0:33,0:33:96.33:0,96,1854	0/0:39,0:39:99:0,114,2136	0/0:30,0:30:90.31:0,90,1730	0/0:20,0:20:60.05:0,60,583	0/0:11,0:11:33.02:0,33,310	1/1:14,0:14:40.43:361,40,0	1/1:33,1:35:77.32:534,77,0	1/1:34,0:35:80.08:664,80,0	0/0:20,0:20:60.21:0,60,1158	0/0:20,0:20:12.61:0,13,432	0/0:28,0:28:78.02:0,78,711	0/0:29,0:29:87.30:0,87,1680	1/1:22,0:22:50.33:334,50,0	1/1:32,2:31:82.93:639,83,0	1/1:16,0:16:40.14:246,40,0
chr10	69747041	.	GCAGAGTGTT	G	16319.25	PASS	AB=0.581;AC=25;AF=0.446;AN=56;BaseQRankSum=18.277;DP=642;FS=0.321;HRun=0;HaplotypeScore=205.1379;InbreedingCoeff=0.9218;MQ=83.79;MQ0=0;MQRankSum=-17.518;QD=64.76;ReadPosRankSum=-0.890;VQSLOD=3.9121;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,14:19:36.12:1086,36,0	0/0:12,0:12:36.12:0,36,1596	0/0:17,0:18:41.41:0,41,1820	0/0:29,0:29:75.25:0,75,3060	1/1:3,23:26:57.07:1512,57,0	0/0:28,0:28:78.25:0,78,3624	0/0:29,0:29:84.29:0,84,3893	1/1:4,25:29:75.22:2136,75,0	0/0:22,0:22:57.20:0,57,2599	0/0:27,0:27:75.24:0,75,3340	0/0:30,0:30:87.28:0,87,4042	0/0:35,0:35:99:0,102,4559	0/0:25,0:25:69.22:0,69,3107	0/0:29,0:29:87.27:0,87,3862	0/0:38,0:37:99:0,111,4982	0/0:29,0:29:87.28:0,87,3961	1/1:2,21:23:51.18:1516,51,0	1/1:1,4:5:12.04:363,12,0	1/1:6,8:14:24.03:548,24,0	1/1:1,32:33:93.32:2814,93,0	1/1:6,7:13:18.06:464,18,0	0/0:17,0:17:45.15:0,45,2138	1/1:1,14:15:33.11:998,33,0	1/1:4,12:16:27.56:817,28,0	0/0:22,0:22:63.20:0,63,2849	0/1:5,13:18:97.96:1163,0,98	1/1:2,24:26:63.22:1902,63,0	1/1:0,15:15:33.11:999,33,0
chr10	69747141	.	A	AC	12038.42	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=20.734;DP=718;FS=2.775;HRun=2;HaplotypeScore=115.2479;InbreedingCoeff=0.9956;MQ=88.25;MQ0=0;MQRankSum=-3.713;QD=37.27;ReadPosRankSum=0.795;VQSLOD=4.5387;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:84.04:1133,84,0	0/0:10,0:10:27.08:0,27,335	0/0:27,0:27:70.77:0,71,845	0/0:26,0:26:75.22:0,75,918	1/1:8,11:19:51.14:692,51,0	0/0:29,0:29:78.25:0,78,967	0/0:27,0:27:78.22:0,78,941	1/1:3,29:32:87.25:1212,87,0	0/0:24,0:24:69.22:0,69,855	0/0:34,0:34:99:0,102,1246	0/0:19,0:19:57.17:0,57,695	0/0:26,0:26:75.23:0,75,918	0/0:35,0:35:99:0,99,1210	0/0:26,0:26:72.16:0,72,860	0/0:29,0:29:84.22:0,84,1012	0/0:26,0:26:78.25:0,78,967	1/1:0,30:30:84.20:1182,84,0	1/1:0,11:11:33.11:474,33,0	1/1:2,24:26:72.24:1015,72,0	1/1:3,25:28:72.24:1034,72,0	1/1:2,37:39:99:1455,105,0	0/0:35,0:35:93.24:0,93,1140	1/1:0,19:19:51.17:732,51,0	1/1:1,23:24:63.21:896,63,0	0/0:22,0:22:63.20:0,63,781	1/1:3,25:28:46.89:1008,47,0	1/1:3,23:27:72.24:1033,72,0	1/1:3,4:7:12.04:173,12,0
chr10	69747371	.	G	GT	5052.35	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=16.437;DP=621;FS=0.660;HRun=1;HaplotypeScore=99.1923;InbreedingCoeff=0.9985;MQ=85.17;MQ0=0;MQRankSum=-3.260;QD=17.30;ReadPosRankSum=1.706;VQSLOD=5.1816;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,2:37:78.23:361,78,0	0/0:9,0:9:27.09:0,27,378	0/0:22,0:22:57.07:0,57,734	0/0:20,0:20:52.65:0,53,656	1/1:3,1:22:26.93:146,27,0	0/0:21,0:21:63.17:0,63,856	0/0:27,0:27:78.26:0,78,1082	1/1:4,19:24:59.21:621,59,0	0/0:16,0:16:48.16:0,48,671	0/0:31,0:31:93.31:0,93,1297	0/0:23,0:23:69.21:0,69,943	0/0:16,0:16:48.15:0,48,650	0/0:22,0:22:66.17:0,66,882	0/0:17,0:17:51.17:0,51,711	0/0:25,0:25:72.23:0,72,990	0/0:30,0:30:90.30:0,90,1255	1/1:2,0:27:47.53:210,48,0	1/1:1,2:15:32.74:170,33,0	1/1:3,16:19:34.17:341,34,0	1/1:3,17:21:23.82:479,24,0	1/1:1,20:21:48.63:545,49,0	0/0:28,0:28:84.26:0,84,1139	1/1:2,1:21:33.36:160,33,0	1/1:3,0:10:19.56:104,20,0	0/0:22,0:22:63.21:0,63,881	1/1:5,21:27:59.16:626,59,0	1/1:5,20:25:61.51:695,62,0	1/1:3,20:23:52.99:594,53,0
chr10	69747757	.	TATAG	T	1016.34	PASS	AB=0.789;AC=5;AF=0.096;AN=52;BaseQRankSum=5.100;DP=709;FS=16.362;HRun=0;HaplotypeScore=126.1680;InbreedingCoeff=0.5993;MQ=59.41;MQ0=8;MQRankSum=0.303;QD=12.10;ReadPosRankSum=1.844;VQSLOD=1.9234;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:30:18.06:0,18,314	0/0:15,0:15:24.07:0,24,515	./.	./.	0/0:36,0:37:14.74:0,15,193	0/0:19,0:19:24.08:0,24,555	0/1:11,4:15:40.21:40,0,64	0/0:50,0:50:4.21:0,4,23	0/0:14,0:14:18.05:0,18,375	0/0:29,0:30:33.11:0,33,756	0/0:18,0:18:24.08:0,24,532	0/0:19,0:19:27.09:0,27,610	0/0:23,0:23:33.11:0,33,739	0/0:21,0:21:21.07:0,21,481	1/1:14,13:26:30.10:459,30,0	0/0:25,0:25:2.74:0,3,477	0/0:26,0:28:45.94:0,46,851	0/0:18,0:25:37.59:0,38,509	0/0:14,0:14:9.03:0,9,210	0/0:28,0:28:42.13:0,42,899	0/0:18,0:19:30.06:0,30,607	0/0:28,0:28:42.13:0,42,861	0/0:17,0:29:2.71:0,3,45	0/0:30,0:30:21.02:0,21,313	1/1:22,20:42:42.14:643,42,0	0/0:28,0:28:51.15:0,51,1121	0/0:36,0:36:57.15:0,57,1265	0/0:17,0:17:21.07:0,21,490
chr10	69748187	.	TTTGCC	T	10012.52	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.229;DP=746;FS=11.947;HRun=0;HaplotypeScore=146.9335;InbreedingCoeff=1.0000;MQ=85.36;MQ0=0;MQRankSum=-9.206;QD=63.37;ReadPosRankSum=1.370;VQSLOD=5.5753;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,163,5131	0/0:12,0:12:36.12:0,36,1187	0/0:28,0:28:65.90:0,66,2410	0/0:21,0:21:63:0,63,1739	0/0:25,0:25:75.24:0,75,2400	0/0:25,0:25:75.26:0,75,2498	0/0:33,0:33:99:0,99,3181	1/1:0,26:26:78.27:1793,78,0	0/0:22,0:22:66.22:0,66,2099	0/0:31,0:31:93.31:0,93,2916	0/0:20,0:20:60.21:0,60,1998	0/0:23,0:23:69.24:0,69,2293	0/0:25,0:25:75.24:0,75,2397	0/0:28,0:28:84.29:0,84,2767	0/0:33,0:33:99:0,99,3129	0/0:29,0:29:87.30:0,87,2898	0/0:37,0:37:99:0,108,3560	0/0:23,0:23:66.23:0,66,2177	1/1:0,22:22:66.21:1431,66,0	1/1:0,14:14:39.13:877,39,0	1/1:0,31:31:78.27:1794,78,0	0/0:29,0:29:87.25:0,87,2645	0/0:21,0:21:60.15:0,60,1759	0/0:46,0:46:99:0,138,4506	0/0:23,0:23:69.23:0,69,2165	1/1:0,22:22:66.23:1536,66,0	1/1:0,27:27:63:1464,63,0	1/1:0,16:16:48.16:1118,48,0
chr10	69748782	.	TG	T	7254.98	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=17.714;DP=652;FS=42.422;HRun=1;HaplotypeScore=85.7875;InbreedingCoeff=0.9990;MQ=81.91;MQ0=0;MQRankSum=-2.446;QD=39.64;ReadPosRankSum=1.438;VQSLOD=1.9078;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1583	0/0:9,0:9:27.09:0,27,430	0/0:19,0:19:32.92:0,33,710	0/0:21,0:21:51.16:0,51,717	0/0:29,0:29:72.25:0,72,1150	0/0:26,0:26:75.24:0,75,1173	0/0:21,0:21:63.21:0,63,1007	1/1:0,23:23:67.47:923,67,0	0/0:14,0:14:42.14:0,42,671	0/0:28,0:28:84.28:0,84,1320	0/0:24,0:24:69.24:0,69,1094	0/0:17,0:17:51.17:0,51,815	0/0:25,0:25:75.26:0,75,1197	0/0:29,0:29:87.30:0,87,1389	0/0:22,0:22:66.21:0,66,1031	0/0:24,0:24:72.23:0,72,1118	0/0:27,0:27:81.28:0,81,1291	0/0:19,0:19:54.18:0,54,863	1/1:0,20:20:57.19:797,57,0	1/1:0,37:37:99:1425,102,0	1/1:0,30:30:81.27:1132,81,0	0/0:17,0:17:51.17:0,51,815	0/0:21,0:21:60.20:0,60,958	0/0:19,0:19:54.18:0,54,863	0/0:25,0:25:72.25:0,72,1150	1/1:0,31:31:93.31:1300,93,0	1/1:0,35:35:99:1384,99,0	1/1:0,7:7:21.07:294,21,0
chr10	69749043	.	C	CA	161.88	PASS	AC=14;AF=0.318;AN=44;BaseQRankSum=2.306;DP=292;FS=0.000;HRun=0;HaplotypeScore=53.2182;InbreedingCoeff=0.7863;MQ=76.90;MQ0=7;MQRankSum=0.229;QD=9.52;ReadPosRankSum=-4.723;VQSLOD=2.2122;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:3:26,3,0	0/0:9,0:9:27.09:0,27,375	0/0:25,0:13:35.67:0,36,442	0/0:38,0:15:26.27:0,26,355	1/1:1,0:1:2.98:22,3,0	0/0:13,0:13:39.12:0,39,528	0/0:20,0:20:54.17:0,54,737	1/1:3,0:3:9.01:85,9,0	0/0:16,0:16:39.13:0,39,545	0/0:28,0:28:81.24:0,81,1076	0/0:16,0:16:45.13:0,45,594	0/0:7,0:7:18.06:0,18,251	0/0:20,0:19:42.12:0,42,555	0/0:21,0:21:54.15:0,54,716	0/0:8,0:8:18.06:0,18,251	0/0:14,0:14:36.09:0,36,455	./.	./.	./.	1/1:0,2:2:6.01:60,6,0	1/1:1,0:1:3:27,3,0	0/0:13,0:13:33.10:0,33,438	./.	./.	0/0:24,0:24:63.20:0,63,862	./.	1/1:0,5:5:6.01:57,6,0	1/1:0,3:3:3.01:32,3,0
chr10	69750540	.	GCTCTCTCTCTCTCTCTCTCTCT	G	4073.47	PASS	AB=0.611;AC=11;AF=0.204;AN=54;BaseQRankSum=6.177;DP=591;FS=3.655;HRun=0;HaplotypeScore=279.9638;InbreedingCoeff=0.7508;MQ=71.57;MQ0=13;MQRankSum=-4.552;QD=36.70;ReadPosRankSum=0.467;VQSLOD=2.4621;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:19:23.72:0,24,1527	0/0:10,0:10:13.71:0,14,1024	0/0:41,0:27:16.84:0,17,747	0/0:60,0:16:5.72:0,6,407	0/0:14,0:17:30.09:0,30,1690	0/0:17,0:27:49.72:0,50,3861	0/0:17,0:28:33.11:0,33,2423	1/1:25,0:25:2.99:27,3,0	0/0:12,0:15:27.09:0,27,2188	0/0:19,0:19:37.94:0,38,2736	0/0:10,0:10:24.08:0,24,1523	0/0:22,0:22:30.10:0,30,2773	0/0:19,0:20:45.63:0,46,4335	0/0:12,0:14:21.07:0,21,1776	0/0:21,0:21:25.74:0,26,2139	0/0:13,0:19:19.80:0,20,1699	0/0:4,0:20:6.02:0,6,532	0/0:7,0:7:15.05:0,15,650	1/1:21,10:32:27.03:918,27,0	1/1:12,5:17:12.04:701,12,0	./.	0/0:14,0:18:30.09:0,30,1727	0/0:24,0:23:8.49:0,8,344	0/0:30,0:30:23.69:0,24,1346	0/0:18,0:18:34.59:0,35,1854	0/1:4,7:11:99:1027,0,561	1/1:6,9:15:15.05:875,15,0	1/1:7,4:10:9.03:525,9,0
chr10	69750806	.	CTTTCT	C	7188.64	PASS	AB=0.759;AC=26;AF=0.464;AN=56;BaseQRankSum=13.404;DP=751;FS=1.821;HRun=0;HaplotypeScore=143.6169;InbreedingCoeff=0.7999;MQ=60.35;MQ0=17;MQRankSum=-4.662;QD=21.33;ReadPosRankSum=2.625;VQSLOD=4.8206;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,21:34:31.35:604,31,0	0/0:6,0:6:15.05:0,15,410	0/0:68,0:20:6.28:0,6,82	0/0:92,0:28:17.43:0,17,160	1/1:7,20:27:57.19:1050,57,0	0/0:24,0:24:42.14:0,42,1138	0/0:20,0:20:36.11:0,36,892	1/1:12,0:25:4.34:35,4,0	0/1:17,1:18:19.28:19,0,843	0/0:21,0:21:39.12:0,39,949	0/0:31,0:31:63.20:0,63,1571	0/0:21,0:21:51.16:0,51,1371	0/0:29,1:30:16.78:0,17,1794	0/0:17,0:17:39.13:0,39,1080	0/0:16,0:16:36.12:0,36,973	0/0:19,0:19:48.16:0,48,1300	1/1:8,16:24:24.08:444,24,0	1/1:7,18:25:31.66:558,32,0	1/1:13,10:22:29.91:386,30,0	1/1:7,15:22:36.08:626,36,0	1/1:6,7:13:12.04:219,12,0	0/0:20,0:20:42.14:0,42,1130	1/1:13,13:26:35.85:665,36,0	1/1:4,15:19:27.02:462,27,0	0/0:23,1:24:7.75:0,8,1490	0/1:6,18:24:53.35:902,0,53	1/1:8,22:30:54.19:998,54,0	1/1:20,7:27:12.04:222,12,0
chr10	69751162	.	T	TAAGGGCTGTCCTG	15673.79	PASS	AB=0.756;AC=14;AF=0.250;AN=56;BaseQRankSum=-6.698;DP=684;FS=0.814;HRun=0;HaplotypeScore=245.7527;InbreedingCoeff=0.8058;MQ=67.42;MQ0=1;MQRankSum=-12.432;QD=93.86;ReadPosRankSum=-1.826;VQSLOD=4.3689;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.29:0,96,3453	0/0:16,0:16:48.15:0,48,1666	0/0:32,0:31:71.32:0,71,2349	0/0:18,0:16:29.27:0,29,964	0/0:28,0:28:81.25:0,81,2708	0/0:25,0:25:69.24:0,69,2653	0/0:22,0:22:63.17:0,63,2068	1/1:5,1:25:60.08:2706,60,0	0/0:23,0:23:63.20:0,63,2387	0/0:31,0:31:75.26:0,75,2850	0/0:40,0:40:99:0,117,4181	0/0:16,0:16:48.15:0,48,1732	0/0:22,0:22:63.19:0,63,2294	0/0:20,0:20:57.18:0,57,2045	0/0:31,0:31:93.29:0,93,3203	0/0:24,0:24:72.23:0,72,2674	0/1:21,0:21:63.56:64,0,1751	0/0:29,0:29:72.14:0,72,2215	1/1:3,6:19:51.14:2528,51,0	1/1:1,8:17:18.06:1176,18,0	1/1:11,0:11:26.89:726,27,0	0/0:30,0:30:84.25:0,84,2957	0/0:26,0:26:72.13:0,72,2460	0/0:22,0:22:63.16:0,63,2022	0/0:26,0:26:72.24:0,72,2653	0/1:2,16:40:13.53:5534,0,14	1/1:3,11:23:33.11:2155,33,0	1/1:0,4:8:12.04:785,12,0
chr10	69751326	.	T	TA	3960.53	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-1.664;DP=556;FS=4.804;HRun=7;HaplotypeScore=56.3708;InbreedingCoeff=0.9781;MQ=60.26;MQ0=0;MQRankSum=-1.817;QD=29.12;ReadPosRankSum=-1.115;VQSLOD=3.9314;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:69.10:0,69,666	0/0:12,0:12:33.05:0,33,318	0/0:10,0:9:17.54:0,18,196	0/0:11,0:9:17.89:0,18,157	0/0:15,0:15:39.06:0,39,376	0/0:18,0:18:45.54:0,46,436	0/0:35,0:35:90.09:0,90,851	1/1:4,25:29:75.20:883,75,0	0/0:16,0:16:42.07:0,42,405	0/0:35,0:35:78.10:0,78,749	0/0:10,0:10:24.04:0,24,231	0/0:18,0:18:51.08:0,51,492	0/0:14,0:14:36.03:0,36,336	0/0:18,0:18:51.08:0,51,492	0/0:24,0:24:69.11:0,69,666	0/0:24,0:23:57.08:0,57,551	0/0:19,0:19:48.54:0,49,464	0/0:18,0:18:39.06:0,39,377	1/1:1,17:18:48.13:567,48,0	1/1:1,13:14:36.11:435,36,0	1/1:0,16:16:36.11:435,36,0	0/0:20,0:20:60.08:0,60,573	0/0:17,0:17:45.05:0,45,428	0/0:21,0:21:54.08:0,54,521	0/0:35,0:35:99:0,102,973	1/1:5,21:26:8.24:665,8,0	1/1:1,25:26:69.21:831,69,0	1/1:2,5:7:12.04:145,12,0
chr10	69751481	.	T	TCG	2707.70	PASS	AB=0.942;AC=22;AF=0.393;AN=56;BaseQRankSum=11.244;DP=615;FS=7.460;HRun=0;HaplotypeScore=143.0657;InbreedingCoeff=0.6986;MQ=62.27;MQ0=1;MQRankSum=-1.626;QD=9.81;ReadPosRankSum=1.277;VQSLOD=3.1832;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:38:35.28:375,35,0	0/0:17,0:17:45.13:0,45,565	0/0:10,0:7:6.99:0,7,27	0/0:13,0:10:3.73:0,4,16	1/1:20,0:20:4.97:52,5,0	0/0:20,0:20:33.04:0,33,390	0/0:41,0:41:96.22:0,96,1144	0/1:15,0:15:4.30:38,0,4	0/0:18,0:18:51.12:0,51,613	0/0:22,0:22:57.18:0,57,721	0/0:21,0:21:57.15:0,57,691	0/0:29,0:29:75.24:0,75,962	0/0:31,0:31:69.17:0,69,881	0/0:27,0:27:69.21:0,69,871	0/0:25,0:25:60.15:0,60,723	0/0:13,0:13:30.10:0,30,386	1/1:19,17:36:35.41:797,35,0	1/1:9,5:14:21.04:315,21,0	1/1:14,0:14:23.42:175,23,0	0/1:7,3:10:0:0,0,0	0/1:23,0:23:16.36:36,0,16	0/0:24,0:24:51.11:0,51,624	1/1:14,15:29:28.41:408,28,0	1/1:6,24:30:25.48:439,25,0	0/0:27,0:27:75.18:0,75,897	0/1:18,0:18:15.15:134,0,15	1/1:17,0:17:9.05:86,9,0	1/1:12,0:12:6:54,6,0
chr10	69751482	.	C	CGT	1687.22	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=11.902;DP=624;FS=4.911;HRun=0;HaplotypeScore=151.3120;InbreedingCoeff=0.2902;MQ=60.78;MQ0=1;MQRankSum=-4.783;QD=7.50;ReadPosRankSum=2.433;VQSLOD=3.1055;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,29:43:38.38:675,38,0	0/0:18,0:18:51.09:0,51,724	0/0:9,0:6:10.10:0,10,45	0/1:13,0:9:4.97:5,0,16	1/1:8,16:24:11.89:145,12,0	0/0:20,0:20:42.09:0,42,569	0/0:40,0:40:99:0,108,1538	0/0:14,0:14:21.10:0,21,182	0/0:19,0:19:54.17:0,54,798	0/0:22,0:22:66.13:0,66,935	0/0:22,0:22:60.17:0,60,882	0/0:29,0:29:87.21:0,87,1239	0/0:30,0:30:84.09:0,84,1159	0/0:28,0:28:75.20:0,75,1095	0/0:24,0:24:69.19:0,69,985	0/0:14,0:14:33.10:0,33,483	0/1:36,0:36:25.23:388,0,25	0/1:14,0:14:58.04:143,0,58	0/1:16,0:16:12.63:13,0,54	0/0:10,0:10:14.52:0,15,109	0/0:21,0:21:23.11:0,23,204	0/0:24,0:24:66.13:0,66,888	0/1:31,0:31:36.31:233,0,36	1/1:30,0:30:7.43:229,7,0	0/0:28,0:28:78.21:0,78,1158	0/1:18,0:18:14.29:14,0,102	0/0:16,0:16:1.35:0,1,138	0/0:11,0:11:0.46:0,0,106
chr10	69751492	.	T	TGC	2355.25	PASS	AB=0.922;AC=16;AF=0.286;AN=56;BaseQRankSum=11.369;DP=601;FS=8.913;HRun=0;HaplotypeScore=141.1261;InbreedingCoeff=0.5404;MQ=56.95;MQ0=4;MQRankSum=-2.503;QD=11.06;ReadPosRankSum=0.086;VQSLOD=3.1109;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:35.29:394,35,0	0/0:19,0:19:57.18:0,57,837	0/0:16,1:5:6.56:0,7,55	0/0:20,0:7:3.47:0,3,26	1/1:27,0:26:4.73:46,5,0	0/0:17,0:17:36.11:0,36,526	0/0:46,0:46:99:0,123,1757	0/0:11,0:10:7.15:0,7,94	0/0:23,0:23:63.13:0,63,906	0/0:22,0:22:60.19:0,60,913	0/0:20,0:20:57.17:0,57,827	0/0:28,0:28:84.21:0,84,1224	0/0:30,0:30:84.23:0,84,1258	0/0:30,0:30:84.28:0,84,1257	0/0:21,0:21:63.15:0,63,868	0/0:17,0:17:45.15:0,45,672	1/1:32,0:32:30.62:760,31,0	1/1:10,0:10:15.52:247,16,0	0/1:12,2:14:85.47:107,0,85	0/0:5,0:5:2.99:0,3,25	0/0:12,0:12:8.97:0,9,72	0/0:21,0:21:54.16:0,54,779	1/1:29,0:29:14.63:398,15,0	1/1:28,0:28:22.47:391,22,0	0/0:29,0:29:84.21:0,84,1190	0/1:16,0:15:49.69:50,0,79	0/1:10,3:13:66.19:100,0,66	0/1:7,0:7:18.76:48,0,19
chr10	69751494	.	T	TGCGC	1962.95	PASS	AB=0.846;AC=22;AF=0.393;AN=56;BaseQRankSum=12.812;DP=614;FS=1.445;HRun=0;HaplotypeScore=166.6097;InbreedingCoeff=0.6536;MQ=56.61;MQ0=5;MQRankSum=-1.845;QD=7.44;ReadPosRankSum=-1.395;VQSLOD=2.8735;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:39:27.58:142,28,0	0/0:19,0:19:57.18:0,57,1099	0/1:17,0:5:8.51:9,0,62	0/0:19,0:6:2.80:0,3,13	0/1:29,0:28:2.83:4,0,3	0/0:19,0:19:39.10:0,39,708	0/0:49,0:49:99:0,126,2283	1/1:11,0:10:8.24:59,8,0	0/0:23,0:23:60.17:0,60,1159	0/0:23,0:23:59.82:0,60,1176	0/0:18,0:18:51.17:0,51,1003	0/0:29,0:29:87.26:0,87,1649	0/0:30,0:30:84.26:0,84,1648	0/0:31,0:31:87.28:0,87,1652	0/0:20,0:20:54.19:0,54,1031	0/0:18,0:18:51.14:0,51,946	1/1:33,0:33:32.63:407,33,0	1/1:11,0:11:18.89:169,19,0	1/1:14,0:14:16.07:278,16,0	0/1:5,0:5:0.01:0,0,0	0/1:2,5:10:0:0,0,0	0/0:21,0:21:60.18:0,60,1095	0/1:29,0:29:7.96:182,0,8	1/1:28,0:28:26.39:232,26,0	0/0:31,0:31:87.20:0,87,1511	0/1:4,10:15:39.52:246,0,40	1/1:13,0:13:28.29:274,28,0	1/1:1,6:7:6.02:155,6,0
chr10	69751512	.	CACAA	C	542.78	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=4.438;DP=701;FS=1.892;HRun=0;HaplotypeScore=182.9679;InbreedingCoeff=-0.0736;MQ=52.90;MQ0=11;MQRankSum=-0.624;QD=2.40;ReadPosRankSum=-8.968;VQSLOD=0.4083;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:44,2:46:5.04:153,5,0	0/0:17,0:17:51.14:0,51,1127	0/0:29,0:5:10.53:0,11,125	0/0:30,0:9:17.53:0,18,278	0/0:30,3:31:1.28:0,1,15	0/0:23,0:23:34.54:0,35,756	0/0:47,0:47:99:0,105,1621	0/1:25,0:24:99:144,0,165	0/0:25,0:25:47.98:0,48,1227	0/0:23,0:22:65.05:0,65,1272	0/0:17,0:17:45.10:0,45,961	0/0:32,0:32:91.54:0,92,1789	0/0:33,0:33:92.73:0,93,1838	0/0:31,0:31:90.20:0,90,2022	0/0:19,0:19:57.12:0,57,1230	0/0:20,0:20:60.20:0,60,1528	0/0:34,0:34:55.42:0,55,713	0/0:19,0:19:32.74:0,33,410	0/1:14,0:13:67.42:67,0,168	0/1:12,0:12:25.60:60,0,26	0/1:18,0:18:8:8,0,99	0/0:17,0:17:48.11:0,48,1008	0/1:28,0:28:16.90:17,0,150	0/1:34,0:34:25.30:25,0,209	0/0:26,0:26:78.22:0,78,1735	0/1:22,0:20:99:110,0,238	0/1:18,0:18:70.83:71,0,169	0/1:9,0:9:32.91:33,0,89
chr10	69751516	.	A	AAC	1889.36	PASS	AB=0.866;AC=16;AF=0.286;AN=56;BaseQRankSum=2.841;DP=730;FS=2.254;HRun=0;HaplotypeScore=162.9953;InbreedingCoeff=0.4236;MQ=53.78;MQ0=12;MQRankSum=-3.606;QD=6.49;ReadPosRankSum=-2.833;VQSLOD=3.1990;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:3.83:0,4,27	0/0:18,0:18:39.12:0,39,467	0/0:32,0:7:11.57:0,12,94	0/0:31,0:10:18.50:0,18,200	0/0:33,0:31:2.97:0,3,27	0/1:7,16:23:2.86:436,0,3	1/1:16,36:52:33.43:1010,33,0	1/1:26,0:25:1.31:42,1,0	0/0:22,0:25:53.66:0,54,581	0/0:28,0:27:48.93:0,49,614	0/0:14,0:18:32.92:0,33,362	0/0:31,0:31:61.41:0,61,740	0/0:30,0:31:77.57:0,78,870	0/0:32,0:32:78.18:0,78,916	0/0:20,0:20:54.17:0,54,646	0/0:20,0:20:60.18:0,60,717	1/1:20,0:40:22.27:159,22,0	1/1:7,0:23:12.90:100,13,0	0/1:18,0:15:32.64:42,0,33	0/0:12,0:12:3.21:0,3,13	0/0:18,0:18:9.01:0,9,52	0/0:15,0:17:35.93:0,36,397	0/1:10,0:28:3.88:84,0,4	1/1:31,0:34:7.85:59,8,0	0/0:27,0:27:63.02:0,63,733	0/1:20,0:18:38.58:39,0,39	0/1:17,0:17:17.93:59,0,18	0/1:10,0:10:6.30:34,0,6
chr10	69751801	.	G	GGA	4428.38	PASS	AB=0.605;AC=11;AF=0.196;AN=56;BaseQRankSum=11.325;DP=756;FS=3.359;HRun=0;HaplotypeScore=120.9858;InbreedingCoeff=0.8571;MQ=81.58;MQ0=3;MQRankSum=-2.215;QD=26.20;ReadPosRankSum=1.781;VQSLOD=5.8792;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,29:46:20.06:1239,0,20	0/0:9,0:9:24.08:0,24,297	0/0:40,0:37:57.11:0,57,673	0/0:39,0:35:40.97:0,41,501	1/1:6,13:20:5.09:599,5,0	0/0:17,0:18:50.99:0,51,609	0/0:32,0:32:72.23:0,72,893	0/0:34,0:34:69.21:0,69,845	0/0:29,0:29:78.22:0,78,953	0/0:29,0:30:69.05:0,69,832	0/0:10,0:10:21.06:0,21,250	0/0:34,0:34:75.24:0,75,930	0/0:30,0:30:66.21:0,66,816	0/0:34,0:34:87.26:0,87,1066	0/0:34,1:35:41.05:0,41,1018	0/0:28,0:28:69.22:0,69,856	1/1:29,0:29:69.20:794,69,0	1/1:14,0:14:26.99:284,27,0	0/0:22,0:22:57.17:0,57,696	0/0:18,0:18:39.12:0,39,483	0/0:38,0:38:93.28:0,93,1140	0/0:16,0:16:39.11:0,39,470	1/1:22,0:22:42.05:533,42,0	1/1:38,0:36:87.25:980,87,0	0/0:21,0:21:54.17:0,54,670	0/0:28,0:28:63.20:0,63,781	0/0:31,0:31:81.25:0,81,1003	0/0:11,0:11:24.07:0,24,297
chr10	69751812	.	G	GAT	5209.59	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=8.578;DP=724;FS=3.223;HRun=0;HaplotypeScore=114.6484;InbreedingCoeff=0.7551;MQ=81.93;MQ0=3;MQRankSum=-0.791;QD=31.38;ReadPosRankSum=4.889;VQSLOD=7.1010;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:48,0:48:99:555,0,223	0/0:9,0:9:24.08:0,24,364	0/0:32,0:30:80.37:0,80,1093	0/0:39,0:35:64.37:0,64,843	0/1:20,0:20:68.38:312,0,68	0/0:18,0:18:54.10:0,54,776	0/0:29,0:29:84.18:0,84,1191	0/0:31,0:31:90.26:0,90,1249	0/0:31,0:31:90.25:0,90,1288	0/0:28,0:28:81.18:0,81,1141	0/0:8,0:8:21.06:0,21,301	0/0:29,0:29:78.25:0,78,1161	0/0:31,0:31:87.20:0,87,1182	0/0:32,0:32:90.29:0,90,1352	0/0:32,0:32:69.04:0,69,1327	0/0:29,0:29:87.21:0,87,1203	1/1:1,27:28:69.24:1316,69,0	1/1:2,11:13:30.10:544,30,0	0/0:27,0:27:75.19:0,75,1028	0/0:14,0:14:39.13:0,39,594	0/0:35,0:35:99:0,99,1461	0/0:14,0:14:42.13:0,42,618	1/1:0,19:20:42.06:806,42,0	1/1:1,36:35:87.30:1676,87,0	0/0:23,0:23:69.17:0,69,950	0/0:23,0:23:69.22:0,69,1018	0/0:32,0:32:96.22:0,96,1352	0/0:11,0:11:30.06:0,30,413
chr10	69752013	.	C	CCTG	1046.42	PASS	AB=1.000;AC=12;AF=0.400;AN=30;BaseQRankSum=2.651;DP=543;FS=10.033;HRun=0;HaplotypeScore=88.7323;InbreedingCoeff=0.6435;MQ=77.70;MQ0=5;MQRankSum=-3.810;QD=6.16;ReadPosRankSum=-1.975;VQSLOD=1.2268;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:0:0,0,0	./.	./.	./.	0/1:21,0:19:0:0,0,0	./.	0/0:19,0:27:5.95:0,6,42	./.	0/0:24,0:24:36.10:0,36,449	./.	./.	0/0:30,0:32:45.09:0,45,546	0/0:19,0:20:24.02:0,24,276	0/0:31,0:31:39.11:0,39,489	0/0:22,0:24:36.04:0,36,413	0/0:18,0:18:21.07:0,21,271	1/1:23,3:35:6.24:345,6,0	1/1:14,0:16:9.03:117,9,0	./.	./.	./.	./.	./.	1/1:17,3:29:15.73:265,16,0	./.	0/1:13,0:11:0:0,0,0	1/1:12,11:26:20.94:397,21,0	0/1:9,0:9:32.68:43,0,33
chr10	69752452	.	A	ACGCA	1150.57	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=4.969;DP=523;FS=4.935;HRun=0;HaplotypeScore=106.9448;InbreedingCoeff=0.5855;MQ=52.80;MQ0=29;MQRankSum=-1.578;QD=5.64;ReadPosRankSum=-2.672;VQSLOD=1.6783;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:23:36.27:343,36,0	0/0:5,0:5:12.03:0,12,176	0/0:19,0:5:6.01:0,6,59	0/0:19,0:6:9.01:0,9,86	1/1:26,0:23:11.43:103,11,0	0/0:22,0:20:44.50:0,44,719	0/0:33,0:32:74.18:0,74,1037	0/0:27,0:22:8.51:0,9,235	0/0:17,0:16:30.06:0,30,447	0/0:22,0:22:57.09:0,57,789	0/0:9,0:9:15.02:0,15,209	0/0:17,0:16:35.86:0,36,472	0/0:15,0:15:36.04:0,36,564	0/0:24,0:24:48.08:0,48,679	0/0:14,0:14:33:0,33,450	0/0:21,0:21:57.06:0,57,721	1/1:18,12:28:14.68:177,15,0	1/1:16,0:15:23.82:319,24,0	0/1:19,0:17:23.05:23,0,103	0/1:10,0:9:33.94:34,0,38	0/0:14,0:12:11.99:0,12,100	0/0:16,0:15:39.07:0,39,560	1/1:21,0:20:8.88:96,9,0	1/1:26,0:23:14.74:194,15,0	0/0:15,0:15:42.05:0,42,522	0/1:13,0:12:37.98:38,0,109	0/1:5,0:5:12:12,0,36	0/0:10,0:10:18.70:0,19,125
chr10	69752527	.	A	AG	229.94	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.383;DP=482;FS=0.000;HRun=7;HaplotypeScore=67.7026;InbreedingCoeff=0.8840;MQ=75.24;MQ0=12;MQRankSum=1.242;QD=6.97;ReadPosRankSum=-1.145;VQSLOD=0.0283;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:9:9.03:109,9,0	0/0:2,0:2:6.01:0,6,58	0/0:38,0:20:43.13:0,43,414	0/0:36,0:23:34.76:0,35,344	1/1:3,8:8:23.87:235,24,0	0/0:23,0:22:59.71:0,60,556	0/0:27,0:27:69.04:0,69,650	0/0:27,0:27:55.98:0,56,513	0/0:6,0:6:15.02:0,15,145	0/0:18,0:18:54.08:0,54,518	0/0:16,0:15:35.79:0,36,347	0/0:17,0:17:38.98:0,39,364	0/0:14,0:14:33.05:0,33,318	0/0:19,0:19:47.77:0,48,462	0/0:22,0:22:53.59:0,54,520	0/0:15,0:14:29.53:0,30,283	0/0:19,0:19:39.04:0,39,367	0/0:17,0:17:36.05:0,36,347	0/0:14,0:13:30.03:0,30,284	0/0:6,0:6:15.02:0,15,144	0/0:9,0:9:11.88:0,12,93	0/0:14,0:13:30.04:0,30,288	0/0:16,0:15:38.79:0,39,334	0/0:16,0:16:20.25:0,20,164	0/0:14,0:14:38.65:0,39,371	0/0:17,0:16:36.06:0,36,347	0/0:12,0:12:33.05:0,33,318	0/0:15,0:15:36.03:0,36,342
chr10	69752830	.	A	AT	1587.38	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.516;DP=515;FS=12.913;HRun=3;HaplotypeScore=75.3471;InbreedingCoeff=0.9260;MQ=80.80;MQ0=0;MQRankSum=-1.393;QD=31.13;ReadPosRankSum=-0.267;VQSLOD=2.2380;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:72.23:932,72,0	0/0:5,0:5:15.05:0,15,178	0/0:15,0:15:18.85:0,19,324	0/0:17,0:16:40.66:0,41,432	1/1:1,23:24:63.09:777,63,0	0/0:22,0:22:66.19:0,66,779	0/0:16,0:16:48.14:0,48,565	0/0:31,0:31:54.07:0,54,349	0/0:15,0:15:42.13:0,42,502	0/0:19,0:19:57.17:0,57,675	0/0:23,0:23:66.19:0,66,781	0/0:13,0:13:39.12:0,39,463	0/0:17,0:17:51.11:0,51,573	0/0:14,0:14:42.11:0,42,485	0/0:26,0:26:75.20:0,75,873	0/0:16,0:16:45.14:0,45,538	0/0:20,0:20:37.56:0,38,212	0/0:15,0:15:42.09:0,42,225	0/0:18,0:18:39.85:0,40,204	0/0:22,0:22:64.06:0,64,384	0/0:11,0:11:5.05:0,5,110	0/0:14,0:14:39.11:0,39,455	0/0:18,0:18:45.87:0,46,242	0/0:12,0:12:19.48:0,19,141	0/0:32,0:32:96.17:0,96,1094	0/0:20,0:20:53.93:0,54,264	0/0:19,0:18:42.61:0,43,243	0/0:14,0:14:40.60:0,41,227
chr10	69753193	.	TA	T	5485.57	PASS	AB=0.941;AC=21;AF=0.375;AN=56;BaseQRankSum=10.079;DP=641;FS=2.684;HRun=10;HaplotypeScore=81.1801;InbreedingCoeff=0.9344;MQ=74.98;MQ0=0;MQRankSum=-1.059;QD=20.17;ReadPosRankSum=3.684;VQSLOD=5.7345;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,1439	0/0:9,0:9:27.07:0,27,297	0/1:15,1:15:3.46:3,0,169	0/0:20,0:17:29.99:0,30,289	0/0:36,0:36:73.20:0,73,1024	0/0:19,0:19:51.14:0,51,564	0/0:24,0:24:34.56:0,35,597	0/0:26,0:28:59.82:0,60,619	0/0:15,1:16:13.03:0,13,354	0/0:14,1:15:13.05:0,13,372	0/0:17,0:19:53.91:0,54,553	0/0:23,0:23:57.13:0,57,621	0/0:19,0:19:54.11:0,54,573	0/0:18,1:19:25.07:0,25,496	0/0:22,0:22:54.15:0,54,597	0/0:13,0:14:41.93:0,42,438	1/1:11,37:48:99:1004,117,0	1/1:2,22:24:65.97:569,66,0	1/1:4,9:13:26.96:230,27,0	1/1:3,23:26:68.98:599,69,0	1/1:1,19:20:44.99:391,45,0	0/0:23,0:23:57.14:0,57,622	1/1:0,27:27:74.95:647,75,0	1/1:2,23:25:65.98:573,66,0	0/0:17,0:17:48.12:0,48,523	1/1:4,26:30:11.61:559,12,0	1/1:2,24:26:62.98:547,63,0	1/1:0,17:17:41.99:364,42,0
chr10	69753288	.	CATT	C	4276.73	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.220;DP=677;FS=6.417;HRun=0;HaplotypeScore=100.0271;InbreedingCoeff=0.9993;MQ=77.10;MQ0=0;MQRankSum=-1.802;QD=43.20;ReadPosRankSum=4.045;VQSLOD=6.3303;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,2342	0/0:8,0:8:24.08:0,24,591	0/0:13,0:13:32.33:0,32,819	0/0:19,0:19:54.14:0,54,1213	0/0:30,0:30:90.29:0,90,2094	0/0:24,0:24:72.25:0,72,1750	0/0:30,0:30:90.31:0,90,2161	0/0:28,0:28:81.26:0,81,1882	0/0:25,0:25:75.24:0,75,1769	0/0:34,0:34:99:0,102,2377	0/0:21,0:21:63.20:0,63,1464	0/0:25,0:25:75.22:0,75,1716	0/0:23,0:23:69.24:0,69,1675	0/0:22,0:22:66.19:0,66,1547	0/0:25,0:25:75.26:0,75,1825	0/0:24,0:24:72.23:0,72,1724	1/1:0,35:35:78.18:1378,78,0	1/1:0,25:25:63.21:1171,63,0	0/0:17,0:17:51.14:0,51,1202	0/0:16,0:16:48.16:0,48,1169	0/0:47,0:47:99:0,135,3234	0/0:21,0:21:63.19:0,63,1450	1/1:2,18:20:56.94:967,57,0	1/1:0,19:19:41.92:761,42,0	0/0:17,0:17:51.16:0,51,1207	0/0:33,0:33:99:0,99,2296	0/0:26,0:26:72.25:0,72,1748	0/0:15,0:15:41.99:0,42,855
chr10	69755781	.	CT	C	893.50	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.035;DP=584;FS=2.744;HRun=10;HaplotypeScore=59.0174;InbreedingCoeff=0.8889;MQ=72.59;MQ0=0;MQRankSum=0.701;QD=17.18;ReadPosRankSum=-0.778;VQSLOD=3.8265;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:26:59.97:521,60,0	0/0:2,0:11:22.73:0,23,114	0/0:15,0:14:7.69:0,8,69	0/0:11,0:9:4.28:0,4,31	1/1:7,19:26:56.98:494,57,0	0/0:19,0:19:48.12:0,48,524	0/0:17,0:17:39.11:0,39,431	0/0:27,0:29:60.80:0,61,612	0/0:19,0:19:51.14:0,51,564	0/0:23,0:23:57.15:0,57,631	0/0:12,0:12:36.10:0,36,398	0/0:26,1:27:52.14:0,52,794	0/0:12,0:12:30.06:0,30,316	0/0:17,1:18:22.06:0,22,461	0/0:20,0:20:48.13:0,48,531	0/0:22,0:22:63.17:0,63,697	0/0:31,0:31:81.20:0,81,887	0/0:14,0:14:36.06:0,36,385	0/0:23,0:23:51.11:0,51,542	0/0:29,0:30:69.01:0,69,736	0/0:19,0:19:57.13:0,57,621	0/0:18,1:19:19.07:0,19,438	0/0:14,0:14:33.08:0,33,357	0/0:22,0:22:59.15:0,59,623	0/0:16,1:17:19.04:0,19,421	0/0:33,0:33:87.23:0,87,956	0/0:38,1:39:73.19:0,73,1026	0/0:16,0:16:36.10:0,36,398
chr10	69756002	.	TGCCTCTGAGCCTCTGA	T	1266.52	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.622;DP=577;FS=11.989;HRun=0;HaplotypeScore=239.5934;InbreedingCoeff=0.8950;MQ=77.52;MQ0=0;MQRankSum=-6.251;QD=17.59;ReadPosRankSum=-1.568;VQSLOD=1.0148;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:35:39.13:0,39,695	0/0:4,0:9:12.04:0,12,195	0/0:21,0:20:30.10:0,30,1222	0/0:25,0:24:30.05:0,30,1365	0/0:15,0:25:30.08:0,30,491	0/0:24,0:24:54.16:0,54,3467	0/0:16,0:16:30.09:0,30,1746	0/0:14,0:14:18.04:0,18,307	0/0:25,0:25:63.17:0,63,3270	0/0:30,0:30:54.17:0,54,3475	0/0:17,0:17:48.15:0,48,3124	0/0:22,0:22:45.14:0,45,2592	0/0:20,0:20:54.16:0,54,3273	0/0:25,0:25:69.23:0,69,4668	0/0:19,0:19:48.15:0,48,2948	0/0:24,0:24:54.19:0,54,3853	1/1:8,12:20:11.96:416,12,0	1/1:7,10:17:6.02:209,6,0	0/0:21,0:21:42.13:0,42,2573	0/0:23,0:23:57.17:0,57,2946	0/0:18,0:18:39.08:0,39,2380	0/0:15,0:15:30.09:0,30,1721	1/1:4,12:16:24.08:712,24,0	1/1:10,9:19:3.01:71,3,0	0/0:19,0:19:57.20:0,57,3874	0/0:21,0:21:39.13:0,39,2688	0/0:26,0:26:60.21:0,60,4412	0/0:11,0:11:24.05:0,24,1623
chr10	69757723	.	AGAGGAG	A	2961.07	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.159;DP=771;FS=7.460;HRun=0;HaplotypeScore=174.9217;InbreedingCoeff=0.9990;MQ=71.82;MQ0=0;MQRankSum=-8.998;QD=35.25;ReadPosRankSum=0.412;VQSLOD=2.9539;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,144,4557	0/0:19,0:19:45.15:0,45,1432	0/0:25,0:22:41.15:0,41,899	0/0:20,0:17:25.64:0,26,678	0/0:24,0:24:57.20:0,57,1795	0/0:18,0:18:36.12:0,36,1127	0/0:27,0:27:71.43:0,71,1974	0/0:14,0:14:27.09:0,27,863	0/0:38,0:38:96.33:0,96,3075	0/0:30,0:30:72.25:0,72,2317	0/0:22,0:22:45.15:0,45,1459	0/0:36,0:36:90.29:0,90,2836	0/0:30,0:30:78.25:0,78,2427	0/0:30,0:30:84.29:0,84,2796	0/0:40,0:40:96.30:0,96,3036	0/0:30,0:30:81.24:0,81,2482	1/1:12,8:20:30.10:636,30,0	1/1:13,9:21:33.11:706,33,0	0/0:21,0:21:48.16:0,48,1582	0/0:35,0:35:81.28:0,81,2474	0/0:32,0:32:72.23:0,72,2299	0/0:34,0:34:84.29:0,84,2752	1/1:8,13:21:48.16:1024,48,0	1/1:11,10:21:36.12:755,36,0	0/0:33,0:33:75.26:0,75,2443	0/0:24,0:24:69.24:0,69,2227	0/0:31,0:29:87.30:0,87,2569	0/0:18,0:18:42.10:0,42,1335
chr10	69757784	.	AAG	A	13140.45	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=14.932;DP=782;FS=5.575;HRun=0;HaplotypeScore=115.8854;InbreedingCoeff=1.0000;MQ=70.36;MQ0=3;MQRankSum=-2.992;QD=35.32;ReadPosRankSum=3.282;VQSLOD=6.8449;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,47:49:99:1772,129,0	1/1:0,24:24:63.21:866,63,0	0/0:44,0:34:52.25:0,52,1029	0/0:48,0:36:69.92:0,70,1044	1/1:1,21:22:60.20:824,60,0	0/0:27,0:27:78.27:0,78,1377	0/0:25,0:25:72.25:0,72,1277	1/1:7,27:33:81.24:1075,81,0	0/0:36,0:36:99:0,99,1745	0/0:30,0:30:90.30:0,90,1543	0/0:19,0:19:54.18:0,54,945	0/0:25,0:25:75.26:0,75,1328	0/0:18,0:18:51.17:0,51,903	0/0:28,0:28:81.28:0,81,1420	0/0:30,0:30:75.48:0,75,1418	0/0:27,0:27:81.28:0,81,1427	1/1:3,17:20:45.15:618,45,0	1/1:2,16:17:39.13:536,39,0	1/1:2,25:27:65.70:980,66,0	1/1:0,29:29:84.24:1133,84,0	1/1:0,30:30:84.28:1154,84,0	0/0:31,0:31:90.31:0,90,1597	1/1:1,19:20:57.19:782,57,0	1/1:3,14:17:38.89:515,39,0	0/0:21,0:21:60.21:0,60,1055	1/1:1,27:28:81.27:1113,81,0	1/1:1,28:29:72.24:989,72,0	1/1:1,24:25:57.19:783,57,0
chr10	69757895	.	GT	G	244.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.037;DP=697;FS=4.687;HRun=1;HaplotypeScore=69.6981;InbreedingCoeff=0.9992;MQ=84.25;MQ0=0;MQRankSum=-4.307;QD=22.23;ReadPosRankSum=-0.517;VQSLOD=3.4687;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.26:0,75,1193	1/1:4,7:11:30.07:339,30,0	0/0:29,0:29:87.04:0,87,1300	0/0:14,0:14:42:0,42,591	0/0:19,0:19:57.18:0,57,888	0/0:14,0:14:42.14:0,42,671	0/0:35,0:35:99:0,105,1650	0/0:34,0:34:96.33:0,96,1534	0/0:35,0:35:99:0,105,1653	0/0:24,0:24:72.24:0,72,1137	0/0:21,0:21:57.19:0,57,911	0/0:40,0:40:99:0,120,1879	0/0:28,0:28:84.27:0,84,1316	0/0:27,0:27:81.21:0,81,1219	0/0:38,0:38:99:0,114,1815	0/0:36,0:36:99:0,108,1703	0/0:32,0:32:96.33:0,96,1527	0/0:27,0:27:78.27:0,78,1247	0/0:15,0:15:42.14:0,42,669	0/0:28,0:28:84.27:0,84,1310	0/0:36,0:36:99:0,105,1675	0/0:13,0:13:39.13:0,39,624	0/0:13,0:13:39.12:0,39,600	0/0:19,0:19:54.18:0,54,857	0/0:21,0:21:60.20:0,60,951	0/0:16,0:16:48.15:0,48,745	0/0:30,0:30:90.31:0,90,1435	0/0:16,0:15:42.14:0,42,663
chr10	69757898	.	CCAACCTTCT	C	576.87	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.158;DP=698;FS=7.472;HRun=0;HaplotypeScore=186.8866;InbreedingCoeff=0.9985;MQ=84.29;MQ0=0;MQRankSum=-4.203;QD=64.10;ReadPosRankSum=-0.218;VQSLOD=2.6480;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.27:0,78,3671	1/1:2,7:9:26.67:671,27,0	0/0:31,0:31:90.27:0,90,3495	0/0:13,0:13:36.07:0,36,1199	0/0:20,0:20:60.18:0,60,2672	0/0:14,0:14:42.13:0,42,1956	0/0:33,0:33:99:0,99,4591	0/0:32,0:32:96.30:0,96,4187	0/0:35,0:35:99:0,105,4900	0/0:25,0:25:75.26:0,75,3491	0/0:21,0:21:63.22:0,63,2900	0/0:39,0:39:99:0,114,5300	0/0:29,0:29:87.30:0,87,3992	0/0:26,0:26:78.26:0,78,3808	0/0:36,0:36:99:0,108,5134	0/0:37,0:37:99:0,111,5397	0/0:33,0:33:99:0,99,4775	0/0:29,0:29:87.30:0,87,4338	0/0:15,0:15:42.14:0,42,1937	0/0:26,0:26:78.26:0,78,3444	0/0:37,0:37:99:0,108,5250	0/0:13,0:13:39.13:0,39,1821	0/0:13,0:13:39.13:0,39,1696	0/0:21,0:21:60.21:0,60,2905	0/0:22,0:22:66.23:0,66,3039	0/0:15,0:15:45.15:0,45,2162	0/0:31,0:31:90.31:0,90,4269	0/0:17,0:16:45.15:0,45,2084
chr10	69758211	.	GT	G	2836.27	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.218;DP=793;FS=0.433;HRun=2;HaplotypeScore=77.8913;InbreedingCoeff=0.9998;MQ=89.17;MQ0=0;MQRankSum=-2.380;QD=31.17;ReadPosRankSum=2.926;VQSLOD=3.3899;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,169,2438	0/0:16,0:16:48.15:0,48,699	0/0:30,0:30:90.21:0,90,1175	0/0:28,0:28:71.83:0,72,1053	0/0:31,0:31:93.28:0,93,1329	0/0:27,0:27:81.27:0,81,1212	0/0:22,0:22:66.20:0,66,948	0/0:23,0:23:69.22:0,69,1000	0/0:36,0:36:99:0,102,1503	0/0:33,0:33:96.31:0,96,1390	0/0:28,0:28:84.27:0,84,1227	0/0:24,0:24:69.16:0,69,968	0/0:34,0:34:99:0,102,1496	0/0:28,0:28:84.19:0,84,1188	0/0:30,0:30:90.28:0,90,1308	0/0:36,0:36:99:0,108,1538	1/1:0,32:32:78.25:1012,78,0	1/1:0,15:15:42.14:545,42,0	0/0:18,0:18:51.17:0,51,764	0/0:30,0:30:90.27:0,90,1289	0/0:45,0:45:99:0,132,1914	0/0:24,0:24:69.23:0,69,1032	1/1:1,14:15:42.14:545,42,0	1/1:2,27:29:69.22:895,69,0	0/0:21,0:21:63.18:0,63,902	0/0:31,0:31:90.30:0,90,1340	0/0:40,0:40:99:0,120,1776	0/0:10,0:10:30.10:0,30,449
chr10	69761139	.	TC	T	989.80	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.462;DP=494;FS=17.794;HRun=1;HaplotypeScore=68.9341;InbreedingCoeff=0.9326;MQ=69.97;MQ0=0;MQRankSum=-0.668;QD=30.93;ReadPosRankSum=-4.887;VQSLOD=1.1025;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.13:0,51,653	0/0:10,0:10:30.09:0,30,392	0/0:20,0:18:39.12:0,39,587	0/0:11,0:11:21.42:0,21,187	0/0:20,0:20:57.15:0,57,726	0/0:14,0:14:42.04:0,42,532	0/0:11,0:11:33.09:0,33,419	1/1:1,31:32:96:1085,96,0	0/0:17,0:17:51.17:0,51,692	0/0:21,0:21:63.19:0,63,826	0/0:27,0:27:81.25:0,81,1085	0/0:17,0:17:51.17:0,51,693	0/0:20,0:20:60.19:0,60,796	0/0:15,0:15:45.07:0,45,530	0/0:15,0:15:45.12:0,45,580	0/0:10,0:10:30.08:0,30,382	0/0:25,0:25:75.16:0,75,949	0/0:20,0:19:60.18:0,60,789	0/0:17,0:17:50.14:0,50,339	0/0:21,0:21:52.44:0,52,384	0/0:8,0:8:23.52:0,24,141	0/0:17,0:17:51.13:0,51,646	0/0:31,0:31:93.22:0,93,1158	0/0:13,0:13:39.13:0,39,531	0/0:22,0:22:66.18:0,66,850	0/0:22,0:22:58.98:0,59,431	0/0:18,0:18:49.85:0,50,295	0/0:3,0:3:8.48:0,8,46
chr10	69761140	.	C	CT	2328.70	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=1.048;DP=495;FS=7.025;HRun=9;HaplotypeScore=64.1262;InbreedingCoeff=0.9091;MQ=69.85;MQ0=0;MQRankSum=-1.375;QD=22.83;ReadPosRankSum=0.415;VQSLOD=4.5023;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:44.94:0,45,384	0/0:10,0:10:26.99:0,27,234	0/0:19,0:17:46.30:0,46,379	0/1:11,0:11:4.38:4,0,81	0/0:20,0:20:47.96:0,48,412	0/0:13,0:13:38.99:0,39,338	0/0:11,0:11:26.98:0,27,230	0/0:32,0:32:14.28:0,14,51	0/0:18,0:18:50.98:0,51,443	0/0:21,0:21:62.97:0,63,543	0/0:27,0:27:80.98:0,81,703	0/0:17,0:17:50.99:0,51,443	0/0:20,0:20:56.87:0,57,481	0/0:17,0:17:38.98:0,39,337	0/0:15,0:15:38.99:0,39,338	0/0:10,0:10:26.99:0,27,234	0/0:24,0:24:62.98:0,63,547	0/0:19,0:19:56.96:0,57,488	1/1:0,17:17:48.09:511,48,0	1/1:3,19:22:34.11:604,34,0	1/1:0,8:8:24.06:266,24,0	0/0:17,0:17:44.97:0,45,387	0/0:31,0:31:74.97:0,75,650	0/0:13,0:13:38.99:0,39,339	0/0:22,0:22:56.98:0,57,493	1/1:6,16:22:42.11:465,42,0	1/1:0,18:18:51.14:564,51,0	1/1:0,4:4:9.02:100,9,0
chr10	69761259	.	CT	C	11515.27	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=15.732;DP=585;FS=3.158;HRun=2;HaplotypeScore=81.3278;InbreedingCoeff=0.9853;MQ=75.13;MQ0=0;MQRankSum=-1.079;QD=35.21;ReadPosRankSum=0.746;VQSLOD=5.2406;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,39:40:99:1402,108,0	0/0:9,0:9:27.08:0,27,385	0/0:16,0:16:38.73:0,39,451	0/0:4,0:4:6.02:0,6,90	1/1:0,18:18:48.15:623,48,0	0/0:14,0:14:42.14:0,42,620	0/0:20,0:20:60.19:0,60,877	1/1:1,28:29:81.24:1033,81,0	0/0:19,0:19:57.19:0,57,854	0/0:18,0:18:54.18:0,54,810	0/0:21,0:21:63.20:0,63,919	0/0:20,0:20:57.18:0,57,836	0/0:28,0:28:81.27:0,81,1214	0/0:23,0:23:66.21:0,66,966	0/0:24,0:24:66.21:0,66,969	0/0:12,0:12:36.12:0,36,540	1/1:0,32:32:87.28:1129,87,0	1/1:0,22:22:63.20:814,63,0	1/1:1,25:26:75.22:953,75,0	1/1:0,22:22:60.19:770,60,0	1/1:0,35:35:93.30:1208,93,0	0/0:10,0:10:30.09:0,30,430	1/1:0,19:19:42.13:544,42,0	1/1:0,29:29:84.27:1091,84,0	0/0:20,0:20:57.18:0,57,836	1/1:2,23:25:69.22:896,69,0	1/1:0,21:21:54.18:701,54,0	1/1:0,9:9:27.09:350,27,0
chr10	69761771	.	GCTCTAC	G	14033.52	PASS	AB=0.513;AC=25;AF=0.446;AN=56;BaseQRankSum=17.451;DP=655;FS=0.000;HRun=0;HaplotypeScore=162.7890;InbreedingCoeff=0.9120;MQ=76.87;MQ0=0;MQRankSum=-16.922;QD=51.98;ReadPosRankSum=-2.735;VQSLOD=4.3532;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:90.13:1982,90,0	0/0:7,0:7:21.04:0,21,699	0/0:25,0:25:75.24:0,75,2483	0/0:27,0:27:70.37:0,70,2360	1/1:0,24:24:47.95:932,48,0	0/0:26,0:26:75.24:0,75,2634	0/0:26,0:26:75.26:0,75,2696	1/1:0,24:24:66.17:1424,66,0	0/0:21,0:21:63.22:0,63,2329	0/0:25,0:25:75.24:0,75,2635	0/0:17,0:17:51.18:0,51,1778	0/0:39,0:39:99:0,117,4224	0/0:21,0:21:63.19:0,63,2181	0/0:27,0:27:81.28:0,81,3007	0/0:32,0:32:96.33:0,96,3474	0/0:28,0:28:84.29:0,84,3058	1/1:0,20:20:47.80:1089,48,0	1/1:0,9:9:20.99:477,21,0	1/1:0,22:22:66.18:1370,66,0	1/1:0,18:18:51.09:1104,51,0	1/1:0,18:18:36.03:644,36,0	0/0:34,0:34:99:0,99,3549	1/1:0,17:17:33.04:665,33,0	1/1:0,29:29:50.70:1007,51,0	0/0:29,0:29:87.30:0,87,3181	0/1:1,19:20:55.85:1106,0,56	1/1:0,30:30:84.29:2081,84,0	1/1:0,2:2:6.02:154,6,0
chr10	69763210	.	G	GGCT	3821.25	PASS	AC=24;AF=0.444;AN=54;BaseQRankSum=8.630;DP=188;FS=13.594;HRun=0;HaplotypeScore=98.5921;InbreedingCoeff=0.8656;MQ=70.45;MQ0=0;MQRankSum=-9.659;QD=37.83;ReadPosRankSum=-1.258;VQSLOD=3.6118;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,1:9:17.73:284,18,0	0/0:1,0:1:3.01:0,3,56	0/0:7,0:6:18.06:0,18,327	0/0:8,0:7:18.03:0,18,277	1/1:4,1:6:9.03:219,9,0	0/0:8,0:8:21.07:0,21,391	0/0:7,0:7:21.07:0,21,389	1/1:16,0:16:42.11:878,42,0	0/0:8,0:8:21.07:0,21,387	0/0:9,0:9:24.08:0,24,445	0/0:3,0:3:9.03:0,9,161	0/0:3,0:3:9.03:0,9,160	0/0:4,0:4:12.04:0,12,223	0/0:7,0:7:21.07:0,21,390	0/0:7,0:7:21.07:0,21,389	0/0:7,0:7:21.07:0,21,384	1/1:8,0:8:8.47:344,8,0	1/1:4,2:7:9.03:217,9,0	1/1:9,0:9:9.02:204,9,0	1/1:9,0:9:24.07:451,24,0	1/1:4,0:4:9.01:143,9,0	0/0:7,0:7:21.07:0,21,387	1/1:6,0:6:14.94:181,15,0	1/1:6,0:6:8.62:125,9,0	0/0:1,0:1:3.01:0,3,56	1/1:7,0:7:21.03:395,21,0	1/1:14,0:14:20.38:379,20,0	./.
chr10	69763804	.	CTAT	C	15471.96	PASS	AB=0.512;AC=25;AF=0.446;AN=56;BaseQRankSum=16.749;DP=730;FS=2.370;HRun=0;HaplotypeScore=113.6440;InbreedingCoeff=0.9290;MQ=86.91;MQ0=0;MQRankSum=-3.425;QD=45.51;ReadPosRankSum=2.975;VQSLOD=6.4948;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:81.28:1510,81,0	0/0:6,0:6:18.06:0,18,444	0/0:27,0:27:81.28:0,81,1909	0/0:26,0:26:69.18:0,69,1632	1/1:0,33:33:75.26:1394,75,0	0/0:29,0:29:87.30:0,87,2138	0/0:28,0:28:81.28:0,81,1986	1/1:0,28:28:84.27:1522,84,0	0/0:25,0:25:75.26:0,75,1844	0/0:36,0:36:99:0,105,2606	0/0:32,0:32:93.32:0,93,2292	0/0:20,0:20:60.21:0,60,1420	0/0:30,0:30:87.30:0,87,2132	0/0:27,0:27:81.28:0,81,1992	0/0:26,0:26:78.27:0,78,1883	0/0:20,0:20:60.21:0,60,1478	1/1:0,25:25:69.24:1286,69,0	1/1:0,16:16:45.15:839,45,0	1/1:0,23:23:69.24:1282,69,0	1/1:1,27:28:72.25:1342,72,0	1/1:0,35:35:78.27:1454,78,0	0/0:28,0:28:81.27:0,81,1929	1/1:0,30:30:63.22:1174,63,0	1/1:0,30:30:60.21:1118,60,0	0/0:30,0:30:90.31:0,90,2214	0/1:1,21:22:7.77:1097,0,8	1/1:0,29:29:69.14:1286,69,0	1/1:0,3:3:9.03:168,9,0
chr10	69764095	.	G	GA	13412.31	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=19.260;DP=713;FS=1.217;HRun=3;HaplotypeScore=112.6319;InbreedingCoeff=0.9999;MQ=81.03;MQ0=0;MQRankSum=-2.211;QD=38.43;ReadPosRankSum=0.589;VQSLOD=4.0580;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:72.24:1008,72,0	0/0:12,0:12:33.10:0,33,396	0/0:20,0:20:57.08:0,57,620	0/0:17,0:17:44.84:0,45,488	1/1:2,31:33:93.27:1280,93,0	0/0:21,0:20:51.15:0,51,612	0/0:21,0:21:60.18:0,60,720	1/1:2,29:31:84.28:1176,84,0	0/0:26,0:26:75.23:0,75,897	0/0:39,0:39:99:0,111,1332	0/0:20,0:20:57.17:0,57,684	0/0:22,0:22:66.19:0,66,780	0/0:31,0:31:93.27:0,93,1103	0/0:29,0:29:87.27:0,87,1044	0/0:22,0:22:60.17:0,60,709	0/0:21,0:21:60.17:0,60,709	1/1:3,25:28:61.45:990,61,0	1/1:1,23:24:66.22:924,66,0	1/1:1,28:29:84.28:1176,84,0	1/1:2,18:20:48.16:671,48,0	1/1:1,22:23:66.22:924,66,0	0/0:33,0:33:90.28:0,90,1078	1/1:0,23:23:69.23:966,69,0	1/1:1,29:30:81.27:1134,81,0	0/0:30,0:30:87.25:0,87,1030	1/1:2,28:30:51.41:1104,51,0	1/1:2,39:40:99:1596,114,0	1/1:0,11:11:33.11:462,33,0
chr10	69764718	.	AGAG	A	2787.46	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.627;DP=538;FS=2.376;HRun=0;HaplotypeScore=76.7049;InbreedingCoeff=0.9558;MQ=83.35;MQ0=0;MQRankSum=-2.129;QD=40.99;ReadPosRankSum=4.002;VQSLOD=4.8705;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,2675	0/0:3,0:3:9.03:0,9,204	0/0:14,0:14:36.12:0,36,740	0/0:17,0:17:41.50:0,42,802	0/0:18,0:18:48.16:0,48,1084	0/0:25,0:25:66.23:0,66,1491	0/0:19,0:19:51.16:0,51,1089	0/0:28,0:28:81.26:0,81,1715	0/0:19,0:19:57.20:0,57,1292	0/0:23,0:23:57.20:0,57,1291	0/0:11,0:11:30.06:0,30,589	0/0:30,0:30:90.31:0,90,2015	0/0:17,0:17:51.13:0,51,1107	0/0:24,0:24:72.25:0,72,1631	0/0:33,0:33:96.29:0,96,2045	0/0:15,0:15:45.15:0,45,1020	1/1:0,21:21:57.19:949,57,0	1/1:0,16:16:39.13:650,39,0	0/0:19,0:19:57.19:0,57,1250	0/0:14,0:14:36.12:0,36,815	0/0:25,0:25:72.25:0,72,1607	0/0:16,0:16:42.13:0,42,890	1/1:1,14:15:36.12:599,36,0	1/1:0,16:16:45.15:749,45,0	0/0:16,0:16:45.14:0,45,955	0/0:20,0:20:54.19:0,54,1218	0/0:19,0:19:54.17:0,54,1161	0/0:2,0:2:6.02:0,6,136
chr10	69764951	.	ATG	A	223.57	PASS	AB=0.928;AC=16;AF=0.444;AN=36;BaseQRankSum=3.116;DP=551;FS=17.228;HRun=0;HaplotypeScore=79.6027;InbreedingCoeff=0.0295;MQ=62.68;MQ0=10;MQRankSum=0.314;QD=0.94;ReadPosRankSum=-0.981;VQSLOD=0.2426;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:26.85:0,27,282	./.	./.	./.	0/1:12,1:13:21.77:44,0,22	0/0:16,0:15:9.03:0,9,128	0/1:31,0:30:38.62:39,0,72	./.	0/0:10,0:10:3.01:0,3,38	1/1:13,3:15:6.01:63,6,0	./.	0/0:24,0:23:7.53:0,8,50	0/0:28,0:27:11.92:0,12,125	0/1:16,2:17:19.33:19,0,93	0/0:20,0:20:2.90:0,3,16	0/1:14,2:16:19.20:25,0,19	0/1:32,0:39:8.13:8,0,16	1/1:25,0:26:2.84:14,3,0	./.	1/1:12,2:14:3.01:31,3,0	1/1:29,1:30:2.68:31,3,0	0/1:20,0:20:11.64:12,0,64	./.	./.	0/0:19,0:20:0.91:0,1,139	./.	1/1:13,1:14:6.01:63,6,0	./.
chr10	69766317	.	T	TG	1721.84	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.693;DP=588;FS=4.284;HRun=5;HaplotypeScore=96.7956;InbreedingCoeff=0.9903;MQ=78.62;MQ0=2;MQRankSum=-2.587;QD=25.32;ReadPosRankSum=1.239;VQSLOD=2.9848;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:65.56:0,66,705	0/0:13,0:13:33.08:0,33,354	0/0:31,0:28:75.92:0,76,752	0/0:26,0:18:25.87:0,26,417	0/0:11,0:11:13.24:0,13,150	0/0:18,0:18:42.09:0,42,442	0/0:24,0:24:57.14:0,57,611	0/0:32,0:32:78.18:0,78,825	0/0:18,0:18:51.10:0,51,538	0/0:30,0:30:78.19:0,78,838	0/0:15,0:15:36.08:0,36,379	0/0:29,0:28:63.11:0,63,663	0/0:21,0:21:45.11:0,45,483	0/0:27,0:27:63.15:0,63,675	0/0:15,0:15:36.08:0,36,381	0/0:26,0:26:72.17:0,72,764	1/1:3,12:15:39.09:476,39,0	1/1:2,18:20:48.62:608,49,0	0/0:14,0:14:36.06:0,36,375	0/0:14,0:14:39.10:0,39,417	0/0:30,0:30:60.14:0,60,640	0/0:17,0:17:45.11:0,45,483	1/1:2,8:10:21.07:265,21,0	1/1:0,23:23:45.03:533,45,0	0/0:21,0:21:60.15:0,60,645	0/0:24,0:24:57.14:0,57,613	0/0:9,0:9:21.05:0,21,226	0/0:14,0:14:27.07:0,27,290
chr10	69766363	.	GCGTGCGTGCA	G	2719.07	PASS	AB=0.772;AC=20;AF=0.417;AN=48;BaseQRankSum=4.450;DP=445;FS=10.512;HRun=0;HaplotypeScore=118.8732;InbreedingCoeff=0.5549;MQ=46.64;MQ0=40;MQRankSum=-4.654;QD=16.18;ReadPosRankSum=-5.121;VQSLOD=-0.2777;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:18:8.91:95,9,0	1/1:5,0:5:3.01:50,3,0	0/1:27,0:3:23.98:24,0,54	0/1:31,0:10:2.12:288,0,2	1/1:7,0:7:5.99:49,6,0	0/0:16,0:16:22.86:0,23,1013	0/0:25,0:25:51.09:0,51,2151	0/1:5,15:16:33.87:556,0,34	0/0:18,0:16:36.17:0,36,1329	0/0:31,0:29:66.83:0,67,1978	0/0:12,0:11:27.09:0,27,1134	0/0:38,0:33:68.83:0,69,2266	0/0:17,0:16:17.99:0,18,522	0/0:25,0:24:44.28:0,44,1612	0/0:15,0:14:32.86:0,33,874	0/0:20,0:20:53.65:0,54,1943	./.	1/1:3,0:2:3.01:42,3,0	1/1:9,7:7:21.07:501,21,0	1/1:1,6:7:1.55:4,2,0	./.	0/0:17,0:15:15.95:0,16,1105	./.	./.	0/0:16,0:14:30.09:0,30,1162	0/1:1,14:15:41.70:804,0,42	1/1:10,0:9:15.94:266,16,0	1/1:8,0:7:12.04:210,12,0
chr10	69766371	.	GCA	G	979.09	PASS	AB=0.842;AC=15;AF=0.341;AN=44;BaseQRankSum=8.544;DP=402;FS=8.259;HRun=0;HaplotypeScore=73.4292;InbreedingCoeff=0.3830;MQ=43.72;MQ0=48;MQRankSum=-5.427;QD=5.69;ReadPosRankSum=-3.256;VQSLOD=0.8875;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:0,13:12:0.08:0,0,0	./.	1/1:26,0:1:2.04:6,2,0	0/1:30,4:8:20.30:117,0,20	0/1:0,5:5:0:0,0,0	0/0:14,0:14:26.99:0,27,478	0/0:24,0:23:42.52:0,43,1000	0/1:20,0:16:34.16:167,0,34	0/0:18,0:15:5.43:0,5,560	0/0:25,0:23:36.49:0,36,1014	0/0:11,0:10:24.08:0,24,471	0/0:34,0:29:59.75:0,60,986	0/1:15,0:14:1.09:1,0,215	0/0:24,0:23:48.15:0,48,834	0/1:14,0:13:4.88:5,0,483	0/0:19,0:19:47.96:0,48,868	./.	./.	1/1:16,0:7:21.07:283,21,0	0/0:6,1:7:0:0,0,0	./.	0/0:16,0:14:29.89:0,30,577	./.	./.	0/0:13,0:11:30.10:0,30,547	0/1:15,0:15:7.69:345,0,8	1/1:1,7:7:9.03:111,9,0	1/1:1,5:5:6.02:78,6,0
chr10	69766398	.	C	CGT	676.31	PASS	AB=0.872;AC=5;AF=0.156;AN=32;BaseQRankSum=-1.194;DP=306;FS=25.102;HRun=0;HaplotypeScore=52.4242;InbreedingCoeff=0.4339;MQ=41.92;MQ0=39;MQRankSum=1.861;QD=9.39;ReadPosRankSum=2.950;VQSLOD=1.6170;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:30,0:2:5.98:0,6,55	0/0:43,0:7:10.27:0,10,108	./.	0/0:15,0:15:13.37:0,13,147	0/0:26,0:26:36.09:0,36,410	./.	0/0:18,0:16:26.41:0,26,283	0/0:16,0:17:6.48:0,6,64	0/0:8,0:8:3:0,3,25	0/1:16,14:26:1.01:218,0,1	0/0:12,0:13:18.04:0,18,194	1/1:18,6:22:30.06:427,30,0	0/0:13,0:12:20.96:0,21,245	0/0:15,0:15:18.03:0,18,198	./.	./.	./.	0/1:1,0:1:0:0,0,0	0/0:10,0:4:0:0,0,0	0/1:14,1:14:44.78:132,0,45	./.	./.	0/0:11,0:10:9.50:0,9,106	./.	./.	./.
chr10	69766506	.	TGCGTGCATGCGTGC	T	670.91	PASS	AB=1.000;AC=9;AF=0.281;AN=32;BaseQRankSum=3.465;DP=332;FS=14.463;HRun=0;HaplotypeScore=156.5475;InbreedingCoeff=0.7620;MQ=46.00;MQ0=29;MQRankSum=-4.516;QD=12.90;ReadPosRankSum=-5.184;VQSLOD=-0.1652;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	0/0:20,0:17:33.07:0,33,1220	0/0:27,0:26:57.60:0,58,2175	1/1:6,4:5:14.26:211,14,0	0/0:21,0:19:41.84:0,42,1637	0/0:27,0:25:71.61:0,72,3040	0/0:9,3:12:24.08:0,24,1248	0/1:25,0:23:3.18:3,0,1746	0/0:8,0:7:18.06:0,18,901	0/0:30,0:29:54.16:0,54,2367	0/0:11,0:11:30.10:0,30,1502	0/0:15,0:14:6.68:0,7,1332	./.	./.	./.	./.	./.	0/0:16,0:16:36.12:0,36,1867	./.	./.	0/0:15,0:14:27.07:0,27,1170	1/1:0,11:11:18.49:309,18,0	1/1:4,0:4:5.94:196,6,0	1/1:2,0:1:3.01:78,3,0
chr10	69766511	.	GCA	G	109.73	PASS	AC=8;AF=0.250;AN=32;BaseQRankSum=4.849;DP=324;FS=26.859;HRun=0;HaplotypeScore=102.0762;InbreedingCoeff=0.7682;MQ=47.13;MQ0=22;MQRankSum=-5.075;QD=4.22;ReadPosRankSum=-3.111;VQSLOD=0.2215;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	0/0:19,0:18:25.61:0,26,522	0/0:26,0:25:57.20:0,57,1142	1/1:9,0:4:5.99:63,6,0	0/0:19,0:18:38.94:0,39,708	0/0:31,0:29:68.84:0,69,1444	0/0:12,0:12:24.08:0,24,473	0/0:22,0:21:23.10:0,23,659	0/0:9,0:8:21.07:0,21,401	0/0:29,0:28:54.15:0,54,1037	0/0:11,0:11:28.65:0,29,537	0/0:14,1:14:1.19:0,1,508	./.	./.	./.	./.	./.	0/0:16,0:16:36.09:0,36,686	./.	./.	0/0:18,1:18:36.12:0,36,726	1/1:11,0:11:7.66:69,8,0	1/1:1,3:4:5.93:75,6,0	1/1:1,1:1:2.96:19,3,0
chr10	69767114	.	AG	A	12552.43	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=18.568;DP=695;FS=0.282;HRun=1;HaplotypeScore=101.5099;InbreedingCoeff=0.9978;MQ=82.51;MQ0=0;MQRankSum=-2.883;QD=39.35;ReadPosRankSum=-0.324;VQSLOD=4.6819;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:96.32:1342,96,0	1/1:0,16:16:42.14:586,42,0	0/0:21,0:21:57.15:0,57,833	0/0:18,0:18:51.17:0,51,766	1/1:0,31:31:87.29:1217,87,0	0/0:18,0:18:54.18:0,54,862	0/0:34,0:34:99:0,102,1624	1/1:0,29:29:84.25:1155,84,0	0/0:25,0:25:75.24:0,75,1171	0/0:35,0:35:99:0,102,1604	0/0:26,0:26:75.24:0,75,1176	0/0:32,0:32:96.33:0,96,1526	0/0:21,0:21:63.21:0,63,1007	0/0:32,0:32:96.33:0,96,1534	0/0:38,0:37:99:0,114,1820	0/0:24,0:24:72.25:0,72,1148	1/1:0,25:25:72.24:1007,72,0	1/1:0,24:24:66.22:923,66,0	1/1:0,15:15:45.14:612,45,0	1/1:0,18:18:45.15:629,45,0	1/1:0,38:38:99:1510,108,0	0/0:23,0:23:69.22:0,69,1079	1/1:0,20:20:57.19:795,57,0	1/1:0,15:15:42.14:587,42,0	0/0:29,0:29:87.30:0,87,1385	1/1:0,17:17:51.14:678,51,0	1/1:0,32:32:93.31:1301,93,0	1/1:0,5:5:15.05:210,15,0
chr10	69767788	.	TG	T	9091.64	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=18.054;DP=654;FS=4.409;HRun=6;HaplotypeScore=101.4847;InbreedingCoeff=0.9976;MQ=79.47;MQ0=0;MQRankSum=-4.215;QD=27.38;ReadPosRankSum=0.001;VQSLOD=4.6918;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:37:99:1064,99,0	1/1:0,12:12:30.08:322,30,0	0/0:23,0:23:56.85:0,57,655	0/0:14,0:13:30:0,30,361	1/1:2,17:19:47.93:473,48,0	0/0:26,0:26:66.18:0,66,824	0/0:20,0:20:54.15:0,54,693	1/1:2,38:40:99:1138,111,0	0/0:25,0:25:66.21:0,66,867	0/0:31,0:31:90.27:0,90,1155	0/0:21,0:21:63.19:0,63,814	0/0:16,0:16:42.14:0,42,553	0/0:26,0:26:78.23:0,78,995	0/0:22,0:22:63.20:0,63,828	0/0:29,0:29:87.26:0,87,1117	0/0:22,0:22:60.17:0,60,761	1/1:1,19:20:54.13:580,54,0	1/1:3,13:16:33.08:355,33,0	1/1:4,22:26:66.15:700,66,0	1/1:2,28:30:78.16:827,78,0	1/1:1,16:17:42.11:451,42,0	0/0:16,0:16:48.16:0,48,631	1/1:4,20:24:54.13:578,54,0	1/1:2,24:26:66.17:709,66,0	0/0:31,0:31:78.22:0,78,984	1/1:0,24:24:72.17:767,72,0	1/1:0,34:34:90.23:967,90,0	1/1:0,7:7:15.04:161,15,0
chr10	69768464	.	AC	A	2019.59	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.163;DP=778;FS=3.920;HRun=2;HaplotypeScore=77.3110;InbreedingCoeff=1.0000;MQ=90.73;MQ0=0;MQRankSum=-4.526;QD=35.43;ReadPosRankSum=1.402;VQSLOD=4.2626;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:81.26:1051,81,0	0/0:14,0:14:42.10:0,42,586	0/0:38,0:38:99:0,111,1595	0/0:26,0:26:59.02:0,59,882	1/1:0,29:29:84.27:1090,84,0	0/0:17,0:17:51.17:0,51,763	0/0:19,0:19:54.14:0,54,749	0/0:37,0:37:99:0,105,1518	0/0:20,0:20:57.19:0,57,854	0/0:36,0:36:99:0,102,1515	0/0:20,0:20:60.20:0,60,899	0/0:28,0:28:84.28:0,84,1235	0/0:37,0:37:99:0,108,1595	0/0:26,0:26:78.26:0,78,1156	0/0:34,0:34:99:0,102,1489	0/0:39,0:39:99:0,111,1662	0/0:16,0:16:48.16:0,48,719	0/0:20,0:20:60.15:0,60,854	0/0:18,0:18:51.15:0,51,718	0/0:41,0:41:99:0,120,1765	0/0:27,0:27:78.26:0,78,1162	0/0:23,0:23:69.23:0,69,1034	0/0:29,0:29:87.29:0,87,1303	0/0:31,0:31:93.27:0,93,1364	0/0:21,0:21:63.21:0,63,940	0/0:34,0:34:99:0,102,1487	0/0:42,0:42:99:0,126,1882	0/0:28,0:27:84.28:0,84,1259
chr10	69768950	.	G	GTTGTT	5019.09	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-7.466;DP=580;FS=6.200;HRun=0;HaplotypeScore=107.6953;InbreedingCoeff=0.9718;MQ=69.86;MQ0=4;MQRankSum=-0.179;QD=50.19;ReadPosRankSum=-0.577;VQSLOD=4.3899;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:75.24:0,75,1380	1/1:3,6:9:21.07:524,21,0	0/0:20,0:15:13.53:0,14,206	0/0:26,0:18:6.65:0,7,126	0/0:31,0:31:57.19:0,57,1050	0/0:17,0:17:36.12:0,36,659	0/0:19,0:19:42.14:0,42,755	0/0:22,0:22:29.90:0,30,411	0/0:14,0:14:33.10:0,33,585	0/0:24,0:24:48.15:0,48,841	0/0:25,0:25:57.18:0,57,1034	0/0:18,0:18:37.01:0,37,693	0/0:17,0:17:48.16:0,48,875	0/0:13,0:13:36.12:0,36,659	0/0:18,0:18:45.14:0,45,790	0/0:15,0:15:30.10:0,30,547	1/1:13,15:28:48.16:1338,48,0	1/1:9,13:22:39.13:1120,39,0	0/0:21,0:21:30.05:0,30,476	0/0:26,0:26:57.19:0,57,1037	0/0:13,0:13:39.13:0,39,717	0/0:9,0:9:27.09:0,27,505	1/1:6,13:21:41.60:1089,42,0	1/1:6,13:20:33.11:948,33,0	0/0:28,0:28:63.22:0,63,1159	0/0:20,0:21:32.55:0,33,679	0/0:30,0:30:60.21:0,60,1122	0/0:19,0:19:54.19:0,54,1009
chr10	69771163	.	TACACAC	T	1665.50	PASS	AB=0.700;AC=19;AF=0.352;AN=54;BaseQRankSum=9.661;DP=614;FS=5.933;HRun=0;HaplotypeScore=136.1767;InbreedingCoeff=0.4912;MQ=52.52;MQ0=22;MQRankSum=-7.601;QD=7.06;ReadPosRankSum=1.288;VQSLOD=2.3483;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:35:19.72:0,20,317	1/1:1,4:5:6.49:81,6,0	0/0:35,0:4:6.02:0,6,83	./.	0/0:14,0:24:14.07:0,14,178	0/0:28,0:32:49.72:0,50,1283	0/0:21,0:20:33.11:0,33,857	0/1:13,0:19:34.06:53,0,34	0/0:26,0:26:54.18:0,54,1486	0/0:16,0:16:36.12:0,36,958	0/0:7,0:9:12.04:0,12,221	0/0:20,0:23:44.36:0,44,1332	0/0:17,0:17:39.06:0,39,923	0/0:17,0:16:27.09:0,27,790	0/1:16,0:39:2.11:2,0,92	0/0:23,0:25:47.96:0,48,1326	0/1:14,4:18:11.72:148,0,12	1/1:9,13:22:23.99:385,24,0	1/1:12,0:21:3.57:272,4,0	1/1:12,0:19:5.19:20,5,0	0/0:28,0:28:10.06:0,10,156	0/0:14,0:14:24.08:0,24,653	1/1:9,9:18:8.94:93,9,0	0/1:10,15:25:16.97:31,0,17	0/0:9,0:11:24.08:0,24,663	0/1:13,0:24:17.81:269,0,18	1/1:3,0:19:35.49:448,35,0	1/1:3,0:6:3.01:42,3,0
chr10	69772064	.	AAAGGACAGT	A	12061.86	PASS	AB=0.509;AC=13;AF=0.232;AN=56;BaseQRankSum=16.249;DP=718;FS=4.824;HRun=0;HaplotypeScore=208.9092;InbreedingCoeff=0.8989;MQ=80.92;MQ0=0;MQRankSum=-15.451;QD=79.88;ReadPosRankSum=0.814;VQSLOD=4.7848;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,163,7941	0/0:10,0:10:30.10:0,30,1422	0/0:27,0:27:77.85:0,78,2653	0/0:26,0:26:74.24:0,74,2906	0/0:30,0:30:87.29:0,87,4062	0/0:25,0:25:75.25:0,75,3010	0/0:26,0:26:78.27:0,78,3740	1/1:0,17:17:51.15:1434,51,0	0/0:18,0:18:54.19:0,54,2503	0/0:37,0:37:99:0,111,5332	0/0:17,0:17:51.18:0,51,2414	0/0:30,0:30:90.30:0,90,4325	0/0:21,0:21:63.20:0,63,2825	0/0:34,0:34:99:0,99,4870	0/0:29,0:29:87.30:0,87,4157	0/0:30,0:29:87.30:0,87,4115	0/0:30,0:30:90.22:0,90,3835	0/0:23,0:23:69.24:0,69,3424	1/1:0,22:22:63.22:2004,63,0	1/1:1,27:28:75.26:2395,75,0	1/1:0,23:23:36.12:1072,36,0	0/0:20,0:20:60.21:0,60,2927	0/0:25,0:25:75.26:0,75,3737	0/0:30,0:30:90.27:0,90,4105	0/0:24,0:24:72.25:0,72,3367	0/1:1,28:29:64.70:2521,0,65	1/1:0,25:25:60.21:1951,60,0	1/1:0,7:7:21.07:684,21,0
chr10	69772266	.	C	CA	397.78	PASS	AB=0.853;AC=10;AF=0.179;AN=56;BaseQRankSum=-1.815;DP=551;FS=2.330;HRun=14;HaplotypeScore=104.1538;InbreedingCoeff=0.1786;MQ=66.47;MQ0=2;MQRankSum=-0.067;QD=2.60;ReadPosRankSum=-2.286;VQSLOD=0.2322;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,22:39:0.29:236,0,0	0/1:2,6:8:4.27:91,0,4	0/0:26,0:18:4.54:0,5,25	0/0:19,0:14:0.05:0,0,21	1/1:6,10:16:1.69:132,2,0	0/0:15,0:16:22.48:0,22,140	0/0:23,0:27:16.18:0,16,200	0/0:15,0:21:14.85:0,15,42	0/0:15,0:15:16.43:0,16,103	0/1:23,5:27:12.14:12,0,189	0/0:20,0:20:23.33:0,23,152	0/1:25,0:25:8.92:9,0,145	0/0:11,0:10:8.71:0,9,58	0/0:17,0:17:13.59:0,14,94	0/0:20,0:19:26.21:0,26,172	0/0:21,0:20:34.36:0,34,220	0/0:29,0:29:21.76:0,22,246	0/1:13,0:14:18.49:18,0,95	0/0:10,0:11:16.32:0,16,93	0/0:18,0:19:25.27:0,25,155	0/0:22,0:23:27.33:0,27,165	0/0:19,0:19:11.69:0,12,188	0/0:14,0:14:17.61:0,18,115	0/0:24,0:24:41.03:0,41,267	0/1:9,6:16:25.85:26,0,43	0/0:14,0:15:16.62:0,17,102	0/0:24,0:25:11.77:0,12,159	0/1:7,0:6:0:0,0,0
chr10	69772404	.	TTA	T	5367.68	PASS	AB=0.526;AC=13;AF=0.232;AN=56;BaseQRankSum=12.534;DP=590;FS=5.105;HRun=0;HaplotypeScore=76.0547;InbreedingCoeff=0.8965;MQ=82.69;MQ0=0;MQRankSum=-2.373;QD=37.80;ReadPosRankSum=-0.250;VQSLOD=6.4529;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1990	0/0:10,0:10:30.10:0,30,533	0/0:21,0:21:59.45:0,59,836	0/0:16,0:16:14.88:0,15,555	0/0:19,0:19:57.17:0,57,992	0/0:21,0:20:63.20:0,63,1101	0/0:16,0:16:48.12:0,48,771	1/1:1,34:35:99:1461,102,0	0/0:23,0:23:69.19:0,69,1118	0/0:24,0:24:69.13:0,69,1146	0/0:17,0:17:51.16:0,51,885	0/0:17,0:17:51.17:0,51,916	0/0:11,0:11:30.10:0,30,530	0/0:26,0:26:78.22:0,78,1309	0/0:32,0:31:96.26:0,96,1576	0/0:27,0:27:81.20:0,81,1322	0/0:21,0:21:63.20:0,63,1095	0/0:15,0:15:42.09:0,42,664	1/1:1,12:13:36.09:488,36,0	1/1:1,22:23:63.11:856,63,0	1/1:0,14:14:36.12:530,36,0	0/0:18,0:18:54.19:0,54,970	0/0:27,0:27:81.24:0,81,1368	0/0:23,0:23:66.18:0,66,1122	0/0:23,0:22:69.24:0,69,1234	0/1:2,18:20:47.69:710,0,48	1/1:1,24:25:60.07:882,60,0	1/1:0,12:12:30.10:441,30,0
chr10	69773387	.	G	GCC	596.75	PASS	AB=0.968;AC=12;AF=0.231;AN=52;BaseQRankSum=7.643;DP=575;FS=71.279;HRun=0;HaplotypeScore=226.9664;InbreedingCoeff=0.0451;MQ=29.84;MQ0=4;MQRankSum=-1.039;QD=2.93;ReadPosRankSum=1.665;VQSLOD=0.2410;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:0.61:0,1,2	0/0:6,0:6:0:0,0,0	./.	./.	0/0:36,0:36:3.04:0,3,44	1/1:19,1:18:0.94:5,1,0	0/0:12,1:13:2.89:0,3,11	0/1:29,6:35:99:231,0,193	0/1:23,0:23:31.19:31,0,66	0/1:24,0:24:99:131,0,475	0/1:20,1:20:0.50:0,0,79	0/0:34,0:31:3.33:0,3,22	0/0:31,0:30:8.08:0,8,128	1/1:26,0:25:3.01:45,3,0	0/0:25,0:23:2.48:0,2,20	0/0:25,0:25:8.20:0,8,50	0/0:11,0:10:8.21:0,8,67	0/1:13,0:13:3.10:3,0,142	0/0:15,0:14:12.30:0,12,261	0/0:19,0:19:6.01:0,6,71	0/0:18,0:16:2.83:0,3,14	0/0:27,0:27:14.88:0,15,184	1/1:13,0:13:0.36:2,0,0	0/0:18,0:18:3.01:0,3,45	0/0:28,0:28:5.92:0,6,92	0/1:29,0:29:99:263,0,418	0/0:20,1:19:26.92:0,27,249	0/0:14,0:14:29.28:0,29,354
chr10	69773916	.	A	AT	1467.21	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.980;DP=531;FS=33.843;HRun=0;HaplotypeScore=59.7516;InbreedingCoeff=0.9731;MQ=80.46;MQ0=1;MQRankSum=-3.700;QD=41.92;ReadPosRankSum=-4.450;VQSLOD=0.4615;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:87.29:0,87,1217	0/0:15,0:15:41.41:0,41,585	0/0:23,0:23:63.35:0,63,822	0/0:8,0:8:24.08:0,24,334	0/0:31,0:31:93.30:0,93,1280	0/0:25,0:25:75.25:0,75,1048	0/0:16,0:16:48.14:0,48,653	1/1:2,33:35:99:1562,99,0	0/0:21,0:21:60.20:0,60,839	0/0:21,0:21:63.21:0,63,881	0/0:19,0:19:57.19:0,57,797	0/0:17,0:17:48.16:0,48,670	0/0:20,0:20:60.19:0,60,824	0/0:17,0:17:48.16:0,48,671	0/0:13,0:13:39.13:0,39,546	0/0:14,0:14:39.13:0,39,545	0/0:18,0:18:51.17:0,51,713	0/0:8,0:8:20.42:0,20,292	0/0:16,0:16:48.16:0,48,672	0/0:41,0:41:99:0,120,1639	0/0:12,0:12:36.11:0,36,487	0/0:10,0:10:30.10:0,30,420	0/0:19,0:19:54.16:0,54,735	0/0:9,0:9:20.77:0,21,232	0/0:27,0:27:81.27:0,81,1133	0/0:18,0:18:54.18:0,54,755	0/0:20,0:20:60.20:0,60,838	0/0:5,0:5:15.05:0,15,210
chr10	69773977	.	CTT	C	1271.94	PASS	AC=8;AF=0.160;AN=50;BaseQRankSum=6.860;DP=413;FS=4.601;HRun=12;HaplotypeScore=56.0829;InbreedingCoeff=0.6800;MQ=75.05;MQ0=6;MQRankSum=-1.362;QD=16.52;ReadPosRankSum=2.170;VQSLOD=2.3865;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:28:62.61:673,63,0	0/0:9,0:9:0:0,0,0	0/0:26,0:20:27.60:0,28,303	0/0:8,0:6:5.30:0,5,150	1/1:4,25:29:69.10:701,69,0	0/0:30,0:30:81.23:0,81,1181	0/0:10,0:11:27.08:0,27,387	0/0:6,0:6:0:0,0,0	0/0:18,0:18:45.15:0,45,670	0/0:21,0:23:66.20:0,66,917	0/0:25,0:24:59.23:0,59,855	0/0:13,0:12:24.04:0,24,331	0/0:13,0:13:36.11:0,36,517	0/0:9,0:10:29.59:0,30,409	0/0:17,0:17:48.16:0,48,716	0/0:19,0:19:54.04:0,54,748	1/1:5,0:5:2.67:11,3,0	./.	0/0:6,0:6:0:0,0,0	0/0:19,0:19:0:0,0,0	./.	0/0:7,0:8:23.57:0,24,321	1/1:12,0:12:2.73:12,3,0	0/0:4,0:4:0:0,0,0	0/0:28,0:31:86.26:0,86,1208	0/0:13,0:13:0:0,0,0	0/0:13,0:12:0.47:0,0,2	./.
chr10	69775114	.	A	AGATG	6504.79	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-12.263;DP=695;FS=1.882;HRun=0;HaplotypeScore=109.9626;InbreedingCoeff=0.9784;MQ=73.07;MQ0=0;MQRankSum=-1.003;QD=38.72;ReadPosRankSum=-1.852;VQSLOD=4.3621;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:58.88:0,59,984	0/0:9,0:9:27.09:0,27,444	0/0:32,0:30:6.15:0,6,233	0/0:20,0:18:28.80:0,29,400	0/0:33,0:33:87.30:0,87,1415	0/0:34,0:34:69.22:0,69,1110	0/0:28,0:28:60.19:0,60,957	1/1:20,15:36:54.18:1221,54,0	0/0:26,0:26:60.19:0,60,957	0/0:31,0:31:69.24:0,69,1129	0/0:27,0:27:66.22:0,66,1076	0/0:18,0:18:45.15:0,45,736	0/0:18,0:18:33.11:0,33,542	0/0:25,0:25:57.19:0,57,937	0/0:26,0:26:57.19:0,57,937	0/0:25,0:25:66.23:0,66,1080	0/0:27,0:27:66.23:0,66,1082	0/0:15,0:15:22.26:0,22,366	1/1:9,10:21:38.75:711,39,0	1/1:7,22:29:60.21:1465,60,0	1/1:12,14:27:36.12:866,36,0	0/0:25,0:25:63.22:0,63,1035	0/0:24,0:24:54.18:0,54,884	0/0:33,0:33:69.24:0,69,1124	0/0:19,0:18:48.16:0,48,787	1/1:6,19:25:54.19:1288,54,0	1/1:7,7:16:18.06:440,18,0	1/1:4,10:14:21.07:513,21,0
chr10	69777518	.	AT	A	1833.62	PASS	AB=0.958;AC=9;AF=0.161;AN=56;BaseQRankSum=5.433;DP=645;FS=2.742;HRun=8;HaplotypeScore=89.6444;InbreedingCoeff=0.8818;MQ=77.89;MQ0=1;MQRankSum=-1.275;QD=17.14;ReadPosRankSum=2.088;VQSLOD=3.7739;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:67.17:0,67,401	0/0:10,0:10:27.08:0,27,326	0/0:36,1:29:41.27:0,41,672	0/1:22,0:20:7.54:8,0,310	0/0:28,0:28:72.96:0,73,426	0/0:25,0:25:66.20:0,66,797	0/0:23,0:23:57.17:0,57,678	0/0:6,0:31:78.11:0,78,437	0/0:25,0:25:72.22:0,72,870	0/0:17,0:17:48.14:0,48,566	0/0:26,0:26:69.16:0,69,806	0/0:22,0:22:66.18:0,66,775	0/0:28,0:28:75.23:0,75,905	0/0:22,0:22:63.18:0,63,750	0/0:27,0:27:75.20:0,75,883	0/0:17,0:17:48.14:0,48,569	1/1:2,17:19:45.02:425,45,0	1/1:1,16:17:39.06:377,39,0	0/0:21,0:21:60.18:0,60,715	0/0:28,0:28:78.23:0,78,932	0/0:12,0:12:33.10:0,33,398	0/0:26,0:26:78.24:0,78,942	1/1:2,30:32:84.11:811,84,0	1/1:2,14:16:39.06:377,39,0	0/0:24,0:24:72.20:0,72,849	0/0:24,0:24:66.19:0,66,779	0/0:31,0:31:90.27:0,90,1077	0/0:7,0:7:15.05:0,15,181
chr10	69778622	.	ATTAG	A	2591.73	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.587;DP=635;FS=5.280;HRun=0;HaplotypeScore=106.2247;InbreedingCoeff=0.9973;MQ=83.99;MQ0=0;MQRankSum=-2.695;QD=47.99;ReadPosRankSum=3.754;VQSLOD=4.1297;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.23:0,66,1804	0/0:11,0:11:33.11:0,33,870	0/0:22,0:22:65.88:0,66,1597	0/0:17,0:18:34.17:0,34,1031	0/0:25,0:25:75.26:0,75,2009	0/0:24,0:24:69.24:0,69,1801	0/0:22,0:22:63.22:0,63,1715	0/0:38,0:38:99:0,111,2922	0/0:10,0:10:30.10:0,30,791	0/0:34,0:34:99:0,99,2673	0/0:22,0:22:63.19:0,63,1564	0/0:29,0:29:87.30:0,87,2365	0/0:17,0:17:45.15:0,45,1216	0/0:21,0:21:60.21:0,60,1608	0/0:20,0:20:60.21:0,60,1596	0/0:24,0:24:69.24:0,69,1845	1/1:1,18:19:45.11:833,45,0	1/1:0,10:10:30.10:581,30,0	0/0:33,0:33:96.31:0,96,2452	0/0:46,0:46:99:0,132,3547	0/0:22,0:22:63.22:0,63,1720	0/0:25,0:25:75.25:0,75,1958	1/1:0,19:19:51:988,51,0	1/1:0,6:6:18.06:349,18,0	0/0:24,0:24:72.25:0,72,1970	0/0:30,0:30:90.29:0,90,2352	0/0:25,0:24:72.23:0,72,1895	0/0:17,0:17:51.18:0,51,1363
chr10	69780012	.	CAG	C	313.93	PASS	AB=0.947;AC=17;AF=0.405;AN=42;BaseQRankSum=3.436;DP=670;FS=13.002;HRun=0;HaplotypeScore=80.9913;InbreedingCoeff=0.2243;MQ=68.27;MQ0=20;MQRankSum=0.347;QD=1.32;ReadPosRankSum=0.221;VQSLOD=0.6165;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:23.15:0,23,185	./.	./.	./.	0/0:24,0:24:11.03:0,11,95	0/1:8,0:9:22.76:23,0,76	1/1:25,1:26:2.51:31,3,0	0/0:16,0:16:1.77:0,2,3	0/1:20,1:21:16.20:16,0,153	0/0:25,0:25:22.17:0,22,233	0/0:10,0:10:3:0,3,25	0/0:18,0:19:3.94:0,4,198	0/0:15,0:15:15.04:0,15,199	0/0:23,0:23:9.01:0,9,101	0/1:31,2:36:81.98:82,0,88	0/1:24,0:24:5.02:5,0,301	0/0:15,0:19:15.50:0,15,181	0/1:25,0:25:11.46:11,0,113	1/1:9,0:11:0.89:2,1,0	./.	./.	0/0:27,0:27:3.01:0,3,41	./.	1/1:17,7:24:20.88:205,21,0	1/1:18,0:18:3:32,3,0	1/1:16,0:19:2.84:14,3,0	1/1:19,0:24:5.68:28,6,0	./.
chr10	69782535	.	A	AGTAG	5257.73	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-1.623;DP=751;FS=0.471;HRun=0;HaplotypeScore=136.3125;InbreedingCoeff=0.8976;MQ=70.70;MQ0=8;MQRankSum=-2.370;QD=16.80;ReadPosRankSum=-2.452;VQSLOD=4.0312;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:51:66.08:0,66,615	1/1:2,4:7:9.03:212,9,0	0/0:33,0:28:3.01:0,3,36	0/0:31,0:22:2.82:0,3,22	0/0:9,0:22:30:0,30,271	0/0:23,0:23:45.13:0,45,655	0/0:24,0:25:27.08:0,27,401	1/1:38,0:37:15.04:257,15,0	0/0:30,0:30:36.12:0,36,559	0/0:28,0:27:45.13:0,45,645	0/0:32,0:32:48.13:0,48,684	0/0:17,0:17:21.04:0,21,280	0/0:19,0:19:27.09:0,27,420	0/0:23,0:23:39.12:0,39,584	0/0:37,0:37:57.18:0,57,862	0/0:26,0:26:42.12:0,42,611	1/1:35,0:37:15.50:230,15,0	1/1:15,0:15:9.01:121,9,0	1/1:17,3:21:14.40:245,14,0	1/1:17,17:38:7.43:1068,7,0	1/1:23,21:45:45.15:1061,45,0	0/0:27,0:27:33.10:0,33,492	1/1:10,0:14:12.04:208,12,0	1/1:19,0:24:17.09:272,17,0	0/0:12,0:12:9.02:0,9,119	1/1:24,0:37:42.14:746,42,0	1/1:15,8:23:27.09:629,27,0	1/1:7,0:12:12.04:209,12,0
chr10	69783078	.	AAAAAAAAT	A	830.10	PASS	AB=1.000;AC=14;AF=0.292;AN=48;BaseQRankSum=0.657;DP=94;FS=25.460;HRun=0;HaplotypeScore=29.9628;InbreedingCoeff=0.4154;MQ=85.62;MQ0=2;MQRankSum=-2.164;QD=29.65;ReadPosRankSum=1.904;VQSLOD=0.9987;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:16.87:0,17,239	1/1:1,0:1:3.01:50,3,0	0/0:7,0:5:15.03:0,15,213	0/0:13,0:8:17.64:0,18,500	0/0:6,0:6:18.02:0,18,295	0/0:1,0:1:3.01:0,3,129	0/0:1,0:1:3.01:0,3,128	1/1:3,0:3:5.42:96,5,0	0/0:5,0:4:12.03:0,12,362	0/0:1,0:1:2.99:0,3,24	0/0:5,0:5:15.04:0,15,400	0/0:3,0:3:9:0,9,183	./.	0/0:1,0:1:3:0,3,25	0/0:2,0:2:6.02:0,6,185	0/0:1,0:1:3.01:0,3,52	./.	1/1:0,11:11:18.06:500,18,0	0/1:3,0:3:19:61,0,19	0/1:4,0:4:15.05:15,0,24	0/0:1,0:1:2.37:0,2,8	0/0:2,0:2:6.02:0,6,266	1/1:2,0:2:6.01:75,6,0	1/1:2,0:2:6.02:154,6,0	0/0:2,0:2:6.02:0,6,265	1/1:2,0:2:2.36:25,2,0	./.	./.
chr10	69783080	.	AAAAAAT	A	853.25	PASS	AC=16;AF=0.364;AN=44;BaseQRankSum=0.761;DP=84;FS=17.849;HRun=0;HaplotypeScore=26.1976;InbreedingCoeff=0.6123;MQ=83.97;MQ0=2;MQRankSum=-2.266;QD=34.13;ReadPosRankSum=0.248;VQSLOD=1.4612;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:15.14:0,15,104	1/1:1,0:1:3:25,3,0	0/0:6,0:4:11.60:0,12,100	0/0:13,0:8:17.83:0,18,436	0/0:6,0:6:15:0,15,168	0/0:1,0:1:3.01:0,3,103	0/0:1,0:1:3.01:0,3,102	1/1:0,3:3:9.02:164,9,0	0/0:4,0:3:9.03:0,9,265	./.	0/0:4,0:4:12.02:0,12,266	0/0:1,0:1:3.01:0,3,106	./.	./.	0/0:2,0:2:6.01:0,6,131	0/0:1,0:1:3:0,3,25	./.	1/1:11,0:11:18.06:385,18,0	1/1:0,2:2:6.02:119,6,0	1/1:3,0:3:9:100,9,0	0/0:0,1:1:1.55:0,2,4	0/0:2,0:2:6.02:0,6,213	1/1:1,0:1:3:25,3,0	1/1:2,0:2:6.02:106,6,0	0/0:2,0:2:6.02:0,6,212	1/1:2,0:2:6.01:81,6,0	./.	./.
chr10	69783084	.	AAT	A	328.66	PASS	AC=10;AF=0.294;AN=34;BaseQRankSum=2.022;DP=67;FS=12.689;HRun=0;HaplotypeScore=23.4427;InbreedingCoeff=0.5286;MQ=78.41;MQ0=2;MQRankSum=-2.663;QD=15.65;ReadPosRankSum=2.150;VQSLOD=1.7772;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:12.04:165,12,0	./.	0/0:4,0:2:5.91:0,6,65	0/0:13,0:8:17.41:0,17,229	0/0:0,5:5:0:0,0,0	0/0:1,0:1:3.01:0,3,49	0/0:1,0:1:3.01:0,3,50	1/1:3,0:3:6:59,6,0	0/0:4,0:3:9.03:0,9,116	./.	0/0:2,0:2:6.02:0,6,103	0/0:1,0:1:3.01:0,3,51	./.	./.	0/0:1,0:1:3.01:0,3,52	./.	./.	1/1:11,0:11:18.01:161,18,0	1/1:2,0:2:3.89:31,4,0	./.	0/0:1,0:1:0.47:0,0,1	0/0:2,0:2:6.02:0,6,103	./.	1/1:1,0:1:3.01:32,3,0	0/0:2,0:2:6.02:0,6,103	./.	./.	./.
chr10	69783581	.	CTCTCTGTG	C	4405.06	PASS	AB=0.890;AC=16;AF=0.286;AN=56;BaseQRankSum=8.456;DP=635;FS=2.234;HRun=0;HaplotypeScore=190.7949;InbreedingCoeff=0.7252;MQ=58.69;MQ0=10;MQRankSum=-6.671;QD=23.18;ReadPosRankSum=-1.057;VQSLOD=4.5327;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,5:26:21.77:286,0,22	0/0:9,0:9:14.26:0,14,399	0/0:27,0:15:9.02:0,9,158	0/0:44,0:22:19.11:0,19,488	1/1:12,8:20:3.01:48,3,0	0/0:30,0:30:60.21:0,60,2036	0/0:19,0:19:48.15:0,48,1414	0/1:27,2:29:27.64:763,0,28	0/0:26,0:26:60.21:0,60,2043	0/0:22,0:21:48.16:0,48,1573	0/0:19,0:19:48.16:0,48,1685	0/0:26,0:26:54.19:0,54,1745	0/0:20,0:20:39.13:0,39,1231	0/0:26,0:26:54.19:0,54,1775	0/0:42,0:42:99:0,111,3696	0/0:27,0:27:63.22:0,63,2057	0/0:24,0:24:38.91:0,39,1098	0/0:20,0:18:36.10:0,36,1067	1/1:15,3:18:30.02:536,30,0	1/1:8,4:11:3.01:49,3,0	1/1:19,2:20:5.74:72,6,0	0/0:11,0:11:21.07:0,21,664	0/0:12,0:12:18.05:0,18,514	0/0:24,0:24:27.09:0,27,989	0/0:17,0:17:27.08:0,27,868	1/1:12,7:19:39.13:902,39,0	1/1:16,11:25:48.06:962,48,0	1/1:12,5:16:33.11:788,33,0
chr10	69783601	.	CTGTGTCTCTCTCTGTCTCTG	C	7902.80	PASS	AB=0.967;AC=17;AF=0.304;AN=56;BaseQRankSum=9.837;DP=638;FS=0.409;HRun=0;HaplotypeScore=300.6748;InbreedingCoeff=0.5064;MQ=50.11;MQ0=13;MQRankSum=-7.467;QD=36.42;ReadPosRankSum=-1.136;VQSLOD=3.1715;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:24:99:316,0,445	0/1:9,0:9:29.02:29,0,452	0/0:17,0:8:21.06:0,21,435	0/0:35,0:8:4.93:0,5,472	0/1:23,0:23:37.23:37,0,212	0/0:27,0:26:81.28:0,81,4262	0/0:23,0:23:66.21:0,66,3137	0/1:21,0:21:15.79:952,0,16	0/0:26,0:26:74.47:0,74,4402	0/0:23,0:21:63.21:0,63,3677	0/0:27,0:27:78.27:0,78,4523	0/0:25,0:25:69.02:0,69,4218	0/0:23,0:23:63.22:0,63,3400	0/0:30,0:30:87.30:0,87,4924	0/0:41,0:41:99:0,117,6579	0/0:27,0:27:81.28:0,81,5199	0/1:31,0:31:37.27:37,0,1360	0/0:21,0:19:21.12:0,21,1344	1/1:16,1:16:36.04:1154,36,0	1/1:9,0:8:3.01:49,3,0	1/1:15,1:16:9.01:120,9,0	0/0:16,0:16:42.14:0,42,2319	0/0:16,0:16:6.98:0,7,650	0/0:26,0:26:27.56:0,28,1353	0/0:17,0:17:42.13:0,42,2443	1/1:20,1:22:63.22:2223,63,0	1/1:23,0:24:54.08:1355,54,0	1/1:10,7:16:42.14:1629,42,0
chr10	69783605	.	GTC	G	501.07	PASS	AB=0.969;AC=9;AF=0.167;AN=54;BaseQRankSum=11.509;DP=622;FS=0.000;HRun=0;HaplotypeScore=140.0529;InbreedingCoeff=0.3627;MQ=48.95;MQ0=13;MQRankSum=-8.717;QD=4.01;ReadPosRankSum=2.997;VQSLOD=2.8590;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:24:47.98:48,0,236	0/1:9,0:9:41.01:41,0,159	0/0:19,0:7:15.05:0,15,227	0/0:35,0:9:12.01:0,12,135	0/0:22,0:22:14.80:0,15,194	0/0:29,0:27:75.23:0,75,1225	0/0:23,0:23:63.20:0,63,1037	0/1:17,0:17:1.65:2,0,273	0/0:27,0:27:77.89:0,78,1207	0/0:22,0:20:57.20:0,57,984	0/0:25,0:25:75.24:0,75,1257	0/0:26,0:26:69.12:0,69,1150	0/0:22,0:22:60.17:0,60,971	0/0:30,0:30:84.20:0,84,1290	0/0:38,0:38:99:0,99,1632	0/0:27,0:27:78.25:0,78,1300	0/0:31,0:31:33.87:0,34,558	0/0:18,0:16:27.09:0,27,461	0/1:14,0:13:60.49:60,0,170	./.	0/0:13,0:12:2.68:0,3,51	0/0:17,0:17:42.13:0,42,661	0/0:19,0:19:15.03:0,15,223	0/0:27,0:27:27.09:0,27,462	0/0:17,0:17:45.11:0,45,684	0/1:18,4:22:5.55:226,0,6	1/1:19,2:20:16.96:115,17,0	1/1:17,0:16:26.52:154,27,0
chr10	69783619	.	CTG	C	804.33	PASS	AB=0.952;AC=9;AF=0.161;AN=56;BaseQRankSum=9.369;DP=676;FS=23.700;HRun=0;HaplotypeScore=154.3539;InbreedingCoeff=0.0707;MQ=49.28;MQ0=12;MQRankSum=-5.601;QD=5.29;ReadPosRankSum=-2.076;VQSLOD=1.5323;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:23.67:0,24,423	0/0:10,0:10:9.93:0,10,113	0/0:30,0:13:35.69:0,36,596	0/0:36,0:8:14.34:0,14,319	0/0:25,0:25:30.10:0,30,535	0/0:24,0:22:69.21:0,69,1245	0/0:26,0:26:78.21:0,78,1341	0/1:17,0:16:61.37:61,0,327	0/0:29,0:29:81.24:0,81,1467	0/0:26,0:24:72.24:0,72,1341	0/0:31,0:31:93.22:0,93,1653	0/0:29,0:29:78.08:0,78,1364	0/0:25,0:25:75.22:0,75,1353	0/0:27,0:27:81.26:0,81,1510	0/0:35,0:35:99:0,99,1748	0/0:27,0:27:81.28:0,81,1554	0/0:31,0:31:24.58:0,25,472	0/0:18,0:17:9.06:0,9,390	0/1:17,2:19:99:228,0,201	1/1:19,1:19:23.90:227,24,0	0/1:16,0:15:19.29:19,0,39	0/0:24,0:24:66.12:0,66,1109	0/1:19,0:19:5.95:6,0,153	0/0:27,0:27:27.09:0,27,483	0/0:19,0:19:54.17:0,54,1004	0/1:17,4:21:99:214,0,279	0/1:21,2:22:84.55:85,0,257	0/1:17,0:17:61.47:109,0,61
chr10	69783625	.	CTGTCTCTGTCTCTGTGTG	C	472.19	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=8.458;DP=707;FS=9.655;HRun=0;HaplotypeScore=339.5946;InbreedingCoeff=0.1643;MQ=50.74;MQ0=13;MQRankSum=-7.475;QD=4.77;ReadPosRankSum=6.192;VQSLOD=0.4274;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:36.12:0,36,1421	1/1:2,7:9:5.93:273,6,0	0/0:38,0:18:47.80:0,48,1201	0/0:34,0:13:30.65:0,31,881	0/0:27,0:27:42.14:0,42,1591	0/0:23,0:21:57.15:0,57,2830	0/0:26,0:26:71.97:0,72,2892	0/0:21,0:19:42.13:0,42,925	0/0:29,0:29:75.02:0,75,3849	0/0:27,0:26:70.12:0,70,3175	0/0:31,0:31:84.27:0,84,4273	0/0:26,0:26:69.02:0,69,3984	0/0:25,0:25:72.25:0,72,3736	0/0:28,0:28:78.25:0,78,4565	0/0:35,0:35:90.31:0,90,4428	0/0:30,0:30:84.29:0,84,4998	0/1:34,0:34:11.34:11,0,168	0/0:19,0:18:9.98:0,10,154	0/1:18,0:18:48.17:48,0,379	0/0:22,0:21:33.11:0,33,715	0/0:16,0:15:9.18:0,9,202	0/0:24,0:24:66.23:0,66,3150	0/0:22,0:22:5.59:0,6,30	0/0:27,0:27:11.98:0,12,142	0/0:23,0:23:63.19:0,63,3199	0/1:21,0:21:43.02:43,0,233	0/0:25,0:24:28.99:0,29,617	0/1:17,0:17:99:217,0,132
chr10	69783627	.	GTCTCTGTCTC	G	3602	PASS	AB=0.957;AC=14;AF=0.250;AN=56;BaseQRankSum=13.800;DP=707;FS=14.280;HRun=0;HaplotypeScore=238.1907;InbreedingCoeff=0.5900;MQ=50.97;MQ0=14;MQRankSum=-9.522;QD=19.90;ReadPosRankSum=0.712;VQSLOD=1.5350;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:26.02:0,26,666	0/1:8,0:8:40.94:95,0,41	0/0:42,0:20:29.99:0,30,1258	0/0:34,0:13:27.37:0,27,756	0/0:25,0:26:20.35:0,20,684	0/0:22,0:20:63.19:0,63,2575	0/0:26,0:26:78.27:0,78,2801	0/1:19,0:17:19.09:91,0,19	0/0:29,0:29:75.24:0,75,3155	0/0:27,0:26:77.07:0,77,2822	0/0:31,0:31:93.30:0,93,3543	0/0:26,0:26:71.91:0,72,2982	0/0:26,0:26:78.24:0,78,3160	0/0:28,0:28:84.27:0,84,3562	0/0:35,0:35:99:0,99,3838	0/0:30,0:30:90.31:0,90,3751	0/1:34,0:34:99:99,0,346	0/0:17,0:17:26.95:0,27,453	0/1:15,4:19:12.60:727,0,13	1/1:20,2:21:27.80:361,28,0	1/1:17,0:16:5.08:35,5,0	0/0:25,0:25:72.25:0,72,2673	0/0:22,0:22:9.83:0,10,149	0/0:28,0:28:20.93:0,21,375	0/0:23,0:23:66.21:0,66,2525	1/1:17,4:21:41.54:829,42,0	1/1:21,3:23:32.59:485,33,0	1/1:14,3:17:35.82:881,36,0
chr10	69783631	.	CTGTCTCTGTGTG	C	1568.17	PASS	AB=0.841;AC=13;AF=0.232;AN=56;BaseQRankSum=10.157;DP=721;FS=7.410;HRun=0;HaplotypeScore=269.9555;InbreedingCoeff=0.4623;MQ=53.57;MQ0=16;MQRankSum=-10.076;QD=8.34;ReadPosRankSum=5.194;VQSLOD=1.0540;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:39.13:0,39,1257	1/1:8,0:8:6.02:148,6,0	0/0:46,0:22:53.68:0,54,991	0/0:41,0:17:36.84:0,37,622	0/0:27,0:26:42.62:0,43,1329	0/0:24,0:22:51.17:0,51,2065	0/0:25,0:25:60.17:0,60,2077	0/0:20,0:18:31.38:0,31,453	0/0:26,0:26:69.24:0,69,2828	0/0:27,0:26:57.17:0,57,2042	0/0:31,0:31:75.26:0,75,3164	0/0:25,0:26:66:0,66,2946	0/0:25,0:25:69.24:0,69,2936	0/0:29,0:29:75.26:0,75,3474	0/0:34,0:34:84.26:0,84,2867	0/0:31,0:31:75.26:0,75,3569	0/1:10,24:34:14.56:412,0,15	1/1:6,10:16:6.02:97,6,0	0/1:19,0:19:99:214,0,132	0/0:23,0:22:19.48:0,19,219	0/0:19,0:17:11.80:0,12,170	0/0:24,0:24:69.24:0,69,2525	1/1:3,20:23:2.09:50,2,0	0/1:10,15:26:0:0,0,0	0/0:25,0:25:69.24:0,69,2557	0/1:22,0:22:99:370,0,140	0/1:24,0:23:24.93:25,0,241	1/1:16,0:16:33.65:409,34,0
chr10	69783649	.	C	CTG	5246.97	PASS	AB=0.848;AC=18;AF=0.321;AN=56;BaseQRankSum=4.545;DP=775;FS=2.964;HRun=0;HaplotypeScore=151.8789;InbreedingCoeff=0.8197;MQ=56.98;MQ0=12;MQRankSum=-1.759;QD=19.95;ReadPosRankSum=-0.388;VQSLOD=5.1952;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,27:35:36.12:574,36,0	0/0:7,0:7:5.95:0,6,55	0/0:62,0:34:61.14:0,61,704	0/0:50,0:29:16.13:0,16,390	1/1:9,23:31:39.13:636,39,0	0/0:17,0:17:15.33:0,15,396	0/0:21,0:21:51.12:0,51,589	1/1:7,23:29:72.21:1067,72,0	0/0:26,0:27:59.99:0,60,689	0/0:23,0:24:53.75:0,54,598	0/0:30,0:31:80.73:0,81,922	0/0:28,0:28:71.31:0,71,821	0/0:28,0:28:69.22:0,69,848	0/0:31,0:31:87.26:0,87,1056	0/0:31,0:31:65.53:0,66,744	0/0:33,0:33:90.24:0,90,1069	0/0:28,0:28:11.45:0,11,60	0/0:14,0:14:18:0,18,194	1/1:16,8:24:47.80:637,48,0	1/1:5,22:28:42.14:684,42,0	1/1:6,12:17:15.05:241,15,0	0/0:27,0:28:66.04:0,66,788	0/1:23,0:23:2.24:2,0,32	0/0:22,0:22:5.68:0,6,69	0/0:27,0:28:71.50:0,71,842	0/1:13,9:23:26.89:521,0,27	1/1:11,19:31:36.12:580,36,0	1/1:9,8:17:21.99:304,22,0
chr10	69784820	.	T	TGC	465.11	PASS	AB=0.833;AC=17;AF=0.315;AN=54;BaseQRankSum=-1.000;DP=223;FS=2.791;HRun=0;HaplotypeScore=38.5664;InbreedingCoeff=0.6270;MQ=79.40;MQ0=1;MQRankSum=-0.741;QD=6.55;ReadPosRankSum=-3.479;VQSLOD=1.6394;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:14.99:131,15,0	0/0:2,0:2:6.02:0,6,74	./.	0/1:8,0:9:11.99:12,0,59	1/1:7,0:7:6.01:72,6,0	0/0:6,0:6:15.05:0,15,185	0/0:10,0:10:12.04:0,12,148	1/1:17,0:17:12.04:154,12,0	0/0:5,0:5:9.01:0,9,97	0/0:5,0:5:9.03:0,9,111	0/0:6,0:6:15.03:0,15,173	0/0:8,0:8:9.03:0,9,111	0/0:7,0:7:12.02:0,12,134	0/0:12,0:12:18.04:0,18,200	0/0:4,0:4:6.02:0,6,74	0/0:4,0:4:6.01:0,6,62	0/0:22,0:22:48.12:0,48,579	0/0:12,0:12:21.06:0,21,260	1/1:5,2:7:6.02:94,6,0	0/0:2,0:2:2.74:0,3,12	1/1:3,0:3:3.01:46,3,0	0/0:3,0:3:6.02:0,6,74	0/0:10,0:10:15.05:0,15,185	0/0:14,0:14:24.05:0,24,282	0/0:12,0:12:17.83:0,18,223	1/1:4,0:4:2.94:18,3,0	1/1:3,2:5:6.02:72,6,0	1/1:2,0:2:3.01:34,3,0
chr10	69784836	.	C	CA	142.15	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=1.499;DP=131;FS=5.265;HRun=1;HaplotypeScore=24.5307;InbreedingCoeff=0.6626;MQ=80.08;MQ0=1;MQRankSum=-2.380;QD=7.90;ReadPosRankSum=-3.797;VQSLOD=-0.6156;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:6.02:81,6,0	0/0:2,0:2:6.02:0,6,79	0/0:9,0:5:9.02:0,9,100	0/0:7,0:6:13.46:0,13,128	1/1:1,0:1:2.98:22,3,0	0/0:8,0:8:24.05:0,24,291	0/0:5,0:5:11.94:0,12,133	1/1:5,0:5:11.89:84,12,0	0/0:2,0:2:5.99:0,6,63	0/0:4,0:4:12.03:0,12,151	0/0:4,0:4:12.04:0,12,164	0/0:4,0:4:12.02:0,12,130	0/0:4,0:4:12.04:0,12,167	0/0:5,0:5:14.97:0,15,166	0/0:4,0:4:12.04:0,12,165	0/0:1,0:1:3.01:0,3,42	0/0:17,0:17:51.12:0,51,669	0/0:9,0:9:27.09:0,27,371	1/1:1,0:1:3:26,3,0	./.	1/1:1,0:1:2.98:21,3,0	0/0:3,0:3:6.02:0,6,83	0/0:5,0:5:15.05:0,15,204	0/0:10,0:10:27.08:0,27,358	0/0:9,0:9:20.90:0,21,276	1/1:0,1:1:2.04:6,2,0	1/1:3,0:3:5.53:36,6,0	1/1:1,0:1:2.99:23,3,0
chr10	69785262	.	ATCTCTCTCTG	A	1861.74	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.911;DP=538;FS=17.724;HRun=0;HaplotypeScore=172.4159;InbreedingCoeff=0.9249;MQ=78.65;MQ0=0;MQRankSum=-5.705;QD=40.47;ReadPosRankSum=0.494;VQSLOD=2.4132;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:19.96:0,20,1336	0/0:2,0:6:5.20:0,5,161	0/0:28,0:23:56.92:0,57,1056	0/0:30,0:26:63.13:0,63,1684	0/0:16,0:16:32.62:0,33,1358	0/0:21,0:21:60.19:0,60,2249	0/0:20,0:20:51.16:0,51,1962	0/0:41,0:41:99:0,117,3384	0/0:20,0:20:57.18:0,57,1926	0/0:25,0:25:72.24:0,72,3163	0/0:20,0:20:54.17:0,54,2157	0/0:9,0:9:27.09:0,27,1156	0/0:17,0:17:51.16:0,51,2280	0/0:19,0:19:57.18:0,57,2535	0/0:19,0:19:54.17:0,54,1934	0/0:22,0:22:63.20:0,63,2316	1/1:6,2:8:12.04:256,12,0	1/1:6,7:15:36.12:1067,36,0	0/0:17,0:17:42.12:0,42,1427	0/0:18,0:18:42.07:0,42,1930	0/0:21,0:20:33.08:0,33,1322	0/0:9,0:9:27.08:0,27,1037	1/1:4,7:11:21.05:543,21,0	1/1:10,2:12:6.02:147,6,0	0/0:14,0:14:39.13:0,39,1475	0/0:27,0:27:75.19:0,75,3009	0/0:30,0:30:63.21:0,63,2411	0/0:20,0:20:51.13:0,51,1898
chr10	69785266	.	C	CTG	513.80	PASS	AB=0.830;AC=8;AF=0.143;AN=56;BaseQRankSum=4.530;DP=548;FS=29.881;HRun=0;HaplotypeScore=106.4964;InbreedingCoeff=0.6572;MQ=74.81;MQ0=0;MQRankSum=-4.893;QD=9.34;ReadPosRankSum=-2.067;VQSLOD=1.4704;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:41.35:0,41,524	0/1:5,2:7:16.34:44,0,16	0/0:25,0:20:56.92:0,57,721	0/0:29,0:25:62.80:0,63,870	0/0:19,0:19:16:0,16,482	0/0:21,0:21:63.18:0,63,918	0/0:20,0:20:51.16:0,51,758	0/0:46,0:46:99:0,126,1772	0/0:19,0:19:57.18:0,57,846	0/0:24,0:24:72.23:0,72,1068	0/0:19,0:19:54.07:0,54,798	0/0:12,0:12:30.07:0,30,431	0/0:18,0:18:54.11:0,54,758	0/0:20,0:20:57.18:0,57,851	0/0:18,0:18:54.17:0,54,801	0/0:24,0:24:69.17:0,69,986	1/1:8,2:10:5.99:162,6,0	0/1:13,2:15:3.70:208,0,4	0/0:17,0:16:45.07:0,45,618	0/0:19,0:19:44.90:0,45,653	0/0:19,0:18:33.06:0,33,505	0/0:9,0:9:27.08:0,27,392	1/1:11,0:11:6.45:130,6,0	1/1:9,3:12:6.02:103,6,0	0/0:13,0:13:39.13:0,39,583	0/0:29,0:29:84.09:0,84,1127	0/0:29,0:29:63.21:0,63,941	0/0:20,0:20:51.13:0,51,702
chr10	69785316	.	G	GTC	3777.97	PASS	AB=0.804;AC=15;AF=0.268;AN=56;BaseQRankSum=6.737;DP=618;FS=0.000;HRun=0;HaplotypeScore=146.9626;InbreedingCoeff=0.6858;MQ=55.86;MQ0=9;MQRankSum=-9.165;QD=15.68;ReadPosRankSum=-1.488;VQSLOD=3.3694;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,2:23:2.66:36,3,0	0/0:10,0:10:12.35:0,12,61	0/0:17,0:7:11.49:0,11,114	0/1:27,0:12:1.99:2,0,43	0/1:23,5:28:17.15:229,0,17	0/0:29,0:29:81.24:0,81,998	0/0:19,0:19:39.05:0,39,476	1/1:19,20:37:64.39:874,64,0	0/0:21,0:21:48.12:0,48,572	0/0:34,0:34:87.19:0,87,1066	0/0:18,0:18:45.01:0,45,534	0/0:16,0:16:45.14:0,45,562	0/0:23,0:23:57.18:0,57,710	0/0:18,0:18:51.16:0,51,637	0/0:22,0:22:60.19:0,60,749	0/0:26,0:26:78.24:0,78,965	0/0:13,0:14:25.92:0,26,105	0/0:21,0:20:8.79:0,9,81	1/1:12,5:15:26.04:376,26,0	0/1:4,13:17:11.38:264,0,11	0/0:13,9:20:0.42:0,0,1	0/0:16,0:15:42.13:0,42,525	0/0:11,0:11:16.10:0,16,67	0/0:19,0:19:11.68:0,12,49	0/0:21,0:21:54.06:0,54,661	1/1:12,21:31:37.52:941,38,0	1/1:13,21:36:36.38:494,36,0	1/1:4,16:19:39.10:561,39,0
chr10	69785330	.	T	TTTCTCTCTC	3475.51	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=11.066;DP=591;FS=1.674;HRun=0;HaplotypeScore=215.4892;InbreedingCoeff=0.6541;MQ=57.68;MQ0=6;MQRankSum=-9.373;QD=14.42;ReadPosRankSum=-5.996;VQSLOD=1.2542;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:17.01:211,17,0	0/0:10,0:10:27.03:0,27,378	0/0:26,0:15:16.84:0,17,313	0/0:30,0:14:10.34:0,10,263	1/1:26,4:30:68.67:683,69,0	0/0:30,0:30:90.28:0,90,2551	0/0:15,0:15:44.92:0,45,1079	0/1:28,0:28:59.05:410,0,59	0/0:17,0:17:51.17:0,51,1530	0/0:32,0:32:90.30:0,90,2444	0/0:20,0:20:53.96:0,54,1387	0/0:17,0:17:51.16:0,51,1409	0/0:20,0:20:60.20:0,60,1489	0/0:19,0:19:57.20:0,57,1726	0/0:24,0:24:66.21:0,66,1877	0/0:27,0:27:78.26:0,78,2355	0/1:15,0:15:6.81:7,0,418	0/0:19,0:18:5.53:0,6,540	1/1:13,0:12:14.47:246,14,0	1/1:18,0:17:24.03:236,24,0	1/1:18,0:17:15.47:119,15,0	0/0:15,0:15:45.15:0,45,1289	0/0:9,0:9:24:0,24,347	0/1:18,0:18:19.07:19,0,195	0/0:20,0:20:56.91:0,57,1784	0/1:31,0:29:33.25:616,0,33	1/1:29,0:31:27.69:462,28,0	1/1:20,0:20:46.85:466,47,0
chr10	69785340	.	T	TCTC	1839.29	PASS	AB=0.875;AC=12;AF=0.214;AN=56;BaseQRankSum=8.716;DP=569;FS=0.425;HRun=0;HaplotypeScore=152.5317;InbreedingCoeff=0.7646;MQ=59.29;MQ0=3;MQRankSum=-9.027;QD=12.95;ReadPosRankSum=-2.304;VQSLOD=3.1759;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:29.74:0,30,369	0/0:9,0:9:24.33:0,24,302	0/0:25,0:16:44.58:0,45,595	0/0:28,0:15:29.34:0,29,405	0/0:29,0:29:54.31:0,54,896	0/0:29,0:29:84.29:0,84,1563	0/0:17,0:17:51.11:0,51,886	1/1:26,0:26:24.12:328,24,0	0/0:17,0:17:51.17:0,51,950	0/0:34,0:34:99:0,102,1710	0/0:22,0:22:60.19:0,60,1056	0/0:16,0:16:48.16:0,48,893	0/0:15,0:15:42.14:0,42,766	0/0:19,0:19:57.19:0,57,1044	0/0:25,0:25:75.23:0,75,1320	0/0:28,0:28:84.26:0,84,1478	0/0:13,0:13:30.10:0,30,458	0/0:19,0:18:26.66:0,27,458	1/1:8,4:11:32.04:292,32,0	1/1:9,4:14:1.09:118,1,0	0/1:15,0:14:4.16:57,0,4	0/0:17,0:17:51.16:0,51,871	0/0:14,0:14:33.57:0,34,471	0/0:17,0:17:24.78:0,25,302	0/0:20,0:20:60.20:0,60,1089	0/1:20,9:28:40.16:526,0,40	1/1:16,10:27:17.54:353,18,0	1/1:12,6:18:27.01:337,27,0
chr10	69788720	.	TCTC	T	3062.22	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.360;DP=642;FS=6.212;HRun=0;HaplotypeScore=96.2320;InbreedingCoeff=0.9998;MQ=77.10;MQ0=1;MQRankSum=-2.533;QD=33.29;ReadPosRankSum=4.981;VQSLOD=3.7423;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.21:0,78,1702	1/1:0,11:11:30.10:511,30,0	0/0:34,0:32:84:0,84,1601	0/0:28,0:20:36.82:0,37,766	0/0:34,0:34:99:0,99,2084	0/0:33,0:33:99:0,99,2192	0/0:24,0:24:69.21:0,69,1449	0/0:33,0:32:99:0,99,2166	0/0:13,0:13:39.10:0,39,768	0/0:25,0:25:69.21:0,69,1400	0/0:21,0:21:60.16:0,60,1232	0/0:20,0:20:60.20:0,60,1336	0/0:31,0:31:90.31:0,90,2047	0/0:21,0:21:63.22:0,63,1413	0/0:15,0:15:45.13:0,45,916	0/0:22,0:22:63.14:0,63,1116	1/1:1,20:21:48.16:800,48,0	1/1:0,16:16:39.09:631,39,0	0/0:17,0:17:51.12:0,51,955	0/0:25,0:25:75.26:0,75,1702	0/0:17,0:17:48.10:0,48,971	0/0:19,0:19:57.17:0,57,1195	1/1:2,17:19:38.95:631,39,0	1/1:5,20:25:39.13:664,39,0	0/0:25,0:25:72.18:0,72,1407	0/0:26,0:26:72.24:0,72,1602	0/0:24,0:24:72.22:0,72,1561	0/0:16,0:16:45.10:0,45,902
chr10	69789234	.	C	CA	5116.62	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-15.128;DP=744;FS=0.000;HRun=7;HaplotypeScore=68.8057;InbreedingCoeff=0.9996;MQ=76.52;MQ0=0;MQRankSum=0.710;QD=29.92;ReadPosRankSum=-1.289;VQSLOD=4.7767;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,102,970	0/0:15,0:15:36.04:0,36,341	0/0:18,0:18:29.52:0,30,265	0/0:13,0:14:26.84:0,27,235	0/0:38,0:38:99:0,99,922	0/0:17,0:17:42.07:0,42,406	0/0:16,0:16:42:0,42,390	1/1:6,27:33:78.23:931,78,0	0/0:25,0:25:63.10:0,63,608	0/0:35,0:35:78.09:0,78,744	0/0:17,0:17:45.06:0,45,430	0/0:31,0:31:81.11:0,81,778	0/0:24,0:24:66:0,66,618	0/0:27,0:27:72.11:0,72,695	0/0:39,0:39:99:0,102,980	0/0:26,0:26:78.11:0,78,747	0/0:30,0:30:87.13:0,87,835	0/0:21,0:21:57.02:0,57,535	1/1:4,11:15:36.08:408,36,0	1/1:5,23:28:66.20:797,66,0	1/1:3,27:30:78.24:942,78,0	0/0:42,0:42:99:0,117,1129	0/0:30,0:30:78.11:0,78,749	0/0:36,0:36:99:0,105,1002	0/0:31,0:30:81.10:0,81,772	1/1:5,19:24:34.18:672,34,0	1/1:4,25:29:78.23:932,78,0	1/1:0,12:12:36.11:435,36,0
chr10	69789842	.	TTATATATATA	T	1135.48	PASS	AB=0.896;AC=15;AF=0.682;AN=22;BaseQRankSum=3.162;DP=197;FS=8.243;HRun=0;HaplotypeScore=64.6199;InbreedingCoeff=-0.0021;MQ=67.39;MQ0=3;MQRankSum=-1.183;QD=9.62;ReadPosRankSum=-0.314;VQSLOD=0.2043;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,1:11:3.01:90,3,0	1/1:5,0:5:2.99:24,3,0	./.	./.	1/1:4,6:10:11.97:221,12,0	./.	./.	0/1:41,0:41:2.39:201,0,2	./.	0/0:10,0:10:3.01:0,3,81	./.	./.	./.	./.	./.	./.	1/1:8,9:17:3.01:89,3,0	1/1:6,4:10:3.01:90,3,0	0/0:6,0:5:2.68:0,3,11	./.	./.	./.	./.	./.	./.	1/1:4,0:4:2.99:24,3,0	0/1:6,1:7:13.96:84,0,14	0/1:10,3:13:16.63:406,0,17
chr10	69790363	.	GA	G	8524.35	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=15.838;DP=639;FS=0.961;HRun=7;HaplotypeScore=65.2749;InbreedingCoeff=0.9994;MQ=84.41;MQ0=0;MQRankSum=-6.353;QD=26.31;ReadPosRankSum=0.482;VQSLOD=5.4005;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:34:91.26:972,91,0	1/1:3,8:11:24.05:245,24,0	0/0:24,0:24:57.18:0,57,700	0/0:15,0:15:31.32:0,31,376	1/1:3,24:27:69.15:704,69,0	0/0:30,0:30:81.26:0,81,1019	0/0:16,0:16:39.10:0,39,465	1/1:5,26:31:75.10:743,75,0	0/0:19,0:19:57.18:0,57,717	0/0:24,0:24:60.19:0,60,755	0/0:13,0:13:39.12:0,39,491	0/0:21,0:21:60.18:0,60,741	0/0:33,0:33:93.28:0,93,1157	0/0:24,0:24:63.20:0,63,793	0/0:21,0:21:57.18:0,57,717	0/0:28,0:28:78.24:0,78,969	1/1:2,15:17:39.08:398,39,0	1/1:0,14:14:36.08:367,36,0	1/1:1,21:22:63.10:624,63,0	1/1:2,34:36:99:996,99,0	1/1:0,16:16:42.10:428,42,0	0/0:26,0:26:72.22:0,72,893	1/1:3,20:23:60.13:612,60,0	1/1:3,11:14:33.07:337,33,0	0/0:21,0:21:57.15:0,57,700	1/1:0,27:27:81.16:814,81,0	1/1:3,36:38:99:1010,99,0	1/1:1,12:13:27.06:275,27,0
chr10	69791453	.	TACAC	T	4649.90	PASS	AC=24;AF=0.462;AN=52;BaseQRankSum=5.711;DP=402;FS=4.942;HRun=0;HaplotypeScore=74.4369;InbreedingCoeff=0.9731;MQ=83.34;MQ0=4;MQRankSum=-4.130;QD=31.00;ReadPosRankSum=0.553;VQSLOD=3.9474;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:7:15.05:236,15,0	1/1:3,0:3:9.01:95,9,0	0/0:30,0:21:56.75:0,57,982	0/0:27,0:18:41.87:0,42,665	./.	0/0:16,0:15:42.14:0,42,665	0/0:11,0:10:27.09:0,27,407	1/1:0,13:13:36.06:484,36,0	0/0:9,0:9:18.06:0,18,296	0/0:18,0:18:42.12:0,42,668	0/0:6,0:6:15.05:0,15,237	0/0:16,0:16:30.10:0,30,480	0/0:16,0:16:48.11:0,48,689	0/0:13,0:13:24.08:0,24,390	0/0:16,0:16:39.13:0,39,635	0/0:25,0:24:60.06:0,60,954	1/1:15,0:15:39.13:547,39,0	1/1:14,0:14:33.11:491,33,0	1/1:9,0:9:24.04:365,24,0	1/1:0,14:14:9.03:109,9,0	1/1:15,0:12:24.07:347,24,0	0/0:11,0:11:30.10:0,30,474	./.	1/1:21,0:20:30.10:443,30,0	0/0:14,0:14:33.11:0,33,528	1/1:1,23:24:66.20:1006,66,0	1/1:8,0:8:18.06:247,18,0	1/1:6,0:6:18.06:280,18,0
chr10	69791587	.	AG	A	476.54	PASS	AB=0.807;AC=11;AF=0.212;AN=52;BaseQRankSum=7.582;DP=429;FS=8.345;HRun=1;HaplotypeScore=67.0316;InbreedingCoeff=0.2451;MQ=38.97;MQ0=64;MQRankSum=-3.801;QD=4.58;ReadPosRankSum=-0.865;VQSLOD=-0.4671;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:3:5.09:19,5,0	0/0:4,0:2:6.02:0,6,87	./.	./.	1/1:8,0:5:5.27:21,5,0	0/0:19,0:16:26.19:0,26,421	0/0:17,0:8:21.07:0,21,282	0/0:17,0:11:31.48:0,31,346	0/0:12,0:11:30.10:0,30,441	0/0:32,0:28:78.15:0,78,1053	0/0:23,0:19:46.38:0,46,625	0/0:20,0:19:54.17:0,54,770	0/0:20,0:17:45.08:0,45,619	0/0:23,0:21:36.04:0,36,517	0/0:28,0:26:60.08:0,60,874	0/0:28,0:28:68.41:0,68,925	0/0:7,0:3:6.02:0,6,85	0/0:9,0:3:9.03:0,9,116	0/1:9,4:5:30.50:137,0,30	0/1:18,5:20:99:167,0,209	1/1:1,1:1:3.01:39,3,0	0/0:18,0:17:42.14:0,42,599	0/0:8,0:5:11.91:0,12,151	0/0:13,0:5:2.04:0,2,6	0/0:25,0:25:56.28:0,56,751	0/1:22,4:24:99:141,0,474	0/1:8,4:9:29.76:57,0,30	0/1:8,2:7:35.61:36,0,40
chr10	69791596	.	AG	A	738.42	PASS	AB=0.794;AC=9;AF=0.167;AN=54;BaseQRankSum=5.928;DP=475;FS=10.572;HRun=1;HaplotypeScore=71.8623;InbreedingCoeff=0.1893;MQ=39.78;MQ0=62;MQRankSum=-6.434;QD=6.97;ReadPosRankSum=0.998;VQSLOD=-0.2837;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,1:3:7.99:8,0,11	0/0:5,0:3:6.01:0,6,72	./.	0/0:10,1:2:3.01:0,3,43	1/1:7,1:6:5.69:30,6,0	0/0:22,0:19:37.24:0,37,528	0/0:19,0:10:24.55:0,25,330	0/1:9,12:15:17.03:454,0,17	0/0:13,0:12:36.12:0,36,527	0/0:34,0:31:90.20:0,90,1240	0/0:21,0:18:45.11:0,45,585	0/0:25,0:24:69.20:0,69,954	0/0:20,0:18:48.16:0,48,689	0/0:24,0:22:38.95:0,39,514	0/0:30,0:28:69.02:0,69,956	0/0:32,0:31:77.44:0,77,1052	0/0:6,0:3:6.02:0,6,85	0/0:10,0:4:6.02:0,6,85	0/0:15,0:7:12.33:0,12,112	0/1:18,5:20:94.84:95,0,140	1/1:2,0:1:2.50:9,2,0	0/0:20,0:19:48.15:0,48,671	0/0:8,0:5:14.70:0,15,160	0/0:13,0:6:0:0,0,1	0/0:25,0:25:57.57:0,58,807	0/1:20,8:25:99:262,0,321	0/1:12,3:12:6.23:6,0,79	0/0:7,3:7:6:0,6,54
chr10	69791647	.	G	GGGAGA	4694.53	PASS	AB=0.667;AC=27;AF=0.482;AN=56;BaseQRankSum=8.544;DP=665;FS=26.529;HRun=0;HaplotypeScore=122.9765;InbreedingCoeff=0.8215;MQ=55.40;MQ0=27;MQRankSum=-6.653;QD=24.07;ReadPosRankSum=-5.488;VQSLOD=1.6253;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,8:12:9.03:247,9,0	1/1:6,2:6:6.02:172,6,0	0/0:96,0:23:8.99:0,9,305	0/0:98,0:20:3.38:0,3,221	1/1:5,15:21:27.09:761,27,0	0/0:26,0:26:57.20:0,57,1063	0/0:20,0:20:42.14:0,42,785	1/1:18,0:21:23.99:385,24,0	0/0:16,0:16:33.08:0,33,582	0/0:26,0:26:39.13:0,39,713	0/0:19,0:19:36.12:0,36,672	0/0:22,0:22:45.14:0,45,804	0/0:22,0:22:42.14:0,42,785	0/0:20,0:20:48.10:0,48,829	0/0:31,0:31:72.25:0,72,1347	0/0:34,0:34:72.18:0,72,1251	1/1:2,5:7:12.04:336,12,0	1/1:1,8:11:9.03:249,9,0	1/1:12,2:16:18.03:294,18,0	1/1:9,7:16:6.02:171,6,0	0/1:6,6:11:46.85:163,0,47	0/0:24,0:24:54.17:0,54,962	1/1:1,10:12:21.07:600,21,0	1/1:6,9:15:6.02:124,6,0	0/0:13,0:13:24.08:0,24,425	1/1:10,6:17:21.07:514,21,0	1/1:8,5:12:9.03:247,9,0	1/1:3,5:8:15.05:430,15,0
chr10	69792313	.	ATTT	A	2799.02	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=2.372;DP=564;FS=1.990;HRun=14;HaplotypeScore=94.5131;InbreedingCoeff=0.9786;MQ=74.72;MQ0=0;MQRankSum=-3.155;QD=22.76;ReadPosRankSum=4.540;VQSLOD=3.1190;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:33:77.81:0,78,702	0/0:2,0:6:12.04:0,12,170	0/0:18,0:18:24.97:0,25,368	0/0:14,0:13:23.68:0,24,227	0/0:6,0:16:31.11:0,31,265	0/0:24,0:24:63.22:0,63,1133	0/0:23,0:27:60.18:0,60,1015	0/0:8,0:21:47.50:0,48,412	0/0:16,0:17:48.12:0,48,781	0/0:18,0:19:51.16:0,51,867	0/0:21,0:21:48.13:0,48,767	0/0:20,0:22:51.13:0,51,829	0/0:17,0:17:39.13:0,39,682	0/0:16,0:18:36.12:0,36,625	0/0:16,0:17:48.16:0,48,824	0/0:20,0:20:39.13:0,39,690	0/0:6,0:38:65.96:0,66,935	0/0:3,0:14:27.09:0,27,387	1/1:3,13:16:31.25:342,31,0	1/1:6,19:26:50.91:578,51,0	1/1:5,18:23:41.98:491,42,0	0/0:16,0:19:54.14:0,54,856	0/0:6,0:15:27.54:0,28,359	0/0:8,0:23:27.07:0,27,379	0/0:15,0:17:45.13:0,45,767	1/1:5,21:26:9.70:678,10,0	1/1:2,23:26:62.99:719,63,0	1/1:1,5:6:15.04:175,15,0
chr10	69792864	.	GT	G	6798.35	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=9.842;DP=607;FS=5.404;HRun=9;HaplotypeScore=65.7898;InbreedingCoeff=0.9973;MQ=79.48;MQ0=1;MQRankSum=-3.735;QD=21.79;ReadPosRankSum=1.552;VQSLOD=5.8182;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:99:933,102,0	1/1:2,5:7:15:137,15,0	0/0:17,0:18:47.83:0,48,487	0/0:24,0:23:47.66:0,48,458	1/1:3,26:29:71.94:642,72,0	0/0:16,0:16:48.14:0,48,554	0/0:19,0:19:54.16:0,54,623	1/1:20,12:32:26.24:387,26,0	0/0:19,0:19:54.15:0,54,613	0/0:22,0:22:54.11:0,54,593	0/0:25,0:25:69.16:0,69,764	0/0:36,0:36:99:0,99,1104	0/0:25,1:26:35.70:0,36,638	0/0:16,0:16:48.14:0,48,545	0/0:27,0:27:72.21:0,72,831	0/0:14,0:14:39.12:0,39,450	1/1:6,22:28:57.01:521,57,0	1/1:0,16:16:48.03:439,48,0	1/1:5,20:26:62.05:550,62,0	1/1:3,20:23:53.76:478,54,0	1/1:3,25:28:66.03:604,66,0	0/0:15,0:15:36.11:0,36,415	1/1:2,14:16:42.02:384,42,0	1/1:1,21:22:63.03:576,63,0	0/0:18,0:18:51.13:0,51,570	1/1:2,16:18:48.01:433,48,0	1/1:4,18:22:54.03:492,54,0	1/1:2,8:10:24.01:220,24,0
chr10	69793242	.	A	AACAC	1523.73	PASS	AB=0.943;AC=21;AF=0.457;AN=46;BaseQRankSum=0.050;DP=496;FS=0.944;HRun=0;HaplotypeScore=113.7276;InbreedingCoeff=0.2333;MQ=65.57;MQ0=6;MQRankSum=-2.158;QD=5.93;ReadPosRankSum=-0.083;VQSLOD=2.5197;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:25:6:0,6,52	./.	./.	./.	0/0:14,0:13:3.01:0,3,46	0/0:15,0:16:4.54:0,5,183	0/1:25,0:25:3.19:3,0,28	1/1:25,0:25:0.47:1,0,0	0/1:10,0:10:0:0,0,0	0/0:16,0:15:1.94:0,2,14	0/0:20,0:23:8.98:0,9,64	./.	0/0:10,0:10:3:0,3,25	0/1:11,0:13:14.90:15,0,22	0/0:15,0:18:5.93:0,6,74	0/1:10,0:14:12.56:42,0,13	1/1:30,2:33:42.52:629,43,0	1/1:10,0:10:3.95:50,4,0	./.	1/1:12,0:12:3.01:70,3,0	0/1:18,0:18:0.93:62,0,1	0/1:11,1:14:16.90:121,0,17	0/0:12,0:12:2.18:0,2,7	1/1:22,10:35:5.81:140,6,0	0/0:20,0:21:9.88:0,10,98	1/1:23,0:22:9.05:81,9,0	0/1:15,0:14:5.90:137,0,6	1/1:9,0:9:18.06:311,18,0
chr10	69793414	.	GT	G	2847.56	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=0.331;DP=353;FS=1.863;HRun=1;HaplotypeScore=48.8464;InbreedingCoeff=0.9596;MQ=70.38;MQ0=0;MQRankSum=-1.127;QD=15.82;ReadPosRankSum=-3.280;VQSLOD=2.5037;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,2:20:37.16:327,37,0	1/1:8,2:10:27.45:214,27,0	0/0:15,1:14:15.90:0,16,280	0/0:18,0:17:25.02:0,25,368	1/1:8,0:8:16.99:125,17,0	0/0:11,0:11:26.81:0,27,208	0/0:13,0:13:27.42:0,27,327	1/1:13,0:14:35.94:301,36,0	0/0:14,0:14:34.71:0,35,385	0/0:8,0:8:20.63:0,21,208	0/0:8,0:8:18:0,18,184	0/0:8,0:8:23.88:0,24,227	0/0:7,0:7:18.83:0,19,203	0/0:14,0:14:38.57:0,39,322	0/0:14,0:14:38.98:0,39,390	0/0:18,0:18:48.02:0,48,570	1/1:0,19:20:18.05:228,18,0	1/1:13,9:26:64.38:682,64,0	1/1:8,0:8:15.40:121,15,0	1/1:9,1:10:17.71:132,18,0	1/1:8,0:8:15.86:123,16,0	0/0:11,0:11:23.89:0,24,235	1/1:12,2:14:25.02:194,25,0	1/1:0,10:11:14.93:147,15,0	0/0:13,0:13:29.98:0,30,329	1/1:14,1:15:5.67:288,6,0	1/1:12,0:11:22.05:132,22,0	1/1:4,0:4:8.41:62,8,0
chr10	69793808	.	GGTGT	G	9606.48	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=17.215;DP=706;FS=4.864;HRun=0;HaplotypeScore=139.1274;InbreedingCoeff=0.9894;MQ=85.62;MQ0=3;MQRankSum=-4.750;QD=28.68;ReadPosRankSum=2.900;VQSLOD=4.5368;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,52:55:99:2484,132,0	1/1:0,6:6:18.06:337,18,0	0/0:28,0:28:81.23:0,81,2006	0/0:21,0:21:60.04:0,60,1432	1/1:0,24:22:51.13:898,51,0	0/0:28,0:28:84.29:0,84,2121	0/0:26,0:26:78.25:0,78,1977	1/1:26,0:26:61.52:470,62,0	0/0:31,0:31:90.31:0,90,2304	0/0:26,0:26:75.25:0,75,1865	0/0:16,0:16:39.13:0,39,1012	0/0:32,0:32:96.33:0,96,2402	0/0:26,0:26:78.27:0,78,1986	0/0:35,0:35:99:0,99,2535	0/0:32,0:32:90.31:0,90,2366	0/0:30,0:30:90.31:0,90,2300	1/1:0,31:31:69.15:1236,69,0	1/1:2,10:12:18.06:342,18,0	1/1:17,0:17:50.48:350,50,0	1/1:13,0:13:26.68:193,27,0	1/1:41,0:41:74.14:493,74,0	0/0:22,0:22:60.21:0,60,1534	1/1:1,17:17:35.80:678,36,0	1/1:1,24:25:51.17:968,51,0	0/0:18,0:18:54.19:0,54,1428	1/1:31,0:31:32.30:525,32,0	1/1:33,0:32:82.67:575,83,0	1/1:3,0:3:8.89:58,9,0
chr10	69793809	.	GTGT	G	10563.30	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=16.978;DP=700;FS=5.352;HRun=0;HaplotypeScore=121.2427;InbreedingCoeff=0.9897;MQ=85.80;MQ0=3;MQRankSum=-4.420;QD=32.11;ReadPosRankSum=2.765;VQSLOD=5.3866;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:54,0:54:99:1196,111,0	1/1:6,0:6:18.01:163,18,0	0/0:28,0:28:84.24:0,84,1816	0/0:21,0:21:60.04:0,60,1285	1/1:24,0:22:50.77:464,51,0	0/0:28,0:28:84.29:0,84,1899	0/0:27,0:27:81.28:0,81,1807	1/1:0,23:24:69.21:1150,69,0	0/0:31,0:31:90.31:0,90,2019	0/0:25,0:25:75.26:0,75,1661	0/0:15,0:15:39.13:0,39,895	0/0:32,0:32:96.33:0,96,2145	0/0:27,0:27:81.28:0,81,1806	0/0:35,0:35:99:0,102,2271	0/0:32,0:32:90.30:0,90,2075	0/0:30,0:30:90.31:0,90,2021	1/1:31,0:31:69.01:627,69,0	1/1:12,0:12:18.02:168,18,0	1/1:0,17:17:51.16:916,51,0	1/1:1,12:13:29.42:473,29,0	1/1:0,39:39:75.26:1395,75,0	0/0:20,0:20:60.21:0,60,1342	1/1:18,0:17:35.97:349,36,0	1/1:25,0:25:30.53:452,31,0	0/0:20,0:20:57.20:0,57,1306	1/1:1,29:30:36.62:1515,37,0	1/1:1,32:32:84.29:1529,84,0	1/1:0,3:3:9.03:167,9,0
chr10	69794774	.	G	GA	9017.10	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=11.375;DP=619;FS=14.148;HRun=7;HaplotypeScore=80.5614;InbreedingCoeff=0.9994;MQ=79.01;MQ0=0;MQRankSum=-2.080;QD=30.36;ReadPosRankSum=1.215;VQSLOD=3.8001;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:27:69.19:819,69,0	1/1:0,10:10:30.09:362,30,0	0/0:16,0:16:28.82:0,29,370	0/0:26,0:24:44.44:0,44,399	1/1:4,29:33:81.25:979,81,0	0/0:27,0:27:72.03:0,72,673	0/0:20,0:20:57.09:0,57,550	1/1:2,36:39:99:1257,108,0	0/0:21,0:21:60.08:0,60,574	0/0:23,0:23:66.10:0,66,637	0/0:27,0:27:72.11:0,72,695	0/0:18,0:18:54.09:0,54,521	0/0:24,0:24:57.09:0,57,550	0/0:16,0:16:39.06:0,39,376	0/0:32,0:32:90.09:0,90,859	0/0:26,0:26:69.09:0,69,661	1/1:1,21:22:54.17:652,54,0	1/1:0,12:12:30.09:362,30,0	1/1:5,16:21:48.15:579,48,0	1/1:2,20:22:57.17:689,57,0	1/1:3,12:15:36.11:435,36,0	0/0:24,0:24:69.08:0,69,655	1/1:0,16:16:39.12:471,39,0	1/1:0,19:19:54.17:652,54,0	0/0:22,0:21:66.11:0,66,637	1/1:6,29:35:40.76:998,41,0	1/1:3,15:18:39.12:471,39,0	1/1:0,8:8:24.07:290,24,0
chr10	69794968	.	C	CA	12806.75	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-15.626;DP=683;FS=0.291;HRun=3;HaplotypeScore=63.5353;InbreedingCoeff=0.9999;MQ=87.02;MQ0=0;MQRankSum=-2.085;QD=35.28;ReadPosRankSum=1.860;VQSLOD=5.4392;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:75.25:1050,75,0	1/1:0,12:12:36.12:504,36,0	0/0:20,0:20:50.91:0,51,556	0/0:26,1:27:37.23:0,37,595	1/1:2,36:38:99:1341,99,0	0/0:29,0:29:84.26:0,84,1007	0/0:18,0:18:48.13:0,48,564	1/1:0,28:28:81.21:1052,81,0	0/0:18,0:18:51.16:0,51,611	0/0:24,0:24:69.20:0,69,817	0/0:17,0:17:45.14:0,45,539	0/0:21,0:21:63.16:0,63,721	0/0:17,0:17:51.14:0,51,600	0/0:28,0:28:81.22:0,81,948	0/0:28,0:28:75.22:0,75,889	0/0:30,0:30:84.17:0,84,946	1/1:4,28:32:72.20:986,72,0	1/1:2,29:31:75.25:1050,75,0	1/1:4,13:17:39.10:498,39,0	1/1:1,28:29:81.18:1089,81,0	1/1:0,23:23:66.22:924,66,0	0/0:23,0:23:66.17:0,66,761	1/1:1,19:20:39.04:546,39,0	1/1:1,23:24:54.18:756,54,0	0/0:20,0:20:60.18:0,60,720	1/1:3,31:34:90.27:1212,90,0	1/1:0,28:29:81.27:1132,81,0	1/1:4,15:19:48.16:667,48,0
chr10	69800543	.	CT	C	4017.48	PASS	AB=0.903;AC=25;AF=0.446;AN=56;BaseQRankSum=9.237;DP=621;FS=0.692;HRun=11;HaplotypeScore=74.0982;InbreedingCoeff=0.7448;MQ=71.88;MQ0=1;MQRankSum=-1.502;QD=13.53;ReadPosRankSum=3.009;VQSLOD=3.9740;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:23:51.36:0,51,268	1/1:0,8:8:20.98:172,21,0	0/0:13,0:11:7.55:0,8,92	0/1:11,1:10:14.61:15,0,55	0/0:8,0:30:63.45:0,63,354	0/0:25,1:26:32.50:0,33,551	0/0:21,2:23:10.86:0,11,527	0/0:39,0:39:72.65:0,73,768	0/0:23,1:24:35.51:0,36,583	0/1:32,5:37:26.09:26,0,749	0/0:21,1:22:32.54:0,33,551	0/0:17,1:18:26.47:0,26,479	0/0:18,0:18:42.02:0,42,417	0/0:15,1:16:17.46:0,17,390	0/1:26,3:29:4.83:5,0,550	0/0:28,1:29:47.51:0,48,697	1/1:2,20:22:50.93:419,51,0	1/1:6,20:26:50.93:419,51,0	1/1:2,10:12:26.91:214,27,0	1/1:7,29:37:75.03:704,75,0	1/1:2,17:19:50.94:419,51,0	0/0:19,1:20:23.48:0,23,455	1/1:3,14:17:3.94:238,4,0	1/1:1,9:12:31.04:233,31,0	0/0:21,2:23:4.85:0,5,456	1/1:2,22:24:36.88:501,37,0	1/1:4,26:32:63.99:504,64,0	1/1:0,10:10:17.98:148,18,0
chr10	69801711	.	TAG	T	3612.32	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.859;DP=710;FS=7.596;HRun=0;HaplotypeScore=90.0078;InbreedingCoeff=0.9977;MQ=84.88;MQ0=0;MQRankSum=-3.242;QD=31.69;ReadPosRankSum=2.671;VQSLOD=5.4777;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.32:0,93,1615	0/0:8,0:8:18.06:0,18,315	0/0:34,0:34:79.87:0,80,1093	0/0:35,0:34:50.40:0,50,1089	0/0:22,0:22:60.19:0,60,1017	0/0:25,0:25:72.25:0,72,1257	0/0:35,0:35:99:0,102,1775	0/0:28,0:28:78.26:0,78,1325	0/0:12,0:12:36.12:0,36,612	0/0:30,0:30:90.31:0,90,1566	0/0:22,0:22:57.20:0,57,994	0/0:31,0:31:87.30:0,87,1508	0/0:36,0:36:99:0,105,1836	0/0:23,0:23:63.22:0,63,1101	0/0:23,0:23:60.21:0,60,1052	0/0:23,0:23:63.20:0,63,1074	1/1:5,33:38:90.30:1218,90,0	1/1:5,21:26:48.16:649,48,0	0/0:16,0:16:42.10:0,42,688	0/0:22,0:22:60.21:0,60,1052	0/0:24,0:24:69.24:0,69,1210	0/0:26,0:26:66.19:0,66,1122	1/1:1,15:16:36.12:487,36,0	1/1:2,32:34:93.10:1258,93,0	0/0:13,0:13:39.12:0,39,656	0/0:21,0:21:53.86:0,54,944	0/0:31,0:30:81.28:0,81,1404	0/0:21,0:21:63.22:0,63,1104
chr10	69806842	.	G	GGT	444.48	PASS	AB=0.930;AC=15;AF=0.300;AN=50;BaseQRankSum=-1.007;DP=681;FS=3.048;HRun=0;HaplotypeScore=113.5435;InbreedingCoeff=-0.0041;MQ=59.15;MQ0=10;MQRankSum=1.108;QD=1.53;ReadPosRankSum=-2.472;VQSLOD=1.7315;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:31:4.67:0,5,19	1/1:8,0:8:8.96:86,9,0	./.	./.	./.	0/0:23,0:23:9.86:0,10,138	0/0:31,0:32:6.99:0,7,54	1/1:22,0:21:2.90:16,3,0	0/0:14,0:14:17.66:0,18,146	0/1:19,0:19:12.17:12,0,111	0/0:15,0:15:2.99:0,3,25	0/0:23,0:23:23.46:0,23,191	0/0:17,0:20:14.37:0,14,130	0/0:22,0:22:5.18:0,5,22	0/0:35,0:34:2.90:0,3,175	0/1:20,1:23:14.42:14,0,237	0/0:30,0:32:27.78:0,28,217	0/1:21,1:22:23.57:24,0,149	0/1:22,0:22:13.48:52,0,13	0/1:13,1:14:26.39:38,0,26	1/1:55,19:76:8.52:132,9,0	0/0:17,0:18:14.86:0,15,137	0/1:16,0:16:28.31:40,0,28	0/0:45,0:45:5.97:0,6,380	0/0:18,0:21:13.21:0,13,109	0/1:23,0:23:21.70:84,0,22	0/1:19,8:26:19.91:74,0,20	0/1:12,0:17:8.10:20,0,8
chr10	69813774	.	CG	C	1211.59	PASS	AB=0.754;AC=6;AF=0.107;AN=56;BaseQRankSum=10.284;DP=558;FS=4.371;HRun=3;HaplotypeScore=124.0801;InbreedingCoeff=0.2005;MQ=67.85;MQ0=1;MQRankSum=-9.781;QD=10.27;ReadPosRankSum=-0.102;VQSLOD=1.3440;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.31:0,96,1360	0/0:6,0:6:18.06:0,18,258	0/0:22,0:17:37.41:0,37,448	0/0:16,0:14:23.15:0,23,280	0/0:18,0:18:51.14:0,51,706	0/0:20,0:20:54.15:0,54,739	0/0:26,0:26:72.17:0,72,974	0/0:19,2:21:0.38:0,0,289	0/0:16,0:16:45.15:0,45,645	0/0:18,0:18:51.16:0,51,716	0/0:13,0:13:36.07:0,36,476	0/0:17,0:17:45.15:0,45,644	0/0:20,0:20:60.20:0,60,862	0/0:24,0:24:72.24:0,72,1021	0/0:16,0:16:48.12:0,48,666	0/0:21,0:21:63.15:0,63,818	0/0:33,0:33:99:0,99,1383	0/0:17,0:17:51.04:0,51,683	0/1:19,3:20:62.49:62,0,267	0/1:17,13:30:99:351,0,147	0/0:9,0:9:5.97:0,6,48	0/0:15,0:15:45.10:0,45,605	0/0:16,0:16:39.12:0,39,540	0/0:28,0:28:78.24:0,78,1075	0/0:12,0:12:30.10:0,30,431	0/1:18,12:30:99:355,0,266	0/1:18,11:29:99:346,0,197	1/1:2,5:7:20.28:226,20,0
chr10	69813806	.	C	CA	4594.62	PASS	AB=0.615;AC=9;AF=0.161;AN=56;BaseQRankSum=14.148;DP=581;FS=0.800;HRun=0;HaplotypeScore=114.8758;InbreedingCoeff=0.3159;MQ=76.97;MQ0=0;MQRankSum=-11.771;QD=26.56;ReadPosRankSum=2.355;VQSLOD=5.3117;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1529	0/0:3,0:3:9.03:0,9,126	0/0:31,0:30:83.89:0,84,1064	0/0:20,0:20:50.84:0,51,658	0/0:18,0:18:51.16:0,51,689	0/0:15,0:15:39.09:0,39,522	0/0:22,0:22:63.21:0,63,875	0/1:24,19:43:99:696,0,681	0/0:18,0:18:51.13:0,51,686	0/0:12,0:12:33.11:0,33,460	0/0:14,0:14:42.14:0,42,585	0/0:20,0:20:60.19:0,60,819	0/0:24,0:24:69.23:0,69,958	0/0:15,0:15:42.14:0,42,583	0/0:16,0:16:42.14:0,42,586	0/0:22,0:22:66.17:0,66,884	0/0:29,0:29:80.88:0,81,1110	0/0:19,0:19:57.19:0,57,795	0/1:13,14:26:99:616,0,303	0/1:8,19:27:99:804,0,171	0/1:2,10:12:60.21:219,0,60	0/0:14,0:14:42.14:0,42,586	0/0:19,0:19:54.12:0,54,704	0/0:23,0:23:69.14:0,69,903	0/0:15,0:15:45.06:0,45,569	0/1:10,22:32:99:977,0,239	1/1:2,24:27:13.47:1069,13,0	1/1:1,4:5:15.03:213,15,0
chr10	69814385	.	GA	G	5317.86	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.244;DP=738;FS=9.772;HRun=2;HaplotypeScore=118.4844;InbreedingCoeff=0.9998;MQ=89.15;MQ0=0;MQRankSum=-2.277;QD=31.47;ReadPosRankSum=-0.097;VQSLOD=3.2578;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,1883	1/1:0,11:11:30.10:389,30,0	0/0:32,0:32:91.84:0,92,1316	0/0:28,0:28:81.24:0,81,1184	0/0:26,0:26:75.25:0,75,1121	0/0:30,0:30:90.30:0,90,1330	0/0:35,0:35:99:0,105,1570	1/1:2,36:38:84.25:1073,84,0	0/0:28,0:28:84.27:0,84,1235	0/0:27,0:27:81.27:0,81,1215	0/0:22,0:22:66.22:0,66,983	0/0:30,0:30:90.30:0,90,1347	0/0:19,0:19:54.18:0,54,808	0/0:25,0:25:75.25:0,75,1124	0/0:41,0:41:99:0,123,1843	0/0:38,0:38:99:0,108,1601	0/0:27,0:27:81.27:0,81,1211	0/0:20,0:20:57.17:0,57,826	1/1:3,21:24:48:623,48,0	1/1:2,16:18:42.14:545,42,0	1/1:1,30:31:81.26:1052,81,0	0/0:31,0:31:87.29:0,87,1304	0/0:23,0:23:66.21:0,66,970	0/0:31,0:31:93.32:0,93,1393	0/0:14,0:14:42.14:0,42,630	1/1:1,18:19:54.18:701,54,0	1/1:0,15:15:38.99:506,39,0	1/1:0,13:13:33.11:428,33,0
chr10	69815192	.	C	CA	6301.16	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.716;DP=762;FS=0.000;HRun=0;HaplotypeScore=91.1470;InbreedingCoeff=0.9991;MQ=84.94;MQ0=0;MQRankSum=-1.616;QD=45.33;ReadPosRankSum=1.982;VQSLOD=4.7524;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,1904	1/1:0,13:13:39.13:621,39,0	0/0:23,0:23:69.22:0,69,940	0/0:25,0:25:69.05:0,69,907	0/0:33,0:33:87.28:0,87,1188	0/0:28,0:28:84.22:0,84,1127	0/0:30,0:30:87.29:0,87,1209	1/1:1,35:36:99:1607,105,0	0/0:21,0:21:63.21:0,63,877	0/0:28,0:28:81.27:0,81,1131	0/0:17,0:17:48.16:0,48,669	0/0:34,0:34:99:0,102,1396	0/0:30,0:30:81.27:0,81,1131	0/0:25,0:25:75.22:0,75,1023	0/0:31,0:31:90.25:0,90,1214	0/0:38,0:38:99:0,114,1591	1/1:0,19:19:51.17:813,51,0	1/1:0,23:23:66.23:1055,66,0	0/0:15,0:15:36.12:0,36,502	0/0:19,0:19:54.18:0,54,754	0/0:31,0:31:84.23:0,84,1148	0/0:34,0:34:99:0,102,1420	1/1:0,21:21:63.21:1006,63,0	1/1:1,26:27:75.26:1198,75,0	0/0:32,0:32:96.32:0,96,1336	0/0:46,0:46:99:0,135,1847	0/0:28,0:28:81.27:0,81,1129	0/0:7,0:7:21.07:0,21,293
chr10	69815660	.	A	AG	6224.27	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.523;DP=676;FS=2.970;HRun=2;HaplotypeScore=83.6304;InbreedingCoeff=1.0000;MQ=82.73;MQ0=0;MQRankSum=-1.545;QD=37.72;ReadPosRankSum=0.632;VQSLOD=5.3681;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,129,1584	1/1:0,16:16:39.13:561,39,0	0/0:21,0:21:60.19:0,60,744	0/0:17,0:17:48.14:0,48,585	0/0:29,0:29:84.26:0,84,1041	0/0:25,0:25:75.21:0,75,904	0/0:20,0:20:51.14:0,51,619	1/1:2,28:30:81.25:1129,81,0	0/0:24,0:24:60.19:0,60,744	0/0:20,0:20:57.17:0,57,696	0/0:18,0:18:54.17:0,54,669	0/0:23,0:23:66.21:0,66,818	0/0:26,0:26:69.22:0,69,855	0/0:24,0:24:72.23:0,72,893	0/0:22,0:22:60.14:0,60,706	0/0:24,0:24:69.20:0,69,843	1/1:2,29:31:87.29:1253,87,0	1/1:2,34:36:93.31:1339,93,0	0/0:15,0:15:45.14:0,45,558	0/0:29,0:29:84.25:0,84,1029	0/0:20,0:20:57.16:0,57,693	0/0:16,0:16:48.15:0,48,595	1/1:1,23:24:66.09:949,66,0	1/1:3,25:28:69.22:994,69,0	0/0:30,0:30:90.27:0,90,1102	0/0:21,0:21:63.20:0,63,781	0/0:21,0:21:63.20:0,63,781	0/0:20,0:20:60.19:0,60,743
chr10	69815858	.	GAAA	G	2971.74	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.268;DP=672;FS=6.568;HRun=9;HaplotypeScore=109.0744;InbreedingCoeff=0.9979;MQ=77.85;MQ0=0;MQRankSum=-4.115;QD=34.16;ReadPosRankSum=2.585;VQSLOD=2.7705;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.30:0,87,1806	1/1:1,11:12:33.10:468,33,0	0/0:19,0:21:26.71:0,27,878	0/0:16,0:14:33.11:0,33,624	0/0:25,0:25:69.24:0,69,1404	0/0:20,0:20:57.20:0,57,1211	0/0:12,0:12:36.12:0,36,762	0/0:46,0:46:99:0,135,2838	0/0:23,0:23:69.24:0,69,1440	0/0:28,0:28:84.28:0,84,1746	0/0:31,0:31:81.28:0,81,1678	0/0:24,0:24:60.20:0,60,1236	0/0:27,0:27:81.28:0,81,1682	0/0:28,0:28:84.26:0,84,1690	0/0:26,0:26:75.24:0,75,1504	0/0:26,0:26:72.25:0,72,1486	1/1:2,23:25:69.22:976,69,0	1/1:2,14:16:42.12:596,42,0	0/0:26,0:26:69.23:0,69,1409	0/0:26,0:26:63.22:0,63,1336	0/0:18,0:18:48.14:0,48,938	0/0:28,0:29:75.26:0,75,1569	1/1:1,21:22:60.19:851,60,0	1/1:4,8:12:18.49:256,18,0	0/0:20,0:20:60.21:0,60,1275	0/0:31,0:31:87.30:0,87,1842	0/0:29,0:30:87.28:0,87,1767	0/0:21,0:21:54.19:0,54,1140
chr10	69816400	.	CGAA	C	284.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.954;DP=751;FS=13.119;HRun=0;HaplotypeScore=118.5037;InbreedingCoeff=0.9954;MQ=58.32;MQ0=3;MQRankSum=-3.040;QD=12.93;ReadPosRankSum=-2.941;VQSLOD=1.6377;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:75.22:0,75,1556	0/0:12,0:11:33.06:0,33,640	0/0:22,0:18:23.86:0,24,719	0/0:23,0:17:30.10:0,30,628	0/0:22,0:22:60.21:0,60,1294	0/0:34,0:34:99:0,99,2082	0/0:27,0:27:77.94:0,78,1633	1/1:3,19:15:26.83:378,27,0	0/0:25,0:25:66.22:0,66,1403	0/0:38,0:38:99:0,102,2130	0/0:15,0:15:36.12:0,36,746	0/0:35,0:35:99:0,99,2090	0/0:35,0:35:99:0,99,2029	0/0:36,0:36:96.33:0,96,2050	0/0:43,0:43:99:0,120,2515	0/0:26,0:26:75.26:0,75,1612	0/0:18,0:18:44.76:0,45,937	0/0:15,0:15:30.10:0,30,644	0/0:23,0:23:56.86:0,57,1196	0/0:37,0:37:99:0,102,2054	0/0:26,0:26:78.19:0,78,1612	0/0:24,0:24:72.21:0,72,1428	0/0:18,0:18:48.03:0,48,935	0/0:18,0:18:42.14:0,42,896	0/0:26,0:26:69.24:0,69,1488	0/0:32,0:32:78.27:0,78,1704	0/0:39,0:39:99:0,117,2513	0/0:30,0:30:87.29:0,87,1862
chr10	69816505	.	T	TC	2488.19	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.194;DP=640;FS=1.705;HRun=0;HaplotypeScore=79.9497;InbreedingCoeff=0.9946;MQ=56.66;MQ0=1;MQRankSum=-11.485;QD=31.50;ReadPosRankSum=-2.404;VQSLOD=2.7587;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:32:73.12:0,73,1191	1/1:1,6:7:18.06:284,18,0	0/0:20,0:15:42.14:0,42,577	0/0:15,1:10:27.08:0,27,361	0/0:32,0:32:90.30:0,90,1256	0/0:23,0:23:69.23:0,69,965	0/0:18,0:18:54.18:0,54,755	1/1:4,18:20:45.15:709,45,0	0/0:19,0:19:57.19:0,57,797	0/0:27,0:27:78.26:0,78,1091	0/0:24,0:24:69.23:0,69,960	0/0:26,0:26:78.26:0,78,1091	0/0:30,0:30:90.29:0,90,1241	0/0:24,0:24:69.23:0,69,965	0/0:34,0:34:99:0,102,1426	0/0:25,0:25:75.25:0,75,1048	1/1:1,10:10:26.83:394,27,0	1/1:0,11:11:18.06:287,18,0	0/0:21,0:21:60.18:0,60,821	0/0:35,0:35:99:0,105,1417	0/0:21,0:21:63.21:0,63,881	0/0:22,0:22:66.22:0,66,923	1/1:1,17:18:45.15:715,45,0	1/1:0,10:10:17.93:286,18,0	0/0:22,0:22:66.22:0,66,923	0/0:32,0:32:96.30:0,96,1311	0/0:40,0:40:99:0,120,1624	0/0:18,0:18:54.18:0,54,753
chr10	69816563	.	TC	T	2393.22	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.744;DP=686;FS=5.808;HRun=1;HaplotypeScore=92.1887;InbreedingCoeff=0.9957;MQ=64.11;MQ0=1;MQRankSum=-12.082;QD=27.51;ReadPosRankSum=-0.331;VQSLOD=3.1175;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.31:0,90,1435	1/1:0,9:9:26.82:309,27,0	0/0:31,0:28:62.61:0,63,1152	0/0:24,0:21:54.09:0,54,793	0/0:27,0:27:81.25:0,81,1243	0/0:19,0:19:57.16:0,57,861	0/0:18,0:18:54.17:0,54,838	1/1:0,29:27:78.25:966,78,0	0/0:23,0:23:69.24:0,69,1098	0/0:36,0:36:99:0,108,1722	0/0:25,0:25:75.24:0,75,1158	0/0:23,0:23:69.22:0,69,1076	0/0:33,0:33:99:0,99,1573	0/0:18,0:18:51.17:0,51,815	0/0:37,0:37:99:0,111,1752	0/0:24,0:24:72.23:0,72,1128	1/1:0,16:15:33.08:393,33,0	1/1:0,9:9:21.05:245,21,0	0/0:25,0:25:72.24:0,72,1127	0/0:47,0:47:99:0,141,2243	0/0:19,0:19:57.19:0,57,911	0/0:28,0:28:84.27:0,84,1316	1/1:0,14:14:39.12:482,39,0	1/1:0,10:10:15.05:185,15,0	0/0:22,0:22:66.22:0,66,1042	0/0:30,0:30:90.30:0,90,1417	0/0:42,0:42:99:0,126,2014	0/0:14,0:14:42.14:0,42,671
chr10	69816632	.	TA	T	594.19	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.683;DP=610;FS=0.000;HRun=2;HaplotypeScore=69.0338;InbreedingCoeff=0.9803;MQ=74.16;MQ0=0;MQRankSum=-4.538;QD=23.77;ReadPosRankSum=-3.148;VQSLOD=2.5554;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1439	0/0:8,0:8:21.07:0,21,314	0/0:33,0:30:76.65:0,77,1034	0/0:22,0:21:49.87:0,50,665	0/0:21,0:21:63.08:0,63,911	0/0:18,0:18:54.18:0,54,809	0/0:20,0:20:60.18:0,60,860	1/1:1,24:25:57.11:689,57,0	0/0:23,0:23:69.22:0,69,1012	0/0:22,0:22:63.11:0,63,864	0/0:16,0:16:48.15:0,48,697	0/0:25,0:25:75.25:0,75,1124	0/0:30,0:30:87.27:0,87,1261	0/0:5,0:5:15.05:0,15,225	0/0:25,0:25:75.22:0,75,1083	0/0:25,0:25:75.25:0,75,1123	0/0:31,0:30:75.25:0,75,1097	0/0:25,0:25:63.21:0,63,934	0/0:14,0:14:42.13:0,42,594	0/0:31,0:31:90.29:0,90,1310	0/0:33,0:33:99:0,99,1462	0/0:19,0:19:57.18:0,57,834	0/0:21,0:21:63.17:0,63,898	0/0:19,0:19:45.10:0,45,627	0/0:18,0:18:54.17:0,54,790	0/0:14,0:14:42.13:0,42,609	0/0:22,0:22:66.21:0,66,966	0/0:11,0:11:33.02:0,33,407
chr10	69816829	.	ATTG	A	2080.01	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=10.808;DP=589;FS=34.808;HRun=0;HaplotypeScore=98.0182;InbreedingCoeff=0.9535;MQ=75.72;MQ0=2;MQRankSum=-9.638;QD=28.89;ReadPosRankSum=1.075;VQSLOD=1.9444;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,156,3342	1/1:1,1:2:3.01:49,3,0	0/0:23,0:23:63.18:0,63,1271	0/0:21,0:21:61.06:0,61,1213	0/0:22,0:22:66.23:0,66,1471	0/0:16,0:16:48.16:0,48,1069	0/0:31,0:31:90.31:0,90,1992	./.	0/0:17,0:17:48.15:0,48,1011	0/0:31,0:31:90.30:0,90,1922	0/0:12,0:12:36.12:0,36,801	0/0:26,0:26:78.27:0,78,1742	0/0:22,0:22:63.22:0,63,1388	0/0:22,0:22:60.21:0,60,1336	0/0:21,0:21:63.20:0,63,1324	0/0:28,0:28:81.28:0,81,1793	1/1:3,23:27:57.19:928,57,0	1/1:2,17:18:39.13:636,39,0	0/0:20,0:20:60.20:0,60,1298	0/0:27,0:27:78.27:0,78,1724	0/0:27,0:27:75.26:0,75,1640	0/0:24,0:24:72.25:0,72,1588	1/1:2,6:8:15.05:241,15,0	1/1:1,15:16:24.08:391,24,0	0/0:14,0:14:36.12:0,36,804	0/0:19,0:19:51.17:0,51,1079	0/0:15,0:15:42.14:0,42,935	0/0:14,0:14:39.12:0,39,828
chr10	69816951	.	TA	T	4124.33	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=15.354;DP=661;FS=1.254;HRun=2;HaplotypeScore=88.5007;InbreedingCoeff=0.9999;MQ=72.37;MQ0=1;MQRankSum=-2.898;QD=34.95;ReadPosRankSum=2.871;VQSLOD=4.0522;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1797	1/1:0,12:12:30.10:390,30,0	0/0:19,0:19:54.17:0,54,775	0/0:17,0:17:45.62:0,46,675	0/0:30,0:30:87.28:0,87,1281	0/0:21,0:21:63.17:0,63,901	0/0:25,0:25:75.25:0,75,1124	0/0:34,0:22:66.21:0,66,954	0/0:16,0:16:48.16:0,48,719	0/0:27,0:27:78.26:0,78,1151	0/0:16,0:16:45.15:0,45,675	0/0:23,0:23:69.23:0,69,1016	0/0:22,0:22:66.17:0,66,926	0/0:24,0:24:72.22:0,72,1036	0/0:27,0:27:81.26:0,81,1194	0/0:33,0:33:99:0,99,1464	1/1:1,22:23:63.20:817,63,0	1/1:0,29:29:78.25:1010,78,0	0/0:21,0:21:63.19:0,63,922	0/0:26,0:26:78.26:0,78,1167	0/0:30,0:30:87.25:0,87,1270	0/0:15,0:15:42.14:0,42,630	1/1:0,28:28:75.24:974,75,0	1/1:0,26:26:72.23:934,72,0	0/0:15,0:15:45.15:0,45,675	0/0:32,0:32:96.31:0,96,1403	0/0:16,0:16:48.13:0,48,677	0/0:14,0:14:42.14:0,42,628
chr10	69817318	.	CG	C	873.87	PASS	AB=0.943;AC=30;AF=0.556;AN=54;BaseQRankSum=0.954;DP=403;FS=36.747;HRun=14;HaplotypeScore=89.8309;InbreedingCoeff=0.4514;MQ=82.78;MQ0=2;MQRankSum=-3.582;QD=3.67;ReadPosRankSum=6.133;VQSLOD=-0.4681;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:23:0.54:1,1,0	1/1:6,11:17:29.72:205,30,0	0/1:27,1:22:27.96:28,0,48	0/0:22,1:19:12.20:0,12,73	1/1:11,0:12:2.01:6,2,0	0/0:14,0:14:5.99:0,6,48	0/1:18,1:19:11.62:12,0,35	1/1:12,0:16:6.15:17,6,0	0/0:23,0:23:5.64:0,6,42	1/1:14,1:15:2.92:20,3,0	0/0:7,0:7:0:0,0,0	0/0:18,0:18:8.84:0,9,59	1/1:11,0:11:2.88:20,3,0	0/0:15,0:15:11.83:0,12,78	0/0:14,1:15:0.47:0,0,1	0/0:10,0:10:8.72:0,9,50	1/1:7,12:19:32.57:226,33,0	1/1:6,11:17:31.95:225,32,0	1/1:6,0:6:2.59:17,3,0	1/1:8,1:10:4.75:26,5,0	./.	1/1:10,0:10:2.86:17,3,0	1/1:6,8:14:20.72:144,21,0	1/1:3,6:9:8.83:62,9,0	0/0:12,0:12:2.99:0,3,24	0/0:9,0:9:0:0,0,0	0/0:12,2:14:2.99:0,3,24	1/1:10,0:11:1.68:5,2,0
chr10	69818102	.	T	TCTC	10776.94	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=2.865;DP=862;FS=12.941;HRun=0;HaplotypeScore=122.7928;InbreedingCoeff=1.0000;MQ=91.34;MQ0=0;MQRankSum=-7.148;QD=58.25;ReadPosRankSum=1.366;VQSLOD=6.1782;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1970	1/1:1,18:19:57.20:1308,57,0	0/0:37,0:37:93.27:0,93,1494	0/0:34,0:34:96.27:0,96,1516	0/0:37,0:37:99:0,105,1706	0/0:18,0:18:54.12:0,54,883	0/0:23,0:23:63.20:0,63,1047	1/1:5,31:38:99:2339,111,0	0/0:32,0:32:90.28:0,90,1479	0/0:39,0:39:99:0,108,1702	0/0:17,0:17:48.16:0,48,814	0/0:40,0:40:99:0,111,1836	0/0:35,0:35:99:0,102,1681	0/0:38,0:38:99:0,108,1758	0/0:49,0:49:99:0,141,2322	0/0:35,0:35:96.32:0,96,1612	1/1:5,34:39:90.05:2060,90,0	1/1:1,24:25:69.24:1590,69,0	0/0:17,0:17:48.16:0,48,818	0/0:24,0:24:72.23:0,72,1188	0/0:33,0:33:93.26:0,93,1505	0/0:32,0:32:90.31:0,90,1535	1/1:1,28:29:78.27:1765,78,0	1/1:2,32:35:75.26:1715,75,0	0/0:34,0:34:99:0,99,1659	0/0:28,0:28:81.25:0,81,1329	0/0:16,0:16:48.15:0,48,789	0/0:19,0:19:57.19:0,57,950
chr10	69818152	.	AAG	A	1187.99	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.830;DP=803;FS=0.686;HRun=0;HaplotypeScore=108.4990;InbreedingCoeff=0.9999;MQ=84.47;MQ0=0;MQRankSum=-2.665;QD=40.97;ReadPosRankSum=-3.695;VQSLOD=3.9626;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,2188	0/0:12,0:12:36.12:0,36,674	0/0:20,0:20:53.47:0,53,964	0/0:31,0:31:61.98:0,62,1374	0/0:36,0:36:99:0,108,2018	0/0:19,0:19:57.18:0,57,1067	0/0:29,0:29:87.30:0,87,1679	1/1:0,29:29:87.26:1283,87,0	0/0:33,0:33:96.33:0,96,1827	0/0:39,0:39:99:0,114,2141	0/0:20,0:20:60.21:0,60,1145	0/0:46,0:46:99:0,138,2652	0/0:34,0:34:99:0,102,1935	0/0:25,0:25:75.26:0,75,1437	0/0:44,0:44:99:0,126,2422	0/0:30,0:30:90.31:0,90,1726	0/0:39,0:39:99:0,108,2080	0/0:28,0:28:81.28:0,81,1523	0/0:19,0:19:54.18:0,54,1044	0/0:23,0:23:66.23:0,66,1259	0/0:22,0:22:63.22:0,63,1204	0/0:25,0:25:72.25:0,72,1390	0/0:23,0:23:69.24:0,69,1319	0/0:32,0:32:78.27:0,78,1505	0/0:36,0:36:99:0,108,2085	0/0:33,0:33:99:0,99,1864	0/0:23,0:22:69.24:0,69,1317	0/0:15,0:15:45.15:0,45,869
chr10	69818342	.	T	TA	3612.19	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.379;DP=684;FS=0.877;HRun=3;HaplotypeScore=77.7882;InbreedingCoeff=0.9961;MQ=84.72;MQ0=0;MQRankSum=-2.943;QD=36.12;ReadPosRankSum=2.443;VQSLOD=4.2903;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,1511	1/1:0,6:6:15.05:210,15,0	0/0:24,0:24:60.11:0,60,684	0/0:17,0:17:33.84:0,34,375	0/0:13,0:13:36.11:0,36,432	0/0:22,0:22:63.19:0,63,756	0/0:24,0:24:66.20:0,66,791	0/0:36,0:36:99:0,102,1205	0/0:24,0:24:69.18:0,69,811	0/0:30,0:30:84.24:0,84,990	0/0:14,0:14:39.11:0,39,456	0/0:42,0:42:99:0,123,1476	0/0:22,0:22:63.19:0,63,756	0/0:22,0:22:66.18:0,66,778	0/0:36,0:36:99:0,105,1249	0/0:29,0:29:84.26:0,84,1008	1/1:1,26:27:75.25:1050,75,0	1/1:2,26:28:69.23:966,69,0	0/0:19,0:19:48.14:0,48,566	0/0:19,0:19:54.16:0,54,646	0/0:33,0:33:99:0,99,1188	0/0:26,0:26:75.21:0,75,878	1/1:2,20:22:57.19:798,57,0	1/1:2,15:17:42.14:588,42,0	0/0:21,0:21:60.15:0,60,695	0/0:30,0:30:84.26:0,84,1008	0/0:27,0:27:78.23:0,78,923	0/0:11,0:11:33.10:0,33,396
chr10	69818493	.	A	ATAG	5862.46	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.005;DP=723;FS=17.824;HRun=0;HaplotypeScore=107.0451;InbreedingCoeff=0.9991;MQ=81.86;MQ0=0;MQRankSum=-1.582;QD=51.43;ReadPosRankSum=2.449;VQSLOD=6.0078;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,178,2855	1/1:0,8:8:24.08:542,24,0	0/0:20,0:20:30.23:0,30,742	0/0:20,0:20:48.55:0,49,718	0/0:20,0:20:54.17:0,54,874	0/0:25,0:25:75.26:0,75,1247	0/0:29,0:29:84.29:0,84,1397	0/0:34,0:34:81.28:0,81,1346	0/0:25,0:25:69.24:0,69,1149	0/0:34,0:34:93.30:0,93,1482	0/0:11,0:11:30.09:0,30,474	0/0:31,0:31:90.28:0,90,1428	0/0:23,0:23:66.23:0,66,1095	0/0:27,0:27:78.25:0,78,1270	0/0:28,0:28:81.28:0,81,1349	0/0:18,0:18:51.17:0,51,826	1/1:2,21:22:48.16:1087,48,0	1/1:5,27:33:84.29:1863,84,0	0/0:19,0:19:51.14:0,51,776	0/0:21,0:21:60.18:0,60,950	0/0:50,0:50:99:0,132,2163	0/0:22,0:22:63.20:0,63,1021	1/1:5,11:16:36.11:739,36,0	1/1:3,30:34:72.01:1631,72,0	0/0:23,0:23:60.18:0,60,952	0/0:26,0:26:72.22:0,72,1151	0/0:29,0:29:84.25:0,84,1325	0/0:13,0:13:30.10:0,30,492
chr10	69818649	.	G	GA	702.06	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.943;DP=679;FS=0.852;HRun=1;HaplotypeScore=106.6906;InbreedingCoeff=0.9931;MQ=88.92;MQ0=0;MQRankSum=-4.979;QD=33.43;ReadPosRankSum=-3.119;VQSLOD=2.6250;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,150,1785	0/0:8,0:8:24.08:0,24,311	0/0:23,0:23:60.05:0,60,679	0/0:27,0:27:75:0,75,827	0/0:10,0:10:30.10:0,30,388	0/0:24,0:24:69.22:0,69,894	0/0:38,0:38:99:0,114,1393	1/1:3,18:21:60.09:797,60,0	0/0:16,0:16:48.15:0,48,616	0/0:25,0:25:73.78:0,74,891	0/0:12,0:12:33.11:0,33,426	0/0:27,0:27:75.23:0,75,955	0/0:27,0:27:78.22:0,78,981	0/0:27,0:27:81.23:0,81,1004	0/0:20,0:20:54.18:0,54,700	0/0:13,0:13:39.12:0,39,492	0/0:35,0:35:99:0,105,1241	0/0:23,0:23:66.21:0,66,850	0/0:21,0:21:63.14:0,63,785	0/0:14,0:14:42.14:0,42,542	0/0:60,0:60:99:0,174,2195	0/0:24,0:24:66.19:0,66,827	0/0:18,0:18:48.16:0,48,622	0/0:29,0:29:81.18:0,81,1012	0/0:26,0:26:75.24:0,75,972	0/0:29,0:29:84.27:0,84,1090	0/0:22,0:22:66.21:0,66,854	0/0:8,0:8:21.07:0,21,272
chr10	69819028	.	TCA	T	1120.78	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.339;DP=815;FS=1.539;HRun=0;HaplotypeScore=116.7477;InbreedingCoeff=0.9996;MQ=91.96;MQ0=0;MQRankSum=-5.875;QD=37.36;ReadPosRankSum=-2.710;VQSLOD=4.8107;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,163,3009	0/0:12,0:12:36.12:0,36,653	0/0:31,0:31:83.95:0,84,1487	0/0:36,0:36:99:0,102,1794	0/0:23,0:23:69.24:0,69,1277	0/0:22,0:22:63.22:0,63,1163	0/0:22,0:22:66.23:0,66,1236	1/1:2,28:30:84.27:1216,84,0	0/0:23,0:23:69.24:0,69,1293	0/0:26,0:26:72.25:0,72,1341	0/0:12,0:12:33.11:0,33,610	0/0:43,0:43:99:0,129,2404	0/0:36,0:36:99:0,105,1901	0/0:38,0:38:99:0,111,2078	0/0:42,0:42:99:0,126,2360	0/0:47,0:47:99:0,138,2585	0/0:23,0:23:69.24:0,69,1292	0/0:28,0:28:75.23:0,75,1371	0/0:29,0:29:66.23:0,66,1228	0/0:21,0:21:63.20:0,63,1138	0/0:51,0:51:99:0,154,2831	0/0:19,0:19:54.19:0,54,1003	0/0:16,0:16:48.16:0,48,898	0/0:32,0:32:93.32:0,93,1732	0/0:20,0:20:57.20:0,57,1068	0/0:27,0:27:75.26:0,75,1394	0/0:34,0:34:99:0,99,1777	0/0:17,0:17:51.17:0,51,954
chr10	69820675	.	CCT	C	4691.10	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.210;DP=671;FS=4.019;HRun=0;HaplotypeScore=122.2517;InbreedingCoeff=0.9964;MQ=75.00;MQ0=0;MQRankSum=-3.942;QD=33.27;ReadPosRankSum=2.107;VQSLOD=7.2491;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,2662	1/1:0,5:5:15.05:227,15,0	0/0:18,0:18:48.15:0,48,786	0/0:24,0:23:57.82:0,58,964	0/0:19,0:19:54.17:0,54,967	0/0:19,0:19:56.99:0,57,927	0/0:33,0:33:96.33:0,96,1766	1/1:5,15:19:36.02:476,36,0	0/0:23,0:23:69.22:0,69,1249	0/0:25,0:25:75.25:0,75,1361	0/0:12,0:12:33.11:0,33,615	0/0:23,0:23:69.22:0,69,1248	0/0:15,0:15:45.15:0,45,839	0/0:28,0:28:84.25:0,84,1465	0/0:34,0:34:99:0,102,1870	0/0:27,0:27:81.28:0,81,1508	1/1:1,44:45:99:1581,105,0	1/1:1,15:16:36.12:541,36,0	0/0:24,0:24:72.25:0,72,1316	0/0:18,0:18:54.19:0,54,989	0/0:41,0:41:99:0,120,2175	0/0:25,0:25:72.19:0,72,1220	1/1:0,18:18:36.04:486,36,0	1/1:1,36:37:92.93:1380,93,0	0/0:14,0:14:42.11:0,42,748	0/0:28,0:28:81.25:0,81,1427	0/0:21,0:20:63.20:0,63,1120	0/0:9,0:9:27.09:0,27,503
chr10	69821541	.	A	AT	6208.54	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-6.131;DP=369;FS=3.042;HRun=7;HaplotypeScore=41.6058;InbreedingCoeff=0.9736;MQ=74.05;MQ0=0;MQRankSum=-0.874;QD=30.89;ReadPosRankSum=-0.566;VQSLOD=4.7630;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:75.23:906,75,0	1/1:0,4:4:12.04:145,12,0	0/0:6,0:6:9.01:0,9,85	0/0:10,0:10:18.02:0,18,170	1/1:0,9:9:27.08:326,27,0	0/0:23,0:23:57.09:0,57,550	0/0:7,0:7:18.02:0,18,174	1/1:6,25:31:75.21:893,75,0	0/0:12,0:12:33.05:0,33,319	0/0:14,0:14:33.05:0,33,319	0/0:15,0:15:39.06:0,39,377	0/0:14,0:14:39.06:0,39,377	0/0:14,0:14:39.05:0,39,370	0/0:11,0:11:33.05:0,33,319	0/0:16,0:16:45.07:0,45,435	0/0:13,0:13:39.06:0,39,376	1/1:2,8:10:24.07:290,24,0	1/1:2,8:10:21.06:251,21,0	1/1:3,16:19:48.15:580,48,0	1/1:1,10:11:30.01:330,30,0	1/1:0,5:5:15.05:181,15,0	0/0:3,0:3:9.01:0,9,87	1/1:0,10:10:27.08:326,27,0	1/1:0,9:9:27.08:326,27,0	0/0:10,0:9:27.03:0,27,256	1/1:1,19:20:57.16:676,57,0	1/1:4,18:22:57.17:688,57,0	1/1:3,11:14:24.07:290,24,0
chr10	69821756	.	ATATATATATG	A	350.46	PASS	AB=1.000;AC=5;AF=0.093;AN=54;BaseQRankSum=3.039;DP=260;FS=0.000;HRun=0;HaplotypeScore=83.7026;InbreedingCoeff=0.6091;MQ=79.23;MQ0=1;MQRankSum=-4.045;QD=21.90;ReadPosRankSum=0.606;VQSLOD=1.6781;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:33.09:0,33,1220	0/0:2,0:2:2.96:0,3,19	0/0:13,0:8:0:0,0,0	0/0:22,0:15:12.50:0,13,92	0/0:7,0:7:15.05:0,15,689	0/0:15,0:15:42.14:0,42,1801	0/0:3,0:3:6.02:0,6,228	0/0:38,0:38:90.08:0,90,2884	0/0:4,0:4:12.04:0,12,620	0/0:5,0:5:15.05:0,15,705	0/0:5,0:5:12.04:0,12,553	0/0:10,0:10:27.09:0,27,1294	0/0:6,0:6:15.05:0,15,651	0/0:4,0:4:9.03:0,9,366	0/0:5,0:5:9.03:0,9,348	0/0:9,0:9:21.07:0,21,918	1/1:4,8:12:15.05:416,15,0	./.	0/0:19,0:19:48.16:0,48,2119	0/0:7,0:7:12.03:0,12,378	0/0:9,0:9:15.05:0,15,703	0/0:2,0:2:6.02:0,6,204	1/1:0,1:1:3.01:37,3,0	0/1:3,0:3:0:0,0,0	0/0:6,0:6:18.06:0,18,771	0/0:10,0:10:30.10:0,30,1485	0/0:8,0:8:18.06:0,18,660	0/0:19,0:19:57.20:0,57,2763
chr10	69821810	.	AG	A	1428.26	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.880;DP=329;FS=31.706;HRun=3;HaplotypeScore=42.4365;InbreedingCoeff=0.8249;MQ=85.24;MQ0=0;MQRankSum=-2.081;QD=34.01;ReadPosRankSum=-3.030;VQSLOD=0.7777;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:21.07:0,21,302	0/0:6,0:6:18.06:0,18,259	0/0:14,0:15:39.13:0,39,559	0/0:8,0:8:18.53:0,19,259	0/0:16,0:16:48.16:0,48,691	0/0:21,0:21:63.20:0,63,889	0/0:6,0:6:18.06:0,18,259	1/1:1,41:42:99:1523,123,0	0/0:10,0:10:30.10:0,30,432	0/0:13,0:13:36.12:0,36,518	0/0:14,0:14:39.13:0,39,562	0/0:8,0:8:24.07:0,24,329	0/0:13,0:13:39.13:0,39,559	0/0:11,0:11:33.10:0,33,457	0/0:9,0:9:27.09:0,27,386	0/0:11,0:11:33.11:0,33,474	0/0:10,0:10:24.08:0,24,345	0/0:6,0:6:18.06:0,18,259	0/0:20,0:20:60.20:0,60,864	0/0:10,0:10:30.10:0,30,432	0/0:3,0:3:9.03:0,9,128	0/0:9,0:9:27.09:0,27,387	0/0:7,0:7:21.07:0,21,300	0/0:3,0:3:6.02:0,6,86	0/0:14,0:14:42.14:0,42,605	0/0:12,0:12:36.11:0,36,501	0/0:11,0:11:33.11:0,33,475	0/0:14,0:14:42.14:0,42,604
chr10	69821919	.	T	TAA	4960.26	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.213;DP=475;FS=35.034;HRun=3;HaplotypeScore=59.9868;InbreedingCoeff=0.9969;MQ=74.74;MQ0=0;MQRankSum=-6.557;QD=50.10;ReadPosRankSum=-1.697;VQSLOD=2.3427;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:30.10:0,30,459	1/1:1,11:12:33.11:637,33,0	0/0:11,0:11:27.08:0,27,385	0/0:8,0:8:24.08:0,24,358	0/0:19,0:19:57.19:0,57,868	0/0:22,0:22:60.19:0,60,898	0/0:22,0:22:60.20:0,60,918	1/1:5,35:40:99:2082,111,0	0/0:21,0:21:63.21:0,63,964	0/0:13,0:13:39.13:0,39,579	0/0:20,0:20:60.20:0,60,917	0/0:20,0:20:60.19:0,60,897	0/0:27,0:27:75.25:0,75,1143	0/0:21,0:21:63.20:0,63,943	0/0:20,0:20:54.18:0,54,825	0/0:21,0:21:57.18:0,57,852	1/1:0,11:11:33.11:637,33,0	1/1:1,12:13:27.09:518,27,0	0/0:10,0:10:27.07:0,27,392	0/0:11,0:11:33.11:0,33,505	0/0:14,0:14:39.13:0,39,597	0/0:11,0:11:33.11:0,33,504	1/1:2,14:16:34.36:739,34,0	1/1:0,7:7:18.06:347,18,0	0/0:14,0:14:42.14:0,42,639	0/0:26,0:26:75.19:0,75,1081	0/0:18,0:18:48.16:0,48,731	0/0:15,0:15:45.15:0,45,689
chr10	69823131	.	T	TAAG	4632.46	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.606;DP=483;FS=2.186;HRun=0;HaplotypeScore=80.5091;InbreedingCoeff=0.9768;MQ=77.14;MQ0=0;MQRankSum=-12.826;QD=55.15;ReadPosRankSum=-2.032;VQSLOD=6.4099;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:45.14:0,45,726	1/1:1,11:12:36.12:823,36,0	0/0:11,0:11:30.10:0,30,506	0/0:12,0:12:23.88:0,24,332	0/0:31,0:31:90.29:0,90,1508	0/0:16,0:16:48.15:0,48,789	0/0:23,0:23:66.19:0,66,1043	1/1:11,10:22:57.11:1144,57,0	0/0:12,0:12:33.11:0,33,563	0/0:20,0:20:51.17:0,51,869	0/0:22,0:22:63.22:0,63,1075	0/0:18,0:18:54.18:0,54,919	0/0:20,0:20:57.18:0,57,945	0/0:14,0:15:43.70:0,44,718	0/0:18,0:18:42.13:0,42,687	0/0:11,0:11:33.10:0,33,537	1/1:2,10:13:33.11:744,33,0	1/1:3,7:10:21.07:479,21,0	0/0:12,0:12:36.12:0,36,614	0/0:23,0:23:63.20:0,63,1046	0/0:10,0:10:30.10:0,30,512	0/0:17,0:17:51.17:0,51,870	1/1:4,19:24:60.21:1337,60,0	1/1:0,3:3:6.02:106,6,0	0/0:27,0:27:78.25:0,78,1299	0/0:21,0:21:63.22:0,63,1073	0/0:32,0:32:96.33:0,96,1638	0/0:13,0:13:36.12:0,36,614
chr10	69824633	.	AC	A	4333.51	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.900;DP=738;FS=5.482;HRun=5;HaplotypeScore=85.8384;InbreedingCoeff=0.9995;MQ=94.66;MQ0=0;MQRankSum=-2.047;QD=29.08;ReadPosRankSum=0.668;VQSLOD=5.1375;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:86.34:0,86,1185	1/1:1,8:9:24.07:272,24,0	0/0:35,0:35:87.12:0,87,1079	0/0:32,0:32:83.99:0,84,1048	0/0:23,0:22:63.18:0,63,827	0/0:20,0:20:54.17:0,54,723	0/0:23,0:23:66.18:0,66,854	1/1:5,32:37:99:1068,99,0	0/0:26,0:26:78.25:0,78,1051	0/0:34,0:34:99:0,99,1326	0/0:15,0:15:45.13:0,45,583	0/0:35,0:35:99:0,99,1354	0/0:28,0:28:78.22:0,78,1032	0/0:25,0:25:75.23:0,75,996	0/0:34,0:34:96.28:0,96,1266	0/0:45,0:45:99:0,135,1811	1/1:0,29:29:66.19:749,66,0	1/1:0,31:31:78.22:883,78,0	0/0:25,0:25:63.06:0,63,818	0/0:12,0:12:36.10:0,36,461	0/0:36,0:36:99:0,102,1327	0/0:19,0:19:57.19:0,57,778	1/1:0,21:21:60.17:681,60,0	1/1:1,21:22:60.17:681,60,0	0/0:19,0:19:51.17:0,51,698	0/0:31,0:31:90.27:0,90,1199	0/0:25,0:25:72.15:0,72,920	0/0:14,0:14:42.14:0,42,574
chr10	69824701	.	GC	G	69.81	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.168;DP=619;FS=0.000;HRun=2;HaplotypeScore=80.5695;InbreedingCoeff=0.9567;MQ=80.98;MQ0=1;MQRankSum=-1.099;QD=17.45;ReadPosRankSum=-0.026;VQSLOD=3.4412;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1750	1/1:0,4:4:12.04:156,12,0	0/0:12,0:10:24.68:0,25,326	0/0:23,0:23:60.13:0,60,813	0/0:15,0:15:45.12:0,45,634	0/0:19,0:19:57.19:0,57,853	0/0:28,0:28:84.28:0,84,1256	0/0:27,0:27:75.24:0,75,1088	0/0:22,0:22:66.21:0,66,965	0/0:17,0:17:51.17:0,51,757	0/0:17,0:17:51.17:0,51,762	0/0:21,0:21:63.15:0,63,881	0/0:16,0:16:48.16:0,48,718	0/0:16,0:16:48.14:0,48,683	0/0:36,0:36:99:0,105,1571	0/0:33,0:33:99:0,99,1433	0/0:42,0:42:99:0,105,1547	0/0:28,0:28:66.21:0,66,967	0/0:24,0:24:60.20:0,60,898	0/0:7,0:7:18.05:0,18,251	0/0:39,0:39:99:0,117,1749	0/0:13,0:13:39.12:0,39,564	0/0:10,0:10:24.05:0,24,334	0/0:24,0:24:72.23:0,72,1058	0/0:12,0:12:36.12:0,36,538	0/0:30,0:30:90.29:0,90,1318	0/0:29,0:29:87.28:0,87,1278	0/0:15,0:15:45.15:0,45,671
chr10	69825321	.	C	CAA	4390.89	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-6.611;DP=596;FS=13.910;HRun=7;HaplotypeScore=71.0866;InbreedingCoeff=0.9982;MQ=81.38;MQ0=1;MQRankSum=0.403;QD=34.57;ReadPosRankSum=1.025;VQSLOD=3.4392;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:93.26:0,93,1082	1/1:1,7:8:18.06:295,18,0	0/0:20,0:20:42.96:0,43,479	0/0:16,0:16:33.09:0,33,378	0/0:24,0:24:57.15:0,57,664	0/0:32,0:32:96.27:0,96,1105	0/0:18,0:18:54.16:0,54,629	1/1:4,0:29:62.88:236,63,0	0/0:18,0:18:42.10:0,42,477	0/0:18,0:18:45.13:0,45,523	0/0:19,0:19:51.14:0,51,594	0/0:15,0:15:42.11:0,42,478	0/0:21,0:21:57.11:0,57,639	0/0:17,0:17:42.12:0,42,489	0/0:17,0:17:48.13:0,48,547	0/0:28,0:28:69.19:0,69,804	1/1:2,19:21:60.16:955,60,0	1/1:2,29:30:78.27:1280,78,0	0/0:22,0:22:63.17:0,63,722	0/0:21,0:21:48.11:0,48,559	0/0:20,0:20:54.16:0,54,629	0/0:22,0:22:57.15:0,57,664	1/1:2,16:18:45.15:738,45,0	1/1:3,17:19:54.18:886,54,0	0/0:17,0:17:48.14:0,48,559	0/0:26,0:26:72.21:0,72,839	0/0:26,0:25:66.16:0,66,757	0/0:12,0:12:33.08:0,33,372
chr10	69825397	.	G	GAAA	10381.41	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=0.797;DP=639;FS=1.491;HRun=10;HaplotypeScore=102.1241;InbreedingCoeff=0.8985;MQ=71.16;MQ0=1;MQRankSum=-1.722;QD=29.58;ReadPosRankSum=-4.767;VQSLOD=3.0343;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:33:45.55:780,46,0	1/1:6,0:6:5.98:49,6,0	0/1:13,0:14:2.90:3,0,105	0/0:11,0:10:1.26:0,1,99	1/1:9,23:33:56.88:894,57,0	0/0:34,0:34:83.84:0,84,1021	0/0:13,0:13:36.09:0,36,425	1/1:9,10:27:53.93:689,54,0	0/0:18,0:18:45.12:0,45,547	0/0:13,0:14:28.43:0,28,362	0/0:25,0:25:66.18:0,66,801	0/0:21,0:21:63.16:0,63,740	0/0:26,0:26:69.13:0,69,811	0/0:22,0:22:50.82:0,51,594	0/0:32,0:32:81.15:0,81,960	0/0:32,0:32:69.04:0,69,828	1/1:5,10:16:39.07:658,39,0	1/1:11,15:25:57.20:1094,57,0	1/1:17,9:27:63.15:1033,63,0	1/1:1,21:26:60.01:879,60,0	1/1:3,16:20:30.08:527,30,0	0/0:25,0:25:66.14:0,66,789	1/1:10,3:14:33.06:481,33,0	1/1:2,20:22:35.72:677,36,0	0/0:14,0:15:8.62:0,9,372	1/1:8,25:35:44.74:1295,45,0	1/1:6,23:32:54.05:899,54,0	1/1:4,14:18:24.07:425,24,0
chr10	69828064	.	TC	T	3174.01	PASS	AB=0.958;AC=18;AF=0.321;AN=56;BaseQRankSum=3.004;DP=438;FS=2.102;HRun=5;HaplotypeScore=87.9030;InbreedingCoeff=0.8525;MQ=69.14;MQ0=6;MQRankSum=0.812;QD=21.89;ReadPosRankSum=2.592;VQSLOD=2.7183;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:29:37.10:682,37,0	0/0:6,0:6:15.05:0,15,205	0/0:39,0:15:43.89:0,44,504	0/0:54,0:34:22.49:0,22,409	1/1:2,8:10:24.07:272,24,0	0/1:15,0:15:4.39:4,0,393	0/0:12,0:12:29.97:0,30,380	0/0:18,0:18:42.13:0,42,561	0/0:10,0:10:9.91:0,10,309	0/0:18,0:18:54.12:0,54,714	0/0:4,0:4:12.04:0,12,164	0/0:10,0:10:27.09:0,27,369	0/0:13,0:13:27.03:0,27,402	0/0:6,0:6:18.06:0,18,246	0/0:11,0:10:24.04:0,24,307	0/0:17,0:17:39.11:0,39,518	0/1:10,0:11:6.97:7,0,165	0/0:13,0:13:35.87:0,36,447	1/1:0,11:11:33.05:359,33,0	1/1:0,11:11:30.09:340,30,0	1/1:1,20:21:48.14:544,48,0	0/0:18,0:18:51.17:0,51,697	0/0:17,0:17:39.31:0,39,538	0/0:17,0:17:33.09:0,33,431	0/0:9,0:9:23.81:0,24,299	1/1:0,12:12:36.10:408,36,0	1/1:1,12:13:36.10:408,36,0	1/1:1,11:12:32.96:355,33,0
chr10	69828097	.	CCTT	C	1242.75	PASS	AB=0.702;AC=8;AF=0.143;AN=56;BaseQRankSum=0.873;DP=457;FS=0.623;HRun=0;HaplotypeScore=113.2947;InbreedingCoeff=0.4157;MQ=61.31;MQ0=20;MQRankSum=-1.157;QD=19.73;ReadPosRankSum=1.696;VQSLOD=3.4955;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:59.66:0,60,1052	1/1:1,6:6:17.98:244,18,0	0/0:65,0:14:26.16:0,26,408	0/0:73,0:19:13.78:0,14,364	0/0:11,0:11:28.77:0,29,481	0/1:12,0:12:1.60:2,0,535	0/0:13,0:13:35.64:0,36,667	0/0:22,0:19:50.96:0,51,1008	0/0:9,0:9:26.57:0,27,519	0/0:18,0:18:54.10:0,54,1007	0/0:8,0:8:21.83:0,22,302	0/0:4,0:3:9.03:0,9,207	0/0:12,0:10:27.04:0,27,558	0/0:6,0:6:0.02:0,0,275	0/0:14,0:13:39:0,39,715	0/0:12,0:12:33.11:0,33,759	0/1:4,5:8:31.39:91,0,31	0/1:3,10:13:8.08:474,0,8	0/0:10,0:10:24.04:0,24,502	0/0:13,0:13:37.36:0,37,775	0/0:19,0:19:36.49:0,36,729	0/0:20,0:20:57.07:0,57,1093	0/1:4,8:12:45.88:244,0,46	1/1:1,9:10:21.05:329,21,0	0/0:9,0:9:26.99:0,27,474	0/0:12,0:12:30.10:0,30,640	0/0:8,0:8:18.93:0,19,476	0/0:13,0:13:23.05:0,23,558
chr10	69828098	.	CT	C	33.08	PASS	AB=0.921;AC=8;AF=0.143;AN=56;BaseQRankSum=5.679;DP=458;FS=2.298;HRun=2;HaplotypeScore=109.5963;InbreedingCoeff=0.4026;MQ=61.25;MQ0=19;MQRankSum=-0.997;QD=0.55;ReadPosRankSum=3.605;VQSLOD=-0.6355;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:59.34:0,59,801	1/1:7,0:6:9.49:32,9,0	0/0:65,0:15:37.44:0,37,326	0/0:74,0:19:16.74:0,17,337	0/0:12,0:12:27.02:0,27,339	0/0:11,1:12:23.64:0,24,415	0/0:12,0:12:30.70:0,31,496	0/0:21,0:18:50.38:0,50,720	0/0:9,0:9:25.33:0,25,361	0/0:19,0:19:54.18:0,54,784	0/0:8,0:8:15.92:0,16,221	0/0:4,0:3:9.03:0,9,135	0/0:11,0:9:27.09:0,27,401	0/0:5,1:6:1.58:0,2,183	0/0:14,0:13:36.58:0,37,517	0/0:12,0:12:33.11:0,33,494	0/1:8,1:8:16.28:16,0,34	0/1:12,1:13:10.41:52,0,10	0/0:9,0:9:24.08:0,24,360	0/0:13,0:13:38.87:0,39,550	0/0:19,0:19:32.59:0,33,469	0/0:20,0:20:54.17:0,54,777	0/1:10,0:12:13.30:13,0,48	1/1:10,0:10:15.78:53,16,0	0/0:10,0:10:24.08:0,24,348	0/0:12,0:12:30.10:0,30,449	0/1:9,0:9:0.57:1,0,290	0/0:12,0:12:22.24:0,22,396
chr10	69828142	.	C	CCCT	1355.23	PASS	AB=0.883;AC=44;AF=0.917;AN=48;BaseQRankSum=-3.924;DP=167;FS=1.552;HRun=0;HaplotypeScore=56.4284;InbreedingCoeff=0.0377;MQ=52.67;MQ0=7;MQRankSum=0.000;QD=8.69;ReadPosRankSum=-1.271;VQSLOD=2.6283;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,1:4:3.01:56,3,0	./.	0/1:11,0:4:3.08:3,0,9	0/1:16,0:4:1.09:1,0,7	1/1:5,0:5:3:26,3,0	0/1:4,3:6:18.61:47,0,19	0/1:4,1:5:4.75:50,0,5	./.	1/1:7,0:6:8.95:84,9,0	1/1:12,0:12:10.54:139,11,0	1/1:7,0:7:14.78:122,15,0	1/1:5,0:4:1.17:3,1,0	1/1:6,0:5:1.63:90,2,0	1/1:4,1:5:8.23:66,8,0	1/1:5,0:5:8.72:54,9,0	1/1:3,2:4:12.02:158,12,0	1/1:4,0:3:2.60:10,3,0	1/1:3,1:4:5.94:41,6,0	1/1:1,1:2:3.01:66,3,0	1/1:8,1:9:8.94:70,9,0	1/1:13,0:13:8.41:77,8,0	1/1:7,0:6:8.89:83,9,0	./.	./.	1/1:3,0:3:2.84:14,3,0	1/1:10,0:9:4.69:82,5,0	1/1:2,0:2:6:58,6,0	1/1:0,1:1:3.01:56,3,0
chr10	69828334	.	TTCC	T	1209.42	PASS	AB=0.969;AC=14;AF=0.250;AN=56;BaseQRankSum=7.528;DP=525;FS=9.592;HRun=0;HaplotypeScore=132.3504;InbreedingCoeff=0.7963;MQ=66.35;MQ0=10;MQRankSum=-5.512;QD=11.20;ReadPosRankSum=0.480;VQSLOD=2.8665;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:82.91:0,83,1489	1/1:1,3:4:9.03:132,9,0	0/0:55,0:23:14.50:0,14,211	0/0:76,0:42:30.29:0,30,773	0/1:9,0:10:1.95:2,0,411	0/1:14,1:15:8.10:8,0,591	0/0:26,1:27:13.87:0,14,1018	1/1:15,8:22:18.05:239,18,0	0/0:15,0:15:39.12:0,39,766	0/0:21,0:21:60.12:0,60,1151	0/0:9,0:9:24.08:0,24,489	0/0:14,0:14:33.03:0,33,600	0/0:15,0:15:42.11:0,42,782	0/0:9,0:9:21.07:0,21,434	0/0:15,0:15:30.10:0,30,617	0/0:14,0:14:33.06:0,33,603	1/1:11,6:18:15.94:324,16,0	1/1:7,4:11:11.69:193,12,0	0/0:7,0:7:8.99:0,9,144	0/0:9,0:9:20.99:0,21,391	0/0:33,0:33:71.95:0,72,1411	0/0:17,0:17:42.14:0,42,850	1/1:2,6:8:11.77:176,12,0	1/1:10,9:19:21.07:315,21,0	0/0:9,0:9:21.07:0,21,435	0/0:20,0:20:46.36:0,46,908	0/0:16,0:16:42.14:0,42,870	0/0:3,0:3:9.03:0,9,187
chr10	69828365	.	T	TCTTC	3584.83	PASS	AB=0.538;AC=11;AF=0.196;AN=56;BaseQRankSum=4.319;DP=574;FS=0.554;HRun=0;HaplotypeScore=131.8886;InbreedingCoeff=0.8661;MQ=55.77;MQ0=5;MQRankSum=-8.673;QD=41.20;ReadPosRankSum=-2.282;VQSLOD=3.3851;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:99:0,112,1929	1/1:1,1:2:3.01:76,3,0	0/0:53,0:27:45.36:0,45,856	0/0:71,0:24:50.24:0,50,706	0/0:10,0:10:19.66:0,20,456	0/0:16,0:16:48.15:0,48,829	0/0:25,0:26:31.68:0,32,1059	1/1:9,5:13:27.09:628,27,0	0/0:15,0:15:36.12:0,36,650	0/0:19,0:19:45.02:0,45,727	0/0:14,0:14:35.79:0,36,607	0/0:15,0:15:33.11:0,33,607	0/0:16,0:16:41.73:0,42,728	0/0:12,0:13:30.10:0,30,544	0/0:15,0:14:39.11:0,39,646	0/0:14,0:15:37.20:0,37,674	1/1:15,6:22:24.86:875,25,0	1/1:3,6:11:19.56:364,20,0	0/0:9,0:9:27.08:0,27,452	0/0:12,0:11:26.69:0,27,417	0/0:45,0:47:7.80:0,8,2121	0/0:13,0:13:39.13:0,39,718	0/1:2,9:14:2.35:680,0,2	1/1:10,14:24:44.94:962,45,0	0/0:11,0:11:27.96:0,28,454	0/0:22,0:22:59.57:0,60,1010	0/0:23,0:23:63.22:0,63,1147	0/0:4,0:4:12.04:0,12,221
chr10	69828645	.	GTT	G	4642.66	PASS	AB=0.629;AC=17;AF=0.304;AN=56;BaseQRankSum=6.586;DP=743;FS=0.336;HRun=13;HaplotypeScore=107.5265;InbreedingCoeff=0.8936;MQ=78.50;MQ0=9;MQRankSum=-2.766;QD=20.36;ReadPosRankSum=3.589;VQSLOD=4.3214;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:29:74.58:693,75,0	0/0:1,0:3:2.84:0,3,29	0/0:59,0:29:37.45:0,37,353	0/0:48,0:25:26.67:0,27,261	1/1:5,27:32:80.77:759,81,0	0/0:39,0:41:98.79:0,99,1334	0/0:18,0:21:52.62:0,53,654	1/1:6,25:34:80.35:727,80,0	0/0:11,0:14:35.59:0,36,467	0/0:27,0:31:62.13:0,62,742	0/0:19,0:19:45.04:0,45,567	0/0:22,0:26:68.06:0,68,874	0/0:21,0:23:51.78:0,52,679	0/0:16,1:18:18.54:0,19,573	0/0:17,0:18:45.15:0,45,636	0/0:26,0:32:84.71:0,85,1066	0/0:35,0:40:99:0,100,1290	0/0:23,0:24:63.16:0,63,871	1/1:8,9:18:24.15:239,24,0	1/1:2,17:20:41.98:407,42,0	1/1:2,12:14:32.79:303,33,0	0/0:23,2:25:40.53:0,41,854	0/0:18,0:22:44.62:0,45,588	0/0:20,0:22:59.12:0,59,732	0/0:26,0:28:62.66:0,63,840	0/1:9,12:22:10.31:308,0,10	1/1:10,32:42:87.91:846,88,0	1/1:1,12:14:38.79:361,39,0
chr10	69830060	.	GT	G	101.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.447;DP=741;FS=9.973;HRun=1;HaplotypeScore=172.3164;InbreedingCoeff=0.9426;MQ=80.82;MQ0=0;MQRankSum=-2.075;QD=8.49;ReadPosRankSum=-3.091;VQSLOD=-0.6735;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,113,1084	0/0:5,0:5:9.02:0,9,90	0/0:22,0:22:66.16:0,66,921	0/0:19,0:19:47.24:0,47,639	0/0:27,0:27:49.37:0,49,506	0/0:17,0:17:51.17:0,51,744	0/0:37,0:37:99:0,111,1604	1/1:7,5:12:23.92:195,24,0	0/0:25,0:25:75.24:0,75,1074	0/0:26,0:26:78.21:0,78,1055	0/0:12,0:12:33.05:0,33,420	0/0:35,0:35:99:0,102,1425	0/0:24,0:24:72.14:0,72,1006	0/0:34,0:34:99:0,102,1438	0/0:24,0:24:69.22:0,69,987	0/0:26,0:26:78.23:0,78,1100	0/0:46,0:46:99:0,110,1001	0/0:39,0:39:75.58:0,76,749	0/0:24,0:24:69.99:0,70,644	0/0:21,0:21:38.38:0,38,354	0/0:40,0:40:84.02:0,84,828	0/0:27,0:27:77.96:0,78,1003	0/0:17,0:17:44.68:0,45,406	0/0:36,0:36:59.87:0,60,576	0/0:23,0:23:69.05:0,69,922	0/0:38,0:38:99:0,111,1091	0/0:19,0:19:53.94:0,54,499	0/0:13,0:13:36.05:0,36,351
chr10	69830062	.	G	GT	10831.80	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=20.053;DP=740;FS=10.278;HRun=1;HaplotypeScore=134.8108;InbreedingCoeff=0.9911;MQ=82.43;MQ0=0;MQRankSum=-4.196;QD=29.12;ReadPosRankSum=4.663;VQSLOD=3.5779;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,53:55:99:1468,112,0	1/1:0,5:5:9.03:124,9,0	0/0:25,0:25:66.18:0,66,858	0/0:19,0:19:53.89:0,54,601	1/1:2,23:27:54.17:733,54,0	0/0:17,0:17:51.17:0,51,710	0/0:39,0:39:99:0,111,1521	0/0:11,0:11:18.99:0,19,108	0/0:25,0:25:75.24:0,75,1023	0/0:26,0:26:75.24:0,75,1017	0/0:13,0:13:36.09:0,36,435	0/0:34,0:34:99:0,102,1370	0/0:26,0:26:60.64:0,61,928	0/0:34,0:34:99:0,102,1374	0/0:24,0:24:72.21:0,72,940	0/0:27,0:27:78.23:0,78,1035	1/1:2,41:43:99:1354,102,0	1/1:0,37:37:75.20:1020,75,0	1/1:3,17:21:59.94:725,60,0	1/1:2,19:21:39.10:532,39,0	1/1:2,36:39:81.88:1096,82,0	0/0:26,0:26:75.18:0,75,962	1/1:2,14:17:44.64:533,45,0	1/1:2,31:36:60.93:783,61,0	0/0:22,0:22:56.44:0,56,847	1/1:5,34:39:69.06:1281,69,0	1/1:1,18:19:52.98:703,53,0	1/1:1,11:13:36.09:480,36,0
chr10	69830068	.	GC	G	5663.83	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=20.925;DP=710;FS=1.586;HRun=1;HaplotypeScore=151.4029;InbreedingCoeff=0.9918;MQ=83.13;MQ0=0;MQRankSum=-2.778;QD=16.00;ReadPosRankSum=3.123;VQSLOD=5.2909;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:51,1:52:99:741,118,0	1/1:3,0:3:8.89:58,9,0	0/0:28,0:28:81.09:0,81,1025	0/0:16,0:16:44.80:0,45,484	1/1:24,2:26:57.16:365,57,0	0/0:19,0:19:56.92:0,57,734	0/0:38,0:38:99:0,114,1533	1/1:4,9:14:35.89:287,36,0	0/0:25,0:25:75.22:0,75,1024	0/0:27,0:27:81.19:0,81,1070	0/0:13,0:13:39.01:0,39,485	0/0:32,0:32:96.32:0,96,1354	0/0:29,0:29:80.94:0,81,1035	0/0:33,0:33:99:0,99,1385	0/0:24,0:24:72.08:0,72,954	0/0:27,0:27:81.13:0,81,1068	1/1:38,2:40:99:659,100,0	1/1:29,0:29:74.54:489,75,0	1/1:15,3:18:49.97:357,50,0	1/1:19,2:21:43.90:315,44,0	1/1:33,2:35:88.53:583,89,0	0/0:23,0:23:66.17:0,66,914	1/1:16,1:17:32.85:238,33,0	1/1:27,2:29:56.37:399,56,0	0/0:22,0:22:66.08:0,66,893	1/1:34,2:36:57.88:581,58,0	1/1:18,1:19:52.25:306,52,0	1/1:14,1:15:44.16:285,44,0
chr10	69830564	.	C	CT	2473.73	PASS	AB=0.600;AC=15;AF=0.268;AN=56;BaseQRankSum=-3.182;DP=530;FS=5.115;HRun=10;HaplotypeScore=55.8627;InbreedingCoeff=0.8692;MQ=72.53;MQ0=1;MQRankSum=-0.891;QD=16.83;ReadPosRankSum=-0.026;VQSLOD=3.8314;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:27:46.24:227,46,0	0/0:12,0:12:29.96:0,30,246	0/0:12,0:13:26.45:0,26,203	0/0:13,0:11:8.73:0,9,74	1/1:4,2:23:43.21:250,43,0	0/0:22,0:22:50.89:0,51,419	0/0:11,0:11:20.97:0,21,172	0/0:5,0:25:36.60:0,37,109	0/0:14,0:14:29.93:0,30,246	0/0:28,0:28:62.89:0,63,517	0/0:21,1:22:15.92:0,16,334	0/0:19,0:19:47.94:0,48,394	0/0:23,0:24:46.92:0,47,370	0/0:14,1:15:9.96:0,10,288	0/0:30,0:30:74.86:0,75,616	0/0:13,0:13:29.94:0,30,243	0/0:18,0:19:37.93:0,38,298	0/0:23,0:23:55.94:0,56,449	1/1:3,23:26:69.12:710,69,0	1/1:3,14:17:36.02:359,36,0	1/1:1,5:6:12.03:128,12,0	0/0:25,0:28:60.99:0,61,480	0/0:16,0:16:37.49:0,37,299	0/0:17,0:17:35.89:0,36,290	0/0:17,0:18:40.98:0,41,325	0/1:9,18:27:10.78:506,0,11	1/1:2,16:18:20.47:423,20,0	1/1:1,2:3:6.02:64,6,0
chr10	69833709	.	T	TGTGCAAAAA	40092.71	PASS	AB=0.636;AC=27;AF=0.482;AN=56;BaseQRankSum=-4.336;DP=726;FS=4.669;HRun=0;HaplotypeScore=184.2519;InbreedingCoeff=0.9282;MQ=77.45;MQ0=0;MQRankSum=-20.312;QD=111.06;ReadPosRankSum=-3.531;VQSLOD=4.6130;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,26:49:99:5137,120,0	1/1:3,2:5:12.04:453,12,0	0/0:24,0:24:66.22:0,66,1771	0/0:19,0:19:51.16:0,51,1409	1/1:13,21:37:99:4115,102,0	0/0:24,0:24:60.21:0,60,1817	0/0:20,0:20:60.16:0,60,1579	1/1:18,13:36:99:4514,108,0	0/0:23,0:23:63.22:0,63,1955	0/0:25,0:25:75.26:0,75,2268	0/0:17,0:17:48.16:0,48,1469	0/0:28,0:28:81.28:0,81,2469	0/0:29,0:29:84.29:0,84,2583	0/0:30,0:30:90.30:0,90,2686	0/0:39,0:39:99:0,111,3235	0/0:34,0:34:99:0,99,2938	1/1:12,15:31:66.23:2982,66,0	1/1:6,10:16:42.14:1904,42,0	1/1:12,5:19:48.12:1931,48,0	1/1:6,20:29:84.25:3813,84,0	1/1:8,2:12:24.03:853,24,0	0/0:25,0:25:72.25:0,72,2140	1/1:5,25:31:87.30:3939,87,0	1/1:8,14:24:51.65:2223,52,0	0/0:28,0:28:78.27:0,78,2386	0/1:12,14:28:11.84:3439,0,12	1/1:13,16:32:81.28:3576,81,0	1/1:5,6:12:27.09:1213,27,0
chr10	69834970	.	GGT	G	827.06	PASS	AB=0.913;AC=3;AF=0.054;AN=56;BaseQRankSum=6.260;DP=830;FS=5.947;HRun=0;HaplotypeScore=111.8839;InbreedingCoeff=0.6044;MQ=72.16;MQ0=1;MQRankSum=-0.037;QD=15.32;ReadPosRankSum=-4.151;VQSLOD=2.3699;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,120,1938	0/0:4,0:4:9.03:0,9,148	0/0:43,0:35:64.48:0,64,1012	0/0:46,0:42:34.45:0,34,1006	0/0:23,1:24:26.02:0,26,946	0/0:17,1:18:10.97:0,11,687	0/0:23,0:23:57.15:0,57,905	1/1:8,25:33:75.19:912,75,0	0/0:30,0:30:75.26:0,75,1227	0/0:37,1:38:50.10:0,50,1339	0/0:25,0:25:66.23:0,66,1082	0/0:35,0:35:93.30:0,93,1495	0/0:26,0:26:29.17:0,29,988	0/0:25,0:25:60.19:0,60,957	0/0:40,0:40:96.25:0,96,1550	0/0:37,1:38:62.11:0,62,1486	0/0:32,0:31:84.27:0,84,1340	0/1:19,2:21:20.23:20,0,706	0/0:25,0:25:46.05:0,46,754	0/0:28,0:28:75.26:0,75,1229	0/0:62,2:64:60.10:0,60,2485	0/0:20,0:20:45.15:0,45,738	0/0:16,0:16:36.12:0,36,590	0/0:34,0:34:84.24:0,84,1342	0/0:31,0:31:84.29:0,84,1377	0/0:27,0:27:66.23:0,66,1083	0/0:22,2:24:19.99:0,20,847	0/0:15,0:15:39.11:0,39,609
chr10	69835192	.	C	CATATAT	4424.79	PASS	AB=0.579;AC=21;AF=0.438;AN=48;BaseQRankSum=1.964;DP=494;FS=2.190;HRun=0;HaplotypeScore=104.7016;InbreedingCoeff=0.8392;MQ=65.33;MQ0=1;MQRankSum=-5.148;QD=20.39;ReadPosRankSum=-2.872;VQSLOD=3.9034;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:15:0:0,0,0	1/1:1,6:9:6.02:79,6,0	1/1:9,0:7:2.92:17,3,0	./.	0/1:5,14:23:0:0,0,0	0/0:20,0:20:51.16:0,51,1075	0/0:12,0:12:27.04:0,27,449	1/1:9,0:45:79.33:842,79,0	0/0:19,0:19:42.10:0,42,780	0/0:38,0:38:93.28:0,93,1791	0/0:25,0:25:62.93:0,63,1159	0/0:9,0:9:24.07:0,24,484	0/0:29,0:29:72.20:0,72,1455	0/0:21,0:21:57.17:0,57,1151	0/0:26,0:26:66.23:0,66,1445	0/0:24,0:24:63.14:0,63,1155	1/1:1,1:15:12.04:338,12,0	1/1:1,9:13:12.04:362,12,0	1/1:2,10:16:42.13:1059,42,0	0/1:7,7:20:0:0,0,0	./.	0/0:14,0:14:36.11:0,36,711	./.	./.	0/0:23,0:23:69.17:0,69,1314	1/1:1,10:16:33.06:983,33,0	1/1:4,12:19:6.02:203,6,0	1/1:3,8:15:21.07:542,21,0
chr10	69836045	.	CGT	C	326.95	PASS	AB=0.912;AC=14;AF=0.280;AN=50;BaseQRankSum=6.027;DP=546;FS=0.000;HRun=0;HaplotypeScore=89.5617;InbreedingCoeff=-0.0163;MQ=53.19;MQ0=15;MQRankSum=3.654;QD=1.33;ReadPosRankSum=2.875;VQSLOD=1.3187;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:37:32.08:165,32,0	0/1:9,0:9:16.26:16,0,19	./.	./.	1/1:12,0:20:22.73:113,23,0	0/1:16,2:18:12.50:13,0,241	0/0:24,0:24:33.08:0,33,469	0/0:24,0:21:24.66:0,25,215	0/1:17,1:18:0.19:0,0,377	0/1:24,1:25:38.59:39,0,354	0/1:13,3:17:30.54:31,0,329	0/1:21,2:23:3.23:3,0,311	0/0:15,0:30:29.93:0,30,278	0/1:16,1:17:36.89:37,0,283	0/1:15,1:15:9.19:9,0,273	0/1:24,5:29:40.08:40,0,634	0/0:16,0:16:3.46:0,3,25	0/0:10,0:9:3.01:0,3,41	0/0:26,0:25:7.23:0,7,61	0/0:19,0:19:14.66:0,15,122	0/0:11,0:11:2.98:0,3,21	0/1:12,1:14:8.28:8,0,437	0/0:12,0:10:2.98:0,3,26	./.	0/0:19,2:21:11.79:0,12,572	0/0:31,0:30:36.88:0,37,249	0/0:26,0:28:27.75:0,28,208	0/0:11,0:14:18.43:0,18,151
chr10	69836141	.	C	CTTGTGTTCTCATGA	39460.33	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-2.811;DP=507;FS=6.888;HRun=0;HaplotypeScore=180.6606;InbreedingCoeff=0.9964;MQ=79.46;MQ0=0;MQRankSum=-17.705;QD=156.59;ReadPosRankSum=-1.482;VQSLOD=4.6249;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,19:33:81.28:4909,81,0	1/1:6,5:11:21.07:1402,21,0	0/0:19,0:19:57.19:0,57,1942	0/0:28,0:27:34.03:0,34,2378	1/1:6,13:21:51.18:3166,51,0	0/0:14,0:13:42.13:0,42,1603	0/0:32,0:32:90.31:0,90,3486	1/1:21,3:26:69.22:3184,69,0	0/0:18,0:18:51.15:0,51,1987	0/0:20,0:20:60.21:0,60,2537	0/0:16,0:16:42.14:0,42,1745	0/0:16,0:16:45.15:0,45,1674	0/0:19,0:19:57.18:0,57,1983	0/0:23,0:23:69.22:0,69,2726	0/0:15,0:15:39.13:0,39,1474	0/0:18,0:18:48.16:0,48,1921	1/1:10,6:16:39.13:2675,39,0	1/1:6,5:11:33.11:2183,33,0	1/1:9,4:15:45.13:2008,45,0	1/1:5,6:11:33.11:1929,33,0	1/1:9,5:16:30.10:1816,30,0	0/0:5,0:5:15.05:0,15,633	1/1:11,9:20:51.18:2946,51,0	1/1:5,3:8:20.86:895,21,0	0/0:12,0:12:30.10:0,30,1202	1/1:14,12:26:78.27:5225,78,0	1/1:15,12:27:78.27:5080,78,0	1/1:3,8:11:33.11:2042,33,0
chr10	69852194	.	TA	T	794.46	PASS	AB=0.903;AC=13;AF=0.232;AN=56;BaseQRankSum=10.890;DP=578;FS=2.427;HRun=14;HaplotypeScore=64.9890;InbreedingCoeff=0.6162;MQ=71.68;MQ0=0;MQRankSum=-0.701;QD=4.12;ReadPosRankSum=1.991;VQSLOD=1.0022;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:28:71.80:0,72,622	0/0:9,0:9:21.02:0,21,195	0/0:20,1:16:5.30:0,5,60	0/1:12,1:11:16.31:31,0,16	0/0:30,2:33:45.72:0,46,679	0/0:27,0:27:65.90:0,66,595	0/0:13,0:13:33.04:0,33,306	1/1:5,0:24:38.69:113,39,0	0/0:10,2:12:20.50:0,21,172	0/1:23,3:26:13.68:14,0,305	0/0:20,0:20:27.01:0,27,243	0/0:17,1:18:18.45:0,18,310	0/0:13,0:14:3.45:0,3,172	0/0:13,0:13:30.02:0,30,274	0/0:19,0:20:38.78:0,39,328	0/0:18,1:19:24.42:0,24,354	1/1:4,22:26:53.51:370,54,0	1/1:3,13:16:35.66:247,36,0	0/0:23,2:27:12.56:0,13,373	0/1:32,5:38:1.26:1,0,517	0/0:12,0:12:3.27:0,3,119	0/0:18,3:22:0.16:0,0,352	1/1:6,0:19:20.11:58,20,0	1/1:2,0:31:46.84:135,47,0	0/0:17,0:19:39.34:0,39,344	0/0:20,1:21:12.44:0,12,255	0/0:20,1:21:17.79:0,18,305	0/0:15,1:16:18.42:0,18,298
chr10	69852980	.	C	CAA	1422.37	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.169;DP=730;FS=0.709;HRun=1;HaplotypeScore=107.7989;InbreedingCoeff=0.9989;MQ=72.44;MQ0=0;MQRankSum=-2.942;QD=49.05;ReadPosRankSum=-4.959;VQSLOD=2.1000;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,160,2407	0/0:16,0:16:48.15:0,48,711	0/0:10,0:10:30.10:0,30,444	0/0:18,0:19:47.59:0,48,649	0/0:21,0:21:63.21:0,63,961	0/0:21,0:21:63.20:0,63,940	0/0:20,0:20:60.20:0,60,919	1/1:4,24:29:87.22:1517,87,0	0/0:27,0:27:81.28:0,81,1240	0/0:34,0:34:96.32:0,96,1444	0/0:14,0:14:42.13:0,42,622	0/0:31,0:31:93.30:0,93,1402	0/0:28,0:28:75.22:0,75,1116	0/0:21,0:21:63.21:0,63,965	0/0:36,0:36:99:0,99,1512	0/0:24,0:24:72.23:0,72,1075	0/0:36,0:36:99:0,108,1654	0/0:31,0:31:87.26:0,87,1307	0/0:26,0:26:78.21:0,78,1129	0/0:22,0:22:63.21:0,63,965	0/0:40,0:40:99:0,120,1813	0/0:22,0:22:66.22:0,66,1010	0/0:21,0:21:60.16:0,60,856	0/0:33,0:33:93.30:0,93,1398	0/0:14,0:14:42.14:0,42,642	0/0:37,0:37:99:0,102,1504	0/0:33,0:32:96.33:0,96,1468	0/0:10,0:10:30.10:0,30,459
chr10	69853233	.	TG	T	3440.79	PASS	AB=0.899;AC=32;AF=0.571;AN=56;BaseQRankSum=0.275;DP=556;FS=8.625;HRun=11;HaplotypeScore=72.4583;InbreedingCoeff=0.4691;MQ=81.35;MQ0=0;MQRankSum=-0.970;QD=9.48;ReadPosRankSum=4.643;VQSLOD=2.1325;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:23:0.47:0,0,1	0/1:3,0:8:0.02:1,0,0	0/1:16,2:18:45.58:54,0,46	0/1:17,2:19:67.81:68,0,97	0/0:20,0:21:8.08:0,8,47	1/1:4,15:18:32.80:270,33,0	1/1:4,13:19:45.06:337,45,0	1/1:18,9:27:23.91:197,24,0	1/1:6,16:22:29.92:246,30,0	1/1:11,7:18:23.94:196,24,0	1/1:6,7:13:20.95:172,21,0	1/1:5,9:15:22.28:176,22,0	1/1:8,17:26:40.91:325,41,0	1/1:2,16:19:40.96:326,41,0	1/1:5,16:22:43.97:351,44,0	1/1:6,13:19:35.95:296,36,0	0/0:27,0:30:35.59:0,36,263	0/0:19,0:21:42.79:0,43,411	0/0:16,1:18:5.33:0,5,247	0/1:18,3:21:19.21:19,0,160	0/0:20,0:26:3.35:0,3,15	1/1:8,8:16:18.43:148,18,0	0/1:15,1:16:6.15:6,0,127	0/1:18,6:24:81.20:81,0,239	1/1:9,11:20:1.21:171,1,0	0/0:9,0:12:5.87:0,6,39	0/0:34,1:35:8.73:0,9,233	0/0:6,0:7:5.88:0,6,47
chr10	69853857	.	GC	G	942.36	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.033;DP=686;FS=2.468;HRun=2;HaplotypeScore=83.0987;InbreedingCoeff=0.9978;MQ=93.29;MQ0=0;MQRankSum=-0.761;QD=34.90;ReadPosRankSum=-3.955;VQSLOD=2.4153;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1729	0/0:8,0:8:24.07:0,24,341	0/0:31,0:31:61.69:0,62,1196	0/0:29,0:29:72.03:0,72,987	0/0:22,0:22:66.21:0,66,968	0/0:23,0:23:69.22:0,69,1009	0/0:19,0:19:54.16:0,54,770	1/1:0,27:27:81.25:1037,81,0	0/0:33,0:33:96.33:0,96,1436	0/0:30,0:30:90.30:0,90,1329	0/0:16,0:16:48.16:0,48,717	0/0:30,0:30:90.30:0,90,1349	0/0:20,0:20:60.19:0,60,878	0/0:25,0:25:75.25:0,75,1124	0/0:22,0:22:63.21:0,63,944	0/0:16,0:16:48.16:0,48,719	0/0:33,0:33:99:0,99,1464	0/0:34,0:34:96.33:0,96,1437	0/0:22,0:22:63.21:0,63,942	0/0:14,0:14:42.14:0,42,629	0/0:34,0:34:99:0,99,1480	0/0:20,0:20:57.19:0,57,852	0/0:24,0:24:69.23:0,69,1022	0/0:28,0:28:84.28:0,84,1258	0/0:20,0:20:60.20:0,60,899	0/0:33,0:33:93.31:0,93,1375	0/0:21,0:21:63.21:0,63,944	0/0:12,0:12:36.12:0,36,540
chr10	69854567	.	G	GT	12527.50	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-16.147;DP=618;FS=2.922;HRun=1;HaplotypeScore=60.2368;InbreedingCoeff=0.9986;MQ=85.60;MQ0=0;MQRankSum=-8.392;QD=41.62;ReadPosRankSum=0.375;VQSLOD=5.2781;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,43:43:99:1888,126,0	1/1:0,12:12:33.11:494,33,0	0/0:30,0:30:81.24:0,81,1005	0/0:12,0:13:19.57:0,20,302	1/1:1,17:18:51.04:689,51,0	0/0:18,0:18:54.18:0,54,698	0/0:23,0:23:69.22:0,69,896	1/1:1,24:25:72.22:1038,72,0	0/0:22,0:22:63.20:0,63,818	0/0:23,0:23:66.21:0,66,857	0/0:23,0:23:69.22:0,69,895	0/0:26,0:26:78.24:0,78,997	0/0:20,0:20:60.19:0,60,778	0/0:23,0:23:69.19:0,69,865	0/0:26,0:26:75.24:0,75,971	0/0:20,0:20:60.20:0,60,779	1/1:0,26:26:69.23:1033,69,0	1/1:0,14:14:39.13:584,39,0	1/1:1,20:21:63.17:916,63,0	1/1:2,19:21:54.14:784,54,0	1/1:2,20:22:57.19:854,57,0	0/0:30,0:30:87.28:0,87,1129	1/1:0,22:22:63.21:943,63,0	1/1:0,20:20:57.19:854,57,0	0/0:20,0:20:60.19:0,60,767	1/1:0,23:23:69.22:1013,69,0	1/1:1,26:27:75.25:1124,75,0	1/1:0,7:7:21.07:314,21,0
chr10	69854735	.	A	ACCCCTCCTCGGG	3392.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.812;DP=663;FS=27.513;HRun=0;HaplotypeScore=248.8827;InbreedingCoeff=0.9997;MQ=84.02;MQ0=0;MQRankSum=-5.995;QD=106.02;ReadPosRankSum=-4.727;VQSLOD=1.8786;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:92.55:0,93,3178	0/0:15,0:15:42.08:0,42,1424	0/0:18,0:18:39.11:0,39,1233	0/0:23,0:23:51.74:0,52,1956	0/0:32,0:32:87.23:0,87,2845	0/0:13,0:13:39.12:0,39,1349	0/0:22,0:22:60.21:0,60,2017	1/1:25,4:32:78.23:3393,78,0	0/0:15,0:15:45.14:0,45,1486	0/0:19,0:19:48.16:0,48,1762	0/0:16,0:16:36.12:0,36,1326	0/0:24,0:24:69.19:0,69,2304	0/0:16,0:16:48.13:0,48,1582	0/0:26,0:26:72.25:0,72,2536	0/0:22,0:22:63.22:0,63,2198	0/0:25,0:24:63.18:0,63,2037	0/0:29,0:29:75.23:0,75,2456	0/0:25,0:25:60.21:0,60,2209	0/0:22,0:22:51.15:0,51,1571	0/0:22,0:22:54.15:0,54,1742	0/0:36,0:36:99:0,102,3600	0/0:24,0:24:72.24:0,72,2565	0/0:20,0:20:50.65:0,51,1642	0/0:30,0:30:75.21:0,75,2531	0/0:19,0:19:57.20:0,57,1996	0/0:25,0:25:72.20:0,72,2507	0/0:30,0:29:84.22:0,84,2740	0/0:26,0:26:72.22:0,72,2409
chr10	69854812	.	C	CA	3684.68	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-10.547;DP=624;FS=4.368;HRun=4;HaplotypeScore=61.0450;InbreedingCoeff=0.9998;MQ=89.03;MQ0=0;MQRankSum=0.136;QD=36.48;ReadPosRankSum=1.411;VQSLOD=4.1573;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,1451	0/0:16,0:16:42.12:0,42,476	0/0:24,0:24:60.53:0,61,667	0/0:22,0:22:51.58:0,52,592	0/0:20,0:20:60.17:0,60,681	0/0:13,0:13:36.10:0,36,408	0/0:24,0:24:69.16:0,69,764	0/0:15,0:15:42.12:0,42,476	0/0:22,0:22:66.19:0,66,749	0/0:30,0:30:84.22:0,84,943	0/0:12,0:12:36.07:0,36,388	0/0:26,0:26:78.22:0,78,885	0/0:26,0:26:75.21:0,75,847	0/0:22,0:22:63.18:0,63,715	0/0:21,0:21:57.16:0,57,647	0/0:24,0:23:66.19:0,66,749	1/1:1,24:25:66.22:903,66,0	1/1:0,21:21:60.20:821,60,0	0/0:17,0:17:48.14:0,48,545	0/0:17,0:17:51.15:0,51,578	0/0:22,0:22:36.35:0,36,654	0/0:23,0:23:60.17:0,60,680	1/1:3,21:24:62.91:812,63,0	1/1:1,30:31:84.28:1149,84,0	0/0:27,0:26:78.21:0,78,874	0/0:28,0:28:81.23:0,81,919	0/0:15,0:14:42.12:0,42,476	0/0:13,0:13:39.11:0,39,442
chr10	69855424	.	ATTT	A	931.36	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.991;DP=602;FS=1.461;HRun=4;HaplotypeScore=119.8163;InbreedingCoeff=0.9537;MQ=84.28;MQ0=0;MQRankSum=-8.785;QD=16.63;ReadPosRankSum=1.244;VQSLOD=0.0305;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,2890	0/0:2,0:2:6.02:0,6,142	0/0:21,0:21:60.20:0,60,1295	0/0:20,0:19:57.11:0,57,1161	0/0:11,0:11:33.11:0,33,781	0/0:19,0:19:57.20:0,57,1348	0/0:22,0:22:66.21:0,66,1516	0/0:31,0:31:87.30:0,87,2035	0/0:27,0:27:78.25:0,78,1798	0/0:30,0:30:90.31:0,90,2111	0/0:19,0:19:57.20:0,57,1352	0/0:23,0:23:66.23:0,66,1522	0/0:18,0:18:48.16:0,48,1131	0/0:22,0:21:63.22:0,63,1460	0/0:36,0:36:99:0,108,2555	0/0:33,0:33:99:0,99,2278	1/1:6,2:8:9:94,9,0	1/1:4,8:13:27:301,27,0	0/0:21,0:21:63.22:0,63,1470	0/0:18,0:18:54.17:0,54,1229	0/0:33,0:33:99:0,99,2341	0/0:26,0:26:75.24:0,75,1728	1/1:2,15:17:36.09:412,36,0	1/1:8,10:18:23.57:280,24,0	0/0:13,0:13:39.13:0,39,915	0/0:27,0:27:81.28:0,81,1915	0/0:23,0:23:66.23:0,66,1560	0/0:10,0:10:30.09:0,30,663
chr10	69855429	.	AGGTTCC	A	1621.50	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.342;DP=590;FS=2.386;HRun=0;HaplotypeScore=148.6314;InbreedingCoeff=0.9601;MQ=86.37;MQ0=0;MQRankSum=-8.965;QD=43.82;ReadPosRankSum=1.448;VQSLOD=3.4563;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,4887	0/0:4,0:4:12.04:0,12,409	0/0:25,0:25:69.24:0,69,2455	0/0:19,0:18:54.18:0,54,1745	0/0:15,0:15:45.15:0,45,1660	0/0:20,0:20:60.21:0,60,2164	0/0:22,0:22:66.23:0,66,2429	0/0:30,0:30:87.29:0,87,2981	0/0:26,0:26:78.27:0,78,2835	0/0:30,0:30:90.31:0,90,3195	0/0:19,0:19:57.20:0,57,2118	0/0:20,0:20:60.21:0,60,2184	0/0:18,0:18:51.18:0,51,1828	0/0:26,0:25:75.26:0,75,2811	0/0:36,0:36:99:0,108,3947	0/0:32,0:32:93.31:0,93,3352	1/1:0,2:2:6.02:120,6,0	1/1:1,8:9:24.08:457,24,0	0/0:20,0:20:60.20:0,60,1983	0/0:17,0:17:51.18:0,51,1868	0/0:34,0:34:99:0,102,3663	0/0:24,0:24:72.25:0,72,2647	1/1:1,15:16:39.13:725,39,0	1/1:0,10:10:23.66:473,24,0	0/0:13,0:13:39.13:0,39,1409	0/0:24,0:24:72.25:0,72,2607	0/0:24,0:24:69.24:0,69,2509	0/0:9,0:9:27.09:0,27,1015
chr10	69855570	.	GTTTTTGTTTTTGTTTTTTTGTTTTTTGT	G	2627.71	PASS	AB=0.793;AC=12;AF=0.214;AN=56;BaseQRankSum=-0.712;DP=498;FS=12.598;HRun=0;HaplotypeScore=348.4005;InbreedingCoeff=0.7596;MQ=72.37;MQ0=2;MQRankSum=1.056;QD=30.91;ReadPosRankSum=-3.032;VQSLOD=0.4348;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.18:0,78,3556	0/1:7,0:7:99:183,0,283	0/0:37,0:25:38.29:0,38,858	0/0:20,0:10:12.32:0,12,197	0/0:31,0:31:86.96:0,87,4584	0/0:18,0:18:51.11:0,51,3756	0/0:13,0:13:33.01:0,33,2148	0/0:31,0:29:64.98:0,65,2097	0/0:14,0:14:39.10:0,39,2795	0/0:29,0:29:78.15:0,78,4936	0/0:13,0:13:36.02:0,36,1654	0/0:15,0:15:45.10:0,45,1802	0/0:14,0:14:36.01:0,36,2533	0/0:18,0:17:42.01:0,42,3882	0/0:17,0:17:45.01:0,45,3071	0/0:16,0:16:48.16:0,48,3766	0/0:17,0:17:36.05:0,36,1842	0/0:17,0:17:35.81:0,36,1434	1/1:17,0:17:42.09:674,42,0	1/1:5,0:14:21.07:495,21,0	1/1:6,0:6:12.04:203,12,0	0/0:9,0:9:27.09:0,27,2201	0/0:13,0:13:32.99:0,33,2062	0/0:13,0:13:23.35:0,23,1111	0/0:32,0:32:77.99:0,78,6325	0/1:5,12:17:99:452,0,150	1/1:20,0:20:47.77:663,48,0	1/1:4,0:4:8.69:135,9,0
chr10	69855582	.	GTT	G	2875.05	PASS	AB=0.785;AC=13;AF=0.232;AN=56;BaseQRankSum=6.689;DP=513;FS=1.417;HRun=7;HaplotypeScore=108.1411;InbreedingCoeff=0.5893;MQ=60.60;MQ0=14;MQRankSum=-7.562;QD=17.22;ReadPosRankSum=1.813;VQSLOD=1.2649;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,9:29:68.45:720,68,0	0/0:8,0:8:0.88:0,1,2	0/0:33,0:16:20.05:0,20,226	0/0:26,1:9:2.81:0,3,17	1/1:13,16:34:77.65:785,78,0	0/0:23,0:20:47.44:0,47,782	0/0:11,0:11:33.04:0,33,532	0/1:21,14:32:40.57:501,0,41	0/0:14,0:14:37.83:0,38,608	0/0:32,0:31:84.10:0,84,1264	0/0:18,0:19:40.42:0,40,526	0/0:16,0:16:37.23:0,37,489	0/0:14,0:13:33.11:0,33,556	0/0:18,0:16:47.18:0,47,754	0/0:18,0:17:38.51:0,39,624	0/0:19,0:18:46.20:0,46,664	1/1:5,9:17:35.91:381,36,0	1/1:10,6:16:4.94:248,5,0	0/0:16,0:14:24.36:0,24,187	0/1:9,0:9:10.37:10,0,32	0/0:4,0:4:3:0,3,26	0/0:13,0:13:34.63:0,35,512	0/1:5,7:13:64.78:185,0,65	1/1:2,11:13:12.10:216,12,0	0/0:31,0:31:84.52:0,85,1226	0/0:13,0:13:13.83:0,14,100	0/0:13,0:13:21.33:0,21,158	0/0:4,0:4:10.19:0,10,69
chr10	69855583	.	T	TTTTTG	3078.05	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=6.058;DP=520;FS=4.562;HRun=0;HaplotypeScore=147.6336;InbreedingCoeff=0.6729;MQ=61.37;MQ0=14;MQRankSum=-8.506;QD=19.36;ReadPosRankSum=1.745;VQSLOD=3.1369;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,5:29:72.05:1061,72,0	0/0:7,0:7:9.35:0,9,76	0/0:33,0:16:19.20:0,19,234	0/0:29,0:10:0.85:0,1,19	1/1:29,5:34:81.49:1002,81,0	0/0:22,0:19:44.70:0,45,845	0/0:11,0:11:29.94:0,30,544	0/1:37,0:33:54.70:273,0,55	0/0:14,0:14:37.36:0,37,643	0/0:33,0:32:76.93:0,77,1305	0/0:19,0:19:38.36:0,38,475	0/0:17,0:17:36.31:0,36,533	0/0:16,0:15:33.09:0,33,603	0/0:19,0:17:47.37:0,47,846	0/0:18,0:17:36.56:0,37,638	0/0:20,0:19:48.28:0,48,738	1/1:17,0:17:32.65:294,33,0	1/1:14,0:14:24.69:307,25,0	0/0:16,0:14:24.36:0,24,188	0/0:9,0:9:3.80:0,4,37	0/0:4,0:4:3:0,3,26	0/0:13,0:13:34.15:0,34,551	0/1:14,0:14:22.10:139,0,22	1/1:14,0:14:20.09:179,20,0	0/0:31,0:31:83.11:0,83,1274	0/0:13,0:13:15.70:0,16,103	0/0:13,0:13:21.33:0,21,158	0/0:4,0:4:10.49:0,10,70
chr10	69855590	.	GT	G	636.85	PASS	AB=0.778;AC=10;AF=0.200;AN=50;BaseQRankSum=7.083;DP=508;FS=1.953;HRun=7;HaplotypeScore=115.0293;InbreedingCoeff=0.0207;MQ=56.07;MQ0=20;MQRankSum=-5.109;QD=3.98;ReadPosRankSum=-2.453;VQSLOD=-0.4358;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,11:28:99:169,0,122	0/0:9,0:10:5.76:0,6,19	0/0:36,0:12:0.87:0,1,68	0/0:29,0:9:4.63:0,5,22	0/1:23,11:34:99:149,0,172	0/0:22,0:18:29.65:0,30,449	0/0:11,0:11:23.86:0,24,283	0/1:24,13:32:38.03:302,0,38	0/0:14,0:14:36.05:0,36,423	0/0:31,0:30:77.95:0,78,915	0/0:20,0:21:24.59:0,25,296	0/0:15,0:15:28.24:0,28,281	0/0:17,0:16:32.82:0,33,402	0/0:20,0:18:39.13:0,39,488	0/0:20,0:19:32.51:0,33,406	0/0:19,0:18:36.84:0,37,346	0/1:11,6:17:78.89:108,0,79	0/1:11,2:14:7.66:8,0,87	./.	1/1:10,0:10:0.47:1,0,0	./.	0/0:16,0:16:32.97:0,33,315	0/1:13,3:16:14.74:15,0,144	0/0:13,0:13:17.04:0,17,110	0/0:31,0:31:79.73:0,80,809	0/0:13,0:13:0.72:0,1,1	1/1:4,0:4:0.47:1,0,0	./.
chr10	69855605	.	T	TG	331.66	PASS	AB=0.845;AC=3;AF=0.054;AN=56;BaseQRankSum=4.118;DP=574;FS=7.212;HRun=0;HaplotypeScore=112.7427;InbreedingCoeff=-0.0417;MQ=52.78;MQ0=25;MQRankSum=-2.072;QD=3.49;ReadPosRankSum=2.199;VQSLOD=2.8112;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,7:27:88.36:133,0,88	0/0:10,0:10:26.23:0,26,173	0/0:46,0:12:25.71:0,26,160	0/1:31,0:6:0.34:0,0,16	0/1:24,13:37:99:288,0,174	0/0:19,0:15:44.81:0,45,391	0/0:9,0:9:26.91:0,27,218	0/0:40,0:35:13.72:0,14,282	0/0:10,0:10:24.87:0,25,183	0/0:26,0:25:71.79:0,72,599	0/0:20,0:20:39.38:0,39,360	0/0:13,0:13:35.93:0,36,322	0/0:15,0:14:32.25:0,32,252	0/0:22,0:20:54.98:0,55,435	0/0:18,0:17:47.06:0,47,402	0/0:19,0:18:50.65:0,51,450	0/0:17,0:17:34.38:0,34,214	0/0:14,0:14:30.96:0,31,186	0/0:18,0:13:32.86:0,33,265	0/0:25,0:25:44.85:0,45,366	0/0:5,0:4:9:0,9,81	0/0:17,0:17:47.56:0,48,422	0/0:22,0:22:51.66:0,52,375	0/0:20,0:20:18.92:0,19,148	0/0:30,0:30:81.14:0,81,698	0/0:25,0:25:44.68:0,45,375	0/0:6,0:6:17.89:0,18,136	0/0:13,0:13:37.17:0,37,301
chr10	69855609	.	T	TGG	610.59	PASS	AB=0.667;AC=1;AF=0.018;AN=56;BaseQRankSum=2.585;DP=568;FS=6.558;HRun=0;HaplotypeScore=117.3631;InbreedingCoeff=-0.0230;MQ=54.13;MQ0=24;MQRankSum=-0.261;QD=15.26;ReadPosRankSum=-1.303;VQSLOD=2.5737;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:59.06:0,59,686	0/0:9,0:9:21.53:0,22,260	0/0:45,0:10:14.62:0,15,204	0/0:32,0:8:7.94:0,8,84	0/0:35,0:35:90.01:0,90,1041	0/0:18,0:15:45.12:0,45,617	0/0:9,0:9:27.09:0,27,395	0/1:20,19:35:99:685,0,156	0/0:9,0:9:27.03:0,27,343	0/0:24,0:23:69.15:0,69,965	0/0:20,0:20:45.12:0,45,605	0/0:14,0:14:41.62:0,42,544	0/0:16,0:15:36.09:0,36,456	0/0:22,0:20:57.12:0,57,740	0/0:19,0:18:51.15:0,51,688	0/0:18,0:17:51.15:0,51,669	0/0:16,0:16:31.34:0,31,275	0/0:15,0:15:35.87:0,36,354	0/0:19,0:14:39.13:0,39,536	0/0:25,0:25:48.16:0,48,669	0/0:6,0:5:12.02:0,12,133	0/0:20,0:20:54.15:0,54,706	0/0:21,0:21:59.91:0,60,627	0/0:18,0:18:30.18:0,30,301	0/0:30,0:30:87.68:0,88,1142	0/0:26,0:26:44.17:0,44,579	0/0:6,0:6:18.06:0,18,246	0/0:13,0:13:39.12:0,39,541
chr10	69855920	.	TGTAGGCTC	T	726.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.828;DP=550;FS=1.160;HRun=0;HaplotypeScore=139.0470;InbreedingCoeff=0.9881;MQ=95.69;MQ0=0;MQRankSum=-3.720;QD=48.46;ReadPosRankSum=-1.808;VQSLOD=3.3413;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,4622	0/0:7,0:7:21.07:0,21,821	0/0:26,0:26:78.26:0,78,3093	0/0:28,0:28:78.23:0,78,3021	0/0:15,0:15:29.84:0,30,1284	0/0:22,0:22:66.23:0,66,2479	0/0:20,0:20:60.21:0,60,2714	1/1:3,12:15:33.07:821,33,0	0/0:12,0:12:36.12:0,36,1543	0/0:14,0:14:30.10:0,30,1094	0/0:13,0:13:27.09:0,27,1124	0/0:28,0:28:84.29:0,84,3461	0/0:18,0:18:54.17:0,54,2221	0/0:15,0:15:42.14:0,42,1549	0/0:20,0:20:57.20:0,57,2394	0/0:18,0:18:54.17:0,54,2301	0/0:30,0:30:87.30:0,87,3749	0/0:29,0:29:87.30:0,87,3765	0/0:11,0:11:33.11:0,33,1441	0/0:9,0:9:27.09:0,27,1173	0/0:42,0:42:99:0,123,5174	0/0:13,0:13:33.11:0,33,1314	0/0:11,0:11:21.07:0,21,783	0/0:19,0:19:54.19:0,54,2322	0/0:18,0:18:54.19:0,54,2020	0/0:18,0:18:54.19:0,54,2412	0/0:17,0:17:51.18:0,51,1997	0/0:23,0:23:69.24:0,69,3114
chr10	69858203	.	TAC	T	7148.49	PASS	AB=0.545;AC=13;AF=0.232;AN=56;BaseQRankSum=0.026;DP=1341;FS=3.268;HRun=0;HaplotypeScore=297.5554;InbreedingCoeff=0.9148;MQ=52.85;MQ0=14;MQRankSum=3.434;QD=26.28;ReadPosRankSum=4.244;VQSLOD=5.1602;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:63:99:0,104,1016	1/1:5,20:24:45.14:572,45,0	0/0:55,0:36:66.87:0,67,1149	0/0:48,0:34:35.71:0,36,708	0/0:10,0:31:56.87:0,57,480	0/0:43,0:43:99:0,99,1655	0/0:43,0:43:87.04:0,87,1437	0/0:47,0:47:97.02:0,97,1516	0/0:70,0:70:99:0,144,2347	0/0:66,0:66:99:0,142,2794	0/0:30,0:30:78.27:0,78,1297	0/0:65,2:67:89.20:0,89,2528	0/0:73,0:73:99:0,169,2781	0/0:53,0:53:91.94:0,92,2055	0/0:58,0:58:99:0,138,2227	0/0:79,0:79:99:0,181,2984	0/0:6,0:30:71.94:0,72,634	0/0:12,0:37:76.86:0,77,645	1/1:7,20:27:60.19:754,60,0	1/1:9,22:30:51.16:649,51,0	1/1:18,87:103:99:2596,204,0	0/0:45,0:45:99:0,123,2001	0/0:8,0:28:62.84:0,63,571	0/0:7,0:52:97.05:0,97,851	0/0:44,0:44:99:0,108,1790	1/1:2,41:41:99:1564,123,0	1/1:5,30:35:68.75:877,69,0	0/1:1,5:6:7.76:138,0,8
chr10	69860185	.	C	CA	1235.80	PASS	AB=0.792;AC=12;AF=0.214;AN=56;BaseQRankSum=4.952;DP=831;FS=6.657;HRun=1;HaplotypeScore=324.5631;InbreedingCoeff=0.3480;MQ=45.09;MQ0=0;MQRankSum=-2.628;QD=6.27;ReadPosRankSum=4.222;VQSLOD=0.5077;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:40.46:0,40,247	1/1:7,10:17:4.25:100,4,0	0/1:21,0:15:2.68:3,0,204	0/0:30,0:24:49.81:0,50,241	0/0:19,0:19:28.94:0,29,177	0/0:29,0:29:44.01:0,44,288	0/0:28,0:28:60.90:0,61,358	0/0:35,0:35:96.30:0,96,502	0/0:41,0:41:73.51:0,74,461	0/0:56,0:56:99:0,143,762	0/0:22,0:22:26.85:0,27,153	0/0:48,0:48:72.66:0,73,437	0/0:55,0:55:95.93:0,96,599	0/0:54,0:54:99:0,105,643	0/0:49,0:49:87.24:0,87,530	0/0:38,0:38:73.53:0,74,475	0/1:8,0:8:5.64:6,0,78	0/0:8,0:8:23.27:0,23,136	0/1:7,4:11:37.79:98,0,38	0/1:14,15:29:24.37:163,0,24	1/1:12,17:29:11.93:266,12,0	0/0:39,0:39:70.18:0,70,447	0/0:24,0:24:26.20:0,26,159	0/0:17,0:17:23.19:0,23,133	0/0:22,0:22:42.16:0,42,222	0/1:18,21:39:99:420,0,133	0/1:16,11:25:69.65:136,0,70	1/1:8,8:16:16.56:200,17,0
chr10	69860186	.	C	CA	1340.85	PASS	AB=0.797;AC=12;AF=0.214;AN=56;BaseQRankSum=1.826;DP=849;FS=7.880;HRun=0;HaplotypeScore=326.5232;InbreedingCoeff=0.3322;MQ=45.02;MQ0=1;MQRankSum=-1.510;QD=5.61;ReadPosRankSum=0.443;VQSLOD=2.1536;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:13.69:0,14,191	1/1:7,10:17:4.30:100,4,0	0/0:21,0:16:29.82:0,30,252	0/0:31,0:24:26.67:0,27,178	0/0:19,0:19:10.04:0,10,155	0/0:29,0:29:27.08:0,27,269	0/0:29,0:29:60.90:0,61,356	0/0:36,0:36:93.35:0,93,487	0/0:41,0:41:56.58:0,57,441	0/0:56,0:56:32.75:0,33,589	0/0:23,0:23:26.85:0,27,153	0/1:48,0:48:40.66:41,0,336	0/0:55,0:55:72.54:0,73,547	0/0:55,0:55:99:0,103,625	0/0:50,0:50:62.51:0,63,492	0/0:40,0:40:68.10:0,68,444	0/0:8,0:8:6.65:0,7,86	0/0:8,0:8:20.81:0,21,122	0/1:8,4:11:34.77:120,0,35	0/1:14,15:29:10.74:188,0,11	1/1:15,17:32:11.79:266,12,0	0/0:39,0:39:70.18:0,70,447	0/0:24,0:24:26.20:0,26,159	0/1:17,0:17:0.55:1,0,96	0/0:23,0:23:42.16:0,42,222	0/1:20,21:41:99:443,0,106	0/1:16,11:25:50.07:138,0,50	1/1:8,8:16:16.61:200,17,0
chr10	69860376	.	TCA	T	1287.38	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.909;DP=1248;FS=1.357;HRun=0;HaplotypeScore=178.1583;InbreedingCoeff=0.9999;MQ=60.44;MQ0=1;MQRankSum=1.212;QD=33.01;ReadPosRankSum=-4.385;VQSLOD=3.6173;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,162,2760	0/0:26,0:26:72.25:0,72,1230	0/0:37,0:34:62.28:0,62,995	0/0:62,0:56:99:0,129,1972	0/0:30,0:30:63.16:0,63,1020	0/0:20,0:21:48.14:0,48,827	0/0:36,0:36:81.26:0,81,1371	1/1:4,35:39:99:1382,105,0	0/0:57,0:57:99:0,150,2568	0/0:68,0:68:99:0,190,3207	0/0:22,0:22:48.16:0,48,829	0/0:59,0:59:99:0,163,2768	0/0:66,0:66:99:0,187,3212	0/0:69,0:69:99:0,181,3035	0/0:77,0:77:99:0,201,3442	0/0:53,0:53:99:0,153,2608	0/0:36,0:36:93.32:0,93,1585	0/0:24,0:24:63.69:0,64,1087	0/0:23,0:23:57.18:0,57,954	0/0:35,0:35:96.27:0,96,1600	0/0:79,0:79:99:0,208,3479	0/0:32,0:32:69.24:0,69,1189	0/0:34,0:34:75.26:0,75,1289	0/0:70,0:70:99:0,198,3286	0/0:42,0:42:99:0,102,1729	0/0:42,0:42:99:0,117,2014	0/0:38,0:37:99:0,105,1673	0/0:13,0:13:39.13:0,39,659
chr10	69860599	.	T	TAC	5521.11	PASS	AB=0.672;AC=11;AF=0.196;AN=56;BaseQRankSum=-12.090;DP=1031;FS=0.000;HRun=0;HaplotypeScore=132.9414;InbreedingCoeff=0.4829;MQ=57.93;MQ0=8;MQRankSum=0.558;QD=18.78;ReadPosRankSum=0.452;VQSLOD=4.6566;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:98.43:0,98,1096	0/1:5,15:19:5.85:402,0,6	0/0:35,0:14:23.27:0,23,242	0/1:43,0:33:0.96:1,0,475	0/0:26,0:26:50.87:0,51,589	0/0:20,0:20:35.21:0,35,421	0/0:40,0:42:89.92:0,90,1027	0/0:33,0:33:48.51:0,49,561	0/0:43,0:43:81.25:0,81,974	0/0:41,0:41:48.26:0,48,954	0/0:21,0:23:52.86:0,53,576	0/0:49,0:51:99:0,117,1382	0/0:44,0:47:99:0,117,1320	0/0:51,0:51:99:0,120,1409	0/0:38,0:38:75.23:0,75,904	0/0:47,0:47:96.28:0,96,1144	0/0:38,1:39:40.08:0,40,1028	0/0:29,0:29:56.65:0,57,640	1/1:7,15:21:9.10:587,9,0	1/1:8,26:34:27.12:923,27,0	0/1:23,57:82:71.83:1527,0,72	0/0:29,0:29:66.73:0,67,745	0/0:26,0:27:30.47:0,30,665	0/0:36,0:36:75.23:0,75,900	0/0:29,0:29:63.19:0,63,756	1/1:18,33:50:8.98:1235,9,0	0/1:12,18:28:19.79:626,0,20	0/1:3,8:10:9.27:220,0,9
chr10	69860919	.	GGTGT	G	1222.98	PASS	AB=0.885;AC=16;AF=0.308;AN=52;BaseQRankSum=2.491;DP=573;FS=2.376;HRun=0;HaplotypeScore=102.4424;InbreedingCoeff=0.2993;MQ=65.45;MQ0=22;MQRankSum=0.203;QD=5.82;ReadPosRankSum=2.653;VQSLOD=1.5941;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:30.10:0,30,604	1/1:7,0:12:12.01:112,12,0	./.	./.	0/0:22,0:23:30.09:0,30,612	0/1:22,2:27:82.29:82,0,322	0/0:18,0:18:18.05:0,18,355	0/0:16,0:16:8.97:0,9,81	0/1:9,0:12:0.75:1,0,181	0/1:14,1:15:37.37:37,0,129	0/0:14,0:19:8.76:0,9,126	0/0:16,0:16:2.74:0,3,327	0/0:15,0:17:8.77:0,9,151	0/0:16,0:16:23.91:0,24,465	0/1:20,1:20:19.83:20,0,392	0/0:23,0:22:27.09:0,27,598	1/1:15,6:23:2.10:266,2,0	1/1:17,6:22:6.02:93,6,0	0/1:20,2:22:60.34:83,0,60	0/0:8,0:11:5.49:0,5,24	0/0:27,0:29:8.50:0,8,72	0/0:11,4:15:5.65:0,6,28	1/1:14,5:19:12.04:185,12,0	1/1:7,10:19:14.51:359,15,0	0/0:22,0:21:27.09:0,27,599	0/0:17,0:17:8.69:0,9,57	0/0:13,0:16:5.49:0,5,24	0/1:12,1:14:22.17:147,0,22
chr10	69862872	.	CGTGT	C	791.48	PASS	AB=0.796;AC=14;AF=0.350;AN=40;BaseQRankSum=1.428;DP=615;FS=4.453;HRun=0;HaplotypeScore=102.5904;InbreedingCoeff=0.5645;MQ=69.26;MQ0=14;MQRankSum=0.128;QD=4.12;ReadPosRankSum=2.472;VQSLOD=1.5232;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:1.09:0,1,367	./.	./.	./.	./.	0/0:12,0:12:11.83:0,12,194	0/0:29,0:30:14.74:0,15,221	./.	0/0:29,0:28:17.77:0,18,264	0/0:19,0:19:8.98:0,9,110	0/0:8,0:15:7.08:0,7,64	0/0:26,0:24:9.02:0,9,161	0/0:23,0:23:21.05:0,21,380	0/0:22,0:21:11.94:0,12,130	0/1:13,0:18:12.91:59,0,13	0/0:24,0:26:8.49:0,8,49	1/1:29,1:30:23.99:277,24,0	1/1:28,1:28:9.41:105,9,0	0/0:16,0:16:1.25:0,1,3	1/1:10,0:9:3:28,3,0	./.	0/0:16,0:16:15.85:0,16,389	./.	1/1:39,7:46:18.05:258,18,0	0/1:13,1:17:10.11:38,0,10	1/1:16,0:17:6:55,6,0	1/1:18,4:23:9.02:120,9,0	./.
chr10	69863226	.	G	GCA	1679.07	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.557;DP=698;FS=0.638;HRun=0;HaplotypeScore=92.3166;InbreedingCoeff=0.9838;MQ=88.63;MQ0=1;MQRankSum=-1.167;QD=45.38;ReadPosRankSum=-5.920;VQSLOD=2.9290;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1396	0/0:5,0:5:15.05:0,15,221	0/0:20,0:20:60.08:0,60,774	0/0:32,0:32:84.20:0,84,1160	0/0:15,0:15:36.12:0,36,530	0/0:29,0:29:87.25:0,87,1221	0/0:30,0:30:84.20:0,84,1135	1/1:2,35:37:99:1774,105,0	0/0:18,0:18:48.13:0,48,665	0/0:34,0:34:99:0,102,1471	0/0:14,0:14:39.12:0,39,555	0/0:26,0:26:78.25:0,78,1128	0/0:31,0:31:90.26:0,90,1265	0/0:32,0:32:93.22:0,93,1234	0/0:23,0:23:66.19:0,66,932	0/0:20,0:20:57.19:0,57,839	0/0:26,0:26:75.18:0,75,1039	0/0:21,0:21:60.18:0,60,861	0/0:30,0:30:90.24:0,90,1217	0/0:12,0:12:30.09:0,30,422	0/0:25,0:24:54.12:0,54,716	0/0:16,0:16:42.13:0,42,599	0/0:28,0:28:84.24:0,84,1177	0/0:20,0:20:60.17:0,60,841	0/0:29,0:29:84.27:0,84,1217	0/0:39,0:39:99:0,114,1645	0/0:37,0:37:99:0,105,1496	0/0:14,0:14:42.14:0,42,618
chr10	69864135	.	G	GGTGTGT	7863.82	PASS	AB=0.561;AC=27;AF=0.482;AN=56;BaseQRankSum=4.405;DP=643;FS=1.891;HRun=0;HaplotypeScore=166.5436;InbreedingCoeff=0.9146;MQ=69.53;MQ0=7;MQRankSum=-6.582;QD=25.78;ReadPosRankSum=-3.052;VQSLOD=4.3987;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,19:29:20.23:322,20,0	1/1:14,0:14:24.49:375,24,0	0/0:35,0:23:62.79:0,63,1087	0/0:29,0:20:45.87:0,46,745	1/1:9,14:24:41.46:868,41,0	0/0:18,0:17:51.12:0,51,994	0/0:21,0:21:45.15:0,45,975	1/1:16,0:16:13.68:108,14,0	0/0:22,0:22:63.21:0,63,1306	0/0:27,0:27:76.44:0,76,1533	0/0:20,0:20:51.17:0,51,1078	0/0:24,0:24:61.72:0,62,1362	0/0:16,0:16:42.12:0,42,799	0/0:27,0:27:66.20:0,66,1374	0/0:29,0:29:81.25:0,81,1726	0/0:20,0:20:54.17:0,54,1100	1/1:26,6:30:72.20:1571,72,0	0/1:7,25:32:3.62:258,0,4	1/1:7,16:21:45.04:804,45,0	1/1:12,16:29:54.10:1059,54,0	1/1:7,9:17:8.98:170,9,0	0/0:24,0:24:68.94:0,69,1329	1/1:9,13:21:15.90:296,16,0	1/1:14,2:15:11.35:323,11,0	0/0:26,0:26:62.75:0,63,1173	1/1:2,18:19:48.15:1148,48,0	1/1:6,17:25:14.27:385,14,0	1/1:5,1:6:6.02:177,6,0
chr10	69864150	.	TTG	T	143.47	PASS	AB=0.946;AC=17;AF=0.327;AN=52;BaseQRankSum=2.192;DP=652;FS=6.791;HRun=0;HaplotypeScore=144.6869;InbreedingCoeff=-0.3496;MQ=59.71;MQ0=13;MQRankSum=0.269;QD=0.38;ReadPosRankSum=-1.204;VQSLOD=2.1419;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:2.52:0,3,24	0/0:17,0:17:11.58:0,12,149	./.	./.	0/1:20,0:22:13.05:13,0,79	0/1:21,3:23:11.85:12,0,208	0/1:19,3:22:9:9,0,213	0/0:16,0:16:7.51:0,8,48	0/0:22,0:23:14.77:0,15,307	0/1:29,0:29:18.49:18,0,245	0/0:22,0:21:8.19:0,8,147	0/1:23,3:26:38.94:39,0,188	0/1:13,2:15:23.90:24,0,81	0/1:23,2:25:5.85:6,0,321	0/1:33,1:34:7.40:7,0,414	0/1:20,1:22:22.52:23,0,245	0/0:32,0:32:15.18:0,15,126	0/1:26,0:26:11.74:12,0,87	0/0:21,0:18:3.95:0,4,38	0/1:25,0:25:8.53:9,0,72	0/1:21,0:21:1.44:1,0,20	0/1:21,1:22:2.90:3,0,335	1/1:19,0:19:3.84:51,4,0	0/1:20,0:20:10.59:11,0,16	0/1:18,3:21:44.85:45,0,165	0/0:28,0:27:22.54:0,23,211	0/0:23,0:23:2.85:0,3,64	0/0:7,0:6:2.99:0,3,23
chr10	69864556	.	TC	T	1228.83	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.137;DP=706;FS=7.695;HRun=2;HaplotypeScore=74.8916;InbreedingCoeff=0.9968;MQ=80.69;MQ0=0;MQRankSum=-1.569;QD=35.11;ReadPosRankSum=-5.060;VQSLOD=1.3924;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,163,2385	0/0:8,0:8:24.08:0,24,359	0/0:14,0:14:39.96:0,40,538	0/0:24,0:24:56.26:0,56,724	0/0:24,0:24:72.21:0,72,1037	0/0:17,0:17:51.17:0,51,764	0/0:31,0:31:80.96:0,81,1295	1/1:1,34:35:99:1324,102,0	0/0:32,0:32:93.29:0,93,1355	0/0:19,0:19:51.14:0,51,740	0/0:19,0:19:54.16:0,54,773	0/0:29,0:29:84.28:0,84,1256	0/0:23,0:23:69.23:0,69,1032	0/0:25,0:25:72.24:0,72,1079	0/0:38,0:38:99:0,114,1685	0/0:21,0:21:63.20:0,63,925	0/0:18,0:18:54.18:0,54,809	0/0:17,0:17:51.17:0,51,764	0/0:23,0:23:60.12:0,60,812	0/0:24,0:24:66.20:0,66,948	0/0:53,0:53:99:0,154,2271	0/0:28,0:28:81.27:0,81,1214	0/0:17,0:17:51.16:0,51,743	0/0:34,0:34:99:0,102,1511	0/0:13,0:13:39.13:0,39,584	0/0:27,0:28:81.25:0,81,1160	0/0:27,0:27:81.26:0,81,1194	0/0:10,0:10:27.09:0,27,405
chr10	69865472	.	CGTGTGTGTGTGTGTGTGTGTGT	C	2024.02	PASS	AB=0.731;AC=11;AF=0.204;AN=54;BaseQRankSum=5.309;DP=534;FS=0.000;HRun=0;HaplotypeScore=265.6704;InbreedingCoeff=0.6735;MQ=49.49;MQ0=10;MQRankSum=-3.752;QD=16.59;ReadPosRankSum=1.334;VQSLOD=1.6013;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,12:23:3.01:176,3,0	0/0:3,0:6:6.02:0,6,150	./.	0/0:25,0:4:9.50:0,10,526	1/1:8,24:32:14.75:407,15,0	0/0:13,0:17:34.64:0,35,2049	0/0:14,0:15:29.31:0,29,1749	0/0:32,0:39:70.47:0,70,1835	0/0:15,0:17:36.12:0,36,3005	0/0:15,0:16:36.12:0,36,2913	0/0:18,0:18:33.11:0,33,2832	0/0:19,0:18:42.14:0,42,3296	0/0:9,0:10:17.71:0,18,504	0/0:20,0:19:42.14:0,42,2910	0/0:18,0:18:30.10:0,30,2168	0/0:19,0:20:33.57:0,34,2439	1/1:9,10:19:17.45:901,17,0	0/1:12,6:19:55.10:339,0,55	0/0:18,0:21:38.34:0,38,1071	0/0:11,0:15:18.53:0,19,659	0/0:16,0:19:7.43:0,7,194	0/0:14,0:14:30.10:0,30,2375	1/1:8,7:16:2.31:175,2,0	1/1:7,5:12:3.01:176,3,0	0/0:22,0:23:33.11:0,33,2926	0/0:15,0:23:57.18:0,57,1937	0/0:14,0:28:21.68:0,22,1324	0/0:3,0:3:6.02:0,6,148
chr10	69871139	.	T	TCA	1002.44	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.589;DP=727;FS=1.647;HRun=0;HaplotypeScore=92.8100;InbreedingCoeff=0.9970;MQ=67.49;MQ0=2;MQRankSum=0.645;QD=27.85;ReadPosRankSum=-4.173;VQSLOD=3.6647;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,102,1245	0/0:9,0:9:24.08:0,24,303	0/0:34,0:33:37.05:0,37,492	0/0:33,0:31:53.15:0,53,694	0/0:32,0:32:75.22:0,75,932	0/0:32,0:32:87.08:0,87,1047	0/0:24,0:24:42.12:0,42,518	1/1:13,23:35:66.23:1097,66,0	0/0:22,0:22:54.13:0,54,633	0/0:30,0:30:78.23:0,78,960	0/0:16,0:16:45.14:0,45,567	0/0:31,0:31:75.21:0,75,910	0/0:27,0:27:57.14:0,57,698	0/0:24,0:24:60.19:0,60,757	0/0:28,0:28:72.20:0,72,862	0/0:17,0:17:42.13:0,42,530	0/0:35,0:35:87.16:0,87,1117	0/0:22,0:23:50.99:0,51,619	0/0:19,0:19:30.10:0,30,379	0/0:27,0:27:66.20:0,66,820	0/0:22,0:22:63.18:0,63,779	0/0:24,0:24:66.19:0,66,808	0/0:22,0:22:63.18:0,63,771	0/0:26,0:26:63.11:0,63,766	0/0:20,0:20:54.15:0,54,659	0/0:23,0:24:69.03:0,69,816	0/0:32,0:32:75.21:0,75,920	0/0:17,0:17:33.05:0,33,373
chr10	69873454	.	G	GCTAT	2799.89	PASS	AC=16;AF=0.308;AN=52;BaseQRankSum=-1.341;DP=712;FS=3.484;HRun=0;HaplotypeScore=125.9863;InbreedingCoeff=0.9164;MQ=63.85;MQ0=4;MQRankSum=-1.010;QD=14.58;ReadPosRankSum=-2.113;VQSLOD=3.2226;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:41:0.89:0,1,2	1/1:10,4:14:21.07:490,21,0	./.	./.	1/1:14,8:22:33.11:770,33,0	0/0:27,0:27:42.13:0,42,617	0/0:21,0:21:27.09:0,27,414	1/1:46,0:46:25.14:222,25,0	1/1:18,10:29:24.08:560,24,0	0/0:42,0:42:51.16:0,51,746	0/0:21,0:21:27.09:0,27,413	0/0:28,0:28:36.10:0,36,524	0/0:30,0:30:36.09:0,36,508	0/0:25,0:25:33.11:0,33,506	0/0:25,0:25:45.15:0,45,676	0/0:19,0:20:36.12:0,36,530	0/0:27,0:27:14.54:0,15,384	1/1:20,0:21:14.50:273,15,0	0/0:18,0:18:15.05:0,15,223	0/0:20,0:20:33.10:0,33,479	0/0:34,0:34:33.11:0,33,505	1/1:13,11:24:21.07:490,21,0	1/1:16,0:18:9.90:117,10,0	1/1:15,0:18:3.01:70,3,0	0/0:28,0:28:33.11:0,33,506	0/0:33,0:33:48.15:0,48,716	0/0:27,0:27:42.14:0,42,637	0/0:11,0:9:12.04:0,12,184
chr10	69873610	.	TCTATCTATCTAC	T	4641.04	PASS	AB=0.923;AC=20;AF=0.357;AN=56;BaseQRankSum=12.751;DP=623;FS=2.617;HRun=0;HaplotypeScore=231.5217;InbreedingCoeff=0.4938;MQ=53.50;MQ0=8;MQRankSum=-2.318;QD=17.85;ReadPosRankSum=-2.319;VQSLOD=3.8079;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:22.95:214,23,0	0/0:13,0:13:5.06:0,5,980	0/0:16,0:6:1.99:0,2,30	0/1:10,0:3:4.65:5,0,76	1/1:27,0:27:22.83:457,23,0	0/0:20,0:19:45.10:0,45,1701	0/0:14,0:14:33.96:0,34,1153	0/0:35,0:29:75.06:0,75,1590	0/0:22,0:22:45.12:0,45,2012	0/0:29,0:27:75.22:0,75,2841	0/0:29,0:29:72.15:0,72,2578	0/0:28,0:28:78.25:0,78,3466	0/0:27,0:27:78.25:0,78,3706	0/0:23,0:23:57.15:0,57,2443	0/0:25,0:25:66.18:0,66,2278	0/0:24,0:24:69.18:0,69,2807	0/1:25,0:25:12.89:55,0,13	0/1:20,0:20:68.91:98,0,69	1/1:5,10:12:29.87:615,30,0	1/1:3,30:33:31.57:811,32,0	1/1:14,0:14:2.15:105,2,0	0/0:29,0:29:75.20:0,75,2743	1/1:23,0:23:1.27:9,1,0	0/1:11,0:11:0.43:1,0,0	0/0:29,0:29:81.24:0,81,3408	0/1:4,23:27:99:1202,0,108	1/1:1,30:31:29.89:1055,30,0	0/1:4,0:3:13.51:14,0,65
chr10	69873614	.	TCTATCTAC	T	3537.12	PASS	AB=0.910;AC=23;AF=0.411;AN=56;BaseQRankSum=13.505;DP=608;FS=0.849;HRun=0;HaplotypeScore=191.7897;InbreedingCoeff=0.6214;MQ=53.70;MQ0=8;MQRankSum=-3.230;QD=13.35;ReadPosRankSum=-3.163;VQSLOD=2.4420;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:22.18:189,22,0	0/1:13,0:13:17:17,0,628	0/0:13,0:4:1.99:0,2,30	0/1:10,0:3:4.65:5,0,53	1/1:27,0:27:32.56:401,33,0	0/0:19,0:18:45.09:0,45,1225	0/0:14,0:14:17.23:0,17,809	0/0:36,0:30:80.89:0,81,1314	0/0:20,0:20:45.10:0,45,1468	0/0:31,0:29:84.20:0,84,2129	0/0:28,0:28:75.12:0,75,1918	0/0:29,0:29:81.23:0,81,2493	0/0:29,0:29:84.23:0,84,2725	0/0:21,0:21:57.12:0,57,1751	0/0:23,0:23:66.17:0,66,1603	0/0:23,0:23:69.16:0,69,2059	1/1:17,5:22:26.34:301,26,0	1/1:19,0:19:18.25:389,18,0	1/1:12,0:10:29.83:349,30,0	1/1:33,0:33:32.03:436,32,0	1/1:13,0:13:5.57:85,6,0	0/0:29,0:29:78.18:0,78,2042	1/1:0,23:23:1.93:80,2,0	0/1:2,9:11:0.32:0,0,0	0/0:28,0:28:84.21:0,84,2535	0/1:25,0:25:64.26:631,0,64	1/1:31,0:31:30:579,30,0	0/1:6,0:5:16.77:74,0,17
chr10	69873621	.	ACC	A	97	PASS	AB=0.934;AC=8;AF=0.143;AN=56;BaseQRankSum=9.458;DP=600;FS=0.000;HRun=2;HaplotypeScore=143.4787;InbreedingCoeff=0.3217;MQ=54.05;MQ0=6;MQRankSum=-6.007;QD=0.66;ReadPosRankSum=4.686;VQSLOD=-0.5352;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,2:21:4.27:0,4,133	0/0:12,0:12:23.76:0,24,274	0/0:10,0:5:11.40:0,11,161	0/0:10,0:4:12.03:0,12,181	0/1:18,10:28:6.45:6,0,115	0/0:18,0:17:54.19:0,54,1079	0/0:15,0:15:45.11:0,45,868	0/0:34,0:30:90.31:0,90,1773	0/0:17,0:17:51.17:0,51,1014	0/0:32,0:30:96.33:0,96,1942	0/0:27,0:27:81.28:0,81,1635	0/0:27,0:27:81.28:0,81,1639	0/0:33,0:33:99:0,99,2001	0/0:21,0:21:60.16:0,60,1174	0/0:22,0:22:66.21:0,66,1300	0/0:24,0:24:72.23:0,72,1413	0/0:22,0:22:29.41:0,29,220	0/0:18,0:18:17.88:0,18,233	0/1:11,0:10:15.50:16,0,92	0/1:30,0:30:37.42:37,0,77	0/0:10,0:10:5.69:0,6,32	0/0:33,0:33:99:0,99,1915	1/1:23,0:23:2.66:14,3,0	0/0:10,0:10:0:0,0,1	0/0:30,0:30:90.30:0,90,1792	0/1:24,0:24:40.74:41,0,275	1/1:30,0:30:26.18:115,26,0	0/0:8,0:7:20.73:0,21,152
chr10	69873624	.	TATCTATCTATCTAC	T	986.33	PASS	AB=0.947;AC=9;AF=0.161;AN=56;BaseQRankSum=9.965;DP=607;FS=2.977;HRun=0;HaplotypeScore=258.8926;InbreedingCoeff=0.3379;MQ=55.16;MQ0=6;MQRankSum=-4.899;QD=6.28;ReadPosRankSum=4.138;VQSLOD=2.5414;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,2:19:17.06:204,17,0	0/0:11,0:11:33.10:0,33,1671	0/0:8,0:3:9.03:0,9,180	0/0:9,0:3:9.03:0,9,216	0/1:18,10:28:3.18:426,0,3	0/0:17,0:16:51.16:0,51,2507	0/0:15,0:15:45.13:0,45,1660	0/0:33,0:29:84.76:0,85,2701	0/0:19,0:19:57.19:0,57,2768	0/0:33,0:31:99:0,99,4388	0/0:30,0:30:90.31:0,90,4047	0/0:27,0:27:81.28:0,81,4649	0/0:34,0:34:99:0,102,5063	0/0:21,0:21:60.21:0,60,3337	0/0:22,0:22:66.23:0,66,3192	0/0:23,0:23:69.22:0,69,3937	0/0:23,0:23:39.91:0,40,589	0/0:19,0:19:50.54:0,51,713	0/1:12,0:11:52.08:52,0,127	0/1:31,0:31:99:119,0,150	0/1:11,0:11:11.23:11,0,31	0/0:31,0:31:93.29:0,93,3966	0/0:24,0:24:4.93:0,5,92	0/0:12,0:12:2.20:0,2,44	0/0:31,0:31:93.32:0,93,4926	0/1:26,0:26:61.03:61,0,579	1/1:30,0:30:29.75:263,30,0	0/0:8,0:7:20.88:0,21,284
chr10	69875525	.	AT	A	3603.98	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.107;DP=534;FS=4.037;HRun=7;HaplotypeScore=66.4404;InbreedingCoeff=0.9636;MQ=71.87;MQ0=0;MQRankSum=-1.168;QD=28.83;ReadPosRankSum=-0.052;VQSLOD=4.2468;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.26:0,81,1018	1/1:1,8:9:24.05:245,24,0	0/0:12,0:12:15:0,15,162	0/0:5,0:5:3.59:0,4,39	0/0:26,0:26:75.22:0,75,919	0/0:21,0:21:54.17:0,54,679	0/0:25,0:25:72.22:0,72,895	0/0:27,0:27:72.19:0,72,878	0/0:18,0:18:51.15:0,51,626	0/0:27,0:27:81.25:0,81,1006	0/0:24,0:24:66.20:0,66,817	0/0:22,0:22:60.19:0,60,755	0/0:19,0:19:51.16:0,51,642	0/0:21,0:22:66.07:0,66,794	0/0:14,0:14:39.12:0,39,491	0/0:10,0:10:30.10:0,30,377	0/0:22,0:22:60.13:0,60,710	0/0:12,0:12:33.11:0,33,415	1/1:1,20:21:60.12:605,60,0	1/1:1,29:30:87.20:887,87,0	1/1:0,6:6:18.04:184,18,0	0/0:27,0:27:78.25:0,78,981	0/0:20,0:20:54.16:0,54,668	0/0:10,0:10:30.10:0,30,377	0/0:17,0:17:51.15:0,51,630	1/1:1,27:28:81.18:826,81,0	1/1:1,25:26:69.13:704,69,0	1/1:0,5:5:15.03:153,15,0
chr10	69875928	.	ATG	A	3130.61	PASS	AB=0.892;AC=30;AF=0.556;AN=54;BaseQRankSum=9.753;DP=714;FS=7.026;HRun=0;HaplotypeScore=112.1709;InbreedingCoeff=0.5548;MQ=65.25;MQ0=8;MQRankSum=-1.810;QD=6.78;ReadPosRankSum=0.246;VQSLOD=2.9020;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,15:39:41.52:410,42,0	1/1:3,0:12:19.89:98,20,0	./.	0/0:27,0:19:5.97:0,6,65	1/1:8,17:25:32.92:346,33,0	0/1:25,4:29:83.46:83,0,471	0/1:31,1:32:0.94:1,0,371	1/1:23,0:31:19.66:93,20,0	0/0:21,0:21:36.03:0,36,472	0/1:20,3:24:22.22:22,0,466	0/0:20,0:20:37.67:0,38,514	0/0:24,1:25:11.47:0,11,552	0/0:18,0:18:27.01:0,27,339	0/1:27,3:30:31.19:31,0,400	0/0:19,1:39:14.37:0,14,413	0/0:23,0:23:48.16:0,48,711	1/1:15,0:24:12.70:68,13,0	1/1:7,0:13:6.93:31,7,0	1/1:11,9:19:18.03:192,18,0	1/1:11,21:33:56.83:596,57,0	0/1:25,18:43:62.50:359,0,63	0/0:25,0:25:41.91:0,42,574	1/1:12,0:26:25.10:120,25,0	1/1:10,0:14:3.22:15,3,0	0/0:22,2:24:17.51:0,18,651	1/1:13,17:31:44.82:463,45,0	1/1:12,15:27:33.09:370,33,0	0/1:6,0:6:0.02:29,0,0
chr10	69876335	.	AT	A	476.97	PASS	AB=0.977;AC=4;AF=0.071;AN=56;BaseQRankSum=6.064;DP=600;FS=0.000;HRun=10;HaplotypeScore=63.0404;InbreedingCoeff=0.4270;MQ=72.72;MQ0=0;MQRankSum=-0.260;QD=8.08;ReadPosRankSum=-4.172;VQSLOD=0.8662;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.13:0,48,531	0/0:13,0:13:33.09:0,33,365	0/1:20,1:15:7.15:7,0,153	0/1:11,0:10:2.23:2,0,21	0/0:28,0:28:63.17:0,63,695	0/0:31,0:31:75.20:0,75,828	0/0:14,0:14:42.11:0,42,465	1/1:5,22:27:65.97:569,66,0	0/0:24,1:26:51.91:0,52,758	0/0:49,0:49:99:0,117,1284	0/0:19,0:19:57.15:0,57,630	0/0:15,0:15:42.08:0,42,447	0/0:32,0:32:87.21:0,87,950	0/0:24,0:24:66.17:0,66,722	0/0:28,0:28:72.19:0,72,789	0/0:25,1:27:39.96:0,40,652	0/0:14,0:14:42.08:0,42,452	0/0:5,0:5:15.04:0,15,166	0/0:12,1:13:3.96:0,4,257	0/0:36,0:36:96.25:0,96,1055	0/0:13,0:13:27.04:0,27,281	0/0:17,0:18:50.97:0,51,545	0/0:25,1:26:43.13:0,43,703	0/0:15,0:15:42.01:0,42,447	0/0:15,1:16:4.11:0,4,273	0/0:35,0:35:64.19:0,64,936	0/0:22,0:23:53.98:0,54,578	0/0:4,0:4:6.02:0,6,66
chr10	69876565	.	AT	A	1500.73	PASS	AB=0.927;AC=21;AF=0.375;AN=56;BaseQRankSum=6.869;DP=529;FS=17.700;HRun=3;HaplotypeScore=75.9236;InbreedingCoeff=0.6730;MQ=78.10;MQ0=2;MQRankSum=-0.731;QD=6.95;ReadPosRankSum=-0.740;VQSLOD=-0.5216;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:31.80:190,32,0	1/1:9,0:9:17.69:109,18,0	0/0:27,0:19:9.99:0,10,274	0/0:18,2:16:17.46:0,17,107	1/1:20,1:21:34.81:262,35,0	0/0:23,0:23:56.50:0,56,744	0/0:23,0:23:66.41:0,66,786	0/0:37,0:37:94.82:0,95,884	0/0:18,0:18:42.06:0,42,515	0/0:24,0:24:68.14:0,68,760	0/0:21,0:21:42.28:0,42,503	0/0:11,0:11:30.07:0,30,377	0/0:18,0:18:48.08:0,48,593	0/0:17,0:17:48.11:0,48,613	0/0:24,0:24:68.11:0,68,855	0/0:12,0:12:33.11:0,33,471	0/1:23,3:26:3.64:221,0,4	0/1:12,2:14:0.75:118,0,1	1/1:15,0:15:17.59:151,18,0	1/1:18,0:18:26.77:126,27,0	1/1:10,0:10:5.70:31,6,0	0/0:20,0:20:53.18:0,53,697	0/1:16,1:17:4.33:70,0,4	0/1:21,2:23:12.05:123,0,12	0/0:17,0:17:49:0,49,592	0/1:14,0:14:8.68:165,0,9	1/1:10,0:10:19.11:106,19,0	1/1:10,0:10:6.21:29,6,0
chr10	69876567	.	T	TAA	1448	PASS	AB=0.650;AC=15;AF=0.268;AN=56;BaseQRankSum=8.359;DP=563;FS=7.302;HRun=0;HaplotypeScore=102.4536;InbreedingCoeff=0.6330;MQ=78.26;MQ0=2;MQRankSum=0.931;QD=8.00;ReadPosRankSum=-2.658;VQSLOD=1.9831;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:30:50.46:50,0,74	1/1:6,0:11:15.54:79,16,0	0/0:30,0:21:39.12:0,39,505	0/0:20,0:16:17.27:0,17,241	1/1:20,0:26:9.14:166,9,0	0/0:22,0:22:60.19:0,60,937	0/0:24,0:24:69.22:0,69,1072	0/0:39,0:39:72.67:0,73,1184	0/0:16,0:16:42.12:0,42,617	0/0:26,0:26:75.23:0,75,1120	0/0:18,0:18:54.18:0,54,856	0/0:12,0:12:33.10:0,33,510	0/0:18,0:18:51.17:0,51,798	0/0:16,0:16:48.13:0,48,730	0/0:25,0:25:72.23:0,72,1128	0/0:12,0:12:33.03:0,33,538	0/0:27,0:27:55.13:0,55,351	0/1:17,0:17:4.14:4,0,153	1/1:5,5:14:26.54:271,27,0	1/1:3,18:25:44.61:424,45,0	0/1:1,11:14:8.34:76,0,8	0/0:19,0:19:57.19:0,57,904	0/0:18,0:18:30.47:0,30,230	0/0:22,0:23:19.86:0,20,317	0/0:17,0:17:51.17:0,51,791	0/1:4,10:19:5.45:330,0,5	1/1:2,12:16:12.62:193,13,0	0/1:2,5:9:0.11:35,0,0
chr10	69876568	.	T	TA	2083.08	PASS	AB=0.968;AC=23;AF=0.411;AN=56;BaseQRankSum=6.578;DP=569;FS=2.814;HRun=13;HaplotypeScore=92.7838;InbreedingCoeff=0.6071;MQ=76.81;MQ0=2;MQRankSum=-1.113;QD=7.39;ReadPosRankSum=-7.102;VQSLOD=0.8878;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:3.05:252,0,3	1/1:10,0:11:20.72:194,21,0	0/0:29,0:21:2.80:0,3,97	0/1:19,0:15:1.67:2,0,42	1/1:25,0:26:42.85:332,43,0	0/0:18,3:21:22.61:0,23,295	0/0:21,1:23:28.94:0,29,311	1/1:14,20:36:43.43:453,43,0	0/0:13,3:16:4.73:0,5,172	0/0:24,1:26:18.57:0,19,255	0/0:15,0:19:31.58:0,32,178	0/0:12,0:12:26.65:0,27,179	0/0:17,0:18:36.78:0,37,249	0/0:15,0:15:32.07:0,32,213	0/0:24,1:26:36.58:0,37,385	0/0:12,0:12:32.59:0,33,226	0/0:27,0:27:47.61:0,48,219	0/1:18,0:18:61.71:62,0,70	1/1:19,0:19:40.10:215,40,0	1/1:27,0:27:55.62:325,56,0	1/1:15,0:15:14.47:92,14,0	0/0:19,0:20:49.57:0,50,333	0/1:17,1:18:60.29:60,0,72	0/0:22,0:22:16.07:0,16,163	0/1:14,2:17:20.98:21,0,154	1/1:21,0:21:20.52:193,21,0	1/1:16,0:16:14.20:71,14,0	1/1:7,0:7:2.65:13,3,0
chr10	69878351	.	CCA	C	1315.55	PASS	AB=0.951;AC=22;AF=0.423;AN=52;BaseQRankSum=5.513;DP=708;FS=2.546;HRun=0;HaplotypeScore=123.0460;InbreedingCoeff=0.3095;MQ=66.30;MQ0=21;MQRankSum=0.041;QD=4.26;ReadPosRankSum=-1.305;VQSLOD=2.4847;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:6.65:0,7,85	1/1:8,0:10:13.60:59,14,0	./.	0/0:44,0:26:2.37:0,2,8	0/1:21,0:19:2.73:3,0,39	0/0:24,0:24:26.70:0,27,300	0/1:35,0:35:91.37:91,0,542	0/0:37,0:36:14.19:0,14,98	0/1:16,3:18:0.91:1,0,395	0/0:36,0:33:16.19:0,16,478	0/0:13,3:16:21.05:0,21,280	0/1:19,2:21:26.97:27,0,456	0/0:20,0:20:3.78:0,4,431	0/0:29,0:29:43.35:0,43,605	0/1:22,0:22:3.54:4,0,347	0/1:16,4:20:6.97:7,0,327	0/1:29,0:28:7.95:8,0,12	0/1:23,0:23:27.77:107,0,28	1/1:7,1:7:6.02:66,6,0	1/1:15,6:22:28.40:233,28,0	1/1:31,2:32:18.05:195,18,0	0/0:26,0:26:50.99:0,51,630	./.	0/0:41,0:41:2.87:0,3,22	0/0:20,1:21:2.03:0,2,396	1/1:19,7:26:25.10:368,25,0	1/1:10,7:19:25.42:283,25,0	1/1:1,0:1:3.01:33,3,0
chr10	69878384	.	TACACACAC	T	2753.87	PASS	AB=1.000;AC=18;AF=0.333;AN=54;BaseQRankSum=9.586;DP=780;FS=9.062;HRun=0;HaplotypeScore=204.2909;InbreedingCoeff=0.8002;MQ=51.76;MQ0=26;MQRankSum=-0.911;QD=10.28;ReadPosRankSum=0.045;VQSLOD=1.7776;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:91.66:92,0,236	1/1:12,0:14:16.36:135,16,0	0/0:18,0:3:7.50:0,7,45	./.	0/0:23,0:20:15.03:0,15,242	0/0:25,0:25:39.98:0,40,819	0/0:43,0:44:66.11:0,66,1483	0/0:41,0:37:63.05:0,63,526	0/0:31,0:31:62.94:0,63,1459	0/0:36,0:32:67.44:0,67,1188	0/0:17,0:16:25.71:0,26,666	0/0:26,0:26:54:0,54,1189	0/0:25,0:23:63.22:0,63,1475	0/0:32,0:31:66.22:0,66,1462	0/0:37,0:37:82.78:0,83,1683	0/0:27,0:28:66.05:0,66,1497	0/0:36,0:35:0.55:0,1,5	0/0:23,0:23:18.03:0,18,176	1/1:6,9:13:23.92:304,24,0	1/1:14,17:30:12.04:298,12,0	1/1:37,0:35:27.09:397,27,0	0/0:23,0:23:33.11:0,33,1054	0/1:36,0:34:0.11:0,0,0	1/1:36,0:36:0.78:2,1,0	0/0:28,0:28:51.24:0,51,1444	1/1:13,24:35:63.63:1051,64,0	1/1:9,15:22:17.65:389,18,0	1/1:9,0:8:18.06:273,18,0
chr10	69878392	.	C	CAT	1202.89	PASS	AB=0.940;AC=16;AF=0.286;AN=56;BaseQRankSum=12.267;DP=787;FS=8.957;HRun=0;HaplotypeScore=157.5372;InbreedingCoeff=0.2593;MQ=53.20;MQ0=24;MQRankSum=-1.246;QD=3.67;ReadPosRankSum=-0.329;VQSLOD=2.0508;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:26.46:209,0,26	0/0:13,0:13:1.29:0,1,92	0/0:19,0:5:10.76:0,11,63	0/0:21,0:6:9.02:0,9,101	0/1:11,12:22:51.13:95,0,51	0/0:27,0:27:51.30:0,51,578	0/0:39,0:39:77.59:0,78,1062	0/1:37,0:34:56.91:57,0,327	0/0:29,0:28:69.14:0,69,936	0/0:35,0:33:92.59:0,93,1024	0/0:19,0:18:35.88:0,36,382	0/0:28,0:28:61.85:0,62,718	0/0:27,0:25:52.26:0,52,824	0/0:32,0:31:81:0,81,970	0/0:40,0:40:99:0,103,1293	0/0:27,0:27:66.02:0,66,897	1/1:39,0:38:1.78:90,2,0	1/1:21,0:21:3.09:71,3,0	0/1:14,0:12:33.40:126,0,33	0/0:29,0:28:7.31:0,7,69	0/1:36,0:35:35.92:271,0,36	0/0:23,0:23:40.61:0,41,579	1/1:34,0:32:3.46:25,3,0	1/1:38,0:38:7.78:53,8,0	0/0:29,0:29:63.56:0,64,764	0/1:38,0:36:99:214,0,159	0/0:22,0:20:9.72:0,10,76	1/1:11,0:10:5.03:150,5,0
chr10	69878410	.	C	CAT	4819.33	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=3.153;DP=755;FS=7.563;HRun=0;HaplotypeScore=141.0863;InbreedingCoeff=0.9784;MQ=65.10;MQ0=15;MQRankSum=-1.208;QD=13.31;ReadPosRankSum=-3.588;VQSLOD=3.4989;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:38:50.52:492,51,0	1/1:11,0:11:23.70:155,24,0	0/0:32,0:20:50.63:0,51,472	0/0:34,0:21:46.79:0,47,450	1/1:22,0:20:17.75:186,18,0	0/0:28,0:28:56.98:0,57,595	0/0:32,0:32:34.38:0,34,882	1/1:9,39:48:99:1439,103,0	0/0:30,0:29:72.12:0,72,926	0/0:30,0:29:79.40:0,79,905	0/0:20,0:19:38.99:0,39,399	0/0:23,0:23:53.97:0,54,612	0/0:25,0:24:46.65:0,47,746	0/0:27,0:26:72.04:0,72,849	0/0:37,0:37:94.39:0,94,1149	0/0:29,0:29:71.98:0,72,918	1/1:33,0:32:34.77:248,35,0	1/1:17,0:17:31.06:190,31,0	1/1:17,0:15:43.91:348,44,0	1/1:27,0:26:31.49:223,31,0	1/1:32,0:31:50.83:441,51,0	0/0:12,0:12:16.82:0,17,371	1/1:22,0:20:5.92:41,6,0	1/1:26,0:26:13.95:119,14,0	0/0:34,0:34:77.63:0,78,861	1/1:36,0:35:83.84:632,84,0	1/1:20,0:18:18.46:99,18,0	1/1:12,0:11:26.89:207,27,0
chr10	69879162	.	CCA	C	3828.23	PASS	AB=0.968;AC=14;AF=0.250;AN=56;BaseQRankSum=9.351;DP=857;FS=5.288;HRun=0;HaplotypeScore=124.7748;InbreedingCoeff=0.7568;MQ=59.49;MQ0=11;MQRankSum=3.114;QD=14.02;ReadPosRankSum=0.643;VQSLOD=3.4544;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:36:72.22:0,72,1096	0/0:2,0:12:23.99:0,24,211	0/1:57,1:25:13.80:14,0,294	0/0:41,0:21:27.03:0,27,358	0/0:25,1:27:16.11:0,16,895	0/0:27,0:27:40.47:0,40,933	0/0:21,3:24:12.17:0,12,647	0/1:38,2:41:25.08:25,0,1023	0/0:7,0:27:53.99:0,54,494	0/0:26,0:26:63.21:0,63,968	0/0:13,0:13:33.08:0,33,464	0/0:36,0:36:93.31:0,93,1467	0/0:31,2:32:9.32:0,9,1119	0/0:31,0:31:81.26:0,81,1252	0/0:47,0:47:79.75:0,80,1721	0/0:41,1:42:69.70:0,70,1626	0/0:14,0:17:9.83:0,10,70	0/0:10,0:22:14.93:0,15,128	1/1:8,11:19:33.10:392,33,0	1/1:9,22:31:63.19:746,63,0	1/1:7,21:28:50.99:590,51,0	0/0:33,0:33:58.69:0,59,1066	0/0:15,0:30:28.46:0,28,250	0/0:14,0:33:2.92:0,3,17	0/0:23,0:23:63.21:0,63,1004	1/1:10,33:44:57.11:1126,57,0	1/1:10,26:37:65.98:752,66,0	1/1:7,6:13:17.54:184,18,0
chr10	69879678	.	T	TC	11409.94	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-17.799;DP=755;FS=9.750;HRun=2;HaplotypeScore=70.6093;InbreedingCoeff=0.9988;MQ=85.45;MQ0=0;MQRankSum=-1.759;QD=40.75;ReadPosRankSum=2.740;VQSLOD=4.6538;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,1734	1/1:0,10:10:30.10:432,30,0	0/0:28,0:28:78.24:0,78,962	0/0:23,0:23:57.59:0,58,672	0/0:24,0:24:69.19:0,69,829	0/0:22,0:22:66.19:0,66,805	0/0:33,0:33:96.30:0,96,1189	0/0:29,0:29:81.25:0,81,1005	0/0:21,0:21:63.20:0,63,781	0/0:32,0:32:93.29:0,93,1151	0/0:20,0:20:57.18:0,57,707	0/0:40,0:40:99:0,117,1450	0/0:27,0:27:75.24:0,75,930	0/0:25,0:25:72.23:0,72,892	0/0:30,0:29:90.28:0,90,1116	0/0:27,0:27:81.25:0,81,1003	1/1:0,24:24:72.24:1037,72,0	1/1:0,25:25:75.25:1074,75,0	1/1:3,26:29:78.24:1099,78,0	1/1:2,25:27:75.25:1080,75,0	1/1:0,40:40:99:1685,117,0	0/0:26,0:26:78.25:0,78,967	1/1:1,22:23:63.21:903,63,0	1/1:1,35:36:99:1469,102,0	0/0:21,0:21:60.19:0,60,743	1/1:1,30:32:56.11:1249,56,0	1/1:0,28:28:78.26:1123,78,0	1/1:0,6:6:18.06:259,18,0
chr10	69879785	.	T	TCC	5069.64	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-7.437;DP=708;FS=0.813;HRun=6;HaplotypeScore=90.6883;InbreedingCoeff=0.9784;MQ=86.25;MQ0=0;MQRankSum=-1.933;QD=38.12;ReadPosRankSum=1.620;VQSLOD=4.3400;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,123,1447	0/0:12,0:12:33.07:0,33,387	0/0:31,0:30:59.34:0,59,750	0/0:32,0:32:70.80:0,71,715	0/0:24,0:24:69.22:0,69,840	0/0:23,0:23:63.17:0,63,743	0/0:30,0:30:41.14:0,41,774	0/0:26,0:25:57.15:0,57,677	0/0:25,0:25:66.18:0,66,780	0/0:18,0:18:48.13:0,48,560	0/0:22,0:22:54.15:0,54,647	0/0:32,0:32:87.21:0,87,1013	0/0:28,0:28:78.20:0,78,915	0/0:27,0:27:69.20:0,69,829	0/0:22,0:22:60.15:0,60,708	0/0:27,0:27:69.19:0,69,831	0/0:29,0:29:72.20:0,72,863	0/0:22,0:22:63.13:0,63,727	1/1:7,12:19:42.14:708,42,0	1/1:2,15:17:42.10:677,42,0	1/1:5,35:41:90.31:1522,90,0	0/0:20,0:20:54.15:0,54,644	0/0:22,0:22:66.17:0,66,779	0/0:28,0:28:75.15:0,75,871	0/0:26,0:26:69.19:0,69,818	1/1:6,25:31:78.19:1248,78,0	1/1:0,22:22:48.64:813,49,0	1/1:0,3:3:6.02:101,6,0
chr10	69880348	.	GA	G	10070.86	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=18.060;DP=649;FS=0.619;HRun=5;HaplotypeScore=102.6315;InbreedingCoeff=0.9971;MQ=69.84;MQ0=0;MQRankSum=-2.931;QD=28.29;ReadPosRankSum=0.563;VQSLOD=4.4640;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,47:47:99:1360,120,0	1/1:2,13:15:36.57:409,37,0	0/0:12,0:12:31.33:0,31,340	0/0:6,0:6:15.04:0,15,184	1/1:2,21:23:57.16:646,57,0	0/0:22,0:22:60.18:0,60,802	0/0:20,0:20:57.18:0,57,763	1/1:4,41:45:99:1367,123,0	0/0:22,0:22:66.21:0,66,884	0/0:26,0:26:78.25:0,78,1055	0/0:14,0:14:42.10:0,42,540	0/0:30,0:30:90.30:0,90,1231	0/0:22,0:22:60.20:0,60,821	0/0:12,0:12:36.11:0,36,477	0/0:28,0:28:78.25:0,78,1051	0/0:21,0:21:57.15:0,57,721	1/1:0,16:16:30.04:326,30,0	1/1:1,14:15:33.09:374,33,0	1/1:0,19:19:57.16:646,57,0	1/1:3,23:26:59.32:669,59,0	1/1:1,27:27:66.19:748,66,0	0/0:25,0:25:75.24:0,75,1011	1/1:2,22:24:51.02:578,51,0	1/1:1,32:33:84.24:952,84,0	0/0:33,0:33:96.31:0,96,1299	1/1:3,29:32:87.23:977,87,0	1/1:0,24:24:69.20:780,69,0	1/1:0,9:9:21.06:238,21,0
chr10	69880459	.	T	TAA	5393.49	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=17.964;DP=620;FS=1.066;HRun=8;HaplotypeScore=138.1341;InbreedingCoeff=0.9708;MQ=75.20;MQ0=0;MQRankSum=-13.403;QD=17.07;ReadPosRankSum=-3.754;VQSLOD=1.7503;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,17:22:40.16:580,40,0	1/1:6,0:12:23.91:205,24,0	0/0:19,0:18:43.19:0,43,452	0/0:16,0:16:30.03:0,30,317	1/1:5,26:32:77.66:1062,78,0	0/0:25,0:25:66.17:0,66,736	0/0:21,0:21:54.11:0,54,592	1/1:10,0:49:95.81:349,96,0	0/0:19,0:19:54.15:0,54,602	0/0:25,0:25:63.15:0,63,686	0/0:26,0:26:66.15:0,66,726	0/0:24,0:24:63.08:0,63,685	0/0:21,0:21:60.14:0,60,658	0/0:17,0:17:42.08:0,42,459	0/0:21,0:21:63.12:0,63,679	0/0:19,0:19:48.11:0,48,535	1/1:11,0:20:42.89:376,43,0	1/1:9,0:12:19.12:130,19,0	1/1:10,0:11:20.63:144,21,0	1/1:22,0:37:86.64:752,87,0	1/1:8,0:9:7.10:60,7,0	0/0:27,0:27:81.22:0,81,902	1/1:23,0:34:55.70:459,56,0	1/1:5,0:9:12.76:79,13,0	0/0:24,0:24:63.17:0,63,701	1/1:17,0:30:65.44:577,65,0	1/1:19,0:31:62.98:563,63,0	1/1:4,0:6:6.89:58,7,0
chr10	69880468	.	C	CAA	8800.87	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=14.411;DP=571;FS=0.332;HRun=8;HaplotypeScore=114.1735;InbreedingCoeff=0.9810;MQ=77.41;MQ0=0;MQRankSum=-14.790;QD=38.77;ReadPosRankSum=1.238;VQSLOD=3.8758;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:36.51:559,37,0	1/1:0,12:12:24.08:407,24,0	0/0:21,0:20:57.09:0,57,876	0/0:12,0:12:36.11:0,36,509	1/1:29,0:29:70.43:947,70,0	0/0:23,0:23:69.18:0,69,1042	0/0:20,0:20:60.20:0,60,970	0/0:50,0:50:99:0,144,1678	0/0:18,0:18:54.17:0,54,855	0/0:24,0:24:69.22:0,69,1061	0/0:27,0:27:81.25:0,81,1252	0/0:22,0:22:66.23:0,66,1074	0/0:21,0:21:60.19:0,60,953	0/0:14,0:14:42.13:0,42,654	0/0:26,0:26:72.22:0,72,1125	0/0:17,0:17:51.17:0,51,822	1/1:1,18:18:42.14:745,42,0	1/1:1,9:11:19.31:324,19,0	1/1:0,13:14:42.13:738,42,0	1/1:4,25:29:87.27:1461,87,0	1/1:1,7:8:11.80:110,12,0	0/0:27,0:27:81.26:0,81,1295	1/1:0,25:26:59.92:999,60,0	1/1:2,4:6:11.07:151,11,0	0/0:22,0:22:66.23:0,66,1074	1/1:0,24:24:70.44:1150,70,0	1/1:3,23:26:63.21:1092,63,0	1/1:0,3:3:8.95:119,9,0
chr10	69884706	.	TCACACACACACACA	T	152.25	PASS	AC=2;AF=0.040;AN=50;BaseQRankSum=2.679;DP=523;FS=6.695;HRun=0;HaplotypeScore=198.0172;InbreedingCoeff=0.6759;MQ=74.88;MQ0=9;MQRankSum=-1.469;QD=15.23;ReadPosRankSum=-0.610;VQSLOD=1.9649;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,8:23:5.96:0,6,44	0/0:5,0:11:15.05:0,15,502	./.	./.	1/1:3,6:9:8.99:235,9,0	0/0:17,0:17:30.09:0,30,1476	0/0:22,0:23:23.44:0,23,947	0/0:19,0:19:24.08:0,24,755	0/0:13,0:14:30.10:0,30,1474	0/0:17,0:17:27.09:0,27,1171	0/0:15,0:15:15.05:0,15,666	0/0:17,0:17:39.11:0,39,1661	0/0:18,0:18:35.95:0,36,1733	0/0:15,0:16:27.08:0,27,1023	0/0:16,0:16:36.12:0,36,1967	0/0:17,0:17:24.07:0,24,869	0/0:21,0:19:36.12:0,36,1466	0/0:14,0:25:16.50:0,17,340	0/0:13,0:12:13.86:0,14,437	0/0:16,0:15:9.44:0,9,375	0/0:26,0:25:24.08:0,24,901	0/0:13,0:13:18.06:0,18,852	./.	0/0:38,0:38:39.09:0,39,1247	0/0:20,0:20:24.07:0,24,1072	0/0:19,0:18:38.61:0,39,1155	0/0:19,0:19:21.07:0,21,703	0/0:2,0:2:6.02:0,6,175
chr10	69885239	.	T	TTATCTATC	3904.82	PASS	AB=1.000;AC=21;AF=0.404;AN=52;BaseQRankSum=5.015;DP=771;FS=2.332;HRun=0;HaplotypeScore=196.6219;InbreedingCoeff=0.8645;MQ=68.76;MQ0=11;MQRankSum=-3.453;QD=12.32;ReadPosRankSum=-2.978;VQSLOD=2.6066;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:24.08:533,24,0	1/1:8,0:11:8.98:73,9,0	./.	./.	1/1:12,0:33:3.01:68,3,0	0/0:26,0:27:51.17:0,51,1191	0/0:18,0:19:30.09:0,30,588	1/1:47,0:47:24.08:327,24,0	0/0:31,0:31:45.15:0,45,1006	0/0:31,0:31:57.18:0,57,1244	0/0:23,0:23:48.15:0,48,1048	0/0:34,0:34:4.91:0,5,1382	0/0:27,0:27:48.15:0,48,1014	0/0:30,0:30:48.10:0,48,1011	0/0:28,0:28:45.15:0,45,1028	0/0:32,0:32:51.16:0,51,1044	0/0:8,0:17:9.87:0,10,103	0/1:22,0:22:1.77:2,0,891	1/1:21,3:25:15.04:398,15,0	1/1:15,11:30:15.05:532,15,0	1/1:6,0:17:17.96:146,18,0	0/0:26,0:26:42.14:0,42,885	0/0:21,0:22:52.06:0,52,1169	0/0:18,0:18:33.11:0,33,787	0/0:23,0:23:39.13:0,39,867	1/1:15,0:38:68.94:655,69,0	1/1:15,19:40:24.08:927,24,0	1/1:9,10:23:6.02:244,6,0
chr10	69887176	.	T	TAAACAAAC	6003.88	PASS	AB=1.000;AC=17;AF=0.354;AN=48;BaseQRankSum=-5.840;DP=580;FS=9.503;HRun=0;HaplotypeScore=79.0478;InbreedingCoeff=0.6380;MQ=33.65;MQ0=139;MQRankSum=-2.094;QD=35.95;ReadPosRankSum=0.660;VQSLOD=3.4469;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:15:3.01:0,3,42	0/0:2,0:12:12.38:0,12,379	./.	0/0:20,0:2:3:0,3,25	0/0:6,0:31:9.28:0,9,144	0/0:23,0:16:5.93:0,6,89	0/0:13,0:10:12.04:0,12,220	0/1:14,0:19:18.90:19,0,81	0/0:25,0:16:5.03:0,5,92	0/0:34,0:30:55.96:0,56,1278	0/0:15,0:14:6.02:0,6,73	0/0:21,0:12:8.96:0,9,173	0/0:18,0:14:5.56:0,6,136	0/0:26,0:20:6.02:0,6,111	./.	0/0:21,0:14:17.92:0,18,281	1/1:6,5:6:3.01:72,3,0	1/1:4,3:4:3.01:115,3,0	1/1:7,5:11:21.94:566,22,0	1/1:8,23:38:42.14:1733,42,0	./.	0/0:32,0:32:24.01:0,24,472	1/1:9,13:28:27.56:1098,28,0	./.	0/0:26,0:25:38.62:0,39,897	1/1:7,11:17:39.13:1274,39,0	1/1:3,15:17:24.08:1002,24,0	1/1:0,2:4:3.01:125,3,0
chr10	69887288	.	A	ACTCCTGCTTTTAT	13666.38	PASS	AC=16;AF=0.348;AN=46;BaseQRankSum=-0.653;DP=516;FS=34.429;HRun=0;HaplotypeScore=156.3756;InbreedingCoeff=0.8581;MQ=26.16;MQ0=154;MQRankSum=-0.866;QD=98.32;ReadPosRankSum=-0.632;VQSLOD=2.5520;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:10:12.04:0,12,457	0/0:15,0:15:33.11:0,33,1255	./.	./.	0/0:16,0:16:11.35:0,11,450	0/0:21,0:16:24.55:0,25,915	0/0:11,0:2:3.01:0,3,40	./.	0/0:21,0:9:15.05:0,15,564	0/0:24,0:22:48.16:0,48,1646	0/0:12,0:11:6.02:0,6,228	0/0:29,0:17:24.08:0,24,909	0/0:18,0:14:21.32:0,21,740	0/0:24,0:11:18.06:0,18,645	0/0:17,0:12:30.10:0,30,1104	0/0:23,0:17:38.83:0,39,1485	1/1:4,0:3:3.01:192,3,0	./.	1/1:7,1:3:6.02:312,6,0	1/1:22,10:32:66.23:3212,66,0	./.	0/0:30,0:30:36.12:0,36,1370	1/1:21,5:26:47.70:2460,48,0	1/1:5,1:4:9.03:221,9,0	0/0:32,0:31:31.67:0,32,1213	1/1:17,8:20:48.16:2769,48,0	1/1:22,8:31:69.70:3983,70,0	1/1:7,0:6:9.03:519,9,0
chr10	69887777	.	T	TTGGTGGTGGTGGTGG	9581.18	PASS	AB=0.830;AC=19;AF=0.339;AN=56;BaseQRankSum=4.341;DP=467;FS=3.246;HRun=0;HaplotypeScore=177.9527;InbreedingCoeff=0.7072;MQ=53.32;MQ0=22;MQRankSum=-9.153;QD=45.19;ReadPosRankSum=-1.525;VQSLOD=4.4355;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:10:45.76:203,0,46	0/0:6,0:6:15.05:0,15,555	0/0:26,0:14:33.11:0,33,937	0/0:25,0:20:50.80:0,51,1393	0/0:6,0:5:5.14:0,5,13	0/0:12,0:12:33.11:0,33,1227	0/0:21,0:18:51.09:0,51,1801	0/0:12,0:8:24.04:0,24,311	0/0:14,0:13:33.11:0,33,1363	0/0:17,0:17:48.15:0,48,1608	0/0:13,0:11:29.24:0,29,887	0/0:22,0:21:57.20:0,57,2155	0/0:12,0:12:36.09:0,36,1402	0/0:11,0:11:33.09:0,33,1188	0/0:11,0:11:27.09:0,27,1114	0/0:16,0:16:39.13:0,39,1550	1/1:5,14:22:6.02:87,6,0	0/1:11,1:11:63.36:566,0,63	1/1:24,0:22:47.89:1173,48,0	1/1:11,0:10:6.44:831,6,0	1/1:33,0:29:42.31:1412,42,0	0/0:20,0:20:47.96:0,48,2055	1/1:15,0:14:26.83:1137,27,0	0/1:7,15:29:29.20:136,0,29	0/0:11,0:10:26.30:0,26,953	1/1:32,0:31:81.55:2335,82,0	1/1:17,0:16:39.13:1214,39,0	1/1:6,0:6:18.01:486,18,0
chr10	69887780	.	T	TGG	619.30	PASS	AB=0.917;AC=14;AF=0.250;AN=56;BaseQRankSum=11.101;DP=447;FS=3.135;HRun=1;HaplotypeScore=109.8142;InbreedingCoeff=0.2912;MQ=47.44;MQ0=22;MQRankSum=-7.533;QD=3.28;ReadPosRankSum=2.727;VQSLOD=-0.7536;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:19.56:0,20,156	0/0:6,0:6:15.05:0,15,235	0/0:24,0:12:33.08:0,33,492	0/0:22,0:18:40.30:0,40,721	0/0:7,0:6:15.92:0,16,90	0/0:12,0:12:35.99:0,36,551	0/0:21,0:18:51.16:0,51,786	0/0:14,0:10:27.05:0,27,371	0/0:12,0:11:33.11:0,33,537	0/0:16,0:16:48.15:0,48,714	0/0:13,0:11:24.03:0,24,339	0/0:22,0:21:60.12:0,60,927	0/0:13,0:13:39.12:0,39,600	0/0:11,0:11:32.78:0,33,499	0/0:11,0:11:26.96:0,27,440	0/0:15,0:15:39.13:0,39,569	1/1:15,0:15:5.55:32,6,0	0/1:11,1:11:18.18:18,0,75	0/1:21,2:21:99:135,0,119	0/1:9,1:10:10.04:43,0,10	0/1:30,2:29:62.88:63,0,136	0/0:19,0:19:51.17:0,51,809	1/1:10,2:12:2.07:65,2,0	1/1:24,1:24:0.29:1,0,0	0/0:10,0:9:27.09:0,27,422	0/1:29,4:33:89.81:245,0,90	1/1:13,4:16:17.50:156,17,0	0/1:6,0:6:17.21:17,0,70
chr10	69887784	.	T	TGGTGGT	4441.14	PASS	AB=0.954;AC=16;AF=0.286;AN=56;BaseQRankSum=10.743;DP=433;FS=6.289;HRun=0;HaplotypeScore=122.9992;InbreedingCoeff=0.4105;MQ=46.16;MQ0=24;MQRankSum=-8.946;QD=23.50;ReadPosRankSum=1.114;VQSLOD=4.1899;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:5.63:120,6,0	0/0:6,0:6:12.76:0,13,144	0/0:22,0:10:21.05:0,21,357	0/0:23,0:18:35.57:0,36,621	0/0:6,0:5:2.80:0,3,7	0/0:12,0:12:35.89:0,36,623	0/0:19,0:16:45.15:0,45,905	0/0:12,0:8:16.53:0,17,129	0/0:13,0:12:36.09:0,36,717	0/0:14,0:14:39.13:0,39,817	0/0:11,0:9:22.50:0,23,446	0/0:23,0:21:63.20:0,63,1242	0/0:13,0:13:39.13:0,39,846	0/0:14,0:13:36.10:0,36,661	0/0:11,0:11:26.97:0,27,567	0/0:15,0:15:39.13:0,39,685	1/1:16,0:16:5.99:62,6,0	0/1:10,0:9:53.04:153,0,53	0/1:13,7:19:66.03:585,0,66	1/1:10,0:9:0.07:396,0,0	0/1:35,0:32:92.12:606,0,92	0/0:20,0:20:52.73:0,53,1105	1/1:12,0:11:27.08:509,27,0	0/1:23,0:22:0.27:0,0,0	0/0:10,0:9:26.12:0,26,466	0/1:33,0:32:28.57:1155,0,29	1/1:18,0:17:31.01:672,31,0	0/1:4,0:4:46.46:183,0,46
chr10	69887820	.	TGGTGGTG	T	820.38	PASS	AB=0.923;AC=13;AF=0.250;AN=52;BaseQRankSum=5.270;DP=299;FS=0.827;HRun=0;HaplotypeScore=96.4370;InbreedingCoeff=0.3397;MQ=39.75;MQ0=28;MQRankSum=-4.788;QD=6.17;ReadPosRankSum=2.411;VQSLOD=1.5170;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:8:9.25:0,9,80	0/0:5,0:5:11.97:0,12,214	./.	./.	0/0:6,0:5:4.26:0,4,75	0/0:7,0:7:14.55:0,15,292	0/0:21,0:16:30.98:0,31,566	0/0:11,0:7:11.87:0,12,175	0/0:8,0:5:15.05:0,15,421	0/0:9,0:9:21.06:0,21,409	0/0:8,0:7:12.04:0,12,249	0/0:14,0:13:35.75:0,36,1009	0/0:14,0:13:30.10:0,30,781	0/0:12,0:11:20.96:0,21,447	0/0:11,0:10:20.08:0,20,348	0/0:11,0:10:11.83:0,12,286	1/1:10,0:13:8.72:131,9,0	0/1:11,1:11:20.58:21,0,72	0/1:13,0:11:1.51:111,0,2	0/1:5,0:5:27.70:60,0,28	1/1:24,0:19:5.49:23,5,0	0/0:11,0:11:20.94:0,21,537	0/1:11,1:10:8.85:9,0,16	1/1:16,1:16:3.55:65,4,0	0/0:8,0:8:21.53:0,22,489	0/1:16,2:18:79.49:291,0,79	0/1:10,2:11:0.27:245,0,0	0/1:5,0:5:0.57:14,0,1
chr10	69887823	.	TGGTG	T	581.42	PASS	AB=0.964;AC=16;AF=0.308;AN=52;BaseQRankSum=5.666;DP=308;FS=2.753;HRun=0;HaplotypeScore=87.0843;InbreedingCoeff=0.4538;MQ=39.45;MQ0=29;MQRankSum=-4.935;QD=4.15;ReadPosRankSum=2.759;VQSLOD=1.7828;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:10:13.15:0,13,80	0/0:6,0:6:12.04:0,12,173	./.	./.	0/0:7,0:6:3.01:0,3,56	0/0:8,0:7:13.75:0,14,215	0/0:20,0:15:27.47:0,27,362	0/0:10,0:8:11.87:0,12,118	0/0:8,0:5:15.05:0,15,282	0/0:11,0:11:20.09:0,20,305	0/0:8,0:7:12.04:0,12,179	0/0:15,0:14:39.09:0,39,696	0/0:12,0:11:27.06:0,27,486	0/0:13,0:12:12.42:0,12,315	0/0:10,0:9:19.87:0,20,282	0/0:9,0:7:11.84:0,12,194	1/1:10,2:13:8.72:119,9,0	0/1:13,0:12:22:22,0,32	1/1:13,0:12:4.58:79,5,0	0/1:5,1:5:20.40:43,0,20	1/1:26,0:21:8.34:39,8,0	0/0:10,0:10:17.93:0,18,350	0/1:13,0:11:9.30:9,0,13	1/1:19,1:18:4.01:37,4,0	0/0:9,0:9:24.54:0,25,398	0/1:20,0:20:24.04:207,0,24	1/1:12,0:11:6.93:170,7,0	1/1:3,0:3:2.82:18,3,0
chr10	69887826	.	TG	T	365.93	PASS	AB=1.000;AC=19;AF=0.352;AN=54;BaseQRankSum=6.602;DP=324;FS=4.004;HRun=2;HaplotypeScore=77.4310;InbreedingCoeff=0.6539;MQ=39.66;MQ0=29;MQRankSum=-4.195;QD=2.46;ReadPosRankSum=2.914;VQSLOD=-0.3044;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:10:9.15:0,9,37	0/0:8,0:8:15.04:0,15,175	./.	0/0:1,0:1:2.84:0,3,14	0/0:8,0:7:3.01:0,3,40	0/0:8,0:7:13.39:0,13,147	0/0:22,0:17:27.42:0,27,259	0/0:10,0:9:11.61:0,12,66	0/0:8,0:5:12.03:0,12,142	0/0:12,0:12:19.97:0,20,250	0/0:9,0:8:11.99:0,12,125	0/0:15,0:13:33.08:0,33,406	0/0:12,0:11:25.87:0,26,298	0/0:13,0:12:5.09:0,5,178	0/0:10,0:9:19.30:0,19,212	0/0:10,0:8:11.17:0,11,113	1/1:13,1:14:9.35:65,9,0	1/1:11,2:12:1.51:29,2,0	1/1:15,1:14:5.55:42,6,0	0/1:8,0:6:14.14:27,0,14	1/1:29,0:24:8.66:39,9,0	0/0:9,0:9:18.05:0,18,224	1/1:11,2:11:2.42:15,2,0	1/1:17,1:16:2.72:10,3,0	0/0:9,0:9:24.07:0,24,297	1/1:19,0:19:15.56:159,16,0	1/1:13,0:12:10.21:103,10,0	1/1:6,0:6:5.89:52,6,0
chr10	69887827	.	G	GT	951.63	PASS	AB=0.727;AC=19;AF=0.352;AN=54;BaseQRankSum=6.153;DP=338;FS=4.004;HRun=1;HaplotypeScore=81.7204;InbreedingCoeff=0.6642;MQ=39.50;MQ0=32;MQRankSum=-5.342;QD=5.99;ReadPosRankSum=2.625;VQSLOD=0.8802;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:9:9.75:0,10,66	0/0:8,0:8:15.05:0,15,201	./.	0/0:4,0:1:2.84:0,3,14	0/0:8,0:7:3.01:0,3,38	0/0:8,0:7:13.40:0,13,163	0/0:21,0:16:27.43:0,27,291	0/0:10,0:9:11.77:0,12,76	0/0:8,0:5:12.03:0,12,149	0/0:13,0:13:19.97:0,20,271	0/0:9,0:8:11.99:0,12,142	0/0:16,0:14:33.08:0,33,425	0/0:12,0:11:25.87:0,26,309	0/0:11,1:11:5.56:0,6,191	0/0:10,0:9:19.31:0,19,244	0/0:11,0:9:11.92:0,12,135	1/1:15,0:15:9.16:73,9,0	1/1:13,0:12:1.72:56,2,0	1/1:18,0:16:6.81:60,7,0	0/1:5,3:6:13.31:130,0,13	1/1:15,16:26:9.08:143,9,0	0/0:9,0:9:18.06:0,18,237	1/1:12,3:13:2.53:46,3,0	1/1:18,2:18:3.15:45,3,0	0/0:9,0:9:24.07:0,24,315	1/1:14,5:19:16.29:350,16,0	1/1:10,4:13:9.69:172,10,0	1/1:4,0:6:5.89:52,6,0
chr10	69887830	.	GTGTGTGTGT	G	111.21	PASS	AB=1.000;AC=5;AF=0.093;AN=54;BaseQRankSum=4.195;DP=357;FS=2.947;HRun=0;HaplotypeScore=112.9959;InbreedingCoeff=0.1563;MQ=40.07;MQ0=32;MQRankSum=-2.636;QD=1.82;ReadPosRankSum=-1.296;VQSLOD=2.2525;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:7:3.87:0,4,102	0/0:7,0:7:15.05:0,15,704	./.	0/0:9,0:1:2.04:0,2,6	0/0:7,0:7:3.01:0,3,43	0/0:10,0:9:14.55:0,15,518	0/0:19,0:14:22.28:0,22,808	1/1:5,4:8:7.80:159,8,0	0/0:8,0:5:15.05:0,15,558	0/0:16,0:16:45.57:0,46,1467	0/0:9,0:8:15.05:0,15,556	0/0:17,0:16:42.14:0,42,1430	0/0:13,0:12:30.06:0,30,848	0/0:13,0:12:22.93:0,23,718	0/0:13,0:12:26.92:0,27,961	0/0:13,0:11:24.08:0,24,761	0/0:15,0:15:15.85:0,16,299	0/0:14,0:13:12.04:0,12,418	0/1:19,0:17:17.25:17,0,418	0/0:9,0:7:9.03:0,9,315	0/0:31,0:26:9.50:0,10,337	0/0:9,0:9:18.04:0,18,530	0/0:15,0:13:2.44:0,2,130	0/0:22,0:20:5.20:0,5,131	0/0:9,0:9:23.78:0,24,928	0/1:18,0:18:32.18:32,0,1035	0/1:15,0:14:14.39:14,0,745	0/0:7,0:6:5.96:0,6,140
chr10	69889634	.	GT	G	5453.39	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.251;DP=655;FS=0.319;HRun=7;HaplotypeScore=81.1570;InbreedingCoeff=0.9995;MQ=80.67;MQ0=0;MQRankSum=0.212;QD=26.34;ReadPosRankSum=-0.436;VQSLOD=5.0931;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,40:41:99:1132,111,0	0/0:15,0:15:45.14:0,45,555	0/0:18,0:17:25.63:0,26,316	0/0:19,0:19:34.06:0,34,369	1/1:3,30:33:87.06:853,87,0	0/0:23,0:23:66.20:0,66,816	0/0:31,0:31:87.25:0,87,1063	1/1:5,26:30:72.16:734,72,0	0/0:14,0:14:42.13:0,42,526	0/0:26,0:26:72.21:0,72,882	0/0:26,0:26:75.23:0,75,930	0/0:24,0:24:69.21:0,69,854	0/0:22,0:22:63.20:0,63,792	0/0:19,0:19:57.17:0,57,702	0/0:22,0:22:60.17:0,60,730	0/0:28,0:28:81.26:0,81,1019	1/1:4,31:35:87.19:887,87,0	1/1:1,24:25:72.08:708,72,0	0/0:12,0:12:33.05:0,33,379	0/0:26,0:26:75.22:0,75,916	0/0:23,0:23:66.15:0,66,767	0/0:22,0:22:66.19:0,66,799	1/1:0,25:25:72.12:723,72,0	1/1:1,16:17:42.03:416,42,0	0/0:20,0:20:54.16:0,54,668	0/0:25,0:25:72.22:0,72,885	0/0:24,0:24:63.11:0,63,702	0/0:9,0:9:27.07:0,27,326
chr10	69890986	.	TAATAAATAAATAAATAAATA	T	12429.56	PASS	AB=0.653;AC=26;AF=0.500;AN=52;BaseQRankSum=10.450;DP=348;FS=2.067;HRun=0;HaplotypeScore=185.6913;InbreedingCoeff=0.7101;MQ=62.70;MQ0=0;MQRankSum=-6.309;QD=55.49;ReadPosRankSum=2.013;VQSLOD=4.1919;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,9:15:21.07:1076,21,0	1/1:4,8:12:18.06:840,18,0	./.	./.	1/1:7,16:23:36.12:1534,36,0	0/0:16,0:16:42.14:0,42,3780	0/0:7,0:7:6.02:0,6,564	1/1:16,8:24:24.04:339,24,0	0/0:3,0:3:9.03:0,9,845	0/0:5,0:5:6.02:0,6,504	0/0:10,0:10:21.07:0,21,1973	0/0:11,0:11:21.07:0,21,1512	0/0:10,0:10:18.06:0,18,1241	0/0:7,0:7:3.01:0,3,282	0/0:9,0:9:21.07:0,21,1698	0/0:6,0:6:6.02:0,6,564	1/1:11,5:16:6.02:323,6,0	1/1:7,8:15:9.03:485,9,0	1/1:9,6:15:18.03:676,18,0	1/1:12,5:17:11.74:621,12,0	0/1:5,3:8:0.53:46,0,1	0/0:7,0:7:6.02:0,6,327	1/1:5,6:11:12.04:621,12,0	1/1:5,2:7:3.01:148,3,0	0/0:11,0:11:15.05:0,15,1255	0/1:7,19:26:99:2708,0,222	1/1:8,21:29:37.44:2526,37,0	1/1:1,5:6:9.03:485,9,0
chr10	69894012	.	A	ACCAGG	8125.60	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=14.252;DP=405;FS=3.759;HRun=0;HaplotypeScore=120.4538;InbreedingCoeff=0.9806;MQ=97.46;MQ0=0;MQRankSum=-13.105;QD=66.60;ReadPosRankSum=3.697;VQSLOD=5.8699;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:11:33.11:848,33,0	1/1:0,6:7:21.07:580,21,0	0/0:23,0:24:69.19:0,69,1489	0/0:24,0:23:66.66:0,67,1392	1/1:4,9:14:33.59:746,34,0	0/0:34,0:34:99:0,99,2261	0/0:22,0:22:66.21:0,66,1490	1/1:2,4:6:18.03:374,18,0	0/0:21,0:21:60.19:0,60,1352	0/0:17,0:17:48.16:0,48,1102	0/0:19,0:19:57.20:0,57,1306	0/0:17,0:17:51.17:0,51,1125	0/0:25,0:25:75.22:0,75,1675	0/0:21,0:21:60.19:0,60,1352	0/0:17,0:17:51.18:0,51,1187	0/0:14,0:14:42.14:0,42,979	1/1:1,7:10:25.88:591,26,0	1/1:3,1:4:9.03:159,9,0	1/1:1,5:6:14.95:407,15,0	1/1:1,7:8:21.02:560,21,0	1/1:4,3:7:18.04:328,18,0	0/0:10,0:10:30.10:0,30,675	1/1:1,9:10:26.77:715,27,0	1/1:0,6:6:18.06:475,18,0	0/0:18,0:18:48.16:0,48,1118	1/1:1,8:9:27.09:688,27,0	1/1:2,16:20:53.94:1389,54,0	1/1:1,3:4:12.03:267,12,0
chr10	69894013	.	T	TAGATTCGGA	19075.66	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=14.399;DP=458;FS=0.363;HRun=0;HaplotypeScore=158.3451;InbreedingCoeff=0.9869;MQ=92.04;MQ0=1;MQRankSum=-15.721;QD=107.17;ReadPosRankSum=1.032;VQSLOD=5.5652;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,9:14:41.63:1586,42,0	1/1:1,6:7:21.03:811,21,0	0/0:24,0:24:69.24:0,69,2030	0/0:23,0:23:63.20:0,63,1788	1/1:7,9:16:45.14:1708,45,0	0/0:33,0:33:96.33:0,96,3100	0/0:21,0:21:63.22:0,63,2021	1/1:19,4:23:69.24:2757,69,0	0/0:21,0:21:63.21:0,63,1930	0/0:16,0:16:48.16:0,48,1536	0/0:19,0:19:57.18:0,57,1678	0/0:17,0:17:51.17:0,51,1519	0/0:26,0:26:72.25:0,72,2209	0/0:20,0:20:60.19:0,60,1833	0/0:17,0:17:51.17:0,51,1542	0/0:14,0:14:42.14:0,42,1321	1/1:6,7:13:33.11:1358,33,0	1/1:2,1:3:9.03:248,9,0	1/1:8,5:13:39.11:1468,39,0	1/1:6,7:13:33.07:1284,33,0	1/1:10,3:12:33.11:1021,33,0	0/0:10,0:10:30.10:0,30,946	1/1:2,9:11:27.09:1178,27,0	1/1:8,6:14:39.13:1498,39,0	0/0:18,0:18:51.15:0,51,1520	1/1:3,8:11:33.11:1320,33,0	1/1:7,16:23:63.04:2394,63,0	1/1:1,3:4:12.04:446,12,0
chr10	69894192	.	C	CT	5247.20	PASS	AB=0.986;AC=30;AF=0.536;AN=56;BaseQRankSum=-3.387;DP=374;FS=8.635;HRun=8;HaplotypeScore=43.4379;InbreedingCoeff=0.7536;MQ=78.61;MQ0=3;MQRankSum=-2.906;QD=18.81;ReadPosRankSum=-0.231;VQSLOD=3.8015;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:18:24.07:277,24,0	1/1:1,4:5:12.04:138,12,0	0/1:32,0:14:6.50:6,0,51	0/1:33,1:19:34.34:34,0,74	1/1:4,12:16:33.10:381,33,0	0/0:15,0:15:36.02:0,36,329	0/0:5,0:5:9:0,9,82	1/1:8,36:44:99:1236,108,0	0/0:10,0:10:21:0,21,192	0/0:13,0:13:36.01:0,36,327	0/0:17,0:17:33.01:0,33,302	0/0:4,0:4:12.01:0,12,110	0/0:3,0:3:9:0,9,82	0/0:7,0:7:15.01:0,15,137	0/0:3,0:3:6:0,6,55	0/0:4,0:4:9:0,9,82	1/1:5,22:28:63.10:703,63,0	1/1:3,15:18:45.13:519,45,0	1/1:8,21:29:63.19:727,63,0	1/1:3,5:8:12.04:139,12,0	1/1:4,3:7:6.02:69,6,0	0/0:1,0:1:3:0,3,27	1/1:0,4:4:9.03:104,9,0	1/1:1,2:3:6.02:69,6,0	0/0:13,0:13:30:0,30,271	1/1:0,8:8:24.07:277,24,0	1/1:3,10:14:26.91:291,27,0	1/1:1,8:9:24.07:277,24,0
chr10	69896072	.	GTGTGTGTGTGTGTGTA	G	1317.24	PASS	AB=1.000;AC=19;AF=0.396;AN=48;BaseQRankSum=5.645;DP=441;FS=25.793;HRun=0;HaplotypeScore=133.1916;InbreedingCoeff=0.4534;MQ=35.00;MQ0=85;MQRankSum=-1.324;QD=9.90;ReadPosRankSum=0.583;VQSLOD=0.6904;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:7,0:6:5.79:65,6,0	1/1:10,0:1:2.04:6,2,0	0/0:12,0:3:3.48:0,3,64	./.	0/0:21,0:17:3.01:0,3,180	0/0:16,0:9:3.37:0,3,9	0/1:20,0:14:74.63:113,0,75	0/0:14,0:11:3.01:0,3,174	0/0:24,0:16:36.12:0,36,1870	0/0:16,0:12:2.19:0,2,18	0/0:19,0:15:6.02:0,6,149	0/0:19,0:19:12.04:0,12,424	0/0:19,0:16:6.02:0,6,210	0/0:20,0:16:0:0,0,0	0/0:13,0:10:5.56:0,6,148	1/1:3,5:6:6.02:245,6,0	1/1:3,5:8:6.02:269,6,0	0/0:11,0:8:4.67:0,5,23	1/1:22,1:22:0.47:2,0,0	./.	0/0:20,0:18:9.03:0,9,483	./.	1/1:14,1:14:0.19:0,0,0	0/0:22,0:20:5.97:0,6,95	1/1:15,0:13:8.62:150,9,0	1/1:21,0:19:15.05:507,15,0	1/1:6,0:4:2.96:102,3,0
chr10	69896074	.	GTGTGTGTGTGTGTA	G	1479.18	PASS	AB=1.000;AC=21;AF=0.457;AN=46;BaseQRankSum=4.482;DP=439;FS=24.974;HRun=0;HaplotypeScore=124.1270;InbreedingCoeff=0.5154;MQ=34.73;MQ0=90;MQRankSum=-0.461;QD=9.93;ReadPosRankSum=0.618;VQSLOD=0.8998;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:7,0:6:5.98:117,6,0	0/1:13,0:2:0.80:1,0,19	0/0:14,0:3:3.48:0,3,64	./.	0/0:21,0:16:3.01:0,3,155	0/0:16,0:9:3.37:0,3,8	1/1:14,5:12:14.63:139,15,0	0/0:14,0:11:3.01:0,3,144	0/0:23,0:15:36.12:0,36,1568	1/1:15,0:11:0.83:1,1,0	0/0:18,0:14:6.02:0,6,92	0/0:19,0:19:9.03:0,9,312	0/0:19,0:16:3.01:0,3,146	./.	0/0:13,0:10:5.69:0,6,88	1/1:8,0:6:6.02:208,6,0	1/1:8,0:8:6.02:228,6,0	0/0:9,0:6:0:0,0,0	1/1:8,13:20:0.40:1,0,0	./.	0/0:19,0:17:9.03:0,9,401	./.	1/1:16,0:14:0.33:0,0,0	0/0:22,0:20:2.94:0,3,20	1/1:15,0:13:11.50:202,12,0	1/1:12,9:19:15.05:598,15,0	1/1:5,1:4:3.01:121,3,0
chr10	69896076	.	GTGTGTGTGTGTA	G	1294.26	PASS	AB=1.000;AC=22;AF=0.500;AN=44;BaseQRankSum=4.416;DP=442;FS=10.118;HRun=0;HaplotypeScore=118.2476;InbreedingCoeff=0.4791;MQ=34.49;MQ0=94;MQRankSum=-0.564;QD=7.40;ReadPosRankSum=0.500;VQSLOD=1.7994;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:7,0:6:6.02:152,6,0	0/1:14,0:2:0.80:1,0,19	0/0:14,0:3:3.01:0,3,59	./.	0/0:20,0:15:3.01:0,3,129	0/0:15,0:8:2.80:0,3,7	1/1:18,0:12:14.86:120,15,0	0/0:14,0:11:3.01:0,3,115	0/0:23,0:15:33.04:0,33,1229	1/1:16,0:12:0.89:2,1,0	0/0:18,0:14:2.98:0,3,21	0/0:18,0:18:6.02:0,6,230	0/0:20,0:16:3.01:0,3,121	./.	0/0:14,0:10:2.78:0,3,21	1/1:8,0:6:6.02:172,6,0	1/1:8,0:8:6.02:188,6,0	./.	1/1:20,0:19:0.39:1,0,0	./.	0/0:18,0:16:6.01:0,6,314	./.	1/1:17,0:15:0.16:0,0,0	0/1:24,0:22:0.02:0,0,0	1/1:7,8:13:8.83:186,9,0	1/1:22,0:19:15.05:503,15,0	1/1:6,0:4:3.01:101,3,0
chr10	69896078	.	GTGTGTGTGTA	G	1124.17	PASS	AB=1.000;AC=26;AF=0.591;AN=44;BaseQRankSum=3.255;DP=431;FS=0.000;HRun=0;HaplotypeScore=108.4479;InbreedingCoeff=0.4095;MQ=36.45;MQ0=98;MQRankSum=0.443;QD=5.25;ReadPosRankSum=0.349;VQSLOD=1.1620;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:5,2:6:6.02:186,6,0	0/1:14,0:2:0.83:1,0,19	0/0:16,0:4:5.91:0,6,55	./.	0/0:21,0:15:3.01:0,3,95	0/0:15,0:8:2.49:0,2,6	1/1:19,0:12:14.82:100,15,0	0/0:12,0:9:3.01:0,3,98	0/0:23,0:15:12.90:0,13,1007	1/1:16,0:12:0.89:2,1,0	1/1:18,0:13:2.38:9,2,0	0/0:18,0:18:5.61:0,6,190	0/0:20,0:16:3.01:0,3,96	./.	1/1:14,0:10:2.80:13,3,0	1/1:7,0:5:6.02:137,6,0	1/1:8,0:8:6.02:151,6,0	./.	1/1:16,0:15:0.44:1,0,0	./.	0/1:17,0:15:10.94:11,0,255	./.	0/1:18,0:15:0.04:0,0,0	0/1:23,0:22:0.26:0,0,0	1/1:13,0:11:6.80:144,7,0	1/1:19,0:16:15.05:415,15,0	1/1:5,0:4:3.01:82,3,0
chr10	69896080	.	GTGTGTGTA	G	895.50	PASS	AB=1.000;AC=27;AF=0.614;AN=44;BaseQRankSum=2.963;DP=413;FS=0.000;HRun=0;HaplotypeScore=99.0594;InbreedingCoeff=0.3231;MQ=36.61;MQ0=96;MQRankSum=0.218;QD=3.94;ReadPosRankSum=0.123;VQSLOD=1.4504;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:7,0:6:6.02:149,6,0	0/1:16,0:2:0.84:1,0,19	0/0:17,0:4:5.87:0,6,37	./.	0/0:22,0:15:3.01:0,3,77	0/0:12,0:6:2.13:0,2,5	1/1:18,0:12:14.81:100,15,0	0/0:12,0:9:3.01:0,3,81	0/1:23,0:15:10.38:10,0,793	1/1:16,0:12:0.89:2,1,0	1/1:18,0:13:2.54:9,3,0	0/0:17,0:17:5.44:0,5,148	0/0:21,0:17:3.01:0,3,71	./.	1/1:16,0:12:2.32:12,2,0	1/1:7,0:5:6.02:103,6,0	1/1:6,0:6:6.02:119,6,0	./.	1/1:16,0:15:0.42:1,0,0	./.	0/1:17,0:15:10.94:11,0,205	./.	0/1:16,0:13:0.12:0,0,0	0/1:22,0:21:0.17:0,0,0	1/1:12,0:11:6.98:107,7,0	1/1:12,0:10:15.05:332,15,0	1/1:5,0:4:3.01:64,3,0
chr10	69896890	.	CT	C	6941.93	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=18.250;DP=652;FS=2.599;HRun=6;HaplotypeScore=80.6446;InbreedingCoeff=0.9685;MQ=75.74;MQ0=0;MQRankSum=-0.616;QD=28.22;ReadPosRankSum=-0.130;VQSLOD=5.2771;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:66.17:709,66,0	0/0:11,0:11:26.12:0,26,145	0/0:14,0:14:22.83:0,23,287	0/0:13,0:13:2.27:0,2,40	1/1:2,19:21:54.13:580,54,0	0/0:22,0:22:66.20:0,66,854	0/0:24,0:24:66.21:0,66,868	1/1:1,35:36:96.23:1024,96,0	0/0:26,0:26:75.24:0,75,973	0/0:30,0:30:75.24:0,75,986	0/0:18,0:18:51.15:0,51,656	0/0:24,0:24:69.22:0,69,907	0/0:26,0:26:75.24:0,75,987	0/0:32,0:32:93.29:0,93,1208	0/0:22,0:22:63.20:0,63,829	0/0:29,0:29:84.26:0,84,1090	0/0:22,0:22:63.19:0,63,814	0/0:8,0:8:24.08:0,24,313	1/1:3,16:19:48.12:516,48,0	1/1:2,49:51:99:1450,135,0	1/1:2,11:13:30.07:322,30,0	0/0:21,0:21:57.17:0,57,729	0/0:15,0:15:39.13:0,39,513	0/0:22,0:22:63.20:0,63,829	0/0:27,0:27:78.25:0,78,1015	1/1:2,29:31:50.74:889,51,0	1/1:2,37:39:99:1193,111,0	1/1:0,11:11:24.06:258,24,0
chr10	69896896	.	T	TC	308.16	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=0.951;DP=646;FS=4.048;HRun=1;HaplotypeScore=105.9266;InbreedingCoeff=0.8325;MQ=70.71;MQ0=0;MQRankSum=1.466;QD=17.12;ReadPosRankSum=-0.379;VQSLOD=3.7575;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.06:0,66,336	1/1:0,9:9:27.09:394,27,0	0/0:10,0:11:13.33:0,13,237	0/1:9,0:9:0.11:19,0,0	0/0:21,0:21:57.74:0,58,313	0/0:22,0:22:66.16:0,66,823	0/0:24,0:24:72.22:0,72,908	0/0:37,0:37:91.99:0,92,480	0/0:28,0:28:78.22:0,78,971	0/0:26,0:26:78.24:0,78,988	0/0:18,0:18:51.16:0,51,646	0/0:23,0:23:69.22:0,69,893	0/0:27,0:27:81.21:0,81,1004	0/0:32,0:32:96.29:0,96,1216	0/0:25,0:25:72.19:0,72,878	0/0:29,0:29:87.27:0,87,1102	0/0:23,0:23:66.19:0,66,827	0/0:10,0:10:30.05:0,30,355	0/0:19,0:19:54.97:0,55,316	0/0:50,0:50:99:0,132,675	0/0:12,0:12:28.75:0,29,146	0/0:21,0:21:60.16:0,60,732	0/0:14,0:14:42.13:0,42,532	0/0:22,0:22:66.16:0,66,807	0/0:25,0:25:75.24:0,75,972	0/0:31,0:31:86.48:0,86,475	0/0:40,0:40:99:0,115,616	0/0:12,0:12:25.95:0,26,140
chr10	69898266	.	ACT	A	5480.04	PASS	AB=0.523;AC=11;AF=0.196;AN=56;BaseQRankSum=12.544;DP=596;FS=5.087;HRun=0;HaplotypeScore=71.2342;InbreedingCoeff=0.8876;MQ=89.12;MQ0=0;MQRankSum=-3.289;QD=40.00;ReadPosRankSum=3.073;VQSLOD=7.0139;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.21:0,72,1321	0/0:8,0:8:24.05:0,24,398	0/0:24,0:24:69.19:0,69,1216	0/0:24,0:22:59.71:0,60,1071	0/0:27,0:27:72.25:0,72,1372	0/0:27,0:27:78.18:0,78,1436	0/0:15,0:15:42.14:0,42,793	0/0:33,0:33:96.31:0,96,1776	0/0:26,0:26:75.24:0,75,1406	0/0:18,0:18:51.17:0,51,954	0/0:19,0:19:57.18:0,57,1068	0/0:21,0:21:63.19:0,63,1142	0/0:21,0:21:63.22:0,63,1215	0/0:32,0:32:96.32:0,96,1802	0/0:27,0:27:81.24:0,81,1517	0/0:15,0:15:45.14:0,45,829	0/0:18,0:18:54.16:0,54,1005	0/0:11,0:11:33.11:0,33,632	1/1:0,24:24:72.22:1046,72,0	1/1:1,24:25:69.23:1048,69,0	1/1:0,18:18:42.14:643,42,0	0/0:8,0:8:24.08:0,24,457	0/0:17,0:17:51.17:0,51,974	0/0:20,0:20:60.21:0,60,1148	0/0:24,0:24:72.22:0,72,1319	0/1:3,31:34:16.62:1320,0,17	1/1:0,26:26:71.77:1102,72,0	1/1:0,10:10:21.07:321,21,0
chr10	69899916	.	G	GAT	14740.91	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-3.664;DP=598;FS=2.127;HRun=0;HaplotypeScore=103.0344;InbreedingCoeff=0.9955;MQ=91.88;MQ0=0;MQRankSum=-10.618;QD=55.00;ReadPosRankSum=0.859;VQSLOD=5.1662;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:81.28:1596,81,0	1/1:2,13:15:42.14:844,42,0	0/0:36,0:36:99:0,99,1513	0/0:21,0:21:57.15:0,57,854	1/1:4,19:23:60.12:1116,60,0	0/0:19,0:19:57.19:0,57,930	0/0:20,0:20:60.20:0,60,973	1/1:0,31:31:87.75:1665,88,0	0/0:18,0:18:54.18:0,54,872	0/0:25,0:25:68.82:0,69,1116	0/0:25,0:25:75.26:0,75,1217	0/0:23,0:23:66.22:0,66,1076	0/0:26,0:26:78.27:0,78,1272	0/0:17,0:17:51.17:0,51,829	0/0:30,0:30:87.28:0,87,1394	0/0:24,0:23:72.25:0,72,1167	1/1:0,12:12:30.10:608,30,0	1/1:0,6:6:15.05:304,15,0	1/1:2,21:23:69.22:1344,69,0	1/1:1,32:34:99:1967,99,0	1/1:0,12:12:30.10:607,30,0	0/0:32,0:32:96.28:0,96,1475	1/1:0,5:5:15.05:303,15,0	1/1:2,15:17:42.14:837,42,0	0/0:14,0:14:42.14:0,42,685	1/1:2,24:26:72.25:1421,72,0	1/1:1,21:22:63.22:1277,63,0	1/1:0,14:14:42.14:851,42,0
chr10	69899963	.	CTG	C	6160.58	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=18.857;DP=576;FS=3.820;HRun=0;HaplotypeScore=141.5496;InbreedingCoeff=0.9924;MQ=89.22;MQ0=0;MQRankSum=-18.492;QD=26.90;ReadPosRankSum=1.104;VQSLOD=6.1779;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:57.13:615,57,0	1/1:1,11:12:33.09:365,33,0	0/0:20,0:20:49.41:0,49,873	0/0:34,0:34:88.43:0,88,1688	1/1:2,18:20:54.12:562,54,0	0/0:24,0:24:72.23:0,72,1328	0/0:22,0:22:66.21:0,66,1242	1/1:8,21:29:63.17:706,63,0	0/0:19,0:19:54.19:0,54,1024	0/0:27,0:27:75.26:0,75,1449	0/0:21,0:21:63.22:0,63,1206	0/0:26,0:26:75.26:0,75,1404	0/0:35,0:35:99:0,105,1923	0/0:25,0:25:75.24:0,75,1374	0/0:27,0:27:81.26:0,81,1531	0/0:23,0:22:69.24:0,69,1312	1/1:1,7:8:21.05:227,21,0	1/1:0,5:5:15.04:167,15,0	1/1:4,11:15:33.10:384,33,0	1/1:4,21:25:63.16:682,63,0	1/1:3,4:7:12.03:128,12,0	0/0:22,0:22:63.22:0,63,1217	1/1:0,15:15:45.09:464,45,0	1/1:4,12:16:31.43:315,31,0	0/0:22,0:22:63.20:0,63,1183	1/1:3,23:26:72.19:792,72,0	1/1:5,15:20:48.12:514,48,0	1/1:0,7:7:21.06:238,21,0
chr10	69899967	.	AAGAC	A	8663.08	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=18.754;DP=538;FS=3.308;HRun=0;HaplotypeScore=144.2710;InbreedingCoeff=0.9924;MQ=91.08;MQ0=0;MQRankSum=-18.740;QD=45.12;ReadPosRankSum=1.702;VQSLOD=5.4191;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:50.74:709,51,0	1/1:0,11:11:33.11:516,33,0	0/0:18,0:18:48.14:0,48,1235	0/0:35,0:35:99:0,99,2598	1/1:0,18:18:54.18:826,54,0	0/0:29,0:29:87.30:0,87,2387	0/0:23,0:23:69.22:0,69,1797	1/1:0,21:21:60.20:961,60,0	0/0:17,0:17:51.18:0,51,1391	0/0:26,0:26:75.26:0,75,2099	0/0:20,0:20:60.21:0,60,1669	0/0:22,0:22:66.23:0,66,1812	0/0:35,0:35:99:0,105,2925	0/0:26,0:26:78.27:0,78,2168	0/0:27,0:27:81.28:0,81,2267	0/0:25,0:24:75.26:0,75,2052	1/1:0,7:7:21.07:326,21,0	1/1:0,5:5:15.05:237,15,0	1/1:0,11:11:33.11:544,33,0	1/1:0,21:21:63.21:996,63,0	1/1:0,4:4:12.04:184,12,0	0/0:21,0:21:63.22:0,63,1764	1/1:0,15:15:45.15:693,45,0	1/1:0,12:12:33.11:499,33,0	0/0:22,0:22:66.22:0,66,1775	1/1:1,23:24:72.25:1136,72,0	1/1:0,15:15:45.15:700,45,0	1/1:0,7:7:21.07:336,21,0
chr10	69900603	.	GCA	G	1187.55	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=5.390;DP=513;FS=165.418;HRun=0;HaplotypeScore=84.8844;InbreedingCoeff=0.4973;MQ=71.42;MQ0=18;MQRankSum=-2.688;QD=8.13;ReadPosRankSum=-3.844;VQSLOD=-0.1931;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:9.32:0,9,119	0/1:8,0:8:2.05:2,0,83	0/0:47,0:24:56.70:0,57,1107	0/0:39,0:13:24.38:0,24,492	0/1:14,0:14:4.30:4,0,48	0/0:20,0:19:54.18:0,54,999	0/0:21,0:21:60.16:0,60,1051	0/1:32,0:29:40.96:41,0,102	0/0:18,0:18:45.12:0,45,738	0/0:24,0:23:69.19:0,69,1243	0/0:8,0:7:21.07:0,21,377	0/0:14,0:13:36.11:0,36,607	0/0:30,1:30:60.27:0,60,1350	0/0:24,0:21:52.73:0,53,1022	0/0:28,0:28:38.78:0,39,828	0/0:17,0:17:15.57:0,16,765	1/1:15,0:15:33.06:437,33,0	1/1:5,2:7:17.98:210,18,0	0/1:14,0:14:11.46:11,0,80	0/0:12,0:12:0.28:0,0,26	0/1:12,0:11:3.34:3,0,4	0/0:12,0:12:27.08:0,27,459	1/1:13,0:13:27.07:363,27,0	1/1:15,1:16:21.03:274,21,0	0/0:9,0:8:21.07:0,21,373	0/0:18,0:17:4.24:0,4,158	0/1:11,0:11:0.15:0,0,109	1/1:4,0:2:3.11:8,3,0
chr10	69900604	.	C	CGTGTGTGTGTGTGT	2331.55	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=3.342;DP=519;FS=20.741;HRun=0;HaplotypeScore=186.0952;InbreedingCoeff=0.5608;MQ=70.84;MQ0=24;MQRankSum=-1.551;QD=12.47;ReadPosRankSum=-4.451;VQSLOD=0.2172;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:18.36:237,0,18	0/1:8,0:8:5.91:6,0,207	0/0:47,0:24:43.43:0,43,889	0/0:39,0:13:30.26:0,30,372	0/1:14,0:14:9.50:94,0,10	0/0:21,0:20:54.17:0,54,1738	0/0:22,0:22:55.83:0,56,1591	0/1:31,0:28:9.70:225,0,10	0/0:17,0:17:42.09:0,42,1145	0/0:25,0:23:66.19:0,66,1558	0/0:9,0:7:21.03:0,21,520	0/0:15,0:14:36.11:0,36,805	0/0:32,0:31:86.58:0,87,2047	0/0:23,0:21:60.17:0,60,1749	0/0:29,0:28:78.24:0,78,2207	0/0:17,0:17:48.09:0,48,1214	1/1:15,0:15:13.92:109,14,0	1/1:7,0:7:8.84:179,9,0	1/1:14,0:14:13.83:364,14,0	1/1:11,0:11:8.07:79,8,0	0/0:6,5:11:3.35:0,3,11	0/0:12,0:12:27.08:0,27,965	1/1:12,0:12:7.41:107,7,0	1/1:17,0:16:8.27:125,8,0	0/0:9,0:8:21.03:0,21,300	0/1:18,0:17:5.95:597,0,6	1/1:11,0:11:19.08:395,19,0	1/1:4,0:2:0.47:1,0,0
chr10	69900638	.	TGAGAGAGAGAGAGAGAGA	T	685.10	PASS	AB=0.792;AC=8;AF=0.167;AN=48;BaseQRankSum=4.890;DP=492;FS=21.389;HRun=0;HaplotypeScore=204.1790;InbreedingCoeff=0.1859;MQ=44.10;MQ0=25;MQRankSum=-3.224;QD=5.15;ReadPosRankSum=-3.038;VQSLOD=0.9136;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,7:20:5.92:0,6,40	0/0:8,0:10:9.64:0,10,151	./.	./.	0/1:16,9:24:0:0,0,0	0/0:22,0:21:14.98:0,15,599	0/0:29,0:27:5.95:0,6,43	0/1:23,9:29:9.65:274,0,10	0/0:19,0:18:26.52:0,27,1222	0/0:19,0:27:48.01:0,48,1069	0/0:6,0:15:6.89:0,7,102	0/0:20,0:19:24.08:0,24,1141	0/0:25,0:24:26.30:0,26,828	0/0:27,0:23:30.18:0,30,828	0/0:29,0:27:22.27:0,22,612	0/1:17,0:18:18.12:18,0,241	0/0:6,0:11:5.91:0,6,44	0/1:5,0:5:11:120,0,11	1/1:8,0:10:6.02:170,6,0	./.	0/0:10,0:6:6.02:0,6,278	0/0:13,0:20:15.02:0,15,458	0/0:7,0:13:0:0,0,0	0/1:15,0:24:0:0,0,0	0/0:6,0:14:3.01:0,3,92	0/1:11,0:14:99:216,0,191	0/0:12,0:14:4.88:0,5,90	./.
chr10	69903026	.	GAC	G	1079.72	PASS	AB=0.873;AC=24;AF=0.500;AN=48;BaseQRankSum=4.006;DP=517;FS=4.865;HRun=0;HaplotypeScore=80.6949;InbreedingCoeff=0.3881;MQ=64.77;MQ0=37;MQRankSum=-1.130;QD=4.67;ReadPosRankSum=2.443;VQSLOD=1.9039;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:18,4:21:7.04:95,0,7	0/0:12,0:11:9.02:0,9,105	./.	./.	0/1:20,0:19:11.17:11,0,188	0/0:18,0:19:9.11:0,9,188	0/1:11,2:13:46.59:47,0,159	./.	0/1:6,1:7:23.30:23,0,79	0/0:10,0:10:6.02:0,6,89	0/0:14,2:16:12.02:0,12,155	0/0:14,0:14:13.73:0,14,257	0/0:10,0:10:3.01:0,3,44	0/0:6,0:14:15:0,15,131	0/1:15,3:17:5.25:5,0,296	1/1:5,7:14:23.72:222,24,0	1/1:11,5:16:5.51:102,6,0	0/0:13,0:13:14.98:0,15,141	1/1:13,0:14:5.68:28,6,0	1/1:15,0:20:8.52:42,9,0	./.	0/1:8,3:11:49.60:50,0,116	1/1:6,4:11:8.10:77,8,0	1/1:11,12:23:35.92:369,36,0	0/0:14,0:14:14.86:0,15,153	1/1:7,0:13:14.20:70,14,0	1/1:9,0:15:11.36:56,11,0	1/1:3,0:7:11.36:56,11,0
chr10	69903030	.	C	CAT	579.67	PASS	AB=0.894;AC=6;AF=0.107;AN=56;BaseQRankSum=1.539;DP=540;FS=2.891;HRun=0;HaplotypeScore=89.8303;InbreedingCoeff=0.2507;MQ=64.04;MQ0=38;MQRankSum=1.472;QD=6.23;ReadPosRankSum=-0.319;VQSLOD=2.7302;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:22:38.23:270,38,0	0/0:11,0:10:21.83:0,22,228	0/0:56,0:12:23.26:0,23,187	0/0:72,0:18:11.66:0,12,121	0/1:20,0:19:45.87:211,0,46	0/0:21,0:21:30.37:0,30,383	0/0:17,0:17:26.51:0,27,305	0/0:21,0:20:53.86:0,54,451	0/0:8,0:8:20.99:0,21,213	0/0:12,0:12:36.02:0,36,359	0/0:18,0:18:41.76:0,42,392	0/0:13,0:13:38.95:0,39,434	0/0:10,0:10:24.54:0,25,199	0/1:15,0:15:67.31:67,0,93	0/0:21,0:19:28.81:0,29,496	0/0:15,0:15:38.91:0,39,313	0/1:20,0:18:8.51:9,0,206	0/1:4,11:15:45:152,0,45	0/0:15,0:14:41.56:0,42,319	0/0:20,0:20:47.64:0,48,360	0/0:14,0:12:17.94:0,18,142	0/0:13,0:13:32.91:0,33,343	0/0:12,0:12:21.43:0,21,171	0/0:23,0:22:56.86:0,57,457	0/0:17,0:17:15.97:0,16,274	0/0:15,0:14:38.84:0,39,304	0/0:16,0:15:29.83:0,30,224	0/0:7,0:7:17.69:0,18,119
chr10	69903130	.	A	AAT	1375.16	PASS	AB=0.736;AC=5;AF=0.089;AN=56;BaseQRankSum=-5.316;DP=400;FS=11.133;HRun=0;HaplotypeScore=69.6156;InbreedingCoeff=-0.0539;MQ=81.58;MQ0=1;MQRankSum=-0.210;QD=13.75;ReadPosRankSum=0.686;VQSLOD=2.3216;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,10:16:46.02:295,0,46	0/0:3,0:7:11.20:0,11,53	0/0:16,0:12:16.73:0,17,189	0/1:32,0:20:17.14:17,0,175	0/1:6,19:25:17.05:752,0,17	0/0:26,0:26:69.22:0,69,852	0/0:5,0:5:15.05:0,15,186	0/0:6,0:32:69.87:0,70,334	0/0:2,0:2:6.02:0,6,74	0/0:16,0:17:35.93:0,36,412	0/0:19,0:20:47.98:0,48,570	0/0:6,0:6:18.06:0,18,223	0/0:12,0:13:35.94:0,36,423	0/0:8,0:8:21.06:0,21,258	0/0:6,0:6:15.05:0,15,186	0/0:11,0:11:30.08:0,30,359	0/0:34,0:35:93.09:0,93,1113	0/1:3,9:12:7.09:412,0,7	0/0:16,0:17:41.96:0,42,486	0/1:13,1:14:13.45:13,0,333	0/0:4,0:4:9.01:0,9,98	0/0:2,0:2:3.01:0,3,37	0/0:8,0:8:21.07:0,21,260	0/0:5,0:5:9.03:0,9,112	0/0:8,0:8:21.07:0,21,260	0/0:15,0:15:39.12:0,39,476	0/0:20,0:20:41.16:0,41,619	0/0:17,0:17:45.14:0,45,554
chr10	69903175	.	CTGTT	C	5641.33	PASS	AB=0.523;AC=15;AF=0.268;AN=56;BaseQRankSum=10.586;DP=508;FS=2.604;HRun=0;HaplotypeScore=89.7352;InbreedingCoeff=0.9102;MQ=71.12;MQ0=2;MQRankSum=-2.855;QD=38.38;ReadPosRankSum=0.841;VQSLOD=4.9806;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.10:0,63,1397	1/1:1,7:8:20.74:342,21,0	0/0:19,0:18:39.13:0,39,901	0/0:13,0:12:33.09:0,33,732	0/0:25,0:25:69.21:0,69,1654	0/0:32,0:32:87.28:0,87,2069	0/0:14,0:14:36.12:0,36,892	1/1:9,18:27:60.20:1033,60,0	0/0:12,0:12:36.12:0,36,855	0/0:23,0:23:66.23:0,66,1653	0/0:22,0:22:54.19:0,54,1365	0/0:14,0:14:42.13:0,42,1021	0/0:23,0:23:66.23:0,66,1665	0/0:12,0:12:36.12:0,36,918	0/0:13,0:13:36.12:0,36,920	0/0:14,0:14:42.14:0,42,1034	0/0:36,0:35:72.25:0,72,1785	0/0:13,0:13:36.12:0,36,845	1/1:5,14:19:39.12:636,39,0	1/1:5,21:26:60.16:1025,60,0	1/1:1,10:11:24.08:424,24,0	0/0:13,0:13:39.13:0,39,991	0/0:13,0:13:36.11:0,36,863	0/0:13,0:13:39.13:0,39,996	0/0:13,0:13:36.11:0,36,848	0/1:2,21:22:13.46:996,0,13	1/1:4,18:22:51.13:867,51,0	1/1:5,6:11:18.06:318,18,0
chr10	69903842	.	T	TA	4162.65	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-12.628;DP=629;FS=0.363;HRun=8;HaplotypeScore=58.9347;InbreedingCoeff=0.9665;MQ=80.36;MQ0=0;MQRankSum=-0.440;QD=26.02;ReadPosRankSum=-2.801;VQSLOD=3.2637;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:72.02:0,72,658	1/1:0,7:7:15:158,15,0	0/0:20,0:20:44.98:0,45,402	0/0:16,0:16:9.83:0,10,172	0/0:23,0:23:60.02:0,60,549	0/0:24,0:24:72.04:0,72,659	0/0:23,0:23:66.03:0,66,604	1/1:3,22:25:44.21:683,44,0	0/0:20,0:20:48.02:0,48,439	0/0:31,0:31:84.03:0,84,767	0/0:21,0:21:56.95:0,57,508	0/0:25,0:25:68.99:0,69,619	0/0:25,0:25:66.03:0,66,604	0/0:20,0:20:54:0,54,485	0/0:25,0:25:69.03:0,69,632	0/0:28,0:28:78.02:0,78,709	0/0:24,0:24:72.04:0,72,659	0/0:29,0:29:65.95:0,66,588	1/1:7,20:27:57.17:658,57,0	1/1:2,21:23:38.62:668,39,0	1/1:0,14:14:33.10:381,33,0	0/0:12,0:12:36.02:0,36,329	0/0:28,0:28:84.05:0,84,769	0/0:24,0:24:63.02:0,63,577	0/0:19,0:19:54.01:0,54,488	1/1:8,26:34:4.86:818,5,0	1/1:5,16:22:50.96:555,51,0	1/1:0,8:8:21.06:242,21,0
chr10	69903987	.	AGTGAGTGTGTGTGT	A	3780.91	PASS	AB=0.818;AC=15;AF=0.268;AN=56;BaseQRankSum=5.442;DP=711;FS=9.434;HRun=0;HaplotypeScore=245.7690;InbreedingCoeff=0.8284;MQ=54.10;MQ0=15;MQRankSum=-2.437;QD=20.55;ReadPosRankSum=-4.657;VQSLOD=0.1906;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:30.25:0,30,318	1/1:0,0:10:2.61:105,3,0	0/0:20,0:9:15:0,15,139	0/0:23,0:12:10.48:0,10,110	0/0:28,0:26:39.10:0,39,680	0/0:18,0:16:36.06:0,36,1045	0/0:30,0:30:62.06:0,62,917	1/1:6,0:31:38.66:607,39,0	0/0:30,0:30:66.09:0,66,1399	0/0:21,0:20:60.13:0,60,1127	0/0:20,0:19:42.09:0,42,1281	0/0:35,0:35:78.98:0,79,1898	0/0:28,0:27:66.16:0,66,1915	0/0:19,0:18:14.11:0,14,691	0/0:36,0:36:85.93:0,86,2186	0/0:17,0:16:33.05:0,33,673	0/0:31,0:30:57.52:0,58,1867	0/0:16,0:16:41.96:0,42,600	1/1:17,0:15:35.90:356,36,0	1/1:20,2:22:38.63:623,39,0	1/1:5,54:59:3.01:51,3,0	0/0:24,0:23:41.79:0,42,934	0/0:23,0:22:41.94:0,42,1053	0/0:39,0:38:83.61:0,84,2064	0/0:30,0:29:66.11:0,66,1831	1/1:3,14:16:36.05:714,36,0	1/1:12,4:15:36.04:896,36,0	0/1:7,2:8:39.60:429,0,40
chr10	69903991	.	AGT	A	3202.40	PASS	AB=0.817;AC=39;AF=0.750;AN=52;BaseQRankSum=-3.731;DP=697;FS=7.282;HRun=0;HaplotypeScore=130.1288;InbreedingCoeff=0.3771;MQ=53.25;MQ0=17;MQRankSum=1.486;QD=5.58;ReadPosRankSum=3.066;VQSLOD=2.7420;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:39,1:39:6.01:64,6,0	1/1:10,0:10:2.82:14,3,0	./.	./.	0/0:28,0:25:8.48:0,8,64	0/1:11,5:15:27.67:108,0,28	0/1:25,8:33:20.99:55,0,21	0/0:33,0:31:20.39:0,20,140	1/1:19,11:31:20.85:213,21,0	1/1:21,1:21:13.84:102,14,0	1/1:13,8:20:2.51:181,3,0	1/1:20,14:36:26.74:261,27,0	1/1:10,17:27:26.27:397,26,0	1/1:12,6:17:5.93:67,6,0	1/1:24,10:35:17.82:180,18,0	1/1:10,6:16:0.94:89,1,0	1/1:13,17:32:33.45:427,33,0	0/0:15,0:15:6.01:0,6,64	0/0:16,0:14:2.97:0,3,20	0/1:17,0:22:4.70:20,0,5	0/1:62,0:62:0:0,0,0	1/1:15,7:21:8.86:80,9,0	0/1:13,6:20:0.75:148,0,1	1/1:23,14:37:35.53:376,36,0	1/1:12,15:27:32.92:347,33,0	1/1:15,0:14:8.59:59,9,0	1/1:11,0:15:17.82:110,18,0	1/1:9,0:8:8.53:53,9,0
chr10	69904020	.	GTGTGTGTGTA	G	926.64	PASS	AB=0.941;AC=11;AF=0.196;AN=56;BaseQRankSum=8.113;DP=734;FS=3.631;HRun=0;HaplotypeScore=217.4195;InbreedingCoeff=0.2493;MQ=56.49;MQ0=24;MQRankSum=-7.467;QD=5.15;ReadPosRankSum=2.909;VQSLOD=2.7418;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,27:33:3.97:32,4,0	0/1:10,0:10:17.98:45,0,18	0/0:38,0:19:43.97:0,44,638	0/0:47,0:21:50.35:0,50,684	0/1:6,14:18:2.16:17,0,2	0/0:17,0:15:36.02:0,36,848	0/0:30,0:30:53.44:0,53,662	0/1:39,0:37:1.87:2,0,379	0/0:27,0:27:54.09:0,54,890	0/0:25,0:24:63.05:0,63,863	0/0:18,0:17:36.04:0,36,816	0/0:33,0:33:66.14:0,66,1153	0/0:32,0:31:63.14:0,63,1325	0/0:21,0:20:45.01:0,45,683	0/0:25,0:25:54.05:0,54,969	0/0:18,0:17:41.60:0,42,551	0/0:38,0:37:83.31:0,83,1590	1/1:14,0:14:25.82:315,26,0	0/0:15,0:13:28.06:0,28,223	0/1:20,0:20:99:110,0,131	0/0:72,0:72:44.15:0,44,355	0/0:18,0:17:30.04:0,30,497	0/0:18,0:17:32.97:0,33,652	0/0:41,0:40:83.96:0,84,1609	0/0:21,0:20:45.13:0,45,1073	0/1:16,0:16:99:134,0,113	0/1:19,0:19:99:283,0,111	0/1:8,0:7:89.22:139,0,89
chr10	69906382	.	TA	T	670.68	PASS	AB=0.982;AC=13;AF=0.232;AN=56;BaseQRankSum=14.867;DP=647;FS=5.127;HRun=4;HaplotypeScore=85.1433;InbreedingCoeff=0.7097;MQ=88.69;MQ0=0;MQRankSum=-3.045;QD=4.06;ReadPosRankSum=0.925;VQSLOD=-0.2434;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,1584	1/1:6,0:6:11.49:39,11,0	0/0:30,0:28:78.22:0,78,1006	0/0:23,0:23:62.80:0,63,771	0/0:16,0:16:42.14:0,42,587	0/0:22,0:22:66.18:0,66,858	0/0:29,0:29:84.25:0,84,1137	0/1:32,0:32:55.80:90,0,56	0/0:29,0:29:87.27:0,87,1197	0/0:24,0:24:72.22:0,72,964	0/0:16,0:16:45.12:0,45,609	0/0:28,0:28:81.26:0,81,1114	0/0:28,0:28:81.20:0,81,1064	0/0:24,0:24:72.20:0,72,946	0/0:27,0:27:81.25:0,81,1101	0/0:16,0:16:48.16:0,48,660	0/0:34,0:34:99:0,102,1346	0/0:14,0:13:42.10:0,42,564	1/1:16,0:15:9.86:79,10,0	1/1:26,1:27:9.99:142,10,0	0/1:21,0:21:2.62:94,0,3	0/0:16,0:16:48.13:0,48,626	0/0:17,0:17:51.14:0,51,676	0/0:29,0:29:87.22:0,87,1127	0/0:18,0:18:54.14:0,54,685	1/1:17,0:17:28.70:92,29,0	0/1:34,2:36:29.99:198,0,30	1/1:8,2:10:18.49:113,18,0
chr10	69906386	.	AC	A	4590.13	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.763;DP=648;FS=11.146;HRun=5;HaplotypeScore=72.0780;InbreedingCoeff=0.9919;MQ=87.05;MQ0=0;MQRankSum=-0.627;QD=28.69;ReadPosRankSum=-1.432;VQSLOD=3.9423;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,1498	1/1:1,6:7:10.01:163,10,0	0/0:28,0:26:72.22:0,72,945	0/0:22,0:22:60.10:0,60,768	0/0:15,0:15:45.12:0,45,583	0/0:21,0:21:54.17:0,54,720	0/0:29,0:29:81.24:0,81,1073	1/1:4,27:31:78.15:838,78,0	0/0:31,0:31:93.28:0,93,1236	0/0:22,0:22:63.21:0,63,861	0/0:15,0:15:42.14:0,42,563	0/0:28,0:28:81.25:0,81,1090	0/0:28,0:28:81.24:0,81,1064	0/0:26,0:26:75.10:0,75,951	0/0:29,0:29:81.24:0,81,1073	0/0:19,0:19:57.14:0,57,727	0/0:34,0:34:93.30:0,93,1253	0/0:15,0:14:42.05:0,42,533	1/1:0,16:16:45.10:492,45,0	1/1:2,22:24:66.13:731,66,0	1/1:2,17:19:52.03:580,52,0	0/0:17,0:17:48.13:0,48,623	0/0:19,0:19:48.13:0,48,612	0/0:30,0:30:78.24:0,78,1047	0/0:20,0:20:51.13:0,51,649	1/1:0,19:19:56.89:584,57,0	1/1:5,29:34:81.16:902,81,0	1/1:6,4:10:30.04:300,30,0
chr10	69907516	.	G	GT	8466.58	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.548;DP=803;FS=6.443;HRun=3;HaplotypeScore=98.3933;InbreedingCoeff=0.9700;MQ=82.85;MQ0=0;MQRankSum=-1.651;QD=38.48;ReadPosRankSum=-1.517;VQSLOD=3.8816;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1389	1/1:0,15:15:39.09:524,39,0	0/0:40,0:45:42.57:0,43,1011	0/0:26,0:31:23.06:0,23,685	0/0:17,0:17:51.16:0,51,612	0/0:22,0:22:63.19:0,63,755	0/0:33,0:33:93.27:0,93,1104	1/1:1,40:42:99:1590,117,0	0/0:23,0:23:63.19:0,63,756	0/0:31,0:31:93.29:0,93,1116	0/0:24,0:24:72.20:0,72,851	0/0:33,0:33:99:0,99,1187	0/0:27,0:27:78.24:0,78,936	0/0:30,0:30:81.23:0,81,956	0/0:37,0:37:99:0,108,1296	0/0:32,0:32:96.29:0,96,1152	0/0:25,0:25:72.20:0,72,849	0/0:21,0:21:63.19:0,63,754	1/1:1,18:19:54.18:756,54,0	1/1:0,33:33:99:1364,99,0	1/1:4,35:39:99:1429,102,0	0/0:31,0:31:93.27:0,93,1102	0/0:27,0:27:75.23:0,75,897	0/0:32,0:32:83.59:0,84,994	0/0:22,0:22:60.17:0,60,708	1/1:3,24:27:39.24:965,39,0	1/1:0,44:44:99:1796,129,0	1/1:0,1:1:3.01:42,3,0
chr10	69908072	.	GA	G	3985.36	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.861;DP=528;FS=8.018;HRun=8;HaplotypeScore=67.5589;InbreedingCoeff=0.9846;MQ=77.32;MQ0=1;MQRankSum=0.395;QD=24.75;ReadPosRankSum=-0.723;VQSLOD=3.9759;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.23:0,75,906	1/1:2,5:7:15.02:145,15,0	0/0:10,0:9:10.05:0,10,138	0/0:14,0:15:20.24:0,20,202	0/0:35,0:35:96.27:0,96,1135	0/0:29,0:29:81.25:0,81,979	0/0:14,0:14:39.12:0,39,471	1/1:3,26:29:78.10:746,78,0	0/0:22,0:22:60.17:0,60,713	0/0:20,0:20:60.18:0,60,725	0/0:22,0:22:63.19:0,63,761	0/0:10,0:10:24.07:0,24,290	0/0:19,0:19:51.15:0,51,606	0/0:17,0:17:51.16:0,51,616	0/0:22,0:22:48.14:0,48,570	0/0:14,0:14:39.11:0,39,459	0/0:19,0:19:45.14:0,45,544	0/0:21,0:21:57.17:0,57,681	1/1:1,21:22:63.10:608,63,0	1/1:3,28:31:81.12:782,81,0	1/1:0,10:10:30.05:290,30,0	0/0:7,0:7:21.06:0,21,254	0/0:15,0:15:39.12:0,39,471	0/0:9,0:9:27.08:0,27,326	0/0:20,0:20:51.16:0,51,616	1/1:5,20:25:29.02:545,29,0	1/1:4,27:31:75.12:724,75,0	1/1:1,5:6:15.02:145,15,0
chr10	69909896	.	AACACACACACACAC	A	1997.88	PASS	AB=0.738;AC=12;AF=0.231;AN=52;BaseQRankSum=7.137;DP=451;FS=12.658;HRun=0;HaplotypeScore=157.0722;InbreedingCoeff=0.3638;MQ=63.29;MQ0=18;MQRankSum=-4.145;QD=14.69;ReadPosRankSum=-0.081;VQSLOD=1.9347;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,1:32:47.91:94,0,48	0/0:4,0:4:3.01:0,3,178	./.	0/0:33,0:18:6.02:0,6,91	0/1:11,1:19:26.93:188,0,27	0/0:23,0:20:36.12:0,36,2024	0/0:9,0:9:9.03:0,9,495	0/0:15,0:14:12.04:0,12,490	0/0:11,0:14:21.07:0,21,1250	0/0:14,0:15:33.11:0,33,1585	0/0:14,0:14:27.08:0,27,1385	0/0:16,0:15:24.08:0,24,1412	0/0:10,0:9:24.08:0,24,1374	0/0:13,0:13:9.03:0,9,466	0/0:12,0:13:27.09:0,27,1460	0/0:16,0:19:33.11:0,33,1669	0/0:21,0:20:23.47:0,23,905	0/1:8,1:11:99:192,0,123	1/1:15,1:16:1.01:113,1,0	1/1:7,7:15:18.02:474,18,0	./.	0/0:8,0:8:15.03:0,15,679	0/0:10,0:10:9.03:0,9,569	0/0:12,0:12:6.02:0,6,380	0/0:17,0:19:36.11:0,36,1830	0/1:10,8:16:99:495,0,128	1/1:9,6:16:15.93:568,16,0	1/1:7,0:7:2.99:25,3,0
chr10	69914566	.	CAGA	C	6311.02	PASS	AB=0.537;AC=11;AF=0.196;AN=56;BaseQRankSum=14.312;DP=771;FS=6.165;HRun=0;HaplotypeScore=108.3606;InbreedingCoeff=0.8850;MQ=85.88;MQ0=0;MQRankSum=-2.041;QD=39.69;ReadPosRankSum=1.888;VQSLOD=6.0171;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.28:0,81,1868	0/0:15,0:15:42.14:0,42,969	0/0:30,0:30:69.28:0,69,1688	0/0:25,0:25:72.25:0,72,1599	0/0:29,0:29:84.27:0,84,1856	0/0:19,0:19:54.18:0,54,1212	0/0:34,0:34:99:0,99,2263	0/0:37,0:37:99:0,108,2452	0/0:34,0:34:96.33:0,96,2175	0/0:24,0:24:69.23:0,69,1545	0/0:23,0:23:69.24:0,69,1556	0/0:22,0:22:63.22:0,63,1449	0/0:36,0:36:99:0,99,2213	0/0:27,0:27:78.25:0,78,1652	0/0:47,0:47:99:0,138,3100	0/0:31,0:31:90.31:0,90,2052	0/0:26,0:26:78.27:0,78,1799	0/0:16,0:16:48.16:0,48,1100	1/1:1,15:16:45.12:696,45,0	1/1:2,21:23:57.15:926,57,0	1/1:1,55:56:99:2198,128,0	0/0:19,0:19:57.20:0,57,1314	0/0:23,0:23:63.22:0,63,1386	0/0:51,0:51:99:0,148,3387	0/0:17,0:17:51.18:0,51,1174	0/1:3,19:22:78.21:855,0,78	1/1:5,29:34:78.27:1329,78,0	1/1:2,6:8:18.06:307,18,0
chr10	69914793	.	TTTGG	T	216.09	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=3.625;DP=525;FS=4.420;HRun=0;HaplotypeScore=107.5124;InbreedingCoeff=0.5644;MQ=74.90;MQ0=7;MQRankSum=2.868;QD=3.00;ReadPosRankSum=-2.482;VQSLOD=1.3914;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:13.77:0,14,200	1/1:5,0:5:12.01:109,12,0	0/1:34,0:13:12.96:13,0,260	0/0:36,0:26:15.36:0,15,289	0/0:34,0:31:43.47:0,43,493	0/0:17,0:17:31.33:0,31,327	0/0:6,0:6:8.85:0,9,68	1/1:8,9:17:19.09:214,19,0	0/0:23,0:23:45.09:0,45,460	0/0:21,0:20:42.95:0,43,349	0/0:16,0:16:21.66:0,22,227	0/0:14,0:14:25.12:0,25,249	0/0:17,0:16:19.49:0,19,189	0/0:19,0:19:46.20:0,46,420	0/0:20,0:20:48.60:0,49,493	0/0:14,0:14:33.73:0,34,377	0/0:16,0:16:23.64:0,24,280	0/0:13,0:13:15.52:0,16,149	0/0:26,0:26:52.72:0,53,594	0/0:39,0:39:64.97:0,65,813	0/0:4,0:4:9.02:0,9,104	0/1:16,0:16:3.85:4,0,203	0/0:13,0:13:26.17:0,26,277	0/0:7,0:7:3.20:0,3,81	0/0:17,0:16:40.67:0,41,324	0/0:25,0:25:59.92:0,60,537	0/0:26,0:24:50.99:0,51,574	0/0:14,0:13:15.87:0,16,114
chr10	69919698	.	CA	C	5475.74	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.162;DP=631;FS=4.740;HRun=2;HaplotypeScore=65.8294;InbreedingCoeff=0.9996;MQ=81.08;MQ0=0;MQRankSum=-1.094;QD=35.33;ReadPosRankSum=3.755;VQSLOD=5.4587;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:87.28:1129,87,0	0/0:9,0:9:27.06:0,27,376	0/0:26,0:26:72.24:0,72,1033	0/0:17,0:17:43.58:0,44,659	1/1:0,17:17:48.16:622,48,0	0/0:16,0:16:48.16:0,48,719	0/0:25,0:25:75.23:0,75,1079	0/0:24,0:24:69.20:0,69,969	0/0:20,0:20:60.20:0,60,897	0/0:16,0:16:48.16:0,48,715	0/0:13,0:13:39.13:0,39,583	0/0:23,0:23:69.23:0,69,1030	0/0:25,0:25:75.25:0,75,1119	0/0:31,0:31:90.30:0,90,1348	0/0:25,0:25:75.25:0,75,1111	0/0:19,0:19:57.18:0,57,835	1/1:1,42:43:99:1471,114,0	1/1:1,29:30:87.28:1129,87,0	0/0:36,0:36:99:0,108,1592	0/0:11,0:11:30.10:0,30,450	0/0:29,0:29:87.29:0,87,1294	0/0:21,0:21:63.17:0,63,901	1/1:0,11:12:33.11:426,33,0	1/1:1,19:20:54.18:699,54,0	0/0:22,0:22:66.22:0,66,987	0/0:26,0:26:78.26:0,78,1169	0/0:30,0:29:90.25:0,90,1266	0/0:12,0:12:36.09:0,36,497
chr10	69920618	.	CT	C	3001.94	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.234;DP=737;FS=1.445;HRun=1;HaplotypeScore=69.0110;InbreedingCoeff=0.9985;MQ=84.79;MQ0=0;MQRankSum=-2.819;QD=37.06;ReadPosRankSum=2.108;VQSLOD=4.1809;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,160,2499	0/0:15,0:15:45.15:0,45,717	0/0:27,0:27:81.09:0,81,1182	0/0:17,0:17:37.41:0,37,706	0/0:29,0:29:87.30:0,87,1373	0/0:19,0:19:57.18:0,57,886	0/0:27,0:27:81.28:0,81,1293	0/0:32,0:32:93.30:0,93,1444	0/0:22,0:22:66.21:0,66,1025	0/0:30,0:29:90.31:0,90,1439	0/0:27,0:27:81.22:0,81,1198	0/0:27,0:27:81.26:0,81,1271	0/0:29,0:29:84.25:0,84,1305	0/0:29,0:29:87.30:0,87,1380	0/0:33,0:33:99:0,99,1551	0/0:24,0:24:72.25:0,72,1145	1/1:0,32:32:87.29:1216,87,0	0/0:28,0:28:84.29:0,84,1324	0/0:23,0:23:56.33:0,56,1007	0/0:26,0:26:75.24:0,75,1175	0/0:28,0:28:84.25:0,84,1291	0/0:28,0:28:84.27:0,84,1312	1/1:0,21:21:56.72:796,57,0	1/1:0,28:28:81.27:1133,81,0	0/0:26,0:26:78.24:0,78,1218	0/0:25,0:25:75.24:0,75,1157	0/0:24,0:24:72.21:0,72,1100	0/0:7,0:7:21.07:0,21,327
chr10	69922980	.	TAA	T	2158.01	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.278;DP=717;FS=1.856;HRun=2;HaplotypeScore=86.8337;InbreedingCoeff=0.9876;MQ=88.67;MQ0=0;MQRankSum=-1.027;QD=41.50;ReadPosRankSum=2.551;VQSLOD=3.8106;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,2366	0/0:14,0:14:42.14:0,42,828	0/0:25,0:25:75.26:0,75,1486	0/0:28,0:28:78.23:0,78,1454	0/0:32,0:32:96.33:0,96,1941	0/0:26,0:26:78.27:0,78,1577	0/0:24,0:24:72.25:0,72,1431	0/0:40,0:40:99:0,120,2361	0/0:22,0:22:66.21:0,66,1279	0/0:35,0:35:99:0,105,2088	0/0:12,0:12:36.12:0,36,723	0/0:27,0:27:81.23:0,81,1581	0/0:28,0:28:84.29:0,84,1678	0/0:37,0:37:99:0,111,2211	0/0:30,0:30:90.30:0,90,1793	0/0:40,0:39:99:0,120,2413	1/1:0,25:25:66.23:1077,66,0	0/0:19,0:19:57.20:0,57,1143	0/0:22,0:22:63.22:0,63,1267	0/0:26,0:26:78.27:0,78,1585	0/0:35,0:35:99:0,102,2026	0/0:30,0:30:90.31:0,90,1780	1/1:0,7:7:21.07:343,21,0	1/1:0,20:20:54.18:881,54,0	0/0:19,0:19:57.20:0,57,1159	0/0:22,0:22:63.22:0,63,1281	0/0:28,0:28:84.29:0,84,1653	0/0:5,0:5:12.04:0,12,244
chr10	69924052	.	A	AC	6123.51	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-14.536;DP=901;FS=4.472;HRun=1;HaplotypeScore=83.3143;InbreedingCoeff=0.9986;MQ=84.76;MQ0=0;MQRankSum=-1.693;QD=38.51;ReadPosRankSum=1.136;VQSLOD=5.4309;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,56:56:99:2022,135,0	1/1:1,8:9:24.08:360,24,0	0/0:33,0:33:95.73:0,96,1131	0/0:34,0:34:73.26:0,73,927	1/1:0,39:39:99:1628,114,0	0/0:28,0:28:81.23:0,81,1021	0/0:30,0:30:87.25:0,87,1096	1/1:3,30:34:90.13:1260,90,0	0/0:39,0:39:99:0,117,1490	0/0:24,0:24:69.22:0,69,881	0/0:28,0:28:84.27:0,84,1090	0/0:41,0:41:99:0,123,1543	0/0:26,0:26:72.23:0,72,935	0/0:39,0:39:99:0,114,1436	0/0:62,0:62:99:0,181,2297	0/0:41,0:41:99:0,120,1478	0/0:32,0:31:96.30:0,96,1229	1/1:0,21:21:57.19:854,57,0	0/0:29,0:29:84.27:0,84,1090	0/0:27,0:27:81.24:0,81,1015	0/0:48,0:48:99:0,141,1830	0/0:24,0:24:72.23:0,72,934	0/0:23,0:23:69.21:0,69,877	0/0:35,0:35:99:0,105,1313	0/0:28,0:28:75.22:0,75,946	0/0:40,0:40:99:0,114,1480	0/0:24,0:24:72.22:0,72,919	0/0:7,0:7:21.07:0,21,272
chr10	69924874	.	CAAACAAACA	C	4193.47	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.043;DP=635;FS=11.351;HRun=0;HaplotypeScore=186.4738;InbreedingCoeff=0.9842;MQ=59.17;MQ0=14;MQRankSum=-7.112;QD=38.47;ReadPosRankSum=-6.177;VQSLOD=0.8036;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:5,17:22:33.11:925,33,0	1/1:0,4:4:9.03:229,9,0	0/0:16,0:14:39.06:0,39,813	0/0:24,0:16:41.86:0,42,879	1/1:0,31:31:75.15:1664,75,0	0/0:25,0:25:66.08:0,66,2462	0/0:23,0:22:60.19:0,60,2400	1/1:28,0:29:74.89:881,75,0	0/0:16,0:16:45.15:0,45,1754	0/0:37,0:37:99:0,108,3993	0/0:18,0:18:48.13:0,48,1580	0/0:12,0:12:36.12:0,36,1456	0/0:22,0:22:63.69:0,64,2711	0/0:25,0:25:66.02:0,66,2068	0/0:17,0:17:48.16:0,48,1664	0/0:20,0:20:54.17:0,54,2205	0/0:32,0:27:61.47:0,61,1827	1/1:1,22:23:18.06:496,18,0	0/0:27,0:25:37.67:0,38,1101	0/0:24,0:23:62.25:0,62,1673	0/0:18,0:18:38.16:0,38,950	0/0:23,0:22:60.20:0,60,2463	0/0:23,0:23:55.36:0,55,1518	0/0:23,0:23:66.18:0,66,1714	0/0:28,0:28:81.28:0,81,3267	0/0:27,0:26:54.51:0,55,1844	0/0:27,0:22:60.13:0,60,1438	0/0:19,0:16:32.22:0,32,956
chr10	69924882	.	CAA	C	5745.01	PASS	AB=0.740;AC=26;AF=0.464;AN=56;BaseQRankSum=13.057;DP=620;FS=15.916;HRun=10;HaplotypeScore=94.1259;InbreedingCoeff=0.8779;MQ=62.38;MQ0=13;MQRankSum=0.669;QD=18.30;ReadPosRankSum=1.947;VQSLOD=2.1421;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:19:0.18:88,0,0	1/1:4,0:4:7.41:30,7,0	0/0:15,0:13:34.90:0,35,456	0/0:20,0:16:38.60:0,39,516	1/1:31,0:31:27.74:146,28,0	0/0:23,0:25:68.72:0,69,1031	0/0:22,0:22:60.19:0,60,911	1/1:0,0:16:34.77:125,35,0	0/0:17,0:17:51.11:0,51,726	0/0:34,0:35:84.24:0,84,1262	0/0:14,0:15:45.15:0,45,670	0/0:14,0:14:39.12:0,39,588	0/0:26,0:26:63.20:0,63,938	0/0:21,0:26:62.27:0,62,853	0/0:16,0:17:48.15:0,48,707	0/0:21,0:21:57.19:0,57,879	1/1:9,24:27:66.17:733,66,0	1/1:23,0:23:14.56:59,15,0	1/1:5,23:26:66.04:709,66,0	1/1:2,24:25:66.16:734,66,0	1/1:2,17:19:36.09:401,36,0	0/0:19,0:19:45.15:0,45,693	1/1:1,20:21:60.16:669,60,0	1/1:3,21:24:54.14:602,54,0	0/0:31,0:31:84.28:0,84,1289	0/1:3,23:25:66.79:621,0,67	1/1:5,20:20:42.11:468,42,0	1/1:2,16:16:27:359,27,0
chr10	69925334	.	ATGG	A	567.22	PASS	AC=22;AF=0.458;AN=48;BaseQRankSum=6.627;DP=408;FS=0.983;HRun=0;HaplotypeScore=71.6433;InbreedingCoeff=0.6800;MQ=66.80;MQ0=4;MQRankSum=-1.071;QD=3.36;ReadPosRankSum=0.441;VQSLOD=1.6756;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:25:5.92:39,6,0	1/1:9,0:9:2.99:23,3,0	./.	./.	1/1:9,0:18:2.94:19,3,0	0/0:14,0:14:18.50:0,18,308	0/0:16,0:16:12.04:0,12,230	./.	0/0:16,0:16:23.43:0,23,358	0/0:10,0:10:5.98:0,6,47	0/0:10,0:10:8.98:0,9,73	0/0:16,0:16:11.25:0,11,162	0/0:16,0:16:18.06:0,18,343	0/0:16,0:16:18.04:0,18,285	0/0:10,0:10:12.02:0,12,186	0/0:13,0:13:18.06:0,18,338	1/1:15,9:24:15.05:197,15,0	1/1:8,0:8:2.64:21,3,0	./.	1/1:11,0:13:2.98:21,3,0	0/0:25,0:25:0:0,0,0	0/0:7,0:7:3.01:0,3,57	1/1:6,4:10:3.01:40,3,0	1/1:11,9:20:11.91:157,12,0	0/0:6,0:6:3.01:0,3,57	1/1:11,0:16:14.57:93,15,0	1/1:9,0:13:8.93:63,9,0	1/1:5,0:12:8.93:63,9,0
chr10	69929033	.	A	AGAGAGG	573.96	PASS	AB=1.000;AC=8;AF=0.148;AN=54;BaseQRankSum=-0.429;DP=438;FS=0.000;HRun=0;HaplotypeScore=91.3619;InbreedingCoeff=0.5071;MQ=60.60;MQ0=32;MQRankSum=-4.151;QD=4.99;ReadPosRankSum=-1.432;VQSLOD=1.4615;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,14:21:12.04:395,12,0	1/1:5,0:4:3:26,3,0	0/0:29,0:13:15.02:0,15,208	0/1:62,0:27:5.03:5,0,138	./.	0/0:7,0:7:15.05:0,15,285	0/0:23,0:21:33.09:0,33,555	0/0:23,0:20:12.04:0,12,220	0/0:15,0:13:21.04:0,21,322	0/0:17,0:14:20.39:0,20,241	0/0:3,0:2:6.01:0,6,89	0/0:14,0:11:12.04:0,12,223	0/0:10,0:10:15.05:0,15,287	0/0:12,0:10:6.02:0,6,116	0/0:11,0:10:12.03:0,12,192	0/0:9,0:9:12.51:0,13,241	0/0:14,0:13:23.89:0,24,334	1/1:8,1:9:15.05:261,15,0	0/0:13,0:11:8.99:0,9,103	0/0:8,0:6:6.01:0,6,89	0/0:32,0:31:34.20:0,34,576	0/0:9,0:9:9.03:0,9,179	0/0:13,0:13:15.05:0,15,277	0/0:23,0:22:45.14:0,45,831	0/0:15,0:15:16.78:0,17,297	0/1:13,0:12:19.86:20,0,291	0/0:9,0:9:14.95:0,15,213	0/0:7,0:6:6.02:0,6,126
chr10	69929088	.	G	GGA	596.15	PASS	AB=0.905;AC=22;AF=0.423;AN=52;BaseQRankSum=1.074;DP=489;FS=0.000;HRun=0;HaplotypeScore=74.8146;InbreedingCoeff=-0.0705;MQ=51.39;MQ0=14;MQRankSum=-0.085;QD=1.87;ReadPosRankSum=-1.124;VQSLOD=1.0022;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:28:0.89:2,1,0	./.	0/0:27,0:9:0:0,0,0	./.	0/0:15,0:16:0:0,0,0	0/0:13,0:14:5.76:0,6,38	0/1:15,0:14:35.48:35,0,55	0/1:21,0:19:0:0,0,0	0/1:13,7:20:64.09:74,0,64	0/0:15,0:15:2.80:0,3,13	0/0:8,0:10:8.85:0,9,79	0/1:19,0:18:1.06:1,0,153	0/0:12,0:14:14.84:0,15,136	0/0:7,0:7:6.02:0,6,65	0/0:15,0:16:20.87:0,21,200	0/1:10,6:16:23.38:80,0,23	0/1:11,0:10:35.40:35,0,41	0/0:8,0:11:5.64:0,6,27	1/1:19,0:18:7.62:72,8,0	1/1:8,0:7:3:25,3,0	0/1:29,0:27:19.36:100,0,19	0/1:12,0:12:5.53:6,0,75	0/1:12,6:18:17.31:17,0,56	0/1:15,18:34:16.24:165,0,16	0/1:25,0:24:11.99:12,0,19	0/1:21,0:20:23.68:26,0,24	1/1:8,0:16:6.01:65,6,0	1/1:6,0:5:2.97:20,3,0
chr10	69930651	.	TGG	T	4560.39	PASS	AB=0.667;AC=15;AF=0.268;AN=56;BaseQRankSum=-1.283;DP=612;FS=7.213;HRun=10;HaplotypeScore=90.6476;InbreedingCoeff=0.8871;MQ=79.34;MQ0=1;MQRankSum=-1.222;QD=21.92;ReadPosRankSum=1.000;VQSLOD=4.0590;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,30:34:71.98:860,72,0	0/0:2,0:9:17.47:0,17,60	0/0:20,0:20:35.23:0,35,367	0/0:19,0:18:26.51:0,27,310	1/1:5,18:22:57.08:619,57,0	0/0:17,0:18:41.63:0,42,626	0/0:26,0:26:63.20:0,63,975	1/1:8,28:37:81.14:880,81,0	0/0:20,0:20:51.15:0,51,758	0/0:13,0:13:27.09:0,27,429	0/0:9,0:13:26.56:0,27,347	0/0:18,0:18:42.13:0,42,638	0/0:16,0:17:41.59:0,42,553	0/0:19,0:19:48.14:0,48,714	0/0:28,0:30:71.69:0,72,1032	0/0:28,0:28:68.70:0,69,1009	1/1:2,23:25:60.16:668,60,0	1/1:0,18:18:48.13:535,48,0	0/0:3,0:18:44.79:0,45,155	0/0:5,0:29:63.62:0,64,228	0/0:7,1:27:21.60:0,22,145	0/0:18,0:18:35.68:0,36,488	1/1:8,12:21:35.82:378,36,0	1/1:2,22:24:54.14:602,54,0	0/0:27,0:27:45.14:0,45,692	0/1:13,1:26:18.32:18,0,98	0/0:6,0:29:65.40:0,65,256	0/0:2,0:4:4.99:0,5,17
chr10	69930660	.	GGT	G	1183.54	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=10.070;DP=583;FS=5.564;HRun=0;HaplotypeScore=97.7797;InbreedingCoeff=0.5527;MQ=75.52;MQ0=1;MQRankSum=-0.337;QD=6.36;ReadPosRankSum=4.741;VQSLOD=2.6150;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:40:99:276,0,117	0/0:10,0:10:29.43:0,29,205	0/0:12,0:12:30.41:0,30,395	0/0:20,0:19:33.07:0,33,395	1/1:22,1:23:28.50:242,29,0	0/0:20,0:20:56.46:0,56,817	0/0:27,0:27:78.61:0,79,1257	0/1:35,0:35:99:115,0,109	0/0:18,0:18:51.17:0,51,894	0/0:11,0:11:30.10:0,30,486	0/0:13,0:13:29.22:0,29,407	0/0:18,0:18:54.13:0,54,851	0/0:16,0:16:48.01:0,48,713	0/0:18,0:18:51.11:0,51,788	0/0:27,0:27:80.92:0,81,1176	0/0:25,0:25:72.14:0,72,1203	1/1:25,1:26:14.12:239,14,0	0/1:20,0:20:1.22:132,0,1	0/0:21,0:21:59.32:0,59,340	0/0:28,0:28:76.79:0,77,433	0/0:28,0:27:62.69:0,63,430	0/0:16,0:16:16.82:0,17,579	1/1:14,3:17:8.66:160,9,0	0/1:25,0:25:8.88:176,0,9	0/0:18,0:18:54.14:0,54,831	0/0:20,1:21:23.82:0,24,293	0/0:28,0:28:69.12:0,69,402	0/0:2,0:2:5.81:0,6,33
chr10	69930795	.	A	ACAAG	9934.38	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-13.313;DP=704;FS=5.935;HRun=0;HaplotypeScore=109.0385;InbreedingCoeff=0.9897;MQ=64.18;MQ0=2;MQRankSum=-1.662;QD=42.09;ReadPosRankSum=2.011;VQSLOD=4.9841;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,102,1544	0/0:2,0:11:14.91:0,15,140	0/0:47,0:38:39.03:0,39,486	0/0:33,0:21:11.39:0,11,214	0/0:23,0:23:57.11:0,57,761	0/0:21,0:21:30.09:0,30,458	0/0:16,0:16:27.09:0,27,433	0/0:13,0:29:18.11:0,18,142	0/0:17,0:17:27.04:0,27,364	0/0:24,0:24:39.13:0,39,610	0/0:22,0:22:39.09:0,39,571	0/0:16,0:16:24.08:0,24,388	0/0:19,0:19:48.14:0,48,726	0/0:27,0:27:54.16:0,54,822	0/0:29,0:29:57.15:0,57,844	0/0:28,0:28:72.16:0,72,1002	1/1:8,15:23:42.14:943,42,0	0/0:15,0:15:30.07:0,30,441	1/1:7,10:18:36.07:723,36,0	1/1:4,15:20:42.14:928,42,0	1/1:21,25:47:54.19:1285,54,0	0/0:24,0:24:51.16:0,51,801	1/1:7,15:22:39.13:942,39,0	1/1:5,31:37:66.23:1593,66,0	0/0:18,0:18:42.13:0,42,637	1/1:7,21:28:63.22:1493,63,0	1/1:8,19:29:54.19:1302,54,0	1/1:0,10:11:30.10:725,30,0
chr10	69930904	.	A	ATGAGCATG	3867.08	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.360;DP=474;FS=26.677;HRun=0;HaplotypeScore=135.6724;InbreedingCoeff=0.9696;MQ=75.91;MQ0=8;MQRankSum=-8.944;QD=82.28;ReadPosRankSum=-1.069;VQSLOD=1.4906;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:39.08:0,39,968	1/1:5,0:5:9.03:395,9,0	0/0:34,0:17:39.07:0,39,908	0/0:30,0:20:42.14:0,42,1190	0/0:12,0:12:30.09:0,30,765	0/0:24,0:24:63.17:0,63,1726	0/0:18,0:18:51.13:0,51,1347	1/1:18,0:18:54.18:2082,54,0	0/0:21,0:21:63.20:0,63,1676	0/0:19,0:19:57.20:0,57,1588	0/0:12,0:12:33.11:0,33,909	0/0:19,0:19:54.19:0,54,1438	0/0:11,0:11:30.10:0,30,861	0/0:13,0:13:39.13:0,39,1102	0/0:20,0:19:51.18:0,51,1480	0/0:14,0:14:42.14:0,42,1218	1/1:4,3:7:18.03:565,18,0	0/0:14,0:14:36.12:0,36,983	0/0:13,0:13:39.13:0,39,1142	0/0:15,0:15:39.60:0,40,981	0/0:33,0:33:48.16:0,48,1330	0/0:12,0:12:27.09:0,27,790	1/1:5,3:8:12.51:381,13,0	1/1:6,3:9:12.04:443,12,0	0/0:18,0:18:51.18:0,51,1450	0/0:21,0:21:60.20:0,60,1680	0/0:16,0:16:39.13:0,39,1087	0/0:10,0:10:30.10:0,30,871
chr10	69930907	.	C	CACAAATCAGTCAA	2697.63	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=8.672;DP=495;FS=18.259;HRun=0;HaplotypeScore=190.9236;InbreedingCoeff=0.8484;MQ=66.20;MQ0=9;MQRankSum=-8.618;QD=47.33;ReadPosRankSum=-3.521;VQSLOD=1.6629;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:33.11:0,33,1257	1/1:9,0:8:15.01:617,15,0	0/0:28,0:11:30.10:0,30,1156	0/0:26,0:16:43.03:0,43,1544	0/0:12,0:12:30.03:0,30,969	0/0:26,0:26:59.47:0,59,2284	0/0:16,0:16:45.15:0,45,1832	0/1:18,0:16:33.62:600,0,34	0/0:23,0:23:54.17:0,54,2134	0/0:18,0:18:51.18:0,51,2045	0/0:11,0:11:33.11:0,33,1231	0/0:18,0:18:48.14:0,48,1729	0/0:12,0:12:33.07:0,33,1167	0/0:15,0:15:42.13:0,42,1600	0/0:22,0:22:51.18:0,51,2004	0/0:18,0:18:45.13:0,45,1553	1/1:3,3:6:15.05:807,15,0	0/0:17,0:17:41.53:0,42,1223	0/0:13,0:13:39.13:0,39,1551	0/0:17,0:17:36.06:0,36,1100	0/0:32,0:32:42.14:0,42,1685	0/0:16,0:16:33.08:0,33,1104	1/1:12,3:15:21.07:428,21,0	1/1:6,3:9:12.04:405,12,0	0/0:21,0:21:51.18:0,51,2021	0/0:21,0:21:57.20:0,57,2326	0/0:17,0:17:42.56:0,43,1472	0/0:11,0:11:33.01:0,33,1236
chr10	69930926	.	T	TCA	2104.77	PASS	AB=0.891;AC=18;AF=0.321;AN=56;BaseQRankSum=1.469;DP=519;FS=20.178;HRun=0;HaplotypeScore=95.3428;InbreedingCoeff=0.4762;MQ=53.32;MQ0=14;MQRankSum=-1.112;QD=8.81;ReadPosRankSum=-0.101;VQSLOD=1.7730;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:10,27:34:52.01:126,0,52	0/0:13,0:11:8.64:0,9,47	0/0:20,0:4:3:0,3,27	0/1:14,0:7:15.86:16,0,29	0/1:15,0:15:13.76:246,0,14	0/0:23,0:23:34.09:0,34,348	0/0:18,0:16:21.04:0,21,237	0/0:19,0:18:0.46:0,0,2	0/0:24,0:24:53.80:0,54,506	0/0:22,0:22:34.01:0,34,522	0/0:9,0:8:14.92:0,15,150	0/0:19,0:19:32.33:0,32,293	0/0:15,0:15:29.95:0,30,299	0/0:20,0:19:48.90:0,49,489	0/0:21,0:20:17.05:0,17,375	0/0:18,0:18:26.46:0,26,294	0/1:7,0:7:0:0,0,0	1/1:21,3:23:56.10:557,56,0	1/1:15,0:15:31.87:308,32,0	0/1:18,1:19:2.55:137,0,3	1/1:9,26:36:6.02:100,6,0	0/0:16,0:16:26.96:0,27,234	0/1:14,0:17:0:0,0,0	0/1:10,0:10:6.89:8,0,7	0/0:23,0:23:46.65:0,47,409	0/1:7,14:21:2.15:324,0,2	1/1:15,0:13:30.87:319,31,0	1/1:7,1:8:14.85:137,15,0
chr10	69930938	.	G	GCA	814.04	PASS	AB=0.906;AC=20;AF=0.417;AN=48;BaseQRankSum=3.026;DP=472;FS=23.748;HRun=0;HaplotypeScore=85.4250;InbreedingCoeff=0.3894;MQ=53.11;MQ0=18;MQRankSum=0.089;QD=3.35;ReadPosRankSum=2.063;VQSLOD=0.5594;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:33:12.41:99,12,0	0/0:14,0:12:9.07:0,9,47	./.	./.	1/1:10,10:20:6.02:89,6,0	0/0:19,2:21:5.27:0,5,52	0/1:12,0:16:34.81:35,0,56	1/1:9,0:9:0.47:1,0,0	0/0:21,0:20:27.07:0,27,294	0/0:22,0:22:14.48:0,14,127	0/0:7,0:9:3.01:0,3,33	0/0:13,0:13:24.05:0,24,253	0/0:14,0:15:29.74:0,30,285	0/1:19,0:18:15.17:15,0,209	0/0:22,0:21:20.39:0,20,201	0/0:17,0:17:26.58:0,27,246	./.	1/1:23,2:24:26.03:279,26,0	0/1:16,0:15:36.62:40,0,37	0/1:12,6:19:36.08:36,0,39	1/1:30,1:30:3.93:29,4,0	0/0:16,0:16:18.34:0,18,169	./.	0/1:6,0:6:0:0,0,0	0/0:20,0:21:23.73:0,24,223	1/1:18,1:17:5.96:175,6,0	0/1:11,8:16:2.83:122,0,3	1/1:4,1:5:5.05:51,5,0
chr10	69930985	.	TAA	T	184.63	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.484;DP=529;FS=0.000;HRun=3;HaplotypeScore=90.8741;InbreedingCoeff=0.9642;MQ=73.98;MQ0=11;MQRankSum=-0.876;QD=26.38;ReadPosRankSum=2.641;VQSLOD=2.3693;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:47.95:0,48,771	1/1:0,7:6:18.06:275,18,0	0/0:35,0:23:69.11:0,69,1165	0/0:29,0:21:63.13:0,63,1025	0/0:23,0:23:63.09:0,63,1102	0/0:20,0:20:56.80:0,57,1020	0/0:19,0:18:39.06:0,39,610	0/0:18,0:18:51.11:0,51,890	0/0:23,0:23:66.20:0,66,1149	0/0:20,0:20:57.19:0,57,1067	0/0:9,0:9:24:0,24,387	0/0:15,0:15:45.15:0,45,869	0/0:15,0:15:45.15:0,45,830	0/0:22,0:22:63.16:0,63,1135	0/0:17,0:17:48.15:0,48,865	0/0:21,0:21:63.20:0,63,1176	0/0:17,0:17:50.93:0,51,848	0/0:24,0:23:69.20:0,69,1284	0/0:20,0:20:59.99:0,60,1026	0/0:18,0:18:48.12:0,48,858	0/0:19,0:19:24.08:0,24,463	0/0:18,0:18:51.16:0,51,953	0/0:15,0:15:44.89:0,45,610	0/0:14,0:13:17.76:0,18,194	0/0:24,0:24:62.95:0,63,1164	0/0:16,0:16:45.15:0,45,839	0/0:21,0:21:48.14:0,48,884	0/0:5,0:5:15.05:0,15,278
chr10	69931572	.	CTT	C	1511.65	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.929;DP=555;FS=1.057;HRun=12;HaplotypeScore=78.4626;InbreedingCoeff=0.8466;MQ=74.06;MQ0=1;MQRankSum=-0.865;QD=18.90;ReadPosRankSum=3.794;VQSLOD=3.0589;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:20:36.45:0,36,192	0/0:2,0:5:7.49:0,7,26	0/0:26,0:25:37.77:0,38,427	0/0:16,0:13:25.07:0,25,248	0/0:3,0:16:37.43:0,37,185	0/0:15,0:15:39.06:0,39,499	0/0:21,0:21:60.18:0,60,859	1/1:9,14:24:6.74:291,7,0	0/0:18,1:21:23.12:0,23,602	0/0:22,0:22:54.12:0,54,669	0/0:18,0:18:51.08:0,51,614	0/0:16,0:16:45.12:0,45,616	0/0:25,0:26:59.62:0,60,777	0/0:14,1:15:2.58:0,3,382	0/0:22,0:23:60.18:0,60,840	0/0:28,0:28:75.21:0,75,1043	1/1:0,19:19:48.11:488,48,0	0/0:4,1:14:0.95:0,1,138	0/0:16,0:21:50.70:0,51,589	0/0:20,0:20:45.08:0,45,557	0/0:14,0:16:36.08:0,36,462	0/0:17,0:17:48.01:0,48,561	1/1:0,15:15:33.07:336,33,0	1/1:2,20:22:54.11:550,54,0	0/0:17,0:20:48.11:0,48,596	0/0:17,0:18:51.11:0,51,637	0/0:31,0:31:84.19:0,84,1134	0/0:21,0:23:66.08:0,66,805
chr10	69932957	.	AGATG	A	2743.89	PASS	AB=0.963;AC=17;AF=0.315;AN=54;BaseQRankSum=0.797;DP=717;FS=0.000;HRun=0;HaplotypeScore=128.3599;InbreedingCoeff=0.8345;MQ=73.72;MQ0=9;MQRankSum=0.656;QD=13.07;ReadPosRankSum=1.668;VQSLOD=3.2754;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:46:25.29:0,25,366	0/0:8,0:12:5.98:0,6,72	1/1:32,0:26:0.47:1,0,0	./.	0/0:14,0:17:9.13:0,9,157	0/0:18,0:18:27.07:0,27,587	0/0:24,0:36:27.08:0,27,456	0/0:39,0:38:24.08:0,24,460	1/1:9,13:23:33.11:494,33,0	1/1:12,3:14:9.01:116,9,0	1/1:7,9:16:24.08:373,24,0	0/0:22,0:22:39.13:0,39,917	1/1:11,16:26:30.10:466,30,0	0/0:29,0:29:60.18:0,60,1272	1/1:9,14:23:36.12:558,36,0	1/1:8,15:22:42.14:652,42,0	0/0:29,0:29:55.40:0,55,1196	0/0:11,0:19:12.04:0,12,221	0/0:18,0:18:21.07:0,21,410	0/0:17,0:25:27.09:0,27,481	0/0:33,0:52:39.12:0,39,653	0/1:25,1:26:13.49:13,0,673	0/0:10,0:18:17.09:0,17,267	0/0:22,0:35:30.10:0,30,524	1/1:14,10:25:18.05:261,18,0	0/0:11,0:25:57.18:0,57,960	0/0:11,0:23:32.14:0,32,528	0/0:1,0:8:12.04:0,12,209
chr10	69934125	.	AAC	A	575.51	PASS	AB=0.927;AC=9;AF=0.167;AN=54;BaseQRankSum=5.865;DP=591;FS=4.229;HRun=0;HaplotypeScore=84.7142;InbreedingCoeff=0.3009;MQ=58.62;MQ0=4;MQRankSum=0.936;QD=4.20;ReadPosRankSum=1.718;VQSLOD=2.2855;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:47.93:0,48,718	1/1:2,8:10:24.07:283,24,0	0/0:32,0:16:27.07:0,27,387	0/0:29,0:22:27.38:0,27,350	0/0:34,0:35:81.25:0,81,1212	0/1:27,2:29:7.47:7,0,809	0/1:9,2:11:52.62:53,0,167	0/0:23,0:36:62.95:0,63,639	0/0:17,0:17:39.13:0,39,615	0/1:26,2:28:1.46:1,0,907	0/0:19,0:19:45.15:0,45,706	0/0:17,1:18:12.82:0,13,642	0/0:18,1:19:9.81:0,10,605	0/0:23,2:25:21.85:0,22,805	0/0:21,1:22:18.84:0,19,768	0/1:18,0:18:33.20:33,0,437	0/0:31,1:32:24.86:0,25,853	1/1:5,11:18:13.73:323,14,0	0/0:17,0:17:32.76:0,33,259	0/0:20,0:22:6:0,6,52	./.	0/0:21,1:22:18.81:0,19,722	0/0:19,3:22:3.80:0,4,528	0/1:21,2:23:15.25:15,0,690	0/0:8,0:8:18.06:0,18,282	0/0:19,0:18:35.67:0,36,291	0/0:19,0:20:14.86:0,15,105	0/0:3,0:3:5.92:0,6,39
chr10	69934366	.	T	TGA	308.78	PASS	AB=0.545;AC=9;AF=0.180;AN=50;BaseQRankSum=-0.589;DP=382;FS=3.917;HRun=0;HaplotypeScore=64.1193;InbreedingCoeff=0.6037;MQ=66.32;MQ0=35;MQRankSum=2.267;QD=17.15;ReadPosRankSum=-2.309;VQSLOD=2.4470;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:42.13:0,42,502	0/0:10,0:10:26.66:0,27,328	0/0:45,0:14:8.91:0,9,328	0/0:33,0:12:10.07:0,10,235	0/0:18,0:16:39.11:0,39,509	0/0:19,0:19:45.08:0,45,644	0/0:20,0:19:39.09:0,39,537	0/0:4,0:2:3.01:0,3,43	0/0:13,0:12:27.03:0,27,360	0/0:25,0:24:54.11:0,54,764	0/0:15,0:15:34.56:0,35,407	0/0:14,0:14:35.90:0,36,447	0/0:9,0:8:17.69:0,18,168	0/0:17,0:17:30.93:0,31,455	0/0:14,0:13:23.97:0,24,314	0/0:12,0:12:29.75:0,30,377	0/0:7,0:2:0:0,0,0	0/0:11,0:8:15.04:0,15,178	./.	1/1:1,0:1:3.01:46,3,0	1/1:5,0:4:5.18:48,5,0	0/0:19,0:18:44.77:0,45,576	1/1:3,0:3:6.01:97,6,0	1/1:3,0:2:2.69:45,3,0	0/0:30,0:30:73.87:0,74,1027	0/1:1,5:6:30.90:201,0,31	./.	./.
chr10	69934511	.	G	GGT	2577.13	PASS	AB=0.765;AC=21;AF=0.389;AN=54;BaseQRankSum=-3.716;DP=625;FS=7.420;HRun=0;HaplotypeScore=117.0377;InbreedingCoeff=0.1611;MQ=65.32;MQ0=10;MQRankSum=-1.970;QD=7.22;ReadPosRankSum=-2.351;VQSLOD=2.4698;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:2.99:24,3,0	./.	0/0:30,0:16:3.01:0,3,33	0/0:30,0:20:3.01:0,3,33	1/1:16,0:16:5.99:50,6,0	0/0:15,0:17:29.74:0,30,295	0/0:25,0:29:41.94:0,42,448	1/1:26,0:24:5.97:45,6,0	0/0:18,0:21:26.72:0,27,251	0/1:13,15:29:96.50:448,0,97	0/1:12,7:20:48.73:164,0,49	0/1:23,1:28:0.78:1,0,364	0/1:14,1:16:27.50:27,0,130	0/0:31,0:34:47.44:0,47,445	0/1:15,11:28:12.21:374,0,12	0/0:16,0:18:38.66:0,39,385	0/0:6,0:9:8.52:0,9,42	1/1:13,0:13:11.67:87,12,0	1/1:16,3:21:21.97:255,22,0	0/0:14,2:18:5.68:0,6,28	0/1:35,13:48:55.60:352,0,56	0/0:15,0:15:33.09:0,33,367	0/0:5,0:13:17.04:0,17,84	0/0:12,0:26:27.54:0,28,151	0/1:6,5:11:24.33:82,0,24	0/1:23,10:36:90.90:381,0,91	0/1:14,9:24:61.33:411,0,61	1/1:4,1:5:2.73:45,3,0
chr10	69934645	.	CTG	C	8528.02	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.708;DP=1025;FS=24.019;HRun=0;HaplotypeScore=164.9078;InbreedingCoeff=0.9913;MQ=61.22;MQ0=5;MQRankSum=-1.459;QD=31.35;ReadPosRankSum=1.893;VQSLOD=3.9539;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:64:99:0,163,2774	0/0:7,0:7:15.04:0,15,230	0/0:27,0:21:43.63:0,44,604	0/0:31,0:12:12.67:0,13,232	0/0:28,0:28:69.24:0,69,1187	0/0:20,0:20:54.18:0,54,935	0/0:41,0:41:96.33:0,96,1622	0/0:42,0:42:99:0,99,1626	0/0:41,0:41:99:0,114,1958	0/0:32,0:32:93.32:0,93,1599	0/0:25,0:25:60.21:0,60,1039	0/0:33,0:33:99:0,99,1714	0/0:42,0:42:99:0,111,1879	0/0:54,0:54:99:0,147,2501	0/0:43,0:43:99:0,117,2027	0/0:43,0:43:99:0,129,2230	0/0:31,0:31:78.26:0,78,1244	0/0:24,0:24:54.18:0,54,935	1/1:1,12:13:33.11:432,33,0	1/1:2,28:30:69.18:882,69,0	1/1:12,92:103:99:2977,226,0	0/0:30,0:30:75.25:0,75,1238	0/0:26,0:26:60.18:0,60,981	0/0:44,0:44:96.19:0,96,1603	0/0:25,0:25:69.23:0,69,1168	1/1:4,46:50:90.22:1622,90,0	1/1:0,43:43:99:1497,114,0	1/1:3,29:32:84.28:1118,84,0
chr10	69934656	.	AGT	A	3776.93	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.983;DP=1031;FS=6.816;HRun=0;HaplotypeScore=180.0317;InbreedingCoeff=0.9955;MQ=58.63;MQ0=4;MQRankSum=-0.935;QD=27.17;ReadPosRankSum=-1.605;VQSLOD=3.9626;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:65:99:0,166,2749	0/0:5,0:5:15.05:0,15,249	0/0:33,0:24:50.19:0,50,796	0/0:41,0:20:36.09:0,36,486	0/0:28,0:28:72.22:0,72,1168	0/0:21,0:21:54.18:0,54,903	0/0:38,1:39:58.54:0,59,1442	1/1:7,28:35:84.27:1069,84,0	0/0:39,0:39:99:0,102,1694	0/0:34,0:34:87.30:0,87,1452	0/0:19,0:19:48.16:0,48,783	0/0:36,0:36:90.27:0,90,1475	0/0:39,0:39:90.31:0,90,1503	0/0:56,0:56:99:0,163,2699	0/0:45,0:45:99:0,111,1828	0/0:42,0:42:99:0,105,1749	1/1:6,29:35:75.15:918,75,0	0/0:27,0:27:69.19:0,69,1102	0/0:15,0:15:42.11:0,42,656	0/0:29,0:29:60.20:0,60,943	0/0:102,0:101:99:0,219,3562	0/0:25,0:25:63.22:0,63,1053	1/1:4,23:27:63.07:747,63,0	1/1:9,33:42:84.22:1043,84,0	0/0:25,0:25:66.23:0,66,1104	0/0:53,0:53:99:0,129,2054	0/0:44,0:44:99:0,111,1643	0/0:29,0:29:81.28:0,81,1317
chr10	69934719	.	A	ATG	5584.67	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.669;DP=1034;FS=8.050;HRun=0;HaplotypeScore=164.2393;InbreedingCoeff=0.9993;MQ=60.12;MQ0=2;MQRankSum=-1.716;QD=34.05;ReadPosRankSum=-0.547;VQSLOD=6.1080;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:72,0:72:99:0,145,1911	0/0:14,0:14:33.10:0,33,424	0/0:46,0:40:79.83:0,80,913	0/0:44,0:33:67.65:0,68,825	0/0:20,0:20:42.12:0,42,525	0/0:26,0:26:54.18:0,54,695	0/0:40,0:40:99:0,99,1210	1/1:13,41:55:99:1930,120,0	0/0:44,0:44:99:0,114,1452	0/0:40,0:40:99:0,111,1416	0/0:18,0:18:51.12:0,51,633	0/0:39,0:38:99:0,99,1256	0/0:35,0:35:90.25:0,90,1116	0/0:50,0:50:99:0,129,1584	0/0:50,0:50:99:0,138,1746	0/0:37,0:37:99:0,99,1233	1/1:9,24:33:75.26:1254,75,0	0/0:30,0:30:72.19:0,72,908	0/0:17,0:17:45.14:0,45,579	0/0:27,0:27:69.20:0,69,860	0/0:89,0:88:99:0,205,2568	0/0:24,0:24:66.20:0,66,832	1/1:4,13:17:36.12:607,36,0	1/1:12,47:58:99:1794,108,0	0/0:23,0:24:66:0,66,791	0/0:35,0:35:93.23:0,93,1158	0/0:35,0:35:66.21:0,66,849	0/0:13,0:13:24.01:0,24,273
chr10	69934752	.	AGT	A	2991.90	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.245;DP=996;FS=6.171;HRun=0;HaplotypeScore=160.1705;InbreedingCoeff=0.9974;MQ=59.79;MQ0=3;MQRankSum=0.855;QD=25.57;ReadPosRankSum=4.008;VQSLOD=4.3565;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,53:64:99:1658,126,0	1/1:1,9:10:21.07:279,21,0	0/0:43,0:30:60.89:0,61,950	0/0:42,0:34:58.88:0,59,955	1/1:1,16:17:42.14:559,42,0	0/0:32,0:31:84.29:0,84,1453	0/0:36,0:36:99:0,102,1675	0/0:44,0:44:99:0,102,1559	0/0:49,0:49:99:0,138,2331	0/0:42,0:42:99:0,108,1871	0/0:18,0:18:33.11:0,33,559	0/0:41,0:41:98.98:0,99,1817	0/0:35,0:35:99:0,99,1637	0/0:40,0:40:99:0,114,1970	0/0:51,0:51:99:0,135,2306	0/0:48,0:48:99:0,129,2169	0/0:25,0:25:60.14:0,60,973	1/1:4,22:26:31.17:656,31,0	0/0:22,0:22:57.19:0,57,956	0/0:26,0:26:60.21:0,60,1039	0/0:93,0:93:99:0,235,3962	0/0:25,0:25:66.23:0,66,1139	0/0:20,0:20:30.09:0,30,488	0/0:56,0:55:99:0,121,1988	0/0:22,0:22:60.21:0,60,1035	0/0:34,0:34:93.32:0,93,1606	0/0:25,0:25:66.23:0,66,1142	0/0:8,0:8:21.04:0,21,318
chr10	69935026	.	AACACACACAC	A	1541.69	PASS	AB=0.782;AC=9;AF=0.167;AN=54;BaseQRankSum=7.495;DP=557;FS=37.486;HRun=0;HaplotypeScore=160.1712;InbreedingCoeff=0.2656;MQ=64.98;MQ0=12;MQRankSum=-7.228;QD=10.56;ReadPosRankSum=-2.151;VQSLOD=0.6936;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,10:35:20.82:569,21,0	1/1:6,0:9:6.02:140,6,0	0/0:27,0:18:6.02:0,6,112	./.	0/1:17,9:27:24.20:338,0,24	0/0:16,0:17:24.08:0,24,1053	0/0:20,0:19:26.71:0,27,1169	0/0:22,0:22:3.01:0,3,99	0/0:18,0:21:39.13:0,39,1639	0/0:16,0:16:34:0,34,1167	0/0:21,0:21:27.09:0,27,1170	0/0:20,0:21:45.15:0,45,1921	0/0:11,0:13:30.10:0,30,1111	0/0:7,0:7:12.04:0,12,513	0/0:21,0:24:36.10:0,36,1294	0/0:27,0:29:57.20:0,57,2470	0/1:13,1:17:27.89:110,0,28	0/1:10,5:16:99:320,0,137	0/0:13,0:13:10.28:0,10,394	0/0:22,0:22:29.03:0,29,1245	0/0:32,0:31:60.15:0,60,2608	0/0:14,0:14:12.04:0,12,564	0/1:13,0:17:44.53:45,0,55	0/1:20,1:22:7.94:164,0,8	0/0:21,0:24:39.13:0,39,1044	0/0:22,0:23:48.15:0,48,1643	0/0:16,0:16:36.12:0,36,1520	0/0:8,0:8:13.29:0,13,536
chr10	69935982	.	ATCTCTCTCTCTCTC	A	1672.36	PASS	AB=0.800;AC=9;AF=0.167;AN=54;BaseQRankSum=5.903;DP=537;FS=16.727;HRun=0;HaplotypeScore=188.1221;InbreedingCoeff=0.6821;MQ=67.02;MQ0=19;MQRankSum=-4.009;QD=17.42;ReadPosRankSum=1.576;VQSLOD=0.9927;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:30:21.03:0,21,316	0/0:6,0:6:3.01:0,3,89	0/0:37,0:11:0:0,0,0	0/0:49,0:19:4.37:0,4,87	0/0:12,0:16:9.37:0,9,572	0/0:31,0:32:51.17:0,51,2647	0/0:8,0:8:9.03:0,9,549	0/0:24,0:24:7.64:0,8,133	0/0:11,0:14:30.10:0,30,1585	0/0:10,0:15:27.09:0,27,1087	0/0:15,0:16:18.06:0,18,796	0/0:11,0:11:9.03:0,9,596	0/0:12,0:12:21.07:0,21,1128	0/0:13,0:13:12.51:0,13,575	0/0:18,0:22:27.09:0,27,1243	0/0:19,0:21:30.10:0,30,1151	0/0:11,0:16:33.11:0,33,1310	0/0:16,0:18:16.61:0,17,394	./.	1/1:12,8:22:15.05:517,15,0	1/1:14,1:16:9.03:213,9,0	0/0:21,0:21:30.10:0,30,1543	0/0:20,0:20:27.08:0,27,1031	0/0:11,0:12:15.05:0,15,657	0/0:14,0:14:18.05:0,18,562	1/1:12,6:18:15.04:289,15,0	1/1:17,5:23:14.75:498,15,0	0/1:12,4:15:32.78:308,0,33
chr10	69936768	.	CG	C	8105.73	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.004;DP=710;FS=2.050;HRun=4;HaplotypeScore=71.3280;InbreedingCoeff=0.9999;MQ=88.86;MQ0=0;MQRankSum=-2.043;QD=31.79;ReadPosRankSum=1.100;VQSLOD=5.4030;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1663	0/0:10,0:10:30.10:0,30,419	0/0:26,0:26:66.19:0,66,902	0/0:29,0:29:78.21:0,78,1042	0/0:33,0:33:84.27:0,84,1159	0/0:23,0:23:69.23:0,69,965	0/0:20,0:20:57.18:0,57,781	1/1:1,30:31:78.18:897,78,0	0/0:22,0:22:66.22:0,66,923	0/0:34,0:34:99:0,102,1401	0/0:22,0:22:60.20:0,60,835	0/0:17,0:17:51.15:0,51,680	0/0:36,0:36:99:0,105,1412	0/0:24,0:24:66.22:0,66,924	0/0:27,0:27:81.24:0,81,1098	0/0:28,0:27:81.24:0,81,1085	1/1:0,29:29:84.26:1007,84,0	0/0:12,0:12:36.12:0,36,504	1/1:0,15:15:45.14:540,45,0	1/1:2,27:29:78.24:935,78,0	1/1:1,27:28:75.23:899,75,0	0/0:30,0:30:87.29:0,87,1216	1/1:0,22:22:63.19:755,63,0	1/1:0,25:25:66.20:792,66,0	0/0:21,0:21:60.20:0,60,839	1/1:6,28:34:48.31:988,48,0	1/1:1,29:30:72.22:864,72,0	1/1:1,11:12:36.11:428,36,0
chr10	69937440	.	GA	G	2947.60	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.372;DP=712;FS=13.071;HRun=7;HaplotypeScore=66.5422;InbreedingCoeff=0.9973;MQ=76.26;MQ0=0;MQRankSum=-1.147;QD=24.36;ReadPosRankSum=-2.676;VQSLOD=1.9463;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1282	0/0:18,0:18:45.13:0,45,553	0/0:18,0:18:42.09:0,42,490	0/0:9,0:9:21.07:0,21,263	0/0:34,0:34:90.28:0,90,1121	0/0:16,0:16:48.10:0,48,573	0/0:9,0:9:27.03:0,27,307	1/1:1,38:39:99:1149,114,0	0/0:24,0:24:63.20:0,63,792	0/0:32,0:32:90.29:0,90,1131	0/0:24,0:24:69.22:0,69,868	0/0:24,0:24:66.21:0,66,830	0/0:22,0:22:63.19:0,63,780	0/0:30,0:30:87.28:0,87,1093	0/0:27,0:27:75.24:0,75,943	0/0:21,0:21:54.17:0,54,679	1/1:1,26:27:69.16:704,69,0	0/0:13,0:13:30.08:0,30,363	0/0:31,0:31:93.30:0,93,1163	0/0:42,1:43:89.77:0,90,1441	0/0:26,0:26:78.25:0,78,981	0/0:30,0:30:87.26:0,87,1080	1/1:2,27:29:66.15:673,66,0	1/1:1,25:26:57.13:582,57,0	0/0:43,0:43:99:0,120,1509	0/0:27,0:27:75.23:0,75,933	0/0:28,0:28:81.25:0,81,1002	0/0:7,0:7:21.07:0,21,264
chr10	69942073	.	AG	A	6250.15	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.469;DP=861;FS=3.722;HRun=1;HaplotypeScore=80.8117;InbreedingCoeff=0.9996;MQ=82.23;MQ0=0;MQRankSum=-7.323;QD=38.34;ReadPosRankSum=0.615;VQSLOD=5.3803;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,175,2679	0/0:16,0:16:48.14:0,48,741	0/0:33,0:33:99:0,99,1472	0/0:20,0:20:24.98:0,25,745	0/0:32,0:32:93.29:0,93,1428	0/0:24,0:24:72.25:0,72,1150	0/0:27,0:27:81.25:0,81,1266	0/0:41,0:41:99:0,120,1852	0/0:37,0:37:99:0,111,1750	0/0:42,0:42:99:0,126,1968	0/0:18,0:18:51.17:0,51,815	0/0:37,0:37:99:0,111,1740	0/0:32,0:32:96.31:0,96,1507	0/0:31,0:31:93.30:0,93,1462	0/0:48,0:48:99:0,144,2277	0/0:40,0:40:99:0,120,1869	0/0:30,0:30:84.24:0,84,1286	0/0:24,0:24:69.24:0,69,1102	1/1:0,26:26:78.18:1032,78,0	1/1:0,24:24:66.22:923,66,0	1/1:2,43:45:99:1784,129,0	0/0:30,0:30:90.29:0,90,1413	0/0:19,0:19:57.19:0,57,907	0/0:37,0:37:99:0,111,1746	0/0:22,0:22:63.20:0,63,985	1/1:1,37:38:66.37:1468,66,0	1/1:0,18:18:45.14:629,45,0	1/1:0,12:12:30.10:415,30,0
chr10	69942374	.	C	CTCAT	9876.16	PASS	AB=0.625;AC=17;AF=0.304;AN=56;BaseQRankSum=-14.890;DP=827;FS=0.354;HRun=0;HaplotypeScore=128.3032;InbreedingCoeff=0.8765;MQ=61.60;MQ0=4;MQRankSum=2.036;QD=38.28;ReadPosRankSum=1.955;VQSLOD=5.2401;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,108,1696	0/0:2,0:11:20.73:0,21,195	0/0:20,0:14:3.01:0,3,48	0/0:21,0:18:8.62:0,9,106	0/0:25,0:25:48.16:0,48,765	0/0:23,0:24:51.17:0,51,794	0/0:35,0:36:60.18:0,60,913	0/0:31,0:31:45.14:0,45,693	0/0:39,0:39:84.29:0,84,1335	0/0:35,0:35:68.49:0,68,1055	0/0:19,0:19:42.14:0,42,671	0/0:39,0:40:90.30:0,90,1397	0/0:37,0:37:75.25:0,75,1177	0/0:34,0:34:78.26:0,78,1217	0/0:39,0:39:96.31:0,96,1507	0/0:34,0:34:69.24:0,69,1097	0/1:10,14:25:65.70:545,0,66	0/0:18,0:18:36.09:0,36,527	1/1:14,9:23:31.35:709,31,0	1/1:8,16:24:48.12:1046,48,0	1/1:15,26:41:63.22:1511,63,0	0/0:29,0:29:54.17:0,54,840	1/1:7,17:25:46.40:1080,46,0	1/1:15,32:46:39.40:1963,39,0	0/0:30,0:30:69.21:0,69,1056	1/1:10,24:32:24.34:1604,24,0	1/1:14,15:30:42.14:989,42,0	1/1:3,6:9:18.06:431,18,0
chr10	69943283	.	T	TAAATGTCTTCCGTGTGAGTA	3425.97	PASS	AB=0.912;AC=33;AF=0.750;AN=44;BaseQRankSum=-4.555;DP=70;FS=1.381;HRun=0;HaplotypeScore=107.2306;InbreedingCoeff=-0.0807;MQ=103.41;MQ0=0;MQRankSum=1.904;QD=55.26;ReadPosRankSum=-3.819;VQSLOD=2.2801;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:1:3.01:60,3,0	0/0:1,0:1:0:0,0,0	0/1:3,1:7:16.75:1253,0,17	0/1:2,0:3:7.71:422,0,8	./.	0/1:3,0:3:4.59:96,0,5	./.	1/1:2,0:2:6.02:96,6,0	0/1:3,0:3:5.81:132,0,6	1/1:4,0:4:4.59:113,5,0	1/1:5,0:5:13.35:133,13,0	0/1:3,0:3:2.77:129,0,3	1/1:2,0:2:5.74:36,6,0	0/0:5,0:5:5.35:0,5,26	1/1:4,0:4:5.88:111,6,0	0/1:5,0:5:1.80:117,0,2	./.	1/1:1,0:1:2.99:24,3,0	./.	1/1:2,0:2:6.01:78,6,0	1/1:1,0:1:3.01:40,3,0	1/1:2,0:2:5.05:92,5,0	1/1:3,0:3:5.56:141,6,0	./.	0/1:5,0:5:10.36:163,0,10	1/1:3,0:3:6.01:88,6,0	1/1:3,0:3:6.02:102,6,0	./.
chr10	69943360	.	A	ATTAC	4934.31	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-0.413;DP=559;FS=0.938;HRun=0;HaplotypeScore=172.1383;InbreedingCoeff=0.9033;MQ=68.06;MQ0=0;MQRankSum=-4.946;QD=60.92;ReadPosRankSum=-3.596;VQSLOD=5.2267;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:66.23:0,66,1248	0/0:8,0:8:18.06:0,18,341	0/0:16,0:14:48.11:0,48,746	0/0:14,0:12:23.34:0,23,477	0/0:24,0:24:62.34:0,62,1107	0/0:25,0:25:52.66:0,53,975	0/0:13,0:13:24.15:0,24,577	1/1:9,17:28:64.48:1670,64,0	0/0:18,0:18:35.72:0,36,799	0/0:22,0:22:62.70:0,63,1131	0/0:28,0:28:72.13:0,72,1223	0/0:28,0:28:64.49:0,64,1350	0/0:21,0:21:54.08:0,54,946	0/0:23,0:23:57.16:0,57,992	0/0:26,0:26:62.10:0,62,1300	0/0:24,0:24:69:0,69,1089	1/1:3,4:7:21.07:515,21,0	0/0:7,0:7:21.06:0,21,341	0/0:25,0:25:47.40:0,47,1211	0/0:29,0:29:71.30:0,71,1363	0/0:1,0:1:3.01:0,3,57	0/0:18,0:18:54.14:0,54,971	1/1:5,26:34:77.18:2189,77,0	1/1:4,6:11:24.97:561,25,0	0/0:22,0:22:60.10:0,60,984	0/0:26,0:26:75.26:0,75,1419	0/0:30,0:30:84.29:0,84,1549	0/0:3,0:3:3.01:0,3,57
chr10	69943397	.	G	GT	675.54	PASS	AB=0.949;AC=7;AF=0.125;AN=56;BaseQRankSum=10.957;DP=671;FS=9.528;HRun=4;HaplotypeScore=127.6153;InbreedingCoeff=0.0923;MQ=55.87;MQ0=6;MQRankSum=-7.116;QD=5.16;ReadPosRankSum=2.005;VQSLOD=-0.2156;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:27:30.27:0,30,781	0/0:10,0:10:30.09:0,30,354	0/0:39,0:20:48.08:0,48,529	0/0:28,0:23:44.72:0,45,625	0/0:35,0:35:99:0,99,1175	0/0:24,0:24:69.21:0,69,822	0/0:14,0:14:33.08:0,33,379	0/0:31,0:30:84.73:0,85,1006	0/0:23,0:23:63.14:0,63,738	0/0:25,0:25:72.22:0,72,861	0/0:29,0:29:87.26:0,87,1032	0/0:30,0:30:84.25:0,84,998	0/0:25,0:25:63.19:0,63,755	0/0:20,0:20:57.17:0,57,680	0/0:27,0:27:75.23:0,75,889	0/0:32,0:32:93.28:0,93,1101	0/0:14,0:14:39.03:0,39,448	0/0:18,0:19:49.70:0,50,555	0/1:20,2:21:69.51:70,0,268	0/1:39,3:42:99:288,0,155	1/1:1,1:2:3.01:42,3,0	0/0:20,0:20:57.17:0,57,679	0/0:30,0:30:78.24:0,78,931	0/0:11,0:11:30.07:0,30,344	0/0:27,0:27:81.25:0,81,965	0/1:22,0:22:38.66:39,0,208	0/1:30,4:34:99:215,0,185	0/1:9,0:9:26.80:149,0,27
chr10	69943413	.	GTTT	G	3398.90	PASS	AB=0.900;AC=12;AF=0.214;AN=56;BaseQRankSum=9.613;DP=674;FS=8.803;HRun=3;HaplotypeScore=132.3602;InbreedingCoeff=0.2351;MQ=57.42;MQ0=7;MQRankSum=-7.900;QD=16.66;ReadPosRankSum=0.644;VQSLOD=-0.1263;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:73.42:0,73,1592	0/0:9,0:9:24.08:0,24,535	0/0:43,0:20:54.13:0,54,921	0/0:29,0:24:71.92:0,72,1150	0/0:36,0:36:96.30:0,96,2092	0/0:24,0:24:72.24:0,72,1612	0/0:12,0:12:33.11:0,33,670	0/1:29,0:29:99:307,0,618	0/0:27,0:27:81.25:0,81,1570	0/0:31,0:31:93.29:0,93,1901	0/0:27,0:27:77.73:0,78,1665	0/0:28,0:28:84.28:0,84,1824	0/0:27,0:27:81.20:0,81,1630	0/0:19,0:19:57.19:0,57,1285	0/0:23,0:23:66.22:0,66,1534	0/0:34,0:34:99:0,102,2184	0/1:16,0:16:71.19:71,0,344	0/0:21,0:21:59.77:0,60,1187	0/1:12,6:18:22.23:306,0,22	1/1:8,30:38:87:1222,87,0	0/1:2,0:2:5.86:6,0,11	0/0:24,0:24:72.16:0,72,1349	0/1:28,0:28:36.54:37,0,781	0/1:10,0:10:2.78:3,0,263	0/0:29,0:29:87.29:0,87,1862	0/1:10,13:23:59.95:484,0,60	1/1:10,19:29:49.07:822,49,0	0/1:8,2:10:4.34:141,0,4
chr10	69943416	.	T	TG	2581.49	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-0.914;DP=683;FS=1.881;HRun=5;HaplotypeScore=115.7720;InbreedingCoeff=0.9370;MQ=58.15;MQ0=7;MQRankSum=-2.600;QD=31.10;ReadPosRankSum=-3.582;VQSLOD=1.3700;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:74.63:0,75,748	0/0:8,0:8:24.05:0,24,251	0/0:44,0:21:34.32:0,34,385	0/0:25,0:19:51.01:0,51,511	0/0:36,0:36:99:0,102,1041	0/0:25,0:25:72.08:0,72,741	0/0:14,0:14:35.83:0,36,366	1/1:4,26:30:78.03:911,78,0	0/0:27,0:27:75.07:0,75,781	0/0:32,0:32:96.15:0,96,996	0/0:26,0:27:74.62:0,75,756	0/0:29,0:29:84.13:0,84,868	0/0:27,0:27:78.13:0,78,811	0/0:19,0:19:57.14:0,57,611	0/0:23,0:23:63.05:0,63,645	0/0:35,0:35:99:0,102,1045	1/1:1,15:16:48.15:616,48,0	0/0:20,0:20:59.08:0,59,582	0/0:18,0:17:6.79:0,7,71	0/0:40,0:40:79.74:0,80,343	0/0:2,0:2:4.46:0,4,20	0/0:25,0:25:69.09:0,69,699	1/1:6,20:26:66.98:837,67,0	1/1:1,10:11:32.97:377,33,0	0/0:29,0:29:81.20:0,81,864	0/0:23,0:23:33.01:0,33,170	0/0:33,0:33:55.72:0,56,247	0/0:12,0:12:19.13:0,19,68
chr10	69943421	.	GT	G	409.50	PASS	AB=0.763;AC=6;AF=0.107;AN=56;BaseQRankSum=11.534;DP=682;FS=6.266;HRun=7;HaplotypeScore=116.9940;InbreedingCoeff=0.1270;MQ=60.77;MQ0=7;MQRankSum=-9.146;QD=3.20;ReadPosRankSum=2.965;VQSLOD=-0.1966;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.19:0,72,885	0/0:8,0:8:21.07:0,21,265	0/0:41,1:20:39.04:0,39,431	0/0:24,0:19:45.12:0,45,531	0/0:36,0:36:99:0,105,1282	0/0:25,0:25:69.22:0,69,868	0/0:13,0:13:36.11:0,36,451	0/0:27,0:27:68.45:0,68,512	0/0:26,0:26:69.22:0,69,868	0/0:32,0:32:87.28:0,87,1096	0/0:30,0:29:46.94:0,47,853	0/0:30,0:30:84.12:0,84,977	0/0:27,0:27:78.24:0,78,961	0/0:20,0:20:60.18:0,60,741	0/0:24,0:24:66.12:0,66,780	0/0:34,1:35:68.74:0,69,1163	0/0:16,0:16:47.53:0,48,328	0/0:20,0:20:54.13:0,54,651	0/1:15,4:18:48.92:49,0,72	1/1:14,27:41:2.41:259,2,0	0/0:2,0:2:4.78:0,5,18	0/0:26,0:26:72.21:0,72,881	0/0:24,0:25:64.58:0,65,404	0/0:12,0:12:29.75:0,30,229	0/0:28,0:28:84.26:0,84,1043	0/1:13,10:23:68.31:68,0,97	0/1:17,16:33:48.17:131,0,48	0/1:10,2:12:21.16:21,0,49
chr10	69944488	.	TTCTCTCTCTCTCTCTCTCTC	T	1693.90	PASS	AB=0.870;AC=11;AF=0.196;AN=56;BaseQRankSum=5.911;DP=608;FS=3.984;HRun=0;HaplotypeScore=287.0320;InbreedingCoeff=0.6488;MQ=79.90;MQ0=18;MQRankSum=-2.670;QD=16.45;ReadPosRankSum=0.007;VQSLOD=1.8759;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:24.08:0,24,837	0/0:9,0:10:15.05:0,15,572	0/0:38,0:30:3.48:0,3,49	0/0:54,0:30:3.08:0,3,32	0/0:24,0:27:30.10:0,30,857	0/0:28,0:30:30.09:0,30,1417	0/0:16,0:18:30.10:0,30,1540	0/0:28,0:27:14.64:0,15,331	0/0:16,0:15:16.30:0,16,841	0/0:25,0:25:36.12:0,36,1756	0/0:18,0:17:21.07:0,21,775	0/0:15,0:15:33.11:0,33,1774	0/0:18,0:17:27.09:0,27,1481	0/0:28,0:28:39.13:0,39,2712	0/0:17,0:21:32.94:0,33,1959	0/0:17,0:17:18.06:0,18,1125	0/0:21,0:19:33.11:0,33,2130	0/0:21,0:21:32.47:0,32,968	1/1:15,6:18:14.61:560,15,0	0/1:17,3:19:99:154,0,177	1/1:15,0:14:2.99:24,3,0	0/0:19,0:19:15.05:0,15,848	0/0:21,0:23:30.10:0,30,1573	0/0:18,0:23:36.12:0,36,1888	0/0:9,0:9:9.03:0,9,505	1/1:18,0:18:2.98:22,3,0	1/1:11,8:21:21.07:1077,21,0	1/1:8,0:7:0.47:1,0,0
chr10	69945746	.	CT	C	1233.67	PASS	AB=0.938;AC=10;AF=0.179;AN=56;BaseQRankSum=5.633;DP=615;FS=2.560;HRun=11;HaplotypeScore=75.8455;InbreedingCoeff=0.7494;MQ=73.79;MQ0=0;MQRankSum=-1.251;QD=9.64;ReadPosRankSum=1.793;VQSLOD=3.0310;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,30:37:7.73:587,8,0	1/1:1,0:11:20.37:59,20,0	0/0:19,0:19:25.97:0,26,255	0/1:12,1:11:11.93:12,0,71	1/1:4,18:23:40.90:320,41,0	0/0:27,2:33:17.86:0,18,627	0/0:25,0:25:29.48:0,29,509	0/0:31,1:32:47.34:0,47,674	0/0:15,0:15:33.08:0,33,352	0/0:18,2:20:17.47:0,17,386	0/0:15,0:16:35.25:0,35,409	0/0:20,0:21:50.96:0,51,526	0/0:31,0:31:72.18:0,72,768	0/0:24,1:25:15.32:0,15,550	0/0:21,0:21:48.12:0,48,512	0/0:24,1:28:35.37:0,35,560	0/0:21,1:22:38.51:0,39,608	1/1:6,20:26:24.93:411,25,0	0/0:5,0:16:35.11:0,35,175	0/0:4,0:21:46.58:0,47,268	0/0:7,0:20:23.07:0,23,135	0/1:17,1:18:6.47:6,0,312	0/0:19,0:19:48.10:0,48,499	0/0:18,0:18:48.11:0,48,503	0/0:27,1:28:23.28:0,23,649	0/0:3,0:17:42.14:0,42,253	0/0:6,0:27:53.58:0,54,271	0/0:4,0:12:17.08:0,17,86
chr10	69946328	.	AGAGTGAGTGAGT	A	5251.37	PASS	AB=0.639;AC=15;AF=0.268;AN=56;BaseQRankSum=12.157;DP=677;FS=0.488;HRun=0;HaplotypeScore=229.1760;InbreedingCoeff=0.6852;MQ=60.00;MQ0=6;MQRankSum=-10.236;QD=27.93;ReadPosRankSum=1.813;VQSLOD=3.8706;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:31:18.92:19,0,65	0/0:5,0:5:9.03:0,9,175	0/0:29,0:20:12.04:0,12,468	0/0:31,0:23:5.75:0,6,61	0/0:6,0:15:1.43:0,1,81	0/0:42,0:42:72.25:0,72,3494	0/0:27,0:27:60.15:0,60,2457	0/0:23,0:27:27.09:0,27,668	0/0:30,0:30:66.23:0,66,3523	0/0:30,0:30:57.18:0,57,2365	0/0:16,0:16:30.09:0,30,1360	0/0:32,0:32:60.18:0,60,2842	0/0:30,0:30:78.27:0,78,3789	0/0:39,0:39:96.33:0,96,5031	0/0:29,0:29:69.24:0,69,3502	0/0:29,0:29:54.19:0,54,2591	0/1:11,0:26:1.05:1,0,41	0/1:6,0:13:0.94:1,0,35	1/1:13,7:20:21.07:723,21,0	1/1:3,8:11:12.04:417,12,0	1/1:7,11:18:12.04:328,12,0	0/0:22,0:22:42.14:0,42,2080	0/0:12,0:19:2.95:0,3,116	0/0:6,0:18:8.76:0,9,76	0/0:17,0:17:36.10:0,36,1404	1/1:8,23:31:63.08:1684,63,0	1/1:5,19:24:39.07:1348,39,0	1/1:5,9:14:21.07:729,21,0
chr10	69946631	.	ATCTCTCTCTC	A	552.20	PASS	AB=0.842;AC=13;AF=0.342;AN=38;BaseQRankSum=4.951;DP=290;FS=1.361;HRun=0;HaplotypeScore=79.6211;InbreedingCoeff=0.4153;MQ=70.70;MQ0=8;MQRankSum=-3.277;QD=5.81;ReadPosRankSum=0.858;VQSLOD=1.5732;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,1:13:13.15:121,0,13	./.	./.	0/1:18,0:11:0:0,0,0	./.	0/0:14,0:13:3.01:0,3,126	0/0:10,0:12:18.06:0,18,676	./.	0/0:9,0:9:9.01:0,9,309	0/0:11,0:11:18.06:0,18,753	0/0:13,0:13:6.02:0,6,281	0/0:13,0:13:15.05:0,15,672	./.	0/0:10,0:10:18.06:0,18,565	0/0:8,0:8:9.03:0,9,309	0/0:8,0:13:9.03:0,9,308	1/1:3,0:6:3.01:70,3,0	0/0:4,0:5:3.01:0,3,37	1/1:8,3:10:3:65,3,0	./.	0/1:13,6:19:53.59:54,0,67	0/0:7,0:7:6.02:0,6,175	./.	1/1:7,0:9:5.75:73,6,0	./.	1/1:5,2:7:6.02:119,6,0	./.	1/1:8,2:9:6.02:178,6,0
chr10	69946972	.	C	CT	8103.45	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-13.473;DP=658;FS=10.730;HRun=0;HaplotypeScore=61.2025;InbreedingCoeff=0.9998;MQ=69.52;MQ0=0;MQRankSum=-2.825;QD=42.88;ReadPosRankSum=-0.660;VQSLOD=4.4105;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:69.24:1102,69,0	1/1:0,12:12:33.11:527,33,0	0/0:21,0:21:55.80:0,56,666	0/0:20,0:20:56.64:0,57,715	1/1:1,25:26:75.26:1196,75,0	0/0:27,0:27:81.26:0,81,1114	0/0:25,0:25:72.23:0,72,991	1/1:0,20:20:60.18:912,60,0	0/0:20,0:20:60.20:0,60,837	0/0:30,0:30:87.26:0,87,1135	0/0:20,0:20:57.18:0,57,778	0/0:39,0:39:99:0,114,1575	0/0:28,0:28:84.28:0,84,1172	0/0:34,0:34:99:0,99,1366	0/0:37,0:37:99:0,108,1492	0/0:24,0:24:72.23:0,72,990	1/1:1,30:31:81.28:1294,81,0	1/1:1,30:31:86.78:1351,87,0	0/0:17,0:17:48.16:0,48,671	0/0:22,0:22:66.22:0,66,921	0/0:14,0:14:42.13:0,42,569	0/0:18,0:18:54.17:0,54,738	1/1:0,22:22:63.21:1005,63,0	1/1:0,19:19:45.15:718,45,0	0/0:17,0:17:48.16:0,48,671	0/0:22,0:22:63.20:0,63,866	0/0:25,0:25:66.21:0,66,906	0/0:9,0:9:27.09:0,27,377
chr10	69948454	.	GCACAGGGA	G	268.36	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.133;DP=743;FS=6.817;HRun=0;HaplotypeScore=180.3586;InbreedingCoeff=0.8722;MQ=73.21;MQ0=0;MQRankSum=-1.020;QD=4.71;ReadPosRankSum=-0.559;VQSLOD=1.6555;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,138,4712	0/0:10,0:10:30.10:0,30,1139	0/0:40,0:31:56.34:0,56,1327	0/0:42,0:32:43.29:0,43,1320	0/0:37,0:37:99:0,102,3652	0/0:22,0:22:51.15:0,51,1893	0/0:23,0:23:51.16:0,51,1671	0/0:34,0:34:66.19:0,66,1957	0/0:35,0:35:81.24:0,81,2961	0/0:35,0:35:87.17:0,87,3095	0/0:22,0:22:60.21:0,60,2276	0/0:27,0:27:66.20:0,66,2408	0/0:24,0:24:57.20:0,57,2399	0/0:25,0:25:63.22:0,63,2515	0/0:27,0:27:69.20:0,69,2433	0/0:27,0:27:69.22:0,69,2733	1/1:2,12:14:5.93:95,6,0	0/0:10,0:10:24.08:0,24,951	0/0:20,0:19:33.06:0,33,1030	0/0:20,0:20:48.12:0,48,1663	0/0:40,0:40:99:0,114,4063	0/0:22,0:22:42.13:0,42,1555	1/1:6,9:15:6.02:142,6,0	1/1:5,23:28:5.82:148,6,0	0/0:20,0:20:57.20:0,57,2149	0/0:37,0:37:93.28:0,93,3363	0/0:22,0:22:54.15:0,54,1763	0/0:7,0:7:21.04:0,21,598
chr10	69948827	.	G	GAA	2634.07	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=3.603;DP=635;FS=17.174;HRun=10;HaplotypeScore=85.6428;InbreedingCoeff=0.9376;MQ=69.18;MQ0=2;MQRankSum=-0.752;QD=15.05;ReadPosRankSum=-2.498;VQSLOD=0.1034;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:22:41.07:530,41,0	0/0:17,0:17:45.05:0,45,454	0/0:15,0:10:10.71:0,11,84	0/1:11,0:9:1.17:1,0,6	1/1:10,26:39:85.48:1061,85,0	0/0:19,0:19:41.04:0,41,443	0/0:20,0:20:41.99:0,42,415	1/1:10,3:40:19.30:296,19,0	0/0:17,0:19:35.53:0,36,469	0/0:33,0:36:49.32:0,49,757	0/0:22,0:22:37.03:0,37,481	0/0:14,0:14:30.01:0,30,295	0/0:20,0:21:47.70:0,48,539	0/0:24,0:24:66.06:0,66,648	0/0:39,0:40:99:0,102,1082	0/0:26,0:26:75.14:0,75,761	1/1:4,2:24:33.04:313,33,0	1/1:1,5:6:18.06:254,18,0	0/0:16,0:17:35.79:0,36,417	0/0:27,0:29:68.86:0,69,754	0/0:15,0:15:33.04:0,33,335	0/0:23,0:24:50.79:0,51,564	1/1:11,2:21:20.76:215,21,0	1/1:1,1:11:15.02:159,15,0	0/0:32,0:32:81.10:0,81,820	0/0:28,0:31:53.48:0,53,638	0/0:30,0:29:40.10:0,40,573	0/0:9,0:9:14.98:0,15,152
chr10	69950054	.	CAG	C	1178.54	PASS	AB=0.907;AC=8;AF=0.143;AN=56;BaseQRankSum=8.516;DP=772;FS=14.090;HRun=0;HaplotypeScore=134.5130;InbreedingCoeff=0.5118;MQ=60.24;MQ0=15;MQRankSum=1.000;QD=8.48;ReadPosRankSum=-2.907;VQSLOD=2.1655;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,3:30:57.04:564,57,0	0/1:7,2:9:15.25:15,0,226	0/0:38,0:15:28.56:0,29,388	0/0:51,0:21:47.15:0,47,697	0/1:15,1:16:9.90:74,0,10	0/0:25,0:25:68.21:0,68,1063	0/0:35,0:35:75.25:0,75,1348	1/1:35,0:33:75.58:565,76,0	0/0:22,0:21:57.17:0,57,964	0/0:28,0:27:72.11:0,72,1039	0/0:25,0:25:65.43:0,65,927	0/0:20,0:20:43.23:0,43,942	0/0:22,0:22:59.71:0,60,940	0/0:26,0:26:26.92:0,27,877	0/0:28,0:28:66.17:0,66,948	0/0:30,0:30:74.40:0,74,1076	0/1:17,3:20:11.59:100,0,12	0/0:20,1:21:47.59:0,48,693	0/0:30,0:29:66.12:0,66,1028	0/0:30,0:30:71.97:0,72,1057	0/0:34,0:32:54.05:0,54,693	0/0:39,0:39:99:0,105,1679	0/0:26,0:26:2.77:0,3,18	0/1:29,0:29:0:0,0,0	0/0:35,0:35:69.17:0,69,1054	0/0:27,0:26:71.54:0,72,1024	0/0:32,0:30:87.75:0,88,1165	0/0:9,0:9:14.99:0,15,199
chr10	69950056	.	G	GACACAC	758.67	PASS	AB=0.961;AC=7;AF=0.125;AN=56;BaseQRankSum=8.042;DP=767;FS=14.669;HRun=0;HaplotypeScore=187.1113;InbreedingCoeff=0.4981;MQ=59.22;MQ0=16;MQRankSum=-0.149;QD=6.02;ReadPosRankSum=-4.108;VQSLOD=0.5090;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:41.40:80,0,41	0/0:9,0:9:14.95:0,15,244	0/0:36,0:13:31.60:0,32,450	0/0:50,0:20:35.67:0,36,725	0/1:13,0:15:7.69:80,0,8	0/0:26,0:26:68.75:0,69,1255	0/0:33,0:33:77.43:0,77,1584	1/1:4,0:32:49.82:399,50,0	0/0:22,0:21:57.17:0,57,1255	0/0:27,0:26:72.19:0,72,1403	0/0:25,0:25:66.09:0,66,1296	0/0:22,0:22:43.16:0,43,1161	0/0:23,0:23:62.71:0,63,1188	0/0:25,0:25:53.29:0,53,1088	0/0:28,0:28:66.15:0,66,1449	0/0:30,0:30:75.53:0,76,1573	0/1:20,0:20:6.68:224,0,7	0/0:21,0:21:22.39:0,22,611	0/0:29,0:28:72.14:0,72,1315	0/0:30,0:30:72.20:0,72,1442	0/0:32,0:30:53.94:0,54,875	0/0:39,0:39:99:0,105,2156	1/1:1,25:26:2.68:107,3,0	0/0:3,24:32:0.47:0,0,1	0/0:34,0:34:69.17:0,69,1355	0/0:27,0:25:72.07:0,72,1368	0/0:32,0:30:92.82:0,93,1675	0/0:9,0:9:15:0,15,281
chr10	69950062	.	CAT	C	1720.22	PASS	AB=0.975;AC=21;AF=0.375;AN=56;BaseQRankSum=13.255;DP=746;FS=40.631;HRun=0;HaplotypeScore=128.9636;InbreedingCoeff=-0.1011;MQ=56.88;MQ0=16;MQRankSum=1.932;QD=3.74;ReadPosRankSum=-0.282;VQSLOD=0.7668;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,2:32:57.04:616,57,0	0/1:9,0:9:17.82:18,0,103	0/0:32,0:10:10.13:0,10,124	0/0:44,0:17:31.01:0,31,293	0/1:17,0:17:5.39:75,0,5	0/0:25,0:25:40.76:0,41,671	0/0:35,0:35:74.33:0,74,982	1/1:35,0:34:65.26:490,65,0	0/0:21,0:20:45.78:0,46,662	0/1:27,0:26:27.38:27,0,314	0/1:24,1:25:68.30:68,0,257	0/0:22,0:22:26.84:0,27,624	0/0:22,0:22:57.49:0,57,800	0/1:20,5:25:0.79:1,0,630	0/1:27,0:27:36.49:36,0,152	0/1:28,1:29:79.36:79,0,289	0/1:24,0:24:7.04:121,0,7	0/0:19,1:20:19.82:0,20,420	0/0:25,0:24:37.30:0,37,479	0/1:28,0:28:33.02:33,0,307	0/1:30,0:27:58.41:58,0,98	0/0:39,0:39:51.43:0,51,955	0/1:26,1:27:9.34:37,0,9	1/1:33,0:33:2.90:23,3,0	0/1:29,0:29:19.76:20,0,265	0/1:24,1:23:78.85:79,0,250	0/1:26,2:27:99:99,0,259	0/1:9,0:9:9.32:9,0,68
chr10	69950064	.	TAC	T	2648.69	PASS	AB=0.848;AC=24;AF=0.444;AN=54;BaseQRankSum=3.787;DP=734;FS=3.543;HRun=0;HaplotypeScore=124.6591;InbreedingCoeff=0.0903;MQ=56.83;MQ0=17;MQRankSum=1.770;QD=5.75;ReadPosRankSum=0.973;VQSLOD=3.1109;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:16.15:81,0,16	0/1:9,0:9:5.53:6,0,40	./.	0/0:44,0:17:1.25:0,1,3	0/0:17,0:17:18.93:0,19,149	0/0:21,3:24:2.33:0,2,418	0/0:29,5:34:11.84:0,12,552	0/1:37,0:36:0.59:1,0,64	0/0:21,0:20:3.50:0,4,460	1/1:15,11:26:4.68:264,5,0	0/1:13,11:25:12.74:261,0,13	0/1:19,0:20:2.13:2,0,392	0/0:19,0:22:34.02:0,34,549	0/1:24,0:24:1.96:2,0,373	1/1:9,14:27:38.44:355,38,0	0/1:13,15:29:9.35:309,0,9	0/1:24,0:24:32.62:33,0,76	0/0:16,0:20:35.43:0,35,315	1/1:20,2:21:6.01:67,6,0	0/1:17,12:29:18.55:217,0,19	1/1:11,15:26:8.65:251,9,0	0/1:31,5:37:51.62:52,0,516	0/0:28,0:28:6.58:0,7,56	0/0:32,0:32:0:0,0,0	1/1:13,16:29:21.06:233,21,0	1/1:14,9:24:35.57:325,36,0	0/1:16,8:27:5.04:295,0,5	0/1:3,6:9:10.93:58,0,11
chr10	69951413	.	GGT	G	1389.41	PASS	AB=0.908;AC=29;AF=0.558;AN=52;BaseQRankSum=-0.036;DP=611;FS=3.535;HRun=0;HaplotypeScore=94.8657;InbreedingCoeff=0.3868;MQ=68.27;MQ0=7;MQRankSum=0.433;QD=3.45;ReadPosRankSum=2.430;VQSLOD=2.2235;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:32:8.64:47,9,0	0/0:9,0:14:3:0,3,26	./.	./.	0/1:15,0:16:0:0,0,0	1/1:12,1:13:6:54,6,0	1/1:17,5:24:14.77:141,15,0	0/0:23,0:22:3.01:0,3,37	1/1:14,5:20:14.87:143,15,0	1/1:18,1:21:5.85:46,6,0	0/0:8,0:8:0:0,0,0	1/1:17,9:26:15.04:162,15,0	0/1:14,4:19:26.96:96,0,27	1/1:18,2:21:8.86:79,9,0	1/1:19,4:24:15.81:144,16,0	1/1:14,6:22:17.88:176,18,0	0/0:21,0:22:20.99:0,21,211	0/1:21,0:22:0.68:1,0,81	0/1:14,2:15:35.33:56,0,35	0/0:8,0:8:15.05:0,15,214	0/1:38,0:38:21.37:21,0,83	1/1:13,5:20:17.71:157,18,0	0/0:14,0:15:14.68:0,15,155	0/0:33,0:38:9.67:0,10,284	1/1:20,3:27:23.56:203,24,0	0/1:17,2:18:23.31:23,0,58	0/1:18,3:21:11.29:11,0,183	0/0:13,0:13:12.01:0,12,154
chr10	69951482	.	T	TG	1556.57	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.100;DP=557;FS=1.223;HRun=7;HaplotypeScore=78.0602;InbreedingCoeff=0.9600;MQ=78.55;MQ0=1;MQRankSum=-1.301;QD=22.89;ReadPosRankSum=1.779;VQSLOD=3.8281;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:87.03:0,87,827	0/0:6,0:6:18.02:0,18,171	0/0:16,0:15:39.04:0,39,369	0/0:24,0:20:39.24:0,39,347	0/0:23,0:23:45.05:0,45,427	0/0:20,0:20:57.09:0,57,549	0/0:35,0:35:99:0,102,985	0/0:17,0:17:36.04:0,36,343	0/0:25,0:25:69.11:0,69,666	0/0:18,0:18:51.08:0,51,492	0/0:5,0:5:15.01:0,15,140	0/0:25,0:25:65.10:0,65,606	0/0:27,0:27:72.11:0,72,694	0/0:23,0:23:57.06:0,57,545	0/0:11,0:11:24.03:0,24,232	0/0:22,0:22:57.09:0,57,550	1/1:3,16:19:39.12:471,39,0	0/0:16,0:16:35.70:0,36,347	0/0:10,0:10:9.22:0,9,236	0/0:15,0:15:42.07:0,42,405	0/0:27,0:27:66.10:0,66,636	0/0:17,0:17:51.08:0,51,492	1/1:2,5:7:15.05:181,15,0	1/1:9,33:42:64.30:1045,64,0	0/0:22,0:22:48.02:0,48,449	0/0:24,0:24:66.09:0,66,631	0/0:18,0:18:39.06:0,39,376	0/0:7,0:7:15.02:0,15,145
chr10	69954529	.	C	CCACACA	992	PASS	AB=0.908;AC=21;AF=0.404;AN=52;BaseQRankSum=-1.191;DP=616;FS=23.835;HRun=0;HaplotypeScore=144.2316;InbreedingCoeff=0.3154;MQ=63.97;MQ0=20;MQRankSum=-1.491;QD=3.63;ReadPosRankSum=-0.627;VQSLOD=1.1656;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:7.78:0,8,64	1/1:6,4:11:2.93:95,3,0	./.	./.	0/0:12,0:13:6.01:0,6,69	0/0:22,0:22:2.74:0,3,42	0/0:23,0:22:8.81:0,9,145	1/1:20,0:19:4.96:14,5,0	0/1:13,0:12:1.67:2,0,110	0/0:19,0:18:3:0,3,28	0/0:12,0:12:9.03:0,9,156	0/0:18,0:18:9.03:0,9,164	0/0:28,0:27:4.85:0,5,521	0/0:20,0:20:8.16:0,8,177	0/0:13,0:13:3.01:0,3,60	0/0:27,0:27:24.03:0,24,408	0/1:24,0:25:35.09:35,0,53	0/1:21,0:27:0.29:0,0,30	1/1:11,0:10:3.01:39,3,0	0/1:18,0:21:24.95:163,0,25	1/1:34,0:39:25.31:392,25,0	0/0:22,0:22:6:0,6,89	1/1:17,0:17:6.01:95,6,0	1/1:26,9:42:3.01:69,3,0	0/0:23,0:23:18.14:0,18,259	0/1:21,0:22:39.56:131,0,40	1/1:12,0:12:5.40:105,5,0	1/1:8,0:8:1.09:3,1,0
chr10	69956995	.	CAAA	C	2271.57	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=1.776;DP=588;FS=2.121;HRun=15;HaplotypeScore=100.6706;InbreedingCoeff=0.9883;MQ=72.89;MQ0=1;MQRankSum=0.408;QD=18.77;ReadPosRankSum=3.786;VQSLOD=3.0789;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:22:47.55:0,48,689	0/0:4,0:13:23.95:0,24,215	0/0:35,0:22:16.20:0,16,262	0/0:26,0:16:23.73:0,24,283	0/0:19,0:25:53.50:0,54,736	0/0:24,0:27:57.11:0,57,860	0/0:9,0:9:24.08:0,24,412	0/0:20,0:29:48.21:0,48,519	0/0:20,0:23:57.16:0,57,887	0/0:32,0:35:78.17:0,78,1221	0/0:16,0:19:42.05:0,42,610	0/0:16,0:16:39.12:0,39,640	0/0:16,0:19:36.09:0,36,537	0/0:13,0:15:37.32:0,37,546	0/0:9,0:15:28.32:0,28,454	0/0:12,0:13:33.04:0,33,447	0/0:10,0:24:26.85:0,27,201	0/0:6,0:18:27.06:0,27,377	1/1:5,13:18:41.08:443,41,0	1/1:6,16:24:50.86:555,51,0	1/1:3,2:10:11.73:116,12,0	0/0:14,0:19:39.04:0,39,530	0/0:11,0:23:37.06:0,37,354	0/0:12,0:21:52.10:0,52,416	0/0:10,0:11:24.04:0,24,339	1/1:6,13:19:35.85:389,36,0	1/1:9,20:35:54.89:601,55,0	1/1:4,10:14:32.97:354,33,0
chr10	69957378	.	AT	A	3527.37	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.770;DP=747;FS=4.943;HRun=3;HaplotypeScore=71.0466;InbreedingCoeff=0.9968;MQ=86.28;MQ0=0;MQRankSum=-2.568;QD=34.58;ReadPosRankSum=1.502;VQSLOD=4.3895;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,50:51:99:1780,144,0	1/1:0,17:17:48.15:595,48,0	0/0:26,0:26:72.24:0,72,1031	0/0:25,0:25:68.69:0,69,913	1/1:0,34:34:93.29:1153,93,0	0/0:25,0:25:72.24:0,72,1037	0/0:23,0:23:66.17:0,66,907	0/0:36,0:36:99:0,102,1469	0/0:38,0:38:99:0,108,1553	0/0:33,0:33:99:0,99,1426	0/0:25,0:25:72.24:0,72,1037	0/0:28,0:28:78.26:0,78,1122	0/0:28,0:28:81.26:0,81,1146	0/0:17,0:17:51.17:0,51,734	0/0:30,0:30:87.27:0,87,1218	0/0:29,0:29:81.27:0,81,1165	0/0:26,0:26:75.25:0,75,1080	0/0:11,0:11:27.09:0,27,382	0/0:15,0:15:42.14:0,42,605	0/0:32,0:32:93.27:0,93,1315	0/0:24,0:24:66.15:0,66,888	0/0:22,0:22:63.20:0,63,882	0/0:20,0:20:57.18:0,57,804	0/0:28,0:28:78.26:0,78,1120	0/0:22,0:22:60.20:0,60,864	0/0:36,0:36:99:0,108,1556	0/0:40,0:40:99:0,114,1640	0/0:6,0:6:18.06:0,18,258
chr10	69958677	.	CTT	C	1645.39	PASS	AB=0.725;AC=16;AF=0.296;AN=54;BaseQRankSum=1.253;DP=539;FS=1.030;HRun=15;HaplotypeScore=101.5146;InbreedingCoeff=0.5417;MQ=64.91;MQ0=10;MQRankSum=-0.903;QD=7.55;ReadPosRankSum=2.984;VQSLOD=1.1994;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:0.47:0,0,1	./.	0/0:44,0:16:7.23:0,7,88	0/1:52,2:24:38.42:38,0,118	0/0:20,0:20:0:0,0,0	0/0:19,0:20:41.32:0,41,423	0/0:10,0:10:12.04:0,12,153	0/1:7,0:21:0.97:43,0,1	0/0:7,0:7:11.99:0,12,127	0/0:23,0:27:29.30:0,29,438	0/0:17,0:19:42.90:0,43,459	0/0:16,0:13:21.57:0,22,221	0/0:10,0:10:17.71:0,18,187	0/0:19,0:16:26.67:0,27,238	0/0:20,0:19:35.97:0,36,403	0/0:28,0:26:55.37:0,55,647	1/1:11,5:15:5.34:167,5,0	0/0:4,0:4:4.71:0,5,34	1/1:15,11:25:12.90:308,13,0	0/1:14,11:22:29.89:180,0,30	1/1:6,7:13:9.98:115,10,0	0/0:16,0:16:22.94:0,23,242	0/1:4,5:9:19.75:137,0,20	1/1:5,2:7:8.93:79,9,0	0/0:20,0:23:40.33:0,40,400	1/1:9,19:25:41.99:482,42,0	1/1:6,13:19:15.09:269,15,0	0/0:3,0:3:2.97:0,3,21
chr10	69958708	.	TGC	T	155.24	PASS	AB=0.925;AC=13;AF=0.260;AN=50;BaseQRankSum=2.790;DP=544;FS=12.720;HRun=0;HaplotypeScore=102.1393;InbreedingCoeff=-0.0646;MQ=50.17;MQ0=23;MQRankSum=-5.866;QD=0.70;ReadPosRankSum=-0.491;VQSLOD=1.0332;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:66,0:13:5.50:6,0,44	0/0:85,1:16:19.42:0,19,179	./.	0/0:21,0:21:14.89:0,15,394	0/0:11,0:11:17.23:0,17,212	0/0:22,2:24:30.08:0,30,598	0/0:6,0:6:8.88:0,9,70	0/0:23,0:21:36.12:0,36,528	0/0:18,1:16:23.55:0,24,288	0/0:20,3:19:4.26:0,4,286	0/0:13,1:14:1.36:0,1,113	0/1:13,3:13:29.37:29,0,131	0/1:15,1:15:38.10:38,0,186	0/0:19,1:19:46.01:0,46,486	0/1:17,2:17:24.86:25,0,127	1/1:3,2:5:1.77:6,2,0	0/1:29,2:30:52.47:52,0,501	0/1:24,1:22:43.93:44,0,438	0/1:5,1:6:39.54:40,0,41	0/0:17,0:16:14.06:0,14,393	0/0:16,0:15:13.14:0,13,232	0/1:8,0:7:1.96:2,0,25	0/0:18,2:20:39.39:0,39,411	0/1:25,3:25:5.97:6,0,625	0/0:19,0:17:37.60:0,38,513	1/1:0,2:2:3.01:41,3,0
chr10	69958812	.	GC	G	2239.04	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.768;DP=532;FS=8.590;HRun=5;HaplotypeScore=58.4987;InbreedingCoeff=0.8634;MQ=62.68;MQ0=22;MQRankSum=-0.607;QD=29.85;ReadPosRankSum=2.987;VQSLOD=4.0552;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:5.48:0,5,24	0/0:4,0:4:3:0,3,28	0/0:32,1:11:33.07:0,33,411	0/0:31,0:10:26.84:0,27,312	0/0:9,0:9:11.89:0,12,84	0/0:23,0:23:66.22:0,66,903	0/0:15,0:15:39.13:0,39,533	0/0:21,0:21:57.19:0,57,779	0/0:12,0:12:33.10:0,33,435	0/0:20,0:20:57.18:0,57,763	0/0:14,0:14:42.14:0,42,574	0/0:20,0:20:57.15:0,57,757	0/0:12,0:10:30.10:0,30,410	0/0:26,0:26:75.25:0,75,1025	0/0:23,0:23:66.18:0,66,881	0/0:21,0:20:60.09:0,60,746	1/1:0,31:31:84.24:952,84,0	0/0:22,0:22:66.22:0,66,899	0/0:15,0:14:42.13:0,42,559	0/0:14,0:14:42.14:0,42,570	0/0:28,0:28:81.25:0,81,1090	0/0:18,0:18:45.15:0,45,615	1/1:0,16:16:45.13:510,45,0	1/1:0,28:28:81.23:919,81,0	0/0:16,0:16:45.15:0,45,615	0/0:24,0:24:72.22:0,72,968	0/0:15,0:15:45.14:0,45,593	0/0:4,0:4:6.02:0,6,82
chr10	69959703	.	T	TG	798.68	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.108;DP=428;FS=8.497;HRun=5;HaplotypeScore=45.6797;InbreedingCoeff=0.7743;MQ=52.70;MQ0=14;MQRankSum=-1.631;QD=15.36;ReadPosRankSum=-1.947;VQSLOD=1.8383;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:19:48.11:609,48,0	1/1:3,3:6:9.03:118,9,0	0/0:4,0:2:6.01:0,6,61	0/1:9,0:3:14.70:15,0,18	1/1:2,10:11:15.05:197,15,0	0/0:8,0:8:15.04:0,15,161	0/0:15,0:15:42.11:0,42,451	0/0:15,0:5:12.03:0,12,129	0/0:17,0:17:39.10:0,39,419	0/0:18,0:17:48.11:0,48,508	0/0:15,0:14:36.09:0,36,387	0/0:19,0:19:51.11:0,51,538	0/0:16,0:15:42.11:0,42,451	0/0:24,0:24:60.13:0,60,637	0/0:19,0:19:48.12:0,48,514	0/0:18,0:18:51.13:0,51,548	0/0:20,0:20:51.13:0,51,548	0/0:11,0:11:30.06:0,30,313	0/0:11,0:6:18.05:0,18,193	0/0:14,0:14:33.04:0,33,342	0/0:29,0:27:69.15:0,69,733	0/0:13,0:12:33.08:0,33,353	0/0:10,0:10:30.08:0,30,322	0/0:20,0:20:51.12:0,51,548	0/0:23,0:23:60.15:0,60,643	0/0:12,0:11:24.06:0,24,258	0/0:15,0:15:33.01:0,33,330	0/0:10,0:10:30.07:0,30,319
chr10	69961479	.	T	TCTTTC	563.42	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.654;DP=785;FS=2.998;HRun=0;HaplotypeScore=170.1028;InbreedingCoeff=0.9939;MQ=78.52;MQ0=0;MQRankSum=-2.941;QD=37.56;ReadPosRankSum=0.223;VQSLOD=3.4799;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,2003	1/1:0,14:15:21.07:656,21,0	0/0:20,0:20:45.25:0,45,1004	0/0:25,0:24:47.55:0,48,1040	0/0:30,0:30:83.86:0,84,1666	0/0:30,0:30:87.30:0,87,1827	0/0:22,0:22:54.17:0,54,1095	0/0:35,0:35:96.31:0,96,1904	0/0:17,0:17:48.16:0,48,1022	0/0:27,0:27:75.21:0,75,1506	0/0:27,0:27:69.23:0,69,1402	0/0:31,0:31:84.27:0,84,1695	0/0:35,0:35:99:0,105,2120	0/0:23,0:23:63.21:0,63,1256	0/0:30,0:30:87.26:0,87,1628	0/0:34,0:33:99:0,99,2030	0/0:25,0:25:69.02:0,69,1403	0/0:23,0:23:66.15:0,66,1288	0/0:19,0:19:57.15:0,57,1011	0/0:33,0:33:96.02:0,96,1849	0/0:43,0:43:99:0,126,2523	0/0:26,0:26:72.25:0,72,1526	0/0:26,0:26:75.26:0,75,1563	0/0:32,0:32:90.29:0,90,1804	0/0:38,0:38:99:0,111,2262	0/0:38,0:38:99:0,108,2118	0/0:38,0:38:99:0,102,2099	0/0:8,0:8:24.08:0,24,507
chr10	69962997	.	ACTT	A	520.01	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.086;DP=673;FS=1.142;HRun=0;HaplotypeScore=93.0304;InbreedingCoeff=0.9986;MQ=91.20;MQ0=0;MQRankSum=-2.702;QD=43.33;ReadPosRankSum=0.718;VQSLOD=5.1414;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,2875	1/1:0,12:12:33.11:615,33,0	0/0:28,0:28:81.26:0,81,1862	0/0:26,0:26:75.25:0,75,1688	0/0:27,0:27:78.27:0,78,1877	0/0:20,0:20:60.21:0,60,1455	0/0:25,0:25:75.26:0,75,1816	0/0:33,0:33:99:0,99,2414	0/0:29,0:29:87.30:0,87,2066	0/0:21,0:21:63.22:0,63,1554	0/0:22,0:22:63.22:0,63,1543	0/0:20,0:20:60.21:0,60,1476	0/0:26,0:26:78.27:0,78,1847	0/0:24,0:24:72.25:0,72,1761	0/0:24,0:24:69.24:0,69,1701	0/0:19,0:19:57.20:0,57,1395	0/0:16,0:16:48.16:0,48,1169	0/0:9,0:9:27.09:0,27,665	0/0:19,0:19:57.20:0,57,1347	0/0:30,0:30:90.31:0,90,2158	0/0:28,0:28:84.29:0,84,2045	0/0:24,0:24:72.25:0,72,1765	0/0:18,0:18:54.19:0,54,1299	0/0:21,0:21:57.20:0,57,1405	0/0:25,0:25:75.26:0,75,1849	0/0:32,0:32:96.32:0,96,2318	0/0:42,0:41:99:0,126,3021	0/0:12,0:12:36.10:0,36,835
chr10	69963601	.	CTG	C	3636.93	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.285;DP=861;FS=3.295;HRun=0;HaplotypeScore=101.7374;InbreedingCoeff=0.9992;MQ=90.17;MQ0=2;MQRankSum=-3.256;QD=44.90;ReadPosRankSum=-1.391;VQSLOD=4.5625;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,187,3727	1/1:0,14:14:36.12:587,36,0	0/0:29,0:28:84.29:0,84,1675	0/0:39,0:39:99:0,117,2222	0/0:30,0:30:87.27:0,87,1692	0/0:23,0:23:66.23:0,66,1327	0/0:24,0:24:72.23:0,72,1400	1/1:0,36:36:99:1729,108,0	0/0:25,0:25:75.24:0,75,1472	0/0:43,0:43:99:0,129,2517	0/0:23,0:23:66.23:0,66,1329	0/0:48,0:48:99:0,141,2863	0/0:34,0:34:99:0,102,2021	0/0:34,0:34:99:0,102,1994	0/0:47,0:47:99:0,135,2681	0/0:33,0:33:99:0,99,2009	0/0:19,0:19:57.20:0,57,1143	1/1:0,31:30:81.28:1321,81,0	0/0:28,0:28:84.27:0,84,1663	0/0:22,0:22:66.21:0,66,1290	0/0:32,0:32:96.30:0,96,1855	0/0:35,0:35:99:0,105,2084	0/0:15,0:15:39.13:0,39,788	0/0:25,0:25:75.26:0,75,1505	0/0:36,0:36:99:0,108,2172	0/0:35,0:35:99:0,105,2089	0/0:31,0:31:87.27:0,87,1681	0/0:8,0:8:24.07:0,24,450
chr10	69963892	.	A	AG	1605.51	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.604;DP=577;FS=3.453;HRun=7;HaplotypeScore=73.6696;InbreedingCoeff=0.9912;MQ=75.35;MQ0=2;MQRankSum=-1.182;QD=24.70;ReadPosRankSum=1.392;VQSLOD=4.2169;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.10:0,90,860	0/0:10,0:10:21.03:0,21,203	0/0:20,0:20:25.68:0,26,376	0/0:23,0:23:53.54:0,54,468	0/0:19,0:19:33.79:0,34,368	0/0:19,0:19:54.06:0,54,509	0/0:19,0:19:41.87:0,42,385	0/0:23,0:23:54.08:0,54,519	0/0:17,0:17:45.07:0,45,433	0/0:21,0:21:54.09:0,54,521	0/0:9,0:9:27.04:0,27,260	0/0:27,0:27:80.92:0,81,745	0/0:20,0:20:54.05:0,54,510	0/0:19,0:19:48.06:0,48,460	0/0:24,0:24:63.09:0,63,608	0/0:18,0:18:45.02:0,45,425	1/1:3,29:31:49.26:877,49,0	0/0:27,0:27:75.05:0,75,706	0/0:13,0:13:30.02:0,30,289	0/0:21,0:21:57.09:0,57,550	0/0:28,0:28:66.07:0,66,630	0/0:19,0:19:45.06:0,45,431	1/1:1,8:8:15.05:181,15,0	1/1:4,20:24:57.17:688,57,0	0/0:31,0:31:87.14:0,87,838	0/0:25,0:25:57.09:0,57,549	0/0:19,0:19:34.15:0,34,456	0/0:10,0:10:27.03:0,27,258
chr10	69964560	.	A	AAT	2304.52	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=-9.326;DP=590;FS=0.000;HRun=0;HaplotypeScore=81.5264;InbreedingCoeff=0.8146;MQ=70.69;MQ0=0;MQRankSum=-0.107;QD=23.52;ReadPosRankSum=2.620;VQSLOD=3.8503;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.16:0,66,853	0/0:16,0:16:14.32:0,14,107	0/0:12,0:11:33.03:0,33,371	0/0:6,0:6:2.32:0,2,36	0/0:39,0:39:99:0,109,1428	0/0:19,0:19:54.12:0,54,672	0/0:16,0:16:45.09:0,45,574	0/1:24,0:24:4.58:5,0,95	0/0:16,0:16:42.11:0,42,526	0/0:23,0:23:69.13:0,69,827	0/0:19,0:19:54.12:0,54,671	0/0:17,0:17:51.16:0,51,691	0/0:20,0:20:54.13:0,54,683	0/0:20,0:20:60.16:0,60,774	0/0:26,0:26:76.07:0,76,965	0/0:21,0:21:62.84:0,63,787	1/1:2,29:31:69.22:1166,69,0	0/0:23,0:23:53.44:0,53,202	0/0:21,0:21:55.79:0,56,602	0/0:32,0:32:96.22:0,96,1207	0/0:17,0:17:45.13:0,45,583	0/0:18,0:18:53.77:0,54,653	1/1:1,27:29:46.32:821,46,0	1/1:0,14:14:26.85:457,27,0	0/0:23,0:23:69.17:0,69,884	0/0:32,0:32:86.02:0,86,1031	0/0:31,0:31:88.44:0,88,1089	./.
chr10	69965994	.	AAGAG	A	2016.06	PASS	AB=0.954;AC=15;AF=0.268;AN=56;BaseQRankSum=6.522;DP=584;FS=4.151;HRun=0;HaplotypeScore=128.9984;InbreedingCoeff=0.0959;MQ=63.08;MQ0=1;MQRankSum=0.303;QD=8.20;ReadPosRankSum=-1.521;VQSLOD=2.6572;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:15.48:0,15,210	0/0:5,0:5:14.98:0,15,147	0/0:15,0:14:25.69:0,26,249	0/1:8,0:6:19.94:20,0,90	0/0:32,0:32:0.67:0,1,421	0/0:24,0:24:49.67:0,50,613	0/0:21,0:21:56.79:0,57,613	1/1:20,0:20:47.75:421,48,0	0/0:19,0:19:33.30:0,33,655	0/1:20,0:20:67.98:68,0,210	0/1:19,0:19:34.73:35,0,235	0/0:28,0:28:80.85:0,81,1073	0/0:26,0:26:65.54:0,66,1008	0/0:31,0:31:78.56:0,79,1179	0/0:32,0:32:0.75:0,1,388	0/0:21,0:21:63.04:0,63,936	0/1:9,22:30:11.30:297,0,11	0/1:17,0:17:65.83:66,0,123	0/0:15,0:14:4.41:0,4,257	0/1:17,0:17:41.47:41,0,243	0/1:13,0:13:11.53:12,0,152	0/0:22,0:22:66.01:0,66,1126	1/1:17,1:18:48.45:514,48,0	1/1:5,21:25:10.22:404,10,0	0/0:30,0:30:70.71:0,71,919	0/1:32,0:32:99:207,0,264	0/1:25,0:25:99:100,0,226	0/0:1,0:1:2.98:0,3,22
chr10	69965998	.	GAGAA	G	2779.17	PASS	AB=0.993;AC=23;AF=0.479;AN=48;BaseQRankSum=6.598;DP=579;FS=3.154;HRun=0;HaplotypeScore=127.4194;InbreedingCoeff=0.4213;MQ=60.27;MQ0=2;MQRankSum=-0.549;QD=8.42;ReadPosRankSum=1.392;VQSLOD=2.2335;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:8.87:12,0,9	0/0:4,0:4:3:0,3,26	./.	./.	0/1:33,0:33:3.16:171,0,3	0/0:23,0:23:24:0,24,244	0/0:22,0:21:15.01:0,15,255	./.	0/1:18,1:19:12.60:13,0,535	1/1:10,12:22:33.03:394,33,0	1/1:14,3:18:12.03:164,12,0	0/0:28,0:28:36.12:0,36,746	0/0:25,0:25:44.72:0,45,809	0/0:33,0:33:9.27:0,9,784	1/1:18,14:32:9.03:137,9,0	0/0:21,0:21:33.11:0,33,669	0/1:28,0:27:19.38:132,0,19	0/1:20,0:20:16.38:190,0,16	0/1:16,0:15:13.76:76,0,14	1/1:19,0:19:13.59:186,14,0	1/1:10,0:10:6.02:91,6,0	0/0:23,0:23:45.14:0,45,820	1/1:18,0:18:11.96:113,12,0	0/1:25,0:24:1.91:199,0,2	0/0:31,0:32:41.94:0,42,437	1/1:31,0:31:51.73:747,52,0	1/1:25,0:25:23.45:329,23,0	./.
chr10	69966044	.	GA	G	484.26	PASS	AB=0.837;AC=6;AF=0.120;AN=50;BaseQRankSum=8.641;DP=577;FS=3.890;HRun=3;HaplotypeScore=107.2427;InbreedingCoeff=0.0618;MQ=50.22;MQ0=34;MQRankSum=-2.124;QD=4.48;ReadPosRankSum=1.180;VQSLOD=0.5191;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:11,2:11:54.18:60,0,54	0/0:7,1:3:6.02:0,6,73	./.	./.	1/1:26,4:26:1.95:313,2,0	0/0:27,0:27:69.18:0,69,873	0/0:18,0:17:48.16:0,48,648	0/0:31,0:28:84.02:0,84,1001	0/0:23,0:21:61.42:0,61,825	0/0:27,0:27:55.02:0,55,706	0/0:13,0:13:17.26:0,17,187	0/0:30,0:30:87.29:0,87,1207	0/0:26,0:26:78.25:0,78,1079	0/0:27,0:27:77.83:0,78,1045	0/0:28,0:28:45.88:0,46,577	0/0:26,0:26:78.26:0,78,1088	0/0:26,0:23:44.18:0,44,412	0/0:17,0:17:9.04:0,9,267	0/1:9,3:9:41.24:61,0,41	0/0:15,2:12:0.47:0,0,96	0/0:7,0:6:10.71:0,11,47	0/0:26,0:26:69.22:0,69,960	0/0:16,0:13:11.23:0,11,62	0/0:32,0:28:11.35:0,11,204	0/0:38,0:38:87.22:0,87,1106	0/1:27,6:27:26.85:96,0,27	0/1:16,4:19:22.43:70,0,22	./.
chr10	69966051	.	A	AG	719.38	PASS	AB=0.858;AC=12;AF=0.231;AN=52;BaseQRankSum=7.516;DP=600;FS=1.754;HRun=1;HaplotypeScore=112.4872;InbreedingCoeff=0.3203;MQ=49.54;MQ0=35;MQRankSum=-4.969;QD=5.00;ReadPosRankSum=-0.864;VQSLOD=0.0043;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,2:12:17.27:146,17,0	0/1:7,1:3:5.94:6,0,16	./.	./.	1/1:21,7:24:8.68:289,9,0	0/0:28,0:28:49.75:0,50,686	0/0:20,0:19:28.91:0,29,615	0/0:34,0:31:86.32:0,86,975	0/0:23,0:21:60.12:0,60,745	0/0:30,0:28:59.85:0,60,796	0/0:15,0:15:25.28:0,25,258	0/0:33,0:33:87.27:0,87,1104	0/0:31,0:31:90.27:0,90,1138	0/0:29,0:29:82.28:0,82,1010	0/0:29,0:29:50.95:0,51,586	0/0:30,0:29:78.25:0,78,1012	0/0:25,0:21:45.12:0,45,451	0/0:16,0:16:36.57:0,37,332	0/1:10,3:9:50.71:96,0,51	0/1:13,2:10:1.89:2,0,69	0/1:6,1:6:13.73:14,0,29	0/0:27,0:27:69.16:0,69,833	0/0:17,0:14:15.02:0,15,154	0/0:27,0:23:31.47:0,31,362	0/0:36,0:36:14.59:0,15,561	0/1:29,6:29:99:143,0,242	0/1:16,4:19:99:130,0,113	1/1:4,0:2:3.01:43,3,0
chr10	69966056	.	AAAGG	A	1334.49	PASS	AB=0.979;AC=8;AF=0.154;AN=52;BaseQRankSum=3.298;DP=608;FS=2.843;HRun=0;HaplotypeScore=143.6372;InbreedingCoeff=0.6454;MQ=49.72;MQ0=36;MQRankSum=-6.503;QD=11.60;ReadPosRankSum=-5.717;VQSLOD=1.0408;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:13:20.88:0,21,170	0/0:8,0:3:2.97:0,3,20	./.	./.	0/0:31,0:27:52.59:0,53,341	0/0:27,0:28:57.18:0,57,1235	0/0:21,0:20:25.78:0,26,813	1/1:13,24:34:72.04:971,72,0	0/0:23,0:21:63.18:0,63,1340	0/0:30,0:28:60.15:0,60,1305	0/0:16,0:16:26.40:0,26,428	0/0:35,0:35:84.26:0,84,1791	0/0:30,0:30:72.23:0,72,1618	0/0:28,0:28:63.15:0,63,1418	0/0:29,0:29:51.16:0,51,1114	0/0:32,0:31:66.18:0,66,1406	0/1:22,1:19:6.20:394,0,6	0/0:16,0:16:28.22:0,28,429	0/1:14,0:9:4.43:4,0,152	0/0:18,0:13:18.33:0,18,133	0/0:7,0:6:8.47:0,8,55	0/0:24,0:24:50.94:0,51,1096	1/1:7,9:13:5.19:27,5,0	1/1:23,2:21:15.50:76,16,0	0/0:35,0:37:56.75:0,57,1137	0/0:31,0:25:52.84:0,53,478	0/0:22,0:21:41.18:0,41,334	0/0:5,0:3:5.95:0,6,42
chr10	69966081	.	AAGG	A	35.22	PASS	AB=0.929;AC=4;AF=0.077;AN=52;BaseQRankSum=5.293;DP=624;FS=0.000;HRun=0;HaplotypeScore=123.6568;InbreedingCoeff=-0.0826;MQ=50.75;MQ0=35;MQRankSum=1.956;QD=0.48;ReadPosRankSum=-5.755;VQSLOD=0.5019;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:14:29.91:0,30,562	0/0:11,0:6:9.51:0,10,43	./.	./.	0/0:33,0:29:48.17:0,48,384	0/0:28,0:28:68.44:0,68,1355	0/0:20,0:20:60.04:0,60,1098	0/0:34,0:33:91.55:0,92,1212	0/0:21,0:20:60.21:0,60,1249	0/0:26,1:25:62.61:0,63,1271	0/0:21,0:21:31.21:0,31,456	0/0:36,0:36:86.47:0,86,1414	0/0:29,0:29:87.28:0,87,1760	0/0:26,0:26:73.93:0,74,1475	0/0:34,0:34:78.08:0,78,1615	0/0:28,2:29:18.55:0,19,1198	0/0:23,1:20:56.94:0,57,830	0/1:13,6:19:12.36:12,0,355	0/0:17,1:12:28.12:0,28,412	0/0:17,0:12:26.69:0,27,401	0/1:9,0:8:54.35:54,0,253	0/0:21,0:21:57.09:0,57,1232	0/1:24,0:20:62.89:63,0,222	0/1:21,1:18:8.32:8,0,122	0/0:33,0:33:48.15:0,48,941	0/0:32,0:26:62.39:0,62,1051	0/0:26,0:25:67.41:0,67,1164	0/0:7,0:6:15.05:0,15,353
chr10	69966084	.	GAAGA	G	702.56	PASS	AB=0.971;AC=7;AF=0.140;AN=50;BaseQRankSum=3.215;DP=647;FS=0.751;HRun=0;HaplotypeScore=133.4470;InbreedingCoeff=0.7322;MQ=51.17;MQ0=35;MQRankSum=1.156;QD=6.06;ReadPosRankSum=-0.099;VQSLOD=2.5905;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:17:30.10:0,30,615	1/1:12,0:7:11.88:78,12,0	./.	./.	1/1:17,16:29:41.97:484,42,0	0/0:28,0:29:5.16:0,5,554	0/0:20,0:20:21.07:0,21,393	./.	0/0:21,0:20:18.06:0,18,411	0/0:30,0:28:30:0,30,403	0/0:13,0:23:35.95:0,36,388	1/1:24,13:37:18.06:273,18,0	0/0:28,0:28:36.12:0,36,794	0/0:25,0:25:24.08:0,24,530	0/1:33,1:34:0.38:0,0,868	0/0:30,0:29:30.06:0,30,406	0/0:26,0:22:40.69:0,41,633	0/0:19,0:19:27.02:0,27,268	0/0:21,0:15:5.98:0,6,90	0/0:17,0:12:17.98:0,18,343	0/0:9,0:8:14.45:0,14,231	0/0:23,0:23:33.09:0,33,665	0/0:25,0:21:32.66:0,33,491	0/0:23,0:19:42:0,42,644	0/0:22,0:33:15.01:0,15,199	0/0:33,1:28:2.64:0,3,839	0/0:26,1:26:5.90:0,6,919	0/0:8,0:7:18.04:0,18,359
chr10	69967584	.	TCACCC	T	4134.24	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=5.805;DP=453;FS=7.977;HRun=0;HaplotypeScore=128.0086;InbreedingCoeff=0.8066;MQ=65.51;MQ0=0;MQRankSum=-7.992;QD=23.49;ReadPosRankSum=5.821;VQSLOD=2.6834;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:56.57:572,0,57	0/0:9,0:9:24.07:0,24,302	0/0:10,0:9:27.08:0,27,627	0/0:14,0:13:39.11:0,39,836	1/1:18,1:19:45.13:548,45,0	0/0:13,0:13:29.68:0,30,677	0/0:18,0:18:51.07:0,51,966	0/0:18,0:18:50.32:0,50,425	0/0:14,0:14:42.13:0,42,1077	0/0:8,0:9:23.66:0,24,367	0/0:10,0:10:24.04:0,24,463	0/0:15,0:15:39.09:0,39,837	0/0:11,0:11:33.08:0,33,787	0/0:13,0:13:39.13:0,39,1015	0/0:9,0:12:27.08:0,27,644	0/0:13,0:15:45.14:0,45,1032	0/0:14,0:14:37.91:0,38,223	0/0:13,0:13:36.12:0,36,627	0/1:27,0:27:86.90:444,0,87	1/1:22,2:24:45.17:694,45,0	1/1:18,1:19:30.06:318,30,0	0/0:16,0:16:40.31:0,40,831	0/0:15,0:17:39.74:0,40,213	0/0:23,0:23:61.95:0,62,394	0/0:13,0:13:39.13:0,39,891	1/1:26,0:26:62.80:693,63,0	1/1:24,1:25:24.21:637,24,0	1/1:8,0:8:21.05:229,21,0
chr10	69967586	.	ACCCCC	A	6969.93	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-2.424;DP=444;FS=9.126;HRun=11;HaplotypeScore=116.5873;InbreedingCoeff=0.9941;MQ=64.48;MQ0=0;MQRankSum=-5.834;QD=40.06;ReadPosRankSum=3.560;VQSLOD=2.8789;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:28:54.17:974,54,0	0/0:1,0:9:24.05:0,24,247	0/0:9,0:9:24.08:0,24,590	0/0:13,0:12:33.11:0,33,700	1/1:2,17:19:45.15:806,45,0	0/0:12,0:13:29.69:0,30,670	0/0:16,0:17:36.09:0,36,874	0/0:7,0:16:27.99:0,28,165	0/0:13,0:13:39.13:0,39,1016	0/0:10,0:11:14.91:0,15,336	0/0:5,0:8:21.06:0,21,416	0/0:12,0:14:30.10:0,30,763	0/0:10,0:11:27.09:0,27,693	0/0:12,0:13:39.13:0,39,1028	0/0:8,0:11:24.08:0,24,619	0/0:13,0:16:45.15:0,45,1031	0/0:0,0:13:32.42:0,32,143	0/0:6,0:14:36.10:0,36,570	1/1:6,20:26:60.01:954,60,0	1/1:2,22:24:60.19:1085,60,0	1/1:1,17:18:30.09:538,30,0	0/0:18,0:18:41.50:0,41,912	0/0:2,0:16:34.05:0,34,145	0/0:5,0:21:43.44:0,43,184	0/0:11,0:13:39.10:0,39,798	1/1:0,26:26:75.10:1198,75,0	1/1:3,22:25:57.18:1033,57,0	1/1:0,8:8:21.07:382,21,0
chr10	69969545	.	ACACACACAC	A	195.14	PASS	AB=0.783;AC=3;AF=0.054;AN=56;BaseQRankSum=7.689;DP=708;FS=1.097;HRun=0;HaplotypeScore=286.8256;InbreedingCoeff=-0.0653;MQ=48.94;MQ0=28;MQRankSum=-7.148;QD=3.55;ReadPosRankSum=-5.472;VQSLOD=1.2482;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:25.41:0,25,446	0/0:9,0:9:20.74:0,21,432	0/0:21,0:10:26.71:0,27,159	0/0:35,0:24:54.80:0,55,325	0/0:31,0:28:10.08:0,10,57	0/0:21,0:19:43.84:0,44,745	0/0:25,0:23:34.06:0,34,741	0/0:32,0:28:71.08:0,71,793	0/0:30,0:29:55.02:0,55,1771	0/0:27,0:25:71.18:0,71,1872	0/0:14,0:14:18.85:0,19,578	0/0:29,0:30:65.52:0,66,2086	0/0:30,0:29:74.24:0,74,1866	0/0:25,0:24:46.52:0,47,1767	0/0:34,0:32:65.92:0,66,2158	0/0:35,0:35:80.10:0,80,2073	0/1:9,4:13:80.78:159,0,81	0/0:15,0:15:38.78:0,39,686	0/0:24,0:23:68.09:0,68,1202	0/0:24,0:23:3.98:0,4,27	0/0:26,0:25:20.85:0,21,235	0/0:20,0:19:35.05:0,35,1266	0/1:14,5:18:32.83:33,0,138	0/1:17,4:23:70.81:103,0,71	0/0:25,0:24:61.57:0,62,1955	0/0:36,0:35:75:0,75,1893	0/0:29,0:29:50.38:0,50,1176	0/0:15,0:12:12:0,12,298
chr10	69969553	.	A	ATACACACG	6071.53	PASS	AB=0.948;AC=29;AF=0.518;AN=56;BaseQRankSum=-13.271;DP=682;FS=25.777;HRun=0;HaplotypeScore=245.9733;InbreedingCoeff=-0.6941;MQ=46.21;MQ0=31;MQRankSum=-0.359;QD=9.67;ReadPosRankSum=-8.315;VQSLOD=0.4853;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,18:37:33.73:34,0,132	0/1:12,0:10:49.25:121,0,49	1/1:19,0:8:9.02:100,9,0	0/1:25,0:15:15.99:352,0,16	0/0:7,16:28:5.91:0,6,38	0/1:16,0:14:18.01:180,0,18	0/1:24,0:22:96.23:150,0,96	0/1:35,0:31:99:222,0,357	0/1:27,0:26:99:139,0,325	0/1:26,0:23:99:153,0,427	0/1:13,0:13:74.92:115,0,75	0/1:28,0:27:99:145,0,489	0/1:27,0:26:99:125,0,487	0/1:26,0:24:76.02:76,0,427	0/1:34,0:31:93.19:93,0,380	0/1:33,0:33:99:179,0,386	0/1:11,0:11:37.03:43,0,37	0/1:16,0:15:99:181,0,114	1/1:4,14:24:14.14:987,14,0	0/0:2,18:22:0:0,0,0	0/1:25,0:23:46.65:141,0,47	0/1:21,0:20:35.68:36,0,310	0/1:15,0:14:19.18:163,0,19	0/1:22,0:22:45.49:59,0,45	0/1:23,0:22:99:217,0,183	0/1:9,27:39:77.23:1138,0,77	1/1:29,0:30:47.50:733,47,0	0/1:7,9:13:12.08:189,0,12
chr10	69969574	.	C	CAGAGAG	2071.52	PASS	AB=1.000;AC=23;AF=0.442;AN=52;BaseQRankSum=-2.710;DP=528;FS=37.257;HRun=0;HaplotypeScore=212.2506;InbreedingCoeff=-0.2589;MQ=42.27;MQ0=27;MQRankSum=2.086;QD=5.22;ReadPosRankSum=-2.312;VQSLOD=1.1993;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:29:1.33:245,1,0	1/1:10,0:8:4.71:46,5,0	./.	./.	1/1:22,0:19:12.04:289,12,0	0/1:8,0:6:8.51:9,0,102	0/1:18,0:16:31.02:31,0,197	0/1:28,0:25:97.19:97,0,252	0/1:26,0:25:67.82:68,0,439	0/0:24,0:21:56.49:0,56,651	0/0:9,0:9:11.92:0,12,157	0/1:21,0:20:25.52:26,0,605	0/1:22,0:20:99:109,0,422	0/1:25,0:23:56.59:57,0,508	0/0:31,1:32:53.49:0,53,733	0/1:25,0:25:91.97:92,0,652	0/1:9,0:9:11.46:68,0,11	0/1:13,0:12:8.69:41,0,9	0/1:20,0:18:71:71,0,162	1/1:22,0:21:18.01:345,18,0	0/1:24,0:22:13.79:69,0,14	0/0:20,0:19:10.37:0,10,401	0/0:10,0:9:2.15:0,2,16	0/0:15,0:15:1.41:0,1,3	0/0:18,0:17:45.43:0,45,466	0/1:30,0:27:99:453,0,140	0/1:31,0:31:71.07:71,0,80	0/1:13,0:10:42.49:42,0,75
chr10	69969576	.	C	CAGAGAGAG	5444.84	PASS	AB=0.991;AC=46;AF=0.885;AN=52;BaseQRankSum=-2.812;DP=635;FS=5.811;HRun=0;HaplotypeScore=264.0859;InbreedingCoeff=-0.0987;MQ=40.46;MQ0=26;MQRankSum=-0.345;QD=8.60;ReadPosRankSum=-1.228;VQSLOD=3.0379;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,1:30:23.27:424,23,0	1/1:11,0:9:5.93:40,6,0	./.	./.	1/1:23,0:20:11.91:385,12,0	1/1:13,0:11:5.09:28,5,0	1/1:23,0:19:2.76:74,3,0	1/1:42,0:36:23.41:397,23,0	0/1:27,0:26:6.50:216,0,6	1/1:31,0:28:21.07:508,21,0	0/1:12,0:12:0:0,0,0	0/1:26,0:26:19.02:79,0,19	1/1:28,0:26:26.99:450,27,0	1/1:29,0:26:8.35:165,8,0	0/1:45,0:42:10.59:11,0,81	0/1:34,0:33:43.05:364,0,43	1/1:9,2:12:6.02:110,6,0	1/1:16,0:15:3.21:121,3,0	1/1:21,1:20:14.27:226,14,0	1/1:26,0:25:21.07:526,21,0	1/1:25,0:23:6.02:138,6,0	0/1:25,0:24:8.29:71,0,8	1/1:14,0:13:3.47:26,3,0	1/1:19,0:18:1.13:21,1,0	1/1:20,0:18:6:51,6,0	1/1:33,0:30:35.18:807,35,0	1/1:22,0:31:2.72:109,3,0	1/1:13,0:10:6.84:100,7,0
chr10	69972010	.	AG	A	8649.30	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.272;DP=761;FS=3.355;HRun=2;HaplotypeScore=90.4758;InbreedingCoeff=0.9993;MQ=76.21;MQ0=1;MQRankSum=-0.895;QD=38.79;ReadPosRankSum=0.934;VQSLOD=5.1316;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:44:99:1594,114,0	0/0:20,0:20:60.20:0,60,949	0/0:27,0:21:48.03:0,48,788	0/0:41,0:35:83.84:0,84,1163	1/1:0,35:35:99:1405,102,0	0/0:31,0:30:93.32:0,93,1469	0/0:16,0:16:48.16:0,48,767	0/0:34,0:34:96.31:0,96,1493	0/0:34,0:34:99:0,102,1613	0/0:30,0:30:90.30:0,90,1419	0/0:18,0:18:51.17:0,51,815	0/0:26,0:26:78.25:0,78,1224	0/0:21,0:21:63.21:0,63,1003	0/0:25,0:25:75.26:0,75,1199	0/0:30,0:30:90.29:0,90,1404	0/0:31,0:31:93.32:0,93,1487	0/0:25,0:25:75.26:0,75,1199	0/0:21,0:21:63.17:0,63,979	1/1:0,27:27:81.20:1060,81,0	1/1:0,29:29:78.22:1069,78,0	1/1:0,24:24:60.20:839,60,0	0/0:27,0:27:81.28:0,81,1295	0/0:28,0:28:84.29:0,84,1342	0/0:32,0:32:93.32:0,93,1487	0/0:21,0:21:63.20:0,63,984	1/1:0,34:34:99:1426,102,0	1/1:0,23:23:69.23:962,69,0	1/1:0,7:7:21.07:294,21,0
chr10	69976064	.	TA	T	4486.65	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.815;DP=585;FS=2.998;HRun=8;HaplotypeScore=56.4381;InbreedingCoeff=0.9916;MQ=72.36;MQ0=0;MQRankSum=-0.986;QD=24.93;ReadPosRankSum=0.507;VQSLOD=5.5773;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:87.14:840,87,0	0/0:12,0:12:30.09:0,30,362	0/0:12,0:12:27.06:0,27,295	0/0:9,0:9:15:0,15,155	1/1:3,27:30:75.11:724,75,0	0/0:26,0:26:75.21:0,75,894	0/0:16,0:16:42.03:0,42,474	0/0:37,0:37:99:0,99,1167	0/0:23,0:23:63.15:0,63,727	0/0:24,0:24:69.20:0,69,817	0/0:18,0:18:51.16:0,51,616	0/0:17,0:17:48.13:0,48,567	0/0:20,0:20:60.16:0,60,699	0/0:20,0:20:60.17:0,60,715	0/0:27,0:27:81.22:0,81,964	0/0:10,0:10:27.08:0,27,326	0/0:32,0:32:84.22:0,84,999	0/0:23,0:23:69.14:0,69,803	1/1:3,23:26:69.04:647,69,0	1/1:0,27:27:75.11:724,75,0	1/1:0,14:14:42.07:405,42,0	0/0:16,0:16:39.12:0,39,471	0/0:21,0:21:48.15:0,48,579	0/0:14,0:14:42.13:0,42,507	0/0:28,0:28:81.24:0,81,970	1/1:5,22:27:32.86:596,33,0	1/1:2,17:19:45.07:434,45,0	1/1:1,4:5:12.02:116,12,0
chr10	69976357	.	T	TTATCTATTTATC	6095.37	PASS	AB=0.903;AC=20;AF=0.357;AN=56;BaseQRankSum=8.025;DP=719;FS=7.368;HRun=0;HaplotypeScore=226.3121;InbreedingCoeff=0.6585;MQ=60.09;MQ0=3;MQRankSum=-4.821;QD=21.31;ReadPosRankSum=-2.640;VQSLOD=2.6312;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:18:19.20:451,19,0	0/1:13,0:13:49.71:195,0,50	0/0:16,0:7:7.95:0,8,97	0/0:17,0:13:27.04:0,27,295	1/1:34,0:34:81.06:1197,81,0	0/0:21,0:21:57.07:0,57,1319	0/0:23,0:23:54.09:0,54,1011	0/1:44,0:44:10.23:10,0,724	0/0:41,0:41:99:0,117,2525	0/0:29,0:29:75.09:0,75,1856	0/0:21,0:21:63.13:0,63,1271	0/0:35,0:35:96.15:0,96,2109	0/0:45,0:45:99:0,126,2963	0/0:29,0:29:78.19:0,78,2112	0/0:31,0:31:93.24:0,93,2391	0/0:30,0:30:87.12:0,87,1961	0/1:7,0:19:37.06:37,0,79	0/1:9,0:9:29.50:30,0,91	1/1:4,10:17:46.53:886,47,0	1/1:6,18:27:25.29:370,25,0	1/1:18,0:18:23.82:179,24,0	0/0:20,0:20:54.09:0,54,1027	0/0:12,0:27:34.62:0,35,333	0/0:10,0:25:11.91:0,12,100	0/0:23,0:23:66.13:0,66,1599	1/1:35,0:35:88.74:1951,89,0	1/1:6,24:36:15.05:434,15,0	1/1:3,7:11:5.66:357,6,0
chr10	69978354	.	TG	T	1551.42	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.888;DP=765;FS=14.993;HRun=3;HaplotypeScore=68.7259;InbreedingCoeff=1.0000;MQ=59.79;MQ0=3;MQRankSum=-0.553;QD=31.03;ReadPosRankSum=0.284;VQSLOD=2.1187;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.20:0,84,1182	1/1:0,16:16:48.15:595,48,0	0/0:33,0:31:78.53:0,79,1143	0/0:26,0:24:69.14:0,69,937	0/0:43,0:43:99:0,126,1809	0/0:33,0:33:93.30:0,93,1322	0/0:29,0:29:84.28:0,84,1202	0/0:38,0:38:99:0,105,1479	0/0:23,0:23:66.22:0,66,950	0/0:26,0:26:72.23:0,72,1017	0/0:23,0:23:63.20:0,63,890	0/0:23,0:23:69.23:0,69,993	0/0:36,0:36:99:0,105,1512	0/0:15,0:15:45.15:0,45,648	0/0:22,0:22:66.22:0,66,951	0/0:30,0:30:90.30:0,90,1296	0/0:25,0:24:69.23:0,69,993	1/1:0,34:34:87.27:1078,87,0	0/0:23,0:21:57.18:0,57,800	0/0:29,0:29:84.28:0,84,1205	0/0:31,0:31:93.31:0,93,1339	0/0:27,0:26:75.24:0,75,1061	0/0:26,0:26:72.20:0,72,997	0/0:17,0:17:51.17:0,51,734	0/0:19,0:19:57.17:0,57,788	0/0:35,0:35:99:0,105,1511	0/0:39,0:39:99:0,111,1580	0/0:13,0:13:39.13:0,39,561
chr10	69978894	.	C	CTCTGACCTGGTCAG	2087.47	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.888;DP=660;FS=3.790;HRun=0;HaplotypeScore=253.1724;InbreedingCoeff=0.9905;MQ=87.61;MQ0=0;MQRankSum=-6.150;QD=115.97;ReadPosRankSum=-0.899;VQSLOD=2.8386;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:92.88:0,93,3506	1/1:5,4:10:23.42:1256,23,0	0/0:27,0:27:65.79:0,66,1790	0/0:21,0:21:59.43:0,59,1867	0/0:20,0:20:57.18:0,57,2281	0/0:21,0:21:60.21:0,60,2443	0/0:22,0:22:60.17:0,60,2057	0/0:34,0:34:90.29:0,90,3300	0/0:23,0:23:66.23:0,66,2769	0/0:24,0:24:63.21:0,63,2466	0/0:20,0:20:60.21:0,60,2517	0/0:19,0:19:54.19:0,54,2213	0/0:23,0:23:63.22:0,63,2364	0/0:27,0:27:75.26:0,75,2918	0/0:40,0:40:99:0,120,4514	0/0:29,0:29:84.29:0,84,3135	0/0:21,0:21:63.22:0,63,2416	1/1:2,3:8:15.05:949,15,0	0/0:19,0:19:57.18:0,57,2060	0/0:29,0:29:84.29:0,84,3163	0/0:31,0:31:84.26:0,84,3349	0/0:23,0:23:69.20:0,69,2511	0/0:27,0:27:78.25:0,78,3090	0/0:23,0:23:66.23:0,66,2715	0/0:21,0:21:57.17:0,57,2178	0/0:29,0:29:81.28:0,81,3325	0/0:22,0:22:66.23:0,66,2580	0/0:15,0:15:45.15:0,45,1888
chr10	69980560	.	G	GA	1453.36	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.672;DP=703;FS=3.113;HRun=7;HaplotypeScore=91.8255;InbreedingCoeff=0.9106;MQ=76.05;MQ0=18;MQRankSum=1.125;QD=22.36;ReadPosRankSum=0.318;VQSLOD=3.4123;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:50.95:0,51,469	0/0:15,0:15:45.01:0,45,417	0/0:90,1:33:44.41:0,44,395	0/0:83,0:25:1.97:0,2,173	0/0:29,0:29:75.63:0,76,652	0/0:22,0:22:59.92:0,60,552	0/0:11,0:11:29.78:0,30,272	0/0:30,0:30:74.04:0,74,686	0/0:7,0:7:20.95:0,21,183	0/0:20,0:19:42.91:0,43,455	0/0:20,0:20:44.26:0,44,403	0/0:25,0:25:54.04:0,54,503	0/0:21,0:21:51.06:0,51,481	0/0:12,0:12:30.05:0,30,288	0/0:24,0:24:66.01:0,66,612	0/0:28,0:28:66.03:0,66,609	1/1:16,1:17:39.50:413,39,0	0/0:16,0:16:30.01:0,30,281	0/0:27,0:27:64.24:0,64,530	0/0:25,0:25:53.43:0,53,460	0/0:15,0:15:26.68:0,27,231	0/0:14,0:14:41.26:0,41,372	1/1:27,2:29:73.27:711,73,0	1/1:18,1:19:47.19:471,47,0	0/0:19,0:19:41.79:0,42,367	0/0:26,0:26:61.31:0,61,530	0/0:34,0:34:65.87:0,66,498	0/0:4,0:4:8.97:0,9,70
chr10	69980569	.	G	GT	1239.46	PASS	AB=0.837;AC=14;AF=0.250;AN=56;BaseQRankSum=-5.619;DP=699;FS=12.387;HRun=15;HaplotypeScore=92.4167;InbreedingCoeff=0.3926;MQ=75.17;MQ0=24;MQRankSum=-0.391;QD=6.20;ReadPosRankSum=-2.225;VQSLOD=0.8205;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:26.21:0,26,161	0/0:15,0:15:20.13:0,20,166	0/0:94,0:29:11.37:0,11,71	0/0:91,0:28:4.97:0,5,54	0/1:22,3:30:15:15,0,220	0/0:19,0:20:42.99:0,43,257	0/0:12,0:12:14.47:0,14,88	0/0:27,0:30:24:0,24,136	0/1:6,0:6:8.45:8,0,42	0/0:20,2:21:1.06:0,1,117	0/0:18,1:19:13.60:0,14,161	0/0:10,0:21:11.73:0,12,37	0/0:10,0:21:5.88:0,6,30	0/0:8,0:14:7.88:0,8,27	0/0:23,0:25:16.42:0,16,160	0/1:22,0:24:11.65:12,0,106	0/0:19,0:19:30.28:0,30,128	0/0:13,0:13:20.07:0,20,138	1/1:17,6:26:29.33:335,29,0	1/1:17,8:25:22.08:270,22,0	0/1:5,3:10:3.29:64,0,3	0/0:3,0:13:18.27:0,18,52	0/0:24,0:27:43.11:0,43,190	0/0:16,0:18:27.31:0,27,111	0/1:8,3:14:46.69:52,0,47	1/1:9,16:25:41.91:345,42,0	1/1:14,20:35:5.88:256,6,0	0/1:2,2:5:6.18:52,0,6
chr10	69981198	.	GA	G	2714.66	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.479;DP=664;FS=3.128;HRun=5;HaplotypeScore=61.7729;InbreedingCoeff=0.9994;MQ=89.09;MQ0=0;MQRankSum=-2.462;QD=27.70;ReadPosRankSum=2.465;VQSLOD=4.1109;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.28:0,87,1172	1/1:0,8:8:24.07:272,24,0	0/0:26,0:26:72.19:0,72,958	0/0:22,0:22:57.16:0,57,742	0/0:27,0:27:75.22:0,75,992	0/0:25,0:25:72.24:0,72,984	0/0:35,0:35:99:0,105,1404	0/0:20,0:20:54.18:0,54,738	0/0:12,0:12:33.11:0,33,451	0/0:30,0:30:87.28:0,87,1164	0/0:25,0:25:72.23:0,72,968	0/0:21,0:21:60.19:0,60,796	0/0:29,0:29:84.28:0,84,1147	0/0:15,0:15:45.15:0,45,615	0/0:24,0:24:72.23:0,72,968	0/0:22,0:22:60.20:0,60,821	1/1:2,29:31:78.22:884,78,0	1/1:1,15:16:42.12:476,42,0	0/0:21,0:21:63.19:0,63,831	0/0:30,0:30:78.26:0,78,1064	0/0:28,0:28:78.26:0,78,1066	0/0:22,0:22:60.20:0,60,820	1/1:2,19:21:50.66:578,51,0	1/1:1,21:22:60.17:680,60,0	0/0:33,0:33:99:0,99,1294	0/0:24,0:24:69.22:0,69,931	0/0:31,0:31:93.31:0,93,1268	0/0:13,0:13:39.12:0,39,513
chr10	69981795	.	C	CT	403.76	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.546;DP=727;FS=0.000;HRun=2;HaplotypeScore=68.2300;InbreedingCoeff=0.9664;MQ=82.40;MQ0=0;MQRankSum=-2.470;QD=28.84;ReadPosRankSum=0.780;VQSLOD=3.1622;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1226	1/1:1,3:4:9.03:129,9,0	0/0:23,0:22:52.94:0,53,608	0/0:18,0:18:48.09:0,48,548	0/0:34,0:34:96.26:0,96,1161	0/0:29,0:28:87.27:0,87,1077	0/0:19,0:19:51.15:0,51,620	0/0:44,0:44:99:0,120,1477	0/0:28,0:28:81.21:0,81,966	0/0:24,0:24:66.19:0,66,798	0/0:26,0:26:75.24:0,75,929	0/0:26,0:26:78.25:0,78,967	0/0:37,0:37:99:0,108,1324	0/0:38,0:38:99:0,114,1388	0/0:39,0:39:99:0,117,1425	0/0:29,0:29:87.26:0,87,1066	0/0:24,0:24:72.17:0,72,850	1/1:0,10:10:27.09:389,27,0	0/0:10,0:10:30.08:0,30,359	0/0:32,0:32:93.29:0,93,1153	0/0:36,0:36:99:0,102,1248	0/0:24,0:24:69.20:0,69,834	0/0:15,0:15:42.13:0,42,521	0/0:17,0:17:48.15:0,48,595	0/0:32,0:32:84.25:0,84,1019	0/0:39,0:39:99:0,111,1363	0/0:30,0:30:87.26:0,87,1065	0/0:7,0:7:21.07:0,21,260
chr10	69983577	.	A	AACAC	2142.42	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=4.083;DP=434;FS=1.317;HRun=0;HaplotypeScore=90.2718;InbreedingCoeff=0.6536;MQ=60.01;MQ0=7;MQRankSum=-1.803;QD=9.69;ReadPosRankSum=0.112;VQSLOD=2.0793;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:99:128,0,99	1/1:9,0:9:6:64,6,0	0/0:23,0:11:3:0,3,26	0/0:19,0:14:5.67:0,6,95	1/1:13,0:12:4.72:26,5,0	0/0:11,0:11:9.03:0,9,144	0/0:13,0:13:15.05:0,15,237	0/0:22,0:22:21.98:0,22,289	0/0:10,0:11:18.04:0,18,244	0/0:15,0:15:24.03:0,24,336	0/0:13,0:13:18.53:0,19,284	0/1:12,0:12:8.93:9,0,155	0/0:9,0:9:18.05:0,18,266	0/0:14,0:14:18.46:0,18,236	0/0:14,0:14:24.08:0,24,383	0/0:17,0:17:23.98:0,24,360	1/1:16,0:15:9.81:65,10,0	1/1:10,0:11:20.92:309,21,0	0/1:13,0:12:9.90:250,0,10	1/1:13,1:15:14.97:134,15,0	1/1:25,1:23:9.03:199,9,0	0/0:14,0:14:12.03:0,12,172	1/1:13,0:13:6.01:73,6,0	1/1:20,0:21:10.92:146,11,0	0/0:18,0:18:12.01:0,12,149	1/1:19,1:20:18.06:380,18,0	1/1:11,4:15:20.87:420,21,0	1/1:6,0:8:9:144,9,0
chr10	69983610	.	AG	A	1011.55	PASS	AB=0.909;AC=17;AF=0.304;AN=56;BaseQRankSum=4.707;DP=394;FS=10.161;HRun=9;HaplotypeScore=65.5396;InbreedingCoeff=0.8254;MQ=58.73;MQ0=10;MQRankSum=2.886;QD=7.12;ReadPosRankSum=2.043;VQSLOD=0.5623;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,12:28:12.99:270,13,0	0/0:5,0:5:8.23:0,8,38	0/0:19,0:14:39.06:0,39,426	0/0:17,0:13:27.08:0,27,306	1/1:8,9:16:35.88:301,36,0	0/1:9,1:8:6.39:6,0,177	0/0:17,0:16:36.05:0,36,369	0/0:20,0:20:36.08:0,36,390	0/0:12,0:12:30.07:0,30,333	0/0:15,0:15:26.67:0,27,303	0/0:11,0:11:21.02:0,21,219	0/0:7,0:7:12.04:0,12,138	0/0:12,0:12:27.06:0,27,293	0/0:13,0:13:33.03:0,33,346	0/0:13,0:13:30.03:0,30,314	0/0:15,0:15:39.11:0,39,441	0/0:15,0:13:18.67:0,19,76	0/0:12,0:13:29.48:0,29,122	1/1:16,0:15:14.97:117,15,0	1/1:11,0:12:3.70:32,4,0	1/1:12,12:21:14.93:121,15,0	0/0:11,0:11:18.04:0,18,199	0/0:7,0:6:2.68:0,3,11	0/0:13,0:13:11.29:0,11,52	0/0:17,0:16:33.05:0,33,345	1/1:8,9:15:26.99:247,27,0	1/1:10,0:10:10.19:30,10,0	1/1:2,4:6:9:81,9,0
chr10	69983611	.	G	GA	1509.77	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=5.779;DP=384;FS=0.000;HRun=1;HaplotypeScore=67.2733;InbreedingCoeff=0.8082;MQ=58.94;MQ0=10;MQRankSum=-1.370;QD=9.93;ReadPosRankSum=2.042;VQSLOD=1.3619;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:23:11.90:188,12,0	0/0:5,0:5:3.62:0,4,20	0/0:20,0:14:39.08:0,39,478	0/0:17,0:13:33.07:0,33,398	1/1:16,4:19:22.94:215,23,0	0/0:10,0:8:23.91:0,24,271	0/0:17,0:16:42.05:0,42,462	0/0:19,0:19:42.10:0,42,514	0/0:12,0:12:32.98:0,33,415	0/0:14,0:14:35.69:0,36,424	0/0:11,0:11:27.04:0,27,289	0/0:7,0:7:15.04:0,15,193	0/0:12,0:12:30.06:0,30,352	0/0:13,0:13:36.03:0,36,410	0/0:13,0:13:39.04:0,39,439	0/0:14,0:14:42.12:0,42,546	0/0:15,0:13:4.08:0,4,23	0/1:12,0:12:0.11:26,0,0	1/1:2,14:15:41.24:499,41,0	1/1:4,8:12:14.99:172,15,0	1/1:23,1:21:19.48:180,19,0	0/0:11,0:11:26.99:0,27,296	0/0:6,0:5:2.50:0,2,9	0/1:12,0:12:3.72:4,0,21	0/0:16,0:15:33.07:0,33,388	1/1:15,1:14:20.63:98,21,0	1/1:0,10:10:20.83:277,21,0	1/1:6,0:6:8.34:47,8,0
chr10	69983617	.	G	GA	975.03	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=0.527;DP=374;FS=0.752;HRun=0;HaplotypeScore=56.9173;InbreedingCoeff=0.8679;MQ=62.89;MQ0=8;MQRankSum=-4.430;QD=19.90;ReadPosRankSum=3.595;VQSLOD=5.5343;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:48.41:0,48,293	1/1:1,5:6:8.96:103,9,0	0/0:23,0:18:45.02:0,45,550	0/0:17,0:13:33.09:0,33,416	0/0:20,0:19:51.34:0,51,315	0/0:10,0:8:23.17:0,23,255	0/0:16,0:15:42.03:0,42,465	0/0:21,0:21:60.09:0,60,681	0/0:11,0:11:33:0,33,403	0/0:10,0:10:26.68:0,27,360	0/0:9,0:9:21.05:0,21,261	0/0:7,0:7:21.04:0,21,244	0/0:10,0:10:26.99:0,27,335	0/0:15,0:15:42.05:0,42,484	0/0:11,0:11:33.03:0,33,390	0/0:15,0:15:42.12:0,42,555	1/1:1,12:12:24.05:320,24,0	1/1:1,10:11:33.11:458,33,0	0/0:13,0:13:32.16:0,32,166	0/0:12,0:12:8:0,8,122	0/0:24,0:21:20.51:0,21,122	0/0:10,0:10:26.98:0,27,302	1/1:1,5:5:3.90:45,4,0	1/1:1,11:13:17.72:211,18,0	0/0:15,0:14:38.82:0,39,436	0/0:17,0:15:38.28:0,38,249	0/0:11,0:11:2.17:0,2,35	0/0:5,0:5:8.22:0,8,42
chr10	69983864	.	ACTGATAC	A	1388.08	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.953;DP=775;FS=6.121;HRun=0;HaplotypeScore=173.1723;InbreedingCoeff=0.9692;MQ=89.45;MQ0=0;MQRankSum=-7.329;QD=46.27;ReadPosRankSum=2.084;VQSLOD=3.1209;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,160,6105	1/1:2,7:9:9.03:237,9,0	0/0:28,0:28:81.28:0,81,2923	0/0:32,0:32:93.22:0,93,3212	0/0:27,0:27:72.25:0,72,2759	0/0:22,0:22:66.20:0,66,2455	0/0:35,0:35:96.29:0,96,3538	0/0:44,0:43:99:0,132,4991	0/0:22,0:22:63.20:0,63,2386	0/0:22,0:22:66.23:0,66,2662	0/0:15,0:15:39.13:0,39,1568	0/0:19,0:19:57.18:0,57,2175	0/0:27,0:27:81.28:0,81,3144	0/0:34,0:34:99:0,99,3878	0/0:35,0:35:99:0,102,3938	0/0:39,0:39:99:0,114,4424	0/0:25,0:25:72.25:0,72,2859	1/1:0,21:21:48.16:1265,48,0	0/0:34,0:34:93.31:0,93,3355	0/0:24,0:24:66.23:0,66,2665	0/0:33,0:33:96.31:0,96,3664	0/0:29,0:29:81.26:0,81,3112	0/0:20,0:20:57.15:0,57,2137	0/0:30,0:30:87.30:0,87,3353	0/0:29,0:29:87.30:0,87,3469	0/0:20,0:20:60.21:0,60,2323	0/0:31,0:31:90.31:0,90,3519	0/0:13,0:13:39.13:0,39,1497
chr10	69985164	.	CCTCTCTCT	C	312.35	PASS	AB=0.911;AC=7;AF=0.130;AN=54;BaseQRankSum=3.443;DP=640;FS=14.922;HRun=0;HaplotypeScore=151.5101;InbreedingCoeff=0.3266;MQ=68.41;MQ0=41;MQRankSum=-4.366;QD=2.74;ReadPosRankSum=1.500;VQSLOD=2.1921;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:18:0,18,377	1/1:8,2:10:2.14:73,2,0	./.	0/1:61,0:19:0:0,0,0	0/0:29,0:28:12.02:0,12,229	0/0:25,0:24:8.79:0,9,216	0/0:25,0:25:16.30:0,16,440	0/0:33,0:32:15.93:0,16,259	0/0:13,0:12:18.06:0,18,515	0/0:21,0:21:16.58:0,17,298	0/0:19,0:19:6.02:0,6,94	0/0:24,0:25:25.21:0,25,616	0/0:20,0:20:23.92:0,24,454	0/0:14,0:18:5.71:0,6,169	0/0:17,0:19:23.75:0,24,704	0/0:24,0:24:15.05:0,15,273	0/1:18,3:19:50.11:109,0,50	1/1:5,0:10:5.42:111,5,0	0/0:22,0:21:17.64:0,18,319	0/0:10,0:10:6.02:0,6,116	0/0:32,0:32:12.04:0,12,328	0/0:18,0:18:2.96:0,3,62	0/1:10,2:12:53.46:134,0,53	0/0:22,0:27:11.69:0,12,95	0/0:13,0:13:8.56:0,9,165	0/0:15,0:15:12.04:0,12,313	0/0:15,0:16:20.90:0,21,495	0/0:12,0:8:9.03:0,9,161
chr10	69990994	.	CT	C	2719.87	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.427;DP=751;FS=2.603;HRun=3;HaplotypeScore=68.5265;InbreedingCoeff=0.9991;MQ=79.87;MQ0=0;MQRankSum=-2.293;QD=31.26;ReadPosRankSum=2.973;VQSLOD=3.9640;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,138,1948	0/0:9,0:9:27.09:0,27,389	0/0:21,0:21:54.15:0,54,738	0/0:18,0:17:25.80:0,26,555	0/0:27,0:27:69.23:0,69,992	0/0:25,0:25:75.23:0,75,1042	0/0:21,0:21:60.16:0,60,841	0/0:39,0:39:99:0,117,1632	0/0:17,0:17:51.15:0,51,702	0/0:32,0:32:93.29:0,93,1277	0/0:24,0:24:72.24:0,72,1036	0/0:26,0:26:78.24:0,78,1086	0/0:29,0:29:84.27:0,84,1188	0/0:25,0:25:75.21:0,75,1025	0/0:29,0:29:81.23:0,81,1111	0/0:31,0:31:90.27:0,90,1242	1/1:1,24:25:69.22:855,69,0	0/0:17,0:17:48.11:0,48,630	0/0:30,0:30:81.24:0,81,1116	0/0:23,0:23:69.22:0,69,975	0/0:41,0:41:99:0,114,1641	0/0:24,0:24:69.23:0,69,980	1/1:1,20:21:51.16:632,51,0	1/1:1,40:41:99:1375,111,0	0/0:24,0:24:72.24:0,72,1037	0/0:34,0:34:99:0,102,1463	0/0:34,0:34:99:0,102,1445	0/0:15,0:15:45.15:0,45,648
chr10	69991168	.	C	CA	11248.56	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-17.415;DP=783;FS=6.633;HRun=1;HaplotypeScore=75.0827;InbreedingCoeff=1.0000;MQ=81.28;MQ0=0;MQRankSum=-1.389;QD=41.05;ReadPosRankSum=2.610;VQSLOD=5.4220;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,54:55:99:2382,160,0	0/0:12,0:12:36.12:0,36,467	0/0:32,0:32:90.29:0,90,1157	0/0:19,0:19:50.37:0,50,601	1/1:1,30:31:84.07:1184,84,0	0/0:19,0:19:57.17:0,57,725	0/0:21,0:21:63.16:0,63,775	0/0:39,0:39:99:0,111,1406	0/0:20,0:20:60.18:0,60,765	0/0:34,0:34:93.30:0,93,1208	0/0:14,0:14:42.12:0,42,528	0/0:22,0:22:63.20:0,63,818	0/0:18,0:18:54.18:0,54,700	0/0:38,0:38:99:0,114,1480	0/0:29,0:29:87.28:0,87,1129	0/0:36,0:36:99:0,108,1402	0/0:40,0:40:99:0,114,1448	0/0:14,0:14:39.13:0,39,506	1/1:4,23:26:75.25:1110,75,0	1/1:2,35:37:96.24:1389,96,0	1/1:1,41:42:99:1754,117,0	0/0:25,0:25:69.20:0,69,868	0/0:26,0:26:69.21:0,69,881	0/0:28,0:28:81.24:0,81,1035	0/0:23,0:23:69.22:0,69,895	1/1:2,35:37:58.24:1497,58,0	1/1:0,27:27:75.25:1124,75,0	1/1:0,18:18:54.18:809,54,0
chr10	69992069	.	CGT	C	119.89	PASS	AB=0.958;AC=13;AF=0.250;AN=52;BaseQRankSum=-0.038;DP=568;FS=1.074;HRun=0;HaplotypeScore=114.8401;InbreedingCoeff=-0.1019;MQ=54.91;MQ0=9;MQRankSum=0.654;QD=0.57;ReadPosRankSum=-0.510;VQSLOD=1.6644;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:3.48:0,3,42	1/1:3,0:3:0.47:1,0,0	0/0:33,0:22:0:0,0,0	./.	0/0:14,0:14:2.99:0,3,24	0/1:21,0:21:27.72:28,0,131	0/1:22,0:23:1.61:2,0,101	0/0:25,0:21:8.38:0,8,46	0/0:23,0:22:15.51:0,16,192	0/1:18,2:20:15.24:82,0,15	0/1:15,1:16:20.48:20,0,121	0/0:28,0:28:1.79:0,2,241	0/1:24,1:25:13.52:14,0,165	0/1:20,0:22:5.11:5,0,56	0/1:30,0:31:6.96:7,0,284	0/1:19,0:19:5.52:6,0,243	0/0:11,0:11:0.47:0,0,1	0/0:23,0:22:6.38:0,6,48	0/0:25,0:24:14.75:0,15,124	0/0:22,0:22:4.37:0,4,41	0/0:36,0:35:11.37:0,11,85	1/1:14,2:15:3.83:62,4,0	0/0:8,0:7:2.94:0,3,18	./.	0/0:20,0:20:4:0,4,153	0/0:16,0:19:10.95:0,11,78	0/1:13,0:13:14.67:15,0,43	0/0:2,0:8:3:0,3,26
chr10	69995982	.	GAC	G	3566.87	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.521;DP=793;FS=3.095;HRun=0;HaplotypeScore=114.0681;InbreedingCoeff=0.9937;MQ=86.98;MQ0=1;MQRankSum=-2.179;QD=37.95;ReadPosRankSum=3.021;VQSLOD=5.4396;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,138,1542	0/0:11,0:11:33.09:0,33,377	0/0:25,0:25:63.21:0,63,1189	0/0:33,0:32:77.88:0,78,1333	0/0:20,0:20:54.15:0,54,622	0/0:33,0:33:99:0,99,1740	0/0:29,0:29:87.30:0,87,1609	0/0:26,0:26:69.24:0,69,1271	0/0:36,0:36:99:0,108,2023	0/0:38,0:38:99:0,111,2070	0/0:18,0:18:51.17:0,51,924	0/0:27,0:27:78.25:0,78,1421	0/0:37,0:37:99:0,105,1903	0/0:24,0:24:69.24:0,69,1291	0/0:30,0:30:90.31:0,90,1656	0/0:26,0:26:78.27:0,78,1448	1/1:0,29:29:72.23:1060,72,0	0/0:22,0:22:63.12:0,63,687	0/0:14,0:14:14.60:0,15,313	0/0:23,0:23:60.17:0,60,692	0/0:38,0:38:99:0,112,1227	0/0:34,0:34:99:0,102,1846	1/1:1,15:16:39.13:563,39,0	1/1:0,49:48:99:1944,132,0	0/0:31,0:31:90.31:0,90,1670	0/0:29,0:29:81.12:0,81,843	0/0:26,0:26:75.20:0,75,852	0/0:16,0:16:48.14:0,48,574
chr10	69996790	.	CTG	C	717.63	PASS	AB=0.900;AC=24;AF=0.522;AN=46;BaseQRankSum=4.994;DP=759;FS=9.274;HRun=0;HaplotypeScore=129.3545;InbreedingCoeff=0.1469;MQ=53.77;MQ0=19;MQRankSum=-1.304;QD=1.59;ReadPosRankSum=2.225;VQSLOD=2.0618;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,10:41:21.48:172,0,21	./.	./.	./.	1/1:19,6:26:2.75:14,3,0	0/1:14,2:16:11.16:11,0,173	0/1:35,4:36:99:130,0,168	./.	0/1:21,3:24:11.14:11,0,177	0/0:22,0:25:19.58:0,20,211	0/0:9,0:12:0.47:0,0,1	0/0:24,0:24:11.75:0,12,174	0/0:30,0:30:10.54:0,11,343	0/1:36,4:40:5.11:5,0,257	0/0:9,0:19:6:0,6,53	0/1:33,3:34:16.28:16,0,503	1/1:14,0:18:11.15:56,11,0	1/1:13,0:23:25.57:126,26,0	0/0:18,0:17:0:0,0,0	1/1:13,5:18:5.85:46,6,0	1/1:58,7:66:8.86:78,9,0	0/1:20,0:19:14.45:14,0,50	./.	1/1:22,0:26:8.42:42,8,0	0/0:31,0:31:29.97:0,30,347	1/1:28,1:31:5.85:46,6,0	0/1:13,2:15:26.14:26,0,37	1/1:6,1:9:8.85:75,9,0
chr10	69997212	.	AG	A	7662.15	PASS	AB=1.000;AC=52;AF=0.929;AN=56;BaseQRankSum=8.524;DP=520;FS=7.869;HRun=2;HaplotypeScore=302.9153;InbreedingCoeff=0.4145;MQ=51.13;MQ0=0;MQRankSum=-1.242;QD=14.79;ReadPosRankSum=6.216;VQSLOD=3.6706;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:46.98:300,47,0	1/1:15,0:15:26.09:189,26,0	1/1:6,3:9:21.25:134,21,0	0/1:6,0:6:1.56:2,0,47	1/1:26,1:27:60.08:472,60,0	1/1:13,0:13:31.03:182,31,0	1/1:13,0:13:20.36:149,20,0	1/1:23,0:23:14.37:287,14,0	1/1:24,0:24:67.12:384,67,0	1/1:37,0:37:19.75:418,20,0	1/1:20,1:21:47.93:343,48,0	1/1:26,1:27:67.36:427,67,0	1/1:18,0:18:49.86:309,50,0	1/1:16,0:16:46.51:267,47,0	1/1:26,0:26:54.02:338,54,0	1/1:27,0:27:53.72:391,54,0	1/1:6,0:6:14.60:83,15,0	1/1:5,0:5:14.55:81,15,0	0/1:15,0:15:38.97:74,0,39	1/1:21,0:21:57.40:404,57,0	0/0:2,0:2:1.55:0,2,4	1/1:31,0:31:71.61:533,72,0	1/1:33,0:33:54.50:504,55,0	1/1:10,0:10:20.51:120,21,0	1/1:24,0:24:60.33:416,60,0	1/1:22,0:22:56.67:374,57,0	1/1:27,0:27:65.05:403,65,0	1/1:4,0:4:11.82:80,12,0
chr10	69997227	.	TG	T	16006.89	PASS	AB=0.600;AC=53;AF=0.981;AN=54;BaseQRankSum=1.649;DP=476;FS=7.383;HRun=2;HaplotypeScore=270.9536;InbreedingCoeff=-0.0240;MQ=38.90;MQ0=0;MQRankSum=-1.715;QD=33.77;ReadPosRankSum=1.041;VQSLOD=3.1025;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:51.16:653,51,0	1/1:2,11:13:33.11:425,33,0	0/1:1,2:3:41.24:41,0,59	./.	1/1:1,24:25:51.17:659,51,0	1/1:2,9:11:24.08:311,24,0	1/1:0,16:16:36.12:461,36,0	1/1:1,18:19:54.18:701,54,0	1/1:3,20:23:57.18:735,57,0	1/1:1,28:29:84.27:1089,84,0	1/1:1,16:17:42.14:544,42,0	1/1:1,24:25:75.24:958,75,0	1/1:1,17:18:45.15:582,45,0	1/1:2,15:17:45.15:580,45,0	1/1:1,23:24:69.22:888,69,0	1/1:0,29:29:87.28:1116,87,0	1/1:0,5:5:15.05:194,15,0	1/1:0,6:6:18.06:233,18,0	1/1:2,8:10:24.08:309,24,0	1/1:3,19:22:57.18:731,57,0	1/1:0,4:4:6.02:78,6,0	1/1:1,26:27:72.23:929,72,0	1/1:4,24:28:66.21:854,66,0	1/1:0,12:12:30.10:384,30,0	1/1:1,22:23:60.19:769,60,0	1/1:0,19:19:57.19:739,57,0	1/1:3,20:22:63.20:814,63,0	1/1:0,6:6:18.06:230,18,0
chr10	69997246	.	GA	G	14636.02	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=-0.694;DP=491;FS=7.887;HRun=4;HaplotypeScore=268.3106;InbreedingCoeff=0.7823;MQ=34.91;MQ0=0;MQRankSum=-2.444;QD=29.93;ReadPosRankSum=0.957;VQSLOD=1.8485;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:60.18:707,60,0	1/1:2,12:14:36.11:429,36,0	0/0:2,0:2:3.44:0,3,22	./.	1/1:3,16:19:45.11:511,45,0	1/1:0,8:8:24.07:286,24,0	1/1:1,15:16:45.14:537,45,0	1/1:4,18:22:51.15:602,51,0	1/1:4,15:19:51.15:596,51,0	1/1:5,24:29:84.24:986,84,0	1/1:3,15:18:42.13:502,42,0	1/1:4,24:28:75.12:864,75,0	1/1:2,17:19:51.08:579,51,0	1/1:1,18:19:54.16:633,54,0	1/1:3,20:23:63.18:740,63,0	1/1:5,29:34:87.21:1017,87,0	1/1:1,9:10:24.06:275,24,0	1/1:1,6:7:21.02:235,21,0	1/1:6,12:18:39.10:455,39,0	1/1:3,15:18:48.13:561,48,0	1/1:3,9:12:21:232,21,0	1/1:5,18:23:57.16:668,57,0	1/1:5,23:28:60.18:711,60,0	1/1:3,12:15:30.08:353,30,0	1/1:3,19:22:57.16:663,57,0	1/1:0,18:18:54.16:636,54,0	1/1:2,19:21:57.17:677,57,0	1/1:0,5:5:15.05:180,15,0
chr10	69999113	.	C	CCAG	3108.43	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.856;DP=763;FS=4.510;HRun=0;HaplotypeScore=120.8428;InbreedingCoeff=0.9873;MQ=84.51;MQ0=0;MQRankSum=-2.543;QD=60.95;ReadPosRankSum=1.606;VQSLOD=5.4922;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,181,3256	1/1:0,7:7:15.05:369,15,0	0/0:22,0:22:52.83:0,53,942	0/0:28,0:28:78.10:0,78,1260	0/0:20,0:20:57.20:0,57,1063	0/0:26,0:26:78.25:0,78,1399	0/0:38,0:38:99:0,114,2071	0/0:32,0:32:93.31:0,93,1706	0/0:22,0:22:66.21:0,66,1193	0/0:28,0:28:84.28:0,84,1512	0/0:17,0:17:51.16:0,51,902	0/0:32,0:32:96.32:0,96,1752	0/0:37,0:37:99:0,111,2031	0/0:35,0:35:99:0,105,1912	0/0:28,0:28:81.28:0,81,1503	0/0:19,0:19:54.16:0,54,947	0/0:15,0:15:39.13:0,39,722	1/1:5,37:44:99:2858,117,0	0/0:27,0:27:78.26:0,78,1415	0/0:20,0:20:54.19:0,54,992	0/0:59,0:59:99:0,172,3102	0/0:24,0:24:72.25:0,72,1335	0/0:18,0:18:39.13:0,39,722	0/0:17,0:17:30.08:0,30,524	0/0:26,0:26:78.26:0,78,1418	0/0:34,0:33:99:0,102,1861	0/0:21,0:20:63.22:0,63,1162	0/0:6,0:6:18.06:0,18,336
chr10	69999128	.	GTCCCAC	G	726.45	PASS	AB=0.650;AC=5;AF=0.089;AN=56;BaseQRankSum=7.644;DP=732;FS=0.875;HRun=0;HaplotypeScore=168.5044;InbreedingCoeff=0.7794;MQ=79.77;MQ0=0;MQRankSum=-6.569;QD=16.89;ReadPosRankSum=-1.392;VQSLOD=3.2459;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,184,6390	0/0:8,0:8:18.06:0,18,658	0/0:22,0:22:54.18:0,54,1619	0/0:17,0:17:47.95:0,48,1562	0/0:16,0:16:48.16:0,48,1745	0/0:26,0:26:78.27:0,78,2791	0/0:34,0:34:99:0,99,3547	0/0:32,0:32:90.31:0,90,3104	0/0:28,0:28:81.25:0,81,2943	0/0:25,0:25:75.26:0,75,2683	0/0:16,0:16:45.15:0,45,1640	0/0:30,0:30:87.30:0,87,2994	0/0:33,0:33:96.33:0,96,3384	0/0:36,0:36:99:0,105,3668	0/0:32,0:32:93.32:0,93,3354	0/0:20,0:20:60.21:0,60,2180	0/1:6,7:13:12.99:296,0,13	0/0:40,0:40:99:0,108,3890	0/0:28,0:28:74.75:0,75,2562	0/0:20,0:20:57.20:0,57,2065	0/0:64,0:64:99:0,193,6640	0/0:22,0:22:63.22:0,63,2178	1/1:4,12:16:18.93:290,19,0	1/1:3,11:14:16.30:267,16,0	0/0:22,0:22:63.22:0,63,2252	0/0:30,0:30:90.29:0,90,2967	0/0:19,0:18:57.18:0,57,2001	0/0:7,0:7:21.05:0,21,666
chr10	69999136	.	GGA	G	363.06	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.006;DP=717;FS=6.564;HRun=0;HaplotypeScore=107.7757;InbreedingCoeff=0.9810;MQ=81.25;MQ0=0;MQRankSum=-6.450;QD=11.71;ReadPosRankSum=-0.075;VQSLOD=2.9745;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,178,3506	0/0:6,0:6:18.06:0,18,365	0/0:21,0:21:54.18:0,54,990	0/0:22,0:22:64.59:0,65,1142	0/0:19,0:19:57.18:0,57,1095	0/0:27,0:27:81.28:0,81,1634	0/0:37,0:37:99:0,111,2201	0/0:30,0:30:90.31:0,90,1812	0/0:30,0:30:87.28:0,87,1768	0/0:26,0:26:78.26:0,78,1509	0/0:16,0:16:45.15:0,45,914	0/0:30,0:30:90.28:0,90,1752	0/0:32,0:32:93.32:0,93,1858	0/0:33,0:33:99:0,99,1972	0/0:31,0:31:93.32:0,93,1879	0/0:20,0:20:60.21:0,60,1211	1/1:1,7:8:21.04:219,21,0	0/0:43,0:43:99:0,123,2449	0/0:30,0:30:83.87:0,84,1653	0/0:22,0:22:66.23:0,66,1341	0/0:59,0:59:99:0,169,3376	0/0:19,0:19:54.19:0,54,1097	1/1:0,12:12:15:142,15,0	1/1:0,11:11:14.81:140,15,0	0/0:21,0:21:63.22:0,63,1261	0/0:28,0:28:81.28:0,81,1646	0/0:18,0:17:54.19:0,54,1085	0/0:6,0:6:18.06:0,18,365
chr10	69999638	.	TG	T	919.21	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.642;DP=737;FS=0.000;HRun=3;HaplotypeScore=72.6569;InbreedingCoeff=0.9997;MQ=82.63;MQ0=0;MQRankSum=-3.724;QD=30.64;ReadPosRankSum=1.353;VQSLOD=3.4004;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1609	1/1:1,10:11:30.09:372,30,0	0/0:20,0:20:47.97:0,48,569	0/0:26,0:26:62.63:0,63,751	0/0:27,0:27:81.26:0,81,1146	0/0:25,0:25:72.22:0,72,1000	0/0:31,0:31:90.28:0,90,1259	0/0:24,0:24:72.24:0,72,1036	0/0:28,0:28:81.25:0,81,1129	0/0:29,0:29:78.25:0,78,1099	0/0:23,0:23:63.21:0,63,905	0/0:32,0:32:93.30:0,93,1320	0/0:29,0:29:87.27:0,87,1213	0/0:28,0:28:84.27:0,84,1187	0/0:38,0:38:99:0,111,1565	0/0:27,0:27:81.27:0,81,1164	0/0:29,0:29:84.28:0,84,1209	1/1:0,19:19:54.17:669,54,0	0/0:28,0:28:81.25:0,81,1128	0/0:18,0:18:54.17:0,54,753	0/0:22,0:22:66.18:0,66,894	0/0:37,0:37:99:0,105,1454	0/0:22,0:22:63.20:0,63,888	0/0:25,0:25:72.22:0,72,1017	0/0:28,0:28:75.24:0,75,1062	0/0:29,0:29:81.26:0,81,1147	0/0:29,0:29:81.26:0,81,1147	0/0:14,0:14:42.14:0,42,604
chr10	70000258	.	T	TA	5028.67	PASS	AB=0.574;AC=19;AF=0.339;AN=56;BaseQRankSum=-7.542;DP=685;FS=2.833;HRun=11;HaplotypeScore=80.2267;InbreedingCoeff=0.8432;MQ=71.62;MQ0=0;MQRankSum=0.691;QD=19.42;ReadPosRankSum=-2.025;VQSLOD=5.1004;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,37:43:61.98:954,62,0	1/1:1,9:11:23.88:227,24,0	0/0:11,0:10:16.75:0,17,110	0/0:19,0:19:7.33:0,7,153	1/1:12,18:30:4.86:492,5,0	0/0:25,1:29:37.29:0,37,456	0/0:29,1:32:54.28:0,54,579	0/0:28,0:27:37.35:0,37,436	0/0:16,0:16:32.86:0,33,255	0/0:35,0:37:91.04:0,91,687	0/0:25,0:25:61.30:0,61,459	0/0:21,0:21:50.76:0,51,392	0/0:20,0:22:46.11:0,46,353	0/0:26,0:27:67.76:0,68,517	0/0:34,0:34:83.61:0,84,646	0/0:18,0:18:47.79:0,48,369	0/0:26,0:26:59.70:0,60,459	1/1:3,13:16:36.06:360,36,0	1/1:4,15:19:42.07:420,42,0	1/1:8,33:42:15.01:833,15,0	1/1:7,18:25:24.86:434,25,0	0/0:24,0:24:35.68:0,36,457	0/0:12,1:13:2.43:0,2,202	0/0:17,0:18:43.83:0,44,325	0/0:24,0:24:56.75:0,57,441	1/1:8,31:39:87.07:845,87,0	0/1:7,20:27:12.58:403,0,13	1/1:3,4:7:6.01:61,6,0
chr10	70008573	.	AT	A	339.66	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.352;DP=699;FS=4.245;HRun=8;HaplotypeScore=67.6792;InbreedingCoeff=0.9229;MQ=72.08;MQ0=1;MQRankSum=0.653;QD=19.98;ReadPosRankSum=-0.305;VQSLOD=3.4245;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.20:0,69,821	0/0:12,0:12:36.11:0,36,434	0/0:21,0:18:9.79:0,10,324	0/0:11,0:10:11.89:0,12,124	0/0:32,0:32:93.23:0,93,1096	0/0:31,0:32:87.12:0,87,1018	0/0:21,0:21:40.36:0,40,689	0/0:26,0:26:66.20:0,66,789	0/0:19,0:19:54.15:0,54,641	0/0:35,0:35:87.26:0,87,1043	0/0:30,0:30:81.21:0,81,937	0/0:17,0:17:48.13:0,48,568	0/0:21,0:21:60.16:0,60,704	0/0:22,0:22:60.18:0,60,725	0/0:21,0:21:57.15:0,57,665	0/0:22,0:22:66.20:0,66,797	0/0:34,0:34:87.27:0,87,1051	1/1:1,16:17:45.07:434,45,0	0/0:27,0:27:63.18:0,63,743	0/0:47,0:47:99:0,138,1645	0/0:8,0:8:24.07:0,24,289	0/0:30,0:30:90.26:0,90,1075	0/0:30,0:30:87.27:0,87,1051	0/0:20,0:20:57.15:0,57,665	0/0:36,0:36:99:0,102,1223	0/0:32,0:32:93.29:0,93,1122	0/0:35,0:33:96.29:0,96,1159	0/0:16,0:16:48.09:0,48,532
chr10	70009112	.	CGTGTGTGTGTGTGTAT	C	250.64	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.848;DP=659;FS=0.000;HRun=0;HaplotypeScore=250.7222;InbreedingCoeff=0.8631;MQ=69.23;MQ0=14;MQRankSum=-1.166;QD=11.94;ReadPosRankSum=-1.441;VQSLOD=2.0712;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:38.85:0,39,435	1/1:1,8:9:2.44:126,2,0	0/0:37,0:28:12.54:0,13,358	0/0:37,0:20:25.07:0,25,381	0/0:19,0:19:25.31:0,25,909	0/0:37,0:37:54.18:0,54,3016	0/0:27,0:27:42.06:0,42,1762	0/0:28,0:28:44.86:0,45,745	0/0:23,0:23:54.27:0,54,1519	0/0:26,0:25:63.14:0,63,2802	0/0:13,0:11:18.02:0,18,458	0/0:17,0:17:32.96:0,33,1176	0/0:22,0:23:54.59:0,55,1721	0/0:24,0:24:45.46:0,45,1488	0/0:19,0:19:41.68:0,42,1685	0/0:23,0:23:38.89:0,39,1522	0/0:29,0:28:31.02:0,31,339	1/1:12,0:11:23.13:232,23,0	0/0:18,0:17:32.40:0,32,491	0/0:19,0:19:30.02:0,30,782	0/0:29,0:26:18.44:0,18,268	0/0:19,0:19:42.08:0,42,1331	0/0:18,0:18:17.98:0,18,189	0/0:25,0:25:27.19:0,27,221	0/0:24,0:24:45.58:0,46,2289	0/0:24,0:24:44.95:0,45,1426	0/0:17,0:17:39.10:0,39,1601	0/0:16,0:15:32.58:0,33,624
chr10	70009127	.	ATGTGTGTGTG	A	881.15	PASS	AB=0.964;AC=5;AF=0.089;AN=56;BaseQRankSum=-1.297;DP=658;FS=22.172;HRun=0;HaplotypeScore=176.9302;InbreedingCoeff=0.4678;MQ=50.33;MQ0=39;MQRankSum=3.665;QD=14.45;ReadPosRankSum=2.308;VQSLOD=1.4623;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:37:3.01:0,3,62	1/1:8,0:8:3.31:60,3,0	0/0:23,0:14:2.99:0,3,23	0/0:30,0:13:3.01:0,3,42	0/0:18,0:18:15.05:0,15,303	0/0:34,0:34:45.14:0,45,1316	0/0:23,0:21:24.55:0,25,802	0/0:26,0:25:27.09:0,27,642	0/0:26,0:26:24.41:0,24,708	0/0:27,0:26:45.62:0,46,1534	0/0:14,0:12:6:0,6,143	0/0:20,0:18:21.47:0,21,523	0/0:31,0:30:43.10:0,43,935	0/0:26,0:25:23.58:0,24,668	0/0:20,0:19:21.53:0,22,751	0/0:21,0:19:21.07:0,21,708	0/1:26,1:26:5.86:386,0,6	0/0:12,0:10:2.87:0,3,70	0/0:20,0:19:18:0,18,263	0/0:22,0:21:12.50:0,12,248	0/0:29,0:22:3.01:0,3,58	0/0:27,0:26:18.05:0,18,404	0/0:8,6:14:0:0,0,0	1/1:26,0:25:18.37:550,18,0	0/0:22,0:21:33.58:0,34,1100	0/0:26,0:26:54.01:0,54,1010	0/0:28,0:26:58.87:0,59,798	0/0:14,0:12:6.02:0,6,146
chr10	70009162	.	TGTGAGAGAGAGAGAGAGAGA	T	1980.39	PASS	AB=1.000;AC=12;AF=0.240;AN=50;BaseQRankSum=1.220;DP=528;FS=12.368;HRun=0;HaplotypeScore=201.8259;InbreedingCoeff=0.2662;MQ=41.39;MQ0=40;MQRankSum=-0.908;QD=10.48;ReadPosRankSum=1.168;VQSLOD=1.9313;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,22:31:3.01:0,3,140	0/0:9,0:9:4.34:0,4,527	./.	./.	1/1:11,0:11:5.96:43,6,0	0/1:29,0:28:39.52:40,0,639	0/0:26,0:23:16.20:0,16,256	0/0:13,0:12:20.68:0,21,135	0/0:22,0:22:38.42:0,38,1610	0/0:27,0:26:43.76:0,44,2498	0/0:14,0:13:6.45:0,6,246	0/0:16,0:12:16.88:0,17,513	0/0:26,0:25:29.56:0,30,1599	0/1:22,0:21:15.06:15,0,828	0/0:20,0:19:27.49:0,27,1102	0/0:17,0:14:16.26:0,16,327	0/0:30,0:29:35.28:0,35,2487	0/0:7,0:5:12.04:0,12,673	0/1:17,0:17:2.71:325,0,3	0/1:20,0:19:42.62:56,0,43	0/0:27,0:18:0.47:0,0,1	0/0:15,0:15:5.97:0,6,176	./.	0/0:27,0:24:13.20:0,13,1383	0/1:21,0:20:48.30:48,0,220	0/1:29,0:27:26.46:429,0,26	1/1:25,0:26:55.04:988,55,0	1/1:12,0:8:8.78:186,9,0
chr10	70009164	.	TGAGAGAGAGAGAGAGA	T	1555.83	PASS	AC=10;AF=0.208;AN=48;BaseQRankSum=4.718;DP=536;FS=12.764;HRun=0;HaplotypeScore=183.2927;InbreedingCoeff=0.5898;MQ=41.23;MQ0=41;MQRankSum=-3.669;QD=13.53;ReadPosRankSum=1.910;VQSLOD=2.0910;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:31:3.01:0,3,120	0/0:9,0:9:9.03:0,9,448	./.	./.	./.	0/0:28,0:27:12.04:0,12,432	0/0:19,0:24:7.85:0,8,113	0/0:13,0:12:4.83:0,5,98	0/0:22,0:22:32.33:0,32,1238	0/0:27,0:25:39.13:0,39,2012	0/0:14,0:13:3.48:0,3,201	0/0:16,0:12:10.86:0,11,290	0/0:26,0:25:39.13:0,39,1426	0/0:22,0:21:15.05:0,15,665	0/0:21,0:20:21.54:0,22,1198	0/0:17,0:14:3.48:0,3,206	0/0:31,0:30:53.43:0,53,2355	0/0:8,0:6:15.05:0,15,710	1/1:14,4:18:4.22:346,4,0	0/0:14,5:18:0.47:0,0,1	1/1:23,0:18:2.86:17,3,0	0/0:15,0:15:3.01:0,3,130	./.	0/0:29,0:26:31.41:0,31,1449	0/0:22,0:21:3:0,3,29	1/1:27,3:28:8.36:266,8,0	1/1:19,4:25:24.08:940,24,0	1/1:10,0:8:3.01:121,3,0
chr10	70017909	.	TTCTC	T	69.79	PASS	AB=0.969;AC=5;AF=0.179;AN=28;BaseQRankSum=2.399;DP=453;FS=14.075;HRun=0;HaplotypeScore=84.8396;InbreedingCoeff=0.0612;MQ=64.21;MQ0=12;MQRankSum=0.360;QD=0.87;ReadPosRankSum=1.860;VQSLOD=0.4632;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:30,0:19:0:0,0,0	./.	./.	1/1:22,3:25:3.01:46,3,0	0/0:27,0:27:1.25:0,1,3	0/1:14,0:14:11.25:11,0,31	0/0:18,0:18:21.05:0,21,348	0/0:15,0:15:3.01:0,3,64	0/1:19,1:20:33.67:34,0,178	0/0:18,0:17:6.49:0,6,122	0/0:12,0:11:3.01:0,3,70	0/0:18,0:18:2.72:0,3,63	0/1:20,1:21:60.78:68,0,61	./.	0/0:20,0:21:10.01:0,10,152	./.	./.	./.	./.	./.	./.	./.	0/0:15,0:15:0.47:0,0,1	0/0:12,0:12:0:0,0,0	./.
chr10	70017970	.	A	ATG	153.73	PASS	AB=1.000;AC=5;AF=0.109;AN=46;BaseQRankSum=2.547;DP=380;FS=1.636;HRun=0;HaplotypeScore=124.3634;InbreedingCoeff=0.4285;MQ=51.16;MQ0=14;MQRankSum=-2.408;QD=2.70;ReadPosRankSum=-1.087;VQSLOD=2.6279;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:12.04:0,12,144	./.	0/0:38,0:8:8.96:0,9,89	0/1:30,0:8:1.41:1,0,85	0/0:9,0:9:3.01:0,3,36	0/0:13,0:13:9.01:0,9,97	0/0:24,0:24:9.76:0,10,194	0/0:20,0:20:13.89:0,14,384	0/0:13,0:13:9.01:0,9,93	0/0:15,0:14:9.05:0,9,280	./.	0/0:13,0:13:14.82:0,15,146	0/0:12,0:11:6.49:0,6,73	0/0:12,0:11:5.50:0,6,45	0/0:11,0:11:12.04:0,12,142	0/0:11,0:11:5.09:0,5,25	./.	1/1:5,8:13:15.02:203,15,0	0/0:6,0:5:8.62:0,9,102	0/0:12,0:11:11.98:0,12,115	0/0:8,0:8:11.62:0,12,116	./.	1/1:12,0:12:5.23:53,5,0	./.	0/0:11,0:11:6.01:0,6,62	0/0:21,0:19:38.18:0,38,389	0/0:6,0:6:1.55:0,2,4	0/0:4,0:4:5.71:0,6,31
chr10	70021769	.	C	CT	2951.63	PASS	AB=0.820;AC=26;AF=0.481;AN=54;BaseQRankSum=-5.519;DP=360;FS=0.908;HRun=11;HaplotypeScore=33.6518;InbreedingCoeff=0.8036;MQ=56.53;MQ0=11;MQRankSum=0.717;QD=15.87;ReadPosRankSum=2.164;VQSLOD=3.6835;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:22:42.08:426,42,0	1/1:0,10:10:27.05:274,27,0	0/0:12,0:9:6.77:0,7,43	./.	1/1:2,15:17:12.84:312,13,0	0/0:15,0:15:38.83:0,39,302	0/0:11,0:11:17.89:0,18,139	0/0:31,0:28:65.67:0,66,494	0/0:10,0:9:20.92:0,21,163	0/0:14,0:12:26.39:0,26,194	0/0:10,0:10:29.89:0,30,232	0/1:7,0:7:11.88:12,0,58	0/0:13,0:13:29.83:0,30,228	0/0:9,0:9:26.88:0,27,206	0/0:13,0:13:26.88:0,27,209	0/0:7,1:8:14.93:0,15,116	1/1:3,0:11:13.73:65,14,0	1/1:3,8:12:20.71:181,21,0	0/1:7,8:16:0.72:210,0,1	1/1:1,22:25:59.95:593,60,0	1/1:2,6:8:15.03:152,15,0	0/0:5,0:4:8.96:0,9,70	1/1:0,0:7:2.84:14,3,0	1/1:1,1:3:2.84:14,3,0	0/0:19,0:18:47.80:0,48,371	1/1:1,14:15:42.08:424,42,0	1/1:5,7:12:18.03:178,18,0	1/1:5,11:15:30.06:305,30,0
chr10	70023773	.	G	GA	5271.92	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-13.934;DP=547;FS=3.111;HRun=7;HaplotypeScore=51.9262;InbreedingCoeff=0.9988;MQ=73.98;MQ0=0;MQRankSum=-3.111;QD=28.97;ReadPosRankSum=0.111;VQSLOD=5.3750;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:22:42.13:507,42,0	0/0:15,0:15:45.01:0,45,418	0/0:16,0:15:37.93:0,38,315	0/0:15,0:15:38.82:0,39,350	1/1:8,25:33:75.08:846,75,0	0/0:19,0:19:57.08:0,57,546	0/0:20,0:20:57.07:0,57,542	0/0:29,0:29:72.09:0,72,686	0/0:9,0:9:21.03:0,21,203	0/0:23,0:23:63.07:0,63,597	0/0:17,0:17:45.07:0,45,434	0/0:16,0:16:39.06:0,39,377	0/0:20,0:20:51.08:0,51,493	0/0:13,0:13:26.98:0,27,246	0/0:30,0:30:84.11:0,84,801	0/0:24,0:24:66.03:0,66,620	0/0:24,0:24:60.08:0,60,574	0/0:17,0:17:42.06:0,42,405	1/1:1,12:13:36.08:419,36,0	1/1:1,22:23:66.20:795,66,0	1/1:1,19:20:42.13:507,42,0	0/0:13,0:13:39.05:0,39,372	0/0:13,0:13:39.03:0,39,364	0/0:9,0:9:27.02:0,27,254	0/0:23,0:23:63.09:0,63,604	1/1:4,24:28:72.20:856,72,0	1/1:2,31:33:81.25:978,81,0	1/1:0,10:10:30.09:362,30,0
chr10	70025339	.	G	GA	4239.70	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-9.308;DP=563;FS=11.876;HRun=9;HaplotypeScore=57.8667;InbreedingCoeff=0.9816;MQ=75.32;MQ0=0;MQRankSum=0.500;QD=22.55;ReadPosRankSum=1.793;VQSLOD=5.1024;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,27:35:80.58:864,81,0	0/0:6,0:6:14.99:0,15,130	0/0:15,1:17:24.61:0,25,186	0/0:5,0:6:14.96:0,15,123	1/1:7,33:39:35.12:844,35,0	0/0:21,0:21:53.95:0,54,465	0/0:23,0:23:56.98:0,57,495	0/0:26,0:26:62.96:0,63,545	0/0:17,0:17:47.99:0,48,417	0/0:28,0:28:74.94:0,75,643	0/0:17,0:17:41.98:0,42,364	0/0:23,0:23:62.98:0,63,547	0/0:13,0:13:32.99:0,33,287	0/0:12,0:12:32.99:0,33,287	0/0:23,0:23:59.98:0,60,521	0/0:22,0:22:59.97:0,60,517	0/0:22,0:22:50.98:0,51,443	0/0:20,0:20:56.98:0,57,494	1/1:7,12:19:36.10:398,36,0	1/1:8,24:32:43.09:690,43,0	1/1:3,7:10:18.52:200,19,0	0/0:20,0:20:56.97:0,57,491	0/0:15,0:15:41.99:0,42,365	0/0:9,0:9:26.99:0,27,234	0/0:34,0:34:86.96:0,87,752	1/1:3,17:21:18.08:446,18,0	1/1:2,24:25:63.17:697,63,0	1/1:1,4:5:9.02:100,9,0
chr10	70025657	.	A	ATGCTG	1979.48	PASS	AB=0.818;AC=20;AF=0.385;AN=52;BaseQRankSum=-4.602;DP=585;FS=6.842;HRun=0;HaplotypeScore=155.8983;InbreedingCoeff=0.7607;MQ=84.47;MQ0=2;MQRankSum=-2.161;QD=9.04;ReadPosRankSum=-1.716;VQSLOD=2.1802;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,14:34:12.04:337,12,0	./.	0/0:37,0:34:15.01:0,15,219	0/0:52,0:42:14.55:0,15,136	0/1:9,11:21:0:1,0,0	0/0:21,0:21:18.06:0,18,299	0/0:21,0:21:14.88:0,15,270	0/0:21,0:21:6.02:0,6,108	0/0:22,0:22:12.01:0,12,184	0/0:24,0:23:41.02:0,41,651	0/0:17,0:17:12.04:0,12,216	0/0:31,0:31:39.12:0,39,648	0/0:24,0:24:21.07:0,21,363	0/0:15,0:15:12.04:0,12,217	0/0:12,0:12:5.85:0,6,95	0/0:22,0:22:9.29:0,9,163	1/1:12,0:14:9.03:161,9,0	1/1:10,0:12:3.01:65,3,0	1/1:13,3:15:9.03:252,9,0	1/1:9,8:16:3.01:84,3,0	1/1:24,17:42:18.02:440,18,0	0/0:16,0:16:15.05:0,15,270	./.	0/1:20,0:20:0:0,0,0	0/0:21,0:21:21.07:0,21,366	1/1:11,6:17:18.06:504,18,0	1/1:7,11:18:5.97:167,6,0	1/1:5,3:8:6.02:144,6,0
chr10	70033692	.	GCTCAATGGGGAAGAAC	G	3682.70	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.003;DP=759;FS=2.434;HRun=0;HaplotypeScore=320.6079;InbreedingCoeff=0.9976;MQ=88.79;MQ0=0;MQRankSum=-9.051;QD=68.20;ReadPosRankSum=1.342;VQSLOD=2.9569;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,8333	0/0:12,0:12:33.11:0,33,2329	0/0:30,0:30:84.29:0,84,5137	0/0:27,0:27:69.20:0,69,3392	0/0:35,0:35:99:0,99,6762	0/0:23,0:23:69.24:0,69,5021	0/0:29,0:29:78.27:0,78,5388	0/0:35,0:35:96.32:0,96,6252	0/0:28,0:28:72.23:0,72,4815	0/0:35,0:35:96.33:0,96,6232	0/0:24,0:24:66.23:0,66,4311	0/0:26,0:26:72.25:0,72,5020	0/0:30,0:30:87.30:0,87,6135	0/0:34,0:34:93.32:0,93,7122	0/0:43,0:43:99:0,126,9148	0/0:30,0:30:84.29:0,84,5999	1/1:6,16:22:33.11:1496,33,0	0/0:21,0:21:60.21:0,60,4243	0/0:23,0:23:66.22:0,66,4027	0/0:25,0:25:75.26:0,75,5715	0/0:32,0:32:96.32:0,96,6567	0/0:32,0:32:87.30:0,87,6215	1/1:4,9:13:21.07:864,21,0	1/1:7,12:19:33.07:1322,33,0	0/0:25,0:25:75.26:0,75,5346	0/0:29,0:29:81.28:0,81,5353	0/0:27,0:27:75.26:0,75,5534	0/0:8,0:8:24.08:0,24,1871
chr10	70034443	.	ATGTTCC	A	536.23	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.513;DP=576;FS=5.467;HRun=0;HaplotypeScore=117.4198;InbreedingCoeff=0.9735;MQ=91.23;MQ0=0;MQRankSum=-4.859;QD=28.22;ReadPosRankSum=0.740;VQSLOD=2.6767;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,4305	1/1:0,6:6:12.04:288,12,0	0/0:32,0:32:87.23:0,87,2730	0/0:18,0:18:51.17:0,51,1644	0/0:10,0:10:30.10:0,30,1080	0/0:27,0:27:81.28:0,81,2782	0/0:19,0:19:51.65:0,52,1740	0/0:41,0:41:99:0,117,4035	0/0:20,0:20:57.18:0,57,1910	0/0:20,0:20:57.20:0,57,2027	0/0:15,0:15:42.14:0,42,1334	0/0:13,0:13:33.11:0,33,1126	0/0:19,0:19:54.19:0,54,1824	0/0:11,0:11:30.10:0,30,1044	0/0:18,0:18:48.16:0,48,1471	0/0:20,0:20:57.20:0,57,2051	0/0:33,0:33:96.31:0,96,3352	1/1:4,9:13:15.05:361,15,0	0/0:23,0:23:66.23:0,66,2339	0/0:16,0:16:48.16:0,48,1688	0/0:32,0:32:90.29:0,90,3057	0/0:21,0:21:63.22:0,63,2116	0/0:10,0:10:30.10:0,30,1076	0/0:21,0:21:60.21:0,60,2164	0/0:20,0:20:57.20:0,57,1999	0/0:16,0:16:48.16:0,48,1700	0/0:28,0:28:84.29:0,84,2931	0/0:11,0:11:24.08:0,24,865
chr10	70034555	.	AGT	A	1273.24	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=1.406;DP=310;FS=10.537;HRun=0;HaplotypeScore=48.4173;InbreedingCoeff=0.9083;MQ=68.16;MQ0=13;MQRankSum=0.252;QD=16.98;ReadPosRankSum=-0.520;VQSLOD=2.3239;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:10:17.51:139,18,0	0/0:7,0:7:10.17:0,10,98	0/0:31,0:15:41.82:0,42,382	0/0:33,0:13:10.72:0,11,198	./.	0/0:14,0:14:17.80:0,18,127	0/0:12,0:12:21.36:0,21,191	1/1:22,0:20:53.70:458,54,0	0/0:10,0:10:23.82:0,24,175	0/0:15,0:15:41.83:0,42,359	0/0:6,0:6:11.92:0,12,91	0/0:15,0:15:25.78:0,26,200	0/0:9,0:9:26.70:0,27,211	0/0:7,0:7:13.87:0,14,88	0/0:11,0:11:20.65:0,21,150	0/0:12,0:12:29.90:0,30,247	0/0:9,0:9:20.84:0,21,153	0/0:3,0:3:5.92:0,6,39	1/1:8,0:7:21.01:188,21,0	1/1:12,0:11:29.92:241,30,0	1/1:4,0:4:8.99:75,9,0	0/0:10,0:10:26.67:0,27,192	0/0:6,0:6:14.96:0,15,119	0/0:5,0:5:8.20:0,8,53	0/0:14,0:14:38.68:0,39,295	1/1:6,0:6:17.94:151,18,0	1/1:2,0:2:5.96:44,6,0	1/1:9,0:8:23.81:173,24,0
chr10	70035376	.	CCTTTT	C	597.95	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.620;DP=653;FS=0.000;HRun=0;HaplotypeScore=119.5904;InbreedingCoeff=0.9042;MQ=88.61;MQ0=0;MQRankSum=-3.120;QD=33.22;ReadPosRankSum=2.197;VQSLOD=3.4115;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,3834	0/0:23,0:23:69.24:0,69,2061	0/0:32,0:32:91.15:0,91,2388	0/0:23,0:23:57.20:0,57,1564	0/0:25,0:25:75.25:0,75,2231	0/0:26,0:26:69.24:0,69,2139	0/0:25,0:25:66.21:0,66,1963	0/0:39,0:39:99:0,108,3308	0/0:23,0:23:63.22:0,63,1922	0/0:23,0:23:63.22:0,63,1954	0/0:13,0:13:33.11:0,33,1018	0/0:34,0:34:99:0,99,3026	0/0:26,0:26:72.25:0,72,2220	0/0:23,0:23:63.22:0,63,1938	0/0:27,0:27:78.27:0,78,2402	0/0:22,0:22:63.22:0,63,1912	0/0:25,0:25:75.23:0,75,2186	1/1:4,14:18:33.11:693,33,0	0/0:18,0:18:48.15:0,48,1420	0/0:17,0:17:48.16:0,48,1420	0/0:14,0:14:42.14:0,42,1290	0/0:16,0:16:48.16:0,48,1476	0/0:22,0:22:63.20:0,63,1864	0/0:26,0:26:75.22:0,75,2079	0/0:20,0:20:54.16:0,54,1589	0/0:18,0:18:51.18:0,51,1579	0/0:29,0:29:78.27:0,78,2369	0/0:3,0:3:5.98:0,6,96
chr10	70039845	.	CT	C	5552.85	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=16.015;DP=685;FS=6.541;HRun=2;HaplotypeScore=83.2694;InbreedingCoeff=0.9997;MQ=81.88;MQ0=0;MQRankSum=-3.594;QD=34.49;ReadPosRankSum=-0.291;VQSLOD=4.6870;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:54.18:700,54,0	0/0:11,0:11:33.11:0,33,494	0/0:21,0:21:56.35:0,56,842	0/0:19,0:19:56.60:0,57,727	1/1:1,35:36:93.30:1206,93,0	0/0:33,0:33:99:0,99,1405	0/0:16,0:16:48.14:0,48,681	1/1:0,38:38:99:1434,114,0	0/0:22,0:22:63.21:0,63,944	0/0:37,0:37:99:0,111,1639	0/0:28,0:28:81.27:0,81,1202	0/0:29,0:29:84.26:0,84,1220	0/0:18,0:18:54.16:0,54,769	0/0:26,0:26:78.25:0,78,1146	0/0:30,0:30:90.30:0,90,1331	0/0:21,0:21:60.18:0,60,862	1/1:0,12:12:36.12:464,36,0	1/1:3,15:18:39.13:506,39,0	0/0:21,0:21:60.18:0,60,844	0/0:30,0:30:90.27:0,90,1292	0/0:26,0:26:78.26:0,78,1164	0/0:28,0:28:84.25:0,84,1197	1/1:0,22:22:60.19:775,60,0	1/1:0,14:14:36.12:467,36,0	0/0:24,0:23:72.21:0,72,1038	0/0:32,0:32:93.28:0,93,1322	0/0:43,0:43:99:0,129,1902	0/0:9,0:9:27.09:0,27,404
chr10	70040201	.	T	TGCTATGA	14129.01	PASS	AB=0.972;AC=15;AF=0.268;AN=56;BaseQRankSum=1.429;DP=783;FS=0.349;HRun=0;HaplotypeScore=173.2084;InbreedingCoeff=0.9087;MQ=60.77;MQ0=0;MQRankSum=-14.937;QD=67.93;ReadPosRankSum=-6.637;VQSLOD=3.4204;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:4,11:19:42.14:1635,42,0	0/0:10,0:10:27.09:0,27,712	0/0:16,0:14:36.09:0,36,753	0/0:24,0:20:49.31:0,49,992	1/1:9,17:34:51.18:2030,51,0	0/0:35,0:35:99:0,102,2590	0/0:35,0:35:90.68:0,91,2593	1/1:25,17:50:99:4843,147,0	0/0:25,0:25:75.26:0,75,1959	0/0:33,0:33:96.33:0,96,2488	0/0:28,0:28:81.28:0,81,2080	0/0:39,0:39:99:0,108,2834	0/0:25,0:25:75.26:0,75,1959	0/0:30,0:30:90.31:0,90,2339	0/0:36,0:36:99:0,105,2691	0/0:44,0:44:99:0,117,3035	1/1:8,9:18:35.86:1236,36,0	1/1:4,6:15:24.08:907,24,0	0/0:20,0:20:60.21:0,60,1479	0/0:26,0:26:69.24:0,69,1774	0/0:36,0:36:99:0,105,2769	0/0:29,0:29:84.27:0,84,2119	1/1:7,7:15:27.09:1086,27,0	1/1:6,16:22:60:2372,60,0	0/0:30,0:30:81.25:0,81,1991	0/1:34,1:35:21.60:22,0,2432	0/0:42,0:41:99:0,120,3038	0/0:12,0:12:36.08:0,36,837
chr10	70040528	.	CT	C	2758.18	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.374;DP=563;FS=0.808;HRun=11;HaplotypeScore=99.9715;InbreedingCoeff=0.9341;MQ=64.24;MQ0=2;MQRankSum=-0.967;QD=15.50;ReadPosRankSum=0.176;VQSLOD=3.8140;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,36:43:51.87:633,52,0	0/0:1,0:7:17.08:0,17,86	0/0:10,0:8:12.02:0,12,122	0/0:11,0:9:4.88:0,5,97	1/1:6,18:24:15.97:337,16,0	0/0:24,0:25:59.92:0,60,601	0/0:12,1:12:8.44:0,8,295	1/1:7,30:37:86.88:714,87,0	0/0:18,0:18:39.10:0,39,415	0/0:24,1:25:44.47:0,44,656	0/0:17,0:17:38.93:0,39,398	0/0:26,1:28:38.32:0,38,582	0/0:20,1:21:20.45:0,20,415	0/0:21,0:21:27.84:0,28,476	0/0:21,1:22:45.11:0,45,480	0/0:24,0:23:51.10:0,51,528	1/1:5,22:27:59.92:493,60,0	1/1:7,13:19:10.59:288,11,0	0/0:16,0:17:32.82:0,33,317	0/0:14,1:15:8.91:0,9,296	0/0:12,1:13:18.03:0,18,184	0/0:9,0:9:24.06:0,24,256	1/1:1,13:14:38.91:314,39,0	1/1:3,7:10:20.97:172,21,0	0/0:22,1:23:54.98:0,55,562	0/0:23,1:25:44.38:0,44,661	0/0:26,0:26:60.14:0,60,632	0/0:13,0:13:31.26:0,31,297
chr10	70041465	.	GGT	G	424.20	PASS	AB=0.949;AC=30;AF=0.652;AN=46;BaseQRankSum=6.600;DP=673;FS=7.425;HRun=0;HaplotypeScore=108.0262;InbreedingCoeff=-0.0746;MQ=65.37;MQ0=7;MQRankSum=-0.725;QD=0.90;ReadPosRankSum=3.005;VQSLOD=1.1830;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:2.84:14,3,0	1/1:6,0:7:5.68:28,6,0	./.	./.	1/1:13,0:23:8.52:42,9,0	0/1:21,0:21:1.58:2,0,78	0/1:24,0:25:27.98:28,0,118	./.	0/0:29,0:29:18.04:0,18,242	0/0:34,0:34:19.29:0,19,226	0/1:13,2:15:25.86:26,0,38	1/1:17,7:25:10.50:83,11,0	0/1:21,0:21:0.13:0,0,277	0/1:19,1:20:11.03:11,0,166	0/1:19,2:22:22.02:22,0,176	0/1:29,0:29:42.71:43,0,204	1/1:28,0:35:11.36:56,11,0	0/1:20,2:22:17.26:17,0,123	1/1:25,0:23:2.84:14,3,0	1/1:18,0:18:11.36:55,11,0	./.	0/1:21,0:22:5.33:5,0,36	0/1:14,0:14:2.22:2,0,97	0/1:26,2:30:47.01:47,0,372	0/1:23,0:24:17.31:17,0,157	1/1:21,0:21:5.68:28,6,0	1/1:21,0:20:5.68:28,6,0	./.
chr10	70043133	.	GA	G	5194.29	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=16.356;DP=712;FS=1.033;HRun=7;HaplotypeScore=88.9975;InbreedingCoeff=0.9970;MQ=84.82;MQ0=0;MQRankSum=-1.964;QD=26.10;ReadPosRankSum=0.194;VQSLOD=5.1374;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,46:50:99:1194,117,0	0/0:17,0:17:51.14:0,51,616	0/0:20,0:20:51.14:0,51,603	0/0:23,0:23:45.01:0,45,524	1/1:1,21:22:66.15:673,66,0	0/0:27,0:27:75.24:0,75,943	0/0:22,0:22:57.18:0,57,717	1/1:4,35:39:99:1063,105,0	0/0:23,0:23:63.20:0,63,792	0/0:17,0:17:45.14:0,45,565	0/0:24,0:24:57.18:0,57,707	0/0:35,0:35:93.30:0,93,1165	0/0:25,0:25:72.20:0,72,878	0/0:24,0:24:69.20:0,69,843	0/0:31,0:31:87.26:0,87,1081	0/0:36,0:36:99:0,105,1321	1/1:2,25:27:69.16:704,69,0	1/1:0,10:10:30.07:306,30,0	0/0:17,0:17:48.15:0,48,591	0/0:32,0:32:75.20:0,75,898	0/0:25,0:25:63.19:0,63,779	0/0:34,0:34:99:0,102,1283	1/1:0,24:24:66.15:673,66,0	1/1:3,24:27:57.12:582,57,0	0/0:14,0:14:42.13:0,42,528	0/0:35,0:35:96.31:0,96,1208	0/0:27,0:26:72.23:0,72,904	0/0:5,0:5:15.05:0,15,189
chr10	70045908	.	CACAG	C	1131.64	PASS	AB=1.000;AC=19;AF=0.352;AN=54;BaseQRankSum=4.631;DP=675;FS=2.340;HRun=0;HaplotypeScore=134.7314;InbreedingCoeff=0.5644;MQ=72.24;MQ0=5;MQRankSum=-0.292;QD=4.27;ReadPosRankSum=2.690;VQSLOD=2.7086;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:14,0:14:9.03:0,9,207	0/0:26,0:22:6.02:0,6,83	0/0:27,0:24:2.99:0,3,23	0/1:12,0:26:0:0,0,0	0/0:35,0:33:54.19:0,54,1188	0/0:18,0:18:33.11:0,33,678	0/1:30,0:30:0:0,0,0	0/0:23,0:23:45.13:0,45,870	0/1:27,0:27:7.42:7,0,693	0/1:19,0:19:9.03:9,0,718	0/0:15,0:15:33.10:0,33,658	0/0:31,0:31:16.28:0,16,1238	0/0:26,0:26:48.16:0,48,893	0/0:26,0:26:45.15:0,45,993	0/0:38,0:38:81.27:0,81,1723	0/0:8,0:11:3.01:0,3,42	1/1:8,0:18:3:28,3,0	1/1:13,3:16:9.01:114,9,0	1/1:11,10:21:3.01:46,3,0	1/1:31,1:32:27.09:409,27,0	0/0:29,0:29:60.19:0,60,1283	0/0:21,0:21:33.11:0,33,591	0/0:37,0:37:51.17:0,51,867	0/1:24,0:24:35.80:36,0,400	1/1:12,8:20:20.33:299,20,0	1/1:13,11:24:14.96:221,15,0	1/1:7,0:7:9.03:134,9,0
chr10	70045970	.	CACAGAGAGAG	C	582.01	PASS	AB=0.922;AC=12;AF=0.214;AN=56;BaseQRankSum=4.250;DP=561;FS=11.979;HRun=0;HaplotypeScore=150.5847;InbreedingCoeff=0.5644;MQ=46.43;MQ0=28;MQRankSum=2.507;QD=3.75;ReadPosRankSum=1.962;VQSLOD=2.3133;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,1:27:11.91:93,12,0	0/1:6,0:6:0:0,0,0	0/0:29,0:13:38.77:0,39,310	0/0:35,0:18:35.07:0,35,340	1/1:19,0:18:21.45:177,21,0	0/0:24,0:24:56.86:0,57,745	0/0:20,0:18:38.96:0,39,325	0/0:32,0:31:66.83:0,67,507	0/0:15,0:15:41.93:0,42,462	0/0:15,0:14:36.03:0,36,352	0/0:14,0:13:11.19:0,11,514	0/0:26,0:25:42.37:0,42,513	0/0:23,0:23:47.80:0,48,473	0/1:11,0:11:12.87:13,0,296	0/0:17,0:16:44.92:0,45,469	0/0:26,0:26:71.88:0,72,1020	1/1:18,0:15:2.17:157,2,0	0/0:12,0:10:11.98:0,12,230	0/0:18,0:15:44.19:0,44,360	0/0:18,0:18:6.73:0,7,37	0/0:27,0:27:8.65:0,9,167	0/0:20,0:20:44.15:0,44,396	0/1:11,9:20:14.02:32,0,14	1/1:33,0:31:35.24:261,35,0	0/0:14,0:14:36.01:0,36,567	0/0:16,0:14:15.32:0,15,223	0/1:20,0:19:3.23:3,0,158	0/0:5,0:3:2.69:0,3,8
chr10	70046668	.	G	GT	6462.30	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-7.843;DP=698;FS=9.854;HRun=0;HaplotypeScore=65.8815;InbreedingCoeff=0.9883;MQ=83.55;MQ0=0;MQRankSum=-4.449;QD=44.57;ReadPosRankSum=2.137;VQSLOD=4.8593;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.21:0,63,881	0/0:3,0:3:9.03:0,9,126	0/0:25,0:25:72.18:0,72,950	0/0:15,0:15:38.80:0,39,509	0/0:30,0:30:90.29:0,90,1241	0/0:26,0:26:78.25:0,78,1074	0/0:24,0:24:72.24:0,72,1007	0/0:48,0:48:99:0,141,1888	0/0:36,0:36:99:0,108,1510	0/0:46,0:46:99:0,135,1827	0/0:16,0:16:48.16:0,48,671	0/0:32,0:32:96.31:0,96,1327	0/0:25,0:25:75.24:0,75,1032	0/0:26,0:26:75.24:0,75,1031	0/0:28,0:28:75.25:0,75,1049	0/0:29,0:29:87.28:0,87,1201	0/0:23,0:23:66.22:0,66,923	0/0:19,0:19:51.10:0,51,656	1/1:1,19:20:60.16:909,60,0	1/1:0,32:32:90.25:1409,90,0	1/1:1,27:28:72.25:1151,72,0	0/0:23,0:23:66.22:0,66,923	0/0:23,0:23:69.21:0,69,945	0/0:16,0:16:48.16:0,48,667	0/0:19,0:19:57.19:0,57,797	1/1:0,24:24:72.23:1125,72,0	1/1:0,26:26:72.25:1149,72,0	1/1:0,15:15:45.15:719,45,0
chr10	70049787	.	G	GT	4722.12	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-11.315;DP=754;FS=0.000;HRun=8;HaplotypeScore=72.4365;InbreedingCoeff=0.9930;MQ=77.85;MQ0=0;MQRankSum=1.011;QD=27.94;ReadPosRankSum=-1.749;VQSLOD=4.5703;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,105,961	0/0:15,0:15:42.02:0,42,384	0/0:22,0:22:41.99:0,42,376	0/0:17,0:17:18.45:0,18,227	0/0:34,0:34:96.04:0,96,879	0/0:21,0:21:57.02:0,57,521	0/0:25,0:25:66:0,66,598	0/0:28,0:28:69:0,69,624	0/0:22,0:23:65.25:0,65,584	0/0:36,0:36:74.39:0,74,854	0/0:30,0:30:78.04:0,78,711	0/0:27,0:28:74.82:0,75,668	0/0:29,0:29:72.02:0,72,659	0/0:39,0:39:99:0,114,1043	0/0:32,0:32:87.04:0,87,796	0/0:29,0:29:81.03:0,81,737	0/0:23,0:23:57.02:0,57,522	1/1:2,14:16:45:500,45,0	1/1:4,21:25:66.13:736,66,0	1/1:5,23:28:74.89:836,75,0	1/1:3,26:29:63.19:727,63,0	0/0:26,0:26:66.02:0,66,604	0/0:29,0:29:78.01:0,78,709	0/0:28,0:28:74.99:0,75,678	0/0:28,0:28:63.01:0,63,572	1/1:2,30:32:90.23:1024,90,0	1/1:5,28:34:66.20:761,66,0	1/1:1,4:5:12.04:138,12,0
chr10	70050139	.	C	CA	773.25	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.135;DP=765;FS=0.000;HRun=6;HaplotypeScore=77.4866;InbreedingCoeff=0.9981;MQ=82.37;MQ0=0;MQRankSum=-2.956;QD=28.64;ReadPosRankSum=-3.273;VQSLOD=2.7674;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1193	0/0:9,0:9:27.06:0,27,275	0/0:21,0:21:52.91:0,53,515	0/0:21,0:21:30.52:0,31,454	0/0:33,0:33:90.18:0,90,911	0/0:29,0:29:78.17:0,78,795	0/0:20,0:20:57.13:0,57,582	1/1:4,23:27:69.22:868,69,0	0/0:38,0:38:99:0,105,1063	0/0:35,0:35:99:0,102,1040	0/0:30,0:30:78.17:0,78,795	0/0:26,0:26:66.14:0,66,673	0/0:32,0:32:84.19:0,84,857	0/0:21,0:21:57.11:0,57,574	0/0:32,0:32:78.17:0,78,796	0/0:36,0:36:87.18:0,87,887	0/0:30,0:30:78.17:0,78,795	0/0:15,0:15:39.09:0,39,398	0/0:19,0:19:45.09:0,45,459	0/0:34,0:34:99:0,99,1010	0/0:48,0:48:99:0,129,1302	0/0:23,0:23:63.14:0,63,643	0/0:26,0:25:75.17:0,75,765	0/0:17,0:17:39.08:0,39,398	0/0:30,0:30:81.13:0,81,810	0/0:29,0:29:72.16:0,72,734	0/0:33,0:33:81.14:0,81,816	0/0:11,0:11:33.05:0,33,328
chr10	70050741	.	GATTCTGTTTAAGAACAT	G	10124.57	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=13.773;DP=654;FS=1.492;HRun=0;HaplotypeScore=293.0025;InbreedingCoeff=0.9745;MQ=87.62;MQ0=0;MQRankSum=-11.735;QD=98.30;ReadPosRankSum=3.203;VQSLOD=3.8665;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:33.11:0,33,2555	0/0:9,0:9:27.09:0,27,2137	0/0:22,0:22:57.19:0,57,3290	0/0:27,0:27:63.16:0,63,3838	0/0:28,0:28:84.29:0,84,6123	0/0:36,0:36:99:0,105,8493	0/0:21,0:21:57.20:0,57,4218	0/0:29,0:29:78.27:0,78,5533	0/0:26,0:26:75.24:0,75,5088	0/0:28,0:28:78.27:0,78,6053	0/0:25,0:25:75.26:0,75,5824	0/0:23,0:23:63.22:0,63,3954	0/0:25,0:25:72.25:0,72,5496	0/0:19,0:19:57.20:0,57,4389	0/0:28,0:28:81.28:0,81,6231	0/0:29,0:29:87.30:0,87,6656	0/0:21,0:21:60.21:0,60,4721	0/0:23,0:23:63.16:0,63,4352	1/1:2,9:11:27.07:891,27,0	1/1:5,20:25:60.21:2900,60,0	1/1:5,2:7:6.02:205,6,0	0/0:38,0:38:99:0,111,8271	0/0:30,0:30:90.31:0,90,7232	0/0:22,0:22:63.20:0,63,4661	0/0:29,0:29:87.30:0,87,6281	1/1:5,23:28:69.22:3174,69,0	1/1:8,24:32:60.21:2955,60,0	./.
chr10	70056373	.	TG	T	11633.08	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=11.951;DP=820;FS=2.030;HRun=1;HaplotypeScore=79.7864;InbreedingCoeff=0.9857;MQ=55.97;MQ0=38;MQRankSum=2.833;QD=30.53;ReadPosRankSum=-1.126;VQSLOD=4.3140;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,46:46:93.31:1300,93,0	1/1:1,9:9:24.08:334,24,0	0/0:16,0:9:6.38:0,6,298	0/0:16,0:13:36.59:0,37,560	1/1:0,14:13:30.10:419,30,0	0/0:22,0:18:45.14:0,45,696	0/0:35,0:32:81.27:0,81,1285	1/1:0,30:25:69.22:948,69,0	0/0:32,0:31:75:0,75,1199	0/0:36,0:35:99:0,105,1667	0/0:16,0:15:39.13:0,39,622	0/0:56,0:51:99:0,123,1966	0/0:41,0:39:75.07:0,75,1199	0/0:39,0:37:99:0,105,1677	0/0:45,0:43:99:0,108,1703	0/0:38,0:33:90.29:0,90,1413	1/1:3,38:38:84.28:1175,84,0	1/1:0,28:28:54.18:755,54,0	1/1:7,12:13:33.11:457,33,0	1/1:1,16:14:42.14:587,42,0	1/1:3,51:50:99:1711,117,0	0/0:29,0:29:66.23:0,66,1055	1/1:1,21:18:51.17:712,51,0	1/1:2,39:39:78.26:1091,78,0	0/0:18,0:18:48.16:0,48,766	1/1:1,31:30:90.26:1221,90,0	1/1:0,18:17:45.15:629,45,0	1/1:0,8:8:21.07:293,21,0
chr10	70057335	.	A	AT	605.32	PASS	AC=22;AF=1.000;AN=22;DP=22;FS=0.000;HRun=0;HaplotypeScore=44.7351;InbreedingCoeff=-0.1110;MQ=28.51;MQ0=0;QD=30.27;VQSLOD=3.2504;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:8.82:76,9,0	./.	./.	./.	1/1:0,1:1:2.90:16,3,0	./.	./.	./.	./.	./.	./.	1/1:0,3:4:12.04:172,12,0	1/1:0,2:2:5.93:60,6,0	1/1:0,1:1:3.01:43,3,0	1/1:0,2:2:6.02:86,6,0	1/1:0,1:1:3.01:43,3,0	./.	1/1:0,3:3:8.92:102,9,0	./.	1/1:0,1:1:2.92:17,3,0	./.	./.	./.	./.	1/1:0,1:1:2.92:17,3,0	./.	1/1:0,1:0:3.01:44,3,0	./.
chr10	70057402	.	C	CAA	4264.86	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=0.193;DP=367;FS=17.630;HRun=8;HaplotypeScore=106.4268;InbreedingCoeff=0.9420;MQ=74.93;MQ0=2;MQRankSum=-3.657;QD=26.01;ReadPosRankSum=-5.207;VQSLOD=1.7495;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:28:66.02:890,66,0	1/1:2,1:3:3:28,3,0	0/0:19,0:19:53.74:0,54,555	0/0:10,0:8:24.06:0,24,257	1/1:0,8:9:17.92:201,18,0	0/0:15,0:15:33.05:0,33,366	0/0:19,0:19:51.10:0,51,559	1/1:6,16:25:54.09:739,54,0	0/0:18,0:18:54.15:0,54,601	0/0:10,0:10:24.06:0,24,267	0/0:4,0:4:12.01:0,12,124	0/0:21,0:21:45.06:0,45,501	0/0:16,0:16:39.08:0,39,434	0/0:18,0:18:42.03:0,42,447	0/0:14,0:14:27.03:0,27,300	0/0:16,0:16:48.11:0,48,523	1/1:2,11:13:30.05:447,30,0	1/1:1,2:4:9.03:124,9,0	1/1:4,0:14:35.94:321,36,0	1/1:1,0:4:8.94:69,9,0	1/1:3,0:7:14.95:126,15,0	0/0:6,0:6:12.02:0,12,133	1/1:0,7:7:15.02:211,15,0	1/1:1,7:9:17.93:201,18,0	0/0:17,0:17:42.09:0,42,466	1/1:2,1:13:33.06:334,33,0	1/1:3,1:18:45.01:432,45,0	1/1:0,0:5:15.02:143,15,0
chr10	70057831	.	CTA	C	392.63	PASS	AB=0.993;AC=23;AF=0.479;AN=48;BaseQRankSum=5.627;DP=369;FS=5.248;HRun=0;HaplotypeScore=62.4060;InbreedingCoeff=-0.0935;MQ=50.45;MQ0=35;MQRankSum=0.086;QD=1.95;ReadPosRankSum=-1.509;VQSLOD=1.0603;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:2.88:26,3,0	1/1:2,0:2:5.90:37,6,0	0/0:47,0:8:2.42:0,2,93	0/0:65,0:12:7.22:0,7,58	./.	0/1:23,1:20:34.34:34,0,91	0/1:12,0:12:52.26:52,0,68	./.	0/0:10,8:18:14.35:0,14,107	0/1:24,1:25:74.12:74,0,293	0/0:7,0:7:14.98:0,15,124	0/1:11,0:10:11.28:11,0,44	0/1:28,0:27:27.70:28,0,121	0/1:15,0:14:21:21,0,113	0/1:17,0:17:45.92:46,0,152	0/1:9,0:9:14.32:26,0,14	0/1:7,0:5:5.28:23,0,5	1/1:3,0:1:2.97:20,3,0	./.	./.	0/1:6,0:2:0:0,0,0	0/0:15,0:15:6.90:0,7,159	0/0:3,0:2:0:0,0,0	1/1:3,0:2:2.04:6,2,0	0/1:26,0:25:43.99:44,0,174	1/1:5,0:4:7.31:64,7,0	1/1:3,0:2:2.96:19,3,0	0/0:3,0:2:2.99:0,3,24
chr10	70057856	.	CCT	C	234.97	PASS	AB=0.919;AC=18;AF=0.375;AN=48;BaseQRankSum=3.636;DP=418;FS=3.156;HRun=0;HaplotypeScore=77.6067;InbreedingCoeff=0.0725;MQ=48.83;MQ0=28;MQRankSum=1.961;QD=0.96;ReadPosRankSum=-0.354;VQSLOD=1.4242;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:7:5.74:49,6,0	1/1:2,0:2:3.01:33,3,0	./.	0/1:66,0:13:0:0,0,0	1/1:6,0:6:5.68:63,6,0	0/0:24,0:22:33.10:0,33,463	0/1:16,2:18:22.11:22,0,233	./.	0/1:19,1:20:6.29:6,0,294	0/1:23,3:26:53.29:53,0,228	0/0:10,0:10:14.99:0,15,161	0/0:16,0:17:24.02:0,24,296	0/1:21,1:22:7.85:8,0,396	0/1:16,1:17:21.33:21,0,118	0/0:20,0:20:19.73:0,20,497	0/0:12,0:13:11.46:0,11,132	0/1:8,0:8:11.40:22,0,11	1/1:3,0:3:2.34:32,2,0	0/0:1,0:1:2.88:0,3,15	0/0:3,0:3:2.37:0,2,8	0/1:10,0:6:36.03:55,0,36	0/0:20,0:20:27.06:0,27,382	0/1:2,0:6:0:0,0,0	./.	0/1:31,1:32:9.46:9,0,489	0/0:8,0:7:11.04:0,11,88	0/0:3,0:3:4.20:0,4,22	./.
chr10	70058416	.	GT	G	9267.08	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=18.783;DP=606;FS=4.065;HRun=6;HaplotypeScore=89.1381;InbreedingCoeff=0.9951;MQ=74.75;MQ0=0;MQRankSum=-2.103;QD=29.05;ReadPosRankSum=-1.248;VQSLOD=4.7853;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:60.15:642,60,0	1/1:0,11:11:33.08:355,33,0	0/0:15,0:15:32.11:0,32,371	0/0:9,0:9:15.04:0,15,184	1/1:3,46:49:99:1449,135,0	0/0:37,0:37:99:0,108,1421	0/0:8,0:8:24.08:0,24,316	1/1:3,35:38:99:1125,105,0	0/0:22,0:22:63.20:0,63,816	0/0:31,0:31:84.27:0,84,1092	0/0:23,0:23:63.20:0,63,815	0/0:18,0:18:48.16:0,48,631	0/0:15,0:15:42.14:0,42,552	0/0:14,0:14:39.12:0,39,500	0/0:28,0:28:84.27:0,84,1105	0/0:21,0:20:60.20:0,60,788	1/1:1,17:18:51.13:548,51,0	1/1:1,10:11:27.07:290,27,0	1/1:0,19:19:57.10:597,57,0	1/1:3,18:21:54.13:580,54,0	1/1:0,21:21:57.14:613,57,0	0/0:23,0:23:69.20:0,69,891	1/1:1,12:13:36.09:387,36,0	1/1:0,19:19:54.14:580,54,0	0/0:23,0:23:63.20:0,63,829	1/1:2,21:23:63.12:654,63,0	1/1:4,41:44:99:1286,120,0	1/1:2,5:7:15.04:161,15,0
chr10	70058535	.	TAGAG	T	140.93	PASS	AB=1.000;AC=9;AF=0.173;AN=52;BaseQRankSum=2.310;DP=523;FS=5.821;HRun=0;HaplotypeScore=104.9890;InbreedingCoeff=0.2929;MQ=74.14;MQ0=17;MQRankSum=0.714;QD=1.50;ReadPosRankSum=0.365;VQSLOD=1.6401;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:5.81:0,6,81	0/1:8,0:8:29.79:30,0,41	0/0:30,0:15:0:0,0,0	./.	0/0:20,0:20:9.96:0,10,97	0/0:20,0:20:20.90:0,21,373	0/0:11,0:11:6.01:0,6,95	0/0:25,0:25:11.98:0,12,128	0/0:19,0:20:17.75:0,18,225	0/0:14,0:13:6:0,6,66	./.	1/1:13,5:17:3.01:46,3,0	0/0:20,0:20:3.91:0,4,37	0/0:12,0:16:2.74:0,3,12	0/0:18,0:18:15.50:0,16,304	0/0:22,0:22:20:0,20,325	0/0:13,0:12:8.95:0,9,96	0/1:7,0:7:19.25:19,0,52	0/0:17,0:17:6.02:0,6,70	0/1:27,0:25:0.26:0,0,0	0/0:19,0:18:5.81:0,6,84	1/1:15,1:19:12:159,12,0	0/0:21,0:21:5.99:0,6,48	1/1:15,0:14:0.47:1,0,0	0/0:12,0:11:3.01:0,3,66	0/0:14,0:14:11.57:0,12,77	0/0:24,0:23:2.11:0,2,15	0/0:15,0:15:8.94:0,9,65
chr10	70058580	.	A	AGTGTGT	2299.47	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=9.098;DP=529;FS=3.116;HRun=0;HaplotypeScore=131.8905;InbreedingCoeff=0.6191;MQ=53.53;MQ0=16;MQRankSum=-8.499;QD=12.70;ReadPosRankSum=-1.201;VQSLOD=2.9571;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:40.20:0,40,451	1/1:13,0:12:10.18:238,10,0	0/0:11,0:5:12.04:0,12,249	0/0:16,0:7:18.02:0,18,264	0/0:23,0:22:24.60:0,25,453	0/0:28,0:27:53.76:0,54,1141	0/0:15,0:15:27.31:0,27,597	0/1:34,0:33:62.91:63,0,241	0/0:26,0:26:66.66:0,67,1311	0/0:14,0:13:34.64:0,35,662	0/0:12,0:12:21.07:0,21,496	0/0:18,0:17:33.09:0,33,690	0/0:20,0:19:44.52:0,45,663	0/0:13,0:13:24.02:0,24,365	0/0:25,0:25:67.11:0,67,1556	0/0:24,0:23:59.90:0,60,1322	0/0:20,0:19:38.75:0,39,432	0/1:9,0:8:41.85:283,0,42	1/1:23,0:23:8.61:778,9,0	1/1:19,1:19:8.57:128,9,0	0/1:17,0:15:9.54:10,0,102	0/0:19,0:19:21.68:0,22,732	0/0:23,0:23:8.60:0,9,119	0/1:16,0:14:0.01:0,0,0	0/0:22,0:22:54.16:0,54,1210	1/1:6,10:19:36.20:677,36,0	1/1:22,0:21:1.03:63,1,0	1/1:8,0:7:18.31:235,18,0
chr10	70058582	.	A	AGTGTGTGT	4680.63	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=9.113;DP=524;FS=15.091;HRun=0;HaplotypeScore=157.3909;InbreedingCoeff=0.6632;MQ=53.68;MQ0=15;MQRankSum=-9.806;QD=24.51;ReadPosRankSum=-2.831;VQSLOD=2.7636;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:33.86:0,34,427	1/1:13,0:12:20.85:434,21,0	0/0:11,0:5:12.03:0,12,280	0/0:16,0:7:18.02:0,18,300	0/1:22,0:21:53.52:54,0,354	0/0:26,0:25:53.90:0,54,1285	0/0:14,0:14:26.93:0,27,709	0/1:35,0:34:82.22:529,0,82	0/0:26,0:26:62.89:0,63,1477	0/0:13,0:12:33.98:0,34,780	0/0:12,0:12:24.07:0,24,632	0/0:17,0:16:32.69:0,33,880	0/0:18,0:17:27.09:0,27,632	0/0:13,0:13:15.04:0,15,353	0/0:24,0:24:66.08:0,66,1812	0/0:25,0:24:58.70:0,59,1417	0/0:19,0:18:23.93:0,24,325	0/1:10,0:9:0.53:359,0,1	1/1:24,0:24:18.56:1266,19,0	1/1:21,0:20:6.30:128,6,0	0/0:16,0:14:1.48:0,1,59	0/0:18,0:18:17.65:0,18,906	0/0:23,0:23:7.40:0,7,50	0/1:15,0:14:0.01:0,0,0	0/0:22,0:22:51.18:0,51,1449	1/1:19,0:19:50.49:1245,50,0	1/1:4,17:23:6.91:186,7,0	1/1:8,0:7:21.07:480,21,0
chr10	70058584	.	A	AGT	1708.59	PASS	AB=0.943;AC=22;AF=0.393;AN=56;BaseQRankSum=12.024;DP=504;FS=7.066;HRun=0;HaplotypeScore=98.9345;InbreedingCoeff=0.4091;MQ=54.33;MQ0=15;MQRankSum=-1.642;QD=6.26;ReadPosRankSum=-1.085;VQSLOD=2.0547;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:40.47:320,40,0	1/1:13,0:12:13.91:77,14,0	0/0:12,0:6:10.38:0,10,90	0/0:16,0:7:3.99:0,4,64	1/1:21,0:20:18.77:204,19,0	0/0:27,0:26:50.79:0,51,459	0/0:14,0:14:22.23:0,22,220	0/1:34,0:33:45.96:365,0,46	0/0:24,0:24:53.92:0,54,484	0/0:13,0:12:30.17:0,30,266	0/0:10,0:10:23.96:0,24,198	0/0:16,0:15:32.97:0,33,277	0/1:15,0:14:17.47:17,0,165	0/0:10,0:10:17.98:0,18,150	0/0:24,0:24:62.99:0,63,610	0/0:25,0:24:32.39:0,32,440	1/1:19,0:18:12.92:186,13,0	0/1:9,0:8:14.29:82,0,14	0/1:25,0:25:51.04:279,0,51	1/1:22,0:21:8.89:62,9,0	0/1:14,0:12:6.21:6,0,15	0/0:20,0:20:37.45:0,37,297	0/1:4,17:23:0.08:0,0,0	1/1:16,0:15:1.56:5,2,0	0/0:20,0:20:50.94:0,51,431	0/1:16,0:16:9.72:192,0,10	1/1:19,0:19:5.32:50,5,0	0/1:8,0:7:3.17:45,0,3
chr10	70058586	.	A	AGTGTGT	6629.21	PASS	AB=0.567;AC=25;AF=0.446;AN=56;BaseQRankSum=10.454;DP=512;FS=47.384;HRun=0;HaplotypeScore=137.0320;InbreedingCoeff=0.8981;MQ=53.97;MQ0=13;MQRankSum=-7.489;QD=25.50;ReadPosRankSum=-3.533;VQSLOD=2.2437;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:40.44:318,40,0	1/1:13,0:12:20.69:322,21,0	0/0:12,0:6:14.88:0,15,238	0/0:16,0:7:17.98:0,18,247	1/1:22,0:21:7.45:216,7,0	0/0:23,0:23:48.15:0,48,1032	0/0:13,0:13:27.08:0,27,575	1/1:33,0:32:81.28:1688,81,0	0/0:20,0:20:54.14:0,54,1207	0/0:13,0:12:27.09:0,27,618	0/0:10,0:10:24.08:0,24,547	0/0:16,0:15:32.96:0,33,738	0/0:14,0:13:27.07:0,27,569	0/0:10,0:10:18.06:0,18,380	0/0:23,0:23:60.21:0,60,1377	0/0:21,0:20:44.75:0,45,1016	1/1:19,0:18:17.40:380,17,0	1/1:10,0:9:19.31:352,19,0	1/1:28,0:28:64.64:1329,65,0	1/1:24,0:24:15.11:223,15,0	1/1:9,0:16:3.06:18,3,0	0/0:21,0:21:45.10:0,45,844	0/0:21,0:21:0.08:0,0,0	0/1:4,11:16:0:0,0,0	0/0:19,0:19:51.18:0,51,1155	1/1:23,0:23:57.18:1180,57,0	1/1:22,0:22:9.03:169,9,0	1/1:12,0:11:24.06:435,24,0
chr10	70058587	.	G	GTGTGTGTGTGTG	8086.35	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=1.729;DP=508;FS=59.653;HRun=0;HaplotypeScore=168.6825;InbreedingCoeff=0.7604;MQ=54.36;MQ0=11;MQRankSum=-10.139;QD=37.26;ReadPosRankSum=-6.094;VQSLOD=0.9843;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:3.77:4,0,308	1/1:13,0:12:20.60:544,21,0	0/0:12,0:6:14.58:0,15,330	0/0:16,0:7:18.49:0,18,337	0/0:22,0:21:6.98:0,7,386	0/0:22,0:22:48.15:0,48,1606	0/0:13,0:13:27.08:0,27,915	1/1:32,0:31:81.27:1456,81,0	0/0:20,0:20:54.13:0,54,1892	0/0:11,0:11:27.09:0,27,995	0/0:10,0:10:24.08:0,24,854	0/0:17,0:16:33.07:0,33,1195	0/0:13,0:12:27.07:0,27,861	0/0:10,0:10:18.53:0,19,557	0/0:24,0:24:60.21:0,60,2190	0/0:21,0:20:44.49:0,44,1619	0/1:18,0:17:99:171,0,171	1/1:9,0:8:18.06:655,18,0	1/1:15,12:29:38.78:2060,39,0	1/1:25,0:25:13.94:385,14,0	1/1:17,0:15:0.56:1,1,0	0/0:22,0:22:45.10:0,45,1360	0/0:22,0:22:0.94:0,1,2	0/0:17,0:16:0.47:0,0,1	0/0:19,0:19:51.18:0,51,1878	1/1:23,0:23:57.18:1825,57,0	1/1:22,0:22:9.03:260,9,0	1/1:11,0:11:24.08:726,24,0
chr10	70060266	.	TGAAGGGGGCC	T	1173	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=6.360;DP=486;FS=43.808;HRun=0;HaplotypeScore=157.2996;InbreedingCoeff=0.8775;MQ=73.75;MQ0=0;MQRankSum=-5.870;QD=43.44;ReadPosRankSum=1.281;VQSLOD=1.5263;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,3:5:12:327,12,0	0/0:12,0:12:33.11:0,33,1753	0/0:20,0:20:60.19:0,60,2769	0/0:17,0:17:50.38:0,50,2208	1/1:0,6:6:12.02:189,12,0	0/0:20,0:20:60.21:0,60,3213	0/0:30,0:30:90.31:0,90,4708	1/1:1,0:1:3.01:52,3,0	0/0:19,0:19:57.20:0,57,2978	0/0:26,0:26:78.27:0,78,4261	0/0:17,0:17:51.18:0,51,2498	0/0:17,0:17:51.18:0,51,2576	0/0:25,0:25:72.25:0,72,3673	0/0:27,0:27:81.28:0,81,4327	0/0:23,0:23:69.24:0,69,3586	0/0:28,0:28:84.29:0,84,4393	1/1:2,4:6:15:429,15,0	1/1:1,1:2:3.01:103,3,0	0/0:24,0:24:72.25:0,72,3701	0/0:26,0:26:75.26:0,75,3893	0/0:30,0:30:90.31:0,90,4746	0/0:22,0:22:60.19:0,60,2945	1/1:0,4:4:5.98:122,6,0	1/1:1,2:3:6.45:122,6,0	0/0:18,0:18:51.17:0,51,2657	0/0:25,0:24:72.25:0,72,3905	0/0:26,0:25:78.27:0,78,4211	0/0:7,0:7:21.07:0,21,1147
chr10	70060279	.	GTTCCA	G	389.21	PASS	AB=0.500;AC=11;AF=0.204;AN=54;BaseQRankSum=5.672;DP=488;FS=24.098;HRun=0;HaplotypeScore=112.8718;InbreedingCoeff=0.7302;MQ=73.75;MQ0=0;MQRankSum=-5.273;QD=22.89;ReadPosRankSum=3.646;VQSLOD=1.3710;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:9.03:149,9,0	0/0:12,0:12:36.12:0,36,1192	0/0:20,0:20:58.75:0,59,1604	0/0:12,0:12:33:0,33,903	0/1:0,4:4:24.70:37,0,25	0/0:21,0:21:60.12:0,60,1710	0/0:34,0:34:99:0,102,3201	./.	0/0:20,0:20:60.21:0,60,1996	0/0:32,0:32:96.33:0,96,3175	0/0:16,0:16:48.13:0,48,1518	0/0:19,0:19:57.20:0,57,1863	0/0:24,0:24:72.25:0,72,2393	0/0:31,0:31:93.32:0,93,3032	0/0:25,0:25:75.20:0,75,2246	0/0:28,0:28:84.29:0,84,2773	1/1:0,4:4:12.04:201,12,0	1/1:0,1:1:3.01:51,3,0	0/0:21,0:21:63.22:0,63,2081	0/0:25,0:25:75.24:0,75,2293	0/0:31,0:31:93.32:0,93,3081	0/0:17,0:17:51.17:0,51,1469	1/1:2,1:3:3.01:49,3,0	1/1:0,2:2:3.01:48,3,0	0/0:16,0:16:48.16:0,48,1516	0/0:32,0:31:93.32:0,93,3041	0/0:27,0:26:81.28:0,81,2598	0/0:8,0:8:24.08:0,24,800
chr10	70060285	.	GCCCCCAGGAAGCAGCA	G	1408.48	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=6.598;DP=499;FS=35.087;HRun=0;HaplotypeScore=230.6523;InbreedingCoeff=0.8732;MQ=71.09;MQ0=0;MQRankSum=-6.048;QD=93.90;ReadPosRankSum=2.588;VQSLOD=2.0667;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:9.03:378,9,0	0/0:12,0:12:36.08:0,36,2644	0/0:20,0:20:57.19:0,57,2862	0/0:9,0:9:24.08:0,24,1084	1/1:0,4:4:12.04:280,12,0	0/0:18,0:18:51.18:0,51,3594	0/0:33,0:33:99:0,99,7467	./.	0/0:23,0:23:69.24:0,69,5353	0/0:34,0:34:99:0,102,7839	0/0:19,0:19:57.20:0,57,4000	0/0:20,0:20:60.16:0,60,4400	0/0:26,0:26:78.27:0,78,5666	0/0:32,0:32:96.33:0,96,6718	0/0:23,0:23:69.24:0,69,5217	0/0:33,0:33:99:0,99,6959	1/1:0,4:4:12.04:506,12,0	1/1:0,1:1:3.01:128,3,0	0/0:23,0:23:69.23:0,69,4449	0/0:24,0:24:72.25:0,72,5533	0/0:31,0:31:93.32:0,93,7101	0/0:16,0:16:48.16:0,48,3707	1/1:0,1:1:3.01:126,3,0	1/1:0,2:2:6.01:150,6,0	0/0:16,0:16:48.16:0,48,3756	0/0:34,0:33:93.31:0,93,6975	0/0:30,0:29:87.28:0,87,6699	0/0:8,0:8:24.08:0,24,1788
chr10	70060677	.	GAA	G	1363.05	PASS	AB=0.647;AC=12;AF=0.214;AN=56;BaseQRankSum=0.754;DP=563;FS=0.000;HRun=15;HaplotypeScore=76.7378;InbreedingCoeff=0.8061;MQ=53.26;MQ0=13;MQRankSum=0.797;QD=10.90;ReadPosRankSum=4.275;VQSLOD=2.5362;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:45:78.64:0,79,751	1/1:3,9:12:17.95:159,18,0	0/0:11,0:6:11.90:0,12,120	0/0:6,0:3:5.99:0,6,58	0/0:18,0:29:50.31:0,50,512	0/0:24,0:27:54.11:0,54,661	0/0:13,0:14:29.97:0,30,335	0/0:22,0:26:47.99:0,48,503	0/0:8,0:8:21.02:0,21,242	0/0:21,0:20:29.96:0,30,342	0/0:16,0:18:32.88:0,33,330	0/0:16,0:16:33.07:0,33,422	0/0:16,0:19:39.07:0,39,492	0/0:17,0:19:44.54:0,45,521	0/0:18,0:20:47.64:0,48,606	0/0:18,0:20:38.59:0,39,454	0/0:18,0:42:66.06:0,66,656	0/0:13,0:21:34.87:0,35,371	1/1:3,9:15:14.36:206,14,0	1/1:8,15:22:32.56:281,33,0	1/1:3,11:14:20.95:185,21,0	0/0:12,0:17:36.07:0,36,441	0/0:8,0:18:30.22:0,30,319	0/0:6,0:14:21.04:0,21,224	0/0:18,0:18:45.13:0,45,579	0/1:12,12:24:21.61:232,0,22	0/1:9,12:21:1:294,0,1	1/1:5,10:10:21:185,21,0
chr10	70062076	.	A	ATC	1330.83	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.815;DP=737;FS=2.546;HRun=0;HaplotypeScore=84.1655;InbreedingCoeff=0.9954;MQ=91.06;MQ0=0;MQRankSum=-2.550;QD=45.89;ReadPosRankSum=-4.547;VQSLOD=3.5563;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,120,1640	0/0:10,0:10:30.10:0,30,412	0/0:26,0:26:72.13:0,72,899	0/0:32,0:32:66.22:0,66,902	0/0:22,0:22:54.14:0,54,705	0/0:20,0:20:54.18:0,54,740	0/0:31,0:31:81.25:0,81,1095	1/1:2,27:29:81.28:1426,81,0	0/0:31,0:31:93.28:0,93,1259	0/0:25,0:25:72.24:0,72,981	0/0:25,0:25:66.22:0,66,901	0/0:27,0:27:78.26:0,78,1069	0/0:25,0:25:75.25:0,75,1028	0/0:26,0:26:72.24:0,72,987	0/0:42,0:42:99:0,123,1688	0/0:33,0:33:96.30:0,96,1301	0/0:33,0:33:93.31:0,93,1274	0/0:18,0:18:51.17:0,51,701	0/0:18,0:18:51.17:0,51,701	0/0:15,0:15:39.13:0,39,535	0/0:39,0:39:99:0,111,1521	0/0:20,0:20:60.20:0,60,824	0/0:23,0:23:63.21:0,63,863	0/0:31,0:31:90.28:0,90,1217	0/0:25,0:25:72.24:0,72,987	0/0:33,0:33:96.31:0,96,1305	0/0:25,0:25:75.25:0,75,1028	0/0:7,0:7:21.07:0,21,288
chr10	70062653	.	ATTCCG	A	7929.63	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.116;DP=675;FS=7.989;HRun=0;HaplotypeScore=128.0572;InbreedingCoeff=0.9942;MQ=86.30;MQ0=0;MQRankSum=-11.499;QD=44.30;ReadPosRankSum=1.846;VQSLOD=4.6870;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:34:66.23:1405,66,0	0/0:12,0:12:36.04:0,36,888	0/0:29,0:29:83.41:0,83,2079	0/0:25,0:24:63.20:0,63,1733	1/1:0,25:25:44.04:925,44,0	0/0:19,0:18:51.16:0,51,1476	0/0:23,0:23:69.24:0,69,2156	1/1:3,34:37:99:1959,102,0	0/0:20,0:20:60.16:0,60,1795	0/0:29,0:29:81.27:0,81,2457	0/0:24,0:24:72.24:0,72,2177	0/0:30,0:30:84.29:0,84,2576	0/0:25,0:25:72.19:0,72,2153	0/0:27,0:27:81.28:0,81,2476	0/0:20,0:20:60.19:0,60,1710	0/0:32,0:31:90.30:0,90,2671	1/1:1,27:28:48.16:1022,48,0	1/1:0,12:12:27.56:575,28,0	0/0:17,0:17:51.04:0,51,1399	0/0:29,0:29:84.29:0,84,2575	0/0:29,0:29:87.30:0,87,2580	0/0:11,0:11:33.10:0,33,947	1/1:2,21:23:39.13:829,39,0	1/1:0,20:20:57.20:1215,57,0	0/0:26,0:26:75.26:0,75,2347	0/0:37,0:37:99:0,105,3074	0/0:24,0:24:60.19:0,60,1735	0/0:8,0:8:12.04:0,12,375
chr10	70063755	.	T	TAC	578.98	PASS	AB=1.000;AC=26;AF=0.619;AN=42;BaseQRankSum=0.258;DP=588;FS=2.835;HRun=0;HaplotypeScore=91.8670;InbreedingCoeff=0.2297;MQ=61.97;MQ0=21;MQRankSum=-0.213;QD=1.57;ReadPosRankSum=-0.258;VQSLOD=1.9062;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:37:6.01:69,6,0	./.	./.	./.	1/1:13,0:13:5.36:33,5,0	0/1:30,0:29:9.70:37,0,10	0/0:26,0:26:3.76:0,4,33	0/1:22,0:22:0:0,0,0	0/1:18,0:19:8.10:17,0,8	1/1:22,0:20:6.94:55,7,0	0/0:8,0:8:5.22:0,5,38	0/1:28,0:28:36.52:37,0,45	1/1:15,0:14:0.94:3,1,0	0/0:20,0:20:11.36:0,11,71	0/1:24,0:23:0:0,0,0	0/1:32,0:31:16.95:17,0,26	1/1:27,0:26:9.90:100,10,0	1/1:19,0:19:21.73:189,22,0	./.	1/1:9,0:9:2.37:8,2,0	./.	./.	1/1:14,0:14:6.02:86,6,0	1/1:22,9:35:3.01:44,3,0	1/1:21,0:21:2.61:12,3,0	./.	0/0:17,0:19:5.68:0,6,28	0/0:14,0:12:0:0,0,0
chr10	70064007	.	A	AG	13057.05	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-16.830;DP=631;FS=3.908;HRun=1;HaplotypeScore=56.4106;InbreedingCoeff=0.9854;MQ=79.25;MQ0=0;MQRankSum=-1.940;QD=40.68;ReadPosRankSum=-0.859;VQSLOD=5.0179;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:34:78.26:1169,78,0	1/1:0,8:8:24.08:360,24,0	0/0:15,0:15:39.08:0,39,456	0/0:15,0:15:42.12:0,42,516	1/1:0,20:20:60.20:897,60,0	0/0:36,0:36:99:0,105,1363	0/0:18,0:18:45.10:0,45,552	1/1:0,34:34:96.28:1375,96,0	0/0:20,0:20:60.20:0,60,779	0/0:28,0:28:81.26:0,81,1052	0/0:23,0:23:69.22:0,69,896	0/0:28,0:28:84.27:0,84,1090	0/0:16,0:16:42.14:0,42,545	0/0:18,0:18:54.18:0,54,699	0/0:27,0:27:78.24:0,78,998	0/0:25,0:25:75.22:0,75,946	1/1:0,38:38:99:1619,108,0	1/1:0,21:21:57.19:854,57,0	1/1:3,24:27:72.21:1035,72,0	1/1:1,26:27:75.25:1122,75,0	1/1:2,36:38:99:1484,99,0	0/0:15,0:15:45.15:0,45,584	1/1:0,16:16:48.16:719,48,0	1/1:0,15:15:42.14:629,42,0	0/0:26,0:26:78.25:0,78,1013	1/1:0,18:17:51.17:763,51,0	1/1:0,21:20:63.21:942,63,0	1/1:0,4:4:6.02:90,6,0
chr10	70064158	.	G	GAA	4076.67	PASS	AB=0.682;AC=15;AF=0.268;AN=56;BaseQRankSum=-2.790;DP=590;FS=5.268;HRun=10;HaplotypeScore=105.3829;InbreedingCoeff=0.9130;MQ=63.23;MQ0=10;MQRankSum=-0.052;QD=24.71;ReadPosRankSum=-5.297;VQSLOD=2.0557;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:75.11:0,75,756	1/1:3,7:10:26.58:358,27,0	0/0:32,0:17:5.58:0,6,158	0/0:20,0:12:18.69:0,19,156	0/0:21,0:21:47.41:0,47,462	0/0:15,0:15:39.07:0,39,396	0/0:17,0:17:41.78:0,42,408	0/1:16,1:30:3.12:186,0,3	0/0:14,0:14:36.04:0,36,356	0/0:23,0:23:49.29:0,49,553	0/0:18,0:18:44.92:0,45,457	0/0:23,0:24:44.52:0,45,555	0/0:13,0:13:35.25:0,35,325	0/0:17,0:17:31.17:0,31,383	0/0:32,0:32:84.15:0,84,840	0/0:26,0:26:61.42:0,61,689	0/0:27,0:27:74.65:0,75,719	0/0:25,0:25:60.11:0,60,610	1/1:7,17:24:68.20:802,68,0	1/1:3,18:23:53.63:718,54,0	1/1:1,13:15:32.60:454,33,0	0/0:12,0:12:33.06:0,33,333	0/0:10,0:10:21.03:0,21,213	0/0:18,0:18:42.08:0,42,427	0/0:24,0:24:69.14:0,69,701	1/1:8,23:32:69.15:948,69,0	1/1:5,15:23:38.02:493,38,0	1/1:4,1:4:11.96:118,12,0
chr10	70064176	.	CAA	C	3925.92	PASS	AB=0.870;AC=15;AF=0.268;AN=56;BaseQRankSum=7.525;DP=598;FS=4.519;HRun=11;HaplotypeScore=106.3921;InbreedingCoeff=0.9384;MQ=67.93;MQ0=5;MQRankSum=-3.181;QD=22.31;ReadPosRankSum=1.727;VQSLOD=3.2969;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:30:64.02:671,64,0	0/0:8,0:9:26.58:0,27,378	0/0:33,0:18:21.44:0,21,222	0/1:17,0:13:1.64:2,0,46	1/1:0,18:18:51.02:526,51,0	0/0:16,0:16:45.15:0,45,693	0/0:18,0:18:48.15:0,48,717	1/1:5,30:35:96.20:1010,96,0	0/0:16,0:16:45.14:0,45,672	0/0:24,0:27:67.67:0,68,889	0/0:19,0:20:59.47:0,59,810	0/0:21,0:24:64.65:0,65,850	0/0:18,0:18:50.91:0,51,737	0/0:16,0:16:45.14:0,45,672	0/0:35,0:35:93.29:0,93,1372	0/0:22,0:22:57.15:0,57,845	1/1:4,19:24:62.55:629,63,0	1/1:7,15:22:45.09:479,45,0	0/0:29,0:29:68.66:0,69,925	0/0:23,0:23:63.16:0,63,905	0/0:17,0:18:39.08:0,39,536	0/0:18,0:18:50.66:0,51,742	1/1:1,8:9:24.06:255,24,0	1/1:6,12:18:34.85:354,35,0	0/0:24,0:24:63.21:0,63,951	0/0:25,0:26:65.68:0,66,908	0/0:23,0:23:39.12:0,39,578	0/0:3,0:4:12.04:0,12,167
chr10	70066304	.	A	AATAAT	4636.80	PASS	AB=0.644;AC=20;AF=0.385;AN=52;BaseQRankSum=-7.050;DP=257;FS=26.253;HRun=0;HaplotypeScore=47.3826;InbreedingCoeff=0.5865;MQ=84.17;MQ0=0;MQRankSum=-1.631;QD=40.67;ReadPosRankSum=-0.741;VQSLOD=2.3807;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,3:6:6.02:173,6,0	1/1:0,2:2:6.02:174,6,0	0/0:14,0:12:7.20:0,7,119	0/0:20,0:15:3.59:0,4,116	1/1:4,2:6:6.02:174,6,0	0/0:15,0:15:33.10:0,33,595	0/0:5,0:5:12.03:0,12,198	1/1:18,23:44:78.18:1521,78,0	0/0:4,0:4:9.01:0,9,128	0/0:9,0:9:18.05:0,18,283	0/0:6,0:6:6.02:0,6,114	0/0:8,0:8:9.02:0,9,139	0/0:9,0:9:18.05:0,18,312	0/0:4,0:4:9.03:0,9,163	0/0:9,0:9:12.04:0,12,228	0/0:7,0:7:9.03:0,9,171	0/1:6,13:20:10.80:1039,0,11	0/0:10,0:10:12.04:0,12,228	1/1:0,2:2:6.02:174,6,0	1/1:4,4:8:12.04:348,12,0	./.	0/0:3,0:3:3.01:0,3,57	1/1:4,1:5:3.01:87,3,0	./.	0/0:18,0:18:42.09:0,42,702	0/1:4,3:7:45.08:249,0,45	1/1:3,9:12:21.07:610,21,0	1/1:1,1:2:3.01:87,3,0
chr10	70066367	.	A	AATAATATAATATAAT	2971.34	PASS	AB=0.982;AC=20;AF=0.526;AN=38;BaseQRankSum=2.848;DP=186;FS=3.046;HRun=0;HaplotypeScore=76.2221;InbreedingCoeff=0.5085;MQ=88.93;MQ0=3;MQRankSum=-4.869;QD=22.51;ReadPosRankSum=-4.076;VQSLOD=0.6603;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,0:2:0.28:13,0,0	0/1:14,0:8:21.81:26,0,22	0/1:26,0:15:8.69:11,0,9	./.	0/0:12,0:12:24.08:0,24,1001	0/0:3,0:3:3.01:0,3,50	1/1:46,0:43:60.13:1597,60,0	./.	0/0:8,0:8:21.07:0,21,693	0/0:2,0:2:6.02:0,6,250	0/0:2,0:2:6.01:0,6,77	0/0:8,0:8:18.06:0,18,628	./.	./.	0/0:2,0:2:6.02:0,6,250	1/1:11,0:11:17.80:207,18,0	1/1:2,4:10:3.01:215,3,0	1/1:7,0:7:6.02:205,6,0	./.	1/1:1,0:3:3.01:96,3,0	./.	./.	./.	0/0:8,0:8:9.03:0,9,319	1/1:0,0:4:9.03:268,9,0	1/1:2,0:4:6.02:192,6,0	1/1:1,0:4:9.03:287,9,0
chr10	70068818	.	C	CT	4921.22	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-13.216;DP=694;FS=0.355;HRun=6;HaplotypeScore=80.6465;InbreedingCoeff=0.9801;MQ=87.73;MQ0=0;MQRankSum=-1.584;QD=32.38;ReadPosRankSum=1.671;VQSLOD=5.0505;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,150,1511	1/1:2,13:15:39.08:473,39,0	0/0:23,0:23:48.08:0,48,476	0/0:29,0:29:72.15:0,72,722	0/0:22,0:22:60.12:0,60,605	0/0:9,0:9:24.05:0,24,245	0/0:20,0:20:57.11:0,57,575	0/0:36,0:36:93.20:0,93,949	0/0:23,0:23:63.14:0,63,643	0/0:15,0:15:45.06:0,45,444	0/0:10,0:10:26.41:0,26,247	0/0:37,0:37:99:0,102,1034	0/0:19,0:19:51.11:0,51,520	0/0:23,0:23:63.14:0,63,643	0/0:38,0:38:99:0,111,1124	0/0:35,0:35:99:0,102,1035	0/0:35,0:35:99:0,99,994	0/0:23,0:23:60.10:0,60,600	1/1:3,20:23:63.20:789,63,0	1/1:2,28:30:78.25:981,78,0	1/1:2,23:25:66.21:830,66,0	0/0:23,0:23:66.14:0,66,671	0/0:19,0:19:51.11:0,51,520	0/0:15,0:15:39.09:0,39,398	0/0:31,0:31:81.03:0,81,795	1/1:3,27:30:72.23:904,72,0	1/1:2,25:27:69.22:868,69,0	1/1:0,2:2:6.02:75,6,0
chr10	70069971	.	C	CA	5004.91	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.271;DP=616;FS=5.313;HRun=1;HaplotypeScore=67.2517;InbreedingCoeff=0.9936;MQ=85.45;MQ0=0;MQRankSum=-4.729;QD=40.69;ReadPosRankSum=0.455;VQSLOD=5.3453;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,1618	0/0:11,0:11:33.11:0,33,428	0/0:17,0:17:51.15:0,51,629	0/0:23,0:23:53.90:0,54,673	0/0:16,0:16:48.14:0,48,608	0/0:24,0:24:69.22:0,69,894	0/0:28,0:28:84.27:0,84,1090	0/0:22,0:22:57.18:0,57,729	0/0:27,0:27:81.23:0,81,1012	0/0:17,0:17:48.16:0,48,623	0/0:24,0:24:72.23:0,72,935	0/0:31,0:31:90.27:0,90,1152	0/0:25,0:25:75.24:0,75,973	0/0:20,0:20:60.20:0,60,779	0/0:27,0:27:78.25:0,78,1013	0/0:26,0:26:78.25:0,78,1012	0/0:21,0:21:63.20:0,63,818	0/0:14,0:14:36.12:0,36,467	1/1:0,17:17:51.11:680,51,0	1/1:1,20:21:54.14:764,54,0	1/1:0,29:29:87.29:1267,87,0	0/0:16,0:16:42.14:0,42,545	0/0:25,0:25:72.23:0,72,934	0/0:19,0:19:57.19:0,57,740	0/0:17,0:17:48.16:0,48,623	1/1:1,17:18:15.21:696,15,0	1/1:2,31:33:96.31:1379,96,0	1/1:0,5:5:15.05:219,15,0
chr10	70071131	.	C	CG	1591.31	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.523;DP=757;FS=8.455;HRun=0;HaplotypeScore=68.4961;InbreedingCoeff=0.9700;MQ=89.57;MQ0=0;MQRankSum=1.322;QD=40.80;ReadPosRankSum=-5.701;VQSLOD=1.0435;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1398	0/0:11,0:11:33.11:0,33,460	0/0:29,0:29:66.10:0,66,987	0/0:32,0:32:71.35:0,71,1098	0/0:26,0:26:72.24:0,72,1006	0/0:33,0:33:99:0,99,1336	0/0:36,0:36:99:0,108,1474	1/1:0,39:39:99:1686,111,0	0/0:28,0:28:84.27:0,84,1157	0/0:37,0:37:99:0,102,1400	0/0:21,0:21:63.19:0,63,847	0/0:27,0:27:81.25:0,81,1099	0/0:29,0:29:84.28:0,84,1174	0/0:22,0:22:66.21:0,66,906	0/0:37,0:37:99:0,108,1504	0/0:40,0:40:99:0,120,1676	0/0:29,0:29:84.28:0,84,1172	0/0:19,0:19:54.18:0,54,755	0/0:15,0:15:45.15:0,45,629	0/0:33,0:33:99:0,99,1367	0/0:31,0:31:93.30:0,93,1283	0/0:24,0:24:72.24:0,72,1004	0/0:14,0:14:42.14:0,42,586	0/0:16,0:16:48.16:0,48,671	0/0:29,0:28:84.28:0,84,1174	0/0:35,0:35:99:0,102,1397	0/0:27,0:27:81.27:0,81,1132	0/0:4,0:4:12.04:0,12,167
chr10	70071791	.	A	ATTGTTTTTGTTTATTTTG	32241.70	PASS	AB=0.867;AC=52;AF=0.929;AN=56;BaseQRankSum=-8.234;DP=313;FS=24.320;HRun=0;HaplotypeScore=393.5370;InbreedingCoeff=-0.0936;MQ=60.96;MQ0=0;MQRankSum=-1.117;QD=103.01;ReadPosRankSum=0.380;VQSLOD=3.6327;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:38.50:1931,38,0	1/1:5,0:5:4.77:285,5,0	0/1:5,1:10:14.56:730,0,15	0/1:3,0:4:16.09:304,0,16	1/1:25,0:25:43.13:2237,43,0	1/1:12,0:12:23.90:1371,24,0	1/1:6,0:6:15.05:878,15,0	1/1:10,0:10:30.09:1478,30,0	1/1:10,0:10:14.62:1437,15,0	1/1:20,0:20:37.76:2215,38,0	1/1:15,0:15:34.90:1176,35,0	0/1:8,0:8:1.37:856,0,1	1/1:8,0:8:6.48:646,6,0	1/1:13,0:13:33.10:1895,33,0	1/1:11,0:11:18.86:1760,19,0	1/1:10,0:10:6.04:1297,6,0	1/1:4,0:4:8.93:284,9,0	1/1:5,0:5:15:635,15,0	1/1:4,0:4:6.02:230,6,0	0/1:23,0:23:3.33:1316,0,3	1/1:9,0:9:17.84:592,18,0	1/1:13,0:13:16.29:1016,16,0	1/1:13,0:13:30.52:2159,31,0	1/1:8,0:8:14.82:692,15,0	1/1:21,0:21:39.50:2708,40,0	1/1:13,0:13:21.21:867,21,0	1/1:13,0:13:31.79:1156,32,0	1/1:4,0:4:0.89:90,1,0
chr10	70073666	.	AT	A	7388.46	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=14.538;DP=594;FS=5.925;HRun=8;HaplotypeScore=60.0368;InbreedingCoeff=0.9884;MQ=67.33;MQ0=0;MQRankSum=-0.993;QD=24.22;ReadPosRankSum=-0.438;VQSLOD=5.3557;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,37:40:99:1014,105,0	1/1:0,9:9:24.04:232,24,0	0/0:8,0:8:17.94:0,18,189	0/0:6,0:6:18.05:0,18,206	1/1:4,24:28:71.95:664,72,0	0/0:21,0:21:54.17:0,54,652	0/0:22,0:22:60.11:0,60,683	1/1:2,27:29:81.09:770,81,0	0/0:29,0:29:78.21:0,78,919	0/0:21,0:21:57.15:0,57,647	0/0:25,0:25:72.21:0,72,858	0/0:26,0:26:66.19:0,66,784	0/0:16,0:16:42.12:0,42,496	0/0:23,0:23:63.18:0,63,750	0/0:23,0:23:60.17:0,60,703	0/0:28,0:28:81.21:0,81,962	1/1:2,20:22:54.08:521,54,0	1/1:4,15:19:42.06:405,42,0	1/1:4,22:26:66.07:626,66,0	1/1:2,27:29:75.03:706,75,0	1/1:3,14:17:39.06:377,39,0	0/0:17,0:17:51.16:0,51,615	1/1:0,15:15:45.07:434,45,0	1/1:1,6:7:18.03:174,18,0	0/0:24,0:24:69.20:0,69,822	1/1:6,28:34:50.88:770,51,0	1/1:4,23:27:63.09:608,63,0	1/1:0,3:3:9.01:87,9,0
chr10	70075527	.	AAC	A	1322.83	PASS	AB=0.856;AC=23;AF=0.442;AN=52;BaseQRankSum=-1.746;DP=629;FS=5.352;HRun=0;HaplotypeScore=103.4002;InbreedingCoeff=0.4266;MQ=65.94;MQ0=14;MQRankSum=-0.759;QD=4.12;ReadPosRankSum=0.999;VQSLOD=1.7151;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:30:20.79:0,21,247	0/0:4,0:4:2.99:0,3,24	0/0:42,0:26:0:0,0,0	./.	0/0:13,0:17:15.49:0,15,163	0/1:8,2:10:6.85:27,0,7	1/1:19,7:26:18.04:194,18,0	./.	1/1:15,5:20:11.06:102,11,0	1/1:17,0:17:8.93:72,9,0	1/1:8,5:13:5.58:45,6,0	1/1:27,0:28:10.25:170,10,0	1/1:13,1:15:8.44:56,8,0	1/1:12,4:17:11.86:111,12,0	0/1:21,6:28:14.87:210,0,15	1/1:13,6:20:17.88:175,18,0	0/1:26,2:40:31.78:32,0,231	0/0:7,0:7:3.01:0,3,34	0/0:13,0:13:16.18:0,16,119	0/0:10,0:10:1.25:0,1,3	0/0:44,0:43:25.57:0,26,193	0/1:15,8:23:23.49:173,0,23	0/0:14,0:15:8.99:0,9,75	0/1:23,2:38:42.01:42,0,158	1/1:20,1:25:11.53:89,12,0	0/0:29,0:28:26.77:0,27,179	0/0:15,0:17:14.99:0,15,150	0/0:1,0:4:2.50:0,2,9
chr10	70076298	.	TAC	T	315.38	PASS	AB=0.917;AC=18;AF=0.750;AN=24;BaseQRankSum=1.257;DP=485;FS=5.679;HRun=0;HaplotypeScore=70.8643;InbreedingCoeff=0.0169;MQ=67.69;MQ0=12;MQRankSum=0.527;QD=1.58;ReadPosRankSum=1.501;VQSLOD=0.8431;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:6,0:8:2.84:14,3,0	./.	./.	./.	./.	0/1:31,1:32:8.30:8,0,18	./.	0/1:14,1:16:34.70:37,0,35	./.	0/0:7,0:7:2.94:0,3,18	1/1:19,3:22:6.01:63,6,0	./.	1/1:16,1:18:8.82:66,9,0	0/1:10,1:10:25.54:26,0,29	1/1:18,2:20:6.02:63,6,0	1/1:12,0:16:11.36:56,11,0	./.	1/1:15,0:16:2.84:14,3,0	./.	./.	./.	./.	0/1:22,0:25:0:0,0,0	1/1:11,3:15:6.02:63,6,0	./.	./.	./.
chr10	70077637	.	GGTGCT	G	11765.47	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=17.892;DP=840;FS=6.225;HRun=0;HaplotypeScore=160.5913;InbreedingCoeff=0.9997;MQ=80.13;MQ0=0;MQRankSum=-8.432;QD=54.72;ReadPosRankSum=0.420;VQSLOD=5.0070;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:84.29:1816,84,0	1/1:1,21:22:56.88:1237,57,0	0/0:18,0:18:51.18:0,51,1565	0/0:27,0:27:69.23:0,69,2002	1/1:2,28:30:81.28:1698,81,0	0/0:27,0:27:81.28:0,81,2550	0/0:28,0:28:81.28:0,81,2560	1/1:9,31:40:93.32:2006,93,0	0/0:34,0:34:99:0,102,3133	0/0:41,0:41:99:0,120,3668	0/0:29,0:29:81.28:0,81,2476	0/0:30,0:30:90.31:0,90,2802	0/0:35,0:35:99:0,105,3309	0/0:32,0:32:93.32:0,93,2874	0/0:51,0:51:99:0,151,4666	0/0:38,0:38:99:0,114,3589	1/1:1,25:26:66.18:1388,66,0	1/1:1,16:17:42.14:887,42,0	0/0:23,0:23:63.22:0,63,1968	0/0:34,0:34:99:0,102,3038	0/0:31,0:31:93.32:0,93,2917	0/0:29,0:29:84.29:0,84,2624	1/1:1,20:21:57.20:1237,57,0	1/1:1,26:27:69.24:1498,69,0	0/0:34,0:34:99:0,102,3109	0/0:47,0:47:99:0,141,4315	0/0:29,0:29:87.30:0,87,2656	0/0:8,0:8:24.08:0,24,749
chr10	70078783	.	AT	A	662.12	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=3.407;DP=678;FS=11.290;HRun=9;HaplotypeScore=76.8531;InbreedingCoeff=0.4712;MQ=71.55;MQ0=0;MQRankSum=0.578;QD=6.13;ReadPosRankSum=-1.216;VQSLOD=0.2578;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.15:0,72,790	1/1:0,16:16:39.02:356,39,0	0/0:10,0:10:0.06:0,0,52	0/0:12,0:10:9.66:0,10,87	0/0:25,0:25:69.17:0,69,774	0/0:29,0:29:84.18:0,84,919	0/0:23,0:23:60.15:0,60,672	0/0:37,0:36:96.11:0,96,1038	0/0:24,0:24:66.13:0,66,728	0/0:33,0:33:87.21:0,87,956	0/0:19,0:19:48.14:0,48,555	0/0:30,0:30:87.24:0,87,988	0/0:37,0:37:99:0,105,1160	0/0:20,0:20:54.09:0,54,587	0/0:38,0:38:96.26:0,96,1088	0/0:21,0:21:53.95:0,54,602	0/0:21,0:21:57.15:0,57,647	1/1:2,18:20:45.02:411,45,0	0/1:26,0:26:10.17:10,0,135	0/0:30,0:30:62.16:0,62,257	0/1:8,0:8:5.37:5,0,39	0/0:24,0:24:68.74:0,69,734	0/0:23,0:23:57.17:0,57,659	0/0:23,0:23:66.18:0,66,754	0/0:26,0:26:75.18:0,75,828	0/0:24,0:24:7.87:0,8,169	0/1:38,0:38:15.27:15,0,193	0/0:14,0:14:35.70:0,36,137
chr10	70078953	.	AAAC	A	641.26	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.544;DP=764;FS=0.000;HRun=0;HaplotypeScore=103.1617;InbreedingCoeff=0.9575;MQ=60.90;MQ0=6;MQRankSum=1.246;QD=11.66;ReadPosRankSum=-3.531;VQSLOD=2.1797;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,102,1893	1/1:8,5:12:9.03:125,9,0	0/0:27,0:20:21:0,21,245	0/0:25,0:16:14.60:0,15,214	0/0:23,0:23:48.15:0,48,864	0/0:20,0:20:30.09:0,30,528	0/0:16,0:16:30.10:0,30,567	1/1:24,18:41:48.10:630,48,0	0/0:30,0:30:56.72:0,57,1132	0/0:39,0:39:78.72:0,79,1408	0/0:19,0:19:39.13:0,39,709	0/0:25,0:25:51.17:0,51,971	0/0:31,0:31:57.19:0,57,1000	0/0:25,0:25:60.21:0,60,1179	0/0:28,0:28:72.25:0,72,1375	0/0:26,0:26:51.17:0,51,934	0/0:27,0:27:54.18:0,54,1009	0/0:29,0:29:55.83:0,56,1052	0/0:22,0:22:36.11:0,36,622	0/0:33,1:34:36.27:0,36,1376	0/0:33,0:33:72.25:0,72,1376	0/0:24,0:24:54.18:0,54,997	0/0:23,0:23:48.16:0,48,896	0/0:43,0:43:93.32:0,93,1739	0/0:17,0:17:45.15:0,45,832	0/0:37,0:37:99:0,99,1858	0/0:30,0:30:57.19:0,57,1068	0/0:14,0:14:39.13:0,39,729
chr10	70082089	.	CCCTCCA	C	2213.24	PASS	AC=22;AF=0.407;AN=54;BaseQRankSum=8.431;DP=546;FS=13.847;HRun=0;HaplotypeScore=124.9202;InbreedingCoeff=0.8033;MQ=70.05;MQ0=14;MQRankSum=-7.478;QD=12.72;ReadPosRankSum=-0.912;VQSLOD=1.8867;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,12:26:30.10:606,30,0	1/1:1,0:3:6.02:84,6,0	0/0:28,0:17:3.01:0,3,86	0/0:29,0:18:2.97:0,3,20	1/1:7,3:10:6.02:122,6,0	0/0:19,0:19:24.08:0,24,759	0/0:28,0:27:24.08:0,24,746	0/0:25,0:24:15.05:0,15,378	0/0:22,0:22:27.09:0,27,862	0/0:17,0:16:15.05:0,15,429	0/0:13,0:13:12.04:0,12,387	0/0:31,0:27:42.14:0,42,1345	0/0:23,0:23:24.08:0,24,720	0/0:29,0:27:36.09:0,36,1012	0/0:25,0:24:51.17:0,51,1493	0/0:24,0:24:42.14:0,42,1347	1/1:23,6:29:15.04:268,15,0	1/1:11,0:14:3.01:42,3,0	1/1:10,5:13:18.52:310,19,0	1/1:8,0:8:2.99:24,3,0	0/0:28,2:28:0.89:0,1,2	0/0:13,0:13:18.06:0,18,560	1/1:7,6:13:9.03:182,9,0	1/1:19,7:24:15.05:304,15,0	0/0:11,0:11:12.04:0,12,337	1/1:9,4:12:12.04:224,12,0	1/1:10,7:17:11.77:243,12,0	./.
chr10	70082256	.	CA	C	388.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.451;DP=599;FS=6.740;HRun=6;HaplotypeScore=59.6738;InbreedingCoeff=0.9535;MQ=80.25;MQ0=0;MQRankSum=-2.190;QD=20.46;ReadPosRankSum=0.866;VQSLOD=2.8170;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,1680	0/0:6,0:6:18.06:0,18,237	0/0:18,0:18:34.12:0,34,456	0/0:30,0:30:77.90:0,78,919	0/0:16,0:16:42.14:0,42,553	0/0:32,0:32:84.27:0,84,1105	0/0:31,0:31:90.28:0,90,1170	0/0:36,0:36:84.26:0,84,1093	0/0:22,0:22:60.20:0,60,787	0/0:18,0:18:51.17:0,51,671	0/0:8,0:8:18.06:0,18,237	0/0:23,0:23:69.22:0,69,904	0/0:21,0:21:57.17:0,57,735	0/0:22,0:22:57.13:0,57,702	0/0:27,0:27:81.26:0,81,1066	0/0:23,0:23:60.18:0,60,774	0/0:22,0:22:63.16:0,63,801	1/1:2,17:19:45.11:484,45,0	0/0:24,0:24:63.19:0,63,815	0/0:10,0:10:27.09:0,27,355	0/0:26,0:26:75.23:0,75,970	0/0:12,0:12:36.12:0,36,473	0/0:12,0:12:30.10:0,30,394	0/0:24,0:24:66.21:0,66,868	0/0:16,0:16:39.09:0,39,494	0/0:28,0:28:81.23:0,81,1045	0/0:24,0:24:72.23:0,72,944	0/0:4,0:4:12.02:0,12,142
chr10	70083338	.	CAAAT	C	7114.87	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.362;DP=642;FS=1.596;HRun=0;HaplotypeScore=111.0357;InbreedingCoeff=0.9988;MQ=69.34;MQ0=1;MQRankSum=-6.317;QD=41.13;ReadPosRankSum=1.892;VQSLOD=4.8787;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:26:63.21:1122,63,0	0/0:11,0:11:33.11:0,33,870	0/0:21,0:21:56.98:0,57,1237	0/0:30,0:30:78.18:0,78,1830	1/1:1,33:34:84.28:1462,84,0	0/0:18,0:18:54.19:0,54,1419	0/0:19,0:19:57.20:0,57,1500	1/1:3,38:40:99:1849,105,0	0/0:31,0:31:90.30:0,90,2303	0/0:27,0:27:78.27:0,78,2059	0/0:20,0:20:57.20:0,57,1469	0/0:12,0:12:36.12:0,36,951	0/0:28,0:28:84.29:0,84,2178	0/0:13,0:13:36.12:0,36,916	0/0:26,0:26:75.26:0,75,1969	0/0:20,0:20:57.20:0,57,1452	1/1:2,13:15:30.10:552,30,0	1/1:2,17:19:42.14:772,42,0	0/0:31,0:31:84.29:0,84,2210	0/0:30,0:30:87.29:0,87,2164	0/0:14,0:14:42.13:0,42,1028	0/0:21,0:21:54.19:0,54,1420	1/1:3,22:25:54.18:973,54,0	1/1:2,11:12:19.89:385,20,0	0/0:24,0:24:66.23:0,66,1743	0/0:30,0:30:84.29:0,84,2190	0/0:23,0:23:60.21:0,60,1582	0/0:20,0:20:54.18:0,54,1384
chr10	70084081	.	GAAAAC	G	441.61	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.846;DP=733;FS=2.846;HRun=0;HaplotypeScore=142.8257;InbreedingCoeff=0.9930;MQ=90.29;MQ0=0;MQRankSum=-2.267;QD=40.15;ReadPosRankSum=1.158;VQSLOD=3.9439;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.32:0,93,2844	0/0:9,0:9:27.09:0,27,826	0/0:35,0:35:99:0,102,2736	0/0:27,0:27:72.26:0,72,2154	0/0:24,0:24:72.21:0,72,1975	0/0:23,0:23:69.24:0,69,2203	0/0:24,0:24:69.23:0,69,2126	0/0:31,0:31:93.30:0,93,2676	0/0:23,0:23:69.23:0,69,2130	0/0:29,0:29:87.30:0,87,2773	0/0:24,0:24:66.20:0,66,1906	0/0:30,0:30:87.29:0,87,2716	0/0:33,0:33:99:0,99,3051	0/0:31,0:31:93.31:0,93,2886	0/0:33,0:33:96.31:0,96,2877	0/0:30,0:30:87.30:0,87,2774	0/0:26,0:26:78.22:0,78,2305	1/1:1,10:11:24.08:535,24,0	0/0:24,0:24:69.21:0,69,1954	0/0:36,0:36:99:0,105,3288	0/0:19,0:19:57.19:0,57,1703	0/0:31,0:31:93.31:0,93,2854	0/0:24,0:24:72.24:0,72,2191	0/0:33,0:33:93.31:0,93,2807	0/0:16,0:16:48.16:0,48,1490	0/0:34,0:34:99:0,102,3287	0/0:35,0:35:99:0,102,3239	0/0:7,0:7:21.07:0,21,675
chr10	70086266	.	A	ATATT	10454.66	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-9.820;DP=662;FS=0.000;HRun=0;HaplotypeScore=114.0102;InbreedingCoeff=0.9991;MQ=78.53;MQ0=3;MQRankSum=-5.736;QD=57.76;ReadPosRankSum=-0.089;VQSLOD=6.0809;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:95.98:2076,96,0	1/1:0,12:13:30.57:800,31,0	0/0:21,0:21:41.34:0,41,765	0/0:22,0:21:48.14:0,48,804	1/1:5,32:36:81.05:1770,81,0	0/0:18,0:18:51.17:0,51,944	0/0:33,0:33:81.28:0,81,1511	1/1:9,13:23:60.19:1466,60,0	0/0:19,0:19:54.19:0,54,1008	0/0:32,0:32:96.33:0,96,1792	0/0:23,0:23:63.22:0,63,1176	0/0:16,0:16:48.12:0,48,803	0/0:26,0:26:72.21:0,72,1278	0/0:23,0:23:69.09:0,69,1214	0/0:31,0:31:84.25:0,84,1474	0/0:30,0:30:90.22:0,90,1572	1/1:4,17:24:45.15:1156,45,0	0/0:15,0:15:42.14:0,42,783	0/0:15,0:15:39.12:0,39,682	0/0:29,0:29:84.27:0,84,1525	0/0:14,0:14:36.12:0,36,672	0/0:37,0:37:99:0,108,1949	1/1:0,25:25:72.25:1914,72,0	1/1:3,17:22:51.64:1273,52,0	0/0:15,0:15:39.12:0,39,697	0/0:24,0:24:72.22:0,72,1278	0/0:29,0:29:78.25:0,78,1424	0/0:9,0:9:21.07:0,21,392
chr10	70088086	.	A	ATGTG	6775.97	PASS	AB=0.611;AC=11;AF=0.196;AN=56;BaseQRankSum=-7.143;DP=826;FS=0.400;HRun=0;HaplotypeScore=134.1084;InbreedingCoeff=0.8666;MQ=55.34;MQ0=8;MQRankSum=1.830;QD=33.88;ReadPosRankSum=0.463;VQSLOD=4.6164;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,39:52:34.16:1951,34,0	0/0:19,0:19:41.97:0,42,613	0/0:41,0:17:24.51:0,25,369	0/0:48,0:21:11.11:0,11,242	1/1:9,15:28:18.49:744,18,0	0/0:32,0:32:57.13:0,57,897	0/0:39,0:38:84.10:0,84,1327	1/1:12,14:28:59.88:1070,60,0	0/0:25,0:25:44.91:0,45,669	0/0:43,0:43:81.22:0,81,1255	0/0:14,0:14:24.03:0,24,370	0/0:21,0:21:47.92:0,48,725	0/0:30,0:31:59.12:0,59,910	0/0:21,0:21:39.06:0,39,594	0/0:37,0:37:66.56:0,67,1270	0/0:38,0:38:87.26:0,87,1396	1/1:8,23:34:53.96:1352,54,0	0/0:30,0:33:72.21:0,72,1150	0/0:24,0:22:48.14:0,48,717	0/0:22,0:22:48.15:0,48,777	0/0:42,0:44:96.30:0,96,1537	0/0:19,0:19:30.10:0,30,502	0/1:8,13:22:14.44:745,0,14	1/1:11,20:35:41.61:915,42,0	0/0:15,0:15:24.06:0,24,353	0/0:29,0:29:57.18:0,57,915	0/0:23,0:23:32.93:0,33,630	0/0:7,0:8:8.11:0,8,251
chr10	70088446	.	AG	A	660.62	PASS	AB=0.538;AC=11;AF=0.196;AN=56;BaseQRankSum=2.722;DP=318;FS=0.768;HRun=7;HaplotypeScore=37.9975;InbreedingCoeff=0.7531;MQ=51.18;MQ0=7;MQRankSum=-1.405;QD=14.36;ReadPosRankSum=0.186;VQSLOD=2.4140;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:33.11:0,33,415	0/0:7,0:7:18.53:0,19,227	0/0:8,0:5:9.28:0,9,68	0/0:8,0:4:9.03:0,9,113	0/0:10,0:9:24.08:0,24,302	0/0:10,0:9:12.04:0,12,151	0/0:19,0:16:30.10:0,30,377	0/0:9,0:5:15.01:0,15,172	0/0:14,0:12:21.05:0,21,250	0/0:8,0:5:15.05:0,15,189	0/0:16,0:15:45.10:0,45,535	0/0:12,0:11:24.02:0,24,269	0/0:13,0:12:21.04:0,21,264	0/0:17,0:16:27.05:0,27,320	0/0:11,0:11:27.09:0,27,340	0/0:18,0:18:51.12:0,51,623	0/0:13,0:11:30.03:0,30,343	0/0:8,0:7:21.07:0,21,264	1/1:1,2:2:6.01:61,6,0	1/1:4,5:9:15.03:153,15,0	1/1:2,9:7:14.95:153,15,0	0/0:11,0:11:30.05:0,30,358	0/0:12,0:11:24.08:0,24,299	0/0:8,0:7:6.02:0,6,75	0/0:18,0:18:45.14:0,45,566	0/1:1,6:6:22.71:101,0,23	1/1:1,14:15:33.02:324,33,0	1/1:0,1:1:3.01:31,3,0
chr10	70088602	.	AGAGAGAGTGTGT	A	412.02	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=2.468;DP=525;FS=7.390;HRun=0;HaplotypeScore=136.5056;InbreedingCoeff=0.1699;MQ=44.15;MQ0=48;MQRankSum=-0.632;QD=2.22;ReadPosRankSum=-2.759;VQSLOD=1.2951;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:14:2.14:56,2,0	0/0:12,0:11:17.13:0,17,335	0/0:7,0:2:5.61:0,6,81	./.	0/0:21,0:17:9.03:0,9,173	0/0:15,0:14:29.88:0,30,914	0/0:14,0:13:18.52:0,19,402	0/0:34,0:22:33.05:0,33,541	0/0:11,0:9:24.08:0,24,863	0/0:20,0:17:34.67:0,35,913	0/0:17,0:12:15.03:0,15,313	0/0:28,0:24:44.45:0,44,1451	0/0:23,0:22:49.89:0,50,1306	0/0:16,0:15:24.07:0,24,1019	0/0:16,0:16:36.12:0,36,1328	0/0:22,0:20:42.42:0,42,1379	0/1:23,0:20:13.15:13,0,633	1/1:5,9:12:5.49:156,5,0	0/1:21,0:17:84.43:84,0,451	0/0:24,0:20:42.11:0,42,875	0/1:36,0:28:87.25:87,0,604	0/0:18,0:15:24.08:0,24,660	0/0:12,0:12:0:0,0,0	0/1:12,0:10:0.02:0,0,0	0/0:21,0:18:24.01:0,24,778	0/1:32,0:24:69.61:70,0,1008	0/1:16,0:16:40.43:40,0,684	0/1:15,0:10:41.58:42,0,229
chr10	70088608	.	AGTGTGT	A	677.06	PASS	AB=0.905;AC=17;AF=0.340;AN=50;BaseQRankSum=-0.324;DP=512;FS=5.624;HRun=0;HaplotypeScore=102.4609;InbreedingCoeff=0.3852;MQ=42.17;MQ0=43;MQRankSum=0.573;QD=2.89;ReadPosRankSum=-1.998;VQSLOD=1.2995;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:16:2.14:56,2,0	0/0:10,0:9:4.42:0,4,23	./.	./.	1/1:18,0:15:2.97:20,3,0	0/0:15,0:14:18.01:0,18,282	0/0:15,0:13:12.04:0,12,293	0/0:30,0:17:2.92:0,3,17	0/0:12,0:10:23.97:0,24,405	0/0:15,0:13:12.04:0,12,249	0/0:15,0:11:3.01:0,3,89	0/0:31,0:28:14.87:0,15,372	0/0:24,0:23:21.34:0,21,399	0/0:17,0:15:18.06:0,18,476	0/0:17,0:17:18.05:0,18,394	0/0:21,0:19:21.31:0,21,441	1/1:17,0:20:3.01:47,3,0	0/1:14,0:12:1.46:47,0,1	0/1:20,0:19:36.36:141,0,36	1/1:17,4:18:6:86,6,0	0/1:30,0:29:14.98:111,0,15	0/0:18,0:15:6.02:0,6,116	./.	0/1:13,0:11:0:0,0,0	0/0:22,0:19:9.03:0,9,241	0/1:29,6:27:9.38:168,0,9	1/1:14,0:16:8.19:93,8,0	1/1:8,3:8:3.01:57,3,0
chr10	70089743	.	CCA	C	396.65	PASS	AB=0.929;AC=20;AF=0.417;AN=48;BaseQRankSum=3.579;DP=613;FS=0.000;HRun=0;HaplotypeScore=82.1380;InbreedingCoeff=-0.0340;MQ=70.42;MQ0=16;MQRankSum=-0.270;QD=1.18;ReadPosRankSum=2.965;VQSLOD=1.3462;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:41:13.96:66,14,0	1/1:10,0:10:0.47:1,0,0	./.	./.	1/1:23,0:24:3.34:15,3,0	0/1:15,2:17:23.04:23,0,72	0/1:23,0:24:59.12:59,0,89	./.	0/1:23,2:25:15:15,0,164	0/0:19,0:16:6.02:0,6,88	0/0:15,0:15:6.02:0,6,78	0/0:19,0:19:10.58:0,11,130	0/1:19,4:23:99:115,0,126	0/1:15,0:15:22.94:23,0,58	1/1:20,0:21:5.84:46,6,0	0/1:17,2:19:11.41:11,0,188	0/0:21,0:22:2.90:0,3,17	1/1:19,0:22:5.68:28,6,0	0/0:13,0:11:9.02:0,9,108	0/0:15,0:15:12.04:0,12,171	0/0:27,0:26:6.01:0,6,67	0/1:20,0:20:20.50:20,0,79	./.	0/1:20,6:26:27.99:95,0,28	0/1:22,1:20:23.04:23,0,79	0/0:22,0:21:15.05:0,15,212	0/1:20,0:22:1.91:2,0,298	0/0:10,0:13:10.20:0,10,74
chr10	70097305	.	AACAC	A	948.69	PASS	AB=0.758;AC=6;AF=0.115;AN=52;BaseQRankSum=4.300;DP=675;FS=3.824;HRun=0;HaplotypeScore=110.9832;InbreedingCoeff=0.2651;MQ=70.40;MQ0=13;MQRankSum=0.266;QD=6.24;ReadPosRankSum=0.381;VQSLOD=2.0686;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,14:40:21.06:329,21,0	0/0:15,0:15:12.04:0,12,255	./.	./.	0/1:19,9:30:18.49:89,0,18	0/0:15,0:15:26.95:0,27,483	0/0:31,0:33:40.17:0,40,715	0/0:27,0:26:12.04:0,12,164	0/0:18,0:18:26.84:0,27,577	0/0:24,0:24:36.11:0,36,771	0/0:20,0:20:23.82:0,24,485	0/1:27,1:28:7.81:8,0,742	0/0:15,0:15:21.04:0,21,404	0/0:22,0:21:24.04:0,24,457	0/0:34,0:34:60.09:0,60,1143	0/0:29,0:30:44.85:0,45,880	0/1:14,22:39:3.93:626,0,4	0/0:19,0:20:18.83:0,19,228	0/0:17,0:18:8.96:0,9,140	0/0:16,0:19:9.03:0,9,184	0/0:22,0:36:21.07:0,21,380	0/0:19,0:22:29.55:0,30,476	0/1:9,1:15:21.13:21,0,170	0/0:19,0:33:36.94:0,37,345	0/0:13,0:15:2.81:0,3,363	0/0:23,0:23:39.51:0,40,721	0/0:11,0:13:18.06:0,18,361	0/0:8,0:8:6.02:0,6,139
chr10	70098312	.	TC	T	5723.10	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=13.501;DP=741;FS=1.035;HRun=4;HaplotypeScore=71.2199;InbreedingCoeff=0.9999;MQ=89.10;MQ0=0;MQRankSum=-2.735;QD=33.08;ReadPosRankSum=1.015;VQSLOD=5.4413;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:81.25:972,81,0	1/1:0,10:10:30.09:360,30,0	0/0:24,0:24:66.22:0,66,921	0/0:31,0:31:86.65:0,87,1105	1/1:0,29:29:81.25:971,81,0	0/0:22,0:22:63.21:0,63,882	0/0:34,0:34:99:0,99,1367	1/1:3,23:26:66.19:780,66,0	0/0:30,0:30:78.24:0,78,1059	0/0:25,0:25:75.25:0,75,1047	0/0:28,0:28:81.26:0,81,1115	0/0:30,0:30:84.27:0,84,1155	0/0:29,0:29:87.29:0,87,1212	0/0:30,0:30:84.26:0,84,1146	0/0:37,0:37:99:0,108,1512	0/0:20,0:20:60.19:0,60,824	1/1:0,28:28:84.26:1007,84,0	0/0:19,0:19:57.19:0,57,797	0/0:24,0:24:69.21:0,69,948	0/0:31,0:31:90.29:0,90,1238	0/0:48,0:48:99:0,135,1872	0/0:19,0:19:57.19:0,57,798	1/1:2,15:17:48.10:560,48,0	1/1:1,31:32:54.27:1074,54,0	0/0:17,0:17:51.17:0,51,713	0/0:31,1:32:54.28:0,54,1154	0/0:34,0:34:96.31:0,96,1317	./.
chr10	70101848	.	A	AG	1354.93	PASS	AC=36;AF=0.857;AN=42;BaseQRankSum=-2.028;DP=76;FS=0.000;HRun=3;HaplotypeScore=8.1534;InbreedingCoeff=0.2846;MQ=36.91;MQ0=22;MQRankSum=-2.879;QD=21.85;ReadPosRankSum=1.176;VQSLOD=2.6392;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,6:6:17.91:202,18,0	1/1:0,1:1:3.01:42,3,0	0/0:4,0:1:3.01:0,3,31	./.	./.	1/1:3,3:5:9:125,9,0	1/1:2,0:1:2.96:19,3,0	1/1:2,5:6:12.04:168,12,0	1/1:0,2:2:6.02:84,6,0	./.	1/1:1,1:2:5.93:58,6,0	1/1:1,2:2:6.02:84,6,0	1/1:0,1:1:3.01:42,3,0	1/1:0,2:2:6.02:84,6,0	1/1:0,1:1:3.01:42,3,0	./.	1/1:7,1:1:3.01:42,3,0	1/1:0,2:2:3.01:42,3,0	1/1:3,3:5:11.87:140,12,0	./.	0/0:4,0:1:3.01:0,3,36	./.	1/1:0,1:1:3.01:42,3,0	1/1:3,1:2:3.01:42,3,0	1/1:0,1:1:3.01:42,3,0	0/0:2,0:1:3.01:0,3,36	1/1:1,4:4:12.04:167,12,0	./.
chr10	70104364	.	TAAG	T	404.86	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.850;DP=668;FS=6.304;HRun=0;HaplotypeScore=87.9750;InbreedingCoeff=0.9827;MQ=80.96;MQ0=0;MQRankSum=-2.089;QD=28.92;ReadPosRankSum=0.982;VQSLOD=3.2726;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.28:0,81,1835	0/0:17,0:17:48.16:0,48,1067	0/0:19,0:19:51.18:0,51,1090	0/0:19,0:18:41.32:0,41,953	0/0:34,0:34:99:0,99,2221	0/0:23,0:23:69.24:0,69,1563	0/0:14,0:14:42.14:0,42,950	0/0:27,0:27:75.24:0,75,1610	0/0:24,0:24:72.23:0,72,1570	0/0:33,0:33:96.32:0,96,2097	0/0:23,0:23:66.21:0,66,1431	0/0:17,0:17:51.16:0,51,1091	0/0:24,0:24:69.24:0,69,1551	0/0:26,0:26:78.25:0,78,1688	0/0:31,0:31:90.31:0,90,2019	0/0:22,0:22:66.23:0,66,1495	0/0:26,0:26:78.26:0,78,1725	1/1:0,14:14:30.10:499,30,0	0/0:10,0:10:27.07:0,27,553	0/0:43,0:43:99:0,126,2794	0/0:6,0:6:15.05:0,15,340	0/0:27,0:27:78.27:0,78,1767	0/0:21,0:21:63.20:0,63,1364	0/0:23,0:23:63.17:0,63,1296	0/0:37,0:37:99:0,111,2452	0/0:42,0:42:99:0,126,2815	0/0:28,0:28:81.28:0,81,1817	0/0:11,0:11:33.11:0,33,721
chr10	70105835	.	TAA	T	465.66	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.051;DP=655;FS=2.425;HRun=2;HaplotypeScore=73.5811;InbreedingCoeff=0.9918;MQ=79.73;MQ0=0;MQRankSum=-1.568;QD=38.81;ReadPosRankSum=2.331;VQSLOD=3.8226;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.24:0,69,1402	1/1:0,12:12:36.10:560,36,0	0/0:29,0:27:77.45:0,77,1547	0/0:23,0:22:63.22:0,63,1215	0/0:25,0:25:75.24:0,75,1488	0/0:27,0:27:81.24:0,81,1558	0/0:27,0:27:81.26:0,81,1608	0/0:41,0:41:99:0,123,2501	0/0:16,0:16:45.13:0,45,877	0/0:19,0:19:57.20:0,57,1154	0/0:24,0:24:72.25:0,72,1455	0/0:31,0:31:93.32:0,93,1878	0/0:26,0:26:78.24:0,78,1500	0/0:22,0:22:66.23:0,66,1342	0/0:28,0:28:81.26:0,81,1601	0/0:30,0:30:90.31:0,90,1829	0/0:13,0:13:39.13:0,39,791	0/0:16,0:16:48.14:0,48,922	0/0:21,0:21:63.22:0,63,1281	0/0:44,0:44:99:0,132,2673	0/0:19,0:19:57.18:0,57,1102	0/0:20,0:20:60.21:0,60,1212	0/0:21,0:21:60.21:0,60,1207	0/0:17,0:17:45.15:0,45,915	0/0:21,0:21:63.22:0,63,1281	0/0:29,0:29:87.29:0,87,1726	0/0:25,0:25:72.25:0,72,1459	0/0:6,0:6:18.06:0,18,366
chr10	70106292	.	ATGTGTGTGTGTGTG	A	9457.76	PASS	AB=0.711;AC=23;AF=0.411;AN=56;BaseQRankSum=15.789;DP=648;FS=9.681;HRun=0;HaplotypeScore=277.1236;InbreedingCoeff=0.4460;MQ=58.82;MQ0=1;MQRankSum=-15.027;QD=30.02;ReadPosRankSum=1.156;VQSLOD=2.5603;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,6:18:1.08:738,1,0	1/1:1,8:9:19.79:719,20,0	0/0:27,0:18:29.23:0,29,689	0/0:21,0:14:12.03:0,12,228	1/1:4,32:35:66.70:2108,67,0	0/0:24,0:24:54.17:0,54,3001	0/0:22,0:25:54.19:0,54,2990	1/1:12,21:33:59.53:875,60,0	0/1:19,0:20:52.65:53,0,2335	0/0:24,0:24:60.21:0,60,3878	0/0:25,0:27:72.23:0,72,4373	0/0:17,0:17:42.02:0,42,2062	0/0:28,0:28:57.20:0,57,3502	0/0:16,0:16:42.14:0,42,2686	0/0:30,0:30:69.18:0,69,3786	0/0:36,0:36:84.29:0,84,5346	1/1:7,3:10:15.02:497,15,0	0/1:6,0:9:26.02:26,0,125	0/1:12,0:20:99:121,0,237	0/1:11,0:34:12.20:404,0,12	0/1:5,0:15:11.47:72,0,11	0/0:23,0:23:57.20:0,57,3740	1/1:2,27:29:66.23:2395,66,0	1/1:5,7:12:12.04:450,12,0	0/0:35,0:35:81.26:0,81,4931	0/1:16,0:28:99:309,0,578	1/1:5,0:30:67.31:639,67,0	0/1:6,0:11:52.32:52,0,138
chr10	70106682	.	TCATA	T	4836.10	PASS	AB=0.627;AC=17;AF=0.327;AN=52;BaseQRankSum=12.893;DP=842;FS=1.294;HRun=0;HaplotypeScore=143.5670;InbreedingCoeff=0.8976;MQ=70.87;MQ0=1;MQRankSum=-0.095;QD=19.66;ReadPosRankSum=1.090;VQSLOD=4.6520;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,8:21:21.07:327,21,0	0/0:6,0:10:10.28:0,10,160	./.	./.	1/1:14,17:31:45.01:621,45,0	0/0:32,0:32:24.05:0,24,961	0/0:19,0:19:21.07:0,21,494	0/0:43,0:43:16.83:0,17,344	0/0:33,1:34:22.44:0,22,1423	0/0:36,0:36:72.25:0,72,1691	0/0:24,0:24:45.13:0,45,1015	0/0:47,1:48:31.46:0,31,1724	0/0:59,0:59:59.57:0,60,1919	0/0:34,0:34:72.25:0,72,1674	0/0:40,0:40:75.26:0,75,1748	0/0:44,0:44:90.31:0,90,2090	1/1:7,12:19:23.87:347,24,0	0/0:8,0:13:12.04:0,12,199	1/1:8,7:15:24.08:368,24,0	1/1:15,20:35:39.01:519,39,0	1/1:12,23:35:45.15:702,45,0	0/0:31,0:31:48.16:0,48,1083	0/0:30,0:30:60.21:0,60,1387	0/0:28,0:28:63.20:0,63,1414	0/0:30,0:30:57.20:0,57,1324	0/1:13,19:32:10.66:828,0,11	1/1:16,24:39:60.20:936,60,0	1/1:9,9:18:12.04:187,12,0
chr10	70107485	.	C	CA	15906.82	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-17.413;DP=821;FS=8.528;HRun=3;HaplotypeScore=70.2444;InbreedingCoeff=0.9958;MQ=89.62;MQ0=1;MQRankSum=-4.501;QD=37.69;ReadPosRankSum=3.931;VQSLOD=5.0268;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,48:49:99:1806,129,0	1/1:1,15:16:42.14:588,42,0	0/0:28,0:28:72.20:0,72,842	0/0:34,0:33:80.97:0,81,952	1/1:1,29:30:84.28:1175,84,0	0/0:28,0:28:75.20:0,75,875	0/0:22,0:22:60.18:0,60,720	1/1:3,32:35:96.31:1323,96,0	0/0:40,0:40:99:0,117,1404	0/0:37,0:37:93.27:0,93,1106	0/0:14,0:14:42.13:0,42,500	0/0:36,0:36:99:0,102,1212	0/0:25,0:25:63.19:0,63,754	0/0:31,0:31:84.26:0,84,1007	0/0:32,0:32:93.28:0,93,1116	0/0:31,0:31:87.23:0,87,1018	1/1:0,32:32:81.27:1134,81,0	1/1:0,16:16:48.16:672,48,0	1/1:2,24:26:72.24:996,72,0	1/1:2,29:31:84.28:1176,84,0	1/1:3,51:54:99:1911,138,0	0/0:19,0:19:45.13:0,45,529	1/1:0,18:18:48.16:662,48,0	1/1:0,35:35:90.30:1260,90,0	0/0:22,0:22:66.20:0,66,792	1/1:2,34:36:99:1484,108,0	1/1:1,38:40:99:1553,111,0	1/1:0,4:4:12.04:168,12,0
chr10	70109900	.	T	TA	184.48	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.432;DP=620;FS=0.000;HRun=8;HaplotypeScore=66.2150;InbreedingCoeff=0.9288;MQ=75.28;MQ0=0;MQRankSum=-0.555;QD=18.45;ReadPosRankSum=0.510;VQSLOD=3.3605;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:71.98:0,72,640	0/0:10,0:10:30.02:0,30,274	0/0:14,0:14:23.12:0,23,220	0/0:15,0:15:16.50:0,17,178	0/0:39,0:39:99:0,111,1009	0/0:26,0:26:69.04:0,69,631	0/0:22,0:24:56.34:0,56,490	0/0:21,0:21:59.99:0,60,535	0/0:16,0:17:40.89:0,41,340	0/0:28,0:28:78.03:0,78,711	0/0:30,0:30:74.90:0,75,659	0/0:21,0:21:51.01:0,51,463	0/0:19,0:19:50.97:0,51,449	0/0:22,0:22:62.94:0,63,561	0/0:35,0:35:98.99:0,99,887	0/0:24,1:25:25.29:0,25,481	0/0:20,0:20:59.94:0,60,526	1/1:1,9:10:24.07:278,24,0	0/0:21,0:21:45:0,45,412	0/0:25,0:25:59.96:0,60,540	0/0:15,0:15:42.01:0,42,381	0/0:25,0:26:74.05:0,74,657	0/0:24,0:25:71.03:0,71,626	0/0:18,0:18:48.03:0,48,439	0/0:28,0:28:78.04:0,78,710	0/0:32,0:32:90.02:0,90,815	0/0:26,0:26:75.04:0,75,686	0/0:3,0:3:9:0,9,82
chr10	70111686	.	C	CAT	17963.12	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-17.480;DP=762;FS=1.175;HRun=0;HaplotypeScore=87.0282;InbreedingCoeff=0.9995;MQ=82.52;MQ0=1;MQRankSum=-4.026;QD=50.46;ReadPosRankSum=1.641;VQSLOD=5.9106;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:33:90.31:1722,90,0	1/1:1,12:14:33.07:600,33,0	0/0:24,0:24:62.04:0,62,890	0/0:29,0:29:84.28:0,84,1230	1/1:2,35:37:96.33:1848,96,0	0/0:26,0:26:78.26:0,78,1190	0/0:24,0:24:72.24:0,72,1099	1/1:5,28:35:93.28:1709,93,0	0/0:25,0:25:72.23:0,72,1079	0/0:32,0:32:90.31:0,90,1377	0/0:26,0:26:75.24:0,75,1123	0/0:20,0:20:57.18:0,57,851	0/0:34,0:34:99:0,102,1540	0/0:29,0:29:87.30:0,87,1329	0/0:43,0:43:99:0,129,1906	0/0:29,0:29:87.30:0,87,1332	1/1:0,31:32:87.30:1680,87,0	1/1:1,10:12:27.09:521,27,0	1/1:2,19:21:60.18:1124,60,0	1/1:1,30:31:90.31:1697,90,0	1/1:1,22:23:63.22:1217,63,0	0/0:29,0:29:87.28:0,87,1307	1/1:2,25:27:72.25:1391,72,0	1/1:1,11:12:30.10:580,30,0	0/0:36,0:36:99:0,105,1604	1/1:2,31:33:99:1851,99,0	1/1:4,30:35:81.12:1560,81,0	1/1:1,9:10:24.08:464,24,0
chr10	70115849	.	TAA	T	2909.32	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=0.124;DP=686;FS=1.267;HRun=12;HaplotypeScore=100.3562;InbreedingCoeff=0.9714;MQ=70.48;MQ0=0;MQRankSum=-1.962;QD=21.39;ReadPosRankSum=4.555;VQSLOD=3.3440;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,38:41:53.15:903,53,0	0/0:3,0:14:22.46:0,22,79	0/0:23,0:19:17.28:0,17,335	0/0:12,0:13:24.60:0,25,289	1/1:3,26:29:59.03:634,59,0	0/0:17,0:20:38.61:0,39,529	0/0:9,0:11:32.25:0,32,388	0/0:8,1:27:19.94:0,20,149	0/0:13,0:13:39.13:0,39,571	0/0:33,0:35:90.27:0,90,1263	0/0:28,0:30:77.22:0,77,1063	0/0:32,0:33:93.20:0,93,1305	0/0:35,0:36:98.82:0,99,1428	0/0:19,0:19:51.17:0,51,742	0/0:26,0:28:62.18:0,62,862	0/0:32,1:34:61.99:0,62,1242	1/1:1,21:22:45.10:458,45,0	0/0:2,0:27:69.11:0,69,658	0/0:6,0:19:42.08:0,42,429	0/0:8,0:40:99:0,102,952	0/0:2,0:13:30.04:0,30,283	0/0:21,0:21:53.65:0,54,730	1/1:0,19:20:50.86:571,51,0	1/1:1,23:24:51.11:519,51,0	0/0:24,0:25:59.69:0,60,858	0/0:6,0:27:66.24:0,66,626	0/0:5,0:32:75.12:0,75,730	0/0:3,0:8:6.01:0,6,67
chr10	70116230	.	A	AG	15566.20	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-17.858;DP=779;FS=0.839;HRun=1;HaplotypeScore=73.2122;InbreedingCoeff=0.9920;MQ=89.94;MQ0=0;MQRankSum=-1.471;QD=41.07;ReadPosRankSum=2.996;VQSLOD=5.4537;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,51:51:99:2068,138,0	1/1:0,11:11:30.10:450,30,0	0/0:24,0:24:66.20:0,66,831	0/0:35,0:35:99:0,105,1272	1/1:1,25:26:69.23:1034,69,0	0/0:35,0:35:99:0,102,1324	0/0:26,0:26:78.22:0,78,984	1/1:2,30:32:90.29:1328,90,0	0/0:22,0:22:66.21:0,66,857	0/0:34,0:34:99:0,102,1324	0/0:20,0:20:60.18:0,60,766	0/0:22,0:22:66.19:0,66,839	0/0:30,0:30:78.24:0,78,998	0/0:32,0:32:96.31:0,96,1247	0/0:38,0:38:99:0,105,1363	0/0:31,0:31:90.29:0,90,1169	1/1:0,29:29:84.28:1259,84,0	1/1:0,22:22:60.20:898,60,0	1/1:2,15:18:48.09:691,48,0	1/1:2,24:26:69.23:1033,69,0	1/1:1,40:41:99:1774,120,0	0/0:31,0:31:87.28:0,87,1130	1/1:1,27:28:75.25:1119,75,0	1/1:2,29:31:84.28:1259,84,0	0/0:20,0:20:60.20:0,60,779	1/1:1,27:28:81.27:1214,81,0	1/1:1,32:33:87.29:1304,87,0	1/1:0,3:3:9.03:135,9,0
chr10	70117622	.	AAG	A	5170.52	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.586;DP=544;FS=6.054;HRun=0;HaplotypeScore=68.4447;InbreedingCoeff=0.9960;MQ=86.60;MQ0=1;MQRankSum=-2.152;QD=37.74;ReadPosRankSum=1.143;VQSLOD=6.8645;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:51.17:751,51,0	1/1:0,7:7:15.05:221,15,0	0/0:21,0:21:63.21:0,63,1142	0/0:16,0:16:45.12:0,45,765	1/1:1,29:30:81.23:1168,81,0	0/0:46,0:46:99:0,135,2491	0/0:14,0:14:42.14:0,42,780	1/1:2,27:29:78.25:1130,78,0	0/0:17,0:17:51.17:0,51,948	0/0:19,0:19:57.20:0,57,1067	0/0:13,0:13:39.13:0,39,730	0/0:20,0:20:60.21:0,60,1099	0/0:17,0:17:45.15:0,45,836	0/0:9,0:9:27.09:0,27,489	0/0:20,0:20:54.19:0,54,1001	0/0:18,0:18:51.16:0,51,923	1/1:0,19:18:48.16:707,48,0	0/0:21,0:20:60.21:0,60,1117	0/0:20,0:20:54.18:0,54,958	0/0:28,0:28:81.28:0,81,1517	0/0:19,0:19:57.20:0,57,1067	0/0:16,0:16:48.15:0,48,868	1/1:0,23:23:60.20:884,60,0	1/1:0,8:8:21.07:309,21,0	0/0:14,0:14:39.13:0,39,731	0/0:24,0:24:72.25:0,72,1341	0/0:26,0:26:75.26:0,75,1405	0/0:9,0:9:27.09:0,27,506
chr10	70117874	.	CAAAGGGG	C	5583.67	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.112;DP=596;FS=6.542;HRun=0;HaplotypeScore=149.7922;InbreedingCoeff=0.9584;MQ=80.83;MQ0=0;MQRankSum=-12.321;QD=41.06;ReadPosRankSum=0.535;VQSLOD=4.4660;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,21:29:51.17:1234,51,0	1/1:0,1:1:3.01:73,3,0	0/0:30,0:31:69.17:0,69,2127	0/0:28,0:28:69.07:0,69,2293	1/1:5,12:17:33.11:797,33,0	0/0:26,0:26:72.25:0,72,2491	0/0:24,0:24:60.21:0,60,2185	1/1:6,17:23:51.14:1106,51,0	0/0:12,0:12:33.11:0,33,1264	0/0:24,0:24:66.23:0,66,2349	0/0:22,0:22:66.23:0,66,2459	0/0:26,0:26:69.24:0,69,2577	0/0:27,0:27:78.27:0,78,2903	0/0:18,0:18:45.15:0,45,1643	0/0:33,0:33:99:0,99,3470	0/0:24,0:24:65.71:0,66,2398	1/1:9,18:27:36.12:871,36,0	0/0:13,0:13:30.05:0,30,963	0/0:23,0:23:60.21:0,60,2093	0/0:15,0:15:39.13:0,39,1462	0/0:30,2:32:14.54:0,15,3122	0/0:17,0:17:48.15:0,48,1707	1/1:1,12:13:36.12:869,36,0	1/1:10,16:26:25.32:634,25,0	0/0:21,0:21:57.20:0,57,2032	0/0:20,0:20:54.17:0,54,1844	0/0:20,0:20:51.18:0,51,1885	0/0:4,0:4:12.04:0,12,415
chr10	70123327	.	CAG	C	612.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.612;DP=789;FS=0.000;HRun=0;HaplotypeScore=92.0792;InbreedingCoeff=0.9959;MQ=82.59;MQ0=2;MQRankSum=-2.739;QD=38.25;ReadPosRankSum=-0.330;VQSLOD=5.3851;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,157,2910	1/1:0,16:16:48.16:707,48,0	0/0:30,0:31:82.55:0,83,1527	0/0:20,0:20:46.29:0,46,776	0/0:28,0:28:84.27:0,84,1533	0/0:19,0:19:57.20:0,57,1061	0/0:44,0:44:99:0,132,2415	0/0:31,0:31:87.29:0,87,1601	0/0:28,0:28:81.28:0,81,1516	0/0:22,0:22:60.21:0,60,1121	0/0:24,0:24:72.23:0,72,1316	0/0:29,0:29:87.30:0,87,1629	0/0:32,0:32:96.33:0,96,1757	0/0:28,0:28:84.27:0,84,1540	0/0:33,0:33:93.31:0,93,1696	0/0:32,0:32:93.32:0,93,1739	0/0:31,0:31:93.32:0,93,1711	0/0:16,0:16:45.11:0,45,790	0/0:18,0:18:48.16:0,48,863	0/0:27,0:27:81.28:0,81,1509	0/0:50,0:49:99:0,138,2527	0/0:32,0:32:90.31:0,90,1686	0/0:16,0:16:48.15:0,48,860	0/0:27,0:27:75.26:0,75,1395	0/0:28,0:28:78.27:0,78,1454	0/0:33,0:33:96.31:0,96,1709	0/0:34,0:33:96.33:0,96,1765	0/0:7,0:7:21.07:0,21,393
chr10	70124311	.	AAG	A	7605.09	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.540;DP=704;FS=0.660;HRun=0;HaplotypeScore=85.7357;InbreedingCoeff=0.9984;MQ=82.28;MQ0=2;MQRankSum=-2.622;QD=35.87;ReadPosRankSum=5.315;VQSLOD=7.1882;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,52:51:99:1933,138,0	1/1:0,20:20:57.19:798,57,0	0/0:24,0:24:69.22:0,69,1137	0/0:17,0:17:30.56:0,31,436	1/1:4,21:25:54.18:756,54,0	0/0:23,0:23:69.24:0,69,1236	0/0:26,0:26:72.25:0,72,1288	1/1:5,26:31:75.25:1050,75,0	0/0:24,0:24:69.24:0,69,1242	0/0:31,0:31:90.31:0,90,1621	0/0:15,0:15:39.12:0,39,645	0/0:31,0:31:90.31:0,90,1605	0/0:24,0:24:72.25:0,72,1282	0/0:20,0:20:57.20:0,57,1020	0/0:23,0:23:69.24:0,69,1242	0/0:25,0:25:69.24:0,69,1237	1/1:1,30:31:87.29:1219,87,0	0/0:6,0:6:18.06:0,18,324	0/0:16,0:16:39.13:0,39,674	0/0:31,0:31:87.30:0,87,1562	0/0:25,0:25:69.24:0,69,1243	0/0:30,0:30:81.28:0,81,1458	1/1:2,20:22:54.18:757,54,0	1/1:0,30:30:78.26:1093,78,0	0/0:23,0:23:63.21:0,63,1105	0/0:29,0:29:84.29:0,84,1513	0/0:33,0:33:90.29:0,90,1573	0/0:16,0:16:48.16:0,48,844
chr10	70124837	.	A	AAAG	9637.10	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-9.486;DP=786;FS=1.054;HRun=0;HaplotypeScore=122.9388;InbreedingCoeff=0.9900;MQ=72.68;MQ0=4;MQRankSum=-4.086;QD=47.01;ReadPosRankSum=0.572;VQSLOD=6.2864;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,31:35:81.23:1703,81,0	1/1:2,3:6:9.03:202,9,0	0/0:28,0:19:45.08:0,45,666	0/0:42,0:27:33.51:0,34,633	1/1:4,28:32:78.09:1509,78,0	0/0:38,0:38:99:0,114,1805	0/0:22,0:22:57.18:0,57,906	1/1:5,16:23:50.64:949,51,0	0/0:27,0:27:78.24:0,78,1217	0/0:25,0:25:60.20:0,60,965	0/0:26,0:26:75.04:0,75,1174	0/0:35,0:35:99:0,102,1545	0/0:31,0:31:87.26:0,87,1356	0/0:36,0:36:99:0,102,1647	0/0:25,0:25:72.23:0,72,1159	0/0:28,0:28:81.25:0,81,1263	1/1:1,23:25:45.15:1007,45,0	1/1:2,10:12:27.06:558,27,0	0/0:18,0:18:51.16:0,51,791	0/0:32,0:32:93.30:0,93,1483	0/0:29,0:28:78.27:0,78,1275	0/0:35,0:35:81.81:0,82,1541	1/1:2,29:32:72.20:1562,72,0	1/1:0,39:39:99:2148,99,0	0/0:23,0:23:66.23:0,66,1085	0/0:30,0:30:87.30:0,87,1430	0/0:33,0:33:87.28:0,87,1402	0/0:17,0:17:48.14:0,48,765
chr10	70124882	.	GGAGA	G	6605.75	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.920;DP=772;FS=0.745;HRun=0;HaplotypeScore=148.3034;InbreedingCoeff=0.9445;MQ=65.82;MQ0=4;MQRankSum=-2.886;QD=40.03;ReadPosRankSum=2.921;VQSLOD=4.8979;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:77.97:0,78,1819	0/0:7,0:7:5.21:0,5,30	0/0:48,0:41:84.66:0,85,1884	0/0:35,0:21:47.99:0,48,976	0/0:31,0:32:87.09:0,87,2106	0/0:36,0:36:99:0,99,2434	0/0:19,0:19:51.16:0,51,1229	0/0:43,0:43:96.74:0,97,2418	0/0:30,0:30:84.29:0,84,2147	0/0:21,0:21:54.18:0,54,1336	0/0:20,0:20:57.18:0,57,1396	0/0:32,0:32:90.31:0,90,2332	0/0:32,0:32:87.30:0,87,2245	0/0:29,0:29:84.29:0,84,2163	0/0:21,0:21:53.96:0,54,1244	0/0:26,0:26:75.26:0,75,1944	0/0:25,0:24:57.18:0,57,1392	0/0:4,0:3:2.69:0,3,8	1/1:4,20:24:51.15:862,51,0	1/1:4,35:39:96.24:1613,96,0	1/1:3,24:26:54.18:957,54,0	0/0:35,0:35:99:0,102,2525	0/0:30,0:30:81.26:0,81,2014	0/0:32,0:32:74.94:0,75,1704	0/0:17,0:17:45.15:0,45,1129	1/1:4,20:24:57.19:1019,57,0	1/1:3,29:32:71.94:1293,72,0	1/1:3,16:19:48.16:862,48,0
chr10	70126438	.	CA	C	655.64	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.198;DP=701;FS=7.191;HRun=8;HaplotypeScore=65.2220;InbreedingCoeff=0.9309;MQ=67.97;MQ0=0;MQRankSum=0.308;QD=20.49;ReadPosRankSum=0.292;VQSLOD=3.4879;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:75.19:0,75,884	1/1:0,9:9:21.03:203,21,0	0/0:10,0:10:19.28:0,19,195	0/0:4,0:4:5.98:0,6,56	0/0:31,0:31:87.27:0,87,1050	0/0:35,0:35:99:0,99,1165	0/0:26,2:28:26.30:0,26,884	0/0:34,0:34:93.29:0,93,1122	0/0:21,0:21:51.16:0,51,616	0/0:31,0:31:69.20:0,69,818	0/0:31,0:31:90.22:0,90,1059	0/0:32,0:32:90.28:0,90,1087	0/0:31,0:31:81.24:0,81,965	0/0:23,0:23:63.19:0,63,761	0/0:32,0:31:84.23:0,84,985	0/0:29,0:29:75.23:0,75,905	0/0:21,0:21:48.15:0,48,580	1/1:3,20:23:60.08:573,60,0	0/0:23,0:23:54.13:0,54,618	0/0:32,0:32:84.24:0,84,1001	0/0:14,1:15:13.15:0,13,436	0/0:29,0:29:84.23:0,84,992	0/0:24,0:24:72.22:0,72,870	0/0:21,0:21:45.14:0,45,543	0/0:33,0:34:96.16:0,96,1137	0/0:31,0:31:93.28:0,93,1113	0/0:29,0:29:81.19:0,81,947	0/0:9,0:9:27.08:0,27,326
chr10	70126528	.	GTGTGTGTGTA	G	2089.75	PASS	AB=0.725;AC=11;AF=0.196;AN=56;BaseQRankSum=5.694;DP=743;FS=0.620;HRun=0;HaplotypeScore=223.4989;InbreedingCoeff=0.6028;MQ=61.97;MQ0=6;MQRankSum=-4.264;QD=13.84;ReadPosRankSum=-1.431;VQSLOD=1.8283;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:29:12.04:378,12,0	1/1:7,0:7:12.12:96,12,0	0/0:19,0:10:1.66:0,2,248	0/0:30,0:16:27.98:0,28,949	1/1:3,24:27:30.10:904,30,0	0/0:42,0:42:96.28:0,96,3890	0/0:25,0:25:56.26:0,56,2123	0/1:31,0:30:82.65:83,0,511	0/0:29,0:29:78.20:0,78,3211	0/0:37,0:37:99:0,99,4026	0/0:23,0:23:54.10:0,54,2311	0/0:36,0:36:96.31:0,96,4337	0/0:26,0:26:75.19:0,75,3069	0/0:32,0:32:87.23:0,87,3465	0/0:31,0:31:84.25:0,84,3643	0/0:18,0:18:51.14:0,51,1991	0/1:5,13:18:21.85:96,0,22	0/0:21,0:21:32.11:0,32,1597	0/0:22,0:22:45.12:0,45,952	0/0:23,0:23:39.13:0,39,1390	0/0:50,0:50:90.25:0,90,3515	0/0:29,0:29:81.22:0,81,3291	1/1:3,17:20:14.82:450,15,0	0/1:6,13:19:83.98:250,0,84	0/0:25,0:25:75.19:0,75,3108	0/0:37,0:37:99:0,102,2555	0/0:23,0:23:45.12:0,45,1330	0/0:14,0:14:15.05:0,15,505
chr10	70126536	.	GTA	G	1447.66	PASS	AB=0.964;AC=14;AF=0.250;AN=56;BaseQRankSum=9.416;DP=752;FS=4.577;HRun=0;HaplotypeScore=126.3085;InbreedingCoeff=0.7650;MQ=58.11;MQ0=9;MQRankSum=-3.042;QD=8.47;ReadPosRankSum=-4.422;VQSLOD=2.0632;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:14.76:95,15,0	1/1:7,0:6:13.50:97,13,0	0/0:23,0:8:4.64:0,5,141	0/0:32,0:14:17.17:0,17,408	1/1:25,0:25:29.02:174,29,0	0/0:40,0:40:84.52:0,85,1423	0/0:33,0:33:68.87:0,69,1061	1/1:3,29:31:86.80:867,87,0	0/0:28,0:28:81.10:0,81,1305	0/0:35,0:35:68.73:0,69,1507	0/0:21,0:21:56.94:0,57,899	0/0:35,0:35:99:0,102,1730	0/0:26,0:26:75.10:0,75,1158	0/0:30,0:30:87.16:0,87,1375	0/0:30,0:30:71.41:0,71,1371	0/0:20,0:20:48.33:0,48,774	1/1:16,0:16:11.85:83,12,0	0/1:24,2:26:99:192,0,167	0/0:19,0:19:28.21:0,28,383	0/0:26,0:26:43.79:0,44,372	0/0:56,0:55:68.51:0,69,897	0/0:29,0:29:69.60:0,70,1233	1/1:18,0:18:13.94:87,14,0	0/1:17,0:16:36.63:40,0,37	0/0:26,0:26:78.14:0,78,1218	0/0:37,0:37:79.76:0,80,966	0/0:24,0:24:44.93:0,45,452	0/0:11,0:11:14.94:0,15,134
chr10	70126538	.	A	ATGTG	4534.55	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-7.412;DP=766;FS=4.904;HRun=0;HaplotypeScore=147.4414;InbreedingCoeff=0.6598;MQ=56.55;MQ0=9;MQRankSum=0.546;QD=17.24;ReadPosRankSum=-0.123;VQSLOD=4.3737;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:15:0,15,139	0/0:6,0:5:3:0,3,26	0/0:23,0:7:3.01:0,3,48	0/0:32,0:14:22.71:0,23,340	0/0:24,0:24:19.91:0,20,201	0/0:38,0:40:75.21:0,75,1153	0/0:30,0:31:69.18:0,69,1014	0/1:33,0:32:55.92:56,0,119	0/0:29,0:29:69.20:0,69,1073	0/0:33,0:34:75.25:0,75,1203	0/0:21,0:21:45.13:0,45,700	0/0:35,0:35:89.28:0,89,1346	0/0:24,0:24:60.19:0,60,956	0/0:29,0:29:63.20:0,63,1017	0/0:27,0:28:78.24:0,78,1225	0/0:22,0:23:51.12:0,51,759	0/1:17,0:17:11.59:12,0,21	0/1:26,0:26:17.02:17,0,321	1/1:13,5:18:17.42:324,17,0	1/1:5,21:28:29.84:647,30,0	1/1:18,38:56:71.40:1589,71,0	0/0:27,0:29:66.22:0,66,1060	0/0:18,0:18:14.30:0,14,131	0/0:20,0:19:12.48:0,12,108	0/0:25,0:25:63.19:0,63,1002	1/1:19,19:40:15.95:1153,16,0	1/1:11,16:30:17.61:441,18,0	1/1:1,10:14:12.04:296,12,0
chr10	70127023	.	TA	T	5398.44	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.936;DP=629;FS=13.286;HRun=7;HaplotypeScore=64.5442;InbreedingCoeff=0.9966;MQ=82.95;MQ0=0;MQRankSum=-3.432;QD=25.71;ReadPosRankSum=-0.594;VQSLOD=4.1828;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,41:44:99:1131,111,0	1/1:0,12:12:33.07:337,33,0	0/0:24,0:24:47.79:0,48,633	0/0:14,0:15:36.01:0,36,415	1/1:2,26:28:72.16:734,72,0	0/0:23,0:23:60.18:0,60,742	0/0:22,0:22:51.14:0,51,626	1/1:4,33:37:99:993,99,0	0/0:16,0:16:48.15:0,48,604	0/0:22,0:22:48.14:0,48,583	0/0:25,0:25:72.22:0,72,894	0/0:19,0:19:57.18:0,57,716	0/0:28,0:28:78.25:0,78,978	0/0:19,0:19:57.18:0,57,716	0/0:23,0:23:69.22:0,69,868	0/0:20,0:20:60.19:0,60,754	1/1:2,25:27:72.16:734,72,0	1/1:1,21:22:60.14:612,60,0	0/0:29,0:29:87.28:0,87,1094	0/0:30,0:30:87.28:0,87,1093	0/0:16,0:16:45.14:0,45,566	0/0:16,0:16:48.15:0,48,604	1/1:1,28:29:63.14:643,63,0	1/1:2,9:11:21.05:214,21,0	0/0:22,0:22:60.19:0,60,755	0/0:23,0:23:63.20:0,63,790	0/0:21,0:20:63.20:0,63,792	0/0:6,0:6:15.05:0,15,189
chr10	70128520	.	CTCT	C	3670.92	PASS	AB=0.944;AC=20;AF=0.357;AN=56;BaseQRankSum=3.576;DP=589;FS=1.324;HRun=0;HaplotypeScore=92.0907;InbreedingCoeff=0.5213;MQ=65.40;MQ0=8;MQRankSum=0.409;QD=13.50;ReadPosRankSum=0.265;VQSLOD=3.3208;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,35:37:39.69:864,40,0	1/1:0,13:13:14.64:209,15,0	0/0:19,0:14:41.32:0,41,607	0/0:21,0:16:17.72:0,18,403	1/1:2,12:14:29.92:337,30,0	0/0:17,0:17:50.69:0,51,843	0/0:22,0:22:38.10:0,38,939	0/1:32,0:30:99:268,0,206	0/0:20,0:20:54.14:0,54,1032	0/0:26,0:25:62.91:0,63,1086	0/0:9,0:9:24.06:0,24,432	0/0:27,0:27:67.11:0,67,1284	0/0:25,0:23:68.55:0,69,1232	0/0:24,0:24:66.18:0,66,1175	0/0:34,0:34:99:0,99,1796	0/0:27,0:27:78.24:0,78,1598	1/1:4,22:27:31.15:655,31,0	1/1:3,12:15:21.07:337,21,0	0/1:9,6:14:97.32:151,0,97	0/1:8,0:7:33.05:33,0,86	0/1:36,0:36:41.71:42,0,628	0/0:20,0:20:54.10:0,54,1003	1/1:1,10:11:17.39:259,17,0	1/1:2,25:27:29.76:481,30,0	0/0:16,0:16:45.08:0,45,725	0/1:18,1:19:26.64:27,0,346	0/1:18,0:18:9.14:9,0,354	0/0:10,0:10:6.36:0,6,181
chr10	70129059	.	T	TC	7255.88	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-16.690;DP=848;FS=0.307;HRun=3;HaplotypeScore=77.5111;InbreedingCoeff=1.0000;MQ=82.98;MQ0=0;MQRankSum=-2.401;QD=37.40;ReadPosRankSum=0.779;VQSLOD=5.1955;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,38:44:99:1470,105,0	0/0:17,0:17:51.12:0,51,586	0/0:32,0:32:93.28:0,93,1095	0/0:24,0:24:60.02:0,60,663	1/1:2,30:32:87.29:1217,87,0	0/0:27,0:27:81.23:0,81,959	0/0:24,0:24:66.20:0,66,791	1/1:1,25:26:78.18:1018,78,0	0/0:29,0:29:84.23:0,84,985	0/0:44,0:44:99:0,129,1547	0/0:24,0:24:72.22:0,72,863	0/0:33,0:33:96.29:0,96,1152	0/0:32,0:32:84.23:0,84,984	0/0:33,0:33:99:0,99,1177	0/0:46,0:46:99:0,129,1526	0/0:32,0:32:87.26:0,87,1042	1/1:2,28:30:81.26:1118,81,0	0/0:19,0:19:51.16:0,51,612	0/0:23,0:23:63.19:0,63,754	0/0:27,0:27:81.21:0,81,938	0/0:41,0:41:99:0,111,1319	0/0:27,0:27:81.24:0,81,960	1/1:0,26:26:75.25:1047,75,0	1/1:2,34:36:99:1386,99,0	0/0:34,0:34:99:0,102,1212	0/0:33,0:33:96.29:0,96,1143	0/0:39,0:39:99:0,114,1355	0/0:14,0:14:42.11:0,42,491
chr10	70130493	.	GA	G	2401.80	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.123;DP=656;FS=1.208;HRun=10;HaplotypeScore=72.9822;InbreedingCoeff=0.9792;MQ=76.26;MQ0=0;MQRankSum=-0.910;QD=17.79;ReadPosRankSum=2.481;VQSLOD=4.4349;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.16:0,66,721	1/1:0,0:9:16.29:48,16,0	0/0:31,0:26:41.25:0,41,360	0/0:14,0:10:8.74:0,9,97	0/0:32,0:32:84.19:0,84,903	0/0:20,1:22:33.92:0,34,575	0/0:24,1:25:43.13:0,43,704	0/0:11,1:32:40.08:0,40,331	0/0:22,0:22:57.13:0,57,619	0/0:26,1:27:40.13:0,40,670	0/0:28,0:28:78.20:0,78,856	0/0:23,0:23:69.19:0,69,763	0/0:29,0:29:78.10:0,78,843	0/0:21,1:22:19.07:0,19,439	0/0:37,1:38:78.04:0,78,1073	0/0:26,1:27:46.20:0,46,722	0/0:21,0:22:56.96:0,57,600	0/0:10,0:11:32.11:0,32,310	1/1:4,15:20:43.99:366,44,0	1/1:2,29:32:72.62:715,73,0	1/1:3,13:16:38.99:339,39,0	0/0:25,1:26:49.14:0,49,763	0/0:28,0:29:78.04:0,78,844	0/0:20,0:20:54.13:0,54,589	0/0:16,1:18:24.92:0,25,486	1/1:6,20:26:29.79:488,30,0	1/1:4,24:28:35.38:539,35,0	1/1:0,4:4:12:104,12,0
chr10	70130878	.	A	ACTT	7678.01	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=-8.422;DP=815;FS=1.745;HRun=0;HaplotypeScore=133.1844;InbreedingCoeff=0.3140;MQ=72.93;MQ0=2;MQRankSum=-2.507;QD=20.15;ReadPosRankSum=-0.571;VQSLOD=4.4950;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:29:42.77:1198,43,0	0/1:7,0:7:44.46:44,0,64	0/0:22,0:20:38.13:0,38,432	0/0:27,0:27:55.54:0,56,683	1/1:2,33:36:96.15:1927,96,0	0/0:36,0:36:99:0,105,1434	0/0:24,0:24:60.07:0,60,787	0/1:39,0:39:99:376,0,99	0/0:26,0:26:72.19:0,72,1016	0/0:32,0:32:84.18:0,84,1063	0/0:31,0:31:73.89:0,74,1049	0/0:31,0:31:84.20:0,84,1160	0/0:39,0:39:99:0,99,1368	0/0:33,0:33:87.28:0,87,1309	0/0:32,0:32:87.11:0,87,1132	0/0:38,0:38:99:0,99,1415	1/1:5,26:31:58.50:1277,58,0	0/0:15,0:15:0.05:0,0,185	0/1:26,0:26:53.57:383,0,54	0/1:31,0:31:39.62:40,0,330	0/1:32,0:32:99:123,0,234	0/0:26,0:26:69.08:0,69,843	1/1:5,21:29:34.78:994,35,0	1/1:5,17:22:42.14:895,42,0	0/0:22,0:22:63.11:0,63,833	0/1:42,0:42:99:215,0,286	0/1:41,0:40:99:112,0,359	0/1:16,0:16:94.47:94,0,103
chr10	70131392	.	T	TC	438.73	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.737;DP=706;FS=0.000;HRun=4;HaplotypeScore=66.2967;InbreedingCoeff=0.9999;MQ=82.55;MQ0=0;MQRankSum=-2.376;QD=31.34;ReadPosRankSum=-0.367;VQSLOD=3.7546;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.21:0,72,817	1/1:1,13:14:39.13:534,39,0	0/0:21,0:21:56.70:0,57,639	0/0:18,0:18:51.12:0,51,563	0/0:28,0:28:84.22:0,84,943	0/0:33,0:33:96.27:0,96,1089	0/0:22,0:22:63.18:0,63,715	0/0:37,0:36:99:0,105,1162	0/0:16,0:16:48.14:0,48,544	0/0:21,0:21:54.14:0,54,605	0/0:23,0:23:63.18:0,63,715	0/0:21,0:21:63.16:0,63,704	0/0:27,0:27:78.21:0,78,875	0/0:32,0:32:90.26:0,90,1021	0/0:29,0:29:84.24:0,84,953	0/0:27,0:27:72.20:0,72,817	0/0:38,0:38:99:0,114,1282	0/0:16,0:16:45.09:0,45,496	0/0:21,0:21:60.15:0,60,668	0/0:31,0:31:90.24:0,90,1010	0/0:29,0:29:87.25:0,87,987	0/0:25,0:25:63.18:0,63,715	0/0:33,0:33:93.23:0,93,1036	0/0:15,0:15:42.12:0,42,476	0/0:31,0:30:87.25:0,87,987	0/0:25,0:25:72.21:0,72,817	0/0:31,0:31:87.25:0,87,987	0/0:17,0:17:48.14:0,48,544
chr10	70134569	.	GA	G	425.22	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.838;DP=645;FS=8.299;HRun=7;HaplotypeScore=60.7213;InbreedingCoeff=0.9974;MQ=81.35;MQ0=0;MQRankSum=-3.125;QD=20.25;ReadPosRankSum=0.947;VQSLOD=2.8541;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.25:0,81,1006	0/0:10,0:10:30.09:0,30,365	0/0:19,0:19:49.70:0,50,586	0/0:18,0:18:39.04:0,39,468	0/0:25,0:25:63.18:0,63,768	0/0:27,0:27:81.21:0,81,980	0/0:27,0:27:78.24:0,78,970	0/0:25,0:25:63.18:0,63,759	0/0:19,0:19:51.16:0,51,642	0/0:23,0:23:66.21:0,66,830	0/0:25,0:25:63.19:0,63,780	0/0:31,0:31:90.27:0,90,1107	0/0:18,0:18:51.16:0,51,630	0/0:22,0:22:63.18:0,63,778	0/0:31,0:31:78.25:0,78,981	0/0:26,0:26:69.19:0,69,832	0/0:28,0:28:81.23:0,81,1003	1/1:1,20:21:51.11:520,51,0	0/0:23,0:23:60.16:0,60,720	0/0:29,0:29:78.22:0,78,946	0/0:24,0:24:57.18:0,57,717	0/0:22,0:22:63.19:0,63,781	0/0:26,0:26:63.17:0,63,754	0/0:10,0:10:27.07:0,27,327	0/0:33,0:33:96.31:0,96,1208	0/0:25,0:25:72.22:0,72,895	0/0:18,0:18:54.17:0,54,679	0/0:10,0:10:27.09:0,27,340
chr10	70135104	.	GACAGAGGAAAGCCATAA	G	8378.21	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.270;DP=692;FS=0.000;HRun=0;HaplotypeScore=312.5428;InbreedingCoeff=0.9887;MQ=86.76;MQ0=0;MQRankSum=-12.444;QD=71.61;ReadPosRankSum=1.042;VQSLOD=3.8030;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,29:40:63.22:3103,63,0	0/0:13,0:13:39.13:0,39,2914	0/0:27,0:27:78.09:0,78,4383	0/0:25,0:25:72.25:0,72,4345	1/1:3,17:20:36.59:1651,37,0	0/0:27,0:27:81.28:0,81,6130	0/0:29,0:29:87.30:0,87,6513	0/0:30,0:30:87.29:0,87,5909	0/0:26,0:26:78.27:0,78,6127	0/0:22,0:22:63.22:0,63,4983	0/0:13,0:13:39.12:0,39,2721	0/0:25,0:25:75.24:0,75,5603	0/0:33,0:33:99:0,99,7792	0/0:24,0:24:72.23:0,72,5381	0/0:34,0:34:99:0,102,7776	0/0:34,0:34:93.31:0,93,6422	1/1:8,8:16:15.05:739,15,0	0/0:17,0:17:48.16:0,48,3774	0/0:17,0:17:48.15:0,48,3149	0/0:27,0:27:81.26:0,81,5857	0/0:46,0:46:99:0,132,9590	0/0:18,0:18:54.19:0,54,4168	1/1:6,15:21:36.12:1773,36,0	1/1:7,13:20:24.97:1113,25,0	0/0:33,0:33:96.29:0,96,6606	0/0:25,0:25:75.25:0,75,5985	0/0:26,0:26:72.23:0,72,5467	0/0:4,0:4:12.04:0,12,789
chr10	70135267	.	ATATAG	A	245.94	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.738;DP=562;FS=1.835;HRun=0;HaplotypeScore=102.8581;InbreedingCoeff=0.9514;MQ=87.56;MQ0=0;MQRankSum=-3.752;QD=40.99;ReadPosRankSum=1.910;VQSLOD=3.9120;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.13:0,63,1779	0/0:10,0:10:30.10:0,30,967	0/0:23,0:23:63.16:0,63,1748	0/0:21,0:21:54.18:0,54,1608	0/0:27,0:27:81.28:0,81,2560	0/0:20,0:20:57.16:0,57,1694	0/0:11,0:11:30.10:0,30,969	0/0:32,0:32:93.32:0,93,2944	0/0:22,0:22:63.22:0,63,2035	0/0:25,0:25:75.26:0,75,2424	0/0:20,0:20:57.20:0,57,1819	0/0:28,0:28:81.26:0,81,2537	0/0:21,0:21:63.22:0,63,2018	0/0:28,0:28:84.27:0,84,2596	0/0:25,0:25:75.26:0,75,2400	0/0:26,0:26:78.25:0,78,2402	0/0:27,0:27:78.27:0,78,2459	1/1:1,5:6:15.05:334,15,0	0/0:16,0:16:42.14:0,42,1311	0/0:20,0:20:57.20:0,57,1829	0/0:8,0:8:24.08:0,24,775	0/0:13,0:13:39.13:0,39,1182	0/0:16,0:16:48.16:0,48,1493	0/0:17,0:17:42.10:0,42,1280	0/0:22,0:22:66.20:0,66,2059	0/0:25,0:25:75.25:0,75,2351	0/0:26,0:26:78.18:0,78,2387	0/0:4,0:4:12.04:0,12,368
chr10	70135537	.	C	CGTGGGTT	1813.30	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.077;DP=673;FS=4.554;HRun=0;HaplotypeScore=156.7133;InbreedingCoeff=0.9916;MQ=78.11;MQ0=1;MQRankSum=-6.552;QD=82.42;ReadPosRankSum=0.204;VQSLOD=4.0983;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,148,3883	1/1:0,5:5:15.05:537,15,0	0/0:20,0:19:40.05:0,40,1210	0/0:30,0:30:87.28:0,87,1916	0/0:24,0:24:60.19:0,60,1516	0/0:29,0:29:78.27:0,78,2096	0/0:26,0:26:69.24:0,69,1788	0/0:27,0:27:75.25:0,75,1946	0/0:31,0:31:90.30:0,90,2369	0/0:19,0:18:54.19:0,54,1428	0/0:16,0:16:48.16:0,48,1294	0/0:22,0:22:57.20:0,57,1529	0/0:24,0:24:63.22:0,63,1683	0/0:31,0:31:90.31:0,90,2354	0/0:30,0:29:81.24:0,81,2008	0/0:19,0:19:54.19:0,54,1456	0/0:37,0:37:99:0,111,2972	1/1:9,6:16:39.13:1395,39,0	0/0:14,0:14:42.14:0,42,1091	0/0:14,0:14:42.14:0,42,1132	0/0:27,0:27:75.21:0,75,1888	0/0:16,0:16:45.15:0,45,1164	0/0:16,0:16:42.14:0,42,1124	0/0:39,0:39:99:0,117,2995	0/0:22,0:22:66.23:0,66,1771	0/0:28,0:28:75.26:0,75,2013	0/0:28,0:28:81.26:0,81,2088	0/0:12,0:12:36.12:0,36,913
chr10	70136936	.	CAG	C	454.45	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.748;DP=760;FS=3.964;HRun=0;HaplotypeScore=99.6001;InbreedingCoeff=0.9998;MQ=82.86;MQ0=0;MQRankSum=-3.248;QD=34.96;ReadPosRankSum=-0.730;VQSLOD=5.5559;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,2271	1/1:0,13:13:36.12:549,36,0	0/0:24,0:25:70.86:0,71,1232	0/0:23,0:23:52.51:0,53,992	0/0:32,0:32:90.31:0,90,1677	0/0:41,0:41:99:0,120,2304	0/0:16,0:16:48.16:0,48,927	0/0:28,0:28:84.29:0,84,1619	0/0:19,0:19:57.17:0,57,1026	0/0:31,0:31:93.31:0,93,1723	0/0:24,0:24:63.22:0,63,1191	0/0:23,0:23:69.24:0,69,1332	0/0:38,0:38:99:0,114,2120	0/0:33,0:33:99:0,99,1912	0/0:33,0:33:96.29:0,96,1754	0/0:27,0:27:78.27:0,78,1497	0/0:24,0:24:72.25:0,72,1377	0/0:16,0:16:48.16:0,48,915	0/0:33,0:33:96.32:0,96,1814	0/0:35,0:35:99:0,102,1862	0/0:38,0:38:99:0,105,1991	0/0:22,0:22:63.22:0,63,1186	0/0:31,0:31:90.31:0,90,1713	0/0:18,0:18:54.16:0,54,1008	0/0:23,0:23:66.23:0,66,1266	0/0:30,0:30:87.29:0,87,1628	0/0:29,0:29:84.27:0,84,1565	0/0:14,0:14:39.13:0,39,753
chr10	70137589	.	AGTGGTTTG	A	4806.75	PASS	AB=0.552;AC=11;AF=0.196;AN=56;BaseQRankSum=11.085;DP=605;FS=46.125;HRun=0;HaplotypeScore=159.7258;InbreedingCoeff=0.8424;MQ=81.29;MQ0=0;MQRankSum=-9.484;QD=54.01;ReadPosRankSum=1.024;VQSLOD=2.5792;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.27:0,84,3471	0/0:12,0:12:36.12:0,36,1535	0/0:22,0:22:56.82:0,57,2048	0/0:23,0:23:56.51:0,57,1963	0/0:31,0:31:90.31:0,90,3641	0/0:15,0:15:45.15:0,45,1825	0/0:32,0:32:96.33:0,96,3882	0/0:27,0:27:75.26:0,75,3171	0/0:15,0:15:45.15:0,45,1983	0/0:23,0:23:69.24:0,69,2861	0/0:21,0:21:60.19:0,60,2341	0/0:28,0:28:78.27:0,78,3415	0/0:20,0:20:57.20:0,57,2522	0/0:23,0:23:69.24:0,69,2915	0/0:25,0:25:75.24:0,75,2993	0/0:21,0:21:57.20:0,57,2293	0/0:33,0:33:93.28:0,93,3732	0/0:20,0:20:60.20:0,60,2561	1/1:5,17:22:48.11:1234,48,0	1/1:3,18:21:36.12:1018,36,0	1/1:5,12:17:15.99:426,16,0	0/0:22,0:22:63.22:0,63,2642	0/0:20,0:20:57.20:0,57,2271	0/0:30,0:30:87.30:0,87,3657	0/0:22,0:22:66.23:0,66,2922	0/1:3,13:16:99:1025,0,221	1/1:0,12:12:36.12:1018,36,0	1/1:0,1:1:3.01:85,3,0
chr10	70137921	.	CCTT	C	979.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.212;DP=753;FS=0.816;HRun=0;HaplotypeScore=106.3391;InbreedingCoeff=0.9988;MQ=82.28;MQ0=0;MQRankSum=-2.428;QD=37.66;ReadPosRankSum=0.922;VQSLOD=4.5190;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,2528	0/0:15,0:15:42.14:0,42,968	0/0:26,0:26:52.42:0,52,1271	0/0:27,0:27:68.44:0,68,1407	0/0:26,0:26:75.01:0,75,1621	0/0:23,0:23:63.19:0,63,1326	0/0:30,0:30:87.30:0,87,1971	0/0:28,0:28:75.26:0,75,1713	0/0:30,0:30:84.29:0,84,1920	0/0:23,0:23:69.24:0,69,1582	0/0:16,0:16:48.16:0,48,1046	0/0:38,0:38:99:0,114,2519	0/0:35,0:35:99:0,102,2217	0/0:22,0:22:60.21:0,60,1384	0/0:39,0:39:99:0,117,2601	0/0:39,0:39:99:0,114,2507	0/0:25,0:25:72.25:0,72,1640	1/1:0,26:26:63.22:1074,63,0	0/0:14,0:14:39.12:0,39,824	0/0:17,0:17:48.04:0,48,975	0/0:37,0:37:99:0,105,2366	0/0:14,0:14:39.13:0,39,876	0/0:23,0:23:66.21:0,66,1457	0/0:43,0:43:99:0,129,2911	0/0:17,0:17:45.15:0,45,1032	0/0:32,0:32:93.27:0,93,1943	0/0:40,0:39:99:0,120,2587	0/0:9,0:9:27.09:0,27,622
chr10	70138652	.	AT	A	812.14	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.509;DP=711;FS=1.600;HRun=2;HaplotypeScore=68.0829;InbreedingCoeff=0.9988;MQ=83.02;MQ0=0;MQRankSum=-1.836;QD=29.01;ReadPosRankSum=1.838;VQSLOD=3.3632;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,156,2294	1/1:1,8:9:24.08:311,24,0	0/0:24,0:24:47.23:0,47,865	0/0:21,0:21:50.26:0,50,712	0/0:28,0:28:84.27:0,84,1238	0/0:28,0:28:81.26:0,81,1191	0/0:19,0:19:57.17:0,57,798	0/0:40,0:40:99:0,117,1610	0/0:23,0:23:66.20:0,66,949	0/0:23,0:23:69.23:0,69,1031	0/0:22,0:22:60.16:0,60,807	0/0:19,0:19:57.17:0,57,810	0/0:41,0:41:99:0,123,1776	0/0:28,0:28:84.23:0,84,1176	0/0:24,0:24:69.22:0,69,1013	0/0:21,0:21:63.17:0,63,867	0/0:29,0:29:87.27:0,87,1264	1/1:1,18:19:48.16:622,48,0	0/0:30,0:30:84.21:0,84,1152	0/0:21,0:21:60.20:0,60,898	0/0:20,0:20:60.15:0,60,852	0/0:22,0:22:63.17:0,63,916	0/0:20,0:20:57.18:0,57,833	0/0:23,0:23:69.17:0,69,968	0/0:23,0:23:69.21:0,69,996	0/0:42,0:42:99:0,120,1710	0/0:29,0:29:84.25:0,84,1214	0/0:11,0:11:33.11:0,33,494
chr10	70138966	.	CACA	C	1428.69	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.065;DP=728;FS=5.384;HRun=0;HaplotypeScore=99.7220;InbreedingCoeff=0.9996;MQ=76.84;MQ0=0;MQRankSum=-4.582;QD=37.60;ReadPosRankSum=-0.808;VQSLOD=4.1806;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:84.21:0,84,1825	1/1:0,12:12:30.10:529,30,0	0/0:20,0:20:54.95:0,55,1216	0/0:24,0:24:39.93:0,40,1166	0/0:30,0:30:90.30:0,90,2082	0/0:32,0:32:93.32:0,93,2194	0/0:21,0:21:60.19:0,60,1372	0/0:34,0:34:99:0,102,2365	0/0:38,0:38:99:0,108,2507	0/0:21,0:21:63.22:0,63,1470	0/0:20,0:20:60.21:0,60,1418	0/0:43,0:43:99:0,129,2969	0/0:38,0:38:99:0,111,2532	0/0:30,0:30:90.29:0,90,2072	0/0:31,0:31:93.31:0,93,2153	0/0:36,0:36:99:0,99,2319	0/0:18,0:18:54.16:0,54,1184	1/1:2,24:26:60.14:1021,60,0	0/0:24,0:24:72.25:0,72,1679	0/0:28,0:28:84.26:0,84,1871	0/0:25,0:25:75.24:0,75,1701	0/0:18,0:18:54.19:0,54,1276	0/0:17,0:17:51.18:0,51,1184	0/0:22,0:22:63.22:0,63,1488	0/0:20,0:20:60.19:0,60,1352	0/0:30,0:30:90.29:0,90,2022	0/0:30,0:29:87.16:0,87,1996	0/0:12,0:12:33.11:0,33,780
chr10	70139220	.	A	AT	589.21	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.007;DP=551;FS=3.306;HRun=5;HaplotypeScore=54.1308;InbreedingCoeff=0.9962;MQ=72.05;MQ0=0;MQRankSum=-1.928;QD=31.01;ReadPosRankSum=0.601;VQSLOD=4.2261;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.16:0,63,677	1/1:0,10:10:27.09:355,27,0	0/0:13,0:12:32.91:0,33,337	0/0:13,0:12:22.84:0,23,219	0/0:35,0:34:99:0,102,1096	0/0:13,0:13:36.06:0,36,375	0/0:12,0:12:36.09:0,36,387	0/0:31,0:31:87.20:0,87,923	0/0:19,0:19:54.12:0,54,572	0/0:28,0:28:78.18:0,78,826	0/0:29,0:29:81.16:0,81,849	0/0:16,0:16:45.09:0,45,474	0/0:22,0:22:63.12:0,63,654	0/0:14,0:14:39.10:0,39,419	0/0:18,0:18:54.12:0,54,572	0/0:13,0:13:33.08:0,33,354	0/0:18,0:18:54.14:0,54,580	1/1:0,9:9:27.09:355,27,0	0/0:17,0:17:45.10:0,45,476	0/0:40,0:40:99:0,120,1290	0/0:10,0:10:27.07:0,27,290	0/0:17,0:17:51.11:0,51,539	0/0:19,0:19:54.14:0,54,580	0/0:10,0:10:30.08:0,30,322	0/0:25,0:25:60.12:0,60,629	0/0:29,0:29:87.19:0,87,919	0/0:34,0:34:99:0,102,1076	0/0:15,0:15:33.08:0,33,355
chr10	70141519	.	G	GAA	13500.47	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=13.132;DP=788;FS=2.309;HRun=8;HaplotypeScore=160.2926;InbreedingCoeff=0.9991;MQ=67.12;MQ0=1;MQRankSum=-4.911;QD=36.59;ReadPosRankSum=-0.701;VQSLOD=3.0359;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,23:28:63.21:998,63,0	1/1:1,1:9:21.04:219,21,0	0/0:15,0:14:27.52:0,28,298	0/0:14,0:15:26.18:0,26,265	1/1:7,31:38:96.16:1400,96,0	0/0:29,0:29:78.16:0,78,851	0/0:18,0:18:48.07:0,48,505	1/1:11,16:29:59.16:843,59,0	0/0:27,0:27:78.19:0,78,861	0/0:33,0:33:90.24:0,90,1003	0/0:28,0:28:69.14:0,69,752	0/0:30,0:30:84.20:0,84,927	0/0:27,0:27:81.20:0,81,892	0/0:31,0:32:68.94:0,69,817	0/0:31,0:31:84.18:0,84,915	0/0:39,0:39:96.17:0,96,1033	1/1:1,17:21:55.48:759,55,0	0/0:18,0:17:45.11:0,45,502	1/1:3,11:14:33.04:494,33,0	1/1:8,34:44:99:1714,114,0	1/1:5,17:23:54.18:856,54,0	0/0:48,0:48:99:0,123,1362	1/1:10,35:46:99:1702,114,0	1/1:4,14:18:36.27:534,36,0	0/0:29,0:29:81.16:0,81,875	1/1:8,37:47:99:1745,123,0	1/1:6,26:34:92.29:1380,92,0	1/1:0,18:18:54.18:857,54,0
chr10	70141544	.	ATGTG	A	3161.26	PASS	AB=0.852;AC=19;AF=0.339;AN=56;BaseQRankSum=11.474;DP=833;FS=20.508;HRun=0;HaplotypeScore=247.7071;InbreedingCoeff=0.4359;MQ=59.63;MQ0=6;MQRankSum=-0.989;QD=8.68;ReadPosRankSum=-0.219;VQSLOD=1.2441;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,3:31:27.15:189,27,0	0/1:12,0:12:48.93:49,0,90	0/0:19,0:18:47.24:0,47,569	0/0:24,0:20:48:0,48,546	1/1:20,7:27:32.94:276,33,0	0/0:28,0:28:81.09:0,81,1397	0/0:15,0:15:36.07:0,36,716	1/1:32,1:31:78.07:734,78,0	0/0:25,0:25:75.13:0,75,1514	0/0:44,0:44:99:0,126,2341	0/0:27,0:27:78.20:0,78,1850	0/0:33,0:33:87.14:0,87,1693	0/0:37,0:37:99:0,108,2349	0/0:31,0:31:84.16:0,84,1735	0/0:38,0:38:81.23:0,81,2193	0/0:36,0:36:99:0,102,2124	1/1:17,2:18:26.39:202,26,0	0/0:24,0:23:32.17:0,32,522	0/1:17,1:17:64.25:239,0,64	0/1:35,8:43:99:221,0,254	0/1:22,6:28:99:127,0,211	0/0:53,0:53:99:0,126,3031	1/1:39,7:46:47.19:411,47,0	1/1:14,3:17:11.32:93,11,0	0/0:35,0:35:99:0,99,1929	0/1:33,8:42:99:368,0,291	0/1:28,8:36:99:249,0,270	0/1:6,4:12:23.21:200,0,23
chr10	70141546	.	GTGTGTGTA	G	3751.35	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=8.869;DP=844;FS=14.383;HRun=0;HaplotypeScore=307.0536;InbreedingCoeff=0.4314;MQ=58.82;MQ0=6;MQRankSum=-1.102;QD=10.25;ReadPosRankSum=-2.172;VQSLOD=0.7726;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,6:31:14.53:297,15,0	0/1:12,0:12:28.74:29,0,246	0/0:19,0:18:47.25:0,47,704	0/0:23,0:19:48.04:0,48,667	1/1:13,13:27:32.73:324,33,0	0/0:28,0:28:81.09:0,81,2082	0/0:16,0:16:39.09:0,39,1180	1/1:33,0:31:78.12:1027,78,0	0/0:27,0:27:81.17:0,81,2549	0/0:44,0:44:99:0,129,3788	0/0:27,0:27:78.22:0,78,2938	0/0:34,0:34:90.16:0,90,2756	0/0:37,0:37:99:0,108,3850	0/0:32,0:32:90.19:0,90,3042	0/0:38,0:38:99:0,105,3756	0/0:36,0:36:99:0,105,3547	1/1:18,1:18:26.68:334,27,0	0/0:23,0:24:17.23:0,17,704	0/1:19,0:17:99:232,0,325	0/1:44,0:44:99:143,0,1057	0/1:29,0:29:99:119,0,598	0/0:55,0:55:99:0,159,5336	1/1:21,24:45:47.99:602,48,0	1/1:11,5:17:11.36:93,11,0	0/0:37,0:37:99:0,105,3165	0/1:42,0:42:99:274,0,1021	0/1:34,0:35:99:178,0,869	0/1:12,0:13:99:99,0,230
chr10	70141548	.	G	GTA	1569.29	PASS	AB=0.887;AC=10;AF=0.179;AN=56;BaseQRankSum=8.674;DP=853;FS=21.862;HRun=0;HaplotypeScore=231.0128;InbreedingCoeff=-0.2210;MQ=58.77;MQ0=7;MQRankSum=-0.585;QD=5.18;ReadPosRankSum=-3.529;VQSLOD=1.3134;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,1:32:69.77:72,0,70	0/0:12,0:12:13.15:0,13,72	0/0:19,0:18:54.17:0,54,789	0/0:23,0:19:48.08:0,48,641	0/1:28,0:28:19.18:19,0,115	0/0:29,0:29:84.25:0,84,1236	0/0:17,0:17:42.09:0,42,595	0/0:33,0:30:18.06:0,18,348	0/0:28,0:28:81.24:0,81,1191	0/0:44,0:44:99:0,129,1868	0/0:27,0:27:78.26:0,78,1190	0/0:34,0:34:90.27:0,90,1330	0/0:37,0:37:99:0,111,1644	0/0:31,0:31:90.24:0,90,1280	0/0:44,0:44:99:0,111,1596	0/0:35,0:35:99:0,105,1497	0/0:18,0:17:2.21:0,2,143	0/0:25,0:24:58.75:0,59,700	0/1:18,3:18:83.63:84,0,167	0/1:23,22:45:99:427,0,139	0/1:22,6:28:66.97:223,0,67	0/0:56,0:56:99:0,162,2266	0/1:43,0:43:4.51:5,0,169	0/1:17,0:17:24.85:33,0,25	0/0:38,0:38:99:0,105,1519	0/1:31,10:41:99:459,0,212	0/1:22,13:35:99:339,0,219	0/1:13,0:13:49.25:49,0,154
chr10	70141550	.	G	GTA	1592.81	PASS	AB=0.848;AC=7;AF=0.125;AN=56;BaseQRankSum=7.275;DP=859;FS=14.502;HRun=0;HaplotypeScore=231.6618;InbreedingCoeff=-0.1538;MQ=58.64;MQ0=7;MQRankSum=-3.439;QD=7.41;ReadPosRankSum=-1.912;VQSLOD=1.3357;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:7.22:0,7,113	0/0:12,0:12:10.88:0,11,61	0/0:19,0:18:54.17:0,54,770	0/0:21,0:17:42.09:0,42,582	0/0:28,0:28:25.40:0,25,151	0/0:28,0:28:81.26:0,81,1199	0/0:17,0:17:42.10:0,42,590	0/0:30,0:27:71.65:0,72,392	0/0:30,0:30:90.23:0,90,1259	0/0:43,0:43:99:0,129,1852	0/0:29,0:29:84.26:0,84,1238	0/0:35,0:35:96.27:0,96,1370	0/0:38,0:38:99:0,114,1660	0/0:31,0:31:93.23:0,93,1298	0/0:43,0:44:99:0,117,1625	0/0:36,0:36:99:0,102,1464	0/0:18,0:17:26.30:0,26,184	0/1:25,0:24:28.63:29,0,454	0/1:22,0:22:99:143,0,132	0/1:23,22:45:95.53:482,0,96	0/1:24,6:30:99:213,0,117	0/0:53,0:55:99:0,162,2242	0/0:42,0:42:43.13:0,43,239	0/0:16,0:16:5.27:0,5,33	0/0:39,0:39:99:0,105,1508	0/1:32,10:42:99:487,0,178	0/1:22,13:35:99:318,0,201	0/1:13,0:13:50.99:51,0,137
chr10	70141570	.	A	ATG	450.94	PASS	AB=0.957;AC=11;AF=0.196;AN=56;BaseQRankSum=11.233;DP=912;FS=5.469;HRun=0;HaplotypeScore=226.3413;InbreedingCoeff=-0.1086;MQ=52.20;MQ0=14;MQRankSum=0.071;QD=1.46;ReadPosRankSum=5.832;VQSLOD=1.7531;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,3:36:11.61:12,0,319	0/0:13,0:11:11.94:0,12,106	0/0:16,0:12:33.10:0,33,443	0/0:21,0:15:36.04:0,36,459	0/1:25,2:27:3.02:3,0,183	0/0:24,0:24:66.19:0,66,905	0/0:22,0:22:57.19:0,57,806	0/1:44,6:43:99:298,0,929	0/0:34,0:34:96.29:0,96,1335	0/0:52,0:51:99:0,144,2014	0/0:31,0:31:93.31:0,93,1332	0/0:33,0:33:87.25:0,87,1191	0/0:40,0:40:99:0,117,1617	0/0:34,0:34:93.31:0,93,1328	0/0:48,0:48:99:0,126,1763	0/0:37,0:37:99:0,108,1544	0/1:16,3:18:77.01:77,0,126	0/0:23,0:22:44.13:0,44,511	0/0:30,0:27:26.30:0,26,700	0/1:39,0:39:84.71:85,0,334	0/1:31,0:31:19.38:19,0,425	0/0:60,0:60:99:0,175,2431	0/0:39,1:40:26.78:0,27,286	1/1:12,3:15:0.45:1,0,0	0/0:46,0:46:99:0,126,1767	0/1:49,0:49:21.06:21,0,944	0/1:35,0:35:62.38:62,0,511	0/1:7,0:7:5.26:5,0,188
chr10	70141582	.	A	ATGTGTG	645.98	PASS	AB=0.996;AC=13;AF=0.232;AN=56;BaseQRankSum=9.823;DP=917;FS=5.763;HRun=0;HaplotypeScore=280.1364;InbreedingCoeff=-0.1121;MQ=52.43;MQ0=12;MQRankSum=1.106;QD=1.74;ReadPosRankSum=1.317;VQSLOD=1.4004;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:37:2.15:2,0,255	1/1:5,7:11:9.03:314,9,0	0/0:15,0:11:21.07:0,21,416	0/0:18,0:12:30.10:0,30,565	0/1:30,0:30:18.13:18,0,143	0/0:20,0:20:57.20:0,57,1255	0/0:22,0:22:54.05:0,54,1126	0/1:62,0:55:90.04:90,0,403	0/0:30,0:30:84.26:0,84,1790	0/0:51,0:50:99:0,144,3019	0/0:33,0:33:93.31:0,93,1991	0/0:35,0:35:99:0,102,2070	0/0:40,0:40:99:0,114,2453	0/0:38,0:38:99:0,108,2207	0/0:52,0:52:99:0,111,2996	0/0:37,0:37:99:0,99,2180	0/0:19,0:19:8.02:0,8,244	0/1:20,0:22:59.96:60,0,367	0/1:26,0:26:91.26:91,0,725	0/1:37,0:37:54.32:54,0,283	0/0:35,0:35:6.77:0,7,811	0/0:60,0:60:99:0,172,3589	0/1:38,0:38:34.50:35,0,206	0/1:18,0:19:14.49:14,0,20	0/0:40,0:40:99:0,105,2275	0/1:45,0:46:79.92:80,0,1029	0/1:34,0:35:26.87:27,0,615	0/1:5,0:5:13.49:13,0,31
chr10	70141584	.	G	GTA	880.09	PASS	AB=0.979;AC=9;AF=0.161;AN=56;BaseQRankSum=13.218;DP=909;FS=0.000;HRun=0;HaplotypeScore=208.9325;InbreedingCoeff=0.0409;MQ=52.76;MQ0=13;MQRankSum=0.950;QD=4.11;ReadPosRankSum=2.371;VQSLOD=2.6402;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:45.43:0,45,512	1/1:13,0:11:7.67:30,8,0	0/0:16,0:11:30.06:0,30,405	0/0:19,0:13:36.11:0,36,498	0/0:29,0:29:36.08:0,36,455	0/0:21,0:21:60.19:0,60,894	0/0:20,0:20:54.18:0,54,824	0/0:62,0:55:99:0,100,1537	0/0:32,0:32:90.27:0,90,1330	0/0:49,0:48:99:0,144,2192	0/0:33,0:33:96.31:0,96,1443	0/0:36,0:36:99:0,105,1577	0/0:41,0:41:99:0,114,1739	0/0:39,0:39:99:0,117,1703	0/0:53,0:53:99:0,140,2109	0/0:36,0:36:99:0,105,1560	0/0:19,0:19:26.02:0,26,309	0/1:19,4:22:99:215,0,372	0/1:22,0:21:60.25:60,0,598	0/1:37,0:37:99:206,0,260	0/1:36,0:36:41.26:41,0,623	0/0:59,0:59:99:0,172,2587	0/0:36,0:36:33.55:0,34,415	0/0:18,0:18:17.54:0,18,173	0/0:40,0:40:99:0,111,1653	0/1:46,0:46:99:257,0,806	0/1:34,0:34:99:189,0,465	0/1:3,0:3:22.96:23,0,27
chr10	70142477	.	TCA	T	4808.63	PASS	AB=0.733;AC=25;AF=0.446;AN=56;BaseQRankSum=11.564;DP=600;FS=5.234;HRun=0;HaplotypeScore=86.6011;InbreedingCoeff=0.7036;MQ=63.41;MQ0=11;MQRankSum=0.226;QD=16.64;ReadPosRankSum=0.246;VQSLOD=4.0933;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,12:28:41.81:471,42,0	1/1:1,5:6:9.03:107,9,0	0/0:26,1:8:6.02:0,6,88	0/0:21,0:9:11.93:0,12,134	1/1:4,12:16:20.90:229,21,0	0/0:20,0:21:36.58:0,37,659	0/0:27,1:29:9.99:0,10,706	1/1:14,0:40:14.16:221,14,0	0/0:26,0:26:63.21:0,63,998	0/0:14,0:14:34.93:0,35,522	0/0:18,0:18:39.10:0,39,563	0/0:27,0:27:66.22:0,66,1026	0/0:20,0:20:51.13:0,51,746	0/0:28,0:28:57.19:0,57,886	0/0:27,0:27:53.90:0,54,795	0/0:22,0:22:39.13:0,39,601	1/1:9,9:19:6.08:428,6,0	0/1:14,0:14:63.59:74,0,64	1/1:7,11:19:35.72:372,36,0	1/1:4,14:18:33.10:392,33,0	1/1:6,34:40:69.21:823,69,0	0/0:13,0:13:11.25:0,11,518	1/1:2,4:6:9.03:107,9,0	0/1:7,15:21:44.40:387,0,44	0/0:18,0:18:30.09:0,30,446	0/1:9,16:26:99:489,0,125	1/1:6,18:25:47.97:542,48,0	1/1:1,7:8:5.90:167,6,0
chr10	70142498	.	CAT	C	1158.69	PASS	AB=0.967;AC=17;AF=0.304;AN=56;BaseQRankSum=14.870;DP=668;FS=21.087;HRun=0;HaplotypeScore=103.4216;InbreedingCoeff=-0.1085;MQ=59.80;MQ0=12;MQRankSum=-0.171;QD=3.41;ReadPosRankSum=7.519;VQSLOD=0.0592;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:13.76:135,14,0	1/1:5,0:5:8.23:35,8,0	0/0:43,0:15:17.55:0,18,232	0/1:30,0:17:8.31:8,0,257	0/1:21,0:20:34.18:34,0,126	0/0:28,0:28:60.33:0,60,877	0/0:27,0:27:50.28:0,50,754	0/1:41,0:40:99:110,0,312	0/0:25,0:25:75.16:0,75,1241	0/0:25,0:25:60.09:0,60,878	0/0:17,0:17:47.75:0,48,690	0/0:32,0:32:90.14:0,90,1342	0/0:23,0:23:68.23:0,68,953	0/0:25,0:25:69.04:0,69,1036	0/0:30,0:30:71.36:0,71,1159	0/0:17,0:17:51.09:0,51,781	0/1:20,0:20:62.94:140,0,63	0/1:6,12:18:26.11:177,0,26	0/1:17,0:17:49.41:49,0,92	0/1:20,0:20:76.57:98,0,77	0/1:43,0:43:88.15:200,0,88	0/0:16,0:16:32.44:0,32,625	0/1:10,0:10:9.35:9,0,99	0/1:19,0:19:77.48:91,0,77	0/0:20,0:20:37.03:0,37,642	0/1:24,0:24:95.22:95,0,192	0/1:31,0:31:99:102,0,199	0/1:11,0:11:43.09:43,0,46
chr10	70142826	.	T	TAC	617.16	PASS	AB=0.940;AC=16;AF=0.308;AN=52;BaseQRankSum=-1.076;DP=623;FS=1.006;HRun=0;HaplotypeScore=98.6674;InbreedingCoeff=0.1582;MQ=67.72;MQ0=14;MQRankSum=0.133;QD=2.39;ReadPosRankSum=-0.517;VQSLOD=2.1235;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,1:35:23.36:23,0,166	1/1:4,1:7:3:26,3,0	./.	./.	0/0:15,0:18:5.85:0,6,46	0/0:19,0:19:15.51:0,16,162	0/0:24,0:26:0.15:0,0,38	0/1:32,0:32:0:1,0,0	0/0:19,0:19:17.78:0,18,144	0/0:20,0:19:12.02:0,12,122	0/0:12,0:11:2.04:0,2,21	0/0:19,0:27:14.20:0,14,70	0/0:14,0:14:3.01:0,3,32	0/1:23,1:23:32.39:32,0,85	0/0:22,0:23:8.86:0,9,79	0/0:25,0:28:32.54:0,33,271	0/0:22,0:23:26.87:0,27,246	0/0:12,0:15:8.27:0,8,42	0/1:9,2:11:16.05:78,0,16	0/1:11,4:16:26.39:77,0,26	1/1:25,6:29:3.01:44,3,0	0/0:15,0:21:14.20:0,14,70	0/0:19,0:19:2.59:0,3,10	0/1:30,1:33:48.57:49,0,235	0/1:13,0:14:25.52:26,0,119	1/1:26,0:26:15.01:168,15,0	1/1:8,9:17:8.54:133,9,0	0/1:11,0:11:1.63:110,0,2
chr10	70145476	.	C	CA	456.96	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.665;DP=678;FS=1.938;HRun=8;HaplotypeScore=63.6498;InbreedingCoeff=0.8181;MQ=68.91;MQ0=2;MQRankSum=-0.378;QD=18.28;ReadPosRankSum=1.745;VQSLOD=3.6995;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:53.97:0,54,478	0/0:16,0:16:44.99:0,45,405	0/0:28,0:24:36.32:0,36,311	0/0:23,0:19:1.39:0,1,225	0/0:26,0:26:69.03:0,69,631	0/0:27,0:27:72:0,72,653	0/0:21,0:21:54:0,54,485	0/0:36,0:36:80.53:0,81,700	0/0:28,0:28:63.02:0,63,576	0/0:35,0:35:99:0,99,903	0/0:20,0:21:59.03:0,59,517	0/0:21,0:21:53.96:0,54,481	0/0:27,0:27:74.98:0,75,670	0/0:18,0:18:42.01:0,42,384	0/0:20,0:20:51.03:0,51,467	0/0:26,0:26:66.02:0,66,604	0/0:13,0:13:38.92:0,39,337	1/1:6,18:25:48.14:552,48,0	0/0:27,0:27:63.02:0,63,572	0/0:32,0:32:90.03:0,90,819	0/0:19,0:19:51:0,51,461	0/0:20,0:20:51.02:0,51,467	0/0:25,0:25:60.02:0,60,549	0/0:13,0:11:36.01:0,36,325	0/0:27,0:27:78.03:0,78,710	0/0:31,0:31:84:0,84,760	0/0:33,0:33:86.98:0,87,780	0/0:19,0:19:56.99:0,57,513
chr10	70147969	.	AGT	A	868.85	PASS	AB=0.915;AC=31;AF=0.620;AN=50;BaseQRankSum=5.327;DP=549;FS=0.892;HRun=0;HaplotypeScore=75.8739;InbreedingCoeff=-0.0171;MQ=66.45;MQ0=8;MQRankSum=0.199;QD=2.20;ReadPosRankSum=2.146;VQSLOD=1.6753;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,7:28:21.05:221,21,0	1/1:3,3:6:3.01:32,3,0	0/0:33,0:19:0.47:0,0,1	./.	1/1:21,4:25:3:32,3,0	0/0:24,3:26:15.05:0,15,217	0/1:20,1:21:11.21:11,0,191	./.	1/1:7,2:9:8.73:78,9,0	0/1:16,3:19:46.45:46,0,125	0/0:15,0:14:9.02:0,9,110	0/1:11,2:13:26.21:26,0,38	0/1:20,1:21:19.75:20,0,101	0/0:22,0:21:18.03:0,18,227	1/1:17,4:21:11.86:111,12,0	0/1:12,4:16:17.25:17,0,85	0/1:16,6:22:5.37:142,0,5	1/1:6,0:11:2.84:14,3,0	0/1:14,0:13:0:0,0,0	1/1:16,0:17:2.84:14,3,0	0/1:26,0:23:8.76:9,0,14	0/1:20,1:20:17.19:17,0,159	0/1:15,1:16:26.21:26,0,38	1/1:23,3:27:11.86:111,12,0	0/1:16,1:17:12.49:12,0,242	1/1:16,0:20:2.60:10,3,0	1/1:18,0:23:13.63:66,14,0	./.
chr10	70148702	.	T	TACACAC	602.74	PASS	AB=0.944;AC=7;AF=0.125;AN=56;BaseQRankSum=9.087;DP=565;FS=14.511;HRun=0;HaplotypeScore=138.9060;InbreedingCoeff=0.0725;MQ=67.51;MQ0=12;MQRankSum=-1.688;QD=4.98;ReadPosRankSum=-0.903;VQSLOD=1.8571;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:32.92:0,33,700	0/0:9,0:9:27.08:0,27,466	0/0:27,0:17:44.24:0,44,772	0/0:24,0:17:51.01:0,51,874	0/0:14,0:14:26.82:0,27,389	0/0:15,0:15:38.56:0,39,714	0/0:26,0:26:60.05:0,60,1055	0/0:24,0:22:51.74:0,52,833	0/0:20,0:20:38.85:0,39,996	0/0:15,0:15:42.06:0,42,587	0/0:12,0:12:27.06:0,27,408	0/0:21,0:21:46.16:0,46,984	0/0:24,0:24:62.78:0,63,1097	0/0:22,0:22:66.16:0,66,1111	0/0:20,0:20:49.77:0,50,702	0/0:26,0:26:55.03:0,55,801	0/0:29,0:29:32.54:0,33,589	0/0:21,0:21:49.44:0,49,890	0/0:7,0:7:2.28:0,2,253	0/1:11,3:18:62.27:62,0,410	0/1:28,0:28:99:145,0,546	0/0:13,0:13:36.01:0,36,533	0/0:16,0:16:39.07:0,39,524	0/1:32,0:31:99:168,0,355	0/0:24,0:24:46.61:0,47,1132	0/1:30,0:29:99:107,0,845	0/1:12,0:12:99:201,0,189	1/1:1,0:1:3.01:46,3,0
chr10	70148703	.	G	GACACACA	1246.27	PASS	AB=0.808;AC=10;AF=0.179;AN=56;BaseQRankSum=8.588;DP=608;FS=9.521;HRun=0;HaplotypeScore=159.8501;InbreedingCoeff=-0.1550;MQ=65.73;MQ0=13;MQRankSum=-1.800;QD=5.01;ReadPosRankSum=-1.858;VQSLOD=1.8090;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:42:2.07:2,0,577	0/0:9,0:9:27:0,27,429	0/0:28,0:17:51.16:0,51,670	0/0:26,0:16:48.15:0,48,642	0/0:8,0:15:12.02:0,12,334	0/0:14,0:15:42.07:0,42,700	0/0:24,0:27:65.52:0,66,1085	0/1:26,0:24:13.44:13,0,597	0/0:19,0:20:14.98:0,15,1041	0/0:14,0:16:19.15:0,19,468	0/0:9,0:12:27.08:0,27,393	0/0:17,0:20:50.39:0,50,1082	0/0:16,0:24:63.16:0,63,1079	0/0:24,0:24:66.20:0,66,1112	0/0:16,0:21:49.55:0,50,621	0/0:15,0:27:56.65:0,57,682	0/1:12,0:33:32.69:33,0,428	0/0:21,0:21:52.15:0,52,1017	0/1:10,0:10:19.76:20,0,223	0/1:17,0:17:41.50:41,0,338	0/1:31,0:31:99:321,0,465	0/0:10,0:14:35.96:0,36,537	0/0:16,0:16:36.10:0,36,489	0/1:21,0:37:99:189,0,318	0/0:20,0:24:19.73:0,20,1026	0/1:20,3:33:99:349,0,599	0/1:8,0:14:99:346,0,210	0/1:2,1:4:4.85:72,0,5
chr10	70148827	.	C	CA	764.40	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.387;DP=752;FS=3.203;HRun=1;HaplotypeScore=75.6263;InbreedingCoeff=0.9994;MQ=81.64;MQ0=0;MQRankSum=-3.229;QD=40.23;ReadPosRankSum=1.124;VQSLOD=4.3470;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.24:0,87,1189	0/0:10,0:10:30.10:0,30,419	0/0:25,0:25:63.08:0,63,782	0/0:27,0:27:68.20:0,68,796	0/0:30,0:30:87.28:0,87,1196	0/0:23,0:23:69.21:0,69,945	0/0:20,0:20:57.17:0,57,763	0/0:27,0:27:81.25:0,81,1083	0/0:27,0:27:81.26:0,81,1116	0/0:38,0:38:99:0,111,1523	0/0:20,0:20:57.18:0,57,774	0/0:24,0:24:72.21:0,72,958	0/0:25,0:25:75.25:0,75,1048	0/0:32,0:32:96.26:0,96,1268	0/0:23,0:23:66.21:0,66,903	0/0:34,0:34:99:0,99,1334	0/0:30,0:30:87.26:0,87,1180	1/1:0,19:19:54.18:859,54,0	0/0:20,0:20:60.11:0,60,735	0/0:28,0:28:81.26:0,81,1114	0/0:26,0:26:75.14:0,75,971	0/0:35,0:35:99:0,105,1465	0/0:35,0:35:99:0,102,1417	0/0:34,0:34:99:0,99,1336	0/0:35,0:35:99:0,99,1379	0/0:39,0:39:99:0,114,1546	0/0:24,0:23:72.19:0,72,963	0/0:12,0:12:36.12:0,36,502
chr10	70149274	.	A	AT	983.13	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.910;DP=824;FS=16.703;HRun=1;HaplotypeScore=85.0897;InbreedingCoeff=1.0000;MQ=83.62;MQ0=0;MQRankSum=-4.332;QD=36.41;ReadPosRankSum=0.596;VQSLOD=2.0185;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.21:0,90,1133	0/0:18,0:18:54.16:0,54,686	0/0:30,0:30:88.95:0,89,1014	0/0:17,0:17:48.09:0,48,549	0/0:43,0:43:99:0,123,1535	0/0:19,0:19:57.14:0,57,695	0/0:22,0:22:66.18:0,66,828	0/0:31,0:31:87.25:0,87,1083	0/0:30,0:30:87.28:0,87,1129	0/0:25,0:25:75.23:0,75,952	0/0:33,0:33:93.29:0,93,1192	0/0:26,0:26:75.19:0,75,918	0/0:43,0:43:99:0,126,1605	0/0:41,0:41:99:0,120,1514	0/0:39,0:38:99:0,105,1350	0/0:29,0:29:84.27:0,84,1090	0/0:21,0:21:60.19:0,60,778	1/1:2,25:27:72.24:1078,72,0	0/0:35,0:35:99:0,102,1285	0/0:47,0:47:99:0,138,1663	0/0:22,0:22:66.21:0,66,856	0/0:26,0:26:72.19:0,72,893	0/0:28,0:28:84.15:0,84,1024	0/0:23,0:23:69.17:0,69,875	0/0:30,0:30:90.28:0,90,1154	0/0:37,0:37:99:0,111,1416	0/0:35,0:35:99:0,102,1320	0/0:15,0:15:45.15:0,45,584
chr10	70150541	.	CA	C	491.94	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.178;DP=417;FS=0.000;HRun=1;HaplotypeScore=42.6193;InbreedingCoeff=0.9759;MQ=89.94;MQ0=0;MQRankSum=-2.393;QD=35.14;ReadPosRankSum=1.960;VQSLOD=3.2309;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.19:0,66,1055	0/0:7,0:7:21.07:0,21,334	0/0:20,0:20:57.19:0,57,884	0/0:12,0:12:33.07:0,33,473	0/0:14,0:14:39.13:0,39,624	0/0:12,0:12:36.12:0,36,575	0/0:17,0:17:51.17:0,51,816	0/0:25,0:25:72.17:0,72,1057	0/0:14,0:14:42.14:0,42,672	0/0:21,0:21:63.21:0,63,1007	0/0:13,0:13:39.12:0,39,601	0/0:15,0:15:45.15:0,45,720	0/0:20,0:20:60.20:0,60,959	0/0:13,0:13:39.12:0,39,601	0/0:16,0:16:48.16:0,48,768	0/0:20,0:20:60.20:0,60,958	0/0:18,0:18:54.18:0,54,859	1/1:0,14:14:42.14:587,42,0	0/0:15,0:14:45.15:0,45,720	0/0:11,0:11:27.06:0,27,384	0/0:23,0:23:69.22:0,69,1079	0/0:13,0:13:33.08:0,33,527	0/0:8,0:8:24.08:0,24,384	0/0:11,0:11:33.11:0,33,528	0/0:14,0:14:36.07:0,36,551	0/0:10,0:10:30.10:0,30,480	0/0:13,0:13:39.13:0,39,623	0/0:5,0:5:15.05:0,15,240
chr10	70150658	.	TAC	T	33.24	PASS	AB=0.954;AC=9;AF=0.173;AN=52;BaseQRankSum=3.101;DP=186;FS=5.656;HRun=0;HaplotypeScore=39.5595;InbreedingCoeff=-0.0132;MQ=60.36;MQ0=4;MQRankSum=-1.197;QD=0.55;ReadPosRankSum=2.238;VQSLOD=0.6730;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:6:5.49:0,5,47	./.	0/0:4,0:2:0:0,0,0	0/0:16,0:2:0.47:0,0,1	0/0:4,0:4:8.95:0,9,67	0/1:14,0:14:3.51:4,0,425	0/0:1,0:1:3.01:0,3,34	0/0:41,0:40:56.34:0,56,538	0/0:6,0:6:18.02:0,18,243	0/1:6,0:6:9.12:9,0,126	0/0:2,0:2:6.01:0,6,83	0/1:6,0:6:0.31:0,0,182	0/0:6,0:6:6.67:0,7,164	0/1:3,0:3:15.01:15,0,106	0/0:6,0:6:18.01:0,18,232	0/0:7,0:7:18.02:0,18,248	0/1:9,8:17:61.49:61,0,93	0/0:5,0:5:3.38:0,3,46	0/1:4,0:4:10.12:10,0,66	0/0:3,0:3:8.99:0,9,87	0/0:1,0:1:3.01:0,3,41	0/0:2,0:2:3.01:0,3,52	1/1:1,1:2:3.01:41,3,0	./.	0/0:9,0:9:24.01:0,24,311	0/0:4,0:4:11.89:0,12,118	0/0:2,0:2:2.99:0,3,24	0/1:8,0:8:3.92:4,0,89
chr10	70150660	.	CAT	C	328.51	PASS	AB=0.918;AC=12;AF=0.231;AN=52;BaseQRankSum=3.512;DP=187;FS=1.831;HRun=0;HaplotypeScore=37.9488;InbreedingCoeff=-0.1254;MQ=59.63;MQ0=5;MQRankSum=1.583;QD=3.25;ReadPosRankSum=-1.716;VQSLOD=0.8696;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:6:0:0,0,0	./.	0/0:5,0:2:0:0,0,0	0/0:19,0:2:0.47:0,0,1	0/0:4,0:4:3.01:0,3,46	0/0:12,0:14:11.11:0,11,324	0/0:0,0:1:3:0,3,26	0/1:39,0:38:64.32:231,0,64	0/0:6,0:6:12.02:0,12,165	0/1:3,2:5:59.44:59,0,84	0/0:2,0:2:3.01:0,3,48	0/1:5,1:6:22.79:23,0,132	0/1:5,1:6:27.70:28,0,127	0/1:2,1:3:26.71:27,0,86	0/0:6,0:6:12.04:0,12,188	0/0:7,0:7:9.03:0,9,143	0/1:16,0:17:17.30:24,0,17	0/1:5,0:5:12.24:18,0,12	0/0:5,0:5:5.02:0,5,23	0/0:4,0:4:11.71:0,12,68	0/0:1,0:1:2.92:0,3,17	0/0:1,0:1:3.01:0,3,48	1/1:1,0:1:2.90:16,3,0	./.	0/0:8,0:8:12.04:0,12,189	0/1:4,0:4:0.02:0,0,27	0/0:2,0:2:2.92:0,3,17	0/1:8,0:8:25.93:26,0,33
chr10	70150681	.	ATC	A	1734.05	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=3.903;DP=240;FS=2.097;HRun=0;HaplotypeScore=37.2869;InbreedingCoeff=0.6952;MQ=81.45;MQ0=3;MQRankSum=0.685;QD=16.67;ReadPosRankSum=-0.673;VQSLOD=3.2197;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:3:2.99:23,3,0	1/1:1,0:1:3:25,3,0	0/0:8,0:5:8.75:0,9,70	0/0:28,0:11:22.41:0,22,193	0/0:1,0:1:2.98:0,3,22	0/0:12,0:12:32.66:0,33,462	0/0:6,0:6:17.99:0,18,162	1/1:4,32:36:65.25:1030,65,0	0/0:8,0:8:20.97:0,21,228	0/0:10,0:10:11.52:0,12,264	0/0:5,0:5:12:0,12,130	0/0:9,0:9:12.97:0,13,253	0/0:12,0:12:21.92:0,22,329	0/0:10,0:10:18.92:0,19,273	0/0:10,0:10:30.02:0,30,369	0/0:6,0:6:15.02:0,15,214	1/1:14,0:14:2.72:98,3,0	1/1:1,6:7:6:67,6,0	1/1:6,0:6:9.96:94,10,0	0/1:6,0:6:4.33:39,0,4	1/1:3,0:3:2.80:44,3,0	0/0:6,0:6:17.92:0,18,172	1/1:5,0:5:15:141,15,0	1/1:3,0:3:8.98:72,9,0	0/0:5,0:5:15.03:0,15,215	1/1:7,0:7:10.31:98,10,0	1/1:3,0:3:2.90:44,3,0	1/1:7,2:9:0.89:151,1,0
chr10	70151209	.	T	TG	361.26	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.727;DP=642;FS=0.000;HRun=8;HaplotypeScore=65.2121;InbreedingCoeff=0.9926;MQ=81.33;MQ0=0;MQRankSum=-2.629;QD=20.07;ReadPosRankSum=-1.438;VQSLOD=3.0698;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:51.01:0,51,467	0/0:11,0:11:30:0,30,270	0/0:23,0:23:43.82:0,44,378	0/0:11,0:11:18.99:0,19,133	0/0:32,0:31:75.01:0,75,681	0/0:25,0:25:60.02:0,60,549	0/0:17,0:17:48.03:0,48,439	0/0:33,0:32:63:0,63,577	0/0:13,0:13:36.02:0,36,329	0/0:31,0:30:72.02:0,72,659	0/0:29,0:29:69.03:0,69,631	0/0:20,0:20:45.01:0,45,412	0/0:25,0:25:63.01:0,63,572	0/0:29,0:29:78.03:0,78,714	0/0:27,0:27:75.02:0,75,681	0/0:26,0:26:72.02:0,72,654	0/0:23,0:23:51.02:0,51,467	1/1:4,14:18:42.05:456,42,0	0/0:23,0:23:51:0,51,462	0/0:34,0:34:87.01:0,87,791	0/0:21,0:21:45.01:0,45,412	0/0:17,0:17:45.02:0,45,412	0/0:17,0:17:36:0,36,329	0/0:19,0:19:57.03:0,57,521	0/0:22,0:22:54.01:0,54,494	0/0:15,0:15:42.02:0,42,384	0/0:43,0:43:99:0,111,1016	0/0:14,0:14:42.02:0,42,384
chr10	70153149	.	G	GA	3633.66	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-11.018;DP=679;FS=16.819;HRun=9;HaplotypeScore=70.9661;InbreedingCoeff=0.9954;MQ=76.82;MQ0=0;MQRankSum=-0.974;QD=25.06;ReadPosRankSum=-1.233;VQSLOD=2.2887;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:89.92:0,90,781	1/1:1,11:12:33.09:365,33,0	0/0:17,0:17:32.92:0,33,273	0/0:16,0:16:14.90:0,15,181	0/0:40,0:41:99:0,110,940	0/0:17,0:17:47.99:0,48,417	0/0:24,0:24:68.98:0,69,599	0/0:31,0:31:71.97:0,72,623	0/0:29,0:29:80.97:0,81,700	0/0:24,0:24:65.98:0,66,573	0/0:25,0:25:62.97:0,63,547	0/0:26,0:26:68.97:0,69,599	0/0:34,0:34:83.01:0,83,709	0/0:25,0:25:62.95:0,63,543	0/0:21,0:21:53.98:0,54,469	0/0:26,0:26:71.95:0,72,618	0/0:31,0:32:89.01:0,89,761	0/0:2,0:12:20.37:0,20,60	1/1:3,12:15:33.09:365,33,0	1/1:3,25:28:69.15:751,69,0	1/1:1,10:11:24.06:265,24,0	0/0:24,0:24:41.50:0,41,522	0/0:24,0:25:65.01:0,65,553	0/0:20,0:20:53.99:0,54,469	0/0:29,0:29:68.95:0,69,594	1/1:6,25:32:31.94:792,32,0	1/1:7,29:35:72.10:797,72,0	1/1:1,10:11:27.07:299,27,0
chr10	70154855	.	CT	C	2803.88	PASS	AB=0.818;AC=28;AF=0.500;AN=56;BaseQRankSum=6.838;DP=550;FS=117.494;HRun=2;HaplotypeScore=49.5624;InbreedingCoeff=0.7658;MQ=54.62;MQ0=81;MQRankSum=-0.642;QD=11.00;ReadPosRankSum=-3.146;VQSLOD=-0.0367;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,13:12:14.98:190,15,0	1/1:0,5:4:6.02:76,6,0	0/0:47,0:13:30.09:0,30,383	0/0:62,0:19:31.06:0,31,417	1/1:4,19:13:23.77:304,24,0	0/0:14,0:11:5.29:0,5,316	0/0:22,0:18:46.23:0,46,517	1/1:10,17:23:42.98:516,43,0	0/0:16,0:15:39.01:0,39,466	0/0:16,0:15:45.15:0,45,602	0/0:24,0:22:48.16:0,48,641	0/0:20,0:20:51.12:0,51,648	0/0:15,0:14:30.57:0,31,400	0/0:14,0:12:26.79:0,27,324	0/0:17,0:16:39.11:0,39,505	0/0:15,0:14:35.44:0,35,429	1/1:6,11:11:12.16:220,12,0	1/1:2,7:5:6.01:65,6,0	1/1:7,9:12:27.09:342,27,0	1/1:11,13:13:17.80:228,18,0	0/1:9,12:7:4.18:102,0,4	0/1:17,0:16:4.06:4,0,412	1/1:7,7:6:5.56:76,6,0	1/1:6,10:7:9.03:114,9,0	0/0:13,0:13:11.49:0,11,366	1/1:8,17:17:0.21:396,0,0	1/1:4,13:11:24.08:304,24,0	1/1:0,5:3:6.02:76,6,0
chr10	70156111	.	TCTCTCCCTCTCC	T	7736.37	PASS	AB=0.667;AC=25;AF=0.446;AN=56;BaseQRankSum=4.693;DP=552;FS=2.194;HRun=0;HaplotypeScore=177.0108;InbreedingCoeff=0.8602;MQ=77.62;MQ0=9;MQRankSum=-7.909;QD=29.42;ReadPosRankSum=0.900;VQSLOD=4.5457;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,20:25:33.11:1061,33,0	1/1:1,7:8:15.05:424,15,0	0/0:27,0:20:2.56:0,3,22	0/0:29,0:21:12.09:0,12,117	1/1:9,14:23:15.01:315,15,0	0/0:21,0:20:46.02:0,46,1611	0/0:23,0:23:51.64:0,52,2037	1/1:18,0:16:18.06:310,18,0	0/0:12,0:12:30.10:0,30,1325	0/0:26,0:26:46.93:0,47,1156	0/0:22,0:22:31.92:0,32,1131	0/0:18,0:18:42.14:0,42,1763	0/0:18,0:18:39.13:0,39,1831	0/0:14,0:14:33.11:0,33,1143	0/0:15,0:14:21.07:0,21,797	0/0:16,0:16:39.13:0,39,2047	1/1:9,17:24:12.04:423,12,0	0/0:11,0:12:21.07:0,21,269	1/1:18,3:19:30.04:657,30,0	1/1:6,12:18:21.03:591,21,0	1/1:11,11:21:3.01:62,3,0	0/0:18,0:18:35.95:0,36,1010	1/1:9,11:20:15.05:529,15,0	0/1:11,11:22:12.63:268,0,13	0/0:18,0:18:18.04:0,18,595	1/1:18,11:29:54.18:1694,54,0	1/1:13,6:17:42.14:1192,42,0	1/1:12,0:12:15.05:210,15,0
chr10	70156127	.	T	TC	1632.54	PASS	AB=0.905;AC=15;AF=0.268;AN=56;BaseQRankSum=3.721;DP=563;FS=12.175;HRun=3;HaplotypeScore=97.4004;InbreedingCoeff=0.1739;MQ=56.22;MQ0=34;MQRankSum=-3.752;QD=6.80;ReadPosRankSum=1.875;VQSLOD=-0.2201;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:24:26.72:172,0,27	0/1:8,0:7:0.73:74,0,1	0/1:31,0:12:0.67:1,0,27	0/0:29,0:12:14.91:0,15,139	0/1:17,0:17:13.68:95,0,14	0/0:26,0:24:60.17:0,60,708	0/0:25,0:22:60:0,60,719	0/1:13,4:13:99:216,0,100	0/0:10,0:10:30.09:0,30,360	0/0:25,0:25:64.72:0,65,726	0/0:21,0:19:40:0,40,469	0/0:17,0:17:48.15:0,48,575	0/0:18,0:18:48.15:0,48,576	0/0:18,0:18:51.14:0,51,600	0/0:15,0:12:30.09:0,30,360	0/0:23,0:23:69.19:0,69,804	0/0:25,0:23:11.16:0,11,58	0/0:17,0:17:35.54:0,36,354	0/1:27,5:22:99:198,0,282	1/1:13,0:12:2.57:59,3,0	0/0:19,0:16:9.03:0,9,106	0/0:18,0:17:39.67:0,40,470	1/1:18,1:17:4.59:12,5,0	0/1:20,1:20:30.13:184,0,30	0/0:15,0:15:21.04:0,21,231	0/1:18,8:25:99:279,0,143	0/1:14,7:18:99:291,0,139	1/1:3,5:8:15.05:210,15,0
chr10	70156140	.	C	CT	509.85	PASS	AB=0.963;AC=11;AF=0.196;AN=56;BaseQRankSum=7.721;DP=570;FS=2.129;HRun=1;HaplotypeScore=101.2393;InbreedingCoeff=-0.0258;MQ=56.14;MQ0=35;MQRankSum=-6.433;QD=2.23;ReadPosRankSum=0.915;VQSLOD=-0.6657;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:27:99:198,0,183	0/1:11,0:10:15.10:15,0,55	0/1:39,0:15:6.36:6,0,287	0/0:38,0:15:29.88:0,30,344	0/0:21,0:21:9.93:0,10,219	0/0:23,0:21:61.02:0,61,782	0/0:22,0:19:53.97:0,54,716	0/1:14,1:11:18.44:18,0,307	0/0:12,0:12:36.12:0,36,503	0/0:20,0:20:51.16:0,51,679	0/0:20,0:18:40.01:0,40,526	0/0:16,0:16:48.15:0,48,652	0/0:17,0:17:48.15:0,48,654	0/0:18,0:18:51.15:0,51,680	0/0:16,0:13:36.10:0,36,466	0/0:27,0:27:81.27:0,81,1123	0/0:27,0:25:32.49:0,32,291	0/0:17,0:16:35.94:0,36,479	0/1:27,1:18:13.56:14,0,527	0/1:16,0:15:1.98:2,0,125	0/0:23,0:20:19.30:0,19,241	0/0:13,0:12:29.35:0,29,398	1/1:16,0:14:10.03:32,10,0	0/1:25,0:23:47.84:48,0,188	0/0:9,0:9:24.08:0,24,332	0/1:25,5:29:99:184,0,484	0/1:17,2:16:99:137,0,218	0/0:1,0:1:3.01:0,3,42
chr10	70156171	.	T	TTC	785.33	PASS	AB=0.989;AC=3;AF=0.054;AN=56;BaseQRankSum=-0.886;DP=704;FS=4.201;HRun=0;HaplotypeScore=133.2594;InbreedingCoeff=0.5421;MQ=62.09;MQ0=11;MQRankSum=-4.187;QD=7.14;ReadPosRankSum=1.113;VQSLOD=3.4484;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:85.81:0,86,1018	0/0:11,0:11:30.01:0,30,331	0/0:65,0:23:0.15:0,0,145	0/1:87,0:38:19.70:20,0,263	0/0:23,0:23:42.08:0,42,485	0/0:19,0:19:48.15:0,48,586	0/0:23,0:23:45.34:0,45,512	0/0:26,0:27:57.01:0,57,674	0/0:13,0:13:33.08:0,33,377	0/0:20,0:20:45.12:0,45,529	0/0:20,0:20:48.15:0,48,585	0/0:14,0:14:39.12:0,39,475	0/0:19,0:19:42.13:0,42,506	0/0:18,0:18:48.09:0,48,553	0/0:23,0:22:26.92:0,27,596	0/0:29,0:28:66.19:0,66,792	0/0:26,0:26:60.58:0,61,701	1/1:2,19:21:56.22:871,56,0	0/0:18,0:18:32.93:0,33,374	0/0:21,0:21:48.11:0,48,566	0/0:26,0:25:44.99:0,45,534	0/0:15,0:16:44.64:0,45,501	0/0:14,0:14:18.05:0,18,220	0/0:32,0:33:54.16:0,54,660	0/0:13,0:13:33.10:0,33,403	0/0:31,0:31:71.87:0,72,813	0/0:15,0:16:26.91:0,27,302	0/0:11,0:10:30.08:0,30,353
chr10	70156254	.	TTCTG	T	4980.78	PASS	AB=0.792;AC=16;AF=0.286;AN=56;BaseQRankSum=12.437;DP=753;FS=0.393;HRun=0;HaplotypeScore=126.1568;InbreedingCoeff=0.7927;MQ=62.74;MQ0=7;MQRankSum=-1.184;QD=20.67;ReadPosRankSum=1.196;VQSLOD=4.2812;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:87.25:0,87,1788	0/1:9,1:10:21.36:21,0,504	0/0:38,0:29:21.46:0,21,375	0/0:24,0:22:21.03:0,21,400	0/0:34,0:34:69.22:0,69,1597	0/0:28,0:28:63.22:0,63,1393	0/0:24,1:25:0.17:0,0,921	1/1:18,14:32:42.10:604,42,0	0/0:8,0:8:18.04:0,18,375	0/0:37,2:38:21.30:0,21,1525	0/0:27,1:28:41.22:0,41,1120	0/0:14,0:14:33.11:0,33,770	0/0:17,0:17:39.13:0,39,940	0/0:17,0:17:36.11:0,36,793	0/0:16,0:16:33.11:0,33,708	0/0:24,0:24:69.21:0,69,1496	0/0:29,0:29:51.17:0,51,1142	0/1:15,14:29:3.39:723,0,3	1/1:13,12:25:18.15:508,18,0	1/1:11,13:24:35.97:469,36,0	1/1:16,27:43:51.17:824,51,0	0/0:30,0:30:66.23:0,66,1527	0/0:27,0:27:57.16:0,57,1262	0/0:38,0:38:81.19:0,81,1718	0/0:26,0:26:51.16:0,51,1103	1/1:11,23:33:69.18:1047,69,0	1/1:6,25:31:44.53:688,45,0	1/1:9,4:11:6.02:97,6,0
chr10	70158607	.	GC	G	1571.23	PASS	AB=0.714;AC=11;AF=0.204;AN=54;BaseQRankSum=5.510;DP=296;FS=8.697;HRun=9;HaplotypeScore=31.3854;InbreedingCoeff=0.7674;MQ=88.54;MQ0=0;MQRankSum=-0.072;QD=20.14;ReadPosRankSum=3.289;VQSLOD=3.1665;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,1:16:11.64:0,12,379	0/0:3,0:3:9.01:0,9,94	0/0:11,0:11:27.03:0,27,280	0/0:11,0:11:6.34:0,6,122	0/0:17,0:17:48.10:0,48,524	0/0:5,0:5:12.04:0,12,138	0/0:17,0:17:39.09:0,39,431	0/0:10,0:10:21.05:0,21,233	0/0:7,0:7:15:0,15,158	0/0:13,0:14:38.95:0,39,430	0/0:8,0:8:18.05:0,18,208	0/0:11,0:11:30.07:0,30,329	0/0:11,0:11:30.06:0,30,327	0/0:16,0:16:45.12:0,45,511	0/0:12,0:12:36.06:0,36,379	0/0:8,0:8:21.05:0,21,234	0/0:15,0:15:39.10:0,39,439	0/1:3,2:5:42.90:43,0,57	1/1:0,8:8:24.01:220,24,0	1/1:0,7:7:21.01:192,21,0	1/1:1,28:29:75.04:686,75,0	0/0:7,0:7:15.04:0,15,173	0/0:5,0:5:12.02:0,12,129	0/0:6,0:6:15.04:0,15,165	0/0:7,0:7:18.05:0,18,208	1/1:3,12:15:1.29:267,1,0	1/1:1,13:14:36.01:329,36,0	./.
chr10	70160686	.	C	CT	135.66	PASS	AB=0.719;AC=1;AF=0.018;AN=56;BaseQRankSum=4.346;DP=807;FS=11.739;HRun=4;HaplotypeScore=88.6865;InbreedingCoeff=-0.0183;MQ=59.78;MQ0=8;MQRankSum=-4.885;QD=5.90;ReadPosRankSum=0.813;VQSLOD=-0.2968;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:80.18:0,80,996	0/0:11,0:11:33.10:0,33,396	0/0:22,0:10:26.96:0,27,289	0/0:29,0:13:25.72:0,26,329	0/0:35,0:35:96.29:0,96,1151	0/0:32,0:32:93.29:0,93,1115	0/0:24,0:24:63.14:0,63,753	0/0:33,1:32:60:0,60,957	0/0:28,0:28:78.22:0,78,924	0/0:32,0:32:93.27:0,93,1096	0/0:32,0:32:90.27:0,90,1079	0/0:33,0:33:96.28:0,96,1138	0/0:34,0:34:99:0,99,1185	0/0:32,0:32:93.29:0,93,1114	0/0:32,0:32:96.29:0,96,1151	0/0:30,0:30:90.28:0,90,1079	0/0:28,0:28:75.21:0,75,883	0/1:14,9:22:99:210,0,201	0/0:25,0:24:66.09:0,66,760	0/0:34,0:34:96.28:0,96,1140	0/0:23,0:23:66.20:0,66,791	0/0:35,0:35:99:0,99,1176	0/0:31,0:31:90.28:0,90,1078	0/0:23,0:23:28.26:0,28,607	0/0:27,0:27:78.24:0,78,936	0/0:36,0:36:99:0,105,1248	0/0:28,0:28:78.24:0,78,934	0/0:21,0:20:60.18:0,60,720
chr10	70160698	.	C	CT	3729.31	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-7.189;DP=780;FS=2.111;HRun=9;HaplotypeScore=76.6823;InbreedingCoeff=0.9976;MQ=64.07;MQ0=7;MQRankSum=-0.888;QD=21.81;ReadPosRankSum=0.897;VQSLOD=4.4792;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,25:32:66.90:713,67,0	0/0:10,0:10:26.99:0,27,234	0/0:22,0:12:26.35:0,26,214	0/0:23,0:13:19.98:0,20,193	1/1:4,30:34:84.15:902,84,0	0/0:31,0:31:83.97:0,84,729	0/0:23,0:23:50.97:0,51,439	0/0:26,0:24:41.92:0,42,360	0/0:30,0:30:71.96:0,72,625	0/0:28,0:28:56.97:0,57,495	0/0:32,0:32:80.94:0,81,696	0/0:29,0:29:77.98:0,78,677	0/0:33,0:33:77.94:0,78,677	0/0:31,0:31:80.96:0,81,703	0/0:35,0:35:95.96:0,96,829	0/0:31,0:32:82.99:0,83,709	1/1:1,23:24:63.13:683,63,0	1/1:7,0:21:36.93:185,37,0	0/0:22,0:22:50.71:0,51,442	0/0:33,0:34:83.01:0,83,709	0/0:18,2:20:20.81:0,21,410	0/0:30,0:30:86.98:0,87,755	1/1:6,25:33:54.83:798,55,0	1/1:4,19:23:42.03:449,42,0	0/0:28,0:28:68.05:0,68,589	0/0:35,0:35:88.79:0,89,760	0/0:30,0:30:68.91:0,69,594	0/0:25,0:25:41.95:0,42,365
chr10	70162328	.	A	AGG	6626.93	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=16.869;DP=713;FS=0.000;HRun=0;HaplotypeScore=97.1669;InbreedingCoeff=0.9844;MQ=55.28;MQ0=7;MQRankSum=-0.010;QD=46.67;ReadPosRankSum=3.407;VQSLOD=5.9820;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,43:45:99:1942,105,0	0/0:6,0:6:18.06:0,18,293	0/0:11,0:3:9.03:0,9,147	0/0:23,0:11:29.74:0,30,421	1/1:0,13:14:36.12:678,36,0	0/0:21,0:21:60.18:0,60,953	0/0:41,0:41:99:0,123,1976	0/0:41,0:40:99:0,120,1881	0/0:24,0:24:72.25:0,72,1173	0/0:23,0:22:63.22:0,63,1028	0/0:10,0:10:30.10:0,30,483	0/0:32,0:32:96.31:0,96,1536	0/0:29,0:29:87.30:0,87,1413	0/0:28,0:28:84.29:0,84,1368	0/0:34,0:34:99:0,102,1640	0/0:31,0:31:93.32:0,93,1516	1/1:0,38:41:99:1932,105,0	0/0:30,1:31:37.62:0,38,1356	0/0:19,0:16:48.16:0,48,773	0/0:21,0:21:60.20:0,60,978	0/0:36,0:36:99:0,105,1712	0/0:19,0:19:57.18:0,57,903	1/1:0,14:14:33.10:613,33,0	1/1:0,28:28:78.18:1461,78,0	0/0:24,0:24:69.22:0,69,1097	0/0:29,0:29:78.26:0,78,1251	0/0:24,0:24:72.23:0,72,1150	0/0:14,0:14:42.14:0,42,681
chr10	70163412	.	CGT	C	169.28	PASS	AB=0.938;AC=12;AF=0.222;AN=54;BaseQRankSum=3.725;DP=714;FS=4.928;HRun=0;HaplotypeScore=98.3704;InbreedingCoeff=-0.0481;MQ=58.28;MQ0=12;MQRankSum=0.520;QD=0.63;ReadPosRankSum=-0.016;VQSLOD=1.6679;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:33:1.56:5,2,0	0/0:5,0:12:11.03:0,11,82	0/0:25,0:13:0:0,0,0	./.	0/0:23,0:21:2.98:0,3,23	0/0:15,0:15:20.74:0,21,269	0/0:22,0:22:33.05:0,33,464	0/0:27,0:27:27.35:0,27,217	0/0:26,0:26:39.13:0,39,573	0/0:27,0:27:2.09:0,2,314	0/0:17,0:17:26.92:0,27,357	0/0:26,2:28:14.42:0,14,573	0/1:25,1:27:40.63:41,0,471	0/1:28,1:29:27.93:28,0,351	0/1:24,2:27:11.03:11,0,616	0/1:23,0:23:21.33:21,0,372	0/0:29,0:27:8.68:0,9,66	0/0:13,0:12:3.82:0,4,17	0/1:16,1:16:6.90:7,0,267	0/1:26,3:29:99:113,0,481	0/0:52,1:52:47.41:0,47,971	0/0:31,1:32:14.60:0,15,598	0/0:19,0:17:6.34:0,6,41	1/1:16,0:28:2.49:9,2,0	0/0:24,4:28:5.34:0,5,417	0/1:20,3:24:8.57:9,0,364	0/1:27,1:29:56.70:57,0,330	0/0:17,0:17:4.57:0,5,214
chr10	70164523	.	AG	A	1079.36	PASS	AB=0.852;AC=15;AF=0.268;AN=56;BaseQRankSum=-4.608;DP=543;FS=2.369;HRun=12;HaplotypeScore=97.8232;InbreedingCoeff=0.6059;MQ=71.93;MQ0=0;MQRankSum=1.347;QD=7.20;ReadPosRankSum=-0.619;VQSLOD=2.6216;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:87.73:0,88,517	0/0:9,0:9:3.01:0,3,31	0/0:25,1:22:3.16:0,3,137	0/1:20,0:19:35.50:55,0,36	0/0:16,0:16:32.09:0,32,189	0/1:11,1:12:5.26:5,0,117	0/0:20,1:28:5.61:0,6,201	1/1:9,0:16:14.23:41,14,0	0/0:16,0:24:14.72:0,15,110	0/0:11,0:14:5.90:0,6,37	0/0:11,0:12:3:0,3,25	0/0:16,0:23:18.33:0,18,161	0/0:18,0:18:17.88:0,18,142	0/0:9,0:15:5.83:0,6,38	0/0:17,0:22:23.55:0,24,195	0/0:11,0:13:20.60:0,21,149	0/0:33,0:33:78.39:0,78,431	0/0:26,0:26:49.51:0,50,222	1/1:7,9:18:30.94:219,31,0	0/1:5,6:12:3.77:113,0,4	1/1:7,16:23:32.83:255,33,0	0/0:10,0:14:4.09:0,4,18	0/0:16,0:16:43.89:0,44,274	0/0:21,0:21:46.46:0,46,255	0/0:18,0:25:9.01:0,9,91	1/1:7,8:17:29.99:202,30,0	1/1:2,19:24:41.95:296,42,0	1/1:3,4:8:10.76:75,11,0
chr10	70164527	.	G	GGT	783.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.058;DP=504;FS=5.231;HRun=0;HaplotypeScore=107.0101;InbreedingCoeff=0.8364;MQ=73.50;MQ0=0;MQRankSum=0.438;QD=27.99;ReadPosRankSum=3.593;VQSLOD=5.3336;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1560	0/0:6,0:6:11.98:0,12,118	0/0:25,0:21:36.31:0,36,424	0/0:19,0:19:34.86:0,35,360	0/0:17,0:17:48.01:0,48,613	0/0:9,0:9:20.07:0,20,219	0/0:27,0:27:44.84:0,45,491	0/0:18,0:18:35.94:0,36,298	0/0:19,0:19:16.15:0,16,228	0/0:13,0:13:23.86:0,24,195	0/0:6,0:6:10.25:0,10,82	0/0:16,0:16:25.01:0,25,268	0/0:12,0:12:19.22:0,19,191	0/0:11,0:11:11.80:0,12,91	0/0:15,0:15:32.45:0,32,344	0/0:12,0:12:11.30:0,11,180	0/0:33,0:33:96.24:0,96,1344	1/1:2,24:28:54.15:879,54,0	0/0:15,0:15:42:0,42,372	0/0:13,0:13:29.94:0,30,252	0/0:24,0:24:53.38:0,53,462	0/0:11,0:11:20.70:0,21,160	0/0:16,0:16:48.13:0,48,666	0/0:20,0:20:60.15:0,60,809	0/0:20,0:20:15.03:0,15,190	0/0:20,0:20:50.99:0,51,450	0/0:27,0:27:71.92:0,72,618	0/0:11,0:11:32.94:0,33,273
chr10	70165050	.	CAG	C	14962.89	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=17.541;DP=800;FS=14.678;HRun=0;HaplotypeScore=116.2404;InbreedingCoeff=0.9999;MQ=82.91;MQ0=0;MQRankSum=-2.321;QD=40.55;ReadPosRankSum=2.826;VQSLOD=5.8936;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:99:1699,111,0	1/1:1,10:11:30.10:459,30,0	0/0:23,0:23:62.94:0,63,1061	0/0:25,0:24:69.17:0,69,1195	1/1:0,21:21:57.15:846,57,0	0/0:22,0:22:66.21:0,66,1227	0/0:39,0:39:99:0,114,2188	1/1:0,25:25:75.18:1041,75,0	0/0:28,0:28:84.26:0,84,1555	0/0:25,0:25:75.25:0,75,1417	0/0:16,0:16:48.16:0,48,925	0/0:47,0:47:99:0,141,2689	0/0:34,0:34:99:0,102,1900	0/0:37,0:37:99:0,108,2018	0/0:37,0:37:99:0,111,2029	0/0:23,0:23:63.22:0,63,1212	1/1:0,42:42:99:1837,120,0	0/0:29,0:29:84.23:0,84,1536	1/1:1,15:16:45.11:643,45,0	1/1:2,28:30:78.17:1133,78,0	1/1:0,62:62:99:2433,160,0	0/0:21,0:21:63.20:0,63,1178	1/1:0,14:14:36.12:551,36,0	1/1:1,31:32:87.30:1331,87,0	0/0:25,0:25:75.24:0,75,1413	1/1:2,37:39:56.34:1568,56,0	1/1:0,23:23:54.18:825,54,0	1/1:0,15:15:39.13:597,39,0
chr10	70166646	.	T	TC	1899.11	PASS	AB=0.661;AC=22;AF=0.393;AN=56;BaseQRankSum=-1.897;DP=520;FS=0.000;HRun=5;HaplotypeScore=65.5135;InbreedingCoeff=0.7716;MQ=40.16;MQ0=49;MQRankSum=-2.699;QD=13.96;ReadPosRankSum=0.026;VQSLOD=2.4001;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,6:13:17.33:234,17,0	1/1:4,1:4:6.02:78,6,0	0/0:72,0:13:23.87:0,24,236	0/0:114,0:7:11.97:0,12,109	1/1:2,10:11:11.44:157,11,0	0/0:26,0:25:63.13:0,63,660	0/0:18,0:15:32.86:0,33,344	1/1:21,5:20:32.63:376,33,0	0/0:8,0:6:10.81:0,11,91	0/0:15,0:15:39.10:0,39,419	0/0:12,0:12:27.07:0,27,291	0/0:16,0:16:41.97:0,42,423	0/0:16,0:15:36.01:0,36,377	0/0:11,0:10:24.04:0,24,244	0/0:17,0:16:36.04:0,36,361	0/0:13,0:13:30.07:0,30,318	0/1:2,6:8:2.25:216,0,2	0/0:9,0:8:12.03:0,12,129	1/1:8,10:12:12.62:229,13,0	1/1:3,4:6:9.03:119,9,0	0/1:8,4:9:23.24:50,0,23	0/0:14,0:14:36.07:0,36,377	1/1:3,7:9:12.92:159,13,0	0/0:2,5:5:0:0,0,1	0/0:15,0:13:27.04:0,27,279	1/1:3,8:10:27.06:337,27,0	1/1:4,3:7:6.01:68,6,0	1/1:1,3:4:6.02:79,6,0
chr10	70166688	.	CTCTCTCTCT	C	33.06	PASS	AB=0.966;AC=6;AF=0.111;AN=54;BaseQRankSum=3.643;DP=439;FS=3.017;HRun=0;HaplotypeScore=95.9180;InbreedingCoeff=0.1508;MQ=50.10;MQ0=46;MQRankSum=-4.261;QD=0.64;ReadPosRankSum=-5.812;VQSLOD=0.5130;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:15,1:14:1.27:1,0,27	0/0:4,0:4:3.83:0,4,24	0/0:64,0:6:17.99:0,18,211	0/0:84,0:17:29.31:0,29,283	0/0:6,2:7:2.43:0,2,13	0/0:27,0:24:51.28:0,51,1702	0/0:24,0:22:42.79:0,43,1299	0/0:14,0:13:26.89:0,27,292	0/0:13,0:11:24.06:0,24,465	0/0:11,0:11:33.11:0,33,916	0/0:15,0:14:36.11:0,36,1120	0/0:16,0:14:25.54:0,26,1022	0/0:14,0:13:33.94:0,34,861	0/0:9,0:9:14.66:0,15,567	0/0:16,0:15:33.01:0,33,1121	0/0:10,0:10:30.01:0,30,863	0/1:12,0:12:99:106,0,127	0/0:5,0:4:6.49:0,6,156	0/0:10,0:7:17.19:0,17,137	0/1:5,0:5:0.01:0,0,0	1/1:7,0:2:0.47:1,0,0	0/0:12,0:12:30.09:0,30,887	0/1:11,1:12:3.98:4,0,97	0/0:7,0:6:4.11:0,4,18	0/0:9,0:8:15.04:0,15,372	0/0:7,0:7:16.80:0,17,90	0/0:2,0:2:2.92:0,3,17	./.
chr10	70166698	.	CCCCCCTA	C	70.64	PASS	AB=0.963;AC=7;AF=0.130;AN=54;BaseQRankSum=0.901;DP=432;FS=6.302;HRun=0;HaplotypeScore=93.7566;InbreedingCoeff=0.0848;MQ=55.49;MQ0=30;MQRankSum=-4.619;QD=0.41;ReadPosRankSum=-0.528;VQSLOD=1.0000;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,1:12:12.76:0,13,116	0/0:5,0:5:4.84:0,5,34	0/1:62,0:11:28.84:29,0,583	0/1:68,0:19:5.70:6,0,567	0/0:8,0:7:5.51:0,6,56	0/0:23,0:21:50.54:0,51,1353	0/0:30,0:28:53.53:0,54,1932	0/1:18,0:13:17.13:17,0,332	0/0:14,0:13:30.10:0,30,1013	0/0:12,0:12:36.12:0,36,1084	0/0:15,0:14:36.12:0,36,1241	0/0:18,0:17:46.67:0,47,1019	0/0:9,0:9:21.54:0,22,585	0/0:12,0:12:27.25:0,27,560	0/0:12,0:12:23.67:0,24,777	0/0:11,0:11:33.11:0,33,832	0/1:10,1:9:6.08:6,0,144	1/1:4,0:4:8.99:81,9,0	0/0:9,0:6:17.65:0,18,362	0/0:6,0:6:4.37:0,4,49	0/0:6,0:3:2.37:0,2,8	0/0:14,0:14:33.58:0,34,1081	0/0:13,0:12:3.01:0,3,32	0/0:10,1:10:11.35:0,11,122	0/0:9,0:9:21.07:0,21,623	0/1:8,1:9:52.72:53,0,421	0/0:3,0:2:3.01:0,3,56	./.
chr10	70166703	.	CTAT	C	115.33	PASS	AB=0.900;AC=19;AF=0.352;AN=54;BaseQRankSum=7.002;DP=434;FS=4.134;HRun=0;HaplotypeScore=78.3871;InbreedingCoeff=0.4521;MQ=56.73;MQ0=30;MQRankSum=-3.095;QD=1.23;ReadPosRankSum=-2.858;VQSLOD=1.0733;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:11,3:12:15.66:27,0,16	1/1:1,0:4:0.89:2,1,0	0/0:68,0:13:20.77:0,21,478	0/0:74,0:22:46.05:0,46,636	1/1:5,1:7:3.07:11,3,0	0/0:24,0:22:36.36:0,36,727	0/0:27,0:24:49.84:0,50,1115	0/0:15,0:11:25.52:0,26,239	0/0:13,0:13:29.31:0,29,598	0/0:13,0:13:28.87:0,29,713	0/0:15,0:14:13.27:0,13,682	0/0:16,0:16:8.39:0,8,380	0/0:11,0:11:15.09:0,15,325	0/1:10,0:10:27.58:28,0,285	0/0:13,0:13:22.47:0,22,407	0/0:12,0:12:19.22:0,19,370	1/1:8,1:8:1.27:52,1,0	1/1:4,0:4:4.88:50,5,0	0/0:9,0:6:17.87:0,18,161	1/1:5,0:5:2.96:29,3,0	1/1:5,0:3:0.47:1,0,0	0/0:13,0:13:32.30:0,32,624	1/1:7,3:10:2.96:20,3,0	1/1:10,1:10:6.53:35,7,0	0/0:8,0:8:3.38:0,3,368	0/1:9,0:10:10.95:11,0,235	0/0:4,0:3:5.93:0,6,46	./.
chr10	70166724	.	TCACAGA	T	981.39	PASS	AB=0.986;AC=26;AF=0.500;AN=52;BaseQRankSum=4.278;DP=417;FS=28.387;HRun=0;HaplotypeScore=88.5546;InbreedingCoeff=0.4209;MQ=54.59;MQ0=17;MQRankSum=-5.213;QD=4.72;ReadPosRankSum=-1.970;VQSLOD=0.0535;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:18:6.48:78,6,0	./.	0/0:32,0:11:9.89:0,10,131	0/0:43,0:16:22.93:0,23,147	1/1:14,0:13:2.90:22,3,0	0/1:22,0:19:47.57:84,0,48	0/0:28,0:26:44.56:0,45,474	1/1:15,0:9:20.66:130,21,0	0/0:11,0:11:27.06:0,27,578	0/0:12,0:12:30.99:0,31,487	0/1:17,0:16:17.01:17,0,378	0/1:14,0:14:19.02:19,0,473	0/0:10,0:10:6.96:0,7,410	0/0:10,0:10:14.52:0,15,291	0/1:12,0:12:50.19:50,0,190	0/0:15,0:15:35.83:0,36,596	0/1:10,1:10:3:164,0,3	1/1:7,0:6:11.86:60,12,0	1/1:5,0:5:7.50:46,7,0	1/1:9,2:13:5.99:135,6,0	./.	0/0:17,0:17:13.86:0,14,539	0/0:14,0:13:1.18:0,1,3	1/1:18,0:16:8.77:74,9,0	0/1:15,0:15:1.92:2,0,670	1/1:13,0:13:29.08:175,29,0	1/1:7,0:6:2.73:17,3,0	1/1:4,1:4:5.95:85,6,0
chr10	70166727	.	CAG	C	1278.63	PASS	AB=0.976;AC=33;AF=0.635;AN=52;BaseQRankSum=6.152;DP=395;FS=5.249;HRun=0;HaplotypeScore=66.7123;InbreedingCoeff=0.1601;MQ=54.55;MQ0=16;MQRankSum=-3.745;QD=4.81;ReadPosRankSum=-2.065;VQSLOD=1.1691;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,1:16:6.01:62,6,0	./.	0/0:26,0:11:9.89:0,10,131	0/0:35,0:14:22.93:0,23,147	1/1:14,0:13:2.99:24,3,0	0/1:19,0:16:47.57:76,0,48	0/0:26,1:25:44.56:0,45,383	1/1:14,0:8:20.66:130,21,0	0/0:13,0:13:13.35:0,13,231	0/0:13,0:13:18.90:0,19,286	0/1:17,0:16:20.11:20,0,174	0/1:14,0:14:79.69:80,0,91	0/1:11,0:11:4.72:5,0,115	0/1:9,2:11:25.70:26,0,104	0/1:13,0:13:19.88:103,0,20	0/1:14,1:15:22.07:22,0,238	1/1:10,1:10:17.89:172,18,0	1/1:6,0:5:14.59:86,15,0	1/1:4,0:4:7.50:46,7,0	1/1:13,0:13:5.83:65,6,0	./.	0/1:16,0:16:5.64:6,0,252	1/1:11,1:11:3.01:43,3,0	1/1:19,0:17:11.99:114,12,0	0/1:16,0:16:96.83:97,0,220	1/1:12,0:12:34.02:209,34,0	1/1:7,0:6:2.67:18,3,0	1/1:4,0:3:5.95:48,6,0
chr10	70167932	.	A	AAT	73.95	PASS	AB=0.974;AC=5;AF=0.50;AN=10;BaseQRankSum=0.361;DP=171;FS=3.522;HRun=0;HaplotypeScore=23.0207;MQ=87.77;MQ0=2;MQRankSum=-0.361;QD=1.30;ReadPosRankSum=-0.361;VQSLOD=0.4902;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/1:17,0:11:0:0,0,0	./.	./.	./.	0/1:21,0:23:7.54:8,0,8	./.	./.	./.	./.	./.	./.	./.	./.	0/1:10,0:12:31.95:92,0,32	0/0:12,0:13:2.84:0,3,14	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:1,3:4:3.01:45,3,0
chr10	70168819	.	GCA	G	494.16	PASS	AB=0.835;AC=30;AF=0.750;AN=40;BaseQRankSum=2.759;DP=376;FS=0.000;HRun=0;HaplotypeScore=71.0815;InbreedingCoeff=0.1908;MQ=62.13;MQ0=16;MQRankSum=-2.220;QD=2.50;ReadPosRankSum=-0.860;VQSLOD=1.6260;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:2.84:14,3,0	1/1:4,0:4:8.52:42,9,0	./.	./.	1/1:9,0:9:2.84:14,3,0	0/1:15,3:18:22.98:23,0,57	0/1:21,10:30:4.75:102,0,5	./.	1/1:3,0:7:5.68:28,6,0	./.	1/1:9,0:10:2.83:14,3,0	0/0:7,0:7:9.02:0,9,113	1/1:8,2:10:6.01:64,6,0	1/1:7,3:10:3:32,3,0	1/1:8,3:13:14.70:124,15,0	0/1:9,0:10:8.11:8,0,18	1/1:14,0:14:5.68:28,6,0	./.	0/1:7,0:9:1.57:9,0,2	1/1:7,0:8:2.84:14,3,0	./.	0/0:10,0:9:9.03:0,9,127	1/1:5,0:5:5.68:28,6,0	1/1:16,0:16:8.52:42,9,0	./.	1/1:5,0:9:5.68:28,6,0	0/0:3,0:10:0.89:0,1,2	./.
chr10	70168820	.	C	CATGG	1171.98	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=6.672;DP=382;FS=3.331;HRun=0;HaplotypeScore=83.2876;InbreedingCoeff=0.7121;MQ=61.35;MQ0=16;MQRankSum=-4.193;QD=12.74;ReadPosRankSum=-0.095;VQSLOD=3.1421;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:6.01:80,6,0	1/1:4,0:4:12.02:157,12,0	0/0:35,0:16:48.14:0,48,868	0/0:49,0:30:74.31:0,74,1249	1/1:9,0:9:6:80,6,0	0/0:18,0:17:26.93:0,27,430	0/0:30,0:29:60.10:0,60,1056	1/1:8,0:6:18.02:321,18,0	0/0:7,0:7:9.03:0,9,136	0/0:7,0:6:18.06:0,18,356	0/0:11,0:11:27.09:0,27,509	0/0:8,0:8:21.07:0,21,409	0/0:10,0:10:24.06:0,24,398	0/0:11,0:11:21.07:0,21,381	0/0:14,0:14:39.13:0,39,671	0/1:10,0:10:9.72:104,0,10	1/1:15,0:15:6.18:422,6,0	0/0:12,0:12:18.01:0,18,305	0/0:9,0:9:9.10:0,9,378	0/0:10,0:9:18.06:0,18,324	0/0:24,0:24:51.16:0,51,940	0/0:11,0:10:21.07:0,21,413	1/1:5,0:5:5.70:51,6,0	1/1:7,9:16:11.98:124,12,0	0/0:10,0:10:24.08:0,24,469	0/0:9,0:9:27.09:0,27,466	0/1:11,0:10:14.09:14,0,53	0/0:5,0:3:8.62:0,9,128
chr10	70168821	.	A	ATG	924.91	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=7.093;DP=380;FS=0.000;HRun=0;HaplotypeScore=72.5421;InbreedingCoeff=0.8762;MQ=60.05;MQ0=16;MQRankSum=-4.921;QD=11.42;ReadPosRankSum=-0.173;VQSLOD=3.0639;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:14:5.98:56,6,0	1/1:4,0:4:11.95:113,12,0	0/0:35,0:16:48.14:0,48,719	0/0:47,0:29:51.08:0,51,948	1/1:2,7:9:5.97:55,6,0	0/0:18,0:17:23.97:0,24,314	0/0:30,0:29:28.20:0,28,725	1/1:2,5:6:18.02:215,18,0	0/0:7,0:7:9.01:0,9,97	0/0:7,0:6:18.06:0,18,282	0/0:11,0:11:27.08:0,27,385	0/0:8,0:8:21.07:0,21,317	0/0:10,0:10:24.02:0,24,295	0/0:11,0:11:21.04:0,21,278	0/0:14,0:14:39.05:0,39,482	1/1:10,0:10:19.83:249,20,0	1/1:15,0:15:17.80:296,18,0	0/0:12,0:12:15.05:0,15,216	0/0:8,0:8:21.05:0,21,283	0/0:10,0:9:18.04:0,18,238	0/0:24,0:24:51.16:0,51,739	0/0:11,0:10:21.07:0,21,318	1/1:3,2:5:5.63:40,6,0	1/1:16,0:16:11.86:91,12,0	0/0:10,0:10:24.08:0,24,358	0/0:9,0:9:27.06:0,27,364	0/0:11,0:10:5.93:0,6,63	0/0:5,0:3:6.02:0,6,90
chr10	70168839	.	ACACACACACACACACAC	A	1391.59	PASS	AB=0.846;AC=11;AF=0.196;AN=56;BaseQRankSum=5.787;DP=365;FS=20.846;HRun=0;HaplotypeScore=137.8065;InbreedingCoeff=0.7603;MQ=48.91;MQ0=15;MQRankSum=-4.735;QD=29.61;ReadPosRankSum=2.751;VQSLOD=1.0805;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,2:12:9.25:158,9,0	1/1:0,3:3:9.03:371,9,0	0/0:23,0:7:21.07:0,21,347	0/0:30,0:15:36.12:0,36,607	1/1:5,2:7:5.98:143,6,0	0/0:20,0:19:23.71:0,24,1131	0/0:31,0:30:60.20:0,60,2141	0/0:4,0:2:5.92:0,6,38	0/0:9,0:9:12.04:0,12,319	0/0:11,0:10:30.10:0,30,1298	0/0:10,0:10:24.08:0,24,1432	0/0:11,0:11:33.11:0,33,1967	0/0:13,0:13:33.11:0,33,1556	0/0:14,0:14:20.66:0,21,1279	0/0:14,0:14:33.11:0,33,1509	0/0:14,0:14:30.10:0,30,1169	0/1:9,2:11:14.15:242,0,14	0/0:13,0:12:21.07:0,21,374	0/0:7,0:7:21.07:0,21,512	0/0:10,0:9:18.04:0,18,323	0/0:24,0:24:51.02:0,51,1388	0/0:12,0:11:21.07:0,21,1395	1/1:0,3:3:6.02:246,6,0	1/1:6,5:11:12:389,12,0	0/0:13,0:13:30.10:0,30,1340	0/0:13,0:13:39.13:0,39,881	0/0:17,0:16:21.03:0,21,447	0/0:5,0:3:9.03:0,9,238
chr10	70169281	.	CT	C	13868.52	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=16.856;DP=808;FS=8.983;HRun=2;HaplotypeScore=102.8457;InbreedingCoeff=0.9989;MQ=87.29;MQ0=0;MQRankSum=-3.760;QD=35.56;ReadPosRankSum=1.398;VQSLOD=4.5148;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,48:49:99:1831,141,0	1/1:0,18:18:54.18:701,54,0	0/0:37,0:37:98.19:0,98,1277	0/0:29,0:29:81.25:0,81,1177	1/1:0,21:21:53.97:700,54,0	0/0:23,0:23:69.23:0,69,1034	0/0:24,0:24:72.24:0,72,1061	1/1:1,25:26:75.23:959,75,0	0/0:24,0:24:72.24:0,72,1079	0/0:35,1:36:69.37:0,69,1497	0/0:32,0:32:91.67:0,92,1283	0/0:34,0:34:99:0,99,1483	0/0:39,0:39:99:0,117,1754	0/0:36,0:36:99:0,108,1599	0/0:30,0:30:90.30:0,90,1347	0/0:27,0:27:81.27:0,81,1213	1/1:1,44:45:99:1363,105,0	1/1:0,22:22:63.20:818,63,0	1/1:0,26:26:78.24:998,78,0	1/1:1,20:21:54.18:701,54,0	1/1:0,36:36:99:1324,102,0	0/0:25,0:25:75.24:0,75,1104	1/1:1,23:24:63.20:818,63,0	1/1:0,31:31:84.27:1091,84,0	0/0:22,0:22:66.20:0,66,961	1/1:1,21:22:18.22:734,18,0	1/1:0,27:27:75.24:974,75,0	1/1:0,22:22:66.21:856,66,0
chr10	70169617	.	C	CAT	20065.79	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-2.943;DP=729;FS=4.989;HRun=0;HaplotypeScore=103.5831;InbreedingCoeff=0.9997;MQ=81.18;MQ0=3;MQRankSum=-3.142;QD=50.54;ReadPosRankSum=1.675;VQSLOD=5.5120;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,41:46:99:2293,120,0	1/1:1,19:20:48.16:927,48,0	0/0:13,0:14:24.57:0,25,555	0/0:26,0:26:53.21:0,53,918	1/1:1,28:28:75.26:1445,75,0	0/0:27,0:27:81.26:0,81,1219	0/0:18,0:18:51.17:0,51,781	1/1:0,26:26:78.25:1456,78,0	0/0:21,0:21:60.19:0,60,897	0/0:33,0:33:96.32:0,96,1451	0/0:25,0:25:75.20:0,75,1101	0/0:22,0:22:63.21:0,63,964	0/0:23,0:23:69.23:0,69,1054	0/0:21,0:21:60.20:0,60,918	0/0:25,0:24:69.23:0,69,1037	0/0:24,0:24:72.24:0,72,1082	1/1:2,31:33:81.28:1542,81,0	1/1:2,27:28:69.24:1332,69,0	1/1:5,20:26:66.21:1209,66,0	1/1:0,26:26:69.24:1332,69,0	1/1:1,32:33:93.32:1794,93,0	0/0:29,0:29:81.28:0,81,1239	1/1:1,17:17:51.17:982,51,0	1/1:2,26:28:78.27:1483,78,0	0/0:24,0:24:72.24:0,72,1101	1/1:2,28:30:41.34:1535,41,0	1/1:1,27:28:75.26:1441,75,0	1/1:0,23:25:69.24:1294,69,0
chr10	70170298	.	AAGGG	A	7406.15	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=16.337;DP=749;FS=1.107;HRun=0;HaplotypeScore=129.0588;InbreedingCoeff=0.9994;MQ=78.12;MQ0=0;MQRankSum=-4.932;QD=37.40;ReadPosRankSum=1.887;VQSLOD=5.2294;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,44:57:99:1816,102,0	1/1:0,9:9:27.09:480,27,0	0/0:20,0:20:39.13:0,39,969	0/0:27,0:27:63.19:0,63,1480	1/1:2,22:24:60.16:1034,60,0	0/0:32,0:32:87.30:0,87,2226	0/0:31,0:31:84.27:0,84,2115	1/1:2,21:23:60.16:1034,60,0	0/0:32,0:32:87.28:0,87,2189	0/0:20,0:20:57.20:0,57,1471	0/0:23,0:23:57.18:0,57,1415	0/0:32,0:32:87.30:0,87,2206	0/0:39,0:39:99:0,99,2547	0/0:26,0:26:72.25:0,72,1851	0/0:34,0:34:93.32:0,93,2355	0/0:30,0:30:84.27:0,84,2082	1/1:6,27:33:54.18:961,54,0	0/0:19,0:19:45.05:0,45,1162	0/0:18,0:18:39.13:0,39,948	0/0:29,0:29:66.23:0,66,1618	0/0:24,0:24:72.25:0,72,1790	0/0:16,0:16:39.13:0,39,963	1/1:1,16:17:45.15:800,45,0	1/1:5,30:35:72.25:1281,72,0	0/0:30,0:30:81.28:0,81,2091	0/0:31,1:32:39.88:0,40,2171	0/0:28,0:28:78.25:0,78,1943	0/0:9,0:9:24.08:0,24,619
chr10	70170573	.	TTCTCTCTC	T	326.82	PASS	AB=0.970;AC=7;AF=0.159;AN=44;BaseQRankSum=1.149;DP=520;FS=10.239;HRun=0;HaplotypeScore=136.6055;InbreedingCoeff=0.0444;MQ=62.34;MQ0=17;MQRankSum=1.371;QD=3.00;ReadPosRankSum=2.335;VQSLOD=2.1325;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,1:22:7.36:68,0,7	./.	0/0:17,0:14:0.47:0,0,1	./.	./.	0/0:18,0:17:9.02:0,9,148	0/0:13,0:14:3.48:0,3,51	./.	0/0:13,0:13:3.48:0,3,84	0/0:26,0:26:11.91:0,12,199	./.	0/0:19,0:19:9.92:0,10,288	0/0:20,0:20:6.02:0,6,209	0/0:17,0:17:6.04:0,6,50	0/1:19,0:18:57.36:69,0,57	0/0:22,0:21:9.02:0,9,170	0/1:13,1:13:39.80:68,0,40	0/1:12,0:11:36.34:137,0,36	0/0:21,0:21:10.83:0,11,200	0/0:30,0:29:0.89:0,1,2	0/1:24,0:22:22.72:23,0,132	0/0:11,2:13:0.47:0,0,1	./.	1/1:17,0:18:3.48:74,3,0	0/0:23,0:22:1.82:0,2,5	0/0:14,0:14:9.03:0,9,277	0/0:22,0:21:12.04:0,12,252	0/0:13,0:12:3.46:0,3,24
chr10	70170626	.	T	TCACACACA	4027.79	PASS	AB=1.000;AC=23;AF=0.442;AN=52;BaseQRankSum=6.746;DP=478;FS=8.722;HRun=0;HaplotypeScore=127.6270;InbreedingCoeff=0.8287;MQ=43.88;MQ0=44;MQRankSum=1.426;QD=18.91;ReadPosRankSum=0.379;VQSLOD=2.2214;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,7:27:7.38:134,7,0	0/0:6,0:5:12.04:0,12,286	./.	./.	1/1:15,0:13:14.73:320,15,0	0/0:25,0:19:26.77:0,27,652	0/0:20,0:19:14.30:0,14,337	0/0:25,0:24:19.71:0,20,462	0/0:16,0:16:23.61:0,24,548	0/0:14,0:12:30.06:0,30,666	0/0:20,0:18:33.10:0,33,665	0/0:21,0:19:27.56:0,28,652	0/0:15,0:15:36.09:0,36,719	0/0:19,0:19:2.54:0,3,325	0/0:17,0:17:33.10:0,33,731	0/0:21,0:18:30.57:0,31,742	1/1:22,0:16:6.88:268,7,0	1/1:14,0:13:18.06:428,18,0	1/1:7,0:7:6.48:76,6,0	1/1:21,0:20:21.06:321,21,0	1/1:16,0:12:11.86:210,12,0	0/0:16,0:14:12.51:0,13,292	1/1:18,0:15:22.77:523,23,0	1/1:22,0:21:21.65:529,22,0	0/0:26,0:25:52.12:0,52,1171	0/1:19,0:17:25.87:554,0,26	1/1:18,0:18:29.13:480,29,0	1/1:11,0:8:14.98:183,15,0
chr10	70170966	.	CTCTCTCTCTCTT	C	548.32	PASS	AB=1.000;AC=11;AF=0.220;AN=50;BaseQRankSum=-0.714;DP=597;FS=1.375;HRun=0;HaplotypeScore=160.4829;InbreedingCoeff=-0.1049;MQ=54.41;MQ0=12;MQRankSum=-0.531;QD=2.57;ReadPosRankSum=-5.719;VQSLOD=0.9519;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,30:40:6.02:177,6,0	./.	0/1:23,0:7:8:8,0,60	0/0:42,0:10:8.26:0,8,84	./.	0/0:30,0:29:68.80:0,69,2376	0/0:21,0:21:47.64:0,48,2058	0/1:22,0:22:99:211,0,110	0/0:16,0:16:41.11:0,41,1400	0/0:27,0:25:66.13:0,66,1957	0/0:11,0:11:17.60:0,18,479	0/0:15,0:15:29.88:0,30,914	0/0:25,0:25:48.27:0,48,1749	0/0:24,0:24:50.80:0,51,2000	0/0:27,0:27:60.92:0,61,1799	0/0:22,0:22:36.55:0,37,1132	0/1:25,0:24:50.78:51,0,347	0/0:21,0:20:3.01:0,3,66	0/1:18,0:15:39.23:39,0,193	0/1:14,0:14:12.91:13,0,220	0/1:26,0:26:48.33:48,0,767	0/0:22,0:22:42.02:0,42,1262	./.	0/0:35,0:35:9.03:0,9,197	0/0:31,0:31:62.09:0,62,1896	0/1:13,0:13:53.16:53,0,358	0/1:24,0:22:51.20:51,0,1025	0/1:8,0:8:37.34:37,0,208
chr10	70170974	.	CTCTT	C	1648.21	PASS	AB=1.000;AC=19;AF=0.365;AN=52;BaseQRankSum=0.715;DP=567;FS=4.039;HRun=0;HaplotypeScore=89.2351;InbreedingCoeff=0.4784;MQ=59.78;MQ0=10;MQRankSum=0.431;QD=7.29;ReadPosRankSum=-2.086;VQSLOD=1.7562;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:5.95:51,6,0	./.	0/0:26,0:11:1.94:0,2,145	0/0:34,0:10:3.22:0,3,107	./.	0/0:31,0:30:31.39:0,31,1030	0/0:24,0:24:41.16:0,41,1039	1/1:20,0:20:30.30:339,30,0	0/0:17,0:17:47.19:0,47,756	0/0:28,0:26:65.56:0,66,810	0/0:8,0:8:17.59:0,18,191	0/0:16,0:16:36.95:0,37,433	0/0:26,0:26:53.78:0,54,691	0/0:21,0:21:52.46:0,52,727	0/0:28,0:28:32.86:0,33,806	0/0:22,0:22:39.53:0,40,530	1/1:26,0:25:50.89:409,51,0	1/1:2,19:20:3.01:56,3,0	1/1:10,0:7:2.90:91,3,0	0/1:13,0:13:1.45:85,0,1	0/1:21,0:21:99:142,0,115	0/0:20,0:20:46.20:0,46,560	1/1:3,0:3:3:25,3,0	1/1:0,36:36:9.03:170,9,0	0/0:28,0:28:55.59:0,56,803	0/1:14,0:14:3.22:193,0,3	0/1:21,0:19:78.63:175,0,79	0/1:6,0:6:26.11:83,0,26
chr10	70170976	.	CTT	C	1891.65	PASS	AB=1.000;AC=25;AF=0.481;AN=52;BaseQRankSum=1.982;DP=564;FS=4.405;HRun=3;HaplotypeScore=73.5449;InbreedingCoeff=0.7963;MQ=61.54;MQ0=7;MQRankSum=-1.850;QD=7.88;ReadPosRankSum=-0.703;VQSLOD=0.0012;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:5.90:37,6,0	./.	0/0:27,0:12:4.88:0,5,181	0/0:33,0:12:5.83:0,6,142	./.	0/0:30,0:30:28.96:0,29,767	0/0:25,0:25:44.15:0,44,824	1/1:4,16:20:32.45:344,32,0	0/0:17,0:17:47.19:0,47,595	0/0:27,0:25:39.67:0,40,620	0/0:8,0:8:17.25:0,17,120	0/1:15,0:15:0.07:0,0,313	0/0:28,0:28:34.08:0,34,481	0/0:21,0:21:31.54:0,32,433	0/0:29,0:29:35.70:0,36,666	0/0:22,0:22:29.05:0,29,374	1/1:24,0:23:50.42:408,50,0	1/1:21,0:20:3:25,3,0	1/1:9,0:7:16.23:132,16,0	1/1:14,0:14:15.40:126,15,0	1/1:21,0:21:5.43:219,5,0	0/0:18,0:18:15.60:0,16,361	1/1:4,0:4:5.99:50,6,0	1/1:36,0:36:8.99:75,9,0	0/0:28,0:28:44.25:0,44,561	1/1:13,0:13:22.58:233,23,0	1/1:23,0:22:23.78:354,24,0	1/1:5,0:5:0.34:83,0,0
chr10	70172130	.	TG	T	619.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.692;DP=715;FS=10.845;HRun=1;HaplotypeScore=83.6799;InbreedingCoeff=0.9679;MQ=85.31;MQ0=0;MQRankSum=-2.172;QD=36.46;ReadPosRankSum=1.492;VQSLOD=3.3882;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,135,2152	0/0:4,0:4:11.96:0,12,161	0/0:27,0:27:78.22:0,78,1141	0/0:23,0:23:66.17:0,66,1008	0/0:28,0:28:84.26:0,84,1294	0/0:18,0:18:54.17:0,54,840	0/0:25,0:25:69.22:0,69,1063	0/0:31,0:31:93.27:0,93,1457	0/0:19,0:19:54.18:0,54,862	0/0:23,0:23:69.23:0,69,1078	0/0:25,0:25:75.26:0,75,1197	0/0:21,0:21:60.20:0,60,949	0/0:30,0:30:90.31:0,90,1437	0/0:27,0:27:72.24:0,72,1150	0/0:30,0:30:87.30:0,87,1387	0/0:25,0:25:75.24:0,75,1176	0/0:17,0:17:51.17:0,51,801	1/1:0,17:17:51.17:715,51,0	0/0:18,0:18:54.18:0,54,862	0/0:29,0:29:87.27:0,87,1359	0/0:52,0:52:99:0,156,2410	0/0:28,0:28:84.29:0,84,1337	0/0:22,0:22:60.19:0,60,919	0/0:38,0:38:99:0,108,1650	0/0:20,0:20:60.20:0,60,959	0/0:32,0:32:96.33:0,96,1521	0/0:30,0:30:90.29:0,90,1404	0/0:8,0:8:24.08:0,24,383
chr10	70172200	.	C	CT	1220.79	PASS	AB=0.893;AC=13;AF=0.232;AN=56;BaseQRankSum=10.646;DP=578;FS=8.038;HRun=1;HaplotypeScore=99.2625;InbreedingCoeff=0.6611;MQ=46.64;MQ0=51;MQRankSum=-2.433;QD=7.83;ReadPosRankSum=-2.031;VQSLOD=-0.1899;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,2:30:52.77:355,53,0	1/1:4,0:3:5.56:30,6,0	0/0:46,0:7:21:0,21,251	0/0:47,0:7:12.04:0,12,149	1/1:19,0:18:28.27:158,28,0	0/0:15,0:14:36.56:0,37,450	0/0:36,0:31:78.53:0,79,959	0/1:27,1:25:99:194,0,149	0/0:18,0:17:28.59:0,29,334	0/0:23,0:21:54.14:0,54,670	0/0:15,0:15:36.10:0,36,442	0/0:14,0:14:30.01:0,30,367	0/0:18,0:17:33.03:0,33,409	0/0:18,0:16:38.76:0,39,444	0/0:18,0:18:41.98:0,42,513	0/0:17,0:17:42.06:0,42,510	0/1:15,3:17:19.26:186,0,19	0/1:15,3:18:64.54:105,0,65	0/0:16,0:11:33.07:0,33,406	0/0:13,0:12:21.05:0,21,258	0/0:27,0:23:57.11:0,57,701	0/0:25,0:25:62.71:0,63,739	1/1:15,1:14:25.49:187,25,0	1/1:20,1:19:28.30:184,28,0	0/0:8,0:6:15.04:0,15,183	0/0:27,0:25:70.42:0,70,878	0/0:11,0:11:30.10:0,30,386	0/0:9,0:6:12.51:0,13,156
chr10	70172201	.	TCC	T	2822.86	PASS	AB=0.783;AC=15;AF=0.268;AN=56;BaseQRankSum=9.891;DP=582;FS=6.950;HRun=2;HaplotypeScore=90.4019;InbreedingCoeff=0.8718;MQ=46.20;MQ0=52;MQRankSum=-0.758;QD=18.45;ReadPosRankSum=-1.765;VQSLOD=0.4529;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,10:26:50.61:573,51,0	1/1:1,3:3:5.98:68,6,0	0/0:46,0:7:19.31:0,19,335	0/0:47,0:7:11.73:0,12,212	1/1:12,6:17:28.91:344,29,0	0/0:15,0:14:36.98:0,37,669	0/0:40,0:35:77.93:0,78,1394	1/1:18,9:24:17.32:526,17,0	0/0:15,0:16:30.26:0,30,519	0/0:23,0:21:60.87:0,61,996	0/0:15,0:15:36.10:0,36,643	0/0:13,0:13:28.34:0,28,505	0/0:18,0:17:32.47:0,32,583	0/0:18,0:16:31.63:0,32,588	0/0:17,0:17:42.08:0,42,731	0/0:17,0:17:42.02:0,42,750	1/1:17,2:18:19.60:404,20,0	0/1:13,5:18:32.46:418,0,32	0/0:16,0:11:33.11:0,33,580	0/0:15,0:13:24.06:0,24,401	0/0:27,0:23:57.18:0,57,1058	0/0:28,0:27:62.59:0,63,1033	1/1:13,4:15:29.65:309,30,0	1/1:14,6:20:31.34:376,31,0	0/0:8,0:6:16.29:0,16,273	0/0:28,0:26:73.40:0,73,1354	0/0:12,0:12:30.10:0,30,581	0/0:9,0:6:11.69:0,12,242
chr10	70172202	.	C	CT	1027.15	PASS	AB=0.964;AC=15;AF=0.268;AN=56;BaseQRankSum=11.778;DP=582;FS=8.185;HRun=1;HaplotypeScore=100.7741;InbreedingCoeff=0.6379;MQ=46.21;MQ0=52;MQRankSum=-1.370;QD=6.11;ReadPosRankSum=-1.516;VQSLOD=-0.3652;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:27:27.89:237,28,0	1/1:4,0:3:5.56:30,6,0	0/0:45,0:7:20.80:0,21,263	0/0:46,0:7:12.04:0,12,168	1/1:18,0:17:22.59:122,23,0	0/0:16,0:15:36.58:0,37,485	0/0:38,1:34:48.59:0,49,959	0/1:25,0:22:99:117,0,185	0/1:16,1:16:99:128,0,304	0/0:25,0:23:44.64:0,45,696	0/0:15,0:15:33.11:0,33,448	0/0:13,0:13:27.98:0,28,377	0/0:17,1:17:12.60:0,13,384	0/0:18,0:16:24.32:0,24,410	0/0:17,0:17:38.79:0,39,524	0/0:17,0:17:42.08:0,42,546	1/1:18,1:18:6.13:235,6,0	0/1:17,1:18:76.36:76,0,127	0/0:16,0:11:33.11:0,33,457	0/0:15,0:13:23.79:0,24,282	0/0:27,0:23:57.17:0,57,763	0/0:27,0:26:58.36:0,58,752	1/1:16,0:14:6.60:65,7,0	1/1:20,2:20:35.67:199,36,0	0/0:9,0:7:7.68:0,8,184	0/0:30,0:28:70.28:0,70,965	0/0:12,0:12:30.10:0,30,416	0/0:9,0:6:12.51:0,13,168
chr10	70172264	.	A	AT	4019.85	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-7.927;DP=498;FS=1.462;HRun=4;HaplotypeScore=62.3071;InbreedingCoeff=0.9974;MQ=72.58;MQ0=1;MQRankSum=-1.091;QD=30.92;ReadPosRankSum=-0.066;VQSLOD=3.7962;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:30:66.13:860,66,0	1/1:0,7:7:18.06:246,18,0	0/0:16,0:14:29.10:0,29,396	0/0:17,1:12:32.08:0,32,332	1/1:2,20:22:57.03:778,57,0	0/0:11,0:11:24.07:0,24,272	0/0:22,0:22:57.16:0,57,647	1/1:3,23:25:63.17:827,63,0	0/0:12,0:12:36.10:0,36,408	0/0:27,0:27:69.18:0,69,775	0/0:17,0:17:48.14:0,48,544	0/0:11,0:11:33.09:0,33,374	0/0:18,0:18:48.13:0,48,539	0/0:15,0:15:39.11:0,39,442	0/0:15,0:15:42.12:0,42,476	0/0:11,0:11:33.07:0,33,356	1/1:3,14:17:33.11:451,33,0	0/0:23,0:23:63.15:0,63,698	0/0:15,0:15:39.11:0,39,443	0/0:32,0:32:78.22:0,78,884	0/0:12,0:12:27.08:0,27,306	0/0:22,0:22:60.17:0,60,680	1/1:2,9:11:30.10:406,30,0	1/1:1,16:17:33.11:452,33,0	0/0:16,0:16:48.13:0,48,540	0/0:28,1:29:46.20:0,46,912	0/0:12,0:12:36.05:0,36,384	0/0:13,0:13:33.09:0,33,374
chr10	70173467	.	G	GC	4555.18	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-10.836;DP=594;FS=2.188;HRun=6;HaplotypeScore=55.1680;InbreedingCoeff=0.9977;MQ=64.33;MQ0=0;MQRankSum=-0.020;QD=30.17;ReadPosRankSum=1.426;VQSLOD=5.5402;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,33:40:84.27:1055,84,0	1/1:2,6:8:18.06:227,18,0	0/0:30,0:25:60.75:0,61,666	0/0:28,0:25:59.53:0,60,567	1/1:0,15:15:39.12:490,39,0	0/0:21,0:21:57.13:0,57,582	0/0:27,0:27:63.13:0,63,643	1/1:3,15:18:45.14:566,45,0	0/0:20,0:20:54.12:0,54,551	0/0:21,0:21:51.10:0,51,508	0/0:18,0:18:51.12:0,51,520	0/0:23,0:23:66.13:0,66,666	0/0:21,0:21:57.11:0,57,574	0/0:23,0:23:66.12:0,66,660	0/0:13,0:13:36.08:0,36,367	0/0:19,0:19:51.10:0,51,514	1/1:4,29:33:84.27:1056,84,0	0/0:25,0:25:72.16:0,72,735	0/0:17,0:17:48.11:0,48,490	0/0:18,0:18:51.12:0,51,520	0/0:24,0:24:60.13:0,60,612	0/0:21,0:21:57.11:0,57,575	1/1:1,18:19:51.16:639,51,0	1/1:5,13:18:42.13:521,42,0	0/0:26,0:26:69.15:0,69,704	0/0:25,0:25:72.16:0,72,729	0/0:16,0:16:42.10:0,42,428	0/0:7,0:7:21.05:0,21,214
chr10	70174820	.	GACAT	G	13114.56	PASS	AB=0.525;AC=27;AF=0.482;AN=56;BaseQRankSum=16.242;DP=622;FS=5.257;HRun=0;HaplotypeScore=110.6200;InbreedingCoeff=0.9101;MQ=76.32;MQ0=2;MQRankSum=-6.763;QD=42.03;ReadPosRankSum=2.093;VQSLOD=4.9540;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,34:38:72.25:1323,72,0	1/1:0,13:13:36.12:644,36,0	0/0:18,0:18:4.65:0,5,1129	0/0:10,0:10:30.10:0,30,779	1/1:1,24:25:69.24:1247,69,0	0/0:21,0:21:60.21:0,60,1553	0/0:33,0:33:96.29:0,96,2392	1/1:4,24:28:72.25:1317,72,0	0/0:11,0:11:27.09:0,27,681	0/0:29,0:29:81.28:0,81,2138	0/0:21,0:21:57.15:0,57,1391	0/0:17,0:17:48.16:0,48,1258	0/0:23,0:23:63.22:0,63,1624	0/0:28,0:28:84.29:0,84,2193	0/0:30,0:30:87.28:0,87,2204	0/0:18,0:18:51.18:0,51,1316	1/1:1,20:21:54.19:993,54,0	1/1:1,25:26:63.15:1122,63,0	1/1:1,13:14:39.10:636,39,0	1/1:4,22:26:51.17:937,51,0	1/1:1,13:14:24.08:441,24,0	0/0:30,0:30:84.25:0,84,2009	1/1:3,19:22:45.12:828,45,0	1/1:4,28:31:72.25:1324,72,0	0/0:21,0:21:63.22:0,63,1664	0/1:2,19:20:22.07:924,0,22	1/1:1,20:21:48.01:882,48,0	1/1:0,10:10:27.09:496,27,0
chr10	70175796	.	TG	T	43.11	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.549;DP=584;FS=18.782;HRun=1;HaplotypeScore=63.0018;InbreedingCoeff=0.9716;MQ=89.51;MQ0=0;MQRankSum=-3.284;QD=7.19;ReadPosRankSum=0.275;VQSLOD=-0.7550;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,160,2480	0/0:8,0:8:24.07:0,24,360	0/0:21,0:21:60.17:0,60,901	0/0:23,1:24:54.31:0,54,855	0/0:15,0:15:45.15:0,45,702	0/0:20,0:20:60.20:0,60,958	0/0:22,0:22:66.23:0,66,1055	0/0:27,0:27:81.28:0,81,1296	0/0:19,0:19:57.19:0,57,893	0/0:22,0:22:60.20:0,60,959	0/0:5,0:5:15.05:0,15,240	0/0:29,0:29:87.28:0,87,1368	0/0:22,0:22:66.23:0,66,1050	0/0:25,0:25:75.26:0,75,1197	0/0:16,0:16:48.16:0,48,767	0/0:27,0:27:81.24:0,81,1241	0/0:37,0:37:99:0,111,1767	1/1:0,6:6:17.88:134,18,0	0/0:21,0:21:63.21:0,63,1008	0/0:13,0:13:39.13:0,39,620	0/0:50,0:50:99:0,144,2276	0/0:11,0:11:33.11:0,33,528	0/0:11,0:11:33.10:0,33,505	0/0:18,0:18:54.18:0,54,858	0/0:14,0:14:42.12:0,42,643	0/0:20,0:20:60.20:0,60,959	0/0:19,0:19:54.18:0,54,863	0/0:8,0:8:24.08:0,24,384
chr10	70175800	.	T	TA	56.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.550;DP=591;FS=11.881;HRun=0;HaplotypeScore=64.5949;InbreedingCoeff=0.9811;MQ=90.29;MQ0=0;MQRankSum=-3.286;QD=9.44;ReadPosRankSum=0.704;VQSLOD=2.7710;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,153,2110	0/0:7,0:7:21.07:0,21,294	0/0:22,0:22:60.15:0,60,761	0/0:24,0:24:54.93:0,55,779	0/0:15,0:15:45.15:0,45,629	0/0:21,0:21:63.20:0,63,860	0/0:22,0:22:66.21:0,66,906	0/0:28,0:28:84.27:0,84,1160	0/0:20,0:20:57.18:0,57,780	0/0:22,0:22:60.19:0,60,824	0/0:7,0:7:21.06:0,21,278	0/0:30,0:30:90.28:0,90,1222	0/0:21,0:21:63.21:0,63,878	0/0:25,0:25:75.25:0,75,1047	0/0:17,0:17:51.16:0,51,696	0/0:24,0:24:72.21:0,72,973	0/0:37,0:37:99:0,111,1511	1/1:0,6:6:17.96:147,18,0	0/0:24,0:24:69.17:0,69,884	0/0:13,0:13:36.12:0,36,502	0/0:49,0:49:99:0,144,1997	0/0:14,0:14:42.10:0,42,537	0/0:10,0:10:30.10:0,30,418	0/0:18,0:18:51.17:0,51,713	0/0:13,0:13:39.13:0,39,545	0/0:21,0:21:63.20:0,63,864	0/0:19,0:19:57.19:0,57,795	0/0:8,0:8:24.08:0,24,336
chr10	70175801	.	G	GAGA	249.67	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.215;DP=588;FS=18.545;HRun=0;HaplotypeScore=89.5375;InbreedingCoeff=0.9813;MQ=90.42;MQ0=0;MQRankSum=-4.198;QD=41.61;ReadPosRankSum=1.404;VQSLOD=3.3252;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,154,2800	0/0:7,0:7:21.07:0,21,391	0/0:22,0:22:63.20:0,63,1079	0/0:24,0:24:65.67:0,66,1095	0/0:15,0:15:45.15:0,45,830	0/0:20,0:20:60.21:0,60,1117	0/0:22,0:22:63.22:0,63,1175	0/0:27,0:27:81.28:0,81,1506	0/0:21,0:21:60.15:0,60,1054	0/0:22,0:22:63.21:0,63,1141	0/0:7,0:7:21.07:0,21,385	0/0:29,0:29:87.30:0,87,1622	0/0:21,0:21:63.22:0,63,1158	0/0:25,0:25:75.26:0,75,1398	0/0:17,0:17:51.17:0,51,951	0/0:23,0:23:66.23:0,66,1231	0/0:36,0:36:99:0,108,1988	1/1:0,6:6:18.06:340,18,0	0/0:24,0:24:69.18:0,69,1184	0/0:13,0:13:39.12:0,39,696	0/0:49,0:49:99:0,144,2677	0/0:13,0:13:39.13:0,39,727	0/0:11,0:11:30.10:0,30,556	0/0:18,0:18:54.14:0,54,971	0/0:13,0:13:39.13:0,39,727	0/0:21,0:21:63.22:0,63,1169	0/0:20,0:20:57.20:0,57,1062	0/0:8,0:8:24.08:0,24,448
chr10	70178153	.	A	ATGTTACAC	5653.60	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.492;DP=686;FS=15.637;HRun=0;HaplotypeScore=165.2633;InbreedingCoeff=0.9914;MQ=82.15;MQ0=0;MQRankSum=-9.014;QD=102.79;ReadPosRankSum=-4.210;VQSLOD=3.2661;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,3577	0/0:11,0:11:33.11:0,33,918	0/0:26,0:26:66.21:0,66,1515	0/0:20,0:21:48.08:0,48,1234	0/0:36,0:36:99:0,108,2823	0/0:26,0:26:78.24:0,78,2035	0/0:24,0:24:57.17:0,57,1494	1/1:23,17:46:99:4905,132,0	0/0:32,0:32:90.30:0,90,2486	0/0:22,0:22:60.21:0,60,1683	0/0:13,0:13:33.11:0,33,934	0/0:26,0:26:78.25:0,78,2146	0/0:19,0:19:51.18:0,51,1426	0/0:20,0:20:60.21:0,60,1682	0/0:25,0:25:66.20:0,66,1740	0/0:29,0:29:84.26:0,84,2165	0/0:25,0:25:75.26:0,75,2069	1/1:1,6:9:18.06:749,18,0	0/0:24,0:24:66.19:0,66,1635	0/0:26,0:26:72.20:0,72,1810	0/0:26,0:26:78.22:0,78,2001	0/0:22,0:22:66.23:0,66,1848	0/0:16,0:16:48.16:0,48,1358	0/0:26,0:26:78.22:0,78,2142	0/0:26,0:26:75.26:0,75,2112	0/0:27,0:27:72.23:0,72,1977	0/0:29,0:29:84.24:0,84,2155	0/0:6,0:6:18.05:0,18,451
chr10	70181338	.	A	AGTGT	512.86	PASS	AC=18;AF=0.474;AN=38;BaseQRankSum=1.452;DP=586;FS=9.037;HRun=0;HaplotypeScore=109.5604;InbreedingCoeff=0.4774;MQ=64.61;MQ0=15;MQRankSum=-0.207;QD=2.45;ReadPosRankSum=-1.161;VQSLOD=1.4382;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:6.49:81,6,0	./.	./.	./.	1/1:17,0:17:3.01:39,3,0	0/0:19,0:18:2.59:0,3,45	0/0:22,0:23:6.01:0,6,73	./.	0/0:19,0:18:6.02:0,6,91	1/1:22,0:21:0.94:2,1,0	./.	0/0:19,0:17:3.01:0,3,45	./.	0/0:21,0:20:3:0,3,45	0/0:20,0:20:6.39:0,6,68	0/0:17,0:18:5.38:0,5,72	1/1:30,0:29:12.04:221,12,0	1/1:12,0:12:3.01:45,3,0	1/1:15,0:14:0.47:1,0,0	0/0:14,0:15:3:0,3,28	./.	./.	1/1:14,0:14:9.01:106,9,0	1/1:24,15:44:6.02:139,6,0	0/0:18,0:17:5.66:0,6,88	1/1:23,0:23:1.83:3,2,0	0/0:12,0:12:3:0,3,27	./.
chr10	70183524	.	CTGTGTG	C	182.66	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=4.275;DP=658;FS=1.972;HRun=0;HaplotypeScore=122.4975;InbreedingCoeff=0.6908;MQ=58.73;MQ0=17;MQRankSum=-1.980;QD=1.92;ReadPosRankSum=1.025;VQSLOD=2.3229;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:0.47:1,0,0	0/0:12,0:12:15.05:0,15,326	./.	0/0:27,0:13:0.47:0,0,1	1/1:20,6:26:6.49:121,6,0	0/0:22,0:24:27.08:0,27,631	0/0:24,0:24:9.03:0,9,236	0/0:25,0:25:18.86:0,19,246	0/0:20,0:20:33.08:0,33,647	0/0:20,0:20:15.05:0,15,384	0/0:23,0:25:17.14:0,17,414	0/0:18,0:18:21.53:0,22,465	0/0:25,0:25:24.06:0,24,491	0/0:24,0:24:30.05:0,30,480	0/0:32,0:34:33.06:0,33,633	0/0:20,0:21:24.07:0,24,564	0/0:18,0:18:0:0,0,0	0/0:7,0:11:9.03:0,9,253	0/0:12,0:12:9.03:0,9,226	0/0:24,0:24:24.07:0,24,609	0/0:38,0:38:58.02:0,58,1477	0/0:15,0:15:12.04:0,12,249	./.	1/1:25,4:30:9.03:162,9,0	1/1:10,0:14:1.77:4,2,0	0/0:45,0:45:60.48:0,60,1477	0/0:25,0:32:21.51:0,22,396	0/0:11,0:10:9.03:0,9,256
chr10	70184629	.	TAC	T	5603.47	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=16.426;DP=789;FS=0.317;HRun=0;HaplotypeScore=117.0744;InbreedingCoeff=0.9520;MQ=64.40;MQ0=5;MQRankSum=-6.174;QD=17.19;ReadPosRankSum=4.477;VQSLOD=4.5635;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:20:19.84:96,20,0	1/1:15,0:15:39.90:201,40,0	0/0:40,0:26:49.57:0,50,724	0/0:31,0:22:53.11:0,53,694	1/1:9,0:39:59.61:294,60,0	0/0:36,0:36:93.03:0,93,1447	0/0:28,0:28:75.26:0,75,1217	0/0:42,0:42:96.30:0,96,1490	0/0:27,0:27:78.23:0,78,1212	0/0:47,1:49:83.47:0,83,1840	0/0:34,0:34:81.28:0,81,1305	0/0:18,0:18:45.15:0,45,725	0/0:24,0:24:57.16:0,57,861	0/0:21,0:21:20.91:0,21,826	0/0:33,1:34:44.34:0,44,1179	0/0:25,1:26:32.30:0,32,1028	1/1:6,0:20:8.52:42,9,0	1/1:4,13:15:0.81:334,1,0	1/1:2,9:11:26.66:293,27,0	1/1:7,34:43:84.09:1011,84,0	1/1:6,28:34:69.22:849,69,0	0/0:23,0:23:51.16:0,51,807	1/1:7,0:30:51.96:254,52,0	1/1:4,0:21:11.36:56,11,0	0/0:30,0:30:84.27:0,84,1323	1/1:6,21:26:63.14:733,63,0	1/1:5,29:34:78.25:960,78,0	1/1:1,13:14:39.12:480,39,0
chr10	70184632	.	AC	A	139.66	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=13.042;DP=785;FS=2.300;HRun=1;HaplotypeScore=122.6198;InbreedingCoeff=0.3322;MQ=65.68;MQ0=5;MQRankSum=-11.888;QD=1.33;ReadPosRankSum=2.696;VQSLOD=-0.7422;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:2.33:2,0,64	1/1:1,14:15:40.71:231,41,0	0/0:41,0:28:78.09:0,78,1098	0/0:35,0:25:68.95:0,69,936	0/1:40,0:39:6.04:6,0,249	0/0:36,0:36:99:0,101,1544	0/0:29,0:29:87.28:0,87,1339	0/0:40,0:40:99:0,120,1801	0/0:26,0:26:78.27:0,78,1247	0/0:45,0:45:99:0,133,2042	0/0:31,0:31:93.29:0,93,1420	0/0:18,0:18:54.18:0,54,843	0/0:24,0:24:72.20:0,72,1071	0/0:19,0:19:55.43:0,55,866	0/0:33,0:33:97.21:0,97,1487	0/0:27,0:27:79.14:0,79,1196	0/0:21,0:21:4.71:0,5,105	0/0:17,0:15:15.81:0,16,109	0/0:11,0:11:17.89:0,18,120	0/0:43,0:43:44:0,44,294	0/0:33,0:33:35.36:0,35,203	0/0:23,0:23:63.21:0,63,977	0/1:30,0:30:7.18:7,0,140	0/0:21,0:21:0.16:0,0,59	0/0:30,0:30:90.31:0,90,1419	0/0:27,0:26:40.01:0,40,265	0/0:35,0:34:34.31:0,34,190	0/0:14,0:14:14.53:0,15,64
chr10	70184634	.	ACAC	A	971.33	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=13.155;DP=782;FS=0.959;HRun=0;HaplotypeScore=146.4878;InbreedingCoeff=0.2003;MQ=66.41;MQ0=5;MQRankSum=-12.173;QD=6.89;ReadPosRankSum=1.865;VQSLOD=3.1861;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:11.97:92,0,12	1/1:1,14:15:45.04:439,45,0	0/0:43,0:28:81.73:0,82,1629	0/0:39,0:29:76.74:0,77,1472	0/1:38,0:37:99:261,0,136	0/0:35,0:35:99:0,99,2303	0/0:30,0:30:90.31:0,90,2059	0/0:39,0:39:99:0,117,2586	0/0:26,0:26:78.27:0,78,1898	0/0:46,0:46:99:0,138,3121	0/0:30,0:30:90.31:0,90,2125	0/0:18,0:18:54.18:0,54,1245	0/0:23,0:23:69.22:0,69,1523	0/0:19,0:19:56.93:0,57,1334	0/0:35,0:35:99:0,105,2262	0/0:27,0:27:80.94:0,81,1804	0/1:21,0:21:33.96:34,0,61	0/0:16,0:14:32.97:0,33,224	0/0:11,0:11:29.30:0,29,171	0/0:43,0:43:83.65:0,84,568	0/0:32,0:32:73.64:0,74,417	0/0:23,0:23:63.20:0,63,1406	0/1:28,0:28:51.48:232,0,51	0/1:21,0:21:23.54:50,0,24	0/0:30,0:30:90.31:0,90,2143	0/0:28,0:27:75.31:0,75,502	0/0:34,0:33:78.34:0,78,410	0/0:14,0:14:37.83:0,38,182
chr10	70186468	.	TCACACACACACA	T	883.60	PASS	AB=0.886;AC=14;AF=0.292;AN=48;BaseQRankSum=4.464;DP=475;FS=8.006;HRun=0;HaplotypeScore=99.3994;InbreedingCoeff=0.4931;MQ=28.76;MQ0=164;MQRankSum=-4.029;QD=6.18;ReadPosRankSum=2.054;VQSLOD=0.5862;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:24:14.98:0,15,591	1/1:15,0:11:9.03:248,9,0	./.	./.	0/0:9,0:7:3.01:0,3,135	0/0:21,0:15:6.02:0,6,242	0/0:26,0:17:9.81:0,10,211	./.	0/0:16,0:8:6.02:0,6,246	0/0:17,0:12:33.03:0,33,925	0/0:13,0:8:3.01:0,3,149	0/0:17,0:14:9.32:0,9,335	0/0:18,0:14:24.38:0,24,620	0/0:18,0:10:16.47:0,16,733	0/0:15,0:11:5.99:0,6,126	0/0:21,0:13:14.88:0,15,511	./.	1/1:10,0:2:3:29,3,0	0/1:15,0:12:10.14:16,0,10	1/1:11,1:15:0.47:1,0,0	0/1:19,8:14:14.14:67,0,14	0/0:25,0:21:18.06:0,18,682	0/0:16,0:13:11.83:0,12,549	0/0:23,0:7:0.47:0,0,1	0/0:12,0:9:6.02:0,6,184	1/1:10,1:14:10.12:265,10,0	1/1:11,0:12:5.01:102,5,0	1/1:16,4:4:9.03:300,9,0
chr10	70186495	.	CACACACACACACACACAT	C	430.56	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=3.951;DP=530;FS=0.000;HRun=0;HaplotypeScore=192.6027;InbreedingCoeff=0.3248;MQ=32.11;MQ0=117;MQRankSum=-3.672;QD=7.83;ReadPosRankSum=1.218;VQSLOD=2.5313;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:24:18.06:0,18,1088	1/1:8,7:11:9.03:435,9,0	0/0:19,0:2:5.56:0,6,30	0/0:20,0:11:22.73:0,23,526	0/0:14,0:12:3.48:0,3,229	0/0:22,0:19:12.04:0,12,664	0/0:25,0:23:39.69:0,40,1105	0/0:5,0:4:12.01:0,12,108	0/0:16,0:13:17.79:0,18,602	0/0:23,0:22:62.03:0,62,1994	0/0:17,0:15:6.44:0,6,260	0/0:21,0:18:9.50:0,10,617	0/0:21,0:16:32.09:0,32,1320	0/0:16,0:11:15.52:0,16,1187	0/0:17,0:14:6.02:0,6,294	0/0:18,0:11:18.06:0,18,1022	0/0:17,0:4:5.97:0,6,77	0/0:13,0:4:8.99:0,9,186	0/0:8,0:6:6.56:0,7,124	0/0:21,0:20:5.50:0,6,41	0/0:23,0:15:7.76:0,8,50	0/0:31,0:28:24.55:0,25,1616	0/0:22,0:19:21.54:0,22,1459	0/0:19,0:7:0.94:0,1,2	0/0:15,0:12:14.91:0,15,503	0/1:20,0:18:50.37:50,0,532	0/0:20,0:14:13.64:0,14,164	0/1:20,0:5:3.08:52,0,3
chr10	70187698	.	GCCCAGTCCAACATC	G	7965.59	PASS	AB=0.514;AC=11;AF=0.196;AN=56;BaseQRankSum=12.869;DP=634;FS=9.567;HRun=0;HaplotypeScore=244.3734;InbreedingCoeff=0.8821;MQ=84.50;MQ0=0;MQRankSum=-11.380;QD=75.86;ReadPosRankSum=0.341;VQSLOD=3.2249;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,9120	0/0:10,0:10:30.10:0,30,2115	0/0:25,0:25:72.19:0,72,3904	0/0:16,0:16:48.16:0,48,2813	0/0:23,0:23:69.24:0,69,4347	0/0:21,0:21:63.22:0,63,4115	0/0:28,0:28:84.26:0,84,5182	0/0:26,0:26:75.25:0,75,4921	0/0:29,0:29:87.30:0,87,6204	0/0:12,0:12:36.12:0,36,2380	0/0:16,0:16:48.14:0,48,3031	0/0:24,0:24:69.24:0,69,4587	0/0:33,0:33:99:0,99,6768	0/0:31,0:31:93.32:0,93,6435	0/0:33,0:33:99:0,99,6914	0/0:21,0:21:63.22:0,63,4415	0/0:34,0:34:99:0,102,6705	0/0:26,0:26:78.25:0,78,5083	1/1:0,9:9:27.08:1085,27,0	1/1:0,24:24:33.11:1347,33,0	1/1:0,23:23:24.08:1033,24,0	0/0:18,0:18:54.19:0,54,3568	0/0:20,0:20:60.21:0,60,4107	0/0:29,0:29:87.28:0,87,5716	0/0:9,0:9:27.09:0,27,1698	0/1:1,18:19:99:2137,0,160	1/1:0,25:25:39.13:1700,39,0	1/1:0,5:5:15.05:663,15,0
chr10	70187913	.	AT	A	72.68	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.664;DP=696;FS=3.281;HRun=6;HaplotypeScore=68.6107;InbreedingCoeff=0.9834;MQ=85.02;MQ0=0;MQRankSum=-0.151;QD=10.38;ReadPosRankSum=-1.804;VQSLOD=1.1784;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1405	1/1:0,7:7:15.04:161,15,0	0/0:25,0:25:42.40:0,42,558	0/0:20,0:19:34.26:0,34,478	0/0:22,0:22:66.19:0,66,841	0/0:12,0:12:33.11:0,33,434	0/0:28,0:28:75.23:0,75,973	0/0:38,0:38:99:0,105,1358	0/0:23,0:23:63.18:0,63,798	0/0:23,0:23:63.20:0,63,817	0/0:24,0:24:63.16:0,63,810	0/0:17,0:17:45.15:0,45,586	0/0:20,0:20:54.18:0,54,711	0/0:24,0:24:69.22:0,69,908	0/0:35,0:35:99:0,99,1273	0/0:24,0:24:69.22:0,69,907	0/0:39,0:39:99:0,111,1461	0/0:42,0:42:99:0,117,1536	0/0:24,0:24:66.16:0,66,793	0/0:28,0:28:84.27:0,84,1097	0/0:36,0:36:99:0,99,1302	0/0:20,0:20:57.18:0,57,746	0/0:21,0:21:54.65:0,55,710	0/0:20,0:20:54.18:0,54,711	0/0:15,0:15:42.14:0,42,553	0/0:26,0:26:78.23:0,78,997	0/0:33,0:32:90.28:0,90,1168	0/0:14,0:14:42.14:0,42,553
chr10	70191458	.	GGTGTGTGTGTGT	G	136.64	PASS	AB=0.898;AC=6;AF=0.115;AN=52;BaseQRankSum=2.495;DP=538;FS=0.000;HRun=0;HaplotypeScore=169.1340;InbreedingCoeff=0.4465;MQ=71.19;MQ0=14;MQRankSum=0.781;QD=1.44;ReadPosRankSum=-1.021;VQSLOD=2.2056;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,3:25:0:0,0,0	0/0:7,0:7:6.02:0,6,313	./.	./.	1/1:18,1:20:5.05:69,5,0	0/0:16,0:16:12.04:0,12,379	0/0:30,0:30:21.07:0,21,686	0/0:24,0:24:9.09:0,9,106	0/0:20,0:20:21.05:0,21,679	0/0:14,0:14:12.51:0,13,326	0/0:11,0:11:15.03:0,15,356	0/0:17,0:18:15.51:0,16,427	0/0:20,0:20:15.05:0,15,568	0/0:10,0:10:9.01:0,9,122	0/0:20,0:20:9.03:0,9,293	0/0:11,0:11:9.03:0,9,293	0/0:18,0:17:16.28:0,16,248	0/0:18,0:20:18.06:0,18,637	0/0:23,0:20:12.51:0,13,598	0/0:11,0:11:3.95:0,4,153	0/0:31,0:31:30.04:0,30,947	0/0:17,0:19:24.07:0,24,808	0/1:16,2:18:51.77:129,0,52	1/1:29,0:28:3:44,3,0	0/0:11,0:11:18.06:0,18,494	0/0:18,0:18:12.03:0,12,372	0/0:17,0:16:17.89:0,18,643	0/0:11,0:10:15.05:0,15,577
chr10	70193575	.	CTT	C	1912.62	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=0.133;DP=519;FS=0.000;HRun=13;HaplotypeScore=80.9454;InbreedingCoeff=0.7899;MQ=70.88;MQ0=7;MQRankSum=1.163;QD=12.42;ReadPosRankSum=4.208;VQSLOD=2.4528;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,25:32:30.91:443,31,0	1/1:3,2:16:36.41:198,36,0	0/0:15,0:12:17.96:0,18,197	0/1:14,0:10:9.42:22,0,9	1/1:2,14:15:40.50:396,40,0	0/0:15,0:15:30.59:0,31,326	0/0:21,0:21:59.60:0,60,785	0/0:30,1:31:47.92:0,48,816	0/0:14,0:17:38.36:0,38,460	0/1:13,0:12:5.22:5,0,227	0/0:16,0:16:28.55:0,29,335	0/0:15,0:17:35.46:0,35,382	0/0:13,0:15:35.06:0,35,428	0/0:12,0:15:26.54:0,27,356	0/0:11,0:11:17.97:0,18,208	0/0:17,0:18:30.05:0,30,388	1/1:7,23:30:25.95:437,26,0	0/0:23,0:24:59.40:0,59,699	0/0:18,0:24:3.71:0,4,172	0/0:9,0:18:31.53:0,32,173	0/0:3,0:10:4.99:0,5,17	0/0:14,0:15:30.02:0,30,359	1/1:1,10:11:26.94:261,27,0	1/1:2,18:21:29.36:339,29,0	0/0:19,0:20:44.55:0,45,488	0/0:4,0:22:47.12:0,47,208	0/0:7,0:19:25.22:0,25,112	0/0:5,0:18:20.46:0,20,84
chr10	70194046	.	T	TA	2806.30	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=3.118;DP=548;FS=9.047;HRun=8;HaplotypeScore=68.7988;InbreedingCoeff=0.9151;MQ=78.12;MQ0=0;MQRankSum=-2.014;QD=24.19;ReadPosRankSum=3.293;VQSLOD=4.2578;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:54.16:623,54,0	0/0:11,0:11:30.02:0,30,274	0/0:17,0:16:35.97:0,36,315	0/1:11,0:11:4.16:4,0,205	1/1:2,27:29:75.22:866,75,0	0/0:26,0:26:69.02:0,69,631	0/0:26,0:26:72:0,72,651	0/0:30,0:30:74.99:0,75,674	0/0:18,0:18:48.02:0,48,439	0/0:21,0:21:48:0,48,436	0/0:33,0:33:77.99:0,78,703	0/0:15,0:15:42.02:0,42,384	0/0:16,0:16:23.45:0,23,387	0/0:13,0:13:35.61:0,36,329	0/0:24,0:24:66.02:0,66,600	0/0:17,0:17:39.01:0,39,357	1/1:6,26:32:78.23:900,78,0	0/0:22,0:22:63.03:0,63,577	0/0:13,0:13:36.01:0,36,330	0/0:18,0:18:48.02:0,48,439	0/0:11,0:11:30.02:0,30,275	0/0:19,0:19:54.03:0,54,494	1/1:2,11:13:27.55:313,28,0	1/1:1,8:9:24.07:277,24,0	0/0:19,0:19:48.02:0,48,438	0/0:27,0:27:72.01:0,72,651	0/0:20,0:20:57.03:0,57,522	0/0:16,0:16:42.02:0,42,384
chr10	70195100	.	T	TTGC	3825.75	PASS	AB=0.881;AC=24;AF=0.444;AN=54;BaseQRankSum=-1.428;DP=567;FS=1.048;HRun=0;HaplotypeScore=113.0654;InbreedingCoeff=0.8110;MQ=66.60;MQ0=0;MQRankSum=-2.499;QD=14.49;ReadPosRankSum=-3.130;VQSLOD=3.0690;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,11:29:24.08:473,24,0	0/1:11,2:16:6.21:33,0,6	0/0:19,0:18:11.98:0,12,113	0/0:12,0:11:8.99:0,9,102	1/1:13,3:17:9.03:173,9,0	0/0:27,0:27:30.10:0,30,414	0/0:25,0:25:57.19:0,57,785	1/1:16,0:16:14.81:125,15,0	0/0:21,0:21:42.14:0,42,580	0/0:10,0:10:9.03:0,9,123	0/0:15,0:15:15.05:0,15,207	0/0:24,0:24:48.15:0,48,647	0/0:31,0:31:57.19:0,57,782	0/0:18,0:18:48.15:0,48,647	0/0:29,0:29:51.17:0,51,705	0/0:29,0:29:48.16:0,48,662	1/1:7,13:21:9.20:785,9,0	1/1:26,0:26:14.98:324,15,0	1/1:16,0:16:13.98:113,14,0	./.	0/1:18,0:18:0:1,0,0	0/0:19,0:19:21.07:0,21,289	1/1:14,3:18:12.04:232,12,0	1/1:7,25:33:60.21:1187,60,0	0/0:19,0:19:6.02:0,6,82	1/1:15,0:14:1.41:3,1,0	1/1:35,0:35:30:317,30,0	1/1:3,0:3:8.78:59,9,0
chr10	70196457	.	GC	G	12556.11	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=12.746;DP=604;FS=5.037;HRun=1;HaplotypeScore=57.7903;InbreedingCoeff=0.9999;MQ=79.56;MQ0=0;MQRankSum=-3.355;QD=38.52;ReadPosRankSum=4.186;VQSLOD=5.3866;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:42:99:1635,117,0	1/1:0,14:14:36.12:503,36,0	0/0:21,0:21:60.20:0,60,959	0/0:17,0:17:44.29:0,44,707	1/1:0,27:27:78.10:1020,78,0	0/0:21,0:21:63.12:0,63,927	0/0:27,0:27:81.24:0,81,1244	1/1:0,26:26:78.23:1053,78,0	0/0:17,0:17:51.13:0,51,745	0/0:25,0:25:75.26:0,75,1199	0/0:18,0:18:51.16:0,51,779	0/0:14,0:14:42.12:0,42,646	0/0:18,0:18:54.11:0,54,763	0/0:17,0:17:51.16:0,51,787	0/0:23,0:23:69.19:0,69,1031	0/0:16,0:16:48.15:0,48,740	1/1:0,27:27:75.25:1048,75,0	1/1:0,21:21:63.21:880,63,0	1/1:5,13:18:51.12:647,51,0	1/1:0,29:29:78.26:1089,78,0	1/1:0,27:27:81.27:1132,81,0	0/0:20,0:20:60.17:0,60,929	1/1:0,13:13:39.13:545,39,0	1/1:0,28:28:69.18:941,69,0	0/0:24,0:24:72.25:0,72,1147	1/1:1,19:20:60.18:808,60,0	1/1:0,22:22:60.20:836,60,0	1/1:0,12:12:30.10:419,30,0
chr10	70196618	.	A	AG	554.26	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.941;DP=667;FS=0.837;HRun=6;HaplotypeScore=63.5502;InbreedingCoeff=0.9049;MQ=88.24;MQ0=0;MQRankSum=0.338;QD=24.10;ReadPosRankSum=-4.403;VQSLOD=1.4188;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,132,1315	0/0:13,0:13:39.09:0,39,398	0/0:27,0:27:50.22:0,50,514	0/0:23,0:23:50.81:0,51,463	0/0:28,0:28:71.94:0,72,711	0/0:17,0:17:48.10:0,48,485	0/0:19,0:19:51.09:0,51,513	1/1:4,19:23:57.10:649,57,0	0/0:16,0:16:48.07:0,48,467	0/0:33,0:33:87.12:0,87,856	0/0:31,0:31:84.18:0,84,852	0/0:27,0:27:81.11:0,81,801	0/0:20,0:20:57.13:0,57,581	0/0:13,0:13:33.05:0,33,328	0/0:24,0:24:69.15:0,69,704	0/0:25,0:25:72.10:0,72,702	0/0:48,0:48:99:0,141,1430	0/0:23,0:23:63.05:0,63,615	0/0:17,0:17:47.96:0,48,464	0/0:23,0:23:66.12:0,66,657	0/0:31,0:31:84.10:0,84,823	0/0:23,0:23:60.08:0,60,589	0/0:17,0:17:42.05:0,42,416	0/0:25,0:25:75.11:0,75,738	0/0:24,0:24:69.14:0,69,692	0/0:25,0:25:66.09:0,66,650	0/0:21,0:21:60.13:0,60,611	0/0:2,0:2:6.01:0,6,61
chr10	70198662	.	C	CA	5986.99	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-7.743;DP=779;FS=0.706;HRun=2;HaplotypeScore=74.4124;InbreedingCoeff=0.9991;MQ=84.71;MQ0=0;MQRankSum=-6.217;QD=41.58;ReadPosRankSum=0.732;VQSLOD=4.6494;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,165,2021	0/0:7,0:7:21.07:0,21,260	0/0:29,0:29:80.26:0,80,938	0/0:21,0:21:47.49:0,47,548	0/0:41,0:41:99:0,123,1511	0/0:21,0:21:54.17:0,54,669	0/0:19,0:19:45.13:0,45,545	0/0:34,0:34:99:0,99,1206	0/0:15,0:15:45.14:0,45,558	0/0:37,0:37:99:0,111,1376	0/0:22,0:22:66.18:0,66,792	0/0:33,0:33:96.25:0,96,1150	0/0:32,0:32:96.30:0,96,1189	0/0:26,0:26:75.24:0,75,930	0/0:35,0:35:99:0,105,1289	0/0:36,0:36:99:0,108,1339	0/0:36,0:36:99:0,102,1249	0/0:32,0:32:93.29:0,93,1152	1/1:1,16:17:48.16:690,48,0	1/1:0,31:31:93.31:1339,93,0	1/1:2,28:30:81.27:1166,81,0	0/0:24,0:24:72.23:0,72,892	0/0:21,0:21:60.19:0,60,744	0/0:28,0:28:78.24:0,78,967	0/0:29,0:28:81.25:0,81,1004	1/1:0,30:30:90.29:1279,90,0	1/1:1,23:24:69.23:994,69,0	1/1:0,12:12:36.12:518,36,0
chr10	70199585	.	T	TA	374.56	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.712;DP=713;FS=1.031;HRun=7;HaplotypeScore=69.6139;InbreedingCoeff=0.9830;MQ=74.27;MQ0=0;MQRankSum=-0.137;QD=16.29;ReadPosRankSum=-4.394;VQSLOD=2.8308;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,159,1535	0/0:6,0:6:18.03:0,18,174	0/0:15,0:15:39.01:0,39,371	0/0:10,0:10:17.70:0,18,165	0/0:21,0:21:60.10:0,60,579	0/0:21,0:21:60.10:0,60,579	0/0:24,0:24:69.07:0,69,658	1/1:9,14:23:42.08:469,42,0	0/0:23,0:23:60.09:0,60,579	0/0:31,0:31:78.11:0,78,748	0/0:26,0:26:78.09:0,78,741	0/0:18,0:18:51.08:0,51,492	0/0:29,0:29:81.13:0,81,782	0/0:23,0:23:59.63:0,60,578	0/0:29,0:29:84.12:0,84,805	0/0:30,0:30:78.11:0,78,748	0/0:21,0:21:63.10:0,63,608	0/0:20,0:20:54:0,54,510	0/0:19,0:19:57.08:0,57,547	0/0:32,0:32:78.08:0,78,741	0/0:33,0:33:93.13:0,93,891	0/0:37,0:37:99:0,102,980	0/0:30,0:30:78.12:0,78,753	0/0:28,0:28:78.12:0,78,751	0/0:37,0:37:99:0,108,1023	0/0:26,0:26:75.11:0,75,720	0/0:32,0:32:81.11:0,81,781	0/0:11,0:11:30.04:0,30,290
chr10	70201233	.	T	TTG	2069.63	PASS	AB=0.889;AC=18;AF=0.321;AN=56;BaseQRankSum=-2.854;DP=725;FS=0.474;HRun=0;HaplotypeScore=115.9221;InbreedingCoeff=0.0964;MQ=66.30;MQ0=4;MQRankSum=-1.497;QD=5.55;ReadPosRankSum=-1.481;VQSLOD=2.6252;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:42,2:44:44.26:44,0,343	0/0:10,0:10:18.50:0,18,193	0/0:23,0:17:2.90:0,3,16	0/0:22,0:19:8.94:0,9,84	0/1:22,0:21:34.99:35,0,159	0/1:17,0:17:1.15:1,0,194	0/1:31,1:34:6.85:7,0,588	1/1:22,0:22:13.52:92,14,0	0/0:32,0:33:50.95:0,51,546	0/0:33,0:35:32.61:0,33,460	0/0:17,0:21:32.55:0,33,300	0/0:19,1:21:1.86:0,2,421	0/1:26,2:29:35.43:35,0,462	0/0:21,1:25:3.24:0,3,547	0/0:21,0:24:59.65:0,60,609	0/0:24,0:27:28.23:0,28,389	0/0:22,0:22:40.98:0,41,272	1/1:15,0:32:18:157,18,0	0/1:16,4:20:17.23:139,0,17	0/1:7,6:15:27.30:178,0,27	0/1:21,16:38:99:436,0,132	0/0:18,0:22:22.03:0,22,294	0/1:21,0:21:27.30:27,0,62	0/0:41,0:40:63.42:0,63,410	0/0:22,0:25:38.61:0,39,382	1/1:15,10:26:14.55:437,15,0	0/1:24,9:34:56.63:478,0,57	1/1:9,5:16:1.32:171,1,0
chr10	70202135	.	TTGTG	T	757.55	PASS	AB=0.945;AC=19;AF=0.380;AN=50;BaseQRankSum=5.347;DP=638;FS=3.867;HRun=0;HaplotypeScore=110.5710;InbreedingCoeff=0.4031;MQ=56.75;MQ0=10;MQRankSum=-0.509;QD=3.07;ReadPosRankSum=0.414;VQSLOD=2.1490;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,2:34:15.49:175,15,0	1/1:4,0:4:5.79:37,6,0	./.	./.	0/0:17,1:21:2.74:0,3,12	0/0:14,0:13:17.78:0,18,296	0/0:43,0:43:28.85:0,29,441	0/0:27,0:27:2.97:0,3,20	0/1:29,1:30:10.21:10,0,473	0/0:22,0:22:23.79:0,24,352	0/0:15,0:17:5.83:0,6,33	0/0:26,0:25:26.04:0,26,347	0/0:20,0:20:24.47:0,24,412	0/0:26,0:29:37.66:0,38,630	0/0:21,0:23:23.76:0,24,365	0/1:14,1:15:19.70:20,0,363	1/1:28,2:30:8.91:114,9,0	0/1:18,0:18:9.17:22,0,9	0/0:12,0:11:2.22:0,2,7	1/1:4,2:8:9.02:120,9,0	1/1:35,6:41:6.02:93,6,0	0/1:13,0:13:18.83:19,0,64	0/0:17,0:16:17.69:0,18,244	0/0:39,0:38:6.01:0,6,598	./.	0/1:18,0:23:18.27:76,0,18	1/1:13,4:18:12.03:167,12,0	1/1:10,1:12:5.96:74,6,0
chr10	70203842	.	GA	G	2877.51	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.408;DP=744;FS=15.287;HRun=9;HaplotypeScore=114.5888;InbreedingCoeff=0.9913;MQ=70.14;MQ0=2;MQRankSum=-8.248;QD=19.06;ReadPosRankSum=-0.368;VQSLOD=2.4067;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,23:30:49.65:624,50,0	0/0:11,0:11:27.08:0,27,311	0/0:23,0:19:11.57:0,12,342	0/0:21,0:18:24.18:0,24,338	1/1:6,25:31:72:647,72,0	0/0:19,0:20:53.99:0,54,603	0/0:19,0:19:47.97:0,48,510	0/0:15,0:34:66.31:0,66,349	0/0:27,0:27:72.19:0,72,812	0/0:39,0:39:93.27:0,93,1060	0/0:34,0:35:77.91:0,78,899	0/0:27,0:27:72.18:0,72,801	0/0:30,0:30:66.11:0,66,721	0/0:37,0:39:95.94:0,96,1029	0/0:32,0:32:87.24:0,87,986	0/0:25,0:25:66.19:0,66,753	1/1:8,23:31:71.80:658,72,0	0/0:27,0:27:65.53:0,66,711	0/0:20,0:19:35.97:0,36,395	0/0:27,0:27:72.20:0,72,822	0/0:14,0:14:33.10:0,33,381	0/0:31,0:31:84.81:0,85,974	1/1:8,25:34:75.01:686,75,0	1/1:7,18:25:48.02:438,48,0	0/0:17,0:18:41.96:0,42,464	0/0:29,0:29:81.24:0,81,935	0/0:29,1:31:56.57:0,57,846	0/0:13,0:13:36.11:0,36,415
chr10	70203871	.	CA	C	7016.34	PASS	AB=0.944;AC=29;AF=0.518;AN=56;BaseQRankSum=15.028;DP=775;FS=1.636;HRun=10;HaplotypeScore=102.9898;InbreedingCoeff=0.9315;MQ=59.12;MQ0=5;MQRankSum=-1.812;QD=17.99;ReadPosRankSum=0.415;VQSLOD=4.7992;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,26:31:68.90:585,69,0	1/1:2,9:11:26.99:234,27,0	0/1:16,1:8:10.42:10,0,83	0/0:27,0:14:22.36:0,22,242	1/1:4,26:31:85.96:722,86,0	0/0:14,1:15:16.04:0,16,378	0/0:25,0:27:73.74:0,74,780	1/1:11,22:33:63.38:539,63,0	0/0:30,0:30:66.16:0,66,721	0/0:46,0:46:99:0,120,1293	0/0:27,0:27:69.09:0,69,708	0/0:34,0:34:64.33:0,64,845	0/0:30,0:32:92.89:0,93,971	0/0:35,1:36:79.12:0,79,1085	0/0:30,0:30:75.19:0,75,821	0/0:31,0:32:54.96:0,55,796	1/1:7,29:37:62.47:636,62,0	1/1:4,22:26:38.10:450,38,0	1/1:3,9:11:26.93:225,27,0	1/1:4,29:33:80.89:691,81,0	1/1:1,16:16:41.99:365,42,0	0/0:21,0:25:65.64:0,66,650	1/1:6,23:29:45.93:572,46,0	1/1:8,19:26:32.92:284,33,0	0/0:21,0:24:60.47:0,60,645	1/1:7,30:37:22.59:677,23,0	1/1:4,32:37:92.01:787,92,0	1/1:1,9:11:29.02:240,29,0
chr10	70205833	.	CCTTGTAGAAG	C	1755.24	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.108;DP=508;FS=4.369;HRun=0;HaplotypeScore=158.0121;InbreedingCoeff=0.9847;MQ=98.79;MQ0=1;MQRankSum=-5.011;QD=70.21;ReadPosRankSum=-1.713;VQSLOD=3.3379;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.30:0,93,4458	0/0:8,0:8:21.03:0,21,963	0/0:24,0:23:61.05:0,61,2735	0/0:40,0:36:90.86:0,91,3577	0/0:17,0:17:48.12:0,48,2024	0/0:22,0:22:57.20:0,57,3024	0/0:16,0:16:48.16:0,48,2441	1/1:5,20:25:60.20:1850,60,0	0/0:12,0:12:36.12:0,36,1685	0/0:12,0:12:36.12:0,36,1705	0/0:8,0:8:24.08:0,24,1212	0/0:15,0:15:45.15:0,45,2143	0/0:16,0:16:45.15:0,45,2359	0/0:21,0:21:63.22:0,63,3088	0/0:19,0:19:57.20:0,57,2928	0/0:16,0:16:42.13:0,42,1907	0/0:22,0:21:63.19:0,63,2872	0/0:18,0:18:51.10:0,51,2292	0/0:22,0:22:63.22:0,63,3249	0/0:15,0:15:45.14:0,45,2147	0/0:19,0:19:54.18:0,54,2539	0/0:20,0:20:60.21:0,60,2974	0/0:13,0:13:36.04:0,36,1299	0/0:23,0:23:69.24:0,69,3290	0/0:17,0:17:51.16:0,51,2576	0/0:19,0:18:54.18:0,54,2548	0/0:9,0:9:27.08:0,27,1117	0/0:8,0:8:18.06:0,18,942
chr10	70206068	.	GA	G	146.12	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.255;DP=377;FS=5.658;HRun=7;HaplotypeScore=70.0809;InbreedingCoeff=0.6561;MQ=52.73;MQ0=33;MQRankSum=-4.247;QD=8.60;ReadPosRankSum=-1.264;VQSLOD=0.8885;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:24.92:0,25,285	0/0:6,0:6:15.01:0,15,171	0/0:23,1:5:7.19:0,7,48	0/0:19,0:3:2.21:0,2,7	0/0:18,0:17:36.92:0,37,417	0/0:17,0:16:33.11:0,33,415	0/0:19,0:19:30.06:0,30,349	1/1:8,9:15:19.10:237,19,0	0/0:9,0:8:12.04:0,12,151	0/0:15,0:15:33.08:0,33,399	0/0:15,0:14:27.08:0,27,327	0/0:13,0:12:30.09:0,30,365	0/0:16,0:14:26.07:0,26,278	0/0:11,0:11:24.08:0,24,301	0/0:13,0:13:27.09:0,27,337	0/0:16,0:14:30.56:0,31,365	0/0:11,0:11:26.16:0,26,253	0/0:15,0:13:36.09:0,36,436	0/0:12,0:10:15.67:0,16,169	0/0:5,0:5:6.02:0,6,75	0/0:5,0:5:9.03:0,9,113	0/0:14,0:14:30.97:0,31,362	0/0:11,0:10:15.51:0,16,176	0/0:9,0:8:14.72:0,15,161	0/0:16,0:16:36.08:0,36,436	0/0:11,0:11:18.06:0,18,226	0/0:17,0:17:41.93:0,42,480	0/0:12,0:9:18.06:0,18,226
chr10	70206080	.	C	CAA	1661.32	PASS	AB=0.822;AC=25;AF=0.446;AN=56;BaseQRankSum=8.180;DP=362;FS=0.000;HRun=13;HaplotypeScore=88.3539;InbreedingCoeff=0.5491;MQ=60.76;MQ0=12;MQRankSum=-9.020;QD=9.13;ReadPosRankSum=-4.994;VQSLOD=0.5559;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,4:13:49.45:141,0,49	1/1:3,4:6:12.04:163,12,0	0/1:21,0:11:39.63:40,0,40	0/0:21,0:8:1.24:0,1,71	0/1:9,6:14:25.84:227,0,26	0/0:16,0:16:26.81:0,27,282	0/0:13,0:15:26.68:0,27,223	1/1:13,0:15:19.13:151,19,0	0/0:6,0:6:11.73:0,12,88	0/0:7,0:10:26.22:0,26,193	0/0:11,0:13:26.07:0,26,192	0/0:8,0:11:5.03:0,5,111	0/0:16,0:14:23.72:0,24,197	0/0:9,0:9:14.94:0,15,132	0/0:8,0:10:17.40:0,17,129	0/0:15,0:15:32.62:0,33,265	1/1:5,2:8:14.53:164,15,0	0/1:8,1:10:12.75:56,0,13	1/1:12,1:14:23.65:263,24,0	1/1:6,0:9:23.90:206,24,0	0/1:4,0:4:0:0,0,0	0/0:13,0:14:25.37:0,25,257	1/1:8,3:11:16.16:129,16,0	1/1:5,3:7:9.03:111,9,0	0/0:15,0:17:23.40:0,23,241	1/1:9,0:12:14.34:121,14,0	1/1:14,0:17:1.54:58,2,0	1/1:7,0:7:0.92:25,1,0
chr10	70206103	.	CT	C	1625.86	PASS	AB=0.955;AC=27;AF=0.500;AN=54;BaseQRankSum=10.383;DP=326;FS=4.811;HRun=4;HaplotypeScore=79.2300;InbreedingCoeff=0.8765;MQ=73.11;MQ0=3;MQRankSum=-10.067;QD=10.49;ReadPosRankSum=-0.111;VQSLOD=0.8103;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,6:12:26.02:188,26,0	1/1:5,2:6:14.62:94,15,0	0/0:31,1:13:17.48:0,17,132	0/1:40,1:17:8.95:9,0,159	1/1:8,4:12:29.75:245,30,0	0/0:14,0:14:39.99:0,40,498	0/0:16,0:16:36.07:0,36,462	1/1:5,2:7:14.89:115,15,0	0/0:7,0:7:18.04:0,18,232	0/0:10,0:10:27.08:0,27,351	0/0:12,0:12:27.54:0,28,341	0/0:8,0:8:24.08:0,24,333	0/0:9,0:9:24.05:0,24,279	0/0:7,0:7:21.07:0,21,289	0/0:10,0:10:25.65:0,26,321	0/0:13,0:13:36.10:0,36,483	1/1:3,3:6:11.92:89,12,0	1/1:5,3:7:13.60:87,14,0	1/1:5,9:15:32.11:305,32,0	1/1:5,6:11:28.34:182,28,0	./.	0/0:14,0:14:33.08:0,33,416	1/1:5,2:6:7.91:75,8,0	1/1:2,3:5:6.73:82,7,0	0/0:19,0:19:51.15:0,51,661	1/1:6,6:11:27.38:221,27,0	1/1:4,1:7:14.84:106,15,0	1/1:0,2:2:5.96:45,6,0
chr10	70206115	.	AAAAGAAAG	A	4221.24	PASS	AB=1.000;AC=25;AF=0.463;AN=54;BaseQRankSum=8.362;DP=351;FS=4.578;HRun=0;HaplotypeScore=116.9472;InbreedingCoeff=0.8981;MQ=72.94;MQ0=3;MQRankSum=-10.565;QD=32.72;ReadPosRankSum=-2.972;VQSLOD=4.0629;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:14:35.26:402,35,0	0/1:7,0:6:12.94:103,0,13	0/0:33,0:14:15.05:0,15,403	0/0:43,0:18:38.28:0,38,565	1/1:14,0:13:32.97:427,33,0	0/0:12,0:12:32.97:0,33,994	0/0:17,0:17:45.08:0,45,1546	1/1:9,0:9:16.44:128,16,0	0/0:11,0:11:27.09:0,27,915	0/0:9,0:9:24.06:0,24,741	0/0:14,0:14:36.04:0,36,1198	0/0:10,0:10:27.06:0,27,806	0/0:7,0:7:14.99:0,15,590	0/0:11,0:11:30:0,30,779	0/0:11,0:11:30.07:0,30,1038	0/0:13,0:13:39.13:0,39,1540	1/1:4,1:5:11.99:242,12,0	1/1:9,0:8:16.73:179,17,0	1/1:15,1:16:38.27:657,38,0	1/1:12,0:12:32.98:621,33,0	./.	0/0:12,0:12:36.11:0,36,1250	1/1:9,1:10:24.45:290,24,0	1/1:7,0:7:15.35:153,15,0	0/0:19,0:19:43.06:0,43,1640	1/1:13,0:12:30.87:518,31,0	1/1:9,1:10:24.01:403,24,0	1/1:2,0:2:5.99:99,6,0
chr10	70206116	.	AAAGAAAG	A	4388.34	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=7.839;DP=345;FS=2.880;HRun=0;HaplotypeScore=105.6923;InbreedingCoeff=0.9141;MQ=72.30;MQ0=2;MQRankSum=-10.698;QD=33.76;ReadPosRankSum=-3.724;VQSLOD=4.1394;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,2:14:35.55:395,36,0	1/1:7,0:6:2.36:177,2,0	0/0:33,0:14:7.01:0,7,315	0/0:38,0:17:34.67:0,35,501	1/1:11,4:14:35.84:422,36,0	0/0:12,0:12:32.92:0,33,858	0/0:16,0:16:45.10:0,45,1373	1/1:9,0:9:17.99:200,18,0	0/0:10,0:10:27.08:0,27,804	0/0:9,0:9:24.04:0,24,650	0/0:13,0:13:36.01:0,36,1050	0/0:10,0:10:27.04:0,27,666	0/0:8,0:8:17.98:0,18,572	0/0:11,0:11:29.98:0,30,683	0/0:11,0:11:30.05:0,30,898	0/0:13,0:13:39.13:0,39,1370	1/1:4,1:5:11.99:204,12,0	1/1:9,0:8:21.03:297,21,0	1/1:12,4:16:44.90:637,45,0	1/1:6,6:12:32.98:529,33,0	1/1:1,0:1:3.01:40,3,0	0/0:12,0:12:36.12:0,36,1130	1/1:9,1:10:26.96:349,27,0	1/1:6,1:7:17.91:182,18,0	0/0:19,0:19:43.03:0,43,1463	1/1:7,5:11:32.95:468,33,0	1/1:10,0:10:24.04:403,24,0	1/1:1,1:2:5.99:85,6,0
chr10	70206117	.	AAGAAAG	A	4485.66	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=7.481;DP=348;FS=2.849;HRun=0;HaplotypeScore=99.8733;InbreedingCoeff=0.9385;MQ=72.24;MQ0=2;MQRankSum=-9.805;QD=34.24;ReadPosRankSum=-3.907;VQSLOD=4.1099;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:14:35.18:380,35,0	1/1:6,1:6:15.31:243,15,0	0/0:33,0:14:6.80:0,7,268	0/0:36,0:17:34.05:0,34,407	1/1:14,2:15:38.54:451,39,0	0/0:13,0:13:35.95:0,36,848	0/0:16,0:16:45.10:0,45,1210	1/1:8,0:8:17.89:261,18,0	0/0:10,0:10:27.09:0,27,726	0/0:9,0:9:24.04:0,24,624	0/0:13,0:13:36:0,36,962	0/0:11,0:11:30.04:0,30,668	0/0:8,0:8:21.01:0,21,558	0/0:11,0:11:29.96:0,30,608	0/0:11,0:11:30.01:0,30,792	0/0:13,0:13:39.13:0,39,1221	1/1:5,0:5:11.99:186,12,0	1/1:8,1:8:21.03:338,21,0	1/1:14,1:15:44.01:563,44,0	1/1:13,0:13:36:528,36,0	1/1:2,0:2:3.01:40,3,0	0/0:12,0:12:36.12:0,36,1037	1/1:11,0:11:29.85:381,30,0	1/1:7,0:7:17.74:197,18,0	0/0:19,0:19:43:0,43,1316	1/1:12,0:11:32.82:430,33,0	1/1:6,3:9:24.04:409,24,0	1/1:2,0:2:5.99:79,6,0
chr10	70206118	.	AGAAAG	A	4287.87	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=7.359;DP=343;FS=1.537;HRun=0;HaplotypeScore=92.4149;InbreedingCoeff=0.9374;MQ=71.44;MQ0=2;MQRankSum=-11.005;QD=33.50;ReadPosRankSum=-3.838;VQSLOD=3.7570;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:35.27:373,35,0	1/1:5,2:6:17.81:266,18,0	0/0:29,0:13:5.97:0,6,221	0/0:35,0:16:32.25:0,32,355	1/1:16,0:15:38.79:444,39,0	0/0:13,0:13:35.94:0,36,765	0/0:16,0:16:45.10:0,45,1074	1/1:6,1:7:17.42:242,17,0	0/0:10,0:10:27.09:0,27,642	0/0:9,0:9:27.09:0,27,625	0/0:13,0:13:35.98:0,36,853	0/0:12,0:12:33.01:0,33,608	0/0:7,0:7:21.07:0,21,500	0/0:11,0:11:29.95:0,30,547	0/0:11,0:11:27.49:0,27,690	0/0:13,0:13:39.13:0,39,1073	1/1:3,1:4:11.99:167,12,0	1/1:5,3:7:21.03:307,21,0	1/1:12,2:15:42.50:518,43,0	1/1:12,0:13:36.03:503,36,0	1/1:2,0:2:3.01:40,3,0	0/0:12,0:12:36.12:0,36,919	1/1:11,0:11:29.95:378,30,0	1/1:6,0:7:17.86:200,18,0	0/0:19,0:19:42.97:0,43,1170	1/1:12,0:11:32.91:398,33,0	1/1:9,0:9:24.04:380,24,0	1/1:2,0:2:5.99:72,6,0
chr10	70206204	.	T	TAC	453.13	PASS	AB=0.984;AC=24;AF=0.600;AN=40;BaseQRankSum=1.181;DP=370;FS=0.000;HRun=0;HaplotypeScore=59.6613;InbreedingCoeff=0.2621;MQ=55.95;MQ0=18;MQRankSum=0.620;QD=1.99;ReadPosRankSum=-2.302;VQSLOD=1.0850;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:3.01:43,3,0	./.	./.	./.	1/1:15,0:13:5.79:37,6,0	0/0:12,0:10:5.99:0,6,55	0/0:15,0:15:11.64:0,12,84	1/1:12,0:11:2.96:19,3,0	0/0:10,0:9:3.01:0,3,32	0/1:6,0:6:0:0,0,0	0/0:9,0:9:3:0,3,32	1/1:9,1:9:3.01:44,3,0	0/1:8,0:7:0.11:0,0,0	0/0:9,0:8:0:0,0,0	./.	0/1:9,0:9:24.06:24,0,84	0/1:19,1:20:22.45:97,0,22	./.	./.	1/1:10,1:11:2.60:44,3,0	1/1:20,10:31:3.01:44,3,0	./.	1/1:12,0:12:5.72:68,6,0	1/1:19,11:29:8.96:106,9,0	0/1:10,0:9:0:0,0,0	0/1:20,1:21:0:0,0,0	1/1:10,0:10:3.01:40,3,0	./.
chr10	70206364	.	TCCCACCCCCAC	T	11596.30	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=12.502;DP=405;FS=7.405;HRun=0;HaplotypeScore=141.0956;InbreedingCoeff=0.9761;MQ=76.63;MQ0=0;MQRankSum=-12.024;QD=56.84;ReadPosRankSum=2.163;VQSLOD=3.9895;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,17:28:42.14:1305,42,0	1/1:2,4:6:12.04:403,12,0	0/0:21,0:20:32.85:0,33,1226	0/0:22,0:18:29.90:0,30,866	1/1:3,10:13:30.10:1006,30,0	0/0:10,0:10:24.08:0,24,1328	0/0:13,0:13:27.09:0,27,1370	1/1:10,9:19:27.07:721,27,0	0/0:16,0:16:42.14:0,42,2321	0/0:8,0:8:15.05:0,15,719	0/0:16,0:16:48.16:0,48,2412	0/0:10,0:10:30.10:0,30,1660	0/0:14,0:14:30.10:0,30,1616	0/0:13,0:13:36.12:0,36,1948	0/0:21,0:21:54.19:0,54,2862	0/0:13,0:13:36.12:0,36,1925	1/1:3,10:13:24.08:797,24,0	1/1:4,6:10:12.04:403,12,0	1/1:1,5:6:15.02:424,15,0	1/1:4,11:15:33.11:1013,33,0	1/1:11,6:17:16.41:437,16,0	0/0:9,0:9:24.08:0,24,1256	1/1:3,14:17:42.10:1329,42,0	1/1:6,17:23:33.11:1042,33,0	0/0:14,0:14:39.13:0,39,2088	1/1:3,16:19:42.14:1409,42,0	1/1:2,13:15:30.10:1007,30,0	1/1:0,3:3:9.03:302,9,0
chr10	70207454	.	GCTGCCTTTA	G	13052.58	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=15.492;DP=520;FS=2.823;HRun=0;HaplotypeScore=164.1617;InbreedingCoeff=0.9828;MQ=82.61;MQ0=0;MQRankSum=-13.450;QD=56.50;ReadPosRankSum=-1.090;VQSLOD=4.7179;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:39.13:1207,39,0	1/1:2,13:15:39.13:1210,39,0	0/0:22,0:22:57.13:0,57,2134	0/0:17,0:17:48.16:0,48,2118	1/1:0,11:11:30.10:874,30,0	0/0:14,0:14:42.14:0,42,2008	0/0:17,0:17:51.18:0,51,2494	1/1:10,15:25:42.08:839,42,0	0/0:26,0:26:72.25:0,72,3370	0/0:15,0:15:39.13:0,39,1863	0/0:10,0:10:21.07:0,21,1030	0/0:18,0:18:51.18:0,51,2312	0/0:27,0:27:81.28:0,81,3860	0/0:30,0:30:90.30:0,90,4178	0/0:26,0:26:78.27:0,78,3759	0/0:29,0:29:84.29:0,84,4119	1/1:3,13:16:27.09:837,27,0	1/1:5,11:16:24.08:724,24,0	1/1:6,9:15:27.04:735,27,0	1/1:4,11:15:29.97:711,30,0	1/1:5,16:21:39.09:1115,39,0	0/0:21,0:21:60.21:0,60,2923	1/1:1,11:12:26.35:825,26,0	1/1:1,15:16:16.95:556,17,0	0/0:17,0:17:51.18:0,51,2500	1/1:4,15:19:45.12:1188,45,0	1/1:2,23:25:66.23:2046,66,0	1/1:0,4:4:6.02:186,6,0
chr10	70208865	.	GTCCA	G	1266.55	PASS	AB=0.965;AC=16;AF=0.286;AN=56;BaseQRankSum=11.107;DP=615;FS=4.844;HRun=0;HaplotypeScore=180.6548;InbreedingCoeff=-0.0257;MQ=53.31;MQ0=11;MQRankSum=-6.375;QD=4.52;ReadPosRankSum=-1.378;VQSLOD=2.2543;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:26.31:165,0,26	0/1:20,0:20:61.92:195,0,62	0/0:10,0:9:16.92:0,17,165	0/1:4,0:3:9.86:10,0,13	0/1:4,11:13:0:0,0,0	0/0:17,0:17:33.01:0,33,397	0/0:22,0:21:46.55:0,47,439	0/1:38,0:30:85.63:86,0,228	0/0:27,0:26:44.93:0,45,499	0/0:34,0:34:84.23:0,84,1015	0/0:22,0:21:56.91:0,57,594	0/0:31,0:31:71.86:0,72,723	0/0:23,0:23:41.96:0,42,379	0/0:16,0:16:36.03:0,36,464	0/0:34,0:34:55.15:0,55,818	0/0:23,0:23:54.03:0,54,560	0/1:17,0:17:86.75:87,0,106	0/0:21,0:20:19.92:0,20,467	0/1:18,0:16:40.96:41,0,154	0/1:25,0:24:96.86:97,0,119	1/1:18,0:18:3.10:80,3,0	0/0:18,0:18:41.98:0,42,495	1/1:24,0:23:20.98:127,21,0	0/1:21,0:20:35.35:60,0,35	0/0:37,0:37:99:0,105,1673	0/1:27,0:25:99:239,0,235	0/1:21,0:20:50.13:183,0,50	0/1:10,0:10:40.09:59,0,40
chr10	70208868	.	C	CATCT	2167.79	PASS	AB=0.914;AC=36;AF=0.692;AN=52;BaseQRankSum=1.033;DP=615;FS=0.000;HRun=0;HaplotypeScore=188.1098;InbreedingCoeff=0.0634;MQ=52.71;MQ0=11;MQRankSum=-1.558;QD=4.16;ReadPosRankSum=0.991;VQSLOD=2.4304;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:5.97:0,6,47	1/1:20,0:20:7.87:56,8,0	./.	./.	0/1:15,0:13:0:0,0,0	1/1:8,9:18:9.03:209,9,0	0/1:21,0:20:32.01:68,0,32	0/1:31,0:25:0:0,0,0	0/1:14,15:28:36.59:130,0,37	1/1:36,1:37:37.10:360,37,0	0/1:22,1:22:36.15:41,0,36	0/1:25,7:32:34.61:130,0,35	1/1:15,0:25:3.01:51,3,0	1/1:9,7:16:9.03:209,9,0	0/1:21,14:36:30.57:249,0,31	1/1:17,0:26:6.02:98,6,0	0/1:18,0:18:14.15:14,0,38	1/1:21,0:20:6.95:79,7,0	1/1:16,0:14:2.98:21,3,0	1/1:22,0:21:11.93:90,12,0	1/1:15,0:15:0.94:2,1,0	1/1:11,7:18:9.03:209,9,0	0/1:24,0:23:7.24:7,0,39	0/0:20,0:20:2.03:0,2,6	0/0:36,0:36:54.11:0,54,755	0/1:29,0:27:6.11:103,0,6	1/1:20,0:18:10.33:110,10,0	1/1:9,0:9:6.46:75,6,0
chr10	70210257	.	ATGTGTGTC	A	1330.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.141;DP=994;FS=1.422;HRun=0;HaplotypeScore=243.0801;InbreedingCoeff=0.9814;MQ=57.71;MQ0=10;MQRankSum=4.087;QD=32.46;ReadPosRankSum=-5.453;VQSLOD=2.3828;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,125,4427	0/0:9,0:9:24.08:0,24,956	0/0:30,0:13:21:0,21,347	0/0:45,0:19:48.06:0,48,1051	0/0:34,0:34:89.98:0,90,3514	0/0:23,0:23:60.68:0,61,2130	0/0:26,0:26:66.17:0,66,1971	1/1:9,32:40:96.08:1426,96,0	0/0:35,0:35:84.27:0,84,2993	0/0:41,0:41:99:0,114,3845	0/0:22,0:22:50.80:0,51,1801	0/0:52,0:52:99:0,138,4982	0/0:34,0:34:93.29:0,93,3435	0/0:33,0:33:90.25:0,90,3183	0/0:50,0:50:99:0,141,4821	0/0:34,0:34:90.28:0,90,3428	0/0:45,0:45:99:0,114,4145	0/0:26,0:26:69.21:0,69,2443	0/0:19,0:17:38.95:0,39,1162	0/0:32,0:32:93.29:0,93,3449	0/0:83,0:83:99:0,208,7026	0/0:43,0:43:99:0,111,3582	0/0:27,0:27:78.25:0,78,2729	0/0:48,0:48:99:0,102,3934	0/0:32,0:32:81.22:0,81,2834	0/0:36,0:36:93.31:0,93,3400	0/0:27,0:27:72.25:0,72,2774	0/0:10,0:11:16:0,16,524
chr10	70210832	.	GACAGAGAGAC	G	2604.43	PASS	AB=0.987;AC=24;AF=0.429;AN=56;BaseQRankSum=9.415;DP=536;FS=42.738;HRun=0;HaplotypeScore=168.7578;InbreedingCoeff=0.5847;MQ=67.28;MQ0=20;MQRankSum=-1.432;QD=8.65;ReadPosRankSum=-1.654;VQSLOD=0.7735;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:21:15.02:195,15,0	0/1:12,0:12:36.11:36,0,100	0/0:32,0:21:1.47:0,1,388	0/1:35,0:20:13.96:14,0,293	1/1:15,0:14:21.46:243,21,0	0/0:13,0:13:30.02:0,30,409	0/0:23,0:22:45.07:0,45,639	1/1:5,22:25:68.67:645,69,0	0/0:12,0:12:36.08:0,36,688	0/0:20,0:20:60.08:0,60,1007	0/0:11,0:11:30.04:0,30,383	0/0:26,0:26:67.79:0,68,895	0/0:18,0:17:44.95:0,45,658	0/0:13,0:12:30.04:0,30,412	0/0:15,0:15:42.07:0,42,744	0/0:20,0:19:48.05:0,48,701	1/1:10,0:10:15.02:159,15,0	0/1:32,0:32:3.44:162,0,3	0/1:25,0:24:4.99:313,0,5	1/1:20,0:20:20.87:128,21,0	0/1:18,0:18:0.95:123,0,1	0/0:17,0:16:41.89:0,42,519	1/1:18,0:17:18.52:270,19,0	1/1:12,0:13:12.01:143,12,0	0/0:15,0:15:42.11:0,42,856	0/1:25,0:24:99:169,0,111	1/1:18,0:16:20.68:144,21,0	1/1:9,0:6:5.82:61,6,0
chr10	70210850	.	GAC	G	470.80	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=6.294;DP=478;FS=2.024;HRun=0;HaplotypeScore=103.8064;InbreedingCoeff=0.5817;MQ=49.72;MQ0=23;MQRankSum=-0.889;QD=2.94;ReadPosRankSum=-1.283;VQSLOD=2.3437;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:8.98:74,9,0	0/0:16,0:16:13.93:0,14,119	0/0:12,0:6:7.89:0,8,82	0/0:20,0:9:0.12:0,0,51	1/1:12,0:11:8.99:74,9,0	0/0:13,0:13:20.94:0,21,169	0/0:23,0:22:35.74:0,36,295	1/1:26,0:23:14.15:147,14,0	0/0:17,0:17:13.93:0,14,249	0/0:17,0:17:26.94:0,27,384	0/0:8,0:8:17.95:0,18,143	0/1:21,0:20:64.13:64,0,221	0/1:19,0:18:1.91:2,0,231	0/0:12,5:16:23.96:0,24,196	0/0:15,0:15:8.87:0,9,214	0/0:15,0:14:29.22:0,29,235	1/1:13,0:12:4.78:61,5,0	0/0:33,0:32:31.02:0,31,309	0/1:20,0:19:50.48:50,0,153	0/0:18,0:18:26.34:0,26,170	0/0:18,0:16:14.02:0,14,106	0/0:11,0:10:23.94:0,24,191	1/1:17,0:16:14.98:124,15,0	1/1:11,0:11:5.96:45,6,0	0/0:15,0:15:35.95:0,36,313	0/0:26,0:25:34.59:0,35,425	0/0:15,0:13:9.33:0,9,166	0/0:9,0:4:3.05:0,3,8
chr10	70210852	.	CAGAGAGAGAGAGAGAGAG	C	65.15	PASS	AB=0.933;AC=4;AF=0.087;AN=46;BaseQRankSum=0.737;DP=478;FS=0.000;HRun=0;HaplotypeScore=201.0473;InbreedingCoeff=0.2448;MQ=47.75;MQ0=24;MQRankSum=-1.294;QD=0.86;ReadPosRankSum=1.015;VQSLOD=2.7462;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:5.97:0,6,68	0/0:15,0:16:9:0,9,261	./.	./.	0/1:13,0:12:0.12:0,0,0	./.	0/0:24,0:23:16.44:0,16,296	0/0:23,0:20:15.15:0,15,57	0/0:18,0:18:18.06:0,18,857	0/0:17,0:18:29.30:0,29,1097	0/0:8,0:8:3.01:0,3,120	0/0:21,0:20:27.09:0,27,1345	0/0:19,0:18:9.03:0,9,374	0/0:17,0:16:6.02:0,6,169	0/0:14,0:14:12.04:0,12,541	0/0:16,0:15:18.06:0,18,724	0/0:13,0:12:7.27:0,7,79	0/1:21,12:32:8.53:137,0,9	0/0:19,0:18:8.99:0,9,208	./.	0/0:17,0:15:3.01:0,3,107	./.	0/1:17,0:16:0:0,0,0	0/1:13,0:13:0:0,0,0	0/0:16,0:16:12.04:0,12,739	0/0:26,0:26:32.40:0,32,678	0/0:14,0:13:6.02:0,6,71	0/0:6,0:2:3.01:0,3,80
chr10	70210858	.	G	GAC	1040.17	PASS	AB=0.861;AC=14;AF=0.250;AN=56;BaseQRankSum=7.636;DP=466;FS=21.804;HRun=0;HaplotypeScore=101.4137;InbreedingCoeff=0.7014;MQ=45.40;MQ0=26;MQRankSum=-4.757;QD=8.46;ReadPosRankSum=-1.174;VQSLOD=1.4233;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,7:22:9.46:0,9,76	1/1:1,14:15:11.90:146,12,0	0/0:9,0:4:8.83:0,9,72	0/0:12,0:5:2.68:0,3,12	0/0:15,0:15:8.99:0,9,75	0/0:14,0:14:17.97:0,18,147	0/0:28,0:27:34.90:0,35,396	0/0:21,0:18:33.92:0,34,227	0/0:19,0:19:33.88:0,34,340	0/0:19,0:19:56.72:0,57,496	0/0:6,0:6:14.97:0,15,123	0/0:22,0:21:49.93:0,50,420	0/0:20,0:19:42.73:0,43,331	0/0:16,0:15:20.99:0,21,194	0/0:14,0:13:26.92:0,27,216	0/0:18,0:16:29.86:0,30,265	0/1:8,4:12:36.20:36,0,43	0/0:30,0:29:41.72:0,42,327	0/1:18,0:17:5.17:190,0,5	1/1:18,0:18:22.61:143,23,0	1/1:17,0:15:17.99:161,18,0	0/0:13,0:12:14.97:0,15,122	0/0:14,0:13:5.99:0,6,50	0/0:15,0:15:5.99:0,6,48	0/0:13,0:13:26.96:0,27,225	1/1:26,0:25:38.77:427,39,0	1/1:9,0:7:14.79:99,15,0	1/1:7,0:2:4.69:21,5,0
chr10	70211043	.	TAACAACAACAAC	T	5661.69	PASS	AB=0.621;AC=23;AF=0.411;AN=56;BaseQRankSum=10.896;DP=606;FS=11.201;HRun=0;HaplotypeScore=216.5579;InbreedingCoeff=0.8561;MQ=68.87;MQ0=3;MQRankSum=-11.021;QD=30.44;ReadPosRankSum=2.365;VQSLOD=2.5368;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:21:21:509,21,0	1/1:4,4:8:12.04:416,12,0	0/0:37,0:33:27.09:0,27,1162	0/0:44,0:35:32.21:0,32,1132	1/1:5,0:17:20.70:316,21,0	0/0:21,0:21:42.13:0,42,2277	0/0:32,0:32:63.22:0,63,3483	0/0:30,0:42:72.21:0,72,2128	0/0:32,0:32:66.23:0,66,3541	0/0:16,0:16:39.13:0,39,2221	0/0:10,0:10:21.06:0,21,1064	0/0:30,0:30:72.25:0,72,4074	0/0:28,0:29:54.14:0,54,2515	0/0:19,0:18:42.14:0,42,2294	0/0:26,0:27:57.15:0,57,2671	0/0:24,0:25:63.22:0,63,3569	1/1:12,0:20:21.07:587,21,0	0/0:2,0:18:39.13:0,39,2066	1/1:11,4:15:15.02:441,15,0	1/1:7,9:17:21.07:709,21,0	1/1:12,8:21:0.49:87,0,0	0/0:16,0:17:30.07:0,30,1235	1/1:3,0:6:5.62:166,6,0	1/1:12,0:19:18:438,18,0	0/0:21,0:21:42.12:0,42,2171	0/1:7,11:18:55.52:1056,0,56	1/1:5,6:11:15.05:520,15,0	1/1:9,4:13:12.04:419,12,0
chr10	70211542	.	CCAAGG	C	14589.62	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=17.850;DP=598;FS=3.130;HRun=0;HaplotypeScore=125.8758;InbreedingCoeff=0.9903;MQ=86.79;MQ0=0;MQRankSum=-11.355;QD=58.36;ReadPosRankSum=0.530;VQSLOD=5.6798;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:71.34:1636,71,0	1/1:0,6:6:18.06:413,18,0	0/0:22,0:22:66.23:0,66,2115	0/0:23,0:23:66.23:0,66,2017	1/1:1,19:20:48.64:1102,49,0	0/0:23,0:23:69.22:0,69,2126	0/0:21,0:21:63.18:0,63,1952	1/1:0,26:26:78.27:1765,78,0	0/0:27,0:27:81.28:0,81,2497	0/0:23,0:23:66.23:0,66,2160	0/0:12,0:12:36.11:0,36,1124	0/0:19,0:19:57.20:0,57,1882	0/0:25,0:25:75.26:0,75,2409	0/0:21,0:21:63.21:0,63,1929	0/0:28,0:28:84.29:0,84,2716	0/0:27,0:27:81.28:0,81,2668	1/1:0,28:28:72.25:1653,72,0	0/0:33,0:33:99:0,99,3192	1/1:0,14:14:42.14:945,42,0	1/1:0,23:23:60.21:1377,60,0	1/1:0,12:12:21.07:459,21,0	0/0:22,0:22:66.23:0,66,2109	1/1:0,17:17:39.13:895,39,0	1/1:0,22:22:51.18:1168,51,0	0/0:22,0:22:66.23:0,66,2016	1/1:0,25:25:75.24:1664,75,0	1/1:0,22:22:57.43:1304,57,0	1/1:0,3:3:9.03:207,9,0
chr10	70212677	.	AT	A	3745.57	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=11.599;DP=539;FS=8.321;HRun=7;HaplotypeScore=66.9089;InbreedingCoeff=0.9093;MQ=74.40;MQ0=0;MQRankSum=-1.467;QD=23.26;ReadPosRankSum=2.887;VQSLOD=3.7269;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:82.12:0,82,1006	1/1:2,12:14:33.07:337,33,0	0/0:10,0:10:27.92:0,28,316	0/1:14,0:13:18.65:19,0,220	0/0:23,0:23:57.18:0,57,717	0/0:21,0:21:60.18:0,60,743	0/0:14,0:14:42.09:0,42,499	0/0:37,0:37:93.24:0,93,1148	0/0:17,0:17:42.13:0,42,528	0/0:22,0:22:66.21:0,66,830	0/0:22,0:22:60.19:0,60,752	0/0:15,0:15:39.12:0,39,491	0/0:26,0:26:75.23:0,75,931	0/0:12,0:12:33.11:0,33,415	0/0:11,0:11:27.09:0,27,339	0/0:14,0:13:33.11:0,33,415	0/0:12,0:12:30.08:0,30,360	0/0:16,0:16:48.14:0,48,589	1/1:7,14:21:36.08:367,36,0	1/1:2,28:30:78.17:796,78,0	1/1:3,11:14:33.07:337,33,0	0/0:16,0:16:42.13:0,42,529	0/0:23,0:23:63.19:0,63,781	0/0:12,0:12:27.09:0,27,340	0/0:23,0:23:66.20:0,66,809	1/1:2,25:27:40.43:727,40,0	1/1:1,28:29:81.18:826,81,0	1/1:0,12:12:33.08:337,33,0
chr10	70213105	.	GCACCTACGTGCATGTA	G	202.26	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.827;DP=1051;FS=0.000;HRun=0;HaplotypeScore=444.8257;InbreedingCoeff=0.8716;MQ=68.93;MQ0=2;MQRankSum=-1.630;QD=11.90;ReadPosRankSum=-0.787;VQSLOD=0.6350;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:65:99:0,184,11575	0/0:17,0:17:36.12:0,36,2080	0/0:27,0:23:47.16:0,47,1940	0/0:40,0:31:58.48:0,58,2252	0/0:30,0:30:84.29:0,84,5418	0/0:20,0:20:60.19:0,60,3923	0/0:46,0:46:99:0,138,8060	0/0:31,0:31:90.31:0,90,3722	0/0:63,0:63:99:0,190,12366	0/0:56,0:56:99:0,169,11124	0/0:22,0:22:63.22:0,63,4236	0/0:36,0:36:99:0,105,6165	0/0:44,0:44:99:0,129,8515	0/0:54,0:54:99:0,160,10118	0/0:58,0:58:99:0,169,11387	0/0:55,0:55:99:0,163,10660	0/0:23,0:23:66.23:0,66,4336	1/1:3,14:17:5.48:282,5,0	0/0:18,0:18:48.16:0,48,2681	0/0:30,0:30:87.30:0,87,5844	0/0:82,0:82:99:0,232,12852	0/0:33,0:33:99:0,99,6379	0/0:23,0:23:66.23:0,66,3872	0/0:38,0:38:99:0,114,7124	0/0:30,0:30:90.31:0,90,5562	0/0:48,0:48:99:0,141,8941	0/0:30,0:30:90.29:0,90,5608	0/0:14,0:14:42.14:0,42,2734
chr10	70213156	.	C	CTTAGA	786.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.152;DP=869;FS=0.000;HRun=0;HaplotypeScore=165.4571;InbreedingCoeff=0.9048;MQ=87.11;MQ0=0;MQRankSum=-3.957;QD=56.20;ReadPosRankSum=-0.880;VQSLOD=3.8365;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,187,3803	1/1:1,13:14:30.10:881,30,0	0/0:26,0:26:55.89:0,56,1342	0/0:33,0:33:86.36:0,86,1520	0/0:31,0:31:87.25:0,87,1727	0/0:16,0:16:48.16:0,48,1039	0/0:29,0:29:84.23:0,84,1679	0/0:42,0:42:99:0,99,1853	0/0:47,0:47:99:0,129,2492	0/0:40,0:40:99:0,114,2375	0/0:20,0:20:54.15:0,54,1125	0/0:33,0:33:93.31:0,93,1977	0/0:33,0:33:93.28:0,93,1947	0/0:42,0:42:99:0,123,2314	0/0:49,0:49:99:0,129,2537	0/0:40,0:40:99:0,117,2141	0/0:28,0:28:81.22:0,81,1649	0/0:13,0:13:6.02:0,6,130	0/0:23,0:23:60.18:0,60,1284	0/0:31,0:31:84.19:0,84,1668	0/0:41,0:41:99:0,117,2262	0/0:27,0:27:81.27:0,81,1717	0/0:23,0:23:66.23:0,66,1426	0/0:30,0:29:84.24:0,84,1711	0/0:22,0:22:66.21:0,66,1392	0/0:35,0:35:96.32:0,96,2027	0/0:24,0:24:72.25:0,72,1559	0/0:14,0:14:36.09:0,36,699
chr10	70215225	.	GT	G	20102.09	PASS	AB=0.840;AC=54;AF=0.964;AN=56;BaseQRankSum=0.786;DP=580;FS=0.000;HRun=1;HaplotypeScore=275.8447;InbreedingCoeff=-0.0379;MQ=43.02;MQ0=0;MQRankSum=-3.427;QD=34.66;ReadPosRankSum=2.786;VQSLOD=3.9342;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:78.24:980,78,0	1/1:0,8:8:21.07:272,21,0	0/1:4,1:5:16.54:57,0,17	0/1:9,2:11:37.93:198,0,38	1/1:4,19:23:54.11:654,54,0	1/1:0,16:16:48.15:617,48,0	1/1:0,27:27:81.26:1040,81,0	1/1:0,37:37:99:1398,108,0	1/1:0,23:23:69.22:893,69,0	1/1:4,19:23:63.15:793,63,0	1/1:1,12:13:30.09:369,30,0	1/1:0,22:22:66.21:853,66,0	1/1:1,21:22:66.21:848,66,0	1/1:1,24:25:72.23:932,72,0	1/1:3,33:36:99:1378,108,0	1/1:2,20:22:66.20:840,66,0	1/1:2,19:21:54.18:698,54,0	1/1:2,12:14:36.12:467,36,0	1/1:2,20:22:63.20:816,63,0	1/1:1,20:21:57.18:723,57,0	1/1:2,21:23:45.07:508,45,0	1/1:2,23:25:69.22:880,69,0	1/1:0,19:19:48.15:611,48,0	1/1:1,15:16:33.11:423,33,0	1/1:1,13:14:39.13:505,39,0	1/1:2,26:28:84.26:1072,84,0	1/1:3,27:30:87.28:1122,87,0	1/1:0,4:4:12.04:155,12,0
chr10	70215233	.	CA	C	7068.92	PASS	AB=0.986;AC=46;AF=0.821;AN=56;BaseQRankSum=11.250;DP=566;FS=0.481;HRun=1;HaplotypeScore=331.6013;InbreedingCoeff=0.0044;MQ=42.84;MQ0=0;MQRankSum=-2.986;QD=12.58;ReadPosRankSum=9.068;VQSLOD=3.2604;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,1:31:0.53:268,0,1	1/1:8,0:8:23.56:145,24,0	0/0:4,0:4:6.72:0,7,81	0/1:11,1:12:40.80:41,0,69	1/1:17,3:20:43.72:313,44,0	0/1:16,0:16:18.20:158,0,18	1/1:28,1:29:26.42:371,26,0	1/1:38,0:38:0.51:356,1,0	1/1:25,0:25:54.92:424,55,0	1/1:22,0:22:63.89:370,64,0	1/1:11,0:11:1.75:88,2,0	1/1:23,1:24:22.92:367,23,0	1/1:21,0:21:27.66:332,28,0	1/1:25,0:25:37.87:405,38,0	1/1:34,0:34:16.40:461,16,0	1/1:18,0:18:5.54:233,6,0	0/1:21,0:21:40.79:156,0,41	0/1:12,0:12:36.16:94,0,36	1/1:18,0:18:13.85:200,14,0	1/1:21,0:21:31.99:263,32,0	0/1:22,0:22:1.01:98,0,1	0/1:23,0:23:7.77:274,0,8	1/1:17,0:17:44.23:282,44,0	0/1:15,0:15:0.34:128,0,0	1/1:13,0:13:22.62:201,23,0	1/1:29,0:29:42.77:392,43,0	1/1:33,0:33:93.75:582,94,0	1/1:4,0:4:11.67:67,12,0
chr10	70216675	.	C	CA	12034.20	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=17.529;DP=718;FS=10.072;HRun=1;HaplotypeScore=92.3334;InbreedingCoeff=1.0000;MQ=82.26;MQ0=0;MQRankSum=-0.361;QD=37.96;ReadPosRankSum=2.673;VQSLOD=4.8031;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,40:41:99:1535,108,0	1/1:0,15:15:36.12:520,36,0	0/0:20,0:20:54.17:0,54,687	0/0:23,0:23:57.10:0,57,693	1/1:0,36:36:99:1383,102,0	0/0:24,0:24:69.22:0,69,895	0/0:14,0:14:42.14:0,42,543	0/0:25,0:25:75.24:0,75,960	0/0:24,0:24:69.22:0,69,895	0/0:30,0:30:87.26:0,87,1089	0/0:31,0:31:90.26:0,90,1134	0/0:39,0:39:99:0,108,1401	0/0:22,0:22:66.19:0,66,829	0/0:19,0:19:51.17:0,51,661	0/0:38,0:38:99:0,111,1409	0/0:18,0:18:51.17:0,51,660	1/1:1,18:19:51.17:738,51,0	0/0:23,0:23:69.18:0,69,865	1/1:0,20:20:57.12:724,57,0	1/1:2,26:28:72.24:1043,72,0	1/1:0,18:18:48.16:695,48,0	0/0:20,0:20:57.19:0,57,740	1/1:2,31:33:84.01:1218,84,0	1/1:0,21:21:57.19:821,57,0	0/0:31,0:31:93.30:0,93,1206	1/1:0,33:33:99:1409,99,0	1/1:0,38:38:99:1429,99,0	1/1:0,15:15:36.12:520,36,0
chr10	70217604	.	T	TTTTTTTGTTTTTTG	8909.22	PASS	AB=0.931;AC=14;AF=0.250;AN=56;BaseQRankSum=-0.118;DP=661;FS=0.000;HRun=0;HaplotypeScore=246.1469;InbreedingCoeff=0.7009;MQ=77.53;MQ0=1;MQRankSum=-9.670;QD=49.50;ReadPosRankSum=-5.144;VQSLOD=3.4426;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:57.20:0,57,2065	1/1:8,0:11:15.05:250,15,0	0/0:30,0:26:0.41:0,0,149	0/1:28,0:26:18.85:19,0,19	0/0:26,0:26:42.09:0,42,1159	0/0:24,0:24:45.15:0,45,1690	0/0:15,0:15:18.04:0,18,511	0/0:31,0:31:30.09:0,30,666	0/0:15,0:15:21.07:0,21,808	0/0:38,0:38:66.19:0,66,2094	0/0:23,0:23:42.14:0,42,1562	0/0:12,0:12:18.05:0,18,549	0/0:28,0:28:51.17:0,51,1834	0/0:20,0:20:33.11:0,33,1113	0/0:34,0:34:51.16:0,51,1573	0/0:23,0:23:45.15:0,45,1671	0/0:33,0:33:39.13:0,39,1479	0/0:7,0:11:4.53:0,5,137	1/1:15,6:22:31.89:1659,32,0	1/1:26,4:32:36.11:1867,36,0	1/1:6,0:7:6.02:291,6,0	0/0:19,0:19:45.13:0,45,1512	0/0:25,0:25:54.19:0,54,1941	0/0:31,0:31:63.22:0,63,2168	0/0:12,0:12:21.07:0,21,808	0/1:26,2:31:88.33:1032,0,88	1/1:24,11:38:54.17:3417,54,0	1/1:11,0:11:6.02:374,6,0
chr10	70218048	.	CAA	C	4656.47	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.991;DP=595;FS=11.547;HRun=5;HaplotypeScore=72.0381;InbreedingCoeff=0.9989;MQ=85.87;MQ0=1;MQRankSum=-2.987;QD=39.13;ReadPosRankSum=2.285;VQSLOD=3.4481;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.25:0,72,1304	1/1:0,10:9:21.07:294,21,0	0/0:25,0:25:66.01:0,66,1094	0/0:16,0:16:39.10:0,39,627	0/0:23,0:23:66.23:0,66,1194	0/0:27,0:27:78.25:0,78,1393	0/0:20,0:20:60.21:0,60,1092	0/0:31,0:31:84.29:0,84,1539	0/0:26,0:26:75.22:0,75,1334	0/0:22,0:22:62.57:0,63,1082	0/0:16,0:16:45.15:0,45,825	0/0:20,0:20:60.21:0,60,1099	0/0:25,0:25:72.25:0,72,1316	0/0:21,0:21:63.22:0,63,1151	0/0:15,0:15:45.15:0,45,801	0/0:24,0:24:72.25:0,72,1314	0/0:22,0:22:66.18:0,66,1175	0/0:25,0:25:75.22:0,75,1341	1/1:2,17:19:51.17:711,51,0	1/1:1,20:21:57.18:772,57,0	1/1:0,16:16:48.16:672,48,0	0/0:20,0:20:60.21:0,60,1100	0/0:25,0:25:72.25:0,72,1311	0/0:15,0:15:45.15:0,45,819	0/0:33,0:33:90.31:0,90,1643	1/1:0,21:21:63.20:865,63,0	1/1:0,24:24:72.24:1006,72,0	1/1:0,8:8:24.08:336,24,0
chr10	70218908	.	TA	T	3722.68	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.443;DP=670;FS=3.913;HRun=5;HaplotypeScore=78.1743;InbreedingCoeff=0.9697;MQ=94.38;MQ0=0;MQRankSum=-3.227;QD=28.64;ReadPosRankSum=0.892;VQSLOD=4.0724;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,1800	1/1:0,6:6:18.05:204,18,0	0/0:31,0:31:81.68:0,82,1118	0/0:28,0:28:66.92:0,67,874	0/0:20,0:20:57.19:0,57,779	0/0:30,0:30:89.85:0,90,1179	0/0:24,0:24:72.23:0,72,969	0/0:28,0:28:78.25:0,78,1052	0/0:14,0:14:39.13:0,39,533	0/0:23,0:23:69.22:0,69,932	0/0:25,0:25:75.21:0,75,986	0/0:28,0:28:75.24:0,75,1010	0/0:16,0:16:45.15:0,45,615	0/0:20,0:20:57.19:0,57,775	0/0:30,0:30:81.26:0,81,1094	0/0:27,0:27:81.25:0,81,1077	0/0:41,0:41:99:0,117,1585	0/0:19,0:19:57.19:0,57,780	1/1:2,25:26:75.21:851,75,0	1/1:1,15:16:45.13:510,45,0	1/1:0,23:23:60.17:681,60,0	0/0:23,0:23:69.21:0,69,902	0/0:25,0:25:63.19:0,63,832	0/0:22,0:22:63.18:0,63,829	0/0:20,0:20:57.18:0,57,763	1/1:1,16:17:4.04:422,4,0	1/1:3,31:34:75.18:851,75,0	1/1:0,7:7:18.05:204,18,0
chr10	70219155	.	AGT	A	1438.49	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=19.371;DP=626;FS=0.968;HRun=0;HaplotypeScore=127.2164;InbreedingCoeff=0.9901;MQ=78.87;MQ0=0;MQRankSum=-2.181;QD=4.67;ReadPosRankSum=3.054;VQSLOD=2.4796;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:46.65:124,47,0	0/0:4,0:4:12.04:0,12,227	0/0:25,0:25:68.40:0,68,1204	0/0:22,0:21:43.90:0,44,920	1/1:20,0:20:26.40:93,26,0	0/0:22,0:22:66.23:0,66,1241	0/0:38,0:38:99:0,111,2063	1/1:2,15:17:47.87:612,48,0	0/0:20,0:20:60.21:0,60,1125	0/0:20,0:20:60.20:0,60,1107	0/0:18,0:18:51.12:0,51,880	0/0:24,0:24:72.25:0,72,1353	0/0:21,0:21:63.17:0,63,1056	0/0:28,0:28:84.26:0,84,1524	0/0:20,0:20:60.19:0,60,1097	0/0:19,0:19:57.18:0,57,1048	1/1:30,0:30:37.58:99,38,0	1/1:21,0:21:31.58:84,32,0	1/1:19,0:19:23.71:94,24,0	1/1:14,0:14:19.13:50,19,0	1/1:37,0:37:38.87:103,39,0	0/0:22,0:22:66.20:0,66,1167	1/1:26,0:26:25.86:70,26,0	1/1:33,0:33:45.09:121,45,0	0/0:15,0:15:45.11:0,45,730	1/1:18,0:18:29.31:110,29,0	1/1:26,0:26:29.54:78,30,0	1/1:10,0:10:12.44:32,12,0
chr10	70219156	.	GT	G	10119.58	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=17.888;DP=620;FS=1.331;HRun=1;HaplotypeScore=83.8095;InbreedingCoeff=0.9955;MQ=79.03;MQ0=0;MQRankSum=-2.551;QD=33.62;ReadPosRankSum=2.729;VQSLOD=4.8674;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:90.30:1256,90,0	0/0:4,0:4:12.04:0,12,180	0/0:25,0:25:67.85:0,68,935	0/0:22,0:21:42.84:0,43,708	1/1:0,19:19:45.05:582,45,0	0/0:22,0:22:66.22:0,66,984	0/0:37,0:37:99:0,111,1639	1/1:15,2:17:46.72:307,47,0	0/0:20,0:20:60.20:0,60,890	0/0:20,0:20:60.19:0,60,881	0/0:18,0:18:51.12:0,51,724	0/0:24,0:24:72.24:0,72,1073	0/0:21,0:21:62.95:0,63,829	0/0:29,0:29:84.25:0,84,1211	0/0:21,0:21:63.19:0,63,900	0/0:19,0:19:57.18:0,57,833	1/1:0,29:29:72.24:1003,72,0	1/1:0,21:21:60.20:836,60,0	1/1:0,19:19:57.15:744,57,0	1/1:0,14:14:39.13:539,39,0	1/1:0,35:35:75.25:1046,75,0	0/0:22,0:22:66.19:0,66,941	1/1:0,24:24:57.19:785,57,0	1/1:0,33:33:87.29:1214,87,0	0/0:15,0:15:45.07:0,45,585	1/1:0,18:18:51.14:676,51,0	1/1:0,26:26:57.19:795,57,0	1/1:0,10:10:24.08:334,24,0
chr10	70220347	.	A	ACG	2965.39	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=4.251;DP=546;FS=52.807;HRun=0;HaplotypeScore=104.4165;InbreedingCoeff=0.8530;MQ=88.84;MQ0=1;MQRankSum=-5.022;QD=13.36;ReadPosRankSum=-5.432;VQSLOD=0.5908;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:27:10.18:197,10,0	1/1:1,7:9:11.68:241,12,0	0/0:33,0:31:75.63:0,76,1010	0/0:33,0:31:46.75:0,47,702	1/1:0,3:14:14.88:192,15,0	0/0:21,0:22:62.53:0,63,928	0/0:25,0:25:68.53:0,69,965	1/1:5,12:24:45.37:649,45,0	0/0:21,0:22:63.20:0,63,972	0/0:15,0:15:39.12:0,39,602	0/0:10,0:10:27.08:0,27,406	0/0:28,0:28:84.24:0,84,1241	0/0:22,0:23:69.22:0,69,1063	0/0:16,0:16:42.08:0,42,628	0/0:32,0:32:93.23:0,93,1359	0/0:23,0:24:72.16:0,72,1067	1/1:0,3:18:18.05:252,18,0	1/1:3,2:14:15.05:245,15,0	1/1:1,4:19:44.73:358,45,0	1/1:4,0:14:10.91:78,11,0	1/1:12,0:13:27.24:197,27,0	0/0:19,0:20:51.14:0,51,795	1/1:0,1:6:5.88:71,6,0	1/1:2,5:29:18.06:244,18,0	0/0:20,0:20:60.15:0,60,871	0/1:11,0:11:3.23:158,0,3	0/1:20,0:20:2.44:259,0,2	1/1:4,0:4:5.91:41,6,0
chr10	70224587	.	CACG	C	2685.82	PASS	AB=1.000;AC=39;AF=0.750;AN=52;BaseQRankSum=-5.370;DP=311;FS=4.935;HRun=0;HaplotypeScore=77.3572;InbreedingCoeff=0.0958;MQ=58.79;MQ0=25;MQRankSum=0.217;QD=9.70;ReadPosRankSum=-0.402;VQSLOD=2.7174;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:6:0:0,0,0	0/1:11,0:11:5.96:111,0,6	0/1:24,0:11:93.57:140,0,94	0/1:23,0:15:99:123,0,249	1/1:22,1:22:7.98:141,8,0	1/1:12,0:10:1.18:39,1,0	1/1:17,1:16:12.78:195,13,0	1/1:19,0:19:37.23:731,37,0	1/1:2,0:1:2.60:10,3,0	0/1:11,0:10:32.39:186,0,32	1/1:11,0:9:8.04:123,8,0	./.	0/0:4,0:4:3.63:0,4,9	1/1:2,0:2:6.02:83,6,0	0/0:13,0:10:8.12:0,8,27	0/0:6,0:3:0:0,0,0	1/1:2,2:4:1.15:39,1,0	0/1:7,0:7:0.73:31,0,1	1/1:8,0:5:7.79:139,8,0	1/1:20,0:20:17.91:202,18,0	1/1:13,0:11:5.78:83,6,0	1/1:13,0:12:10.19:164,10,0	1/1:9,0:9:7.16:115,7,0	1/1:3,3:4:0.47:1,0,0	0/1:21,0:20:6.46:33,0,6	1/1:10,0:4:6.49:83,6,0	./.	1/1:3,0:1:3.01:42,3,0
chr10	70224589	.	CG	C	4332.89	PASS	AB=0.848;AC=48;AF=0.923;AN=52;BaseQRankSum=-2.910;DP=279;FS=5.668;HRun=1;HaplotypeScore=58.1960;InbreedingCoeff=-0.0004;MQ=65.40;MQ0=25;MQRankSum=-2.307;QD=16.54;ReadPosRankSum=2.677;VQSLOD=5.0957;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:5:3.01:42,3,0	1/1:0,4:10:8.04:137,8,0	0/1:21,5:13:93.58:140,0,94	0/1:20,4:16:99:123,0,227	1/1:2,19:19:32.97:459,33,0	1/1:0,10:10:6.02:83,6,0	1/1:1,17:16:24.05:315,24,0	1/1:0,19:19:57.18:776,57,0	1/1:0,1:1:3.01:42,3,0	1/1:0,8:7:18.06:247,18,0	1/1:0,7:7:11.72:149,12,0	./.	1/1:0,4:4:9.03:125,9,0	1/1:0,2:2:6.02:83,6,0	1/1:0,6:10:11.83:96,12,0	0/0:0,3:3:0:0,0,0	1/1:2,2:4:6.02:84,6,0	1/1:0,7:7:9.03:120,9,0	1/1:0,7:5:15.01:187,15,0	1/1:0,10:10:18.06:251,18,0	1/1:0,10:8:5.84:83,6,0	1/1:0,13:12:15.05:209,15,0	1/1:1,6:7:11.83:139,12,0	1/1:3,2:4:3.01:42,3,0	1/1:1,10:10:18.06:251,18,0	1/1:0,5:4:9.02:109,9,0	./.	1/1:1,1:1:3.01:42,3,0
chr10	70224652	.	AT	A	4202.05	PASS	AB=0.710;AC=34;AF=0.850;AN=40;BaseQRankSum=-3.273;DP=231;FS=0.886;HRun=1;HaplotypeScore=91.7725;InbreedingCoeff=-0.0796;MQ=60.62;MQ0=11;MQRankSum=-3.909;QD=19.36;ReadPosRankSum=3.351;VQSLOD=4.0570;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:1,3:3:0:0,0,0	1/1:0,4:4:3.01:42,3,0	0/1:23,5:15:99:160,0,209	0/1:23,3:16:89.19:89,0,172	1/1:0,15:15:24.08:335,24,0	./.	1/1:0,12:12:10.78:203,11,0	1/1:0,20:19:54.15:733,54,0	./.	1/1:1,12:12:24.08:335,24,0	1/1:1,8:9:18.06:251,18,0	./.	./.	1/1:0,2:2:6.02:84,6,0	1/1:0,2:2:6.02:84,6,0	./.	1/1:0,2:2:3.01:42,3,0	./.	0/1:1,3:3:18.84:75,0,19	1/1:2,24:26:51.15:693,51,0	1/1:1,6:7:5.95:84,6,0	1/1:0,12:12:18.06:251,18,0	1/1:0,8:8:5.59:83,6,0	./.	1/1:0,12:12:21.07:293,21,0	0/1:1,10:11:4.46:325,0,4	./.	1/1:0,4:4:3.01:42,3,0
chr10	70224682	.	TG	T	2747.69	PASS	AB=0.875;AC=37;AF=0.925;AN=40;BaseQRankSum=-1.246;DP=183;FS=0.000;HRun=1;HaplotypeScore=145.9671;InbreedingCoeff=0.1543;MQ=53.17;MQ0=6;MQRankSum=-1.953;QD=16.86;ReadPosRankSum=0.540;VQSLOD=3.7045;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,6:6:3.01:42,3,0	0/0:11,0:2:3.01:0,3,44	0/1:11,1:4:11.76:12,0,48	1/1:0,18:18:14.37:193,14,0	./.	1/1:2,4:6:14.92:134,15,0	1/1:2,3:5:11.72:166,12,0	./.	1/1:1,9:9:21.07:293,21,0	1/1:0,15:15:18.06:232,18,0	1/1:0,4:4:5.99:63,6,0	1/1:0,2:2:3.01:42,3,0	1/1:1,1:2:3.01:37,3,0	./.	./.	1/1:0,1:1:3.01:42,3,0	./.	1/1:0,2:2:6.02:84,6,0	1/1:0,27:27:36.11:458,36,0	1/1:0,4:4:5.94:77,6,0	1/1:0,9:9:18.05:213,18,0	1/1:0,7:7:2.99:36,3,0	./.	1/1:0,16:16:21.06:278,21,0	1/1:1,9:10:13.07:360,13,0	./.	1/1:0,5:5:6.02:84,6,0
chr10	70224695	.	CG	C	5029.02	PASS	AC=44;AF=0.957;AN=46;BaseQRankSum=-0.051;DP=180;FS=1.858;HRun=1;HaplotypeScore=151.4364;InbreedingCoeff=0.3288;MQ=50.37;MQ0=2;MQRankSum=-1.240;QD=29.76;ReadPosRankSum=4.646;VQSLOD=4.6993;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:3.01:42,3,0	1/1:0,8:8:22.32:296,22,0	1/1:8,0:2:2.74:12,3,0	0/0:8,0:3:8.66:0,9,76	1/1:0,18:18:26.45:413,26,0	1/1:0,2:2:6.02:84,6,0	1/1:0,4:4:9.03:126,9,0	1/1:1,4:5:11.73:167,12,0	./.	1/1:0,8:8:18.06:251,18,0	1/1:0,16:16:25.66:427,26,0	1/1:0,4:4:12.04:167,12,0	1/1:0,4:4:9.03:125,9,0	./.	1/1:0,1:1:3.01:42,3,0	1/1:0,4:4:6.02:84,6,0	1/1:0,1:1:3.01:42,3,0	./.	1/1:0,5:5:15.05:210,15,0	1/1:0,22:22:60.16:815,60,0	1/1:0,4:4:5.95:84,6,0	1/1:0,9:9:4.56:134,5,0	1/1:0,8:8:13.84:211,14,0	./.	1/1:0,18:18:41.47:600,41,0	1/1:0,12:12:33.10:456,33,0	./.	1/1:0,7:7:13.06:244,13,0
chr10	70224724	.	CG	C	2036.59	PASS	AB=0.500;AC=41;AF=0.891;AN=46;BaseQRankSum=0.524;DP=138;FS=5.513;HRun=1;HaplotypeScore=187.0683;InbreedingCoeff=0.3700;MQ=59.81;MQ0=0;MQRankSum=-0.102;QD=15.79;ReadPosRankSum=3.233;VQSLOD=3.9678;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:3.81:19,4,0	1/1:1,5:6:14.45:86,14,0	0/0:2,0:1:3.01:0,3,45	0/0:5,1:6:2.97:0,3,20	1/1:0,10:10:15.70:177,16,0	1/1:0,1:1:2.92:17,3,0	0/1:0,3:3:2.33:42,0,2	./.	1/1:0,3:3:0.47:1,0,0	1/1:0,6:6:17.49:100,17,0	1/1:0,14:14:27.61:302,28,0	1/1:0,7:7:11.01:86,11,0	1/1:0,6:6:11.55:63,12,0	./.	1/1:0,4:4:5.81:33,6,0	1/1:0,5:5:8.88:75,9,0	./.	1/1:0,1:1:2.92:17,3,0	1/1:0,2:2:5.81:32,6,0	1/1:0,16:16:36.13:400,36,0	./.	1/1:0,7:7:8.38:80,8,0	1/1:1,7:8:14.91:117,15,0	./.	1/1:0,10:10:23.80:238,24,0	1/1:0,7:7:20.26:111,20,0	1/1:1,2:3:4.56:40,5,0	1/1:0,8:8:15.55:103,16,0
chr10	70224726	.	AG	A	1016.15	PASS	AB=0.500;AC=40;AF=0.870;AN=46;BaseQRankSum=0.726;DP=137;FS=5.473;HRun=1;HaplotypeScore=190.2882;InbreedingCoeff=0.3582;MQ=55.97;MQ0=0;MQRankSum=-2.643;QD=7.88;ReadPosRankSum=3.587;VQSLOD=1.2417;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:2.84:8,3,0	1/1:1,5:6:11.70:44,12,0	0/0:2,0:1:2.98:0,3,22	0/0:5,0:5:2.50:0,2,9	1/1:0,10:10:14.96:99,15,0	1/1:0,1:1:2.37:8,2,0	0/1:0,3:3:4.70:18,0,5	./.	0/1:0,3:3:0:0,0,0	1/1:0,6:6:13.62:45,14,0	1/1:0,14:14:26.07:172,26,0	1/1:0,7:7:8.76:44,9,0	1/1:0,6:6:9.18:30,9,0	./.	1/1:0,4:4:4.44:15,4,0	1/1:0,5:5:7.57:37,8,0	./.	1/1:0,1:1:2.37:8,2,0	1/1:0,2:2:4.44:15,4,0	1/1:0,16:16:35.23:224,35,0	./.	1/1:0,7:7:7.28:45,7,0	1/1:1,7:8:13.28:66,13,0	./.	1/1:0,10:10:21.69:127,22,0	1/1:0,7:7:15.54:51,16,0	1/1:1,2:3:4.51:23,5,0	1/1:0,8:8:9.80:38,10,0
chr10	70224733	.	AG	A	1044.65	PASS	AB=0.523;AC=40;AF=0.909;AN=44;BaseQRankSum=0.970;DP=137;FS=4.875;HRun=1;HaplotypeScore=190.1019;InbreedingCoeff=0.1559;MQ=55.97;MQ0=0;MQRankSum=1.128;QD=8.10;ReadPosRankSum=1.516;VQSLOD=1.0780;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:3.43:20,3,0	0/1:1,5:6:5.78:55,0,6	./.	0/0:5,0:5:0.83:0,1,30	1/1:0,10:10:5.93:28,6,0	1/1:0,1:1:2.97:20,3,0	0/1:0,3:3:2.08:22,0,2	./.	1/1:0,3:3:0.47:1,0,0	1/1:0,6:6:17.73:117,18,0	1/1:0,14:14:22.35:73,22,0	1/1:0,7:7:11.03:70,11,0	1/1:0,6:6:11.61:69,12,0	./.	1/1:0,4:4:5.88:36,6,0	1/1:0,5:5:8.51:49,9,0	./.	1/1:0,1:1:2.98:21,3,0	1/1:0,2:2:5.88:36,6,0	1/1:0,16:16:29.02:102,29,0	./.	1/1:0,7:7:5.86:20,6,0	1/1:1,7:8:12.96:53,13,0	./.	1/1:0,10:10:20.68:95,21,0	1/1:0,7:7:20.45:118,20,0	1/1:1,2:3:3.78:11,4,0	1/1:0,8:8:16.31:121,16,0
chr10	70224738	.	CG	C	1497.64	PASS	AB=0.500;AC=41;AF=0.932;AN=44;BaseQRankSum=0.634;DP=136;FS=5.633;HRun=1;HaplotypeScore=195.7250;InbreedingCoeff=0.2815;MQ=51.78;MQ0=0;MQRankSum=-1.119;QD=11.61;ReadPosRankSum=1.088;VQSLOD=2.1621;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:3.41:19,3,0	1/1:1,5:6:14.48:85,14,0	./.	0/0:5,0:5:6.02:0,6,89	1/1:0,10:10:14.94:97,15,0	1/1:0,1:1:2.96:19,3,0	0/1:0,3:3:3.17:29,0,3	./.	1/1:0,3:3:1.82:5,2,0	1/1:0,6:6:17.47:102,17,0	1/1:0,14:14:30.67:186,31,0	1/1:0,7:7:11.08:74,11,0	1/1:0,6:6:11.63:68,12,0	./.	1/1:0,4:4:5.84:34,6,0	1/1:0,5:5:8.88:60,9,0	./.	1/1:0,1:1:2.94:18,3,0	1/1:0,2:2:5.82:33,6,0	1/1:0,16:16:35.79:234,36,0	./.	1/1:0,7:7:8.53:49,9,0	1/1:1,7:8:14.15:76,14,0	./.	1/1:0,10:10:23.65:157,24,0	1/1:0,7:7:20.31:112,20,0	1/1:1,2:3:4.53:24,5,0	1/1:0,8:8:15.90:112,16,0
chr10	70224744	.	CG	C	611.09	PASS	AB=0.500;AC=41;AF=0.932;AN=44;BaseQRankSum=1.310;DP=134;FS=3.478;HRun=1;HaplotypeScore=199.0074;InbreedingCoeff=0.2667;MQ=47.32;MQ0=0;MQRankSum=-1.863;QD=4.74;ReadPosRankSum=1.821;VQSLOD=0.6246;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:3.31:14,3,0	1/1:1,5:6:11.04:50,11,0	./.	0/0:4,0:4:8.24:0,8,86	1/1:0,10:10:2.20:9,2,0	1/1:0,1:1:2.84:14,3,0	0/1:0,3:3:3.66:15,0,4	./.	1/1:0,3:3:1.55:4,2,0	1/1:0,6:6:17.19:92,17,0	1/1:0,14:14:8.49:30,8,0	1/1:0,7:7:10.36:56,10,0	1/1:0,6:6:10.98:50,11,0	./.	1/1:0,4:4:5.59:25,6,0	1/1:0,5:5:6.17:30,6,0	./.	1/1:0,1:1:2.84:14,3,0	1/1:0,2:2:5.68:29,6,0	1/1:0,16:16:5.95:24,6,0	./.	1/1:0,7:7:2.22:7,2,0	1/1:0,8:8:7.33:28,7,0	./.	1/1:0,10:10:8.44:41,8,0	1/1:0,7:7:19.52:89,20,0	1/1:0,3:3:1.55:4,2,0	1/1:0,8:8:14.38:82,14,0
chr10	70224750	.	AG	A	3214.93	PASS	AC=46;AF=0.920;AN=50;BaseQRankSum=-2.709;DP=213;FS=2.337;HRun=1;HaplotypeScore=266.0302;InbreedingCoeff=0.3877;MQ=41.41;MQ0=0;MQRankSum=-0.837;QD=15.61;ReadPosRankSum=0.111;VQSLOD=3.2388;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:6:9.60:79,10,0	1/1:0,7:7:14.74:173,15,0	./.	0/0:4,0:4:5.98:0,6,64	1/1:0,13:13:9.12:46,9,0	1/1:0,1:1:3.01:42,3,0	1/1:0,11:11:23.68:163,24,0	1/1:0,16:15:42.14:586,42,0	1/1:0,4:4:4.83:38,5,0	1/1:0,11:11:13.47:257,13,0	1/1:0,19:19:23.38:161,23,0	1/1:0,8:8:11.59:172,12,0	1/1:0,7:7:11.22:166,11,0	1/1:0,4:4:3.32:11,3,0	1/1:0,7:7:6.48:85,6,0	1/1:0,8:8:8.19:90,8,0	0/0:0,2:2:0.47:0,0,1	1/1:0,1:1:3.01:42,3,0	1/1:0,3:3:9.03:126,9,0	1/1:0,21:21:21.49:123,21,0	./.	1/1:0,11:11:14.77:104,15,0	1/1:0,9:9:13.09:100,13,0	./.	1/1:0,12:12:14.41:139,14,0	1/1:0,11:11:26.01:311,26,0	1/1:0,7:7:5.05:17,5,0	1/1:0,9:9:20.01:281,20,0
chr10	70224769	.	TG	T	1698.53	PASS	AB=0.532;AC=44;AF=0.846;AN=52;BaseQRankSum=-4.236;DP=220;FS=0.000;HRun=2;HaplotypeScore=273.1708;InbreedingCoeff=0.0222;MQ=33.21;MQ0=0;MQRankSum=-0.252;QD=8.13;ReadPosRankSum=-0.138;VQSLOD=0.6208;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:7:6.32:30,6,0	0/1:1,6:7:1.56:63,0,2	1/1:1,0:1:2.99:23,3,0	./.	1/1:2,12:14:6.93:50,7,0	./.	1/1:0,10:10:0.16:35,0,0	1/1:1,13:13:36.12:467,36,0	1/1:0,5:5:5.20:17,5,0	1/1:0,10:10:3.48:150,3,0	1/1:1,16:17:11.62:83,12,0	1/1:2,7:9:1.51:44,2,0	1/1:0,7:7:11.53:96,12,0	1/1:0,4:4:3.49:11,3,0	1/1:0,7:7:0.82:30,1,0	1/1:1,7:8:3.12:23,3,0	1/1:0,4:4:1.41:5,1,0	1/1:0,2:2:4.83:44,5,0	1/1:0,3:3:6.02:78,6,0	0/1:3,20:23:9.88:38,0,10	0/0:0,1:1:0:0,0,0	1/1:0,11:11:6.45:18,6,0	0/1:0,10:10:0.67:16,0,1	1/1:0,3:3:2.04:6,2,0	0/1:2,8:10:6.28:15,0,6	1/1:1,12:13:11.07:223,11,0	0/0:0,8:8:0.03:0,0,5	1/1:0,9:9:18.80:226,19,0
chr10	70224852	.	CG	C	1688.22	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-1.683;DP=219;FS=9.213;HRun=1;HaplotypeScore=157.8653;InbreedingCoeff=0.0850;MQ=60.64;MQ0=3;MQRankSum=0.235;QD=7.78;ReadPosRankSum=1.670;VQSLOD=0.4069;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:18.41:127,18,0	1/1:0,4:4:5.66:30,6,0	1/1:8,0:4:2.83:27,3,0	0/1:15,0:7:16.84:17,0,28	1/1:0,9:9:4.26:26,4,0	1/1:0,5:5:4.93:30,5,0	1/1:0,7:7:7.84:54,8,0	1/1:0,6:6:14.90:109,15,0	1/1:0,9:9:21.56:138,22,0	1/1:0,9:9:20.76:162,21,0	1/1:0,9:9:5.51:44,6,0	1/1:0,7:7:8.70:62,9,0	1/1:0,5:5:8.70:63,9,0	1/1:0,5:5:7.75:46,8,0	1/1:0,9:9:5.18:41,5,0	1/1:0,11:10:14.59:94,15,0	1/1:0,8:9:16.02:93,16,0	1/1:0,5:5:13.76:96,14,0	1/1:0,4:4:5.97:46,6,0	1/1:0,9:9:1.64:4,2,0	0/0:0,2:2:0:0,0,0	1/1:0,7:7:5.38:27,5,0	1/1:1,8:9:7.47:34,7,0	1/1:0,8:7:7.97:46,8,0	1/1:0,9:9:6.73:39,7,0	1/1:0,8:8:12.93:135,13,0	1/1:0,11:11:14.93:114,15,0	1/1:0,4:4:10.77:74,11,0
chr10	70224854	.	CG	C	1704.78	PASS	AB=0.972;AC=52;AF=0.929;AN=56;BaseQRankSum=-1.681;DP=222;FS=10.905;HRun=1;HaplotypeScore=157.7903;InbreedingCoeff=0.1188;MQ=60.24;MQ0=3;MQRankSum=-0.047;QD=7.75;ReadPosRankSum=1.442;VQSLOD=-0.0623;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:15.75:107,16,0	1/1:0,4:4:5.66:30,6,0	0/1:9,0:4:12.06:28,0,12	0/1:15,1:7:5.42:5,0,44	1/1:0,9:9:4.75:27,5,0	1/1:0,5:5:4.93:30,5,0	1/1:0,7:7:8.33:55,8,0	1/1:0,6:6:14.90:109,15,0	1/1:0,9:9:21.56:138,22,0	1/1:0,9:9:20.76:162,21,0	1/1:0,9:9:11.43:68,11,0	1/1:0,7:7:8.70:62,9,0	1/1:0,5:5:8.70:63,9,0	1/1:0,5:5:7.75:46,8,0	1/1:0,9:9:5.18:41,5,0	1/1:0,11:10:14.54:94,15,0	1/1:1,8:9:19.92:119,20,0	1/1:0,5:5:13.76:96,14,0	1/1:0,4:4:5.97:46,6,0	1/1:0,9:9:2.13:5,2,0	0/0:0,2:2:0:0,0,0	1/1:0,7:7:5.38:28,5,0	1/1:0,9:9:7.47:34,7,0	1/1:0,8:7:7.97:46,8,0	1/1:0,9:9:6.76:40,7,0	1/1:0,8:8:12.93:137,13,0	1/1:0,11:11:14.93:114,15,0	1/1:0,4:4:10.77:74,11,0
chr10	70224868	.	AG	A	2410.08	PASS	AB=0.509;AC=39;AF=0.722;AN=54;BaseQRankSum=0.125;DP=312;FS=35.424;HRun=1;HaplotypeScore=141.1803;InbreedingCoeff=0.4329;MQ=55.30;MQ0=15;MQRankSum=-2.687;QD=12.05;ReadPosRankSum=4.466;VQSLOD=0.4095;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:4,14:18:0.60:32,0,1	1/1:0,5:5:2.93:38,3,0	0/0:44,2:8:21.04:0,21,277	0/0:42,5:8:8.67:0,9,73	0/1:0,10:10:4.45:29,0,4	0/0:0,6:6:0.43:0,0,1	1/1:0,9:9:2.60:42,3,0	1/1:0,10:10:24.08:348,24,0	1/1:0,9:9:12.04:165,12,0	1/1:1,12:13:25.81:423,26,0	0/1:0,9:9:0.06:0,0,0	1/1:0,11:10:11.84:166,12,0	1/1:0,5:5:2.82:45,3,0	1/1:0,5:5:3.01:42,3,0	0/1:0,11:10:0.09:1,0,0	1/1:0,11:9:9:128,9,0	1/1:1,7:8:15.05:217,15,0	1/1:0,1:4:11.76:97,12,0	1/1:0,4:4:12.04:174,12,0	0/1:0,8:8:0:1,0,0	0/0:1,4:5:0:0,0,0	0/1:0,9:9:0.21:0,0,0	1/1:0,9:9:0.87:3,1,0	./.	0/1:0,11:11:0.24:0,0,1	1/1:0,6:6:18.06:267,18,0	1/1:0,11:11:12.01:175,12,0	1/1:0,4:4:10.85:136,11,0
chr10	70224879	.	ACTACAT	A	4278.82	PASS	AB=0.936;AC=45;AF=0.804;AN=56;BaseQRankSum=0.343;DP=405;FS=21.364;HRun=0;HaplotypeScore=139.7527;InbreedingCoeff=0.3101;MQ=49.89;MQ0=31;MQRankSum=-1.208;QD=13.71;ReadPosRankSum=3.073;VQSLOD=2.9080;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:19:14.03:217,14,0	1/1:4,0:4:3.01:72,3,0	0/0:66,0:10:27.01:0,27,446	0/1:67,0:9:25.38:25,0,29	1/1:12,1:11:5.81:136,6,0	1/1:7,0:7:3.01:38,3,0	1/1:12,0:12:6.58:111,7,0	1/1:10,0:10:16.47:336,16,0	1/1:12,0:12:12.04:183,12,0	1/1:16,0:16:30.06:672,30,0	0/1:10,0:10:0:0,0,0	1/1:10,0:9:8.99:170,9,0	1/1:7,0:7:5.05:78,5,0	1/1:6,0:6:3.01:72,3,0	1/1:16,0:15:0.43:1,0,0	1/1:15,0:13:12.04:258,12,0	0/1:10,0:10:6.81:276,0,7	1/1:4,0:4:12.04:222,12,0	1/1:5,1:5:9.50:218,10,0	1/1:12,0:12:3.01:72,3,0	0/1:4,1:5:0:0,0,0	0/1:9,2:11:0.11:0,0,0	0/0:9,6:15:0.42:0,0,2	0/0:12,0:10:0.47:0,0,1	1/1:13,0:13:2.82:69,3,0	1/1:7,1:8:24.08:546,24,0	1/1:15,0:15:15.05:362,15,0	1/1:4,0:4:6.49:145,6,0
chr10	70224882	.	ACAT	A	2043.22	PASS	AB=0.988;AC=47;AF=0.839;AN=56;BaseQRankSum=0.439;DP=414;FS=15.290;HRun=0;HaplotypeScore=134.8355;InbreedingCoeff=0.3337;MQ=49.41;MQ0=33;MQRankSum=-2.099;QD=5.97;ReadPosRankSum=1.895;VQSLOD=2.0908;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:18:7.80:68,8,0	1/1:3,0:3:2.99:24,3,0	0/0:65,0:10:27.08:0,27,403	0/1:68,0:9:6.52:7,0,24	1/1:13,0:11:5.99:51,6,0	1/1:8,0:8:1.88:14,2,0	1/1:13,0:13:8.98:84,9,0	1/1:13,0:13:35.61:277,36,0	1/1:11,0:11:11.98:103,12,0	1/1:17,0:17:18.76:328,19,0	0/1:10,0:10:0.01:0,0,0	1/1:8,4:11:10.86:112,11,0	1/1:7,0:7:5.66:45,6,0	1/1:5,1:6:3.01:31,3,0	0/1:15,1:15:0.09:1,0,0	1/1:10,4:12:12:133,12,0	1/1:12,0:12:0.98:115,1,0	1/1:5,0:5:11.98:101,12,0	1/1:6,0:5:11.95:112,12,0	1/1:11,0:11:3.01:34,3,0	0/0:7,0:5:0:0,0,0	0/1:11,0:11:0.11:0,0,0	1/1:15,0:15:0.93:3,1,0	0/1:12,0:10:0:0,0,0	1/1:11,1:12:2.46:27,2,0	1/1:11,0:10:29.82:269,30,0	1/1:13,0:13:15.03:157,15,0	1/1:4,0:4:2.64:57,3,0
chr10	70224884	.	AT	A	2338.97	PASS	AB=0.646;AC=48;AF=0.857;AN=56;BaseQRankSum=0.626;DP=425;FS=18.927;HRun=1;HaplotypeScore=133.2058;InbreedingCoeff=0.3605;MQ=49.09;MQ0=33;MQRankSum=-2.527;QD=6.50;ReadPosRankSum=1.639;VQSLOD=-0.5946;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:18:13.89:93,14,0	1/1:2,1:3:3:28,3,0	0/0:64,1:10:27.08:0,27,358	0/1:70,0:9:6.59:7,0,25	1/1:4,9:11:5.67:46,6,0	1/1:0,7:8:1:4,1,0	1/1:3,11:14:7.04:75,7,0	1/1:7,6:13:33.67:258,34,0	1/1:2,9:11:12.04:154,12,0	1/1:6,13:19:31.88:436,32,0	0/1:1,9:10:0.01:0,0,0	1/1:7,6:12:11.82:128,12,0	1/1:2,5:7:4.86:40,5,0	1/1:2,4:6:3.01:31,3,0	0/1:3,14:16:0.09:1,0,0	1/1:7,7:12:11.99:121,12,0	1/1:5,7:12:8.32:126,8,0	1/1:6,1:7:11.70:84,12,0	1/1:4,2:5:12.04:140,12,0	1/1:3,6:11:3.01:38,3,0	1/1:5,3:6:2.64:40,3,0	0/1:2,9:11:0.11:0,0,0	0/1:8,7:15:0.32:1,0,0	0/1:1,9:10:0:0,0,0	1/1:1,10:12:2.42:30,2,0	1/1:5,7:11:30.08:337,30,0	1/1:1,12:13:15.03:159,15,0	1/1:0,3:4:7.83:74,8,0
chr10	70224890	.	C	CCGATGT	589.47	PASS	AB=0.943;AC=7;AF=0.125;AN=56;BaseQRankSum=0.057;DP=472;FS=0.000;HRun=0;HaplotypeScore=185.0623;InbreedingCoeff=-0.0143;MQ=42.45;MQ0=35;MQRankSum=1.120;QD=5.72;ReadPosRankSum=-0.638;VQSLOD=2.4343;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:9.54:0,10,181	0/0:3,0:3:3.01:0,3,73	0/0:64,0:11:9.39:0,9,499	0/0:71,0:9:9.43:0,9,166	0/0:15,0:13:9.03:0,9,183	0/1:11,0:11:16.32:16,0,102	0/1:17,2:19:82.79:83,0,322	0/1:9,7:15:99:563,0,290	0/0:13,0:13:15.05:0,15,345	0/0:19,0:19:42.14:0,42,959	0/1:12,0:12:0:0,0,0	0/0:15,0:14:12.04:0,12,278	0/0:9,0:9:11.02:0,11,170	0/0:8,0:8:5.75:0,6,142	0/1:18,0:17:0.72:1,0,1	0/0:16,0:14:12.04:0,12,268	0/0:13,0:13:9.82:0,10,319	0/0:10,0:10:23.87:0,24,409	0/0:10,0:9:18.06:0,18,408	0/0:13,0:12:3:0,3,29	0/0:10,0:7:3.01:0,3,65	0/0:11,0:11:3.01:0,3,68	0/0:16,0:17:1.25:0,1,4	0/1:14,0:12:4.15:4,0,13	0/0:13,0:13:5.72:0,6,135	0/1:13,0:11:29.94:30,0,647	0/0:14,0:14:17.97:0,18,399	0/0:3,0:3:5.99:0,6,104
chr10	70224914	.	CAT	C	256.39	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.263;DP=456;FS=4.689;HRun=0;HaplotypeScore=102.7859;InbreedingCoeff=0.6046;MQ=43.44;MQ0=11;MQRankSum=-1.910;QD=15.08;ReadPosRankSum=-1.310;VQSLOD=2.8153;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:7.26:0,7,205	0/0:5,0:5:8.67:0,9,60	0/0:31,0:13:32.85:0,33,334	0/0:44,0:11:23.18:0,23,255	0/0:17,0:15:31.99:0,32,280	0/0:9,0:9:11.89:0,12,86	0/0:16,0:16:21.73:0,22,230	1/1:9,8:16:46.98:351,47,0	0/0:14,0:14:22.99:0,23,178	0/0:20,0:20:12.63:0,13,283	0/0:10,0:10:8.99:0,9,75	0/0:20,0:19:26.70:0,27,208	0/0:12,0:12:23.82:0,24,200	0/0:11,0:11:15.44:0,15,123	0/0:21,0:19:11.98:0,12,99	0/0:19,0:17:23.74:0,24,176	0/0:12,0:12:22.03:0,22,140	0/0:10,0:10:7.46:0,7,215	0/0:14,0:12:23.84:0,24,219	0/0:16,0:15:17.91:0,18,139	0/0:16,0:12:23.87:0,24,193	0/0:9,0:9:5.99:0,6,50	0/0:16,0:16:11.94:0,12,98	0/0:11,0:10:11.97:0,12,96	0/0:22,0:22:21.47:0,21,216	0/0:15,0:13:15.44:0,15,261	0/0:12,0:12:26.26:0,26,200	0/0:7,0:6:14.94:0,15,117
chr10	70225492	.	CT	C	3557.40	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.688;DP=668;FS=16.095;HRun=3;HaplotypeScore=88.6226;InbreedingCoeff=0.9956;MQ=78.55;MQ0=0;MQRankSum=-1.163;QD=27.36;ReadPosRankSum=1.134;VQSLOD=2.0769;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,1766	0/0:8,0:8:21.07:0,21,301	0/0:21,0:21:51.16:0,51,701	0/0:8,0:9:24.51:0,25,323	0/0:36,0:36:99:0,105,1492	0/0:24,0:24:72.24:0,72,1035	0/0:22,0:22:66.21:0,66,930	0/0:20,0:20:57.18:0,57,804	0/0:27,0:27:81.27:0,81,1166	0/0:27,0:27:78.26:0,78,1119	0/0:27,0:27:78.25:0,78,1103	0/0:29,0:29:87.28:0,87,1232	0/0:15,0:15:45.15:0,45,645	0/0:20,0:20:60.20:0,60,862	0/0:36,0:36:99:0,102,1448	0/0:22,0:22:63.20:0,63,887	0/0:31,0:31:87.29:0,87,1249	0/0:29,0:29:84.21:0,84,1162	1/1:1,15:16:45.10:470,45,0	1/1:4,24:28:71.10:746,71,0	1/1:4,18:22:59.61:597,60,0	0/0:22,0:22:66.20:0,66,926	0/0:21,0:21:60.16:0,60,840	0/0:26,0:26:78.26:0,78,1123	0/0:23,0:23:66.22:0,66,948	1/1:4,28:32:45.38:838,45,0	1/1:3,24:27:74.76:746,75,0	1/1:0,5:5:15.04:161,15,0
chr10	70227955	.	T	TATATAACGC	4293.53	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.493;DP=925;FS=1.148;HRun=0;HaplotypeScore=273.1955;InbreedingCoeff=0.9988;MQ=71.14;MQ0=1;MQRankSum=-6.039;QD=89.45;ReadPosRankSum=-5.407;VQSLOD=3.0089;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,3733	0/0:17,0:17:51.14:0,51,1306	0/0:41,0:38:98.89:0,99,2501	0/0:27,0:25:61.29:0,61,1454	0/0:32,0:32:93.25:0,93,2462	0/0:27,0:27:78.22:0,78,2203	0/0:39,0:39:99:0,114,3222	1/1:18,22:48:99:4294,138,0	0/0:31,0:31:93.25:0,93,2306	0/0:48,0:48:99:0,138,3792	0/0:20,0:20:57.18:0,57,1594	0/0:30,0:30:90.21:0,90,2188	0/0:38,0:38:99:0,105,2968	0/0:44,0:44:99:0,126,3627	0/0:44,0:44:99:0,132,3789	0/0:22,0:22:66.23:0,66,1996	0/0:38,0:38:99:0,111,2944	0/0:18,0:18:27.50:0,28,1433	0/0:15,0:15:42.14:0,42,1194	0/0:37,0:37:99:0,111,3100	0/0:67,0:67:99:0,196,5578	0/0:27,0:27:78.22:0,78,2130	0/0:23,0:23:66.20:0,66,1946	0/0:55,0:55:99:0,150,4423	0/0:21,0:21:63.17:0,63,1778	0/0:34,0:34:96.30:0,96,2773	0/0:26,0:26:78.22:0,78,2231	0/0:11,0:11:33.06:0,33,829
chr10	70229866	.	A	AACAC	1646.52	PASS	AB=0.811;AC=25;AF=0.521;AN=48;BaseQRankSum=-3.252;DP=549;FS=10.129;HRun=0;HaplotypeScore=110.0567;InbreedingCoeff=0.3923;MQ=64.69;MQ0=6;MQRankSum=1.588;QD=4.60;ReadPosRankSum=-1.900;VQSLOD=1.4323;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:39:0.41:0,0,126	./.	./.	./.	./.	1/1:20,0:20:14.94:246,15,0	1/1:18,1:22:8.25:94,8,0	0/1:20,0:20:0:0,0,0	1/1:7,0:12:5.49:24,5,0	1/1:20,0:20:10.85:166,11,0	0/1:11,5:16:0:0,0,0	0/1:16,5:23:56.13:61,0,56	1/1:31,2:33:20.76:357,21,0	1/1:14,4:21:3.01:70,3,0	1/1:17,9:29:9.03:208,9,0	1/1:8,6:17:12.04:278,12,0	1/1:16,0:18:6.23:49,6,0	0/1:9,1:19:33.52:106,0,34	0/0:13,0:13:5.50:0,6,46	0/0:14,0:16:5.79:0,6,53	0/0:40,0:40:6.01:0,6,56	0/1:13,4:20:0:0,0,0	0/0:11,0:12:9.02:0,9,111	0/0:30,0:30:18.05:0,18,274	0/1:20,6:28:33.99:140,0,34	0/0:15,0:18:8.76:0,9,71	0/0:6,0:8:2.05:0,2,27	0/0:5,0:5:3:0,3,28
chr10	70230343	.	C	CG	895.79	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.661;DP=855;FS=10.182;HRun=0;HaplotypeScore=80.3409;InbreedingCoeff=0.9980;MQ=83.17;MQ0=0;MQRankSum=-0.380;QD=34.45;ReadPosRankSum=-3.663;VQSLOD=1.4870;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1718	0/0:15,0:15:45.15:0,45,629	0/0:25,0:25:72.22:0,72,962	0/0:24,0:24:63.17:0,63,847	0/0:29,0:29:87.29:0,87,1217	0/0:18,0:18:51.17:0,51,713	0/0:37,0:37:99:0,111,1529	1/1:1,25:26:72.24:991,72,0	0/0:27,0:27:81.27:0,81,1133	0/0:30,0:30:90.30:0,90,1259	0/0:28,0:28:78.26:0,78,1090	0/0:36,0:36:99:0,105,1452	0/0:34,0:34:99:0,102,1410	0/0:31,0:31:87.29:0,87,1216	0/0:41,0:41:99:0,120,1679	0/0:32,0:32:96.31:0,96,1326	0/0:44,0:44:99:0,129,1804	0/0:34,0:34:99:0,99,1345	0/0:24,0:24:69.21:0,69,935	0/0:39,0:39:99:0,117,1636	0/0:57,0:57:99:0,169,2345	0/0:27,0:27:81.27:0,81,1132	0/0:35,0:35:99:0,105,1446	0/0:28,0:28:84.28:0,84,1175	0/0:25,0:25:72.24:0,72,1006	0/0:38,0:38:99:0,114,1594	0/0:21,0:21:63.21:0,63,875	0/0:8,0:8:24.07:0,24,319
chr10	70231398	.	C	CT	5124.46	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.214;DP=639;FS=19.861;HRun=1;HaplotypeScore=66.5744;InbreedingCoeff=0.9994;MQ=68.84;MQ0=0;MQRankSum=-0.478;QD=37.68;ReadPosRankSum=3.818;VQSLOD=3.0556;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,38:40:99:1547,105,0	0/0:12,0:12:36.12:0,36,467	0/0:19,0:18:48.09:0,48,583	0/0:26,0:25:49.18:0,49,786	1/1:1,12:13:36.12:540,36,0	0/0:10,0:10:30.10:0,30,390	0/0:30,0:30:87.28:0,87,1130	0/0:31,0:31:93.29:0,93,1182	0/0:23,0:23:69.22:0,69,895	0/0:24,0:24:66.20:0,66,838	0/0:21,0:21:63.20:0,63,816	0/0:24,0:24:69.21:0,69,880	0/0:29,0:29:78.25:0,78,1012	0/0:27,0:27:81.26:0,81,1051	0/0:30,0:30:87.28:0,87,1129	0/0:14,0:14:42.14:0,42,545	1/1:1,31:32:51.30:1240,51,0	0/0:11,0:11:30.10:0,30,389	0/0:24,0:24:69.22:0,69,894	0/0:18,0:18:48.14:0,48,608	0/0:47,0:47:99:0,132,1711	0/0:26,0:26:75.24:0,75,972	1/1:0,22:22:54.18:809,54,0	1/1:1,28:28:66.22:989,66,0	0/0:13,0:13:39.13:0,39,506	0/0:23,0:23:69.22:0,69,895	0/0:11,0:11:30.10:0,30,389	0/0:10,0:10:30.10:0,30,389
chr10	70231489	.	AACACAC	A	218.46	PASS	AB=1.000;AC=5;AF=0.096;AN=52;BaseQRankSum=3.402;DP=478;FS=0.000;HRun=0;HaplotypeScore=99.8809;InbreedingCoeff=0.5798;MQ=63.39;MQ0=19;MQRankSum=0.148;QD=4.12;ReadPosRankSum=-0.733;VQSLOD=1.5060;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:15.05:0,15,296	1/1:6,0:6:8.91:61,9,0	./.	./.	0/0:16,0:15:18.06:0,18,456	0/0:11,0:11:18.53:0,19,396	0/0:24,0:24:6.87:0,7,349	1/1:21,7:25:21.02:266,21,0	0/0:21,0:20:30.51:0,31,558	0/0:29,0:28:45.15:0,45,1069	0/0:13,0:12:15.05:0,15,305	0/0:15,0:15:8.82:0,9,214	0/0:15,0:14:12.04:0,12,240	0/0:15,0:14:11.86:0,12,231	0/0:14,0:14:24.07:0,24,538	0/0:13,0:12:18.06:0,18,384	0/0:19,0:19:30:0,30,504	0/0:10,0:7:12.04:0,12,256	0/0:20,0:19:23.07:0,23,467	0/0:13,0:12:9.01:0,9,189	0/0:25,0:24:18.06:0,18,395	0/1:19,0:19:8.37:8,0,130	0/0:7,0:7:6.02:0,6,139	0/0:20,0:19:6.02:0,6,129	0/0:14,0:14:18.05:0,18,357	0/0:17,0:16:18.04:0,18,373	0/0:15,0:14:15.03:0,15,303	0/0:8,0:6:12.01:0,12,228
chr10	70233613	.	AAAGGAAGGAAGGAAGG	A	3186.69	PASS	AB=0.973;AC=13;AF=0.250;AN=52;BaseQRankSum=8.086;DP=647;FS=4.678;HRun=0;HaplotypeScore=304.3222;InbreedingCoeff=0.1126;MQ=47.08;MQ0=31;MQRankSum=-7.423;QD=11.67;ReadPosRankSum=-2.533;VQSLOD=1.7678;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:49.39:0,49,1249	0/0:7,0:7:17.09:0,17,431	./.	./.	0/0:32,0:30:69.17:0,69,964	0/0:22,0:22:51.05:0,51,1269	0/0:27,0:26:50.93:0,51,1586	0/0:24,0:18:6.88:0,7,84	0/0:26,0:24:42.01:0,42,1452	0/1:45,0:41:81.60:82,0,3515	0/1:13,6:19:83.67:84,0,997	0/1:17,0:15:99:138,0,512	0/0:25,0:21:60.19:0,60,1891	0/0:27,0:26:63.22:0,63,1818	0/1:26,0:24:47.31:47,0,1498	0/1:26,0:24:99:158,0,1429	0/0:19,0:17:36.06:0,36,639	0/0:26,0:20:11.37:0,11,184	0/1:24,0:19:15.47:419,0,15	0/1:43,0:41:2.53:826,0,3	1/1:5,0:5:10.15:112,10,0	0/0:28,0:27:72.08:0,72,2283	0/0:23,0:23:38.88:0,39,1102	0/0:34,0:31:85.98:0,86,1866	0/0:28,0:27:54.06:0,54,2004	0/1:31,0:29:99:710,0,146	1/1:25,0:25:54.15:683,54,0	0/1:12,0:7:13.12:87,0,13
chr10	70233629	.	GAAGAAAGA	G	4919.56	PASS	AB=1.000;AC=20;AF=0.385;AN=52;BaseQRankSum=14.822;DP=678;FS=9.751;HRun=0;HaplotypeScore=217.7872;InbreedingCoeff=0.1585;MQ=47.18;MQ0=27;MQRankSum=-5.933;QD=12.42;ReadPosRankSum=-1.036;VQSLOD=2.5947;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:26:60.04:668,60,0	0/0:9,0:9:20.99:0,21,241	./.	./.	1/1:29,0:27:38.20:595,38,0	0/0:21,0:21:51.16:0,51,1179	0/0:25,0:24:54.24:0,54,1523	1/1:20,0:18:3.81:199,4,0	0/0:24,0:22:4.38:0,4,1328	0/0:48,0:44:47.02:0,47,3196	0/0:22,0:22:7.01:0,7,823	0/0:19,0:17:7.81:0,8,797	0/0:27,0:23:66.17:0,66,1671	0/0:25,0:24:57.03:0,57,1386	0/0:28,0:26:22.85:0,23,1509	0/1:28,0:26:69.60:70,0,1178	1/1:18,0:16:26.40:261,26,0	1/1:10,16:20:12.05:217,12,0	0/1:26,0:22:99:202,0,200	0/1:42,0:41:99:706,0,118	0/1:6,0:6:8.85:66,0,9	0/0:29,0:28:74.74:0,75,2065	0/1:26,0:26:52.52:53,0,254	0/1:33,0:30:99:551,0,280	0/1:33,0:32:0.02:0,0,2367	0/1:32,0:30:99:676,0,196	0/1:35,0:35:63.62:526,0,64	0/1:14,0:9:29.35:130,0,29
chr10	70233632	.	GAAA	G	776.70	PASS	AB=0.968;AC=7;AF=0.130;AN=54;BaseQRankSum=6.714;DP=687;FS=0.000;HRun=3;HaplotypeScore=170.9447;InbreedingCoeff=0.0485;MQ=47.52;MQ0=27;MQRankSum=2.586;QD=5.75;ReadPosRankSum=0.192;VQSLOD=-0.4902;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,1:24:12.03:311,0,12	0/0:9,0:9:20.84:0,21,296	1/1:3,0:1:2.04:6,2,0	./.	0/1:26,3:27:50.99:231,0,51	0/0:21,0:21:54.17:0,54,1160	0/0:25,0:24:72.04:0,72,1510	0/0:22,0:20:37.46:0,37,389	0/0:24,0:22:29.27:0,29,1135	0/0:48,0:44:54.48:0,54,2752	0/0:22,0:22:10.19:0,10,849	0/0:18,0:16:10.22:0,10,679	0/0:29,0:25:72.23:0,72,1566	0/0:24,0:23:57.20:0,57,1334	0/0:28,0:26:47.04:0,47,1393	0/0:27,3:28:9.73:0,10,1430	0/1:19,0:17:28.09:28,0,94	0/1:26,0:20:30:30,0,54	0/0:24,0:20:36.07:0,36,608	0/0:41,0:40:64.79:0,65,748	0/0:6,0:6:14.44:0,14,99	0/0:30,0:29:78.22:0,78,1717	0/0:24,2:26:9.12:0,9,554	0/1:31,1:29:99:292,0,570	0/0:34,0:33:90.21:0,90,1942	0/0:34,0:32:74.86:0,75,779	0/0:35,0:35:45.13:0,45,374	0/0:18,0:13:13.11:0,13,90
chr10	70233637	.	AAAGG	A	2283.40	PASS	AB=0.978;AC=16;AF=0.296;AN=54;BaseQRankSum=15.103;DP=690;FS=9.693;HRun=0;HaplotypeScore=174.4166;InbreedingCoeff=-0.0118;MQ=48.11;MQ0=25;MQRankSum=-5.118;QD=7.03;ReadPosRankSum=3.646;VQSLOD=1.9731;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:24:19.05:195,0,19	1/1:9,0:9:1.37:107,1,0	0/0:5,0:3:2.19:0,2,71	./.	1/1:29,0:27:3.67:237,4,0	0/0:23,0:23:57.05:0,57,1006	0/0:27,0:26:72.04:0,72,1185	0/1:25,0:24:95.50:223,0,95	0/0:23,0:21:48.05:0,48,991	0/0:45,0:41:99:0,117,2168	0/0:22,0:22:11:0,11,548	0/0:18,0:16:35.96:0,36,626	0/0:28,0:24:60.17:0,60,1228	0/0:24,0:23:51.06:0,51,935	0/0:28,0:26:62.98:0,63,1180	0/0:29,0:27:5.16:0,5,682	0/1:13,5:16:6.51:7,0,59	0/1:26,0:20:23.21:23,0,34	0/1:25,0:21:88.02:151,0,88	0/1:42,0:41:28.68:425,0,29	0/1:7,0:7:15.78:42,0,16	0/0:30,0:29:72.15:0,72,1475	0/0:25,0:25:6.86:0,7,207	0/1:33,0:30:99:189,0,159	0/0:33,1:33:64.66:0,65,1814	0/1:33,0:32:93.50:397,0,94	0/1:36,0:36:14.59:319,0,15	1/1:16,0:11:11.99:124,12,0
chr10	70233641	.	GAAGAAAGA	G	6046.30	PASS	AB=0.849;AC=17;AF=0.304;AN=56;BaseQRankSum=10.303;DP=682;FS=20.579;HRun=0;HaplotypeScore=197.8740;InbreedingCoeff=0.5686;MQ=48.67;MQ0=25;MQRankSum=-8.287;QD=21.37;ReadPosRankSum=-0.946;VQSLOD=2.3986;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:22:5.26:5,0,128	0/0:1,0:9:23.88:0,24,203	0/0:5,0:3:8.52:0,9,160	0/0:6,0:1:2.92:0,3,17	0/0:12,0:28:13.62:0,14,152	0/0:23,0:23:54.17:0,54,1835	0/0:27,0:26:66.20:0,66,1980	1/1:6,21:26:62.94:925,63,0	0/0:24,0:22:48.16:0,48,1744	0/0:43,0:40:89.66:0,90,3222	0/0:22,0:22:33.04:0,33,944	0/0:17,0:16:30.10:0,30,1147	0/0:26,0:22:57.20:0,57,2131	0/0:23,0:22:36.12:0,36,1417	0/0:28,0:26:51.16:0,51,1833	0/0:29,0:27:49.69:0,50,1036	0/1:17,0:15:6.78:7,0,51	1/1:26,0:20:9.01:98,9,0	1/1:11,15:22:6.97:678,7,0	1/1:10,29:38:53.96:1347,54,0	0/1:3,3:6:11.08:143,0,11	0/0:30,0:29:72.25:0,72,2544	0/0:11,0:26:8.16:0,8,77	0/1:34,0:31:0.48:0,0,84	0/0:31,0:30:81.28:0,81,3169	0/1:9,24:32:32.35:1464,0,32	1/1:5,31:36:42.14:1073,42,0	1/1:7,8:10:12.04:304,12,0
chr10	70235157	.	G	GCTGACTGGAAGCCAGTCTT	24444.23	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=5.952;DP=687;FS=7.094;HRun=0;HaplotypeScore=314.6564;InbreedingCoeff=0.9988;MQ=63.34;MQ0=2;MQRankSum=-16.523;QD=135.80;ReadPosRankSum=-3.371;VQSLOD=3.2262;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,9:42:87.23:5368,87,0	0/0:7,0:7:21.07:0,21,961	0/0:29,0:24:72.25:0,72,3213	0/0:24,0:21:60.17:0,60,2369	1/1:10,2:13:33.11:2063,33,0	0/0:19,0:19:54.19:0,54,2713	0/0:32,0:32:90.31:0,90,4147	1/1:41,0:40:95.69:5358,96,0	0/0:22,0:22:63.22:0,63,2820	0/0:20,0:20:51.16:0,51,2262	0/0:12,0:12:33.11:0,33,1510	0/0:30,0:30:87.27:0,87,3950	0/0:30,0:30:81.28:0,81,4143	0/0:20,0:20:57.20:0,57,2772	0/0:34,0:34:99:0,102,5092	0/0:40,0:40:99:0,111,5607	1/1:15,6:25:63.17:4372,63,0	1/1:14,3:23:33.11:2215,33,0	0/0:14,0:14:42.14:0,42,2011	0/0:10,0:10:27.09:0,27,1421	0/0:42,0:42:99:0,117,5484	0/0:22,0:22:60.21:0,60,2997	1/1:10,4:14:39.12:2568,39,0	1/1:12,7:20:33.09:2500,33,0	0/0:28,0:28:69.22:0,69,3500	0/0:33,0:33:87.30:0,87,4116	0/0:27,0:27:75.26:0,75,3759	0/0:12,0:12:33.11:0,33,1521
chr10	70235378	.	AGCACACTC	A	896.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.976;DP=498;FS=15.298;HRun=0;HaplotypeScore=141.0956;InbreedingCoeff=0.9168;MQ=72.63;MQ0=9;MQRankSum=2.510;QD=40.77;ReadPosRankSum=-2.485;VQSLOD=2.0568;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:12.90:0,13,235	0/0:5,0:5:15.04:0,15,318	0/0:31,0:15:44.86:0,45,540	0/0:38,0:22:61.67:0,62,749	0/0:13,0:13:35.93:0,36,866	0/0:14,0:14:39.11:0,39,616	0/0:28,0:28:80.91:0,81,1744	1/1:0,22:22:66.18:992,66,0	0/0:10,0:10:30.09:0,30,1011	0/0:12,0:11:29.86:0,30,977	0/0:16,0:16:39.12:0,39,1074	0/0:14,0:14:42.12:0,42,1023	0/0:15,0:15:45.14:0,45,1372	0/0:10,0:10:30.09:0,30,806	0/0:28,0:28:78.27:0,78,2279	0/0:21,0:21:60.17:0,60,1810	0/0:24,0:24:57.05:0,57,959	0/0:15,0:14:42.03:0,42,669	0/0:16,0:16:45.13:0,45,943	0/0:8,0:7:17.89:0,18,457	0/0:45,0:44:82.91:0,83,3698	0/0:12,0:12:36.10:0,36,981	0/0:11,0:10:22.86:0,23,397	0/0:25,0:25:25.62:0,26,738	0/0:16,0:16:39.13:0,39,1011	0/0:17,0:16:48.14:0,48,1071	0/0:7,0:7:21.03:0,21,519	0/0:4,0:4:12.04:0,12,525
chr10	70235385	.	TCACA	T	324.04	PASS	AB=0.832;AC=7;AF=0.130;AN=54;BaseQRankSum=1.959;DP=535;FS=5.488;HRun=0;HaplotypeScore=120.8077;InbreedingCoeff=0.1565;MQ=62.76;MQ0=13;MQRankSum=-0.356;QD=3.52;ReadPosRankSum=1.192;VQSLOD=1.5919;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:4.23:0,4,25	0/1:4,5:9:12.97:41,0,13	0/0:27,0:11:1.25:0,1,3	./.	0/0:14,0:14:14.05:0,14,144	1/1:8,9:17:11.92:188,12,0	0/0:27,0:27:18.04:0,18,424	0/0:23,0:22:0.89:0,1,2	0/0:14,0:14:35.83:0,36,664	0/0:13,0:12:18.03:0,18,322	0/0:15,0:16:23.80:0,24,433	0/1:12,1:14:31.77:32,0,231	0/1:17,1:18:13.67:14,0,577	0/0:14,0:14:21.02:0,21,353	0/0:29,0:31:41.86:0,42,886	0/0:19,0:21:38.19:0,38,675	0/0:27,0:29:20.23:0,20,236	0/1:11,3:13:33.10:157,0,33	0/0:16,0:15:12.46:0,12,190	0/0:8,0:7:6.02:0,6,142	0/0:48,0:49:78.16:0,78,1673	0/0:14,0:16:26.76:0,27,410	0/0:13,0:12:2.80:0,3,23	0/0:23,0:26:14.57:0,15,232	0/1:17,1:19:20.40:20,0,415	0/0:14,0:14:20.64:0,21,313	0/0:4,0:4:9.03:0,9,195	0/0:6,0:6:18.03:0,18,316
chr10	70235425	.	AAATG	A	590.99	PASS	AB=0.964;AC=8;AF=0.143;AN=56;BaseQRankSum=3.640;DP=546;FS=0.000;HRun=0;HaplotypeScore=115.0838;InbreedingCoeff=0.1221;MQ=46.35;MQ0=31;MQRankSum=-3.663;QD=5.05;ReadPosRankSum=-1.983;VQSLOD=1.6326;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,2:21:23.81:0,24,165	0/0:7,0:7:15.05:0,15,259	0/0:32,0:4:12.02:0,12,231	0/0:50,1:5:14.26:0,14,279	0/1:13,1:12:73.85:74,0,79	0/1:21,0:21:20.64:21,0,693	0/0:24,0:24:68.32:0,68,1627	1/1:5,9:9:27.08:496,27,0	0/0:17,1:17:47.73:0,48,1043	0/0:16,0:15:44.63:0,45,985	0/0:11,0:11:30.10:0,30,740	0/1:15,1:15:2.90:3,0,905	0/0:19,0:18:42.69:0,43,933	0/0:15,0:15:41.42:0,41,888	0/0:24,0:24:67.40:0,67,1470	0/0:22,0:22:42.59:0,43,1398	0/1:25,1:26:58.80:59,0,81	0/0:6,2:7:10.78:0,11,104	0/0:14,0:12:33.11:0,33,732	0/0:13,0:13:30.98:0,31,670	0/0:65,0:63:74.54:0,75,2933	0/0:19,0:19:34.72:0,35,698	0/1:8,0:8:35.94:36,0,47	0/1:17,1:18:30.17:40,0,30	0/0:14,0:14:37.37:0,37,928	0/0:16,0:15:7.36:0,7,768	0/0:7,0:6:15.05:0,15,288	0/0:11,0:10:26.68:0,27,648
chr10	70235429	.	GCACA	G	1211.45	PASS	AB=0.800;AC=11;AF=0.196;AN=56;BaseQRankSum=8.678;DP=546;FS=19.669;HRun=0;HaplotypeScore=112.8387;InbreedingCoeff=0.8288;MQ=47.41;MQ0=31;MQRankSum=-8.246;QD=13.61;ReadPosRankSum=-4.083;VQSLOD=0.8667;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,9:20:27.32:308,27,0	0/0:7,0:7:15.05:0,15,261	0/0:34,0:5:12.04:0,12,227	0/0:56,0:8:20.35:0,20,424	1/1:9,4:11:15.43:100,15,0	0/0:22,0:22:48.48:0,48,1047	0/0:25,0:26:72:0,72,1594	0/0:16,0:10:4.68:0,5,96	0/0:16,0:15:36.11:0,36,823	0/0:16,0:15:38.26:0,38,854	0/0:11,0:11:27.07:0,27,574	0/0:15,0:14:39.13:0,39,892	0/0:16,0:15:36.12:0,36,833	0/0:14,0:14:33.11:0,33,841	0/0:23,0:23:57.16:0,57,1170	0/0:24,0:24:65.61:0,66,1424	1/1:6,17:23:15.28:495,15,0	0/1:6,2:7:23.44:68,0,23	0/0:18,0:16:36.12:0,36,819	0/0:13,0:13:30.10:0,30,626	0/0:63,0:61:99:0,132,2907	0/0:18,0:19:27.05:0,27,599	1/1:2,6:8:12.79:184,13,0	1/1:10,6:16:17.76:230,18,0	0/0:12,0:12:33.11:0,33,839	0/0:18,0:16:42.08:0,42,948	0/0:5,0:6:11.83:0,12,241	0/0:12,0:11:24.08:0,24,600
chr10	70235464	.	TAC	T	633.65	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=6.281;DP=454;FS=11.090;HRun=0;HaplotypeScore=82.0876;InbreedingCoeff=0.8586;MQ=56.16;MQ0=10;MQRankSum=-6.412;QD=8.34;ReadPosRankSum=-0.054;VQSLOD=2.2945;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:18:21.03:254,21,0	./.	0/0:27,0:13:5.28:0,5,338	0/0:42,0:19:27.39:0,27,394	1/1:2,8:10:2.94:39,3,0	0/0:25,0:25:57.19:0,57,946	0/0:28,0:28:66.22:0,66,1053	0/0:15,0:14:28.62:0,29,266	0/0:11,0:10:18.06:0,18,297	0/0:14,0:14:33.11:0,33,520	0/0:11,0:11:27.55:0,28,412	0/0:14,0:14:36.11:0,36,573	0/0:13,0:13:27.08:0,27,421	0/0:12,0:12:33.11:0,33,527	0/0:20,0:20:42.13:0,42,637	0/0:22,0:22:48.16:0,48,799	1/1:12,8:20:14.85:194,15,0	1/1:5,0:5:2.99:28,3,0	0/0:13,0:11:27.08:0,27,361	0/0:10,0:10:15.05:0,15,243	0/0:43,0:41:70.47:0,70,943	0/0:13,0:13:33.11:0,33,516	1/1:1,4:5:9.02:105,9,0	1/1:8,10:18:15.02:178,15,0	0/0:12,0:12:15.05:0,15,238	0/0:14,0:14:29.94:0,30,383	0/0:5,0:5:12.02:0,12,154	0/0:9,0:9:12.04:0,12,177
chr10	70235472	.	CACG	C	231.57	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=7.020;DP=413;FS=1.659;HRun=0;HaplotypeScore=81.3409;InbreedingCoeff=0.5664;MQ=66.60;MQ0=7;MQRankSum=-4.019;QD=3.74;ReadPosRankSum=1.538;VQSLOD=1.9134;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:9.09:62,0,9	0/0:2,0:2:2.97:0,3,20	0/0:27,0:16:41.69:0,42,524	0/0:34,0:21:21.63:0,22,628	0/1:10,0:10:0.19:0,0,30	0/0:25,0:25:63.67:0,64,1302	0/0:27,0:27:81.19:0,81,1569	0/0:14,0:13:26.66:0,27,354	0/0:8,0:8:24.05:0,24,419	0/0:15,0:15:39.11:0,39,629	0/0:9,0:9:27.07:0,27,509	0/0:17,0:17:45.09:0,45,859	0/0:13,0:13:33.08:0,33,616	0/0:14,0:14:42.12:0,42,784	0/0:17,0:17:48.16:0,48,886	0/0:21,0:21:63.13:0,63,1157	0/1:12,0:12:6.12:43,0,6	1/1:1,3:4:3:56,3,0	0/0:11,0:10:29.93:0,30,460	0/0:9,0:9:15.05:0,15,266	0/0:44,0:42:78.84:0,79,1145	0/0:13,0:13:36.10:0,36,698	1/1:5,0:5:7.83:71,8,0	1/1:14,1:15:12.64:136,13,0	0/0:8,0:8:21.06:0,21,380	0/0:13,0:13:32.82:0,33,433	0/0:4,0:4:12.02:0,12,167	0/0:5,0:5:14.79:0,15,202
chr10	70235474	.	C	CG	709.34	PASS	AB=0.991;AC=15;AF=0.268;AN=56;BaseQRankSum=1.120;DP=464;FS=11.423;HRun=9;HaplotypeScore=108.2307;InbreedingCoeff=0.5178;MQ=68.68;MQ0=4;MQRankSum=-2.566;QD=4.79;ReadPosRankSum=-4.044;VQSLOD=-0.4387;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:13.63:0,14,78	1/1:4,2:6:8.47:58,8,0	0/0:23,0:17:4.78:0,5,171	0/1:35,0:25:4.25:4,0,219	0/0:10,0:10:5.90:0,6,42	0/0:22,0:22:41.94:0,42,364	0/0:28,0:29:52.93:0,53,443	0/0:8,0:11:7.97:0,8,24	0/1:9,0:9:13.30:13,0,59	0/0:13,0:14:14.02:0,14,110	0/0:11,0:11:11.96:0,12,104	0/0:22,0:22:7.70:0,8,235	0/0:21,0:21:1.11:0,1,136	0/0:19,0:19:23.92:0,24,208	0/0:22,0:22:26.89:0,27,227	0/0:23,0:23:32.92:0,33,286	0/1:12,0:12:5.41:5,0,49	0/0:3,0:3:2.22:0,2,7	1/1:7,6:13:20.27:206,20,0	0/0:12,1:13:2.97:0,3,25	1/1:17,28:43:16.06:397,16,0	0/0:12,0:13:26.01:0,26,214	0/0:8,0:8:2.90:0,3,16	0/0:15,0:15:8:0,8,39	0/0:19,0:19:14.91:0,15,130	1/1:12,3:15:8.94:73,9,0	1/1:3,3:6:5.96:53,6,0	1/1:3,3:6:6.02:66,6,0
chr10	70235957	.	TACACACACAC	T	360.50	PASS	AB=0.830;AC=8;AF=0.167;AN=48;BaseQRankSum=3.547;DP=564;FS=3.957;HRun=0;HaplotypeScore=157.8326;InbreedingCoeff=0.2194;MQ=72.07;MQ0=10;MQRankSum=-1.538;QD=2.95;ReadPosRankSum=0.982;VQSLOD=2.7349;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:32.84:44,0,33	1/1:5,0:5:4.57:74,5,0	./.	./.	./.	0/0:18,0:18:12.04:0,12,508	0/0:34,0:35:27.05:0,27,752	0/0:23,0:22:8.99:0,9,118	0/0:18,0:20:26.74:0,27,867	0/0:12,0:12:15.05:0,15,592	0/0:6,0:11:3.01:0,3,131	0/0:16,0:15:15.05:0,15,457	0/0:18,0:17:18.06:0,18,586	0/0:20,0:19:9.03:0,9,234	0/0:22,0:27:24.07:0,24,713	0/0:19,0:19:21.07:0,21,975	1/1:22,6:27:6.02:158,6,0	0/0:12,0:20:21.07:0,21,653	0/0:14,0:12:7.41:0,7,73	0/1:4,0:8:11:22,0,11	0/0:35,0:34:6.66:0,7,182	0/0:14,0:14:18.53:0,19,734	./.	0/1:19,4:24:95.75:165,0,96	0/0:20,0:20:9.03:0,9,240	0/0:15,0:16:5.60:0,6,37	0/1:15,0:19:7.30:23,0,7	0/0:1,0:1:3.01:0,3,38
chr10	70236501	.	G	GC	1273.16	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.438;DP=786;FS=2.270;HRun=1;HaplotypeScore=75.4242;InbreedingCoeff=0.9702;MQ=80.65;MQ0=0;MQRankSum=-1.661;QD=38.58;ReadPosRankSum=-4.709;VQSLOD=2.2748;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,178,2264	0/0:14,0:14:39.10:0,39,488	0/0:20,0:20:55.42:0,55,700	0/0:19,0:19:51.16:0,51,653	0/0:32,0:32:90.27:0,90,1140	0/0:19,0:19:54.18:0,54,701	0/0:32,0:32:93.30:0,93,1207	1/1:1,32:33:96.20:1368,96,0	0/0:30,0:30:90.28:0,90,1154	0/0:30,0:30:87.28:0,87,1130	0/0:25,0:25:75.24:0,75,966	0/0:22,0:22:66.20:0,66,843	0/0:28,0:28:84.27:0,84,1090	0/0:32,0:32:93.30:0,93,1206	0/0:47,0:47:99:0,138,1792	0/0:34,0:34:99:0,99,1278	0/0:36,0:36:99:0,105,1363	0/0:38,0:38:99:0,114,1464	0/0:17,0:17:48.16:0,48,623	0/0:22,0:22:60.19:0,60,779	0/0:47,0:47:99:0,141,1814	0/0:20,0:20:60.19:0,60,775	0/0:22,0:22:63.20:0,63,818	0/0:28,0:28:81.25:0,81,1036	0/0:24,0:24:72.23:0,72,935	0/0:24,0:24:72.23:0,72,923	0/0:26,0:26:78.15:0,78,988	0/0:4,0:4:12.04:0,12,156
chr10	70238811	.	A	AAGAAAG	2658.01	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.220;DP=721;FS=2.288;HRun=0;HaplotypeScore=177.5857;InbreedingCoeff=0.9992;MQ=80.47;MQ0=0;MQRankSum=-8.349;QD=80.55;ReadPosRankSum=-4.252;VQSLOD=3.5364;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,163,3689	0/0:11,0:11:33.11:0,33,793	0/0:23,0:23:54.36:0,54,1218	0/0:26,0:26:66.18:0,66,1358	0/0:24,0:24:69.24:0,69,1659	0/0:23,0:23:66.21:0,66,1539	0/0:18,0:18:51.17:0,51,1221	1/1:17,16:33:90.23:2753,90,0	0/0:21,0:21:63.22:0,63,1486	0/0:25,0:25:75.26:0,75,1738	0/0:19,0:19:51.16:0,51,1179	0/0:29,0:29:87.30:0,87,2036	0/0:28,0:28:81.28:0,81,1902	0/0:28,0:28:84.26:0,84,1881	0/0:36,0:36:99:0,105,2382	0/0:26,0:26:78.27:0,78,1818	0/0:33,0:33:80.06:0,80,2288	0/0:24,0:24:66.20:0,66,1538	0/0:21,0:21:57.18:0,57,1299	0/0:25,0:25:72.25:0,72,1695	0/0:29,0:29:87.30:0,87,2009	0/0:25,0:25:74.84:0,75,1739	0/0:24,0:24:63.22:0,63,1514	0/0:15,0:15:45.15:0,45,1074	0/0:23,0:23:69.21:0,69,1553	0/0:28,0:28:84.29:0,84,1997	0/0:34,0:34:99:0,102,2418	0/0:13,0:13:30.10:0,30,719
chr10	70238834	.	CT	C	6166.90	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.259;DP=703;FS=1.869;HRun=4;HaplotypeScore=77.7314;InbreedingCoeff=0.9997;MQ=82.72;MQ0=0;MQRankSum=-0.667;QD=30.38;ReadPosRankSum=4.685;VQSLOD=5.0787;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,60:63:99:1691,141,0	0/0:10,0:10:30.09:0,30,398	0/0:18,0:18:48.10:0,48,608	0/0:24,0:24:62.37:0,62,811	1/1:0,19:19:54.16:646,54,0	0/0:23,0:23:69.21:0,69,928	0/0:22,0:22:66.21:0,66,905	1/1:1,18:19:48.15:573,48,0	0/0:21,0:21:63.20:0,63,863	0/0:27,0:27:75.25:0,75,1036	0/0:14,0:14:42.11:0,42,542	0/0:33,0:33:96.30:0,96,1309	0/0:27,0:27:81.20:0,81,1077	0/0:32,0:32:96.32:0,96,1344	0/0:35,0:35:99:0,102,1427	0/0:27,0:27:78.23:0,78,1057	1/1:1,36:37:99:1169,99,0	1/1:0,27:27:72.22:864,72,0	0/0:22,0:22:51.15:0,51,683	0/0:22,0:22:60.19:0,60,824	0/0:28,0:28:84.26:0,84,1142	0/0:21,0:21:63.20:0,63,865	1/1:0,20:20:54.17:647,54,0	1/1:0,18:18:48.15:576,48,0	0/0:23,0:23:60.20:0,60,840	0/0:26,0:26:72.20:0,72,931	0/0:34,0:34:96.31:0,96,1329	0/0:11,0:11:27.09:0,27,378
chr10	70239140	.	TCTCCTC	T	6675.33	PASS	AB=0.787;AC=23;AF=0.411;AN=56;BaseQRankSum=11.916;DP=674;FS=2.940;HRun=0;HaplotypeScore=154.1235;InbreedingCoeff=0.7365;MQ=62.15;MQ0=2;MQRankSum=-10.786;QD=22.33;ReadPosRankSum=-1.727;VQSLOD=3.9484;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,20:42:23.48:748,23,0	0/0:3,0:10:24.08:0,24,609	0/0:33,0:24:17.33:0,17,357	0/0:23,0:19:23.09:0,23,434	1/1:3,23:26:45.08:869,45,0	0/0:11,0:11:27.09:0,27,900	0/0:34,0:33:69.24:0,69,2109	0/1:20,0:20:52.82:102,0,53	0/0:20,0:20:44.89:0,45,1372	0/0:27,0:27:61.09:0,61,1902	0/0:21,0:21:54.19:0,54,1673	0/0:42,0:42:93.25:0,93,2810	0/0:36,0:34:84.29:0,84,2603	0/0:20,0:19:54.16:0,54,1657	0/0:20,0:20:54.17:0,54,1658	0/0:31,0:31:72.20:0,72,2255	0/1:12,7:19:56.23:350,0,56	1/1:7,2:9:8.99:148,9,0	1/1:16,12:27:36.11:648,36,0	1/1:11,8:19:21.07:432,21,0	1/1:15,20:36:30.48:488,30,0	0/0:19,0:19:51.18:0,51,1617	1/1:8,15:23:44.90:811,45,0	1/1:6,10:16:11.99:211,12,0	0/0:27,0:26:60.21:0,60,1889	0/1:15,21:36:33.20:1167,0,33	1/1:3,12:14:30.10:639,30,0	1/1:6,3:9:3.01:64,3,0
chr10	70239257	.	T	TC	479.93	PASS	AB=0.660;AC=1;AF=0.018;AN=56;BaseQRankSum=0.678;DP=745;FS=14.057;HRun=2;HaplotypeScore=79.0430;InbreedingCoeff=-0.0246;MQ=73.91;MQ0=5;MQRankSum=-5.454;QD=15.48;ReadPosRankSum=-2.826;VQSLOD=1.7774;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,1642	0/0:7,0:7:21.03:0,21,242	0/0:43,0:25:63.74:0,64,693	0/0:53,0:33:78:0,78,879	0/0:17,0:17:51.17:0,51,661	0/0:23,0:23:66.15:0,66,834	0/0:25,0:25:75.23:0,75,959	0/1:15,16:30:99:554,0,101	0/0:21,0:21:63.20:0,63,818	0/0:27,0:26:81.26:0,81,1052	0/0:30,0:29:87.28:0,87,1127	0/0:29,0:29:87.28:0,87,1128	0/0:35,0:35:99:0,105,1362	0/0:21,0:21:57.18:0,57,738	0/0:22,0:22:63.20:0,63,818	0/0:34,0:34:96.28:0,96,1217	0/0:27,0:27:81.25:0,81,1037	0/0:22,0:22:66.20:0,66,840	0/0:20,0:20:56.91:0,57,690	0/0:24,0:24:69.22:0,69,895	0/0:26,0:26:75.20:0,75,954	0/0:16,0:16:48.16:0,48,622	0/0:23,0:23:69.19:0,69,867	0/0:29,0:29:84.27:0,84,1090	0/0:30,0:30:90.28:0,90,1141	0/0:31,0:31:90.27:0,90,1135	0/0:32,0:32:93.30:0,93,1206	0/0:3,0:3:2.99:0,3,73
chr10	70239436	.	ACG	A	140.06	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.135;DP=585;FS=1.232;HRun=0;HaplotypeScore=91.2283;InbreedingCoeff=0.9892;MQ=76.37;MQ0=0;MQRankSum=-1.795;QD=14.01;ReadPosRankSum=-2.510;VQSLOD=2.7802;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.07:0,39,682	0/0:13,0:13:33.08:0,33,442	0/0:20,0:19:25.51:0,26,675	0/0:19,0:19:50.09:0,50,742	0/0:30,0:30:78.01:0,78,1132	0/0:32,0:32:96.23:0,96,1814	0/0:29,0:29:81.26:0,81,1594	1/1:4,6:10:21.01:232,21,0	0/0:27,0:27:81.22:0,81,1462	0/0:25,0:25:72.16:0,72,1204	0/0:19,0:19:54.15:0,54,1007	0/0:29,0:29:87.07:0,87,1363	0/0:20,0:20:60.15:0,60,1101	0/0:14,0:14:41.83:0,42,729	0/0:27,0:27:81.18:0,81,1505	0/0:18,0:18:54.06:0,54,920	0/0:28,0:28:84.26:0,84,1578	0/0:18,0:18:54.07:0,54,581	0/0:9,0:9:24.04:0,24,288	0/0:25,0:25:72.04:0,72,805	0/0:11,0:11:30.02:0,30,351	0/0:32,0:32:96.16:0,96,1684	0/0:21,0:21:57.09:0,57,909	0/0:24,0:24:72.21:0,72,1295	0/0:24,0:24:72.20:0,72,1366	0/0:17,0:17:25.26:0,25,388	0/0:20,0:19:32.20:0,32,513	0/0:11,0:11:30.03:0,30,351
chr10	70239437	.	C	CG	1041.11	PASS	AB=0.926;AC=16;AF=0.286;AN=56;BaseQRankSum=5.323;DP=608;FS=10.403;HRun=9;HaplotypeScore=99.1873;InbreedingCoeff=0.7561;MQ=74.33;MQ0=0;MQRankSum=-1.603;QD=6.51;ReadPosRankSum=-2.945;VQSLOD=0.2462;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:23.71:0,24,103	1/1:3,11:14:2.43:228,2,0	0/1:17,0:17:24.83:25,0,176	0/0:18,0:19:15.50:0,16,293	0/0:30,0:30:43.70:0,44,216	0/0:33,0:34:85.99:0,86,735	0/0:29,0:29:77.97:0,78,674	0/0:10,0:10:14.66:0,15,52	0/0:27,0:27:62.94:0,63,544	0/0:25,0:25:50.98:0,51,442	0/0:19,0:19:47.98:0,48,416	0/0:29,0:29:53.93:0,54,469	0/0:20,0:20:50.97:0,51,442	0/0:12,1:14:4.85:0,5,259	0/0:26,0:26:71.93:0,72,614	0/1:17,2:19:24.38:24,0,268	0/0:30,0:30:72.33:0,72,325	0/0:19,0:19:28.30:0,28,83	1/1:5,2:12:17.52:124,18,0	1/1:13,2:29:36.93:200,37,0	1/1:6,0:15:20.15:111,20,0	0/0:32,0:32:77.80:0,78,657	0/0:22,0:22:11.04:0,11,139	0/0:25,0:25:53.87:0,54,236	0/0:25,0:25:63.81:0,64,541	1/1:8,7:19:23.81:206,24,0	1/1:6,1:21:36.14:216,36,0	1/1:3,0:12:19.89:99,20,0
chr10	70239447	.	A	AG	464.65	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=1.133;DP=592;FS=2.771;HRun=9;HaplotypeScore=82.7178;InbreedingCoeff=0.6286;MQ=76.65;MQ0=0;MQRankSum=-0.977;QD=12.91;ReadPosRankSum=-4.536;VQSLOD=2.6950;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:29.74:0,30,179	0/0:13,0:13:34.23:0,34,262	0/1:18,0:17:15.16:15,0,364	0/0:22,0:22:56.76:0,57,699	0/0:29,0:29:27.23:0,27,272	0/0:33,0:33:99:0,99,1341	0/0:30,0:30:90.29:0,90,1237	1/1:3,15:18:37.47:554,37,0	0/0:26,0:26:75.22:0,75,1011	0/0:23,0:23:66.21:0,66,898	0/0:19,0:19:57.19:0,57,790	0/0:25,0:25:75.25:0,75,1042	0/0:19,0:19:57.19:0,57,790	0/0:14,0:14:41.50:0,42,550	0/0:28,0:28:84.22:0,84,1115	0/0:15,0:15:42.56:0,43,548	0/0:30,0:30:79.02:0,79,449	0/0:17,0:17:25.66:0,26,68	0/0:13,0:13:10.70:0,11,309	0/0:22,0:22:41.27:0,41,438	0/0:16,0:16:18.19:0,18,323	0/0:30,0:30:90.21:0,90,1215	0/0:19,0:19:42.55:0,43,242	0/0:23,0:23:58.63:0,59,326	0/0:27,0:27:78.21:0,78,1045	0/0:16,0:16:26.01:0,26,409	0/0:24,0:23:32.13:0,32,406	0/0:10,0:10:20.89:0,21,155
chr10	70239722	.	G	GA	438.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.156;DP=688;FS=8.473;HRun=0;HaplotypeScore=96.1336;InbreedingCoeff=0.9832;MQ=78.60;MQ0=0;MQRankSum=-0.666;QD=16.88;ReadPosRankSum=-3.522;VQSLOD=4.7755;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,128,776	0/0:12,0:12:36.09:0,36,477	0/0:29,0:29:79.51:0,80,1078	0/0:8,0:8:14.92:0,15,183	0/0:28,0:28:72.50:0,72,494	0/0:29,0:29:87.29:0,87,1213	0/0:28,0:28:81.25:0,81,1114	1/1:8,18:26:42.10:534,42,0	0/0:20,0:20:60.20:0,60,839	0/0:31,0:31:91.14:0,91,1192	0/0:17,0:17:51.14:0,51,682	0/0:22,0:22:66.22:0,66,923	0/0:25,0:25:75.24:0,75,1032	0/0:27,0:27:81.26:0,81,1113	0/0:32,0:32:90.30:0,90,1254	0/0:19,0:19:57.18:0,57,777	0/0:25,0:25:62.64:0,63,433	0/0:20,0:20:50.76:0,51,296	0/0:14,0:14:40.87:0,41,341	0/0:31,0:31:84.21:0,84,540	0/0:15,0:15:38.17:0,38,275	0/0:28,0:28:81.27:0,81,1126	0/0:29,0:29:76:0,76,480	0/0:18,0:18:53.14:0,53,396	0/0:29,0:29:87.26:0,87,1180	0/0:31,0:31:89.84:0,90,651	0/0:37,0:37:99:0,102,711	0/0:10,0:10:29.29:0,29,235
chr10	70239723	.	G	GT	8296.84	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-11.760;DP=688;FS=1.304;HRun=9;HaplotypeScore=69.7104;InbreedingCoeff=0.9972;MQ=78.61;MQ0=0;MQRankSum=-1.309;QD=26.09;ReadPosRankSum=2.677;VQSLOD=5.3904;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,46:48:99:1394,126,0	0/0:11,0:12:26.02:0,26,214	0/0:29,0:29:49.23:0,49,524	0/0:8,0:8:17.70:0,18,132	1/1:4,24:28:72.07:759,72,0	0/0:28,0:29:76.99:0,77,652	0/0:28,0:28:80.93:0,81,690	1/1:27,0:27:54.12:579,54,0	0/0:20,0:20:59.99:0,60,521	0/0:29,0:29:52.08:0,52,637	0/0:16,0:16:38.99:0,39,338	0/0:22,0:22:62.99:0,63,547	0/0:24,0:24:68.97:0,69,595	0/0:26,0:26:71.98:0,72,624	0/0:32,0:32:86.93:0,87,747	0/0:18,0:18:50.99:0,51,443	1/1:3,23:26:57.15:630,57,0	0/0:21,0:21:53.93:0,54,454	1/1:3,10:14:35.93:374,36,0	1/1:1,31:32:61.02:850,61,0	1/1:2,13:15:33.09:365,33,0	0/0:28,0:28:65.95:0,66,567	1/1:2,27:29:75.20:830,75,0	1/1:5,14:19:24.57:444,25,0	0/0:28,0:28:71.96:0,72,620	1/1:4,29:34:64.02:902,64,0	1/1:5,29:36:92.89:973,93,0	1/1:4,6:10:18.05:199,18,0
chr10	70240620	.	C	CTT	6991.65	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=2.033;DP=646;FS=13.230;HRun=8;HaplotypeScore=81.5633;InbreedingCoeff=0.9903;MQ=69.79;MQ0=1;MQRankSum=-0.442;QD=21.99;ReadPosRankSum=-0.195;VQSLOD=2.2931;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:36:96.33:1523,96,0	1/1:3,11:14:30.10:476,30,0	0/0:11,0:9:9:0,9,100	0/0:15,0:13:17.82:0,18,172	1/1:2,29:31:90.26:1396,90,0	0/0:25,0:25:75.20:0,75,836	0/0:31,0:31:84.19:0,84,926	1/1:6,0:38:79.08:281,79,0	0/0:24,0:24:66.16:0,66,726	0/0:32,0:32:87.21:0,87,961	0/0:17,0:17:48.12:0,48,535	0/0:20,0:20:54.13:0,54,602	0/0:29,0:29:87.24:0,87,970	0/0:21,0:21:60.15:0,60,669	0/0:23,0:23:54.10:0,54,602	0/0:29,0:29:78.18:0,78,869	1/1:3,29:33:75.26:1184,75,0	1/1:1,0:14:32.85:119,33,0	1/1:3,0:21:46.04:189,46,0	1/1:4,0:24:40.27:148,40,0	1/1:2,0:21:39.93:137,40,0	0/0:22,0:22:51.11:0,51,568	1/1:4,10:15:33.07:496,33,0	1/1:5,15:22:47.13:684,47,0	0/0:29,0:29:87.22:0,87,958	1/1:2,0:19:41.90:144,42,0	1/1:4,1:15:27.69:129,28,0	1/1:1,0:15:24.95:86,25,0
chr10	70240825	.	A	AGCAG	1441.76	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.853;DP=737;FS=13.220;HRun=0;HaplotypeScore=131.2216;InbreedingCoeff=0.9843;MQ=81.64;MQ0=0;MQRankSum=-6.438;QD=46.51;ReadPosRankSum=-4.383;VQSLOD=2.0927;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,178,3573	0/0:14,0:14:42.12:0,42,805	0/0:22,0:22:54.93:0,55,927	0/0:21,0:21:63.18:0,63,1158	0/0:31,0:31:93.29:0,93,1837	0/0:18,0:18:54.17:0,54,1073	0/0:27,0:27:81.21:0,81,1477	1/1:15,16:31:92.93:1537,93,0	0/0:19,0:19:57.17:0,57,1118	0/0:42,0:42:99:0,120,2290	0/0:24,0:24:72.21:0,72,1379	0/0:27,0:27:81.26:0,81,1603	0/0:33,0:33:99:0,99,1959	0/0:23,0:23:69.24:0,69,1426	0/0:20,0:20:60.19:0,60,1207	0/0:25,0:25:75.25:0,75,1485	0/0:27,0:27:75.21:0,75,1435	0/0:21,0:21:63.17:0,63,1126	0/0:17,0:17:48.11:0,48,806	0/0:29,0:29:87.29:0,87,1769	0/0:38,0:38:99:0,105,2073	0/0:36,0:36:99:0,108,2094	0/0:24,0:24:72.23:0,72,1470	0/0:32,0:32:96.30:0,96,1917	0/0:19,0:19:54.19:0,54,1116	0/0:26,0:26:78.26:0,78,1600	0/0:26,0:26:78.24:0,78,1526	0/0:5,0:5:15.01:0,15,253
chr10	70240829	.	G	GC	599.65	PASS	AB=0.585;AC=1;AF=0.018;AN=56;BaseQRankSum=7.258;DP=742;FS=0.000;HRun=0;HaplotypeScore=86.3960;InbreedingCoeff=-0.0187;MQ=81.44;MQ0=0;MQRankSum=-7.470;QD=19.34;ReadPosRankSum=-3.433;VQSLOD=4.1563;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,175,2434	0/0:13,0:13:36.12:0,36,503	0/0:22,0:22:58.05:0,58,760	0/0:21,0:21:63.16:0,63,813	0/0:31,0:31:93.30:0,93,1282	0/0:21,0:21:63.20:0,63,864	0/0:26,0:26:78.26:0,78,1088	0/1:9,21:31:99:674,0,157	0/0:20,0:20:60.20:0,60,837	0/0:41,0:41:99:0,123,1718	0/0:26,0:26:72.24:0,72,1007	0/0:29,0:29:84.28:0,84,1172	0/0:34,0:34:99:0,99,1366	0/0:24,0:24:72.23:0,72,990	0/0:20,0:20:60.20:0,60,839	0/0:24,0:24:72.24:0,72,1007	0/0:28,0:28:81.27:0,81,1131	0/0:19,0:19:57.15:0,57,775	0/0:14,0:14:42.12:0,42,567	0/0:30,0:30:87.29:0,87,1215	0/0:37,0:37:99:0,111,1488	0/0:37,0:37:99:0,111,1535	0/0:27,0:27:75.25:0,75,1047	0/0:33,0:33:99:0,99,1364	0/0:20,0:20:60.18:0,60,820	0/0:25,0:25:75.25:0,75,1049	0/0:26,0:26:75.25:0,75,1046	0/0:5,0:5:15.05:0,15,209
chr10	70241144	.	ACCAGTCTTAG	A	1444.35	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.984;DP=776;FS=4.163;HRun=0;HaplotypeScore=277.8044;InbreedingCoeff=0.9448;MQ=86.98;MQ0=0;MQRankSum=-1.599;QD=42.48;ReadPosRankSum=-3.154;VQSLOD=2.7170;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,120,5551	0/0:10,0:10:30.10:0,30,1421	0/0:32,0:32:78.05:0,78,2495	0/0:25,0:25:66.18:0,66,2613	0/0:32,0:32:90.27:0,90,3666	0/0:22,0:22:63.20:0,63,3112	0/0:24,0:24:66.21:0,66,3155	1/1:13,21:34:63.16:1539,63,0	0/0:26,0:26:69.24:0,69,3389	0/0:29,0:29:75.25:0,75,3305	0/0:18,0:18:51.18:0,51,2465	0/0:22,0:22:57.17:0,57,2603	0/0:24,0:24:57.20:0,57,2861	0/0:24,0:24:60.21:0,60,2983	0/0:23,0:23:63.22:0,63,3122	0/0:30,0:30:84.27:0,84,3976	0/0:33,0:32:84.29:0,84,3741	0/0:22,0:22:60.21:0,60,2806	0/0:17,0:17:45.15:0,45,1933	0/0:24,0:24:63.11:0,63,2983	0/0:62,0:62:99:0,166,7742	0/0:38,0:38:90.30:0,90,4244	0/0:27,0:27:63.66:0,64,2617	0/0:44,0:44:99:0,105,4612	0/0:25,0:25:63.22:0,63,3226	0/0:34,0:34:96.32:0,96,4664	0/0:26,0:26:69.22:0,69,3081	0/0:3,0:3:9.03:0,9,357
chr10	70241167	.	TGA	T	7027.98	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.362;DP=775;FS=1.866;HRun=0;HaplotypeScore=124.5472;InbreedingCoeff=0.9963;MQ=81.22;MQ0=0;MQRankSum=-2.446;QD=40.86;ReadPosRankSum=3.766;VQSLOD=6.6421;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,51:51:99:2205,144,0	0/0:11,0:11:33.11:0,33,638	0/0:26,0:26:66.31:0,66,1326	0/0:25,0:25:71.88:0,72,1347	1/1:0,29:29:72.16:1103,72,0	0/0:23,0:23:69.24:0,69,1306	0/0:25,0:25:75.24:0,75,1415	0/0:33,0:33:87.29:0,87,1478	0/0:29,0:29:84.27:0,84,1578	0/0:34,0:34:96.33:0,96,1848	0/0:23,0:23:66.23:0,66,1266	0/0:18,0:18:51.17:0,51,978	0/0:24,0:24:66.23:0,66,1273	0/0:26,0:26:78.24:0,78,1441	0/0:31,0:31:87.30:0,87,1679	0/0:31,0:31:87.30:0,87,1681	1/1:1,30:31:81.28:1239,81,0	0/0:22,0:22:63.22:0,63,1206	0/0:14,0:14:42.13:0,42,774	0/0:29,0:29:87.30:0,87,1681	0/0:58,0:58:99:0,175,3351	0/0:31,0:31:93.32:0,93,1789	1/1:0,25:25:60.20:919,60,0	1/1:1,35:36:99:1562,102,0	0/0:25,0:25:72.25:0,72,1382	0/0:37,0:37:99:0,108,2079	0/0:23,0:22:69.24:0,69,1331	0/0:5,0:5:15.05:0,15,290
chr10	70241691	.	G	GTCC	863.21	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.495;DP=732;FS=3.409;HRun=0;HaplotypeScore=101.8025;InbreedingCoeff=0.9989;MQ=88.62;MQ0=1;MQRankSum=-2.194;QD=47.96;ReadPosRankSum=-0.549;VQSLOD=5.1302;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,1778	0/0:11,0:11:30.10:0,30,490	0/0:26,0:26:57.16:0,57,897	0/0:31,0:30:38.10:0,38,1166	0/0:25,0:25:75.26:0,75,1225	0/0:15,0:15:39.13:0,39,634	0/0:29,0:29:84.27:0,84,1346	0/0:32,0:32:75.26:0,75,1224	0/0:21,0:21:60.20:0,60,977	0/0:24,0:24:69.20:0,69,1067	0/0:13,0:13:36.12:0,36,588	0/0:42,0:42:99:0,123,1983	0/0:25,0:25:72.25:0,72,1176	0/0:35,0:35:99:0,102,1666	0/0:38,0:38:99:0,111,1810	0/0:36,0:36:99:0,102,1666	0/0:19,0:19:54.18:0,54,882	1/1:1,16:18:45.11:958,45,0	0/0:21,0:21:60.05:0,60,921	0/0:16,0:16:45.15:0,45,730	0/0:46,0:46:99:0,123,1981	0/0:20,0:20:54.18:0,54,882	0/0:18,0:18:51.17:0,51,825	0/0:40,0:40:99:0,108,1738	0/0:25,0:25:72.25:0,72,1176	0/0:27,0:27:69.24:0,69,1126	0/0:25,0:25:75.24:0,75,1200	0/0:14,0:14:33.11:0,33,539
chr10	70242182	.	AAAAAAACAAAAAAAAAAAAAAAC	A	5533.29	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=11.248;DP=544;FS=0.476;HRun=0;HaplotypeScore=286.4732;InbreedingCoeff=0.2841;MQ=60.49;MQ0=10;MQRankSum=-6.179;QD=21.53;ReadPosRankSum=5.997;VQSLOD=3.0086;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:83.19:342,0,83	0/1:9,0:9:17.95:18,0,62	0/0:20,0:8:2.77:0,3,198	0/0:18,0:8:2.84:0,3,14	0/1:17,0:17:82.61:108,0,83	0/0:18,0:18:51.17:0,51,3955	0/0:14,0:14:39.12:0,39,2215	0/1:25,0:25:19.80:174,0,20	0/0:23,0:23:57.17:0,57,4421	0/0:35,0:33:84.27:0,84,6094	0/0:25,0:25:65.95:0,66,4667	0/0:18,0:18:39.11:0,39,1877	0/0:20,0:20:48.16:0,48,4181	0/0:16,0:16:33.11:0,33,2291	0/0:25,0:25:72.22:0,72,4572	0/0:18,0:18:36.11:0,36,2733	0/1:24,0:23:38.57:401,0,39	1/1:1,15:15:9.03:550,9,0	0/1:23,0:21:4.42:683,0,4	1/1:29,0:28:29.29:1020,29,0	1/1:13,0:13:3.01:123,3,0	0/0:18,0:17:48.14:0,48,3228	0/1:14,0:14:25.50:204,0,25	1/1:24,0:23:2.61:72,3,0	0/0:19,0:19:51.17:0,51,4045	1/1:16,0:15:25.04:632,25,0	1/1:15,0:15:12.93:492,13,0	0/1:11,0:11:25.76:715,0,26
chr10	70242184	.	AAAAACAAAAAAAAAAAAAAAC	A	8450.58	PASS	AB=0.920;AC=22;AF=0.393;AN=56;BaseQRankSum=12.364;DP=543;FS=2.074;HRun=0;HaplotypeScore=256.3743;InbreedingCoeff=0.4595;MQ=58.87;MQ0=11;MQRankSum=-5.706;QD=32.88;ReadPosRankSum=4.532;VQSLOD=3.6664;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:26.18:478,0,26	0/1:8,0:8:6.95:49,0,7	0/0:19,0:7:16.84:0,17,208	0/0:17,0:6:2.89:0,3,16	0/1:18,0:18:14.53:231,0,15	0/0:19,0:19:54.17:0,54,3659	0/0:13,0:13:39.12:0,39,2061	0/1:22,0:22:57.09:80,0,57	0/0:23,0:23:60.19:0,60,4195	0/0:34,0:32:84.27:0,84,5485	0/0:25,0:25:65.95:0,66,4234	0/0:18,0:18:45.12:0,45,2005	0/0:19,0:19:48.16:0,48,3759	0/0:15,0:15:33.08:0,33,2024	0/0:26,0:26:75.24:0,75,4313	0/0:19,0:19:39.12:0,39,2648	0/1:23,0:22:22.76:570,0,23	1/1:16,0:14:9.03:450,9,0	1/1:4,20:21:60.11:1538,60,0	1/1:3,26:28:44.49:1562,44,0	1/1:1,12:13:3.01:170,3,0	0/0:18,0:17:48.15:0,48,2950	1/1:15,0:15:0.49:272,0,0	1/1:25,0:24:2.84:102,3,0	0/0:21,0:21:57.18:0,57,3876	1/1:2,14:15:42.14:1265,42,0	1/1:4,11:15:12.93:682,13,0	0/1:1,12:13:4.02:1001,0,4
chr10	70242186	.	AAACAAAAAAAAAAAAAAAC	A	8178.45	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=13.231;DP=531;FS=2.518;HRun=0;HaplotypeScore=230.9368;InbreedingCoeff=0.8047;MQ=57.65;MQ0=13;MQRankSum=-4.863;QD=33.11;ReadPosRankSum=3.988;VQSLOD=3.9765;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:22:10.14:739,10,0	1/1:7,0:7:11.97:162,12,0	0/0:21,0:7:14.87:0,15,190	0/0:17,0:5:2.78:0,3,13	1/1:1,15:16:15.80:573,16,0	0/0:19,0:19:57.18:0,57,3332	0/0:13,0:13:39.10:0,39,1807	0/1:22,0:22:20.70:198,0,21	0/0:22,0:22:60.18:0,60,3741	0/0:35,0:33:93.28:0,93,5217	0/0:26,0:26:68.93:0,69,3830	0/0:18,0:18:45.08:0,45,1762	0/0:19,0:18:48.15:0,48,3345	0/0:14,0:14:33.01:0,33,1735	0/0:26,0:26:78.23:0,78,3841	0/0:17,0:17:39.11:0,39,2328	1/1:6,17:22:13.76:869,14,0	1/1:16,0:14:9.03:414,9,0	1/1:24,0:20:43.82:999,44,0	1/1:27,0:26:45.52:1248,46,0	1/1:12,0:12:3.01:140,3,0	0/0:18,0:17:47.31:0,47,2575	1/1:4,10:14:14.84:412,15,0	1/1:1,22:23:5.83:166,6,0	0/0:19,0:19:57.18:0,57,3421	1/1:16,0:15:41.35:879,41,0	1/1:12,0:12:12.93:560,13,0	1/1:13,0:13:1.45:819,1,0
chr10	70242189	.	CA	C	230.15	PASS	AB=0.954;AC=28;AF=0.519;AN=54;BaseQRankSum=8.817;DP=532;FS=0.000;HRun=15;HaplotypeScore=116.5334;InbreedingCoeff=0.3020;MQ=55.43;MQ0=18;MQRankSum=-5.468;QD=0.71;ReadPosRankSum=5.839;VQSLOD=-0.4402;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:13.73:14,0,14	1/1:7,0:7:5.74:29,6,0	0/1:20,0:6:5.31:5,0,28	./.	1/1:16,0:16:0.69:16,1,0	0/1:18,1:20:18.99:19,0,235	0/0:13,1:13:4.53:0,5,146	0/0:25,0:23:21.30:0,21,101	0/0:23,0:22:47.44:0,47,369	0/0:30,3:33:16.72:0,17,443	0/1:23,3:25:59.53:60,0,265	0/0:16,0:16:17.51:0,18,163	0/0:16,2:17:25.25:0,25,320	0/1:12,2:15:10.16:10,0,155	0/0:25,0:25:31.37:0,31,400	0/0:18,0:17:16.44:0,16,253	1/1:21,0:20:1.07:34,1,0	1/1:17,0:15:6.66:20,7,0	0/1:24,0:20:10.21:18,0,10	1/1:27,0:26:17.16:52,17,0	1/1:13,0:12:2.22:7,2,0	0/1:16,1:17:1.40:1,0,195	0/1:13,0:13:6.53:7,0,12	1/1:22,0:21:1.53:4,2,0	0/0:20,0:21:57.71:0,58,452	1/1:16,0:15:15.03:43,15,0	1/1:12,0:12:8.70:25,9,0	1/1:13,0:13:12.60:38,13,0
chr10	70242196	.	A	AC	385.29	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=3.271;DP=542;FS=0.687;HRun=0;HaplotypeScore=117.9775;InbreedingCoeff=0.3030;MQ=52.29;MQ0=23;MQRankSum=-2.694;QD=5.84;ReadPosRankSum=-4.625;VQSLOD=2.7413;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:19.95:0,20,105	0/0:7,0:7:10.61:0,11,61	0/0:21,0:4:9.39:0,9,50	0/0:23,0:7:2.58:0,3,23	0/0:17,0:16:20.52:0,21,126	0/0:18,0:18:51.19:0,51,571	0/0:13,0:12:33.32:0,33,344	1/1:12,13:23:55.76:448,56,0	0/0:22,0:21:52.84:0,53,573	0/0:35,0:33:91.32:0,91,990	0/0:25,0:24:57.92:0,58,712	0/0:14,0:14:31.08:0,31,295	0/0:17,0:16:44.23:0,44,458	0/0:16,0:16:38.56:0,39,315	0/0:23,0:23:57.35:0,57,711	0/0:18,0:17:35.99:0,36,478	0/0:21,0:20:21.61:0,22,119	0/0:17,0:15:7.11:0,7,24	0/1:25,0:20:34.44:34,0,71	0/0:27,0:26:11.92:0,12,58	0/0:13,0:12:2.50:0,2,9	0/0:19,0:18:42.46:0,42,479	0/0:14,0:13:4.93:0,5,49	0/0:23,0:22:5.44:0,5,36	0/0:21,0:21:59.23:0,59,704	0/1:16,0:15:16.59:17,0,50	0/0:13,0:13:12.88:0,13,51	0/0:13,0:13:17.80:0,18,70
chr10	70242223	.	C	CA	857.07	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-3.505;DP=549;FS=5.321;HRun=8;HaplotypeScore=122.0926;InbreedingCoeff=0.3411;MQ=69.02;MQ0=12;MQRankSum=1.828;QD=7.08;ReadPosRankSum=-4.438;VQSLOD=0.4378;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:45.02:0,45,410	0/0:7,0:7:21:0,21,187	0/1:31,0:18:10.20:10,0,210	0/1:27,0:16:7.12:7,0,101	0/0:24,0:24:47.06:0,47,417	0/0:18,0:18:41.66:0,42,361	0/0:12,0:11:24.01:0,24,219	1/1:8,34:41:89.18:941,89,0	0/0:21,0:21:54.03:0,54,493	0/0:29,0:29:69.02:0,69,631	0/0:21,0:20:41.97:0,42,382	0/0:13,0:13:29.98:0,30,270	0/0:20,0:20:54.02:0,54,494	0/0:12,0:12:27.01:0,27,247	0/0:18,0:18:41.95:0,42,374	0/0:17,0:16:39.01:0,39,353	0/0:23,0:22:21:0,21,192	0/0:12,0:11:15.01:0,15,137	0/0:16,0:15:36.01:0,36,329	0/0:25,0:25:56.86:0,57,520	0/0:12,0:11:9:0,9,81	0/0:18,0:18:38.89:0,39,336	0/0:10,0:9:9:0,9,82	0/1:20,0:19:14.78:15,0,71	0/0:28,0:28:71.64:0,72,637	0/0:16,0:16:36.02:0,36,329	0/0:17,0:17:33.01:0,33,300	0/0:10,0:10:23.99:0,24,214
chr10	70243855	.	ATGCACTCACAT	A	10522.31	PASS	AB=0.537;AC=11;AF=0.196;AN=56;BaseQRankSum=15.788;DP=693;FS=10.423;HRun=0;HaplotypeScore=220.5849;InbreedingCoeff=0.8723;MQ=79.22;MQ0=0;MQRankSum=-12.236;QD=65.76;ReadPosRankSum=1.800;VQSLOD=3.6386;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,6635	0/0:14,0:14:42.13:0,42,2106	0/0:19,0:19:42.14:0,42,1975	0/0:16,0:17:46.02:0,46,1734	0/0:27,0:27:75.26:0,75,4091	0/0:25,0:25:72.25:0,72,3340	0/0:23,0:23:63.22:0,63,3324	0/0:33,0:33:90.30:0,90,4667	0/0:23,0:23:69.24:0,69,3795	0/0:32,0:32:93.32:0,93,5211	0/0:25,0:25:75.26:0,75,4044	0/0:31,0:31:90.31:0,90,4986	0/0:29,0:29:87.28:0,87,4367	0/0:18,0:18:48.16:0,48,2517	0/0:24,0:24:72.25:0,72,3779	0/0:23,0:23:63.22:0,63,3419	0/0:18,0:18:51.18:0,51,2859	0/0:15,0:15:39.07:0,39,1724	1/1:4,27:31:78.25:2201,78,0	1/1:1,35:36:81.28:2609,81,0	1/1:4,21:25:21.07:628,21,0	0/0:23,0:23:66.23:0,66,3516	0/0:27,0:27:78.27:0,78,4282	0/0:21,0:21:63.22:0,63,3391	0/0:24,0:24:69.24:0,69,3682	0/1:4,25:29:99:2197,0,217	1/1:3,30:32:75.26:2620,75,0	1/1:1,5:6:9.03:268,9,0
chr10	70244639	.	A	AG	4342.32	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=8.757;DP=657;FS=8.808;HRun=5;HaplotypeScore=113.0511;InbreedingCoeff=0.8055;MQ=80.38;MQ0=1;MQRankSum=-2.281;QD=23.60;ReadPosRankSum=-0.721;VQSLOD=3.1227;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:51.64:668,52,0	1/1:2,10:12:27.09:348,27,0	0/0:45,0:37:48.65:0,49,786	0/0:39,0:33:45.67:0,46,698	1/1:6,26:31:69.68:877,70,0	0/0:30,0:30:84.20:0,84,942	0/0:15,0:15:45.12:0,45,502	1/1:4,28:32:84.59:1007,85,0	0/0:23,0:23:69.17:0,69,765	0/0:33,0:33:96.27:0,96,1080	0/0:31,0:31:93.26:0,93,1051	0/0:20,0:20:57.15:0,57,639	0/0:23,0:23:63.17:0,63,706	0/0:25,0:25:63.16:0,63,704	0/0:26,0:26:69.17:0,69,760	0/0:17,0:17:45.08:0,45,473	1/1:1,14:15:30.10:393,30,0	1/1:1,9:10:24.08:312,24,0	0/0:25,0:25:51.91:0,52,173	0/1:23,0:23:18.06:18,0,118	0/0:16,0:16:0.61:0,1,58	0/0:30,0:30:87.21:0,87,959	1/1:3,12:15:29.93:372,30,0	1/1:2,8:10:21.07:276,21,0	0/0:26,0:26:75.19:0,75,834	0/0:22,0:22:40.47:0,40,148	0/0:26,0:26:36.07:0,36,176	0/1:12,0:12:12.23:71,0,12
chr10	70245096	.	C	CA	4133.57	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.063;DP=642;FS=1.719;HRun=6;HaplotypeScore=62.7591;InbreedingCoeff=0.9853;MQ=74.95;MQ0=0;MQRankSum=0.633;QD=29.53;ReadPosRankSum=2.148;VQSLOD=4.4541;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.15:0,69,704	0/0:16,0:16:45.10:0,45,459	0/0:25,0:25:50.11:0,50,485	0/0:21,0:19:45.07:0,45,447	0/0:19,0:19:45.10:0,45,459	0/0:28,0:28:81.16:0,81,818	0/0:22,0:22:62.93:0,63,625	0/0:37,0:37:99:0,105,1066	0/0:21,0:21:57.13:0,57,581	0/0:33,0:32:81.17:0,81,820	0/0:21,0:21:57.13:0,57,581	0/0:16,0:16:39.08:0,39,398	0/0:23,0:23:63.14:0,63,643	0/0:18,0:18:54.09:0,54,536	0/0:27,0:27:78.18:0,78,796	0/0:16,0:16:42.09:0,42,429	0/0:23,0:23:66.15:0,66,673	0/0:14,0:14:39.07:0,39,391	1/1:4,11:15:42.03:502,42,0	1/1:4,23:27:54.17:679,54,0	1/1:3,18:21:51.16:642,51,0	0/0:23,0:23:66.15:0,66,673	0/0:22,0:22:63.14:0,63,643	0/0:26,0:26:69.12:0,69,694	0/0:27,0:27:72.16:0,72,735	1/1:3,21:24:7.99:731,8,0	1/1:4,32:36:78.25:975,78,0	1/1:1,16:17:48.15:604,48,0
chr10	70245451	.	T	TCCA	2074.38	PASS	AB=0.909;AC=11;AF=0.196;AN=56;BaseQRankSum=17.097;DP=757;FS=0.000;HRun=0;HaplotypeScore=186.6776;InbreedingCoeff=-0.2270;MQ=66.08;MQ0=2;MQRankSum=-14.476;QD=7.36;ReadPosRankSum=-1.278;VQSLOD=2.9791;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:34,6:40:99:408,0,162	0/1:25,0:25:94.34:94,0,487	0/0:27,0:23:63.11:0,63,1023	0/0:18,0:14:42.08:0,42,631	0/1:21,9:30:14.08:391,0,14	0/0:22,0:22:63.19:0,63,1112	0/0:24,0:24:72.22:0,72,1255	0/0:48,0:47:48.45:0,48,1625	0/0:23,0:23:69.24:0,69,1272	0/0:35,0:35:99:0,99,1807	0/0:22,0:22:66.21:0,66,1191	0/0:32,0:32:90.23:0,90,1519	0/0:30,0:30:84.25:0,84,1474	0/0:29,0:29:84.29:0,84,1540	0/0:39,0:39:99:0,117,2109	0/0:34,0:34:99:0,102,1860	0/1:20,3:23:82.40:203,0,82	0/1:6,0:6:0.37:0,0,168	0/0:15,0:15:4.32:0,4,417	0/1:28,0:28:99:109,0,283	0/0:20,0:20:9.86:0,10,174	0/0:30,0:30:90.29:0,90,1598	0/1:18,13:31:99:526,0,109	0/1:19,8:27:36.02:273,0,36	0/0:27,0:27:81.27:0,81,1470	0/1:31,0:31:58.15:58,0,674	0/1:28,0:28:63.02:147,0,63	0/1:13,0:13:4.99:5,0,256
chr10	70245452	.	T	TCATCCATC	17721.24	PASS	AB=0.618;AC=27;AF=0.482;AN=56;BaseQRankSum=1.451;DP=782;FS=3.896;HRun=0;HaplotypeScore=208.4065;InbreedingCoeff=0.8555;MQ=65.15;MQ0=2;MQRankSum=-12.615;QD=45.91;ReadPosRankSum=-4.732;VQSLOD=3.8716;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:40:50.11:1379,50,0	1/1:24,0:24:57.17:1748,57,0	0/0:26,0:22:0.03:0,0,246	0/0:18,0:14:11.92:0,12,139	1/1:22,0:31:48.13:1359,48,0	0/0:24,0:24:48.15:0,48,1027	0/0:25,0:25:48.14:0,48,1012	1/1:50,0:49:69.16:1247,69,0	0/0:23,0:23:63.20:0,63,1414	0/0:36,0:36:81.27:0,81,1909	0/0:22,0:22:54.19:0,54,1275	0/0:30,0:30:69.21:0,69,1490	0/0:30,0:30:78.20:0,78,1599	0/0:29,0:29:69.21:0,69,1515	0/0:40,0:40:96.24:0,96,2129	0/0:35,0:35:87.30:0,87,2092	1/1:20,0:23:26.96:584,27,0	1/1:6,0:6:18.02:396,18,0	1/1:7,10:19:36.08:920,36,0	1/1:6,21:34:54.12:1938,54,0	1/1:5,14:22:3.01:122,3,0	0/0:31,0:31:78.22:0,78,1660	1/1:18,0:31:51.17:1680,51,0	1/1:20,0:28:48.16:1285,48,0	0/0:27,0:27:57.18:0,57,1355	0/1:13,17:34:33.83:1928,0,34	1/1:3,24:31:66.23:2759,66,0	1/1:5,8:13:9.03:377,9,0
chr10	70245471	.	T	TCCA	3814.52	PASS	AB=0.961;AC=14;AF=0.250;AN=56;BaseQRankSum=16.635;DP=757;FS=0.000;HRun=0;HaplotypeScore=165.7967;InbreedingCoeff=-0.3096;MQ=60.04;MQ0=2;MQRankSum=-13.095;QD=10.60;ReadPosRankSum=5.511;VQSLOD=3.0662;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:99:295,0,117	0/1:12,9:21:8.30:467,0,8	0/0:23,0:20:33.24:0,33,752	0/0:14,0:13:38.83:0,39,469	0/1:34,0:34:99:379,0,138	0/0:29,0:29:84.27:0,84,1406	0/0:25,0:25:64.90:0,65,1201	0/1:41,0:40:48.66:49,0,806	0/0:28,0:28:84.29:0,84,1481	0/0:40,0:40:99:0,117,2036	0/0:22,0:22:66.22:0,66,1166	0/0:25,0:25:75.26:0,75,1369	0/0:34,0:34:99:0,99,1706	0/0:27,0:27:81.26:0,81,1442	0/0:37,0:37:99:0,111,1931	0/0:35,0:35:99:0,102,1810	0/1:24,0:24:99:205,0,204	0/1:5,2:7:16.41:101,0,16	0/1:20,0:19:99:104,0,350	0/1:35,1:36:99:411,0,288	0/1:15,0:15:31.10:31,0,79	0/0:32,0:32:93.30:0,93,1609	0/1:26,0:26:68.52:478,0,69	0/1:28,0:28:90.01:266,0,90	0/0:26,0:26:75.25:0,75,1301	0/1:31,0:31:99:366,0,371	0/1:35,0:35:99:586,0,225	0/1:8,0:8:74.53:77,0,75
chr10	70245472	.	T	TCCATC	5137.73	PASS	AB=0.981;AC=15;AF=0.268;AN=56;BaseQRankSum=17.177;DP=755;FS=2.395;HRun=0;HaplotypeScore=188.6269;InbreedingCoeff=-0.1559;MQ=60.09;MQ0=2;MQRankSum=-12.987;QD=14.35;ReadPosRankSum=6.034;VQSLOD=4.1569;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:45.32:572,0,45	1/1:11,9:20:18.16:717,18,0	0/0:23,0:20:56.99:0,57,955	0/0:14,0:13:26.29:0,26,480	0/1:33,0:33:45.38:582,0,45	0/0:30,0:30:87.27:0,87,1723	0/0:24,0:24:72.23:0,72,1499	0/1:40,0:39:9.69:10,0,1303	0/0:28,0:28:84.26:0,84,1715	0/0:41,0:41:99:0,117,2398	0/0:23,0:23:66.21:0,66,1348	0/0:25,0:25:75.24:0,75,1561	0/0:34,0:34:99:0,99,2081	0/0:27,0:27:81.26:0,81,1706	0/0:37,0:37:99:0,108,2256	0/0:35,0:35:99:0,105,2178	0/1:24,0:24:99:325,0,169	0/1:5,2:7:6.56:140,0,7	0/1:21,0:20:82.53:83,0,440	0/1:36,0:37:99:442,0,366	0/1:16,0:16:36.96:37,0,80	0/0:31,0:31:93.29:0,93,1931	0/1:26,0:26:27.05:742,0,27	0/1:28,0:28:26.38:441,0,26	0/0:25,0:25:75.24:0,75,1595	0/1:31,0:31:99:345,0,498	0/1:34,0:34:99:623,0,273	0/1:8,0:8:78.94:79,0,111
chr10	70246017	.	GA	G	882.83	PASS	AB=0.663;AC=1;AF=0.018;AN=56;BaseQRankSum=6.511;DP=973;FS=0.000;HRun=2;HaplotypeScore=177.0721;InbreedingCoeff=-0.0184;MQ=70.88;MQ0=4;MQRankSum=-8.438;QD=16.05;ReadPosRankSum=-3.609;VQSLOD=2.3327;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:37:55.16:0,55,1239	0/0:11,0:11:33.08:0,33,469	0/0:46,1:45:91.84:0,92,1553	0/0:46,1:40:91.57:0,92,1592	0/0:22,0:22:63.20:0,63,923	0/0:22,0:22:66.22:0,66,989	0/0:35,0:35:99:0,105,1549	0/1:27,28:55:99:957,0,190	0/0:37,0:37:99:0,111,1633	0/0:36,0:36:99:0,108,1619	0/0:37,0:37:99:0,108,1581	0/0:48,0:48:99:0,135,1981	0/0:38,0:38:99:0,114,1688	0/0:41,0:41:99:0,123,1807	0/0:48,0:48:99:0,132,1957	0/0:54,0:54:99:0,160,2341	0/0:29,0:29:78.14:0,78,1093	0/0:10,0:10:30.10:0,30,449	0/0:19,0:19:22.61:0,23,639	0/0:36,0:36:96.32:0,96,1420	0/0:63,0:63:99:0,117,1729	0/0:31,0:31:93.30:0,93,1357	0/0:34,0:34:96.24:0,96,1387	0/0:36,0:36:81.22:0,81,1168	0/0:30,0:30:87.27:0,87,1282	0/0:36,0:36:99:0,108,1612	0/0:21,0:20:27.09:0,27,396	0/0:13,0:12:24.08:0,24,360
chr10	70246042	.	A	AACAC	6430.77	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-3.367;DP=1065;FS=3.930;HRun=0;HaplotypeScore=237.8820;InbreedingCoeff=0.6644;MQ=58.84;MQ0=15;MQRankSum=-1.790;QD=20.10;ReadPosRankSum=-4.455;VQSLOD=3.6667;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:28:28.83:29,0,73	0/0:7,0:13:17.27:0,17,167	0/0:64,0:32:8.61:0,9,79	0/0:57,0:29:3.63:0,4,78	0/0:14,0:21:11.25:0,11,166	0/0:23,0:23:57.14:0,57,877	0/0:41,0:43:45.28:0,45,1118	0/1:26,0:38:35.41:35,0,111	0/0:37,0:39:62.80:0,63,1108	0/0:37,0:38:77.36:0,77,1320	0/0:37,0:37:81.21:0,81,1225	0/0:53,0:53:99:0,120,1827	0/0:47,0:48:99:0,117,1706	0/0:40,0:43:99:0,111,1591	0/0:49,0:49:95.94:0,96,1710	0/0:53,0:54:99:0,141,2195	0/0:24,0:29:9.99:0,10,232	0/1:18,0:18:16.51:17,0,52	1/1:7,7:16:31.01:491,31,0	1/1:11,29:43:48.06:1059,48,0	1/1:23,53:85:74.20:1669,74,0	0/0:30,0:30:72.23:0,72,1122	0/0:26,0:34:9.67:0,10,309	0/0:25,0:33:23.38:0,23,203	0/0:35,0:35:82.18:0,82,1304	1/1:11,32:44:68.81:2082,69,0	1/1:3,26:34:36.33:826,36,0	1/1:4,7:10:9.92:224,10,0
chr10	70246060	.	CAT	C	1096.75	PASS	AB=0.976;AC=12;AF=0.214;AN=56;BaseQRankSum=12.187;DP=1080;FS=2.418;HRun=0;HaplotypeScore=227.0631;InbreedingCoeff=0.0936;MQ=54.65;MQ0=17;MQRankSum=-6.162;QD=3.15;ReadPosRankSum=-4.693;VQSLOD=1.8971;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:40:9.63:44,0,10	0/1:15,0:15:8.09:57,0,8	0/0:41,0:8:7.76:0,8,97	0/1:42,0:11:23.70:24,0,64	0/1:26,1:27:0.03:81,0,0	0/0:27,0:27:69.14:0,69,1112	0/0:41,0:40:45.83:0,46,1204	1/1:44,0:42:98.38:567,98,0	0/0:36,0:37:67.74:0,68,1278	0/0:43,0:43:99:0,111,1618	0/0:34,0:34:95.94:0,96,1429	0/0:50,0:50:99:0,131,2141	0/0:54,0:53:99:0,102,1821	0/0:44,0:44:78.39:0,78,1595	0/0:49,0:49:99:0,107,1935	0/0:55,0:55:99:0,133,2395	0/1:29,0:29:26.44:41,0,26	0/1:15,4:19:18.10:172,0,18	0/0:20,0:20:2.67:0,3,356	0/0:44,0:44:76.79:0,77,666	0/0:89,0:88:42.79:0,43,1006	0/0:34,0:34:99:0,101,1264	0/1:32,1:33:3.09:83,0,3	0/1:35,0:35:18.88:19,0,21	0/0:38,0:38:78.25:0,78,1381	0/1:51,0:51:99:155,0,754	0/0:32,0:32:47.57:0,48,483	0/1:12,0:11:7.78:8,0,99
chr10	70246062	.	TAC	T	665.09	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=11.436;DP=1078;FS=2.628;HRun=0;HaplotypeScore=231.3637;InbreedingCoeff=0.0677;MQ=53.96;MQ0=17;MQRankSum=-4.909;QD=2.67;ReadPosRankSum=-3.430;VQSLOD=2.2846;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:41:22.51:112,0,23	0/1:16,0:16:72.14:87,0,72	0/0:40,1:8:12.01:0,12,142	0/0:40,0:10:11.66:0,12,69	0/1:26,0:26:68.14:141,0,68	0/0:25,3:28:60.20:0,60,941	0/0:41,0:40:80.06:0,80,1128	1/1:45,0:44:45.38:151,45,0	0/0:38,0:38:78.04:0,78,1184	0/0:43,0:43:99:0,104,1468	0/0:32,0:32:74.75:0,75,1151	0/0:50,0:50:99:0,100,1846	0/0:49,2:50:43.89:0,44,1506	0/0:43,1:44:64.22:0,64,1288	0/0:45,3:48:74.45:0,74,1666	0/0:55,0:55:99:0,135,2039	0/1:30,0:30:87.78:88,0,107	0/1:20,0:21:40.46:40,0,93	0/0:20,0:20:54.03:0,54,675	0/0:41,0:41:77.94:0,78,1158	0/0:88,0:88:99:0,118,1873	0/0:35,0:35:78.22:0,78,1128	0/1:32,0:32:88.32:117,0,88	0/1:36,0:36:75.41:75,0,82	0/0:38,1:39:46.45:0,46,1139	0/0:48,0:48:66.71:0,67,1392	0/0:35,0:35:60.14:0,60,863	0/0:11,0:10:18.22:0,18,223
chr10	70246078	.	CAT	C	1623.42	PASS	AB=0.810;AC=12;AF=0.214;AN=56;BaseQRankSum=11.227;DP=1081;FS=0.377;HRun=0;HaplotypeScore=230.7989;InbreedingCoeff=0.3510;MQ=55.55;MQ0=12;MQRankSum=-6.200;QD=5.45;ReadPosRankSum=-1.513;VQSLOD=2.9153;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,34:43:10.76:288,11,0	1/1:5,11:16:0.74:217,1,0	0/1:45,0:19:12.13:12,0,300	0/0:39,0:19:10.46:0,10,272	0/1:6,21:27:4.38:280,0,4	0/0:30,0:30:77.82:0,78,1162	0/0:32,0:32:87.33:0,87,1419	0/1:52,0:50:47.58:48,0,474	0/0:39,0:39:99:0,101,1565	0/0:44,0:44:91.43:0,91,1845	0/0:29,0:29:62.15:0,62,1236	0/0:50,2:52:99:0,105,2313	0/0:47,0:46:79.07:0,79,1883	0/0:39,0:39:54.84:0,55,1487	0/0:54,0:54:99:0,125,2108	0/0:55,0:55:99:0,165,2447	0/1:16,13:29:4.56:230,0,5	0/1:20,0:20:18.12:177,0,18	0/0:26,0:25:61.26:0,61,775	0/0:42,0:41:92.94:0,93,1580	0/0:97,0:96:99:0,121,2624	0/0:31,0:31:89.20:0,89,1328	1/1:13,15:28:4.84:314,5,0	0/1:13,24:37:6.77:210,0,7	0/0:36,0:36:61.68:0,62,1338	0/0:47,0:48:82.02:0,82,1722	0/0:32,0:32:75.14:0,75,1235	0/0:11,0:10:17.05:0,17,302
chr10	70246080	.	TACAC	T	1535.99	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=10.426;DP=1073;FS=0.000;HRun=0;HaplotypeScore=268.2090;InbreedingCoeff=0.8839;MQ=55.76;MQ0=11;MQRankSum=-4.506;QD=7.80;ReadPosRankSum=0.731;VQSLOD=2.1341;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:43,0:42:21.62:250,22,0	1/1:14,1:15:23.83:333,24,0	0/0:43,0:19:55.61:0,56,797	0/0:38,0:20:41.40:0,41,700	1/1:25,1:26:20.90:226,21,0	0/0:30,0:30:72.20:0,72,1520	0/0:33,0:34:96.11:0,96,2031	0/0:55,0:54:71.47:0,71,978	0/0:38,0:38:99:0,99,2177	0/0:43,0:43:99:0,114,2623	0/0:27,0:27:69.22:0,69,1602	0/0:53,0:53:99:0,153,3338	0/0:43,0:43:99:0,117,2765	0/0:34,0:36:98.88:0,99,2152	0/0:56,0:56:99:0,141,3007	0/0:56,0:56:99:0,147,3207	1/1:27,1:29:9.72:315,10,0	0/1:19,0:19:52.70:53,0,213	0/0:24,0:23:44.85:0,45,1004	0/0:43,0:42:95.97:0,96,2254	0/0:97,0:96:99:0,189,3889	0/0:30,0:30:78.16:0,78,1757	1/1:26,1:27:21.87:365,22,0	1/1:35,3:38:18.48:181,18,0	0/0:38,0:38:90.23:0,90,1875	0/0:47,0:48:99:0,118,2482	0/0:32,0:32:78.74:0,79,1833	0/0:11,0:10:18.06:0,18,422
chr10	70246152	.	TAC	T	1727.92	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.633;DP=1214;FS=0.000;HRun=0;HaplotypeScore=189.5654;InbreedingCoeff=0.9999;MQ=59.70;MQ0=0;MQRankSum=-1.708;QD=30.31;ReadPosRankSum=-5.868;VQSLOD=2.2515;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:78.27:0,78,1328	0/0:19,0:19:48.16:0,48,830	0/0:60,0:40:93.30:0,93,1534	0/0:71,0:58:99:0,133,2294	0/0:26,0:26:57.19:0,57,974	0/0:31,0:31:78.25:0,78,1317	0/0:34,0:34:82.15:0,82,1415	1/1:10,47:57:99:1823,140,0	0/0:52,0:52:99:0,151,2560	0/0:50,0:50:99:0,135,2277	0/0:25,0:25:63.20:0,63,1064	0/0:58,0:58:99:0,169,2833	0/0:56,0:56:99:0,160,2699	0/0:40,0:40:99:0,120,1997	0/0:65,0:65:99:0,181,3089	0/0:60,0:60:99:0,172,2931	0/0:35,0:35:87.30:0,87,1498	0/0:21,0:21:57.17:0,57,943	0/0:22,0:22:60.20:0,60,1003	0/0:46,0:46:99:0,120,1968	0/0:86,0:86:99:0,232,3878	0/0:43,0:43:99:0,126,2114	0/0:23,0:23:57.16:0,57,922	0/0:38,0:38:75.26:0,75,1292	0/0:50,0:50:99:0,138,2363	0/0:43,0:43:99:0,114,1934	0/0:38,0:37:99:0,114,1874	0/0:15,2:17:39.12:0,39,641
chr10	70246386	.	AT	A	373.11	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.590;DP=781;FS=2.238;HRun=4;HaplotypeScore=73.5750;InbreedingCoeff=0.9977;MQ=76.90;MQ0=0;MQRankSum=-1.413;QD=24.87;ReadPosRankSum=0.861;VQSLOD=2.4498;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,103,1482	0/0:14,0:14:39.13:0,39,546	0/0:23,0:23:60.19:0,60,805	0/0:19,0:19:45.77:0,46,511	0/0:31,0:31:93.22:0,93,1270	0/0:31,0:31:87.29:0,87,1217	0/0:16,0:16:45.13:0,45,611	0/0:27,0:27:75.24:0,75,1036	0/0:28,0:28:84.28:0,84,1173	0/0:39,0:39:99:0,114,1596	0/0:25,0:25:75.24:0,75,1035	0/0:29,0:29:84.28:0,84,1175	0/0:34,0:34:99:0,99,1363	0/0:27,0:27:81.24:0,81,1100	0/0:35,0:35:96.32:0,96,1342	0/0:30,0:30:87.29:0,87,1217	0/0:25,0:25:75.25:0,75,1049	1/1:1,14:15:39.12:468,39,0	0/0:18,0:18:45.14:0,45,615	0/0:38,0:38:99:0,109,1512	0/0:12,0:12:36.12:0,36,504	0/0:31,0:31:93.30:0,93,1283	0/0:27,0:27:81.18:0,81,1074	0/0:16,0:16:48.15:0,48,656	0/0:46,0:46:99:0,132,1816	0/0:48,0:48:99:0,135,1857	0/0:42,0:42:99:0,117,1574	0/0:12,0:12:24.08:0,24,336
chr10	70248166	.	GGA	G	4434.95	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.520;DP=724;FS=5.906;HRun=0;HaplotypeScore=92.2377;InbreedingCoeff=0.9876;MQ=77.02;MQ0=1;MQRankSum=-3.079;QD=33.35;ReadPosRankSum=1.908;VQSLOD=7.1278;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,163,2741	0/0:13,0:13:36.11:0,36,587	0/0:31,0:31:43.65:0,44,1100	0/0:40,0:39:94.64:0,95,1481	0/0:23,0:23:63.22:0,63,1090	0/0:24,0:24:66.23:0,66,1126	0/0:17,0:17:51.17:0,51,883	0/0:33,0:33:90.28:0,90,1442	0/0:24,0:24:69.24:0,69,1178	0/0:11,0:11:27.07:0,27,417	0/0:33,0:33:87.28:0,87,1471	0/0:24,0:24:63.22:0,63,1083	0/0:23,0:23:57.20:0,57,986	0/0:18,0:18:45.14:0,45,752	0/0:31,0:31:87.28:0,87,1472	0/0:24,0:24:63.22:0,63,1084	0/0:40,0:40:99:0,114,1954	0/0:18,0:18:48.14:0,48,800	1/1:1,19:20:57.16:741,57,0	1/1:4,29:33:90.30:1198,90,0	1/1:4,28:32:69.23:919,69,0	0/0:24,0:24:63.22:0,63,1082	0/0:18,0:18:48.15:0,48,804	0/0:32,0:32:90.25:0,90,1491	0/0:30,0:30:87.29:0,87,1480	1/1:1,20:21:57.14:739,57,0	1/1:1,19:19:54.18:719,54,0	1/1:0,7:7:8.93:119,9,0
chr10	70248605	.	GA	G	5698.02	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.575;DP=677;FS=0.343;HRun=2;HaplotypeScore=65.9281;InbreedingCoeff=0.9814;MQ=73.56;MQ0=0;MQRankSum=-1.566;QD=32.94;ReadPosRankSum=-0.469;VQSLOD=4.5148;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:81.26:1052,81,0	1/1:1,11:12:30.10:390,30,0	0/0:14,0:13:39.13:0,39,585	0/0:18,0:18:51.16:0,51,712	1/1:0,19:19:48.16:623,48,0	0/0:26,0:26:69.23:0,69,1034	0/0:17,0:17:51.17:0,51,763	1/1:2,28:30:84.27:1090,84,0	0/0:30,0:30:90.29:0,90,1313	0/0:25,0:25:69.23:0,69,1010	0/0:23,0:23:69.22:0,69,1015	0/0:35,0:35:99:0,102,1528	0/0:31,0:31:93.32:0,93,1393	0/0:17,0:17:51.16:0,51,744	0/0:29,0:29:84.28:0,84,1253	0/0:30,0:30:90.30:0,90,1331	1/1:1,26:27:72.23:935,72,0	1/1:2,11:13:5.78:362,6,0	0/0:22,0:22:66.22:0,66,971	0/0:22,0:22:66.22:0,66,984	0/0:47,0:47:99:0,141,2090	0/0:15,0:15:42.14:0,42,629	1/1:0,15:15:39.13:506,39,0	1/1:1,26:27:57.19:740,57,0	0/0:24,0:24:72.24:0,72,1074	0/0:30,0:30:87.29:0,87,1286	0/0:36,0:35:99:0,108,1613	0/0:13,0:13:36.12:0,36,539
chr10	70248833	.	T	TA	2568.77	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=7.173;DP=586;FS=0.755;HRun=9;HaplotypeScore=79.7635;InbreedingCoeff=0.9166;MQ=71.32;MQ0=0;MQRankSum=-0.501;QD=12.84;ReadPosRankSum=-0.140;VQSLOD=3.4121;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,1:33:48.93:251,49,0	1/1:0,1:12:31.42:175,31,0	0/0:9,0:9:5.98:0,6,52	0/1:10,0:10:4.72:5,0,67	1/1:8,0:41:95.25:521,95,0	0/0:22,0:22:53.95:0,54,463	0/0:19,1:20:14.78:0,15,353	1/1:6,20:26:57.09:616,57,0	0/0:17,0:17:41.98:0,42,365	0/0:27,0:27:74.98:0,75,649	0/0:27,0:27:77.97:0,78,677	0/0:16,0:16:38.95:0,39,334	0/0:19,0:19:50.98:0,51,443	0/0:16,0:16:44.99:0,45,391	0/0:19,0:19:50.98:0,51,443	0/0:10,0:10:26.98:0,27,234	1/1:1,1:14:34.56:182,35,0	1/1:1,23:24:60.16:663,60,0	0/0:28,0:28:56.98:0,57,495	0/0:26,0:26:71.98:0,72,625	0/0:12,0:12:29.99:0,30,260	0/0:17,0:17:47.99:0,48,417	1/1:4,0:20:34.43:174,34,0	1/1:3,1:20:37.34:189,37,0	0/0:32,0:32:86.94:0,87,752	0/0:31,0:31:86.97:0,87,755	0/0:18,0:18:41.98:0,42,365	0/0:20,0:20:59.99:0,60,521
chr10	70250019	.	T	TTC	5979.21	PASS	AB=0.585;AC=15;AF=0.268;AN=56;BaseQRankSum=8.949;DP=756;FS=11.037;HRun=0;HaplotypeScore=172.8270;InbreedingCoeff=0.8993;MQ=58.30;MQ0=7;MQRankSum=-6.620;QD=26.46;ReadPosRankSum=1.717;VQSLOD=5.7666;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,25:33:40.27:784,40,0	1/1:8,12:20:30.68:692,31,0	0/0:30,0:14:28.33:0,28,371	0/0:25,0:14:23.28:0,23,313	1/1:21,29:50:58.39:1554,58,0	0/0:21,0:21:60.18:0,60,820	0/0:21,0:21:60.18:0,60,821	1/1:26,12:31:49.66:1020,50,0	0/0:21,0:21:57.18:0,57,790	0/0:42,0:42:99:0,120,1651	0/0:29,0:29:81.24:0,81,1090	0/0:20,0:20:57.18:0,57,795	0/0:24,0:24:72.23:0,72,1010	0/0:28,0:28:78.23:0,78,1059	0/0:28,0:28:78.25:0,78,1078	0/0:29,0:29:81.25:0,81,1118	0/1:9,21:31:37.59:610,0,38	1/1:3,9:13:16.65:322,17,0	0/0:18,0:18:43.11:0,43,535	0/0:37,0:37:76.46:0,76,972	0/0:9,0:9:18.05:0,18,255	0/0:33,0:33:93.26:0,93,1283	1/1:2,21:24:41.18:602,41,0	1/1:6,9:15:12.07:396,12,0	0/0:38,0:38:99:0,108,1489	0/0:42,0:41:88.45:0,88,1148	0/0:24,0:23:54.20:0,54,734	0/0:11,0:11:33.11:0,33,435
chr10	70250028	.	T	TCTTCCTTC	12052.20	PASS	AB=0.956;AC=26;AF=0.464;AN=56;BaseQRankSum=17.274;DP=735;FS=9.425;HRun=0;HaplotypeScore=230.7522;InbreedingCoeff=0.8384;MQ=55.94;MQ0=8;MQRankSum=-11.444;QD=33.85;ReadPosRankSum=-0.247;VQSLOD=3.0694;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,2:31:57.15:1127,57,0	0/1:21,0:21:58.89:443,0,59	0/0:23,0:7:5.94:0,6,63	0/0:21,0:12:5.96:0,6,104	1/1:45,5:51:99:2521,107,0	0/0:24,0:24:63.18:0,63,1179	0/0:21,0:21:48.08:0,48,867	1/1:39,0:31:45.05:532,45,0	0/0:18,0:18:39.12:0,39,886	0/0:45,0:45:99:0,117,2368	0/0:30,0:30:78.26:0,78,1671	0/0:19,0:19:45.15:0,45,1042	0/0:25,0:25:57.20:0,57,1132	0/0:26,0:26:72.21:0,72,1582	0/0:29,0:29:69.18:0,69,1454	0/0:28,0:28:66.21:0,66,1443	0/1:28,3:31:3.18:893,0,3	1/1:11,0:10:21.05:368,21,0	1/1:19,0:19:25.81:360,26,0	1/1:31,0:31:74.89:1142,75,0	1/1:9,0:9:7.06:110,7,0	0/0:31,0:31:87.28:0,87,1959	1/1:15,5:20:36.12:944,36,0	1/1:11,2:14:38.89:745,39,0	0/0:38,0:38:93.30:0,93,2034	1/1:42,0:41:43.55:1402,44,0	1/1:24,0:23:57.14:963,57,0	1/1:12,0:11:30.02:502,30,0
chr10	70250853	.	C	CAG	4945.18	PASS	AC=16;AF=0.348;AN=46;BaseQRankSum=14.740;DP=506;FS=4.055;HRun=0;HaplotypeScore=102.8426;InbreedingCoeff=0.9889;MQ=98.69;MQ0=0;MQRankSum=-9.700;QD=35.83;ReadPosRankSum=0.091;VQSLOD=7.0657;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:21:45.11:620,45,0	1/1:1,7:9:24.07:341,24,0	0/0:28,0:28:81.24:0,81,1192	0/0:30,0:30:84.04:0,84,1275	1/1:2,17:19:51.17:713,51,0	0/0:21,0:21:60.20:0,60,977	0/0:25,0:25:75.26:0,75,1223	1/1:5,19:24:63.13:909,63,0	0/0:32,0:32:93.22:0,93,1459	0/0:21,0:21:60.20:0,60,974	0/0:32,0:32:96.31:0,96,1538	0/0:25,0:25:75.25:0,75,1199	0/0:27,0:27:78.27:0,78,1271	0/0:16,0:16:48.16:0,48,782	0/0:33,0:33:93.31:0,93,1490	0/0:31,0:31:93.30:0,93,1492	1/1:4,10:14:32.66:450,33,0	1/1:1,13:14:42.14:641,42,0	./.	./.	./.	0/0:18,0:18:54.18:0,54,876	1/1:1,20:21:57.19:822,57,0	1/1:2,14:16:33.09:450,33,0	0/0:26,0:26:78.24:0,78,1246	0/0:3,0:3:9.03:0,9,147	./.	./.
chr10	70250854	.	T	TG	3201.16	PASS	AC=16;AF=0.348;AN=46;BaseQRankSum=16.123;DP=518;FS=6.022;HRun=1;HaplotypeScore=103.8554;InbreedingCoeff=0.9438;MQ=98.30;MQ0=0;MQRankSum=-11.337;QD=21.48;ReadPosRankSum=-0.852;VQSLOD=3.2642;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,17:23:51:478,51,0	1/1:3,7:10:2.56:211,3,0	0/0:28,0:28:69.19:0,69,856	0/0:31,0:31:87.21:0,87,1077	1/1:1,18:19:50.87:443,51,0	0/0:22,0:22:60.20:0,60,779	0/0:25,0:25:75.24:0,75,974	1/1:9,19:28:71.57:737,72,0	0/0:32,0:32:96.30:0,96,1232	0/0:21,0:21:63.20:0,63,809	0/0:31,0:31:93.30:0,93,1207	0/0:25,0:25:72.23:0,72,935	0/0:27,0:27:78.25:0,78,1013	0/0:16,0:16:48.16:0,48,623	0/0:33,0:33:93.29:0,93,1193	0/0:31,0:31:93.29:0,93,1194	1/1:4,10:14:32.69:327,33,0	1/1:1,13:14:42.07:418,42,0	./.	./.	./.	0/0:18,0:18:54.18:0,54,701	1/1:4,20:24:51.80:528,52,0	1/1:3,14:17:8.99:244,9,0	0/0:26,0:26:75.24:0,75,974	0/0:3,0:3:9.03:0,9,117	./.	./.
chr10	70251050	.	TTCTCTCTCTCTCTCTCTCTCTCTC	T	517.36	PASS	AB=0.833;AC=9;AF=0.205;AN=44;BaseQRankSum=2.452;DP=407;FS=0.000;HRun=0;HaplotypeScore=277.3642;InbreedingCoeff=0.5676;MQ=77.54;MQ0=19;MQRankSum=0.856;QD=7.39;ReadPosRankSum=0.592;VQSLOD=2.2341;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/1:8,0:10:15.96:115,0,16	0/0:25,0:17:3.01:0,3,43	0/0:46,0:29:6.02:0,6,119	1/1:11,1:15:2.99:24,3,0	0/0:15,0:13:15.52:0,16,831	0/0:17,0:14:10.05:0,10,711	0/0:35,0:34:36.59:0,37,1287	0/0:13,0:13:12.04:0,12,541	0/0:17,0:17:18.91:0,19,770	0/0:13,0:12:6.02:0,6,99	0/0:19,0:19:24.08:0,24,1405	0/0:16,0:16:18.06:0,18,861	0/0:13,0:13:9.03:0,9,651	0/0:24,0:24:30.10:0,30,1614	0/0:11,0:11:21.07:0,21,1286	1/1:14,0:13:3.01:181,3,0	0/0:17,0:15:21.07:0,21,1349	./.	./.	./.	0/0:22,0:22:24.08:0,24,1391	1/1:10,2:11:12.02:213,12,0	1/1:18,0:16:8.99:114,9,0	0/0:19,0:19:15.05:0,15,479	0/0:1,0:1:3.01:0,3,101	./.	./.
chr10	70251104	.	CTGTGTGTGTGTGTG	C	2043.48	PASS	AB=0.845;AC=20;AF=0.400;AN=50;BaseQRankSum=5.383;DP=438;FS=4.919;HRun=0;HaplotypeScore=157.6083;InbreedingCoeff=0.5100;MQ=33.82;MQ0=71;MQRankSum=-2.206;QD=9.20;ReadPosRankSum=2.450;VQSLOD=2.5801;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:25:2.77:106,3,0	0/0:5,0:5:6.02:0,6,343	./.	./.	0/0:9,0:15:0.94:0,1,1	1/1:15,10:24:5.28:130,5,0	1/1:15,5:15:2.96:114,3,0	0/0:17,0:16:14.94:0,15,212	0/0:11,1:16:0.94:0,1,2	1/1:12,7:17:20.22:575,20,0	0/0:4,11:16:0.47:0,0,1	1/1:10,0:8:3.01:111,3,0	1/1:10,6:14:8.76:242,9,0	1/1:11,4:14:5.95:150,6,0	0/0:13,5:15:0.47:0,0,1	1/1:13,5:17:2.50:113,2,0	1/1:19,0:19:14.97:460,15,0	0/1:17,0:13:99:188,0,224	0/0:5,0:4:8.24:0,8,257	0/0:14,0:10:12.01:0,12,522	0/0:17,0:7:9.03:0,9,442	0/0:10,0:12:0.47:0,0,1	0/1:11,0:18:0:0,0,0	0/0:9,0:15:0.47:0,0,1	./.	0/0:13,0:11:24.08:0,24,1185	0/0:14,0:11:24.97:0,25,818	0/0:10,0:2:3.01:0,3,108
chr10	70251935	.	G	GA	16241.56	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-16.659;DP=749;FS=10.596;HRun=0;HaplotypeScore=68.8874;InbreedingCoeff=1.0000;MQ=90.57;MQ0=0;MQRankSum=-3.035;QD=45.37;ReadPosRankSum=0.058;VQSLOD=4.1966;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:45.15:719,45,0	1/1:0,13:13:39.13:624,39,0	0/0:31,0:31:93.26:0,93,1221	0/0:26,0:26:64.93:0,65,890	1/1:0,41:41:99:1762,111,0	0/0:21,0:21:60.20:0,60,839	0/0:21,0:21:63.21:0,63,879	1/1:2,40:42:99:1881,120,0	0/0:22,0:22:66.22:0,66,923	0/0:29,0:29:87.26:0,87,1183	0/0:20,0:20:60.20:0,60,839	0/0:31,0:31:90.30:0,90,1257	0/0:30,0:30:87.26:0,87,1178	0/0:29,0:29:84.27:0,84,1158	0/0:37,0:37:99:0,111,1551	0/0:35,0:35:99:0,105,1453	1/1:0,22:22:66.23:1055,66,0	1/1:0,17:17:51.17:815,51,0	1/1:2,18:20:57.19:896,57,0	1/1:0,34:34:93.32:1485,93,0	1/1:0,29:29:84.29:1343,84,0	0/0:34,0:34:99:0,99,1384	1/1:1,32:33:93.32:1487,93,0	1/1:0,15:15:42.14:672,42,0	0/0:25,0:25:75.24:0,75,1033	1/1:0,26:26:78.27:1247,78,0	1/1:0,36:36:99:1631,102,0	1/1:0,14:14:39.13:623,39,0
chr10	70256503	.	CT	C	1962.47	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=5.580;DP=564;FS=1.778;HRun=12;HaplotypeScore=65.6374;InbreedingCoeff=0.8957;MQ=62.65;MQ0=0;MQRankSum=-1.217;QD=13.53;ReadPosRankSum=4.408;VQSLOD=4.0800;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:28:61.78:470,62,0	0/0:8,0:8:23.88:0,24,227	1/1:2,1:2:0.87:20,1,0	0/0:6,0:3:3:0,3,26	1/1:4,22:27:28.33:393,28,0	0/0:27,0:27:69.11:0,69,685	0/0:19,0:19:33.92:0,34,480	0/0:11,0:26:45.99:0,46,265	0/0:17,0:18:47.93:0,48,471	0/0:24,0:24:54.10:0,54,545	0/0:16,0:17:18.85:0,19,357	0/0:30,1:31:48.57:0,49,652	0/0:31,0:31:72.09:0,72,706	0/0:27,0:27:54.11:0,54,548	0/0:23,0:23:54.08:0,54,540	0/0:22,1:23:39.80:0,40,558	1/1:4,21:27:66.82:499,67,0	1/1:1,0:18:30.55:90,31,0	0/0:9,0:19:37.69:0,38,239	0/0:4,0:21:57.92:0,58,345	0/0:2,0:11:11.36:0,11,57	0/0:10,1:11:6.88:0,7,251	1/1:5,18:23:50.79:395,51,0	1/1:3,15:19:37.87:284,38,0	0/0:20,0:20:54.11:0,54,548	0/0:6,0:26:66.55:0,67,405	0/0:6,0:22:43.18:0,43,254	0/0:2,0:7:11.51:0,12,66
chr10	70256630	.	C	CA	545.18	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.429;DP=586;FS=5.556;HRun=0;HaplotypeScore=60.0823;InbreedingCoeff=0.9988;MQ=92.78;MQ0=0;MQRankSum=-4.165;QD=36.35;ReadPosRankSum=1.566;VQSLOD=3.4411;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1535	0/0:10,0:10:30.10:0,30,419	0/0:29,0:29:78.22:0,78,1057	0/0:21,0:21:57.19:0,57,779	0/0:30,0:30:90.30:0,90,1253	0/0:23,0:23:69.22:0,69,950	0/0:15,0:15:45.15:0,45,629	0/0:31,0:31:93.29:0,93,1268	0/0:18,0:18:54.18:0,54,754	0/0:25,0:25:75.23:0,75,1005	0/0:23,0:23:66.22:0,66,922	0/0:29,0:29:84.26:0,84,1143	0/0:14,0:14:42.14:0,42,587	0/0:21,0:21:63.17:0,63,816	0/0:22,0:22:66.22:0,66,922	0/0:17,0:17:51.16:0,51,697	0/0:24,0:24:72.24:0,72,1007	1/1:0,15:15:42.08:640,42,0	0/0:23,0:23:69.22:0,69,943	0/0:17,0:17:51.17:0,51,713	0/0:22,0:22:62.86:0,63,807	0/0:22,0:22:66.22:0,66,922	0/0:13,0:13:39.13:0,39,543	0/0:14,0:14:42.14:0,42,583	0/0:25,0:25:75.24:0,75,1033	0/0:21,0:21:63.21:0,63,873	0/0:15,0:15:42.07:0,42,531	0/0:10,0:10:30.10:0,30,418
chr10	70256673	.	GC	G	794.37	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.070;DP=566;FS=4.137;HRun=1;HaplotypeScore=63.3339;InbreedingCoeff=0.9842;MQ=78.20;MQ0=0;MQRankSum=-0.684;QD=34.54;ReadPosRankSum=-3.825;VQSLOD=2.2172;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1697	0/0:13,0:13:39.12:0,39,600	0/0:14,0:14:42.13:0,42,597	0/0:13,0:13:37.69:0,38,484	0/0:26,0:26:78.21:0,78,1172	0/0:20,0:20:60.20:0,60,957	0/0:20,0:20:60.16:0,60,885	1/1:0,23:23:66.20:889,66,0	0/0:16,0:16:48.12:0,48,696	0/0:30,0:30:90.28:0,90,1359	0/0:18,0:18:54.18:0,54,861	0/0:26,0:26:78.26:0,78,1225	0/0:17,0:17:51.17:0,51,807	0/0:20,0:20:57.19:0,57,908	0/0:26,0:26:78.24:0,78,1199	0/0:23,0:23:69.24:0,69,1100	0/0:25,0:25:72.25:0,72,1132	0/0:18,0:18:51.17:0,51,799	0/0:22,0:22:66.21:0,66,1030	0/0:12,0:12:36.12:0,36,574	0/0:23,0:23:69.22:0,69,1073	0/0:22,0:22:66.11:0,66,909	0/0:14,0:14:42.13:0,42,646	0/0:19,0:19:57.16:0,57,860	0/0:20,0:20:60.19:0,60,935	0/0:25,0:25:71.80:0,72,1046	0/0:20,0:20:60.20:0,60,952	0/0:5,0:5:15.05:0,15,237
chr10	70256741	.	A	ACCCAGC	955.80	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.871;DP=623;FS=0.000;HRun=0;HaplotypeScore=154.4768;InbreedingCoeff=0.9952;MQ=90.61;MQ0=0;MQRankSum=-5.876;QD=79.65;ReadPosRankSum=-0.698;VQSLOD=3.8817;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.28:0,87,1979	0/0:12,0:12:30.10:0,30,714	0/0:25,0:25:66.18:0,66,1370	0/0:27,0:27:78.21:0,78,1685	0/0:22,0:22:60.68:0,61,1383	0/0:32,0:32:96.33:0,96,2242	0/0:17,0:17:51.16:0,51,1158	0/0:37,0:37:99:0,108,2486	0/0:16,0:16:48.16:0,48,1091	0/0:24,0:24:63.21:0,63,1468	0/0:23,0:23:66.21:0,66,1469	0/0:21,0:21:60.21:0,60,1443	0/0:27,0:27:78.25:0,78,1807	0/0:12,0:12:36.12:0,36,831	0/0:29,0:29:84.27:0,84,1972	0/0:30,0:30:90.29:0,90,2085	0/0:29,0:29:80.89:0,81,1897	1/1:3,8:12:36.08:1051,36,0	0/0:23,0:23:66.22:0,66,1484	0/0:15,0:15:42.13:0,42,962	0/0:26,0:26:72.25:0,72,1685	0/0:15,0:15:45.14:0,45,1034	0/0:18,0:18:54.18:0,54,1263	0/0:27,0:27:78.19:0,78,1726	0/0:19,0:19:57.17:0,57,1317	0/0:27,0:27:75.26:0,75,1803	0/0:21,0:21:57.19:0,57,1326	0/0:7,0:7:21.07:0,21,505
chr10	70256808	.	G	GTTT	297.22	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=4.886;DP=650;FS=3.263;HRun=0;HaplotypeScore=123.4818;InbreedingCoeff=0.6441;MQ=82.08;MQ0=0;MQRankSum=-3.677;QD=15.64;ReadPosRankSum=-1.759;VQSLOD=3.2647;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:62.60:0,63,694	0/1:10,0:10:20.10:20,0,73	0/0:18,0:18:50.52:0,51,757	0/0:18,0:18:30.43:0,30,756	0/0:30,0:30:35.18:0,35,590	0/0:34,0:34:99:0,102,1834	0/0:17,0:17:51.16:0,51,913	0/0:37,0:37:99:0,110,1906	0/0:18,0:18:54.18:0,54,976	0/0:27,0:27:81.25:0,81,1420	0/0:23,0:23:69.24:0,69,1235	0/0:29,0:29:87.29:0,87,1592	0/0:30,0:30:90.28:0,90,1597	0/0:19,0:19:54.19:0,54,999	0/0:32,0:32:96.33:0,96,1769	0/0:30,0:30:90.31:0,90,1651	0/0:20,0:20:31.14:0,31,416	1/1:1,6:9:20:381,20,0	0/0:27,0:27:78.26:0,78,1376	0/0:38,0:38:99:0,111,1994	0/0:16,0:16:42.13:0,42,732	0/0:19,0:19:54.06:0,54,989	0/0:20,0:20:50.62:0,51,449	0/0:18,0:18:53.93:0,54,454	0/0:20,0:20:60.19:0,60,1081	0/0:26,0:26:78.24:0,78,1350	0/0:27,0:27:78.24:0,78,1349	0/0:8,0:8:24.08:0,24,447
chr10	70256809	.	G	GTTT	625.44	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.820;DP=660;FS=5.332;HRun=9;HaplotypeScore=126.4730;InbreedingCoeff=0.9916;MQ=82.92;MQ0=0;MQRankSum=-2.193;QD=32.92;ReadPosRankSum=-1.742;VQSLOD=2.0762;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.01:0,78,771	1/1:2,8:10:18.06:356,18,0	0/0:19,0:19:39.02:0,39,448	0/0:19,0:19:37.05:0,37,406	0/0:30,0:30:56.28:0,56,721	0/0:35,0:35:99:0,99,1230	0/0:17,0:17:48.15:0,48,606	0/0:38,0:38:99:0,101,1209	0/0:17,0:18:43.69:0,44,566	0/0:27,0:27:69.20:0,69,872	0/0:25,0:25:57.13:0,57,710	0/0:29,0:29:87.24:0,87,1082	0/0:30,0:30:78.21:0,78,979	0/0:19,0:19:57.17:0,57,705	0/0:33,0:33:90.24:0,90,1137	0/0:30,0:30:81.24:0,81,1024	0/0:20,0:20:50.50:0,51,501	1/1:9,0:9:21.07:388,21,0	0/0:27,0:27:59.74:0,60,708	0/0:37,0:39:99:0,104,1294	0/0:16,0:16:36.05:0,36,428	0/0:19,0:19:49.45:0,49,641	0/0:19,0:20:24.54:0,25,451	0/0:18,0:18:54.07:0,54,519	0/0:20,0:20:57.18:0,57,720	0/0:25,0:25:66.19:0,66,820	0/0:27,0:27:69.17:0,69,844	0/0:11,0:11:24.01:0,24,303
chr10	70258392	.	GAGT	G	5870.25	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.157;DP=717;FS=7.367;HRun=0;HaplotypeScore=101.6390;InbreedingCoeff=0.9937;MQ=97.28;MQ0=0;MQRankSum=-4.449;QD=46.22;ReadPosRankSum=3.537;VQSLOD=6.9222;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,2452	0/0:14,0:14:39.13:0,39,899	0/0:42,0:42:99:0,120,2599	0/0:29,0:29:84.19:0,84,1667	0/0:33,0:33:93.32:0,93,2144	0/0:43,0:43:99:0,123,2834	0/0:20,0:20:57.20:0,57,1300	0/0:40,0:40:99:0,117,2680	0/0:23,0:23:69.22:0,69,1525	0/0:20,0:20:60.21:0,60,1375	0/0:26,0:26:72.25:0,72,1640	0/0:31,0:31:93.32:0,93,2125	0/0:13,0:13:39.13:0,39,899	0/0:26,0:26:78.27:0,78,1755	0/0:23,0:23:66.23:0,66,1490	0/0:23,0:23:69.20:0,69,1460	0/0:38,0:38:99:0,114,2617	0/0:18,0:18:54.19:0,54,1245	1/1:1,12:13:36.12:614,36,0	1/1:0,26:26:78.27:1329,78,0	1/1:2,31:33:78.22:1299,78,0	0/0:27,0:27:81.28:0,81,1856	0/0:19,0:19:57.20:0,57,1293	0/0:20,0:20:57.20:0,57,1304	0/0:24,0:24:72.25:0,72,1661	1/1:1,29:30:87.28:1452,87,0	1/1:1,20:21:57.20:972,57,0	1/1:0,4:4:12.04:205,12,0
chr10	70258520	.	GA	G	3029.03	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=7.263;DP=572;FS=3.280;HRun=10;HaplotypeScore=64.6885;InbreedingCoeff=0.8773;MQ=75.21;MQ0=0;MQRankSum=0.323;QD=17.51;ReadPosRankSum=0.446;VQSLOD=4.2749;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:53.99:469,54,0	0/0:9,0:9:24.06:0,24,266	0/1:17,0:17:29.38:29,0,195	0/0:9,0:10:21.01:0,21,205	1/1:3,26:29:68.95:599,69,0	0/0:27,0:27:75.16:0,75,810	0/0:19,0:19:51.11:0,51,547	1/1:11,22:33:62.90:533,63,0	0/0:11,0:11:27.07:0,27,299	0/0:20,0:21:53.98:0,54,578	0/0:22,1:23:54.61:0,55,591	0/0:26,0:26:63.17:0,63,697	0/0:17,1:18:10.02:0,10,329	0/0:20,0:20:54.13:0,54,588	0/0:20,0:20:42.11:0,42,465	0/0:14,1:15:13.03:0,13,361	1/1:4,25:29:74.97:651,75,0	0/0:6,0:27:60.01:0,60,317	0/0:14,0:15:32.91:0,33,337	0/0:39,0:41:96.05:0,96,1023	0/0:5,0:7:14.71:0,15,128	0/0:16,1:17:16.05:0,16,398	1/1:4,23:27:56.97:495,57,0	1/1:1,17:18:50.99:443,51,0	0/0:23,0:24:69.02:0,69,744	0/0:20,1:21:16.05:0,16,399	0/0:20,1:21:31.10:0,31,571	0/0:7,0:7:21.06:0,21,232
chr10	70260463	.	TTC	T	226.46	PASS	AB=0.959;AC=13;AF=0.433;AN=30;BaseQRankSum=1.552;DP=563;FS=32.570;HRun=0;HaplotypeScore=97.1078;InbreedingCoeff=0.0295;MQ=36.15;MQ0=100;MQRankSum=-0.990;QD=1.20;ReadPosRankSum=2.883;VQSLOD=-0.2864;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	1/1:11,0:11:2.90:16,3,0	./.	./.	0/1:25,1:21:23.07:23,0,37	1/1:29,0:28:5.77:31,6,0	./.	./.	0/0:26,0:22:2.98:0,3,21	0/1:17,0:11:34.29:37,0,34	./.	0/1:18,0:15:8.08:8,0,30	0/0:18,0:11:6.02:0,6,80	./.	1/1:15,3:16:12:115,12,0	0/0:29,0:29:2.59:0,3,30	0/0:9,0:8:2.98:0,3,21	./.	./.	1/1:8,5:9:6.01:63,6,0	0/0:28,0:26:2.98:0,3,22	0/1:30,0:27:29.65:35,0,30	0/1:22,2:19:12.96:13,0,142	0/0:15,0:12:12.84:0,13,99
chr10	70260647	.	TG	T	12121.39	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=8.292;DP=809;FS=5.383;HRun=5;HaplotypeScore=83.6193;InbreedingCoeff=0.9869;MQ=76.64;MQ0=0;MQRankSum=0.681;QD=30.15;ReadPosRankSum=3.389;VQSLOD=5.4936;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,52:54:99:1700,150,0	1/1:0,13:13:39.07:428,39,0	0/0:24,0:23:60.18:0,60,784	0/0:29,0:28:49.18:0,49,753	1/1:0,23:23:63.18:714,63,0	0/0:20,0:20:45.11:0,45,594	0/0:31,0:31:90.30:0,90,1231	1/1:4,29:33:84.22:943,84,0	0/0:33,0:33:84.19:0,84,1106	0/0:30,0:30:84.23:0,84,1087	0/0:15,0:15:36.11:0,36,476	0/0:36,0:36:99:0,99,1353	0/0:43,0:43:99:0,114,1556	0/0:26,0:26:78.19:0,78,1013	0/0:28,0:28:75.24:0,75,1010	0/0:42,0:42:99:0,114,1516	1/1:0,39:39:99:1259,111,0	1/1:3,19:22:57.16:647,57,0	1/1:2,19:21:54.12:593,54,0	1/1:1,16:17:45.13:510,45,0	1/1:3,45:48:99:1463,129,0	0/0:24,0:24:60.20:0,60,811	1/1:3,11:14:30.08:339,30,0	1/1:0,55:55:99:1735,153,0	0/0:26,0:26:66.14:0,66,859	1/1:6,29:35:11.17:905,11,0	1/1:2,23:25:69.20:782,69,0	1/1:0,3:3:9.03:102,9,0
chr10	70261404	.	AC	A	500.18	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.512;DP=509;FS=8.346;HRun=3;HaplotypeScore=72.9007;InbreedingCoeff=0.9402;MQ=84.84;MQ0=0;MQRankSum=-2.065;QD=31.26;ReadPosRankSum=0.492;VQSLOD=3.4577;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.31:0,93,1334	0/0:14,0:14:29.84:0,30,432	0/0:17,1:18:22.96:0,23,620	0/0:24,0:22:53.89:0,54,719	0/0:25,0:25:72.24:0,72,1037	0/0:14,0:14:39.12:0,39,543	0/0:21,0:21:63.21:0,63,907	0/0:18,0:18:54.17:0,54,762	0/0:21,0:21:57.19:0,57,819	0/0:20,0:20:60.19:0,60,848	0/0:10,0:10:30.06:0,30,376	0/0:27,0:27:81.27:0,81,1161	0/0:22,0:22:63.21:0,63,907	0/0:19,0:19:57.17:0,57,802	0/0:26,0:26:78.25:0,78,1100	0/0:16,0:16:45.15:0,45,648	0/0:28,0:28:75.24:0,75,1062	1/1:0,16:16:48.15:595,48,0	0/0:19,0:19:54.18:0,54,774	0/0:13,0:13:36.11:0,36,501	0/0:21,0:21:54.18:0,54,777	0/0:12,0:12:30.10:0,30,432	0/0:22,0:22:63.20:0,63,875	0/0:13,0:13:33.11:0,33,471	0/0:10,0:10:30.10:0,30,432	0/0:10,0:10:30.10:0,30,432	0/0:13,0:13:39.13:0,39,555	0/0:3,0:3:9.03:0,9,130
chr10	70261530	.	CAA	C	6615.62	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.821;DP=663;FS=0.000;HRun=3;HaplotypeScore=88.6945;InbreedingCoeff=0.9962;MQ=90.81;MQ0=0;MQRankSum=-2.654;QD=40.34;ReadPosRankSum=4.419;VQSLOD=4.3729;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,48:49:99:1929,126,0	0/0:10,0:10:30.10:0,30,570	0/0:26,0:26:72.24:0,72,1339	0/0:29,0:29:87.29:0,87,1500	1/1:0,24:24:63.21:965,63,0	0/0:17,0:17:51.16:0,51,953	0/0:25,0:25:75.23:0,75,1367	0/0:25,0:25:72.23:0,72,1330	0/0:20,0:20:57.20:0,57,1090	0/0:17,0:17:51.17:0,51,986	0/0:16,0:16:48.15:0,48,894	0/0:22,0:22:66.22:0,66,1244	0/0:23,0:23:69.24:0,69,1326	0/0:24,0:24:69.24:0,69,1332	0/0:25,0:25:72.25:0,72,1385	0/0:27,0:27:78.26:0,78,1471	1/1:0,38:38:99:1516,99,0	0/0:16,0:16:48.16:0,48,927	0/0:27,0:27:81.28:0,81,1565	0/0:28,0:28:84.29:0,84,1605	0/0:35,0:35:99:0,99,1881	0/0:21,0:21:63.22:0,63,1217	1/1:0,24:24:63.21:965,63,0	1/1:2,27:29:81.27:1240,81,0	0/0:14,0:14:42.14:0,42,803	0/0:17,0:17:48.16:0,48,928	0/0:30,0:30:90.31:0,90,1718	0/0:5,0:5:15.05:0,15,289
chr10	70262230	.	TAAAAAAA	T	4403.69	PASS	AB=0.675;AC=25;AF=0.446;AN=56;BaseQRankSum=10.420;DP=437;FS=8.438;HRun=18;HaplotypeScore=115.0107;InbreedingCoeff=0.7344;MQ=67.23;MQ0=2;MQRankSum=-9.880;QD=20.20;ReadPosRankSum=5.276;VQSLOD=0.5414;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:20:19.76:249,20,0	0/1:0,0:4:0.33:1,0,0	0/0:27,0:18:14.97:0,15,267	0/1:14,0:9:9.07:9,0,203	1/1:5,1:25:3.37:252,3,0	0/0:12,0:16:42.14:0,42,1173	0/0:4,0:6:12.04:0,12,346	1/1:6,1:21:41.86:577,42,0	0/0:11,0:12:24.07:0,24,679	0/0:20,0:27:54.19:0,54,1433	0/0:10,0:11:27.08:0,27,650	0/0:14,0:20:45.15:0,45,1166	0/0:12,0:12:24.08:0,24,685	0/0:13,0:18:39.13:0,39,1111	0/0:16,0:20:48.16:0,48,1288	0/0:13,0:18:45.15:0,45,1288	1/1:9,0:23:20.44:142,20,0	0/0:5,0:18:38.51:0,39,449	1/1:2,12:14:32.83:590,33,0	1/1:5,13:18:29.05:510,29,0	1/1:1,3:4:6.02:107,6,0	0/0:1,0:1:3.01:0,3,63	1/1:5,0:13:20.23:126,20,0	1/1:9,1:13:3.34:65,3,0	0/0:13,0:13:27.09:0,27,773	0/1:2,20:22:48.25:1010,0,48	1/1:7,14:22:32.03:591,32,0	1/1:0,3:3:9.03:174,9,0
chr10	70262616	.	C	CAT	1753.91	PASS	AB=0.791;AC=11;AF=0.196;AN=56;BaseQRankSum=1.475;DP=303;FS=11.007;HRun=0;HaplotypeScore=87.7538;InbreedingCoeff=0.0182;MQ=73.14;MQ0=1;MQRankSum=-3.649;QD=15.25;ReadPosRankSum=-2.947;VQSLOD=1.6447;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:8.65:0,9,58	1/1:1,0:2:3:26,3,0	0/0:9,0:9:11.36:0,11,82	0/0:9,0:8:13.40:0,13,86	0/0:24,0:24:23.42:0,23,100	0/0:18,0:18:45.13:0,45,531	0/0:9,0:9:18.04:0,18,205	0/1:17,4:27:14.97:484,0,15	0/0:2,0:2:5.75:0,6,48	0/0:18,0:18:36.11:0,36,434	0/0:11,0:11:22.60:0,23,264	0/1:3,1:5:39.35:39,0,41	0/0:5,0:5:9.03:0,9,109	0/0:6,0:6:18.06:0,18,217	0/0:11,0:11:27.08:0,27,326	0/0:5,0:6:14.88:0,15,159	0/0:10,0:9:8.36:0,8,39	0/0:0,0:8:22.73:0,23,112	0/1:7,1:9:54.18:126,0,54	0/1:6,1:8:24.17:110,0,24	0/1:6,1:6:27.16:87,0,27	0/0:3,0:3:3.01:0,3,36	0/0:12,0:12:15.54:0,16,83	0/1:5,0:5:0.37:0,0,0	0/0:10,0:11:26.91:0,27,309	0/1:9,6:16:53.45:288,0,53	0/1:7,8:16:6.11:381,0,6	0/1:11,6:19:6.11:350,0,6
chr10	70262623	.	AT	A	297.18	PASS	AB=0.683;AC=5;AF=0.089;AN=56;BaseQRankSum=8.627;DP=292;FS=6.536;HRun=1;HaplotypeScore=86.8603;InbreedingCoeff=-0.0508;MQ=73.42;MQ0=1;MQRankSum=-6.610;QD=4.37;ReadPosRankSum=-1.775;VQSLOD=-0.3997;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,8:14:24.41:75,0,24	0/0:2,0:2:3:0,3,26	0/0:6,0:6:15.27:0,15,145	0/1:13,0:11:25.02:25,0,135	0/1:3,16:19:9.45:159,0,9	0/0:19,0:19:57.19:0,57,881	0/0:8,0:8:21.07:0,21,335	0/0:28,0:27:77.36:0,77,931	0/0:2,0:2:3.90:0,4,50	0/0:16,0:16:48.15:0,48,718	0/0:15,0:15:39.13:0,39,584	0/0:4,0:4:9.91:0,10,124	0/0:4,0:4:9.03:0,9,144	0/0:6,0:6:18.06:0,18,288	0/0:12,0:12:35.91:0,36,529	0/0:6,0:6:15.94:0,16,232	0/1:5,5:9:28.54:48,0,29	0/0:8,0:8:7.09:0,7,18	0/0:11,0:11:33.09:0,33,443	0/0:6,0:6:12.02:0,12,137	0/0:7,0:6:18.04:0,18,232	0/0:1,0:1:3.01:0,3,48	0/1:3,9:12:7.90:105,0,8	0/0:3,3:6:0.24:0,0,9	0/0:11,0:11:30.99:0,31,468	0/0:18,0:18:39.92:0,40,455	0/0:15,0:15:39.05:0,39,435	0/0:13,0:13:39.05:0,39,436
chr10	70262625	.	ATATAT	A	1252.32	PASS	AB=0.612;AC=6;AF=0.107;AN=56;BaseQRankSum=8.022;DP=294;FS=9.248;HRun=0;HaplotypeScore=104.0188;InbreedingCoeff=0.3481;MQ=73.30;MQ0=1;MQRankSum=-7.201;QD=20.53;ReadPosRankSum=-2.542;VQSLOD=2.2028;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:5,8:13:0.53:285,0,1	0/0:2,0:2:3.01:0,3,77	0/0:6,0:6:13.59:0,14,230	0/0:13,0:11:1.37:0,1,263	0/1:4,16:20:16.57:542,0,17	0/0:19,0:19:57.19:0,57,1755	0/0:8,0:8:24.08:0,24,733	0/0:27,0:26:75.19:0,75,1918	0/0:3,0:3:9.03:0,9,175	0/0:15,0:15:45.15:0,45,1393	0/0:15,0:15:39.13:0,39,1132	0/0:4,0:4:12.04:0,12,260	0/0:4,0:4:9.03:0,9,300	0/0:7,0:7:21.07:0,21,637	0/0:12,0:12:36.12:0,36,1079	0/0:6,0:6:18.06:0,18,485	1/1:4,5:8:11.62:130,12,0	0/0:8,0:8:24.08:0,24,298	0/0:12,0:12:36.12:0,36,934	0/0:5,0:5:9.03:0,9,255	0/0:6,0:5:15.05:0,15,447	0/0:1,0:1:3.01:0,3,100	0/1:3,9:12:8.76:369,0,9	0/1:4,3:7:2.68:50,0,3	0/0:13,0:13:39.13:0,39,1048	0/0:17,0:17:42.14:0,42,993	0/0:17,0:17:39.13:0,39,1040	0/0:13,0:13:39.13:0,39,1083
chr10	70262652	.	CCTCTCTCTCTCTCTCT	C	886.59	PASS	AB=0.788;AC=5;AF=0.096;AN=52;BaseQRankSum=4.589;DP=379;FS=1.580;HRun=0;HaplotypeScore=174.1685;InbreedingCoeff=0.0073;MQ=64.59;MQ0=24;MQRankSum=-4.496;QD=13.43;ReadPosRankSum=1.165;VQSLOD=2.8233;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:3.48:0,3,189	0/0:5,0:5:10.28:0,10,507	0/0:25,0:10:3.01:0,3,96	./.	0/0:28,0:26:9.03:0,9,574	0/0:18,0:17:12.04:0,12,518	0/0:9,0:9:21.07:0,21,1226	0/0:26,0:25:12:0,12,315	0/0:8,0:7:15.52:0,16,951	0/0:22,0:22:36.12:0,36,1966	0/0:14,0:14:21.07:0,21,964	0/0:7,0:7:12.04:0,12,784	0/0:6,0:6:6.02:0,6,428	0/0:10,0:10:16.77:0,17,608	0/0:17,0:16:27.09:0,27,1629	0/0:7,0:7:6.02:0,6,247	0/0:13,0:10:12.04:0,12,570	0/0:12,0:9:18.06:0,18,824	0/1:11,0:14:20.70:254,0,21	0/1:4,3:7:0:0,0,0	0/1:8,0:7:18.95:33,0,19	0/0:5,0:4:9.50:0,10,612	./.	0/0:8,0:7:3.48:0,3,196	0/0:11,0:11:9.03:0,9,495	0/1:10,0:16:5.89:587,0,6	0/1:15,2:17:43.94:117,0,44	0/0:8,2:10:5.98:0,6,47
chr10	70262798	.	A	AATTGGCTC	7416.35	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.165;DP=502;FS=3.211;HRun=0;HaplotypeScore=141.8462;InbreedingCoeff=0.9706;MQ=88.79;MQ0=0;MQRankSum=-12.036;QD=86.24;ReadPosRankSum=-5.877;VQSLOD=3.4711;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,18:34:81.28:3191,81,0	0/0:2,0:2:6.02:0,6,163	0/0:26,0:26:60.17:0,60,1483	0/0:34,0:34:72.25:0,72,1873	1/1:3,12:17:42.14:1525,42,0	0/0:22,0:22:63.20:0,63,1619	0/0:23,0:23:60.21:0,60,1533	0/0:30,0:30:69.23:0,69,1730	0/0:19,0:19:51.18:0,51,1383	0/0:14,0:14:39.13:0,39,1008	0/0:12,0:12:36.12:0,36,971	0/0:14,0:14:42.14:0,42,1139	0/0:19,0:19:51.16:0,51,1326	0/0:15,0:15:39.13:0,39,1053	0/0:23,0:23:60.20:0,60,1572	0/0:22,0:22:66.23:0,66,1790	1/1:6,5:12:21.07:835,21,0	0/0:13,0:13:30.10:0,30,811	0/0:18,0:18:48.14:0,48,1242	0/0:10,0:10:30.10:0,30,813	0/0:25,0:25:66.23:0,66,1720	0/0:10,0:10:27.08:0,27,676	1/1:3,10:13:36.12:1386,36,0	1/1:7,1:10:15.05:479,15,0	0/0:15,0:15:39.13:0,39,1047	0/0:17,0:17:48:0,48,1238	0/0:21,0:21:63.22:0,63,1697	0/0:12,0:12:27.06:0,27,617
chr10	70263005	.	A	ACAAATACTTTT	8619.61	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=0.715;DP=591;FS=24.877;HRun=0;HaplotypeScore=184.5187;InbreedingCoeff=0.9974;MQ=73.26;MQ0=0;MQRankSum=-11.253;QD=90.73;ReadPosRankSum=-3.100;VQSLOD=2.4656;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,7:20:44.81:2036,45,0	0/0:8,0:8:24.07:0,24,718	0/0:22,0:22:42.14:0,42,1257	0/0:23,0:23:60.21:0,60,1850	1/1:12,15:27:51.18:2145,51,0	0/0:30,0:30:78.24:0,78,2475	0/0:15,0:15:36.12:0,36,1200	0/0:52,0:52:99:0,129,3773	0/0:18,0:18:42.14:0,42,1389	0/0:22,0:22:60.20:0,60,1949	0/0:18,0:18:51.17:0,51,1606	0/0:14,0:14:33.11:0,33,1084	0/0:35,0:35:99:0,99,3129	0/0:20,0:20:51.16:0,51,1640	0/0:25,0:25:69.22:0,69,2222	0/0:27,0:27:66.23:0,66,2113	1/1:10,5:15:33.11:1553,33,0	0/0:16,0:16:39.11:0,39,1214	0/0:20,0:20:48.15:0,48,1429	0/0:16,0:16:39.12:0,39,1213	0/0:19,0:19:42.14:0,42,1359	0/0:13,0:13:33.11:0,33,1033	1/1:10,7:19:45.15:2125,45,0	1/1:11,2:13:21.07:761,21,0	0/0:18,0:18:51.15:0,51,1606	0/0:21,0:21:45.15:0,45,1459	0/0:36,0:36:87.30:0,87,2805	0/0:8,0:8:21.07:0,21,708
chr10	70263103	.	A	AGTGTGTGT	9641.90	PASS	AB=0.642;AC=25;AF=0.446;AN=56;BaseQRankSum=2.577;DP=599;FS=0.404;HRun=0;HaplotypeScore=161.3127;InbreedingCoeff=0.8567;MQ=62.26;MQ0=4;MQRankSum=-7.660;QD=32.80;ReadPosRankSum=-0.727;VQSLOD=3.9497;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:24:32.96:298,33,0	1/1:4,2:6:6.02:249,6,0	0/0:38,0:20:18.59:0,19,349	0/0:22,0:16:6.02:0,6,82	1/1:17,0:27:44.17:435,44,0	0/0:20,0:20:39.13:0,39,999	0/0:20,0:21:42.13:0,42,1005	0/0:34,0:34:63.15:0,63,1416	0/0:21,0:22:39.12:0,39,926	0/0:17,0:17:36.07:0,36,716	0/0:19,0:19:48.16:0,48,1230	0/0:7,0:8:21.07:0,21,517	0/0:14,0:14:27.09:0,27,692	0/0:12,0:12:24.07:0,24,538	0/0:20,0:20:48.16:0,48,1205	0/0:28,0:28:66.18:0,66,1585	1/1:4,0:31:47.95:412,48,0	1/1:10,0:14:21.02:631,21,0	1/1:8,12:20:39.07:1184,39,0	1/1:14,11:28:30.10:1189,30,0	1/1:15,0:14:9.01:194,9,0	0/0:13,0:15:42.08:0,42,905	1/1:10,0:28:4.39:223,4,0	1/1:7,0:13:17.97:148,18,0	0/0:14,0:15:33.11:0,33,824	0/1:15,17:34:28.36:1394,0,28	1/1:21,23:44:72.19:2792,72,0	1/1:2,5:7:7.75:492,8,0
chr10	70263301	.	CG	C	578.08	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.461;DP=678;FS=5.694;HRun=2;HaplotypeScore=73.6900;InbreedingCoeff=0.9686;MQ=82.05;MQ0=0;MQRankSum=-1.258;QD=24.09;ReadPosRankSum=0.019;VQSLOD=3.0685;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,168,2329	1/1:0,14:14:32.61:427,33,0	0/0:31,0:31:62.96:0,63,889	0/0:28,0:28:63.56:0,64,878	0/0:34,0:34:87.17:0,87,1173	0/0:21,0:21:63.08:0,63,899	0/0:32,0:32:90.23:0,90,1251	0/0:27,0:27:78.20:0,78,1085	0/0:22,0:22:60.19:0,60,864	0/0:30,0:30:90.23:0,90,1256	0/0:21,0:21:63.19:0,63,882	0/0:19,0:19:54.11:0,54,751	0/0:18,0:18:54.14:0,54,727	0/0:19,0:19:57.11:0,57,769	0/0:30,0:30:87.24:0,87,1200	0/0:23,0:23:69.18:0,69,993	0/0:19,0:19:54.16:0,54,760	1/1:1,9:10:21.07:271,21,0	0/0:17,0:17:48.14:0,48,670	0/0:28,0:28:81.19:0,81,1140	0/0:32,0:32:96.30:0,96,1368	0/0:23,0:23:69.13:0,69,942	0/0:24,0:24:63.21:0,63,921	0/0:22,0:22:57.06:0,57,773	0/0:26,0:26:75.22:0,75,1045	0/0:24,0:24:72.24:0,72,1062	0/0:24,0:24:69.18:0,69,962	0/0:3,0:3:9.03:0,9,133
chr10	70263880	.	G	GA	268	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.420;DP=619;FS=20.109;HRun=7;HaplotypeScore=59.5504;InbreedingCoeff=0.9990;MQ=80.25;MQ0=0;MQRankSum=-2.733;QD=22.33;ReadPosRankSum=2.168;VQSLOD=2.1349;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.08:0,54,521	1/1:1,11:12:30.09:362,30,0	0/0:18,0:18:42.06:0,42,404	0/0:14,0:14:36.02:0,36,332	0/0:31,0:30:90.14:0,90,869	0/0:22,0:21:60.09:0,60,579	0/0:19,0:19:54.06:0,54,515	0/0:25,0:25:66.09:0,66,633	0/0:15,0:15:45.06:0,45,429	0/0:32,0:32:93.13:0,93,889	0/0:29,0:29:78.11:0,78,753	0/0:29,0:29:81.13:0,81,782	0/0:16,0:16:45.03:0,45,426	0/0:28,0:28:75.10:0,75,719	0/0:28,0:28:72.09:0,72,689	0/0:26,0:26:78.09:0,78,740	0/0:31,0:31:90.12:0,90,862	0/0:15,0:15:39.06:0,39,376	0/0:15,0:15:39.02:0,39,368	0/0:29,0:29:81.11:0,81,771	0/0:18,0:18:36:0,36,339	0/0:24,0:24:63.09:0,63,608	0/0:23,0:23:57.04:0,57,541	0/0:15,0:15:45.07:0,45,434	0/0:24,0:24:66.11:0,66,637	0/0:23,0:23:63.10:0,63,609	0/0:25,0:24:69.11:0,69,666	0/0:14,0:14:42.07:0,42,406
chr10	70264509	.	G	GCGTTCCCGGCAC	18610.44	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=1.475;DP=612;FS=0.374;HRun=0;HaplotypeScore=199.4202;InbreedingCoeff=0.9929;MQ=76.20;MQ0=0;MQRankSum=-15.780;QD=108.83;ReadPosRankSum=-3.838;VQSLOD=4.1480;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,13:30:60.03:2967,60,0	0/0:9,0:9:24.08:0,24,895	0/0:18,0:18:44.48:0,44,1362	0/0:12,0:12:30.10:0,30,1029	1/1:21,17:38:75.26:4038,75,0	0/0:31,0:31:76.53:0,77,3006	0/0:12,0:12:30.10:0,30,1104	1/1:32,3:39:99:4701,105,0	0/0:20,0:20:54.17:0,54,1897	0/0:24,0:24:66.23:0,66,2450	0/0:28,0:28:84.29:0,84,3003	0/0:22,0:22:60.21:0,60,2066	0/0:27,0:27:69.24:0,69,2506	0/0:14,0:14:36.12:0,36,1305	0/0:28,0:28:81.25:0,81,2738	0/0:22,0:22:60.18:0,60,2001	1/1:7,4:13:27.09:1532,27,0	1/1:7,3:10:24.07:1258,24,0	0/0:21,0:21:63.22:0,63,2265	0/0:35,0:35:90.27:0,90,3191	0/0:14,0:14:39.13:0,39,1455	0/0:20,0:20:60.21:0,60,2223	1/1:16,13:29:60.63:3082,61,0	1/1:9,3:11:24.08:1031,24,0	0/0:24,0:24:66.23:0,66,2286	0/0:29,0:29:87.30:0,87,3150	0/0:27,0:26:78.25:0,78,2808	0/0:4,0:4:12.04:0,12,362
chr10	70264594	.	A	AT	3071.56	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-7.543;DP=585;FS=1.870;HRun=7;HaplotypeScore=59.5453;InbreedingCoeff=0.9802;MQ=73.80;MQ0=0;MQRankSum=-1.225;QD=27.42;ReadPosRankSum=0.275;VQSLOD=4.3208;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,14:21:48.13:566,48,0	0/0:14,0:14:42.07:0,42,406	0/0:19,0:19:23.14:0,23,241	0/0:11,0:11:13.52:0,14,108	1/1:6,29:35:81.07:925,81,0	0/0:23,0:24:61.97:0,62,550	0/0:15,0:15:42.06:0,42,401	0/0:23,0:23:63.07:0,63,593	0/0:16,0:16:45.07:0,45,435	0/0:25,0:25:72.11:0,72,695	0/0:35,0:35:90.06:0,90,842	0/0:24,0:24:66.04:0,66,614	0/0:21,0:21:63.09:0,63,604	0/0:13,0:13:33.04:0,33,315	0/0:19,0:19:51.06:0,51,483	0/0:22,0:22:63.08:0,63,601	1/1:0,18:18:51.16:615,51,0	0/0:13,0:13:30.51:0,31,291	0/0:18,0:18:51.05:0,51,482	0/0:38,0:38:99:0,111,1046	0/0:16,0:16:36.06:0,36,348	0/0:22,0:22:59.58:0,60,573	1/1:3,26:29:72.14:850,72,0	1/1:0,9:9:24.07:290,24,0	0/0:28,0:28:84.03:0,84,782	0/0:24,0:24:66.08:0,66,626	0/0:30,0:30:90.11:0,90,857	0/0:3,0:3:9.01:0,9,87
chr10	70265441	.	AT	A	3687.67	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.887;DP=581;FS=2.095;HRun=9;HaplotypeScore=68.6088;InbreedingCoeff=0.9973;MQ=73.89;MQ0=0;MQRankSum=-2.587;QD=23.64;ReadPosRankSum=0.558;VQSLOD=4.5308;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:27:66.03:604,66,0	0/0:10,0:10:30.09:0,30,346	0/0:16,0:16:36.09:0,36,400	0/0:8,1:9:17.54:0,18,180	1/1:3,31:34:99:905,99,0	0/0:32,0:34:89.93:0,90,998	0/0:24,0:24:51.15:0,51,589	1/1:8,16:24:54.01:489,54,0	0/0:20,1:21:29.70:0,30,596	0/0:30,0:30:87.25:0,87,997	0/0:15,0:15:39.11:0,39,442	0/0:21,1:22:38.72:0,39,690	0/0:22,0:22:57.17:0,57,657	0/0:17,0:17:36.11:0,36,415	0/0:26,1:27:50.76:0,51,838	0/0:22,0:22:63.19:0,63,727	1/1:0,20:20:54.03:494,54,0	1/1:4,15:19:47.96:426,48,0	0/0:24,0:24:60.18:0,60,692	0/0:22,1:23:41.74:0,42,734	0/0:13,0:13:36.11:0,36,415	0/0:25,0:26:69.03:0,69,768	1/1:0,15:15:39.02:357,39,0	1/1:1,16:17:45.02:412,45,0	0/0:18,0:18:48.12:0,48,542	0/0:25,0:25:60.17:0,60,685	0/0:20,0:20:57.16:0,57,649	0/0:7,0:7:21.03:0,21,220
chr10	70265562	.	T	TC	1130.68	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.369;DP=615;FS=5.201;HRun=2;HaplotypeScore=59.3449;InbreedingCoeff=0.9696;MQ=73.09;MQ0=0;MQRankSum=-3.108;QD=34.26;ReadPosRankSum=2.176;VQSLOD=3.8714;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:42.09:0,42,492	0/0:5,0:5:15.05:0,15,184	0/0:12,0:12:27.02:0,27,285	0/0:10,0:10:15.61:0,16,214	0/0:32,0:32:90.22:0,90,1044	0/0:28,0:28:84.22:0,84,1011	0/0:21,0:21:60.09:0,60,709	0/0:31,0:31:60.90:0,61,405	0/0:20,0:20:60.13:0,60,675	0/0:32,0:32:96.28:0,96,1161	0/0:29,0:29:81.21:0,81,964	0/0:25,0:25:75.21:0,75,904	0/0:26,0:26:68.06:0,68,874	0/0:15,0:15:45.10:0,45,529	0/0:22,0:22:63.17:0,63,746	0/0:18,0:18:54.15:0,54,645	0/0:17,0:17:51.10:0,51,580	1/1:1,32:33:87.24:1226,87,0	0/0:28,0:28:69.18:0,69,808	0/0:36,0:36:99:0,101,1261	0/0:19,0:19:39:0,39,557	0/0:10,0:10:30.08:0,30,350	0/0:21,0:21:63.18:0,63,756	0/0:15,0:15:42.09:0,42,501	0/0:20,0:20:57.14:0,57,677	0/0:23,0:23:69.19:0,69,814	0/0:23,0:23:69.22:0,69,853	0/0:30,0:30:83.78:0,84,1022
chr10	70265564	.	C	CTT	806.77	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.767;DP=610;FS=0.705;HRun=9;HaplotypeScore=73.1074;InbreedingCoeff=0.9500;MQ=71.82;MQ0=0;MQRankSum=-0.932;QD=25.21;ReadPosRankSum=-5.032;VQSLOD=2.2533;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:14:38.83:0,39,395	0/0:5,0:5:15.04:0,15,160	0/0:11,0:11:27.03:0,27,272	0/0:9,0:9:11.70:0,12,151	0/0:30,0:30:72.16:0,72,766	0/0:28,0:29:80.92:0,81,842	0/0:20,0:20:54.07:0,54,549	1/1:9,21:32:72.35:902,72,0	0/0:20,0:20:42.06:0,42,447	0/0:32,0:32:90.22:0,90,958	0/0:28,0:28:78.16:0,78,821	0/0:25,0:25:72.18:0,72,766	0/0:25,0:26:66.08:0,66,741	0/0:15,0:16:41.81:0,42,427	0/0:22,0:22:57.11:0,57,599	0/0:18,0:18:48.11:0,48,511	0/0:17,0:17:39.02:0,39,395	0/0:32,0:32:61.53:0,62,201	0/0:26,0:26:57.09:0,57,591	0/0:37,0:38:99:0,99,1093	0/0:16,0:18:29.98:0,30,430	0/0:10,0:10:24.05:0,24,255	0/0:21,0:21:57.11:0,57,599	0/0:16,0:16:48.06:0,48,490	0/0:18,0:19:56.87:0,57,579	0/0:23,0:23:60.14:0,60,638	0/0:23,0:23:69.17:0,69,734	0/0:29,0:30:87.08:0,87,925
chr10	70266113	.	G	GTGACTGTGTTC	18267.27	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-0.791;DP=716;FS=8.317;HRun=0;HaplotypeScore=225.5053;InbreedingCoeff=0.9952;MQ=89.04;MQ0=0;MQRankSum=-16.777;QD=106.21;ReadPosRankSum=-3.678;VQSLOD=3.1327;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,9:19:42.07:2000,42,0	1/1:0,4:6:15.05:768,15,0	0/0:35,0:35:99:0,99,3272	0/0:26,0:26:68.75:0,69,1880	1/1:11,32:49:99:5138,111,0	0/0:28,0:28:84.29:0,84,2981	0/0:31,0:31:90.25:0,90,2770	1/1:20,4:26:78.25:3537,78,0	0/0:24,0:24:72.25:0,72,2547	0/0:33,0:33:99:0,99,3134	0/0:20,0:20:60.21:0,60,2162	0/0:29,0:29:87.30:0,87,3127	0/0:32,0:32:93.32:0,93,3227	0/0:27,0:27:81.26:0,81,2776	0/0:34,0:33:99:0,102,3646	0/0:23,0:23:69.24:0,69,2496	1/1:9,7:19:42.14:1931,42,0	1/1:4,3:8:17.99:703,18,0	0/0:21,0:21:63.22:0,63,1982	0/0:43,0:43:99:0,123,4256	0/0:36,0:36:99:0,108,3722	0/0:21,0:21:63.22:0,63,2160	1/1:11,15:30:65.98:2903,66,0	1/1:6,8:15:30.10:1287,30,0	0/0:16,0:16:48.15:0,48,1479	0/0:26,0:26:75.26:0,75,2597	0/0:32,0:31:87.30:0,87,3016	0/0:7,0:7:21.07:0,21,761
chr10	70266231	.	C	CCAAA	9808.68	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-10.445;DP=667;FS=11.289;HRun=0;HaplotypeScore=106.8765;InbreedingCoeff=0.9923;MQ=97.37;MQ0=0;MQRankSum=-6.133;QD=68.59;ReadPosRankSum=3.307;VQSLOD=7.0774;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:33:96.15:2378,96,0	0/0:9,0:9:24.08:0,24,465	0/0:40,0:40:99:0,114,2143	0/0:31,0:31:80.42:0,80,1474	1/1:2,17:19:54.09:1352,54,0	0/0:26,0:26:72.25:0,72,1395	0/0:20,0:20:54.16:0,54,1011	1/1:4,4:8:21.07:510,21,0	0/0:28,0:28:81.28:0,81,1560	0/0:32,0:32:93.29:0,93,1737	0/0:16,0:16:48.15:0,48,896	0/0:22,0:22:66.21:0,66,1230	0/0:41,0:41:99:0,114,2200	0/0:17,0:17:51.13:0,51,896	0/0:35,0:35:99:0,105,2026	0/0:26,0:26:75.26:0,75,1454	1/1:1,20:22:57.20:1539,57,0	0/0:11,0:11:27.09:0,27,523	0/0:20,0:20:54.17:0,54,962	0/0:18,0:18:54.19:0,54,1047	0/0:39,0:39:99:0,114,2128	0/0:19,0:19:54.18:0,54,1046	1/1:3,20:24:66.14:1672,66,0	1/1:2,34:37:90.27:2358,90,0	0/0:19,0:19:54.17:0,54,1014	0/0:23,0:23:69.22:0,69,1274	0/0:28,0:28:84.29:0,84,1628	0/0:4,0:4:12.04:0,12,232
chr10	70266505	.	C	CAT	10374.54	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=1.419;DP=662;FS=4.755;HRun=0;HaplotypeScore=82.4112;InbreedingCoeff=0.9951;MQ=76.28;MQ0=1;MQRankSum=-0.942;QD=48.48;ReadPosRankSum=1.299;VQSLOD=5.6467;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:39:99:1850,99,0	0/0:6,0:6:18.06:0,18,265	0/0:12,0:12:27.06:0,27,334	0/0:14,0:14:26.61:0,27,368	1/1:1,28:29:84.29:1528,84,0	0/0:28,0:28:78.26:0,78,1147	0/0:19,0:19:54.17:0,54,774	1/1:7,34:41:99:1947,111,0	0/0:23,0:23:66.21:0,66,951	0/0:32,0:32:96.32:0,96,1395	0/0:19,0:19:51.17:0,51,739	0/0:22,0:22:66.22:0,66,970	0/0:32,0:32:87.28:0,87,1248	0/0:26,0:26:78.22:0,78,1089	0/0:24,0:24:72.23:0,72,1039	0/0:11,0:11:27.08:0,27,378	1/1:1,18:20:51.17:952,51,0	1/1:1,26:27:72.25:1346,72,0	0/0:22,0:22:60.20:0,60,865	0/0:33,0:33:99:0,99,1414	0/0:30,0:29:84.26:0,84,1212	0/0:29,0:29:87.26:0,87,1239	1/1:0,31:31:78.27:1458,78,0	1/1:0,26:27:69.24:1292,69,0	0/0:22,0:22:66.22:0,66,972	0/0:25,0:25:72.24:0,72,1060	0/0:14,0:14:42.12:0,42,598	0/0:5,0:5:15.05:0,15,221
chr10	70267525	.	CT	C	836.36	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.650;DP=635;FS=0.788;HRun=2;HaplotypeScore=59.5784;InbreedingCoeff=0.9801;MQ=88.95;MQ0=0;MQRankSum=-3.342;QD=30.98;ReadPosRankSum=0.451;VQSLOD=3.1399;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1619	0/0:5,0:5:15.05:0,15,225	0/0:24,0:24:72.16:0,72,966	0/0:28,0:28:77.97:0,78,1074	0/0:24,0:24:69.23:0,69,1015	0/0:14,0:14:42.13:0,42,611	0/0:30,0:30:90.29:0,90,1328	0/0:28,0:28:78.26:0,78,1146	0/0:27,0:27:78.26:0,78,1168	0/0:26,0:26:78.26:0,78,1152	0/0:13,0:13:39.12:0,39,567	0/0:23,0:23:63.21:0,63,943	0/0:19,0:19:57.19:0,57,854	0/0:27,0:27:81.27:0,81,1214	0/0:32,0:32:96.31:0,96,1414	0/0:14,0:14:39.13:0,39,585	0/0:31,0:31:93.29:0,93,1365	1/1:0,27:27:72.23:931,72,0	0/0:11,0:11:33.11:0,33,488	0/0:19,0:19:57.19:0,57,853	0/0:38,0:38:99:0,114,1663	0/0:13,0:13:39.08:0,39,541	0/0:17,0:17:48.15:0,48,700	0/0:31,0:31:90.30:0,90,1345	0/0:15,0:15:42.14:0,42,629	0/0:27,0:27:75.25:0,75,1124	0/0:27,0:27:81.27:0,81,1194	0/0:7,0:7:21.07:0,21,313
chr10	70270061	.	CT	C	2787.08	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.597;DP=705;FS=12.490;HRun=10;HaplotypeScore=71.6977;InbreedingCoeff=0.9855;MQ=66.85;MQ0=2;MQRankSum=-2.030;QD=18.34;ReadPosRankSum=-0.237;VQSLOD=3.2298;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,33:40:83.95:729,84,0	0/0:2,0:15:25.42:0,25,129	0/0:31,0:21:29.53:0,30,347	0/0:21,2:15:17.01:0,17,165	1/1:8,35:43:99:885,102,0	0/0:25,0:25:65.22:0,65,750	0/0:17,1:18:25.08:0,25,505	0/0:40,0:40:79.04:0,79,1064	0/0:30,0:30:72.18:0,72,786	0/0:28,0:28:63.16:0,63,684	0/0:27,0:27:69.18:0,69,757	0/0:22,0:22:63.16:0,63,689	0/0:21,1:22:40.06:0,40,643	0/0:26,0:26:49.25:0,49,769	0/0:29,2:31:35.03:0,35,797	0/0:22,1:23:40.12:0,40,671	1/1:1,29:30:80.98:703,81,0	0/0:18,0:18:51.13:0,51,557	0/0:26,0:26:72.17:0,72,784	0/0:21,0:21:48.11:0,48,517	0/0:14,1:16:18.75:0,19,392	0/0:17,0:18:41.93:0,42,438	1/1:1,14:15:32.99:286,33,0	1/1:4,20:24:14.80:357,15,0	0/0:31,0:31:87.22:0,87,953	0/0:23,0:23:63.17:0,63,696	0/0:18,0:18:42.11:0,42,464	0/0:17,1:18:13.09:0,13,372
chr10	70270731	.	GA	G	448.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.648;DP=666;FS=0.703;HRun=9;HaplotypeScore=65.2822;InbreedingCoeff=0.7059;MQ=81.82;MQ0=1;MQRankSum=-0.982;QD=22.44;ReadPosRankSum=0.104;VQSLOD=4.3681;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.20:0,69,796	0/0:10,1:11:2.62:0,3,276	0/0:19,1:20:15.08:0,15,356	0/0:15,0:16:27.89:0,28,356	0/0:25,2:27:20.29:0,20,706	0/0:26,0:25:66.19:0,66,753	0/0:23,0:24:63.01:0,63,698	0/0:35,0:35:99:0,102,1162	0/0:28,0:28:78.21:0,78,882	0/0:23,2:25:2.16:0,2,515	0/0:27,0:27:78.18:0,78,869	0/0:27,0:27:72.21:0,72,831	0/0:26,0:26:69.14:0,69,763	0/0:21,0:21:57.15:0,57,642	0/0:22,0:22:51.15:0,51,589	0/0:34,1:35:65.80:0,66,1000	0/0:18,0:18:45.13:0,45,517	1/1:0,20:20:60.01:543,60,0	0/0:18,0:18:42.12:0,42,485	0/0:26,1:27:44.75:0,45,769	0/0:12,0:12:30.09:0,30,346	0/0:24,0:24:66.18:0,66,753	0/0:24,0:24:66.20:0,66,762	0/0:19,1:20:26.73:0,27,561	0/0:28,0:28:69.18:0,69,771	0/0:24,0:24:60.18:0,60,693	0/0:36,0:36:99:0,99,1133	0/0:19,0:20:54.14:0,54,604
chr10	70270826	.	AACAG	A	5914.58	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.858;DP=774;FS=7.585;HRun=0;HaplotypeScore=130.2616;InbreedingCoeff=0.9995;MQ=86.47;MQ0=0;MQRankSum=-2.554;QD=43.49;ReadPosRankSum=2.251;VQSLOD=5.2231;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:32:75.26:1318,75,0	0/0:16,0:16:45.15:0,45,1162	0/0:30,0:31:77.91:0,78,1755	0/0:21,0:21:48.16:0,48,1127	1/1:1,34:35:87.25:1499,87,0	0/0:26,0:26:78.27:0,78,1997	0/0:28,0:28:75.24:0,75,1869	0/0:31,0:31:72.24:0,72,1774	0/0:41,0:41:99:0,117,3013	0/0:42,0:42:99:0,120,3054	0/0:17,0:17:45.15:0,45,1129	0/0:38,0:38:99:0,108,2696	0/0:29,0:29:78.27:0,78,2005	0/0:24,0:24:72.23:0,72,1790	0/0:36,0:36:99:0,99,2543	0/0:29,0:29:78.27:0,78,2014	1/1:0,19:19:57.20:1015,57,0	0/0:21,0:21:57.20:0,57,1162	0/0:18,0:18:45.15:0,45,1156	0/0:17,0:17:48.16:0,48,1207	0/0:41,0:41:99:0,120,3038	0/0:22,0:22:60.21:0,60,1517	1/1:0,18:18:45.05:801,45,0	1/1:3,28:31:72.25:1282,72,0	0/0:28,0:28:78.27:0,78,1993	0/0:34,0:34:96.32:0,96,2429	0/0:40,0:40:99:0,111,2807	0/0:8,0:8:24.08:0,24,619
chr10	70271066	.	TG	T	5619.78	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.856;DP=705;FS=1.999;HRun=1;HaplotypeScore=84.0757;InbreedingCoeff=0.9988;MQ=80.13;MQ0=0;MQRankSum=-1.185;QD=36.73;ReadPosRankSum=4.477;VQSLOD=5.2563;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,53:53:99:1972,141,0	0/0:13,0:13:39.11:0,39,597	0/0:18,0:18:51.16:0,51,760	0/0:18,0:18:34.87:0,35,540	1/1:0,25:25:57.19:796,57,0	0/0:9,0:9:27.09:0,27,429	0/0:26,0:26:75.24:0,75,1168	0/0:33,0:33:90.31:0,90,1435	0/0:25,0:25:75.21:0,75,1168	0/0:30,0:30:90.30:0,90,1420	0/0:17,0:17:51.16:0,51,789	0/0:40,0:40:99:0,117,1845	0/0:30,0:30:90.31:0,90,1438	0/0:21,0:21:63.21:0,63,1007	0/0:30,0:30:90.31:0,90,1437	0/0:19,0:19:57.19:0,57,911	1/1:0,36:36:99:1468,105,0	0/0:18,0:18:54.18:0,54,863	0/0:36,0:36:99:0,108,1688	0/0:30,0:30:87.28:0,87,1365	0/0:41,0:41:99:0,123,1939	0/0:21,0:21:60.20:0,60,956	1/1:1,18:19:48.16:671,48,0	1/1:0,20:20:51.17:713,51,0	0/0:23,0:23:69.21:0,69,1078	0/0:26,0:26:78.26:0,78,1226	0/0:20,0:19:60.20:0,60,959	0/0:8,0:8:21.04:0,21,288
chr10	70271273	.	GT	G	5070.63	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=17.002;DP=668;FS=8.852;HRun=1;HaplotypeScore=98.9984;InbreedingCoeff=0.9997;MQ=84.69;MQ0=0;MQRankSum=-6.597;QD=35.96;ReadPosRankSum=1.814;VQSLOD=4.4243;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:66.15:892,66,0	0/0:16,0:16:48.16:0,48,767	0/0:28,0:28:81.24:0,81,1234	0/0:16,0:16:42.11:0,42,620	1/1:0,21:21:57.10:764,57,0	0/0:26,0:26:72.25:0,72,1150	0/0:20,0:20:57.16:0,57,862	1/1:0,15:11:33.10:443,33,0	0/0:20,0:20:57.19:0,57,908	0/0:35,0:35:99:0,102,1608	0/0:24,0:24:69.19:0,69,1025	0/0:26,0:26:72.23:0,72,1128	0/0:36,0:36:99:0,108,1722	0/0:29,0:29:87.30:0,87,1382	0/0:36,0:36:99:0,108,1724	0/0:21,0:21:63.17:0,63,937	1/1:0,21:20:57.19:791,57,0	1/1:0,10:10:27.05:353,27,0	0/0:17,0:17:48.15:0,48,744	0/0:24,0:24:72.22:0,72,1121	0/0:22,0:22:54.18:0,54,856	0/0:35,0:35:99:0,105,1661	1/1:0,24:24:72.24:1000,72,0	1/1:0,24:24:60.20:828,60,0	0/0:28,0:28:78.25:0,78,1216	0/0:35,0:35:99:0,102,1608	0/0:20,0:20:60.20:0,60,959	0/0:13,0:13:39.13:0,39,623
chr10	70271330	.	ATCTCTC	A	267.73	PASS	AB=0.990;AC=11;AF=0.367;AN=30;BaseQRankSum=1.614;DP=590;FS=0.000;HRun=0;HaplotypeScore=137.5808;InbreedingCoeff=0.2017;MQ=66.96;MQ0=15;MQRankSum=-1.121;QD=1.85;ReadPosRankSum=-0.247;VQSLOD=2.5414;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:6.40:0,6,68	0/0:10,0:9:2.99:0,3,23	./.	./.	./.	1/1:26,0:26:5.98:49,6,0	0/1:17,0:17:2.11:27,0,2	./.	0/0:15,0:13:3.01:0,3,95	0/0:32,0:32:2.37:0,2,8	./.	0/0:28,0:28:9.01:0,9,155	1/1:17,5:21:3.01:59,3,0	./.	0/0:19,0:22:1.55:0,2,4	0/1:19,0:19:12.96:46,0,13	0/0:18,0:16:3.76:0,4,17	1/1:7,0:7:5.89:57,6,0	./.	./.	./.	./.	0/0:15,0:15:2.90:0,3,16	./.	./.	1/1:21,0:22:3.01:42,3,0	0/1:30,0:31:32.06:95,0,32	./.
chr10	70271426	.	GTC	G	2115.53	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=11.778;DP=562;FS=14.397;HRun=0;HaplotypeScore=103.1715;InbreedingCoeff=0.8636;MQ=60.36;MQ0=17;MQRankSum=0.286;QD=20.34;ReadPosRankSum=-0.038;VQSLOD=3.2825;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,16:23:41.05:513,41,0	0/0:6,0:6:18.06:0,18,314	0/0:20,0:7:9.03:0,9,150	0/0:40,0:20:14.89:0,15,234	1/1:1,16:17:36.12:494,36,0	0/0:33,0:33:90.25:0,90,1471	0/0:25,0:25:60.18:0,60,997	0/0:23,0:14:12.36:0,12,280	0/0:16,0:16:39.13:0,39,685	0/0:25,0:25:69.21:0,69,1112	0/0:17,0:16:45.15:0,45,774	0/0:21,0:21:54.18:0,54,945	0/0:23,0:23:63.22:0,63,1111	0/0:19,0:19:51.17:0,51,888	0/0:24,0:24:65.71:0,66,1130	0/0:14,0:13:36.08:0,36,574	1/1:2,18:20:42.14:561,42,0	0/1:13,0:13:26.95:27,0,80	0/0:15,0:13:33.07:0,33,541	0/0:21,0:21:60.21:0,60,1053	0/0:22,0:22:53.92:0,54,891	0/0:19,0:19:57.19:0,57,953	1/1:0,11:11:21.07:288,21,0	1/1:3,15:18:30.10:412,30,0	0/0:16,0:16:36.03:0,36,547	0/0:26,0:26:78.04:0,78,1265	0/0:21,0:21:60.16:0,60,1025	0/0:10,0:10:30.01:0,30,406
chr10	70271454	.	GTC	G	1300.97	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.582;DP=660;FS=14.862;HRun=0;HaplotypeScore=114.8123;InbreedingCoeff=0.9244;MQ=61.51;MQ0=17;MQRankSum=-1.978;QD=7.93;ReadPosRankSum=-6.306;VQSLOD=0.7218;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:25:7.18:77,7,0	0/0:6,0:6:15.05:0,15,245	0/0:25,0:8:8.48:0,8,144	0/0:57,0:18:4.15:0,4,242	1/1:22,0:22:16.38:176,16,0	0/0:27,0:27:72.23:0,72,1150	0/0:29,1:30:60.20:0,60,959	1/1:9,23:28:60.11:706,60,0	0/0:18,0:18:39.10:0,39,586	0/0:27,0:27:43.63:0,44,1039	0/0:21,0:18:51.15:0,51,765	0/0:26,0:26:43.59:0,44,886	0/0:22,0:22:51.15:0,51,781	0/0:20,0:20:54.17:0,54,840	0/0:25,0:25:63.20:0,63,1001	0/0:18,0:18:48.16:0,48,771	1/1:25,0:25:11.60:103,12,0	1/1:3,0:15:17.04:84,17,0	0/0:16,0:12:27.09:0,27,437	0/0:28,0:28:81.26:0,81,1282	0/0:28,0:28:66.09:0,66,1049	0/0:25,0:25:72.25:0,72,1160	1/1:20,0:19:23.19:204,23,0	1/1:24,0:23:14.46:141,14,0	0/0:19,0:19:39.13:0,39,627	0/0:28,0:28:63.22:0,63,1022	0/0:23,0:23:60.20:0,60,951	0/0:7,0:7:12.04:0,12,196
chr10	70271824	.	C	CAA	8879.78	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-15.735;DP=740;FS=3.408;HRun=0;HaplotypeScore=83.6986;InbreedingCoeff=0.9997;MQ=89.35;MQ0=0;MQRankSum=-6.226;QD=54.15;ReadPosRankSum=0.239;VQSLOD=5.2822;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:24:66.23:1341,66,0	0/0:10,0:10:30.10:0,30,489	0/0:35,0:35:99:0,102,1601	0/0:25,0:25:63.20:0,63,951	1/1:1,33:35:99:2012,99,0	0/0:30,0:30:90.26:0,90,1383	0/0:15,0:15:45.15:0,45,734	1/1:1,23:29:84.24:1565,84,0	0/0:25,0:25:72.25:0,72,1173	0/0:35,0:35:99:0,105,1652	0/0:19,0:19:54.18:0,54,881	0/0:24,0:24:69.24:0,69,1125	0/0:32,0:32:93.32:0,93,1510	0/0:39,0:39:99:0,114,1832	0/0:33,0:33:96.33:0,96,1565	0/0:36,0:36:99:0,108,1754	1/1:1,20:23:54.19:1097,54,0	1/1:0,11:12:27.09:549,27,0	0/0:21,0:21:54.18:0,54,880	0/0:34,0:34:96.33:0,96,1565	0/0:33,0:33:93.32:0,93,1506	0/0:21,0:21:63.17:0,63,995	1/1:1,23:24:66.23:1341,66,0	1/1:0,17:17:48.16:975,48,0	0/0:25,0:25:75.26:0,75,1223	0/0:38,0:38:99:0,111,1810	0/0:35,0:35:99:0,102,1634	0/0:11,0:11:33.11:0,33,538
chr10	70272609	.	CA	C	5720.35	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=15.990;DP=721;FS=0.328;HRun=3;HaplotypeScore=84.6955;InbreedingCoeff=0.9963;MQ=86.35;MQ0=0;MQRankSum=-2.397;QD=34.88;ReadPosRankSum=3.246;VQSLOD=5.3479;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,46:47:99:1670,135,0	0/0:15,0:15:45.10:0,45,605	0/0:23,0:23:62.61:0,63,826	0/0:30,0:28:60.14:0,60,789	1/1:1,32:33:90.28:1113,90,0	0/0:21,0:21:60.20:0,60,864	0/0:25,0:25:75.24:0,75,1063	0/0:35,0:35:99:0,105,1480	0/0:16,0:16:48.16:0,48,691	0/0:30,0:30:87.29:0,87,1252	0/0:24,0:24:72.23:0,72,1009	0/0:23,0:23:69.23:0,69,994	0/0:27,0:27:81.27:0,81,1166	0/0:26,0:26:75.25:0,75,1066	0/0:21,0:21:60.20:0,60,863	0/0:25,0:25:75.25:0,75,1079	1/1:0,26:26:78.25:967,78,0	0/0:18,0:18:51.13:0,51,711	0/0:29,0:29:87.29:0,87,1237	0/0:24,0:24:72.23:0,72,1019	0/0:29,0:29:84.28:0,84,1210	0/0:26,0:26:78.23:0,78,1085	1/1:1,24:25:68.89:855,69,0	1/1:1,32:33:90.28:1116,90,0	0/0:21,0:21:63.21:0,63,907	0/0:31,0:31:93.30:0,93,1322	0/0:33,0:33:99:0,99,1419	0/0:5,0:5:15.05:0,15,216
chr10	70272619	.	CA	C	491.94	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.019;DP=732;FS=0.000;HRun=1;HaplotypeScore=104.9573;InbreedingCoeff=0.9453;MQ=87.13;MQ0=0;MQRankSum=-2.166;QD=30.75;ReadPosRankSum=1.864;VQSLOD=3.3632;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,2247	0/0:15,0:15:45.15:0,45,719	0/0:26,0:26:67.94:0,68,1072	0/0:29,0:28:75.16:0,75,1100	0/0:28,0:28:84.29:0,84,1327	0/0:22,0:22:63.21:0,63,1007	0/0:27,0:27:81.25:0,81,1246	0/0:29,0:29:87.27:0,87,1330	0/0:20,0:20:60.19:0,60,936	0/0:34,0:34:99:0,102,1611	0/0:21,0:21:63.21:0,63,1007	0/0:24,0:24:72.22:0,72,1096	0/0:27,0:27:81.28:0,81,1290	0/0:25,0:25:75.22:0,75,1149	0/0:22,0:22:66.23:0,66,1055	0/0:24,0:24:72.23:0,72,1127	0/0:29,0:29:87.30:0,87,1391	1/1:0,16:16:42.14:587,42,0	0/0:27,0:27:78.74:0,79,1246	0/0:28,0:28:84.27:0,84,1317	0/0:28,0:28:84.29:0,84,1332	0/0:26,0:26:78.27:0,78,1247	0/0:29,0:29:84.08:0,84,1240	0/0:33,0:33:93.32:0,93,1487	0/0:21,0:21:60.18:0,60,932	0/0:37,0:37:99:0,111,1774	0/0:33,0:33:99:0,99,1559	0/0:3,0:3:9.03:0,9,144
chr10	70273229	.	CA	C	4412.96	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=17.407;DP=845;FS=1.029;HRun=8;HaplotypeScore=112.4791;InbreedingCoeff=0.9966;MQ=78.10;MQ0=0;MQRankSum=-8.503;QD=24.38;ReadPosRankSum=-2.337;VQSLOD=3.3804;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,36:48:99:1153,123,0	1/1:1,12:13:36.06:346,36,0	0/0:18,0:18:32.81:0,33,325	0/0:25,0:25:17.93:0,18,439	1/1:2,35:37:90.12:859,90,0	0/0:28,0:28:81.08:0,81,956	0/0:45,0:45:99:0,120,1426	0/0:30,0:30:81.24:0,81,967	0/0:32,0:32:90.26:0,90,1076	0/0:35,0:36:93.09:0,93,1080	0/0:22,0:22:51.15:0,51,609	0/0:30,0:30:78.22:0,78,930	0/0:41,0:41:99:0,102,1209	0/0:34,0:34:96.29:0,96,1155	0/0:42,0:42:99:0,108,1284	0/0:34,0:34:96.26:0,96,1127	1/1:3,16:19:53.92:495,54,0	0/0:18,1:19:34.40:0,34,548	0/0:33,0:32:84.25:0,84,1004	0/0:25,0:25:55.52:0,56,676	0/0:49,0:49:99:0,138,1654	0/0:35,0:35:93.26:0,93,1098	1/1:4,24:28:81.07:765,81,0	1/1:6,30:36:84.09:794,84,0	0/0:21,0:21:63.17:0,63,747	0/0:28,0:28:78.22:0,78,922	0/0:31,0:31:72.66:0,73,833	0/0:6,0:6:18.06:0,18,217
chr10	70273271	.	A	AC	9362.77	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-2.419;DP=815;FS=0.000;HRun=0;HaplotypeScore=99.9476;InbreedingCoeff=0.9998;MQ=82.06;MQ0=0;MQRankSum=-7.137;QD=40.89;ReadPosRankSum=-1.616;VQSLOD=4.2748;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,45:45:99:1866,117,0	1/1:1,12:13:36.12:574,36,0	0/0:26,0:26:75.23:0,75,1021	0/0:21,0:21:63.16:0,63,839	1/1:1,35:36:81.25:1266,81,0	0/0:31,0:31:90.30:0,90,1257	0/0:42,0:42:99:0,123,1701	1/1:1,33:34:99:1557,99,0	0/0:31,0:31:93.29:0,93,1282	0/0:20,0:20:60.19:0,60,823	0/0:22,0:22:63.21:0,63,881	0/0:25,0:25:75.23:0,75,1026	0/0:30,0:30:90.30:0,90,1259	0/0:30,0:30:87.29:0,87,1215	0/0:33,0:33:96.27:0,96,1304	0/0:38,0:38:99:0,114,1575	1/1:1,22:23:63.21:1004,63,0	1/1:0,15:15:42.01:663,42,0	0/0:31,0:30:90.30:0,90,1252	0/0:27,0:27:81.27:0,81,1133	0/0:56,0:56:99:0,169,2330	0/0:34,0:34:99:0,102,1426	1/1:0,27:27:69.24:1101,69,0	1/1:3,33:36:84.25:1332,84,0	0/0:18,0:18:54.18:0,54,755	0/0:34,0:33:99:0,102,1395	0/0:28,0:28:84.23:0,84,1115	0/0:9,0:9:27.09:0,27,378
chr10	70273694	.	GCA	G	1176.36	PASS	AB=0.819;AC=38;AF=0.826;AN=46;BaseQRankSum=0.638;DP=528;FS=1.577;HRun=0;HaplotypeScore=82.5843;InbreedingCoeff=-0.1487;MQ=69.64;MQ0=11;MQRankSum=-0.162;QD=2.94;ReadPosRankSum=0.847;VQSLOD=1.5205;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:32:2.35:0,2,13	1/1:8,0:8:8.43:40,8,0	./.	./.	1/1:16,0:22:5.17:27,5,0	1/1:23,1:24:8.94:72,9,0	0/1:15,4:18:15.30:120,0,15	./.	0/1:12,1:15:27.87:76,0,28	1/1:16,0:16:2.99:25,3,0	1/1:15,0:15:2.94:18,3,0	0/1:18,1:19:10.14:84,0,10	0/1:13,4:18:29.11:94,0,29	1/1:14,5:18:3.01:32,3,0	1/1:17,6:23:11.98:116,12,0	0/1:8,6:15:25.95:141,0,26	1/1:13,0:17:14.04:81,14,0	1/1:12,0:17:5.68:28,6,0	1/1:15,1:15:4.82:37,5,0	1/1:17,0:17:4.82:37,5,0	0/1:23,4:26:14.32:26,0,14	1/1:16,2:18:6.01:64,6,0	1/1:7,0:8:2.84:14,3,0	1/1:18,0:24:8.52:42,9,0	1/1:19,1:21:5.85:46,6,0	./.	1/1:15,3:18:7.24:81,7,0	./.
chr10	70274022	.	G	GCCC	600.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.855;DP=696;FS=0.000;HRun=7;HaplotypeScore=131.3601;InbreedingCoeff=0.9038;MQ=71.35;MQ0=1;MQRankSum=-3.760;QD=37.51;ReadPosRankSum=-0.981;VQSLOD=2.0145;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:98.01:0,98,768	1/1:1,14:16:36.10:695,36,0	0/0:31,0:20:26.02:0,26,464	0/0:23,0:19:32.33:0,32,308	0/0:25,0:25:71.68:0,72,581	0/0:32,0:32:93.30:0,93,1269	0/0:24,0:24:63.17:0,63,829	0/0:29,0:29:51.11:0,51,695	0/0:26,0:26:72.19:0,72,963	0/0:36,0:36:99:0,99,1349	0/0:22,0:22:57.15:0,57,761	0/0:27,0:27:75.21:0,75,990	0/0:30,0:30:78.25:0,78,1063	0/0:21,0:21:60.18:0,60,803	0/0:27,0:27:72.22:0,72,982	0/0:22,0:22:57.17:0,57,777	0/0:30,0:30:77.64:0,78,620	0/0:22,0:22:56.24:0,56,737	0/0:18,0:18:48.16:0,48,654	0/0:25,0:25:69.21:0,69,941	0/0:17,0:17:39.10:0,39,516	0/0:26,0:26:72.23:0,72,977	0/0:15,0:15:41.90:0,42,338	0/0:26,0:26:65.86:0,66,535	0/0:25,0:25:69.18:0,69,905	0/0:25,0:25:63.20:0,63,860	0/0:32,0:32:87.27:0,87,1187	0/0:3,0:3:6.02:0,6,82
chr10	70274028	.	C	CA	3803.49	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.765;DP=723;FS=8.885;HRun=0;HaplotypeScore=96.4615;InbreedingCoeff=0.9640;MQ=71.80;MQ0=1;MQRankSum=0.396;QD=26.23;ReadPosRankSum=4.218;VQSLOD=4.2429;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,38:41:93.63:1085,94,0	0/0:15,0:15:28.22:0,28,115	0/0:33,0:21:14.95:0,15,457	0/0:31,0:23:22.63:0,23,267	1/1:2,24:27:68.55:759,69,0	0/0:36,0:36:99:0,102,1364	0/0:25,0:25:71.01:0,71,905	0/0:27,0:27:78.15:0,78,946	0/0:26,0:26:78.21:0,78,1044	0/0:35,0:35:99:0,102,1397	0/0:24,0:24:72.01:0,72,881	0/0:28,0:28:81.24:0,81,1084	0/0:28,0:28:84.26:0,84,1138	0/0:22,0:22:60.11:0,60,812	0/0:30,0:30:87.21:0,87,1129	0/0:22,0:22:63.19:0,63,845	1/1:4,28:34:60.61:797,61,0	0/0:23,1:24:11.59:0,12,284	0/0:19,0:19:51.16:0,51,693	0/0:27,0:27:75.23:0,75,1012	0/0:16,0:16:48.08:0,48,606	0/0:26,0:26:78.23:0,78,1049	1/1:1,15:16:37.74:443,38,0	1/1:2,25:27:63.65:721,64,0	0/0:25,0:25:69.23:0,69,955	0/0:25,0:25:75.22:0,75,988	0/0:32,0:32:93.28:0,93,1261	0/0:2,0:2:6.02:0,6,84
chr10	70274522	.	T	TTC	557.48	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.297;DP=672;FS=6.868;HRun=0;HaplotypeScore=81.3190;InbreedingCoeff=0.9633;MQ=77.23;MQ0=0;MQRankSum=-1.801;QD=32.79;ReadPosRankSum=-0.397;VQSLOD=5.6115;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:71.24:0,71,1053	0/0:12,0:12:24.08:0,24,306	0/0:17,0:17:12.71:0,13,299	0/0:25,0:24:29.80:0,30,307	0/0:28,0:28:72.20:0,72,890	0/0:33,0:33:90.27:0,90,1132	0/0:22,0:22:54.15:0,54,661	0/0:29,0:29:72.19:0,72,888	0/0:20,0:20:57.18:0,57,726	0/0:34,0:34:81.25:0,81,1009	0/0:22,0:22:57.16:0,57,699	0/0:26,0:26:60.19:0,60,764	0/0:37,0:37:99:0,99,1246	0/0:20,0:20:51.14:0,51,624	0/0:31,0:31:84.26:0,84,1058	0/0:25,0:25:72.22:0,72,903	0/0:26,0:26:72.23:0,72,917	1/1:0,17:17:39.13:652,39,0	0/0:30,0:30:66.21:0,66,840	0/0:26,0:27:78.08:0,78,969	0/0:14,0:14:42.12:0,42,522	0/0:17,0:17:51.16:0,51,649	0/0:27,0:27:69.21:0,69,865	0/0:10,0:10:27.08:0,27,331	0/0:25,0:25:72.21:0,72,895	0/0:32,0:32:87.27:0,87,1097	0/0:29,0:29:87.26:0,87,1082	0/0:6,0:6:18.06:0,18,229
chr10	70275942	.	A	AAC	13060.82	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-18.639;DP=830;FS=4.098;HRun=0;HaplotypeScore=97.2050;InbreedingCoeff=0.9948;MQ=84.49;MQ0=1;MQRankSum=-7.873;QD=48.55;ReadPosRankSum=1.905;VQSLOD=5.7457;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,49:51:99:2530,138,0	1/1:0,12:12:36.12:660,36,0	0/0:15,0:15:42.10:0,42,544	0/0:36,0:36:92.48:0,92,1156	1/1:0,21:21:54.18:970,54,0	0/0:20,0:20:57.19:0,57,817	0/0:31,0:31:84.27:0,84,1186	1/1:4,35:39:99:1919,108,0	0/0:27,0:27:78.26:0,78,1118	0/0:22,0:22:63.21:0,63,903	0/0:18,0:18:51.16:0,51,714	0/0:38,0:38:99:0,111,1570	0/0:37,0:37:99:0,111,1570	0/0:39,0:39:99:0,111,1591	0/0:38,0:38:99:0,108,1498	0/0:34,0:34:96.29:0,96,1339	1/1:2,43:44:99:2144,117,0	1/1:1,18:19:51.17:935,51,0	0/0:22,0:22:60.19:0,60,843	0/0:32,0:32:96.29:0,96,1336	0/0:37,0:37:99:0,105,1487	0/0:20,0:20:54.17:0,54,756	1/1:2,20:23:60.21:1097,60,0	1/1:2,56:59:99:2805,154,0	0/0:25,0:25:75.24:0,75,1057	0/0:32,1:33:44.30:0,44,1320	0/0:27,0:27:78.26:0,78,1118	0/0:10,0:10:12.04:0,12,172
chr10	70276342	.	ATGTGTG	A	628.44	PASS	AB=0.786;AC=11;AF=0.204;AN=54;BaseQRankSum=3.784;DP=679;FS=7.413;HRun=0;HaplotypeScore=184.4392;InbreedingCoeff=0.6997;MQ=56.33;MQ0=13;MQRankSum=-4.548;QD=4.55;ReadPosRankSum=-0.940;VQSLOD=1.8742;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,4:21:17.19:89,0,17	./.	0/0:34,0:18:11.72:0,12,197	0/0:24,0:13:12.04:0,12,201	1/1:13,26:38:0.41:1,0,0	0/0:29,0:29:56.88:0,57,1446	0/0:24,0:24:57.18:0,57,1511	1/1:29,0:32:29.37:319,29,0	0/0:16,0:16:27.09:0,27,713	0/0:26,0:27:63.19:0,63,1541	0/0:23,0:25:51.65:0,52,1506	0/0:20,0:21:30.08:0,30,864	0/0:28,0:29:48.04:0,48,1104	0/0:18,0:18:36.12:0,36,969	0/0:38,0:38:60.16:0,60,1634	0/0:22,0:22:32.62:0,33,870	1/1:12,6:17:18.01:325,18,0	1/1:5,0:6:2.92:17,3,0	0/0:19,0:18:33.11:0,33,793	0/0:30,0:32:53.87:0,54,1786	0/0:38,0:37:65.78:0,66,1766	0/0:13,0:13:30.10:0,30,804	0/0:7,9:15:2.74:0,3,12	1/1:10,11:20:3.44:22,3,0	0/0:25,0:26:66.21:0,66,1700	0/0:32,0:32:59.99:0,60,1641	0/0:23,0:27:57.64:0,58,1358	0/0:11,0:13:30.10:0,30,751
chr10	70277087	.	GTGT	G	128.71	PASS	AB=0.960;AC=5;AF=0.096;AN=52;BaseQRankSum=4.955;DP=503;FS=0.000;HRun=0;HaplotypeScore=62.3147;InbreedingCoeff=0.6526;MQ=36.72;MQ0=77;MQRankSum=-0.577;QD=3.48;ReadPosRankSum=0.268;VQSLOD=1.5421;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:18:24:0,24,399	1/1:1,5:6:15.05:209,15,0	./.	./.	0/0:33,0:31:51.09:0,51,861	0/0:15,0:9:15.05:0,15,289	0/0:8,0:7:9.03:0,9,179	0/0:29,0:17:18.06:0,18,356	0/0:12,0:10:21.54:0,22,419	0/0:21,0:20:42.14:0,42,733	0/0:20,0:20:10.17:0,10,489	0/0:18,0:13:27.01:0,27,458	0/0:12,0:10:21.07:0,21,417	0/0:18,0:17:32.88:0,33,641	0/0:17,0:16:18.20:0,18,696	0/0:16,0:15:30.10:0,30,598	0/0:14,0:12:27.09:0,27,507	1/1:6,0:3:2.98:21,3,0	0/1:23,1:20:5.71:6,0,622	0/0:31,0:31:66.23:0,66,1268	0/0:13,0:11:27.09:0,27,516	0/0:13,0:12:24.08:0,24,473	0/0:22,0:21:33.11:0,33,658	0/0:17,0:12:24.08:0,24,478	0/0:21,0:21:35.99:0,36,613	0/0:23,1:22:18.37:0,18,1039	0/0:29,1:27:15.38:0,15,1018	0/0:12,0:7:18.06:0,18,359
chr10	70277485	.	CA	C	848.76	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.223;DP=671;FS=3.557;HRun=5;HaplotypeScore=68.0736;InbreedingCoeff=0.9998;MQ=85.11;MQ0=0;MQRankSum=-1.522;QD=29.27;ReadPosRankSum=-4.604;VQSLOD=1.8590;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:36:99:0,105,1382	0/0:12,0:12:36.12:0,36,489	0/0:24,0:24:65.57:0,66,827	0/0:23,0:23:64.99:0,65,817	0/0:28,0:28:81.26:0,81,1091	0/0:20,0:20:57.19:0,57,779	0/0:26,0:26:72.24:0,72,985	1/1:1,28:29:84.23:944,84,0	0/0:22,0:22:63.21:0,63,862	0/0:22,0:22:63.20:0,63,848	0/0:30,0:30:90.15:0,90,1141	0/0:15,0:15:45.14:0,45,598	0/0:32,0:32:96.31:0,96,1297	0/0:22,0:22:57.17:0,57,758	0/0:19,0:19:51.16:0,51,682	0/0:29,0:29:81.27:0,81,1108	0/0:22,0:22:60.19:0,60,805	0/0:16,0:16:48.16:0,48,656	0/0:14,0:14:39.12:0,39,519	0/0:33,0:33:99:0,99,1353	0/0:32,0:32:93.25:0,93,1220	0/0:19,0:19:54.18:0,54,734	0/0:24,0:24:69.21:0,69,926	0/0:23,0:23:66.21:0,66,888	0/0:20,0:20:60.20:0,60,821	0/0:27,0:27:75.25:0,75,1025	0/0:34,0:34:96.30:0,96,1295	0/0:18,0:18:51.15:0,51,679
chr10	70277866	.	AT	A	4138.05	PASS	AB=0.913;AC=17;AF=0.304;AN=56;BaseQRankSum=12.012;DP=666;FS=4.514;HRun=10;HaplotypeScore=70.3748;InbreedingCoeff=0.9116;MQ=73.89;MQ0=1;MQRankSum=-1.791;QD=18.72;ReadPosRankSum=1.858;VQSLOD=4.5717;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:30:74.98:651,75,0	1/1:3,6:9:17.99:156,18,0	0/1:19,2:21:17.05:17,0,280	0/0:12,0:11:29.10:0,29,299	1/1:1,34:36:97.99:838,98,0	0/0:27,1:28:49.14:0,49,760	0/0:25,0:25:63.17:0,63,697	1/1:9,27:36:80.64:702,81,0	0/0:16,0:16:45.12:0,45,497	0/0:31,0:31:77.94:0,78,836	0/0:25,1:27:48.98:0,49,751	0/0:28,1:30:54.99:0,55,811	0/0:17,0:17:48.13:0,48,531	0/0:20,0:22:30.95:0,31,547	0/0:23,0:23:66.18:0,66,730	0/0:24,0:24:63.14:0,63,677	1/1:2,23:25:62.99:547,63,0	1/1:1,13:14:38.99:339,39,0	0/0:23,0:23:60.15:0,60,657	0/0:28,0:28:75.16:0,75,816	0/0:20,0:20:42.11:0,42,464	0/0:20,0:20:57.15:0,57,630	1/1:4,30:34:71.94:646,72,0	1/1:3,13:16:13.23:241,13,0	0/0:30,0:30:75.20:0,75,829	0/0:26,0:26:72.19:0,72,796	0/0:31,1:32:62.43:0,62,904	0/0:11,0:11:33.09:0,33,365
chr10	70278627	.	GTGTA	G	3165.73	PASS	AB=0.952;AC=20;AF=0.370;AN=54;BaseQRankSum=13.097;DP=995;FS=7.142;HRun=0;HaplotypeScore=180.4792;InbreedingCoeff=0.3707;MQ=56.53;MQ0=11;MQRankSum=1.155;QD=7.54;ReadPosRankSum=0.958;VQSLOD=1.6267;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:40:42.51:602,43,0	1/1:13,0:13:20.72:169,21,0	./.	0/0:50,0:30:5.98:0,6,68	1/1:36,0:36:39.12:590,39,0	0/0:29,0:30:42.14:0,42,919	0/1:32,0:32:13.63:14,0,637	0/0:43,0:40:12.04:0,12,209	0/1:32,2:34:48.71:49,0,827	0/0:49,1:50:19.30:0,19,1264	0/0:23,0:23:42.14:0,42,927	0/0:42,0:42:63.20:0,63,1392	0/1:41,2:43:15.59:16,0,1503	0/0:39,0:39:13.28:0,13,1201	0/0:38,1:39:16.30:0,16,1280	0/0:45,0:45:93.29:0,93,2012	1/1:19,0:19:33.11:515,33,0	0/1:17,1:18:13.80:14,0,619	0/0:25,0:21:17.95:0,18,371	0/0:45,0:45:81.21:0,81,1780	0/1:47,4:51:21.65:22,0,1352	0/1:27,1:28:1.90:2,0,885	1/1:25,0:25:24.07:347,24,0	1/1:37,0:36:63.18:938,63,0	0/1:26,2:27:39.73:40,0,850	0/0:48,0:48:47.03:0,47,2003	0/0:36,0:36:13.43:0,13,1239	0/1:15,1:16:37.89:38,0,133
chr10	70278660	.	TGTATGTA	T	372.13	PASS	AB=0.934;AC=4;AF=0.071;AN=56;BaseQRankSum=13.297;DP=869;FS=8.236;HRun=0;HaplotypeScore=230.9961;InbreedingCoeff=0.1417;MQ=61.98;MQ0=5;MQRankSum=-1.456;QD=3.68;ReadPosRankSum=3.956;VQSLOD=1.4776;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:16.86:0,17,317	0/1:9,4:13:0.22:363,0,0	0/0:35,0:27:78.25:0,78,1075	0/0:31,0:20:57.18:0,57,896	0/1:32,1:33:78.01:78,0,335	0/0:25,0:25:67.47:0,67,2080	0/0:27,0:27:75.25:0,75,1987	0/0:50,0:48:99:0,141,1650	0/0:25,0:25:69.19:0,69,2008	0/0:46,0:46:99:0,132,3624	0/0:28,0:28:84.12:0,84,2384	0/0:40,0:40:99:0,111,3199	0/0:47,0:47:99:0,138,3992	0/0:35,0:35:99:0,105,3000	0/0:36,0:36:99:0,108,3121	0/0:40,0:40:99:0,120,4178	0/1:19,0:19:21.97:22,0,126	0/0:17,0:17:42.13:0,42,1371	0/0:11,0:11:33.11:0,33,948	0/0:37,0:37:99:0,111,3708	0/0:44,0:44:99:0,120,3503	0/0:25,0:25:75.23:0,75,2297	0/0:28,0:28:35.21:0,35,393	0/1:36,0:36:17.38:17,0,149	0/0:29,0:27:78.25:0,78,2260	0/0:45,0:45:99:0,135,4443	0/0:31,0:31:93.31:0,93,2827	0/0:3,0:3:9.02:0,9,279
chr10	70278662	.	TA	T	716.82	PASS	AB=0.700;AC=5;AF=0.089;AN=56;BaseQRankSum=12.905;DP=865;FS=7.022;HRun=1;HaplotypeScore=125.3332;InbreedingCoeff=-0.1038;MQ=62.51;MQ0=5;MQRankSum=-0.861;QD=5.05;ReadPosRankSum=3.137;VQSLOD=0.5487;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,12:30:99:145,0,232	0/0:13,0:13:9.16:0,9,100	0/0:35,0:27:78.26:0,78,1127	0/0:33,0:21:57.19:0,57,839	0/1:18,14:32:99:185,0,186	0/0:24,1:25:66.22:0,66,1008	0/0:27,0:27:73.10:0,73,1069	0/0:50,0:48:99:0,141,1427	0/0:23,0:23:59.66:0,60,876	0/0:42,0:42:99:0,125,1877	0/0:29,0:29:86.51:0,87,1301	0/0:40,0:40:99:0,111,1680	0/0:47,0:47:99:0,135,2030	0/0:37,0:37:99:0,107,1616	0/0:37,0:37:99:0,107,1601	0/0:42,0:42:99:0,126,1930	0/1:7,11:18:99:143,0,119	0/0:17,0:17:40.38:0,40,616	0/0:12,0:12:36.12:0,36,553	0/0:38,0:38:99:0,114,1740	0/0:44,0:44:99:0,117,1749	0/0:24,0:24:70.48:0,70,1078	0/1:19,7:26:90.78:91,0,209	0/1:19,17:36:99:271,0,113	0/0:29,0:27:74.74:0,75,1125	0/0:45,0:45:99:0,132,2029	0/0:31,0:31:91.55:0,92,1392	0/0:3,0:3:7.27:0,7,99
chr10	70278664	.	TGTA	T	1782.36	PASS	AB=0.698;AC=7;AF=0.125;AN=56;BaseQRankSum=15.631;DP=860;FS=13.772;HRun=0;HaplotypeScore=153.3356;InbreedingCoeff=0.0277;MQ=63.25;MQ0=5;MQRankSum=0.166;QD=11.57;ReadPosRankSum=3.769;VQSLOD=2.8223;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,12:29:80.27:340,0,80	1/1:13,0:13:0.38:148,0,0	0/0:33,0:26:78.21:0,78,982	0/0:31,0:21:57.18:0,57,753	0/1:16,14:30:92.70:386,0,93	0/0:26,0:26:69.22:0,69,1348	0/0:25,0:25:55.69:0,56,1259	0/0:51,0:50:99:0,140,1005	0/0:28,0:28:61.03:0,61,1387	0/0:41,0:41:99:0,115,2322	0/0:28,0:28:84.27:0,84,1585	0/0:40,0:40:99:0,111,2183	0/0:47,0:47:99:0,121,2572	0/0:37,0:37:99:0,103,2040	0/0:38,0:38:99:0,103,2063	0/0:40,0:40:99:0,120,2614	0/1:7,11:18:40.50:296,0,41	0/0:17,0:17:33.55:0,34,843	0/0:13,0:13:39.13:0,39,696	0/0:37,0:37:99:0,108,2319	0/0:45,0:45:99:0,106,2268	0/0:23,0:23:60.64:0,61,1367	0/1:19,7:26:99:169,0,118	0/1:21,17:38:52.82:569,0,53	0/0:29,0:27:61.06:0,61,1424	0/0:43,0:43:99:0,121,2713	0/0:31,0:31:84.85:0,85,1824	0/0:3,0:3:0.43:0,0,140
chr10	70279183	.	TC	T	4054.31	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.357;DP=664;FS=5.435;HRun=8;HaplotypeScore=68.3564;InbreedingCoeff=0.9793;MQ=89.56;MQ0=0;MQRankSum=-3.420;QD=22.91;ReadPosRankSum=3.804;VQSLOD=4.3520;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,36:44:99:1042,108,0	1/1:1,10:11:30.04:289,30,0	0/0:29,0:29:63.15:0,63,712	0/0:21,0:21:38.26:0,38,475	1/1:3,18:21:51.08:492,51,0	0/0:18,0:18:45.11:0,45,528	0/0:33,0:33:84.24:0,84,1001	0/0:21,0:21:45.14:0,45,544	0/0:15,0:15:38.85:0,39,449	0/0:30,0:30:81.22:0,81,962	0/0:14,0:14:42.13:0,42,507	0/0:34,0:34:96.29:0,96,1157	0/0:26,0:26:70.75:0,71,827	0/0:29,0:29:84.23:0,84,991	0/0:29,0:29:75.23:0,75,906	0/0:25,0:25:66.18:0,66,775	1/1:3,29:32:81.60:783,82,0	1/1:3,21:24:54.08:521,54,0	0/0:27,1:27:40.16:0,40,740	0/0:3,0:3:6.02:0,6,72	0/0:36,0:36:96.15:0,96,1129	0/0:15,0:15:39.11:0,39,459	1/1:2,10:12:27.04:260,27,0	1/1:5,28:33:69.10:666,69,0	0/0:22,0:22:60.18:0,60,725	0/0:25,0:25:66.20:0,66,788	0/0:26,0:26:78.23:0,78,930	0/0:8,0:8:18.06:0,18,217
chr10	70279479	.	GTC	G	924.58	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=6.749;DP=792;FS=1.145;HRun=0;HaplotypeScore=143.9862;InbreedingCoeff=0.7092;MQ=64.59;MQ0=2;MQRankSum=-1.364;QD=11.28;ReadPosRankSum=-2.826;VQSLOD=2.8137;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:10.74:11,0,78	1/1:2,12:14:36.10:413,36,0	0/0:45,0:36:80.96:0,81,1166	0/0:41,0:33:59.51:0,60,868	0/0:34,0:34:3.35:0,3,72	0/0:28,0:27:67.92:0,68,1329	0/0:26,0:26:45.44:0,45,947	1/1:38,0:38:66.29:628,66,0	0/0:24,0:24:57.15:0,57,909	0/0:51,0:51:99:0,138,2262	0/0:17,0:17:51.13:0,51,790	0/0:29,0:29:84.27:0,84,1421	0/0:20,0:20:59.91:0,60,946	0/0:29,0:29:78.23:0,78,1265	0/0:37,0:37:99:0,102,1670	0/0:28,0:28:75.19:0,75,1200	0/0:24,0:24:23.77:0,24,99	0/0:15,0:15:10.03:0,10,22	0/0:16,0:16:48.12:0,48,735	0/0:25,0:25:55.44:0,55,974	0/0:45,0:45:99:0,115,2039	0/0:21,0:21:63.19:0,63,1023	0/0:26,0:26:12.89:0,13,110	0/0:20,0:20:13.27:0,13,48	0/0:28,0:28:84.26:0,84,1427	0/0:40,0:40:99:0,108,1626	0/0:27,0:27:81.22:0,81,1311	0/0:13,0:13:33.11:0,33,559
chr10	70279483	.	C	CTGTG	3428.53	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.603;DP=808;FS=1.649;HRun=0;HaplotypeScore=170.0231;InbreedingCoeff=0.9416;MQ=64.88;MQ0=2;MQRankSum=-7.490;QD=22.71;ReadPosRankSum=-2.377;VQSLOD=2.9896;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:31:42.55:833,43,0	0/0:17,0:17:39.73:0,40,355	0/0:45,0:35:96:0,96,1532	0/0:45,0:34:61.51:0,62,1147	1/1:7,21:31:21.02:509,21,0	0/0:28,0:27:81.28:0,81,1599	0/0:30,0:30:79.45:0,79,1403	0/0:34,0:34:16.69:0,17,470	0/0:22,0:22:57.18:0,57,1078	0/0:51,0:51:99:0,142,2600	0/0:17,0:17:51.17:0,51,974	0/0:29,0:29:87.28:0,87,1681	0/0:21,0:21:63.19:0,63,1199	0/0:30,0:30:81.24:0,81,1501	0/0:35,0:35:99:0,102,1962	0/0:28,0:28:75.24:0,75,1425	1/1:1,22:26:1.12:594,1,0	1/1:1,0:15:30.08:350,30,0	0/0:18,0:18:51.13:0,51,897	0/0:27,0:27:77.42:0,77,1345	0/0:49,0:49:99:0,147,2591	0/0:23,0:23:69.22:0,69,1310	1/1:4,20:27:39.07:845,39,0	1/1:4,14:21:11.42:297,11,0	0/0:28,0:28:84.27:0,84,1632	0/0:41,0:41:99:0,117,2073	0/0:28,0:28:84.24:0,84,1546	0/0:11,0:11:33.11:0,33,650
chr10	70279527	.	TC	T	512.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.930;DP=787;FS=1.949;HRun=2;HaplotypeScore=124.9532;InbreedingCoeff=0.9983;MQ=70.28;MQ0=2;MQRankSum=-3.312;QD=26.99;ReadPosRankSum=0.024;VQSLOD=3.2571;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:87.09:0,87,1155	1/1:2,17:19:48.14:608,48,0	0/0:45,0:41:99:0,110,1446	0/0:43,1:36:73.34:0,73,1120	0/0:21,0:21:39.13:0,39,583	0/0:29,0:29:87.27:0,87,1256	0/0:25,0:25:75.22:0,75,1061	0/0:33,0:33:93.31:0,93,1371	0/0:25,0:25:75.21:0,75,1099	0/0:45,0:44:99:0,132,1933	0/0:19,0:19:57.19:0,57,849	0/0:34,0:34:99:0,102,1488	0/0:31,0:31:93.29:0,93,1370	0/0:26,0:26:78.22:0,78,1125	0/0:37,0:37:99:0,108,1618	0/0:28,0:28:84.25:0,84,1201	0/0:24,0:24:57.02:0,57,745	0/0:23,0:23:57.19:0,57,850	0/0:9,0:9:27.09:0,27,405	0/0:21,0:21:63.21:0,63,944	0/0:46,0:46:99:0,135,2001	0/0:14,0:14:39.13:0,39,582	0/0:21,0:21:39.13:0,39,583	0/0:27,0:27:47.94:0,48,665	0/0:36,0:36:99:0,105,1554	0/0:29,0:29:87.27:0,87,1255	0/0:29,0:29:87.28:0,87,1283	0/0:10,0:10:30.04:0,30,402
chr10	70281762	.	CAGAGAGAGAGAGAG	C	218.61	PASS	AB=0.882;AC=7;AF=0.135;AN=52;BaseQRankSum=2.970;DP=532;FS=12.427;HRun=0;HaplotypeScore=189.0484;InbreedingCoeff=0.6056;MQ=58.25;MQ0=8;MQRankSum=-1.231;QD=3.12;ReadPosRankSum=-0.492;VQSLOD=1.5884;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:0.89:0,1,2	0/0:9,0:9:9:0,9,88	./.	./.	1/1:18,8:26:8.92:170,9,0	0/0:21,0:21:30.10:0,30,1599	0/0:15,0:17:12.04:0,12,608	0/0:28,0:28:12.93:0,13,376	0/0:19,0:18:18.06:0,18,1044	0/0:27,0:26:42.14:0,42,2312	0/0:18,0:18:18.06:0,18,812	0/0:22,0:22:33.11:0,33,1641	0/0:15,0:15:24.08:0,24,1392	0/0:21,0:21:21.07:0,21,1058	0/0:21,0:21:27.09:0,27,1368	0/0:16,0:16:24.08:0,24,1362	1/1:14,0:14:3.01:48,3,0	0/0:10,0:10:21.07:0,21,946	0/0:19,0:19:21.43:0,21,764	0/0:22,0:22:36.12:0,36,1899	0/0:15,0:15:24.08:0,24,1259	0/0:21,0:20:18.06:0,18,949	0/1:13,2:15:57.45:108,0,57	1/1:12,0:13:2.49:9,2,0	0/0:21,0:20:30.09:0,30,1325	0/0:26,0:26:52.06:0,52,2727	0/0:32,0:33:38.62:0,39,1778	0/0:8,0:7:16.30:0,16,461
chr10	70282626	.	CCA	C	362.15	PASS	AB=0.912;AC=9;AF=0.173;AN=52;BaseQRankSum=3.446;DP=641;FS=0.000;HRun=0;HaplotypeScore=96.5829;InbreedingCoeff=-0.0401;MQ=61.53;MQ0=18;MQRankSum=3.911;QD=2.07;ReadPosRankSum=0.578;VQSLOD=1.6630;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:35:8.99:0,9,74	0/0:8,0:11:3.01:0,3,38	./.	./.	0/0:9,0:17:11.36:0,11,89	0/1:20,1:23:28.54:29,0,302	0/1:25,1:26:37.82:38,0,264	0/0:23,0:25:23.87:0,24,207	0/0:27,2:29:11.77:0,12,597	0/0:12,0:12:14.82:0,15,158	0/1:14,0:15:26.45:26,0,198	0/1:23,1:25:23.71:24,0,616	0/0:7,0:7:6.02:0,6,91	0/0:24,1:25:5.75:0,6,508	0/0:24,0:24:39.10:0,39,541	0/0:19,1:21:2.72:0,3,427	0/0:18,0:23:9.01:0,9,88	0/0:10,0:15:17.88:0,18,135	0/0:13,0:13:12.03:0,12,162	0/0:12,0:12:17.93:0,18,230	0/0:52,7:59:8.52:0,9,823	0/1:16,2:18:36.95:37,0,250	0/0:16,0:20:3:0,3,27	0/0:22,0:38:20.30:0,20,174	0/1:19,4:23:39.68:40,0,240	0/1:19,1:20:25.51:26,0,169	1/1:14,8:23:27.85:282,28,0	0/0:7,0:7:16.30:0,16,220
chr10	70282828	.	G	GA	395.81	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.087;DP=603;FS=3.963;HRun=6;HaplotypeScore=79.0385;InbreedingCoeff=0.9988;MQ=80.79;MQ0=0;MQRankSum=-2.480;QD=28.27;ReadPosRankSum=0.267;VQSLOD=4.1935;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.14:0,63,643	1/1:0,14:14:39.12:491,39,0	0/0:19,0:20:49.92:0,50,493	0/0:20,0:20:47.81:0,48,474	0/0:26,0:26:78.18:0,78,795	0/0:29,0:29:75.17:0,75,765	0/0:18,0:18:42.09:0,42,428	0/0:22,0:22:51.11:0,51,520	0/0:11,0:11:30.06:0,30,306	0/0:28,0:28:69.14:0,69,698	0/0:24,0:24:66.13:0,66,666	0/0:19,0:19:54.12:0,54,551	0/0:21,0:21:57.13:0,57,581	0/0:16,0:16:45.08:0,45,451	0/0:34,0:34:96.22:0,96,979	0/0:18,0:18:51.12:0,51,520	0/0:18,0:18:41.76:0,42,409	0/0:18,0:18:48.10:0,48,490	0/0:28,0:28:84.19:0,84,856	0/0:20,0:20:54.12:0,54,551	0/0:21,0:21:51.11:0,51,520	0/0:22,0:22:57.13:0,57,581	0/0:31,0:31:87.20:0,87,887	0/0:23,0:23:63.14:0,63,642	0/0:23,0:23:63.14:0,63,642	0/0:16,0:16:42.10:0,42,429	0/0:29,0:29:72.13:0,72,720	0/0:12,0:12:30.03:0,30,295
chr10	70284201	.	G	GCA	1467.45	PASS	AB=0.833;AC=19;AF=0.413;AN=46;BaseQRankSum=-3.226;DP=512;FS=4.404;HRun=0;HaplotypeScore=85.8943;InbreedingCoeff=0.2498;MQ=59.53;MQ0=12;MQRankSum=0.375;QD=5.56;ReadPosRankSum=-2.012;VQSLOD=2.4401;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:13.56:135,14,0	0/1:8,0:9:30.61:31,0,49	./.	./.	./.	./.	0/0:20,0:22:6.48:0,6,75	0/0:15,0:18:0.47:0,0,1	0/1:10,6:17:29.21:163,0,29	0/1:22,1:24:21.54:22,0,155	0/1:12,1:16:24.01:24,0,116	0/0:13,0:15:20.70:0,21,184	0/0:6,0:6:3.01:0,3,33	0/0:15,0:15:21.02:0,21,219	0/0:17,0:17:21.05:0,21,225	0/0:12,0:13:17.88:0,18,180	1/1:26,0:26:17.72:141,18,0	./.	0/1:12,4:14:18.14:142,0,18	1/1:10,10:21:21.07:316,21,0	0/1:19,14:33:12.09:250,0,12	0/0:13,0:13:21.05:0,21,232	1/1:14,0:14:2.99:24,3,0	1/1:34,0:34:9:91,9,0	0/0:17,0:18:20.88:0,21,206	0/0:23,0:25:22.36:0,22,167	0/1:12,9:21:12.14:250,0,12	1/1:5,0:5:5.94:41,6,0
chr10	70284752	.	C	CAGCCTCCAGGGTAA	24104.43	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.341;DP=731;FS=4.450;HRun=0;HaplotypeScore=308.4410;InbreedingCoeff=0.9699;MQ=80.99;MQ0=0;MQRankSum=-17.513;QD=121.13;ReadPosRankSum=-4.577;VQSLOD=3.5015;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:23,14:37:78.24:5088,78,0	1/1:12,4:16:42.09:2314,42,0	0/0:25,0:25:53.83:0,54,2265	0/0:28,0:28:72.20:0,72,2066	1/1:28,14:42:89.99:4065,90,0	0/0:27,0:27:78.25:0,78,3106	0/0:35,0:35:99:0,105,4159	1/1:34,4:38:99:5690,105,0	0/0:20,0:20:57.20:0,57,2325	0/0:27,0:27:75.24:0,75,3015	0/0:24,0:24:72.25:0,72,2983	0/0:33,0:33:96.33:0,96,3909	0/0:33,0:33:99:0,99,3872	0/0:27,0:27:81.28:0,81,3256	0/0:39,0:39:99:0,117,4522	0/0:26,0:26:78.24:0,78,2963	1/1:9,4:13:27.08:1507,27,0	1/1:6,4:10:21:1106,21,0	0/0:23,0:23:66.20:0,66,2433	0/0:23,0:23:66.21:0,66,2500	0/0:25,0:25:75.24:0,75,2926	0/0:32,0:32:93.31:0,93,3540	1/1:18,10:28:63.04:2822,63,0	1/1:9,6:15:22.80:1513,23,0	0/0:32,0:32:87.30:0,87,3708	0/0:26,0:26:78.26:0,78,3253	0/0:26,0:25:75.26:0,75,3161	0/0:1,0:1:3.01:0,3,130
chr10	70284772	.	ACCTTT	A	8332.25	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.820;DP=709;FS=0.000;HRun=0;HaplotypeScore=168.2117;InbreedingCoeff=0.9767;MQ=83.14;MQ0=0;MQRankSum=-14.620;QD=51.43;ReadPosRankSum=-4.676;VQSLOD=3.3797;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:26:57.19:1262,57,0	1/1:0,12:12:33.11:735,33,0	0/0:29,0:29:84.21:0,84,2314	0/0:30,0:30:69.42:0,69,2081	1/1:1,35:36:90.15:1789,90,0	0/0:28,0:28:84.29:0,84,2714	0/0:32,0:32:96.33:0,96,3043	1/1:2,30:32:90.27:1850,90,0	0/0:20,0:20:60.21:0,60,1939	0/0:29,0:29:87.30:0,87,2808	0/0:22,0:22:66.23:0,66,2132	0/0:33,0:33:99:0,99,3090	0/0:40,0:40:99:0,117,3716	0/0:28,0:28:84.29:0,84,2710	0/0:36,0:36:99:0,108,3491	0/0:32,0:32:96.33:0,96,3080	1/1:2,8:10:21.07:461,21,0	1/1:1,6:7:12.04:267,12,0	0/0:20,0:20:60.21:0,60,1936	0/0:26,0:26:75.25:0,75,2323	0/0:20,0:20:60.21:0,60,1939	0/0:34,0:34:99:0,102,3235	1/1:3,21:24:57.19:1234,57,0	1/1:0,15:15:33.11:735,33,0	0/0:33,0:33:99:0,99,3127	0/0:26,0:26:75.26:0,75,2423	0/0:27,0:27:81.28:0,81,2614	0/0:2,0:2:6.02:0,6,135
chr10	70288345	.	GA	G	1373.45	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.049;DP=729;FS=23.675;HRun=1;HaplotypeScore=73.9150;InbreedingCoeff=0.9832;MQ=86.52;MQ0=0;MQRankSum=-1.869;QD=39.24;ReadPosRankSum=-4.113;VQSLOD=0.9244;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.32:0,93,1487	0/0:14,0:14:39.13:0,39,624	0/0:30,0:30:90.30:0,90,1403	0/0:21,0:21:60.20:0,60,917	0/0:25,0:25:75.26:0,75,1197	0/0:22,0:22:66.21:0,66,1031	0/0:35,0:35:99:0,105,1647	1/1:0,35:35:99:1468,105,0	0/0:24,0:24:72.23:0,72,1122	0/0:35,0:35:99:0,105,1638	0/0:27,0:27:81.28:0,81,1294	0/0:22,0:22:66.19:0,66,1007	0/0:32,0:32:96.33:0,96,1535	0/0:29,0:29:87.30:0,87,1391	0/0:29,0:29:87.28:0,87,1368	0/0:26,0:26:78.27:0,78,1246	0/0:28,0:28:84.29:0,84,1343	0/0:14,0:14:42.14:0,42,671	0/0:19,0:19:57.19:0,57,909	0/0:20,0:20:60.20:0,60,959	0/0:34,0:34:99:0,102,1631	0/0:29,0:29:87.30:0,87,1391	0/0:20,0:20:60.20:0,60,957	0/0:32,0:32:96.33:0,96,1535	0/0:31,0:31:93.32:0,93,1487	0/0:27,0:27:81.26:0,81,1251	0/0:32,0:32:96.33:0,96,1528	0/0:6,0:6:14.71:0,15,214
chr10	70289215	.	T	TAAA	850.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.277;DP=780;FS=0.910;HRun=8;HaplotypeScore=115.6691;InbreedingCoeff=0.7962;MQ=77.23;MQ0=0;MQRankSum=-2.775;QD=40.50;ReadPosRankSum=-1.011;VQSLOD=2.9380;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:90.24:0,90,1182	0/0:11,0:11:30.07:0,30,378	0/0:21,0:20:42.10:0,42,534	0/0:15,0:15:0.32:0,0,345	0/0:29,0:29:72.18:0,72,929	0/0:30,0:30:90.29:0,90,1182	0/0:22,0:22:66.20:0,66,851	0/0:34,0:34:99:0,99,1287	0/0:25,0:25:75.24:0,75,984	0/0:37,0:37:93.26:0,93,1206	0/0:31,0:31:90.23:0,90,1145	0/0:32,0:32:81.23:0,81,1050	0/0:25,0:25:60.14:0,60,757	0/0:29,0:29:81.26:0,81,1063	0/0:39,0:39:99:0,108,1402	0/0:38,0:38:99:0,105,1334	0/0:26,0:26:75.20:0,75,967	1/1:4,17:21:48.16:945,48,0	0/0:23,0:23:50.95:0,51,669	0/0:33,0:34:93.17:0,93,1171	0/0:23,0:23:57.13:0,57,719	0/0:32,0:32:90.27:0,90,1166	0/0:26,0:26:66.19:0,66,864	0/0:28,0:28:78.21:0,78,1008	0/0:32,0:32:78.18:0,78,1006	0/0:31,0:31:72.19:0,72,945	0/0:39,0:38:99:0,108,1418	0/0:10,0:10:30.10:0,30,394
chr10	70290674	.	AACAGGGCATCCAAG	A	2524.77	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.956;DP=739;FS=6.634;HRun=0;HaplotypeScore=278.9851;InbreedingCoeff=0.9843;MQ=88.56;MQ0=0;MQRankSum=-5.047;QD=74.26;ReadPosRankSum=-2.168;VQSLOD=2.3380;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,6499	0/0:13,0:13:39.13:0,39,2276	0/0:29,0:29:81.27:0,81,4379	0/0:27,0:27:75.26:0,75,4176	0/0:20,0:20:48.16:0,48,3293	0/0:26,0:26:75.24:0,75,4936	0/0:30,0:30:84.29:0,84,5582	1/1:10,24:34:72.21:2620,72,0	0/0:31,0:31:87.30:0,87,5669	0/0:20,0:20:60.20:0,60,3883	0/0:19,0:19:51.10:0,51,2828	0/0:37,0:37:99:0,108,6903	0/0:32,0:32:90.28:0,90,5665	0/0:22,0:22:66.19:0,66,3988	0/0:49,0:49:99:0,144,9021	0/0:23,0:23:63.19:0,63,4050	0/0:31,0:31:87.30:0,87,5798	0/0:17,0:17:48.15:0,48,2876	0/0:20,0:20:51.18:0,51,3044	0/0:23,0:23:66.23:0,66,4249	0/0:58,0:58:99:0,169,10405	0/0:17,0:17:51.11:0,51,2438	0/0:13,0:13:36.11:0,36,2179	0/0:34,0:34:99:0,102,6232	0/0:33,0:33:90.29:0,90,5283	0/0:23,0:23:69.24:0,69,4531	0/0:18,0:18:54.19:0,54,3695	0/0:5,0:5:15.05:0,15,1041
chr10	70292790	.	TCACACACACA	T	911.48	PASS	AB=0.810;AC=9;AF=0.167;AN=54;BaseQRankSum=6.423;DP=627;FS=6.905;HRun=0;HaplotypeScore=172.0173;InbreedingCoeff=0.6684;MQ=65.94;MQ0=24;MQRankSum=-5.280;QD=7.01;ReadPosRankSum=-0.313;VQSLOD=2.2233;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,8:37:5.93:40,6,0	0/0:13,0:15:19.12:0,19,209	./.	0/0:39,0:19:0:0,0,0	1/1:14,4:18:8.08:115,8,0	0/0:19,0:18:23.77:0,24,948	0/0:22,0:23:26.92:0,27,1032	0/0:24,0:22:6.02:0,6,210	0/0:21,0:21:33.11:0,33,1190	0/0:23,0:23:27.56:0,28,885	0/0:13,0:13:18.06:0,18,658	0/0:32,0:33:44.68:0,45,1658	1/1:15,6:23:4.11:571,4,0	0/0:18,0:18:22.63:0,23,844	0/0:30,0:31:30.57:0,31,1122	0/0:16,0:16:27.09:0,27,1127	0/0:13,0:12:0.89:0,1,2	0/0:25,0:24:39.13:0,39,1356	0/0:9,0:9:12.04:0,12,475	0/0:21,0:21:24.08:0,24,866	0/0:33,0:31:48.16:0,48,1766	0/0:18,0:18:15.05:0,15,463	1/1:11,2:16:11.70:159,12,0	0/1:26,8:33:86.39:166,0,86	0/0:24,0:25:27.09:0,27,995	0/0:19,0:19:30.57:0,31,1085	0/0:14,0:12:21.07:0,21,825	0/0:7,0:5:9.03:0,9,348
chr10	70301323	.	GCGCACACA	G	965.99	PASS	AB=0.700;AC=13;AF=0.241;AN=54;BaseQRankSum=7.224;DP=416;FS=3.189;HRun=0;HaplotypeScore=126.8090;InbreedingCoeff=0.7317;MQ=61.70;MQ0=18;MQRankSum=-4.820;QD=12.88;ReadPosRankSum=-0.662;VQSLOD=2.7447;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:38.51:0,39,613	0/0:5,0:5:8.97:0,9,118	0/0:15,0:6:2.17:0,2,56	0/0:20,0:8:0.34:0,0,40	0/0:22,0:21:26.96:0,27,565	0/0:14,0:12:36.07:0,36,1032	0/0:22,0:20:44.86:0,45,974	1/1:11,0:10:21.83:199,22,0	0/0:16,0:16:20.86:0,21,248	0/0:21,0:20:53.91:0,54,682	0/0:14,0:14:20.98:0,21,328	0/0:22,0:22:65.96:0,66,1473	0/0:11,0:10:26.63:0,27,288	0/0:19,0:19:53.96:0,54,1408	0/0:16,0:16:32.39:0,32,299	0/0:17,0:16:45.01:0,45,1220	0/0:19,0:18:43.86:0,44,913	0/1:4,0:7:37.56:121,0,38	1/1:8,0:8:17.75:178,18,0	1/1:2,9:11:2.98:22,3,0	1/1:14,0:11:5.99:50,6,0	0/0:11,0:10:25.27:0,25,772	0/0:14,0:14:17.99:0,18,251	0/0:25,0:25:41.68:0,42,589	0/0:14,0:13:20.90:0,21,317	1/1:10,2:12:29.77:386,30,0	1/1:0,8:10:8.77:180,9,0	./.
chr10	70301325	.	GCA	G	542.10	PASS	AB=0.946;AC=21;AF=0.477;AN=44;BaseQRankSum=2.553;DP=435;FS=0.771;HRun=0;HaplotypeScore=101.6912;InbreedingCoeff=0.1873;MQ=59.12;MQ0=22;MQRankSum=-2.295;QD=2.72;ReadPosRankSum=0.439;VQSLOD=2.0619;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:7.84:0,8,106	1/1:5,0:5:2.99:24,3,0	./.	./.	0/0:26,0:25:8.85:0,9,68	0/1:13,1:12:60.83:61,0,134	0/1:22,0:20:33.17:33,0,115	./.	1/1:4,1:17:14.37:89,14,0	0/1:14,7:21:7.04:141,0,7	1/1:6,8:14:8.84:77,9,0	0/0:23,0:23:27.95:0,28,348	0/0:12,0:11:3.44:0,3,20	0/1:19,0:20:11.36:11,0,328	1/1:11,5:16:3.01:33,3,0	0/1:16,0:15:13.92:14,0,246	0/0:23,0:20:19.30:0,19,158	0/1:7,0:7:7.65:8,0,13	1/1:9,0:9:2.98:21,3,0	./.	./.	0/0:12,0:12:11.14:0,11,146	0/0:15,0:15:2.88:0,3,23	0/0:24,0:24:7.53:0,8,49	1/1:5,6:11:8.96:98,9,0	0/1:13,0:12:7.49:32,0,7	1/1:10,0:10:8.75:50,9,0	./.
chr10	70301382	.	A	AAC	1482.63	PASS	AB=0.629;AC=12;AF=0.214;AN=56;BaseQRankSum=7.063;DP=578;FS=36.033;HRun=0;HaplotypeScore=116.1981;InbreedingCoeff=0.7529;MQ=56.22;MQ0=17;MQRankSum=0.108;QD=10.37;ReadPosRankSum=-2.506;VQSLOD=1.4726;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,15:26:15.05:419,15,0	1/1:1,0:6:5.94:45,6,0	0/0:36,0:18:20.87:0,21,450	0/0:37,0:15:17.12:0,17,279	1/1:12,19:32:42.11:575,42,0	0/0:17,0:17:51.10:0,51,689	0/0:16,0:14:33.06:0,33,427	0/0:37,0:33:89.72:0,90,963	0/0:19,0:18:42.08:0,42,628	0/0:24,0:24:66.21:0,66,959	0/0:25,0:24:53.85:0,54,694	0/0:21,0:21:60.19:0,60,893	1/1:4,7:9:11.22:138,11,0	0/0:22,0:22:66.16:0,66,937	0/0:17,0:17:48.13:0,48,699	0/0:18,0:18:48.09:0,48,648	0/1:10,12:21:75.56:217,0,76	0/0:10,0:8:20.84:0,21,215	0/0:17,0:14:38.76:0,39,337	0/0:21,0:16:35.90:0,36,397	0/0:5,0:3:2.97:0,3,20	0/0:13,0:13:32.96:0,33,451	1/1:5,16:21:12.25:186,12,0	0/1:8,13:20:2.29:72,0,2	0/0:21,0:21:53.98:0,54,725	0/0:25,0:22:53.55:0,54,600	0/0:28,0:25:63.78:0,64,781	0/0:5,0:5:15:0,15,166
chr10	70301676	.	A	AGT	4549.39	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-9.285;DP=714;FS=0.409;HRun=0;HaplotypeScore=106.5491;InbreedingCoeff=0.9982;MQ=77.78;MQ0=5;MQRankSum=-0.858;QD=28.43;ReadPosRankSum=0.850;VQSLOD=5.8812;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,22:34:63.22:1027,63,0	1/1:4,10:13:21.07:342,21,0	0/0:44,0:31:41.78:0,42,529	0/0:46,0:39:44.94:0,45,654	1/1:6,15:19:23.11:349,23,0	0/0:27,0:27:69.22:0,69,849	0/0:20,0:20:45.14:0,45,554	0/0:34,0:34:63.28:0,63,937	0/0:16,0:16:42.13:0,42,517	0/0:30,0:30:63.18:0,63,757	0/0:18,0:18:51.15:0,51,615	0/0:23,0:23:60.19:0,60,739	1/1:4,19:23:51.17:825,51,0	0/0:24,0:24:60.18:0,60,727	0/0:39,0:39:90.25:0,90,1073	0/0:38,0:38:99:0,99,1218	1/1:5,15:21:33.11:538,33,0	0/0:17,0:17:42.12:0,42,508	0/0:19,0:19:45.12:0,45,535	0/0:19,0:19:48.15:0,48,589	0/0:32,0:32:78.21:0,78,932	0/0:18,0:19:35.93:0,36,408	1/1:0,14:16:30.10:489,30,0	1/1:3,27:31:60.20:978,60,0	0/0:19,0:19:42.13:0,42,513	0/0:27,0:27:72.23:0,72,886	0/0:34,0:34:72.22:0,72,886	0/0:9,0:9:24.07:0,24,294
chr10	70301855	.	GAC	G	4722.59	PASS	AB=0.930;AC=16;AF=0.286;AN=56;BaseQRankSum=6.943;DP=755;FS=6.052;HRun=0;HaplotypeScore=106.2661;InbreedingCoeff=0.7476;MQ=63.27;MQ0=2;MQRankSum=-1.068;QD=20.10;ReadPosRankSum=2.257;VQSLOD=4.7917;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:17:41.62:438,42,0	1/1:1,8:9:24.07:288,24,0	0/0:23,0:13:14.08:0,14,283	0/0:31,0:24:47.63:0,48,668	1/1:8,20:28:54.16:646,54,0	0/0:27,0:27:63.20:0,63,982	0/0:25,0:25:54.17:0,54,841	0/0:36,1:37:30.21:0,30,945	0/0:19,0:19:42.07:0,42,618	0/0:32,1:33:84.28:0,84,1316	0/0:34,0:35:85.84:0,86,1312	0/0:35,1:36:57.33:0,57,1401	1/1:2,27:30:78.05:913,78,0	0/0:27,0:27:43.32:0,43,940	0/0:26,1:27:24.22:0,24,876	0/0:31,1:32:42.28:0,42,1164	1/1:7,27:35:72.05:841,72,0	0/0:13,0:13:30.06:0,30,452	0/0:15,0:15:30.10:0,30,471	0/0:37,0:38:93.31:0,93,1464	0/0:22,0:22:54.17:0,54,837	0/1:18,2:21:17.68:18,0,663	1/1:6,14:20:39.12:468,39,0	1/1:6,32:38:93.12:1093,93,0	0/0:29,2:32:0.27:0,0,966	0/1:34,2:36:17.13:17,0,1041	0/0:33,2:36:0.26:0,0,939	0/0:12,0:12:24.08:0,24,383
chr10	70301918	.	C	CA	5577.39	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.000;DP=749;FS=2.313;HRun=7;HaplotypeScore=108.2980;InbreedingCoeff=0.9995;MQ=74.99;MQ0=0;MQRankSum=-1.301;QD=27.21;ReadPosRankSum=-3.404;VQSLOD=3.0751;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:66.06:0,66,624	0/0:19,0:19:57.05:0,57,533	0/0:18,0:18:34.87:0,35,268	0/0:21,0:21:29.73:0,30,314	0/0:29,0:29:81.11:0,81,772	0/0:36,0:36:93.11:0,93,886	0/0:20,0:20:51.03:0,51,475	1/1:4,37:41:99:1239,111,0	0/0:19,0:19:54.07:0,54,516	0/0:29,0:29:75.10:0,75,716	0/0:37,0:37:87.13:0,87,838	0/0:32,0:32:88.69:0,89,843	0/0:32,0:32:93.04:0,93,857	0/0:27,0:27:78:0,78,728	0/0:24,0:24:57.06:0,57,544	0/0:29,0:29:75.08:0,75,709	0/0:32,0:32:87.11:0,87,827	1/1:1,14:15:36.11:431,36,0	1/1:1,12:13:36.08:416,36,0	1/1:5,38:44:99:1257,117,0	1/1:3,12:15:27.08:323,27,0	0/0:29,0:29:78.10:0,78,744	0/0:27,0:27:78:0,78,724	0/0:32,0:32:84.11:0,84,804	0/0:23,0:23:53.99:0,54,499	1/1:6,29:35:61.31:980,61,0	1/1:3,29:32:51.16:610,51,0	1/1:2,8:10:27.08:321,27,0
chr10	70302536	.	CTGTA	C	7166.84	PASS	AB=0.558;AC=15;AF=0.268;AN=56;BaseQRankSum=16.921;DP=750;FS=4.752;HRun=0;HaplotypeScore=142.6134;InbreedingCoeff=0.9063;MQ=83.75;MQ0=0;MQRankSum=-13.437;QD=41.43;ReadPosRankSum=-0.765;VQSLOD=5.1298;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.28:0,87,2262	0/0:7,0:7:21.07:0,21,560	0/0:23,0:23:60.20:0,60,1490	0/0:24,0:24:57.10:0,57,1321	0/0:22,0:22:66.23:0,66,1754	0/0:22,0:22:66.21:0,66,1704	0/0:25,0:25:75.26:0,75,1920	1/1:4,19:23:57.20:1040,57,0	0/0:29,0:29:87.30:0,87,2318	0/0:41,0:41:99:0,123,3248	0/0:20,0:20:60.21:0,60,1572	0/0:32,0:32:87.30:0,87,2320	0/0:44,0:44:99:0,132,3458	0/0:35,0:35:99:0,102,2643	0/0:46,0:46:99:0,135,3553	0/0:34,0:34:99:0,99,2588	0/0:20,0:20:57.20:0,57,1483	1/1:1,16:17:42.14:766,42,0	1/1:3,16:19:48.15:864,48,0	1/1:4,29:33:84.24:1497,84,0	1/1:5,25:30:51.17:916,51,0	0/0:34,0:34:99:0,102,2596	0/0:32,0:32:90.31:0,90,2383	0/0:29,0:29:87.30:0,87,2291	0/0:28,0:28:84.29:0,84,2241	0/1:5,19:24:19.87:970,0,20	1/1:3,19:22:45.13:834,45,0	1/1:0,5:5:15.05:279,15,0
chr10	70303946	.	T	TA	9111.36	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-8.640;DP=531;FS=0.000;HRun=6;HaplotypeScore=54.0106;InbreedingCoeff=0.9950;MQ=76.29;MQ0=0;MQRankSum=0.359;QD=32.08;ReadPosRankSum=0.368;VQSLOD=4.9167;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:22:51.16:642,51,0	1/1:0,7:7:21.07:264,21,0	0/0:10,0:10:21:0,21,203	0/0:12,0:12:27.02:0,27,253	1/1:3,25:28:63.16:775,63,0	0/0:21,0:21:51.11:0,51,520	0/0:25,0:25:63.10:0,63,632	1/1:2,28:30:81.24:1005,81,0	0/0:21,0:21:57.10:0,57,573	0/0:20,0:20:57.13:0,57,581	0/0:18,0:18:48.11:0,48,490	0/0:25,0:25:69.14:0,69,696	1/1:1,17:17:45.14:566,45,0	0/0:28,0:28:84.18:0,84,850	0/0:15,0:14:39.09:0,39,398	0/0:5,0:5:15.03:0,15,153	1/1:2,17:19:48.15:604,48,0	1/1:1,12:13:27.09:340,27,0	1/1:3,15:18:45.14:566,45,0	1/1:3,34:37:99:1244,102,0	1/1:1,8:9:24.08:302,24,0	0/0:26,0:26:72.14:0,72,723	1/1:0,15:15:39.12:490,39,0	1/1:1,17:18:48.15:604,48,0	0/0:21,0:21:60.13:0,60,608	1/1:0,20:20:57.17:704,57,0	1/1:0,23:23:63.20:793,63,0	1/1:1,6:7:18.04:213,18,0
chr10	70304062	.	GGA	G	1089.38	PASS	AB=0.856;AC=13;AF=0.232;AN=56;BaseQRankSum=10.526;DP=547;FS=0.531;HRun=0;HaplotypeScore=104.8399;InbreedingCoeff=0.6011;MQ=51.80;MQ0=12;MQRankSum=-2.290;QD=8.19;ReadPosRankSum=-0.497;VQSLOD=3.3053;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:27:51.15:0,51,684	0/0:13,0:13:36.11:0,36,471	0/0:10,0:3:9.03:0,9,161	0/0:8,0:6:14.96:0,15,185	0/0:38,0:38:98.87:0,99,1177	0/0:25,0:25:72.13:0,72,1278	0/0:24,0:23:48.02:0,48,891	1/1:11,4:15:12.67:245,13,0	0/0:13,0:12:36.06:0,36,543	0/0:23,0:22:63.12:0,63,1048	0/0:20,0:20:60.12:0,60,1021	0/0:20,0:20:60.17:0,60,1099	0/0:16,0:15:33.08:0,33,434	0/0:19,0:19:57.15:0,57,1039	0/0:22,0:22:66.17:0,66,1161	0/0:12,1:13:32.77:0,33,556	0/0:30,1:32:59.87:0,60,1015	1/1:17,1:18:5.72:140,6,0	1/1:12,3:11:6.14:164,6,0	0/1:20,7:23:36.57:218,0,37	1/1:1,0:1:0.89:2,1,0	0/0:13,0:12:36.02:0,36,659	0/0:28,0:26:66.09:0,66,815	0/0:25,0:25:57.08:0,57,684	0/0:22,0:22:66.23:0,66,1322	0/1:25,6:30:28.78:359,0,29	0/1:14,1:15:4.50:57,0,4	1/1:10,0:10:9.95:61,10,0
chr10	70304063	.	G	GA	4161.85	PASS	AB=0.630;AC=29;AF=0.518;AN=56;BaseQRankSum=4.017;DP=567;FS=25.402;HRun=10;HaplotypeScore=90.6877;InbreedingCoeff=0.8727;MQ=51.92;MQ0=12;MQRankSum=-3.617;QD=12.65;ReadPosRankSum=0.993;VQSLOD=1.5883;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,24:27:20.38:399,20,0	1/1:2,11:13:30.08:320,30,0	0/0:12,0:4:8.97:0,9,73	0/0:7,0:6:10.96:0,11,74	1/1:7,32:39:28.83:689,29,0	0/0:23,2:25:25.10:0,25,411	0/0:23,0:23:44.92:0,45,366	1/1:15,0:15:13.78:79,14,0	0/0:14,0:13:20.94:0,21,172	0/0:22,0:21:47.26:0,47,371	0/0:19,0:20:52.53:0,53,403	0/0:23,0:23:53.89:0,54,439	1/1:3,12:15:2.42:230,2,0	0/0:18,0:18:47.94:0,48,394	0/0:22,0:22:53.91:0,54,439	0/0:14,0:14:26.15:0,26,201	1/1:7,25:33:71.85:732,72,0	1/1:18,0:18:30.18:134,30,0	1/1:20,0:15:28.92:142,29,0	1/1:29,0:25:37.46:194,37,0	1/1:1,0:1:2.74:12,3,0	0/0:13,0:13:31.98:0,32,252	0/1:12,17:27:6.58:342,0,7	1/1:5,21:28:37.87:406,38,0	0/0:23,0:23:65.90:0,66,541	1/1:32,0:31:42.16:222,42,0	1/1:15,0:15:37.90:167,38,0	1/1:11,0:10:21.02:95,21,0
chr10	70304069	.	A	AAAG	5973.73	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=7.401;DP=603;FS=16.120;HRun=0;HaplotypeScore=102.5826;InbreedingCoeff=0.9636;MQ=52.55;MQ0=11;MQRankSum=-6.863;QD=38.05;ReadPosRankSum=-0.283;VQSLOD=4.5833;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:32:59.25:0,59,378	0/0:13,0:13:32.82:0,33,161	0/0:14,0:5:15:0,15,195	0/0:11,0:8:14.22:0,14,233	0/0:39,0:39:80.61:0,81,455	0/0:26,0:26:68.82:0,69,967	0/0:21,0:21:47.86:0,48,733	1/1:6,15:22:54.07:916,54,0	0/0:12,0:11:33.06:0,33,434	0/0:29,0:28:75.20:0,75,1012	0/0:21,0:21:60.18:0,60,869	0/0:22,0:22:66.18:0,66,942	0/0:16,0:15:27.50:0,27,165	0/0:17,0:17:51.17:0,51,796	0/0:19,0:19:54.18:0,54,861	0/0:16,0:16:42.03:0,42,521	0/0:36,0:36:51.94:0,52,297	1/1:3,18:22:33.02:690,33,0	1/1:17,6:19:44.06:676,44,0	1/1:12,14:22:56.79:975,57,0	1/1:0,1:1:3.01:63,3,0	0/0:18,0:17:51.08:0,51,653	0/0:23,0:21:44.09:0,44,264	0/0:29,0:29:41.06:0,41,231	0/0:29,0:29:87.25:0,87,1230	1/1:15,16:30:56.43:1306,56,0	1/1:2,18:20:42.14:874,42,0	1/1:3,7:11:20.90:475,21,0
chr10	70305268	.	A	AGC	9526.78	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-6.158;DP=708;FS=15.265;HRun=0;HaplotypeScore=81.1994;InbreedingCoeff=0.9973;MQ=81.63;MQ0=0;MQRankSum=-2.053;QD=52.93;ReadPosRankSum=1.142;VQSLOD=4.1750;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1808	0/0:13,0:13:39.12:0,39,612	0/0:18,0:18:48.16:0,48,769	0/0:23,0:23:63.15:0,63,961	0/0:36,0:36:99:0,108,1712	0/0:28,0:28:84.29:0,84,1371	0/0:22,0:22:60.20:0,60,973	1/1:6,22:29:72.23:1401,72,0	0/0:28,0:28:84.29:0,84,1367	0/0:25,0:25:75.26:0,75,1223	0/0:23,0:23:69.22:0,69,1099	0/0:31,0:31:93.30:0,93,1490	0/0:40,0:40:99:0,120,1928	0/0:30,0:30:90.31:0,90,1464	0/0:25,0:25:72.25:0,72,1171	0/0:30,0:30:84.27:0,84,1344	0/0:25,0:25:75.26:0,75,1220	1/1:1,23:26:60.21:1194,60,0	1/1:4,19:23:59.19:1207,59,0	1/1:0,17:17:48.16:975,48,0	1/1:0,17:18:45.15:914,45,0	0/0:26,0:26:78.25:0,78,1243	0/0:18,0:18:54.18:0,54,881	0/0:17,0:16:51.17:0,51,823	0/0:32,0:32:96.33:0,96,1562	1/1:1,30:31:44.36:1763,44,0	1/1:0,31:31:87.30:1768,87,0	1/1:0,5:5:15.05:305,15,0
chr10	70306005	.	CA	C	569.46	PASS	AB=0.925;AC=17;AF=0.405;AN=42;BaseQRankSum=2.824;DP=424;FS=1.872;HRun=16;HaplotypeScore=75.7783;InbreedingCoeff=0.0828;MQ=50.34;MQ0=12;MQRankSum=2.548;QD=2.12;ReadPosRankSum=2.049;VQSLOD=-0.7292;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,23:50:0.58:258,1,0	0/0:14,1:15:2.89:0,3,125	0/0:6,0:1:0:0,0,0	0/1:8,0:7:2.23:2,0,32	0/1:12,7:19:31.43:57,0,31	0/1:20,1:24:6.15:6,0,234	0/0:19,0:20:25.70:0,26,199	./.	0/0:20,0:20:23.86:0,24,183	0/1:22,3:24:11.42:11,0,198	0/1:12,0:15:18.92:19,0,92	0/1:25,2:27:10.39:10,0,238	1/1:12,8:20:15.26:82,15,0	0/1:10,1:11:2.70:3,0,71	0/0:22,0:24:9.92:0,10,216	0/0:24,1:28:23.72:0,24,309	1/1:11,11:22:21.83:133,22,0	0/1:3,0:2:4.90:5,0,7	./.	./.	./.	0/0:9,0:9:2.99:0,3,25	0/1:9,0:10:0.84:1,0,20	1/1:9,14:24:2.06:111,2,0	0/0:27,1:28:15.20:0,15,243	./.	./.	./.
chr10	70307922	.	G	GA	3664.32	PASS	AB=0.866;AC=14;AF=0.250;AN=56;BaseQRankSum=-9.097;DP=589;FS=14.990;HRun=10;HaplotypeScore=68.3770;InbreedingCoeff=0.7956;MQ=79.90;MQ0=0;MQRankSum=-0.845;QD=20.02;ReadPosRankSum=1.146;VQSLOD=3.2116;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,28:34:77.86:796,78,0	0/0:0,0:11:18.33:0,18,54	0/0:17,0:17:13.02:0,13,130	0/0:17,0:18:37.76:0,38,280	1/1:7,24:33:34.37:684,34,0	0/0:14,0:14:38.95:0,39,320	0/0:16,0:17:31.95:0,32,249	0/0:33,0:33:80.88:0,81,663	0/0:18,0:18:53.88:0,54,435	0/0:17,0:17:35.93:0,36,296	0/0:20,0:21:55.95:0,56,449	0/0:26,0:26:62.91:0,63,517	1/1:7,14:21:17.46:391,17,0	0/0:22,0:24:67:0,67,529	0/0:21,0:21:50.92:0,51,419	0/0:17,1:18:21.94:0,22,384	1/1:6,31:40:49.46:889,49,0	0/1:12,2:14:34.02:34,0,167	0/0:21,0:21:56.91:0,57,468	0/0:19,1:20:21.91:0,22,383	0/0:25,0:26:64.94:0,65,523	0/0:21,0:21:50.92:0,51,419	1/1:3,17:20:20.55:423,21,0	1/1:0,14:15:41.94:430,42,0	0/0:19,0:18:53.94:0,54,443	0/0:21,1:22:15.91:0,16,337	0/0:20,1:20:12.93:0,13,313	0/1:5,1:6:17.01:17,0,84
chr10	70308749	.	TC	T	256.59	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.159;DP=785;FS=6.502;HRun=2;HaplotypeScore=97.2200;InbreedingCoeff=0.9909;MQ=85.53;MQ0=0;MQRankSum=-1.081;QD=28.51;ReadPosRankSum=0.271;VQSLOD=2.8293;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,175,2566	1/1:0,9:9:27.09:351,27,0	0/0:28,0:28:68.52:0,69,1077	0/0:22,0:22:60.20:0,60,890	0/0:33,0:33:90.29:0,90,1326	0/0:26,0:26:78.26:0,78,1167	0/0:36,0:36:99:0,102,1450	0/0:36,0:36:99:0,108,1601	0/0:25,0:25:75.24:0,75,1104	0/0:22,0:22:66.21:0,66,966	0/0:23,0:23:69.23:0,69,1034	0/0:43,0:43:99:0,129,1913	0/0:28,0:28:81.27:0,81,1212	0/0:30,0:30:90.26:0,90,1320	0/0:42,0:41:99:0,123,1841	0/0:28,0:28:84.28:0,84,1257	0/0:28,0:28:81.26:0,81,1184	0/0:12,0:12:36.12:0,36,539	0/0:23,0:23:69.23:0,69,1034	0/0:26,0:26:63.13:0,63,894	0/0:35,0:35:99:0,102,1529	0/0:28,0:28:81.26:0,81,1194	0/0:20,0:20:54.18:0,54,804	0/0:30,0:30:87.29:0,87,1302	0/0:26,0:26:78.26:0,78,1165	0/0:27,0:27:81.27:0,81,1197	0/0:34,0:34:99:0,102,1501	0/0:6,0:6:18.06:0,18,270
chr10	70309081	.	AGC	A	4500.55	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=10.226;DP=616;FS=2.914;HRun=0;HaplotypeScore=160.0929;InbreedingCoeff=0.9179;MQ=90.87;MQ0=0;MQRankSum=-13.660;QD=34.89;ReadPosRankSum=0.702;VQSLOD=6.4713;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:51.13:715,51,0	0/0:10,0:10:30.10:0,30,608	0/0:30,0:30:90.13:0,90,1583	0/0:34,0:34:99:0,102,2057	1/1:0,17:17:42.06:569,42,0	0/0:17,0:17:51.16:0,51,986	0/0:23,0:23:69.22:0,69,1366	0/0:27,0:27:72.17:0,72,793	0/0:25,0:25:75.24:0,75,1455	0/0:24,0:24:72.23:0,72,1373	0/0:14,0:14:42.13:0,42,816	0/0:26,0:26:78.24:0,78,1499	1/1:1,24:25:75.25:1096,75,0	0/0:26,0:26:78.27:0,78,1569	0/0:45,0:45:99:0,135,2741	0/0:28,0:28:84.29:0,84,1707	1/1:0,21:21:57.19:839,57,0	0/1:10,0:10:1.94:2,0,140	0/0:19,0:19:48.11:0,48,522	0/0:18,0:18:51.14:0,51,591	0/0:20,0:20:39.84:0,40,374	0/0:24,0:24:72.25:0,72,1434	1/1:1,16:17:48.16:706,48,0	1/1:1,18:19:39.13:574,39,0	0/0:21,0:21:63.20:0,63,1214	0/0:26,0:26:78.18:0,78,892	0/0:28,0:28:54.16:0,54,791	0/0:2,0:2:6.02:0,6,65
chr10	70309437	.	TCA	T	265	PASS	AB=0.971;AC=22;AF=0.423;AN=52;BaseQRankSum=6.263;DP=637;FS=3.466;HRun=0;HaplotypeScore=141.0216;InbreedingCoeff=0.3834;MQ=62.14;MQ0=13;MQRankSum=-5.046;QD=0.77;ReadPosRankSum=3.776;VQSLOD=2.6427;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:64,0:64:13.54:62,14,0	1/1:7,0:8:2.10:13,2,0	./.	./.	1/1:31,0:31:9.41:44,9,0	0/0:20,2:22:12.63:0,13,290	0/1:22,0:21:2.42:2,0,246	0/0:29,0:29:17.46:0,17,102	0/1:11,1:12:14.79:15,0,205	0/1:17,0:16:12.01:12,0,187	0/1:15,0:16:11.71:12,0,198	0/0:21,0:21:30.10:0,30,430	1/1:23,0:23:19.79:95,20,0	0/0:22,0:20:39.10:0,39,525	0/1:25,0:25:8.03:8,0,377	0/0:16,0:16:24.08:0,24,359	1/1:15,0:15:5.68:28,6,0	0/0:7,0:11:8.01:0,8,37	0/0:16,0:16:15.31:0,15,118	0/0:19,0:21:11.95:0,12,114	0/1:14,0:13:0:0,0,0	0/1:11,0:11:16.17:16,0,254	1/1:25,0:25:19.89:98,20,0	1/1:36,0:36:5.68:28,6,0	0/1:20,3:23:2.83:3,0,284	0/0:23,0:23:49.77:0,50,352	0/0:24,0:22:17.78:0,18,154	0/0:14,0:14:13.54:0,14,113
chr10	70309464	.	CACACACACACACACAT	C	4927.45	PASS	AB=0.994;AC=20;AF=0.357;AN=56;BaseQRankSum=2.470;DP=635;FS=10.489;HRun=0;HaplotypeScore=232.7684;InbreedingCoeff=0.3806;MQ=50.89;MQ0=21;MQRankSum=-3.641;QD=14.12;ReadPosRankSum=-4.003;VQSLOD=1.6350;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,39:49:21:810,21,0	0/0:9,0:8:18.49:0,18,262	0/0:27,0:9:25.03:0,25,386	0/0:27,0:8:17.73:0,18,369	1/1:3,24:27:24.08:840,24,0	0/0:24,0:24:54.14:0,54,2765	0/0:17,0:16:45.13:0,45,2231	0/1:43,0:43:99:142,0,2045	0/0:15,0:15:42.07:0,42,1897	0/0:19,0:18:54.16:0,54,2616	0/0:19,0:19:48.16:0,48,2571	0/0:16,0:16:45.13:0,45,2689	1/1:5,24:29:21.07:989,21,0	0/0:26,0:23:69.20:0,69,3879	0/0:30,0:29:81.23:0,81,4112	0/0:19,0:19:54.14:0,54,2886	1/1:11,2:13:23.87:463,24,0	0/1:11,0:11:27.34:27,0,273	0/1:16,0:16:37.73:38,0,811	0/1:28,0:28:63.96:64,0,661	0/1:18,0:18:47.82:48,0,332	0/0:18,0:18:48.12:0,48,2382	1/1:3,21:24:23.22:1092,23,0	1/1:3,21:24:6.02:285,6,0	0/0:20,0:20:51.15:0,51,2931	0/1:30,0:30:1.63:2,0,2769	0/1:27,0:26:89.95:90,0,1341	0/1:8,0:8:38.04:38,0,571
chr10	70310404	.	AAAT	A	1294.65	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=9.192;DP=589;FS=8.597;HRun=0;HaplotypeScore=116.7390;InbreedingCoeff=0.7865;MQ=69.76;MQ0=0;MQRankSum=-0.791;QD=7.40;ReadPosRankSum=3.265;VQSLOD=1.8346;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,1:26:25.74:286,26,0	0/0:13,0:13:14.39:0,14,262	0/0:12,0:9:17.71:0,18,142	0/1:15,0:10:11.49:11,0,184	1/1:35,2:37:67.80:501,68,0	0/0:29,0:29:74.32:0,74,1206	0/0:22,0:22:60.04:0,60,921	0/1:24,0:24:14.25:14,0,286	0/0:20,0:20:50.95:0,51,710	0/0:30,0:30:81.55:0,82,1043	0/0:27,0:27:68.26:0,68,1191	0/0:27,0:27:78.04:0,78,1165	1/1:16,0:16:13.65:111,14,0	0/0:21,0:21:60.14:0,60,919	0/0:25,0:25:54.80:0,55,983	0/0:34,0:34:99:0,99,1652	1/1:21,0:21:28.47:158,28,0	0/0:7,0:7:14.92:0,15,143	0/0:14,0:14:34.68:0,35,252	0/0:29,0:29:60.01:0,60,480	0/0:13,0:13:10.03:0,10,107	0/0:18,0:18:51.09:0,51,857	1/1:20,0:20:37.71:220,38,0	1/1:15,1:16:28.97:184,29,0	0/0:17,0:17:48.14:0,48,830	0/0:28,0:28:72.10:0,72,555	0/0:25,0:25:40.99:0,41,319	0/0:3,0:3:7.84:0,8,36
chr10	70310405	.	AAT	A	2339.36	PASS	AB=0.982;AC=16;AF=0.286;AN=56;BaseQRankSum=8.362;DP=585;FS=10.097;HRun=0;HaplotypeScore=101.4206;InbreedingCoeff=0.6469;MQ=69.86;MQ0=0;MQRankSum=-1.829;QD=11.70;ReadPosRankSum=1.619;VQSLOD=2.8383;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,17:25:50.67:458,51,0	0/1:12,1:13:13.89:14,0,135	0/0:13,0:10:16.18:0,16,138	0/1:14,0:9:14.60:15,0,135	1/1:5,32:37:86.79:766,87,0	0/0:28,0:28:68.77:0,69,941	0/0:21,0:21:58.14:0,58,709	0/1:24,0:24:54.60:55,0,88	0/0:19,0:19:50.45:0,50,554	0/0:30,0:30:45.10:0,45,811	0/0:26,0:26:49.01:0,49,915	0/0:27,0:27:74.50:0,74,880	1/1:10,7:17:27.47:251,27,0	0/0:21,0:21:60.11:0,60,725	0/0:24,0:24:49.62:0,50,750	0/0:34,0:34:94.84:0,95,1266	1/1:6,15:21:30:291,30,0	0/0:7,0:7:13.92:0,14,78	0/0:14,0:14:15.70:0,16,106	0/0:28,0:29:38.21:0,38,212	0/1:13,0:13:6.32:25,0,6	0/0:19,0:19:53.86:0,54,698	1/1:3,17:20:39.53:378,40,0	1/1:3,13:16:30.01:282,30,0	0/0:17,0:17:51.11:0,51,649	0/0:27,0:28:40.77:0,41,244	0/0:25,0:25:29.56:0,30,136	0/0:3,0:3:1.90:0,2,5
chr10	70310406	.	A	AC	1271.32	PASS	AB=0.726;AC=13;AF=0.232;AN=56;BaseQRankSum=4.701;DP=588;FS=5.022;HRun=0;HaplotypeScore=97.0982;InbreedingCoeff=0.2874;MQ=70.61;MQ0=0;MQRankSum=-0.266;QD=6.76;ReadPosRankSum=0.038;VQSLOD=2.8144;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:25:4.60:5,0,23	0/0:12,0:13:20.54:0,21,135	0/0:14,0:11:6.52:0,7,182	0/1:14,0:9:10.10:10,0,132	0/0:37,0:37:35.52:0,36,137	0/0:26,0:26:75.18:0,75,963	0/0:20,0:20:60.12:0,60,777	0/1:16,9:25:59.14:187,0,59	0/0:18,0:18:54.10:0,54,705	0/0:31,0:31:86.29:0,86,1127	0/0:26,0:26:72.96:0,73,956	0/0:27,0:27:77.93:0,78,979	0/0:18,0:18:20.93:0,21,74	0/0:21,0:21:60.14:0,60,754	0/0:26,0:26:71.45:0,71,823	0/0:33,0:33:99:0,99,1303	0/0:19,0:19:14.49:0,14,38	1/1:3,4:7:0.20:105,0,0	0/1:4,11:15:1.68:204,0,2	0/1:11,18:29:32.02:263,0,32	1/1:5,7:12:23.85:214,24,0	0/0:19,0:19:54.16:0,54,718	0/0:19,0:19:12.56:0,13,28	0/0:16,0:16:10.50:0,10,27	0/0:17,0:17:51.01:0,51,613	0/1:7,23:30:39.69:247,0,40	0/1:8,16:27:4.80:134,0,5	1/1:3,1:4:5.03:56,5,0
chr10	70310407	.	TA	T	305.41	PASS	AB=0.940;AC=13;AF=0.232;AN=56;BaseQRankSum=11.184;DP=593;FS=0.873;HRun=13;HaplotypeScore=100.6778;InbreedingCoeff=0.6771;MQ=68.36;MQ0=0;MQRankSum=0.809;QD=1.64;ReadPosRankSum=4.213;VQSLOD=-0.5717;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:23.32:100,23,0	0/0:13,0:13:2.64:0,3,208	0/0:11,0:8:1.81:0,2,7	0/0:13,1:9:14.64:0,15,140	1/1:37,0:37:50.47:143,50,0	0/0:24,0:25:53.15:0,53,535	0/0:19,1:20:18.31:0,18,383	0/0:24,0:24:50.18:0,50,285	0/1:17,2:19:10.81:11,0,216	0/1:29,3:32:14.97:15,0,328	0/0:25,0:27:56.55:0,57,499	0/0:26,2:28:16.18:0,16,457	0/1:19,0:19:1.12:25,0,1	0/0:21,0:23:41.99:0,42,396	0/0:23,1:25:25.18:0,25,391	0/0:34,0:34:55.39:0,55,733	1/1:19,0:19:20.09:58,20,0	0/0:5,0:5:14.37:0,14,86	0/0:16,0:16:36.66:0,37,222	0/0:30,0:30:61.18:0,61,381	0/0:12,0:12:22.02:0,22,105	0/0:21,0:21:45.06:0,45,431	1/1:19,0:19:26.13:75,26,0	1/1:16,0:16:20.36:58,20,0	0/0:16,0:17:50.90:0,51,474	0/0:31,0:31:60.91:0,61,394	0/0:27,0:27:38.25:0,38,217	0/0:4,0:4:7.08:0,7,42
chr10	70310921	.	GAA	G	5215.90	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.350;DP=601;FS=8.123;HRun=10;HaplotypeScore=94.1066;InbreedingCoeff=0.9795;MQ=77.64;MQ0=0;MQRankSum=-1.007;QD=27.17;ReadPosRankSum=1.239;VQSLOD=4.4956;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:20:60.19:0,60,911	0/0:2,0:14:33.05:0,33,315	0/0:15,0:14:6.87:0,7,410	0/0:14,0:15:24:0,24,290	0/0:30,0:30:88.52:0,89,1319	0/0:25,0:27:77.72:0,78,1134	0/0:14,0:15:36.12:0,36,551	1/1:7,33:40:96.15:1026,96,0	0/0:18,0:18:51.17:0,51,808	0/0:23,0:23:60.20:0,60,952	0/0:27,0:27:76.14:0,76,1181	0/0:23,0:23:57.18:0,57,882	0/0:20,0:20:54.18:0,54,838	0/0:17,0:18:54.18:0,54,837	0/0:35,0:35:87.30:0,87,1380	0/0:18,0:18:45.14:0,45,693	0/0:17,0:18:50.12:0,50,681	1/1:2,4:6:12.02:134,12,0	1/1:5,24:29:72.17:803,72,0	1/1:5,29:34:78.16:870,78,0	1/1:0,11:11:33.09:368,33,0	0/0:16,0:17:41.62:0,42,600	0/0:14,0:15:36.09:0,36,508	0/0:17,0:18:44.62:0,45,653	0/0:23,0:23:63.19:0,63,956	1/1:7,24:31:72.13:779,72,0	1/1:3,26:29:75.19:836,75,0	1/1:0,12:12:36.10:401,36,0
chr10	70311355	.	A	ACC	15307.44	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-15.927;DP=608;FS=2.584;HRun=2;HaplotypeScore=62.3200;InbreedingCoeff=0.9944;MQ=86.39;MQ0=2;MQRankSum=-4.415;QD=47.99;ReadPosRankSum=1.402;VQSLOD=4.8107;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:63.22:1180,63,0	0/0:4,0:4:12.04:0,12,177	0/0:18,0:18:48.15:0,48,678	0/0:22,0:22:63.15:0,63,856	1/1:3,30:34:90.27:1649,90,0	0/0:25,0:25:75.21:0,75,1043	0/0:12,0:12:36.12:0,36,530	1/1:2,32:34:93.32:1732,93,0	0/0:22,0:22:63.20:0,63,908	0/0:29,0:29:84.28:0,84,1236	0/0:24,0:24:72.23:0,72,1040	0/0:27,0:27:69.22:0,69,996	1/1:3,23:27:69.24:1291,69,0	0/0:22,0:22:66.22:0,66,972	0/0:22,0:22:60.20:0,60,882	0/0:19,0:19:57.17:0,57,817	1/1:1,12:13:33.11:618,33,0	1/1:0,12:12:30.10:562,30,0	1/1:1,19:19:51.17:939,51,0	1/1:0,33:32:96.29:1761,96,0	1/1:1,10:13:30.10:562,30,0	0/0:23,0:23:69.23:0,69,1015	1/1:2,28:31:78.27:1461,78,0	1/1:0,14:14:30.10:562,30,0	0/0:20,0:20:60.18:0,60,846	1/1:0,18:18:51.16:922,51,0	1/1:3,33:37:93.32:1731,93,0	1/1:0,7:7:18.06:337,18,0
chr10	70312584	.	AAAG	A	530.35	PASS	AB=0.977;AC=10;AF=0.179;AN=56;BaseQRankSum=8.695;DP=534;FS=0.000;HRun=0;HaplotypeScore=93.4318;InbreedingCoeff=-0.0243;MQ=57.43;MQ0=6;MQRankSum=0.682;QD=3.82;ReadPosRankSum=0.319;VQSLOD=1.9458;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,126,1534	0/1:8,0:8:25.19:55,0,25	0/0:19,0:9:19.40:0,19,188	0/0:12,0:5:14.99:0,15,173	0/0:34,0:32:55.05:0,55,842	0/0:16,0:16:35.99:0,36,478	0/0:27,0:27:31.46:0,31,670	0/1:20,0:20:52.31:52,0,97	0/0:13,0:13:35.82:0,36,423	0/0:8,0:8:14.97:0,15,165	0/0:11,0:11:23.83:0,24,197	0/0:19,0:19:38.38:0,38,394	0/0:16,0:16:12.21:0,12,474	0/0:17,0:17:46.59:0,47,543	0/0:21,0:21:56.99:0,57,740	0/0:19,0:19:56.94:0,57,815	0/0:33,0:33:88.67:0,89,1075	0/1:15,0:15:56.42:66,0,56	0/1:19,2:21:64.72:107,0,65	0/1:13,0:13:11.22:74,0,11	0/1:16,1:16:17.53:90,0,18	0/0:14,0:14:25.07:0,25,219	0/0:17,0:17:2.67:0,3,276	0/0:32,0:32:83.01:0,83,982	0/0:17,0:17:40.41:0,40,555	0/1:17,0:17:53.86:80,0,54	0/1:23,1:24:57.92:130,0,58	1/1:4,0:2:5.17:19,5,0
chr10	70312587	.	GAAA	G	1894.15	PASS	AB=0.720;AC=17;AF=0.304;AN=56;BaseQRankSum=2.279;DP=529;FS=19.952;HRun=15;HaplotypeScore=88.9182;InbreedingCoeff=0.8779;MQ=57.73;MQ0=6;MQRankSum=0.534;QD=13.93;ReadPosRankSum=2.050;VQSLOD=0.6361;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,123,1630	1/1:1,8:9:17.99:202,18,0	0/0:20,0:10:23.35:0,23,236	0/0:11,0:5:14.93:0,15,134	0/0:32,0:30:68.99:0,69,944	0/0:14,0:16:38.27:0,38,433	0/0:20,0:24:54.14:0,54,902	0/1:11,7:18:12.40:151,0,12	0/0:11,0:11:26.92:0,27,339	0/0:10,0:10:20.97:0,21,177	0/0:12,0:13:36.01:0,36,424	0/0:18,0:18:32.93:0,33,436	0/0:17,0:17:37.10:0,37,506	0/0:16,0:16:47.96:0,48,665	0/0:19,0:20:47.92:0,48,614	0/0:19,0:19:45.07:0,45,756	0/0:29,0:32:78.02:0,78,1027	1/1:3,12:15:17.87:187,18,0	1/1:7,11:18:16.67:352,17,0	1/1:5,4:10:10.31:157,10,0	1/1:5,10:16:12.15:282,12,0	0/0:14,0:14:23.91:0,24,276	0/0:16,0:18:38.27:0,38,415	0/0:29,0:32:63.07:0,63,945	0/0:18,0:18:48.01:0,48,678	1/1:5,14:20:14.35:364,14,0	1/1:7,18:25:27.14:331,27,0	1/1:2,2:2:6.02:67,6,0
chr10	70312889	.	GTAA	G	36.51	PASS	AB=0.970;AC=5;AF=0.100;AN=50;BaseQRankSum=5.412;DP=320;FS=5.457;HRun=0;HaplotypeScore=71.8007;InbreedingCoeff=0.1152;MQ=72.34;MQ0=0;MQRankSum=-2.800;QD=1.22;ReadPosRankSum=-0.852;VQSLOD=1.0625;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:35:75.25:0,75,1376	1/1:0,3:3:6.02:85,6,0	./.	0/0:9,0:8:3.01:0,3,61	0/0:27,1:27:44.81:0,45,901	0/0:15,0:15:39.13:0,39,773	0/0:1,0:1:3.01:0,3,61	0/0:26,0:26:48.16:0,48,920	0/0:10,0:10:15.05:0,15,303	0/0:8,0:8:9.03:0,9,182	0/0:8,0:8:15.05:0,15,279	0/0:8,0:8:15.04:0,15,267	./.	0/0:7,0:7:12.04:0,12,218	0/0:15,0:14:27.08:0,27,487	0/1:9,1:10:24.47:24,0,285	0/0:22,0:22:42.12:0,42,785	0/0:10,0:9:14.37:0,14,168	0/1:12,0:12:27.38:27,0,384	./.	0/0:3,0:3:3.01:0,3,51	0/0:7,0:7:9.03:0,9,170	0/0:7,0:7:3.01:0,3,61	0/0:4,0:4:9.01:0,9,132	0/0:20,0:20:48.16:0,48,968	0/0:16,0:17:21.48:0,21,459	0/0:15,0:15:2.27:0,2,324	0/1:5,0:5:5.16:5,0,93
chr10	70312920	.	TAACAATAACAATAAC	T	2305.37	PASS	AB=0.944;AC=15;AF=0.268;AN=56;BaseQRankSum=11.342;DP=299;FS=1.046;HRun=0;HaplotypeScore=137.1975;InbreedingCoeff=0.7820;MQ=52.33;MQ0=4;MQRankSum=-10.275;QD=27.44;ReadPosRankSum=-2.362;VQSLOD=2.2946;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.15:0,93,4246	0/0:3,0:3:9.01:0,9,391	0/0:4,0:1:2.94:0,3,18	0/0:6,0:3:8.99:0,9,128	0/0:23,0:23:57.19:0,57,2191	0/0:16,0:16:48.12:0,48,2068	0/0:5,0:5:15.05:0,15,347	1/1:24,0:23:56.02:388,56,0	0/0:8,0:8:24.08:0,24,1300	0/0:5,0:5:15.05:0,15,490	0/0:8,0:8:24.08:0,24,956	0/0:11,0:11:30.10:0,30,1286	0/0:3,0:3:9.03:0,9,192	0/0:2,0:2:6.02:0,6,275	0/0:15,0:14:42.12:0,42,1217	0/0:9,0:9:27.07:0,27,1097	0/0:18,0:18:38.70:0,39,2571	1/1:9,1:9:24.23:266,24,0	1/1:7,2:9:20.93:357,21,0	1/1:1,1:2:5.99:88,6,0	1/1:2,1:3:5.85:78,6,0	0/0:4,0:4:9.03:0,9,369	0/0:5,0:5:15.05:0,15,419	0/0:3,0:3:9.03:0,9,522	0/0:33,0:33:96.22:0,96,4409	0/1:16,1:17:7.38:384,0,7	1/1:9,4:13:37.19:637,37,0	1/1:4,2:6:15.58:294,16,0
chr10	70312942	.	AATAATAAT	A	2983.37	PASS	AB=0.929;AC=15;AF=0.268;AN=56;BaseQRankSum=13.426;DP=360;FS=7.766;HRun=0;HaplotypeScore=110.2458;InbreedingCoeff=0.8697;MQ=64.40;MQ0=3;MQRankSum=-6.228;QD=29.25;ReadPosRankSum=-1.257;VQSLOD=2.2335;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,3686	0/0:5,0:5:15.05:0,15,475	0/0:12,0:10:30.10:0,30,798	0/0:8,0:6:18.06:0,18,500	0/0:22,0:22:66.23:0,66,2484	0/0:14,0:14:42.14:0,42,1577	0/0:7,0:7:21.07:0,21,780	1/1:32,0:31:89.25:782,89,0	0/0:11,0:11:33.11:0,33,1214	0/0:8,0:8:24.08:0,24,827	0/0:12,0:12:36.12:0,36,1340	0/0:12,0:12:33.11:0,33,1371	0/0:9,0:9:27.09:0,27,846	0/0:3,0:3:9.03:0,9,321	0/0:15,0:14:45.15:0,45,1743	0/0:9,0:8:27.09:0,27,969	0/0:24,0:24:72.20:0,72,2545	1/1:11,1:12:24.05:301,24,0	1/1:11,2:13:38.75:485,39,0	1/1:6,1:7:21.02:250,21,0	1/1:1,1:2:5.93:63,6,0	0/0:8,0:8:24.08:0,24,769	0/0:8,0:8:24.08:0,24,842	0/0:6,0:6:18.06:0,18,626	0/0:31,0:31:87.30:0,87,3608	0/1:12,1:13:91.60:435,0,92	1/1:13,4:16:39.02:597,39,0	1/1:4,2:6:17.99:266,18,0
chr10	70312948	.	AAT	A	4249.75	PASS	AB=0.536;AC=15;AF=0.268;AN=56;BaseQRankSum=13.236;DP=396;FS=11.869;HRun=0;HaplotypeScore=68.1578;InbreedingCoeff=0.8869;MQ=67.79;MQ0=1;MQRankSum=-6.302;QD=37.61;ReadPosRankSum=-0.040;VQSLOD=5.8933;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.32:0,96,1740	0/0:8,0:8:23.87:0,24,356	0/0:14,0:13:39.11:0,39,613	0/0:7,0:6:18.03:0,18,286	0/0:22,0:22:66.23:0,66,1252	0/0:14,0:14:39.13:0,39,690	0/0:9,0:9:27.09:0,27,476	1/1:1,33:33:96.32:1418,96,0	0/0:14,0:14:42.14:0,42,707	0/0:9,0:9:27.09:0,27,480	0/0:12,0:12:36.11:0,36,641	0/0:12,0:12:36.12:0,36,673	0/0:10,0:10:30.10:0,30,535	0/0:3,0:3:9.03:0,9,172	0/0:20,0:19:57.19:0,57,974	0/0:11,0:10:33.11:0,33,554	0/0:26,0:26:76.50:0,76,1303	1/1:1,12:13:24.06:344,24,0	1/1:2,13:15:45.15:650,45,0	1/1:1,7:8:21.07:312,21,0	1/1:4,0:4:9.03:129,9,0	0/0:8,0:8:24.08:0,24,443	0/0:11,0:11:33.11:0,33,554	0/0:6,0:6:18.06:0,18,325	0/0:32,0:32:96.33:0,96,1769	0/1:2,13:15:12.83:572,0,13	1/1:4,14:18:38.82:562,39,0	1/1:2,4:6:18.06:262,18,0
chr10	70312950	.	T	TA	1779.92	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.865;DP=405;FS=11.375;HRun=2;HaplotypeScore=69.5730;InbreedingCoeff=0.9438;MQ=71.05;MQ0=0;MQRankSum=-6.214;QD=15.48;ReadPosRankSum=-0.525;VQSLOD=2.1080;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.30:0,96,1186	0/0:8,0:8:24.06:0,24,280	0/0:17,0:16:39.10:0,39,462	0/0:5,0:5:15.05:0,15,182	0/0:24,0:24:72.20:0,72,866	0/0:14,0:14:39.12:0,39,483	0/0:10,0:10:27.08:0,27,334	1/1:34,0:34:75.90:635,76,0	0/0:14,0:14:42.13:0,42,520	0/0:11,0:11:33.09:0,33,388	0/0:13,0:13:36.10:0,36,435	0/0:13,0:13:36.11:0,36,446	0/0:10,0:10:30.09:0,30,372	0/0:3,0:3:9.03:0,9,111	0/0:20,0:19:54.17:0,54,668	0/0:11,0:10:33.10:0,33,409	0/0:26,0:26:75.23:0,75,929	1/1:13,0:13:19.93:115,20,0	1/1:15,0:15:41:388,41,0	1/1:8,0:8:18.44:146,18,0	1/1:2,4:6:8.76:95,9,0	0/0:9,0:9:27.07:0,27,323	0/0:11,0:11:33.10:0,33,408	0/0:6,0:6:18.06:0,18,223	0/0:32,0:32:93.29:0,93,1152	1/1:15,0:15:3.87:293,4,0	1/1:18,0:17:33.02:211,33,0	1/1:6,0:6:14.61:95,15,0
chr10	70313428	.	A	AAAT	13723.19	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=19.144;DP=610;FS=0.309;HRun=0;HaplotypeScore=124.2480;InbreedingCoeff=0.9653;MQ=71.45;MQ0=0;MQRankSum=-18.336;QD=57.66;ReadPosRankSum=-0.521;VQSLOD=6.4168;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:17:39.13:816,39,0	0/0:8,0:8:24.08:0,24,447	0/0:15,0:15:42.14:0,42,714	0/0:12,0:12:35.79:0,36,555	1/1:0,18:21:60.06:1266,60,0	0/0:23,0:23:69.22:0,69,1255	0/0:22,0:22:63.22:0,63,1175	1/1:0,19:20:60.10:1291,60,0	0/0:28,0:28:84.27:0,84,1521	0/0:38,0:38:99:0,114,2069	0/0:34,0:34:99:0,99,1814	0/0:32,0:32:96.32:0,96,1751	1/1:1,19:23:57.19:1278,57,0	0/0:27,0:27:81.28:0,81,1510	0/0:32,0:32:96.33:0,96,1783	0/0:41,0:41:99:0,123,2248	1/1:0,7:9:18.06:380,18,0	1/1:0,8:8:24.08:554,24,0	1/1:0,10:12:36.04:742,36,0	1/1:0,29:32:96.07:2045,96,0	1/1:0,6:6:18.06:383,18,0	0/0:34,0:34:99:0,102,1864	1/1:0,17:21:54.14:1071,54,0	1/1:0,12:14:30.02:557,30,0	0/0:26,0:26:78.27:0,78,1454	1/1:1,16:19:1.21:1100,1,0	1/1:0,27:28:81.28:1828,81,0	1/1:0,6:8:18.06:413,18,0
chr10	70314064	.	CA	C	6120.48	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.607;DP=687;FS=16.300;HRun=2;HaplotypeScore=89.4208;InbreedingCoeff=0.9981;MQ=92.85;MQ0=0;MQRankSum=-0.984;QD=37.32;ReadPosRankSum=2.681;VQSLOD=3.4603;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:81.26:1052,81,0	0/0:16,0:16:48.16:0,48,716	0/0:30,0:30:49.87:0,50,1060	0/0:29,0:29:83.68:0,84,1188	1/1:1,26:27:78.25:1012,78,0	0/0:30,0:30:90.30:0,90,1349	0/0:19,0:19:54.17:0,54,788	0/0:24,0:24:72.23:0,72,1044	0/0:29,0:29:87.29:0,87,1300	0/0:37,0:37:99:0,111,1664	0/0:31,0:31:93.30:0,93,1373	0/0:26,0:26:75.25:0,75,1124	1/1:1,33:34:93.30:1208,93,0	0/0:19,0:19:57.17:0,57,816	0/0:25,0:25:75.24:0,75,1103	0/0:26,0:26:78.26:0,78,1169	1/1:3,18:21:60.15:746,60,0	0/0:9,0:9:27.06:0,27,380	0/0:18,0:18:51.17:0,51,763	0/0:20,0:20:60.19:0,60,881	0/0:13,0:13:39.13:0,39,583	0/0:28,0:28:81.27:0,81,1213	1/1:1,32:33:99:1285,99,0	1/1:0,21:21:63.20:818,63,0	0/0:32,0:32:96.33:0,96,1437	0/0:26,0:26:75.25:0,75,1124	0/0:30,0:29:84.28:0,84,1241	0/0:6,0:6:18.06:0,18,270
chr10	70314152	.	C	CA	7018.35	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-4.787;DP=690;FS=1.437;HRun=3;HaplotypeScore=84.5665;InbreedingCoeff=0.9984;MQ=92.32;MQ0=0;MQRankSum=-5.704;QD=42.28;ReadPosRankSum=2.758;VQSLOD=3.7319;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:99:1529,102,0	0/0:17,0:17:48.14:0,48,608	0/0:35,0:35:99:0,99,1249	0/0:24,0:24:42.58:0,43,796	1/1:2,38:40:99:1719,120,0	0/0:33,0:33:96.31:0,96,1246	0/0:16,0:16:48.16:0,48,621	0/0:33,0:33:81.25:0,81,1038	0/0:29,0:28:81.25:0,81,1036	0/0:36,0:36:99:0,105,1363	0/0:23,0:23:69.22:0,69,894	0/0:26,0:26:78.25:0,78,1007	1/1:5,22:27:75.25:1119,75,0	0/0:24,0:24:69.22:0,69,895	0/0:18,0:18:54.12:0,54,668	0/0:19,0:19:51.17:0,51,662	1/1:5,26:31:85.16:1235,85,0	0/0:20,0:20:53.82:0,54,714	0/0:28,0:28:78.25:0,78,1007	0/0:29,0:29:81.26:0,81,1051	0/0:19,0:19:54.18:0,54,701	0/0:28,0:28:84.27:0,84,1090	1/1:2,15:17:48.16:718,48,0	1/1:3,14:17:51.10:698,51,0	0/0:24,0:24:72.23:0,72,935	0/0:20,0:20:60.19:0,60,767	0/0:17,0:17:48.16:0,48,623	0/0:6,0:6:18.06:0,18,233
chr10	70314891	.	CTCTCTT	C	1887.58	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=-0.086;DP=551;FS=12.142;HRun=0;HaplotypeScore=141.4838;InbreedingCoeff=0.7982;MQ=63.55;MQ0=8;MQRankSum=-4.624;QD=8.66;ReadPosRankSum=-2.409;VQSLOD=1.6253;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,1:15:14.97:120,15,0	0/1:10,0:10:12.19:12,0,494	0/0:31,0:17:32.16:0,32,506	0/0:28,0:15:35.52:0,36,367	1/1:24,2:26:29.75:243,30,0	0/0:38,0:38:99:0,105,2073	0/0:15,0:15:33.08:0,33,779	1/1:26,0:26:56.69:445,57,0	0/0:22,0:22:65.78:0,66,1726	0/0:35,0:35:98.74:0,99,2319	0/0:24,0:24:71.88:0,72,1550	0/0:28,0:27:72.21:0,72,1655	1/1:14,0:14:17.89:156,18,0	0/0:18,0:18:39.11:0,39,885	0/0:20,0:20:54.63:0,55,1330	0/0:25,0:25:65.78:0,66,1673	1/1:11,0:11:14.89:110,15,0	1/1:9,0:8:15.02:113,15,0	1/1:9,0:8:9.01:82,9,0	1/1:29,0:29:15.81:137,16,0	1/1:8,0:8:14.97:122,15,0	0/0:23,0:23:54.07:0,54,952	1/1:14,2:15:8.99:75,9,0	1/1:10,0:10:3:25,3,0	0/0:26,0:26:70.79:0,71,1878	0/1:19,0:18:57.69:255,0,58	1/1:11,0:11:13.62:139,14,0	1/1:5,0:5:8.99:74,9,0
chr10	70314897	.	T	TTC	862.14	PASS	AB=0.870;AC=14;AF=0.333;AN=42;BaseQRankSum=-0.683;DP=532;FS=12.888;HRun=0;HaplotypeScore=110.2773;InbreedingCoeff=0.2124;MQ=61.97;MQ0=11;MQRankSum=-1.742;QD=3.81;ReadPosRankSum=-1.019;VQSLOD=1.5607;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:2.22:7,2,0	0/0:7,0:10:13.54:0,14,118	0/1:32,0:16:0.83:1,0,24	0/0:32,0:15:5.75:0,6,62	0/1:24,0:24:0.02:0,0,0	0/0:34,0:38:55.88:0,56,501	0/0:11,0:12:17.83:0,18,183	./.	0/0:26,0:27:56.74:0,57,577	0/0:32,0:33:54.31:0,54,553	0/1:21,1:25:4.24:4,0,326	0/1:14,11:26:99:408,0,106	0/1:13,0:13:1.05:2,0,1	0/1:6,10:19:9.70:296,0,10	0/0:15,0:19:36.86:0,37,329	0/0:23,0:26:49.85:0,50,457	./.	0/1:9,0:8:0.71:6,0,1	./.	1/1:27,0:27:2.37:8,2,0	./.	0/1:15,9:25:76.28:234,0,76	./.	./.	0/0:23,0:25:57.70:0,58,550	0/0:17,0:16:3.01:0,3,34	1/1:11,0:11:2.50:9,2,0	./.
chr10	70314914	.	T	TCACACA	787.04	PASS	AB=0.961;AC=17;AF=0.304;AN=56;BaseQRankSum=7.301;DP=459;FS=12.039;HRun=0;HaplotypeScore=134.4002;InbreedingCoeff=0.5554;MQ=61.38;MQ0=12;MQRankSum=-5.485;QD=8.65;ReadPosRankSum=-1.086;VQSLOD=1.7830;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:7.64:79,8,0	0/0:8,0:8:24.08:0,24,492	0/0:43,0:16:41.97:0,42,775	0/0:37,0:19:23.68:0,24,730	1/1:18,3:21:5.11:94,5,0	0/0:31,0:31:87.26:0,87,1848	0/0:12,0:12:33.58:0,34,758	0/0:1,0:1:2.98:0,3,21	0/0:29,0:29:87.28:0,87,1981	0/0:28,0:28:81.27:0,81,1867	0/0:33,0:32:81.23:0,81,1689	0/0:25,0:24:63.21:0,63,1109	0/1:15,2:18:6.67:210,0,7	0/0:18,0:18:36.12:0,36,617	0/0:19,0:19:54.66:0,55,1197	0/0:25,0:25:72.22:0,72,1521	0/0:8,0:8:6.46:0,6,106	1/1:3,0:3:9.03:258,9,0	1/1:2,0:1:3.01:43,3,0	0/1:2,0:2:9.28:72,0,9	0/0:3,0:3:6:0,6,56	0/0:20,0:20:42.09:0,42,720	0/1:17,1:18:0.21:0,0,0	1/1:8,1:9:5.31:93,5,0	0/0:27,0:27:78.25:0,78,1743	0/1:3,0:2:2.48:2,0,69	1/1:2,0:2:5.81:90,6,0	0/1:2,0:2:1.32:7,0,1
chr10	70314932	.	ATG	A	163.16	PASS	AB=0.981;AC=11;AF=0.196;AN=56;BaseQRankSum=6.846;DP=573;FS=9.962;HRun=0;HaplotypeScore=113.5457;InbreedingCoeff=0.2190;MQ=60.23;MQ0=6;MQRankSum=-8.181;QD=1.10;ReadPosRankSum=-4.222;VQSLOD=-0.1205;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,1:24:2.25:2,0,45	0/0:7,0:7:20.80:0,21,326	0/0:40,0:19:36.27:0,36,818	0/0:29,0:17:36.92:0,37,607	0/1:28,2:30:8.14:8,0,107	0/0:32,1:33:50.69:0,51,1507	0/0:14,0:14:28.57:0,29,696	0/0:17,0:16:24.44:0,24,300	0/0:30,0:30:85.35:0,85,1736	0/0:25,0:25:71.05:0,71,1372	0/0:26,0:26:72.23:0,72,1374	0/0:22,0:22:66.22:0,66,1223	0/1:29,1:30:69.67:70,0,93	0/0:14,0:14:30.10:0,30,589	0/0:26,0:26:78.27:0,78,1469	0/0:27,0:27:65.75:0,66,1389	0/1:14,0:14:5.08:77,0,5	0/0:10,0:10:8.65:0,9,125	0/1:9,0:9:6.79:7,0,112	1/1:11,0:11:17.52:70,18,0	1/1:7,0:6:6.17:15,6,0	0/0:20,0:20:48.08:0,48,863	0/0:29,2:31:9.03:0,9,175	0/0:14,0:14:2.23:0,2,54	0/0:25,0:25:65.63:0,66,1292	0/0:15,0:15:21.45:0,21,318	0/1:19,0:19:40.70:41,0,56	0/1:4,0:4:15.24:18,0,15
chr10	70314936	.	A	AAC	3632.33	PASS	AB=0.641;AC=16;AF=0.286;AN=56;BaseQRankSum=3.247;DP=594;FS=3.366;HRun=0;HaplotypeScore=109.6119;InbreedingCoeff=0.7776;MQ=59.77;MQ0=6;MQRankSum=-10.894;QD=30.52;ReadPosRankSum=-2.590;VQSLOD=4.8169;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:24:14.88:0,15,118	0/0:8,0:8:18.06:0,18,231	0/0:41,0:20:36.11:0,36,437	0/0:28,0:17:17.77:0,18,335	0/0:22,0:31:7.03:0,7,160	0/0:34,0:34:78.20:0,78,946	0/0:15,0:15:33.07:0,33,425	1/1:1,18:19:53.66:843,54,0	0/0:31,0:31:90.29:0,90,1158	0/0:25,0:25:66.17:0,66,828	0/0:25,0:25:66.21:0,66,834	0/0:24,0:24:69.20:0,69,859	0/0:18,0:30:18.13:0,18,173	0/0:13,0:13:21.07:0,21,270	0/0:26,0:26:53.48:0,53,763	0/0:28,0:28:78.24:0,78,990	0/1:8,0:15:7.45:7,0,29	1/1:0,10:11:24.06:392,24,0	0/1:4,8:12:11.50:377,0,12	1/1:0,9:11:27.09:393,27,0	1/1:1,6:7:12.04:145,12,0	0/0:20,0:20:34.05:0,34,558	0/0:20,0:32:26.85:0,27,242	0/0:9,0:15:5.53:0,6,75	0/0:24,0:24:60.17:0,60,745	1/1:3,12:16:9.03:666,9,0	1/1:3,17:21:45.15:697,45,0	1/1:0,3:5:8.62:111,9,0
chr10	70316351	.	A	AGC	4446.28	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.705;DP=563;FS=6.165;HRun=0;HaplotypeScore=106.7666;InbreedingCoeff=0.9896;MQ=76.10;MQ0=0;MQRankSum=-15.211;QD=39.00;ReadPosRankSum=-1.333;VQSLOD=6.0098;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.18:0,54,881	1/1:1,4:5:15.05:210,15,0	0/0:15,0:15:42.07:0,42,645	0/0:14,0:13:22.24:0,22,377	0/0:36,0:36:99:0,105,1665	0/0:31,0:31:93.30:0,93,1493	0/0:21,0:21:63.16:0,63,973	1/1:4,10:15:45.13:608,45,0	0/0:23,0:23:69.24:0,69,1124	0/0:34,0:34:99:0,99,1595	0/0:28,0:28:84.29:0,84,1371	0/0:23,0:23:66.23:0,66,1073	0/0:23,0:23:66.20:0,66,1028	0/0:23,0:23:69.22:0,69,1102	0/0:20,0:20:60.20:0,60,979	0/0:25,0:25:75.25:0,75,1202	0/0:22,0:22:66.20:0,66,1029	1/1:3,4:7:17.99:225,18,0	1/1:4,9:13:36.11:494,36,0	1/1:0,22:22:66.21:872,66,0	1/1:1,6:7:17.95:219,18,0	0/0:27,0:27:81.28:0,81,1316	0/0:31,0:31:93.32:0,93,1513	0/0:20,0:19:57.18:0,57,904	0/0:15,0:15:45.14:0,45,711	1/1:1,19:20:60.20:840,60,0	1/1:2,19:21:63.06:812,63,0	1/1:0,4:4:12.04:166,12,0
chr10	70316352	.	A	AAATGG	9506.27	PASS	AB=0.692;AC=17;AF=0.304;AN=56;BaseQRankSum=16.445;DP=588;FS=8.856;HRun=0;HaplotypeScore=138.4264;InbreedingCoeff=0.9457;MQ=76.14;MQ0=0;MQRankSum=-16.319;QD=68.39;ReadPosRankSum=-2.189;VQSLOD=5.5614;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.19:0,54,1255	1/1:2,4:6:15.05:401,15,0	0/0:17,0:17:42.14:0,42,900	0/0:14,0:13:35.99:0,36,642	0/0:36,0:36:99:0,108,2422	0/0:30,0:30:90.31:0,90,2097	0/0:20,0:20:57.17:0,57,1281	1/1:9,9:20:51.06:1210,51,0	0/0:23,0:23:69.22:0,69,1552	0/0:33,0:33:99:0,99,2288	0/0:28,0:28:84.29:0,84,1957	0/0:23,0:23:69.22:0,69,1560	0/0:23,0:23:69.21:0,69,1485	0/0:22,0:22:66.23:0,66,1538	0/0:20,0:20:60.21:0,60,1398	0/0:25,0:25:75.26:0,75,1726	0/0:22,0:22:66.23:0,66,1504	0/1:5,4:9:0.98:376,0,1	1/1:8,9:17:42.10:1022,42,0	1/1:5,22:27:81.28:2062,81,0	1/1:2,6:8:24.07:537,24,0	0/0:28,0:28:81.25:0,81,1797	0/0:31,0:31:93.32:0,93,2137	0/0:21,0:20:57.20:0,57,1303	0/0:15,0:15:45.15:0,45,1039	1/1:4,19:23:66.22:1792,66,0	1/1:6,19:25:63.29:1784,63,0	1/1:0,4:4:12.04:322,12,0
chr10	70317424	.	C	CG	6783.61	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=3.554;DP=735;FS=1.047;HRun=2;HaplotypeScore=80.0225;InbreedingCoeff=0.9994;MQ=75.17;MQ0=0;MQRankSum=-3.362;QD=36.28;ReadPosRankSum=0.005;VQSLOD=5.1698;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,162,1917	0/0:12,0:12:36.11:0,36,445	0/0:14,0:14:39.09:0,39,451	0/0:27,0:27:52.04:0,52,781	0/0:14,0:14:27.08:0,27,334	0/0:23,0:23:69.22:0,69,855	0/0:27,0:27:75.15:0,75,883	1/1:3,22:25:66.20:931,66,0	0/0:37,0:37:99:0,102,1262	0/0:22,0:22:60.14:0,60,716	0/0:22,0:22:63.12:0,63,747	0/0:33,0:33:99:0,99,1227	0/0:33,0:33:99:0,99,1226	0/0:30,0:30:90.27:0,90,1100	0/0:32,0:32:90.28:0,90,1115	0/0:36,0:36:96.25:0,96,1136	0/0:43,0:43:99:0,126,1560	1/1:2,21:22:57.19:820,57,0	1/1:4,21:25:63.19:882,63,0	1/1:0,11:11:30.10:432,30,0	1/1:6,48:54:99:1976,138,0	0/0:13,0:13:33.10:0,33,409	0/0:17,0:17:48.11:0,48,577	0/0:44,0:44:99:0,129,1585	0/0:13,0:13:36.09:0,36,432	1/1:2,24:26:32:884,32,0	1/1:2,12:14:33.11:474,33,0	1/1:0,9:9:27.09:385,27,0
chr10	70317607	.	T	TAATG	6096.84	PASS	AB=1.000;AC=23;AF=0.426;AN=54;BaseQRankSum=14.996;DP=491;FS=4.848;HRun=0;HaplotypeScore=112.4055;InbreedingCoeff=0.4588;MQ=54.04;MQ0=0;MQRankSum=-9.965;QD=21.02;ReadPosRankSum=1.185;VQSLOD=4.2820;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,11:23:52.39:909,52,0	1/1:3,14:18:33.11:840,33,0	./.	0/0:2,0:1:2.68:0,3,11	1/1:6,31:38:75.31:1562,75,0	0/0:18,0:18:48.12:0,48,772	0/0:9,0:9:21.02:0,21,267	0/1:40,0:40:9.86:10,0,193	0/0:17,0:17:45.10:0,45,711	0/0:25,0:25:69.17:0,69,1208	0/0:25,0:25:75.22:0,75,1319	0/0:18,0:18:54.16:0,54,954	1/1:2,21:25:36.59:917,37,0	0/0:16,0:16:48.14:0,48,824	0/0:19,0:19:57.16:0,57,954	0/0:20,0:20:57.15:0,57,979	1/1:1,12:13:14.97:321,15,0	0/1:16,0:16:2.93:16,0,3	0/1:13,0:13:27.36:27,0,32	0/1:18,0:18:14.50:14,0,100	0/1:6,0:6:7.52:8,0,19	0/0:5,0:5:12:0,12,106	1/1:2,15:17:36.59:914,37,0	1/1:3,12:17:20.99:475,21,0	0/0:26,0:26:78.21:0,78,1318	0/1:19,0:18:27.39:27,0,35	1/1:23,0:23:1.21:43,1,0	0/1:4,0:4:13.19:13,0,14
chr10	70317614	.	T	TTAA	8097.96	PASS	AB=1.000;AC=23;AF=0.426;AN=54;BaseQRankSum=-2.155;DP=491;FS=12.264;HRun=0;HaplotypeScore=93.4223;InbreedingCoeff=0.4305;MQ=57.65;MQ0=0;MQRankSum=-6.667;QD=28.92;ReadPosRankSum=1.492;VQSLOD=4.5577;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:88.16:88,0,193	0/1:17,0:17:69.22:69,0,104	./.	0/0:3,0:3:4.81:0,5,28	0/1:37,0:37:99:166,0,427	0/0:18,0:18:45.14:0,45,701	0/0:10,0:10:21.05:0,21,286	1/1:4,36:41:99:2152,111,0	0/0:16,0:16:45.15:0,45,710	0/0:26,0:26:72.24:0,72,1137	0/0:26,0:26:69.23:0,69,1110	0/0:19,0:19:51.17:0,51,827	0/1:24,0:24:71.59:124,0,72	0/0:18,0:18:51.17:0,51,810	0/0:21,0:21:60.20:0,60,950	0/0:21,0:21:60.20:0,60,956	0/1:12,0:12:28.78:40,0,29	1/1:1,16:18:42.14:938,42,0	1/1:2,10:12:36.12:718,36,0	1/1:0,17:19:45.08:835,45,0	1/1:1,4:5:12.04:268,12,0	0/0:5,0:5:9.01:0,9,112	0/1:16,0:16:87.55:128,0,88	0/1:14,0:14:36.82:65,0,37	0/0:26,0:26:69.22:0,69,1097	1/1:1,16:17:48.15:968,48,0	1/1:0,22:23:60.21:1339,60,0	1/1:0,3:3:9.03:201,9,0
chr10	70318131	.	G	GT	4622.44	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-12.104;DP=658;FS=0.361;HRun=6;HaplotypeScore=63.9069;InbreedingCoeff=0.9983;MQ=88.51;MQ0=0;MQRankSum=-1.212;QD=30.61;ReadPosRankSum=2.160;VQSLOD=5.4881;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:48.15:604,48,0	0/0:16,0:16:45.06:0,45,443	0/0:31,0:31:71.97:0,72,729	0/0:17,0:17:26.19:0,26,285	1/1:6,27:33:87.18:1041,87,0	0/0:31,0:31:84.15:0,84,842	0/0:9,0:9:24.05:0,24,245	0/0:35,0:35:81.17:0,81,822	0/0:23,0:23:66.13:0,66,666	0/0:28,0:28:75.15:0,75,760	0/0:27,0:27:78.16:0,78,788	0/0:24,0:24:63.14:0,63,643	1/1:2,17:19:45.12:551,45,0	0/0:24,0:24:72.15:0,72,728	0/0:28,0:27:78.18:0,78,795	0/0:15,0:15:42.09:0,42,428	1/1:0,28:27:72.23:906,72,0	0/0:9,0:9:21.04:0,21,214	0/0:24,0:24:69.13:0,69,692	0/0:32,0:32:96.19:0,96,967	0/0:24,0:24:72.16:0,72,734	0/0:25,0:25:72.16:0,72,734	1/1:3,27:30:71.64:879,72,0	1/1:2,19:21:51.16:642,51,0	0/0:29,0:29:84.19:0,84,857	0/0:24,0:24:69.15:0,69,698	0/0:22,0:21:57.10:0,57,567	0/0:10,0:10:27.06:0,27,275
chr10	70318876	.	A	ATTGAAAGCAGGTG	51595.58	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-5.203;DP=712;FS=2.413;HRun=0;HaplotypeScore=231.7712;InbreedingCoeff=0.9834;MQ=76.63;MQ0=0;MQRankSum=-20.761;QD=142.14;ReadPosRankSum=-0.994;VQSLOD=4.7253;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,9:29:60.21:3372,60,0	0/0:7,0:7:21.07:0,21,839	0/0:21,0:21:51.16:0,51,1734	0/0:21,0:21:54.16:0,54,1490	1/1:16,17:35:87.30:4839,87,0	0/0:31,0:31:84.21:0,84,2794	0/0:28,0:28:75.26:0,75,2882	1/1:34,6:43:99:5780,102,0	0/0:29,0:29:87.29:0,87,3255	0/0:27,0:27:81.27:0,81,2850	0/0:25,0:25:72.25:0,72,2823	0/0:23,0:23:60.21:0,60,2257	1/1:17,17:35:96.33:5849,96,0	0/0:24,0:24:69.24:0,69,2705	0/0:33,0:33:84.29:0,84,3277	0/0:28,0:28:81.26:0,81,2838	1/1:8,5:16:36.12:1970,36,0	1/1:8,4:12:33.11:1779,33,0	1/1:11,7:20:60.19:3071,60,0	1/1:12,15:28:78.27:4362,78,0	1/1:10,1:11:8.99:257,9,0	0/0:28,0:28:75.24:0,75,2702	1/1:6,19:25:69.24:4267,69,0	1/1:13,17:31:78.27:4128,78,0	0/0:24,0:24:69.24:0,69,2635	1/1:8,20:29:81.28:5111,81,0	1/1:15,20:42:99:6219,105,0	1/1:0,3:7:9.03:592,9,0
chr10	70319299	.	G	GAAT	17405.19	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-6.863;DP=542;FS=0.676;HRun=0;HaplotypeScore=78.1740;InbreedingCoeff=0.9781;MQ=72.42;MQ0=0;MQRankSum=-7.463;QD=58.80;ReadPosRankSum=1.943;VQSLOD=6.9134;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:35:84.29:1966,84,0	1/1:0,7:7:18.06:425,18,0	0/0:20,0:18:45.15:0,45,760	0/0:22,0:21:54.16:0,54,890	1/1:0,13:13:36.12:849,36,0	0/0:20,0:20:57.19:0,57,990	0/0:34,0:33:96.31:0,96,1643	1/1:2,33:39:99:2283,108,0	0/0:11,0:11:30.10:0,30,529	0/0:19,0:19:54.18:0,54,928	0/0:20,0:20:57.19:0,57,993	0/0:21,0:21:63.18:0,63,1035	1/1:1,15:17:42.14:981,42,0	0/0:19,0:19:57.18:0,57,976	0/0:14,0:14:42.13:0,42,696	0/0:15,0:15:45.14:0,45,760	1/1:4,22:26:60.21:1414,60,0	1/1:3,12:15:42.10:914,42,0	1/1:1,13:15:42.13:894,42,0	1/1:6,12:18:51.16:1096,51,0	1/1:1,21:22:60.21:1399,60,0	0/0:15,0:15:45.15:0,45,774	1/1:0,21:21:63.22:1488,63,0	1/1:1,23:24:49.51:1200,50,0	0/0:16,0:16:45.15:0,45,794	1/1:2,18:20:4.27:1223,4,0	1/1:1,14:14:36.12:849,36,0	1/1:1,8:9:18.06:426,18,0
chr10	70319394	.	G	GA	7420.36	PASS	AB=0.981;AC=32;AF=0.571;AN=56;BaseQRankSum=-9.498;DP=619;FS=5.608;HRun=9;HaplotypeScore=66.9079;InbreedingCoeff=0.8319;MQ=62.81;MQ0=10;MQRankSum=-3.011;QD=20.16;ReadPosRankSum=-1.243;VQSLOD=5.0765;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:11,17:28:63.09:668,63,0	1/1:0,14:14:27.07:299,27,0	0/1:25,1:11:16.43:16,0,66	0/1:26,0:16:3.81:4,0,120	1/1:6,21:27:45.36:549,45,0	0/0:26,0:26:71.96:0,72,620	0/0:18,0:17:47.96:0,48,412	1/1:8,29:36:87.15:927,87,0	0/0:17,0:17:47.99:0,48,415	0/0:30,0:30:83.97:0,84,727	0/0:10,0:10:22.81:0,23,187	0/0:27,0:27:73.21:0,73,624	1/1:0,15:15:36.10:397,36,0	0/0:20,0:20:53.99:0,54,468	0/0:31,0:31:86.96:0,87,755	0/0:17,0:17:35.94:0,36,303	1/1:7,15:22:46.54:516,47,0	1/1:5,18:23:22.34:472,22,0	1/1:5,15:20:2.12:439,2,0	1/1:3,21:25:65.73:676,66,0	1/1:0,11:11:30.08:330,30,0	0/0:10,0:10:29.99:0,30,260	1/1:3,16:19:36.57:399,37,0	1/1:3,10:13:24.06:265,24,0	0/0:45,0:45:99:0,123,1065	1/1:1,22:23:63.15:679,63,0	1/1:4,23:27:5.02:499,5,0	1/1:1,11:12:27.05:286,27,0
chr10	70324096	.	A	AC	4640.71	PASS	AB=0.597;AC=16;AF=0.286;AN=56;BaseQRankSum=-14.054;DP=769;FS=2.482;HRun=8;HaplotypeScore=75.6710;InbreedingCoeff=0.8751;MQ=87.25;MQ0=0;MQRankSum=-6.585;QD=22.10;ReadPosRankSum=0.057;VQSLOD=5.1392;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,114,1018	0/1:4,10:14:0.19:250,0,0	0/0:33,0:33:58.32:0,58,681	0/0:23,0:22:35.66:0,36,310	0/0:28,1:29:37.40:0,37,589	0/0:19,0:19:48.01:0,48,436	0/0:29,1:30:74.92:0,75,666	1/1:7,27:34:73.40:807,73,0	0/0:29,0:29:75.03:0,75,686	0/0:33,0:33:81.01:0,81,739	0/0:28,0:28:68.82:0,69,612	0/0:30,0:30:72.03:0,72,659	0/0:23,0:23:54.01:0,54,494	0/0:21,0:21:57.03:0,57,521	0/0:38,0:38:99:0,102,929	0/0:37,0:37:96.03:0,96,870	0/0:32,0:32:87.02:0,87,791	1/1:2,13:14:33.10:381,33,0	0/1:8,14:22:9.80:405,0,10	1/1:8,24:32:56.76:888,57,0	1/1:7,32:39:38.73:700,39,0	0/0:36,0:36:84.01:0,84,767	0/0:24,0:24:69.03:0,69,631	0/0:24,0:24:63.02:0,63,572	0/0:25,0:25:51.01:0,51,466	1/1:5,16:21:20.68:492,21,0	1/1:0,24:24:48.14:554,48,0	1/1:5,4:9:15.04:164,15,0
chr10	70324909	.	T	TA	3220.27	PASS	AB=0.963;AC=19;AF=0.339;AN=56;BaseQRankSum=-10.462;DP=575;FS=0.000;HRun=11;HaplotypeScore=65.5526;InbreedingCoeff=0.7477;MQ=79.68;MQ0=0;MQRankSum=-0.801;QD=14.98;ReadPosRankSum=-2.512;VQSLOD=3.2883;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:22:49.80:0,50,377	0/0:4,0:11:14.09:0,14,41	0/1:15,0:14:20.53:21,0,43	0/1:14,0:16:0.79:1,0,77	0/0:27,2:29:1.86:0,2,380	0/0:24,1:27:33.37:0,33,422	0/0:12,0:13:32.87:0,33,255	1/1:8,26:34:51.84:682,52,0	0/0:16,0:16:47.82:0,48,372	0/0:36,0:36:74.60:0,75,580	0/0:17,0:17:38.79:0,39,297	0/0:15,0:16:43.86:0,44,331	0/0:17,0:17:40.91:0,41,323	0/0:17,0:17:41.78:0,42,319	0/0:26,0:26:59.73:0,60,463	0/0:21,0:21:50.80:0,51,395	0/0:20,0:20:44.79:0,45,348	1/1:0,6:6:18.04:183,18,0	1/1:6,16:22:7.62:431,8,0	1/1:4,27:31:25.67:623,26,0	1/1:5,13:18:24.05:244,24,0	0/0:22,0:23:50.78:0,51,394	0/0:24,0:24:62.73:0,63,487	0/1:14,2:16:22.04:22,0,216	0/0:25,0:25:68.71:0,69,531	1/1:6,20:26:57.05:555,57,0	1/1:5,20:25:47.80:487,48,0	1/1:1,5:6:18.02:175,18,0
chr10	70325794	.	AGT	A	795.78	PASS	AB=1.000;AC=14;AF=0.333;AN=42;BaseQRankSum=6.100;DP=163;FS=2.907;HRun=0;HaplotypeScore=34.3166;InbreedingCoeff=0.6044;MQ=59.11;MQ0=6;MQRankSum=-5.163;QD=20.40;ReadPosRankSum=-0.885;VQSLOD=2.9327;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:2,0:2:0:0,0,0	./.	0/0:22,0:5:1.13:0,1,65	0/0:36,0:10:7.33:0,7,77	./.	0/0:9,0:9:27.09:0,27,544	0/0:2,0:2:6.02:0,6,122	1/1:7,13:19:57:731,57,0	0/0:4,0:4:12.04:0,12,238	0/0:9,0:9:27.08:0,27,477	0/0:3,0:3:5.90:0,6,121	0/0:3,0:3:9:0,9,96	./.	0/1:1,0:1:0:0,0,0	0/0:7,0:7:21.07:0,21,389	0/0:6,0:6:17.82:0,18,278	0/0:7,0:7:11.59:0,12,74	1/1:7,1:8:14.13:114,14,0	1/1:1,0:1:2.97:20,3,0	./.	./.	0/0:1,0:1:3.01:0,3,61	./.	1/1:2,0:2:0.89:2,1,0	0/0:10,0:10:29.98:0,30,515	1/1:0,2:2:5.71:32,6,0	./.	1/1:1,2:3:0.47:27,0,0
chr10	70325848	.	C	CAG	1852.31	PASS	AB=1.000;AC=15;AF=0.288;AN=52;BaseQRankSum=-3.213;DP=304;FS=6.907;HRun=0;HaplotypeScore=45.5493;InbreedingCoeff=0.7379;MQ=69.37;MQ0=11;MQRankSum=2.128;QD=20.58;ReadPosRankSum=-2.511;VQSLOD=2.4552;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:6.45:0,6,48	0/0:1,0:1:2.99:0,3,24	0/0:27,0:10:19.98:0,20,192	0/1:17,0:8:15.50:16,0,74	0/0:1,0:1:2.99:0,3,24	0/0:12,0:12:27:0,27,382	0/0:12,0:12:29.24:0,29,326	1/1:2,31:33:85.04:1067,85,0	0/0:8,0:8:23.96:0,24,280	0/0:16,0:16:45.05:0,45,604	0/0:7,0:6:15.02:0,15,193	0/0:10,0:10:20.40:0,20,248	0/0:5,0:5:8.94:0,9,67	0/0:19,0:18:44.91:0,45,470	0/0:19,0:19:44.54:0,45,507	0/0:11,0:11:33.03:0,33,393	0/0:13,0:13:27.16:0,27,209	1/1:1,10:11:5.99:82,6,0	1/1:4,1:5:14.97:195,15,0	1/1:4,2:6:12.04:242,12,0	./.	0/0:7,0:7:15.03:0,15,215	./.	0/0:7,0:7:6.57:0,7,34	0/0:11,0:10:24.04:0,24,318	1/1:2,2:4:11.98:168,12,0	1/1:5,1:6:5.02:77,5,0	1/1:1,6:7:12.03:184,12,0
chr10	70326016	.	A	AACACAC	4211.40	PASS	AB=0.805;AC=28;AF=0.500;AN=56;BaseQRankSum=0.443;DP=594;FS=2.607;HRun=0;HaplotypeScore=144.6542;InbreedingCoeff=0.7589;MQ=60.26;MQ0=8;MQRankSum=-7.498;QD=14.42;ReadPosRankSum=-2.751;VQSLOD=3.9413;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:37:11.42:242,11,0	1/1:3,0:4:2.79:38,3,0	0/0:37,0:16:14.43:0,14,196	0/0:44,0:21:12.04:0,12,220	1/1:6,0:6:0.47:1,0,0	0/0:12,0:14:24.97:0,25,478	0/0:27,0:30:44.73:0,45,841	1/1:34,1:36:37.68:852,38,0	0/0:19,0:22:45.12:0,45,804	0/0:11,0:11:28.65:0,29,522	0/0:15,0:15:21.04:0,21,394	0/0:26,0:30:57.09:0,57,1121	1/1:10,0:14:18.06:426,18,0	0/0:24,0:26:57.19:0,57,1121	0/0:29,0:32:63.21:0,63,1246	0/0:20,0:24:51.17:0,51,997	1/1:20,7:36:23.05:465,23,0	1/1:7,1:10:10.58:136,11,0	1/1:15,1:17:18.03:378,18,0	0/1:7,2:8:0:0,0,0	1/1:23,1:33:3.48:39,3,0	0/0:9,0:9:24.08:0,24,478	1/1:14,0:14:3.01:94,3,0	1/1:19,0:27:6.23:105,6,0	0/0:6,0:6:15.05:0,15,297	0/1:13,5:19:17.75:541,0,18	1/1:14,7:23:23.22:709,23,0	1/1:3,1:4:6.02:185,6,0
chr10	70326274	.	G	GA	1956.36	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=6.748;DP=488;FS=4.761;HRun=8;HaplotypeScore=83.7415;InbreedingCoeff=0.8270;MQ=53.66;MQ0=16;MQRankSum=-7.890;QD=16.72;ReadPosRankSum=-0.775;VQSLOD=3.5718;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,18:26:57.16:651,57,0	0/0:6,0:6:15.01:0,15,137	0/0:10,0:8:14.98:0,15,130	0/1:8,0:5:13.35:13,0,47	1/1:2,20:22:45.05:489,45,0	0/0:19,0:18:39.47:0,39,357	0/0:21,0:22:50.06:0,50,445	0/0:33,0:32:74.97:0,75,674	0/0:13,0:12:24:0,24,220	0/0:19,0:18:41.99:0,42,375	0/0:24,0:22:54.02:0,54,494	0/0:20,0:19:45.02:0,45,412	1/1:10,7:16:0.30:249,0,0	0/0:14,0:14:26.99:0,27,247	0/0:26,0:25:63.03:0,63,576	0/0:22,0:22:53.99:0,54,490	1/1:8,6:11:21.02:227,21,0	0/0:15,0:13:23.97:0,24,219	0/0:7,0:6:15.01:0,15,137	0/0:18,0:18:48.03:0,48,438	0/0:17,0:16:30.01:0,30,274	0/0:22,0:21:48.01:0,48,439	1/1:7,9:16:33.04:354,33,0	1/1:5,5:10:14.88:152,15,0	0/0:13,0:12:33.02:0,33,302	0/0:29,0:27:69.02:0,69,631	0/0:19,0:19:35.98:0,36,329	0/0:3,0:3:9:0,9,80
chr10	70326287	.	C	CAA	6500.05	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-1.029;DP=537;FS=4.632;HRun=10;HaplotypeScore=78.0199;InbreedingCoeff=0.9301;MQ=58.93;MQ0=13;MQRankSum=-5.300;QD=22.03;ReadPosRankSum=-1.423;VQSLOD=4.0658;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,20:30:51.12:713,51,0	1/1:4,0:7:9.01:86,9,0	0/1:16,0:14:2.70:3,0,238	0/0:12,0:9:17.84:0,18,155	1/1:10,10:22:32.59:433,33,0	0/0:20,0:20:54.10:0,54,541	0/0:24,0:24:54.09:0,54,549	1/1:18,13:34:17.31:622,17,0	0/0:16,0:15:39.05:0,39,388	0/0:19,0:20:47.83:0,48,469	0/0:24,0:23:63.11:0,63,640	0/0:18,0:20:38.35:0,38,404	1/1:6,9:14:30.06:422,30,0	0/0:16,0:16:39.07:0,39,394	0/0:26,0:27:53.57:0,54,654	0/0:24,0:24:63.09:0,63,641	1/1:6,7:12:20.49:250,20,0	1/1:5,11:14:30.10:443,30,0	1/1:3,11:14:32.58:435,33,0	1/1:5,12:18:33.07:460,33,0	1/1:3,15:18:14.64:595,15,0	0/0:20,0:20:35.66:0,36,346	1/1:4,9:13:24.08:351,24,0	1/1:4,10:12:21.07:313,21,0	0/0:14,0:15:22.58:0,23,313	1/1:13,16:29:51.17:739,51,0	1/1:7,13:25:40.65:502,41,0	1/1:0,3:3:9.03:134,9,0
chr10	70326767	.	CA	C	277.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.245;DP=735;FS=0.000;HRun=3;HaplotypeScore=83.8840;InbreedingCoeff=0.9991;MQ=70.85;MQ0=1;MQRankSum=-1.374;QD=27.75;ReadPosRankSum=0.257;VQSLOD=2.6988;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1701	1/1:0,10:10:30.09:372,30,0	0/0:27,0:25:41.58:0,42,969	0/0:24,0:23:44.29:0,44,715	0/0:37,0:37:99:0,108,1521	0/0:28,0:28:81.27:0,81,1164	0/0:17,0:17:48.15:0,48,669	0/0:28,0:28:78.23:0,78,1017	0/0:29,0:29:87.27:0,87,1217	0/0:21,0:21:63.20:0,63,875	0/0:16,0:16:48.16:0,48,691	0/0:32,0:32:90.29:0,90,1276	0/0:24,0:24:72.24:0,72,1033	0/0:23,0:23:69.22:0,69,974	0/0:33,0:33:96.31:0,96,1365	0/0:36,0:36:99:0,108,1535	0/0:23,0:23:69.20:0,69,966	0/0:16,0:16:48.14:0,48,655	0/0:13,0:13:33.10:0,33,444	0/0:27,0:27:81.26:0,81,1118	0/0:36,0:36:99:0,105,1461	0/0:32,0:32:96.31:0,96,1353	0/0:26,0:26:75.25:0,75,1076	0/0:25,0:25:75.23:0,75,1053	0/0:29,0:29:84.28:0,84,1191	0/0:32,0:32:84.27:0,84,1166	0/0:36,0:36:99:0,105,1474	0/0:15,0:15:45.15:0,45,635
chr10	70327534	.	A	AAAAC	9260.90	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-14.925;DP=585;FS=0.000;HRun=0;HaplotypeScore=83.2536;InbreedingCoeff=0.9523;MQ=65.40;MQ0=0;MQRankSum=-2.782;QD=52.03;ReadPosRankSum=1.568;VQSLOD=5.4486;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:57.13:0,57,895	1/1:0,6:7:18.06:449,18,0	0/0:13,0:12:31.65:0,32,465	0/0:10,0:10:27.09:0,27,433	0/0:34,0:33:81.25:0,81,1337	0/0:17,0:17:48.12:0,48,793	0/0:14,0:14:27.09:0,27,460	1/1:8,19:27:57.03:1081,57,0	0/0:18,0:18:36.12:0,36,618	0/0:22,0:22:51.17:0,51,854	0/0:30,0:30:84.26:0,84,1387	0/0:25,0:25:51.17:0,51,850	0/0:29,0:29:69.13:0,69,1047	0/0:21,0:21:50.89:0,51,826	0/0:21,0:21:57.19:0,57,946	0/0:28,0:28:69.21:0,69,1111	0/0:24,0:24:60.21:0,60,1031	1/1:2,9:12:24.08:600,24,0	1/1:2,17:20:54.16:1189,54,0	1/1:1,30:33:90.31:2229,90,0	1/1:3,12:15:30.10:750,30,0	0/0:16,0:16:39.12:0,39,642	0/0:24,0:24:60.18:0,60,976	0/0:16,0:16:36.12:0,36,619	0/0:22,0:22:58.75:0,59,983	1/1:6,18:24:5.64:1243,6,0	1/1:5,26:31:66.23:1644,66,0	1/1:3,4:7:3.01:75,3,0
chr10	70327873	.	TAGA	T	426.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.531;DP=681;FS=4.661;HRun=0;HaplotypeScore=106.5987;InbreedingCoeff=0.9983;MQ=74.10;MQ0=0;MQRankSum=-3.190;QD=30.47;ReadPosRankSum=-0.153;VQSLOD=3.8747;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.28:0,93,1981	1/1:2,12:14:32.79:521,33,0	0/0:10,0:10:27.09:0,27,570	0/0:15,0:16:38.82:0,39,757	0/0:28,0:28:75.23:0,75,1554	0/0:29,0:29:51.18:0,51,1112	0/0:15,0:15:45.14:0,45,943	0/0:25,0:24:72.24:0,72,1522	0/0:29,0:29:81.26:0,81,1728	0/0:23,0:23:63.21:0,63,1341	0/0:33,0:33:87.30:0,87,1900	0/0:24,0:24:60.21:0,60,1310	0/0:28,0:28:78.27:0,78,1685	0/0:21,0:21:60.21:0,60,1276	0/0:30,0:30:84.27:0,84,1766	0/0:22,0:22:60.21:0,60,1311	0/0:39,0:39:96.33:0,96,2057	0/0:15,0:15:42.14:0,42,917	0/0:23,0:23:69.23:0,69,1413	0/0:39,0:39:99:0,111,2419	0/0:24,0:24:63.22:0,63,1361	0/0:23,0:23:60.19:0,60,1215	0/0:22,0:22:57.14:0,57,1159	0/0:19,0:19:57.20:0,57,1242	0/0:28,0:28:78.26:0,78,1630	0/0:30,0:30:87.29:0,87,1850	0/0:26,0:26:75.25:0,75,1599	0/0:13,0:13:33.06:0,33,589
chr10	70328008	.	CAT	C	463.91	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.413;DP=744;FS=3.946;HRun=0;HaplotypeScore=87.2138;InbreedingCoeff=0.9974;MQ=85.09;MQ0=1;MQRankSum=-1.267;QD=33.14;ReadPosRankSum=1.947;VQSLOD=5.9928;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,150,2683	1/1:0,14:13:39.13:559,39,0	0/0:29,0:29:87.25:0,87,1470	0/0:19,0:19:51.08:0,51,846	0/0:30,0:30:75.21:0,75,1339	0/0:16,0:16:45.15:0,45,824	0/0:21,0:21:63.22:0,63,1155	0/0:27,0:27:72.21:0,72,1205	0/0:32,0:32:93.32:0,93,1701	0/0:38,0:38:99:0,114,2072	0/0:20,0:20:51.17:0,51,906	0/0:37,0:37:99:0,111,2035	0/0:34,0:34:96.33:0,96,1741	0/0:35,0:35:99:0,102,1823	0/0:40,0:40:99:0,120,2170	0/0:22,0:22:66.23:0,66,1204	0/0:29,0:29:84.29:0,84,1519	0/0:10,0:10:30.10:0,30,550	0/0:18,0:18:54.14:0,54,902	0/0:21,0:21:63.20:0,63,1124	0/0:36,0:36:99:0,102,1870	0/0:19,0:19:54.19:0,54,984	0/0:21,0:21:57.18:0,57,1013	0/0:29,0:29:84.29:0,84,1539	0/0:27,0:27:75.24:0,75,1334	0/0:31,0:31:93.32:0,93,1699	0/0:30,0:30:84.23:0,84,1413	0/0:8,0:8:24.03:0,24,348
chr10	70330218	.	CT	C	1534.71	PASS	AB=0.898;AC=18;AF=0.321;AN=56;BaseQRankSum=-0.877;DP=613;FS=1.891;HRun=14;HaplotypeScore=96.7581;InbreedingCoeff=0.6420;MQ=74.07;MQ0=2;MQRankSum=1.425;QD=6.59;ReadPosRankSum=4.387;VQSLOD=3.0181;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,15:30:46.36:308,46,0	1/1:0,4:4:11.90:82,12,0	0/1:25,0:16:11.11:11,0,72	0/0:33,1:22:13.50:0,13,146	1/1:5,17:23:12.79:225,13,0	0/0:17,1:18:15.41:0,15,277	0/0:11,1:12:9.44:0,9,226	0/0:16,0:35:54.07:0,54,280	0/0:21,1:23:33.20:0,33,416	0/1:17,2:19:13.70:14,0,166	0/1:24,3:29:23.73:24,0,242	0/0:15,1:16:12.34:0,12,223	1/1:7,2:9:14.54:92,15,0	0/0:13,0:13:26.98:0,27,232	0/0:14,2:16:15.49:0,15,282	0/1:12,3:17:26.77:27,0,218	1/1:14,17:33:63.13:413,63,0	0/0:7,0:18:19.85:0,20,120	0/0:20,0:22:17.26:0,17,106	0/0:9,1:34:38.79:0,39,290	0/0:7,0:10:16.85:0,17,90	0/0:28,0:29:36.37:0,36,454	1/1:6,17:23:19.77:280,20,0	1/1:9,11:21:18.68:259,19,0	0/0:24,1:25:42.43:0,42,514	0/0:10,0:27:53.68:0,54,323	0/0:11,0:25:16.63:0,17,96	0/0:7,0:22:36.99:0,37,188
chr10	70331768	.	TA	T	5814.43	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.686;DP=512;FS=2.075;HRun=1;HaplotypeScore=46.8900;InbreedingCoeff=0.9989;MQ=75.79;MQ0=0;MQRankSum=-2.034;QD=39.02;ReadPosRankSum=2.615;VQSLOD=5.3003;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.19:0,60,915	0/0:12,0:12:36.05:0,36,530	0/0:11,0:11:27.93:0,28,376	0/0:14,0:12:30.10:0,30,452	0/0:32,0:32:96.29:0,96,1430	0/0:18,0:18:54.17:0,54,822	0/0:18,0:18:54.16:0,54,806	1/1:0,13:13:39.12:526,39,0	0/0:19,0:19:57.16:0,57,833	0/0:14,0:14:42.14:0,42,638	0/0:28,0:28:84.21:0,84,1185	0/0:19,0:19:57.16:0,57,834	0/0:24,0:24:72.24:0,72,1108	0/0:13,0:13:39.11:0,39,566	0/0:19,0:19:57.19:0,57,865	0/0:11,0:11:33.08:0,33,470	0/0:23,0:23:69.19:0,69,1021	1/1:0,13:13:30.10:419,30,0	1/1:0,17:17:51.16:689,51,0	1/1:0,24:24:69.19:943,69,0	1/1:0,16:16:48.16:671,48,0	0/0:8,0:8:24.08:0,24,375	0/0:20,0:20:60.17:0,60,866	0/0:13,0:13:39.09:0,39,568	0/0:27,0:26:81.25:0,81,1197	1/1:1,29:30:43.32:1144,43,0	1/1:0,27:27:78.26:1087,78,0	1/1:0,9:9:24.08:335,24,0
chr10	70332802	.	C	CT	504.75	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.874;DP=790;FS=0.960;HRun=1;HaplotypeScore=74.6176;InbreedingCoeff=0.9254;MQ=84.47;MQ0=0;MQRankSum=-3.073;QD=31.55;ReadPosRankSum=0.403;VQSLOD=3.3126;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,1731	1/1:3,13:16:9.17:588,9,0	0/0:30,0:30:55.38:0,55,897	0/0:20,0:20:56.85:0,57,695	0/0:34,0:34:96.21:0,96,1193	0/0:28,0:28:84.17:0,84,1039	0/0:31,0:31:90.24:0,90,1148	0/0:29,0:29:87.26:0,87,1096	0/0:38,0:38:99:0,114,1450	0/0:29,0:29:87.28:0,87,1120	0/0:28,0:28:78.68:0,79,971	0/0:23,0:23:69.16:0,69,827	0/0:26,0:26:75.19:0,75,928	0/0:30,0:30:87.27:0,87,1114	0/0:30,0:30:90.26:0,90,1127	0/0:36,0:36:99:0,105,1334	0/0:27,0:27:75.23:0,75,957	0/0:25,0:25:72.22:0,72,919	0/0:19,0:19:54.15:0,54,673	0/0:36,0:36:99:0,108,1373	0/0:34,0:34:96.19:0,96,1152	0/0:27,0:27:78.23:0,78,985	0/0:28,0:28:80.82:0,81,993	0/0:23,0:23:66.16:0,66,822	0/0:32,0:32:93.28:0,93,1181	0/0:34,0:34:99:0,99,1260	0/0:27,0:27:81.26:0,81,1050	0/0:5,0:5:15.05:0,15,195
chr10	70332862	.	C	CA	254.92	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.321;DP=730;FS=0.000;HRun=7;HaplotypeScore=74.0574;InbreedingCoeff=0.8287;MQ=85.75;MQ0=0;MQRankSum=-2.792;QD=21.24;ReadPosRankSum=1.913;VQSLOD=3.3347;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1151	1/1:2,10:12:4.12:333,4,0	0/0:28,0:28:69.08:0,69,657	0/0:24,0:24:50.93:0,51,466	0/0:24,0:24:60.09:0,60,579	0/0:36,0:36:99:0,102,984	0/0:24,0:24:63.10:0,63,608	0/0:28,0:28:72.03:0,72,672	0/0:33,0:33:96.11:0,96,913	0/0:29,0:29:81.13:0,81,782	0/0:21,0:21:63.10:0,63,608	0/0:34,0:34:99:0,99,950	0/0:25,0:25:63.07:0,63,602	0/0:25,0:25:69.07:0,69,654	0/0:34,0:34:99:0,99,956	0/0:31,0:30:75.11:0,75,724	0/0:22,0:22:44.18:0,44,426	0/0:24,0:24:60.09:0,60,579	0/0:23,0:23:52.63:0,53,538	0/0:24,0:24:66.08:0,66,630	0/0:22,0:22:60.09:0,60,579	0/0:33,0:33:81.09:0,81,776	0/0:29,0:29:81.11:0,81,776	0/0:18,0:18:41.98:0,42,384	0/0:20,0:20:57.09:0,57,551	0/0:32,0:32:75.10:0,75,724	0/0:25,0:25:72.12:0,72,695	0/0:7,0:7:21.03:0,21,203
chr10	70333058	.	GAAA	G	3466.37	PASS	AB=0.650;AC=23;AF=0.411;AN=56;BaseQRankSum=2.645;DP=580;FS=3.832;HRun=14;HaplotypeScore=100.7241;InbreedingCoeff=0.5521;MQ=66.26;MQ0=0;MQRankSum=-2.208;QD=12.51;ReadPosRankSum=2.033;VQSLOD=2.0122;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:7,2:39:38.37:38,0,124	1/1:2,0:12:20.64:142,21,0	0/0:12,0:8:12.90:0,13,139	0/1:7,0:5:10.58:11,0,19	0/0:13,0:30:26.53:0,27,128	0/0:21,0:22:45.13:0,45,782	0/0:12,0:14:36.12:0,36,664	1/1:11,24:37:73.55:843,74,0	0/0:24,0:25:66.10:0,66,1057	0/0:24,0:24:54.16:0,54,915	0/0:30,0:30:72.23:0,72,1272	0/0:18,0:19:45.15:0,45,808	0/1:2,2:25:38.57:39,0,56	0/0:19,0:22:57.10:0,57,858	0/0:25,0:26:63.17:0,63,1073	0/0:14,0:19:46.33:0,46,716	0/1:6,1:17:17.84:18,0,31	1/1:3,13:17:8.59:325,9,0	1/1:9,11:20:32.97:363,33,0	1/1:4,20:24:38.88:455,39,0	1/1:4,6:10:13.46:173,13,0	0/0:15,0:15:42.12:0,42,681	0/1:6,2:24:43.66:44,0,54	0/0:3,0:23:2.87:0,3,26	0/0:19,0:22:51.09:0,51,791	1/1:3,14:19:0.58:427,1,0	1/1:2,21:23:42.08:491,42,0	1/1:3,0:3:9.02:99,9,0
chr10	70333509	.	TTTCACTTCTGTTGCCA	T	10364.03	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.605;DP=660;FS=13.386;HRun=0;HaplotypeScore=291.8623;InbreedingCoeff=0.9928;MQ=83.05;MQ0=0;MQRankSum=-13.763;QD=87.09;ReadPosRankSum=3.539;VQSLOD=3.4610;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,22:30:45.15:2036,45,0	0/0:10,0:10:27.09:0,27,1692	0/0:21,0:21:63.21:0,63,3580	0/0:20,0:20:54.18:0,54,3369	1/1:2,18:20:42.14:2011,42,0	0/0:25,0:25:66.23:0,66,5152	0/0:32,0:32:96.32:0,96,6784	0/0:30,0:30:90.31:0,90,5898	0/0:21,0:21:63.22:0,63,4454	0/0:37,0:37:99:0,111,8073	0/0:23,0:23:66.22:0,66,4294	0/0:31,0:31:93.32:0,93,7183	1/1:2,27:29:75.26:3592,75,0	0/0:26,0:26:78.27:0,78,5852	0/0:35,0:35:99:0,105,6969	0/0:29,0:29:87.30:0,87,6408	1/1:2,9:11:15.05:718,15,0	0/0:11,0:11:33.11:0,33,2310	0/0:21,0:21:60.19:0,60,3329	0/0:17,0:17:51.18:0,51,3227	0/0:41,0:41:99:0,123,6751	0/0:27,0:27:81.28:0,81,5891	1/1:2,9:11:24.08:1145,24,0	1/1:6,12:18:18.06:862,18,0	0/0:28,0:28:84.29:0,84,6093	0/0:21,0:21:63.22:0,63,4095	0/0:28,0:28:84.28:0,84,5103	0/0:7,0:7:18.06:0,18,1238
chr10	70334187	.	A	ATTGG	4177.05	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=6.511;DP=803;FS=2.700;HRun=0;HaplotypeScore=154.5747;InbreedingCoeff=0.8895;MQ=48.19;MQ0=50;MQRankSum=-4.209;QD=19.07;ReadPosRankSum=-3.189;VQSLOD=3.1411;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:34,5:31:34.51:707,35,0	0/0:7,0:7:18.02:0,18,262	0/0:24,0:11:5.91:0,6,244	0/1:17,0:9:6.74:7,0,97	1/1:20,2:20:15.04:278,15,0	0/0:34,0:34:66.09:0,66,944	0/0:20,0:16:22.60:0,23,372	0/0:32,0:29:53.03:0,53,640	0/0:32,0:30:84.09:0,84,1145	0/0:24,0:22:39.12:0,39,582	0/0:25,0:24:48.12:0,48,735	0/0:33,0:29:66.13:0,66,1001	1/1:25,6:28:51.01:927,51,0	0/0:29,0:27:66.14:0,66,1051	0/0:44,0:41:93.19:0,93,1434	0/0:41,0:36:87.26:0,87,1344	1/1:38,1:33:44.93:879,45,0	0/0:28,0:26:44.34:0,44,668	0/0:29,0:20:38.93:0,39,440	0/0:20,0:18:45.14:0,45,711	0/0:52,0:47:96.31:0,96,1549	0/0:18,0:18:42.07:0,42,633	1/1:23,1:22:38.99:690,39,0	1/1:46,0:44:26.05:690,26,0	0/0:17,0:14:21.07:0,21,345	0/0:39,0:37:77.63:0,78,1032	0/0:23,0:22:44.78:0,45,686	0/0:12,0:12:18.53:0,19,398
chr10	70334258	.	A	AGTTG	6574.73	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-6.892;DP=837;FS=0.418;HRun=0;HaplotypeScore=141.0505;InbreedingCoeff=0.9956;MQ=55.17;MQ0=19;MQRankSum=0.236;QD=28.59;ReadPosRankSum=5.677;VQSLOD=4.6426;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,31:44:36.12:877,36,0	1/1:4,7:11:21.03:449,21,0	0/0:42,0:18:41.62:0,42,554	0/0:36,0:23:14.32:0,14,295	1/1:4,19:23:54.13:1142,54,0	0/0:33,0:33:69.20:0,69,1084	0/0:31,0:31:57.13:0,57,884	0/0:25,0:21:30.09:0,30,469	0/0:26,0:26:45.15:0,45,739	0/0:25,0:24:57.01:0,57,858	0/0:25,0:25:63.22:0,63,1032	0/0:33,0:32:60.20:0,60,979	1/1:8,16:24:39.13:941,39,0	0/0:29,0:29:60.17:0,60,935	0/0:35,0:34:75.23:0,75,1178	0/0:38,0:37:54.18:0,54,884	1/1:9,29:39:36.12:880,36,0	0/0:30,0:30:60.11:0,60,888	0/0:25,0:20:45:0,45,616	0/0:20,0:20:45.15:0,45,734	0/0:43,0:41:72.25:0,72,1177	0/0:21,0:21:48.16:0,48,784	1/1:8,22:30:35.64:821,36,0	1/1:16,42:57:60:1464,60,0	0/0:25,0:25:54.18:0,54,886	0/0:26,0:26:54.18:0,54,885	0/0:26,0:26:60.17:0,60,934	0/0:13,0:13:33.11:0,33,527
chr10	70334856	.	T	TG	5860.06	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.062;DP=637;FS=0.697;HRun=6;HaplotypeScore=75.1056;InbreedingCoeff=0.9825;MQ=87.90;MQ0=0;MQRankSum=-0.972;QD=32.38;ReadPosRankSum=1.328;VQSLOD=5.1088;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:39.56:0,40,398	1/1:1,9:10:24.08:302,24,0	0/0:26,0:26:45.03:0,45,432	0/0:23,0:22:53.47:0,53,485	0/0:40,0:40:99:0,114,1149	0/0:34,0:34:93.19:0,93,940	0/0:18,0:18:51.11:0,51,520	1/1:4,21:25:63.18:776,63,0	0/0:17,0:17:48.07:0,48,471	0/0:22,0:22:60.12:0,60,607	0/0:21,0:21:60.11:0,60,599	0/0:26,0:26:72.15:0,72,728	0/0:23,0:23:66.15:0,66,673	0/0:19,0:19:57.13:0,57,581	0/0:22,0:21:60.14:0,60,612	0/0:27,0:27:66.14:0,66,673	0/0:18,0:18:54.09:0,54,542	1/1:1,18:19:51.16:642,51,0	1/1:2,7:9:21.07:264,21,0	1/1:1,35:36:96.31:1204,96,0	1/1:1,15:16:39.12:490,39,0	0/0:27,0:26:72.14:0,72,722	0/0:36,0:36:96.19:0,96,966	0/0:24,0:24:63.11:0,63,629	0/0:18,0:18:54.12:0,54,551	1/1:3,22:25:38.60:786,39,0	1/1:2,37:39:99:1321,105,0	1/1:0,2:2:6.02:75,6,0
chr10	70335951	.	T	TTGTTCC	13260.36	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-7.144;DP=352;FS=72.616;HRun=0;HaplotypeScore=74.8950;InbreedingCoeff=0.9278;MQ=66.67;MQ0=0;MQRankSum=-13.638;QD=89.60;ReadPosRankSum=-3.348;VQSLOD=1.8679;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:27.09:0,27,632	1/1:5,10:15:45.15:1500,45,0	0/0:18,0:18:48.12:0,48,1014	0/0:7,0:7:21.07:0,21,456	0/0:15,0:15:42.13:0,42,950	0/0:17,0:17:48.15:0,48,1095	0/0:10,0:10:30.10:0,30,673	1/1:5,20:33:93.29:3018,93,0	0/0:9,0:9:27.09:0,27,621	0/0:14,0:14:39.13:0,39,892	0/0:13,0:13:36.12:0,36,863	0/0:14,0:14:39.13:0,39,937	0/0:12,0:12:36.12:0,36,839	0/0:6,0:6:18.06:0,18,406	0/0:12,0:12:36.12:0,36,853	0/0:11,0:11:30.10:0,30,719	0/0:14,0:14:42.14:0,42,999	1/1:0,1:1:3.01:108,3,0	1/1:2,10:12:27.09:971,27,0	1/1:8,19:27:75.19:2575,75,0	1/1:1,4:6:8.99:216,9,0	0/0:6,0:6:18.06:0,18,433	0/0:6,0:6:18.06:0,18,433	0/0:3,0:3:3.01:0,3,72	0/0:7,0:7:21.07:0,21,505	1/1:6,16:22:63.15:2013,63,0	1/1:6,19:26:75.20:2433,75,0	1/1:4,2:6:15.03:427,15,0
chr10	70336014	.	GATATATATATATAT	G	6131.10	PASS	AC=16;AF=0.348;AN=46;BaseQRankSum=7.913;DP=228;FS=0.745;HRun=0;HaplotypeScore=130.7755;InbreedingCoeff=0.7030;MQ=56.23;MQ0=3;MQRankSum=-8.457;QD=51.52;ReadPosRankSum=3.642;VQSLOD=4.6773;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:6.02:0,6,129	1/1:2,4:8:6.02:229,6,0	./.	0/0:9,0:5:3.90:0,4,66	./.	0/0:10,0:10:27.08:0,27,1229	0/0:5,0:5:6.01:0,6,231	1/1:18,0:21:18.44:276,18,0	0/0:4,0:4:9.03:0,9,473	0/0:8,0:8:9.02:0,9,284	0/0:2,0:2:3.01:0,3,172	0/0:7,0:7:12.04:0,12,710	0/0:1,0:1:3:0,3,25	0/0:5,0:5:15.04:0,15,540	0/0:5,0:5:6.02:0,6,383	0/0:6,0:6:9.03:0,9,561	0/0:10,0:10:6.02:0,6,256	1/1:2,1:5:9.03:241,9,0	./.	1/1:3,10:19:30.10:1206,30,0	1/1:4,1:6:3.01:121,3,0	./.	0/0:4,0:4:6.02:0,6,150	./.	0/0:4,0:4:6.02:0,6,375	1/1:3,7:16:42.06:1188,42,0	1/1:9,16:30:59.66:2210,60,0	1/1:2,4:8:21.02:661,21,0
chr10	70336038	.	TAGAGAGAG	T	2210.79	PASS	AB=1.000;AC=16;AF=0.320;AN=50;BaseQRankSum=7.957;DP=238;FS=20.877;HRun=0;HaplotypeScore=120.3016;InbreedingCoeff=0.5136;MQ=48.98;MQ0=15;MQRankSum=-5.491;QD=16.26;ReadPosRankSum=5.325;VQSLOD=1.1499;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:1.55:0,2,4	0/0:10,0:8:4.04:0,4,17	1/1:12,0:2:1.25:3,1,0	0/1:30,0:5:15.53:16,0,40	0/0:4,0:3:9.03:0,9,300	0/0:7,0:7:18.06:0,18,486	0/0:3,0:3:9.03:0,9,354	0/0:20,0:16:5.66:0,6,13	0/0:3,0:3:6.02:0,6,225	0/0:3,0:3:9.02:0,9,149	0/0:7,0:7:12.04:0,12,334	0/0:7,0:7:18.06:0,18,410	./.	0/0:2,0:2:3.01:0,3,125	0/0:6,0:6:13.86:0,14,287	0/0:4,0:4:12.04:0,12,337	./.	0/1:5,0:5:38.62:48,0,39	0/0:7,0:3:2.22:0,2,7	1/1:23,0:23:30.10:567,30,0	1/1:6,0:6:2.36:54,2,0	0/0:4,0:4:9.03:0,9,248	1/1:0,0:2:6.02:82,6,0	./.	0/0:3,0:3:3.01:0,3,34	1/1:20,0:20:15.86:388,16,0	1/1:31,0:31:26.70:946,27,0	1/1:7,0:7:15.05:267,15,0
chr10	70336559	.	CT	C	2954.27	PASS	AB=0.929;AC=13;AF=0.232;AN=56;BaseQRankSum=12.008;DP=590;FS=3.967;HRun=9;HaplotypeScore=58.5970;InbreedingCoeff=0.9165;MQ=71.18;MQ0=0;MQRankSum=0.638;QD=19.44;ReadPosRankSum=1.602;VQSLOD=4.1609;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:33:68.25:694,68,0	0/0:14,0:14:36.11:0,36,414	0/0:17,0:16:13.97:0,14,368	0/1:12,1:13:5.41:5,0,233	1/1:4,27:31:72.03:659,72,0	0/0:18,0:18:51.15:0,51,588	0/0:21,0:21:57.17:0,57,657	0/0:24,0:25:53.99:0,54,602	0/0:24,0:25:57.11:0,57,633	0/0:19,0:19:48.14:0,48,553	0/0:38,0:38:90.25:0,90,1020	0/0:18,1:19:23.68:0,24,527	1/1:1,22:23:66.04:604,66,0	0/0:15,0:15:42.12:0,42,484	0/0:27,0:27:72.20:0,72,821	0/0:15,0:15:33.10:0,33,380	1/1:4,19:23:51.02:467,51,0	0/0:11,0:11:29.98:0,30,328	0/0:22,0:22:51.14:0,51,577	0/0:27,0:27:81.07:0,81,915	0/0:9,0:9:24.04:0,24,257	0/0:17,0:17:39.11:0,39,442	1/1:3,14:17:42.02:384,42,0	1/1:0,12:12:36.02:330,36,0	0/0:21,0:21:57.15:0,57,644	0/0:34,1:35:62.80:0,63,977	0/0:26,0:26:72.20:0,72,821	0/0:16,0:16:36.11:0,36,415
chr10	70336840	.	GTGTGTGTGTT	G	3497.59	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=5.424;DP=621;FS=2.020;HRun=0;HaplotypeScore=207.5764;InbreedingCoeff=0.8507;MQ=66.80;MQ0=8;MQRankSum=-4.193;QD=23.96;ReadPosRankSum=3.401;VQSLOD=2.4686;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,8:31:41.05:798,41,0	0/1:12,0:12:99:111,0,144	0/0:26,0:17:32.20:0,32,441	0/0:34,0:24:27.41:0,27,406	1/1:16,6:22:45.06:764,45,0	0/0:43,0:42:99:0,114,3490	0/0:24,0:24:47.79:0,48,1414	0/0:43,0:43:99:0,101,1213	0/0:15,0:15:24.06:0,24,775	0/0:15,0:15:42.14:0,42,1304	0/0:26,0:26:66.16:0,66,1962	0/0:22,0:22:57.11:0,57,1759	1/1:15,4:19:38.64:677,39,0	0/0:27,0:27:63.78:0,64,2399	0/0:38,0:37:96.25:0,96,3764	0/0:25,0:25:66.21:0,66,2564	1/1:16,4:18:35.48:495,35,0	0/1:9,0:9:0.09:0,0,179	0/0:21,0:20:33.74:0,34,367	0/0:15,0:15:23.58:0,24,260	0/0:24,0:24:53.08:0,53,617	0/0:23,0:22:60.14:0,60,1784	1/1:12,0:11:22.69:290,23,0	1/1:20,1:21:27.04:363,27,0	0/0:19,0:19:47.99:0,48,1196	0/0:13,0:13:26.64:0,27,333	0/0:14,0:14:37.55:0,38,405	0/0:8,0:8:24.01:0,24,316
chr10	70336848	.	GTT	G	1510.90	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=7.539;DP=627;FS=11.414;HRun=3;HaplotypeScore=128.2792;InbreedingCoeff=0.6893;MQ=59.49;MQ0=11;MQRankSum=-4.174;QD=8.73;ReadPosRankSum=-0.821;VQSLOD=-0.6104;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:46.31:369,46,0	0/0:14,0:14:29.21:0,29,194	0/0:23,0:14:32.09:0,32,369	0/0:29,0:19:4.91:0,5,286	1/1:21,2:22:44.64:328,45,0	0/0:41,0:40:87.98:0,88,1500	0/0:22,0:22:56.69:0,57,802	0/0:46,0:45:59.78:0,60,940	0/0:15,0:15:24.04:0,24,249	0/0:17,0:17:28.44:0,28,491	0/0:28,0:28:10.34:0,10,890	0/0:21,0:21:15.31:0,15,688	1/1:18,1:19:35.85:269,36,0	0/0:28,0:27:27.92:0,28,976	0/0:35,0:34:62.44:0,62,1440	0/0:24,0:24:38.48:0,38,936	1/1:20,0:18:33.19:235,33,0	0/1:9,0:9:22.22:22,0,58	0/1:20,0:19:73.39:73,0,225	0/0:17,0:17:9.68:0,10,208	0/0:28,0:27:37.29:0,37,457	0/0:26,0:25:58.88:0,59,832	1/1:13,0:12:22.64:170,23,0	1/1:17,1:18:22.38:164,22,0	0/0:19,0:19:34.48:0,34,599	0/1:17,0:17:72.64:73,0,159	0/0:13,0:13:26.22:0,26,279	0/0:8,0:8:23.48:0,23,221
chr10	70336850	.	T	TTG	389.70	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=1.832;DP=630;FS=2.549;HRun=0;HaplotypeScore=137.2903;InbreedingCoeff=0.4367;MQ=58.43;MQ0=13;MQRankSum=-0.567;QD=1.48;ReadPosRankSum=-1.252;VQSLOD=2.3022;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:6.58:7,0,55	0/0:14,0:14:10.17:0,10,44	0/0:23,0:14:6:0,6,57	0/0:28,0:18:0.84:0,1,2	0/1:21,0:20:10.76:11,0,30	0/0:36,1:39:26.09:0,26,646	0/0:22,0:22:42.12:0,42,485	1/1:44,0:43:8.26:65,8,0	1/1:2,14:16:18.04:281,18,0	0/0:18,0:19:38.84:0,39,394	0/0:29,1:30:9.94:0,10,508	0/0:20,0:21:25.68:0,26,378	0/0:20,0:20:16.16:0,16,71	0/0:26,0:27:18.35:0,18,578	0/0:35,0:34:80.20:0,80,864	0/0:19,0:23:56.66:0,57,594	0/1:19,0:17:11.99:12,0,17	0/0:10,0:9:8.94:0,9,46	1/1:22,0:20:0.89:35,1,0	1/1:18,0:18:0.34:1,0,0	1/1:29,0:28:7.33:46,7,0	0/0:25,0:25:44.25:0,44,433	1/1:13,0:12:0.47:1,0,0	1/1:18,0:18:4.59:24,5,0	0/0:18,0:19:23.90:0,24,257	1/1:17,0:17:1.06:25,1,0	0/1:12,0:12:12.65:41,0,13	0/0:8,0:8:3.27:0,3,14
chr10	70336874	.	GTCTGTGTGTGTC	G	5071.13	PASS	AB=0.932;AC=26;AF=0.464;AN=56;BaseQRankSum=9.039;DP=609;FS=11.058;HRun=0;HaplotypeScore=210.3702;InbreedingCoeff=0.5354;MQ=53.02;MQ0=15;MQRankSum=-7.237;QD=16.52;ReadPosRankSum=-6.511;VQSLOD=0.4768;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:40:21.97:630,22,0	1/1:0,12:12:14.98:479,15,0	0/0:22,0:11:25.43:0,25,385	0/1:21,0:7:10.46:63,0,10	1/1:22,0:21:30.01:512,30,0	0/0:37,0:36:82.83:0,83,3688	0/0:22,0:22:60.17:0,60,2154	1/1:32,0:29:80.65:704,81,0	0/0:23,0:23:40.01:0,40,1269	0/0:21,0:21:60.20:0,60,2406	0/0:35,0:35:83.25:0,83,2970	0/0:20,0:20:54.18:0,54,2286	1/1:23,0:23:32.95:584,33,0	0/0:26,0:25:46.22:0,46,2945	0/0:34,0:33:81.52:0,82,4513	0/0:23,0:23:63.21:0,63,2937	1/1:21,0:19:2.92:266,3,0	0/1:7,0:8:67.16:99,0,67	0/1:15,0:11:33.38:207,0,33	1/1:17,0:19:33.02:316,33,0	0/1:21,0:20:9.18:177,0,9	0/0:23,0:23:62.99:0,63,2480	1/1:10,0:9:5.99:49,6,0	1/1:21,0:21:11.64:100,12,0	0/0:15,0:15:35.20:0,35,1156	0/1:15,0:16:50.13:265,0,50	1/1:17,0:19:43.13:518,43,0	0/1:4,0:5:44.75:102,0,45
chr10	70336882	.	GTGTC	G	3061.92	PASS	AB=0.826;AC=27;AF=0.500;AN=54;BaseQRankSum=13.238;DP=590;FS=1.350;HRun=0;HaplotypeScore=130.9580;InbreedingCoeff=0.9167;MQ=55.57;MQ0=11;MQRankSum=-8.869;QD=12.01;ReadPosRankSum=-2.304;VQSLOD=3.1683;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,38:40:30.01:479,30,0	1/1:12,0:12:12.03:136,12,0	0/0:26,0:15:35.48:0,35,633	0/0:22,0:10:10.26:0,10,197	1/1:1,17:17:17.85:251,18,0	0/0:35,0:34:90.21:0,90,1782	0/0:20,0:20:54.12:0,54,1158	1/1:24,0:21:44.50:306,45,0	0/0:22,0:22:41.85:0,42,997	0/0:23,0:23:66.14:0,66,1438	0/0:35,0:35:68.24:0,68,1956	0/0:19,0:19:36.26:0,36,1152	1/1:2,19:21:18.06:327,18,0	0/0:27,0:26:71.87:0,72,1430	0/0:34,0:34:95.03:0,95,2227	0/0:24,0:24:69.14:0,69,1401	0/1:15,4:17:0.07:168,0,0	1/1:9,0:8:17.92:207,18,0	1/1:13,0:10:22.70:169,23,0	1/1:18,1:19:30.82:226,31,0	1/1:20,0:19:18.08:136,18,0	0/0:23,0:23:60.16:0,60,1352	./.	1/1:1,15:16:2.73:18,3,0	0/0:14,0:14:29.09:0,29,608	1/1:17,1:18:39.16:327,39,0	1/1:19,2:21:48.58:394,49,0	1/1:4,1:5:12.01:134,12,0
chr10	70336897	.	T	TGTGTGC	2350.60	PASS	AB=0.948;AC=22;AF=0.393;AN=56;BaseQRankSum=3.379;DP=598;FS=2.499;HRun=0;HaplotypeScore=154.7662;InbreedingCoeff=0.4308;MQ=67.33;MQ0=5;MQRankSum=-1.034;QD=9.29;ReadPosRankSum=-2.531;VQSLOD=2.4841;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:40:19.61:163,0,20	0/1:10,0:10:21.05:21,0,76	0/0:38,0:25:65.54:0,66,1030	0/0:32,0:20:48.99:0,49,561	0/1:22,0:21:19.82:77,0,20	0/0:35,0:34:84.15:0,84,1491	0/0:22,0:22:54.10:0,54,1041	1/1:25,0:23:53.78:474,54,0	0/0:20,0:20:45.08:0,45,902	0/0:29,0:29:75.03:0,75,1370	0/0:34,0:34:93.10:0,93,1871	0/0:20,0:20:48.16:0,48,1065	0/1:24,0:24:11.44:165,0,11	0/0:22,0:22:55.05:0,55,1149	0/0:36,0:36:93.66:0,94,1967	0/0:22,0:22:60.19:0,60,1249	0/1:7,13:18:11.35:49,0,11	0/1:7,0:7:27.53:73,0,28	1/1:11,0:10:22.77:201,23,0	1/1:15,0:15:35.04:293,35,0	1/1:15,0:14:5.83:146,6,0	0/0:21,0:21:57.15:0,57,1142	1/1:12,0:12:11.89:84,12,0	0/1:16,0:16:0:0,0,0	0/0:14,0:14:24.54:0,25,492	1/1:17,0:17:47.16:428,47,0	1/1:16,0:16:4.52:331,5,0	0/1:3,0:3:7.99:37,0,8
chr10	70337688	.	C	CA	6139.23	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-13.813;DP=689;FS=0.327;HRun=6;HaplotypeScore=64.2730;InbreedingCoeff=0.9958;MQ=77.09;MQ0=0;MQRankSum=-0.228;QD=32.14;ReadPosRankSum=-1.221;VQSLOD=4.6831;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:87.19:0,87,887	1/1:0,12:13:39.12:487,39,0	0/0:15,0:15:13.09:0,13,281	0/0:15,0:15:34.99:0,35,302	0/0:32,0:32:84.17:0,84,850	0/0:33,0:33:87.19:0,87,887	0/0:21,0:21:57.12:0,57,581	1/1:4,31:35:93.27:1143,93,0	0/0:32,0:32:84.17:0,84,850	0/0:32,0:32:90.19:0,90,913	0/0:26,0:26:69.13:0,69,690	0/0:19,0:19:51.11:0,51,520	0/0:21,0:21:60.12:0,60,605	0/0:24,0:24:63.14:0,63,643	0/0:29,0:29:78.17:0,78,796	0/0:34,0:34:96.21:0,96,980	0/0:28,0:28:60.13:0,60,612	1/1:0,9:9:27.08:328,27,0	1/1:2,11:13:33.11:413,33,0	1/1:4,22:26:63.20:792,63,0	1/1:0,23:23:60.19:755,60,0	0/0:23,0:23:63.14:0,63,642	0/0:33,0:33:99:0,99,1003	0/0:18,0:18:42.06:0,42,419	0/0:29,0:29:87.20:0,87,888	1/1:2,19:21:29.56:674,30,0	1/1:5,36:40:93.30:1170,93,0	1/1:0,10:10:30.10:377,30,0
chr10	70338078	.	AC	A	7244.64	PASS	AB=0.520;AC=17;AF=0.304;AN=56;BaseQRankSum=17.794;DP=760;FS=2.090;HRun=3;HaplotypeScore=90.9712;InbreedingCoeff=0.9216;MQ=82.00;MQ0=0;MQRankSum=-0.721;QD=34.01;ReadPosRankSum=-0.605;VQSLOD=4.8046;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:89,0:89:99:0,256,3633	1/1:0,17:17:51.16:632,51,0	0/0:23,0:23:43.02:0,43,866	0/0:19,0:19:47.96:0,48,658	0/0:37,0:37:90.26:0,90,1262	0/0:17,0:17:48.16:0,48,691	0/0:11,0:11:33.10:0,33,458	1/1:0,36:36:99:1313,108,0	0/0:24,0:24:69.23:0,69,993	0/0:29,0:29:84.28:0,84,1193	0/0:19,0:19:57.18:0,57,805	0/0:20,0:20:60.20:0,60,864	0/0:39,0:39:99:0,117,1683	0/0:24,0:24:69.23:0,69,994	0/0:22,0:22:66.22:0,66,950	0/0:20,0:20:60.20:0,60,863	0/0:60,0:60:99:0,178,2494	1/1:0,16:16:45.14:558,45,0	1/1:0,20:19:57.15:689,57,0	1/1:1,26:27:75.24:930,75,0	1/1:1,18:19:48.15:595,48,0	0/0:22,0:22:66.21:0,66,931	0/0:30,0:30:81.27:0,81,1164	0/0:19,0:18:54.18:0,54,778	0/0:23,0:23:69.23:0,69,993	0/1:2,24:26:11.19:780,0,11	1/1:0,37:37:99:1264,102,0	1/1:0,15:15:39.12:483,39,0
chr10	70338272	.	CTTTT	C	4342.02	PASS	AB=0.583;AC=13;AF=0.232;AN=56;BaseQRankSum=6.824;DP=650;FS=0.384;HRun=15;HaplotypeScore=124.1038;InbreedingCoeff=0.8744;MQ=64.72;MQ0=2;MQRankSum=0.657;QD=23.22;ReadPosRankSum=7.495;VQSLOD=3.2374;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,37:46:97.32:1277,97,0	0/1:4,1:14:9.93:65,0,10	0/0:21,0:14:20.94:0,21,286	0/0:14,0:11:2.53:0,3,206	1/1:9,20:35:27.01:631,27,0	0/0:19,0:20:45.12:0,45,814	0/0:25,0:28:70.32:0,70,1503	0/0:21,0:23:51.16:0,51,1052	0/0:17,0:20:47.99:0,48,839	0/0:19,0:23:54.15:0,54,938	0/0:15,0:20:49.23:0,49,1053	0/0:18,0:20:51.17:0,51,1015	1/1:9,11:20:42.02:541,42,0	0/0:23,0:25:57.19:0,57,1130	0/0:22,0:24:63.16:0,63,1250	0/0:21,0:23:66.23:0,66,1375	1/1:7,24:31:72.12:980,72,0	0/0:18,0:20:44.98:0,45,556	0/0:20,0:21:51.16:0,51,906	0/0:38,0:39:93.22:0,93,1767	0/0:10,0:11:24.08:0,24,487	0/0:19,0:19:48.12:0,48,914	1/1:5,12:17:26.18:367,26,0	1/1:7,17:24:36.04:482,36,0	0/0:13,0:13:33.10:0,33,653	0/0:28,0:30:78.12:0,78,1411	0/0:31,0:33:90.28:0,90,1755	0/0:12,0:12:30.10:0,30,653
chr10	70338461	.	CTAA	C	8876.71	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.575;DP=726;FS=0.000;HRun=0;HaplotypeScore=110.0800;InbreedingCoeff=0.9798;MQ=77.89;MQ0=0;MQRankSum=-4.286;QD=47.72;ReadPosRankSum=0.910;VQSLOD=6.6689;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:99:0,129,2951	0/0:18,0:18:54.19:0,54,1255	0/0:18,0:18:50.47:0,50,1004	0/0:17,0:17:18.45:0,18,639	0/0:30,0:30:90.31:0,90,2127	0/0:23,0:23:69.17:0,69,1578	0/0:33,0:33:96.33:0,96,2248	1/1:0,31:31:93.24:1474,93,0	0/0:32,0:32:96.33:0,96,2254	0/0:22,0:22:63.21:0,63,1419	0/0:18,0:18:54.17:0,54,1229	0/0:31,0:31:93.28:0,93,2129	0/0:40,0:40:99:0,120,2788	0/0:37,0:37:99:0,105,2338	0/0:35,0:35:99:0,105,2390	0/0:32,0:32:96.29:0,96,2117	0/0:30,0:30:90.31:0,90,2124	1/1:0,8:8:18.06:317,18,0	1/1:1,22:23:66.20:1109,66,0	1/1:0,29:29:84.29:1479,84,0	1/1:1,44:45:99:2011,115,0	0/0:17,0:17:51.18:0,51,1206	0/0:20,0:20:60.21:0,60,1405	0/0:22,0:22:66.20:0,66,1471	0/0:21,0:21:63.22:0,63,1490	1/1:0,18:18:54.19:952,54,0	1/1:0,30:30:81.28:1429,81,0	1/1:0,2:2:6.02:106,6,0
chr10	70339085	.	TAGCCCATGAGA	T	8821.13	PASS	AB=0.526;AC=17;AF=0.304;AN=56;BaseQRankSum=14.467;DP=569;FS=6.157;HRun=0;HaplotypeScore=197.0117;InbreedingCoeff=0.8574;MQ=86.61;MQ0=0;MQRankSum=-12.942;QD=71.72;ReadPosRankSum=2.407;VQSLOD=4.3919;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.33:0,96,5267	1/1:2,10:12:27.09:870,27,0	0/0:16,0:16:48.16:0,48,2399	0/0:25,0:25:69.21:0,69,3034	0/0:31,0:31:93.30:0,93,5162	0/0:34,0:34:99:0,102,5596	0/0:19,0:19:57.20:0,57,2858	1/1:9,12:21:33.08:1027,33,0	0/0:20,0:20:60.21:0,60,3309	0/0:26,0:26:75.26:0,75,4141	0/0:26,0:26:78.25:0,78,4141	0/0:21,0:21:63.18:0,63,3156	0/0:29,0:29:87.28:0,87,4722	0/0:17,0:17:48.16:0,48,2671	0/0:28,0:28:81.26:0,81,4226	0/0:17,0:17:48.16:0,48,2639	0/0:19,0:19:57.20:0,57,3127	1/1:1,3:4:6.02:218,6,0	1/1:1,8:10:24.08:870,24,0	1/1:1,19:20:45.09:1480,45,0	1/1:1,4:5:3.01:109,3,0	0/0:26,0:26:72.25:0,72,3825	0/0:23,0:23:69.22:0,69,3628	0/0:16,0:16:45.15:0,45,2576	0/0:21,0:21:60.21:0,60,3437	0/1:3,27:30:90.42:2705,0,90	1/1:1,15:16:36.12:1252,36,0	1/1:1,4:5:9.03:291,9,0
chr10	70339359	.	G	GCAGC	10961.93	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=4.739;DP=690;FS=0.000;HRun=0;HaplotypeScore=136.3013;InbreedingCoeff=0.9985;MQ=85.59;MQ0=0;MQRankSum=-9.275;QD=55.36;ReadPosRankSum=-1.434;VQSLOD=5.6671;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,120,2097	1/1:1,10:12:30.10:779,30,0	0/0:24,0:24:51.17:0,51,878	0/0:27,0:27:29.58:0,30,773	0/0:30,0:30:84.28:0,84,1487	0/0:18,0:18:51.14:0,51,839	0/0:27,0:27:69.24:0,69,1240	1/1:17,14:32:69.22:1561,69,0	0/0:27,0:27:75.26:0,75,1348	0/0:25,0:25:63.21:0,63,1107	0/0:21,0:21:54.16:0,54,936	0/0:23,0:23:60.21:0,60,1077	0/0:28,0:28:78.25:0,78,1350	0/0:33,0:33:81.61:0,82,1495	0/0:21,0:21:60.15:0,60,1044	0/0:22,0:22:66.21:0,66,1156	0/0:35,0:35:99:0,102,1775	1/1:0,16:17:39.13:1013,39,0	1/1:5,17:22:57.18:1401,57,0	1/1:3,18:22:48.16:1244,48,0	1/1:13,23:36:51.18:1324,51,0	0/0:20,0:20:54.18:0,54,962	0/0:15,0:15:39.12:0,39,672	0/0:23,0:23:69.22:0,69,1210	0/0:28,0:28:69.24:0,69,1240	1/1:4,15:19:51.18:1314,51,0	1/1:5,23:31:72.21:1860,72,0	1/1:0,6:6:18.06:467,18,0
chr10	70339703	.	TA	T	6000.40	PASS	AB=0.785;AC=31;AF=0.554;AN=56;BaseQRankSum=9.821;DP=593;FS=0.000;HRun=11;HaplotypeScore=74.1590;InbreedingCoeff=0.7696;MQ=69.65;MQ0=0;MQRankSum=-0.902;QD=16.76;ReadPosRankSum=0.951;VQSLOD=5.5470;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,32:37:82.87:662,83,0	1/1:0,7:7:20.98:172,21,0	0/1:18,1:17:32.85:33,0,152	0/0:13,0:11:11.60:0,12,86	1/1:5,15:20:38.84:311,39,0	0/0:20,1:21:34.52:0,35,545	0/1:12,2:14:13.22:13,0,274	1/1:6,20:27:58.42:463,58,0	0/0:23,0:23:57.11:0,57,596	0/0:18,0:18:45.11:0,45,480	0/0:24,0:25:50.50:0,50,724	0/0:19,0:19:51.08:0,51,530	1/1:2,21:24:59.90:490,60,0	0/0:18,0:18:26.39:0,26,465	0/0:24,0:24:63.15:0,63,666	0/0:25,0:25:72.17:0,72,760	1/1:4,19:23:53.93:443,54,0	1/1:6,16:22:13.47:313,13,0	1/1:4,15:19:44.91:365,45,0	1/1:2,19:22:58.85:460,59,0	0/1:2,16:18:13.02:318,0,13	0/0:22,0:22:60.12:0,60,628	1/1:4,18:23:50.60:418,51,0	1/1:2,18:20:47.93:394,48,0	0/0:25,0:27:77.80:0,78,759	1/1:3,22:25:65.88:537,66,0	1/1:5,19:24:41.94:345,42,0	1/1:2,12:14:6.99:263,7,0
chr10	70340272	.	A	AT	5227.85	PASS	AB=1.000;AC=19;AF=0.432;AN=44;BaseQRankSum=14.395;DP=403;FS=2.366;HRun=8;HaplotypeScore=81.0331;InbreedingCoeff=0.8930;MQ=75.97;MQ0=0;MQRankSum=-0.694;QD=25.75;ReadPosRankSum=1.266;VQSLOD=5.5733;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,5:7:15.04:173,15,0	0/1:8,0:8:6.27:6,0,119	0/0:8,0:8:3.84:0,4,22	./.	0/0:22,0:22:48.01:0,48,439	0/0:15,0:15:42.02:0,42,384	1/1:11,23:33:47.58:772,48,0	0/0:15,0:15:39.01:0,39,357	0/0:32,0:32:84.02:0,84,764	0/0:13,0:13:33.02:0,33,302	0/0:13,0:13:36.02:0,36,330	./.	0/0:14,0:14:42.01:0,42,380	0/0:12,0:12:33.02:0,33,302	0/0:18,0:18:51.02:0,51,467	./.	1/1:5,17:22:45.13:519,45,0	1/1:6,23:29:17.28:707,17,0	1/1:2,25:27:75.14:836,75,0	1/1:2,12:14:30.09:346,30,0	0/0:17,0:17:32.99:0,33,298	./.	./.	0/0:21,0:21:51:0,51,461	1/1:3,20:23:63.10:709,63,0	1/1:6,24:30:78.20:882,78,0	1/1:0,9:9:24.07:277,24,0
chr10	70341601	.	G	GC	14634.87	PASS	AB=0.550;AC=29;AF=0.518;AN=56;BaseQRankSum=-6.134;DP=694;FS=2.825;HRun=3;HaplotypeScore=73.9551;InbreedingCoeff=0.9616;MQ=80.26;MQ0=1;MQRankSum=-4.585;QD=36.68;ReadPosRankSum=0.279;VQSLOD=5.2929;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,49:49:99:1848,132,0	1/1:0,11:11:33.11:462,33,0	0/0:25,0:25:63.09:0,63,688	0/0:21,0:20:53.33:0,53,581	1/1:1,23:24:54.18:752,54,0	0/0:26,0:26:78.24:0,78,934	0/0:23,0:23:69.21:0,69,827	1/1:1,39:40:99:1584,117,0	0/0:24,0:24:66.20:0,66,791	0/0:25,0:25:69.21:0,69,828	0/0:13,0:13:33.10:0,33,396	0/0:31,0:30:87.27:0,87,1043	1/1:1,25:26:66.22:924,66,0	0/0:18,0:18:54.17:0,54,648	0/0:30,0:30:90.28:0,90,1079	0/0:28,0:28:84.23:0,84,984	1/1:1,25:26:60.20:840,60,0	1/1:1,18:19:54.18:756,54,0	1/1:2,13:15:42.13:570,42,0	1/1:1,31:32:93.30:1285,93,0	1/1:3,28:31:81.27:1134,81,0	0/0:12,0:12:36.11:0,36,431	1/1:0,23:23:63.21:872,63,0	1/1:2,29:31:75.21:1028,75,0	0/0:19,0:19:57.17:0,57,684	0/1:4,18:22:0.47:696,0,0	1/1:1,42:43:99:1590,114,0	1/1:0,7:7:21.07:294,21,0
chr10	70341965	.	CGTGTGTGTGTGTGT	C	2444.15	PASS	AB=0.708;AC=17;AF=0.315;AN=54;BaseQRankSum=3.050;DP=571;FS=12.265;HRun=0;HaplotypeScore=214.4772;InbreedingCoeff=0.7156;MQ=67.99;MQ0=9;MQRankSum=-4.459;QD=16.08;ReadPosRankSum=-0.634;VQSLOD=1.6084;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:28:18.06:0,18,426	1/1:5,0:6:2.94:18,3,0	./.	0/0:36,0:25:6.02:0,6,113	0/0:21,0:28:21.07:0,21,469	0/0:17,0:18:33.11:0,33,1730	0/0:14,0:15:27.09:0,27,1415	1/1:24,0:24:6.98:72,7,0	0/0:18,0:21:24.08:0,24,1407	0/0:27,0:27:33.08:0,33,1677	0/0:15,0:16:21.07:0,21,1106	0/0:16,0:18:21.04:0,21,443	0/0:13,0:20:24.08:0,24,556	0/0:11,0:18:21.07:0,21,417	0/0:22,0:22:39.13:0,39,2108	0/0:20,0:21:21.07:0,21,1051	0/0:14,0:23:39.13:0,39,1197	1/1:6,5:11:1.75:115,2,0	1/1:13,3:16:0.37:21,0,0	1/1:15,7:22:18.06:639,18,0	1/1:20,0:22:6.02:156,6,0	0/0:16,0:22:21.02:0,21,358	0/0:15,0:20:36.12:0,36,1385	0/0:12,0:17:15.02:0,15,666	0/0:21,0:22:39.12:0,39,1804	0/1:10,6:17:99:660,0,167	1/1:15,9:24:18.06:704,18,0	1/1:8,2:10:5.38:233,5,0
chr10	70343615	.	GTATGTATGTATGTA	G	4269.01	PASS	AB=0.725;AC=13;AF=0.232;AN=56;BaseQRankSum=5.999;DP=529;FS=0.000;HRun=0;HaplotypeScore=185.0166;InbreedingCoeff=0.6641;MQ=54.35;MQ0=16;MQRankSum=-0.810;QD=33.09;ReadPosRankSum=-1.778;VQSLOD=3.6470;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:41.96:0,42,2700	0/0:9,0:9:18.06:0,18,631	0/0:19,0:15:45.15:0,45,1671	0/0:21,0:18:54.19:0,54,2163	0/0:13,0:12:27.09:0,27,1232	0/0:30,0:28:37.43:0,37,2800	0/0:27,0:24:56.97:0,57,1948	1/1:4,17:20:47.99:925,48,0	0/0:24,0:23:51.17:0,51,2540	0/0:12,0:12:33:0,33,1200	0/0:12,0:12:27.09:0,27,939	0/0:24,0:23:54.14:0,54,2289	0/0:14,0:14:38.95:0,39,1733	0/0:20,0:20:28.75:0,29,1868	0/0:22,0:22:46.26:0,46,2087	0/0:17,0:17:40.07:0,40,1811	0/0:29,0:29:9.33:0,9,1981	0/1:4,6:11:99:134,0,254	1/1:2,6:8:16.20:368,16,0	1/1:17,0:16:21.06:565,21,0	0/1:24,0:22:14.65:742,0,15	0/0:14,0:14:30.10:0,30,1563	0/0:16,0:16:36.11:0,36,1526	0/0:33,0:30:57.05:0,57,3233	0/0:8,0:8:23.75:0,24,882	0/1:5,14:18:99:544,0,140	1/1:19,0:17:32.32:709,32,0	1/1:8,0:7:5.78:281,6,0
chr10	70343737	.	G	GA	7762.12	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-3.983;DP=723;FS=16.417;HRun=0;HaplotypeScore=87.0250;InbreedingCoeff=0.9563;MQ=90.59;MQ0=1;MQRankSum=-2.756;QD=39.01;ReadPosRankSum=-0.255;VQSLOD=3.1443;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:99:0,111,1464	0/0:7,0:7:21.07:0,21,291	0/0:31,0:31:87.11:0,87,1087	0/0:29,0:29:58.13:0,58,804	0/0:28,0:28:78.06:0,78,1079	0/0:22,0:22:66.21:0,66,900	0/0:16,0:16:44.36:0,44,593	1/1:1,33:34:99:1359,99,0	0/0:26,0:26:75.25:0,75,1041	0/0:31,0:31:93.30:0,93,1268	0/0:14,0:14:42.13:0,42,572	0/0:30,0:30:87.24:0,87,1143	0/0:30,0:30:90.29:0,90,1233	0/0:28,0:28:84.28:0,84,1154	0/0:29,0:29:75.24:0,75,1031	0/0:28,0:28:84.27:0,84,1156	0/0:20,0:20:51.14:0,51,677	1/1:0,10:10:27.09:413,27,0	1/1:0,14:14:42.11:599,42,0	1/1:0,34:34:99:1489,99,0	1/1:0,40:40:87.30:1331,87,0	0/0:27,0:27:81.26:0,81,1111	0/0:21,0:21:63.19:0,63,841	0/0:34,0:34:99:0,99,1332	0/0:34,0:34:99:0,102,1371	1/1:3,27:30:0.37:1065,0,0	1/1:1,27:27:72.24:1093,72,0	1/1:0,9:9:27.09:413,27,0
chr10	70344989	.	GT	G	4003.73	PASS	AB=0.857;AC=17;AF=0.304;AN=56;BaseQRankSum=4.113;DP=630;FS=1.093;HRun=10;HaplotypeScore=78.5820;InbreedingCoeff=0.9115;MQ=72.66;MQ0=0;MQRankSum=-0.762;QD=19.72;ReadPosRankSum=-0.902;VQSLOD=4.0020;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:25:62.50:0,62,312	0/0:5,0:5:15.03:0,15,157	0/1:10,2:12:25.13:25,0,170	0/0:13,0:14:23.60:0,24,229	0/0:3,0:19:51.64:0,52,292	0/0:35,0:35:99:0,99,1070	0/0:25,0:25:66.18:0,66,730	1/1:11,27:38:80.93:695,81,0	0/0:22,0:22:60.14:0,60,648	0/0:25,1:26:33.77:0,34,575	0/0:23,1:25:45.96:0,46,709	0/0:28,1:29:55.15:0,55,828	0/0:3,0:19:45.46:0,45,263	0/0:21,0:21:63.15:0,63,686	0/0:20,0:20:57.15:0,57,631	0/0:19,0:19:53.16:0,53,561	0/0:8,0:33:74.32:0,74,406	1/1:3,25:28:71.98:625,72,0	1/1:4,18:22:56.92:479,57,0	1/1:0,23:23:65.98:573,66,0	1/1:2,7:9:20.99:182,21,0	0/0:21,0:21:60.15:0,60,656	0/0:2,0:21:45.45:0,45,227	0/0:4,0:19:40.11:0,40,237	0/0:27,1:28:49.15:0,49,770	1/1:6,32:38:65.77:800,66,0	1/1:3,21:24:50.98:443,51,0	1/1:0,9:9:21:182,21,0
chr10	70347484	.	G	GT	3737.35	PASS	AB=0.811;AC=16;AF=0.286;AN=56;BaseQRankSum=-7.140;DP=597;FS=1.224;HRun=10;HaplotypeScore=79.9288;InbreedingCoeff=0.8510;MQ=71.79;MQ0=1;MQRankSum=-1.529;QD=18.78;ReadPosRankSum=-2.732;VQSLOD=3.3741;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:41.95:0,42,345	0/0:9,0:9:20.97:0,21,172	0/1:20,0:17:11.36:11,0,101	0/0:12,0:11:19.37:0,19,128	0/0:35,0:35:86.08:0,86,694	0/0:28,0:27:63.39:0,63,518	0/0:16,0:16:38.92:0,39,317	1/1:8,27:35:54:765,54,0	0/0:13,0:13:32.96:0,33,271	0/0:29,0:30:88.92:0,89,716	0/0:22,0:23:59.01:0,59,489	0/0:16,0:16:46.99:0,47,375	0/0:19,0:19:39.78:0,40,362	0/0:18,0:18:47.93:0,48,394	0/0:19,0:19:47.91:0,48,391	0/0:19,0:19:50.94:0,51,419	0/0:27,0:27:71.89:0,72,591	1/1:3,19:22:54.14:576,54,0	1/1:5,12:17:19.38:393,19,0	1/1:7,19:26:49.67:512,50,0	1/1:4,8:12:18.05:192,18,0	0/0:24,0:26:49.93:0,50,396	0/0:25,0:25:47.88:0,48,390	0/0:17,0:17:41.93:0,42,345	0/0:30,0:30:74.88:0,75,613	0/1:9,14:23:3.21:405,0,3	1/1:3,31:34:72.14:756,72,0	1/1:5,5:10:12.03:128,12,0
chr10	70349282	.	T	TATAC	5602.31	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-9.405;DP=652;FS=0.000;HRun=0;HaplotypeScore=117.7232;InbreedingCoeff=0.8999;MQ=63.08;MQ0=3;MQRankSum=-1.910;QD=19.59;ReadPosRankSum=-1.731;VQSLOD=3.7546;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:22:15.88:0,16,159	1/1:3,7:10:8.95:212,9,0	0/0:10,0:5:2.99:0,3,24	0/1:19,0:7:0:0,0,0	0/0:38,0:39:69.14:0,69,937	1/1:8,12:21:18.06:424,18,0	1/1:9,3:12:3.01:71,3,0	1/1:46,0:45:29.94:319,30,0	0/0:15,0:16:30.09:0,30,442	0/0:28,0:30:51.15:0,51,752	0/0:41,0:41:84.23:0,84,1205	0/0:19,0:19:36.10:0,36,515	0/0:9,0:25:21.02:0,21,196	0/0:18,0:18:27.08:0,27,397	0/0:22,0:22:37.65:0,38,519	0/0:16,0:17:30.10:0,30,448	0/0:9,0:23:24.01:0,24,219	1/1:16,0:28:8:69,8,0	1/1:11,10:21:30.09:617,30,0	1/1:23,22:46:52.17:1337,52,0	1/1:6,9:16:21.07:495,21,0	0/0:9,0:9:18.05:0,18,257	0/0:11,0:26:27.03:0,27,252	0/0:6,0:21:26.98:0,27,242	0/0:28,0:28:55.95:0,56,755	1/1:10,12:22:33.10:730,33,0	1/1:18,17:35:36.12:834,36,0	1/1:0,10:10:21.07:495,21,0
chr10	70349481	.	CTGAT	C	8299.62	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.983;DP=573;FS=0.000;HRun=0;HaplotypeScore=111.0014;InbreedingCoeff=0.9941;MQ=80.44;MQ0=0;MQRankSum=-8.072;QD=48.82;ReadPosRankSum=0.897;VQSLOD=5.6486;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.19:0,57,1560	1/1:3,7:10:21.07:407,21,0	0/0:16,0:16:47.95:0,48,1192	0/0:16,0:16:48.16:0,48,1159	0/0:27,0:27:78.25:0,78,2078	0/0:27,0:27:75.22:0,75,1925	0/0:15,0:15:45.15:0,45,1232	1/1:4,35:39:99:2011,105,0	0/0:16,0:16:48.16:0,48,1313	0/0:31,0:31:90.27:0,90,2409	0/0:28,0:28:81.27:0,81,2160	0/0:18,0:18:54.19:0,54,1479	0/0:23,0:23:69.24:0,69,1888	0/0:18,0:18:54.17:0,54,1405	0/0:21,0:21:57.16:0,57,1432	0/0:22,0:22:63.22:0,63,1725	0/0:13,0:13:39.13:0,39,1032	0/0:12,0:12:33.11:0,33,903	1/1:5,18:23:48.14:881,48,0	1/1:0,27:27:72.18:1353,72,0	1/1:1,17:18:45.15:871,45,0	0/0:25,0:25:75.26:0,75,2053	0/0:25,0:25:72.25:0,72,1959	0/0:11,0:11:33.11:0,33,904	0/0:18,0:18:51.18:0,51,1362	1/1:1,16:17:48.13:861,48,0	1/1:0,31:31:87.30:1683,87,0	1/1:0,5:5:12.04:232,12,0
chr10	70350088	.	C	CA	2482.08	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-5.388;DP=380;FS=1.057;HRun=9;HaplotypeScore=57.6113;InbreedingCoeff=0.9198;MQ=62.99;MQ0=2;MQRankSum=-3.797;QD=16.66;ReadPosRankSum=-2.888;VQSLOD=3.0736;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:12:0,12,106	1/1:4,4:8:14.97:157,15,0	0/0:18,0:9:20.83:0,21,159	0/1:21,0:6:0.39:1,0,0	0/0:17,0:17:29.97:0,30,267	0/0:16,0:16:38.98:0,39,339	0/0:15,0:15:38.98:0,39,339	1/1:11,32:41:98.99:1040,99,0	0/0:13,0:13:35.99:0,36,310	0/0:11,0:11:29.98:0,30,258	0/0:10,0:10:17.97:0,18,156	0/0:10,0:10:26.98:0,27,230	0/0:13,0:13:18.33:0,18,219	0/0:11,0:11:29.98:0,30,256	0/0:19,0:19:50.91:0,51,434	0/0:14,0:14:32.98:0,33,286	0/0:10,0:10:17.78:0,18,160	1/1:3,2:5:7.26:69,7,0	1/1:12,8:20:32.98:326,33,0	1/1:5,10:15:27.07:298,27,0	1/1:3,3:6:6.02:66,6,0	0/0:11,0:11:32.99:0,33,286	0/0:12,0:12:29.29:0,29,271	0/0:11,0:12:28.55:0,29,202	0/0:14,0:14:38.98:0,39,335	1/1:3,12:15:36.10:398,36,0	1/1:5,6:11:21.06:231,21,0	1/1:1,3:4:9.02:100,9,0
chr10	70350101	.	TTCTC	T	829.10	PASS	AB=0.987;AC=16;AF=0.296;AN=54;BaseQRankSum=6.714;DP=559;FS=51.398;HRun=0;HaplotypeScore=126.9554;InbreedingCoeff=0.4246;MQ=50.27;MQ0=14;MQRankSum=-4.076;QD=3.43;ReadPosRankSum=0.935;VQSLOD=0.2885;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,1:8:8.83:124,9,0	0/0:8,0:8:8.47:0,8,76	0/1:37,0:11:2.48:2,0,116	0/0:38,0:6:2.95:0,3,92	1/1:16,3:18:18.29:229,18,0	0/1:35,0:30:9.89:10,0,865	0/0:28,0:23:16.77:0,17,917	0/0:43,0:41:59.22:0,59,606	0/0:13,0:13:24.08:0,24,551	0/0:12,0:12:26.03:0,26,746	0/1:11,1:12:18.07:18,0,654	0/0:17,0:14:8.11:0,8,363	1/1:28,3:29:18.45:242,18,0	0/1:28,0:25:24.39:24,0,518	0/0:20,0:19:48.16:0,48,1134	0/0:17,0:17:35.91:0,36,792	0/1:17,0:16:10.71:70,0,11	0/1:9,0:6:4.16:4,0,69	0/0:17,0:16:19.92:0,20,151	0/0:12,0:12:8.82:0,9,90	./.	0/0:32,0:29:30.63:0,31,640	1/1:13,0:13:18.01:232,18,0	1/1:31,0:29:7.42:45,7,0	0/0:16,0:17:41.93:0,42,941	0/0:22,0:20:26.50:0,26,275	0/0:10,0:10:6.44:0,6,58	0/0:6,0:6:12:0,12,112
chr10	70350118	.	TC	T	1330.77	PASS	AB=0.852;AC=23;AF=0.411;AN=56;BaseQRankSum=8.924;DP=593;FS=7.961;HRun=2;HaplotypeScore=109.5422;InbreedingCoeff=0.3114;MQ=41.47;MQ0=21;MQRankSum=-7.548;QD=3.98;ReadPosRankSum=0.097;VQSLOD=0.0049;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,1:8:2.17:33,0,2	0/1:5,2:7:16.57:17,0,75	0/0:42,1:7:11.91:0,12,127	0/1:55,0:5:0.41:0,0,65	1/1:18,9:26:11.95:75,12,0	0/1:41,0:36:8.05:8,0,615	0/0:36,0:28:40.16:0,40,682	0/1:22,10:29:99:384,0,265	0/0:13,0:12:30.07:0,30,400	0/0:17,0:17:42.13:0,42,642	0/0:15,0:15:40.95:0,41,568	0/0:20,0:16:19.60:0,20,302	1/1:25,3:25:23.42:154,23,0	0/0:27,0:24:18.41:0,18,393	0/0:20,0:19:51.16:0,51,730	0/0:15,0:15:41.16:0,41,552	0/1:15,2:15:24.84:97,0,25	1/1:7,1:5:5.04:38,5,0	1/1:9,6:13:8.62:301,9,0	0/1:6,3:9:8.34:54,0,8	0/1:3,1:3:0:0,0,0	0/0:35,0:31:35.81:0,36,482	1/1:11,5:15:8.76:60,9,0	0/1:35,1:34:1.82:3,0,2	0/0:18,0:18:46.92:0,47,628	0/1:13,3:14:58.76:166,0,59	0/1:2,2:4:10.22:47,0,10	1/1:4,1:4:10.86:70,11,0
chr10	70350119	.	C	CT	1752.13	PASS	AB=0.905;AC=24;AF=0.429;AN=56;BaseQRankSum=7.407;DP=595;FS=1.815;HRun=1;HaplotypeScore=109.0514;InbreedingCoeff=0.2964;MQ=41.04;MQ0=21;MQRankSum=-6.975;QD=5.23;ReadPosRankSum=-1.523;VQSLOD=-0.0994;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:8:2.16:40,2,0	0/1:5,2:7:36.12:36,0,53	0/0:45,0:7:11.91:0,12,127	0/1:58,0:5:0.41:0,0,64	1/1:25,2:27:2.68:118,3,0	0/1:39,2:36:42.95:43,0,592	0/0:36,0:28:39.25:0,39,649	0/1:28,2:27:99:407,0,214	0/0:13,0:12:30.07:0,30,387	0/0:17,0:17:49.56:0,50,643	0/0:15,0:15:43.90:0,44,579	0/0:19,0:15:24.44:0,24,297	1/1:25,1:25:18.39:221,18,0	0/0:27,0:24:33.89:0,34,401	0/0:20,0:19:51.16:0,51,698	0/0:15,0:15:42.10:0,42,553	0/1:17,0:15:17.22:104,0,17	1/1:6,2:5:1.17:37,1,0	1/1:11,5:14:23.25:351,23,0	0/1:8,1:9:8.16:54,0,8	0/1:4,0:3:0:0,0,0	0/0:34,1:31:36.95:0,37,475	1/1:12,0:13:10.67:67,11,0	0/1:37,0:34:0.43:0,0,4	0/0:18,0:18:48.06:0,48,629	0/1:8,7:13:54.76:229,0,55	0/1:3,1:4:10.01:54,0,10	1/1:2,3:4:12.04:163,12,0
chr10	70350132	.	CTT	C	1295.26	PASS	AB=0.978;AC=25;AF=0.446;AN=56;BaseQRankSum=10.125;DP=568;FS=1.751;HRun=3;HaplotypeScore=111.9696;InbreedingCoeff=0.6101;MQ=38.60;MQ0=31;MQRankSum=-9.783;QD=6.23;ReadPosRankSum=0.548;VQSLOD=0.1985;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:5:14.79:19,0,15	0/1:8,0:8:10.36:13,0,10	0/0:50,0:4:5.98:0,6,74	0/0:70,0:4:1.55:0,2,5	1/1:28,0:28:3.38:74,3,0	0/0:40,0:35:47.40:0,47,815	0/0:37,0:29:30.48:0,30,630	1/1:27,6:30:53.02:415,53,0	0/0:8,0:8:24.01:0,24,322	0/0:20,0:20:49.67:0,50,803	0/0:19,0:19:57.07:0,57,811	0/0:18,0:14:7.76:0,8,371	1/1:22,0:19:11.57:84,12,0	0/0:22,0:19:2.86:0,3,476	0/0:18,0:17:38.62:0,39,691	0/0:15,0:15:42.06:0,42,594	1/1:15,0:13:12.14:71,12,0	1/1:9,0:5:6.34:22,6,0	1/1:11,0:9:26.70:238,27,0	1/1:5,1:7:2.32:34,2,0	0/0:3,0:3:0:0,0,0	0/0:23,0:22:43.35:0,43,655	0/1:13,1:13:3.41:21,0,3	1/1:27,0:24:1.90:10,2,0	0/0:15,0:15:42.05:0,42,643	1/1:13,1:12:23.81:252,24,0	1/1:3,1:4:8.98:97,9,0	1/1:5,0:4:11.98:135,12,0
chr10	70350151	.	T	TTC	379.61	PASS	AB=0.966;AC=19;AF=0.352;AN=54;BaseQRankSum=10.260;DP=473;FS=17.966;HRun=0;HaplotypeScore=94.3585;InbreedingCoeff=0.1989;MQ=36.58;MQ0=37;MQRankSum=-8.901;QD=2.31;ReadPosRankSum=-0.364;VQSLOD=0.7331;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:7:6.81:0,7,74	0/0:3,0:2:4.56:0,5,33	0/0:39,0:2:3.01:0,3,41	./.	0/1:22,0:21:0.51:104,0,1	0/0:36,0:29:9.62:0,10,701	0/0:42,0:31:17.12:0,17,672	1/1:24,0:17:2.92:83,3,0	0/0:10,0:9:27.09:0,27,404	0/0:18,0:17:50.89:0,51,600	0/0:19,0:19:57.16:0,57,674	0/1:16,0:12:50.90:51,0,139	0/1:15,1:12:24.86:31,0,25	0/0:21,0:19:15.72:0,16,464	0/0:15,0:14:40.92:0,41,465	0/0:13,0:13:36.12:0,36,518	0/1:8,1:8:42.99:51,0,43	0/1:10,0:5:1.95:2,0,12	1/1:9,0:4:8.79:37,9,0	0/1:4,0:4:4.89:5,0,32	1/1:2,0:2:0.47:1,0,0	0/0:21,0:19:43.38:0,43,588	0/1:11,1:10:16.49:59,0,16	1/1:19,1:17:1.67:24,2,0	0/0:18,0:17:48.11:0,48,601	0/1:12,0:9:29.41:51,0,29	0/1:4,0:3:0.08:18,0,0	1/1:3,0:3:5.19:14,5,0
chr10	70350171	.	TC	T	415.79	PASS	AB=0.864;AC=9;AF=0.167;AN=54;BaseQRankSum=5.453;DP=682;FS=11.079;HRun=1;HaplotypeScore=87.6402;InbreedingCoeff=0.4507;MQ=31.96;MQ0=62;MQRankSum=-4.569;QD=6.11;ReadPosRankSum=-0.050;VQSLOD=-0.6212;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:12:24.05:0,24,292	0/0:6,0:5:9.02:0,9,106	0/0:18,0:1:3.01:0,3,42	./.	0/0:21,0:14:14.87:0,15,191	0/0:54,0:43:66.10:0,66,929	0/0:49,0:32:60.16:0,60,812	1/1:15,6:5:9.03:124,9,0	0/0:17,0:14:36.12:0,36,558	0/0:22,0:20:51.46:0,51,608	0/0:21,0:21:44.82:0,45,397	0/0:32,0:24:36.10:0,36,458	0/0:35,0:27:34.47:0,34,419	0/0:34,0:29:44.17:0,44,628	0/0:15,0:13:25.93:0,26,242	0/0:15,0:12:30.10:0,30,459	0/0:23,0:17:23.94:0,24,298	0/0:16,0:6:9.03:0,9,125	1/1:10,0:3:5.92:81,6,0	0/1:2,1:2:31.05:31,0,37	0/0:5,0:4:0:0,0,0	0/0:75,0:63:72.32:0,72,996	0/0:28,0:22:16.41:0,16,190	0/0:65,0:57:51.58:0,52,674	0/0:23,0:20:54.97:0,55,541	0/1:13,3:9:67.35:131,0,67	1/1:6,1:5:5.60:80,6,0	0/1:11,0:10:69.97:107,0,70
chr10	70350179	.	T	TA	1651.24	PASS	AB=0.802;AC=11;AF=0.204;AN=54;BaseQRankSum=1.393;DP=672;FS=22.167;HRun=0;HaplotypeScore=74.9532;InbreedingCoeff=-0.2362;MQ=31.62;MQ0=63;MQRankSum=-7.770;QD=3.64;ReadPosRankSum=-3.744;VQSLOD=0.6174;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,5:14:22.89:23,0,269	0/0:6,0:5:5.67:0,6,62	0/0:8,0:1:3.01:0,3,41	./.	0/0:21,0:13:15.91:0,16,187	0/1:42,13:45:99:172,0,628	0/1:43,12:38:31.14:31,0,679	0/0:22,0:3:3.01:0,3,39	0/0:17,0:14:36.10:0,36,484	0/0:21,0:19:54.04:0,54,611	0/0:21,0:21:62.90:0,63,615	0/1:21,10:23:99:208,0,150	0/1:26,9:26:99:162,0,129	0/1:29,6:29:95.25:95,0,430	0/0:12,0:10:23.15:0,23,202	0/0:15,0:12:30.10:0,30,419	0/1:14,11:19:87.08:258,0,87	0/1:11,6:5:12.32:85,0,12	0/0:7,0:2:5.95:0,6,42	0/0:2,0:1:3.01:0,3,37	0/0:5,0:3:0:0,0,0	0/1:70,7:65:17.67:18,0,826	0/1:29,3:26:71.97:72,0,131	0/1:40,26:59:33.54:665,0,34	0/0:24,0:20:60.09:0,60,741	0/0:15,0:7:17.99:0,18,197	0/0:6,0:4:0.33:0,0,0	0/0:12,0:10:12.50:0,12,103
chr10	70350464	.	C	CCTT	1327.96	PASS	AB=1.000;AC=23;AF=0.426;AN=54;BaseQRankSum=5.383;DP=466;FS=26.538;HRun=0;HaplotypeScore=128.4656;InbreedingCoeff=0.2877;MQ=43.32;MQ0=61;MQRankSum=-5.445;QD=5.27;ReadPosRankSum=2.279;VQSLOD=1.2376;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:11:25.01:0,25,396	1/1:6,0:5:8.95:70,9,0	0/0:28,0:10:12.34:0,12,292	0/0:33,0:15:30.45:0,30,558	0/0:18,0:15:32.89:0,33,515	0/1:18,0:13:20.70:21,0,212	0/1:19,0:17:2.94:3,0,286	1/1:12,0:8:13.91:125,14,0	0/0:10,0:5:5.96:0,6,45	0/0:16,0:12:16.02:0,16,271	0/0:9,0:6:15.91:0,16,183	0/1:14,0:9:7.57:8,0,66	0/1:24,0:17:46.42:46,0,272	0/1:10,0:8:38.25:38,0,80	0/1:7,0:5:4.09:4,0,85	./.	0/1:21,0:15:36.85:37,0,353	0/0:19,0:14:27.85:0,28,345	1/1:5,1:2:6:85,6,0	1/1:15,3:17:44.80:468,45,0	1/1:9,0:2:5.96:46,6,0	0/1:36,0:26:11.17:11,0,104	0/0:30,0:24:8.35:0,8,519	0/1:24,0:16:12.59:13,0,312	0/0:20,0:17:35.45:0,35,477	1/1:14,3:11:24.80:276,25,0	1/1:6,3:8:20.93:259,21,0	0/0:8,0:5:5.99:0,6,51
chr10	70350502	.	G	GT	4179.64	PASS	AC=28;AF=0.519;AN=54;BaseQRankSum=11.974;DP=364;FS=13.028;HRun=2;HaplotypeScore=88.5651;InbreedingCoeff=0.9378;MQ=88.78;MQ0=0;MQRankSum=-5.332;QD=20.39;ReadPosRankSum=2.585;VQSLOD=2.5285;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:16:39.13:550,39,0	1/1:9,0:9:3.46:28,3,0	0/0:27,0:23:56.20:0,56,672	0/0:15,0:15:40.66:0,41,419	1/1:2,18:20:51.17:713,51,0	0/0:13,0:13:39.12:0,39,480	0/0:14,0:14:42.13:0,42,519	1/1:18,0:18:7.12:46,7,0	0/0:6,0:6:15.05:0,15,186	0/0:14,0:14:42.13:0,42,521	0/0:11,0:11:33.10:0,33,409	0/0:4,0:4:12.04:0,12,149	1/1:2,16:18:48.16:673,48,0	0/0:6,0:6:18.06:0,18,223	0/0:12,0:12:36.11:0,36,446	0/0:5,0:5:15.05:0,15,186	1/1:1,12:13:39.13:547,39,0	1/1:14,0:14:21.79:72,22,0	1/1:10,0:10:9.54:41,10,0	1/1:24,0:24:50.70:210,51,0	1/1:7,0:7:13.74:62,14,0	0/0:9,0:9:27.08:0,27,334	1/1:2,14:16:42.05:567,42,0	1/1:0,12:12:36.12:508,36,0	0/0:20,0:19:57.18:0,57,706	1/1:18,0:18:11.28:73,11,0	1/1:9,0:9:19.14:90,19,0	./.
chr10	70350505	.	C	CG	8425.38	PASS	AC=28;AF=0.519;AN=54;BaseQRankSum=5.806;DP=373;FS=5.141;HRun=0;HaplotypeScore=73.1305;InbreedingCoeff=0.9910;MQ=89.38;MQ0=0;MQRankSum=-4.962;QD=39.74;ReadPosRankSum=3.111;VQSLOD=5.5385;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:17:37.03:522,37,0	1/1:0,9:9:27.01:400,27,0	0/0:22,0:22:66.13:0,66,882	0/0:16,0:16:41.94:0,42,517	1/1:20,0:20:51.17:701,51,0	0/0:13,0:13:39.13:0,39,545	0/0:14,0:14:42.14:0,42,586	1/1:3,17:20:51.17:812,51,0	0/0:7,0:7:18.06:0,18,245	0/0:14,0:14:42.14:0,42,588	0/0:12,0:12:33.11:0,33,461	0/0:5,0:5:12.04:0,12,168	1/1:17,0:17:46.40:646,46,0	0/0:6,0:6:18.06:0,18,252	0/0:12,0:12:36.12:0,36,503	0/0:6,0:6:18.05:0,18,235	1/1:13,0:14:39.13:533,39,0	1/1:0,14:14:42.14:670,42,0	1/1:1,9:10:30.09:455,30,0	1/1:0,24:24:72.25:1144,72,0	1/1:0,10:10:21.07:332,21,0	0/0:9,0:9:27.09:0,27,378	1/1:16,0:16:38.51:538,39,0	1/1:12,0:12:36.12:488,36,0	0/0:22,0:21:66.18:0,66,866	1/1:1,16:17:51.16:787,51,0	1/1:2,9:11:27.01:398,27,0	./.
chr10	70351449	.	AAC	A	2079.75	PASS	AB=0.970;AC=24;AF=0.429;AN=56;BaseQRankSum=10.149;DP=435;FS=2.753;HRun=0;HaplotypeScore=79.7811;InbreedingCoeff=0.5097;MQ=68.89;MQ0=5;MQRankSum=-1.784;QD=8.32;ReadPosRankSum=0.873;VQSLOD=3.2528;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:5.13:80,5,0	1/1:6,0:6:15.82:62,16,0	0/0:18,0:8:18.03:0,18,234	0/0:13,0:8:11.35:0,11,89	1/1:29,0:29:45.05:282,45,0	0/0:13,0:13:38.99:0,39,561	0/0:6,0:6:17.96:0,18,186	1/1:21,2:23:28.83:288,29,0	0/0:20,0:20:48.46:0,48,663	0/0:21,0:21:61.84:0,62,686	0/0:16,0:16:45.11:0,45,679	0/0:10,0:10:27.06:0,27,406	1/1:14,0:14:3.75:106,4,0	0/0:12,0:12:31.07:0,31,392	0/0:12,0:12:36.06:0,36,497	0/0:11,0:11:27.05:0,27,330	0/1:18,0:18:27:65,0,27	0/1:11,0:11:45.52:53,0,46	0/1:27,2:27:42.41:265,0,42	1/1:17,1:18:14.55:202,15,0	0/1:5,0:5:4.92:5,0,18	0/0:18,0:18:50.90:0,51,618	1/1:21,0:21:5.55:154,6,0	1/1:9,0:9:13.04:65,13,0	0/0:15,0:15:42.07:0,42,552	0/1:16,1:17:7.57:206,0,8	1/1:21,1:22:9.41:300,9,0	0/1:14,1:15:20.14:145,0,20
chr10	70351450	.	AC	A	4105.38	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=8.000;DP=414;FS=0.000;HRun=2;HaplotypeScore=64.6415;InbreedingCoeff=0.9580;MQ=71.11;MQ0=4;MQRankSum=-3.430;QD=17.47;ReadPosRankSum=-0.567;VQSLOD=3.3439;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:11:22.95:99,23,0	1/1:0,6:6:18.06:230,18,0	0/0:14,0:9:18:0,18,168	0/0:14,0:9:10.05:0,10,63	1/1:10,0:27:66.56:290,67,0	0/0:13,0:13:32.35:0,32,382	0/0:6,0:6:14.03:0,14,119	1/1:3,20:23:59.08:609,59,0	0/0:18,0:18:40.30:0,40,448	0/0:23,0:23:55.90:0,56,496	0/0:15,0:15:45.09:0,45,508	0/0:10,0:10:27.05:0,27,307	1/1:4,0:13:25.66:107,26,0	0/0:11,0:11:23.87:0,24,267	0/0:12,0:12:36.04:0,36,382	0/0:10,0:10:23.99:0,24,234	1/1:0,0:14:20.89:71,21,0	1/1:8,2:11:19.41:171,19,0	1/1:20,8:26:34.39:566,34,0	1/1:3,14:17:41.66:376,42,0	1/1:1,4:5:3.01:38,3,0	0/0:18,0:18:36.82:0,37,416	1/1:4,0:19:41.56:166,42,0	1/1:0,0:9:12.48:51,12,0	0/0:14,0:14:36.06:0,36,389	1/1:9,6:15:35.35:364,35,0	1/1:15,7:22:56.56:586,57,0	1/1:7,8:15:31.04:381,31,0
chr10	70351453	.	AAC	A	631.95	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=11.325;DP=395;FS=4.731;HRun=0;HaplotypeScore=78.6473;InbreedingCoeff=0.8568;MQ=66.25;MQ0=4;MQRankSum=-5.151;QD=6.32;ReadPosRankSum=2.023;VQSLOD=2.7195;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,1:12:3.75:48,4,0	0/0:7,0:7:21.06:0,21,237	0/0:13,0:7:21.06:0,21,341	0/1:9,0:5:3.08:3,0,58	1/1:19,4:23:25.74:282,26,0	0/0:13,0:13:39.13:0,39,775	0/0:6,0:6:18.06:0,18,364	0/0:25,0:25:69.20:0,69,917	0/0:16,0:16:42.14:0,42,835	0/0:22,0:22:60.21:0,60,1195	0/0:14,0:14:42.14:0,42,819	0/0:10,0:10:30.10:0,30,571	1/1:11,0:11:29.60:155,30,0	0/0:10,0:10:30.08:0,30,570	0/0:12,0:12:36.12:0,36,719	0/0:8,0:8:24.08:0,24,488	1/1:16,0:16:17.56:68,18,0	0/0:10,0:10:27.09:0,27,407	0/0:24,0:22:59.77:0,60,787	0/0:18,0:18:51.16:0,51,682	0/0:5,0:5:6.02:0,6,71	0/0:19,0:19:54.19:0,54,1066	1/1:15,4:19:9.36:181,9,0	1/1:8,1:9:12.44:71,12,0	0/0:12,0:12:36.10:0,36,694	0/0:15,0:15:45.14:0,45,641	0/0:23,0:23:56.58:0,57,792	0/0:13,0:13:39.12:0,39,515
chr10	70351454	.	AC	A	1113.84	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=10.770;DP=399;FS=0.000;HRun=2;HaplotypeScore=70.4905;InbreedingCoeff=0.9313;MQ=65.29;MQ0=4;MQRankSum=-6.400;QD=11.60;ReadPosRankSum=1.975;VQSLOD=2.0046;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,5:12:19.30:123,19,0	0/0:7,0:7:19.24:0,19,99	0/0:10,0:6:18.04:0,18,231	0/0:11,0:6:11.82:0,12,89	1/1:14,11:25:63.53:431,64,0	0/0:13,0:13:39.10:0,39,555	0/0:6,0:6:18.06:0,18,269	0/0:26,0:26:62.59:0,63,528	0/0:16,0:16:39.13:0,39,581	0/0:21,0:21:60.20:0,60,896	0/0:14,0:14:39.13:0,39,584	0/0:10,0:10:30.07:0,30,406	1/1:6,5:11:31.55:181,32,0	0/0:11,0:11:30.09:0,30,428	0/0:12,0:12:36.12:0,36,539	0/0:9,0:9:27.08:0,27,386	1/1:7,8:15:31:200,31,0	0/0:10,0:10:25.88:0,26,232	0/0:24,0:22:45.35:0,45,396	0/0:20,0:20:54.45:0,54,384	0/1:5,0:5:0.24:0,0,19	0/0:19,0:19:53.85:0,54,760	1/1:13,6:19:42.81:279,43,0	1/1:6,3:9:14.46:83,14,0	0/0:12,0:12:36.11:0,36,521	0/0:16,0:16:43.83:0,44,372	0/0:22,0:22:57.62:0,58,427	0/0:13,0:13:35.83:0,36,262
chr10	70352223	.	GT	G	8290.60	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.008;DP=678;FS=1.345;HRun=1;HaplotypeScore=65.5995;InbreedingCoeff=0.9995;MQ=76.31;MQ0=0;MQRankSum=-5.424;QD=38.21;ReadPosRankSum=-0.639;VQSLOD=5.0594;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.21:0,63,991	1/1:0,10:10:30.10:420,30,0	0/0:31,0:31:81.32:0,81,1422	0/0:15,0:15:45.15:0,45,708	0/0:28,0:28:84.27:0,84,1317	0/0:38,0:38:99:0,114,1775	0/0:11,0:11:33.11:0,33,528	1/1:0,29:29:87.26:1196,87,0	0/0:17,0:17:48.16:0,48,767	0/0:36,0:36:99:0,108,1726	0/0:24,0:24:72.25:0,72,1151	0/0:22,0:21:63.20:0,63,981	0/0:30,0:30:90.29:0,90,1407	0/0:27,0:27:81.28:0,81,1295	0/0:32,0:32:93.30:0,93,1458	0/0:23,0:23:69.24:0,69,1103	0/0:16,0:15:45.14:0,45,696	0/0:8,0:8:24.08:0,24,383	1/1:0,20:20:60.20:836,60,0	1/1:0,27:25:72.24:1006,72,0	1/1:0,36:36:87.29:1217,87,0	0/0:18,0:18:54.18:0,54,863	0/0:21,0:21:60.19:0,60,935	0/0:16,0:16:48.16:0,48,768	0/0:27,0:27:81.28:0,81,1295	1/1:1,28:29:39.29:1109,39,0	1/1:0,50:50:99:1878,135,0	1/1:0,16:16:45.15:629,45,0
chr10	70352475	.	GA	G	373.13	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.010;DP=488;FS=2.461;HRun=4;HaplotypeScore=45.1276;InbreedingCoeff=0.8459;MQ=50.88;MQ0=27;MQRankSum=-0.207;QD=23.32;ReadPosRankSum=2.524;VQSLOD=2.6309;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:30.06:0,30,397	0/0:4,0:3:9.03:0,9,126	0/0:11,0:3:8.96:0,9,102	0/0:11,0:5:12.04:0,12,151	0/0:28,0:25:57.19:0,57,797	0/0:23,0:23:69.23:0,69,966	0/0:12,0:12:33.11:0,33,462	0/0:15,0:10:30.10:0,30,420	0/0:19,0:19:45.15:0,45,630	0/0:24,0:24:66.22:0,66,911	0/0:26,0:26:72.23:0,72,991	0/0:10,0:10:27.09:0,27,377	0/0:16,0:9:18.06:0,18,251	0/0:17,0:17:48.10:0,48,631	0/0:27,0:27:78.26:0,78,1085	0/0:20,0:20:48.15:0,48,657	0/0:19,0:19:30.10:0,30,420	1/1:0,16:14:39.12:468,39,0	0/0:13,0:9:27.09:0,27,378	0/0:11,0:11:33.07:0,33,439	0/0:11,0:11:27.09:0,27,372	0/0:22,0:22:63.21:0,63,881	0/0:29,0:23:41.99:0,42,587	0/0:9,0:8:15.05:0,15,210	0/0:29,0:29:81.25:0,81,1115	0/0:19,0:17:48.16:0,48,672	0/0:20,0:12:24.08:0,24,332	0/0:9,0:9:24.05:0,24,314
chr10	70352666	.	TCA	T	2354.24	PASS	AB=0.760;AC=20;AF=0.417;AN=48;BaseQRankSum=-5.430;DP=480;FS=3.606;HRun=0;HaplotypeScore=81.3708;InbreedingCoeff=0.4972;MQ=51.01;MQ0=26;MQRankSum=5.067;QD=9.85;ReadPosRankSum=2.416;VQSLOD=3.4095;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:33:4.21:0,4,205	0/0:8,0:8:8.98:0,9,85	0/0:27,0:7:3.01:0,3,41	0/0:42,0:12:3.01:0,3,44	0/0:24,0:25:10.75:0,11,126	0/1:10,12:22:21.63:191,0,22	0/1:11,9:21:15.61:252,0,16	./.	1/1:11,9:19:26.91:282,27,0	0/1:16,8:25:22.90:209,0,23	1/1:6,6:11:9.02:101,9,0	1/1:11,6:16:12.03:134,12,0	0/0:17,0:12:12:0,12,111	1/1:6,13:19:32.93:349,33,0	1/1:10,14:24:32.83:367,33,0	1/1:10,11:21:24.07:268,24,0	0/0:12,0:11:2.64:0,3,20	0/0:17,0:16:15.49:0,15,180	./.	0/0:11,0:7:6.01:0,6,63	0/0:6,0:4:3.01:0,3,41	1/1:2,5:6:9.03:101,9,0	0/0:11,0:13:4.13:0,4,48	0/1:25,0:22:0:0,0,0	1/1:11,9:20:24.07:268,24,0	0/0:9,0:8:15.03:0,15,156	./.	./.
chr10	70353166	.	C	CACACAA	3799.93	PASS	AC=26;AF=0.481;AN=54;BaseQRankSum=9.728;DP=380;FS=27.183;HRun=0;HaplotypeScore=85.2661;InbreedingCoeff=0.9059;MQ=54.64;MQ0=6;MQRankSum=-3.476;QD=25.00;ReadPosRankSum=-4.442;VQSLOD=0.8962;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,1:10:20.85:307,21,0	1/1:5,0:5:5.97:48,6,0	0/0:19,0:10:24.08:0,24,535	0/0:11,0:7:20.97:0,21,346	1/1:15,2:17:29.84:254,30,0	0/0:23,0:23:66.19:0,66,1455	0/0:15,0:15:42.08:0,42,715	1/1:5,0:22:62.98:757,63,0	0/0:14,0:14:42.14:0,42,972	0/0:20,0:20:51.15:0,51,1059	0/0:20,0:20:57.10:0,57,1019	0/0:17,0:17:51.17:0,51,1188	1/1:11,5:14:41.91:619,42,0	0/0:20,0:20:57.17:0,57,1223	0/0:17,0:17:48.11:0,48,954	0/0:17,0:17:48.12:0,48,957	1/1:4,1:5:6.02:138,6,0	0/0:4,0:4:5.90:0,6,37	1/1:12,0:10:29.97:424,30,0	1/1:10,1:6:8.96:151,9,0	1/1:8,0:7:8.90:60,9,0	0/0:11,0:11:30.08:0,30,645	1/1:0,0:5:5.98:98,6,0	1/1:2,6:7:5.98:129,6,0	0/0:16,0:15:42.11:0,42,887	1/1:9,0:12:29.95:447,30,0	1/1:9,0:9:23.98:368,24,0	./.
chr10	70353236	.	AATATATAT	A	4435.62	PASS	AB=0.705;AC=20;AF=0.370;AN=54;BaseQRankSum=9.977;DP=340;FS=48.423;HRun=0;HaplotypeScore=108.9236;InbreedingCoeff=0.4924;MQ=60.58;MQ0=7;MQRankSum=-7.720;QD=23.85;ReadPosRankSum=2.012;VQSLOD=2.2367;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:3,0:17:32.58:33,0,81	1/1:1,12:12:23.95:462,24,0	0/0:15,0:9:6.06:0,6,103	0/1:20,0:9:0.61:1,0,16	0/1:6,0:14:28.54:44,0,29	0/0:16,0:16:42.13:0,42,1695	0/0:10,0:11:21.06:0,21,659	1/1:8,15:22:39.12:809,39,0	0/0:7,0:7:9.01:0,9,281	0/0:15,0:16:45.15:0,45,1690	0/0:14,0:14:36.12:0,36,1430	0/0:4,0:4:12.01:0,12,305	0/1:5,0:12:38.45:56,0,38	0/0:8,0:8:15.02:0,15,407	0/0:14,0:14:33.11:0,33,1252	0/0:11,0:11:30.10:0,30,1124	0/1:3,0:13:26.65:53,0,27	0/0:1,0:10:14.98:0,15,127	1/1:4,12:15:36.06:573,36,0	1/1:2,10:11:20.94:382,21,0	./.	0/0:5,0:5:3:0,3,25	0/1:5,0:6:9.41:9,0,13	0/0:3,0:4:0:0,0,0	0/0:17,0:17:51.18:0,51,1947	1/1:2,15:17:42.11:948,42,0	1/1:3,10:13:27.05:664,27,0	1/1:0,9:9:15.05:402,15,0
chr10	70354757	.	G	GA	6963.11	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=3.446;DP=587;FS=0.000;HRun=10;HaplotypeScore=65.1726;InbreedingCoeff=0.9549;MQ=57.50;MQ0=31;MQRankSum=-0.536;QD=20.07;ReadPosRankSum=1.231;VQSLOD=5.6288;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:33:73.42:768,73,0	1/1:1,8:9:21.05:224,21,0	0/0:17,0:7:17.68:0,18,130	0/0:14,0:6:6.29:0,6,83	1/1:10,16:27:18.14:363,18,0	0/0:10,0:10:29.96:0,30,246	0/0:23,0:23:53.90:0,54,440	1/1:8,23:31:62.79:622,63,0	0/0:13,0:12:32.96:0,33,271	0/0:26,0:25:68.58:0,69,550	0/0:12,0:11:28.04:0,28,207	0/0:21,0:19:44.81:0,45,359	1/1:5,11:15:24.05:248,24,0	0/0:14,0:14:32.95:0,33,271	0/0:21,0:20:56.92:0,57,465	0/0:13,0:14:34.99:0,35,277	1/1:3,33:37:93.07:972,93,0	0/0:13,0:13:20.96:0,21,172	1/1:5,23:27:38.53:581,39,0	1/1:8,22:27:29.50:517,30,0	1/1:2,14:15:33.08:352,33,0	0/0:19,0:18:38.92:0,39,320	1/1:3,12:14:2.34:219,2,0	1/1:11,28:38:66.17:704,66,0	0/0:20,0:19:50.93:0,51,418	1/1:6,23:28:50.22:721,50,0	1/1:3,19:21:45.11:480,45,0	1/1:3,10:12:18.05:192,18,0
chr10	70355270	.	TTG	T	136.90	PASS	AB=1.000;AC=3;AF=0.100;AN=30;BaseQRankSum=2.695;DP=160;FS=0.000;HRun=0;HaplotypeScore=40.0394;InbreedingCoeff=0.5145;MQ=71.95;MQ0=2;MQRankSum=-0.710;QD=5.70;ReadPosRankSum=2.427;VQSLOD=2.2151;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:17,0:8:13.93:0,14,167	0/1:11,0:6:8.57:9,0,44	./.	0/0:10,0:10:29.60:0,30,355	0/0:14,0:14:32.76:0,33,364	./.	0/0:12,0:12:26.95:0,27,357	0/0:14,0:14:23.81:0,24,442	0/0:10,0:10:13.45:0,13,192	0/0:8,0:8:24.02:0,24,275	./.	0/0:8,0:8:21.27:0,21,330	0/0:17,0:17:35.83:0,36,430	0/0:10,0:10:9.06:0,9,255	./.	1/1:1,12:13:14.40:219,14,0	./.	./.	./.	0/0:5,0:5:10.94:0,11,113	./.	./.	0/0:7,0:6:11.98:0,12,162	0/0:2,0:2:6:0,6,53	./.	./.
chr10	70355449	.	G	GCACACA	2279.88	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=4.477;DP=386;FS=1.786;HRun=0;HaplotypeScore=91.1457;InbreedingCoeff=0.7988;MQ=50.87;MQ0=16;MQRankSum=-4.047;QD=12.26;ReadPosRankSum=-3.566;VQSLOD=1.6543;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:23:15.05:270,15,0	0/0:8,0:7:0.89:0,1,2	0/0:43,0:12:20.76:0,21,372	0/0:27,0:19:17.99:0,18,330	1/1:6,2:15:21:497,21,0	0/0:13,0:14:36.12:0,36,738	0/0:9,0:11:15.73:0,16,311	1/1:17,0:17:11.93:109,12,0	0/0:10,0:10:24.08:0,24,490	0/0:16,0:16:39.11:0,39,726	0/0:7,0:10:27.09:0,27,527	0/0:8,0:10:21.07:0,21,397	1/1:3,4:13:27.09:667,27,0	0/0:8,0:8:18.06:0,18,364	0/0:11,0:11:24.08:0,24,506	0/0:7,0:7:15.05:0,15,303	1/1:8,4:16:9.03:214,9,0	1/1:10,0:10:9.50:116,9,0	1/1:9,0:8:5.97:56,6,0	1/1:7,0:17:6.02:118,6,0	1/1:19,0:18:11.40:136,11,0	0/0:7,0:8:18.06:0,18,358	1/1:4,3:10:5.79:137,6,0	1/1:4,0:9:5.28:76,5,0	0/0:15,0:15:36.11:0,36,636	0/1:16,0:13:1.75:2,0,56	1/1:7,0:7:4.77:60,5,0	1/1:3,0:3:4.23:26,4,0
chr10	70355549	.	GTA	G	1198.45	PASS	AB=1.000;AC=21;AF=0.477;AN=44;BaseQRankSum=5.008;DP=232;FS=0.000;HRun=0;HaplotypeScore=57.2113;InbreedingCoeff=0.5589;MQ=38.19;MQ0=31;MQRankSum=-1.369;QD=10.33;ReadPosRankSum=0.717;VQSLOD=3.0752;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:5.95:44,6,0	0/0:5,0:5:3.68:0,4,15	./.	./.	1/1:11,0:11:5.94:43,6,0	0/0:12,0:8:9.03:0,9,149	0/0:6,0:5:12.04:0,12,199	1/1:7,7:11:12.04:147,12,0	0/0:7,0:6:3.01:0,3,50	0/0:13,0:10:21.07:0,21,327	0/0:8,0:6:3:0,3,25	0/0:4,0:3:6.01:0,6,75	1/1:4,0:4:6.01:59,6,0	./.	0/0:6,0:5:3.01:0,3,50	0/0:5,0:4:3.01:0,3,50	0/1:9,0:9:8.73:14,0,9	0/0:9,0:6:5.96:0,6,44	1/1:4,2:6:6.02:73,6,0	1/1:1,17:18:30.10:378,30,0	1/1:2,5:7:3.01:38,3,0	./.	./.	./.	0/0:7,0:4:6.01:0,6,76	1/1:4,12:16:30.09:370,30,0	1/1:4,3:7:3.01:38,3,0	1/1:1,8:9:12.04:151,12,0
chr10	70355577	.	ATGTG	A	519.67	PASS	AB=1.000;AC=11;AF=0.367;AN=30;BaseQRankSum=3.932;DP=208;FS=1.941;HRun=0;HaplotypeScore=50.1675;InbreedingCoeff=0.5229;MQ=27.57;MQ0=90;MQRankSum=-1.194;QD=10.19;ReadPosRankSum=-2.651;VQSLOD=1.8220;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,2:8:0:0,0,0	./.	./.	./.	./.	0/0:12,1:6:6.02:0,6,143	0/0:17,0:7:3.01:0,3,68	1/1:3,4:4:9.03:153,9,0	./.	0/0:11,0:4:6.02:0,6,150	./.	0/0:3,0:2:3.01:0,3,75	./.	./.	0/1:10,0:7:0.03:0,0,0	0/0:5,0:3:3.01:0,3,75	./.	0/0:7,0:4:0:0,0,0	1/1:3,2:4:6.02:98,6,0	1/1:9,6:15:11.94:116,12,0	./.	./.	0/0:4,2:6:0:0,0,0	./.	0/0:4,0:1:3.01:0,3,75	1/1:7,2:8:11.97:144,12,0	./.	1/1:4,1:5:11.95:118,12,0
chr10	70355607	.	TCAGAGA	T	211.57	PASS	AB=0.861;AC=6;AF=0.200;AN=30;BaseQRankSum=1.395;DP=238;FS=0.000;HRun=0;HaplotypeScore=35.1901;InbreedingCoeff=0.1083;MQ=17.12;MQ0=165;MQRankSum=-1.733;QD=4.50;ReadPosRankSum=1.986;VQSLOD=0.4067;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:4:0:0,0,0	./.	./.	./.	0/0:6,0:4:0:0,0,0	0/0:14,0:6:2.96:0,3,19	0/1:16,0:4:0:0,0,0	0/0:8,0:3:6.85:0,7,48	./.	0/1:12,0:4:8.15:8,0,121	./.	./.	0/0:5,0:2:0:0,0,0	./.	0/0:7,0:5:0:0,0,0	0/0:7,0:4:3.01:0,3,39	0/1:1,2:3:13.98:65,0,14	./.	0/1:10,1:4:32.96:89,0,33	0/0:8,0:6:2.94:0,3,19	./.	./.	0/0:4,1:4:0:0,0,0	./.	./.	1/1:3,1:3:9:137,9,0	./.	0/0:1,0:1:2.97:0,3,20
chr10	70355608	.	CAGAGAG	C	291.16	PASS	AB=0.915;AC=10;AF=0.385;AN=26;BaseQRankSum=1.599;DP=238;FS=0.000;HRun=0;HaplotypeScore=33.1676;InbreedingCoeff=0.4167;MQ=17.01;MQ0=166;MQRankSum=-0.825;QD=5.71;ReadPosRankSum=1.932;VQSLOD=0.4263;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,1:4:0:0,0,0	./.	./.	./.	0/0:5,0:4:0:0,0,0	./.	0/1:15,0:4:0:0,0,0	1/1:8,0:3:2.97:20,3,0	./.	0/0:13,0:4:8.62:0,9,170	./.	./.	0/0:3,2:2:0:0,0,0	./.	0/0:8,0:5:0:0,0,0	0/0:7,0:4:3.01:0,3,57	1/1:3,0:3:3.01:58,3,0	./.	1/1:10,0:4:6.02:102,6,0	0/1:7,0:6:0.02:0,0,0	./.	./.	0/0:5,1:4:0:0,0,0	./.	./.	1/1:3,1:4:12.04:194,12,0	./.	./.
chr10	70357901	.	CAGAT	C	4512.70	PASS	AB=0.950;AC=41;AF=0.854;AN=48;BaseQRankSum=5.737;DP=590;FS=9.860;HRun=0;HaplotypeScore=111.8422;InbreedingCoeff=0.4634;MQ=70.11;MQ0=13;MQRankSum=-0.642;QD=9.68;ReadPosRankSum=0.371;VQSLOD=3.5487;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,13:35:20.72:317,21,0	1/1:3,0:10:9.97:29,10,0	./.	./.	1/1:14,13:28:23.43:362,23,0	0/1:20,1:21:18.29:18,0,528	./.	./.	1/1:14,15:29:30.10:454,30,0	1/1:17,10:27:30.10:443,30,0	1/1:8,13:22:35.92:509,36,0	1/1:10,0:19:21.02:192,21,0	0/0:19,0:27:27.09:0,27,497	1/1:8,0:19:24.01:215,24,0	1/1:10,8:17:12.04:182,12,0	1/1:10,0:16:10.83:87,11,0	1/1:14,8:21:9.03:136,9,0	1/1:10,6:15:6.02:91,6,0	1/1:11,0:13:9.02:115,9,0	1/1:22,11:31:15.17:227,15,0	1/1:16,1:18:3.48:46,3,0	1/1:7,0:10:9:80,9,0	0/1:19,1:20:9.26:9,0,654	1/1:7,5:11:12.04:182,12,0	1/1:4,9:13:21.07:318,21,0	0/1:32,2:33:0.23:0,0,884	1/1:14,15:28:33.11:499,33,0	0/0:7,0:9:6.02:0,6,104
chr10	70358338	.	A	AAAAAG	1308.77	PASS	AB=1.000;AC=20;AF=0.400;AN=50;BaseQRankSum=7.035;DP=323;FS=21.609;HRun=0;HaplotypeScore=73.0972;InbreedingCoeff=0.5081;MQ=65.55;MQ0=11;MQRankSum=-5.159;QD=10.55;ReadPosRankSum=-3.126;VQSLOD=-0.2845;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,5:6:5.50:89,6,0	0/0:20,0:5:2.07:0,2,32	0/1:33,0:16:12.76:13,0,60	1/1:14,0:14:7.27:166,7,0	0/0:21,0:21:54.18:0,54,933	0/0:6,0:5:15.02:0,15,179	1/1:11,0:5:8.99:78,9,0	0/0:19,0:19:36.05:0,36,531	0/0:20,0:19:44.51:0,45,717	0/0:22,0:22:51.08:0,51,831	0/0:17,0:17:38.96:0,39,647	0/0:4,0:2:4.04:0,4,12	0/0:18,0:17:35.56:0,36,544	0/0:5,0:5:15.04:0,15,245	0/0:21,0:21:51.14:0,51,748	./.	0/1:6,0:6:13.66:73,0,14	1/1:5,0:3:6:55,6,0	1/1:4,10:16:21.05:536,21,0	1/1:6,0:6:5.98:52,6,0	0/0:9,0:9:15.04:0,15,244	0/1:7,0:6:29.88:30,0,43	./.	0/0:16,0:16:37:0,37,624	0/1:5,0:5:32.82:33,0,69	1/1:1,9:8:9.02:250,9,0	1/1:0,4:5:6.02:110,6,0
chr10	70358364	.	C	CTGGACAT	1581.75	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=2.152;DP=423;FS=32.601;HRun=0;HaplotypeScore=105.3627;InbreedingCoeff=0.8877;MQ=67.83;MQ0=11;MQRankSum=-5.960;QD=49.43;ReadPosRankSum=-0.379;VQSLOD=1.5985;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:1:3.01:110,3,0	0/0:13,0:13:14.71:0,15,339	0/0:31,0:13:26.70:0,27,523	0/0:36,0:21:38.38:0,38,802	1/1:9,6:14:18.06:642,18,0	0/0:17,0:17:51.16:0,51,1167	0/0:9,0:8:18.06:0,18,446	0/0:14,0:10:27.09:0,27,660	0/0:19,0:19:45.14:0,45,994	0/0:33,0:31:81.20:0,81,1865	0/0:21,0:20:51.18:0,51,1216	0/0:15,0:14:42.13:0,42,914	1/1:3,4:5:12.04:390,12,0	0/0:19,0:18:48.13:0,48,1088	0/0:11,0:11:33.11:0,33,740	0/0:19,0:19:54.19:0,54,1289	1/1:1,0:1:2.97:20,3,0	0/0:10,0:10:21.07:0,21,481	0/0:11,0:8:21.07:0,21,468	0/0:19,0:19:44.58:0,45,814	0/0:12,0:9:18.06:0,18,421	0/0:7,0:7:21.04:0,21,421	1/1:3,5:7:15.05:572,15,0	./.	0/0:24,0:24:60.21:0,60,1382	0/0:16,0:15:42.14:0,42,1028	0/0:19,0:17:36.45:0,36,663	0/0:12,0:11:27.09:0,27,632
chr10	70359465	.	AG	A	3873.92	PASS	AB=0.824;AC=40;AF=0.714;AN=56;BaseQRankSum=2.142;DP=330;FS=8.373;HRun=1;HaplotypeScore=99.0061;InbreedingCoeff=0.1014;MQ=51.75;MQ0=4;MQRankSum=-0.388;QD=12.91;ReadPosRankSum=4.737;VQSLOD=2.2206;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,3:14:34.16:190,34,0	0/1:2,4:6:23.28:23,0,44	0/0:7,0:4:12.04:0,12,158	0/0:11,0:8:17.89:0,18,252	1/1:10,2:11:21.36:123,21,0	0/1:23,0:22:99:121,0,382	0/1:11,0:11:11.72:136,0,12	1/1:1,10:11:21.99:84,22,0	1/1:12,7:19:51.16:401,51,0	1/1:11,13:24:70.61:666,71,0	0/1:14,7:21:38.21:304,0,38	0/1:10,0:10:14.47:14,0,272	1/1:7,0:7:14.10:83,14,0	1/1:8,7:15:38.46:342,38,0	1/1:6,6:12:34.28:260,34,0	1/1:10,7:16:40.75:332,41,0	1/1:5,1:6:13.54:97,14,0	1/1:11,2:13:36.08:226,36,0	0/1:10,5:14:58.43:58,0,148	0/0:10,2:9:12.35:0,12,187	0/1:3,2:5:11.84:12,0,20	0/1:16,0:16:94.81:95,0,266	1/1:6,0:5:2.01:23,2,0	1/1:11,0:11:16.71:121,17,0	1/1:7,0:7:20.31:132,20,0	0/1:6,4:9:10.29:10,0,115	0/1:3,2:4:12.83:13,0,24	1/1:3,1:3:1.87:7,2,0
chr10	70359467	.	ACCC	A	6253.60	PASS	AB=0.917;AC=49;AF=0.875;AN=56;BaseQRankSum=-0.700;DP=316;FS=9.898;HRun=4;HaplotypeScore=102.9605;InbreedingCoeff=0.3899;MQ=56.57;MQ0=3;MQRankSum=-2.379;QD=21.13;ReadPosRankSum=3.917;VQSLOD=1.0902;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,3:16:44.30:350,44,0	1/1:1,4:5:0.25:48,0,0	0/0:7,0:4:11.91:0,12,157	0/0:13,0:10:26.66:0,27,347	1/1:11,2:12:26.67:228,27,0	0/1:21,0:21:4.55:262,0,5	1/1:10,0:10:12.21:207,12,0	1/1:0,10:10:26.75:185,27,0	1/1:13,6:19:56.70:569,57,0	1/1:14,9:23:65.97:781,66,0	1/1:14,7:21:38.25:493,38,0	0/1:10,0:10:26.14:50,0,26	1/1:7,0:7:14.97:145,15,0	1/1:8,7:15:44.76:494,45,0	1/1:6,6:12:35.84:373,36,0	1/1:12,5:16:41.83:434,42,0	1/1:4,1:5:14.85:140,15,0	1/1:11,2:13:38.83:358,39,0	1/1:4,5:8:20.90:160,21,0	0/1:6,2:8:10.77:35,0,11	1/1:3,2:5:10.80:57,11,0	1/1:14,0:15:4.30:200,4,0	1/1:7,0:6:8.18:50,8,0	1/1:11,0:11:20.25:175,20,0	1/1:8,0:8:24.01:243,24,0	1/1:3,4:7:19.07:103,19,0	1/1:3,2:5:11.80:94,12,0	1/1:2,1:2:2.96:19,3,0
chr10	70359608	.	G	GT	6843.56	PASS	AB=0.830;AC=53;AF=0.946;AN=56;BaseQRankSum=-3.842;DP=210;FS=53.995;HRun=0;HaplotypeScore=66.4053;InbreedingCoeff=0.1000;MQ=65.44;MQ0=0;MQRankSum=-3.535;QD=32.59;ReadPosRankSum=2.905;VQSLOD=1.2058;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,7:10:12.04:180,12,0	1/1:0,2:2:3.01:48,3,0	0/1:4,0:4:0.37:0,0,71	0/1:6,0:7:33.11:33,0,40	1/1:1,7:7:12.04:177,12,0	1/1:0,15:15:42.13:645,42,0	1/1:2,8:12:29.60:421,30,0	1/1:1,7:8:24.08:381,24,0	1/1:0,12:13:33.10:503,33,0	1/1:1,7:8:21.07:323,21,0	1/1:0,5:5:9.03:143,9,0	1/1:2,11:13:30.10:478,30,0	1/1:0,7:7:21.07:334,21,0	1/1:0,10:10:27.09:429,27,0	1/1:2,10:12:27.09:392,27,0	1/1:0,14:13:30.10:465,30,0	1/1:0,4:4:9.03:143,9,0	1/1:0,1:2:6:72,6,0	1/1:2,1:3:6.82:67,7,0	1/1:0,8:7:21.07:335,21,0	1/1:0,9:9:21.07:314,21,0	1/1:1,3:4:6.02:96,6,0	1/1:1,7:9:21.05:310,21,0	0/1:3,5:8:5.29:77,0,5	1/1:1,3:4:9.03:143,9,0	1/1:2,3:5:9.03:143,9,0	1/1:0,3:3:9.03:143,9,0	1/1:0,1:1:3.01:48,3,0
chr10	70360964	.	CGGT	C	7903.29	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=16.960;DP=687;FS=3.394;HRun=0;HaplotypeScore=117.9717;InbreedingCoeff=0.9998;MQ=79.32;MQ0=0;MQRankSum=-6.729;QD=43.66;ReadPosRankSum=3.937;VQSLOD=6.5984;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:40:99:1852,105,0	0/0:14,0:14:42.14:0,42,964	0/0:19,0:19:55.74:0,56,1225	0/0:27,0:28:77.75:0,78,1739	1/1:2,17:19:39.09:655,39,0	0/0:16,0:16:48.16:0,48,1064	0/0:17,0:17:51.17:0,51,1149	0/0:30,0:30:87.30:0,87,2000	0/0:35,0:35:99:0,105,2410	0/0:30,0:30:90.31:0,90,2126	0/0:12,0:12:36.11:0,36,806	0/0:17,0:17:51.18:0,51,1193	1/1:0,31:31:87.30:1534,87,0	0/0:24,0:24:72.25:0,72,1701	0/0:34,0:34:99:0,99,2272	0/0:24,0:24:72.25:0,72,1701	1/1:0,28:28:63.22:1111,63,0	1/1:1,16:17:39.13:688,39,0	0/0:14,0:14:42.14:0,42,951	0/0:16,0:16:48.16:0,48,1128	0/0:56,0:56:99:0,169,3946	0/0:19,0:19:54.16:0,54,1158	1/1:0,21:21:57.19:1005,57,0	1/1:0,25:25:60.21:1058,60,0	0/0:21,0:21:60.19:0,60,1331	0/0:33,0:33:96.33:0,96,2271	0/0:38,0:38:99:0,111,2574	0/0:9,0:9:27.09:0,27,612
chr10	70362047	.	T	TG	9294.60	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=19.898;DP=711;FS=5.538;HRun=0;HaplotypeScore=93.4555;InbreedingCoeff=0.9999;MQ=63.81;MQ0=2;MQRankSum=-0.724;QD=41.31;ReadPosRankSum=4.338;VQSLOD=5.2506;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,46:47:99:1973,132,0	1/1:0,12:12:36.12:541,36,0	0/0:22,0:17:48.14:0,48,648	0/0:25,0:21:60.06:0,60,740	1/1:0,26:26:75.12:1072,75,0	0/0:27,0:27:81.25:0,81,1102	0/0:28,0:28:81.26:0,81,1117	0/0:25,0:25:72.24:0,72,1006	0/0:29,0:29:87.29:0,87,1216	0/0:27,0:27:81.27:0,81,1132	0/0:21,0:21:63.21:0,63,880	0/0:16,0:16:48.15:0,48,655	1/1:0,31:31:90.30:1352,90,0	0/0:22,0:22:66.18:0,66,856	0/0:21,0:21:63.19:0,63,848	0/0:22,0:22:66.19:0,66,873	1/1:1,24:25:72.24:1064,72,0	1/1:0,26:26:72.24:1079,72,0	0/0:22,0:22:66.22:0,66,922	0/0:32,0:32:96.32:0,96,1342	0/0:30,0:30:90.29:0,90,1242	0/0:27,0:27:78.24:0,78,1056	1/1:0,23:23:53.93:780,54,0	1/1:0,35:35:96.33:1434,96,0	0/0:33,0:33:99:0,99,1350	0/0:24,0:24:69.23:0,69,965	0/0:22,0:22:66.22:0,66,921	0/0:11,0:11:33.09:0,33,428
chr10	70362868	.	G	GC	163.94	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.597;DP=557;FS=11.292;HRun=9;HaplotypeScore=83.1840;InbreedingCoeff=0.6507;MQ=80.76;MQ0=0;MQRankSum=-1.889;QD=11.71;ReadPosRankSum=0.974;VQSLOD=1.8735;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:92.85:0,93,786	0/0:11,0:12:26.02:0,26,214	0/0:11,0:11:20.95:0,21,178	0/0:22,0:22:17.94:0,18,151	0/0:22,0:22:59.86:0,60,506	0/0:22,1:23:28.84:0,29,467	0/0:25,0:25:59.98:0,60,521	0/0:24,0:23:30.93:0,31,311	0/0:20,0:20:56.98:0,57,492	0/0:19,0:19:47.93:0,48,405	0/0:23,0:23:65.97:0,66,569	0/0:5,0:5:14.97:0,15,123	0/0:20,0:20:53.98:0,54,469	0/0:15,1:16:14.81:0,15,357	0/0:19,0:19:50.97:0,51,439	0/0:21,0:21:56.98:0,57,495	0/0:32,0:32:80.95:0,81,699	1/1:5,9:14:1.02:239,1,0	0/0:19,1:21:20.56:0,21,381	0/0:22,0:22:60.36:0,60,504	0/0:24,0:24:59.95:0,60,516	0/0:16,0:16:38.89:0,39,321	0/0:19,0:19:44.98:0,45,389	0/0:20,0:20:47.91:0,48,404	0/0:17,0:17:41.95:0,42,359	0/0:22,0:22:56.97:0,57,490	0/0:24,0:24:65.93:0,66,561	0/0:6,0:6:14.99:0,15,130
chr10	70369868	.	C	CT	306.62	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.410;DP=538;FS=12.084;HRun=8;HaplotypeScore=78.6339;InbreedingCoeff=0.9884;MQ=71.29;MQ0=0;MQRankSum=-2.453;QD=23.59;ReadPosRankSum=0.188;VQSLOD=3.4177;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,2:47:85.30:0,85,1021	1/1:2,11:13:36.07:401,36,0	0/0:18,0:17:32.96:0,33,289	0/0:20,0:19:24.46:0,24,290	0/0:20,0:21:52.96:0,53,456	0/0:9,0:9:21:0,21,190	0/0:17,0:17:45:0,45,407	0/0:24,0:24:60.01:0,60,543	0/0:20,0:20:42.01:0,42,384	0/0:20,0:20:54:0,54,485	0/0:17,0:17:36.01:0,36,329	0/0:15,0:15:41.96:0,42,370	0/0:19,0:19:54.03:0,54,494	0/0:22,0:22:51.01:0,51,465	0/0:11,0:11:30:0,30,270	0/0:13,0:13:36.02:0,36,329	0/0:22,0:22:60.01:0,60,544	0/0:18,0:18:36.01:0,36,329	0/0:21,0:21:53.97:0,54,485	0/0:24,0:24:69:0,69,621	0/0:16,0:16:42.02:0,42,384	0/0:15,0:15:36.10:0,36,352	0/0:27,0:27:65.07:0,65,602	0/0:18,0:18:48.03:0,48,439	0/0:13,0:13:36.02:0,36,329	0/0:22,0:23:44.05:0,44,390	0/0:24,0:24:68.97:0,69,617	0/0:11,0:11:21.01:0,21,192
chr10	70372224	.	AT	A	126.36	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.862;DP=632;FS=1.091;HRun=9;HaplotypeScore=72.8216;InbreedingCoeff=0.9765;MQ=70.78;MQ0=1;MQRankSum=-0.324;QD=12.64;ReadPosRankSum=0.415;VQSLOD=3.3315;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.17:0,57,658	1/1:1,9:10:24.01:220,24,0	0/0:25,0:19:43.79:0,44,433	0/0:15,0:13:16.57:0,17,202	0/0:37,1:38:68.83:0,69,1037	0/0:28,0:28:78.23:0,78,900	0/0:13,0:13:36.09:0,36,402	0/0:33,0:33:69.17:0,69,764	0/0:15,1:16:17.65:0,18,448	0/0:20,0:20:48.14:0,48,554	0/0:24,0:24:66.17:0,66,742	0/0:10,0:10:30.07:0,30,328	0/0:22,0:22:60.16:0,60,680	0/0:16,0:16:42.11:0,42,475	0/0:18,0:18:51.15:0,51,588	0/0:27,1:29:53.76:0,54,864	0/0:24,0:24:60.16:0,60,681	0/0:11,1:12:27.05:0,27,298	0/0:20,0:21:47.97:0,48,534	0/0:30,0:30:84.25:0,84,969	0/0:12,0:12:36.11:0,36,415	0/0:31,0:31:87.24:0,87,993	0/0:25,0:25:72.18:0,72,802	0/0:14,0:14:39.12:0,39,450	0/0:20,0:20:57.17:0,57,658	0/0:42,0:42:99:0,105,1210	0/0:48,1:48:99:0,102,1399	0/0:13,0:14:38.95:0,39,430
chr10	70373016	.	G	GT	6420.64	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-11.946;DP=401;FS=9.805;HRun=8;HaplotypeScore=36.0105;InbreedingCoeff=0.9755;MQ=76.88;MQ0=0;MQRankSum=-0.861;QD=29.05;ReadPosRankSum=1.710;VQSLOD=4.4973;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:33.10:381,33,0	1/1:1,3:4:9.03:104,9,0	0/0:17,0:17:13.76:0,14,252	0/0:7,0:7:14.96:0,15,135	1/1:2,23:25:66.19:753,66,0	0/0:11,0:11:33.02:0,33,302	0/0:18,0:18:44.97:0,45,397	1/1:6,24:30:69.19:785,69,0	0/0:8,0:8:24.01:0,24,220	0/0:11,0:11:24:0,24,218	0/0:24,0:24:66.02:0,66,597	0/0:6,0:6:18.01:0,18,165	1/1:0,8:9:20.89:222,21,0	0/0:8,0:8:18.01:0,18,165	0/0:13,0:13:33:0,33,299	0/0:15,0:15:42.02:0,42,382	1/1:2,16:18:39.12:450,39,0	1/1:1,7:8:21.06:242,21,0	1/1:1,7:8:21.06:242,21,0	1/1:3,26:29:72.21:830,72,0	1/1:1,9:10:27.08:312,27,0	0/0:24,0:24:69.01:0,69,622	1/1:1,9:10:24.07:277,24,0	1/1:0,4:4:12.04:138,12,0	0/0:18,0:18:48.01:0,48,434	1/1:3,22:26:44.61:749,45,0	1/1:2,22:24:66.20:761,66,0	1/1:0,5:5:15.04:173,15,0
chr10	70375071	.	G	GGA	11537.74	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-10.840;DP=580;FS=2.915;HRun=0;HaplotypeScore=82.3327;InbreedingCoeff=0.9697;MQ=74.91;MQ0=0;MQRankSum=-0.648;QD=32.78;ReadPosRankSum=6.757;VQSLOD=6.4703;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,46:50:99:1807,108,0	1/1:2,1:10:11.93:100,12,0	0/0:19,0:18:38.99:0,39,388	0/0:16,0:15:37.48:0,37,413	1/1:0,11:12:26.96:377,27,0	0/0:9,0:9:26.96:0,27,256	0/0:25,0:25:63.12:0,63,746	1/1:3,27:33:89.70:1107,90,0	0/0:16,0:16:45.06:0,45,503	0/0:24,0:24:57.56:0,58,614	0/0:9,0:9:24.02:0,24,254	0/0:16,0:16:47.79:0,48,524	1/1:3,2:27:16.53:326,17,0	0/0:22,0:22:57.95:0,58,624	0/0:20,0:20:57.08:0,57,630	0/0:16,0:16:45.10:0,45,568	1/1:2,28:30:78.24:1317,78,0	1/1:5,0:5:9.78:61,10,0	1/1:2,17:21:60.16:924,60,0	1/1:3,25:28:69.13:1089,69,0	1/1:0,30:30:60.21:1007,60,0	0/0:18,0:18:48.02:0,48,519	1/1:3,1:16:28.60:291,29,0	1/1:2,1:21:5.11:254,5,0	0/0:18,0:18:44.43:0,44,487	1/1:1,21:22:63.14:931,63,0	1/1:2,20:23:60.20:994,60,0	1/1:0,24:24:57.19:952,57,0
chr10	70376044	.	TG	T	3669.64	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=10.154;DP=313;FS=9.671;HRun=2;HaplotypeScore=65.2737;InbreedingCoeff=0.9411;MQ=93.27;MQ0=5;MQRankSum=-8.101;QD=28.01;ReadPosRankSum=1.014;VQSLOD=2.2755;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:45.13:557,45,0	1/1:1,3:4:9.03:111,9,0	0/0:40,0:25:49.10:0,49,716	0/0:47,0:29:38.52:0,39,743	1/1:2,11:13:15.03:174,15,0	0/0:8,0:8:24.08:0,24,360	0/0:12,0:12:36.12:0,36,540	1/1:0,13:13:39.12:483,39,0	0/0:5,0:5:15.05:0,15,224	0/0:7,0:7:21.07:0,21,305	0/0:4,0:4:12.04:0,12,180	0/0:4,0:4:12.04:0,12,178	1/1:1,7:8:21.07:261,21,0	0/0:11,0:11:33.11:0,33,495	0/0:13,0:13:39.13:0,39,584	0/0:5,0:5:15.05:0,15,225	1/1:0,11:10:21.07:260,21,0	1/1:0,9:9:27.08:335,27,0	1/1:0,5:5:15.01:158,15,0	1/1:0,4:4:9.03:112,9,0	1/1:0,9:9:15:167,15,0	0/0:5,0:5:15.05:0,15,224	1/1:0,5:5:15.05:180,15,0	1/1:1,8:9:5.82:57,6,0	0/0:18,0:18:54.16:0,54,788	1/1:0,10:10:30.09:371,30,0	1/1:1,6:7:18.06:223,18,0	1/1:0,6:6:18.06:222,18,0
chr10	70376066	.	CCT	C	1062.20	PASS	AB=0.757;AC=23;AF=0.442;AN=52;BaseQRankSum=6.779;DP=416;FS=19.450;HRun=0;HaplotypeScore=70.4492;InbreedingCoeff=0.6460;MQ=56.10;MQ0=43;MQRankSum=-6.520;QD=9.57;ReadPosRankSum=-1.851;VQSLOD=1.4520;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,3:19:12.42:88,12,0	1/1:0,3:3:8.38:71,8,0	0/0:97,0:18:32.17:0,32,342	0/0:107,1:26:27.15:0,27,498	./.	0/0:8,0:8:12.04:0,12,213	0/0:14,0:14:36.12:0,36,639	0/1:11,7:15:28.97:228,0,29	0/0:7,0:7:12.04:0,12,213	0/0:5,0:4:12.04:0,12,213	0/0:3,0:3:9.03:0,9,159	0/0:2,0:2:6.02:0,6,106	1/1:3,4:7:17.89:165,18,0	0/0:9,0:9:24.08:0,24,404	0/0:11,0:10:24.08:0,24,422	0/0:4,0:3:9.03:0,9,160	1/1:6,2:8:6.48:67,6,0	1/1:4,4:8:10.75:163,11,0	1/1:4,3:6:9.02:104,9,0	1/1:2,2:4:3.01:35,3,0	./.	0/0:5,0:4:9.03:0,9,159	1/1:3,1:4:5.99:50,6,0	0/1:8,4:11:27.13:27,0,31	0/0:11,0:11:30.10:0,30,514	1/1:6,4:8:14.61:143,15,0	0/1:2,1:4:1.21:36,0,1	1/1:1,3:4:8.96:74,9,0
chr10	70376068	.	T	TCTC	1689.79	PASS	AB=0.939;AC=24;AF=0.462;AN=52;BaseQRankSum=6.951;DP=419;FS=27.853;HRun=0;HaplotypeScore=70.8175;InbreedingCoeff=0.6777;MQ=50.51;MQ0=47;MQRankSum=-7.116;QD=15.50;ReadPosRankSum=-3.137;VQSLOD=1.2712;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,2:16:18.67:169,19,0	1/1:3,0:3:8.92:88,9,0	0/0:98,0:17:33.04:0,33,374	0/0:111,0:24:36.85:0,37,448	./.	0/0:8,0:8:12.04:0,12,200	0/0:15,0:14:36.59:0,37,592	0/1:18,1:16:25.91:403,0,26	0/0:6,0:6:12.04:0,12,200	0/0:5,0:4:12.04:0,12,198	0/0:3,0:3:9.03:0,9,150	0/0:2,0:2:6.02:0,6,100	1/1:5,1:7:18.06:260,18,0	0/0:9,0:9:24.08:0,24,396	0/0:12,0:10:24.08:0,24,398	0/0:4,0:3:9.03:0,9,150	1/1:9,0:9:6.49:79,6,0	1/1:7,1:8:17.07:229,17,0	1/1:8,1:6:12.04:161,12,0	1/1:3,1:4:3.01:35,3,0	./.	0/0:5,0:4:9.03:0,9,150	1/1:3,0:3:6.02:96,6,0	0/1:12,1:11:27.02:27,0,28	0/0:11,0:11:30.10:0,30,491	1/1:9,0:7:20.35:205,20,0	1/1:2,0:2:2.25:40,2,0	1/1:4,0:4:9:92,9,0
chr10	70376075	.	TCTC	T	645.07	PASS	AB=0.843;AC=18;AF=0.346;AN=52;BaseQRankSum=6.640;DP=430;FS=1.108;HRun=0;HaplotypeScore=60.0072;InbreedingCoeff=0.4339;MQ=39.79;MQ0=55;MQRankSum=-5.054;QD=7.50;ReadPosRankSum=-1.692;VQSLOD=2.2931;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,2:15:37.71:110,0,38	1/1:3,0:3:5.04:37,5,0	0/0:109,0:13:8.26:0,8,272	0/0:121,0:23:14.98:0,15,416	./.	0/0:7,0:7:12.04:0,12,262	0/0:17,0:15:24.08:0,24,522	0/1:10,4:11:67.51:130,0,68	0/0:6,0:6:12.04:0,12,236	0/0:5,0:4:12.04:0,12,237	0/0:4,0:4:12.04:0,12,260	0/0:2,0:2:6.02:0,6,130	1/1:9,1:7:14.51:124,15,0	0/0:9,0:9:24.08:0,24,490	0/0:11,0:8:24.08:0,24,471	0/0:5,0:3:9.03:0,9,197	1/1:4,1:5:3.01:30,3,0	1/1:4,3:7:12.88:145,13,0	1/1:10,1:6:7.55:67,8,0	./.	0/0:10,1:9:0.89:0,1,2	0/0:4,0:3:9.03:0,9,197	0/1:3,1:4:27.50:40,0,27	0/0:11,1:9:2.84:0,3,14	0/0:10,0:10:21.07:0,21,410	0/1:7,1:5:28.26:42,0,28	1/1:2,0:2:1.55:4,2,0	1/1:0,3:3:8.89:81,9,0
chr10	70376078	.	C	CCT	944.11	PASS	AB=0.968;AC=17;AF=0.327;AN=52;BaseQRankSum=6.129;DP=461;FS=3.778;HRun=0;HaplotypeScore=56.2968;InbreedingCoeff=0.3718;MQ=36.02;MQ0=74;MQRankSum=-5.306;QD=4.63;ReadPosRankSum=-2.613;VQSLOD=1.6074;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,2:15:29.14:158,0,29	1/1:1,2:3:5.98:54,6,0	0/1:105,0:10:12.25:12,0,220	0/0:128,0:20:15.63:0,16,358	./.	0/0:8,0:7:12.04:0,12,172	0/0:16,0:14:24.08:0,24,344	0/1:15,0:11:47.15:129,0,47	0/0:7,0:6:12.04:0,12,169	0/0:7,0:4:12.04:0,12,169	0/0:4,0:4:12.04:0,12,172	0/0:4,0:2:6.02:0,6,86	1/1:8,2:7:14.98:138,15,0	0/0:10,0:9:24.08:0,24,336	0/0:14,0:8:24.08:0,24,343	0/0:5,0:3:9.03:0,9,129	1/1:5,0:5:2.82:30,3,0	1/1:7,0:7:0.46:151,0,0	1/1:14,1:9:16.75:199,17,0	./.	0/0:10,3:9:0.47:0,0,1	0/0:4,0:3:9.03:0,9,129	0/1:4,0:4:27.71:41,0,28	0/0:15,0:11:2.41:0,2,9	0/0:8,0:8:21.07:0,21,297	0/1:11,1:6:4.35:95,0,4	0/0:3,0:2:0.89:0,1,2	1/1:4,0:4:9.02:98,9,0
chr10	70376349	.	A	ACCGCTGCTG	4177.29	PASS	AB=0.978;AC=26;AF=0.565;AN=46;BaseQRankSum=-0.572;DP=253;FS=64.758;HRun=0;HaplotypeScore=96.9532;InbreedingCoeff=0.6173;MQ=63.39;MQ0=0;MQRankSum=-3.533;QD=21.99;ReadPosRankSum=0.503;VQSLOD=0.0236;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:29.91:398,30,0	1/1:3,0:3:6.02:145,6,0	0/0:14,0:11:18:0,18,308	0/0:18,0:17:27.04:0,27,570	1/1:6,0:6:12.02:175,12,0	./.	0/0:11,0:11:21.06:0,21,477	1/1:15,0:15:26.52:466,27,0	0/0:1,0:1:2.99:0,3,24	./.	./.	0/0:4,0:4:9.03:0,9,214	1/1:10,0:10:25.43:289,25,0	0/0:1,0:1:3.01:0,3,77	./.	0/0:3,0:3:3.01:0,3,78	1/1:7,10:19:14.77:194,15,0	0/1:21,1:22:17.84:796,0,18	1/1:16,0:16:30.02:426,30,0	./.	0/1:36,0:36:26.48:285,0,26	0/0:3,0:3:6.02:0,6,175	1/1:4,0:4:8.38:86,8,0	1/1:21,1:22:20.69:356,21,0	0/0:7,0:7:18.02:0,18,278	1/1:13,0:13:24.04:356,24,0	1/1:2,0:2:6.02:123,6,0	1/1:3,0:3:3.01:84,3,0
chr10	70376357	.	T	TGCC	2257.95	PASS	AB=0.883;AC=25;AF=0.521;AN=48;BaseQRankSum=1.383;DP=233;FS=44.661;HRun=0;HaplotypeScore=63.7828;InbreedingCoeff=0.4492;MQ=60.21;MQ0=0;MQRankSum=-2.240;QD=12.69;ReadPosRankSum=-0.623;VQSLOD=0.9067;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:2.17:329,2,0	1/1:2,0:2:6.02:90,6,0	0/0:8,0:6:6.03:0,6,187	0/0:16,0:15:30.14:0,30,422	1/1:6,0:6:11.98:149,12,0	./.	0/0:11,0:11:24.05:0,24,329	0/1:6,7:12:63.67:186,0,64	0/0:1,0:1:3.01:0,3,51	./.	./.	0/0:3,0:3:8.96:0,9,119	1/1:10,0:10:13.61:177,14,0	0/0:1,0:1:3.01:0,3,48	0/0:1,0:1:3.01:0,3,48	0/0:3,0:3:3.01:0,3,51	1/1:18,0:18:0.37:100,0,0	0/1:21,0:21:9.28:235,0,9	0/1:14,0:13:32.86:237,0,33	./.	1/1:34,1:34:22.55:253,23,0	0/0:3,0:3:6.02:0,6,102	1/1:4,0:4:8.38:86,8,0	1/1:24,1:25:22.58:222,23,0	0/0:7,0:7:18.02:0,18,205	1/1:11,0:11:24.03:268,24,0	1/1:2,0:2:5.98:48,6,0	1/1:1,0:1:3.01:42,3,0
chr10	70376376	.	GCCACCGCCGCCA	G	1306.18	PASS	AB=0.810;AC=11;AF=0.275;AN=40;BaseQRankSum=6.490;DP=168;FS=4.850;HRun=0;HaplotypeScore=66.9188;InbreedingCoeff=0.3546;MQ=41.57;MQ0=0;MQRankSum=-5.115;QD=12.81;ReadPosRankSum=2.943;VQSLOD=0.9046;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:3.01:0,3,32	1/1:1,0:1:2.90:16,3,0	0/0:4,0:2:3.01:0,3,44	0/0:5,0:4:9.02:0,9,112	./.	./.	0/0:21,0:21:60.21:0,60,2846	0/0:8,0:7:0.34:0,0,73	0/0:3,0:3:9.03:0,9,362	./.	./.	0/0:5,0:5:11.67:0,12,421	1/1:3,10:13:18.06:580,18,0	0/0:1,0:1:3.01:0,3,77	0/0:3,0:3:9.03:0,9,442	0/0:2,0:2:6.02:0,6,146	0/1:11,0:16:0.11:230,0,0	0/1:23,0:23:44.02:217,0,44	0/0:4,0:3:8.82:0,9,67	./.	1/1:24,0:23:0.14:1,0,0	0/0:4,0:4:12.01:0,12,291	./.	1/1:5,18:23:11.87:322,12,0	0/0:2,0:2:6.02:0,6,250	./.	0/1:1,0:2:8.53:65,0,9	./.
chr10	70376379	.	ACCGCCGCCACCGCCGCCACCG	A	657.06	PASS	AB=0.883;AC=9;AF=0.237;AN=38;BaseQRankSum=4.274;DP=161;FS=3.632;HRun=0;HaplotypeScore=92.3788;InbreedingCoeff=0.1941;MQ=42.22;MQ0=0;MQRankSum=-4.674;QD=6.70;ReadPosRankSum=2.041;VQSLOD=1.3018;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:0:0,0,0	./.	0/0:4,0:2:3.01:0,3,87	./.	./.	./.	0/0:22,0:22:63.22:0,63,5086	0/0:6,0:5:0:0,0,0	0/0:4,0:4:12.04:0,12,828	0/0:1,0:1:3.01:0,3,148	./.	0/0:5,0:5:8.88:0,9,651	1/1:13,0:13:14.97:248,15,0	0/0:1,0:1:3.01:0,3,194	0/0:3,0:3:9.03:0,9,756	0/0:2,0:2:6.02:0,6,252	0/1:14,0:14:55.06:55,0,61	0/1:11,13:24:99:289,0,137	1/1:5,0:4:2.74:12,3,0	./.	1/1:21,0:20:0.31:1,0,0	0/0:4,0:4:6.02:0,6,417	./.	0/1:21,0:21:40.78:161,0,41	0/0:2,0:2:6.02:0,6,398	./.	0/0:2,0:2:4.26:0,4,40	./.
chr10	70376382	.	GCCGCCA	G	483.35	PASS	AB=0.883;AC=9;AF=0.225;AN=40;BaseQRankSum=6.088;DP=164;FS=0.000;HRun=0;HaplotypeScore=53.3748;InbreedingCoeff=0.1265;MQ=42.62;MQ0=0;MQRankSum=-5.029;QD=5.03;ReadPosRankSum=3.702;VQSLOD=0.9387;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:1.25:3,1,0	./.	0/0:2,0:1:3.01:0,3,39	./.	./.	0/0:1,0:1:3.01:0,3,41	0/0:25,0:25:72.25:0,72,2070	0/0:7,0:6:2.36:0,2,8	0/0:5,0:5:15.05:0,15,347	0/0:2,0:2:3.01:0,3,70	./.	0/0:4,0:4:11.87:0,12,273	1/1:11,0:11:15.05:220,15,0	0/0:3,0:3:9.03:0,9,147	0/0:3,0:3:9.03:0,9,278	0/0:2,0:2:6.02:0,6,121	0/1:10,5:15:23.78:134,0,24	0/1:23,0:23:72.57:73,0,110	0/0:5,0:4:0.47:0,0,1	./.	0/1:21,0:20:0.19:1,0,0	0/0:3,0:3:6.02:0,6,175	./.	0/1:21,0:21:16.32:124,0,16	0/0:2,0:2:6.02:0,6,153	./.	0/1:1,1:2:11.93:42,0,12	./.
chr10	70379085	.	AAGACTATT	A	10925.04	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.062;DP=588;FS=5.662;HRun=0;HaplotypeScore=172.5342;InbreedingCoeff=0.9968;MQ=81.36;MQ0=0;MQRankSum=-14.581;QD=56.61;ReadPosRankSum=-0.872;VQSLOD=4.2879;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,26:35:54.14:1416,54,0	0/0:5,0:5:15.05:0,15,637	0/0:22,0:22:63.20:0,63,2252	0/0:29,0:28:75.25:0,75,2759	1/1:1,17:18:42.10:1029,42,0	0/0:21,0:21:63.20:0,63,2652	0/0:40,0:40:99:0,114,4630	1/1:6,22:28:63.20:1706,63,0	0/0:25,0:25:75.26:0,75,3325	0/0:31,0:31:84.27:0,84,3547	0/0:10,0:10:27.09:0,27,1196	0/0:25,0:25:69.22:0,69,2738	0/0:17,0:17:48.16:0,48,2123	0/0:21,0:21:63.22:0,63,2685	0/0:21,0:21:63.22:0,63,2686	0/0:21,0:21:63.22:0,63,2584	1/1:3,17:20:36.12:1018,36,0	0/0:32,0:32:96.33:0,96,4022	1/1:2,19:21:54.15:1307,54,0	1/1:2,13:15:30.10:849,30,0	1/1:4,16:20:27.05:699,27,0	0/0:16,0:16:48.16:0,48,2000	0/0:18,0:18:51.17:0,51,2251	0/0:29,0:29:84.29:0,84,3548	0/0:12,0:12:30.10:0,30,1329	1/1:0,15:15:45.14:1204,45,0	1/1:0,12:12:36.12:1018,36,0	1/1:0,9:9:24.08:679,24,0
chr10	70379556	.	GT	G	2021.51	PASS	AB=0.741;AC=21;AF=0.375;AN=56;BaseQRankSum=8.400;DP=678;FS=2.650;HRun=15;HaplotypeScore=84.0595;InbreedingCoeff=-0.0277;MQ=73.37;MQ0=8;MQRankSum=0.576;QD=4.53;ReadPosRankSum=4.891;VQSLOD=1.8737;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:12,32:44:20.54:378,0,21	0/0:6,0:6:9:0,9,79	0/1:39,0:16:3.06:3,0,75	0/1:33,0:21:5.56:6,0,64	1/1:6,11:19:30.49:185,30,0	0/1:13,7:22:29.50:30,0,232	0/1:10,9:21:61.24:61,0,158	0/1:20,7:28:18.21:99,0,18	0/0:16,3:19:3.45:0,3,275	0/0:22,1:24:16.41:0,16,238	0/1:14,4:18:21.83:22,0,194	0/0:21,1:25:23.87:0,24,311	0/0:23,0:25:65.57:0,66,533	0/0:14,1:15:19.71:0,20,286	0/0:18,1:22:3.13:0,3,250	0/0:21,1:24:10.06:0,10,307	0/1:10,20:33:24.72:198,0,25	0/1:6,13:20:38.53:158,0,39	0/1:6,9:16:36.67:141,0,37	0/1:15,16:32:26.71:158,0,27	1/1:6,13:20:29.91:184,30,0	0/1:24,1:28:20.70:21,0,319	0/0:16,5:21:11.61:0,12,217	0/0:30,1:31:24.52:0,25,458	0/0:15,1:20:3.04:0,3,273	1/1:9,15:25:18.47:221,18,0	0/1:10,15:28:8.82:167,0,9	1/1:4,12:19:10.15:166,10,0
chr10	70380175	.	AC	A	5554.40	PASS	AB=0.915;AC=28;AF=0.500;AN=56;BaseQRankSum=6.793;DP=635;FS=0.339;HRun=10;HaplotypeScore=70.6935;InbreedingCoeff=0.7265;MQ=82.01;MQ0=0;MQRankSum=0.026;QD=15.65;ReadPosRankSum=1.559;VQSLOD=5.2983;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,1:41:54.80:0,55,819	1/1:1,7:8:20.99:182,21,0	0/0:26,1:27:15.98:0,16,321	0/1:20,0:18:36.74:37,0,130	0/1:13,3:16:19.02:19,0,266	0/0:20,0:20:21.05:0,21,224	0/0:24,0:24:57.13:0,57,613	1/1:5,19:25:55.97:465,56,0	0/0:17,2:19:16.07:0,16,397	0/0:18,1:19:4.04:0,4,272	0/0:13,0:13:21.06:0,21,232	0/0:16,0:16:42.09:0,42,443	1/1:4,23:28:28.83:467,29,0	0/1:15,2:18:1.01:1,0,416	0/0:40,3:43:18.06:0,18,853	0/0:13,0:13:24.06:0,24,258	0/0:25,1:26:43.10:0,43,686	1/1:4,10:15:32.01:266,32,0	1/1:6,23:30:64.72:546,65,0	1/1:5,24:29:74.87:635,75,0	1/1:6,28:34:80.95:699,81,0	0/0:18,0:18:3.96:0,4,222	1/1:4,16:20:53.91:459,54,0	1/1:3,25:28:65.98:573,66,0	0/1:20,2:22:1.99:2,0,208	1/1:8,18:27:52.99:448,53,0	1/1:2,25:27:65.98:572,66,0	1/1:1,7:8:21:182,21,0
chr10	70380389	.	TC	T	9405.35	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=15.964;DP=597;FS=5.309;HRun=6;HaplotypeScore=81.8526;InbreedingCoeff=0.9970;MQ=90.00;MQ0=0;MQRankSum=-3.367;QD=27.34;ReadPosRankSum=2.496;VQSLOD=5.4673;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,47:50:99:1451,135,0	1/1:2,8:10:21.05:224,21,0	0/0:19,0:19:48.14:0,48,600	0/0:26,0:26:66.19:0,66,826	1/1:2,18:20:45.11:484,45,0	0/0:14,0:14:42.14:0,42,550	0/0:22,0:22:60.14:0,60,730	1/1:1,33:34:96.23:1024,96,0	0/0:20,0:20:48.13:0,48,601	0/0:20,0:20:60.20:0,60,787	0/0:19,0:19:51.17:0,51,671	0/0:21,0:21:63.17:0,63,787	1/1:1,19:20:17.67:541,18,0	0/0:21,0:21:63.19:0,63,809	0/0:28,0:28:78.24:0,78,1010	0/0:7,0:7:18.06:0,18,237	1/1:1,23:24:54.14:580,54,0	1/1:1,17:18:45.11:483,45,0	1/1:2,20:22:60.12:634,60,0	1/1:1,16:17:42.07:440,42,0	1/1:0,27:27:78.20:838,78,0	0/0:18,0:18:51.15:0,51,656	1/1:2,19:21:54.13:580,54,0	1/1:0,22:22:51.13:548,51,0	0/0:18,0:18:54.18:0,54,709	1/1:3,27:30:78.19:838,78,0	1/1:0,20:20:41.73:451,42,0	1/1:0,9:9:27.07:290,27,0
chr10	70381088	.	CTG	C	169.51	PASS	AB=0.974;AC=15;AF=0.288;AN=52;BaseQRankSum=3.658;DP=727;FS=13.924;HRun=0;HaplotypeScore=116.8762;InbreedingCoeff=0.2146;MQ=61.21;MQ0=11;MQRankSum=-0.158;QD=0.78;ReadPosRankSum=0.351;VQSLOD=1.7004;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:5.98:0,6,47	1/1:8,1:9:2.98:32,3,0	./.	./.	0/0:31,0:30:2.62:0,3,22	0/1:24,1:24:14.66:15,0,137	0/0:31,0:29:7.41:0,7,145	0/0:24,0:20:5.39:0,5,22	0/0:19,0:19:18.48:0,18,223	0/1:35,1:35:19.34:19,0,108	0/0:10,0:10:2.99:0,3,24	0/0:24,0:24:18.56:0,19,193	1/1:15,1:16:2.90:67,3,0	0/0:26,0:26:8.95:0,9,86	0/1:28,2:30:49.28:49,0,71	0/1:22,0:21:15.99:16,0,108	0/0:30,0:29:14.85:0,15,104	1/1:14,0:15:5.68:28,6,0	0/0:36,0:32:8.49:0,8,60	0/0:27,0:27:9.01:0,9,110	0/0:61,0:59:9.97:0,10,151	0/0:28,0:28:2.11:0,2,43	1/1:14,0:15:0.46:1,0,0	1/1:27,3:28:12.24:74,12,0	0/0:20,0:22:15.02:0,15,163	0/0:23,0:24:23.01:0,23,183	0/1:19,0:18:12.68:13,0,22	0/0:15,0:14:6.48:0,6,71
chr10	70381147	.	C	CTG	6188.95	PASS	AB=0.732;AC=23;AF=0.411;AN=56;BaseQRankSum=5.995;DP=700;FS=29.932;HRun=0;HaplotypeScore=155.3784;InbreedingCoeff=0.4504;MQ=48.13;MQ0=47;MQRankSum=-4.860;QD=19.10;ReadPosRankSum=-1.168;VQSLOD=3.1759;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,17:22:31.21:618,31,0	0/1:9,5:14:99:220,0,123	0/0:85,0:18:8.90:0,9,245	0/0:72,0:15:11.59:0,12,154	1/1:7,12:17:33.11:510,33,0	0/0:16,0:16:23.53:0,24,293	0/0:24,0:22:17.84:0,18,507	1/1:17,14:27:27.91:926,28,0	0/0:26,0:26:29.44:0,29,519	0/0:28,0:27:63.47:0,63,736	0/0:9,0:9:27.07:0,27,317	0/0:28,0:27:66.06:0,66,778	0/1:19,6:24:99:209,0,260	0/0:15,0:14:33.09:0,33,398	0/0:19,0:19:36.08:0,36,425	0/0:17,0:17:35.91:0,36,413	1/1:12,4:12:7.79:178,8,0	0/1:4,5:8:19.38:229,0,19	1/1:25,11:31:13.66:650,14,0	1/1:6,6:11:20.97:345,21,0	1/1:29,16:44:23.41:810,23,0	0/0:15,0:15:22.26:0,22,253	0/1:14,8:22:99:299,0,247	0/1:18,7:22:59.38:223,0,59	0/0:19,0:18:47.80:0,48,562	0/1:14,10:25:20.97:640,0,21	0/1:5,3:6:27.37:135,0,27	1/1:7,5:9:12.04:198,12,0
chr10	70381185	.	GTCTC	G	7269.98	PASS	AB=0.594;AC=27;AF=0.482;AN=56;BaseQRankSum=13.673;DP=535;FS=3.302;HRun=0;HaplotypeScore=138.7461;InbreedingCoeff=0.7634;MQ=63.40;MQ0=19;MQRankSum=-11.052;QD=36.35;ReadPosRankSum=-2.795;VQSLOD=4.6129;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:23:60.01:933,60,0	1/1:3,7:10:24.08:405,24,0	0/0:52,0:23:37.51:0,38,675	0/0:58,0:27:54.09:0,54,963	1/1:1,9:10:27.09:496,27,0	0/0:12,0:12:36.12:0,36,927	0/0:29,0:29:81.28:0,81,2057	1/1:10,4:10:24.05:385,24,0	0/0:20,0:20:60.21:0,60,1537	0/0:30,0:30:90.28:0,90,2307	0/0:13,0:13:39.13:0,39,1036	0/0:26,0:26:75.26:0,75,1997	1/1:5,16:21:51.13:897,51,0	0/0:19,0:19:57.20:0,57,1573	0/0:25,0:25:75.26:0,75,1982	0/0:16,0:16:48.16:0,48,1343	1/1:5,7:12:13.67:405,14,0	1/1:0,3:3:9.03:148,9,0	0/1:5,10:15:27.35:604,0,27	1/1:0,6:6:18.06:315,18,0	1/1:8,9:17:30.05:553,30,0	0/0:15,0:15:42.14:0,42,1175	1/1:2,14:16:30.09:505,30,0	0/1:9,16:24:99:486,0,150	0/0:19,0:19:51.18:0,51,1355	0/1:4,12:15:41.85:665,0,42	1/1:0,4:4:9.03:179,9,0	1/1:1,5:7:18.02:293,18,0
chr10	70381275	.	CTG	C	1010.74	PASS	AB=0.943;AC=12;AF=0.214;AN=56;BaseQRankSum=6.749;DP=747;FS=17.092;HRun=0;HaplotypeScore=194.2003;InbreedingCoeff=0.0320;MQ=52.76;MQ0=42;MQRankSum=-0.744;QD=3.41;ReadPosRankSum=0.564;VQSLOD=1.7129;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,1:32:10.24:10,0,74	0/1:8,1:9:12.95:35,0,13	0/0:54,0:12:29.89:0,30,347	0/0:64,0:12:7.32:0,7,38	0/1:24,0:24:15.14:73,0,15	0/0:25,0:24:66.21:0,66,1134	0/0:26,0:24:57.61:0,58,938	0/1:48,1:43:91.83:402,0,92	0/0:24,0:24:45.11:0,45,715	0/0:36,0:35:99:0,102,1613	0/0:18,0:18:42.04:0,42,647	0/0:25,0:25:56.81:0,57,765	0/1:19,0:18:7.17:29,0,7	0/0:27,0:27:62.79:0,63,959	0/0:19,0:19:42.04:0,42,530	0/0:11,0:10:20.42:0,20,287	0/0:25,0:25:19.52:0,20,157	1/1:12,0:13:25.39:162,25,0	0/1:20,0:23:21.19:21,0,190	0/1:16,0:16:2.78:25,0,3	0/1:48,4:51:61.57:62,0,84	0/0:20,0:20:50.95:0,51,840	0/1:19,1:20:0.98:1,0,39	0/0:33,0:31:9.51:0,10,104	0/0:27,0:26:71.03:0,71,1124	0/1:31,3:33:93.36:341,0,93	0/0:13,0:13:7.92:0,8,44	0/0:3,0:3:6.34:0,6,21
chr10	70381281	.	GGT	G	879.29	PASS	AB=0.858;AC=15;AF=0.268;AN=56;BaseQRankSum=4.006;DP=751;FS=3.836;HRun=0;HaplotypeScore=186.6721;InbreedingCoeff=-0.3835;MQ=52.16;MQ0=55;MQRankSum=-5.760;QD=2.43;ReadPosRankSum=-5.219;VQSLOD=0.9554;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:27:22.35:0,22,619	0/1:8,2:9:18.47:18,0,233	0/0:59,0:12:15.04:0,15,167	0/0:66,0:12:1.43:0,1,32	0/1:16,9:25:73.06:73,0,386	0/0:25,0:24:60.19:0,60,948	0/1:28,1:27:8.44:8,0,765	0/1:40,13:43:99:348,0,647	0/0:22,0:22:34.72:0,35,485	0/0:40,0:38:87.28:0,87,1347	0/0:14,1:14:10.22:0,10,420	0/0:20,1:21:7.93:0,8,641	0/1:11,5:16:81.46:81,0,176	0/0:24,2:26:7.93:0,8,606	0/0:19,0:19:30.23:0,30,553	0/1:9,2:10:56.33:56,0,179	0/1:24,1:24:7.57:8,0,544	0/1:2,2:12:17.91:18,0,159	0/1:24,1:19:15.18:15,0,188	0/0:13,4:16:10.97:0,11,368	0/1:51,3:51:44.70:45,0,839	0/0:21,1:22:19.99:0,20,813	0/1:14,6:19:99:162,0,253	0/1:26,4:29:68.78:69,0,343	0/0:27,1:26:26.18:0,26,978	0/1:32,4:32:88.83:89,0,548	0/1:10,1:10:13.09:13,0,286	0/1:2,1:3:28.14:28,0,85
chr10	70381321	.	GGTGT	G	1467.60	PASS	AB=0.827;AC=12;AF=0.214;AN=56;BaseQRankSum=6.395;DP=774;FS=6.967;HRun=0;HaplotypeScore=166.1931;InbreedingCoeff=-0.2867;MQ=42.09;MQ0=93;MQRankSum=-9.220;QD=5.64;ReadPosRankSum=3.135;VQSLOD=2.2204;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,1:23:21.22:21,0,283	0/1:7,2:7:87.22:87,0,97	0/0:58,0:1:3.01:0,3,48	0/0:68,0:6:9.03:0,9,177	0/1:17,9:25:99:309,0,357	0/0:22,0:21:38.77:0,39,797	0/0:37,0:36:87.23:0,87,2014	0/1:47,4:19:18.05:18,0,512	0/0:19,0:18:38.44:0,38,846	0/0:50,0:41:90.08:0,90,1973	0/0:19,0:17:42.14:0,42,947	0/0:17,0:17:38.50:0,39,746	0/1:13,4:17:99:171,0,313	0/0:23,0:21:48.16:0,48,1150	0/0:21,0:21:47.86:0,48,994	0/0:15,0:13:27.09:0,27,650	0/0:19,1:19:21.78:0,22,502	0/1:10,3:13:99:123,0,241	0/1:23,3:11:33.15:33,0,151	0/1:9,8:15:99:302,0,267	0/0:66,0:60:48.79:0,49,1055	0/0:22,0:20:51.16:0,51,1199	0/1:19,5:24:99:213,0,441	0/0:26,1:26:13.05:0,13,494	0/0:21,0:21:48.11:0,48,1003	0/1:27,2:21:99:120,0,254	0/1:16,2:14:78.31:78,0,330	0/1:2,3:5:49.88:141,0,50
chr10	70381366	.	CTCTG	C	439.55	PASS	AB=0.860;AC=4;AF=0.071;AN=56;BaseQRankSum=5.538;DP=706;FS=13.806;HRun=0;HaplotypeScore=152.0054;InbreedingCoeff=-0.0919;MQ=48.08;MQ0=65;MQRankSum=-4.990;QD=5.86;ReadPosRankSum=0.382;VQSLOD=2.1170;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:51:0,51,1350	0/1:6,3:9:99:186,0,326	0/0:52,0:6:0.39:0,0,182	0/0:61,0:4:4.83:0,5,25	0/0:18,0:18:32.24:0,32,885	0/0:17,0:17:41.69:0,42,1137	0/0:25,0:25:72.15:0,72,1733	0/0:51,0:39:99:0,102,2339	0/0:19,0:18:44.92:0,45,1106	0/0:31,0:30:87.28:0,87,2139	0/0:17,0:17:51.04:0,51,1092	0/0:19,0:19:54.11:0,54,1271	0/1:23,3:25:99:106,0,1418	0/0:19,0:18:51.16:0,51,1334	0/0:17,0:17:51.03:0,51,1254	0/0:19,0:18:54.17:0,54,1344	0/0:29,0:28:72.19:0,72,1937	0/0:19,0:19:48.05:0,48,1170	0/0:15,0:7:11.69:0,12,216	0/1:17,0:17:13.91:14,0,589	0/0:59,0:58:99:0,103,3560	0/0:25,0:24:69.04:0,69,1387	0/1:17,6:23:99:240,0,1065	0/0:34,0:32:70.57:0,71,1795	0/0:19,0:19:50.96:0,51,1299	0/0:21,0:20:57.17:0,57,1434	0/0:7,0:7:20.81:0,21,512	0/0:13,0:13:32.40:0,32,676
chr10	70381410	.	C	CTG	4260.69	PASS	AB=0.755;AC=12;AF=0.214;AN=56;BaseQRankSum=2.620;DP=780;FS=11.534;HRun=0;HaplotypeScore=159.7113;InbreedingCoeff=0.6218;MQ=57.65;MQ0=41;MQRankSum=-4.909;QD=18.05;ReadPosRankSum=-1.780;VQSLOD=3.9501;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:81.13:0,81,934	0/0:11,0:11:14.91:0,15,160	0/1:51,0:14:1.67:2,0,190	0/0:48,0:17:8.15:0,8,107	0/0:13,0:12:30.06:0,30,332	0/0:18,0:17:20.25:0,20,460	0/0:33,0:35:74.84:0,75,836	1/1:16,16:25:51.16:808,51,0	0/0:20,0:20:45.13:0,45,535	0/0:36,0:34:69.03:0,69,812	0/0:14,0:13:24.06:0,24,282	0/0:22,0:23:53.99:0,54,631	0/0:23,0:23:42.05:0,42,483	0/0:29,0:29:75.20:0,75,906	0/0:19,0:19:48.13:0,48,576	0/0:18,0:18:45.13:0,45,541	0/0:36,0:37:85.57:0,86,980	0/0:28,0:28:42.13:0,42,517	0/1:11,5:10:88.82:176,0,89	1/1:5,6:11:18.06:268,18,0	1/1:34,35:68:32.40:1599,32,0	0/0:22,0:23:57:0,57,666	0/0:22,0:22:33.10:0,33,406	0/0:62,0:62:99:0,135,1587	0/0:22,0:22:50.97:0,51,590	0/1:17,16:31:7.60:792,0,8	1/1:2,6:8:18.02:252,18,0	0/1:4,10:14:9.79:364,0,10
chr10	70381446	.	TTG	T	3797.66	PASS	AB=0.934;AC=24;AF=0.429;AN=56;BaseQRankSum=10.176;DP=712;FS=1.923;HRun=0;HaplotypeScore=157.5884;InbreedingCoeff=0.1199;MQ=55.12;MQ0=29;MQRankSum=1.460;QD=8.44;ReadPosRankSum=2.569;VQSLOD=3.6672;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,5:35:12.23:408,0,12	1/1:3,2:5:9.01:94,9,0	0/0:37,0:17:9.40:0,9,90	0/0:55,0:27:21.12:0,21,178	0/1:12,1:12:13.21:161,0,13	0/0:18,0:17:24.03:0,24,314	0/1:36,0:33:95.27:95,0,421	1/1:27,10:32:20.65:464,21,0	0/0:22,0:22:1.33:0,1,362	0/0:28,2:29:0.17:0,0,650	0/1:14,0:14:19.60:20,0,319	0/0:21,0:21:14.58:0,15,539	0/1:16,1:18:25.16:146,0,25	0/0:28,0:28:50.90:0,51,587	0/1:17,0:16:19.75:20,0,389	0/0:13,0:12:21.06:0,21,296	1/1:26,3:28:13.37:367,13,0	0/1:30,1:30:21.06:46,0,21	0/1:14,2:13:3.07:46,0,3	0/1:11,1:12:26.48:79,0,26	0/1:48,6:49:1.81:179,0,2	0/0:25,0:25:47.91:0,48,634	0/1:12,2:13:2.93:116,0,3	1/1:64,6:67:99:1246,103,0	0/0:13,0:13:19.28:0,19,232	0/1:29,3:28:5.03:177,0,5	1/1:5,2:7:9.02:100,9,0	1/1:7,1:8:3.01:35,3,0
chr10	70381465	.	TGC	T	2628.60	PASS	AB=0.929;AC=39;AF=0.696;AN=56;BaseQRankSum=8.228;DP=706;FS=52.757;HRun=0;HaplotypeScore=154.9929;InbreedingCoeff=-0.2101;MQ=47.12;MQ0=44;MQRankSum=1.458;QD=3.96;ReadPosRankSum=-2.752;VQSLOD=0.7147;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:39:31.35:253,31,0	1/1:4,0:4:8.68:53,9,0	1/1:13,0:2:5.84:34,6,0	0/1:32,0:13:9.66:75,0,10	1/1:21,0:20:13.54:81,14,0	0/1:21,0:19:99:105,0,103	0/1:35,0:31:74.02:74,0,198	0/1:42,0:31:14.93:187,0,15	0/1:23,0:23:33.91:34,0,169	0/1:26,11:36:93.37:93,0,246	0/1:10,6:16:27.25:27,0,161	0/0:25,0:23:10.48:0,10,272	1/1:16,0:15:9.04:96,9,0	0/1:26,0:25:32.66:33,0,209	0/0:18,0:17:0.59:0,1,182	0/1:13,0:10:9.35:9,0,118	1/1:33,0:31:34.90:296,35,0	0/1:9,17:25:19.90:20,0,38	0/1:16,0:11:31.06:31,0,35	1/1:13,0:12:0.97:70,1,0	1/1:55,0:47:37.69:217,38,0	0/1:32,0:30:27.49:27,0,257	1/1:15,0:13:12.93:60,13,0	1/1:74,3:75:52.36:625,52,0	0/1:20,0:17:56.50:57,0,67	1/1:24,0:19:8.85:102,9,0	1/1:10,0:10:8.41:97,8,0	1/1:3,0:3:5.83:33,6,0
chr10	70383617	.	TGA	T	12453.62	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=17.711;DP=772;FS=9.603;HRun=0;HaplotypeScore=114.8906;InbreedingCoeff=0.9993;MQ=73.66;MQ0=2;MQRankSum=-1.999;QD=30.45;ReadPosRankSum=1.625;VQSLOD=6.5681;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,55:57:99:1870,147,0	1/1:3,7:10:24.08:305,24,0	0/0:22,0:22:51.10:0,51,734	0/0:29,0:26:44.78:0,45,662	1/1:5,19:23:53.84:664,54,0	0/0:28,0:28:53.59:0,54,1230	0/0:33,0:33:81.22:0,81,1292	1/1:4,26:30:78.22:962,78,0	0/0:29,0:29:69.24:0,69,1154	0/0:33,0:34:84.28:0,84,1385	0/0:22,0:22:48.15:0,48,777	0/0:28,1:29:43.08:0,43,1213	1/1:7,31:39:87.11:1083,87,0	0/0:29,0:29:81.28:0,81,1355	0/0:29,0:29:69.22:0,69,1129	0/0:36,0:36:99:0,105,1757	1/1:3,31:34:90.29:1141,90,0	1/1:2,21:23:60.19:763,60,0	1/1:5,21:26:66.15:791,66,0	1/1:5,10:15:27.09:344,27,0	1/1:1,28:29:78.25:993,78,0	0/0:22,0:22:63.22:0,63,1053	1/1:3,16:19:45.14:573,45,0	1/1:4,35:39:84.27:1069,84,0	0/0:21,0:21:51.17:0,51,853	1/1:3,24:27:69.21:866,69,0	1/1:5,19:24:57.18:725,57,0	1/1:3,9:12:24.08:305,24,0
chr10	70392769	.	TCACACACACACACACA	T	2053.17	PASS	AB=0.885;AC=22;AF=0.423;AN=52;BaseQRankSum=6.353;DP=623;FS=16.615;HRun=0;HaplotypeScore=237.2063;InbreedingCoeff=0.4644;MQ=66.92;MQ0=11;MQRankSum=-5.320;QD=7.52;ReadPosRankSum=0.419;VQSLOD=1.3082;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:24:3.01:112,3,0	0/1:9,0:10:33.41:37,0,33	./.	./.	1/1:18,0:22:3.01:112,3,0	0/0:16,0:16:18.06:0,18,972	0/0:25,0:25:42.14:0,42,2198	0/0:30,0:29:3.11:0,3,9	0/0:26,0:26:33.02:0,33,1515	0/0:20,0:18:24.08:0,24,1233	0/0:10,0:10:12.04:0,12,576	0/0:14,0:15:9.03:0,9,395	1/1:15,5:20:12.04:522,12,0	0/0:19,0:19:18.53:0,19,1157	0/0:17,0:18:27.09:0,27,1567	0/0:25,0:35:15.05:0,15,1086	1/1:20,0:25:8.93:334,9,0	0/1:18,0:20:58.75:213,0,59	0/1:14,1:15:0.67:125,0,1	1/1:12,3:15:6.02:261,6,0	1/1:41,0:41:3:46,3,0	0/0:21,0:21:21.07:0,21,1082	1/1:12,6:18:0.47:1,0,0	0/1:29,11:40:17.50:124,0,17	0/0:23,0:22:21.07:0,21,1344	0/0:14,0:13:0:0,0,0	1/1:10,2:12:4.16:258,4,0	1/1:11,0:10:3:72,3,0
chr10	70396244	.	G	GC	2322.56	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-1.791;DP=573;FS=7.801;HRun=8;HaplotypeScore=68.3062;InbreedingCoeff=0.9785;MQ=85.92;MQ0=0;MQRankSum=-3.015;QD=15.91;ReadPosRankSum=0.635;VQSLOD=3.3228;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,1:13:8.56:44,9,0	1/1:0,7:7:21.06:242,21,0	0/0:23,0:23:40.59:0,41,322	0/0:19,0:19:11.74:0,12,220	1/1:7,1:19:13.56:64,14,0	0/0:17,0:17:45:0,45,404	0/0:24,0:24:59.98:0,60,534	0/0:26,0:26:48:0,48,439	0/0:19,0:19:47.99:0,48,434	0/0:13,0:13:36:0,36,326	0/0:14,0:14:32.97:0,33,295	0/0:18,0:18:51.02:0,51,463	1/1:2,17:19:23.68:526,24,0	0/0:22,0:22:57.01:0,57,522	0/0:29,0:29:78.01:0,78,704	0/0:17,0:17:48.01:0,48,435	1/1:7,1:26:34.09:173,34,0	1/1:4,0:18:31.37:162,31,0	0/0:14,0:14:36:0,36,325	0/0:24,0:24:66.01:0,66,599	0/0:41,0:41:99:0,105,960	0/0:21,0:21:51.01:0,51,466	1/1:1,19:20:48.14:554,48,0	1/1:1,22:23:66.20:762,66,0	0/0:30,0:30:81.02:0,81,737	0/0:22,0:22:60.02:0,60,546	0/0:21,1:22:25.41:0,25,487	0/0:12,0:12:32.98:0,33,290
chr10	70396644	.	AT	A	2597.68	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.853;DP=415;FS=28.156;HRun=2;HaplotypeScore=44.7030;InbreedingCoeff=0.9800;MQ=79.73;MQ0=0;MQRankSum=-2.460;QD=29.52;ReadPosRankSum=2.922;VQSLOD=1.7668;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:39.06:485,39,0	0/0:6,0:6:12.04:0,12,180	0/0:15,0:13:35.12:0,35,453	0/0:14,0:10:24.08:0,24,359	1/1:2,25:27:69.22:895,69,0	0/0:15,0:15:42.14:0,42,629	0/0:13,0:13:39.05:0,39,556	0/0:28,0:28:81.27:0,81,1199	0/0:6,0:6:15.05:0,15,225	0/0:26,0:26:78.26:0,78,1163	0/0:9,0:9:27.09:0,27,405	0/0:10,0:10:30.10:0,30,448	0/0:8,0:8:24.08:0,24,359	0/0:14,0:14:39.13:0,39,583	0/0:9,0:9:27.09:0,27,403	0/0:10,0:10:30.10:0,30,450	1/1:2,22:24:15.62:695,16,0	1/1:0,19:19:54.13:682,54,0	0/0:19,0:19:57.18:0,57,816	0/0:21,0:21:60.20:0,60,899	0/0:10,0:10:30.10:0,30,448	0/0:9,0:9:27.09:0,27,405	0/0:17,0:17:51.17:0,51,764	0/0:11,0:11:33.07:0,33,469	0/0:10,0:10:30.10:0,30,450	0/0:18,0:18:54.18:0,54,809	0/0:19,0:19:57.15:0,57,794	0/0:10,0:10:24.08:0,24,359
chr10	70397739	.	AGTGTGT	A	755.75	PASS	AB=0.897;AC=16;AF=0.333;AN=48;BaseQRankSum=4.049;DP=572;FS=3.461;HRun=0;HaplotypeScore=110.9340;InbreedingCoeff=0.7543;MQ=66.74;MQ0=19;MQRankSum=-2.019;QD=4.34;ReadPosRankSum=-0.322;VQSLOD=2.2310;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:27.07:0,27,697	1/1:7,0:7:3.01:42,3,0	./.	./.	0/0:12,0:15:15.05:0,15,337	0/0:17,0:17:15.04:0,15,305	0/0:31,0:32:27.08:0,27,721	./.	0/0:17,0:19:12.03:0,12,221	0/0:26,0:24:20.12:0,20,452	0/0:10,0:10:12.02:0,12,244	0/0:16,0:15:6.02:0,6,178	1/1:12,8:20:15.05:293,15,0	0/0:13,0:13:14.62:0,15,393	0/0:17,0:17:15.05:0,15,371	0/0:19,0:20:12.04:0,12,299	0/0:23,0:22:24.06:0,24,559	0/0:22,0:27:11.98:0,12,121	./.	1/1:9,0:10:6.02:102,6,0	1/1:39,0:37:6.48:87,6,0	0/0:19,0:19:30.10:0,30,823	1/1:14,4:17:2.97:20,3,0	0/1:23,8:31:0:0,0,0	0/0:17,0:18:19.88:0,20,511	1/1:13,7:20:11.12:208,11,0	1/1:15,5:20:7.75:160,8,0	0/1:6,0:5:0:0,0,0
chr10	70398107	.	GAA	G	3818.26	PASS	AB=0.975;AC=16;AF=0.286;AN=56;BaseQRankSum=5.529;DP=435;FS=6.696;HRun=7;HaplotypeScore=82.1588;InbreedingCoeff=0.8377;MQ=52.67;MQ0=12;MQRankSum=-7.459;QD=28.93;ReadPosRankSum=1.332;VQSLOD=3.4008;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:12:13.37:0,13,285	0/0:7,0:5:12.04:0,12,183	0/0:20,0:8:4.97:0,5,52	0/1:18,0:9:3.20:3,0,8	0/0:25,0:24:57.57:0,58,866	0/0:15,0:15:42.71:0,43,727	0/0:18,0:17:50.17:0,50,915	1/1:1,31:32:91.96:1484,92,0	0/0:11,0:11:29.91:0,30,550	0/0:19,0:18:53.91:0,54,974	0/0:14,0:14:35.60:0,36,628	0/0:17,0:17:50.66:0,51,881	0/0:15,0:14:24.88:0,25,496	0/0:16,0:16:34.75:0,35,582	0/0:16,0:16:37.51:0,38,685	0/0:12,0:12:27.03:0,27,431	0/0:25,0:21:60.10:0,60,872	0/0:9,0:9:24.08:0,24,426	1/1:0,12:12:36.12:516,36,0	1/1:1,11:11:21.07:306,21,0	1/1:2,3:4:6.02:84,6,0	0/0:17,0:17:22.33:0,22,450	0/0:11,0:10:13.14:0,13,289	0/1:9,0:9:0.48:0,0,54	0/0:20,0:19:51.14:0,51,846	1/1:4,16:20:54.44:773,54,0	1/1:1,14:15:32.94:482,33,0	1/1:4,4:5:12.02:170,12,0
chr10	70398109	.	ACC	A	852.91	PASS	AB=0.926;AC=18;AF=0.321;AN=56;BaseQRankSum=10.043;DP=438;FS=0.925;HRun=2;HaplotypeScore=92.8121;InbreedingCoeff=0.5851;MQ=54.98;MQ0=12;MQRankSum=-8.009;QD=5.26;ReadPosRankSum=1.630;VQSLOD=-0.2438;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,1:12:14.79:0,15,186	0/0:6,0:4:8.97:0,9,79	0/1:21,0:10:23.69:24,0,99	0/0:20,0:11:6.08:0,6,26	0/0:25,0:24:12.85:0,13,501	0/0:16,0:16:44.88:0,45,624	0/0:19,0:18:50.19:0,50,731	1/1:32,0:32:74.42:321,74,0	0/0:10,1:11:5.44:0,5,360	0/0:18,0:17:51.08:0,51,699	0/0:15,0:15:39.07:0,39,562	0/0:17,0:17:50.73:0,51,680	0/1:14,1:14:99:103,0,293	0/0:15,0:15:26.08:0,26,383	0/0:16,0:16:41.23:0,41,517	0/0:11,0:11:10.05:0,10,298	0/0:25,0:21:31.70:0,32,458	0/0:9,0:9:12.22:0,12,217	1/1:12,0:12:28.87:119,29,0	1/1:12,0:11:18.20:80,18,0	1/1:5,0:4:5.39:23,5,0	0/0:18,0:18:29.14:0,29,388	0/1:9,1:9:53.82:54,0,151	0/1:8,1:9:14.15:31,0,14	0/0:18,0:17:45.12:0,45,629	1/1:20,0:20:23.56:141,24,0	1/1:15,0:15:24.23:125,24,0	1/1:8,0:6:7.38:26,7,0
chr10	70398111	.	CAAA	C	1893.93	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=7.751;DP=469;FS=9.559;HRun=15;HaplotypeScore=100.7114;InbreedingCoeff=0.9008;MQ=54.22;MQ0=13;MQRankSum=-7.055;QD=16.76;ReadPosRankSum=2.572;VQSLOD=2.1547;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:19:27.93:0,28,361	0/0:4,0:5:8.76:0,9,98	0/0:26,0:10:18:0,18,197	0/0:25,0:13:14.28:0,14,97	0/0:21,0:32:49.48:0,49,625	0/0:17,0:17:39.13:0,39,638	0/0:17,0:17:45.15:0,45,802	1/1:10,21:32:59.91:668,60,0	0/0:9,0:12:27.02:0,27,363	0/0:18,0:18:26.17:0,26,397	0/0:12,0:15:39.13:0,39,609	0/0:16,0:17:39.07:0,39,600	0/0:14,0:13:15.66:0,16,117	0/0:16,0:18:44.65:0,45,686	0/0:17,0:17:33.09:0,33,547	0/0:12,0:12:32.97:0,33,466	0/0:17,0:21:42.14:0,42,630	0/0:3,0:8:21.07:0,21,311	1/1:3,10:13:36.02:391,36,0	1/1:6,6:11:18.02:200,18,0	1/1:4,1:4:3:33,3,0	0/0:17,0:18:27.09:0,27,445	0/0:10,0:9:12.48:0,12,132	0/1:9,0:8:0:0,0,1	0/0:20,0:21:54.13:0,54,835	1/1:4,13:18:34.37:391,34,0	1/1:6,9:16:26.91:297,27,0	1/1:4,4:5:9:101,9,0
chr10	70399760	.	CAG	C	171.18	PASS	AB=0.976;AC=16;AF=0.364;AN=44;BaseQRankSum=3.156;DP=495;FS=14.003;HRun=0;HaplotypeScore=88.3654;InbreedingCoeff=-0.0267;MQ=38.95;MQ0=104;MQRankSum=0.723;QD=0.77;ReadPosRankSum=-1.224;VQSLOD=0.4244;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:20:1.61:13,0,2	1/1:3,1:4:3:28,3,0	./.	./.	0/1:23,0:18:7.12:7,0,126	0/1:12,0:11:11.63:12,0,81	0/1:35,0:32:14:14,0,311	0/0:26,0:20:14.76:0,15,104	0/1:19,0:19:9.36:9,0,101	0/0:20,0:19:32.33:0,32,311	0/1:18,0:17:0.31:0,0,225	0/0:16,0:17:9.99:0,10,254	1/1:17,4:21:15.09:117,15,0	0/1:13,0:13:8.44:8,0,38	0/0:26,0:26:0.09:0,0,348	0/0:21,0:19:18.05:0,18,243	1/1:7,0:6:6.01:26,6,0	./.	0/0:13,0:12:0.89:0,1,2	./.	./.	0/1:11,0:15:15.34:15,0,68	./.	0/0:10,0:9:0:0,0,1	0/1:18,0:18:34.91:35,0,74	0/1:13,0:9:13.41:14,0,13	0/0:16,0:12:3.62:0,4,15	0/0:7,0:6:0.94:0,1,2
chr10	70399799	.	AGT	A	1282.11	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=7.958;DP=503;FS=0.967;HRun=0;HaplotypeScore=86.0312;InbreedingCoeff=0.8217;MQ=65.99;MQ0=15;MQRankSum=-2.540;QD=12.95;ReadPosRankSum=-0.048;VQSLOD=3.0256;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:22:32.63:258,33,0	1/1:5,0:5:5.91:38,6,0	0/0:21,0:12:22.19:0,22,248	0/0:31,0:18:3.99:0,4,180	0/1:21,0:17:6.78:186,0,7	0/0:16,0:16:22.18:0,22,255	0/0:31,0:29:53.39:0,53,632	0/0:35,0:34:82.22:0,82,803	0/0:12,5:17:29.60:0,30,320	0/0:17,0:16:38.61:0,39,455	0/0:22,0:22:50.55:0,51,597	0/0:20,0:19:24.09:0,24,409	1/1:17,0:17:47.55:350,48,0	0/0:16,0:16:23.52:0,24,262	0/0:18,0:18:36.35:0,36,557	0/0:20,0:20:38.20:0,38,414	1/1:12,0:12:35.89:301,36,0	1/1:3,0:3:8.94:67,9,0	0/0:19,0:17:23.57:0,24,236	0/0:15,0:14:23.30:0,23,165	0/0:10,0:8:14.91:0,15,114	0/0:21,0:21:33.45:0,33,330	1/1:16,0:16:32.90:262,33,0	0/0:12,0:12:0:0,0,0	0/0:12,0:12:26.08:0,26,199	0/0:20,0:20:50.30:0,50,435	0/0:21,0:18:29.17:0,29,298	0/0:9,0:9:12.85:0,13,127
chr10	70399801	.	TGAGA	T	1354.62	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=5.090;DP=497;FS=0.000;HRun=0;HaplotypeScore=101.7671;InbreedingCoeff=0.7226;MQ=68.57;MQ0=15;MQRankSum=-0.786;QD=17.59;ReadPosRankSum=-0.744;VQSLOD=3.0120;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:20:18.41:18,0,97	1/1:1,4:5:6.02:89,6,0	0/0:22,0:13:28.55:0,29,539	0/0:33,0:19:29.10:0,29,483	0/0:23,0:19:0.50:0,1,337	0/0:17,0:17:42.13:0,42,730	0/0:31,0:29:56.89:0,57,1185	0/0:32,0:31:84.27:0,84,1573	0/0:17,0:17:33.07:0,33,658	0/0:16,0:15:42.13:0,42,871	0/0:21,0:21:54.18:0,54,1106	0/0:19,0:18:37.99:0,38,869	1/1:11,7:18:51.05:784,51,0	0/0:16,0:16:39.08:0,39,663	0/0:19,0:19:48.15:0,48,1087	0/0:19,0:19:38.33:0,38,785	1/1:13,0:13:8.76:86,9,0	1/1:3,0:3:0.47:1,0,0	0/0:19,0:17:41.42:0,41,565	0/0:15,0:14:24.08:0,24,367	0/0:8,0:7:15.05:0,15,233	0/0:21,0:21:31.78:0,32,645	1/1:12,3:15:33.11:528,33,0	0/0:0,11:11:0:0,0,0	0/0:10,0:10:27.09:0,27,448	0/0:20,0:20:57.06:0,57,951	0/0:22,0:21:56.60:0,57,745	0/0:9,0:9:20.86:0,21,286
chr10	70399995	.	A	AT	2847.92	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-11.933;DP=675;FS=3.851;HRun=7;HaplotypeScore=61.7566;InbreedingCoeff=0.9679;MQ=73.47;MQ0=0;MQRankSum=0.060;QD=27.92;ReadPosRankSum=2.212;VQSLOD=4.5735;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:31:72.22:870,72,0	0/0:12,0:12:36.06:0,36,348	0/0:8,1:10:8.85:0,9,71	0/0:14,0:13:9.12:0,9,112	1/1:4,22:26:66.20:797,66,0	0/0:30,0:30:87.14:0,87,839	0/0:29,0:29:75.08:0,75,712	0/0:31,0:31:78.11:0,78,749	0/0:26,0:26:75.12:0,75,724	0/0:18,0:18:48.07:0,48,463	0/0:18,0:18:51:0,51,475	0/0:41,0:41:99:0,117,1113	0/0:36,0:36:93.14:0,93,897	0/0:31,0:31:84.09:0,84,799	0/0:28,0:28:81.10:0,81,768	0/0:20,0:20:54.09:0,54,521	1/1:2,21:23:54.17:652,54,0	1/1:2,20:22:57.17:689,57,0	0/0:20,0:20:48.05:0,48,459	0/0:29,0:29:80.05:0,80,765	0/0:23,0:23:54.07:0,54,521	0/0:17,0:17:48.07:0,48,460	0/0:21,0:21:60.09:0,60,579	0/0:36,0:36:99:0,108,1043	0/0:15,0:15:39.05:0,39,377	0/0:28,0:28:78.11:0,78,749	0/0:27,0:27:45.95:0,46,562	0/0:13,0:13:36.05:0,36,343
chr10	70401007	.	CTCA	C	135.18	PASS	AB=0.880;AC=4;AF=0.071;AN=56;BaseQRankSum=5.772;DP=744;FS=2.396;HRun=0;HaplotypeScore=142.3400;InbreedingCoeff=-0.0651;MQ=55.37;MQ0=20;MQRankSum=-4.948;QD=2.15;ReadPosRankSum=-2.749;VQSLOD=2.0564;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:47.55:0,48,1188	0/0:8,0:8:24.08:0,24,552	0/0:44,0:13:27.66:0,28,371	0/0:51,1:16:27.32:0,27,557	0/0:19,0:19:32.93:0,33,643	0/0:18,0:18:54.17:0,54,1141	0/0:39,0:39:99:0,114,2427	0/0:26,0:25:75.24:0,75,1546	0/0:39,0:39:99:0,114,2412	0/0:26,0:26:78.27:0,78,1795	0/0:13,0:13:35.50:0,36,710	0/0:41,0:41:99:0,120,2633	0/0:30,0:30:84.26:0,84,1775	0/0:32,0:32:93.28:0,93,1982	0/0:35,0:35:92.35:0,92,2008	0/0:31,0:31:90.27:0,90,1957	0/0:16,0:16:36.01:0,36,663	0/0:19,0:19:40.66:0,41,857	0/1:17,1:18:92.01:92,0,635	0/0:15,0:15:30.10:0,30,690	0/0:40,14:54:85.40:0,85,1872	0/0:20,0:20:57.20:0,57,1263	0/0:11,0:11:33.11:0,33,734	0/0:36,0:34:96.81:0,97,1918	0/0:26,0:24:75.26:0,75,1642	0/1:18,3:21:8.07:8,0,935	0/1:9,7:15:99:130,0,533	0/1:8,0:8:0.82:1,0,456
chr10	70401066	.	CAT	C	50.02	PASS	AB=0.861;AC=6;AF=0.107;AN=56;BaseQRankSum=10.107;DP=775;FS=6.644;HRun=0;HaplotypeScore=143.5331;InbreedingCoeff=-0.1172;MQ=56.36;MQ0=11;MQRankSum=-6.422;QD=0.33;ReadPosRankSum=-4.787;VQSLOD=0.2134;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:19,5:23:89.13:89,0,176	0/1:11,1:12:6.79:7,0,282	0/0:24,0:12:27.09:0,27,541	0/0:28,0:23:37.47:0,37,1133	0/1:12,7:19:20.24:20,0,69	0/0:22,0:22:66.23:0,66,1327	0/0:31,0:31:90.31:0,90,1753	0/0:20,0:18:51.18:0,51,1021	0/0:44,0:44:99:0,132,2612	0/0:29,0:29:87.30:0,87,1733	0/0:15,0:15:34.61:0,35,817	0/0:45,0:44:99:0,132,2585	0/1:41,6:47:23.21:23,0,1179	0/0:30,0:30:90.31:0,90,1822	0/0:39,0:39:99:0,117,2300	0/0:44,0:43:99:0,129,2576	0/0:16,3:19:11.96:0,12,393	0/1:9,2:10:14.44:14,0,127	0/0:23,0:20:57.20:0,57,1122	0/0:19,0:19:45.15:0,45,884	0/0:58,0:58:50.90:0,51,1764	0/0:25,0:24:66.21:0,66,1292	0/0:17,2:18:30.47:0,30,547	0/1:35,2:37:15.88:16,0,892	0/0:28,0:28:73.41:0,73,1591	0/0:35,0:35:69.66:0,70,1709	0/0:23,0:22:55.99:0,56,1093	0/0:4,0:4:12.04:0,12,242
chr10	70401082	.	G	GTCC	1725.11	PASS	AB=0.734;AC=6;AF=0.107;AN=56;BaseQRankSum=7.032;DP=819;FS=1.948;HRun=0;HaplotypeScore=164.8165;InbreedingCoeff=0.6717;MQ=56.40;MQ0=1;MQRankSum=-8.057;QD=22.12;ReadPosRankSum=-4.458;VQSLOD=2.7694;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,7:26:72.66:542,0,73	0/0:17,0:17:29.97:0,30,430	0/0:22,0:15:19.13:0,19,206	0/0:32,0:27:30.02:0,30,422	0/1:9,8:17:2.19:457,0,2	0/0:26,0:26:54.18:0,54,780	0/0:31,0:31:57.48:0,57,900	0/0:23,0:22:19.15:0,19,540	0/0:45,0:45:99:0,116,1608	0/0:34,0:34:87.28:0,87,1220	0/0:19,0:19:43.96:0,44,612	0/0:41,0:41:93.30:0,93,1323	0/0:48,0:48:96.10:0,96,1365	0/0:34,0:34:84.25:0,84,1177	0/0:45,0:45:99:0,120,1669	0/0:46,0:45:99:0,105,1518	1/1:7,15:22:8.23:416,8,0	1/1:9,4:13:25.35:441,25,0	0/0:24,0:24:57.18:0,57,799	0/0:19,0:19:45.15:0,45,650	0/0:59,0:59:99:0,117,1631	0/0:18,0:18:42.14:0,42,608	0/0:18,0:18:30.10:0,30,424	0/0:46,0:46:66.75:0,67,1115	0/0:28,0:28:63.44:0,63,1031	0/0:36,0:36:84.27:0,84,1199	0/0:23,0:23:42.12:0,42,588	0/0:7,0:7:12.04:0,12,173
chr10	70401106	.	G	GTCC	191.95	PASS	AB=0.784;AC=3;AF=0.054;AN=56;BaseQRankSum=6.189;DP=841;FS=3.931;HRun=0;HaplotypeScore=164.7962;InbreedingCoeff=-0.0572;MQ=58.29;MQ0=0;MQRankSum=-6.056;QD=2.53;ReadPosRankSum=-1.149;VQSLOD=2.5566;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:50.02:0,50,894	0/1:9,4:13:51.93:52,0,298	0/0:35,0:27:57.05:0,57,791	0/0:30,0:23:35.40:0,35,631	0/0:18,0:18:32.94:0,33,463	0/0:23,0:23:66.22:0,66,1012	0/0:35,0:35:90.29:0,90,1366	0/0:24,0:24:63.20:0,63,938	0/0:44,0:44:99:0,111,1670	0/0:39,0:39:99:0,102,1488	0/0:17,0:17:49.40:0,49,724	0/0:38,0:38:99:0,105,1580	0/1:37,10:47:99:126,0,1150	0/0:38,0:38:99:0,105,1552	0/0:49,0:49:99:0,135,2081	0/0:39,0:38:99:0,111,1671	0/0:31,0:31:53.41:0,53,730	0/0:20,0:20:49.63:0,50,734	0/0:17,0:17:33.10:0,33,489	0/0:21,0:21:60.17:0,60,871	0/0:58,0:58:99:0,141,2154	0/0:23,0:23:66.07:0,66,957	0/1:11,5:16:99:115,0,248	0/0:33,10:43:81.21:0,81,1235	0/0:30,0:30:81.28:0,81,1249	0/0:34,0:34:84.28:0,84,1299	0/0:24,0:24:69.23:0,69,1060	0/0:5,0:5:15.05:0,15,232
chr10	70401957	.	TAC	T	294.36	PASS	AB=0.894;AC=5;AF=0.093;AN=54;BaseQRankSum=6.228;DP=801;FS=17.492;HRun=0;HaplotypeScore=130.0589;InbreedingCoeff=0.1712;MQ=50.94;MQ0=40;MQRankSum=0.188;QD=2.09;ReadPosRankSum=0.758;VQSLOD=1.2688;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:49,0:48:22.09:25,0,22	0/0:10,0:10:11.99:0,12,157	./.	0/0:26,0:3:2.03:0,2,6	0/1:18,1:18:1.71:12,0,2	0/0:24,0:23:48.35:0,48,608	0/0:38,0:37:70.74:0,71,1029	0/0:34,0:30:63.03:0,63,803	0/0:38,0:38:84.73:0,85,1204	0/0:30,0:30:72.13:0,72,992	0/0:16,0:16:27.09:0,27,402	0/1:30,1:31:6.03:6,0,741	0/0:35,0:35:58.80:0,59,848	0/0:25,0:24:41.66:0,42,580	0/0:31,0:31:54.58:0,55,824	0/0:29,1:30:10.75:0,11,1025	0/1:24,3:27:6.62:257,0,7	0/1:7,8:15:8.02:105,0,8	0/0:20,0:18:24.64:0,25,317	0/0:27,0:27:36.64:0,37,749	0/0:88,0:86:99:0,144,1917	0/0:19,0:19:35.95:0,36,522	0/0:17,0:16:9.02:0,9,116	0/0:45,0:45:29.65:0,30,863	0/0:27,0:27:33.98:0,34,475	0/0:23,0:21:49.27:0,49,577	0/0:16,0:16:44.98:0,45,622	0/0:20,0:20:43.43:0,43,616
chr10	70401961	.	C	CAT	228.40	PASS	AB=0.957;AC=6;AF=0.111;AN=54;BaseQRankSum=8.165;DP=824;FS=0.000;HRun=0;HaplotypeScore=138.7837;InbreedingCoeff=0.2292;MQ=51.17;MQ0=41;MQRankSum=1.655;QD=1.61;ReadPosRankSum=1.128;VQSLOD=2.0798;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:47,3:49:25.73:92,0,26	0/0:10,0:10:2.07:0,2,125	./.	0/1:26,0:3:10.38:16,0,10	1/1:18,1:18:11.76:111,12,0	0/0:24,0:23:60:0,60,732	0/0:38,0:37:70.54:0,71,1114	0/0:35,0:31:89.83:0,90,1075	0/0:40,0:40:99:0,103,1349	0/0:34,0:34:99:0,99,1232	0/0:16,0:16:35.11:0,35,461	0/0:31,0:31:75.08:0,75,962	0/0:35,0:35:64.95:0,65,837	0/0:27,0:26:62.92:0,63,801	0/0:32,0:32:78.60:0,79,1013	0/0:31,0:31:90.17:0,90,1226	0/1:27,2:29:26.38:61,0,26	0/1:17,1:18:22.16:74,0,22	0/0:21,0:19:46.52:0,47,500	0/0:28,0:28:81.14:0,81,1036	0/0:89,0:87:99:0,191,2320	0/0:20,0:20:45.10:0,45,616	0/0:18,0:17:14.74:0,15,131	0/0:45,0:45:68.95:0,69,838	0/0:25,0:25:45.33:0,45,638	0/0:25,0:22:63.03:0,63,791	0/0:18,0:18:51.14:0,51,715	0/0:21,0:21:50.92:0,51,701
chr10	70401968	.	A	AGG	1259.72	PASS	AB=0.744;AC=4;AF=0.074;AN=54;BaseQRankSum=7.591;DP=835;FS=1.277;HRun=0;HaplotypeScore=130.3395;InbreedingCoeff=-0.0406;MQ=52.98;MQ0=42;MQRankSum=-0.574;QD=10.77;ReadPosRankSum=-0.398;VQSLOD=3.3610;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,33:49:17.56:273,0,18	0/0:11,0:11:18.04:0,18,261	./.	0/0:27,1:6:3.44:0,3,78	0/1:8,12:19:16.03:182,0,16	0/0:24,0:24:63.20:0,63,964	0/0:37,0:36:88.95:0,89,1387	0/0:35,0:31:93.30:0,93,1408	0/0:39,0:39:99:0,103,1593	0/0:36,0:34:99:0,99,1535	0/0:16,0:16:36.11:0,36,552	0/0:35,0:35:84.24:0,84,1291	0/0:32,0:32:66.20:0,66,1022	0/0:24,0:23:57.17:0,57,892	0/0:32,0:32:85.17:0,85,1337	0/0:31,0:31:93.25:0,93,1420	0/1:23,6:29:11.97:634,0,12	0/1:17,1:18:78.25:279,0,78	0/0:21,0:18:52.12:0,52,691	0/0:29,0:29:84.25:0,84,1263	0/0:88,0:86:99:0,186,2890	0/0:23,0:23:54.15:0,54,818	0/0:18,0:17:14.78:0,15,217	0/0:44,0:44:75.08:0,75,1164	0/0:27,0:27:62.49:0,62,932	0/0:30,0:27:75.24:0,75,1150	0/0:19,0:19:57.19:0,57,909	0/0:20,0:20:37.99:0,38,760
chr10	70403382	.	AG	A	3080.01	PASS	AB=0.765;AC=53;AF=0.946;AN=56;BaseQRankSum=-1.807;DP=360;FS=23.883;HRun=2;HaplotypeScore=82.0959;InbreedingCoeff=0.5095;MQ=85.54;MQ0=0;MQRankSum=-1.634;QD=8.80;ReadPosRankSum=1.316;VQSLOD=-0.1289;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:33.22:152,33,0	1/1:6,0:6:14.17:48,14,0	0/1:9,4:13:30.18:30,0,163	0/0:10,0:10:14.61:0,15,173	1/1:13,0:13:16:67,16,0	1/1:15,0:15:33.28:113,33,0	1/1:10,0:10:25.91:124,26,0	1/1:16,0:16:46.26:297,46,0	1/1:16,0:16:23.55:143,24,0	1/1:7,0:7:17.97:112,18,0	1/1:12,0:12:1.35:37,1,0	1/1:13,0:13:27.83:110,28,0	1/1:20,0:20:42.64:161,43,0	1/1:13,0:13:30.82:137,31,0	1/1:8,0:8:20.02:73,20,0	1/1:6,0:6:15.36:58,15,0	1/1:13,0:13:22.03:115,22,0	1/1:17,0:17:38.33:136,38,0	1/1:6,0:6:14.08:68,14,0	1/1:17,0:17:27.46:110,27,0	1/1:16,0:16:31.70:113,32,0	1/1:15,0:15:36.33:189,36,0	1/1:11,0:11:25.84:129,26,0	1/1:10,0:9:23.94:108,24,0	1/1:16,0:16:40.84:153,41,0	1/1:14,0:14:36.83:200,37,0	1/1:14,0:14:33.08:141,33,0	1/1:13,0:13:21.03:71,21,0
chr10	70403970	.	GT	G	2756.49	PASS	AB=0.814;AC=29;AF=0.518;AN=56;BaseQRankSum=11.193;DP=564;FS=5.927;HRun=13;HaplotypeScore=104.5856;InbreedingCoeff=0.5621;MQ=74.13;MQ0=2;MQRankSum=-0.261;QD=8.25;ReadPosRankSum=3.875;VQSLOD=2.8736;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:35:30.54:114,31,0	0/1:6,1:8:19.64:20,0,132	0/0:41,1:26:4.15:0,4,189	0/0:35,1:21:26.22:0,26,191	1/1:2,2:22:35.70:129,36,0	0/0:13,1:15:16.97:0,17,304	0/1:9,2:11:47.41:47,0,70	1/1:13,13:25:35.70:262,36,0	0/0:15,2:18:1.16:0,1,316	0/1:19,2:22:1.16:1,0,310	0/0:18,1:20:19.97:0,20,330	0/0:15,0:15:14.39:0,14,283	1/1:11,15:26:52.60:458,53,0	0/0:21,0:21:41.95:0,42,456	0/0:21,2:24:26.67:0,27,551	0/0:11,0:12:14.45:0,14,239	1/1:3,0:20:34.41:99,34,0	1/1:3,0:7:4.52:13,5,0	0/1:12,6:18:33.58:106,0,34	1/1:4,11:16:22.85:159,23,0	1/1:5,11:16:26.78:196,27,0	0/0:10,0:10:8.25:0,8,236	1/1:9,10:19:13.70:239,14,0	1/1:5,16:22:37.43:268,37,0	0/0:11,1:14:10.94:0,11,245	0/1:11,10:22:14.50:219,0,15	1/1:7,17:29:69.81:437,70,0	1/1:4,10:15:4.05:193,4,0
chr10	70404195	.	A	AACAC	2505.28	PASS	AB=0.951;AC=23;AF=0.426;AN=54;BaseQRankSum=1.853;DP=472;FS=4.704;HRun=0;HaplotypeScore=134.8164;InbreedingCoeff=0.4494;MQ=59.83;MQ0=10;MQRankSum=-5.414;QD=8.67;ReadPosRankSum=0.198;VQSLOD=2.8801;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:32:22.14:68,0,22	0/0:2,0:3:6.01:0,6,75	1/1:32,0:14:0.47:1,0,0	./.	0/1:11,0:13:0.09:2,0,0	0/0:15,0:17:20.80:0,21,290	0/0:17,0:20:27.07:0,27,343	0/1:38,0:38:34.80:80,0,35	0/0:9,0:9:9.02:0,9,122	0/0:14,0:13:11.03:0,11,174	0/0:6,0:6:9.03:0,9,140	0/0:9,0:8:15.04:0,15,212	0/1:12,0:12:14.85:82,0,15	0/0:14,0:13:3.01:0,3,47	0/0:16,0:15:6.02:0,6,94	0/0:11,0:10:20.93:0,21,273	1/1:16,0:16:19.47:238,19,0	1/1:16,0:16:9.02:144,9,0	1/1:14,0:14:12.04:184,12,0	1/1:21,4:28:32.68:602,33,0	1/1:12,1:11:3.01:71,3,0	0/0:10,0:10:3.01:0,3,47	0/0:17,0:15:3.60:0,4,19	0/1:18,0:18:15.65:92,0,16	0/0:3,0:4:3:0,3,28	1/1:10,6:17:20.53:312,21,0	1/1:23,7:30:32.13:572,32,0	1/1:6,2:9:9.03:235,9,0
chr10	70404238	.	TA	T	757.66	PASS	AB=0.800;AC=17;AF=0.304;AN=56;BaseQRankSum=4.648;DP=295;FS=0.000;HRun=9;HaplotypeScore=48.6212;InbreedingCoeff=0.7267;MQ=56.09;MQ0=15;MQRankSum=-6.667;QD=10.38;ReadPosRankSum=3.247;VQSLOD=1.6554;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:12.82:0,13,83	0/0:2,0:2:3.01:0,3,34	0/0:31,0:17:39.29:0,39,473	0/0:16,0:9:24.03:0,24,270	0/0:8,0:6:4.68:0,5,24	0/0:16,0:16:42.60:0,43,486	0/0:20,0:20:51.11:0,51,573	1/1:2,8:10:18:165,18,0	0/0:9,0:9:21.05:0,21,234	0/0:19,0:19:54.15:0,54,611	0/0:10,0:9:21.06:0,21,242	0/0:12,0:12:27.07:0,27,304	1/1:1,6:7:4.48:51,4,0	0/0:11,0:11:26.04:0,26,242	0/0:7,0:7:15.04:0,15,173	0/0:16,0:15:36.09:0,36,399	0/0:8,0:7:9.03:0,9,104	0/0:10,0:10:18.05:0,18,208	1/1:4,5:7:15.01:137,15,0	1/1:4,9:13:13.25:134,13,0	0/0:4,1:3:0.47:0,0,1	0/0:6,0:6:18.05:0,18,208	1/1:3,5:5:2.11:26,2,0	0/0:3,3:6:0:0,0,1	0/1:3,1:4:18.44:18,0,60	1/1:1,4:5:12:110,12,0	1/1:2,11:13:23.67:219,24,0	1/1:1,3:4:9:82,9,0
chr10	70404440	.	AT	A	2835.83	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.575;DP=471;FS=18.343;HRun=1;HaplotypeScore=55.1832;InbreedingCoeff=0.9968;MQ=77.03;MQ0=0;MQRankSum=-2.206;QD=34.17;ReadPosRankSum=1.717;VQSLOD=1.9323;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:63.20:817,63,0	0/0:8,0:8:24.08:0,24,382	0/0:15,0:15:42.08:0,42,620	0/0:8,0:8:24.08:0,24,367	1/1:0,26:26:78.25:1012,78,0	0/0:13,0:12:39.13:0,39,619	0/0:13,0:13:36.12:0,36,575	0/0:31,0:31:90.30:0,90,1411	0/0:14,0:14:42.14:0,42,669	0/0:24,0:24:72.25:0,72,1151	0/0:18,0:18:54.18:0,54,838	0/0:14,0:14:42.14:0,42,668	0/0:25,0:25:69.21:0,69,1056	0/0:16,0:16:45.15:0,45,719	0/0:13,0:13:36.12:0,36,576	0/0:8,0:8:24.08:0,24,384	1/1:0,12:12:30.10:388,30,0	1/1:0,20:20:60.20:779,60,0	0/0:11,0:11:33.11:0,33,528	0/0:22,0:22:66.22:0,66,1043	0/0:15,0:15:45.15:0,45,716	0/0:13,0:13:39.13:0,39,623	0/0:24,0:24:66.22:0,66,1044	0/0:16,0:16:45.14:0,45,696	0/0:13,0:13:39.13:0,39,622	0/0:20,0:20:60.16:0,60,931	0/0:27,0:27:81.27:0,81,1280	0/0:7,0:7:21.03:0,21,308
chr10	70405141	.	C	CTT	7868.11	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-9.072;DP=491;FS=13.641;HRun=9;HaplotypeScore=61.7332;InbreedingCoeff=0.9742;MQ=79.21;MQ0=0;MQRankSum=-2.126;QD=32.78;ReadPosRankSum=1.104;VQSLOD=3.5844;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:45.15:693,45,0	0/0:3,0:3:9.02:0,9,96	0/0:15,0:14:24.03:0,24,249	0/0:11,0:12:19.74:0,20,188	1/1:8,21:29:57.19:877,57,0	0/0:25,0:25:72.16:0,72,758	0/0:11,0:11:33.07:0,33,343	1/1:7,18:27:59.16:817,59,0	0/0:10,0:10:27.06:0,27,287	0/0:17,0:17:42.07:0,42,447	0/0:14,0:14:33.07:0,33,348	0/0:15,0:15:45.11:0,45,479	0/0:19,0:19:57.14:0,57,607	0/0:14,0:14:39.10:0,39,415	0/0:25,0:25:72.07:0,72,743	0/0:18,0:18:48.11:0,48,510	1/1:6,27:33:66.22:1016,66,0	1/1:5,9:15:23.57:332,24,0	1/1:5,16:22:50.66:746,51,0	1/1:0,18:20:56.60:781,57,0	1/1:2,3:5:6.02:92,6,0	0/0:15,0:15:42.10:0,42,447	0/0:12,0:12:27.02:0,27,278	0/0:7,0:7:21.04:0,21,215	0/0:19,0:19:45.07:0,45,472	1/1:2,14:18:47.11:640,47,0	1/1:6,32:42:92.40:1366,92,0	1/1:0,12:12:33.11:508,33,0
chr10	70405973	.	GCT	G	50.44	PASS	AB=0.896;AC=6;AF=0.136;AN=44;BaseQRankSum=1.800;DP=641;FS=13.503;HRun=0;HaplotypeScore=85.1510;InbreedingCoeff=0.1695;MQ=70.39;MQ0=21;MQRankSum=1.800;QD=0.75;ReadPosRankSum=2.292;VQSLOD=0.8099;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:6.01:0,6,64	0/0:10,0:10:3.01:0,3,36	./.	./.	./.	0/0:33,0:32:3.88:0,4,27	0/0:18,0:18:2.99:0,3,24	./.	0/0:14,0:14:2.75:0,3,28	0/0:26,0:26:11.99:0,12,115	0/0:11,0:11:2.76:0,3,39	0/0:18,0:18:11.99:0,12,112	1/1:9,3:14:8.69:60,9,0	0/0:15,0:15:5.71:0,6,57	0/0:16,0:19:6:0,6,51	0/0:19,0:19:5.90:0,6,41	0/0:21,0:20:14.96:0,15,132	0/0:14,0:14:12.02:0,12,151	./.	0/0:16,0:16:3.01:0,3,39	0/0:20,0:19:3.01:0,3,38	0/0:21,0:21:2.73:0,3,24	1/1:17,1:18:3.01:32,3,0	0/1:18,1:20:30.80:31,0,91	0/0:22,0:22:8.99:0,9,76	0/0:24,0:24:1.77:0,2,3	0/1:13,1:14:11.09:37,0,11	./.
chr10	70408655	.	A	AG	18071.31	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=7.134;DP=873;FS=0.782;HRun=1;HaplotypeScore=107.0599;InbreedingCoeff=0.9999;MQ=86.31;MQ0=0;MQRankSum=-5.905;QD=41.54;ReadPosRankSum=2.667;VQSLOD=4.7388;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,56:56:99:2237,153,0	0/0:23,0:23:69.21:0,69,880	0/0:32,0:32:84.26:0,84,1061	0/0:37,0:37:95.14:0,95,1142	1/1:1,14:15:42.07:594,42,0	0/0:26,0:26:78.25:0,78,1012	0/0:28,0:28:84.26:0,84,1076	1/1:0,35:35:99:1525,105,0	0/0:31,0:31:93.29:0,93,1191	0/0:37,0:37:99:0,108,1393	0/0:11,0:11:33.11:0,33,428	0/0:37,0:37:99:0,108,1370	1/1:0,39:39:99:1659,111,0	0/0:45,0:45:99:0,135,1704	0/0:46,0:46:99:0,135,1740	0/0:34,0:33:99:0,102,1305	1/1:1,30:31:87.29:1298,87,0	1/1:0,29:29:84.28:1258,84,0	1/1:1,18:19:54.18:807,54,0	1/1:0,23:23:69.23:1034,69,0	1/1:1,66:67:99:2651,177,0	0/0:27,0:27:81.13:0,81,1000	1/1:0,13:13:33.11:494,33,0	1/1:1,27:28:75.25:1113,75,0	0/0:24,0:24:72.20:0,72,893	1/1:2,30:32:90.30:1348,90,0	1/1:0,32:31:90.30:1334,90,0	1/1:0,16:16:48.16:719,48,0
chr10	70408797	.	GTGATGGA	G	14470.01	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=18.840;DP=710;FS=0.313;HRun=0;HaplotypeScore=192.2731;InbreedingCoeff=0.9896;MQ=84.72;MQ0=0;MQRankSum=-16.167;QD=44.52;ReadPosRankSum=0.519;VQSLOD=4.6091;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,33:39:50.99:1104,51,0	0/0:12,0:12:36.12:0,36,1303	0/0:26,0:26:63.22:0,63,2186	0/0:27,0:27:75.26:0,75,2348	1/1:3,23:26:35.71:784,36,0	0/0:19,0:19:57.20:0,57,2134	0/0:34,0:34:99:0,102,3808	1/1:3,18:21:51.09:1001,51,0	0/0:21,0:21:63.19:0,63,2327	0/0:20,0:20:57.20:0,57,2268	0/0:13,0:13:39.13:0,39,1444	0/0:32,0:32:96.32:0,96,3239	1/1:2,30:32:78.27:2003,78,0	0/0:42,0:42:99:0,123,4508	0/0:44,0:44:99:0,126,4698	0/0:28,0:28:75.26:0,75,2862	1/1:5,21:26:42.14:1105,42,0	1/1:1,15:16:30.10:788,30,0	1/1:1,16:17:48.14:1002,48,0	1/1:1,16:17:42.06:986,42,0	1/1:5,24:29:11.29:314,11,0	0/0:31,0:31:93.32:0,93,3479	1/1:0,14:14:39.13:1025,39,0	1/1:6,13:19:18.06:474,18,0	0/0:36,0:36:99:0,105,3956	1/1:3,22:25:69.20:1597,69,0	1/1:0,37:37:81.22:1971,81,0	1/1:2,5:7:12.04:316,12,0
chr10	70409544	.	T	TTCTCG	27975.59	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-14.075;DP=753;FS=2.830;HRun=0;HaplotypeScore=131.0996;InbreedingCoeff=0.9988;MQ=85.81;MQ0=1;MQRankSum=-7.442;QD=67.41;ReadPosRankSum=2.815;VQSLOD=6.1719;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,47:57:99:3777,123,0	0/0:7,0:7:18.06:0,18,377	0/0:28,0:28:69.23:0,69,1339	0/0:27,0:27:63.18:0,63,1281	1/1:4,22:26:45.15:1382,45,0	0/0:21,0:21:60.21:0,60,1247	0/0:29,0:29:78.24:0,78,1526	1/1:12,14:28:63.19:1673,63,0	0/0:30,0:30:84.22:0,84,1561	0/0:31,0:31:90.29:0,90,1774	0/0:20,0:20:57.20:0,57,1179	0/0:26,0:26:75.26:0,75,1575	1/1:5,23:29:78.27:2354,78,0	0/0:27,0:27:78.24:0,78,1549	0/0:29,0:28:84.27:0,84,1725	0/0:28,0:28:84.27:0,84,1714	1/1:5,19:28:63.22:1928,63,0	1/1:4,25:30:72.25:2212,72,0	1/1:10,19:30:75.24:2108,75,0	1/1:5,17:22:48.16:1485,48,0	1/1:4,30:37:72.25:2203,72,0	0/0:17,0:17:51.18:0,51,1069	1/1:3,15:18:36.12:1093,36,0	1/1:4,33:38:78.27:2387,78,0	0/0:18,0:18:51.16:0,51,1028	1/1:7,22:29:78.23:2144,78,0	1/1:3,24:26:72.25:2208,72,0	1/1:1,14:14:33.11:1023,33,0
chr10	70411707	.	GCAAA	G	2936.88	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.489;DP=775;FS=1.085;HRun=0;HaplotypeScore=125.7840;InbreedingCoeff=0.9792;MQ=84.16;MQ0=0;MQRankSum=-3.990;QD=41.96;ReadPosRankSum=2.303;VQSLOD=3.7953;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,169,4470	0/0:9,0:9:27.08:0,27,664	0/0:18,0:18:45.15:0,45,1156	0/0:31,0:30:75.22:0,75,1724	0/0:33,0:33:87.30:0,87,2192	0/0:27,0:27:81.28:0,81,2150	0/0:27,0:27:78.25:0,78,2018	0/0:38,0:38:99:0,105,2793	0/0:19,0:19:57.18:0,57,1465	0/0:41,0:41:99:0,114,2996	0/0:28,0:28:75.26:0,75,2001	0/0:23,0:23:63.22:0,63,1681	1/1:2,16:18:45.15:840,45,0	0/0:28,0:28:84.29:0,84,2226	0/0:34,0:34:93.32:0,93,2438	0/0:27,0:27:78.27:0,78,2071	0/0:26,0:26:75.26:0,75,2001	0/0:28,0:28:81.26:0,81,2088	0/0:22,0:22:60.21:0,60,1527	0/0:33,0:33:87.30:0,87,2280	0/0:37,0:37:96.33:0,96,2561	0/0:25,0:25:75.26:0,75,2000	1/1:1,23:24:54.06:1007,54,0	1/1:1,27:28:66.70:1233,67,0	0/0:30,0:30:81.28:0,81,2133	0/0:34,0:34:93.32:0,93,2481	0/0:23,0:22:66.23:0,66,1758	0/0:3,0:3:9.03:0,9,240
chr10	70411990	.	GAAC	G	16492.17	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=15.938;DP=696;FS=6.219;HRun=0;HaplotypeScore=104.2341;InbreedingCoeff=0.9964;MQ=92.62;MQ0=1;MQRankSum=-5.087;QD=45.31;ReadPosRankSum=2.226;VQSLOD=6.7644;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,43:45:99:2006,114,0	0/0:5,0:5:15.05:0,15,355	0/0:30,0:30:87.30:0,87,1951	0/0:32,0:32:93.25:0,93,2040	1/1:0,32:32:84.29:1480,84,0	0/0:15,0:15:45.15:0,45,1059	0/0:21,0:21:63.21:0,63,1421	1/1:0,33:33:99:1714,99,0	0/0:23,0:23:69.23:0,69,1565	0/0:41,0:41:99:0,123,2850	0/0:30,0:30:87.28:0,87,1985	0/0:25,0:25:72.25:0,72,1657	1/1:0,23:23:60.21:1055,60,0	0/0:17,0:17:51.18:0,51,1204	0/0:27,0:27:81.26:0,81,1804	0/0:21,0:21:63.22:0,63,1468	1/1:1,25:26:63.22:1110,63,0	1/1:0,22:22:63.22:1110,63,0	1/1:0,12:12:36.11:607,36,0	1/1:0,17:17:51.17:899,51,0	1/1:2,34:35:81.28:1425,81,0	0/0:31,0:31:90.31:0,90,2041	1/1:0,24:24:63.22:1108,63,0	1/1:0,32:32:81.28:1428,81,0	0/0:14,0:14:42.14:0,42,993	1/1:1,30:31:19.21:1287,19,0	1/1:0,21:21:51.17:892,51,0	1/1:0,10:10:21.07:370,21,0
chr10	70412206	.	CCA	C	15251.16	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=18.843;DP=714;FS=2.280;HRun=0;HaplotypeScore=105.0565;InbreedingCoeff=0.9998;MQ=83.24;MQ0=2;MQRankSum=-5.068;QD=41.00;ReadPosRankSum=1.751;VQSLOD=6.3172;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:78.26:1148,78,0	0/0:17,0:17:51.17:0,51,933	0/0:27,0:27:69.21:0,69,1190	0/0:22,0:22:66.22:0,66,1191	1/1:0,35:35:96.32:1413,96,0	0/0:28,0:28:84.29:0,84,1573	0/0:29,0:29:81.24:0,81,1444	1/1:0,35:35:99:1505,105,0	0/0:25,0:24:75.20:0,75,1289	0/0:29,0:29:87.30:0,87,1619	0/0:31,0:31:93.32:0,93,1741	0/0:22,0:22:66.23:0,66,1236	1/1:1,27:28:81.27:1192,81,0	0/0:18,0:18:54.17:0,54,968	0/0:20,0:20:60.21:0,60,1113	0/0:24,0:24:66.23:0,66,1236	1/1:0,24:24:66.22:972,66,0	1/1:1,30:30:81.27:1192,81,0	1/1:2,24:26:75.25:1101,75,0	1/1:2,24:26:75.25:1096,75,0	1/1:0,11:11:27.09:397,27,0	0/0:26,0:26:78.27:0,78,1452	1/1:1,30:31:90.30:1324,90,0	1/1:1,20:21:51.17:750,51,0	0/0:24,0:24:72.25:0,72,1338	1/1:1,28:29:84.27:1218,84,0	1/1:2,35:36:99:1500,102,0	1/1:0,10:10:30.10:442,30,0
chr10	70412257	.	G	GT	3781.97	PASS	AB=0.737;AC=17;AF=0.304;AN=56;BaseQRankSum=5.656;DP=680;FS=10.986;HRun=7;HaplotypeScore=153.0331;InbreedingCoeff=0.7498;MQ=69.66;MQ0=0;MQRankSum=-8.759;QD=15.19;ReadPosRankSum=-1.746;VQSLOD=1.8457;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:39:92.93:0,93,881	0/0:13,0:13:36.05:0,36,348	0/0:27,0:24:38.90:0,39,422	0/0:21,0:17:28.83:0,29,258	0/0:36,0:36:96.14:0,96,924	0/0:29,0:29:84.13:0,84,811	0/0:24,0:24:57.08:0,57,549	1/1:31,16:47:77.09:889,77,0	0/0:14,0:14:33.03:0,33,312	0/0:30,0:30:78.09:0,78,739	0/0:26,0:26:72.11:0,72,695	0/0:15,0:15:33.70:0,34,355	0/1:18,11:29:40.52:478,0,41	0/0:16,0:16:45.07:0,45,434	0/0:16,0:16:48.08:0,48,463	0/0:28,0:28:84.14:0,84,811	0/0:30,0:31:80.09:0,80,738	0/0:26,0:26:41.63:0,42,573	1/1:18,5:23:37.72:467,38,0	1/1:18,8:26:40.80:483,41,0	1/1:8,4:12:14.81:179,15,0	0/0:24,0:24:63.10:0,63,608	0/1:19,16:34:1.76:595,0,2	0/1:15,5:20:11.80:187,0,12	0/0:16,0:16:42.05:0,42,399	1/1:18,2:20:13.10:161,13,0	1/1:25,6:31:23.99:307,24,0	1/1:5,1:6:2.83:36,3,0
chr10	70412261	.	T	TTTTTGTTTGTTTGTTTG	9456.08	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=0.713;DP=660;FS=13.061;HRun=0;HaplotypeScore=346.7358;InbreedingCoeff=0.3470;MQ=65.93;MQ0=2;MQRankSum=-8.283;QD=35.82;ReadPosRankSum=-5.994;VQSLOD=1.9667;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:15:0,15,2324	0/0:14,0:14:39.08:0,39,1109	0/0:25,0:21:42.07:0,42,1090	0/0:22,0:18:38.69:0,39,337	0/0:36,0:36:62.30:0,62,2974	0/0:30,0:30:90.13:0,90,2442	0/0:21,0:21:21.53:0,22,1808	0/1:42,0:42:99:769,0,729	0/0:12,0:12:33.10:0,33,1058	0/0:28,0:28:81.21:0,81,2404	0/0:26,0:26:75.21:0,75,2338	0/0:15,0:15:45.02:0,45,1332	1/1:25,2:27:75.21:2496,75,0	0/0:16,0:16:45.13:0,45,1412	0/0:18,0:18:51.14:0,51,1757	0/0:29,0:29:87.25:0,87,3303	0/0:31,0:31:77.62:0,78,2115	0/1:25,0:25:14.08:14,0,1502	0/1:25,0:24:99:401,0,926	0/1:25,0:25:99:420,0,657	1/1:10,0:10:8.20:203,8,0	0/0:23,0:23:66.16:0,66,1655	1/1:30,4:33:93.08:3119,93,0	1/1:18,2:20:45.11:1672,45,0	0/0:14,0:14:42.11:0,42,1310	0/1:19,0:19:99:111,0,962	0/1:31,0:31:99:225,0,1834	0/1:6,0:6:27:27,0,125
chr10	70412262	.	TTTGTTTG	T	8310.41	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=4.712;DP=658;FS=8.514;HRun=0;HaplotypeScore=196.4766;InbreedingCoeff=0.7347;MQ=65.28;MQ0=2;MQRankSum=-10.371;QD=35.07;ReadPosRankSum=-3.027;VQSLOD=3.1900;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.41:0,96,3186	0/0:14,0:14:39.11:0,39,1119	0/0:24,0:20:42.19:0,42,1214	0/0:23,0:19:43.89:0,44,800	0/0:36,0:36:99:0,102,3131	0/0:30,0:30:90.25:0,90,2521	0/0:20,0:20:57.18:0,57,1877	1/1:26,14:40:99:2017,120,0	0/0:11,0:11:33.10:0,33,1101	0/0:28,0:28:81.22:0,81,2288	0/0:26,0:26:75.24:0,75,2535	0/0:15,0:15:45.14:0,45,1390	0/1:27,0:27:99:124,0,1407	0/0:16,0:16:45.13:0,45,1315	0/0:18,0:18:54.17:0,54,1736	0/0:29,0:29:87.28:0,87,3030	0/0:32,0:32:87.23:0,87,2474	0/0:26,0:26:71.85:0,72,2205	1/1:6,19:24:72.20:1208,72,0	1/1:10,14:24:69.18:1236,69,0	1/1:4,5:9:17.98:278,18,0	0/0:23,0:23:66.20:0,66,1892	0/1:35,0:34:99:180,0,1554	0/1:21,0:21:75.81:76,0,737	0/0:14,0:14:42.12:0,42,1198	1/1:5,14:19:51.17:1161,51,0	1/1:7,24:31:84.28:1842,84,0	1/1:5,1:6:9.03:189,9,0
chr10	70412595	.	A	AG	10517.13	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=1.350;DP=588;FS=6.107;HRun=3;HaplotypeScore=102.2895;InbreedingCoeff=0.9855;MQ=96.56;MQ0=0;MQRankSum=-10.093;QD=37.03;ReadPosRankSum=2.589;VQSLOD=4.7428;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:36:99:1365,99,0	0/0:11,0:11:33.10:0,33,390	0/0:33,0:33:93.27:0,93,1096	0/0:29,0:29:74.69:0,75,852	1/1:2,25:27:66.21:908,66,0	0/0:13,0:13:39.12:0,39,468	0/0:17,0:17:51.16:0,51,612	1/1:0,18:18:54.18:755,54,0	0/0:23,0:23:63.18:0,63,744	0/0:17,0:17:48.15:0,48,576	0/0:21,0:21:60.18:0,60,720	0/0:25,0:25:75.23:0,75,900	1/1:3,28:31:84.28:1176,84,0	0/0:13,0:13:39.10:0,39,456	0/0:35,0:35:99:0,105,1260	0/0:25,0:25:72.22:0,72,863	1/1:0,28:28:81.27:1134,81,0	1/1:1,13:14:36.12:504,36,0	1/1:2,12:13:36.12:499,36,0	1/1:1,14:15:33.11:446,33,0	1/1:0,15:15:39.07:514,39,0	0/0:21,0:21:63.19:0,63,756	1/1:0,19:19:45.15:629,45,0	1/1:2,29:31:51.29:1140,51,0	0/0:21,0:21:57.17:0,57,684	1/1:0,11:11:33.08:440,33,0	1/1:0,23:23:66.22:922,66,0	1/1:0,2:2:6.02:84,6,0
chr10	70412605	.	CCAGTAAAGTACTTGCTA	C	8039.60	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.074;DP=591;FS=1.752;HRun=0;HaplotypeScore=302.9784;InbreedingCoeff=0.9611;MQ=88.77;MQ0=0;MQRankSum=-11.757;QD=99.25;ReadPosRankSum=2.741;VQSLOD=4.4337;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.33:0,96,7227	0/0:14,0:14:42.14:0,42,3277	0/0:29,0:29:81.28:0,81,4626	0/0:25,0:25:72.18:0,72,4053	0/0:27,0:27:81.28:0,81,6571	0/0:14,0:14:42.14:0,42,3412	0/0:21,0:21:63.22:0,63,5064	1/1:13,4:17:15.04:623,15,0	0/0:22,0:22:66.23:0,66,5506	0/0:20,0:20:60.21:0,60,4710	0/0:20,0:20:54.18:0,54,3977	0/0:27,0:27:78.27:0,78,6280	0/0:29,0:29:87.30:0,87,6282	0/0:16,0:16:48.16:0,48,3518	0/0:42,0:42:99:0,126,9906	0/0:24,0:24:69.24:0,69,5619	0/0:30,0:30:84.29:0,84,6451	0/0:19,0:19:57.20:0,57,4634	1/1:4,5:8:15.05:745,15,0	1/1:2,7:9:24.07:1040,24,0	1/1:2,12:14:33.09:1470,33,0	0/0:22,0:22:63.22:0,63,4864	0/0:18,0:18:51.18:0,51,4063	0/0:33,0:33:93.32:0,93,6761	0/0:24,0:24:72.25:0,72,5750	1/1:1,9:10:27.09:1341,27,0	1/1:2,18:20:54.19:2672,54,0	1/1:1,1:2:3.01:149,3,0
chr10	70413034	.	CAG	C	167.56	PASS	AB=0.904;AC=8;AF=0.160;AN=50;BaseQRankSum=1.774;DP=485;FS=7.750;HRun=0;HaplotypeScore=72.6912;InbreedingCoeff=0.0606;MQ=63.68;MQ0=8;MQRankSum=-0.296;QD=1.15;ReadPosRankSum=0.680;VQSLOD=0.5564;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:17:8.96:0,9,106	0/0:4,0:4:2.99:0,3,23	./.	./.	0/0:14,0:14:15.03:0,15,177	0/0:14,0:14:6:0,6,67	0/1:23,5:29:78.60:79,0,232	0/0:17,0:16:8.86:0,9,75	0/0:21,0:20:21.92:0,22,271	0/0:14,0:14:3.01:0,3,45	0/0:8,0:8:9:0,9,93	0/1:14,3:17:20.46:20,0,122	0/0:14,0:14:6.01:0,6,56	0/1:20,1:22:45.70:46,0,155	0/1:23,3:26:40.99:41,0,240	0/1:25,1:27:19.40:19,0,221	0/0:19,0:22:18.40:0,18,176	0/0:17,0:18:9.80:0,10,90	0/1:7,0:7:1.26:19,0,1	0/0:10,0:10:0:0,0,0	0/0:21,0:21:15.01:0,15,153	0/0:9,0:9:8.70:0,9,95	0/0:10,0:10:3:0,3,26	0/0:31,0:33:50.18:0,50,505	0/0:12,0:12:2.59:0,3,24	0/0:17,0:17:21.02:0,21,208	1/1:16,1:18:8.84:70,9,0	./.
chr10	70415271	.	TAC	T	1112.67	PASS	AB=0.939;AC=29;AF=0.580;AN=50;BaseQRankSum=5.999;DP=711;FS=3.989;HRun=0;HaplotypeScore=113.2051;InbreedingCoeff=0.4737;MQ=57.55;MQ0=8;MQRankSum=0.075;QD=3.37;ReadPosRankSum=2.800;VQSLOD=1.9963;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:37:5.63:0,6,52	1/1:9,2:11:3.01:33,3,0	./.	./.	0/0:15,0:26:11.04:0,11,100	0/0:21,0:21:21.35:0,21,273	0/1:43,3:46:50.66:51,0,492	0/0:16,0:17:2.84:0,3,14	0/1:31,1:32:2.74:3,0,353	1/1:15,5:21:11.83:112,12,0	1/1:8,1:11:5.85:47,6,0	0/0:31,1:33:0.78:0,1,397	1/1:14,3:17:3.01:33,3,0	0/0:24,1:25:12.24:0,12,499	1/1:12,13:27:17.47:159,17,0	0/0:21,0:24:1.79:0,2,309	0/0:13,1:31:5.73:0,6,308	0/0:12,0:28:18.32:0,18,165	1/1:8,0:11:2.84:14,3,0	1/1:11,0:15:3.73:16,4,0	./.	0/1:18,2:20:23.98:24,0,48	1/1:8,1:8:11.70:94,12,0	1/1:19,16:35:33.08:359,33,0	1/1:11,13:26:20.72:192,21,0	1/1:11,0:24:12.25:58,12,0	1/1:12,0:19:16.58:78,17,0	1/1:3,0:5:2.04:6,2,0
chr10	70417441	.	GCGCA	G	1762.45	PASS	AB=0.913;AC=27;AF=0.482;AN=56;BaseQRankSum=11.844;DP=414;FS=6.930;HRun=0;HaplotypeScore=134.8815;InbreedingCoeff=0.7230;MQ=63.01;MQ0=3;MQRankSum=-10.782;QD=8.01;ReadPosRankSum=4.446;VQSLOD=1.6031;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:8.39:72,8,0	0/0:9,0:9:24.03:0,24,443	0/0:5,0:4:5.91:0,6,39	0/1:17,0:11:7.35:7,0,106	1/1:18,0:18:9.02:100,9,0	0/0:13,0:13:35.93:0,36,825	0/0:27,0:27:81.19:0,81,1728	1/1:12,0:12:15.49:126,15,0	0/0:5,0:5:15.01:0,15,237	0/0:28,0:28:78.24:0,78,1742	0/0:19,0:19:54.06:0,54,1179	0/0:16,0:16:16.28:0,16,652	1/1:11,0:11:6.51:60,7,0	0/0:13,0:13:36.11:0,36,808	0/0:9,0:9:17.99:0,18,205	0/0:8,0:8:21.06:0,21,496	1/1:27,0:27:9.56:107,10,0	1/1:10,0:10:8.29:70,8,0	1/1:7,1:7:6.08:64,6,0	1/1:4,5:9:15.05:237,15,0	0/1:13,1:14:0:0,0,0	0/0:16,0:16:48.14:0,48,1114	1/1:14,0:14:6.02:66,6,0	1/1:8,0:8:4.44:37,4,0	0/0:26,0:25:69.17:0,69,1550	0/1:19,6:25:84.26:438,0,84	1/1:4,5:9:17.38:250,17,0	1/1:9,5:14:30.83:333,31,0
chr10	70417443	.	GCACGCGCGCGCA	G	4258.83	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=11.568;DP=449;FS=2.319;HRun=0;HaplotypeScore=194.4179;InbreedingCoeff=0.5989;MQ=56.98;MQ0=4;MQRankSum=-11.228;QD=16.64;ReadPosRankSum=5.498;VQSLOD=3.8036;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,3:25:9.03:267,9,0	0/0:9,0:9:24.05:0,24,848	0/0:4,0:2:5.66:0,6,33	0/0:16,0:10:12.07:0,12,199	1/1:9,8:23:12:364,12,0	0/0:13,0:13:35.70:0,36,1481	0/0:27,0:27:81.21:0,81,3281	0/1:13,0:13:23.78:24,0,27	0/0:5,0:5:15.01:0,15,449	0/0:27,0:27:78.23:0,78,3380	0/0:20,0:20:57.07:0,57,2387	0/1:16,0:16:36.58:37,0,996	1/1:7,1:12:12.04:266,12,0	0/0:13,0:13:36.09:0,36,1573	0/0:9,0:9:17.99:0,18,208	0/0:8,0:8:21.06:0,21,716	1/1:5,21:29:21.54:509,22,0	1/1:9,1:15:16.03:377,16,0	0/1:12,0:11:52.63:72,0,53	1/1:11,0:11:15:357,15,0	0/1:21,0:21:0:0,0,0	0/0:16,0:16:48.14:0,48,2266	1/1:6,3:16:6.02:229,6,0	1/1:4,3:10:5.87:160,6,0	0/0:26,0:25:72.18:0,72,3433	0/1:27,0:27:99:625,0,255	1/1:11,0:11:12.77:427,13,0	1/1:15,0:15:8.63:545,9,0
chr10	70417448	.	C	CGA	289.19	PASS	AB=0.844;AC=13;AF=0.232;AN=56;BaseQRankSum=5.045;DP=422;FS=7.719;HRun=0;HaplotypeScore=142.4506;InbreedingCoeff=0.4782;MQ=55.36;MQ0=4;MQRankSum=-5.516;QD=2.30;ReadPosRankSum=2.332;VQSLOD=2.2208;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,1:20:6.98:69,7,0	0/0:7,0:7:21.05:0,21,298	1/1:4,0:2:1.82:5,2,0	0/0:15,0:9:10.80:0,11,91	0/0:18,5:23:1.15:0,1,23	0/0:14,0:14:39.07:0,39,526	0/0:23,0:23:69.15:0,69,962	0/0:11,0:11:27.19:0,27,218	0/0:5,0:5:14.94:0,15,158	0/0:26,0:26:75.12:0,75,1044	0/0:18,0:18:48.12:0,48,706	0/0:14,0:14:35.24:0,35,431	1/1:12,2:14:0.22:19,0,0	0/0:12,0:12:33.09:0,33,470	0/0:2,0:2:6.02:0,6,90	0/0:8,0:8:18.06:0,18,273	1/1:24,4:28:3.09:103,3,0	0/1:8,6:14:48.49:199,0,48	0/0:12,0:11:24.83:0,25,180	0/0:11,0:11:14.60:0,15,91	0/1:21,0:21:0:0,0,0	0/0:16,0:16:48.15:0,48,703	1/1:13,2:15:1.36:4,1,0	0/1:8,2:10:14.66:19,0,15	0/0:28,0:27:78.21:0,78,1107	0/0:25,0:25:60.62:0,61,503	0/0:11,0:11:20.82:0,21,174	0/0:15,0:15:37.24:0,37,325
chr10	70417457	.	GCGCGCGCACGCGCA	G	5058.74	PASS	AB=0.974;AC=20;AF=0.357;AN=56;BaseQRankSum=12.266;DP=417;FS=1.568;HRun=0;HaplotypeScore=192.8323;InbreedingCoeff=0.2435;MQ=53.15;MQ0=4;MQRankSum=-11.908;QD=21.53;ReadPosRankSum=2.086;VQSLOD=4.1271;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:9.95:82,0,10	0/0:7,0:7:21.06:0,21,713	0/0:6,0:3:6.02:0,6,119	0/0:14,0:8:2.11:0,2,128	0/1:23,0:23:15.76:118,0,16	0/0:14,0:14:38.78:0,39,1606	0/0:26,0:26:78.23:0,78,3364	1/1:10,0:10:25.71:289,26,0	0/0:5,0:5:15.05:0,15,672	0/0:23,0:23:69.18:0,69,3115	0/0:17,0:17:51.17:0,51,2372	0/1:11,0:11:49.15:49,0,741	0/1:16,0:16:42.83:99,0,43	0/0:10,0:10:30:0,30,1595	0/0:4,0:4:12.04:0,12,325	0/0:8,0:8:18.06:0,18,536	0/1:28,0:28:15:173,0,15	0/1:14,0:14:99:125,0,108	1/1:12,1:12:35.97:547,36,0	1/1:7,5:12:15.05:536,15,0	0/1:16,1:17:0:0,0,0	0/0:18,0:18:54.19:0,54,2550	0/1:16,0:16:20.82:77,0,21	0/1:12,0:12:18.92:38,0,19	0/0:30,0:29:86.78:0,87,4245	0/1:17,6:23:99:1307,0,227	1/1:6,5:11:24.08:728,24,0	1/1:7,5:12:30.10:891,30,0
chr10	70417467	.	GCGCA	G	2710.39	PASS	AB=0.895;AC=18;AF=0.321;AN=56;BaseQRankSum=10.892;DP=424;FS=4.640;HRun=0;HaplotypeScore=136.4326;InbreedingCoeff=0.4736;MQ=54.38;MQ0=5;MQRankSum=-9.253;QD=14.19;ReadPosRankSum=4.297;VQSLOD=3.2834;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:1.75:2,0,16	0/0:6,0:6:18.06:0,18,406	0/0:10,0:6:15.05:0,15,292	0/0:19,0:13:28.41:0,28,336	0/1:20,0:20:9.88:10,0,19	0/0:15,0:15:41.96:0,42,917	0/0:26,0:26:78.25:0,78,1801	1/1:2,11:13:30.08:469,30,0	0/0:9,0:9:27.09:0,27,670	0/0:25,0:25:75.21:0,75,1646	0/0:18,0:18:51.16:0,51,1128	0/0:9,0:9:17.72:0,18,440	0/0:18,0:18:8.18:0,8,76	0/0:13,0:13:39.13:0,39,929	0/0:6,0:6:18.06:0,18,453	0/0:3,0:3:9.03:0,9,216	0/1:21,0:21:8.10:10,0,8	0/1:12,0:12:16.12:16,0,108	1/1:3,10:12:33:524,33,0	1/1:7,3:10:15.05:267,15,0	0/1:1,15:16:0:0,0,0	0/0:24,0:24:66.21:0,66,1587	0/1:13,0:13:2.59:3,0,49	0/1:12,0:12:2.77:3,0,20	0/0:32,0:31:90.31:0,90,2307	0/1:11,14:25:99:862,0,101	1/1:6,4:10:20:350,20,0	1/1:11,2:13:21.17:373,21,0
chr10	70417535	.	A	AACACACACAC	16756.45	PASS	AB=0.750;AC=27;AF=0.482;AN=56;BaseQRankSum=7.327;DP=577;FS=2.489;HRun=0;HaplotypeScore=206.9205;InbreedingCoeff=0.9047;MQ=68.61;MQ0=0;MQRankSum=-15.453;QD=54.05;ReadPosRankSum=-3.452;VQSLOD=3.7084;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,2:25:33.03:1348,33,0	0/0:6,0:6:15.03:0,15,403	0/0:17,0:16:38.40:0,38,417	0/0:23,0:23:51.55:0,52,814	1/1:18,5:30:42.09:1875,42,0	0/0:17,0:17:45.06:0,45,1131	0/0:24,0:24:63.14:0,63,1637	1/1:34,0:34:84.29:1984,84,0	0/0:24,0:24:69.18:0,69,1916	0/0:21,0:21:57.19:0,57,1728	0/0:17,0:17:39.11:0,39,1061	0/0:21,0:21:60.21:0,60,1863	1/1:17,0:23:32.97:1156,33,0	0/0:18,0:18:51.16:0,51,1520	0/0:15,0:15:42.12:0,42,1188	0/0:13,0:13:39.12:0,39,1132	1/1:16,0:19:21.07:831,21,0	1/1:9,0:11:20.92:475,21,0	1/1:15,2:18:32.89:881,33,0	1/1:8,13:23:30.09:1332,30,0	1/1:11,2:13:5.74:282,6,0	0/0:19,0:19:51.12:0,51,1382	1/1:14,2:22:42.13:1629,42,0	1/1:16,2:22:12.02:435,12,0	0/0:32,0:32:84.20:0,84,2216	0/1:20,6:30:17.27:2028,0,17	1/1:10,13:26:45.15:2072,45,0	1/1:4,1:13:15:428,15,0
chr10	70419400	.	TG	T	1413.63	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.054;DP=600;FS=1.058;HRun=8;HaplotypeScore=98.8378;InbreedingCoeff=0.8156;MQ=87.97;MQ0=1;MQRankSum=-1.125;QD=18.12;ReadPosRankSum=1.942;VQSLOD=3.3464;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.16:0,63,734	0/0:7,0:7:21.06:0,21,253	0/0:44,0:38:14.93:0,15,412	0/0:57,0:45:70.24:0,70,745	0/0:26,0:26:69.21:0,69,829	0/0:21,0:21:63.16:0,63,736	0/0:28,1:29:52.26:0,52,889	0/0:9,0:13:11.28:0,11,65	0/0:20,0:20:60.16:0,60,702	0/0:21,0:21:48.13:0,48,569	0/0:18,0:18:45.14:0,45,543	0/0:23,0:23:54.17:0,54,652	1/1:2,21:23:54.08:521,54,0	0/0:17,0:17:42.12:0,42,496	0/0:32,0:32:93.27:0,93,1110	0/0:10,0:10:27.06:0,27,306	0/0:29,0:30:72.09:0,72,847	0/0:26,0:26:72.22:0,72,867	0/0:2,0:6:9.18:0,9,53	0/0:4,0:7:2.88:0,3,15	0/0:6,0:15:6.19:0,6,30	0/0:23,0:23:69.19:0,69,808	1/1:0,28:28:62.50:588,63,0	1/1:6,21:27:47.80:446,48,0	0/0:30,0:30:81.21:0,81,942	0/0:7,0:11:20.51:0,21,158	0/0:0,0:9:6.19:0,6,39	0/0:1,0:2:5.77:0,6,34
chr10	70420575	.	G	GGA	1944.65	PASS	AB=0.913;AC=28;AF=0.560;AN=50;BaseQRankSum=3.036;DP=605;FS=6.479;HRun=0;HaplotypeScore=101.3627;InbreedingCoeff=0.5634;MQ=69.74;MQ0=10;MQRankSum=-1.471;QD=5.04;ReadPosRankSum=-3.823;VQSLOD=1.2755;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:0:0,0,0	1/1:6,0:13:6:52,6,0	./.	0/1:23,0:15:0:0,0,0	1/1:30,0:30:11.97:131,12,0	0/1:25,0:25:15.47:15,0,186	0/0:18,0:20:23.73:0,24,226	1/1:25,0:25:21.92:160,22,0	0/0:22,0:22:12.02:0,12,125	1/1:17,8:28:27.01:321,27,0	0/1:12,8:21:37.10:204,0,37	0/0:24,0:24:30:0,30,307	0/0:21,0:24:35.92:0,36,371	0/0:15,0:16:17.88:0,18,179	1/1:17,10:31:12.82:328,13,0	0/0:27,0:27:9.78:0,10,275	1/1:22,0:22:15:148,15,0	1/1:4,1:18:14.98:144,15,0	1/1:22,0:22:9.37:73,9,0	./.	./.	0/0:17,0:19:11.85:0,12,107	0/1:19,0:20:6.89:7,0,122	0/1:20,8:27:99:156,0,108	0/0:24,0:24:26.89:0,27,272	1/1:25,0:30:29.95:202,30,0	1/1:6,0:18:15:131,15,0	1/1:13,0:11:6.59:52,7,0
chr10	70422664	.	CT	C	3933.81	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=14.144;DP=738;FS=0.000;HRun=6;HaplotypeScore=75.4687;InbreedingCoeff=0.9985;MQ=84.69;MQ0=0;MQRankSum=-2.618;QD=28.93;ReadPosRankSum=2.854;VQSLOD=4.2808;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,51:52:99:1483,138,0	0/0:7,0:7:21.04:0,21,254	0/0:21,0:21:45.32:0,45,608	0/0:24,0:24:54.10:0,54,640	1/1:1,20:21:57.14:613,57,0	0/0:25,0:25:72.23:0,72,947	0/0:40,0:40:99:0,117,1496	0/0:38,0:38:99:0,102,1315	0/0:33,0:33:93.25:0,93,1178	0/0:15,0:15:39.13:0,39,513	0/0:15,0:15:39.13:0,39,513	0/0:40,0:40:99:0,114,1499	0/0:26,0:26:78.14:0,78,957	0/0:29,0:29:84.27:0,84,1105	0/0:22,0:22:60.18:0,60,773	0/0:23,0:23:66.20:0,66,854	1/1:1,38:39:99:1225,114,0	1/1:2,22:24:57.14:613,57,0	0/0:14,0:14:42.14:0,42,551	0/0:15,0:15:39.12:0,39,500	0/0:39,0:39:99:0,111,1447	0/0:23,0:23:69.21:0,69,882	0/0:22,0:22:66.21:0,66,868	0/0:35,0:35:99:0,99,1303	0/0:22,0:22:60.18:0,60,775	0/0:38,0:38:99:0,102,1330	0/0:27,0:27:81.26:0,81,1066	0/0:9,0:9:27.09:0,27,355
chr10	70423102	.	AGGCTCCT	A	1902.66	PASS	AB=0.973;AC=33;AF=0.589;AN=56;BaseQRankSum=-0.150;DP=241;FS=48.728;HRun=0;HaplotypeScore=62.0834;InbreedingCoeff=0.3542;MQ=78.80;MQ0=0;MQRankSum=1.187;QD=11.53;ReadPosRankSum=0.129;VQSLOD=0.0708;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:32.91:268,33,0	0/0:4,0:4:11.64:0,12,78	0/1:13,4:17:81.34:104,0,81	0/1:21,0:20:14.91:113,0,15	1/1:3,0:3:5.99:50,6,0	0/1:12,0:12:11.10:11,0,95	0/0:18,0:17:25.87:0,26,290	1/1:6,0:6:13.26:116,13,0	0/0:13,0:13:28.92:0,29,222	0/1:7,0:7:36.11:36,0,53	0/0:3,0:3:3:0,3,25	0/0:11,0:11:24.86:0,25,147	1/1:4,0:4:11.99:101,12,0	0/0:18,0:18:45.66:0,46,327	0/0:4,0:4:8.99:0,9,74	0/0:5,0:5:11.36:0,11,83	1/1:11,0:11:32.86:258,33,0	1/1:15,0:15:38.93:322,39,0	1/1:4,0:4:3:29,3,0	1/1:2,0:2:5.99:50,6,0	1/1:13,0:12:26.80:205,27,0	0/1:5,0:5:6.98:7,0,19	1/1:2,0:2:2.99:24,3,0	1/1:15,0:15:38.50:291,38,0	0/1:6,0:6:16.99:17,0,20	1/1:3,0:3:3:27,3,0	0/1:4,0:4:4.96:41,0,5	1/1:1,0:1:2.98:21,3,0
chr10	70424941	.	GGAGAGAGA	G	789.81	PASS	AB=1.000;AC=12;AF=0.240;AN=50;BaseQRankSum=5.627;DP=465;FS=26.705;HRun=0;HaplotypeScore=130.0162;InbreedingCoeff=0.5061;MQ=48.25;MQ0=20;MQRankSum=-4.155;QD=6.81;ReadPosRankSum=-0.100;VQSLOD=0.9881;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:3.01:0,3,91	0/0:6,0:6:0.89:0,1,2	./.	./.	0/0:15,0:14:12.04:0,12,343	0/0:20,0:20:20.54:0,21,480	0/0:19,0:19:11.91:0,12,309	0/0:31,0:27:13.86:0,14,201	0/0:16,0:17:15.03:0,15,319	0/0:12,0:12:10.46:0,10,136	0/0:13,0:12:6.02:0,6,164	0/0:13,0:13:9.46:0,9,115	0/1:18,0:18:12.60:223,0,13	0/0:9,0:9:3.01:0,3,73	0/0:16,0:15:9.03:0,9,183	0/0:16,0:15:18.06:0,18,493	0/0:18,0:17:12.51:0,13,403	0/0:13,0:12:12.04:0,12,409	1/1:10,5:15:14.96:187,15,0	./.	0/0:15,0:15:0:0,0,0	0/0:23,0:23:15.03:0,15,327	1/1:21,0:21:11.40:132,11,0	1/1:27,0:27:16.61:262,17,0	0/0:15,0:14:5.89:0,6,140	0/1:15,0:14:45.67:46,0,61	1/1:10,0:13:2.64:16,3,0	1/1:7,0:6:3.01:74,3,0
chr10	70424958	.	GA	G	413.86	PASS	AB=0.713;AC=3;AF=0.054;AN=56;BaseQRankSum=7.341;DP=490;FS=10.794;HRun=1;HaplotypeScore=93.0893;InbreedingCoeff=-0.0682;MQ=46.91;MQ0=30;MQRankSum=-6.655;QD=5.17;ReadPosRankSum=3.029;VQSLOD=-0.2700;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:39.04:0,39,445	0/0:7,0:7:14.53:0,15,159	0/0:9,0:1:3.01:0,3,37	0/0:18,0:3:7.27:0,7,78	0/0:18,0:17:33.09:0,33,422	0/0:19,0:20:51.58:0,52,629	0/0:18,0:18:36.44:0,36,474	0/0:28,0:25:73.78:0,74,918	0/0:18,0:18:42.12:0,42,514	0/0:9,0:9:27.09:0,27,338	0/0:13,0:12:21.07:0,21,276	0/0:20,0:20:39.79:0,40,463	0/1:14,7:21:99:219,0,260	0/0:15,0:15:32.93:0,33,415	0/0:19,0:18:32.78:0,33,411	0/0:14,0:13:30.10:0,30,388	0/0:24,0:21:39.60:0,40,507	0/0:17,0:16:45.14:0,45,591	0/0:14,0:13:36.11:0,36,440	0/0:13,0:13:18.05:0,18,228	0/0:14,0:14:24.08:0,24,302	0/0:24,0:24:46.65:0,47,576	0/1:17,13:25:99:134,0,264	0/1:16,13:27:99:160,0,282	0/0:14,0:13:21.04:0,21,260	0/0:17,0:15:39.10:0,39,476	0/0:19,0:19:42.58:0,43,532	0/0:11,0:7:19.61:0,20,224
chr10	70428328	.	G	GA	1133.53	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.677;DP=569;FS=16.895;HRun=9;HaplotypeScore=59.3137;InbreedingCoeff=0.9640;MQ=66.24;MQ0=1;MQRankSum=-0.929;QD=26.36;ReadPosRankSum=2.526;VQSLOD=2.5672;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,39:43:99:1228,112,0	0/0:10,0:10:20.99:0,21,182	0/0:9,0:8:14.79:0,15,117	0/0:16,0:11:20.96:0,21,176	0/0:18,0:17:38.97:0,39,334	0/0:21,0:21:50.98:0,51,443	0/0:29,0:28:68.96:0,69,595	0/0:27,0:27:56.05:0,56,529	0/0:15,0:15:38.99:0,39,338	0/0:20,1:21:23.79:0,24,432	0/0:20,0:20:50.84:0,51,428	0/0:28,0:28:74.96:0,75,651	0/0:15,0:15:44.99:0,45,391	0/0:20,0:20:53.18:0,53,441	0/0:16,0:16:47.97:0,48,413	0/0:17,0:16:44.99:0,45,391	0/0:24,0:24:62.98:0,63,547	0/0:2,0:30:50.92:0,51,150	0/0:21,0:20:50.98:0,51,442	0/0:20,0:20:53.98:0,54,468	0/0:16,0:16:38.91:0,39,326	0/0:20,0:20:53.93:0,54,461	0/0:17,1:18:17.77:0,18,374	0/0:33,0:32:86.98:0,87,754	0/0:13,0:13:35.77:0,36,308	0/0:16,0:16:32.98:0,33,286	0/0:24,0:24:62.96:0,63,542	0/0:9,0:9:26.95:0,27,227
chr10	70431401	.	CTG	C	2774.45	PASS	AB=0.838;AC=10;AF=0.179;AN=56;BaseQRankSum=9.641;DP=1111;FS=2.190;HRun=0;HaplotypeScore=146.5680;InbreedingCoeff=0.4905;MQ=60.46;MQ0=17;MQRankSum=3.304;QD=12.22;ReadPosRankSum=4.741;VQSLOD=3.6976;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:60:91.69:0,92,928	0/0:20,0:20:35.94:0,36,489	0/0:67,0:28:24.46:0,24,377	0/0:64,0:26:22.22:0,22,333	0/0:27,1:28:21.81:0,22,748	0/0:16,3:18:0.78:0,1,486	0/1:40,2:42:4.45:4,0,856	0/0:46,0:46:63.41:0,63,975	0/0:38,1:39:83.19:0,83,1363	0/0:39,1:41:33.07:0,33,913	0/0:28,0:28:61.09:0,61,947	0/0:51,3:54:17.37:0,17,1635	0/1:11,33:44:16.43:770,0,16	0/0:52,4:56:58.76:0,59,1805	0/0:50,0:50:98.86:0,99,1835	0/0:31,2:33:10.62:0,11,1071	0/0:34,1:35:44.72:0,45,1105	1/1:9,13:24:53.82:593,54,0	0/1:24,2:24:51.44:51,0,295	0/0:22,0:22:33.11:0,33,520	0/0:111,9:121:52.01:0,52,2685	0/1:23,3:26:16.49:16,0,697	1/1:4,15:19:39.12:459,39,0	1/1:6,37:45:90.10:1039,90,0	0/0:30,0:30:63.21:0,63,965	0/0:29,1:30:21.83:0,22,782	0/0:24,1:25:15.81:0,16,688	0/0:14,0:14:34.51:0,35,447
chr10	70431515	.	TTG	T	2466.66	PASS	AB=0.883;AC=17;AF=0.304;AN=56;BaseQRankSum=11.474;DP=1075;FS=2.647;HRun=0;HaplotypeScore=145.5004;InbreedingCoeff=0.2311;MQ=56.39;MQ0=17;MQRankSum=2.131;QD=5.40;ReadPosRankSum=4.270;VQSLOD=3.2780;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,44:82:65.41:813,65,0	0/1:7,1:8:13.43:13,0,255	0/0:53,1:14:11.93:0,12,155	0/0:62,0:17:11.91:0,12,126	0/1:34,2:37:2.79:3,0,807	0/0:19,0:19:45.13:0,45,665	0/1:32,5:37:72.16:72,0,722	0/0:37,0:38:30.95:0,31,506	0/0:38,1:39:46.73:0,47,1114	0/0:45,3:48:21.51:0,22,1097	0/0:18,1:18:1.63:0,2,447	0/1:46,6:52:70.26:70,0,1316	1/1:9,20:28:21.16:458,21,0	0/0:41,4:45:8:0,8,1427	0/0:44,0:44:99:0,105,1620	0/0:36,0:36:49.75:0,50,979	0/0:47,1:48:49.69:0,50,1185	1/1:13,0:39:56.82:279,57,0	0/0:24,0:23:33.52:0,34,459	0/1:24,2:26:2.46:2,0,751	0/0:89,0:89:99:0,135,1819	0/0:35,0:35:27.74:0,28,745	1/1:9,7:17:18.05:207,18,0	0/1:23,14:41:16.74:645,0,17	0/1:25,5:29:40.31:40,0,723	0/1:37,1:38:24.74:25,0,970	0/0:17,1:18:4.66:0,5,501	0/1:18,3:21:14.88:15,0,594
chr10	70434149	.	CA	C	3892.74	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.220;DP=685;FS=2.987;HRun=1;HaplotypeScore=66.4913;InbreedingCoeff=0.9949;MQ=92.93;MQ0=0;MQRankSum=-6.095;QD=37.07;ReadPosRankSum=4.972;VQSLOD=3.9985;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1607	0/0:11,0:11:33.11:0,33,524	0/0:31,0:31:92.67:0,93,1404	0/0:26,0:26:74.24:0,74,1092	0/0:18,0:18:54.13:0,54,750	0/0:16,0:16:45.15:0,45,711	0/0:34,0:34:99:0,102,1590	0/0:37,0:37:99:0,111,1775	0/0:22,0:22:63.21:0,63,1007	0/0:19,0:19:48.16:0,48,761	0/0:15,0:15:42.13:0,42,633	0/0:29,0:29:87.30:0,87,1389	1/1:0,19:19:57.19:795,57,0	0/0:28,0:28:84.29:0,84,1343	0/0:39,0:39:99:0,117,1839	0/0:22,0:22:66.21:0,66,1028	0/0:32,0:32:96.33:0,96,1522	1/1:0,35:35:87.29:1213,87,0	0/0:27,0:27:78.26:0,78,1218	0/0:18,0:18:54.17:0,54,826	0/0:30,0:30:90.26:0,90,1358	0/0:22,0:22:66.22:0,66,1026	1/1:0,10:10:23.85:335,24,0	1/1:0,41:41:99:1550,111,0	0/0:16,0:16:48.16:0,48,759	0/0:23,0:23:60.19:0,60,890	0/0:25,0:25:75.24:0,75,1164	0/0:5,0:5:15.05:0,15,240
chr10	70435900	.	TCA	T	938.58	PASS	AB=0.851;AC=19;AF=0.365;AN=52;BaseQRankSum=10.225;DP=745;FS=6.681;HRun=0;HaplotypeScore=128.1714;InbreedingCoeff=0.0777;MQ=57.88;MQ0=12;MQRankSum=-0.572;QD=2.28;ReadPosRankSum=2.438;VQSLOD=1.8142;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:42:10.84:55,11,0	0/0:21,0:21:21.05:0,21,296	./.	./.	0/0:16,1:16:14.96:0,15,214	0/0:16,0:16:3.51:0,4,338	0/1:26,3:29:61.42:61,0,408	0/0:25,0:25:15.05:0,15,226	0/1:25,3:28:61.24:61,0,619	0/0:34,1:35:26.62:0,27,759	0/0:20,2:22:30.10:0,30,452	0/0:32,1:34:23.16:0,23,744	1/1:9,0:31:36.90:181,37,0	0/0:26,1:27:17.65:0,18,670	0/0:16,1:17:2.60:0,3,465	0/0:26,0:26:42.14:0,42,636	0/1:21,4:25:12.85:13,0,669	1/1:11,0:20:12.03:66,12,0	0/1:14,2:16:50.77:51,0,94	0/1:14,5:20:99:112,0,281	0/1:37,7:44:25.29:25,0,924	0/1:26,5:31:40.59:41,0,660	1/1:9,0:23:8.27:42,8,0	0/1:14,0:19:0.20:0,0,0	0/1:20,14:35:99:359,0,213	0/1:22,1:24:8.97:9,0,246	0/1:22,3:24:27.43:27,0,455	0/0:17,0:16:30.10:0,30,449
chr10	70436253	.	T	TG	1975.29	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.725;DP=811;FS=3.366;HRun=2;HaplotypeScore=74.6055;InbreedingCoeff=0.9997;MQ=82.34;MQ0=0;MQRankSum=-4.633;QD=35.91;ReadPosRankSum=0.568;VQSLOD=4.2144;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,52:55:99:2070,144,0	0/0:12,0:12:33.09:0,33,396	0/0:26,0:26:75.22:0,75,905	0/0:18,0:18:51.13:0,51,601	0/0:24,0:24:63.20:0,63,780	0/0:17,0:17:51.14:0,51,619	0/0:42,0:42:99:0,120,1434	0/0:27,0:27:81.23:0,81,973	0/0:33,0:33:99:0,99,1215	0/0:33,0:33:96.30:0,96,1181	0/0:24,0:24:66.20:0,66,807	0/0:27,0:27:81.22:0,81,966	0/0:29,0:29:84.23:0,84,1014	0/0:42,0:42:99:0,120,1474	0/0:37,0:37:99:0,105,1302	0/0:31,0:31:93.29:0,93,1153	0/0:35,0:35:99:0,105,1301	0/0:28,0:28:81.25:0,81,1003	0/0:27,0:27:72.22:0,72,891	0/0:21,0:21:60.19:0,60,739	0/0:38,0:38:99:0,114,1400	0/0:28,0:28:81.24:0,81,991	0/0:28,0:28:78.24:0,78,964	0/0:35,0:35:99:0,102,1250	0/0:22,0:22:63.20:0,63,781	0/0:29,0:29:75.24:0,75,930	0/0:29,0:29:87.24:0,87,1052	0/0:14,0:13:39.12:0,39,483
chr10	70436494	.	CTCTCTG	C	2388.52	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.359;DP=810;FS=9.197;HRun=0;HaplotypeScore=206.8934;InbreedingCoeff=0.9950;MQ=63.46;MQ0=20;MQRankSum=-6.886;QD=30.62;ReadPosRankSum=2.354;VQSLOD=2.3133;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:58.49:0,58,1227	0/0:7,0:7:18.04:0,18,492	0/0:41,0:22:28.06:0,28,684	0/0:56,0:30:37.82:0,38,938	0/0:24,0:24:51.01:0,51,1279	0/0:19,0:19:53.97:0,54,1618	0/0:29,0:29:72.20:0,72,2030	0/0:35,0:34:64.71:0,65,1704	0/0:23,0:22:63.05:0,63,1827	0/0:26,0:25:71.22:0,71,1883	0/0:16,0:16:45.14:0,45,1192	0/0:41,0:41:99:0,106,2895	1/1:22,9:31:71.01:1418,71,0	0/0:34,0:34:81.25:0,81,2321	0/0:35,0:35:96.17:0,96,2678	0/0:22,0:22:63.22:0,63,1960	0/0:52,0:52:99:0,138,4156	0/0:24,0:24:31.45:0,31,786	0/0:19,0:18:39.57:0,40,912	0/0:23,0:23:51.10:0,51,1403	0/0:39,0:37:84.75:0,85,2413	0/0:20,0:20:45.13:0,45,1314	1/1:16,3:19:21.07:418,21,0	1/1:21,7:28:32.99:694,33,0	0/0:34,0:34:93.32:0,93,2752	0/0:41,0:41:99:0,108,2824	0/0:22,0:22:60.17:0,60,1687	0/0:14,0:13:34.36:0,34,889
chr10	70436498	.	CTG	C	1007.78	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=10.305;DP=794;FS=0.534;HRun=0;HaplotypeScore=154.9186;InbreedingCoeff=0.8484;MQ=60.80;MQ0=19;MQRankSum=-8.638;QD=10.08;ReadPosRankSum=1.747;VQSLOD=3.5493;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:62.48:0,62,439	0/0:7,0:7:17.72:0,18,272	0/0:35,0:17:24.20:0,24,333	0/0:53,0:26:24.69:0,25,480	0/0:25,0:25:53.81:0,54,702	0/0:19,0:19:53.96:0,54,875	0/0:29,0:29:78.03:0,78,1125	0/0:26,0:25:55.65:0,56,874	0/0:24,0:23:65.70:0,66,904	0/0:25,0:24:67.47:0,67,956	0/0:18,0:18:48.07:0,48,703	0/0:40,0:40:99:0,108,1535	1/1:21,11:32:66.15:646,66,0	0/0:33,0:33:62.63:0,63,1141	0/0:37,0:37:99:0,101,1415	0/0:24,0:24:68.56:0,69,1057	0/0:48,5:53:99:0,121,2121	0/1:23,0:23:8.40:8,0,463	0/0:20,0:19:38.38:0,38,532	0/0:25,0:25:57.96:0,58,790	0/0:40,0:38:92.87:0,93,1309	0/0:20,0:20:47.98:0,48,686	1/1:5,6:17:17.73:171,18,0	1/1:21,7:28:33.05:328,33,0	0/0:32,0:32:93.04:0,93,1432	0/0:38,0:38:99:0,103,1460	0/0:22,0:22:60.03:0,60,970	0/0:13,0:12:33.60:0,34,442
chr10	70436502	.	CTCTCTGTGTGTGTGTGTG	C	4131.13	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=11.410;DP=791;FS=0.520;HRun=0;HaplotypeScore=360.0429;InbreedingCoeff=0.7045;MQ=58.50;MQ0=18;MQRankSum=-9.988;QD=32.27;ReadPosRankSum=1.084;VQSLOD=0.9536;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:99:275,0,595	0/0:7,0:7:17.37:0,17,807	0/0:30,0:14:28.03:0,28,548	0/0:49,0:22:38.87:0,39,700	0/0:24,0:24:54.16:0,54,2885	0/0:21,0:21:63.22:0,63,3298	0/0:31,0:31:84.29:0,84,4385	0/0:27,0:26:75.24:0,75,2160	0/0:25,0:24:66.21:0,66,2972	0/0:29,0:28:79.50:0,80,4194	0/0:17,0:17:42.12:0,42,2042	0/0:41,0:41:99:0,110,6434	1/1:19,11:30:69.16:2135,69,0	0/0:35,0:35:81.25:0,81,4900	0/0:34,0:34:93.29:0,93,5126	0/0:26,0:26:75.22:0,75,4027	0/0:57,0:56:99:0,154,8682	0/1:23,0:23:99:112,0,619	0/0:16,0:15:45.15:0,45,1542	0/0:25,0:25:60.19:0,60,2969	0/0:40,0:38:94.86:0,95,5195	0/0:21,0:21:51.17:0,51,2851	1/1:9,5:15:21.07:735,21,0	1/1:20,5:27:30.04:875,30,0	0/0:33,0:33:96.33:0,96,5359	0/0:42,0:42:97.30:0,97,6399	0/0:20,0:20:54.19:0,54,3710	0/0:13,0:12:35.95:0,36,2127
chr10	70436506	.	CTG	C	578.58	PASS	AB=0.928;AC=22;AF=0.393;AN=56;BaseQRankSum=9.330;DP=790;FS=6.827;HRun=0;HaplotypeScore=150.6070;InbreedingCoeff=-0.0247;MQ=56.17;MQ0=22;MQRankSum=-3.266;QD=1.18;ReadPosRankSum=3.692;VQSLOD=2.1745;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:32:4.64:20,5,0	0/0:8,0:8:10.26:0,10,133	0/0:29,0:11:2.50:0,2,9	0/1:47,0:18:13:13,0,41	0/0:19,4:23:2.07:0,2,459	0/0:22,1:23:5.17:0,5,470	0/1:32,1:33:20.36:20,0,480	0/1:27,0:26:9.29:9,0,174	0/1:22,3:24:41.19:41,0,268	0/1:25,4:28:86.83:87,0,470	0/0:15,0:15:21.04:0,21,274	0/1:36,4:41:36.10:36,0,774	1/1:24,0:29:36.87:179,37,0	0/0:31,4:35:20.07:0,20,656	0/1:28,6:34:70.07:70,0,686	0/0:24,3:27:10.30:0,10,551	0/0:58,0:57:8.84:0,9,1145	1/1:16,0:21:12.25:74,12,0	0/0:15,0:16:0.91:0,1,130	0/1:22,3:25:34.98:35,0,361	0/0:37,3:38:16.64:0,17,629	0/1:18,2:20:6.95:7,0,339	1/1:15,0:15:11.08:50,11,0	1/1:23,0:26:6.18:47,6,0	0/1:31,2:33:16.89:17,0,625	0/1:38,4:42:31.71:32,0,787	0/0:24,0:24:44.97:0,45,624	0/1:12,0:11:9.90:10,0,289
chr10	70437290	.	GGTGTGTGTGT	G	302.20	PASS	AB=0.830;AC=5;AF=0.093;AN=54;BaseQRankSum=2.004;DP=808;FS=4.360;HRun=0;HaplotypeScore=212.9203;InbreedingCoeff=0.2759;MQ=62.61;MQ0=24;MQRankSum=-3.980;QD=2.61;ReadPosRankSum=1.389;VQSLOD=2.6040;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:24.01:0,24,338	0/0:4,0:5:6.01:0,6,75	./.	0/0:79,0:34:0:0,0,0	0/0:17,0:17:18.04:0,18,389	0/0:9,0:13:6.02:0,6,188	0/1:26,0:27:5.67:6,0,460	0/0:29,0:28:11.39:0,11,130	0/0:26,0:28:54.15:0,54,1344	0/0:24,0:24:30.09:0,30,702	0/0:14,0:14:15.04:0,15,429	0/0:28,0:33:20.86:0,21,561	1/1:16,9:24:8.58:262,9,0	0/0:22,0:24:39.05:0,39,892	0/0:16,0:16:21.05:0,21,653	0/0:18,0:20:36.08:0,36,788	0/0:39,0:39:66.23:0,66,2440	0/0:32,0:36:69.67:0,70,2153	0/0:20,0:18:16.26:0,16,339	0/0:15,0:15:17.80:0,18,441	0/0:62,0:63:57.15:0,57,1332	0/0:17,0:20:18.03:0,18,363	0/0:14,6:20:2.98:0,3,22	0/1:35,19:52:78.97:79,0,108	0/0:19,0:18:27.07:0,27,914	0/0:28,0:32:40.46:0,40,593	0/0:14,0:17:21.01:0,21,303	0/1:7,1:8:65.86:66,0,449
chr10	70438248	.	TGTGTCG	T	815.81	PASS	AB=1.000;AC=23;AF=0.605;AN=38;BaseQRankSum=-4.102;DP=241;FS=5.740;HRun=0;HaplotypeScore=35.5732;InbreedingCoeff=0.4417;MQ=65.08;MQ0=17;MQRankSum=-2.218;QD=17.00;ReadPosRankSum=0.977;VQSLOD=1.6239;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,5:9:1.77:34,2,0	1/1:0,3:1:3.01:46,3,0	0/0:59,0:11:12.75:0,13,286	0/0:66,0:13:17.78:0,18,200	./.	1/1:0,5:5:4.50:55,5,0	./.	1/1:0,2:2:6.02:114,6,0	0/1:3,0:3:0:0,0,0	1/1:0,3:3:6.91:99,7,0	./.	1/1:0,3:3:3.01:39,3,0	1/1:0,2:1:3.01:36,3,0	0/0:2,3:5:0:0,0,0	0/0:0,5:5:0.47:0,0,1	0/0:0,10:9:0.94:0,1,2	1/1:0,4:4:5.99:71,6,0	1/1:0,5:5:3.01:63,3,0	1/1:0,3:3:9.03:149,9,0	0/0:3,3:5:0.47:0,0,1	./.	./.	./.	./.	0/0:0,5:5:0.47:0,0,1	1/1:0,0:6:15.04:217,15,0	./.	./.
chr10	70439227	.	TCATGGCAGGTTGAGACCCA	T	5158.51	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.330;DP=676;FS=17.074;HRun=0;HaplotypeScore=327.5739;InbreedingCoeff=0.9974;MQ=86.10;MQ0=0;MQRankSum=-8.915;QD=90.50;ReadPosRankSum=3.087;VQSLOD=3.5588;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,169,11608	0/0:14,0:14:39.13:0,39,3116	0/0:29,0:28:59.96:0,60,4601	0/0:25,0:25:65.89:0,66,4038	0/0:26,0:26:75.26:0,75,3834	0/0:15,0:15:42.14:0,42,2326	0/0:33,0:33:99:0,99,7937	0/0:32,0:32:93.29:0,93,5972	0/0:28,0:28:84.29:0,84,6915	0/0:19,0:19:57.20:0,57,3453	0/0:16,0:16:42.14:0,42,2600	0/0:31,0:31:93.32:0,93,7829	1/1:1,13:14:29.83:1569,30,0	0/0:22,0:22:63.22:0,63,5273	0/0:29,0:29:84.27:0,84,7076	0/0:26,0:26:78.25:0,78,5886	0/0:28,0:28:84.29:0,84,6873	1/1:7,12:19:21.07:1091,21,0	0/0:17,0:17:42.14:0,42,2868	0/0:26,0:26:69.24:0,69,3875	0/0:50,0:50:99:0,147,11264	0/0:22,0:22:66.21:0,66,3642	1/1:0,9:9:24.08:1206,24,0	1/1:3,12:15:24.08:1292,24,0	0/0:21,0:21:57.20:0,57,3485	0/0:23,0:23:63.22:0,63,4166	0/0:18,0:18:51.18:0,51,4123	0/0:10,0:10:30.10:0,30,2771
chr10	70439964	.	TA	T	3936.52	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.091;DP=492;FS=6.514;HRun=1;HaplotypeScore=64.1832;InbreedingCoeff=0.9966;MQ=89.89;MQ0=0;MQRankSum=-2.348;QD=33.36;ReadPosRankSum=1.593;VQSLOD=3.1094;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,23:31:82.72:955,83,0	0/0:8,0:8:24.03:0,24,347	0/0:23,0:23:66.19:0,66,1005	0/0:17,0:17:39.20:0,39,628	0/0:17,0:17:51.14:0,51,763	0/0:18,0:18:54.18:0,54,862	0/0:30,0:30:87.28:0,87,1363	0/0:23,0:23:66.21:0,66,1013	0/0:8,0:8:24.08:0,24,383	0/0:17,0:17:51.17:0,51,815	0/0:8,0:8:24.08:0,24,364	0/0:16,0:16:48.15:0,48,744	1/1:1,18:19:53.10:671,53,0	0/0:15,0:15:45.14:0,45,694	0/0:14,0:14:42.14:0,42,662	0/0:15,0:15:45.15:0,45,719	0/0:26,0:26:78.26:0,78,1233	1/1:2,29:31:93.25:1140,93,0	0/0:13,0:13:39.10:0,39,596	0/0:15,0:15:42.14:0,42,671	0/0:18,0:18:51.14:0,51,768	0/0:12,0:12:33.11:0,33,522	1/1:2,14:16:38.06:492,38,0	1/1:0,21:21:54.17:678,54,0	0/0:16,0:16:45.15:0,45,711	0/0:17,0:17:48.16:0,48,768	0/0:22,0:22:66.21:0,66,1025	0/0:6,0:6:18.06:0,18,287
chr10	70440752	.	GA	G	2755.51	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.814;DP=677;FS=0.362;HRun=10;HaplotypeScore=68.2218;InbreedingCoeff=0.9880;MQ=76.20;MQ0=0;MQRankSum=-3.074;QD=19.40;ReadPosRankSum=2.691;VQSLOD=4.5674;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,46:50:98.79:1087,99,0	0/0:9,0:9:24.06:0,24,265	0/0:29,0:28:30.14:0,30,391	0/0:14,0:12:18.35:0,18,177	0/0:28,0:29:77.95:0,78,820	0/0:20,1:21:25.03:0,25,484	0/0:18,0:18:42.10:0,42,457	0/0:29,1:30:55.16:0,55,830	0/0:24,0:24:69.19:0,69,763	0/0:31,0:32:78.55:0,79,866	0/0:21,0:21:54.14:0,54,589	0/0:31,0:32:87.02:0,87,929	1/1:6,16:22:44.85:391,45,0	0/0:22,0:22:54.12:0,54,581	0/0:24,1:25:37.12:0,37,637	0/0:15,0:16:18.90:0,19,412	0/0:34,3:37:21.11:0,21,917	1/1:1,24:25:56.95:490,57,0	0/0:22,1:23:31.09:0,31,563	0/0:21,0:21:50.87:0,51,543	0/0:16,0:17:49:0,49,525	0/0:16,1:17:13.05:0,13,372	1/1:2,21:23:56.98:495,57,0	1/1:4,18:22:53.98:469,54,0	0/0:29,0:28:78.19:0,78,847	0/0:27,0:28:69.01:0,69,738	0/0:27,1:29:51.95:0,52,764	0/0:10,0:12:20.72:0,21,195
chr10	70441658	.	AG	A	772.47	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=3.444;DP=277;FS=2.492;HRun=6;HaplotypeScore=41.4599;InbreedingCoeff=0.8175;MQ=80.61;MQ0=1;MQRankSum=0.492;QD=13.79;ReadPosRankSum=2.848;VQSLOD=2.1488;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.10:0,39,482	0/0:4,0:4:9.03:0,9,118	0/1:10,0:8:9.12:9,0,57	0/0:13,1:12:10.11:0,10,173	0/0:6,0:6:15.05:0,15,196	0/0:7,0:7:18.06:0,18,237	0/0:11,0:11:26.83:0,27,279	0/0:16,0:16:33.04:0,33,421	0/0:5,0:5:12.01:0,12,139	0/0:10,0:10:30.10:0,30,395	0/0:6,0:6:18.04:0,18,211	0/0:13,0:13:32.76:0,33,389	1/1:1,9:10:14.90:161,15,0	0/0:17,0:17:39.03:0,39,477	0/0:9,0:9:22.14:0,22,192	0/0:13,0:13:27.02:0,27,318	0/0:9,0:9:15.01:0,15,178	1/1:5,7:12:17.63:180,18,0	0/0:5,0:5:15.05:0,15,193	0/0:6,0:6:18.06:0,18,237	0/0:14,0:14:42.12:0,42,536	0/0:9,0:9:27.07:0,27,341	1/1:1,15:16:39.10:419,39,0	1/1:2,6:8:14.99:161,15,0	0/0:7,0:7:18.06:0,18,237	0/0:11,0:11:30.09:0,30,376	0/0:15,0:15:41.95:0,42,472	./.
chr10	70442856	.	AC	A	1496.88	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.276;DP=724;FS=1.820;HRun=1;HaplotypeScore=87.2706;InbreedingCoeff=0.9917;MQ=63.08;MQ0=0;MQRankSum=-0.766;QD=26.26;ReadPosRankSum=-0.181;VQSLOD=3.4546;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,3:33:48.22:0,48,1102	0/0:6,0:6:15.94:0,16,237	0/0:30,0:25:72.19:0,72,1026	0/0:23,0:20:54.04:0,54,743	0/0:27,0:27:77.03:0,77,1149	0/0:24,0:24:72.25:0,72,1134	0/0:24,0:24:72.24:0,72,1123	0/0:30,0:30:90.28:0,90,1323	0/0:24,0:24:72.23:0,72,1094	0/0:32,0:32:96.32:0,96,1480	0/0:17,0:17:51.17:0,51,788	0/0:25,0:25:73.12:0,73,1114	1/1:3,11:14:18.15:289,18,0	0/0:30,0:30:90.28:0,90,1373	0/0:23,0:23:69.14:0,69,998	0/0:24,0:24:72.20:0,72,1065	0/0:39,0:39:99:0,112,1705	0/0:39,0:39:82.31:0,82,305	0/0:21,0:21:63.20:0,63,934	0/0:27,0:27:78.25:0,78,1196	0/0:37,0:37:99:0,111,1677	0/0:21,0:21:63.21:0,63,990	1/1:6,16:22:58.55:723,59,0	1/1:4,17:21:32.91:626,33,0	0/0:24,0:24:67.86:0,68,1095	0/0:37,0:37:99:0,111,1727	0/0:42,0:42:99:0,126,1932	0/0:8,0:8:24.04:0,24,308
chr10	70442859	.	AC	A	2940.46	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.733;DP=718;FS=3.030;HRun=1;HaplotypeScore=81.4082;InbreedingCoeff=0.9581;MQ=63.11;MQ0=0;MQRankSum=0.281;QD=30.63;ReadPosRankSum=1.305;VQSLOD=3.4722;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:33:6.09:0,6,155	0/0:6,0:6:11.45:0,11,187	0/0:27,0:22:66.17:0,66,808	0/0:24,0:21:57.01:0,57,692	0/0:25,0:25:70.08:0,70,958	0/0:23,0:23:69.20:0,69,951	0/0:23,0:23:69.21:0,69,956	0/0:30,0:30:90.26:0,90,1141	0/0:24,0:24:72.24:0,72,997	0/0:33,0:33:96.20:0,96,1262	0/0:19,0:19:54.07:0,54,701	0/0:26,0:26:71.66:0,72,1000	1/1:12,2:14:29.67:346,30,0	0/0:27,0:27:81.22:0,81,1086	0/0:22,0:22:40.45:0,40,827	0/0:24,0:24:72.17:0,72,925	0/0:41,0:41:99:0,111,1573	1/1:1,37:38:99:1436,105,0	0/0:25,0:25:75.21:0,75,946	0/0:26,0:26:75.19:0,75,996	0/0:36,0:36:99:0,108,1392	0/0:21,0:21:63.16:0,63,838	1/1:22,0:22:54.33:691,54,0	1/1:22,0:22:33.42:627,33,0	0/0:25,0:25:72.67:0,73,987	0/0:37,0:37:99:0,111,1492	0/0:40,0:40:99:0,120,1682	0/0:5,0:5:15.05:0,15,211
chr10	70442871	.	CT	C	913.40	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.226;DP=693;FS=1.614;HRun=2;HaplotypeScore=85.5060;InbreedingCoeff=0.9420;MQ=63.95;MQ0=0;MQRankSum=-2.862;QD=28.54;ReadPosRankSum=2.190;VQSLOD=3.3940;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,29:32:78.25:1008,78,0	0/0:4,0:4:12.04:0,12,180	0/0:25,0:23:57.19:0,57,838	0/0:25,0:23:57.15:0,57,794	0/0:24,0:24:66.20:0,66,968	0/0:23,0:23:69.22:0,69,1010	0/0:21,0:21:63.19:0,63,903	0/0:34,0:34:99:0,102,1496	0/0:26,0:26:78.22:0,78,1108	0/0:25,0:25:72.24:0,72,1061	0/0:18,0:18:54.17:0,54,790	0/0:25,0:25:75.24:0,75,1105	0/0:12,0:12:33.10:0,33,473	0/0:28,0:28:84.21:0,84,1156	0/0:21,0:21:63.20:0,63,924	0/0:20,0:20:60.20:0,60,899	0/0:43,0:43:99:0,123,1758	0/0:39,0:39:99:0,108,1548	0/0:25,0:25:75.24:0,75,1101	0/0:23,0:23:66.22:0,66,989	0/0:35,0:35:99:0,105,1481	0/0:20,0:20:60.19:0,60,880	0/0:21,0:21:63.20:0,63,917	0/0:20,0:20:54.17:0,54,786	0/0:23,0:23:69.21:0,69,997	0/0:36,0:36:99:0,108,1580	0/0:41,0:41:99:0,123,1797	0/0:4,0:4:12.04:0,12,180
chr10	70444065	.	C	CCT	85.11	PASS	AB=1.000;AC=8;AF=0.167;AN=48;BaseQRankSum=-0.933;DP=682;FS=15.218;HRun=0;HaplotypeScore=116.6992;InbreedingCoeff=0.1009;MQ=65.94;MQ0=28;MQRankSum=-1.261;QD=0.55;ReadPosRankSum=-0.284;VQSLOD=1.1778;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:8.72:0,9,58	0/0:12,0:11:3:0,3,25	./.	./.	0/0:13,0:11:5.59:0,6,35	0/0:18,0:16:5.56:0,6,36	0/0:26,0:25:12.31:0,12,90	./.	0/0:24,0:23:14.64:0,15,106	0/1:25,0:25:38.51:39,0,68	0/0:14,0:14:2.71:0,3,14	0/1:30,0:30:44.08:44,0,45	0/0:21,0:20:14.84:0,15,104	0/0:32,0:31:28.03:0,28,202	0/0:30,8:39:20.44:0,20,134	0/0:28,0:26:14.48:0,14,116	0/0:32,0:30:37.62:0,38,276	0/0:15,0:16:8.84:0,9,60	1/1:17,0:17:10.63:83,11,0	./.	0/1:33,0:31:25.99:26,0,32	0/1:18,0:18:8.08:8,0,61	0/1:12,0:12:3.51:4,0,31	0/0:36,0:37:32.30:0,32,228	0/0:14,0:14:14.92:0,15,112	0/0:33,0:32:14.36:0,14,81	0/1:19,0:18:0:0,0,0	0/0:14,0:12:2.65:0,3,12
chr10	70444128	.	GTGTGTGTGTGTGTGTC	G	469.98	PASS	AB=0.730;AC=5;AF=0.093;AN=54;BaseQRankSum=5.173;DP=599;FS=2.065;HRun=0;HaplotypeScore=207.7543;InbreedingCoeff=0.2884;MQ=47.04;MQ0=36;MQRankSum=-3.660;QD=5.28;ReadPosRankSum=-2.445;VQSLOD=2.5908;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:7:15.05:0,15,917	0/0:10,0:5:13.60:0,14,444	0/0:15,0:6:15.80:0,16,331	0/0:25,0:23:39.13:0,39,2039	0/0:27,0:26:57.18:0,57,3352	0/0:28,0:25:33.48:0,33,2026	0/0:30,0:25:63.63:0,64,2583	0/0:25,0:23:36.08:0,36,1630	0/0:21,0:19:48.10:0,48,2216	0/0:16,0:15:17.95:0,18,838	0/0:20,0:19:39.57:0,40,1980	0/1:5,16:20:16.49:421,0,16	0/0:26,0:26:43.71:0,44,1648	0/0:22,0:20:39.12:0,39,1716	0/0:29,0:29:69.70:0,70,3378	0/0:35,0:32:73.44:0,73,3509	0/1:14,0:14:23.64:24,0,37	0/0:11,0:11:27.06:0,27,895	0/0:10,0:9:17.90:0,18,715	0/0:30,0:23:33.11:0,33,1360	0/0:24,0:24:20.60:0,21,1111	1/1:12,0:13:8.28:112,8,0	0/1:16,25:40:29.26:29,0,703	0/0:15,0:15:26.90:0,27,1064	0/0:36,0:33:94.56:0,95,2941	0/0:15,0:13:26.90:0,27,1255	0/0:14,0:11:33.11:0,33,1080
chr10	70444144	.	CTGTGTCTG	C	176.71	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=4.595;DP=604;FS=1.517;HRun=0;HaplotypeScore=153.4092;InbreedingCoeff=0.5493;MQ=54.27;MQ0=26;MQRankSum=-2.355;QD=6.09;ReadPosRankSum=0.639;VQSLOD=2.0769;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:12.03:0,12,250	0/0:8,0:8:21.05:0,21,698	0/0:33,0:15:28.21:0,28,929	0/0:27,0:17:39.19:0,39,792	0/0:23,0:22:47.63:0,48,1493	0/0:27,0:26:68.99:0,69,2375	0/0:27,0:26:54.08:0,54,1699	0/0:32,0:29:84.29:0,84,2355	0/0:22,0:20:39.13:0,39,1328	0/0:18,0:17:48.16:0,48,1512	0/0:19,0:18:33.04:0,33,904	0/0:23,0:22:51.49:0,51,1581	0/1:16,0:16:22.95:85,0,23	0/0:27,0:27:57.27:0,57,1513	0/0:18,0:17:39.13:0,39,1296	0/0:27,0:27:65.63:0,66,2129	0/0:31,0:29:80.79:0,81,2454	1/1:1,12:13:8.99:189,9,0	0/0:15,0:15:41.60:0,42,576	0/0:17,0:16:36.16:0,36,534	0/0:28,0:22:41.40:0,41,758	0/0:19,0:19:26.47:0,26,918	0/0:12,0:12:17.73:0,18,138	0/0:32,0:31:8.68:0,9,372	0/0:9,0:9:21.07:0,21,743	0/0:32,0:29:69.08:0,69,1443	0/0:16,0:15:44.73:0,45,823	0/0:13,0:12:29.78:0,30,587
chr10	70445008	.	TGA	T	1142.24	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.869;DP=654;FS=3.517;HRun=0;HaplotypeScore=76.2370;InbreedingCoeff=0.9920;MQ=92.70;MQ0=1;MQRankSum=-4.054;QD=34.61;ReadPosRankSum=1.532;VQSLOD=5.9538;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:32:84.28:1237,84,0	0/0:17,0:17:48.15:0,48,868	0/0:21,0:21:63.20:0,63,1043	0/0:34,0:34:90.24:0,90,1585	0/0:34,0:34:99:0,102,1878	0/0:25,0:25:72.25:0,72,1348	0/0:24,0:24:72.25:0,72,1327	0/0:31,0:31:93.32:0,93,1716	0/0:15,0:15:45.15:0,45,835	0/0:29,0:29:84.29:0,84,1574	0/0:19,0:19:57.18:0,57,1037	0/0:24,0:24:72.25:0,72,1348	0/0:24,0:24:72.23:0,72,1312	0/0:23,0:23:69.24:0,69,1292	0/0:30,0:30:87.30:0,87,1629	0/0:17,0:17:51.16:0,51,924	0/0:21,0:21:60.21:0,60,1124	0/0:17,0:17:51.17:0,51,955	0/0:27,0:27:75.25:0,75,1366	0/0:28,0:28:78.25:0,78,1429	0/0:31,0:31:90.29:0,90,1645	0/0:31,0:31:93.32:0,93,1734	0/0:16,0:16:45.15:0,45,834	0/0:18,0:18:51.17:0,51,937	0/0:27,0:27:81.28:0,81,1517	0/0:17,0:17:51.17:0,51,944	0/0:15,0:15:45.10:0,45,805	0/0:6,0:6:18.06:0,18,337
chr10	70447305	.	TAC	T	1608.60	PASS	AB=0.962;AC=9;AF=0.161;AN=56;BaseQRankSum=9.382;DP=680;FS=3.159;HRun=0;HaplotypeScore=85.6706;InbreedingCoeff=0.7016;MQ=72.20;MQ0=1;MQRankSum=-1.206;QD=7.89;ReadPosRankSum=1.838;VQSLOD=3.3092;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,1:53:89.21:0,89,1941	0/0:8,0:8:18.06:0,18,295	0/1:39,1:32:3.85:4,0,549	0/1:34,1:29:0.48:0,0,705	0/0:22,0:22:57.18:0,57,909	0/0:19,0:19:48.16:0,48,787	0/0:26,0:26:57.18:0,57,924	0/0:36,0:36:75.22:0,75,1140	0/0:18,0:18:42.14:0,42,689	0/0:23,1:24:19.98:0,20,820	0/0:15,0:15:39.12:0,39,610	0/0:26,0:26:66.22:0,66,1043	1/1:5,15:21:45.61:559,46,0	0/0:16,0:16:39.12:0,39,615	0/0:21,0:21:50.76:0,51,798	0/0:23,0:23:60.19:0,60,955	0/0:27,0:27:60.20:0,60,967	0/0:11,0:10:30.10:0,30,481	0/0:24,0:24:48.15:0,48,741	0/0:24,0:24:66.19:0,66,1025	0/1:57,4:61:4.27:4,0,1938	0/0:22,0:22:48.10:0,48,751	1/1:3,13:16:35.94:423,36,0	1/1:9,22:31:63.16:764,63,0	0/0:9,0:9:21.07:0,21,344	0/0:30,0:30:72.23:0,72,1123	0/0:18,0:17:42.14:0,42,683	0/0:4,0:4:11.99:0,12,142
chr10	70448336	.	TC	T	1128.71	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.763;DP=625;FS=24.877;HRun=4;HaplotypeScore=62.7326;InbreedingCoeff=0.9992;MQ=78.04;MQ0=0;MQRankSum=-3.288;QD=25.08;ReadPosRankSum=2.167;VQSLOD=1.9611;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,41:45:99:1224,102,0	0/0:13,0:13:39.08:0,39,501	0/0:16,0:15:41.99:0,42,484	0/0:20,0:21:41.87:0,42,574	0/0:25,0:25:75.25:0,75,1034	0/0:20,0:20:60.19:0,60,823	0/0:23,0:23:54.14:0,54,703	0/0:27,0:27:72.23:0,72,993	0/0:16,0:16:42.11:0,42,553	0/0:28,0:28:71.92:0,72,952	0/0:16,0:16:48.16:0,48,671	0/0:29,0:29:84.24:0,84,1123	0/0:21,0:21:60.17:0,60,805	0/0:21,0:21:60.20:0,60,839	0/0:24,0:24:69.22:0,69,949	0/0:27,0:27:81.24:0,81,1094	0/0:31,0:31:90.27:0,90,1236	0/0:13,0:13:36.09:0,36,469	0/0:28,0:28:63.19:0,63,864	0/0:17,0:17:48.16:0,48,668	0/0:27,0:27:72.23:0,72,990	0/0:13,0:13:36.09:0,36,465	0/0:16,0:16:45.13:0,45,610	0/0:38,0:38:88.91:0,89,1249	0/0:13,0:13:36.12:0,36,499	0/0:22,0:22:66.22:0,66,921	0/0:24,0:24:72.24:0,72,1003	0/0:11,0:11:33.11:0,33,461
chr10	70448821	.	GAGTC	G	2427.17	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.363;DP=595;FS=4.729;HRun=0;HaplotypeScore=111.9250;InbreedingCoeff=0.9708;MQ=90.36;MQ0=0;MQRankSum=-4.112;QD=44.13;ReadPosRankSum=4.104;VQSLOD=4.1987;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,2274	0/0:7,0:7:21.07:0,21,588	0/0:27,0:26:69.39:0,69,1848	0/0:38,0:36:83.99:0,84,2109	0/0:10,0:10:30.09:0,30,733	0/0:13,0:13:39.13:0,39,1129	0/0:29,0:29:84.29:0,84,2268	0/0:42,0:42:99:0,123,3350	0/0:21,0:21:63.22:0,63,1814	0/0:13,0:13:39.13:0,39,1129	0/0:8,0:8:24.08:0,24,641	0/0:29,0:29:84.28:0,84,2288	1/1:0,18:19:51.17:1065,51,0	0/0:26,0:26:75.26:0,75,2171	0/0:39,0:39:99:0,117,3310	0/0:23,0:23:69.24:0,69,1942	0/0:41,0:41:99:0,123,3453	0/0:14,0:14:39.13:0,39,755	0/0:24,0:24:66.22:0,66,1780	0/0:7,0:7:18.06:0,18,478	0/0:42,0:42:99:0,123,3563	0/0:13,0:13:39.13:0,39,1128	1/1:0,9:10:17.75:372,18,0	1/1:0,26:26:53.94:1132,54,0	0/0:9,0:9:27.09:0,27,753	0/0:12,0:12:33.10:0,33,896	0/0:11,0:11:33.11:0,33,884	0/0:3,0:3:9.03:0,9,261
chr10	70449126	.	T	TCA	704	PASS	AB=0.946;AC=18;AF=0.429;AN=42;BaseQRankSum=-1.721;DP=542;FS=3.617;HRun=0;HaplotypeScore=80.4690;InbreedingCoeff=0.1029;MQ=67.95;MQ0=10;MQRankSum=-0.791;QD=2.63;ReadPosRankSum=-2.635;VQSLOD=1.4871;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:2.74:0,3,12	./.	./.	./.	0/1:15,0:15:25.88:36,0,26	./.	0/1:34,1:37:26.33:26,0,106	./.	0/1:18,1:20:31.88:32,0,84	1/1:12,0:12:1.25:3,1,0	0/1:6,0:6:0:0,0,0	1/1:11,7:20:3.01:44,3,0	0/0:13,0:17:5.35:0,5,28	0/0:19,0:19:11.74:0,12,93	0/0:27,0:27:14.81:0,15,152	0/1:12,7:22:10.79:242,0,11	0/0:15,0:15:6.01:0,6,64	0/1:16,0:16:18.32:18,0,84	0/1:18,0:18:0:0,0,0	./.	1/1:31,1:32:24.01:256,24,0	0/0:16,0:18:4.65:0,5,19	0/0:8,0:9:2.84:0,3,14	0/1:25,0:28:8.17:8,0,48	0/0:12,0:11:2.78:0,3,13	1/1:25,0:24:12.89:123,13,0	1/1:12,4:17:3.01:44,3,0	./.
chr10	70449380	.	T	TG	1380.41	PASS	AB=0.765;AC=8;AF=0.143;AN=56;BaseQRankSum=-4.629;DP=624;FS=2.435;HRun=9;HaplotypeScore=72.8957;InbreedingCoeff=0.7729;MQ=81.92;MQ0=0;MQRankSum=-2.032;QD=12.33;ReadPosRankSum=1.765;VQSLOD=3.4680;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,22:29:19.11:439,19,0	0/0:9,0:9:23.99:0,24,208	0/0:27,0:26:33.90:0,34,286	0/0:28,0:27:22.75:0,23,249	0/0:22,0:22:38.94:0,39,331	0/1:22,1:23:36.22:36,0,96	0/0:36,0:36:50.70:0,51,658	0/0:22,1:23:50.85:0,51,428	0/0:28,0:28:74.92:0,75,640	0/0:21,0:21:50.92:0,51,434	0/0:10,0:10:20.97:0,21,179	0/0:27,0:27:65.97:0,66,570	1/1:3,16:19:36.10:398,36,0	0/0:25,0:26:53.94:0,54,468	0/0:28,0:28:68.92:0,69,589	0/0:15,0:15:44.99:0,45,390	0/0:26,0:26:71.95:0,72,620	0/0:20,1:21:14.74:0,15,348	0/0:16,0:17:46.97:0,47,385	0/0:13,0:13:38.99:0,39,338	0/0:36,0:36:86.95:0,87,750	0/0:25,0:25:29.59:0,30,418	1/1:3,14:17:20.89:214,21,0	0/1:6,18:24:0.96:447,0,1	0/0:27,0:27:57.41:0,57,539	0/0:21,0:21:56.98:0,57,492	0/0:18,0:18:44.87:0,45,370	0/0:7,0:7:20.95:0,21,174
chr10	70451607	.	TCTTCCCAG	T	1047.19	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.541;DP=650;FS=0.000;HRun=0;HaplotypeScore=160.2869;InbreedingCoeff=0.8505;MQ=76.22;MQ0=0;MQRankSum=-6.125;QD=45.53;ReadPosRankSum=0.598;VQSLOD=3.5226;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.32:0,93,4095	0/0:16,0:16:48.16:0,48,2064	0/0:18,0:18:51.17:0,51,1967	0/0:12,0:12:30.09:0,30,1096	0/0:27,0:27:69.24:0,69,3056	0/0:16,0:16:48.16:0,48,2058	0/0:33,0:33:96.32:0,96,4026	0/0:17,0:17:51.16:0,51,2073	0/0:24,0:24:72.25:0,72,3261	0/0:18,0:18:54.19:0,54,2420	0/0:16,0:16:48.16:0,48,2020	0/0:26,0:26:78.27:0,78,3532	0/0:31,0:31:93.32:0,93,4110	0/0:20,0:20:57.20:0,57,2528	0/0:26,0:26:78.27:0,78,3490	0/0:25,0:25:75.26:0,75,3196	0/0:39,0:39:99:0,117,4938	1/1:5,18:23:39.13:1142,39,0	0/0:17,0:17:51.18:0,51,2190	0/0:25,0:25:72.25:0,72,3165	0/0:34,0:34:99:0,102,4439	0/0:24,0:24:72.25:0,72,2986	0/0:21,0:21:60.66:0,61,2607	0/0:23,0:23:69.22:0,69,2970	0/0:23,0:23:69.24:0,69,2964	0/0:31,0:31:93.32:0,93,4148	0/0:33,0:33:96.27:0,96,3966	0/0:1,0:1:3.01:0,3,136
chr10	70455687	.	C	CTCTCT	4155.34	PASS	AB=0.649;AC=14;AF=0.250;AN=56;BaseQRankSum=11.717;DP=655;FS=11.431;HRun=0;HaplotypeScore=166.9434;InbreedingCoeff=0.6398;MQ=94.45;MQ0=0;MQRankSum=-11.267;QD=53.27;ReadPosRankSum=4.942;VQSLOD=3.1301;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,145,3428	0/0:8,0:8:24.08:0,24,559	0/0:30,0:30:83.49:0,83,1789	0/0:37,0:37:99:0,99,2034	0/0:19,0:19:54.19:0,54,1257	0/0:20,0:20:60.19:0,60,1330	0/0:31,0:31:93.32:0,93,1987	0/0:40,0:40:99:0,111,2430	0/0:27,0:27:78.27:0,78,1769	0/0:31,0:31:90.31:0,90,2059	0/0:17,0:17:48.16:0,48,1033	0/0:39,0:39:99:0,117,2679	1/1:2,8:10:17.06:680,17,0	0/0:27,0:27:75.24:0,75,1677	0/0:43,0:43:99:0,120,2617	0/0:39,0:39:99:0,117,2704	0/0:25,0:25:72.25:0,72,1588	0/0:28,0:28:84.29:0,84,1902	0/1:1,3:4:9.59:229,0,10	1/1:0,6:6:18.06:473,18,0	0/1:10,2:13:45.90:226,0,46	0/0:26,0:26:75.25:0,75,1681	1/1:0,5:5:15.05:340,15,0	0/1:5,6:11:6.68:344,0,7	0/0:32,0:32:93.32:0,93,2165	0/1:3,10:13:20.48:759,0,20	1/1:0,8:11:27.09:704,27,0	1/1:0,5:5:15.05:400,15,0
chr10	70455688	.	A	AGTACACGGGGCTTCC	19889.02	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.270;DP=737;FS=0.728;HRun=0;HaplotypeScore=321.1525;InbreedingCoeff=0.9993;MQ=89.21;MQ0=0;MQRankSum=-16.808;QD=127.49;ReadPosRankSum=0.491;VQSLOD=4.2967;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,162,5901	0/0:9,0:9:24.08:0,24,1117	0/0:30,0:30:87.24:0,87,3356	0/0:37,0:37:99:0,99,3322	0/0:19,0:19:54.19:0,54,2350	0/0:21,0:21:60.12:0,60,2436	0/0:32,0:32:93.31:0,93,3304	0/0:39,0:39:99:0,114,4176	0/0:27,0:27:78.24:0,78,3313	0/0:32,0:32:93.30:0,93,3738	0/0:17,0:17:48.16:0,48,1780	0/0:39,0:39:99:0,117,5086	1/1:13,8:21:58.32:3085,58,0	0/0:27,0:27:78.24:0,78,3079	0/0:42,0:42:99:0,126,4876	0/0:39,0:39:99:0,117,5208	0/0:25,0:25:75.22:0,75,2800	0/0:28,0:28:84.25:0,84,3589	1/1:7,3:10:30.10:1467,30,0	1/1:7,6:13:39.13:2037,39,0	1/1:20,2:22:27.89:1158,28,0	0/0:26,0:26:78.25:0,78,3366	1/1:9,5:14:39.13:1621,39,0	1/1:15,6:21:29.43:1292,29,0	0/0:33,0:33:93.32:0,93,4221	1/1:13,10:23:66.22:3826,66,0	1/1:14,7:22:60.21:3426,60,0	1/1:5,5:10:30.10:1977,30,0
chr10	70456004	.	TG	T	4945.32	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.882;DP=708;FS=9.703;HRun=1;HaplotypeScore=68.0390;InbreedingCoeff=0.9991;MQ=82.59;MQ0=0;MQRankSum=-1.156;QD=40.87;ReadPosRankSum=1.097;VQSLOD=5.0391;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,181,2821	0/0:12,0:12:36.10:0,36,542	0/0:20,0:20:59.41:0,59,915	0/0:22,0:22:63.21:0,63,1004	0/0:19,0:19:57.18:0,57,887	0/0:29,0:29:87.30:0,87,1383	0/0:26,0:26:78.25:0,78,1216	0/0:30,0:30:90.31:0,90,1438	0/0:20,0:20:60.18:0,60,912	0/0:36,0:36:99:0,108,1680	0/0:14,0:14:42.14:0,42,670	0/0:26,0:26:78.25:0,78,1215	0/0:30,0:30:90.29:0,90,1415	0/0:22,0:22:66.22:0,66,1051	0/0:38,0:38:99:0,114,1753	0/0:25,0:25:72.24:0,72,1135	0/0:39,0:39:99:0,117,1817	0/0:30,0:30:90.31:0,90,1435	1/1:0,17:17:51.14:692,51,0	1/1:0,16:16:48.16:671,48,0	1/1:0,37:37:99:1510,108,0	0/0:22,0:22:63.21:0,63,1007	0/0:14,0:14:42.13:0,42,647	0/0:28,0:28:81.26:0,81,1264	0/0:25,0:25:75.26:0,75,1196	1/1:0,23:23:69.20:940,69,0	1/1:0,21:21:60.20:839,60,0	1/1:0,7:7:21.07:293,21,0
chr10	70459376	.	T	TAA	1774.14	PASS	AB=0.667;AC=11;AF=0.196;AN=56;BaseQRankSum=-4.158;DP=453;FS=0.000;HRun=10;HaplotypeScore=63.6199;InbreedingCoeff=0.8289;MQ=61.60;MQ0=15;MQRankSum=-2.445;QD=19.50;ReadPosRankSum=-2.925;VQSLOD=1.8048;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:63.09:0,63,641	0/0:15,0:15:45.10:0,45,458	0/0:9,0:7:11.93:0,12,100	0/0:4,0:4:8.45:0,8,74	0/0:31,0:31:81.22:0,81,840	0/0:16,0:16:36.07:0,36,366	0/0:11,0:9:21.04:0,21,213	0/0:31,0:22:48.05:0,48,488	0/0:13,0:13:36.08:0,36,366	0/0:20,0:21:38.87:0,39,439	0/0:17,0:17:48.09:0,48,482	0/0:15,0:15:39.07:0,39,390	0/0:12,0:12:13.21:0,13,44	0/0:12,0:13:32.56:0,33,314	0/0:19,0:18:54.11:0,54,548	0/0:20,0:19:48.08:0,48,488	0/0:21,0:18:33.03:0,33,335	0/0:16,0:14:21.60:0,22,266	1/1:9,14:23:44.01:518,44,0	1/1:3,17:20:39.13:581,39,0	1/1:0,5:5:9.03:134,9,0	0/0:6,0:6:15.03:0,15,153	0/0:12,0:12:17.68:0,18,55	0/0:7,0:6:9.65:0,10,28	0/0:25,0:24:59.83:0,60,597	1/1:6,11:19:34.41:449,34,0	0/1:6,5:12:46.43:83,0,46	1/1:1,7:8:14.54:183,15,0
chr10	70459383	.	A	AG	935.24	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.193;DP=445;FS=6.127;HRun=0;HaplotypeScore=54.0884;InbreedingCoeff=0.9174;MQ=62.99;MQ0=12;MQRankSum=0.741;QD=28.34;ReadPosRankSum=2.519;VQSLOD=3.8791;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.14:0,72,941	0/0:16,0:16:45.15:0,45,628	0/0:10,0:8:18.77:0,19,160	0/0:4,0:4:8.96:0,9,103	0/0:32,0:32:87.27:0,87,1183	0/0:15,0:15:36.12:0,36,501	0/0:10,0:9:27.05:0,27,339	0/0:33,0:25:66.17:0,66,829	0/0:12,0:12:36.12:0,36,501	0/0:20,0:20:43.99:0,44,689	0/0:17,0:17:51.16:0,51,697	0/0:14,0:14:42.13:0,42,571	1/1:1,13:14:30.10:417,30,0	0/0:12,0:12:35.99:0,36,454	0/0:21,0:20:60.14:0,60,790	0/0:18,0:18:54.13:0,54,715	0/0:19,0:19:45.07:0,45,556	0/0:14,0:13:30.01:0,30,390	0/0:24,0:21:43.99:0,44,270	0/0:18,0:18:34.25:0,34,196	0/0:5,0:5:8.79:0,9,52	0/0:6,0:6:18.05:0,18,237	1/1:0,12:12:30.10:418,30,0	1/1:1,6:6:18.06:242,18,0	0/0:24,0:23:66.17:0,66,873	0/0:18,0:18:40.78:0,41,269	0/0:13,0:13:11.58:0,12,120	0/0:9,0:8:8.42:0,8,60
chr10	70459937	.	TGG	T	1647.60	PASS	AB=0.652;AC=13;AF=0.232;AN=56;BaseQRankSum=1.024;DP=468;FS=13.035;HRun=11;HaplotypeScore=70.0413;InbreedingCoeff=0.8057;MQ=79.58;MQ0=0;MQRankSum=-1.627;QD=14.84;ReadPosRankSum=3.883;VQSLOD=0.7329;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:20:38.55:0,39,453	0/0:6,0:6:12.48:0,12,130	0/0:18,0:20:19.70:0,20,226	0/0:11,0:11:1.22:0,1,140	0/0:16,0:16:12.03:0,12,146	0/0:17,0:17:26.25:0,26,374	0/0:19,0:22:41.03:0,41,478	0/0:17,0:17:15:0,15,180	0/0:9,0:9:27.05:0,27,368	0/0:12,0:13:11.50:0,12,128	0/0:8,0:10:11.51:0,12,125	0/0:11,0:13:21.43:0,21,266	0/0:3,0:18:27.70:0,28,110	0/0:17,0:17:29.96:0,30,409	0/0:17,0:17:30.09:0,30,436	0/0:19,0:24:55.56:0,56,655	0/0:34,0:35:71.65:0,72,927	0/0:13,1:18:4.05:0,4,305	1/1:5,11:16:30.03:318,30,0	1/1:9,9:18:24.01:255,24,0	1/1:7,15:22:39.09:415,39,0	0/0:22,0:22:21.05:0,21,295	0/1:7,1:15:16.45:16,0,27	0/0:1,0:19:42.92:0,43,161	0/0:10,0:12:16.98:0,17,135	1/1:6,12:18:30.03:319,30,0	1/1:2,13:15:30.07:319,30,0	1/1:2,5:7:18.04:191,18,0
chr10	70463790	.	GT	G	4047.30	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.999;DP=550;FS=8.029;HRun=1;HaplotypeScore=75.6557;InbreedingCoeff=0.9993;MQ=86.25;MQ0=0;MQRankSum=-1.863;QD=37.47;ReadPosRankSum=0.351;VQSLOD=3.7895;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1582	0/0:10,0:10:30.10:0,30,479	0/0:24,0:24:72.23:0,72,1118	0/0:13,0:13:36.07:0,36,527	0/0:25,0:25:75.26:0,75,1199	0/0:19,0:19:57.19:0,57,909	0/0:14,0:14:42.14:0,42,664	0/0:31,0:31:93.30:0,93,1445	0/0:21,0:21:62.70:0,63,961	0/0:20,0:20:57.19:0,57,888	0/0:29,0:29:87.28:0,87,1360	0/0:15,0:15:39.11:0,39,590	0/0:18,0:18:54.17:0,54,839	0/0:8,0:8:24.08:0,24,384	0/0:20,0:20:60.19:0,60,936	0/0:13,0:13:39.12:0,39,601	0/0:23,0:23:66.21:0,66,1031	0/0:28,0:28:84.29:0,84,1342	1/1:1,15:16:45.15:583,45,0	1/1:0,19:19:54.18:701,54,0	1/1:0,12:12:33.11:427,33,0	0/0:21,0:21:63.19:0,63,973	0/0:22,0:22:66.23:0,66,1054	0/0:13,0:13:39.09:0,39,589	0/0:22,0:22:66.21:0,66,1032	1/1:0,28:28:84.27:1090,84,0	1/1:0,23:23:66.21:857,66,0	1/1:0,10:10:30.10:389,30,0
chr10	70464535	.	AT	A	1628.71	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.623;DP=612;FS=0.000;HRun=9;HaplotypeScore=57.6504;InbreedingCoeff=0.9953;MQ=84.38;MQ0=0;MQRankSum=-3.683;QD=22.94;ReadPosRankSum=2.136;VQSLOD=4.4365;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,48:49:99:1236,135,0	0/0:9,0:9:21.04:0,21,230	0/0:26,0:26:50.78:0,51,528	0/0:17,0:16:41.54:0,42,438	0/0:31,0:31:93.26:0,93,1062	0/0:33,0:33:93.26:0,93,1061	0/0:23,0:23:60.18:0,60,692	0/0:26,0:26:63.17:0,63,712	0/0:10,0:11:32.91:0,33,350	0/0:27,0:27:72.21:0,72,831	0/0:11,0:11:30.09:0,30,346	0/0:23,1:24:38.80:0,39,691	0/0:19,0:19:51.13:0,51,575	0/0:21,0:21:57.16:0,57,650	0/0:26,0:26:78.23:0,78,900	0/0:22,0:22:63.18:0,63,717	0/0:29,0:29:69.17:0,69,774	1/1:1,21:22:28.42:515,28,0	0/0:22,0:22:63.19:0,63,727	0/0:19,0:19:48.14:0,48,552	0/0:18,0:18:48.14:0,48,554	0/0:23,0:23:66.17:0,66,735	0/0:20,1:21:32.71:0,33,630	0/0:9,0:9:27.06:0,27,301	0/0:15,0:15:45.12:0,45,511	0/0:27,0:27:72.21:0,72,831	0/0:20,0:19:60.18:0,60,692	0/0:11,0:11:24.07:0,24,277
chr10	70465993	.	CA	C	5341.87	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.427;DP=776;FS=11.319;HRun=2;HaplotypeScore=73.3591;InbreedingCoeff=0.9870;MQ=78.13;MQ0=1;MQRankSum=-2.342;QD=34.02;ReadPosRankSum=2.249;VQSLOD=4.4176;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,172,2521	0/0:10,0:10:30.07:0,30,426	0/0:22,0:22:66.22:0,66,952	0/0:23,0:23:56.33:0,56,765	0/0:21,0:21:63.21:0,63,943	0/0:23,0:23:69.22:0,69,1013	0/0:43,0:43:99:0,126,1851	0/0:23,0:23:60.19:0,60,881	0/0:19,0:19:57.17:0,57,805	0/0:37,0:37:99:0,102,1529	0/0:14,0:14:42.13:0,42,611	0/0:39,0:39:99:0,114,1691	0/0:34,0:34:99:0,102,1508	0/0:18,0:18:54.18:0,54,810	0/0:41,0:41:99:0,123,1823	0/0:27,0:27:81.27:0,81,1214	0/0:40,0:40:99:0,120,1797	0/0:42,0:42:99:0,126,1864	1/1:0,17:17:51.17:662,51,0	1/1:0,16:16:33.11:429,33,0	1/1:0,70:69:99:2493,193,0	0/0:15,0:15:45.15:0,45,673	0/0:16,0:16:48.16:0,48,719	0/0:29,0:29:87.29:0,87,1304	0/0:23,0:23:69.23:0,69,1034	1/1:3,29:32:20.40:1057,20,0	1/1:0,17:17:45.15:584,45,0	1/1:0,5:5:9.03:117,9,0
chr10	70466501	.	TGGGG	T	4700.97	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=8.384;DP=543;FS=20.899;HRun=13;HaplotypeScore=114.9800;InbreedingCoeff=0.9247;MQ=77.53;MQ0=3;MQRankSum=-2.947;QD=20.00;ReadPosRankSum=11.109;VQSLOD=0.3125;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:4,36:39:87.27:1272,87,0	0/0:4,0:4:6.02:0,6,131	0/0:17,0:16:29.83:0,30,501	0/0:24,0:20:22.19:0,22,450	0/0:15,0:20:26.96:0,27,415	0/0:14,0:16:17.99:0,18,304	0/0:21,0:21:46.40:0,46,890	0/0:9,0:9:18.03:0,18,227	0/0:18,0:18:24.08:0,24,491	0/0:19,0:20:15.02:0,15,220	0/0:3,0:6:3.01:0,3,37	0/0:16,0:17:31.52:0,32,437	1/1:2,24:26:63.18:901,63,0	0/0:14,0:14:21.07:0,21,396	0/0:27,0:30:54.18:0,54,1058	0/0:19,0:20:30.09:0,30,607	0/0:22,0:24:31.06:0,31,649	0/0:10,0:15:23.84:0,24,261	1/1:10,0:20:22.19:188,22,0	1/1:2,0:16:19.29:176,19,0	1/1:7,1:33:61.21:394,61,0	0/0:11,0:17:13.59:0,14,152	1/1:9,17:26:41.65:590,42,0	1/1:8,20:29:40.31:574,40,0	0/0:14,0:15:5.33:0,5,101	1/1:2,0:20:52.60:335,53,0	1/1:5,1:15:12.11:170,12,0	1/1:3,0:9:17.33:100,17,0
chr10	70470483	.	C	CT	778.12	PASS	AB=0.751;AC=5;AF=0.089;AN=56;BaseQRankSum=7.149;DP=526;FS=21.358;HRun=1;HaplotypeScore=72.5697;InbreedingCoeff=-0.1122;MQ=78.90;MQ0=6;MQRankSum=-4.437;QD=8.19;ReadPosRankSum=-1.120;VQSLOD=-0.6036;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,4:24:47.98:0,48,565	0/0:11,0:11:27.09:0,27,363	0/0:35,0:23:58.64:0,59,674	0/0:42,0:31:77.86:0,78,866	0/0:9,0:9:24.07:0,24,312	0/0:16,0:16:48.13:0,48,621	0/0:18,0:18:51:0,51,607	0/0:20,0:20:57.10:0,57,740	0/0:23,0:23:62.95:0,63,838	0/0:25,0:25:75.15:0,75,956	0/0:13,0:13:36.11:0,36,469	0/0:22,0:22:56.79:0,57,759	0/1:10,5:15:99:207,0,153	0/0:23,0:22:63.12:0,63,802	0/0:24,0:24:62.70:0,63,799	0/0:20,0:20:57.16:0,57,760	0/0:24,0:24:66.06:0,66,793	0/0:9,0:9:13.29:0,13,167	0/1:18,4:21:99:104,0,581	0/1:11,4:15:72.05:72,0,181	0/0:9,2:11:21.03:0,21,281	0/0:7,0:7:21.06:0,21,268	0/0:18,0:18:11.72:0,12,179	0/0:16,0:16:0.64:0,1,197	0/0:15,0:15:44.97:0,45,576	0/1:10,12:19:99:345,0,273	0/1:13,8:21:99:167,0,414	0/0:5,0:4:12.04:0,12,160
chr10	70473118	.	T	TA	4243.66	PASS	AB=0.619;AC=21;AF=0.375;AN=56;BaseQRankSum=4.060;DP=639;FS=2.492;HRun=11;HaplotypeScore=79.8396;InbreedingCoeff=0.8750;MQ=72.49;MQ0=0;MQRankSum=-1.068;QD=16.38;ReadPosRankSum=1.903;VQSLOD=5.8287;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,1:44:91.06:471,91,0	0/0:12,0:13:31.91:0,32,238	0/0:15,1:14:16.59:0,17,95	0/0:20,0:19:17.79:0,18,162	0/0:17,0:17:38.74:0,39,295	0/0:15,1:16:11.36:0,11,269	0/0:17,0:19:46.83:0,47,351	0/0:41,0:42:73.67:0,74,561	0/0:22,1:23:32.32:0,32,434	0/0:29,0:29:71.68:0,72,556	0/0:19,1:20:17.43:0,17,314	0/0:27,0:29:51.82:0,52,383	1/1:1,17:18:44.97:455,45,0	0/0:16,0:16:35.82:0,36,277	0/0:23,0:25:55.80:0,56,423	0/0:21,1:24:16.41:0,16,300	0/0:19,0:23:50.83:0,51,352	1/1:2,1:17:25.67:132,26,0	1/1:9,12:21:35.95:344,36,0	1/1:7,25:32:24.78:575,25,0	1/1:3,9:12:27.05:274,27,0	0/0:25,2:27:21.60:0,22,458	1/1:5,20:26:47.93:471,48,0	1/1:5,17:22:1.62:380,2,0	0/0:19,0:19:41.80:0,42,325	0/1:10,16:26:12.61:420,0,13	1/1:5,26:31:45.53:630,46,0	1/1:7,3:10:9.02:91,9,0
chr10	70474140	.	CACT	C	2745.13	PASS	AB=1.000;AC=28;AF=0.560;AN=50;BaseQRankSum=0.088;DP=610;FS=4.718;HRun=0;HaplotypeScore=102.5722;InbreedingCoeff=0.7249;MQ=57.09;MQ0=8;MQRankSum=1.805;QD=9.67;ReadPosRankSum=0.229;VQSLOD=2.6838;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:33:6.36:0,6,718	1/1:2,3:5:9.03:116,9,0	./.	./.	1/1:10,7:17:15.05:194,15,0	1/1:17,9:27:17.89:208,18,0	1/1:13,4:17:18.04:218,18,0	./.	1/1:8,8:17:17.89:215,18,0	1/1:11,5:16:15.05:191,15,0	1/1:7,5:12:15.05:194,15,0	1/1:10,11:21:21.01:271,21,0	0/0:21,0:31:12.04:0,12,161	1/1:14,10:25:21.03:254,21,0	1/1:16,9:25:15.05:194,15,0	1/1:17,8:27:15.01:176,15,0	1/1:16,12:28:30.07:388,30,0	0/0:25,0:25:27.24:0,27,830	0/0:16,0:14:15.04:0,15,235	0/0:10,0:16:6.66:0,7,85	0/0:17,0:18:3.01:0,3,39	1/1:14,0:15:21.02:239,21,0	0/0:17,0:23:14.41:0,14,196	0/0:12,0:27:39.11:0,39,494	0/1:10,0:15:57.75:58,0,103	0/1:17,0:17:23.59:24,0,153	0/0:18,0:23:21.03:0,21,258	0/0:1,0:3:6.02:0,6,78
chr10	70479912	.	CG	C	1087.72	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.321;DP=667;FS=3.335;HRun=3;HaplotypeScore=77.0742;InbreedingCoeff=0.9849;MQ=91.93;MQ0=0;MQRankSum=-2.410;QD=17.54;ReadPosRankSum=0.817;VQSLOD=3.4427;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,1887	0/0:8,0:8:12.04:0,12,173	0/0:28,0:28:72.04:0,72,1063	0/0:30,0:30:87.29:0,87,1219	0/0:26,0:26:63.17:0,63,852	0/0:15,0:15:42.14:0,42,605	0/0:26,0:26:78.22:0,78,1099	0/0:27,0:27:78.25:0,78,1104	0/0:27,0:27:81.26:0,81,1146	0/0:14,0:14:39.12:0,39,545	0/0:17,0:17:39.12:0,39,542	0/0:31,0:31:90.29:0,90,1273	1/1:4,21:25:63.76:511,64,0	0/0:26,0:26:75.25:0,75,1068	0/0:18,0:18:54.18:0,54,776	0/0:18,0:18:54.18:0,54,777	0/0:32,0:32:90.29:0,90,1271	0/0:19,0:19:54.18:0,54,777	0/0:12,0:12:33.11:0,33,475	0/0:21,0:21:51.12:0,51,665	0/0:49,0:49:99:0,144,1991	0/0:29,0:29:57.16:0,57,770	1/1:6,7:13:17:158,17,0	1/1:2,22:24:64.48:560,64,0	0/0:24,0:24:54.13:0,54,690	0/0:25,0:25:63.15:0,63,849	0/0:23,0:23:66.22:0,66,934	0/0:10,0:10:27.09:0,27,388
chr10	70479916	.	CT	C	1394.51	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.889;DP=604;FS=1.130;HRun=1;HaplotypeScore=70.5304;InbreedingCoeff=0.9873;MQ=94.18;MQ0=0;MQRankSum=-3.070;QD=25.35;ReadPosRankSum=0.350;VQSLOD=3.5094;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1911	0/0:4,0:4:12.04:0,12,192	0/0:25,0:25:69.70:0,70,1105	0/0:32,0:32:90.06:0,90,1348	0/0:24,0:24:69.22:0,69,1067	0/0:14,0:14:42.14:0,42,671	0/0:26,0:26:78.27:0,78,1246	0/0:27,0:27:81.28:0,81,1286	0/0:27,0:27:81.28:0,81,1289	0/0:13,0:13:39.13:0,39,623	0/0:15,0:15:39.13:0,39,623	0/0:32,0:32:96.33:0,96,1525	1/1:2,21:23:65.74:620,66,0	0/0:26,0:26:72.22:0,72,1101	0/0:19,0:19:57.19:0,57,904	0/0:19,0:19:57.19:0,57,900	0/0:30,0:30:87.30:0,87,1391	0/0:18,0:18:54.18:0,54,863	0/0:11,0:11:33.11:0,33,508	0/0:15,0:15:45.15:0,45,719	0/0:46,0:46:99:0,135,2099	0/0:22,0:22:63.16:0,63,974	1/1:1,7:8:21.02:210,21,0	1/1:2,22:24:68.50:707,69,0	0/0:12,0:12:36.12:0,36,576	0/0:19,0:19:54.18:0,54,862	0/0:22,0:22:66.23:0,66,1055	0/0:10,0:10:30.10:0,30,475
chr10	70481253	.	TACAC	T	792.08	PASS	AB=0.905;AC=19;AF=0.365;AN=52;BaseQRankSum=1.875;DP=626;FS=2.344;HRun=0;HaplotypeScore=109.4345;InbreedingCoeff=0.2097;MQ=56.43;MQ0=21;MQRankSum=1.415;QD=2.41;ReadPosRankSum=0.533;VQSLOD=2.2443;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:36:15.57:103,16,0	0/0:6,0:6:9.02:0,9,136	./.	./.	0/0:15,0:15:17.97:0,18,276	0/0:21,0:21:12.04:0,12,267	0/1:31,0:31:22.08:22,0,197	0/0:15,0:15:8.93:0,9,64	0/0:17,0:15:16.42:0,16,171	0/0:28,0:27:20.94:0,21,424	1/1:12,0:12:3:25,3,0	0/1:20,0:20:5.79:6,0,188	0/1:12,0:14:1.44:87,0,1	0/1:13,0:13:2.63:3,0,237	0/0:22,0:21:8.96:0,9,189	0/0:19,0:19:2.09:0,2,125	0/1:33,1:33:13.28:13,0,347	0/1:23,0:28:38.74:39,0,50	1/1:11,0:7:3.81:47,4,0	0/1:10,0:16:3.29:19,0,3	0/1:36,1:44:19.61:74,0,20	0/0:35,0:34:19.45:0,19,261	1/1:9,6:15:5.98:93,6,0	1/1:17,15:32:24.08:364,24,0	0/0:21,0:21:23.97:0,24,290	0/0:21,0:21:5.46:0,5,117	0/1:16,1:17:59.56:60,0,106	0/0:9,0:9:12.62:0,13,93
chr10	70482078	.	T	TG	812.71	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.919;DP=592;FS=0.725;HRun=8;HaplotypeScore=58.9050;InbreedingCoeff=0.9951;MQ=80.03;MQ0=0;MQRankSum=-1.661;QD=18.90;ReadPosRankSum=-1.249;VQSLOD=3.0678;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,20:25:42.12:485,42,0	0/0:9,0:9:27.01:0,27,247	0/0:18,0:17:29.91:0,30,268	0/0:19,0:20:37.61:0,38,296	0/0:20,1:22:21.43:0,21,433	0/0:28,0:28:72.03:0,72,657	0/0:14,0:14:30.01:0,30,274	0/0:25,0:25:48.01:0,48,439	0/0:20,0:20:57.02:0,57,517	0/0:20,0:20:51.03:0,51,467	0/0:21,0:21:57.02:0,57,520	0/0:21,0:21:34.41:0,34,398	0/0:16,0:16:45.02:0,45,412	0/0:13,0:13:30.02:0,30,275	0/0:33,0:33:87.04:0,87,796	0/0:18,0:18:42.01:0,42,384	0/0:37,0:37:94.86:0,95,855	1/1:3,15:18:39.12:450,39,0	0/0:26,0:26:66.02:0,66,602	0/0:33,0:33:84.03:0,84,768	0/0:10,0:10:23.99:0,24,214	0/0:27,0:27:75.02:0,75,680	0/0:22,0:22:48.01:0,48,438	0/0:15,0:15:33.01:0,33,302	0/0:30,0:30:77.98:0,78,701	0/0:15,0:15:33.01:0,33,302	0/0:24,0:24:72:0,72,651	0/0:12,0:12:36.02:0,36,329
chr10	70486309	.	G	GC	444.81	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.800;DP=690;FS=0.000;HRun=1;HaplotypeScore=71.7110;InbreedingCoeff=0.9956;MQ=78.95;MQ0=0;MQRankSum=-1.473;QD=34.22;ReadPosRankSum=2.533;VQSLOD=3.6425;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1484	0/0:20,0:20:54.18:0,54,701	0/0:15,0:15:41.39:0,41,491	0/0:20,0:20:60.18:0,60,753	0/0:13,0:13:36.12:0,36,467	0/0:23,0:23:66.21:0,66,856	0/0:21,0:21:54.18:0,54,701	0/0:18,0:18:48.15:0,48,611	0/0:36,0:36:99:0,105,1349	0/0:31,0:31:93.28:0,93,1173	0/0:13,0:13:39.13:0,39,506	0/0:39,0:39:99:0,117,1505	0/0:28,0:28:81.25:0,81,1034	0/0:27,0:27:78.23:0,78,984	0/0:28,0:28:78.24:0,78,998	0/0:33,0:33:96.27:0,96,1204	0/0:23,0:23:63.20:0,63,818	1/1:0,13:13:36.12:540,36,0	0/0:23,0:23:66.20:0,66,844	0/0:24,0:24:72.23:0,72,935	0/0:44,0:44:99:0,126,1619	0/0:30,0:30:84.25:0,84,1062	0/0:20,0:20:42.14:0,42,545	0/0:25,0:25:69.22:0,69,895	0/0:18,0:18:54.17:0,54,688	0/0:26,0:26:72.23:0,72,935	0/0:31,0:31:93.28:0,93,1179	0/0:8,0:8:21.07:0,21,273
chr10	70486386	.	TTG	T	347.87	PASS	AB=0.948;AC=11;AF=0.220;AN=50;BaseQRankSum=3.921;DP=566;FS=5.326;HRun=0;HaplotypeScore=79.7109;InbreedingCoeff=-0.0297;MQ=67.14;MQ0=16;MQRankSum=1.126;QD=1.67;ReadPosRankSum=2.903;VQSLOD=1.1466;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:6:0,6,51	0/0:13,0:13:5.80:0,6,71	./.	./.	0/1:17,0:17:27.28:27,0,81	0/0:19,0:17:4.19:0,4,180	0/0:18,2:20:18.06:0,18,267	0/1:27,0:27:0.71:1,0,104	0/1:22,0:20:71.84:72,0,119	0/1:21,0:21:1.61:2,0,176	0/0:20,0:20:21.07:0,21,295	0/0:24,0:23:26.70:0,27,279	0/1:9,10:19:26.86:27,0,39	0/0:20,0:22:26.64:0,27,285	0/0:25,0:23:10.68:0,11,180	0/0:20,0:20:4.97:0,5,209	0/0:14,0:12:9.01:0,9,103	./.	0/0:17,0:17:6.02:0,6,84	0/1:24,0:25:50.40:50,0,221	0/0:37,0:36:2.49:0,2,258	0/0:15,0:14:9.03:0,9,134	0/1:20,2:20:3.58:107,0,4	1/1:31,1:31:17.99:178,18,0	0/0:12,0:12:9:0,9,111	0/0:21,0:21:31.28:0,31,309	0/1:15,0:15:11.71:12,0,163	0/1:8,0:7:2.70:3,0,76
chr10	70486429	.	T	TGC	77.50	PASS	AB=0.800;AC=2;AF=0.038;AN=52;BaseQRankSum=-0.123;DP=491;FS=0.000;HRun=0;HaplotypeScore=113.6576;InbreedingCoeff=0.0216;MQ=45.34;MQ0=39;MQRankSum=1.084;QD=1.89;ReadPosRankSum=-2.554;VQSLOD=1.7449;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:6,12:16:8.12:112,0,8	0/0:6,0:6:8.91:0,9,98	./.	./.	0/0:15,0:14:17.93:0,18,179	0/0:23,0:19:35.01:0,35,352	0/0:30,0:26:26.68:0,27,333	0/0:9,0:9:20.81:0,21,167	0/0:25,0:23:44.47:0,44,405	0/0:17,0:18:44.45:0,44,382	0/0:18,0:16:6.14:0,6,357	0/0:22,0:20:47.59:0,48,463	0/0:21,0:21:14.43:0,14,123	0/0:23,0:22:38.23:0,38,423	0/0:20,0:17:16.65:0,17,208	0/0:21,0:22:33.46:0,33,357	0/0:18,0:12:20.32:0,20,196	0/0:8,0:5:8.96:0,9,68	0/0:10,0:11:29.72:0,30,245	0/0:19,0:19:32.81:0,33,351	0/0:35,0:33:47.57:0,48,463	0/0:12,0:15:11.84:0,12,164	0/0:19,0:16:4.15:0,4,116	0/0:23,0:21:32.33:0,32,213	0/0:18,0:17:17.91:0,18,181	0/1:23,0:21:53.37:53,0,181	0/0:20,0:20:40.74:0,41,406	0/0:8,0:6:5.21:0,5,103
chr10	70486431	.	TGAGAGAGA	T	360.10	PASS	AB=0.961;AC=9;AF=0.173;AN=52;BaseQRankSum=1.184;DP=483;FS=2.894;HRun=0;HaplotypeScore=142.0939;InbreedingCoeff=0.2044;MQ=45.18;MQ0=37;MQRankSum=0.616;QD=2.52;ReadPosRankSum=-1.640;VQSLOD=2.2788;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:16:3.01:69,3,0	0/0:8,0:8:0.94:0,1,2	./.	./.	0/0:15,0:14:2.99:0,3,24	0/1:22,0:18:4.73:5,0,185	0/0:29,0:25:10:0,10,195	0/0:8,0:8:6.01:0,6,67	0/0:25,0:23:21.96:0,22,352	0/1:15,0:17:27.09:27,0,313	0/0:17,0:15:9.03:0,9,166	0/0:22,0:20:13.52:0,14,385	0/0:22,0:22:21.70:0,22,507	0/1:24,0:23:30.19:30,0,108	0/1:18,1:17:0.03:0,0,0	0/1:20,0:21:99:132,0,100	0/0:18,0:12:16.58:0,17,230	0/0:8,0:5:9.03:0,9,257	0/0:13,0:12:12.01:0,12,271	0/0:19,0:19:6.02:0,6,212	0/0:35,0:33:12.15:0,12,682	0/0:18,0:15:9.03:0,9,152	0/0:15,0:13:6.02:0,6,217	0/0:24,0:22:21.07:0,21,655	0/0:17,0:17:9.01:0,9,156	1/1:15,6:19:5.99:218,6,0	0/0:20,0:19:30.06:0,30,850	0/0:6,0:5:3.01:0,3,113
chr10	70486849	.	G	GT	2338.80	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=6.123;DP=372;FS=0.000;HRun=4;HaplotypeScore=47.9943;InbreedingCoeff=0.7823;MQ=82.07;MQ0=0;MQRankSum=-1.477;QD=23.16;ReadPosRankSum=1.925;VQSLOD=2.4934;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:58.07:730,58,0	0/0:13,0:13:36.03:0,36,372	0/1:12,0:12:27.38:27,0,73	0/0:12,0:11:14.66:0,15,95	0/0:22,0:22:66.09:0,66,699	0/0:12,0:12:36.06:0,36,377	0/0:3,0:3:9.01:0,9,91	0/0:20,0:20:57.11:0,57,598	0/0:6,0:6:18.05:0,18,204	0/0:12,0:12:33.09:0,33,373	0/0:21,0:21:48.05:0,48,493	0/0:8,0:8:24.04:0,24,254	1/1:10,0:10:15.03:146,15,0	0/0:11,0:11:30.07:0,30,330	0/0:9,0:9:10.73:0,11,129	0/0:11,0:11:30.06:0,30,327	0/0:7,0:7:18.03:0,18,194	1/1:3,11:14:39:467,39,0	0/0:19,0:19:38.09:0,38,401	0/0:19,0:19:48.09:0,48,513	0/0:9,0:9:24.05:0,24,261	0/0:13,0:13:32.42:0,32,382	1/1:8,0:8:21.04:209,21,0	0/1:9,0:9:9.37:185,0,9	0/0:16,0:16:45.08:0,45,478	1/1:0,16:16:48.15:640,48,0	0/0:28,0:28:78.20:0,78,870	1/1:1,7:8:9.03:123,9,0
chr10	70486853	.	T	TTAA	1781.36	PASS	AB=0.571;AC=13;AF=0.232;AN=56;BaseQRankSum=6.149;DP=378;FS=1.078;HRun=0;HaplotypeScore=65.2635;InbreedingCoeff=0.8201;MQ=82.25;MQ0=0;MQRankSum=-0.813;QD=18.75;ReadPosRankSum=2.830;VQSLOD=3.4923;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:39.41:163,39,0	0/0:13,0:13:39.07:0,39,583	0/0:10,0:11:9.02:0,9,159	0/0:12,0:11:1.94:0,2,127	0/0:22,0:22:66.12:0,66,1050	0/0:12,0:12:36.07:0,36,553	0/0:5,0:5:11.97:0,12,154	0/0:21,0:21:63.12:0,63,905	0/0:6,0:6:18.06:0,18,321	0/0:11,0:11:33.11:0,33,591	0/0:22,0:22:57.05:0,57,786	0/0:9,0:9:27.06:0,27,397	1/1:0,7:11:15.05:347,15,0	0/0:12,0:12:36.10:0,36,565	0/0:7,0:8:23.32:0,23,291	0/0:12,0:13:36.06:0,36,546	0/0:7,0:7:21.05:0,21,321	1/1:15,0:15:10.83:120,11,0	0/0:14,0:17:50.87:0,51,632	0/0:18,0:18:54.13:0,54,837	0/0:8,0:8:24.08:0,24,424	0/0:12,0:13:38.99:0,39,599	1/1:0,9:9:23.95:527,24,0	0/1:3,9:12:21.17:568,0,21	0/0:15,0:15:45.13:0,45,736	1/1:16,0:16:44.17:204,44,0	0/0:28,0:28:84.28:0,84,1428	1/1:7,0:7:8.23:35,8,0
chr10	70488052	.	A	AAC	2947.59	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-11.482;DP=1097;FS=0.464;HRun=0;HaplotypeScore=135.4131;InbreedingCoeff=0.9994;MQ=67.06;MQ0=0;MQRankSum=-1.386;QD=42.11;ReadPosRankSum=1.460;VQSLOD=4.9725;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,114,1497	0/0:15,0:15:38.32:0,38,490	0/0:39,0:38:87.22:0,87,1076	0/0:38,0:36:82.13:0,82,1025	0/0:44,0:44:99:0,120,1560	0/0:31,0:31:53.23:0,53,909	0/0:31,0:31:78.19:0,78,954	0/0:34,0:34:81.21:0,81,1022	0/0:43,0:43:99:0,107,1444	0/0:51,0:51:99:0,138,1772	0/0:20,0:20:54.17:0,54,690	0/0:36,0:36:99:0,100,1245	0/0:49,0:49:99:0,132,1631	0/0:44,0:44:99:0,111,1431	0/0:59,0:59:99:0,162,2066	0/0:44,0:44:99:0,123,1571	0/0:37,0:37:96.26:0,96,1213	0/0:46,0:46:99:0,117,1450	0/0:16,0:16:36.12:0,36,468	0/0:41,0:41:99:0,117,1493	0/0:52,0:52:99:0,136,1694	0/0:53,0:53:99:0,141,1804	0/0:44,0:44:99:0,117,1490	0/0:46,0:45:99:0,123,1571	0/0:30,0:30:75.22:0,75,947	1/1:5,45:50:27.36:2100,27,0	0/0:36,0:36:99:0,99,1263	1/1:1,19:20:57.20:969,57,0
chr10	70489167	.	G	GC	6010.44	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.695;DP=702;FS=5.219;HRun=3;HaplotypeScore=84.1619;InbreedingCoeff=0.9998;MQ=94.62;MQ0=0;MQRankSum=-1.415;QD=38.53;ReadPosRankSum=0.201;VQSLOD=4.8899;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,1507	0/0:10,0:10:30.09:0,30,360	0/0:31,0:31:72.20:0,72,852	0/0:33,0:33:74.26:0,74,856	0/0:40,0:40:99:0,120,1417	0/0:18,0:18:54.17:0,54,648	0/0:23,0:23:69.20:0,69,816	0/0:22,0:22:60.12:0,60,678	0/0:16,0:16:48.15:0,48,576	0/0:33,0:33:87.27:0,87,1044	0/0:22,0:22:63.19:0,63,754	0/0:20,0:20:60.17:0,60,710	1/1:1,34:35:93.31:1301,93,0	0/0:13,0:13:36.11:0,36,432	0/0:22,0:22:57.17:0,57,684	0/0:14,0:14:42.12:0,42,495	0/0:32,0:32:93.28:0,93,1116	1/1:0,17:17:51.17:714,51,0	0/0:20,0:20:54.13:0,54,617	0/0:25,0:25:72.22:0,72,864	0/0:25,0:25:72.20:0,72,852	0/0:38,0:38:99:0,108,1296	1/1:1,21:22:63.21:876,63,0	1/1:1,36:37:96.32:1344,96,0	0/0:22,0:22:66.19:0,66,781	1/1:2,31:33:63.28:1271,63,0	0/0:22,0:22:66.19:0,66,778	1/1:0,12:12:36.12:504,36,0
chr10	70490136	.	GCGCTCGCTCTCTCT	G	1205.45	PASS	AB=0.767;AC=12;AF=0.214;AN=56;BaseQRankSum=10.734;DP=521;FS=0.510;HRun=0;HaplotypeScore=190.5194;InbreedingCoeff=0.7291;MQ=78.67;MQ0=9;MQRankSum=-3.723;QD=11.06;ReadPosRankSum=1.062;VQSLOD=2.2179;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:26.84:204,27,0	0/0:1,0:1:3.01:0,3,49	0/0:27,0:18:20.16:0,20,369	0/0:40,0:21:42.95:0,43,556	0/0:14,0:14:30.06:0,30,422	0/0:26,0:26:57.19:0,57,947	0/0:19,0:19:47.82:0,48,613	0/0:41,0:41:99:0,105,1460	0/0:14,0:14:41.16:0,41,806	0/0:18,0:17:51.14:0,51,883	0/0:21,0:21:57.09:0,57,694	0/0:13,0:13:39.11:0,39,668	1/1:14,0:14:35.94:296,36,0	0/0:11,0:11:33.08:0,33,415	0/0:14,0:14:39.12:0,39,694	0/0:19,0:19:50.85:0,51,820	0/0:21,0:20:48.15:0,48,988	0/1:2,14:16:15.57:123,0,16	0/0:19,0:19:43.60:0,44,903	0/0:23,0:23:65.87:0,66,856	0/0:17,0:16:42.07:0,42,584	0/0:12,0:12:34.36:0,34,573	1/1:15,0:16:38.78:309,39,0	1/1:20,0:20:36.34:285,36,0	0/0:18,0:18:54.16:0,54,764	0/1:20,0:20:10.48:70,0,10	0/0:24,0:24:63.18:0,63,1483	1/1:4,0:4:3.01:92,3,0
chr10	70490138	.	GCTCGCTCTCTCTCTCTCTCTCTCT	G	1427.77	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=9.298;DP=518;FS=1.712;HRun=0;HaplotypeScore=278.9712;InbreedingCoeff=0.6568;MQ=74.32;MQ0=12;MQRankSum=-2.699;QD=15.35;ReadPosRankSum=0.076;VQSLOD=2.3698;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:26.84:204,27,0	0/0:1,0:1:2.99:0,3,24	0/0:23,0:14:13.13:0,13,160	0/0:39,0:20:34.27:0,34,266	0/0:15,0:14:26.84:0,27,204	0/0:25,0:25:56.63:0,57,709	0/0:20,0:20:38.67:0,39,644	0/0:40,0:40:97.41:0,97,904	0/0:15,0:15:40.25:0,40,787	0/0:19,0:18:41.76:0,42,876	0/0:19,0:19:47.24:0,47,341	0/0:14,0:14:36.95:0,37,757	1/1:14,0:14:35.94:296,36,0	0/0:11,0:11:28.78:0,29,269	0/0:15,0:15:35.94:0,36,846	0/0:18,0:18:48.23:0,48,960	0/0:21,0:20:47.85:0,48,1367	0/0:17,0:17:8.12:0,8,65	0/0:20,0:20:48.79:0,49,1056	0/0:23,0:22:57.83:0,58,403	0/0:16,0:15:35.88:0,36,471	0/0:13,0:13:35.75:0,36,608	0/1:16,0:16:80.90:255,0,81	0/1:21,0:19:99:196,0,286	0/0:18,0:18:50.52:0,51,571	1/1:19,0:19:22.78:441,23,0	0/0:23,0:23:63.20:0,63,2399	1/1:0,4:4:3.01:196,3,0
chr10	70490142	.	GCTCT	G	63.34	PASS	AB=0.952;AC=10;AF=0.294;AN=34;BaseQRankSum=2.544;DP=538;FS=16.833;HRun=0;HaplotypeScore=99.4199;InbreedingCoeff=0.0971;MQ=64.69;MQ0=21;MQRankSum=0.347;QD=0.48;ReadPosRankSum=2.775;VQSLOD=0.7371;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:2,0:2:2.99:0,3,24	./.	./.	./.	0/0:31,0:31:9:0,9,119	0/1:21,0:20:0:0,0,0	0/0:44,0:40:0.94:0,1,2	0/0:19,0:19:3.48:0,3,42	0/0:19,0:17:6.30:0,6,25	./.	0/0:13,0:13:0:0,0,0	./.	0/0:10,0:10:3:0,3,25	0/0:15,0:15:3:0,3,25	0/1:21,0:21:35.99:36,0,38	0/1:19,6:24:18.40:38,0,18	1/1:17,0:17:2.86:27,3,0	./.	./.	./.	0/0:19,0:18:3:0,3,25	1/1:18,0:18:2.80:13,3,0	./.	0/0:20,0:20:2.98:0,3,21	./.	0/1:25,0:25:17.07:22,0,17	1/1:4,0:4:3:28,3,0
chr10	70490261	.	G	GA	3540.75	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-8.503;DP=597;FS=1.934;HRun=5;HaplotypeScore=58.0935;InbreedingCoeff=0.9964;MQ=75.12;MQ0=0;MQRankSum=0.874;QD=35.77;ReadPosRankSum=2.749;VQSLOD=3.5398;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:72.23:947,72,0	0/0:9,0:9:24.05:0,24,250	0/0:15,0:15:34.88:0,35,348	0/0:8,0:8:17.07:0,17,162	0/0:32,0:32:87.22:0,87,935	0/0:20,0:20:57.14:0,57,612	0/0:16,0:16:45.10:0,45,476	0/0:27,0:27:69.16:0,69,735	0/0:26,0:26:69.17:0,69,742	0/0:28,0:28:81.20:0,81,866	0/0:26,0:26:75.15:0,75,789	0/0:13,0:13:36.08:0,36,379	1/1:0,21:22:66.21:864,66,0	0/0:19,0:19:51.13:0,51,548	0/0:11,0:11:30.08:0,30,322	0/0:20,0:20:57.14:0,57,612	0/0:24,0:24:72.18:0,72,774	0/0:18,0:18:45.11:0,45,484	0/0:30,0:30:78.19:0,78,839	0/0:34,0:34:90.21:0,90,959	0/0:13,0:13:39.10:0,39,419	0/0:17,0:17:48.12:0,48,516	1/1:3,26:29:81.26:1059,81,0	1/1:1,19:20:51.17:671,51,0	0/0:18,0:18:54.13:0,54,573	0/0:33,0:33:87.22:0,87,935	0/0:24,0:24:66.16:0,66,709	0/0:17,0:16:45.11:0,45,484
chr10	70491067	.	GGGAGCAGGA	G	1727.77	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.336;DP=694;FS=3.569;HRun=0;HaplotypeScore=203.0293;InbreedingCoeff=0.9789;MQ=70.96;MQ0=2;MQRankSum=-1.479;QD=57.59;ReadPosRankSum=-0.654;VQSLOD=3.2619;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,104,4282	0/0:6,0:6:17.98:0,18,619	0/0:15,0:15:35.27:0,35,992	0/0:31,0:29:68.70:0,69,2074	0/0:15,0:15:45.13:0,45,1729	0/0:27,0:27:71.47:0,71,2979	0/0:22,0:22:51.13:0,51,1953	0/0:25,0:25:69.20:0,69,2336	0/0:37,0:37:99:0,102,3822	0/0:27,0:27:75.23:0,75,2926	0/0:18,0:18:48.12:0,48,1846	0/0:28,0:28:80.95:0,81,2844	0/0:31,0:31:72.14:0,72,2662	0/0:26,0:26:75.20:0,75,3127	0/0:37,0:37:93.26:0,93,3706	0/0:28,0:28:78.17:0,78,2803	0/0:33,0:33:93.17:0,93,3322	0/0:20,0:20:57.20:0,57,2372	0/0:12,0:11:30.10:0,30,922	0/0:22,0:22:63.20:0,63,2542	0/0:38,0:38:99:0,105,4076	0/0:29,0:29:87.23:0,87,3361	0/0:18,0:18:42.02:0,42,1232	0/0:34,0:34:87.26:0,87,3727	0/0:20,0:20:57.10:0,57,2105	1/1:1,23:24:69.19:1701,69,0	0/0:24,0:24:69.17:0,69,2365	1/1:6,0:6:11.92:143,12,0
chr10	70491136	.	GGAA	G	4629.40	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.818;DP=702;FS=0.403;HRun=0;HaplotypeScore=115.0881;InbreedingCoeff=0.9508;MQ=88.25;MQ0=0;MQRankSum=-5.517;QD=37.64;ReadPosRankSum=2.261;VQSLOD=5.5084;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:37:93.25:1515,93,0	0/0:7,0:7:21.07:0,21,476	0/0:34,0:34:91.59:0,92,1919	0/0:35,0:34:81.07:0,81,1639	0/0:31,0:31:84.27:0,84,1860	0/0:23,0:23:69.24:0,69,1564	0/0:29,0:29:87.30:0,87,1924	0/0:22,0:22:59.50:0,60,1310	0/0:36,0:36:99:0,108,2337	0/0:37,0:37:99:0,99,2184	0/0:8,0:8:21.07:0,21,476	0/0:29,0:29:84.29:0,84,1882	1/1:0,28:28:69.01:1122,69,0	0/0:21,0:21:60.19:0,60,1313	0/0:29,0:29:78.27:0,78,1732	0/0:25,0:25:72.25:0,72,1611	0/0:30,0:30:87.22:0,87,1872	0/0:23,0:23:63.22:0,63,1427	0/0:12,0:12:30.10:0,30,679	0/0:26,0:26:78.24:0,78,1642	0/0:22,0:22:66.23:0,66,1469	0/0:24,0:24:72.25:0,72,1631	1/1:2,20:22:48.16:796,48,0	1/1:3,33:35:72.25:1196,72,0	0/0:18,0:18:54.13:0,54,1174	0/0:36,0:36:99:0,102,2215	0/0:21,0:21:63.22:0,63,1426	0/0:1,0:1:3.01:0,3,68
chr10	70491947	.	ATGTATGTATGTATGTG	A	307.50	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=5.064;DP=853;FS=0.898;HRun=0;HaplotypeScore=373.4666;InbreedingCoeff=0.2929;MQ=62.59;MQ0=1;MQRankSum=2.355;QD=2.93;ReadPosRankSum=1.061;VQSLOD=1.4617;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,20:25:7.94:252,8,0	0/0:16,0:16:27:0,27,1440	0/0:30,0:27:41.30:0,41,455	0/0:25,0:20:31.79:0,32,320	0/0:41,0:41:65.41:0,65,4108	0/0:25,0:25:63.10:0,63,3300	0/0:23,0:23:57.08:0,57,2271	0/0:39,0:39:81.07:0,81,1062	0/0:26,0:26:60.01:0,60,3382	0/0:54,0:54:99:0,132,4801	0/0:38,0:38:60.09:0,60,2721	0/0:27,0:27:60.15:0,60,3702	0/1:29,0:29:99:105,0,2535	0/0:36,0:36:75.08:0,75,4206	0/0:32,0:32:66.10:0,66,3308	0/0:22,0:22:35.75:0,36,1644	0/0:27,0:27:72.10:0,72,2961	0/0:29,0:29:65.76:0,66,2759	0/0:23,0:22:48.09:0,48,1722	0/0:46,0:46:66.14:0,66,3729	0/0:33,0:33:90.17:0,90,4657	0/0:27,0:27:30.06:0,30,1901	0/1:29,0:29:40.93:41,0,1052	0/1:22,0:22:26.82:27,0,1916	0/0:38,0:38:63.04:0,63,2971	0/0:38,0:38:93.15:0,93,4146	0/0:29,0:29:53.75:0,54,1966	0/0:24,0:24:59.79:0,60,2323
chr10	70492077	.	GGGT	G	7491.87	PASS	AB=0.869;AC=23;AF=0.411;AN=56;BaseQRankSum=19.625;DP=1349;FS=177.746;HRun=0;HaplotypeScore=771.9102;InbreedingCoeff=-0.7206;MQ=44.56;MQ0=2;MQRankSum=-12.664;QD=6.40;ReadPosRankSum=5.523;VQSLOD=-0.5533;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:44,2:46:99:154,0,1821	0/1:34,6:40:99:192,0,1225	0/0:31,0:24:59.74:0,60,1262	0/0:38,1:34:86.48:0,86,1686	0/1:36,15:51:99:179,0,821	0/1:36,2:38:28.12:28,0,1277	0/1:38,5:43:99:145,0,1485	0/1:51,5:53:99:174,0,2076	0/1:52,4:56:99:191,0,1953	0/1:66,19:85:99:890,0,2444	0/1:26,15:41:99:491,0,827	0/1:54,11:65:99:568,0,1824	0/1:52,0:52:99:199,0,1695	0/1:59,9:68:99:414,0,2480	0/1:51,12:63:99:645,0,2033	0/1:34,8:42:99:376,0,1112	0/0:31,1:32:21.24:0,21,1470	0/1:27,1:27:50.25:50,0,1153	0/1:32,1:32:33.27:33,0,1390	0/1:52,16:68:99:535,0,1388	0/0:48,0:48:0.92:0,1,1058	0/1:49,18:67:99:492,0,1691	0/1:42,2:44:69.18:69,0,1330	0/0:27,0:27:51.10:0,51,1033	0/1:42,13:55:99:505,0,1455	0/1:56,9:65:99:394,0,2169	0/1:38,17:54:99:661,0,1435	0/1:7,3:10:99:105,0,396
chr10	70492092	.	G	GATAA	12804.47	PASS	AB=0.805;AC=22;AF=0.393;AN=56;BaseQRankSum=17.957;DP=1282;FS=177.023;HRun=0;HaplotypeScore=803.1463;InbreedingCoeff=-0.6536;MQ=40.44;MQ0=1;MQRankSum=-8.938;QD=11.75;ReadPosRankSum=2.950;VQSLOD=0.3962;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:22.77:23,0,1170	0/1:26,5:35:99:354,0,932	0/0:33,0:24:51.22:0,51,878	0/0:31,0:26:65.18:0,65,987	0/1:36,10:51:99:207,0,630	0/1:30,1:36:99:201,0,836	0/1:28,4:35:99:274,0,527	0/1:62,6:67:99:499,0,1785	0/1:45,4:53:99:675,0,1368	0/1:63,18:90:99:1363,0,1780	0/1:26,15:44:99:539,0,714	0/1:49,11:63:99:1239,0,1267	0/1:35,4:45:99:398,0,1102	0/1:55,6:63:99:818,0,1721	0/1:45,14:62:99:1278,0,1300	0/1:25,8:38:99:941,0,567	0/0:26,0:28:8.65:0,9,943	0/1:20,1:23:99:144,0,705	0/0:33,0:30:70.26:0,70,1019	0/1:39,12:64:99:604,0,1098	0/0:42,0:43:21.69:0,22,792	0/1:40,15:65:99:888,0,1260	0/1:37,2:45:18.53:19,0,1188	0/0:20,0:22:15.69:0,16,602	0/1:30,12:50:99:649,0,876	0/1:38,8:57:99:496,0,1530	0/1:30,15:51:99:1027,0,1087	0/1:8,2:11:99:169,0,263
chr10	70492280	.	TGG	T	5521.23	PASS	AB=0.857;AC=25;AF=0.446;AN=56;BaseQRankSum=23.902;DP=1202;FS=125.269;HRun=4;HaplotypeScore=622.1290;InbreedingCoeff=-0.7945;MQ=48.52;MQ0=1;MQRankSum=-16.326;QD=5.02;ReadPosRankSum=-3.734;VQSLOD=0.4144;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:46,5:51:38.15:38,0,1527	0/1:19,4:26:99:174,0,773	0/0:44,2:37:76.25:0,76,1416	0/0:24,2:20:10.06:0,10,820	0/1:32,3:39:99:137,0,776	0/1:35,6:44:99:310,0,1278	0/0:29,0:29:62.59:0,63,1144	0/1:40,4:44:99:172,0,1644	0/1:53,6:60:99:201,0,2116	0/1:44,16:67:99:734,0,1687	0/1:23,10:35:99:169,0,751	0/1:51,7:62:99:236,0,2314	0/1:36,4:40:99:263,0,945	0/1:50,5:58:99:141,0,2129	0/1:58,5:64:99:155,0,2486	0/1:44,3:47:20.56:21,0,2138	0/1:26,4:30:99:104,0,829	0/1:22,2:24:3.96:4,0,999	0/1:24,5:27:99:146,0,1044	0/1:33,12:50:99:511,0,1055	0/1:61,2:62:99:102,0,2327	0/1:44,8:54:99:398,0,1033	0/1:21,4:25:99:167,0,485	0/1:25,2:27:90.29:137,0,90	0/1:24,6:35:99:208,0,830	0/1:37,15:54:99:790,0,1092	0/1:39,4:44:99:107,0,1627	0/1:16,3:20:96.80:97,0,413
chr10	70492337	.	TG	T	4017.60	PASS	AB=0.954;AC=22;AF=0.393;AN=56;BaseQRankSum=20.521;DP=1246;FS=174.767;HRun=2;HaplotypeScore=666.5360;InbreedingCoeff=-0.6527;MQ=41.76;MQ0=18;MQRankSum=-15.187;QD=3.90;ReadPosRankSum=0.403;VQSLOD=-0.6571;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:46,22:67:99:684,0,668	0/1:32,0:31:46.74:47,0,578	0/0:39,0:15:26.60:0,27,506	0/0:41,0:15:41.93:0,42,535	0/1:43,1:44:99:201,0,412	0/1:48,1:49:99:187,0,897	0/0:38,1:39:9.69:0,10,918	0/0:37,0:36:99:0,105,1519	0/1:55,0:56:99:244,0,1377	0/1:70,1:72:99:267,0,1382	0/1:42,0:42:59.34:59,0,664	0/1:61,0:61:87.52:88,0,1654	0/1:51,7:58:99:371,0,564	0/1:51,2:53:99:134,0,1335	0/1:52,2:54:99:153,0,1425	0/1:42,3:45:47.82:48,0,1481	0/1:29,1:30:96.82:97,0,762	0/1:21,0:21:14.31:14,0,541	0/0:18,1:18:12.50:0,13,650	0/1:53,1:53:99:212,0,939	0/0:41,0:40:99:0,114,1695	0/1:55,2:57:99:103,0,760	0/1:30,6:36:99:189,0,107	0/1:27,7:34:99:216,0,137	0/1:34,0:34:99:175,0,491	0/1:69,1:70:99:408,0,608	0/1:40,0:40:85.41:85,0,991	0/1:19,1:20:36.17:36,0,117
chr10	70492353	.	TG	T	4634.31	PASS	AB=0.912;AC=23;AF=0.411;AN=56;BaseQRankSum=21.482;DP=1214;FS=223.168;HRun=2;HaplotypeScore=586.8502;InbreedingCoeff=-0.6875;MQ=42.93;MQ0=23;MQRankSum=-16.057;QD=4.50;ReadPosRankSum=-6.128;VQSLOD=0.1747;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:43,25:66:99:664,0,943	0/1:25,1:25:99:123,0,478	0/0:43,1:20:52.38:0,52,668	0/0:37,0:12:33.11:0,33,462	0/1:44,1:45:99:311,0,340	0/1:39,4:43:99:170,0,1001	0/1:37,8:45:99:130,0,1191	0/0:41,0:40:99:0,114,1630	0/1:50,3:53:72.33:72,0,1332	0/1:73,5:78:99:425,0,1567	0/1:35,1:36:99:149,0,588	0/1:58,3:61:25.32:25,0,1674	0/1:48,11:59:99:358,0,668	0/1:43,5:48:44.76:45,0,1219	0/1:52,2:54:42.37:42,0,1413	0/1:36,2:38:21.49:21,0,1226	0/1:23,5:28:99:133,0,740	0/1:18,1:19:6.41:6,0,536	0/0:21,0:19:19.48:0,19,691	0/1:41,2:42:99:326,0,751	0/0:42,0:40:99:0,114,1671	0/1:58,3:61:99:247,0,779	0/1:33,3:36:99:246,0,148	0/1:23,6:29:37.50:37,0,225	0/1:27,7:34:99:379,0,454	0/1:55,9:64:99:554,0,578	0/1:37,4:41:99:103,0,957	0/1:20,0:19:65.74:66,0,87
chr10	70493240	.	GAC	G	1240.38	PASS	AB=0.989;AC=12;AF=0.214;AN=56;BaseQRankSum=4.883;DP=792;FS=5.430;HRun=0;HaplotypeScore=140.0713;InbreedingCoeff=0.5151;MQ=57.39;MQ0=17;MQRankSum=1.180;QD=5.49;ReadPosRankSum=1.959;VQSLOD=2.8568;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,3:34:28.72:327,29,0	0/0:6,0:6:12.04:0,12,192	0/0:39,1:13:8.89:0,9,83	0/0:48,0:19:15.80:0,16,103	0/0:25,0:25:6.13:0,6,419	0/0:23,1:24:2.85:0,3,746	0/0:29,0:29:68.80:0,69,1026	0/0:46,0:46:86.23:0,86,1138	0/1:29,0:29:23.57:24,0,670	0/0:20,0:18:29.41:0,29,394	0/0:18,0:18:42.14:0,42,647	0/1:21,1:21:7.27:7,0,569	1/1:23,0:23:16.15:422,16,0	0/0:26,0:26:27.01:0,27,690	0/0:36,1:37:47.14:0,47,1113	0/1:37,0:37:9.52:10,0,916	0/0:27,0:27:53.59:0,54,678	0/0:25,0:24:19.33:0,19,309	0/0:24,0:23:32.78:0,33,417	0/0:32,0:31:66.21:0,66,994	0/0:64,0:62:99:0,129,1861	0/0:21,0:21:47.82:0,48,651	1/1:16,3:19:13.24:151,13,0	1/1:31,5:36:41.33:454,41,0	0/0:22,0:22:51.17:0,51,812	0/0:30,0:29:21.85:0,22,870	0/1:24,0:23:14.46:14,0,554	0/0:2,0:2:5.98:0,6,67
chr10	70493257	.	AAACACACACACAC	A	1176.97	PASS	AB=0.901;AC=7;AF=0.125;AN=56;BaseQRankSum=8.658;DP=765;FS=0.604;HRun=0;HaplotypeScore=280.8165;InbreedingCoeff=0.4596;MQ=53.37;MQ0=16;MQRankSum=-6.339;QD=8.59;ReadPosRankSum=-2.757;VQSLOD=1.5371;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,6:32:16.49:384,16,0	0/0:6,0:6:15.05:0,15,695	0/0:27,0:4:6.01:0,6,77	0/0:31,0:8:14.96:0,15,106	0/0:19,0:19:50.17:0,50,1628	0/0:25,0:24:69.24:0,69,3189	0/0:26,0:26:75.24:0,75,2623	0/0:47,0:47:99:0,122,2675	0/0:27,0:27:74.26:0,74,2633	0/0:21,0:19:56.84:0,57,1734	0/0:19,0:19:44.82:0,45,1825	0/0:31,0:30:81.26:0,81,3024	1/1:17,7:24:9.12:628,9,0	0/0:27,0:27:75.08:0,75,2617	0/0:40,0:40:99:0,109,3751	0/0:36,0:36:90:0,90,3738	0/0:33,0:33:90.75:0,91,3348	0/1:25,0:24:59.49:59,0,245	0/0:19,0:17:49.55:0,50,828	0/0:24,0:23:60.20:0,60,2038	0/0:63,0:60:99:0,153,6152	0/0:22,0:22:62.41:0,62,2681	0/1:18,3:21:13.11:117,0,13	0/1:27,7:34:84.05:124,0,84	0/0:25,0:25:66.22:0,66,2531	0/0:34,0:33:96.30:0,96,3622	0/0:21,0:21:59.23:0,59,2345	0/0:4,0:4:12.02:0,12,141
chr10	70493258	.	A	AACAC	998.67	PASS	AB=0.989;AC=16;AF=0.296;AN=54;BaseQRankSum=6.033;DP=764;FS=7.165;HRun=0;HaplotypeScore=176.3765;InbreedingCoeff=0.5815;MQ=53.40;MQ0=16;MQRankSum=-3.634;QD=3.93;ReadPosRankSum=-4.307;VQSLOD=0.7586;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:33:23.43:149,23,0	0/0:6,0:6:8.45:0,8,112	./.	0/1:31,0:8:0:0,0,0	0/0:14,0:19:11.04:0,11,229	0/0:25,0:24:35.47:0,35,508	0/0:27,0:27:33.02:0,33,477	0/0:46,0:46:1.70:0,2,155	0/0:26,0:27:37.16:0,37,459	0/1:21,0:19:11.74:12,0,292	0/0:18,0:18:14.41:0,14,277	0/0:31,0:30:49.42:0,49,552	1/1:24,0:24:16.51:285,17,0	0/0:27,0:27:11.89:0,12,404	0/0:39,0:40:61.82:0,62,836	0/0:29,0:36:54.03:0,54,734	0/0:31,0:33:59.79:0,60,793	0/1:11,0:23:5.09:5,0,36	0/0:19,0:17:12.60:0,13,172	0/0:22,0:21:20.99:0,21,300	0/0:63,0:60:67.05:0,67,928	0/0:23,0:23:37:0,37,534	1/1:21,0:21:5.10:40,5,0	1/1:34,0:34:11.71:77,12,0	0/0:24,0:24:38.79:0,39,508	1/1:23,13:38:2.26:558,2,0	0/1:21,0:21:4.43:4,0,339	1/1:4,0:4:3.01:30,3,0
chr10	70493427	.	A	AGTGT	1456.31	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.016;DP=620;FS=0.824;HRun=0;HaplotypeScore=112.7226;InbreedingCoeff=0.9512;MQ=60.82;MQ0=2;MQRankSum=-5.241;QD=26.97;ReadPosRankSum=-2.639;VQSLOD=3.1632;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:54.17:0,54,859	0/0:6,0:6:18.04:0,18,254	0/0:19,0:14:26.98:0,27,376	0/0:11,0:6:6.49:0,6,100	0/0:25,0:25:66.21:0,66,1089	0/0:26,0:26:60.20:0,60,1009	0/0:18,0:18:42.14:0,42,703	0/0:32,0:32:68.81:0,69,1098	0/0:21,0:21:39.13:0,39,646	0/0:26,0:26:63.21:0,63,1042	0/0:25,0:25:63.21:0,63,1064	0/0:23,0:23:51.17:0,51,859	1/1:6,7:13:24.97:577,25,0	0/0:21,0:21:45.14:0,45,725	0/0:22,0:22:51.16:0,51,835	0/0:20,0:21:48.10:0,48,773	0/0:27,0:26:66.21:0,66,1081	0/0:5,0:18:31.85:0,32,268	0/0:17,0:17:39.13:0,39,638	0/0:25,0:26:66.69:0,67,1088	0/0:32,0:33:78.24:0,78,1268	0/0:20,0:20:51.16:0,51,835	1/1:5,10:17:30.10:721,30,0	1/1:10,12:24:12.04:298,12,0	0/0:20,0:22:44.45:0,44,849	0/0:38,0:38:99:0,99,1646	0/0:32,0:32:75.26:0,75,1266	0/0:9,0:9:27.09:0,27,456
chr10	70493575	.	C	CT	1309.77	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-4.201;DP=514;FS=2.884;HRun=8;HaplotypeScore=47.4243;InbreedingCoeff=0.9181;MQ=65.78;MQ0=1;MQRankSum=0.127;QD=27.29;ReadPosRankSum=0.873;VQSLOD=4.2394;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:42.02:0,42,384	0/0:12,0:12:30.01:0,30,275	0/0:7,0:7:14.95:0,15,125	0/0:1,0:1:3:0,3,27	0/0:32,0:32:77.99:0,78,704	0/0:26,0:25:74.97:0,75,672	0/0:10,0:10:27.01:0,27,247	0/0:34,0:34:87.03:0,87,794	0/0:16,0:16:36:0,36,329	0/0:17,0:17:39:0,39,357	0/0:14,0:14:36.01:0,36,329	0/0:15,0:15:42.02:0,42,384	1/1:2,6:8:18.05:208,18,0	0/0:18,0:18:51.01:0,51,462	0/0:18,0:18:45.01:0,45,407	0/0:6,0:6:12:0,12,110	0/0:30,0:30:83.99:0,84,756	0/0:18,0:18:45.02:0,45,412	0/0:18,0:18:35.88:0,36,312	0/0:26,0:26:69.02:0,69,627	0/0:7,0:7:18:0,18,165	0/0:21,0:21:60.02:0,60,545	1/1:3,21:24:63.19:724,63,0	1/1:0,16:15:45.13:519,45,0	0/0:28,0:28:66.02:0,66,604	0/0:33,0:33:93.04:0,93,853	0/0:29,0:29:81.02:0,81,735	0/0:10,0:10:21.01:0,21,192
chr10	70493658	.	G	GTTTT	3490.72	PASS	AB=0.702;AC=16;AF=0.286;AN=56;BaseQRankSum=8.319;DP=468;FS=1.618;HRun=12;HaplotypeScore=88.2699;InbreedingCoeff=0.8418;MQ=78.25;MQ0=4;MQRankSum=-3.564;QD=24.93;ReadPosRankSum=0.071;VQSLOD=2.4518;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:72.25:1194,72,0	0/0:5,0:6:11.92:0,12,140	0/0:17,0:17:17.56:0,18,197	0/0:13,0:12:8.71:0,9,103	0/1:6,0:24:3.19:59,0,3	0/0:27,0:26:53.86:0,54,708	0/1:8,0:10:0.37:0,0,181	0/0:19,0:22:30.95:0,31,369	0/0:16,0:17:42:0,42,536	0/0:16,0:18:12.35:0,12,230	0/0:13,0:14:25.09:0,25,319	0/0:12,0:12:25.24:0,25,319	1/1:10,0:9:24.05:377,24,0	0/0:18,0:18:29.82:0,30,394	0/0:14,0:15:39.04:0,39,496	0/0:9,0:10:19.24:0,19,224	0/0:25,0:24:44.73:0,45,591	1/1:2,1:13:30.01:382,30,0	0/0:12,0:13:14.15:0,14,287	0/0:21,0:21:11.21:0,11,421	0/0:15,0:15:24.48:0,24,307	0/0:13,0:16:35.98:0,36,457	1/1:12,0:12:21.07:367,21,0	1/1:18,0:16:42.14:677,42,0	0/0:17,0:21:33.86:0,34,404	1/1:18,0:18:18.06:324,18,0	0/0:23,0:24:49.11:0,49,572	1/1:2,1:6:6.02:111,6,0
chr10	70493661	.	T	TTTTA	4221.26	PASS	AB=0.839;AC=12;AF=0.214;AN=56;BaseQRankSum=-1.891;DP=471;FS=3.678;HRun=0;HaplotypeScore=87.1700;InbreedingCoeff=0.7598;MQ=75.11;MQ0=7;MQRankSum=-3.445;QD=38.73;ReadPosRankSum=4.907;VQSLOD=4.9484;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:30:72.24:1727,72,0	0/0:7,0:7:18.04:0,18,257	0/0:18,0:16:39.05:0,39,493	0/0:11,0:10:14.53:0,15,192	0/0:23,0:23:48.39:0,48,333	0/0:25,0:24:66.12:0,66,1089	0/0:11,0:10:20.99:0,21,318	0/0:25,0:24:60.43:0,60,769	0/0:18,0:18:48.14:0,48,808	0/0:18,0:18:50.75:0,51,621	0/0:14,0:14:41.96:0,42,577	0/0:13,0:12:36.05:0,36,542	1/1:2,6:8:24.08:541,24,0	0/0:17,0:17:42.04:0,42,645	0/0:15,0:15:42.10:0,42,721	0/0:10,0:10:24.03:0,24,374	0/0:26,0:25:66.08:0,66,993	0/1:13,0:13:16.59:121,0,17	0/0:14,0:14:38.97:0,39,551	0/0:21,0:21:50.57:0,51,770	0/0:16,0:16:45.02:0,45,624	0/0:17,0:16:42.60:0,43,701	1/1:5,7:12:26.64:535,27,0	1/1:3,16:18:41.94:1006,42,0	0/0:21,0:21:54.06:0,54,751	0/1:10,0:19:99:215,0,182	0/0:22,0:21:63.10:0,63,968	1/1:5,0:6:6:76,6,0
chr10	70494157	.	TG	T	1917.38	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.725;DP=620;FS=5.303;HRun=6;HaplotypeScore=75.2603;InbreedingCoeff=0.9834;MQ=85.97;MQ0=0;MQRankSum=-2.379;QD=26.63;ReadPosRankSum=2.106;VQSLOD=4.1736;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,1361	0/0:4,0:4:12.04:0,12,158	0/0:24,0:24:45.40:0,45,611	0/0:26,0:26:62.92:0,63,741	0/0:14,0:14:42.12:0,42,535	0/0:27,0:27:81.26:0,81,1066	0/0:26,0:26:69.20:0,69,878	0/0:22,0:22:54.17:0,54,698	0/0:23,0:23:69.16:0,69,873	0/0:21,0:21:60.20:0,60,788	0/0:13,0:13:33.08:0,33,405	0/0:29,0:29:75.20:0,75,952	1/1:1,22:23:57.14:613,57,0	0/0:29,0:29:78.24:0,78,1011	0/0:26,0:26:75.24:0,75,985	0/0:13,0:13:39.09:0,39,482	0/0:31,0:31:90.29:0,90,1183	0/0:19,0:19:45.15:0,45,592	0/0:15,0:15:36.12:0,36,474	0/0:21,0:21:63.19:0,63,803	0/0:35,0:35:96.30:0,96,1247	0/0:20,0:20:60.20:0,60,790	1/1:1,15:16:45.11:480,45,0	1/1:1,32:33:90.23:967,90,0	0/0:22,0:22:60.19:0,60,787	0/0:21,0:21:63.17:0,63,799	0/0:23,0:23:66.21:0,66,867	0/0:5,0:5:15.04:0,15,183
chr10	70495763	.	A	AGACATGAACAAAT	14253.24	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-2.872;DP=693;FS=3.785;HRun=0;HaplotypeScore=240.3015;InbreedingCoeff=0.9994;MQ=84.91;MQ0=0;MQRankSum=-14.560;QD=141.12;ReadPosRankSum=-1.270;VQSLOD=4.2965;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,25:47:99:6594,117,0	0/0:15,0:15:45.13:0,45,1696	0/0:38,0:38:99:0,105,3680	0/0:24,0:24:60.20:0,60,2093	0/0:36,0:36:99:0,105,4158	0/0:21,0:21:60.19:0,60,2162	0/0:24,0:24:69.20:0,69,2396	0/0:29,0:29:81.28:0,81,2910	0/0:23,0:23:69.24:0,69,2747	0/0:32,0:32:90.31:0,90,3536	0/0:22,0:22:60.20:0,60,2225	0/0:19,0:19:57.18:0,57,2096	1/1:7,10:18:51.18:2957,51,0	0/0:25,0:25:75.23:0,75,2628	0/0:26,0:26:75.24:0,75,2710	0/0:26,0:26:78.25:0,78,3021	0/0:34,0:34:99:0,99,3587	0/0:14,0:14:42.14:0,42,1680	0/0:20,0:20:57.20:0,57,2243	0/0:31,0:31:90.31:0,90,3456	0/0:17,0:17:51.16:0,51,1986	0/0:26,0:26:75.09:0,75,2979	1/1:13,10:24:63.22:3306,63,0	1/1:8,3:11:27.09:1397,27,0	0/0:15,0:15:45.15:0,45,1779	0/0:32,0:32:96.32:0,96,3553	0/0:34,0:34:99:0,102,4000	0/0:9,0:9:27.09:0,27,1105
chr10	70497003	.	GAATAA	G	1225.37	PASS	AB=0.564;AC=3;AF=0.054;AN=56;BaseQRankSum=7.417;DP=566;FS=0.000;HRun=0;HaplotypeScore=106.8135;InbreedingCoeff=0.4075;MQ=60.40;MQ0=14;MQRankSum=-4.261;QD=37.13;ReadPosRankSum=0.838;VQSLOD=3.2888;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,3018	0/0:9,0:9:24.08:0,24,730	0/0:11,0:5:9.13:0,9,191	0/0:13,0:4:5.13:0,5,53	0/0:18,0:18:54.18:0,54,1547	0/0:22,0:22:60.21:0,60,1757	0/0:16,0:16:45.14:0,45,1258	0/0:45,0:42:99:0,105,2980	0/0:21,0:21:57.18:0,57,1562	0/0:23,0:23:60.21:0,60,1832	0/0:28,0:28:75.26:0,75,2230	0/0:9,0:7:18.06:0,18,547	0/0:16,0:16:45.14:0,45,1256	0/0:16,0:16:42.14:0,42,1222	0/0:16,0:16:39.13:0,39,1079	0/0:11,0:11:33.10:0,33,891	0/0:36,0:36:99:0,102,2796	0/0:20,0:20:54.14:0,54,1493	0/0:20,0:19:48.16:0,48,1269	0/0:30,0:30:87.30:0,87,2514	0/0:15,0:14:36.12:0,36,1023	0/0:10,0:10:27.07:0,27,643	0/0:14,0:14:33.11:0,33,957	0/0:15,0:15:39.13:0,39,1023	0/0:33,0:33:90.31:0,90,2644	0/1:7,23:29:46.64:1255,0,47	0/0:29,0:29:81.28:0,81,2241	1/1:0,2:2:3.01:62,3,0
chr10	70497405	.	T	TG	1699.33	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.934;DP=604;FS=1.743;HRun=7;HaplotypeScore=79.6165;InbreedingCoeff=0.9780;MQ=83.56;MQ0=0;MQRankSum=-0.945;QD=27.86;ReadPosRankSum=-0.039;VQSLOD=4.1201;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:63.18:0,63,402	0/0:8,0:8:24.04:0,24,232	0/0:30,0:30:74.87:0,75,665	0/0:23,0:22:39.23:0,39,364	0/0:16,0:16:42.07:0,42,406	0/0:18,0:18:51.07:0,51,486	0/0:20,0:20:54.05:0,54,510	0/0:33,0:33:75.12:0,75,724	0/0:28,0:28:75.10:0,75,718	0/0:23,0:23:57.07:0,57,547	0/0:21,0:21:57.07:0,57,544	0/0:18,0:18:48.05:0,48,457	1/1:2,19:21:53.87:651,54,0	0/0:17,0:17:42.05:0,42,401	0/0:17,0:17:42.05:0,42,400	0/0:24,0:24:69.11:0,69,666	0/0:13,0:13:27.04:0,27,261	0/0:10,0:10:27.04:0,27,261	0/0:21,0:21:60.07:0,60,568	0/0:29,0:29:84.12:0,84,806	0/0:24,0:24:57.08:0,57,550	0/0:19,0:19:51.04:0,51,484	1/1:3,14:17:39.12:471,39,0	1/1:1,22:23:60.18:720,60,0	0/0:24,0:24:69.11:0,69,666	0/0:32,0:32:93.15:0,93,898	0/0:30,0:30:87.12:0,87,833	0/0:3,0:3:9.01:0,9,87
chr10	70497712	.	TAC	T	565.15	PASS	AB=0.886;AC=12;AF=0.222;AN=54;BaseQRankSum=6.012;DP=604;FS=3.236;HRun=0;HaplotypeScore=87.0883;InbreedingCoeff=-0.0258;MQ=57.72;MQ0=3;MQRankSum=-1.172;QD=2.28;ReadPosRankSum=2.030;VQSLOD=1.3694;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:12.92:0,13,296	0/0:10,0:10:6:0,6,69	./.	0/0:19,0:11:0:0,0,0	0/0:15,0:15:6:0,6,69	0/0:15,0:17:6.89:0,7,216	0/1:24,3:27:66.66:67,0,268	0/0:23,0:23:5.99:0,6,66	0/0:24,1:25:9.03:0,9,470	0/0:15,0:19:30.05:0,30,347	0/1:15,2:17:48.06:48,0,140	0/0:19,0:30:35.77:0,36,362	0/0:16,0:16:18.06:0,18,270	0/0:23,0:24:27.53:0,28,355	0/0:22,0:22:30.06:0,30,390	0/1:19,2:21:36.04:36,0,288	0/0:22,1:23:15:0,15,533	0/1:23,0:24:8.73:33,0,9	0/1:18,1:17:15:15,0,206	0/0:12,0:15:6:0,6,52	0/1:28,3:30:36.07:36,0,248	0/0:15,0:24:15.45:0,15,150	0/0:14,0:14:18.04:0,18,249	0/1:32,2:34:1.37:1,0,412	0/1:19,3:22:63.08:63,0,326	1/1:7,10:18:29.12:283,29,0	0/1:24,3:27:30.03:30,0,407	0/1:3,3:7:4.03:98,0,4
chr10	70498112	.	A	AG	2979.57	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-6.783;DP=413;FS=4.720;HRun=3;HaplotypeScore=41.2354;InbreedingCoeff=0.9311;MQ=64.62;MQ0=1;MQRankSum=-1.340;QD=35.05;ReadPosRankSum=1.833;VQSLOD=3.9495;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:37:93.32:1393,93,0	0/0:7,0:7:21.07:0,21,272	0/0:10,0:9:25.19:0,25,283	0/0:9,0:8:21.06:0,21,249	0/0:13,0:13:36.12:0,36,466	0/0:17,0:17:45.14:0,45,578	0/0:20,0:20:60.13:0,60,758	0/0:15,0:15:39.13:0,39,503	0/0:12,0:12:36.12:0,36,467	0/0:16,0:16:48.15:0,48,613	0/0:4,0:4:12.04:0,12,156	0/0:14,0:14:42.12:0,42,528	1/1:1,13:14:39.13:584,39,0	0/0:19,0:19:51.17:0,51,660	0/0:15,0:15:45.12:0,45,567	0/0:9,0:9:24.08:0,24,310	0/0:29,0:29:84.27:0,84,1085	0/0:11,0:11:33.07:0,33,410	0/0:19,0:18:51.16:0,51,649	0/0:13,0:13:39.13:0,39,503	0/0:18,0:18:51.17:0,51,662	0/0:12,0:12:36.12:0,36,466	1/1:0,12:12:24.08:360,24,0	1/1:5,17:22:2.57:793,3,0	0/0:10,0:10:30.10:0,30,389	0/0:13,0:13:36.10:0,36,451	0/0:17,0:17:42.14:0,42,545	0/0:6,0:6:18.06:0,18,234
chr10	70499521	.	GA	G	3887.97	PASS	AB=0.529;AC=11;AF=0.196;AN=56;BaseQRankSum=11.754;DP=663;FS=9.686;HRun=6;HaplotypeScore=65.9688;InbreedingCoeff=0.9364;MQ=86.34;MQ0=0;MQRankSum=-2.379;QD=28.17;ReadPosRankSum=4.062;VQSLOD=3.9780;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,41:44:99:1290,120,0	0/0:9,0:9:24.08:0,24,316	0/0:23,0:23:57.18:0,57,734	0/0:23,0:23:56.87:0,57,648	0/0:28,0:28:81.26:0,81,1065	0/0:16,0:16:42.14:0,42,552	0/0:26,0:26:78.25:0,78,1026	0/0:43,0:43:99:0,129,1684	0/0:20,0:20:57.19:0,57,750	0/0:28,0:28:69.22:0,69,903	0/0:13,0:13:36.12:0,36,474	0/0:20,0:20:54.18:0,54,710	1/1:3,14:17:39.10:419,39,0	0/0:20,0:20:60.19:0,60,785	0/0:26,0:26:75.23:0,75,972	0/0:28,0:28:75.24:0,75,987	0/0:34,0:33:99:0,99,1289	0/0:20,0:20:51.17:0,51,669	0/0:27,0:27:78.21:0,78,1006	0/0:26,0:26:69.22:0,69,908	0/0:39,0:39:99:0,114,1484	0/0:18,0:18:48.16:0,48,631	1/1:1,15:16:42.10:451,42,0	1/1:0,28:28:81.20:871,81,0	0/0:12,0:12:36.10:0,36,457	0/1:3,24:27:0.76:696,0,1	0/0:26,0:25:78.24:0,78,1011	1/1:1,5:6:15.04:161,15,0
chr10	70500355	.	G	GCC	1102	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=1.121;DP=333;FS=5.155;HRun=7;HaplotypeScore=59.3299;InbreedingCoeff=0.7827;MQ=92.50;MQ0=0;MQRankSum=-4.343;QD=16.70;ReadPosRankSum=-2.227;VQSLOD=0.3667;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,7:15:23.82:275,24,0	0/0:7,0:7:21.06:0,21,242	0/0:16,0:16:39.11:0,39,454	0/0:14,0:14:27.04:0,27,291	0/0:8,0:8:12.02:0,12,139	0/0:10,0:10:15.01:0,15,175	0/0:20,0:20:45.10:0,45,514	0/0:10,0:10:15.03:0,15,174	0/0:15,0:15:36.08:0,36,419	0/0:7,0:7:18.05:0,18,209	0/1:8,0:8:7.55:8,0,155	0/0:13,0:13:27.05:0,27,315	0/0:5,0:6:2.02:0,2,5	0/0:14,0:14:33.08:0,33,384	0/0:11,0:11:27.07:0,27,314	0/0:14,0:14:30.09:0,30,350	0/0:21,0:21:51.13:0,51,594	1/1:1,15:16:42.14:689,42,0	0/0:11,0:11:24.05:0,24,270	0/0:5,0:5:14.53:0,15,149	0/0:33,0:33:81.23:0,81,944	0/0:8,0:8:18.03:0,18,200	1/1:5,0:5:3.47:27,3,0	1/1:15,0:16:6.01:68,6,0	0/0:7,0:7:18.04:0,18,208	1/1:0,1:4:11.79:108,12,0	0/0:17,0:17:42.11:0,42,485	1/1:1,1:2:6.02:97,6,0
chr10	70501095	.	TG	T	522.07	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.178;DP=530;FS=0.000;HRun=2;HaplotypeScore=80.4540;InbreedingCoeff=0.9937;MQ=82.48;MQ0=0;MQRankSum=0.326;QD=24.86;ReadPosRankSum=2.547;VQSLOD=3.4654;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,134,778	0/0:9,0:9:27.08:0,27,381	0/0:21,0:18:41.19:0,41,511	0/0:27,0:27:49.52:0,50,466	0/0:20,0:20:60.09:0,60,757	0/0:17,0:17:51.15:0,51,724	0/0:17,0:17:46.78:0,47,676	0/0:19,0:19:47.96:0,48,549	0/0:16,0:16:34.88:0,35,470	0/0:11,0:11:33.02:0,33,331	0/0:10,0:10:27.06:0,27,341	0/0:16,0:16:45.60:0,46,631	0/0:18,0:18:41.06:0,41,263	0/0:13,0:13:39.02:0,39,514	0/0:21,0:21:42.74:0,43,626	0/0:20,0:20:60.08:0,60,771	0/0:24,0:24:72.18:0,72,1007	1/1:1,20:21:48.16:617,48,0	0/0:16,0:16:48.04:0,48,508	0/0:14,0:14:31.88:0,32,405	0/0:21,0:21:59.95:0,60,798	0/0:14,0:14:33.33:0,33,501	0/0:12,0:12:22.85:0,23,134	0/0:19,0:19:52.51:0,53,331	0/0:13,0:13:34.02:0,34,436	0/0:31,0:31:88.43:0,88,572	0/0:24,0:24:64.85:0,65,825	0/0:12,0:12:34.98:0,35,215
chr10	70501097	.	GCCC	G	4791.84	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.817;DP=527;FS=1.763;HRun=10;HaplotypeScore=86.0091;InbreedingCoeff=0.9958;MQ=83.32;MQ0=0;MQRankSum=-1.008;QD=32.38;ReadPosRankSum=5.117;VQSLOD=4.2221;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,48:55:99:1637,123,0	0/0:9,0:9:27.09:0,27,525	0/0:20,0:18:30.09:0,30,539	0/0:28,0:28:47.17:0,47,737	0/0:20,0:20:54.16:0,54,1028	0/0:18,0:18:51.16:0,51,1019	0/0:16,0:17:51.15:0,51,996	0/0:19,0:19:36.05:0,36,624	0/0:15,0:16:39.07:0,39,677	0/0:12,0:12:18.05:0,18,328	0/0:10,0:10:24.07:0,24,458	0/0:14,0:15:45.13:0,45,880	1/1:0,18:18:48.16:655,48,0	0/0:14,0:14:39.13:0,39,786	0/0:16,0:19:51.09:0,51,889	0/0:18,0:18:48.13:0,48,955	0/0:24,0:24:69.21:0,69,1391	0/0:20,0:20:48.15:0,48,584	0/0:16,0:16:27.08:0,27,510	0/0:11,0:13:33.06:0,33,551	0/0:19,0:19:57.20:0,57,1161	0/0:12,0:14:39.09:0,39,722	1/1:0,12:12:30.10:409,30,0	1/1:2,17:19:48.15:655,48,0	0/0:12,0:14:39.07:0,39,677	1/1:5,27:32:18.99:985,19,0	0/0:21,0:23:63.22:0,63,1246	1/1:1,11:12:33.11:450,33,0
chr10	70501790	.	C	CT	4245.72	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=14.480;DP=717;FS=1.279;HRun=0;HaplotypeScore=83.1481;InbreedingCoeff=0.9998;MQ=90.20;MQ0=0;MQRankSum=-0.838;QD=37.57;ReadPosRankSum=2.145;VQSLOD=5.0828;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:93.31:1321,93,0	0/0:12,0:12:36.11:0,36,486	0/0:27,0:27:78.21:0,78,1015	0/0:28,0:28:64.40:0,64,912	0/0:19,0:19:57.19:0,57,796	0/0:23,0:23:69.23:0,69,964	0/0:22,0:22:66.14:0,66,865	0/0:37,0:37:99:0,105,1398	0/0:25,0:25:69.23:0,69,964	0/0:32,0:32:96.32:0,96,1338	0/0:20,0:20:60.19:0,60,821	0/0:22,0:22:63.21:0,63,881	1/1:2,27:29:78.73:1102,79,0	0/0:25,0:25:75.22:0,75,1025	0/0:30,0:30:90.30:0,90,1257	0/0:25,0:25:75.24:0,75,1030	0/0:40,0:40:99:0,115,1608	0/0:23,0:23:66.22:0,66,923	0/0:28,0:28:81.27:0,81,1130	0/0:33,0:33:93.31:0,93,1299	0/0:21,0:21:60.20:0,60,838	0/0:14,0:14:42.14:0,42,587	1/1:2,21:23:60.20:841,60,0	1/1:1,25:26:70.79:981,71,0	0/0:19,0:19:57.19:0,57,797	0/0:33,0:33:99:0,99,1381	0/0:35,0:35:99:0,99,1375	0/0:11,0:11:30.10:0,30,419
chr10	70503326	.	C	CAT	1595.42	PASS	AB=0.933;AC=5;AF=0.089;AN=56;BaseQRankSum=-4.627;DP=472;FS=8.325;HRun=0;HaplotypeScore=79.0215;InbreedingCoeff=0.7407;MQ=67.59;MQ0=4;MQRankSum=-2.503;QD=29.01;ReadPosRankSum=0.979;VQSLOD=4.6359;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:47.81:0,48,611	0/0:11,0:11:27.07:0,27,338	0/1:13,0:8:0.13:0,0,16	0/0:26,0:9:3.66:0,4,33	0/0:20,0:20:51.16:0,51,661	0/0:30,0:29:57.16:0,57,748	0/0:14,0:14:39.06:0,39,443	0/0:34,0:34:93.28:0,93,1180	0/0:7,0:7:21.06:0,21,266	0/0:11,0:11:27.08:0,27,343	0/0:23,0:23:51.14:0,51,644	0/0:15,0:15:39.13:0,39,511	0/0:10,0:10:21.03:0,21,244	0/0:12,0:12:33.09:0,33,417	0/0:3,0:3:9.03:0,9,117	0/0:6,0:6:18.05:0,18,222	0/0:36,0:36:90.27:0,90,1152	0/0:9,0:9:18.04:0,18,216	0/0:18,0:18:42.13:0,42,536	0/0:12,0:12:24.02:0,24,299	0/0:14,0:14:30.10:0,30,393	0/0:5,0:5:12.04:0,12,158	0/0:3,0:3:6:0,6,63	0/0:8,0:8:21.05:0,21,258	0/0:25,0:25:72.20:0,72,922	1/1:4,17:21:51.16:842,51,0	0/0:34,0:34:93.30:0,93,1211	1/1:1,19:20:51.17:874,51,0
chr10	70510856	.	C	CA	4355.82	PASS	AB=0.567;AC=13;AF=0.232;AN=56;BaseQRankSum=-5.907;DP=618;FS=3.791;HRun=8;HaplotypeScore=61.7768;InbreedingCoeff=0.8860;MQ=78.96;MQ0=0;MQRankSum=-1.840;QD=26.89;ReadPosRankSum=1.475;VQSLOD=5.7107;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,41:49:34.95:1163,35,0	0/0:6,0:6:12:0,12,109	0/0:17,0:18:25.80:0,26,220	0/0:14,0:14:24.01:0,24,218	0/0:14,0:14:27:0,27,247	0/0:16,0:16:45.02:0,45,412	0/0:25,0:25:60:0,60,543	0/0:30,0:30:81.02:0,81,738	0/0:31,0:31:81.04:0,81,740	0/0:18,0:18:42.01:0,42,384	0/0:11,0:11:27.01:0,27,247	0/0:26,0:26:72.04:0,72,658	1/1:2,17:19:48.14:548,48,0	0/0:25,0:25:69.04:0,69,631	0/0:31,0:31:84.04:0,84,769	0/0:29,0:29:81.03:0,81,737	0/0:28,1:29:43.35:0,43,633	1/1:0,24:24:63.19:727,63,0	0/0:16,0:17:41.05:0,41,363	0/0:5,0:5:12:0,12,110	0/0:37,0:37:78.02:0,78,714	0/0:24,0:24:60.02:0,60,549	1/1:2,8:10:21.06:242,21,0	1/1:3,33:36:93.28:1073,93,0	0/0:25,0:25:69.03:0,69,629	0/1:4,13:17:37.29:360,0,37	0/0:25,0:25:51:0,51,462	1/1:0,7:7:21.06:242,21,0
chr10	70511184	.	GCGCGCACA	G	1264.94	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=8.989;DP=452;FS=2.360;HRun=0;HaplotypeScore=120.5428;InbreedingCoeff=0.6561;MQ=59.30;MQ0=2;MQRankSum=-4.646;QD=12.78;ReadPosRankSum=3.398;VQSLOD=2.2632;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:6.42:0,6,45	0/0:6,0:6:12.04:0,12,358	0/0:3,0:2:0.89:0,1,2	0/0:5,0:4:7.99:0,8,42	0/0:14,0:14:42.06:0,42,1196	0/0:25,0:25:57.14:0,57,1366	0/0:28,0:28:81.23:0,81,1854	0/0:21,0:21:53.73:0,54,746	0/0:19,0:19:33.44:0,33,706	0/0:15,0:14:39.09:0,39,949	0/0:4,0:4:6.02:0,6,133	0/0:24,0:24:63.16:0,63,1808	1/1:15,0:15:8.12:422,8,0	0/0:18,0:18:51.16:0,51,1483	0/0:12,0:12:24.03:0,24,634	0/0:13,0:13:36.09:0,36,960	0/0:27,0:27:71.89:0,72,1962	1/1:29,0:29:15.05:207,15,0	0/0:12,0:10:29.98:0,30,661	0/0:5,0:5:15.04:0,15,356	0/0:45,0:43:99:0,102,2699	0/0:13,0:13:33.09:0,33,987	1/1:3,0:3:2.96:19,3,0	0/1:29,0:29:28.94:116,0,29	0/0:12,0:12:33.02:0,33,649	1/1:18,0:18:0.73:488,1,0	0/0:13,0:13:36:0,36,858	1/1:1,4:5:6.02:160,6,0
chr10	70511188	.	GCACACGCACACACACACACACACA	G	3673.88	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=7.079;DP=453;FS=0.850;HRun=0;HaplotypeScore=222.1829;InbreedingCoeff=0.6840;MQ=57.98;MQ0=5;MQRankSum=-6.268;QD=39.93;ReadPosRankSum=4.091;VQSLOD=2.5564;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:0.44:0,0,1	0/0:6,0:6:15.05:0,15,1262	0/0:4,0:1:3.01:0,3,37	0/0:7,0:4:7.15:0,7,52	0/0:14,0:14:39.11:0,39,3251	0/0:24,0:24:51.06:0,51,3229	0/0:27,0:27:78.11:0,78,4648	0/0:21,0:21:51.03:0,51,2403	0/0:20,0:20:27.23:0,27,1850	0/0:14,0:13:33.08:0,33,2127	0/0:4,0:4:6.02:0,6,357	0/0:24,0:24:60.21:0,60,5513	1/1:0,15:15:30.10:1945,30,0	0/0:18,0:18:51.09:0,51,3759	0/0:11,0:11:24.05:0,24,1765	0/0:12,0:12:30.09:0,30,2334	0/0:27,0:27:65.87:0,66,5096	1/1:0,29:29:15.05:973,15,0	0/0:14,0:12:33.09:0,33,1943	0/0:5,0:5:12.04:0,12,804	0/0:43,0:41:99:0,102,6962	0/0:13,0:13:27.08:0,27,2461	1/1:1,3:3:3.01:167,3,0	1/1:2,27:29:9.03:581,9,0	0/0:11,0:11:17.99:0,18,1013	0/1:15,0:15:7.21:7,0,1280	0/0:12,0:12:30.01:0,30,1498	0/0:6,0:5:6.02:0,6,328
chr10	70511190	.	ACACG	A	870.64	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=9.211;DP=457;FS=1.392;HRun=0;HaplotypeScore=89.6189;InbreedingCoeff=0.8099;MQ=57.84;MQ0=4;MQRankSum=-4.755;QD=7.26;ReadPosRankSum=2.200;VQSLOD=2.2734;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:0.03:0,0,0	0/0:7,0:7:14.83:0,15,157	0/0:7,0:2:3.11:0,3,9	0/0:8,0:4:5.80:0,6,29	0/0:13,0:13:11.22:0,11,616	0/0:25,0:25:53.60:0,54,731	0/0:26,0:26:40.86:0,41,929	0/0:19,0:19:50.26:0,50,527	0/0:20,0:20:23.20:0,23,389	0/0:14,0:13:16.07:0,16,492	0/0:4,0:4:6.01:0,6,85	0/0:24,0:24:59.74:0,60,1078	1/1:15,0:15:30.08:324,30,0	0/0:18,0:18:50.99:0,51,894	0/0:11,0:11:22.56:0,23,277	0/0:13,0:13:32.86:0,33,564	0/0:27,0:27:65.40:0,65,938	1/1:29,0:29:15.04:163,15,0	0/0:14,0:12:25.88:0,26,347	0/0:5,0:5:12.01:0,12,201	0/0:45,0:44:99:0,103,1493	0/0:13,0:13:27.06:0,27,578	1/1:4,0:3:2.97:20,3,0	1/1:28,0:28:9.02:95,9,0	0/0:12,0:12:21:0,21,373	1/1:1,14:15:40:361,40,0	0/0:12,0:12:30.01:0,30,470	1/1:5,1:5:6.01:75,6,0
chr10	70511194	.	GCA	G	555.57	PASS	AB=0.925;AC=22;AF=0.407;AN=54;BaseQRankSum=5.971;DP=454;FS=0.689;HRun=0;HaplotypeScore=74.2088;InbreedingCoeff=-0.0448;MQ=57.25;MQ0=4;MQRankSum=-3.123;QD=1.60;ReadPosRankSum=2.242;VQSLOD=1.3412;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:0:0,0,0	0/1:3,2:6:52.26:52,0,73	0/0:8,0:3:2.50:0,2,9	./.	0/1:12,0:13:20.76:21,0,254	0/1:21,3:24:37.21:37,0,297	0/1:26,1:28:53.48:53,0,354	0/0:19,0:19:20.95:0,21,225	0/1:19,0:19:5.68:6,0,168	0/1:13,0:13:26.76:27,0,182	0/0:4,0:4:3.01:0,3,44	0/0:23,0:23:10.59:0,11,532	1/1:15,0:15:28.41:139,28,0	0/1:17,2:19:3.55:4,0,374	0/0:5,0:11:12.01:0,12,124	0/1:11,0:11:12.60:13,0,232	0/1:18,9:27:95.35:95,0,318	1/1:29,0:29:14.20:70,14,0	0/1:12,2:12:48.99:49,0,126	0/0:4,0:4:6.02:0,6,89	0/1:48,1:48:81.67:82,0,549	0/0:11,0:11:21.02:0,21,292	0/1:4,0:3:0:0,0,0	1/1:28,0:28:8.48:41,8,0	0/0:9,0:9:18.03:0,18,228	0/1:15,0:15:12.18:12,0,36	0/0:10,0:10:12.04:0,12,182	1/1:7,0:6:2.72:13,3,0
chr10	70511887	.	TTTCCCTCTC	T	1416.35	PASS	AB=0.816;AC=10;AF=0.179;AN=56;BaseQRankSum=2.434;DP=478;FS=6.329;HRun=0;HaplotypeScore=125.9553;InbreedingCoeff=0.6749;MQ=70.76;MQ0=18;MQRankSum=-5.327;QD=18.16;ReadPosRankSum=-2.191;VQSLOD=1.6482;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.30:0,93,2347	0/0:4,0:4:12.04:0,12,294	0/0:24,0:11:29.03:0,29,589	0/0:36,0:19:47.58:0,48,642	0/0:8,0:8:24.05:0,24,449	0/0:16,0:16:45.15:0,45,1088	0/0:21,0:21:57.31:0,57,1278	0/0:25,0:25:69.17:0,69,1457	0/0:15,0:15:45.14:0,45,1069	0/0:20,0:20:57.16:0,57,1223	0/0:8,0:8:24.05:0,24,501	0/0:19,0:18:51.57:0,52,1045	1/1:7,0:6:9.01:157,9,0	0/0:13,0:13:39.08:0,39,810	0/0:24,0:24:63.64:0,64,1413	0/0:12,0:11:33.09:0,33,684	0/0:22,0:22:60.15:0,60,1351	1/1:15,0:12:29.90:527,30,0	0/0:21,0:17:48.13:0,48,1000	0/0:6,0:6:18.06:0,18,418	0/0:35,0:33:91.14:0,91,1711	0/0:17,0:17:50.83:0,51,1108	0/1:5,7:11:18.98:19,0,25	1/1:21,0:19:20.79:273,21,0	0/0:10,0:10:29.46:0,29,695	1/1:12,0:10:1.97:288,2,0	0/0:11,0:11:33.08:0,33,708	0/1:11,0:9:43.55:309,0,44
chr10	70511893	.	TCTC	T	684.39	PASS	AB=0.611;AC=9;AF=0.161;AN=56;BaseQRankSum=5.920;DP=454;FS=1.898;HRun=0;HaplotypeScore=73.4049;InbreedingCoeff=0.7417;MQ=61.87;MQ0=32;MQRankSum=-6.056;QD=11.04;ReadPosRankSum=-1.959;VQSLOD=2.8664;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:91.25:0,91,1550	0/0:4,0:4:12.04:0,12,202	0/0:21,0:8:20.58:0,21,325	0/0:31,0:14:27.13:0,27,336	0/0:6,0:6:15.04:0,15,235	0/0:17,0:16:42.14:0,42,720	0/0:18,0:18:47.19:0,47,798	0/0:24,0:23:57.20:0,57,991	0/0:15,0:15:45.07:0,45,724	0/0:16,0:14:42.14:0,42,738	0/0:6,0:6:18.06:0,18,299	0/0:21,0:20:19.67:0,20,691	1/1:1,6:6:6.02:98,6,0	0/0:15,0:15:30.04:0,30,499	0/0:21,0:21:51.65:0,52,897	0/0:12,0:10:24.08:0,24,422	0/0:24,0:23:57.17:0,57,960	1/1:6,8:10:20.89:319,21,0	0/0:21,0:15:36.12:0,36,628	0/0:6,0:6:18.05:0,18,267	0/0:32,0:30:58.60:0,59,990	0/0:18,0:17:41.81:0,42,695	0/0:9,0:8:3.01:0,3,35	1/1:6,15:18:11.95:138,12,0	0/0:10,0:10:27.09:0,27,467	1/1:6,2:7:6.02:98,6,0	0/0:9,0:8:24.08:0,24,421	0/1:4,7:9:48.41:181,0,48
chr10	70511923	.	CCCT	C	213.40	PASS	AB=0.842;AC=8;AF=0.148;AN=54;BaseQRankSum=3.929;DP=327;FS=9.063;HRun=0;HaplotypeScore=46.7017;InbreedingCoeff=-0.1495;MQ=38.52;MQ0=76;MQRankSum=-3.344;QD=2.40;ReadPosRankSum=2.932;VQSLOD=0.1152;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:32:54.38:0,54,835	0/1:2,2:3:42.95:47,0,43	./.	0/0:12,1:1:3:0,3,25	0/1:2,3:5:81.84:91,0,82	0/1:11,2:11:80.20:80,0,211	0/0:11,0:7:20.90:0,21,298	0/0:19,0:13:16.47:0,16,247	0/0:11,0:10:30:0,30,389	0/0:10,0:4:12.04:0,12,177	0/0:2,0:1:3.01:0,3,49	0/1:11,3:13:29.82:30,0,214	0/0:3,0:2:2.98:0,3,22	0/0:10,0:10:15.52:0,16,225	0/1:18,1:14:25.76:26,0,280	0/0:15,0:11:25.94:0,26,317	0/0:23,0:20:28.49:0,28,408	0/0:5,0:3:9.03:0,9,130	0/1:19,2:11:27.68:28,0,228	0/0:2,0:2:1.82:0,2,5	0/0:26,1:16:28.50:0,28,417	0/0:7,1:5:7.24:0,7,75	0/1:5,0:5:0.18:0,0,73	0/0:9,0:6:3.01:0,3,45	0/0:10,0:8:12.04:0,12,190	0/0:12,0:5:9.92:0,10,136	0/0:7,0:5:11.07:0,11,153	0/1:7,1:3:5.85:36,0,6
chr10	70511929	.	CCCT	C	162.48	PASS	AB=0.929;AC=12;AF=0.222;AN=54;BaseQRankSum=2.710;DP=335;FS=9.566;HRun=0;HaplotypeScore=46.4015;InbreedingCoeff=-0.1610;MQ=40.15;MQ0=71;MQRankSum=-2.904;QD=0.98;ReadPosRankSum=1.846;VQSLOD=0.1067;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:50.01:0,50,676	0/0:4,0:3:8.94:0,9,99	./.	0/0:11,0:3:9.03:0,9,135	0/1:6,0:6:13.12:13,0,187	0/0:14,0:12:30.03:0,30,399	0/0:14,0:10:30.05:0,30,413	0/1:20,0:14:29.68:30,0,263	0/0:9,0:7:18.05:0,18,258	0/0:9,1:6:17.96:0,18,219	0/0:3,0:2:6.02:0,6,93	0/1:13,1:13:28.57:29,0,247	0/0:6,0:5:5.93:0,6,53	0/0:7,0:7:12.45:0,12,142	0/1:17,2:14:26.33:26,0,214	0/1:14,2:12:23.48:23,0,291	0/1:20,1:18:21.14:21,0,289	0/0:8,0:7:21.07:0,21,289	0/1:24,0:10:20.44:20,0,235	1/1:1,1:2:3.01:53,3,0	0/1:31,0:22:4.07:4,0,442	0/1:4,1:3:42.96:45,0,43	0/0:8,0:8:11.96:0,12,154	0/0:11,0:8:9.03:0,9,133	0/0:10,0:7:11.52:0,12,137	0/0:13,0:6:10.59:0,11,139	0/1:5,2:5:40.58:41,0,117	0/0:9,0:4:9:0,9,112
chr10	70512373	.	CTTGT	C	1534.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.549;DP=797;FS=1.385;HRun=0;HaplotypeScore=126.8111;InbreedingCoeff=0.9935;MQ=84.65;MQ0=0;MQRankSum=-1.413;QD=35.70;ReadPosRankSum=0.117;VQSLOD=3.9338;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,37:43:93.32:1630,93,0	0/0:13,0:13:36.12:0,36,919	0/0:33,0:33:19.16:0,19,1463	0/0:24,0:24:40.17:0,40,986	0/0:31,0:31:78.27:0,78,1992	0/0:20,0:20:51.17:0,51,1270	0/0:25,0:25:60.19:0,60,1472	0/0:34,0:34:90.31:0,90,2217	0/0:26,0:26:75.26:0,75,1894	0/0:40,0:40:99:0,105,2680	0/0:15,0:15:39.13:0,39,975	0/0:22,0:22:60.21:0,60,1532	0/0:31,0:31:84.26:0,84,2036	0/0:23,0:23:54.19:0,54,1354	0/0:29,0:29:75.26:0,75,1896	0/0:33,0:33:93.32:0,93,2375	0/0:32,0:32:84.24:0,84,2005	0/0:18,0:18:39.13:0,39,996	0/0:24,0:24:60.21:0,60,1515	0/0:37,0:37:99:0,99,2528	0/0:24,0:24:63.20:0,63,1557	0/0:26,0:26:66.20:0,66,1549	0/0:27,0:27:72.25:0,72,1809	0/0:36,0:36:99:0,102,2586	0/0:39,0:39:99:0,99,2479	0/0:39,0:39:99:0,111,2777	0/0:32,0:31:90.31:0,90,2289	0/0:21,0:21:51.15:0,51,1249
chr10	70515681	.	C	CG	7590.80	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-13.919;DP=737;FS=6.514;HRun=3;HaplotypeScore=72.2114;InbreedingCoeff=0.9999;MQ=85.54;MQ0=0;MQRankSum=-3.264;QD=36.49;ReadPosRankSum=2.847;VQSLOD=5.4701;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,55:56:99:2057,147,0	0/0:12,0:12:30.09:0,30,360	0/0:24,0:24:59.64:0,60,669	0/0:25,0:25:60.18:0,60,715	0/0:31,0:31:90.27:0,90,1074	0/0:31,0:31:90.26:0,90,1068	0/0:25,0:25:69.21:0,69,827	0/0:23,0:23:69.20:0,69,819	0/0:20,0:20:60.17:0,60,706	0/0:27,0:27:78.24:0,78,934	0/0:20,0:20:57.17:0,57,679	0/0:29,0:29:87.25:0,87,1032	1/1:1,23:24:69.23:959,69,0	0/0:19,0:19:57.17:0,57,684	0/0:35,0:35:99:0,99,1186	0/0:21,0:21:60.18:0,60,720	0/0:41,0:41:99:0,117,1403	1/1:1,24:25:69.23:959,69,0	0/0:18,0:18:48.15:0,48,575	0/0:32,0:32:90.28:0,90,1078	0/0:28,0:28:75.21:0,75,886	0/0:20,0:20:54.16:0,54,637	1/1:1,23:24:60.20:837,60,0	1/1:4,31:35:54.32:1182,54,0	0/0:25,0:25:66.20:0,66,792	1/1:4,23:27:33.25:884,33,0	0/0:23,0:23:66.20:0,66,791	1/1:1,16:17:51.17:713,51,0
chr10	70515929	.	CTG	C	392.35	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=0.496;DP=569;FS=8.722;HRun=0;HaplotypeScore=75.7079;InbreedingCoeff=0.3655;MQ=47.29;MQ0=42;MQRankSum=2.004;QD=2.76;ReadPosRankSum=1.306;VQSLOD=0.5388;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:38:32.90:0,33,260	0/0:5,0:5:9.42:0,9,69	0/0:10,0:3:8.95:0,9,76	0/0:13,0:10:20.68:0,21,174	0/0:18,0:17:5.29:0,5,183	0/0:17,0:15:32.63:0,33,273	0/1:34,0:30:99:100,0,296	0/1:22,0:21:5.43:5,0,229	0/0:24,0:22:53.70:0,54,412	1/1:15,15:28:47.28:357,47,0	1/1:11,0:11:5.99:49,6,0	0/0:17,0:17:3.25:0,3,166	0/0:25,0:21:45.97:0,46,345	0/0:24,0:23:38.83:0,39,303	0/0:25,0:21:23.38:0,23,308	0/1:13,0:12:3.24:3,0,138	0/0:22,0:20:30.28:0,30,226	0/0:18,0:14:36.98:0,37,267	0/0:16,0:11:20.89:0,21,185	0/0:13,0:12:20.97:0,21,172	0/1:32,0:28:5.55:6,0,281	0/0:21,0:19:22.58:0,23,177	0/0:18,0:17:20.96:0,21,170	0/0:34,0:31:20.46:0,20,167	0/0:17,0:16:18.01:0,18,189	0/0:25,0:21:24.44:0,24,353	0/0:16,0:16:32.77:0,33,267	0/0:9,0:9:14.89:0,15,112
chr10	70516052	.	CCTCTCT	C	559.70	PASS	AB=0.988;AC=12;AF=0.240;AN=50;BaseQRankSum=3.504;DP=710;FS=12.536;HRun=0;HaplotypeScore=130.7200;InbreedingCoeff=0.3149;MQ=55.28;MQ0=39;MQRankSum=0.161;QD=2.98;ReadPosRankSum=2.574;VQSLOD=1.9802;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:23:2.60:46,3,0	0/0:10,0:10:5.93:0,6,66	./.	0/0:102,0:27:0:0,0,0	./.	0/0:24,0:23:17.74:0,18,343	0/0:27,0:27:4.26:0,4,70	0/0:29,0:27:8.94:0,9,103	0/0:19,0:18:4.36:0,4,33	0/0:16,0:16:12.01:0,12,165	0/0:14,0:14:6.02:0,6,161	0/0:21,6:28:6.21:0,6,31	0/0:9,0:8:0.47:0,0,1	0/0:25,0:25:28.42:0,28,496	0/1:19,0:19:27.95:28,0,280	0/0:25,0:25:8.72:0,9,229	0/0:22,0:22:30.04:0,30,500	0/0:11,0:9:5.61:0,6,81	1/1:11,0:7:1.25:3,1,0	0/0:19,0:18:0:0,0,0	0/1:35,0:35:11.90:12,0,84	0/0:19,0:19:6.02:0,6,89	0/1:15,0:15:0:0,0,0	1/1:39,0:40:18.14:244,18,0	0/0:18,0:17:0:0,0,0	1/1:22,1:24:3.06:317,3,0	0/1:18,0:18:18.61:34,0,19	./.
chr10	70516104	.	T	TCA	479.12	PASS	AB=0.734;AC=8;AF=0.143;AN=56;BaseQRankSum=3.745;DP=617;FS=24.585;HRun=0;HaplotypeScore=88.2096;InbreedingCoeff=0.3200;MQ=49.83;MQ0=21;MQRankSum=-1.656;QD=3.77;ReadPosRankSum=-0.260;VQSLOD=0.6823;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,19:27:6.02:0,6,73	0/0:8,0:8:11.91:0,12,145	0/0:35,0:8:17.45:0,17,207	0/1:36,0:6:0.75:1,0,20	0/0:21,0:21:45.10:0,45,518	0/0:21,0:20:34.98:0,35,428	0/0:36,0:35:69.19:0,69,817	0/0:25,0:24:60.14:0,60,700	0/0:17,0:17:30.02:0,30,345	0/0:31,0:31:53.22:0,53,730	0/0:23,0:23:21.60:0,22,572	0/0:26,0:25:47.97:0,48,552	0/1:7,6:13:36.25:36,0,85	0/0:21,0:21:38.94:0,39,485	0/0:15,0:12:11.97:0,12,243	0/0:22,0:22:47.92:0,48,546	0/0:21,0:19:10.03:0,10,405	1/1:4,6:10:6.02:97,6,0	0/0:12,0:11:15.04:0,15,180	0/0:20,0:20:32.97:0,33,379	0/0:22,0:21:39.10:0,39,473	0/0:25,0:25:39.05:0,39,431	0/0:8,8:16:8.02:0,8,107	0/1:15,26:41:28.82:45,0,29	0/0:21,0:20:39.12:0,39,471	0/1:11,11:21:33.63:359,0,34	0/0:21,0:19:38.93:0,39,440	1/1:3,0:3:5.98:68,6,0
chr10	70524117	.	T	TTG	800.19	PASS	AB=0.868;AC=18;AF=0.360;AN=50;BaseQRankSum=2.781;DP=598;FS=12.671;HRun=0;HaplotypeScore=122.9613;InbreedingCoeff=0.4830;MQ=57.36;MQ0=7;MQRankSum=-1.866;QD=3.36;ReadPosRankSum=0.403;VQSLOD=2.0169;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:23:8.61:75,9,0	0/0:8,0:10:5.83:0,6,38	./.	./.	0/1:22,7:29:34.03:118,0,34	0/0:13,0:13:14.90:0,15,118	0/0:31,0:32:8.73:0,9,71	./.	0/0:21,0:21:11.81:0,12,106	1/1:24,0:21:12.49:126,12,0	1/1:11,8:21:9.02:115,9,0	0/0:7,0:7:3.01:0,3,32	1/1:13,0:12:8.94:68,9,0	0/0:16,0:19:8.78:0,9,71	0/0:22,0:22:32.96:0,33,321	0/0:19,0:22:32.88:0,33,323	0/0:32,0:37:40.72:0,41,334	0/1:11,11:22:15.51:71,0,16	0/0:19,0:19:5.48:0,5,49	0/0:29,0:30:32.63:0,33,284	0/1:26,0:25:13.74:14,0,78	0/0:20,0:20:11.85:0,12,116	1/1:22,0:22:3.01:33,3,0	1/1:20,0:19:9.01:93,9,0	0/0:15,0:16:8.85:0,9,79	1/1:25,0:25:19.21:189,19,0	0/0:22,0:22:14.80:0,15,147	0/1:11,0:10:11.75:72,0,12
chr10	70524681	.	C	CAAAAAAAGA	5768.42	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-6.166;DP=622;FS=3.582;HRun=0;HaplotypeScore=160.7109;InbreedingCoeff=0.9842;MQ=73.87;MQ0=0;MQRankSum=-10.157;QD=65.55;ReadPosRankSum=-0.016;VQSLOD=4.5930;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.26:0,90,2091	0/0:8,0:8:21.07:0,21,581	0/0:26,0:25:21.35:0,21,498	0/0:13,0:11:10.97:0,11,377	0/0:28,0:28:75.20:0,75,1757	0/0:30,0:30:75.23:0,75,1904	0/0:18,0:18:48.15:0,48,1165	0/0:25,0:25:51.16:0,51,1214	0/0:10,0:10:27.09:0,27,732	0/0:36,0:37:93.29:0,93,2255	0/0:25,0:25:66.21:0,66,1707	0/0:21,0:21:48.16:0,48,1155	1/1:5,19:27:45.15:2013,45,0	0/0:18,0:18:42.14:0,42,1113	0/0:15,0:15:30.08:0,30,693	0/0:31,0:31:84.29:0,84,2004	0/0:19,0:19:45.11:0,45,947	1/1:3,7:11:18.06:829,18,0	0/0:27,0:28:69.19:0,69,1444	0/0:26,0:26:60.17:0,60,1472	0/0:18,0:18:42.11:0,42,1031	0/0:25,0:25:48.16:0,48,1243	1/1:2,18:22:36.59:1657,37,0	1/1:7,19:28:30.95:1270,31,0	0/0:17,0:17:39.12:0,39,964	0/0:16,0:16:36.11:0,36,882	0/0:32,0:32:81.26:0,81,1900	0/0:13,0:13:39.13:0,39,1029
chr10	70525857	.	TTG	T	3678.10	PASS	AB=0.923;AC=14;AF=0.250;AN=56;BaseQRankSum=12.463;DP=829;FS=1.173;HRun=0;HaplotypeScore=99.5484;InbreedingCoeff=0.6515;MQ=63.81;MQ0=12;MQRankSum=0.233;QD=13.57;ReadPosRankSum=2.233;VQSLOD=3.6369;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,29:39:66.03:761,66,0	0/0:10,0:10:24.05:0,24,351	0/0:44,0:14:6.01:0,6,95	0/0:32,0:19:13.66:0,14,171	0/0:30,0:30:69.23:0,69,1082	0/0:21,1:23:33.25:0,33,580	0/0:33,2:35:31.47:0,31,1183	0/0:32,1:33:30.57:0,31,882	0/1:27,2:29:1.88:2,0,902	0/0:32,0:32:31.28:0,31,954	0/0:14,0:14:42.12:0,42,640	0/0:19,3:22:9.65:0,10,591	1/1:3,26:31:68.83:772,69,0	0/0:42,1:43:63.43:0,63,1392	0/0:22,1:23:21.62:0,22,795	0/0:31,0:32:72.81:0,73,1239	0/1:28,3:31:63.75:64,0,935	1/1:2,22:25:59.99:676,60,0	0/1:30,2:30:13.30:13,0,465	0/0:20,0:20:51.16:0,51,781	0/0:69,1:71:71.44:0,71,2018	0/1:17,2:19:0.25:0,0,409	1/1:5,16:21:41.96:476,42,0	1/1:7,34:40:78.23:915,78,0	0/0:20,2:22:9.58:0,10,585	0/0:38,1:39:60.76:0,61,1405	0/0:20,0:21:12.29:0,12,644	0/0:12,0:12:27.09:0,27,421
chr10	70528111	.	T	TG	4537.36	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.291;DP=693;FS=16.090;HRun=0;HaplotypeScore=73.1267;InbreedingCoeff=0.9972;MQ=100.72;MQ0=0;MQRankSum=-7.213;QD=43.63;ReadPosRankSum=2.032;VQSLOD=3.4469;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,1923	0/0:6,0:6:18.03:0,18,232	0/0:33,0:33:79.60:0,80,1157	0/0:46,0:46:99:0,126,1667	0/0:17,0:17:48.16:0,48,670	0/0:30,0:30:87.29:0,87,1215	0/0:25,0:25:75.25:0,75,1049	0/0:33,0:33:93.29:0,93,1256	0/0:22,0:22:66.22:0,66,922	0/0:23,0:23:69.23:0,69,965	0/0:16,0:16:48.16:0,48,670	0/0:30,0:30:90.30:0,90,1257	1/1:1,23:24:63.21:1007,63,0	0/0:29,0:29:87.29:0,87,1216	0/0:31,0:31:93.31:0,93,1298	0/0:22,0:22:63.21:0,63,881	0/0:22,0:22:66.22:0,66,921	1/1:1,19:20:57.19:902,57,0	0/0:20,0:20:60.20:0,60,836	0/0:23,0:23:66.22:0,66,923	0/0:27,0:27:81.27:0,81,1128	0/0:21,0:21:63.21:0,63,880	1/1:0,25:25:72.25:1148,72,0	1/1:1,33:35:93.32:1480,93,0	0/0:18,0:18:54.18:0,54,752	0/0:21,0:21:63.21:0,63,881	0/0:20,0:20:60.19:0,60,815	0/0:8,0:8:24.08:0,24,336
chr10	70529089	.	CTGTT	C	6545.12	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.992;DP=816;FS=3.711;HRun=0;HaplotypeScore=132.9134;InbreedingCoeff=0.9998;MQ=90.99;MQ0=1;MQRankSum=-5.566;QD=45.45;ReadPosRankSum=4.494;VQSLOD=5.2968;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,38:39:99:1803,99,0	0/0:14,0:14:30.10:0,30,800	0/0:37,0:37:93.13:0,93,2271	0/0:28,0:28:75.25:0,75,1805	0/0:35,0:35:96.32:0,96,2498	0/0:29,0:29:84.29:0,84,2149	0/0:27,0:27:75.26:0,75,1942	0/0:33,0:33:90.30:0,90,2272	0/0:29,0:29:72.25:0,72,1884	0/0:37,0:37:99:0,108,2875	0/0:14,0:14:42.14:0,42,1121	0/0:28,0:28:84.29:0,84,2220	1/1:0,32:32:93.32:1715,93,0	0/0:25,0:25:72.23:0,72,1866	0/0:46,0:46:99:0,138,3619	0/0:23,0:23:66.23:0,66,1704	0/0:30,0:30:84.27:0,84,2118	1/1:1,14:15:36.12:651,36,0	0/0:23,0:23:63.22:0,63,1657	0/0:38,0:38:99:0,108,2836	0/0:48,0:48:99:0,138,3386	0/0:28,0:28:81.28:0,81,2124	1/1:4,24:28:63.21:1109,63,0	1/1:2,27:29:69.70:1267,70,0	0/0:27,0:27:81.28:0,81,2156	0/0:28,0:28:75.26:0,75,1959	0/0:24,0:23:72.23:0,72,1834	0/0:21,0:21:60.18:0,60,1341
chr10	70529622	.	C	CT	67.85	PASS	AB=0.750;AC=7;AF=0.250;AN=28;BaseQRankSum=1.270;DP=39;FS=20.937;HRun=0;HaplotypeScore=26.7737;InbreedingCoeff=0.2776;MQ=161.78;MQ0=0;MQRankSum=-2.774;QD=7.54;ReadPosRankSum=1.167;VQSLOD=1.6028;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:1,1:2:2.99:0,3,42	./.	0/0:6,0:6:14.50:0,15,134	0/0:10,0:9:10.64:0,11,107	./.	0/0:2,0:2:6.02:0,6,84	1/1:2,2:4:0.94:69,1,0	0/0:2,0:2:6.02:0,6,84	./.	./.	1/1:0,1:1:3.01:43,3,0	./.	0/0:2,0:2:6.02:0,6,83	0/1:2,1:3:1.64:2,0,58	./.	./.	0/0:2,0:2:2.98:0,3,22	./.	./.	./.	0/0:1,0:1:3.01:0,3,42	./.	0/0:1,0:1:3.01:0,3,42	./.	./.	./.	1/1:0,1:1:3.01:46,3,0	0/0:1,0:1:3.01:0,3,42
chr10	70532582	.	A	AGATCATGGT	3990.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.352;DP=789;FS=0.000;HRun=0;HaplotypeScore=205.9184;InbreedingCoeff=1.0000;MQ=84.93;MQ0=0;MQRankSum=-9.238;QD=92.81;ReadPosRankSum=-1.007;VQSLOD=3.5641;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,22:43:90.31:3991,90,0	0/0:17,0:17:48.16:0,48,1517	0/0:21,0:21:63.20:0,63,1769	0/0:30,0:30:90.27:0,90,2576	0/0:17,0:16:48.16:0,48,1452	0/0:22,0:22:63.20:0,63,1771	0/0:20,0:20:60.21:0,60,1875	0/0:31,0:31:90.31:0,90,2803	0/0:27,0:27:78.27:0,78,2386	0/0:38,0:38:99:0,108,3146	0/0:20,0:20:57.20:0,57,1801	0/0:41,0:41:99:0,120,3609	0/0:22,0:22:66.23:0,66,2087	0/0:29,0:29:81.28:0,81,2503	0/0:30,0:30:90.31:0,90,2777	0/0:30,0:30:87.26:0,87,2489	0/0:33,0:33:99:0,99,3076	0/0:31,0:31:90.31:0,90,2738	0/0:23,0:23:66.20:0,66,1678	0/0:36,0:36:99:0,105,3269	0/0:43,0:43:99:0,123,3730	0/0:25,0:25:75.24:0,75,2274	0/0:25,0:25:72.25:0,72,2273	0/0:30,0:30:84.29:0,84,2613	0/0:22,0:22:66.21:0,66,1952	0/0:39,0:39:99:0,111,3315	0/0:29,0:29:84.27:0,84,2522	0/0:15,0:15:45.15:0,45,1423
chr10	70534102	.	CCTT	C	1439.22	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.634;DP=673;FS=1.458;HRun=0;HaplotypeScore=93.3112;InbreedingCoeff=0.9998;MQ=85.81;MQ0=0;MQRankSum=-5.312;QD=37.87;ReadPosRankSum=4.112;VQSLOD=4.5362;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,37:38:93.32:1534,93,0	0/0:20,0:20:60.21:0,60,1359	0/0:31,0:31:76.64:0,77,1685	0/0:15,0:15:37.68:0,38,727	0/0:22,0:22:66.23:0,66,1496	0/0:28,0:28:81.26:0,81,1757	0/0:18,0:18:51.16:0,51,1087	0/0:40,0:39:99:0,108,2390	0/0:23,0:23:66.23:0,66,1494	0/0:27,0:27:78.27:0,78,1754	0/0:16,0:16:48.16:0,48,1080	0/0:15,0:15:45.14:0,45,976	0/0:30,0:30:87.30:0,87,1963	0/0:14,0:14:42.13:0,42,886	0/0:23,0:23:69.24:0,69,1556	0/0:17,0:17:48.15:0,48,1045	0/0:33,0:33:96.31:0,96,2104	0/0:35,0:35:99:0,99,2078	0/0:27,0:27:78.26:0,78,1655	0/0:24,0:24:69.24:0,69,1547	0/0:18,0:18:54.19:0,54,1222	0/0:19,0:19:57.20:0,57,1276	0/0:25,0:25:72.23:0,72,1579	0/0:20,0:20:57.20:0,57,1272	0/0:28,0:28:84.27:0,84,1835	0/0:30,0:30:90.31:0,90,2024	0/0:23,0:23:66.23:0,66,1478	0/0:14,0:14:42.14:0,42,944
chr10	70534755	.	A	AG	2600.41	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-7.984;DP=704;FS=2.129;HRun=5;HaplotypeScore=71.7226;InbreedingCoeff=0.9987;MQ=86.91;MQ0=0;MQRankSum=-1.729;QD=27.96;ReadPosRankSum=-0.011;VQSLOD=3.6335;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,1185	0/0:8,0:8:21.03:0,21,215	0/0:25,0:25:56.77:0,57,570	0/0:24,0:24:62.40:0,62,617	0/0:25,0:25:69.17:0,69,741	0/0:24,0:24:69.17:0,69,742	0/0:23,0:23:69.15:0,69,732	0/0:37,0:37:96.22:0,96,1014	0/0:17,0:17:48.12:0,48,516	0/0:23,0:23:57.13:0,57,607	0/0:25,0:25:60.15:0,60,645	0/0:28,0:28:78.15:0,78,826	1/1:5,18:23:53.86:709,54,0	0/0:29,0:29:72.16:0,72,765	0/0:23,0:23:60.15:0,60,645	0/0:21,0:21:60.12:0,60,635	0/0:23,0:23:66.11:0,66,689	1/1:1,19:20:54.18:711,54,0	0/0:23,0:23:60.12:0,60,629	0/0:29,0:29:75.19:0,75,806	0/0:29,0:29:87.18:0,87,916	0/0:29,0:29:84.21:0,84,902	1/1:6,14:20:30.10:394,30,0	1/1:3,27:30:72.23:947,72,0	0/0:36,0:36:99:0,105,1127	0/0:34,0:34:81.19:0,81,864	0/0:23,0:23:63.10:0,63,651	0/0:13,0:13:36.09:0,36,387
chr10	70535242	.	C	CT	3074.35	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.954;DP=774;FS=3.880;HRun=2;HaplotypeScore=76.2534;InbreedingCoeff=0.9997;MQ=83.51;MQ0=0;MQRankSum=-1.338;QD=34.54;ReadPosRankSum=2.728;VQSLOD=4.2470;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,1526	0/0:15,0:15:45.14:0,45,558	0/0:26,0:26:28.22:0,28,597	0/0:33,0:33:54.85:0,55,792	0/0:30,0:30:87.26:0,87,1065	0/0:29,0:29:84.26:0,84,1041	0/0:23,0:23:69.22:0,69,855	0/0:39,0:39:99:0,108,1318	0/0:29,0:29:87.24:0,87,1061	0/0:26,0:26:75.23:0,75,919	0/0:21,0:21:60.17:0,60,730	0/0:32,0:32:96.30:0,96,1190	1/1:2,27:29:63.21:907,63,0	0/0:39,0:39:99:0,108,1313	0/0:30,0:30:87.27:0,87,1078	0/0:24,0:24:69.22:0,69,854	0/0:30,0:30:87.26:0,87,1064	1/1:1,19:19:60.20:858,60,0	0/0:24,0:24:63.17:0,63,750	0/0:29,0:29:84.25:0,84,1029	0/0:38,0:38:99:0,102,1252	0/0:34,0:34:96.29:0,96,1178	1/1:0,26:26:69.23:994,69,0	1/1:0,14:14:33.11:475,33,0	0/0:24,0:24:69.19:0,69,830	0/0:24,0:24:66.21:0,66,818	0/0:30,0:29:87.27:0,87,1077	0/0:13,0:13:39.12:0,39,483
chr10	70537151	.	TCA	T	318.10	PASS	AB=0.935;AC=16;AF=0.348;AN=46;BaseQRankSum=3.411;DP=546;FS=0.000;HRun=0;HaplotypeScore=63.1384;InbreedingCoeff=0.3195;MQ=70.75;MQ0=15;MQRankSum=0.400;QD=1.63;ReadPosRankSum=2.188;VQSLOD=1.3905;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:6.02:0,6,81	0/0:8,0:8:12.04:0,12,173	./.	./.	0/0:11,0:11:6.02:0,6,85	0/0:14,0:12:6.02:0,6,84	0/0:29,0:28:12.03:0,12,152	./.	0/0:19,0:18:0.47:0,0,1	0/0:16,0:16:9.02:0,9,113	0/0:4,0:4:3.01:0,3,39	0/0:17,0:17:0.47:0,0,1	1/1:15,0:15:8.52:42,9,0	0/0:15,0:15:12.01:0,12,144	0/0:14,0:14:12.03:0,12,157	0/1:11,1:12:22.80:23,0,78	1/1:22,3:25:3.01:32,3,0	0/1:21,6:25:8.76:69,0,9	./.	./.	0/0:35,0:35:5.99:0,6,49	0/0:20,0:20:3.01:0,3,44	1/1:12,0:14:5.99:55,6,0	1/1:23,9:32:18.05:189,18,0	0/1:21,0:21:16.63:17,0,59	1/1:20,0:20:2.84:14,3,0	0/1:18,0:18:6.08:6,0,195	1/1:10,0:10:2.84:14,3,0
chr10	70539193	.	ATT	A	3654.08	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.951;DP=774;FS=9.184;HRun=10;HaplotypeScore=98.1989;InbreedingCoeff=0.9393;MQ=79.11;MQ0=2;MQRankSum=-1.537;QD=26.29;ReadPosRankSum=4.651;VQSLOD=2.9363;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,43:46:99:1304,117,0	0/0:8,0:9:18.06:0,18,267	0/0:27,0:25:36.12:0,36,594	0/0:14,0:17:28.69:0,29,342	0/0:31,0:31:81.27:0,81,1266	0/0:20,0:19:54.18:0,54,855	0/0:25,0:25:66.22:0,66,1043	0/0:31,0:31:87.30:0,87,1377	0/0:30,0:30:72.23:0,72,1120	0/0:37,0:37:99:0,102,1578	0/0:3,0:30:87.14:0,87,856	0/0:22,0:22:54.04:0,54,802	1/1:7,20:27:0.63:513,1,0	0/0:26,0:27:71.72:0,72,1080	0/0:48,0:49:99:0,126,1907	0/0:32,0:34:95.77:0,96,1452	0/0:34,0:34:90.29:0,90,1381	1/1:1,18:19:51.13:568,51,0	0/0:24,0:24:60.17:0,60,881	0/0:23,0:23:57.18:0,57,883	0/0:39,0:39:99:0,108,1691	0/0:23,0:24:65.69:0,66,982	1/1:3,17:19:48.13:533,48,0	1/1:1,26:26:66.18:736,66,0	0/0:27,0:29:77.75:0,78,1197	0/0:27,0:27:63.20:0,63,958	0/0:31,0:31:89.79:0,90,1372	0/0:14,0:14:39.12:0,39,593
chr10	70542111	.	GT	G	442.69	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=5.057;DP=745;FS=2.289;HRun=2;HaplotypeScore=65.0979;InbreedingCoeff=0.9828;MQ=31.41;MQ0=202;MQRankSum=-0.181;QD=12.65;ReadPosRankSum=-0.065;VQSLOD=2.2990;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,27:19:42.13:537,42,0	0/0:8,0:6:18.06:0,18,269	./.	./.	0/0:29,0:17:45.15:0,45,669	0/0:22,0:15:42.14:0,42,627	0/0:22,0:13:39.13:0,39,565	0/0:29,0:18:51.14:0,51,733	0/0:28,0:17:42.14:0,42,619	0/0:41,0:27:81.19:0,81,1147	0/0:27,0:22:54.15:0,54,784	0/0:35,0:25:57.19:0,57,852	0/0:34,0:24:69.23:0,69,1033	0/0:38,0:25:75.21:0,75,1097	0/0:34,0:24:66.18:0,66,962	0/0:25,0:13:39.13:0,39,583	0/0:41,0:22:42.14:0,42,622	0/0:37,0:22:48.16:0,48,707	0/0:17,0:8:21.03:0,21,290	0/0:25,0:20:57.19:0,57,827	0/0:33,0:17:41.76:0,42,621	0/0:19,0:12:27.09:0,27,404	0/0:27,0:25:75.19:0,75,1061	0/0:39,0:20:51.13:0,51,737	0/0:20,0:18:48.12:0,48,693	0/0:39,0:20:60.20:0,60,896	0/0:29,0:19:49.37:0,49,755	0/0:12,0:8:21.07:0,21,314
chr10	70545898	.	AACACAC	A	150.92	PASS	AB=1.000;AC=3;AF=0.060;AN=50;BaseQRankSum=3.795;DP=458;FS=17.405;HRun=0;HaplotypeScore=102.5666;InbreedingCoeff=0.2791;MQ=64.84;MQ0=3;MQRankSum=-1.368;QD=2.25;ReadPosRankSum=-0.189;VQSLOD=0.6124;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:26,7:34:15.03:217,15,0	0/0:9,0:9:12.04:0,12,285	./.	./.	0/0:10,0:10:12.04:0,12,255	0/0:15,0:15:12.04:0,12,252	0/0:21,0:21:15.05:0,15,367	0/0:22,0:21:2.98:0,3,21	0/0:11,0:11:12.03:0,12,209	0/0:15,0:15:12.04:0,12,302	0/0:14,0:14:12.04:0,12,285	0/0:14,0:14:12.20:0,12,324	0/0:14,0:14:8.06:0,8,125	0/0:11,0:11:12.04:0,12,239	0/0:15,0:16:20.17:0,20,475	0/0:17,0:16:15.03:0,15,306	0/0:20,0:20:21.07:0,21,526	0/0:18,0:16:15.52:0,16,430	0/0:7,0:7:9.03:0,9,255	0/0:13,0:12:6.02:0,6,170	0/1:33,0:33:33.22:33,0,487	0/0:11,0:11:3.01:0,3,96	0/0:10,0:10:12.70:0,13,123	0/0:19,0:19:7.58:0,8,163	0/0:18,0:19:5.05:0,5,74	0/0:17,0:17:14.16:0,14,262	./.	0/0:8,0:8:3.48:0,3,47
chr10	70547189	.	C	CGT	689.47	PASS	AB=0.993;AC=10;AF=0.179;AN=56;BaseQRankSum=-1.204;DP=733;FS=19.255;HRun=0;HaplotypeScore=110.8355;InbreedingCoeff=0.3740;MQ=59.73;MQ0=14;MQRankSum=1.105;QD=3.61;ReadPosRankSum=-1.028;VQSLOD=1.0755;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:2.94:0,3,154	0/0:16,0:16:32.25:0,32,308	0/1:39,0:21:0:0,0,0	0/1:35,0:13:0:0,0,0	0/0:24,0:24:35.79:0,36,323	0/0:16,0:20:17.81:0,18,149	0/0:30,0:33:50.61:0,51,439	0/0:20,0:20:15.37:0,15,112	0/0:17,0:17:32.92:0,33,299	0/0:37,0:38:37.45:0,37,501	0/0:18,0:18:8.98:0,9,79	0/0:37,0:36:54.83:0,55,479	0/0:7,0:18:14.20:0,14,70	0/0:24,0:24:32.10:0,32,249	1/1:4,11:15:12.04:183,12,0	0/1:10,0:9:20.28:77,0,20	0/0:41,0:40:74.74:0,75,692	0/0:50,0:49:57.04:0,57,605	0/1:17,0:17:21.89:22,0,49	0/1:21,1:22:9.82:10,0,219	0/0:35,0:33:56.87:0,57,520	0/0:23,0:22:21.10:0,21,262	0/0:13,0:24:17:0,17,83	0/0:9,0:20:5.61:0,6,33	0/0:18,0:22:35.64:0,36,308	1/1:19,14:33:38.95:396,39,0	0/0:18,0:18:32.88:0,33,294	0/1:19,0:19:69.14:143,0,69
chr10	70548544	.	A	AAAACAAAC	1246.98	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.417;DP=686;FS=4.980;HRun=0;HaplotypeScore=167.5753;InbreedingCoeff=0.6792;MQ=70.73;MQ0=1;MQRankSum=-6.885;QD=41.57;ReadPosRankSum=-2.810;VQSLOD=2.6596;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,14:30:36.12:1341,36,0	0/0:10,0:10:9.03:0,9,195	0/0:30,0:25:1.73:0,2,73	0/0:23,0:14:6.02:0,6,95	0/0:32,0:32:81.25:0,81,1925	0/0:18,0:18:36.12:0,36,901	0/0:28,0:28:13.76:0,14,780	0/0:32,0:32:33.09:0,33,554	0/0:22,0:22:36.12:0,36,901	0/0:27,0:29:57.19:0,57,1301	0/0:21,0:21:42.14:0,42,1003	0/0:31,0:31:54.17:0,54,1244	0/0:20,0:20:44.81:0,45,1011	0/0:22,0:23:36.12:0,36,851	0/0:20,0:20:33.10:0,33,778	0/0:19,0:19:42.14:0,42,1020	0/0:45,0:45:87.71:0,88,2035	0/0:24,0:24:36:0,36,974	0/0:14,0:14:21.10:0,21,596	0/0:27,0:27:48.16:0,48,1068	0/0:14,0:15:36.11:0,36,800	0/0:20,0:21:36.12:0,36,850	0/0:32,0:32:69.20:0,69,1573	0/0:30,0:30:45.14:0,45,1039	0/0:19,0:19:42.14:0,42,1030	0/0:28,0:28:57.20:0,57,1393	0/0:38,0:37:57.20:0,57,1365	0/0:5,0:5:9.03:0,9,225
chr10	70553784	.	TC	T	4313.47	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.484;DP=694;FS=2.255;HRun=1;HaplotypeScore=69.1479;InbreedingCoeff=0.9997;MQ=86.46;MQ0=1;MQRankSum=-2.332;QD=37.19;ReadPosRankSum=1.468;VQSLOD=5.4332;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,147,2265	0/0:10,0:10:30.10:0,30,469	0/0:32,0:32:76.45:0,76,1234	0/0:16,0:16:44.90:0,45,605	0/0:20,0:20:60.18:0,60,914	0/0:18,0:18:51.17:0,51,795	0/0:26,0:26:78.27:0,78,1214	0/0:22,0:22:66.18:0,66,934	0/0:16,0:16:48.15:0,48,726	0/0:28,0:28:84.14:0,84,1261	0/0:14,0:14:42.12:0,42,622	0/0:23,0:23:66.19:0,66,982	1/1:0,29:29:75.25:1049,75,0	0/0:25,0:25:75.22:0,75,1123	0/0:29,0:29:87.27:0,87,1316	0/0:23,0:23:69.22:0,69,1054	0/0:34,0:34:99:0,102,1551	1/1:0,25:25:69.02:964,69,0	0/0:25,0:25:69.19:0,69,1032	0/0:23,0:23:63.20:0,63,954	0/0:54,0:53:99:0,156,2318	0/0:21,0:21:63.20:0,63,963	1/1:0,29:29:81.18:1087,81,0	1/1:0,33:33:87.29:1213,87,0	0/0:16,0:16:48.15:0,48,727	0/0:25,0:25:75.24:0,75,1153	0/0:19,0:19:57.19:0,57,891	0/0:10,0:10:30.08:0,30,446
chr10	70554116	.	ATCTCTCTCTCTCTCTCTCTCTCTC	A	507.18	PASS	AC=6;AF=0.136;AN=44;BaseQRankSum=3.259;DP=552;FS=1.946;HRun=0;HaplotypeScore=279.9058;InbreedingCoeff=0.5196;MQ=66.50;MQ0=19;MQRankSum=-1.144;QD=14.09;ReadPosRankSum=1.537;VQSLOD=2.4586;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:6.01:0,6,299	./.	0/0:21,0:13:3.01:0,3,44	./.	./.	0/0:30,0:29:15.05:0,15,1199	0/0:20,0:19:13.29:0,13,718	0/0:40,0:37:23.75:0,24,890	0/0:16,0:16:6.02:0,6,394	0/0:22,0:21:9.03:0,9,719	./.	0/0:16,0:15:6:0,6,352	1/1:7,2:8:6.02:374,6,0	0/0:17,0:17:13.82:0,14,435	0/0:13,0:13:9.03:0,9,698	0/0:14,0:17:12.03:0,12,602	0/0:20,0:20:19.29:0,19,1130	1/1:13,0:11:3.01:53,3,0	0/0:23,0:22:23.42:0,23,861	0/0:17,0:17:6.49:0,6,641	0/0:18,0:17:9.01:0,9,494	0/0:16,0:15:5.96:0,6,409	./.	1/1:11,3:14:3.01:187,3,0	0/0:21,0:21:9.92:0,10,579	0/0:27,0:27:21.07:0,21,1908	0/0:28,0:28:12.04:0,12,1074	./.
chr10	70555200	.	TTG	T	573.30	PASS	AB=0.933;AC=20;AF=0.385;AN=52;BaseQRankSum=1.884;DP=643;FS=0.830;HRun=0;HaplotypeScore=85.0087;InbreedingCoeff=-0.4584;MQ=59.91;MQ0=7;MQRankSum=0.466;QD=1.25;ReadPosRankSum=0.422;VQSLOD=1.4529;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:14.84:0,15,217	0/0:8,0:8:14.41:0,14,176	./.	./.	0/1:19,2:21:52.89:53,0,184	0/1:22,0:22:65.45:65,0,263	0/1:28,3:31:58.99:59,0,117	1/1:26,0:25:1.20:29,1,0	0/1:20,2:21:33.32:33,0,305	0/1:19,0:19:40.17:40,0,183	0/0:15,0:15:15.42:0,15,288	0/1:21,1:22:18.06:18,0,120	0/1:18,1:19:6.05:6,0,265	0/1:21,1:21:18.17:18,0,164	0/1:15,0:16:7.06:7,0,103	0/1:25,0:25:3.70:4,0,313	0/1:19,5:24:99:102,0,236	0/1:19,1:20:0.92:1,0,284	0/1:17,1:19:29:29,0,149	0/0:15,0:15:6.02:0,6,83	0/1:58,1:59:65.78:66,0,388	0/0:20,0:20:19.94:0,20,265	0/0:9,0:9:11.30:0,11,136	0/1:36,3:39:8.79:9,0,599	0/0:23,0:23:29.20:0,29,354	0/1:23,0:22:18.03:114,0,18	0/1:15,3:18:8.93:9,0,248	0/1:7,2:9:35.93:57,0,36
chr10	70555415	.	C	CG	1396.08	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=1.158;DP=466;FS=4.050;HRun=1;HaplotypeScore=58.1870;InbreedingCoeff=0.8825;MQ=51.55;MQ0=6;MQRankSum=-0.269;QD=27.37;ReadPosRankSum=0.149;VQSLOD=3.3565;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.14:0,66,804	0/0:4,0:4:9.03:0,9,116	0/0:12,1:1:2.98:0,3,21	0/0:12,0:5:1.73:0,2,27	0/0:16,0:16:33.06:0,33,393	0/0:27,0:26:77.97:0,78,915	0/0:28,0:24:62.98:0,63,746	0/0:25,0:25:62.76:0,63,705	0/0:19,0:17:42.08:0,42,505	0/0:23,0:23:66.15:0,66,798	0/0:14,0:14:35.99:0,36,376	0/0:23,0:22:48.10:0,48,572	1/1:3,5:8:18.06:265,18,0	0/0:17,0:16:33.09:0,33,409	0/0:13,0:13:33.04:0,33,379	0/0:13,0:13:30.10:0,30,384	0/0:22,0:22:54.17:0,54,694	1/1:5,6:11:21.07:301,21,0	0/0:16,0:16:39.09:0,39,484	0/0:11,0:11:30.08:0,30,362	0/0:12,0:12:29.99:0,30,310	0/0:22,0:22:60.10:0,60,691	1/1:7,7:13:32.72:374,33,0	1/1:9,9:18:42.14:615,42,0	0/0:14,0:14:36.07:0,36,410	0/0:15,0:15:44.96:0,45,524	0/0:18,0:18:48.12:0,48,587	0/0:13,0:13:33.11:0,33,425
chr10	70555429	.	CA	C	387.82	PASS	AB=0.839;AC=12;AF=0.214;AN=56;BaseQRankSum=6.963;DP=524;FS=2.372;HRun=14;HaplotypeScore=68.9192;InbreedingCoeff=0.3478;MQ=59.85;MQ0=10;MQRankSum=0.199;QD=3.03;ReadPosRankSum=2.027;VQSLOD=-0.1554;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,1:25:29.41:97,29,0	0/1:4,1:5:11.57:12,0,47	0/0:20,0:6:7.06:0,7,51	0/0:15,0:11:7.42:0,7,82	0/0:16,1:17:6.39:0,6,190	0/0:20,1:22:13.82:0,14,271	0/0:25,2:24:13.99:0,14,414	0/0:31,0:33:50.27:0,50,445	0/0:16,1:17:29.67:0,30,239	0/0:23,2:25:9.89:0,10,377	0/0:16,1:17:0.50:0,0,147	0/0:16,1:19:13.63:0,14,152	1/1:4,3:7:11.12:69,11,0	0/0:19,0:19:34.98:0,35,291	0/0:15,0:16:15.22:0,15,234	0/0:17,0:17:32.24:0,32,256	0/0:23,2:26:30.93:0,31,370	0/1:8,4:13:0.95:86,0,1	0/0:21,1:23:23.54:0,24,368	0/1:14,0:15:12.38:12,0,66	0/1:15,1:16:8.13:8,0,218	0/0:24,2:26:19.78:0,20,456	0/1:7,4:11:8.38:67,0,8	1/1:13,2:18:30.25:187,30,0	0/0:8,0:8:9.48:0,9,85	0/0:21,0:22:4.11:0,4,295	0/0:19,0:20:32.13:0,32,311	0/1:14,2:16:9.89:10,0,195
chr10	70558404	.	A	AGGG	277.28	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.017;DP=579;FS=1.251;HRun=0;HaplotypeScore=90.2494;InbreedingCoeff=0.9969;MQ=69.40;MQ0=1;MQRankSum=-4.077;QD=23.11;ReadPosRankSum=-3.675;VQSLOD=2.6529;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,4:12:30.01:372,30,0	0/0:12,0:12:36.12:0,36,650	0/0:16,0:15:38.83:0,39,579	0/0:15,0:14:37.81:0,38,485	0/0:24,0:24:72.25:0,72,1329	0/0:12,0:12:36.12:0,36,671	0/0:41,0:41:99:0,117,2022	0/0:24,0:24:66.21:0,66,1172	0/0:18,0:18:54.19:0,54,995	0/0:21,0:21:59.87:0,60,1054	0/0:16,0:16:42.14:0,42,777	0/0:18,0:18:54.19:0,54,1001	0/0:22,0:22:66.21:0,66,1199	0/0:17,0:17:48.16:0,48,895	0/0:19,0:19:57.19:0,57,1034	0/0:17,0:17:48.16:0,48,895	0/0:27,0:27:81.28:0,81,1502	0/0:26,0:26:75.22:0,75,1357	0/0:19,0:19:57.20:0,57,1062	0/0:18,0:18:50.91:0,51,878	0/0:52,0:51:99:0,150,2745	0/0:16,0:16:45.15:0,45,818	0/0:15,0:15:39.13:0,39,727	0/0:28,0:28:84.29:0,84,1566	0/0:21,0:21:57.16:0,57,1006	0/0:27,0:27:81.25:0,81,1430	0/0:17,0:17:48.13:0,48,831	0/0:9,0:9:24.08:0,24,434
chr10	70559173	.	TGC	T	825.29	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.849;DP=819;FS=19.580;HRun=0;HaplotypeScore=115.1551;InbreedingCoeff=0.9855;MQ=65.51;MQ0=8;MQRankSum=0.188;QD=13.75;ReadPosRankSum=1.884;VQSLOD=1.8401;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,26:60:70.62:920,71,0	0/0:10,0:10:23.98:0,24,352	0/0:33,0:9:23.82:0,24,190	0/0:37,0:15:28.50:0,29,213	0/0:14,0:14:42.06:0,42,711	0/0:28,0:28:67.97:0,68,1185	0/0:34,0:34:52.90:0,53,1323	0/0:31,0:31:41.87:0,42,1112	0/0:24,0:24:41.43:0,41,1056	0/0:31,0:30:73.70:0,74,1229	0/0:10,0:10:24.08:0,24,446	0/0:27,0:27:20.31:0,20,885	0/0:39,0:39:86.62:0,87,873	0/0:29,0:29:69.88:0,70,1273	0/0:24,0:24:57.73:0,58,1031	0/0:19,0:19:40.57:0,41,758	0/0:44,0:44:94.98:0,95,1952	0/0:30,0:30:55.56:0,56,650	0/0:24,0:24:50.47:0,50,769	0/0:25,0:25:47.61:0,48,977	0/0:56,0:56:87.15:0,87,2217	0/0:20,0:20:23.24:0,23,782	0/0:19,0:19:32.88:0,33,359	0/0:40,0:40:80.59:0,81,852	0/0:21,0:21:48.80:0,49,864	0/0:43,0:43:54.55:0,55,1623	0/0:25,0:25:39.42:0,39,817	0/0:22,0:22:54:0,54,860
chr10	70559176	.	G	GCACA	4299.96	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=-5.015;DP=815;FS=3.878;HRun=0;HaplotypeScore=135.9223;InbreedingCoeff=0.8029;MQ=63.15;MQ0=9;MQRankSum=-0.239;QD=22.28;ReadPosRankSum=1.819;VQSLOD=4.7952;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:63,0:63:43.33:43,0,394	0/0:8,0:9:5.20:0,5,198	./.	0/0:36,0:13:3.62:0,4,50	0/0:14,0:14:39.10:0,39,589	0/0:26,0:27:44.02:0,44,845	0/0:29,0:31:50.29:0,50,1110	0/0:27,0:30:27.11:0,27,628	0/0:25,0:25:44.94:0,45,804	0/0:29,0:29:44.20:0,44,926	0/0:9,0:9:24.07:0,24,370	0/0:21,0:26:53.99:0,54,783	1/1:9,26:39:62.42:1360,62,0	0/0:27,0:28:71.61:0,72,1072	0/0:24,0:26:60.14:0,60,912	0/0:19,0:19:22.64:0,23,528	0/0:39,0:44:89.13:0,89,1557	1/1:5,22:32:47.90:1083,48,0	0/0:22,0:23:42.11:0,42,635	0/0:22,0:25:41.42:0,41,728	0/0:51,0:57:99:0,107,1914	0/0:20,0:23:63.12:0,63,854	1/1:4,14:21:26.62:600,27,0	1/1:10,23:38:56.40:1213,56,0	0/0:19,0:21:37.06:0,37,700	0/0:39,0:45:88.09:0,88,1409	0/0:22,0:24:51.06:0,51,714	0/0:19,0:19:44.72:0,45,592
chr10	70559196	.	ACG	A	664.20	PASS	AB=0.968;AC=3;AF=0.054;AN=56;BaseQRankSum=10.904;DP=827;FS=6.959;HRun=0;HaplotypeScore=110.7135;InbreedingCoeff=0.6375;MQ=58.43;MQ0=19;MQRankSum=-0.203;QD=6.99;ReadPosRankSum=1.878;VQSLOD=2.9526;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,50:64:28.71:757,29,0	0/0:10,0:10:26.85:0,27,369	0/0:25,1:1:0:0,0,0	0/0:37,0:8:15.60:0,16,175	0/0:17,0:17:51.08:0,51,779	0/0:25,0:25:58.98:0,59,1105	0/0:36,0:36:71.90:0,72,1414	0/0:30,0:30:38.34:0,38,815	0/0:29,0:29:42.97:0,43,1113	0/0:30,0:29:53.63:0,54,1196	0/0:11,0:11:30.02:0,30,461	0/0:25,0:25:7.29:0,7,834	0/0:36,0:36:25.43:0,25,562	0/0:31,0:31:81.39:0,81,1358	0/0:27,0:27:66.84:0,67,1211	0/0:23,0:23:52.40:0,52,840	0/0:40,0:40:81.98:0,82,1804	0/1:29,1:30:6.29:6,0,360	0/0:23,0:22:42.03:0,42,712	0/0:27,0:27:50.59:0,51,962	0/0:64,0:64:99:0,100,2363	0/0:29,0:29:49.41:0,49,1079	0/0:21,0:21:27.22:0,27,277	0/0:36,0:36:61.90:0,62,617	0/0:23,0:23:40.69:0,41,876	0/0:40,0:40:48.65:0,49,1563	0/0:18,0:18:29.67:0,30,803	0/0:18,0:18:50.73:0,51,738
chr10	70560790	.	A	ATT	1663.68	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.784;DP=669;FS=0.000;HRun=8;HaplotypeScore=75.6284;InbreedingCoeff=0.9976;MQ=84.28;MQ0=0;MQRankSum=-4.534;QD=31.39;ReadPosRankSum=-0.134;VQSLOD=3.6052;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,49:53:99:1759,111,0	0/0:9,0:9:24.04:0,24,256	0/0:22,0:22:63.13:0,63,667	0/0:23,0:24:53.77:0,54,563	0/0:21,0:21:39.08:0,39,435	0/0:26,0:26:69.14:0,69,747	0/0:22,0:22:57.11:0,57,616	0/0:28,0:28:60.11:0,60,669	0/0:24,0:24:57.13:0,57,635	0/0:19,0:20:56.89:0,57,614	0/0:17,0:17:45.10:0,45,498	0/0:28,0:29:74.91:0,75,804	0/0:22,0:22:57.14:0,57,635	0/0:21,0:21:63.17:0,63,702	0/0:29,0:29:84.21:0,84,927	0/0:24,0:24:72.19:0,72,803	0/0:34,0:34:89.84:0,90,1002	0/0:25,0:25:66.16:0,66,736	0/0:21,0:21:42.07:0,42,468	0/0:19,0:19:48.09:0,48,522	0/0:42,0:42:99:0,105,1170	0/0:25,0:25:72.18:0,72,802	0/0:18,0:18:42.09:0,42,468	0/0:15,0:15:42.10:0,42,468	0/0:22,0:22:57.15:0,57,635	0/0:21,0:21:54.10:0,54,589	0/0:23,0:22:57.11:0,57,625	0/0:13,0:13:36.10:0,36,401
chr10	70562789	.	CTGAA	C	2147.52	PASS	AB=0.955;AC=9;AF=0.161;AN=56;BaseQRankSum=10.488;DP=688;FS=1.168;HRun=0;HaplotypeScore=118.0606;InbreedingCoeff=0.8417;MQ=72.92;MQ0=1;MQRankSum=-0.346;QD=21.69;ReadPosRankSum=1.239;VQSLOD=3.6673;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:31:39.09:0,39,623	0/0:21,0:21:45.15:0,45,1071	0/0:16,0:15:9.03:0,9,219	0/0:20,0:18:15:0,15,293	0/0:28,0:28:66.23:0,66,1590	0/0:31,0:31:63.22:0,63,1504	0/0:25,0:25:45.15:0,45,1092	0/0:31,0:31:45.15:0,45,994	0/0:28,0:28:57.17:0,57,1240	0/0:23,0:23:48.16:0,48,1127	0/1:20,1:21:3.60:4,0,947	0/0:19,0:19:39.13:0,39,920	1/1:3,11:14:27.09:439,27,0	0/0:26,0:26:54.19:0,54,1310	0/0:30,0:30:54.19:0,54,1283	0/0:27,0:27:54.19:0,54,1250	0/0:41,0:41:81.26:0,81,1843	1/1:7,15:22:4.20:688,4,0	0/0:17,0:17:18.06:0,18,406	0/0:26,1:27:17.41:0,17,1468	0/0:25,0:25:48.16:0,48,1084	0/0:16,0:16:36.11:0,36,825	1/1:7,18:25:45.07:731,45,0	1/1:5,12:17:27.09:439,27,0	0/0:20,0:20:36.12:0,36,850	0/0:33,0:33:69.24:0,69,1637	0/0:25,0:25:60.17:0,60,1345	0/0:29,0:29:63.19:0,63,1382
chr10	70562980	.	A	AAATGAATG	3097.20	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-2.234;DP=628;FS=3.214;HRun=0;HaplotypeScore=151.8444;InbreedingCoeff=0.8306;MQ=58.56;MQ0=5;MQRankSum=-8.531;QD=32.26;ReadPosRankSum=-3.463;VQSLOD=3.0951;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:3:27,3,0	0/0:17,0:17:45.15:0,45,1141	0/0:14,0:8:20.99:0,21,246	0/1:12,0:9:7.83:8,0,247	0/0:26,0:26:63.12:0,63,1478	0/0:28,0:28:66.20:0,66,1584	0/0:15,0:15:27.09:0,27,682	0/0:33,0:32:51.16:0,51,1252	0/0:20,0:20:51.15:0,51,1225	0/0:35,0:35:75.24:0,75,1885	0/0:28,0:28:66.23:0,66,1695	0/0:19,0:19:45.14:0,45,1113	1/1:2,5:9:9.03:378,9,0	0/0:28,0:28:60.19:0,60,1458	0/0:22,0:22:54.19:0,54,1410	0/0:24,0:23:54.17:0,54,1345	0/0:30,0:30:72.25:0,72,1843	1/1:17,3:19:35.95:845,36,0	0/0:16,0:16:33.10:0,33,761	0/0:23,0:23:54.19:0,54,1402	0/0:23,0:23:57.18:0,57,1411	0/0:21,0:21:51.18:0,51,1336	1/1:9,20:30:42.62:1623,43,0	1/1:4,6:10:9.03:378,9,0	0/0:23,0:23:57.18:0,57,1362	0/0:41,0:41:99:0,105,2530	0/0:33,0:33:81.27:0,81,1933	0/0:13,0:13:33.09:0,33,809
chr10	70563127	.	C	CCATTCATT	2008.49	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=0.484;DP=652;FS=0.000;HRun=0;HaplotypeScore=158.2099;InbreedingCoeff=0.8976;MQ=61.83;MQ0=1;MQRankSum=-6.983;QD=26.78;ReadPosRankSum=-1.008;VQSLOD=2.7186;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:60.21:0,60,1522	0/0:13,0:13:24.08:0,24,581	0/0:10,0:10:5.99:0,6,98	0/0:9,0:7:6.01:0,6,61	0/0:39,0:39:81.24:0,81,1842	0/0:23,0:23:51.16:0,51,1243	0/0:17,0:17:39.11:0,39,888	0/0:44,0:44:54.12:0,54,1047	0/0:24,0:24:45.13:0,45,990	0/0:40,0:40:84.27:0,84,1927	0/0:16,0:16:30.04:0,30,555	0/0:17,0:17:33.09:0,33,738	1/1:9,7:17:27.03:1027,27,0	0/0:23,0:23:39.13:0,39,989	0/0:26,0:26:60.20:0,60,1463	0/0:24,0:24:39.13:0,39,989	0/0:10,0:10:21.07:0,21,533	1/1:21,8:29:14.48:495,14,0	0/0:20,0:19:33.10:0,33,716	0/0:28,0:28:57.18:0,57,1395	0/0:18,0:18:36.10:0,36,813	0/0:30,0:30:54.18:0,54,1320	1/1:12,6:20:12.04:495,12,0	1/1:8,0:8:6.02:140,6,0	0/0:21,0:21:39.13:0,39,932	0/0:35,0:35:60.18:0,60,1352	0/0:32,0:32:78.25:0,78,1872	0/0:25,0:25:54.17:0,54,1318
chr10	70565496	.	AACAC	A	833.72	PASS	AB=0.917;AC=9;AF=0.167;AN=54;BaseQRankSum=4.400;DP=443;FS=6.128;HRun=0;HaplotypeScore=84.4856;InbreedingCoeff=0.4412;MQ=69.27;MQ0=6;MQRankSum=-0.798;QD=12.08;ReadPosRankSum=2.135;VQSLOD=2.1393;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:27:6.02:0,6,111	0/0:6,0:8:14.52:0,15,239	0/0:26,0:15:6:0,6,94	./.	0/0:18,0:20:32.76:0,33,673	0/0:18,0:18:42.13:0,42,872	0/0:29,0:30:47.90:0,48,1071	0/0:22,0:22:9.03:0,9,175	0/0:10,0:10:15.05:0,15,358	0/0:15,0:15:24.97:0,25,511	0/0:16,0:16:18.06:0,18,430	0/0:8,0:9:9.01:0,9,148	1/1:6,2:9:2.50:158,2,0	0/0:16,0:17:32.58:0,33,658	0/0:12,0:13:26.83:0,27,533	0/0:14,0:14:27.09:0,27,620	0/0:22,0:24:26.13:0,26,506	0/0:9,0:11:18.68:0,19,288	0/0:8,0:8:3.90:0,4,70	0/1:7,0:9:54.73:55,0,278	0/0:17,0:16:20.66:0,21,421	0/0:14,0:15:20.47:0,20,232	1/1:3,7:11:15:191,15,0	1/1:9,9:18:30.10:476,30,0	0/0:18,0:18:33.09:0,33,709	0/0:12,0:12:30.07:0,30,602	0/1:13,1:14:68.10:68,0,419	0/1:8,0:8:31.43:31,0,272
chr10	70565547	.	GGA	G	1778	PASS	AB=0.938;AC=35;AF=0.673;AN=52;BaseQRankSum=-1.323;DP=486;FS=2.458;HRun=0;HaplotypeScore=95.5331;InbreedingCoeff=0.5071;MQ=61.92;MQ0=8;MQRankSum=1.111;QD=5.89;ReadPosRankSum=1.778;VQSLOD=3.1073;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:22:3:0,3,26	0/1:8,0:8:35.63:48,0,36	./.	./.	1/1:18,1:21:11.68:83,12,0	0/1:16,2:18:62.43:148,0,62	1/1:17,6:23:14.87:144,15,0	1/1:14,0:14:6.02:65,6,0	1/1:13,3:17:38.87:361,39,0	1/1:12,0:12:3.01:31,3,0	1/1:8,1:13:11.56:76,12,0	1/1:6,4:10:3.01:33,3,0	0/0:12,0:15:9.01:0,9,94	0/0:18,0:17:6:0,6,69	1/1:11,3:17:17.71:158,18,0	1/1:11,9:22:29.32:237,29,0	1/1:11,11:22:15:150,15,0	0/0:10,0:10:15:0,15,153	1/1:8,1:9:6.01:57,6,0	1/1:11,0:11:3.01:33,3,0	1/1:19,0:19:5.81:65,6,0	1/1:10,5:15:8.86:79,9,0	0/0:19,0:20:24.46:0,24,220	0/0:24,0:24:23.55:0,24,223	1/1:10,0:11:3.01:33,3,0	0/1:14,1:20:7.90:8,0,307	1/1:12,5:17:14.87:144,15,0	0/0:12,0:12:11.98:0,12,115
chr10	70566396	.	TG	T	2742.42	PASS	AB=0.815;AC=49;AF=0.907;AN=54;BaseQRankSum=2.233;DP=397;FS=1.204;HRun=10;HaplotypeScore=159.1311;InbreedingCoeff=0.2369;MQ=62.72;MQ0=0;MQRankSum=-2.796;QD=7.07;ReadPosRankSum=3.771;VQSLOD=0.6459;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:20:8.17:48,8,0	1/1:7,5:12:16.48:102,16,0	0/1:9,1:10:19.06:23,0,19	0/1:7,3:10:14.45:63,0,14	1/1:3,3:7:6.77:38,7,0	1/1:12,4:16:22.49:114,22,0	1/1:16,14:33:55.71:298,56,0	1/1:10,5:15:14.01:107,14,0	1/1:9,9:18:33.94:201,34,0	1/1:4,3:7:10.83:62,11,0	1/1:4,5:9:11.21:84,11,0	1/1:8,6:14:25.02:123,25,0	1/1:8,0:20:17.18:54,17,0	1/1:5,10:16:38.81:226,39,0	1/1:9,14:23:49.40:274,49,0	1/1:8,9:18:36.23:215,36,0	1/1:13,10:23:34.57:209,35,0	0/0:9,0:9:8.46:0,8,71	1/1:3,5:8:13.61:87,14,0	1/1:4,8:12:14.77:96,15,0	1/1:8,5:13:11.15:77,11,0	1/1:8,4:12:6.36:38,6,0	1/1:6,0:16:14.11:38,14,0	0/1:16,0:22:3.37:9,0,3	1/1:4,4:8:9.33:58,9,0	1/1:8,2:10:2.69:20,3,0	1/1:4,10:14:32.17:194,32,0	./.
chr10	70566404	.	G	GT	154.31	PASS	AB=0.881;AC=6;AF=0.111;AN=54;BaseQRankSum=1.477;DP=399;FS=15.677;HRun=0;HaplotypeScore=197.9067;InbreedingCoeff=0.0806;MQ=58.30;MQ0=0;MQRankSum=-0.652;QD=1.86;ReadPosRankSum=-0.277;VQSLOD=1.8611;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,2:23:62.80:77,0,63	0/0:12,0:12:23.87:0,24,134	0/1:6,0:7:27.99:28,0,98	0/0:9,0:9:14.15:0,14,74	0/0:11,0:11:10.34:0,10,47	0/0:13,0:13:18.06:0,18,132	0/0:33,1:34:45.16:0,45,337	0/0:22,0:22:36.62:0,37,216	0/0:18,0:18:38.57:0,39,253	0/0:6,0:6:17.53:0,18,104	0/0:9,0:9:15.64:0,16,88	0/0:12,0:12:35:0,35,204	0/1:17,2:19:18.60:19,0,41	0/0:18,0:18:40.72:0,41,239	0/0:20,0:20:43.16:0,43,294	0/0:19,0:19:39.21:0,39,228	0/0:26,0:26:63.76:0,64,392	0/0:8,0:8:21.28:0,21,168	0/0:9,0:9:23.03:0,23,128	0/0:12,0:14:18.99:0,19,115	0/0:17,0:17:16.18:0,16,84	0/0:10,0:10:8.76:0,9,52	1/1:14,1:15:1.15:65,1,0	0/1:15,4:18:47.47:82,0,47	0/0:9,0:9:20.53:0,21,111	0/0:6,0:6:5.48:0,5,27	0/0:14,0:14:37.35:0,37,209	./.
chr10	70566666	.	AACACACACACACACACACACACAC	A	1323.92	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.627;DP=569;FS=2.822;HRun=0;HaplotypeScore=292.3364;InbreedingCoeff=0.6571;MQ=64.25;MQ0=14;MQRankSum=-2.740;QD=20.06;ReadPosRankSum=0.072;VQSLOD=2.2726;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:30.10:0,30,2139	0/0:9,0:9:9.03:0,9,653	0/0:34,0:18:0:0,0,0	0/0:41,0:22:3.01:0,3,47	0/0:10,0:9:15.05:0,15,1108	0/0:17,0:16:30.10:0,30,2089	0/0:26,0:26:39.10:0,39,2169	0/0:24,0:24:3.01:0,3,98	0/0:14,0:14:1.25:0,1,3	0/0:14,0:13:24.08:0,24,857	0/0:7,0:7:9.03:0,9,595	0/0:17,0:16:24.07:0,24,1270	1/1:10,9:19:14.59:927,15,0	0/0:28,0:28:39.10:0,39,2243	0/0:23,0:22:27.08:0,27,1799	0/0:12,0:13:15.05:0,15,947	0/0:28,0:30:53.62:0,54,3351	0/0:30,0:38:51.14:0,51,3605	0/0:17,0:16:12.66:0,13,763	0/0:12,0:12:21.07:0,21,1591	0/0:37,0:36:48.10:0,48,3112	0/0:8,0:7:3.01:0,3,193	1/1:9,7:17:6.02:192,6,0	1/1:28,2:30:15.04:331,15,0	0/0:15,0:15:18.06:0,18,1409	0/0:20,0:19:42.14:0,42,1693	0/0:14,0:14:16.30:0,16,777	0/0:2,0:2:3.01:0,3,115
chr10	70566720	.	CAG	C	455.23	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=5.418;DP=645;FS=0.000;HRun=0;HaplotypeScore=110.2918;InbreedingCoeff=0.8604;MQ=53.63;MQ0=18;MQRankSum=1.091;QD=9.69;ReadPosRankSum=-2.164;VQSLOD=2.7114;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:28.91:0,29,346	0/0:10,0:10:20.93:0,21,177	0/0:23,0:10:16.23:0,16,195	0/0:25,0:7:17.67:0,18,124	0/1:13,0:13:0.02:0,0,121	0/0:18,0:18:38.96:0,39,459	0/0:30,0:30:59.75:0,60,511	0/0:17,0:17:44.78:0,45,376	0/0:17,0:17:32.94:0,33,271	0/0:17,0:16:41.95:0,42,372	0/0:17,0:16:23.26:0,23,204	0/0:21,0:21:44.04:0,44,361	0/0:29,0:29:64.04:0,64,416	0/0:24,0:23:44.92:0,45,398	0/0:30,0:28:62.99:0,63,620	0/0:24,0:24:55.45:0,55,486	0/0:31,0:29:42.11:0,42,502	0/0:35,0:35:61.85:0,62,586	0/0:15,0:15:37.99:0,38,359	0/0:17,0:17:35.98:0,36,376	0/0:71,0:69:99:0,113,960	0/0:15,0:14:38.93:0,39,320	0/0:15,0:15:17.76:0,18,126	0/0:31,0:31:37.30:0,37,301	0/0:16,0:15:29.94:0,30,268	1/1:8,17:23:20.35:366,20,0	0/0:23,0:22:43.15:0,43,350	1/1:9,0:9:26.89:208,27,0
chr10	70568177	.	C	CT	252.16	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=1.621;DP=324;FS=1.263;HRun=0;HaplotypeScore=46.5139;InbreedingCoeff=0.6203;MQ=67.54;MQ0=14;MQRankSum=-0.896;QD=9.34;ReadPosRankSum=0.917;VQSLOD=3.4801;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:24.04:0,24,259	0/0:5,0:5:12.03:0,12,149	0/0:7,0:5:3.97:0,4,23	0/0:8,0:4:2.89:0,3,17	0/0:17,0:17:36.11:0,36,480	0/0:15,0:14:30.10:0,30,414	0/0:13,0:12:33.11:0,33,458	0/0:11,0:11:21.07:0,21,287	0/0:9,0:9:23.90:0,24,288	0/0:15,0:15:45.04:0,45,595	0/0:14,0:14:30.10:0,30,412	0/0:4,0:4:9.03:0,9,117	./.	0/0:7,0:7:18.06:0,18,236	0/0:6,0:6:12.03:0,12,150	0/0:2,0:1:3.01:0,3,37	0/0:38,0:37:93.08:0,93,1189	0/0:20,0:18:21.21:0,21,170	0/0:22,0:21:59.88:0,60,732	0/0:7,0:7:20.90:0,21,263	0/0:13,0:11:27.09:0,27,375	0/0:8,0:8:21.05:0,21,256	1/1:4,6:6:5.75:95,6,0	1/1:15,2:12:24.02:266,24,0	0/0:10,0:10:23.94:0,24,281	0/0:6,0:5:6.02:0,6,82	0/0:4,0:3:5.99:0,6,62	0/0:9,0:9:23.40:0,23,269
chr10	70568179	.	CGCGCGT	C	517.78	PASS	AB=0.625;AC=5;AF=0.093;AN=54;BaseQRankSum=5.293;DP=331;FS=11.273;HRun=0;HaplotypeScore=72.3137;InbreedingCoeff=0.6303;MQ=67.69;MQ0=12;MQRankSum=-4.767;QD=13.99;ReadPosRankSum=1.151;VQSLOD=0.8204;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:27.06:0,27,436	0/0:6,0:6:13.83:0,14,178	0/0:6,0:5:5.10:0,5,22	0/0:8,0:4:7.10:0,7,49	0/0:16,0:16:45.04:0,45,869	0/0:16,0:15:36.02:0,36,686	0/0:14,0:14:42.03:0,42,827	0/0:14,0:14:35.98:0,36,321	0/0:8,0:8:23.06:0,23,397	0/0:17,0:17:51.12:0,51,911	0/0:14,0:14:42.02:0,42,748	0/0:4,0:4:11.99:0,12,102	./.	0/0:7,0:7:21.02:0,21,416	0/0:6,0:6:15.02:0,15,359	0/0:2,0:1:3.01:0,3,47	0/0:37,0:36:79.74:0,80,2373	0/1:8,12:18:3.90:341,0,4	0/0:23,0:22:58.79:0,59,1156	0/0:7,0:7:20.27:0,20,530	0/0:13,0:12:30.06:0,30,734	0/0:8,0:8:21.06:0,21,487	0/0:11,0:7:8.99:0,9,74	0/0:17,0:12:23.98:0,24,242	0/0:9,0:9:24.01:0,24,393	1/1:7,0:6:11.55:79,12,0	0/0:3,0:2:2.99:0,3,24	1/1:10,0:9:19.41:219,19,0
chr10	70568287	.	G	GAAAAAAAAAAGAA	1445.79	PASS	AB=0.639;AC=5;AF=0.089;AN=56;BaseQRankSum=2.773;DP=465;FS=0.788;HRun=0;HaplotypeScore=160.6130;InbreedingCoeff=0.5618;MQ=70.92;MQ0=6;MQRankSum=-3.360;QD=29.51;ReadPosRankSum=-4.605;VQSLOD=1.0982;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:23:41.71:121,0,42	0/0:7,0:7:21.06:0,21,624	0/0:37,0:16:1.72:0,2,131	0/0:31,0:13:3.63:0,4,149	0/0:18,0:19:45.06:0,45,1108	0/0:18,0:18:51.16:0,51,1641	0/0:21,0:21:54.07:0,54,1665	0/0:18,0:17:23.20:0,23,634	0/0:8,0:8:21.03:0,21,386	0/0:9,0:9:18.04:0,18,496	0/0:20,0:20:44.18:0,44,1628	0/0:13,0:13:33.05:0,33,752	0/0:11,0:11:29.80:0,30,793	0/0:15,0:15:42.09:0,42,997	0/0:18,0:18:50.35:0,50,1573	0/0:9,0:8:20.95:0,21,463	0/0:24,0:24:63.14:0,63,1808	0/0:22,0:22:54.18:0,54,1715	0/0:20,0:19:45.09:0,45,1110	0/0:20,0:20:51.10:0,51,1189	0/0:5,0:5:15.02:0,15,382	0/0:5,0:5:12.02:0,12,353	0/0:11,0:11:30.55:0,31,814	0/0:16,0:17:34.57:0,35,1405	0/0:27,0:27:66.16:0,66,1547	1/1:3,8:14:33.10:1254,33,0	0/0:11,0:11:27.07:0,27,890	1/1:1,4:12:3.01:189,3,0
chr10	70568297	.	GA	G	1194.43	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=4.546;DP=469;FS=1.111;HRun=10;HaplotypeScore=58.2412;InbreedingCoeff=0.8618;MQ=74.75;MQ0=6;MQRankSum=-1.488;QD=11.83;ReadPosRankSum=3.094;VQSLOD=3.0775;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:22:42.65:0,43,229	0/0:7,0:7:18.05:0,18,199	0/0:40,0:18:26.53:0,27,263	0/1:37,0:18:1.93:2,0,125	0/0:19,0:19:57.12:0,57,606	0/0:19,0:19:54.14:0,54,590	0/0:20,1:21:31.10:0,31,569	0/0:22,1:22:38.28:0,38,391	0/0:9,0:9:17.72:0,18,177	0/0:9,0:9:24.06:0,24,265	0/0:19,1:20:28.09:0,28,535	0/0:12,1:13:10.02:0,10,324	1/1:1,11:12:29.99:260,30,0	0/0:15,1:16:16.12:0,16,389	0/0:18,0:18:51.04:0,51,534	0/0:8,0:7:15.04:0,15,166	0/0:22,1:23:43.08:0,43,677	1/1:0,21:21:53.99:469,54,0	0/0:19,0:19:44.95:0,45,472	0/0:18,0:18:42.11:0,42,465	0/0:6,0:6:18.05:0,18,199	0/0:6,0:6:15.04:0,15,166	1/1:2,10:12:26.55:234,27,0	1/1:1,17:18:44.99:389,45,0	0/0:23,0:23:57.15:0,57,624	0/0:10,0:10:28.09:0,28,251	0/0:10,0:10:27.07:0,27,298	0/0:8,0:8:6.01:0,6,63
chr10	70568905	.	G	GAT	1713.31	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.403;DP=897;FS=2.949;HRun=0;HaplotypeScore=106.4157;InbreedingCoeff=0.9999;MQ=82.19;MQ0=0;MQRankSum=-0.571;QD=38.94;ReadPosRankSum=1.064;VQSLOD=5.6374;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:99:0,129,1644	0/0:17,0:17:45.15:0,45,585	0/0:35,0:35:81.13:0,81,989	0/0:30,0:30:78.21:0,78,923	0/0:30,0:30:84.27:0,84,1092	0/0:23,0:23:57.18:0,57,741	0/0:32,0:32:90.20:0,90,1082	0/0:44,0:44:99:0,117,1473	0/0:35,0:35:93.29:0,93,1195	0/0:37,0:37:93.29:0,93,1187	0/0:20,0:20:45.12:0,45,556	0/0:37,0:37:99:0,102,1281	0/0:44,0:44:99:0,117,1427	0/0:42,0:42:99:0,108,1361	0/0:43,0:43:99:0,123,1571	0/0:33,0:33:93.29:0,93,1195	0/0:30,0:30:81.24:0,81,1035	0/0:26,0:26:72.23:0,72,936	0/0:21,0:21:57.18:0,57,730	0/0:33,0:33:87.27:0,87,1117	0/0:34,0:34:93.30:0,93,1209	0/0:30,0:30:72.22:0,72,922	0/0:25,0:25:69.20:0,69,880	0/0:26,0:26:69.14:0,69,844	0/0:32,0:32:90.29:0,90,1170	1/1:2,27:29:42.20:1223,42,0	0/0:44,0:44:99:0,111,1337	1/1:0,15:15:36.12:612,36,0
chr10	70570040	.	ATGTG	A	1615.80	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.651;DP=1029;FS=0.000;HRun=0;HaplotypeScore=183.2974;InbreedingCoeff=0.8674;MQ=55.51;MQ0=23;MQRankSum=1.077;QD=16.66;ReadPosRankSum=1.980;VQSLOD=3.2862;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:67:19.42:0,19,258	0/0:18,0:20:42.50:0,42,864	0/0:51,0:32:3.01:0,3,46	0/0:52,0:26:15.03:0,15,264	0/0:26,0:26:56.92:0,57,1240	0/0:18,0:20:32.58:0,33,659	0/0:39,1:41:35.33:0,35,1638	0/0:33,0:33:53.80:0,54,1000	0/0:30,0:31:69.24:0,69,1616	0/0:45,0:45:60.40:0,60,1646	0/0:19,0:19:42.13:0,42,950	0/0:49,1:51:99:0,102,2244	1/1:13,19:33:48.12:748,48,0	0/0:30,0:36:64.63:0,65,1187	0/0:37,0:43:82.91:0,83,1593	0/0:30,0:30:56.93:0,57,1311	0/0:30,0:41:69.80:0,70,1402	0/0:31,1:35:8.23:0,8,1042	0/0:19,0:18:29.83:0,30,553	0/0:23,0:27:59.41:0,59,1257	0/0:80,0:86:99:0,156,2943	0/0:30,0:32:74.68:0,75,1557	1/1:5,16:23:20.81:340,21,0	1/1:16,23:40:32.54:668,33,0	0/0:29,0:29:59.92:0,60,1295	0/0:28,0:42:71.73:0,72,999	0/0:25,0:32:67.64:0,68,1216	0/0:9,0:14:4.26:0,4,55
chr10	70570471	.	A	ACT	1257.99	PASS	AB=0.605;AC=3;AF=0.054;AN=56;BaseQRankSum=-0.094;DP=714;FS=1.412;HRun=0;HaplotypeScore=113.8969;InbreedingCoeff=0.5346;MQ=85.36;MQ0=1;MQRankSum=-0.958;QD=26.77;ReadPosRankSum=-0.553;VQSLOD=4.5639;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:45:98.95:0,99,1199	0/0:10,0:10:24.07:0,24,297	0/0:44,0:39:49.61:0,50,522	0/0:77,0:52:45.59:0,46,467	0/0:34,0:34:96.27:0,96,1163	0/0:27,0:27:63.17:0,63,756	0/0:19,0:21:41.79:0,42,474	0/0:38,0:37:54.16:0,54,660	0/0:13,0:13:30.09:0,30,372	0/0:25,0:27:59.85:0,60,698	0/0:15,0:16:41.96:0,42,497	0/0:16,0:16:42.13:0,42,520	0/0:15,0:15:42.12:0,42,506	0/0:20,0:20:48.15:0,48,595	0/0:21,0:21:42.10:0,42,495	0/0:17,0:17:48.15:0,48,595	0/0:25,0:25:57.18:0,57,705	0/0:20,0:20:42.10:0,42,505	0/0:17,0:17:42:0,42,475	0/0:24,0:25:42.95:0,43,564	0/0:35,0:35:81.25:0,81,1004	0/0:17,0:17:45.06:0,45,537	0/0:17,0:17:39.12:0,39,483	0/0:27,0:27:46.22:0,46,748	0/0:23,0:23:51.14:0,51,618	0/1:9,17:26:17.23:749,0,17	0/0:19,0:19:39.12:0,39,483	1/1:3,18:21:4.94:602,5,0
chr10	70570660	.	CG	C	7373.38	PASS	AB=0.977;AC=49;AF=0.875;AN=56;BaseQRankSum=8.268;DP=629;FS=1.141;HRun=1;HaplotypeScore=170.3792;InbreedingCoeff=-0.1410;MQ=72.06;MQ0=0;MQRankSum=-6.507;QD=11.72;ReadPosRankSum=10.860;VQSLOD=2.1030;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:8.58:286,9,0	0/1:6,0:6:4.53:73,0,5	0/1:18,1:18:34.66:35,0,215	0/1:21,3:24:99:189,0,188	1/1:20,0:20:23.15:219,23,0	1/1:31,0:31:72.03:422,72,0	1/1:36,0:36:67.12:466,67,0	1/1:22,0:22:42.09:315,42,0	1/1:33,0:33:86.70:515,87,0	1/1:25,0:25:28.07:326,28,0	1/1:9,0:9:25.75:145,26,0	0/1:21,0:21:32.41:195,0,32	1/1:30,0:30:14.16:359,14,0	1/1:30,0:30:53.59:395,54,0	1/1:25,0:25:38.84:346,39,0	1/1:25,0:25:40.19:332,40,0	0/1:18,0:18:21.12:159,0,21	1/1:16,0:15:34.48:190,34,0	1/1:20,0:20:10.83:215,11,0	0/1:22,0:22:58.62:139,0,59	0/1:18,0:18:0.75:89,0,1	1/1:24,0:24:38.11:337,38,0	1/1:14,0:14:31.54:189,32,0	1/1:31,0:31:51.57:392,52,0	1/1:16,0:16:1.74:191,2,0	1/1:22,0:22:42.94:344,43,0	1/1:30,0:29:34.16:382,34,0	1/1:9,0:9:23.02:129,23,0
chr10	70571466	.	AAC	A	1978.74	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.448;DP=657;FS=1.111;HRun=0;HaplotypeScore=79.2300;InbreedingCoeff=0.9977;MQ=90.82;MQ0=0;MQRankSum=-3.858;QD=28.27;ReadPosRankSum=1.456;VQSLOD=4.9107;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,40:42:99:1339,99,0	0/0:8,0:8:21.07:0,21,364	0/0:28,0:28:69.19:0,69,1117	0/0:28,0:28:60.40:0,60,1216	0/0:15,0:15:45.13:0,45,768	0/0:27,0:27:81.28:0,81,1420	0/0:19,0:19:48.13:0,48,778	0/0:27,0:27:72.25:0,72,1265	0/0:17,0:17:51.17:0,51,905	0/0:25,0:25:72.23:0,72,1241	0/0:27,0:27:69.24:0,69,1214	0/0:25,0:25:69.24:0,69,1223	0/0:30,0:30:78.27:0,78,1364	0/0:18,0:18:51.17:0,51,895	0/0:19,0:19:57.19:0,57,991	0/0:21,0:21:63.22:0,63,1102	0/0:41,0:41:99:0,117,2003	1/1:3,25:28:57.15:762,57,0	0/0:20,0:20:57.18:0,57,959	0/0:24,0:24:69.24:0,69,1223	0/0:32,0:32:90.27:0,90,1552	0/0:11,0:11:33.11:0,33,569	0/0:19,0:19:54.18:0,54,934	0/0:25,0:25:69.24:0,69,1205	0/0:16,0:16:42.13:0,42,702	0/0:22,0:22:60.21:0,60,1044	0/0:25,0:25:69.24:0,69,1218	0/0:18,0:18:42.14:0,42,745
chr10	70571578	.	CCTTTCTTCCTTCCTTCCTTTCTTTCTTTCTTT	C	2451.53	PASS	AB=1.000;AC=8;AF=0.148;AN=54;BaseQRankSum=8.226;DP=665;FS=13.552;HRun=0;HaplotypeScore=461.5886;InbreedingCoeff=0.6798;MQ=61.74;MQ0=9;MQRankSum=-5.055;QD=22.29;ReadPosRankSum=2.712;VQSLOD=-0.2837;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:25:62.55:96,0,63	0/0:13,0:12:30.10:0,30,1172	0/0:38,0:19:6.46:0,6,218	0/0:27,0:13:13.89:0,14,86	0/0:29,0:29:75.25:0,75,2565	0/0:29,0:29:67.98:0,68,2476	0/0:25,0:22:57.19:0,57,1694	0/0:33,0:32:54.11:0,54,1427	0/0:19,0:18:48.16:0,48,2052	0/0:25,0:25:69.22:0,69,2823	0/0:18,0:18:36.06:0,36,1295	0/0:24,0:24:55.12:0,55,1858	1/1:19,0:18:48.15:1084,48,0	0/0:17,0:16:42.14:0,42,1456	0/0:13,0:13:30.10:0,30,1048	0/0:24,0:24:45.15:0,45,1634	0/0:36,0:36:40.64:0,41,3661	0/0:29,0:26:66.23:0,66,2009	0/0:20,0:18:39.12:0,39,1321	0/0:24,0:24:51.18:0,51,1733	0/0:11,0:11:27.08:0,27,892	0/0:25,0:25:66.19:0,66,2178	./.	0/1:24,0:21:99:321,0,121	0/0:28,0:27:63.22:0,63,2450	1/1:25,0:25:48.07:764,48,0	0/0:33,0:33:81.23:0,81,2824	1/1:15,0:15:24.05:340,24,0
chr10	70571642	.	CCTTT	C	1321.79	PASS	AB=0.995;AC=20;AF=0.385;AN=52;BaseQRankSum=11.115;DP=665;FS=5.636;HRun=0;HaplotypeScore=144.3410;InbreedingCoeff=-0.3612;MQ=44.75;MQ0=61;MQRankSum=0.915;QD=2.92;ReadPosRankSum=-5.784;VQSLOD=-0.2636;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:10:10.11:32,0,10	0/1:20,0:18:30.55:31,0,319	./.	./.	0/1:30,0:29:54.73:55,0,322	0/0:29,0:27:77.69:0,78,752	0/0:35,0:24:37.25:0,37,348	0/0:29,0:21:25.85:0,26,249	0/1:32,0:28:99:106,0,202	0/1:30,0:28:63.08:63,0,511	0/0:17,0:17:0.27:0,0,187	0/1:39,0:32:99:124,0,308	1/1:15,0:11:8.79:170,9,0	0/0:19,0:18:42.16:0,42,469	0/1:15,0:14:68.89:69,0,183	0/1:25,0:22:34.92:35,0,213	0/1:35,0:34:36.30:36,0,505	0/1:33,1:26:99:103,0,189	0/1:19,0:14:34.04:34,0,178	0/1:34,0:31:99:114,0,334	0/1:19,1:19:44.50:44,0,283	0/0:20,0:18:44.89:0,45,425	1/1:27,0:26:7.09:216,7,0	0/1:24,0:14:65.48:66,0,65	0/0:28,0:24:7.51:0,8,343	0/1:23,0:17:83.72:117,0,84	0/0:22,14:35:10.33:0,10,334	0/1:13,0:10:61.70:63,0,62
chr10	70572429	.	G	GT	450.51	PASS	AB=0.933;AC=3;AF=0.054;AN=56;BaseQRankSum=-6.286;DP=652;FS=2.256;HRun=11;HaplotypeScore=67.7624;InbreedingCoeff=0.6035;MQ=71.71;MQ0=0;MQRankSum=-0.788;QD=8.04;ReadPosRankSum=-0.986;VQSLOD=2.2522;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,2:49:54.60:0,55,770	0/0:10,0:10:29.89:0,30,232	0/0:18,0:16:20.47:0,20,185	0/0:14,0:15:9.16:0,9,41	0/0:29,0:29:70.84:0,71,526	0/0:18,0:18:38.78:0,39,300	0/0:26,0:26:56.70:0,57,436	0/1:26,2:28:16.15:16,0,256	0/0:15,1:16:39.76:0,40,334	0/0:20,1:21:17.33:0,17,313	0/0:27,4:32:12.60:0,13,497	0/0:22,0:22:56.74:0,57,434	0/0:22,0:22:50.76:0,51,392	0/0:17,0:17:35.67:0,36,261	0/0:31,1:32:44.25:0,44,525	0/0:27,0:27:68.71:0,69,534	0/0:38,1:39:71.05:0,71,723	1/1:5,22:28:36.72:539,37,0	0/0:24,0:24:59.73:0,60,460	0/0:22,1:25:34.29:0,34,425	0/0:10,0:10:20.88:0,21,159	0/0:17,1:18:17.34:0,17,314	0/0:22,0:22:56.14:0,56,426	0/0:15,0:18:33.94:0,34,244	0/0:21,0:21:50.77:0,51,394	0/0:24,0:24:47.79:0,48,371	0/0:27,1:29:51.35:0,51,559	0/0:9,0:11:27.96:0,28,195
chr10	70572986	.	G	GTGCTGA	3642.23	PASS	AB=0.961;AC=7;AF=0.125;AN=56;BaseQRankSum=-4.443;DP=756;FS=3.059;HRun=0;HaplotypeScore=566.0365;InbreedingCoeff=0.0973;MQ=38.46;MQ0=4;MQRankSum=-1.665;QD=20.46;ReadPosRankSum=3.246;VQSLOD=1.4964;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:35:23.64:24,0,237	0/0:13,0:13:25.91:0,26,193	0/1:11,0:3:1.16:1,0,39	0/1:17,0:8:10.52:11,0,74	0/0:15,0:15:15.51:0,16,93	0/0:19,0:19:14.42:0,14,153	0/0:32,0:32:44.66:0,45,454	0/0:21,0:20:42.71:0,43,383	0/0:41,0:41:51.89:0,52,775	0/0:31,0:31:80.46:0,80,787	0/0:12,0:11:5.12:0,5,45	0/0:71,0:69:64.34:0,64,1066	0/1:50,7:57:36.44:2597,0,36	0/0:52,0:52:99:0,107,921	0/0:49,0:49:57.26:0,57,705	0/0:40,0:40:52.86:0,53,755	0/0:19,0:19:23.87:0,24,285	0/0:14,0:14:40.22:0,40,394	0/0:13,0:13:27.16:0,27,235	0/0:11,0:11:17.78:0,18,125	0/0:55,0:48:15.17:0,15,195	0/0:13,0:13:12.27:0,12,138	1/1:13,0:13:2.87:261,3,0	0/1:40,4:44:31.77:749,0,32	0/0:23,0:23:30.07:0,30,209	0/0:16,0:16:19.28:0,19,258	0/0:14,0:14:17.35:0,17,234	0/0:4,0:3:3.37:0,3,9
chr10	70577602	.	TCA	T	337.09	PASS	AB=0.928;AC=18;AF=0.333;AN=54;BaseQRankSum=2.390;DP=597;FS=1.899;HRun=0;HaplotypeScore=99.6354;InbreedingCoeff=-0.0341;MQ=67.73;MQ0=16;MQRankSum=0.877;QD=1.31;ReadPosRankSum=1.920;VQSLOD=1.9469;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:39:5.67:0,6,52	0/0:7,0:7:6.02:0,6,88	./.	0/0:37,0:27:0:0,0,0	0/1:9,0:9:26.22:26,0,34	0/1:16,1:17:18.17:18,0,312	0/1:20,1:21:15.36:15,0,163	0/0:27,0:25:3.01:0,3,37	0/1:16,1:17:11.18:11,0,243	0/1:17,1:18:34.89:35,0,176	1/1:8,3:11:3.01:32,3,0	0/1:13,4:17:52.15:53,0,52	1/1:11,3:14:9.02:97,9,0	0/0:22,0:22:10.10:0,10,254	0/0:22,0:22:6.02:0,6,85	0/1:16,2:18:37.45:37,0,280	0/1:32,0:33:37.09:37,0,264	0/0:26,0:28:41.94:0,42,402	0/0:10,0:10:12.03:0,12,159	0/1:4,1:5:26.22:26,0,38	0/0:43,0:41:29.66:0,30,371	0/0:17,0:16:3.01:0,3,44	1/1:12,0:15:5.68:28,6,0	1/1:38,0:43:8.57:62,9,0	0/0:21,0:21:3.90:0,4,184	0/1:17,1:18:14.20:14,0,140	0/0:11,0:13:12.03:0,12,157	0/0:5,0:5:3:0,3,25
chr10	70577791	.	TACACACAC	T	1702.41	PASS	AB=0.614;AC=5;AF=0.089;AN=56;BaseQRankSum=8.141;DP=626;FS=0.000;HRun=0;HaplotypeScore=166.5471;InbreedingCoeff=0.7461;MQ=62.15;MQ0=3;MQRankSum=-5.988;QD=23.32;ReadPosRankSum=-0.882;VQSLOD=2.9805;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,2:36:30.10:547,30,0	0/0:11,0:11:24.08:0,24,928	0/0:17,0:11:21.01:0,21,467	0/0:21,0:16:33.11:0,33,919	0/0:26,0:26:57.20:0,57,2021	0/0:23,0:23:60.19:0,60,2355	0/0:24,0:25:66.21:0,66,2383	0/0:22,0:22:42.14:0,42,1471	0/0:20,0:20:54.17:0,54,1913	0/0:28,0:31:81.27:0,81,3039	0/0:18,0:21:45.15:0,45,1765	0/0:19,0:19:48.14:0,48,1828	0/0:12,0:11:24.08:0,24,903	0/0:19,0:19:42.14:0,42,1721	0/0:7,0:7:18.04:0,18,635	0/0:12,0:12:33.11:0,33,1309	0/0:39,0:39:99:0,105,4112	0/0:42,0:43:87.26:0,87,3036	0/0:16,0:15:39.05:0,39,1314	0/0:27,0:27:69.22:0,69,2566	0/0:41,0:40:99:0,102,3925	0/0:19,0:19:54.19:0,54,1931	0/0:15,0:15:11.26:0,11,1177	0/0:31,0:31:84.23:0,84,2977	0/0:22,0:22:54.19:0,54,2220	0/1:10,17:27:99:1064,0,176	0/0:14,0:14:27.09:0,27,924	1/1:2,8:10:11.93:218,12,0
chr10	70581060	.	TACACAC	T	519.88	PASS	AB=0.955;AC=14;AF=0.280;AN=50;BaseQRankSum=4.276;DP=523;FS=1.497;HRun=0;HaplotypeScore=121.5212;InbreedingCoeff=0.3066;MQ=66.39;MQ0=15;MQRankSum=-1.719;QD=2.80;ReadPosRankSum=0.961;VQSLOD=2.2562;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:2.03:4,2,0	0/0:5,0:5:6.02:0,6,169	./.	./.	0/0:10,0:10:8.39:0,8,104	0/0:12,0:12:4.53:0,5,217	0/0:20,0:20:4.83:0,5,47	0/0:17,0:17:2.04:0,2,6	0/0:21,0:21:41.91:0,42,799	0/1:20,3:23:75.88:190,0,76	0/0:6,5:12:6.02:0,6,80	0/0:13,0:13:14.49:0,14,321	1/1:21,0:26:12.04:168,12,0	0/0:23,0:23:26.85:0,27,669	0/1:25,1:25:35.81:36,0,358	0/0:14,0:17:8.14:0,8,227	1/1:9,1:12:7.79:109,8,0	./.	0/0:24,0:23:18.06:0,18,463	0/0:10,0:10:6.02:0,6,125	0/0:23,0:21:21:0,21,446	0/0:12,0:12:9.03:0,9,193	1/1:12,0:13:2.93:33,3,0	1/1:24,0:26:1.70:40,2,0	0/0:11,0:11:7.84:0,8,182	0/1:22,0:22:0.82:1,0,122	0/0:11,0:11:3:0,3,96	0/1:12,0:11:63.55:78,0,64
chr10	70581125	.	GGGGA	G	930.77	PASS	AB=0.853;AC=11;AF=0.196;AN=56;BaseQRankSum=8.298;DP=564;FS=2.869;HRun=0;HaplotypeScore=116.6252;InbreedingCoeff=0.6272;MQ=56.76;MQ0=32;MQRankSum=-2.591;QD=6.74;ReadPosRankSum=-1.772;VQSLOD=2.5587;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:13:14.45:82,14,0	0/0:10,0:10:24.05:0,24,458	0/0:39,0:17:34.72:0,35,653	0/0:33,0:17:20.95:0,21,733	0/0:13,0:13:33.10:0,33,695	0/0:12,0:11:27.01:0,27,618	0/0:25,0:21:52.71:0,53,1089	0/0:21,0:20:51.16:0,51,1053	0/0:19,0:18:48.16:0,48,1185	0/0:21,0:20:39.94:0,40,1209	0/0:19,0:17:39.13:0,39,1004	0/0:22,0:21:55.38:0,55,1207	1/1:26,0:26:3.97:80,4,0	0/0:22,0:20:50.31:0,50,1204	0/0:28,0:28:73.53:0,74,1706	0/0:22,0:19:45.01:0,45,1003	0/0:20,0:20:57.19:0,57,1383	0/1:22,0:19:9.36:9,0,220	0/0:20,0:16:35.70:0,36,856	0/0:11,0:10:30.10:0,30,700	0/0:36,0:32:77.39:0,77,1752	0/0:17,0:16:40.85:0,41,937	0/1:19,0:18:0.15:14,0,0	1/1:25,0:21:4.62:28,5,0	0/0:10,0:9:21.05:0,21,442	0/1:5,19:23:25.62:773,0,26	0/0:6,0:6:18.06:0,18,418	1/1:5,0:4:6.02:95,6,0
chr10	70581126	.	GGGA	G	976.92	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=9.958;DP=553;FS=5.476;HRun=0;HaplotypeScore=107.6838;InbreedingCoeff=0.7443;MQ=58.17;MQ0=28;MQRankSum=-4.173;QD=8.49;ReadPosRankSum=-1.501;VQSLOD=2.3674;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:13:14.39:81,14,0	0/0:8,0:8:21.05:0,21,365	0/0:41,0:17:37.18:0,37,619	0/0:34,0:19:30.77:0,31,710	0/0:13,0:13:36.06:0,36,599	0/0:12,0:11:22.94:0,23,482	0/0:26,0:22:55.06:0,55,962	0/0:18,0:18:51.11:0,51,851	0/0:17,0:16:48.16:0,48,996	0/0:21,0:20:56.91:0,57,1080	0/0:18,0:17:39.13:0,39,848	0/0:20,0:19:54.61:0,55,1023	1/1:21,5:26:47.82:563,48,0	0/0:21,0:19:54.11:0,54,1040	0/0:29,0:29:78.62:0,79,1484	0/0:21,0:18:43.36:0,43,817	0/0:20,0:20:57.18:0,57,1177	0/0:21,0:19:1.39:0,1,169	0/0:18,0:14:30.95:0,31,720	0/0:11,0:10:29.94:0,30,550	0/0:36,0:32:76.47:0,76,1492	0/0:17,0:16:45.13:0,45,859	1/1:19,0:18:1.46:18,1,0	1/1:22,2:21:9.74:99,10,0	0/0:9,0:8:21.05:0,21,377	0/1:24,0:23:26.44:336,0,26	0/0:6,0:6:18.06:0,18,332	1/1:5,0:4:5.74:38,6,0
chr10	70581128	.	GA	G	820.19	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=11.466;DP=559;FS=3.241;HRun=1;HaplotypeScore=93.1513;InbreedingCoeff=0.7126;MQ=58.40;MQ0=23;MQRankSum=-5.858;QD=6.08;ReadPosRankSum=-0.502;VQSLOD=0.4359;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:13:14.31:81,14,0	0/0:7,0:7:16.34:0,16,204	0/0:43,0:19:41.13:0,41,500	0/0:38,0:21:45.68:0,46,537	0/0:13,0:13:35.99:0,36,393	0/0:12,0:12:24.92:0,25,312	0/0:23,1:21:56.80:0,57,662	0/0:20,0:19:54.08:0,54,611	0/0:17,0:16:48.10:0,48,626	0/0:21,0:20:57.16:0,57,726	0/0:17,0:16:42.12:0,42,554	0/0:20,0:19:53.60:0,54,648	1/1:5,21:27:47.80:484,48,0	0/0:20,0:19:51.13:0,51,656	0/0:29,0:29:56.58:0,57,941	0/0:21,0:18:41.21:0,41,530	0/0:21,0:21:57.64:0,58,753	0/1:21,0:19:7.75:120,0,8	0/0:18,0:14:8.82:0,9,425	0/0:13,1:13:9.97:0,10,377	0/0:34,0:32:78.14:0,78,979	0/0:19,0:18:51.07:0,51,609	1/1:1,16:18:3.63:21,4,0	1/1:5,17:20:11.94:93,12,0	0/0:7,0:7:21.05:0,21,251	0/1:23,0:23:6.57:170,0,7	0/0:8,0:8:23.75:0,24,241	1/1:5,0:4:2.47:13,2,0
chr10	70583293	.	G	GTC	1126.32	PASS	AB=0.563;AC=3;AF=0.054;AN=56;BaseQRankSum=-7.860;DP=367;FS=8.414;HRun=0;HaplotypeScore=46.8423;InbreedingCoeff=0.4948;MQ=73.47;MQ0=1;MQRankSum=-0.374;QD=29.64;ReadPosRankSum=1.717;VQSLOD=4.2296;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:4,14:18:35.17:495,0,35	0/0:6,0:6:15.05:0,15,186	0/0:12,0:11:24.07:0,24,295	0/0:16,0:14:20.67:0,21,223	0/0:7,0:7:18.06:0,18,223	0/0:14,0:14:36.08:0,36,429	0/0:28,0:28:72.20:0,72,865	0/0:17,0:17:36.10:0,36,426	0/0:10,0:10:27.06:0,27,310	0/0:11,0:11:18.05:0,18,223	0/0:3,0:3:9.03:0,9,111	0/0:12,0:12:30.08:0,30,358	0/0:6,0:6:18.06:0,18,223	0/0:8,0:8:18.04:0,18,209	0/0:9,0:9:24.08:0,24,297	0/0:7,0:7:15.05:0,15,186	0/0:28,0:28:60.08:0,60,684	1/1:3,17:20:45.15:737,45,0	0/0:17,0:17:36.07:0,36,413	0/0:3,0:3:6.01:0,6,62	0/0:36,0:36:81.25:0,81,1003	0/0:7,0:7:18.06:0,18,223	0/0:4,0:4:6.01:0,6,62	0/0:24,0:24:63.12:0,63,736	0/0:12,0:12:36.10:0,36,434	0/0:16,0:16:41.62:0,42,510	0/0:13,0:13:36.11:0,36,446	0/0:3,0:3:9.03:0,9,111
chr10	70587592	.	CCTCT	C	3122.57	PASS	AB=0.537;AC=5;AF=0.089;AN=56;BaseQRankSum=10.238;DP=762;FS=9.202;HRun=0;HaplotypeScore=129.7453;InbreedingCoeff=0.7849;MQ=81.37;MQ0=1;MQRankSum=-2.007;QD=35.89;ReadPosRankSum=2.211;VQSLOD=3.7753;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,47:56:99:1944,111,0	0/0:14,0:14:39.13:0,39,986	0/0:33,0:31:48.80:0,49,1471	0/0:38,0:39:74.07:0,74,1801	0/0:24,0:25:69.01:0,69,1595	0/0:28,0:28:81.28:0,81,2060	0/0:24,0:24:72.23:0,72,1767	0/0:40,0:41:96.10:0,96,2213	0/0:22,0:22:60.21:0,60,1461	0/0:32,0:32:87.30:0,87,2161	0/0:19,0:19:50.95:0,51,1259	0/0:19,0:19:51.16:0,51,1251	0/0:23,0:23:60.21:0,60,1540	0/0:24,0:24:66.23:0,66,1650	0/0:30,0:30:78.25:0,78,1845	0/0:23,0:24:72.03:0,72,1771	0/0:31,0:31:87.30:0,87,2182	0/0:35,0:35:96.33:0,96,2394	0/0:18,0:18:48.16:0,48,1143	0/0:25,0:25:72.23:0,72,1783	0/0:42,0:42:99:0,114,2867	0/0:18,0:18:45.15:0,45,1127	0/0:18,0:18:42.14:0,42,1038	0/0:42,0:42:99:0,117,2988	0/0:24,0:24:69.22:0,69,1691	0/1:3,19:22:16.58:884,0,17	0/0:23,0:24:63:0,63,1505	1/1:0,9:9:24.08:424,24,0
chr10	70587968	.	AG	A	1544.42	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.492;DP=793;FS=1.881;HRun=4;HaplotypeScore=72.8982;InbreedingCoeff=0.9913;MQ=72.85;MQ0=0;MQRankSum=-0.450;QD=30.28;ReadPosRankSum=1.783;VQSLOD=4.0307;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,51:51:99:1639,138,0	0/0:7,0:7:18.01:0,18,228	0/0:13,0:13:36.07:0,36,449	0/0:16,0:15:30.09:0,30,394	0/0:23,0:23:66.22:0,66,923	0/0:31,0:31:84.28:0,84,1175	0/0:42,0:42:99:0,117,1586	0/0:42,0:42:99:0,114,1578	0/0:45,0:45:99:0,126,1748	0/0:22,0:22:66.21:0,66,910	0/0:16,0:16:45.15:0,45,630	0/0:28,0:28:84.28:0,84,1174	0/0:31,0:31:87.26:0,87,1164	0/0:25,0:25:75.25:0,75,1048	0/0:32,0:32:96.30:0,96,1311	0/0:19,0:19:57.17:0,57,777	0/0:52,0:52:99:0,150,2042	0/0:37,0:37:99:0,108,1446	0/0:17,0:17:48.15:0,48,642	0/0:19,0:19:57.08:0,57,738	0/0:66,0:66:99:0,190,2609	0/0:21,0:21:57.03:0,57,715	0/0:17,0:17:48.15:0,48,653	0/0:33,0:33:90.30:0,90,1257	0/0:20,0:20:60.19:0,60,824	0/0:27,0:27:78.25:0,78,1072	0/0:25,0:25:69.22:0,69,941	0/0:16,0:16:48.16:0,48,672
chr10	70589381	.	CGTGTGTGTGTGTGTGTGTGT	C	1452.10	PASS	AB=0.894;AC=6;AF=0.115;AN=52;BaseQRankSum=5.569;DP=546;FS=9.298;HRun=0;HaplotypeScore=254.9130;InbreedingCoeff=0.2058;MQ=54.26;MQ0=17;MQRankSum=-4.518;QD=15.78;ReadPosRankSum=0.744;VQSLOD=0.9118;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:9.03:0,9,312	0/0:11,0:12:9.03:0,9,777	./.	./.	0/0:16,0:14:12.04:0,12,737	0/0:20,0:19:27.08:0,27,1887	0/0:34,0:32:32.79:0,33,1951	0/0:29,0:28:26.02:0,26,546	0/0:18,0:18:11.97:0,12,594	0/0:23,0:23:36.11:0,36,1827	0/0:11,0:11:12.51:0,13,727	0/0:15,0:14:12.04:0,12,769	0/1:18,1:20:14.12:252,0,14	0/0:15,0:14:18.04:0,18,1205	0/0:24,0:25:45.03:0,45,3109	0/0:9,0:11:12.04:0,12,815	0/0:27,0:26:39.08:0,39,2425	0/0:19,0:21:24.90:0,25,558	0/0:13,0:13:15.52:0,16,626	0/0:18,0:18:21.07:0,21,1265	0/0:27,0:27:3.01:0,3,153	0/0:14,0:15:27.09:0,27,1898	0/1:5,0:7:14.94:174,0,15	0/1:29,0:29:3.07:3,0,120	0/0:17,0:16:24.08:0,24,1401	0/1:21,3:23:99:506,0,178	0/0:21,0:20:36.12:0,36,2525	1/1:10,2:11:12.04:635,12,0
chr10	70589771	.	AGT	A	341.35	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.503;DP=877;FS=4.290;HRun=0;HaplotypeScore=178.2452;InbreedingCoeff=0.9387;MQ=69.08;MQ0=12;MQRankSum=-1.573;QD=22.76;ReadPosRankSum=-0.015;VQSLOD=3.8728;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,120,2045	0/0:17,0:17:42.07:0,42,723	0/0:37,0:16:20.46:0,20,277	0/0:39,0:17:23.74:0,24,338	0/0:27,0:27:60.04:0,60,1034	0/0:20,0:20:57.17:0,57,947	0/0:47,0:47:99:0,120,2056	0/0:24,0:24:72.25:0,72,1232	0/0:28,0:28:81.26:0,81,1375	0/0:39,0:39:99:0,105,1817	0/0:17,0:17:35.93:0,36,610	0/0:39,0:39:99:0,111,1890	0/0:31,0:30:81.28:0,81,1383	0/0:42,0:42:99:0,117,2009	0/0:40,0:40:99:0,111,1903	0/0:34,0:34:96.33:0,96,1662	0/0:28,0:28:84.27:0,84,1423	1/1:6,9:15:33.11:436,33,0	0/0:22,0:22:51.17:0,51,869	0/0:18,0:18:51.17:0,51,867	0/0:53,0:53:99:0,141,2403	0/0:38,0:38:99:0,99,1674	0/0:25,0:23:54.07:0,54,897	0/0:57,0:55:99:0,114,1934	0/0:18,0:18:35.88:0,36,623	0/0:43,0:43:99:0,123,2068	0/0:30,0:30:81.28:0,81,1392	0/0:4,0:4:9.03:0,9,152
chr10	70589791	.	T	TAC	4286.61	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.541;DP=932;FS=8.872;HRun=0;HaplotypeScore=173.4614;InbreedingCoeff=0.9341;MQ=55.23;MQ0=38;MQRankSum=-0.325;QD=18.32;ReadPosRankSum=2.837;VQSLOD=4.7847;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:50,0:53:34.97:485,35,0	0/0:18,0:16:30.08:0,30,363	0/0:37,0:4:2.99:0,3,24	0/0:38,0:10:4.60:0,5,41	0/0:28,0:28:54.14:0,54,656	0/0:17,0:17:36.10:0,36,444	0/0:51,0:51:99:0,121,1511	0/0:35,0:30:57.15:0,57,681	0/0:31,0:31:82.80:0,83,1010	0/0:49,0:42:99:0,99,1209	0/0:21,0:21:33.09:0,33,405	0/0:39,0:37:96.29:0,96,1207	1/1:20,12:31:48.16:773,48,0	0/0:41,0:40:99:0,114,1448	0/0:38,0:37:99:0,99,1232	0/0:32,0:32:81.23:0,81,1002	0/0:30,0:30:72.16:0,72,866	1/1:12,0:16:16.39:161,16,0	0/0:18,0:15:32.84:0,33,393	0/0:21,0:20:33.10:0,33,413	0/0:62,0:59:99:0,141,1759	0/0:40,0:38:66.20:0,66,827	1/1:12,13:20:12.04:200,12,0	1/1:24,30:52:53.99:872,54,0	0/0:17,0:18:26.92:0,27,318	1/1:16,29:41:99:1585,99,0	0/0:34,0:34:96.29:0,96,1204	1/1:3,3:6:15.02:212,15,0
chr10	70589823	.	T	TAC	2252.34	PASS	AB=0.825;AC=11;AF=0.212;AN=52;BaseQRankSum=10.826;DP=917;FS=6.657;HRun=0;HaplotypeScore=172.5241;InbreedingCoeff=0.8153;MQ=49.37;MQ0=48;MQRankSum=-2.571;QD=11.49;ReadPosRankSum=-1.721;VQSLOD=2.5133;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:40,11:51:99:372,0,132	0/0:22,0:19:32.90:0,33,425	./.	./.	0/0:30,0:30:60.18:0,60,762	0/0:17,0:17:39.13:0,39,507	0/0:46,0:46:99:0,105,1347	0/0:43,0:29:72.18:0,72,906	0/0:32,0:32:83.89:0,84,1059	0/0:42,0:29:78.07:0,78,974	0/0:21,0:20:27.07:0,27,337	0/0:38,0:36:87.25:0,87,1113	1/1:30,0:30:8.51:150,9,0	0/0:42,0:41:99:0,114,1389	0/0:32,0:30:72.20:0,72,904	0/0:26,0:25:69.20:0,69,864	0/0:32,0:32:78.25:0,78,1008	0/0:21,0:18:11.95:0,12,105	0/0:27,0:20:48.09:0,48,565	0/0:23,0:21:42.14:0,42,543	0/0:99,0:92:99:0,216,2759	0/0:42,0:39:78.21:0,78,965	1/1:17,0:14:5.98:46,6,0	1/1:45,0:44:7.98:54,8,0	0/0:25,0:25:39.11:0,39,492	1/1:24,23:41:99:1557,105,0	0/0:33,0:33:87.21:0,87,1067	1/1:1,4:5:15.05:234,15,0
chr10	70589827	.	CACACAT	C	919.02	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=9.937;DP=944;FS=5.814;HRun=0;HaplotypeScore=233.8406;InbreedingCoeff=0.5642;MQ=49.03;MQ0=51;MQRankSum=-3.053;QD=4.60;ReadPosRankSum=-3.973;VQSLOD=1.6228;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:52,0:51:20.85:21,0,299	0/0:22,0:19:33.07:0,33,900	0/0:20,0:6:11.99:0,12,153	0/0:21,0:2:6.02:0,6,72	0/0:30,0:30:63.20:0,63,1702	0/0:17,0:17:45.15:0,45,1330	0/0:48,0:48:99:0,111,3171	0/0:44,0:30:81.22:0,81,2023	0/0:32,0:32:83.58:0,84,2390	0/0:42,0:28:81.27:0,81,2455	0/0:21,0:20:30.10:0,30,907	0/0:38,0:36:90.72:0,91,2529	1/1:6,24:30:36.32:619,36,0	0/0:45,0:44:99:0,123,3433	0/0:30,0:28:78.23:0,78,2099	0/0:26,0:25:72.19:0,72,1722	0/0:29,0:29:81.26:0,81,2321	0/0:24,0:20:26.90:0,27,301	0/0:31,0:25:64.47:0,64,1092	0/0:25,0:23:45.15:0,45,1375	0/0:100,0:92:99:0,238,7066	0/0:42,0:39:84.08:0,84,2226	1/1:7,10:14:5.91:131,6,0	1/1:26,20:45:14.21:169,14,0	0/0:24,0:24:39.13:0,39,1192	0/1:50,0:44:99:122,0,541	0/0:33,0:33:96.29:0,96,2673	0/1:5,0:5:4.01:4,0,134
chr10	70589829	.	CACAT	C	318.31	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=8.424;DP=942;FS=4.573;HRun=0;HaplotypeScore=206.2302;InbreedingCoeff=0.5736;MQ=49.10;MQ0=48;MQRankSum=-2.825;QD=1.71;ReadPosRankSum=-3.674;VQSLOD=1.1975;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:50,0:49:5.60:6,0,325	0/0:22,0:19:33.07:0,33,765	0/1:21,0:7:0.52:1,0,118	0/0:22,0:3:8.97:0,9,74	0/0:31,0:31:66.16:0,66,1459	0/0:16,0:16:45.15:0,45,1125	0/0:46,0:46:99:0,114,2733	0/0:43,0:30:84.17:0,84,1840	0/0:31,0:31:77.58:0,78,1993	0/0:42,0:29:84.26:0,84,2025	0/0:22,0:21:33.10:0,33,782	0/0:40,0:38:77.14:0,77,2072	1/1:29,0:30:31.55:248,32,0	0/0:46,0:45:99:0,126,2883	0/0:32,0:30:83.87:0,84,1778	0/0:25,0:24:72.16:0,72,1489	0/0:31,0:31:87.22:0,87,2023	0/1:23,0:19:39.58:40,0,218	0/0:31,0:25:44.55:0,45,1003	0/0:24,0:22:44.97:0,45,1071	0/0:101,0:94:99:0,247,5936	0/0:41,0:38:84.04:0,84,1816	1/1:16,1:14:5.85:57,6,0	1/1:41,4:44:14.06:108,14,0	0/0:24,0:24:39.12:0,39,980	0/0:46,1:42:2.41:0,2,729	0/0:33,0:33:95.93:0,96,2182	0/0:5,0:5:11.04:0,11,136
chr10	70589833	.	TAC	T	206.52	PASS	AB=0.872;AC=5;AF=0.089;AN=56;BaseQRankSum=6.354;DP=946;FS=0.000;HRun=0;HaplotypeScore=175.7220;InbreedingCoeff=0.2329;MQ=48.51;MQ0=48;MQRankSum=-1.413;QD=1.64;ReadPosRankSum=-0.621;VQSLOD=2.0954;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,26:47:99:242,0,204	0/0:21,0:19:27.08:0,27,461	0/1:30,1:11:13.33:13,0,228	0/0:31,0:4:9.03:0,9,130	0/0:31,0:31:63.22:0,63,1060	0/0:16,0:16:45.15:0,45,768	0/0:44,0:44:99:0,105,1772	0/0:44,0:32:81.24:0,81,1298	0/0:31,0:31:74.29:0,74,1227	0/0:40,0:27:81.23:0,81,1365	0/0:20,0:19:33.11:0,33,561	0/0:37,0:35:78.24:0,78,1303	0/1:30,0:30:38.58:40,0,39	0/0:43,0:42:99:0,111,1838	0/0:30,0:28:72.23:0,72,1184	0/0:26,0:26:57.19:0,57,951	0/0:33,0:33:80.72:0,81,1333	0/0:18,3:18:6.10:0,6,193	0/0:29,0:23:50.63:0,51,722	0/0:23,0:21:42.14:0,42,713	0/0:104,0:97:99:0,259,4329	0/0:39,0:36:72.24:0,72,1191	1/1:17,0:14:5.48:24,5,0	0/0:47,0:45:1.81:0,2,7	0/0:24,0:24:36.12:0,36,623	0/0:48,0:43:99:0,112,1277	0/0:32,0:32:90.25:0,90,1453	0/0:5,0:5:12.03:0,12,168
chr10	70589870	.	GCACA	G	1363.18	PASS	AB=0.882;AC=9;AF=0.161;AN=56;BaseQRankSum=6.135;DP=953;FS=0.000;HRun=0;HaplotypeScore=169.6297;InbreedingCoeff=0.8056;MQ=48.52;MQ0=34;MQRankSum=-1.910;QD=11.27;ReadPosRankSum=0.628;VQSLOD=3.2487;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:42:44.68:0,45,919	0/0:12,0:12:26.90:0,27,550	0/0:94,0:29:35.76:0,36,500	0/0:103,0:31:62.62:0,63,884	0/0:22,0:24:53.92:0,54,1261	0/0:21,0:22:50.95:0,51,1101	0/0:39,0:44:75.89:0,76,1615	0/0:20,0:19:32.84:0,33,661	0/0:32,0:34:72.23:0,72,1681	0/0:22,0:22:50.90:0,51,1093	0/1:13,1:15:14.27:14,0,589	0/0:32,0:36:95.27:0,95,2102	1/1:5,22:30:42.28:628,42,0	0/0:34,0:37:83.76:0,84,1930	0/0:23,0:24:56.91:0,57,1293	0/0:21,0:22:59.94:0,60,1381	0/0:28,0:33:77.18:0,77,1561	1/1:5,14:18:32.55:526,33,0	0/0:19,0:19:39.06:0,39,807	0/0:18,0:20:29.54:0,30,505	0/0:90,1:93:99:0,151,3850	0/0:22,0:24:47.39:0,47,931	1/1:3,7:10:2.96:50,3,0	1/1:15,29:44:17.85:300,18,0	0/0:24,0:26:45.13:0,45,1001	0/0:7,0:35:94.77:0,95,1458	0/0:29,0:29:60.21:0,60,1478	0/0:3,0:6:9.03:0,9,158
chr10	70590057	.	C	CA	1198.71	PASS	AB=0.958;AC=10;AF=0.179;AN=56;BaseQRankSum=-1.491;DP=593;FS=0.493;HRun=11;HaplotypeScore=65.9953;InbreedingCoeff=0.7674;MQ=71.63;MQ0=0;MQRankSum=-1.613;QD=11.10;ReadPosRankSum=-0.922;VQSLOD=2.8773;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,1:20:23.33:0,23,360	0/1:10,1:11:0.57:1,0,178	0/1:11,0:12:16.70:26,0,17	0/0:13,0:14:6.40:0,6,59	0/0:28,0:30:75.73:0,76,563	0/0:25,0:25:53.74:0,54,418	0/0:16,0:17:40.85:0,41,305	0/0:19,2:22:15.43:0,15,283	0/0:19,0:19:44.78:0,45,348	0/0:24,2:26:32.29:0,32,434	0/0:29,0:30:52.90:0,53,553	0/0:22,0:23:46.82:0,47,353	1/1:5,14:19:18.85:372,19,0	0/0:16,0:16:38.82:0,39,302	0/0:21,0:21:53.74:0,54,415	0/0:16,1:17:7.78:0,8,233	0/0:22,0:21:53.75:0,54,415	1/1:6,1:20:31.17:157,31,0	0/0:17,0:17:32.84:0,33,255	0/0:20,0:21:49.81:0,50,375	0/0:14,0:14:29.87:0,30,232	0/0:33,0:34:82.20:0,82,616	1/1:6,18:24:36.07:365,36,0	1/1:1,19:21:44.92:441,45,0	0/0:24,0:26:66.79:0,67,495	0/0:30,4:34:53.06:0,53,584	0/0:24,1:25:37.30:0,37,463	0/0:9,0:9:19.93:0,20,145
chr10	70591685	.	C	CTACT	4946.52	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.261;DP=808;FS=2.911;HRun=0;HaplotypeScore=128.2559;InbreedingCoeff=0.9999;MQ=87.54;MQ0=1;MQRankSum=-2.754;QD=53.77;ReadPosRankSum=1.697;VQSLOD=6.3164;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,138,2489	0/0:17,0:17:45.15:0,45,824	0/0:33,0:32:84.03:0,84,1378	0/0:31,0:31:75.70:0,76,1396	0/0:16,0:16:45.15:0,45,839	0/0:22,0:22:66.23:0,66,1230	0/0:25,0:25:66.23:0,66,1212	0/0:38,0:38:99:0,99,1756	0/0:31,0:31:93.32:0,93,1735	0/0:30,0:30:84.28:0,84,1538	0/0:15,0:15:36.11:0,36,641	0/0:27,0:27:78.27:0,78,1456	1/1:4,28:31:68.80:1828,69,0	0/0:26,0:26:69.24:0,69,1288	0/0:34,0:34:99:0,102,1864	0/0:41,0:41:99:0,120,2098	0/0:35,0:35:99:0,99,1830	0/0:28,0:28:78.23:0,78,1392	0/0:21,0:21:57.19:0,57,1021	0/0:24,0:24:72.23:0,72,1278	0/0:55,0:55:99:0,156,2833	0/0:21,0:21:60.17:0,60,1048	1/1:5,14:20:39.13:1039,39,0	1/1:4,34:40:78.27:2080,78,0	0/0:22,0:22:66.23:0,66,1232	0/0:33,0:33:84.28:0,84,1521	0/0:27,0:27:75.26:0,75,1399	0/0:14,0:14:42.14:0,42,783
chr10	70592431	.	TGCAA	T	1080.35	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.671;DP=662;FS=2.988;HRun=0;HaplotypeScore=104.7622;InbreedingCoeff=0.9971;MQ=87.34;MQ0=0;MQRankSum=-2.463;QD=40.01;ReadPosRankSum=-0.168;VQSLOD=3.9084;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:93.32:0,93,2470	0/0:13,0:13:39.06:0,39,907	0/0:22,0:22:66.23:0,66,1763	0/0:26,0:26:78.27:0,78,2125	0/0:16,0:15:45.15:0,45,1242	0/0:18,0:18:54.19:0,54,1508	0/0:36,0:36:99:0,105,2810	0/0:38,0:38:99:0,108,2988	0/0:25,0:25:75.26:0,75,2089	0/0:20,0:20:60.20:0,60,1598	0/0:12,0:12:36.08:0,36,943	0/0:22,0:22:66.23:0,66,1847	0/0:32,0:32:96.31:0,96,2560	0/0:33,0:33:96.32:0,96,2573	0/0:24,0:24:69.22:0,69,1870	0/0:25,0:25:75.26:0,75,2060	0/0:37,0:37:99:0,111,3056	0/0:23,0:23:66.23:0,66,1847	0/0:9,0:9:27.09:0,27,756	0/0:14,0:14:42.14:0,42,1175	0/0:50,0:50:99:0,150,4080	0/0:20,0:20:60.21:0,60,1644	0/0:13,0:13:39.13:0,39,1091	0/0:41,0:41:99:0,120,3341	0/0:12,0:12:36.12:0,36,1006	1/1:0,14:14:42.13:782,42,0	0/0:19,0:18:57.18:0,57,1533	1/1:0,13:13:21.07:419,21,0
chr10	70596778	.	GGTGTGTGTGTGTGTGT	G	987.93	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.819;DP=539;FS=1.094;HRun=0;HaplotypeScore=205.3494;InbreedingCoeff=0.7379;MQ=63.85;MQ0=12;MQRankSum=-1.593;QD=19.37;ReadPosRankSum=0.671;VQSLOD=2.8044;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:18.06:0,18,805	0/0:5,0:5:6.02:0,6,369	0/0:17,0:16:2.98:0,3,21	0/0:19,0:16:17.85:0,18,571	0/0:16,0:16:14.23:0,14,466	0/0:16,0:15:6.49:0,6,300	0/0:39,0:38:35.81:0,36,1692	0/0:22,0:18:21:0,21,520	0/0:19,0:19:27.09:0,27,1689	0/0:15,0:15:17.99:0,18,765	0/0:6,0:6:6.02:0,6,417	0/0:18,0:18:29.08:0,29,1658	1/1:11,5:18:24.08:898,24,0	0/0:21,0:20:23.93:0,24,1424	0/0:13,0:11:12.04:0,12,710	0/0:20,0:20:18.06:0,18,1045	0/0:26,0:26:39.59:0,40,2154	0/0:23,0:23:24.08:0,24,1214	0/0:21,0:19:12.04:0,12,637	0/0:16,0:15:18.06:0,18,1041	0/0:61,0:59:57.63:0,58,2431	0/0:17,0:17:26.74:0,27,1080	1/1:10,0:11:9.02:109,9,0	1/1:20,1:21:8.94:110,9,0	0/0:16,0:16:15.05:0,15,737	0/0:18,0:18:36.10:0,36,1570	0/0:9,0:9:18.06:0,18,874	0/0:8,0:7:6.02:0,6,268
chr10	70596867	.	AAG	A	639.24	PASS	AB=0.971;AC=10;AF=0.192;AN=52;BaseQRankSum=5.357;DP=502;FS=0.000;HRun=0;HaplotypeScore=93.3495;InbreedingCoeff=0.4773;MQ=48.64;MQ0=19;MQRankSum=0.173;QD=4.60;ReadPosRankSum=1.267;VQSLOD=2.5785;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:9.03:0,9,131	0/0:10,0:9:27.08:0,27,396	./.	./.	0/0:22,0:20:30.10:0,30,472	0/0:17,0:17:37.46:0,37,600	0/0:22,0:21:39.13:0,39,617	0/0:25,0:21:45.15:0,45,650	0/0:17,0:15:36.10:0,36,551	0/0:25,0:24:57.12:0,57,824	0/0:9,0:8:18.06:0,18,272	0/1:15,1:16:9.87:10,0,321	1/1:15,7:20:30.46:471,30,0	0/0:18,0:18:38.98:0,39,599	0/0:22,0:22:48.16:0,48,752	0/0:18,0:18:45.15:0,45,701	0/0:19,0:17:35.78:0,36,502	0/1:8,0:7:5.68:6,0,34	0/0:14,0:13:18.85:0,19,275	0/0:21,0:20:32.93:0,33,424	0/0:31,1:28:17.62:0,18,710	0/1:16,1:17:0.80:1,0,363	1/1:5,13:17:5.97:74,6,0	1/1:11,17:25:5.89:74,6,0	0/0:6,0:6:9.03:0,9,137	0/1:29,0:29:99:143,0,117	0/0:14,0:12:41.99:0,42,593	0/0:14,0:13:20.09:0,20,132
chr10	70596881	.	G	GAC	1780.06	PASS	AB=0.869;AC=8;AF=0.143;AN=56;BaseQRankSum=5.443;DP=532;FS=2.732;HRun=0;HaplotypeScore=84.0692;InbreedingCoeff=0.3971;MQ=52.88;MQ0=13;MQRankSum=0.231;QD=13.80;ReadPosRankSum=0.110;VQSLOD=2.9439;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:34:53.95:54,0,91	0/0:10,0:9:27.08:0,27,386	0/0:7,0:4:11.99:0,12,113	0/0:19,0:10:22.48:0,22,192	0/0:20,0:20:41.26:0,41,528	0/0:16,0:16:45.12:0,45,636	0/0:20,0:20:48.09:0,48,656	0/0:26,0:22:56.94:0,57,744	0/0:17,0:16:42.08:0,42,572	0/0:25,0:24:66.13:0,66,886	0/0:9,0:9:21.06:0,21,291	0/1:14,0:14:3.98:4,0,345	0/1:23,0:21:35.75:36,0,52	0/0:17,0:17:42.01:0,42,596	0/0:23,0:23:60.04:0,60,819	0/0:19,0:19:54.14:0,54,743	0/0:20,0:19:41.76:0,42,535	1/1:8,1:8:17.99:262,18,0	0/0:18,0:17:33.86:0,34,403	0/0:21,0:20:44.91:0,45,515	0/0:30,0:28:73.84:0,74,884	0/0:18,0:18:36.33:0,36,444	0/0:16,0:16:5.24:0,5,29	0/0:29,0:28:7.35:0,7,52	0/0:6,0:6:15.02:0,15,184	1/1:1,26:29:73.30:1243,73,0	0/0:16,0:14:47.97:0,48,624	0/1:1,15:17:24.61:325,0,25
chr10	70596883	.	GAC	G	105.10	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=8.012;DP=529;FS=5.681;HRun=0;HaplotypeScore=83.9343;InbreedingCoeff=0.1890;MQ=53.58;MQ0=13;MQRankSum=0.263;QD=1.64;ReadPosRankSum=0.914;VQSLOD=0.7671;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:20.75:0,21,158	0/0:10,0:9:27.09:0,27,437	0/0:10,0:5:11.97:0,12,103	0/0:20,0:11:2.74:0,3,187	0/0:16,4:20:23.50:0,23,637	0/0:17,0:17:34.44:0,34,693	0/0:21,0:21:51.02:0,51,795	0/0:27,0:23:63.83:0,64,754	0/0:18,0:17:45.11:0,45,745	0/0:25,0:24:66.10:0,66,902	0/0:8,0:8:24.04:0,24,308	0/0:15,0:15:17.11:0,17,474	1/1:21,0:19:0.30:167,0,0	0/0:15,0:15:45.12:0,45,748	0/0:22,0:22:60.14:0,60,941	0/0:19,0:19:54.10:0,54,836	0/0:18,0:18:34.45:0,34,631	0/0:8,0:7:20.96:0,21,202	0/0:19,0:18:35.92:0,36,395	0/0:21,0:20:38.98:0,39,522	0/0:29,0:27:49.47:0,49,990	0/0:17,0:17:28.44:0,28,518	0/1:15,0:15:15.42:17,0,15	0/1:28,0:28:19.28:19,0,37	0/0:6,0:6:14.98:0,15,173	0/0:30,0:30:3.27:0,3,621	0/0:18,0:16:50.45:0,50,722	0/0:16,0:16:21.07:0,21,276
chr10	70597569	.	G	GT	797.91	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.252;DP=410;FS=1.931;HRun=1;HaplotypeScore=57.5199;InbreedingCoeff=0.8670;MQ=84.68;MQ0=0;MQRankSum=-2.511;QD=16.28;ReadPosRankSum=0.388;VQSLOD=3.7058;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:63.02:425,63,0	0/0:4,0:4:9.01:0,9,100	0/0:19,0:18:28.11:0,28,289	0/0:15,0:15:21.25:0,21,310	0/0:12,0:12:30.02:0,30,307	0/0:7,0:7:21.05:0,21,245	0/0:21,0:21:55.33:0,55,690	0/0:15,0:15:39.04:0,39,395	0/0:12,0:12:33.09:0,33,409	0/0:12,0:12:29.82:0,30,337	0/0:7,0:7:17.77:0,18,176	0/0:20,0:20:57.12:0,57,679	0/0:9,0:11:13.26:0,13,101	0/0:16,0:16:48.15:0,48,612	0/0:20,0:20:49.01:0,49,592	0/0:15,0:15:42.12:0,42,525	0/0:22,0:22:57.13:0,57,679	0/0:14,0:14:37.64:0,38,241	0/0:18,0:18:36.04:0,36,407	0/0:11,0:11:30.07:0,30,354	0/0:33,0:33:93.21:0,93,1116	0/0:7,0:7:18.03:0,18,199	0/0:5,0:5:8.65:0,9,50	0/0:13,0:13:0.73:0,1,104	0/0:15,0:15:42.10:0,42,499	1/1:5,8:13:29.34:299,29,0	0/0:17,0:17:48.10:0,48,559	1/1:2,7:9:23.91:215,24,0
chr10	70597570	.	T	TCC	857.34	PASS	AB=0.933;AC=11;AF=0.196;AN=56;BaseQRankSum=4.711;DP=404;FS=2.981;HRun=10;HaplotypeScore=64.6530;InbreedingCoeff=0.7869;MQ=84.92;MQ0=0;MQRankSum=-1.028;QD=12.43;ReadPosRankSum=-0.226;VQSLOD=1.3224;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:46.56:0,47,208	0/0:3,0:4:8.76:0,9,73	0/0:17,0:17:17.58:0,18,128	0/0:17,0:16:22.68:0,23,213	0/0:9,0:10:17.72:0,18,155	0/0:7,0:7:17.99:0,18,162	0/0:19,0:21:41.51:0,42,453	0/0:14,0:14:11.97:0,12,122	0/0:12,0:12:30.03:0,30,299	0/0:11,0:11:21.03:0,21,213	0/0:7,0:7:8.97:0,9,90	0/0:18,0:19:47.82:0,48,469	1/1:11,0:11:12:121,12,0	0/0:16,0:16:48.09:0,48,480	0/0:19,0:19:41.80:0,42,413	0/0:14,0:14:39.05:0,39,388	0/0:22,0:22:45.07:0,45,458	1/1:16,0:16:18.42:291,18,0	0/0:15,0:15:5.41:0,5,213	0/0:11,0:11:26.99:0,27,257	0/0:33,0:33:77.93:0,78,764	0/0:7,0:7:14.99:0,15,144	1/1:3,2:5:3.01:45,3,0	1/1:4,7:13:14.02:152,14,0	0/0:15,0:15:35.95:0,36,335	0/1:13,0:14:7.99:217,0,8	0/0:15,0:16:38.78:0,39,372	1/1:10,0:10:23.94:198,24,0
chr10	70597577	.	C	CA	360.92	PASS	AB=0.640;AC=3;AF=0.054;AN=56;BaseQRankSum=6.857;DP=399;FS=5.035;HRun=0;HaplotypeScore=57.6211;InbreedingCoeff=0.5210;MQ=84.31;MQ0=0;MQRankSum=-2.069;QD=12.89;ReadPosRankSum=1.363;VQSLOD=4.1805;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:63.08:0,63,656	0/0:4,0:4:8.96:0,9,102	0/0:14,0:13:35.55:0,36,369	0/0:19,0:18:21.78:0,22,439	0/0:9,0:9:26.97:0,27,287	0/0:6,0:6:18.06:0,18,251	0/0:20,0:20:53.90:0,54,716	0/0:10,0:10:27.04:0,27,300	0/0:12,0:12:36.09:0,36,455	0/0:11,0:11:27.07:0,27,346	0/0:8,0:8:21.03:0,21,228	0/0:18,0:18:54.10:0,54,699	0/0:13,0:13:15.45:0,15,109	0/0:17,0:17:51.16:0,51,688	0/0:20,0:20:51.12:0,51,644	0/0:15,0:15:42.12:0,42,567	0/0:21,0:21:57.10:0,57,724	0/0:16,0:16:41.81:0,42,350	0/0:13,0:13:34.86:0,35,396	0/0:13,0:13:36.08:0,36,443	0/0:33,0:33:92.04:0,92,1175	0/0:7,0:7:18.03:0,18,227	0/0:4,0:4:5.89:0,6,37	0/0:11,0:11:1.42:0,1,84	0/0:17,0:17:48.12:0,48,605	0/1:7,8:16:10.54:259,0,11	0/0:15,0:15:42.06:0,42,543	1/1:4,8:12:29.42:207,29,0
chr10	70597579	.	CCA	C	543.64	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.663;DP=400;FS=0.000;HRun=0;HaplotypeScore=63.8485;InbreedingCoeff=0.7440;MQ=85.05;MQ0=0;MQRankSum=-0.990;QD=22.65;ReadPosRankSum=1.393;VQSLOD=3.6609;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,19:24:48.16:638,48,0	0/0:4,0:4:8.92:0,9,117	0/0:13,0:13:30.60:0,31,339	0/0:20,0:19:47.48:0,47,586	0/0:8,0:8:17.94:0,18,242	0/0:7,0:7:21.01:0,21,250	0/0:19,0:19:54.06:0,54,818	0/0:8,0:8:22.29:0,22,280	0/0:13,0:13:36.09:0,36,546	0/0:12,0:12:30.08:0,30,435	0/0:8,0:8:14.87:0,15,180	0/0:18,0:18:51.05:0,51,796	0/0:14,0:14:9.44:0,9,74	0/0:17,0:17:49.03:0,49,782	0/0:18,0:18:38.02:0,38,649	0/0:14,0:14:39.12:0,39,630	0/0:21,0:21:52.03:0,52,839	0/0:6,0:18:44.98:0,45,390	0/0:13,0:13:33.07:0,33,494	0/0:13,0:13:32.90:0,33,439	0/0:36,0:36:90.20:0,90,1352	0/0:7,0:7:18.04:0,18,268	0/0:4,0:4:3.01:0,3,33	0/0:10,0:10:18.01:0,18,176	0/0:18,0:18:42.09:0,42,595	0/0:15,0:15:45.01:0,45,422	0/0:15,0:15:42:0,42,617	0/0:12,0:12:32.97:0,33,298
chr10	70597660	.	CTT	C	2377.35	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.650;DP=572;FS=2.018;HRun=12;HaplotypeScore=74.9843;InbreedingCoeff=0.9864;MQ=70.45;MQ0=2;MQRankSum=0.018;QD=19.02;ReadPosRankSum=3.406;VQSLOD=3.1692;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:34:78.22:0,78,1065	0/0:8,0:9:23.42:0,23,299	0/0:24,0:13:13.90:0,14,136	0/0:22,0:12:17.02:0,17,194	0/0:20,0:23:53.11:0,53,681	0/0:21,0:22:59.68:0,60,841	0/0:18,0:18:39.11:0,39,543	0/0:14,0:15:32.54:0,33,431	0/0:12,0:13:26.52:0,27,321	0/0:27,0:29:74.19:0,74,987	0/0:17,0:18:47.52:0,48,578	0/0:25,0:25:63.14:0,63,856	1/1:6,11:18:32.79:316,33,0	0/0:8,0:8:15.05:0,15,221	0/0:20,0:20:48.16:0,48,715	0/0:11,0:12:35.58:0,36,476	0/0:40,0:42:99:0,113,1573	1/1:7,31:38:80.90:805,81,0	0/0:19,0:21:41.11:0,41,550	0/0:10,0:10:18.06:0,18,267	0/0:25,0:24:60.13:0,60,827	0/0:18,0:18:39.11:0,39,546	1/1:2,16:18:38.79:396,39,0	1/1:3,16:21:38.63:376,39,0	0/0:16,0:17:32.55:0,33,427	1/1:1,15:16:48.11:488,48,0	0/0:19,0:20:53.40:0,53,662	1/1:6,7:12:18.01:183,18,0
chr10	70597683	.	C	CT	534.16	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=3.571;DP=539;FS=0.000;HRun=7;HaplotypeScore=66.9285;InbreedingCoeff=0.9265;MQ=57.25;MQ0=16;MQRankSum=-6.664;QD=18.42;ReadPosRankSum=1.550;VQSLOD=3.3159;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:65.80:0,66,636	0/0:8,0:8:21.03:0,21,202	./.	0/0:16,0:7:5.95:0,6,46	0/0:23,0:23:44.98:0,45,434	0/0:17,0:17:45.05:0,45,428	0/0:16,0:14:27.04:0,27,261	0/0:21,0:20:39.05:0,39,376	0/0:11,0:11:24.02:0,24,225	0/0:34,0:34:71.62:0,72,690	0/0:15,0:15:42.07:0,42,405	0/0:20,0:20:36.01:0,36,339	0/0:12,0:11:18.03:0,18,174	0/0:10,0:10:24.04:0,24,232	0/0:22,0:22:42.06:0,42,405	0/0:15,0:15:33.04:0,33,318	0/0:43,0:41:99:0,99,936	0/0:43,0:42:81.06:0,81,775	0/0:19,0:17:30.04:0,30,289	0/0:15,0:15:33.04:0,33,312	0/0:18,0:16:33.05:0,33,319	0/0:18,0:17:30.04:0,30,289	0/0:16,0:16:42.07:0,42,405	0/0:21,0:21:35.80:0,36,347	0/0:11,0:11:18.01:0,18,174	1/1:3,13:16:39.12:471,39,0	0/0:19,0:19:42.04:0,42,399	1/1:4,9:12:15.05:181,15,0
chr10	70599990	.	C	CT	1107.96	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=3.174;DP=546;FS=1.703;HRun=7;HaplotypeScore=60.8675;InbreedingCoeff=0.6300;MQ=73.18;MQ0=1;MQRankSum=-1.641;QD=10.76;ReadPosRankSum=0.748;VQSLOD=1.7773;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,35:36:78.23:942,78,0	0/0:7,0:7:18.03:0,18,173	0/1:20,0:17:13.02:13,0,158	0/0:9,0:7:8.60:0,9,76	0/0:18,0:18:54.04:0,54,504	0/0:23,0:23:58.88:0,59,518	0/0:31,0:31:90.06:0,90,842	0/0:16,0:16:39.03:0,39,360	0/0:19,0:19:48.05:0,48,454	0/0:18,0:18:50.15:0,50,424	0/0:13,0:13:39:0,39,364	0/0:14,0:14:38.15:0,38,374	0/0:14,0:14:32:0,32,266	0/0:13,0:13:35.80:0,36,315	0/0:25,0:25:69.04:0,69,641	0/0:30,0:30:81.10:0,81,772	0/0:48,0:48:99:0,117,1075	0/1:30,0:30:67.38:161,0,67	0/0:20,0:20:45.04:0,45,423	0/0:10,0:10:27.04:0,27,260	0/0:23,0:23:56.99:0,57,516	0/0:12,0:12:32.70:0,33,289	0/0:15,0:15:36.03:0,36,342	0/0:32,0:32:90.05:0,90,842	0/0:17,0:17:50.76:0,51,461	1/1:13,0:13:16.93:121,17,0	0/0:15,0:15:35.93:0,36,320	1/1:4,0:4:2.74:12,3,0
chr10	70599997	.	T	TG	875.85	PASS	AB=0.778;AC=6;AF=0.107;AN=56;BaseQRankSum=3.511;DP=565;FS=3.174;HRun=8;HaplotypeScore=64.0020;InbreedingCoeff=0.3088;MQ=72.26;MQ0=1;MQRankSum=0.543;QD=7.89;ReadPosRankSum=1.257;VQSLOD=1.0413;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:8.82:205,0,9	0/0:7,0:7:18:0,18,165	0/1:25,0:19:12.21:12,0,170	0/0:15,0:7:9.46:0,9,80	0/0:21,0:21:53.96:0,54,474	0/0:21,0:21:47.93:0,48,424	0/0:30,0:30:84.02:0,84,759	0/0:16,0:16:32.98:0,33,295	0/0:19,0:19:50.89:0,51,441	0/0:18,0:18:42:0,42,379	0/0:15,0:15:42:0,42,376	0/0:15,0:15:42:0,42,379	0/0:13,0:13:26.46:0,26,222	0/0:17,0:17:38.87:0,39,323	0/0:27,0:27:65.99:0,66,589	0/0:30,0:30:80.99:0,81,722	0/0:49,0:49:99:0,119,1042	0/1:6,25:32:23.06:674,0,23	0/0:15,0:15:36:0,36,329	0/0:10,0:10:29.98:0,30,267	0/0:22,0:22:47.97:0,48,425	0/0:14,0:14:29.97:0,30,265	0/0:15,0:15:41.98:0,42,371	0/0:32,0:32:83.96:0,84,749	0/0:18,0:18:45:0,45,406	0/1:3,0:14:3.68:71,0,4	0/0:15,0:15:32.96:0,33,288	1/1:1,0:2:5.81:34,6,0
chr10	70602119	.	GC	G	356.35	PASS	AB=0.875;AC=10;AF=0.179;AN=56;BaseQRankSum=0.882;DP=398;FS=13.777;HRun=11;HaplotypeScore=54.8772;InbreedingCoeff=0.1665;MQ=83.34;MQ0=1;MQRankSum=-0.811;QD=3.71;ReadPosRankSum=1.141;VQSLOD=-0.3279;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:26:23.38:0,23,178	0/1:3,2:5:15.64:16,0,45	0/0:19,0:18:26.80:0,27,249	0/0:21,0:20:17.74:0,18,288	0/1:9,1:10:9.61:10,0,113	0/0:13,0:13:27.06:0,27,281	0/0:19,5:24:2.42:0,2,231	0/0:11,0:11:6.02:0,6,64	0/0:13,0:13:29.98:0,30,267	0/0:14,0:14:12.02:0,12,121	0/0:5,0:5:5.99:0,6,54	0/0:15,0:15:32.93:0,33,321	0/0:7,0:8:5.67:0,6,28	0/1:11,2:13:33.78:34,0,70	0/1:11,1:12:3.60:4,0,165	0/0:17,0:17:33.06:0,33,338	0/0:19,0:19:36.07:0,36,369	0/0:4,0:10:5.68:0,6,29	0/0:8,1:9:8.99:0,9,81	0/1:7,1:8:18.64:19,0,26	0/1:18,1:18:0.58:1,0,200	0/0:12,1:13:0.75:0,1,219	0/0:3,0:10:5.68:0,6,28	0/0:12,0:21:5.59:0,6,33	0/0:13,1:14:2.54:0,3,224	1/1:7,11:18:26.91:218,27,0	0/0:20,0:20:27.04:0,27,278	1/1:2,9:11:23.97:197,24,0
chr10	70602120	.	C	CA	202.25	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=0.752;DP=392;FS=3.336;HRun=0;HaplotypeScore=58.3913;InbreedingCoeff=0.8893;MQ=79.85;MQ0=1;MQRankSum=-0.672;QD=5.32;ReadPosRankSum=-1.135;VQSLOD=3.0907;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:28.97:0,29,355	0/0:5,0:5:11.98:0,12,113	0/0:17,0:16:38.89:0,39,406	0/0:19,0:18:50.06:0,50,478	0/0:10,0:10:23.88:0,24,250	0/0:14,0:14:33.08:0,33,410	0/0:25,0:25:51:0,51,558	0/0:11,0:11:31.29:0,31,308	0/0:13,0:13:32.70:0,33,317	0/0:15,0:15:33.04:0,33,340	0/0:6,0:6:5.99:0,6,64	0/0:15,0:15:44.38:0,44,470	1/1:2,6:8:6.01:66,6,0	0/0:13,0:13:36.39:0,36,308	0/0:12,0:12:33:0,33,355	0/0:17,0:17:48.09:0,48,558	0/0:18,0:18:48:0,48,553	0/0:10,0:10:11.57:0,12,74	0/0:9,0:9:20.79:0,21,176	0/0:8,0:8:17.89:0,18,154	0/0:18,0:17:38.64:0,39,424	0/0:12,0:12:32.36:0,32,351	1/1:10,0:10:14.59:112,15,0	1/1:18,2:20:20.72:156,21,0	0/0:14,0:14:42.02:0,42,457	0/0:15,0:15:42.86:0,43,310	0/0:20,0:20:51:0,51,549	0/0:11,0:11:29.39:0,29,201
chr10	70602331	.	TTCTTCCG	T	230.53	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.024;DP=635;FS=12.552;HRun=0;HaplotypeScore=141.9770;InbreedingCoeff=0.9622;MQ=83.01;MQ0=0;MQRankSum=-3.368;QD=17.73;ReadPosRankSum=1.543;VQSLOD=2.4076;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,166,6476	0/0:12,0:12:36.12:0,36,1453	0/0:20,0:20:48.16:0,48,1784	0/0:18,0:18:51.18:0,51,1870	0/0:28,0:28:84.29:0,84,3277	0/0:28,0:28:81.25:0,81,3013	0/0:29,0:29:78.27:0,78,3113	0/0:24,0:24:69.23:0,69,2690	0/0:24,0:24:69.24:0,69,2714	0/0:25,0:25:75.26:0,75,3018	0/0:8,0:8:24.08:0,24,969	0/0:35,0:35:99:0,102,4008	0/0:22,0:22:63.22:0,63,2376	0/0:29,0:29:84.27:0,84,3278	0/0:19,0:19:57.20:0,57,2170	0/0:22,0:22:66.23:0,66,2593	0/0:29,0:29:87.30:0,87,3325	1/1:5,8:13:12.04:316,12,0	0/0:24,0:24:69.24:0,69,2435	0/0:22,0:22:63.22:0,63,2504	0/0:30,0:30:90.31:0,90,3559	0/0:14,0:14:42.14:0,42,1654	0/0:17,0:17:48.16:0,48,1906	0/0:21,0:21:63.22:0,63,2486	0/0:11,0:11:33.11:0,33,1333	0/0:21,0:21:63.22:0,63,2383	0/0:25,0:25:75.24:0,75,2931	0/0:7,0:7:21.07:0,21,675
chr10	70606928	.	CATCTATGAACG	C	2260.94	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.688;DP=636;FS=2.755;HRun=0;HaplotypeScore=203.6304;InbreedingCoeff=0.9782;MQ=87.30;MQ0=0;MQRankSum=-7.325;QD=98.30;ReadPosRankSum=2.357;VQSLOD=3.9938;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,5894	0/0:11,0:11:30.10:0,30,1594	0/0:26,0:26:78.27:0,78,3793	0/0:22,0:22:63.05:0,63,2646	0/0:17,0:17:48.16:0,48,2286	0/0:20,0:20:57.20:0,57,3273	0/0:24,0:24:66.21:0,66,3168	0/0:35,0:35:99:0,102,5021	0/0:17,0:17:48.16:0,48,2577	0/0:24,0:24:66.23:0,66,3573	0/0:7,0:7:18.06:0,18,1030	0/0:35,0:35:99:0,102,5589	0/0:23,0:23:69.24:0,69,3731	0/0:35,0:35:99:0,105,5554	0/0:22,0:22:60.21:0,60,2959	0/0:24,0:24:72.25:0,72,4022	0/0:21,0:21:60.19:0,60,3156	0/0:25,0:25:72.16:0,72,3033	0/0:22,0:22:66.21:0,66,3194	0/0:18,0:18:54.19:0,54,3005	0/0:45,0:45:99:0,123,6252	0/0:14,0:14:42.14:0,42,2416	0/0:11,0:11:30.10:0,30,1474	0/0:40,0:40:99:0,117,6507	0/0:8,0:8:24.08:0,24,1307	1/1:0,18:19:57.19:1949,57,0	0/0:22,0:22:60.19:0,60,3183	1/1:0,4:4:12.04:428,12,0
chr10	70607122	.	G	GGTGTGTGT	1086.14	PASS	AB=1.000;AC=10;AF=0.192;AN=52;BaseQRankSum=2.591;DP=587;FS=6.034;HRun=0;HaplotypeScore=154.8031;InbreedingCoeff=0.6090;MQ=61.90;MQ0=27;MQRankSum=-5.271;QD=8.98;ReadPosRankSum=-4.496;VQSLOD=0.8595;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:34.14:0,34,506	0/0:12,0:12:12.50:0,12,228	./.	./.	0/0:15,0:14:8.46:0,8,272	0/0:18,0:20:23.87:0,24,508	0/0:33,0:30:30.03:0,30,605	0/1:24,0:22:22.28:22,0,96	0/0:7,0:8:8.86:0,9,162	0/0:20,0:19:24.49:0,24,373	0/0:10,0:10:8.92:0,9,222	0/0:23,0:23:29.74:0,30,662	1/1:16,4:19:21.27:441,21,0	0/0:30,0:29:29.57:0,30,695	0/0:14,0:14:23.85:0,24,451	0/0:17,0:16:30.06:0,30,664	0/0:25,0:24:12.44:0,12,242	1/1:20,0:26:14.72:260,15,0	0/0:23,0:23:5.07:0,5,84	0/0:11,0:10:15.04:0,15,293	0/0:63,0:58:30.50:0,30,542	0/0:9,0:7:11.90:0,12,223	1/1:13,0:14:2.61:72,3,0	1/1:24,0:24:15.05:437,15,0	0/0:17,0:15:12.03:0,12,216	0/0:27,0:26:12.04:0,12,211	0/1:11,0:11:3.93:4,0,275	0/0:11,0:11:6.02:0,6,95
chr10	70607146	.	TGTGTGTGTGTGTGTGTGC	T	926.03	PASS	AB=0.906;AC=6;AF=0.107;AN=56;BaseQRankSum=4.699;DP=558;FS=2.884;HRun=0;HaplotypeScore=217.7436;InbreedingCoeff=0.1487;MQ=49.96;MQ0=31;MQRankSum=-0.048;QD=9.55;ReadPosRankSum=-2.834;VQSLOD=2.2629;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:37:53.86:54,0,4029	0/0:11,0:11:24.07:0,24,1503	0/0:4,0:4:6:0,6,93	0/0:9,0:5:1.55:0,2,286	0/0:21,0:20:51.11:0,51,2940	0/0:18,0:18:45.12:0,45,3000	0/0:35,0:31:72.10:0,72,3582	0/0:22,0:19:57.13:0,57,2725	0/0:10,0:10:1.34:0,1,1013	0/0:26,0:23:63.19:0,63,3609	0/0:15,0:14:30.05:0,30,1795	0/0:27,0:27:69.22:0,69,4215	0/0:19,0:17:25.45:0,25,941	0/0:29,0:28:48.46:0,48,3534	0/0:15,0:15:39.05:0,39,2199	0/0:16,0:15:45.12:0,45,3093	0/0:24,0:23:63.98:0,64,2757	0/0:31,0:28:61.06:0,61,2681	0/0:16,0:14:38.34:0,38,1907	0/0:11,0:10:26.90:0,27,1685	0/0:61,0:56:99:0,108,5234	0/0:13,0:11:30.78:0,31,1814	0/1:12,0:12:10.49:10,0,543	0/1:20,0:20:3.82:4,0,827	0/0:15,0:13:30.07:0,30,1787	0/1:8,12:19:99:659,0,137	0/0:13,0:13:27.05:0,27,1576	1/1:0,6:6:6.02:313,6,0
chr10	70607317	.	TG	T	786.11	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.019;DP=631;FS=5.838;HRun=1;HaplotypeScore=60.0847;InbreedingCoeff=0.8936;MQ=60.96;MQ0=3;MQRankSum=-1.037;QD=37.43;ReadPosRankSum=1.010;VQSLOD=3.9917;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,2057	0/0:10,0:10:30.08:0,30,455	0/0:11,0:7:18.06:0,18,270	0/0:21,1:18:5.80:0,6,534	0/0:27,0:27:78.27:0,78,1247	0/0:30,0:30:87.26:0,87,1340	0/0:22,0:22:66.23:0,66,1052	0/0:24,0:24:63.21:0,63,998	0/0:22,0:22:66.23:0,66,1055	0/0:27,0:27:81.28:0,81,1294	0/0:26,0:26:75.24:0,75,1160	0/0:18,0:18:54.18:0,54,863	0/0:19,0:19:57.19:0,57,906	0/0:24,0:24:72.25:0,72,1143	0/0:10,0:10:27.09:0,27,432	0/0:27,0:27:81.28:0,81,1295	0/0:23,0:23:69.23:0,69,1085	1/1:0,21:21:63.21:881,63,0	0/0:11,0:10:30.10:0,30,480	0/0:21,0:21:63.21:0,63,1007	0/0:37,0:37:99:0,111,1771	0/0:20,0:20:60.20:0,60,956	0/0:20,0:20:54.16:0,54,838	0/0:20,0:20:60.20:0,60,959	0/0:16,0:16:48.03:0,48,735	0/0:36,0:36:99:0,108,1716	0/0:23,0:23:69.23:0,69,1076	0/0:20,0:20:57.17:0,57,885
chr10	70609277	.	T	TG	937.36	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.411;DP=674;FS=4.369;HRun=7;HaplotypeScore=72.7232;InbreedingCoeff=0.7087;MQ=81.44;MQ0=0;MQRankSum=-2.889;QD=19.53;ReadPosRankSum=0.035;VQSLOD=3.2806;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,30:34:87.20:1032,87,0	0/0:11,0:11:27.04:0,27,261	0/0:24,0:23:5.67:0,6,315	0/1:13,0:14:0.87:1,0,104	0/0:25,0:25:72.08:0,72,682	0/0:22,0:22:60.07:0,60,572	0/0:29,0:29:81.12:0,81,782	0/0:23,0:23:48.06:0,48,464	0/0:29,0:29:78.10:0,78,741	0/0:32,0:32:87.13:0,87,836	0/0:21,0:21:60.08:0,60,574	0/0:19,0:19:51.03:0,51,483	0/0:26,0:26:75.12:0,75,724	0/0:14,0:14:39.01:0,39,366	0/0:28,0:28:78.11:0,78,748	0/0:25,0:25:66.05:0,66,623	0/0:35,0:35:81.12:0,81,782	0/0:22,0:22:60.05:0,60,570	0/0:13,0:13:36.06:0,36,347	0/0:29,0:29:78.13:0,78,753	0/0:24,0:24:60.04:0,60,570	0/0:24,0:24:66.10:0,66,637	0/0:29,0:29:84.11:0,84,799	0/0:31,0:31:90.11:0,90,856	0/0:29,0:29:75.11:0,75,723	0/0:23,0:23:60.10:0,60,579	0/0:28,0:28:72.11:0,72,695	0/0:11,0:11:33.05:0,33,319
chr10	70609952	.	G	GTTATTCTGTTTATAATACCTGGACACC	3094.63	PASS	AB=0.667;AC=39;AF=0.975;AN=40;BaseQRankSum=-1.529;DP=38;FS=0.000;HRun=0;HaplotypeScore=31.7243;InbreedingCoeff=-0.1768;MQ=124.88;MQ0=0;MQRankSum=-1.325;QD=81.44;ReadPosRankSum=-0.306;VQSLOD=2.3086;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	1/1:1,1:4:12.02:706,12,0	0/1:2,0:4:18.27:814,0,18	1/1:1,0:1:2.99:24,3,0	1/1:2,0:2:6:76,6,0	1/1:2,0:2:3.01:39,3,0	1/1:2,0:2:6.02:138,6,0	./.	1/1:1,0:1:3.01:55,3,0	1/1:3,0:3:9.03:319,9,0	1/1:2,0:2:3.01:72,3,0	1/1:1,0:1:3.01:38,3,0	1/1:1,0:1:3.01:73,3,0	1/1:2,0:2:6.02:165,6,0	./.	1/1:3,0:3:6.02:131,6,0	1/1:1,0:1:2.99:23,3,0	1/1:3,0:3:9.03:143,9,0	1/1:1,0:1:3.01:120,3,0	1/1:1,0:1:3.01:79,3,0	./.	./.	1/1:2,0:2:3.01:37,3,0	1/1:1,0:1:3.01:75,3,0	./.	./.	1/1:1,0:1:3.01:52,3,0
chr10	70610072	.	CCCCT	C	829.44	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=6.417;DP=363;FS=24.921;HRun=0;HaplotypeScore=95.6703;InbreedingCoeff=0.7607;MQ=59.30;MQ0=0;MQRankSum=-3.477;QD=10.24;ReadPosRankSum=0.636;VQSLOD=1.1660;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,10:13:23.78:434,24,0	0/0:8,0:7:21.07:0,21,543	0/0:12,0:9:16.19:0,16,536	0/0:17,0:15:37.30:0,37,764	0/0:13,0:13:26.78:0,27,697	0/0:13,0:10:27.09:0,27,668	0/0:20,0:20:50.66:0,51,1188	0/0:18,0:16:33.10:0,33,644	0/0:10,0:10:27.01:0,27,599	0/0:20,0:19:48.62:0,49,1163	0/0:14,0:14:36.12:0,36,877	0/0:13,0:13:30.10:0,30,642	0/1:14,0:12:15.10:82,0,15	0/0:9,0:9:24.08:0,24,619	0/0:16,0:16:39.61:0,40,959	0/0:18,0:17:51.11:0,51,1149	0/0:16,0:15:36.12:0,36,910	1/1:12,0:12:25.66:147,26,0	0/0:11,0:9:27.09:0,27,625	0/0:12,0:12:33.11:0,33,831	0/0:10,0:10:27.09:0,27,669	0/0:13,0:13:33.11:0,33,851	1/1:9,0:7:15.21:91,15,0	1/1:7,0:7:8.60:59,9,0	0/0:11,0:11:27.09:0,27,648	1/1:20,0:17:11.75:152,12,0	0/0:6,0:6:18.05:0,18,402	0/1:6,0:6:18.29:40,0,18
chr10	70610073	.	CCCT	C	2145.97	PASS	AB=0.600;AC=13;AF=0.232;AN=56;BaseQRankSum=3.431;DP=367;FS=16.903;HRun=0;HaplotypeScore=86.6212;InbreedingCoeff=0.9039;MQ=59.30;MQ0=0;MQRankSum=-3.152;QD=26.49;ReadPosRankSum=0.406;VQSLOD=2.5693;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:24:250,24,0	0/0:8,0:7:21.07:0,21,453	0/0:13,0:9:12.99:0,13,436	0/0:17,0:15:38:0,38,631	0/0:13,0:13:26.77:0,27,583	0/0:12,0:10:27.09:0,27,557	0/0:20,0:20:49.98:0,50,990	0/0:19,0:17:36.09:0,36,594	0/0:10,0:10:21.08:0,21,476	0/0:22,0:20:52:0,52,985	0/0:14,0:14:36.12:0,36,730	0/0:13,0:13:30.02:0,30,508	1/1:6,8:12:10.23:420,10,0	0/0:9,0:9:24.08:0,24,517	0/0:17,0:17:42.60:0,43,837	0/0:19,0:17:51.02:0,51,961	0/0:17,0:16:39.11:0,39,780	1/1:2,10:12:27.05:416,27,0	0/0:11,0:9:27.07:0,27,519	0/0:12,0:12:33.11:0,33,691	0/0:10,0:10:27.09:0,27,565	0/0:13,0:13:33.11:0,33,711	1/1:4,5:7:18.05:274,18,0	1/1:0,7:7:9.03:148,9,0	0/0:11,0:11:27.09:0,27,547	1/1:8,12:17:36.33:615,36,0	0/0:6,0:6:17.99:0,18,340	0/1:2,4:6:2.81:206,0,3
chr10	70610124	.	GTC	G	506.97	PASS	AB=0.943;AC=25;AF=0.463;AN=54;BaseQRankSum=0.533;DP=601;FS=0.860;HRun=0;HaplotypeScore=111.4724;InbreedingCoeff=0.1120;MQ=58.26;MQ0=44;MQRankSum=-1.186;QD=1.69;ReadPosRankSum=0.805;VQSLOD=1.4857;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,2:30:53.39:53,0,65	0/1:8,0:8:5.47:5,0,69	./.	0/0:89,0:23:0:0,0,0	0/1:15,3:17:25.86:26,0,38	1/1:17,0:15:2.84:14,3,0	1/1:15,3:18:5.68:46,6,0	0/0:24,0:17:1.25:0,1,3	0/0:14,0:15:6.14:0,6,53	0/1:18,0:17:15.07:19,0,15	1/1:13,0:12:2.99:24,3,0	0/0:10,0:10:12.04:0,12,163	0/0:11,0:12:9.48:0,9,88	0/1:11,0:10:5.89:6,0,41	0/1:13,2:15:33.91:55,0,34	0/1:19,1:20:22.38:22,0,160	0/0:27,0:23:18.32:0,18,191	0/0:19,0:19:7:0,7,32	1/1:8,0:7:2.80:13,3,0	1/1:15,1:17:5.68:46,6,0	1/1:24,2:26:16.07:112,16,0	0/0:16,0:15:6.02:0,6,88	0/1:17,0:16:22.89:23,0,56	0/1:28,1:30:19.40:19,0,409	0/0:11,0:11:7.27:0,7,90	1/1:17,1:20:11.13:56,11,0	1/1:9,1:9:11.62:127,12,0	0/0:7,0:7:0.66:0,1,1
chr10	70615069	.	TTCTCTCTCTCTCTCTCTC	T	927.80	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.916;DP=507;FS=5.814;HRun=0;HaplotypeScore=211.9214;InbreedingCoeff=0.7477;MQ=73.88;MQ0=14;MQRankSum=-3.812;QD=42.17;ReadPosRankSum=0.744;VQSLOD=2.2207;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:27.56:0,28,1655	0/0:4,0:4:9.03:0,9,413	0/0:27,0:17:9.03:0,9,297	0/0:31,0:21:6.02:0,6,266	0/0:9,0:9:9.03:0,9,684	0/0:11,0:11:18.06:0,18,1339	0/0:20,0:23:21.54:0,22,796	0/0:36,0:36:27.08:0,27,1167	0/0:26,0:26:45.15:0,45,2898	0/0:20,0:20:22.63:0,23,1211	0/0:6,0:8:9.03:0,9,433	0/0:16,0:16:27.09:0,27,1926	0/0:22,0:20:37.92:0,38,2060	0/0:18,0:22:15.05:0,15,983	0/0:12,0:12:15.05:0,15,664	0/0:12,0:12:9.03:0,9,438	0/0:23,0:22:33.11:0,33,2061	0/0:17,0:16:18.06:0,18,825	0/0:16,0:18:27.06:0,27,1194	0/0:13,0:13:16.30:0,16,567	0/0:23,0:23:39.10:0,39,2412	0/0:11,0:12:18.06:0,18,1031	0/0:13,0:13:15.52:0,16,730	0/0:30,0:29:36.12:0,36,2314	0/0:11,0:11:15.05:0,15,673	1/1:9,5:13:15.05:730,15,0	0/0:15,0:14:21.07:0,21,1438	1/1:7,1:8:9.01:308,9,0
chr10	70615115	.	CCACACACACACA	C	1489.04	PASS	AB=0.667;AC=3;AF=0.056;AN=54;BaseQRankSum=4.930;DP=466;FS=2.355;HRun=0;HaplotypeScore=153.4074;InbreedingCoeff=0.4318;MQ=47.68;MQ0=19;MQRankSum=-6.358;QD=51.35;ReadPosRankSum=-0.929;VQSLOD=3.4195;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:45.56:0,46,1370	0/0:8,0:7:12.04:0,12,638	./.	0/0:3,0:2:6.02:0,6,324	0/0:16,0:16:33.11:0,33,1692	0/0:20,0:20:30.57:0,31,1409	0/0:21,0:16:24.08:0,24,1138	0/0:17,0:16:18.06:0,18,702	0/0:18,0:24:38.90:0,39,1668	0/0:18,0:17:48.16:0,48,2028	0/0:11,0:11:15.05:0,15,717	0/0:30,0:29:45.63:0,46,2196	0/0:17,0:15:6.02:0,6,292	0/0:19,0:18:18.06:0,18,1018	0/0:12,0:12:24.55:0,25,1290	0/0:19,0:19:39.61:0,40,2193	0/0:21,0:20:45.15:0,45,2267	0/0:7,0:10:3.01:0,3,151	0/0:9,0:8:18.06:0,18,594	0/0:10,0:9:15.52:0,16,759	0/0:30,0:27:29.87:0,30,1245	0/0:21,0:20:28.04:0,28,1252	0/0:12,0:12:9.43:0,9,78	0/0:31,0:30:18.53:0,19,500	0/0:15,0:15:21.54:0,22,961	0/1:11,11:22:78.21:1214,0,78	0/0:13,0:13:27.09:0,27,1221	1/1:5,1:6:12.03:374,12,0
chr10	70615152	.	C	CACACACACAG	895.48	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=2.348;DP=546;FS=4.224;HRun=0;HaplotypeScore=159.4129;InbreedingCoeff=0.5750;MQ=64.41;MQ0=10;MQRankSum=-0.491;QD=9.73;ReadPosRankSum=-1.959;VQSLOD=2.4446;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:99:279,0,462	0/0:10,0:9:24.01:0,24,469	0/0:22,0:13:38.80:0,39,336	0/0:32,0:25:54.21:0,54,489	0/0:17,0:17:45.07:0,45,1035	0/0:20,0:20:47.51:0,48,793	0/0:19,0:19:48.74:0,49,811	0/0:30,0:30:87.06:0,87,862	0/0:20,0:20:30.06:0,30,664	0/0:23,0:23:66.10:0,66,1197	0/0:10,0:10:23.98:0,24,477	0/0:22,0:22:51.05:0,51,1234	1/1:2,11:18:12.21:430,12,0	0/0:24,0:24:51:0,51,877	0/0:17,0:17:45.07:0,45,980	0/0:18,0:18:50.62:0,51,1299	0/0:26,0:26:58.04:0,58,1247	0/1:11,0:10:91.71:97,0,92	0/0:20,0:19:53.64:0,54,530	0/0:12,0:11:20.98:0,21,453	0/0:32,0:30:49.24:0,49,846	0/0:16,0:15:42.01:0,42,750	0/0:1,0:13:0.47:0,0,1	1/1:7,17:34:9.12:216,9,0	0/0:9,0:9:24.03:0,24,619	0/0:22,0:21:63.04:0,63,1217	0/0:14,0:14:41.94:0,42,761	0/0:6,0:5:15.03:0,15,307
chr10	70619118	.	ATGTGTG	A	2234.39	PASS	AB=0.661;AC=8;AF=0.143;AN=56;BaseQRankSum=9.121;DP=833;FS=3.802;HRun=0;HaplotypeScore=203.3206;InbreedingCoeff=0.4271;MQ=65.05;MQ0=8;MQRankSum=-7.279;QD=12.21;ReadPosRankSum=2.414;VQSLOD=2.2979;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,20:48:30.54:552,0,31	0/0:11,0:10:18.04:0,18,461	0/0:37,0:23:6.02:0,6,125	0/0:34,0:22:9.03:0,9,243	0/0:30,0:30:48.15:0,48,1355	0/0:31,0:30:51.18:0,51,1519	0/0:34,0:34:72.23:0,72,2094	0/0:35,0:35:51.17:0,51,1394	0/0:13,0:29:57.18:0,57,1435	0/0:33,0:35:66.18:0,66,1719	0/0:23,0:24:45.15:0,45,1304	0/0:28,0:29:48.16:0,48,1416	1/1:14,17:36:69.19:1259,69,0	0/0:26,0:28:66.17:0,66,1761	0/0:25,0:50:51.43:0,51,1259	0/0:22,0:36:72.21:0,72,1971	0/0:29,0:29:51.15:0,51,1558	0/0:29,0:28:35.36:0,35,1609	0/0:13,0:14:30.10:0,30,779	0/0:19,0:19:24.08:0,24,571	0/0:35,0:34:54.12:0,54,1585	0/0:29,0:29:57.18:0,57,1682	1/1:8,10:18:18.06:352,18,0	0/1:13,13:27:21.92:154,0,22	0/0:24,0:24:42.13:0,42,1158	0/1:27,1:43:57.09:57,0,83	0/0:27,0:27:63.22:0,63,1933	0/1:3,0:11:0.47:0,0,102
chr10	70619412	.	CATGT	C	2227.57	PASS	AB=0.981;AC=11;AF=0.196;AN=56;BaseQRankSum=11.630;DP=820;FS=2.268;HRun=0;HaplotypeScore=134.4111;InbreedingCoeff=0.8304;MQ=61.70;MQ0=18;MQRankSum=1.382;QD=12.44;ReadPosRankSum=1.538;VQSLOD=3.5701;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:51,1:52:99:372,0,464	0/0:13,0:13:36.03:0,36,632	0/0:45,0:21:35.72:0,36,493	0/0:51,0:21:43.33:0,43,512	0/0:14,0:14:20.97:0,21,577	0/0:17,0:16:44.78:0,45,509	0/0:27,0:27:68.93:0,69,965	0/0:45,0:40:99:0,114,1096	0/0:24,0:24:66.02:0,66,1028	0/0:38,0:38:99:0,108,1114	0/0:15,0:15:41.89:0,42,473	0/0:34,0:34:90.11:0,90,1452	1/1:19,3:27:66.37:679,66,0	0/0:33,0:33:54.39:0,54,1158	0/0:33,0:33:73.02:0,73,1349	0/0:32,0:32:92.21:0,92,1167	0/0:29,0:29:83.88:0,84,1134	0/0:23,0:23:49.93:0,50,707	0/0:21,0:20:55.89:0,56,536	0/0:23,0:23:62.96:0,63,722	0/0:74,0:73:99:0,160,2287	0/0:17,0:17:41.97:0,42,521	1/1:0,14:17:9.76:164,10,0	1/1:2,21:23:17.86:345,18,0	0/0:15,0:15:36.03:0,36,585	1/1:0,1:48:99:773,119,0	0/0:17,0:17:47.89:0,48,669	1/1:0,12:12:3.01:61,3,0
chr10	70619413	.	ATG	A	814.43	PASS	AB=0.928;AC=19;AF=0.365;AN=52;BaseQRankSum=9.122;DP=846;FS=0.542;HRun=0;HaplotypeScore=113.6617;InbreedingCoeff=0.2071;MQ=60.99;MQ0=20;MQRankSum=1.059;QD=2.23;ReadPosRankSum=3.731;VQSLOD=1.7581;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:48,0:48:6.52:7,0,503	0/0:12,0:13:21.04:0,21,266	./.	./.	0/1:15,0:15:8.44:8,0,198	0/1:17,2:18:15.58:16,0,145	0/0:29,0:32:36.12:0,36,523	0/0:46,0:41:9.92:0,10,128	0/0:25,0:24:30.10:0,30,443	0/0:45,0:45:41.40:0,41,462	0/0:15,0:15:9.03:0,9,129	0/1:30,4:35:26.56:27,0,427	1/1:27,0:27:9.20:146,9,0	0/0:31,0:34:17.89:0,18,356	0/0:33,0:34:27.94:0,28,503	0/1:29,2:32:5.75:6,0,324	0/1:25,3:28:68.39:68,0,275	0/0:9,0:23:24:0,24,209	0/0:20,0:19:5.99:0,6,67	0/1:21,3:24:74.45:74,0,184	0/0:75,0:75:57.92:0,58,839	0/0:20,0:20:18.04:0,18,234	1/1:18,0:18:11.35:65,11,0	1/1:23,1:24:14.25:97,14,0	0/1:15,1:16:11.78:12,0,220	1/1:50,0:50:24.72:401,25,0	0/1:16,2:18:44.62:45,0,200	1/1:12,0:12:2.84:14,3,0
chr10	70620406	.	A	AAC	154.58	PASS	AB=0.982;AC=13;AF=0.361;AN=36;BaseQRankSum=0.040;DP=515;FS=0.000;HRun=0;HaplotypeScore=85.7854;InbreedingCoeff=0.3332;MQ=69.92;MQ0=15;MQRankSum=0.040;QD=1.03;ReadPosRankSum=-0.873;VQSLOD=1.4211;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:2.21:0,2,7	./.	./.	./.	0/1:6,1:10:34.41:34,0,36	0/0:25,0:24:0.15:0,0,34	0/1:27,0:25:0:0,0,0	./.	0/0:12,0:12:0.47:0,0,1	0/0:15,0:15:1.97:0,2,12	./.	0/1:19,0:18:0:0,0,0	1/1:9,0:9:1.52:3,2,0	1/1:14,0:14:3:26,3,0	1/1:20,0:21:17.97:154,18,0	1/1:11,8:19:3.01:37,3,0	0/0:31,0:33:14.18:0,14,112	./.	./.	./.	0/0:30,0:30:9.01:0,9,94	0/0:14,0:15:5.84:0,6,45	./.	0/0:40,0:38:4.40:0,4,18	0/0:14,0:14:2.76:0,3,14	0/1:19,0:17:0:0,0,0	0/1:12,0:12:0:0,0,0	./.
chr10	70620558	.	TA	T	5413.24	PASS	AB=0.924;AC=53;AF=0.946;AN=56;BaseQRankSum=-4.899;DP=632;FS=23.671;HRun=2;HaplotypeScore=146.4469;InbreedingCoeff=-0.0505;MQ=76.38;MQ0=0;MQRankSum=5.410;QD=8.57;ReadPosRankSum=4.062;VQSLOD=1.0099;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:57,0:57:99:468,104,0	0/1:13,0:13:0.77:54,0,1	0/1:12,1:13:42.63:43,0,204	0/1:13,3:16:50.58:51,0,189	1/1:20,0:20:17.84:165,18,0	1/1:29,0:29:36.95:204,37,0	1/1:28,0:28:61.01:267,61,0	1/1:24,0:24:54.15:313,54,0	1/1:19,0:19:15.60:147,16,0	1/1:21,0:21:51.24:265,51,0	1/1:21,0:21:51.30:208,51,0	1/1:22,0:22:27.63:143,28,0	1/1:12,0:12:18.48:103,18,0	1/1:27,0:27:13.79:160,14,0	1/1:22,0:22:43.76:171,44,0	1/1:21,0:21:39.99:195,40,0	1/1:30,0:30:67.42:289,67,0	1/1:23,0:22:33.10:178,33,0	1/1:15,0:15:32.05:193,32,0	1/1:17,0:17:40.60:138,41,0	1/1:31,0:31:73.66:312,74,0	1/1:23,0:23:31.33:190,31,0	1/1:23,0:23:43.26:151,43,0	1/1:35,0:35:66.92:300,67,0	1/1:11,0:11:27.21:125,27,0	1/1:33,0:33:83.45:420,83,0	1/1:20,0:20:19.65:87,20,0	1/1:6,0:6:14.10:75,14,0
chr10	70620777	.	T	TC	481.24	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=1.912;DP=519;FS=5.128;HRun=10;HaplotypeScore=63.6966;InbreedingCoeff=0.8233;MQ=75.02;MQ0=0;MQRankSum=-0.659;QD=4.63;ReadPosRankSum=-1.308;VQSLOD=0.5620;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:36:21.50:120,22,0	./.	0/1:21,0:19:2.24:2,0,108	0/0:17,0:17:16.93:0,17,124	0/0:16,0:16:17.94:0,18,148	0/0:17,0:18:32.44:0,32,253	0/0:37,0:37:77.82:0,78,636	0/0:14,0:14:8.96:0,9,74	0/0:16,1:17:6.95:0,7,263	0/0:17,0:18:41.76:0,42,342	0/0:15,0:15:17.92:0,18,145	0/0:25,0:25:53.48:0,53,427	1/1:6,7:13:14.72:153,15,0	0/0:23,0:23:13.88:0,14,270	0/0:17,0:18:18.49:0,18,226	0/0:25,0:25:50.89:0,51,419	0/0:31,0:30:62.81:0,63,513	0/0:25,0:25:62.90:0,63,517	0/0:10,0:10:23.96:0,24,195	0/0:10,0:10:14.95:0,15,123	0/0:24,0:24:47.09:0,47,372	0/0:10,0:10:17.97:0,18,148	1/1:2,4:6:6.02:64,6,0	1/1:8,11:19:23.89:238,24,0	0/0:18,0:19:34.93:0,35,270	0/0:20,0:20:38.91:0,39,318	0/0:21,0:22:46.95:0,47,375	1/1:4,5:9:6.01:64,6,0
chr10	70621344	.	T	TC	5465.49	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-13.224;DP=615;FS=5.659;HRun=3;HaplotypeScore=57.8989;InbreedingCoeff=0.9981;MQ=85.80;MQ0=0;MQRankSum=-2.203;QD=37.69;ReadPosRankSum=3.634;VQSLOD=5.2318;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:87.29:1217,87,0	0/0:9,0:9:24.07:0,24,288	0/0:22,0:21:54.16:0,54,647	0/0:19,0:19:53.96:0,54,610	0/0:18,0:18:54.17:0,54,648	0/0:24,0:24:72.22:0,72,864	0/0:23,0:23:63.19:0,63,756	0/0:36,0:36:93.28:0,93,1116	0/0:23,0:23:63.18:0,63,744	0/0:14,0:14:42.12:0,42,496	0/0:10,0:10:24.07:0,24,288	0/0:39,0:39:99:0,114,1356	1/1:0,26:26:69.23:966,69,0	0/0:26,0:26:75.23:0,75,900	0/0:25,0:25:69.21:0,69,826	0/0:18,0:18:51.16:0,51,612	0/0:23,0:23:69.17:0,69,801	0/0:26,0:26:75.20:0,75,883	0/0:18,0:18:48.15:0,48,576	0/0:17,0:17:48.15:0,48,576	0/0:35,0:35:99:0,102,1224	0/0:17,0:17:51.16:0,51,609	1/1:0,9:9:27.09:378,27,0	1/1:0,44:44:99:1723,123,0	0/0:14,0:14:42.13:0,42,504	1/1:2,18:20:21.18:720,21,0	0/0:14,0:14:42.11:0,42,491	1/1:0,13:13:33.11:462,33,0
chr10	70621524	.	CA	C	453.52	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.073;DP=704;FS=0.000;HRun=1;HaplotypeScore=79.2777;InbreedingCoeff=0.9365;MQ=86.44;MQ0=0;MQRankSum=-7.420;QD=15.12;ReadPosRankSum=1.134;VQSLOD=3.3203;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,1934	0/0:7,0:7:21.04:0,21,310	0/0:26,0:26:75.13:0,75,1109	0/0:22,0:22:63.02:0,63,918	0/0:20,0:20:60.15:0,60,886	0/0:25,0:25:75.17:0,75,1167	0/0:22,0:22:66.23:0,66,1052	0/0:33,0:33:99:0,99,1581	0/0:30,0:30:90.24:0,90,1341	0/0:33,0:33:99:0,99,1563	0/0:18,0:18:51.16:0,51,779	0/0:31,0:31:93.29:0,93,1442	0/0:23,0:23:69.19:0,69,1026	0/0:33,0:33:99:0,99,1538	0/0:32,0:32:96.28:0,96,1464	0/0:26,0:26:78.27:0,78,1246	0/0:28,0:28:84.29:0,84,1339	0/0:21,0:21:63.15:0,63,951	0/0:18,0:18:53.90:0,54,801	0/0:22,0:22:63.16:0,63,934	0/0:55,0:55:99:0,165,2554	0/0:22,0:22:63.17:0,63,937	0/0:19,0:19:57.15:0,57,840	0/0:24,0:24:72.23:0,72,1115	0/0:18,0:18:54.16:0,54,819	1/1:2,18:20:5.99:396,6,0	0/0:21,0:21:63.21:0,63,1003	1/1:0,10:10:18.01:167,18,0
chr10	70621527	.	TTCACAGTTCTAA	T	1982.91	PASS	AB=0.529;AC=3;AF=0.054;AN=56;BaseQRankSum=7.921;DP=695;FS=0.000;HRun=0;HaplotypeScore=236.1767;InbreedingCoeff=0.6388;MQ=87.34;MQ0=0;MQRankSum=-7.203;QD=82.62;ReadPosRankSum=1.597;VQSLOD=3.2480;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,7347	0/0:7,0:7:21.07:0,21,1295	0/0:27,0:27:78.25:0,78,3710	0/0:24,0:23:57.33:0,57,3259	0/0:20,0:20:60.21:0,60,3734	0/0:26,0:26:75.26:0,75,4334	0/0:23,0:23:69.24:0,69,3996	0/0:34,0:34:99:0,102,5678	0/0:28,0:28:81.28:0,81,4864	0/0:33,0:33:99:0,99,5887	0/0:17,0:17:51.13:0,51,2959	0/0:33,0:33:99:0,99,6052	0/0:24,0:24:72.25:0,72,4026	0/0:33,0:33:99:0,99,5630	0/0:30,0:30:90.31:0,90,5474	0/0:28,0:28:84.29:0,84,5228	0/0:28,0:28:84.27:0,84,5119	0/0:20,0:20:60.19:0,60,3322	0/0:19,0:19:57.19:0,57,2933	0/0:20,0:20:57.20:0,57,3392	0/0:54,0:54:99:0,163,9811	0/0:21,0:21:63.22:0,63,3947	0/0:16,0:16:48.16:0,48,2885	0/0:25,0:25:75.21:0,75,4559	0/0:17,0:17:51.18:0,51,2979	0/1:2,16:18:99:1504,0,143	0/0:23,0:23:69.24:0,69,4139	1/1:1,5:6:18.06:583,18,0
chr10	70621922	.	C	CAT	5898	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-10.878;DP=611;FS=2.970;HRun=0;HaplotypeScore=74.6683;InbreedingCoeff=0.9947;MQ=86.07;MQ0=0;MQRankSum=-2.742;QD=55.12;ReadPosRankSum=3.688;VQSLOD=5.3089;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,42:44:99:2434,120,0	0/0:5,0:5:15.05:0,15,244	0/0:27,0:27:75.23:0,75,1122	0/0:21,0:21:63.09:0,63,906	0/0:14,0:14:42.13:0,42,651	0/0:20,0:20:51.13:0,51,797	0/0:35,0:35:99:0,102,1656	0/0:28,0:28:81.20:0,81,1244	0/0:26,0:26:75.24:0,75,1188	0/0:13,0:13:39.07:0,39,576	0/0:15,0:15:39.09:0,39,602	0/0:19,0:19:51.17:0,51,830	1/1:0,16:17:45.15:914,45,0	0/0:24,0:24:69.22:0,69,1096	0/0:24,0:24:72.25:0,72,1170	0/0:21,0:21:60.20:0,60,971	0/0:26,0:26:78.27:0,78,1267	0/0:24,0:24:66.21:0,66,1050	0/0:19,0:19:54.11:0,54,797	0/0:13,0:13:39.06:0,39,575	0/0:55,0:55:99:0,154,2481	0/0:12,0:12:33.06:0,33,507	1/1:1,10:11:24.08:479,24,0	1/1:0,35:35:99:2071,102,0	0/0:11,0:11:33.08:0,33,510	0/0:18,0:18:51.14:0,51,779	0/0:23,0:23:69.24:0,69,1117	0/0:11,0:11:30.10:0,30,489
chr10	70622141	.	CTTTCT	C	636	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=4.525;DP=573;FS=1.890;HRun=0;HaplotypeScore=101.8746;InbreedingCoeff=0.3977;MQ=50.80;MQ0=35;MQRankSum=-2.792;QD=9.64;ReadPosRankSum=0.216;VQSLOD=2.6808;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:52:99:0,124,3055	0/0:9,0:8:24.06:0,24,517	0/0:7,0:3:2.94:0,3,18	0/0:8,0:5:8.33:0,8,46	0/0:25,0:25:57.14:0,57,1243	0/0:21,0:17:42.13:0,42,1104	0/0:17,0:16:45.07:0,45,991	0/0:17,0:14:32.73:0,33,497	0/0:23,0:22:54.04:0,54,1171	0/0:33,0:33:87.60:0,88,1623	0/0:19,0:18:23.34:0,23,936	0/0:20,0:19:50.73:0,51,1052	0/0:16,0:16:15.03:0,15,251	0/0:24,0:22:54.15:0,54,1314	0/0:15,0:14:39.09:0,39,812	0/0:11,0:11:33.09:0,33,707	0/0:39,0:37:71.21:0,71,1641	1/1:4,16:18:36.10:710,36,0	0/0:22,0:17:45.07:0,45,731	0/0:14,0:14:27.05:0,27,622	0/0:13,0:11:18.05:0,18,468	0/0:17,0:15:39.08:0,39,855	0/1:13,0:13:17.37:17,0,217	0/0:21,0:18:20.68:0,21,275	0/0:24,0:22:51.61:0,52,1311	0/1:33,0:32:23:23,0,1174	0/0:17,0:16:36.07:0,36,836	0/0:18,0:16:33.10:0,33,552
chr10	70622145	.	CT	C	614.35	PASS	AB=0.635;AC=5;AF=0.096;AN=52;BaseQRankSum=4.341;DP=562;FS=0.563;HRun=12;HaplotypeScore=67.0659;InbreedingCoeff=0.4652;MQ=48.21;MQ0=40;MQRankSum=0.676;QD=8.90;ReadPosRankSum=3.448;VQSLOD=2.6967;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:56:99:0,111,1045	0/0:9,0:8:18.04:0,18,182	./.	./.	0/0:22,0:23:41.22:0,41,437	0/0:19,0:15:36.07:0,36,361	0/0:17,0:17:35.85:0,36,331	0/0:14,1:12:0.82:0,1,190	0/0:20,1:20:24.86:0,25,432	0/0:31,0:31:63.07:0,63,617	0/0:17,1:17:15.73:0,16,326	0/0:20,1:20:15.25:0,15,294	0/0:4,0:19:14.96:0,15,102	0/0:24,0:21:48.02:0,48,457	0/0:15,0:14:25.85:0,26,241	0/0:11,1:12:3.78:0,4,210	0/0:34,3:35:0.28:0,0,526	1/1:20,0:17:33.77:170,34,0	0/0:21,0:16:45.09:0,45,455	0/0:14,0:13:27:0,27,255	0/0:12,0:10:18.04:0,18,183	0/0:16,0:14:29.85:0,30,274	0/0:5,0:15:17.61:0,18,95	0/0:7,0:20:12.02:0,12,74	0/0:21,0:19:45.56:0,46,457	0/1:14,19:32:25.62:373,0,26	0/0:18,0:17:39.02:0,39,375	1/1:3,12:14:1.49:184,1,0
chr10	70622515	.	TAC	T	44.48	PASS	AB=0.978;AC=9;AF=0.205;AN=44;BaseQRankSum=1.121;DP=439;FS=0.000;HRun=0;HaplotypeScore=65.5829;InbreedingCoeff=-0.0303;MQ=64.56;MQ0=8;MQRankSum=0.697;QD=0.38;ReadPosRankSum=0.717;VQSLOD=1.3452;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:17.40:0,17,211	./.	./.	./.	0/0:8,1:9:3.01:0,3,42	0/0:13,0:13:6.02:0,6,84	0/1:22,0:22:22.38:22,0,58	./.	0/0:12,0:12:9.01:0,9,95	0/0:18,0:18:6.41:0,6,41	0/0:4,0:4:3.01:0,3,42	0/0:12,0:12:9.03:0,9,123	0/0:8,0:8:3.01:0,3,42	1/1:13,0:13:3:31,3,0	0/0:17,0:17:5.80:0,6,64	0/1:11,0:11:25.99:26,0,36	0/1:20,1:20:21.88:22,0,190	0/1:13,1:14:23.19:23,0,58	1/1:10,0:10:3:32,3,0	./.	0/1:25,0:24:5.60:6,0,70	0/0:12,1:13:3:0,3,43	0/0:9,0:9:3.01:0,3,41	0/0:27,0:26:7.24:0,7,101	./.	0/0:15,0:15:11.30:0,11,80	0/0:13,0:13:6.02:0,6,83	0/0:5,0:5:3.48:0,3,30
chr10	70626436	.	C	CTTT	1483.06	PASS	AB=0.597;AC=7;AF=0.125;AN=56;BaseQRankSum=4.698;DP=708;FS=2.961;HRun=10;HaplotypeScore=108.3210;InbreedingCoeff=0.8268;MQ=70.25;MQ0=1;MQRankSum=-1.490;QD=13.99;ReadPosRankSum=-2.585;VQSLOD=1.0969;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:37:35.20:110,0,35	0/0:18,0:18:39.01:0,39,434	0/0:17,0:18:26.89:0,27,283	0/0:14,0:12:26.69:0,27,295	0/0:29,0:29:20.88:0,21,660	0/0:34,0:34:81.17:0,81,968	0/0:26,0:26:66.15:0,66,787	0/0:26,0:27:54.31:0,54,613	0/0:23,0:24:53.97:0,54,597	0/0:28,0:28:63.04:0,63,731	0/0:20,0:20:51.13:0,51,608	0/0:25,0:25:57.01:0,57,652	1/1:9,13:23:15.05:289,15,0	0/0:21,0:21:45.51:0,46,555	0/0:26,0:26:72.18:0,72,862	0/0:27,0:28:78.15:0,78,930	0/0:34,0:36:86.87:0,87,983	0/0:18,0:18:47.90:0,48,559	0/0:24,0:26:46.06:0,46,488	0/0:29,0:30:52.09:0,52,784	0/0:34,0:35:84.07:0,84,961	0/0:22,0:23:58.51:0,59,727	1/1:2,19:27:49.28:751,49,0	1/1:3,15:18:27.05:481,27,0	0/0:39,0:39:90.14:0,90,1094	0/0:22,0:22:45:0,45,535	0/0:25,0:25:60.01:0,60,691	0/0:8,0:9:17.95:0,18,200
chr10	70628267	.	TG	T	1810.79	PASS	AB=0.990;AC=11;AF=0.196;AN=56;BaseQRankSum=7.247;DP=571;FS=0.000;HRun=9;HaplotypeScore=64.6173;InbreedingCoeff=0.6861;MQ=70.97;MQ0=3;MQRankSum=-0.144;QD=11.84;ReadPosRankSum=1.772;VQSLOD=2.9021;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,28:32:75.04:684,75,0	0/1:7,0:7:7.46:7,0,90	0/1:31,0:23:7.72:8,0,218	0/1:19,0:13:18.14:18,0,90	0/0:17,0:17:36.08:0,36,392	0/0:19,0:19:39.08:0,39,428	0/0:34,0:34:90.07:0,90,993	0/0:23,0:23:54.10:0,54,576	0/0:19,0:19:51.09:0,51,550	0/0:24,0:24:53.82:0,54,610	0/0:17,0:17:17.44:0,17,412	0/0:17,0:17:39.09:0,39,429	1/1:3,16:19:38.81:356,39,0	0/0:21,0:21:54.10:0,54,582	0/0:18,0:18:39.08:0,39,427	0/0:20,1:21:32.79:0,33,626	0/0:38,0:38:90.23:0,90,1013	0/0:4,0:18:39.94:0,40,220	0/0:25,0:25:57.11:0,57,609	0/0:9,0:9:24.07:0,24,274	0/0:21,0:21:48.10:0,48,527	0/0:11,0:11:24.07:0,24,275	1/1:4,11:15:39.02:355,39,0	1/1:8,21:29:26.72:553,27,0	0/0:18,0:18:45.10:0,45,491	0/0:6,0:17:26.52:0,27,183	0/0:20,0:20:54.11:0,54,587	0/0:3,0:11:31.68:0,32,199
chr10	70630667	.	GT	G	619.69	PASS	AB=0.828;AC=5;AF=0.089;AN=56;BaseQRankSum=6.954;DP=619;FS=6.811;HRun=11;HaplotypeScore=68.2113;InbreedingCoeff=0.3737;MQ=70.13;MQ0=0;MQRankSum=-0.935;QD=8.73;ReadPosRankSum=1.276;VQSLOD=2.3861;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,2:38:44.40:0,44,867	0/0:12,0:14:35.92:0,36,366	0/0:19,0:19:28.51:0,29,272	0/1:9,0:9:6.89:7,0,114	0/0:28,2:30:25.90:0,26,670	0/0:30,0:30:72.17:0,72,760	0/0:26,1:28:50.38:0,50,725	0/0:22,0:22:52.42:0,52,565	0/0:21,0:22:53.95:0,54,543	0/0:25,1:27:44.35:0,44,654	0/0:15,0:16:44.97:0,45,454	0/0:21,1:23:41.32:0,41,618	0/0:17,0:17:42.09:0,42,440	0/0:14,1:16:14.27:0,14,333	0/0:24,0:25:35.60:0,36,565	0/0:21,0:22:59.95:0,60,601	0/0:19,0:19:48.11:0,48,503	0/0:26,1:28:44.42:0,44,639	0/0:9,1:10:5.43:0,5,261	0/0:33,0:34:87.93:0,88,905	0/1:16,2:18:7.19:7,0,335	0/0:25,0:25:54.07:0,54,555	0/0:21,0:21:54.12:0,54,567	0/0:16,0:16:48.12:0,48,512	0/0:11,0:12:29.91:0,30,302	1/1:11,26:37:48.83:602,49,0	0/0:33,0:33:90.17:0,90,926	0/1:2,5:7:10.79:119,0,11
chr10	70634290	.	A	AATATAT	2237.87	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.062;DP=645;FS=1.235;HRun=0;HaplotypeScore=139.2882;InbreedingCoeff=0.9725;MQ=69.90;MQ0=1;MQRankSum=-3.215;QD=29.45;ReadPosRankSum=-0.743;VQSLOD=2.8821;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:40:76.30:1058,76,0	0/0:13,0:13:36.12:0,36,781	0/0:14,0:14:10.51:0,11,482	0/0:12,0:12:12.04:0,12,252	0/0:30,0:31:75.26:0,75,1543	0/0:24,0:24:66.21:0,66,1375	0/0:23,0:23:54.16:0,54,1074	0/0:34,0:33:69.24:0,69,1462	0/0:23,0:23:66.21:0,66,1357	0/0:27,0:29:66.20:0,66,1243	0/0:25,0:25:57.19:0,57,1224	0/0:32,0:32:81.25:0,81,1627	0/0:18,0:18:33.11:0,33,716	0/0:28,0:29:81.26:0,81,1696	0/0:25,0:26:63.21:0,63,1345	0/0:24,0:24:66.23:0,66,1433	0/0:30,0:30:72.25:0,72,1563	0/0:15,0:15:39.13:0,39,846	0/0:21,0:21:45.14:0,45,898	0/0:23,0:23:57.15:0,57,1103	0/0:19,0:18:51.16:0,51,1053	0/0:18,0:18:51.16:0,51,1016	0/0:22,0:22:51.16:0,51,1035	0/0:22,0:22:57.15:0,57,1192	0/0:19,0:18:44.97:0,45,958	1/1:15,2:22:30.10:678,30,0	0/0:23,0:23:57.20:0,57,1223	1/1:6,7:14:21.07:644,21,0
chr10	70634437	.	TC	T	762.22	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.827;DP=772;FS=1.710;HRun=2;HaplotypeScore=72.0865;InbreedingCoeff=0.9992;MQ=84.50;MQ0=0;MQRankSum=-1.751;QD=31.76;ReadPosRankSum=0.492;VQSLOD=3.3932;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,1965	0/0:10,0:10:30.10:0,30,450	0/0:21,0:21:63.10:0,63,877	0/0:25,0:25:66.20:0,66,1009	0/0:27,0:27:81.26:0,81,1194	0/0:24,0:24:72.24:0,72,1076	0/0:37,0:37:99:0,111,1626	0/0:37,0:37:99:0,105,1572	0/0:34,0:34:99:0,99,1461	0/0:28,0:28:81.24:0,81,1143	0/0:13,0:13:39.12:0,39,562	0/0:30,0:30:87.29:0,87,1303	0/0:28,0:28:84.28:0,84,1258	0/0:34,0:34:96.33:0,96,1437	0/0:35,0:35:99:0,105,1570	0/0:25,0:25:75.25:0,75,1123	0/0:45,0:45:99:0,135,1961	1/1:0,24:24:66.21:857,66,0	0/0:23,0:23:69.19:0,69,1007	0/0:24,0:24:72.24:0,72,1079	0/0:52,0:52:99:0,151,2247	0/0:20,0:20:57.16:0,57,813	0/0:21,0:21:63.20:0,63,925	0/0:27,0:27:81.26:0,81,1193	0/0:27,0:27:75.25:0,75,1123	0/0:18,0:18:48.16:0,48,719	0/0:25,0:25:69.23:0,69,1016	0/0:11,0:11:33.11:0,33,495
chr10	70635584	.	G	GC	6886.66	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-14.709;DP=716;FS=1.427;HRun=3;HaplotypeScore=67.4427;InbreedingCoeff=0.9996;MQ=83.91;MQ0=0;MQRankSum=-5.212;QD=38.69;ReadPosRankSum=2.428;VQSLOD=5.2142;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,41:44:99:1596,114,0	0/0:9,0:9:24.07:0,24,288	0/0:22,0:22:63.15:0,63,722	0/0:28,0:29:69.21:0,69,816	0/0:19,0:19:51.16:0,51,612	0/0:23,0:23:66.20:0,66,792	0/0:33,0:33:99:0,99,1177	0/0:32,0:32:90.28:0,90,1079	0/0:28,0:28:72.22:0,72,863	0/0:18,0:18:45.14:0,45,539	0/0:13,0:13:39.12:0,39,468	0/0:35,0:35:99:0,105,1260	1/1:2,18:20:57.19:794,57,0	0/0:28,0:28:81.25:0,81,971	0/0:29,0:29:87.25:0,87,1033	0/0:25,0:25:72.21:0,72,853	0/0:50,0:50:99:0,147,1762	1/1:1,14:15:42.14:588,42,0	0/0:17,0:17:48.15:0,48,576	0/0:22,0:22:66.20:0,66,790	0/0:45,0:45:99:0,129,1547	0/0:16,0:16:48.15:0,48,575	1/1:1,21:22:60.20:830,60,0	1/1:1,37:38:99:1512,108,0	0/0:26,0:26:75.23:0,75,900	1/1:1,25:27:81.24:1104,81,0	0/0:19,0:19:57.16:0,57,673	1/1:0,12:12:33.11:462,33,0
chr10	70636031	.	T	TC	512.85	PASS	AB=0.920;AC=9;AF=0.161;AN=56;BaseQRankSum=3.030;DP=610;FS=9.750;HRun=10;HaplotypeScore=80.7831;InbreedingCoeff=0.6329;MQ=79.08;MQ0=8;MQRankSum=0.552;QD=4.07;ReadPosRankSum=-0.521;VQSLOD=0.1361;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:39:66.46:0,66,719	0/1:7,2:9:0.87:1,0,146	0/1:51,0:30:2.67:3,0,159	0/0:43,0:26:13.10:0,13,154	0/0:23,0:23:5.42:0,5,337	0/0:23,0:23:56.74:0,57,448	0/0:19,0:19:35.64:0,36,351	0/0:27,0:26:39.76:0,40,313	0/0:16,0:16:38.86:0,39,305	0/0:15,0:15:29.87:0,30,231	0/0:12,1:13:7.98:0,8,173	0/0:19,0:19:39.68:0,40,309	1/1:2,8:11:21:211,21,0	0/0:21,0:21:43.46:0,43,402	0/0:26,0:26:65.80:0,66,523	0/0:20,0:20:56.87:0,57,454	0/0:24,0:24:50.40:0,50,413	0/0:2,0:23:31.80:0,32,92	0/0:16,0:16:26.37:0,26,223	0/1:15,1:16:6.42:6,0,108	0/0:20,0:20:33.11:0,33,295	0/0:13,0:13:6.53:0,7,196	1/1:3,10:13:15.02:152,15,0	1/1:7,16:26:27.06:284,27,0	0/0:19,0:18:38.57:0,39,313	0/0:32,0:32:70.82:0,71,564	0/0:20,0:20:39.64:0,40,343	0/0:11,0:11:16.56:0,17,137
chr10	70637990	.	A	AAGACT	1195.91	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.568;DP=694;FS=0.000;HRun=0;HaplotypeScore=128.2190;InbreedingCoeff=0.9952;MQ=79.81;MQ0=0;MQRankSum=-5.959;QD=49.83;ReadPosRankSum=1.093;VQSLOD=3.7085;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.29:0,84,1691	0/0:9,0:9:21.07:0,21,426	0/0:19,0:19:42.10:0,42,713	0/0:15,0:15:30.10:0,30,589	0/0:19,0:19:51.18:0,51,1031	0/0:29,0:29:84.25:0,84,1634	0/0:36,0:36:96.32:0,96,1912	0/0:39,0:39:93.29:0,93,1762	0/0:37,0:37:87.27:0,87,1670	0/0:32,0:32:96.32:0,96,1885	0/0:22,0:22:60.20:0,60,1184	0/0:18,0:18:54.16:0,54,1014	0/0:24,0:24:66.23:0,66,1327	0/0:28,0:28:84.29:0,84,1704	0/0:25,0:25:72.23:0,72,1416	0/0:32,0:32:93.32:0,93,1846	0/0:29,0:29:81.26:0,81,1604	1/1:7,16:24:45.11:1291,45,0	0/0:23,0:23:66.22:0,66,1304	0/0:22,0:22:61.43:0,61,1174	0/0:26,0:26:72.20:0,72,1346	0/0:28,0:28:81.28:0,81,1635	0/0:20,0:20:57.18:0,57,1121	0/0:32,0:32:84.27:0,84,1670	0/0:25,0:25:69.24:0,69,1394	0/0:22,0:22:54.17:0,54,1024	0/0:15,0:15:39.13:0,39,777	0/0:12,0:12:36.12:0,36,731
chr10	70646091	.	TG	T	2554.50	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.415;DP=727;FS=3.457;HRun=3;HaplotypeScore=70.1489;InbreedingCoeff=0.9956;MQ=84.77;MQ0=0;MQRankSum=-1.936;QD=31.54;ReadPosRankSum=2.964;VQSLOD=3.9167;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,1769	0/0:7,0:7:18.06:0,18,258	0/0:22,0:22:63.19:0,63,845	0/0:23,0:23:56.86:0,57,799	0/0:24,0:24:72.21:0,72,997	0/0:22,0:22:60.20:0,60,864	0/0:30,0:30:90.20:0,90,1202	0/0:50,0:50:99:0,135,1855	0/0:34,0:34:93.29:0,93,1301	0/0:25,0:25:63.19:0,63,847	0/0:9,0:9:21.07:0,21,302	0/0:33,0:33:93.31:0,93,1338	1/1:0,35:35:99:1210,99,0	0/0:33,0:33:87.29:0,87,1252	0/0:39,0:39:99:0,114,1588	0/0:35,0:35:99:0,105,1495	0/0:27,0:27:75.25:0,75,1080	0/0:18,0:18:51.16:0,51,716	0/0:18,0:18:51.16:0,51,716	0/0:13,0:13:33.09:0,33,450	0/0:47,0:47:99:0,132,1866	0/0:15,0:15:42.14:0,42,603	1/1:0,16:16:42.13:521,42,0	1/1:2,28:30:78.24:967,78,0	0/0:18,0:18:51.16:0,51,715	0/0:21,0:21:54.17:0,54,759	0/0:22,0:22:66.22:0,66,950	0/0:18,0:18:54.18:0,54,778
chr10	70647551	.	ATG	A	919.37	PASS	AB=0.889;AC=17;AF=0.304;AN=56;BaseQRankSum=7.155;DP=737;FS=7.865;HRun=0;HaplotypeScore=105.1007;InbreedingCoeff=-0.3799;MQ=64.75;MQ0=18;MQRankSum=0.883;QD=2.22;ReadPosRankSum=1.376;VQSLOD=1.2898;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:5.96:0,6,44	0/1:11,3:14:72.74:73,0,317	0/0:64,1:25:27.03:0,27,371	0/0:67,1:29:11.68:0,12,159	0/1:26,2:28:45.11:45,0,689	0/0:10,0:12:21.06:0,21,310	0/1:21,2:23:20.59:21,0,675	0/1:21,2:24:28.56:29,0,480	0/1:15,1:16:2.26:2,0,440	0/1:23,2:25:89.11:89,0,475	0/1:21,0:21:0.65:1,0,436	0/1:24,2:25:26.99:27,0,472	0/1:17,2:19:22.54:23,0,576	0/1:15,3:18:66.68:67,0,404	0/0:18,0:18:42.11:0,42,616	0/0:14,2:16:24.07:0,24,356	0/0:36,3:39:16.60:0,17,1149	0/1:9,8:17:2.96:279,0,3	0/0:19,0:19:27.08:0,27,400	0/0:16,0:17:33.08:0,33,471	0/1:59,7:65:99:150,0,1411	0/1:11,1:12:5.25:5,0,390	0/0:21,1:22:0.54:0,1,437	0/1:34,3:36:39.81:40,0,829	0/1:18,5:23:84.20:84,0,601	0/1:17,4:22:99:113,0,357	0/1:21,3:24:22.51:23,0,614	0/0:14,0:14:33.09:0,33,476
chr10	70647583	.	AGT	A	1895.43	PASS	AB=0.831;AC=44;AF=0.880;AN=50;BaseQRankSum=0.158;DP=730;FS=4.302;HRun=0;HaplotypeScore=98.2089;InbreedingCoeff=0.2686;MQ=47.70;MQ0=47;MQRankSum=1.016;QD=3.72;ReadPosRankSum=1.392;VQSLOD=1.9023;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:7,5:12:15.51:163,16,0	./.	./.	1/1:16,4:20:8.87:97,9,0	1/1:10,0:15:8.52:42,9,0	1/1:25,6:31:12.03:130,12,0	1/1:25,0:25:4.19:39,4,0	0/0:17,0:17:5.99:0,6,48	1/1:23,3:25:9.02:97,9,0	1/1:13,2:15:9.02:98,9,0	1/1:11,6:18:17.71:157,18,0	1/1:14,0:15:2.64:14,3,0	1/1:15,1:18:6.01:65,6,0	1/1:15,1:18:11.70:93,12,0	1/1:13,5:18:12.02:123,12,0	1/1:29,7:42:43.68:360,44,0	0/1:11,0:15:3.91:8,0,4	1/1:14,2:15:9:88,9,0	1/1:11,3:14:3.01:33,3,0	0/1:58,9:65:17.52:214,0,18	1/1:12,0:12:3:29,3,0	1/1:13,0:15:2.84:14,3,0	1/1:28,0:36:2.70:14,3,0	1/1:18,1:20:5.85:47,6,0	0/0:20,0:20:9.03:0,9,131	1/1:21,3:25:8.85:79,9,0	1/1:8,0:9:2.84:14,3,0
chr10	70648572	.	C	CCA	273.47	PASS	AB=0.667;AC=5;AF=0.109;AN=46;BaseQRankSum=2.121;DP=83;FS=2.941;HRun=0;HaplotypeScore=20.2583;InbreedingCoeff=0.2888;MQ=121.37;MQ0=0;MQRankSum=-1.334;QD=17.09;ReadPosRankSum=-2.563;VQSLOD=2.7444;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,5:9:20.94:273,21,0	0/0:1,0:1:3.01:0,3,42	0/0:11,0:9:13.30:0,13,132	0/0:13,0:10:5.07:0,5,75	./.	0/0:2,0:2:6.01:0,6,68	0/0:4,0:4:12.04:0,12,169	0/0:4,0:4:9.02:0,9,112	0/0:1,0:1:3.01:0,3,42	0/0:4,0:4:6.01:0,6,71	0/0:2,0:2:6.02:0,6,85	./.	0/1:2,2:4:16.02:46,0,16	0/0:1,0:1:3.01:0,3,42	0/0:2,0:2:6.02:0,6,85	0/0:1,0:1:3.01:0,3,42	0/0:3,0:3:9.03:0,9,127	./.	0/0:3,0:3:9.03:0,9,127	0/0:1,0:1:3.01:0,3,42	0/0:6,0:6:15.05:0,15,212	0/0:2,0:2:3.01:0,3,42	./.	1/1:3,0:3:6:65,6,0	0/0:4,0:4:9.02:0,9,111	0/0:1,0:1:0:0,0,0	0/0:1,0:1:3.01:0,3,42	./.
chr10	70648620	.	A	AT	369.84	PASS	AB=0.927;AC=8;AF=0.167;AN=48;BaseQRankSum=0.736;DP=151;FS=13.652;HRun=9;HaplotypeScore=29.0649;InbreedingCoeff=0.3164;MQ=87.88;MQ0=3;MQRankSum=-0.386;QD=7.25;ReadPosRankSum=2.263;VQSLOD=-0.0369;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:13:38.77:393,39,0	./.	0/1:22,0:14:19.85:20,0,130	0/0:15,0:9:9.85:0,10,81	0/0:4,0:4:12:0,12,104	./.	0/1:6,0:6:1.71:2,0,112	0/0:7,0:7:8.85:0,9,74	0/0:4,0:4:12:0,12,104	0/0:3,0:3:5.99:0,6,52	0/0:4,0:4:5.60:0,6,52	0/0:4,0:4:2.38:0,2,67	0/0:2,0:2:3.47:0,3,27	0/0:5,0:5:12:0,12,104	0/0:1,0:1:3:0,3,26	./.	0/0:8,0:8:23.95:0,24,201	0/0:9,0:8:9.84:0,10,101	0/0:9,0:9:20.88:0,21,171	0/0:4,0:4:12:0,12,104	0/1:2,1:3:24.18:24,0,43	0/0:5,0:5:14.97:0,15,125	0/1:2,0:2:0:0,0,0	0/0:2,0:3:5.04:0,5,32	0/0:6,0:6:17.99:0,18,155	1/1:3,0:3:8.80:53,9,0	0/0:7,0:7:17.99:0,18,156	./.
chr10	70648628	.	TTC	T	71.61	PASS	AB=1.000;AC=6;AF=0.120;AN=50;BaseQRankSum=3.030;DP=188;FS=7.748;HRun=0;HaplotypeScore=31.0985;InbreedingCoeff=0.2210;MQ=74.62;MQ0=10;MQRankSum=-0.755;QD=2.11;ReadPosRankSum=-1.451;VQSLOD=-0.2965;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:14:8.19:8,0,144	./.	0/0:21,0:13:20.14:0,20,307	0/0:20,0:8:11.56:0,12,138	0/0:6,0:6:15.03:0,15,231	./.	0/0:7,0:7:17.71:0,18,290	0/0:8,0:8:14.95:0,15,172	0/0:6,0:6:17.98:0,18,250	0/0:4,0:4:11.95:0,12,149	0/1:4,0:4:0.91:1,0,93	0/1:6,0:5:3.23:3,0,123	0/1:3,0:3:9.44:9,0,67	0/0:6,0:6:15.04:0,15,229	0/0:1,0:1:3.01:0,3,52	0/0:3,0:3:8.99:0,9,74	0/0:8,0:8:24.08:0,24,412	0/0:15,0:12:16.58:0,17,260	0/0:10,0:10:21.22:0,21,346	0/0:5,0:5:15.04:0,15,228	0/0:3,0:3:8.39:0,8,112	0/0:6,0:6:15.04:0,15,231	0/0:5,0:5:13.76:0,14,121	0/0:5,0:5:11.44:0,11,101	0/0:7,0:6:18.06:0,18,310	1/1:0,4:4:12.03:152,12,0	0/0:8,0:8:24.06:0,24,349	./.
chr10	70651380	.	TA	T	4249.75	PASS	AB=0.532;AC=13;AF=0.232;AN=56;BaseQRankSum=14.156;DP=719;FS=1.098;HRun=7;HaplotypeScore=75.2525;InbreedingCoeff=0.9015;MQ=84.33;MQ0=0;MQRankSum=-1.359;QD=26.23;ReadPosRankSum=3.378;VQSLOD=5.5353;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,34:38:93.20:949,93,0	0/0:9,0:9:27.09:0,27,339	0/0:22,0:22:57.17:0,57,692	0/0:29,0:29:32.61:0,33,583	0/0:29,0:29:78.25:0,78,981	0/0:32,0:32:90.29:0,90,1132	0/0:36,0:36:90.29:0,90,1131	0/0:32,0:32:87.23:0,87,1054	0/0:21,0:21:60.17:0,60,729	0/0:37,0:37:96.30:0,96,1198	0/0:31,0:31:87.28:0,87,1094	0/0:25,0:25:75.20:0,75,926	1/1:1,24:25:72.16:735,72,0	0/0:22,0:22:66.19:0,66,796	0/0:27,0:27:72.20:0,72,879	0/0:25,0:24:66.21:0,66,830	0/0:26,0:26:72.19:0,72,888	1/1:0,21:21:60.14:612,60,0	0/0:23,0:23:57.18:0,57,717	0/0:23,0:23:66.21:0,66,830	0/0:24,0:24:66.18:0,66,802	0/0:26,0:26:72.19:0,72,884	1/1:4,16:20:45.10:459,45,0	1/1:2,13:14:39.08:398,39,0	0/0:24,0:24:66.19:0,66,815	0/1:4,29:33:17.01:791,0,17	0/0:34,0:33:99:0,102,1266	1/1:0,10:10:30.07:306,30,0
chr10	70652153	.	T	TACTC	6493.80	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.288;DP=638;FS=2.014;HRun=0;HaplotypeScore=105.3599;InbreedingCoeff=0.9974;MQ=81.74;MQ0=0;MQRankSum=-6.143;QD=61.26;ReadPosRankSum=3.238;VQSLOD=6.9810;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,43:46:82.41:2727,82,0	0/0:7,0:7:18.03:0,18,321	0/0:20,0:20:60.14:0,60,1035	0/0:17,0:17:41.35:0,41,723	0/0:23,0:23:63.22:0,63,1249	0/0:21,0:21:57.20:0,57,1127	0/0:18,0:18:48.15:0,48,912	0/0:32,0:32:93.29:0,93,1723	0/0:15,0:15:45.15:0,45,880	0/0:32,0:32:93.31:0,93,1749	0/0:21,0:21:57.19:0,57,1084	0/0:19,0:19:57.20:0,57,1130	1/1:0,9:9:24.08:669,24,0	0/0:20,0:20:60.21:0,60,1177	0/0:31,0:31:90.28:0,90,1655	0/0:36,0:36:99:0,108,2069	0/0:35,0:35:99:0,102,2001	1/1:1,11:13:27.09:753,27,0	0/0:21,0:21:60.18:0,60,1113	0/0:19,0:19:54.17:0,54,1035	0/0:29,0:29:84.27:0,84,1588	0/0:17,0:17:48.16:0,48,925	1/1:1,16:20:48.16:1339,48,0	1/1:0,18:18:36.12:1006,36,0	0/0:20,0:20:60.15:0,60,1084	0/0:28,0:27:75.23:0,75,1389	0/0:33,0:32:99:0,99,1791	0/0:18,0:18:54.12:0,54,958
chr10	70654216	.	CAG	C	203.34	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.453;DP=576;FS=3.823;HRun=0;HaplotypeScore=99.8608;InbreedingCoeff=0.9523;MQ=67.27;MQ0=9;MQRankSum=-5.150;QD=11.96;ReadPosRankSum=0.960;VQSLOD=3.4349;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:56.85:0,57,778	0/0:12,0:12:36.11:0,36,653	0/0:28,0:21:56.49:0,56,798	0/0:41,0:31:69.22:0,69,1108	0/0:25,0:23:51.13:0,51,851	0/0:13,0:13:36.12:0,36,682	0/0:29,0:29:84.25:0,84,1527	0/0:27,0:27:78.18:0,78,1332	0/0:35,0:34:90.29:0,90,1630	0/0:20,0:19:54.17:0,54,964	0/0:14,0:14:18.06:0,18,338	0/0:18,0:18:45.14:0,45,793	0/0:20,1:19:41.52:0,42,630	0/0:14,0:14:36.12:0,36,654	0/0:22,0:22:57.17:0,57,1008	0/0:22,0:22:63.20:0,63,1158	0/0:21,0:21:63.22:0,63,1185	0/0:13,0:11:30.10:0,30,568	0/0:16,0:15:44.77:0,45,617	0/0:15,0:15:36.11:0,36,639	0/0:31,0:31:51.21:0,51,1142	0/0:19,0:19:48.12:0,48,812	0/0:12,0:12:33.11:0,33,577	0/0:31,0:30:42.13:0,42,641	0/0:12,0:12:33.11:0,33,628	1/1:9,4:14:13.62:207,14,0	0/0:14,0:14:36.08:0,36,583	1/1:0,3:3:9.03:106,9,0
chr10	70654222	.	CAG	C	217.51	PASS	AB=0.762;AC=3;AF=0.054;AN=56;BaseQRankSum=6.061;DP=572;FS=7.596;HRun=0;HaplotypeScore=98.4451;InbreedingCoeff=0.6720;MQ=61.66;MQ0=15;MQRankSum=-5.452;QD=11.45;ReadPosRankSum=1.383;VQSLOD=2.7892;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,2:31:50.77:0,51,479	0/0:11,0:11:33.11:0,33,610	0/0:23,0:17:36.11:0,36,527	0/0:33,0:23:47.75:0,48,751	0/0:25,0:23:51.14:0,51,901	0/0:14,0:14:39.13:0,39,741	0/0:29,0:29:81.23:0,81,1455	0/0:28,0:28:76.67:0,77,1334	0/0:37,0:34:89.79:0,90,1571	0/0:20,0:19:56.83:0,57,972	0/0:14,0:14:18.06:0,18,336	0/0:17,0:17:39.13:0,39,742	0/0:19,1:18:40.37:0,40,592	0/0:13,0:13:33.11:0,33,621	0/0:22,0:22:54.16:0,54,968	0/0:21,0:21:60.04:0,60,1089	0/0:22,0:22:66.16:0,66,1117	0/0:12,0:10:30.10:0,30,547	0/0:16,0:15:39.71:0,40,580	0/0:17,0:17:39.11:0,39,674	0/0:31,0:30:63.18:0,63,1086	0/0:19,0:18:39.13:0,39,731	0/0:18,0:18:30.08:0,30,494	0/0:31,0:30:42.11:0,42,597	0/0:14,0:14:39.12:0,39,691	0/1:11,4:15:6.70:208,0,7	0/0:11,1:12:26.94:0,27,507	1/1:3,0:3:9.03:107,9,0
chr10	70654228	.	CAG	C	444.25	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.937;DP=561;FS=7.621;HRun=0;HaplotypeScore=94.5290;InbreedingCoeff=0.8823;MQ=55.29;MQ0=20;MQRankSum=-5.289;QD=7.93;ReadPosRankSum=-0.687;VQSLOD=2.6380;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:28,2:27:26.89:213,27,0	0/0:13,0:13:29.92:0,30,529	0/0:12,0:7:11.92:0,12,123	0/0:25,0:19:38.46:0,38,504	0/0:26,0:24:48.16:0,48,914	0/0:14,0:14:39.12:0,39,706	0/0:30,0:30:75.16:0,75,1262	0/0:31,0:29:70.21:0,70,1321	0/0:35,0:31:76.05:0,76,1368	0/0:18,0:17:51.13:0,51,884	0/0:16,0:16:18.05:0,18,304	0/0:17,0:17:39.08:0,39,686	0/0:21,1:19:31.91:0,32,263	0/0:14,0:14:30.10:0,30,563	0/0:21,0:21:51.16:0,51,904	0/0:21,0:21:54.17:0,54,997	0/0:21,0:21:51.17:0,51,943	0/0:13,0:10:24.08:0,24,455	0/0:17,0:16:45.12:0,45,480	0/0:16,0:16:39.07:0,39,666	0/0:29,0:28:54.16:0,54,977	0/0:20,0:18:36.10:0,36,620	0/0:12,3:15:23.74:0,24,308	0/0:30,1:29:35.88:0,36,348	0/0:14,0:14:39.13:0,39,733	1/1:19,3:21:2.01:250,2,0	0/0:13,0:13:22.61:0,23,508	1/1:4,0:3:9.03:107,9,0
chr10	70654234	.	CAG	C	884.59	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=11.140;DP=546;FS=12.881;HRun=0;HaplotypeScore=90.4885;InbreedingCoeff=0.7702;MQ=50.61;MQ0=21;MQRankSum=-3.305;QD=5.53;ReadPosRankSum=-1.204;VQSLOD=1.9378;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:28:26.90:213,27,0	0/0:13,0:13:8.50:0,8,280	0/0:7,0:3:5.88:0,6,37	0/1:14,0:12:2.52:3,0,58	0/0:25,1:24:48.09:0,48,750	0/0:13,0:13:33.01:0,33,431	0/0:26,0:26:31.85:0,32,545	0/0:34,0:32:72.25:0,72,675	0/0:32,0:28:58.44:0,58,920	0/0:18,0:17:32.14:0,32,348	0/0:17,0:17:11.99:0,12,138	0/0:18,0:18:34.09:0,34,441	1/1:17,3:17:16.81:137,17,0	0/0:12,1:13:29.91:0,30,315	0/0:23,0:22:16.16:0,16,529	0/0:21,0:21:54.08:0,54,684	0/0:20,0:20:50.50:0,50,600	0/0:12,0:9:23.01:0,23,191	0/1:19,0:19:35.25:35,0,170	0/0:16,0:16:36.05:0,36,550	0/0:28,0:27:33.01:0,33,516	0/0:19,0:17:29.07:0,29,253	1/1:18,0:18:6.84:45,7,0	1/1:28,3:29:27.66:195,28,0	0/0:15,0:15:36.07:0,36,538	1/1:22,0:21:46.57:332,47,0	0/0:15,0:15:17.92:0,18,452	1/1:4,0:3:9.03:107,9,0
chr10	70654236	.	GAC	G	160.20	PASS	AB=0.979;AC=10;AF=0.192;AN=52;BaseQRankSum=3.106;DP=533;FS=0.000;HRun=0;HaplotypeScore=94.4160;InbreedingCoeff=0.0366;MQ=49.85;MQ0=21;MQRankSum=-3.479;QD=0.83;ReadPosRankSum=0.615;VQSLOD=1.4124;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:30:0.01:0,0,0	0/0:13,0:13:16.39:0,16,126	./.	./.	0/0:23,3:25:42.09:0,42,558	0/0:12,0:12:20.68:0,21,219	0/1:24,0:24:2.54:3,0,211	0/1:31,2:31:17.33:17,0,278	0/0:30,2:28:9.91:0,10,542	0/1:17,1:17:39.02:103,0,39	0/0:16,0:16:5.96:0,6,43	0/0:17,0:17:9.56:0,10,257	0/0:21,0:18:4.23:0,4,88	0/0:10,0:10:9.02:0,9,115	0/1:22,0:21:26.48:26,0,319	0/0:22,0:22:32.05:0,32,355	0/0:19,0:19:26.22:0,26,321	0/0:12,0:9:5.93:0,6,40	0/1:16,0:17:53.98:54,0,141	0/0:13,0:14:30.08:0,30,409	0/0:27,0:26:20.51:0,21,245	0/1:19,0:17:3.92:4,0,40	0/0:17,0:17:11.96:0,12,94	0/0:30,0:29:11.84:0,12,84	0/0:14,0:14:24.08:0,24,366	0/1:23,0:22:27.71:28,0,31	0/0:16,1:17:8.40:0,8,356	1/1:4,0:3:8.81:53,9,0
chr10	70654276	.	GAC	G	945.24	PASS	AB=0.976;AC=24;AF=0.462;AN=52;BaseQRankSum=6.617;DP=530;FS=35.853;HRun=0;HaplotypeScore=91.3358;InbreedingCoeff=0.0745;MQ=44.14;MQ0=22;MQRankSum=-1.595;QD=2.68;ReadPosRankSum=0.526;VQSLOD=0.1144;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:30:0.01:0,0,0	0/1:10,0:9:4.22:4,0,65	./.	./.	0/0:29,0:28:20.43:0,20,272	0/1:13,0:12:33.18:33,0,73	0/1:27,0:26:7.25:7,0,173	0/0:23,0:22:32.42:0,32,292	0/0:22,0:19:17.41:0,17,250	0/1:22,0:22:0.99:1,0,222	0/0:23,0:23:20.80:0,21,179	0/1:22,0:22:60.46:60,0,92	1/1:21,0:17:17.74:80,18,0	0/1:15,0:15:28.04:89,0,28	0/1:23,1:23:7.40:7,0,324	0/0:16,5:21:31.05:0,31,297	0/1:25,0:23:57.54:58,0,113	1/1:13,0:10:4.53:21,5,0	0/1:14,7:20:99:164,0,134	0/0:16,5:21:15.60:0,16,122	0/1:30,0:29:47.64:217,0,48	0/1:17,0:17:36.06:41,0,36	1/1:16,0:16:2.98:22,3,0	1/1:23,0:21:2.99:23,3,0	0/0:16,0:16:1.71:0,2,151	1/1:15,0:14:31.78:200,32,0	0/0:13,9:22:15.47:0,15,182	1/1:6,0:4:11.84:78,12,0
chr10	70654278	.	CAGAGAGAGAGAGAGAGAGAG	C	651.29	PASS	AB=0.767;AC=4;AF=0.083;AN=48;BaseQRankSum=3.799;DP=539;FS=7.517;HRun=0;HaplotypeScore=205.8479;InbreedingCoeff=0.4910;MQ=44.45;MQ0=22;MQRankSum=-3.071;QD=11.43;ReadPosRankSum=2.334;VQSLOD=1.7034;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:31:0.94:0,1,1	0/0:13,0:12:17.25:0,17,754	./.	./.	0/0:31,0:30:33.11:0,33,1904	0/0:12,0:12:15.05:0,15,1093	0/0:24,0:27:18.06:0,18,1160	0/0:24,0:24:32.14:0,32,1097	0/0:21,0:18:15.78:0,16,674	0/0:23,0:23:57.19:0,57,3508	0/0:21,0:21:18.06:0,18,1472	0/0:22,0:22:12.04:0,12,747	1/1:16,5:17:5.61:315,6,0	0/0:15,0:15:12.98:0,13,707	0/0:26,0:26:36.12:0,36,2421	0/0:21,0:21:18.06:0,18,1458	0/0:24,0:22:41.12:0,41,2210	0/0:6,0:10:10.55:0,11,280	0/0:20,0:19:36.12:0,36,2220	0/0:21,0:21:24:0,24,806	0/0:30,0:29:30.10:0,30,1593	0/0:17,0:17:9.03:0,9,562	./.	0/1:13,9:20:0:0,0,0	0/0:20,0:20:24.55:0,25,1322	0/1:11,0:13:99:428,0,201	0/0:21,0:22:12.93:0,13,759	./.
chr10	70657259	.	TAC	T	781.85	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.754;DP=1309;FS=2.466;HRun=0;HaplotypeScore=178.3070;InbreedingCoeff=0.9969;MQ=60.48;MQ0=2;MQRankSum=-1.509;QD=25.22;ReadPosRankSum=1.594;VQSLOD=4.5351;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:74.95:0,75,1260	0/0:19,0:19:54.17:0,54,884	0/0:44,0:36:98.98:0,99,1476	0/0:54,0:44:87.88:0,88,1344	0/0:38,0:38:99:0,102,1721	0/0:39,0:39:99:0,99,1592	0/0:46,0:46:99:0,126,2030	0/0:85,0:85:99:0,196,3398	0/0:61,0:61:99:0,121,2514	0/0:71,0:71:99:0,193,3157	0/0:20,0:20:48.16:0,48,813	0/0:61,0:61:99:0,166,2730	0/0:57,0:57:99:0,150,2509	0/0:56,0:56:99:0,153,2450	0/0:69,0:69:99:0,186,3067	0/0:71,0:71:99:0,193,3136	0/0:34,0:34:84.28:0,84,1393	1/1:8,23:30:22.81:875,23,0	0/0:14,0:14:36.12:0,36,609	0/0:58,0:58:99:0,153,2480	0/0:58,0:58:99:0,138,2253	0/0:47,0:47:99:0,135,2278	0/0:32,0:32:84.25:0,84,1362	0/0:39,0:39:93.32:0,93,1567	0/0:32,0:32:87.28:0,87,1442	0/0:74,0:74:99:0,208,3455	0/0:49,0:49:99:0,100,2028	0/0:12,0:12:33.11:0,33,545
chr10	70657500	.	A	AAC	7478.01	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-6.794;DP=1229;FS=2.214;HRun=0;HaplotypeScore=172.4368;InbreedingCoeff=0.9915;MQ=60.09;MQ0=3;MQRankSum=-1.840;QD=34.78;ReadPosRankSum=1.996;VQSLOD=6.3689;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,29:47:99:1575,101,0	0/0:14,0:14:37.46:0,37,516	0/0:52,0:45:98.97:0,99,1368	0/0:37,0:33:88.83:0,89,1088	0/0:35,0:35:99:0,99,1317	0/0:30,0:31:76.42:0,76,961	0/0:24,0:24:56.48:0,56,722	0/0:58,0:58:99:0,147,1900	0/0:67,0:67:99:0,180,2313	0/0:74,0:74:99:0,187,2449	0/0:32,0:32:84.27:0,84,1104	0/0:58,0:58:99:0,162,2142	1/1:4,41:45:93.18:1604,93,0	0/0:39,0:39:99:0,105,1397	0/0:58,0:58:99:0,172,2257	0/0:59,0:59:99:0,162,2119	0/0:28,0:28:11.23:0,11,575	1/1:18,25:40:81.73:1475,82,0	0/0:17,0:17:45.14:0,45,577	0/0:55,0:55:99:0,150,1935	0/0:46,0:45:99:0,117,1508	0/0:50,0:50:99:0,141,1844	1/1:3,38:42:96.33:1647,96,0	1/1:2,36:38:69.23:1178,69,0	0/0:46,0:46:99:0,120,1544	0/0:72,0:72:99:0,180,2353	0/0:41,0:41:99:0,108,1438	0/0:20,0:20:60.20:0,60,798
chr10	70658199	.	A	ACTTTGCAGCATTAGCAATTCATATA	60086.06	PASS	AB=0.737;AC=54;AF=0.964;AN=56;BaseQRankSum=-5.613;DP=374;FS=6.555;HRun=0;HaplotypeScore=426.7390;InbreedingCoeff=-0.0302;MQ=68.32;MQ0=0;MQRankSum=-1.664;QD=160.66;ReadPosRankSum=0.413;VQSLOD=3.7439;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:45.15:2095,45,0	1/1:13,0:13:11.07:1586,11,0	0/1:8,0:11:0.24:1792,0,0	0/1:6,1:11:10.23:1449,0,10	1/1:15,0:15:34.76:1626,35,0	1/1:10,0:10:30.10:1520,30,0	1/1:9,0:9:21.07:988,21,0	1/1:14,0:14:39.13:3189,39,0	1/1:14,0:14:36.12:2760,36,0	1/1:15,0:15:39.07:2614,39,0	1/1:9,0:9:25.33:1598,25,0	1/1:23,0:23:67.10:4483,67,0	1/1:17,0:17:24.65:2280,25,0	1/1:21,0:21:43.22:2571,43,0	1/1:17,0:17:48.16:3429,48,0	1/1:19,0:19:41.64:3132,42,0	1/1:8,0:8:15.04:937,15,0	1/1:8,0:8:14.78:486,15,0	1/1:10,0:10:27.08:1566,27,0	1/1:17,0:17:44.59:2891,45,0	1/1:10,0:10:20.94:618,21,0	1/1:7,0:7:21.07:1610,21,0	1/1:7,0:7:18.53:1197,19,0	1/1:13,0:13:19.77:1906,20,0	1/1:10,0:10:22.16:2282,22,0	1/1:23,0:23:66.01:4675,66,0	1/1:20,0:20:35.73:3478,36,0	1/1:6,0:6:18.06:1330,18,0
chr10	70658200	.	C	CTTTGCAGCATTAGCAATTCATAT	3761.27	PASS	AB=0.694;AC=26;AF=0.929;AN=28;BaseQRankSum=-2.075;DP=37;FS=2.663;HRun=0;HaplotypeScore=35.7011;InbreedingCoeff=-0.2166;MQ=179.86;MQ0=0;MQRankSum=-0.415;QD=110.63;ReadPosRankSum=0.264;VQSLOD=3.0380;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:1:3.01:61,3,0	./.	0/1:4,0:11:0.24:1775,0,0	0/1:5,1:7:16.25:875,0,16	1/1:0,0:1:3.01:138,3,0	1/1:1,0:1:3.01:52,3,0	./.	./.	./.	./.	1/1:1,0:1:3.01:77,3,0	./.	./.	1/1:1,0:3:9.02:143,9,0	1/1:1,0:2:6.02:98,6,0	1/1:1,0:1:3:25,3,0	./.	1/1:0,0:1:3.01:38,3,0	1/1:1,0:1:3.01:76,3,0	./.	1/1:0,0:1:3.01:97,3,0	./.	./.	./.	./.	1/1:0,0:2:6.02:248,6,0	1/1:0,0:1:3.01:59,3,0	./.
chr10	70659233	.	GCA	G	705.31	PASS	AB=0.907;AC=25;AF=0.481;AN=52;BaseQRankSum=5.490;DP=620;FS=13.873;HRun=0;HaplotypeScore=107.3252;InbreedingCoeff=-0.0734;MQ=64.40;MQ0=8;MQRankSum=-0.752;QD=1.67;ReadPosRankSum=0.182;VQSLOD=0.9300;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:38:1.55:4,2,0	0/0:10,0:9:1.96:0,2,31	./.	./.	0/0:16,0:19:11.99:0,12,117	0/1:18,1:20:36.64:37,0,82	0/1:25,6:31:99:119,0,330	0/0:16,0:15:2.92:0,3,17	0/1:18,2:20:11.17:11,0,220	0/0:25,0:25:20.97:0,21,241	0/1:14,0:14:32.74:49,0,33	0/1:24,1:25:39.73:40,0,88	1/1:12,0:16:11.76:46,12,0	1/1:15,10:25:2.21:127,2,0	0/0:29,0:29:33.04:0,33,403	0/1:12,1:15:22.30:22,0,217	0/1:23,2:25:48.44:48,0,216	0/0:14,0:14:16.64:0,17,152	0/1:13,4:17:17.40:52,0,17	0/1:21,2:23:43.45:43,0,175	0/1:57,0:55:30.60:31,0,375	0/1:17,3:19:11.19:11,0,208	1/1:7,0:15:8.89:77,9,0	1/1:24,0:28:4.88:27,5,0	0/0:20,0:24:43.46:0,43,373	1/1:18,8:26:0.86:85,1,0	0/0:15,0:16:3.90:0,4,137	1/1:5,0:5:3.01:32,3,0
chr10	70660219	.	G	GTGTT	898.61	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.649;DP=756;FS=0.953;HRun=0;HaplotypeScore=136.2092;InbreedingCoeff=0.9725;MQ=71.92;MQ0=8;MQRankSum=-0.498;QD=28.08;ReadPosRankSum=0.183;VQSLOD=3.6244;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,115,1792	0/0:10,0:10:15:0,15,210	0/0:40,0:28:15:0,15,195	0/0:33,0:29:24.06:0,24,320	0/0:22,0:23:45.13:0,45,671	0/0:23,0:23:39.12:0,39,598	0/0:36,0:36:57.17:0,57,864	0/0:36,0:36:51.14:0,51,711	0/0:30,0:30:54.12:0,54,807	0/0:33,0:33:66.20:0,66,990	0/0:16,0:17:36.12:0,36,555	0/0:12,0:12:27.04:0,27,378	0/0:18,0:18:45.14:0,45,689	0/0:21,0:21:54.18:0,54,862	0/0:20,0:20:48.12:0,48,717	0/0:27,0:27:48.13:0,48,719	0/0:27,0:27:48.16:0,48,764	0/0:31,0:31:48.16:0,48,758	0/0:19,0:17:24.08:0,24,383	0/0:21,0:21:45.15:0,45,718	0/0:38,0:38:75.21:0,75,1129	0/0:26,0:27:47.20:0,47,782	0/0:20,0:20:45.13:0,45,668	0/0:45,0:45:87.25:0,87,1360	0/0:26,0:26:51.17:0,51,814	1/1:10,9:20:30.09:657,30,0	0/0:33,0:33:57.19:0,57,910	1/1:4,8:12:15.05:360,15,0
chr10	70661421	.	ACCTTCCTT	A	447.74	PASS	AC=10;AF=0.250;AN=40;BaseQRankSum=-2.443;DP=552;FS=10.518;HRun=0;HaplotypeScore=148.5088;InbreedingCoeff=0.5100;MQ=66.20;MQ0=5;MQRankSum=-0.726;QD=4.71;ReadPosRankSum=0.700;VQSLOD=2.2585;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:2.50:0,2,9	0/0:10,0:10:3.01:0,3,43	./.	./.	1/1:10,2:12:2.97:20,3,0	./.	0/0:31,0:31:2.99:0,3,23	./.	0/0:20,0:21:9:0,9,88	1/1:13,1:14:11.95:189,12,0	./.	1/1:23,5:27:6.02:146,6,0	0/0:24,0:24:5.87:0,6,35	0/0:12,0:13:6:0,6,67	1/1:16,1:17:3.01:57,3,0	0/0:28,0:29:17.69:0,18,128	./.	0/0:11,0:11:2.22:0,2,7	0/0:15,0:15:6.01:0,6,143	0/0:16,0:16:9.02:0,9,112	0/0:32,0:30:2.92:0,3,17	0/0:20,0:20:12.03:0,12,148	./.	0/0:31,0:30:3.01:0,3,30	1/1:24,0:24:9.03:162,9,0	0/0:25,0:25:12:0,12,111	0/0:15,0:14:6.01:0,6,71	./.
chr10	70661469	.	TC	T	495.37	PASS	AB=0.774;AC=5;AF=0.096;AN=52;BaseQRankSum=4.898;DP=393;FS=5.956;HRun=2;HaplotypeScore=69.2088;InbreedingCoeff=0.3016;MQ=50.94;MQ0=19;MQRankSum=-3.339;QD=6.04;ReadPosRankSum=-0.512;VQSLOD=0.3792;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:33.09:0,33,423	0/0:9,0:8:24.06:0,24,306	./.	./.	0/0:6,0:6:14.26:0,14,178	0/0:14,0:13:32.32:0,32,432	0/0:16,0:15:42.12:0,42,572	0/0:22,0:14:39.09:0,39,498	0/0:16,0:16:46.64:0,47,559	0/0:15,0:13:36.99:0,37,485	0/0:5,0:5:15.05:0,15,202	0/0:20,0:19:40.82:0,41,529	1/1:9,5:14:17.79:218,18,0	0/0:16,0:16:46.97:0,47,636	0/0:14,0:14:42.01:0,42,527	0/0:20,0:19:46.81:0,47,569	0/0:16,0:17:43.72:0,44,638	0/0:7,0:7:9.43:0,9,99	0/0:10,0:8:20.78:0,21,293	0/0:3,0:3:9.01:0,9,111	0/0:25,0:23:63.19:0,63,868	0/0:17,0:17:47.97:0,48,574	0/1:13,5:17:99:106,0,220	0/1:21,9:27:99:115,0,233	0/0:17,0:17:51.16:0,51,690	0/1:14,6:20:99:176,0,485	0/0:9,0:9:26.30:0,26,346	0/0:10,0:10:30.10:0,30,420
chr10	70661496	.	TCCTG	T	729.12	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.555;DP=452;FS=42.323;HRun=0;HaplotypeScore=92.6224;InbreedingCoeff=0.8782;MQ=57.49;MQ0=6;MQRankSum=-2.622;QD=10.88;ReadPosRankSum=-0.721;VQSLOD=0.9650;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:30.10:0,30,595	0/0:5,0:5:15.05:0,15,340	0/0:14,0:4:12.04:0,12,275	0/0:17,0:7:14.12:0,14,183	0/0:9,0:9:18.06:0,18,348	0/0:11,0:11:30.10:0,30,620	0/0:19,0:19:36.11:0,36,747	0/0:16,0:16:15.05:0,15,362	0/0:22,0:22:54.19:0,54,1173	0/0:22,0:22:58.43:0,58,1227	0/0:8,0:8:21.07:0,21,464	0/0:21,0:20:42.14:0,42,920	1/1:1,14:15:5.34:58,5,0	0/0:19,0:19:45.15:0,45,950	0/0:20,0:20:54.16:0,54,1176	0/0:26,0:26:63.22:0,63,1378	0/0:14,0:14:34.60:0,35,674	1/1:2,0:5:12.02:136,12,0	0/0:12,0:12:13.29:0,13,281	0/0:2,0:2:3.01:0,3,50	0/0:24,0:24:60.21:0,60,1357	0/0:16,0:16:39.08:0,39,793	1/1:3,13:16:23.91:344,24,0	1/1:8,23:28:20.99:340,21,0	0/0:24,0:23:66.21:0,66,1297	0/0:17,0:17:44.18:0,44,887	0/0:15,0:15:42.05:0,42,796	0/0:16,0:16:48.16:0,48,1068
chr10	70661646	.	CCCCG	C	4845.41	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=1.917;DP=636;FS=5.780;HRun=0;HaplotypeScore=267.3834;InbreedingCoeff=-0.1976;MQ=61.33;MQ0=1;MQRankSum=8.452;QD=8.10;ReadPosRankSum=4.056;VQSLOD=3.1920;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,16:25:54.43:880,54,0	0/1:10,0:10:8.16:24,0,8	0/1:13,0:9:36.53:40,0,37	0/0:19,0:10:2.17:0,2,112	1/1:16,0:16:12.07:99,12,0	0/0:16,0:16:1.56:0,2,19	0/1:22,0:22:8.91:80,0,9	1/1:13,0:13:2.01:67,2,0	0/1:34,0:34:11.67:12,0,27	1/1:27,0:27:39.64:228,40,0	0/1:20,0:20:12.81:13,0,22	0/1:29,0:29:0.77:23,0,1	1/1:11,15:26:75.11:1078,75,0	0/1:29,0:29:1.20:17,0,1	0/1:35,0:35:9.36:16,0,9	0/1:27,0:27:9.62:62,0,10	0/1:24,0:24:13.05:31,0,13	1/1:27,0:27:15.32:127,15,0	1/1:8,0:7:9.06:71,9,0	0/1:19,0:19:7.31:47,0,7	1/1:28,0:28:9.20:47,9,0	0/1:24,0:24:9.16:62,0,9	1/1:4,12:16:42.13:642,42,0	1/1:22,17:38:35.49:852,35,0	0/1:22,0:22:8.05:48,0,8	1/1:41,0:41:16.79:243,17,0	0/1:16,0:15:11.35:27,0,11	0/1:8,0:8:8.38:9,0,8
chr10	70661649	.	CG	C	19452.50	PASS	AB=0.864;AC=54;AF=0.964;AN=56;BaseQRankSum=-5.901;DP=622;FS=8.362;HRun=1;HaplotypeScore=178.0500;InbreedingCoeff=-0.0352;MQ=61.99;MQ0=1;MQRankSum=-1.706;QD=31.27;ReadPosRankSum=1.727;VQSLOD=3.7099;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,3:25:40.52:568,41,0	1/1:0,12:12:30.06:391,30,0	0/1:12,1:8:34.63:35,0,41	0/1:14,5:10:24.48:24,0,77	1/1:0,15:15:39.13:540,39,0	1/1:0,16:16:42.14:583,42,0	1/1:0,21:21:51.17:708,51,0	1/1:0,11:11:33.06:390,33,0	1/1:0,35:35:90.26:1217,90,0	1/1:0,26:26:78.21:1062,78,0	1/1:1,20:21:60.20:827,60,0	1/1:0,29:29:69.18:937,69,0	1/1:17,10:27:78.19:879,78,0	1/1:0,31:31:81.17:1083,81,0	1/1:0,36:36:93.26:1271,93,0	1/1:0,27:27:69.23:954,69,0	1/1:1,23:24:49.87:736,50,0	1/1:2,24:26:66.05:884,66,0	1/1:1,7:7:18.03:215,18,0	1/1:0,18:18:51.17:710,51,0	1/1:1,25:26:40.01:581,40,0	1/1:0,25:25:60.06:795,60,0	1/1:14,1:15:39.09:424,39,0	1/1:30,6:34:11.25:662,11,0	1/1:0,20:20:51.17:699,51,0	1/1:0,37:37:99:1446,108,0	1/1:0,16:15:42.14:580,42,0	1/1:0,6:6:18.06:249,18,0
chr10	70661653	.	CT	C	1551.67	PASS	AB=0.627;AC=7;AF=0.125;AN=56;BaseQRankSum=4.706;DP=646;FS=0.924;HRun=2;HaplotypeScore=247.8924;InbreedingCoeff=0.7894;MQ=62.68;MQ0=1;MQRankSum=-5.670;QD=14.24;ReadPosRankSum=-2.445;VQSLOD=2.3883;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,21:27:15.78:454,16,0	0/0:12,0:12:21.72:0,22,172	0/0:16,0:10:7.36:0,7,79	0/0:24,0:13:9.66:0,10,195	0/0:16,0:16:28.93:0,29,300	0/0:16,0:16:40.95:0,41,328	0/0:23,0:23:46.37:0,46,398	0/0:17,0:17:47.88:0,48,509	0/0:36,0:36:91.25:0,91,888	0/0:26,0:26:49.91:0,50,713	0/0:22,0:22:58.79:0,59,543	0/0:28,0:28:71.75:0,72,752	1/1:9,20:30:40.72:544,41,0	0/0:31,0:31:83.26:0,83,844	0/0:35,0:35:91.55:0,92,907	0/0:26,0:26:53.75:0,54,570	0/0:25,0:25:48.90:0,49,488	0/0:27,0:28:66.22:0,66,742	0/0:7,0:6:15.01:0,15,183	0/0:18,0:18:48.17:0,48,500	0/0:24,0:24:43.16:0,43,426	0/0:25,0:25:55.90:0,56,579	1/1:3,12:15:41.90:358,42,0	0/1:15,20:35:93:343,0,93	0/0:21,0:21:51.81:0,52,533	0/0:38,0:38:95.24:0,95,991	0/0:17,0:16:35.55:0,36,366	0/0:6,0:6:17.78:0,18,140
chr10	70662473	.	TCTCTCTCTCA	T	1016.56	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=3.435;DP=745;FS=1.237;HRun=0;HaplotypeScore=181.8487;InbreedingCoeff=0.6982;MQ=47.07;MQ0=51;MQRankSum=-0.760;QD=6.02;ReadPosRankSum=-3.771;VQSLOD=1.8116;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:22:19.59:20,0,135	0/0:14,0:13:11.42:0,11,812	0/1:77,0:7:4.26:4,0,48	0/0:124,0:15:5.23:0,5,259	0/0:14,0:14:33.01:0,33,951	0/0:22,0:22:31.84:0,32,1052	0/0:25,0:25:62.87:0,63,1731	0/0:28,0:27:47.41:0,47,780	0/0:17,0:17:41.94:0,42,1185	0/0:23,0:23:42.89:0,43,1347	0/0:12,0:12:33.10:0,33,1215	0/0:21,0:21:40.36:0,40,1685	1/1:14,1:15:38.85:534,39,0	0/0:25,0:24:60.17:0,60,1836	0/0:24,0:23:51.13:0,51,1667	0/0:24,0:24:50.64:0,51,1771	0/0:23,0:23:40.42:0,40,1950	1/1:8,1:8:4.94:229,5,0	0/0:13,0:11:23.66:0,24,742	0/0:29,0:28:47.86:0,48,1100	0/0:25,0:25:41.54:0,42,1379	0/0:19,0:19:36.62:0,37,1214	1/1:19,2:20:17.72:241,18,0	1/1:22,1:22:8.42:142,8,0	0/0:19,0:19:31.30:0,31,1026	0/0:32,0:31:62.82:0,63,1710	0/0:28,0:26:63.09:0,63,2128	0/0:13,0:13:29.99:0,30,903
chr10	70662481	.	TCA	T	934.16	PASS	AB=0.994;AC=15;AF=0.268;AN=56;BaseQRankSum=9.268;DP=717;FS=0.403;HRun=0;HaplotypeScore=100.0396;InbreedingCoeff=0.3253;MQ=47.12;MQ0=43;MQRankSum=-0.099;QD=2.57;ReadPosRankSum=-1.761;VQSLOD=1.8728;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,2:21:36.35:281,36,0	0/0:15,0:14:14.32:0,14,324	0/1:72,0:9:12.82:13,0,42	0/1:117,0:14:21.21:21,0,36	0/0:17,0:17:35.85:0,36,441	0/1:21,0:21:44.55:45,0,200	0/1:24,0:24:22.03:22,0,564	0/0:24,0:24:10.74:0,11,436	0/0:17,1:18:6.87:0,7,518	0/1:20,0:20:20.96:21,0,417	0/0:15,0:15:19.98:0,20,545	0/0:20,0:20:16.25:0,16,569	1/1:15,1:16:31.09:269,31,0	0/0:24,0:23:26.29:0,26,600	0/0:20,0:19:5.60:0,6,588	0/0:23,0:23:37.09:0,37,631	0/0:26,0:26:9.48:0,9,802	1/1:12,0:11:28.38:204,28,0	0/0:12,0:10:19.11:0,19,310	0/0:28,0:27:19.84:0,20,497	0/0:22,0:22:43.37:0,43,569	0/0:20,0:20:42.11:0,42,531	1/1:22,1:22:20.58:146,21,0	0/1:23,1:24:14.67:39,0,15	0/0:19,0:19:30.78:0,31,435	0/0:25,0:24:16.94:0,17,614	0/0:25,1:24:16.38:0,16,764	0/1:10,0:10:52.70:53,0,180
chr10	70662503	.	TGC	T	318.98	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=9.765;DP=735;FS=59.341;HRun=0;HaplotypeScore=112.1665;InbreedingCoeff=0.7782;MQ=59.97;MQ0=25;MQRankSum=-1.616;QD=1.90;ReadPosRankSum=0.473;VQSLOD=-0.2572;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,2:25:21.44:194,21,0	0/0:15,0:14:38.79:0,39,698	0/1:65,0:19:1.72:2,0,282	0/0:96,3:24:23.93:0,24,421	0/0:15,3:18:39.13:0,39,719	0/0:23,0:23:16.94:0,17,799	0/0:22,0:22:28.40:0,28,834	0/0:37,1:37:87.10:0,87,1828	0/0:19,0:19:54.15:0,54,886	0/0:15,0:15:40.01:0,40,744	0/0:17,0:17:51.16:0,51,917	0/0:24,0:24:59.86:0,60,1159	1/1:17,0:17:26.74:158,27,0	0/0:25,0:25:49.73:0,50,1122	0/0:25,0:25:58.11:0,58,975	0/0:25,1:26:21.29:0,21,1157	0/0:27,0:27:72.89:0,73,1286	0/0:9,0:8:21.54:0,22,341	0/1:14,0:13:4.12:4,0,491	0/0:24,0:24:33.80:0,34,1008	0/0:25,0:25:59.28:0,59,1001	0/0:29,0:29:68.81:0,69,1056	1/1:18,4:22:11.39:96,11,0	1/1:23,0:23:4.89:14,5,0	0/0:20,0:19:51.15:0,51,862	0/0:26,1:27:46:0,46,1171	0/0:25,0:24:67.11:0,67,1174	0/0:14,0:14:34.67:0,35,626
chr10	70662505	.	CCTCT	C	514.66	PASS	AB=0.804;AC=8;AF=0.143;AN=56;BaseQRankSum=6.172;DP=751;FS=10.276;HRun=0;HaplotypeScore=135.3828;InbreedingCoeff=0.6752;MQ=59.96;MQ0=23;MQRankSum=-3.413;QD=2.69;ReadPosRankSum=1.995;VQSLOD=2.1370;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,18:27:33.14:58,0,33	0/0:15,0:14:38.77:0,39,948	0/0:68,0:21:22.35:0,22,386	0/1:101,0:25:2.75:3,0,185	0/0:19,0:19:39.13:0,39,973	0/0:21,0:23:53.94:0,54,1309	0/0:21,0:21:62.67:0,63,1413	0/0:40,0:39:99:0,105,2358	0/0:18,0:18:48.16:0,48,1227	0/0:17,0:17:48.15:0,48,1035	0/0:17,0:17:48.16:0,48,1208	0/0:24,0:24:60.19:0,60,1414	1/1:5,14:19:24.55:389,25,0	0/0:24,0:24:69.15:0,69,1692	0/0:26,0:26:69.17:0,69,1456	0/0:27,0:27:68.87:0,69,1567	0/0:27,0:27:71.46:0,71,1757	0/0:9,0:8:23.57:0,24,548	0/0:15,0:14:31.92:0,32,690	0/0:24,0:24:68.43:0,68,1597	0/0:25,0:25:57.20:0,57,1367	0/0:29,0:29:68.80:0,69,1636	1/1:8,14:22:8.88:142,9,0	1/1:2,19:21:4.24:59,4,0	0/0:21,0:20:51.14:0,51,1165	0/0:31,0:31:84.75:0,85,1894	0/0:24,0:24:60.90:0,61,1361	0/0:14,0:14:42.14:0,42,1013
chr10	70663484	.	TA	T	1345.13	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.964;DP=640;FS=7.192;HRun=4;HaplotypeScore=61.0406;InbreedingCoeff=0.9988;MQ=81.20;MQ0=2;MQRankSum=-4.934;QD=29.89;ReadPosRankSum=1.557;VQSLOD=3.6405;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,45:45:99:1440,120,0	0/0:10,0:10:30.10:0,30,420	0/0:14,0:14:36.12:0,36,476	0/0:22,0:22:60.18:0,60,765	0/0:23,0:23:63.21:0,63,882	0/0:13,0:13:33.10:0,33,446	0/0:23,0:23:63.21:0,63,881	0/0:24,0:24:63.21:0,63,882	0/0:26,0:26:78.26:0,78,1091	0/0:25,0:25:72.23:0,72,995	0/0:16,0:16:48.15:0,48,655	0/0:31,0:31:90.30:0,90,1260	0/0:15,0:15:45.15:0,45,629	0/0:32,0:32:93.31:0,93,1299	0/0:28,0:28:81.26:0,81,1118	0/0:17,0:16:45.15:0,45,630	0/0:40,0:40:99:0,117,1582	0/0:22,0:22:63.21:0,63,881	0/0:13,0:13:33.11:0,33,459	0/0:17,0:17:48.16:0,48,671	0/0:34,0:34:93.31:0,93,1301	0/0:20,0:20:57.18:0,57,782	0/0:15,0:15:42.14:0,42,588	0/0:31,0:30:87.29:0,87,1218	0/0:20,0:20:54.18:0,54,756	0/0:21,0:21:63.18:0,63,834	0/0:23,0:23:66.22:0,66,924	0/0:20,0:20:60.20:0,60,839
chr10	70664653	.	G	GA	869.91	PASS	AC=34;AF=0.895;AN=38;BaseQRankSum=-1.795;DP=120;FS=23.118;HRun=1;HaplotypeScore=25.2299;InbreedingCoeff=0.3357;MQ=58.25;MQ0=5;MQRankSum=-2.200;QD=12.43;ReadPosRankSum=0.234;VQSLOD=0.2286;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:8:15.04:176,15,0	./.	0/0:8,0:7:7.23:0,7,74	0/0:22,0:9:8.52:0,9,87	./.	1/1:0,3:2:3.01:36,3,0	1/1:2,8:9:1.25:59,1,0	1/1:0,4:4:12.01:140,12,0	1/1:4,1:5:8.65:50,9,0	1/1:0,2:2:6.02:70,6,0	1/1:1,3:3:3.01:36,3,0	1/1:1,4:4:8.78:57,9,0	./.	1/1:0,3:3:6:60,6,0	1/1:1,3:4:5.87:34,6,0	1/1:0,5:5:3:27,3,0	./.	1/1:2,2:4:6.64:59,7,0	1/1:1,0:1:2.98:21,3,0	./.	1/1:3,0:3:0.47:1,0,0	1/1:2,1:3:3.01:36,3,0	./.	./.	./.	1/1:0,3:3:6.02:74,6,0	1/1:0,2:2:3.01:38,3,0	./.
chr10	70665785	.	CTGT	C	1081.74	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.356;DP=755;FS=0.780;HRun=0;HaplotypeScore=104.0811;InbreedingCoeff=0.9940;MQ=89.85;MQ0=0;MQRankSum=-4.912;QD=38.63;ReadPosRankSum=0.496;VQSLOD=4.3330;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,2814	0/0:7,0:7:21.07:0,21,466	0/0:26,0:26:78.27:0,78,1731	0/0:33,0:33:87.15:0,87,1920	0/0:23,0:23:66.23:0,66,1484	0/0:27,0:27:81.26:0,81,1824	0/0:25,0:25:75.26:0,75,1713	0/0:34,0:34:93.32:0,93,2118	0/0:35,0:35:99:0,105,2356	0/0:41,0:41:99:0,123,2815	0/0:18,0:18:51.18:0,51,1160	0/0:22,0:22:66.21:0,66,1442	0/0:32,0:32:90.29:0,90,2030	0/0:20,0:20:60.21:0,60,1383	0/0:27,0:27:78.27:0,78,1799	0/0:29,0:29:84.29:0,84,1938	0/0:31,0:31:87.28:0,87,1916	1/1:3,25:28:69.24:1177,69,0	0/0:25,0:25:72.25:0,72,1645	0/0:23,0:23:66.23:0,66,1447	0/0:37,0:37:99:0,108,2419	0/0:27,0:27:75.24:0,75,1652	0/0:23,0:23:63.22:0,63,1432	0/0:26,0:26:78.27:0,78,1798	0/0:17,0:17:51.18:0,51,1161	0/0:34,0:34:96.31:0,96,2113	0/0:34,0:33:99:0,99,2209	0/0:9,0:9:24.08:0,24,554
chr10	70667418	.	TACAGTTGTGC	T	683.98	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.436;DP=709;FS=0.000;HRun=0;HaplotypeScore=221.0493;InbreedingCoeff=0.9430;MQ=81.34;MQ0=0;MQRankSum=-4.823;QD=48.86;ReadPosRankSum=-0.179;VQSLOD=2.7080;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,5571	0/0:12,0:12:36.12:0,36,1809	0/0:19,0:19:48.16:0,48,2145	0/0:29,0:28:60.21:0,60,2045	0/0:27,0:27:81.24:0,81,4031	0/0:35,0:35:99:0,102,5047	0/0:28,0:28:78.27:0,78,3503	0/0:28,0:28:75.26:0,75,3536	0/0:25,0:25:75.24:0,75,3729	0/0:32,0:32:90.31:0,90,4614	0/0:18,0:18:54.12:0,54,2313	0/0:27,0:27:78.24:0,78,3842	0/0:24,0:24:69.69:0,70,2921	0/0:28,0:28:78.27:0,78,3994	0/0:31,0:31:87.30:0,87,4338	0/0:25,0:25:75.26:0,75,3816	0/0:30,0:30:87.30:0,87,4521	1/1:5,9:14:24.08:777,24,0	0/0:20,0:20:51.17:0,51,2287	0/0:24,0:24:69.20:0,69,3343	0/0:26,0:26:78.24:0,78,3619	0/0:34,0:34:96.26:0,96,4404	0/0:17,0:17:36.12:0,36,1646	0/0:26,0:26:74.27:0,74,3257	0/0:19,0:19:54.15:0,54,2519	0/0:33,0:33:93.32:0,93,4014	0/0:32,0:32:90.31:0,90,4738	0/0:3,0:3:9.03:0,9,406
chr10	70668560	.	AGGAGAGACTCAGAGTCG	A	1246.81	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.153;DP=693;FS=5.040;HRun=0;HaplotypeScore=303.0376;InbreedingCoeff=0.9959;MQ=86.61;MQ0=0;MQRankSum=-4.324;QD=69.27;ReadPosRankSum=0.778;VQSLOD=2.3281;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,9829	0/0:8,0:8:24.08:0,24,1767	0/0:31,0:31:67.47:0,67,2891	0/0:44,0:39:91.77:0,92,4178	0/0:17,0:17:45.15:0,45,3006	0/0:19,0:19:48.16:0,48,2898	0/0:48,0:48:99:0,135,9757	0/0:25,0:25:69.23:0,69,4191	0/0:20,0:20:60.19:0,60,4374	0/0:25,0:25:75.26:0,75,5494	0/0:16,0:16:45.15:0,45,2968	0/0:30,0:30:87.30:0,87,6436	0/0:18,0:18:51.17:0,51,3617	0/0:21,0:21:63.22:0,63,4308	0/0:21,0:21:57.20:0,57,4221	0/0:18,0:18:54.17:0,54,3248	0/0:38,0:38:99:0,111,8904	1/1:2,16:18:27.09:1341,27,0	0/0:19,0:19:54.18:0,54,3097	0/0:11,0:11:27.07:0,27,1702	0/0:45,0:45:99:0,129,8934	0/0:16,0:16:45.15:0,45,3549	0/0:16,0:16:45.15:0,45,3183	0/0:29,0:29:84.29:0,84,6286	0/0:17,0:17:48.16:0,48,3284	0/0:32,0:32:96.32:0,96,6613	0/0:29,0:29:84.29:0,84,6169	0/0:16,0:16:45.15:0,45,3546
chr10	70668841	.	A	AGG	1268.75	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.611;DP=587;FS=1.628;HRun=5;HaplotypeScore=69.8613;InbreedingCoeff=0.9986;MQ=86.91;MQ0=0;MQRankSum=-0.802;QD=45.31;ReadPosRankSum=2.214;VQSLOD=2.7644;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:99:0,108,1348	0/0:11,0:11:33.11:0,33,421	0/0:22,0:22:54.17:0,54,683	0/0:20,0:20:48.10:0,48,590	0/0:19,0:19:48.15:0,48,611	0/0:22,0:22:63.20:0,63,802	0/0:39,0:39:99:0,105,1324	0/0:24,0:24:66.19:0,66,826	0/0:13,0:13:39.10:0,39,481	0/0:32,0:32:93.29:0,93,1175	0/0:13,0:13:39.12:0,39,497	0/0:21,0:21:60.16:0,60,735	0/0:17,0:17:45.11:0,45,546	0/0:25,0:25:66.19:0,66,824	0/0:11,0:11:30.09:0,30,382	0/0:14,0:14:39.11:0,39,484	0/0:32,0:32:84.25:0,84,1056	1/1:2,26:28:78.27:1364,78,0	0/0:21,0:21:54.17:0,54,688	0/0:18,0:18:54.17:0,54,688	0/0:22,0:22:63.20:0,63,803	0/0:12,0:12:33.09:0,33,408	0/0:22,0:22:59.86:0,60,749	0/0:28,0:28:84.23:0,84,1041	0/0:16,0:16:48.15:0,48,610	0/0:20,0:20:60.19:0,60,765	0/0:13,0:13:36.10:0,36,445	0/0:15,0:15:45.14:0,45,573
chr10	70670024	.	TTG	T	1009.66	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.820;DP=798;FS=0.757;HRun=0;HaplotypeScore=95.3595;InbreedingCoeff=0.9994;MQ=84.16;MQ0=0;MQRankSum=-2.290;QD=32.57;ReadPosRankSum=1.750;VQSLOD=5.4388;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,151,2788	0/0:13,0:13:39.13:0,39,730	0/0:26,0:26:75.22:0,75,1268	0/0:27,0:27:75.26:0,75,1368	0/0:29,0:29:78.27:0,78,1448	0/0:14,0:14:39.13:0,39,730	0/0:25,0:25:75.26:0,75,1386	0/0:31,0:31:84.26:0,84,1479	0/0:24,0:24:72.25:0,72,1340	0/0:26,0:26:78.26:0,78,1426	0/0:20,0:20:54.19:0,54,1004	0/0:34,0:34:96.33:0,96,1770	0/0:37,0:37:99:0,111,2019	0/0:25,0:25:75.26:0,75,1398	0/0:46,0:46:99:0,138,2532	0/0:29,0:29:87.30:0,87,1622	0/0:35,0:35:99:0,102,1890	1/1:1,30:31:75.25:1105,75,0	0/0:23,0:23:60.21:0,60,1107	0/0:21,0:21:57.20:0,57,1067	0/0:57,0:57:99:0,163,2993	0/0:21,0:21:54.17:0,54,975	0/0:24,0:24:72.25:0,72,1348	0/0:49,0:49:99:0,147,2705	0/0:17,0:17:48.16:0,48,899	0/0:23,0:23:66.22:0,66,1200	0/0:29,0:29:87.30:0,87,1620	0/0:10,0:10:30.10:0,30,562
chr10	70671405	.	G	GCC	533.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.462;DP=609;FS=3.481;HRun=2;HaplotypeScore=78.2741;InbreedingCoeff=0.8067;MQ=70.91;MQ0=0;MQRankSum=-2.785;QD=38.11;ReadPosRankSum=-0.640;VQSLOD=3.5060;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:34.89:0,35,460	0/0:11,0:11:33.11:0,33,480	0/0:12,0:12:1.84:0,2,373	0/0:7,0:7:18:0,18,208	0/0:11,0:11:30.10:0,30,441	0/0:22,0:22:60.17:0,60,857	0/0:41,0:41:99:0,120,1697	0/0:28,0:28:78.25:0,78,1121	0/0:23,0:23:63.21:0,63,925	0/0:17,0:17:51.17:0,51,747	0/0:6,0:6:15.05:0,15,218	0/0:31,0:31:93.30:0,93,1345	0/0:22,0:22:66.17:0,66,919	0/0:29,0:29:87.29:0,87,1277	0/0:36,0:36:99:0,105,1527	0/0:17,0:17:51.17:0,51,750	0/0:31,0:31:93.27:0,93,1326	1/1:2,11:14:39.11:628,39,0	0/0:20,0:20:57.18:0,57,802	0/0:11,0:11:27.09:0,27,397	0/0:49,0:49:99:0,144,2111	0/0:14,0:14:36.11:0,36,510	0/0:7,0:7:21.07:0,21,308	0/0:32,0:32:96.26:0,96,1365	0/0:20,0:20:57.19:0,57,839	0/0:25,0:25:69.23:0,69,999	0/0:23,0:23:66.22:0,66,968	0/0:15,0:15:45.15:0,45,659
chr10	70672434	.	G	GC	6335.35	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.231;DP=736;FS=13.572;HRun=4;HaplotypeScore=85.0576;InbreedingCoeff=0.9996;MQ=88.15;MQ0=0;MQRankSum=-2.285;QD=35.00;ReadPosRankSum=4.448;VQSLOD=3.9722;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,42:43:99:1517,111,0	0/0:9,0:9:24.05:0,24,261	0/0:20,0:20:51.07:0,51,539	0/0:32,0:32:83.93:0,84,888	0/0:35,0:35:99:0,99,1079	0/0:26,0:26:69.20:0,69,781	0/0:27,0:27:81.23:0,81,918	0/0:38,0:38:99:0,108,1153	0/0:25,0:25:66.13:0,66,724	0/0:33,0:33:89.45:0,89,981	0/0:19,0:19:51.13:0,51,568	0/0:27,0:27:78.22:0,78,884	1/1:3,24:27:35.17:844,35,0	0/0:26,0:26:66.17:0,66,736	0/0:32,0:32:90.26:0,90,1020	0/0:25,0:25:72.14:0,72,800	0/0:29,0:29:87.22:0,87,973	1/1:3,30:33:81.27:1105,81,0	0/0:23,0:23:66.18:0,66,742	0/0:23,0:23:66.19:0,66,747	0/0:36,0:36:99:0,99,1104	0/0:24,0:24:66.19:0,66,747	1/1:1,22:23:63.21:860,63,0	1/1:1,21:22:54.18:738,54,0	0/0:22,0:22:66.17:0,66,738	1/1:0,18:18:51.17:697,51,0	0/0:24,0:24:66.17:0,66,737	1/1:0,15:15:42.14:574,42,0
chr10	70675490	.	C	CTT	7828.96	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-16.140;DP=724;FS=2.466;HRun=2;HaplotypeScore=79.0344;InbreedingCoeff=0.9726;MQ=84.27;MQ0=0;MQRankSum=-1.853;QD=46.88;ReadPosRankSum=4.167;VQSLOD=4.8015;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,53:53:99:2436,132,0	0/0:13,0:13:33.11:0,33,477	0/0:27,0:27:66.20:0,66,926	0/0:16,0:16:47.79:0,48,633	0/0:21,0:21:54.18:0,54,790	0/0:27,0:27:72.19:0,72,999	0/0:21,0:21:60.20:0,60,884	0/0:33,0:33:84.25:0,84,1182	0/0:27,0:27:81.26:0,81,1172	0/0:41,0:41:99:0,111,1600	0/0:9,0:9:27.09:0,27,396	0/0:38,0:38:99:0,105,1524	1/1:0,26:27:69.24:1287,69,0	0/0:24,0:24:72.22:0,72,1020	0/0:37,0:37:99:0,111,1594	0/0:22,0:22:66.22:0,66,971	0/0:38,0:38:99:0,114,1636	1/1:1,11:12:30.10:562,30,0	0/0:27,0:27:72.24:0,72,1060	0/0:13,0:13:39.06:0,39,539	0/0:51,0:51:99:0,150,2187	0/0:19,0:19:51.17:0,51,751	1/1:0,17:17:42.14:787,42,0	1/1:1,31:32:75.26:1405,75,0	0/0:25,0:25:66.22:0,66,972	1/1:1,15:16:4.12:790,4,0	0/0:28,0:27:84.19:0,84,1133	1/1:0,10:10:30.10:562,30,0
chr10	70676202	.	AGT	A	1299.90	PASS	AB=0.964;AC=36;AF=0.818;AN=44;BaseQRankSum=4.061;DP=598;FS=0.000;HRun=0;HaplotypeScore=87.3681;InbreedingCoeff=0.2938;MQ=63.34;MQ0=10;MQRankSum=0.175;QD=3.34;ReadPosRankSum=2.098;VQSLOD=1.8124;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:6.34:0,6,239	1/1:4,1:6:5.85:46,6,0	./.	./.	1/1:16,0:16:2.84:14,3,0	0/0:18,0:18:0:0,0,0	0/1:24,1:26:25.89:98,0,26	./.	1/1:13,5:18:9.02:95,9,0	1/1:13,0:13:6:56,6,0	1/1:10,6:15:8.67:83,9,0	1/1:15,6:21:3.01:32,3,0	1/1:14,0:20:11.36:56,11,0	1/1:13,4:18:14.87:142,15,0	1/1:22,4:26:14.85:133,15,0	1/1:15,9:24:14.87:142,15,0	1/1:33,4:37:17.28:159,17,0	0/0:21,0:31:14.97:0,15,147	./.	1/1:15,1:16:6.02:64,6,0	0/1:31,0:29:13.20:25,0,13	1/1:12,2:14:3.01:32,3,0	1/1:12,0:15:2.84:14,3,0	1/1:28,0:35:8.52:42,9,0	1/1:15,4:20:17.35:155,17,0	./.	1/1:14,1:14:3.01:32,3,0	./.
chr10	70679487	.	GGTT	G	5108.20	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=12.712;DP=728;FS=6.034;HRun=0;HaplotypeScore=107.6764;InbreedingCoeff=0.9295;MQ=71.57;MQ0=1;MQRankSum=-1.175;QD=24.21;ReadPosRankSum=3.679;VQSLOD=4.7042;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,34:47:72.17:999,72,0	0/0:12,0:12:30.10:0,30,604	0/0:25,0:20:30.08:0,30,489	0/0:26,0:24:42.05:0,42,684	0/0:23,0:23:51.16:0,51,991	0/1:20,0:20:0.81:1,0,731	0/0:30,0:30:54.19:0,54,1098	0/0:26,0:26:33.11:0,33,665	0/0:29,0:29:63.22:0,63,1269	0/0:23,0:23:45.15:0,45,884	0/0:13,0:13:27.09:0,27,549	0/0:33,0:33:84.29:0,84,1694	1/1:4,15:20:39.10:537,39,0	0/0:30,0:30:69.22:0,69,1350	0/0:33,1:34:38.31:0,38,1511	0/0:24,0:24:51.18:0,51,1027	0/0:33,0:33:81.28:0,81,1646	1/1:5,22:27:63.21:902,63,0	0/0:20,0:20:39.12:0,39,728	0/0:15,0:15:30.10:0,30,597	0/0:41,1:42:44.30:0,44,1571	0/0:22,0:22:48.16:0,48,969	1/1:4,28:32:66.22:937,66,0	1/1:8,27:35:66.22:945,66,0	0/0:33,0:33:81.28:0,81,1608	1/1:9,16:26:49.37:702,49,0	0/0:24,0:24:60.19:0,60,1152	1/1:0,4:4:6.02:86,6,0
chr10	70683905	.	T	TACAC	1673.54	PASS	AB=1.000;AC=23;AF=0.442;AN=52;BaseQRankSum=1.109;DP=555;FS=2.416;HRun=0;HaplotypeScore=112.8300;InbreedingCoeff=0.6802;MQ=64.24;MQ0=11;MQRankSum=0.203;QD=6.64;ReadPosRankSum=-1.815;VQSLOD=2.4599;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,11:45:6.02:122,6,0	0/0:5,0:5:5.97:0,6,66	./.	./.	0/0:15,0:15:11.25:0,11,309	0/0:10,0:10:9.03:0,9,135	0/0:27,0:30:37.03:0,37,497	1/1:19,0:19:7.75:45,8,0	0/0:13,0:14:3:0,3,28	0/0:30,0:32:15.02:0,15,194	0/0:13,0:14:6.02:0,6,92	1/1:15,0:21:2.74:12,3,0	0/0:10,0:12:5.87:0,6,56	1/1:17,0:20:8.23:36,8,0	0/0:22,0:22:21.07:0,21,321	0/0:12,0:12:9.03:0,9,137	0/0:17,0:22:21.04:0,21,266	1/1:11,0:11:15.05:267,15,0	1/1:17,2:20:6:93,6,0	1/1:12,0:11:8.87:83,9,0	0/1:39,0:39:7.46:474,0,7	1/1:9,0:15:8.32:40,8,0	0/0:22,0:22:14.91:0,15,230	0/0:19,0:21:27.06:0,27,372	0/0:14,0:14:9.02:0,9,117	1/1:25,0:25:25.90:494,26,0	1/1:4,4:9:6.02:139,6,0	1/1:7,0:12:3.01:52,3,0
chr10	70687932	.	T	TAG	3449.31	PASS	AB=0.531;AC=13;AF=0.232;AN=56;BaseQRankSum=13.926;DP=572;FS=0.451;HRun=0;HaplotypeScore=103.8667;InbreedingCoeff=0.8657;MQ=84.11;MQ0=0;MQRankSum=-13.493;QD=41.56;ReadPosRankSum=3.358;VQSLOD=5.0121;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:10:30.10:461,30,0	0/0:13,0:13:39.11:0,39,609	0/0:18,0:18:49.01:0,49,698	0/0:18,0:19:44.87:0,45,687	0/0:33,0:33:99:0,99,1607	0/0:24,0:24:69.24:0,69,1122	0/0:19,0:19:57.19:0,57,925	0/0:38,0:38:99:0,114,1834	0/0:14,0:14:42.14:0,42,685	0/0:34,0:34:99:0,102,1614	0/0:25,0:25:72.23:0,72,1150	0/0:24,0:24:72.23:0,72,1151	1/1:1,15:16:48.16:740,48,0	0/0:24,0:24:69.24:0,69,1121	0/0:37,0:37:99:0,108,1733	0/0:24,0:24:69.19:0,69,1054	0/0:10,0:10:30.10:0,30,489	1/1:1,8:9:24.08:386,24,0	0/0:12,0:12:36.11:0,36,562	0/0:24,0:24:72.25:0,72,1173	0/0:21,0:21:63.22:0,63,1028	0/0:21,0:21:63.20:0,63,1002	1/1:0,21:23:63.21:952,63,0	1/1:0,5:5:6.02:96,6,0	0/0:25,0:25:75.25:0,75,1198	0/1:2,15:17:46.73:679,0,47	0/0:30,0:30:87.30:0,87,1415	1/1:0,3:3:9.03:136,9,0
chr10	70687938	.	A	AT	3520.14	PASS	AB=0.575;AC=13;AF=0.232;AN=56;BaseQRankSum=15.179;DP=604;FS=5.664;HRun=2;HaplotypeScore=105.6174;InbreedingCoeff=0.8996;MQ=79.21;MQ0=0;MQRankSum=-14.978;QD=32.90;ReadPosRankSum=-0.001;VQSLOD=3.0767;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:10:30.09:368,30,0	0/0:14,0:14:42.11:0,42,505	0/0:14,0:14:36.11:0,36,446	0/0:18,0:18:45.14:0,45,557	0/0:33,0:33:99:0,99,1227	0/0:26,0:26:75.22:0,75,915	0/0:20,0:20:57.15:0,57,679	0/0:37,0:37:99:0,99,1185	0/0:15,0:15:39.12:0,39,483	0/0:36,0:36:99:0,102,1256	0/0:26,0:26:75.22:0,75,907	0/0:26,0:26:75.22:0,75,915	1/1:8,15:23:69.20:814,69,0	0/0:23,0:23:69.22:0,69,855	0/0:36,0:36:99:0,108,1339	0/0:25,0:25:60.19:0,60,744	0/0:14,0:14:39.12:0,39,482	1/1:2,8:10:30.09:353,30,0	0/0:8,0:8:24.08:0,24,298	0/0:25,0:25:69.22:0,69,854	0/0:22,0:22:66.21:0,66,816	0/0:22,0:22:66.19:0,66,804	1/1:7,21:28:84.26:1030,84,0	1/1:5,5:10:17.98:164,18,0	0/0:26,0:26:72.23:0,72,892	0/1:6,17:23:8.22:680,0,8	0/0:31,0:31:93.29:0,93,1152	1/1:0,3:3:9.03:111,9,0
chr10	70689247	.	GCA	G	1279.05	PASS	AB=0.871;AC=25;AF=0.463;AN=54;BaseQRankSum=9.115;DP=606;FS=1.718;HRun=0;HaplotypeScore=99.1973;InbreedingCoeff=-0.0071;MQ=56.81;MQ0=11;MQRankSum=-1.172;QD=2.94;ReadPosRankSum=1.204;VQSLOD=2.1421;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,7:35:98.55:99,0,397	0/1:14,3:17:33.21:33,0,318	./.	0/1:16,0:3:0:0,0,0	0/1:13,9:22:26.99:90,0,27	0/1:15,5:20:40.95:41,0,222	0/1:25,3:28:36.65:37,0,253	0/0:25,0:24:14.96:0,15,145	0/0:19,1:20:2.83:0,3,410	0/1:16,1:17:5.51:6,0,274	0/0:9,0:9:18.06:0,18,266	0/0:21,1:23:8.96:0,9,491	1/1:12,0:27:17.15:88,17,0	0/1:15,4:19:36.24:36,0,305	0/0:21,0:21:30.08:0,30,423	0/1:14,4:19:86.48:86,0,176	0/1:25,5:30:80.92:81,0,383	1/1:12,14:27:50.77:512,51,0	0/1:12,1:12:23.26:23,0,81	0/0:27,0:27:6.03:0,6,454	0/1:43,1:40:52.15:52,0,376	0/0:17,0:17:21.04:0,21,268	1/1:8,0:17:11.39:72,11,0	1/1:12,0:22:8.52:42,9,0	0/1:29,2:33:46.99:47,0,531	1/1:16,1:17:1.46:34,1,0	0/0:14,0:14:15.03:0,15,205	1/1:2,0:9:14.20:70,14,0
chr10	70689670	.	GTTT	G	2484.92	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.749;DP=599;FS=7.716;HRun=14;HaplotypeScore=93.8551;InbreedingCoeff=0.9565;MQ=68.97;MQ0=3;MQRankSum=-0.855;QD=18.41;ReadPosRankSum=6.575;VQSLOD=2.3149;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,30:41:41.41:853,41,0	0/0:10,0:10:18.06:0,18,333	0/0:32,0:16:23.40:0,23,381	0/0:18,0:9:2.19:0,2,100	0/0:22,0:26:66.18:0,66,1111	0/0:17,0:19:48.16:0,48,878	0/0:21,0:22:57.17:0,57,1008	0/0:30,0:31:78.25:0,78,1368	0/0:18,0:18:42.14:0,42,729	0/0:22,0:23:57.19:0,57,1023	0/0:21,0:22:54.17:0,54,938	0/0:18,0:18:45.15:0,45,757	1/1:5,0:19:35.25:214,35,0	0/0:17,0:20:48.12:0,48,754	0/0:19,0:20:57.17:0,57,984	0/0:19,0:20:51.14:0,51,847	0/0:30,0:32:84.27:0,84,1485	1/1:2,16:18:42.10:491,42,0	0/0:25,0:26:51.14:0,51,843	0/0:18,0:20:60.18:0,60,1061	0/0:8,0:9:21.07:0,21,377	0/0:27,0:27:72.23:0,72,1257	1/1:5,0:19:32.32:198,32,0	1/1:2,0:17:41.25:261,41,0	0/0:22,0:22:54.14:0,54,940	1/1:0,16:16:45.09:524,45,0	0/0:24,0:27:78.16:0,78,1212	1/1:0,5:5:12.04:140,12,0
chr10	70690550	.	TAC	T	492.41	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.130;DP=773;FS=1.062;HRun=0;HaplotypeScore=86.8322;InbreedingCoeff=0.9843;MQ=78.08;MQ0=0;MQRankSum=-1.453;QD=32.83;ReadPosRankSum=0.237;VQSLOD=5.6067;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,2549	0/0:12,0:12:36.12:0,36,694	0/0:25,0:25:68.53:0,69,1138	0/0:20,0:20:54.19:0,54,1033	0/0:27,0:27:75.26:0,75,1421	0/0:27,0:26:81.28:0,81,1564	0/0:25,0:25:69.22:0,69,1300	0/0:37,0:37:99:0,105,1991	0/0:24,0:24:72.25:0,72,1390	0/0:42,0:42:99:0,123,2370	1/1:0,15:15:39.13:587,39,0	0/0:34,0:34:99:0,102,1952	0/0:26,0:26:78.25:0,78,1453	0/0:38,0:38:99:0,114,2202	0/0:30,0:30:87.30:0,87,1680	0/0:27,0:27:78.25:0,78,1474	0/0:29,0:29:87.30:0,87,1680	0/0:21,0:21:63.22:0,63,1179	0/0:22,0:21:63.21:0,63,1186	0/0:29,0:29:84.29:0,84,1622	0/0:25,0:25:75.21:0,75,1346	0/0:30,0:30:84.29:0,84,1621	0/0:34,0:34:99:0,99,1890	0/0:27,0:27:78.25:0,78,1444	0/0:34,0:34:99:0,102,1920	0/0:30,0:30:90.29:0,90,1664	0/0:31,0:31:81.28:0,81,1526	0/0:7,0:7:15.05:0,15,290
chr10	70691178	.	C	CGT	1344.28	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.726;DP=743;FS=6.081;HRun=0;HaplotypeScore=91.4161;InbreedingCoeff=0.9956;MQ=79.85;MQ0=0;MQRankSum=-0.082;QD=42.01;ReadPosRankSum=1.750;VQSLOD=5.0442;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,172,2447	0/0:11,0:11:27.09:0,27,386	0/0:18,0:18:40.10:0,40,470	0/0:25,0:24:57.17:0,57,766	0/0:31,0:31:78.26:0,78,1117	0/0:20,0:20:54.16:0,54,738	0/0:23,0:23:60.20:0,60,860	0/0:29,0:29:69.22:0,69,967	0/0:31,0:31:93.31:0,93,1330	0/0:26,0:26:66.20:0,66,910	0/0:14,0:14:30.10:0,30,424	0/0:35,0:35:96.31:0,96,1353	0/0:29,0:29:78.26:0,78,1110	0/0:24,0:24:63.21:0,63,901	0/0:38,0:38:99:0,111,1590	0/0:27,0:27:78.26:0,78,1117	0/0:28,0:28:84.28:0,84,1204	0/0:24,0:24:69.23:0,69,989	0/0:20,0:20:48.15:0,48,670	0/0:25,0:25:72.22:0,72,1011	0/0:37,0:37:96.29:0,96,1337	0/0:35,0:35:96.32:0,96,1375	0/0:20,0:20:54.64:0,55,756	0/0:32,0:32:93.30:0,93,1313	0/0:20,0:20:57.19:0,57,816	1/1:2,20:22:20.25:1024,20,0	0/0:32,0:32:87.29:0,87,1233	1/1:2,8:10:24.08:440,24,0
chr10	70692534	.	ACACT	A	4979.98	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.341;DP=1258;FS=6.236;HRun=0;HaplotypeScore=229.4853;InbreedingCoeff=0.9936;MQ=58.86;MQ0=2;MQRankSum=-0.165;QD=38.02;ReadPosRankSum=3.591;VQSLOD=4.4713;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,48:56:79.70:1747,80,0	0/0:15,0:15:45.15:0,45,1183	0/0:54,0:41:99:0,111,2550	0/0:49,0:38:86.64:0,87,2107	0/0:31,0:31:84.29:0,84,2229	0/0:45,0:45:99:0,117,3118	0/0:43,0:43:99:0,123,2968	0/0:55,0:55:99:0,153,3638	0/0:50,0:50:99:0,144,3605	0/0:48,0:48:99:0,144,3559	0/0:27,0:27:72.20:0,72,1839	0/0:68,0:68:99:0,190,4713	0/0:61,0:61:99:0,171,4316	0/0:60,0:60:99:0,178,4553	0/0:64,0:64:99:0,181,4647	0/0:58,0:58:99:0,163,4133	0/0:36,0:36:71.86:0,72,2275	1/1:4,27:31:14.77:1050,15,0	0/0:27,0:24:66.20:0,66,1440	0/0:38,0:38:99:0,114,3009	0/0:109,0:108:99:0,277,6903	0/0:37,0:37:99:0,102,2560	0/0:30,0:30:87.30:0,87,2274	0/0:51,0:51:99:0,129,3102	0/0:40,0:40:99:0,111,2609	1/1:2,34:36:21.32:1728,21,0	0/0:31,0:31:87.30:0,87,2344	1/1:0,8:8:24.08:455,24,0
chr10	70693100	.	T	TA	5984.02	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-12.553;DP=608;FS=0.000;HRun=7;HaplotypeScore=60.2267;InbreedingCoeff=0.9704;MQ=68.97;MQ0=1;MQRankSum=-2.036;QD=35.62;ReadPosRankSum=3.981;VQSLOD=2.9347;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,42:44:99:1477,108,0	0/0:4,0:4:6.02:0,6,68	0/0:18,0:13:35.99:0,36,385	0/0:23,0:23:9.60:0,10,481	0/0:35,0:35:99:0,105,1186	0/0:20,0:20:60.17:0,60,679	0/0:19,0:19:54.15:0,54,612	0/0:29,0:29:81.21:0,81,908	0/0:15,0:15:45.13:0,45,510	0/0:25,0:25:72.20:0,72,809	0/0:16,0:16:44.74:0,45,509	0/0:15,0:15:42.12:0,42,476	1/1:0,21:21:54.17:738,54,0	0/0:12,0:12:36.10:0,36,408	0/0:23,0:23:66.19:0,66,748	0/0:23,0:23:60.17:0,60,680	0/0:23,0:23:66.19:0,66,748	1/1:2,7:9:18.06:246,18,0	0/0:15,0:15:45.10:0,45,496	0/0:42,0:42:99:0,120,1360	0/0:13,0:13:39.10:0,39,432	0/0:19,0:19:54.15:0,54,612	1/1:0,30:30:75.14:1026,75,0	1/1:1,18:19:54.18:739,54,0	0/0:18,0:18:54.15:0,54,612	1/1:1,28:29:84.28:1143,84,0	0/0:33,0:33:93.23:0,93,1032	1/1:1,15:16:45.15:615,45,0
chr10	70695300	.	C	CGCGT	2025.29	PASS	AB=0.992;AC=10;AF=0.179;AN=56;BaseQRankSum=10.196;DP=714;FS=14.068;HRun=0;HaplotypeScore=135.0317;InbreedingCoeff=0.4902;MQ=56.27;MQ0=7;MQRankSum=-3.338;QD=12.66;ReadPosRankSum=0.984;VQSLOD=2.7953;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:38:99:221,0,134	0/0:17,0:17:45.13:0,45,780	0/0:28,0:13:35.57:0,36,358	0/0:28,0:13:26.96:0,27,351	0/0:15,0:15:42.08:0,42,659	0/0:20,0:20:57.18:0,57,1069	0/0:29,0:29:87.07:0,87,1257	0/0:28,0:28:81.18:0,81,1243	0/0:27,0:27:81.19:0,81,1360	0/0:26,0:26:76.99:0,77,1169	0/0:17,0:17:48.14:0,48,871	0/0:22,0:22:63.13:0,63,1123	1/1:18,9:33:77.94:1222,78,0	0/0:17,0:18:51.10:0,51,796	0/0:24,0:24:63.04:0,63,1100	0/0:26,0:25:75.10:0,75,1148	0/0:39,0:39:99:0,114,1894	0/1:19,0:19:92.61:93,0,98	0/0:30,0:29:78.18:0,78,1230	0/0:23,0:23:69.15:0,69,1138	0/0:59,0:59:99:0,165,2726	0/0:24,0:24:69.21:0,69,1256	1/1:7,2:11:6.45:49,6,0	1/1:20,3:23:7.01:340,7,0	0/0:29,0:29:80.83:0,81,1296	0/1:31,0:31:99:225,0,224	0/0:23,0:22:69.22:0,69,1267	0/1:2,0:2:5.75:30,0,6
chr10	70695316	.	TGA	T	92.29	PASS	AB=0.980;AC=5;AF=0.089;AN=56;BaseQRankSum=7.416;DP=683;FS=9.195;HRun=0;HaplotypeScore=116.8879;InbreedingCoeff=0.2353;MQ=56.19;MQ0=9;MQRankSum=1.631;QD=0.88;ReadPosRankSum=-2.832;VQSLOD=1.1074;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:47,0:45:70.13:70,0,260	0/0:16,0:16:28.87:0,29,502	0/0:19,0:8:5.23:0,5,65	0/0:40,0:16:23.36:0,23,248	0/0:14,0:14:33.05:0,33,424	0/0:20,0:20:48.12:0,48,716	0/0:19,1:20:13.99:0,14,652	0/0:26,0:26:35.56:0,36,608	0/0:28,0:28:75.15:0,75,1049	0/0:23,0:23:27.90:0,28,836	0/0:18,0:18:48.02:0,48,629	0/0:23,1:24:7.44:0,7,666	0/1:30,0:30:13.97:90,0,14	0/1:15,1:16:16.30:16,0,358	0/0:28,0:27:59.86:0,60,962	0/0:20,1:20:16.95:0,17,712	0/0:44,1:44:42.85:0,43,1239	0/0:17,0:17:15.44:0,15,173	0/0:23,0:21:41.28:0,41,529	0/0:21,0:21:56.17:0,56,768	0/0:49,1:50:59.16:0,59,1440	0/0:24,0:24:54.08:0,54,788	1/1:11,0:11:5.54:29,6,0	0/0:20,0:20:1.34:0,1,4	0/0:25,0:25:60.09:0,60,798	0/0:29,0:28:49.06:0,49,375	0/0:24,1:24:25.99:0,26,886	0/0:2,0:2:3.37:0,3,17
chr10	70695329	.	GAGAC	G	1178.73	PASS	AB=0.978;AC=11;AF=0.196;AN=56;BaseQRankSum=11.810;DP=714;FS=17.310;HRun=0;HaplotypeScore=141.3297;InbreedingCoeff=0.6223;MQ=56.13;MQ0=15;MQRankSum=-0.356;QD=7.81;ReadPosRankSum=-3.203;VQSLOD=0.8746;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:44,3:45:41.99:727,42,0	0/0:15,0:15:42.11:0,42,881	0/0:41,0:12:17.66:0,18,234	0/0:65,0:20:28.44:0,28,579	0/0:14,0:14:42.10:0,42,798	0/0:22,0:22:63.36:0,63,1310	0/0:24,0:24:69.11:0,69,1262	0/0:27,0:27:72.02:0,72,1133	0/0:26,0:26:75.21:0,75,1739	0/0:23,0:23:69.18:0,69,1397	0/0:17,0:17:42.11:0,42,899	0/0:25,0:25:71.81:0,72,1383	0/1:31,0:30:49.52:212,0,50	0/0:13,0:13:39.05:0,39,665	0/0:36,0:35:99:0,102,2072	0/0:22,0:21:60.12:0,60,1156	0/0:41,0:40:99:0,111,2514	0/1:13,1:14:5.44:120,0,5	0/0:21,0:20:22.46:0,22,734	0/0:19,0:19:57.17:0,57,1149	0/0:41,0:41:99:0,117,2225	0/0:20,0:20:56.99:0,57,1049	1/1:11,0:11:8.42:50,8,0	1/1:19,1:20:14.16:97,14,0	0/0:28,0:28:72.17:0,72,1415	0/1:26,0:25:26.71:118,0,27	0/0:23,0:22:69.16:0,69,1499	1/1:2,0:2:3.27:14,3,0
chr10	70695331	.	GAC	G	1367.31	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=13.840;DP=716;FS=0.443;HRun=0;HaplotypeScore=115.0457;InbreedingCoeff=0.8507;MQ=56.16;MQ0=14;MQRankSum=1.024;QD=9.37;ReadPosRankSum=-0.676;VQSLOD=3.1973;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:48,0:46:67.80:644,68,0	0/0:16,0:16:45.01:0,45,672	0/0:42,0:11:19.18:0,19,189	0/0:68,0:20:27.43:0,27,459	0/0:16,0:16:47.09:0,47,637	0/0:21,0:21:61.45:0,61,954	0/0:24,0:24:59.70:0,60,1002	0/0:27,0:27:71.47:0,71,918	0/0:28,0:28:84.19:0,84,1353	0/0:23,0:23:52.44:0,52,1058	0/0:17,0:17:34.79:0,35,602	0/0:25,0:25:57.46:0,57,998	1/1:27,1:27:57.28:503,57,0	0/0:15,0:15:28.08:0,28,532	0/0:35,1:36:99:0,105,1518	0/0:20,0:20:46.72:0,47,902	0/0:42,0:41:99:0,101,1777	1/1:13,1:14:12.31:99,12,0	0/0:21,0:20:28.50:0,28,627	0/0:19,0:19:56.80:0,57,856	0/0:40,0:40:99:0,105,1762	0/0:19,0:19:56.02:0,56,866	1/1:10,1:11:9:100,9,0	1/1:18,1:19:14.93:133,15,0	0/0:28,0:28:72.05:0,72,1060	0/1:24,0:23:41.04:45,0,41	0/0:23,0:22:53.85:0,54,1143	1/1:2,0:2:4.98:24,5,0
chr10	70695345	.	CAGAGACA	C	3742.72	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.773;DP=701;FS=19.515;HRun=0;HaplotypeScore=170.0158;InbreedingCoeff=0.9619;MQ=60.83;MQ0=12;MQRankSum=1.200;QD=27.32;ReadPosRankSum=0.471;VQSLOD=1.9502;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:44,0:42:83.83:1423,84,0	0/0:16,0:16:42.14:0,42,1251	0/0:50,0:18:19.82:0,20,482	0/0:71,0:28:55.78:0,56,998	0/0:18,0:18:54.18:0,54,1277	0/0:26,0:26:72.25:0,72,1872	0/0:23,0:23:57.19:0,57,1444	0/0:25,0:25:34.01:0,34,1079	0/0:26,0:26:66.23:0,66,2087	0/0:24,0:24:66.22:0,66,1680	0/0:14,0:14:39.13:0,39,1041	0/0:23,0:23:54.17:0,54,1354	1/1:29,0:28:54.46:750,54,0	0/0:23,0:23:63.21:0,63,1461	0/0:39,0:39:99:0,105,2916	0/0:17,0:17:51.17:0,51,1409	0/0:41,0:41:78.44:0,78,3290	1/1:13,0:13:28.05:327,28,0	0/0:19,0:17:45.12:0,45,1144	0/0:13,0:13:36.12:0,36,1062	0/0:33,0:33:84.29:0,84,2207	0/0:14,0:14:42.14:0,42,1277	1/1:10,0:10:14.86:176,15,0	1/1:18,0:18:18.04:277,18,0	0/0:21,0:21:57.17:0,57,1686	1/1:9,13:22:39.05:716,39,0	0/0:27,0:26:66.22:0,66,1818	1/1:1,0:1:3.01:75,3,0
chr10	70695351	.	CA	C	3233.06	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.684;DP=705;FS=5.178;HRun=2;HaplotypeScore=99.3530;InbreedingCoeff=0.9627;MQ=61.76;MQ0=10;MQRankSum=-2.336;QD=24.68;ReadPosRankSum=2.473;VQSLOD=3.3825;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,41:41:99:1277,99,0	0/0:15,0:15:45.15:0,45,674	0/0:52,0:20:24.40:0,24,520	0/0:72,0:29:63.99:0,64,866	0/0:20,0:20:60.18:0,60,861	0/0:30,0:30:84.28:0,84,1236	0/0:23,0:23:66.22:0,66,983	0/0:27,0:28:42.32:0,42,1062	0/0:25,0:25:72.23:0,72,1054	0/0:27,0:27:81.26:0,81,1177	0/0:18,0:18:51.13:0,51,722	0/0:21,0:21:60.18:0,60,859	1/1:2,26:28:70.78:896,71,0	0/0:22,0:22:63.21:0,63,944	0/0:37,0:37:99:0,108,1546	0/0:18,0:18:54.18:0,54,804	0/0:41,1:42:87.46:0,87,1742	1/1:0,12:12:33.11:425,33,0	0/0:19,0:18:51.17:0,51,756	0/0:14,0:14:39.13:0,39,584	0/0:29,0:29:87.29:0,87,1289	0/0:17,0:17:48.16:0,48,718	1/1:1,8:9:14.97:195,15,0	1/1:3,16:19:18.04:234,18,0	0/0:21,0:21:60.17:0,60,859	1/1:15,4:19:38.42:379,38,0	0/0:24,0:24:72.23:0,72,1049	1/1:0,1:1:2.94:18,3,0
chr10	70697007	.	T	TA	574.79	PASS	AC=12;AF=0.240;AN=50;BaseQRankSum=2.787;DP=221;FS=2.190;HRun=10;HaplotypeScore=30.7666;InbreedingCoeff=0.8009;MQ=55.68;MQ0=5;MQRankSum=0.194;QD=16.42;ReadPosRankSum=-0.058;VQSLOD=3.1244;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,7:9:15.04:160,15,0	0/0:7,0:7:17.98:0,18,148	0/0:8,0:6:14.82:0,15,107	./.	0/0:15,1:17:11.96:0,12,288	0/0:14,0:14:32.95:0,33,271	0/0:2,0:2:5.99:0,6,49	0/0:18,0:18:40.98:0,41,324	0/0:8,0:8:18.85:0,19,150	0/0:9,0:9:26.97:0,27,222	0/0:11,0:11:29.96:0,30,246	0/0:4,0:4:8.97:0,9,71	1/1:3,0:4:2.84:15,3,0	0/0:7,0:7:14.97:0,15,123	0/0:8,0:8:20.97:0,21,172	0/0:7,0:7:17.97:0,18,148	0/0:15,0:13:32.94:0,33,271	1/1:1,9:10:27.07:288,27,0	0/0:5,0:5:11.97:0,12,98	0/0:14,0:14:29.93:0,30,246	./.	0/0:1,0:1:3:0,3,25	./.	1/1:0,0:2:2.84:14,3,0	0/0:14,0:14:32.94:0,33,271	1/1:0,7:7:18.05:192,18,0	0/0:14,0:13:41.95:0,42,345	1/1:0,2:2:6.02:64,6,0
chr10	70697295	.	C	CA	3066.52	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=3.900;DP=435;FS=5.840;HRun=4;HaplotypeScore=46.0329;InbreedingCoeff=0.9811;MQ=74.42;MQ0=0;MQRankSum=-0.893;QD=34.07;ReadPosRankSum=1.818;VQSLOD=4.1042;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:11:30.10:408,30,0	0/0:9,0:9:24.07:0,24,272	0/0:14,0:12:20.31:0,20,291	0/0:11,0:11:26.97:0,27,274	0/0:24,0:24:66.17:0,66,738	0/0:13,0:13:36.10:0,36,408	0/0:7,0:7:21.06:0,21,238	0/0:38,0:38:90.23:0,90,1005	0/0:15,0:15:45.13:0,45,510	0/0:23,0:23:60.17:0,60,681	0/0:17,0:17:48.14:0,48,544	0/0:19,0:19:51.13:0,51,569	1/1:0,14:14:39.13:534,39,0	0/0:14,0:14:39.11:0,39,442	0/0:19,0:19:51.13:0,51,568	0/0:13,0:13:39.11:0,39,442	0/0:23,0:23:69.20:0,69,781	1/1:1,22:23:60.20:820,60,0	0/0:21,0:21:42.11:0,42,477	0/0:11,0:11:21.04:0,21,229	0/0:5,0:5:14.98:0,15,145	0/0:5,0:5:15.03:0,15,160	1/1:0,6:6:15.05:205,15,0	1/1:0,6:6:12.04:164,12,0	0/0:16,0:16:48.14:0,48,545	1/1:0,22:22:66.21:886,66,0	0/0:28,0:28:81.23:0,81,918	1/1:2,6:8:18.06:246,18,0
chr10	70697610	.	CAGA	C	1833.24	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.177;DP=572;FS=1.263;HRun=0;HaplotypeScore=90.6529;InbreedingCoeff=0.9987;MQ=81.93;MQ0=0;MQRankSum=-2.314;QD=39.01;ReadPosRankSum=1.511;VQSLOD=4.8020;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.31:0,90,2010	0/0:8,0:8:24.08:0,24,536	0/0:21,0:21:51.17:0,51,1053	0/0:14,0:14:33.94:0,34,745	0/0:25,0:25:75.26:0,75,1658	0/0:19,0:19:54.19:0,54,1175	0/0:14,0:14:42.14:0,42,937	0/0:48,0:48:99:0,129,2833	0/0:17,0:17:45.15:0,45,1005	0/0:31,0:31:90.31:0,90,1963	0/0:21,0:21:60.19:0,60,1298	0/0:15,0:15:45.15:0,45,1004	1/1:1,11:12:30.10:490,30,0	0/0:14,0:14:39.13:0,39,870	0/0:22,0:22:63.20:0,63,1365	0/0:21,0:21:63.22:0,63,1407	0/0:14,0:14:39.13:0,39,841	0/0:12,0:12:29.62:0,30,669	0/0:14,0:14:42.14:0,42,939	0/0:26,0:26:78.27:0,78,1737	0/0:22,0:22:60.16:0,60,1272	0/0:14,0:14:39.13:0,39,853	1/1:2,18:20:54.18:850,54,0	1/1:0,15:15:39.13:637,39,0	0/0:22,0:22:66.23:0,66,1475	0/0:30,0:30:87.30:0,87,1944	0/0:32,0:32:90.31:0,90,2009	0/0:17,0:17:48.16:0,48,1072
chr10	70698618	.	A	AG	6645.56	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-14.792;DP=728;FS=9.282;HRun=2;HaplotypeScore=68.2982;InbreedingCoeff=0.9970;MQ=76.57;MQ0=0;MQRankSum=-2.052;QD=40.52;ReadPosRankSum=3.710;VQSLOD=4.8051;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:87.29:1303,87,0	0/0:13,0:13:39.11:0,39,492	0/0:31,0:26:78.20:0,78,934	0/0:26,0:22:52.83:0,53,638	0/0:41,0:41:99:0,120,1514	0/0:33,0:33:90.29:0,90,1168	0/0:29,0:29:84.25:0,84,1064	0/0:27,0:27:78.23:0,78,977	0/0:23,0:23:69.17:0,69,837	0/0:24,0:24:69.21:0,69,875	0/0:20,0:20:60.19:0,60,778	0/0:23,0:23:69.20:0,69,869	1/1:0,24:24:66.22:988,66,0	0/0:30,0:30:87.27:0,87,1098	0/0:20,0:20:57.17:0,57,726	0/0:25,0:25:72.21:0,72,909	0/0:23,0:23:69.18:0,69,876	1/1:1,10:11:30.10:449,30,0	0/0:25,0:25:72.19:0,72,881	0/0:34,0:34:99:0,99,1240	0/0:26,0:26:75.21:0,75,942	0/0:28,0:28:81.24:0,81,1024	1/1:2,29:31:78.18:1138,78,0	1/1:1,22:23:60.20:899,60,0	0/0:26,0:26:66.20:0,66,832	1/1:1,38:39:78.42:1645,78,0	0/0:37,0:36:99:0,111,1372	1/1:1,5:6:15.05:224,15,0
chr10	70700579	.	CT	C	1690.35	PASS	AB=0.887;AC=16;AF=0.286;AN=56;BaseQRankSum=11.775;DP=608;FS=0.773;HRun=12;HaplotypeScore=70.9546;InbreedingCoeff=0.8050;MQ=68.56;MQ0=2;MQRankSum=-0.756;QD=9.09;ReadPosRankSum=3.290;VQSLOD=2.9289;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:41:69.25:200,69,0	0/1:5,1:6:8.18:8,0,107	0/0:10,2:11:20.80:0,21,186	0/0:9,0:7:5.57:0,6,31	0/0:25,2:28:36.65:0,37,520	0/0:34,0:35:86.99:0,87,860	0/1:20,2:22:7.42:7,0,284	0/0:26,2:28:7.63:0,8,436	0/0:18,0:18:39:0,39,377	0/0:20,0:20:51.10:0,51,518	0/0:23,0:23:57.09:0,57,567	0/0:21,0:21:45.08:0,45,450	1/1:3,17:20:41.83:325,42,0	0/0:17,0:17:42.06:0,42,415	0/0:34,0:35:92.97:0,93,901	0/0:16,0:17:44.92:0,45,441	0/0:24,0:24:36.07:0,36,366	1/1:1,0:19:32.59:94,33,0	0/0:20,1:22:30.67:0,31,465	0/0:19,0:19:32.15:0,32,498	0/0:20,0:19:45.08:0,45,452	0/0:18,2:20:24.81:0,25,417	1/1:4,24:27:59.43:464,59,0	1/1:2,19:22:52.84:401,53,0	0/0:23,2:26:13.46:0,13,476	1/1:8,14:22:14.36:294,14,0	0/0:25,2:27:39.87:0,40,574	1/1:0,4:4:11.95:93,12,0
chr10	70701566	.	TACAC	T	473.73	PASS	AB=0.869;AC=13;AF=0.250;AN=52;BaseQRankSum=5.336;DP=439;FS=0.000;HRun=0;HaplotypeScore=75.8846;InbreedingCoeff=0.3965;MQ=53.52;MQ0=10;MQRankSum=-3.891;QD=3.29;ReadPosRankSum=0.985;VQSLOD=0.9735;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,11:41:8.54:241,9,0	0/0:8,0:8:15.05:0,15,282	./.	./.	0/0:19,0:23:23.79:0,24,434	0/0:17,0:16:21.89:0,22,354	0/0:13,0:13:12.02:0,12,236	0/0:15,0:15:5.99:0,6,92	0/0:13,0:14:14.76:0,15,219	0/1:9,1:10:22.64:23,0,256	0/0:15,0:15:11.15:0,11,167	0/1:20,0:21:1.78:2,0,386	1/1:4,1:5:3.01:47,3,0	0/0:8,0:8:6.02:0,6,141	0/0:14,0:15:32.80:0,33,602	0/0:11,0:11:30.10:0,30,664	0/0:23,0:24:30.49:0,30,586	0/1:18,0:20:46.75:47,0,48	0/0:16,0:16:16.34:0,16,227	0/0:12,0:12:21.07:0,21,487	0/0:20,0:20:18.05:0,18,359	0/0:5,0:5:3.01:0,3,71	0/1:8,1:9:3.08:40,0,3	1/1:11,3:14:6.02:93,6,0	0/0:25,0:24:35.84:0,36,673	0/1:10,0:16:9.04:71,0,9	0/0:9,0:10:17.42:0,17,340	1/1:3,0:6:7.82:61,8,0
chr10	70701639	.	T	TA	310.58	PASS	AB=0.763;AC=6;AF=0.107;AN=56;BaseQRankSum=-1.029;DP=406;FS=0.000;HRun=9;HaplotypeScore=49.7960;InbreedingCoeff=0.5730;MQ=73.02;MQ0=5;MQRankSum=1.935;QD=6.21;ReadPosRankSum=-1.502;VQSLOD=-0.0879;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:80.96:0,81,698	0/0:7,0:7:14.99:0,15,130	0/1:23,2:14:18.43:18,0,74	0/0:16,0:7:5.14:0,5,37	0/0:28,0:28:65.92:0,66,566	0/0:18,0:18:38.94:0,39,333	0/0:14,0:14:32.98:0,33,283	0/0:24,0:24:53.96:0,54,462	0/0:10,0:10:26.98:0,27,234	0/0:11,0:11:32.99:0,33,284	0/0:14,0:14:35.94:0,36,302	0/0:13,0:13:29.98:0,30,260	0/1:3,6:9:4.99:176,0,5	0/0:13,0:14:41:0,41,338	0/0:15,0:15:44.99:0,45,390	0/0:11,0:11:32.95:0,33,278	0/0:22,0:22:56.96:0,57,491	0/0:12,0:12:29.98:0,30,260	0/0:21,0:21:47.97:0,48,414	0/0:8,0:8:24:0,24,208	0/0:14,0:14:38.96:0,39,331	0/0:4,0:4:9:0,9,78	1/1:5,4:9:14.98:144,15,0	1/1:1,6:7:8.79:99,9,0	0/0:17,0:17:44.46:0,44,366	0/0:11,0:11:26.97:0,27,230	0/0:15,0:15:41.99:0,42,364	0/0:4,0:4:5.02:0,5,32
chr10	70702283	.	GCAT	G	8825.83	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.720;DP=691;FS=4.350;HRun=0;HaplotypeScore=97.9408;InbreedingCoeff=0.9994;MQ=74.59;MQ0=0;MQRankSum=-5.089;QD=45.03;ReadPosRankSum=3.226;VQSLOD=6.8638;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:44:99:2117,120,0	0/0:12,0:12:36.12:0,36,851	0/0:14,0:14:36.08:0,36,788	0/0:13,0:13:30.10:0,30,694	0/0:16,0:16:48.15:0,48,1079	0/0:23,0:23:69.22:0,69,1586	0/0:26,0:26:75.24:0,75,1722	0/0:30,0:30:81.28:0,81,1916	0/0:30,0:30:90.31:0,90,2101	0/0:12,0:12:36.12:0,36,852	0/0:17,0:17:48.15:0,48,1089	0/0:29,0:29:84.29:0,84,1971	1/1:3,37:40:99:1846,105,0	0/0:32,1:33:46.40:0,46,2185	0/0:44,0:44:99:0,132,3097	0/0:25,0:25:75.24:0,75,1726	0/0:40,0:40:99:0,114,2650	1/1:2,18:20:48.16:847,48,0	0/0:17,0:17:40.38:0,40,861	0/0:24,0:24:69.24:0,69,1576	0/0:29,0:29:83.99:0,84,1960	0/0:18,0:18:54.17:0,54,1229	1/1:1,15:16:42.14:740,42,0	1/1:1,46:47:99:1798,102,0	0/0:21,0:21:63.22:0,63,1489	1/1:1,20:21:60.21:1055,60,0	0/0:22,0:22:66.23:0,66,1557	1/1:0,8:8:24.08:423,24,0
chr10	70703287	.	AT	A	2015.41	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=10.196;DP=457;FS=1.517;HRun=8;HaplotypeScore=46.5692;InbreedingCoeff=0.8356;MQ=74.02;MQ0=0;MQRankSum=-0.460;QD=22.90;ReadPosRankSum=2.364;VQSLOD=3.9934;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:84.13:811,84,0	0/0:9,0:9:27.08:0,27,326	0/0:17,0:13:7.02:0,7,167	0/0:10,0:11:13.22:0,13,130	0/0:24,0:24:69.21:0,69,833	0/0:15,0:15:36.07:0,36,409	0/0:12,0:12:30.08:0,30,350	0/0:35,0:35:87.23:0,87,1011	0/1:5,0:5:2.53:3,0,130	0/0:16,0:16:42.12:0,42,487	0/0:19,0:19:48.15:0,48,580	0/0:8,0:8:18.06:0,18,217	0/0:15,0:15:36.10:0,36,419	0/0:11,0:11:30.09:0,30,362	0/0:7,0:7:21.06:0,21,254	0/0:14,0:14:36.10:0,36,423	0/0:30,0:30:75.23:0,75,906	1/1:0,20:20:54.09:521,54,0	0/0:26,0:26:63.18:0,63,750	0/0:26,0:26:49.39:0,49,799	0/0:5,0:5:12.02:0,12,133	0/0:3,0:3:6.02:0,6,72	0/0:8,0:8:24.07:0,24,280	0/0:6,0:6:15.03:0,15,169	0/0:35,0:35:99:0,102,1222	1/1:0,21:21:63.07:596,63,0	0/0:17,0:17:45.13:0,45,532	1/1:1,9:10:10.74:241,11,0
chr10	70706867	.	C	CG	779.15	PASS	AB=0.971;AC=10;AF=0.179;AN=56;BaseQRankSum=10.099;DP=515;FS=11.599;HRun=0;HaplotypeScore=91.2796;InbreedingCoeff=0.7497;MQ=79.43;MQ0=1;MQRankSum=-0.886;QD=6.83;ReadPosRankSum=5.899;VQSLOD=2.6358;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:22:8.24:8,0,53	0/0:3,0:3:9.02:0,9,106	0/0:19,0:18:50.54:0,51,547	0/0:14,0:14:13.64:0,14,277	0/0:21,0:21:48.51:0,49,521	0/0:24,0:24:66.07:0,66,769	0/0:21,0:21:63.14:0,63,799	0/0:20,0:20:50.88:0,51,569	0/0:17,0:17:38.99:0,39,489	0/0:11,0:11:24.06:0,24,289	0/0:6,0:6:18.06:0,18,237	0/0:22,0:22:57.04:0,57,672	1/1:16,0:16:34.30:217,34,0	0/0:18,0:18:45.03:0,45,520	0/0:19,0:19:51.06:0,51,576	0/0:19,0:19:50.81:0,51,560	0/0:25,0:25:75.17:0,75,973	0/0:9,0:19:27.42:0,27,100	0/0:16,0:16:45.08:0,45,522	0/0:9,0:9:26.98:0,27,261	0/0:29,0:29:81.07:0,81,913	0/0:26,0:26:69.13:0,69,835	1/1:15,0:15:36.73:232,37,0	1/1:36,0:36:81.66:445,82,0	0/0:22,0:22:57.35:0,57,641	0/1:15,1:16:3.65:12,0,4	0/0:21,0:21:60.10:0,60,716	1/1:0,9:9:2.99:24,3,0
chr10	70706872	.	G	GC	2039.76	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.006;DP=437;FS=7.469;HRun=0;HaplotypeScore=65.6486;InbreedingCoeff=0.8920;MQ=80.47;MQ0=1;MQRankSum=0.142;QD=31.87;ReadPosRankSum=5.855;VQSLOD=2.9703;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:35.53:0,36,341	0/0:2,0:2:5.96:0,6,46	0/0:19,0:18:35.14:0,35,397	0/0:13,0:13:22.19:0,22,224	0/0:19,0:19:48.22:0,48,470	0/0:18,0:18:51.03:0,51,572	0/0:21,0:21:51.06:0,51,594	0/0:22,0:22:53.96:0,54,545	0/0:13,0:13:36.54:0,37,449	0/0:11,0:11:26.93:0,27,264	0/0:8,0:8:23.96:0,24,237	0/0:18,0:18:46.60:0,47,512	1/1:1,15:16:35.97:486,36,0	0/0:13,0:13:32.59:0,33,413	0/0:13,0:13:36.05:0,36,432	0/0:13,0:13:36.07:0,36,462	0/0:20,0:20:60.08:0,60,741	0/0:19,0:19:51.06:0,51,493	0/0:14,0:14:36.03:0,36,413	0/0:4,0:4:11.97:0,12,112	0/0:23,0:23:57.01:0,57,607	0/0:18,0:18:45.09:0,45,575	1/1:0,15:15:39.11:516,39,0	1/1:0,33:33:87.29:1180,87,0	0/0:21,0:21:53.25:0,53,555	0/0:14,0:14:14.91:0,15,89	0/0:15,0:15:44.97:0,45,493	0/0:6,0:6:3.21:0,3,42
chr10	70708524	.	C	CGTCTT	10769.25	PASS	AB=0.542;AC=13;AF=0.232;AN=56;BaseQRankSum=-3.091;DP=700;FS=0.362;HRun=0;HaplotypeScore=134.5745;InbreedingCoeff=0.8870;MQ=85.31;MQ0=1;MQRankSum=-12.353;QD=66.48;ReadPosRankSum=1.065;VQSLOD=5.4447;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:29:60.21:1834,60,0	0/0:7,0:7:21.03:0,21,337	0/0:22,0:22:31.40:0,31,1151	0/0:28,0:27:61.58:0,62,1332	0/0:19,0:19:51.16:0,51,1013	0/0:30,0:30:75.24:0,75,1535	0/0:31,0:31:90.23:0,90,1732	0/0:40,0:40:99:0,111,2149	0/0:31,0:31:87.30:0,87,1800	0/0:23,0:23:66.22:0,66,1339	0/0:17,0:17:51.13:0,51,1011	0/0:32,0:32:81.22:0,81,1615	1/1:2,30:33:81.22:2485,81,0	0/0:33,0:33:96.27:0,96,1892	0/0:30,0:30:84.27:0,84,1702	0/0:21,0:21:57.20:0,57,1181	0/0:15,0:15:45.15:0,45,942	1/1:1,17:19:45.15:1392,45,0	0/0:21,0:21:60.17:0,60,1199	0/0:23,0:23:60.12:0,60,1153	0/0:53,0:53:99:0,147,2933	0/0:15,0:15:45.15:0,45,942	1/1:1,14:17:28.34:919,28,0	1/1:2,24:27:57.20:1760,57,0	0/0:20,0:20:51.11:0,51,986	0/1:5,24:32:95.17:2101,0,95	0/0:27,0:27:63.16:0,63,1277	1/1:0,4:4:9.03:278,9,0
chr10	70710678	.	C	CTA	1294.98	PASS	AB=0.583;AC=5;AF=0.089;AN=56;BaseQRankSum=10.057;DP=657;FS=0.000;HRun=0;HaplotypeScore=95.3422;InbreedingCoeff=0.7772;MQ=82.01;MQ0=0;MQRankSum=-9.428;QD=30.12;ReadPosRankSum=2.611;VQSLOD=5.5232;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,2087	0/0:6,0:6:18.06:0,18,291	0/0:16,0:17:42.13:0,42,651	0/0:28,0:28:75.13:0,75,1025	0/0:27,0:27:81.23:0,81,1245	0/0:22,0:22:66.23:0,66,1076	0/0:24,0:24:72.25:0,72,1174	0/0:28,0:28:84.25:0,84,1257	0/0:17,0:17:51.17:0,51,831	0/0:22,0:22:63.10:0,63,953	0/0:20,0:20:54.17:0,54,838	0/0:27,0:27:78.21:0,78,1168	1/1:3,19:22:63.19:818,63,0	0/0:31,0:31:93.32:0,93,1509	0/0:32,0:32:93.30:0,93,1489	0/0:28,0:28:81.24:0,81,1269	0/0:37,0:37:99:0,111,1803	0/0:22,0:22:63.20:0,63,1001	0/0:21,0:21:54.16:0,54,849	0/0:32,0:32:96.33:0,96,1557	0/0:25,0:25:69.20:0,69,1074	0/0:21,0:21:60.20:0,60,973	1/1:2,5:7:21.06:278,21,0	0/1:4,10:14:22.06:327,0,22	0/0:22,0:22:63.18:0,63,978	0/0:25,0:25:75.17:0,75,1149	0/0:23,0:23:69.19:0,69,1070	0/0:13,0:13:39.13:0,39,630
chr10	70710679	.	C	CTGGAACAGAG	6533.72	PASS	AB=0.643;AC=5;AF=0.089;AN=56;BaseQRankSum=10.717;DP=679;FS=1.802;HRun=0;HaplotypeScore=200.0478;InbreedingCoeff=0.7776;MQ=82.11;MQ0=0;MQRankSum=-10.980;QD=112.65;ReadPosRankSum=1.319;VQSLOD=5.4257;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,4520	0/0:6,0:6:18.06:0,18,629	0/0:18,0:18:42.14:0,42,1317	0/0:29,0:29:75.26:0,75,2223	0/0:27,0:27:81.28:0,81,2698	0/0:23,0:23:66.23:0,66,2263	0/0:26,0:26:72.25:0,72,2464	0/0:25,0:25:72.22:0,72,2271	0/0:17,0:17:51.18:0,51,1739	0/0:22,0:22:60.20:0,60,1858	0/0:21,0:21:54.17:0,54,1718	0/0:26,0:26:78.24:0,78,2480	1/1:4,19:23:68.89:2968,69,0	0/0:32,0:32:93.32:0,93,3248	0/0:32,0:32:96.31:0,96,3099	0/0:28,0:28:84.27:0,84,2681	0/0:38,0:38:99:0,111,3801	0/0:21,0:21:60.21:0,60,1988	0/0:21,0:21:59.92:0,60,1847	0/0:33,0:33:96.32:0,96,3276	0/0:24,0:24:66.23:0,66,2181	0/0:21,0:21:63.21:0,63,2007	1/1:12,5:17:38.83:1637,39,0	0/1:8,10:18:59.72:1928,0,60	0/0:25,0:25:66.20:0,66,2069	0/0:26,0:26:75.26:0,75,2405	0/0:23,0:23:69.24:0,69,2369	0/0:13,0:13:39.13:0,39,1226
chr10	70711352	.	CCTCT	C	1681.33	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.177;DP=785;FS=0.000;HRun=0;HaplotypeScore=160.4961;InbreedingCoeff=0.9725;MQ=63.71;MQ0=4;MQRankSum=-5.563;QD=22.42;ReadPosRankSum=0.570;VQSLOD=3.4603;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,111,2603	0/0:9,0:9:24.07:0,24,538	0/0:51,0:31:49.58:0,50,1016	0/0:58,0:39:65.60:0,66,1464	0/0:24,0:25:63:0,63,1458	0/0:25,0:25:63.20:0,63,1490	0/0:31,0:32:69.01:0,69,1618	0/0:38,0:39:84.08:0,84,1830	0/0:21,0:21:60.21:0,60,1457	0/0:26,0:28:72.03:0,72,1667	0/0:18,0:18:54.19:0,54,1316	0/0:34,0:36:81:0,81,1916	1/1:4,21:25:45.12:754,45,0	0/0:26,0:27:62.98:0,63,1430	0/0:32,0:32:84.29:0,84,2060	0/0:25,0:27:65.80:0,66,1494	0/0:31,0:32:87.09:0,87,1995	0/0:28,0:27:75.23:0,75,1694	0/0:11,0:11:18.05:0,18,375	0/0:20,0:20:39.60:0,40,871	0/0:41,0:42:99:0,105,2395	0/0:24,0:24:53.96:0,54,1140	1/1:5,9:14:17.12:244,17,0	1/1:7,28:36:50.62:824,51,0	0/0:19,0:19:42.14:0,42,988	0/0:30,0:30:78.27:0,78,1900	0/0:25,0:27:66.01:0,66,1526	0/0:6,0:5:9.03:0,9,224
chr10	70711392	.	TCA	T	856.88	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.054;DP=920;FS=17.708;HRun=0;HaplotypeScore=148.2900;InbreedingCoeff=0.9316;MQ=63.15;MQ0=9;MQRankSum=-0.090;QD=10.32;ReadPosRankSum=-0.607;VQSLOD=2.3162;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:75.24:0,75,1241	0/0:10,0:10:24.08:0,24,398	0/0:74,1:35:6.19:0,6,917	0/0:72,0:35:65.89:0,66,819	0/0:30,1:31:43.41:0,43,1255	0/0:30,0:30:72.23:0,72,1156	0/0:36,0:36:34.37:0,34,1050	0/0:40,0:40:93.30:0,93,1463	0/0:29,0:29:81.26:0,81,1315	0/0:36,0:36:84.29:0,84,1376	0/0:22,1:23:10.29:0,10,636	0/0:32,0:32:75.26:0,75,1237	1/1:6,21:26:42.09:505,42,0	0/0:26,1:27:25.30:0,25,916	0/0:34,0:34:93.30:0,93,1502	0/0:31,0:31:69.23:0,69,1135	0/0:41,0:41:99:0,111,1815	0/0:24,0:23:48.40:0,48,921	0/0:16,0:16:42.02:0,42,629	0/0:20,1:21:25.35:0,25,959	0/0:64,0:64:99:0,147,2373	0/0:30,0:30:81.27:0,81,1311	1/1:1,16:17:15.05:190,15,0	1/1:13,26:39:23.46:302,23,0	0/0:23,0:23:60.20:0,60,974	0/0:32,0:32:81.25:0,81,1307	0/0:24,0:24:54.18:0,54,891	0/0:4,0:4:12.04:0,12,199
chr10	70711446	.	T	TCA	2596.39	PASS	AB=0.814;AC=8;AF=0.143;AN=56;BaseQRankSum=-6.632;DP=892;FS=5.429;HRun=0;HaplotypeScore=132.0401;InbreedingCoeff=0.7156;MQ=57.22;MQ0=16;MQRankSum=2.961;QD=15.55;ReadPosRankSum=1.269;VQSLOD=3.6729;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,40:47:69.24:1118,69,0	0/0:14,0:14:36.07:0,36,423	0/0:53,0:24:21.06:0,21,252	0/1:57,0:29:10.31:10,0,252	0/0:25,0:25:60.18:0,60,720	0/0:24,0:24:69.20:0,69,829	0/0:41,1:43:28.58:0,29,946	0/0:36,0:35:63.17:0,63,754	0/0:22,0:22:51.16:0,51,623	0/0:34,0:34:81.25:0,81,980	0/0:20,0:20:48.15:0,48,586	0/0:34,0:34:84.26:0,84,1025	0/0:24,0:25:49.99:0,50,377	0/0:26,0:26:62.68:0,63,741	0/0:31,0:31:75.06:0,75,909	0/0:35,0:35:92.77:0,93,1096	0/0:39,0:39:92.49:0,92,1135	0/1:9,11:19:34.22:268,0,34	0/0:22,0:19:28.34:0,28,348	0/0:19,0:19:42.12:0,42,501	0/0:77,0:77:99:0,180,2124	0/0:38,0:38:76.46:0,76,906	0/0:14,0:14:20.84:0,21,162	0/0:35,0:36:57.99:0,58,441	0/0:29,0:30:81.09:0,81,967	1/1:11,20:30:32.78:944,33,0	0/0:24,0:23:69.14:0,69,801	1/1:1,7:9:27.09:409,27,0
chr10	70711460	.	A	AT	1030.03	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.977;DP=912;FS=0.492;HRun=0;HaplotypeScore=119.5225;InbreedingCoeff=0.9991;MQ=56.81;MQ0=18;MQRankSum=1.978;QD=12.26;ReadPosRankSum=0.583;VQSLOD=4.4674;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,101,908	0/0:14,0:14:42.14:0,42,584	0/0:56,0:18:48.13:0,48,662	0/0:59,0:27:69.05:0,69,853	0/0:24,0:24:72.24:0,72,1001	0/0:28,0:28:81.27:0,81,1126	0/0:44,0:44:99:0,117,1506	0/0:37,0:36:99:0,102,1415	0/0:21,0:21:54.18:0,54,754	0/0:32,0:32:96.32:0,96,1339	0/0:22,0:22:59.79:0,60,834	0/0:35,0:35:99:0,105,1441	1/1:20,6:28:46.30:338,46,0	0/0:26,0:26:64.75:0,65,1027	0/0:34,0:34:96.29:0,96,1305	0/0:42,0:41:99:0,111,1515	0/0:38,0:38:99:0,109,1470	0/0:15,0:15:26.82:0,27,219	0/0:20,0:17:51.16:0,51,691	0/0:23,0:23:54.18:0,54,749	0/0:79,0:77:99:0,210,2825	0/0:33,0:33:93.24:0,93,1223	1/1:12,3:17:32.09:252,32,0	1/1:28,9:38:67.47:584,67,0	0/0:28,0:28:83.95:0,84,1143	0/0:31,0:29:83.86:0,84,797	0/0:24,0:22:72.24:0,72,1005	0/0:9,0:9:26.81:0,27,209
chr10	70711462	.	AT	A	757.85	PASS	AB=0.871;AC=6;AF=0.107;AN=56;BaseQRankSum=11.559;DP=900;FS=0.565;HRun=1;HaplotypeScore=117.2577;InbreedingCoeff=0.6633;MQ=58.12;MQ0=18;MQRankSum=-0.159;QD=5.34;ReadPosRankSum=0.546;VQSLOD=0.2687;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:95.32:0,95,919	0/0:14,0:14:39.13:0,39,623	0/0:52,2:17:48.15:0,48,738	0/1:52,5:29:16.98:17,0,754	0/0:25,0:25:75.24:0,75,1168	0/0:28,0:28:81.20:0,81,1218	0/0:42,1:43:80.27:0,80,1730	0/0:36,0:35:99:0,102,1628	0/0:21,0:21:57.19:0,57,911	0/0:33,0:33:99:0,99,1537	0/0:21,0:21:63.21:0,63,1003	0/0:36,0:36:99:0,105,1653	0/1:21,6:26:7.60:145,0,8	0/0:25,0:25:74.91:0,75,1134	0/0:32,2:34:96.29:0,96,1532	0/0:42,0:41:99:0,114,1763	0/0:39,0:39:97.99:0,98,1726	0/0:15,0:15:25.49:0,25,212	0/0:22,0:20:60.14:0,60,866	0/0:22,0:22:54.17:0,54,837	0/0:78,0:76:99:0,205,3196	0/0:30,0:30:83.87:0,84,1301	1/1:14,3:17:28.86:259,29,0	1/1:29,9:38:42.29:473,42,0	0/0:28,0:28:84.28:0,84,1320	0/0:27,1:26:52.39:0,52,591	0/0:24,0:22:72.17:0,72,1095	0/0:9,0:9:26.79:0,27,212
chr10	70714409	.	A	ATG	3956.92	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.833;DP=966;FS=2.629;HRun=0;HaplotypeScore=139.5094;InbreedingCoeff=0.9982;MQ=67.60;MQ0=3;MQRankSum=0.047;QD=38.79;ReadPosRankSum=3.090;VQSLOD=5.1744;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:31.82:0,32,489	0/0:17,0:17:48.15:0,48,669	0/0:22,0:18:25.76:0,26,325	0/0:20,0:16:23.05:0,23,233	0/0:29,0:29:87.28:0,87,1225	0/0:31,0:31:81.24:0,81,1122	0/0:16,0:17:48.12:0,48,627	0/0:49,0:49:99:0,141,1902	0/0:45,0:45:99:0,129,1770	0/0:65,0:65:99:0,181,2491	0/0:28,0:28:78.18:0,78,1007	0/0:41,0:41:99:0,117,1615	1/1:2,50:53:99:2143,117,0	0/0:49,0:49:99:0,132,1831	0/0:53,0:53:99:0,147,2031	0/0:49,0:49:99:0,138,1830	0/0:16,0:16:45.10:0,45,603	0/0:12,0:12:30.08:0,30,410	0/0:17,0:16:42.13:0,42,584	0/0:21,0:21:57.16:0,57,778	0/0:53,0:53:99:0,147,1963	0/0:53,0:53:99:0,159,2163	1/1:1,31:32:57.20:1045,57,0	1/1:2,15:17:42.14:770,42,0	0/0:29,0:29:84.27:0,84,1181	0/0:56,0:56:99:0,165,2242	0/0:42,0:42:99:0,120,1695	0/0:17,0:17:51.12:0,51,706
chr10	70714632	.	ACATGTTCATATGCATATATGAACATG	A	6935.72	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=11.085;DP=1028;FS=3.644;HRun=0;HaplotypeScore=641.1336;InbreedingCoeff=0.8218;MQ=60.95;MQ0=3;MQRankSum=-5.310;QD=63.63;ReadPosRankSum=2.753;VQSLOD=0.5777;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,16:26:11.83:803,12,0	0/0:19,0:19:54.19:0,54,5187	0/1:8,0:8:6.59:7,0,29	0/0:5,0:4:6.02:0,6,117	0/0:33,0:33:93.28:0,93,8370	0/0:34,0:33:99:0,102,9820	0/0:39,0:39:99:0,114,8685	0/0:47,0:47:99:0,135,10492	0/0:50,0:50:99:0,151,14280	0/0:57,0:57:99:0,169,15188	0/0:30,0:30:84.27:0,84,8177	0/0:61,0:61:99:0,175,16172	0/0:47,0:47:99:0,138,12470	0/0:48,0:48:99:0,141,13170	0/0:75,0:75:99:0,223,20750	0/0:45,0:45:99:0,126,11088	0/0:20,0:20:60.21:0,60,5267	1/1:7,10:17:5.60:421,6,0	0/0:26,0:24:67.47:0,67,5719	0/0:35,0:35:99:0,99,9277	0/0:68,0:68:99:0,205,18942	0/0:53,0:53:99:0,141,14944	0/0:31,0:31:90.31:0,90,8293	0/0:27,0:27:81.28:0,81,7118	0/0:29,0:29:81.28:0,81,7819	1/1:9,33:41:90.27:4442,90,0	0/0:40,0:40:99:0,114,11230	1/1:5,10:15:18.06:1263,18,0
chr10	70716978	.	AG	A	2266.15	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.002;DP=771;FS=3.518;HRun=3;HaplotypeScore=90.9311;InbreedingCoeff=0.9994;MQ=82.69;MQ0=0;MQRankSum=-10.294;QD=30.62;ReadPosRankSum=-0.369;VQSLOD=3.1883;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,144,2033	0/0:10,0:10:30.10:0,30,432	0/0:29,0:29:83.74:0,84,1036	0/0:18,0:18:35.65:0,36,646	0/0:29,0:29:87.29:0,87,1250	0/0:20,0:20:60.19:0,60,839	0/0:25,0:25:72.02:0,72,960	0/0:35,0:35:99:0,99,1391	0/0:26,0:26:75.24:0,75,1059	0/0:20,0:20:60.19:0,60,848	0/0:24,0:24:66.22:0,66,948	0/0:30,0:30:90.29:0,90,1277	1/1:1,25:26:78.19:946,78,0	0/0:39,0:39:99:0,117,1654	0/0:28,0:28:81.27:0,81,1166	0/0:19,0:19:54.18:0,54,776	0/0:31,0:31:93.29:0,93,1315	0/0:30,0:30:87.20:0,87,1188	0/0:27,0:27:78.09:0,78,1093	0/0:10,0:10:27.08:0,27,370	0/0:65,0:65:99:0,193,2723	0/0:31,0:31:93.26:0,93,1298	1/1:2,15:17:51.04:592,51,0	1/1:4,27:31:72.68:871,73,0	0/0:24,0:24:72.24:0,72,1036	0/0:33,0:33:99:0,99,1407	0/0:23,0:23:69.20:0,69,956	0/0:20,0:20:60.12:0,60,768
chr10	70716998	.	CAGA	C	3015.77	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.241;DP=790;FS=3.502;HRun=0;HaplotypeScore=125.8749;InbreedingCoeff=0.9993;MQ=84.27;MQ0=0;MQRankSum=-11.469;QD=37.70;ReadPosRankSum=-0.889;VQSLOD=4.3901;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,108,2384	0/0:9,0:9:27.09:0,27,586	0/0:21,0:21:31.73:0,32,845	0/0:31,0:31:81.13:0,81,1688	0/0:33,0:33:90.31:0,90,1970	0/0:25,0:25:72.25:0,72,1559	0/0:25,0:25:69.18:0,69,1419	0/0:38,0:38:99:0,102,2136	0/0:26,0:26:78.25:0,78,1670	0/0:21,0:21:54.18:0,54,1141	0/0:19,0:19:54.19:0,54,1192	0/0:33,0:33:90.30:0,90,1925	1/1:1,30:31:90.29:1420,90,0	0/0:38,0:38:99:0,111,2430	0/0:30,0:30:84.29:0,84,1837	0/0:17,0:17:48.16:0,48,1042	0/0:36,0:36:93.32:0,93,1996	0/0:34,0:34:93.32:0,93,1997	0/0:23,0:23:60.20:0,60,1285	0/0:10,0:10:30.10:0,30,662	0/0:65,0:65:99:0,190,4056	0/0:33,0:33:96.28:0,96,1976	1/1:1,18:19:45.15:717,45,0	1/1:4,26:30:66.67:1022,67,0	0/0:26,0:26:75.26:0,75,1638	0/0:33,0:33:96.33:0,96,2106	0/0:24,0:24:69.24:0,69,1504	0/0:20,0:20:60.21:0,60,1324
chr10	70718625	.	C	CA	481.16	PASS	AB=0.913;AC=17;AF=0.304;AN=56;BaseQRankSum=2.959;DP=577;FS=4.679;HRun=15;HaplotypeScore=87.3920;InbreedingCoeff=0.4360;MQ=55.72;MQ0=15;MQRankSum=-2.974;QD=1.93;ReadPosRankSum=-2.224;VQSLOD=-0.4529;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,1:35:28.45:140,28,0	0/0:13,0:13:24.96:0,25,147	0/1:17,0:11:11:11,0,23	0/1:11,0:5:11.33:11,0,12	0/0:17,0:18:19.20:0,19,105	0/0:19,1:21:14.02:0,14,184	0/0:18,0:18:20.21:0,20,122	0/1:37,1:39:5.29:5,0,203	0/0:15,1:17:23.20:0,23,142	0/1:12,1:13:4.78:5,0,87	0/0:16,0:17:25.39:0,25,149	0/0:24,0:24:13.62:0,14,155	1/1:12,0:11:5.65:28,6,0	0/0:21,0:22:15.86:0,16,85	0/0:21,0:23:27.68:0,28,160	0/0:20,0:19:17.03:0,17,107	0/0:30,0:31:49.89:0,50,287	0/1:14,0:17:4.80:43,0,5	0/1:23,2:25:24.35:24,0,100	0/0:21,0:20:21.64:0,22,130	0/0:15,0:16:16.97:0,17,87	0/0:17,1:24:4.25:0,4,117	1/1:14,0:13:6.47:29,6,0	1/1:21,0:19:10.06:48,10,0	0/0:16,0:18:21.40:0,21,119	0/1:17,10:27:1.90:185,0,2	0/0:21,0:20:16.48:0,16,96	1/1:5,7:10:14.98:126,15,0
chr10	70719101	.	TGTGGCACCA	T	4304.03	PASS	AB=0.550;AC=7;AF=0.125;AN=56;BaseQRankSum=11.388;DP=710;FS=5.025;HRun=0;HaplotypeScore=194.4907;InbreedingCoeff=0.8199;MQ=78.75;MQ0=0;MQRankSum=-10.339;QD=60.62;ReadPosRankSum=-1.553;VQSLOD=4.3633;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,31:37:75.08:1884,75,0	0/0:9,0:9:27.09:0,27,1130	0/0:20,0:20:57.06:0,57,2286	0/0:18,0:18:51.17:0,51,1890	0/0:21,0:21:57.20:0,57,2588	0/0:19,0:19:57.20:0,57,2797	0/0:26,0:27:78.27:0,78,3691	0/0:30,0:30:84.29:0,84,3929	0/0:27,0:27:81.28:0,81,4001	0/0:25,0:25:75.25:0,75,3460	0/0:14,0:14:39.12:0,39,1542	0/0:37,0:37:99:0,111,5037	0/0:26,0:26:78.27:0,78,3574	0/0:34,0:34:99:0,102,4808	0/0:33,0:33:99:0,99,4756	0/0:27,0:27:81.26:0,81,3790	0/0:52,0:52:99:0,154,7388	1/1:0,5:5:15.05:474,15,0	0/0:25,0:25:75.25:0,75,3327	0/0:24,0:24:69.21:0,69,2897	0/0:45,0:45:99:0,135,6364	0/0:29,0:29:81.28:0,81,3843	0/0:19,0:19:48.16:0,48,2214	0/0:24,0:24:72.25:0,72,3397	0/0:25,0:25:63.22:0,63,2668	0/1:4,18:22:88.84:1567,0,89	0/0:29,0:29:87.26:0,87,3710	1/1:2,5:7:12.04:379,12,0
chr10	70719403	.	T	TACACACAC	4207.66	PASS	AB=0.690;AC=13;AF=0.232;AN=56;BaseQRankSum=2.893;DP=509;FS=6.235;HRun=0;HaplotypeScore=131.4237;InbreedingCoeff=0.7929;MQ=61.55;MQ0=0;MQRankSum=-10.188;QD=36.27;ReadPosRankSum=1.297;VQSLOD=2.6940;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,17:33:36.12:1330,36,0	0/0:7,0:7:15.05:0,15,394	0/0:24,0:19:29.83:0,30,541	0/0:18,0:16:18.02:0,18,337	0/0:26,0:26:66.20:0,66,1540	0/0:16,0:15:42.14:0,42,1103	0/0:17,0:17:33.10:0,33,807	0/0:33,0:33:28.84:0,29,1552	0/0:12,0:12:30.07:0,30,621	0/0:14,0:15:36.11:0,36,789	0/0:17,0:17:39.09:0,39,906	0/0:14,0:14:33.11:0,33,801	1/1:4,0:18:24.06:473,24,0	0/0:14,0:14:30.08:0,30,656	0/0:18,0:18:42.14:0,42,1046	0/0:10,0:10:21.07:0,21,470	0/0:38,0:38:93.30:0,93,2328	1/1:13,7:21:18.06:724,18,0	0/0:15,0:15:39.12:0,39,905	0/0:24,0:24:51.15:0,51,1171	0/0:21,0:21:32.89:0,33,709	0/0:11,0:11:15.05:0,15,390	1/1:2,0:6:3.01:65,3,0	1/1:8,0:15:6.02:130,6,0	0/0:24,0:24:54.17:0,54,1339	0/1:11,8:20:99:1358,0,101	0/0:18,0:18:39.12:0,39,901	1/1:1,2:3:3.01:126,3,0
chr10	70719442	.	T	TA	929.01	PASS	AB=0.917;AC=5;AF=0.089;AN=56;BaseQRankSum=-1.952;DP=423;FS=11.178;HRun=9;HaplotypeScore=52.2819;InbreedingCoeff=0.7111;MQ=72.40;MQ0=0;MQRankSum=-0.795;QD=19.77;ReadPosRankSum=-0.440;VQSLOD=3.2214;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:68.73:0,69,572	0/0:3,0:3:5.99:0,6,52	0/0:17,0:10:8.45:0,8,124	0/1:10,0:7:9.05:14,0,9	0/0:23,0:23:65.99:0,66,572	0/0:20,0:20:47.99:0,48,416	0/0:8,0:8:11.99:0,12,104	0/0:35,0:35:77.92:0,78,671	0/0:10,0:10:29.98:0,30,257	0/0:13,0:13:29.36:0,29,241	0/0:12,0:13:29.02:0,29,240	0/0:11,0:11:26.99:0,27,234	0/0:8,0:8:14.99:0,15,130	0/0:11,0:11:26.97:0,27,232	0/0:17,0:17:44.93:0,45,380	0/0:6,0:6:14.96:0,15,124	0/0:35,0:35:92.93:0,93,801	0/0:17,0:17:47.18:0,47,391	0/0:16,0:16:32.79:0,33,286	0/0:16,0:16:38.97:0,39,335	0/0:7,0:7:17.98:0,18,152	0/0:3,0:3:9:0,9,78	0/0:8,0:8:17.20:0,17,137	0/0:7,0:7:17.92:0,18,147	0/0:19,0:19:42.88:0,43,387	1/1:3,21:24:60.13:645,60,0	0/0:20,0:20:53.98:0,54,466	1/1:0,12:12:36.10:398,36,0
chr10	70720422	.	A	AC	1530	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.150;DP=590;FS=5.892;HRun=4;HaplotypeScore=68.7426;InbreedingCoeff=0.9761;MQ=71.59;MQ0=0;MQRankSum=-1.114;QD=34.00;ReadPosRankSum=0.836;VQSLOD=4.3013;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.20:0,84,930	0/0:14,0:14:39.11:0,39,442	0/0:13,0:7:18.02:0,18,182	0/0:14,0:12:30.50:0,30,316	0/0:7,0:7:21.04:0,21,222	0/0:13,0:13:33.09:0,33,374	0/0:41,0:41:99:0,108,1225	0/0:20,0:20:51.13:0,51,563	0/0:25,0:25:66.18:0,66,742	0/0:14,0:14:42.11:0,42,470	0/0:6,0:6:15.04:0,15,170	0/0:37,0:37:96.23:0,96,1065	0/0:24,0:24:60.17:0,60,677	0/0:26,0:26:69.18:0,69,773	0/0:21,0:21:60.15:0,60,671	0/0:20,0:20:51.14:0,51,579	0/0:35,0:35:99:0,102,1146	0/0:25,0:25:69.18:0,69,773	0/0:20,0:20:51.15:0,51,579	0/0:8,0:8:18.05:0,18,204	0/0:46,0:45:99:0,123,1384	0/0:6,0:6:18.04:0,18,194	0/0:9,0:9:24.07:0,24,272	0/0:35,0:35:99:0,99,1123	0/0:14,0:14:33.09:0,33,374	1/1:3,29:32:56.22:1118,56,0	0/0:21,0:21:54.08:0,54,587	1/1:0,13:13:39.13:533,39,0
chr10	70725077	.	AG	A	2171.60	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.094;DP=703;FS=3.657;HRun=5;HaplotypeScore=66.0905;InbreedingCoeff=0.9992;MQ=82.87;MQ0=0;MQRankSum=-1.845;QD=27.84;ReadPosRankSum=3.982;VQSLOD=4.0576;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,1780	0/0:8,0:8:24.08:0,24,328	0/0:18,0:18:50.35:0,50,619	0/0:25,0:25:66.20:0,66,843	0/0:27,0:27:75.21:0,75,976	0/0:34,0:34:93.29:0,93,1248	0/0:29,0:29:75.23:0,75,1008	0/0:24,0:24:66.22:0,66,902	0/0:25,0:25:75.25:0,75,1025	0/0:22,0:22:60.19:0,60,797	0/0:11,0:11:33.11:0,33,448	0/0:31,0:31:84.27:0,84,1133	1/1:0,25:25:66.19:749,66,0	0/0:29,0:29:75.22:0,75,993	0/0:31,0:31:84.27:0,84,1133	0/0:20,0:20:60.20:0,60,821	0/0:30,0:30:90.28:0,90,1209	0/0:16,0:16:45.11:0,45,594	0/0:22,0:22:54.16:0,54,707	0/0:33,0:33:87.28:0,87,1175	0/0:43,0:43:99:0,126,1705	0/0:15,0:15:45.15:0,45,615	1/1:0,20:20:54.15:613,54,0	1/1:1,32:33:84.24:953,84,0	0/0:20,0:20:48.07:0,48,614	0/0:24,0:24:63.18:0,63,828	0/0:27,0:27:75.25:0,75,1024	0/0:15,0:15:45.15:0,45,615
chr10	70726237	.	TA	T	2553.03	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.702;DP=695;FS=5.539;HRun=9;HaplotypeScore=76.0234;InbreedingCoeff=0.9614;MQ=71.45;MQ0=1;MQRankSum=-0.535;QD=19.34;ReadPosRankSum=3.753;VQSLOD=4.1742;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,57:60:99:1180,129,0	0/0:6,0:6:18.05:0,18,208	0/0:23,0:17:23.65:0,24,295	0/0:11,0:8:15.02:0,15,161	0/0:19,0:19:54.16:0,54,623	0/0:17,0:17:48.14:0,48,554	0/0:26,0:26:69.19:0,69,787	0/0:26,0:25:66.20:0,66,762	0/0:19,0:19:48.13:0,48,546	0/0:25,0:26:69.03:0,69,770	0/0:24,0:24:60.17:0,60,683	0/0:37,0:37:93.25:0,93,1054	0/0:8,0:26:51.25:0,51,269	0/0:19,1:20:23.69:0,24,526	0/0:21,0:22:62.99:0,63,687	0/0:21,0:22:59.98:0,60,652	0/0:36,0:36:99:0,102,1177	1/1:2,29:31:81.04:741,81,0	0/0:25,0:25:66.15:0,66,723	0/0:31,0:31:70.08:0,70,790	0/0:30,1:31:50.74:0,51,818	0/0:21,0:21:57.15:0,57,639	0/0:4,0:16:22.72:0,23,131	0/0:3,0:31:65.46:0,65,337	0/0:24,1:25:41.91:0,42,718	1/1:6,28:34:52.42:731,52,0	0/0:22,0:22:63.13:0,63,684	1/1:4,3:7:6:55,6,0
chr10	70726436	.	C	CA	7376.36	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-16.010;DP=677;FS=7.380;HRun=3;HaplotypeScore=63.1748;InbreedingCoeff=0.9894;MQ=87.09;MQ0=0;MQRankSum=-1.873;QD=38.22;ReadPosRankSum=3.554;VQSLOD=5.1133;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,50:52:99:2059,147,0	0/0:4,0:4:9.03:0,9,108	0/0:20,0:20:48.14:0,48,569	0/0:28,0:28:62.74:0,63,692	0/0:16,0:16:45.14:0,45,539	0/0:21,0:21:60.17:0,60,708	0/0:24,0:24:69.21:0,69,828	0/0:49,0:49:99:0,144,1709	0/0:22,0:22:63.18:0,63,744	0/0:30,0:30:87.27:0,87,1044	0/0:23,0:23:63.18:0,63,745	0/0:23,0:23:63.19:0,63,756	1/1:0,25:25:72.24:1008,72,0	0/0:17,0:17:48.13:0,48,564	0/0:31,0:31:87.25:0,87,1032	0/0:16,0:16:48.14:0,48,566	0/0:34,0:34:93.28:0,93,1116	1/1:0,28:28:81.27:1134,81,0	0/0:17,0:17:48.15:0,48,576	0/0:16,0:16:45.12:0,45,529	0/0:26,0:26:75.20:0,75,885	0/0:21,0:21:54.17:0,54,648	1/1:0,19:19:57.19:794,57,0	1/1:2,24:26:72.24:1008,72,0	0/0:24,0:24:66.20:0,66,792	1/1:6,22:28:36.24:920,36,0	0/0:22,0:22:63.19:0,63,756	1/1:3,12:15:33.11:453,33,0
chr10	70728811	.	TGAGAGA	T	317.19	PASS	AB=0.773;AC=6;AF=0.115;AN=52;BaseQRankSum=4.328;DP=688;FS=11.625;HRun=0;HaplotypeScore=137.3432;InbreedingCoeff=0.5939;MQ=59.83;MQ0=35;MQRankSum=-0.922;QD=3.30;ReadPosRankSum=-0.889;VQSLOD=2.0283;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,6:36:0.01:0,0,0	0/0:8,0:8:0.89:0,1,2	./.	./.	0/0:13,0:16:9.03:0,9,174	0/0:22,0:22:30.10:0,30,805	0/0:28,0:29:14.19:0,14,473	0/0:27,0:26:3.39:0,3,9	0/0:29,0:29:33.10:0,33,850	0/0:17,0:17:33.11:0,33,939	0/0:12,0:12:14.77:0,15,205	0/0:25,0:27:33.07:0,33,742	0/0:18,0:18:6.02:0,6,155	0/0:21,0:23:18.06:0,18,436	0/0:28,0:28:36.12:0,36,948	0/0:19,0:19:21.07:0,21,628	0/0:16,0:18:9.03:0,9,254	0/0:15,0:22:3.50:0,3,82	0/0:23,0:20:20.20:0,20,373	0/0:12,0:13:15.02:0,15,274	0/0:47,0:47:49.49:0,49,1113	0/1:13,6:21:0:0,0,0	0/0:11,0:10:12.04:0,12,321	0/0:24,0:23:3.48:0,3,79	0/0:14,0:16:18.06:0,18,461	1/1:23,4:28:14.54:244,15,0	0/0:20,0:22:18.53:0,19,487	1/1:7,3:10:5.13:176,5,0
chr10	70728856	.	G	GAGAGAT	614.57	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.806;DP=605;FS=8.436;HRun=0;HaplotypeScore=132.1136;InbreedingCoeff=0.8325;MQ=66.35;MQ0=5;MQRankSum=-0.734;QD=7.23;ReadPosRankSum=-2.285;VQSLOD=1.6840;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:56.65:0,57,435	0/0:9,0:9:17.96:0,18,145	0/0:31,0:18:24.19:0,24,351	0/0:40,0:23:34.08:0,34,319	0/0:21,0:21:45.13:0,45,465	0/0:14,0:14:29.99:0,30,373	0/0:26,0:26:71.93:0,72,816	0/0:40,0:40:97.29:0,97,925	0/0:21,0:21:33.84:0,34,574	0/0:29,0:29:68.93:0,69,834	0/0:9,0:9:17.76:0,18,180	0/0:18,0:18:47.79:0,48,659	1/1:2,29:32:6.02:199,6,0	0/0:16,0:16:45:0,45,571	0/0:25,0:25:68.84:0,69,922	0/0:18,0:18:50.76:0,51,713	0/0:14,0:14:3.94:0,4,230	0/0:22,0:22:56.82:0,57,578	0/0:14,0:13:36.05:0,36,430	0/0:21,0:21:56.95:0,57,551	0/0:30,0:30:74.96:0,75,968	0/0:19,0:19:29.84:0,30,232	1/1:25,0:25:56.91:487,57,0	1/1:3,19:27:2.92:51,3,0	0/0:17,0:17:32.96:0,33,390	0/0:15,0:15:39.05:0,39,431	0/0:12,0:12:32.78:0,33,393	0/0:8,0:8:23.97:0,24,278
chr10	70729442	.	T	TC	2373.01	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-8.668;DP=534;FS=6.364;HRun=0;HaplotypeScore=57.4776;InbreedingCoeff=0.9953;MQ=73.89;MQ0=4;MQRankSum=-1.498;QD=31.64;ReadPosRankSum=2.157;VQSLOD=3.2983;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:26:57.17:779,57,0	0/0:12,0:12:36.11:0,36,476	0/0:29,0:20:37.77:0,38,375	0/0:22,0:17:31.94:0,32,295	0/0:23,0:23:63.17:0,63,796	0/0:22,0:22:63.16:0,63,782	0/0:14,0:14:41.86:0,42,522	0/0:25,0:25:69.12:0,69,814	0/0:15,0:14:42.13:0,42,565	0/0:19,0:19:54.14:0,54,671	0/0:15,0:15:42.13:0,42,558	0/0:17,0:17:51.09:0,51,668	0/0:15,0:15:45.13:0,45,592	0/0:22,0:22:57.10:0,57,677	0/0:24,0:24:68.67:0,69,854	0/0:23,0:23:69.18:0,69,922	0/0:20,0:20:60.14:0,60,786	1/1:2,18:18:54.18:746,54,0	0/0:12,0:12:36.11:0,36,476	0/0:20,0:20:57.16:0,57,736	0/0:20,0:20:57.16:0,57,749	0/0:17,0:17:47.89:0,48,629	0/0:15,0:15:45.13:0,45,582	0/0:13,0:13:39.06:0,39,493	0/0:18,0:18:51.14:0,51,646	1/1:1,21:22:63.17:821,63,0	0/0:26,0:26:49.23:0,49,896	1/1:0,7:7:15.01:187,15,0
chr10	70730602	.	AAGAGAGAGAGAG	A	125.91	PASS	AB=0.886;AC=5;AF=0.093;AN=54;BaseQRankSum=3.743;DP=701;FS=19.358;HRun=0;HaplotypeScore=198.3330;InbreedingCoeff=0.3937;MQ=67.82;MQ0=25;MQRankSum=-2.776;QD=1.88;ReadPosRankSum=-1.497;VQSLOD=1.3270;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:39.13:0,39,1420	./.	0/0:80,0:32:3.01:0,3,39	0/0:82,0:20:4.19:0,4,14	0/0:20,0:20:9.03:0,9,397	0/0:20,0:20:33.11:0,33,1345	0/0:16,0:17:24.08:0,24,1030	0/0:32,0:31:17.56:0,18,382	0/0:19,0:19:18.06:0,18,644	0/0:19,0:18:24.08:0,24,992	0/0:10,0:10:6.02:0,6,274	0/0:24,0:24:24.55:0,25,1006	1/1:21,0:21:1.24:3,1,0	0/0:24,0:25:21.05:0,21,893	0/0:27,0:27:17.88:0,18,658	0/0:32,0:32:39.11:0,39,1515	0/0:19,0:18:33.09:0,33,1272	0/0:17,0:19:25.90:0,26,951	0/0:14,0:15:13.56:0,14,353	0/0:17,0:16:9.03:0,9,349	0/0:19,0:18:21.07:0,21,842	0/0:20,0:20:18.95:0,19,596	1/1:10,4:14:2.71:20,3,0	0/1:27,3:31:11.82:194,0,12	0/0:22,0:22:13.66:0,14,480	0/0:20,0:21:34.02:0,34,1238	0/0:21,0:21:24.08:0,24,878	0/0:11,0:10:15.05:0,15,542
chr10	70737284	.	GAA	G	1043.37	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=9.841;DP=566;FS=1.751;HRun=3;HaplotypeScore=89.8959;InbreedingCoeff=0.6503;MQ=56.78;MQ0=10;MQRankSum=-7.012;QD=9.32;ReadPosRankSum=-0.725;VQSLOD=0.0431;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,2:8:15:150,15,0	0/0:16,0:15:42.68:0,43,598	0/0:9,0:9:14.19:0,14,198	0/0:6,0:6:15.04:0,15,182	0/0:26,0:26:65.06:0,65,1148	0/0:33,0:33:99:0,99,1732	0/0:21,0:21:57.15:0,57,950	0/0:27,0:22:63.15:0,63,915	0/0:25,0:25:71.58:0,72,1197	0/0:18,0:18:54.16:0,54,889	0/0:20,0:20:60.15:0,60,957	0/0:20,0:19:36.75:0,37,854	0/1:20,0:18:34.04:34,0,129	0/0:19,0:19:57.16:0,57,909	0/0:23,0:23:69.17:0,69,1202	0/0:21,0:21:60.19:0,60,1072	0/0:41,0:41:99:0,113,1906	1/1:8,5:13:22.92:280,23,0	0/0:24,0:22:66.13:0,66,962	0/0:26,0:26:78.24:0,78,1323	0/0:10,0:10:27.09:0,27,491	0/0:26,0:26:78.24:0,78,1372	0/1:29,0:27:36.36:38,0,36	0/1:12,0:11:16.78:17,0,60	0/0:22,0:22:66.17:0,66,1162	1/1:15,6:18:49.40:435,49,0	0/0:20,0:20:57.17:0,57,962	1/1:3,6:8:20.66:260,21,0
chr10	70737286	.	AAGAGAGAGAGAGAG	A	957.40	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=8.689;DP=561;FS=0.000;HRun=0;HaplotypeScore=215.8047;InbreedingCoeff=0.5365;MQ=56.61;MQ0=10;MQRankSum=-8.637;QD=9.30;ReadPosRankSum=0.878;VQSLOD=2.2720;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:3.97:0,4,305	0/0:16,0:15:45.07:0,45,1744	0/0:9,0:8:15.02:0,15,282	0/0:5,0:5:9.02:0,9,195	0/0:26,0:26:75.24:0,75,3832	0/0:33,0:33:96.33:0,96,5020	0/0:20,0:20:54.16:0,54,2542	0/0:29,0:24:66.23:0,66,2319	0/0:23,0:23:69.22:0,69,3420	0/0:17,0:17:51.17:0,51,2558	0/0:21,0:21:57.13:0,57,2576	0/0:20,0:20:60.19:0,60,2995	1/1:19,0:17:25.16:324,25,0	0/0:19,0:19:54.14:0,54,2501	0/0:23,0:23:63.22:0,63,3539	0/0:20,0:20:57.20:0,57,3301	0/0:41,0:41:99:0,117,5710	0/1:13,0:13:25.56:26,0,739	0/0:24,0:22:63.15:0,63,2573	0/0:27,0:27:81.26:0,81,4254	0/0:9,0:9:27.09:0,27,1489	0/0:27,0:27:81.25:0,81,4097	1/1:11,18:27:18.05:388,18,0	1/1:12,0:11:3.79:270,4,0	0/0:22,0:22:46.24:0,46,3351	0/1:19,0:18:92.40:92,0,608	0/0:19,0:19:57.18:0,57,2859	0/1:9,0:8:3.73:4,0,721
chr10	70737288	.	G	GAA	1202.89	PASS	AB=0.976;AC=11;AF=0.196;AN=56;BaseQRankSum=10.962;DP=547;FS=1.864;HRun=3;HaplotypeScore=90.6625;InbreedingCoeff=0.6256;MQ=55.49;MQ0=10;MQRankSum=-7.423;QD=11.79;ReadPosRankSum=2.232;VQSLOD=0.8002;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:6:15.79:16,0,42	0/0:16,0:15:43.67:0,44,476	0/0:8,0:7:15.03:0,15,159	0/0:4,0:4:9.01:0,9,99	0/0:26,0:26:38.51:0,39,964	0/0:33,0:33:99:0,99,1433	0/0:20,0:20:54.14:0,54,759	0/0:28,0:23:65.90:0,66,816	0/0:23,0:23:50.16:0,50,932	0/0:17,0:17:51.15:0,51,707	0/0:20,0:20:57.14:0,57,799	0/0:21,0:20:59.94:0,60,795	1/1:7,9:14:27.09:421,27,0	0/0:18,0:18:54.13:0,54,751	0/0:22,0:22:63.19:0,63,918	0/0:20,0:20:57.18:0,57,845	0/0:42,0:42:99:0,120,1586	0/1:12,0:13:51.08:68,0,51	0/0:23,0:21:63.10:0,63,811	0/0:27,0:27:81.15:0,81,1099	0/0:9,0:9:27.09:0,27,402	0/0:27,0:27:81.22:0,81,1149	1/1:23,4:25:18.06:291,18,0	1/1:4,8:11:12.17:184,12,0	0/0:22,0:22:46.24:0,46,918	0/1:16,0:16:19.52:245,0,20	0/0:19,0:19:57.15:0,57,798	1/1:9,0:8:8.89:144,9,0
chr10	70737340	.	G	GAGAT	6607.47	PASS	AB=0.859;AC=28;AF=0.560;AN=50;BaseQRankSum=-6.828;DP=595;FS=6.687;HRun=0;HaplotypeScore=161.9666;InbreedingCoeff=0.5838;MQ=54.04;MQ0=7;MQRankSum=5.754;QD=17.96;ReadPosRankSum=-1.171;VQSLOD=3.7466;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:12.04:0,12,148	1/1:10,0:9:9.01:163,9,0	./.	./.	1/1:19,12:32:33.11:632,33,0	0/0:26,0:28:24.05:0,24,302	0/0:15,0:15:16.87:0,17,230	./.	1/1:18,0:24:15.05:249,15,0	0/1:12,9:21:57.64:553,0,58	1/1:11,12:25:27.09:594,27,0	1/1:22,0:21:12.04:201,12,0	0/0:12,0:15:9.01:0,9,82	0/1:16,0:16:48.34:48,0,230	1/1:17,0:20:9.03:161,9,0	1/1:26,0:26:27.09:621,27,0	0/0:39,0:39:33.11:0,33,499	0/0:4,0:4:6.02:0,6,85	1/1:21,0:25:15.05:264,15,0	1/1:13,17:31:42.14:884,42,0	1/1:11,0:11:6.86:65,7,0	0/1:16,9:25:6.87:276,0,7	0/1:21,0:25:13.65:14,0,36	0/0:10,0:11:0.89:0,1,2	1/1:30,0:30:17.80:1189,18,0	0/0:20,0:20:32.03:0,32,243	1/1:23,0:23:33.10:695,33,0	0/0:17,0:17:15.70:0,16,119
chr10	70737418	.	C	CTCAAAAGTG	4143.58	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-2.176;DP=555;FS=32.158;HRun=0;HaplotypeScore=171.6734;InbreedingCoeff=0.8895;MQ=67.59;MQ0=0;MQRankSum=-8.411;QD=82.87;ReadPosRankSum=-0.698;VQSLOD=2.0798;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,8:17:33.11:1467,33,0	0/0:9,0:9:24.08:0,24,700	0/0:12,0:12:30.10:0,30,799	0/0:9,0:8:2.24:0,2,336	0/0:32,0:32:81.28:0,81,2282	0/0:18,0:18:45.15:0,45,1299	0/0:18,0:18:48.16:0,48,1374	0/0:29,0:28:60.20:0,60,1625	0/0:29,0:29:69.20:0,69,1917	0/0:22,0:22:51.16:0,51,1395	0/0:25,0:25:57.20:0,57,1627	0/0:20,0:20:60.18:0,60,1619	0/0:19,0:19:51.18:0,51,1461	0/0:17,0:17:45.15:0,45,1284	0/0:16,0:16:45.15:0,45,1240	0/0:19,0:19:45.15:0,45,1313	0/0:29,0:29:75.24:0,75,2111	1/1:7,1:8:6.65:558,7,0	0/0:15,0:15:42.10:0,42,1158	0/0:30,0:30:72.23:0,72,1861	0/0:11,0:11:33.11:0,33,962	0/0:28,0:28:72.24:0,72,2003	0/0:24,0:24:57.20:0,57,1663	0/0:22,0:22:54.18:0,54,1524	0/0:31,0:31:78.27:0,78,2135	1/1:11,10:21:39.13:1837,39,0	0/0:21,0:21:57.20:0,57,1623	1/1:1,2:3:6.02:282,6,0
chr10	70738212	.	C	CGT	1107.53	PASS	AB=0.869;AC=19;AF=0.339;AN=56;BaseQRankSum=1.481;DP=631;FS=10.777;HRun=0;HaplotypeScore=104.9319;InbreedingCoeff=0.7050;MQ=72.37;MQ0=13;MQRankSum=-1.223;QD=4.43;ReadPosRankSum=-1.749;VQSLOD=1.8681;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:35:6:52,6,0	0/0:7,0:7:15.04:0,15,164	0/1:38,0:22:0:0,0,0	0/0:46,0:32:9.01:0,9,90	0/0:20,0:23:20.72:0,21,191	0/0:18,0:20:29.74:0,30,291	0/0:16,0:19:41.60:0,42,401	0/0:22,0:21:19.26:0,19,210	0/0:16,0:16:24.05:0,24,258	0/1:22,1:23:12.47:12,0,296	0/0:15,0:16:20.89:0,21,209	0/0:25,0:28:26.34:0,26,240	1/1:19,0:19:11.36:96,11,0	0/0:15,0:16:23.90:0,24,249	1/1:10,11:21:27.09:410,27,0	0/1:12,14:26:6.42:338,0,6	0/0:30,0:30:44.96:0,45,483	1/1:9,0:14:11.88:88,12,0	0/0:13,0:13:5.31:0,5,66	0/0:19,0:19:12.03:0,12,134	0/0:41,0:43:30.87:0,31,536	0/0:18,0:21:14.87:0,15,148	1/1:16,0:22:6.47:53,6,0	1/1:18,0:20:5.74:38,6,0	0/0:22,0:23:7.71:0,8,267	1/1:20,0:20:18.79:143,19,0	0/0:17,0:18:20.79:0,21,213	1/1:10,0:10:6.01:64,6,0
chr10	70738699	.	A	ATGT	10953.40	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-15.174;DP=874;FS=2.176;HRun=0;HaplotypeScore=114.0306;InbreedingCoeff=0.9998;MQ=81.72;MQ0=0;MQRankSum=-4.602;QD=49.79;ReadPosRankSum=4.695;VQSLOD=6.7430;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,46:49:99:2856,132,0	0/0:14,0:14:36.11:0,36,560	0/0:29,0:29:78.06:0,78,1112	0/0:19,0:19:51.10:0,51,775	0/0:20,0:20:53.93:0,54,786	0/0:19,0:19:54.18:0,54,855	0/0:42,0:42:99:0,117,1818	0/0:20,0:20:60.20:0,60,959	0/0:27,0:27:72.23:0,72,1128	0/0:36,0:36:99:0,105,1642	0/0:21,0:21:60.20:0,60,977	0/0:37,0:37:99:0,105,1633	1/1:2,24:26:45.15:990,45,0	0/0:31,0:31:84.27:0,84,1342	0/0:47,0:47:99:0,132,2098	0/0:41,0:41:99:0,117,1847	0/0:48,0:48:99:0,123,1929	1/1:3,25:28:60.21:1324,60,0	0/0:34,0:34:99:0,99,1493	0/0:25,0:25:75.24:0,75,1194	0/0:57,0:57:99:0,172,2659	0/0:32,0:32:93.30:0,93,1466	1/1:1,17:18:45.05:934,45,0	1/1:7,34:41:78.27:1686,78,0	0/0:24,0:24:72.25:0,72,1162	1/1:6,39:45:34.44:2501,34,0	0/0:31,0:31:93.24:0,93,1351	1/1:0,10:13:30.10:662,30,0
chr10	70738894	.	A	AGGGAGC	1933.79	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.370;DP=708;FS=0.000;HRun=0;HaplotypeScore=153.3832;InbreedingCoeff=0.9832;MQ=70.54;MQ0=0;MQRankSum=-6.297;QD=29.75;ReadPosRankSum=-1.471;VQSLOD=3.1390;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:93.06:0,93,1644	0/0:13,0:13:30.09:0,30,580	0/0:21,0:17:24.38:0,24,359	0/0:37,0:35:23.28:0,23,481	0/0:16,0:16:21.07:0,21,446	0/0:17,0:17:42.05:0,42,696	0/0:33,0:33:63.19:0,63,1242	0/0:27,0:27:48.03:0,48,591	0/0:25,0:25:60.18:0,60,1180	0/0:27,0:27:42.12:0,42,820	0/0:10,0:10:15.02:0,15,233	0/0:26,0:26:66.20:0,66,1328	1/1:7,13:21:27.09:847,27,0	0/0:31,0:31:69.17:0,69,1277	0/0:44,0:44:99:0,105,1906	0/0:25,0:25:60.12:0,60,1116	0/0:35,0:35:72.17:0,72,1395	0/0:23,0:23:54.17:0,54,1091	0/0:25,0:25:51.03:0,51,740	0/0:17,0:17:24.07:0,24,443	0/0:18,0:18:33.07:0,33,585	0/0:18,0:18:30.08:0,30,555	1/1:7,6:14:24.08:731,24,0	1/1:12,16:30:15:496,15,0	0/0:26,0:26:54.12:0,54,993	0/0:37,0:37:72.11:0,72,1256	0/0:31,0:31:63.06:0,63,985	0/0:15,0:15:33.11:0,33,703
chr10	70740906	.	AT	A	985.89	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=7.583;DP=510;FS=0.000;HRun=9;HaplotypeScore=60.1921;InbreedingCoeff=0.8109;MQ=78.52;MQ0=4;MQRankSum=-0.501;QD=12.17;ReadPosRankSum=1.140;VQSLOD=2.9034;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:48.03:439,48,0	0/0:7,0:7:21.04:0,21,229	0/1:28,0:20:8.60:9,0,164	0/0:16,0:11:5.14:0,5,73	0/0:27,0:27:65.85:0,66,727	0/0:28,0:28:72.11:0,72,786	0/0:9,0:9:24.05:0,24,257	0/0:35,0:35:84.23:0,84,952	0/0:19,0:19:48.12:0,48,534	0/0:28,0:28:72.19:0,72,802	0/0:20,0:20:54.06:0,54,568	0/0:16,0:16:42.12:0,42,476	0/0:14,0:14:41.35:0,41,275	0/0:20,0:20:54.12:0,54,592	0/0:13,0:13:27.06:0,27,293	0/0:15,0:15:42.11:0,42,467	0/0:25,0:25:69.15:0,69,761	1/1:2,10:12:27.01:247,27,0	0/0:22,0:22:57.14:0,57,645	0/0:15,0:15:39.09:0,39,430	0/0:11,0:11:33.10:0,33,381	0/0:12,1:13:5.60:0,6,289	0/0:19,0:19:46:0,46,268	0/0:16,0:16:41.10:0,41,252	0/0:17,0:17:41.51:0,42,506	1/1:2,15:17:44.27:368,44,0	0/0:24,0:24:66.16:0,66,732	1/1:1,3:4:9:82,9,0
chr10	70740915	.	TAA	T	1424.29	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.984;DP=497;FS=0.605;HRun=7;HaplotypeScore=66.9883;InbreedingCoeff=0.9812;MQ=73.96;MQ0=5;MQRankSum=0.677;QD=30.30;ReadPosRankSum=3.997;VQSLOD=3.3700;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:53.70:0,54,607	0/0:6,0:6:18.06:0,18,307	0/0:26,0:17:26.02:0,26,290	0/0:15,0:8:17.17:0,17,165	0/0:26,0:26:72.24:0,72,1187	0/0:29,0:29:84.25:0,84,1389	0/0:10,0:10:24.08:0,24,406	0/0:34,0:34:99:0,99,1653	0/0:17,0:17:45.15:0,45,758	0/0:26,0:26:69.24:0,69,1174	0/0:20,0:20:48.15:0,48,788	0/0:16,0:16:45.15:0,45,758	1/1:1,13:14:36.11:459,36,0	0/0:18,0:18:48.16:0,48,815	0/0:14,0:14:36.12:0,36,600	0/0:16,0:16:45.15:0,45,754	0/0:24,0:24:63.22:0,63,1073	0/0:12,0:12:33.09:0,33,403	0/0:22,0:22:63.21:0,63,1038	0/0:14,0:14:39.12:0,39,636	0/0:12,0:12:36.12:0,36,610	0/0:13,0:13:30.10:0,30,491	1/1:0,18:18:48.15:611,48,0	1/1:0,15:15:39.12:497,39,0	0/0:16,0:16:45.15:0,45,753	0/0:16,0:16:45.04:0,45,503	0/0:23,0:23:63.20:0,63,1045	0/0:4,0:4:12.04:0,12,141
chr10	70741268	.	TGGGGTGGGGGTA	T	1807.29	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=5.808;DP=165;FS=12.561;HRun=0;HaplotypeScore=60.6906;InbreedingCoeff=0.5970;MQ=101.44;MQ0=0;MQRankSum=-6.074;QD=42.03;ReadPosRankSum=2.311;VQSLOD=1.9502;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:15.04:0,15,636	0/0:1,0:1:3.01:0,3,52	0/0:14,0:12:24.03:0,24,628	0/0:20,0:15:11.63:0,12,620	0/0:9,0:9:24.08:0,24,1154	0/0:4,0:4:12.04:0,12,703	0/0:3,0:3:9.03:0,9,282	0/0:6,0:6:18.06:0,18,917	0/0:4,0:4:12.04:0,12,487	0/0:1,0:1:3.01:0,3,104	0/0:5,0:5:12.04:0,12,660	0/0:3,0:3:9.03:0,9,542	1/1:1,12:13:27.09:997,27,0	0/0:3,0:3:9.03:0,9,525	0/0:5,0:5:15.05:0,15,825	0/0:3,0:3:9.03:0,9,533	0/0:4,0:4:9.03:0,9,287	0/0:2,0:2:6.02:0,6,142	0/0:4,0:4:9.03:0,9,444	0/0:3,0:3:9.03:0,9,465	0/0:7,0:7:18.06:0,18,917	0/0:5,0:5:15.05:0,15,903	1/1:5,17:22:35.97:917,36,0	1/1:2,6:8:2.98:22,3,0	0/0:3,0:3:6.02:0,6,255	0/0:4,0:4:9.03:0,9,454	0/0:3,0:3:9.03:0,9,414	./.
chr10	70741836	.	TGA	T	593.66	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=5.401;DP=686;FS=26.542;HRun=0;HaplotypeScore=97.3494;InbreedingCoeff=0.1685;MQ=59.55;MQ0=13;MQRankSum=1.806;QD=3.66;ReadPosRankSum=-2.389;VQSLOD=0.5595;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:38:7.33:346,7,0	0/0:5,0:5:5.48:0,5,146	0/1:31,0:12:11.51:12,0,201	0/0:36,0:18:34.72:0,35,294	0/0:30,0:30:33.25:0,33,745	0/0:30,0:30:43.48:0,43,674	0/0:29,0:29:49.17:0,49,676	0/0:30,0:29:54.93:0,55,705	0/0:14,0:13:24.50:0,24,331	0/0:33,0:33:27.85:0,28,680	0/0:16,0:16:13.07:0,13,392	0/0:20,0:18:36.51:0,37,389	0/0:15,0:15:20.99:0,21,193	0/0:18,0:18:44.50:0,44,458	0/0:23,0:22:28.04:0,28,481	0/0:15,5:20:2.72:0,3,443	0/0:31,0:31:47.48:0,47,639	0/1:19,0:19:12.31:278,0,12	0/0:27,0:26:26.45:0,26,463	0/0:28,0:28:65.17:0,65,518	0/1:46,0:46:43.25:43,0,551	0/0:14,0:14:23.90:0,24,307	0/0:22,0:22:35.89:0,36,311	0/0:24,0:24:42.01:0,42,425	0/0:25,0:25:43.80:0,44,594	0/1:27,0:26:36.96:37,0,412	0/0:23,0:23:13.48:0,13,304	0/0:11,0:11:6.16:0,6,171
chr10	70741838	.	AGT	A	600.18	PASS	AB=0.914;AC=23;AF=0.442;AN=52;BaseQRankSum=4.892;DP=693;FS=10.611;HRun=0;HaplotypeScore=100.0261;InbreedingCoeff=-0.1354;MQ=58.34;MQ0=15;MQRankSum=0.996;QD=1.36;ReadPosRankSum=0.895;VQSLOD=1.1728;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:14.41:0,14,177	0/1:4,1:5:20.82:21,0,109	./.	./.	0/1:27,2:29:33.67:34,0,313	0/1:26,4:30:3.49:3,0,344	0/1:23,4:27:52:52,0,295	1/1:30,1:29:3.44:34,3,0	0/1:12,0:11:29.66:30,0,120	0/1:31,0:32:21.80:22,0,220	0/0:17,0:17:21.86:0,22,267	0/1:18,2:18:20.80:21,0,103	0/0:10,0:18:3.48:0,3,34	0/0:17,0:17:21.06:0,21,275	0/1:19,3:21:79.56:80,0,219	0/1:19,0:20:19.04:19,0,181	0/1:26,0:30:28.58:29,0,220	0/0:19,0:19:15.75:0,16,188	1/1:24,0:27:11.48:69,11,0	0/1:27,0:28:8.32:8,0,19	1/1:44,4:49:7:192,7,0	0/1:13,2:15:17.78:18,0,150	0/0:19,0:19:3:0,3,25	0/0:14,0:29:20.97:0,21,176	0/1:23,3:25:41.45:41,0,226	0/0:28,0:27:32.87:0,33,316	1/1:18,0:26:5.31:84,5,0	1/1:11,0:11:0.47:1,0,0
chr10	70742003	.	T	TCCAG	3506.08	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.455;DP=650;FS=1.185;HRun=0;HaplotypeScore=107.5248;InbreedingCoeff=0.9950;MQ=83.20;MQ0=0;MQRankSum=-3.668;QD=53.12;ReadPosRankSum=2.998;VQSLOD=5.0407;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,2094	0/0:7,0:7:21.07:0,21,407	0/0:29,0:29:84.25:0,84,1524	0/0:21,0:21:33.50:0,34,882	0/0:30,0:30:87.29:0,87,1638	0/0:27,0:27:81.28:0,81,1558	0/0:27,0:27:78.27:0,78,1512	0/0:35,0:35:99:0,99,1802	0/0:22,0:22:66.23:0,66,1279	0/0:34,0:34:99:0,102,1941	0/0:18,0:18:48.16:0,48,906	0/0:26,0:26:69.24:0,69,1336	1/1:2,15:17:36.12:959,36,0	0/0:24,0:24:66.23:0,66,1279	0/0:26,0:26:75.24:0,75,1403	0/0:23,0:23:66.23:0,66,1279	0/0:22,0:22:17.39:0,17,1137	0/0:15,0:15:42.14:0,42,814	0/0:13,0:13:39.13:0,39,725	0/0:18,0:18:51.17:0,51,971	0/0:22,0:22:51.76:0,52,1097	0/0:21,0:21:57.20:0,57,1105	1/1:2,17:20:36.07:986,36,0	1/1:4,25:29:56.87:1561,57,0	0/0:22,0:22:66.23:0,66,1276	0/0:20,0:20:60.20:0,60,1129	0/0:26,0:26:75.26:0,75,1440	0/0:16,0:16:45.12:0,45,804
chr10	70744131	.	TA	T	2145.16	PASS	AC=8;AF=0.160;AN=50;BaseQRankSum=9.311;DP=616;FS=3.727;HRun=10;HaplotypeScore=72.3281;InbreedingCoeff=0.9797;MQ=78.52;MQ0=1;MQRankSum=1.035;QD=19.68;ReadPosRankSum=3.139;VQSLOD=4.7158;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,46:52:99:1119,129,0	0/0:13,0:13:30.08:0,30,332	0/0:23,0:19:9.89:0,10,168	0/0:19,0:19:15.71:0,16,225	0/0:18,0:18:42.01:0,42,437	0/0:20,0:20:39.91:0,40,506	0/0:22,0:22:57.09:0,57,615	0/0:28,0:28:69.16:0,69,736	0/0:19,0:19:51.10:0,51,551	0/0:34,0:35:86.26:0,86,899	0/0:13,0:13:39.10:0,39,424	0/0:16,0:16:48.08:0,48,497	./.	0/0:27,0:27:75.20:0,75,828	0/0:35,0:36:87.05:0,87,929	0/0:31,0:31:81.20:0,81,880	0/0:29,0:29:72.16:0,72,778	1/1:1,20:21:44.43:390,44,0	0/0:12,0:12:27.06:0,27,291	0/0:28,0:28:76.75:0,77,826	0/0:31,0:31:81.16:0,81,865	0/0:26,0:26:69.16:0,69,740	./.	./.	0/0:32,0:32:55.23:0,55,822	1/1:4,26:30:74.83:637,75,0	0/0:28,0:29:78:0,78,811	1/1:1,5:6:17.99:155,18,0
chr10	70745665	.	AGGAAGCT	A	1514.07	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.634;DP=510;FS=18.531;HRun=0;HaplotypeScore=113.1849;InbreedingCoeff=0.9726;MQ=89.17;MQ0=0;MQRankSum=-7.943;QD=56.08;ReadPosRankSum=-0.932;VQSLOD=1.8443;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.14:0,48,1732	0/0:10,0:10:30.08:0,30,1026	0/0:22,0:23:57.18:0,57,2119	0/0:16,0:16:42.14:0,42,1570	0/0:24,0:24:66.20:0,66,2512	0/0:33,0:33:93.32:0,93,3669	0/0:17,0:17:39.12:0,39,1453	0/0:52,0:52:99:0,126,4877	0/0:16,0:16:42.14:0,42,1651	0/0:18,0:18:51.18:0,51,1996	0/0:20,0:20:57.20:0,57,2247	0/0:12,0:12:36.12:0,36,1428	1/1:0,5:5:15.05:384,15,0	0/0:12,0:12:36.12:0,36,1428	0/0:16,0:16:48.16:0,48,1855	0/0:14,0:14:39.13:0,39,1538	0/0:21,0:21:60.21:0,60,2290	0/0:24,0:24:66.23:0,66,2509	0/0:18,0:18:48.16:0,48,1872	0/0:18,0:18:51.17:0,51,1959	0/0:17,0:17:48.16:0,48,1884	0/0:14,0:14:36.12:0,36,1428	1/1:0,11:11:30.02:655,30,0	1/1:1,10:11:24.08:615,24,0	0/0:18,0:18:51.18:0,51,2023	0/0:20,0:20:57.20:0,57,2262	0/0:29,0:29:87.30:0,87,3418	0/0:3,0:3:9.03:0,9,357
chr10	70746746	.	C	CT	1443.47	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.464;DP=574;FS=2.572;HRun=8;HaplotypeScore=59.0909;InbreedingCoeff=0.8524;MQ=75.75;MQ0=0;MQRankSum=-0.242;QD=28.30;ReadPosRankSum=0.866;VQSLOD=4.0955;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,950	0/0:10,0:10:27.01:0,27,247	0/0:20,0:18:3.31:0,3,140	0/0:21,1:17:3.94:0,4,142	0/0:18,0:18:51.03:0,51,467	0/0:17,0:17:48.01:0,48,435	0/0:21,0:21:60.01:0,60,544	0/0:33,0:33:84.03:0,84,766	0/0:12,0:12:33.02:0,33,302	0/0:18,0:18:48.02:0,48,439	0/0:21,0:21:57.02:0,57,517	0/0:12,0:12:33.02:0,33,302	0/0:9,0:9:27.01:0,27,247	0/0:24,1:25:31.41:0,31,541	0/0:22,0:22:60.01:0,60,544	0/0:15,0:15:39.02:0,39,357	0/0:23,0:23:60.02:0,60,545	0/0:21,0:21:63.03:0,63,576	0/0:19,0:19:18.36:0,18,329	0/0:30,0:30:81.03:0,81,737	0/0:14,0:14:36.02:0,36,330	0/0:26,0:26:69.03:0,69,632	0/0:21,0:21:54.03:0,54,494	0/0:14,0:14:42.02:0,42,384	0/0:21,0:21:60.03:0,60,549	1/1:2,30:32:65.81:1011,66,0	0/0:21,0:21:54.03:0,54,494	1/1:3,16:19:48.14:554,48,0
chr10	70747870	.	TC	T	318.47	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.218;DP=405;FS=0.947;HRun=8;HaplotypeScore=44.5053;InbreedingCoeff=0.7935;MQ=73.82;MQ0=2;MQRankSum=1.034;QD=19.90;ReadPosRankSum=1.068;VQSLOD=3.3285;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:51.14:0,51,599	0/0:3,0:3:9.03:0,9,109	0/0:21,0:16:30.90:0,31,317	0/0:23,0:13:11.70:0,12,226	0/0:9,1:10:1.11:0,1,285	0/0:16,0:16:36.09:0,36,422	0/0:22,0:22:60.16:0,60,698	0/0:16,0:16:21.03:0,21,220	0/0:23,0:23:66.18:0,66,777	0/0:17,0:17:39.11:0,39,462	0/0:14,0:14:36.11:0,36,427	0/0:12,0:12:30.09:0,30,362	0/0:14,0:14:36.11:0,36,435	0/0:12,0:12:27.05:0,27,302	0/0:10,0:10:27.08:0,27,326	0/0:10,0:10:26.86:0,27,314	0/0:31,0:31:93.29:0,93,1123	0/0:14,0:14:27.02:0,27,307	0/0:15,0:15:36.08:0,36,399	0/0:11,0:12:24.07:0,24,290	0/0:26,0:26:66.18:0,66,782	0/0:3,0:3:6.02:0,6,72	0/0:11,0:11:33.07:0,33,383	0/0:11,0:11:24.07:0,24,290	0/0:10,0:10:27.08:0,27,325	1/1:1,11:12:33.05:318,33,0	0/0:11,0:11:24.07:0,24,289	1/1:0,4:4:12.02:116,12,0
chr10	70748050	.	C	CTGTTA	4218.79	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-10.217;DP=523;FS=19.161;HRun=0;HaplotypeScore=89.4507;InbreedingCoeff=0.9908;MQ=90.12;MQ0=1;MQRankSum=-5.091;QD=79.60;ReadPosRankSum=3.228;VQSLOD=5.5746;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:75.26:2268,75,0	0/0:12,0:12:33.11:0,33,693	0/0:16,0:16:48.16:0,48,967	0/0:29,0:29:81.25:0,81,1540	0/0:12,0:12:33.11:0,33,692	0/0:28,0:28:78.27:0,78,1602	0/0:19,0:19:51.16:0,51,1032	0/0:26,0:26:78.26:0,78,1602	0/0:23,0:22:66.17:0,66,1287	0/0:31,0:31:93.32:0,93,1953	0/0:19,0:19:54.19:0,54,1133	0/0:12,0:12:36.12:0,36,756	0/0:22,0:22:66.23:0,66,1380	0/0:12,0:12:36.12:0,36,756	0/0:20,0:20:60.21:0,60,1259	0/0:20,0:20:60.21:0,60,1260	0/0:17,0:17:45.15:0,45,926	1/1:3,22:26:63.22:1951,63,0	0/0:12,0:12:36.12:0,36,737	0/0:22,0:22:63.22:0,63,1310	0/0:19,0:19:54.15:0,54,1022	0/0:13,0:13:39.13:0,39,819	0/0:6,0:6:15.05:0,15,315	0/0:23,0:23:63.22:0,63,1304	0/0:14,0:14:42.14:0,42,882	0/0:19,0:19:57.20:0,57,1196	0/0:15,0:15:42.14:0,42,882	0/0:9,0:9:27.09:0,27,567
chr10	70749480	.	GTTT	G	4675.75	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=12.089;DP=708;FS=0.790;HRun=9;HaplotypeScore=121.4316;InbreedingCoeff=0.9281;MQ=71.68;MQ0=0;MQRankSum=-2.972;QD=30.97;ReadPosRankSum=3.528;VQSLOD=3.5041;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:99:1354,99,0	0/0:16,0:16:42.11:0,42,777	0/0:11,0:10:14.72:0,15,193	0/1:11,0:12:1.40:1,0,67	0/0:22,0:23:63.19:0,63,1241	0/0:30,0:30:80.72:0,81,1720	0/0:25,0:28:84.24:0,84,1684	0/0:25,0:25:60.19:0,60,1166	0/0:18,0:18:51.17:0,51,1047	0/0:32,0:32:93.32:0,93,1940	0/0:25,0:25:75.26:0,75,1594	0/0:20,0:21:60.21:0,60,1254	1/1:4,24:28:62.82:893,63,0	0/0:29,0:29:81.26:0,81,1671	0/0:19,0:19:54.18:0,54,1111	0/0:33,0:33:90.31:0,90,1912	0/0:38,0:38:99:0,105,2131	1/1:3,20:23:57.18:809,57,0	0/0:19,0:19:51.18:0,51,1084	0/0:36,0:37:99:0,108,2195	0/0:23,0:23:63.13:0,63,1180	0/0:33,0:33:93.31:0,93,1910	1/1:0,20:20:54.17:766,54,0	1/1:5,27:32:60.66:852,61,0	0/0:18,0:19:48.11:0,48,902	0/0:2,0:29:37.84:0,38,148	0/0:31,0:31:87.30:0,87,1846	0/0:0,0:18:22.43:0,22,50
chr10	70750953	.	T	TA	658.83	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-6.183;DP=609;FS=6.492;HRun=9;HaplotypeScore=63.9920;InbreedingCoeff=0.8349;MQ=82.31;MQ0=0;MQRankSum=-0.599;QD=9.69;ReadPosRankSum=-0.040;VQSLOD=1.9569;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,30:37:27.74:447,28,0	0/0:5,0:5:15:0,15,130	0/0:21,0:21:35.49:0,35,313	0/1:14,0:14:2.23:2,0,109	0/0:35,0:35:60.92:0,61,621	0/0:30,0:30:56.86:0,57,486	0/0:24,0:24:59.95:0,60,521	0/0:32,0:33:67.96:0,68,570	0/0:16,0:16:41.95:0,42,357	0/0:23,0:23:35.94:0,36,306	0/0:20,0:20:41.94:0,42,364	0/0:16,0:16:44.99:0,45,391	0/0:22,0:22:44.94:0,45,391	0/0:26,0:26:65.96:0,66,573	0/0:31,0:31:80.96:0,81,700	0/0:31,0:31:80.93:0,81,696	0/0:21,0:21:56.99:0,57,495	1/1:6,11:17:30.08:332,30,0	0/0:13,0:13:26.95:0,27,230	0/0:22,0:22:26.87:0,27,223	0/0:12,0:12:32.97:0,33,282	0/0:20,0:20:38.94:0,39,336	0/0:17,0:17:17.91:0,18,152	0/0:18,0:18:53.95:0,54,459	0/0:23,0:23:53.82:0,54,453	0/0:31,0:31:56.91:0,57,488	0/0:24,0:24:62.98:0,63,547	0/0:7,0:7:14.91:0,15,118
chr10	70751833	.	T	TA	1442.97	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.803;DP=500;FS=0.535;HRun=0;HaplotypeScore=73.3680;InbreedingCoeff=0.9708;MQ=57.77;MQ0=13;MQRankSum=-2.234;QD=18.27;ReadPosRankSum=2.615;VQSLOD=5.9126;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,22:26:58.88:685,59,0	0/0:9,0:9:27.07:0,27,342	0/0:14,0:5:13.86:0,14,172	0/0:21,0:11:29.78:0,30,293	0/0:16,0:16:38.49:0,38,468	0/0:24,0:23:64.07:0,64,831	0/0:17,0:17:48.03:0,48,590	0/0:32,0:32:90.14:0,90,1123	0/0:27,0:27:78.22:0,78,1025	0/0:20,0:19:54.13:0,54,689	0/0:17,0:17:45.53:0,46,540	0/0:16,0:16:30.55:0,31,387	1/1:1,9:10:20.84:205,21,0	0/0:12,0:12:36.08:0,36,449	0/0:20,0:20:53.84:0,54,622	0/0:21,0:21:54.54:0,55,682	0/0:24,0:24:64.75:0,65,861	1/1:2,13:14:29.30:337,29,0	0/0:24,0:24:65.32:0,65,780	0/0:14,0:14:35.81:0,36,406	0/0:18,0:18:48.07:0,48,567	0/0:9,0:8:18.05:0,18,227	1/1:5,7:12:11.17:167,11,0	1/1:3,12:13:13.93:219,14,0	0/0:18,0:18:36.98:0,37,475	0/0:24,0:23:68.95:0,69,778	0/0:18,0:17:42.44:0,42,557	0/0:6,0:6:11.86:0,12,203
chr10	70751841	.	AGT	A	322.46	PASS	AB=0.907;AC=11;AF=0.220;AN=50;BaseQRankSum=3.959;DP=493;FS=4.107;HRun=0;HaplotypeScore=83.2903;InbreedingCoeff=-0.0731;MQ=55.68;MQ0=13;MQRankSum=0.444;QD=1.76;ReadPosRankSum=-0.188;VQSLOD=0.8948;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:22.82:0,23,227	0/0:9,0:9:12.04:0,12,178	./.	./.	0/1:14,1:15:26.39:26,0,79	0/1:23,0:22:3.65:4,0,367	0/0:11,0:11:8.99:0,9,120	0/0:34,0:34:8.61:0,9,130	0/1:23,3:25:47.70:48,0,111	0/1:19,1:19:35.85:57,0,36	0/1:13,1:14:14.78:15,0,204	0/0:10,0:16:18.02:0,18,193	0/0:8,0:9:6:0,6,51	0/1:12,0:12:7.98:8,0,139	0/1:17,4:21:42.69:43,0,235	0/0:21,1:22:9.28:0,9,541	0/0:26,0:26:24.08:0,24,356	0/0:12,0:14:8.93:0,9,75	0/0:28,0:28:6.02:0,6,82	0/0:8,0:13:12.02:0,12,141	0/1:16,1:17:17.82:18,0,125	0/0:10,0:9:15.03:0,15,186	0/0:13,0:12:3:0,3,27	0/0:19,0:17:3:0,3,25	1/1:8,6:14:15.04:164,15,0	0/1:10,0:20:5.15:79,0,5	0/0:11,1:17:15.02:0,15,155	./.
chr10	70753409	.	G	GC	1019.58	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=7.938;DP=611;FS=0.000;HRun=7;HaplotypeScore=67.0320;InbreedingCoeff=0.4691;MQ=74.33;MQ0=0;MQRankSum=-0.268;QD=8.64;ReadPosRankSum=-0.800;VQSLOD=0.6930;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:83.17:0,83,786	0/0:7,0:7:18.01:0,18,168	0/0:31,0:24:43.10:0,43,416	0/1:20,0:15:8.64:9,0,124	0/0:41,0:41:99:0,117,1099	0/0:22,0:22:66.08:0,66,623	0/0:13,0:13:33.05:0,33,318	0/0:26,0:26:63.06:0,63,591	0/0:17,0:17:44.97:0,45,400	0/0:29,0:29:77.97:0,78,729	0/0:26,0:26:69.09:0,69,660	0/0:18,0:18:48.01:0,48,437	0/1:25,0:25:19.10:75,0,19	0/0:21,0:21:51.05:0,51,481	0/0:23,0:23:59.98:0,60,554	0/0:15,0:15:36.01:0,36,333	0/0:21,0:21:54.08:0,54,521	0/0:19,0:19:43.76:0,44,453	0/0:21,0:21:59.99:0,60,558	0/0:24,0:24:56:0,56,558	0/0:19,0:19:33.52:0,34,414	0/0:22,0:22:45.35:0,45,484	0/1:17,0:17:13.38:13,0,17	0/1:21,0:21:6.83:37,0,7	0/0:16,0:16:42:0,42,383	1/1:2,24:26:71.40:804,71,0	0/0:29,0:28:78.07:0,78,737	1/1:2,7:9:20.89:226,21,0
chr10	70755083	.	GC	G	2047.45	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.658;DP=471;FS=6.617;HRun=9;HaplotypeScore=62.3949;InbreedingCoeff=0.9117;MQ=78.14;MQ0=0;MQRankSum=-1.171;QD=17.35;ReadPosRankSum=3.588;VQSLOD=3.7257;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,31:41:75.03:686,75,0	0/0:6,0:6:18.05:0,18,207	0/0:20,0:20:33.91:0,34,315	0/0:32,0:26:29.19:0,29,474	0/0:14,1:15:11.60:0,12,362	0/0:12,0:12:18.05:0,18,208	0/0:23,0:23:51.14:0,51,578	0/0:15,0:15:24.32:0,24,231	0/0:12,0:12:21.88:0,22,304	0/0:10,1:11:2.61:0,3,276	0/0:11,0:11:30.09:0,30,342	0/0:16,0:16:42.12:0,42,484	1/1:6,22:28:53.29:492,53,0	0/0:18,0:18:51.12:0,51,566	0/0:24,0:24:69.19:0,69,783	0/0:13,0:13:33.10:0,33,381	0/0:13,1:14:10.19:0,10,345	1/1:1,13:14:30.01:275,30,0	0/0:6,0:6:12.04:0,12,138	0/0:6,0:6:9.01:0,9,95	0/0:18,1:19:17.65:0,18,443	0/0:20,0:20:45.12:0,45,510	1/1:1,8:9:20.99:192,21,0	1/1:2,24:26:63.03:576,63,0	0/0:16,0:16:39.10:0,39,440	0/0:16,0:16:45.12:0,45,511	0/0:22,0:22:63.19:0,63,726	0/0:6,0:6:16.86:0,17,177
chr10	70755704	.	CT	C	2762.22	PASS	AB=0.966;AC=11;AF=0.196;AN=56;BaseQRankSum=9.605;DP=686;FS=0.366;HRun=10;HaplotypeScore=77.2213;InbreedingCoeff=0.8838;MQ=67.03;MQ0=3;MQRankSum=-1.355;QD=15.09;ReadPosRankSum=4.728;VQSLOD=4.0333;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,46:52:99:923,108,0	0/0:13,0:13:30.03:0,30,310	0/0:16,0:13:32.95:0,33,327	0/1:27,1:18:14.03:14,0,197	0/0:31,0:32:87.03:0,87,924	0/0:25,0:25:63.13:0,63,677	0/0:18,1:19:23.31:0,23,466	0/0:25,1:26:31.07:0,31,549	0/0:24,2:26:17.03:0,17,623	0/0:29,0:29:72.19:0,72,791	0/0:23,2:25:13.83:0,14,581	0/0:27,0:27:72.17:0,72,780	1/1:2,15:17:41.99:365,42,0	0/0:26,0:26:50.86:0,51,619	0/0:26,0:26:72.19:0,72,796	0/0:23,0:23:66.16:0,66,721	0/0:24,1:24:43.13:0,43,704	1/1:3,29:30:83.94:722,84,0	0/0:23,1:25:39.93:0,40,635	0/0:31,1:32:58.07:0,58,850	0/0:21,0:21:57.11:0,57,603	0/0:12,0:13:35.92:0,36,372	1/1:5,19:25:37.88:318,38,0	1/1:4,25:29:68.97:599,69,0	0/0:14,0:15:41.93:0,42,437	0/0:28,0:28:72.08:0,72,766	0/0:17,0:17:45.10:0,45,487	0/0:14,0:14:36.10:0,36,395
chr10	70757292	.	GACAC	G	93.81	PASS	AB=0.901;AC=9;AF=0.214;AN=42;BaseQRankSum=2.927;DP=492;FS=3.451;HRun=0;HaplotypeScore=79.7632;InbreedingCoeff=0.2369;MQ=58.72;MQ0=15;MQRankSum=-0.931;QD=0.93;ReadPosRankSum=1.844;VQSLOD=1.5899;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:12.51:0,13,269	0/0:5,0:4:6.02:0,6,127	./.	./.	1/1:6,0:6:3.01:43,3,0	1/1:15,0:15:3.01:44,3,0	0/0:26,0:25:6.02:0,6,133	./.	0/0:13,0:13:6.02:0,6,114	./.	./.	0/0:18,0:16:9.03:0,9,180	0/0:21,0:21:17.80:0,18,324	0/0:17,0:17:14.98:0,15,234	0/0:13,0:13:9.03:0,9,155	0/1:12,3:15:12.24:39,0,12	0/0:32,0:31:15.52:0,16,285	0/1:15,0:17:43.77:44,0,85	./.	0/0:12,0:12:3.01:0,3,41	0/0:48,0:43:18.53:0,19,328	0/0:12,0:12:12.02:0,12,226	0/0:10,0:10:3.01:0,3,64	0/1:39,1:40:15.13:15,0,487	0/0:11,0:11:9.50:0,10,179	./.	0/0:18,0:17:11.98:0,12,180	1/1:6,0:7:3:28,3,0
chr10	70759938	.	A	AC	6518.16	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-12.905;DP=662;FS=17.029;HRun=0;HaplotypeScore=62.8423;InbreedingCoeff=0.9787;MQ=88.34;MQ0=0;MQRankSum=-1.595;QD=44.64;ReadPosRankSum=3.065;VQSLOD=3.1219;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,53:53:99:2446,154,0	0/0:4,0:4:12.04:0,12,168	0/0:16,0:16:45.15:0,45,626	0/0:30,0:30:80.72:0,81,1054	0/0:9,0:9:27.09:0,27,377	0/0:19,0:19:57.19:0,57,795	0/0:33,0:33:93.30:0,93,1282	0/0:29,0:29:84.27:0,84,1158	0/0:23,0:23:69.22:0,69,948	0/0:9,0:9:27.09:0,27,378	0/0:6,0:6:18.06:0,18,252	0/0:31,0:31:87.29:0,87,1216	1/1:1,33:34:93.32:1483,93,0	0/0:33,0:33:99:0,99,1367	0/0:33,0:33:99:0,99,1380	0/0:31,0:31:93.31:0,93,1301	0/0:41,0:41:99:0,120,1676	1/1:0,30:30:84.29:1343,84,0	0/0:29,0:29:87.29:0,87,1211	0/0:7,0:7:21.07:0,21,293	0/0:53,0:53:99:0,150,2075	0/0:11,0:11:33.11:0,33,462	1/1:0,5:5:12.04:192,12,0	1/1:0,24:24:66.23:1055,66,0	0/0:12,0:12:36.12:0,36,504	0/0:17,0:17:51.17:0,51,713	0/0:35,0:35:99:0,102,1426	0/0:5,0:5:15.05:0,15,210
chr10	70763252	.	AAAAG	A	2899.85	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.547;DP=593;FS=1.663;HRun=0;HaplotypeScore=96.7661;InbreedingCoeff=0.9986;MQ=74.92;MQ0=1;MQRankSum=-3.654;QD=32.95;ReadPosRankSum=2.162;VQSLOD=3.4582;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:18:33.41:525,33,0	0/0:13,0:13:39.13:0,39,927	0/0:16,0:14:35.98:0,36,610	0/0:11,0:11:26.96:0,27,595	0/0:23,0:23:66.22:0,66,1609	0/0:23,0:23:63.19:0,63,1487	0/0:20,0:20:54.16:0,54,1251	0/0:34,0:34:87.23:0,87,1929	0/0:29,0:29:81.25:0,81,1935	0/0:17,0:17:51.17:0,51,1182	0/0:19,0:19:54.17:0,54,1285	0/0:19,0:19:57.20:0,57,1399	1/1:1,20:21:48.13:824,48,0	0/0:18,0:18:54.17:0,54,1238	0/0:22,0:22:63.20:0,63,1443	0/0:25,0:25:75.24:0,75,1765	0/0:23,0:23:63.21:0,63,1467	1/1:1,17:18:42.11:762,42,0	0/0:20,0:20:57.19:0,57,1352	0/0:34,0:34:99:0,102,2487	0/0:21,0:21:63.22:0,63,1573	0/0:20,0:20:57.19:0,57,1418	1/1:1,17:18:39:582,39,0	1/1:0,13:12:21.07:381,21,0	0/0:35,0:35:99:0,105,2413	0/0:20,0:20:57.18:0,57,1309	0/0:30,0:27:90.29:0,90,2064	0/0:13,0:13:35.08:0,35,844
chr10	70765370	.	GTTTA	G	3560.82	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.788;DP=731;FS=4.195;HRun=0;HaplotypeScore=154.3008;InbreedingCoeff=0.9993;MQ=81.84;MQ0=0;MQRankSum=-13.559;QD=42.39;ReadPosRankSum=2.219;VQSLOD=4.0537;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:57.17:957,57,0	0/0:18,0:18:54.19:0,54,1539	0/0:24,0:24:72.25:0,72,2019	0/0:18,0:18:52.03:0,52,1413	0/0:26,0:26:78.27:0,78,2210	0/0:23,0:23:69.22:0,69,1928	0/0:26,0:26:78.27:0,78,2227	0/0:37,0:37:99:0,108,3069	0/0:32,0:32:96.33:0,96,2782	0/0:29,0:29:87.30:0,87,2484	0/0:25,0:25:75.26:0,75,2173	0/0:35,0:35:99:0,105,3039	1/1:2,19:21:60.19:1073,60,0	0/0:28,0:28:84.29:0,84,2389	0/0:31,0:31:93.31:0,93,2550	0/0:31,0:31:93.32:0,93,2660	0/0:33,0:33:99:0,99,2865	1/1:1,7:8:24.04:415,24,0	0/0:29,0:29:87.30:0,87,2510	0/0:33,0:33:99:0,99,2846	0/0:33,0:33:96.33:0,96,2767	0/0:38,0:38:99:0,114,3293	1/1:1,17:18:41.70:660,42,0	1/1:1,15:16:29.98:457,30,0	0/0:22,0:22:66.21:0,66,1843	0/0:42,0:42:99:0,126,3574	0/0:23,0:23:69.24:0,69,2000	0/0:11,0:11:33.11:0,33,956
chr10	70765380	.	G	GT	2447.80	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.131;DP=742;FS=2.911;HRun=0;HaplotypeScore=117.3807;InbreedingCoeff=0.9984;MQ=82.26;MQ0=0;MQRankSum=-12.910;QD=30.98;ReadPosRankSum=2.772;VQSLOD=3.5048;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:57.18:768,57,0	0/0:15,0:15:45.14:0,45,605	0/0:25,0:25:69.23:0,69,938	0/0:20,0:20:53.31:0,53,649	0/0:31,0:31:89.59:0,90,1162	0/0:25,0:25:75.25:0,75,1047	0/0:25,0:25:72.23:0,72,989	0/0:36,0:36:99:0,108,1454	0/0:33,0:33:99:0,99,1367	0/0:35,0:35:99:0,99,1363	0/0:30,0:30:84.20:0,84,1130	0/0:34,0:34:99:0,102,1423	1/1:0,19:19:57.19:800,57,0	0/0:29,0:29:87.28:0,87,1198	0/0:28,0:28:81.27:0,81,1121	0/0:30,0:30:90.29:0,90,1240	0/0:36,0:36:99:0,105,1446	1/1:0,7:7:21.07:305,21,0	0/0:34,0:34:99:0,102,1392	0/0:31,0:31:93.30:0,93,1280	0/0:35,0:35:99:0,99,1360	0/0:33,0:33:96.31:0,96,1321	1/1:0,17:17:33.58:446,34,0	1/1:1,15:16:24.04:303,24,0	0/0:22,0:22:60.18:0,60,816	0/0:45,0:45:99:0,129,1725	0/0:21,0:21:63.21:0,63,881	0/0:10,0:10:30.09:0,30,403
chr10	70765442	.	TG	T	3600.39	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.296;DP=762;FS=3.579;HRun=2;HaplotypeScore=95.2741;InbreedingCoeff=0.9986;MQ=82.16;MQ0=0;MQRankSum=-2.703;QD=30.51;ReadPosRankSum=4.018;VQSLOD=3.3578;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:36:78.25:1012,78,0	0/0:13,0:13:39.13:0,39,580	0/0:26,0:26:55.11:0,55,992	0/0:23,0:23:60.15:0,60,816	0/0:31,0:31:93.27:0,93,1332	0/0:28,0:28:84.27:0,84,1236	0/0:28,0:28:78.22:0,78,1143	0/0:37,0:37:99:0,111,1646	0/0:26,0:26:75.25:0,75,1123	0/0:37,0:37:99:0,111,1640	0/0:25,0:25:75.25:0,75,1106	0/0:34,0:34:99:0,99,1443	1/1:1,26:27:75.24:971,75,0	0/0:36,0:36:99:0,108,1616	0/0:25,0:25:75.23:0,75,1101	0/0:25,0:25:75.24:0,75,1104	0/0:38,0:38:99:0,114,1709	1/1:0,13:13:30.10:389,30,0	0/0:21,0:21:57.17:0,57,815	0/0:26,0:26:75.25:0,75,1122	0/0:65,0:65:99:0,190,2788	0/0:17,0:17:48.16:0,48,719	1/1:4,10:14:26.35:332,26,0	1/1:1,27:28:69.22:895,69,0	0/0:22,0:22:66.22:0,66,989	0/0:26,0:26:78.24:0,78,1132	0/0:28,0:28:84.28:0,84,1256	0/0:7,0:7:21.07:0,21,315
chr10	70765954	.	TA	T	5801.78	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.075;DP=887;FS=6.157;HRun=2;HaplotypeScore=84.6212;InbreedingCoeff=1.0000;MQ=80.69;MQ0=1;MQRankSum=-7.418;QD=36.95;ReadPosRankSum=5.157;VQSLOD=5.2120;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,43:44:99:1597,123,0	0/0:14,0:14:42.11:0,42,602	0/0:24,1:25:65.76:0,66,891	0/0:23,0:23:60.62:0,61,829	0/0:27,0:27:78.26:0,78,1150	0/0:15,0:15:42.13:0,42,605	0/0:37,0:37:99:0,111,1624	0/0:40,0:40:99:0,114,1677	0/0:40,0:40:99:0,117,1724	0/0:38,1:39:75.41:0,75,1585	0/0:20,0:20:56.86:0,57,820	0/0:51,0:51:99:0,144,2123	1/1:0,23:23:69.22:896,69,0	0/0:48,0:48:99:0,138,2026	0/0:39,0:39:99:0,111,1645	0/0:35,0:35:99:0,105,1509	0/0:32,0:32:96.33:0,96,1438	1/1:0,31:31:90.29:1168,90,0	0/0:23,0:23:69.22:0,69,1004	0/0:28,0:28:84.26:0,84,1208	0/0:39,0:39:99:0,111,1618	0/0:41,0:41:99:0,117,1702	1/1:0,23:23:63.20:817,63,0	1/1:1,34:35:99:1324,102,0	0/0:25,0:25:72.19:0,72,1015	0/0:42,0:42:99:0,123,1832	0/0:31,0:31:93.30:0,93,1369	0/0:16,0:16:48.16:0,48,714
chr10	70768244	.	A	AC	5828.64	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.020;DP=654;FS=1.138;HRun=1;HaplotypeScore=76.1609;InbreedingCoeff=1.0000;MQ=83.64;MQ0=0;MQRankSum=-6.912;QD=41.63;ReadPosRankSum=0.656;VQSLOD=5.1778;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,40:43:99:1797,120,0	0/0:15,0:15:45.15:0,45,584	0/0:27,0:27:56.21:0,56,830	0/0:13,0:13:39.09:0,39,478	0/0:23,0:23:69.22:0,69,896	0/0:25,0:25:75.24:0,75,974	0/0:27,0:27:81.26:0,81,1052	0/0:16,0:16:45.14:0,45,573	0/0:22,0:22:60.16:0,60,749	0/0:15,0:15:42.13:0,42,540	0/0:15,0:15:45.12:0,45,567	0/0:32,0:32:93.29:0,93,1193	1/1:3,25:28:81.27:1211,81,0	0/0:23,0:23:69.22:0,69,896	0/0:27,0:27:81.25:0,81,1038	0/0:21,0:21:63.19:0,63,803	0/0:36,0:36:99:0,99,1256	1/1:1,22:23:69.16:986,69,0	0/0:20,0:20:60.18:0,60,763	0/0:29,0:29:81.26:0,81,1052	0/0:24,0:24:72.23:0,72,935	0/0:26,0:26:78.25:0,78,1011	1/1:1,26:27:78.22:1138,78,0	1/1:3,16:19:48.15:697,48,0	0/0:25,0:25:75.20:0,75,931	0/0:18,0:18:54.18:0,54,701	0/0:21,0:21:63.17:0,63,786	0/0:14,0:14:42.14:0,42,545
chr10	70768296	.	T	TG	4876.32	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.878;DP=686;FS=0.000;HRun=6;HaplotypeScore=83.4169;InbreedingCoeff=0.9988;MQ=90.00;MQ0=0;MQRankSum=-4.502;QD=31.06;ReadPosRankSum=2.110;VQSLOD=5.2003;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,24:30:63.16:774,63,0	0/0:11,0:11:27.05:0,27,275	0/0:28,0:28:60.09:0,60,595	0/0:27,0:27:58.66:0,59,579	0/0:16,0:16:36.08:0,36,367	0/0:27,0:27:72.14:0,72,727	0/0:31,0:31:81.18:0,81,826	0/0:31,0:31:81.17:0,81,820	0/0:21,0:21:54.10:0,54,543	0/0:24,0:24:66.14:0,66,667	0/0:17,0:17:42.08:0,42,428	0/0:29,0:29:87.20:0,87,887	1/1:2,29:31:80.84:1016,81,0	0/0:28,0:28:78.15:0,78,788	0/0:27,0:27:72.16:0,72,735	0/0:16,0:16:42.09:0,42,429	0/0:37,0:37:99:0,105,1064	1/1:1,17:18:54.17:678,54,0	0/0:21,0:21:54.11:0,54,545	0/0:35,0:35:96.22:0,96,979	0/0:23,0:23:60.13:0,60,612	0/0:27,0:27:80.55:0,81,803	1/1:3,21:24:63.20:792,63,0	1/1:2,19:21:53.97:667,54,0	0/0:24,0:24:66.14:0,66,672	1/1:4,17:21:20.55:573,21,0	0/0:29,0:29:84.17:0,84,850	1/1:1,10:11:30.10:377,30,0
chr10	70770249	.	GC	G	3047.77	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.377;DP=514;FS=7.469;HRun=6;HaplotypeScore=53.4653;InbreedingCoeff=0.9948;MQ=89.69;MQ0=0;MQRankSum=-2.432;QD=25.61;ReadPosRankSum=1.902;VQSLOD=3.8365;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,28:34:69.17:741,69,0	0/0:10,0:10:27.09:0,27,351	0/0:23,0:23:50.73:0,51,709	0/0:18,0:18:35.85:0,36,428	0/0:28,0:28:81.24:0,81,1033	0/0:23,0:23:69.20:0,69,879	0/0:21,0:21:57.19:0,57,749	0/0:26,0:27:57.12:0,57,693	0/0:10,0:10:24.07:0,24,302	0/0:13,0:13:36.11:0,36,461	0/0:14,0:14:42.14:0,42,552	0/0:22,0:22:63.20:0,63,828	1/1:1,14:15:33.08:355,33,0	0/0:22,0:22:63.20:0,63,823	0/0:16,0:16:45.14:0,45,579	0/0:15,0:15:42.12:0,42,538	0/0:18,0:18:51.14:0,51,654	1/1:0,13:13:36.09:387,36,0	0/0:17,0:17:42.11:0,42,521	0/0:21,0:21:63.19:0,63,813	0/0:29,0:29:75.23:0,75,971	0/0:6,0:6:18.06:0,18,236	1/1:1,11:12:29.94:322,30,0	1/1:0,20:20:60.15:644,60,0	0/0:17,0:17:48.16:0,48,632	1/1:0,20:20:60.14:636,60,0	0/0:25,0:25:72.23:0,72,942	1/1:0,5:5:15.04:161,15,0
chr10	70772939	.	G	GC	1045.74	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.255;DP=677;FS=0.562;HRun=0;HaplotypeScore=86.8076;InbreedingCoeff=0.9480;MQ=88.64;MQ0=0;MQRankSum=-11.042;QD=19.73;ReadPosRankSum=2.452;VQSLOD=5.8076;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:33:83.88:711,84,0	0/0:10,0:10:30.10:0,30,419	0/0:28,0:28:84.07:0,84,1142	0/0:23,0:23:66.16:0,66,866	0/0:20,0:20:60.19:0,60,821	0/0:16,0:16:48.14:0,48,652	0/0:26,0:26:75.25:0,75,1048	0/0:31,0:31:93.31:0,93,1301	0/0:27,0:27:81.27:0,81,1132	0/0:22,0:22:66.22:0,66,918	0/0:19,0:19:54.18:0,54,748	0/0:24,0:24:66.22:0,66,922	0/0:31,0:31:93.30:0,93,1281	0/0:29,0:29:87.29:0,87,1214	0/0:32,0:32:90.30:0,90,1258	0/0:28,0:28:81.27:0,81,1131	0/0:45,0:45:99:0,135,1867	0/0:21,0:21:63.21:0,63,880	0/0:21,0:21:63.21:0,63,876	0/0:22,0:22:60.15:0,60,795	0/0:37,0:37:99:0,111,1515	0/0:22,0:22:63.21:0,63,875	0/0:16,0:16:48.13:0,48,633	0/0:24,0:24:72.22:0,72,988	0/0:25,0:25:75.22:0,75,999	1/1:1,15:16:5.83:359,6,0	0/0:25,0:25:66.22:0,66,922	1/1:0,4:4:12:106,12,0
chr10	70772941	.	GGAGTT	G	2085.82	PASS	AB=0.531;AC=5;AF=0.089;AN=56;BaseQRankSum=11.518;DP=675;FS=1.153;HRun=0;HaplotypeScore=138.4545;InbreedingCoeff=0.7648;MQ=89.22;MQ0=0;MQRankSum=-10.751;QD=39.36;ReadPosRankSum=1.881;VQSLOD=3.8492;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:86.98:1290,87,0	0/0:10,0:10:30.09:0,30,924	0/0:28,0:28:70.97:0,71,2509	0/0:24,0:24:72.21:0,72,2084	0/0:21,0:21:63.20:0,63,1948	0/0:16,0:16:45.15:0,45,1469	0/0:27,0:27:81.28:0,81,2515	0/0:31,0:31:93.30:0,93,2833	0/0:26,0:26:78.27:0,78,2578	0/0:23,0:23:69.23:0,69,2198	0/0:18,0:18:54.16:0,54,1558	0/0:22,0:22:66.23:0,66,2183	0/0:31,0:31:90.31:0,90,2935	0/0:28,0:28:84.29:0,84,2698	0/0:32,0:32:96.32:0,96,3078	0/0:27,0:27:81.26:0,81,2556	0/0:45,0:45:99:0,135,4344	0/0:20,0:20:60.21:0,60,1998	0/0:21,0:21:63.19:0,63,1898	0/0:23,0:23:63.17:0,63,1929	0/0:35,0:35:99:0,105,3369	0/0:23,0:23:69.23:0,69,2084	0/0:14,0:14:39.13:0,39,1237	0/0:27,0:27:81.28:0,81,2564	0/0:25,0:25:75.24:0,75,2385	0/1:2,15:17:48.80:728,0,49	0/0:25,0:25:75.26:0,75,2415	1/1:0,4:4:12.04:194,12,0
chr10	70774366	.	TGCACAC	T	2771.99	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=10.346;DP=1032;FS=5.192;HRun=0;HaplotypeScore=211.5736;InbreedingCoeff=1.0000;MQ=68.53;MQ0=1;MQRankSum=-9.220;QD=30.80;ReadPosRankSum=1.165;VQSLOD=2.9583;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,40:54:63.21:1328,63,0	0/0:16,0:16:45.15:0,45,1382	0/0:32,0:25:42.15:0,42,1059	0/0:31,0:30:63.43:0,63,1588	0/0:22,0:22:66.23:0,66,2077	0/0:20,0:20:57.15:0,57,1776	0/0:35,0:35:93.17:0,93,2662	0/0:46,0:46:99:0,108,2801	0/0:51,0:51:99:0,132,4164	0/0:48,0:48:99:0,132,3909	0/0:17,0:16:48.10:0,48,1374	0/0:56,0:56:99:0,144,4549	0/0:50,0:49:99:0,141,4527	0/0:49,0:49:99:0,132,3945	0/0:61,0:61:99:0,147,4428	0/0:51,0:51:99:0,126,3913	0/0:41,0:41:99:0,108,3026	0/0:29,0:29:72.19:0,72,2218	0/0:21,0:21:57.14:0,57,1691	0/0:37,0:37:90.21:0,90,2727	0/0:91,0:91:99:0,226,6800	0/0:33,0:33:90.27:0,90,2791	0/0:21,0:21:57.11:0,57,1698	0/0:41,0:41:99:0,105,3237	0/0:23,0:23:66.18:0,66,2082	1/1:4,32:36:78.13:1565,78,0	0/0:19,0:19:48.11:0,48,1545	./.
chr10	70774584	.	ACC	A	2168.10	PASS	AB=0.827;AC=10;AF=0.179;AN=56;BaseQRankSum=12.049;DP=995;FS=6.470;HRun=2;HaplotypeScore=143.3377;InbreedingCoeff=0.4456;MQ=52.89;MQ0=24;MQRankSum=0.922;QD=10.28;ReadPosRankSum=3.964;VQSLOD=0.7754;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:38:13.73:329,0,14	0/0:11,0:11:24.07:0,24,367	0/0:64,0:12:2.38:0,2,145	0/0:76,0:15:7.63:0,8,198	0/0:21,0:21:62.78:0,63,924	0/0:20,0:20:12.55:0,13,570	0/0:47,0:46:99:0,100,1477	0/0:35,0:33:92.17:0,92,885	0/0:42,0:43:99:0,106,1622	0/0:35,0:34:78.55:0,79,972	0/0:24,0:23:2.39:0,2,519	0/0:46,0:46:65.41:0,65,1610	1/1:5,30:36:30.30:702,30,0	0/0:36,0:36:59.25:0,59,1186	0/0:39,0:39:31.09:0,31,1265	0/0:46,0:46:66.94:0,67,1605	0/0:33,0:33:51.63:0,52,1056	0/1:8,0:16:24.50:25,0,62	0/0:20,0:19:44.01:0,44,451	0/0:21,0:20:58.18:0,58,606	0/0:87,0:83:99:0,170,2326	0/0:26,0:27:38.44:0,38,722	1/1:10,1:12:32.98:302,33,0	1/1:6,48:56:13.83:753,14,0	0/0:28,0:28:57.49:0,57,1043	0/1:38,0:35:99:186,0,198	0/0:19,0:19:32.44:0,32,491	0/1:6,0:8:13.60:31,0,14
chr10	70774585	.	CCA	C	1716.54	PASS	AB=0.902;AC=20;AF=0.357;AN=56;BaseQRankSum=8.549;DP=995;FS=4.595;HRun=0;HaplotypeScore=144.7655;InbreedingCoeff=-0.2825;MQ=52.89;MQ0=25;MQRankSum=1.277;QD=2.75;ReadPosRankSum=3.539;VQSLOD=2.4880;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:39:31.98:0,32,215	0/1:10,0:11:18.06:18,0,187	0/0:65,0:13:6:0,6,80	0/0:76,0:16:9:0,9,100	0/0:21,0:21:38.96:0,39,555	0/1:16,4:20:68.65:69,0,333	0/1:45,3:47:48.13:48,0,682	0/0:36,0:32:20.10:0,20,252	0/0:43,0:43:38.46:0,38,996	0/1:33,3:35:35.53:36,0,443	0/1:21,3:23:99:133,0,199	0/1:37,5:44:99:107,0,1005	1/1:31,4:35:50.48:442,50,0	0/1:31,5:36:41.57:42,0,694	0/1:34,5:39:99:162,0,735	0/1:39,7:46:91.32:91,0,878	0/1:27,3:33:42.77:43,0,615	0/0:17,0:15:14.51:0,15,156	0/1:17,0:19:13.30:13,0,135	0/0:20,0:19:16.03:0,16,199	0/1:81,4:84:99:123,0,976	0/1:25,2:27:53.57:54,0,450	1/1:12,0:12:5.81:36,6,0	0/1:54,2:56:27.13:395,0,27	0/1:25,1:28:22.87:23,0,595	0/0:37,0:35:55.98:0,56,445	0/1:16,3:19:51.82:52,0,275	0/0:8,0:10:19.19:0,19,139
chr10	70775141	.	TG	T	1229.44	PASS	AB=0.856;AC=17;AF=0.304;AN=56;BaseQRankSum=4.526;DP=423;FS=17.445;HRun=11;HaplotypeScore=54.8850;InbreedingCoeff=0.3836;MQ=81.85;MQ0=0;MQRankSum=-0.380;QD=7.27;ReadPosRankSum=5.336;VQSLOD=0.3355;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,17:33:40.93:325,41,0	0/0:6,0:6:6.02:0,6,64	0/0:12,0:12:7.60:0,8,46	0/0:23,0:24:21.73:0,22,206	0/0:10,0:11:18.03:0,18,183	0/0:13,1:14:20.82:0,21,191	0/0:26,0:26:45.06:0,45,449	0/0:16,0:16:21.01:0,21,201	0/0:13,0:13:24.04:0,24,245	0/1:7,1:8:18.62:19,0,26	0/0:5,0:5:6:0,6,57	0/1:13,0:13:5.74:6,0,139	1/1:2,12:14:10.22:245,10,0	0/0:26,1:27:29.45:0,29,492	0/0:17,1:17:2.39:0,2,216	0/1:11,1:13:3.93:4,0,135	0/0:30,1:31:26.46:0,26,473	1/1:4,13:17:35.96:296,36,0	0/0:10,1:11:15.01:0,15,148	0/0:7,0:7:9.02:0,9,96	0/0:22,0:22:15:0,15,143	0/1:4,1:5:18.62:19,0,26	1/1:4,8:13:7.42:181,7,0	0/1:6,14:20:1.97:192,0,2	0/0:11,0:11:15.02:0,15,152	0/1:8,4:12:37.25:37,0,52	0/1:15,0:15:6.58:7,0,142	1/1:2,4:6:8.99:74,9,0
chr10	70775199	.	GTCAC	G	282.05	PASS	AB=0.871;AC=8;AF=0.143;AN=56;BaseQRankSum=4.526;DP=451;FS=14.922;HRun=0;HaplotypeScore=84.1460;InbreedingCoeff=-0.1710;MQ=70.57;MQ0=18;MQRankSum=-1.295;QD=2.56;ReadPosRankSum=-2.780;VQSLOD=-0.5315;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:32.89:0,33,259	0/0:5,0:5:5.61:0,6,121	0/0:37,0:18:54.01:0,54,531	0/0:41,0:31:66.15:0,66,670	0/0:11,0:11:29.91:0,30,426	0/1:18,1:19:15.94:16,0,416	0/0:15,0:14:37.16:0,37,448	0/0:19,0:18:28.79:0,29,392	0/0:16,0:15:35.94:0,36,553	0/0:15,0:14:41.74:0,42,485	0/0:9,0:9:24.02:0,24,340	0/1:13,1:14:97.93:108,0,98	0/0:17,0:17:43.76:0,44,385	0/1:11,0:13:40.39:40,0,170	0/1:12,1:12:29.77:30,0,401	0/0:17,0:17:48.05:0,48,672	0/1:27,1:26:99:108,0,344	0/0:21,0:18:34.70:0,35,331	0/1:9,0:9:14.21:14,0,193	0/0:6,0:5:12.03:0,12,229	0/0:31,0:30:71.75:0,72,1034	0/1:6,3:9:43.92:44,0,106	0/0:11,0:11:19.97:0,20,126	0/0:18,0:18:23.66:0,24,189	0/0:13,1:13:29.95:0,30,394	0/0:11,0:11:23.51:0,24,231	0/0:10,0:9:23.97:0,24,287	0/1:2,0:4:21.92:57,0,22
chr10	70775200	.	TCACA	T	405.63	PASS	AB=0.948;AC=13;AF=0.283;AN=46;BaseQRankSum=4.163;DP=467;FS=24.642;HRun=0;HaplotypeScore=86.1551;InbreedingCoeff=0.2629;MQ=67.32;MQ0=21;MQRankSum=-0.549;QD=3.22;ReadPosRankSum=-1.210;VQSLOD=0.1072;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:0:0,0,0	0/0:5,0:5:6.01:0,6,73	./.	./.	0/0:10,0:12:17.78:0,18,276	0/1:20,0:20:20.73:21,0,317	0/0:18,0:17:5.99:0,6,290	./.	0/0:18,0:16:15.02:0,15,297	0/0:15,0:14:15:0,15,218	0/0:10,0:10:8.95:0,9,157	1/1:7,5:14:9.49:134,9,0	0/0:17,0:17:9.02:0,9,108	0/1:13,0:13:10.41:32,0,10	0/1:11,0:12:22.12:22,0,251	0/0:15,0:17:27.08:0,27,530	0/1:24,3:26:85.71:220,0,86	0/0:20,0:18:4.95:0,5,38	0/1:13,0:12:8.78:9,0,139	0/0:7,0:6:12.03:0,12,193	0/0:33,0:32:41.84:0,42,669	1/1:9,0:9:3.01:40,3,0	./.	./.	0/0:15,0:14:14.77:0,15,224	1/1:11,0:12:3:28,3,0	0/0:11,0:9:12.01:0,12,141	1/1:4,0:4:5.80:40,6,0
chr10	70775877	.	GC	G	4387.20	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.898;DP=640;FS=1.116;HRun=7;HaplotypeScore=65.3412;InbreedingCoeff=0.9984;MQ=85.39;MQ0=0;MQRankSum=-4.060;QD=26.92;ReadPosRankSum=2.864;VQSLOD=5.6463;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,37:39:99:1041,102,0	0/0:13,0:13:36.08:0,36,426	0/0:19,1:20:21.05:0,21,535	0/0:24,1:24:63.18:0,63,746	0/0:23,0:23:63.20:0,63,791	0/0:22,0:22:63.20:0,63,792	0/0:20,0:20:54.16:0,54,667	0/0:26,0:26:60.19:0,60,755	0/0:24,0:24:63.20:0,63,792	0/0:19,0:19:48.15:0,48,600	0/0:13,0:13:36.10:0,36,440	0/0:24,0:24:69.18:0,69,838	1/1:1,17:18:45.10:459,45,0	0/0:16,0:16:42.12:0,42,516	0/0:30,0:30:87.27:0,87,1081	0/0:24,0:24:72.22:0,72,892	0/0:27,0:27:78.23:0,78,967	1/1:1,15:16:42.09:429,42,0	0/0:15,0:15:30.10:0,30,377	0/0:25,0:25:66.21:0,66,830	0/0:39,0:39:99:0,111,1357	0/0:18,0:18:51.16:0,51,642	1/1:3,23:26:66.08:660,66,0	1/1:1,26:27:72.16:735,72,0	0/0:25,0:25:72.22:0,72,894	1/1:2,28:30:84.17:850,84,0	0/0:29,0:29:75.24:0,75,943	1/1:0,7:7:21.05:214,21,0
chr10	70776060	.	CT	C	609.77	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=12.130;DP=595;FS=3.002;HRun=1;HaplotypeScore=84.1102;InbreedingCoeff=0.8828;MQ=57.40;MQ0=11;MQRankSum=0.826;QD=4.65;ReadPosRankSum=3.795;VQSLOD=0.8626;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:22.48:173,22,0	0/0:3,0:3:8.95:0,9,83	0/0:37,4:11:16.88:0,17,177	0/0:53,2:18:24.73:0,25,218	0/0:15,0:15:36.08:0,36,466	0/0:19,0:19:57.19:0,57,793	0/0:36,0:36:99:0,105,1337	0/0:25,0:25:62.70:0,63,760	0/0:22,0:22:63.14:0,63,819	0/0:12,0:11:33.11:0,33,444	0/0:11,0:11:30.08:0,30,398	0/0:33,0:33:92.22:0,92,1165	1/1:15,0:15:28.51:107,29,0	0/0:15,0:15:29:0,29,463	0/0:29,0:29:87.29:0,87,1224	0/0:12,0:13:33.76:0,34,478	0/0:25,0:25:63.12:0,63,800	0/1:17,0:17:0.05:59,0,0	0/0:11,0:10:30.06:0,30,372	0/0:13,0:13:32.90:0,33,431	0/0:31,0:31:83.69:0,84,1058	0/0:22,0:22:66.18:0,66,874	1/1:15,1:16:26.83:104,27,0	1/1:37,0:37:42.05:229,42,0	0/0:16,0:16:42.13:0,42,568	1/1:15,0:15:0.23:71,0,0	0/0:15,0:15:41.95:0,42,546	1/1:6,0:6:14.22:47,14,0
chr10	70776061	.	TC	T	2956.61	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.158;DP=600;FS=4.950;HRun=7;HaplotypeScore=74.7687;InbreedingCoeff=0.9626;MQ=57.42;MQ0=12;MQRankSum=-0.670;QD=22.57;ReadPosRankSum=3.427;VQSLOD=3.8564;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:24:50.14:499,50,0	0/0:3,0:3:6.02:0,6,74	0/0:41,0:10:7.09:0,7,118	0/0:57,0:18:17.76:0,18,178	0/0:14,0:14:36.10:0,36,438	0/0:19,0:19:57.18:0,57,715	0/0:36,0:36:87.27:0,87,1091	0/0:27,0:27:47.47:0,47,525	0/0:22,0:22:60.12:0,60,718	0/0:12,0:11:33.10:0,33,403	0/0:11,0:11:33.08:0,33,388	0/0:34,0:34:78.18:0,78,955	1/1:1,14:15:36.08:367,36,0	0/0:14,0:14:39.10:0,39,467	0/0:29,0:29:87.27:0,87,1082	0/0:14,0:14:38.76:0,39,476	0/0:25,0:25:63.11:0,63,717	1/1:4,13:17:33.47:389,33,0	0/0:12,0:11:33.09:0,33,399	0/0:13,0:13:30.10:0,30,375	0/0:31,0:32:80.83:0,81,973	0/0:22,0:22:63.20:0,63,789	1/1:2,14:16:36.55:367,37,0	1/1:3,34:37:95.88:959,96,0	0/0:16,0:16:45.13:0,45,553	1/1:1,14:15:38.95:390,39,0	0/0:16,0:16:39.08:0,39,450	1/1:0,6:6:18.04:184,18,0
chr10	70776095	.	TTCTTCCTCC	T	2280.04	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=8.413;DP=645;FS=7.264;HRun=0;HaplotypeScore=171.8957;InbreedingCoeff=0.6410;MQ=57.40;MQ0=8;MQRankSum=-7.324;QD=19.49;ReadPosRankSum=-0.371;VQSLOD=2.4250;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,16:31:66.12:1405,66,0	0/0:4,0:4:12.03:0,12,352	0/0:35,0:12:15.52:0,16,445	0/0:50,0:20:21:0,21,547	0/0:17,0:17:43.32:0,43,1572	0/0:21,0:21:48.16:0,48,1938	0/0:30,0:30:60.20:0,60,2221	0/0:23,0:23:48.14:0,48,1436	0/0:26,0:26:61.41:0,61,2265	0/0:22,0:22:54.52:0,55,2122	0/0:18,0:18:48.16:0,48,2149	0/0:20,0:20:48.15:0,48,1730	0/0:19,0:19:51.16:0,51,2064	0/0:21,0:21:60.21:0,60,2427	0/0:21,0:21:57.18:0,57,2274	0/0:26,0:26:66.23:0,66,2752	0/0:29,0:29:72.20:0,72,2952	0/1:19,0:19:51.88:52,0,1825	0/0:16,0:10:30.09:0,30,1161	0/0:12,0:12:30.09:0,30,1179	0/1:43,0:43:13.85:14,0,3822	0/0:23,0:23:54.15:0,54,2128	0/0:20,0:20:51.12:0,51,1871	0/0:41,0:40:89.44:0,89,3644	0/0:18,0:18:36.11:0,36,1450	1/1:9,8:17:35.32:868,35,0	0/0:15,0:14:42.11:0,42,1440	1/1:6,1:7:3.01:86,3,0
chr10	70778237	.	GT	G	1088.42	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=10.877;DP=645;FS=2.063;HRun=10;HaplotypeScore=87.0368;InbreedingCoeff=0.7956;MQ=74.15;MQ0=3;MQRankSum=-7.164;QD=9.00;ReadPosRankSum=1.799;VQSLOD=2.7584;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,19:26:65.38:465,65,0	0/0:6,0:6:15:0,15,146	0/0:54,1:28:7.27:0,7,202	0/1:42,0:23:30.62:31,0,36	0/0:19,0:20:41.37:0,41,383	0/0:20,1:21:25.11:0,25,436	0/0:27,0:27:69:0,69,690	0/0:16,0:16:36.43:0,36,326	0/0:26,0:26:42.97:0,43,635	0/0:17,0:17:46.10:0,46,432	0/0:18,0:18:32.69:0,33,324	0/0:16,0:16:29.14:0,29,399	0/0:29,0:29:54.87:0,55,640	0/0:26,0:26:49.11:0,49,478	0/0:28,0:29:66.92:0,67,641	0/0:17,0:18:50.92:0,51,513	0/0:43,1:44:87.56:0,88,1132	1/1:20,0:20:48.48:266,48,0	0/0:12,0:12:7.09:0,7,244	0/0:21,0:23:59.90:0,60,581	0/0:9,0:9:21.05:0,21,225	0/0:29,0:30:48.36:0,48,601	0/0:23,0:23:59.48:0,59,606	0/0:14,0:14:42.04:0,42,427	0/0:21,0:21:50.98:0,51,501	1/1:10,18:29:45.30:443,45,0	0/0:24,0:24:51.07:0,51,528	1/1:2,1:2:5.96:43,6,0
chr10	70778246	.	TTG	T	1732.44	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=9.964;DP=646;FS=0.000;HRun=0;HaplotypeScore=96.6265;InbreedingCoeff=0.7605;MQ=71.44;MQ0=5;MQRankSum=-5.734;QD=9.79;ReadPosRankSum=3.321;VQSLOD=3.0795;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:65.91:583,66,0	0/0:6,0:6:18:0,18,236	0/1:58,0:25:3.14:3,0,401	0/1:46,0:22:15.35:15,0,112	0/0:21,0:21:62.26:0,62,770	0/0:21,0:21:39.79:0,40,835	0/0:26,0:26:75.12:0,75,1121	0/0:18,0:18:40:0,40,538	0/0:26,0:26:74.24:0,74,1050	0/0:21,0:21:57.04:0,57,669	0/0:17,0:17:45.02:0,45,581	0/0:17,0:17:50.24:0,50,649	0/0:25,0:25:73.58:0,74,1039	0/0:20,0:20:58.92:0,59,853	0/0:31,0:31:81.77:0,82,1106	0/0:18,0:18:51.15:0,51,836	0/0:43,0:43:99:0,125,1907	1/1:1,19:20:50.20:682,50,0	0/0:13,0:13:16.11:0,16,435	0/0:23,0:23:66.09:0,66,911	0/0:12,0:12:36.02:0,36,475	0/0:30,0:30:71.24:0,71,1100	0/0:22,0:22:59.16:0,59,954	0/0:18,0:18:54.06:0,54,756	0/0:22,0:22:59.75:0,60,850	1/1:25,0:25:50.13:561,50,0	0/0:19,0:19:54.11:0,54,848	1/1:3,0:2:5.98:48,6,0
chr10	70778247	.	TG	T	333.92	PASS	AB=0.906;AC=9;AF=0.161;AN=56;BaseQRankSum=11.421;DP=636;FS=10.199;HRun=10;HaplotypeScore=89.7986;InbreedingCoeff=0.7293;MQ=72.38;MQ0=5;MQRankSum=-4.687;QD=3.34;ReadPosRankSum=3.445;VQSLOD=-0.2865;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:23:33.83:97,34,0	0/0:6,0:6:12.02:0,12,123	0/0:57,1:25:10.61:0,11,239	0/0:47,1:24:10.08:0,10,92	0/0:20,1:21:24.95:0,25,428	0/0:20,0:20:43.12:0,43,486	0/0:26,0:26:57.10:0,57,595	0/0:17,0:17:7:0,7,260	0/0:22,0:22:51.06:0,51,534	0/0:21,0:21:32.38:0,32,309	0/0:17,0:18:32.83:0,33,302	0/0:16,1:17:7.68:0,8,281	0/0:23,2:25:5.42:0,5,475	0/0:20,0:20:47.98:0,48,479	0/1:25,3:29:11.81:12,0,521	0/0:17,0:17:45.10:0,45,482	0/0:41,1:42:77.04:0,77,1031	1/1:20,0:20:46.44:260,46,0	0/0:13,0:13:27.03:0,27,267	0/0:22,0:22:44.29:0,44,448	0/0:12,0:12:32.99:0,33,306	0/0:30,0:30:45.94:0,46,608	0/0:22,0:22:48.04:0,48,515	0/0:17,0:17:42.07:0,42,429	0/0:23,0:23:44.74:0,45,466	1/1:24,0:24:36.81:111,37,0	0/0:19,0:19:42.10:0,42,451	1/1:3,0:2:1.55:4,2,0
chr10	70778256	.	GGC	G	897.26	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.163;DP=580;FS=7.230;HRun=0;HaplotypeScore=94.6876;InbreedingCoeff=0.9272;MQ=70.31;MQ0=4;MQRankSum=-7.346;QD=17.59;ReadPosRankSum=0.756;VQSLOD=3.2903;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,19:25:65.36:473,65,0	0/0:5,0:5:15.04:0,15,248	0/0:54,0:24:35.20:0,35,605	0/0:43,0:22:21.21:0,21,263	0/0:18,0:18:53.94:0,54,870	0/0:19,0:19:48.35:0,48,933	0/0:23,0:23:66.15:0,66,1069	0/0:14,0:14:42.03:0,42,652	0/0:18,0:18:54.13:0,54,929	0/0:15,0:15:33.11:0,33,575	0/0:13,0:13:36.10:0,36,591	0/0:13,0:13:36.01:0,36,562	0/0:21,0:21:50.61:0,51,915	0/0:19,0:19:54.15:0,54,918	0/0:25,0:25:68.95:0,69,1094	0/0:15,0:15:45.14:0,45,798	0/0:41,0:41:99:0,123,2054	0/0:22,0:22:42.27:0,42,188	0/0:14,0:14:39.07:0,39,593	0/0:18,0:18:53.37:0,53,873	0/0:14,0:14:42.06:0,42,646	0/0:28,0:28:72.18:0,72,1207	0/0:22,0:22:63.13:0,63,949	0/0:17,0:17:51.14:0,51,868	0/0:19,0:19:50.87:0,51,857	1/1:4,20:24:71.18:533,71,0	0/0:19,0:19:51.10:0,51,810	1/1:0,1:1:2.99:23,3,0
chr10	70778259	.	AC	A	1032.69	PASS	AB=0.953;AC=7;AF=0.125;AN=56;BaseQRankSum=10.220;DP=560;FS=14.339;HRun=1;HaplotypeScore=82.2087;InbreedingCoeff=0.7733;MQ=71.24;MQ0=3;MQRankSum=-7.670;QD=11.22;ReadPosRankSum=1.382;VQSLOD=0.5859;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:26:60.38:530,60,0	0/0:5,0:5:15.05:0,15,236	0/0:48,1:23:36.15:0,36,615	0/1:38,2:22:14.21:14,0,264	0/0:17,0:17:51.17:0,51,805	0/0:19,0:19:57.19:0,57,907	0/0:22,0:22:66.21:0,66,1028	0/0:14,0:14:42.14:0,42,671	0/0:17,0:17:51.17:0,51,805	0/0:14,0:14:33.10:0,33,503	0/0:13,0:13:36.09:0,36,548	0/0:12,0:12:33.11:0,33,519	0/0:19,0:19:31.39:0,31,809	0/0:19,0:19:54.17:0,54,821	0/0:24,0:24:69.23:0,69,1071	0/0:15,0:15:45.12:0,45,669	0/0:41,0:41:99:0,123,1924	0/0:22,0:22:57.19:0,57,884	0/0:14,0:14:39.13:0,39,623	0/0:18,0:18:54.17:0,54,836	0/0:13,0:13:39.13:0,39,623	0/0:26,0:26:72.15:0,72,1090	0/0:20,0:20:60.16:0,60,879	0/0:17,0:17:51.17:0,51,803	0/0:19,0:19:31.89:0,32,766	1/1:0,23:23:68.54:600,69,0	0/0:19,0:19:48.16:0,48,756	1/1:0,1:1:3:26,3,0
chr10	70778472	.	T	TAA	3160.54	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=0.025;DP=571;FS=0.386;HRun=10;HaplotypeScore=72.4736;InbreedingCoeff=0.9313;MQ=63.78;MQ0=2;MQRankSum=-1.128;QD=17.46;ReadPosRankSum=0.456;VQSLOD=2.1345;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,37:43:95.25:1334,95,0	0/0:10,0:10:24.02:0,24,238	0/0:13,0:10:17.39:0,17,135	0/1:11,0:9:2.33:2,0,77	0/0:20,0:20:57.13:0,57,580	0/0:21,0:22:59.84:0,60,578	0/0:20,0:21:56.83:0,57,547	0/0:34,0:36:53.65:0,54,514	0/0:23,0:23:59.35:0,59,608	0/0:16,0:16:47.17:0,47,430	0/0:19,0:19:45.07:0,45,451	0/0:21,0:21:63.05:0,63,609	1/1:7,0:27:30.58:141,31,0	0/0:21,0:21:51.09:0,51,518	0/0:27,0:27:63.11:0,63,641	0/0:19,0:19:48.05:0,48,477	0/0:20,0:19:39.05:0,39,396	1/1:4,22:27:59.69:858,60,0	0/0:17,0:17:48.10:0,48,488	0/0:16,0:16:33.01:0,33,329	0/0:19,0:19:39.04:0,39,390	0/0:13,0:14:41.81:0,42,398	1/1:3,0:15:20.91:72,21,0	1/1:4,1:28:27.89:180,28,0	0/0:16,0:16:36.05:0,36,366	1/1:5,15:19:17.56:591,18,0	0/0:19,0:19:42.05:0,42,427	1/1:1,8:9:12.04:179,12,0
chr10	70779749	.	GACAC	G	3534.13	PASS	AB=0.793;AC=12;AF=0.214;AN=56;BaseQRankSum=5.841;DP=813;FS=1.477;HRun=0;HaplotypeScore=154.4334;InbreedingCoeff=0.5593;MQ=63.87;MQ0=5;MQRankSum=-0.236;QD=16.67;ReadPosRankSum=3.351;VQSLOD=3.5819;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,30:40:59.89:971,60,0	0/0:15,0:15:27.04:0,27,568	0/0:25,0:15:6.02:0,6,129	0/0:30,0:21:4.56:0,5,45	0/0:15,0:16:32.85:0,33,688	0/0:21,0:24:50.64:0,51,997	0/0:28,0:31:51.62:0,52,940	0/0:20,0:20:26.78:0,27,474	0/0:38,0:39:70.34:0,70,1455	0/0:22,0:22:48.13:0,48,923	0/1:15,0:16:14.50:15,0,608	0/0:41,1:42:34.26:0,34,1614	1/1:8,16:26:48.14:734,48,0	0/0:42,0:43:82.73:0,83,1600	0/0:30,1:32:11.48:0,11,1071	0/0:31,0:32:63.84:0,64,1350	0/0:20,0:23:50.16:0,50,812	0/1:18,0:26:6.77:110,0,7	0/0:13,0:14:18.06:0,18,314	0/0:14,0:24:19.42:0,19,308	0/0:44,0:94:69.21:0,69,1169	0/0:23,0:28:49.14:0,49,1051	1/1:10,12:22:21.07:338,21,0	1/1:19,23:42:47.99:764,48,0	0/0:18,0:19:35.05:0,35,661	0/1:18,11:29:25.03:514,0,25	0/0:7,0:22:15.73:0,16,377	0/1:5,4:9:13.94:88,0,14
chr10	70779863	.	CCA	C	1166.68	PASS	AB=0.909;AC=23;AF=0.442;AN=52;BaseQRankSum=4.009;DP=811;FS=2.479;HRun=0;HaplotypeScore=95.5403;InbreedingCoeff=-0.6357;MQ=49.38;MQ0=69;MQRankSum=0.443;QD=2.03;ReadPosRankSum=2.712;VQSLOD=1.6635;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:36:61.92:0,62,537	0/0:4,0:4:6.02:0,6,82	./.	./.	0/1:7,1:7:23.70:24,0,80	0/1:16,1:17:50.08:50,0,114	0/1:26,1:31:55.77:56,0,290	0/0:18,0:11:12:0,12,148	0/1:23,9:33:99:109,0,201	0/1:32,2:32:55.91:56,0,367	0/0:8,0:8:9.01:0,9,99	0/1:31,2:32:61.76:62,0,356	1/1:11,4:17:26.40:219,26,0	0/1:29,1:30:5.20:5,0,293	0/1:22,4:26:29.61:30,0,409	0/1:23,0:24:17.05:17,0,395	0/1:31,5:36:46.51:47,0,305	0/1:25,2:28:99:111,0,204	0/1:16,0:14:31.83:32,0,99	0/1:18,1:19:11.66:12,0,230	0/1:77,1:75:99:276,0,308	0/1:17,5:21:14.68:15,0,190	0/1:14,1:16:14.70:15,0,159	0/1:35,3:38:73.66:74,0,547	0/1:19,1:21:31.88:32,0,92	0/1:16,1:16:23.32:23,0,53	0/1:15,1:18:31.83:32,0,93	0/1:6,2:8:23.74:24,0,56
chr10	70781020	.	TAC	T	113.13	PASS	AB=0.946;AC=12;AF=0.231;AN=52;BaseQRankSum=1.902;DP=776;FS=0.000;HRun=0;HaplotypeScore=99.7537;InbreedingCoeff=-0.1228;MQ=56.16;MQ0=25;MQRankSum=1.990;QD=0.34;ReadPosRankSum=0.261;VQSLOD=1.7984;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:47:11.57:0,12,132	0/0:11,0:11:14.18:0,14,97	./.	./.	0/1:17,3:20:4.56:26,0,5	0/0:23,0:22:27.01:0,27,283	0/1:31,0:30:8.45:8,0,131	0/0:26,0:26:0.62:0,1,2	1/1:10,9:19:2.90:32,3,0	0/0:30,0:30:10.10:0,10,157	0/0:16,0:16:5.99:0,6,75	0/1:26,1:29:4.49:4,0,270	0/0:18,0:18:14.32:0,14,102	0/1:23,1:22:14.76:15,0,141	0/1:25,3:28:36.49:36,0,212	0/1:24,0:23:1.63:2,0,86	0/1:23,0:22:33.80:34,0,248	0/0:20,0:18:7.92:0,8,64	0/1:22,5:26:52.56:53,0,58	0/0:13,0:16:9.87:0,10,76	0/1:62,0:61:4.43:4,0,291	0/0:30,0:29:18.71:0,19,186	0/0:8,0:14:2.99:0,3,24	0/1:46,1:45:26.99:27,0,115	0/0:22,0:22:14.38:0,14,145	0/0:21,0:21:1.12:0,1,84	0/0:16,0:16:0.58:0,1,195	0/0:11,0:9:10.28:0,10,121
chr10	70791584	.	TACACACACACAC	T	433.49	PASS	AB=0.739;AC=8;AF=0.148;AN=54;BaseQRankSum=5.748;DP=572;FS=0.000;HRun=0;HaplotypeScore=176.0522;InbreedingCoeff=0.3936;MQ=76.66;MQ0=11;MQRankSum=-4.385;QD=4.38;ReadPosRankSum=-1.422;VQSLOD=2.3345;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,11:38:3.89:40,4,0	0/0:8,0:8:8.59:0,9,456	0/0:34,0:29:1.82:0,2,5	./.	0/0:14,0:15:27.09:0,27,1242	0/0:11,0:14:15.05:0,15,717	0/0:30,0:37:33.09:0,33,1320	0/0:29,0:28:18.53:0,19,423	0/0:9,0:10:17.03:0,17,847	0/1:8,1:14:31.23:177,0,31	1/1:8,1:15:2.84:8,3,0	0/0:21,0:21:39.12:0,39,1728	0/0:8,0:15:6.02:0,6,211	0/0:14,0:14:14.31:0,14,602	0/0:15,0:17:21.07:0,21,936	0/0:12,0:12:11.40:0,11,539	0/0:28,0:30:51.18:0,51,2363	0/0:17,0:16:5.84:0,6,652	0/0:14,0:14:3.90:0,4,106	0/0:20,0:21:30.06:0,30,1204	0/0:38,0:39:54.19:0,54,2138	0/0:16,0:16:24.08:0,24,979	0/0:10,0:15:3.01:0,3,94	0/0:16,0:29:9.03:0,9,349	0/0:18,0:20:24.08:0,24,1085	0/1:15,6:21:99:143,0,100	0/0:14,0:14:15.05:0,15,637	1/1:6,4:11:6.02:186,6,0
chr10	70791913	.	GCAGA	G	1582.52	PASS	AB=0.940;AC=13;AF=0.250;AN=52;BaseQRankSum=9.555;DP=687;FS=1.281;HRun=0;HaplotypeScore=106.1252;InbreedingCoeff=0.4621;MQ=69.76;MQ0=8;MQRankSum=0.975;QD=7.99;ReadPosRankSum=1.106;VQSLOD=2.6488;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:74.58:0,75,1553	0/0:16,0:16:21.07:0,21,496	./.	./.	0/0:15,0:15:30.10:0,30,683	1/1:13,11:24:24.08:374,24,0	1/1:16,6:22:12.04:187,12,0	0/0:19,0:18:12.03:0,12,163	1/1:13,16:29:39.13:609,39,0	0/0:23,0:22:45.14:0,45,914	0/1:13,1:14:31.76:32,0,268	0/0:24,0:24:45.15:0,45,1056	0/0:15,0:15:35.31:0,35,732	0/1:21,1:22:7.68:8,0,763	0/0:31,0:31:63.22:0,63,1372	0/0:28,1:29:16.39:0,16,1305	0/0:33,0:33:66.20:0,66,1484	1/1:7,11:18:27.09:421,27,0	0/0:24,0:21:24.08:0,24,499	0/1:20,1:21:7.68:8,0,788	0/0:42,0:42:78.25:0,78,1642	0/0:19,0:19:39.13:0,39,898	0/0:17,0:17:17.90:0,18,308	0/0:26,0:26:47.70:0,48,887	0/1:18,1:19:16.71:17,0,562	0/0:30,0:30:42.14:0,42,930	0/1:26,3:29:95.28:95,0,729	0/0:18,1:19:1.31:0,1,913
chr10	70792423	.	G	GGA	569.09	PASS	AB=0.953;AC=20;AF=0.370;AN=54;BaseQRankSum=-2.228;DP=592;FS=2.075;HRun=0;HaplotypeScore=90.7317;InbreedingCoeff=0.0910;MQ=44.39;MQ0=51;MQRankSum=-0.214;QD=1.80;ReadPosRankSum=-0.345;VQSLOD=1.4106;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:22:6.36:0,6,28	1/1:9,1:10:6.02:88,6,0	./.	0/1:81,0:14:0:0,0,0	0/1:21,0:21:4.40:4,0,27	0/0:18,0:17:5.79:0,6,33	0/1:21,0:19:32.63:33,0,84	1/1:36,0:30:3.48:33,3,0	0/0:14,0:15:14.32:0,14,75	0/1:14,0:17:15.11:15,0,17	0/0:11,0:12:0.47:0,0,1	0/1:15,3:18:20.45:108,0,20	0/1:13,0:13:0.24:0,0,2	0/1:8,0:8:23.43:70,0,23	0/1:12,0:12:26.49:35,0,26	1/1:12,1:13:3:30,3,0	0/0:20,0:21:3.91:0,4,25	0/0:13,0:21:5.63:0,6,28	0/1:11,1:11:2.06:49,0,2	0/0:12,1:12:5.70:0,6,64	0/1:21,5:23:74.91:158,0,75	1/1:13,2:15:3.01:45,3,0	0/0:19,0:17:7.66:0,8,31	0/0:11,0:11:4.88:0,5,20	0/0:8,0:8:3.01:0,3,33	0/0:27,0:26:20.85:0,21,96	1/1:10,0:10:3.01:44,3,0	0/0:18,0:15:16.40:0,16,77
chr10	70792482	.	G	GAC	912.93	PASS	AB=1.000;AC=8;AF=0.148;AN=54;BaseQRankSum=2.768;DP=732;FS=20.906;HRun=0;HaplotypeScore=110.7837;InbreedingCoeff=0.3627;MQ=44.76;MQ0=63;MQRankSum=-1.098;QD=5.53;ReadPosRankSum=-1.671;VQSLOD=1.4990;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:36:56.55:57,0,142	0/0:9,0:9:21.06:0,21,274	./.	0/0:71,0:5:14.94:0,15,182	0/0:26,0:23:49.02:0,49,691	0/0:31,0:30:63.12:0,63,835	0/0:25,0:23:44.87:0,45,569	0/0:46,0:40:97.85:0,98,1163	0/0:20,0:20:46.93:0,47,623	0/0:27,0:25:74.21:0,74,1023	0/0:14,0:14:21.04:0,21,295	0/0:11,0:11:20.56:0,21,301	1/1:4,14:16:4.47:426,4,0	0/0:12,0:11:21:0,21,233	0/0:31,0:31:65.88:0,66,945	0/0:17,0:17:39.08:0,39,550	0/0:22,0:20:50.16:0,50,691	0/1:21,0:21:28.98:29,0,131	0/0:26,0:22:64.99:0,65,804	0/0:22,0:19:41.90:0,42,576	0/0:35,0:31:69.16:0,69,930	0/0:19,0:17:42.99:0,43,571	0/0:5,12:12:0:0,0,0	1/1:6,17:18:17.42:296,17,0	0/0:20,0:20:30:0,30,453	0/1:28,0:26:82.21:82,0,210	0/0:18,0:18:42.61:0,43,638	0/1:32,0:31:99:160,0,155
chr10	70793076	.	TG	T	4265.98	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.463;DP=620;FS=1.270;HRun=1;HaplotypeScore=63.1665;InbreedingCoeff=0.9142;MQ=86.02;MQ0=0;MQRankSum=-2.893;QD=39.50;ReadPosRankSum=1.201;VQSLOD=5.4829;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,65:65:99:2685,193,0	0/0:3,0:3:9.03:0,9,144	0/0:22,0:22:57.12:0,57,851	0/0:18,0:18:37.56:0,38,681	0/0:11,0:11:33.11:0,33,527	0/0:14,0:14:39.13:0,39,624	0/0:26,0:26:75.24:0,75,1171	0/0:23,0:23:60.20:0,60,940	0/0:26,0:26:75.26:0,75,1199	0/0:30,0:30:87.30:0,87,1390	0/0:16,0:16:45.15:0,45,717	0/0:24,0:24:72.25:0,72,1151	0/0:24,0:24:69.24:0,69,1101	0/0:26,0:26:78.27:0,78,1247	0/0:33,0:33:99:0,99,1583	0/0:24,0:24:72.23:0,72,1123	0/0:27,0:27:81.28:0,81,1293	1/1:0,23:23:63.21:872,63,0	0/0:20,0:20:57.19:0,57,902	0/0:16,0:16:48.16:0,48,767	0/0:34,0:34:99:0,99,1583	0/0:20,0:20:54.18:0,54,861	0/0:11,0:11:30.10:0,30,479	0/0:25,0:25:75.26:0,75,1199	0/0:17,0:17:48.16:0,48,768	1/1:1,17:18:4.67:625,5,0	0/0:22,0:22:66.22:0,66,1044	1/1:0,2:2:6.02:84,6,0
chr10	70793318	.	CACACACACACACACAT	C	436.24	PASS	AB=0.919;AC=5;AF=0.100;AN=50;BaseQRankSum=4.219;DP=598;FS=3.053;HRun=0;HaplotypeScore=209.7184;InbreedingCoeff=-0.1038;MQ=48.11;MQ0=37;MQRankSum=-0.880;QD=4.69;ReadPosRankSum=-1.637;VQSLOD=2.7333;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:24:99:182,0,134	0/0:8,0:8:15.05:0,15,381	./.	./.	0/0:11,0:9:17.98:0,18,868	0/0:20,0:20:15.99:0,16,454	0/0:40,0:35:26.69:0,27,656	0/0:19,0:16:26.56:0,27,253	0/0:21,0:21:34.56:0,35,1628	0/1:23,0:19:88.81:89,0,584	./.	0/0:28,0:27:18.79:0,19,996	0/1:12,0:11:40.63:41,0,227	0/0:18,0:17:32.58:0,33,761	0/0:15,0:14:16.47:0,16,321	0/0:15,0:14:21:0,21,737	0/0:32,0:30:34.87:0,35,1771	0/0:23,0:22:48.15:0,48,1428	0/0:21,0:17:19.88:0,20,675	0/0:14,0:13:26.76:0,27,714	0/0:73,0:65:49.90:0,50,2127	0/0:16,0:13:14.99:0,15,476	0/0:17,0:16:12.03:0,12,293	0/0:36,0:34:59.97:0,60,1472	0/0:16,0:16:24.31:0,24,727	0/1:7,15:19:15.74:228,0,16	0/0:20,0:19:44.70:0,45,1117	0/1:9,0:7:9.89:10,0,198
chr10	70793332	.	CAT	C	1033.40	PASS	AB=1.000;AC=20;AF=0.385;AN=52;BaseQRankSum=7.648;DP=566;FS=5.315;HRun=0;HaplotypeScore=98.4254;InbreedingCoeff=0.0068;MQ=47.53;MQ0=47;MQRankSum=-0.468;QD=2.71;ReadPosRankSum=-2.175;VQSLOD=0.8742;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:25:24.97:207,25,0	0/0:5,0:5:2.03:0,2,163	./.	./.	0/1:11,0:9:3.72:4,0,249	0/1:18,0:18:1.68:2,0,147	0/0:37,0:32:21.42:0,21,482	0/0:22,0:13:23.04:0,23,191	0/1:25,0:25:29.36:29,0,435	1/1:23,0:19:13.33:225,13,0	0/0:1,9:10:2.74:0,3,12	0/1:23,0:20:40.48:40,0,297	1/1:10,1:10:6.14:88,6,0	0/0:22,0:21:10.31:0,10,428	0/1:16,0:15:9.49:9,0,133	0/1:14,0:13:29.80:30,0,195	0/1:31,0:29:42.35:42,0,522	0/1:21,0:20:51.95:52,0,365	0/1:20,0:15:20.22:20,0,186	0/0:14,0:13:14.92:0,15,270	0/1:70,0:62:99:135,0,666	0/0:14,0:11:13.92:0,14,220	0/0:14,0:13:11.48:0,11,82	0/1:36,0:35:72.88:73,0,364	0/0:15,0:15:2.04:0,2,220	1/1:22,0:18:19.10:167,19,0	0/0:21,0:20:8.63:0,9,349	0/1:10,0:8:0.41:70,0,0
chr10	70793354	.	T	TAC	256.31	PASS	AB=0.946;AC=9;AF=0.173;AN=52;BaseQRankSum=2.106;DP=531;FS=0.967;HRun=0;HaplotypeScore=96.9211;InbreedingCoeff=0.2419;MQ=46.52;MQ0=49;MQRankSum=-0.617;QD=1.97;ReadPosRankSum=0.573;VQSLOD=2.0285;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:25:11.10:0,11,61	0/0:6,0:6:2.04:0,2,6	./.	0/0:5,0:1:2.50:0,2,9	0/0:15,0:12:2.63:0,3,35	0/0:18,0:18:17.55:0,18,158	0/0:35,0:31:13.95:0,14,155	0/0:15,0:7:9.02:0,9,100	0/0:22,0:22:20.28:0,20,189	0/1:23,0:20:8.50:28,0,9	0/1:9,0:9:17.18:38,0,17	0/1:20,0:18:29.21:116,0,29	1/1:12,0:12:4.96:16,5,0	0/1:12,7:19:0.01:0,0,0	0/1:18,0:17:29.29:29,0,69	0/0:10,0:9:17.78:0,18,176	0/0:29,0:28:31.64:0,32,270	0/0:23,0:22:17.83:0,18,65	0/0:20,0:15:2.59:0,3,7	0/0:8,0:8:5.97:0,6,66	0/0:71,0:62:51.77:0,52,475	0/0:14,0:11:9.01:0,9,92	./.	1/1:29,0:28:17.33:158,17,0	0/0:14,0:14:14.82:0,15,137	0/0:22,0:18:10.05:0,10,78	0/0:16,0:15:13.71:0,14,109	0/0:9,0:7:0.31:0,0,54
chr10	70793515	.	GA	G	590.28	PASS	AB=0.880;AC=12;AF=0.214;AN=56;BaseQRankSum=5.978;DP=453;FS=1.778;HRun=12;HaplotypeScore=57.9570;InbreedingCoeff=0.3935;MQ=78.07;MQ0=0;MQRankSum=-0.545;QD=3.69;ReadPosRankSum=2.201;VQSLOD=-0.2126;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:28:71.33:0,71,659	0/0:3,0:3:3.01:0,3,30	0/1:21,2:19:29.32:29,0,32	0/1:11,0:9:5.69:6,0,22	0/0:19,0:20:41.74:0,42,407	0/0:18,1:19:17.43:0,17,308	0/0:9,0:9:24.04:0,24,237	0/0:25,2:27:21.49:0,21,512	0/0:8,0:8:12.02:0,12,122	0/0:11,0:11:27.93:0,28,271	0/0:12,1:13:12.82:0,13,305	0/0:14,0:14:34.27:0,34,316	1/1:2,7:10:19.94:145,20,0	0/0:12,0:12:30.04:0,30,294	0/0:13,0:13:33.06:0,33,330	0/1:9,1:11:0.03:0,0,215	0/1:34,3:38:1.42:1,0,559	0/0:31,2:34:34.51:0,35,691	0/1:12,3:16:7.53:8,0,276	0/0:14,1:15:13.67:0,14,286	0/0:10,0:10:24.05:0,24,243	0/0:12,0:12:28.29:0,28,272	1/1:5,8:14:23.34:169,23,0	1/1:4,17:23:48.89:359,49,0	0/0:15,0:15:27.43:0,27,244	0/0:16,1:18:19.08:0,19,336	0/0:11,1:12:3.79:0,4,208	0/1:8,2:13:27.33:27,0,177
chr10	70798821	.	TC	T	3877.25	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.462;DP=850;FS=8.280;HRun=4;HaplotypeScore=85.6526;InbreedingCoeff=0.9996;MQ=77.34;MQ0=1;MQRankSum=-2.245;QD=30.53;ReadPosRankSum=3.234;VQSLOD=3.8342;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,171,2225	0/0:12,0:12:36.04:0,36,444	0/0:26,0:23:66.14:0,66,880	0/0:40,0:38:89.46:0,89,1069	0/0:23,0:23:66.07:0,66,800	0/0:32,0:32:93.26:0,93,1231	0/0:35,0:35:99:0,99,1347	0/0:35,0:35:93.28:0,93,1243	0/0:37,0:37:99:0,111,1512	0/0:39,0:39:99:0,102,1346	0/0:17,0:17:48.12:0,48,631	0/0:34,0:34:99:0,99,1354	0/0:20,0:20:60.18:0,60,818	0/0:25,0:25:75.24:0,75,1031	0/0:39,0:39:99:0,105,1399	0/0:27,0:27:75.20:0,75,968	0/0:25,0:25:69.20:0,69,927	0/0:20,0:20:57.14:0,57,756	1/1:0,24:24:69.17:798,69,0	1/1:4,15:19:42.09:488,42,0	1/1:3,51:54:99:1584,132,0	0/0:25,0:25:66.21:0,66,901	0/0:14,0:14:27.07:0,27,352	0/0:41,0:41:99:0,117,1619	0/0:39,0:39:99:0,111,1499	0/0:39,0:39:99:0,108,1373	1/1:1,29:30:84.26:1008,84,0	0/0:15,0:15:39.11:0,39,519
chr10	70799072	.	GTGTGTCTCTCTCTC	G	2403.57	PASS	AB=0.543;AC=7;AF=0.125;AN=56;BaseQRankSum=7.713;DP=714;FS=3.272;HRun=0;HaplotypeScore=257.6496;InbreedingCoeff=0.7159;MQ=56.65;MQ0=22;MQRankSum=-4.263;QD=30.81;ReadPosRankSum=-0.595;VQSLOD=2.6081;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:34:3.48:39,3,0	0/0:8,0:8:24.08:0,24,1089	0/0:35,0:20:50.11:0,50,973	0/0:47,0:24:63.32:0,63,1606	0/0:18,0:18:48.16:0,48,2585	0/0:29,0:28:81.26:0,81,4264	0/0:26,0:24:66.23:0,66,3484	0/0:42,0:41:99:0,107,3827	0/0:13,0:13:37.68:0,38,1774	0/0:48,0:44:99:0,126,6291	0/0:22,0:22:60.21:0,60,2445	0/0:22,0:22:60.04:0,60,2514	0/0:16,0:16:16.72:0,17,707	0/0:20,0:20:51.12:0,51,3357	0/0:22,0:20:57.20:0,57,2946	0/0:15,0:15:42.14:0,42,2550	0/0:35,0:35:90.24:0,90,4722	1/1:4,10:15:19.27:577,19,0	0/0:28,0:28:75.25:0,75,2660	0/0:26,0:25:70.78:0,71,3185	0/0:63,0:62:99:0,157,8099	0/0:29,0:28:72.23:0,72,3900	0/0:19,0:17:8.12:0,8,297	0/0:22,0:21:8.92:0,9,394	0/0:20,0:20:54.62:0,55,2801	0/1:4,20:25:99:1793,0,145	0/0:10,0:10:30.10:0,30,1591	1/1:3,0:3:9.03:127,9,0
chr10	70799076	.	GTC	G	661.29	PASS	AB=0.993;AC=20;AF=0.370;AN=54;BaseQRankSum=2.632;DP=709;FS=3.161;HRun=0;HaplotypeScore=124.4600;InbreedingCoeff=-0.3873;MQ=55.88;MQ0=27;MQRankSum=-2.824;QD=1.40;ReadPosRankSum=-1.165;VQSLOD=2.1698;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:33:0:0,0,0	0/1:10,0:10:22.88:23,0,116	0/0:31,0:17:2.22:0,2,7	0/0:47,0:23:2.60:0,3,46	0/1:18,0:18:14.29:14,0,367	0/1:29,0:28:58.55:59,0,577	0/1:28,0:25:24.76:25,0,546	0/1:39,5:43:69.63:70,0,331	0/1:14,0:14:7.34:7,0,217	0/0:43,0:39:45.40:0,45,747	0/0:22,0:22:23.22:0,23,236	0/1:20,0:20:22.60:23,0,291	1/1:16,0:16:1.12:4,1,0	0/1:20,0:20:18.42:18,0,559	0/1:23,0:21:72.67:73,0,411	0/0:16,0:16:15.41:0,15,419	0/0:30,4:34:19.06:0,19,608	0/1:15,0:15:2.67:26,0,3	0/1:28,0:28:21.99:22,0,226	0/1:25,0:24:24.41:24,0,357	0/1:63,0:62:99:227,0,915	0/1:27,0:26:43.67:44,0,516	0/0:22,0:19:2.90:0,3,25	0/1:23,0:22:0.30:0,0,1	0/0:19,0:19:4.36:0,4,440	0/1:25,0:25:17.74:107,0,18	0/1:10,0:10:34.90:35,0,176	./.
chr10	70799102	.	CGTGT	C	180.89	PASS	AB=0.822;AC=6;AF=0.107;AN=56;BaseQRankSum=1.691;DP=614;FS=21.922;HRun=0;HaplotypeScore=132.9341;InbreedingCoeff=0.5204;MQ=49.98;MQ0=24;MQRankSum=-0.610;QD=1.48;ReadPosRankSum=0.354;VQSLOD=1.3032;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:38:0.05:0,0,1	0/0:7,0:6:11.63:0,12,199	0/0:16,0:5:12.04:0,12,273	0/0:19,0:5:9.03:0,9,173	0/0:19,0:19:18.06:0,18,391	0/0:26,0:25:45.10:0,45,904	0/0:29,0:27:17.09:0,17,604	0/0:35,0:34:32.91:0,33,580	0/0:13,0:13:24.08:0,24,576	0/1:44,0:41:99:146,0,241	0/0:12,0:13:17.22:0,17,99	0/0:21,0:21:38.32:0,38,786	0/0:2,3:6:2.68:0,3,12	0/0:25,0:25:35.56:0,36,655	0/0:20,0:20:35.61:0,36,740	0/0:18,0:19:39.12:0,39,826	0/0:30,0:31:46.53:0,47,870	1/1:11,0:15:12.03:133,12,0	0/0:21,0:21:23.98:0,24,469	0/0:15,0:14:18.06:0,18,400	0/0:58,0:56:79.66:0,80,1477	0/0:24,0:23:32.69:0,33,599	0/1:4,5:8:0.01:0,0,0	0/1:7,7:13:0:0,0,0	0/0:26,0:26:50.61:0,51,1074	0/0:29,0:30:66.13:0,66,1193	0/0:10,0:10:23.27:0,23,334	0/0:5,0:4:8.51:0,9,127
chr10	70801275	.	G	GA	1344.22	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.646;DP=781;FS=1.391;HRun=1;HaplotypeScore=80.4058;InbreedingCoeff=0.9978;MQ=86.17;MQ0=1;MQRankSum=-3.189;QD=37.34;ReadPosRankSum=2.393;VQSLOD=4.2867;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,123,1582	0/0:14,0:14:42.14:0,42,544	0/0:28,0:28:75.23:0,75,939	0/0:26,0:26:61.81:0,62,791	0/0:24,0:24:66.20:0,66,843	0/0:23,0:23:63.19:0,63,804	0/0:36,0:36:99:0,108,1403	0/0:28,0:28:75.24:0,75,973	0/0:29,0:29:87.23:0,87,1096	0/0:17,0:17:51.16:0,51,651	0/0:14,0:14:39.13:0,39,505	0/0:37,0:37:99:0,108,1371	0/0:38,0:38:99:0,114,1465	0/0:35,0:35:99:0,105,1363	0/0:35,0:35:99:0,105,1363	0/0:32,0:32:90.29:0,90,1168	0/0:33,0:33:93.30:0,93,1206	1/1:1,35:36:96.33:1439,96,0	0/0:25,0:25:75.22:0,75,946	0/0:15,0:15:42.12:0,42,530	0/0:52,0:51:99:0,147,1877	0/0:15,0:15:42.13:0,42,543	0/0:24,0:24:60.19:0,60,779	0/0:41,0:41:99:0,114,1480	0/0:26,0:26:78.25:0,78,1013	0/0:16,0:16:48.15:0,48,611	0/0:27,0:27:81.24:0,81,1036	0/0:9,0:8:24.06:0,24,295
chr10	70804221	.	TC	T	981.89	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.043;DP=506;FS=5.006;HRun=3;HaplotypeScore=56.1277;InbreedingCoeff=0.8068;MQ=89.14;MQ0=0;MQRankSum=-0.781;QD=28.88;ReadPosRankSum=2.071;VQSLOD=2.8866;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1661	0/0:2,0:2:3.01:0,3,45	0/0:21,0:21:63.21:0,63,925	0/0:20,0:20:51.16:0,51,698	0/0:11,0:11:30.10:0,30,448	0/0:21,0:21:63.21:0,63,939	0/0:20,0:20:57.19:0,57,852	0/0:29,0:29:87.27:0,87,1248	0/0:18,0:18:54.18:0,54,802	0/0:10,0:10:30.10:0,30,449	0/0:4,0:4:12.04:0,12,180	0/0:16,0:16:48.16:0,48,718	0/0:21,0:21:60.19:0,60,880	0/0:15,0:15:42.13:0,42,606	0/0:24,0:24:69.23:0,69,1032	0/0:15,0:15:45.15:0,45,659	0/0:27,0:27:81.26:0,81,1193	1/1:2,32:34:90.27:1077,90,0	0/0:18,0:18:51.17:0,51,764	0/0:6,0:6:15.05:0,15,225	0/0:42,0:42:99:0,126,1843	0/0:8,0:8:18.06:0,18,268	0/0:7,0:7:21.01:0,21,267	0/0:34,0:34:99:0,102,1524	0/0:14,0:14:42.14:0,42,628	0/0:11,0:11:33.11:0,33,493	0/0:10,0:10:30.10:0,30,449	0/0:8,0:8:24.08:0,24,359
chr10	70804441	.	C	CT	2545.97	PASS	AB=0.733;AC=45;AF=0.833;AN=54;BaseQRankSum=1.011;DP=207;FS=4.536;HRun=0;HaplotypeScore=121.6380;InbreedingCoeff=0.4385;MQ=55.52;MQ0=0;MQRankSum=-0.896;QD=13.33;ReadPosRankSum=4.076;VQSLOD=4.4621;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,9:18:37.44:300,37,0	1/1:0,2:2:6.01:61,6,0	0/0:2,0:1:3.01:0,3,42	0/0:9,0:7:3.97:0,4,61	0/0:2,1:3:2.50:0,2,9	1/1:6,2:8:17.51:151,18,0	1/1:12,2:14:11.87:117,12,0	1/1:5,0:5:8.91:61,9,0	1/1:5,5:10:15.03:154,15,0	1/1:1,0:1:2.97:20,3,0	0/0:1,1:2:3.74:0,4,11	1/1:9,7:16:23.79:229,24,0	1/1:6,8:14:32.43:290,32,0	1/1:8,3:11:17.41:136,17,0	1/1:5,3:8:9.02:90,9,0	1/1:5,7:12:29.53:264,30,0	1/1:7,3:10:9.02:97,9,0	1/1:2,3:5:11.97:117,12,0	1/1:1,2:3:8.98:88,9,0	1/1:3,2:5:4.11:27,4,0	0/1:7,4:11:5.11:48,0,5	1/1:6,3:9:9.98:35,10,0	1/1:1,3:4:0.15:26,0,0	1/1:5,4:9:14.25:130,14,0	1/1:3,2:5:5.61:52,6,0	1/1:3,0:3:5.93:40,6,0	1/1:5,3:8:17.78:135,18,0	./.
chr10	70804444	.	G	GGATT	4851.47	PASS	AB=0.500;AC=41;AF=0.891;AN=46;BaseQRankSum=2.822;DP=100;FS=2.315;HRun=0;HaplotypeScore=113.6453;InbreedingCoeff=0.3704;MQ=73.89;MQ0=0;MQRankSum=-2.529;QD=55.13;ReadPosRankSum=3.454;VQSLOD=6.3115;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:27.09:572,27,0	1/1:0,2:2:6.02:138,6,0	0/0:2,0:1:3.01:0,3,62	0/0:9,0:7:11.16:0,11,120	./.	1/1:2,2:4:12.01:191,12,0	1/1:2,2:4:8.97:113,9,0	./.	1/1:0,5:5:15.05:348,15,0	./.	1/1:0,1:2:3:26,3,0	1/1:0,7:7:21.07:487,21,0	1/1:1,8:9:27.08:568,27,0	1/1:1,3:4:9.03:209,9,0	1/1:0,3:3:9.03:205,9,0	1/1:0,7:7:21.07:481,21,0	1/1:0,3:3:9.03:212,9,0	1/1:0,3:3:9.03:215,9,0	1/1:0,2:2:6.02:144,6,0	1/1:0,2:2:5.91:79,6,0	1/1:0,4:4:0.79:89,1,0	1/1:0,3:4:11.15:78,11,0	0/1:0,3:3:5.46:72,0,5	1/1:1,4:5:12.04:270,12,0	1/1:1,2:3:6.02:132,6,0	./.	1/1:0,3:3:9.03:224,9,0	./.
chr10	70804448	.	G	GTC	3169.99	PASS	AB=0.500;AC=43;AF=0.896;AN=48;BaseQRankSum=4.041;DP=92;FS=0.000;HRun=0;HaplotypeScore=116.7967;InbreedingCoeff=0.2589;MQ=75.22;MQ0=0;MQRankSum=-1.558;QD=39.14;ReadPosRankSum=4.237;VQSLOD=5.6246;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:26.19:368,26,0	1/1:0,2:2:6.02:103,6,0	0/0:3,0:2:2.99:0,3,24	0/0:8,0:6:1.68:0,2,85	1/1:0,1:1:2.04:6,2,0	1/1:0,2:2:6.02:103,6,0	1/1:0,2:2:3.01:50,3,0	./.	1/1:1,4:5:15.05:237,15,0	./.	1/1:0,2:2:2.92:8,3,0	1/1:1,6:7:21.07:328,21,0	1/1:0,8:8:23.44:367,23,0	1/1:0,3:3:9.03:153,9,0	1/1:0,3:3:9.03:153,9,0	1/1:0,7:7:21.07:350,21,0	1/1:0,3:3:9.03:158,9,0	1/1:0,3:3:9.03:159,9,0	1/1:0,2:2:6.02:105,6,0	1/1:0,2:2:5.97:70,6,0	0/1:0,4:4:7.78:51,0,8	1/1:0,4:4:3.18:46,3,0	1/1:0,3:3:3.85:56,4,0	1/1:0,4:4:12.03:169,12,0	1/1:0,2:2:6.02:95,6,0	./.	1/1:0,3:3:9.03:142,9,0	./.
chr10	70804450	.	A	AG	1440.86	PASS	AB=0.700;AC=40;AF=0.833;AN=48;BaseQRankSum=3.769;DP=93;FS=0.000;HRun=0;HaplotypeScore=124.7910;InbreedingCoeff=0.3268;MQ=79.32;MQ0=0;MQRankSum=-1.078;QD=16.56;ReadPosRankSum=4.028;VQSLOD=5.5237;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:20.83:166,21,0	1/1:0,2:2:6:53,6,0	0/0:3,0:2:3:0,3,26	0/1:8,0:7:2.11:2,0,30	0/0:0,1:1:0.47:0,0,1	1/1:0,2:2:6:52,6,0	1/1:0,2:2:2.99:24,3,0	./.	1/1:1,4:5:14.48:110,14,0	./.	0/0:0,2:2:2.03:0,2,5	1/1:1,6:7:20.67:154,21,0	1/1:0,8:8:22.23:180,22,0	1/1:0,3:3:8.98:74,9,0	1/1:0,3:3:8.98:73,9,0	1/1:0,7:7:20.94:170,21,0	1/1:0,3:3:9:79,9,0	1/1:0,3:3:9.01:88,9,0	1/1:0,2:2:6.01:61,6,0	1/1:0,2:2:3.41:19,3,0	0/1:0,4:4:1.51:19,0,2	1/1:0,4:4:5.35:14,5,0	1/1:1,2:3:4.30:40,4,0	1/1:0,4:4:11.51:70,12,0	1/1:0,2:2:5.74:37,6,0	./.	1/1:0,3:3:8.49:61,8,0	./.
chr10	70804452	.	T	TTG	813.42	PASS	AB=0.583;AC=37;AF=0.771;AN=48;BaseQRankSum=4.655;DP=98;FS=0.000;HRun=0;HaplotypeScore=130.5485;InbreedingCoeff=0.2391;MQ=81.63;MQ0=0;MQRankSum=-1.431;QD=9.04;ReadPosRankSum=4.552;VQSLOD=3.2114;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:18.69:91,19,0	1/1:0,2:2:5.78:31,6,0	0/0:4,1:3:5.98:0,6,49	0/1:9,0:9:3.10:3,0,23	0/0:0,1:1:1.55:0,2,4	1/1:0,2:2:5.72:29,6,0	1/1:0,2:2:2.88:15,3,0	./.	1/1:1,4:5:14.23:71,14,0	./.	0/0:1,1:2:0.62:0,1,2	1/1:1,6:7:19.71:95,20,0	1/1:1,8:9:22.70:112,23,0	1/1:0,3:3:8.48:42,8,0	1/1:0,3:3:8.62:45,9,0	1/1:0,7:7:20.04:103,20,0	1/1:0,3:3:8.65:46,9,0	1/1:0,3:3:8.78:52,9,0	1/1:0,2:2:5.88:36,6,0	1/1:1,1:2:2.84:14,3,0	0/1:0,4:4:0.22:11,0,0	0/1:0,4:4:0.28:12,0,0	0/1:0,2:3:5.96:15,0,6	0/1:0,4:4:5.08:32,0,5	1/1:0,2:2:5.62:27,6,0	./.	1/1:0,3:3:8.56:44,9,0	./.
chr10	70804456	.	C	CAA	12212.45	PASS	AB=0.773;AC=54;AF=0.964;AN=56;BaseQRankSum=2.204;DP=335;FS=17.241;HRun=0;HaplotypeScore=322.2343;InbreedingCoeff=-0.0235;MQ=51.19;MQ0=0;MQRankSum=-3.668;QD=36.46;ReadPosRankSum=2.488;VQSLOD=1.8773;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,9:23:56.38:806,56,0	1/1:7,2:9:23.25:324,23,0	0/1:4,3:4:10.60:18,0,11	0/1:9,2:10:19.79:97,0,20	1/1:10,1:11:21:255,21,0	1/1:3,2:5:12.04:182,12,0	1/1:11,2:13:36.12:588,36,0	1/1:20,0:20:45.47:727,45,0	1/1:8,4:13:39.07:563,39,0	1/1:9,0:9:18.06:293,18,0	1/1:7,2:9:23.66:276,24,0	1/1:11,6:18:48.12:715,48,0	1/1:11,8:19:57.01:826,57,0	1/1:8,3:11:30.10:487,30,0	1/1:8,3:11:33.07:501,33,0	1/1:6,7:13:39.13:646,39,0	1/1:7,3:10:30.05:448,30,0	1/1:11,3:14:36.08:546,36,0	1/1:7,2:9:27.09:437,27,0	1/1:8,1:10:29.40:366,29,0	1/1:12,4:16:19.41:354,19,0	1/1:7,4:11:24.73:377,25,0	1/1:8,3:11:29.62:384,30,0	1/1:6,4:10:21.05:288,21,0	1/1:4,2:6:18.06:272,18,0	1/1:15,0:15:42.12:617,42,0	1/1:13,3:16:48.08:680,48,0	1/1:5,0:5:14.96:140,15,0
chr10	70808388	.	TA	T	1034.77	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.720;DP=603;FS=0.000;HRun=10;HaplotypeScore=59.3149;InbreedingCoeff=0.9631;MQ=70.84;MQ0=0;MQRankSum=3.032;QD=17.84;ReadPosRankSum=1.646;VQSLOD=4.2789;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:63.15:0,63,687	0/0:7,0:7:15.03:0,15,159	0/0:19,0:19:26.64:0,27,245	0/0:10,0:9:7.12:0,7,98	0/0:23,0:23:66.12:0,66,696	0/0:31,0:31:78.20:0,78,855	0/0:17,1:18:22.07:0,22,458	0/0:38,0:38:87.23:0,87,955	0/0:16,0:16:42.09:0,42,453	0/0:25,0:25:69.18:0,69,756	0/0:17,0:18:47.94:0,48,502	0/0:31,0:31:84.16:0,84,898	1/1:2,16:18:31.35:397,31,0	0/0:21,0:21:60.09:0,60,619	0/0:27,0:27:75.20:0,75,830	0/0:19,0:19:45.11:0,45,489	0/0:25,0:25:60.14:0,60,648	0/0:28,0:28:69.15:0,69,749	0/0:27,1:28:35.62:0,36,680	0/0:17,0:17:48.11:0,48,517	0/0:16,0:16:39.09:0,39,423	0/0:14,0:14:39.03:0,39,409	1/1:1,14:16:40.98:338,41,0	1/1:4,20:24:50.99:443,51,0	0/0:23,0:23:51.16:0,51,613	0/0:28,0:29:75.19:0,75,814	0/0:23,0:23:60.10:0,60,633	0/0:11,0:11:33.09:0,33,365
chr10	70809668	.	GA	G	2239.99	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.039;DP=382;FS=7.055;HRun=8;HaplotypeScore=46.5385;InbreedingCoeff=0.9437;MQ=80.16;MQ0=3;MQRankSum=1.464;QD=21.33;ReadPosRankSum=3.482;VQSLOD=3.6022;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:87.14:840,87,0	0/0:5,0:5:12.04:0,12,145	0/0:28,1:24:30.91:0,31,403	0/0:31,0:19:35.88:0,36,329	0/0:12,0:12:21.05:0,21,244	0/0:14,0:14:39.12:0,39,471	0/0:9,0:9:24.07:0,24,290	0/0:22,0:22:57.15:0,57,667	0/0:12,0:12:24.07:0,24,290	0/0:21,0:21:52.71:0,53,621	0/0:10,0:10:21.06:0,21,254	0/0:6,0:6:15.05:0,15,181	1/1:3,10:13:32.93:318,33,0	0/0:8,0:8:21.06:0,21,254	0/0:4,0:4:12.04:0,12,143	0/0:5,0:5:12.04:0,12,144	0/0:27,0:27:75.23:0,75,906	1/1:4,23:26:57.09:550,57,0	0/0:15,0:15:42.11:0,42,487	0/0:12,0:12:24.07:0,24,290	0/0:8,0:8:21.06:0,21,254	0/0:3,0:3:9.03:0,9,109	1/1:3,4:7:9.01:87,9,0	1/1:0,4:4:12.02:116,12,0	0/0:13,0:13:33.10:0,33,399	1/1:1,14:15:42.07:405,42,0	0/0:9,0:9:27.07:0,27,315	1/1:0,4:4:12.02:116,12,0
chr10	70811730	.	CT	C	1745.73	PASS	AB=0.887;AC=10;AF=0.179;AN=56;BaseQRankSum=8.690;DP=589;FS=3.059;HRun=12;HaplotypeScore=64.4632;InbreedingCoeff=0.6765;MQ=67.75;MQ0=3;MQRankSum=-0.594;QD=11.34;ReadPosRankSum=2.640;VQSLOD=3.5289;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,32:37:82.72:633,83,0	0/0:6,0:6:15.03:0,15,152	0/1:22,1:16:42.07:42,0,86	0/0:11,0:7:0.67:0,1,48	0/0:32,1:34:40.09:0,40,544	0/0:25,0:25:63.13:0,63,639	0/0:18,0:18:42.07:0,42,420	0/0:23,1:23:33.87:0,34,521	0/0:19,0:19:36.07:0,36,365	0/0:24,0:24:54.08:0,54,536	0/0:11,0:11:30.05:0,30,298	0/0:14,1:15:9.83:0,10,281	0/1:14,3:17:27.59:28,0,283	0/0:17,0:19:41.82:0,42,384	0/0:18,0:18:36.05:0,36,355	0/0:19,0:19:15.83:0,16,323	0/0:22,0:22:54.11:0,54,548	1/1:4,23:27:59.28:464,59,0	0/0:27,2:30:37.24:0,37,530	0/0:22,0:21:39.07:0,39,391	0/0:18,0:17:42.02:0,42,408	0/0:14,0:14:34.30:0,34,333	0/0:13,1:15:5.78:0,6,279	0/0:20,0:21:59.94:0,60,585	0/0:24,0:24:51.05:0,51,494	1/1:6,18:27:26.39:352,26,0	0/0:24,1:26:39.72:0,40,564	1/1:3,19:22:50.80:395,51,0
chr10	70812149	.	A	AT	725.89	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.712;DP=751;FS=4.511;HRun=2;HaplotypeScore=69.5773;InbreedingCoeff=0.8509;MQ=80.76;MQ0=0;MQRankSum=-2.059;QD=34.57;ReadPosRankSum=0.356;VQSLOD=3.9509;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,1703	0/0:14,0:14:42.13:0,42,521	0/0:22,0:22:66.06:0,66,762	0/0:17,0:17:48.07:0,48,538	0/0:29,0:29:84.25:0,84,1024	0/0:26,0:26:78.24:0,78,955	0/0:32,0:32:96.26:0,96,1150	0/0:28,0:27:78.24:0,78,965	0/0:28,0:28:81.25:0,81,1004	0/0:26,0:26:78.24:0,78,957	0/0:21,0:21:63.17:0,63,755	0/0:27,0:27:81.25:0,81,987	0/0:35,0:35:99:0,105,1287	0/0:27,0:27:78.24:0,78,966	0/0:31,0:31:93.27:0,93,1129	0/0:27,0:27:75.22:0,75,917	0/0:39,0:39:99:0,108,1323	1/1:1,20:21:57.19:821,57,0	0/0:25,0:25:69.14:0,69,823	0/0:30,0:30:87.27:0,87,1078	0/0:39,0:39:99:0,108,1321	0/0:26,0:26:69.22:0,69,854	0/0:20,0:20:54.16:0,54,657	0/0:40,0:40:99:0,117,1411	0/0:17,0:17:48.15:0,48,595	0/0:28,0:28:78.24:0,78,967	0/0:25,0:25:75.21:0,75,903	0/0:3,0:3:3.01:0,3,37
chr10	70813524	.	GTGGATGGA	G	854.32	PASS	AB=0.855;AC=4;AF=0.071;AN=56;BaseQRankSum=6.811;DP=996;FS=1.681;HRun=0;HaplotypeScore=222.1265;InbreedingCoeff=0.4139;MQ=48.31;MQ0=34;MQRankSum=-7.469;QD=12.56;ReadPosRankSum=-1.775;VQSLOD=2.5609;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:40:61.80:0,62,2170	0/0:22,0:22:42.21:0,42,1209	0/0:79,0:5:5.05:0,5,93	0/0:83,0:12:5.69:0,6,241	0/0:26,0:26:57.20:0,57,1784	0/0:15,0:15:40.76:0,41,925	0/0:29,0:28:63.22:0,63,2053	0/0:40,0:35:72.10:0,72,1399	0/0:35,0:34:70.45:0,70,2009	0/0:43,0:41:87.25:0,87,2521	0/0:7,0:7:6.49:0,6,240	0/0:37,0:36:75:0,75,2307	0/1:21,7:26:1.81:749,0,2	0/0:42,0:42:46.26:0,46,3447	0/0:35,0:34:78.71:0,79,2413	0/0:34,0:34:78.25:0,78,2319	0/0:30,0:29:69.13:0,69,2077	0/0:38,0:36:69.46:0,69,2052	0/0:35,0:24:51.14:0,51,1202	0/0:20,0:19:39.10:0,39,953	0/0:120,0:113:99:0,212,6634	0/0:21,0:21:36.01:0,36,945	1/1:1,19:19:8.07:137,8,0	0/1:18,2:20:70.05:75,0,70	0/0:25,0:19:27.01:0,27,433	0/0:34,0:32:78.25:0,78,2083	0/0:18,0:18:45.14:0,45,1263	0/0:15,0:15:0.50:0,0,551
chr10	70813608	.	G	GTGGA	1546.88	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=-0.389;DP=998;FS=11.062;HRun=0;HaplotypeScore=168.8045;InbreedingCoeff=0.9542;MQ=47.38;MQ0=79;MQRankSum=-2.114;QD=21.48;ReadPosRankSum=-2.969;VQSLOD=1.8793;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,21:22:18.06:451,18,0	0/0:13,0:12:30.10:0,30,500	0/0:53,0:9:18.05:0,18,278	0/0:50,0:15:36.08:0,36,503	0/0:21,0:19:36.12:0,36,607	0/0:29,0:29:73.49:0,73,1255	0/0:32,0:30:77.98:0,78,1263	0/0:31,0:21:51.15:0,51,814	0/0:33,0:33:72.91:0,73,1278	0/0:54,0:44:99:0,107,1792	0/0:17,0:16:36.12:0,36,608	0/0:49,0:47:99:0,108,1824	0/0:31,0:36:16.56:0,17,812	0/0:35,0:34:96.29:0,96,1570	0/0:49,0:48:99:0,120,2031	0/0:27,0:26:59.98:0,60,984	0/0:40,0:40:93.32:0,93,1556	0/0:34,0:34:81.27:0,81,1294	0/0:36,0:19:51.16:0,51,827	0/0:25,0:22:51.16:0,51,836	0/0:120,0:105:99:0,231,3833	0/0:34,0:32:49.40:0,49,841	0/0:22,0:20:8.82:0,9,362	0/0:31,0:31:23.43:0,23,384	0/0:28,0:25:63.22:0,63,1074	1/1:17,18:28:54.15:1215,54,0	0/0:15,0:14:33.07:0,33,548	./.
chr10	70813696	.	A	AGGAT	4766.37	PASS	AB=0.958;AC=15;AF=0.268;AN=56;BaseQRankSum=-5.411;DP=862;FS=8.985;HRun=0;HaplotypeScore=166.2204;InbreedingCoeff=0.8784;MQ=54.78;MQ0=8;MQRankSum=2.556;QD=21.67;ReadPosRankSum=0.814;VQSLOD=4.0333;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,2:27:5.82:404,6,0	0/0:10,0:10:15.05:0,15,239	0/0:31,0:21:26.76:0,27,495	0/0:32,0:18:25.90:0,26,389	0/1:22,0:23:5.35:5,0,362	0/0:19,0:18:39.12:0,39,603	0/0:37,0:37:55.03:0,55,916	0/0:32,0:32:54.58:0,55,794	0/0:29,0:29:57.19:0,57,938	0/0:43,0:39:48.16:0,48,768	0/0:12,0:12:24.08:0,24,365	0/0:50,0:50:99:0,99,1598	1/1:6,26:33:37.44:931,37,0	0/0:34,0:34:34.34:0,34,889	0/0:25,0:24:45.15:0,45,739	0/0:35,0:35:72.25:0,72,1180	0/0:39,0:39:90.31:0,90,1449	1/1:18,25:44:48.39:1312,48,0	0/0:23,0:20:24.08:0,24,390	0/0:14,0:14:19.31:0,19,295	0/0:105,0:103:99:0,195,3139	0/0:18,0:16:15.05:0,15,233	1/1:15,4:19:18.06:388,18,0	1/1:10,31:42:52.06:1246,52,0	0/0:32,0:31:24.07:0,24,372	1/1:23,2:22:18.06:382,18,0	0/0:18,0:18:35.32:0,35,524	1/1:2,0:2:6.01:98,6,0
chr10	70813719	.	G	GTGGA	1740.57	PASS	AB=0.724;AC=5;AF=0.089;AN=56;BaseQRankSum=3.824;DP=876;FS=7.667;HRun=0;HaplotypeScore=165.3825;InbreedingCoeff=0.6099;MQ=51.75;MQ0=26;MQRankSum=-4.302;QD=29.50;ReadPosRankSum=-1.530;VQSLOD=2.8425;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,4:27:48.16:1085,48,0	0/0:9,0:9:12.04:0,12,201	0/0:33,0:18:18.06:0,18,272	0/0:34,0:18:4.07:0,4,333	0/0:24,0:24:42.14:0,42,701	0/0:24,0:23:39.60:0,40,653	0/0:31,0:31:72.23:0,72,1165	0/0:40,0:37:81.11:0,81,1221	0/0:28,0:28:66.22:0,66,1069	0/0:47,0:40:81.28:0,81,1352	0/0:17,0:16:30.10:0,30,492	0/0:42,0:42:93.16:0,93,1541	0/0:35,0:34:16.74:0,17,346	0/0:33,0:33:81.28:0,81,1338	0/0:28,0:26:45.14:0,45,713	0/0:33,0:33:78.27:0,78,1293	0/0:40,0:40:49.39:0,49,1369	0/0:31,0:31:2.74:0,3,576	0/0:32,0:17:27.08:0,27,419	0/0:18,0:18:36.12:0,36,577	0/0:96,0:93:99:0,196,3162	0/0:19,0:17:32.69:0,33,490	0/0:17,0:14:25.80:0,26,378	0/0:47,0:47:52.50:0,52,861	0/0:37,0:36:63.17:0,63,1006	0/1:13,7:17:20.08:560,0,20	0/0:18,0:18:39.13:0,39,634	1/1:5,0:5:5.49:215,5,0
chr10	70813972	.	G	GATGTGTAGATACACGTAT	1529.79	PASS	AB=0.679;AC=18;AF=0.900;AN=20;BaseQRankSum=-2.717;DP=47;FS=16.767;HRun=0;HaplotypeScore=33.4351;InbreedingCoeff=-0.1545;MQ=124.21;MQ0=1;MQRankSum=-1.014;QD=43.71;ReadPosRankSum=1.176;VQSLOD=0.5245;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:5,0:9:57.53:669,0,58	0/1:4,1:8:51.31:264,0,51	./.	./.	1/1:2,0:3:5.98:76,6,0	./.	1/1:1,0:1:3.01:49,3,0	./.	./.	1/1:1,0:1:3:25,3,0	./.	1/1:2,0:2:3.01:46,3,0	./.	./.	1/1:0,0:1:0.89:2,1,0	./.	1/1:3,0:3:3.01:43,3,0	./.	1/1:5,0:5:9.03:334,9,0	./.	./.	./.	./.	./.	./.	1/1:2,0:2:6:105,6,0
chr10	70815209	.	TC	T	1007.92	PASS	AB=0.880;AC=19;AF=0.339;AN=56;BaseQRankSum=7.445;DP=485;FS=7.071;HRun=11;HaplotypeScore=67.0720;InbreedingCoeff=0.2579;MQ=75.06;MQ0=1;MQRankSum=0.823;QD=3.94;ReadPosRankSum=0.956;VQSLOD=0.3199;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,20:26:37.93:295,38,0	0/1:3,1:4:18.59:19,0,26	0/1:26,0:22:42.57:43,0,45	0/1:16,0:16:11.23:11,0,76	0/0:6,0:6:12.03:0,12,127	0/1:10,2:12:22.40:22,0,172	0/1:26,8:34:93.35:93,0,425	0/0:22,1:24:3.65:0,4,186	0/0:19,0:19:33.06:0,33,337	0/0:9,0:9:15.02:0,15,145	0/0:5,0:5:9.02:0,9,96	0/0:25,1:27:26.27:0,26,456	1/1:6,0:24:36.65:106,37,0	0/0:16,0:16:38.96:0,39,367	0/0:17,1:18:11.43:0,11,300	0/0:27,1:29:44.30:0,44,632	0/0:13,0:13:18:0,18,180	0/0:12,0:12:6.12:0,6,247	0/1:10,2:12:28.03:28,0,113	0/1:12,4:16:71.49:71,0,132	0/0:31,1:31:10.90:0,11,502	0/1:13,1:14:0.55:1,0,194	1/1:2,0:15:28.52:83,29,0	1/1:2,0:24:42.78:124,43,0	0/0:13,0:13:33.06:0,33,332	1/1:4,10:14:32.91:264,33,0	0/1:16,3:19:31.76:32,0,295	0/0:6,0:6:8.99:0,9,74
chr10	70822730	.	A	AT	3844.66	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=-8.877;DP=664;FS=0.000;HRun=9;HaplotypeScore=67.0255;InbreedingCoeff=0.8426;MQ=76.78;MQ0=0;MQRankSum=-1.927;QD=19.32;ReadPosRankSum=0.272;VQSLOD=3.7738;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,46:57:99:1342,123,0	0/0:12,0:12:26.95:0,27,228	0/1:18,0:18:9.20:9,0,216	0/0:11,0:11:7.76:0,8,119	0/0:20,1:21:29.81:0,30,488	0/0:22,0:22:53.99:0,54,469	0/0:19,0:19:53.98:0,54,469	0/0:15,0:15:29.97:0,30,260	0/0:32,0:32:83.93:0,84,722	0/0:24,0:25:25.91:0,26,442	0/0:21,0:21:53.97:0,54,468	0/0:32,0:32:89.97:0,90,779	1/1:2,14:16:36.10:398,36,0	0/0:32,0:32:80.09:0,80,697	0/0:22,0:22:50.96:0,51,443	0/0:26,0:26:65.96:0,66,569	0/0:38,0:38:98.94:0,99,855	1/1:3,1:18:42.91:238,43,0	0/1:15,0:15:3.12:3,0,204	0/0:25,0:25:68.96:0,69,594	0/0:31,0:31:74.96:0,75,651	0/0:29,0:29:74.94:0,75,647	1/1:2,14:16:31.22:335,31,0	1/1:2,21:23:60.16:663,60,0	0/0:27,0:27:68.91:0,69,589	1/1:8,22:30:46.10:724,46,0	0/0:24,1:25:38.81:0,39,566	1/1:2,4:6:12.03:133,12,0
chr10	70823309	.	GACGC	G	304.20	PASS	AB=0.928;AC=5;AF=0.104;AN=48;BaseQRankSum=2.943;DP=556;FS=2.603;HRun=0;HaplotypeScore=102.5808;InbreedingCoeff=0.1769;MQ=62.39;MQ0=19;MQRankSum=-0.773;QD=4.91;ReadPosRankSum=-0.973;VQSLOD=2.1283;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:24:3:0,3,25	./.	0/0:34,0:16:2.22:0,2,7	0/0:32,0:18:3.01:0,3,48	0/0:8,0:8:12.04:0,12,260	0/0:15,0:14:16.28:0,16,312	0/0:48,0:48:20.58:0,21,1357	./.	0/0:15,0:15:12.04:0,12,263	0/1:18,4:22:19.22:231,0,19	1/1:3,3:6:9.03:146,9,0	0/0:33,0:33:10.29:0,10,1147	0/0:11,0:11:3.59:0,4,23	0/0:17,0:17:36.11:0,36,790	0/0:11,0:11:15.05:0,15,363	0/0:11,0:11:12.04:0,12,286	0/0:29,0:29:45.13:0,45,989	0/0:32,0:31:55.70:0,56,1064	0/0:16,0:10:2.97:0,3,10	0/0:5,0:5:2.92:0,3,17	0/0:60,0:51:75.14:0,75,1497	0/0:14,0:14:9.03:0,9,213	./.	0/0:49,0:48:18.33:0,18,133	0/1:19,0:19:0.86:1,0,437	0/1:12,1:11:30.59:31,0,192	0/0:11,0:11:21.03:0,21,445	./.
chr10	70823322	.	ACG	A	50.98	PASS	AB=0.907;AC=5;AF=0.089;AN=56;BaseQRankSum=6.008;DP=517;FS=4.740;HRun=0;HaplotypeScore=79.1912;InbreedingCoeff=-0.1255;MQ=50.85;MQ0=22;MQRankSum=-1.654;QD=0.98;ReadPosRankSum=0.015;VQSLOD=1.2625;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:15.03:0,15,209	0/1:3,3:6:22.92:23,0,114	0/0:30,0:8:21.80:0,22,251	0/0:26,0:7:18.06:0,18,258	0/0:9,0:9:21.06:0,21,341	0/1:16,0:15:25.75:26,0,436	0/0:37,0:37:98.69:0,99,1756	0/0:5,0:3:9.01:0,9,97	0/0:15,0:15:32.90:0,33,537	0/0:27,0:26:7.55:0,8,369	0/1:4,0:4:7.87:8,0,34	0/0:32,0:32:75.67:0,76,1368	0/0:9,0:9:2.79:0,3,202	0/0:16,0:16:43.68:0,44,762	0/0:10,0:10:27.09:0,27,453	0/0:9,0:9:24.55:0,25,402	0/0:29,0:29:78.24:0,78,1327	0/0:30,1:28:75.24:0,75,1303	0/0:13,0:7:15.05:0,15,199	0/1:6,0:6:25.24:25,0,73	0/0:66,0:52:99:0,129,2185	0/0:8,0:8:15.05:0,15,259	0/0:1,0:1:3.01:0,3,43	0/0:48,0:47:38.95:0,39,622	0/0:16,0:16:35.77:0,36,584	0/1:17,3:16:81.99:82,0,247	0/0:8,0:8:24.08:0,24,442	0/0:2,0:1:3.01:0,3,38
chr10	70823341	.	CGCAT	C	48.63	PASS	AB=0.976;AC=8;AF=0.148;AN=54;BaseQRankSum=4.426;DP=439;FS=11.626;HRun=0;HaplotypeScore=78.6121;InbreedingCoeff=0.0314;MQ=47.61;MQ0=16;MQRankSum=-4.094;QD=0.39;ReadPosRankSum=0.036;VQSLOD=0.5294;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:8:0:0,0,0	0/0:2,0:2:6.02:0,6,134	0/0:18,0:3:2.21:0,2,66	0/0:27,0:4:4.93:0,5,86	0/0:7,0:7:15.01:0,15,205	0/0:12,0:11:3.07:0,3,426	0/0:34,0:34:90.24:0,90,1900	0/0:5,0:5:15.04:0,15,300	0/1:7,1:8:12.86:13,0,304	0/1:29,1:26:33.27:33,0,281	0/0:3,0:3:8.97:0,9,71	0/0:26,0:26:32.31:0,32,1055	0/1:10,0:10:19.49:40,0,19	0/0:15,0:15:37.07:0,37,888	0/0:5,0:5:15.04:0,15,320	0/0:7,0:7:15.02:0,15,227	0/0:30,0:30:81.63:0,82,1552	0/1:30,0:26:30.48:30,0,390	0/1:5,0:3:7.98:8,0,66	0/0:1,0:1:3.01:0,3,72	0/0:74,0:64:99:0,126,2916	0/0:6,0:6:9.03:0,9,207	./.	1/1:30,3:32:3.90:43,4,0	0/0:10,0:10:21.02:0,21,356	0/0:20,0:18:3.45:0,3,112	0/0:8,0:8:20.99:0,21,460	0/0:1,0:1:2.99:0,3,23
chr10	70823366	.	GCA	G	146.39	PASS	AB=0.931;AC=4;AF=0.080;AN=50;BaseQRankSum=5.594;DP=431;FS=0.000;HRun=0;HaplotypeScore=62.7651;InbreedingCoeff=0.1922;MQ=45.39;MQ0=21;MQRankSum=-5.669;QD=2.40;ReadPosRankSum=0.412;VQSLOD=1.5105;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:3,0:3:9.03:0,9,137	0/0:15,1:2:2.68:0,3,11	0/0:24,0:5:3.01:0,3,50	0/0:2,0:2:3.01:0,3,42	0/0:10,0:9:15.03:0,15,228	0/0:26,0:26:66.23:0,66,1100	0/0:6,0:6:15.02:0,15,203	0/0:8,0:7:12.92:0,13,199	0/1:28,1:23:33.79:34,0,173	0/0:4,0:4:3.01:0,3,45	0/0:16,0:16:30.05:0,30,411	1/1:12,3:15:12.43:143,12,0	0/0:14,0:14:33.11:0,33,542	0/0:4,0:4:9.03:0,9,138	0/0:5,0:5:9.02:0,9,127	0/0:26,0:26:60.20:0,60,998	0/0:25,0:23:53.82:0,54,768	0/0:8,0:7:20.96:0,21,281	0/0:2,0:2:3.01:0,3,45	0/0:105,0:95:99:0,203,3112	0/0:4,0:3:9.01:0,9,120	./.	./.	0/0:11,0:11:18.06:0,18,306	0/1:15,2:14:76.72:77,0,116	0/0:6,0:6:12.02:0,12,167	0/0:3,0:3:3.90:0,4,40
chr10	70823368	.	A	ACG	79.56	PASS	AB=1.000;AC=3;AF=0.058;AN=52;BaseQRankSum=5.572;DP=438;FS=0.000;HRun=0;HaplotypeScore=67.2676;InbreedingCoeff=0.2976;MQ=44.96;MQ0=23;MQRankSum=-5.477;QD=2.57;ReadPosRankSum=1.789;VQSLOD=1.5133;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:3,0:3:9.03:0,9,135	0/0:17,0:2:2.68:0,3,11	0/0:29,0:6:8.75:0,9,77	0/0:2,0:2:5.61:0,6,54	0/0:10,0:9:20.92:0,21,257	0/0:25,0:25:75.18:0,75,1076	0/0:6,0:6:17.98:0,18,223	0/0:8,0:7:11.71:0,12,184	0/0:28,0:22:26.72:0,27,286	0/0:4,0:4:3.01:0,3,46	0/0:16,0:16:39:0,39,479	1/1:14,1:15:11.88:100,12,0	0/0:14,0:14:33.11:0,33,505	0/0:4,0:4:12.03:0,12,161	0/0:5,0:5:11.99:0,12,137	0/0:26,0:26:69.15:0,69,982	0/0:26,0:23:41.47:0,41,726	0/0:8,0:7:20.99:0,21,289	0/0:2,0:2:3.01:0,3,46	0/0:108,0:97:99:0,208,2926	0/0:4,0:3:9:0,9,113	./.	0/0:31,1:30:5.67:0,6,46	0/0:10,0:10:21.06:0,21,300	0/1:16,0:14:77.22:77,0,163	0/0:6,0:6:18.01:0,18,206	0/0:3,0:3:3.88:0,4,32
chr10	70823376	.	ACG	A	73.05	PASS	AB=0.974;AC=4;AF=0.077;AN=52;BaseQRankSum=5.436;DP=459;FS=0.000;HRun=0;HaplotypeScore=64.4661;InbreedingCoeff=0.1964;MQ=43.54;MQ0=27;MQRankSum=-5.371;QD=1.83;ReadPosRankSum=-0.868;VQSLOD=1.3066;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:3,0:3:9.01:0,9,112	0/0:30,0:3:4.41:0,4,15	0/0:37,0:6:4.47:0,4,63	0/0:1,0:1:2.99:0,3,24	0/0:7,0:6:15.05:0,15,269	0/0:24,0:24:72.10:0,72,1270	0/1:8,0:8:0.19:0,0,186	0/0:8,0:7:14.15:0,14,214	0/0:25,1:20:0.81:0,1,177	0/0:4,0:4:3.01:0,3,38	0/0:14,0:14:27.07:0,27,381	1/1:14,0:14:4.95:110,5,0	0/0:15,0:15:36.08:0,36,592	0/0:3,0:3:9.02:0,9,121	0/0:3,0:3:8.99:0,9,136	0/0:27,0:27:70.02:0,70,1185	0/0:28,0:25:49.31:0,49,790	0/0:10,0:9:19.28:0,19,264	0/0:3,0:3:5.98:0,6,57	0/0:111,1:100:99:0,202,3409	0/0:4,0:3:6.02:0,6,95	./.	0/0:30,1:29:0.89:0,1,2	0/0:11,0:11:21.04:0,21,367	0/1:17,1:16:53.52:54,0,98	0/0:4,0:4:9.01:0,9,139	0/0:3,0:3:8.77:0,9,54
chr10	70823386	.	GCA	G	123.77	PASS	AB=0.933;AC=7;AF=0.152;AN=46;BaseQRankSum=5.982;DP=460;FS=0.000;HRun=0;HaplotypeScore=59.0201;InbreedingCoeff=0.2140;MQ=42.41;MQ0=30;MQRankSum=-3.688;QD=1.49;ReadPosRankSum=-0.120;VQSLOD=1.2607;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:2,0:2:6.02:0,6,94	0/0:38,0:4:9:0,9,111	0/0:50,0:5:9.03:0,9,130	0/0:3,0:3:9.03:0,9,133	0/0:10,0:9:24.05:0,24,343	0/0:23,1:24:22.32:0,22,872	0/0:9,0:8:12.04:0,12,189	0/0:5,0:4:9.03:0,9,149	0/1:21,3:18:39.59:58,0,40	./.	0/0:8,0:8:9.03:0,9,149	1/1:10,0:11:3.97:33,4,0	0/0:11,0:11:18.06:0,18,299	0/0:2,0:2:6.02:0,6,100	0/0:3,0:3:9.03:0,9,150	0/0:27,1:28:37.49:0,37,1140	0/1:27,1:26:35.22:35,0,589	0/0:8,0:5:12.04:0,12,190	0/0:3,0:3:6.02:0,6,94	0/0:108,1:101:99:0,127,2904	./.	./.	./.	0/0:12,0:12:27.09:0,27,437	0/1:16,0:16:87.01:87,0,111	0/0:3,0:3:9.03:0,9,138	1/1:3,0:3:2.99:27,3,0
chr10	70823399	.	CAT	C	170.33	PASS	AB=0.965;AC=10;AF=0.208;AN=48;BaseQRankSum=7.050;DP=477;FS=0.000;HRun=0;HaplotypeScore=66.1639;InbreedingCoeff=0.0382;MQ=42.35;MQ0=30;MQRankSum=-5.127;QD=1.01;ReadPosRankSum=-0.554;VQSLOD=1.0812;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:2,0:2:6.02:0,6,121	0/0:43,0:3:9.03:0,9,113	0/1:60,0:7:7.47:7,0,140	0/0:6,0:6:15.03:0,15,255	0/0:12,0:11:30.07:0,30,512	0/0:26,0:26:62.53:0,63,1218	0/1:8,0:7:1.93:2,0,231	0/0:5,0:5:15.05:0,15,275	0/1:12,0:9:44.67:47,0,45	./.	0/0:7,0:7:15.01:0,15,229	0/1:11,1:12:23.47:42,0,23	0/0:9,0:9:21.06:0,21,389	0/0:2,0:2:6.02:0,6,120	0/0:4,0:4:12.03:0,12,206	0/0:31,0:31:65.90:0,66,1503	0/1:32,0:29:12.28:12,0,744	0/0:10,0:4:12.04:0,12,233	0/0:3,0:3:6.02:0,6,121	0/0:110,1:104:99:0,158,3710	./.	./.	1/1:23,4:25:0.47:1,0,0	0/0:17,0:17:22.30:0,22,603	0/1:11,2:12:94.77:136,0,95	0/0:3,0:3:9.01:0,9,143	1/1:3,1:4:2.54:41,3,0
chr10	70823400	.	ATG	A	154.69	PASS	AB=0.960;AC=8;AF=0.167;AN=48;BaseQRankSum=5.891;DP=480;FS=3.288;HRun=0;HaplotypeScore=65.7453;InbreedingCoeff=0.0103;MQ=42.44;MQ0=30;MQRankSum=-5.315;QD=1.13;ReadPosRankSum=-1.412;VQSLOD=1.1228;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:2,0:2:6.02:0,6,122	0/0:45,0:4:11.77:0,12,135	0/1:61,1:7:36.41:36,0,152	0/0:6,0:6:15.05:0,15,292	0/0:12,0:11:30.10:0,30,584	0/0:29,0:29:84.45:0,84,1445	0/1:7,1:7:24.02:24,0,199	0/0:5,0:5:15.05:0,15,268	0/1:12,0:9:24.40:24,0,69	./.	0/0:8,0:8:18.04:0,18,296	0/1:12,0:12:34.24:34,0,52	0/0:7,1:8:21.07:0,21,412	0/0:2,0:2:6.02:0,6,116	0/0:4,0:4:12.04:0,12,232	0/0:31,0:31:84.84:0,85,1606	0/0:27,4:28:0.37:0,0,766	0/0:10,0:4:12.04:0,12,221	0/0:3,0:3:6.02:0,6,122	0/0:107,2:103:99:0,162,3951	./.	./.	0/1:26,1:25:0:0,0,1	0/0:16,1:17:4.49:0,4,658	0/1:11,1:11:54.43:107,0,54	0/0:3,0:3:9.03:0,9,164	1/1:4,0:4:2.54:47,3,0
chr10	70823410	.	GCA	G	174.94	PASS	AB=0.932;AC=9;AF=0.180;AN=50;BaseQRankSum=5.159;DP=498;FS=1.931;HRun=0;HaplotypeScore=66.2084;InbreedingCoeff=0.0397;MQ=43.81;MQ0=27;MQRankSum=-2.222;QD=0.93;ReadPosRankSum=0.147;VQSLOD=1.4275;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:4:12.03:0,12,162	0/0:54,0:6:4.25:0,4,52	0/0:65,0:6:7.96:0,8,99	0/0:6,0:6:15.05:0,15,248	0/0:14,0:13:27.09:0,27,435	0/0:25,0:25:51.63:0,52,812	0/1:7,0:5:26.77:27,0,69	0/1:7,1:8:22.40:22,0,170	0/1:9,0:8:23.58:31,0,24	./.	0/0:10,0:10:23.92:0,24,344	0/0:10,0:10:9.02:0,9,113	0/0:10,0:10:1.13:0,1,245	0/0:1,0:1:3.01:0,3,50	0/0:4,0:4:9.03:0,9,149	0/0:32,0:32:66.22:0,66,1066	0/0:30,1:28:33.36:0,33,530	0/0:11,0:4:12.03:0,12,168	0/0:3,0:3:6.02:0,6,99	0/1:101,12:107:56.81:57,0,2684	0/0:2,0:1:3.01:0,3,43	./.	1/1:26,0:24:3:27,3,0	0/0:14,0:14:26.14:0,26,444	0/1:12,1:12:0.41:106,0,0	0/1:3,1:4:28.43:28,0,85	0/1:8,0:8:1.79:3,0,2
chr10	70823424	.	ACG	A	128.16	PASS	AB=0.990;AC=10;AF=0.200;AN=50;BaseQRankSum=7.861;DP=474;FS=10.077;HRun=0;HaplotypeScore=67.1802;InbreedingCoeff=0.3505;MQ=46.97;MQ0=21;MQRankSum=-3.655;QD=1.15;ReadPosRankSum=-0.696;VQSLOD=0.3060;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:4:12.04:0,12,195	0/1:47,2:4:2.92:3,0,52	0/0:50,0:7:13.83:0,14,178	0/0:7,0:7:20.24:0,20,316	0/0:18,0:18:38.66:0,39,580	0/0:24,0:24:67.92:0,68,1060	0/1:10,0:8:8.18:8,0,100	0/0:8,0:8:1.48:0,1,255	0/1:10,0:9:22.63:40,0,23	./.	0/0:17,0:17:41.89:0,42,578	0/0:8,0:8:7.98:0,8,102	0/0:11,0:11:26.91:0,27,364	0/0:5,0:5:14.93:0,15,145	0/0:4,0:4:12:0,12,193	0/0:26,0:26:66.09:0,66,1216	0/0:29,1:27:29.65:0,30,563	0/0:11,0:6:12.04:0,12,219	0/0:3,0:3:6.02:0,6,115	0/0:105,0:99:99:0,126,3347	0/0:2,0:2:5.99:0,6,78	./.	1/1:20,0:18:2.33:8,2,0	0/0:15,0:15:38.75:0,39,594	1/1:9,1:9:20.01:161,20,0	0/1:4,0:4:6.57:7,0,120	1/1:8,0:8:5.47:32,5,0
chr10	70823428	.	ACG	A	59.05	PASS	AB=0.993;AC=7;AF=0.135;AN=52;BaseQRankSum=6.907;DP=463;FS=9.092;HRun=0;HaplotypeScore=64.3493;InbreedingCoeff=0.3339;MQ=48.06;MQ0=20;MQRankSum=-6.047;QD=0.63;ReadPosRankSum=-1.740;VQSLOD=-0.2133;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:5,0:5:12.04:0,12,212	0/1:45,0:4:3.11:3,0,52	0/0:45,1:7:15.05:0,15,262	0/0:8,0:8:24.08:0,24,431	0/0:17,0:17:36.01:0,36,622	0/0:24,0:24:70.50:0,71,1249	0/0:9,0:7:17.09:0,17,248	0/0:8,0:8:21.03:0,21,333	0/1:11,0:10:64.55:65,0,69	0/0:3,0:3:3.01:0,3,40	0/0:17,0:17:42.99:0,43,748	0/0:7,0:7:5.41:0,5,66	0/0:15,0:15:42.07:0,42,621	0/0:5,0:5:15.05:0,15,283	0/0:4,0:4:12.04:0,12,221	0/0:26,0:26:69.19:0,69,1239	0/0:26,0:23:27.36:0,27,568	0/0:13,0:8:24.07:0,24,356	0/0:3,0:3:9.03:0,9,156	0/0:103,0:97:99:0,240,4115	0/0:2,0:2:6.02:0,6,115	./.	1/1:16,2:16:2.03:6,2,0	0/0:15,0:15:39.12:0,39,690	1/1:9,1:9:2.63:67,3,0	0/0:4,0:4:12.03:0,12,196	0/1:8,0:8:2.48:26,0,2
chr10	70823431	.	CACAG	C	324.51	PASS	AB=0.964;AC=9;AF=0.173;AN=52;BaseQRankSum=7.218;DP=462;FS=4.721;HRun=0;HaplotypeScore=76.4846;InbreedingCoeff=0.4316;MQ=48.55;MQ0=17;MQRankSum=-7.050;QD=4.06;ReadPosRankSum=-0.035;VQSLOD=1.4617;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:4:12.04:0,12,295	0/0:43,0:4:6.27:0,6,75	0/0:43,0:8:18.06:0,18,276	0/0:8,0:8:24.08:0,24,588	0/0:17,0:17:33.11:0,33,803	0/0:25,0:25:69.21:0,69,1601	0/0:8,0:6:12.04:0,12,249	0/0:9,0:8:21.06:0,21,476	0/1:13,0:11:12.32:12,0,24	0/0:3,0:3:3.01:0,3,50	0/0:17,1:18:21.25:0,21,806	0/1:7,0:7:73.15:78,0,73	0/0:14,0:14:36.11:0,36,777	0/0:5,0:5:15.05:0,15,366	0/0:5,0:5:15.04:0,15,306	0/0:24,0:24:69.23:0,69,1501	0/1:22,3:23:16.20:16,0,726	0/0:12,0:8:24.03:0,24,386	0/0:5,0:5:15.05:0,15,312	0/0:108,0:100:99:0,246,5386	0/0:2,0:2:6.02:0,6,164	./.	1/1:16,0:14:2.84:14,3,0	0/0:15,0:15:36.12:0,36,907	1/1:8,2:9:22.83:208,23,0	0/0:4,0:4:12.04:0,12,301	1/1:5,4:9:9.03:135,9,0
chr10	70823433	.	CAG	C	245.53	PASS	AB=0.967;AC=8;AF=0.154;AN=52;BaseQRankSum=6.999;DP=459;FS=0.879;HRun=0;HaplotypeScore=65.1872;InbreedingCoeff=0.4786;MQ=48.97;MQ0=13;MQRankSum=-6.806;QD=4.38;ReadPosRankSum=0.104;VQSLOD=2.3006;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:4:12.04:0,12,232	0/0:41,0:4:5.61:0,6,73	0/0:40,0:8:18.06:0,18,305	0/0:8,0:8:24.08:0,24,461	0/0:17,0:17:36.11:0,36,658	0/0:23,0:23:69.24:0,69,1319	0/0:7,0:5:12.01:0,12,195	0/0:9,0:8:21.07:0,21,400	0/1:13,1:12:43.95:98,0,44	0/0:3,0:3:3.01:0,3,58	0/0:16,0:17:33.50:0,33,642	0/1:6,0:6:31.21:31,0,49	0/0:13,0:13:36.12:0,36,683	0/0:5,0:5:15.05:0,15,290	0/0:5,0:5:12.02:0,12,197	0/0:27,0:27:78.03:0,78,1296	0/0:25,0:23:37.49:0,37,652	0/0:14,0:10:27.07:0,27,425	0/0:5,0:5:15.03:0,15,247	0/0:110,1:104:99:0,249,4552	0/0:2,0:2:6.02:0,6,116	./.	1/1:13,3:14:2.03:6,2,0	0/0:14,0:14:36.12:0,36,694	1/1:6,4:9:10.04:194,10,0	0/0:4,0:4:12.04:0,12,230	1/1:10,0:10:8.53:43,9,0
chr10	70823434	.	AGACG	A	288.03	PASS	AB=0.892;AC=7;AF=0.135;AN=52;BaseQRankSum=7.127;DP=450;FS=10.766;HRun=0;HaplotypeScore=74.7743;InbreedingCoeff=0.3873;MQ=49.32;MQ0=11;MQRankSum=-6.920;QD=4.57;ReadPosRankSum=0.281;VQSLOD=0.7009;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:4:12.04:0,12,325	0/0:41,0:5:8.80:0,9,120	0/0:40,0:9:21.01:0,21,284	0/0:8,0:8:24.08:0,24,658	0/0:17,0:17:36.12:0,36,929	0/0:23,0:23:69.15:0,69,1576	0/0:7,0:6:15.02:0,15,299	0/0:9,0:8:21.07:0,21,546	0/1:13,0:11:24.64:25,0,56	0/0:3,0:3:3.01:0,3,71	0/0:16,0:16:33.47:0,33,888	0/1:3,2:5:76.60:114,0,77	0/0:12,0:12:36.12:0,36,883	0/0:5,0:5:15.05:0,15,429	0/0:4,0:4:12.04:0,12,328	0/0:26,0:26:78.14:0,78,1630	0/1:24,1:23:9.04:9,0,603	0/0:11,0:9:26.91:0,27,494	0/0:5,0:5:15.05:0,15,352	0/0:108,1:102:99:0,252,5458	0/0:3,0:3:9.03:0,9,220	./.	0/0:11,5:14:1.55:0,2,4	0/0:14,0:14:36.12:0,36,946	1/1:10,0:9:10.12:160,10,0	0/0:4,0:4:12.04:0,12,332	1/1:4,0:10:9.02:108,9,0
chr10	70823839	.	C	CCAAA	14929.15	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-12.719;DP=717;FS=1.353;HRun=0;HaplotypeScore=107.0780;InbreedingCoeff=0.9999;MQ=79.43;MQ0=0;MQRankSum=-7.322;QD=66.06;ReadPosRankSum=1.562;VQSLOD=6.6828;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,43:49:99:3121,120,0	0/0:11,0:11:33.10:0,33,581	0/0:29,0:29:75.24:0,75,1387	0/0:26,0:25:67.40:0,67,1227	0/0:22,0:22:63.22:0,63,1211	0/0:25,0:25:72.23:0,72,1342	0/0:30,0:30:78.27:0,78,1499	0/0:27,0:27:75.25:0,75,1409	0/0:32,0:32:93.30:0,93,1768	1/1:3,19:24:63.19:1511,63,0	1/1:1,16:19:54.05:1181,54,0	0/0:24,0:24:72.23:0,72,1354	1/1:6,22:29:75.18:1894,75,0	0/0:18,0:18:51.16:0,51,955	0/0:25,0:25:69.24:0,69,1338	0/0:29,0:29:87.28:0,87,1640	0/0:26,0:26:72.20:0,72,1313	1/1:1,15:17:39.13:1049,39,0	0/0:24,0:24:63.22:0,63,1198	0/0:29,0:29:78.26:0,78,1462	0/0:43,0:43:99:0,120,2270	0/0:24,0:24:66.21:0,66,1246	1/1:1,16:17:42.14:1150,42,0	1/1:1,21:22:48.16:1314,48,0	0/0:22,0:22:63.19:0,63,1147	1/1:4,20:25:75.25:1901,75,0	0/0:25,0:25:66.23:0,66,1268	1/1:1,22:24:66.23:1808,66,0
chr10	70829268	.	CT	C	5292.54	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.615;DP=579;FS=2.106;HRun=2;HaplotypeScore=63.3745;InbreedingCoeff=0.9919;MQ=86.91;MQ0=0;MQRankSum=-2.718;QD=38.35;ReadPosRankSum=2.862;VQSLOD=5.5517;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:99:1426,102,0	0/0:4,0:4:12.04:0,12,192	0/0:20,0:20:54.57:0,55,781	0/0:22,0:22:60.02:0,60,834	0/0:13,0:13:39.13:0,39,624	0/0:29,0:29:87.30:0,87,1387	0/0:25,0:25:75.26:0,75,1199	0/0:20,0:20:57.18:0,57,871	0/0:26,0:26:75.25:0,75,1189	0/0:23,0:23:69.20:0,69,1076	0/0:6,0:6:18.06:0,18,288	0/0:18,0:18:54.18:0,54,863	1/1:0,21:21:54.18:755,54,0	0/0:18,0:18:54.18:0,54,853	0/0:16,0:16:48.16:0,48,768	0/0:16,0:16:48.15:0,48,743	0/0:30,0:30:90.29:0,90,1409	0/0:31,0:31:93.32:0,93,1471	0/0:33,0:33:99:0,99,1575	0/0:15,0:15:45.15:0,45,719	0/0:26,0:26:78.23:0,78,1195	0/0:14,0:14:42.14:0,42,669	1/1:0,11:11:30.10:412,30,0	1/1:0,30:30:87.29:1217,87,0	0/0:17,0:17:51.15:0,51,790	1/1:1,27:28:36.27:1063,36,0	0/0:19,0:19:57.07:0,57,853	1/1:0,11:11:30.10:419,30,0
chr10	70829487	.	CAAATAAATAAATAAAT	C	1474.89	PASS	AB=1.000;AC=8;AF=0.160;AN=50;BaseQRankSum=7.288;DP=329;FS=1.826;HRun=0;HaplotypeScore=145.9575;InbreedingCoeff=0.3837;MQ=85.11;MQ0=0;MQRankSum=-5.709;QD=21.69;ReadPosRankSum=1.006;VQSLOD=2.3205;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:9.01:0,9,93	0/0:1,0:2:3.01:0,3,130	./.	0/0:11,0:11:2.60:0,3,10	0/0:12,0:12:9.02:0,9,217	0/0:13,0:13:12.04:0,12,435	0/0:4,0:4:3.01:0,3,228	0/0:21,0:21:42.13:0,42,1057	0/0:9,0:9:15.05:0,15,1049	1/1:6,9:15:27.06:828,27,0	1/1:4,4:8:2.68:132,3,0	0/0:7,0:12:9.02:0,9,445	0/0:9,0:9:5.86:0,6,38	0/0:11,0:11:9.03:0,9,671	0/0:8,0:8:3.01:0,3,228	0/0:11,0:11:12.04:0,12,667	0/0:26,0:26:60.21:0,60,3634	1/1:22,0:22:35.03:423,35,0	0/0:10,0:10:15.05:0,15,1019	0/0:11,0:11:6.02:0,6,300	0/0:13,0:13:12.04:0,12,571	0/0:10,0:10:3.01:0,3,151	./.	./.	0/0:18,0:18:33.10:0,33,1914	0/1:13,0:13:63.70:115,0,64	0/0:11,0:11:18.06:0,18,1079	0/1:10,0:10:99:113,0,225
chr10	70829503	.	TA	T	587.87	PASS	AB=1.000;AC=3;AF=0.056;AN=54;BaseQRankSum=6.626;DP=245;FS=0.799;HRun=3;HaplotypeScore=41.7851;InbreedingCoeff=0.3936;MQ=61.52;MQ0=2;MQRankSum=-6.413;QD=23.51;ReadPosRankSum=2.995;VQSLOD=2.9873;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:12:0,12,148	0/0:3,0:3:6.49:0,6,77	0/0:5,0:4:6:0,6,63	0/0:3,0:3:5.84:0,6,35	0/0:9,0:9:24.08:0,24,333	0/0:13,0:13:39.12:0,39,523	0/0:3,0:3:8.99:0,9,105	0/0:23,0:23:66.20:0,66,891	0/0:6,0:6:18.04:0,18,240	0/0:14,0:14:4.38:0,4,226	0/1:5,0:5:0.23:0,0,37	0/0:9,0:9:18.02:0,18,202	0/0:5,0:5:9.03:0,9,120	0/0:4,0:4:12.04:0,12,172	0/0:4,0:4:12.04:0,12,166	0/0:7,0:7:21.05:0,21,266	0/0:26,0:26:76.49:0,76,1053	1/1:3,17:20:57.16:681,57,0	0/0:11,0:9:24.08:0,24,340	0/0:5,0:5:12.04:0,12,168	0/0:5,0:5:15.05:0,15,211	0/0:3,0:3:6.02:0,6,85	0/0:2,0:2:3.01:0,3,42	./.	0/0:16,0:16:48.16:0,48,676	0/0:5,0:4:12.04:0,12,157	0/0:11,0:11:33.10:0,33,450	0/0:15,0:15:24.08:0,24,326
chr10	70829523	.	TA	T	232.38	PASS	AB=0.857;AC=2;AF=0.038;AN=52;BaseQRankSum=5.561;DP=274;FS=2.393;HRun=3;HaplotypeScore=48.3588;InbreedingCoeff=-0.0695;MQ=52.89;MQ0=4;MQRankSum=-3.284;QD=8.61;ReadPosRankSum=1.242;VQSLOD=0.8930;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:6.02:0,6,86	0/0:4,0:4:9.50:0,10,123	./.	0/1:2,0:2:5.32:5,0,35	0/0:5,0:5:15.05:0,15,206	0/0:14,0:14:36.56:0,37,479	0/0:4,0:4:12.04:0,12,165	0/0:29,0:29:72.68:0,73,958	0/0:7,0:7:21.07:0,21,297	0/0:16,0:16:19.01:0,19,278	0/0:6,0:6:11.14:0,11,132	0/0:9,0:9:18.03:0,18,216	0/0:4,0:4:2.92:0,3,17	0/0:3,0:3:9.03:0,9,130	0/0:3,0:3:9.02:0,9,109	0/0:10,0:10:30.10:0,30,414	0/0:30,0:30:85.51:0,86,1170	0/1:15,10:25:99:305,0,341	0/0:18,0:14:39.13:0,39,532	0/0:5,0:5:15.04:0,15,191	0/0:5,0:5:15.05:0,15,208	0/0:1,0:1:3.01:0,3,43	0/0:4,0:4:3.01:0,3,42	./.	0/0:17,0:17:51.17:0,51,717	0/0:6,0:5:8.82:0,9,75	0/0:12,0:12:36.06:0,36,468	0/0:19,0:19:12.68:0,13,119
chr10	70829527	.	TAAACAAACAAACAAAC	T	1569.32	PASS	AB=1.000;AC=14;AF=0.269;AN=52;BaseQRankSum=8.773;DP=285;FS=5.159;HRun=0;HaplotypeScore=126.9364;InbreedingCoeff=0.5838;MQ=53.12;MQ0=4;MQRankSum=-7.317;QD=16.18;ReadPosRankSum=2.412;VQSLOD=2.0057;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:6.02:68,6,0	0/0:4,0:4:12.04:0,12,482	./.	0/0:2,0:2:2.93:0,3,120	0/0:5,0:5:15.05:0,15,630	0/0:14,0:14:36.06:0,36,1650	0/0:5,0:5:15.05:0,15,630	0/0:28,0:28:69.09:0,69,1857	0/0:7,0:7:21.07:0,21,1113	0/1:16,0:16:99:515,0,201	0/1:7,0:7:83.37:83,0,162	0/0:11,0:11:24.08:0,24,1282	1/1:0,0:4:3.01:57,3,0	0/0:4,0:4:12.04:0,12,707	0/0:3,0:3:9.03:0,9,453	0/0:11,0:11:30.10:0,30,1133	0/0:29,0:29:81.26:0,81,4364	1/1:25,0:25:7.29:320,7,0	0/0:21,0:17:45.09:0,45,2020	0/0:6,0:6:15.05:0,15,661	0/0:5,0:5:15.05:0,15,810	0/0:2,0:2:6.02:0,6,146	1/1:0,4:4:3.01:71,3,0	./.	0/0:18,0:18:51.16:0,51,2251	1/1:1,6:6:12.03:339,12,0	0/0:12,0:12:36.10:0,36,1538	1/1:3,16:19:6.02:275,6,0
chr10	70829738	.	TGGG	T	1125.91	PASS	AB=0.933;AC=13;AF=0.241;AN=54;BaseQRankSum=3.806;DP=359;FS=28.927;HRun=13;HaplotypeScore=57.9343;InbreedingCoeff=0.6523;MQ=74.93;MQ0=2;MQRankSum=-4.929;QD=13.57;ReadPosRankSum=6.955;VQSLOD=-0.1451;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,12:21:30.07:364,30,0	0/0:5,0:5:0:0,0,0	0/0:23,0:13:27.41:0,27,359	0/0:19,0:11:11.86:0,12,140	0/0:8,0:8:9.02:0,9,142	0/0:11,0:12:12.36:0,12,166	0/0:22,0:22:43.26:0,43,660	0/0:9,0:9:9.03:0,9,135	0/0:11,0:11:12.51:0,13,188	0/0:4,0:8:6:0,6,65	0/0:4,0:4:4.26:0,4,45	0/0:16,0:18:27.07:0,27,401	1/1:4,10:15:20.98:237,21,0	0/0:16,0:16:12.04:0,12,188	0/0:11,0:11:15.05:0,15,245	0/0:14,0:14:27.09:0,27,434	0/0:27,0:29:49.06:0,49,691	0/0:4,0:14:25.18:0,25,225	0/1:13,1:14:21.30:21,0,161	./.	0/0:21,0:24:27.04:0,27,324	0/0:2,0:2:3.01:0,3,58	1/1:1,1:2:3.01:36,3,0	1/1:7,13:20:32.75:400,33,0	0/0:5,0:5:3.47:0,3,26	1/1:5,4:9:17.95:199,18,0	0/0:16,0:16:15.52:0,16,251	1/1:0,1:2:1.36:34,1,0
chr10	70832817	.	CCAAA	C	83.48	PASS	AB=0.822;AC=3;AF=0.054;AN=56;BaseQRankSum=4.906;DP=380;FS=21.897;HRun=0;HaplotypeScore=86.7588;InbreedingCoeff=-0.0808;MQ=47.69;MQ0=4;MQRankSum=-3.408;QD=2.04;ReadPosRankSum=0.308;VQSLOD=0.2170;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:8.79:0,9,200	0/0:8,0:8:20.76:0,21,176	0/0:11,0:2:6.02:0,6,104	0/0:13,0:7:12.10:0,12,143	0/0:17,0:18:1.41:0,1,342	0/0:8,0:7:20.91:0,21,222	0/0:11,0:11:3.68:0,4,302	0/0:26,0:27:34.07:0,34,627	0/0:13,0:13:37.64:0,38,406	0/1:11,6:15:99:127,0,106	0/1:10,6:15:44.65:45,0,55	0/0:18,0:16:41.32:0,41,356	0/0:6,0:6:11.81:0,12,75	0/0:6,0:6:15.05:0,15,209	0/0:12,0:11:26.89:0,27,280	0/0:14,0:14:30.27:0,30,328	0/0:24,0:24:36.72:0,37,660	0/0:15,0:15:38.92:0,39,489	0/0:25,0:25:65.33:0,65,690	0/0:10,0:11:22.63:0,23,207	0/1:8,0:8:0.17:0,0,106	0/0:15,0:15:43.15:0,43,426	0/0:9,0:9:15.89:0,16,167	0/0:6,0:6:2.35:0,2,32	0/0:11,0:11:10.96:0,11,305	0/0:13,0:13:27.86:0,28,346	0/0:13,0:12:27.23:0,27,317	0/0:12,0:12:28.26:0,28,232
chr10	70832938	.	ATCTCTCTC	A	1161.14	PASS	AB=0.938;AC=15;AF=0.341;AN=44;BaseQRankSum=-0.836;DP=482;FS=8.683;HRun=0;HaplotypeScore=117.6370;InbreedingCoeff=0.5398;MQ=68.85;MQ0=18;MQRankSum=-0.243;QD=9.52;ReadPosRankSum=2.144;VQSLOD=1.8498;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:4.95:0,5,102	./.	./.	0/0:31,0:19:0.47:0,0,1	./.	0/0:12,0:12:3:0,3,25	0/0:20,0:19:13.33:0,13,330	0/0:31,0:30:12.01:0,12,157	0/0:16,0:16:9.03:0,9,224	0/0:21,0:19:5.23:0,5,84	./.	0/0:11,0:11:8.98:0,9,178	./.	0/1:14,0:13:51.44:51,0,91	0/0:19,0:18:12:0,12,179	0/0:9,0:9:3.48:0,3,103	0/0:25,0:24:12.04:0,12,292	0/0:15,0:15:12.04:0,12,306	1/1:12,0:10:3.01:38,3,0	./.	1/1:21,1:21:20.94:401,21,0	0/0:16,0:14:6.02:0,6,194	1/1:12,1:11:6.02:111,6,0	1/1:11,0:9:5.75:143,6,0	0/0:28,0:28:3.01:0,3,38	1/1:23,1:23:15.05:366,15,0	1/1:6,6:12:6.49:126,6,0	1/1:11,2:11:3:72,3,0
chr10	70833362	.	CCGT	C	2753.37	PASS	AB=0.594;AC=11;AF=0.196;AN=56;BaseQRankSum=15.047;DP=747;FS=11.724;HRun=0;HaplotypeScore=140.5600;InbreedingCoeff=0.8838;MQ=85.17;MQ0=0;MQRankSum=-14.102;QD=22.39;ReadPosRankSum=-2.330;VQSLOD=2.7518;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,22:35:62.79:690,63,0	0/0:10,0:10:30.10:0,30,677	0/0:28,0:28:72.18:0,72,1707	0/0:25,0:26:39.56:0,40,1058	0/0:22,0:22:60.21:0,60,1338	0/0:23,0:22:69.19:0,69,1563	0/0:27,0:27:78.22:0,78,1761	0/0:36,0:36:99:0,108,2473	0/0:22,0:22:60.21:0,60,1418	0/0:31,0:31:87.26:0,87,1956	0/0:15,0:15:45.15:0,45,1035	0/0:38,0:38:99:0,114,2690	1/1:3,20:23:60.19:735,60,0	0/0:24,0:24:72.25:0,72,1639	0/0:46,0:46:99:0,135,3185	0/0:30,0:30:87.25:0,87,1940	0/0:46,0:46:99:0,132,3055	0/0:32,0:32:96.30:0,96,2220	0/0:17,0:17:48.16:0,48,1027	0/0:14,0:14:42.14:0,42,992	0/0:66,0:66:99:0,193,4498	0/0:25,0:25:72.25:0,72,1662	1/1:4,18:22:53.60:580,54,0	1/1:6,11:17:20.87:210,21,0	0/0:29,0:29:81.28:0,81,1913	0/1:6,13:19:93.70:513,0,94	0/0:17,0:17:51.18:0,51,1205	1/1:2,5:7:17.95:203,18,0
chr10	70833367	.	AGCCT	A	3453.91	PASS	AB=0.581;AC=11;AF=0.196;AN=56;BaseQRankSum=15.058;DP=716;FS=11.814;HRun=0;HaplotypeScore=146.3931;InbreedingCoeff=0.8833;MQ=83.83;MQ0=0;MQRankSum=-13.893;QD=34.54;ReadPosRankSum=-2.294;VQSLOD=2.7103;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:24:58.69:781,59,0	0/0:10,0:10:30.10:0,30,828	0/0:26,0:26:75.24:0,75,1891	0/0:24,0:24:47.40:0,47,1618	0/0:23,0:23:69.22:0,69,1843	0/0:22,0:21:66.23:0,66,1800	0/0:25,0:25:69.24:0,69,1931	0/0:35,0:35:99:0,102,2721	0/0:21,0:21:63.22:0,63,1720	0/0:30,0:30:90.31:0,90,2513	0/0:15,0:15:45.15:0,45,1257	0/0:40,0:40:99:0,120,3316	1/1:1,20:21:60.20:871,60,0	0/0:24,0:24:69.24:0,69,1917	0/0:47,0:47:99:0,141,3861	0/0:30,0:30:90.31:0,90,2466	0/0:43,0:43:99:0,129,3547	0/0:32,0:32:96.33:0,96,2673	0/0:16,0:16:48.16:0,48,1284	0/0:16,0:16:48.16:0,48,1227	0/0:65,0:65:99:0,187,5136	0/0:25,0:25:72.25:0,72,1972	1/1:1,18:19:54.07:700,54,0	1/1:1,11:12:19.22:238,19,0	0/0:28,0:28:84.29:0,84,2319	0/1:5,13:18:99:632,0,116	0/0:19,0:19:57.20:0,57,1571	1/1:1,5:6:17.73:233,18,0
chr10	70833900	.	AAC	A	592.83	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.550;DP=798;FS=3.470;HRun=0;HaplotypeScore=94.1026;InbreedingCoeff=0.9997;MQ=79.91;MQ0=0;MQRankSum=-2.462;QD=29.64;ReadPosRankSum=1.997;VQSLOD=5.3754;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,2024	0/0:15,0:15:45.15:0,45,816	0/0:28,0:28:78.18:0,78,1287	0/0:18,0:17:48.16:0,48,853	0/0:37,0:37:99:0,108,1920	0/0:27,0:27:78.25:0,78,1386	0/0:43,0:43:99:0,129,2188	0/0:37,0:37:99:0,99,1747	0/0:27,0:27:81.24:0,81,1413	0/0:26,0:26:69.24:0,69,1259	0/0:26,0:26:78.25:0,78,1388	0/0:24,0:24:66.21:0,66,1178	0/0:27,0:27:81.28:0,81,1480	0/0:25,0:25:75.24:0,75,1336	0/0:26,0:26:78.24:0,78,1342	0/0:26,0:26:78.27:0,78,1430	0/0:49,0:49:99:0,141,2519	1/1:2,18:20:48.16:688,48,0	0/0:29,0:28:78.23:0,78,1314	0/0:28,0:28:84.27:0,84,1501	0/0:39,0:39:99:0,114,2074	0/0:26,0:26:72.25:0,72,1318	0/0:31,0:31:93.30:0,93,1656	0/0:24,0:24:69.24:0,69,1253	0/0:33,0:32:96.33:0,96,1740	0/0:37,0:37:99:0,102,1815	0/0:19,0:18:54.18:0,54,969	0/0:12,0:12:33.11:0,33,605
chr10	70834454	.	TC	T	809.74	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.603;DP=641;FS=21.627;HRun=3;HaplotypeScore=65.5685;InbreedingCoeff=0.9945;MQ=78.04;MQ0=0;MQRankSum=-2.129;QD=28.92;ReadPosRankSum=2.022;VQSLOD=1.9535;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,1678	0/0:15,0:15:42.14:0,42,604	0/0:17,0:14:39.13:0,39,545	0/0:21,0:21:56.82:0,57,700	0/0:21,0:21:63.16:0,63,834	0/0:20,0:20:57.19:0,57,821	0/0:34,0:34:99:0,99,1423	0/0:28,0:28:78.25:0,78,1095	0/0:36,0:36:99:0,108,1518	1/1:0,20:20:57.18:706,57,0	1/1:1,7:8:18.06:223,18,0	0/0:22,0:22:66.19:0,66,897	0/0:15,0:15:39.13:0,39,557	0/0:24,0:24:69.21:0,69,974	0/0:21,0:21:63.20:0,63,888	0/0:19,0:19:54.18:0,54,778	0/0:31,0:31:87.28:0,87,1234	0/0:19,0:19:54.18:0,54,778	0/0:12,0:12:33.08:0,33,433	0/0:18,0:18:48.16:0,48,691	0/0:43,0:43:99:0,117,1640	0/0:22,0:22:54.18:0,54,776	0/0:13,0:13:24.06:0,24,326	0/0:26,0:26:78.26:0,78,1123	0/0:31,0:31:90.27:0,90,1245	0/0:22,0:22:63.21:0,63,905	0/0:29,0:29:81.25:0,81,1131	0/0:13,0:13:36.09:0,36,473
chr10	70835984	.	AC	A	4261.27	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.743;DP=706;FS=8.643;HRun=5;HaplotypeScore=80.4199;InbreedingCoeff=0.9995;MQ=83.40;MQ0=0;MQRankSum=-2.220;QD=31.10;ReadPosRankSum=2.435;VQSLOD=5.3235;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:41:99:1327,117,0	0/0:11,0:11:30.08:0,30,388	0/0:23,0:23:59.99:0,60,757	0/0:20,0:19:39.12:0,39,507	0/0:19,0:19:51.13:0,51,648	0/0:21,0:21:60.19:0,60,805	0/0:27,0:27:75.23:0,75,1007	0/0:42,0:42:99:0,111,1504	0/0:29,0:29:78.24:0,78,1050	0/0:36,0:36:99:0,102,1394	0/0:16,0:16:45.12:0,45,578	0/0:27,0:27:78.26:0,78,1053	1/1:1,20:21:54.15:612,54,0	0/0:30,0:30:87.27:0,87,1169	0/0:38,0:38:99:0,111,1501	0/0:23,0:23:69.23:0,69,944	0/0:22,0:22:66.21:0,66,882	0/0:33,0:32:93.31:0,93,1272	0/0:28,0:28:75.21:0,75,978	0/0:20,0:20:57.17:0,57,750	0/0:39,0:39:99:0,108,1443	0/0:18,0:18:51.16:0,51,681	1/1:0,18:18:54.15:612,54,0	1/1:1,24:25:28.17:707,28,0	0/0:22,0:22:63.19:0,63,825	1/1:0,21:21:63.16:696,63,0	0/0:25,0:25:75.25:0,75,1023	1/1:2,9:11:27.08:306,27,0
chr10	70836058	.	T	TA	1701.33	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.655;DP=755;FS=2.013;HRun=1;HaplotypeScore=98.6816;InbreedingCoeff=0.9990;MQ=87.74;MQ0=0;MQRankSum=-1.064;QD=40.51;ReadPosRankSum=0.112;VQSLOD=3.7032;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,150,1934	0/0:9,0:9:27.02:0,27,314	0/0:30,0:30:87.26:0,87,1103	0/0:24,0:24:63.20:0,63,801	0/0:18,0:18:45.12:0,45,552	0/0:32,0:32:84.27:0,84,1091	0/0:31,0:31:93.29:0,93,1191	0/0:30,0:30:87.28:0,87,1130	0/0:32,0:32:87.28:0,87,1122	1/1:0,27:27:81.26:1194,81,0	1/1:0,15:15:42.14:629,42,0	0/0:30,0:30:90.28:0,90,1152	0/0:34,0:34:99:0,99,1271	0/0:26,0:26:78.25:0,78,1012	0/0:37,0:36:99:0,105,1363	0/0:29,0:29:84.27:0,84,1091	0/0:31,0:31:93.30:0,93,1201	0/0:27,0:26:78.25:0,78,1012	0/0:17,0:17:45.14:0,45,572	0/0:14,0:14:42.14:0,42,544	0/0:55,0:55:99:0,160,2047	0/0:22,0:22:60.18:0,60,764	0/0:13,0:13:33.09:0,33,414	0/0:37,0:37:99:0,108,1401	0/0:20,0:20:60.20:0,60,778	0/0:27,0:27:75.24:0,75,961	0/0:25,0:25:75.24:0,75,967	0/0:11,0:11:30.07:0,30,372
chr10	70836234	.	A	AC	8645.31	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-15.792;DP=812;FS=5.684;HRun=1;HaplotypeScore=76.0737;InbreedingCoeff=1.0000;MQ=89.08;MQ0=0;MQRankSum=-7.095;QD=44.56;ReadPosRankSum=4.828;VQSLOD=4.2137;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,59:59:99:2443,154,0	0/0:15,0:15:45.14:0,45,610	0/0:35,0:35:99:0,102,1292	0/0:24,0:24:72:0,72,856	0/0:18,0:18:54.18:0,54,755	0/0:23,0:23:69.20:0,69,931	0/0:34,0:34:99:0,102,1386	0/0:35,0:35:99:0,102,1365	0/0:24,0:24:69.23:0,69,962	0/0:33,0:33:96.15:0,96,1329	0/0:20,0:20:51.14:0,51,679	0/0:32,0:32:93.31:0,93,1300	1/1:0,35:35:99:1675,105,0	0/0:31,0:31:90.29:0,90,1243	0/0:28,0:28:84.25:0,84,1125	0/0:23,0:23:69.23:0,69,965	0/0:42,0:42:99:0,120,1577	0/0:18,0:18:54.18:0,54,755	0/0:27,0:27:72.23:0,72,974	0/0:30,0:30:87.28:0,87,1199	0/0:35,0:35:99:0,102,1418	0/0:34,0:34:99:0,99,1364	1/1:0,17:17:48.16:766,48,0	1/1:0,37:37:99:1677,105,0	0/0:27,0:27:81.25:0,81,1115	1/1:1,32:33:93.30:1461,93,0	0/0:30,0:30:90.30:0,90,1258	1/1:0,13:13:39.13:623,39,0
chr10	70837624	.	CTCCACCTAAGAA	C	6102.40	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.202;DP=535;FS=7.374;HRun=0;HaplotypeScore=184.9570;InbreedingCoeff=0.9871;MQ=103.08;MQ0=0;MQRankSum=-11.024;QD=75.34;ReadPosRankSum=3.306;VQSLOD=4.2265;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:27.09:1038,27,0	0/0:13,0:13:39.13:0,39,2342	0/0:37,0:37:99:0,111,5732	0/0:34,0:34:99:0,100,4515	0/0:24,0:24:72.25:0,72,4204	0/0:20,0:20:57.18:0,57,3039	0/0:30,0:30:90.28:0,90,4862	0/0:32,0:32:96.32:0,96,5545	0/0:16,0:16:48.16:0,48,2948	1/1:0,10:10:30.10:1106,30,0	1/1:0,6:6:12.04:474,12,0	0/0:24,0:24:72.25:0,72,4279	1/1:0,7:7:15.05:592,15,0	0/0:14,0:14:42.14:0,42,2672	0/0:16,0:16:48.16:0,48,2733	0/0:15,0:15:45.15:0,45,2686	0/0:32,0:32:96.30:0,96,5304	0/0:27,0:27:81.28:0,81,4526	0/0:22,0:22:66.20:0,66,3488	0/0:14,0:14:42.14:0,42,2308	0/0:30,0:30:87.28:0,87,4783	0/0:20,0:20:60.21:0,60,3801	1/1:0,10:10:18.06:711,18,0	1/1:0,18:18:20.63:828,21,0	0/0:16,0:16:48.15:0,48,2853	1/1:0,7:7:18.06:642,18,0	0/0:18,0:18:54.19:0,54,3311	1/1:0,8:8:18.06:712,18,0
chr10	70838333	.	ACACACATG	A	378.71	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=5.112;DP=570;FS=1.174;HRun=0;HaplotypeScore=150.4960;InbreedingCoeff=0.8554;MQ=51.96;MQ0=15;MQRankSum=-3.604;QD=16.47;ReadPosRankSum=-1.372;VQSLOD=2.9519;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:39.48:0,39,1407	0/0:4,0:4:9.03:0,9,273	0/0:18,0:3:6.02:0,6,127	0/0:19,0:7:18.01:0,18,441	0/0:15,0:14:33.11:0,33,1193	0/0:20,0:20:36.12:0,36,1426	0/0:28,0:27:57.20:0,57,2213	0/0:35,0:31:54.19:0,54,1722	0/0:17,0:17:39.13:0,39,1315	1/1:7,7:13:20.66:394,21,0	./.	0/0:15,0:15:27.07:0,27,958	0/0:12,0:12:21.07:0,21,742	0/0:9,0:9:12.04:0,12,347	0/0:16,0:16:27.09:0,27,897	0/0:12,0:12:27.08:0,27,922	0/0:32,0:32:60.20:0,60,1967	1/1:9,0:9:11.52:99,12,0	0/0:20,0:19:36.12:0,36,1046	0/0:18,0:18:48.16:0,48,1652	0/0:77,0:72:99:0,129,4491	0/0:18,0:18:30.10:0,30,995	0/0:15,0:15:27.09:0,27,816	0/0:39,0:39:87.77:0,88,3258	0/0:17,0:16:39.13:0,39,1445	0/0:32,0:31:63.17:0,63,2048	0/0:17,0:17:36.11:0,36,1171	0/0:4,0:4:9.03:0,9,301
chr10	70838339	.	ATG	A	225.81	PASS	AB=0.800;AC=3;AF=0.056;AN=54;BaseQRankSum=5.851;DP=561;FS=1.021;HRun=0;HaplotypeScore=89.6089;InbreedingCoeff=0.5750;MQ=51.76;MQ0=15;MQRankSum=-3.852;QD=11.29;ReadPosRankSum=-1.816;VQSLOD=3.2020;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:48.05:0,48,935	0/0:4,0:4:12.04:0,12,233	0/0:23,1:5:15.01:0,15,216	0/0:17,3:6:18.06:0,18,343	0/0:15,0:14:42.14:0,42,828	0/0:18,0:18:42.14:0,42,816	0/0:28,0:27:75.24:0,75,1443	0/0:30,0:28:75.73:0,76,1468	0/0:18,0:18:51.17:0,51,983	0/1:9,3:11:23.13:219,0,23	./.	0/0:16,1:17:33.11:0,33,658	0/0:12,0:12:30.10:0,30,587	0/0:7,0:7:15.05:0,15,302	0/0:16,0:16:42.13:0,42,804	0/0:12,0:12:36.12:0,36,715	0/0:33,0:33:73.55:0,74,1366	1/1:8,0:8:10.86:105,11,0	0/0:22,0:21:25.40:0,25,968	0/0:16,0:16:48.16:0,48,974	0/0:73,0:69:99:0,174,3272	0/0:16,0:16:42.13:0,42,772	0/0:16,0:16:33.09:0,33,602	0/0:36,0:36:93.32:0,93,1872	0/0:16,0:15:42.14:0,42,835	0/0:31,0:30:84.26:0,84,1595	0/0:16,0:16:48.16:0,48,923	0/0:5,0:5:15.05:0,15,270
chr10	70844748	.	TAC	T	1962.49	PASS	AB=0.808;AC=13;AF=0.241;AN=54;BaseQRankSum=8.022;DP=657;FS=0.000;HRun=0;HaplotypeScore=85.2089;InbreedingCoeff=0.5807;MQ=66.62;MQ0=3;MQRankSum=1.498;QD=10.49;ReadPosRankSum=1.618;VQSLOD=3.1314;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,20:32:43.67:479,44,0	0/0:10,0:10:21.07:0,21,320	./.	0/0:25,0:16:3.01:0,3,46	0/1:21,1:22:3.83:4,0,381	0/0:22,0:22:33.11:0,33,500	0/0:30,1:32:10.88:0,11,587	0/0:24,0:23:9.03:0,9,126	0/0:25,0:25:17.39:0,17,684	0/0:25,0:27:51.06:0,51,609	0/0:20,0:22:5.99:0,6,50	0/0:26,0:26:48.16:0,48,722	0/1:7,13:21:16.17:255,0,16	0/0:21,0:21:57.19:0,57,865	0/0:33,4:37:1.36:0,1,850	0/0:23,2:25:8.21:0,8,555	0/0:27,0:27:14.31:0,14,644	0/0:8,0:21:30.03:0,30,314	0/0:14,0:13:7.27:0,7,94	0/0:18,0:18:36.11:0,36,528	0/0:29,0:29:38.38:0,38,969	0/1:22,4:26:16.68:17,0,631	1/1:7,11:19:26.91:285,27,0	1/1:6,13:17:24.07:271,24,0	0/0:20,1:21:5.21:0,5,517	1/1:16,16:32:15.24:485,15,0	0/0:14,0:14:25.33:0,25,368	1/1:4,11:14:30.08:340,30,0
chr10	70845559	.	G	GGAGGGA	3158.61	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.815;DP=664;FS=0.621;HRun=0;HaplotypeScore=146.2696;InbreedingCoeff=0.9914;MQ=59.38;MQ0=9;MQRankSum=-6.338;QD=60.74;ReadPosRankSum=-1.117;VQSLOD=3.5372;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:48.25:0,48,1588	0/0:9,0:9:27.09:0,27,637	0/0:50,0:20:45.01:0,45,822	0/0:34,0:13:15.78:0,16,496	0/0:15,0:15:45.15:0,45,1108	0/0:24,0:24:72.24:0,72,1614	0/0:31,0:31:77.88:0,78,1667	0/0:20,0:19:45.84:0,46,977	0/0:21,0:21:63.22:0,63,1386	1/1:0,22:25:66.22:2042,66,0	1/1:1,23:27:36.12:1238,36,0	0/0:35,0:35:99:0,99,2305	0/0:14,0:14:39.13:0,39,929	0/0:28,0:27:75.26:0,75,1692	0/0:25,0:25:69.23:0,69,1604	0/0:21,0:21:63.20:0,63,1332	0/0:22,0:21:60.21:0,60,1396	0/0:21,0:21:57.19:0,57,1277	0/0:18,0:16:45.15:0,45,984	0/0:8,0:8:24.04:0,24,505	0/0:33,0:33:90.31:0,90,2060	0/0:22,0:21:60.21:0,60,1416	0/0:24,0:24:54.19:0,54,1308	0/0:29,0:29:87.30:0,87,1969	0/0:20,0:20:57.17:0,57,1232	0/0:26,0:26:41.12:0,41,1699	0/0:16,0:16:48.15:0,48,1127	0/0:14,0:14:39.13:0,39,867
chr10	70845616	.	GGAGA	G	4417.70	PASS	AB=0.605;AC=11;AF=0.196;AN=56;BaseQRankSum=8.660;DP=712;FS=4.542;HRun=0;HaplotypeScore=127.3910;InbreedingCoeff=0.8638;MQ=61.32;MQ0=13;MQRankSum=-0.402;QD=28.87;ReadPosRankSum=4.316;VQSLOD=4.7250;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,32:37:63.14:1055,63,0	0/0:5,0:5:12.01:0,12,246	0/0:38,0:16:11.18:0,11,361	0/0:59,0:24:19.06:0,19,366	0/0:23,0:23:56.91:0,57,1069	0/0:26,0:28:62.97:0,63,1373	0/0:37,0:37:83.61:0,84,1815	0/0:25,0:24:54.14:0,54,990	0/0:28,0:28:66.23:0,66,1570	0/0:28,0:28:69.12:0,69,1173	0/0:21,0:21:30.10:0,30,571	0/0:23,0:23:51.14:0,51,1141	1/1:2,17:19:35.15:560,35,0	0/0:30,0:30:69.18:0,69,1470	0/0:22,0:22:51.07:0,51,985	0/0:17,0:17:39.12:0,39,892	0/0:33,0:33:87.24:0,87,1917	0/0:7,0:15:11.21:0,11,458	0/0:18,0:17:27.09:0,27,652	0/0:9,0:9:24.06:0,24,551	0/0:36,0:37:68.97:0,69,1294	0/0:21,0:21:54.16:0,54,1173	1/1:3,18:21:33:562,33,0	1/1:7,27:34:66.23:1132,66,0	0/0:20,0:22:59.72:0,60,1063	0/1:9,17:26:82.71:595,0,83	0/0:16,0:16:39.13:0,39,927	1/1:2,13:15:30.10:514,30,0
chr10	70846215	.	GGT	G	400.22	PASS	AB=0.921;AC=19;AF=0.413;AN=46;BaseQRankSum=3.462;DP=614;FS=0.971;HRun=0;HaplotypeScore=83.0870;InbreedingCoeff=0.0361;MQ=77.24;MQ0=12;MQRankSum=1.826;QD=1.28;ReadPosRankSum=1.835;VQSLOD=1.3427;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:17.99:0,18,155	0/0:12,0:12:11.87:0,12,148	./.	./.	0/0:19,0:19:9.01:0,9,110	0/1:19,1:21:22.61:23,0,66	0/1:24,2:26:25.61:26,0,35	./.	0/0:14,0:14:15.05:0,15,216	./.	1/1:8,0:9:0.47:1,0,0	0/1:14,1:15:19.61:20,0,79	1/1:9,0:10:2.84:14,3,0	0/1:17,3:20:34.59:54,0,35	0/1:16,0:17:2.11:2,0,117	0/0:21,0:21:6.02:0,6,87	0/0:27,0:26:24.04:0,24,324	0/1:21,0:26:9.82:19,0,10	1/1:19,0:19:6.01:62,6,0	./.	0/1:56,1:56:34.96:35,0,189	0/1:20,1:21:18.94:26,0,19	1/1:14,0:15:3.31:15,3,0	1/1:31,7:38:23.73:235,24,0	0/0:13,0:13:9.03:0,9,129	0/0:30,0:28:29.03:0,29,254	0/1:16,1:17:13.60:14,0,161	0/0:11,0:11:3:0,3,26
chr10	70847043	.	T	TG	1794.44	PASS	AB=0.947;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.350;DP=668;FS=0.000;HRun=7;HaplotypeScore=90.6861;InbreedingCoeff=0.8355;MQ=73.43;MQ0=7;MQRankSum=-3.060;QD=18.13;ReadPosRankSum=1.030;VQSLOD=3.2745;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:63.97:0,64,378	0/0:12,0:12:33.05:0,33,319	0/0:52,0:39:41.17:0,41,561	0/0:40,0:28:24.54:0,25,409	0/0:36,0:36:99:0,102,982	0/0:22,0:22:63.10:0,63,608	0/0:30,0:30:80.94:0,81,761	0/0:28,0:28:59.92:0,60,564	0/0:15,0:15:45.07:0,45,434	1/1:5,28:32:75.20:881,75,0	1/1:3,15:18:48.11:563,48,0	0/0:17,0:17:48.08:0,48,463	0/0:16,0:16:34.16:0,34,183	0/0:15,0:15:42.07:0,42,405	0/0:13,0:13:39.06:0,39,377	0/0:15,0:15:38.99:0,39,361	0/0:41,0:41:99:0,120,1158	1/1:30,0:29:68.18:454,68,0	0/0:12,0:12:27.04:0,27,260	0/0:16,0:16:39.06:0,39,376	0/0:26,0:26:66.41:0,66,612	0/0:17,0:17:45.07:0,45,432	0/0:23,0:23:30.46:0,30,270	0/0:31,0:31:54.47:0,54,369	0/0:27,0:27:72.05:0,72,677	0/1:17,1:18:45.37:45,0,142	0/0:20,0:20:60.07:0,60,571	0/0:16,0:16:33.32:0,33,183
chr10	70847044	.	G	GT	1244.51	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=0.870;DP=665;FS=0.479;HRun=1;HaplotypeScore=91.9586;InbreedingCoeff=0.4954;MQ=72.26;MQ0=7;MQRankSum=-2.707;QD=15.18;ReadPosRankSum=2.914;VQSLOD=3.6345;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.11:0,87,1014	0/0:12,0:12:36.09:0,36,477	0/0:48,0:36:63.63:0,64,857	0/0:40,0:28:38.44:0,38,612	0/0:37,0:37:99:0,108,1461	0/0:22,0:22:66.21:0,66,900	0/0:31,0:31:90.18:0,90,1164	0/0:27,0:27:78.12:0,78,951	0/0:15,0:15:45.15:0,45,622	0/1:34,0:33:24.48:183,0,24	0/1:18,0:18:10.33:144,0,10	0/0:17,0:17:51.15:0,51,683	0/0:14,0:14:41.48:0,41,494	0/0:15,0:15:45.12:0,45,603	0/0:13,0:13:39.13:0,39,544	0/0:15,0:15:45.13:0,45,584	0/0:41,0:41:99:0,123,1666	1/1:0,30:29:69.23:1033,69,0	0/0:12,0:12:36.07:0,36,431	0/0:17,0:17:42.13:0,42,563	0/0:26,0:26:72.68:0,73,939	0/0:16,0:16:48.15:0,48,655	0/0:23,0:23:61.03:0,61,722	0/0:31,0:31:90.72:0,91,1116	0/0:27,0:27:81.24:0,81,1045	0/0:18,0:18:34.05:0,34,512	0/0:20,0:20:60.20:0,60,827	0/0:16,0:16:48.08:0,48,548
chr10	70847312	.	G	GTTGTTTTGTT	6582.20	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-4.773;DP=777;FS=2.558;HRun=0;HaplotypeScore=217.6231;InbreedingCoeff=0.9785;MQ=77.82;MQ0=0;MQRankSum=-10.619;QD=91.42;ReadPosRankSum=-0.411;VQSLOD=4.8606;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,120,3702	0/0:12,0:12:33.11:0,33,1014	0/0:28,0:28:57.09:0,57,1525	0/0:29,0:29:60.14:0,60,1593	0/0:35,0:35:99:0,99,2982	0/0:29,0:29:75.71:0,76,2225	0/0:27,0:27:38.46:0,38,1766	0/0:35,0:35:81.24:0,81,2070	0/0:28,0:28:84.27:0,84,2541	1/1:15,17:36:72.25:3496,72,0	1/1:6,12:23:54.10:2224,54,0	0/0:33,0:33:81.26:0,81,2279	0/0:21,0:21:51.17:0,51,1544	0/0:33,0:33:81.26:0,81,2374	0/0:23,0:23:60.21:0,60,1711	0/0:25,0:25:69.24:0,69,2042	0/0:38,0:38:99:0,108,3133	1/1:3,5:13:18.06:862,18,0	0/0:22,0:22:57.14:0,57,1525	0/0:30,0:30:90.27:0,90,2574	0/0:45,0:45:99:0,120,3538	0/0:24,0:24:72.23:0,72,2110	0/0:25,0:25:75.24:0,75,2210	0/0:18,0:18:51.17:0,51,1458	0/0:19,0:19:57.18:0,57,1556	0/0:36,0:36:9.57:0,10,2821	0/0:31,0:30:81.25:0,81,2129	0/0:14,0:14:30.10:0,30,949
chr10	70848584	.	C	CTGTGTGTG	588.41	PASS	AB=0.976;AC=12;AF=0.240;AN=50;BaseQRankSum=1.684;DP=831;FS=23.637;HRun=0;HaplotypeScore=207.1656;InbreedingCoeff=0.1137;MQ=54.85;MQ0=26;MQRankSum=-0.833;QD=2.74;ReadPosRankSum=-3.929;VQSLOD=-0.1232;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:35:5.47:0,5,25	0/1:15,0:14:18.05:18,0,196	./.	./.	0/0:21,0:21:15.01:0,15,229	0/0:23,0:23:29.16:0,29,493	0/0:30,0:33:23.73:0,24,522	1/1:28,0:25:1.72:4,2,0	0/0:35,0:36:15.49:0,15,510	0/1:21,0:30:70.09:79,0,70	0/0:16,0:23:6.02:0,6,103	0/0:42,0:41:12.03:0,12,398	1/1:15,12:27:6.02:171,6,0	0/0:34,0:34:35.89:0,36,803	0/1:35,0:36:37.21:37,0,619	0/0:37,0:40:25.55:0,26,810	0/0:33,0:34:43.01:0,43,827	0/1:15,0:15:45.43:46,0,45	0/0:28,0:27:8.82:0,9,158	0/1:19,0:21:28.44:28,0,162	0/0:69,0:68:41.41:0,41,635	0/0:27,0:28:9.03:0,9,173	./.	0/0:26,10:36:1.76:0,2,72	0/0:10,0:14:15.05:0,15,312	0/1:24,0:26:21.51:272,0,22	0/0:17,0:17:13.48:0,13,279	1/1:8,0:13:3.01:70,3,0
chr10	70849664	.	C	CT	3098.49	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=4.877;DP=613;FS=4.629;HRun=10;HaplotypeScore=70.0269;InbreedingCoeff=0.9231;MQ=74.64;MQ0=0;MQRankSum=-1.569;QD=14.21;ReadPosRankSum=0.425;VQSLOD=3.8780;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:26.20:294,26,0	0/0:7,0:7:17.98:0,18,148	0/0:18,0:19:32.20:0,32,234	0/1:9,0:9:8.20:8,0,82	0/0:20,0:20:50.94:0,51,419	0/0:19,0:20:52.97:0,53,425	0/0:10,0:10:29.96:0,30,246	0/0:24,0:24:25.10:0,25,368	0/0:22,0:22:50.93:0,51,419	1/1:7,29:36:81.17:847,81,0	1/1:7,22:29:60.08:616,60,0	0/0:22,0:22:59.91:0,60,490	1/1:26,0:26:60.23:323,60,0	0/0:23,0:23:62.87:0,63,507	0/0:27,0:27:65.89:0,66,539	0/0:30,0:30:74.86:0,75,616	0/0:26,0:27:73.93:0,74,593	1/1:4,15:19:36.09:384,36,0	0/0:15,0:15:35.94:0,36,294	0/0:30,0:30:73.92:0,74,597	0/0:16,0:16:41.16:0,41,325	0/0:24,0:24:62.92:0,63,517	1/1:20,0:20:26.96:207,27,0	1/1:21,0:21:29.63:209,30,0	0/0:20,0:20:56.92:0,57,465	1/1:24,2:26:64.55:354,65,0	0/0:39,0:39:99:0,102,837	1/1:5,0:5:11.56:70,12,0
chr10	70849674	.	T	TA	4368.75	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=-2.753;DP=596;FS=1.075;HRun=2;HaplotypeScore=64.2274;InbreedingCoeff=0.6484;MQ=75.25;MQ0=0;MQRankSum=-0.950;QD=20.41;ReadPosRankSum=1.755;VQSLOD=4.9189;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,22:30:80.62:1021,81,0	0/0:9,0:9:27.05:0,27,299	0/0:19,0:19:34.32:0,34,321	0/1:9,0:9:22.88:23,0,134	0/0:20,0:20:57.12:0,57,674	0/0:22,0:22:66.07:0,66,743	0/0:11,0:11:33.09:0,33,396	0/0:22,0:22:57.12:0,57,655	0/0:18,0:18:54.16:0,54,656	0/1:32,0:32:56.81:57,0,61	0/1:27,0:27:56.76:61,0,57	0/0:21,0:21:60.13:0,60,711	1/1:1,26:27:63.21:841,63,0	0/0:21,0:21:57.18:0,57,703	0/0:28,0:28:78.20:0,78,907	0/0:28,0:28:84.23:0,84,1001	0/0:26,0:26:75.13:0,75,889	0/1:17,0:17:13.63:53,0,14	0/0:14,0:14:36.11:0,36,432	0/0:29,0:29:81.12:0,81,954	0/0:15,0:15:39.11:0,39,471	0/0:22,0:22:66.20:0,66,805	1/1:2,19:21:48.16:642,48,0	1/1:1,18:19:48.16:642,48,0	0/0:20,0:20:60.18:0,60,727	1/1:2,22:25:72.05:870,72,0	0/0:37,0:37:99:0,108,1289	1/1:0,7:7:12.04:159,12,0
chr10	70850124	.	CG	C	1828.64	PASS	AC=18;AF=0.333;AN=54;BaseQRankSum=8.410;DP=370;FS=2.653;HRun=2;HaplotypeScore=48.7231;InbreedingCoeff=0.9032;MQ=43.62;MQ0=17;MQRankSum=-6.327;QD=18.66;ReadPosRankSum=2.148;VQSLOD=3.8900;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:16:27.07:326,27,0	0/0:9,0:8:24.05:0,24,314	./.	0/0:14,0:2:2.74:0,3,12	0/0:19,0:19:45.08:0,45,565	0/0:11,0:11:24.03:0,24,278	0/0:12,0:8:12:0,12,153	0/0:19,0:18:50.90:0,51,586	0/0:9,0:9:20.88:0,21,271	1/1:2,13:15:42.11:509,42,0	1/1:1,10:11:18.06:227,18,0	0/0:16,0:15:33.05:0,33,406	1/1:0,6:6:6.02:76,6,0	0/0:13,0:13:24.04:0,24,296	0/0:10,0:10:27.06:0,27,344	0/0:18,0:18:45.12:0,45,626	0/0:32,0:31:63.13:0,63,850	1/1:5,5:8:15:152,15,0	0/0:18,0:17:50.95:0,51,613	0/0:18,0:17:44.61:0,45,582	0/0:11,0:11:30.01:0,30,361	0/0:16,0:12:27.02:0,27,355	1/1:1,17:17:21:266,21,0	1/1:0,3:3:3.01:38,3,0	0/0:8,0:7:18.05:0,18,248	1/1:2,8:10:16.78:317,17,0	0/0:12,0:12:33.04:0,33,393	1/1:5,3:3:9.03:115,9,0
chr10	70850151	.	AAAAAG	A	1919.53	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=6.297;DP=535;FS=33.217;HRun=0;HaplotypeScore=99.8173;InbreedingCoeff=0.8791;MQ=49.79;MQ0=23;MQRankSum=-5.001;QD=12.55;ReadPosRankSum=0.839;VQSLOD=1.3725;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,17:21:27.97:441,28,0	0/0:10,0:9:21.03:0,21,368	0/0:21,0:4:4.21:0,4,78	0/0:36,0:8:9.70:0,10,76	0/0:31,0:31:69.16:0,69,1257	0/0:17,0:17:41.77:0,42,867	0/0:19,0:17:42.12:0,42,910	0/0:30,0:30:58.43:0,58,780	0/0:15,0:14:27.06:0,27,485	1/1:19,1:20:34.72:298,35,0	1/1:18,1:19:30.48:250,30,0	0/0:19,0:18:34.19:0,34,660	1/1:5,6:11:3.01:51,3,0	0/0:14,0:14:24.98:0,25,414	0/0:16,0:16:38.64:0,39,629	0/0:20,0:20:41.91:0,42,666	0/0:31,0:30:50.73:0,51,1129	1/1:17,0:13:0.93:41,1,0	0/0:24,0:23:43.23:0,43,647	0/0:22,0:21:48.12:0,48,929	0/0:9,0:9:21.04:0,21,438	0/0:19,0:16:35.35:0,35,557	1/1:14,5:18:27.03:369,27,0	1/1:1,8:9:6.02:87,6,0	0/0:18,0:18:39.13:0,39,721	1/1:14,13:26:39.22:463,39,0	0/0:11,0:11:30.03:0,30,562	1/1:8,1:5:11.36:116,11,0
chr10	70850152	.	AAAAG	A	1805.05	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=6.630;DP=534;FS=43.519;HRun=0;HaplotypeScore=91.4957;InbreedingCoeff=0.7428;MQ=49.94;MQ0=22;MQRankSum=-5.042;QD=11.95;ReadPosRankSum=-0.261;VQSLOD=1.2173;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,1:21:0.78:246,1,0	0/0:10,0:9:23.95:0,24,363	0/0:21,0:4:4.19:0,4,64	0/0:36,0:8:10.05:0,10,83	0/0:31,0:31:76.02:0,76,1141	0/0:17,0:17:41.36:0,41,770	0/0:19,0:17:45.04:0,45,818	0/0:30,0:30:62.57:0,63,692	0/0:14,0:13:35.69:0,36,497	1/1:15,5:20:33.70:457,34,0	1/1:10,9:19:32.96:379,33,0	0/0:19,0:18:29.62:0,30,600	1/1:11,0:11:3.01:37,3,0	0/0:14,0:14:25.13:0,25,388	0/0:16,0:16:38.96:0,39,550	0/0:20,0:20:46.30:0,46,618	0/0:31,0:30:56.90:0,57,1004	1/1:17,0:13:15.73:152,16,0	0/0:24,0:23:46.99:0,47,612	0/0:22,0:21:47.95:0,48,801	0/0:10,0:10:6.79:0,7,387	0/0:19,0:16:34.35:0,34,511	1/1:19,0:18:25.88:260,26,0	1/1:9,0:9:5.95:52,6,0	0/0:18,0:18:39.97:0,40,708	0/1:27,0:26:23.62:331,0,24	0/0:12,0:12:33.06:0,33,538	1/1:7,0:4:1.95:74,2,0
chr10	70850153	.	AAAG	A	1579.41	PASS	AB=0.988;AC=15;AF=0.268;AN=56;BaseQRankSum=7.576;DP=537;FS=32.257;HRun=0;HaplotypeScore=84.6818;InbreedingCoeff=0.6846;MQ=50.17;MQ0=22;MQRankSum=-5.829;QD=10.53;ReadPosRankSum=-1.914;VQSLOD=1.2332;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:21:7.67:194,0,8	0/0:10,0:9:23.97:0,24,320	0/0:21,0:4:4.17:0,4,60	0/0:36,0:8:8.92:0,9,73	0/0:31,0:31:69.46:0,69,885	0/0:17,0:17:39.34:0,39,618	0/0:19,0:17:45.01:0,45,663	0/0:32,0:32:65.93:0,66,648	0/0:14,0:13:35.86:0,36,427	1/1:18,2:20:31.92:391,32,0	1/1:17,2:19:32.74:292,33,0	0/0:19,0:18:23.18:0,23,476	1/1:11,0:11:3:28,3,0	0/0:13,0:13:29.20:0,29,346	0/0:16,0:16:38.62:0,39,444	0/0:20,0:20:37.96:0,38,526	0/0:32,0:31:53.34:0,53,824	1/1:7,10:13:17.99:205,18,0	0/0:24,0:23:42.98:0,43,530	0/0:23,0:22:50.78:0,51,664	0/0:10,0:10:19.31:0,19,329	0/0:20,0:17:19.01:0,19,424	1/1:19,0:18:26.12:245,26,0	1/1:9,0:9:5.75:40,6,0	0/0:18,0:18:39.02:0,39,594	0/1:25,1:25:48.19:304,0,48	0/0:12,0:12:33.05:0,33,455	0/1:7,0:4:3.08:60,0,3
chr10	70850155	.	AG	A	1083.48	PASS	AB=0.977;AC=20;AF=0.357;AN=56;BaseQRankSum=7.749;DP=518;FS=3.995;HRun=1;HaplotypeScore=67.8042;InbreedingCoeff=0.4576;MQ=51.23;MQ0=18;MQRankSum=-5.839;QD=4.99;ReadPosRankSum=-1.510;VQSLOD=-0.0184;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,1:21:5.29:106,0,5	0/0:9,0:8:24.02:0,24,235	0/0:21,0:4:8.84:0,9,48	0/0:36,0:8:8.11:0,8,53	0/0:30,0:30:42.42:0,42,464	0/0:15,1:16:7.33:0,7,307	0/0:19,0:18:43.74:0,44,376	0/0:30,0:30:54.33:0,54,452	0/0:13,1:13:14.70:0,15,251	1/1:19,0:19:41.88:317,42,0	1/1:16,1:17:29.57:191,30,0	0/1:18,0:17:14.80:15,0,188	1/1:10,0:10:2.78:17,3,0	0/0:13,0:13:24.19:0,24,183	0/0:16,1:17:5.30:0,5,217	0/1:17,2:19:9.56:10,0,226	0/0:33,0:32:35.86:0,36,435	1/1:15,1:13:17.37:115,17,0	0/1:21,0:20:1.51:2,0,296	0/0:21,1:21:27.38:0,27,331	0/0:10,0:10:8.19:0,8,197	0/1:20,0:17:2.94:3,0,191	1/1:16,0:15:17.33:173,17,0	1/1:9,0:9:3.40:18,3,0	0/0:18,0:18:21.71:0,22,302	0/1:24,0:23:57.33:214,0,57	0/0:13,0:13:34.91:0,35,302	1/1:7,0:6:1.45:83,1,0
chr10	70851902	.	C	CTCTCTCTCTCTT	6220.49	PASS	AB=0.901;AC=15;AF=0.268;AN=56;BaseQRankSum=5.330;DP=850;FS=17.127;HRun=0;HaplotypeScore=270.1524;InbreedingCoeff=0.6766;MQ=53.95;MQ0=15;MQRankSum=-9.067;QD=25.92;ReadPosRankSum=-1.796;VQSLOD=2.5342;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:34:35.79:825,36,0	0/0:12,0:12:32.84:0,33,551	0/0:41,0:5:3:0,3,25	0/0:65,0:21:31.10:0,31,323	0/0:37,0:36:84.62:0,85,2218	0/0:23,0:23:56.98:0,57,1117	0/0:33,0:33:71.70:0,72,1694	0/0:44,0:40:98.86:0,99,1348	0/0:26,0:26:72.16:0,72,1937	0/1:35,0:35:99:799,0,193	0/1:24,0:24:99:280,0,109	0/0:28,0:28:58.94:0,59,1678	1/1:9,14:24:27.09:843,27,0	0/0:32,0:32:84.02:0,84,1880	0/0:33,0:33:84.23:0,84,2485	0/0:33,0:33:87.09:0,87,2077	0/0:25,0:25:7.13:0,7,1343	0/1:11,0:17:21.79:702,0,22	0/0:28,0:26:69.13:0,69,1430	0/0:26,0:26:72.10:0,72,1571	0/0:49,0:48:99:0,106,2411	0/0:29,0:28:65.41:0,65,1390	1/1:12,17:34:9.36:228,9,0	1/1:7,16:29:23.28:416,23,0	0/0:26,0:26:62.83:0,63,1536	1/1:7,12:23:53.97:1499,54,0	0/0:19,0:18:54.10:0,54,1458	1/1:13,0:16:21.04:629,21,0
chr10	70852002	.	T	TAC	5226.65	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-3.960;DP=1011;FS=2.175;HRun=0;HaplotypeScore=116.9612;InbreedingCoeff=0.9602;MQ=51.69;MQ0=43;MQRankSum=0.832;QD=28.25;ReadPosRankSum=1.776;VQSLOD=6.4537;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,26:40:48.12:749,48,0	0/0:16,0:16:33.09:0,33,405	0/0:28,0:3:3.01:0,3,38	0/0:40,0:8:21.01:0,21,245	0/0:30,0:31:75.06:0,75,909	0/0:29,0:28:66.18:0,66,796	0/0:43,0:40:96.22:0,96,1191	0/0:83,0:63:99:0,111,1291	0/0:29,0:29:69.15:0,69,853	0/0:40,0:38:93.28:0,93,1153	0/0:26,0:26:63.20:0,63,801	0/0:35,0:34:80.03:0,80,967	1/1:3,16:20:26.85:449,27,0	0/0:39,0:38:93.28:0,93,1165	0/0:30,0:30:75.23:0,75,940	0/0:35,0:35:61.43:0,61,1006	0/0:46,0:45:80.77:0,81,961	0/0:21,0:20:45.96:0,46,549	0/0:30,0:19:48.14:0,48,597	0/0:24,0:24:57.18:0,57,724	0/0:141,0:137:99:0,295,3604	0/0:30,0:29:60.16:0,60,727	1/1:11,18:29:75.21:1158,75,0	1/1:18,27:41:75.22:1193,75,0	0/0:10,0:10:21.05:0,21,253	1/1:26,16:40:61.46:1474,61,0	0/0:18,0:18:45.14:0,45,568	1/1:3,3:6:15.02:204,15,0
chr10	70852070	.	G	GAC	1567.13	PASS	AB=0.780;AC=11;AF=0.212;AN=52;BaseQRankSum=10.376;DP=846;FS=13.775;HRun=0;HaplotypeScore=124.7777;InbreedingCoeff=0.3722;MQ=49.73;MQ0=38;MQRankSum=-5.682;QD=7.91;ReadPosRankSum=-0.485;VQSLOD=2.5498;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,12:33:97.40:135,0,97	0/0:8,0:8:23.87:0,24,252	./.	./.	0/0:33,0:32:77.53:0,78,939	0/0:36,0:35:69.15:0,69,835	0/0:39,0:37:93.15:0,93,1187	0/0:51,0:37:72.18:0,72,865	0/0:28,0:27:71.71:0,72,890	0/1:25,11:33:99:456,0,113	0/0:9,15:22:5.99:0,6,77	0/0:36,0:36:62.61:0,63,855	1/1:12,7:17:19.27:243,19,0	0/0:31,0:27:69.22:0,69,880	0/0:34,0:34:87.28:0,87,1130	0/0:34,0:34:69.22:0,69,891	0/0:41,0:39:73.15:0,73,949	0/1:9,2:10:84.10:84,0,122	0/0:29,0:21:42.81:0,43,500	0/0:20,0:19:43.02:0,43,542	0/0:116,0:108:99:0,228,2877	0/0:25,0:25:63.19:0,63,791	0/1:18,8:25:24.34:75,0,24	1/1:13,10:18:9.03:143,9,0	0/0:16,0:15:34.94:0,35,461	0/1:29,11:33:99:438,0,182	0/0:20,0:19:41.97:0,42,518	1/1:2,2:4:9.03:149,9,0
chr10	70852130	.	GAC	G	337.55	PASS	AB=0.986;AC=10;AF=0.179;AN=56;BaseQRankSum=9.396;DP=905;FS=18.931;HRun=0;HaplotypeScore=148.3603;InbreedingCoeff=0.5121;MQ=47.51;MQ0=61;MQRankSum=0.852;QD=1.86;ReadPosRankSum=-1.149;VQSLOD=1.5103;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:44,0:34:13.59:93,14,0	0/0:9,0:9:20.73:0,21,268	0/0:8,0:1:2.97:0,3,20	0/1:16,0:4:3.15:3,0,19	0/0:38,0:34:62.12:0,62,1088	0/0:29,2:30:61.38:0,61,909	0/0:41,0:35:81.12:0,81,1241	0/0:75,1:45:99:0,100,1345	0/0:37,1:38:71.05:0,71,941	0/0:59,0:50:85.63:0,86,1077	0/0:30,0:25:21.62:0,22,298	0/0:27,1:27:14.26:0,14,752	0/1:21,0:20:31.84:74,0,32	0/0:40,0:37:95.10:0,95,1482	0/0:30,0:29:66.02:0,66,928	0/0:21,0:20:47.79:0,48,675	0/0:36,1:35:52.13:0,52,917	0/0:9,0:9:18.06:0,18,284	0/0:34,0:25:54.44:0,54,709	0/0:20,0:17:30.08:0,30,445	0/0:105,0:95:99:0,133,2867	0/0:32,0:32:65.08:0,65,1000	1/1:17,0:15:3.90:21,4,0	1/1:32,0:28:23.38:143,23,0	0/0:22,0:19:39:0,39,604	0/1:36,0:28:94.55:103,0,95	0/0:15,0:15:27.09:0,27,435	0/1:14,0:13:2.48:49,0,2
chr10	70852140	.	CACAG	C	2208.54	PASS	AB=0.975;AC=12;AF=0.214;AN=56;BaseQRankSum=8.911;DP=940;FS=6.554;HRun=0;HaplotypeScore=175.6250;InbreedingCoeff=0.4724;MQ=48.31;MQ0=57;MQRankSum=2.115;QD=8.46;ReadPosRankSum=-2.929;VQSLOD=2.1330;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:51,0:44:36.70:453,37,0	0/0:8,0:8:20.97:0,21,375	0/0:17,0:7:7.15:0,7,67	0/0:26,0:6:2.47:0,2,42	0/0:41,0:37:89.66:0,90,1511	0/0:30,0:29:37.74:0,38,1065	0/0:41,0:35:87.09:0,87,1511	0/0:68,0:41:99:0,105,1329	0/0:37,0:37:58.12:0,58,1300	0/1:66,0:57:37.21:37,0,1185	0/0:30,0:25:3.09:0,3,287	0/0:27,0:26:60.94:0,61,1171	1/1:23,0:22:3.85:278,4,0	0/0:41,0:38:77.76:0,78,2226	0/0:29,0:28:60.48:0,60,1011	0/0:22,0:21:37.05:0,37,912	0/0:34,0:32:72.54:0,73,1295	0/1:11,0:11:14.61:15,0,240	0/0:35,0:24:58.52:0,59,880	0/0:21,0:18:17.03:0,17,661	0/0:104,0:93:99:0,121,3762	0/0:30,0:30:69.15:0,69,1455	1/1:21,0:20:21.01:224,21,0	1/1:29,3:28:37.48:491,37,0	0/0:21,0:18:48.11:0,48,965	0/1:36,2:30:41.84:615,0,42	0/0:16,0:16:39.02:0,39,666	0/1:18,1:17:21.08:262,0,21
chr10	70852142	.	CAG	C	2015.15	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=11.651;DP=934;FS=5.561;HRun=0;HaplotypeScore=148.8941;InbreedingCoeff=0.4585;MQ=48.50;MQ0=55;MQRankSum=2.091;QD=6.20;ReadPosRankSum=0.208;VQSLOD=3.1177;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:48,1:43:39.12:379,39,0	0/1:8,0:8:1.39:1,0,220	0/0:19,0:7:4.89:0,5,65	0/1:28,0:7:2.14:2,0,37	0/0:38,1:36:17.27:0,17,1048	0/0:28,0:27:19.04:0,19,768	0/0:40,0:34:76.67:0,77,1160	0/0:68,0:42:94.05:0,94,1109	0/0:37,0:37:41.52:0,42,920	0/1:66,0:57:66.79:67,0,782	0/1:31,0:26:18.28:18,0,184	0/0:27,0:26:22.25:0,22,790	1/1:20,2:22:0.14:222,0,0	0/0:41,0:38:61.13:0,61,1637	0/0:28,0:27:49.75:0,50,769	0/0:23,0:22:7.84:0,8,621	0/0:34,0:32:51.37:0,51,911	0/1:11,0:11:32.56:33,0,206	0/0:35,0:23:54.65:0,55,654	0/0:20,0:18:16.95:0,17,496	0/0:101,0:90:99:0,133,2807	0/0:31,0:31:60.48:0,60,1085	1/1:19,0:18:20.99:192,21,0	1/1:32,1:29:40.19:431,40,0	0/0:22,0:19:40.28:0,40,669	0/1:37,0:29:8.69:520,0,9	0/0:16,0:16:39:0,39,511	1/1:19,0:17:38.42:324,38,0
chr10	70852144	.	GAC	G	559.67	PASS	AB=0.930;AC=15;AF=0.268;AN=56;BaseQRankSum=8.861;DP=929;FS=20.080;HRun=0;HaplotypeScore=155.3161;InbreedingCoeff=0.0287;MQ=48.76;MQ0=53;MQRankSum=3.876;QD=1.52;ReadPosRankSum=3.188;VQSLOD=1.5699;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:50,1:44:5.85:82,0,6	0/1:5,3:8:52.60:53,0,148	0/0:19,0:7:20.24:0,20,214	0/0:27,1:7:14.13:0,14,111	0/1:32,5:34:52.08:52,0,885	0/0:26,1:26:1.69:0,2,483	0/0:39,0:33:19.18:0,19,764	0/0:62,2:41:19.28:0,19,653	0/1:33,3:37:56.87:57,0,693	0/0:48,1:59:52.05:0,52,692	0/0:22,0:24:20.40:0,20,205	0/0:26,2:27:15.38:0,15,653	0/1:22,0:22:26.28:70,0,26	0/0:40,1:38:24.75:0,25,1291	0/1:24,1:24:1.54:2,0,481	0/1:19,5:23:56.61:57,0,515	0/1:33,2:33:11.77:12,0,704	0/0:8,0:12:24.48:0,24,241	0/0:36,0:23:38.49:0,38,549	0/1:20,0:18:34.16:34,0,423	0/0:97,1:88:76.64:0,77,2181	0/0:30,2:32:24.88:0,25,837	0/1:18,0:17:14.23:19,0,14	1/1:34,0:30:10.15:131,10,0	0/0:21,2:20:9.80:0,10,566	1/1:37,0:30:5.89:102,6,0	0/0:17,0:17:29.97:0,30,459	0/1:19,0:17:3.08:49,0,3
chr10	70855029	.	A	AT	5550.14	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-1.953;DP=596;FS=4.042;HRun=8;HaplotypeScore=65.4336;InbreedingCoeff=0.9713;MQ=69.18;MQ0=0;MQRankSum=-0.368;QD=28.76;ReadPosRankSum=3.498;VQSLOD=5.3285;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:33:75.22:865,75,0	0/0:10,0:10:27.01:0,27,247	0/0:15,0:16:28.78:0,29,236	0/0:14,0:14:21.08:0,21,237	0/0:29,0:29:68.96:0,69,621	0/0:18,0:18:44.96:0,45,402	0/0:33,0:33:83.79:0,84,726	0/0:26,0:26:66:0,66,595	0/0:14,0:14:29.95:0,30,265	1/1:2,25:27:50.75:829,51,0	1/1:2,20:23:50.92:551,51,0	0/0:18,0:18:50.95:0,51,452	1/1:1,16:17:33.10:381,33,0	0/0:24,0:24:63.01:0,63,572	0/0:17,0:17:44.81:0,45,380	0/0:12,0:12:29.93:0,30,258	0/0:28,0:28:66:0,66,598	1/1:1,11:12:33.10:381,33,0	0/0:27,0:27:69.02:0,69,628	0/0:26,0:26:74.99:0,75,678	0/0:20,0:20:57.03:0,57,522	0/0:25,0:25:71.84:0,72,629	1/1:2,22:24:60.18:690,60,0	1/1:1,24:26:75.16:849,75,0	0/0:20,0:20:50.87:0,51,443	1/1:0,28:28:84.25:969,84,0	0/0:26,0:26:68.85:0,69,601	1/1:0,3:3:3.01:35,3,0
chr10	70857639	.	TAA	T	1680.50	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=6.854;DP=428;FS=10.414;HRun=13;HaplotypeScore=59.4295;InbreedingCoeff=0.9289;MQ=72.22;MQ0=2;MQRankSum=-0.095;QD=12.83;ReadPosRankSum=3.756;VQSLOD=1.3288;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:45.03:434,45,0	0/0:5,0:5:15.04:0,15,199	0/0:21,0:14:20.07:0,20,192	0/1:14,0:7:2.70:3,0,54	0/0:15,0:18:40.15:0,40,561	0/0:24,0:24:60.16:0,60,815	0/0:9,0:10:24.08:0,24,333	0/0:17,0:21:44.10:0,44,533	0/0:9,0:9:20.40:0,20,232	0/0:17,0:19:37.03:0,37,397	0/0:13,0:14:19.59:0,20,225	0/0:13,0:13:33.10:0,33,454	1/1:5,15:20:32.99:320,33,0	0/0:13,0:13:30.02:0,30,358	0/0:12,0:12:30.08:0,30,399	0/0:9,0:9:27.04:0,27,318	0/0:23,0:27:53.13:0,53,667	1/1:2,0:22:43.89:189,44,0	0/0:15,0:17:35.58:0,36,431	0/0:19,0:20:35.59:0,36,467	0/0:6,0:6:15.04:0,15,199	0/0:8,0:9:23.45:0,23,269	1/1:4,10:16:29.73:274,30,0	1/1:3,9:14:23.39:198,23,0	0/0:19,0:20:48.13:0,48,645	1/1:4,9:14:29.76:274,30,0	0/0:9,0:9:26.56:0,27,320	1/1:3,8:12:20.73:186,21,0
chr10	70858218	.	GCTTCTC	G	5909.22	PASS	AB=0.550;AC=13;AF=0.232;AN=56;BaseQRankSum=13.603;DP=596;FS=11.166;HRun=0;HaplotypeScore=131.4265;InbreedingCoeff=0.8627;MQ=83.85;MQ0=0;MQRankSum=-14.335;QD=51.38;ReadPosRankSum=1.252;VQSLOD=4.7663;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:57.20:1332,57,0	0/0:10,0:10:27.09:0,27,984	0/0:17,0:17:45.15:0,45,1512	0/0:24,0:24:69.24:0,69,2320	0/0:22,0:22:66.23:0,66,2325	0/0:27,0:27:78.27:0,78,2748	0/0:27,0:27:78.27:0,78,2799	0/0:24,0:24:69.23:0,69,2370	0/0:20,0:20:60.21:0,60,2184	0/0:27,0:27:78.27:0,78,2848	0/0:11,0:11:33.11:0,33,1209	0/0:13,0:13:39.13:0,39,1416	1/1:0,16:16:39.13:939,39,0	0/0:29,0:29:84.29:0,84,3075	0/0:20,0:20:60.21:0,60,2185	0/0:18,0:18:54.19:0,54,1978	0/0:35,0:35:99:0,105,3706	1/1:1,18:19:48.16:1144,48,0	0/0:20,0:20:60.21:0,60,2069	0/0:20,0:20:60.16:0,60,2026	0/0:54,0:54:99:0,154,5572	0/0:20,0:20:57.20:0,57,1992	1/1:0,13:13:33.11:722,33,0	1/1:3,14:17:20.51:480,21,0	0/0:24,0:24:72.24:0,72,2464	0/1:4,18:22:52.84:1219,0,53	0/0:19,0:19:57.15:0,57,1980	1/1:0,2:2:3.01:74,3,0
chr10	70859579	.	G	GA	5741.84	PASS	AB=0.565;AC=17;AF=0.304;AN=56;BaseQRankSum=-13.587;DP=600;FS=4.746;HRun=5;HaplotypeScore=56.4069;InbreedingCoeff=0.9341;MQ=90.02;MQ0=0;MQRankSum=-3.376;QD=34.18;ReadPosRankSum=1.905;VQSLOD=5.3481;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,37:38:99:1381,105,0	0/0:9,0:9:24.04:0,24,247	0/0:26,0:26:68.98:0,69,678	0/0:23,0:23:54.09:0,54,555	0/0:24,0:24:66.13:0,66,693	0/0:20,0:20:57.14:0,57,612	0/0:19,0:19:54.14:0,54,580	0/0:30,0:30:81.17:0,81,845	0/0:28,0:28:72.18:0,72,773	1/1:0,25:25:75.24:987,75,0	1/1:1,13:14:39.13:513,39,0	0/0:18,0:18:53.90:0,54,545	1/1:1,22:23:63.20:829,63,0	0/0:17,0:17:45.10:0,45,474	0/0:27,0:27:81.18:0,81,854	0/0:18,0:18:51.10:0,51,532	0/0:24,0:24:66.16:0,66,709	0/1:3,10:13:5.14:289,0,5	0/0:26,0:26:72.16:0,72,761	0/0:20,0:20:57.10:0,57,588	0/0:31,0:31:84.19:0,84,891	0/0:30,0:30:90.23:0,90,966	1/1:1,16:17:39.13:513,39,0	1/1:4,12:16:33.10:434,33,0	0/0:23,0:23:68.73:0,69,702	1/1:1,15:16:45.11:560,45,0	0/0:19,0:19:54.14:0,54,579	1/1:0,6:6:18.06:236,18,0
chr10	70861132	.	TGGAGGAGAAAGGA	T	1010.96	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.353;DP=734;FS=0.000;HRun=0;HaplotypeScore=271.8912;InbreedingCoeff=0.9983;MQ=89.40;MQ0=0;MQRankSum=-5.362;QD=56.16;ReadPosRankSum=1.910;VQSLOD=2.9941;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,172,10977	0/0:12,0:12:36.12:0,36,2411	0/0:36,0:35:96.78:0,97,5096	0/0:27,0:27:78.27:0,78,4567	0/0:33,0:33:99:0,99,6468	0/0:27,0:27:81.28:0,81,5224	0/0:29,0:29:84.29:0,84,5552	0/0:28,0:28:81.28:0,81,4784	0/0:23,0:23:69.24:0,69,4436	0/0:30,0:30:90.31:0,90,5299	0/0:26,0:26:75.26:0,75,4588	0/0:20,0:20:60.21:0,60,3872	0/0:26,0:26:78.27:0,78,5010	0/0:17,0:17:45.15:0,45,2389	0/0:23,0:23:69.24:0,69,4381	0/0:22,0:22:66.22:0,66,4216	0/0:22,0:22:63.22:0,63,4011	1/1:4,14:18:27.09:1105,27,0	0/0:20,0:20:60.21:0,60,3635	0/0:23,0:23:66.23:0,66,4302	0/0:39,0:39:99:0,114,7400	0/0:32,0:32:96.33:0,96,6120	0/0:27,0:27:78.25:0,78,4757	0/0:27,0:27:77.40:0,77,4738	0/0:23,0:23:69.24:0,69,4431	0/0:34,0:34:96.33:0,96,6202	0/0:22,0:22:66.21:0,66,3960	0/0:10,0:10:30.10:0,30,2008
chr10	70862558	.	A	AT	557.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.429;DP=614;FS=1.938;HRun=7;HaplotypeScore=70.9812;InbreedingCoeff=0.9961;MQ=74.71;MQ0=0;MQRankSum=-1.559;QD=25.34;ReadPosRankSum=1.357;VQSLOD=4.3694;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.14:0,87,840	0/0:20,0:20:54.09:0,54,521	0/0:12,0:12:33.02:0,33,308	0/0:10,0:10:24.03:0,24,229	0/0:24,0:24:63.06:0,63,600	0/0:31,0:31:87.14:0,87,840	0/0:24,0:24:72.10:0,72,689	0/0:27,0:27:66.05:0,66,615	0/0:18,0:18:42.06:0,42,405	0/0:29,0:29:78.12:0,78,753	0/0:27,0:27:69.08:0,69,655	0/0:24,0:24:72.12:0,72,695	0/0:20,0:20:51.07:0,51,493	0/0:23,0:23:69.09:0,69,661	0/0:17,0:17:51.08:0,51,492	0/0:21,0:21:60.10:0,60,579	0/0:32,0:32:90.08:0,90,849	1/1:3,19:22:54.17:652,54,0	0/0:22,0:22:63.09:0,63,603	0/0:26,0:26:69.06:0,69,657	0/0:18,0:18:45.05:0,45,426	0/0:23,0:23:66.09:0,66,632	0/0:20,0:20:54.02:0,54,506	0/0:11,0:11:30.05:0,30,290	0/0:25,0:25:63.03:0,63,593	0/0:28,0:28:72.10:0,72,691	0/0:18,0:18:51.07:0,51,486	0/0:10,0:10:27.04:0,27,261
chr10	70863150	.	T	TA	3049.15	PASS	AB=0.871;AC=14;AF=0.250;AN=56;BaseQRankSum=-8.766;DP=680;FS=4.028;HRun=10;HaplotypeScore=71.8437;InbreedingCoeff=0.6446;MQ=76.80;MQ0=1;MQRankSum=-1.182;QD=13.49;ReadPosRankSum=1.827;VQSLOD=3.9438;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,37:41:53.55:775,54,0	0/0:11,0:10:23.95:0,24,194	0/1:32,1:31:32.37:32,0,205	0/1:22,0:21:17.26:17,0,104	0/0:28,0:28:71.91:0,72,591	0/0:24,0:24:53.91:0,54,443	0/0:25,0:26:52.94:0,53,424	0/0:26,0:26:53.83:0,54,435	0/0:19,0:19:50.84:0,51,405	0/0:23,0:23:62.91:0,63,517	0/1:14,1:15:2.06:2,0,189	0/0:28,0:30:76.89:0,77,615	1/1:0,23:23:63.16:672,63,0	0/0:21,0:21:50.93:0,51,419	0/0:31,0:31:74.89:0,75,615	0/0:18,0:18:38.91:0,39,320	0/0:27,1:28:42.90:0,43,555	0/0:26,0:26:65.90:0,66,538	0/0:22,0:22:13.26:0,13,269	0/0:22,0:22:47.91:0,48,394	0/0:26,0:26:65.59:0,66,541	0/0:20,0:20:38.19:0,38,446	0/1:6,17:23:28.82:339,0,29	1/1:4,25:31:58.19:716,58,0	0/0:28,0:29:79.91:0,80,640	1/1:11,13:24:17.46:391,17,0	0/0:24,0:24:38.78:0,39,468	1/1:0,11:11:27.07:288,27,0
chr10	70864757	.	GTC	G	376.34	PASS	AB=0.970;AC=21;AF=0.375;AN=56;BaseQRankSum=0.504;DP=761;FS=17.412;HRun=0;HaplotypeScore=101.5071;InbreedingCoeff=-0.2283;MQ=66.18;MQ0=27;MQRankSum=0.829;QD=0.96;ReadPosRankSum=2.560;VQSLOD=0.9074;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:48,0:46:42.68:43,0,262	1/1:11,0:11:2.95:24,3,0	0/0:62,0:26:3.74:0,4,15	0/0:77,0:23:0:0,0,1	0/1:26,0:25:1.80:2,0,282	0/1:18,0:18:45.04:45,0,173	0/0:23,0:22:1.80:0,2,237	0/0:42,0:41:5.24:0,5,105	0/1:15,1:16:33.34:33,0,210	1/1:14,0:13:7.78:45,8,0	1/1:10,0:10:0.89:2,1,0	0/1:19,0:18:33.24:33,0,213	0/0:28,0:29:21.45:0,21,176	0/1:14,0:22:35.14:35,0,69	0/1:33,1:34:99:102,0,298	0/1:21,1:22:9.58:10,0,212	0/1:17,2:19:9:9,0,241	0/0:21,0:20:39.43:0,39,404	0/0:27,0:26:8.99:0,9,91	0/1:17,1:18:41.53:42,0,59	0/1:34,0:32:22.61:23,0,182	0/1:18,5:23:15.04:15,0,157	0/1:17,0:15:5.15:5,0,15	0/0:36,0:36:39.84:0,40,386	0/1:13,0:12:56.21:56,0,112	0/0:27,0:27:40.37:0,40,344	0/1:28,0:28:3.02:3,0,276	0/0:24,0:23:23.83:0,24,208
chr10	70864811	.	CAT	C	3018.96	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=11.607;DP=698;FS=8.638;HRun=0;HaplotypeScore=105.4806;InbreedingCoeff=0.8136;MQ=53.60;MQ0=18;MQRankSum=3.309;QD=11.61;ReadPosRankSum=-0.547;VQSLOD=2.7649;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:50,3:52:92.75:1011,93,0	0/0:8,0:8:3.75:0,4,173	0/0:6,0:1:3:0,3,25	0/1:17,0:12:2.53:3,0,198	0/0:29,0:28:27.25:0,27,548	0/0:18,0:18:33.82:0,34,455	0/0:24,0:22:20.60:0,21,333	0/0:56,0:55:70.87:0,71,1254	0/0:19,0:19:2.94:0,3,406	1/1:0,18:18:36.61:337,37,0	1/1:1,12:13:7.27:58,7,0	0/0:24,0:24:39.61:0,40,478	1/1:3,20:23:8.45:81,8,0	0/0:25,0:25:47.84:0,48,607	0/0:25,0:25:20.54:0,21,541	0/0:28,0:28:34.06:0,34,675	0/0:20,0:20:44.36:0,44,574	1/1:33,0:32:22.05:265,22,0	0/0:27,0:24:65.46:0,65,707	0/0:23,0:23:30.69:0,31,537	0/0:38,0:34:60.57:0,61,619	0/0:25,0:24:26.60:0,27,543	1/1:16,0:14:1.68:5,2,0	1/1:37,1:37:57.42:631,57,0	0/0:15,0:15:15.22:0,15,370	1/1:10,30:39:56.31:697,56,0	0/0:28,0:28:22.60:0,23,626	1/1:9,0:8:15.72:128,16,0
chr10	70864813	.	TACAC	T	2087.28	PASS	AB=0.910;AC=7;AF=0.125;AN=56;BaseQRankSum=6.109;DP=700;FS=7.422;HRun=0;HaplotypeScore=130.8271;InbreedingCoeff=0.2021;MQ=53.79;MQ0=20;MQRankSum=3.195;QD=12.07;ReadPosRankSum=0.131;VQSLOD=2.8030;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:48,1:48:98.36:870,0,98	0/0:8,0:8:14.64:0,15,305	0/0:12,0:4:11.99:0,12,145	0/0:16,0:12:26.69:0,27,461	0/0:29,0:28:59.88:0,60,1038	0/0:19,0:19:45.05:0,45,799	0/0:24,0:23:27.56:0,28,549	0/0:54,0:53:99:0,104,1745	0/0:17,0:18:38.84:0,39,717	0/0:19,0:19:10.02:0,10,67	0/0:12,0:12:3.90:0,4,21	0/0:22,0:22:50.84:0,51,978	1/1:23,0:23:0.25:66,0,0	0/0:25,0:25:48.12:0,48,986	0/0:25,0:25:54.15:0,54,969	0/0:30,0:30:36.52:0,37,1201	0/0:22,0:22:54.12:0,54,1076	0/0:32,0:31:26.99:0,27,820	0/0:28,0:25:53.87:0,54,1038	0/0:22,0:22:35.71:0,36,829	0/0:38,0:34:63.17:0,63,1208	0/0:25,0:24:42.14:0,42,973	0/1:4,12:14:0.04:0,0,0	0/1:38,0:37:18.03:530,0,18	0/0:15,0:15:32.60:0,33,638	0/1:38,0:37:5.01:638,0,5	0/0:29,0:30:72.71:0,73,1204	0/1:9,0:8:36.66:100,0,37
chr10	70866683	.	C	CTG	4470.08	PASS	AB=0.599;AC=14;AF=0.250;AN=56;BaseQRankSum=-6.760;DP=967;FS=0.379;HRun=0;HaplotypeScore=151.1909;InbreedingCoeff=0.7592;MQ=64.50;MQ0=8;MQRankSum=0.283;QD=19.87;ReadPosRankSum=-0.682;VQSLOD=5.0119;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,31:46:0.43:988,0,0	0/0:13,0:13:36.02:0,36,401	0/0:57,0:32:31.07:0,31,464	0/0:45,0:25:27.02:0,27,282	0/0:24,0:25:60.01:0,60,701	0/0:27,0:28:13.61:0,14,636	0/0:28,0:30:62.86:0,63,712	0/0:30,0:34:65.64:0,66,717	0/0:34,0:38:80.73:0,81,895	1/1:16,0:35:32.02:274,32,0	1/1:9,1:18:5.72:38,6,0	0/0:43,0:44:99:0,99,1172	0/1:10,18:28:53.80:656,0,54	0/0:47,0:48:99:0,114,1324	0/0:37,0:39:86.92:0,87,991	0/0:27,0:27:57.17:0,57,687	0/0:38,0:38:96.28:0,96,1144	0/0:32,0:32:78.44:0,78,1008	0/0:37,0:36:66.19:0,66,784	0/0:15,0:15:33.09:0,33,386	0/0:120,0:128:99:0,280,3327	0/0:29,0:29:54.05:0,54,651	1/1:7,8:14:18.06:288,18,0	1/1:18,24:40:40.63:1159,41,0	0/0:15,0:18:44.15:0,44,454	1/1:11,22:33:0.28:971,0,0	0/0:17,0:15:42.13:0,42,506	1/1:6,2:8:6.02:96,6,0
chr10	70866863	.	C	CTG	3716.64	PASS	AB=0.758;AC=14;AF=0.259;AN=54;BaseQRankSum=-0.038;DP=827;FS=3.843;HRun=0;HaplotypeScore=150.6802;InbreedingCoeff=0.7788;MQ=52.64;MQ0=27;MQRankSum=1.344;QD=19.56;ReadPosRankSum=0.480;VQSLOD=3.8907;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:25,14:34:58.70:873,59,0	0/0:5,0:5:9.01:0,9,99	0/0:28,0:2:5.98:0,6,56	./.	0/0:20,0:20:20.17:0,20,424	0/0:23,0:22:45.13:0,45,545	0/0:43,0:43:80.85:0,81,914	0/0:37,0:33:71.94:0,72,836	0/0:35,0:33:53.26:0,53,735	1/1:19,8:26:36.11:564,36,0	1/1:8,1:10:10.87:160,11,0	0/0:41,0:41:93.23:0,93,1100	1/1:14,5:17:26.88:406,27,0	0/0:42,0:42:67.26:0,67,1006	0/0:22,0:22:20.01:0,20,438	0/0:17,0:15:27.08:0,27,334	0/0:27,0:26:50.99:0,51,608	0/0:31,0:31:60.78:0,61,746	0/0:26,0:16:45.12:0,45,526	0/0:11,0:11:22.88:0,23,265	0/0:147,0:141:99:0,273,3191	0/0:28,0:27:39.22:0,39,714	1/1:12,2:13:15.04:206,15,0	0/1:34,15:48:15.85:740,0,16	0/0:21,0:20:40.66:0,41,466	1/1:18,8:24:42.14:664,42,0	0/0:13,0:12:15.60:0,16,254	0/1:4,2:5:8.90:105,0,9
chr10	70866897	.	TTG	T	1259.79	PASS	AB=0.798;AC=11;AF=0.212;AN=52;BaseQRankSum=6.364;DP=728;FS=5.103;HRun=0;HaplotypeScore=137.3891;InbreedingCoeff=0.7366;MQ=52.54;MQ0=17;MQRankSum=0.861;QD=9.77;ReadPosRankSum=-3.742;VQSLOD=2.1137;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,14:26:0.22:322,0,0	0/0:10,0:10:24.08:0,24,392	0/0:32,0:4:12.04:0,12,162	0/0:27,0:4:9.03:0,9,147	0/0:19,1:20:7.96:0,8,652	0/0:20,0:19:54.18:0,54,874	0/0:38,1:38:86.26:0,86,1342	0/0:41,0:36:72.23:0,72,1150	0/0:32,0:32:71.65:0,72,1144	0/1:8,3:10:0.76:119,0,1	./.	0/0:42,0:42:96.29:0,96,1481	1/1:7,9:13:23.76:277,24,0	0/0:37,0:37:85.95:0,86,1318	0/0:15,0:15:27.09:0,27,443	0/0:17,0:16:36.12:0,36,590	0/1:26,2:25:14.34:14,0,762	0/0:27,1:28:27.22:0,27,990	0/0:21,0:17:21.70:0,22,670	0/0:12,0:12:21.07:0,21,343	0/0:135,4:134:99:0,223,4556	0/0:27,1:27:68.97:0,69,1006	./.	1/1:13,17:29:16.11:378,16,0	0/0:18,0:18:39.07:0,39,610	1/1:4,3:9:20.72:200,21,0	0/0:12,0:11:24.08:0,24,393	1/1:6,0:6:12:113,12,0
chr10	70866939	.	CTG	C	371.64	PASS	AB=0.969;AC=7;AF=0.125;AN=56;BaseQRankSum=3.971;DP=887;FS=0.000;HRun=0;HaplotypeScore=158.5370;InbreedingCoeff=0.1520;MQ=50.48;MQ0=29;MQRankSum=-2.722;QD=2.14;ReadPosRankSum=0.587;VQSLOD=2.0584;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:50,2:50:24.54:25,0,1124	0/0:17,0:16:22.79:0,23,470	0/0:29,0:1:3.01:0,3,38	0/0:33,0:8:23.76:0,24,258	0/0:20,0:20:36.06:0,36,482	0/0:27,1:27:14.50:0,14,675	0/0:35,3:37:1.81:0,2,948	0/0:38,0:32:18.84:0,19,641	0/0:30,0:30:65.63:0,66,801	0/1:27,1:25:0.07:0,0,182	0/0:2,0:8:5.90:0,6,40	0/0:43,0:43:44.31:0,44,1013	0/0:29,1:28:34.96:0,35,886	0/0:33,0:33:20.89:0,21,724	0/1:15,1:15:1.03:1,0,430	0/0:23,0:22:19.31:0,19,584	0/0:38,0:37:69.40:0,69,1038	1/1:19,8:25:18.61:376,19,0	0/0:28,0:19:42.54:0,43,585	0/0:19,1:20:11.50:0,12,657	0/0:121,2:114:99:0,116,2947	0/1:36,1:36:7.09:7,0,1003	0/0:13,0:11:24.06:0,24,365	0/0:51,3:54:36.93:0,37,1480	0/0:29,0:29:0.49:0,0,812	0/0:29,0:29:44.43:0,44,943	0/1:14,0:13:79.05:79,0,300	0/0:8,0:8:18.06:0,18,292
chr10	70866956	.	TGC	T	476.10	PASS	AB=0.996;AC=11;AF=0.196;AN=56;BaseQRankSum=9.007;DP=925;FS=15.468;HRun=0;HaplotypeScore=155.2431;InbreedingCoeff=-0.0105;MQ=50.56;MQ0=28;MQRankSum=-2.190;QD=1.53;ReadPosRankSum=-0.831;VQSLOD=1.8780;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:51,0:51:14.27:14,0,1079	0/0:13,1:14:1.97:0,2,481	0/1:42,0:5:1.23:1,0,36	0/1:52,0:12:61.36:61,0,103	0/0:20,1:21:28.41:0,28,467	0/0:29,0:28:58.10:0,58,883	0/0:44,0:44:61.96:0,62,1106	0/1:43,0:37:13.77:14,0,498	0/0:27,0:27:46.89:0,47,762	0/1:26,1:26:91.35:146,0,91	0/1:11,0:11:13.31:13,0,53	0/0:36,2:38:47.11:0,47,1160	0/0:33,0:32:17.43:0,17,853	0/0:30,0:29:22.50:0,22,724	0/1:20,0:19:45.61:46,0,388	0/0:26,0:25:53.52:0,54,714	0/0:37,0:37:56.87:0,57,1177	1/1:23,0:22:31.74:296,32,0	0/0:25,0:18:26.62:0,27,401	0/0:23,0:23:39.19:0,39,758	0/0:108,0:97:99:0,160,2819	0/0:34,1:34:14:0,14,1027	0/0:15,0:14:33.93:0,34,499	0/0:65,0:63:12.51:0,13,1677	0/1:27,0:27:7.36:7,0,830	0/0:35,1:36:20.43:0,20,938	0/1:16,0:15:23.44:23,0,328	0/0:7,0:7:18.06:0,18,332
chr10	70866958	.	CGT	C	115.50	PASS	AB=0.970;AC=8;AF=0.143;AN=56;BaseQRankSum=5.224;DP=931;FS=1.964;HRun=0;HaplotypeScore=157.5051;InbreedingCoeff=0.0158;MQ=51.18;MQ0=28;MQRankSum=-0.863;QD=0.45;ReadPosRankSum=0.655;VQSLOD=2.6618;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:53,0:53:24.35:24,0,926	0/0:14,0:14:7.91:0,8,394	0/0:45,0:7:14.32:0,14,94	0/0:54,0:13:10.31:0,10,102	0/0:22,0:22:4.13:0,4,485	0/0:30,0:29:59.79:0,60,877	0/0:45,0:45:79.15:0,79,1065	0/1:44,0:38:20.23:20,0,504	0/1:27,0:27:11.11:11,0,720	0/0:29,0:28:29.70:0,30,454	0/0:10,0:11:5.26:0,5,102	0/0:38,0:38:52.38:0,52,1096	0/0:31,1:32:11.36:0,11,753	0/0:26,2:27:12.88:0,13,617	0/1:20,1:20:25.78:26,0,353	0/0:24,1:24:44.82:0,45,687	0/0:36,1:37:42.77:0,43,1110	1/1:16,0:22:5.01:89,5,0	0/0:25,0:18:21.02:0,21,269	0/0:22,0:22:41.93:0,42,627	0/0:100,2:92:99:0,116,2190	0/0:33,0:34:37.09:0,37,877	0/0:16,0:15:39.06:0,39,547	0/1:63,2:63:28.15:28,0,1487	0/1:22,3:26:48.65:49,0,673	0/0:35,1:36:3.96:0,4,894	0/0:15,1:16:24.23:0,24,368	0/0:8,0:8:21.04:0,21,310
chr10	70867303	.	G	GT	4946.04	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-11.836;DP=668;FS=5.842;HRun=9;HaplotypeScore=62.9043;InbreedingCoeff=0.9752;MQ=66.77;MQ0=0;MQRankSum=2.830;QD=26.03;ReadPosRankSum=0.889;VQSLOD=5.5025;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,30:36:55.52:846,56,0	0/0:10,0:10:26.99:0,27,234	0/0:16,0:15:17.15:0,17,171	0/0:12,0:11:8.93:0,9,144	0/0:23,0:23:59.97:0,60,521	0/0:24,0:24:62.97:0,63,547	0/0:25,1:26:38.87:0,39,562	0/0:36,0:36:92.82:0,93,792	0/0:16,0:16:47.99:0,48,416	1/1:2,26:28:72.19:797,72,0	1/1:2,15:17:39.02:412,39,0	0/0:21,0:21:47.91:0,48,405	1/1:3,24:27:63.17:697,63,0	0/0:25,0:25:56.96:0,57,494	0/0:28,0:28:45.43:0,45,616	0/0:22,0:22:59.97:0,60,517	0/0:21,0:21:56.93:0,57,482	0/0:15,0:15:41.99:0,42,365	0/0:41,0:41:99:0,102,872	0/0:31,0:31:83.96:0,84,727	0/0:30,2:32:14.01:0,14,555	0/0:24,0:24:56.96:0,57,492	1/1:2,23:26:56.99:612,57,0	1/1:1,19:21:47.19:558,47,0	0/0:33,0:33:83.95:0,84,722	1/1:1,30:31:87.17:925,87,0	0/0:21,0:21:46.01:0,46,447	1/1:1,3:4:9.02:100,9,0
chr10	70867430	.	G	GGTAC	317.69	PASS	AB=0.923;AC=5;AF=0.089;AN=56;BaseQRankSum=4.898;DP=757;FS=6.180;HRun=0;HaplotypeScore=144.9182;InbreedingCoeff=0.6146;MQ=57.56;MQ0=10;MQRankSum=-2.108;QD=7.22;ReadPosRankSum=-2.368;VQSLOD=2.1455;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,99,1670	0/0:9,0:9:21.06:0,21,348	0/0:29,0:10:24.01:0,24,330	0/0:30,0:6:4.23:0,4,173	0/0:22,0:22:60.14:0,60,1023	0/0:27,0:27:71.59:0,72,1288	0/0:39,0:39:99:0,111,2077	0/0:35,0:35:99:0,102,1549	0/0:21,0:21:54.18:0,54,981	1/1:12,1:15:23.37:311,23,0	1/1:7,6:17:1.33:61,1,0	0/0:31,0:31:90.29:0,90,1644	0/0:32,0:32:81.26:0,81,1401	0/0:33,0:33:96.28:0,96,1636	0/0:44,0:44:99:0,120,2153	0/0:42,0:42:99:0,114,2071	0/0:10,0:10:30.05:0,30,535	0/1:11,0:12:14.39:61,0,14	0/0:24,0:24:65.86:0,66,1112	0/0:23,0:22:54.12:0,54,937	0/0:71,0:71:99:0,193,3268	0/0:24,0:24:57.15:0,57,980	0/0:15,0:15:30.09:0,30,494	0/0:36,0:35:90.21:0,90,1568	0/0:19,0:19:54.09:0,54,865	0/0:21,0:21:60.42:0,60,910	0/0:25,0:25:72.16:0,72,1199	0/0:6,0:6:12.04:0,12,225
chr10	70867432	.	TAC	T	2423.91	PASS	AB=0.905;AC=24;AF=0.429;AN=56;BaseQRankSum=9.065;DP=774;FS=3.051;HRun=0;HaplotypeScore=104.4359;InbreedingCoeff=0.2321;MQ=57.08;MQ0=11;MQRankSum=0.278;QD=5.37;ReadPosRankSum=1.963;VQSLOD=2.7894;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,21:42:53.48:531,53,0	0/0:10,0:10:12.02:0,12,146	1/1:28,1:10:3.01:34,3,0	0/1:32,1:8:0.81:1,0,40	0/1:16,3:20:76.81:77,0,343	0/0:25,2:27:20.22:0,20,702	0/1:32,4:38:3.80:4,0,904	0/1:33,1:34:0.81:1,0,412	0/1:18,4:22:34.71:35,0,367	0/0:21,0:21:35.72:0,36,298	0/0:17,0:17:4.42:0,4,68	0/1:31,1:32:7.55:8,0,682	1/1:11,21:33:50.98:556,51,0	0/1:31,3:33:22.64:23,0,524	0/0:44,2:46:7.03:0,7,914	0/0:38,4:42:7.43:0,7,965	0/1:9,1:10:12.98:13,0,210	0/0:17,0:16:15.51:0,16,108	0/0:23,1:24:2.19:0,2,430	0/0:23,0:22:36.12:0,36,548	0/0:70,3:73:3.55:0,4,1436	0/0:21,2:23:33.10:0,33,484	1/1:9,6:15:9.02:102,9,0	1/1:13,23:36:19.09:612,19,0	0/1:14,4:18:62.64:63,0,415	1/1:9,12:21:36.08:390,36,0	0/1:23,2:26:19.77:20,0,524	1/1:0,6:6:12.03:136,12,0
chr10	70868118	.	GAC	G	761.40	PASS	AB=0.990;AC=14;AF=0.269;AN=52;BaseQRankSum=8.742;DP=638;FS=12.863;HRun=0;HaplotypeScore=125.1251;InbreedingCoeff=-0.1160;MQ=44.57;MQ0=44;MQRankSum=-3.174;QD=2.73;ReadPosRankSum=-0.956;VQSLOD=1.8722;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:29:10.42:76,10,0	0/1:8,0:7:18.20:18,0,48	./.	./.	0/0:19,0:16:7.28:0,7,144	0/1:25,0:20:24.39:24,0,285	0/0:27,0:24:1.74:0,2,229	0/1:36,0:33:25.28:25,0,384	0/0:28,1:23:4.55:0,5,390	1/1:25,1:21:2.15:238,2,0	0/0:11,1:12:0:0,0,0	0/0:24,0:22:19.13:0,19,694	0/1:24,0:21:39.54:40,0,70	0/0:22,1:20:1.54:0,2,323	0/0:32,0:30:59.98:0,60,596	0/0:37,0:29:19.35:0,19,639	0/0:36,0:32:20.61:0,21,557	0/1:10,0:7:24.62:38,0,25	0/1:20,0:14:5.60:6,0,147	0/1:20,1:17:12.19:12,0,306	0/0:49,0:43:17.31:0,17,583	0/0:22,0:19:21.93:0,22,310	0/1:6,0:6:30:36,0,30	0/1:37,1:30:64.28:64,0,76	0/0:17,0:15:2.32:0,2,259	0/1:32,1:29:37.15:326,0,37	0/0:30,0:27:61.73:0,62,773	0/0:2,0:1:2.84:0,3,14
chr10	70868120	.	CAGAGAGAG	C	1219.09	PASS	AB=0.980;AC=11;AF=0.212;AN=52;BaseQRankSum=3.334;DP=644;FS=4.839;HRun=0;HaplotypeScore=177.0475;InbreedingCoeff=0.5745;MQ=44.34;MQ0=44;MQRankSum=-2.311;QD=7.09;ReadPosRankSum=0.073;VQSLOD=2.5786;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:27:7.30:77,7,0	0/0:8,0:7:12.02:0,12,148	./.	./.	0/0:18,0:15:15.05:0,15,376	0/0:24,0:19:36.96:0,37,652	0/0:29,0:26:42.55:0,43,609	0/0:36,0:33:89.18:0,89,926	0/0:28,0:23:43.46:0,43,789	0/1:26,0:21:27.31:27,0,135	0/1:13,0:13:0:0,0,0	0/0:23,0:21:60.17:0,60,1287	1/1:22,1:20:3.16:234,3,0	0/0:21,0:18:45.02:0,45,1058	0/0:34,0:32:66.18:0,66,1340	0/0:37,0:29:60.15:0,60,1210	0/0:38,0:35:74.86:0,75,1363	0/0:10,0:7:5.70:0,6,66	0/0:23,0:16:44.42:0,44,762	0/0:22,0:18:38.99:0,39,612	0/0:49,0:44:74.79:0,75,1408	0/0:22,0:18:35.84:0,36,677	1/1:6,0:6:8.86:112,9,0	1/1:41,1:34:8.40:246,8,0	0/0:17,0:15:27.08:0,27,728	0/1:30,2:27:99:665,0,108	0/0:30,0:26:74.20:0,74,1473	0/0:2,0:1:2.68:0,3,11
chr10	70868154	.	GAC	G	201.81	PASS	AB=0.979;AC=5;AF=0.096;AN=52;BaseQRankSum=6.462;DP=684;FS=1.932;HRun=0;HaplotypeScore=128.8447;InbreedingCoeff=0.1782;MQ=44.31;MQ0=56;MQRankSum=-3.703;QD=2.55;ReadPosRankSum=-2.861;VQSLOD=1.9522;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:39:14.72:0,15,222	0/0:8,0:7:21:0,21,292	./.	./.	0/0:22,0:17:30.03:0,30,480	0/0:24,0:17:30.08:0,30,502	0/0:37,0:33:54.17:0,54,980	0/0:31,0:29:80.96:0,81,1295	0/0:28,0:23:51.06:0,51,842	0/1:28,2:23:82.87:269,0,83	1/1:12,1:11:2.90:16,3,0	0/0:18,0:16:45.08:0,45,834	0/1:18,0:15:5.29:5,0,134	0/0:18,0:16:33.05:0,33,591	0/0:33,0:31:54.14:0,54,983	0/0:30,0:24:21.11:0,21,538	0/0:43,0:38:95.15:0,95,1593	0/1:18,0:15:12.68:13,0,178	0/0:25,0:15:45.05:0,45,664	0/0:20,0:15:36.09:0,36,576	0/0:57,0:51:92.38:0,92,1507	0/0:27,0:21:48.12:0,48,844	0/0:11,0:10:5.93:0,6,116	0/0:44,0:36:5.53:0,6,125	0/0:26,0:21:45.01:0,45,588	0/0:29,1:25:18.25:0,18,946	0/0:28,0:24:63.17:0,63,1088	0/0:3,0:2:6.02:0,6,114
chr10	70868178	.	CAG	C	491.25	PASS	AB=0.867;AC=5;AF=0.089;AN=56;BaseQRankSum=5.776;DP=756;FS=14.439;HRun=0;HaplotypeScore=131.4963;InbreedingCoeff=0.2648;MQ=49.29;MQ0=45;MQRankSum=-0.343;QD=4.43;ReadPosRankSum=-2.125;VQSLOD=1.3697;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:42:11.96:0,12,220	0/0:13,0:12:30.10:0,30,547	0/1:29,0:9:8.92:9,0,240	0/1:35,1:18:1.07:1,0,352	0/0:22,0:20:41.83:0,42,765	0/0:22,0:16:29.17:0,29,534	0/0:28,0:26:54.18:0,54,969	0/0:29,0:27:78.15:0,78,1258	0/0:35,0:31:60.20:0,60,1074	0/1:14,13:21:99:500,0,124	1/1:15,1:14:5.85:83,6,0	0/0:19,0:18:45.02:0,45,822	0/0:22,0:20:8.99:0,9,102	0/0:13,0:12:21.07:0,21,355	0/0:30,0:28:51.15:0,51,895	0/0:33,0:27:45.15:0,45,818	0/0:37,0:32:86.29:0,86,1505	0/0:19,0:16:30.88:0,31,415	0/0:22,0:12:33.11:0,33,594	0/0:20,0:15:36.12:0,36,658	0/0:52,0:48:99:0,99,1801	0/0:25,0:23:63.22:0,63,1130	0/0:19,0:18:5.93:0,6,110	0/0:44,0:36:5.99:0,6,110	0/0:27,0:22:30.01:0,30,471	0/0:30,1:27:31.21:0,31,965	0/0:30,0:27:72.23:0,72,1253	0/0:8,0:8:24.08:0,24,328
chr10	70868190	.	CAGACAG	C	1449.56	PASS	AB=0.701;AC=7;AF=0.125;AN=56;BaseQRankSum=6.643;DP=806;FS=0.646;HRun=0;HaplotypeScore=176.1644;InbreedingCoeff=0.4870;MQ=57.47;MQ0=26;MQRankSum=0.079;QD=9.86;ReadPosRankSum=-0.969;VQSLOD=2.5103;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,32:43:2.92:0,3,54	0/0:13,0:12:30.08:0,30,665	0/0:50,0:21:13.13:0,13,612	0/1:62,0:31:55.07:55,0,437	0/0:25,0:24:51.17:0,51,1169	0/0:21,0:17:17.95:0,18,674	0/0:29,0:28:54.18:0,54,1226	0/0:27,0:25:57.19:0,57,1035	0/0:33,0:30:57.15:0,57,1442	0/0:26,0:23:51.64:0,52,1060	0/0:18,0:15:12.04:0,12,199	0/0:21,0:21:38.87:0,39,996	1/1:5,21:24:2.53:65,3,0	0/0:12,0:12:15.05:0,15,453	0/0:28,0:27:42.13:0,42,902	0/0:36,0:30:51.04:0,51,1020	0/0:38,0:36:84.10:0,84,2180	0/0:22,0:19:17.57:0,18,420	0/0:18,0:12:27.09:0,27,529	0/0:18,0:14:27.07:0,27,545	0/0:52,0:49:87.30:0,87,2248	0/0:29,0:27:60.21:0,60,1485	0/1:2,18:20:0.02:0,0,0	0/0:17,29:40:0:0,0,0	0/0:25,0:23:21.12:0,21,533	0/1:8,18:23:99:889,0,101	0/0:29,0:27:63.21:0,63,1464	1/1:12,0:12:19.64:564,20,0
chr10	70868533	.	CAG	C	1065.70	PASS	AB=0.692;AC=25;AF=0.893;AN=28;BaseQRankSum=-1.733;DP=266;FS=0.000;HRun=0;HaplotypeScore=22.2512;InbreedingCoeff=-0.0054;MQ=21.11;MQ0=163;MQRankSum=1.494;QD=7.01;ReadPosRankSum=1.016;VQSLOD=2.0614;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	0/0:43,1:1:0.47:0,0,1	./.	1/1:12,3:3:9.03:126,9,0	./.	./.	1/1:13,5:7:11.91:167,12,0	1/1:5,4:4:6.02:84,6,0	1/1:9,5:6:2.99:42,3,0	./.	1/1:5,3:3:6.02:84,6,0	1/1:16,11:12:12:168,12,0	1/1:10,3:3:6.02:84,6,0	./.	1/1:3,1:1:3.01:42,3,0	./.	1/1:6,1:1:3.01:42,3,0	./.	0/1:10,8:10:35.62:75,0,36	./.	1/1:7,0:2:3:25,3,0	1/1:6,5:6:12.04:168,12,0	1/1:0,1:1:3.01:42,3,0
chr10	70868881	.	ACTCT	A	2322.17	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=4.370;DP=557;FS=1.884;HRun=0;HaplotypeScore=94.9191;InbreedingCoeff=0.8765;MQ=76.35;MQ0=29;MQRankSum=0.859;QD=15.80;ReadPosRankSum=0.340;VQSLOD=3.4437;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:25:54.16:816,54,0	0/0:7,0:5:12.04:0,12,189	0/0:51,0:29:63.03:0,63,1056	0/0:50,0:29:68.92:0,69,1279	0/0:11,0:11:27.09:0,27,432	0/0:10,0:9:27.09:0,27,442	0/0:24,0:24:66.22:0,66,1110	0/0:16,0:13:36.11:0,36,619	0/0:17,0:17:33.96:0,34,486	1/1:2,0:16:40.01:541,40,0	0/1:9,0:8:0:0,0,0	0/0:23,0:23:53.37:0,53,807	1/1:16,0:16:2.59:52,3,0	0/0:17,0:17:33.11:0,33,537	0/0:16,0:15:28.90:0,29,419	0/0:22,0:22:51.17:0,51,872	0/0:21,0:21:53.77:0,54,838	1/1:11,0:11:27.05:365,27,0	0/0:8,0:7:18.06:0,18,321	0/0:9,0:9:27.05:0,27,418	0/0:61,0:57:99:0,135,2075	0/0:10,0:10:12.04:0,12,195	./.	1/1:43,0:40:2.65:39,3,0	0/0:16,0:16:24.06:0,24,382	1/1:4,13:15:36.11:541,36,0	0/0:17,0:17:42.14:0,42,693	1/1:7,0:6:9.03:145,9,0
chr10	70868883	.	TCTCTCTCACACACACACACA	T	1334.76	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=7.350;DP=562;FS=3.922;HRun=0;HaplotypeScore=229.4185;InbreedingCoeff=0.4836;MQ=71.49;MQ0=31;MQRankSum=1.391;QD=10.27;ReadPosRankSum=1.756;VQSLOD=2.6757;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:24:99:251,0,287	0/0:8,0:6:15.05:0,15,685	0/0:47,0:25:72.14:0,72,1652	0/0:48,0:27:72.24:0,72,1931	0/0:11,0:11:27.09:0,27,975	0/0:10,0:9:27.09:0,27,1019	0/0:24,0:24:66.23:0,66,1981	0/0:18,0:15:42.14:0,42,1033	0/0:17,0:17:42.12:0,42,1454	1/1:16,0:16:39.61:843,40,0	1/1:0,9:8:3.01:68,3,0	0/0:26,0:26:58.42:0,58,1698	0/0:15,0:15:3.12:0,3,137	0/0:17,0:17:34:0,34,926	0/0:16,0:15:33.10:0,33,1033	0/0:23,0:23:54.19:0,54,1936	0/0:21,0:21:54.19:0,54,2301	1/1:11,0:11:3.37:141,3,0	0/0:9,0:8:21.07:0,21,761	0/0:9,0:9:26.30:0,26,930	0/0:63,0:59:99:0,144,5060	0/0:12,0:11:14.43:0,14,455	0/0:4,0:3:0:0,0,0	1/1:43,0:40:3.44:21,3,0	0/0:18,0:17:27.08:0,27,798	0/1:16,0:14:99:144,0,167	0/0:16,0:16:48.12:0,48,1347	0/1:8,0:7:15.30:15,0,96
chr10	70868885	.	TCTCTCACA	T	2296.41	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=4.338;DP=567;FS=1.165;HRun=0;HaplotypeScore=126.6943;InbreedingCoeff=0.8608;MQ=67.11;MQ0=31;MQRankSum=2.346;QD=15.84;ReadPosRankSum=0.324;VQSLOD=2.9739;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:24:54.16:816,54,0	0/0:8,0:6:15.05:0,15,302	0/0:44,0:22:63.03:0,63,1056	0/0:46,0:25:68.92:0,69,1279	0/0:11,0:11:27.09:0,27,481	0/0:10,0:9:27.09:0,27,487	0/0:26,0:26:67.11:0,67,1132	0/0:20,0:17:42.07:0,42,662	0/0:17,0:17:36.12:0,36,593	1/1:15,0:15:39.59:540,40,0	0/1:10,0:9:0:0,0,0	0/0:25,0:25:54.63:0,55,859	1/1:0,0:15:2.77:26,3,0	0/0:18,0:17:34.36:0,34,539	0/0:17,0:16:29.77:0,30,448	0/0:24,0:24:54.18:0,54,1064	0/0:22,0:22:51.09:0,51,1023	1/1:10,0:10:27.01:365,27,0	0/0:8,0:7:20.43:0,20,329	0/0:10,0:10:27.05:0,27,474	0/0:64,0:60:99:0,135,2364	0/0:13,0:12:11.79:0,12,214	0/0:4,0:3:0:0,0,0	1/1:7,38:43:3.48:40,3,0	0/0:19,0:18:26.60:0,27,506	1/1:15,0:13:36.11:541,36,0	0/0:16,0:16:45.15:0,45,786	1/1:7,0:5:9.03:145,9,0
chr10	70868889	.	TCACACA	T	470.54	PASS	AB=1.000;AC=17;AF=0.386;AN=44;BaseQRankSum=1.252;DP=596;FS=28.011;HRun=0;HaplotypeScore=122.2838;InbreedingCoeff=0.2882;MQ=62.08;MQ0=40;MQRankSum=1.128;QD=1.79;ReadPosRankSum=-2.742;VQSLOD=0.2885;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:30:0.47:0,0,1	0/0:8,0:6:5.99:0,6,68	./.	./.	0/0:13,0:12:6.02:0,6,114	1/1:11,0:10:6:81,6,0	0/0:29,0:29:0.89:0,1,2	./.	1/1:19,0:18:12.38:155,12,0	./.	0/0:11,0:9:0:0,0,0	1/1:18,0:21:0.19:1,0,0	0/1:16,0:16:27.56:28,0,66	1/1:23,0:22:11.96:153,12,0	1/1:10,7:17:4.83:64,5,0	0/0:22,0:25:9.97:0,10,218	0/1:26,0:24:86.40:86,0,137	./.	0/0:8,0:7:0:0,0,0	0/0:11,0:11:6:0,6,65	0/1:69,0:63:16.98:17,0,161	1/1:9,3:11:0.47:1,0,0	0/0:6,0:4:0:0,0,0	1/1:48,0:45:0.47:1,0,0	0/0:17,0:16:5.25:0,5,169	0/0:16,0:14:0:0,0,0	0/0:15,0:15:3.01:0,3,52	./.
chr10	70869524	.	TAGA	T	876.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.164;DP=734;FS=1.896;HRun=0;HaplotypeScore=97.2848;InbreedingCoeff=1.0000;MQ=85.62;MQ0=0;MQRankSum=-1.523;QD=38.13;ReadPosRankSum=1.698;VQSLOD=4.7482;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,157,3589	0/0:18,0:18:54.17:0,54,1202	0/0:27,0:27:75.25:0,75,1577	0/0:19,0:19:50.85:0,51,1113	0/0:23,0:23:66.21:0,66,1474	0/0:26,0:26:78.27:0,78,1777	0/0:25,0:25:72.25:0,72,1603	0/0:25,0:25:69.24:0,69,1564	0/0:23,0:23:66.21:0,66,1475	0/0:18,0:18:48.16:0,48,1075	0/0:25,0:25:75.26:0,75,1711	0/0:27,0:27:78.27:0,78,1796	0/0:21,0:21:60.21:0,60,1383	0/0:31,0:31:93.32:0,93,2126	0/0:19,0:19:57.20:0,57,1312	0/0:23,0:23:69.21:0,69,1501	0/0:42,0:41:99:0,123,2765	1/1:2,21:23:57.20:972,57,0	0/0:26,0:26:75.25:0,75,1672	0/0:25,0:25:72.25:0,72,1642	0/0:34,0:34:99:0,99,2168	0/0:32,0:32:96.33:0,96,2211	0/0:22,0:22:66.23:0,66,1522	0/0:24,0:24:72.25:0,72,1641	0/0:24,0:22:69.24:0,69,1591	0/0:29,0:29:72.25:0,72,1646	0/0:32,0:32:96.33:0,96,2174	0/0:19,0:19:48.16:0,48,1105
chr10	70870243	.	CGA	C	1196.69	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.518;DP=700;FS=3.215;HRun=0;HaplotypeScore=85.0015;InbreedingCoeff=0.9984;MQ=81.20;MQ0=0;MQRankSum=0.207;QD=35.20;ReadPosRankSum=-0.186;VQSLOD=5.4304;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,2068	0/0:9,0:9:27.09:0,27,505	0/0:18,0:18:54.17:0,54,935	0/0:33,0:33:88.44:0,88,1450	0/0:16,0:16:48.15:0,48,860	0/0:22,0:22:66.23:0,66,1208	0/0:33,0:33:93.29:0,93,1650	0/0:34,0:34:99:0,99,1717	0/0:31,0:31:90.31:0,90,1685	1/1:2,21:23:66.21:951,66,0	1/1:0,11:11:29.96:368,30,0	0/0:32,0:32:96.29:0,96,1726	0/0:23,0:23:69.24:0,69,1291	0/0:28,0:28:81.25:0,81,1452	0/0:30,0:30:81.28:0,81,1517	0/0:31,0:31:87.28:0,87,1586	0/0:32,0:31:93.30:0,93,1684	0/0:31,0:31:93.28:0,93,1675	0/0:21,0:21:60.20:0,60,1080	0/0:13,0:13:36.12:0,36,663	0/0:32,0:32:96.32:0,96,1766	0/0:17,0:17:51.16:0,51,914	0/0:10,0:10:27.08:0,27,474	0/0:36,0:36:99:0,105,1945	0/0:11,0:11:33.10:0,33,586	0/0:27,1:28:38.33:0,38,1277	0/0:39,0:39:99:0,117,2132	0/0:15,0:14:39.13:0,39,729
chr10	70872614	.	ATGTGTGTGTG	A	585.18	PASS	AB=0.869;AC=9;AF=0.180;AN=50;BaseQRankSum=1.582;DP=578;FS=4.506;HRun=0;HaplotypeScore=169.8925;InbreedingCoeff=0.5363;MQ=73.02;MQ0=11;MQRankSum=-1.732;QD=5.63;ReadPosRankSum=-0.591;VQSLOD=2.4237;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:5:6.02:0,6,180	./.	./.	0/0:11,0:12:15.05:0,15,362	0/0:15,0:15:15.05:0,15,399	0/0:26,0:25:21.52:0,22,390	0/0:22,0:22:21.90:0,22,337	0/0:19,0:17:21.93:0,22,488	0/0:29,0:29:31.65:0,32,997	0/0:13,0:13:6.01:0,6,125	0/0:24,0:24:35.22:0,35,1010	0/1:15,0:17:77.39:353,0,77	0/0:17,0:17:30.09:0,30,622	0/0:26,0:27:39.06:0,39,893	0/0:18,0:18:18:0,18,568	0/0:22,0:22:33.07:0,33,882	0/0:19,0:19:21.07:0,21,705	0/0:17,0:16:13.40:0,13,343	0/1:15,0:15:3.16:3,0,334	0/0:34,0:32:18.06:0,18,502	0/0:15,0:14:6.02:0,6,253	1/1:12,1:14:6.02:120,6,0	0/1:16,8:23:0:0,0,0	0/0:24,0:24:19.68:0,20,684	1/1:26,0:25:12.02:181,12,0	0/0:20,0:20:24.06:0,24,449	1/1:4,0:6:3.01:53,3,0
chr10	70872694	.	G	GAT	409.79	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.543;DP=639;FS=1.713;HRun=0;HaplotypeScore=119.3950;InbreedingCoeff=0.9886;MQ=78.83;MQ0=12;MQRankSum=-0.311;QD=11.08;ReadPosRankSum=-2.787;VQSLOD=2.9028;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:75.13:0,75,979	0/0:13,0:13:30.71:0,31,389	0/0:43,0:27:69.08:0,69,788	0/0:60,0:39:30.11:0,30,864	0/0:13,0:12:32.72:0,33,479	0/0:18,0:18:51.17:0,51,737	0/0:19,0:18:51.10:0,51,702	0/0:27,0:27:75.22:0,75,1023	0/0:25,0:24:66.21:0,66,929	1/1:10,14:22:41.04:310,41,0	1/1:13,0:11:20.99:220,21,0	0/0:24,0:24:66.22:0,66,966	0/0:18,0:18:48.08:0,48,590	0/0:17,0:17:39.09:0,39,510	0/0:24,0:24:66.18:0,66,895	0/0:20,0:20:53.65:0,54,734	0/0:20,0:20:51.11:0,51,704	0/0:18,0:18:17.95:0,18,173	0/0:17,0:16:42.11:0,42,548	0/0:21,0:21:54.14:0,54,724	0/0:37,0:36:92.56:0,93,1251	0/0:13,0:13:33.11:0,33,477	0/0:20,0:19:38.88:0,39,533	0/0:32,0:32:71.56:0,72,914	0/0:15,0:15:38.85:0,39,517	0/0:23,0:22:36.04:0,36,803	0/0:21,0:21:60.17:0,60,825	0/0:7,0:7:18.06:0,18,261
chr10	70873506	.	CA	C	718.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.448;DP=797;FS=1.648;HRun=2;HaplotypeScore=74.6771;InbreedingCoeff=0.9971;MQ=70.08;MQ0=0;MQRankSum=0.140;QD=29.94;ReadPosRankSum=2.480;VQSLOD=3.4295;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:99:0,132,1912	0/0:14,0:14:42.14:0,42,624	0/0:22,0:22:29.24:0,29,777	0/0:13,0:13:33.11:0,33,484	0/0:23,0:23:69.21:0,69,990	0/0:30,0:30:87.28:0,87,1279	0/0:35,0:35:99:0,105,1574	0/0:31,0:31:93.29:0,93,1331	0/0:30,0:30:87.27:0,87,1264	0/0:31,0:31:93.31:0,93,1377	0/0:19,0:19:57.18:0,57,835	0/0:36,0:36:99:0,108,1619	0/0:34,0:34:99:0,102,1511	0/0:33,0:33:99:0,99,1439	0/0:31,0:31:93.31:0,93,1392	0/0:37,0:37:99:0,111,1654	0/0:33,0:33:99:0,99,1463	1/1:1,23:24:24.36:812,24,0	0/0:16,0:16:48.11:0,48,666	0/0:30,0:30:90.29:0,90,1318	0/0:58,0:58:99:0,172,2464	0/0:21,0:21:63.19:0,63,884	0/0:22,0:22:66.20:0,66,949	0/0:35,0:35:99:0,105,1527	0/0:23,0:23:69.22:0,69,1010	0/0:27,0:27:78.26:0,78,1164	0/0:30,0:30:90.28:0,90,1306	0/0:13,0:13:39.13:0,39,582
chr10	70873611	.	G	GT	1762.48	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.793;DP=771;FS=3.154;HRun=7;HaplotypeScore=73.3586;InbreedingCoeff=0.9909;MQ=73.48;MQ0=0;MQRankSum=-1.064;QD=26.31;ReadPosRankSum=-0.325;VQSLOD=4.2304;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,956	0/0:17,0:17:45.07:0,45,435	0/0:25,0:24:56.99:0,57,521	0/0:15,0:15:14.54:0,15,203	0/0:33,0:33:93.14:0,93,897	0/0:18,0:18:45.07:0,45,434	0/0:19,0:19:51.07:0,51,493	0/0:25,0:25:66.09:0,66,632	0/0:27,0:27:54.82:0,55,641	0/0:40,0:40:99:0,108,1039	0/0:26,0:26:66.07:0,66,627	0/0:30,0:30:90.15:0,90,869	0/0:32,0:32:90.12:0,90,864	0/0:26,0:26:72.11:0,72,695	0/0:49,0:49:99:0,138,1327	0/0:28,0:28:78.13:0,78,753	0/0:23,0:23:57.07:0,57,550	0/0:16,0:16:48.08:0,48,463	0/0:27,0:27:63.09:0,63,608	1/1:4,30:34:75.23:906,75,0	0/0:34,0:34:99:0,99,956	0/0:37,0:37:99:0,102,978	0/0:23,0:23:57.09:0,57,550	0/0:22,0:22:57.09:0,57,550	0/0:31,0:31:90.14:0,90,869	0/0:30,0:30:81.13:0,81,782	1/1:2,31:32:81.25:978,81,0	0/0:14,0:14:39.06:0,39,377
chr10	70875522	.	TTG	T	2159.46	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=12.006;DP=598;FS=0.881;HRun=0;HaplotypeScore=79.0072;InbreedingCoeff=0.9089;MQ=52.47;MQ0=20;MQRankSum=-7.024;QD=16.61;ReadPosRankSum=-3.234;VQSLOD=3.0486;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,10:22:54.11:600,54,0	0/0:11,0:11:26.44:0,26,365	0/0:44,0:10:10.44:0,10,242	0/1:32,0:9:3.55:4,0,52	0/0:20,0:20:28.31:0,28,588	0/0:15,0:15:30.01:0,30,457	0/0:22,0:22:53.21:0,53,842	0/0:32,0:31:30.40:0,30,872	0/0:15,0:15:33.12:0,33,416	0/0:31,0:29:80.76:0,81,1234	0/0:15,0:15:37.37:0,37,545	0/0:16,0:16:37.03:0,37,351	1/1:2,12:14:11.61:118,12,0	0/0:25,0:25:40.13:0,40,764	0/0:33,0:33:76.35:0,76,1079	0/0:19,0:19:42.14:0,42,578	0/0:36,0:35:72.67:0,73,1154	0/0:17,0:16:27.02:0,27,402	0/0:17,0:16:48.11:0,48,662	0/0:30,0:30:45.39:0,45,1008	0/0:9,0:8:21.06:0,21,347	0/0:15,0:15:36.03:0,36,535	1/1:6,9:15:41.77:464,42,0	1/1:1,10:11:14.84:184,15,0	0/0:22,0:22:55.17:0,55,840	1/1:14,9:23:65.97:740,66,0	0/0:24,0:23:31.74:0,32,724	1/1:12,0:11:23.88:235,24,0
chr10	70875523	.	TG	T	1507.48	PASS	AB=0.972;AC=14;AF=0.250;AN=56;BaseQRankSum=13.321;DP=600;FS=10.097;HRun=1;HaplotypeScore=71.9236;InbreedingCoeff=0.7836;MQ=51.30;MQ0=21;MQRankSum=-8.521;QD=10.25;ReadPosRankSum=-3.501;VQSLOD=-0.3974;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,1:22:54.12:411,54,0	0/0:11,0:11:16.49:0,16,258	0/0:45,0:10:10.40:0,10,196	0/1:33,0:8:17.26:32,0,17	0/0:20,0:20:23.14:0,23,444	0/0:15,0:15:29.99:0,30,351	0/0:22,0:22:51.65:0,52,649	0/0:32,0:31:10.06:0,10,667	0/0:15,0:15:15.47:0,15,293	0/0:31,0:29:72.75:0,73,932	0/0:14,1:15:31.75:0,32,385	0/1:16,1:17:10.18:10,0,211	1/1:13,1:14:11.94:100,12,0	0/0:25,0:25:36.33:0,36,590	0/0:33,0:33:52.50:0,53,790	0/0:18,0:18:38.76:0,39,448	0/0:37,0:35:72.77:0,73,908	0/0:17,0:16:27.01:0,27,326	0/0:17,0:16:48.09:0,48,541	0/0:30,0:30:21.51:0,22,771	0/0:9,0:8:21.05:0,21,271	0/0:15,0:15:35.51:0,36,400	1/1:13,2:15:41.79:338,42,0	1/1:10,1:11:14.94:130,15,0	0/0:21,1:22:47.75:0,48,626	1/1:22,1:23:63.96:504,64,0	0/0:24,0:23:12.68:0,13,520	1/1:12,0:11:23.82:170,24,0
chr10	70876898	.	AAG	A	10938.27	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=19.590;DP=865;FS=6.527;HRun=0;HaplotypeScore=124.7714;InbreedingCoeff=0.9993;MQ=80.22;MQ0=1;MQRankSum=-9.324;QD=38.93;ReadPosRankSum=4.577;VQSLOD=6.7552;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,54:55:99:2121,144,0	0/0:13,0:13:39.13:0,39,724	0/0:27,0:27:78.27:0,78,1442	0/0:21,0:21:54.18:0,54,945	0/0:26,0:26:75.26:0,75,1403	0/0:23,0:22:69.21:0,69,1218	0/0:27,0:27:81.28:0,81,1496	0/0:24,0:24:69.23:0,69,1258	0/0:30,0:30:90.29:0,90,1654	1/1:0,48:48:99:2115,144,0	1/1:2,19:20:48.16:707,48,0	0/0:34,0:34:99:0,102,1891	1/1:2,37:39:99:1458,99,0	0/0:35,0:35:99:0,102,1903	0/0:49,0:49:99:0,144,2691	0/0:30,0:30:87.30:0,87,1623	0/0:43,0:42:99:0,126,2350	0/0:19,0:19:54.17:0,54,979	0/0:26,0:26:75.26:0,75,1404	0/0:24,0:24:66.23:0,66,1236	0/0:42,0:42:99:0,123,2254	0/0:34,0:34:99:0,99,1841	1/1:1,26:27:75.25:1105,75,0	1/1:2,45:47:70.69:1756,71,0	0/0:22,0:22:66.23:0,66,1236	1/1:3,33:36:93.31:1369,93,0	0/0:35,0:35:99:0,102,1869	1/1:0,8:8:21.07:309,21,0
chr10	70878452	.	G	GATC	9277.19	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-4.062;DP=603;FS=0.369;HRun=0;HaplotypeScore=94.4036;InbreedingCoeff=0.9754;MQ=86.28;MQ0=0;MQRankSum=-2.641;QD=50.97;ReadPosRankSum=4.998;VQSLOD=7.0750;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,24:30:51.17:1155,51,0	0/0:6,0:6:12.04:0,12,200	0/0:26,0:26:75.21:0,75,1174	0/0:24,0:24:64.45:0,64,995	0/0:6,0:6:15.05:0,15,250	0/0:17,0:17:45.15:0,45,739	0/0:26,0:26:72.22:0,72,1155	0/0:20,0:20:54.18:0,54,895	0/0:35,0:35:99:0,102,1672	1/1:4,13:18:48.16:1052,48,0	1/1:6,3:10:5.96:135,6,0	0/0:33,0:33:99:0,99,1620	1/1:2,24:26:71.83:1568,72,0	0/0:24,0:24:69.24:0,69,1143	0/0:24,0:24:69.21:0,69,1075	0/0:26,0:25:75.26:0,75,1249	0/0:38,0:38:99:0,111,1822	1/1:2,27:29:72.25:1630,72,0	0/0:19,0:19:57.17:0,57,877	0/0:12,0:12:33.11:0,33,549	0/0:37,0:37:90.29:0,90,1474	0/0:12,0:12:36.12:0,36,599	1/1:3,12:15:27.09:611,27,0	1/1:0,30:30:81.28:1835,81,0	0/0:12,0:12:33.11:0,33,536	1/1:3,12:16:33.11:747,33,0	0/0:24,0:24:72.23:0,72,1159	1/1:0,8:8:24.08:544,24,0
chr10	70878938	.	G	GA	1893.45	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.306;DP=705;FS=4.636;HRun=7;HaplotypeScore=96.8901;InbreedingCoeff=0.8904;MQ=71.67;MQ0=1;MQRankSum=0.198;QD=27.44;ReadPosRankSum=-1.360;VQSLOD=3.3003;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,1253	0/0:16,0:16:45.04:0,45,427	0/0:19,0:18:3.80:0,4,234	0/0:20,0:15:32:0,32,251	0/0:25,0:25:69.11:0,69,666	0/0:34,0:34:99:0,99,956	0/0:26,0:26:66.08:0,66,631	0/0:20,0:20:48.06:0,48,459	0/0:24,0:24:66.10:0,66,637	1/1:5,16:21:54.11:634,54,0	1/1:0,20:20:60.14:705,60,0	0/0:27,0:27:75.09:0,75,716	0/0:29,0:29:84.12:0,84,805	0/0:23,0:23:60.08:0,60,574	0/0:25,0:25:66.10:0,66,637	0/0:35,0:35:99:0,99,956	0/0:23,0:23:63.10:0,63,608	1/1:5,23:28:34.21:696,34,0	0/0:15,0:15:2.82:0,3,311	0/0:21,0:21:54.08:0,54,521	0/0:12,0:12:30.04:0,30,284	0/0:31,0:31:90.14:0,90,869	0/0:24,0:24:66.11:0,66,637	0/0:30,0:30:72.08:0,72,684	0/0:30,0:30:87.14:0,87,840	0/0:31,0:31:78.11:0,78,753	0/0:39,0:39:99:0,111,1072	0/0:9,0:9:27.04:0,27,261
chr10	70879498	.	T	TCAAA	5035.01	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-0.347;DP=246;FS=3.511;HRun=0;HaplotypeScore=42.8455;InbreedingCoeff=0.8976;MQ=104.61;MQ0=0;MQRankSum=-7.315;QD=61.40;ReadPosRankSum=1.978;VQSLOD=5.7333;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:20:39.13:1023,39,0	0/0:2,0:2:6.02:0,6,112	0/0:19,0:19:54.05:0,54,921	0/0:17,0:17:48.15:0,48,871	0/0:9,0:9:27.09:0,27,506	0/0:6,0:6:15.04:0,15,253	0/0:14,0:14:39.13:0,39,740	0/0:12,0:12:33.11:0,33,627	0/0:7,0:7:21.07:0,21,398	1/1:3,8:11:33.11:850,33,0	1/1:1,2:3:9.03:213,9,0	0/0:6,0:6:15.05:0,15,284	1/1:2,8:10:27.09:718,27,0	0/0:4,0:4:12.04:0,12,228	0/0:8,0:8:21.07:0,21,399	0/0:5,0:5:15.05:0,15,285	0/0:11,0:11:33.09:0,33,592	1/1:2,6:8:12.04:324,12,0	0/0:11,0:11:33.11:0,33,625	0/0:6,0:6:9.03:0,9,171	0/0:13,0:13:39.13:0,39,740	0/0:7,0:7:21.07:0,21,399	1/1:1,9:10:27.09:698,27,0	1/1:1,13:14:30.07:749,30,0	0/0:2,0:2:6.02:0,6,114	1/1:1,4:5:15.05:379,15,0	0/0:5,0:5:15.05:0,15,277	1/1:0,1:1:3.01:81,3,0
chr10	70880128	.	TAG	T	1399.27	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.870;DP=324;FS=3.925;HRun=0;HaplotypeScore=42.8174;InbreedingCoeff=0.9514;MQ=87.56;MQ0=0;MQRankSum=-2.085;QD=39.98;ReadPosRankSum=-0.138;VQSLOD=5.1786;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.33:0,96,1787	0/0:4,0:4:12.04:0,12,215	0/0:16,0:16:34.76:0,35,760	0/0:17,0:17:28.09:0,28,730	0/0:11,0:11:33.11:0,33,618	0/0:10,0:10:30.10:0,30,562	0/0:15,0:15:45.15:0,45,825	0/0:16,0:16:48.16:0,48,877	0/0:9,0:9:27.09:0,27,506	1/1:0,12:12:36.12:529,36,0	1/1:0,5:5:15.05:221,15,0	0/0:7,0:7:21.07:0,21,392	0/0:3,0:3:9.03:0,9,160	0/0:10,0:10:27.09:0,27,505	0/0:9,0:9:27.09:0,27,506	0/0:10,0:10:30.10:0,30,562	0/0:14,0:14:33.11:0,33,618	1/1:0,18:18:54.18:790,54,0	0/0:6,0:6:18.06:0,18,337	0/0:10,0:10:30.10:0,30,555	0/0:24,0:24:72.25:0,72,1336	0/0:7,0:7:21.07:0,21,386	0/0:10,0:10:24.08:0,24,416	0/0:9,0:9:27.09:0,27,505	0/0:8,0:8:24.08:0,24,449	0/0:17,1:17:45.15:0,45,836	0/0:7,0:7:21.07:0,21,382	0/0:7,0:7:21.07:0,21,393
chr10	70880367	.	CG	C	3643.62	PASS	AB=0.667;AC=17;AF=0.304;AN=56;BaseQRankSum=8.922;DP=468;FS=1.339;HRun=6;HaplotypeScore=54.8782;InbreedingCoeff=0.8681;MQ=80.64;MQ0=0;MQRankSum=-0.761;QD=21.95;ReadPosRankSum=4.996;VQSLOD=2.8261;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,20:32:54.12:579,54,0	0/0:4,0:4:12.04:0,12,158	0/0:15,0:14:34.62:0,35,394	0/0:14,0:14:24.07:0,24,302	0/0:14,0:14:27.07:0,27,340	0/0:9,0:9:24.06:0,24,300	0/0:29,0:28:78.22:0,78,996	0/0:31,0:31:63.67:0,64,816	0/0:16,0:16:42.12:0,42,525	1/1:2,6:8:21.05:220,21,0	0/1:4,4:8:13.80:85,0,14	0/0:11,0:11:24.08:0,24,316	1/1:10,8:18:33.07:350,33,0	0/0:20,0:20:57.16:0,57,722	0/0:18,0:18:45.11:0,45,546	0/0:15,0:15:42.08:0,42,519	0/0:26,0:26:75.24:0,75,980	1/1:1,24:25:75.19:806,75,0	0/0:11,0:11:18.05:0,18,221	0/0:6,0:6:3.01:0,3,39	0/0:44,0:44:99:0,111,1455	0/0:4,0:4:9:0,9,101	1/1:8,4:13:12.02:129,12,0	1/1:10,22:32:78.19:837,78,0	0/0:6,0:6:18.06:0,18,237	1/1:16,4:20:36.08:382,36,0	0/0:9,0:9:21.07:0,21,276	1/1:4,6:10:24.06:257,24,0
chr10	70880373	.	GT	G	1296.58	PASS	AB=0.900;AC=17;AF=0.304;AN=56;BaseQRankSum=13.642;DP=411;FS=1.324;HRun=1;HaplotypeScore=53.3471;InbreedingCoeff=0.8358;MQ=84.14;MQ0=0;MQRankSum=-2.457;QD=9.60;ReadPosRankSum=5.449;VQSLOD=1.4504;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,3:27:32.71:128,0,33	0/0:4,0:4:12.04:0,12,183	0/0:14,0:13:35.17:0,35,506	0/0:15,0:15:35.06:0,35,444	0/0:13,0:13:33.01:0,33,441	0/0:8,0:8:21.07:0,21,307	0/0:29,0:28:75.15:0,75,1014	0/0:25,0:25:72.19:0,72,1010	0/0:15,0:15:39.09:0,39,531	1/1:6,2:8:14.19:73,14,0	1/1:5,2:7:7.24:28,7,0	0/0:9,0:9:27.07:0,27,369	1/1:8,4:12:29.03:199,29,0	0/0:19,0:19:54.17:0,54,743	0/0:15,0:15:45.15:0,45,660	0/0:14,0:14:39.01:0,39,517	0/0:28,0:28:84.23:0,84,1182	1/1:24,1:25:63.67:304,64,0	0/0:9,0:9:27.03:0,27,339	0/0:2,0:2:2.88:0,3,15	0/0:38,0:38:99:0,114,1658	0/0:3,0:3:9.03:0,9,134	1/1:6,0:6:8.88:29,9,0	1/1:23,6:29:46.82:350,47,0	0/0:7,0:7:20.98:0,21,257	1/1:5,8:13:9.12:258,9,0	0/0:9,0:9:27.05:0,27,334	1/1:6,2:8:21.33:126,21,0
chr10	70880581	.	T	TCCTCC	1553.59	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.008;DP=615;FS=4.061;HRun=0;HaplotypeScore=115.0762;InbreedingCoeff=0.9144;MQ=81.56;MQ0=0;MQRankSum=-2.576;QD=36.13;ReadPosRankSum=-0.113;VQSLOD=3.5828;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,114,2116	0/0:4,0:4:12.01:0,12,193	0/0:25,0:21:31.13:0,31,415	0/0:25,0:24:36.86:0,37,599	0/0:12,0:12:18.06:0,18,328	0/0:14,0:14:36.12:0,36,686	0/0:35,0:35:75.20:0,75,1315	0/0:23,0:23:22.82:0,23,441	0/0:23,0:23:60.21:0,60,1143	1/1:6,9:15:21.07:569,21,0	1/1:0,3:3:3.01:87,3,0	0/0:24,0:24:51.16:0,51,934	0/0:25,0:25:69.24:0,69,1305	0/0:28,0:28:66.22:0,66,1185	0/0:19,0:19:54.17:0,54,972	0/0:13,0:13:27.08:0,27,472	0/0:44,0:44:99:0,111,2045	1/1:25,0:25:45.15:1029,45,0	0/0:19,0:19:39:0,39,681	0/0:17,0:17:42.14:0,42,788	0/0:44,0:44:90.31:0,90,1678	0/0:12,0:12:27.08:0,27,475	0/0:16,0:16:36.11:0,36,652	0/0:39,0:39:90.26:0,90,1649	0/0:15,0:15:39.12:0,39,711	0/0:21,0:21:45.12:0,45,802	0/0:17,0:17:33.11:0,33,615	0/0:8,0:8:18.06:0,18,343
chr10	70880587	.	C	CCTCCT	1723.27	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-0.552;DP=627;FS=0.704;HRun=0;HaplotypeScore=118.8082;InbreedingCoeff=0.6766;MQ=81.06;MQ0=0;MQRankSum=-2.171;QD=35.17;ReadPosRankSum=0.772;VQSLOD=3.1269;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,149,2662	0/0:5,0:5:12.04:0,12,237	0/0:26,0:22:45.30:0,45,688	0/0:28,0:26:39.49:0,39,777	0/0:9,0:9:24.06:0,24,426	0/0:15,0:15:36.12:0,36,755	0/0:37,0:37:93.26:0,93,1692	0/0:21,0:21:31.46:0,31,649	0/0:24,0:24:69.20:0,69,1331	0/1:14,0:14:45.88:382,0,46	1/1:4,0:4:3.01:60,3,0	0/0:24,0:24:66.16:0,66,1221	0/0:24,0:24:72.24:0,72,1473	0/0:27,0:27:81.21:0,81,1493	0/0:21,0:21:60.18:0,60,1172	0/0:12,0:12:36.10:0,36,635	0/0:46,0:46:99:0,135,2512	1/1:3,25:31:47.37:1400,47,0	0/0:22,0:22:63.11:0,63,1016	0/0:19,0:19:54.11:0,54,977	0/0:39,0:39:99:0,99,1961	0/0:12,0:12:33.09:0,33,608	0/0:20,0:20:48.10:0,48,841	0/0:39,0:39:99:0,108,2027	0/0:13,0:13:39.13:0,39,807	0/0:22,0:22:66.09:0,66,1101	0/0:15,0:15:42.11:0,42,769	0/0:8,0:8:24.05:0,24,426
chr10	70880899	.	CA	C	4201.98	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.198;DP=582;FS=0.806;HRun=3;HaplotypeScore=56.2421;InbreedingCoeff=0.9965;MQ=91.35;MQ0=0;MQRankSum=-3.697;QD=31.83;ReadPosRankSum=1.464;VQSLOD=3.7800;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,45:45:99:1413,114,0	0/0:9,0:9:27.09:0,27,389	0/0:25,0:25:63.21:0,63,879	0/0:21,0:21:57.14:0,57,737	0/0:21,0:21:63.19:0,63,887	0/0:16,0:16:45.15:0,45,647	0/0:31,0:31:90.28:0,90,1259	0/0:16,0:16:48.15:0,48,676	0/0:26,0:26:78.23:0,78,1071	0/0:29,0:29:84.27:0,84,1193	0/0:8,0:8:15.04:0,15,200	0/0:20,0:20:60.20:0,60,864	1/1:1,16:17:35.87:446,36,0	0/0:29,0:29:87.27:0,87,1219	0/0:23,0:23:66.18:0,66,884	0/0:21,0:21:63.21:0,63,907	0/0:36,0:36:99:0,102,1469	0/0:21,0:21:60.16:0,60,841	0/0:14,0:14:42.12:0,42,584	0/0:12,0:12:36.12:0,36,518	0/0:22,0:22:63.19:0,63,888	0/0:13,0:13:39.13:0,39,561	1/1:2,18:20:51.16:632,51,0	1/1:0,19:19:57.18:707,57,0	0/0:14,0:14:42.12:0,42,573	1/1:1,13:14:39.12:483,39,0	0/0:23,0:22:69.23:0,69,994	1/1:0,17:17:42.13:521,42,0
chr10	70881299	.	A	AT	5728.97	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=16.126;DP=557;FS=7.293;HRun=4;HaplotypeScore=87.6549;InbreedingCoeff=0.9980;MQ=97.86;MQ0=0;MQRankSum=-4.189;QD=35.58;ReadPosRankSum=0.898;VQSLOD=4.9147;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,39:42:96.32:1312,96,0	0/0:8,0:8:24.03:0,24,249	0/0:29,0:29:74.29:0,74,750	0/0:31,0:31:69.13:0,69,746	0/0:14,0:14:42.12:0,42,476	0/0:24,0:24:69.18:0,69,773	0/0:24,0:24:69.18:0,69,772	0/0:35,0:35:84.21:0,84,935	0/0:24,0:24:72.21:0,72,816	1/1:0,11:11:33.10:432,33,0	1/1:0,10:10:24.04:306,24,0	0/0:15,0:15:42.10:0,42,466	1/1:2,17:19:42.14:574,42,0	0/0:20,0:20:54.13:0,54,602	0/0:20,0:20:57.15:0,57,637	0/0:16,0:16:45.11:0,45,500	0/0:29,0:29:84.24:0,84,953	1/1:0,22:22:57.19:778,57,0	0/0:24,0:24:66.16:0,66,729	0/0:8,0:8:21.06:0,21,238	0/0:39,0:39:99:0,99,1112	0/0:8,0:8:24.07:0,24,272	1/1:0,8:8:24.08:328,24,0	1/1:0,20:20:60.20:820,60,0	0/0:12,0:12:33.09:0,33,374	1/1:1,16:17:51.17:687,51,0	0/0:16,0:16:45.13:0,45,510	1/1:0,12:12:36.12:492,36,0
chr10	70881495	.	A	AT	855.39	PASS	AB=0.786;AC=18;AF=0.360;AN=50;BaseQRankSum=5.184;DP=81;FS=1.829;HRun=0;HaplotypeScore=17.8171;InbreedingCoeff=0.5678;MQ=90.05;MQ0=0;MQRankSum=-4.257;QD=27.59;ReadPosRankSum=1.814;VQSLOD=4.0484;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:2,6:8:7.25:190,0,7	./.	0/0:4,0:4:12.03:0,12,149	0/0:5,0:5:11.45:0,11,113	0/0:3,0:3:5.98:0,6,66	./.	0/0:2,0:2:6:0,6,52	0/0:4,0:4:6.02:0,6,84	0/0:3,0:3:9.03:0,9,125	1/1:0,3:3:9.03:143,9,0	1/1:0,1:1:3.01:48,3,0	0/0:4,0:4:9:0,9,77	1/1:0,2:2:6.02:95,6,0	0/0:2,0:2:6:0,6,52	0/0:3,0:3:8.96:0,9,85	0/0:3,0:3:9.02:0,9,110	0/0:1,0:1:3.01:0,3,42	1/1:0,2:2:6.02:95,6,0	0/0:3,0:3:9:0,9,80	0/0:2,0:2:6.01:0,6,66	0/0:8,0:8:24.05:0,24,301	0/1:3,0:3:0.46:0,0,58	1/1:0,4:4:9.03:142,9,0	1/1:0,3:3:9.03:135,9,0	0/0:3,0:3:9.02:0,9,111	1/1:0,3:3:9.02:121,9,0	./.	1/1:0,2:2:3.01:47,3,0
chr10	70881604	.	C	CTCT	672.23	PASS	AB=0.556;AC=11;AF=0.220;AN=50;BaseQRankSum=1.457;DP=199;FS=1.621;HRun=0;HaplotypeScore=46.8994;InbreedingCoeff=0.6242;MQ=67.00;MQ0=7;MQRankSum=-4.407;QD=14.61;ReadPosRankSum=2.819;VQSLOD=3.2926;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,1:11:8.66:218,9,0	0/0:1,0:1:3.01:0,3,39	0/0:36,0:19:15.63:0,16,518	0/0:27,0:13:20.04:0,20,316	0/0:7,0:7:5.47:0,5,80	0/0:13,0:13:30.20:0,30,360	0/0:10,0:10:18.53:0,19,241	0/0:2,0:2:5.98:0,6,60	0/0:6,0:6:17.95:0,18,233	./.	./.	0/0:6,0:6:18.06:0,18,256	0/1:2,8:10:1.65:136,0,2	0/0:6,0:6:18.06:0,18,238	0/0:4,0:4:12.04:0,12,166	0/0:7,0:7:15.52:0,16,217	0/0:6,0:6:11.36:0,11,162	./.	0/0:4,0:4:6.02:0,6,96	0/0:1,0:1:3.01:0,3,48	0/0:5,0:5:11.64:0,12,160	0/0:1,0:1:3.01:0,3,33	1/1:3,0:3:6.02:71,6,0	1/1:5,1:7:6.17:62,6,0	0/0:5,0:5:15.05:0,15,196	1/1:11,0:11:10.13:289,10,0	0/0:6,0:6:18.06:0,18,248	1/1:0,4:4:3.01:41,3,0
chr10	70881949	.	A	AGTG	605.92	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.919;DP=463;FS=2.139;HRun=0;HaplotypeScore=77.7861;InbreedingCoeff=0.8574;MQ=64.11;MQ0=1;MQRankSum=-6.176;QD=21.64;ReadPosRankSum=-1.994;VQSLOD=3.2811;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:93.29:0,93,1538	0/0:6,0:6:18.05:0,18,279	0/0:13,0:13:27.98:0,28,462	0/0:14,0:13:30.10:0,30,471	0/0:21,0:21:63.21:0,63,1041	0/0:15,0:15:39.12:0,39,638	0/0:18,1:19:0.70:0,1,817	0/0:24,0:24:66.18:0,66,1093	0/0:12,0:12:36.12:0,36,613	1/1:7,3:9:18.06:297,18,0	1/1:7,1:8:5.10:73,5,0	0/0:17,0:17:51.15:0,51,836	0/0:24,0:24:69.24:0,69,1177	0/0:14,0:14:42.14:0,42,716	0/0:21,0:21:60.21:0,60,1016	0/0:20,0:20:57.19:0,57,972	0/0:23,0:23:66.23:0,66,1120	1/1:3,7:10:23.97:367,24,0	0/0:16,0:16:45.15:0,45,768	0/0:13,0:13:39.13:0,39,650	0/0:23,0:23:69.24:0,69,1177	0/0:13,0:13:39.13:0,39,665	0/0:13,0:13:36.12:0,36,613	0/0:19,0:19:54.18:0,54,920	0/0:11,0:11:27.09:0,27,445	0/0:19,0:19:57.20:0,57,970	0/0:25,0:25:72.25:0,72,1214	0/0:4,0:4:12.01:0,12,175
chr10	70881952	.	A	AGAGTG	971.16	PASS	AB=0.947;AC=7;AF=0.125;AN=56;BaseQRankSum=6.776;DP=449;FS=3.400;HRun=0;HaplotypeScore=88.9411;InbreedingCoeff=0.7599;MQ=62.30;MQ0=1;MQRankSum=-6.297;QD=24.90;ReadPosRankSum=-1.561;VQSLOD=3.2177;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:90.31:0,90,2025	0/0:6,0:6:18.05:0,18,360	0/0:10,0:10:27.98:0,28,621	0/0:13,0:12:30.06:0,30,594	0/0:22,0:22:66.21:0,66,1425	0/0:13,0:13:36.12:0,36,833	0/1:17,0:18:16.90:17,0,1134	0/0:26,0:26:69.10:0,69,1507	0/0:12,0:12:36.12:0,36,838	1/1:5,3:7:16.56:354,17,0	1/1:1,1:2:3.01:86,3,0	0/0:16,0:16:48.15:0,48,1072	0/0:24,0:24:72.23:0,72,1631	0/0:14,0:14:42.14:0,42,978	0/0:20,0:20:60.21:0,60,1355	0/0:19,0:19:57.20:0,57,1328	0/0:23,0:23:66.23:0,66,1513	1/1:4,7:10:27.04:651,27,0	0/0:15,0:15:45.12:0,45,999	0/0:13,0:13:39.13:0,39,875	0/0:23,0:23:69.24:0,69,1606	0/0:13,0:13:39.13:0,39,908	0/0:13,0:13:36.12:0,36,836	0/0:20,0:20:54.19:0,54,1248	0/0:11,0:11:27.09:0,27,597	0/0:19,0:19:57.20:0,57,1310	0/0:25,0:25:75.26:0,75,1713	0/0:4,0:4:12.01:0,12,232
chr10	70882421	.	GC	G	1610.12	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.288;DP=649;FS=3.597;HRun=2;HaplotypeScore=63.8340;InbreedingCoeff=0.9992;MQ=83.53;MQ0=1;MQRankSum=-1.481;QD=29.82;ReadPosRankSum=1.768;VQSLOD=3.3432;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,1864	0/0:10,0:10:30.10:0,30,446	0/0:25,0:25:72.20:0,72,1019	0/0:12,0:12:33.10:0,33,461	0/0:21,0:21:57.18:0,57,828	0/0:21,0:21:60.20:0,60,899	0/0:27,0:27:75.25:0,75,1121	0/0:29,0:29:84.28:0,84,1237	0/0:21,0:21:63.21:0,63,933	1/1:1,12:13:36.12:468,36,0	1/1:0,19:19:36.12:467,36,0	0/0:29,0:29:87.29:0,87,1297	0/0:29,0:29:87.29:0,87,1298	0/0:23,0:23:69.23:0,69,1034	0/0:25,0:25:75.21:0,75,1046	0/0:13,0:13:39.13:0,39,584	0/0:26,0:26:78.25:0,78,1143	1/1:1,21:22:63.20:818,63,0	0/0:18,0:18:54.18:0,54,809	0/0:20,0:20:57.18:0,57,833	0/0:52,0:51:99:0,153,2252	0/0:23,0:23:66.22:0,66,987	0/0:15,0:15:45.11:0,45,594	0/0:40,0:40:99:0,120,1774	0/0:14,0:14:39.12:0,39,564	0/0:25,0:25:75.21:0,75,1056	0/0:24,0:24:72.23:0,72,1053	0/0:9,0:9:27.09:0,27,401
chr10	70882911	.	TAAGA	T	3877	PASS	AB=0.933;AC=7;AF=0.125;AN=56;BaseQRankSum=12.258;DP=669;FS=1.515;HRun=0;HaplotypeScore=110.0559;InbreedingCoeff=0.8364;MQ=75.75;MQ0=0;MQRankSum=-2.338;QD=34.93;ReadPosRankSum=2.175;VQSLOD=3.9755;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:96.33:0,96,2560	0/0:9,0:9:27.09:0,27,720	0/0:17,0:16:48.14:0,48,1156	0/0:14,0:14:30.06:0,30,593	0/0:31,0:31:90.31:0,90,2371	0/0:32,0:32:90.31:0,90,2401	0/0:22,0:22:63.21:0,63,1612	0/0:39,0:39:99:0,114,2937	0/0:16,0:16:48.16:0,48,1280	1/1:5,34:39:99:1776,99,0	1/1:2,26:28:75.26:1399,75,0	0/0:20,0:20:60.20:0,60,1489	0/0:20,0:20:57.17:0,57,1428	0/0:27,0:27:78.26:0,78,1984	0/0:17,0:17:48.16:0,48,1214	0/0:14,0:14:42.14:0,42,1092	0/0:29,0:29:81.28:0,81,2065	1/1:1,15:16:36.12:672,36,0	0/0:25,0:25:69.21:0,69,1655	0/0:27,0:27:72.25:0,72,1920	0/0:15,0:15:39.13:0,39,1025	0/0:28,0:28:84.29:0,84,2131	0/0:26,0:26:69.24:0,69,1768	0/0:17,0:17:51.16:0,51,1292	0/0:34,0:34:93.30:0,93,2374	0/1:26,2:28:30.52:31,0,1855	0/0:31,0:31:81.28:0,81,2137	0/0:15,0:15:42.14:0,42,1120
chr10	70883321	.	AG	A	611.72	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.817;DP=749;FS=4.494;HRun=3;HaplotypeScore=73.4548;InbreedingCoeff=0.9998;MQ=83.53;MQ0=0;MQRankSum=0.007;QD=30.59;ReadPosRankSum=0.578;VQSLOD=3.4897;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:64:99:0,184,2614	0/0:15,0:15:42.14:0,42,605	0/0:25,0:25:63.14:0,63,843	0/0:19,1:19:47.74:0,48,624	0/0:28,0:28:84.28:0,84,1209	0/0:27,0:27:81.25:0,81,1131	0/0:22,0:22:63.21:0,63,902	0/0:22,0:22:66.21:0,66,933	0/0:39,0:39:99:0,111,1578	0/0:25,0:25:66.22:0,66,950	0/0:15,0:15:45.13:0,45,612	0/0:37,0:37:99:0,111,1556	0/0:31,0:31:93.28:0,93,1301	0/0:28,0:28:81.24:0,81,1127	0/0:30,0:30:87.27:0,87,1232	0/0:19,0:19:54.17:0,54,761	0/0:36,0:36:99:0,105,1501	1/1:0,20:20:57.18:707,57,0	0/0:14,0:14:39.10:0,39,524	0/0:23,0:23:69.23:0,69,991	0/0:36,0:36:99:0,102,1448	0/0:15,0:15:42.14:0,42,604	0/0:32,0:32:87.26:0,87,1207	0/0:23,0:23:69.22:0,69,975	0/0:26,0:26:75.24:0,75,1060	0/0:34,0:34:99:0,99,1422	0/0:26,0:26:75.25:0,75,1079	0/0:17,0:17:45.15:0,45,642
chr10	70883616	.	A	AC	2218.84	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-0.075;DP=735;FS=5.006;HRun=3;HaplotypeScore=77.4460;InbreedingCoeff=0.9996;MQ=91.88;MQ0=0;MQRankSum=-1.758;QD=28.45;ReadPosRankSum=0.084;VQSLOD=2.7549;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,1362	0/0:11,0:11:27.08:0,27,324	0/0:33,0:33:78.22:0,78,923	0/0:27,0:27:50.06:0,50,752	0/0:23,0:23:57.13:0,57,652	0/0:20,0:20:60.18:0,60,719	0/0:26,0:26:63.17:0,63,732	0/0:25,0:25:41.95:0,42,487	0/0:23,0:23:66.20:0,66,791	1/1:0,31:31:90.25:1219,90,0	1/1:0,17:17:42.14:586,42,0	0/0:31,0:31:84.24:0,84,995	0/0:21,0:21:54.16:0,54,643	0/0:30,0:30:84.25:0,84,998	0/0:34,0:34:93.28:0,93,1108	0/0:26,0:26:69.21:0,69,827	0/0:34,0:34:93.26:0,93,1091	1/1:30,0:30:80.08:557,80,0	0/0:34,0:34:93.24:0,93,1099	0/0:18,0:18:45.14:0,45,535	0/0:44,0:44:99:0,117,1390	0/0:21,0:21:57.16:0,57,672	0/0:27,0:27:56.87:0,57,680	0/0:30,0:30:87.27:0,87,1043	0/0:26,0:26:69.21:0,69,822	0/0:19,0:19:54.17:0,54,646	0/0:21,0:21:60.18:0,60,719	0/0:12,0:12:36.11:0,36,432
chr10	70883619	.	C	CG	1791.31	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.073;DP=748;FS=3.455;HRun=1;HaplotypeScore=77.7540;InbreedingCoeff=0.9990;MQ=89.11;MQ0=0;MQRankSum=-0.530;QD=22.11;ReadPosRankSum=1.973;VQSLOD=3.9249;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,1570	0/0:10,0:10:30.05:0,30,370	0/0:29,0:29:78.20:0,78,965	0/0:26,0:26:47.26:0,47,824	0/0:24,0:24:72.02:0,72,826	0/0:22,0:22:63.18:0,63,785	0/0:26,0:26:69.09:0,69,825	0/0:25,0:25:59.71:0,60,627	0/0:24,0:24:72.21:0,72,904	1/1:35,0:35:65.91:499,66,0	1/1:17,0:17:23.88:223,24,0	0/0:31,0:31:93.17:0,93,1122	0/0:22,0:22:63:0,63,751	0/0:29,0:29:84.24:0,84,1059	0/0:32,0:32:93.26:0,93,1182	0/0:28,0:28:80.88:0,81,965	0/0:33,0:33:93.20:0,93,1127	1/1:0,29:29:81.27:1212,81,0	0/0:36,0:36:99:0,99,1191	0/0:18,0:18:53.97:0,54,627	0/0:45,0:45:99:0,131,1562	0/0:23,0:23:63.10:0,63,763	0/0:27,0:27:74.98:0,75,856	0/0:31,0:31:93.25:0,93,1173	0/0:26,0:26:72.20:0,72,890	0/0:21,0:21:57.13:0,57,696	0/0:22,0:22:60.18:0,60,761	0/0:13,0:13:36.12:0,36,466
chr10	70884202	.	A	AAAGG	791.12	PASS	AB=1.000;AC=7;AF=0.135;AN=52;BaseQRankSum=3.313;DP=775;FS=8.945;HRun=0;HaplotypeScore=136.8924;InbreedingCoeff=0.5805;MQ=65.38;MQ0=5;MQRankSum=-0.841;QD=5.04;ReadPosRankSum=-2.843;VQSLOD=1.0901;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:46,0:47:39.13:750,39,0	0/0:10,0:10:9.03:0,9,138	./.	./.	0/0:29,0:29:22.16:0,22,556	0/0:20,0:20:27.07:0,27,391	1/1:29,9:40:6.02:140,6,0	0/1:28,0:28:0:0,0,0	0/0:34,0:34:48.08:0,48,669	0/1:25,0:25:4.61:5,0,175	0/1:17,0:17:17.99:18,0,116	0/0:40,0:40:45.13:0,45,647	0/0:38,0:38:59.93:0,60,866	0/0:33,0:33:54.15:0,54,778	0/0:30,0:30:48.13:0,48,666	0/0:30,0:30:57.18:0,57,851	0/0:24,0:23:42.14:0,42,634	0/0:25,0:25:14.79:0,15,138	0/0:23,0:23:23.98:0,24,310	0/0:19,0:19:21.05:0,21,282	0/0:44,0:44:48.11:0,48,647	0/0:33,0:33:51.16:0,51,759	0/0:26,0:26:39.11:0,39,553	0/0:21,0:21:54.15:0,54,767	0/0:23,0:23:36.10:0,36,500	0/0:35,0:35:43.05:0,43,597	0/0:34,0:34:69.23:0,69,1045	0/0:14,0:13:15.02:0,15,187
chr10	70884244	.	AG	A	443.21	PASS	AB=0.806;AC=3;AF=0.054;AN=56;BaseQRankSum=7.048;DP=804;FS=2.218;HRun=2;HaplotypeScore=95.6022;InbreedingCoeff=-0.0578;MQ=62.41;MQ0=11;MQRankSum=-1.613;QD=6.24;ReadPosRankSum=-0.594;VQSLOD=0.5167;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:44.88:0,45,550	0/0:12,0:12:36.12:0,36,520	0/0:17,0:15:44.88:0,45,574	0/0:17,0:16:48.13:0,48,641	0/0:25,0:25:67.90:0,68,930	0/0:25,0:25:75.24:0,75,1067	0/0:41,0:41:84.25:0,84,1137	0/0:41,0:38:99:0,111,1452	0/0:36,0:36:98.31:0,98,1455	0/1:26,8:34:99:281,0,236	0/1:7,8:15:34:207,0,34	0/0:32,0:31:87.28:0,87,1249	0/0:33,0:33:98.91:0,99,1194	0/0:30,0:30:90.28:0,90,1301	0/0:29,0:29:84.23:0,84,1159	0/0:37,0:37:99:0,108,1520	0/0:27,0:27:81.25:0,81,1161	0/1:21,1:22:55.27:55,0,292	0/0:31,0:24:70:0,70,949	0/0:17,0:17:51.17:0,51,737	0/0:41,0:41:99:0,117,1685	0/0:34,0:34:99:0,99,1428	0/0:20,0:20:59.96:0,60,740	0/0:28,0:28:80.98:0,81,1002	0/0:21,0:21:63.18:0,63,888	0/0:33,0:33:92.51:0,93,1026	0/0:42,0:42:99:0,123,1728	0/0:24,0:24:10.97:0,11,542
chr10	70884247	.	AAGG	A	571.94	PASS	AB=0.827;AC=3;AF=0.054;AN=56;BaseQRankSum=8.491;DP=810;FS=0.668;HRun=0;HaplotypeScore=127.9436;InbreedingCoeff=0.1550;MQ=64.40;MQ0=11;MQRankSum=-1.689;QD=8.17;ReadPosRankSum=-1.614;VQSLOD=2.9175;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:42.08:0,42,467	0/0:12,0:12:33.11:0,33,569	0/0:18,0:16:47.86:0,48,572	0/0:19,0:18:51.17:0,51,660	0/0:24,0:24:55.76:0,56,1118	0/0:26,0:26:72.14:0,72,1171	0/0:40,0:40:78.18:0,78,1020	0/0:43,0:40:99:0,108,1417	0/0:37,0:37:99:0,108,1872	0/1:24,8:32:99:314,0,101	0/1:8,7:15:2.81:272,0,3	0/0:31,0:30:74.93:0,75,1388	0/0:34,0:34:85.52:0,86,857	0/0:30,0:30:87.27:0,87,1678	0/0:28,0:28:81.27:0,81,1521	0/0:37,0:37:99:0,111,2019	0/0:27,0:27:78.26:0,78,1460	0/1:23,0:23:85.99:86,0,204	0/0:32,0:25:72.67:0,73,1124	0/0:17,0:17:51.17:0,51,898	0/0:42,0:42:99:0,126,2097	0/0:32,0:32:84.28:0,84,1602	0/0:20,0:20:56.03:0,56,565	0/0:29,0:29:84.92:0,85,869	0/0:24,0:24:69.22:0,69,1259	0/0:34,0:34:79.29:0,79,694	0/0:41,0:41:99:0,123,2250	0/0:23,0:23:41.73:0,42,401
chr10	70884250	.	G	GAAGA	3719.99	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=0.789;DP=798;FS=0.346;HRun=0;HaplotypeScore=131.4801;InbreedingCoeff=0.3147;MQ=67.00;MQ0=7;MQRankSum=-2.811;QD=12.92;ReadPosRankSum=-0.517;VQSLOD=3.2267;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,40:43:42.08:1103,42,0	0/0:12,0:12:32.89:0,33,367	0/0:20,0:18:40.90:0,41,428	0/0:21,0:20:53.91:0,54,502	0/0:22,0:22:57.38:0,57,897	0/0:24,0:24:36.55:0,37,837	0/1:38,0:38:61.95:62,0,511	0/0:42,0:40:99:0,111,1009	0/0:37,0:37:99:0,111,1423	1/1:31,0:31:75.76:716,76,0	1/1:15,0:15:17.29:224,17,0	0/0:27,0:26:74.61:0,75,1073	0/1:34,0:34:99:262,0,283	0/0:30,0:30:84.15:0,84,1297	0/0:27,0:27:81.12:0,81,1162	0/0:38,0:38:99:0,114,1588	0/0:27,0:27:81.08:0,81,1136	0/1:22,0:22:29.39:306,0,29	0/0:29,0:25:71.97:0,72,812	0/0:17,0:17:51.05:0,51,643	0/0:41,0:41:99:0,120,1443	0/0:28,0:28:84.11:0,84,1281	0/1:19,0:19:94.10:94,0,180	0/1:29,0:29:99:205,0,237	0/0:24,0:24:66.09:0,66,904	0/1:36,0:36:99:415,0,126	0/0:44,0:44:99:0,132,1822	0/1:21,0:21:8.10:332,0,8
chr10	70885247	.	T	TG	1771.41	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.320;DP=705;FS=4.239;HRun=5;HaplotypeScore=68.2421;InbreedingCoeff=0.9989;MQ=77.63;MQ0=0;MQRankSum=-0.363;QD=33.42;ReadPosRankSum=-0.469;VQSLOD=3.9074;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.23:0,93,999	0/0:16,0:16:45.11:0,45,481	0/0:20,0:19:32.64:0,33,467	0/0:12,0:12:27.93:0,28,281	0/0:29,0:29:81.20:0,81,870	0/0:22,0:22:57.14:0,57,613	0/0:25,0:25:75.19:0,75,806	0/0:36,0:36:99:0,99,1064	0/0:19,0:19:51.13:0,51,548	1/1:3,28:31:63.68:1109,64,0	1/1:3,19:22:60.19:784,60,0	0/0:35,0:35:96.24:0,96,1032	0/0:20,0:20:60.15:0,60,645	0/0:17,0:17:45.11:0,45,484	0/0:33,0:33:96.20:0,96,1014	0/0:33,0:33:90.22:0,90,967	0/0:22,0:22:66.17:0,66,709	0/0:26,0:26:72.18:0,72,774	0/0:21,0:21:45.11:0,45,484	0/0:27,0:27:72.18:0,72,774	0/0:32,0:32:84.14:0,84,889	0/0:21,0:21:60.15:0,60,645	0/0:29,0:29:81.18:0,81,861	0/0:30,0:30:81.16:0,81,852	0/0:30,0:30:84.21:0,84,903	0/0:24,0:24:66.17:0,66,709	0/0:30,0:30:84.19:0,84,893	0/0:9,0:9:27.07:0,27,290
chr10	70886767	.	TG	T	1870.96	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.463;DP=790;FS=6.712;HRun=8;HaplotypeScore=75.6285;InbreedingCoeff=0.9998;MQ=77.93;MQ0=0;MQRankSum=-1.434;QD=22.27;ReadPosRankSum=1.730;VQSLOD=4.3012;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,111,1282	0/0:18,0:18:54.16:0,54,642	0/0:25,0:24:51.62:0,52,597	0/0:26,0:27:54.12:0,54,604	0/0:29,0:29:72.19:0,72,833	0/0:21,0:21:51.15:0,51,605	0/0:30,0:30:75.23:0,75,906	0/0:26,0:26:69.18:0,69,802	0/0:24,0:24:72.19:0,72,836	1/1:7,30:37:93.14:895,93,0	1/1:6,15:21:51.08:492,51,0	0/0:32,0:32:90.26:0,90,1067	0/0:26,0:26:63.19:0,63,761	0/0:32,0:32:96.27:0,96,1137	0/0:34,0:34:96.26:0,96,1118	0/0:41,0:41:99:0,117,1391	0/0:30,0:30:78.20:0,78,917	1/1:2,24:26:66.06:627,66,0	0/0:17,0:17:39.11:0,39,461	0/0:19,2:21:31.20:0,31,649	0/0:26,0:26:72.18:0,72,849	0/0:33,0:33:87.24:0,87,1014	0/0:20,0:21:60.04:0,60,691	0/0:27,0:27:69.20:0,69,821	0/0:39,0:39:99:0,105,1208	0/0:31,0:31:81.22:0,81,946	0/0:32,0:32:90.26:0,90,1075	0/0:22,0:22:63.18:0,63,750
chr10	70887885	.	CA	C	808.13	PASS	AB=0.831;AC=9;AF=0.161;AN=56;BaseQRankSum=5.712;DP=552;FS=5.604;HRun=13;HaplotypeScore=78.1291;InbreedingCoeff=0.5152;MQ=63.92;MQ0=1;MQRankSum=-2.536;QD=9.29;ReadPosRankSum=2.065;VQSLOD=3.1383;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,1:30:41.04:0,41,547	0/1:8,0:8:3.80:4,0,104	0/0:14,1:12:8.17:0,8,103	0/0:11,0:10:1.81:0,2,47	0/0:37,4:42:23.56:0,24,627	0/0:23,0:23:42.06:0,42,404	0/1:6,1:7:7.08:7,0,79	0/0:23,1:24:20.15:0,20,353	0/0:13,0:13:24.03:0,24,229	0/0:20,1:21:29.46:0,29,248	0/0:23,2:25:8:0,8,230	0/0:12,0:12:29.98:0,30,265	0/1:5,8:13:23.49:89,0,23	0/0:20,0:20:42.06:0,42,404	0/0:18,1:19:19.98:0,20,333	0/0:15,0:16:32.84:0,33,289	0/0:25,2:27:19.20:0,19,492	1/1:5,20:25:55.45:414,55,0	0/0:15,0:15:27.04:0,27,263	0/0:24,1:28:34.71:0,35,454	0/0:15,1:16:9.38:0,9,244	0/0:21,2:23:1.25:0,1,336	1/1:7,14:21:9.58:233,10,0	1/1:2,9:12:30.92:209,31,0	0/0:24,3:28:22.89:0,23,348	0/0:15,0:15:33.04:0,33,317	0/0:20,1:20:29.91:0,30,404	0/0:18,0:18:47.93:0,48,429
chr10	70887936	.	TACATG	T	2351.06	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.567;DP=524;FS=1.985;HRun=0;HaplotypeScore=111.4225;InbreedingCoeff=0.9969;MQ=77.10;MQ0=15;MQRankSum=-7.455;QD=52.25;ReadPosRankSum=-0.537;VQSLOD=3.8284;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:28:63.17:0,63,1901	0/0:12,0:12:36.12:0,36,1141	0/0:19,0:19:23.47:0,23,1411	0/0:9,0:9:24.05:0,24,558	0/0:28,0:28:78.27:0,78,2473	0/0:20,0:20:60.21:0,60,1903	0/0:8,0:8:24.07:0,24,688	0/0:36,0:36:99:0,108,3339	0/0:14,0:14:39.13:0,39,1236	1/1:1,17:18:54.17:1102,54,0	1/1:4,12:16:36.12:766,36,0	0/0:18,0:18:54.19:0,54,1686	0/0:15,0:12:30.10:0,30,950	0/0:10,0:10:30.10:0,30,883	0/0:16,0:16:45.13:0,45,1287	0/0:13,0:13:39.13:0,39,1171	0/0:22,0:22:57.19:0,57,1745	1/1:3,8:11:33.11:626,33,0	0/0:23,0:22:63.22:0,63,1935	0/0:16,0:16:39.11:0,39,1112	0/0:27,0:27:75.26:0,75,2286	0/0:29,0:29:78.27:0,78,2432	0/0:22,0:17:39.13:0,39,1235	0/0:12,0:11:33.11:0,33,993	0/0:21,0:21:63.22:0,63,1994	0/0:23,0:20:57.20:0,57,1807	0/0:17,0:17:45.15:0,45,1380	0/0:15,0:11:33.11:0,33,946
chr10	70887984	.	ATG	A	185.15	PASS	AB=0.985;AC=26;AF=0.481;AN=54;BaseQRankSum=4.898;DP=597;FS=1.847;HRun=0;HaplotypeScore=90.0366;InbreedingCoeff=-0.0387;MQ=49.48;MQ0=50;MQRankSum=-2.225;QD=0.45;ReadPosRankSum=1.929;VQSLOD=1.5565;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:18:8.52:42,9,0	0/1:17,1:16:7.37:7,0,98	./.	0/0:23,0:15:3.01:0,3,42	0/1:20,1:21:8.80:9,0,212	0/1:16,1:18:61.01:61,0,84	0/0:24,0:23:18.06:0,18,241	0/0:33,0:25:3.01:0,3,36	1/1:14,0:13:0.01:4,0,0	0/1:19,0:14:4.43:8,0,4	0/1:15,0:14:1.46:1,0,2	0/1:20,0:18:18.25:18,0,101	1/1:16,0:10:2.60:10,3,0	0/1:12,0:12:23.80:24,0,58	0/1:24,0:21:2.47:2,0,204	0/0:16,0:15:8.51:0,9,59	0/1:26,0:26:36.38:36,0,359	1/1:5,0:3:3.68:14,4,0	0/0:25,0:23:12.03:0,12,142	0/0:20,0:19:15.02:0,15,181	0/1:63,1:54:32.02:32,0,145	0/0:30,0:30:5.11:0,5,141	1/1:22,0:13:2.84:14,3,0	1/1:9,0:5:2.84:14,3,0	0/1:21,0:20:4.49:4,0,160	0/1:26,0:17:0.79:1,0,1	0/1:17,0:16:7.74:8,0,85	0/1:14,0:9:0.24:18,0,0
chr10	70887999	.	T	TG	888.02	PASS	AB=0.978;AC=11;AF=0.196;AN=56;BaseQRankSum=6.897;DP=723;FS=18.130;HRun=1;HaplotypeScore=95.3223;InbreedingCoeff=0.4215;MQ=40.46;MQ0=134;MQRankSum=-4.505;QD=5.77;ReadPosRankSum=0.423;VQSLOD=-0.7458;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:13:23.76:249,24,0	0/0:17,0:12:30.04:0,30,343	0/0:17,0:9:27.09:0,27,342	0/0:22,0:12:36.11:0,36,449	0/0:26,0:25:57.10:0,57,707	0/0:27,0:24:50.84:0,51,557	0/0:43,0:31:8.60:0,9,533	0/0:44,0:28:58.02:0,58,684	0/0:17,0:14:25.02:0,25,307	0/1:19,0:11:36.73:37,0,45	0/1:20,0:14:5.96:6,0,9	0/0:30,0:19:51.02:0,51,597	0/1:22,0:9:13.53:143,0,14	0/0:25,0:17:32.96:0,33,400	0/0:27,0:19:36.10:0,36,448	0/0:22,0:15:36.12:0,36,460	0/0:33,0:31:75.52:0,76,899	0/0:11,0:3:3.90:0,4,41	0/0:27,0:21:48.13:0,48,592	0/0:23,0:17:33.11:0,33,423	0/0:87,0:65:95.44:0,95,1150	0/0:31,0:30:71.84:0,72,903	1/1:17,3:10:18.05:226,18,0	1/1:12,1:6:8.81:106,9,0	0/0:24,0:19:32.69:0,33,479	0/1:19,1:8:16.82:109,0,17	0/0:16,0:11:30.09:0,30,374	0/1:14,1:7:17.42:172,0,17
chr10	70888025	.	TGGG	T	371.79	PASS	AB=0.877;AC=11;AF=0.196;AN=56;BaseQRankSum=6.988;DP=740;FS=2.504;HRun=4;HaplotypeScore=103.6064;InbreedingCoeff=-0.0063;MQ=37.39;MQ0=193;MQRankSum=-8.499;QD=2.04;ReadPosRankSum=-1.347;VQSLOD=-0.7320;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,4:10:7.22:64,0,7	0/0:12,0:8:8.79:0,9,281	0/0:31,0:3:6.02:0,6,68	0/0:36,0:5:14.99:0,15,148	0/0:25,0:23:51.15:0,51,898	0/0:25,0:19:43.36:0,43,686	0/0:41,1:28:23.86:0,24,1016	0/0:53,0:34:38:0,38,1073	0/1:18,0:12:26.93:27,0,175	0/1:19,2:10:76.35:98,0,76	1/1:14,6:13:5.98:80,6,0	0/0:28,0:10:20.55:0,21,342	0/1:11,2:4:7.75:14,0,8	0/0:28,0:18:28.02:0,28,386	0/0:22,0:15:31.17:0,31,434	0/0:17,0:11:27.08:0,27,501	0/0:35,0:29:78.03:0,78,1356	0/1:15,1:6:20.87:37,0,21	0/0:23,0:10:24.07:0,24,457	0/0:22,0:13:20.06:0,20,353	0/0:88,1:63:99:0,113,1883	0/0:20,0:16:29.96:0,30,519	0/1:9,3:9:18.81:19,0,25	0/1:14,3:8:11.93:22,0,12	0/0:28,0:19:35.35:0,35,565	0/1:23,1:9:23.56:74,0,24	0/0:20,0:12:9.43:0,9,357	0/1:10,3:7:42.55:85,0,43
chr10	70888036	.	TGTGTGTG	T	332.29	PASS	AB=0.962;AC=8;AF=0.143;AN=56;BaseQRankSum=6.852;DP=791;FS=0.879;HRun=0;HaplotypeScore=141.2346;InbreedingCoeff=-0.0140;MQ=36.41;MQ0=197;MQRankSum=-7.216;QD=2.39;ReadPosRankSum=-0.548;VQSLOD=2.1772;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,3:11:5.36:0,5,39	0/0:9,0:6:3.37:0,3,417	0/0:47,0:4:7.84:0,8,156	0/0:63,0:5:15.04:0,15,369	0/0:24,0:22:45.14:0,45,1363	0/0:23,0:18:42.61:0,43,1379	0/0:43,0:31:24.40:0,24,1612	0/0:47,0:33:57.10:0,57,1514	0/1:21,0:14:32.73:33,0,506	0/1:22,0:10:14.76:15,0,131	1/1:20,0:14:3.02:32,3,0	0/0:29,0:10:8.49:0,8,280	0/0:14,0:4:9.92:0,10,161	0/0:28,0:19:29.98:0,30,721	0/0:15,0:9:12.04:0,12,443	0/0:18,0:13:33.10:0,33,876	0/0:37,0:30:72.24:0,72,2258	0/0:14,0:6:3.96:0,4,96	0/0:28,0:12:23.84:0,24,587	0/0:17,0:9:14.69:0,15,505	0/0:98,0:70:99:0,112,3641	0/0:18,0:13:24.08:0,24,680	0/1:15,0:12:4.40:4,0,101	0/0:22,1:13:0.99:0,1,14	0/0:29,0:20:38.43:0,38,1290	0/1:25,2:11:99:194,0,231	0/1:19,0:10:13.95:14,0,531	0/1:12,1:8:72.15:166,0,72
chr10	70888055	.	T	TA	650.53	PASS	AB=0.831;AC=14;AF=0.250;AN=56;BaseQRankSum=6.906;DP=807;FS=0.782;HRun=0;HaplotypeScore=113.1892;InbreedingCoeff=0.4301;MQ=38.01;MQ0=143;MQRankSum=-7.531;QD=4.68;ReadPosRankSum=0.084;VQSLOD=3.4872;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,6:12:44.25:81,0,44	0/0:6,0:5:12.04:0,12,163	0/0:94,1:8:12.51:0,13,153	0/0:108,0:8:16.47:0,16,185	0/0:19,0:19:48.15:0,48,653	0/0:17,0:14:39.13:0,39,541	0/0:49,0:40:99:0,105,1367	0/0:63,1:38:87.29:0,87,1212	0/0:21,0:17:14.15:0,14,357	0/1:14,0:9:15.24:78,0,15	1/1:11,1:12:8.43:52,8,0	0/0:22,0:17:32.77:0,33,445	1/1:4,4:6:8.39:184,8,0	0/0:16,0:14:39.13:0,39,531	0/0:16,0:13:26.98:0,27,376	0/0:19,0:15:13.18:0,13,424	0/0:26,0:25:69.16:0,69,933	1/1:6,0:2:0.47:1,0,0	0/0:35,0:13:24.05:0,24,330	0/0:16,0:13:30.10:0,30,407	0/0:91,0:73:99:0,138,1868	0/0:11,0:10:26.96:0,27,361	1/1:6,8:12:3.80:92,4,0	1/1:14,6:15:1.61:82,2,0	0/0:22,0:20:45.15:0,45,629	0/1:19,7:16:99:201,0,248	0/0:11,0:8:18.06:0,18,251	0/1:8,1:9:30.29:30,0,146
chr10	70888087	.	GGTGT	G	455.67	PASS	AB=0.899;AC=10;AF=0.179;AN=56;BaseQRankSum=7.402;DP=832;FS=7.400;HRun=0;HaplotypeScore=133.3889;InbreedingCoeff=0.4322;MQ=37.43;MQ0=107;MQRankSum=-5.741;QD=3.74;ReadPosRankSum=0.268;VQSLOD=1.9050;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,2:16:9.31:117,0,9	0/0:2,0:1:3.01:0,3,48	0/0:88,0:6:6.02:0,6,73	0/0:92,0:6:9.03:0,9,175	0/0:16,0:16:29.49:0,29,469	0/0:13,0:13:29.89:0,30,583	0/0:47,0:42:89.99:0,90,1738	0/0:79,0:54:90.95:0,91,1537	0/0:25,0:21:36.99:0,37,793	0/1:18,0:8:0.75:1,0,39	0/0:5,0:5:2.08:0,2,7	0/0:19,0:18:35.68:0,36,662	0/1:13,1:11:13.90:14,0,45	0/0:22,0:19:31.96:0,32,775	0/0:21,0:18:39:0,39,769	0/0:17,0:16:27.35:0,27,538	0/0:26,0:25:41.89:0,42,778	0/0:8,0:3:1.25:0,1,3	0/0:41,0:19:30.09:0,30,584	0/0:14,0:14:24.08:0,24,569	0/0:111,0:97:99:0,118,2543	0/0:19,0:18:48.11:0,48,986	1/1:13,2:13:2.34:81,2,0	1/1:20,3:16:9.36:82,9,0	0/0:20,0:17:36.97:0,37,594	1/1:19,3:15:7.63:214,8,0	0/0:10,0:9:19.67:0,20,469	0/1:6,2:8:5.09:83,0,5
chr10	70888090	.	GT	G	503.11	PASS	AB=0.802;AC=9;AF=0.161;AN=56;BaseQRankSum=7.546;DP=816;FS=0.771;HRun=1;HaplotypeScore=113.5735;InbreedingCoeff=0.3702;MQ=37.65;MQ0=102;MQRankSum=-6.126;QD=5.13;ReadPosRankSum=0.709;VQSLOD=0.2903;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,6:15:3.90:107,0,4	0/0:2,0:1:3.01:0,3,48	0/0:88,0:6:15.04:0,15,185	0/0:93,0:7:18.06:0,18,267	0/0:19,0:17:36.99:0,37,532	0/0:14,0:13:33.98:0,34,494	0/0:44,0:40:97.21:0,97,1455	0/0:75,1:51:99:0,128,1782	0/0:22,0:18:45.15:0,45,675	0/0:21,0:9:4.32:0,4,60	0/0:8,0:6:2.96:0,3,9	0/0:21,0:19:46.02:0,46,673	0/1:8,4:10:44.10:159,0,44	0/0:20,0:17:35.95:0,36,564	0/0:24,0:21:44.89:0,45,695	0/0:15,0:13:33.21:0,33,469	0/0:27,0:25:58.04:0,58,809	0/1:6,0:3:2.14:3,0,2	0/0:43,0:18:42.13:0,42,607	0/0:17,0:17:39.09:0,39,533	0/0:109,4:98:99:0,142,2291	0/0:20,0:19:48.16:0,48,752	1/1:8,4:11:7.54:86,8,0	0/1:12,9:15:9.13:16,0,9	0/0:20,0:17:36.51:0,37,564	0/1:14,5:13:57.44:143,0,57	0/0:10,0:9:24.08:0,24,378	1/1:5,3:8:8.66:125,9,0
chr10	70888104	.	ATG	A	287.31	PASS	AB=0.982;AC=10;AF=0.192;AN=52;BaseQRankSum=7.491;DP=757;FS=15.951;HRun=0;HaplotypeScore=117.1575;InbreedingCoeff=0.3174;MQ=40.15;MQ0=79;MQRankSum=-5.155;QD=3.83;ReadPosRankSum=3.708;VQSLOD=1.5653;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:13:23.17:90,0,23	./.	./.	0/0:96,0:6:15.03:0,15,187	0/0:15,0:15:26.74:0,27,370	0/0:13,0:13:25.72:0,26,399	0/0:46,0:41:77.57:0,78,1090	0/0:60,0:47:83.97:0,84,1121	0/0:18,0:17:33.09:0,33,497	0/0:17,0:7:8.11:0,8,53	0/0:7,0:7:4.85:0,5,19	0/0:17,0:17:32.60:0,33,488	0/1:9,0:8:36.73:59,0,37	0/0:21,0:21:44.84:0,45,688	0/0:29,0:26:51.09:0,51,667	0/0:21,0:19:41.73:0,42,619	0/0:22,0:21:31.63:0,32,473	1/1:3,0:3:1.25:3,1,0	0/0:29,0:16:25.32:0,25,370	0/0:18,0:18:48.09:0,48,705	0/0:113,1:101:55.86:0,56,1811	0/0:27,0:26:60.14:0,60,908	1/1:11,1:12:2.79:13,3,0	0/0:16,2:15:4.44:0,4,13	0/1:12,1:13:24.88:25,0,135	1/1:17,1:14:22.97:162,23,0	0/0:12,0:11:27.09:0,27,423	0/1:5,0:5:25.60:71,0,26
chr10	70888121	.	TTGTG	T	691.24	PASS	AB=0.875;AC=11;AF=0.196;AN=56;BaseQRankSum=8.738;DP=778;FS=17.583;HRun=0;HaplotypeScore=126.9315;InbreedingCoeff=0.0817;MQ=40.44;MQ0=97;MQRankSum=-8.208;QD=3.82;ReadPosRankSum=-0.616;VQSLOD=1.3095;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,1:12:79.28:145,0,79	0/0:2,1:3:6.02:0,6,120	0/0:102,0:1:3.01:0,3,33	0/1:113,0:8:9.75:10,0,285	0/0:13,0:12:30.10:0,30,849	0/0:12,0:12:35.48:0,35,936	0/0:49,0:45:99:0,113,2717	0/0:60,0:53:99:0,133,2945	0/0:17,1:17:48.16:0,48,1230	0/1:7,1:4:69.88:94,0,70	1/1:5,2:7:5.23:38,5,0	0/0:21,0:21:60.21:0,60,1593	0/1:7,2:9:84.90:85,0,265	0/0:21,0:22:60.16:0,60,1541	0/0:26,0:23:60.21:0,60,1621	0/0:21,0:21:55.07:0,55,1487	0/0:21,0:21:45.15:0,45,1165	1/1:1,0:1:3.01:44,3,0	0/0:26,0:17:39.13:0,39,982	0/0:21,0:20:60.21:0,60,1710	0/0:117,2:109:99:0,209,5631	0/0:24,0:24:66.23:0,66,1800	0/1:8,0:8:14:42,0,14	0/0:15,1:14:4.35:0,4,29	0/0:9,0:9:27.09:0,27,667	0/1:12,5:11:21.59:247,0,22	0/0:10,0:10:30.10:0,30,806	0/1:3,2:5:24.98:131,0,25
chr10	70888124	.	TG	T	464.50	PASS	AB=0.798;AC=11;AF=0.196;AN=56;BaseQRankSum=8.553;DP=788;FS=22.836;HRun=2;HaplotypeScore=104.8797;InbreedingCoeff=0.2493;MQ=40.44;MQ0=102;MQRankSum=-7.554;QD=7.04;ReadPosRankSum=-0.971;VQSLOD=-0.6300;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:10,3:12:26.28:130,0,26	0/0:5,0:5:5.85:0,6,85	0/0:108,0:2:6.02:0,6,78	0/0:114,1:7:4.93:0,5,180	0/0:12,0:11:30.10:0,30,441	0/0:12,1:13:32.63:0,33,519	0/0:47,1:44:99:0,107,1520	0/0:58,2:52:81.44:0,81,1617	0/0:17,1:17:48.16:0,48,692	0/1:5,2:4:32.92:57,0,33	1/1:3,3:6:1.24:3,1,0	0/0:21,0:21:60.20:0,60,894	0/1:8,1:9:28.26:28,0,135	0/0:22,0:22:60.15:0,60,849	0/0:24,0:22:60:0,60,888	0/0:21,0:21:54.18:0,54,808	0/0:22,0:22:45.15:0,45,663	1/1:0,1:1:3.01:38,3,0	0/0:28,1:19:42.14:0,42,613	0/0:21,0:20:60.20:0,60,894	0/0:118,4:110:99:0,220,3379	0/0:25,0:25:66.01:0,66,956	0/1:5,3:8:13.88:30,0,14	0/0:10,5:13:5.65:0,6,35	0/0:10,0:9:27.09:0,27,391	0/1:12,5:11:15.67:208,0,16	0/0:11,0:11:30.05:0,30,423	1/1:3,2:5:11.90:113,12,0
chr10	70888135	.	TTGTG	T	114.86	PASS	AB=0.917;AC=7;AF=0.125;AN=56;BaseQRankSum=7.890;DP=818;FS=13.301;HRun=0;HaplotypeScore=132.6913;InbreedingCoeff=0.3358;MQ=42.02;MQ0=92;MQRankSum=-6.271;QD=2.73;ReadPosRankSum=-3.844;VQSLOD=-0.0122;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,1:11:13.69:134,14,0	0/0:4,1:5:5.84:0,6,119	0/0:117,0:2:6.02:0,6,130	0/0:113,0:9:9.86:0,10,370	0/0:14,0:14:36.09:0,36,854	0/0:12,0:12:36.12:0,36,885	0/0:50,0:47:99:0,116,3185	0/0:57,0:48:99:0,111,2680	0/0:16,1:17:44.63:0,45,1182	0/0:6,0:4:5.64:0,6,127	1/1:6,0:6:3.92:16,4,0	0/0:23,0:23:66.23:0,66,1818	0/1:6,0:8:46.42:46,0,73	0/0:26,0:26:68.39:0,68,1573	0/0:26,0:24:66.17:0,66,1682	0/0:24,0:24:63.18:0,63,1662	0/0:22,2:24:24.21:0,24,1356	0/0:1,0:1:2.97:0,3,20	0/0:28,0:20:42.14:0,42,1023	0/0:25,0:24:72.23:0,72,1899	0/0:127,4:124:99:0,232,7140	0/0:26,0:26:69.24:0,69,1884	0/1:7,0:7:12.39:37,0,12	0/1:5,3:8:4.36:4,0,12	0/0:12,0:11:30.10:0,30,733	0/0:15,0:11:4.18:0,4,229	0/0:12,0:12:36.08:0,36,958	0/0:4,0:4:3.08:0,3,116
chr10	70888160	.	GTGTGT	G	742.11	PASS	AB=0.915;AC=13;AF=0.241;AN=54;BaseQRankSum=7.997;DP=780;FS=0.743;HRun=0;HaplotypeScore=127.9476;InbreedingCoeff=0.5893;MQ=48.21;MQ0=66;MQRankSum=-7.834;QD=9.76;ReadPosRankSum=-5.301;VQSLOD=0.8722;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,1:11:6.02:100,6,0	0/0:6,0:6:12:0,12,292	0/0:101,0:9:23.82:0,24,326	0/0:88,0:8:15.04:0,15,271	0/0:14,0:14:39.13:0,39,993	0/0:17,0:17:36.11:0,36,975	0/0:44,0:42:99:0,105,2923	0/0:46,0:40:76.88:0,77,1804	0/0:22,0:21:48.05:0,48,1203	1/1:1,0:1:3.01:49,3,0	./.	0/0:24,0:24:54.18:0,54,1504	0/1:15,2:14:30.60:178,0,31	0/0:26,0:25:55.81:0,56,1431	0/0:18,0:17:45.15:0,45,1223	0/0:19,0:19:48.08:0,48,1267	0/0:19,0:19:23.38:0,23,1017	1/1:2,0:1:1.55:4,2,0	0/0:37,0:26:48.16:0,48,1005	0/0:23,0:23:60.20:0,60,1751	0/0:133,1:127:99:0,303,8279	0/0:31,0:31:72.66:0,73,1812	1/1:6,3:8:17.95:223,18,0	0/1:11,0:10:10.77:33,0,11	0/0:18,0:17:48.16:0,48,1330	0/1:12,3:13:6.39:232,0,6	0/0:12,0:12:30.07:0,30,690	1/1:3,0:3:8.93:79,9,0
chr10	70888164	.	GT	G	565.05	PASS	AB=0.647;AC=15;AF=0.278;AN=54;BaseQRankSum=8.715;DP=772;FS=1.415;HRun=2;HaplotypeScore=90.5962;InbreedingCoeff=0.7620;MQ=48.26;MQ0=62;MQRankSum=-8.019;QD=7.24;ReadPosRankSum=-3.608;VQSLOD=-0.3847;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,6:10:6.23:51,6,0	0/0:5,0:5:12:0,12,155	0/0:102,0:10:20.82:0,21,275	0/0:89,1:9:15.04:0,15,190	0/0:14,0:14:39.11:0,39,523	0/0:16,0:16:39.11:0,39,574	0/0:42,0:41:99:0,108,1544	0/0:45,1:39:70.92:0,71,1256	0/0:20,0:19:36.95:0,37,633	1/1:3,0:1:3:28,3,0	./.	0/0:21,0:21:54.18:0,54,794	1/1:10,8:14:3.04:167,3,0	0/0:26,0:25:54.81:0,55,837	0/0:18,0:17:45.15:0,45,664	0/0:20,0:20:51.09:0,51,720	0/0:18,1:19:40.56:0,41,593	1/1:0,2:1:2.96:19,3,0	0/0:36,0:25:51.17:0,51,718	0/0:22,0:22:60.19:0,60,885	0/0:131,3:127:99:0,312,4550	0/0:31,0:31:75.21:0,75,1053	1/1:6,3:8:17.94:189,18,0	0/1:5,6:10:24.73:30,0,25	0/0:19,0:18:51.17:0,51,737	1/1:12,4:13:17.84:180,18,0	0/0:11,0:11:30.07:0,30,420	1/1:2,1:3:8.67:71,9,0
chr10	70888165	.	T	TG	670.23	PASS	AB=0.938;AC=15;AF=0.278;AN=54;BaseQRankSum=8.432;DP=774;FS=4.530;HRun=1;HaplotypeScore=100.0733;InbreedingCoeff=0.7545;MQ=48.19;MQ0=62;MQRankSum=-8.112;QD=7.89;ReadPosRankSum=-4.097;VQSLOD=-0.5808;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,3:11:3.81:41,4,0	0/0:4,0:4:12:0,12,146	0/0:100,0:10:20.18:0,20,271	0/0:88,0:9:15.04:0,15,183	0/0:15,0:15:39.07:0,39,482	0/0:15,0:15:39.13:0,39,536	0/0:43,0:43:99:0,108,1457	0/0:45,0:39:70.92:0,71,1202	0/0:19,0:19:17.87:0,18,573	1/1:3,0:1:2.88:15,3,0	./.	0/0:21,0:21:54.18:0,54,749	1/1:15,3:14:0.65:232,1,0	0/0:24,0:24:56.35:0,56,785	0/0:18,0:17:45.15:0,45,625	0/0:20,0:20:51.08:0,51,682	0/0:17,0:17:41.39:0,41,560	1/1:2,0:1:2.99:24,3,0	0/0:35,0:25:51.17:0,51,694	0/0:21,0:21:60.19:0,60,825	0/0:134,0:130:99:0,314,4291	0/0:30,0:30:78.22:0,78,1028	1/1:8,0:8:17.94:188,18,0	0/1:14,0:13:6.90:36,0,7	0/0:19,0:18:51.17:0,51,708	1/1:16,1:14:20.37:217,20,0	0/0:13,0:13:30.07:0,30,393	1/1:3,0:3:8.98:84,9,0
chr10	70888239	.	ATGTG	A	1484.25	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.977;DP=1017;FS=39.969;HRun=0;HaplotypeScore=156.9224;InbreedingCoeff=0.8890;MQ=40.19;MQ0=113;MQRankSum=-4.779;QD=11.51;ReadPosRankSum=0.112;VQSLOD=1.6581;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,11:18:18.82:289,19,0	0/0:12,0:11:29.38:0,29,448	0/0:118,0:8:15.03:0,15,239	0/0:115,0:6:15.05:0,15,215	0/0:27,0:25:35.62:0,36,793	0/0:28,0:29:62.91:0,63,1473	0/0:47,0:42:68.78:0,69,1251	0/0:72,0:52:78.25:0,78,1479	0/0:23,0:22:48.14:0,48,1092	0/0:15,0:5:5.31:0,5,41	0/0:6,0:4:2.99:0,3,24	0/0:25,0:25:15.54:0,16,1162	1/1:19,9:23:35.71:464,36,0	0/0:29,0:28:48.23:0,48,1031	0/0:38,0:35:76.29:0,76,1400	0/0:29,0:22:46.28:0,46,937	0/0:22,0:22:51.13:0,51,1142	0/0:4,0:3:5.81:0,6,37	0/0:34,0:17:24.64:0,25,325	0/0:22,0:21:42.14:0,42,963	0/0:142,0:126:99:0,179,3667	0/0:32,0:30:66.17:0,66,1347	1/1:10,8:18:24.08:394,24,0	1/1:20,7:23:8.22:94,8,0	0/0:23,0:22:41:0,41,865	1/1:22,5:18:17.99:269,18,0	0/0:16,0:14:27.06:0,27,481	1/1:4,2:6:12.02:153,12,0
chr10	70888264	.	GGT	G	1851.97	PASS	AB=0.821;AC=17;AF=0.304;AN=56;BaseQRankSum=10.888;DP=916;FS=29.438;HRun=0;HaplotypeScore=134.8172;InbreedingCoeff=0.6861;MQ=45.37;MQ0=78;MQRankSum=-6.215;QD=9.26;ReadPosRankSum=-2.314;VQSLOD=1.3883;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,16:25:26.98:294,27,0	0/0:16,1:16:3.36:0,3,522	0/0:76,0:4:3:0,3,29	0/0:75,0:11:12.03:0,12,145	0/0:26,0:24:57.19:0,57,898	0/1:22,6:27:94.86:95,0,442	0/0:41,1:37:17.10:0,17,848	0/0:53,0:41:57.12:0,57,842	0/0:30,1:30:39.65:0,40,1077	0/1:16,0:11:15.19:15,0,17	1/1:5,0:11:5.41:27,5,0	0/0:35,1:32:42.37:0,42,1064	1/1:9,15:19:30.06:342,30,0	0/0:30,0:31:8.07:0,8,852	0/0:38,0:35:69.23:0,69,1081	0/0:29,0:25:60.02:0,60,898	0/0:26,0:26:42.02:0,42,584	0/1:1,0:3:2.15:20,0,2	0/0:29,0:20:33.11:0,33,523	0/0:24,0:26:46.43:0,46,820	0/0:102,3:94:24.96:0,25,1693	0/0:34,0:34:56.93:0,57,857	1/1:5,17:23:39.06:435,39,0	1/1:11,11:20:26.87:296,27,0	0/0:25,0:23:9.51:0,10,585	1/1:19,13:26:20.18:401,20,0	0/0:16,0:14:24.06:0,24,378	1/1:4,1:5:11.81:119,12,0
chr10	70889782	.	CAAAAACAA	C	2544.32	PASS	AB=0.947;AC=12;AF=0.214;AN=56;BaseQRankSum=4.883;DP=575;FS=0.000;HRun=0;HaplotypeScore=166.8679;InbreedingCoeff=0.3154;MQ=50.39;MQ0=23;MQRankSum=-6.549;QD=16.00;ReadPosRankSum=-2.666;VQSLOD=2.1353;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:29:29,0,102	0/0:8,0:8:23.26:0,23,531	0/1:23,0:6:2.92:3,0,3	0/0:28,0:10:16.16:0,16,164	0/0:15,0:15:38.74:0,39,983	0/0:19,0:19:57.12:0,57,1457	0/0:19,0:19:43.11:0,43,1314	0/0:33,0:31:63.27:0,63,1116	0/0:16,0:16:44.54:0,45,848	1/1:17,11:27:71.90:1351,72,0	0/1:8,7:14:57.87:644,0,58	0/0:25,0:26:70.84:0,71,1703	0/0:12,0:10:6.75:0,7,125	0/0:19,0:17:39.60:0,40,1008	0/0:28,0:28:64.31:0,64,1571	0/1:8,0:8:7.96:8,0,327	0/0:27,0:26:64.87:0,65,1622	1/1:16,5:20:20.54:622,21,0	0/0:26,0:21:50.61:0,51,825	0/0:26,0:26:65.83:0,66,1641	0/0:9,0:8:4.34:0,4,243	0/0:24,0:23:51.53:0,52,1292	0/1:10,0:9:17.18:17,0,77	1/1:6,0:6:2.60:5,3,0	0/0:29,0:25:64.05:0,64,1447	0/1:26,0:26:16.48:16,0,108	0/0:34,0:33:86.87:0,87,2118	0/0:17,0:17:3:0,3,27
chr10	70889788	.	CAA	C	882.55	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.371;DP=596;FS=5.182;HRun=15;HaplotypeScore=118.9587;InbreedingCoeff=0.7930;MQ=48.18;MQ0=28;MQRankSum=-5.262;QD=9.92;ReadPosRankSum=1.529;VQSLOD=2.5263;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:27.08:0,27,124	0/0:7,0:8:20.50:0,20,216	1/1:23,0:6:2.44:9,2,0	0/0:26,0:8:11.46:0,11,86	0/0:16,0:16:43.08:0,43,414	0/0:20,0:22:56.35:0,56,592	0/0:20,0:21:40.67:0,41,520	0/0:28,0:28:46.20:0,46,467	0/0:17,0:18:39.47:0,39,439	1/1:18,9:26:64.18:524,64,0	1/1:11,4:14:8.49:264,8,0	0/0:29,0:31:64.64:0,65,726	0/0:12,0:10:12.78:0,13,46	0/0:19,0:18:41.04:0,41,440	0/0:26,0:28:51.96:0,52,601	0/0:8,0:8:14.87:0,15,156	0/0:28,0:27:68.84:0,69,790	1/1:19,5:20:14.21:224,14,0	0/0:29,0:22:23.33:0,23,290	0/0:24,0:24:51.44:0,51,604	0/0:9,0:8:5.93:0,6,49	0/0:25,0:25:36.33:0,36,512	0/0:10,0:9:14.67:0,15,64	0/0:6,0:6:0.94:0,1,2	0/0:28,0:26:30.24:0,30,511	0/0:27,0:27:25.64:0,26,129	0/0:39,0:38:85.33:0,85,974	0/0:15,0:15:2.98:0,3,21
chr10	70889794	.	A	AC	46.83	PASS	AB=0.937;AC=4;AF=0.071;AN=56;BaseQRankSum=8.227;DP=613;FS=9.914;HRun=0;HaplotypeScore=120.4869;InbreedingCoeff=0.2090;MQ=49.62;MQ0=35;MQRankSum=-4.329;QD=0.59;ReadPosRankSum=1.973;VQSLOD=1.8855;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:48.53:0,49,322	0/0:8,0:8:23.99:0,24,265	1/1:19,0:4:1.70:6,2,0	0/0:28,0:10:11.12:0,11,112	0/0:20,0:18:43.97:0,44,482	0/0:22,0:22:61.80:0,62,666	0/0:23,0:23:63.33:0,63,623	0/0:30,0:28:32.58:0,33,637	0/0:19,0:19:52.84:0,53,521	0/1:31,2:31:17.44:115,0,17	0/0:21,1:20:11.67:0,12,96	0/0:31,0:31:90.57:0,91,851	0/0:13,0:11:26.83:0,27,166	0/0:19,0:17:39.31:0,39,414	0/0:29,0:29:71.23:0,71,734	0/0:8,0:8:21.05:0,21,236	0/0:29,0:28:78.04:0,78,883	0/1:25,2:23:18.15:18,0,108	0/0:24,0:16:47.85:0,48,496	0/0:25,0:23:57.65:0,58,643	0/0:9,0:8:20.20:0,20,176	0/0:26,0:25:54.84:0,55,643	0/0:9,0:8:22.81:0,23,134	0/0:6,0:6:7.57:0,8,37	0/0:31,0:27:71.11:0,71,732	0/0:30,0:29:66.33:0,66,466	0/0:38,0:37:99:0,101,1060	0/0:14,0:14:3:0,3,26
chr10	70890420	.	TA	T	1096.64	PASS	AB=0.889;AC=7;AF=0.125;AN=56;BaseQRankSum=1.664;DP=580;FS=1.792;HRun=9;HaplotypeScore=73.5467;InbreedingCoeff=0.8290;MQ=84.29;MQ0=2;MQRankSum=-1.601;QD=15.45;ReadPosRankSum=-0.484;VQSLOD=3.8467;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,152,848	0/1:7,1:8:8.67:9,0,155	0/0:41,0:32:52.94:0,53,513	0/0:21,0:18:36.79:0,37,338	0/0:21,0:21:54.15:0,54,614	0/0:20,0:20:57.16:0,57,646	0/0:18,0:18:51.15:0,51,588	0/0:31,0:31:84.21:0,84,934	0/0:17,0:17:48.09:0,48,512	1/1:3,9:12:27.01:247,27,0	1/1:2,17:19:42.01:384,42,0	0/0:11,0:11:30.09:0,30,346	0/0:20,0:20:7.70:0,8,201	0/0:20,0:20:45.10:0,45,489	0/0:18,0:18:45.12:0,45,509	0/0:17,0:17:45.12:0,45,511	0/0:30,0:30:84.21:0,84,946	1/1:4,28:32:66.03:604,66,0	0/0:20,0:20:42.11:0,42,468	0/0:23,0:23:57.17:0,57,658	0/0:10,0:10:21.06:0,21,242	0/0:15,0:15:42.03:0,42,434	0/0:10,0:10:28.66:0,29,148	0/0:19,0:19:29.63:0,30,239	0/0:18,0:18:54.13:0,54,598	0/0:26,0:26:20.26:0,20,233	0/0:17,0:17:51.09:0,51,544	0/0:8,0:8:23.01:0,23,121
chr10	70892590	.	AG	A	4273.09	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.242;DP=666;FS=3.165;HRun=6;HaplotypeScore=68.2718;InbreedingCoeff=0.9998;MQ=82.80;MQ0=0;MQRankSum=-0.970;QD=27.04;ReadPosRankSum=2.074;VQSLOD=5.6205;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,35:38:99:1096,102,0	0/0:11,0:11:33.11:0,33,432	0/0:22,0:22:53.35:0,53,717	0/0:15,0:15:35.31:0,35,505	0/0:24,0:24:69.21:0,69,889	0/0:25,0:25:75.19:0,75,926	0/0:32,0:32:84.24:0,84,1074	0/0:26,0:26:69.20:0,69,869	0/0:19,0:19:57.15:0,57,720	0/0:20,0:20:60.18:0,60,766	0/0:13,0:13:36.08:0,36,455	0/0:32,0:32:84.23:0,84,1061	1/1:1,26:27:63.16:676,63,0	0/0:32,0:32:86.30:0,86,1092	0/0:26,0:26:78.23:0,78,1009	0/0:35,0:35:99:0,105,1330	0/0:34,0:34:87.28:0,87,1145	0/0:21,0:21:54.13:0,54,691	0/0:15,0:15:42.10:0,42,521	0/0:15,0:15:42.14:0,42,552	0/0:34,0:34:99:0,99,1272	0/0:13,0:13:36.12:0,36,469	1/1:0,15:15:38.84:419,39,0	1/1:2,33:35:84.21:903,84,0	0/0:14,0:14:42.13:0,42,538	1/1:5,26:31:41.72:793,42,0	0/0:30,0:30:87.28:0,87,1143	1/1:0,12:12:36.09:387,36,0
chr10	70892809	.	GT	G	2711.13	PASS	AB=0.914;AC=44;AF=0.815;AN=54;BaseQRankSum=2.392;DP=255;FS=0.000;HRun=1;HaplotypeScore=73.8535;InbreedingCoeff=0.0428;MQ=82.57;MQ0=1;MQRankSum=-4.818;QD=11.02;ReadPosRankSum=5.802;VQSLOD=1.5632;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,3:13:2.28:129,2,0	1/1:5,0:5:12.15:77,12,0	0/0:7,0:7:17.99:0,18,228	0/1:11,1:12:19.64:20,0,63	1/1:1,0:1:2.96:19,3,0	0/1:4,3:7:13.34:57,0,13	1/1:15,1:16:43.77:285,44,0	1/1:10,1:11:16.86:104,17,0	1/1:11,0:11:31.65:182,32,0	1/1:6,0:6:10.24:46,10,0	./.	1/1:15,0:15:37.83:232,38,0	0/1:12,1:13:28.04:148,0,28	0/1:9,0:9:10.05:86,0,10	1/1:8,0:8:23.12:144,23,0	1/1:13,0:13:37.04:197,37,0	1/1:16,0:16:39.91:214,40,0	1/1:9,0:9:25.46:130,25,0	1/1:7,0:7:19.37:131,19,0	0/1:8,0:8:10.76:44,0,11	1/1:10,2:11:20.18:132,20,0	1/1:5,2:7:14.24:113,14,0	0/1:5,1:6:2.62:3,0,34	0/1:11,0:11:1.45:75,0,1	1/1:1,1:2:2.94:18,3,0	0/1:8,1:9:26.12:26,0,43	1/1:18,0:18:42.69:230,43,0	1/1:1,0:1:2.80:13,3,0
chr10	70892844	.	A	AG	5560.96	PASS	AB=0.912;AC=54;AF=0.964;AN=56;BaseQRankSum=-0.294;DP=268;FS=12.484;HRun=1;HaplotypeScore=118.0467;InbreedingCoeff=-0.0488;MQ=72.23;MQ0=0;MQRankSum=-4.962;QD=20.75;ReadPosRankSum=0.558;VQSLOD=3.8294;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:50.63:387,51,0	1/1:1,3:4:11.96:117,12,0	0/1:10,0:11:31.51:32,0,58	0/1:8,0:9:21.95:22,0,94	1/1:0,4:4:11.97:105,12,0	1/1:1,5:6:17.90:144,18,0	1/1:2,12:14:41.67:317,42,0	1/1:0,21:21:62.83:553,63,0	1/1:4,5:9:26.65:230,27,0	1/1:2,10:12:35.92:335,36,0	1/1:0,5:5:8.97:76,9,0	1/1:3,13:16:43.88:357,44,0	1/1:1,14:15:28.68:258,29,0	1/1:2,7:9:26.72:214,27,0	1/1:1,6:7:20.82:161,21,0	1/1:2,7:9:26.66:213,27,0	1/1:6,5:11:23.23:188,23,0	1/1:0,7:7:20.99:189,21,0	1/1:1,7:8:24.02:237,24,0	1/1:0,5:5:11.92:97,12,0	1/1:3,19:22:53.23:494,53,0	1/1:1,3:4:11.95:108,12,0	1/1:0,2:2:5.60:40,6,0	1/1:1,10:11:8.90:85,9,0	1/1:1,8:9:26.84:233,27,0	1/1:0,9:9:26.05:188,26,0	1/1:1,7:8:17.90:110,18,0	1/1:0,3:3:8.98:74,9,0
chr10	70892846	.	TG	T	2039.95	PASS	AB=0.759;AC=50;AF=0.926;AN=54;BaseQRankSum=0.733;DP=265;FS=16.090;HRun=3;HaplotypeScore=129.1885;InbreedingCoeff=0.3491;MQ=72.43;MQ0=0;MQRankSum=-3.231;QD=8.03;ReadPosRankSum=0.679;VQSLOD=-0.0121;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:35.33:119,35,0	1/1:1,3:4:10.24:52,10,0	0/1:12,0:11:16.14:16,0,33	0/0:9,0:9:16.58:0,17,97	1/1:0,4:4:2.02:6,2,0	1/1:1,5:6:14.98:67,15,0	1/1:0,12:12:27.66:93,28,0	1/1:0,21:21:57.56:283,58,0	1/1:4,5:9:20.10:116,20,0	1/1:2,10:12:32.37:180,32,0	1/1:1,4:5:2.03:6,2,0	1/1:3,13:16:25.77:153,26,0	0/1:1,14:15:0.41:63,0,0	1/1:2,7:9:20.45:98,20,0	1/1:1,6:7:16.78:73,17,0	1/1:2,7:9:19.63:98,20,0	1/1:5,5:10:19:105,19,0	1/1:0,7:7:19.57:99,20,0	1/1:2,7:9:25.58:147,26,0	1/1:0,5:5:9.23:31,9,0	1/1:3,19:22:20.11:81,20,0	1/1:1,3:4:7.41:39,7,0	./.	1/1:0,10:10:4.02:14,4,0	1/1:1,8:9:19.42:83,19,0	1/1:0,8:9:14.86:72,15,0	1/1:1,7:8:1.58:25,2,0	1/1:0,3:3:8.08:35,8,0
chr10	70892866	.	AC	A	1633.09	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=0.658;DP=353;FS=2.739;HRun=4;HaplotypeScore=127.8287;InbreedingCoeff=0.9117;MQ=79.52;MQ0=0;MQRankSum=-2.942;QD=22.37;ReadPosRankSum=1.481;VQSLOD=2.2875;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,18:25:39.12:461,39,0	0/0:7,0:7:15.94:0,16,212	0/0:13,0:12:34.32:0,34,414	0/0:18,0:18:33.11:0,33,453	0/0:5,0:5:9.02:0,9,109	0/0:11,0:11:33.11:0,33,448	0/0:16,0:16:36.08:0,36,441	0/0:25,0:25:48.16:0,48,651	0/0:15,0:15:42.14:0,42,587	0/0:12,0:12:33.11:0,33,461	0/0:4,0:4:6.02:0,6,84	0/0:16,0:16:45.14:0,45,612	1/1:1,20:21:57.17:681,57,0	0/0:13,0:13:39.13:0,39,536	0/0:12,0:12:33.11:0,33,461	0/0:10,0:10:21.03:0,21,271	0/0:15,0:15:36.09:0,36,483	0/0:9,0:9:27.09:0,27,369	0/0:15,0:15:45.11:0,45,579	0/0:5,0:5:9.03:0,9,126	0/0:29,0:29:38.61:0,39,489	0/0:10,0:10:27.08:0,27,359	1/1:1,2:3:6.02:72,6,0	1/1:2,9:11:12.02:132,12,0	0/0:9,0:9:27.09:0,27,364	1/1:0,10:10:30.09:357,30,0	0/0:11,0:11:27.06:0,27,359	1/1:0,3:3:9.03:108,9,0
chr10	70894533	.	GCACA	G	2201.86	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.486;DP=728;FS=4.531;HRun=0;HaplotypeScore=116.2677;InbreedingCoeff=0.9975;MQ=85.10;MQ0=0;MQRankSum=-0.819;QD=42.34;ReadPosRankSum=2.386;VQSLOD=4.2076;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,3191	0/0:12,0:12:36.12:0,36,943	0/0:28,0:27:66.23:0,66,1609	0/0:33,0:33:84.21:0,84,1973	0/0:32,0:32:96.33:0,96,2479	0/0:18,0:18:51.18:0,51,1336	0/0:19,0:19:57.20:0,57,1391	0/0:25,0:25:66.22:0,66,1652	0/0:26,0:26:75.26:0,75,1927	1/1:7,29:36:87.30:1560,87,0	1/1:1,15:16:42.14:764,42,0	0/0:31,0:31:93.32:0,93,2409	0/0:15,0:15:45.15:0,45,1149	0/0:29,0:29:87.30:0,87,2278	0/0:38,0:38:99:0,114,2981	0/0:25,0:25:72.25:0,72,1827	0/0:21,0:21:60.21:0,60,1563	0/0:25,0:25:63.18:0,63,1555	0/0:12,0:12:30.10:0,30,786	0/0:28,0:28:84.29:0,84,2200	0/0:45,0:45:99:0,132,3397	0/0:29,0:29:78.27:0,78,2004	0/0:24,0:24:69.24:0,69,1799	0/0:25,0:25:72.25:0,72,1851	0/0:27,0:27:78.27:0,78,2038	0/0:32,1:33:41.75:0,42,2360	0/0:25,0:25:69.24:0,69,1766	0/0:7,0:7:21.07:0,21,550
chr10	70895557	.	GAAA	G	2639.71	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=3.033;DP=647;FS=7.107;HRun=14;HaplotypeScore=102.8920;InbreedingCoeff=0.9559;MQ=49.62;MQ0=21;MQRankSum=2.760;QD=14.75;ReadPosRankSum=6.195;VQSLOD=2.0309;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,32:47:59.74:678,60,0	0/0:13,0:12:30.06:0,30,475	0/0:6,0:2:5.94:0,6,41	0/0:6,0:2:6.02:0,6,94	0/0:34,0:39:76.41:0,76,1111	0/0:20,0:19:45.02:0,45,706	0/0:18,0:20:47.97:0,48,656	0/0:25,0:28:47.66:0,48,720	0/0:18,0:17:26.09:0,26,397	0/0:15,0:25:22.22:0,22,467	0/0:20,0:25:60.17:0,60,744	0/0:18,0:17:39.88:0,40,586	1/1:11,22:34:29.35:487,29,0	0/0:14,0:15:35.97:0,36,481	0/0:15,0:15:33.07:0,33,547	0/0:16,0:16:42.04:0,42,616	0/0:27,0:28:66.05:0,66,937	0/0:24,0:22:37.51:0,38,479	0/0:24,0:26:70.27:0,70,879	0/0:20,0:22:54.38:0,54,795	0/0:16,0:18:33.56:0,34,556	0/0:18,0:18:36.36:0,36,497	1/1:4,17:20:25.27:267,25,0	1/1:7,23:30:48.09:559,48,0	0/0:24,0:25:66.06:0,66,1052	1/1:7,19:26:43.77:591,44,0	0/0:28,0:31:69.74:0,70,947	1/1:10,8:12:21.02:245,21,0
chr10	70898531	.	G	GGGGA	1770.57	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-5.361;DP=385;FS=140.498;HRun=0;HaplotypeScore=78.8108;InbreedingCoeff=0.8392;MQ=87.98;MQ0=1;MQRankSum=-2.573;QD=19.04;ReadPosRankSum=6.218;VQSLOD=0.7295;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:27:23.44:504,23,0	0/0:12,0:12:27.40:0,27,226	0/0:25,0:22:42.96:0,43,587	0/0:24,0:23:44.41:0,44,536	0/0:8,0:8:14.90:0,15,111	0/0:22,0:22:47.77:0,48,461	0/0:14,0:14:28.27:0,28,273	0/0:25,0:25:47.67:0,48,467	0/0:14,0:14:31.68:0,32,262	0/0:11,0:11:29.99:0,30,295	0/0:7,0:7:12.02:0,12,122	0/0:11,0:11:21.01:0,21,189	1/1:2,6:9:1.62:70,2,0	0/0:15,0:15:26.97:0,27,235	0/0:10,0:10:15.48:0,15,164	0/0:13,0:13:27.90:0,28,285	0/0:13,0:13:35.99:0,36,338	0/0:11,0:11:18.73:0,19,136	0/0:6,0:6:12.02:0,12,156	0/0:2,0:2:3:0,3,25	0/0:14,0:13:14.85:0,15,131	0/0:7,0:7:6.01:0,6,78	1/1:2,11:15:9.03:211,9,0	1/1:4,18:24:33.10:754,33,0	0/0:9,0:9:20.99:0,21,188	1/1:2,5:10:17.99:257,18,0	0/0:19,0:19:42.89:0,43,411	1/1:0,7:8:6.02:143,6,0
chr10	70899054	.	CT	C	709.63	PASS	AB=0.901;AC=11;AF=0.196;AN=56;BaseQRankSum=8.689;DP=514;FS=6.725;HRun=12;HaplotypeScore=58.9493;InbreedingCoeff=0.3998;MQ=78.44;MQ0=4;MQRankSum=-0.705;QD=4.83;ReadPosRankSum=1.027;VQSLOD=1.2811;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:25:42.86:0,43,602	0/0:5,0:5:12.02:0,12,122	0/0:25,0:18:29.01:0,29,192	0/0:14,0:10:8.04:0,8,62	0/0:21,0:21:21.65:0,22,416	0/0:11,2:13:6.31:0,6,229	0/0:11,1:12:7.64:0,8,233	0/1:22,3:25:18.60:19,0,364	0/0:13,0:14:35.89:0,36,343	1/1:5,16:21:47.78:369,48,0	1/1:2,15:17:41.16:323,41,0	0/0:16,1:17:18.84:0,19,367	0/0:14,0:14:36.05:0,36,354	0/0:16,1:18:24.68:0,25,410	0/0:14,0:14:6.82:0,7,247	0/0:15,0:17:38.90:0,39,373	0/0:30,3:34:23.43:0,23,766	1/1:2,0:25:40.74:120,41,0	0/0:18,0:18:31.31:0,31,308	0/0:19,2:22:13.45:0,13,472	0/1:3,1:5:14.26:14,0,36	0/0:17,0:17:42.07:0,42,421	0/0:11,0:12:26.89:0,27,255	0/1:13,2:15:7.57:8,0,278	0/1:22,3:26:12.78:13,0,404	0/0:17,2:19:3.28:0,3,380	0/0:34,0:36:83.97:0,84,817	0/1:13,0:13:2.24:2,0,86
chr10	70899064	.	TTTA	T	410.66	PASS	AB=0.825;AC=4;AF=0.071;AN=56;BaseQRankSum=8.431;DP=515;FS=6.871;HRun=0;HaplotypeScore=83.0024;InbreedingCoeff=0.4412;MQ=76.09;MQ0=5;MQRankSum=-1.149;QD=6.96;ReadPosRankSum=2.194;VQSLOD=1.8062;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.10:0,78,1271	0/0:5,0:5:15.03:0,15,259	0/1:21,0:14:14.58:15,0,203	0/0:16,0:11:10.70:0,11,126	0/0:24,1:25:35.81:0,36,1069	0/0:14,0:14:39.07:0,39,565	0/0:13,0:13:39.08:0,39,598	0/0:21,0:21:50.98:0,51,729	0/0:14,0:14:39.08:0,39,701	0/0:17,0:17:47.05:0,47,370	0/0:18,0:18:44.44:0,44,397	0/0:18,0:18:48.08:0,48,835	0/0:12,0:12:36.12:0,36,693	0/0:17,0:17:48.10:0,48,845	0/0:15,0:15:39.03:0,39,581	0/0:17,0:17:48.12:0,48,805	0/0:34,0:34:99:0,102,1718	1/1:25,0:25:26.75:239,27,0	0/0:15,0:15:38.84:0,39,615	0/0:23,0:23:69.17:0,69,1161	0/0:5,0:5:11.99:0,12,137	0/0:19,0:19:51.11:0,51,906	0/0:10,0:10:26.45:0,26,461	0/0:14,0:14:42.09:0,42,691	0/0:24,0:24:66.11:0,66,1092	0/0:23,0:23:40.61:0,41,899	0/0:39,0:39:99:0,108,1809	0/1:6,7:13:99:271,0,207
chr10	70978452	.	G	GGACC	1165.55	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.229;DP=423;FS=15.501;HRun=0;HaplotypeScore=79.9528;InbreedingCoeff=0.9816;MQ=105.17;MQ0=0;MQRankSum=-3.869;QD=64.75;ReadPosRankSum=1.488;VQSLOD=4.7244;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.16:0,69,1216	0/0:10,0:10:30.10:0,30,560	0/0:28,0:28:75.21:0,75,1313	0/0:32,0:32:83.46:0,83,1446	1/1:1,17:18:48.16:1260,48,0	0/0:19,0:19:45.15:0,45,832	0/0:13,0:13:33.11:0,33,614	0/0:16,0:16:39.13:0,39,728	0/0:12,0:12:36.12:0,36,672	0/0:15,0:15:45.14:0,45,799	0/0:9,0:9:27.02:0,27,449	0/0:7,0:7:21.03:0,21,355	0/0:8,0:8:24.08:0,24,436	0/0:8,0:8:21.07:0,21,392	0/0:19,0:19:57.13:0,57,1025	0/0:17,0:17:51.17:0,51,951	0/0:15,0:15:42.10:0,42,748	0/0:11,0:11:33.11:0,33,616	0/0:15,0:15:45.09:0,45,717	0/0:19,0:19:54.12:0,54,961	0/0:18,0:18:45.07:0,45,801	0/0:15,0:15:45.15:0,45,839	0/0:14,0:14:42.14:0,42,767	0/0:15,0:15:39.07:0,39,682	0/0:14,0:14:42.13:0,42,754	0/0:9,0:9:24.08:0,24,448	0/0:14,0:14:39.13:0,39,724	0/0:7,0:7:21.01:0,21,267
chr10	70979140	.	T	TC	1372.53	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-1.455;DP=442;FS=6.811;HRun=8;HaplotypeScore=45.4362;InbreedingCoeff=0.8648;MQ=78.76;MQ0=0;MQRankSum=-0.334;QD=19.33;ReadPosRankSum=-1.286;VQSLOD=2.6237;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.01:0,42,384	0/0:3,0:3:8.99:0,9,77	0/0:12,0:14:16.73:0,17,121	0/1:15,0:15:25.43:25,0,96	0/0:18,0:18:48.02:0,48,439	0/0:24,0:24:63.03:0,63,576	0/0:18,0:18:45.01:0,45,412	0/0:35,0:35:62.95:0,63,564	0/0:22,0:22:54.01:0,54,490	1/1:1,11:12:30.09:346,30,0	1/1:1,17:18:45.13:519,45,0	0/0:13,0:13:36.02:0,36,329	1/1:2,6:8:15.04:173,15,0	0/0:10,0:10:26.97:0,27,239	0/0:18,0:18:42.01:0,42,384	0/0:11,0:11:33.01:0,33,298	0/0:18,0:18:51.02:0,51,467	0/0:14,0:14:39.02:0,39,357	0/0:18,0:18:45.02:0,45,411	0/0:15,0:15:42.02:0,42,384	0/0:16,0:16:36.02:0,36,329	0/0:10,0:10:30.02:0,30,274	1/1:1,6:7:14.83:173,15,0	1/1:1,10:11:27.08:312,27,0	0/0:16,0:16:32.99:0,33,302	0/0:24,0:24:68.99:0,69,623	0/0:28,0:28:68.97:0,69,620	0/0:10,0:10:30.02:0,30,275
chr10	70979304	.	CA	C	851.04	PASS	AB=0.704;AC=11;AF=0.204;AN=54;BaseQRankSum=4.014;DP=419;FS=0.503;HRun=13;HaplotypeScore=49.7941;InbreedingCoeff=0.4903;MQ=73.61;MQ0=2;MQRankSum=-1.649;QD=8.77;ReadPosRankSum=3.530;VQSLOD=2.3250;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,2:19:10.16:0,10,410	0/0:3,0:3:3:0,3,29	0/0:22,0:13:11.49:0,11,202	./.	0/0:25,1:27:46.96:0,47,584	0/1:12,2:14:10.77:11,0,230	0/0:11,3:14:14.15:0,14,299	0/0:29,1:31:43.95:0,44,434	0/0:13,0:13:32.99:0,33,302	0/0:4,1:16:13.07:0,13,174	0/0:7,2:30:18.86:0,19,275	0/1:9,1:10:0.90:1,0,142	1/1:3,7:10:20.86:152,21,0	0/0:9,0:9:21.17:0,21,183	0/0:14,0:14:37.30:0,37,349	0/0:12,0:12:22.99:0,23,282	0/0:22,0:22:56.74:0,57,520	1/1:6,14:21:43.77:312,44,0	0/0:21,2:24:6.11:0,6,388	0/0:12,0:13:32.68:0,33,289	0/0:3,0:3:9:0,9,82	0/0:8,0:8:24.04:0,24,233	0/1:4,5:10:3.66:114,0,4	0/1:2,5:7:14.26:73,0,14	0/0:10,0:11:8.31:0,8,226	1/1:7,9:16:26.83:197,27,0	0/0:22,0:25:53.76:0,54,467	0/1:1,8:9:2.31:148,0,2
chr10	70979393	.	T	TA	455.96	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=-1.631;DP=404;FS=1.940;HRun=10;HaplotypeScore=40.8401;InbreedingCoeff=0.6819;MQ=66.51;MQ0=0;MQRankSum=1.004;QD=11.40;ReadPosRankSum=0.818;VQSLOD=2.2496;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:65.49:0,65,537	0/0:5,0:5:14.96:0,15,119	0/1:8,0:6:17.08:17,0,29	0/1:8,0:6:17.78:18,0,45	0/0:24,0:25:61.93:0,62,496	0/0:19,0:19:53.94:0,54,443	0/0:12,0:12:29.96:0,30,246	0/0:18,0:18:35.93:0,36,292	0/0:9,0:9:26.91:0,27,212	0/0:29,0:29:74.89:0,75,612	0/0:15,0:15:32.96:0,33,271	0/0:15,0:15:44.94:0,45,367	1/1:1,8:9:15.51:157,16,0	0/0:10,0:10:23.95:0,24,197	0/0:16,0:15:38.94:0,39,320	0/0:19,0:19:50.94:0,51,419	0/0:22,0:22:62.91:0,63,514	0/0:7,0:7:17.96:0,18,145	0/0:18,0:18:50.92:0,51,414	0/0:20,0:20:50.93:0,51,419	0/0:7,0:7:17.98:0,18,148	0/0:6,0:6:14.97:0,15,121	1/1:2,9:11:27.07:286,27,0	1/1:1,3:4:12.03:128,12,0	0/0:13,0:13:38.95:0,39,320	0/0:23,0:23:62.93:0,63,517	0/0:27,0:27:37.50:0,37,486	0/0:6,0:6:14.98:0,15,123
chr10	70980285	.	TA	T	831.99	PASS	AB=0.898;AC=17;AF=0.304;AN=56;BaseQRankSum=9.249;DP=596;FS=6.170;HRun=13;HaplotypeScore=74.6516;InbreedingCoeff=0.5372;MQ=73.28;MQ0=4;MQRankSum=-1.576;QD=4.04;ReadPosRankSum=4.570;VQSLOD=0.9195;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:83.99:0,84,787	0/1:12,2:14:4.80:5,0,272	0/0:23,0:11:12.07:0,12,77	0/1:20,1:16:21.81:22,0,60	0/0:27,0:27:57.08:0,57,546	0/0:23,1:26:13.28:0,13,433	0/1:15,5:21:17.81:18,0,315	0/0:25,0:25:43.86:0,44,391	0/0:20,3:23:7.41:0,7,376	0/1:25,1:26:13.72:14,0,197	0/0:21,1:22:17.23:0,17,323	0/0:15,0:17:38.87:0,39,353	1/1:6,10:16:10.69:206,11,0	0/0:11,0:13:4.85:0,5,181	0/0:18,1:20:10.15:0,10,402	0/1:21,3:24:33.48:33,0,355	0/0:24,0:25:64.13:0,64,582	1/1:3,0:12:18.33:53,18,0	0/0:11,1:14:7.94:0,8,212	0/0:30,0:32:63.12:0,63,604	0/0:6,0:19:31.40:0,31,167	0/0:13,0:13:32.96:0,33,305	1/1:5,14:20:40.75:288,41,0	1/1:2,10:12:29.83:219,30,0	0/0:22,1:24:28.13:0,28,416	1/1:3,0:24:28.95:100,29,0	0/0:28,0:32:64.94:0,65,630	1/1:2,0:14:22.39:65,22,0
chr10	70980805	.	CA	C	2285.23	PASS	AB=0.749;AC=18;AF=0.321;AN=56;BaseQRankSum=11.937;DP=649;FS=1.097;HRun=13;HaplotypeScore=75.0551;InbreedingCoeff=0.3145;MQ=72.96;MQ0=0;MQRankSum=-0.534;QD=7.30;ReadPosRankSum=2.764;VQSLOD=2.8276;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:47:77.38:224,77,0	0/0:6,0:6:6.01:0,6,58	0/1:17,1:15:7.87:8,0,50	0/1:15,0:14:8.47:8,0,55	0/0:31,1:34:40.35:0,40,581	0/1:19,4:23:30.56:31,0,376	0/0:20,1:21:32.16:0,32,470	0/0:32,3:37:23.50:0,23,707	0/0:31,0:31:63.06:0,63,597	1/1:9,23:33:70.60:507,71,0	0/1:5,10:16:1.30:137,0,1	0/0:13,0:15:29.81:0,30,257	0/1:9,13:22:2.24:262,0,2	0/0:18,0:18:36:0,36,333	0/0:23,3:26:13.26:0,13,449	0/0:26,2:28:16.26:0,16,477	0/0:26,1:29:31.14:0,31,607	0/1:3,7:11:6.26:114,0,6	0/0:12,1:14:2.06:0,2,171	0/0:19,1:21:25.27:0,25,428	0/1:22,5:27:46.47:46,0,393	0/0:21,0:21:45.96:0,46,440	0/1:10,14:25:10.68:245,0,11	1/1:5,20:26:35.50:413,35,0	0/1:12,2:14:7.77:8,0,252	1/1:5,18:23:11.87:306,12,0	0/0:33,1:35:55.80:0,56,652	0/1:2,9:12:0.31:152,0,0
chr10	70986297	.	AT	A	905.31	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=7.259;DP=552;FS=1.758;HRun=11;HaplotypeScore=56.7834;InbreedingCoeff=0.8529;MQ=73.26;MQ0=0;MQRankSum=-0.882;QD=15.34;ReadPosRankSum=0.634;VQSLOD=4.1173;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.07:0,54,561	0/1:9,0:9:1.83:2,0,171	0/0:14,1:14:29.44:0,29,250	0/0:11,0:9:5.10:0,5,61	0/0:37,2:39:58.96:0,59,1017	0/0:24,0:24:63.12:0,63,646	0/0:6,0:6:15.04:0,15,160	0/0:27,0:28:67.98:0,68,654	0/0:16,0:16:45.08:0,45,459	0/0:29,0:29:62.73:0,63,630	0/0:21,2:23:32.49:0,32,545	0/0:19,0:19:54.12:0,54,563	1/1:0,13:13:32.96:271,33,0	0/0:16,1:17:23.46:0,23,447	0/0:15,0:15:42.09:0,42,439	0/0:24,0:24:41.75:0,42,569	0/0:25,0:26:69.02:0,69,710	0/0:19,0:19:29.30:0,29,444	0/0:21,0:21:54.08:0,54,550	0/0:28,0:30:57.54:0,58,809	0/0:12,0:12:27.05:0,27,279	0/0:10,0:10:27.07:0,27,288	1/1:1,25:26:68.92:567,69,0	1/1:0,9:11:28.05:209,28,0	0/0:22,0:22:43.48:0,43,562	0/0:35,0:35:78.20:0,78,831	0/0:20,0:20:57.13:0,57,601	0/0:9,0:9:24:0,24,235
chr10	70986831	.	C	CA	1807.84	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-8.402;DP=608;FS=15.419;HRun=10;HaplotypeScore=65.1129;InbreedingCoeff=0.8008;MQ=58.47;MQ0=11;MQRankSum=1.862;QD=13.70;ReadPosRankSum=1.916;VQSLOD=2.0621;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,35:40:77.58:1014,78,0	0/0:12,0:12:23.95:0,24,197	0/0:8,0:4:8.97:0,9,72	0/0:15,0:13:25.98:0,26,200	0/0:32,0:31:74.75:0,75,612	0/0:23,0:21:59.93:0,60,492	0/0:19,0:19:47.92:0,48,391	0/0:27,1:27:40.13:0,40,531	0/0:12,0:12:35.91:0,36,286	0/0:22,0:21:50.90:0,51,412	0/0:19,0:19:38.71:0,39,306	0/0:22,0:23:52.95:0,53,421	1/1:17,0:17:6.10:21,6,0	0/0:22,0:22:53.88:0,54,439	0/0:20,0:19:50.92:0,51,416	0/0:21,0:21:56.91:0,57,468	0/0:28,1:29:51.84:0,52,621	0/0:30,1:31:47.33:0,47,591	0/0:25,1:25:30.92:0,31,458	0/0:28,0:28:68.88:0,69,564	0/0:21,0:20:49.97:0,50,400	0/0:25,0:25:53.93:0,54,443	0/1:20,0:19:0.93:1,0,1	1/1:4,0:4:0.47:1,0,0	0/0:15,0:15:41.93:0,42,341	1/1:11,17:27:7.85:494,8,0	0/0:24,0:24:56.91:0,57,466	1/1:6,15:20:1.88:413,2,0
chr10	70988776	.	GTT	G	1260.83	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=4.347;DP=620;FS=1.578;HRun=16;HaplotypeScore=79.9074;InbreedingCoeff=0.7985;MQ=67.52;MQ0=0;MQRankSum=0.432;QD=8.76;ReadPosRankSum=3.092;VQSLOD=1.5246;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:34:39.47:0,39,597	0/0:8,1:11:3.72:0,4,267	0/1:18,0:10:11.10:11,0,54	0/0:11,0:8:6.46:0,6,61	0/0:29,0:31:58.30:0,58,568	0/0:18,0:21:42.88:0,43,468	0/0:20,1:25:18.18:0,18,421	0/0:29,0:34:67.95:0,68,600	0/0:12,0:14:35.94:0,36,363	1/1:9,17:27:22.73:332,23,0	1/1:7,19:29:22.16:276,22,0	0/0:28,0:32:85.10:0,85,827	1/1:4,17:24:44.03:377,44,0	0/0:19,0:19:44.95:0,45,484	0/0:22,0:22:43.88:0,44,460	0/0:21,0:24:58.13:0,58,612	0/0:17,0:21:26.29:0,26,374	0/0:21,0:21:40.83:0,41,460	0/0:22,0:22:51.99:0,52,584	0/0:24,0:23:50.93:0,51,545	0/0:19,0:19:35.73:0,36,352	0/0:10,0:10:27.07:0,27,325	1/1:9,10:23:2.78:138,3,0	1/1:5,15:23:26.56:296,27,0	0/0:17,0:18:46.78:0,47,492	0/0:15,0:18:39.19:0,39,343	0/0:25,0:29:64.77:0,65,680	0/0:13,0:15:32.41:0,32,367
chr10	70990133	.	C	CT	22142.03	PASS	AB=0.900;AC=54;AF=0.964;AN=56;BaseQRankSum=-4.414;DP=552;FS=0.000;HRun=4;HaplotypeScore=91.8270;InbreedingCoeff=-0.0375;MQ=67.91;MQ0=0;MQRankSum=-2.799;QD=40.11;ReadPosRankSum=1.692;VQSLOD=3.4561;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,19:26:66.11:964,66,0	1/1:1,7:8:24.08:358,24,0	0/1:7,0:6:20.58:63,0,21	0/1:12,4:16:58.88:147,0,59	1/1:1,27:28:84.28:1245,84,0	1/1:4,20:24:60.19:876,60,0	1/1:4,17:21:63.17:915,63,0	1/1:2,36:38:99:1499,102,0	1/1:6,10:16:48.03:625,48,0	1/1:3,26:29:81.27:1208,81,0	1/1:0,23:23:66.22:970,66,0	1/1:3,21:24:72.23:1046,72,0	1/1:1,17:18:51.13:739,51,0	1/1:4,10:13:33.07:459,33,0	1/1:0,20:20:57.19:853,57,0	1/1:2,23:25:72.24:1076,72,0	1/1:2,18:20:60.20:884,60,0	1/1:0,13:13:39.13:584,39,0	1/1:2,13:15:45.12:644,45,0	1/1:4,27:31:87.28:1281,87,0	1/1:1,7:8:24.08:358,24,0	1/1:3,18:21:60.16:872,60,0	1/1:2,21:23:66.22:978,66,0	1/1:1,5:6:18.06:268,18,0	1/1:1,18:19:54.18:808,54,0	1/1:0,21:21:63.21:943,63,0	1/1:11,19:29:87.17:1164,87,0	1/1:0,7:7:21.07:314,21,0
chr10	70992880	.	CA	C	3130.35	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=18.365;DP=721;FS=1.081;HRun=1;HaplotypeScore=126.3123;InbreedingCoeff=0.9992;MQ=87.56;MQ0=0;MQRankSum=-15.514;QD=19.32;ReadPosRankSum=1.781;VQSLOD=3.9679;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:66.82:502,67,0	0/0:9,0:9:27.09:0,27,431	0/0:31,0:31:83.37:0,83,1210	0/0:29,0:29:71.63:0,72,1095	0/0:22,0:22:66.22:0,66,1051	0/0:27,0:27:81.28:0,81,1289	0/0:35,0:35:99:0,105,1650	0/0:35,0:35:99:0,102,1624	0/0:30,0:30:87.30:0,87,1390	1/1:3,23:26:77.72:619,78,0	1/1:0,14:14:29.25:237,29,0	0/0:38,0:38:99:0,114,1767	1/1:1,19:20:59.73:478,60,0	0/0:27,0:27:81.26:0,81,1268	0/0:34,0:34:99:0,102,1572	0/0:34,0:34:99:0,102,1602	0/0:30,0:30:90.24:0,90,1362	1/1:1,11:12:29.41:219,29,0	0/0:28,0:28:84.25:0,84,1273	0/0:18,0:18:54.18:0,54,862	0/0:48,0:48:99:0,144,2223	0/0:29,0:29:84.25:0,84,1287	1/1:1,13:14:37.33:285,37,0	1/1:0,11:11:23.83:171,24,0	0/0:28,0:28:84.29:0,84,1338	1/1:0,23:23:68.81:576,69,0	0/0:27,0:27:81.28:0,81,1287	1/1:0,10:10:29.92:258,30,0
chr10	70992882	.	TCCAAGAC	T	8782.07	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=18.193;DP=716;FS=1.934;HRun=0;HaplotypeScore=194.4037;InbreedingCoeff=0.9994;MQ=87.21;MQ0=0;MQRankSum=-15.764;QD=54.21;ReadPosRankSum=1.458;VQSLOD=4.5064;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,25:32:69.23:1369,69,0	0/0:9,0:9:27.09:0,27,1104	0/0:31,0:31:90.31:0,90,3319	0/0:28,0:28:71.41:0,71,2669	0/0:22,0:22:66.21:0,66,2522	0/0:27,0:27:78.27:0,78,3198	0/0:35,0:35:99:0,105,4226	0/0:32,0:32:96.32:0,96,3594	0/0:30,0:30:87.30:0,87,3638	1/1:1,23:24:71.92:1534,72,0	1/1:4,10:14:30.08:583,30,0	0/0:38,0:38:99:0,114,4290	1/1:4,18:22:66.23:1409,66,0	0/0:27,0:27:81.26:0,81,3258	0/0:36,0:36:99:0,108,4285	0/0:33,0:33:99:0,99,3863	0/0:28,0:28:84.29:0,84,3524	1/1:0,11:11:30.10:638,30,0	0/0:26,0:26:78.26:0,78,3153	0/0:21,0:21:63.22:0,63,2510	0/0:49,0:49:99:0,147,5781	0/0:27,0:27:78.25:0,78,3094	1/1:1,13:14:38.49:720,38,0	1/1:2,10:12:27.09:563,27,0	0/0:27,0:27:81.26:0,81,3120	1/1:4,19:23:67.44:1307,67,0	0/0:28,0:28:84.26:0,84,3239	1/1:2,8:10:30.10:659,30,0
chr10	70992889	.	C	CCCT	1755.38	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=12.999;DP=758;FS=0.596;HRun=0;HaplotypeScore=176.9939;InbreedingCoeff=0.8896;MQ=87.17;MQ0=0;MQRankSum=-12.615;QD=9.75;ReadPosRankSum=-1.817;VQSLOD=3.2116;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:13.05:260,13,0	0/0:10,0:10:30.09:0,30,521	0/0:35,0:35:87.28:0,87,1541	0/0:27,0:27:78.23:0,78,1353	0/0:24,0:24:69.19:0,69,1177	0/0:29,0:29:81.28:0,81,1509	0/0:37,0:37:99:0,111,2037	0/0:32,0:32:96.31:0,96,1722	0/0:33,0:33:90.28:0,90,1593	1/1:26,1:27:30.67:328,31,0	1/1:15,0:15:13.73:259,14,0	0/0:41,0:41:99:0,111,1995	1/1:20,2:22:10.92:209,11,0	0/0:29,0:29:84.26:0,84,1502	0/0:35,0:35:99:0,105,1957	0/0:32,0:32:93.32:0,93,1726	0/0:30,0:30:90.29:0,90,1632	1/1:17,0:17:9.80:86,10,0	0/0:27,0:27:78.26:0,78,1425	0/0:24,0:24:72.18:0,72,1236	0/0:48,0:48:99:0,144,2612	0/0:32,0:32:84.26:0,84,1504	1/1:13,1:15:3.07:138,3,0	1/1:13,2:15:10:254,10,0	0/0:26,0:26:78.24:0,78,1393	1/1:23,0:23:29.31:291,29,0	0/0:27,0:27:78.27:0,78,1439	0/1:13,0:13:2:125,0,2
chr10	70993516	.	GA	G	1030.11	PASS	AB=0.917;AC=7;AF=0.125;AN=56;BaseQRankSum=8.613;DP=639;FS=0.000;HRun=10;HaplotypeScore=73.7986;InbreedingCoeff=0.8625;MQ=78.42;MQ0=0;MQRankSum=0.413;QD=12.72;ReadPosRankSum=0.347;VQSLOD=3.4172;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.12:0,60,642	0/0:8,0:8:21.06:0,21,232	0/0:28,1:30:19.79:0,20,382	0/0:16,0:14:4.86:0,5,132	0/0:36,0:39:99:0,108,1129	0/0:21,0:21:53.94:0,54,577	0/0:17,0:17:36.10:0,36,398	0/0:30,0:32:69.32:0,69,726	0/0:16,0:16:45.12:0,45,497	0/0:33,0:33:78.20:0,78,856	0/0:29,1:30:58.18:0,58,870	0/0:16,0:16:42.09:0,42,449	1/1:2,18:20:53.98:469,54,0	0/0:21,0:21:57.15:0,57,626	0/0:26,0:26:69.16:0,69,747	0/0:25,0:25:60.15:0,60,655	0/0:17,0:17:48.13:0,48,531	0/0:16,0:16:39.07:0,39,419	0/1:20,2:22:0.98:1,0,437	0/0:25,0:25:63.14:0,63,679	0/0:9,0:10:29.90:0,30,304	0/0:25,0:25:57.15:0,57,630	1/1:4,23:27:50.65:442,51,0	1/1:2,10:12:29.99:260,30,0	0/0:32,1:33:67.15:0,67,955	0/0:31,1:32:58.69:0,59,858	0/0:38,0:39:99:0,99,1076	0/0:10,0:10:30.08:0,30,332
chr10	70993737	.	A	AAAACAAACAAACAAAC	2597.18	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=-5.918;DP=792;FS=6.115;HRun=0;HaplotypeScore=313.0761;InbreedingCoeff=0.9039;MQ=68.31;MQ0=1;MQRankSum=-5.813;QD=43.29;ReadPosRankSum=-1.842;VQSLOD=2.0144;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,138,4739	0/0:15,0:15:36.12:0,36,1542	0/0:17,0:14:9.66:0,10,214	0/0:24,0:22:6:0,6,119	0/0:35,0:35:81.24:0,81,2844	0/0:15,0:15:33.10:0,33,1264	0/0:27,0:27:43.01:0,43,1312	0/0:38,0:37:51.12:0,51,973	0/0:33,0:33:57.17:0,57,2272	0/0:41,0:41:87.27:0,87,3024	0/0:18,0:18:42.12:0,42,1274	0/0:25,0:25:48.11:0,48,1834	1/1:9,11:30:20.70:1582,21,0	0/0:24,0:24:51.14:0,51,1689	0/0:38,0:38:87.30:0,87,3228	0/0:48,0:48:99:0,111,4099	0/0:31,0:31:63.22:0,63,2261	0/0:12,0:12:13.29:0,13,410	0/0:23,0:23:30.08:0,30,773	0/0:26,0:26:51.17:0,51,1814	0/0:34,0:34:69.21:0,69,2499	0/0:23,0:23:44.97:0,45,1581	1/1:6,17:30:15.52:1132,16,0	./.	0/0:18,0:18:48.15:0,48,1810	0/0:38,0:38:75.23:0,75,2697	0/0:27,0:26:60.20:0,60,2295	0/0:16,0:16:35.99:0,36,732
chr10	70994288	.	GA	G	500.97	PASS	AB=0.798;AC=8;AF=0.143;AN=56;BaseQRankSum=1.276;DP=469;FS=1.240;HRun=15;HaplotypeScore=56.3552;InbreedingCoeff=0.3479;MQ=57.22;MQ0=39;MQRankSum=1.815;QD=4.86;ReadPosRankSum=1.848;VQSLOD=1.5907;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,3:21:4.34:0,4,244	0/0:4,0:5:9.20:0,9,75	0/0:15,0:5:8.22:0,8,59	0/0:15,0:11:2.40:0,2,33	0/0:24,0:25:41.29:0,41,389	0/0:13,0:15:29.83:0,30,251	0/0:12,1:14:12.35:0,12,222	0/0:27,1:34:65.06:0,65,587	0/0:10,0:9:16.21:0,16,127	0/0:11,0:10:20.67:0,21,167	0/1:20,1:21:8.62:9,0,267	0/1:6,2:8:14.70:15,0,122	0/0:17,0:16:35.84:0,36,303	0/0:11,0:10:11.67:0,12,93	0/0:15,0:13:18.34:0,18,138	0/0:6,0:6:9:0,9,79	0/0:23,1:21:29.77:0,30,360	1/1:15,8:24:30.61:185,31,0	0/0:20,0:20:44.52:0,45,347	0/0:14,0:14:33.16:0,33,279	0/0:16,1:15:3.60:0,4,127	0/0:4,0:6:14.64:0,15,100	0/1:6,1:5:12.80:13,0,21	0/0:15,0:11:17.68:0,18,134	0/0:17,1:18:25.33:0,25,307	1/1:7,11:16:32.51:201,33,0	0/0:13,1:12:7.55:0,8,174	0/1:6,15:18:5.38:222,0,5
chr10	70994442	.	A	AATG	1435.07	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=-4.224;DP=355;FS=11.756;HRun=0;HaplotypeScore=47.5013;InbreedingCoeff=0.8770;MQ=67.80;MQ0=1;MQRankSum=-0.450;QD=46.29;ReadPosRankSum=-1.036;VQSLOD=4.2452;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:30.10:0,30,447	0/0:5,0:5:12.04:0,12,179	0/0:21,0:13:11.72:0,12,261	0/0:14,0:11:26.83:0,27,327	0/0:18,0:18:45.15:0,45,673	0/0:18,0:18:45.14:0,45,655	0/0:9,0:9:21.07:0,21,303	0/0:27,0:27:45.14:0,45,654	0/0:7,0:7:18.06:0,18,268	0/0:12,0:11:27.09:0,27,397	0/0:12,0:12:24.08:0,24,359	0/0:12,0:12:33.11:0,33,489	0/0:12,0:12:33.11:0,33,493	0/0:6,0:6:18.06:0,18,269	0/0:11,0:11:24.08:0,24,357	0/0:9,0:9:27.09:0,27,404	0/0:24,0:24:57.10:0,57,743	0/0:20,0:20:51.12:0,51,716	0/0:17,0:17:45.14:0,45,653	0/0:10,0:10:30.10:0,30,449	0/0:7,0:7:9.03:0,9,135	0/0:2,0:2:6.02:0,6,90	0/0:6,0:6:18.06:0,18,269	./.	0/0:24,0:24:66.21:0,66,967	1/1:5,13:18:45.15:880,45,0	0/0:8,0:8:24.07:0,24,329	1/1:1,12:13:33.11:676,33,0
chr10	70994526	.	T	TA	414.63	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-4.372;DP=384;FS=9.684;HRun=11;HaplotypeScore=42.0723;InbreedingCoeff=0.7378;MQ=76.75;MQ0=1;MQRankSum=0.877;QD=10.11;ReadPosRankSum=0.880;VQSLOD=1.3569;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:28.65:0,29,215	0/0:5,0:5:8.96:0,9,70	0/0:7,0:6:2.88:0,3,20	0/1:13,0:11:1.25:1,0,21	0/0:19,0:19:32.81:0,33,252	0/0:18,0:18:50.74:0,51,387	0/0:9,0:10:19.95:0,20,145	0/0:35,1:36:58.95:0,59,623	0/0:9,0:9:20.90:0,21,163	0/0:13,0:13:35.86:0,36,279	0/0:17,0:18:41.77:0,42,319	0/0:13,0:13:20.86:0,21,158	1/1:4,10:14:27.05:274,27,0	0/0:8,0:8:23.91:0,24,186	0/0:12,0:12:29.87:0,30,232	0/0:11,0:11:29.86:0,30,227	0/0:27,0:27:74.69:0,75,580	0/0:18,1:19:29.61:0,30,346	0/0:21,0:21:39.65:0,40,286	0/0:13,0:14:28.88:0,29,209	0/0:12,0:12:29.82:0,30,224	0/0:4,0:4:11.95:0,12,93	1/1:1,9:10:21.04:213,21,0	1/1:1,3:4:4.46:58,4,0	0/0:10,0:10:20.89:0,21,162	0/0:22,1:23:8.37:0,8,248	0/0:6,0:6:14.94:0,15,114	0/0:14,1:15:11.41:0,11,271
chr10	70994915	.	TA	T	383.24	PASS	AB=0.889;AC=7;AF=0.130;AN=54;BaseQRankSum=5.586;DP=405;FS=14.976;HRun=10;HaplotypeScore=41.1129;InbreedingCoeff=0.8326;MQ=60.01;MQ0=1;MQRankSum=2.207;QD=11.61;ReadPosRankSum=-0.818;VQSLOD=0.8988;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.15:0,57,631	0/0:8,0:8:24.05:0,24,258	0/0:5,0:2:5.83:0,6,38	./.	0/0:19,0:19:51.12:0,51,555	0/0:25,0:25:72.19:0,72,789	0/0:7,0:7:18.05:0,18,199	0/0:46,0:45:99:0,107,1166	0/0:5,0:5:15.04:0,15,166	0/0:23,1:24:40.12:0,40,671	0/0:18,0:18:51.14:0,51,563	0/0:18,1:19:22.08:0,22,472	1/1:0,9:9:18:156,18,0	0/0:10,0:10:27.07:0,27,299	0/0:17,0:18:47.96:0,48,512	0/1:7,1:7:2:2,0,200	0/0:23,0:23:66.18:0,66,730	0/0:19,0:19:48.13:0,48,531	0/0:22,0:21:45.59:0,46,498	0/0:11,0:11:21.05:0,21,225	0/0:6,0:6:15.03:0,15,157	0/0:7,0:7:17.82:0,18,151	1/1:0,8:8:20.95:182,21,0	1/1:0,8:8:21:182,21,0	0/0:16,1:17:16.05:0,16,399	0/0:15,1:16:16.05:0,16,398	0/0:12,0:12:30.08:0,30,332	0/0:15,0:15:35.93:0,36,379
chr10	70996867	.	AAC	A	1057.51	PASS	AB=0.915;AC=19;AF=0.352;AN=54;BaseQRankSum=6.037;DP=584;FS=1.141;HRun=0;HaplotypeScore=83.9611;InbreedingCoeff=0.0768;MQ=62.84;MQ0=10;MQRankSum=0.776;QD=3.67;ReadPosRankSum=-0.756;VQSLOD=2.2916;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:32:21.76:0,22,277	0/1:8,1:9:9.97:10,0,269	./.	0/0:30,0:17:3.82:0,4,16	0/1:23,0:23:29.12:29,0,568	0/0:21,0:22:18.98:0,19,442	0/1:19,3:22:34.06:34,0,419	0/0:25,0:24:21.54:0,22,306	0/1:14,2:16:41.02:41,0,283	1/1:11,6:17:18.03:194,18,0	1/1:9,9:18:15.04:170,15,0	0/0:22,1:24:9:0,9,720	0/0:16,0:14:11.92:0,12,90	0/0:21,2:22:17.12:0,17,690	0/0:18,0:18:19.04:0,19,281	0/1:20,3:22:29.01:29,0,432	0/1:16,1:17:4.02:4,0,402	0/0:11,0:21:14.94:0,15,121	0/1:17,0:17:8.10:8,0,218	0/1:23,2:25:22.96:23,0,522	0/0:26,0:25:2.20:0,2,442	0/1:18,2:19:3.97:4,0,357	0/0:21,0:18:4.79:0,5,28	0/0:20,0:20:11.87:0,12,82	0/1:18,3:21:25.97:26,0,488	1/1:9,11:20:36.08:392,36,0	0/1:21,4:25:31.91:32,0,359	1/1:5,8:14:23.71:232,24,0
chr10	70998275	.	CA	C	3855.86	PASS	AB=0.919;AC=22;AF=0.393;AN=56;BaseQRankSum=10.065;DP=609;FS=6.727;HRun=11;HaplotypeScore=68.4210;InbreedingCoeff=0.7351;MQ=63.92;MQ0=7;MQRankSum=0.947;QD=13.12;ReadPosRankSum=2.561;VQSLOD=3.6357;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,35:41:58.75:684,59,0	0/0:10,0:11:29.91:0,30,302	0/1:28,1:17:6.23:6,0,153	0/0:27,0:10:4.42:0,4,90	0/0:21,0:23:56.94:0,57,577	0/0:16,0:16:39.04:0,39,395	0/0:16,1:17:11.39:0,11,312	0/0:26,2:28:13.87:0,14,559	0/1:16,2:18:4.30:4,0,354	1/1:1,17:18:47.92:391,48,0	1/1:4,20:24:53.91:443,54,0	0/0:23,0:23:57.11:0,57,591	1/1:3,10:13:26.95:219,27,0	0/1:17,2:20:24.29:24,0,337	0/0:28,2:30:29.86:0,30,610	0/0:19,0:20:56.97:0,57,582	0/0:27,1:30:50.20:0,50,683	1/1:4,18:22:37.27:423,37,0	0/0:19,0:18:39.05:0,39,396	0/0:13,0:13:32.19:0,32,354	0/0:15,0:16:35.32:0,35,382	0/0:21,0:21:15.29:0,15,421	1/1:2,22:24:59.80:492,60,0	1/1:3,26:29:56.93:468,57,0	0/1:16,2:18:1.18:1,0,391	1/1:6,20:28:41.23:479,41,0	0/0:18,0:18:42.03:0,42,424	1/1:1,9:10:26.96:222,27,0
chr10	71002331	.	ATGTC	A	6779.90	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.491;DP=704;FS=3.122;HRun=0;HaplotypeScore=115.9740;InbreedingCoeff=0.9963;MQ=75.82;MQ0=0;MQRankSum=-2.943;QD=34.95;ReadPosRankSum=3.365;VQSLOD=4.9513;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,28:32:66.23:1098,66,0	0/0:7,0:7:15.05:0,15,366	0/0:28,0:28:42.14:0,42,984	0/0:32,0:29:33.11:0,33,752	0/0:24,0:24:63.22:0,63,1547	0/0:17,0:17:45.15:0,45,1110	0/0:18,0:18:48.15:0,48,1131	0/0:32,0:32:57.18:0,57,1303	0/0:28,0:28:78.27:0,78,1876	1/1:4,15:19:42.14:699,42,0	1/1:5,14:19:39.09:619,39,0	0/0:27,0:27:63.20:0,63,1504	1/1:3,19:22:54.18:899,54,0	0/0:33,0:33:69.24:0,69,1677	0/0:33,0:33:78.25:0,78,1873	0/0:39,0:39:99:0,99,2343	0/0:31,0:31:75.26:0,75,1816	1/1:6,21:27:63.22:1049,63,0	0/0:26,0:26:51.18:0,51,1258	0/0:24,0:24:63.19:0,63,1450	0/0:31,0:31:84.29:0,84,2071	0/0:25,0:25:51.14:0,51,1158	1/1:6,12:18:21.07:350,21,0	1/1:3,10:14:21.96:352,22,0	0/0:18,0:18:48.16:0,48,1184	1/1:5,22:27:66.18:1063,66,0	0/0:36,0:36:99:0,99,2338	1/1:3,13:16:39.13:649,39,0
chr10	71007380	.	G	GA	5483.99	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-11.658;DP=673;FS=1.528;HRun=6;HaplotypeScore=63.1095;InbreedingCoeff=0.9986;MQ=82.50;MQ0=0;MQRankSum=-1.751;QD=32.26;ReadPosRankSum=2.754;VQSLOD=5.2959;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:84.27:1057,84,0	0/0:16,0:16:48.07:0,48,479	0/0:25,0:25:50.81:0,51,530	0/0:17,0:17:42.07:0,42,413	0/0:29,0:29:81.18:0,81,826	0/0:30,0:30:81.18:0,81,824	0/0:14,0:14:36.06:0,36,359	0/0:36,0:36:93.19:0,93,939	0/0:23,0:23:69.16:0,69,703	1/1:2,34:36:99:1231,99,0	1/1:2,14:16:42.13:520,42,0	0/0:30,0:30:78.17:0,78,795	1/1:1,16:17:42.13:528,42,0	0/0:29,0:29:78.16:0,78,790	0/0:32,0:32:96.22:0,96,978	0/0:24,0:24:72.13:0,72,725	0/0:32,0:32:87.16:0,87,878	0/0:21,0:21:63.10:0,63,631	0/0:18,0:18:51.10:0,51,514	0/0:29,0:29:78.16:0,78,789	0/0:20,0:20:54.12:0,54,551	0/0:25,0:25:72.15:0,72,727	1/1:2,17:19:51.16:634,51,0	1/1:1,17:18:42.13:528,42,0	0/0:20,0:20:54.12:0,54,549	1/1:4,20:24:63.17:760,63,0	0/0:33,0:33:93.19:0,93,941	1/1:0,7:7:18.06:226,18,0
chr10	71011563	.	TA	T	741.37	PASS	AB=0.828;AC=18;AF=0.321;AN=56;BaseQRankSum=9.494;DP=555;FS=0.000;HRun=15;HaplotypeScore=71.8956;InbreedingCoeff=0.6628;MQ=70.75;MQ0=1;MQRankSum=0.329;QD=3.73;ReadPosRankSum=3.573;VQSLOD=0.3166;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:20:35.26:230,35,0	0/1:12,2:15:1.44:1,0,98	0/0:16,0:10:5.36:0,5,31	0/0:10,0:8:8.91:0,9,66	0/0:17,0:19:26.70:0,27,202	0/1:11,2:16:5.40:5,0,177	0/0:19,0:19:23.98:0,24,208	0/0:29,1:35:59.52:0,60,475	0/0:8,0:8:20.89:0,21,171	1/1:5,1:25:38.78:123,39,0	1/1:7,0:22:24.53:71,25,0	0/0:25,2:27:16.67:0,17,255	0/1:9,9:18:20.90:123,0,21	0/0:20,0:20:32.94:0,33,278	0/0:28,3:31:47.91:0,48,406	0/0:23,1:26:31.42:0,31,367	0/0:20,2:22:34.70:0,35,422	0/0:21,0:21:41.97:0,42,362	0/0:14,0:17:40.34:0,40,321	0/0:21,3:26:16.61:0,17,257	0/0:11,0:11:12.47:0,12,107	0/0:13,0:13:21:0,21,185	1/1:4,11:15:8.52:168,9,0	1/1:4,3:7:5.79:38,6,0	0/0:33,2:35:33.47:0,33,540	1/1:9,1:28:34.64:110,35,0	0/1:18,3:21:8.57:9,0,174	1/1:2,0:12:18.30:53,18,0
chr10	71014390	.	TTTG	T	2389.55	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=1.538;DP=735;FS=2.044;HRun=0;HaplotypeScore=110.1269;InbreedingCoeff=0.2583;MQ=62.56;MQ0=13;MQRankSum=-2.288;QD=12.85;ReadPosRankSum=-8.242;VQSLOD=0.9911;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:43.03:264,0,43	0/0:7,0:7:9.14:0,9,223	0/0:70,0:20:3.31:0,3,284	0/0:56,0:12:5.98:0,6,78	0/0:33,0:32:95.94:0,96,1238	0/0:31,0:31:77.98:0,78,1105	0/0:15,0:15:18.98:0,19,471	0/0:39,0:39:99:0,107,1211	0/0:13,0:13:38.13:0,38,534	1/1:33,2:34:97.24:942,97,0	1/1:28,2:30:67.66:731,68,0	0/0:24,0:24:65.98:0,66,954	0/1:21,0:21:58.99:59,0,212	0/0:15,0:15:34.21:0,34,429	0/0:34,0:33:90.04:0,90,1228	0/0:27,0:26:66.90:0,67,935	0/0:23,0:22:39.99:0,40,766	0/0:18,0:18:50.81:0,51,665	0/0:24,0:24:70.53:0,71,934	0/0:36,0:35:88.39:0,88,1444	0/0:7,0:7:17.90:0,18,207	0/0:18,0:18:46.30:0,46,654	0/1:14,0:13:69.01:70,0,69	0/1:13,0:13:8.67:59,0,9	0/0:29,0:29:57.35:0,57,817	0/1:27,0:27:30.85:318,0,31	0/0:30,0:30:80.91:0,81,1128	0/1:15,0:13:12.25:103,0,12
chr10	71014391	.	TTG	T	3106.36	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=1.898;DP=729;FS=0.338;HRun=0;HaplotypeScore=94.5928;InbreedingCoeff=0.6726;MQ=61.91;MQ0=13;MQRankSum=-2.154;QD=11.17;ReadPosRankSum=-7.706;VQSLOD=1.6582;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:30,1:31:46.89:551,47,0	0/1:7,0:7:1.44:1,0,163	0/1:70,0:20:16.59:17,0,208	0/0:54,0:11:5.75:0,6,68	0/0:33,0:32:95.15:0,95,982	0/0:29,0:29:77.48:0,77,840	0/1:15,0:15:1:1,0,342	0/0:40,0:40:99:0,103,1010	0/0:13,0:13:37.83:0,38,406	1/1:34,1:34:99:971,102,0	1/1:25,5:30:81.30:840,81,0	0/0:24,0:24:65.19:0,65,750	0/1:21,0:21:69.03:73,0,69	0/0:15,0:15:23.11:0,23,321	0/0:33,0:32:89.88:0,90,988	0/0:26,0:25:66.72:0,67,745	0/0:22,0:21:41.72:0,42,618	0/0:18,0:18:50.56:0,51,533	0/0:24,0:24:66.46:0,66,734	0/0:36,0:35:69.56:0,70,1107	0/0:6,0:6:17.67:0,18,166	0/0:18,0:18:45.80:0,46,514	1/1:14,0:13:0.28:103,0,0	1/1:13,0:13:17.18:103,17,0	0/0:29,0:29:53.61:0,54,607	1/1:27,0:27:41.43:468,41,0	0/0:30,0:30:80.08:0,80,884	1/1:15,0:13:25.73:167,26,0
chr10	71014393	.	G	GT	291.88	PASS	AB=0.947;AC=17;AF=0.304;AN=56;BaseQRankSum=4.026;DP=720;FS=1.690;HRun=14;HaplotypeScore=92.7739;InbreedingCoeff=0.0614;MQ=61.89;MQ0=13;MQRankSum=-2.459;QD=0.74;ReadPosRankSum=-2.725;VQSLOD=-0.6657;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:21.94:22,0,43	0/0:7,0:7:14.08:0,14,95	0/1:70,0:21:13.86:14,0,40	0/1:54,0:10:0.20:1,0,0	0/1:31,2:32:67.51:68,0,258	0/1:25,2:31:9.90:10,0,242	0/1:14,1:16:19.75:20,0,129	0/0:35,0:37:45.18:0,45,291	0/0:11,1:13:2.27:0,2,132	0/0:34,0:33:11.52:0,12,38	0/0:28,0:28:0.74:0,1,39	0/1:20,4:24:77.74:78,0,189	1/1:21,0:21:12.24:32,12,0	0/0:10,4:15:2.23:0,2,129	0/0:29,3:32:34.91:0,35,340	0/1:19,4:24:1.03:1,0,231	0/0:20,0:20:22.07:0,22,234	0/1:15,1:17:11.25:11,0,128	0/0:24,0:24:52.20:0,52,329	0/0:34,1:35:9.23:0,9,385	0/0:5,0:6:10.90:0,11,63	0/0:14,1:18:11.97:0,12,178	1/1:13,0:12:17.76:98,18,0	1/1:13,0:12:7.81:53,8,0	0/1:27,1:29:3.31:3,0,230	0/0:25,0:25:13.27:0,13,58	0/0:25,1:29:6.51:0,7,286	0/1:16,0:14:15.28:38,0,15
chr10	71016620	.	TA	T	474.27	PASS	AB=0.958;AC=4;AF=0.071;AN=56;BaseQRankSum=4.823;DP=509;FS=0.000;HRun=11;HaplotypeScore=55.1255;InbreedingCoeff=0.3881;MQ=62.07;MQ0=1;MQRankSum=0.589;QD=8.47;ReadPosRankSum=1.558;VQSLOD=1.8910;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:68.92:566,69,0	0/0:5,0:6:14.87:0,15,142	0/1:16,0:8:4.48:4,0,43	0/0:15,0:12:15.92:0,16,106	0/0:29,0:29:81.19:0,81,848	0/0:17,0:17:42.06:0,42,429	0/0:9,0:9:21.02:0,21,213	0/0:31,0:32:68.32:0,68,749	0/1:10,1:11:6.60:7,0,142	0/0:24,0:24:57.14:0,57,607	0/0:27,2:28:47.54:0,48,709	0/0:17,0:17:42.09:0,42,441	0/0:25,3:29:35.15:0,35,550	0/0:12,0:12:30.08:0,30,320	0/0:23,0:22:57.14:0,57,608	0/0:19,0:19:50.69:0,51,506	0/0:18,0:18:48.04:0,48,489	0/0:21,0:21:45.11:0,45,479	0/0:15,1:16:2.32:0,2,206	0/0:21,0:22:62.99:0,63,654	0/0:3,0:3:6.02:0,6,64	0/0:3,0:3:3.01:0,3,32	0/0:9,0:9:21.04:0,21,216	0/0:9,0:9:15.04:0,15,160	0/0:23,1:24:38.50:0,38,604	0/0:20,1:21:26.47:0,26,481	0/0:29,0:30:75.01:0,75,775	0/0:16,0:16:45.11:0,45,479
chr10	71018443	.	CT	C	246.03	PASS	AB=0.929;AC=4;AF=0.071;AN=56;BaseQRankSum=5.502;DP=694;FS=1.620;HRun=12;HaplotypeScore=76.0540;InbreedingCoeff=0.4417;MQ=65.19;MQ0=0;MQRankSum=0.868;QD=5.13;ReadPosRankSum=1.111;VQSLOD=2.1231;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:83.17:0,83,796	0/0:10,0:10:27.05:0,27,272	0/1:10,0:9:25.63:26,0,81	0/1:14,1:14:36.56:37,0,150	0/0:29,2:31:46.30:0,46,621	0/0:28,0:28:66.99:0,67,381	0/0:24,0:25:53.94:0,54,532	0/0:40,0:42:89.86:0,90,866	0/0:19,0:19:45.07:0,45,444	0/0:24,0:25:42.08:0,42,426	0/0:16,0:17:36.01:0,36,347	0/0:33,0:34:57.02:0,57,693	0/0:26,0:26:63.04:0,63,603	0/0:25,0:25:69.11:0,69,688	0/0:40,2:42:78.95:0,79,972	0/0:21,0:21:51.08:0,51,506	0/0:17,1:18:15.84:0,16,342	1/1:6,15:21:38.82:299,39,0	0/0:16,0:18:44.91:0,45,431	0/0:32,0:35:77.84:0,78,737	0/0:32,2:34:28.64:0,29,640	0/0:21,0:22:59.92:0,60,573	0/0:22,0:22:48.07:0,48,471	0/0:23,0:24:59.75:0,60,574	0/0:34,0:34:84.09:0,84,828	0/0:24,0:24:25.34:0,25,435	0/0:32,0:32:81.11:0,81,807	0/0:4,0:4:9.02:0,9,91
chr10	71021492	.	C	CT	1992.40	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.540;DP=824;FS=0.542;HRun=1;HaplotypeScore=77.4727;InbreedingCoeff=0.9708;MQ=85.43;MQ0=0;MQRankSum=-2.801;QD=38.32;ReadPosRankSum=-1.407;VQSLOD=3.6034;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,160,2063	0/0:14,0:14:39.11:0,39,492	0/0:34,0:34:98.64:0,99,1190	0/0:28,0:28:78.25:0,78,994	0/0:21,0:21:60.18:0,60,765	0/0:21,0:21:54.14:0,54,671	0/0:26,0:26:78.25:0,78,1013	0/0:44,0:44:99:0,123,1586	0/0:31,0:31:93.30:0,93,1208	1/1:1,35:36:99:1530,105,0	1/1:1,15:16:39.13:584,39,0	0/0:33,0:33:99:0,99,1271	0/0:32,0:32:96.31:0,96,1246	0/0:26,0:26:78.23:0,78,997	0/0:54,0:54:99:0,157,2026	0/0:33,0:33:99:0,99,1271	0/0:43,0:43:99:0,126,1635	0/0:27,0:27:75.24:0,75,973	0/0:18,0:18:48.16:0,48,624	0/0:31,0:31:93.30:0,93,1207	0/0:38,0:38:99:0,105,1348	0/0:32,0:32:93.30:0,93,1207	0/0:22,0:22:63.20:0,63,818	0/0:17,0:17:51.17:0,51,662	0/0:25,0:25:75.22:0,75,957	0/0:28,0:28:84.26:0,84,1066	0/0:35,0:35:99:0,105,1344	0/0:3,0:3:9.03:0,9,117
chr10	71022080	.	TTC	T	3944.43	PASS	AB=0.516;AC=5;AF=0.089;AN=56;BaseQRankSum=12.178;DP=697;FS=2.454;HRun=0;HaplotypeScore=83.6132;InbreedingCoeff=0.7798;MQ=84.18;MQ0=0;MQRankSum=-3.270;QD=41.52;ReadPosRankSum=2.283;VQSLOD=5.4293;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,55:55:99:2389,157,0	0/0:17,0:17:45.15:0,45,869	0/0:25,0:25:72.21:0,72,1264	0/0:16,0:16:45.15:0,45,814	0/0:37,0:37:99:0,105,1970	0/0:30,0:30:87.30:0,87,1649	0/0:15,0:15:42.14:0,42,794	0/0:30,0:30:84.28:0,84,1568	0/0:19,0:19:57.20:0,57,1101	0/0:31,0:31:93.32:0,93,1759	0/0:25,0:25:75.24:0,75,1396	0/0:26,0:26:75.26:0,75,1449	0/0:21,0:21:60.21:0,60,1139	0/0:27,0:27:78.25:0,78,1474	0/0:22,0:22:66.23:0,66,1275	0/0:25,0:24:75.26:0,75,1449	0/0:24,0:24:72.25:0,72,1391	0/0:22,0:22:66.20:0,66,1240	0/0:21,0:21:63.21:0,63,1131	0/0:28,0:28:84.29:0,84,1616	0/0:25,0:25:75.26:0,75,1431	0/0:21,0:21:63.22:0,63,1211	0/0:32,0:32:96.33:0,96,1854	0/0:22,0:22:66.23:0,66,1259	0/0:19,0:19:57.20:0,57,1101	0/1:2,30:32:22.65:1234,0,23	0/0:22,0:22:66.23:0,66,1258	1/1:1,7:8:21.07:322,21,0
chr10	71025657	.	C	CA	2562.83	PASS	AB=0.923;AC=11;AF=0.196;AN=56;BaseQRankSum=-7.098;DP=643;FS=0.841;HRun=10;HaplotypeScore=74.9985;InbreedingCoeff=0.9074;MQ=80.43;MQ0=0;MQRankSum=0.111;QD=18.98;ReadPosRankSum=-2.246;VQSLOD=3.5728;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:63.16:672,63,0	0/1:11,1:12:5.06:5,0,165	0/0:22,0:21:31.47:0,31,245	0/0:14,0:16:30.36:0,30,208	0/0:20,0:20:41.91:0,42,345	0/0:23,0:23:50.92:0,51,419	0/0:22,1:23:25.04:0,25,405	0/0:28,1:29:30.41:0,30,443	0/0:21,0:21:53.93:0,54,443	1/1:6,25:33:28.61:668,29,0	1/1:7,14:22:41.85:404,42,0	0/0:13,0:13:29.95:0,30,246	0/0:23,0:23:62.88:0,63,512	0/0:27,0:27:71.86:0,72,585	0/0:20,1:21:15.95:0,16,337	0/0:19,0:20:52.89:0,53,417	0/0:38,0:38:99:0,102,833	0/0:19,1:20:24.95:0,25,411	0/0:17,0:17:35.82:0,36,284	0/0:35,0:35:74.98:0,75,611	0/0:27,0:27:77.90:0,78,640	0/0:29,0:29:43.18:0,43,512	0/0:19,0:19:37.62:0,38,313	0/0:18,0:18:24.59:0,25,346	0/0:16,0:17:31.96:0,32,252	1/1:2,27:30:56.37:752,56,0	0/0:28,0:29:70.94:0,71,572	1/1:0,8:9:23.89:238,24,0
chr10	71028737	.	TAAAAAC	T	4953.72	PASS	AB=0.512;AC=9;AF=0.161;AN=56;BaseQRankSum=12.910;DP=749;FS=3.332;HRun=0;HaplotypeScore=159.0843;InbreedingCoeff=0.8591;MQ=83.34;MQ0=0;MQRankSum=-12.096;QD=47.63;ReadPosRankSum=2.037;VQSLOD=4.9953;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,147,4807	0/0:5,0:5:15.05:0,15,530	0/0:21,0:21:33.49:0,33,1217	0/0:27,0:28:77.82:0,78,2128	0/0:29,0:29:84.25:0,84,2771	0/0:21,0:21:63.22:0,63,2179	0/0:27,0:27:75.19:0,75,2129	0/0:38,0:38:99:0,99,3265	0/0:22,0:22:63.22:0,63,2102	0/0:34,0:34:96.32:0,96,3136	0/0:28,0:28:78.25:0,78,2633	0/0:23,0:23:69.21:0,69,2279	1/1:1,28:29:66.23:1512,66,0	0/0:22,0:22:66.23:0,66,2263	0/0:31,0:31:84.29:0,84,2854	0/0:24,0:24:66.23:0,66,2243	0/0:35,0:35:96.33:0,96,3392	0/0:30,0:30:90.30:0,90,3100	0/0:27,0:27:75.26:0,75,2536	0/0:25,0:25:69.23:0,69,2330	0/0:35,0:35:99:0,99,3250	0/0:25,0:25:66.22:0,66,2144	1/1:1,26:27:62.53:1359,63,0	1/1:2,19:21:23.97:501,24,0	0/0:26,0:26:78.25:0,78,2539	0/1:1,21:22:29.27:1241,0,29	0/0:36,0:36:99:0,105,3445	1/1:0,5:5:15.05:341,15,0
chr10	71030155	.	ATCCT	A	3209.10	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.090;DP=736;FS=3.135;HRun=0;HaplotypeScore=125.4739;InbreedingCoeff=0.9985;MQ=85.28;MQ0=0;MQRankSum=-8.200;QD=47.90;ReadPosRankSum=2.325;VQSLOD=4.6808;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:45.15:898,45,0	0/0:7,0:7:21.07:0,21,583	0/0:29,0:30:90.28:0,90,2346	0/0:19,0:19:54.16:0,54,1368	0/0:23,0:23:69.24:0,69,1883	0/0:20,0:20:60.21:0,60,1735	0/0:34,0:34:99:0,99,2718	0/0:48,0:48:99:0,141,3906	0/0:25,0:25:72.25:0,72,2063	0/0:22,0:22:66.23:0,66,1887	0/0:16,0:16:48.16:0,48,1386	0/0:33,0:33:99:0,99,2715	0/0:31,0:31:93.32:0,93,2622	0/0:27,0:27:81.28:0,81,2303	0/0:26,0:26:78.27:0,78,2208	0/0:29,0:29:87.30:0,87,2499	0/0:29,0:29:87.30:0,87,2481	0/0:31,0:31:93.32:0,93,2662	0/0:26,0:26:78.27:0,78,2217	0/0:18,0:18:54.19:0,54,1561	0/0:43,0:43:99:0,126,3555	0/0:31,0:31:93.32:0,93,2572	0/0:23,0:23:66.21:0,66,1808	0/0:37,0:36:99:0,111,3153	0/0:13,0:13:39.13:0,39,1095	1/1:0,24:24:63.22:1256,63,0	0/0:28,0:28:84.29:0,84,2379	1/1:0,21:21:60.21:1198,60,0
chr10	71030171	.	T	TA	1434.57	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.121;DP=699;FS=4.141;HRun=1;HaplotypeScore=89.5572;InbreedingCoeff=0.9913;MQ=88.25;MQ0=0;MQRankSum=-0.288;QD=37.75;ReadPosRankSum=0.347;VQSLOD=3.9262;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.10:0,45,564	0/0:5,0:5:15.02:0,15,178	0/0:32,0:32:90.25:0,90,1112	0/0:22,0:22:63.08:0,63,759	0/0:19,0:19:54.16:0,54,686	0/0:20,0:20:60.18:0,60,760	0/0:31,0:31:90.22:0,90,1106	0/0:40,0:40:99:0,117,1495	0/0:18,0:18:54.18:0,54,700	1/1:2,16:18:51.14:709,51,0	1/1:1,19:20:57.19:848,57,0	0/0:30,0:30:90.29:0,90,1169	0/0:35,0:35:99:0,102,1292	0/0:29,0:29:87.16:0,87,1091	0/0:22,0:22:66.21:0,66,857	0/0:33,0:33:96.29:0,96,1218	0/0:30,0:30:87.23:0,87,1096	0/0:33,0:33:96.20:0,96,1177	0/0:24,0:24:72.23:0,72,934	0/0:16,0:16:45.11:0,45,541	0/0:38,0:38:99:0,108,1385	0/0:30,0:30:78.25:0,78,1010	0/0:18,0:18:54.17:0,54,690	0/0:36,0:36:99:0,108,1374	0/0:10,0:10:27.09:0,27,350	0/0:24,0:24:69.19:0,69,876	0/0:27,0:27:78.25:0,78,1000	0/0:22,0:22:66.20:0,66,841
chr10	71031381	.	TTCCTCCGCCA	T	3389.71	PASS	AB=0.579;AC=5;AF=0.089;AN=56;BaseQRankSum=9.417;DP=653;FS=0.599;HRun=0;HaplotypeScore=191.3014;InbreedingCoeff=0.7844;MQ=92.60;MQ0=0;MQRankSum=-8.831;QD=45.20;ReadPosRankSum=-0.814;VQSLOD=2.7891;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,26:33:36.59:1013,37,0	0/0:16,0:16:42.13:0,42,1931	0/0:27,0:27:72.25:0,72,3194	0/0:31,0:31:75.26:0,75,2902	0/0:30,0:30:81.23:0,81,3852	0/0:21,0:21:63.22:0,63,3123	0/0:25,0:25:71.98:0,72,3388	0/0:25,0:25:72.25:0,72,3439	0/0:13,0:13:36.12:0,36,1759	0/0:19,0:19:54.19:0,54,2336	0/0:20,0:20:45.15:0,45,2197	0/0:30,0:30:87.28:0,87,4343	0/0:14,0:14:42.14:0,42,2184	0/0:20,0:20:54.19:0,54,2603	0/0:22,0:22:66.23:0,66,3109	0/0:22,0:22:60.21:0,60,3094	0/0:18,0:18:54.16:0,54,2515	0/0:25,0:25:72.25:0,72,3574	0/0:24,0:24:63.20:0,63,2971	0/0:11,0:11:30.10:0,30,1337	0/0:71,0:71:99:0,202,10033	0/0:13,0:13:36.12:0,36,1474	0/0:15,0:15:45.15:0,45,1987	0/0:22,0:22:63.22:0,63,3100	0/0:20,0:20:45.15:0,45,2223	0/1:9,24:33:14.75:1798,0,15	0/0:24,0:23:69.24:0,69,3378	1/1:1,8:9:18.06:579,18,0
chr10	71032594	.	AGT	A	87.78	PASS	AB=0.943;AC=18;AF=0.391;AN=46;BaseQRankSum=3.981;DP=783;FS=10.507;HRun=0;HaplotypeScore=106.5205;InbreedingCoeff=0.0807;MQ=65.06;MQ0=31;MQRankSum=-1.238;QD=0.23;ReadPosRankSum=1.969;VQSLOD=1.5716;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:52,0:52:2.84:14,3,0	0/0:10,0:10:6.02:0,6,87	./.	./.	0/1:31,3:34:8.18:8,0,252	0/0:15,0:14:3.01:0,3,44	0/1:19,3:22:26.22:26,0,38	./.	0/1:21,0:21:10.45:10,0,120	0/0:31,0:31:36.36:0,36,345	0/0:19,0:19:18.02:0,18,198	0/0:37,0:37:12.35:0,12,176	1/1:27,0:26:10.74:49,11,0	0/0:24,0:24:12.02:0,12,149	0/1:24,2:28:17.22:17,0,161	0/0:29,0:29:20.77:0,21,237	0/1:33,0:32:13.07:13,0,196	0/0:12,0:24:9.28:0,9,61	1/1:13,0:11:2.84:14,3,0	0/1:22,0:21:11.32:11,0,113	0/1:52,0:50:16.97:17,0,158	0/0:18,0:18:12.03:0,12,143	1/1:21,0:20:5.64:28,6,0	./.	0/1:23,4:26:11.31:11,0,215	1/1:25,0:24:2.84:14,3,0	0/0:23,0:23:6.02:0,6,89	./.
chr10	71032624	.	TGTGTGTGTGTGTGTGTGTAC	T	432.95	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=3.229;DP=677;FS=0.000;HRun=0;HaplotypeScore=256.9303;InbreedingCoeff=0.3379;MQ=51.51;MQ0=39;MQRankSum=-1.485;QD=6.01;ReadPosRankSum=-2.303;VQSLOD=1.6545;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:6.02:313,6,0	0/0:11,0:11:24.07:0,24,1307	0/0:21,0:4:12.04:0,12,235	0/0:38,0:9:27.09:0,27,508	0/0:30,0:30:69.24:0,69,4505	0/0:7,0:6:18.06:0,18,1280	0/0:21,0:20:45.14:0,45,2668	0/0:25,0:22:66.22:0,66,2206	0/0:27,0:27:66.23:0,66,4020	0/0:29,0:29:25.18:0,25,3776	0/0:16,0:16:33.11:0,33,1647	0/0:39,0:38:82.50:0,82,4284	0/1:19,0:18:99:149,0,434	0/0:29,0:29:69.26:0,69,4026	0/0:30,0:30:67.36:0,67,3957	0/0:34,0:34:91.25:0,91,5345	0/0:31,0:29:76.18:0,76,4450	0/0:22,0:20:36.12:0,36,2120	0/0:12,0:11:24.70:0,25,515	0/0:22,0:21:51.15:0,51,2789	0/0:46,0:43:93.30:0,93,4924	0/0:21,0:21:51.17:0,51,2632	0/0:25,0:24:17.22:0,17,265	0/0:21,0:20:6.02:0,6,128	0/0:26,0:26:60.26:0,60,4021	0/1:20,0:19:76.16:76,0,685	0/0:14,0:14:31.52:0,32,1224	0/0:8,0:8:15.05:0,15,335
chr10	71032632	.	TGTGTGTGTGTAC	T	1322.49	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=6.294;DP=629;FS=6.832;HRun=0;HaplotypeScore=166.0994;InbreedingCoeff=0.7107;MQ=54.50;MQ0=31;MQRankSum=-0.886;QD=8.88;ReadPosRankSum=0.646;VQSLOD=2.0460;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:32:6.02:162,6,0	0/0:10,0:10:21.03:0,21,683	0/0:24,0:12:24.13:0,24,564	0/0:38,0:15:44.82:0,45,687	0/0:28,0:28:66.22:0,66,2554	0/0:7,0:7:21.07:0,21,770	0/0:20,0:19:42.14:0,42,1575	0/0:23,0:21:59.55:0,60,1060	0/0:29,0:29:72.23:0,72,2441	0/1:26,0:26:52.32:52,0,1712	0/1:14,0:14:15.78:16,0,669	0/0:34,0:33:63.18:0,63,2098	1/1:5,10:14:12.04:423,12,0	0/0:28,0:28:66.82:0,67,2261	0/0:28,0:28:65.10:0,65,2350	0/0:31,0:31:84.76:0,85,2912	0/0:30,0:28:72.19:0,72,2492	0/0:22,0:20:34.93:0,35,1163	0/0:10,0:10:23.60:0,24,320	0/0:20,0:19:45.15:0,45,1678	0/0:42,0:39:87.24:0,87,2871	0/0:21,0:21:51.17:0,51,1539	1/1:2,18:19:6.43:237,6,0	1/1:19,0:19:2.77:44,3,0	0/0:21,0:21:50.83:0,51,2150	1/1:1,9:10:26.88:458,27,0	0/0:14,0:14:30.57:0,31,766	1/1:11,0:11:9.02:103,9,0
chr10	71032642	.	TAC	T	1197.92	PASS	AB=0.528;AC=15;AF=0.268;AN=56;BaseQRankSum=7.209;DP=554;FS=4.758;HRun=0;HaplotypeScore=72.8574;InbreedingCoeff=0.8945;MQ=65.38;MQ0=19;MQRankSum=-1.652;QD=9.14;ReadPosRankSum=1.650;VQSLOD=3.0542;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:32:3.42:29,3,0	0/0:9,0:9:18.06:0,18,300	0/0:24,0:19:45.18:0,45,908	0/0:34,0:22:59.77:0,60,859	0/0:19,0:19:44.74:0,45,713	0/0:7,0:7:21.07:0,21,357	0/0:18,0:17:35.91:0,36,568	0/0:29,0:28:78.70:0,79,1304	0/0:24,0:24:62.01:0,62,949	1/1:18,1:19:49.13:555,49,0	1/1:10,0:10:12.59:157,13,0	0/0:24,0:23:44.83:0,45,741	1/1:12,0:12:11.99:106,12,0	0/0:21,0:21:44.86:0,45,696	0/0:30,0:30:72.14:0,72,1148	0/0:26,0:26:69.24:0,69,1141	0/0:22,0:21:48:0,48,794	0/0:17,0:15:27.09:0,27,398	0/0:13,0:13:32.89:0,33,496	0/0:23,0:22:60.20:0,60,985	0/0:37,0:35:84.07:0,84,1337	0/0:17,0:17:39.12:0,39,628	1/1:19,0:19:5.47:58,5,0	0/1:2,17:18:0:0,0,0	0/0:19,0:19:44.90:0,45,736	1/1:10,0:10:27.08:369,27,0	0/0:10,0:10:26.83:0,27,423	1/1:1,8:9:9.02:103,9,0
chr10	71033680	.	TACACACACACACAC	T	1061.24	PASS	AB=0.814;AC=10;AF=0.192;AN=52;BaseQRankSum=6.858;DP=586;FS=0.000;HRun=0;HaplotypeScore=201.4479;InbreedingCoeff=0.3622;MQ=59.64;MQ0=11;MQRankSum=-4.172;QD=7.17;ReadPosRankSum=0.159;VQSLOD=2.5401;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:38:24.07:0,24,531	0/0:11,0:11:20.52:0,21,1297	./.	./.	0/0:22,0:21:28.25:0,28,1042	0/0:17,0:22:15.04:0,15,751	0/0:20,0:20:12.48:0,12,410	0/0:13,0:13:8.06:0,8,226	0/0:26,0:25:42.62:0,43,2572	0/0:30,0:29:52.82:0,53,2069	0/0:12,0:11:9.03:0,9,279	0/0:14,0:14:24.07:0,24,1375	1/1:7,0:13:6.02:115,6,0	0/0:24,0:24:42.14:0,42,2099	0/0:15,0:23:27.06:0,27,1267	0/0:22,0:22:24.54:0,25,1156	0/0:25,0:25:48.16:0,48,2721	0/0:13,0:16:21.07:0,21,730	0/0:10,0:9:4.56:0,5,40	0/1:15,0:16:57.53:58,0,131	0/0:25,0:25:15.02:0,15,308	0/0:18,0:18:33.11:0,33,1952	1/1:10,1:17:7.27:119,7,0	0/1:20,0:23:18:51,0,18	0/0:21,0:21:30.09:0,30,1465	0/1:26,14:40:99:590,0,127	0/1:16,0:25:37.49:37,0,69	1/1:7,6:13:6.02:233,6,0
chr10	71035653	.	TAC	T	2947.93	PASS	AB=0.669;AC=42;AF=0.808;AN=52;BaseQRankSum=-1.615;DP=703;FS=11.057;HRun=0;HaplotypeScore=99.6350;InbreedingCoeff=0.2900;MQ=55.33;MQ0=26;MQRankSum=2.700;QD=5.07;ReadPosRankSum=-1.406;VQSLOD=1.8284;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:36:0:0,0,0	1/1:7,0:6:8.69:79,9,0	./.	0/0:12,0:4:0:0,0,0	1/1:10,0:16:5.96:43,6,0	1/1:11,17:28:11.86:111,12,0	1/1:21,0:21:15.02:153,15,0	./.	1/1:9,12:19:15.04:163,15,0	1/1:16,0:30:12.37:137,12,0	1/1:10,0:20:8.15:42,8,0	1/1:12,14:28:20.89:209,21,0	1/1:10,0:28:3.02:14,3,0	1/1:14,13:27:17.67:176,18,0	0/0:23,0:41:21.01:0,21,217	1/1:13,14:27:17.88:177,18,0	1/1:18,7:22:11.98:130,12,0	1/1:9,0:23:19.03:96,19,0	1/1:17,4:18:7.84:95,8,0	0/1:11,17:27:29.03:115,0,29	1/1:34,0:31:45.03:461,45,0	0/1:11,10:21:35.44:56,0,35	0/0:11,0:25:2.22:0,2,7	1/1:12,0:31:2.67:14,3,0	1/1:9,20:29:21.06:228,21,0	1/1:19,12:29:36.07:374,36,0	0/1:12,13:24:23.44:174,0,23	1/1:1,10:10:2.16:31,2,0
chr10	71036105	.	G	GA	3830.31	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=10.386;DP=604;FS=1.172;HRun=2;HaplotypeScore=81.0720;InbreedingCoeff=0.9104;MQ=60.64;MQ0=10;MQRankSum=-1.154;QD=21.52;ReadPosRankSum=2.162;VQSLOD=3.7518;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,34:40:96.32:1269,96,0	0/0:4,0:4:12.04:0,12,149	0/1:13,0:10:18.62:19,0,219	0/0:13,0:12:25.32:0,25,332	0/0:26,0:26:69.21:0,69,840	0/0:25,0:25:72.12:0,72,892	0/0:20,0:19:47.36:0,47,578	0/0:19,0:19:49.97:0,50,595	0/0:25,0:24:66.19:0,66,801	1/1:9,0:9:23.53:151,24,0	1/1:11,0:10:23.80:171,24,0	0/0:28,0:28:78.24:0,78,966	1/1:22,0:22:26.04:297,26,0	0/0:28,0:28:78.22:0,78,936	0/0:27,0:27:77.97:0,78,910	0/0:25,0:25:69.22:0,69,855	0/0:36,0:36:68.12:0,68,1182	0/0:13,0:13:33.04:0,33,378	0/0:21,0:18:51.14:0,51,609	0/0:27,0:27:75.23:0,75,918	0/0:22,0:21:60.66:0,61,744	0/0:29,0:29:87.24:0,87,1042	1/1:17,0:17:38.52:257,39,0	1/1:29,0:27:65.44:418,65,0	0/0:21,0:21:57.07:0,57,639	1/1:7,19:25:69.16:911,69,0	0/0:17,0:17:48.15:0,48,595	1/1:3,7:9:26.95:338,27,0
chr10	71036107	.	A	AG	4427.08	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=11.033;DP=610;FS=0.354;HRun=1;HaplotypeScore=83.2798;InbreedingCoeff=0.9019;MQ=60.46;MQ0=11;MQRankSum=-1.313;QD=24.46;ReadPosRankSum=0.294;VQSLOD=4.6761;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,4:40:97.96:801,98,0	0/0:4,0:4:12.04:0,12,156	0/1:13,0:10:5.52:6,0,239	0/0:13,0:12:24.23:0,24,342	0/0:26,0:26:72.17:0,72,890	0/0:25,0:25:72.23:0,72,934	0/0:21,0:20:29.21:0,29,564	0/0:19,0:19:55.71:0,56,620	0/0:27,0:26:70.50:0,71,860	1/1:3,8:11:30.57:441,31,0	1/1:1,9:9:24.08:354,24,0	0/0:27,0:27:81.25:0,81,1029	1/1:4,17:21:57.13:782,57,0	0/0:27,0:27:78.17:0,78,977	0/0:27,0:27:58.75:0,59,882	0/0:24,0:24:72.22:0,72,910	0/0:33,3:36:11:0,11,1170	0/0:11,0:12:5.27:0,5,340	0/0:22,0:18:48.15:0,48,607	0/0:26,0:26:78.22:0,78,976	0/0:23,1:23:65.31:0,65,822	0/0:29,0:29:84.26:0,84,1075	1/1:0,16:16:39.13:574,39,0	1/1:4,27:29:59.69:882,60,0	0/0:22,0:22:24.21:0,24,548	1/1:23,2:27:73.06:462,73,0	0/0:18,0:18:51.16:0,51,647	1/1:8,0:9:19.83:126,20,0
chr10	71036109	.	AAGGAAGGAAGGAAG	A	745.31	PASS	AB=0.987;AC=9;AF=0.161;AN=56;BaseQRankSum=11.250;DP=607;FS=0.722;HRun=0;HaplotypeScore=248.4101;InbreedingCoeff=0.0826;MQ=59.20;MQ0=16;MQRankSum=-1.571;QD=5.44;ReadPosRankSum=1.520;VQSLOD=1.9174;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:50.02:0,50,1544	0/0:4,0:4:12.04:0,12,346	0/0:13,0:10:16.39:0,16,282	0/0:12,0:11:27.09:0,27,376	0/0:25,0:25:69.23:0,69,1977	0/0:26,0:26:75.26:0,75,2821	0/0:22,0:21:60.67:0,61,1034	0/0:21,0:19:56.89:0,57,799	0/0:26,0:25:75.24:0,75,1995	0/1:12,0:12:34.44:34,0,217	0/1:9,0:8:2.13:2,0,102	0/0:27,0:27:81.28:0,81,3028	0/1:19,0:19:69.10:69,0,1036	0/0:26,0:26:78.24:0,78,2525	0/0:25,0:25:72.24:0,72,2385	0/0:24,0:24:72.24:0,72,2748	0/0:36,0:36:91.43:0,91,2950	0/1:13,0:13:7.54:8,0,446	0/0:23,0:16:48.16:0,48,1253	0/0:29,0:29:87.28:0,87,2021	0/0:25,0:24:70.12:0,70,2725	0/0:27,0:27:81.27:0,81,2183	0/1:15,0:15:18.33:18,0,281	0/1:30,0:28:43.02:43,0,936	0/0:21,0:21:60.16:0,60,1498	0/1:26,3:28:99:462,0,102	0/0:18,0:18:54.18:0,54,1613	1/1:8,2:9:11.85:246,12,0
chr10	71036118	.	AG	A	45.86	PASS	AB=0.765;AC=1;AF=0.018;AN=56;BaseQRankSum=4.448;DP=583;FS=0.000;HRun=2;HaplotypeScore=91.6617;InbreedingCoeff=-0.0259;MQ=55.57;MQ0=18;MQRankSum=-3.385;QD=3.53;ReadPosRankSum=-0.256;VQSLOD=-0.0193;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:92.04:0,92,1240	0/0:6,0:6:15.05:0,15,215	0/0:8,0:5:3.48:0,3,44	0/0:4,0:4:12.03:0,12,143	0/0:23,0:23:63.20:0,63,905	0/0:25,0:25:72.13:0,72,1045	0/0:22,0:21:57.03:0,57,776	0/0:24,0:19:50.49:0,50,767	0/0:26,0:25:70.78:0,71,994	0/0:11,0:11:33.11:0,33,465	0/0:9,0:8:21.89:0,22,278	0/0:26,0:26:78.24:0,78,1112	0/0:17,0:17:48.15:0,48,702	0/0:28,0:28:84.28:0,84,1226	0/0:25,0:25:66.22:0,66,967	0/0:24,0:24:72.23:0,72,1036	0/0:35,0:35:94.94:0,95,1368	0/1:9,4:13:99:120,0,263	0/0:23,0:16:46.04:0,46,653	0/0:24,0:24:72.24:0,72,1043	0/0:27,0:26:75.02:0,75,1027	0/0:25,0:25:72.24:0,72,1045	0/0:13,0:13:39.13:0,39,552	0/0:29,0:27:66.32:0,66,922	0/0:20,0:20:57.17:0,57,782	0/0:32,0:31:77.64:0,78,1151	0/0:14,0:14:42.11:0,42,583	0/0:11,0:10:19.10:0,19,319
chr10	71036149	.	A	AAGGG	3061.80	PASS	AB=0.975;AC=16;AF=0.296;AN=54;BaseQRankSum=8.771;DP=592;FS=0.747;HRun=0;HaplotypeScore=113.8421;InbreedingCoeff=0.6588;MQ=54.78;MQ0=17;MQRankSum=0.971;QD=15.08;ReadPosRankSum=0.912;VQSLOD=3.3622;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,5:37:64.56:1018,65,0	0/0:14,0:14:41.88:0,42,377	0/1:5,0:3:3.22:3,0,20	./.	0/0:24,0:24:59.91:0,60,704	0/0:26,0:26:68.99:0,69,905	0/0:22,0:21:18.86:0,19,383	0/0:24,0:17:29.83:0,30,237	0/0:20,0:19:56.97:0,57,656	0/1:14,0:13:14.07:164,0,14	0/1:8,0:8:19.27:29,0,19	0/0:27,0:27:77.99:0,78,1005	1/1:20,0:20:56.32:429,56,0	0/0:23,0:23:63.05:0,63,804	0/0:22,0:22:58.88:0,59,774	0/0:28,0:27:78.09:0,78,1001	0/0:27,0:27:33.64:0,34,733	0/0:15,0:15:32.24:0,32,261	0/0:15,0:14:41.94:0,42,471	0/0:27,0:26:75:0,75,809	0/0:34,0:34:85.32:0,85,1076	0/0:25,0:25:69.05:0,69,775	1/1:17,0:17:25.30:337,25,0	1/1:39,0:37:50.99:673,51,0	0/1:20,0:20:54.61:55,0,363	1/1:33,0:32:9.16:423,9,0	0/0:14,0:14:42.08:0,42,534	1/1:7,0:7:14.21:120,14,0
chr10	71036962	.	CACGT	C	1166.95	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=8.176;DP=613;FS=2.176;HRun=0;HaplotypeScore=117.7808;InbreedingCoeff=0.6715;MQ=61.16;MQ0=5;MQRankSum=-1.921;QD=10.51;ReadPosRankSum=-0.020;VQSLOD=2.7020;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:29.61:30,0,38	0/0:7,0:7:18.06:0,18,388	0/0:30,0:17:40.38:0,40,856	0/0:26,0:16:44.02:0,44,747	0/0:22,0:22:66.12:0,66,1362	0/0:24,0:24:63.17:0,63,1559	0/0:24,0:24:65.95:0,66,1519	0/0:46,0:46:99:0,132,2729	0/0:16,0:16:41.92:0,42,915	0/0:32,0:32:68.96:0,69,1166	0/1:19,0:19:24.62:25,0,637	0/0:15,0:15:45.15:0,45,1091	1/1:3,14:17:21.07:350,21,0	0/0:16,0:16:45.12:0,45,1117	0/0:22,0:22:60.21:0,60,1461	0/0:21,0:21:63.22:0,63,1716	0/0:13,0:13:36.12:0,36,835	0/0:26,0:26:14.79:0,15,822	0/0:19,0:17:48.05:0,48,977	0/0:22,0:22:66.23:0,66,1682	0/0:17,0:17:45.15:0,45,1123	0/0:17,0:17:48.16:0,48,1080	1/1:20,8:28:36.31:470,36,0	1/1:4,19:23:27.53:446,28,0	0/0:25,0:25:75.22:0,75,1719	0/0:24,0:24:12.83:0,13,422	0/0:29,0:29:81.25:0,81,1752	0/0:9,0:8:5.48:0,5,79
chr10	71036970	.	T	TACACACACACAC	2053.06	PASS	AB=0.659;AC=5;AF=0.089;AN=56;BaseQRankSum=-2.159;DP=648;FS=10.456;HRun=0;HaplotypeScore=224.3503;InbreedingCoeff=0.8016;MQ=59.85;MQ0=6;MQRankSum=-3.521;QD=28.92;ReadPosRankSum=-1.826;VQSLOD=1.7162;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,11:29:1.28:4,0,1	0/0:6,0:6:9.03:0,9,315	0/0:28,0:14:17.96:0,18,297	0/0:26,0:13:9.03:0,9,167	0/0:18,0:19:42.12:0,42,1365	0/0:24,0:24:57.14:0,57,1838	0/0:22,0:23:51.16:0,51,1588	0/0:41,0:45:54.64:0,55,1649	0/0:17,0:17:30.09:0,30,923	0/0:31,0:31:78.24:0,78,2326	0/0:18,0:18:38.87:0,39,1104	0/0:17,0:18:42.10:0,42,1207	0/0:18,0:18:27.06:0,27,629	0/0:18,0:18:48.12:0,48,1301	0/0:23,0:23:48.16:0,48,1611	0/0:22,0:22:66.23:0,66,2167	0/0:16,0:16:32.29:0,32,910	0/0:23,0:24:54.14:0,54,1577	0/0:27,0:25:29.94:0,30,1035	0/0:24,0:24:63.20:0,63,1958	0/0:22,0:23:15.99:0,16,1485	0/0:18,0:18:30.07:0,30,820	0/0:23,0:23:24.80:0,25,617	0/0:26,0:26:39.08:0,39,927	0/0:28,0:29:63.18:0,63,1695	1/1:11,18:32:47.06:1811,47,0	0/0:29,0:30:65.99:0,66,1860	1/1:4,5:9:6.02:353,6,0
chr10	71037134	.	C	CG	1607.07	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.299;DP=647;FS=2.560;HRun=5;HaplotypeScore=63.7248;InbreedingCoeff=0.9954;MQ=70.24;MQ0=0;MQRankSum=-0.832;QD=27.71;ReadPosRankSum=0.370;VQSLOD=3.7050;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,114,1178	0/0:8,0:8:24.06:0,24,258	0/0:17,0:16:33.43:0,33,316	0/0:12,0:12:27.01:0,27,271	0/0:35,0:35:99:0,102,1065	0/0:16,0:16:48.01:0,48,474	0/0:20,0:20:54.12:0,54,572	0/0:23,0:23:68.78:0,69,688	0/0:16,0:16:45.07:0,45,470	1/1:3,31:34:83.69:1008,84,0	1/1:4,20:24:59.97:721,60,0	0/0:19,0:19:54.11:0,54,565	0/0:15,0:15:30.05:0,30,314	0/0:22,0:22:66.12:0,66,692	0/0:34,0:34:90.19:0,90,944	0/0:31,0:31:84.20:0,84,894	0/0:32,0:32:81.12:0,81,838	0/0:22,0:22:60.15:0,60,644	0/0:30,0:30:75.18:0,75,803	0/0:19,0:19:57.12:0,57,598	0/0:11,0:11:27.04:0,27,275	0/0:16,0:16:45.07:0,45,462	0/0:18,0:18:53.80:0,54,552	0/0:31,0:31:81.19:0,81,863	0/0:19,0:19:51.10:0,51,531	0/0:28,1:28:41.62:0,42,759	0/0:38,0:38:99:0,111,1161	0/0:8,0:8:21.05:0,21,226
chr10	71037978	.	C	CA	3416.32	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.418;DP=831;FS=5.528;HRun=1;HaplotypeScore=82.5472;InbreedingCoeff=0.9999;MQ=84.01;MQ0=0;MQRankSum=-2.705;QD=40.67;ReadPosRankSum=1.650;VQSLOD=4.2150;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1541	0/0:22,0:22:66.21:0,66,856	0/0:32,0:32:87.74:0,88,1107	0/0:24,0:24:66:0,66,812	0/0:39,0:39:99:0,114,1450	0/0:21,0:21:63.20:0,63,818	0/0:25,0:25:75.24:0,75,974	0/0:40,0:40:99:0,117,1505	0/0:29,0:29:84.26:0,84,1075	0/0:32,0:32:96.31:0,96,1236	0/0:23,0:23:66.20:0,66,842	0/0:29,0:29:84.27:0,84,1090	1/1:3,24:27:66.22:988,66,0	0/0:37,0:37:99:0,108,1400	0/0:38,0:38:99:0,111,1424	0/0:23,0:23:69.22:0,69,895	0/0:26,0:26:78.23:0,78,996	0/0:29,0:29:81.26:0,81,1042	0/0:19,0:19:51.17:0,51,662	0/0:23,0:23:69.22:0,69,896	0/0:61,0:61:99:0,178,2278	0/0:27,0:27:81.26:0,81,1050	1/1:0,28:28:81.27:1214,81,0	1/1:0,29:29:81.27:1214,81,0	0/0:32,0:32:96.30:0,96,1229	0/0:36,0:35:99:0,99,1286	0/0:28,0:28:81.26:0,81,1051	0/0:11,0:11:33.11:0,33,428
chr10	71039217	.	T	TGC	1988	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=3.826;DP=642;FS=3.446;HRun=0;HaplotypeScore=101.6723;InbreedingCoeff=0.5510;MQ=59.10;MQ0=5;MQRankSum=-6.706;QD=12.20;ReadPosRankSum=1.408;VQSLOD=3.2935;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:44:99:105,0,157	0/0:10,0:10:23.97:0,24,283	0/0:6,0:5:2.14:0,2,36	0/0:11,0:5:7.34:0,7,26	0/0:25,0:25:57.09:0,57,651	0/0:21,0:21:36.09:0,36,430	0/0:34,0:34:87.14:0,87,970	0/0:26,0:26:51.09:0,51,530	0/0:24,0:24:60.06:0,60,650	0/1:22,0:22:6.07:6,0,119	0/1:15,0:15:10.25:22,0,10	0/0:21,0:22:53.96:0,54,620	1/1:9,14:22:14.01:380,14,0	0/0:23,0:23:56.49:0,56,640	0/0:20,0:20:41.97:0,42,457	0/0:27,0:27:63.07:0,63,699	0/0:52,0:52:99:0,129,1521	0/0:26,0:26:28.42:0,28,260	0/0:18,0:18:39.09:0,39,452	0/0:16,0:16:39.07:0,39,438	0/0:48,0:48:99:0,114,1276	0/0:15,0:15:39.11:0,39,482	1/1:2,17:19:27.09:445,27,0	1/1:10,30:38:72.24:1183,72,0	0/0:15,0:15:36:0,36,360	0/0:19,0:19:15.69:0,16,249	0/0:16,0:16:42.08:0,42,480	0/0:3,0:3:4.04:0,4,60
chr10	71039228	.	G	GTGTGTGTC	5708.14	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-4.835;DP=666;FS=0.540;HRun=0;HaplotypeScore=170.1301;InbreedingCoeff=0.8591;MQ=59.74;MQ0=5;MQRankSum=-10.409;QD=37.31;ReadPosRankSum=0.853;VQSLOD=4.4361;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,25:50:38.84:1423,39,0	0/0:10,0:10:27.09:0,27,712	0/0:11,0:8:20.73:0,21,397	0/1:18,0:10:23.26:23,0,122	0/0:24,0:24:54.19:0,54,1331	0/0:17,0:17:36.12:0,36,846	0/0:35,0:35:81.25:0,81,1984	0/0:31,0:31:72.24:0,72,1692	0/0:25,0:25:72.21:0,72,1744	1/1:8,12:21:37.01:1446,37,0	1/1:3,12:16:15.05:631,15,0	0/0:25,0:25:72.23:0,72,1671	0/0:18,0:17:33.11:0,33,544	0/0:27,0:27:66.19:0,66,1565	0/0:21,0:21:54.18:0,54,1285	0/0:28,0:28:63.22:0,63,1519	0/0:50,0:50:99:0,135,3305	1/1:13,12:26:30.57:1159,31,0	0/0:16,0:16:24.08:0,24,633	0/0:16,0:16:39.13:0,39,921	0/0:47,0:47:99:0,102,2448	0/0:16,0:16:39.11:0,39,829	0/0:22,0:22:33.08:0,33,473	0/0:42,0:40:99:0,99,1562	0/0:15,0:15:27.09:0,27,703	1/1:10,7:18:27.08:898,27,0	0/0:17,0:17:39.12:0,39,944	1/1:2,1:3:3.01:127,3,0
chr10	71039497	.	ATCCAACAATAGTGGGT	A	8789.21	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.286;DP=669;FS=5.167;HRun=0;HaplotypeScore=282.8425;InbreedingCoeff=0.9961;MQ=89.98;MQ0=0;MQRankSum=-12.941;QD=108.51;ReadPosRankSum=1.459;VQSLOD=4.1539;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:72.25:2937,72,0	0/0:11,0:11:33.11:0,33,2587	0/0:25,0:25:75.23:0,75,4251	0/0:30,0:30:87.30:0,87,5461	0/0:28,0:28:84.29:0,84,6242	0/0:24,0:24:72.25:0,72,5632	0/0:28,0:28:84.26:0,84,5828	0/0:23,0:23:69.24:0,69,4871	0/0:24,0:24:72.25:0,72,5306	0/0:35,0:35:99:0,105,8057	0/0:26,0:26:78.27:0,78,5583	0/0:29,0:29:87.30:0,87,6165	1/1:1,17:18:48.16:2307,48,0	0/0:34,0:34:99:0,102,7520	0/0:28,0:28:84.29:0,84,6211	0/0:27,0:27:81.26:0,81,5883	0/0:20,0:20:60.19:0,60,4193	1/1:0,7:7:18.06:880,18,0	0/0:30,0:30:90.31:0,90,6572	0/0:26,0:26:78.24:0,78,5672	0/0:37,0:37:99:0,111,8202	0/0:17,0:17:48.16:0,48,3301	1/1:0,18:18:45.15:1949,45,0	1/1:0,10:10:18.06:717,18,0	0/0:14,0:14:42.12:0,42,2918	0/0:32,0:32:96.32:0,96,6996	0/0:28,0:28:84.27:0,84,6095	0/0:12,0:12:36.11:0,36,2299
chr10	71040015	.	TTCTGACAC	T	3000.44	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.160;DP=766;FS=4.733;HRun=0;HaplotypeScore=196.0950;InbreedingCoeff=0.9989;MQ=82.96;MQ0=0;MQRankSum=-10.060;QD=50.01;ReadPosRankSum=1.336;VQSLOD=3.1195;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,144,5802	0/0:17,0:17:51.13:0,51,1940	0/0:30,0:30:75.25:0,75,2713	0/0:29,0:30:65.60:0,66,2321	0/0:27,0:27:75.21:0,75,2794	0/0:29,0:29:78.25:0,78,3260	0/0:22,0:22:63.22:0,63,2609	0/0:32,0:32:81.25:0,81,3049	0/0:32,0:32:90.30:0,90,3672	0/0:28,0:28:72.25:0,72,2751	0/0:20,0:20:60.21:0,60,2448	0/0:31,0:31:90.30:0,90,3696	1/1:1,17:18:48.16:1290,48,0	0/0:27,0:27:78.25:0,78,3105	0/0:35,0:35:99:0,102,4268	0/0:29,0:29:84.29:0,84,3509	0/0:31,0:31:90.27:0,90,3669	0/0:26,0:26:75.26:0,75,3164	0/0:26,0:26:69.22:0,69,2451	0/0:29,0:29:84.29:0,84,3409	0/0:33,0:33:96.30:0,96,3842	0/0:24,0:24:69.24:0,69,2836	1/1:1,27:28:50.52:1250,51,0	1/1:1,13:14:24.08:603,24,0	0/0:20,0:20:57.17:0,57,2229	0/0:34,0:33:93.31:0,93,3691	0/0:32,0:31:93.32:0,93,3861	0/0:11,0:11:27.05:0,27,950
chr10	71040158	.	T	TGGC	9069.97	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=19.054;DP=775;FS=7.986;HRun=0;HaplotypeScore=149.6182;InbreedingCoeff=0.9908;MQ=83.48;MQ0=0;MQRankSum=-18.747;QD=47.99;ReadPosRankSum=0.209;VQSLOD=6.7323;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:34:87.30:1585,87,0	0/0:17,0:17:51.15:0,51,917	0/0:23,0:23:60.15:0,60,1021	0/0:28,0:28:80.86:0,81,1388	0/0:29,0:29:84.27:0,84,1535	0/0:21,0:21:63.22:0,63,1169	0/0:36,0:36:99:0,108,1947	0/0:26,0:26:78.27:0,78,1445	0/0:16,0:16:48.16:0,48,892	1/1:2,20:22:63.22:1185,63,0	1/1:0,16:17:45.15:784,45,0	0/0:39,0:39:99:0,117,2150	1/1:0,17:22:60.20:1077,60,0	0/0:36,0:36:99:0,108,2012	0/0:49,0:49:99:0,144,2678	0/0:36,0:36:99:0,108,1977	0/0:38,0:38:99:0,114,2096	1/1:3,12:15:42.14:755,42,0	0/0:25,0:24:75.26:0,75,1389	0/0:33,0:33:99:0,99,1837	0/0:60,0:59:99:0,175,3232	0/0:28,0:28:84.28:0,84,1537	1/1:2,22:24:69.22:1197,69,0	1/1:2,15:20:36.55:641,37,0	0/0:29,0:29:84.27:0,84,1506	1/1:5,26:32:90.13:1679,90,0	0/0:17,0:17:51.17:0,51,951	1/1:0,3:3:9.03:167,9,0
chr10	71040159	.	T	TAAG	10952.03	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=20.372;DP=816;FS=18.489;HRun=0;HaplotypeScore=166.6929;InbreedingCoeff=0.9987;MQ=82.09;MQ0=0;MQRankSum=-19.462;QD=48.89;ReadPosRankSum=-1.440;VQSLOD=4.6681;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,29:39:99:1875,104,0	0/0:18,0:18:51.17:0,51,942	0/0:24,0:24:60.12:0,60,1005	0/0:28,0:28:81.01:0,81,1413	0/0:29,0:29:84.27:0,84,1533	0/0:21,0:21:63.20:0,63,1142	0/0:37,0:37:99:0,108,1969	0/0:28,0:28:78.23:0,78,1389	0/0:16,0:16:48.16:0,48,891	1/1:8,20:28:78.26:1412,78,0	1/1:3,16:19:48.16:873,48,0	0/0:40,0:40:99:0,117,2174	1/1:8,18:26:75.24:1325,75,0	0/0:36,0:36:99:0,108,2005	0/0:49,0:49:99:0,147,2710	0/0:35,0:35:99:0,105,1887	0/0:38,0:38:99:0,114,2118	1/1:6,12:18:42.12:790,42,0	0/0:26,0:25:75.24:0,75,1355	0/0:33,0:33:99:0,99,1785	0/0:60,0:59:99:0,178,3235	0/0:29,0:29:84.29:0,84,1557	1/1:6,22:28:84.15:1447,84,0	1/1:5,15:20:45.02:744,45,0	0/0:28,0:28:78.23:0,78,1359	1/1:14,26:40:99:2142,117,0	0/0:17,0:17:51.17:0,51,941	1/1:3,3:6:18.06:345,18,0
chr10	71040439	.	A	AGCGT	3087.82	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.229;DP=871;FS=1.242;HRun=0;HaplotypeScore=142.8570;InbreedingCoeff=0.9708;MQ=82.73;MQ0=0;MQRankSum=-4.652;QD=48.25;ReadPosRankSum=1.335;VQSLOD=4.4596;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,36:43:81.28:2135,81,0	0/0:19,0:19:54.19:0,54,994	0/0:37,0:37:83.33:0,83,1349	0/0:25,0:25:44.88:0,45,892	0/0:23,0:23:66.21:0,66,1162	0/0:17,0:17:51.16:0,51,907	0/0:35,0:35:96.33:0,96,1746	0/0:28,0:27:75.25:0,75,1346	0/0:36,0:36:99:0,105,1879	0/0:44,0:44:99:0,120,2138	0/0:19,0:19:48.16:0,48,866	0/0:45,0:45:99:0,129,2349	0/0:36,0:36:99:0,102,1796	0/0:31,0:31:84.29:0,84,1534	0/0:48,0:48:99:0,135,2430	0/0:40,0:40:99:0,111,2023	0/0:36,0:36:99:0,99,1771	1/1:5,16:21:42.14:1075,42,0	0/0:19,0:19:57.19:0,57,1000	0/0:18,0:18:48.16:0,48,877	0/0:49,0:49:99:0,138,2471	0/0:26,0:26:78.27:0,78,1405	0/0:25,0:25:60.19:0,60,1061	0/0:40,0:40:99:0,114,2065	0/0:22,0:22:66.20:0,66,1174	0/0:41,0:41:99:0,108,1882	0/0:45,0:45:99:0,114,2072	0/0:3,0:3:9.03:0,9,166
chr10	71041513	.	GTT	G	5926.79	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.835;DP=807;FS=1.572;HRun=2;HaplotypeScore=105.2030;InbreedingCoeff=0.9994;MQ=79.27;MQ0=1;MQRankSum=-1.251;QD=43.58;ReadPosRankSum=3.169;VQSLOD=4.9096;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,2528	0/0:12,0:12:36.12:0,36,719	0/0:25,0:25:72.22:0,72,1413	0/0:18,0:16:45.15:0,45,880	0/0:36,0:36:99:0,108,2128	0/0:22,0:22:66.23:0,66,1328	0/0:28,0:28:84.27:0,84,1657	0/0:39,0:39:99:0,117,2314	0/0:25,0:25:75.26:0,75,1514	1/1:0,29:29:87.28:1393,87,0	1/1:0,25:25:69.24:1124,69,0	0/0:30,0:30:90.31:0,90,1819	1/1:1,31:31:23.32:1261,23,0	0/0:39,0:39:99:0,117,2366	0/0:52,0:52:99:0,157,3124	0/0:26,0:26:78.27:0,78,1570	0/0:35,0:35:99:0,105,2111	0/0:26,0:26:78.27:0,78,1576	0/0:19,0:19:57.19:0,57,1124	0/0:36,0:36:99:0,105,2130	0/0:29,0:29:87.30:0,87,1749	0/0:30,0:30:90.30:0,90,1791	1/1:0,22:22:57.19:930,57,0	1/1:0,28:28:75.26:1218,75,0	0/0:19,0:19:57.18:0,57,1101	0/0:39,0:39:65.43:0,65,2192	0/0:30,0:30:90.31:0,90,1796	0/0:13,0:13:39.13:0,39,793
chr10	71041713	.	CAG	C	4038.66	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.091;DP=770;FS=1.279;HRun=0;HaplotypeScore=96.3221;InbreedingCoeff=0.9926;MQ=81.14;MQ0=0;MQRankSum=-1.626;QD=34.82;ReadPosRankSum=2.496;VQSLOD=5.4833;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,2332	0/0:11,0:11:27.09:0,27,486	0/0:16,0:16:42.14:0,42,753	0/0:31,0:30:73.93:0,74,1248	0/0:27,0:27:75.23:0,75,1284	0/0:22,0:22:60.21:0,60,1078	0/0:28,0:28:81.28:0,81,1458	0/0:33,0:33:96.32:0,96,1699	0/0:22,0:22:66.21:0,66,1153	1/1:3,28:31:81.23:1098,81,0	1/1:1,16:17:36.12:504,36,0	0/0:35,0:35:99:0,102,1786	1/1:2,24:26:66.21:924,66,0	0/0:38,0:38:99:0,108,1914	0/0:48,0:48:99:0,135,2390	0/0:31,0:31:90.31:0,90,1615	0/0:36,0:36:99:0,102,1805	0/0:17,0:17:51.17:0,51,917	0/0:26,0:26:72.25:0,72,1290	0/0:29,0:29:84.29:0,84,1512	0/0:38,0:38:99:0,105,1850	0/0:23,0:23:66.20:0,66,1117	1/1:1,19:20:51.17:714,51,0	1/1:1,21:22:57.19:798,57,0	0/0:22,0:22:66.23:0,66,1189	0/0:37,1:38:66.34:0,66,1847	0/0:32,0:32:90.31:0,90,1599	0/0:4,0:4:12.04:0,12,216
chr10	71044062	.	A	AAAT	7469.45	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.624;DP=545;FS=5.548;HRun=0;HaplotypeScore=98.9686;InbreedingCoeff=0.9868;MQ=58.71;MQ0=0;MQRankSum=-2.842;QD=41.27;ReadPosRankSum=2.243;VQSLOD=6.4204;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:19:51.16:971,51,0	0/0:5,0:5:12.04:0,12,196	0/0:14,0:11:27.07:0,27,425	0/0:7,0:6:10.80:0,11,116	0/0:24,0:24:69.24:0,69,1123	0/0:14,0:14:30.10:0,30,483	0/0:11,0:11:30.10:0,30,482	0/0:38,0:38:99:0,102,1609	0/0:11,0:11:27.09:0,27,436	1/1:8,14:21:42.12:797,42,0	1/1:10,8:14:24.08:396,24,0	0/0:25,0:24:69.24:0,69,1120	1/1:7,12:17:36.06:686,36,0	0/0:20,0:19:51.17:0,51,824	0/0:23,0:23:63.20:0,63,1005	0/0:26,0:26:69.24:0,69,1124	0/0:25,0:24:63.21:0,63,1021	1/1:8,21:27:66.01:1321,66,0	0/0:30,0:29:63.21:0,63,994	0/0:19,0:19:54.18:0,54,870	0/0:10,0:10:21.04:0,21,314	0/0:17,0:17:39.12:0,39,598	1/1:6,12:16:33.11:680,33,0	1/1:3,15:18:45.15:933,45,0	0/0:16,0:16:42.12:0,42,651	1/1:6,22:25:69.20:1310,69,0	0/0:29,0:27:84.26:0,84,1286	1/1:1,6:7:21.07:376,21,0
chr10	71044070	.	TTA	T	5101.38	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.004;DP=532;FS=16.132;HRun=0;HaplotypeScore=94.0537;InbreedingCoeff=0.9772;MQ=62.45;MQ0=0;MQRankSum=-4.170;QD=32.08;ReadPosRankSum=4.409;VQSLOD=5.8997;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,15:18:43.64:643,44,0	0/0:5,0:5:15.02:0,15,203	0/0:12,0:10:26.85:0,27,349	0/0:8,0:7:14.92:0,15,214	0/0:23,0:23:69.17:0,69,1209	0/0:13,0:13:39.09:0,39,671	0/0:13,0:13:39.13:0,39,749	0/0:37,0:37:99:0,111,1821	0/0:13,0:13:36.09:0,36,609	1/1:3,12:14:42.11:591,42,0	1/1:1,10:10:30.09:402,30,0	0/0:29,0:28:81.03:0,81,1368	1/1:4,14:16:33.37:490,33,0	0/0:20,0:19:54.13:0,54,905	0/0:22,0:22:66.13:0,66,1193	0/0:25,0:25:72.18:0,72,1248	0/0:30,0:29:87.08:0,87,1520	1/1:4,23:26:17.80:909,18,0	0/0:26,0:25:75.15:0,75,1391	0/0:19,0:19:57.17:0,57,1063	0/0:8,0:8:20.36:0,20,258	0/0:16,0:16:45.15:0,45,852	1/1:3,14:15:32.76:473,33,0	1/1:1,18:19:6.75:568,7,0	0/0:19,0:19:57.15:0,57,933	1/1:5,19:22:24.33:744,24,0	0/0:35,0:33:99:0,105,1769	1/1:0,7:7:21.07:280,21,0
chr10	71044071	.	TA	T	597.92	PASS	AB=0.937;AC=19;AF=0.339;AN=56;BaseQRankSum=12.924;DP=531;FS=27.133;HRun=10;HaplotypeScore=99.5470;InbreedingCoeff=0.7156;MQ=62.38;MQ0=0;MQRankSum=-1.089;QD=3.32;ReadPosRankSum=4.367;VQSLOD=-0.1265;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:18:3.20:66,0,3	0/0:5,0:5:9.02:0,9,96	0/1:11,1:10:8.01:8,0,145	0/0:8,0:7:8.99:0,9,88	0/0:23,0:23:54.13:0,54,587	0/0:13,0:13:36.07:0,36,380	0/0:13,0:13:39.09:0,39,421	0/0:35,1:36:64.13:0,64,896	0/0:13,0:13:30.07:0,30,324	1/1:15,0:14:22.55:99,23,0	1/1:11,0:10:8.75:46,9,0	0/0:27,2:28:20.07:0,20,660	1/1:18,0:16:5.18:53,5,0	0/0:19,0:18:42.11:0,42,457	0/0:23,0:23:57.13:0,57,615	0/0:25,0:25:60.14:0,60,648	0/0:28,2:29:29.09:0,29,757	1/1:26,1:26:38.11:188,38,0	0/0:25,1:25:43.12:0,43,696	0/0:18,0:18:48.13:0,48,531	0/1:7,1:8:14.02:14,0,88	0/0:15,1:16:36.10:0,36,398	1/1:17,0:15:21.22:88,21,0	1/1:19,0:19:5.97:86,6,0	0/0:20,0:20:48.06:0,48,500	1/1:25,0:23:12.29:114,12,0	0/0:32,2:32:44.10:0,44,910	1/1:7,0:7:6.77:28,7,0
chr10	71044984	.	C	CT	1045.47	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.163;DP=676;FS=0.000;HRun=10;HaplotypeScore=70.9419;InbreedingCoeff=0.9120;MQ=71.68;MQ0=0;MQRankSum=-0.879;QD=21.78;ReadPosRankSum=0.150;VQSLOD=4.3436;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,936	0/0:13,0:13:35.96:0,36,296	0/0:17,0:17:24.25:0,24,247	0/0:11,0:12:2.72:0,3,75	0/0:35,1:36:51.67:0,52,630	0/0:24,1:25:33.91:0,34,485	0/0:21,0:22:58.96:0,59,474	0/0:36,0:37:70.65:0,71,562	0/0:22,0:23:55.94:0,56,448	0/0:25,0:25:65.91:0,66,540	0/0:22,0:23:61.96:0,62,498	0/0:22,0:22:53.92:0,54,443	0/0:18,0:18:50.93:0,51,418	0/0:17,0:18:49.96:0,50,396	0/0:21,0:21:38.89:0,39,317	0/0:29,0:32:75.97:0,76,603	0/0:30,0:31:79.88:0,80,640	0/0:22,0:22:59.88:0,60,487	0/0:17,0:18:37.96:0,38,301	0/0:29,0:29:65.90:0,66,542	0/0:20,0:21:58.96:0,59,473	0/0:26,0:26:68.88:0,69,563	0/0:21,0:21:53.93:0,54,443	0/0:30,0:32:81.74:0,82,650	0/0:26,0:25:53.73:0,54,443	1/1:3,27:30:70.69:722,71,0	0/0:17,0:17:38.92:0,39,317	1/1:4,14:18:40.46:445,40,0
chr10	71045204	.	AAAAAAG	A	1256.97	PASS	AB=0.804;AC=10;AF=0.179;AN=56;BaseQRankSum=8.515;DP=515;FS=7.648;HRun=0;HaplotypeScore=104.5499;InbreedingCoeff=0.7371;MQ=57.50;MQ0=9;MQRankSum=2.455;QD=9.74;ReadPosRankSum=2.288;VQSLOD=1.0647;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,1:39:99:198,0,109	0/0:13,0:13:35.11:0,35,657	0/0:9,0:7:4.49:0,4,198	0/0:6,0:6:14.93:0,15,175	0/0:24,0:22:56.06:0,56,1179	0/0:17,0:15:41.95:0,42,801	0/0:25,0:25:59.80:0,60,913	0/0:37,0:36:99:0,105,1808	0/0:13,0:13:35.02:0,35,655	1/1:3,16:19:24.63:451,25,0	0/1:8,11:19:0.07:234,0,0	0/0:12,0:11:32.97:0,33,599	1/1:13,2:15:9.07:276,9,0	0/0:11,0:11:32.91:0,33,518	0/0:14,0:14:35.97:0,36,734	0/0:17,0:17:50.87:0,51,823	0/0:39,0:36:98.10:0,98,1973	0/0:15,0:14:7.97:0,8,47	0/0:20,0:18:46.86:0,47,814	0/0:19,0:19:53.44:0,53,788	0/0:9,0:9:14.92:0,15,237	0/0:15,0:15:40.23:0,40,635	1/1:3,7:9:11.71:111,12,0	1/1:8,19:27:8.52:145,9,0	0/0:22,0:21:50.99:0,51,908	0/0:20,0:20:50.93:0,51,643	0/0:18,0:18:51.65:0,52,668	0/0:11,0:10:29.91:0,30,377
chr10	71045205	.	AAAAAG	A	1250.36	PASS	AB=0.817;AC=10;AF=0.179;AN=56;BaseQRankSum=8.452;DP=516;FS=3.514;HRun=0;HaplotypeScore=96.1191;InbreedingCoeff=0.7199;MQ=58.56;MQ0=9;MQRankSum=1.550;QD=9.85;ReadPosRankSum=1.505;VQSLOD=2.1529;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:16,22:38:39.50:367,0,40	0/0:13,0:13:34.30:0,34,540	0/0:9,0:7:4.45:0,4,173	0/0:7,0:7:17.92:0,18,170	0/0:24,0:22:53.15:0,53,960	0/0:17,0:15:38.56:0,39,634	0/0:25,0:25:50.93:0,51,726	0/0:37,0:36:97.43:0,97,1483	0/0:13,0:13:34.17:0,34,558	1/1:19,0:19:26.26:382,26,0	0/1:19,0:19:3:213,0,3	0/0:12,0:11:31.75:0,32,486	1/1:15,0:15:23.35:240,23,0	0/0:11,0:11:29.84:0,30,425	0/0:14,0:14:35.92:0,36,633	0/0:17,0:17:47.89:0,48,690	0/0:38,0:35:96.12:0,96,1646	0/0:7,8:14:1.36:0,1,3	0/0:21,0:19:47.77:0,48,698	0/0:19,0:19:53.30:0,53,618	0/0:9,0:9:13.60:0,14,189	0/0:15,0:15:37.30:0,37,492	1/1:10,0:9:11.74:93,12,0	1/1:26,0:26:8.74:115,9,0	0/0:23,0:22:53.87:0,54,759	0/0:20,0:20:47.90:0,48,534	0/0:19,0:19:51.12:0,51,564	0/0:11,0:10:23.76:0,24,262
chr10	71048103	.	CAGAGAGAGAG	C	439.05	PASS	AB=0.890;AC=6;AF=0.120;AN=50;BaseQRankSum=1.573;DP=646;FS=8.841;HRun=0;HaplotypeScore=197.4906;InbreedingCoeff=0.2805;MQ=46.38;MQ0=21;MQRankSum=0.196;QD=3.63;ReadPosRankSum=-2.636;VQSLOD=1.1831;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:20.92:0,21,874	0/0:7,0:6:9.03:0,9,324	./.	./.	0/0:34,0:32:51.17:0,51,1639	0/0:26,0:25:28.58:0,29,841	0/0:29,0:26:30.06:0,30,711	0/0:27,0:25:36.12:0,36,803	0/0:18,0:18:27.09:0,27,869	0/1:20,0:18:24.44:24,0,288	0/1:14,0:12:3.17:15,0,3	0/0:29,0:27:48.01:0,48,1406	0/1:15,14:29:28.94:237,0,29	0/0:24,0:24:42.14:0,42,1305	0/0:25,0:26:36.34:0,36,1240	0/0:38,0:39:75.65:0,76,2158	0/0:33,0:33:63.15:0,63,1637	0/0:15,0:14:21.02:0,21,668	0/0:21,0:20:24.08:0,24,592	0/0:15,0:14:24.08:0,24,615	0/0:49,0:46:75.23:0,75,1848	0/0:21,0:19:36.12:0,36,993	1/1:16,2:20:9.49:209,9,0	0/1:35,1:35:75.51:76,0,89	0/0:23,0:23:9.29:0,9,574	0/0:19,0:16:11.03:0,11,432	0/0:15,0:15:36.05:0,36,877	./.
chr10	71049089	.	CG	C	6455.42	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.119;DP=755;FS=7.632;HRun=5;HaplotypeScore=74.9329;InbreedingCoeff=0.9997;MQ=79.35;MQ0=0;MQRankSum=-1.846;QD=28.07;ReadPosRankSum=3.584;VQSLOD=5.1618;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:60.17:680,60,0	0/0:14,0:14:42.14:0,42,574	0/0:24,0:24:63.12:0,63,829	0/0:20,0:19:51.14:0,51,676	0/0:24,0:24:66.20:0,66,882	0/0:32,0:32:93.26:0,93,1215	0/0:15,0:15:39.13:0,39,533	0/0:46,0:46:99:0,114,1504	0/0:27,0:27:78.25:0,78,1048	1/1:2,25:27:72.19:808,72,0	1/1:2,23:25:66.10:720,66,0	0/0:27,0:27:75.23:0,75,994	1/1:4,32:36:78.22:885,78,0	0/0:38,0:38:99:0,108,1407	0/0:35,0:35:99:0,99,1289	0/0:32,0:32:90.30:0,90,1226	0/0:30,0:30:87.28:0,87,1173	1/1:0,24:24:66.19:748,66,0	0/0:15,0:15:42.13:0,42,558	0/0:33,0:33:90.27:0,90,1198	0/0:41,0:41:99:0,114,1540	0/0:24,0:24:69.19:0,69,882	1/1:3,20:23:60.17:680,60,0	1/1:2,25:27:63.18:714,63,0	0/0:18,0:18:54.17:0,54,722	1/1:0,31:31:84.23:948,84,0	0/0:30,0:30:87.28:0,87,1173	1/1:1,12:13:24.07:272,24,0
chr10	71049281	.	G	GAA	5646.34	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-11.029;DP=857;FS=13.804;HRun=0;HaplotypeScore=99.3489;InbreedingCoeff=0.9988;MQ=84.45;MQ0=1;MQRankSum=0.058;QD=49.53;ReadPosRankSum=-0.239;VQSLOD=4.4304;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,160,2545	0/0:16,0:16:48.15:0,48,756	0/0:22,0:22:60.16:0,60,883	0/0:30,0:30:68.74:0,69,980	0/0:29,0:29:87.27:0,87,1369	0/0:19,0:19:57.19:0,57,929	0/0:22,0:22:63.22:0,63,1023	0/0:36,0:36:99:0,108,1718	0/0:36,0:36:99:0,108,1712	1/1:3,37:42:99:2390,126,0	1/1:1,23:24:63.12:1198,63,0	0/0:38,0:38:99:0,114,1855	0/0:35,0:35:99:0,102,1635	0/0:35,0:35:99:0,105,1653	0/0:50,0:50:99:0,144,2318	0/0:48,0:48:99:0,141,2248	0/0:29,0:29:87.27:0,87,1368	0/0:18,0:18:54.18:0,54,881	0/0:23,0:23:69.22:0,69,1098	0/0:21,0:21:60.20:0,60,977	0/0:53,0:53:99:0,156,2435	0/0:23,0:23:66.19:0,66,1024	0/0:13,0:13:39.13:0,39,624	0/0:37,0:37:99:0,111,1785	0/0:23,0:23:69.24:0,69,1125	1/1:0,29:30:87.25:1632,87,0	0/0:32,0:32:93.27:0,93,1435	1/1:0,14:17:21.07:426,21,0
chr10	71050580	.	A	AT	4878.45	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-12.961;DP=658;FS=4.031;HRun=9;HaplotypeScore=65.7150;InbreedingCoeff=0.8615;MQ=73.17;MQ0=2;MQRankSum=2.159;QD=23.80;ReadPosRankSum=3.177;VQSLOD=5.8724;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:46.61:738,47,0	0/0:8,0:8:2.31:0,2,161	0/0:20,0:17:9.38:0,9,164	0/1:17,0:13:11.02:11,0,115	0/0:34,0:34:89.96:0,90,777	0/0:28,0:28:77.95:0,78,672	0/0:12,0:12:20.99:0,21,182	0/0:36,1:37:56.77:0,57,720	0/0:18,0:18:41.98:0,42,364	0/0:21,0:21:47.96:0,48,413	0/0:23,0:23:59.94:0,60,513	0/0:18,0:18:53.97:0,54,465	1/1:1,22:23:57.15:631,57,0	0/0:28,0:28:68.95:0,69,595	0/0:26,0:26:68.98:0,69,599	0/0:17,0:17:50.99:0,51,443	0/0:33,0:33:95.93:0,96,824	1/1:2,18:20:39.50:550,39,0	0/0:18,1:19:8.80:0,9,305	0/0:21,0:21:42.33:0,42,450	0/0:12,0:11:15.11:0,15,192	0/0:22,0:22:56.98:0,57,492	1/1:2,25:27:63.13:697,63,0	1/1:1,27:28:75.20:830,75,0	0/0:26,0:26:75.43:0,75,647	1/1:8,24:33:28.95:759,29,0	0/0:29,0:29:67.76:0,68,574	1/1:3,21:23:60.16:664,60,0
chr10	71051528	.	A	AC	7882.59	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-11.116;DP=731;FS=0.629;HRun=4;HaplotypeScore=80.4240;InbreedingCoeff=0.9999;MQ=86.77;MQ0=0;MQRankSum=-0.300;QD=35.51;ReadPosRankSum=3.210;VQSLOD=5.2096;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,32:38:96.26:1266,96,0	0/0:15,0:15:45.10:0,45,489	0/0:25,0:25:56.93:0,57,700	0/0:27,0:27:58:0,58,674	0/0:35,0:35:96.27:0,96,1087	0/0:23,0:23:63.18:0,63,715	0/0:34,0:34:90.24:0,90,1011	0/0:26,0:26:75.21:0,75,850	0/0:22,0:22:57.14:0,57,637	1/1:3,36:39:99:1387,105,0	1/1:0,16:16:45.15:615,45,0	0/0:38,0:38:99:0,105,1180	1/1:2,21:23:57.19:778,57,0	0/0:20,0:20:57.16:0,57,645	0/0:35,0:35:99:0,99,1120	0/0:26,0:26:72.17:0,72,796	0/0:36,0:36:99:0,105,1191	1/1:2,12:14:36.12:492,36,0	0/0:18,0:18:51.10:0,51,544	0/0:26,0:26:78.22:0,78,884	0/0:29,0:29:81.23:0,81,919	0/0:17,0:17:42.08:0,42,455	1/1:2,21:23:60.18:803,60,0	1/1:2,30:32:79.15:1105,79,0	0/0:31,0:31:90.26:0,90,1020	1/1:2,25:27:75.25:1026,75,0	0/0:26,0:26:78.19:0,78,863	1/1:0,10:10:30.10:410,30,0
chr10	71051564	.	G	GA	1544	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.383;DP=712;FS=9.004;HRun=6;HaplotypeScore=86.7791;InbreedingCoeff=0.9993;MQ=79.43;MQ0=0;MQRankSum=-6.889;QD=27.09;ReadPosRankSum=-0.338;VQSLOD=3.4608;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,34:40:96.27:1175,96,0	0/0:15,0:15:39.09:0,39,398	0/0:17,0:17:48.11:0,48,488	0/0:19,0:19:47.68:0,48,461	0/0:31,0:31:87.19:0,87,887	0/0:17,0:17:51.12:0,51,520	0/0:36,0:36:83.45:0,83,881	0/0:31,0:31:78.15:0,78,788	0/0:24,0:24:69.16:0,69,703	0/0:33,0:33:84.19:0,84,857	0/0:15,0:15:36.08:0,36,367	0/0:34,0:34:93.16:0,93,936	0/0:24,0:24:60.12:0,60,605	0/0:24,0:24:69.13:0,69,696	0/0:34,0:34:93.21:0,93,949	0/0:35,0:35:99:0,99,993	0/0:24,0:24:72.16:0,72,735	1/1:4,13:17:39.12:490,39,0	0/0:23,0:23:61.37:0,61,609	0/0:29,0:29:78.17:0,78,795	0/0:28,0:28:81.18:0,81,826	0/0:20,0:20:54.12:0,54,551	0/0:18,0:18:47.98:0,48,489	0/0:30,0:30:81.18:0,81,826	0/0:27,0:26:69.15:0,69,704	0/0:34,0:34:90.20:0,90,918	0/0:24,0:24:72.13:0,72,725	0/0:9,0:9:27.06:0,27,275
chr10	71052152	.	G	GGGT	2024.37	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-4.620;DP=315;FS=13.399;HRun=0;HaplotypeScore=59.8313;InbreedingCoeff=0.8945;MQ=81.99;MQ0=0;MQRankSum=-0.525;QD=33.74;ReadPosRankSum=2.660;VQSLOD=2.9713;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:23.81:0,24,278	0/0:1,0:1:2.80:0,3,13	0/0:14,0:12:23.84:0,24,256	0/0:19,0:18:38.81:0,39,520	0/0:10,0:10:11.07:0,11,71	0/0:9,0:9:20.94:0,21,270	0/0:33,0:33:73.05:0,73,906	0/0:13,0:13:27.08:0,27,407	0/0:11,0:11:23.45:0,23,291	1/1:1,6:7:18.04:340,18,0	1/1:3,6:10:20.97:343,21,0	0/0:14,0:14:15.14:0,15,311	1/1:2,4:8:8.47:186,8,0	0/0:9,0:9:19.60:0,20,167	0/0:7,0:7:6.99:0,7,42	0/0:5,0:5:12:0,12,107	0/0:19,0:19:17.22:0,17,497	0/0:11,0:11:23.42:0,23,296	0/0:8,0:8:19.77:0,20,252	0/0:9,0:9:16.41:0,16,250	0/0:16,0:16:41.84:0,42,534	0/0:4,0:4:11.35:0,11,129	1/1:2,9:12:15.03:273,15,0	1/1:2,4:6:9.03:188,9,0	0/0:10,0:10:19.04:0,19,231	1/1:0,10:10:30.06:507,30,0	0/0:18,0:18:48.08:0,48,676	1/1:0,6:7:18.06:377,18,0
chr10	71052222	.	T	TG	1634.66	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.977;DP=503;FS=6.110;HRun=1;HaplotypeScore=51.8139;InbreedingCoeff=0.9874;MQ=94.82;MQ0=0;MQRankSum=-5.058;QD=34.78;ReadPosRankSum=1.885;VQSLOD=3.3503;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:69.23:1014,69,0	0/0:7,0:7:21.05:0,21,257	0/0:26,0:26:72.19:0,72,888	0/0:22,0:21:57.16:0,57,712	0/0:22,0:22:60.14:0,60,745	0/0:26,0:26:78.25:0,78,1011	0/0:24,0:24:72.21:0,72,904	0/0:29,0:29:84.25:0,84,1057	0/0:8,0:8:24.08:0,24,311	0/0:15,0:15:45.15:0,45,584	0/0:11,0:11:30.01:0,30,366	0/0:11,0:11:33.11:0,33,428	0/0:11,0:11:27.07:0,27,335	0/0:22,0:22:66.17:0,66,822	0/0:16,0:16:42.14:0,42,545	0/0:11,0:11:33.11:0,33,428	0/0:27,0:27:75.19:0,75,927	1/1:1,17:18:51.16:742,51,0	0/0:17,0:17:48.15:0,48,609	0/0:26,0:26:78.25:0,78,1011	0/0:21,0:21:63.19:0,63,803	0/0:17,0:17:51.17:0,51,662	0/0:14,0:14:33.11:0,33,428	0/0:6,0:6:15.05:0,15,195	0/0:11,0:11:32.84:0,33,401	0/0:20,0:20:60.19:0,60,767	0/0:24,0:24:72.23:0,72,934	0/0:12,0:12:36.07:0,36,434
chr10	71052748	.	T	TA	8373.70	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=19.622;DP=782;FS=6.424;HRun=2;HaplotypeScore=98.1525;InbreedingCoeff=0.9834;MQ=83.62;MQ0=0;MQRankSum=-2.324;QD=35.48;ReadPosRankSum=3.592;VQSLOD=5.0518;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:52:99:897,100,0	0/0:13,0:13:39.13:0,39,545	0/0:29,0:29:81.23:0,81,1058	0/0:16,0:16:48.16:0,48,658	0/0:21,0:21:60.20:0,60,839	0/0:27,0:27:81.25:0,81,1114	0/0:27,0:27:81.27:0,81,1133	0/0:29,0:29:78.24:0,78,1044	0/0:30,0:30:90.30:0,90,1258	1/1:0,43:43:99:2004,129,0	1/1:1,13:14:30.10:480,30,0	0/0:43,0:43:99:0,120,1675	1/1:0,28:28:75.26:1194,75,0	0/0:36,0:36:99:0,108,1506	0/0:44,0:44:99:0,129,1769	0/0:31,0:31:90.26:0,90,1208	0/0:39,0:39:99:0,114,1590	1/1:0,0:22:65.02:422,65,0	0/0:23,0:23:66.21:0,66,907	0/0:17,0:17:48.16:0,48,671	0/0:44,0:44:99:0,129,1763	0/0:28,0:28:81.24:0,81,1097	1/1:0,16:16:48.16:767,48,0	1/1:0,34:34:96.33:1535,96,0	0/0:16,0:16:48.15:0,48,654	1/1:0,21:21:63.20:979,63,0	0/0:33,0:32:93.29:0,93,1275	1/1:2,4:6:6.02:96,6,0
chr10	71053421	.	GAAA	G	714.55	PASS	AB=0.792;AC=8;AF=0.143;AN=56;BaseQRankSum=4.858;DP=530;FS=0.683;HRun=16;HaplotypeScore=84.8290;InbreedingCoeff=0.7112;MQ=74.72;MQ0=1;MQRankSum=-2.182;QD=7.29;ReadPosRankSum=3.724;VQSLOD=-0.4695;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:32:72.15:0,72,1065	0/0:3,0:6:18.04:0,18,277	0/1:29,1:19:4.10:4,0,245	0/0:15,0:15:26.78:0,27,264	0/0:29,0:30:64.05:0,64,933	0/0:16,0:18:36.06:0,36,494	0/0:16,0:18:36.09:0,36,561	0/0:21,0:30:64.40:0,64,874	0/0:15,0:15:39.06:0,39,593	1/1:6,9:17:10.59:213,11,0	0/1:6,10:16:15.08:170,0,15	0/0:12,0:14:30.08:0,30,455	0/0:8,0:12:26.89:0,27,211	0/0:16,0:17:39.07:0,39,564	0/0:16,0:17:36.10:0,36,574	0/0:15,0:18:36.09:0,36,555	0/0:23,0:26:61.39:0,61,940	0/0:13,0:21:51.09:0,51,700	0/0:17,0:21:42.09:0,42,637	0/0:18,0:18:39.09:0,39,542	0/0:7,0:15:24.08:0,24,383	0/0:16,0:17:29.70:0,30,347	0/0:14,0:16:30.04:0,30,364	0/0:6,0:16:14.95:0,15,130	0/0:19,0:21:54.97:0,55,788	1/1:16,11:28:28.36:280,28,0	0/0:15,1:18:9.82:0,10,568	1/1:0,7:7:18.04:193,18,0
chr10	71053654	.	ACGCCCTCACGCAGGTCTGG	A	1596.72	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.035;DP=682;FS=1.045;HRun=0;HaplotypeScore=338.4997;InbreedingCoeff=0.9469;MQ=83.29;MQ0=0;MQRankSum=-3.437;QD=63.87;ReadPosRankSum=0.352;VQSLOD=2.3055;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,154,11075	0/0:4,0:4:12.04:0,12,1021	0/0:24,0:24:66.22:0,66,3163	0/0:16,0:16:45.15:0,45,2863	0/0:23,0:23:69.22:0,69,5790	0/0:13,0:13:39.13:0,39,3307	0/0:34,0:34:99:0,99,7212	0/0:32,0:32:93.32:0,93,6430	0/0:25,0:25:75.24:0,75,5696	1/1:1,15:16:30.10:1345,30,0	1/1:1,8:9:8.74:366,9,0	0/0:28,0:28:84.29:0,84,6478	0/0:25,0:25:75.24:0,75,5771	0/0:32,0:32:93.32:0,93,7441	0/0:17,0:17:51.18:0,51,4406	0/0:14,0:14:42.14:0,42,3810	0/0:36,0:36:99:0,108,9168	0/0:32,0:32:96.33:0,96,7008	0/0:20,0:20:57.20:0,57,3769	0/0:18,0:18:48.16:0,48,3623	0/0:77,0:77:99:0,229,17974	0/0:14,0:14:42.14:0,42,3685	0/0:19,0:19:57.20:0,57,4737	0/0:45,0:45:99:0,135,11400	0/0:11,0:11:27.09:0,27,2443	0/0:23,0:23:66.21:0,66,5120	0/0:18,0:18:51.17:0,51,4278	0/0:6,0:6:18.06:0,18,1618
chr10	71053905	.	G	GC	2875.22	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-0.239;DP=604;FS=1.020;HRun=0;HaplotypeScore=67.6749;InbreedingCoeff=0.9792;MQ=80.44;MQ0=0;MQRankSum=-3.331;QD=40.50;ReadPosRankSum=-0.383;VQSLOD=3.9358;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.29:0,87,1216	0/0:3,0:3:9.03:0,9,126	0/0:19,0:20:59.70:0,60,722	0/0:14,0:14:33.10:0,33,458	0/0:40,0:40:99:0,120,1675	0/0:26,0:26:78.26:0,78,1091	0/0:21,0:21:63.21:0,63,879	0/0:41,0:41:99:0,117,1605	0/0:21,0:21:63.19:0,63,863	1/1:1,30:32:87.30:1385,87,0	1/1:0,16:16:45.15:715,45,0	0/0:18,0:18:54.13:0,54,717	0/0:18,0:18:45.15:0,45,630	0/0:17,0:17:51.17:0,51,713	0/0:24,0:24:72.24:0,72,1007	0/0:25,0:25:75.25:0,75,1048	0/0:22,0:22:66.22:0,66,920	0/0:24,0:24:72.24:0,72,1007	0/0:19,0:19:57.16:0,57,746	0/0:21,0:21:60.20:0,60,839	0/0:18,0:18:54.18:0,54,755	0/0:17,0:17:51.17:0,51,713	0/0:13,0:13:26.87:0,27,369	0/0:23,0:23:66.22:0,66,923	0/0:25,0:25:75.24:0,75,1032	1/1:2,15:18:45.14:695,45,0	0/0:34,0:33:93.31:0,93,1298	1/1:0,5:5:15.05:239,15,0
chr10	71053942	.	G	GA	2092.80	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-4.652;DP=597;FS=4.954;HRun=9;HaplotypeScore=73.6294;InbreedingCoeff=0.9003;MQ=79.87;MQ0=0;MQRankSum=-2.865;QD=17.30;ReadPosRankSum=1.010;VQSLOD=3.8931;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:83.93:0,84,720	0/0:2,0:2:3:0,3,26	0/0:28,1:25:13.64:0,14,301	0/0:23,0:21:41.83:0,42,337	0/0:32,0:32:77.93:0,78,672	0/0:31,0:31:83.33:0,83,711	0/0:22,0:22:53.97:0,54,464	0/0:37,0:37:83.64:0,84,722	0/0:23,0:23:65.98:0,66,573	1/1:9,8:17:1.02:239,1,0	1/1:5,11:16:27.07:296,27,0	0/0:12,0:12:32.99:0,33,286	1/1:0,19:19:32.39:364,32,0	0/0:19,0:19:44.94:0,45,383	0/0:22,0:23:65:0,65,548	0/0:21,0:21:59.98:0,60,520	0/0:18,0:18:44.94:0,45,383	0/0:27,0:27:77.97:0,78,676	0/0:20,0:20:59.99:0,60,520	0/0:23,0:23:59.90:0,60,510	0/0:19,0:19:50.98:0,51,442	0/0:20,0:20:53.98:0,54,468	1/1:3,17:21:35.93:379,36,0	1/1:1,27:28:72.19:796,72,0	0/0:18,0:18:41.94:0,42,364	1/1:9,0:16:33.90:174,34,0	0/0:24,0:24:65.98:0,66,572	1/1:2,0:4:5.68:28,6,0
chr10	71055045	.	C	CT	10347.63	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=18.897;DP=727;FS=0.602;HRun=0;HaplotypeScore=88.5209;InbreedingCoeff=0.9999;MQ=81.85;MQ0=0;MQRankSum=-6.970;QD=43.48;ReadPosRankSum=2.839;VQSLOD=5.1130;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,49:49:99:2249,141,0	0/0:12,0:12:36.12:0,36,503	0/0:20,0:20:34.81:0,35,609	0/0:26,0:26:69.15:0,69,869	0/0:19,0:19:54.17:0,54,738	0/0:19,0:19:57.17:0,57,768	0/0:29,0:29:84.28:0,84,1174	0/0:32,0:32:90.29:0,90,1245	0/0:19,0:19:57.18:0,57,780	1/1:0,26:27:78.25:1188,78,0	1/1:0,17:17:45.15:718,45,0	0/0:30,0:30:87.28:0,87,1199	1/1:1,24:25:60.20:945,60,0	0/0:25,0:25:75.25:0,75,1049	0/0:23,0:23:66.22:0,66,923	0/0:32,0:32:96.31:0,96,1325	0/0:35,0:35:99:0,105,1430	1/1:0,24:24:72.25:1150,72,0	0/0:32,0:32:84.74:0,85,1157	0/0:19,0:19:57.19:0,57,797	0/0:61,0:61:99:0,181,2499	0/0:14,0:14:42.07:0,42,563	1/1:1,14:15:42.14:670,42,0	1/1:3,42:45:57.54:1801,58,0	0/0:20,0:20:57.19:0,57,797	1/1:0,25:25:75.24:1177,75,0	0/0:22,0:22:66.22:0,66,923	1/1:0,11:11:30.03:449,30,0
chr10	71056094	.	G	GA	1398.86	PASS	AB=0.848;AC=15;AF=0.268;AN=56;BaseQRankSum=0.915;DP=631;FS=1.473;HRun=13;HaplotypeScore=93.3796;InbreedingCoeff=0.5489;MQ=77.02;MQ0=2;MQRankSum=0.805;QD=7.06;ReadPosRankSum=-2.016;VQSLOD=2.4483;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,2:23:34.99:202,35,0	0/0:11,0:12:24.86:0,25,155	0/0:26,0:22:25.03:0,25,163	0/0:19,0:18:0.10:0,0,39	0/0:24,0:24:53.43:0,53,366	0/0:39,0:40:79.07:0,79,533	0/0:22,0:23:64.52:0,65,437	0/0:30,0:31:54.55:0,55,372	0/0:24,0:26:59.82:0,60,400	1/1:10,19:31:55.98:509,56,0	0/1:5,9:14:2.44:113,0,2	0/0:18,1:21:41.11:0,41,274	0/0:13,0:15:31.76:0,32,210	0/0:13,0:14:13.71:0,14,88	0/1:20,3:24:30.98:31,0,239	0/0:27,0:33:69.51:0,70,439	0/0:22,2:27:31.61:0,32,335	1/1:3,2:18:28.57:157,29,0	0/1:19,1:22:17.71:18,0,157	0/0:20,0:20:18.42:0,18,245	0/1:12,2:14:28.96:29,0,117	0/0:27,0:29:26.69:0,27,312	0/0:24,0:24:17.89:0,18,260	0/1:8,1:10:4.97:5,0,106	0/0:22,0:25:51.54:0,52,340	1/1:21,14:37:33.97:447,34,0	0/0:19,0:21:39.67:0,40,270	1/1:0,4:5:8.85:70,9,0
chr10	71059195	.	GC	G	7630.66	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.920;DP=813;FS=1.285;HRun=3;HaplotypeScore=77.9305;InbreedingCoeff=0.9998;MQ=90.65;MQ0=1;MQRankSum=-3.430;QD=31.93;ReadPosRankSum=-1.770;VQSLOD=4.2455;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,47:48:99:1562,126,0	0/0:12,0:12:36.11:0,36,502	0/0:32,0:32:78.59:0,79,1133	0/0:35,0:35:90.23:0,90,1243	0/0:38,0:38:99:0,114,1620	0/0:18,0:18:51.17:0,51,735	0/0:20,0:20:60.20:0,60,864	0/0:28,0:28:81.26:0,81,1149	0/0:31,0:31:87.29:0,87,1253	1/1:1,38:38:99:1219,105,0	1/1:0,14:14:30.09:372,30,0	0/0:35,0:35:99:0,102,1465	1/1:1,28:29:81.25:999,81,0	0/0:29,0:29:84.28:0,84,1205	0/0:47,0:47:99:0,141,2010	0/0:32,0:32:96.32:0,96,1382	0/0:35,0:34:99:0,99,1403	1/1:0,26:26:75.24:930,75,0	0/0:23,0:23:69.21:0,69,966	0/0:30,0:30:90.30:0,90,1294	0/0:44,0:44:99:0,129,1805	0/0:32,0:32:90.26:0,90,1272	1/1:1,19:20:39.12:483,39,0	1/1:2,17:19:36.11:446,36,0	0/0:26,0:26:75.24:0,75,1062	1/1:0,33:33:99:1211,99,0	0/0:27,0:27:81.27:0,81,1164	1/1:0,11:11:33.10:409,33,0
chr10	71059426	.	AAGAG	A	361.01	PASS	AB=0.845;AC=10;AF=0.185;AN=54;BaseQRankSum=0.397;DP=661;FS=5.031;HRun=0;HaplotypeScore=128.0652;InbreedingCoeff=0.2636;MQ=67.08;MQ0=9;MQRankSum=-1.445;QD=2.31;ReadPosRankSum=0.114;VQSLOD=2.1094;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:3.63:0,4,14	0/0:3,0:4:8.98:0,9,117	./.	0/0:51,0:30:1.87:0,2,7	0/0:25,0:26:32.17:0,32,425	0/0:16,0:15:14.11:0,14,235	0/0:29,0:34:29.80:0,30,554	0/1:22,0:29:0:0,0,0	0/0:25,0:27:47.85:0,48,916	0/0:17,0:16:17.04:0,17,187	0/0:15,0:12:18.04:0,18,280	0/0:23,0:23:14.51:0,15,203	0/0:21,0:21:33.41:0,33,389	0/0:9,0:9:9:0,9,118	0/0:31,0:34:47.75:0,48,792	0/1:20,2:22:19.88:20,0,308	0/0:44,0:46:71.25:0,71,1168	1/1:7,0:7:6.01:56,6,0	0/1:13,3:16:11.98:41,0,12	0/1:14,2:17:31.87:127,0,32	0/1:20,7:27:34.82:38,0,35	0/0:21,0:21:8.97:0,9,208	0/0:20,0:21:33.03:0,33,443	0/0:44,0:42:33.08:0,33,502	0/1:12,0:14:1.38:1,0,252	0/0:28,0:27:50.21:0,50,531	1/1:17,3:22:8.62:211,9,0	0/0:9,0:9:8.98:0,9,72
chr10	71059455	.	AGAGAGAGAGAGAGAGC	A	520.15	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=6.124;DP=649;FS=0.000;HRun=0;HaplotypeScore=256.1204;InbreedingCoeff=0.4893;MQ=59.96;MQ0=12;MQRankSum=-1.140;QD=6.58;ReadPosRankSum=-4.593;VQSLOD=1.4950;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,18:29:17.96:284,18,0	0/0:9,0:9:11.04:0,11,768	0/0:21,0:7:3.85:0,4,50	0/0:30,0:15:19.52:0,20,249	0/0:32,0:32:76.40:0,76,3021	0/0:21,0:21:27.67:0,28,1750	0/0:26,0:26:56.78:0,57,2425	0/0:28,0:27:57.86:0,58,519	0/0:21,0:21:51.15:0,51,3407	0/1:16,0:15:23.24:23,0,1096	0/1:20,0:17:34.61:35,0,862	0/0:23,0:23:60.10:0,60,1962	0/0:21,0:20:49.39:0,49,1997	0/0:15,0:15:35.90:0,36,1040	0/0:27,0:27:75.24:0,75,4036	0/0:21,0:21:51.12:0,51,2077	0/0:54,0:54:99:0,141,6218	1/1:5,0:5:14.98:309,15,0	0/0:14,0:14:39.94:0,40,872	0/0:20,0:19:55.09:0,55,1572	0/0:28,0:28:50.09:0,50,1150	0/0:22,0:22:45.06:0,45,1611	0/0:27,0:27:56.46:0,56,2062	0/0:45,0:43:42.14:0,42,2301	0/0:18,0:18:45.11:0,45,1899	0/0:23,0:23:21.15:0,21,2136	0/0:24,0:23:64.24:0,64,1910	0/1:9,0:8:4.17:4,0,410
chr10	71059469	.	A	AGAGC	1396.35	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=0.474;DP=616;FS=8.154;HRun=0;HaplotypeScore=145.5206;InbreedingCoeff=0.6816;MQ=67.41;MQ0=8;MQRankSum=-1.182;QD=10.82;ReadPosRankSum=-3.030;VQSLOD=2.2106;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:17.88:0,18,136	0/0:10,0:10:7.77:0,8,207	0/0:22,0:11:12.94:0,13,164	0/0:34,0:24:44.61:0,45,472	0/0:32,0:32:14.82:0,15,499	0/0:15,0:15:31.81:0,32,320	0/0:23,0:23:39.17:0,39,595	0/0:26,0:26:50.71:0,51,448	0/0:19,0:19:24.39:0,24,707	0/1:16,0:15:32.44:32,0,100	0/0:18,0:16:35.18:0,35,197	0/0:17,0:17:40.36:0,40,368	1/1:19,1:21:37.91:459,38,0	0/0:14,0:14:35.69:0,36,304	0/0:35,0:35:85.07:0,85,1004	0/0:20,0:20:41.74:0,42,469	0/0:48,0:48:99:0,117,1376	0/0:7,0:7:17.95:0,18,147	0/0:16,0:16:41.65:0,42,372	0/0:15,0:14:38.78:0,39,320	0/0:26,0:26:36.68:0,37,297	0/0:18,0:18:35.99:0,36,343	1/1:24,2:26:24.20:504,24,0	1/1:6,28:41:16.38:542,16,0	0/0:15,0:15:24.21:0,24,389	0/1:24,0:24:10.27:10,0,198	0/0:19,0:19:49.19:0,49,430	0/0:13,0:12:17.68:0,18,83
chr10	71059471	.	CGA	C	1299.52	PASS	AB=0.926;AC=8;AF=0.143;AN=56;BaseQRankSum=3.345;DP=591;FS=35.182;HRun=0;HaplotypeScore=117.5812;InbreedingCoeff=0.4778;MQ=68.63;MQ0=7;MQRankSum=-2.277;QD=13.26;ReadPosRankSum=-1.855;VQSLOD=1.4243;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:1.80:14,0,2	0/0:10,0:10:22.89:0,23,353	0/0:27,0:16:29.25:0,29,336	0/0:36,0:24:43.06:0,43,824	0/0:30,0:30:51.90:0,52,989	0/0:13,0:13:33.06:0,33,537	0/0:23,0:23:53.95:0,54,819	0/0:26,0:26:54.44:0,54,831	0/0:19,0:19:47.88:0,48,807	1/1:15,1:15:8.57:353,9,0	0/1:14,2:15:28.31:284,0,28	0/0:18,0:18:44.69:0,45,520	0/0:20,0:19:12.03:0,12,385	0/0:14,0:14:36:0,36,500	0/0:35,0:35:92.50:0,93,1288	0/0:18,0:18:41.98:0,42,663	0/0:44,0:44:99:0,114,1684	0/1:8,0:8:11.35:16,0,11	0/0:15,0:15:35.29:0,35,544	0/0:15,0:14:21.80:0,22,480	0/0:24,0:24:47.48:0,47,544	0/0:18,0:18:45.14:0,45,708	0/0:25,0:25:15.92:0,16,601	0/0:31,0:31:36.09:0,36,475	0/0:14,0:14:35.89:0,36,548	0/1:17,5:22:24.56:475,0,25	0/0:18,0:18:40.75:0,41,449	1/1:10,0:9:21.07:300,21,0
chr10	71059541	.	GT	G	16390.53	PASS	AB=0.816;AC=54;AF=0.964;AN=56;BaseQRankSum=-4.937;DP=468;FS=0.000;HRun=1;HaplotypeScore=71.1426;InbreedingCoeff=-0.0380;MQ=66.47;MQ0=4;MQRankSum=-3.999;QD=35.02;ReadPosRankSum=3.601;VQSLOD=4.8182;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:15:33.11:460,33,0	1/1:0,10:10:27.09:373,27,0	0/1:19,5:11:61.90:147,0,62	0/1:28,8:17:31.82:258,0,32	1/1:0,25:25:75.25:1041,75,0	1/1:0,16:16:45.15:629,45,0	1/1:0,16:16:39.13:545,39,0	1/1:0,27:27:78.16:1054,78,0	1/1:0,14:14:42.14:587,42,0	1/1:0,16:16:48.12:649,48,0	1/1:0,11:11:33.11:442,33,0	1/1:0,11:11:33.11:460,33,0	1/1:0,14:13:39.13:545,39,0	1/1:0,13:13:39.13:545,39,0	1/1:0,27:27:81.27:1132,81,0	1/1:0,20:20:54.18:754,54,0	1/1:0,24:24:66.22:922,66,0	1/1:0,7:7:21.07:299,21,0	1/1:0,15:15:42.14:587,42,0	1/1:0,15:15:45.11:607,45,0	1/1:0,17:17:42.14:587,42,0	1/1:0,19:19:57.19:797,57,0	1/1:0,13:13:36.12:497,36,0	1/1:0,7:7:15.05:210,15,0	1/1:0,11:11:33.11:458,33,0	1/1:0,20:20:60.20:839,60,0	1/1:0,16:16:48.16:671,48,0	1/1:0,7:7:21.07:293,21,0
chr10	71059548	.	CAGGG	C	2682.20	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=9.905;DP=456;FS=2.417;HRun=0;HaplotypeScore=140.4630;InbreedingCoeff=0.8516;MQ=65.49;MQ0=1;MQRankSum=-10.060;QD=21.63;ReadPosRankSum=-0.228;VQSLOD=3.6093;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,8:16:20.94:288,21,0	0/0:11,0:11:21.07:0,21,521	0/1:15,0:10:21.56:22,0,224	0/0:24,0:14:4.94:0,5,71	0/0:26,0:26:54.18:0,54,1264	0/0:14,0:14:36.11:0,36,844	0/0:16,0:16:27.07:0,27,476	0/0:29,0:29:54.17:0,54,1200	0/0:16,0:16:42.14:0,42,1004	1/1:6,8:14:24.08:402,24,0	1/1:3,9:12:24.07:378,24,0	0/0:13,0:13:33.11:0,33,818	1/1:2,13:14:36.01:537,36,0	0/0:13,0:13:33.11:0,33,776	0/0:28,0:28:51.17:0,51,1225	0/0:21,0:21:51.16:0,51,1212	0/0:24,0:24:51.09:0,51,1153	1/1:5,3:8:18.03:261,18,0	0/0:16,0:15:33.10:0,33,691	0/0:14,0:14:39.12:0,39,914	0/0:15,0:15:30.09:0,30,695	0/0:20,0:20:45.15:0,45,1042	1/1:5,8:13:15.01:221,15,0	1/1:5,2:7:6.02:81,6,0	0/0:12,0:12:27.08:0,27,620	1/1:7,12:19:39.13:647,39,0	0/0:20,0:20:54.12:0,54,1263	1/1:3,1:4:3.01:50,3,0
chr10	71060245	.	TA	T	2882.16	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.882;DP=581;FS=14.353;HRun=10;HaplotypeScore=62.2996;InbreedingCoeff=0.9513;MQ=74.73;MQ0=0;MQRankSum=-2.508;QD=20.15;ReadPosRankSum=2.563;VQSLOD=3.4154;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:34:83.97:729,84,0	0/0:8,0:8:24.06:0,24,266	0/0:20,0:18:36.08:0,36,385	0/0:17,1:17:1.01:0,1,228	0/0:24,1:25:40.11:0,40,664	0/0:16,0:16:36.09:0,36,391	0/0:14,2:16:19.07:0,19,439	0/0:31,0:31:78.19:0,78,848	0/0:13,0:13:27.07:0,27,299	0/0:5,0:28:68.75:0,69,382	0/0:6,0:19:31.73:0,32,177	0/0:25,0:25:66.18:0,66,730	1/1:3,20:23:59.98:521,60,0	0/0:23,0:23:60.15:0,60,653	0/0:15,0:15:30.08:0,30,332	0/0:26,0:26:63.16:0,63,689	0/0:29,2:31:14.09:0,14,611	1/1:1,13:14:35.99:313,36,0	0/0:18,0:18:42.07:0,42,445	0/0:28,2:30:32.18:0,32,796	0/0:16,1:17:18.93:0,19,420	0/0:21,0:21:48.08:0,48,494	1/1:0,7:7:21:182,21,0	1/1:2,12:14:29.99:260,30,0	0/0:11,0:11:33.08:0,33,359	1/1:5,31:37:81.59:787,82,0	0/0:26,0:25:60.06:0,60,606	1/1:1,13:14:32.99:286,33,0
chr10	71061395	.	T	TA	965.58	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.578;DP=621;FS=0.000;HRun=7;HaplotypeScore=56.8371;InbreedingCoeff=0.9874;MQ=78.51;MQ0=0;MQRankSum=-2.214;QD=29.26;ReadPosRankSum=1.360;VQSLOD=4.1229;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.12:0,90,862	0/0:8,0:8:21.03:0,21,203	0/0:21,0:21:49.45:0,49,438	0/0:7,0:7:15.02:0,15,145	0/0:26,0:25:78.11:0,78,748	0/0:21,0:21:54.07:0,54,515	0/0:25,0:25:75.10:0,75,717	0/0:32,0:32:66.07:0,66,629	0/0:21,0:21:63.07:0,63,596	1/1:1,20:21:60.18:725,60,0	1/1:3,9:12:30.09:362,30,0	0/0:27,0:27:69.10:0,69,666	0/0:22,0:22:57.08:0,57,550	0/0:23,0:23:63.10:0,63,608	0/0:20,0:20:48.07:0,48,464	0/0:18,0:18:51.06:0,51,482	0/0:33,0:33:93.14:0,93,892	0/0:28,0:28:66.10:0,66,637	0/0:27,0:27:75.11:0,75,720	0/0:23,0:23:54.07:0,54,515	0/0:29,0:29:81.11:0,81,777	0/0:18,0:18:51.08:0,51,492	0/0:22,0:22:57.04:0,57,539	0/0:16,0:16:45.07:0,45,435	0/0:23,0:23:60.09:0,60,579	0/0:33,1:34:56.91:0,57,833	0/0:25,0:25:63.10:0,63,608	0/0:8,0:8:21.03:0,21,202
chr10	71063232	.	TAC	T	134.60	PASS	AB=0.911;AC=13;AF=0.232;AN=56;BaseQRankSum=2.460;DP=569;FS=7.811;HRun=0;HaplotypeScore=83.3049;InbreedingCoeff=-0.0801;MQ=60.60;MQ0=8;MQRankSum=2.291;QD=0.58;ReadPosRankSum=2.845;VQSLOD=0.8212;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:16.31:0,16,163	0/0:12,0:12:15.03:0,15,201	0/0:35,0:20:2.68:0,3,11	0/0:22,0:9:1.25:0,1,3	0/0:12,0:12:18.04:0,18,245	0/1:11,1:12:15.35:15,0,164	0/1:23,2:25:0.27:0,0,421	0/0:21,0:21:5.38:0,5,54	0/1:17,2:19:60.17:60,0,266	0/0:21,0:20:32.87:0,33,298	0/1:17,0:17:0:0,0,0	0/1:18,3:21:42.65:43,0,243	0/0:11,0:21:18.93:0,19,154	0/0:10,0:10:9.02:0,9,110	0/1:18,2:21:30.77:31,0,324	0/1:22,1:24:2.45:2,0,498	0/1:25,3:28:48.98:49,0,558	0/0:13,0:20:11.58:0,12,79	1/1:15,0:13:1.58:31,2,0	0/0:10,0:10:12.02:0,12,159	0/0:43,3:46:11.36:0,11,870	0/1:12,1:13:12.99:13,0,169	0/0:7,0:17:9.70:0,10,78	0/0:13,0:23:14.67:0,15,131	0/1:14,2:17:17.44:17,0,313	0/0:26,0:25:46.81:0,47,444	0/1:18,3:21:3.28:3,0,373	0/0:6,0:6:8.51:0,9,85
chr10	71063664	.	GC	G	1181.70	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.104;DP=733;FS=0.632;HRun=2;HaplotypeScore=75.8035;InbreedingCoeff=0.9955;MQ=83.72;MQ0=0;MQRankSum=0.770;QD=31.94;ReadPosRankSum=2.087;VQSLOD=3.5549;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,169,2492	0/0:10,0:10:30.10:0,30,449	0/0:26,0:26:75.22:0,75,1069	0/0:20,0:20:60.16:0,60,848	0/0:32,0:32:90.29:0,90,1327	0/0:18,0:18:54.17:0,54,787	0/0:24,0:24:72.23:0,72,1059	0/0:36,0:36:99:0,105,1500	0/0:26,0:26:78.24:0,78,1131	0/0:30,0:30:87.27:0,87,1250	0/0:20,0:20:54.12:0,54,745	0/0:40,0:40:99:0,117,1730	0/0:36,0:36:99:0,105,1573	0/0:23,0:23:69.23:0,69,1034	0/0:37,0:37:99:0,111,1623	0/0:30,0:30:87.29:0,87,1304	0/0:27,0:26:81.27:0,81,1210	0/0:20,0:20:60.20:0,60,892	0/0:27,0:27:75.22:0,75,1081	0/0:23,0:23:69.23:0,69,1034	0/0:40,0:40:99:0,120,1773	0/0:16,0:16:45.14:0,45,654	0/0:14,0:14:39.11:0,39,548	0/0:24,0:24:69.23:0,69,1034	0/0:17,0:17:51.16:0,51,745	1/1:2,29:31:45.34:1068,45,0	0/0:23,0:23:66.22:0,66,985	1/1:0,6:6:18.06:234,18,0
chr10	71064356	.	T	TC	6636.72	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-8.950;DP=737;FS=0.337;HRun=2;HaplotypeScore=70.4218;InbreedingCoeff=0.9997;MQ=86.46;MQ0=0;MQRankSum=-2.634;QD=43.95;ReadPosRankSum=1.250;VQSLOD=4.2209;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,59:59:99:2637,166,0	0/0:9,0:9:27.09:0,27,378	0/0:24,0:24:60.15:0,60,761	0/0:25,0:25:68.53:0,69,826	0/0:31,0:31:87.25:0,87,1179	0/0:28,0:28:84.25:0,84,1139	0/0:21,0:21:63.19:0,63,861	0/0:33,0:33:99:0,99,1329	0/0:21,0:21:63.18:0,63,844	1/1:0,27:27:81.25:1249,81,0	1/1:0,19:19:51.17:815,51,0	0/0:21,0:21:63.18:0,63,845	0/0:23,0:23:66.21:0,66,905	0/0:25,0:25:75.24:0,75,1031	0/0:27,0:27:78.26:0,78,1091	0/0:41,0:41:99:0,123,1702	0/0:31,0:31:93.31:0,93,1287	1/1:2,15:17:42.11:644,42,0	0/0:20,0:20:60.20:0,60,838	0/0:25,0:25:75.24:0,75,1032	0/0:52,0:52:99:0,153,2080	0/0:23,0:23:69.22:0,69,949	0/0:20,0:20:60.20:0,60,839	0/0:32,0:32:96.31:0,96,1325	0/0:22,0:22:66.22:0,66,923	1/1:0,18:18:54.11:764,54,0	0/0:32,0:32:96.31:0,96,1325	1/1:0,11:11:33.11:527,33,0
chr10	71064650	.	G	GT	293.21	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.941;DP=609;FS=0.968;HRun=8;HaplotypeScore=69.2126;InbreedingCoeff=0.8425;MQ=72.90;MQ0=0;MQRankSum=-3.957;QD=8.38;ReadPosRankSum=-0.472;VQSLOD=1.3241;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:44.99:0,45,406	0/0:12,0:12:33.02:0,33,302	0/0:10,0:10:15:0,15,132	0/0:9,0:9:5.02:0,5,63	0/0:37,0:37:98.24:0,98,877	0/0:18,0:18:48.02:0,48,439	0/0:18,0:18:51.01:0,51,461	0/0:36,0:36:87:0,87,785	0/0:21,0:21:57:0,57,516	0/0:17,0:17:42.43:0,42,176	0/0:27,0:27:69.25:0,69,334	0/0:31,0:31:90:0,90,810	0/0:26,0:26:75.04:0,75,686	0/0:19,0:19:51.02:0,51,467	0/0:27,0:27:75.01:0,75,681	0/0:21,0:21:63.03:0,63,577	0/0:25,0:25:72.02:0,72,654	0/0:27,1:28:40.37:0,40,612	0/0:14,0:14:42.02:0,42,384	0/0:27,0:27:72.03:0,72,659	0/0:11,0:11:33.01:0,33,299	0/0:31,0:31:78.02:0,78,714	0/0:20,0:20:54:0,54,489	0/0:7,0:7:17.98:0,18,157	0/0:25,0:25:72.01:0,72,654	1/1:12,7:19:4.41:226,4,0	0/0:40,0:39:99:0,111,1005	1/1:9,7:16:15.04:173,15,0
chr10	71064949	.	AG	A	5074.82	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.487;DP=832;FS=11.943;HRun=4;HaplotypeScore=93.9867;InbreedingCoeff=0.9999;MQ=83.02;MQ0=0;MQRankSum=-0.765;QD=33.61;ReadPosRankSum=1.808;VQSLOD=4.3719;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1621	0/0:11,0:11:33.11:0,33,462	0/0:33,0:33:72.18:0,72,971	0/0:28,0:27:69.23:0,69,938	0/0:30,0:30:87.24:0,87,1147	0/0:29,0:29:87.29:0,87,1218	0/0:25,0:25:72.23:0,72,990	0/0:32,0:32:90.26:0,90,1225	0/0:27,0:27:75.24:0,75,1033	1/1:1,31:32:93.28:1115,93,0	1/1:2,18:20:54.17:648,54,0	0/0:35,0:35:99:0,99,1352	1/1:2,30:32:87.27:1044,87,0	0/0:32,0:32:93.28:0,93,1280	0/0:43,0:43:99:0,126,1764	0/0:44,0:44:99:0,132,1817	0/0:26,0:26:72.24:0,72,1007	0/0:18,0:18:54.18:0,54,756	0/0:25,0:25:69.22:0,69,949	0/0:18,0:18:51.16:0,51,697	0/0:43,0:43:99:0,111,1553	0/0:30,0:30:84.28:0,84,1175	1/1:3,32:35:93.28:1116,93,0	1/1:0,32:32:96.29:1152,96,0	0/0:23,0:23:66.22:0,66,924	0/0:38,1:39:78.33:0,78,1457	0/0:24,0:24:69.21:0,69,948	0/0:26,0:26:78.25:0,78,1075
chr10	71066232	.	AT	A	1915.46	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.414;DP=692;FS=15.308;HRun=7;HaplotypeScore=69.1578;InbreedingCoeff=0.9992;MQ=78.06;MQ0=0;MQRankSum=-3.021;QD=23.94;ReadPosRankSum=3.216;VQSLOD=2.6118;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,150,1784	0/0:15,0:15:39.10:0,39,464	0/0:26,0:25:65.66:0,66,723	0/0:23,0:22:53.34:0,53,557	0/0:38,0:38:99:0,108,1357	0/0:25,0:25:69.19:0,69,841	0/0:30,0:30:87.26:0,87,1080	0/0:27,0:27:64.06:0,64,753	0/0:22,0:22:54.16:0,54,667	0/0:16,0:16:36.11:0,36,441	0/0:19,0:19:53.88:0,54,635	0/0:16,0:16:45.14:0,45,566	1/1:3,21:24:60.13:611,60,0	0/0:27,0:27:81.26:0,81,1019	0/0:30,0:30:84.23:0,84,1028	0/0:26,0:26:69.21:0,69,857	0/0:26,0:25:72.14:0,72,858	0/0:23,0:23:69.14:0,69,809	0/0:22,0:22:66.20:0,66,810	0/0:23,0:23:66.20:0,66,817	0/0:23,0:23:66.18:0,66,803	0/0:16,0:16:48.13:0,48,579	1/1:0,23:23:62.73:621,63,0	1/1:3,30:33:81.18:826,81,0	0/0:28,0:28:75.22:0,75,920	0/0:25,0:25:60.17:0,60,720	0/0:21,0:21:63.20:0,63,790	0/0:11,0:11:24.01:0,24,258
chr10	71067522	.	C	CGTGT	6518.02	PASS	AB=0.789;AC=20;AF=0.357;AN=56;BaseQRankSum=1.564;DP=765;FS=1.691;HRun=0;HaplotypeScore=155.9743;InbreedingCoeff=0.7114;MQ=66.16;MQ0=14;MQRankSum=-3.204;QD=21.87;ReadPosRankSum=-0.266;VQSLOD=4.7920;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:28:3.01:39,3,0	0/0:10,0:10:21.07:0,21,339	0/0:28,0:13:3.01:0,3,44	0/0:32,0:16:3.48:0,3,33	0/0:23,0:26:51.14:0,51,739	0/0:22,0:24:43.02:0,43,657	0/0:31,0:33:60.20:0,60,935	0/0:24,0:24:39.13:0,39,610	0/0:22,0:22:9.55:0,10,779	1/1:26,0:26:45.08:586,45,0	1/1:16,0:16:2.98:52,3,0	0/0:30,0:34:75.24:0,75,1144	1/1:11,23:35:71.72:1618,72,0	0/0:22,0:22:56.68:0,57,881	0/0:38,0:40:96.26:0,96,1434	0/0:26,0:27:56.66:0,57,1046	0/1:10,1:36:69.76:270,0,70	1/1:9,0:16:15.05:242,15,0	0/1:15,0:16:22.12:22,0,180	0/0:30,0:30:41.88:0,42,658	0/0:46,0:53:74.42:0,74,1178	0/0:12,0:16:26.46:0,26,528	1/1:12,15:32:13.21:731,13,0	1/1:7,30:42:88.98:1873,89,0	0/0:17,0:17:30.10:0,30,485	1/1:26,0:39:60.99:982,61,0	0/0:27,0:28:26.57:0,27,566	1/1:5,0:5:6.02:101,6,0
chr10	71067578	.	ACACACAGT	A	164.46	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=3.579;DP=775;FS=9.768;HRun=0;HaplotypeScore=206.2736;InbreedingCoeff=0.9299;MQ=68.62;MQ0=6;MQRankSum=0.006;QD=20.56;ReadPosRankSum=-1.142;VQSLOD=1.8395;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:10,0:10:27.09:0,27,1087	0/0:36,0:25:58.26:0,58,2147	0/0:53,0:33:44.96:0,45,2313	0/0:26,0:26:69.24:0,69,2895	0/0:18,0:18:48.16:0,48,1981	0/0:31,0:31:78.27:0,78,3271	0/0:36,0:36:99:0,102,4123	0/0:24,0:24:69.24:0,69,2877	0/0:23,0:23:66.19:0,66,2677	0/0:16,0:16:32.89:0,33,1417	0/0:34,0:34:84.29:0,84,3383	0/0:23,0:23:57.15:0,57,2176	0/0:30,0:30:81.26:0,81,3226	0/0:34,0:34:96.33:0,96,3968	0/0:38,0:38:99:0,105,4308	0/0:36,0:35:96.30:0,96,3796	1/1:4,4:8:9.03:247,9,0	0/0:20,0:19:54.19:0,54,2135	0/0:19,0:19:51.17:0,51,2022	0/0:64,0:64:99:0,172,6830	0/0:27,0:27:69.24:0,69,2796	0/0:29,0:29:69.24:0,69,2872	0/0:33,0:32:78.25:0,78,3288	0/0:25,0:25:72.25:0,72,2937	0/0:23,0:23:63.22:0,63,2705	0/0:27,0:27:78.27:0,78,3220	0/0:6,0:6:18.06:0,18,783
chr10	71068687	.	GATGTTATTACAACAA	G	14856.01	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=16.328;DP=670;FS=10.713;HRun=0;HaplotypeScore=275.4383;InbreedingCoeff=0.9874;MQ=87.08;MQ0=0;MQRankSum=-14.650;QD=99.70;ReadPosRankSum=3.982;VQSLOD=3.4605;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:30.10:1339,30,0	0/0:14,0:14:42.14:0,42,2656	0/0:28,0:28:84.28:0,84,4546	0/0:21,0:21:63.22:0,63,3461	0/0:17,0:17:51.16:0,51,3273	0/0:24,0:24:72.25:0,72,4962	0/0:32,0:32:96.33:0,96,6048	0/0:39,0:39:99:0,117,7114	0/0:29,0:29:87.30:0,87,5969	1/1:0,23:23:69.21:2819,69,0	1/1:0,13:13:32.94:1186,33,0	0/0:27,0:27:81.28:0,81,5504	1/1:0,23:23:63.22:2894,63,0	0/0:28,0:28:84.29:0,84,5707	0/0:38,0:38:99:0,114,7611	0/0:33,0:33:99:0,99,6741	0/0:24,0:24:72.19:0,72,4515	1/1:0,13:13:20.94:713,21,0	0/0:20,0:20:60.21:0,60,3171	0/0:11,0:11:33.11:0,33,2042	0/0:54,0:54:99:0,163,10592	0/0:25,0:25:75.26:0,75,4958	1/1:0,20:20:47.99:1950,48,0	1/1:0,9:9:8.95:277,9,0	0/0:25,0:25:75.26:0,75,4993	1/1:0,24:24:72.25:2979,72,0	0/0:32,0:32:96.32:0,96,6601	1/1:0,8:8:15.05:698,15,0
chr10	71068833	.	CA	C	829.54	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=5.741;DP=663;FS=0.000;HRun=4;HaplotypeScore=85.5621;InbreedingCoeff=0.7888;MQ=71.27;MQ0=4;MQRankSum=2.486;QD=14.55;ReadPosRankSum=-1.319;VQSLOD=2.4274;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:74.76:0,75,402	0/0:9,0:9:21.93:0,22,274	0/0:31,0:20:13.03:0,13,334	0/1:18,0:9:8.98:9,0,136	0/0:29,0:29:79.18:0,79,939	0/0:20,0:20:57.40:0,57,713	0/0:30,0:30:88.10:0,88,1124	0/0:34,0:34:99:0,99,1271	0/0:16,0:16:33.06:0,33,444	0/0:27,0:27:56.70:0,57,346	0/0:31,0:31:38.63:0,39,340	0/0:22,0:22:66.15:0,66,862	0/0:12,0:12:33.07:0,33,435	0/0:24,0:24:71.37:0,71,869	0/0:31,0:31:78.28:0,78,902	0/0:28,0:27:75.62:0,76,970	0/0:21,0:21:55.83:0,56,619	0/0:16,0:17:25.77:0,26,134	0/0:23,0:23:61.56:0,62,705	0/0:20,0:20:58.69:0,59,760	0/0:17,0:17:47.12:0,47,608	0/0:26,0:26:78.13:0,78,950	0/0:21,0:21:59.91:0,60,800	0/0:9,0:9:21.03:0,21,281	0/0:22,0:22:59.60:0,60,739	1/1:4,18:22:42.83:504,43,0	0/0:39,0:39:99:0,117,1344	1/1:1,16:17:36.10:444,36,0
chr10	71068835	.	A	AAT	1788.10	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.809;DP=669;FS=10.425;HRun=0;HaplotypeScore=101.5762;InbreedingCoeff=0.9507;MQ=71.73;MQ0=4;MQRankSum=-1.260;QD=27.51;ReadPosRankSum=0.976;VQSLOD=4.6597;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,44:47:78.18:1430,78,0	0/0:8,0:9:24.85:0,25,282	0/0:32,0:22:11.93:0,12,324	0/0:18,0:9:8.81:0,9,116	0/0:30,0:32:83.02:0,83,991	0/0:21,0:21:56.43:0,56,724	0/0:30,0:31:93.12:0,93,1186	0/0:33,0:36:91.92:0,92,1247	0/0:14,0:16:48.02:0,48,486	0/0:5,0:25:75.15:0,75,814	0/0:7,0:30:89.68:0,90,839	0/0:22,0:22:66.06:0,66,801	0/0:12,0:12:29.98:0,30,372	0/0:23,0:24:68.80:0,69,827	0/0:29,0:31:59:0,59,861	0/0:27,0:28:80.97:0,81,1028	0/0:18,0:20:37.79:0,38,591	1/1:1,14:17:27.08:479,27,0	0/0:18,0:23:46.73:0,47,706	0/0:20,0:21:57.12:0,57,807	0/0:16,0:17:48.10:0,48,645	0/0:25,0:26:77.65:0,78,947	0/0:19,0:20:59.70:0,60,759	0/0:9,0:9:21.04:0,21,302	0/0:21,0:22:62.83:0,63,789	0/0:21,0:22:58.13:0,58,372	0/0:36,0:38:99:0,113,1241	0/0:17,0:17:35.18:0,35,207
chr10	71069007	.	TAAAG	T	5244.58	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.579;DP=662;FS=0.000;HRun=0;HaplotypeScore=110.2193;InbreedingCoeff=0.9936;MQ=81.16;MQ0=3;MQRankSum=-3.335;QD=41.96;ReadPosRankSum=1.049;VQSLOD=4.7733;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,39:41:99:1756,99,0	0/0:17,0:17:48.16:0,48,1209	0/0:24,0:23:63.22:0,63,1617	0/0:15,0:16:37.89:0,38,871	0/0:26,0:26:72.24:0,72,1830	0/0:28,0:28:78.27:0,78,2043	0/0:31,0:31:84.26:0,84,2056	0/0:32,0:32:90.31:0,90,2352	0/0:24,0:24:63.22:0,63,1611	1/1:1,15:16:45.15:809,45,0	1/1:2,19:20:36.12:584,36,0	0/0:22,0:22:63.22:0,63,1651	0/0:17,0:17:48.16:0,48,1205	0/0:21,0:21:57.67:0,58,1486	0/0:30,0:30:69.24:0,69,1808	0/0:29,0:29:84.29:0,84,2159	0/0:32,0:32:90.31:0,90,2357	1/1:1,10:11:30.10:546,30,0	0/0:22,0:22:66.23:0,66,1704	0/0:14,0:14:39.13:0,39,1021	0/0:28,0:27:75.26:0,75,1965	0/0:23,0:23:66.23:0,66,1681	0/0:25,0:25:75.21:0,75,1842	0/0:26,0:26:76.50:0,77,1968	0/0:23,0:23:66.23:0,66,1715	1/1:1,28:28:75.24:1332,75,0	0/0:27,0:27:75.26:0,75,1938	1/1:1,5:6:12.04:218,12,0
chr10	71069566	.	AAC	A	74.55	PASS	AB=0.915;AC=9;AF=0.161;AN=56;BaseQRankSum=3.721;DP=614;FS=1.825;HRun=0;HaplotypeScore=96.9654;InbreedingCoeff=-0.0091;MQ=61.02;MQ0=10;MQRankSum=0.420;QD=0.39;ReadPosRankSum=-0.663;VQSLOD=1.5666;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:26:0.07:1,0,0	0/0:10,0:10:24.06:0,24,352	0/0:43,0:22:17.09:0,17,226	0/0:30,0:11:3.01:0,3,47	0/0:13,0:15:18.14:0,18,364	0/0:17,1:20:16.15:0,16,672	0/0:24,1:25:16.17:0,16,712	0/1:28,1:29:4.90:5,0,393	0/1:18,2:20:17.60:18,0,628	0/0:21,0:19:38.89:0,39,360	1/1:12,0:12:0.29:1,0,0	0/1:20,2:21:27.86:28,0,521	0/0:16,0:20:23.85:0,24,185	0/0:18,1:19:1.13:0,1,463	0/0:21,1:23:16.21:0,16,688	0/1:19,6:25:91.85:92,0,492	0/1:30,3:33:26.25:26,0,984	0/0:10,0:9:12.01:0,12,126	0/0:14,0:14:21.06:0,21,302	0/0:18,0:18:42.14:0,42,656	0/0:35,1:36:33.99:0,34,963	0/1:21,3:24:21.94:22,0,594	0/0:8,0:10:8.38:0,8,76	0/0:25,0:27:16.10:0,16,120	0/0:27,0:26:34.38:0,34,753	0/0:14,0:14:20.46:0,20,139	0/0:27,1:28:16.11:0,16,655	0/0:5,0:9:5.97:0,6,46
chr10	71069603	.	TA	T	232.22	PASS	AB=0.913;AC=5;AF=0.089;AN=56;BaseQRankSum=3.631;DP=627;FS=1.349;HRun=12;HaplotypeScore=89.4025;InbreedingCoeff=0.7260;MQ=61.53;MQ0=4;MQRankSum=-0.475;QD=5.28;ReadPosRankSum=-0.018;VQSLOD=2.2437;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:28:55.76:0,56,292	0/0:11,0:11:23.95:0,24,222	0/0:25,1:14:21.11:0,21,261	0/1:19,2:11:16.93:17,0,187	0/0:25,0:25:60.99:0,61,603	0/0:21,0:22:50.91:0,51,489	0/0:23,1:24:36.87:0,37,550	0/0:31,0:31:66.12:0,66,660	0/0:22,3:26:7.44:0,7,416	1/1:2,9:11:25.92:192,26,0	1/1:2,8:11:20.39:151,20,0	0/0:18,1:21:24.49:0,24,385	0/0:6,0:21:31.65:0,32,180	0/0:18,2:20:15.83:0,16,336	0/0:25,0:26:53.92:0,54,520	0/0:24,1:26:45.58:0,46,594	0/0:33,3:36:11.43:0,11,643	0/0:4,0:12:22.86:0,23,121	0/0:22,2:24:16.65:0,17,532	0/0:21,1:23:39.96:0,40,529	0/0:33,0:34:62.68:0,63,722	0/0:17,1:18:21.79:0,22,382	0/0:3,0:11:19.90:0,20,102	0/0:9,0:24:40.14:0,40,216	0/0:26,1:29:44.71:0,45,623	0/0:17,0:17:44.30:0,44,429	0/0:30,1:33:31.48:0,31,627	0/0:13,0:13:18.04:0,18,183
chr10	71070412	.	CT	C	4267.05	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.626;DP=610;FS=5.378;HRun=2;HaplotypeScore=59.7914;InbreedingCoeff=0.9996;MQ=80.24;MQ0=1;MQRankSum=-2.009;QD=36.47;ReadPosRankSum=0.559;VQSLOD=5.2810;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:93.30:1207,93,0	0/0:14,0:14:42.14:0,42,629	0/0:21,0:21:60.19:0,60,809	0/0:15,0:15:45.13:0,45,640	0/0:27,0:27:81.27:0,81,1211	0/0:23,0:23:66.22:0,66,985	0/0:27,0:27:81.26:0,81,1181	0/0:22,0:22:60.18:0,60,862	0/0:16,0:16:42.14:0,42,623	1/1:0,17:17:51.17:662,51,0	1/1:2,19:21:57.18:740,57,0	0/0:23,0:23:63.68:0,64,936	0/0:12,0:12:36.11:0,36,519	0/0:16,0:16:45.15:0,45,674	0/0:25,0:25:72.24:0,72,1077	0/0:25,0:25:72.24:0,72,1077	0/0:46,0:44:99:0,132,1909	1/1:1,10:11:30.10:389,30,0	0/0:24,0:23:66.20:0,66,965	0/0:25,0:25:75.25:0,75,1121	0/0:23,0:23:69.23:0,69,1031	0/0:13,0:13:39.13:0,39,583	0/0:24,0:24:72.24:0,72,1073	0/0:34,0:34:99:0,99,1475	0/0:27,0:27:81.26:0,81,1192	1/1:0,23:23:69.21:879,69,0	0/0:11,0:11:30.10:0,30,448	1/1:1,12:13:30.10:390,30,0
chr10	71070521	.	GA	G	149.65	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=0.342;DP=447;FS=1.338;HRun=8;HaplotypeScore=72.1019;InbreedingCoeff=0.8353;MQ=39.08;MQ0=60;MQRankSum=-1.147;QD=5.16;ReadPosRankSum=1.072;VQSLOD=0.1395;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:17:29.50:0,30,279	0/0:5,0:5:3.01:0,3,36	./.	./.	0/0:17,0:18:21.05:0,21,238	0/0:18,0:17:27.04:0,27,299	0/0:22,0:17:44.98:0,45,482	0/0:16,0:7:11.91:0,12,109	0/0:18,0:16:30.42:0,30,310	0/0:18,0:16:36.06:0,36,411	0/0:10,0:9:15.05:0,15,181	0/0:12,0:12:20.92:0,21,223	0/0:18,0:16:35.46:0,35,342	0/0:13,0:10:27.08:0,27,313	0/0:23,0:21:45.05:0,45,499	0/0:21,0:20:51.43:0,51,556	0/0:38,0:31:63.91:0,64,689	0/0:16,0:11:26.90:0,27,248	0/0:15,0:14:30.09:0,30,362	0/0:18,0:17:24.05:0,24,275	0/0:13,0:11:24.04:0,24,266	0/0:9,0:8:15.05:0,15,181	0/0:9,0:9:18.05:0,18,207	0/0:24,0:15:24.01:0,24,272	0/0:16,0:15:18.05:0,18,214	1/1:9,5:14:17.82:173,18,0	0/0:18,0:18:33.10:0,33,398	1/1:12,3:7:8.57:86,9,0
chr10	71071424	.	CA	C	2133.93	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.076;DP=565;FS=5.937;HRun=6;HaplotypeScore=60.9708;InbreedingCoeff=0.9909;MQ=64.26;MQ0=1;MQRankSum=-0.692;QD=27.71;ReadPosRankSum=1.631;VQSLOD=4.2760;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:84.27:0,84,1101	0/0:5,0:5:15.05:0,15,197	0/0:31,1:28:70.76:0,71,886	0/0:27,0:23:17.92:0,18,564	0/0:19,0:19:51.17:0,51,670	0/0:23,0:23:63.20:0,63,828	0/0:20,0:20:57.17:0,57,730	0/0:25,0:25:63.20:0,63,827	0/0:20,0:20:60.18:0,60,769	1/1:1,15:16:42.10:451,42,0	1/1:0,18:18:54.14:578,54,0	0/0:20,0:20:60.19:0,60,789	0/0:19,0:19:54.17:0,54,701	0/0:15,0:15:45.15:0,45,591	0/0:13,0:13:36.05:0,36,436	0/0:20,0:20:60.14:0,60,719	0/0:38,0:38:99:0,111,1440	0/0:28,0:27:78.25:0,78,1021	0/0:23,0:19:48.16:0,48,629	0/0:8,0:8:21.07:0,21,274	0/0:19,0:19:57.19:0,57,748	0/0:8,0:8:21.07:0,21,276	0/0:13,0:13:33.10:0,33,421	0/0:27,0:27:78.24:0,78,1012	0/0:18,0:18:48.14:0,48,595	1/1:3,20:23:60.10:621,60,0	0/0:14,0:14:39.13:0,39,510	1/1:0,20:20:60.15:645,60,0
chr10	71071615	.	AT	A	2466.74	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=11.866;DP=353;FS=1.533;HRun=5;HaplotypeScore=48.5649;InbreedingCoeff=0.7737;MQ=65.19;MQ0=5;MQRankSum=0.204;QD=22.63;ReadPosRankSum=1.551;VQSLOD=2.6132;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,5:20:47.77:414,48,0	0/0:4,0:4:11.96:0,12,125	0/0:12,1:8:1.11:0,1,92	0/0:10,0:4:8.53:0,9,51	0/0:15,0:15:39.10:0,39,487	0/0:20,0:20:60.19:0,60,806	0/0:6,0:6:14.99:0,15,167	0/0:30,0:28:81.16:0,81,977	0/0:6,0:6:18.04:0,18,229	1/1:0,11:11:32.96:343,33,0	1/1:1,12:13:36.04:391,36,0	0/0:10,0:10:21.05:0,21,257	0/0:10,0:10:26.53:0,27,119	0/0:6,0:6:18.06:0,18,246	0/0:5,0:5:12.04:0,12,164	0/0:12,0:12:30.10:0,30,407	0/0:29,0:29:81.14:0,81,1041	1/1:3,7:15:20.26:198,20,0	0/0:20,0:20:54.13:0,54,676	0/0:6,0:6:18.04:0,18,228	0/0:6,0:6:12.02:0,12,147	0/0:1,0:1:3.01:0,3,40	0/1:5,0:5:13.34:39,0,13	0/0:3,0:3:2.37:0,2,8	0/0:13,0:13:39.10:0,39,498	1/1:0,26:25:75.13:827,75,0	0/0:19,0:19:51.10:0,51,656	1/1:3,16:17:39.11:441,39,0
chr10	71071626	.	AAAC	A	563.82	PASS	AB=0.800;AC=3;AF=0.054;AN=56;BaseQRankSum=6.330;DP=357;FS=8.490;HRun=0;HaplotypeScore=71.7640;InbreedingCoeff=0.4815;MQ=69.21;MQ0=0;MQRankSum=-5.788;QD=16.11;ReadPosRankSum=0.057;VQSLOD=2.4511;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,17:23:14.39:448,14,0	0/0:4,0:4:12.04:0,12,256	0/0:17,0:12:22.39:0,22,219	0/0:7,0:5:10.69:0,11,68	0/0:11,0:11:33.09:0,33,629	0/0:21,0:21:63.22:0,63,1322	0/0:6,0:6:18.04:0,18,332	0/0:26,0:26:66.20:0,66,1317	0/0:6,0:6:18.06:0,18,355	0/0:14,0:14:37.15:0,37,495	0/0:16,0:16:48.16:0,48,783	0/0:6,0:6:18.04:0,18,331	0/0:15,0:15:45.09:0,45,777	0/0:7,0:7:21.07:0,21,430	0/0:5,0:5:15.05:0,15,320	0/0:10,0:10:30.10:0,30,641	0/0:32,0:32:87.25:0,87,1711	0/1:9,3:12:18.86:217,0,19	0/0:19,0:19:47.99:0,48,894	0/0:7,0:7:21.07:0,21,435	0/0:3,0:3:9.03:0,9,192	0/0:2,0:2:6:0,6,88	0/0:4,0:4:12.04:0,12,241	0/0:3,0:3:6.02:0,6,121	0/0:14,0:14:42.13:0,42,846	0/0:28,0:27:77.08:0,77,1134	0/0:22,0:22:63.15:0,63,1184	0/0:17,0:17:41.17:0,41,592
chr10	71072087	.	G	GGGCACACTAC	4788.76	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.187;DP=830;FS=1.375;HRun=0;HaplotypeScore=238.8349;InbreedingCoeff=0.9981;MQ=82.08;MQ0=0;MQRankSum=-9.067;QD=73.67;ReadPosRankSum=-0.082;VQSLOD=4.7115;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,27:49:69.23:3422,69,0	0/0:16,0:16:39.13:0,39,1212	0/0:22,0:22:53.81:0,54,1316	0/0:27,0:27:24.22:0,24,1161	0/0:35,0:34:93.29:0,93,2748	0/0:30,0:29:72.25:0,72,2188	0/0:32,0:32:81.28:0,81,2403	0/0:36,0:36:81.25:0,81,2151	0/0:29,0:29:72.25:0,72,2250	0/0:31,0:31:78.24:0,78,2170	0/0:16,0:16:42.11:0,42,1061	0/0:25,0:25:66.21:0,66,1963	0/0:27,0:27:72.25:0,72,2224	0/0:43,0:43:99:0,108,3183	0/0:37,0:36:96.29:0,96,2727	0/0:33,0:33:90.29:0,90,2677	0/0:23,0:23:63.22:0,63,1919	1/1:11,4:16:27.09:1367,27,0	0/0:32,0:32:69.24:0,69,2100	0/0:22,0:22:66.20:0,66,1839	0/0:58,0:58:99:0,141,4121	0/0:23,0:23:54.16:0,54,1521	0/0:25,0:25:60.18:0,60,1661	0/0:37,0:37:96.29:0,96,2777	0/0:26,0:26:66.23:0,66,1989	0/0:41,0:41:99:0,99,2981	0/0:29,0:29:72.23:0,72,2149	0/0:10,0:10:30.10:0,30,887
chr10	71072872	.	TGC	T	2036.06	PASS	AB=0.521;AC=3;AF=0.054;AN=56;BaseQRankSum=9.366;DP=718;FS=1.159;HRun=0;HaplotypeScore=91.6848;InbreedingCoeff=0.6472;MQ=84.57;MQ0=0;MQRankSum=-2.294;QD=39.16;ReadPosRankSum=1.506;VQSLOD=5.6139;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,2750	0/0:10,0:10:27.08:0,27,512	0/0:20,0:20:52.72:0,53,1055	0/0:26,0:26:50.76:0,51,1239	0/0:19,0:19:57.20:0,57,1145	0/0:28,0:28:84.27:0,84,1658	0/0:25,0:25:75.26:0,75,1508	0/0:17,0:17:51.16:0,51,960	0/0:26,0:26:78.27:0,78,1583	0/0:20,0:20:60.21:0,60,1219	0/0:14,0:14:42.14:0,42,838	0/0:33,0:33:99:0,99,2007	0/0:21,0:21:63.22:0,63,1280	0/0:28,0:28:84.29:0,84,1705	0/0:31,0:31:93.32:0,93,1862	0/0:22,0:22:66.23:0,66,1328	0/0:27,0:27:81.25:0,81,1587	0/0:21,0:21:63.22:0,63,1270	0/0:17,0:17:48.13:0,48,898	0/0:20,0:20:60.21:0,60,1217	0/0:51,0:51:99:0,151,2989	0/0:18,0:18:54.19:0,54,1086	0/0:19,0:19:57.20:0,57,1145	0/0:48,0:48:99:0,144,2826	0/0:31,0:31:93.30:0,93,1839	0/1:3,34:37:68.27:1506,0,68	0/0:27,0:27:81.28:0,81,1620	1/1:0,15:15:39.13:636,39,0
chr10	71074625	.	ACAG	A	2467.65	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.772;DP=679;FS=3.365;HRun=0;HaplotypeScore=95.9090;InbreedingCoeff=0.9921;MQ=83.35;MQ0=0;MQRankSum=-5.169;QD=41.13;ReadPosRankSum=0.992;VQSLOD=4.8884;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,45:46:99:2007,114,0	0/0:7,0:7:21.07:0,21,497	0/0:21,0:21:60.21:0,60,1392	0/0:21,0:21:52.09:0,52,1162	0/0:21,0:21:63.22:0,63,1443	0/0:20,0:20:57.18:0,57,1302	0/0:34,0:34:99:0,99,2306	0/0:28,0:28:78.23:0,78,1718	0/0:18,0:18:54.19:0,54,1277	0/0:36,0:35:99:0,102,2360	0/0:21,0:21:57.20:0,57,1320	0/0:22,0:22:66.23:0,66,1517	0/0:18,0:18:54.16:0,54,1215	0/0:28,0:28:84.29:0,84,1960	0/0:21,0:21:63.20:0,63,1419	0/0:40,0:40:99:0,120,2793	0/0:37,0:36:99:0,105,2460	1/1:1,13:14:33.11:582,33,0	0/0:32,0:32:90.31:0,90,2051	0/0:19,0:19:57.20:0,57,1348	0/0:54,0:54:99:0,160,3589	0/0:9,0:9:27.09:0,27,639	0/0:7,0:7:18.06:0,18,405	0/0:21,0:21:60.17:0,60,1314	0/0:23,0:23:69.22:0,69,1542	0/0:26,0:26:78.26:0,78,1736	0/0:27,0:26:81.28:0,81,1870	0/0:8,0:8:24.08:0,24,504
chr10	71074814	.	TTTA	T	404.59	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=6.428;DP=535;FS=1.388;HRun=0;HaplotypeScore=89.6609;InbreedingCoeff=0.5352;MQ=66.06;MQ0=11;MQRankSum=-2.510;QD=7.49;ReadPosRankSum=1.797;VQSLOD=2.8485;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:89.62:0,90,899	0/0:8,0:8:23.97:0,24,405	0/0:42,0:16:15.42:0,15,231	0/0:38,0:13:16.40:0,16,181	0/0:23,0:23:53.72:0,54,994	0/0:12,0:12:32.77:0,33,517	0/0:15,0:15:44.97:0,45,618	0/0:33,0:33:72.21:0,72,972	0/0:16,0:16:42.03:0,42,644	0/0:19,0:19:32.45:0,32,217	0/0:13,0:13:15.24:0,15,88	0/0:13,0:13:35.85:0,36,499	0/1:13,0:13:9.59:10,0,62	0/0:13,0:13:33.56:0,34,516	0/0:13,0:13:38.89:0,39,579	0/0:14,0:14:39.11:0,39,647	0/0:37,0:36:94.89:0,95,1416	0/0:19,0:19:35.89:0,36,398	0/0:20,0:20:58.32:0,58,832	0/0:29,0:28:69.01:0,69,1167	0/0:7,0:7:13.80:0,14,243	0/0:13,0:13:28.60:0,29,444	0/1:7,0:7:3.16:3,0,54	0/1:11,0:10:26.40:33,0,26	0/0:17,0:17:45.03:0,45,654	1/1:7,6:13:27.09:305,27,0	0/0:25,0:25:73.64:0,74,1060	1/1:7,3:7:15.04:188,15,0
chr10	71074815	.	TTA	T	255.46	PASS	AB=0.954;AC=7;AF=0.125;AN=56;BaseQRankSum=4.857;DP=521;FS=9.676;HRun=0;HaplotypeScore=79.3611;InbreedingCoeff=0.5547;MQ=66.71;MQ0=11;MQRankSum=-1.513;QD=2.41;ReadPosRankSum=-0.522;VQSLOD=0.9012;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:38:85.26:0,85,656	0/0:9,0:9:26.92:0,27,334	0/1:37,0:16:2.82:3,0,141	0/1:37,0:12:12.09:12,0,97	0/0:22,0:22:55.31:0,55,760	0/0:12,0:12:29.75:0,30,365	0/0:15,0:15:40.91:0,41,471	0/0:31,1:32:74.42:0,74,779	0/0:16,0:16:38.11:0,38,472	0/0:19,0:19:44.34:0,44,255	0/0:13,0:13:25.27:0,25,129	0/0:14,0:14:21.59:0,22,338	0/0:13,0:13:17.39:0,17,114	0/0:12,0:12:33.07:0,33,398	0/0:13,0:13:38.56:0,39,443	0/0:15,0:15:41.80:0,42,507	0/0:36,1:36:73.53:0,74,990	0/0:15,0:15:33.66:0,34,263	0/0:18,0:18:50.36:0,50,596	0/0:28,0:27:44.64:0,45,847	0/1:7,1:8:7.13:7,0,198	0/0:13,0:13:31.99:0,32,313	0/0:8,0:8:16.81:0,17,104	0/0:11,0:10:21.55:0,22,107	0/0:17,0:17:38.77:0,39,474	1/1:11,1:13:18.60:253,19,0	0/0:25,0:25:73.55:0,74,828	1/1:9,0:7:14.90:111,15,0
chr10	71075320	.	C	CG	873.60	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.528;DP=670;FS=0.000;HRun=5;HaplotypeScore=65.6397;InbreedingCoeff=0.9833;MQ=80.10;MQ0=0;MQRankSum=-0.166;QD=30.12;ReadPosRankSum=-0.521;VQSLOD=3.7834;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,123,1312	0/0:5,0:5:15.04:0,15,161	0/0:15,0:15:39.02:0,39,390	0/0:18,0:18:45.09:0,45,468	0/0:24,0:24:66.13:0,66,698	0/0:35,0:35:96.24:0,96,1031	0/0:29,0:29:81.20:0,81,871	0/0:16,0:16:39.09:0,39,411	0/0:22,0:22:60.15:0,60,645	0/0:20,0:20:45.09:0,45,471	0/0:14,0:14:36.08:0,36,378	0/0:28,0:28:75.19:0,75,806	0/0:23,0:23:66.17:0,66,709	0/0:31,0:31:84.21:0,84,902	0/0:24,0:24:72.18:0,72,774	0/0:21,0:21:63.16:0,63,677	0/0:36,0:36:96.22:0,96,1023	0/0:34,0:34:84.17:0,84,890	0/0:23,0:23:60.15:0,60,645	0/0:17,0:17:42.10:0,42,451	0/0:86,0:86:99:0,244,2600	0/0:14,0:14:39.10:0,39,419	0/0:16,0:16:36.08:0,36,387	0/0:14,0:14:39.06:0,39,407	0/0:14,0:14:39.10:0,39,419	1/1:1,22:23:63.16:795,63,0	0/0:14,0:14:42.09:0,42,443	1/1:0,6:6:15.05:197,15,0
chr10	71075573	.	TG	T	1555.29	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=6.367;DP=610;FS=33.432;HRun=1;HaplotypeScore=88.6512;InbreedingCoeff=0.8192;MQ=71.79;MQ0=1;MQRankSum=-4.598;QD=14.54;ReadPosRankSum=-4.232;VQSLOD=0.6899;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:35:23.19:23,0,320	0/0:12,0:12:35.73:0,36,325	0/0:37,0:21:21.16:0,21,279	0/0:23,0:15:18.39:0,18,182	0/0:36,0:36:95.84:0,96,870	0/0:21,0:21:21.29:0,21,440	0/0:25,0:25:63.69:0,64,567	0/0:31,0:31:22.78:0,23,553	0/0:27,0:27:43.68:0,44,522	1/1:13,10:22:66:612,66,0	1/1:0,13:13:23.10:178,23,0	0/0:15,0:15:44.19:0,44,407	0/0:22,0:22:7.19:0,7,352	0/0:10,0:10:11.63:0,12,197	0/0:24,1:25:26.87:0,27,457	0/0:13,0:13:23.48:0,23,308	0/0:24,1:25:8.05:0,8,378	0/0:17,0:17:25.91:0,26,164	0/0:25,0:25:42.72:0,43,501	0/0:29,0:29:50.96:0,51,637	0/0:14,0:14:22.98:0,23,241	0/0:13,0:13:35.88:0,36,351	0/0:18,0:18:44.31:0,44,454	0/0:16,0:16:34.84:0,35,417	0/0:17,0:17:40.74:0,41,400	1/1:13,12:25:72.02:673,72,0	0/0:32,0:31:43.24:0,43,725	1/1:3,6:9:24.04:233,24,0
chr10	71075574	.	GT	G	83.37	PASS	AB=0.936;AC=14;AF=0.250;AN=56;BaseQRankSum=7.249;DP=630;FS=1.582;HRun=15;HaplotypeScore=93.7670;InbreedingCoeff=0.3152;MQ=72.62;MQ0=1;MQRankSum=-3.962;QD=0.36;ReadPosRankSum=3.567;VQSLOD=-0.5341;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:35:67.51:0,68,345	0/0:13,0:14:17.10:0,17,169	0/0:41,0:22:40.80:0,41,271	0/1:23,0:16:0.89:1,0,65	0/0:31,1:35:25.11:0,25,436	0/0:20,1:22:18.41:0,18,280	0/1:21,3:29:10.82:11,0,300	0/0:29,1:31:16.80:0,17,348	0/0:21,1:27:27.26:0,27,363	1/1:24,0:23:10.96:43,11,0	0/1:13,0:13:5.01:23,0,5	0/0:15,0:15:11.26:0,11,219	0/1:19,2:21:9.35:9,0,261	0/0:8,0:10:23.17:0,23,173	0/1:23,2:27:4.62:5,0,274	0/0:11,1:12:13.72:0,14,239	0/1:21,3:25:24.35:24,0,247	0/0:5,0:19:19.92:0,20,103	0/0:25,1:27:36.72:0,37,437	0/0:23,4:28:33.52:0,34,401	0/1:12,0:13:0.84:1,0,126	0/0:13,0:13:26.96:0,27,227	0/0:18,0:19:41.44:0,41,371	0/0:16,0:17:31.72:0,32,290	0/1:14,1:17:14.47:14,0,234	1/1:25,0:25:11.34:68,11,0	0/0:31,0:32:51.72:0,52,543	1/1:11,0:11:11.60:40,12,0
chr10	71075586	.	TTTTC	T	1300.62	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.950;DP=649;FS=5.096;HRun=0;HaplotypeScore=123.1945;InbreedingCoeff=0.9506;MQ=71.64;MQ0=1;MQRankSum=-6.375;QD=16.89;ReadPosRankSum=1.159;VQSLOD=3.3048;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:84.69:0,85,1375	0/0:13,0:13:36.08:0,36,629	0/0:45,0:22:65.65:0,66,787	0/0:32,0:21:40.53:0,41,523	0/0:29,0:29:87.05:0,87,1596	0/0:23,0:23:69.06:0,69,1266	0/0:28,0:28:72.20:0,72,1423	0/0:34,0:34:90.12:0,90,1433	0/0:26,0:26:69.15:0,69,1375	1/1:16,7:22:28.35:515,28,0	1/1:8,5:13:12.26:174,12,0	0/0:17,0:17:51.03:0,51,904	0/0:23,0:23:69.14:0,69,1139	0/0:9,0:9:27:0,27,519	0/0:26,0:26:75.19:0,75,1344	0/0:16,0:16:48:0,48,928	0/0:22,0:22:66.13:0,66,1169	0/0:18,0:18:4.31:0,4,377	0/0:29,0:29:81.04:0,81,1602	0/0:27,0:27:75.17:0,75,1468	0/0:13,0:13:39.02:0,39,591	0/0:15,0:15:45.10:0,45,795	0/0:21,0:21:62.09:0,62,1261	0/0:19,0:19:56.10:0,56,1091	0/0:20,0:20:57.12:0,57,1045	1/1:16,11:27:21.43:543,21,0	0/0:35,0:33:99:0,99,1800	1/1:10,4:14:20.65:225,21,0
chr10	71075589	.	TC	T	1170.53	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.682;DP=610;FS=2.877;HRun=2;HaplotypeScore=83.7622;InbreedingCoeff=0.9697;MQ=71.47;MQ0=1;MQRankSum=-6.803;QD=18.01;ReadPosRankSum=1.009;VQSLOD=3.9148;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:37.54:0,38,488	0/0:12,0:12:31.21:0,31,288	0/0:40,0:21:41.64:0,42,406	0/0:32,0:21:21.38:0,21,295	0/0:24,0:24:63.74:0,64,618	0/0:18,0:18:50.05:0,50,518	0/0:25,0:25:63.84:0,64,638	0/0:35,0:35:79.97:0,80,760	0/0:24,0:24:63.88:0,64,643	1/1:20,0:19:50.87:426,51,0	1/1:10,0:10:22.98:187,23,0	0/0:15,0:15:12.74:0,13,397	0/0:22,0:22:40.69:0,41,419	0/0:10,0:10:20.27:0,20,215	0/0:23,0:23:59.36:0,59,558	0/0:16,0:16:47.31:0,47,472	0/0:22,0:22:54.62:0,55,514	0/0:15,0:15:7.94:0,8,135	0/0:30,0:30:71.32:0,71,833	0/0:28,0:28:68.11:0,68,706	0/0:14,0:14:35.30:0,35,312	0/0:15,0:15:42.07:0,42,445	0/0:22,0:22:59.97:0,60,635	0/0:19,0:19:56.95:0,57,593	0/0:19,0:19:40.51:0,41,456	1/1:20,2:22:53.70:443,54,0	0/0:34,0:33:86.75:0,87,893	1/1:11,2:13:35.71:274,36,0
chr10	71076125	.	AG	A	1103.03	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.462;DP=717;FS=5.024;HRun=6;HaplotypeScore=78.2544;InbreedingCoeff=0.9993;MQ=85.26;MQ0=0;MQRankSum=-0.074;QD=25.07;ReadPosRankSum=1.961;VQSLOD=3.9072;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.25:0,84,1077	0/0:11,0:11:33.09:0,33,419	0/0:19,0:19:51.16:0,51,649	0/0:28,0:28:65.36:0,65,781	0/0:28,0:28:78.24:0,78,1011	0/0:13,0:13:36.12:0,36,474	0/0:28,0:28:75.24:0,75,985	0/0:28,0:28:69.22:0,69,901	0/0:19,0:19:54.17:0,54,696	0/0:30,0:30:78.25:0,78,1026	0/0:22,0:22:57.15:0,57,707	0/0:34,0:34:96.28:0,96,1231	0/0:25,0:25:75.24:0,75,979	0/0:32,0:32:93.28:0,93,1194	0/0:33,0:33:90.29:0,90,1181	0/0:27,0:27:75.19:0,75,927	0/0:32,0:32:90.27:0,90,1168	0/0:16,0:16:48.14:0,48,616	0/0:24,0:24:63.18:0,63,798	0/0:23,0:23:66.20:0,66,853	0/0:48,0:48:99:0,141,1834	0/0:24,0:24:72.19:0,72,900	0/0:22,0:22:57.17:0,57,732	0/0:31,0:31:87.28:0,87,1140	0/0:25,0:25:66.19:0,66,831	1/1:6,28:34:87.22:934,87,0	0/0:20,0:20:54.18:0,54,710	1/1:0,10:10:27.07:290,27,0
chr10	71076770	.	C	CT	1706.90	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-0.147;DP=438;FS=6.944;HRun=0;HaplotypeScore=68.1246;InbreedingCoeff=0.9117;MQ=79.72;MQ0=1;MQRankSum=0.220;QD=18.76;ReadPosRankSum=5.657;VQSLOD=5.1499;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:20.49:0,20,161	0/0:3,0:3:3:0,3,26	0/0:36,0:26:64.99:0,65,694	0/0:19,0:14:31.16:0,31,234	0/0:14,0:14:26.97:0,27,310	0/0:16,0:16:34.13:0,34,370	0/0:12,0:12:26.44:0,26,260	0/0:18,0:18:35.93:0,36,329	0/0:15,0:15:36.01:0,36,389	1/1:2,17:20:31.67:504,32,0	1/1:4,8:13:21.41:274,21,0	0/0:10,0:10:26.93:0,27,274	1/1:0,11:12:18.06:238,18,0	0/0:22,0:22:40.18:0,40,462	0/0:25,0:25:53.98:0,54,590	0/0:15,0:15:38.99:0,39,443	0/0:22,0:22:51:0,51,574	0/0:23,0:23:14.80:0,15,103	0/0:4,0:4:8.90:0,9,62	0/0:8,0:8:14.17:0,14,102	0/0:24,0:24:57.01:0,57,571	0/0:11,0:11:26.89:0,27,250	1/1:1,11:13:15.01:255,15,0	1/1:0,13:14:33.04:414,33,0	0/0:14,0:14:26.77:0,27,285	1/1:1,8:12:20.88:193,21,0	0/0:19,0:19:53.97:0,54,587	1/1:0,0:7:2.94:18,3,0
chr10	71076920	.	A	AGAATGAAT	3113.38	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.321;DP=685;FS=4.781;HRun=0;HaplotypeScore=169.8298;InbreedingCoeff=0.9098;MQ=75.26;MQ0=1;MQRankSum=-6.421;QD=79.83;ReadPosRankSum=-0.621;VQSLOD=3.6878;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:72.22:0,72,1701	0/0:20,0:20:51.14:0,51,1205	0/0:26,0:26:9.36:0,9,560	0/0:12,0:12:9.03:0,9,113	0/0:29,0:29:63.19:0,63,1495	0/0:24,0:24:51.18:0,51,1239	0/0:11,0:11:18.06:0,18,462	0/0:41,0:41:75.19:0,75,1482	0/0:23,0:23:57.18:0,57,1331	0/0:35,0:35:81.27:0,81,2033	0/0:22,0:22:45.15:0,45,1083	0/0:31,0:31:63.22:0,63,1565	0/0:14,0:14:33.11:0,33,819	0/0:25,0:25:60.21:0,60,1464	0/0:34,0:34:75.26:0,75,1892	0/0:30,0:30:60.19:0,60,1419	0/0:28,0:28:63.15:0,63,1392	0/0:18,0:18:28.14:0,28,714	0/0:26,0:25:45.13:0,45,978	0/0:40,0:40:99:0,102,2569	0/0:16,0:16:33.10:0,33,798	0/0:20,0:20:51.18:0,51,1290	0/0:19,0:19:45.11:0,45,929	0/0:24,0:24:60.19:0,60,1409	0/0:21,0:22:48.16:0,48,1210	1/1:6,22:30:72.21:2853,72,0	0/0:25,0:25:63.22:0,63,1619	1/1:4,3:9:9.03:374,9,0
chr10	71077738	.	T	TA	1680.96	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.194;DP=590;FS=2.862;HRun=1;HaplotypeScore=53.1392;InbreedingCoeff=0.9687;MQ=76.08;MQ0=0;MQRankSum=-1.027;QD=40.02;ReadPosRankSum=-0.233;VQSLOD=3.9691;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.20:0,60,779	0/0:3,0:3:9.03:0,9,117	0/0:15,0:15:45.11:0,45,555	0/0:7,0:7:21.03:0,21,252	0/0:25,0:25:75.21:0,75,945	0/0:28,0:28:84.23:0,84,1046	0/0:20,0:20:57.19:0,57,740	0/0:34,0:34:96.30:0,96,1223	0/0:35,0:35:99:0,102,1309	0/0:22,0:22:66.21:0,66,852	0/0:18,0:18:51.15:0,51,648	0/0:20,0:20:57.19:0,57,740	0/0:18,0:18:45.15:0,45,584	0/0:16,0:16:45.15:0,45,584	0/0:26,0:26:78.25:0,78,1012	0/0:29,0:29:87.28:0,87,1126	0/0:23,0:23:69.22:0,69,895	0/0:14,0:14:39.02:0,39,480	0/0:24,0:24:69.22:0,69,896	0/0:26,0:26:78.25:0,78,1000	0/0:24,0:24:72.23:0,72,924	0/0:15,0:15:45.15:0,45,584	0/0:20,0:20:60.20:0,60,779	0/0:21,0:20:51.17:0,51,662	0/0:22,0:22:63.20:0,63,817	1/1:0,28:28:84.26:1218,84,0	0/0:20,0:20:60.19:0,60,777	1/1:0,14:14:39.13:584,39,0
chr10	71077808	.	T	TA	2209.02	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-2.307;DP=554;FS=0.000;HRun=10;HaplotypeScore=65.8298;InbreedingCoeff=0.9427;MQ=74.94;MQ0=0;MQRankSum=-0.908;QD=17.39;ReadPosRankSum=0.310;VQSLOD=4.0637;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:41.47:424,41,0	0/0:6,0:6:17.96:0,18,144	0/0:13,0:11:17.90:0,18,145	0/0:14,0:14:5.96:0,6,48	0/0:20,0:20:50.93:0,51,418	0/0:28,0:28:65.89:0,66,542	0/0:19,0:19:41.90:0,42,340	0/0:49,0:49:77.80:0,78,636	0/0:25,0:25:56.88:0,57,468	1/1:11,13:24:32.40:511,32,0	1/1:5,8:13:26.96:258,27,0	0/0:21,0:22:52.96:0,53,424	1/1:1,14:16:26.90:270,27,0	0/0:12,0:12:23.95:0,24,197	0/0:23,0:23:53.89:0,54,440	0/0:24,0:25:45.24:0,45,475	0/0:26,0:26:68.92:0,69,566	1/1:1,14:15:8.45:295,8,0	0/0:23,0:24:52.91:0,53,420	0/0:24,0:24:53.66:0,54,417	0/0:11,0:11:29.87:0,30,238	0/0:12,0:12:26.88:0,27,214	1/1:3,11:15:5.43:257,5,0	1/1:2,19:21:36.09:384,36,0	0/0:11,0:11:26.94:0,27,222	0/0:22,0:22:27.02:0,27,305	0/0:22,0:22:50.61:0,51,399	0/0:16,0:16:44.95:0,45,369
chr10	71077827	.	GA	G	606.98	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=6.006;DP=525;FS=11.276;HRun=10;HaplotypeScore=61.5434;InbreedingCoeff=0.7667;MQ=65.29;MQ0=0;MQRankSum=-4.223;QD=12.91;ReadPosRankSum=-1.191;VQSLOD=1.8869;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:48.07:0,48,508	0/0:9,0:10:26.91:0,27,280	0/1:10,0:7:11.13:11,0,87	0/0:11,0:9:15.92:0,16,164	0/0:17,0:18:47.93:0,48,489	0/0:29,0:29:55.76:0,56,808	0/0:19,0:19:45.06:0,45,463	0/0:39,0:39:84.21:0,84,913	0/0:25,0:25:69.17:0,69,752	1/1:8,17:25:53.96:463,54,0	1/1:0,12:12:29.99:260,30,0	0/0:21,0:21:51.13:0,51,556	0/0:16,0:16:33.06:0,33,354	0/0:9,0:9:24.06:0,24,265	0/0:19,1:20:19.07:0,19,439	0/0:16,1:17:22.07:0,22,472	0/0:25,1:26:43.13:0,43,701	0/0:13,0:13:24.06:0,24,265	0/0:25,0:26:63.01:0,63,655	0/0:22,0:24:59.99:0,60,644	0/0:14,0:14:36.08:0,36,389	0/0:17,0:17:39.06:0,39,399	0/0:15,0:15:41.47:0,41,430	0/0:20,0:20:45.12:0,45,498	0/0:12,0:12:30.07:0,30,319	0/0:21,0:21:47.49:0,47,505	0/0:19,0:19:54.15:0,54,597	0/0:15,1:16:9.96:0,10,312
chr10	71078987	.	G	GA	377.50	PASS	AB=0.878;AC=7;AF=0.125;AN=56;BaseQRankSum=1.323;DP=447;FS=0.865;HRun=10;HaplotypeScore=62.6425;InbreedingCoeff=0.4215;MQ=58.22;MQ0=6;MQRankSum=0.947;QD=5.32;ReadPosRankSum=-1.400;VQSLOD=0.6166;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:75.93:0,76,599	0/0:14,0:14:35.87:0,36,288	0/0:19,0:11:13.31:0,13,99	0/0:15,0:8:14.27:0,14,104	0/0:25,0:25:30.40:0,30,247	0/0:7,0:7:11.98:0,12,99	0/0:19,0:19:38.88:0,39,317	0/0:22,0:22:38.91:0,39,318	0/0:10,0:10:20:0,20,154	1/1:3,13:14:30.08:320,30,0	1/1:5,6:11:17.83:160,18,0	0/0:9,0:9:20.97:0,21,172	0/1:8,3:12:8.99:9,0,128	0/0:9,0:10:13.89:0,14,95	0/0:12,0:12:29.95:0,30,246	0/0:5,0:5:14.98:0,15,123	0/0:28,0:28:74.86:0,75,609	0/0:28,0:28:53.90:0,54,443	0/0:17,0:14:32.93:0,33,267	0/0:26,0:26:30.78:0,31,420	0/0:12,0:12:23.19:0,23,180	0/0:3,0:3:5.99:0,6,49	0/0:16,0:15:32.92:0,33,270	0/0:19,0:21:52.98:0,53,425	0/0:12,1:14:0:0,0,195	0/1:13,1:12:5.02:5,0,170	0/1:16,2:18:18.13:18,0,276	0/0:3,0:3:2.99:0,3,25
chr10	71079146	.	GA	G	137.44	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=2.737;DP=509;FS=1.011;HRun=10;HaplotypeScore=80.2778;InbreedingCoeff=0.4472;MQ=46.26;MQ0=26;MQRankSum=-3.430;QD=5.09;ReadPosRankSum=0.374;VQSLOD=1.2087;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,2:38:61.28:0,61,804	0/0:9,1:11:0.94:0,1,216	./.	./.	0/0:32,0:31:38.92:0,39,395	0/0:19,0:17:20.42:0,20,207	0/0:35,1:32:49.13:0,49,747	0/0:29,0:29:71.02:0,71,775	0/0:13,0:12:30.07:0,30,323	0/0:22,0:21:23.57:0,24,248	0/0:16,0:16:9.49:0,9,98	0/0:13,0:13:36.10:0,36,398	0/0:13,1:13:22.20:0,22,209	0/0:11,0:10:24.06:0,24,258	0/0:15,0:15:36.05:0,36,375	0/0:11,1:11:7.69:0,8,306	0/0:28,0:28:66.15:0,66,728	0/0:17,0:13:14.71:0,15,238	0/0:15,0:10:24.02:0,24,244	0/0:20,0:20:51.11:0,51,541	0/0:14,0:12:30.02:0,30,302	0/0:13,0:13:36.10:0,36,397	0/0:19,0:17:26.90:0,27,238	0/0:20,0:18:27.03:0,27,280	0/0:18,0:18:45.05:0,45,464	1/1:27,0:21:1.90:213,2,0	0/0:26,0:25:63.15:0,63,674	0/0:7,0:5:4.07:0,4,13
chr10	71079153	.	AAAAGAAAGAAAGAAAG	A	1344.07	PASS	AB=1.000;AC=5;AF=0.096;AN=52;BaseQRankSum=5.733;DP=534;FS=0.808;HRun=0;HaplotypeScore=226.7682;InbreedingCoeff=0.7342;MQ=47.67;MQ0=29;MQRankSum=1.755;QD=23.58;ReadPosRankSum=-1.467;VQSLOD=2.1968;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:41:18.21:0,18,2533	0/0:11,0:11:18.06:0,18,1192	./.	./.	0/0:12,0:30:48.16:0,48,1427	0/0:15,0:14:30.10:0,30,1210	0/0:32,0:29:69.15:0,69,2630	0/0:38,0:33:39.13:0,39,901	0/0:13,0:12:24.08:0,24,1418	1/1:7,19:25:51.14:1233,51,0	1/1:5,11:16:13.58:191,14,0	0/0:16,0:16:36.59:0,37,1872	0/0:13,0:13:24.08:0,24,922	0/0:12,0:11:24.04:0,24,1147	0/0:17,0:17:30.10:0,30,1836	0/0:12,0:11:30.10:0,30,1953	0/0:29,0:29:60.19:0,60,3308	0/1:15,0:12:12.31:44,0,12	0/0:15,0:10:23.29:0,23,1268	0/0:23,0:23:51.12:0,51,2695	0/0:14,0:12:23.98:0,24,1088	0/0:13,0:13:33:0,33,1791	0/0:10,0:21:21.96:0,22,1057	0/0:13,0:18:18.04:0,18,457	0/0:22,0:22:50.09:0,50,2728	0/0:5,0:25:54.19:0,54,2583	0/0:27,0:26:57.18:0,57,2570	0/0:2,0:2:6.02:0,6,415
chr10	71079525	.	TA	T	5045.29	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.700;DP=740;FS=0.722;HRun=2;HaplotypeScore=85.1375;InbreedingCoeff=0.9994;MQ=59.31;MQ0=0;MQRankSum=-1.365;QD=32.76;ReadPosRankSum=4.194;VQSLOD=4.7590;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:81.04:0,81,1208	0/0:9,0:9:24.08:0,24,360	0/0:28,1:23:65:0,65,927	0/0:27,0:26:78.20:0,78,1091	0/0:30,0:30:87.27:0,87,1258	0/0:16,0:16:45.15:0,45,672	0/0:27,1:28:42.38:0,42,1102	0/0:36,1:37:69.44:0,69,1498	0/0:29,0:29:81.27:0,81,1196	1/1:0,17:17:48.16:621,48,0	1/1:2,10:12:27.08:339,27,0	0/0:38,0:38:99:0,111,1657	1/1:0,31:30:75.08:972,75,0	0/0:36,0:36:99:0,102,1509	0/0:42,0:42:99:0,123,1824	0/0:35,0:35:99:0,105,1573	0/0:30,0:30:87.25:0,87,1269	0/0:35,0:35:99:0,99,1460	0/0:22,0:21:60.20:0,60,898	0/0:19,0:19:57.19:0,57,854	0/0:26,0:25:78.24:0,78,1125	0/0:16,0:16:39.13:0,39,585	1/1:1,19:19:35.98:467,36,0	1/1:0,32:32:81.26:1052,81,0	0/0:16,0:16:39.13:0,39,585	1/1:0,22:22:66.21:854,66,0	0/0:32,0:32:96.32:0,96,1421	1/1:0,20:20:57.19:740,57,0
chr10	71080098	.	TAAAA	T	282.70	PASS	AC=4;AF=0.087;AN=46;BaseQRankSum=3.000;DP=211;FS=0.000;HRun=9;HaplotypeScore=43.4609;InbreedingCoeff=0.5523;MQ=69.64;MQ0=2;MQRankSum=-1.381;QD=18.85;ReadPosRankSum=1.388;VQSLOD=-0.4011;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:33.11:0,33,490	0/0:2,0:2:3.01:0,3,62	0/0:6,0:6:5.69:0,6,70	0/0:18,0:10:14.97:0,15,154	0/0:7,0:7:9.03:0,9,190	0/0:2,0:2:3.01:0,3,78	./.	0/0:35,0:35:81.74:0,82,1734	0/0:2,0:2:6.01:0,6,58	1/1:1,6:7:18.02:241,18,0	./.	0/0:3,0:3:9.03:0,9,213	1/1:8,0:8:17.97:155,18,0	0/0:2,0:2:6.02:0,6,110	0/0:4,0:4:6.01:0,6,103	0/0:3,0:3:9.03:0,9,161	0/0:32,0:32:78.21:0,78,1746	0/0:17,0:16:19.26:0,19,184	0/0:13,0:12:27.09:0,27,526	0/0:6,0:6:12.03:0,12,167	0/0:2,0:2:6.02:0,6,144	./.	./.	./.	0/0:5,0:5:15.05:0,15,344	0/0:3,0:3:6.02:0,6,100	0/0:8,0:7:15.05:0,15,389	0/0:4,0:4:12.01:0,12,145
chr10	71080100	.	AAAAAAAATATATAT	A	642.61	PASS	AB=1.000;AC=3;AF=0.063;AN=48;BaseQRankSum=3.201;DP=199;FS=6.006;HRun=0;HaplotypeScore=81.0043;InbreedingCoeff=0.3193;MQ=72.16;MQ0=2;MQRankSum=-2.138;QD=42.84;ReadPosRankSum=1.685;VQSLOD=2.5381;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:33.11:0,33,1491	0/0:2,0:2:3.01:0,3,193	0/0:4,0:4:8.36:0,8,134	0/0:21,0:13:19.31:0,19,280	0/0:5,0:5:15.03:0,15,487	0/0:2,0:2:6.02:0,6,315	0/0:1,0:1:2.99:0,3,23	0/0:33,0:33:94.17:0,94,4189	0/0:2,0:2:6.02:0,6,180	0/1:7,0:7:6.27:6,0,151	./.	0/0:3,0:3:9.03:0,9,464	1/1:0,8:8:18.06:730,18,0	0/0:2,0:2:6.02:0,6,307	0/0:2,0:2:6.02:0,6,265	0/0:4,0:4:12.04:0,12,441	0/0:31,0:31:84.22:0,84,3901	0/0:17,0:16:42.13:0,42,1391	0/0:12,0:11:30.10:0,30,1011	0/0:6,0:6:15.04:0,15,301	0/0:2,0:2:6.02:0,6,336	./.	./.	./.	0/0:5,0:5:15.05:0,15,725	0/0:3,0:3:9.01:0,9,261	0/0:6,0:5:18.04:0,18,911	0/0:4,0:4:12.04:0,12,495
chr10	71080106	.	AAT	A	595.19	PASS	AB=0.969;AC=15;AF=0.375;AN=40;BaseQRankSum=4.148;DP=174;FS=0.000;HRun=0;HaplotypeScore=37.2191;InbreedingCoeff=0.3702;MQ=76.74;MQ0=2;MQRankSum=-0.309;QD=5.51;ReadPosRankSum=2.409;VQSLOD=1.5464;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,9:13:24.07:281,24,0	0/0:0,0:1:3:0,3,26	./.	0/0:19,0:11:1.31:0,1,14	0/1:4,0:4:17.08:17,0,62	0/0:2,0:2:6.01:0,6,72	./.	0/1:26,3:29:16.23:16,0,593	./.	0/0:6,0:6:2.04:0,2,6	./.	0/0:3,0:3:6.02:0,6,93	1/1:8,0:8:16.42:76,16,0	1/1:1,1:2:3.01:35,3,0	0/0:1,0:1:3.01:0,3,47	0/0:4,0:4:3.01:0,3,40	0/1:28,0:28:6.27:6,0,305	1/1:4,0:17:28.41:140,28,0	0/0:9,0:8:3.01:0,3,47	./.	0/0:3,0:3:9.01:0,9,112	./.	./.	./.	0/0:5,0:5:9.03:0,9,140	1/1:1,2:3:6:59,6,0	0/0:5,0:4:15.05:0,15,233	1/1:0,3:3:9.03:105,9,0
chr10	71080688	.	GA	G	1990.66	PASS	AB=0.656;AC=16;AF=0.286;AN=56;BaseQRankSum=5.800;DP=653;FS=1.235;HRun=14;HaplotypeScore=77.1062;InbreedingCoeff=0.5867;MQ=68.33;MQ0=6;MQRankSum=0.840;QD=9.62;ReadPosRankSum=4.961;VQSLOD=3.2786;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,17:23:35.67:247,36,0	0/0:10,0:10:15.02:0,15,139	0/0:46,0:20:9.55:0,10,143	0/0:26,0:9:8.95:0,9,68	0/0:26,0:26:53.99:0,54,479	0/0:15,0:17:34.40:0,34,328	0/0:17,1:18:18.45:0,18,310	0/0:33,0:34:59.52:0,60,548	0/0:17,0:17:45.04:0,45,414	1/1:4,21:26:58.38:391,58,0	0/1:7,12:21:19.53:106,0,20	0/0:26,1:28:57.16:0,57,620	1/1:5,21:27:12.78:292,13,0	0/0:15,0:18:23.74:0,24,224	0/0:27,0:28:66.01:0,66,596	0/0:27,0:27:41.82:0,42,479	0/0:17,0:21:30:0,30,380	1/1:3,9:12:23.78:164,24,0	0/0:29,2:31:39.10:0,39,461	0/0:29,1:30:33.06:0,33,535	0/1:9,3:12:35.34:35,0,121	0/0:14,0:17:29.66:0,30,243	0/1:7,18:25:26.70:255,0,27	1/1:3,20:23:1.15:294,1,0	0/0:17,0:17:29.99:0,30,264	1/1:11,18:29:47.45:327,47,0	0/0:32,2:33:53.95:0,54,632	0/1:4,5:9:13.04:67,0,13
chr10	71080895	.	A	AC	2201.81	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.913;DP=606;FS=1.814;HRun=0;HaplotypeScore=69.9838;InbreedingCoeff=0.9552;MQ=62.86;MQ0=11;MQRankSum=3.878;QD=14.30;ReadPosRankSum=8.520;VQSLOD=4.3739;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,22:29:30.72:416,31,0	0/0:3,0:3:8.96:0,9,72	0/0:41,0:12:23.04:0,23,191	0/0:21,0:10:8.48:0,8,63	0/0:28,0:27:64.85:0,65,518	0/0:18,0:17:46.48:0,46,348	0/0:30,0:30:82.98:0,83,676	0/0:27,0:26:66.32:0,66,566	0/0:19,0:19:50.37:0,50,408	1/1:1,24:25:67.79:583,68,0	1/1:1,18:19:26.23:287,26,0	0/0:25,0:24:65.23:0,65,531	1/1:4,16:20:9.92:117,10,0	0/0:17,0:17:43.34:0,43,341	0/0:18,0:18:50.74:0,51,406	0/0:26,0:26:77.92:0,78,689	0/0:25,0:25:67.70:0,68,565	1/1:2,13:16:21.12:239,21,0	0/0:23,0:22:61.19:0,61,529	0/0:28,0:27:79.90:0,80,660	0/0:10,0:10:26.40:0,26,206	0/0:9,0:9:26.86:0,27,209	1/1:7,12:19:27.71:197,28,0	1/1:12,14:25:68.67:559,69,0	0/0:20,0:20:54.37:0,54,462	0/0:29,1:30:8.61:0,9,439	0/0:18,0:17:45.32:0,45,401	0/0:16,0:16:23.82:0,24,172
chr10	71080902	.	A	AC	2691.83	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.860;DP=607;FS=5.442;HRun=0;HaplotypeScore=69.0198;InbreedingCoeff=0.9702;MQ=62.28;MQ0=11;MQRankSum=3.308;QD=17.59;ReadPosRankSum=8.122;VQSLOD=5.3288;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:28,1:29:57.07:506,57,0	0/0:4,0:4:7.19:0,7,49	0/0:34,0:9:12.90:0,13,135	0/0:19,0:11:11.08:0,11,103	0/0:29,0:28:65.05:0,65,491	0/0:18,0:17:38.37:0,38,266	0/0:28,0:28:72.53:0,73,556	0/0:27,0:26:65.37:0,65,478	0/0:20,0:20:50.11:0,50,395	1/1:28,0:28:77.12:670,77,0	1/1:15,0:15:38.47:310,38,0	0/0:26,0:25:63.68:0,64,509	1/1:18,0:18:20.09:164,20,0	0/0:18,0:18:44.84:0,45,333	0/0:19,0:19:50.60:0,51,368	0/0:30,0:30:88.02:0,88,739	0/0:25,0:25:49.21:0,49,498	1/1:16,0:16:19.31:276,19,0	0/0:25,0:24:60.93:0,61,484	0/0:31,0:30:82.42:0,82,642	0/0:10,0:10:26:0,26,188	0/0:9,0:9:21.66:0,22,154	1/1:16,4:20:46.84:370,47,0	1/1:27,0:26:73.32:593,73,0	0/0:21,0:21:58.92:0,59,484	0/0:25,0:25:33.35:0,33,368	0/0:20,0:19:56.37:0,56,468	0/0:16,0:16:23.58:0,24,155
chr10	71081097	.	G	GAAAAACA	744.26	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.450;DP=487;FS=0.000;HRun=0;HaplotypeScore=110.3421;InbreedingCoeff=0.6817;MQ=71.36;MQ0=1;MQRankSum=-5.002;QD=31.01;ReadPosRankSum=-1.041;VQSLOD=3.2229;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:48.16:0,48,1067	0/0:7,0:7:9.03:0,9,201	0/0:18,0:16:6.02:0,6,132	0/0:15,0:14:1.03:0,1,10	0/0:11,0:11:9.03:0,9,201	0/0:21,0:20:33.11:0,33,736	0/0:13,0:13:15.03:0,15,289	0/0:28,0:28:23.76:0,24,516	0/0:20,0:20:27.09:0,27,565	0/0:17,0:17:12.04:0,12,266	0/0:18,0:18:39.13:0,39,850	0/0:17,0:17:33.11:0,33,736	0/0:19,0:19:36.12:0,36,761	0/0:19,0:18:30.10:0,30,634	0/0:26,0:26:33.11:0,33,736	0/0:25,0:25:33.11:0,33,718	0/0:32,0:32:58.40:0,58,1247	0/0:26,0:26:51.18:0,51,1109	0/0:18,0:18:21.07:0,21,467	0/0:14,0:14:21.07:0,21,466	0/0:7,0:7:12.03:0,12,211	0/0:12,0:12:15.05:0,15,330	0/0:14,0:14:15.05:0,15,334	0/0:13,0:13:24.08:0,24,511	0/0:9,0:9:6.02:0,6,134	1/1:17,5:22:18.06:652,18,0	0/0:16,0:15:30.10:0,30,626	1/1:2,0:2:6.02:200,6,0
chr10	71081364	.	T	TAG	566.92	PASS	AB=0.522;AC=3;AF=0.056;AN=54;BaseQRankSum=-0.204;DP=198;FS=2.216;HRun=0;HaplotypeScore=38.5743;InbreedingCoeff=0.3444;MQ=86.05;MQ0=3;MQRankSum=-3.215;QD=35.43;ReadPosRankSum=0.638;VQSLOD=5.1241;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:15.01:0,15,166	0/0:2,0:2:6.02:0,6,80	0/0:12,0:10:15.04:0,15,188	0/0:23,0:16:33.08:0,33,404	0/0:6,0:6:18.06:0,18,239	0/0:10,0:10:30.10:0,30,399	0/0:7,0:7:21.07:0,21,279	0/0:25,0:25:69.21:0,69,891	./.	0/0:4,0:4:12.04:0,12,160	0/0:6,0:6:3.01:0,3,40	0/0:3,0:3:9.03:0,9,120	0/0:5,0:5:12.04:0,12,160	0/0:4,0:4:12.02:0,12,144	0/0:7,0:7:21.06:0,21,264	0/0:2,0:2:3.01:0,3,40	0/0:6,0:6:18.06:0,18,239	0/0:5,0:5:15.05:0,15,200	0/0:7,0:6:15.05:0,15,190	0/0:5,0:5:15.01:0,15,154	0/0:14,0:14:42.12:0,42,543	0/0:2,0:2:6.02:0,6,80	0/0:3,0:3:3.01:0,3,40	0/0:7,0:8:3.01:0,3,40	0/0:7,0:7:18.06:0,18,240	0/1:1,10:12:3.57:507,0,4	0/0:1,0:1:3.01:0,3,40	1/1:0,4:4:9.03:156,9,0
chr10	71081507	.	CAT	C	2286.03	PASS	AB=0.918;AC=21;AF=0.375;AN=56;BaseQRankSum=9.573;DP=304;FS=0.000;HRun=0;HaplotypeScore=40.8410;InbreedingCoeff=0.4123;MQ=67.94;MQ0=1;MQRankSum=1.210;QD=12.92;ReadPosRankSum=3.684;VQSLOD=2.9320;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:21:432,21,0	0/0:1,0:1:3.01:0,3,50	0/0:6,0:4:6:0,6,55	0/1:21,0:14:6.19:6,0,61	0/0:9,0:9:21.07:0,21,346	0/1:9,1:10:10.40:10,0,369	0/1:5,0:6:2.12:2,0,137	0/0:28,0:28:56.53:0,57,823	0/0:2,0:2:6:0,6,73	1/1:4,17:21:54.17:665,54,0	1/1:4,5:9:12.04:150,12,0	0/0:3,0:3:6.02:0,6,99	1/1:0,8:8:21.07:262,21,0	0/0:6,0:6:15.05:0,15,248	0/1:9,1:10:10.40:10,0,369	0/0:5,0:5:12.04:0,12,189	0/1:16,3:19:70.35:70,0,502	1/1:5,14:19:16.13:427,16,0	0/0:15,0:15:42.13:0,42,666	0/1:7,1:8:16.42:16,0,276	0/0:15,0:15:27.09:0,27,440	0/0:2,0:2:3.01:0,3,50	1/1:1,4:5:9.03:112,9,0	1/1:6,8:14:24.08:300,24,0	0/0:7,0:7:15.04:0,15,223	0/0:14,0:14:33.10:0,33,522	0/1:11,0:11:10.23:10,0,319	0/0:14,0:14:30.04:0,30,438
chr10	71082194	.	ATTT	A	2200.41	PASS	AB=0.725;AC=13;AF=0.232;AN=56;BaseQRankSum=8.267;DP=604;FS=0.967;HRun=16;HaplotypeScore=95.6772;InbreedingCoeff=0.7088;MQ=64.64;MQ0=7;MQRankSum=-0.040;QD=12.02;ReadPosRankSum=7.149;VQSLOD=0.9290;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,38:44:93.05:1001,93,0	0/0:6,0:6:15.05:0,15,255	0/0:34,0:13:15.45:0,15,145	0/1:22,0:11:3.22:3,0,81	0/0:14,1:19:5:0,5,448	0/0:17,0:21:57.16:0,57,901	0/0:25,0:26:64.01:0,64,999	0/0:32,0:35:54.16:0,54,913	0/0:16,0:16:27.09:0,27,451	0/1:8,1:20:9.09:9,0,85	0/1:4,4:22:22.01:107,0,22	0/0:17,0:20:57.15:0,57,889	1/1:4,6:11:20.86:211,21,0	0/0:17,0:18:42.12:0,42,699	0/0:16,0:21:36.06:0,36,522	0/0:13,0:13:30.10:0,30,491	0/0:22,0:28:60.16:0,60,945	1/1:4,8:13:20.92:226,21,0	0/0:22,0:24:58.92:0,59,864	0/0:15,0:19:45.09:0,45,664	0/0:15,0:15:36.05:0,36,507	0/0:16,0:18:42.07:0,42,671	1/1:8,15:25:27.95:305,28,0	1/1:5,20:25:48.01:517,48,0	0/0:21,0:25:61.43:0,61,971	0/0:9,0:23:53.30:0,53,772	0/0:24,0:29:76.37:0,76,1134	0/0:5,0:10:24.08:0,24,361
chr10	71082455	.	CA	C	4679.34	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.831;DP=723;FS=14.436;HRun=10;HaplotypeScore=87.3650;InbreedingCoeff=0.9923;MQ=71.96;MQ0=1;MQRankSum=0.801;QD=21.66;ReadPosRankSum=5.876;VQSLOD=4.0903;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,36:42:99:943,110,0	0/0:7,0:7:15.04:0,15,166	0/0:10,0:9:14.93:0,15,141	0/0:21,0:20:17.32:0,17,173	0/0:19,0:20:50.97:0,51,545	0/0:26,0:26:72.02:0,72,763	0/0:38,0:40:99:0,108,1166	0/0:36,0:38:95.91:0,96,1009	0/0:21,1:22:37.11:0,37,630	1/1:0,26:26:77.95:671,78,0	1/1:0,24:24:59.96:521,60,0	0/0:28,0:29:77.99:0,78,823	1/1:1,19:20:50.99:443,51,0	0/0:21,0:22:53.95:0,54,555	0/0:34,0:35:87.05:0,87,929	0/0:29,2:31:38.11:0,38,862	0/0:16,0:16:39.01:0,39,394	1/1:4,24:28:68.98:599,69,0	0/0:21,1:23:33.91:0,34,565	0/0:34,0:34:96.23:0,96,1038	0/0:31,2:33:60.99:0,61,869	0/0:20,0:20:48.13:0,48,531	1/1:2,28:33:75.10:617,75,0	1/1:8,35:43:99:885,102,0	0/0:14,0:14:36.08:0,36,383	0/0:30,2:32:43.13:0,43,704	0/0:21,0:21:57.15:0,57,630	0/0:13,0:13:37.91:0,38,403
chr10	71082888	.	GA	G	1690.74	PASS	AB=0.815;AC=21;AF=0.375;AN=56;BaseQRankSum=7.701;DP=516;FS=0.456;HRun=14;HaplotypeScore=61.3093;InbreedingCoeff=0.5085;MQ=73.50;MQ0=1;MQRankSum=1.954;QD=6.22;ReadPosRankSum=4.032;VQSLOD=2.2807;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,17:30:45.56:299,46,0	0/0:8,1:10:3.27:0,3,157	0/1:18,0:15:2.37:2,0,51	0/0:15,0:12:12.18:0,12,81	0/0:18,1:20:18.23:0,18,287	0/0:12,1:13:12.36:0,12,243	0/0:14,3:18:0.65:0,1,266	0/1:22,4:26:31.20:31,0,305	0/0:16,1:17:12.32:0,12,227	1/1:6,10:16:28.76:190,29,0	0/1:4,12:17:2.61:123,0,3	0/1:17,2:19:5.15:5,0,236	1/1:5,13:18:26.68:182,27,0	0/1:11,1:12:2.69:3,0,102	0/0:23,0:23:39.01:0,39,351	0/0:16,1:17:24.45:0,24,363	0/1:18,4:22:31.30:31,0,305	1/1:1,14:17:36.81:238,37,0	0/0:22,1:24:24.27:0,24,343	0/0:20,2:22:24.43:0,24,357	0/0:16,0:17:35.71:0,36,304	0/0:9,0:10:11.84:0,12,93	1/1:2,8:10:17.83:124,18,0	1/1:8,15:23:38.64:267,39,0	0/0:13,1:17:18.22:0,18,290	1/1:9,18:31:26.70:279,27,0	0/0:20,0:19:48.03:0,48,438	0/1:4,7:12:5.03:106,0,5
chr10	71083046	.	G	GTT	1811.60	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=9.218;DP=382;FS=4.600;HRun=6;HaplotypeScore=67.0236;InbreedingCoeff=0.7629;MQ=84.66;MQ0=3;MQRankSum=-9.178;QD=17.76;ReadPosRankSum=1.259;VQSLOD=0.5965;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,2:9:12.51:173,13,0	0/0:4,0:4:9.03:0,9,110	0/0:34,0:19:32.98:0,33,329	0/1:29,0:17:18.87:19,0,147	0/0:12,0:12:36.07:0,36,401	0/0:17,0:17:24.07:0,24,284	0/0:6,0:6:18.06:0,18,219	0/0:34,0:34:84.25:0,84,1016	0/0:3,0:3:9.03:0,9,110	1/1:11,10:20:41.61:590,42,0	1/1:2,11:15:44.74:656,45,0	0/0:7,0:7:20.98:0,21,230	1/1:6,1:8:12.04:168,12,0	0/0:5,0:5:6.01:0,6,59	0/0:10,0:10:24.06:0,24,278	0/0:15,0:15:30.09:0,30,365	0/0:26,0:26:57.32:0,57,723	1/1:2,2:4:6.02:96,6,0	0/0:24,0:23:62.86:0,63,690	0/0:10,0:10:21.05:0,21,255	0/0:6,0:6:3:0,3,35	0/0:4,0:4:6.02:0,6,72	1/1:6,2:9:21.04:259,21,0	1/1:5,0:5:3.01:35,3,0	0/0:18,0:18:48.12:0,48,560	0/0:17,0:17:28.07:0,28,562	0/0:16,0:16:45.11:0,45,526	0/0:11,0:11:33.05:0,33,363
chr10	71083056	.	GTT	G	375.07	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.204;DP=362;FS=0.000;HRun=14;HaplotypeScore=68.3071;InbreedingCoeff=0.6556;MQ=77.06;MQ0=12;MQRankSum=0.892;QD=13.40;ReadPosRankSum=1.622;VQSLOD=2.5239;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:9.46:0,9,77	0/0:2,0:3:8.52:0,9,93	0/0:40,0:18:26.65:0,27,183	0/0:29,0:13:11.03:0,11,92	0/0:12,0:12:20.56:0,21,261	0/0:16,1:18:23.91:0,24,262	0/0:6,0:7:21.06:0,21,281	0/0:30,0:32:56.16:0,56,638	0/0:3,0:3:6.02:0,6,84	0/0:17,0:16:32.35:0,32,237	0/0:15,0:15:40.97:0,41,333	0/0:7,0:7:18.03:0,18,219	0/0:6,0:6:6:0,6,54	0/0:3,0:4:3.01:0,3,42	0/0:6,0:7:18:0,18,216	0/0:12,0:13:24.08:0,24,323	0/0:27,0:28:68.58:0,69,873	0/0:8,0:5:8.87:0,9,66	0/0:21,0:19:39.51:0,40,461	0/0:7,0:10:20.84:0,21,188	0/0:2,0:2:5.34:0,5,28	0/0:1,0:1:0:0,0,0	0/0:8,0:8:11.98:0,12,100	0/0:1,0:1:0:0,0,0	0/0:12,0:14:39.05:0,39,465	1/1:6,12:18:15.98:303,16,0	0/0:15,0:16:42.14:0,42,576	1/1:1,7:8:14.88:186,15,0
chr10	71083063	.	T	TTTTG	1866.41	PASS	AB=0.869;AC=12;AF=0.214;AN=56;BaseQRankSum=7.709;DP=359;FS=3.857;HRun=0;HaplotypeScore=72.2574;InbreedingCoeff=0.5352;MQ=68.37;MQ0=26;MQRankSum=-6.531;QD=15.17;ReadPosRankSum=-0.332;VQSLOD=3.0991;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:9:10.87:144,11,0	0/0:3,0:3:9.03:0,9,140	0/1:38,0:14:21.75:22,0,119	0/0:28,0:10:11.12:0,11,157	0/0:10,0:10:24.03:0,24,366	0/0:19,0:19:29.88:0,30,354	0/0:8,0:7:21.03:0,21,330	0/0:30,0:27:65.42:0,65,824	0/0:4,0:4:8.99:0,9,123	1/1:6,6:17:38.84:630,39,0	1/1:4,10:15:41.79:863,42,0	0/0:8,0:8:21.02:0,21,300	0/1:4,0:4:2.76:84,0,3	0/0:4,0:4:3.01:0,3,52	0/0:8,0:7:20.98:0,21,273	0/0:11,0:11:24.04:0,24,382	0/0:32,0:29:70.36:0,70,1083	0/1:5,0:5:6.99:93,0,7	0/0:21,0:16:41.33:0,41,562	0/0:7,0:7:20.76:0,21,224	0/0:2,0:2:5.98:0,6,53	0/0:1,0:1:0:0,0,0	1/1:3,0:8:11.81:173,12,0	0/0:1,0:1:0:0,0,0	0/0:15,0:15:41.94:0,42,547	0/1:18,1:17:21.23:21,0,468	0/0:15,0:15:45.10:0,45,715	0/0:9,0:8:24.07:0,24,288
chr10	71084815	.	A	ACC	155.46	PASS	AB=0.700;AC=1;AF=0.018;AN=56;BaseQRankSum=1.906;DP=495;FS=3.484;HRun=0;HaplotypeScore=80.3629;InbreedingCoeff=-0.0231;MQ=50.95;MQ0=28;MQRankSum=-1.978;QD=11.10;ReadPosRankSum=-0.479;VQSLOD=3.2824;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:29.88:0,30,335	0/0:9,0:9:26.96:0,27,327	0/0:39,0:10:18.11:0,18,141	0/0:29,0:11:10.80:0,11,73	0/0:18,0:18:37.93:0,38,479	0/0:28,0:26:69.12:0,69,907	0/0:15,0:15:42.12:0,42,547	0/0:23,0:22:53.37:0,53,643	0/0:8,0:6:18.04:0,18,229	0/0:21,0:21:57.18:0,57,757	0/0:14,0:14:30.08:0,30,371	0/0:10,0:8:12.93:0,13,168	0/0:7,0:6:11.97:0,12,111	0/0:11,0:11:29.96:0,30,356	0/0:18,0:18:33.08:0,33,422	0/0:23,0:23:66.17:0,66,877	0/0:24,0:22:49:0,49,618	0/1:8,5:14:99:230,0,155	0/0:15,0:14:39.09:0,39,514	0/0:15,0:15:42.02:0,42,468	0/0:10,0:10:25.25:0,25,278	0/0:11,0:10:24.04:0,24,315	0/0:11,0:11:25.87:0,26,284	0/0:10,0:9:14.65:0,15,155	0/0:22,0:22:59.54:0,60,752	0/0:22,0:22:60.08:0,60,742	0/0:20,0:18:48.11:0,48,602	0/0:25,0:18:36:0,36,401
chr10	71084989	.	TGAACTGTCACGGCAA	T	7143.31	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.579;DP=603;FS=5.157;HRun=0;HaplotypeScore=244.4643;InbreedingCoeff=0.9502;MQ=73.77;MQ0=0;MQRankSum=-11.450;QD=72.15;ReadPosRankSum=3.338;VQSLOD=3.9736;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,27:35:78.27:3293,78,0	0/0:10,0:10:30.10:0,30,1996	0/0:13,0:13:36.12:0,36,1910	0/0:14,0:14:33.08:0,33,1708	0/0:25,0:25:72.21:0,72,4672	0/0:28,0:28:72.25:0,72,4437	0/0:28,0:28:81.28:0,81,5078	0/0:29,0:29:75.25:0,75,4951	0/0:19,0:19:54.19:0,54,3869	0/0:25,0:25:69.23:0,69,4540	0/0:19,0:19:51.18:0,51,3336	0/0:20,0:20:57.20:0,57,3713	1/1:5,12:17:24.08:1063,24,0	0/0:22,0:22:60.21:0,60,3841	0/0:31,0:31:87.30:0,87,6307	0/0:30,0:30:87.30:0,87,6156	0/0:28,0:28:84.27:0,84,5824	1/1:3,14:17:27.09:1194,27,0	0/0:25,0:25:66.23:0,66,3864	0/0:17,0:17:51.18:0,51,3473	0/0:39,0:39:99:0,114,7257	0/0:13,0:13:39.12:0,39,2527	1/1:3,2:5:6.02:266,6,0	1/1:3,22:25:30.10:1328,30,0	0/0:24,0:24:66.23:0,66,4753	0/0:23,0:23:63.22:0,63,4438	0/0:19,0:19:54.19:0,54,3974	0/0:3,0:3:6.02:0,6,446
chr10	71085275	.	C	CAA	3749.25	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=11.013;DP=598;FS=0.891;HRun=7;HaplotypeScore=126.8336;InbreedingCoeff=0.8860;MQ=79.04;MQ0=4;MQRankSum=-9.232;QD=21.18;ReadPosRankSum=-2.434;VQSLOD=1.3848;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,12:22:49.35:678,49,0	0/0:7,0:7:9.01:0,9,105	0/0:46,0:31:24.73:0,25,369	0/1:53,0:38:12.21:12,0,237	0/0:33,0:33:84.20:0,84,967	0/0:24,0:24:57.13:0,57,652	0/0:18,0:18:48.13:0,48,559	0/0:27,0:27:60.15:0,60,699	0/0:15,0:15:42.12:0,42,483	1/1:18,10:28:57.10:799,57,0	1/1:7,7:14:32.97:395,33,0	0/0:22,0:22:48.11:0,48,559	1/1:6,11:19:46.57:671,47,0	0/0:21,0:21:57.15:0,57,653	0/0:29,0:29:72.20:0,72,839	0/0:21,0:21:45.11:0,45,524	0/0:12,0:12:36.11:0,36,419	1/1:7,9:13:36.12:558,36,0	0/0:20,0:20:39.07:0,39,440	0/0:27,0:27:57.11:0,57,642	0/0:5,0:5:12.04:0,12,140	0/0:16,0:16:39.10:0,39,454	1/1:7,6:13:27.09:400,27,0	1/1:7,2:9:15.05:237,15,0	0/0:21,0:21:42.07:0,42,479	0/0:27,0:27:60.16:0,60,699	0/0:23,0:23:60.18:0,60,698	0/0:4,0:4:9.02:0,9,105
chr10	71085282	.	AGG	A	1542.20	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.434;DP=596;FS=2.016;HRun=2;HaplotypeScore=125.9634;InbreedingCoeff=0.9448;MQ=77.88;MQ0=5;MQRankSum=-7.875;QD=13.77;ReadPosRankSum=0.927;VQSLOD=0.9182;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:21,2:22:40.44:350,40,0	0/0:7,0:7:21.05:0,21,302	0/0:63,1:36:1.21:0,1,685	0/0:53,0:34:40.59:0,41,516	0/0:34,0:34:74.61:0,75,1436	0/0:25,0:25:75.23:0,75,1119	0/0:18,0:18:54.18:0,54,856	0/0:28,0:28:84.29:0,84,1309	0/0:15,0:15:45.15:0,45,694	1/1:19,3:22:14.97:213,15,0	1/1:12,0:12:24.28:213,24,0	0/0:21,0:21:63.10:0,63,945	1/1:18,1:19:40.53:369,41,0	0/0:21,0:21:62.40:0,62,920	0/0:28,0:28:84.28:0,84,1312	0/0:19,0:19:57.19:0,57,899	0/0:12,0:12:36.12:0,36,577	1/1:16,0:13:29.44:349,29,0	0/0:20,0:20:45.67:0,46,750	0/0:26,0:26:75.05:0,75,1038	0/0:5,0:5:14.94:0,15,205	0/0:14,0:14:42.14:0,42,634	1/1:10,2:12:24.44:184,24,0	1/1:6,2:8:11.06:58,11,0	0/0:18,0:18:50.89:0,51,748	0/0:25,0:25:75.26:0,75,1178	0/0:23,0:23:66.22:0,66,1009	0/0:7,0:7:21.07:0,21,329
chr10	71085284	.	GAA	G	1921.20	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.999;DP=602;FS=0.000;HRun=10;HaplotypeScore=126.1604;InbreedingCoeff=0.9531;MQ=78.61;MQ0=6;MQRankSum=-10.364;QD=17.47;ReadPosRankSum=1.085;VQSLOD=1.9726;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,15:21:43.22:392,43,0	0/0:7,0:7:12.04:0,12,191	0/0:65,0:37:51.01:0,51,746	0/0:58,0:35:16.64:0,17,557	0/0:33,0:33:61.31:0,61,1252	0/0:24,0:24:69.24:0,69,1095	0/0:17,0:17:42.14:0,42,667	0/0:28,0:28:60.20:0,60,951	0/0:15,0:15:39.13:0,39,619	1/1:8,14:22:41.71:423,42,0	1/1:3,9:12:29.46:259,29,0	0/0:21,0:22:56.47:0,56,826	1/1:6,13:19:45.02:418,45,0	0/0:20,0:20:57.19:0,57,888	0/0:27,0:28:77.75:0,78,1199	0/0:19,0:19:51.16:0,51,778	0/0:11,0:11:33.11:0,33,524	1/1:6,10:13:36.08:373,36,0	0/0:21,0:22:43.17:0,43,597	0/0:25,0:27:68.25:0,68,955	0/0:5,0:5:12.04:0,12,190	0/0:11,0:13:35.09:0,35,493	1/1:4,7:11:24:224,24,0	1/1:6,2:8:2.97:24,3,0	0/0:17,0:17:45.15:0,45,703	0/0:26,0:26:57.19:0,57,905	0/0:21,0:23:61.73:0,62,912	0/0:7,0:7:21.07:0,21,333
chr10	71085298	.	TA	T	587.49	PASS	AB=0.883;AC=17;AF=0.304;AN=56;BaseQRankSum=12.269;DP=597;FS=0.903;HRun=10;HaplotypeScore=124.8471;InbreedingCoeff=0.6910;MQ=79.86;MQ0=7;MQRankSum=-10.235;QD=3.01;ReadPosRankSum=0.903;VQSLOD=0.3989;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:33.69:139,34,0	0/1:6,1:7:11.03:11,0,103	0/1:74,1:41:24.06:24,0,238	0/0:55,0:29:10.53:0,11,138	0/0:31,1:32:40.78:0,41,683	0/0:23,0:24:65.97:0,66,684	0/0:15,0:15:17.32:0,17,263	0/0:25,2:27:18.57:0,19,481	0/0:12,0:12:33.04:0,33,344	1/1:15,0:15:31.53:131,32,0	1/1:13,0:13:25.81:101,26,0	0/0:17,1:18:13.81:0,14,443	1/1:19,0:19:41.50:163,42,0	0/0:22,0:22:48.03:0,48,477	0/0:30,1:31:46.86:0,47,697	0/0:19,0:19:54.08:0,54,549	0/0:13,0:13:36.10:0,36,398	1/1:17,1:15:23.43:94,23,0	0/0:18,0:19:44.16:0,44,419	0/0:22,0:22:57.10:0,57,606	0/1:6,2:8:27.30:27,0,157	0/0:15,0:15:34.85:0,35,349	1/1:10,0:10:18.25:73,18,0	1/1:8,0:8:5.11:20,5,0	0/0:22,0:22:60.10:0,60,622	0/0:22,0:22:53.24:0,53,511	0/0:24,0:24:63.09:0,63,650	0/0:10,0:10:2.82:0,3,211
chr10	71085305	.	AAAAG	A	185.09	PASS	AB=0.979;AC=9;AF=0.161;AN=56;BaseQRankSum=11.348;DP=585;FS=27.204;HRun=0;HaplotypeScore=153.2758;InbreedingCoeff=0.2844;MQ=77.72;MQ0=5;MQRankSum=-9.861;QD=1.75;ReadPosRankSum=1.418;VQSLOD=1.1876;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:30.50:51,0,31	0/0:7,0:7:18.06:0,18,416	0/0:67,0:35:71.83:0,72,1226	0/0:48,0:24:48.38:0,48,649	0/0:28,0:28:78.25:0,78,1955	0/0:23,0:23:69.22:0,69,1791	0/0:16,0:16:48.14:0,48,1054	0/0:25,0:25:75.23:0,75,1642	0/0:12,0:12:33.11:0,33,878	0/1:15,2:17:35.52:56,0,36	0/1:14,0:14:34.40:50,0,34	0/0:21,0:21:63.18:0,63,1456	0/1:17,0:17:17.62:24,0,18	0/0:16,0:16:48.16:0,48,1245	0/0:28,0:28:84.28:0,84,2137	0/0:20,0:20:60.18:0,60,1446	0/0:14,0:14:42.12:0,42,1053	0/1:18,0:15:11.91:12,0,34	0/0:20,0:20:54.17:0,54,1325	0/0:24,0:24:69.21:0,69,1734	0/0:8,0:8:24.08:0,24,564	0/0:15,0:15:42.09:0,42,1028	1/1:10,1:11:19.10:108,19,0	1/1:7,1:8:3.81:28,4,0	0/0:22,0:22:66.23:0,66,1682	0/0:27,0:27:81.23:0,81,1731	0/0:26,0:26:72.20:0,72,1742	0/0:11,0:11:33.10:0,33,754
chr10	71085307	.	AAG	A	2940.73	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.392;DP=589;FS=4.564;HRun=0;HaplotypeScore=123.4005;InbreedingCoeff=0.9918;MQ=78.33;MQ0=5;MQRankSum=-12.240;QD=28.55;ReadPosRankSum=1.486;VQSLOD=4.9398;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,14:21:50.65:579,51,0	0/0:7,0:7:17.78:0,18,259	0/0:69,0:37:47.41:0,47,599	0/0:47,0:23:29.19:0,29,363	0/0:28,0:28:77.46:0,77,1222	0/0:23,0:23:69.20:0,69,1161	0/0:15,0:15:45.08:0,45,623	0/0:27,0:27:65.48:0,65,1019	0/0:12,0:12:33.11:0,33,568	1/1:5,12:17:44.60:548,45,0	1/1:2,10:12:33.04:437,33,0	0/0:20,0:20:59.72:0,60,884	1/1:1,16:17:48.14:673,48,0	0/0:17,0:17:51.10:0,51,800	0/0:28,0:28:83.97:0,84,1347	0/0:20,0:20:60.11:0,60,897	0/0:15,0:15:45.11:0,45,740	1/1:4,12:13:27.09:381,27,0	0/0:19,0:19:51.13:0,51,803	0/0:23,0:23:66.19:0,66,1107	0/0:8,0:8:23.40:0,23,332	0/0:14,0:14:42.02:0,42,641	1/1:3,8:11:33:386,33,0	1/1:3,6:9:11.96:134,12,0	0/0:22,0:22:63.16:0,63,1044	0/0:29,0:29:87.15:0,87,1178	0/0:28,0:28:78.13:0,78,1171	0/0:15,0:15:42.65:0,43,535
chr10	71085327	.	T	TG	2352.09	PASS	AB=0.913;AC=15;AF=0.268;AN=56;BaseQRankSum=12.812;DP=519;FS=0.409;HRun=1;HaplotypeScore=103.3870;InbreedingCoeff=0.9289;MQ=72.34;MQ0=0;MQRankSum=-10.247;QD=17.42;ReadPosRankSum=0.036;VQSLOD=3.7174;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,1:23:62.68:546,63,0	0/0:11,0:11:22.18:0,22,304	0/0:28,0:23:34.62:0,35,397	0/1:19,0:13:4.99:5,0,163	0/0:20,0:20:57.13:0,57,677	0/0:20,0:20:43.79:0,44,592	0/0:19,0:19:57.13:0,57,688	0/0:34,0:34:80.40:0,80,1009	0/0:13,0:13:36.09:0,36,425	1/1:14,1:15:38.76:306,39,0	1/1:17,0:18:44.38:370,44,0	0/0:18,0:18:51.14:0,51,615	1/1:15,1:16:41.86:371,42,0	0/0:13,0:13:38.10:0,38,422	0/0:16,0:16:48.11:0,48,577	0/0:18,0:18:54.13:0,54,654	0/0:21,0:21:60.15:0,60,733	1/1:18,2:17:39.03:388,39,0	0/0:22,0:22:54:0,54,702	0/0:22,0:22:66.15:0,66,781	0/0:9,0:9:27.05:0,27,320	0/0:13,0:13:39.08:0,39,451	1/1:13,1:14:35.89:337,36,0	1/1:7,1:8:23.97:229,24,0	0/0:28,0:28:81.10:0,81,933	0/0:24,0:24:62.79:0,63,485	0/0:21,0:21:57.14:0,57,668	0/0:14,0:14:41.76:0,42,312
chr10	71085328	.	G	GGT	4872.90	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.964;DP=513;FS=0.873;HRun=0;HaplotypeScore=101.7473;InbreedingCoeff=0.9910;MQ=70.96;MQ0=0;MQRankSum=-10.513;QD=42.74;ReadPosRankSum=0.037;VQSLOD=6.3524;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,17:23:62.90:1011,63,0	0/0:10,0:11:29.16:0,29,380	0/0:25,0:22:46.21:0,46,496	0/0:17,0:10:10.22:0,10,207	0/0:19,0:19:57.08:0,57,776	0/0:19,0:20:54.53:0,55,729	0/0:19,0:19:57.17:0,57,859	0/0:31,0:33:93.23:0,93,1289	0/0:13,0:13:36.09:0,36,512	1/1:6,8:14:38.81:530,39,0	1/1:2,16:19:48.06:863,48,0	0/0:18,0:18:54.12:0,54,763	1/1:4,11:15:41.64:713,42,0	0/0:13,0:13:38.10:0,38,503	0/0:16,0:16:46.68:0,47,675	0/0:18,0:18:54.16:0,54,817	0/0:22,0:22:60.15:0,60,899	1/1:6,14:17:39.01:658,39,0	0/0:21,0:22:59.38:0,59,876	0/0:22,0:22:66.18:0,66,963	0/0:9,0:9:27.06:0,27,386	0/0:13,0:13:39.10:0,39,552	1/1:3,12:15:39.51:673,40,0	1/1:1,7:8:24.04:426,24,0	0/0:27,0:28:84.21:0,84,1177	0/0:4,0:23:60.56:0,61,580	0/0:21,0:21:57.15:0,57,795	0/0:0,0:14:42.07:0,42,407
chr10	71087595	.	A	ATG	1629.63	PASS	AB=0.550;AC=3;AF=0.054;AN=56;BaseQRankSum=-7.963;DP=598;FS=0.000;HRun=0;HaplotypeScore=69.7625;InbreedingCoeff=0.7215;MQ=66.79;MQ0=1;MQRankSum=1.195;QD=31.95;ReadPosRankSum=2.968;VQSLOD=5.5533;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,114,1346	0/0:3,0:3:9.03:0,9,114	0/0:17,0:12:5.19:0,5,99	0/0:21,0:19:23.54:0,24,284	0/0:21,0:21:54.16:0,54,671	0/0:11,0:11:27.09:0,27,344	0/0:27,0:27:72.20:0,72,888	0/0:26,0:26:57.15:0,57,679	0/0:12,0:12:24.06:0,24,292	0/0:16,0:16:47.80:0,48,551	0/0:12,0:12:36.06:0,36,415	0/0:14,0:14:30.07:0,30,354	0/0:23,0:23:63.17:0,63,774	0/0:24,0:24:63.14:0,63,733	0/0:30,0:30:75.17:0,75,885	0/0:17,0:17:36.07:0,36,418	0/0:30,0:30:53.21:0,53,864	0/0:35,0:35:81.22:0,81,999	0/0:22,0:22:54.03:0,54,595	0/0:17,0:17:45.09:0,45,513	0/0:34,0:33:87.11:0,87,1048	0/0:17,0:17:42.10:0,42,507	0/0:17,0:17:39.10:0,39,469	0/0:29,0:29:75.10:0,75,849	0/0:10,0:10:30.08:0,30,368	1/1:4,25:29:75.25:1220,75,0	0/0:15,0:15:42.10:0,42,505	0/1:4,18:22:2.05:516,0,2
chr10	71088902	.	T	TA	1217.97	PASS	AB=0.990;AC=12;AF=0.214;AN=56;BaseQRankSum=-0.334;DP=601;FS=0.000;HRun=7;HaplotypeScore=67.3432;InbreedingCoeff=0.5920;MQ=69.05;MQ0=1;MQRankSum=1.172;QD=7.71;ReadPosRankSum=-3.754;VQSLOD=-0.2031;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:2.62:143,3,0	0/0:7,0:7:15:0,15,137	0/1:22,0:9:24.55:25,0,51	0/1:16,0:11:2.75:3,0,57	0/0:30,0:30:87.08:0,87,815	0/0:23,0:23:62.48:0,62,559	0/0:18,0:18:51.07:0,51,487	0/0:35,0:35:93.02:0,93,843	0/0:21,0:21:57.04:0,57,529	0/0:31,0:31:78.01:0,78,727	0/0:20,0:20:51.03:0,51,474	0/0:16,0:16:36.01:0,36,338	1/1:20,0:19:13.40:109,13,0	0/0:23,0:23:63.02:0,63,584	0/0:35,0:35:96.01:0,96,901	0/0:25,0:25:72.07:0,72,676	0/0:27,0:27:72.04:0,72,665	0/1:12,0:12:3.87:14,0,4	0/0:20,0:20:51.04:0,51,477	0/0:24,0:24:60.05:0,60,562	0/0:10,0:10:30.03:0,30,284	0/0:14,0:14:39.05:0,39,369	0/1:20,0:20:6.03:51,0,6	0/0:13,0:13:5.93:0,6,16	0/0:26,0:26:63.05:0,63,590	1/1:3,28:31:64.10:902,64,0	0/0:25,0:25:68.91:0,69,623	1/1:1,4:5:12.02:132,12,0
chr10	71089170	.	G	GA	852.74	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=5.400;DP=396;FS=3.418;HRun=0;HaplotypeScore=77.2836;InbreedingCoeff=0.7322;MQ=44.03;MQ0=20;MQRankSum=-1.538;QD=5.76;ReadPosRankSum=2.269;VQSLOD=3.1725;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:10.80:124,11,0	0/0:9,0:9:14.90:0,15,96	0/0:27,0:6:14.64:0,15,147	0/0:25,0:4:6.87:0,7,33	0/0:13,0:13:17.02:0,17,131	0/0:14,0:14:10.33:0,10,156	0/0:19,0:17:13.24:0,13,89	0/0:12,0:11:21.11:0,21,204	0/0:14,0:14:21.74:0,22,159	1/1:9,0:9:20.71:145,21,0	1/1:9,0:9:2.48:21,2,0	0/1:14,0:14:0.43:0,0,105	1/1:19,0:18:25.89:161,26,0	0/0:8,0:8:15.46:0,15,127	0/0:14,0:14:26.29:0,26,189	0/0:15,0:14:7.76:0,8,70	0/0:23,0:22:41.68:0,42,311	0/1:12,0:11:17.66:33,0,18	0/0:9,0:7:11.92:0,12,101	0/0:8,0:8:9.21:0,9,64	0/0:9,0:8:17.70:0,18,141	0/0:11,0:10:15.47:0,15,130	1/1:20,0:18:11.77:92,12,0	1/1:28,0:28:30.29:265,30,0	0/0:9,0:9:10.81:0,11,77	1/1:5,8:13:22.28:176,22,0	0/0:9,0:9:20.05:0,20,130	1/1:4,0:2:2.99:24,3,0
chr10	71089174	.	C	CGA	679.20	PASS	AB=0.963;AC=21;AF=0.404;AN=52;BaseQRankSum=3.288;DP=416;FS=6.559;HRun=0;HaplotypeScore=81.1011;InbreedingCoeff=0.4390;MQ=45.02;MQ0=22;MQRankSum=-2.886;QD=3.59;ReadPosRankSum=-1.882;VQSLOD=0.9032;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:19:2.99:23,3,0	0/1:7,0:8:8.20:8,0,67	./.	./.	0/0:14,0:14:18.43:0,18,135	0/1:12,0:13:18.37:18,0,181	0/0:20,0:18:10.73:0,11,77	1/1:18,2:19:13.69:146,14,0	0/0:13,0:13:14.66:0,15,127	1/1:10,0:10:6.26:39,6,0	1/1:7,0:7:2.33:21,2,0	0/0:16,0:16:14.87:0,15,147	1/1:20,1:20:14.61:135,15,0	0/0:6,0:6:14.87:0,15,147	0/0:15,0:15:22.59:0,23,187	0/0:14,0:15:8.86:0,9,80	0/0:25,0:24:43.06:0,43,358	0/1:10,2:12:4.38:159,0,4	1/1:10,0:8:0.47:1,0,0	0/0:8,0:8:9.02:0,9,100	0/0:10,0:11:4.12:0,4,101	0/0:14,0:13:5.05:0,5,145	1/1:20,0:19:9.95:88,10,0	1/1:25,0:28:6.81:128,7,0	0/0:8,0:8:12.01:0,12,123	0/1:13,0:13:4.22:46,0,4	0/0:7,0:8:11.39:0,11,71	0/1:6,0:3:27.14:35,0,27
chr10	71091228	.	CA	C	281.42	PASS	AB=0.925;AC=6;AF=0.107;AN=56;BaseQRankSum=0.948;DP=650;FS=0.671;HRun=12;HaplotypeScore=79.1928;InbreedingCoeff=0.5562;MQ=58.52;MQ0=3;MQRankSum=-0.093;QD=4.14;ReadPosRankSum=0.241;VQSLOD=1.1518;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,107,601	0/0:14,0:14:3.83:0,4,205	0/1:24,1:13:21.30:21,0,76	0/0:16,0:11:13.40:0,13,157	0/0:22,1:25:35.93:0,36,510	0/0:22,0:24:47.91:0,48,460	0/0:20,0:22:47.90:0,48,456	0/0:30,1:32:41.26:0,41,558	0/0:19,0:20:41.92:0,42,409	0/0:15,0:15:33.07:0,33,334	0/0:16,0:18:47.88:0,48,460	0/0:15,0:15:42.07:0,42,415	0/0:27,0:27:71.92:0,72,406	0/0:21,1:21:48.09:0,48,484	0/0:22,0:24:59:0,59,594	0/0:23,2:25:33.88:0,34,524	0/0:42,0:42:99:0,102,1005	0/0:29,0:29:64.55:0,65,373	0/0:16,0:19:4.80:0,5,335	0/0:20,1:23:27.35:0,27,402	0/1:13,2:16:9.69:10,0,249	0/0:17,1:19:21.69:0,22,385	0/0:24,0:24:51.92:0,52,301	0/0:38,0:38:83.36:0,83,459	0/0:18,0:20:41.74:0,42,395	1/1:6,15:21:25.31:283,25,0	0/0:20,0:24:53.92:0,54,520	1/1:0,5:6:13.99:99,14,0
chr10	71094897	.	A	ATTGTGCATGTCAC	2812.15	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=0.092;DP=860;FS=0.891;HRun=0;HaplotypeScore=304.1126;InbreedingCoeff=0.7081;MQ=73.55;MQ0=0;MQRankSum=-6.281;QD=27.30;ReadPosRankSum=-2.648;VQSLOD=1.3925;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,102,3229	0/0:10,0:10:15.05:0,15,549	0/0:19,0:19:6.48:0,6,59	0/0:26,0:26:9:0,9,84	0/0:44,0:44:60.21:0,60,2176	0/0:23,0:23:36.12:0,36,1181	0/0:38,0:38:63.22:0,63,2002	0/0:36,0:36:29.35:0,29,474	0/0:29,0:29:75.26:0,75,2504	1/1:29,6:37:42.14:2113,42,0	1/1:21,3:26:12.04:699,12,0	0/0:31,0:31:54.17:0,54,1875	0/0:32,0:32:48.16:0,48,1550	0/0:35,0:35:72.18:0,72,2182	0/0:39,0:39:72.22:0,72,2290	0/0:48,0:48:84.29:0,84,3058	0/0:39,0:39:60.19:0,60,1959	0/0:25,0:25:54.15:0,54,1703	0/0:24,0:24:27.09:0,27,987	0/0:19,0:19:24.08:0,24,851	0/0:49,0:48:84.21:0,84,2273	0/0:22,0:22:33.10:0,33,1049	0/0:22,0:22:30.07:0,30,1008	0/0:34,0:34:60.14:0,60,1817	0/0:16,0:16:36.12:0,36,1095	0/1:40,0:40:99:125,0,1835	0/0:34,0:34:48.12:0,48,1706	0/0:11,0:11:27.09:0,27,988
chr10	71095736	.	AAC	A	549.75	PASS	AB=0.908;AC=13;AF=0.232;AN=56;BaseQRankSum=6.671;DP=642;FS=2.664;HRun=0;HaplotypeScore=77.1148;InbreedingCoeff=0.0430;MQ=62.93;MQ0=7;MQRankSum=-0.481;QD=2.45;ReadPosRankSum=3.484;VQSLOD=1.2596;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,2:37:40.90:0,41,1028	0/0:12,0:13:27.06:0,27,353	0/0:30,0:17:8.63:0,9,75	0/0:29,0:22:21.05:0,21,300	0/1:6,1:7:16.26:16,0,211	0/0:17,0:17:6.20:0,6,307	0/0:23,3:26:7.81:0,8,547	0/0:27,0:26:17.70:0,18,319	0/1:20,2:22:11.51:12,0,661	0/1:16,1:17:4.26:4,0,329	0/1:12,1:14:4.22:4,0,367	0/0:16,2:17:1.80:0,2,473	0/0:12,0:12:29.77:0,30,420	0/0:26,1:28:2.66:0,3,582	0/1:25,3:28:20.48:20,0,600	0/1:19,2:21:26.53:27,0,489	0/0:29,4:34:0.53:0,1,834	0/1:28,3:31:39.80:40,0,694	0/1:21,3:21:24.28:24,0,310	0/0:19,0:18:19.80:0,20,494	0/0:34,1:34:29.84:0,30,888	0/0:19,0:19:7.61:0,8,531	0/0:19,1:20:33.09:0,33,486	0/0:31,1:33:22.86:0,23,780	0/0:18,0:18:36.06:0,36,456	1/1:10,5:17:23.47:212,23,0	0/1:26,4:30:8.01:8,0,748	1/1:1,10:13:32.59:337,33,0
chr10	71097888	.	A	ATGTT	424.53	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.077;DP=718;FS=0.000;HRun=0;HaplotypeScore=111.0261;InbreedingCoeff=0.9711;MQ=72.98;MQ0=1;MQRankSum=-1.622;QD=28.30;ReadPosRankSum=1.477;VQSLOD=3.2271;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.16:0,51,824	0/0:12,0:12:27.09:0,27,450	0/0:25,0:17:18.06:0,18,276	0/0:20,0:17:15.04:0,15,229	0/0:41,0:41:81.26:0,81,1324	0/0:32,0:32:78.27:0,78,1296	0/0:19,0:19:36.12:0,36,596	0/0:42,0:42:84.27:0,84,1353	0/0:26,0:26:57.19:0,57,949	0/0:36,0:36:93.32:0,93,1548	0/0:26,0:26:45.15:0,45,749	0/0:21,0:21:48.15:0,48,771	0/0:30,0:30:75.26:0,75,1249	0/0:17,0:17:36.11:0,36,574	0/0:28,0:28:75.24:0,75,1222	0/0:35,0:35:78.25:0,78,1271	0/0:34,0:34:84.24:0,84,1317	1/1:2,11:13:21.07:517,21,0	0/0:17,0:17:33.07:0,33,464	0/0:16,0:16:39.13:0,39,649	0/0:33,0:33:90.27:0,90,1442	0/0:16,0:16:42.13:0,42,663	0/0:23,0:23:51.17:0,51,849	0/0:32,0:32:81.25:0,81,1320	0/0:17,0:17:42.14:0,42,699	0/0:32,0:32:78.27:0,78,1298	0/0:30,0:30:75.23:0,75,1221	0/0:24,0:24:54.18:0,54,898
chr10	71098474	.	ATCTCTC	A	1164.78	PASS	AB=1.000;AC=14;AF=0.292;AN=48;BaseQRankSum=3.017;DP=549;FS=29.014;HRun=0;HaplotypeScore=109.8838;InbreedingCoeff=0.4075;MQ=57.05;MQ0=20;MQRankSum=0.807;QD=7.47;ReadPosRankSum=3.487;VQSLOD=0.2922;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:27:27.58:319,0,28	./.	./.	0/0:41,0:18:0.47:0,0,2	0/0:13,3:14:3.01:0,3,85	0/0:19,0:19:5.38:0,5,58	0/0:22,0:22:3.03:0,3,253	0/0:27,0:27:8.51:0,9,70	0/0:17,0:16:3.01:0,3,37	1/1:17,0:17:9.03:170,9,0	1/1:8,0:8:6.02:116,6,0	0/0:18,0:18:7.22:0,7,125	1/1:12,0:15:0.47:1,0,0	0/0:14,0:14:6.02:0,6,136	0/0:28,0:26:3:0,3,25	0/0:25,0:24:18.50:0,18,331	0/0:20,0:20:28.62:0,29,621	1/1:12,0:12:18.06:326,18,0	0/0:12,0:12:3.01:0,3,74	0/0:18,0:18:0.94:0,1,2	0/1:38,0:37:48.80:49,0,162	0/0:13,0:13:3.01:0,3,64	./.	1/1:21,0:19:11.99:203,12,0	0/0:18,0:18:3.48:0,3,38	1/1:10,0:13:9.03:126,9,0	0/0:20,0:19:12.50:0,13,192	./.
chr10	71099541	.	C	CCA	10137.44	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-14.547;DP=717;FS=4.129;HRun=0;HaplotypeScore=76.0842;InbreedingCoeff=0.9993;MQ=73.84;MQ0=0;MQRankSum=-0.942;QD=48.50;ReadPosRankSum=1.879;VQSLOD=6.1574;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:30:69.24:1287,69,0	0/0:13,0:13:36.07:0,36,489	0/0:9,0:9:23.81:0,24,336	0/0:14,0:14:29.15:0,29,388	0/0:20,0:20:60.20:0,60,883	0/0:19,0:19:57.08:0,57,809	0/0:22,0:22:63.21:0,63,928	0/0:23,0:23:63.21:0,63,911	0/0:36,0:36:99:0,102,1461	1/1:2,28:31:86.91:1531,87,0	1/1:0,15:15:36.12:674,36,0	0/0:29,0:29:81.27:0,81,1193	1/1:1,24:25:69.24:1285,69,0	0/0:25,0:25:75.24:0,75,1083	0/0:38,0:38:99:0,114,1643	0/0:22,0:22:63.20:0,63,908	0/0:43,0:43:99:0,126,1816	0/0:24,0:24:69.21:0,69,978	0/0:29,0:29:87.29:0,87,1261	0/0:21,0:21:63.16:0,63,851	0/0:45,0:45:99:0,135,1970	0/0:32,0:32:93.31:0,93,1354	1/1:1,31:32:96.33:1791,96,0	1/1:1,41:42:99:1966,105,0	0/0:15,0:15:42.14:0,42,618	1/1:0,19:20:60.21:1107,60,0	0/0:29,0:29:78.25:0,78,1128	1/1:1,11:14:27.09:497,27,0
chr10	71100099	.	A	AC	412.25	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.844;DP=289;FS=1.071;HRun=7;HaplotypeScore=35.7834;InbreedingCoeff=0.6710;MQ=71.43;MQ0=0;MQRankSum=-2.198;QD=18.74;ReadPosRankSum=1.402;VQSLOD=2.7880;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,17:22:42.13:507,42,0	0/0:3,0:3:9.01:0,9,87	0/0:11,0:9:15:0,15,138	0/0:7,0:6:15.01:0,15,140	0/0:8,0:8:12.01:0,12,116	0/0:11,0:11:30.05:0,30,290	0/0:24,0:24:66.10:0,66,636	0/0:10,0:10:18.02:0,18,174	0/0:8,0:8:15.02:0,15,145	0/0:5,0:5:9.01:0,9,87	0/0:7,0:7:18.02:0,18,172	0/0:11,0:11:27.03:0,27,257	0/0:9,0:9:23.99:0,24,222	0/0:9,0:9:18.01:0,18,174	0/0:12,0:12:34.85:0,35,318	0/0:11,0:11:27.04:0,27,261	0/0:10,0:10:27.03:0,27,256	0/0:11,0:11:12.57:0,13,262	0/0:6,0:6:18.03:0,18,172	0/0:7,0:7:18.03:0,18,174	0/0:22,0:22:36.02:0,36,342	0/0:11,0:11:24.03:0,24,231	0/0:5,0:5:15.01:0,15,139	0/0:12,0:12:36.06:0,36,347	0/0:16,0:16:42.05:0,42,400	0/0:10,0:10:21.03:0,21,201	0/0:9,0:9:18.02:0,18,174	0/0:2,0:2:3:0,3,29
chr10	71100575	.	A	ATGTGTG	330.01	PASS	AB=0.977;AC=15;AF=0.288;AN=52;BaseQRankSum=0.652;DP=695;FS=43.303;HRun=0;HaplotypeScore=176.8470;InbreedingCoeff=0.0440;MQ=63.74;MQ0=16;MQRankSum=0.030;QD=0.94;ReadPosRankSum=3.065;VQSLOD=1.1439;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:6.82:0,7,30	0/0:9,0:9:3.01:0,3,60	./.	./.	0/0:15,0:15:14.67:0,15,188	0/1:29,0:27:11.09:11,0,124	0/0:35,0:34:1.54:0,2,257	0/1:32,0:31:0:0,0,0	0/1:27,0:26:11.97:12,0,68	0/0:15,0:21:8.43:0,8,91	0/0:15,0:16:6.02:0,6,74	0/1:24,0:24:19.86:20,0,375	1/1:18,0:18:9.49:113,9,0	0/0:23,0:23:19.06:0,19,397	0/0:30,0:30:47.80:0,48,702	0/0:22,0:22:36:0,36,593	0/0:31,0:31:20.20:0,20,416	0/1:23,0:31:18.16:73,0,18	0/0:27,0:25:2.45:0,2,213	0/1:21,0:21:3.79:4,0,247	0/1:71,0:70:13.09:13,0,386	0/0:15,0:15:9.49:0,9,144	1/1:13,1:17:5.86:129,6,0	1/1:19,8:31:2.94:38,3,0	0/0:15,0:15:24.07:0,24,390	0/1:30,0:29:49.18:49,0,73	0/1:17,0:16:9.58:10,0,187	0/0:10,0:9:0.77:0,1,20
chr10	71100619	.	GTGTGTA	G	173.33	PASS	AB=0.932;AC=5;AF=0.089;AN=56;BaseQRankSum=4.889;DP=726;FS=47.144;HRun=0;HaplotypeScore=152.6616;InbreedingCoeff=-0.1059;MQ=49.77;MQ0=31;MQRankSum=-1.265;QD=1.31;ReadPosRankSum=-1.685;VQSLOD=0.9617;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:41:27.76:28,0,394	0/0:8,0:8:14.99:0,15,205	0/0:50,0:12:23.14:0,23,228	0/0:55,0:16:26.90:0,27,230	0/0:17,0:17:12.05:0,12,559	0/0:31,0:29:71.46:0,71,917	0/0:31,0:30:41.01:0,41,870	0/0:17,0:16:43.49:0,43,307	0/0:18,0:16:29.86:0,30,461	0/1:22,1:22:99:151,0,225	0/1:8,6:14:84.13:84,0,119	0/0:24,0:23:50.75:0,51,995	0/0:18,0:18:32.03:0,32,344	0/0:30,0:30:53.84:0,54,1061	0/0:28,0:28:67.25:0,67,1522	0/0:25,0:24:69.01:0,69,1491	0/1:31,0:31:13.58:14,0,814	0/0:24,0:23:29.95:0,30,411	0/0:20,0:15:38.90:0,39,606	0/1:21,0:19:11.68:12,0,743	0/0:50,0:47:72.83:0,73,1553	0/0:20,0:20:45.02:0,45,771	0/0:20,0:19:31.24:0,31,326	0/0:38,0:37:37.32:0,37,411	0/0:18,0:18:36.06:0,36,679	0/0:25,0:25:13.65:0,14,1199	0/0:18,0:17:4.90:0,5,601	0/0:9,0:8:10.42:0,10,233
chr10	71100642	.	GT	G	792.57	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.309;DP=675;FS=0.714;HRun=7;HaplotypeScore=88.1655;InbreedingCoeff=0.9425;MQ=56.08;MQ0=14;MQRankSum=-0.069;QD=18.01;ReadPosRankSum=1.574;VQSLOD=3.4273;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,39:44:87.17:887,87,0	0/0:8,0:8:24.08:0,24,302	0/0:53,1:21:50.96:0,51,637	0/0:50,1:18:36.06:0,36,407	0/0:19,0:19:54.16:0,54,656	0/0:26,0:26:75.24:0,75,943	0/0:18,0:17:48.14:0,48,592	0/0:17,0:17:48.07:0,48,573	0/0:17,0:16:45.14:0,45,566	0/0:26,0:25:69.20:0,69,844	0/0:15,0:15:35.96:0,36,435	0/0:23,0:23:62.78:0,63,746	0/0:17,0:17:48.14:0,48,587	0/0:26,0:26:72.23:0,72,904	0/0:25,0:25:69.80:0,70,834	0/0:31,0:30:84.27:0,84,1056	0/0:30,0:30:89.99:0,90,1080	0/0:19,0:19:39.09:0,39,469	0/0:20,0:19:50.92:0,51,580	0/0:22,0:22:66.20:0,66,815	0/0:25,0:24:50.36:0,50,596	0/0:21,0:21:60.18:0,60,748	0/0:22,0:21:47.35:0,47,581	0/0:36,0:36:82.86:0,83,946	0/0:14,0:14:28.90:0,29,344	0/0:24,0:23:53.73:0,54,661	0/0:20,0:20:50.81:0,51,598	0/0:3,0:3:9.03:0,9,113
chr10	71101362	.	G	GA	1719.25	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.243;DP=805;FS=10.769;HRun=2;HaplotypeScore=80.1920;InbreedingCoeff=0.9990;MQ=83.77;MQ0=0;MQRankSum=-3.863;QD=35.82;ReadPosRankSum=0.620;VQSLOD=3.5040;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,48:48:99:1814,126,0	0/0:11,0:11:33.10:0,33,409	0/0:26,0:26:47.41:0,47,768	0/0:20,0:20:53.95:0,54,622	0/0:21,0:21:63.18:0,63,767	0/0:25,0:24:75.16:0,75,900	0/0:35,0:35:96.30:0,96,1190	0/0:30,0:30:81.23:0,81,975	0/0:21,0:21:60.19:0,60,743	0/0:29,0:29:84.26:0,84,1041	0/0:18,0:18:50.99:0,51,608	0/0:40,0:40:99:0,114,1398	0/0:37,0:37:99:0,111,1347	0/0:27,0:27:78.24:0,78,967	0/0:38,0:38:99:0,105,1239	0/0:36,0:36:99:0,105,1289	0/0:28,0:28:81.24:0,81,991	0/0:32,0:32:93.29:0,93,1153	0/0:26,0:26:66.13:0,66,768	0/0:22,0:22:66.19:0,66,805	0/0:73,0:73:99:0,205,2471	0/0:28,0:28:84.25:0,84,1028	0/0:11,0:11:33.10:0,33,409	0/0:31,0:31:87.26:0,87,1066	0/0:20,0:20:51.13:0,51,606	0/0:39,0:39:99:0,108,1339	0/0:23,0:23:66.17:0,66,791	0/0:10,0:10:30.09:0,30,372
chr10	71101755	.	ACACGGT	A	1886.44	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.304;DP=755;FS=0.685;HRun=0;HaplotypeScore=156.0661;InbreedingCoeff=0.9952;MQ=79.86;MQ0=0;MQRankSum=-8.817;QD=41.01;ReadPosRankSum=-0.401;VQSLOD=3.5225;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,38:46:90.69:1981,91,0	0/0:8,0:8:24.06:0,24,762	0/0:23,0:23:25.11:0,25,1713	0/0:16,0:16:42.07:0,42,1101	0/0:20,0:20:60.18:0,60,2033	0/0:28,0:28:78.25:0,78,2491	0/0:27,0:27:78.27:0,78,2788	0/0:35,0:35:93.32:0,93,3312	0/0:32,0:32:96.33:0,96,3232	0/0:24,0:24:72.25:0,72,2575	0/0:12,0:12:30.10:0,30,1061	0/0:46,0:46:99:0,138,4890	0/0:29,0:29:87.30:0,87,3006	0/0:24,0:24:69.24:0,69,2387	0/0:35,0:35:99:0,99,3485	0/0:28,0:28:81.28:0,81,2814	0/0:31,0:31:93.32:0,93,3324	0/0:27,0:27:78.24:0,78,2691	0/0:25,0:25:75.24:0,75,2549	0/0:12,0:12:36.12:0,36,1293	0/0:56,0:56:99:0,163,5560	0/0:19,0:19:51.16:0,51,1747	0/0:11,0:11:33.11:0,33,1187	0/0:39,0:39:99:0,111,3912	0/0:20,0:20:60.21:0,60,2153	0/0:30,0:30:87.30:0,87,3070	0/0:41,0:40:99:0,117,4186	0/0:11,0:11:33.08:0,33,1086
chr10	71102148	.	GCCTGCCTTGGCC	G	1210.48	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.336;DP=544;FS=20.933;HRun=0;HaplotypeScore=173.2289;InbreedingCoeff=0.9515;MQ=64.43;MQ0=11;MQRankSum=-5.462;QD=60.52;ReadPosRankSum=1.398;VQSLOD=1.9644;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:33.11:1305,33,0	0/0:4,0:4:12.01:0,12,264	0/0:18,0:6:18.06:0,18,856	0/0:21,0:12:36.12:0,36,1859	0/0:21,0:21:60.21:0,60,3165	0/0:25,0:25:75.26:0,75,4616	0/0:17,0:17:51.18:0,51,3216	0/0:24,0:22:66.20:0,66,3623	0/0:14,0:14:42.14:0,42,2516	0/0:12,0:12:36.12:0,36,2019	0/0:11,0:11:30.10:0,30,1649	0/0:18,0:18:54.19:0,54,3070	0/0:11,0:11:33.11:0,33,1956	0/0:18,0:18:54.19:0,54,3143	0/0:26,0:26:78.27:0,78,4793	0/0:22,0:22:66.21:0,66,3747	0/0:33,0:33:96.33:0,96,5479	0/0:36,0:36:99:0,108,6630	0/0:25,0:24:69.24:0,69,3907	0/0:11,0:11:30.05:0,30,1481	0/0:46,0:45:99:0,135,8295	0/0:10,0:9:24.07:0,24,1206	0/0:6,0:6:18.06:0,18,999	0/0:26,0:26:78.27:0,78,4754	0/0:11,0:11:33.11:0,33,1782	0/0:19,0:19:57.16:0,57,3020	0/0:23,0:23:66.23:0,66,4037	0/0:16,0:16:48.16:0,48,2630
chr10	71103649	.	C	CA	890.06	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=-5.442;DP=422;FS=5.268;HRun=5;HaplotypeScore=51.3393;InbreedingCoeff=0.7962;MQ=66.45;MQ0=0;MQRankSum=-0.541;QD=29.67;ReadPosRankSum=-0.490;VQSLOD=3.8495;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:99:0,108,1161	0/0:1,0:1:3.01:0,3,32	0/0:6,1:5:5.65:0,6,54	0/0:8,0:6:14.97:0,15,136	0/0:6,0:6:12.03:0,12,129	0/0:24,0:23:60.14:0,60,645	0/0:14,0:14:36.09:0,36,387	0/0:36,0:36:78.19:0,78,838	0/0:14,0:14:33.08:0,33,355	0/0:16,0:16:42.11:0,42,451	0/0:6,0:6:15.04:0,15,161	0/0:17,0:17:42.07:0,42,451	1/1:1,10:11:30.10:394,30,0	0/0:15,0:15:42.10:0,42,451	0/0:26,0:26:57.13:0,57,605	0/0:18,0:18:51.11:0,51,540	0/0:30,0:30:78.14:0,78,818	0/0:25,0:25:69.17:0,69,742	0/0:24,0:24:53.55:0,54,559	0/0:1,0:1:3.01:0,3,32	0/0:12,0:12:24.06:0,24,258	./.	1/1:0,3:3:9.03:118,9,0	1/1:3,13:16:39.13:512,39,0	0/0:5,0:5:9.01:0,9,89	0/0:18,0:18:45.11:0,45,484	0/0:21,0:20:60.15:0,60,645	0/0:6,0:6:18.05:0,18,193
chr10	71104207	.	T	TA	1617.96	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.174;DP=570;FS=14.124;HRun=11;HaplotypeScore=68.8164;InbreedingCoeff=0.9516;MQ=73.37;MQ0=0;MQRankSum=-1.129;QD=18.81;ReadPosRankSum=3.367;VQSLOD=3.6656;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,35:41:69.91:880,70,0	0/0:10,0:10:23.88:0,24,186	0/0:17,0:14:8.13:0,8,82	0/0:13,0:11:11.64:0,12,74	0/0:26,0:27:61.72:0,62,461	0/0:32,0:33:91.68:0,92,700	0/0:15,0:17:36.94:0,37,267	0/0:32,0:32:55.25:0,55,578	0/0:14,0:14:26.87:0,27,206	0/0:23,0:23:53.73:0,54,415	0/0:16,0:16:35.84:0,36,277	0/0:18,0:18:44.76:0,45,340	1/1:1,7:8:18.04:183,18,0	0/0:17,0:20:48.57:0,49,346	0/0:23,0:24:55.76:0,56,419	0/0:35,0:35:92.63:0,93,718	0/0:19,0:19:43.86:0,44,331	0/0:14,0:14:32.54:0,33,245	0/0:22,0:23:52.80:0,53,399	0/0:19,0:19:44.79:0,45,345	0/0:14,0:14:29.88:0,30,232	0/0:20,0:21:37.82:0,38,282	1/1:3,10:13:21.01:203,21,0	1/1:5,19:24:51.09:511,51,0	0/0:19,0:21:54.78:0,55,397	0/0:29,0:29:68.69:0,69,531	0/0:22,0:22:50.55:0,51,381	0/0:3,0:3:8.97:0,9,70
chr10	71104737	.	AT	A	3984.93	PASS	AC=48;AF=1.000;AN=48;DP=336;FS=0.000;HRun=1;HaplotypeScore=15.1349;InbreedingCoeff=-0.0577;MQ=33.68;MQ0=2;QD=12.41;VQSLOD=1.8138;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:6:6.02:84,6,0	1/1:0,6:6:12.04:168,12,0	./.	./.	1/1:0,16:6:12.04:168,12,0	1/1:0,12:3:6.02:84,6,0	./.	1/1:0,15:1:2.97:20,3,0	1/1:0,21:9:24.08:336,24,0	1/1:1,15:4:9.03:126,9,0	./.	1/1:0,17:6:12.04:168,12,0	1/1:2,17:6:18.04:233,18,0	1/1:0,13:4:9.03:126,9,0	1/1:0,19:7:21.07:294,21,0	1/1:0,23:13:27.09:377,27,0	1/1:1,7:5:3.01:42,3,0	1/1:0,9:8:21.07:293,21,0	1/1:0,7:3:6.02:84,6,0	1/1:0,11:4:3.01:42,3,0	1/1:0,6:5:9.03:126,9,0	1/1:0,12:5:9.03:126,9,0	1/1:0,16:2:6.02:84,6,0	1/1:0,11:8:15.05:209,15,0	1/1:0,11:3:9.03:126,9,0	1/1:0,12:3:9.03:126,9,0	1/1:0,7:3:9.03:126,9,0	1/1:0,14:10:30.10:419,30,0
chr10	71106740	.	CT	C	4635.97	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.119;DP=678;FS=0.368;HRun=1;HaplotypeScore=70.9485;InbreedingCoeff=0.9507;MQ=78.83;MQ0=0;MQRankSum=2.379;QD=36.79;ReadPosRankSum=-0.625;VQSLOD=4.8477;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,159,2476	0/0:9,0:8:24.08:0,24,380	0/0:16,0:16:36.41:0,36,487	0/0:16,0:16:10.12:0,10,326	0/0:21,0:21:54.17:0,54,829	0/0:24,0:24:72.15:0,72,1062	0/0:21,0:21:63.21:0,63,1006	0/0:38,0:38:99:0,111,1686	0/0:24,0:24:72.21:0,72,1098	1/1:0,31:31:90.27:1203,90,0	1/1:0,18:18:44.74:505,45,0	0/0:37,0:37:99:0,111,1723	1/1:0,26:26:69.23:963,69,0	0/0:20,0:20:60.17:0,60,911	0/0:31,0:31:93.32:0,93,1485	0/0:16,0:16:48.16:0,48,767	0/0:34,0:34:99:0,102,1594	0/0:29,0:29:87.26:0,87,1363	0/0:20,0:20:60.19:0,60,920	0/0:11,0:11:27.09:0,27,429	0/0:39,0:39:99:0,117,1816	0/0:18,0:18:51.14:0,51,767	1/1:0,15:15:45.02:581,45,0	1/1:0,36:36:99:1383,99,0	0/0:21,0:21:63.12:0,63,919	0/0:15,1:16:3.20:0,3,629	0/0:19,0:18:57.17:0,57,861	0/0:16,0:16:48.15:0,48,741
chr10	71107650	.	AACACACACAC	A	382.86	PASS	AB=0.666;AC=7;AF=0.130;AN=54;BaseQRankSum=3.243;DP=579;FS=1.610;HRun=0;HaplotypeScore=158.2307;InbreedingCoeff=0.4214;MQ=65.84;MQ0=10;MQRankSum=-4.330;QD=3.30;ReadPosRankSum=-0.249;VQSLOD=2.8702;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:47:6.02:0,6,145	0/0:5,0:6:12.04:0,12,389	0/0:41,0:19:6.01:0,6,69	0/0:34,0:19:0:0,0,0	0/0:13,0:15:9.03:0,9,297	0/0:14,0:14:23.79:0,24,573	0/0:26,0:25:33.08:0,33,1078	0/0:23,0:23:38.89:0,39,646	0/0:13,0:13:21.07:0,21,710	0/0:18,0:18:33.02:0,33,465	./.	0/0:9,0:10:15.02:0,15,229	0/1:7,5:12:18.91:83,0,19	0/0:18,0:20:24.05:0,24,787	0/0:11,0:12:21.07:0,21,831	0/0:12,0:12:24.06:0,24,793	0/0:37,0:39:64.44:0,64,2202	1/1:16,7:23:10.85:222,11,0	0/0:14,0:14:15.05:0,15,427	0/0:6,0:6:9.03:0,9,329	0/0:50,0:54:93.94:0,94,2744	0/0:13,0:13:24.07:0,24,539	0/1:2,8:10:0:0,0,0	1/1:24,21:46:2.19:86,2,0	0/0:19,0:19:33.10:0,33,1093	0/1:16,1:25:99:109,0,291	0/0:13,0:13:21.05:0,21,658	0/0:2,0:4:2.68:0,3,11
chr10	71108227	.	AT	A	742.87	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.947;DP=459;FS=3.524;HRun=9;HaplotypeScore=46.3714;InbreedingCoeff=0.9568;MQ=68.28;MQ0=0;MQRankSum=-1.126;QD=20.64;ReadPosRankSum=-0.334;VQSLOD=3.8593;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.16:0,54,620	0/0:16,0:16:48.13:0,48,544	0/0:5,0:5:9.03:0,9,104	0/0:6,0:6:15:0,15,150	0/0:38,0:38:99:0,108,1243	0/0:24,0:24:63.19:0,63,727	0/0:8,0:8:24.07:0,24,277	0/0:30,0:30:75.21:0,75,857	0/0:17,0:17:42.12:0,42,485	1/1:3,21:24:63.01:571,63,0	1/1:0,12:12:32.97:294,33,0	0/0:17,0:17:51.14:0,51,579	0/0:0,0:9:25.57:0,26,130	0/0:15,0:15:45.13:0,45,519	0/0:9,0:9:24.07:0,24,277	0/0:11,0:11:33.09:0,33,372	0/0:18,0:18:36.11:0,36,415	0/0:16,0:16:45.03:0,45,500	0/0:8,0:8:24:0,24,249	0/0:25,0:25:72.18:0,72,814	0/0:9,0:9:27.07:0,27,302	0/0:9,0:9:24.07:0,24,277	0/0:3,0:13:28.41:0,28,144	0/0:0,0:11:28.41:0,28,144	0/0:21,0:21:63.18:0,63,718	0/0:21,0:21:51.13:0,51,573	0/0:24,0:24:69.21:0,69,796	0/0:23,0:23:69.07:0,69,776
chr10	71110968	.	T	TCA	1071.56	PASS	AB=0.776;AC=19;AF=0.380;AN=50;BaseQRankSum=-0.807;DP=530;FS=0.000;HRun=0;HaplotypeScore=77.1507;InbreedingCoeff=0.5620;MQ=57.78;MQ0=7;MQRankSum=-2.247;QD=5.08;ReadPosRankSum=-1.595;VQSLOD=2.4411;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:5,0:5:9.02:0,9,96	./.	./.	0/0:16,0:15:6.01:0,6,64	0/0:17,0:20:11.83:0,12,94	0/0:20,0:21:14.84:0,15,142	1/1:31,0:31:2.97:20,3,0	1/1:17,0:21:14.74:116,15,0	1/1:16,6:22:21.03:261,21,0	1/1:10,0:10:9.02:112,9,0	0/0:19,0:19:26.90:0,27,270	0/1:8,7:16:45.90:157,0,46	0/0:18,0:18:20.88:0,21,223	0/0:26,0:25:24.06:0,24,256	0/0:17,0:18:26.90:0,27,269	0/0:25,0:24:32.58:0,33,312	1/1:13,0:15:6.47:53,6,0	0/0:15,0:14:3:0,3,27	0/0:20,0:20:15.02:0,15,151	0/0:28,0:28:5.99:0,6,49	0/0:11,0:19:17.21:0,17,102	0/1:6,4:10:25.90:38,0,26	1/1:18,13:32:19.51:345,20,0	0/0:14,0:15:8.84:0,9,71	1/1:21,1:22:11.93:94,12,0	0/1:17,1:18:26.22:26,0,108	1/1:9,1:11:3.47:27,3,0
chr10	71111064	.	C	CAGCTTGTTGTGAGCT	4493.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.077;DP=690;FS=18.207;HRun=0;HaplotypeScore=262.1450;InbreedingCoeff=0.9662;MQ=64.38;MQ0=5;MQRankSum=-7.416;QD=140.43;ReadPosRankSum=-0.271;VQSLOD=3.5587;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,17:32:63.22:4494,63,0	0/0:4,0:4:12.04:0,12,472	0/0:32,0:21:59.99:0,60,1893	0/0:33,0:27:74.98:0,75,2372	0/0:28,0:28:78.20:0,78,2834	0/0:27,0:27:81.27:0,81,3290	0/0:33,0:33:96.31:0,96,3807	0/0:28,0:28:75.22:0,75,2688	0/0:24,0:24:66.21:0,66,2718	0/0:23,0:23:69.23:0,69,2730	0/0:20,0:20:57.18:0,57,2484	0/0:23,0:23:66.23:0,66,2685	0/0:12,0:12:36.12:0,36,1441	0/0:24,0:24:66.23:0,66,2757	0/0:34,0:34:99:0,102,4361	0/0:29,0:29:87.28:0,87,3499	0/0:30,0:30:90.30:0,90,3533	0/0:12,0:12:36.08:0,36,1443	0/0:16,0:16:45.10:0,45,1342	0/0:23,0:23:66.21:0,66,2335	0/0:51,0:51:99:0,148,5880	0/0:24,0:24:72.25:0,72,2927	0/0:15,0:15:45.15:0,45,1904	0/0:33,0:32:99:0,99,4086	0/0:14,0:14:39.05:0,39,1657	0/0:28,0:28:84.28:0,84,3392	0/0:30,0:30:90.31:0,90,3809	0/0:8,0:8:21.06:0,21,830
chr10	71111177	.	GATCTACT	G	2478.29	PASS	AB=0.923;AC=5;AF=0.089;AN=56;BaseQRankSum=9.216;DP=737;FS=0.000;HRun=0;HaplotypeScore=167.1924;InbreedingCoeff=0.7442;MQ=88.10;MQ0=0;MQRankSum=-9.073;QD=31.77;ReadPosRankSum=1.669;VQSLOD=3.3776;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,114,4425	0/0:2,0:2:6.02:0,6,242	0/0:28,0:28:81.28:0,81,2950	0/0:32,0:32:87.39:0,87,2919	0/0:31,0:31:84.29:0,84,3393	0/0:21,0:21:60.21:0,60,2408	0/0:24,0:24:69.24:0,69,2690	0/0:22,0:22:66.22:0,66,2427	0/0:25,0:25:75.26:0,75,2916	1/1:4,21:25:63.22:1621,63,0	1/1:1,16:17:33.11:858,33,0	0/0:23,0:23:66.23:0,66,2651	0/0:26,0:26:75.26:0,75,2949	0/0:30,0:30:90.31:0,90,3622	0/0:32,0:32:96.33:0,96,3798	0/0:33,0:33:99:0,99,3985	0/0:41,0:41:99:0,120,4493	0/0:25,0:25:69.19:0,69,2625	0/0:20,0:20:57.20:0,57,2304	0/0:27,0:27:69.22:0,69,2666	0/0:42,0:42:99:0,126,5017	0/0:20,0:20:60.21:0,60,2338	0/0:26,0:26:72.25:0,72,2860	0/0:24,0:24:69.22:0,69,2570	0/0:24,0:24:72.25:0,72,2743	0/1:33,3:36:99:129,0,3885	0/0:31,0:31:93.32:0,93,3686	0/0:7,0:7:21.07:0,21,847
chr10	71111429	.	T	TATTG	1646.78	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.774;DP=715;FS=8.626;HRun=0;HaplotypeScore=117.0031;InbreedingCoeff=0.9768;MQ=86.91;MQ0=0;MQRankSum=-2.498;QD=51.46;ReadPosRankSum=2.186;VQSLOD=4.7678;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:63.21:1742,63,0	0/0:5,0:5:15.05:0,15,313	0/0:33,0:34:96.14:0,96,1621	0/0:26,0:26:46.49:0,46,1116	0/0:33,0:33:96.26:0,96,1824	0/0:25,0:25:72.23:0,72,1449	0/0:24,0:24:69.17:0,69,1256	0/0:35,0:35:99:0,105,1809	0/0:30,0:30:90.22:0,90,1681	0/0:27,0:27:81.24:0,81,1650	0/0:18,0:18:54.17:0,54,1060	0/0:35,0:35:99:0,105,2143	0/0:25,0:25:72.23:0,72,1425	0/0:20,0:20:57.13:0,57,1022	0/0:33,0:33:93.28:0,93,1820	0/0:26,0:26:78.25:0,78,1582	0/0:17,0:17:51.14:0,51,1026	0/0:27,0:27:78.25:0,78,1569	0/0:27,0:27:78.23:0,78,1424	0/0:28,0:28:81.28:0,81,1651	0/0:31,0:31:90.26:0,90,1702	0/0:19,0:19:54.19:0,54,1131	0/0:18,0:18:48.13:0,48,898	0/0:25,0:24:72.17:0,72,1303	0/0:31,0:31:90.09:0,90,1610	0/0:36,0:36:99:0,105,1952	0/0:21,0:20:63.19:0,63,1264	0/0:6,0:6:18.04:0,18,263
chr10	71112042	.	A	AC	967.91	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.642;DP=665;FS=0.749;HRun=1;HaplotypeScore=64.1673;InbreedingCoeff=0.9975;MQ=78.08;MQ0=0;MQRankSum=-3.913;QD=33.38;ReadPosRankSum=1.226;VQSLOD=3.4137;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:75.25:1063,75,0	0/0:12,0:12:36.12:0,36,500	0/0:32,0:30:77.61:0,78,1067	0/0:17,0:17:51.01:0,51,622	0/0:33,0:33:99:0,99,1365	0/0:28,0:28:84.28:0,84,1174	0/0:12,0:12:36.11:0,36,486	0/0:28,0:28:81.27:0,81,1118	0/0:20,0:20:57.19:0,57,795	0/0:33,0:33:99:0,99,1367	0/0:26,0:26:78.17:0,78,1059	0/0:22,0:22:66.21:0,66,903	0/0:30,0:30:87.28:0,87,1201	0/0:27,0:27:78.25:0,78,1073	0/0:24,0:24:72.23:0,72,989	0/0:25,0:24:72.24:0,72,1006	0/0:30,0:30:90.30:0,90,1257	0/0:21,0:21:60.18:0,60,839	0/0:21,0:21:60.18:0,60,797	0/0:31,0:31:90.30:0,90,1255	0/0:19,0:19:57.16:0,57,762	0/0:16,0:16:48.16:0,48,671	0/0:22,0:22:63.19:0,63,845	0/0:11,0:11:33.10:0,33,445	0/0:22,0:22:66.22:0,66,921	0/0:35,0:35:99:0,105,1436	0/0:31,0:30:93.31:0,93,1298	0/0:8,0:8:24.06:0,24,303
chr10	71112324	.	TCA	T	812.21	PASS	AB=0.859;AC=13;AF=0.250;AN=52;BaseQRankSum=7.918;DP=630;FS=1.248;HRun=0;HaplotypeScore=98.0383;InbreedingCoeff=0.1243;MQ=57.36;MQ0=10;MQRankSum=-1.098;QD=3.76;ReadPosRankSum=0.732;VQSLOD=2.3263;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:3.58:0,4,60	0/1:4,4:8:32.77:59,0,33	./.	./.	0/0:19,0:19:30.09:0,30,420	0/0:14,0:14:15:0,15,197	0/1:22,3:25:62.24:62,0,413	0/0:18,0:18:15.03:0,15,186	0/1:15,1:16:16.07:16,0,191	0/0:21,0:21:23.37:0,23,179	0/0:18,0:18:5.09:0,5,58	0/0:18,0:18:12.31:0,12,395	0/0:18,0:18:2.97:0,3,20	0/0:15,0:14:30.10:0,30,456	0/0:21,0:21:42.10:0,42,579	0/0:34,1:36:24.29:0,24,934	0/1:26,3:28:28.19:28,0,456	1/1:10,23:36:41.10:563,41,0	0/0:20,0:20:24.08:0,24,358	0/1:22,5:28:47.25:47,0,518	0/1:28,2:31:7.28:7,0,699	0/1:14,4:18:52.52:53,0,122	0/0:8,0:19:9:0,9,77	0/0:18,0:33:6.01:0,6,70	0/0:15,0:16:17.42:0,17,428	1/1:9,0:22:5.53:113,6,0	0/0:24,3:27:8.30:0,8,505	1/1:1,0:2:2.84:14,3,0
chr10	71112546	.	T	TA	1159.94	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=5.706;DP=651;FS=0.561;HRun=10;HaplotypeScore=76.6752;InbreedingCoeff=0.7414;MQ=73.54;MQ0=0;MQRankSum=-0.109;QD=16.11;ReadPosRankSum=-1.265;VQSLOD=3.6920;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:29:31.78:0,32,93	0/0:11,0:11:23.96:0,24,197	0/1:13,0:11:21.09:21,0,72	0/0:12,0:13:7.46:0,7,119	0/0:25,0:26:67.23:0,67,546	0/0:18,0:19:43.95:0,44,344	0/0:21,0:21:53.89:0,54,437	0/0:35,0:35:79.47:0,79,625	0/0:20,0:22:49:0,49,381	0/0:23,0:23:53.89:0,54,442	0/0:14,0:14:35.88:0,36,283	0/0:27,0:27:62.90:0,63,517	0/0:29,0:31:72.95:0,73,576	0/0:17,0:18:11.24:0,11,305	0/0:35,0:35:74.84:0,75,611	0/0:28,0:28:68.87:0,69,561	0/0:33,0:35:91.88:0,92,738	0/0:17,0:17:44.90:0,45,364	0/0:19,1:21:23.94:0,24,385	0/0:29,0:29:53.83:0,54,436	0/0:17,0:17:44.93:0,45,369	0/0:19,0:19:41.38:0,41,323	0/0:15,0:15:38.95:0,39,320	0/0:18,0:19:46.98:0,47,375	0/0:23,0:24:61.94:0,62,499	1/1:8,36:44:90.20:949,90,0	0/0:31,0:30:80.84:0,81,658	1/1:6,9:15:30.07:319,30,0
chr10	71112943	.	GGT	G	506.91	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.056;DP=542;FS=4.709;HRun=0;HaplotypeScore=65.1582;InbreedingCoeff=0.9447;MQ=73.12;MQ0=0;MQRankSum=-2.466;QD=28.16;ReadPosRankSum=-3.796;VQSLOD=3.5491;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,9:18:53.98:602,54,0	0/0:3,0:3:9.03:0,9,147	0/0:17,0:16:41.80:0,42,525	0/0:13,0:13:31.78:0,32,357	0/0:16,0:16:48.15:0,48,793	0/0:14,0:14:39.10:0,39,618	0/0:23,0:23:63.21:0,63,1065	0/0:26,0:26:75.23:0,75,1211	0/0:13,0:13:39.11:0,39,642	0/0:18,0:18:54.17:0,54,886	0/0:18,0:18:48.07:0,48,735	0/0:25,0:25:75.26:0,75,1284	0/0:21,0:21:60.20:0,60,1035	0/0:23,0:23:69.22:0,69,1163	0/0:17,0:17:51.14:0,51,787	0/0:21,0:21:63.19:0,63,1032	0/0:36,0:36:99:0,102,1692	0/0:19,0:19:57.10:0,57,893	0/0:14,0:14:39.10:0,39,591	0/0:27,0:27:78.25:0,78,1297	0/0:24,0:24:71.24:0,71,1119	0/0:18,0:18:54.14:0,54,848	0/0:14,0:14:42.14:0,42,709	0/0:23,0:23:63.16:0,63,1004	0/0:19,0:19:57.20:0,57,978	0/0:28,0:28:69.19:0,69,1136	0/0:17,0:17:48.05:0,48,752	0/0:17,0:17:45.15:0,45,777
chr10	71114812	.	ACACCCC	A	3492.50	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.412;DP=424;FS=20.166;HRun=0;HaplotypeScore=103.4193;InbreedingCoeff=0.9618;MQ=72.57;MQ0=1;MQRankSum=-9.639;QD=48.51;ReadPosRankSum=4.062;VQSLOD=1.9867;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:11:20.06:193,20,0	0/0:3,0:3:9.03:0,9,272	0/0:18,0:13:26.40:0,26,631	0/0:20,0:18:17.96:0,18,893	0/0:5,0:5:12.01:0,12,230	0/0:17,0:17:41.94:0,42,1110	0/0:17,0:16:48.04:0,48,1292	0/0:9,0:9:19.29:0,19,438	0/0:22,0:22:49.81:0,50,1293	1/1:2,6:9:27.02:501,27,0	1/1:1,7:9:20.95:328,21,0	0/0:22,0:22:56.22:0,56,1175	0/0:13,0:13:26.99:0,27,725	0/0:17,0:17:48.15:0,48,1376	0/0:18,0:18:48.11:0,48,1129	0/0:21,0:20:54.13:0,54,1355	0/0:24,0:24:63.20:0,63,1915	1/1:2,14:17:48.16:1009,48,0	0/0:13,0:13:32.99:0,33,719	0/0:13,0:13:39.11:0,39,980	0/0:43,0:43:99:0,114,2271	0/0:13,0:13:36.51:0,37,832	0/0:5,0:5:9.02:0,9,205	0/0:14,0:14:39.06:0,39,872	0/0:11,0:11:33.03:0,33,676	1/1:6,14:20:57.13:1121,57,0	0/0:12,0:12:33.10:0,33,1026	1/1:1,4:5:15.05:341,15,0
chr10	71114813	.	CA	C	1464.85	PASS	AB=0.944;AC=13;AF=0.232;AN=56;BaseQRankSum=10.753;DP=426;FS=44.682;HRun=1;HaplotypeScore=74.2262;InbreedingCoeff=0.7856;MQ=71.53;MQ0=1;MQRankSum=-8.660;QD=16.46;ReadPosRankSum=3.926;VQSLOD=1.3915;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,1:11:23.37:190,23,0	0/0:3,0:3:8.96:0,9,69	0/0:18,0:12:26.59:0,27,308	0/0:21,0:18:5.62:0,6,374	0/0:5,0:5:11.99:0,12,112	0/1:16,1:17:7.89:8,0,297	0/0:16,1:16:8.49:0,8,365	0/0:7,0:7:19.28:0,19,195	0/0:23,0:23:49.08:0,49,443	1/1:9,0:9:27:244,27,0	1/1:9,0:9:20.90:164,21,0	0/0:21,1:22:6.88:0,7,304	0/0:13,0:13:26.89:0,27,266	0/0:17,0:17:37.87:0,38,438	0/0:18,0:18:17.09:0,17,362	0/0:22,0:21:15.24:0,15,500	0/0:25,0:25:62.97:0,63,667	1/1:17,0:17:48:430,48,0	0/0:12,0:12:18.06:0,18,252	0/0:13,0:13:32.67:0,33,301	0/0:44,0:44:88.74:0,89,852	0/0:13,0:13:7.12:0,7,223	0/0:5,0:5:6.89:0,7,65	0/0:14,1:15:38.16:0,38,314	0/0:11,0:11:4.32:0,4,228	1/1:19,1:20:56.92:487,57,0	0/0:13,0:13:36.07:0,36,417	1/1:5,0:5:14.99:127,15,0
chr10	71114827	.	CA	C	2065.57	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.094;DP=425;FS=22.904;HRun=1;HaplotypeScore=75.4880;InbreedingCoeff=0.8976;MQ=78.41;MQ0=1;MQRankSum=-7.895;QD=27.91;ReadPosRankSum=4.714;VQSLOD=2.1973;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,7:9:15.05:193,15,0	0/0:1,0:1:3.01:0,3,47	0/0:23,0:17:32.77:0,33,537	0/0:27,0:25:23.74:0,24,678	0/0:8,0:8:24.02:0,24,288	0/0:18,0:18:40.91:0,41,553	0/0:26,0:25:57.12:0,57,806	0/0:7,0:7:18.06:0,18,288	0/0:27,0:27:59.43:0,59,829	1/1:1,11:12:13.05:346,13,0	1/1:1,11:12:21.07:266,21,0	0/0:22,0:22:45.83:0,46,679	0/0:11,0:11:2.55:0,3,13	0/0:15,0:15:42.08:0,42,545	0/0:13,0:13:36.10:0,36,525	0/0:17,0:16:45.12:0,45,629	0/0:28,0:28:81.18:0,81,1106	1/1:1,15:16:40.47:543,40,0	0/0:9,0:9:24.03:0,24,292	0/0:6,0:6:15.03:0,15,196	0/0:35,0:35:87.16:0,87,1128	0/0:12,0:12:30.08:0,30,425	0/0:4,0:4:8.87:0,9,88	0/0:10,0:10:12:0,12,70	0/0:13,0:13:33.04:0,33,410	1/1:1,18:19:56.94:667,57,0	0/0:18,0:18:41.98:0,42,568	1/1:1,5:6:18.06:233,18,0
chr10	71119593	.	CATT	C	2754.29	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.398;DP=767;FS=3.824;HRun=0;HaplotypeScore=107.6230;InbreedingCoeff=0.9930;MQ=75.09;MQ0=0;MQRankSum=-3.662;QD=38.79;ReadPosRankSum=0.523;VQSLOD=4.8215;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,144,3260	0/0:10,0:10:27.09:0,27,612	0/0:22,0:23:60.20:0,60,1192	0/0:7,0:7:15.01:0,15,259	0/0:23,0:23:63.22:0,63,1409	0/0:18,0:18:51.18:0,51,1156	0/0:32,0:32:96.33:0,96,2150	0/0:27,0:27:78.27:0,78,1770	0/0:34,0:34:99:0,102,2290	0/0:34,0:34:99:0,99,2244	0/0:25,0:25:63.21:0,63,1375	0/0:41,0:41:99:0,117,2651	1/1:1,33:34:87.30:1448,87,0	0/0:31,0:31:93.32:0,93,2102	0/0:38,0:38:99:0,108,2447	0/0:25,0:25:72.25:0,72,1632	0/0:33,0:33:99:0,99,2197	0/0:22,0:22:66.20:0,66,1450	0/0:21,0:21:60.18:0,60,1288	0/0:29,0:29:84.27:0,84,1838	0/0:68,0:68:99:0,196,4393	0/0:12,0:12:36.12:0,36,815	1/1:2,8:10:24.08:400,24,0	1/1:0,27:27:63.21:1049,63,0	0/0:27,0:27:78.27:0,78,1767	0/0:33,0:33:96.33:0,96,2144	0/0:22,0:22:63.22:0,63,1428	0/0:10,0:10:30.10:0,30,680
chr10	71120081	.	TGGC	T	79.36	PASS	AB=0.726;AC=2;AF=0.036;AN=56;BaseQRankSum=3.024;DP=502;FS=4.725;HRun=0;HaplotypeScore=72.7176;InbreedingCoeff=-0.0359;MQ=57.02;MQ0=9;MQRankSum=0.471;QD=6.10;ReadPosRankSum=-1.481;VQSLOD=1.6882;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:84.08:0,84,1984	0/0:7,0:7:18.06:0,18,439	0/1:1,1:2:27.98:50,0,28	0/1:8,3:10:99:118,0,370	0/0:26,0:26:69.18:0,69,1595	0/0:9,0:9:21:0,21,461	0/0:16,0:14:30.10:0,30,738	0/0:14,0:14:36.07:0,36,727	0/0:16,0:16:42.13:0,42,1030	0/0:19,0:19:57.20:0,57,1396	0/0:16,0:16:39.10:0,39,838	0/0:24,0:24:72.18:0,72,1717	0/0:12,0:12:36.12:0,36,864	0/0:13,0:13:39.13:0,39,959	0/0:19,0:19:57.18:0,57,1353	0/0:11,0:11:33.09:0,33,709	0/0:29,0:27:81.28:0,81,1955	0/0:27,0:26:72.05:0,72,1696	0/0:16,0:15:42.12:0,42,936	0/0:15,0:14:42.13:0,42,963	0/0:26,0:25:60.24:0,60,1384	0/0:23,0:23:57.20:0,57,1379	0/0:12,0:12:36.07:0,36,683	0/0:22,0:22:63.22:0,63,1519	0/0:16,0:16:48.16:0,48,1173	0/0:32,0:31:93.32:0,93,2212	0/0:20,0:20:60.21:0,60,1441	0/0:16,0:16:48.11:0,48,1124
chr10	71120146	.	C	CAA	1126.37	PASS	AB=0.940;AC=10;AF=0.179;AN=56;BaseQRankSum=2.175;DP=456;FS=9.458;HRun=12;HaplotypeScore=65.2811;InbreedingCoeff=0.6545;MQ=57.73;MQ0=10;MQRankSum=-1.198;QD=12.52;ReadPosRankSum=-1.723;VQSLOD=1.0631;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:71.84:0,72,655	1/1:5,0:4:3.01:42,3,0	0/0:22,0:7:7.11:0,7,56	0/1:11,0:6:18.48:18,0,41	0/0:21,0:23:35.05:0,35,289	0/0:9,0:11:23.44:0,23,190	0/0:10,0:11:29.51:0,30,243	0/0:33,0:33:65.12:0,65,562	0/0:10,0:12:23.69:0,24,255	1/1:3,7:10:21.06:272,21,0	1/1:5,8:14:22.94:219,23,0	0/0:13,0:14:23.95:0,24,269	0/0:5,0:5:9.01:0,9,83	0/0:5,0:6:11.66:0,12,95	0/0:9,0:9:14.70:0,15,186	0/0:11,0:12:23.69:0,24,201	0/0:30,0:31:56.41:0,56,621	1/1:8,17:24:51.13:691,51,0	0/0:6,0:5:8.95:0,9,83	0/0:17,0:19:32.45:0,32,297	0/0:12,0:14:26.28:0,26,203	0/0:13,0:13:23.94:0,24,222	0/0:13,0:14:23.85:0,24,269	0/0:16,0:17:32.46:0,32,347	0/0:13,0:14:35.73:0,36,317	0/1:18,2:22:42.45:42,0,322	0/0:25,0:27:50.47:0,50,549	0/0:10,0:9:14.70:0,15,123
chr10	71122495	.	GAA	G	317.68	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=3.874;DP=515;FS=15.387;HRun=8;HaplotypeScore=78.3227;InbreedingCoeff=0.5816;MQ=47.08;MQ0=33;MQRankSum=0.206;QD=15.13;ReadPosRankSum=-1.014;VQSLOD=0.1676;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:94.75:0,95,1485	0/0:8,0:8:12.21:0,12,143	0/0:9,0:2:5.22:0,5,32	./.	0/0:21,0:20:24.08:0,24,399	0/0:15,0:14:40.22:0,40,557	0/0:9,0:8:18.02:0,18,278	0/0:35,0:33:81.62:0,82,1288	0/0:11,0:11:26.22:0,26,329	0/0:11,0:10:12.33:0,12,137	0/0:13,0:12:21.58:0,22,219	0/0:23,0:21:45.42:0,45,686	0/0:22,0:19:40.91:0,41,628	0/0:14,0:14:30.05:0,30,438	0/0:13,0:13:33.03:0,33,495	0/0:12,0:11:30.10:0,30,507	0/0:38,0:37:85.40:0,85,1296	1/1:13,8:19:2.11:394,2,0	0/0:20,0:16:41.97:0,42,526	0/0:22,0:21:54.14:0,54,871	0/0:9,0:8:18.06:0,18,319	0/0:18,0:16:42.61:0,43,663	0/0:23,0:22:40.02:0,40,641	0/0:16,0:14:24.08:0,24,428	0/0:19,0:17:48.12:0,48,749	0/0:28,0:25:62.84:0,63,895	0/0:29,0:28:78.17:0,78,1175	0/0:6,0:6:12.03:0,12,184
chr10	71122506	.	AAG	A	506.64	PASS	AB=0.987;AC=8;AF=0.143;AN=56;BaseQRankSum=5.177;DP=518;FS=43.822;HRun=0;HaplotypeScore=78.5772;InbreedingCoeff=0.5948;MQ=49.60;MQ0=23;MQRankSum=-2.524;QD=5.57;ReadPosRankSum=-3.420;VQSLOD=0.2758;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:37,1:36:49.90:50,0,391	1/1:8,0:8:13.85:135,14,0	0/0:13,0:3:0.81:0,1,43	0/0:13,0:3:5.65:0,6,28	0/0:18,0:18:11.21:0,11,297	0/0:19,0:18:33.65:0,34,293	0/0:10,0:9:4.46:0,4,170	0/0:38,0:38:46.26:0,46,687	0/0:10,0:10:11.35:0,11,191	1/1:12,0:12:32.27:253,32,0	1/1:12,3:14:18.45:210,18,0	0/0:22,0:20:32.46:0,32,440	0/0:23,0:21:18.85:0,19,248	0/0:13,0:13:29.91:0,30,288	0/0:10,0:10:26.77:0,27,242	0/0:12,0:11:26.78:0,27,285	0/0:40,0:39:26.21:0,26,676	0/1:18,0:16:1.99:2,0,117	0/0:16,0:13:5.33:0,5,187	0/0:21,0:20:27.83:0,28,434	0/0:12,0:11:21.59:0,22,205	0/0:18,0:17:24.87:0,25,281	0/0:23,0:22:17.21:0,17,251	0/0:14,0:13:23.63:0,24,182	0/0:20,0:19:42.37:0,42,422	0/0:25,0:23:21.87:0,22,294	0/0:28,0:27:74.25:0,74,723	0/0:9,0:9:17.38:0,17,103
chr10	71124729	.	T	TA	2083.92	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-8.543;DP=554;FS=0.972;HRun=9;HaplotypeScore=53.9984;InbreedingCoeff=0.9345;MQ=79.01;MQ0=0;MQRankSum=-2.721;QD=22.17;ReadPosRankSum=1.178;VQSLOD=4.4424;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,17:25:2.40:479,2,0	1/1:2,4:6:12.03:133,12,0	0/0:14,0:14:20.34:0,20,240	0/0:14,0:15:23.83:0,24,189	0/0:22,0:22:47.97:0,48,417	0/0:29,0:29:68.97:0,69,597	0/0:24,0:24:60.42:0,60,514	0/0:28,0:28:32.81:0,33,511	0/0:12,0:12:32.98:0,33,282	1/1:4,23:27:69.19:763,69,0	1/1:6,15:21:45:467,45,0	0/0:19,0:19:50.96:0,51,439	0/0:15,0:15:41.99:0,42,365	0/0:20,0:20:53.95:0,54,461	0/0:15,0:15:38.98:0,39,339	0/0:19,0:19:50.95:0,51,436	0/0:32,0:32:86.93:0,87,742	1/1:2,13:15:16.06:405,16,0	0/0:17,0:17:47.97:0,48,413	0/0:13,0:13:32.97:0,33,282	0/0:25,0:25:68.96:0,69,592	0/0:10,0:10:29.99:0,30,260	0/0:16,0:16:32.96:0,33,286	0/0:21,0:21:59.98:0,60,521	0/0:23,0:23:62.91:0,63,537	0/0:5,0:21:32.58:0,33,96	0/0:39,0:38:99:0,117,1007	0/0:3,0:11:12.22:0,12,36
chr10	71125033	.	A	AAT	332.86	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.435;DP=312;FS=11.011;HRun=0;HaplotypeScore=44.2147;InbreedingCoeff=0.6910;MQ=62.88;MQ0=14;MQRankSum=-0.860;QD=19.58;ReadPosRankSum=-1.319;VQSLOD=2.2758;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:33.09:0,33,399	0/0:5,0:5:15.04:0,15,176	0/0:36,0:9:4.87:0,5,49	0/0:33,0:7:8.60:0,9,95	0/0:10,0:9:18.04:0,18,212	0/0:9,0:9:24.08:0,24,300	0/0:9,0:9:15.02:0,15,172	0/0:24,0:24:51.14:0,51,616	0/0:11,0:11:30.07:0,30,349	0/0:13,0:12:21.07:0,21,262	0/0:9,0:9:12.04:0,12,150	0/0:6,0:6:15.05:0,15,187	0/0:4,0:3:9.03:0,9,113	0/0:9,0:9:21.03:0,21,224	0/0:2,0:2:6.01:0,6,62	0/0:7,0:7:15.04:0,15,177	0/0:19,0:19:36.07:0,36,421	0/0:16,0:16:30.09:0,30,375	0/0:6,0:6:15.05:0,15,188	0/0:6,0:5:15.05:0,15,187	0/0:7,0:6:12.04:0,12,150	0/0:4,0:4:12.04:0,12,150	0/0:3,0:3:6.02:0,6,75	0/0:12,0:11:30:0,30,329	0/0:11,0:11:21.06:0,21,251	1/1:4,6:9:15.05:247,15,0	0/0:9,0:8:9.02:0,9,100	1/1:1,6:6:12.04:197,12,0
chr10	71126099	.	G	GATGT	3135.97	PASS	AB=0.974;AC=23;AF=0.460;AN=50;BaseQRankSum=-1.465;DP=897;FS=14.852;HRun=0;HaplotypeScore=155.1319;InbreedingCoeff=0.8274;MQ=66.64;MQ0=12;MQRankSum=-1.541;QD=8.88;ReadPosRankSum=-3.138;VQSLOD=1.2843;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,9:37:24.08:553,24,0	1/1:9,5:14:12.04:276,12,0	./.	./.	0/1:34,1:37:29.87:30,0,453	0/0:25,0:25:21.07:0,21,310	1/1:29,0:29:3.01:67,3,0	./.	0/0:38,0:38:36.11:0,36,520	1/1:28,1:37:26.80:411,27,0	1/1:15,1:23:7.58:125,8,0	0/0:27,0:28:27.05:0,27,345	0/0:41,0:41:42.09:0,42,584	1/1:20,8:29:24.08:540,24,0	0/0:36,0:38:51.13:0,51,691	0/0:33,0:33:36.09:0,36,488	0/0:35,0:36:27.07:0,27,388	0/0:17,0:22:13.83:0,14,116	1/1:28,2:30:6.02:138,6,0	0/0:29,0:29:30.10:0,30,441	0/0:43,0:45:54.09:0,54,688	0/0:33,0:33:45.09:0,45,587	1/1:18,10:29:18.06:414,18,0	1/1:28,0:28:18.01:280,18,0	0/0:35,0:35:30.08:0,30,408	1/1:39,0:42:38.82:432,39,0	0/0:27,0:27:27.09:0,27,405	1/1:13,0:17:3.90:67,4,0
chr10	71126561	.	T	TCAAA	3976.02	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.453;DP=771;FS=1.766;HRun=0;HaplotypeScore=130.4715;InbreedingCoeff=0.9940;MQ=61.45;MQ0=5;MQRankSum=-0.321;QD=40.99;ReadPosRankSum=1.403;VQSLOD=4.0811;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:43:87.96:0,88,806	0/0:14,0:14:36.12:0,36,557	0/0:41,0:24:17.94:0,18,232	0/0:40,0:34:33.10:0,33,480	0/0:17,0:17:24.08:0,24,388	0/0:29,0:29:60.20:0,60,969	0/0:28,0:28:54.18:0,54,854	0/0:52,0:52:81.26:0,81,1269	0/0:29,0:29:66.23:0,66,1064	0/0:24,0:24:39.13:0,39,630	0/0:23,0:23:48.16:0,48,776	0/0:29,0:29:60.20:0,60,969	1/1:5,16:21:42.14:1014,42,0	0/0:25,0:25:48.15:0,48,752	0/0:22,0:21:39.13:0,39,630	0/0:23,0:23:51.14:0,51,796	0/0:26,0:26:42.14:0,42,679	1/1:8,14:23:39.13:937,39,0	0/0:24,0:23:24.06:0,24,357	0/0:38,0:37:69.21:0,69,1065	0/0:31,0:31:60.16:0,60,897	0/0:36,0:38:72.24:0,72,1163	1/1:10,13:25:30.03:724,30,0	1/1:8,18:28:54.19:1300,54,0	0/0:19,0:19:48.15:0,48,753	0/0:24,0:24:56.38:0,56,835	0/0:28,0:27:60.17:0,60,912	0/0:7,0:7:18.02:0,18,220
chr10	71127474	.	CCATT	C	1538.98	PASS	AB=0.578;AC=5;AF=0.089;AN=56;BaseQRankSum=6.052;DP=721;FS=4.174;HRun=0;HaplotypeScore=124.6833;InbreedingCoeff=0.7369;MQ=65.29;MQ0=0;MQRankSum=1.016;QD=20.80;ReadPosRankSum=0.625;VQSLOD=3.5304;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:60.15:0,60,1331	0/0:7,0:16:27.04:0,27,410	0/0:23,0:21:6.02:0,6,126	0/0:16,0:14:15.05:0,15,332	0/0:31,0:31:42.14:0,42,959	0/0:29,0:29:72.25:0,72,1663	0/0:15,0:15:21.07:0,21,500	0/0:42,0:42:48.14:0,48,963	0/0:18,0:18:33.11:0,33,785	0/0:10,0:31:66.22:0,66,1148	0/0:5,0:14:29.07:0,29,417	0/0:31,0:31:60.20:0,60,1362	1/1:9,14:23:36.12:566,36,0	0/0:25,0:25:36.12:0,36,830	0/0:38,0:38:72.25:0,72,1686	0/0:26,0:26:57.20:0,57,1355	0/0:25,0:24:51.18:0,51,1211	0/0:8,0:25:45.14:0,45,777	0/0:21,0:21:21.07:0,21,500	0/0:29,0:29:42.14:0,42,933	0/0:19,0:19:39.13:0,39,923	0/0:31,0:31:66.23:0,66,1523	1/1:5,20:24:41.42:662,41,0	0/1:7,19:26:38.27:440,0,38	0/0:33,0:33:69.24:0,69,1568	0/0:15,0:26:54.18:0,54,1012	0/0:32,0:32:60.21:0,60,1426	0/0:12,0:25:27.09:0,27,449
chr10	71129887	.	GT	G	772.29	PASS	AB=0.900;AC=7;AF=0.125;AN=56;BaseQRankSum=4.061;DP=613;FS=5.009;HRun=11;HaplotypeScore=86.3638;InbreedingCoeff=0.7520;MQ=75.67;MQ0=5;MQRankSum=1.302;QD=11.03;ReadPosRankSum=-0.401;VQSLOD=3.1982;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:35.45:0,35,165	1/1:2,6:8:8.96:74,9,0	0/0:47,1:23:15.72:0,16,211	0/0:33,1:27:8.94:0,9,246	0/0:30,1:31:48.74:0,49,842	0/0:29,1:31:52.68:0,53,800	0/0:16,1:17:20.47:0,20,423	0/0:33,0:36:77.59:0,78,730	0/0:12,0:12:8.47:0,8,284	1/1:0,18:18:53.92:441,54,0	1/1:1,16:17:47.93:392,48,0	0/0:19,0:19:48.12:0,48,509	0/0:16,0:17:25.40:0,25,125	0/0:19,1:20:32.32:0,32,524	0/0:20,0:20:42.11:0,42,447	0/0:21,1:22:35.50:0,35,576	0/0:26,0:26:65.15:0,65,701	0/0:2,0:14:28.41:0,28,142	0/0:29,1:30:22.87:0,23,638	0/0:14,1:14:38.95:0,39,381	0/0:16,2:18:1.82:0,2,421	0/0:15,1:16:11.45:0,11,327	0/0:19,0:19:26.53:0,27,133	0/0:19,0:19:30.39:0,30,137	0/0:20,0:20:57.14:0,57,607	0/1:23,3:27:3.93:4,0,512	0/0:21,1:22:20.46:0,20,414	0/0:11,0:11:29.90:0,30,280
chr10	71129900	.	T	TTA	1413.22	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.530;DP=608;FS=0.584;HRun=0;HaplotypeScore=95.7768;InbreedingCoeff=0.9932;MQ=70.96;MQ0=5;MQRankSum=-1.142;QD=17.45;ReadPosRankSum=-0.096;VQSLOD=3.0347;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,14:24:19.77:443,20,0	0/0:9,0:9:24.08:0,24,365	0/0:51,0:23:30.44:0,30,391	0/0:31,0:24:45.65:0,46,523	0/0:34,0:34:96.27:0,96,1341	0/0:32,0:32:93.30:0,93,1380	0/0:17,0:17:51.15:0,51,721	0/0:33,0:32:70.78:0,71,1173	0/0:12,0:12:36.11:0,36,518	0/0:21,0:21:60.15:0,60,850	0/0:17,0:17:48.11:0,48,704	0/0:18,0:18:54.15:0,54,765	1/1:4,8:14:27.96:345,28,0	0/0:21,0:21:60.17:0,60,829	0/0:20,0:20:60.19:0,60,888	0/0:19,0:19:57.18:0,57,834	0/0:28,0:28:84.22:0,84,1181	0/0:14,0:14:32.46:0,32,152	0/0:25,0:25:69.20:0,69,969	0/0:13,0:12:36.11:0,36,526	0/0:18,0:18:54.18:0,54,808	0/0:14,0:14:42.12:0,42,585	1/1:4,14:22:15.38:279,15,0	1/1:3,16:21:33.08:504,33,0	0/0:20,0:20:60.20:0,60,908	0/0:28,0:28:75.21:0,75,1052	0/0:18,0:18:48.15:0,48,714	0/0:14,0:14:42.10:0,42,558
chr10	71130254	.	A	AAAT	1158.38	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=4.805;DP=456;FS=2.707;HRun=0;HaplotypeScore=77.8732;InbreedingCoeff=0.3928;MQ=72.23;MQ0=0;MQRankSum=-0.291;QD=9.73;ReadPosRankSum=0.506;VQSLOD=2.9003;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:13.75:136,0,14	0/0:9,0:9:15:0,15,169	0/0:9,0:9:12.15:0,12,233	0/1:9,0:8:20.18:20,0,114	0/0:24,0:24:66.21:0,66,1018	0/0:20,0:20:57.15:0,57,848	0/0:15,0:15:42.10:0,42,607	0/0:29,0:29:81.25:0,81,1224	0/0:10,0:10:30.10:0,30,459	0/1:18,0:18:23.79:24,0,308	0/1:23,0:23:23.48:23,0,445	0/0:16,0:16:42.14:0,42,638	1/1:10,0:9:8.72:71,9,0	0/0:14,0:14:42.14:0,42,649	0/0:21,0:21:60.20:0,60,906	0/0:7,0:7:15.05:0,15,252	0/0:24,0:24:72.24:0,72,1125	1/1:2,19:21:42.14:918,42,0	0/0:25,0:25:66.21:0,66,1003	0/0:26,0:26:72.19:0,72,1065	0/0:11,0:11:30.10:0,30,468	0/0:5,0:5:15.05:0,15,241	0/1:11,0:11:23.98:82,0,24	1/1:5,0:5:8.13:44,8,0	0/0:18,0:19:57.17:0,57,855	0/0:21,0:21:60.20:0,60,964	0/0:17,0:17:45.14:0,45,697	0/0:15,0:15:45.15:0,45,696
chr10	71130257	.	AT	A	2076.35	PASS	AB=0.889;AC=15;AF=0.268;AN=56;BaseQRankSum=10.159;DP=442;FS=2.798;HRun=1;HaplotypeScore=51.3051;InbreedingCoeff=0.8139;MQ=70.70;MQ0=0;MQRankSum=1.022;QD=20.36;ReadPosRankSum=0.081;VQSLOD=3.7193;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,2:21:44.15:299,44,0	1/1:0,7:7:15.05:210,15,0	0/0:9,0:9:11.09:0,11,201	0/1:7,1:6:9.56:10,0,108	0/0:24,0:24:72.18:0,72,966	0/0:18,0:18:54.15:0,54,727	0/0:13,0:13:39.09:0,39,502	0/0:29,0:29:87.23:0,87,1125	0/0:10,0:10:30.10:0,30,416	1/1:0,18:18:54.10:680,54,0	1/1:0,25:25:72.11:939,72,0	0/0:14,0:14:42.11:0,42,554	1/1:9,0:8:2.61:15,3,0	0/0:15,0:15:45.12:0,45,597	0/0:20,0:20:60.14:0,60,768	0/0:7,0:7:21.04:0,21,264	0/0:25,0:25:75.21:0,75,1011	0/0:20,0:20:42.03:0,42,382	0/0:23,0:23:69.19:0,69,907	0/0:23,0:23:69.19:0,69,927	0/0:10,0:10:30.10:0,30,418	0/0:6,0:6:18.03:0,18,221	1/1:8,1:9:0.85:61,1,0	1/1:5,0:5:8.34:43,8,0	0/0:21,0:21:55.38:0,55,785	0/0:22,0:22:66.20:0,66,902	0/0:16,0:16:48.11:0,48,623	0/0:15,0:15:45.15:0,45,625
chr10	71130807	.	GGGGGACA	G	1991.14	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.566;DP=672;FS=6.329;HRun=0;HaplotypeScore=154.3700;InbreedingCoeff=0.9996;MQ=87.36;MQ0=0;MQRankSum=-8.620;QD=55.31;ReadPosRankSum=0.221;VQSLOD=3.4128;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:78.22:2086,78,0	0/0:12,0:12:36.12:0,36,1436	0/0:23,0:23:69.05:0,69,2302	0/0:25,0:25:71.62:0,72,2320	0/0:32,0:32:90.31:0,90,3528	0/0:26,0:26:78.25:0,78,3070	0/0:20,0:20:60.21:0,60,2519	0/0:35,0:35:99:0,102,4085	0/0:16,0:16:48.15:0,48,1889	0/0:23,0:23:69.24:0,69,2722	0/0:12,0:12:36.12:0,36,1488	0/0:33,0:33:99:0,99,4016	0/0:28,0:28:84.27:0,84,3071	0/0:28,0:28:84.29:0,84,3373	0/0:31,0:31:93.32:0,93,3742	0/0:24,0:24:72.25:0,72,2930	0/0:22,0:22:66.23:0,66,2770	0/0:14,0:14:36.12:0,36,1511	0/0:22,0:22:66.21:0,66,2569	0/0:23,0:23:69.24:0,69,2867	0/0:33,0:33:96.33:0,96,3901	0/0:22,0:22:66.23:0,66,2623	0/0:19,0:19:57.20:0,57,2323	0/0:32,0:32:93.31:0,93,3535	0/0:19,0:19:57.20:0,57,2319	0/0:20,0:20:60.21:0,60,2445	0/0:24,0:24:72.25:0,72,2836	0/0:18,0:18:54.19:0,54,2267
chr10	71131597	.	TG	T	2129.45	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.575;DP=528;FS=0.472;HRun=5;HaplotypeScore=56.7236;InbreedingCoeff=0.9910;MQ=88.67;MQ0=0;MQRankSum=-1.698;QD=27.66;ReadPosRankSum=1.494;VQSLOD=3.7209;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,34:37:72.86:1063,73,0	0/0:7,0:7:15.05:0,15,205	0/0:23,0:23:55.96:0,56,721	0/0:19,0:19:53.17:0,53,641	0/0:22,0:22:57.19:0,57,779	0/0:18,0:18:51.16:0,51,682	0/0:20,0:20:54.18:0,54,738	0/0:26,0:26:63.21:0,63,857	0/0:18,0:18:54.16:0,54,706	0/0:30,0:30:87.27:0,87,1145	0/0:20,0:20:54.18:0,54,723	0/0:20,0:20:60.20:0,60,821	0/0:12,0:12:36.10:0,36,459	0/0:11,0:11:33.11:0,33,451	0/0:19,0:19:57.19:0,57,777	0/0:21,0:21:63.21:0,63,862	0/0:31,0:31:93.31:0,93,1265	1/1:2,14:16:42.12:476,42,0	0/0:13,0:13:39.08:0,39,493	0/0:24,0:24:66.22:0,66,898	0/0:19,0:19:57.19:0,57,779	0/0:6,0:6:18.06:0,18,243	0/0:20,0:20:57.19:0,57,780	0/0:15,0:15:42.14:0,42,571	0/0:19,0:19:54.18:0,54,739	1/1:1,17:18:51.09:546,51,0	0/0:18,0:18:48.16:0,48,656	1/1:0,6:6:18.05:204,18,0
chr10	71132064	.	GCAAA	G	674.62	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.142;DP=813;FS=0.965;HRun=0;HaplotypeScore=134.3815;InbreedingCoeff=0.9993;MQ=76.34;MQ0=0;MQRankSum=-0.916;QD=30.66;ReadPosRankSum=1.822;VQSLOD=3.8107;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,120,2838	0/0:16,0:16:48.16:0,48,1188	0/0:38,0:37:84.24:0,84,1902	0/0:29,0:27:57.16:0,57,1229	0/0:31,0:31:84.07:0,84,1961	0/0:15,0:15:42.12:0,42,1029	0/0:37,0:37:99:0,102,2289	0/0:37,0:37:81.26:0,81,1873	0/0:34,0:34:96.33:0,96,2367	0/0:34,0:34:93.31:0,93,2195	0/0:16,0:16:42.14:0,42,1030	0/0:32,0:32:90.31:0,90,2299	0/0:38,0:38:96.31:0,96,2242	0/0:34,0:34:99:0,102,2529	0/0:35,0:35:99:0,102,2608	0/0:29,0:29:81.27:0,81,2013	0/0:18,0:18:51.09:0,51,1202	1/1:3,19:22:48.05:770,48,0	0/0:23,0:23:66.20:0,66,1347	0/0:30,0:30:84.22:0,84,1970	0/0:59,0:59:99:0,153,3837	0/0:24,0:24:69.22:0,69,1669	0/0:21,0:21:60.20:0,60,1424	0/0:32,0:32:90.31:0,90,2205	0/0:13,0:13:36.12:0,36,929	0/0:31,0:31:90.30:0,90,2142	0/0:27,0:27:72.25:0,72,1724	0/0:10,0:10:30.10:0,30,773
chr10	71132664	.	GAGAGA	G	3040.13	PASS	AB=0.532;AC=7;AF=0.125;AN=56;BaseQRankSum=10.988;DP=626;FS=1.842;HRun=0;HaplotypeScore=118.4440;InbreedingCoeff=0.8337;MQ=81.05;MQ0=0;MQRankSum=-10.033;QD=42.22;ReadPosRankSum=1.632;VQSLOD=3.6808;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:26:49.05:985,49,0	0/0:14,0:14:42.14:0,42,1245	0/0:19,0:19:51.17:0,51,1413	0/0:22,0:22:51.13:0,51,1304	0/0:25,0:25:72.25:0,72,2176	0/0:21,0:21:54.19:0,54,1649	0/0:20,0:20:60.17:0,60,1674	0/0:35,0:35:90.31:0,90,2636	0/0:19,0:19:54.19:0,54,1630	0/0:29,0:29:75.26:0,75,2287	0/0:22,0:22:66.23:0,66,2014	0/0:17,0:17:51.18:0,51,1555	0/0:16,0:16:48.16:0,48,1414	0/0:29,0:29:81.28:0,81,2453	0/0:14,0:14:42.13:0,42,1211	0/0:23,0:23:66.23:0,66,1998	0/0:37,0:37:99:0,99,2953	1/1:2,10:12:30.10:615,30,0	0/0:19,0:19:54.19:0,54,1611	0/0:23,0:23:63.22:0,63,1920	0/0:26,0:26:60.15:0,60,1628	0/0:15,0:15:39.13:0,39,1146	0/0:29,0:29:81.28:0,81,2413	0/0:21,0:21:63.22:0,63,1923	0/0:28,0:28:84.29:0,84,2545	0/1:3,22:25:99:1218,0,111	0/0:31,0:31:90.31:0,90,2737	1/1:0,9:9:18.06:369,18,0
chr10	71133093	.	TAA	T	1121.09	PASS	AB=0.764;AC=14;AF=0.250;AN=56;BaseQRankSum=4.433;DP=346;FS=2.033;HRun=12;HaplotypeScore=63.3996;InbreedingCoeff=0.7087;MQ=66.53;MQ0=1;MQRankSum=0.134;QD=11.32;ReadPosRankSum=2.902;VQSLOD=1.9553;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:17:29.77:286,30,0	1/1:0,0:2:5.49:24,5,0	0/1:17,0:9:0.12:0,0,78	0/0:22,0:14:8.72:0,9,191	0/0:10,0:10:18.06:0,18,268	0/0:14,0:14:38.88:0,39,517	0/0:9,0:9:24.08:0,24,358	0/0:16,0:19:39.11:0,39,537	0/0:5,0:7:16.99:0,17,171	0/1:3,0:11:9.22:51,0,9	1/1:2,0:9:10.11:62,10,0	0/0:11,0:12:26.50:0,26,303	0/0:14,0:14:27.03:0,27,395	0/0:10,0:10:27.05:0,27,371	0/0:19,0:19:44.75:0,45,536	0/0:10,0:10:24.05:0,24,333	0/0:18,0:21:59.12:0,59,774	1/1:3,12:16:35.80:347,36,0	0/0:16,0:21:53.10:0,53,640	0/0:7,0:8:15.04:0,15,207	0/0:2,0:3:5.51:0,6,53	0/0:4,0:4:3.01:0,3,45	0/0:7,0:7:18.06:0,18,269	0/0:17,0:17:35.55:0,36,448	0/0:10,0:10:30.10:0,30,440	1/1:5,13:16:0.08:324,0,0	0/0:9,0:9:18.06:0,18,269	1/1:1,6:7:20.84:196,21,0
chr10	71134026	.	A	AG	1498.76	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.514;DP=813;FS=2.003;HRun=5;HaplotypeScore=73.7135;InbreedingCoeff=0.9833;MQ=72.97;MQ0=3;MQRankSum=-4.257;QD=32.58;ReadPosRankSum=3.579;VQSLOD=4.3155;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,42:46:99:1594,123,0	0/0:8,0:8:15.04:0,15,161	0/0:30,0:28:80.94:0,81,845	0/0:26,0:23:63.15:0,63,677	0/0:25,0:25:69.17:0,69,741	0/0:15,0:15:36.08:0,36,387	0/0:30,0:30:84.21:0,84,902	0/0:45,0:44:99:0,123,1306	0/0:28,0:28:81.19:0,81,862	0/0:28,0:28:78.17:0,78,828	0/0:12,0:12:30.06:0,30,314	0/0:47,0:47:99:0,126,1348	0/0:37,0:37:99:0,105,1128	0/0:16,0:16:48.11:0,48,508	0/0:34,0:34:96.24:0,96,1032	0/0:31,0:31:84.19:0,84,895	0/0:38,0:38:99:0,111,1182	0/0:24,0:24:63.14:0,63,668	0/0:25,0:24:66.15:0,66,701	0/0:28,0:28:72.16:0,72,765	0/0:63,0:63:99:0,183,1948	0/0:23,0:23:69.14:0,69,725	0/0:27,0:27:81.20:0,81,863	0/0:39,0:39:99:0,114,1181	0/0:22,0:22:57.12:0,57,605	0/0:24,0:24:66.16:0,66,709	0/0:30,0:30:84.17:0,84,885	0/0:12,0:12:30.07:0,30,322
chr10	71135454	.	C	CCCG	1214.62	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=1.322;DP=405;FS=7.297;HRun=0;HaplotypeScore=79.6563;InbreedingCoeff=0.9607;MQ=81.23;MQ0=0;MQRankSum=1.553;QD=14.29;ReadPosRankSum=-6.759;VQSLOD=0.7703;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:20:21.37:335,21,0	1/1:5,0:5:11.99:112,12,0	0/0:14,0:14:35.71:0,36,517	0/0:8,0:8:19.09:0,19,238	0/0:26,0:26:16.64:0,17,449	0/0:14,0:14:36.06:0,36,554	0/0:13,0:13:36.07:0,36,555	0/0:27,0:27:65.77:0,66,1005	0/0:9,0:9:18:0,18,268	1/1:0,8:14:35.84:319,36,0	1/1:1,7:17:8.88:114,9,0	0/0:11,0:11:27.04:0,27,391	0/0:12,0:12:30.08:0,30,485	0/0:19,0:19:42.04:0,42,606	0/0:15,0:15:35.88:0,36,463	0/0:9,0:9:17.98:0,18,243	0/0:27,0:27:78.17:0,78,1163	1/1:1,5:12:9.02:151,9,0	0/0:17,0:17:50.94:0,51,637	0/0:19,0:19:41.73:0,42,507	0/0:10,0:10:27.09:0,27,433	0/0:13,0:13:25.43:0,25,406	0/0:16,0:16:32.90:0,33,402	0/0:16,0:16:39.04:0,39,530	0/0:18,0:18:35.90:0,36,472	1/1:0,6:12:26.55:204,27,0	0/0:7,0:7:21.03:0,21,312	1/1:5,0:5:15.01:170,15,0
chr10	71135875	.	GCTGTCTTGGGAAATTCACAGGCTC	G	5237.70	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.937;DP=649;FS=0.000;HRun=0;HaplotypeScore=395.7786;InbreedingCoeff=0.9345;MQ=89.34;MQ0=0;MQRankSum=-8.920;QD=113.86;ReadPosRankSum=3.279;VQSLOD=3.2262;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,12903	1/1:2,3:5:3.01:196,3,0	0/0:23,0:23:66.23:0,66,4443	0/0:27,0:27:75.22:0,75,5227	0/0:18,0:18:54.19:0,54,5118	0/0:23,0:23:66.23:0,66,7155	0/0:21,0:21:63.22:0,63,6049	0/0:27,0:27:75.26:0,75,6586	0/0:27,0:27:78.25:0,78,7230	1/1:8,15:23:39.13:2544,39,0	1/1:4,14:18:42.14:2499,42,0	0/0:22,0:22:66.23:0,66,7321	0/0:24,0:24:69.24:0,69,7194	0/0:23,0:23:69.24:0,69,7163	0/0:30,0:30:78.27:0,78,7851	0/0:23,0:23:69.24:0,69,7130	0/0:21,0:21:63.18:0,63,6146	0/0:18,0:18:51.17:0,51,4806	0/0:24,0:24:57.20:0,57,5223	0/0:20,0:20:57.20:0,57,5686	0/0:34,0:34:96.33:0,96,9466	0/0:13,0:13:36.12:0,36,3671	0/0:18,0:18:51.18:0,51,4880	0/0:34,0:34:99:0,99,9987	0/0:14,0:14:42.14:0,42,4691	0/0:29,0:29:84.29:0,84,8234	0/0:26,0:26:75.26:0,75,7616	0/0:17,0:17:51.18:0,51,5365
chr10	71136168	.	A	AAGGG	680	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=6.700;DP=651;FS=2.728;HRun=0;HaplotypeScore=124.5382;InbreedingCoeff=0.6392;MQ=60.65;MQ0=14;MQRankSum=-4.358;QD=14.17;ReadPosRankSum=0.827;VQSLOD=3.5031;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:34.80:270,0,35	0/0:7,0:6:18.06:0,18,335	0/0:33,0:13:26.66:0,27,371	0/0:25,0:11:20.24:0,20,304	0/0:27,0:27:72.19:0,72,1202	0/0:23,0:23:50.23:0,50,1066	0/0:34,0:34:85.84:0,86,1612	0/0:25,0:25:62.46:0,62,918	0/0:22,0:22:66.09:0,66,1070	0/0:28,0:27:78.07:0,78,1308	0/0:15,0:15:38.73:0,39,572	0/0:28,0:28:77.82:0,78,1351	0/0:24,0:24:69.10:0,69,1079	0/0:20,0:20:60.17:0,60,1025	0/0:22,0:22:63.16:0,63,1037	0/0:25,0:25:54.39:0,54,1243	0/0:21,0:21:60.19:0,60,1099	1/1:4,18:23:23.43:516,23,0	0/0:17,0:16:45.02:0,45,673	0/0:15,0:15:31.94:0,32,542	0/0:33,0:33:90.24:0,90,1568	0/0:23,0:23:60.09:0,60,872	0/0:19,0:18:51.17:0,51,960	0/0:33,0:33:93.24:0,93,1567	0/0:17,0:17:51.08:0,51,812	0/0:22,0:22:66.11:0,66,1089	0/0:18,0:18:48.15:0,48,851	0/0:26,0:26:38.52:0,39,703
chr10	71136200	.	AAG	A	1760.27	PASS	AB=0.987;AC=7;AF=0.125;AN=56;BaseQRankSum=7.452;DP=640;FS=3.426;HRun=0;HaplotypeScore=87.2183;InbreedingCoeff=0.5083;MQ=62.32;MQ0=22;MQRankSum=-0.873;QD=17.26;ReadPosRankSum=0.575;VQSLOD=3.4662;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:59.68:0,60,851	0/1:11,0:8:28.93:29,0,139	0/0:28,0:9:21.07:0,21,291	0/0:24,0:9:21.06:0,21,247	0/0:22,0:22:66.22:0,66,1191	0/0:19,0:19:57.19:0,57,1052	0/0:29,0:29:62.76:0,63,1287	0/0:33,0:33:88.32:0,88,1346	0/0:20,0:20:60.20:0,60,1132	0/1:24,1:19:99:114,0,412	0/1:11,0:11:60.03:60,0,114	0/0:27,0:27:81.28:0,81,1511	0/0:26,0:26:78.27:0,78,1499	0/0:20,0:20:57.19:0,57,980	0/0:25,0:25:71.85:0,72,1336	0/0:23,0:23:69.23:0,69,1288	0/0:23,0:23:69.23:0,69,1286	0/0:13,0:13:25.03:0,25,451	0/0:17,0:17:48.10:0,48,819	0/0:14,0:14:37.36:0,37,636	0/0:42,0:42:99:0,122,2126	0/0:22,0:22:66.20:0,66,1136	0/0:22,0:21:63.21:0,63,1134	0/0:29,0:29:81.23:0,81,1474	0/0:15,0:15:45.14:0,45,749	1/1:1,26:26:55.87:1169,56,0	0/0:18,0:18:51.17:0,51,876	1/1:1,27:25:33.11:531,33,0
chr10	71136202	.	G	GGA	1806.67	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=0.882;DP=643;FS=7.824;HRun=0;HaplotypeScore=91.6572;InbreedingCoeff=0.9900;MQ=64.69;MQ0=22;MQRankSum=0.322;QD=17.54;ReadPosRankSum=-0.313;VQSLOD=3.2869;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:39.52:0,40,512	1/1:2,9:8:15.05:249,15,0	0/0:29,0:11:21.06:0,21,268	0/0:24,0:10:21.05:0,21,247	0/0:23,0:23:48.14:0,48,603	0/0:20,0:20:54.16:0,54,681	0/0:29,0:29:66.14:0,66,792	0/0:33,0:33:75.23:0,75,951	0/0:20,0:20:54.15:0,54,678	1/1:5,21:20:48.15:767,48,0	1/1:1,10:11:24.08:400,24,0	0/0:27,0:27:66.20:0,66,834	0/0:26,0:26:72.23:0,72,924	0/0:20,0:20:48.16:0,48,617	0/0:26,0:26:69.21:0,69,873	0/0:22,0:22:63.20:0,63,809	0/0:23,0:23:57.18:0,57,731	0/0:14,0:14:19.06:0,19,162	0/0:17,0:17:39.12:0,39,499	0/0:13,0:13:33.11:0,33,419	0/0:42,0:42:99:0,108,1384	0/0:21,0:21:51.16:0,51,655	0/0:22,0:21:51.16:0,51,656	0/0:29,0:29:60.13:0,60,751	0/0:14,0:14:36.11:0,36,446	1/1:26,1:26:27.80:361,28,0	0/0:18,0:18:51.16:0,51,654	1/1:27,1:25:17.56:202,18,0
chr10	71136742	.	GA	G	2098.11	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.844;DP=773;FS=1.671;HRun=2;HaplotypeScore=82.9913;InbreedingCoeff=0.9979;MQ=91.14;MQ0=0;MQRankSum=-4.976;QD=32.78;ReadPosRankSum=3.224;VQSLOD=3.7662;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,45:45:99:1675,129,0	0/0:13,0:13:39.13:0,39,577	0/0:33,0:33:87.30:0,87,1343	0/0:31,0:31:83.70:0,84,986	0/0:29,0:29:87.28:0,87,1282	0/0:25,0:25:75.22:0,75,1094	0/0:28,0:28:84.26:0,84,1213	0/0:20,0:20:54.18:0,54,786	0/0:18,0:18:51.17:0,51,760	0/0:27,0:27:81.27:0,81,1194	0/0:27,0:27:78.22:0,78,1118	0/0:30,0:30:90.30:0,90,1349	0/0:29,0:29:78.25:0,78,1137	0/0:32,0:32:96.31:0,96,1417	0/0:38,0:38:99:0,111,1591	0/0:35,0:35:99:0,105,1542	0/0:40,0:40:99:0,117,1689	1/1:0,19:19:42.14:545,42,0	0/0:17,0:17:51.17:0,51,759	0/0:25,0:25:72.21:0,72,1016	0/0:48,0:48:99:0,141,2064	0/0:21,0:21:63.21:0,63,920	0/0:19,0:19:57.19:0,57,852	0/0:24,0:24:69.22:0,69,1008	0/0:23,0:23:63.19:0,63,904	0/0:44,0:44:99:0,132,1912	0/0:26,0:26:78.25:0,78,1142	0/0:7,0:7:21.07:0,21,315
chr10	71139172	.	T	TGG	2313.56	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.837;DP=719;FS=0.000;HRun=6;HaplotypeScore=83.1268;InbreedingCoeff=0.9941;MQ=83.50;MQ0=2;MQRankSum=-1.462;QD=40.59;ReadPosRankSum=-0.385;VQSLOD=2.8163;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.24:0,78,951	1/1:0,11:11:27.09:456,27,0	0/0:26,0:26:61.88:0,62,732	0/0:18,0:18:15.29:0,15,296	0/0:33,0:33:90.26:0,90,1086	0/0:26,0:25:66.20:0,66,805	0/0:12,0:12:33.10:0,33,403	0/0:41,0:41:99:0,108,1288	0/0:22,0:22:63.20:0,63,768	1/1:4,28:31:84.27:1392,84,0	1/1:1,13:14:36.12:608,36,0	0/0:33,0:33:93.28:0,93,1122	0/0:21,0:21:57.15:0,57,671	0/0:24,0:24:72.21:0,72,865	0/0:26,0:26:69.21:0,69,842	0/0:31,0:31:90.28:0,90,1098	0/0:40,0:40:99:0,120,1450	0/0:32,0:32:87.20:0,87,1027	0/0:15,0:15:39.12:0,39,476	0/0:30,0:30:87.27:0,87,1061	0/0:24,0:24:66.20:0,66,805	0/0:23,0:23:66.19:0,66,794	0/0:21,0:21:57.17:0,57,688	0/0:26,0:26:69.20:0,69,842	0/0:24,0:24:66.21:0,66,805	0/0:42,0:42:69.47:0,69,1307	0/0:26,0:26:72.21:0,72,866	0/0:20,0:20:57.17:0,57,695
chr10	71139911	.	GT	G	1073.36	PASS	AB=0.920;AC=7;AF=0.125;AN=56;BaseQRankSum=9.343;DP=656;FS=23.154;HRun=2;HaplotypeScore=75.1573;InbreedingCoeff=0.8390;MQ=83.73;MQ0=0;MQRankSum=-2.852;QD=18.19;ReadPosRankSum=-0.887;VQSLOD=2.1726;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1711	1/1:0,10:10:27.07:345,27,0	0/0:20,0:20:53.98:0,54,695	0/0:22,1:23:15.59:0,16,591	0/0:12,0:12:27.08:0,27,384	0/0:11,0:11:33.09:0,33,472	0/0:27,0:27:78.26:0,78,1167	0/0:36,0:36:99:0,99,1448	0/0:31,0:31:93.32:0,93,1393	1/1:1,18:19:51.12:630,51,0	1/1:0,7:7:18.02:234,18,0	0/0:27,0:27:81.27:0,81,1208	0/0:26,0:26:78.25:0,78,1147	0/0:21,0:21:63.21:0,63,941	0/0:32,0:32:93.27:0,93,1367	0/0:34,0:34:99:0,102,1526	0/0:33,0:33:99:0,99,1480	0/0:27,0:27:78.26:0,78,1166	0/0:22,0:22:66.22:0,66,981	0/0:15,0:15:45.14:0,45,654	0/0:44,0:44:99:0,129,1913	0/0:14,0:14:42.14:0,42,626	0/0:14,0:14:39.13:0,39,585	0/0:36,0:36:99:0,99,1482	0/0:14,0:14:39.08:0,39,585	0/1:21,2:23:11.37:11,0,832	0/0:24,0:24:72.21:0,72,1038	0/0:14,0:14:39.13:0,39,584
chr10	71140217	.	TTCTC	T	500.14	PASS	AB=0.990;AC=19;AF=0.380;AN=50;BaseQRankSum=-1.091;DP=525;FS=0.000;HRun=0;HaplotypeScore=100.8887;InbreedingCoeff=0.2044;MQ=66.32;MQ0=12;MQRankSum=1.103;QD=2.34;ReadPosRankSum=1.054;VQSLOD=1.7596;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:5.83:0,6,44	0/0:12,0:11:3.01:0,3,40	./.	0/0:24,0:13:0:0,0,0	0/1:19,0:19:17.90:30,0,18	0/1:25,0:25:30.09:30,0,75	1/1:18,0:19:11.38:116,11,0	0/0:34,0:29:1.25:0,1,3	1/1:15,0:15:3.01:41,3,0	0/0:22,0:21:29.06:0,29,319	0/0:17,0:16:2.64:0,3,13	1/1:22,0:22:1.82:5,2,0	0/1:16,0:17:22.41:22,0,299	0/0:21,0:21:5.78:0,6,32	1/1:13,1:15:8.89:88,9,0	1/1:14,1:16:12.02:138,12,0	1/1:16,0:16:5.72:56,6,0	1/1:12,1:13:5.69:56,6,0	./.	0/0:20,0:19:0.47:0,0,1	0/0:22,0:22:4.64:0,5,21	./.	0/0:15,0:15:3.01:0,3,54	0/1:18,0:18:20.33:20,0,148	0/0:27,0:27:0.05:0,0,19	0/0:18,0:19:8.20:0,8,61	0/1:18,1:17:10.96:40,0,11	0/0:13,0:12:2.74:0,3,12
chr10	71140269	.	C	CTG	1711.78	PASS	AB=0.992;AC=18;AF=0.321;AN=56;BaseQRankSum=3.680;DP=579;FS=6.406;HRun=0;HaplotypeScore=118.3922;InbreedingCoeff=0.5662;MQ=60.28;MQ0=37;MQRankSum=-0.460;QD=6.74;ReadPosRankSum=1.054;VQSLOD=2.8974;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:10.17:223,0,10	0/1:7,0:6:7.81:8,0,20	0/1:58,0:18:0.08:0,0,153	0/0:80,0:22:7.81:0,8,160	0/1:13,0:13:3.84:4,0,143	0/0:25,0:25:56.53:0,57,448	0/0:23,0:22:16.98:0,17,252	0/0:22,0:21:54.67:0,55,444	0/0:14,0:14:32.75:0,33,265	0/1:31,1:31:99:148,0,133	0/1:27,0:27:0.79:1,0,17	0/0:9,0:8:20.85:0,21,165	1/1:20,2:22:37.07:454,37,0	0/0:13,0:13:22.97:0,23,169	0/0:19,0:19:50.30:0,50,385	0/0:17,0:16:11.90:0,12,237	0/0:20,0:20:32.20:0,32,285	1/1:15,0:15:39.68:296,40,0	0/0:13,0:9:21:0,21,187	0/0:14,0:13:29.96:0,30,249	0/0:22,0:22:56.49:0,56,446	0/0:10,0:8:17.97:0,18,146	1/1:8,0:8:17.94:141,18,0	1/1:18,1:17:10.78:277,11,0	0/0:14,0:14:32.76:0,33,274	1/1:19,0:18:8.67:216,9,0	0/0:10,0:10:17.30:0,17,115	1/1:12,0:9:10.60:127,11,0
chr10	71140316	.	C	CCCTT	1577.72	PASS	AC=26;AF=0.565;AN=46;BaseQRankSum=-1.431;DP=519;FS=9.426;HRun=0;HaplotypeScore=128.7669;InbreedingCoeff=0.7201;MQ=56.80;MQ0=14;MQRankSum=0.921;QD=6.74;ReadPosRankSum=-3.139;VQSLOD=1.2245;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:24:5.22:0,5,34	1/1:8,0:8:9.03:135,9,0	./.	./.	1/1:19,0:19:6.02:127,6,0	1/1:17,3:21:6.02:138,6,0	1/1:12,0:12:5.99:51,6,0	./.	1/1:11,0:11:9:159,9,0	1/1:34,0:34:35.53:131,36,0	1/1:20,0:20:13.91:63,14,0	0/0:20,0:19:21.03:0,21,253	0/0:19,0:21:12:0,12,118	0/0:15,0:14:15.03:0,15,203	1/1:17,0:17:11.93:99,12,0	1/1:12,3:14:3.01:69,3,0	0/0:31,0:31:33.03:0,33,408	0/0:12,0:11:2.68:0,3,11	./.	1/1:14,8:21:21.07:411,21,0	1/1:20,6:26:6.02:138,6,0	0/0:11,0:16:5.93:0,6,56	0/0:8,0:8:6.01:0,6,55	0/0:15,0:16:17.44:0,17,145	1/1:10,3:13:3.01:69,3,0	0/0:5,0:19:5.92:0,6,40	1/1:9,6:15:9.75:161,10,0	./.
chr10	71140333	.	C	CTTT	2900.84	PASS	AB=1.000;AC=5;AF=0.093;AN=54;BaseQRankSum=2.894;DP=505;FS=6.213;HRun=2;HaplotypeScore=101.8181;InbreedingCoeff=0.7179;MQ=52.97;MQ0=20;MQRankSum=-2.184;QD=46.05;ReadPosRankSum=2.648;VQSLOD=3.6005;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:33.07:0,33,513	0/1:11,0:11:27.83:190,0,28	0/0:10,0:2:3.01:0,3,54	./.	0/0:15,0:15:40.68:0,41,664	0/0:24,0:23:50.23:0,50,830	0/0:17,0:17:47.87:0,48,748	0/0:22,0:16:43.95:0,44,753	0/0:13,0:13:32.61:0,33,507	1/1:7,25:32:87.30:1897,87,0	1/1:9,8:20:51.05:942,51,0	0/0:23,0:22:63.20:0,63,1131	0/0:24,0:24:66.21:0,66,1078	0/0:21,0:20:60.14:0,60,1008	0/0:18,0:17:47.17:0,47,727	0/0:17,0:16:32.66:0,33,580	0/0:33,0:33:87.28:0,87,1569	0/0:13,0:12:21.18:0,21,426	0/0:15,0:13:39.13:0,39,718	0/0:22,0:20:32.17:0,32,593	0/0:25,0:24:45.60:0,46,847	0/0:16,0:16:42.08:0,42,658	0/0:12,0:12:26.99:0,27,417	0/0:18,0:18:51.10:0,51,725	0/0:13,0:13:26.64:0,27,467	0/0:17,0:17:48.10:0,48,710	0/0:14,0:14:19.96:0,20,397	0/0:10,0:8:21.17:0,21,232
chr10	71140335	.	T	TC	206.96	PASS	AB=0.833;AC=2;AF=0.037;AN=54;BaseQRankSum=5.590;DP=507;FS=12.875;HRun=2;HaplotypeScore=98.8978;InbreedingCoeff=-0.0472;MQ=53.14;MQ0=20;MQRankSum=-1.286;QD=7.96;ReadPosRankSum=-2.379;VQSLOD=-0.5500;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:26.25:0,26,347	0/0:11,0:11:10.18:0,10,185	0/0:7,0:1:3.01:0,3,42	./.	0/0:15,0:15:45.14:0,45,600	0/0:26,0:25:60.16:0,60,785	0/0:17,0:17:47.75:0,48,636	0/0:21,0:15:37.13:0,37,542	0/0:13,0:13:36.11:0,36,472	0/0:32,0:32:87.19:0,87,968	0/0:20,0:20:47.92:0,48,442	0/0:23,0:22:63.20:0,63,861	0/0:25,0:25:69.02:0,69,873	0/0:20,0:19:57.19:0,57,797	0/0:17,0:16:48.16:0,48,670	0/0:17,0:16:38.61:0,39,495	0/0:33,0:33:96.32:0,96,1333	0/0:13,0:12:19.80:0,20,314	0/0:15,0:13:39.13:0,39,545	0/0:23,0:21:51.09:0,51,641	0/0:26,0:25:54.15:0,54,708	0/0:16,0:16:42:0,42,539	0/0:13,0:13:29.95:0,30,353	0/0:20,0:20:50.94:0,51,595	0/0:14,0:14:33.09:0,33,430	0/1:16,0:16:99:118,0,354	0/0:14,0:14:31.64:0,32,390	0/1:5,5:8:95.35:178,0,95
chr10	71140402	.	CTA	C	2107.79	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.098;DP=563;FS=2.575;HRun=0;HaplotypeScore=83.3211;InbreedingCoeff=0.9996;MQ=69.69;MQ0=0;MQRankSum=0.317;QD=35.13;ReadPosRankSum=2.974;VQSLOD=6.1450;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:60.21:0,60,1157	0/0:16,0:16:42.14:0,42,811	0/0:15,0:13:33.08:0,33,544	0/0:14,0:14:36.09:0,36,654	0/0:13,0:13:39.12:0,39,712	0/0:33,0:33:96.33:0,96,1845	0/0:21,0:21:63.22:0,63,1208	0/0:23,0:23:63.21:0,63,1187	0/0:15,0:15:45.14:0,45,825	0/0:27,0:27:81.28:0,81,1553	0/0:14,0:14:36.12:0,36,694	0/0:18,0:18:54.17:0,54,1000	1/1:1,20:21:51.17:781,51,0	0/0:16,0:16:45.14:0,45,835	0/0:23,0:23:66.23:0,66,1274	0/0:18,0:18:48.16:0,48,917	0/0:32,0:32:87.29:0,87,1657	0/0:17,0:17:48.16:0,48,913	0/0:12,0:12:33.10:0,33,604	0/0:18,0:18:48.16:0,48,909	0/0:25,0:25:61.85:0,62,1304	0/0:21,0:21:60.21:0,60,1159	1/1:0,18:18:45.15:689,45,0	1/1:1,20:21:51.17:781,51,0	0/0:25,0:25:69.24:0,69,1333	0/0:27,0:27:75.20:0,75,1408	0/0:12,0:12:33.11:0,33,637	0/0:19,0:19:54.19:0,54,1042
chr10	71142334	.	TG	T	583.28	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.871;DP=588;FS=0.652;HRun=1;HaplotypeScore=69.5648;InbreedingCoeff=0.9041;MQ=66.59;MQ0=1;MQRankSum=-5.303;QD=15.76;ReadPosRankSum=-0.975;VQSLOD=3.1580;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,2105	1/1:1,2:3:8.96:71,9,0	0/0:24,0:20:57.19:0,57,910	0/0:32,3:33:2.42:0,2,1094	0/0:10,0:10:27.09:0,27,432	0/0:17,0:17:48.16:0,48,765	0/0:31,0:31:93.27:0,93,1440	0/0:26,0:26:75.26:0,75,1199	0/0:20,0:20:60.20:0,60,959	1/1:3,20:23:65.74:523,66,0	1/1:0,11:11:17.85:125,18,0	0/0:24,0:24:72.25:0,72,1151	0/0:22,0:22:66.23:0,66,1053	0/0:13,0:13:36.12:0,36,575	0/0:22,0:22:63.20:0,63,982	0/0:19,0:19:57.19:0,57,909	0/0:28,0:28:84.24:0,84,1306	0/0:24,0:24:72.20:0,72,1123	0/0:12,0:12:36.12:0,36,576	0/0:7,0:7:21.07:0,21,336	0/0:37,0:37:99:0,111,1773	0/0:20,0:20:60.20:0,60,959	0/0:17,0:17:48.16:0,48,761	0/0:41,0:41:99:0,123,1930	0/0:18,0:18:54.18:0,54,863	0/0:16,1:17:30.09:0,30,746	0/0:16,0:16:48.16:0,48,767	0/0:5,0:5:15.05:0,15,240
chr10	71142336	.	TC	T	609	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.170;DP=594;FS=0.000;HRun=1;HaplotypeScore=71.8415;InbreedingCoeff=0.9678;MQ=66.52;MQ0=1;MQRankSum=-5.679;QD=16.46;ReadPosRankSum=-0.840;VQSLOD=3.3517;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,2149	1/1:1,2:3:8.96:71,9,0	0/0:21,0:17:51.17:0,51,800	0/0:37,0:35:52.36:0,52,1245	0/0:10,0:10:27.09:0,27,431	0/0:17,0:17:48.16:0,48,765	0/0:31,0:31:93.30:0,93,1460	0/0:28,0:28:81.26:0,81,1253	0/0:20,0:20:60.20:0,60,941	1/1:3,20:23:68.74:550,69,0	1/1:0,11:11:17.85:125,18,0	0/0:24,0:24:72.25:0,72,1146	0/0:23,0:23:69.21:0,69,1069	0/0:13,0:13:39.12:0,39,597	0/0:22,0:22:66.22:0,66,1048	0/0:19,0:19:57.19:0,57,908	0/0:27,0:27:81.26:0,81,1260	0/0:24,0:24:72.23:0,72,1127	0/0:13,0:13:39.13:0,39,624	0/0:8,0:8:21.07:0,21,336	0/0:37,0:37:99:0,111,1734	0/0:20,0:20:60.20:0,60,959	0/0:18,0:18:48.16:0,48,767	0/0:40,0:40:99:0,120,1864	0/0:19,0:19:57.17:0,57,881	0/0:16,1:17:30.10:0,30,743	0/0:17,0:17:51.16:0,51,788	0/0:5,0:5:15.05:0,15,240
chr10	71142393	.	AC	A	577.81	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.227;DP=682;FS=3.418;HRun=1;HaplotypeScore=79.6943;InbreedingCoeff=0.8866;MQ=67.62;MQ0=2;MQRankSum=-9.087;QD=18.06;ReadPosRankSum=0.485;VQSLOD=3.9333;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1942	1/1:0,8:8:23.97:202,24,0	0/0:37,0:34:96.26:0,96,1459	0/0:27,0:24:63.21:0,63,973	0/0:11,0:11:30.10:0,30,480	0/0:14,0:14:42.14:0,42,668	0/0:32,0:32:96.33:0,96,1535	0/0:31,0:31:93.32:0,93,1486	0/0:31,0:31:93.28:0,93,1437	1/1:1,15:16:0.02:385,0,0	1/1:0,8:8:14.95:117,15,0	0/0:27,0:27:81.23:0,81,1222	0/0:16,0:16:48.15:0,48,742	0/0:29,0:29:87.30:0,87,1388	0/0:23,0:23:66.23:0,66,1055	0/0:21,0:21:63.19:0,63,961	0/0:43,0:43:99:0,129,1988	0/0:32,0:32:96.31:0,96,1507	0/0:17,0:17:51.17:0,51,811	0/0:14,0:14:39.13:0,39,623	0/0:53,0:53:99:0,160,2541	0/0:14,0:14:42.14:0,42,671	0/0:16,0:16:48.16:0,48,767	0/0:42,0:42:99:0,123,1938	0/0:23,0:23:69.20:0,69,1055	0/0:22,2:24:15.97:0,16,999	0/0:21,0:21:63.21:0,63,1002	0/0:9,0:9:27.09:0,27,431
chr10	71142395	.	T	TAGG	1573.53	PASS	AB=0.926;AC=7;AF=0.125;AN=56;BaseQRankSum=10.290;DP=701;FS=7.447;HRun=0;HaplotypeScore=113.4495;InbreedingCoeff=0.8122;MQ=66.47;MQ0=2;MQRankSum=-10.160;QD=22.48;ReadPosRankSum=-1.896;VQSLOD=2.8121;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,1991	1/1:5,8:13:36.12:553,36,0	0/0:37,0:33:78.26:0,78,1236	0/0:29,0:25:57.19:0,57,883	0/0:12,0:12:33.10:0,33,507	0/0:14,0:14:39.13:0,39,627	0/0:32,0:32:87.30:0,87,1398	0/0:31,0:31:72.23:0,72,1114	0/0:30,0:30:90.29:0,90,1416	1/1:8,14:22:8.92:856,9,0	1/1:4,6:10:18.06:275,18,0	0/0:27,0:27:75.26:0,75,1194	0/0:15,0:15:42.14:0,42,669	0/0:29,0:29:84.27:0,84,1322	0/0:23,0:23:69.22:0,69,1086	0/0:21,0:21:63.21:0,63,1008	0/0:45,0:45:99:0,126,1987	0/0:32,0:32:93.30:0,93,1463	0/0:18,0:18:39.07:0,39,574	0/0:14,0:14:36.12:0,36,579	0/0:56,0:56:99:0,156,2454	0/0:14,0:14:36.11:0,36,555	0/0:16,0:16:48.16:0,48,771	0/0:41,0:41:99:0,114,1830	0/0:22,0:22:57.19:0,57,915	0/1:23,2:25:32.52:33,0,963	0/0:20,0:20:60.20:0,60,961	0/0:10,0:10:27.06:0,27,400
chr10	71142436	.	CCAA	C	1989.66	PASS	AB=0.935;AC=7;AF=0.125;AN=56;BaseQRankSum=10.890;DP=785;FS=5.310;HRun=0;HaplotypeScore=119.9412;InbreedingCoeff=0.7711;MQ=61.62;MQ0=5;MQRankSum=-8.263;QD=23.69;ReadPosRankSum=0.898;VQSLOD=3.6507;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,181,3969	1/1:2,18:20:54.18:891,54,0	0/0:21,0:10:27.08:0,27,496	0/0:26,0:20:39.13:0,39,935	0/0:24,0:24:72.25:0,72,1619	0/0:18,0:18:54.19:0,54,1224	0/0:35,0:35:99:0,99,2192	0/0:25,0:25:66.20:0,66,1381	0/0:37,0:37:99:0,108,2379	1/1:6,21:27:7.22:1118,7,0	1/1:3,5:8:6:100,6,0	0/0:33,0:33:99:0,99,2211	0/0:27,0:27:78.21:0,78,1751	0/0:29,0:28:78.27:0,78,1767	0/0:23,0:23:69.24:0,69,1508	0/0:25,0:25:72.25:0,72,1579	0/0:53,0:53:99:0,160,3508	0/0:30,0:30:90.31:0,90,2036	0/0:23,0:23:69.24:0,69,1530	0/0:17,0:17:51.18:0,51,1138	0/0:58,0:58:99:0,160,3542	0/0:14,0:14:42.14:0,42,952	0/0:17,0:17:51.18:0,51,1139	0/0:47,0:47:99:0,141,2947	0/0:20,0:20:57.20:0,57,1292	0/1:27,2:29:15.60:16,0,1643	0/0:24,0:24:72.25:0,72,1613	0/0:13,0:13:39.13:0,39,881
chr10	71142499	.	AG	A	1567.89	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.571;DP=761;FS=8.381;HRun=5;HaplotypeScore=76.4005;InbreedingCoeff=0.9991;MQ=73.20;MQ0=0;MQRankSum=-0.758;QD=28.51;ReadPosRankSum=0.995;VQSLOD=3.8814;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:54:99:0,153,2076	1/1:1,11:12:33.09:374,33,0	0/0:24,0:24:68.76:0,69,855	0/0:18,0:18:36.06:0,36,452	0/0:32,0:32:90.26:0,90,1191	0/0:27,0:27:81.24:0,81,1075	0/0:36,0:36:96.29:0,96,1278	0/0:29,0:29:78.25:0,78,1054	0/0:27,0:27:75.25:0,75,1024	1/1:2,27:29:81.17:894,81,0	1/1:0,14:14:39.11:442,39,0	0/0:33,0:33:93.30:0,93,1252	0/0:27,0:27:72.24:0,72,982	0/0:25,0:25:72.22:0,72,967	0/0:20,0:20:57.18:0,57,766	0/0:23,0:23:63.21:0,63,862	0/0:41,0:41:99:0,114,1544	0/0:22,0:22:66.22:0,66,902	0/0:27,0:27:69.23:0,69,944	0/0:24,0:23:63.21:0,63,862	0/0:49,0:49:99:0,141,1909	0/0:32,0:32:90.30:0,90,1230	0/0:21,0:21:57.19:0,57,780	0/0:39,0:39:99:0,114,1538	0/0:18,0:18:54.18:0,54,739	0/0:25,0:25:66.20:0,66,885	0/0:23,0:23:69.22:0,69,920	0/0:9,0:9:24.04:0,24,305
chr10	71142990	.	TTC	T	1921.98	PASS	AB=0.974;AC=26;AF=0.464;AN=56;BaseQRankSum=5.798;DP=486;FS=59.424;HRun=0;HaplotypeScore=63.7130;InbreedingCoeff=0.5112;MQ=59.35;MQ0=7;MQRankSum=-6.824;QD=8.11;ReadPosRankSum=-6.073;VQSLOD=-0.3329;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:35,1:34:50.99:419,51,0	1/1:7,1:8:11.57:93,12,0	0/0:28,0:14:30.98:0,31,308	0/0:18,0:6:2.06:0,2,57	0/0:15,0:14:20.03:0,20,267	0/0:13,0:13:6.66:0,7,231	0/0:31,0:31:44.78:0,45,511	0/0:25,0:25:38.01:0,38,491	0/1:13,0:13:9.14:9,0,187	1/1:13,0:13:32.85:240,33,0	1/1:9,0:9:21.66:157,22,0	0/0:28,0:28:0.32:0,0,258	1/1:12,0:12:14.75:130,15,0	0/1:21,1:22:0.06:0,0,272	0/0:19,0:19:8.25:0,8,307	0/1:18,0:18:6.24:6,0,324	0/0:27,0:24:29.15:0,29,409	1/1:12,0:12:11.93:117,12,0	0/0:20,0:20:44.21:0,44,453	0/1:14,2:16:24.76:25,0,122	0/0:9,0:9:14.93:0,15,130	0/1:11,0:11:28.43:28,0,92	1/1:8,0:7:7.69:94,8,0	1/1:14,0:14:23.01:249,23,0	0/0:16,0:14:16.49:0,16,198	1/1:19,0:18:53.42:417,53,0	0/1:22,0:22:32.34:32,0,297	1/1:4,0:4:11.99:104,12,0
chr10	71143012	.	T	TC	225.47	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=1.891;DP=385;FS=3.892;HRun=1;HaplotypeScore=63.8676;InbreedingCoeff=0.8294;MQ=42.11;MQ0=31;MQRankSum=-2.038;QD=8.05;ReadPosRankSum=1.142;VQSLOD=1.0446;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:25:43.54:0,44,287	1/1:6,0:5:8.95:67,9,0	0/0:10,0:5:7.93:0,8,48	./.	0/0:8,0:8:8.93:0,9,74	0/0:11,0:11:23:0,23,156	0/0:26,0:26:36.38:0,36,230	0/0:15,0:14:34.26:0,34,231	0/0:17,0:16:30.63:0,31,233	1/1:16,0:12:32.79:246,33,0	1/1:2,4:6:5.93:41,6,0	0/0:14,0:13:32.60:0,33,221	0/0:20,0:18:42.13:0,42,290	0/0:15,0:15:32.65:0,33,241	0/0:15,0:13:23.21:0,23,156	0/0:20,0:20:40.55:0,41,278	0/0:30,0:27:47.67:0,48,374	0/0:10,0:10:20.74:0,21,138	0/0:17,0:14:26.89:0,27,216	0/0:13,0:12:16.13:0,16,120	0/0:9,0:9:11.85:0,12,80	0/0:6,0:5:8.70:0,9,51	0/0:7,0:7:11.68:0,12,69	0/0:8,0:7:11.96:0,12,94	0/0:11,0:8:20.49:0,20,130	0/0:16,0:13:27.91:0,28,188	0/0:12,0:12:22.44:0,22,158	0/0:8,0:6:17.89:0,18,134
chr10	71143214	.	G	GT	356.45	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=1.085;DP=299;FS=0.000;HRun=10;HaplotypeScore=73.3438;InbreedingCoeff=0.6185;MQ=78.61;MQ0=0;MQRankSum=-3.598;QD=6.04;ReadPosRankSum=-1.323;VQSLOD=1.2307;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:8:8.13:0,8,24	1/1:0,4:4:11.80:82,12,0	0/1:16,0:13:6.23:6,0,28	0/1:15,0:10:1.01:1,0,11	0/0:10,0:12:17.95:0,18,147	0/0:13,0:13:29.79:0,30,237	0/0:8,0:8:20.90:0,21,164	0/0:30,0:30:68.83:0,69,554	0/0:11,0:11:4.59:0,5,148	1/1:6,9:15:24.45:255,24,0	1/1:1,8:9:20.42:151,20,0	0/0:10,0:10:22.14:0,22,164	0/0:7,0:7:14.98:0,15,123	0/0:20,0:20:44.81:0,45,353	0/0:11,0:11:26.95:0,27,219	0/0:9,0:9:20.87:0,21,159	0/0:13,0:13:26.94:0,27,217	0/0:14,0:15:29.86:0,30,236	0/0:11,0:11:20.95:0,21,172	0/0:2,0:2:5.99:0,6,48	0/0:4,0:4:2.97:0,3,22	0/0:4,0:4:5.98:0,6,49	0/0:7,0:7:14.97:0,15,123	0/0:9,0:9:14.97:0,15,123	0/0:7,0:7:11.98:0,12,98	0/0:13,0:13:26.93:0,27,218	0/0:9,0:9:17.92:0,18,142	0/0:7,0:7:11.93:0,12,96
chr10	71143228	.	TA	T	5972.63	PASS	AB=0.929;AC=53;AF=0.946;AN=56;BaseQRankSum=-4.358;DP=228;FS=4.403;HRun=3;HaplotypeScore=36.3357;InbreedingCoeff=0.4953;MQ=73.35;MQ0=0;MQRankSum=-3.912;QD=27.52;ReadPosRankSum=2.442;VQSLOD=3.9593;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:21.07:259,21,0	1/1:1,3:4:11.95:93,12,0	0/0:11,0:8:12.90:0,13,119	0/1:12,1:8:4.25:4,0,96	1/1:1,11:12:30.05:354,30,0	1/1:1,12:13:33.10:408,33,0	1/1:0,8:8:21.07:260,21,0	1/1:2,20:20:54.17:669,54,0	1/1:2,6:8:18.05:217,18,0	1/1:3,10:13:30:299,30,0	1/1:2,7:9:17.84:139,18,0	1/1:0,6:6:18.06:221,18,0	1/1:0,6:6:15.05:186,15,0	1/1:2,10:12:30.09:371,30,0	1/1:1,8:9:21.07:260,21,0	1/1:1,5:6:12.04:148,12,0	1/1:0,11:11:27.08:334,27,0	1/1:0,11:11:27.04:303,27,0	1/1:0,7:7:21.02:224,21,0	1/1:0,2:2:6.02:74,6,0	1/1:0,2:2:6.02:74,6,0	1/1:0,3:3:9.03:111,9,0	1/1:0,6:6:15.05:186,15,0	1/1:2,4:6:9.03:111,9,0	1/1:0,6:6:12.04:149,12,0	1/1:0,9:9:27.08:334,27,0	1/1:1,4:5:12.04:148,12,0	1/1:0,1:1:3.01:37,3,0
chr10	71143644	.	G	GT	2332.22	PASS	AB=0.917;AC=11;AF=0.196;AN=56;BaseQRankSum=-0.188;DP=519;FS=0.432;HRun=10;HaplotypeScore=64.5312;InbreedingCoeff=0.8940;MQ=67.44;MQ0=0;MQRankSum=-0.655;QD=21.01;ReadPosRankSum=1.389;VQSLOD=4.6120;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:30:70.31:746,70,0	0/0:9,0:9:26.93:0,27,216	0/0:12,0:13:11.84:0,12,86	0/0:9,0:9:17.89:0,18,147	0/0:23,0:23:54.79:0,55,442	0/0:9,0:9:20.97:0,21,172	0/0:22,1:23:21.93:0,22,387	0/0:28,0:28:58.90:0,59,471	0/0:16,0:16:41.89:0,42,339	0/0:25,1:26:36.92:0,37,510	0/1:10,1:11:5.07:5,0,166	0/0:12,0:12:29.96:0,30,246	1/1:1,22:23:66.13:691,66,0	0/0:16,1:17:18.94:0,19,359	0/0:21,0:21:44.94:0,45,369	0/0:9,0:9:23.97:0,24,197	0/0:28,0:28:77.89:0,78,637	1/1:9,16:24:39.15:534,39,0	0/0:21,1:22:24.92:0,25,409	0/0:7,0:8:20:0,20,154	0/0:22,1:23:24.93:0,25,411	0/0:10,0:10:29.97:0,30,246	1/1:1,4:5:15.04:160,15,0	1/1:5,11:17:23.21:371,23,0	0/0:25,0:25:62.88:0,63,515	0/0:25,0:25:48.19:0,48,495	0/0:25,0:25:65.88:0,66,538	0/0:24,1:25:33.89:0,34,481
chr10	71143679	.	C	CT	1269.50	PASS	AB=0.622;AC=7;AF=0.125;AN=56;BaseQRankSum=3.404;DP=539;FS=6.408;HRun=9;HaplotypeScore=70.6926;InbreedingCoeff=0.8794;MQ=61.24;MQ0=8;MQRankSum=-5.635;QD=18.14;ReadPosRankSum=0.807;VQSLOD=3.7228;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:80.95:0,81,697	0/0:11,0:11:32.97:0,33,281	0/0:14,0:12:14.61:0,15,182	0/0:14,0:12:26.74:0,27,232	0/0:20,0:19:38.94:0,39,334	0/0:13,0:13:32.97:0,33,286	0/0:22,0:22:59.98:0,60,521	0/0:36,0:35:74.94:0,75,650	0/0:17,0:17:29.01:0,29,240	0/0:30,0:29:77.92:0,78,663	0/0:12,0:11:23.84:0,24,208	0/0:13,0:13:32.99:0,33,286	1/1:5,10:16:38.91:394,39,0	0/0:20,0:20:59.98:0,60,518	0/0:18,0:18:38.97:0,39,338	0/0:15,0:15:41.99:0,42,365	0/0:35,0:35:94.75:0,95,807	0/1:9,14:22:3.99:411,0,4	0/0:18,0:19:52.98:0,53,439	0/0:9,0:9:23.98:0,24,204	0/0:19,0:18:29.98:0,30,260	0/0:14,0:13:35.98:0,36,312	1/1:5,5:10:22.72:184,23,0	1/1:8,13:19:39.10:428,39,0	0/0:18,0:18:44.98:0,45,388	0/0:28,0:28:76.91:0,77,640	0/0:18,0:18:41.98:0,42,365	0/0:19,0:18:41.96:0,42,363
chr10	71143730	.	TGC	T	966.46	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=7.800;DP=528;FS=2.735;HRun=0;HaplotypeScore=76.2319;InbreedingCoeff=0.9900;MQ=53.56;MQ0=14;MQRankSum=-6.287;QD=40.27;ReadPosRankSum=0.144;VQSLOD=5.3021;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:38:99:0,111,2231	0/0:15,0:15:45.14:0,45,878	./.	./.	0/0:22,0:20:44.88:0,45,907	0/0:15,0:15:45.15:0,45,914	0/0:29,0:28:84.25:0,84,1612	0/0:27,0:24:69.23:0,69,1294	0/0:18,0:18:54.17:0,54,1061	0/0:26,0:24:75.25:0,75,1489	0/0:17,0:15:45.15:0,45,912	0/0:20,0:20:60.21:0,60,1217	0/0:9,0:9:24.08:0,24,486	0/0:13,0:13:39.13:0,39,790	0/0:25,0:25:75.26:0,75,1505	0/0:17,0:17:51.18:0,51,1036	0/0:42,0:41:99:0,126,2558	0/0:21,0:20:54.19:0,54,1096	0/0:19,0:19:57.10:0,57,1025	0/0:15,0:15:45.15:0,45,913	0/0:29,0:27:78.27:0,78,1582	0/0:14,0:13:39.13:0,39,790	0/0:23,0:22:57.20:0,57,1151	0/0:20,0:18:51.17:0,51,1016	0/0:11,0:9:27.09:0,27,547	1/1:0,17:19:57.18:870,57,0	0/0:17,0:17:48.16:0,48,960	1/1:0,5:5:15.04:214,15,0
chr10	71143734	.	AGGCAAGT	A	1680.91	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=7.960;DP=535;FS=1.722;HRun=0;HaplotypeScore=130.5242;InbreedingCoeff=0.9905;MQ=53.81;MQ0=15;MQRankSum=-7.102;QD=73.08;ReadPosRankSum=0.317;VQSLOD=4.1997;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:38:99:0,111,4443	0/0:15,0:15:45.11:0,45,1728	./.	./.	0/0:23,0:21:51.16:0,51,1944	0/0:16,0:16:48.16:0,48,1910	0/0:27,0:26:78.22:0,78,2986	0/0:30,0:25:72.25:0,72,2895	0/0:19,0:19:57.20:0,57,2335	0/0:25,0:23:72.25:0,72,2943	0/0:19,0:17:51.17:0,51,1954	0/0:20,0:20:60.19:0,60,2361	0/0:9,0:9:27.09:0,27,1082	0/0:13,0:13:39.13:0,39,1560	0/0:26,0:26:78.27:0,78,3023	0/0:17,0:17:51.17:0,51,2011	0/0:42,0:41:99:0,123,4998	0/0:21,0:20:54.19:0,54,2100	0/0:15,0:15:39.13:0,39,1565	0/0:15,0:15:45.15:0,45,1844	0/0:32,0:30:87.30:0,87,3496	0/0:14,0:13:36.12:0,36,1410	0/0:22,0:21:60.21:0,60,2365	0/0:21,0:19:54.19:0,54,2126	0/0:11,0:9:27.08:0,27,955	1/1:1,17:18:54.19:1426,54,0	0/0:19,0:19:54.19:0,54,2089	1/1:1,4:5:15.05:372,15,0
chr10	71143912	.	CTG	C	762.31	PASS	AB=0.905;AC=18;AF=0.346;AN=52;BaseQRankSum=2.777;DP=581;FS=5.453;HRun=0;HaplotypeScore=90.8327;InbreedingCoeff=-0.0222;MQ=71.00;MQ0=9;MQRankSum=1.337;QD=2.65;ReadPosRankSum=0.704;VQSLOD=1.2746;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:39:4.73:0,5,29	0/0:2,0:7:8.99:0,9,90	./.	./.	0/1:20,1:22:28.82:29,0,159	0/1:18,2:20:29.35:29,0,387	0/1:14,0:14:11.67:12,0,227	0/0:29,0:27:6.02:0,6,89	0/1:18,3:21:77.13:77,0,158	0/0:9,0:24:27.03:0,27,292	0/0:2,0:13:21:0,21,187	0/1:22,1:23:5.18:5,0,307	1/1:18,2:20:6.02:65,6,0	0/1:22,3:25:74.13:74,0,178	0/1:13,2:16:25.73:26,0,203	0/1:23,2:26:40.49:40,0,390	0/0:35,1:36:6.37:0,6,466	0/0:9,0:12:11.75:0,12,103	0/0:12,0:14:12:0,12,105	0/0:10,0:20:14.99:0,15,130	0/0:31,0:36:36.01:0,36,379	0/1:16,1:17:20.70:21,0,122	1/1:9,6:17:12.03:131,12,0	1/1:19,11:33:35.59:337,36,0	0/1:11,2:13:47.35:47,0,142	0/1:11,0:16:12.59:27,0,13	0/0:12,0:15:18.48:0,18,191	0/1:5,0:5:0:0,0,0
chr10	71146416	.	G	GA	1941.62	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.120;DP=856;FS=6.367;HRun=1;HaplotypeScore=102.0149;InbreedingCoeff=1.0000;MQ=81.97;MQ0=0;MQRankSum=-2.809;QD=38.83;ReadPosRankSum=2.226;VQSLOD=3.8249;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,144,1762	0/0:17,0:17:45.15:0,45,584	0/0:27,0:27:81.15:0,81,938	0/0:24,0:24:64.58:0,65,841	0/0:23,0:23:63.17:0,63,788	0/0:22,0:22:66.20:0,66,841	0/0:32,0:32:96.25:0,96,1188	0/0:32,0:32:93.27:0,93,1159	0/0:41,0:41:99:0,120,1530	0/0:30,0:29:90.26:0,90,1132	0/0:18,0:18:51.17:0,51,662	0/0:39,0:39:99:0,117,1500	0/0:34,0:34:99:0,102,1294	0/0:35,0:35:99:0,105,1315	0/0:33,0:33:99:0,99,1251	0/0:38,0:38:99:0,111,1427	0/0:30,0:30:84.22:0,84,1044	0/0:26,0:26:75.23:0,75,960	0/0:21,0:21:59.95:0,60,735	0/0:27,0:27:75.24:0,75,972	0/0:78,0:78:99:0,229,2853	0/0:23,0:23:66.21:0,66,843	0/0:23,0:23:63.19:0,63,802	0/0:35,0:35:99:0,102,1324	0/0:25,0:25:75.22:0,75,946	1/1:1,33:34:99:1460,99,0	0/0:20,0:20:57.19:0,57,740	1/1:0,16:16:42.09:603,42,0
chr10	71147110	.	T	TTTG	1198.54	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=0.855;DP=619;FS=7.453;HRun=0;HaplotypeScore=94.7937;InbreedingCoeff=0.6218;MQ=67.87;MQ0=6;MQRankSum=1.704;QD=13.17;ReadPosRankSum=8.265;VQSLOD=1.8596;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:72.88:0,73,618	0/0:9,0:9:26.97:0,27,254	0/0:24,0:11:16.86:0,17,164	0/0:23,0:11:8.36:0,8,115	0/0:24,0:24:56.96:0,57,441	0/0:19,0:19:31.01:0,31,351	0/0:15,0:15:40.68:0,41,330	0/0:27,0:27:71.28:0,71,585	0/0:28,0:28:67.65:0,68,541	0/0:29,0:29:75.40:0,75,676	0/0:20,0:20:45.51:0,46,432	0/0:18,0:18:51.33:0,51,375	0/0:25,0:24:17.72:0,18,290	0/0:30,0:29:57.50:0,58,534	0/0:25,0:25:59.25:0,59,538	0/0:23,0:23:65.28:0,65,565	0/0:30,0:30:53.40:0,53,459	0/1:18,0:18:49.31:49,0,103	0/0:15,0:14:33.06:0,33,212	0/0:16,0:16:31.17:0,31,260	0/0:8,0:8:14.14:0,14,88	0/0:22,0:22:58.50:0,58,504	0/0:26,0:24:20.71:0,21,179	0/1:23,0:23:5.85:6,0,133	0/0:16,0:16:48.01:0,48,429	1/1:8,27:37:70.96:970,71,0	0/0:25,0:25:31.76:0,32,287	1/1:0,12:13:18.06:305,18,0
chr10	71147629	.	A	ACG	1201.63	PASS	AB=0.951;AC=11;AF=0.196;AN=56;BaseQRankSum=7.976;DP=684;FS=11.747;HRun=0;HaplotypeScore=144.3617;InbreedingCoeff=0.6173;MQ=56.49;MQ0=43;MQRankSum=-0.169;QD=7.42;ReadPosRankSum=1.721;VQSLOD=2.8000;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:32:65.85:0,66,531	1/1:9,1:10:20.27:143,20,0	0/0:44,0:19:26.96:0,27,376	0/0:39,0:21:57.07:0,57,591	0/0:16,0:16:32.94:0,33,310	0/0:14,0:13:29:0,29,264	0/0:34,0:31:38.68:0,39,401	0/0:19,0:16:41.98:0,42,332	0/0:23,0:22:56.61:0,57,511	0/1:27,2:27:38.40:344,0,38	1/1:12,0:11:19.84:147,20,0	0/0:25,0:23:40.16:0,40,437	0/1:30,3:31:9.09:340,0,9	0/0:19,0:19:44.97:0,45,412	0/0:20,0:20:28.09:0,28,363	0/0:23,0:23:59.97:0,60,578	0/0:28,0:26:41.42:0,41,318	0/1:20,0:18:36.74:124,0,37	0/0:17,0:17:28.23:0,28,314	0/0:10,0:10:23.82:0,24,206	0/0:69,0:67:99:0,122,1052	0/0:16,0:14:22.97:0,23,165	1/1:17,0:15:5.96:45,6,0	1/1:39,2:39:6.45:220,6,0	0/0:13,0:13:28.99:0,29,228	0/0:27,0:27:67.79:0,68,559	0/0:18,0:16:34.69:0,35,273	0/0:13,0:9:23.85:0,24,180
chr10	71147689	.	ATG	A	89.45	PASS	AB=0.923;AC=8;AF=0.143;AN=56;BaseQRankSum=9.751;DP=782;FS=14.915;HRun=0;HaplotypeScore=167.5318;InbreedingCoeff=0.3496;MQ=48.41;MQ0=35;MQRankSum=-3.946;QD=0.66;ReadPosRankSum=-2.330;VQSLOD=1.6930;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:34:41.08:0,41,1352	1/1:7,0:7:8.49:32,8,0	0/0:25,1:9:20.90:0,21,353	0/0:29,0:13:35.62:0,36,580	0/0:22,0:22:32.46:0,32,1010	0/0:20,0:19:2.46:0,2,841	0/0:47,2:45:75:0,75,1997	0/0:23,0:19:57.17:0,57,984	0/0:29,1:28:53.76:0,54,1296	0/0:30,0:27:3.50:0,4,199	1/1:7,0:7:0.47:1,0,0	0/1:33,2:33:2.73:3,0,1201	0/1:35,3:36:99:129,0,105	0/0:26,0:26:66.10:0,66,1295	0/0:34,0:34:86.01:0,86,1699	0/0:36,0:36:70.16:0,70,1760	0/0:27,1:25:7.23:0,7,988	0/0:20,0:18:15.56:0,16,76	0/0:19,0:17:41.66:0,42,690	0/0:16,0:15:42.04:0,42,823	0/0:95,0:93:43.31:0,43,3806	0/0:24,0:20:17.23:0,17,820	0/1:10,1:11:0:1,0,0	0/1:33,4:35:10.53:33,0,11	0/0:16,0:16:30.05:0,30,609	0/0:35,0:33:83.16:0,83,1589	0/0:14,0:13:15.26:0,15,675	0/0:16,0:15:45.15:0,45,894
chr10	71147691	.	GCA	G	1901.57	PASS	AB=0.714;AC=13;AF=0.232;AN=56;BaseQRankSum=11.685;DP=782;FS=11.737;HRun=0;HaplotypeScore=161.2443;InbreedingCoeff=0.9093;MQ=48.72;MQ0=30;MQRankSum=-6.314;QD=12.94;ReadPosRankSum=2.834;VQSLOD=3.0990;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:33:71.98:0,72,1195	1/1:2,5:7:15.05:196,15,0	0/0:30,0:11:30.07:0,30,440	0/0:32,0:14:40.77:0,41,573	0/0:21,1:22:17.67:0,18,848	0/0:21,0:20:48.16:0,48,812	0/0:49,0:45:99:0,105,1757	0/0:24,0:20:48.16:0,48,813	0/0:30,0:28:69.21:0,69,1121	1/1:9,20:27:52.04:733,52,0	1/1:1,6:7:0.47:1,0,0	0/0:35,0:33:74.02:0,74,1190	1/1:19,19:36:36.79:619,37,0	0/0:26,0:26:66.23:0,66,1126	0/0:33,0:33:83.39:0,83,1366	0/0:37,0:37:99:0,99,1648	0/0:25,0:24:51.17:0,51,874	1/1:8,12:19:32.69:402,33,0	0/0:19,0:16:35.91:0,36,540	0/0:19,0:18:47.83:0,48,766	0/0:96,0:95:99:0,213,3509	0/0:21,0:18:42.14:0,42,720	0/1:6,4:10:0:1,0,0	1/1:20,16:34:8.41:119,8,0	0/0:15,0:15:30.10:0,30,515	0/0:35,0:33:87.25:0,87,1424	0/0:14,0:13:36.12:0,36,617	0/0:15,0:15:45.15:0,45,771
chr10	71147735	.	ACACACG	A	1150.74	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.381;DP=871;FS=11.392;HRun=0;HaplotypeScore=214.7934;InbreedingCoeff=0.9167;MQ=55.90;MQ0=9;MQRankSum=-7.754;QD=19.18;ReadPosRankSum=-1.612;VQSLOD=1.8179;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:90.31:0,90,3098	1/1:1,7:8:9.03:207,9,0	0/0:39,0:12:24.07:0,24,475	0/0:39,0:12:21.07:0,21,642	0/0:25,0:25:69.15:0,69,2142	0/0:23,0:23:66.23:0,66,2197	0/0:51,0:50:99:0,131,4300	0/0:36,0:36:99:0,99,3273	0/0:27,0:27:75.24:0,75,2458	1/1:6,18:24:57.04:998,57,0	1/1:2,7:9:0.38:2,0,0	0/0:35,0:35:88.79:0,89,2969	0/0:32,0:32:62.75:0,63,593	0/0:30,0:30:87.28:0,87,2938	0/0:41,0:41:99:0,111,3578	0/0:37,0:37:99:0,99,3312	0/0:25,0:25:72.07:0,72,2398	1/1:19,0:19:24.84:81,25,0	0/0:36,0:32:77.94:0,78,2329	0/0:25,0:25:72.24:0,72,2305	0/0:102,0:101:99:0,267,8460	0/0:26,0:26:72.21:0,72,2295	0/0:12,0:12:14.71:0,15,147	0/0:38,0:38:44.76:0,45,436	0/0:19,0:19:54.19:0,54,1832	0/0:35,0:35:99:0,105,3247	0/0:21,0:21:63.13:0,63,2083	0/0:21,0:21:63.09:0,63,1950
chr10	71147737	.	ACACG	A	1077.68	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.157;DP=861;FS=9.922;HRun=0;HaplotypeScore=180.4574;InbreedingCoeff=0.8906;MQ=55.44;MQ0=8;MQRankSum=-7.015;QD=18.58;ReadPosRankSum=-0.666;VQSLOD=2.7541;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:90.05:0,90,2360	1/1:8,0:8:9.02:95,9,0	0/0:36,0:11:22.44:0,22,279	0/0:35,0:11:21.07:0,21,459	0/0:24,0:24:69.11:0,69,1633	0/0:23,0:23:66.18:0,66,1650	0/0:52,0:51:99:0,137,3312	0/0:39,0:39:99:0,108,2568	0/0:27,0:27:78.20:0,78,1888	1/1:22,0:22:51.41:496,51,0	1/1:9,0:9:0.47:2,0,0	0/0:36,0:36:92.88:0,93,2262	0/0:31,1:32:25.85:0,26,78	0/0:30,0:30:87.28:0,87,2258	0/0:40,0:40:99:0,111,2742	0/0:37,0:37:99:0,99,2521	0/0:25,0:25:72.02:0,72,1822	1/1:6,13:19:33.11:622,33,0	0/0:34,0:30:77.94:0,78,1794	0/0:24,0:24:70.08:0,70,1737	0/0:101,0:100:99:0,270,6439	0/0:26,0:26:72.20:0,72,1740	0/0:12,0:12:5.80:0,6,14	0/0:36,0:36:18.30:0,18,44	0/0:19,0:19:54.15:0,54,1394	0/0:36,0:36:99:0,108,2502	0/0:21,0:21:63.13:0,63,1598	0/0:21,0:21:63.08:0,63,1487
chr10	71147739	.	ACG	A	2248.29	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=13.790;DP=852;FS=14.235;HRun=0;HaplotypeScore=141.4877;InbreedingCoeff=0.9489;MQ=55.79;MQ0=8;MQRankSum=-6.004;QD=17.16;ReadPosRankSum=1.448;VQSLOD=3.3324;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:92.90:0,93,1713	1/1:8,0:8:8.83:54,9,0	0/0:33,1:10:25.24:0,25,229	0/0:32,1:10:20.92:0,21,285	0/0:24,0:24:71.81:0,72,1183	0/0:23,0:23:66.18:0,66,1172	0/0:51,0:50:99:0,137,2375	0/0:37,0:37:99:0,108,1829	0/0:27,0:27:81.14:0,81,1376	1/1:21,0:21:52.74:345,53,0	0/1:9,0:9:0.09:0,0,0	0/0:39,0:39:99:0,102,1672	1/1:4,26:30:63.04:899,63,0	0/0:29,0:29:87.07:0,87,1591	0/0:40,0:40:99:0,114,2009	0/0:37,0:37:99:0,102,1787	0/0:26,0:26:74.96:0,75,1312	1/1:16,0:16:32.63:219,33,0	0/0:37,0:33:85.49:0,85,1250	0/0:24,0:24:70.08:0,70,1231	0/0:100,0:99:99:0,276,4689	0/0:25,0:25:58.07:0,58,1193	1/1:0,12:12:14.68:229,15,0	1/1:8,27:35:44.36:685,44,0	0/0:19,0:19:54.15:0,54,1001	0/0:38,0:38:99:0,114,1827	0/0:21,0:21:63.12:0,63,1127	0/0:21,0:21:57.13:0,57,1007
chr10	71148001	.	G	GGCT	2879.55	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.096;DP=613;FS=23.473;HRun=0;HaplotypeScore=90.8703;InbreedingCoeff=0.9735;MQ=76.42;MQ0=0;MQRankSum=-9.783;QD=49.65;ReadPosRankSum=1.517;VQSLOD=3.2651;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,160,2890	1/1:0,3:3:9.03:202,9,0	0/0:19,0:19:39.31:0,39,723	0/0:13,0:13:21.88:0,22,313	0/0:23,0:23:69.24:0,69,1283	0/0:27,0:27:81.28:0,81,1508	0/0:22,0:22:66.17:0,66,1113	0/0:23,0:23:69.20:0,69,1145	0/0:22,0:22:66.20:0,66,1161	1/1:0,9:10:27.08:607,27,0	1/1:0,6:6:15.05:367,15,0	0/0:31,0:31:90.31:0,90,1651	1/1:0,8:9:24.08:588,24,0	0/0:25,0:25:75.23:0,75,1326	0/0:32,0:32:96.32:0,96,1744	0/0:29,0:29:84.27:0,84,1535	0/0:29,0:29:87.30:0,87,1606	1/1:1,12:13:30.10:719,30,0	0/0:19,0:19:54.18:0,54,974	0/0:21,0:21:63.22:0,63,1172	0/0:43,0:43:99:0,126,2257	0/0:22,0:22:66.23:0,66,1198	1/1:0,6:6:12.04:294,12,0	1/1:0,11:11:12.04:294,12,0	0/0:19,0:19:57.19:0,57,1035	0/0:32,1:33:25.64:0,26,1654	0/0:32,0:32:96.28:0,96,1685	0/0:18,0:18:54.19:0,54,996
chr10	71148274	.	TTGTTG	T	2021.55	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=14.214;DP=686;FS=23.283;HRun=0;HaplotypeScore=149.2372;InbreedingCoeff=0.9103;MQ=59.01;MQ0=1;MQRankSum=-12.317;QD=13.48;ReadPosRankSum=0.514;VQSLOD=1.1691;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.31:0,90,2426	1/1:5,0:5:11.36:58,11,0	0/0:34,0:28:73.77:0,74,1484	0/0:32,0:28:63.08:0,63,1410	0/0:28,0:28:75.26:0,75,2071	0/0:23,0:23:63.20:0,63,1459	0/0:32,0:32:87.29:0,87,1974	0/0:34,0:34:95.88:0,96,1887	0/0:27,0:27:72.23:0,72,1925	1/1:20,3:23:48.27:543,48,0	1/1:16,0:16:40.99:425,41,0	0/0:30,0:30:81.28:0,81,1995	1/1:20,4:24:43.80:407,44,0	0/0:20,0:20:60.20:0,60,1460	0/0:27,0:27:78.26:0,78,1978	0/0:24,0:24:66.23:0,66,1739	0/0:33,0:33:93.32:0,93,2535	1/1:7,1:8:16.15:167,16,0	0/0:21,0:21:51.16:0,51,1103	0/0:23,0:23:66.23:0,66,1856	0/0:31,0:30:87.30:0,87,2291	0/0:22,0:22:60.20:0,60,1526	1/1:14,2:16:40.54:356,41,0	1/1:23,1:24:21.57:255,22,0	0/0:23,0:23:66.20:0,66,1762	0/1:34,0:34:8.52:9,0,1933	0/0:18,0:18:48.16:0,48,1379	0/0:20,0:20:48.16:0,48,1314
chr10	71148277	.	TTG	T	2687.49	PASS	AB=0.943;AC=15;AF=0.268;AN=56;BaseQRankSum=14.936;DP=689;FS=21.668;HRun=0;HaplotypeScore=105.8238;InbreedingCoeff=0.9002;MQ=59.35;MQ0=1;MQRankSum=-11.640;QD=18.16;ReadPosRankSum=1.050;VQSLOD=2.1556;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.30:0,90,1579	1/1:0,5:5:12.04:163,12,0	0/0:37,0:30:78.24:0,78,1267	0/0:35,0:31:71.58:0,72,1074	0/0:29,0:29:81.27:0,81,1395	0/0:21,0:21:63.20:0,63,1010	0/0:32,0:32:93.31:0,93,1505	0/0:33,0:33:89.54:0,90,1474	0/0:27,0:27:75.24:0,75,1285	1/1:7,17:24:58.29:649,58,0	1/1:4,11:15:38.22:449,38,0	0/0:30,0:30:87.29:0,87,1461	1/1:6,19:25:27.63:450,28,0	0/0:20,0:20:60.20:0,60,1030	0/0:27,0:27:78.26:0,78,1332	0/0:23,0:23:69.23:0,69,1215	0/0:34,0:34:99:0,99,1733	1/1:4,3:7:15.01:166,15,0	0/0:21,0:21:57.16:0,57,852	0/0:23,0:23:66.23:0,66,1178	0/0:34,0:33:99:0,99,1681	0/0:21,0:21:63.21:0,63,1087	1/1:6,9:15:42.10:511,42,0	1/1:8,16:24:36.25:458,36,0	0/0:24,0:24:68.06:0,68,1180	0/1:31,2:33:39.11:39,0,1265	0/0:18,0:18:51.17:0,51,901	0/0:19,0:19:48.16:0,48,862
chr10	71148279	.	G	GT	621.67	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.634;DP=686;FS=4.648;HRun=2;HaplotypeScore=102.2181;InbreedingCoeff=0.9101;MQ=59.30;MQ0=1;MQRankSum=-9.588;QD=5.22;ReadPosRankSum=-1.376;VQSLOD=0.1703;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.29:0,90,1161	1/1:5,0:5:1.77:4,2,0	0/0:36,0:29:78.18:0,78,1009	0/0:36,0:32:72.24:0,72,874	0/0:28,0:28:84.25:0,84,1066	0/0:22,0:22:63.19:0,63,802	0/0:32,0:32:93.30:0,93,1203	0/0:33,0:33:99:0,99,1236	0/0:26,0:26:75.23:0,75,958	1/1:25,0:25:34.81:231,35,0	1/1:17,0:17:9.76:109,10,0	0/0:30,0:30:90.28:0,90,1150	1/1:25,0:25:6.82:57,7,0	0/0:20,0:20:60.19:0,60,777	0/0:27,0:27:81.25:0,81,1036	0/0:23,0:23:69.22:0,69,895	0/0:36,0:36:99:0,102,1306	1/1:7,0:8:4.43:50,4,0	0/0:21,0:21:57.15:0,57,708	0/0:23,0:23:69.21:0,69,880	0/0:33,0:32:99:0,99,1281	0/0:21,0:21:63.20:0,63,815	1/1:15,0:15:16.64:148,17,0	1/1:21,3:24:19.83:197,20,0	0/0:24,0:24:68.05:0,68,876	0/0:30,1:31:55.59:0,56,1005	0/0:17,0:17:51.17:0,51,661	0/0:18,0:18:48.16:0,48,623
chr10	71148282	.	TTGTTG	T	2083.36	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.780;DP=699;FS=31.612;HRun=0;HaplotypeScore=150.9427;InbreedingCoeff=0.9894;MQ=59.74;MQ0=1;MQRankSum=-13.229;QD=17.66;ReadPosRankSum=0.928;VQSLOD=1.5827;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:82.65:0,83,2465	1/1:5,0:5:11.50:61,12,0	0/0:34,0:27:67.58:0,68,1599	0/0:39,0:35:83.76:0,84,1909	0/0:28,0:28:81.26:0,81,2238	0/0:21,0:21:57.19:0,57,1539	0/0:32,0:32:87.30:0,87,2488	0/0:36,0:36:81.28:0,81,2069	0/0:25,0:25:69.24:0,69,2031	1/1:22,3:25:47.99:591,48,0	1/1:16,1:17:40.55:361,41,0	0/0:30,0:30:84.27:0,84,2409	1/1:23,1:24:41.02:348,41,0	0/0:21,0:21:51.17:0,51,1329	0/0:27,0:27:75.22:0,75,2021	0/0:24,0:24:66.19:0,66,1657	0/0:36,0:36:99:0,108,3041	1/1:8,0:8:14.55:137,15,0	0/0:21,0:21:51.17:0,51,1246	0/0:23,0:23:69.24:0,69,1993	0/0:34,0:33:99:0,99,2849	0/0:23,0:23:63.20:0,63,1541	1/1:13,3:16:43.97:445,44,0	1/1:21,2:23:22.17:337,22,0	0/0:27,0:27:81.28:0,81,2119	0/0:31,0:31:23.89:0,24,1944	0/0:19,0:19:57.19:0,57,1554	0/0:17,0:17:45.15:0,45,1293
chr10	71148631	.	TG	T	1106.62	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.787;DP=721;FS=17.522;HRun=2;HaplotypeScore=70.6859;InbreedingCoeff=0.9996;MQ=85.32;MQ0=0;MQRankSum=-1.720;QD=30.74;ReadPosRankSum=-0.229;VQSLOD=1.8861;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1779	0/0:10,0:10:30.10:0,30,442	0/0:30,0:30:81.24:0,81,1126	0/0:16,0:16:38.91:0,39,508	0/0:24,0:24:72.19:0,72,1011	0/0:33,0:33:96.33:0,96,1435	0/0:19,0:19:57.13:0,57,770	0/0:33,0:33:96.33:0,96,1436	0/0:26,0:26:78.24:0,78,1129	0/0:30,0:30:90.20:0,90,1316	0/0:15,0:15:45.15:0,45,668	0/0:28,0:28:84.24:0,84,1197	0/0:27,0:27:78.24:0,78,1128	0/0:26,0:26:75.24:0,75,1102	0/0:36,0:36:99:0,105,1569	0/0:29,0:29:87.29:0,87,1285	0/0:30,0:30:90.25:0,90,1302	0/0:17,0:17:51.17:0,51,764	0/0:22,0:22:66.20:0,66,949	0/0:30,0:30:90.28:0,90,1323	0/0:32,0:32:93.30:0,93,1373	0/0:35,0:35:99:0,99,1460	0/0:31,0:31:90.29:0,90,1321	0/0:17,0:17:48.12:0,48,692	0/0:20,0:20:60.20:0,60,896	1/1:0,20:20:60.18:761,60,0	0/0:28,0:28:81.26:0,81,1187	1/1:0,16:16:36.12:467,36,0
chr10	71148803	.	G	GA	5751.50	PASS	AB=0.923;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.547;DP=779;FS=1.982;HRun=3;HaplotypeScore=79.0960;InbreedingCoeff=0.9096;MQ=67.29;MQ0=1;MQRankSum=-1.114;QD=31.26;ReadPosRankSum=4.984;VQSLOD=4.9553;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,141,1655	1/1:1,12:13:27.09:377,27,0	0/0:30,0:23:42.20:0,42,555	0/0:31,0:28:61.30:0,61,666	0/0:23,0:23:65.36:0,65,740	0/0:31,0:31:87.27:0,87,1043	0/0:28,0:28:81.25:0,81,970	0/0:33,0:33:86.12:0,86,952	0/0:23,0:23:66.17:0,66,768	1/1:0,29:29:87.28:1200,87,0	1/1:0,14:14:39.13:545,39,0	0/0:26,0:26:72.22:0,72,862	1/1:0,22:22:57.19:798,57,0	0/0:37,0:37:99:0,102,1198	0/0:42,0:42:99:0,117,1403	0/0:38,0:38:99:0,111,1318	0/0:34,0:34:99:0,99,1185	1/1:1,26:26:66.22:923,66,0	0/0:21,0:21:51.15:0,51,601	0/0:15,0:15:39.12:0,39,466	0/0:46,0:46:99:0,132,1543	0/0:21,0:21:60.17:0,60,707	1/1:0,19:19:45.15:629,45,0	1/1:2,34:36:90.30:1259,90,0	0/0:18,0:18:51.05:0,51,527	0/1:22,2:24:19.99:20,0,620	0/0:30,0:30:84.23:0,84,984	0/0:15,0:15:45.14:0,45,539
chr10	71149125	.	GCAGA	G	4129.32	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.609;DP=822;FS=12.388;HRun=0;HaplotypeScore=153.1743;InbreedingCoeff=0.9746;MQ=65.36;MQ0=3;MQRankSum=-1.065;QD=24.01;ReadPosRankSum=3.960;VQSLOD=2.9074;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,129,3032	1/1:1,14:15:36.12:643,36,0	0/0:33,0:25:59.16:0,59,1274	0/0:31,0:27:45.42:0,45,839	0/0:24,0:24:69.22:0,69,1581	0/0:26,0:26:66.23:0,66,1636	0/0:39,0:39:99:0,108,2391	0/0:28,0:27:66.19:0,66,1286	0/0:31,0:31:90.28:0,90,2081	1/1:2,24:26:72.18:1159,72,0	1/1:0,18:18:12:182,12,0	0/0:38,0:38:99:0,105,2468	1/1:1,23:24:36.12:643,36,0	0/0:31,0:31:84.27:0,84,1939	0/0:30,0:30:84.29:0,84,2043	0/0:24,0:24:72.25:0,72,1767	0/0:47,0:47:99:0,126,2828	1/1:5,27:32:51.17:914,51,0	0/0:18,0:18:49.40:0,49,1011	0/0:18,0:18:51.17:0,51,1042	0/0:64,0:64:99:0,184,4057	0/0:21,0:21:60.21:0,60,1377	1/1:1,19:20:5.97:108,6,0	1/1:6,31:37:27.09:480,27,0	0/0:27,0:27:75.20:0,75,1753	0/0:34,0:34:90.30:0,90,2094	0/0:22,0:22:63.22:0,63,1498	0/0:14,0:14:42.14:0,42,1084
chr10	71152765	.	G	GACAGCAAACCTATTGC	11308.72	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=0.979;DP=758;FS=13.761;HRun=0;HaplotypeScore=314.9970;InbreedingCoeff=0.8085;MQ=82.07;MQ0=1;MQRankSum=-11.522;QD=121.60;ReadPosRankSum=-1.723;VQSLOD=3.4994;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,5312	1/1:8,4:11:30.10:2000,30,0	0/0:25,0:25:60.07:0,60,2013	0/0:25,0:25:63.12:0,63,2079	0/0:13,0:13:36.12:0,36,1561	0/0:16,0:16:48.16:0,48,2062	0/0:40,0:40:99:0,111,4586	0/0:23,0:23:60.20:0,60,2037	0/0:14,0:13:33.10:0,33,1262	1/1:19,10:31:93.32:6001,93,0	1/1:11,7:19:54.18:3142,54,0	0/0:33,0:33:78.27:0,78,3473	0/0:32,0:32:93.32:0,93,4103	0/0:32,0:32:81.28:0,81,3478	0/0:34,0:34:84.27:0,84,3718	0/0:26,0:26:69.23:0,69,2699	0/0:48,0:48:99:0,141,5943	0/0:42,0:42:99:0,120,5467	0/0:26,0:26:69.18:0,69,2459	0/0:15,0:15:42.14:0,42,1841	0/0:53,0:52:99:0,154,6262	0/0:26,0:26:69.24:0,69,3112	0/0:24,0:24:69.21:0,69,2838	0/0:29,0:29:75.26:0,75,3215	0/0:20,0:20:54.17:0,54,2252	0/1:30,0:30:99:165,0,2598	0/0:22,0:22:63.22:0,63,2770	0/0:3,0:3:6.02:0,6,278
chr10	71153487	.	TA	T	1217.78	PASS	AB=0.864;AC=16;AF=0.286;AN=56;BaseQRankSum=7.249;DP=446;FS=1.065;HRun=12;HaplotypeScore=46.1028;InbreedingCoeff=0.5994;MQ=61.30;MQ0=6;MQRankSum=1.605;QD=7.61;ReadPosRankSum=1.711;VQSLOD=1.7071;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:69.14:0,69,700	0/1:7,1:9:5.21:5,0,128	0/0:8,0:5:8.93:0,9,70	0/0:8,0:5:5.75:0,6,43	0/0:15,1:18:15.67:0,16,326	0/0:22,2:25:10.43:0,10,438	0/0:16,0:16:42.08:0,42,426	0/0:25,0:20:47.93:0,48,471	0/0:14,1:15:9.83:0,10,281	0/1:13,3:16:10.41:10,0,263	0/0:13,0:12:21.04:0,21,213	0/0:14,0:14:24.05:0,24,244	1/1:2,17:19:47.81:371,48,0	0/0:14,0:14:36.07:0,36,366	0/0:13,0:13:33.95:0,34,337	0/0:14,0:14:33.06:0,33,329	0/0:18,2:20:45.07:0,45,449	1/1:9,9:20:21.96:147,22,0	0/1:19,3:20:23.84:24,0,293	0/0:11,0:12:29.86:0,30,278	0/1:8,2:10:31.46:31,0,69	0/0:5,0:5:15.03:0,15,152	1/1:4,9:13:17.16:133,17,0	1/1:2,6:9:16.97:122,17,0	0/0:15,1:16:39.07:0,39,390	1/1:8,16:24:44.80:348,45,0	0/0:12,1:12:4.49:0,4,190	1/1:7,10:17:10.39:214,10,0
chr10	71154165	.	CT	C	2434.02	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.660;DP=560;FS=6.752;HRun=9;HaplotypeScore=71.6782;InbreedingCoeff=0.9989;MQ=80.78;MQ0=0;MQRankSum=-0.299;QD=21.93;ReadPosRankSum=1.529;VQSLOD=4.5551;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1373	0/0:10,0:10:27.07:0,27,301	0/0:27,0:25:33.08:0,33,364	0/0:23,0:22:46.36:0,46,465	0/0:18,0:18:48.01:0,48,532	0/0:20,0:20:57.16:0,57,649	0/0:28,1:29:47.75:0,48,795	0/0:38,0:38:90.25:0,90,1029	0/0:13,0:14:42.08:0,42,470	0/0:20,0:20:57.17:0,57,653	0/0:11,0:11:23.94:0,24,257	0/0:15,0:15:45.11:0,45,501	1/1:2,16:18:42.02:384,42,0	0/0:19,1:20:29.70:0,30,587	0/0:13,0:13:33.10:0,33,381	0/0:25,0:25:72.20:0,72,822	0/0:15,0:15:42.12:0,42,484	1/1:2,16:18:45.02:412,45,0	0/0:16,0:16:42.12:0,42,485	0/0:11,0:11:30.09:0,30,346	0/0:24,1:25:66.14:0,66,743	0/0:15,0:15:37.35:0,37,418	1/1:0,14:14:39.02:357,39,0	1/1:0,21:21:54.03:494,54,0	0/0:26,0:26:72.17:0,72,816	1/1:4,25:29:46.40:673,46,0	0/0:16,0:16:45.10:0,45,505	1/1:0,11:11:33.02:302,33,0
chr10	71157079	.	TG	T	1726.02	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.725;DP=673;FS=0.000;HRun=1;HaplotypeScore=64.2143;InbreedingCoeff=0.9884;MQ=67.16;MQ0=0;MQRankSum=-2.695;QD=37.52;ReadPosRankSum=-0.115;VQSLOD=3.8074;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,118,1868	1/1:0,4:4:12:146,12,0	0/0:15,0:15:42.06:0,42,664	0/0:23,0:22:52.72:0,53,924	0/0:35,0:35:99:0,105,1658	0/0:27,0:27:81.28:0,81,1295	0/0:19,0:19:57.19:0,57,911	0/0:39,0:39:99:0,117,1850	0/0:17,0:17:51.16:0,51,786	1/1:0,24:24:72.24:1006,72,0	1/1:0,18:18:51.17:713,51,0	0/0:31,0:31:93.32:0,93,1487	0/0:16,0:16:48.16:0,48,767	0/0:31,0:31:93.30:0,93,1460	0/0:29,0:29:87.30:0,87,1391	0/0:22,0:22:66.19:0,66,1007	0/0:34,0:34:99:0,99,1556	0/0:22,0:22:66.21:0,66,1017	0/0:30,0:30:90.28:0,90,1393	0/0:28,0:28:84.29:0,84,1341	0/0:13,0:13:39.13:0,39,623	0/0:22,0:22:66.23:0,66,1055	0/0:25,0:25:72.25:0,72,1149	0/0:13,0:13:39.13:0,39,624	0/0:23,0:23:69.23:0,69,1093	0/0:22,1:23:27.25:0,27,991	0/0:33,0:33:99:0,99,1577	0/0:16,0:16:48.16:0,48,767
chr10	71158857	.	T	TGA	1055.11	PASS	AB=0.659;AC=3;AF=0.054;AN=56;BaseQRankSum=-5.428;DP=723;FS=4.642;HRun=0;HaplotypeScore=89.8085;InbreedingCoeff=-0.0253;MQ=82.88;MQ0=1;MQRankSum=0.659;QD=21.10;ReadPosRankSum=-2.359;VQSLOD=3.4150;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,150,1813	0/0:14,0:14:36.09:0,36,434	0/0:31,0:30:49.49:0,49,571	0/0:35,0:29:29.35:0,29,398	0/0:27,0:28:69.05:0,69,839	0/0:19,0:19:54.15:0,54,648	0/0:24,0:24:54.16:0,54,658	0/0:37,0:37:81.26:0,81,1010	0/0:28,0:28:69.19:0,69,837	0/0:32,0:32:81.24:0,81,983	0/0:21,0:21:48.14:0,48,587	0/0:30,0:30:75.24:0,75,937	0/0:28,0:28:75.09:0,75,891	0/0:21,0:21:57.18:0,57,711	0/0:19,0:20:47.98:0,48,577	0/0:26,0:26:75.22:0,75,912	0/0:24,0:24:60.18:0,60,736	0/1:5,9:14:15.47:276,0,15	0/0:14,0:14:27.08:0,27,326	0/0:23,0:23:45.13:0,45,545	0/0:46,0:48:93.07:0,93,1096	0/0:28,0:28:60.19:0,60,749	0/0:17,0:17:42.13:0,42,524	0/0:22,0:23:50.99:0,51,612	0/0:20,0:21:56.99:0,57,673	0/1:7,18:24:17.89:743,0,18	0/0:23,0:23:57.17:0,57,699	0/1:8,3:11:25.40:136,0,25
chr10	71161125	.	TGA	T	368.87	PASS	AB=0.893;AC=10;AF=0.192;AN=52;BaseQRankSum=3.270;DP=555;FS=0.000;HRun=0;HaplotypeScore=93.0175;InbreedingCoeff=-0.2061;MQ=68.97;MQ0=7;MQRankSum=0.551;QD=1.76;ReadPosRankSum=1.331;VQSLOD=1.7046;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,1:23:5.20:5,0,108	0/0:5,0:5:3:0,3,25	./.	./.	0/1:25,5:31:93.34:93,0,325	0/0:16,0:25:33.04:0,33,381	0/0:7,0:13:11.74:0,12,90	0/0:32,0:33:24.03:0,24,457	0/0:17,1:18:8.21:0,8,523	0/0:11,0:20:48.07:0,48,523	0/0:16,0:21:8.80:0,9,58	0/1:24,1:26:47:47,0,494	0/0:12,0:17:17.80:0,18,155	0/0:17,0:17:3.57:0,4,172	0/0:22,0:22:24.51:0,25,461	0/0:19,2:21:5.56:0,6,483	0/1:16,5:21:61.37:61,0,416	0/0:9,0:15:18.01:0,18,191	0/1:11,0:11:18.47:18,0,167	0/1:15,1:16:15.46:15,0,209	0/1:12,3:15:33.92:34,0,375	0/0:19,0:19:30.10:0,30,455	0/1:15,0:18:0.17:0,0,1	0/0:13,0:13:12:0,12,133	0/1:20,3:23:42.94:43,0,248	0/0:21,0:26:36.02:0,36,396	0/1:16,9:25:99:181,0,352	0/0:12,1:21:5.39:0,5,300
chr10	71161489	.	TTTTA	T	463.80	PASS	AB=0.940;AC=6;AF=0.136;AN=44;BaseQRankSum=4.751;DP=303;FS=1.248;HRun=0;HaplotypeScore=47.7750;InbreedingCoeff=0.3307;MQ=65.40;MQ0=1;MQRankSum=2.459;QD=7.60;ReadPosRankSum=1.739;VQSLOD=1.8407;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,9:18:27.09:421,27,0	0/0:1,0:2:3.01:0,3,52	./.	./.	0/1:10,1:11:40.72:41,0,65	0/0:13,0:13:24.08:0,24,565	0/0:7,0:8:12.04:0,12,245	0/0:37,0:36:27.09:0,27,541	0/0:8,0:8:6.02:0,6,141	0/0:10,0:12:6.02:0,6,105	./.	0/0:9,0:9:9.03:0,9,212	0/0:3,0:4:6.02:0,6,104	0/0:5,0:5:6.02:0,6,116	1/1:3,3:6:6.02:93,6,0	0/0:6,0:6:6.02:0,6,141	0/0:28,0:28:36.12:0,36,849	0/0:17,0:17:33.10:0,33,728	0/0:14,0:14:12.04:0,12,283	./.	0/0:12,0:12:6.02:0,6,120	./.	0/0:6,0:7:3.01:0,3,52	./.	0/0:13,0:13:18.06:0,18,378	0/0:12,0:13:18.06:0,18,388	0/0:9,0:9:15.05:0,15,313	0/1:25,1:26:28.71:29,0,190
chr10	71162282	.	T	TGGG	1756.40	PASS	AB=0.938;AC=19;AF=0.339;AN=56;BaseQRankSum=13.111;DP=616;FS=3.073;HRun=8;HaplotypeScore=103.7370;InbreedingCoeff=0.9431;MQ=79.43;MQ0=0;MQRankSum=-2.332;QD=9.70;ReadPosRankSum=-1.153;VQSLOD=-0.2686;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.02:0,90,1155	1/1:6,6:13:21.03:366,21,0	0/0:17,0:18:34.63:0,35,448	0/1:14,0:14:0.77:1,0,250	0/0:28,0:28:78.20:0,78,996	0/0:24,0:24:66.21:0,66,862	0/0:25,0:25:63.18:0,63,828	0/0:21,0:21:45.10:0,45,591	0/0:23,0:23:57.14:0,57,734	1/1:7,12:24:51.12:808,51,0	1/1:3,9:16:33.04:525,33,0	0/0:22,0:22:51.14:0,51,670	1/1:1,0:19:19.94:43,20,0	0/0:36,0:36:99:0,102,1340	0/0:21,0:21:51.13:0,51,670	0/0:25,0:25:72.22:0,72,932	0/0:16,0:16:45.14:0,45,591	1/1:4,0:33:32.39:70,32,0	0/0:23,0:23:51.12:0,51,658	0/0:32,0:32:78.20:0,78,1023	0/0:28,0:27:75.20:0,75,970	0/0:15,0:15:33.08:0,33,434	1/1:1,0:13:10.85:24,11,0	1/1:1,0:15:16.20:35,16,0	0/0:19,0:19:48.12:0,48,630	1/1:5,0:20:20.44:62,20,0	0/0:28,0:28:72.18:0,72,926	1/1:0,0:13:14.95:32,15,0
chr10	71163715	.	AG	A	660.56	PASS	AB=0.875;AC=7;AF=0.125;AN=56;BaseQRankSum=6.027;DP=570;FS=1.971;HRun=9;HaplotypeScore=62.8649;InbreedingCoeff=0.7460;MQ=75.50;MQ0=0;MQRankSum=-2.117;QD=13.21;ReadPosRankSum=0.225;VQSLOD=3.4096;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:33:46.31:0,46,274	1/1:0,7:7:17.98:165,18,0	0/0:23,0:23:51.41:0,51,514	0/0:24,0:23:20.41:0,20,324	0/0:21,2:23:5.27:0,5,563	0/0:23,0:23:60.18:0,60,689	0/0:27,0:27:72.21:0,72,826	0/0:15,1:16:8.61:0,9,330	0/0:21,0:21:57.17:0,57,657	1/1:4,14:18:48.01:434,48,0	1/1:3,8:11:21.01:192,21,0	0/0:40,0:40:99:0,105,1177	0/0:13,0:13:13.45:0,13,380	0/0:16,0:16:45.12:0,45,509	0/0:20,0:20:54.16:0,54,622	0/0:14,0:14:39.09:0,39,430	0/0:28,0:28:77.81:0,78,908	0/0:24,0:24:69.19:0,69,786	0/0:20,0:20:48.07:0,48,517	0/0:10,0:10:30.08:0,30,337	0/0:24,2:26:14.25:0,14,662	0/0:20,0:20:54.16:0,54,620	0/0:11,1:13:5.53:0,6,291	0/0:23,0:23:63.19:0,63,727	0/0:31,2:34:29.55:0,30,803	0/0:23,0:23:35.55:0,36,613	0/1:12,2:14:15.81:16,0,337	0/0:6,0:6:18.05:0,18,208
chr10	71164090	.	A	AG	1415.50	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.497;DP=460;FS=3.625;HRun=7;HaplotypeScore=47.7158;InbreedingCoeff=0.9677;MQ=82.48;MQ0=0;MQRankSum=-0.373;QD=25.74;ReadPosRankSum=1.486;VQSLOD=4.2829;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:64.53:0,65,809	0/0:4,0:4:9.01:0,9,87	0/0:14,0:14:21.88:0,22,219	0/0:18,0:18:27.47:0,27,373	0/0:18,0:18:54.07:0,54,515	0/0:14,0:14:42.03:0,42,393	0/0:20,0:20:57.09:0,57,550	0/0:20,0:20:45.05:0,45,427	0/0:11,0:11:30.05:0,30,290	0/0:14,0:14:36.06:0,36,347	0/0:10,0:10:30.04:0,30,286	0/0:17,0:17:51.07:0,51,487	1/1:0,18:18:54.17:652,54,0	0/0:14,0:14:42.07:0,42,404	0/0:18,0:18:51.08:0,51,492	0/0:16,0:16:44.94:0,45,417	0/0:25,0:25:75.11:0,75,719	0/0:18,0:18:48.05:0,48,457	0/0:15,0:15:39.05:0,39,373	0/0:10,0:10:26.96:0,27,244	0/0:25,0:25:60.08:0,60,575	0/0:20,0:20:51.03:0,51,478	1/1:1,14:15:35.94:435,36,0	1/1:5,17:22:39.12:471,39,0	0/0:18,0:18:48.06:0,48,457	0/0:13,0:13:36.05:0,36,347	0/0:11,0:11:14.13:0,14,265	0/0:6,0:6:18.03:0,18,174
chr10	71165699	.	T	TCAGTAGTCGCTTGTGGGACC	30501.69	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=4.276;DP=587;FS=13.563;HRun=0;HaplotypeScore=289.2731;InbreedingCoeff=0.9977;MQ=85.95;MQ0=0;MQRankSum=-15.183;QD=202.00;ReadPosRankSum=1.402;VQSLOD=3.9456;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.27:0,78,3769	1/1:4,5:9:24.08:2088,24,0	0/0:26,0:26:70.12:0,70,2793	0/0:18,0:18:54.18:0,54,2252	0/0:21,0:21:60.21:0,60,3365	0/0:17,0:17:48.16:0,48,2442	0/0:27,0:27:75.23:0,75,3442	0/0:32,0:32:87.29:0,87,3893	0/0:26,0:26:75.26:0,75,3925	1/1:20,4:30:90.28:6038,90,0	1/1:10,2:14:33.07:2158,33,0	0/0:23,0:23:63.21:0,63,3140	1/1:21,8:30:81.28:6225,81,0	0/0:27,0:27:78.27:0,78,3737	0/0:30,0:30:87.30:0,87,4399	0/0:31,0:31:93.32:0,93,4524	0/0:23,0:23:66.23:0,66,3066	1/1:7,0:7:18.06:1282,18,0	0/0:20,0:20:60.20:0,60,2804	0/0:17,0:17:45.15:0,45,2237	0/0:21,0:21:54.19:0,54,2713	0/0:15,0:15:45.15:0,45,2327	1/1:7,2:9:21.06:1563,21,0	1/1:15,4:19:42.14:3318,42,0	0/0:13,0:13:39.12:0,39,1774	1/1:15,7:22:60.21:5226,60,0	0/0:22,0:21:66.23:0,66,3455	1/1:8,3:11:33.11:2604,33,0
chr10	71165771	.	C	CA	1439.35	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=3.083;DP=593;FS=14.196;HRun=10;HaplotypeScore=70.6500;InbreedingCoeff=0.8556;MQ=71.17;MQ0=4;MQRankSum=-0.476;QD=11.51;ReadPosRankSum=0.329;VQSLOD=1.3572;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:86.77:0,87,703	0/0:9,0:9:23.95:0,24,197	0/0:20,0:17:19:0,19,119	0/1:26,0:21:21.94:22,0,99	0/0:21,0:21:50.88:0,51,412	0/0:21,0:21:53.92:0,54,443	0/0:21,0:21:50.90:0,51,414	0/0:29,2:31:42.92:0,43,559	0/0:23,0:23:59.89:0,60,489	0/0:31,0:33:81.98:0,82,652	0/0:19,0:19:47.93:0,48,394	0/0:24,0:24:59.91:0,60,492	1/1:10,13:23:54.57:563,55,0	0/0:24,0:24:50.90:0,51,419	0/0:23,0:23:53.89:0,54,440	0/0:22,0:22:31.99:0,32,413	0/0:20,0:22:55.83:0,56,449	1/1:2,1:13:2.85:94,3,0	0/0:23,0:23:59.92:0,60,490	0/0:13,0:13:32.94:0,33,270	0/0:23,0:22:59.90:0,60,488	0/0:20,0:20:53.92:0,54,443	1/1:4,15:19:20.73:423,21,0	1/1:5,10:15:24.06:256,24,0	0/0:9,0:10:20.01:0,20,154	1/1:9,0:14:34.77:194,35,0	0/0:31,0:31:77.86:0,78,640	1/1:3,0:13:14.20:70,14,0
chr10	71166663	.	AGC	A	461.21	PASS	AB=0.835;AC=11;AF=0.196;AN=56;BaseQRankSum=7.438;DP=576;FS=12.044;HRun=0;HaplotypeScore=100.3841;InbreedingCoeff=0.5546;MQ=51.44;MQ0=25;MQRankSum=-2.499;QD=4.43;ReadPosRankSum=-0.633;VQSLOD=1.7476;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:53.58:0,54,745	0/0:10,0:9:4.59:0,5,50	0/0:15,0:2:3.01:0,3,37	0/0:27,0:2:5.93:0,6,49	0/1:22,1:23:1:1,0,584	0/0:19,0:16:40.38:0,40,677	0/0:23,0:22:54.09:0,54,893	0/0:34,0:30:58.35:0,58,1141	0/0:23,0:23:66.21:0,66,1147	0/0:33,0:30:43.39:0,43,299	0/0:19,0:17:11.64:0,12,67	0/0:20,0:20:50.22:0,50,784	1/1:9,1:10:20.35:171,20,0	0/0:19,0:19:42.14:0,42,774	0/0:26,0:25:56.96:0,57,843	0/0:25,0:25:62.44:0,62,1151	0/0:23,0:22:58.40:0,58,1051	1/1:11,0:11:28.64:204,29,0	0/0:17,0:13:28.35:0,28,551	0/0:20,0:20:51.62:0,52,840	0/0:23,0:21:42.36:0,42,750	0/0:17,0:16:33.89:0,34,710	1/1:10,2:12:10.31:149,10,0	0/1:4,19:23:38.95:39,0,65	0/0:22,0:21:45.76:0,46,794	0/1:17,0:17:42.69:43,0,126	0/0:34,0:32:87.19:0,87,1521	1/1:8,0:7:1.82:5,2,0
chr10	71166665	.	CGAGCGAGAGAGAGAGAGA	C	1135.87	PASS	AB=0.887;AC=10;AF=0.192;AN=52;BaseQRankSum=8.680;DP=580;FS=0.000;HRun=0;HaplotypeScore=236.8603;InbreedingCoeff=0.4209;MQ=51.12;MQ0=27;MQRankSum=-0.937;QD=10.14;ReadPosRankSum=-0.866;VQSLOD=2.2761;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:47.81:0,48,1807	1/1:2,8:9:6.02:243,6,0	./.	./.	0/0:23,0:23:37.45:0,37,1285	0/0:21,0:17:42.51:0,43,1638	0/0:23,0:22:47.86:0,48,956	0/0:36,0:32:84.20:0,84,1200	0/0:23,0:23:59.94:0,60,2002	1/1:6,27:30:68.55:691,69,0	1/1:3,15:16:9.03:225,9,0	0/0:22,0:22:50.21:0,50,1102	0/1:10,0:10:20.24:20,0,154	0/0:18,0:18:41.95:0,42,1435	0/0:26,0:25:57.05:0,57,2117	0/0:24,0:25:68.73:0,69,2085	0/0:24,0:22:56.64:0,57,2650	0/1:10,0:11:8.37:8,0,146	0/0:17,0:14:35.87:0,36,1013	0/0:19,0:19:47.58:0,48,1902	0/0:24,0:22:51.10:0,51,2251	0/0:17,0:16:42.07:0,42,1662	0/1:13,0:13:74.90:75,0,121	0/0:23,0:24:5.81:0,6,158	0/0:22,0:21:47.89:0,48,872	0/1:2,0:17:20.45:20,0,690	0/0:32,0:30:85.17:0,85,3171	0/0:2,0:6:3.01:0,3,67
chr10	71166667	.	AGC	A	1213.20	PASS	AB=1.000;AC=19;AF=0.365;AN=52;BaseQRankSum=11.195;DP=573;FS=4.204;HRun=0;HaplotypeScore=100.0880;InbreedingCoeff=0.6744;MQ=51.02;MQ0=27;MQRankSum=0.433;QD=6.63;ReadPosRankSum=0.818;VQSLOD=3.2507;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:11.58:12,0,172	1/1:10,0:9:5.92:39,6,0	./.	./.	0/1:22,0:22:7.43:7,0,184	0/0:22,0:18:25.06:0,25,404	0/0:21,0:20:34.54:0,35,456	0/0:37,0:33:74.28:0,74,616	0/0:22,0:22:59.77:0,60,667	1/1:31,1:29:27.09:361,27,0	1/1:17,0:15:8.79:52,9,0	0/0:23,0:23:22.94:0,23,490	1/1:8,1:9:9.31:141,9,0	0/0:18,0:18:41.85:0,42,440	0/0:26,0:25:32.25:0,32,331	0/0:25,0:25:57.47:0,57,629	0/0:25,0:23:28.88:0,29,697	1/1:9,1:10:29.63:224,30,0	0/0:18,0:14:13.73:0,14,252	0/0:19,0:19:23.73:0,24,485	0/0:23,1:22:27.78:0,28,495	0/0:17,0:16:5.93:0,6,341	1/1:12,1:13:10.72:154,11,0	0/1:24,0:24:15.44:42,0,15	0/0:23,0:22:44.50:0,45,339	1/1:16,0:16:43.20:347,43,0	0/0:32,0:30:83.21:0,83,940	1/1:8,0:6:2.99:23,3,0
chr10	71166669	.	C	CGA	416.71	PASS	AB=0.938;AC=9;AF=0.173;AN=52;BaseQRankSum=0.073;DP=566;FS=11.078;HRun=0;HaplotypeScore=103.9126;InbreedingCoeff=0.1696;MQ=50.67;MQ0=27;MQRankSum=0.164;QD=3.39;ReadPosRankSum=-2.877;VQSLOD=0.8418;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:21:19.53:0,20,91	0/0:9,0:8:2.88:0,3,15	./.	./.	1/1:21,0:21:5.48:27,5,0	0/0:21,0:18:6.39:0,6,129	0/0:18,0:19:14.87:0,15,145	0/0:36,0:34:9.57:0,10,93	0/0:20,0:20:21.06:0,21,230	0/0:31,0:28:8.31:0,8,61	0/0:17,0:15:0.47:0,0,1	0/0:21,0:23:23.64:0,24,225	0/1:9,0:9:16.05:56,0,16	0/0:18,0:18:3:0,3,33	0/1:14,12:26:16.85:329,0,17	0/0:22,0:23:27.22:0,27,247	0/0:26,0:24:11.62:0,12,257	1/1:9,0:9:11.52:55,12,0	0/0:16,0:13:2.44:0,2,71	0/0:21,0:21:20.22:0,20,191	0/1:24,0:22:15.37:15,0,199	0/1:17,0:16:21.11:21,0,50	0/0:14,0:14:3.15:0,3,12	0/0:24,0:24:5.83:0,6,42	0/0:16,0:21:5.68:0,6,28	0/1:16,0:16:7.16:46,0,7	0/0:32,0:30:29.65:0,30,320	0/0:8,0:6:2.22:0,2,7
chr10	71166826	.	CT	C	1954.70	PASS	AB=0.960;AC=13;AF=0.232;AN=56;BaseQRankSum=8.606;DP=647;FS=0.000;HRun=10;HaplotypeScore=69.8461;InbreedingCoeff=0.8602;MQ=61.59;MQ0=19;MQRankSum=2.822;QD=13.30;ReadPosRankSum=3.255;VQSLOD=3.6691;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:73.75:0,74,800	0/0:10,0:10:27.03:0,27,285	0/1:22,1:7:15.30:15,0,43	0/0:19,1:10:8.77:0,9,46	0/0:34,1:34:61.20:0,61,881	0/0:20,0:22:47.96:0,48,512	0/0:16,0:15:36.10:0,36,398	0/0:40,1:41:67.17:0,67,949	0/0:17,0:17:31.27:0,31,404	0/0:30,0:30:66.14:0,66,709	0/0:17,0:17:38.88:0,39,402	0/0:22,0:22:51.10:0,51,550	1/1:1,17:18:44.99:391,45,0	0/0:18,0:17:24.54:0,25,267	0/0:17,0:16:45.12:0,45,496	0/0:10,0:9:24.06:0,24,265	0/0:48,0:46:99:0,124,1329	1/1:3,27:30:62.97:547,63,0	0/0:32,0:26:56.92:0,57,576	0/0:20,0:22:50.77:0,51,532	0/0:13,0:13:33.02:0,33,339	0/0:15,0:14:30.07:0,30,324	1/1:3,15:18:38.97:339,39,0	1/1:2,18:18:8.81:305,9,0	0/0:28,0:28:75.20:0,75,824	1/1:6,19:23:8.09:411,8,0	0/0:33,0:33:84.63:0,85,892	1/1:4,8:12:14.99:130,15,0
chr10	71167947	.	AGT	A	1347.84	PASS	AB=0.888;AC=21;AF=0.375;AN=56;BaseQRankSum=11.148;DP=658;FS=3.993;HRun=0;HaplotypeScore=89.8144;InbreedingCoeff=-0.0141;MQ=67.90;MQ0=10;MQRankSum=-0.753;QD=3.61;ReadPosRankSum=1.829;VQSLOD=2.1104;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,28:42:13.20:676,13,0	1/1:3,0:11:22.73:112,23,0	0/0:24,0:16:12.03:0,12,166	0/0:31,0:18:11.99:0,12,138	0/1:24,3:26:47.22:47,0,692	0/1:23,2:26:26.61:27,0,668	0/0:27,1:28:13.32:0,13,645	0/0:31,1:33:2.16:0,2,653	0/1:12,3:15:36.54:37,0,388	1/1:3,0:18:42.61:210,43,0	1/1:3,0:19:22.52:111,23,0	0/1:14,2:16:4.72:5,0,367	0/1:29,6:35:90.08:90,0,945	0/1:18,3:21:56.32:56,0,556	0/0:23,0:23:42.14:0,42,656	0/1:15,4:18:7.74:8,0,347	0/0:20,1:21:13.34:0,13,667	0/1:12,1:19:11.76:12,0,286	0/1:15,1:16:16.68:17,0,194	0/0:20,3:23:25.38:0,25,855	0/0:30,4:33:5.37:0,5,908	0/1:17,3:20:62.35:62,0,450	0/1:16,2:18:24.54:25,0,537	0/0:28,0:27:60.18:0,60,913	0/1:20,3:23:18.48:18,0,649	0/0:13,0:32:62.97:0,63,567	0/1:25,2:27:12.47:12,0,703	0/0:5,0:8:12.01:0,12,126
chr10	71173058	.	AG	A	4046.92	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=8.893;DP=626;FS=3.950;HRun=2;HaplotypeScore=67.8945;InbreedingCoeff=0.9136;MQ=79.29;MQ0=3;MQRankSum=0.065;QD=24.83;ReadPosRankSum=3.435;VQSLOD=3.4492;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:39:83.94:1226,84,0	1/1:0,12:12:27.09:348,27,0	0/1:38,0:25:7.32:7,0,505	0/0:26,0:16:20.33:0,20,257	0/0:30,0:30:86.40:0,86,1111	0/0:20,0:20:56.67:0,57,749	0/0:21,0:21:57.16:0,57,794	0/0:33,0:33:89.81:0,90,1274	0/0:25,0:25:75.20:0,75,1039	1/1:0,24:24:72.16:841,72,0	1/1:0,17:17:45.92:545,46,0	0/0:19,0:19:57.15:0,57,774	0/0:16,0:16:48.12:0,48,656	0/0:17,0:17:48.12:0,48,656	0/0:29,0:29:87.23:0,87,1199	0/0:20,0:20:54.16:0,54,767	0/0:29,0:29:87.28:0,87,1276	1/1:0,16:16:45.15:581,45,0	0/0:24,0:24:69.09:0,69,904	0/0:24,0:24:66.08:0,66,879	0/0:18,0:19:54.16:0,54,762	0/0:15,0:15:42.12:0,42,586	0/0:16,0:16:45.09:0,45,591	0/0:27,0:27:66.22:0,66,979	1/1:2,15:17:35.13:498,35,0	0/0:22,0:22:63.67:0,64,904	0/0:17,0:16:51.14:0,51,720	0/0:13,0:13:39.12:0,39,551
chr10	71173060	.	GA	G	953.32	PASS	AB=0.992;AC=11;AF=0.196;AN=56;BaseQRankSum=12.099;DP=649;FS=2.324;HRun=9;HaplotypeScore=84.5116;InbreedingCoeff=0.6577;MQ=79.70;MQ0=4;MQRankSum=0.727;QD=5.54;ReadPosRankSum=4.313;VQSLOD=0.8201;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:40:49.56:364,50,0	1/1:12,0:12:25.52:129,26,0	0/1:38,1:26:31.13:31,0,241	0/0:28,0:17:16.77:0,17,155	0/0:33,0:33:75.15:0,75,829	0/0:18,1:19:20.68:0,21,492	0/0:18,0:19:50.97:0,51,559	0/0:33,1:34:59.24:0,59,901	0/0:27,0:27:72.15:0,72,800	0/1:27,0:27:29.45:115,0,29	1/1:18,0:18:36.06:164,36,0	0/0:19,0:19:48.13:0,48,544	0/0:16,0:16:39.11:0,39,449	0/0:16,0:16:42.10:0,42,466	0/0:27,0:27:72.20:0,72,820	0/0:18,0:18:48.13:0,48,544	0/0:31,0:31:90.24:0,90,1018	1/1:17,0:17:42.21:202,42,0	0/0:23,0:24:53.84:0,54,603	0/0:22,0:23:60:0,60,659	0/0:20,0:20:51.14:0,51,578	0/0:18,0:18:45.10:0,45,493	0/0:19,0:19:39.09:0,39,429	0/0:27,0:27:69.18:0,69,784	0/1:19,0:19:59.62:122,0,60	0/0:23,1:24:38.71:0,39,683	0/0:18,0:17:48.12:0,48,540	0/0:16,0:16:45.04:0,45,462
chr10	71173078	.	G	GA	1267.88	PASS	AB=0.802;AC=7;AF=0.125;AN=56;BaseQRankSum=-6.098;DP=629;FS=1.785;HRun=9;HaplotypeScore=79.2810;InbreedingCoeff=0.6064;MQ=67.91;MQ0=4;MQRankSum=-0.530;QD=12.81;ReadPosRankSum=0.563;VQSLOD=3.5963;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:39:75.88:0,76,762	0/1:9,2:11:24.01:24,0,155	0/1:26,0:12:3.26:3,0,77	0/0:24,0:10:18.79:0,19,133	0/0:28,1:29:23.71:0,24,424	0/0:22,0:24:66.98:0,67,545	0/0:18,0:18:46.76:0,47,388	0/0:36,0:36:65.93:0,66,564	0/0:23,0:23:54.82:0,55,460	0/0:24,0:24:62.95:0,63,540	0/0:22,0:22:53.96:0,54,464	0/0:16,0:16:44.99:0,45,391	1/1:4,10:14:27.07:299,27,0	0/0:13,0:13:29.36:0,29,242	0/0:26,0:26:65.97:0,66,570	0/0:19,0:20:27:0,27,396	0/0:31,0:31:80.98:0,81,703	0/0:13,0:13:35.93:0,36,301	0/0:31,1:32:38.75:0,39,564	0/0:19,0:20:49.99:0,50,419	0/0:15,1:16:8.81:0,9,305	0/0:16,0:16:35.99:0,36,312	0/1:4,15:19:2.58:376,0,3	1/1:2,27:29:43.15:704,43,0	0/0:22,0:22:56.96:0,57,490	0/0:24,0:25:28.91:0,29,468	0/0:21,0:20:44.95:0,45,387	0/0:20,0:20:56.90:0,57,484
chr10	71175270	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTG	C	327.14	PASS	AB=1.000;AC=10;AF=0.192;AN=52;BaseQRankSum=0.329;DP=416;FS=2.646;HRun=0;HaplotypeScore=152.8845;InbreedingCoeff=0.3223;MQ=35.50;MQ0=102;MQRankSum=4.303;QD=3.24;ReadPosRankSum=-3.176;VQSLOD=1.8357;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:17:21.52:0,22,822	0/0:5,0:2:3.01:0,3,150	./.	0/0:8,0:2:2.04:0,2,6	./.	0/0:16,0:14:26.30:0,26,1477	0/0:15,0:10:18.32:0,18,531	0/0:32,0:29:67.94:0,68,2219	0/0:11,0:9:12.02:0,12,304	0/0:25,0:22:34.71:0,35,2322	1/1:9,0:8:2.92:17,3,0	0/0:14,0:10:11.93:0,12,624	1/1:17,0:13:3.41:224,3,0	0/1:12,0:10:27.12:27,0,286	0/1:10,0:8:0.90:1,0,398	0/1:12,0:9:11.46:11,0,502	0/0:16,0:12:22.75:0,23,587	0/0:13,0:11:24.83:0,25,612	0/0:10,0:6:18.05:0,18,690	0/0:14,0:11:12.93:0,13,425	0/0:31,0:20:17.97:0,18,982	0/0:10,0:8:9.03:0,9,549	0/0:6,5:9:2.99:0,3,23	1/1:26,0:18:11.99:170,12,0	0/0:9,0:6:3.01:0,3,53	0/1:15,0:8:5.83:6,0,736	0/0:19,0:16:25:0,25,987	0/0:17,0:5:14.27:0,14,339
chr10	71175298	.	CTGTG	C	981.52	PASS	AB=1.000;AC=20;AF=0.370;AN=54;BaseQRankSum=4.113;DP=433;FS=31.695;HRun=0;HaplotypeScore=67.8357;InbreedingCoeff=0.4478;MQ=40.04;MQ0=79;MQRankSum=2.589;QD=4.50;ReadPosRankSum=1.911;VQSLOD=-0.4193;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:19:18.05:195,18,0	1/1:6,0:3:6.02:78,6,0	0/0:2,0:1:3.01:0,3,30	./.	0/0:12,0:10:6.49:0,6,95	0/0:14,0:12:17.91:0,18,242	0/0:15,0:12:16.67:0,17,244	0/0:21,0:20:9.03:0,9,117	0/0:13,0:12:9.92:0,10,143	1/1:14,6:19:15.02:218,15,0	1/1:6,5:11:3.01:34,3,0	0/1:14,0:11:0.46:0,0,1	1/1:20,0:16:7.41:93,7,0	0/1:11,0:10:36.01:36,0,41	0/0:10,0:10:14.88:0,15,203	0/0:14,0:13:21.07:0,21,330	0/0:17,0:13:8.87:0,9,113	1/1:14,0:12:11.16:130,11,0	0/0:14,0:11:3.49:0,3,120	0/0:13,0:11:12:0,12,189	0/0:35,0:26:20.96:0,21,255	0/1:14,0:13:38.68:45,0,39	0/1:18,0:15:39.19:39,0,84	0/1:28,0:20:0.15:2,0,0	1/1:15,0:12:18.06:263,18,0	0/0:23,0:16:11.48:0,11,226	0/1:19,0:16:21.81:22,0,158	0/0:12,0:5:7.74:0,8,85
chr10	71176175	.	T	TA	3593.43	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.992;DP=576;FS=4.454;HRun=8;HaplotypeScore=90.6448;InbreedingCoeff=0.9715;MQ=67.69;MQ0=0;MQRankSum=-3.797;QD=20.65;ReadPosRankSum=0.470;VQSLOD=3.5609;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:21:46.02:521,46,0	1/1:0,9:9:27:286,27,0	0/0:24,0:22:39.17:0,39,366	0/0:15,0:10:3.24:0,3,78	0/0:24,0:24:59.70:0,60,529	0/0:18,0:17:47.96:0,48,430	0/0:16,0:16:42.02:0,42,384	0/0:26,0:26:63:0,63,569	0/0:20,0:20:51.01:0,51,466	1/1:11,18:29:33.88:556,34,0	1/1:3,19:23:59.97:657,60,0	0/0:16,0:16:45.01:0,45,407	1/1:2,0:19:45.31:231,45,0	0/0:16,0:16:41.94:0,42,374	0/0:20,1:21:22.33:0,22,450	0/0:19,0:19:48.02:0,48,439	0/0:32,0:31:75.03:0,75,686	1/1:4,15:17:36.07:401,36,0	0/0:24,0:23:51.01:0,51,467	0/0:19,0:19:54.03:0,54,494	0/0:15,0:15:42.02:0,42,384	0/0:13,0:13:33.02:0,33,302	1/1:1,0:23:56.69:301,57,0	1/1:1,0:10:17.04:87,17,0	1/1:0,20:20:48.14:553,48,0	0/0:38,1:39:67.39:0,67,857	0/0:32,0:32:86.81:0,87,766	0/0:12,0:12:35.98:0,36,317
chr10	71176349	.	A	AG	4057	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-5.241;DP=502;FS=0.000;HRun=2;HaplotypeScore=49.4639;InbreedingCoeff=0.9886;MQ=83.71;MQ0=0;MQRankSum=-1.498;QD=34.68;ReadPosRankSum=3.019;VQSLOD=3.7043;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,45:47:99:1674,117,0	1/1:0,10:10:24.03:320,24,0	0/0:23,0:22:42.56:0,43,484	0/0:19,0:18:25.70:0,26,386	0/0:11,0:11:33.10:0,33,398	0/0:8,0:8:18.06:0,18,223	0/0:22,0:22:66.14:0,66,775	0/0:19,0:19:48.14:0,48,584	0/0:20,0:20:57.15:0,57,682	1/1:1,9:10:27.09:387,27,0	1/1:1,16:17:42.06:577,42,0	0/0:20,0:20:54.15:0,54,645	0/0:15,0:15:45.12:0,45,532	0/0:19,0:19:54.16:0,54,656	0/0:12,0:12:36.11:0,36,446	0/0:15,0:15:45.12:0,45,535	0/0:27,0:27:75.14:0,75,884	1/1:1,16:17:42.11:581,42,0	0/0:19,0:19:54.15:0,54,635	0/0:16,0:16:45.13:0,45,547	0/0:34,0:34:99:0,99,1202	0/0:11,0:11:27.07:0,27,323	0/0:11,0:11:27.04:0,27,307	0/0:20,0:20:57.18:0,57,706	1/1:0,16:16:36.12:518,36,0	0/0:20,1:21:16.86:0,17,631	0/0:18,0:18:54.16:0,54,651	0/0:4,0:4:12.04:0,12,148
chr10	71176435	.	CCG	C	770.95	PASS	AB=0.990;AC=11;AF=0.196;AN=56;BaseQRankSum=5.511;DP=315;FS=1.838;HRun=0;HaplotypeScore=54.7044;InbreedingCoeff=0.3183;MQ=80.80;MQ0=1;MQRankSum=0.056;QD=9.07;ReadPosRankSum=4.401;VQSLOD=3.1844;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:72.53:73,0,81	0/1:3,0:3:12.85:15,0,13	0/0:21,0:17:35.41:0,35,381	0/0:9,0:8:18.01:0,18,171	0/0:7,0:7:20.92:0,21,192	0/0:5,0:5:12:0,12,137	0/0:14,0:14:26.67:0,27,278	0/0:10,0:10:26.97:0,27,276	0/0:16,0:16:43.64:0,44,536	0/1:19,1:20:40.08:154,0,40	0/1:7,0:7:41.84:44,0,42	0/0:16,0:16:43.17:0,43,351	1/1:8,3:11:23.26:235,23,0	0/0:14,0:14:38.56:0,39,338	0/0:7,0:7:18.90:0,19,201	0/0:12,0:13:36.68:0,37,398	0/0:21,0:21:56.91:0,57,686	0/0:12,0:12:2.76:0,3,127	0/0:7,0:7:11.49:0,11,134	0/0:6,0:6:2.37:0,2,46	0/0:17,0:17:38.83:0,39,437	0/0:9,0:9:23.72:0,24,294	1/1:1,1:2:2.13:47,2,0	1/1:8,4:12:29.30:333,29,0	0/1:13,0:13:26.28:26,0,65	0/0:14,0:14:32.34:0,32,460	0/0:8,0:8:17.75:0,18,209	0/0:4,0:4:12:0,12,135
chr10	71176436	.	CGG	C	1142.50	PASS	AB=0.922;AC=15;AF=0.268;AN=56;BaseQRankSum=1.798;DP=325;FS=16.131;HRun=10;HaplotypeScore=54.6102;InbreedingCoeff=0.4140;MQ=81.32;MQ0=1;MQRankSum=0.097;QD=10.11;ReadPosRankSum=5.248;VQSLOD=0.0567;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,11:16:33.03:354,33,0	1/1:2,1:3:6.01:65,6,0	0/0:22,0:18:32.56:0,33,360	0/0:7,0:8:14.39:0,14,148	0/0:8,0:8:15.02:0,15,184	0/0:5,0:5:6:0,6,73	0/0:13,0:15:26.58:0,27,364	0/0:9,0:9:9.03:0,9,141	0/0:17,0:17:44.95:0,45,613	1/1:4,16:20:45.05:467,45,0	1/1:2,4:6:1.54:90,2,0	0/0:16,0:17:29.05:0,29,346	0/1:11,0:11:38.44:48,0,38	0/0:15,0:15:27.07:0,27,364	0/0:6,0:6:12.88:0,13,160	0/0:13,0:14:35.56:0,36,471	0/0:21,0:21:45.12:0,45,654	0/1:6,2:12:39.03:39,0,113	0/0:7,0:7:8.75:0,9,83	0/0:5,0:6:2.48:0,2,9	0/0:16,0:18:26.01:0,26,293	0/0:9,0:9:15.04:0,15,216	0/1:3,0:3:12.61:13,0,32	0/1:13,0:13:22.82:94,0,23	1/1:6,5:13:8.61:137,9,0	0/1:15,1:16:3.38:3,0,351	0/0:10,0:10:20.36:0,20,222	0/0:4,0:4:6.02:0,6,91
chr10	71176749	.	GA	G	1077.80	PASS	AB=0.893;AC=23;AF=0.411;AN=56;BaseQRankSum=5.702;DP=585;FS=4.978;HRun=13;HaplotypeScore=73.5342;InbreedingCoeff=0.1949;MQ=71.01;MQ0=3;MQRankSum=-0.121;QD=2.99;ReadPosRankSum=4.450;VQSLOD=-0.2514;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:44:54.95:159,55,0	1/1:2,4:7:10.97:72,11,0	0/0:35,0:15:15.98:0,16,82	0/1:36,1:25:0.55:1,0,156	0/0:8,0:8:15.90:0,16,143	0/0:22,2:24:25.78:0,26,379	0/0:20,1:21:29.17:0,29,445	0/1:24,4:27:20.85:21,0,284	0/0:16,2:18:1.38:0,1,324	1/1:8,13:24:48.71:323,49,0	1/1:3,8:12:25.88:181,26,0	0/0:18,2:20:0.36:0,0,320	0/0:14,0:17:34.73:0,35,212	0/0:17,1:19:14.43:0,14,274	0/1:16,2:18:0.72:1,0,323	0/1:17,3:21:20.86:21,0,271	0/1:25,1:27:15.52:16,0,350	1/1:6,11:20:29.96:193,30,0	0/1:16,4:20:35.73:36,0,328	0/1:14,1:16:1.90:2,0,152	0/1:22,4:26:30:30,0,346	0/1:7,2:10:20.27:20,0,102	0/0:5,0:12:20.49:0,20,120	0/0:9,0:28:40.42:0,40,253	1/1:1,12:13:0.66:168,1,0	0/1:23,1:26:5.56:6,0,406	0/0:23,0:22:43.71:0,44,443	0/1:9,1:10:4.47:4,0,122
chr10	71176935	.	AT	A	4095.71	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=14.575;DP=564;FS=0.000;HRun=10;HaplotypeScore=60.0862;InbreedingCoeff=0.9020;MQ=73.94;MQ0=1;MQRankSum=-0.424;QD=18.20;ReadPosRankSum=2.190;VQSLOD=4.2245;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,40:41:86.80:982,87,0	1/1:2,8:10:23.99:208,24,0	0/0:14,0:14:9.27:0,9,189	0/1:7,0:8:15.17:15,0,88	0/0:26,0:26:66.16:0,66,714	0/0:26,0:26:72.19:0,72,789	0/0:18,0:18:51.13:0,51,558	0/0:36,0:36:84.23:0,84,929	0/0:11,2:13:7.03:0,7,305	1/1:2,16:18:47.95:408,48,0	1/1:2,28:30:77.98:677,78,0	0/0:23,0:23:63.17:0,63,696	1/1:1,0:11:18.33:54,18,0	0/0:10,0:10:21.06:0,21,232	0/0:16,0:16:48.12:0,48,523	0/0:16,0:16:48.13:0,48,531	1/1:1,22:24:59.01:501,59,0	1/1:2,25:27:60.27:626,60,0	0/0:28,0:27:69.18:0,69,756	0/0:19,0:20:50.95:0,51,535	0/0:22,0:22:57.15:0,57,631	0/0:12,0:12:33.08:0,33,356	1/1:2,0:23:36.66:107,37,0	1/1:3,0:13:16.29:48,16,0	1/1:1,18:19:53.99:469,54,0	0/0:20,0:20:51.13:0,51,554	0/0:23,0:23:63.16:0,63,688	0/0:15,0:15:33.09:0,33,365
chr10	71177474	.	GA	G	1784.88	PASS	AB=0.807;AC=18;AF=0.360;AN=50;BaseQRankSum=9.084;DP=613;FS=9.576;HRun=13;HaplotypeScore=72.8486;InbreedingCoeff=0.1971;MQ=62.12;MQ0=5;MQRankSum=-0.217;QD=5.22;ReadPosRankSum=1.090;VQSLOD=1.6038;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,26:37:69.66:493,70,0	1/1:1,7:8:17.89:131,18,0	0/1:21,1:12:10.93:11,0,24	0/1:20,3:16:6.98:7,0,42	0/1:22,5:28:40.51:41,0,305	0/1:22,3:26:30.89:31,0,387	0/0:21,2:25:9.94:0,10,388	0/1:23,7:30:65.83:66,0,385	0/0:19,0:20:19.42:0,19,364	1/1:11,19:31:58.61:421,59,0	0/1:5,8:14:0.32:152,0,0	0/0:29,2:33:24:0,24,533	./.	0/0:31,1:32:59.09:0,59,710	0/0:32,0:34:74.90:0,75,694	0/0:22,1:23:18.21:0,18,366	0/1:27,4:31:15.56:16,0,494	1/1:1,14:16:34.85:247,35,0	0/1:17,6:21:89.86:90,0,159	0/0:18,0:18:36.05:0,36,345	0/1:22,3:25:23.59:24,0,279	0/0:19,1:20:26.19:0,26,412	./.	./.	0/1:9,14:25:12.57:228,0,13	0/0:22,1:23:28.91:0,29,428	0/0:29,0:29:33.70:0,34,446	0/0:13,0:13:36.01:0,36,336
chr10	71177638	.	G	GCGGGGC	2835.24	PASS	AB=0.865;AC=3;AF=0.054;AN=56;BaseQRankSum=10.413;DP=752;FS=7.351;HRun=0;HaplotypeScore=184.9996;InbreedingCoeff=-0.0046;MQ=85.84;MQ0=0;MQRankSum=-9.110;QD=45.73;ReadPosRankSum=2.490;VQSLOD=3.2249;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:99:0,111,2705	0/0:15,0:15:45.13:0,45,1056	0/0:24,0:24:64.03:0,64,1406	0/0:26,0:26:69.21:0,69,1494	0/0:27,0:27:78.27:0,78,1916	0/0:20,0:20:60.18:0,60,1379	0/0:42,0:42:99:0,121,2928	0/0:37,0:37:99:0,105,2520	0/0:22,0:22:60.19:0,60,1404	0/0:33,0:33:96.33:0,96,2342	0/0:21,0:21:63.22:0,63,1528	0/0:28,0:28:78.25:0,78,1871	0/1:21,5:26:10.74:1130,0,11	0/0:32,0:32:93.32:0,93,2264	0/0:33,0:33:96.33:0,96,2338	0/0:29,0:29:87.30:0,87,2143	0/0:29,0:29:81.25:0,81,1936	0/0:26,0:26:75.24:0,75,1771	0/0:22,0:22:66.23:0,66,1597	0/0:32,0:32:93.30:0,93,2201	0/0:48,0:48:99:0,144,3487	0/0:24,0:24:72.25:0,72,1770	0/1:19,9:28:21.88:1645,0,22	0/1:8,0:8:50.29:161,0,50	0/0:24,0:24:69.22:0,69,1643	0/0:26,0:26:69.24:0,69,1697	0/0:29,0:28:78.25:0,78,1864	0/0:3,0:3:9.03:0,9,222
chr10	71177640	.	A	ACCTCTAAGGCG	4326.32	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.753;DP=737;FS=9.126;HRun=0;HaplotypeScore=240.6372;InbreedingCoeff=0.9767;MQ=85.17;MQ0=0;MQRankSum=-8.632;QD=100.61;ReadPosRankSum=0.385;VQSLOD=3.6270;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:99:0,114,3953	0/0:15,0:15:45.14:0,45,1477	0/0:22,0:22:66.18:0,66,1901	0/0:25,0:25:66.10:0,66,1842	0/0:28,0:28:84.25:0,84,2702	0/0:20,0:20:60.16:0,60,2037	0/0:42,0:42:99:0,123,4136	0/0:38,0:38:99:0,108,3659	0/0:21,0:21:63.17:0,63,2108	0/0:33,0:33:96.32:0,96,3334	0/0:21,0:21:63.20:0,63,2222	0/0:29,0:29:84.24:0,84,2715	1/1:11,5:16:36.12:1495,36,0	0/0:33,0:33:96.30:0,96,3250	0/0:34,0:34:99:0,99,3338	0/0:30,0:30:90.30:0,90,3080	0/0:29,0:29:78.27:0,78,2708	0/0:26,0:26:78.21:0,78,2534	0/0:24,0:24:72.20:0,72,2321	0/0:31,0:31:90.27:0,90,3007	0/0:49,0:49:99:0,141,4907	0/0:24,0:24:72.25:0,72,2587	1/1:11,9:20:54.15:2153,54,0	1/1:7,0:7:18.06:679,18,0	0/0:24,0:24:72.22:0,72,2335	0/0:26,0:26:72.24:0,72,2384	0/0:29,0:28:87.23:0,87,2694	0/0:3,0:3:9.03:0,9,335
chr10	71178049	.	G	GT	2585.30	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-7.281;DP=491;FS=0.425;HRun=10;HaplotypeScore=54.4240;InbreedingCoeff=0.9471;MQ=67.24;MQ0=0;MQRankSum=0.873;QD=20.36;ReadPosRankSum=1.033;VQSLOD=4.4270;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:26:51.13:543,51,0	1/1:3,8:11:23.98:241,24,0	0/0:7,0:7:11.73:0,12,86	0/0:13,0:12:26.59:0,27,191	0/0:36,0:36:89.85:0,90,737	0/0:12,0:13:32:0,32,251	0/0:14,0:14:32.94:0,33,271	0/0:30,0:30:53.86:0,54,441	0/0:17,0:17:44.93:0,45,369	1/1:4,24:28:75.16:787,75,0	1/1:3,11:14:33.08:352,33,0	0/0:18,0:18:47.88:0,48,385	0/0:2,0:15:22.40:0,22,65	0/0:21,0:21:31.86:0,32,440	0/0:13,0:13:32.94:0,33,271	0/0:14,0:14:32.96:0,33,271	0/0:18,0:18:38.88:0,39,316	1/1:1,1:24:51.20:257,51,0	0/0:24,0:24:52.93:0,53,419	0/0:24,0:24:40.13:0,40,491	0/0:10,0:10:20.96:0,21,172	0/0:12,0:12:32.86:0,33,260	0/0:2,0:15:26.48:0,26,77	0/0:0,0:4:8.15:0,8,24	1/1:3,20:24:57.06:592,57,0	0/0:19,0:19:44.92:0,45,368	0/0:18,1:19:3.92:0,4,236	0/0:8,0:8:23.93:0,24,192
chr10	71179006	.	GT	G	2930.39	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.309;DP=761;FS=6.299;HRun=2;HaplotypeScore=82.4928;InbreedingCoeff=0.9985;MQ=84.61;MQ0=0;MQRankSum=-2.695;QD=33.68;ReadPosRankSum=2.450;VQSLOD=3.8503;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,156,2249	0/0:11,0:11:33.10:0,33,472	0/0:32,0:32:84.02:0,84,1118	0/0:24,0:24:69.17:0,69,920	0/0:35,0:35:99:0,105,1553	0/0:26,0:26:78.25:0,78,1142	0/0:28,0:28:84.28:0,84,1252	0/0:31,0:31:93.23:0,93,1251	0/0:26,0:26:78.25:0,78,1149	0/0:26,0:26:75.23:0,75,1085	0/0:24,0:24:69.23:0,69,1034	0/0:22,0:22:63.21:0,63,944	1/1:0,24:24:63.20:817,63,0	0/0:33,0:33:96.31:0,96,1417	0/0:38,0:38:99:0,114,1665	0/0:24,0:24:69.22:0,69,1014	0/0:27,0:27:81.23:0,81,1168	0/0:19,0:19:57.19:0,57,844	0/0:21,0:21:63.08:0,63,842	0/0:23,0:23:66.19:0,66,931	0/0:38,0:38:99:0,108,1554	0/0:19,0:19:48.16:0,48,719	1/1:1,22:23:66.21:856,66,0	1/1:0,40:40:99:1400,108,0	0/0:22,0:22:66.21:0,66,970	0/0:33,0:33:99:0,99,1461	0/0:32,0:32:96.28:0,96,1373	0/0:7,0:7:21.07:0,21,314
chr10	71179216	.	TG	T	3710.43	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.678;DP=810;FS=1.852;HRun=1;HaplotypeScore=90.2889;InbreedingCoeff=0.9985;MQ=84.59;MQ0=0;MQRankSum=-1.050;QD=38.25;ReadPosRankSum=1.173;VQSLOD=4.1341;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.26:0,75,1199	0/0:17,0:17:51.17:0,51,812	0/0:23,0:24:72.19:0,72,1061	0/0:25,0:25:75.19:0,75,1140	0/0:37,0:37:99:0,105,1622	0/0:13,0:13:39.13:0,39,623	0/0:26,0:26:78.27:0,78,1247	0/0:37,0:37:99:0,111,1710	0/0:38,0:38:99:0,114,1820	0/0:29,0:28:84.29:0,84,1343	0/0:32,0:32:93.32:0,93,1480	0/0:38,0:38:99:0,114,1773	1/1:0,40:40:99:1551,111,0	0/0:27,0:27:81.26:0,81,1269	0/0:32,0:32:96.33:0,96,1532	0/0:30,0:30:90.31:0,90,1439	0/0:42,0:42:99:0,126,1907	0/0:24,0:24:72.25:0,72,1142	0/0:19,0:19:57.19:0,57,903	0/0:31,0:31:93.32:0,93,1484	0/0:32,0:32:96.33:0,96,1531	0/0:28,0:28:84.26:0,84,1316	1/1:0,31:31:81.23:1110,81,0	1/1:0,26:26:75.25:1049,75,0	0/0:24,0:24:69.24:0,69,1100	0/0:45,0:45:99:0,135,2157	0/0:31,0:31:93.32:0,93,1487	0/0:7,0:7:21.07:0,21,336
chr10	71180390	.	CT	C	7107.43	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=17.538;DP=666;FS=11.263;HRun=1;HaplotypeScore=77.0392;InbreedingCoeff=0.9991;MQ=84.77;MQ0=0;MQRankSum=-5.028;QD=40.38;ReadPosRankSum=2.956;VQSLOD=4.8527;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,35:36:99:1456,105,0	1/1:0,8:8:21.07:294,21,0	0/0:20,0:20:60.20:0,60,943	0/0:20,2:22:57.19:0,57,899	0/0:18,0:18:54.18:0,54,863	0/0:23,0:23:69.24:0,69,1103	0/0:33,0:33:96.33:0,96,1527	0/0:37,0:37:99:0,111,1726	0/0:33,0:33:99:0,99,1581	1/1:0,23:23:69.23:961,69,0	1/1:0,9:9:27.09:377,27,0	0/0:23,0:23:69.24:0,69,1099	1/1:0,26:26:72.24:1007,72,0	0/0:29,0:29:87.27:0,87,1341	0/0:27,0:26:81.28:0,81,1288	0/0:28,0:28:84.27:0,84,1320	0/0:28,0:28:84.27:0,84,1315	1/1:0,17:17:45.15:626,45,0	0/0:24,0:24:72.23:0,72,1101	0/0:25,0:25:75.26:0,75,1199	0/0:18,0:18:54.17:0,54,839	0/0:31,0:31:93.30:0,93,1462	1/1:0,18:18:54.18:752,54,0	1/1:0,18:18:54.18:755,54,0	1/1:0,21:21:63.21:881,63,0	0/0:23,1:24:30.27:0,30,1061	0/0:31,0:31:93.32:0,93,1484	0/0:16,0:16:48.13:0,48,720
chr10	71181053	.	CTAAACAAACAAA	C	6410.42	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.139;DP=598;FS=14.857;HRun=0;HaplotypeScore=210.5180;InbreedingCoeff=0.9511;MQ=71.44;MQ0=3;MQRankSum=-6.683;QD=56.23;ReadPosRankSum=2.247;VQSLOD=3.2100;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:11.49:706,11,0	1/1:0,10:10:17.86:605,18,0	0/0:20,0:18:47.26:0,47,1002	0/0:26,0:24:72.16:0,72,1882	0/0:37,0:37:99:0,111,5210	0/0:24,0:24:72.10:0,72,3280	0/0:17,0:17:51.10:0,51,2193	0/0:38,0:38:99:0,111,3349	0/0:16,0:16:48.07:0,48,1769	1/1:0,26:26:71.82:1875,72,0	1/1:0,33:33:92.55:2518,93,0	0/0:23,0:23:69.10:0,69,3544	0/0:18,0:19:57.13:0,57,1359	0/0:22,0:20:57.07:0,57,1301	0/0:24,0:24:69.14:0,69,2855	0/0:18,0:18:54.12:0,54,2529	0/0:21,0:21:63.07:0,63,2233	1/1:0,11:11:3.01:118,3,0	0/0:10,0:8:27.03:0,27,840	0/0:23,0:23:69.14:0,69,2779	0/0:13,0:13:39.09:0,39,1980	0/0:26,0:26:78.20:0,78,3731	0/0:26,0:26:75.19:0,75,2019	0/0:19,0:19:54.17:0,54,1683	1/1:0,13:13:15.05:588,15,0	0/0:29,0:29:87.24:0,87,3995	0/0:22,0:22:66.15:0,66,3310	0/0:11,0:11:33.04:0,33,1271
chr10	71181054	.	TAAAC	T	3804.19	PASS	AB=0.944;AC=21;AF=0.375;AN=56;BaseQRankSum=13.723;DP=598;FS=0.000;HRun=0;HaplotypeScore=126.4056;InbreedingCoeff=0.8639;MQ=70.72;MQ0=3;MQRankSum=-6.218;QD=17.53;ReadPosRankSum=3.203;VQSLOD=3.3374;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:18.02:168,18,0	1/1:10,0:10:15.02:140,15,0	0/0:19,0:17:6.02:0,6,108	0/0:26,0:24:18.04:0,18,366	0/0:38,0:38:81.28:0,81,1914	0/0:24,0:24:51.18:0,51,1201	0/0:16,0:16:33.09:0,33,696	0/0:38,0:38:37.07:0,37,863	0/1:16,1:17:17.66:18,0,616	1/1:26,0:26:41.91:391,42,0	1/1:33,0:33:59.10:537,59,0	0/0:23,0:23:54.19:0,54,1291	1/1:6,13:19:42.14:665,42,0	1/1:10,11:20:30.10:478,30,0	0/0:24,0:24:39.13:0,39,933	0/0:18,0:18:36.12:0,36,861	0/0:21,0:21:27.05:0,27,594	1/1:11,0:11:3:28,3,0	0/0:9,0:7:9.03:0,9,215	0/0:24,0:24:42.14:0,42,970	0/0:13,0:13:30.10:0,30,716	0/0:27,0:27:54.19:0,54,1271	1/1:9,17:26:48.16:764,48,0	1/1:8,11:19:30.10:478,30,0	1/1:13,0:13:15.02:140,15,0	0/0:29,0:29:51.18:0,51,1221	0/0:21,0:21:48.16:0,48,1149	0/0:11,0:11:12.04:0,12,285
chr10	71181189	.	TACACACACACACACACACACACAC	T	3693.91	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=6.546;DP=634;FS=0.946;HRun=0;HaplotypeScore=326.7164;InbreedingCoeff=0.9030;MQ=55.58;MQ0=16;MQRankSum=-4.833;QD=35.18;ReadPosRankSum=1.412;VQSLOD=1.9301;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,3:27:15.03:660,15,0	./.	0/0:52,0:22:8.99:0,9,182	0/0:44,0:27:10.09:0,10,301	0/0:13,0:21:18.06:0,18,1485	0/0:22,0:22:42.13:0,42,3836	0/0:25,0:25:38.96:0,39,2884	0/0:36,0:36:51.16:0,51,2661	0/0:22,0:22:24.07:0,24,2282	1/1:13,9:22:24.06:1197,24,0	1/1:15,8:22:6.02:330,6,0	0/0:16,0:16:30.10:0,30,2742	0/0:14,0:17:24.08:0,24,919	0/0:8,0:11:12.51:0,13,1169	0/0:26,0:32:30.41:0,30,2662	0/0:13,0:15:27.09:0,27,2819	0/0:23,0:22:36.59:0,37,3142	1/1:10,4:14:6.02:377,6,0	0/0:18,0:18:21.07:0,21,1660	0/0:15,0:15:20.93:0,21,1851	0/0:49,0:49:75.21:0,75,6502	0/0:15,0:21:21.07:0,21,1403	0/0:14,0:21:24.19:0,24,1083	0/0:25,0:25:31.62:0,32,1606	1/1:6,13:19:18.06:1130,18,0	0/0:17,0:16:39.12:0,39,2918	0/0:11,0:10:21.05:0,21,1897	0/0:6,0:10:18.06:0,18,1750
chr10	71181877	.	G	GGTATTTTTTTTT	8311.39	PASS	AB=0.960;AC=13;AF=0.232;AN=56;BaseQRankSum=3.909;DP=697;FS=8.073;HRun=0;HaplotypeScore=221.3610;InbreedingCoeff=0.8416;MQ=76.37;MQ0=0;MQRankSum=-11.779;QD=62.03;ReadPosRankSum=-1.933;VQSLOD=3.0244;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,5:29:39.13:1890,39,0	1/1:2,1:6:3.01:190,3,0	0/0:17,0:17:42.09:0,42,1505	0/0:28,0:29:77.69:0,78,2318	0/0:30,0:30:90.30:0,90,3415	0/0:29,0:29:87.30:0,87,3142	0/0:20,0:20:60.17:0,60,2047	0/0:32,0:33:93.22:0,93,3193	0/0:31,0:31:90.27:0,90,3439	1/1:11,3:28:55.06:2363,55,0	1/1:5,5:20:33.11:1764,33,0	0/0:25,0:25:75.24:0,75,2664	0/0:32,0:32:96.33:0,96,3390	0/0:31,0:31:87.22:0,87,3256	0/0:24,0:24:72.25:0,72,2756	0/0:27,0:27:78.21:0,78,2859	0/0:38,0:38:99:0,108,4087	1/1:2,1:7:6.02:370,6,0	0/0:26,0:26:72.22:0,72,2189	0/0:18,0:18:54.19:0,54,1963	0/0:17,0:17:51.17:0,51,1734	0/0:36,0:36:99:0,108,3887	0/0:23,0:23:66.18:0,66,2339	0/0:26,0:26:78.25:0,78,2783	1/1:7,1:19:30.10:1616,30,0	0/1:23,1:24:99:118,0,2540	0/0:38,0:38:99:0,108,4140	0/0:13,0:13:39.13:0,39,1434
chr10	71186179	.	T	TA	5019.05	PASS	AB=0.900;AC=19;AF=0.339;AN=56;BaseQRankSum=-12.917;DP=590;FS=2.060;HRun=7;HaplotypeScore=53.1993;InbreedingCoeff=0.9073;MQ=67.88;MQ0=0;MQRankSum=-0.961;QD=25.10;ReadPosRankSum=2.859;VQSLOD=5.4487;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:54.17:652,54,0	1/1:1,9:10:24.07:290,24,0	0/0:8,0:8:20.48:0,20,170	0/0:13,0:13:26.78:0,27,224	0/0:28,0:28:78.10:0,78,742	0/0:38,0:38:99:0,102,968	0/0:14,0:14:39.06:0,39,377	0/0:29,0:29:81.12:0,81,779	0/0:19,0:19:57.09:0,57,550	1/1:2,23:25:69.21:834,69,0	1/1:2,13:15:33.10:399,33,0	0/0:16,0:16:48.07:0,48,458	1/1:1,18:20:45.14:542,45,0	0/0:22,0:22:60.08:0,60,574	0/0:29,0:29:81.11:0,81,776	0/0:23,0:23:63.10:0,63,608	0/0:31,0:31:84.13:0,84,811	1/1:4,29:33:84.25:1010,84,0	0/0:22,0:22:60.07:0,60,568	0/0:25,0:25:69.07:0,69,658	0/0:20,0:20:51.07:0,51,492	0/0:15,0:15:42.07:0,42,406	1/1:3,14:17:38.78:471,39,0	1/1:4,13:17:7.14:370,7,0	1/1:3,13:16:36.11:435,36,0	0/1:24,3:27:17.17:17,0,580	0/0:24,0:23:63.08:0,63,602	0/0:14,0:14:42.07:0,42,406
chr10	71187348	.	TTGAG	T	2549.29	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.730;DP=598;FS=6.674;HRun=0;HaplotypeScore=96.5161;InbreedingCoeff=0.9949;MQ=72.46;MQ0=0;MQRankSum=0.638;QD=41.12;ReadPosRankSum=3.388;VQSLOD=3.7495;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.31:0,90,2468	0/0:13,0:13:39.13:0,39,1082	0/0:19,0:19:51.17:0,51,1335	0/0:16,0:16:19.69:0,20,1059	0/0:23,0:23:69.24:0,69,1914	0/0:24,0:24:69.24:0,69,1930	0/0:6,0:6:18.06:0,18,502	0/0:33,0:33:96.33:0,96,2675	0/0:15,0:15:45.15:0,45,1249	0/0:26,0:26:75.26:0,75,2093	0/0:22,0:22:66.23:0,66,1846	0/0:20,0:20:57.18:0,57,1535	1/1:0,22:22:51.18:1015,51,0	0/0:17,0:17:51.18:0,51,1426	0/0:16,0:16:45.15:0,45,1259	0/0:23,0:23:69.24:0,69,1930	0/0:27,0:27:81.28:0,81,2250	0/0:24,0:24:69.24:0,69,1917	0/0:19,0:19:54.18:0,54,1452	0/0:30,0:30:87.30:0,87,2357	0/0:16,0:16:48.15:0,48,1216	0/0:12,0:12:36.12:0,36,1006	1/1:1,25:26:54.19:1079,54,0	1/1:0,14:14:30.10:599,30,0	0/0:36,0:36:99:0,108,2960	0/0:27,0:27:81.26:0,81,2137	0/0:26,0:25:78.22:0,78,2043	0/0:16,0:16:48.16:0,48,1333
chr10	71188457	.	GTTCCTTCCATT	G	6613.15	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=12.575;DP=667;FS=14.000;HRun=0;HaplotypeScore=221.0898;InbreedingCoeff=0.8864;MQ=74.21;MQ0=4;MQRankSum=-13.361;QD=56.04;ReadPosRankSum=3.247;VQSLOD=3.2455;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,31:36:39.13:1203,39,0	1/1:4,18:21:40.32:1511,40,0	0/0:25,0:25:66.23:0,66,2968	0/0:20,0:19:54.19:0,54,2514	0/0:35,0:35:93.30:0,93,4530	0/0:31,0:31:93.32:0,93,4953	0/0:22,0:20:57.20:0,57,2846	0/0:35,0:34:93.31:0,93,4823	0/0:20,0:20:60.21:0,60,3182	1/1:5,19:23:56.54:1957,57,0	1/1:1,16:17:36.12:1130,36,0	0/0:24,0:24:63.22:0,63,3266	0/0:17,0:17:51.18:0,51,2786	0/0:28,0:28:84.27:0,84,4541	0/0:24,0:24:69.24:0,69,3848	0/0:12,0:12:36.12:0,36,2014	0/0:26,0:26:72.25:0,72,4064	0/1:7,0:7:30.30:30,0,120	0/0:17,0:17:48.16:0,48,2319	0/0:28,0:28:75.26:0,75,3936	0/0:25,0:25:72.25:0,72,3997	0/0:23,0:23:69.22:0,69,3591	0/0:27,0:27:78.25:0,78,4046	0/0:25,0:25:75.26:0,75,4188	1/1:2,10:12:24.08:781,24,0	0/0:36,0:35:99:0,105,5681	0/0:34,0:34:99:0,102,5545	0/0:15,0:15:45.15:0,45,2481
chr10	71188685	.	A	AT	3537.04	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-9.427;DP=650;FS=1.772;HRun=8;HaplotypeScore=61.5481;InbreedingCoeff=0.9993;MQ=72.45;MQ0=0;MQRankSum=-2.537;QD=27.00;ReadPosRankSum=0.931;VQSLOD=4.3971;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,26:31:72.18:815,72,0	1/1:2,14:16:36.07:401,36,0	0/0:14,0:12:29.99:0,30,268	0/0:16,0:15:32.92:0,33,300	0/0:41,0:41:99:0,117,1061	0/0:26,0:26:72.03:0,72,655	0/0:21,0:21:57.03:0,57,522	0/0:34,0:34:81.01:0,81,737	0/0:20,0:20:53.52:0,54,493	1/1:5,17:22:54.13:602,54,0	1/1:1,17:18:51.15:586,51,0	0/0:30,0:30:81.02:0,81,737	0/0:28,0:28:75.04:0,75,686	0/0:25,0:25:63.02:0,63,577	0/0:25,0:25:75.04:0,75,686	0/0:16,0:16:45.02:0,45,412	0/0:24,0:24:63.03:0,63,577	1/1:2,19:21:54.16:623,54,0	0/0:22,0:22:54.03:0,54,494	0/0:29,0:29:81.02:0,81,736	0/0:17,0:17:51.01:0,51,461	0/0:20,0:20:51.03:0,51,467	0/0:20,0:20:54.03:0,54,494	0/0:12,0:12:36.02:0,36,329	1/1:4,19:23:27.34:510,27,0	0/0:25,0:25:63.03:0,63,577	0/0:42,0:42:99:0,99,906	0/0:11,0:12:26.05:0,26,226
chr10	71190794	.	GA	G	1915.46	PASS	AB=0.923;AC=13;AF=0.232;AN=56;BaseQRankSum=6.507;DP=529;FS=5.643;HRun=10;HaplotypeScore=53.1700;InbreedingCoeff=0.7710;MQ=57.89;MQ0=16;MQRankSum=2.350;QD=13.49;ReadPosRankSum=4.480;VQSLOD=3.4245;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,36:38:59.21:609,59,0	1/1:0,8:6:9:78,9,0	0/0:29,0:6:6.01:0,6,59	0/0:22,0:6:12.98:0,13,92	0/0:29,3:32:34.38:0,34,818	0/0:19,0:19:51.13:0,51,553	0/0:15,0:14:33.09:0,33,363	0/0:24,2:25:1.91:0,2,444	0/0:15,0:15:36.02:0,36,377	1/1:3,14:17:41.99:365,42,0	1/1:3,17:20:35.98:312,36,0	0/0:13,0:13:30.08:0,30,332	0/0:3,0:18:20:0,20,105	0/0:19,0:19:51.01:0,51,523	0/0:18,0:18:35.51:0,36,455	0/0:19,0:19:54.14:0,54,591	0/0:26,0:25:66.16:0,66,720	1/1:8,18:25:5.49:279,5,0	0/1:11,1:10:8.01:8,0,148	0/0:28,0:29:74.17:0,74,821	0/0:6,0:6:18.05:0,18,199	0/0:5,0:5:12.03:0,12,133	0/0:3,0:16:25.77:0,26,147	0/0:1,0:16:25.57:0,26,128	1/1:0,20:18:50.99:443,51,0	0/0:10,1:11:1.02:0,1,239	0/0:19,0:19:54.13:0,54,581	0/0:14,0:13:30.08:0,30,330
chr10	71191825	.	AG	A	1653.71	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.599;DP=641;FS=1.250;HRun=1;HaplotypeScore=68.2825;InbreedingCoeff=0.9789;MQ=68.68;MQ0=0;MQRankSum=-0.054;QD=34.45;ReadPosRankSum=1.144;VQSLOD=3.5759;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,157,2487	0/0:9,0:9:27.09:0,27,429	0/0:16,0:16:42.03:0,42,602	0/0:17,0:16:45.14:0,45,657	0/0:23,0:23:69.24:0,69,1100	0/0:19,0:19:57.19:0,57,909	0/0:30,0:30:90.29:0,90,1410	0/0:38,0:38:99:0,114,1768	0/0:16,0:16:48.16:0,48,766	0/0:25,0:25:75.25:0,75,1180	0/0:15,0:15:42.14:0,42,666	0/0:22,0:22:66.23:0,66,1055	1/1:0,22:22:66.22:915,66,0	0/0:27,0:27:81.28:0,81,1294	0/0:21,0:21:63.21:0,63,1007	0/0:17,0:17:51.16:0,51,792	0/0:29,0:29:84.29:0,84,1337	0/0:20,0:20:60.20:0,60,956	0/0:30,0:29:90.29:0,90,1390	0/0:36,0:36:99:0,105,1658	0/0:27,0:27:69.24:0,69,1101	0/0:24,0:24:72.25:0,72,1148	1/1:0,10:10:30.10:420,30,0	1/1:0,16:16:33.11:461,33,0	0/0:25,0:25:75.26:0,75,1199	0/0:31,0:31:93.31:0,93,1464	0/0:18,0:18:54.18:0,54,863	0/0:3,0:3:9.03:0,9,143
chr10	71194528	.	GATAT	G	213.08	PASS	AB=0.703;AC=3;AF=0.115;AN=26;BaseQRankSum=1.778;DP=143;FS=1.378;HRun=0;HaplotypeScore=27.6185;InbreedingCoeff=0.2113;MQ=81.81;MQ0=3;MQRankSum=-2.143;QD=5.33;ReadPosRankSum=0.714;VQSLOD=1.0673;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:3,0:3:3.01:0,3,50	./.	0/0:10,0:5:0:0,0,0	./.	0/0:5,0:5:9.02:0,9,171	./.	0/1:15,8:25:99:164,0,150	./.	0/0:7,0:7:6.02:0,6,127	0/0:5,0:5:6.02:0,6,140	./.	./.	./.	0/0:2,0:4:5.49:0,5,25	./.	0/0:10,0:11:14.27:0,14,200	1/1:14,0:12:12.49:136,12,0	0/0:4,0:3:3.01:0,3,58	./.	0/0:2,0:3:2.74:0,3,12	./.	./.	./.	0/0:4,0:4:3.01:0,3,72	0/0:3,0:3:3.01:0,3,72	./.	./.
chr10	71194545	.	ATATATATATATATATC	A	719.92	PASS	AC=4;AF=0.111;AN=36;BaseQRankSum=1.823;DP=116;FS=10.655;HRun=0;HaplotypeScore=50.2495;InbreedingCoeff=0.3643;MQ=65.33;MQ0=8;MQRankSum=-3.517;QD=37.89;ReadPosRankSum=1.780;VQSLOD=0.9090;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:3,0:3:9.03:0,9,451	1/1:6,0:2:1.55:4,2,0	0/0:20,0:7:10.74:0,11,124	./.	0/0:5,0:5:12.04:0,12,777	0/0:1,0:1:3.01:0,3,93	0/0:30,0:28:84.28:0,84,3729	0/0:1,0:1:3.01:0,3,35	0/0:2,0:2:6.02:0,6,383	0/0:3,0:3:9.03:0,9,504	./.	0/0:1,0:1:3.01:0,3,38	./.	0/0:2,0:2:6.02:0,6,363	./.	0/0:10,0:10:23.89:0,24,1378	1/1:5,4:11:27:807,27,0	0/0:2,0:1:3.01:0,3,229	./.	0/0:1,0:1:3.01:0,3,182	./.	./.	./.	0/0:3,0:3:9.03:0,9,410	0/0:2,0:2:6.02:0,6,272	0/0:2,0:2:6.02:0,6,235	./.
chr10	71194564	.	A	ATG	67.03	PASS	AC=4;AF=0.083;AN=48;BaseQRankSum=2.221;DP=212;FS=2.429;HRun=0;HaplotypeScore=40.7484;InbreedingCoeff=0.4885;MQ=50.17;MQ0=15;MQRankSum=-1.687;QD=5.59;ReadPosRankSum=-1.351;VQSLOD=2.0368;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:2.22:7,2,0	0/0:3,0:2:6.02:0,6,75	0/0:23,0:5:8.76:0,9,59	0/0:40,0:12:20.81:0,21,172	0/0:6,0:6:15.04:0,15,177	0/0:7,0:7:18.04:0,18,215	0/0:4,0:4:9.03:0,9,114	0/0:27,0:25:45.05:0,45,501	0/0:6,0:6:18.04:0,18,204	0/0:3,0:3:9.02:0,9,93	0/0:8,0:8:18.03:0,18,228	0/0:3,0:3:9:0,9,88	1/1:2,4:6:9.03:148,9,0	0/0:3,0:3:9.02:0,9,101	0/0:5,0:5:15.03:0,15,175	0/0:3,0:3:6.02:0,6,76	0/0:8,0:8:20.43:0,20,233	0/0:19,0:16:41.48:0,41,466	0/0:3,0:2:3.01:0,3,38	./.	0/0:2,0:2:6:0,6,58	./.	./.	./.	0/0:5,0:4:9.02:0,9,102	0/0:6,0:6:15.93:0,16,193	0/0:7,0:7:21.04:0,21,238	0/0:4,0:3:6:0,6,62
chr10	71194593	.	TAC	T	717.82	PASS	AB=0.937;AC=18;AF=0.360;AN=50;BaseQRankSum=5.883;DP=322;FS=8.137;HRun=0;HaplotypeScore=39.8500;InbreedingCoeff=0.6212;MQ=45.05;MQ0=39;MQRankSum=-0.808;QD=4.63;ReadPosRankSum=2.038;VQSLOD=0.2193;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,7:9:9.03:105,9,0	1/1:3,4:6:6.02:70,6,0	./.	0/1:54,1:9:12.83:29,0,13	0/0:7,0:6:12.04:0,12,185	0/0:6,0:6:12.02:0,12,155	0/0:6,0:5:12.04:0,12,189	0/0:17,0:16:12.04:0,12,173	0/0:10,0:8:18.06:0,18,283	1/1:5,1:5:9.03:105,9,0	1/1:7,7:13:11.92:141,12,0	0/0:8,0:8:20.81:0,21,293	1/1:2,0:8:8.52:42,9,0	0/0:7,0:7:18.06:0,18,267	0/0:8,0:8:21.06:0,21,308	0/0:3,0:3:9.03:0,9,139	0/0:8,1:9:6.72:0,7,263	1/1:11,13:20:26.10:315,26,0	1/1:13,0:8:0.47:1,0,0	0/0:2,0:1:3.01:0,3,47	0/0:4,0:3:3.01:0,3,47	0/0:4,0:4:12.02:0,12,156	./.	./.	1/1:3,5:7:6.02:70,6,0	0/1:9,1:10:8.20:8,0,306	0/0:16,0:16:48.03:0,48,681	0/0:11,0:5:12.04:0,12,172
chr10	71199805	.	TA	T	1010.39	PASS	AB=0.889;AC=7;AF=0.125;AN=56;BaseQRankSum=10.028;DP=623;FS=6.782;HRun=9;HaplotypeScore=64.1693;InbreedingCoeff=0.7842;MQ=64.45;MQ0=0;MQRankSum=-0.117;QD=14.43;ReadPosRankSum=4.164;VQSLOD=3.6171;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:35:99:0,102,1152	0/0:7,0:7:15.04:0,15,174	0/0:14,0:9:6.01:0,6,64	0/0:8,0:7:5.95:0,6,50	0/0:29,0:28:66.11:0,66,735	0/0:30,0:30:87.25:0,87,997	0/0:19,0:19:42.10:0,42,466	0/0:19,0:19:51.13:0,51,573	0/0:24,0:24:69.19:0,69,788	0/0:29,0:29:75.18:0,75,823	0/0:23,0:23:54.14:0,54,606	0/0:30,0:31:77.22:0,77,911	1/1:0,17:17:45.02:412,45,0	0/1:14,2:16:12.72:13,0,375	0/0:32,0:32:75.19:0,75,840	0/0:29,0:29:75.16:0,75,835	0/0:24,0:24:66.18:0,66,754	0/0:31,0:31:87.21:0,87,980	0/0:25,0:25:72.17:0,72,804	0/0:21,0:22:60.04:0,60,674	0/0:21,0:21:57.12:0,57,619	0/0:17,0:17:42.12:0,42,478	1/1:3,18:21:41.99:377,42,0	1/1:1,15:16:39.02:357,39,0	0/0:13,0:13:39.12:0,39,451	0/0:19,0:19:51.13:0,51,578	0/0:39,0:39:93.12:0,93,1036	0/0:12,0:12:36.09:0,36,405
chr10	71200197	.	CG	C	1180.11	PASS	AB=0.995;AC=24;AF=0.462;AN=52;BaseQRankSum=2.818;DP=206;FS=6.809;HRun=1;HaplotypeScore=28.9684;InbreedingCoeff=0.0371;MQ=58.18;MQ0=12;MQRankSum=0.452;QD=7.15;ReadPosRankSum=1.709;VQSLOD=0.6579;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:3.87:0,4,26	0/1:1,0:1:0:0,0,0	1/1:13,0:2:1.06:4,1,0	0/1:14,1:4:3.11:21,0,3	1/1:5,1:5:1.55:4,2,0	1/1:8,0:8:5.99:48,6,0	0/0:7,1:7:8.48:0,8,44	0/0:6,0:6:5.94:0,6,51	0/1:7,0:6:13.25:45,0,13	0/1:4,0:3:10.82:18,0,11	0/1:6,0:6:17.94:18,0,28	0/1:12,0:12:12.25:12,0,42	1/1:1,7:8:23.95:253,24,0	0/0:2,0:2:3.45:0,3,22	0/1:2,0:2:0:0,0,0	0/1:7,0:7:15.93:40,0,16	0/1:22,0:22:99:106,0,109	0/1:13,0:13:45.88:46,0,57	0/0:4,0:2:5.95:0,6,44	0/0:6,0:6:8.68:0,9,54	0/1:7,0:7:4.95:5,0,57	0/0:5,0:5:8.92:0,9,61	0/0:0,3:3:0.47:0,0,1	1/1:8,15:23:59.25:627,59,0	./.	0/1:6,0:6:17.42:17,0,25	1/1:5,0:5:11.74:60,12,0	./.
chr10	71200266	.	T	TC	1242.80	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.075;DP=415;FS=9.003;HRun=4;HaplotypeScore=45.6726;InbreedingCoeff=0.9956;MQ=63.74;MQ0=4;MQRankSum=-0.065;QD=33.59;ReadPosRankSum=1.247;VQSLOD=3.7504;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.14:0,51,578	0/0:7,0:7:21.06:0,21,237	0/0:19,0:15:42.11:0,42,467	0/0:22,0:15:44.99:0,45,480	0/0:12,0:12:33.09:0,33,374	0/0:8,0:8:24.07:0,24,271	0/0:14,0:14:36.10:0,36,408	0/0:14,0:13:36.07:0,36,388	0/0:14,0:14:39.11:0,39,442	0/0:16,0:16:45.13:0,45,511	0/0:15,0:15:45.13:0,45,510	0/0:18,0:18:54.15:0,54,611	1/1:2,15:17:48.16:653,48,0	0/0:11,0:11:33.09:0,33,374	0/0:12,0:12:33.09:0,33,374	0/0:11,0:11:33.09:0,33,374	0/0:27,0:27:75.21:0,75,851	0/0:17,0:17:45.09:0,45,495	0/0:21,0:21:57.09:0,57,618	0/0:13,0:13:36.10:0,36,403	0/0:32,0:32:81.12:0,81,888	0/0:11,0:11:30.07:0,30,331	1/1:0,10:10:27.09:363,27,0	1/1:0,10:10:27.09:369,27,0	0/0:9,0:9:27.08:0,27,306	0/0:15,0:15:42.10:0,42,467	0/0:13,0:13:39.09:0,39,431	0/0:9,0:9:27.08:0,27,306
chr10	71201256	.	A	AG	1640.53	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.505;DP=624;FS=0.536;HRun=7;HaplotypeScore=73.0753;InbreedingCoeff=0.9877;MQ=77.44;MQ0=0;MQRankSum=-1.126;QD=22.79;ReadPosRankSum=0.916;VQSLOD=3.6400;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:87.13:0,87,840	0/0:14,0:14:33.04:0,33,319	0/0:21,0:18:35.86:0,36,319	0/0:20,0:20:44.84:0,45,392	0/0:19,0:19:51.05:0,51,481	0/0:26,0:26:69.07:0,69,654	0/0:21,0:21:60.08:0,60,574	0/0:21,0:21:48.05:0,48,460	0/0:32,0:32:90.14:0,90,869	0/0:16,0:16:36.05:0,36,348	0/0:14,0:14:36.06:0,36,347	0/0:27,0:27:75.10:0,75,718	1/1:4,21:25:31.20:654,31,0	0/0:28,0:28:78.09:0,78,742	0/0:40,0:39:99:0,111,1066	0/0:20,0:20:54.07:0,54,516	0/0:39,0:39:93.13:0,93,898	0/0:21,0:21:57.05:0,57,542	0/0:18,0:18:39.04:0,39,372	0/0:17,0:17:45.07:0,45,434	0/0:25,0:25:69.11:0,69,666	0/0:12,0:11:30.05:0,30,289	1/1:5,11:16:24.07:290,24,0	1/1:7,24:31:46.76:839,47,0	0/0:5,0:5:12.01:0,12,116	0/0:23,0:23:51.07:0,51,493	0/0:22,0:22:54.03:0,54,512	0/0:13,0:13:36.06:0,36,348
chr10	71201614	.	GTC	G	1729.79	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.305;DP=694;FS=3.441;HRun=0;HaplotypeScore=99.5558;InbreedingCoeff=0.9995;MQ=82.35;MQ0=0;MQRankSum=-10.845;QD=29.82;ReadPosRankSum=0.014;VQSLOD=4.9919;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,126,2169	0/0:13,0:13:36.11:0,36,596	0/0:33,0:33:84.09:0,84,1324	0/0:30,0:29:58.95:0,59,883	0/0:24,0:24:66.17:0,66,1050	0/0:28,0:28:72.21:0,72,1186	0/0:27,0:27:71.59:0,72,1175	0/0:27,0:27:69.23:0,69,1160	0/0:17,0:17:48.16:0,48,831	0/0:24,0:24:66.23:0,66,1143	0/0:16,0:16:42.14:0,42,717	0/0:26,0:26:69.21:0,69,1133	1/1:2,29:31:84.22:1095,84,0	0/0:32,0:32:90.31:0,90,1555	0/0:22,0:22:63.22:0,63,1086	0/0:23,0:23:66.23:0,66,1135	0/0:28,0:28:75.24:0,75,1264	0/0:27,0:27:81.23:0,81,1333	0/0:24,0:24:57.18:0,57,955	0/0:16,0:16:42.14:0,42,727	0/0:47,0:47:99:0,126,2125	0/0:23,0:23:60.21:0,60,1019	1/1:1,12:13:33.11:438,33,0	1/1:0,14:14:27.03:339,27,0	0/0:19,0:19:51.17:0,51,883	0/0:26,0:26:72.24:0,72,1212	0/0:18,0:18:45.15:0,45,774	0/0:19,0:19:51.17:0,51,883
chr10	71204052	.	T	TA	1169.77	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=0.795;DP=544;FS=7.326;HRun=8;HaplotypeScore=52.3847;InbreedingCoeff=0.8714;MQ=83.16;MQ0=0;MQRankSum=0.117;QD=20.52;ReadPosRankSum=0.294;VQSLOD=3.2927;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.01:0,51,462	0/0:7,0:7:21.01:0,21,192	0/0:19,0:19:35.92:0,36,312	0/1:12,0:12:4.68:5,0,166	0/0:23,0:23:60:0,60,544	0/0:24,0:24:62.99:0,63,567	0/0:17,0:17:41.98:0,42,374	0/0:31,0:31:71.99:0,72,650	0/0:18,0:18:38.98:0,39,350	0/0:29,0:28:72.02:0,72,654	0/0:15,0:15:36.02:0,36,329	0/0:19,0:19:48.02:0,48,439	1/1:1,7:8:21.06:237,21,0	0/0:14,0:14:39.02:0,39,356	0/0:19,0:19:54:0,54,485	0/0:16,0:16:45.02:0,45,412	0/0:15,0:15:45.02:0,45,412	0/0:21,0:21:57.02:0,57,522	0/0:23,0:23:54.02:0,54,491	0/0:28,0:28:78.03:0,78,711	0/0:19,0:19:45.01:0,45,411	0/0:29,0:29:81.04:0,81,741	1/1:5,19:24:57.17:658,57,0	1/1:0,13:13:36.11:415,36,0	0/0:20,0:20:48.02:0,48,439	0/0:18,0:18:48:0,48,432	0/0:23,0:23:66.03:0,66,600	0/0:21,0:21:63.03:0,63,577
chr10	71204354	.	TAA	T	2390.52	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=9.622;DP=554;FS=3.612;HRun=13;HaplotypeScore=75.6678;InbreedingCoeff=0.9506;MQ=61.88;MQ0=12;MQRankSum=1.521;QD=14.23;ReadPosRankSum=3.446;VQSLOD=2.8922;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,22:27:47.38:547,47,0	1/1:2,7:9:21.03:204,21,0	0/0:20,0:7:11.92:0,12,89	0/0:16,0:9:1.95:0,2,40	0/0:17,0:18:44.57:0,45,539	0/0:14,0:18:41.10:0,41,507	0/0:11,0:12:26.55:0,27,316	0/0:21,0:22:45.10:0,45,600	0/0:14,0:15:32.57:0,33,394	1/1:0,19:17:48.04:457,48,0	1/1:5,14:20:21.87:333,22,0	0/0:14,0:14:32.53:0,33,383	1/1:5,0:17:24.59:106,25,0	0/0:11,0:12:23.55:0,24,294	0/0:16,0:21:33.10:0,33,439	0/0:19,0:21:53.60:0,54,686	0/0:28,0:29:77.73:0,78,1064	1/1:3,12:16:13.35:243,13,0	0/0:17,0:17:37.55:0,38,420	0/0:26,0:33:77.42:0,77,975	0/0:11,0:11:20.98:0,21,273	0/0:25,0:25:51.13:0,51,706	1/1:4,0:19:32.91:142,33,0	1/1:3,0:15:27.43:119,27,0	1/1:2,19:20:10.71:451,11,0	0/0:18,0:22:43.71:0,44,549	0/0:29,0:29:78.17:0,78,1020	0/0:18,0:20:56.63:0,57,703
chr10	71205856	.	TGG	T	1764.47	PASS	AB=0.929;AC=13;AF=0.232;AN=56;BaseQRankSum=3.572;DP=352;FS=0.534;HRun=10;HaplotypeScore=53.3237;InbreedingCoeff=0.8042;MQ=79.21;MQ0=0;MQRankSum=-0.264;QD=20.05;ReadPosRankSum=4.910;VQSLOD=2.0132;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:29:69.65:770,70,0	1/1:0,4:4:9.02:100,9,0	0/0:19,0:19:6.46:0,6,358	0/0:17,0:18:3.88:0,4,283	0/0:16,0:16:36.09:0,36,498	0/0:9,0:9:12.04:0,12,190	0/0:12,0:12:27.09:0,27,414	0/0:11,0:11:12.04:0,12,181	0/0:13,0:13:24.08:0,24,374	1/1:3,10:13:30.08:334,30,0	1/1:2,8:10:24.06:267,24,0	0/0:18,0:20:44.57:0,45,595	0/0:2,0:9:17.97:0,18,75	0/0:10,0:11:26.58:0,27,383	0/0:7,0:7:14.96:0,15,183	0/0:8,0:8:15.04:0,15,205	0/0:20,0:20:48.14:0,48,718	1/1:0,8:8:21.06:234,21,0	0/0:6,0:8:11.51:0,12,125	0/0:11,0:12:17.54:0,18,224	0/0:20,0:22:38.06:0,38,484	0/0:5,0:5:9.02:0,9,121	0/0:2,0:6:9.98:0,10,34	0/0:4,0:10:12.98:0,13,60	1/1:3,8:11:21.05:234,21,0	0/1:12,1:13:7.87:8,0,329	0/0:17,0:20:50.09:0,50,652	0/0:5,0:6:15.05:0,15,211
chr10	71206021	.	A	AAG	2465.75	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=1.978;DP=549;FS=3.503;HRun=0;HaplotypeScore=83.7731;InbreedingCoeff=0.8297;MQ=53.85;MQ0=16;MQRankSum=3.527;QD=14.76;ReadPosRankSum=2.891;VQSLOD=3.6101;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:23,11:34:67.33:734,67,0	1/1:6,1:7:14.59:139,15,0	0/1:24,0:6:8.32:8,0,17	0/0:27,0:11:1.33:0,1,42	0/0:31,0:28:59.67:0,60,492	0/0:23,0:23:59.72:0,60,490	0/0:9,0:9:17.99:0,18,156	0/0:29,0:28:66.23:0,66,568	0/0:14,0:13:38.35:0,38,321	1/1:8,4:31:73.92:582,74,0	1/1:12,1:13:9.11:180,9,0	0/0:16,0:16:32.98:0,33,291	0/0:14,0:14:21.93:0,22,216	0/0:22,0:22:59.88:0,60,555	0/0:8,0:8:17.89:0,18,151	0/0:14,0:12:26.89:0,27,260	0/0:36,0:31:60.26:0,60,531	1/1:20,11:29:25.58:532,26,0	0/0:23,0:21:48.16:0,48,403	0/0:21,0:21:50.27:0,50,405	0/0:3,0:3:5.20:0,5,29	0/0:11,0:11:29.89:0,30,253	0/0:15,0:15:31.92:0,32,297	0/0:11,0:11:15.40:0,15,167	1/1:18,5:24:51.47:474,51,0	0/0:23,0:23:68.24:0,68,542	0/0:24,0:24:65.70:0,66,568	0/0:8,0:6:17.95:0,18,153
chr10	71206365	.	AG	A	1490.88	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.371;DP=708;FS=3.581;HRun=3;HaplotypeScore=72.1812;InbreedingCoeff=0.9998;MQ=92.81;MQ0=0;MQRankSum=-3.194;QD=29.23;ReadPosRankSum=1.965;VQSLOD=3.3140;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,154,2181	0/0:16,0:16:42.14:0,42,602	0/0:30,0:30:81.27:0,81,1140	0/0:35,0:34:99:0,99,1405	0/0:36,0:36:99:0,99,1417	0/0:21,0:21:63.18:0,63,870	0/0:17,0:17:51.17:0,51,734	0/0:41,0:41:99:0,117,1678	0/0:28,0:28:84.28:0,84,1210	0/0:20,0:20:60.15:0,60,836	0/0:13,0:13:36.12:0,36,517	0/0:24,0:24:72.24:0,72,1037	1/1:1,15:16:42.13:521,42,0	0/0:27,0:27:78.25:0,78,1102	0/0:23,0:23:66.10:0,66,930	0/0:26,0:26:75.25:0,75,1080	0/0:32,0:32:96.30:0,96,1358	0/0:29,0:29:87.27:0,87,1232	0/0:20,0:20:60.18:0,60,840	0/0:24,0:24:63.19:0,63,868	0/0:31,0:31:93.30:0,93,1309	0/0:18,0:18:45.14:0,45,630	1/1:0,14:14:32.87:409,33,0	1/1:1,20:21:57.18:704,57,0	0/0:20,0:20:60.20:0,60,864	0/0:22,0:22:60.18:0,60,811	0/0:34,0:34:99:0,99,1421	0/0:15,0:15:45.15:0,45,648
chr10	71208083	.	A	AG	2912.51	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-8.873;DP=495;FS=0.966;HRun=4;HaplotypeScore=48.3891;InbreedingCoeff=0.9931;MQ=86.82;MQ0=0;MQRankSum=-5.751;QD=30.66;ReadPosRankSum=2.318;VQSLOD=3.7662;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,26:31:75.25:1016,75,0	1/1:0,8:8:21.07:287,21,0	0/0:14,0:14:39.10:0,39,429	0/0:25,0:25:57.12:0,57,615	0/0:18,0:18:47.33:0,47,506	0/0:22,0:22:63.13:0,63,699	0/0:19,0:19:54.15:0,54,613	0/0:31,0:31:78.22:0,78,885	0/0:24,0:24:66.19:0,66,749	1/1:1,17:18:51.17:697,51,0	1/1:1,9:10:24.08:328,24,0	0/0:20,0:20:57.14:0,57,634	0/0:9,0:9:24.07:0,24,272	0/0:21,0:21:60.14:0,60,662	0/0:16,0:16:48.13:0,48,537	0/0:12,0:11:36.10:0,36,408	0/0:31,0:31:81.20:0,81,898	1/1:1,17:19:42.14:567,42,0	0/0:12,0:12:36.09:0,36,400	0/0:12,0:12:33.08:0,33,361	0/0:15,0:15:42.10:0,42,466	0/0:6,0:6:18.05:0,18,204	0/0:10,0:10:27.08:0,27,306	0/0:19,0:19:54.14:0,54,603	1/1:2,7:9:15.05:204,15,0	0/0:24,0:24:69.18:0,69,767	0/0:20,0:20:60.12:0,60,651	0/0:20,0:20:48.14:0,48,543
chr10	71209298	.	TACAC	T	4073.88	PASS	AB=0.700;AC=35;AF=0.673;AN=52;BaseQRankSum=-1.033;DP=495;FS=0.000;HRun=0;HaplotypeScore=95.4044;InbreedingCoeff=0.2845;MQ=64.69;MQ0=6;MQRankSum=-1.024;QD=11.28;ReadPosRankSum=1.475;VQSLOD=3.0080;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:26:8.23:0,8,37	0/0:4,0:9:5.27:0,5,24	./.	./.	0/1:14,5:19:27.12:153,0,27	1/1:10,11:20:18.06:282,18,0	1/1:5,7:13:18.05:263,18,0	0/0:20,0:20:3.84:0,4,22	0/1:7,9:17:9.37:242,0,9	0/0:11,0:22:34.63:0,35,294	0/1:5,1:13:25.48:36,0,25	1/1:8,10:20:23.60:335,24,0	1/1:5,0:15:18.02:166,18,0	1/1:9,4:13:6.02:94,6,0	0/1:9,7:17:0.44:129,0,0	1/1:12,8:21:21.06:310,21,0	1/1:13,8:22:15.04:216,15,0	0/0:5,0:13:16.52:0,17,74	1/1:9,6:16:5.51:196,6,0	1/1:8,13:21:27.09:406,27,0	1/1:8,3:11:3.01:47,3,0	1/1:4,5:9:6.02:94,6,0	1/1:8,0:20:26.99:243,27,0	1/1:10,0:16:12.01:112,12,0	0/1:13,1:23:54.23:54,0,121	1/1:10,13:22:33.02:463,33,0	0/1:13,1:16:11.70:39,0,12	0/1:6,6:12:64.90:195,0,65
chr10	71211543	.	CTAT	C	3873.64	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=12.224;DP=589;FS=0.895;HRun=0;HaplotypeScore=85.0616;InbreedingCoeff=0.9665;MQ=63.40;MQ0=0;MQRankSum=0.672;QD=27.09;ReadPosRankSum=3.082;VQSLOD=3.4640;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,37:39:63.21:942,63,0	1/1:1,5:6:9.03:134,9,0	./.	0/0:6,0:6:6.59:0,7,51	0/0:35,0:35:96.33:0,96,1951	0/0:22,0:22:57.20:0,57,1153	0/0:14,0:14:36.12:0,36,695	0/0:37,0:37:81.28:0,81,1550	0/0:13,0:13:33.11:0,33,692	1/1:7,24:31:72.23:1048,72,0	1/1:5,18:23:36.12:538,36,0	0/0:20,0:20:57.19:0,57,1029	0/0:25,0:25:66.23:0,66,1355	0/0:14,0:14:30.10:0,30,532	0/0:26,0:26:63.21:0,63,1213	0/0:18,0:18:54.18:0,54,1084	0/0:26,0:26:66.15:0,66,1235	1/1:4,17:21:33.11:493,33,0	0/0:25,0:25:60.21:0,60,1176	0/0:25,0:25:60.20:0,60,1177	0/0:10,0:10:24.08:0,24,500	0/0:8,0:8:18.06:0,18,377	0/0:18,0:18:51.17:0,51,1006	0/0:11,0:11:27.09:0,27,565	1/1:1,22:23:48.16:718,48,0	0/0:31,0:31:46.90:0,47,1736	0/0:30,0:29:78.27:0,78,1583	0/0:28,0:28:72.25:0,72,1425
chr10	71212567	.	A	AAAAT	7912.93	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=8.522;DP=595;FS=0.396;HRun=0;HaplotypeScore=116.9353;InbreedingCoeff=0.8920;MQ=58.36;MQ0=4;MQRankSum=-6.621;QD=36.47;ReadPosRankSum=1.999;VQSLOD=4.9898;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:35,4:36:81.28:1809,81,0	1/1:8,0:8:18.06:404,18,0	0/1:24,0:19:12.16:12,0,190	0/0:18,0:13:14.83:0,15,198	0/0:23,0:23:45.15:0,45,781	0/0:20,0:20:51.17:0,51,895	0/0:17,0:17:40.52:0,41,716	0/0:33,0:32:54.16:0,54,881	0/0:17,0:17:39.06:0,39,602	1/1:26,8:31:63.21:1321,63,0	1/1:24,3:26:48.16:1042,48,0	0/0:18,0:18:39.13:0,39,694	1/1:8,11:18:39.12:927,39,0	0/0:15,0:15:36.10:0,36,561	0/0:21,0:21:48.05:0,48,706	0/0:13,0:13:30.10:0,30,529	0/0:34,0:34:84.28:0,84,1468	1/1:14,2:16:33.11:793,33,0	0/0:29,0:28:2.60:0,3,881	0/0:17,0:17:42.14:0,42,747	0/0:25,0:24:51.17:0,51,908	0/0:13,0:13:27.09:0,27,480	1/1:8,9:17:24.08:563,24,0	1/1:13,7:17:24.01:534,24,0	1/1:11,2:12:21.07:507,21,0	0/0:26,0:26:57.19:0,57,964	0/0:29,0:27:75.22:0,75,1263	0/0:10,0:10:27.09:0,27,457
chr10	71212575	.	T	TA	2206.76	PASS	AB=0.813;AC=14;AF=0.250;AN=56;BaseQRankSum=14.903;DP=532;FS=0.000;HRun=3;HaplotypeScore=94.4328;InbreedingCoeff=0.3221;MQ=57.87;MQ0=10;MQRankSum=-6.616;QD=11.86;ReadPosRankSum=3.844;VQSLOD=1.9627;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,27:33:61.86:720,62,0	1/1:0,6:6:17.94:178,18,0	0/1:13,0:10:7.54:8,0,153	0/1:12,0:7:5.96:6,0,115	0/0:21,0:21:53.85:0,54,710	0/0:19,0:19:51.17:0,51,711	0/0:17,0:17:28.36:0,28,594	0/0:25,0:24:60.18:0,60,794	0/0:16,0:16:48.11:0,48,624	0/1:17,14:27:44.94:419,0,45	0/1:7,12:18:12.42:352,0,12	0/0:21,0:21:48.16:0,48,659	0/1:14,0:14:1:124,0,1	0/0:15,0:15:42.14:0,42,581	0/0:17,0:17:47.51:0,48,614	0/0:14,0:14:42.12:0,42,559	0/0:37,0:36:99:0,105,1432	1/1:3,10:13:31.15:271,31,0	0/0:26,0:25:66.22:0,66,912	0/0:17,0:17:45.15:0,45,615	0/0:24,0:22:54.18:0,54,750	0/0:13,0:12:33.09:0,33,439	0/1:9,1:13:23.03:71,0,23	0/1:18,0:16:67.37:67,0,85	0/1:2,9:10:28.40:163,0,28	0/0:23,0:23:66.68:0,67,894	0/0:31,0:29:82.51:0,83,1106	0/0:10,0:9:27.09:0,27,372
chr10	71212576	.	CT	C	476.22	PASS	AB=0.863;AC=21;AF=0.375;AN=56;BaseQRankSum=11.947;DP=533;FS=8.521;HRun=13;HaplotypeScore=101.4527;InbreedingCoeff=0.5882;MQ=57.66;MQ0=11;MQRankSum=-3.042;QD=2.03;ReadPosRankSum=2.888;VQSLOD=-0.4495;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:35:36.16:101,36,0	1/1:6,0:6:6.70:20,7,0	0/1:12,0:9:1.24:1,0,44	0/0:11,0:6:3:0,3,27	0/1:19,2:21:7.75:8,0,237	0/0:19,0:19:42.06:0,42,404	0/0:15,0:16:29.87:0,30,270	0/0:22,1:22:11.78:0,12,234	0/0:15,0:15:36.03:0,36,337	1/1:24,0:27:5.98:38,6,0	1/1:18,0:19:18.18:57,18,0	0/0:22,2:24:23.02:0,23,349	1/1:4,11:13:31.13:204,31,0	0/0:15,0:15:27.03:0,27,258	0/0:14,1:17:14:0,14,280	0/0:13,1:14:8.13:0,8,235	0/0:37,0:37:83.97:0,84,802	1/1:13,0:13:10.79:32,11,0	0/0:25,0:25:45.03:0,45,425	0/1:15,2:18:10.81:11,0,220	0/0:22,1:23:34.38:0,34,397	0/0:13,0:14:17.03:0,17,184	0/1:6,6:12:21.60:63,0,22	1/1:8,10:15:10.32:98,10,0	1/1:11,0:10:9.72:30,10,0	0/1:19,2:22:2.57:3,0,332	0/0:29,0:29:44.51:0,45,472	0/0:10,0:9:12.02:0,12,117
chr10	71213210	.	GTA	G	1404.35	PASS	AB=0.962;AC=17;AF=0.327;AN=52;BaseQRankSum=4.968;DP=558;FS=1.569;HRun=0;HaplotypeScore=85.9379;InbreedingCoeff=0.2698;MQ=47.50;MQ0=38;MQRankSum=-0.950;QD=5.76;ReadPosRankSum=-2.902;VQSLOD=2.5802;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,4:27:22.54:284,0,23	1/1:5,1:5:5.99:49,6,0	./.	./.	0/0:24,0:20:32.79:0,33,407	0/1:14,1:13:64.95:70,0,65	0/0:21,3:14:14.94:0,15,132	0/0:34,0:19:17.81:0,18,131	0/0:20,0:19:15.08:0,15,388	1/1:19,0:19:42.54:335,43,0	1/1:18,1:19:20.61:167,21,0	0/0:31,0:29:20.28:0,20,446	0/1:16,2:16:65.73:131,0,66	0/0:13,2:12:15.51:0,16,228	0/0:30,0:28:48.46:0,48,512	0/0:17,0:17:14.09:0,14,305	0/0:22,0:21:36.26:0,36,484	0/1:14,0:12:23.75:24,0,89	0/1:16,0:15:10.68:11,0,101	0/0:16,0:16:0.89:0,1,237	0/0:41,0:37:49.72:0,50,439	0/0:8,0:6:9.02:0,9,115	0/0:5,0:18:11.58:0,12,67	1/1:25,9:29:38.40:376,38,0	1/1:13,0:12:0.08:66,0,0	0/1:30,0:26:11.76:12,0,477	0/1:26,0:25:48.58:49,0,379	0/0:11,0:8:21.04:0,21,234
chr10	71213404	.	CT	C	4694.70	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.657;DP=614;FS=6.887;HRun=1;HaplotypeScore=75.9042;InbreedingCoeff=0.9995;MQ=62.51;MQ0=6;MQRankSum=-0.464;QD=37.56;ReadPosRankSum=3.612;VQSLOD=5.4338;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:40:99:1510,108,0	1/1:0,14:14:42.14:587,42,0	0/0:23,0:19:54.16:0,54,828	0/0:20,0:19:54.18:0,54,846	0/0:21,0:20:54.18:0,54,863	0/0:10,0:10:30.10:0,30,480	0/0:16,0:16:45.15:0,45,719	0/0:33,0:33:96.31:0,96,1494	0/0:21,0:21:63.20:0,63,983	1/1:1,16:16:48.16:668,48,0	1/1:1,14:14:36.12:504,36,0	0/0:20,0:20:57.19:0,57,911	0/0:16,0:16:48.16:0,48,766	0/0:24,0:24:66.23:0,66,1053	0/0:20,0:20:60.18:0,60,912	0/0:17,0:17:51.17:0,51,811	0/0:27,0:27:75.26:0,75,1199	1/1:1,21:22:54.18:755,54,0	0/0:25,0:25:75.24:0,75,1175	0/0:29,0:28:66.20:0,66,1007	0/0:36,0:36:99:0,102,1602	0/0:15,0:15:45.15:0,45,719	0/0:17,0:17:48.16:0,48,764	0/0:34,0:34:99:0,102,1602	1/1:0,16:16:48.16:671,48,0	0/0:24,1:25:30.26:0,30,1039	0/0:31,0:31:87.74:0,88,1341	0/0:9,0:9:27.09:0,27,432
chr10	71213541	.	T	TA	5831.32	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-13.575;DP=605;FS=0.000;HRun=7;HaplotypeScore=56.4399;InbreedingCoeff=0.9933;MQ=79.93;MQ0=0;MQRankSum=-1.652;QD=30.06;ReadPosRankSum=3.867;VQSLOD=4.9958;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:81.25:979,81,0	1/1:1,6:7:15.04:181,15,0	0/0:20,0:19:54.08:0,54,520	0/0:12,0:12:13.60:0,14,260	0/0:28,0:28:75.12:0,75,724	0/0:20,0:19:54.07:0,54,515	0/0:13,0:13:39.06:0,39,377	0/0:33,0:33:75.06:0,75,706	0/0:21,0:21:54.08:0,54,521	1/1:2,23:25:66.20:797,66,0	1/1:1,22:23:60.18:725,60,0	0/0:21,0:21:57.09:0,57,550	1/1:2,13:15:33.10:396,33,0	0/0:22,0:22:57.08:0,57,550	0/0:12,0:12:33.05:0,33,319	0/0:25,0:25:69.11:0,69,666	0/0:22,0:22:63.07:0,63,601	1/1:3,15:18:45.14:543,45,0	0/0:33,0:33:81.10:0,81,773	0/0:28,0:28:78.12:0,78,753	0/0:15,0:15:42.05:0,42,400	0/0:13,0:13:33.05:0,33,318	1/1:6,21:27:57.17:688,57,0	1/1:1,25:26:72.22:870,72,0	1/1:1,19:20:54.17:652,54,0	0/0:30,1:31:47.89:0,48,742	0/0:31,0:30:90.10:0,90,855	0/0:11,0:11:21.03:0,21,203
chr10	71215752	.	G	GA	4711.46	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-10.977;DP=636;FS=11.047;HRun=4;HaplotypeScore=60.8779;InbreedingCoeff=0.9987;MQ=89.91;MQ0=0;MQRankSum=-1.061;QD=34.64;ReadPosRankSum=0.318;VQSLOD=4.6766;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,44:45:99:1558,114,0	1/1:1,17:18:42.14:574,42,0	0/0:23,0:23:45.17:0,45,594	0/0:25,0:25:66.15:0,66,727	0/0:18,0:18:45.10:0,45,491	0/0:12,0:12:21.05:0,21,238	0/0:20,0:20:60.16:0,60,671	0/0:27,0:27:78.21:0,78,877	0/0:30,0:30:87.23:0,87,976	1/1:0,25:25:75.25:1020,75,0	1/1:0,15:15:36.12:492,36,0	0/0:24,0:24:63.18:0,63,715	0/0:16,0:16:39.11:0,39,442	0/0:19,0:19:48.14:0,48,544	0/0:33,0:33:90.26:0,90,1021	0/0:21,0:21:63.18:0,63,715	0/0:18,0:18:48.12:0,48,534	1/1:2,15:17:48.16:656,48,0	0/0:28,0:27:72.20:0,72,816	0/0:18,0:18:45.13:0,45,510	0/0:38,0:38:99:0,114,1293	0/0:23,0:23:63.16:0,63,702	0/0:18,0:18:39.11:0,39,442	0/0:27,0:27:78.22:0,78,884	1/1:2,14:16:30.10:411,30,0	0/0:24,1:25:31.14:0,31,731	0/0:28,0:28:81.21:0,81,908	0/0:9,0:9:27.08:0,27,306
chr10	71216644	.	GAAAAAA	G	2056.89	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.303;DP=434;FS=0.595;HRun=17;HaplotypeScore=90.4860;InbreedingCoeff=0.9388;MQ=54.46;MQ0=6;MQRankSum=-7.566;QD=25.39;ReadPosRankSum=5.412;VQSLOD=0.9533;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:21:35.94:615,36,0	1/1:0,3:3:9.03:157,9,0	0/0:14,0:5:11.83:0,12,201	0/0:13,0:7:12.51:0,13,279	0/0:16,0:16:27.56:0,28,773	0/0:9,0:13:30.10:0,30,705	0/0:20,0:25:51.58:0,52,1412	0/0:15,0:17:39.12:0,39,899	0/0:12,0:11:18.06:0,18,415	1/1:4,9:13:23.91:408,24,0	1/1:4,14:19:32.73:498,33,0	0/0:11,0:11:24.08:0,24,582	0/0:2,0:5:9:0,9,77	0/0:16,0:16:30.10:0,30,803	0/0:14,0:15:30.10:0,30,766	0/0:11,0:11:24.07:0,24,598	0/0:28,0:36:60.21:0,60,1589	1/1:5,7:13:8.93:140,9,0	0/0:11,0:12:24.08:0,24,607	0/0:13,0:16:30.10:0,30,705	0/0:15,0:16:23.57:0,24,449	0/0:12,0:13:15.05:0,15,377	0/0:9,0:16:23.29:0,23,198	0/0:6,0:24:12.97:0,13,346	1/1:2,10:12:24.03:419,24,0	0/0:12,0:19:39.13:0,39,893	0/0:14,0:18:45.15:0,45,1093	0/0:12,0:11:30.10:0,30,748
chr10	71217622	.	G	GCACACA	1790.80	PASS	AB=0.556;AC=19;AF=0.352;AN=54;BaseQRankSum=0.013;DP=347;FS=7.192;HRun=0;HaplotypeScore=75.1977;InbreedingCoeff=0.7032;MQ=61.36;MQ0=6;MQRankSum=-4.045;QD=16.58;ReadPosRankSum=-1.102;VQSLOD=1.6708;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:21:6.51:89,7,0	1/1:4,0:4:9.02:174,9,0	0/0:13,0:2:2.68:0,3,11	0/0:21,0:9:4.54:0,5,27	0/0:8,0:10:18.06:0,18,341	0/0:10,0:13:24.33:0,24,478	0/0:15,0:17:35.66:0,36,677	0/0:12,0:12:18.66:0,19,320	0/0:9,0:10:21.07:0,21,412	1/1:10,7:17:21.04:521,21,0	1/1:5,6:12:8.92:212,9,0	0/0:10,0:11:24.06:0,24,412	1/1:1,0:7:12.04:154,12,0	0/0:11,0:11:27.01:0,27,453	1/1:3,0:3:2.96:19,3,0	0/1:1,0:5:30.75:31,0,58	0/0:27,0:28:41.43:0,41,1115	1/1:2,5:8:9.03:280,9,0	0/0:14,0:15:24.08:0,24,463	0/0:15,0:15:26.12:0,26,410	0/0:14,0:14:24.02:0,24,413	0/0:7,0:8:9.03:0,9,186	1/1:5,6:13:6.02:195,6,0	0/0:4,8:12:0:0,0,0	1/1:8,7:15:14.96:300,15,0	0/0:14,0:13:0.06:0,0,414	0/0:12,0:12:27.06:0,27,453	./.
chr10	71218504	.	G	GAGGAGAAGGA	9946.43	PASS	AB=0.864;AC=17;AF=0.304;AN=56;BaseQRankSum=-0.410;DP=686;FS=4.901;HRun=0;HaplotypeScore=205.7878;InbreedingCoeff=0.8206;MQ=53.59;MQ0=16;MQRankSum=-8.909;QD=46.05;ReadPosRankSum=-2.245;VQSLOD=3.8761;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,3:35:52.75:2511,53,0	1/1:0,6:8:5.97:172,6,0	0/0:35,0:8:11.89:0,12,246	0/0:51,0:13:13.84:0,14,218	0/0:23,0:23:54.17:0,54,1483	0/0:19,0:19:34.31:0,34,1151	0/0:25,0:25:43.06:0,43,1476	0/0:15,0:13:15.01:0,15,322	0/0:25,0:25:67.47:0,67,2037	1/1:6,36:45:87.19:2736,87,0	1/1:5,10:16:18.06:601,18,0	0/0:22,0:22:60.21:0,60,1602	1/1:5,22:29:11.96:612,12,0	0/0:17,0:17:45.15:0,45,1342	0/0:24,0:24:63.20:0,63,1738	0/0:29,0:29:84.29:0,84,2307	0/0:24,0:25:4.94:0,5,1474	0/1:16,1:19:99:671,0,100	0/0:19,0:17:30.09:0,30,772	0/0:18,0:18:51.17:0,51,1441	0/0:28,0:27:58.13:0,58,1802	0/0:24,0:24:66.23:0,66,1953	1/1:3,16:23:17.98:777,18,0	1/1:19,3:23:36.05:818,36,0	1/1:2,15:17:1.45:1049,1,0	0/0:29,0:29:66.21:0,66,1924	0/0:34,0:33:96.33:0,96,2896	0/0:7,0:7:18.06:0,18,525
chr10	71218751	.	AAGG	A	6299.01	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.585;DP=699;FS=11.154;HRun=0;HaplotypeScore=117.5492;InbreedingCoeff=0.9990;MQ=67.29;MQ0=3;MQRankSum=-3.695;QD=41.99;ReadPosRankSum=2.465;VQSLOD=5.7086;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,23:30:43.30:1175,43,0	1/1:0,13:13:30.10:509,30,0	0/0:28,0:16:32.28:0,32,678	0/0:52,0:36:69.14:0,69,1325	0/0:28,0:28:81.28:0,81,1822	0/0:21,0:21:57.63:0,58,1185	0/0:18,0:18:51.09:0,51,1114	0/0:27,0:26:74.60:0,75,1567	0/0:25,0:25:72.22:0,72,1565	1/1:3,32:35:96.31:1565,96,0	1/1:2,23:25:63.10:1006,63,0	0/0:28,0:28:84.23:0,84,1751	0/0:21,0:21:63.17:0,63,1316	0/0:16,0:16:48.16:0,48,1106	0/0:29,0:29:87.30:0,87,1980	0/0:22,0:22:66.20:0,66,1393	0/0:23,0:23:59.99:0,60,1334	1/1:7,14:21:57.20:971,57,0	0/0:14,0:14:42.13:0,42,922	0/0:32,0:32:96.30:0,96,2063	0/0:23,0:23:66.22:0,66,1469	0/0:20,0:20:54.12:0,54,1189	0/0:33,0:33:99:0,99,2061	0/0:26,0:26:77.97:0,78,1640	1/1:2,24:26:63.22:1073,63,0	0/0:28,0:28:84.28:0,84,1883	0/0:28,0:27:78.27:0,78,1773	0/0:7,0:7:21.07:0,21,484
chr10	71218908	.	GAAGAAGAAAAGAAGAAGA	G	6681.68	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=11.248;DP=635;FS=4.218;HRun=0;HaplotypeScore=300.3408;InbreedingCoeff=0.8657;MQ=61.90;MQ0=3;MQRankSum=-8.222;QD=54.77;ReadPosRankSum=-0.583;VQSLOD=3.7883;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,4:19:38.96:950,39,0	1/1:1,6:6:12.04:609,12,0	0/0:37,0:21:51.94:0,52,1676	0/0:34,0:13:21.68:0,22,908	0/0:27,0:27:75.26:0,75,4577	0/0:18,0:18:29.80:0,30,2775	0/1:21,0:21:12.55:13,0,3428	0/0:23,0:23:58.47:0,58,2923	0/0:28,0:28:72.03:0,72,4890	1/1:4,25:29:72.20:2384,72,0	1/1:0,12:12:27.04:1133,27,0	0/0:29,0:29:72.25:0,72,5406	0/0:22,0:22:66.23:0,66,4671	0/0:21,0:21:63.19:0,63,4172	0/0:28,0:28:78.27:0,78,5928	0/0:17,0:17:45.15:0,45,3033	0/0:29,0:29:47.20:0,47,4295	1/1:13,1:15:5.07:777,5,0	0/0:22,0:22:54.18:0,54,3179	0/0:18,0:17:45.14:0,45,3201	0/0:15,0:15:17.24:0,17,2552	0/0:23,0:23:60.20:0,60,4359	0/0:14,0:14:36.12:0,36,2594	0/0:35,0:36:83.12:0,83,6587	1/1:3,16:19:18.06:816,18,0	0/0:32,0:32:87.29:0,87,5766	0/0:30,0:30:87.30:0,87,6073	0/0:8,0:8:15.02:0,15,1064
chr10	71218914	.	GA	G	512.92	PASS	AB=0.786;AC=9;AF=0.161;AN=56;BaseQRankSum=11.434;DP=621;FS=10.899;HRun=4;HaplotypeScore=115.7918;InbreedingCoeff=0.7015;MQ=63.54;MQ0=2;MQRankSum=-9.475;QD=5.58;ReadPosRankSum=1.763;VQSLOD=-0.2396;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,7:18:2.39:112,0,2	1/1:6,0:6:9.93:47,10,0	0/0:40,0:23:47.03:0,47,596	0/0:34,0:12:24.97:0,25,303	0/0:27,0:27:78.25:0,78,1068	0/0:18,0:18:40.79:0,41,619	0/0:21,0:22:64.89:0,65,820	0/0:23,0:22:62.95:0,63,847	0/0:29,0:29:67.04:0,67,1067	1/1:25,0:25:34.83:241,35,0	1/1:12,0:12:15.84:51,16,0	0/0:26,0:26:78.24:0,78,1067	0/0:24,0:24:72.24:0,72,1005	0/0:23,0:23:66.22:0,66,919	0/0:29,0:29:87.29:0,87,1212	0/0:17,0:17:48.13:0,48,638	0/0:28,0:28:65.34:0,65,935	0/1:9,6:15:17.19:198,0,17	0/0:18,0:18:51.16:0,51,696	0/0:16,0:15:42.14:0,42,586	0/0:15,0:15:28.99:0,29,543	0/0:21,0:21:60.20:0,60,837	0/0:15,0:15:42.13:0,42,568	0/0:40,0:40:78.87:0,79,1358	0/1:16,0:16:1.85:18,0,2	0/0:30,0:30:84.28:0,84,1170	0/0:29,0:29:87.29:0,87,1202	0/0:5,0:5:12.04:0,12,168
chr10	71219037	.	G	GAGA	4291.46	PASS	AB=0.967;AC=7;AF=0.125;AN=56;BaseQRankSum=-3.622;DP=756;FS=2.587;HRun=0;HaplotypeScore=119.2030;InbreedingCoeff=0.8447;MQ=56.16;MQ0=6;MQRankSum=3.254;QD=31.79;ReadPosRankSum=3.195;VQSLOD=5.4900;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:72.36:0,72,1054	0/0:9,0:9:21.07:0,21,305	0/1:28,0:9:7.55:8,0,155	0/0:40,0:10:11.20:0,11,171	0/0:29,0:29:66.19:0,66,897	0/0:16,0:16:42.09:0,42,578	0/0:25,0:25:57.16:0,57,773	0/0:39,0:38:69.20:0,69,953	0/0:30,0:30:81.26:0,81,1168	0/0:42,0:42:99:0,122,1662	0/0:19,0:19:41.86:0,42,536	0/0:23,0:23:54.18:0,54,792	1/1:13,15:29:69.22:1257,69,0	0/0:25,0:25:60.15:0,60,844	0/0:26,0:26:64.41:0,64,888	0/0:15,0:15:42.12:0,42,600	0/0:40,0:40:67.95:0,68,1290	0/0:18,0:18:34.05:0,34,534	0/0:14,0:14:42.13:0,42,587	0/0:25,0:25:72.21:0,72,1007	0/0:26,0:26:57.17:0,57,798	0/0:29,0:28:72.21:0,72,1023	1/1:10,28:38:75.21:1508,75,0	1/1:19,20:39:70.67:1519,71,0	0/0:31,0:31:60:0,60,1036	0/0:25,0:25:63.20:0,63,899	0/0:29,0:29:72.23:0,72,1044	0/0:8,0:7:18.06:0,18,265
chr10	71219106	.	GAGA	G	2875.65	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.789;DP=700;FS=0.952;HRun=0;HaplotypeScore=113.9523;InbreedingCoeff=0.9725;MQ=63.59;MQ0=6;MQRankSum=1.883;QD=33.44;ReadPosRankSum=0.941;VQSLOD=4.3310;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:72.63:0,73,1423	0/0:12,0:12:36.12:0,36,764	0/0:39,0:18:26.22:0,26,438	0/0:44,0:20:8:0,8,263	0/0:25,1:26:25.97:0,26,1280	0/0:17,0:17:48.15:0,48,972	0/0:21,0:21:54.18:0,54,1093	0/0:29,0:29:60.15:0,60,1009	0/0:22,0:22:60.17:0,60,1133	0/0:47,0:47:99:0,123,2485	0/0:21,0:21:57.18:0,57,1148	0/0:28,0:28:72.25:0,72,1546	1/1:7,24:31:78.17:1123,78,0	0/0:25,0:25:72.24:0,72,1494	0/0:26,0:26:69.23:0,69,1444	0/0:20,0:20:57.18:0,57,1136	0/0:24,0:25:68.10:0,68,1224	0/0:20,0:20:60.11:0,60,1100	0/0:12,0:12:30.10:0,30,634	0/0:26,0:26:66.21:0,66,1306	0/0:24,0:24:66.23:0,66,1401	0/0:20,0:20:45.14:0,45,910	1/1:9,16:25:57.14:805,57,0	1/1:8,22:30:75.18:1090,75,0	0/0:18,0:18:48.16:0,48,992	0/0:28,0:28:81.28:0,81,1729	0/0:25,0:25:66.23:0,66,1381	0/0:7,0:7:21.07:0,21,451
chr10	71219215	.	A	AAGG	10926.12	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=7.672;DP=666;FS=1.870;HRun=0;HaplotypeScore=108.0778;InbreedingCoeff=0.9973;MQ=68.43;MQ0=5;MQRankSum=-3.502;QD=48.35;ReadPosRankSum=2.248;VQSLOD=6.6508;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,18:27:74.03:1322,74,0	1/1:1,7:9:15.05:317,15,0	0/0:30,0:22:34.97:0,35,419	0/0:39,0:24:29.79:0,30,333	0/0:35,0:35:84.16:0,84,1206	0/0:18,0:18:51.17:0,51,773	0/0:19,0:19:45.15:0,45,680	0/0:19,0:17:33.03:0,33,445	0/0:23,0:23:66.19:0,66,944	1/1:6,34:40:99:1838,99,0	1/1:2,17:19:45.10:835,45,0	0/0:27,0:27:75.22:0,75,1075	1/1:11,21:32:93.27:1811,93,0	0/0:16,0:16:39.13:0,39,589	0/0:22,0:22:66.17:0,66,933	0/0:19,0:19:48.16:0,48,725	0/0:18,0:18:47.43:0,47,687	1/1:5,13:18:54.06:970,54,0	0/0:15,0:15:36.11:0,36,524	0/0:15,0:15:39.06:0,39,525	0/0:20,0:20:54.18:0,54,819	0/0:24,0:24:63.19:0,63,912	1/1:2,17:20:48.16:1013,48,0	1/1:10,21:31:75.26:1550,75,0	1/1:3,26:29:60.21:1269,60,0	0/0:37,1:37:38.71:0,39,1357	0/0:31,0:31:78.13:0,78,1152	0/0:11,0:11:33.11:0,33,496
chr10	71219393	.	GGAA	G	5051.11	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=12.917;DP=734;FS=0.351;HRun=0;HaplotypeScore=124.2875;InbreedingCoeff=0.8849;MQ=54.37;MQ0=22;MQRankSum=-0.263;QD=23.71;ReadPosRankSum=1.039;VQSLOD=4.9579;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,18:39:98.11:1259,98,0	1/1:2,11:13:26.94:359,27,0	0/0:19,0:3:2.99:0,3,24	0/1:34,0:9:5.51:6,0,61	0/0:21,0:21:57.14:0,57,1031	0/0:19,0:19:51.11:0,51,990	0/0:23,0:22:66.17:0,66,1185	0/0:35,0:29:75.07:0,75,1009	0/0:31,0:31:56.26:0,56,1341	1/1:8,32:38:99:1393,102,0	1/1:4,23:27:41.95:546,42,0	0/0:20,0:20:51.15:0,51,1004	0/0:19,0:19:57.02:0,57,939	0/0:18,0:17:45.09:0,45,740	0/0:26,0:26:69.19:0,69,1314	0/0:21,0:21:63.17:0,63,1105	0/0:38,0:38:99:0,111,2087	1/1:20,8:28:14.97:664,15,0	0/0:19,0:14:33.05:0,33,490	0/0:22,0:20:60.16:0,60,1070	0/0:35,0:32:37.14:0,37,1358	0/0:20,0:20:50.86:0,51,908	0/0:25,0:25:60.09:0,60,1009	0/0:34,0:34:62.21:0,62,1429	1/1:3,28:31:54.18:825,54,0	0/0:42,0:42:24.67:0,25,1891	0/0:26,0:24:63.20:0,63,1240	0/0:8,0:8:24.07:0,24,461
chr10	71219808	.	AAAG	A	2602.08	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.006;DP=674;FS=5.368;HRun=0;HaplotypeScore=109.5119;InbreedingCoeff=0.9961;MQ=66.08;MQ0=3;MQRankSum=-0.768;QD=34.69;ReadPosRankSum=1.865;VQSLOD=4.3644;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:75.26:0,75,1598	0/0:8,0:8:24.08:0,24,524	0/0:45,0:23:42.60:0,43,609	0/0:47,0:26:33.34:0,33,788	0/0:22,0:22:57.20:0,57,1240	0/0:16,0:16:39.13:0,39,835	0/0:15,0:15:25.55:0,26,793	0/0:16,0:15:36.12:0,36,786	0/0:33,0:33:96.29:0,96,1964	0/0:28,0:28:75.26:0,75,1589	0/0:17,0:17:48.11:0,48,916	0/0:23,0:23:66.23:0,66,1429	1/1:7,15:22:60.17:898,60,0	0/0:23,0:23:63.22:0,63,1347	0/0:27,0:27:75.71:0,76,1589	0/0:20,0:20:57.18:0,57,1205	0/0:20,0:20:55.07:0,55,1102	0/0:11,0:11:18.81:0,19,517	0/0:26,0:25:72.25:0,72,1566	0/0:30,0:30:75.25:0,75,1573	0/0:26,0:26:75.26:0,75,1592	0/0:23,0:23:66.22:0,66,1401	1/1:1,24:25:54.01:856,54,0	1/1:9,19:28:68.86:991,69,0	0/0:17,0:17:45.15:0,45,984	0/0:34,0:34:90.29:0,90,1886	0/0:31,0:31:90.28:0,90,1864	0/0:11,0:11:33.11:0,33,717
chr10	71219927	.	GAGA	G	5273.72	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=9.745;DP=691;FS=5.767;HRun=0;HaplotypeScore=124.7712;InbreedingCoeff=0.9227;MQ=58.12;MQ0=5;MQRankSum=0.754;QD=26.91;ReadPosRankSum=1.736;VQSLOD=4.9329;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:86.19:0,86,1570	1/1:0,11:11:33.05:437,33,0	0/0:22,0:10:9.02:0,9,141	0/0:26,0:15:9.52:0,10,258	0/0:26,0:26:60.16:0,60,1054	0/0:22,0:22:57.16:0,57,1063	0/1:21,0:21:1.07:1,0,698	0/0:29,0:26:54.01:0,54,895	0/0:26,0:26:57.20:0,57,1096	1/1:20,17:35:84.28:1197,84,0	1/1:3,22:24:54.13:734,54,0	0/0:18,0:18:51:0,51,916	1/1:5,29:34:69.15:990,69,0	0/0:24,0:24:57.20:0,57,1107	0/0:32,0:32:81.26:0,81,1524	0/0:27,0:27:69.24:0,69,1366	0/0:33,0:33:15.61:0,16,1221	0/0:12,0:13:15.55:0,16,103	0/0:23,0:19:48.16:0,48,893	0/0:25,0:24:41.33:0,41,1171	0/0:33,0:33:84.27:0,84,1629	0/0:30,0:29:75.23:0,75,1415	1/1:0,19:19:39.05:564,39,0	1/1:15,11:26:46.97:744,47,0	1/1:4,19:23:42.14:607,42,0	0/0:25,0:25:66.23:0,66,1323	0/0:16,0:16:45.15:0,45,897	0/0:7,0:7:18.06:0,18,354
chr10	71220025	.	GAGA	G	4313.45	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.649;DP=761;FS=1.759;HRun=0;HaplotypeScore=126.8007;InbreedingCoeff=0.9965;MQ=67.18;MQ0=3;MQRankSum=1.515;QD=36.55;ReadPosRankSum=2.179;VQSLOD=5.7436;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,11:20:47.78:674,48,0	1/1:0,5:5:15.05:241,15,0	0/0:35,0:24:29.53:0,30,833	0/0:48,0:25:31.34:0,31,532	0/0:34,0:34:93.31:0,93,1955	0/0:20,0:20:57.13:0,57,1113	0/0:20,0:19:48.16:0,48,1024	0/0:39,0:38:99:0,105,2076	0/0:43,0:43:99:0,120,2521	1/1:3,35:33:90.25:1361,90,0	1/1:1,22:21:51.13:791,51,0	0/0:30,0:30:84.27:0,84,1793	0/0:23,0:23:69.24:0,69,1483	0/0:27,0:27:81.24:0,81,1584	0/0:29,0:29:75.24:0,75,1538	0/0:28,0:28:81.28:0,81,1770	0/0:36,0:36:99:0,100,2024	1/1:7,7:14:33.53:507,34,0	0/0:19,0:19:54.18:0,54,1061	0/0:27,0:27:81.26:0,81,1668	0/0:27,0:26:62.78:0,63,1257	0/0:33,0:33:90.28:0,90,1814	0/0:26,0:26:78.20:0,78,1573	0/0:25,0:25:35.87:0,36,1289	1/1:1,17:17:48.10:740,48,0	0/0:33,1:34:54.26:0,54,2084	0/0:27,0:27:78.21:0,78,1566	0/0:12,0:12:36.12:0,36,708
chr10	71220709	.	AAGG	A	3691.16	PASS	AB=0.694;AC=11;AF=0.196;AN=56;BaseQRankSum=10.726;DP=698;FS=0.426;HRun=0;HaplotypeScore=106.4847;InbreedingCoeff=0.8283;MQ=59.39;MQ0=15;MQRankSum=1.703;QD=27.14;ReadPosRankSum=2.790;VQSLOD=3.4425;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,25:33:36.36:743,36,0	1/1:2,7:6:6.02:90,6,0	0/0:52,0:16:22.20:0,22,411	0/0:72,0:25:22.53:0,23,572	0/0:22,0:22:57.20:0,57,1143	0/0:14,0:14:33.11:0,33,670	0/0:14,0:14:36.12:0,36,750	0/0:27,0:27:49.04:0,49,957	0/0:17,0:17:48.15:0,48,947	1/1:6,27:32:84.28:1251,84,0	1/1:4,11:14:27.09:402,27,0	0/0:20,0:20:51.17:0,51,1006	0/0:23,0:23:57.19:0,57,1069	0/0:25,0:25:63.19:0,63,1234	0/0:24,0:24:57.20:0,57,1192	0/0:26,0:26:69.15:0,69,1356	0/0:18,0:18:34.19:0,34,733	0/1:14,11:20:18.22:668,0,18	0/0:18,0:18:45.15:0,45,917	0/0:18,0:18:45.15:0,45,943	0/0:24,0:23:56.78:0,57,1139	0/0:33,0:33:93.28:0,93,1819	0/0:30,0:30:84.29:0,84,1737	0/0:21,0:22:44.94:0,45,755	1/1:4,14:18:36.12:537,36,0	0/0:34,0:34:93.20:0,93,1830	0/0:25,0:25:63.22:0,63,1313	0/0:3,0:1:3.01:0,3,63
chr10	71221628	.	A	AAGG	10895.51	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-7.419;DP=747;FS=1.373;HRun=0;HaplotypeScore=126.5786;InbreedingCoeff=0.9194;MQ=59.16;MQ0=8;MQRankSum=0.335;QD=40.35;ReadPosRankSum=2.338;VQSLOD=6.3068;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,18:41:89.18:1716,89,0	1/1:1,10:11:21.07:455,21,0	0/0:33,0:13:29.29:0,29,313	0/0:44,0:24:40.08:0,40,506	0/0:27,0:27:78.23:0,78,1164	0/0:18,0:18:54.18:0,54,840	0/0:26,0:26:69.16:0,69,956	0/0:28,0:27:72.21:0,72,1021	0/0:30,0:30:87.23:0,87,1276	1/1:4,37:42:99:2057,111,0	1/1:2,18:21:54.18:1090,54,0	0/0:31,0:31:81.25:0,81,1217	1/1:13,16:29:72.21:1440,72,0	0/0:24,0:24:66.22:0,66,1025	0/0:24,0:24:69.21:0,69,1009	0/0:27,0:27:72.22:0,72,1077	0/1:28,0:28:33.51:34,0,772	1/1:13,9:21:43.08:819,43,0	0/0:15,0:15:36.11:0,36,539	0/0:20,0:20:54.18:0,54,838	0/0:30,0:30:72.23:0,72,1095	0/0:26,0:26:69.11:0,69,959	1/1:5,19:25:66.16:1267,66,0	1/1:12,14:26:62.61:1037,63,0	1/1:4,21:25:47.53:982,48,0	0/0:38,0:37:62.44:0,62,1221	0/0:24,0:24:61.64:0,62,955	0/0:11,0:11:25.33:0,25,396
chr10	71221679	.	GGAA	G	2891.35	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.092;DP=697;FS=0.437;HRun=0;HaplotypeScore=120.4339;InbreedingCoeff=0.9638;MQ=60.16;MQ0=6;MQRankSum=0.463;QD=28.91;ReadPosRankSum=-0.177;VQSLOD=3.8797;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:93.10:0,93,1683	0/0:10,0:10:21.06:0,21,393	0/0:29,0:8:8.99:0,9,136	0/0:32,0:21:8.20:0,8,229	0/0:21,0:21:48.16:0,48,966	0/0:23,0:23:69.16:0,69,1295	0/0:22,0:22:51.16:0,51,966	0/0:32,0:31:72.18:0,72,1097	0/0:27,0:27:72.18:0,72,1289	0/0:41,0:41:84.50:0,85,1795	0/0:21,0:21:44.90:0,45,734	0/0:27,0:27:72.19:0,72,1223	1/1:3,18:21:36.12:531,36,0	0/0:20,0:20:48.13:0,48,901	0/0:26,0:26:75.18:0,75,1351	0/0:27,0:27:69.17:0,69,1210	1/1:15,12:27:71.92:962,72,0	0/0:17,0:16:28.80:0,29,666	0/0:15,0:13:33.08:0,33,560	0/0:24,0:24:66.65:0,67,1187	0/0:36,0:36:86.21:0,86,1419	0/0:24,0:24:63.16:0,63,1132	1/1:11,13:24:63.05:799,63,0	1/1:13,15:28:60.04:758,60,0	0/0:25,0:25:66.18:0,66,1197	0/0:30,0:29:66.21:0,66,1247	0/0:20,0:20:42.13:0,42,816	0/0:11,0:11:30.08:0,30,480
chr10	71221808	.	GAAGAAA	G	5565.58	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.338;DP=695;FS=6.019;HRun=0;HaplotypeScore=173.2282;InbreedingCoeff=0.9865;MQ=61.48;MQ0=6;MQRankSum=-10.996;QD=47.57;ReadPosRankSum=0.854;VQSLOD=4.5999;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,13:23:31.82:862,32,0	1/1:1,11:12:36.12:782,36,0	0/0:27,0:19:27.51:0,28,609	0/0:26,0:14:26.21:0,26,704	0/0:39,0:39:99:0,99,2975	0/0:19,0:18:54.19:0,54,1629	0/0:15,0:15:42.14:0,42,1289	0/0:29,0:28:51.17:0,51,1441	0/0:18,0:18:48.16:0,48,1613	1/1:9,26:34:90.30:1856,90,0	1/1:5,20:25:60.19:1262,60,0	0/0:25,0:25:66.23:0,66,2142	0/0:25,0:25:51.16:0,51,1434	0/0:22,0:22:60.21:0,60,1950	0/0:35,0:35:96.31:0,96,2873	0/0:20,0:20:48.16:0,48,1427	0/0:26,0:26:47.98:0,48,1889	1/1:4,2:6:8.62:140,9,0	0/0:24,0:23:57.20:0,57,1786	0/0:40,0:40:96.33:0,96,3045	0/0:24,0:24:57.20:0,57,1871	0/0:26,0:26:69.24:0,69,2261	0/0:25,0:25:57.15:0,57,1799	0/0:29,0:29:69.64:0,70,1972	1/1:6,10:16:33.10:664,33,0	0/0:42,0:41:99:0,111,3568	0/0:23,0:23:57.20:0,57,1811	0/0:19,0:19:48.16:0,48,1610
chr10	71221854	.	G	GAGA	10092.42	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=0.058;DP=784;FS=3.742;HRun=0;HaplotypeScore=151.9211;InbreedingCoeff=0.9933;MQ=56.92;MQ0=8;MQRankSum=-3.201;QD=41.70;ReadPosRankSum=0.144;VQSLOD=6.0947;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,19:36:21.36:1340,21,0	1/1:3,13:16:42.11:848,42,0	0/0:42,0:14:18.95:0,19,290	0/0:48,0:27:21.35:0,21,386	0/0:35,0:35:99:0,99,1495	0/0:22,0:22:57.19:0,57,904	0/0:18,0:18:45.08:0,45,611	0/0:18,0:16:35.60:0,36,432	0/0:15,0:15:42.09:0,42,599	1/1:7,36:45:99:2130,111,0	1/1:4,21:25:60.08:1144,60,0	0/0:18,0:18:48.11:0,48,716	1/1:0,20:20:42.14:912,42,0	0/0:22,0:22:60.20:0,60,959	0/0:35,0:34:99:0,99,1539	0/0:23,0:23:66.17:0,66,945	0/0:31,0:31:41.45:0,41,984	1/1:8,4:12:12.50:395,12,0	0/0:19,0:15:36.03:0,36,500	0/0:38,0:38:99:0,108,1590	0/0:35,0:35:96.21:0,96,1458	0/0:21,0:21:57.15:0,57,844	1/1:2,24:29:47.85:1057,48,0	1/1:17,17:35:61.32:1449,61,0	1/1:4,18:23:30.84:818,31,0	0/0:45,0:45:99:0,129,1877	0/0:24,0:24:66.21:0,66,1028	0/0:30,0:30:90.31:0,90,1440
chr10	71222097	.	CAGG	C	2173.50	PASS	AB=0.972;AC=14;AF=0.250;AN=56;BaseQRankSum=8.116;DP=550;FS=8.923;HRun=0;HaplotypeScore=84.1783;InbreedingCoeff=0.7292;MQ=57.24;MQ0=8;MQRankSum=0.494;QD=13.84;ReadPosRankSum=1.615;VQSLOD=2.7171;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,25:38:44.14:688,44,0	1/1:2,3:5:9:108,9,0	0/0:36,0:19:23.47:0,23,292	0/0:33,0:13:20.96:0,21,202	0/0:10,0:10:20.99:0,21,352	0/0:23,0:23:57.14:0,57,1017	0/0:15,0:15:33.10:0,33,638	0/1:35,0:33:8.89:9,0,675	0/0:23,0:23:51.14:0,51,938	1/1:5,20:25:60.14:810,60,0	1/1:4,3:6:6.02:80,6,0	0/1:16,1:17:10.26:10,0,544	0/0:22,0:22:63.17:0,63,1120	0/0:13,0:13:33.11:0,33,660	0/0:19,0:19:45.14:0,45,815	0/0:23,1:24:10.82:0,11,942	0/0:26,0:26:9.76:0,10,790	1/1:1,12:13:21.07:303,21,0	0/0:15,0:14:2.07:0,2,314	0/0:7,0:7:18.06:0,18,346	0/0:29,0:29:72.22:0,72,1352	0/0:9,0:9:24.06:0,24,423	0/0:10,0:10:27.08:0,27,483	0/0:19,0:19:32.99:0,33,746	1/1:6,11:17:24.08:347,24,0	0/0:27,0:27:8.03:0,8,880	0/0:22,0:22:57.18:0,57,1106	0/0:11,0:11:18.02:0,18,290
chr10	71222812	.	C	CACACAT	2080.79	PASS	AB=0.641;AC=10;AF=0.179;AN=56;BaseQRankSum=-2.180;DP=738;FS=34.753;HRun=0;HaplotypeScore=165.7651;InbreedingCoeff=0.8379;MQ=57.70;MQ0=32;MQRankSum=-7.679;QD=17.06;ReadPosRankSum=-1.129;VQSLOD=1.1159;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,23:38:8.55:300,9,0	1/1:2,4:6:3.01:98,3,0	0/0:66,0:18:39.17:0,39,624	0/0:93,0:36:62.37:0,62,1212	0/0:15,0:15:33.11:0,33,670	0/0:28,0:27:66.19:0,66,1300	0/0:27,0:26:54.17:0,54,1099	0/0:30,0:28:69.19:0,69,1285	0/0:28,0:28:72.22:0,72,1462	1/1:17,12:27:40.24:1551,40,0	0/1:9,7:16:0.14:0,0,0	0/0:20,0:19:33.11:0,33,684	0/0:15,0:15:23.82:0,24,515	0/0:32,0:32:75.21:0,75,1448	0/0:20,0:20:36.12:0,36,770	0/0:18,0:18:33.09:0,33,663	0/0:29,0:29:53.11:0,53,955	1/1:12,2:14:13.23:273,13,0	0/0:18,0:15:21.07:0,21,450	0/0:16,0:16:36.11:0,36,714	0/0:43,0:40:84.27:0,84,1723	0/0:17,0:16:24.01:0,24,493	0/0:11,0:9:15.05:0,15,322	0/0:14,0:14:12.04:0,12,256	0/1:5,10:16:0.02:0,0,0	0/0:26,0:24:51.13:0,51,975	0/0:24,0:23:57.17:0,57,1175	0/0:25,0:24:55.66:0,56,1035
chr10	71223861	.	T	TAGA	7495.27	PASS	AB=0.933;AC=13;AF=0.232;AN=56;BaseQRankSum=-5.181;DP=773;FS=2.610;HRun=0;HaplotypeScore=112.0148;InbreedingCoeff=0.8996;MQ=84.38;MQ0=0;MQRankSum=-1.433;QD=43.33;ReadPosRankSum=1.555;VQSLOD=6.1735;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,38:41:96.29:2072,96,0	1/1:2,10:12:27.05:550,27,0	0/0:20,0:20:41.15:0,41,591	0/0:28,0:28:64.90:0,65,971	0/0:31,0:30:81.23:0,81,1270	0/0:22,0:22:63.20:0,63,983	0/0:28,0:28:78.17:0,78,1141	0/0:36,0:36:96.30:0,96,1475	0/0:39,0:38:99:0,114,1779	1/1:3,22:26:69.22:1444,69,0	1/1:3,16:20:45.11:888,45,0	0/0:33,0:33:96.30:0,96,1492	0/0:19,0:19:57.19:0,57,915	0/0:37,0:37:99:0,111,1729	0/0:30,0:30:87.30:0,87,1392	0/0:17,0:17:42.13:0,42,651	0/0:36,0:36:99:0,102,1638	1/1:5,23:28:63.22:1391,63,0	0/0:21,0:21:45.15:0,45,720	0/0:30,0:30:78.25:0,78,1213	0/0:57,0:57:99:0,156,2434	0/0:21,0:21:54.18:0,54,860	0/0:21,0:21:57.19:0,57,913	0/0:26,0:26:72.18:0,72,1103	1/1:1,17:18:51.17:1097,51,0	0/1:26,2:28:54.07:54,0,1077	0/0:34,0:33:99:0,99,1583	0/0:14,0:14:39.13:0,39,625
chr10	71224409	.	TG	T	2944.31	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.906;DP=588;FS=0.812;HRun=8;HaplotypeScore=58.8442;InbreedingCoeff=0.9982;MQ=75.52;MQ0=0;MQRankSum=-2.009;QD=22.82;ReadPosRankSum=1.901;VQSLOD=4.1803;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,42:45:99:1147,120,0	1/1:0,6:6:18.03:174,18,0	0/0:19,0:19:42.04:0,42,445	0/0:21,0:21:42.04:0,42,448	0/0:23,0:23:60.15:0,60,690	0/0:24,0:24:72.22:0,72,870	0/0:16,0:16:45.14:0,45,543	0/0:20,0:20:42.12:0,42,494	0/0:17,0:17:48.15:0,48,580	1/1:2,20:22:60.09:575,60,0	1/1:3,18:21:48.03:454,48,0	0/0:14,0:14:36.11:0,36,435	0/0:23,0:23:66.17:0,66,774	0/0:22,0:22:66.20:0,66,797	0/0:21,0:21:57.11:0,57,639	0/0:16,0:16:42.13:0,42,507	0/0:19,0:19:54.14:0,54,630	1/1:4,14:18:33.02:319,33,0	0/0:27,0:27:75.21:0,75,885	0/0:23,0:23:57.17:0,57,688	0/0:28,0:28:78.21:0,78,928	0/0:26,0:26:69.21:0,69,833	0/0:17,0:17:51.12:0,51,584	0/0:19,0:19:51.16:0,51,616	1/1:0,17:17:48.08:464,48,0	0/0:22,0:22:63.16:0,63,746	0/0:28,0:28:78.23:0,78,924	0/0:14,0:14:42.13:0,42,507
chr10	71225797	.	CT	C	758.35	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=5.238;DP=420;FS=8.364;HRun=10;HaplotypeScore=52.4820;InbreedingCoeff=0.7481;MQ=61.71;MQ0=23;MQRankSum=-0.188;QD=12.64;ReadPosRankSum=0.442;VQSLOD=2.5714;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:6:0:0,0,0	0/0:2,0:2:0:0,0,0	0/0:15,0:9:5.49:0,5,35	0/0:19,0:9:1.09:0,1,33	0/0:29,0:27:60.09:0,60,637	0/0:20,0:18:45.08:0,45,478	0/0:6,0:6:18.04:0,18,191	0/0:20,0:19:47.31:0,47,491	0/0:11,0:11:27.07:0,27,298	0/0:13,0:10:2.68:0,3,11	1/1:10,0:12:1.76:5,2,0	0/0:17,0:16:36.09:0,36,390	1/1:2,13:15:35.99:312,36,0	0/0:8,0:7:12.03:0,12,132	0/0:18,0:15:35.93:0,36,381	0/0:15,0:15:36.06:0,36,378	0/0:23,0:23:54.13:0,54,588	./.	0/0:12,0:11:21.53:0,22,211	0/0:23,0:22:56.64:0,57,606	0/0:9,0:8:15.03:0,15,158	0/0:13,0:11:27.06:0,27,290	1/1:6,15:19:44.19:372,44,0	1/1:3,9:12:23.98:208,24,0	./.	0/0:17,0:15:38.96:0,39,404	0/0:26,0:22:45.12:0,45,491	0/0:29,0:29:82.46:0,82,889
chr10	71225799	.	T	TC	334.60	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=6.202;DP=423;FS=52.311;HRun=0;HaplotypeScore=55.3247;InbreedingCoeff=0.9044;MQ=57.91;MQ0=24;MQRankSum=-7.124;QD=9.56;ReadPosRankSum=0.292;VQSLOD=1.6482;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:5:11.77:72,12,0	1/1:3,0:2:5.88:36,6,0	0/0:13,0:7:11.42:0,11,88	0/0:17,0:8:5.25:0,5,64	0/0:29,0:27:72.09:0,72,885	0/0:20,0:18:54.11:0,54,670	0/0:6,0:6:18.05:0,18,235	0/0:20,0:19:50.99:0,51,641	0/0:11,0:11:30.09:0,30,399	1/1:12,1:10:29.76:224,30,0	1/1:11,1:12:23.50:150,23,0	0/0:17,0:16:33.11:0,33,458	0/0:14,0:14:37.98:0,38,251	0/0:8,0:7:12.51:0,13,168	0/0:21,0:18:39.10:0,39,495	0/0:15,0:15:45.08:0,45,545	0/0:25,0:25:66.16:0,66,833	./.	0/0:14,0:13:33.04:0,33,384	0/0:23,0:22:60.16:0,60,798	0/0:10,0:9:21.03:0,21,241	0/0:14,0:12:33.02:0,33,397	0/0:21,0:19:56.10:0,56,383	0/0:12,0:12:28.51:0,29,180	./.	0/0:17,0:15:24.54:0,25,496	0/0:25,0:21:57.11:0,57,718	0/0:30,0:29:84.27:0,84,1139
chr10	71230914	.	A	AG	987.71	PASS	AB=0.939;AC=13;AF=0.260;AN=50;BaseQRankSum=2.772;DP=536;FS=6.793;HRun=3;HaplotypeScore=48.1783;InbreedingCoeff=0.7764;MQ=51.41;MQ0=32;MQRankSum=-4.335;QD=13.35;ReadPosRankSum=-0.882;VQSLOD=1.6253;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:4:9.03:144,9,0	./.	0/0:28,0:4:8.22:0,8,70	0/1:29,0:8:47.49:47,0,56	0/0:27,0:26:36.12:0,36,489	0/0:31,1:32:19.68:0,20,826	0/0:18,1:17:30.10:0,30,419	0/0:28,1:24:60.20:0,60,837	0/0:18,0:18:21.07:0,21,294	1/1:0,5:3:6.02:96,6,0	./.	0/0:21,0:21:39.13:0,39,536	1/1:0,17:14:36.12:563,36,0	0/0:21,1:21:39.10:0,39,507	0/0:19,0:19:27.09:0,27,375	0/0:27,0:26:54.17:0,54,730	0/0:21,0:21:42.14:0,42,587	./.	0/0:27,0:24:69.23:0,69,964	0/0:34,4:34:69.23:0,69,946	0/0:29,0:29:69.23:0,69,964	0/0:15,0:15:24.08:0,24,327	1/1:0,5:5:6:61,6,0	1/1:1,4:4:12.04:191,12,0	1/1:1,2:2:3.01:48,3,0	0/0:30,0:30:90.30:0,90,1257	0/0:39,0:39:84.28:0,84,1161	0/0:14,1:13:21.07:0,21,294
chr10	71232227	.	C	CAG	1891.02	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.737;DP=544;FS=16.915;HRun=0;HaplotypeScore=72.9515;InbreedingCoeff=0.9602;MQ=54.33;MQ0=9;MQRankSum=-8.815;QD=24.56;ReadPosRankSum=-0.802;VQSLOD=2.5489;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,16:22:30.10:531,30,0	1/1:1,5:6:12.04:213,12,0	0/0:16,0:14:39.13:0,39,535	0/0:18,0:11:32.32:0,32,404	0/0:14,0:14:42.14:0,42,588	0/0:24,0:22:60.20:0,60,840	0/0:23,0:22:57.19:0,57,798	0/0:16,0:15:36.12:0,36,504	0/0:16,0:15:38.96:0,39,529	1/1:2,10:11:21.07:373,21,0	1/1:2,9:12:12.04:212,12,0	0/0:10,0:9:27.08:0,27,361	0/0:18,0:18:48.16:0,48,672	0/0:23,0:22:57.19:0,57,797	0/0:15,0:14:33.11:0,33,462	0/0:11,0:10:30.10:0,30,420	0/0:29,0:29:72.22:0,72,985	1/1:0,9:8:18.06:320,18,0	0/0:21,0:21:14.29:0,14,636	0/0:18,0:17:48.16:0,48,672	0/0:69,0:68:99:0,141,2418	0/0:21,0:21:57.18:0,57,778	0/0:7,0:6:15.05:0,15,207	0/0:41,0:40:96.30:0,96,1325	1/1:3,12:14:24.08:425,24,0	0/0:23,1:23:7.23:0,7,746	0/0:20,0:20:54.18:0,54,755	0/0:13,0:13:27.09:0,27,378
chr10	71233357	.	GA	G	2825.21	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=10.549;DP=629;FS=4.904;HRun=3;HaplotypeScore=58.6887;InbreedingCoeff=0.9630;MQ=54.85;MQ0=17;MQRankSum=-1.278;QD=25.68;ReadPosRankSum=-0.173;VQSLOD=2.5017;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:60.19:744,60,0	1/1:0,12:12:27.08:334,27,0	./.	0/0:12,0:2:3:0,3,26	0/0:41,0:41:99:0,105,1494	0/0:28,0:27:75.24:0,75,1058	0/0:6,0:6:18:0,18,218	0/0:33,0:29:84.25:0,84,1170	0/0:22,0:21:60.20:0,60,863	1/1:1,20:20:54.17:669,54,0	1/1:1,18:15:29.91:371,30,0	0/0:21,0:17:51.17:0,51,734	0/0:23,0:22:63.21:0,63,906	0/0:17,0:17:51.16:0,51,717	0/0:20,0:20:45.14:0,45,630	0/0:15,0:15:45.15:0,45,648	0/0:15,0:15:45.11:0,45,625	1/1:1,14:14:36.11:446,36,0	0/0:28,0:25:75.24:0,75,1061	0/0:36,0:36:99:0,102,1455	0/0:17,0:17:45.13:0,45,628	0/0:25,0:25:63.20:0,63,888	0/0:27,0:27:63.21:0,63,906	0/0:23,0:22:57.14:0,57,778	1/1:0,17:15:36.11:445,36,0	0/0:25,2:26:41.06:0,41,1043	0/0:45,0:45:99:0,117,1682	0/0:27,0:27:81.26:0,81,1147
chr10	71233526	.	A	ACAAACC	5917.92	PASS	AB=0.600;AC=11;AF=0.212;AN=52;BaseQRankSum=11.603;DP=634;FS=5.772;HRun=0;HaplotypeScore=110.6804;InbreedingCoeff=0.8779;MQ=39.24;MQ0=73;MQRankSum=-9.043;QD=73.97;ReadPosRankSum=-0.005;VQSLOD=5.4317;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,7:11:21.07:622,21,0	1/1:0,8:8:24.08:834,24,0	./.	./.	0/0:36,0:34:78.27:0,78,1997	0/0:26,0:23:39.13:0,39,994	0/0:16,0:11:17.64:0,18,422	0/0:39,0:31:93.29:0,93,2217	0/0:24,0:23:33.11:0,33,841	1/1:0,17:14:42.14:1412,42,0	1/1:1,11:13:36.12:792,36,0	0/0:36,0:30:42.12:0,42,947	0/0:17,0:14:21.07:0,21,538	0/0:32,0:29:45.12:0,45,964	0/0:24,0:23:24.55:0,25,611	0/0:21,0:19:30.10:0,30,731	0/0:17,0:13:27.05:0,27,629	0/1:3,6:6:52.72:402,0,53	0/0:16,0:8:24.08:0,24,610	0/0:24,0:24:72.23:0,72,1761	0/0:33,0:28:42.05:0,42,951	0/0:24,0:19:27.08:0,27,640	0/0:33,0:30:48.16:0,48,1205	0/0:21,0:17:21.07:0,21,538	1/1:0,17:18:54.19:1855,54,0	0/0:21,1:20:57.17:0,57,1406	0/0:36,0:31:54.66:0,55,1224	0/0:18,0:16:24.08:0,24,615
chr10	71233530	.	C	CA	2665.01	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=12.375;DP=654;FS=9.892;HRun=0;HaplotypeScore=101.4487;InbreedingCoeff=0.9383;MQ=38.55;MQ0=72;MQRankSum=-9.153;QD=25.63;ReadPosRankSum=2.279;VQSLOD=3.9003;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,7:15:1.62:250,2,0	1/1:3,8:11:33.11:475,33,0	./.	./.	0/0:39,0:37:81.24:0,81,1094	0/0:25,0:22:36.12:0,36,503	0/0:16,0:11:14.79:0,15,209	0/0:37,0:28:84.28:0,84,1174	0/0:25,0:23:33.11:0,33,461	1/1:7,17:17:43.09:707,43,0	1/1:2,13:15:15.05:205,15,0	0/0:34,0:28:33.11:0,33,461	0/0:17,0:14:21.07:0,21,293	0/0:30,0:27:36.11:0,36,487	0/0:25,0:24:21.05:0,21,276	0/0:21,0:19:27.07:0,27,377	0/0:17,0:13:24.08:0,24,335	1/1:4,6:7:21.07:314,21,0	0/0:15,0:7:21.07:0,21,294	0/0:24,0:24:72.23:0,72,988	0/0:33,0:28:39.09:0,39,522	0/0:24,0:19:27.56:0,28,378	0/0:33,0:30:45.13:0,45,611	0/0:20,0:17:21.07:0,21,294	1/1:6,17:23:54.92:889,55,0	0/0:23,1:21:14.34:0,14,730	0/0:35,0:30:48.16:0,48,671	0/0:18,0:16:24.08:0,24,336
chr10	71233947	.	GA	G	886.81	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=2.766;DP=589;FS=4.571;HRun=8;HaplotypeScore=89.0207;InbreedingCoeff=0.8207;MQ=75.60;MQ0=0;MQRankSum=-1.349;QD=13.04;ReadPosRankSum=0.004;VQSLOD=3.3265;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:47.46:0,47,318	0/0:6,0:6:13.81:0,14,61	0/0:27,0:19:35.04:0,35,351	0/0:17,0:16:23.58:0,24,185	0/0:30,0:30:87.21:0,87,1003	0/0:23,0:22:63.13:0,63,742	0/0:23,1:24:31.21:0,31,658	0/0:27,0:28:74.97:0,75,823	0/0:17,0:15:36.08:0,36,410	0/0:28,0:28:19.88:0,20,232	0/0:26,0:26:46.10:0,46,304	0/0:22,0:22:34.20:0,34,648	1/1:2,10:12:30.05:290,30,0	0/0:18,0:18:48.14:0,48,569	0/0:20,0:20:54.17:0,54,652	0/0:14,0:14:36.10:0,36,424	0/0:24,0:24:69.17:0,69,807	0/0:21,0:21:29.06:0,29,209	0/0:14,0:14:33.08:0,33,385	0/0:31,0:31:87.23:0,87,1026	0/0:13,0:13:30.09:0,30,359	0/0:24,0:24:51.05:0,51,615	1/1:3,19:21:42.07:406,42,0	1/1:1,11:12:33.05:319,33,0	0/1:22,0:22:21.61:22,0,147	0/0:26,0:26:74.91:0,75,841	0/0:38,0:37:99:0,99,1144	0/0:5,0:5:12.04:0,12,145
chr10	71234124	.	T	TAAAAAC	1501.81	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=1.660;DP=601;FS=12.380;HRun=0;HaplotypeScore=119.5726;InbreedingCoeff=0.9163;MQ=62.60;MQ0=3;MQRankSum=-6.613;QD=25.89;ReadPosRankSum=-3.072;VQSLOD=1.9775;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:69.24:0,69,1352	0/0:13,0:13:21.07:0,21,419	./.	./.	0/0:24,0:24:51.16:0,51,982	0/0:22,0:22:31.71:0,32,700	0/0:15,0:15:21.07:0,21,419	0/0:28,0:28:11.51:0,12,159	0/0:15,0:15:27.09:0,27,503	0/0:31,0:30:36.12:0,36,698	0/0:38,0:38:57.19:0,57,1113	0/0:26,0:26:48.15:0,48,888	1/1:10,5:15:21.07:625,21,0	0/0:17,0:17:33.10:0,33,595	0/0:15,0:15:27.09:0,27,538	0/0:10,0:10:15.05:0,15,299	0/0:21,0:21:39.13:0,39,757	0/0:21,0:21:15.05:0,15,299	0/0:14,0:12:12.04:0,12,239	0/0:32,0:32:51.12:0,51,928	0/0:13,0:13:24.08:0,24,479	0/0:20,0:20:27.04:0,27,464	1/1:15,10:26:27.09:856,27,0	1/1:16,1:17:5.73:153,6,0	0/0:22,0:22:21.07:0,21,419	0/0:23,0:24:42.14:0,42,803	0/0:36,0:35:48.16:0,48,908	0/0:13,0:13:24.08:0,24,479
chr10	71237319	.	AGGAGAG	A	312.01	PASS	AB=0.992;AC=10;AF=0.333;AN=30;BaseQRankSum=1.775;DP=461;FS=0.000;HRun=0;HaplotypeScore=96.3948;InbreedingCoeff=0.4059;MQ=68.47;MQ0=29;MQRankSum=-2.679;QD=2.81;ReadPosRankSum=1.452;VQSLOD=1.2761;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:5,3:7:9.03:179,9,0	0/1:59,0:24:0.34:0,0,0	./.	./.	0/0:17,0:16:5.85:0,6,86	./.	./.	./.	./.	1/1:10,2:12:6.02:120,6,0	0/0:8,0:9:2.84:0,3,14	1/1:11,0:14:3.01:42,3,0	1/1:7,0:9:3.01:42,3,0	0/0:10,0:10:5.72:0,6,28	0/1:8,0:8:3.83:34,0,4	./.	0/0:9,0:11:3.01:0,3,33	0/0:14,0:13:6.01:0,6,113	0/0:6,0:6:3.01:0,3,67	0/0:30,0:30:6.02:0,6,185	./.	./.	0/0:14,0:13:0:0,0,0	./.	./.	./.	0/0:8,0:8:9.03:0,9,235
chr10	71238929	.	G	GT	280.25	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-0.142;DP=335;FS=3.462;HRun=11;HaplotypeScore=37.3154;InbreedingCoeff=0.6484;MQ=76.18;MQ0=10;MQRankSum=-0.279;QD=10.38;ReadPosRankSum=-0.057;VQSLOD=1.9427;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:11.73:0,12,72	0/0:3,0:3:4.81:0,5,44	0/0:23,0:14:0.14:0,0,52	0/0:7,0:5:2.59:0,3,10	0/0:12,0:13:31.27:0,31,218	0/0:5,0:4:8.96:0,9,70	0/0:6,0:6:11.95:0,12,93	0/0:26,0:24:49.65:0,50,368	0/0:11,0:11:23.90:0,24,186	0/0:13,0:14:31.92:0,32,237	0/0:8,0:8:17.92:0,18,137	0/0:15,0:15:30.83:0,31,271	1/1:7,6:13:3.82:220,4,0	0/0:15,0:15:26.87:0,27,209	0/0:7,0:7:8.95:0,9,70	0/0:9,0:10:16.98:0,17,122	0/0:14,0:12:29.88:0,30,232	0/0:17,0:15:30.99:0,31,217	0/0:14,0:14:27.77:0,28,210	0/0:17,0:16:37.13:0,37,267	0/0:14,0:14:26.89:0,27,208	0/0:6,0:6:5.96:0,6,44	1/1:2,2:5:8.85:75,9,0	1/1:4,4:9:11.86:106,12,0	0/0:6,0:6:8.95:0,9,68	0/0:9,0:9:20.92:0,21,163	0/0:25,0:26:58.76:0,59,446	0/0:9,0:9:23.91:0,24,186
chr10	71239516	.	GC	G	562.29	PASS	AB=0.763;AC=2;AF=0.036;AN=56;BaseQRankSum=5.676;DP=714;FS=5.600;HRun=1;HaplotypeScore=77.6739;InbreedingCoeff=-0.0371;MQ=58.00;MQ0=8;MQRankSum=-7.095;QD=7.30;ReadPosRankSum=-0.928;VQSLOD=0.3407;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:35,16:50:99:439,0,1030	0/0:12,0:12:36.08:0,36,527	0/0:21,0:10:29.89:0,30,428	0/0:17,0:16:47.37:0,47,723	0/0:20,0:20:60.17:0,60,910	0/0:18,0:18:54.16:0,54,817	0/0:18,0:18:54.18:0,54,863	0/0:25,0:24:72.24:0,72,1128	0/0:35,0:34:99:0,102,1630	0/0:19,0:19:51.17:0,51,796	0/0:14,0:13:36.56:0,37,529	0/0:37,0:37:99:0,108,1723	0/0:30,0:30:87.30:0,87,1386	0/0:28,0:28:81.26:0,81,1272	0/0:41,0:41:99:0,123,1942	0/0:36,0:36:99:0,108,1698	0/0:39,0:39:99:0,117,1845	0/1:18,8:26:99:213,0,743	0/0:18,0:18:51.13:0,51,765	0/0:20,0:19:57.19:0,57,911	0/0:55,0:55:99:0,166,2555	0/0:21,0:21:63.20:0,63,985	0/0:13,0:13:39.10:0,39,572	0/0:27,0:27:81.26:0,81,1271	0/0:13,0:13:39.11:0,39,578	0/0:18,0:18:51.17:0,51,816	0/0:29,0:29:87.30:0,87,1380	0/0:13,0:13:39.13:0,39,623
chr10	71240767	.	G	GA	994.81	PASS	AB=0.861;AC=7;AF=0.125;AN=56;BaseQRankSum=-4.331;DP=615;FS=3.387;HRun=10;HaplotypeScore=64.0778;InbreedingCoeff=0.5000;MQ=58.51;MQ0=7;MQRankSum=-0.211;QD=8.36;ReadPosRankSum=-0.319;VQSLOD=1.9494;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:30:54.10:568,54,0	0/0:7,0:7:8.99:0,9,74	0/0:11,0:5:11.02:0,11,79	0/0:8,0:4:4.55:0,5,28	0/0:21,1:23:17.97:0,18,343	0/0:13,0:13:26.96:0,27,221	0/0:36,0:33:52.33:0,52,566	0/1:28,4:32:24.21:24,0,434	0/0:19,0:19:20.75:0,21,321	0/0:27,0:26:60.96:0,61,495	0/1:10,4:14:17.71:18,0,188	0/0:33,4:37:39.68:0,40,533	0/0:22,0:23:61.89:0,62,487	0/0:27,0:26:32.77:0,33,418	0/0:24,0:23:33.18:0,33,463	0/0:20,0:20:29.28:0,29,372	0/0:23,0:22:62.53:0,63,503	1/1:3,17:20:29.50:519,29,0	0/0:23,1:23:12.88:0,13,305	0/0:26,0:26:40.36:0,40,303	0/0:28,0:27:59.85:0,60,484	0/0:23,0:23:44.87:0,45,367	0/0:18,0:18:16.90:0,17,293	0/1:20,2:22:1.32:1,0,386	0/0:16,0:15:28.95:0,29,224	0/0:19,0:19:37.95:0,38,301	0/0:25,0:23:56.92:0,57,468	0/0:16,0:16:35.95:0,36,295
chr10	71245102	.	C	CT	918.83	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-2.667;DP=619;FS=3.878;HRun=10;HaplotypeScore=67.1392;InbreedingCoeff=0.8144;MQ=67.68;MQ0=3;MQRankSum=-0.561;QD=10.81;ReadPosRankSum=0.401;VQSLOD=2.9847;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:53.82:0,54,429	0/0:4,0:5:8.03:0,8,55	0/0:24,0:16:29.74:0,30,224	0/1:30,0:19:22.65:23,0,103	0/0:31,0:32:61.61:0,62,479	0/0:22,0:22:56.87:0,57,458	0/0:23,0:24:64.92:0,65,517	0/0:27,0:27:56.91:0,57,468	0/0:13,0:13:31.03:0,31,261	0/0:29,0:29:74.87:0,75,613	0/0:25,0:25:47.83:0,48,537	0/0:28,0:28:74.91:0,75,616	1/1:3,16:19:36.56:385,37,0	0/0:14,0:14:35.95:0,36,296	0/0:15,0:15:44.95:0,45,369	0/0:18,0:18:41.94:0,42,345	0/0:28,0:30:72.97:0,73,578	0/0:15,0:15:38.88:0,39,312	0/0:20,0:20:44.93:0,45,369	0/0:29,0:29:74.87:0,75,612	0/0:8,0:8:20.97:0,21,172	0/0:24,0:24:32.40:0,32,410	1/1:4,22:26:23.23:435,23,0	1/1:1,8:9:21.05:224,21,0	0/0:25,0:26:73.86:0,74,586	0/0:35,1:36:66.86:0,67,751	0/0:35,0:36:82.83:0,83,662	0/0:14,0:14:38.95:0,39,320
chr10	71245841	.	A	AG	828.93	PASS	AB=0.719;AC=9;AF=0.161;AN=56;BaseQRankSum=0.002;DP=572;FS=4.763;HRun=9;HaplotypeScore=80.5577;InbreedingCoeff=0.3530;MQ=77.00;MQ0=0;MQRankSum=1.431;QD=7.21;ReadPosRankSum=-0.139;VQSLOD=1.4980;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:8,20:28:13.01:326,0,13	0/1:3,2:5:19.97:27,0,20	0/1:18,0:17:17.48:17,0,169	0/0:25,0:23:38.37:0,38,311	0/0:23,0:23:47.96:0,48,416	0/0:15,0:15:29.98:0,30,260	0/0:25,0:25:36.94:0,37,418	0/0:22,0:22:29.96:0,30,260	0/0:19,0:19:41.94:0,42,358	0/1:9,9:18:18.89:240,0,19	1/1:5,9:14:9.02:100,9,0	0/0:26,0:26:59.89:0,60,516	0/0:26,0:26:50.97:0,51,442	0/0:17,0:17:35.97:0,36,308	0/0:19,0:19:50.99:0,51,441	0/0:17,0:17:35.97:0,36,312	0/0:32,0:32:89.97:0,90,781	1/1:3,0:19:25.57:128,26,0	0/0:18,0:18:25.44:0,25,368	0/0:20,0:20:23.54:0,24,207	0/0:30,0:30:65.92:0,66,572	0/0:26,0:26:50.73:0,51,433	0/0:16,0:16:38.99:0,39,338	0/0:16,0:16:38.99:0,39,338	0/1:5,7:12:8.13:139,0,8	0/0:25,0:26:21.84:0,22,345	0/0:27,0:27:68.95:0,69,594	0/0:11,0:11:14.93:0,15,126
chr10	71252028	.	TC	T	292.65	PASS	AC=6;AF=0.158;AN=38;BaseQRankSum=4.392;DP=682;FS=0.000;HRun=3;HaplotypeScore=22.5138;InbreedingCoeff=0.6894;MQ=13.23;MQ0=456;MQRankSum=-1.533;QD=4.24;ReadPosRankSum=2.113;VQSLOD=0.3476;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/0:39,0:10:27.09:0,27,388	0/0:24,0:12:27.09:0,27,379	0/0:27,0:6:12:0,12,149	./.	0/0:23,0:13:33.02:0,33,420	1/1:15,8:9:21.06:260,21,0	./.	0/0:25,0:10:21.07:0,21,295	1/1:13,14:13:9.03:111,9,0	0/0:32,0:6:12.04:0,12,164	0/0:24,0:12:33.11:0,33,466	0/0:20,0:6:12.04:0,12,173	0/0:43,0:2:3.01:0,3,43	0/0:29,0:2:6.02:0,6,77	0/0:32,0:8:21.07:0,21,302	./.	0/0:25,0:1:3.01:0,3,33	0/0:35,0:8:18.06:0,18,259	1/1:18,1:1:3.01:37,3,0	./.	./.	0/0:31,0:7:21.07:0,21,301	0/0:36,0:15:30.10:0,30,413	0/0:19,0:2:5.99:0,6,64
chr10	71253233	.	GA	G	1335.99	PASS	AC=14;AF=0.389;AN=36;BaseQRankSum=4.120;DP=649;FS=0.000;HRun=1;HaplotypeScore=25.9864;InbreedingCoeff=0.7153;MQ=12.04;MQ0=526;MQRankSum=0.403;QD=11.52;ReadPosRankSum=1.328;VQSLOD=1.7008;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,1:1:3.01:42,3,0	1/1:0,5:5:12.04:167,12,0	./.	./.	0/0:31,0:15:27.09:0,27,427	0/0:28,0:4:6.02:0,6,95	./.	./.	0/0:31,0:2:3.01:0,3,48	1/1:11,10:8:18.06:243,18,0	1/1:0,15:13:36.12:498,36,0	0/0:27,0:2:3.01:0,3,48	1/1:14,2:1:3.01:42,3,0	0/0:35,0:2:3.01:0,3,48	./.	0/0:29,0:5:14.99:0,15,164	./.	./.	./.	0/0:28,0:12:30.10:0,30,454	./.	0/0:38,0:14:33.11:0,33,511	1/1:4,7:6:12.04:162,12,0	./.	1/1:8,9:9:24.08:328,24,0	0/0:24,0:3:9.03:0,9,143	0/0:51,0:11:23.95:0,24,354	0/0:14,0:1:2.96:0,3,19
chr10	71256017	.	C	CT	510.13	PASS	AB=0.862;AC=3;AF=0.054;AN=56;BaseQRankSum=7.488;DP=637;FS=14.560;HRun=2;HaplotypeScore=61.9256;InbreedingCoeff=0.6398;MQ=59.42;MQ0=5;MQRankSum=-4.148;QD=9.63;ReadPosRankSum=-1.842;VQSLOD=-0.3201;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,1:25:60.02:578,60,0	0/0:8,0:8:21.07:0,21,260	0/0:22,0:14:39.06:0,39,436	0/0:28,0:20:17.56:0,18,490	0/0:22,0:22:57.18:0,57,700	0/0:23,0:23:63.20:0,63,780	0/0:16,0:15:42.13:0,42,519	0/0:37,0:33:96.30:0,96,1190	0/0:16,0:16:48.15:0,48,595	0/0:31,0:31:87.27:0,87,1079	0/0:24,0:24:57.16:0,57,688	0/0:29,0:29:72.06:0,72,892	0/0:20,0:20:57.18:0,57,706	0/0:18,0:18:54.16:0,54,657	0/0:23,0:23:66.21:0,66,818	0/0:12,0:12:33.10:0,33,409	0/0:25,1:26:54.17:0,54,669	0/1:21,4:25:38.12:38,0,473	0/0:25,0:22:63.20:0,63,781	0/0:23,0:23:60.19:0,60,743	0/0:19,0:19:48.12:0,48,580	0/0:21,0:21:45.14:0,45,558	0/0:24,0:24:66.21:0,66,817	0/0:24,0:24:37.20:0,37,683	0/0:17,0:17:45.13:0,45,546	0/0:26,0:26:75.22:0,75,916	0/0:43,0:41:99:0,129,1597	0/0:7,0:7:21.07:0,21,260
chr10	71256019	.	T	TC	826.59	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=4.557;DP=641;FS=14.552;HRun=0;HaplotypeScore=60.2566;InbreedingCoeff=0.7389;MQ=58.28;MQ0=5;MQRankSum=-4.597;QD=15.90;ReadPosRankSum=-1.907;VQSLOD=3.8530;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:25:60.19:921,60,0	0/0:8,0:8:21.07:0,21,293	0/0:18,0:13:39.07:0,39,495	0/0:26,0:20:17.68:0,18,566	0/0:22,0:22:57.19:0,57,796	0/0:23,0:23:63.21:0,63,880	0/0:17,0:15:42.14:0,42,586	0/0:42,0:35:99:0,105,1414	0/0:18,0:18:48.16:0,48,671	0/0:29,0:29:87.29:0,87,1216	0/0:23,0:23:57.19:0,57,795	0/0:31,0:30:72.23:0,72,1007	0/0:19,0:19:57.19:0,57,796	0/0:18,0:18:54.18:0,54,754	0/0:23,0:23:66.22:0,66,923	0/0:12,0:12:33.11:0,33,462	0/0:26,0:26:57.12:0,57,772	0/1:24,0:24:1.27:1,0,539	0/0:24,0:21:63.21:0,63,880	0/0:24,0:23:60.20:0,60,838	0/0:19,0:19:51.12:0,51,673	0/0:21,0:21:45.15:0,45,629	0/0:26,0:26:66.22:0,66,922	0/0:24,1:25:12.25:0,12,749	0/0:17,0:17:45.15:0,45,629	0/0:27,0:27:78.24:0,78,1057	0/0:43,0:41:99:0,129,1804	0/0:7,0:7:21.07:0,21,293
chr10	71257778	.	CT	C	1227.19	PASS	AB=0.914;AC=15;AF=0.268;AN=56;BaseQRankSum=7.530;DP=684;FS=0.000;HRun=13;HaplotypeScore=76.8476;InbreedingCoeff=0.4704;MQ=68.73;MQ0=0;MQRankSum=0.332;QD=5.27;ReadPosRankSum=2.864;VQSLOD=2.1821;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,1:38:84.03:0,84,782	1/1:2,11:13:29.82:218,30,0	0/1:20,2:18:11.78:12,0,173	0/0:13,1:13:4.75:0,5,159	0/0:25,0:25:60.13:0,60,553	0/0:17,1:19:20:0,20,342	0/0:24,2:26:4.24:0,4,355	0/0:37,1:39:48.11:0,48,612	0/0:31,0:31:76.33:0,76,725	1/1:10,24:35:51.15:490,51,0	1/1:6,15:22:3.97:265,4,0	0/1:31,2:33:10.92:11,0,515	0/0:25,2:27:26.12:0,26,395	0/0:17,1:18:14.03:0,14,264	0/0:17,0:17:33.04:0,33,313	0/0:16,0:16:39.04:0,39,370	0/0:29,1:30:49.58:0,50,606	1/1:4,6:10:17.86:131,18,0	0/1:23,3:27:8.77:9,0,388	0/0:25,0:26:54.06:0,54,510	0/1:23,3:26:14.67:15,0,350	0/0:21,3:25:10.32:0,10,373	0/1:19,2:21:18.80:19,0,296	0/0:21,1:22:12.48:0,12,397	1/1:5,19:24:9.57:233,10,0	0/0:31,1:35:42.88:0,43,557	0/0:32,1:33:48.88:0,49,580	0/0:8,0:10:26.69:0,27,221
chr10	71262424	.	C	CTCTG	594.73	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.346;DP=640;FS=0.000;HRun=0;HaplotypeScore=115.9489;InbreedingCoeff=0.9391;MQ=66.58;MQ0=3;MQRankSum=-1.836;QD=24.78;ReadPosRankSum=2.683;VQSLOD=3.1942;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:48.09:0,48,779	0/0:17,0:17:45.11:0,45,716	0/0:37,0:29:63.70:0,64,904	0/0:44,0:33:47.78:0,48,760	0/0:21,0:21:57.14:0,57,920	0/0:33,0:33:98.50:0,99,1628	0/0:12,0:12:33.06:0,33,470	0/0:33,0:33:84.20:0,84,1309	0/0:15,0:15:45.14:0,45,763	0/0:22,0:22:57.19:0,57,985	0/0:12,0:12:33.11:0,33,591	0/0:15,0:15:45.11:0,45,696	0/0:12,0:12:33.10:0,33,562	0/0:14,0:14:36.10:0,36,588	0/0:16,0:16:42.14:0,42,754	0/0:13,0:13:36.07:0,36,530	0/0:29,0:29:66:0,66,966	1/1:3,20:24:9.77:679,10,0	0/0:22,0:21:54.11:0,54,846	0/0:30,0:30:84.25:0,84,1405	0/0:29,0:29:80.97:0,81,1251	0/0:30,0:30:84.22:0,84,1354	0/0:30,0:30:81.28:0,81,1453	0/0:21,0:21:49.93:0,50,776	0/0:19,0:19:54.13:0,54,854	0/0:24,0:24:63.20:0,63,1078	0/0:29,0:29:75.17:0,75,1196	0/0:7,0:7:18.06:0,18,320
chr10	71262466	.	C	CTCTCTG	774.16	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=5.760;DP=633;FS=2.036;HRun=0;HaplotypeScore=168.0090;InbreedingCoeff=0.4937;MQ=69.69;MQ0=2;MQRankSum=-5.678;QD=9.11;ReadPosRankSum=-1.553;VQSLOD=2.5234;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,18:23:19.59:853,20,0	0/0:13,0:13:33.11:0,33,755	0/0:37,0:30:51.13:0,51,957	0/1:47,0:36:0.64:1,0,1054	0/0:22,0:22:48.15:0,48,1044	0/0:30,0:30:71.64:0,72,1503	0/0:14,0:14:39.13:0,39,876	0/0:33,0:33:90.24:0,90,1743	0/0:21,0:21:54.06:0,54,1130	0/0:21,0:21:51.15:0,51,980	0/0:18,0:18:48.10:0,48,1032	0/0:22,0:22:60.20:0,60,1337	0/0:11,0:11:15.04:0,15,304	0/0:16,0:16:33.11:0,33,717	0/0:14,0:14:38.59:0,39,791	0/0:15,0:14:33.11:0,33,694	0/0:31,0:31:81.20:0,81,1700	0/1:15,0:15:24.40:24,0,27	0/0:19,0:19:48.14:0,48,1009	0/0:28,0:27:72.22:0,72,1555	0/0:26,0:26:72.18:0,72,1520	0/0:28,0:28:75.23:0,75,1552	0/0:25,0:25:75.22:0,75,1512	0/0:34,0:34:69.13:0,69,1399	0/0:22,0:22:57.18:0,57,1194	0/0:22,0:22:40.49:0,40,1260	0/0:24,0:24:54.18:0,54,1160	0/0:2,0:2:6:0,6,93
chr10	71262478	.	CTGTTTA	C	328.52	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=7.720;DP=626;FS=10.361;HRun=0;HaplotypeScore=152.0518;InbreedingCoeff=0.3142;MQ=65.15;MQ0=6;MQRankSum=-6.909;QD=7.47;ReadPosRankSum=-3.953;VQSLOD=0.7684;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:18:61:61,0,169	0/0:13,0:13:34.90:0,35,713	0/0:38,0:19:31.19:0,31,969	0/0:46,0:28:49.20:0,49,1288	0/0:24,0:24:58.71:0,59,1334	0/0:27,0:27:33.73:0,34,1155	0/0:18,0:18:43.70:0,44,1066	0/0:32,0:32:82.71:0,83,2160	0/0:21,0:21:48.25:0,48,1054	0/0:18,0:18:51.17:0,51,1266	0/0:19,0:19:39.13:0,39,968	0/0:22,0:22:59.94:0,60,1245	0/1:11,0:11:25.07:25,0,256	0/0:15,0:16:17.97:0,18,654	0/0:15,0:15:36.95:0,37,856	0/0:16,0:15:10.33:0,10,786	0/0:31,0:31:77.60:0,78,1304	1/1:7,4:11:15.05:304,15,0	0/0:26,0:26:57.86:0,58,1701	0/0:28,0:27:68.05:0,68,1496	0/0:26,0:26:69.10:0,69,1504	0/0:28,0:28:75.26:0,75,1793	0/0:22,0:22:60.18:0,60,1350	0/0:31,0:31:68.86:0,69,1327	0/0:20,0:20:47.89:0,48,1317	0/0:26,0:25:11.03:0,11,1670	0/0:19,0:19:45.07:0,45,946	0/1:3,0:3:59.24:59,0,77
chr10	71262484	.	ATGTCTC	A	89.99	PASS	AB=0.948;AC=7;AF=0.125;AN=56;BaseQRankSum=7.516;DP=616;FS=19.837;HRun=0;HaplotypeScore=149.8745;InbreedingCoeff=0.1773;MQ=63.46;MQ0=14;MQRankSum=-5.652;QD=1.15;ReadPosRankSum=-1.974;VQSLOD=1.1445;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:14.16:0,14,76	0/0:11,0:11:26.49:0,26,196	0/0:38,0:19:33.93:0,34,304	0/0:42,0:24:35.17:0,35,392	0/0:24,0:24:52.89:0,53,417	0/0:23,0:23:47.25:0,47,390	0/0:18,0:18:41.90:0,42,346	0/0:33,0:33:78.45:0,78,684	0/0:18,0:18:38.94:0,39,320	0/0:19,0:18:48.26:0,48,408	0/0:16,0:16:38.89:0,39,314	0/1:23,0:23:24.45:24,0,342	0/1:9,3:11:36.19:36,0,81	0/1:14,0:14:36.74:37,0,178	0/0:15,0:15:29.85:0,30,237	0/1:15,1:15:14.43:14,0,230	0/0:33,0:32:28.75:0,29,337	1/1:9,0:9:14.81:99,15,0	0/0:28,0:27:53.35:0,53,582	0/0:23,0:22:56.45:0,56,443	0/0:27,0:26:56.85:0,57,461	0/0:30,0:29:70.83:0,71,562	0/0:18,0:18:50.82:0,51,404	0/0:30,0:30:16.51:0,17,359	0/0:20,0:20:47.55:0,48,432	0/0:28,0:27:72.78:0,73,596	0/0:22,0:21:32.73:0,33,349	0/1:4,0:3:12.01:12,0,59
chr10	71262486	.	GTCTCTCTC	G	339.27	PASS	AB=0.963;AC=16;AF=0.381;AN=42;BaseQRankSum=0.581;DP=641;FS=15.491;HRun=0;HaplotypeScore=172.4415;InbreedingCoeff=0.2244;MQ=61.25;MQ0=23;MQRankSum=-2.648;QD=1.46;ReadPosRankSum=2.195;VQSLOD=1.9634;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:0.47:0,0,1	0/0:12,0:12:0.47:0,0,1	./.	./.	./.	0/1:23,0:23:9.97:10,0,41	./.	0/0:37,0:37:6.70:0,7,17	0/1:19,0:18:0:0,0,0	0/0:18,0:17:2.98:0,3,21	0/0:18,0:18:2.98:0,3,66	1/1:19,2:22:3.06:148,3,0	1/1:11,1:12:5.84:53,6,0	1/1:14,0:16:3.37:17,3,0	./.	0/0:15,0:16:5.33:0,5,27	1/1:27,0:31:3.90:58,4,0	0/0:9,0:9:2.04:0,2,6	1/1:29,1:29:3.01:73,3,0	./.	0/0:31,0:29:2.90:0,3,16	./.	0/0:18,0:18:3.01:0,3,80	0/1:29,0:30:9.96:10,0,19	1/1:23,0:21:1.40:7,1,0	0/0:29,0:28:7.14:0,7,92	0/1:20,2:21:13.95:82,0,14	0/0:7,0:3:6:0,6,128
chr10	71264202	.	AACCG	A	2152.34	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.942;DP=430;FS=4.915;HRun=0;HaplotypeScore=78.2610;InbreedingCoeff=0.9933;MQ=84.55;MQ0=0;MQRankSum=-9.485;QD=36.48;ReadPosRankSum=1.156;VQSLOD=3.4646;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:27.09:0,27,734	1/1:3,10:13:27.56:487,28,0	0/0:14,0:14:36.08:0,36,748	0/0:15,0:15:36.08:0,36,850	0/0:20,0:20:57.20:0,57,1482	0/0:19,0:19:57.20:0,57,1502	0/0:15,0:15:45.15:0,45,1194	0/0:28,0:28:78.27:0,78,2025	0/0:18,0:18:54.19:0,54,1477	1/1:2,12:14:33.09:539,33,0	1/1:0,8:8:18.02:289,18,0	0/0:18,0:18:54.17:0,54,1380	0/0:10,0:10:27.09:0,27,734	0/0:10,0:10:30.09:0,30,758	0/0:11,0:11:33.11:0,33,903	0/0:16,0:16:48.13:0,48,1162	0/0:30,0:30:90.31:0,90,2388	1/1:2,8:10:18.53:326,19,0	0/0:11,0:11:33.11:0,33,903	0/0:17,0:17:51.17:0,51,1359	0/0:20,0:20:60.21:0,60,1595	0/0:10,0:10:30.09:0,30,765	0/0:15,0:15:42.14:0,42,1112	0/0:15,0:15:45.15:0,45,1219	1/1:0,14:14:39.13:687,39,0	0/0:20,0:20:60.20:0,60,1545	0/0:24,0:24:72.25:0,72,1928	0/0:6,0:6:18.06:0,18,492
chr10	71264339	.	A	AT	2545.75	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-11.129;DP=496;FS=26.000;HRun=8;HaplotypeScore=48.8412;InbreedingCoeff=0.8587;MQ=68.86;MQ0=0;MQRankSum=0.702;QD=25.71;ReadPosRankSum=1.953;VQSLOD=2.0466;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:65.03:0,65,576	1/1:2,12:14:39.10:438,39,0	0/0:13,0:10:16.20:0,16,118	0/1:15,0:13:11.06:11,0,21	0/0:22,0:22:63.01:0,63,571	0/0:19,0:19:57.03:0,57,521	0/0:6,0:6:15.01:0,15,137	0/0:40,0:40:99:0,105,943	0/0:13,0:13:36.01:0,36,329	1/1:4,24:28:74.81:841,75,0	1/1:0,17:17:51.15:589,51,0	0/0:15,0:15:39.02:0,39,357	0/0:14,0:14:36.02:0,36,329	0/0:13,0:13:39.01:0,39,352	0/0:16,0:16:45.02:0,45,412	0/0:20,0:20:56.99:0,57,512	0/0:24,0:24:60.03:0,60,549	0/0:10,0:10:24.01:0,24,220	0/0:17,0:18:50.04:0,50,437	0/0:22,0:23:62.04:0,62,549	0/0:6,0:6:18.01:0,18,165	0/0:6,0:6:18:0,18,161	0/0:11,0:11:27.01:0,27,247	0/0:12,0:12:35.97:0,36,321	1/1:1,24:25:72.21:831,72,0	0/0:29,2:31:11.80:0,12,616	0/0:28,0:28:75.02:0,75,681	0/0:10,0:10:30.02:0,30,275
chr10	71264629	.	A	AT	2886.27	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-7.367;DP=787;FS=3.233;HRun=5;HaplotypeScore=77.4003;InbreedingCoeff=0.9998;MQ=82.99;MQ0=0;MQRankSum=-2.380;QD=32.80;ReadPosRankSum=2.452;VQSLOD=4.3204;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:55:99:0,159,1708	1/1:0,13:13:30.10:395,30,0	0/0:16,0:16:42.07:0,42,429	0/0:30,0:30:81.03:0,81,817	0/0:30,0:30:87.22:0,87,935	0/0:20,0:20:57.10:0,57,600	0/0:29,0:29:78.16:0,78,827	0/0:26,0:26:72.17:0,72,767	0/0:36,0:36:99:0,102,1087	1/1:2,30:32:87.28:1145,87,0	1/1:0,15:15:45.10:572,45,0	0/0:33,0:33:96.23:0,96,1023	0/0:29,0:29:69.15:0,69,727	0/0:31,0:31:93.18:0,93,973	0/0:30,0:30:81.18:0,81,862	0/0:33,0:33:99:0,99,1045	0/0:25,0:25:63.11:0,63,657	0/0:23,0:23:66.14:0,66,698	0/0:28,0:28:78.13:0,78,808	0/0:22,0:22:63.16:0,63,677	0/0:56,0:56:99:0,165,1765	0/0:17,0:17:51.11:0,51,535	0/0:17,0:17:51.09:0,51,530	0/0:26,0:26:78.16:0,78,820	1/1:5,23:28:72.23:935,72,0	0/0:28,1:29:41.72:0,42,792	0/0:43,0:43:99:0,123,1306	0/0:14,0:14:36.09:0,36,387
chr10	71268417	.	G	GTC	1908.43	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.148;DP=576;FS=0.000;HRun=0;HaplotypeScore=94.1457;InbreedingCoeff=0.9936;MQ=67.08;MQ0=4;MQRankSum=-2.347;QD=32.90;ReadPosRankSum=-0.437;VQSLOD=5.2281;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,132,1666	1/1:0,7:7:15.05:255,15,0	0/0:45,0:32:57.05:0,57,731	0/0:43,1:27:23.92:0,24,432	0/0:23,0:23:62.95:0,63,760	0/0:16,0:16:39.13:0,39,505	0/0:19,0:18:39.07:0,39,465	0/0:22,0:22:60.16:0,60,729	0/0:19,0:18:39.13:0,39,507	1/1:5,15:19:48.14:743,48,0	1/1:3,13:16:27.09:458,27,0	0/0:15,0:15:42.12:0,42,531	0/0:11,0:11:29.82:0,30,349	0/0:21,0:21:57.18:0,57,741	0/0:17,0:17:36.12:0,36,467	0/0:23,0:23:59.67:0,60,736	0/0:21,0:20:48.15:0,48,617	0/0:10,0:8:24.08:0,24,312	0/0:15,0:14:33.11:0,33,427	0/0:15,0:15:42.06:0,42,494	0/0:39,0:37:99:0,99,1225	0/0:15,0:15:36.12:0,36,468	0/0:16,0:16:33.11:0,33,428	0/0:19,0:19:44.15:0,44,568	1/1:2,13:15:36.12:611,36,0	0/0:18,0:18:48.11:0,48,580	0/0:12,0:12:33.11:0,33,424	0/0:14,0:14:42.14:0,42,546
chr10	71268465	.	C	CCT	458.22	PASS	AB=0.912;AC=10;AF=0.179;AN=56;BaseQRankSum=1.080;DP=476;FS=6.224;HRun=0;HaplotypeScore=72.6743;InbreedingCoeff=0.3626;MQ=48.14;MQ0=83;MQRankSum=-1.693;QD=4.98;ReadPosRankSum=0.636;VQSLOD=1.8773;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:31:61.04:0,61,740	1/1:4,1:5:6.02:104,6,0	0/0:18,0:8:1.25:0,1,3	0/1:16,1:10:24.99:41,0,25	0/0:14,0:13:18.05:0,18,231	0/0:15,0:12:9.03:0,9,115	0/1:25,1:16:19.27:19,0,377	0/0:23,0:19:32.26:0,32,371	0/0:22,0:16:27.06:0,27,318	1/1:8,4:8:9.86:231,10,0	1/1:4,2:5:3:26,3,0	0/0:17,0:13:26.93:0,27,288	0/0:10,0:5:12.04:0,12,159	0/0:19,0:13:34.63:0,35,360	0/1:12,1:11:37.58:38,0,126	0/0:19,0:17:33.49:0,33,395	0/0:19,0:14:26.74:0,27,316	0/0:17,0:7:12.01:0,12,144	0/0:24,0:13:24.07:0,24,304	0/0:2,0:1:3.01:0,3,41	0/0:46,0:36:26.16:0,26,489	0/0:5,0:3:6.02:0,6,82	0/0:14,0:13:21.05:0,21,253	0/0:21,0:16:31.86:0,32,383	0/1:10,3:11:8.77:143,0,9	0/0:20,0:14:21:0,21,263	0/0:12,0:11:24.04:0,24,300	0/0:7,0:5:15.05:0,15,206
chr10	71268467	.	TCTCC	T	230.43	PASS	AB=0.985;AC=9;AF=0.161;AN=56;BaseQRankSum=5.257;DP=445;FS=11.737;HRun=0;HaplotypeScore=64.3352;InbreedingCoeff=0.1734;MQ=47.78;MQ0=83;MQRankSum=-0.271;QD=2.38;ReadPosRankSum=1.668;VQSLOD=0.1301;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:31:55.77:56,0,535	1/1:3,1:4:3.90:53,4,0	0/0:13,0:7:1.25:0,1,3	0/1:16,0:9:21.36:39,0,21	0/0:12,0:11:18.05:0,18,374	0/0:12,0:9:9.03:0,9,175	0/0:26,0:16:9.99:0,10,555	0/0:21,2:18:33.96:0,34,535	0/0:21,0:14:25.91:0,26,341	0/1:11,1:8:33.42:99,0,33	1/1:6,0:5:2.79:26,3,0	0/0:16,0:12:27.06:0,27,413	0/0:10,0:5:12.04:0,12,201	0/0:19,0:13:33.40:0,33,472	0/1:13,0:11:36.16:36,0,227	0/0:18,0:16:34.40:0,34,428	0/0:18,0:13:24.72:0,25,406	0/0:17,0:7:12.04:0,12,181	0/0:23,0:11:27.05:0,27,329	0/0:3,0:2:5.98:0,6,101	0/0:44,0:32:17.34:0,17,806	0/0:5,0:3:6.02:0,6,122	0/0:13,0:12:21.06:0,21,348	0/0:19,0:15:31.17:0,31,547	0/1:9,0:7:23.65:56,0,24	0/0:16,0:10:21.07:0,21,466	0/0:12,0:11:24.04:0,24,372	0/0:7,0:5:15.05:0,15,263
chr10	71268531	.	T	TC	1537.95	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=1.126;DP=368;FS=6.466;HRun=6;HaplotypeScore=56.9823;InbreedingCoeff=0.4278;MQ=49.93;MQ0=28;MQRankSum=0.897;QD=9.80;ReadPosRankSum=-0.026;VQSLOD=0.6114;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,20:27:52.98:644,53,0	1/1:4,0:6:5.42:23,5,0	0/1:31,0:9:3.11:3,0,182	0/0:28,1:14:21.27:0,21,222	0/0:7,0:8:12.03:0,12,122	0/0:15,0:14:26.71:0,27,268	0/0:8,0:7:18.04:0,18,184	0/0:20,0:17:26.97:0,27,261	0/1:13,0:15:7.59:8,0,162	0/1:11,0:9:0.67:1,0,61	0/0:4,0:4:4.45:0,4,18	0/1:6,0:5:9.32:9,0,80	1/1:1,3:4:12.03:139,12,0	0/1:10,0:12:8.12:8,0,169	0/1:6,0:5:29.88:30,0,49	0/0:9,0:9:1.94:0,2,109	0/0:18,0:21:21.84:0,22,377	1/1:3,8:10:30.07:353,30,0	0/0:21,0:18:36.04:0,36,359	0/0:5,0:5:6.01:0,6,61	0/0:25,0:23:60.09:0,60,600	0/0:7,0:7:6.01:0,6,61	1/1:1,12:13:25.32:305,25,0	1/1:4,5:9:16.77:192,17,0	0/0:11,0:11:3.26:0,3,71	0/0:14,0:14:36.08:0,36,365	0/0:7,0:7:7.20:0,7,115	0/0:2,0:2:3.01:0,3,31
chr10	71268534	.	C	CT	424.96	PASS	AB=0.929;AC=13;AF=0.232;AN=56;BaseQRankSum=8.436;DP=382;FS=4.008;HRun=0;HaplotypeScore=65.4660;InbreedingCoeff=0.2762;MQ=54.28;MQ0=23;MQRankSum=1.615;QD=3.73;ReadPosRankSum=3.196;VQSLOD=2.8691;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:29:19.43:173,0,19	0/1:5,1:5:9.78:30,0,10	0/0:30,0:10:8.46:0,8,285	0/0:29,0:15:11.90:0,12,301	0/0:8,0:8:12.04:0,12,167	0/0:16,0:15:33.09:0,33,428	0/0:9,0:8:21.03:0,21,272	0/0:20,0:17:37.13:0,37,438	0/0:17,0:16:15.60:0,16,304	0/1:13,0:11:2.96:3,0,132	0/1:5,0:5:5.62:6,0,17	0/0:8,0:7:14.01:0,14,173	1/1:4,1:5:11.37:72,11,0	0/0:12,0:12:21.04:0,21,293	0/1:5,1:5:28.73:29,0,94	0/0:9,1:9:15.43:0,15,187	0/0:21,0:21:30.80:0,31,552	1/1:10,0:10:23.64:103,24,0	0/0:20,0:18:48.03:0,48,591	0/0:8,0:8:11.99:0,12,129	0/0:27,0:24:66.11:0,66,872	0/0:9,0:9:9.03:0,9,119	1/1:15,0:15:14.42:119,14,0	0/1:12,0:11:34.34:34,0,57	0/1:8,3:11:18.85:19,0,107	0/0:14,0:14:39.12:0,39,528	0/0:8,0:8:9.53:0,10,207	0/0:1,0:1:3.01:0,3,42
chr10	71268570	.	C	CCCCA	437.96	PASS	AB=0.718;AC=2;AF=0.036;AN=56;BaseQRankSum=4.362;DP=427;FS=11.144;HRun=0;HaplotypeScore=87.2302;InbreedingCoeff=-0.0396;MQ=69.10;MQ0=0;MQRankSum=4.793;QD=29.20;ReadPosRankSum=-1.599;VQSLOD=2.6055;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:93.30:0,93,1800	0/0:5,0:5:15.05:0,15,299	0/1:3,4:6:86.28:319,0,86	0/1:6,2:8:99:208,0,157	0/0:13,0:13:36.12:0,36,702	0/0:18,0:18:45.11:0,45,858	0/0:11,0:11:33.11:0,33,659	0/0:18,0:17:48.16:0,48,952	0/0:17,0:17:51.17:0,51,1001	0/0:17,0:17:51.18:0,51,1018	0/0:11,0:11:27.09:0,27,539	0/0:15,0:15:42.14:0,42,838	0/0:6,0:6:12.04:0,12,240	0/0:17,0:17:51.16:0,51,983	0/0:11,0:11:33.11:0,33,659	0/0:12,0:12:36.12:0,36,703	0/0:33,0:33:90.25:0,90,1707	0/0:10,0:10:30.10:0,30,599	0/0:22,0:22:54.18:0,54,1045	0/0:17,0:17:42.14:0,42,822	0/0:28,0:28:81.28:0,81,1601	0/0:10,0:10:27.09:0,27,539	0/0:20,0:20:48.16:0,48,940	0/0:15,0:15:33.11:0,33,659	0/0:14,0:14:42.14:0,42,823	0/0:25,0:25:75.26:0,75,1482	0/0:7,0:7:21.07:0,21,419	0/0:5,0:5:15.05:0,15,300
chr10	71275031	.	TA	T	182.45	PASS	AC=2;AF=0.042;AN=48;BaseQRankSum=2.402;DP=295;FS=9.612;HRun=10;HaplotypeScore=26.9432;InbreedingCoeff=0.6106;MQ=48.23;MQ0=65;MQRankSum=0.948;QD=9.60;ReadPosRankSum=-0.231;VQSLOD=0.4051;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,12:16:23.74:274,24,0	./.	0/0:7,0:4:2.03:0,2,5	0/0:5,0:1:2.97:0,3,20	0/0:21,0:18:30.04:0,30,316	0/0:9,0:6:18.05:0,18,199	0/0:6,0:6:18.01:0,18,186	0/0:19,0:13:33.09:0,33,365	0/0:9,0:8:21.02:0,21,219	./.	./.	0/0:11,0:9:27.07:0,27,298	0/0:11,0:7:18.05:0,18,199	0/0:5,0:3:9.02:0,9,100	0/0:10,0:6:18.05:0,18,197	0/0:13,0:11:33.09:0,33,365	0/0:18,0:10:27.07:0,27,298	0/0:6,0:5:5.68:0,6,29	0/0:14,0:8:21.06:0,21,232	0/0:8,0:6:18:0,18,185	0/0:7,0:5:12.03:0,12,133	0/0:9,0:7:15.02:0,15,155	0/0:19,0:12:18.05:0,18,199	0/0:10,0:6:9.02:0,9,100	./.	0/0:21,0:14:42.11:0,42,464	0/0:17,0:12:27.03:0,27,285	0/0:13,0:10:21.06:0,21,232
chr10	71277519	.	GA	G	234.94	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.707;DP=622;FS=3.338;HRun=9;HaplotypeScore=62.9261;InbreedingCoeff=0.8193;MQ=63.42;MQ0=3;MQRankSum=2.904;QD=15.66;ReadPosRankSum=1.591;VQSLOD=3.9533;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1165	0/0:9,0:9:24.07:0,24,277	0/0:16,0:14:29.72:0,30,289	0/0:10,0:6:11.91:0,12,97	0/0:28,0:28:78.20:0,78,885	0/0:15,0:15:39.12:0,39,450	0/0:18,0:18:48.14:0,48,554	0/0:27,0:28:75.05:0,75,837	0/0:29,0:29:84.21:0,84,942	0/0:41,0:37:99:0,99,1128	0/0:15,0:15:42.09:0,42,471	0/0:22,0:22:63.17:0,63,717	0/0:22,0:22:66.18:0,66,751	0/0:23,0:23:66.19:0,66,752	0/0:16,1:17:23.68:0,24,527	0/0:12,0:12:30.09:0,30,346	0/0:28,0:28:75.22:0,75,865	1/1:0,15:15:36.02:330,36,0	0/0:25,3:28:2.79:0,3,666	0/0:32,0:32:75.22:0,75,865	0/0:12,0:12:27.06:0,27,300	0/0:24,0:24:63.18:0,63,719	0/0:21,0:21:57.16:0,57,645	0/0:21,0:21:60.16:0,60,682	0/0:30,0:30:75.22:0,75,865	0/0:32,0:32:59.73:0,60,908	0/0:23,0:23:66.16:0,66,738	0/0:15,0:15:45.13:0,45,519
chr10	71278770	.	CAGAG	C	926.09	PASS	AB=0.841;AC=10;AF=0.200;AN=50;BaseQRankSum=5.297;DP=662;FS=7.774;HRun=0;HaplotypeScore=100.3498;InbreedingCoeff=0.3902;MQ=41.30;MQ0=114;MQRankSum=-2.721;QD=4.80;ReadPosRankSum=2.308;VQSLOD=1.4715;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,14:40:24.05:302,24,0	0/0:4,0:2:3.01:0,3,38	./.	0/0:32,0:6:3.92:0,4,22	0/0:11,0:15:18.06:0,18,322	0/1:21,1:21:14.79:15,0,575	0/0:21,0:20:47.37:0,47,813	0/0:15,0:7:12.04:0,12,265	0/0:26,0:26:47.63:0,48,913	0/0:32,0:19:12.04:0,12,203	./.	0/0:23,0:26:46.98:0,47,686	1/1:18,8:19:21.05:294,21,0	0/1:18,1:15:14.73:15,0,477	0/1:24,2:23:56.29:56,0,629	0/0:19,0:17:23.82:0,24,450	0/0:24,0:25:47.63:0,48,942	0/0:23,0:21:27.09:0,27,407	0/0:14,0:9:18.06:0,18,383	0/0:23,0:19:38.82:0,39,665	0/0:36,0:33:65.67:0,66,1223	0/0:27,0:25:35.06:0,35,561	1/1:13,2:11:3.01:48,3,0	0/1:15,12:26:14.68:344,0,15	./.	0/0:21,0:17:29.84:0,30,579	0/0:17,0:18:26.56:0,27,425	0/0:17,0:18:29.81:0,30,557
chr10	71279387	.	G	GC	624.98	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=2.249;DP=777;FS=5.072;HRun=0;HaplotypeScore=85.0670;InbreedingCoeff=0.9124;MQ=65.17;MQ0=9;MQRankSum=-1.714;QD=16.89;ReadPosRankSum=-2.738;VQSLOD=4.6422;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:82,0:82:99:0,221,3023	1/1:1,5:4:9.03:144,9,0	0/0:23,0:19:53.48:0,53,682	0/0:21,0:20:52.41:0,52,703	0/0:14,0:14:36.12:0,36,499	0/0:18,0:17:52.06:0,52,714	0/0:29,0:29:81.27:0,81,1127	0/0:21,0:21:54.17:0,54,737	0/0:24,0:24:69.23:0,69,963	1/1:0,5:4:9.03:144,9,0	1/1:2,3:2:3.01:48,3,0	0/0:37,0:37:99:0,102,1417	0/0:43,0:43:99:0,114,1586	0/0:24,0:24:72.24:0,72,1001	0/0:16,0:16:48.16:0,48,667	0/0:26,0:26:75.21:0,75,1026	0/0:45,0:45:99:0,132,1822	0/0:46,0:44:99:0,129,1781	0/0:26,0:26:78.26:0,78,1090	0/0:19,0:19:54.18:0,54,752	0/0:69,0:69:99:0,199,2745	0/0:21,0:21:60.19:0,60,809	0/0:27,0:27:75.25:0,75,1047	0/0:60,0:60:99:0,166,2302	1/1:0,21:11:27.09:431,27,0	0/0:21,0:21:63.21:0,63,879	0/0:20,0:20:57.18:0,57,779	0/0:8,0:7:21.07:0,21,294
chr10	71280017	.	G	GGGT	2928.36	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.688;DP=735;FS=33.945;HRun=0;HaplotypeScore=126.0526;InbreedingCoeff=0.9996;MQ=80.14;MQ0=0;MQRankSum=-6.065;QD=55.25;ReadPosRankSum=1.718;VQSLOD=2.2476;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,122,1885	1/1:1,10:12:33.11:744,33,0	0/0:31,0:31:87.28:0,87,1365	0/0:21,0:21:51.17:0,51,809	0/0:22,0:22:66.23:0,66,1094	0/0:25,0:25:51.17:0,51,850	0/0:31,0:31:90.29:0,90,1473	0/0:33,0:33:81.27:0,81,1310	0/0:24,0:24:69.11:0,69,1055	1/1:3,16:16:45.15:979,45,0	1/1:0,13:13:36.12:814,36,0	0/0:40,0:40:99:0,114,1810	0/0:34,0:33:93.32:0,93,1511	0/0:17,0:17:45.13:0,45,723	0/0:24,0:24:72.19:0,72,1138	0/0:30,0:30:84.27:0,84,1373	0/0:32,0:32:87.30:0,87,1449	0/0:13,0:13:39.13:0,39,641	0/0:25,0:25:69.23:0,69,1120	0/0:21,0:21:60.20:0,60,991	0/0:48,0:48:99:0,135,2158	0/0:35,0:35:96.33:0,96,1599	0/0:25,0:25:72.25:0,72,1165	0/0:22,0:22:63.21:0,63,1022	1/1:1,8:9:27.09:551,27,0	0/0:30,0:30:87.29:0,87,1425	0/0:37,0:36:99:0,108,1798	0/0:13,0:13:39.13:0,39,650
chr10	71280065	.	AGGGTGT	A	1883.60	PASS	AB=0.962;AC=9;AF=0.161;AN=56;BaseQRankSum=8.554;DP=660;FS=39.098;HRun=0;HaplotypeScore=148.3128;InbreedingCoeff=0.8925;MQ=83.75;MQ0=0;MQRankSum=-8.409;QD=28.98;ReadPosRankSum=1.063;VQSLOD=1.7437;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.32:0,93,3190	1/1:2,3:5:9.03:212,9,0	0/0:26,0:26:69.20:0,69,2234	0/0:26,0:26:75.22:0,75,2288	0/0:16,0:16:48.16:0,48,1633	0/0:20,0:20:57.20:0,57,2028	0/0:24,0:24:66.23:0,66,2271	0/0:32,0:32:81.26:0,81,2769	0/0:22,0:22:63.22:0,63,2229	1/1:1,20:19:48.15:1044,48,0	1/1:0,6:5:12.04:283,12,0	0/0:34,0:34:96.29:0,96,3263	0/0:27,0:27:75.26:0,75,2647	0/0:24,0:24:72.25:0,72,2492	0/0:25,0:25:69.24:0,69,2396	0/0:31,0:31:87.30:0,87,3058	0/0:31,0:31:87.30:0,87,3027	0/0:16,0:16:45.11:0,45,1496	0/0:18,0:18:48.16:0,48,1669	0/0:24,0:24:66.18:0,66,2225	0/0:43,0:43:99:0,123,4373	0/0:33,0:33:96.33:0,96,3371	0/0:28,0:28:78.27:0,78,2701	0/0:23,0:23:69.24:0,69,2423	1/1:1,7:8:21.07:495,21,0	0/1:24,1:25:1.58:2,0,2192	0/0:28,0:27:84.29:0,84,2956	0/0:11,0:11:33.11:0,33,1175
chr10	71280389	.	CCATACATA	C	1226.53	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=4.290;DP=425;FS=2.787;HRun=0;HaplotypeScore=104.2572;InbreedingCoeff=0.8570;MQ=66.28;MQ0=5;MQRankSum=0.743;QD=16.57;ReadPosRankSum=1.468;VQSLOD=2.7237;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:3.01:48,3,0	1/1:8,0:7:12.04:168,12,0	0/0:32,0:20:38.94:0,39,881	0/0:28,0:16:38.49:0,38,737	0/0:22,0:22:48.12:0,48,850	0/0:19,0:19:37.26:0,37,664	0/0:19,0:18:35.75:0,36,529	0/0:17,0:16:30.05:0,30,406	0/0:9,0:9:5.92:0,6,81	1/1:1,17:17:51.14:782,51,0	./.	0/0:11,0:11:18.06:0,18,324	./.	0/0:8,0:8:6.02:0,6,163	0/0:13,0:13:18.03:0,18,424	0/0:14,0:14:15.05:0,15,250	0/0:25,0:23:57.12:0,57,941	0/0:17,0:17:48.14:0,48,761	0/0:6,0:5:15.04:0,15,259	0/0:14,0:14:27.09:0,27,481	0/0:19,0:19:51.17:0,51,1023	0/0:13,0:13:30.06:0,30,686	1/1:6,0:6:12.04:178,12,0	1/1:8,0:7:5.97:67,6,0	1/1:13,0:13:9.03:148,9,0	0/0:19,0:19:51.16:0,51,963	0/0:14,0:13:21:0,21,328	0/0:6,0:6:15.05:0,15,370
chr10	71280392	.	TACATACATACACACACACACACACACACACACACACAC	T	490.72	PASS	AB=1.000;AC=8;AF=0.154;AN=52;BaseQRankSum=0.810;DP=423;FS=0.000;HRun=0;HaplotypeScore=289.0582;InbreedingCoeff=0.5366;MQ=61.29;MQ0=10;MQRankSum=-0.632;QD=9.09;ReadPosRankSum=-2.266;VQSLOD=1.6112;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:3,18:20:1.66:0,2,90	0/1:8,0:7:72.71:73,0,270	0/0:29,0:17:38.94:0,39,998	0/0:27,0:15:38.49:0,38,1050	0/0:23,0:23:49:0,49,3354	0/0:19,0:19:37.47:0,37,2070	0/0:17,0:16:36.41:0,36,1282	0/0:13,0:12:30.05:0,30,613	0/0:10,0:10:5.84:0,6,104	0/1:19,0:17:99:162,0,2189	./.	0/0:12,0:12:18.06:0,18,1039	./.	0/0:10,0:10:6.02:0,6,459	0/0:13,0:13:18.06:0,18,1214	0/0:12,0:12:15.05:0,15,550	0/0:28,0:26:63.14:0,63,3045	0/0:18,0:17:48.14:0,48,3083	0/0:8,0:5:15.04:0,15,621	0/0:13,0:13:27.09:0,27,1735	0/0:21,0:21:51.17:0,51,5028	0/0:13,0:13:30.06:0,30,2172	1/1:6,0:6:12.04:178,12,0	1/1:8,0:7:5.97:67,6,0	1/1:13,0:13:9.03:148,9,0	0/0:19,0:18:51.16:0,51,3919	0/0:14,0:12:21.07:0,21,1571	0/0:5,0:5:15.05:0,15,1905
chr10	71280394	.	CATACAT	C	1212.75	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=4.346;DP=418;FS=2.644;HRun=0;HaplotypeScore=89.3945;InbreedingCoeff=0.8558;MQ=59.72;MQ0=10;MQRankSum=0.578;QD=16.84;ReadPosRankSum=0.541;VQSLOD=3.1087;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:19:3.01:48,3,0	1/1:6,0:5:12.04:168,12,0	0/0:29,0:17:38.94:0,39,881	0/0:25,0:13:38.49:0,38,737	0/0:23,0:23:48.12:0,48,783	0/0:19,0:19:37.21:0,37,596	0/0:17,0:17:34.09:0,34,508	0/0:12,0:11:30.05:0,30,406	0/0:10,0:10:5.88:0,6,81	1/1:19,0:17:51.14:768,51,0	./.	0/0:12,0:12:18.06:0,18,295	./.	0/0:10,0:10:6.02:0,6,137	0/0:13,0:13:18.03:0,18,380	0/0:12,0:12:18.06:0,18,306	0/0:29,0:27:62.62:0,63,934	0/0:17,0:16:48:0,48,671	0/0:8,0:5:15.04:0,15,247	0/0:12,0:12:27.09:0,27,436	0/0:21,0:21:49.98:0,50,896	0/0:13,0:13:30.06:0,30,590	1/1:6,0:6:12.04:178,12,0	1/1:8,0:7:5.97:67,6,0	1/1:13,0:13:9.03:148,9,0	0/0:19,0:18:51.16:0,51,914	0/0:14,0:13:14.60:0,15,281	0/0:5,0:5:15.05:0,15,298
chr10	71280398	.	CAT	C	566.22	PASS	AB=1.000;AC=13;AF=0.250;AN=52;BaseQRankSum=7.547;DP=435;FS=3.452;HRun=0;HaplotypeScore=70.5514;InbreedingCoeff=0.7296;MQ=54.99;MQ0=15;MQRankSum=-0.935;QD=6.22;ReadPosRankSum=-1.925;VQSLOD=2.6004;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:2.99:24,3,0	1/1:6,0:5:11.88:85,12,0	0/0:27,0:15:38.15:0,38,410	0/0:24,0:12:29.38:0,29,333	0/0:25,0:25:15.18:0,15,269	0/0:23,0:20:26.17:0,26,272	0/0:18,0:17:30.66:0,31,242	0/0:8,0:7:17.22:0,17,151	0/0:11,1:10:5.68:0,6,38	1/1:21,0:17:47.82:384,48,0	./.	0/0:13,0:13:17.73:0,18,137	./.	0/0:7,5:12:6:0,6,55	0/0:13,0:13:17.97:0,18,158	0/0:12,0:12:17.99:0,18,156	0/0:30,0:28:50.63:0,51,422	0/0:17,0:16:44.70:0,45,347	0/0:8,0:5:7.93:0,8,70	0/0:11,0:11:26.88:0,27,211	0/0:26,0:24:26.63:0,27,346	0/0:13,0:13:26.99:0,27,282	1/1:6,0:6:11.94:92,12,0	1/1:8,0:7:2.99:24,3,0	1/1:13,0:13:8.99:74,9,0	0/0:20,0:19:46.99:0,47,435	0/1:16,0:14:48.43:48,0,73	0/0:8,0:5:12.84:0,13,104
chr10	71280400	.	T	TAC	263.89	PASS	AB=0.954;AC=19;AF=0.633;AN=30;BaseQRankSum=-0.742;DP=449;FS=0.000;HRun=0;HaplotypeScore=74.1276;InbreedingCoeff=0.1038;MQ=54.33;MQ0=18;MQRankSum=0.112;QD=1.20;ReadPosRankSum=-1.101;VQSLOD=1.4084;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:24,1:25:8.73:73,9,0	1/1:21,0:18:3.38:14,3,0	0/1:16,0:15:13.60:14,0,24	./.	./.	0/1:21,0:17:0:0,0,0	./.	1/1:10,7:17:3.01:43,3,0	./.	1/1:12,0:12:3.01:43,3,0	1/1:13,1:13:6:66,6,0	0/0:8,5:14:3.01:0,3,31	0/1:21,7:28:32.73:33,0,48	./.	1/1:10,0:6:2.80:13,3,0	./.	0/1:28,0:27:14.44:31,0,14	0/0:12,0:12:5.97:0,6,51	./.	./.	./.	0/0:21,0:18:2.99:0,3,26	1/1:17,0:15:1.42:36,1,0	0/1:8,0:5:0:0,0,0
chr10	71281896	.	G	GTGTGTA	330.66	PASS	AB=0.965;AC=8;AF=0.190;AN=42;BaseQRankSum=1.595;DP=728;FS=0.000;HRun=0;HaplotypeScore=79.8175;InbreedingCoeff=0.0611;MQ=15.03;MQ0=515;MQRankSum=-0.722;QD=2.11;ReadPosRankSum=-0.223;VQSLOD=1.1896;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:6:3.01:0,3,66	0/0:12,0:8:11.90:0,12,251	./.	./.	0/0:16,0:8:0:0,0,0	0/0:24,0:9:6.02:0,6,138	0/1:22,0:5:0:0,0,0	./.	0/0:21,2:7:5.03:0,5,18	0/1:22,3:6:99:143,0,257	0/1:22,0:6:0:0,0,0	0/0:29,3:14:19.70:0,20,355	0/0:26,0:15:17.27:0,17,289	0/0:13,0:1:3.01:0,3,69	0/0:28,0:7:4.93:0,5,132	0/1:18,1:10:38.84:39,0,126	0/0:22,0:5:5.97:0,6,88	./.	1/1:27,0:1:3.01:40,3,0	./.	./.	0/0:29,2:21:7.42:0,7,70	./.	0/0:52,0:5:0:0,0,0	0/0:38,0:6:3.01:0,3,69	0/1:18,1:9:99:174,0,210	0/0:20,0:7:4.87:0,5,93	0/1:23,0:3:38.51:39,0,63
chr10	71281906	.	G	GTGTT	112.27	PASS	AB=0.965;AC=15;AF=0.341;AN=44;BaseQRankSum=4.104;DP=721;FS=0.000;HRun=0;HaplotypeScore=77.3711;InbreedingCoeff=-0.0308;MQ=15.56;MQ0=501;MQRankSum=-0.839;QD=0.46;ReadPosRankSum=-2.516;VQSLOD=0.4075;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:8:3:0,3,53	0/0:11,0:7:11.73:0,12,212	./.	./.	0/0:18,1:8:4.93:0,5,21	0/1:17,7:12:9.01:9,0,110	1/1:20,3:6:0.86:2,1,0	./.	1/1:24,0:7:7.34:42,7,0	0/1:22,0:7:59.38:59,0,195	1/1:22,0:6:0.89:2,1,0	0/0:33,0:14:7.36:0,7,249	0/0:28,0:16:9.36:0,9,154	0/0:16,0:2:1.94:0,2,49	0/0:29,0:9:3.56:0,4,114	0/1:22,0:10:0.60:1,0,165	0/1:22,0:5:41.65:42,0,44	0/0:18,0:2:3.01:0,3,30	1/1:24,0:2:3.45:23,3,0	./.	./.	0/0:28,0:18:0.34:0,0,49	./.	0/0:51,0:5:1.25:0,1,3	0/0:40,0:6:3.01:0,3,52	0/1:19,0:10:32.31:32,0,80	0/1:21,0:5:10.34:10,0,75	0/1:19,0:3:6.70:7,0,50
chr10	71281913	.	AGTGT	A	85.93	PASS	AB=0.941;AC=10;AF=0.250;AN=40;BaseQRankSum=-1.405;DP=691;FS=0.000;HRun=0;HaplotypeScore=70.6500;InbreedingCoeff=0.3912;MQ=15.52;MQ0=480;MQRankSum=0.081;QD=0.62;ReadPosRankSum=-0.894;VQSLOD=1.4231;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:6:3:28,3,0	0/1:10,1:7:0:0,0,0	./.	./.	0/0:18,0:7:5.81:0,6,33	0/0:25,0:13:4.96:0,5,23	1/1:24,0:7:0.82:2,1,0	./.	0/0:23,0:7:7.76:0,8,40	0/0:18,3:7:12:0,12,156	0/0:17,6:6:0:0,0,0	0/0:34,0:15:4.50:0,4,54	1/1:13,13:13:8.97:102,9,0	./.	0/0:27,0:9:2.13:0,2,25	0/0:22,0:10:23.62:0,24,174	0/0:23,0:5:9.55:0,10,58	1/1:10,7:3:3.01:48,3,0	0/0:23,0:4:8.26:0,8,63	./.	./.	0/1:27,0:17:11.16:14,0,11	./.	0/0:40,13:5:1.24:0,1,3	./.	0/0:17,0:8:12.56:0,13,91	0/0:18,0:4:4.17:0,4,20	0/0:19,0:2:3.01:0,3,45
chr10	71282188	.	C	CA	1361.89	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.896;DP=567;FS=12.122;HRun=0;HaplotypeScore=66.0031;InbreedingCoeff=0.9661;MQ=61.55;MQ0=12;MQRankSum=-6.001;QD=26.19;ReadPosRankSum=2.788;VQSLOD=3.8337;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,9:3:9.03:144,9,0	0/0:6,0:6:12.04:0,12,167	0/0:30,0:30:90.30:0,90,1253	0/0:19,0:18:53.49:0,53,683	0/0:18,0:18:45.15:0,45,628	0/0:25,0:25:60.20:0,60,835	0/0:30,0:30:78.26:0,78,1084	0/0:22,0:22:63.21:0,63,877	0/0:18,0:18:45.15:0,45,626	0/0:22,0:22:66.21:0,66,901	0/0:16,0:16:39.13:0,39,544	0/0:25,0:25:75.25:0,75,1036	1/1:0,4:4:12.04:191,12,0	0/0:31,0:31:72.24:0,72,1001	0/0:21,0:21:51.17:0,51,710	0/0:19,0:19:57.19:0,57,794	0/0:28,0:28:84.28:0,84,1171	1/1:1,16:15:42.14:671,42,0	0/0:20,0:20:57.19:0,57,793	0/0:18,0:18:51.17:0,51,711	0/0:42,0:42:99:0,120,1657	0/0:33,0:33:87.27:0,87,1176	1/1:0,9:7:18.06:287,18,0	1/1:1,10:8:15.05:237,15,0	0/0:15,0:14:39.13:0,39,544	0/0:20,0:20:57.19:0,57,795	0/0:23,0:23:69.23:0,69,958	0/0:14,0:14:42.14:0,42,587
chr10	71284140	.	CAG	C	1982.12	PASS	AB=0.899;AC=18;AF=0.375;AN=48;BaseQRankSum=10.367;DP=593;FS=0.000;HRun=0;HaplotypeScore=70.0521;InbreedingCoeff=0.0926;MQ=47.55;MQ0=165;MQRankSum=-1.555;QD=6.19;ReadPosRankSum=1.124;VQSLOD=2.2182;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:3:6:0,6,52	1/1:2,12:12:36.11:422,36,0	0/1:29,3:11:84.47:84,0,125	0/0:39,0:12:20.42:0,20,271	0/0:20,0:14:21.97:0,22,503	0/1:18,2:17:48.33:48,0,373	0/0:33,0:22:48.16:0,48,753	0/0:28,0:18:45.06:0,45,621	0/0:18,1:17:10.03:0,10,625	1/1:4,15:17:47.97:541,48,0	1/1:8,9:9:24.07:281,24,0	0/1:24,4:22:99:101,0,383	./.	0/1:21,2:21:36.28:36,0,560	0/0:18,1:17:3.95:0,4,530	0/1:19,2:20:25.21:25,0,561	0/1:23,5:26:99:115,0,764	./.	0/1:18,1:12:2.10:2,0,410	0/0:23,0:10:24.08:0,24,377	0/1:29,3:30:56.45:56,0,725	0/0:27,1:18:10.04:0,10,616	./.	./.	1/1:8,11:13:35.94:401,36,0	0/1:27,2:22:16.17:16,0,689	0/0:30,0:28:48.16:0,48,739	0/1:9,1:8:17.11:17,0,218
chr10	71285994	.	GGGA	G	150.02	PASS	AB=1.000;AC=5;AF=0.096;AN=52;BaseQRankSum=2.040;DP=235;FS=2.259;HRun=0;HaplotypeScore=36.0873;InbreedingCoeff=0.3357;MQ=90.49;MQ0=8;MQRankSum=-0.947;QD=5.77;ReadPosRankSum=-0.042;VQSLOD=1.7533;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:36,0:13:25.91:0,26,228	0/0:27,0:12:15.51:0,16,217	0/0:4,0:4:1.16:0,1,23	0/0:8,0:8:23.99:0,24,267	0/0:12,0:12:22.12:0,22,216	0/0:7,0:7:17.97:0,18,153	0/0:4,0:4:12.01:0,12,122	0/0:4,0:4:9.01:0,9,101	0/0:7,0:7:8.59:0,9,59	0/0:5,0:5:9.01:0,9,102	0/1:6,0:6:21.31:36,0,21	0/0:9,0:9:23.98:0,24,212	0/0:4,0:4:3.01:0,3,47	0/0:6,0:6:14.95:0,15,149	0/0:8,0:8:18.02:0,18,212	1/1:9,0:9:1.27:74,1,0	0/0:6,0:6:15:0,15,145	0/0:5,0:5:3.48:0,3,49	0/0:16,0:16:6.36:0,6,205	0/0:6,0:6:9:0,9,76	0/0:3,0:3:2.98:0,3,22	1/1:11,0:11:17.47:151,17,0	0/0:7,0:7:15.01:0,15,145	0/0:4,0:4:8.99:0,9,103	0/0:7,0:7:17.82:0,18,149	0/0:1,0:1:3:0,3,25
chr10	71287718	.	G	GT	1470.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-9.071;DP=787;FS=10.182;HRun=8;HaplotypeScore=76.0473;InbreedingCoeff=0.9973;MQ=72.54;MQ0=0;MQRankSum=-3.384;QD=27.74;ReadPosRankSum=-0.534;VQSLOD=3.5090;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,46:53:99:1565,114,0	0/0:9,0:9:24.01:0,24,220	0/0:17,0:17:39.01:0,39,356	0/0:22,0:23:44.33:0,44,368	0/0:29,0:29:81.04:0,81,741	0/0:17,0:17:48.03:0,48,439	0/0:28,0:28:42.37:0,42,553	0/0:32,0:32:83.95:0,84,750	0/0:37,0:37:99:0,108,988	0/0:37,0:37:93.02:0,93,846	0/0:27,0:27:75.04:0,75,686	0/0:30,0:30:84.04:0,84,769	0/0:29,0:29:78.02:0,78,708	0/0:28,0:28:75.02:0,75,681	0/0:54,0:54:99:0,147,1346	0/0:26,0:25:78.04:0,78,714	0/0:34,0:34:99:0,102,934	0/0:18,0:18:51.02:0,51,467	0/0:27,0:28:68.04:0,68,605	0/0:41,0:41:99:0,102,934	0/0:27,0:27:69.03:0,69,632	0/0:31,0:31:78.04:0,78,713	0/0:25,0:25:66:0,66,599	0/0:21,0:21:51:0,51,467	0/0:24,0:24:66.03:0,66,604	0/0:26,0:26:75.03:0,75,682	0/0:26,0:26:63.02:0,63,576	0/0:10,0:10:30.02:0,30,274
chr10	71288793	.	AAAGG	A	3133.47	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.835;DP=773;FS=2.069;HRun=0;HaplotypeScore=126.6712;InbreedingCoeff=0.9860;MQ=64.59;MQ0=2;MQRankSum=1.400;QD=32.30;ReadPosRankSum=1.418;VQSLOD=3.9576;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.10:0,57,1226	1/1:3,7:10:12:176,12,0	0/0:30,0:17:22.30:0,22,372	0/0:21,0:15:15.52:0,16,334	0/0:45,0:45:99:0,117,2469	0/0:46,0:46:99:0,123,2645	0/0:29,0:29:83.52:0,84,1645	0/0:33,0:33:69.14:0,69,1094	0/0:24,0:24:66.19:0,66,1494	1/1:5,35:40:99:1665,108,0	1/1:5,26:31:68.73:929,69,0	0/0:25,0:25:66.07:0,66,1217	0/0:27,0:27:78.20:0,78,1646	0/0:19,0:19:48.16:0,48,1210	0/0:36,0:35:93.22:0,93,1930	0/0:30,0:30:72.17:0,72,1440	0/0:39,0:39:99:0,104,2188	0/0:24,0:23:53.79:0,54,895	0/0:12,0:12:27:0,27,479	0/0:37,0:37:90.13:0,90,1721	0/0:22,0:22:66.17:0,66,1404	0/0:32,0:32:81.11:0,81,1402	0/0:31,0:31:78.18:0,78,1610	0/0:20,0:20:54.13:0,54,1214	1/1:3,13:16:30.10:521,30,0	0/0:20,0:19:51.16:0,51,1182	0/0:37,0:37:99:0,102,1985	0/0:15,0:15:45.14:0,45,1032
chr10	71290321	.	A	AT	2140.11	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.774;DP=596;FS=4.238;HRun=0;HaplotypeScore=61.0133;InbreedingCoeff=0.9815;MQ=63.94;MQ0=0;MQRankSum=1.240;QD=38.22;ReadPosRankSum=0.996;VQSLOD=3.7474;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,105,1439	1/1:0,9:9:27.09:431,27,0	0/0:10,0:10:14.48:0,14,299	0/0:13,0:13:36.12:0,36,509	0/0:14,0:14:39.11:0,39,527	0/0:27,0:27:69.23:0,69,964	0/0:26,0:26:75.25:0,75,1047	0/0:24,0:24:69.22:0,69,948	0/0:22,0:22:57.19:0,57,796	1/1:0,16:16:48.16:767,48,0	1/1:0,16:16:42.14:671,42,0	0/0:21,0:21:57.19:0,57,796	0/0:19,0:19:45.14:0,45,611	0/0:22,0:22:57.19:0,57,792	0/0:20,0:20:36.05:0,36,503	0/0:30,0:30:81.24:0,81,1106	0/0:35,0:35:96.32:0,96,1340	0/0:13,0:12:36.12:0,36,502	0/0:22,0:21:57.16:0,57,769	0/0:14,0:14:42.14:0,42,566	0/0:57,0:57:99:0,162,2219	0/0:14,0:14:42.14:0,42,579	0/0:7,0:7:18.06:0,18,252	0/0:36,0:36:93.31:0,93,1298	1/1:1,14:15:27.09:431,27,0	0/0:23,1:24:18.26:0,18,798	0/0:24,0:24:63.20:0,63,862	0/0:5,0:5:12.01:0,12,148
chr10	71291478	.	A	AT	1901.41	PASS	AC=18;AF=0.333;AN=54;BaseQRankSum=5.351;DP=668;FS=0.000;HRun=7;HaplotypeScore=63.0299;InbreedingCoeff=0.9225;MQ=41.96;MQ0=69;MQRankSum=-9.961;QD=11.67;ReadPosRankSum=-2.363;VQSLOD=1.8216;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,10:11:15.05:180,15,0	1/1:2,4:4:3.01:36,3,0	./.	0/0:7,0:2:3:0,3,29	0/0:32,0:27:42.06:0,42,405	0/0:31,0:30:60.09:0,60,579	0/0:20,0:17:23.95:0,24,216	0/0:36,0:18:39.01:0,39,364	0/0:24,0:23:48.07:0,48,463	1/1:11,9:14:24.07:290,24,0	1/1:5,18:19:14.96:162,15,0	0/0:27,0:25:59.76:0,60,579	1/1:6,26:25:48.15:579,48,0	0/0:20,0:18:39.05:0,39,372	0/0:24,0:23:44.92:0,45,426	0/0:27,0:26:63.06:0,63,599	0/0:53,0:44:99:0,99,940	1/1:0,9:7:12.01:145,12,0	0/0:27,0:11:30.05:0,30,290	0/0:37,0:27:48.05:0,48,458	0/0:21,0:17:36.05:0,36,348	0/0:29,0:27:65.10:0,65,605	1/1:9,17:21:33.02:366,33,0	1/1:5,6:7:9.03:109,9,0	1/1:3,15:14:21.02:237,21,0	0/0:29,0:25:75.12:0,75,724	0/0:38,0:32:81.05:0,81,772	0/0:18,0:15:21.03:0,21,203
chr10	71294964	.	CGT	C	1729.63	PASS	AB=0.878;AC=45;AF=0.900;AN=50;BaseQRankSum=2.760;DP=586;FS=7.616;HRun=0;HaplotypeScore=103.1689;InbreedingCoeff=-0.1740;MQ=63.70;MQ0=4;MQRankSum=-0.833;QD=3.26;ReadPosRankSum=1.943;VQSLOD=1.7235;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,2:27:27.28:103,0,27	1/1:4,0:5:5.68:28,6,0	./.	./.	1/1:20,0:20:3:32,3,0	0/1:13,2:15:22.90:23,0,41	1/1:20,5:25:5.97:63,6,0	./.	1/1:24,2:26:11.98:114,12,0	1/1:14,0:20:8.52:42,9,0	1/1:19,0:22:8.52:42,9,0	1/1:15,5:20:2.75:32,3,0	1/1:17,0:18:2.84:14,3,0	1/1:13,5:17:9.02:95,9,0	1/1:22,0:26:5.68:28,6,0	1/1:11,7:21:17.58:138,18,0	0/1:19,7:27:1.40:335,0,1	1/1:13,0:16:2.78:14,3,0	1/1:21,3:24:9.02:95,9,0	1/1:21,6:28:19.91:178,20,0	0/1:38,1:40:64.27:103,0,64	1/1:17,1:18:8.61:73,9,0	1/1:19,0:19:2.84:14,3,0	1/1:24,0:30:8.52:42,9,0	1/1:10,0:16:14.20:70,14,0	1/1:15,3:17:6.02:64,6,0	0/1:18,4:22:34.40:56,0,34	1/1:3,1:5:5.85:46,6,0
chr10	71295456	.	T	TAC	3814.90	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=13.606;DP=656;FS=4.249;HRun=0;HaplotypeScore=89.4293;InbreedingCoeff=0.8825;MQ=66.01;MQ0=0;MQRankSum=-3.302;QD=41.47;ReadPosRankSum=1.447;VQSLOD=5.5939;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.73:0,82,1142	1/1:1,10:11:27.09:494,27,0	0/0:4,0:4:5.95:0,6,61	0/1:6,0:7:3.13:3,0,37	0/0:37,0:37:99:0,108,1507	0/0:22,0:22:66.22:0,66,946	0/0:21,0:21:63.19:0,63,883	0/0:30,0:30:87.28:0,87,1215	0/0:30,0:30:84.28:0,84,1203	1/1:4,21:25:66.21:1176,66,0	1/1:2,23:26:63.22:1153,63,0	0/0:24,0:24:69.23:0,69,988	0/0:21,0:21:63.21:0,63,903	0/0:21,0:21:57.19:0,57,815	0/0:29,0:29:87.26:0,87,1209	0/0:24,0:24:69.23:0,69,988	0/0:29,0:29:87.29:0,87,1245	0/0:15,0:15:39.10:0,39,537	0/0:22,0:22:57.60:0,58,837	0/0:39,0:39:99:0,114,1633	0/0:19,0:19:51.17:0,51,729	0/0:27,0:27:81.27:0,81,1157	0/0:29,0:29:81.25:0,81,1141	0/0:21,0:21:60.16:0,60,837	1/1:2,21:23:54.19:988,54,0	0/0:22,0:22:60.20:0,60,860	0/0:34,0:34:96.31:0,96,1353	0/0:13,0:13:39.11:0,39,533
chr10	71297863	.	G	GTTT	2317.64	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.696;DP=530;FS=19.325;HRun=7;HaplotypeScore=111.0090;InbreedingCoeff=0.9867;MQ=66.59;MQ0=3;MQRankSum=-9.080;QD=30.90;ReadPosRankSum=-4.212;VQSLOD=-0.0136;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:51.14:0,51,684	1/1:4,5:9:27.05:452,27,0	0/0:18,0:15:33.05:0,33,409	0/0:18,0:11:16.26:0,16,182	0/0:21,0:21:54.17:0,54,724	0/0:23,0:22:57.15:0,57,730	0/0:16,0:16:24.05:0,24,318	0/0:30,0:29:63.15:0,63,793	0/0:16,0:15:33.10:0,33,438	1/1:15,5:18:42.09:646,42,0	1/1:14,4:11:29.54:459,30,0	0/0:11,0:11:27.08:0,27,353	0/0:16,0:16:24.07:0,24,315	0/0:20,0:20:48.14:0,48,624	0/0:14,0:14:30.08:0,30,404	0/0:18,0:18:48.03:0,48,598	0/0:13,0:13:30.09:0,30,404	0/0:18,0:17:27.08:0,27,363	0/0:16,0:13:36.07:0,36,443	0/0:24,0:24:60.15:0,60,779	0/0:21,0:21:45.11:0,45,587	0/0:18,0:18:39.05:0,39,497	0/0:17,0:17:45.13:0,45,583	0/0:18,0:18:39.07:0,39,503	1/1:20,7:25:52.44:922,52,0	0/0:24,0:24:12.80:0,13,606	0/0:29,0:29:75.20:0,75,975	0/0:13,0:13:33.05:0,33,441
chr10	71297893	.	GTT	G	1334.70	PASS	AB=0.887;AC=13;AF=0.232;AN=56;BaseQRankSum=3.679;DP=567;FS=5.894;HRun=11;HaplotypeScore=103.0605;InbreedingCoeff=0.5130;MQ=53.81;MQ0=13;MQRankSum=-1.102;QD=7.41;ReadPosRankSum=1.996;VQSLOD=1.1486;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,18:23:42.06:446,42,0	0/0:7,0:9:17.67:0,18,151	0/0:36,0:11:16.41:0,16,105	0/1:24,0:6:2.72:3,0,24	0/0:32,0:32:72.41:0,72,810	0/0:18,0:17:41.92:0,42,563	0/0:14,0:16:32.57:0,33,424	0/0:30,0:27:58.52:0,59,710	0/0:11,0:10:24.05:0,24,339	0/1:10,0:14:16.67:17,0,127	0/1:13,0:15:33.61:34,0,193	0/0:5,0:6:11.97:0,12,103	1/1:2,8:10:3:31,3,0	0/0:20,0:22:32.80:0,33,297	0/0:13,0:13:24.08:0,24,352	0/0:17,0:16:32.96:0,33,441	0/0:21,0:21:48.04:0,48,644	0/1:3,22:26:1.51:269,0,2	0/0:23,0:23:49.38:0,49,592	0/0:27,0:29:70.07:0,70,836	0/0:15,0:14:28.90:0,29,396	0/0:6,0:20:24.93:0,25,254	1/1:6,17:22:34.97:371,35,0	1/1:6,9:14:30.07:318,30,0	0/1:20,0:25:14.10:14,0,262	0/0:22,0:22:4.88:0,5,471	0/0:22,0:21:46.69:0,47,649	0/0:21,0:21:44.49:0,44,595
chr10	71297912	.	T	TTTTG	1368.19	PASS	AB=0.881;AC=8;AF=0.143;AN=56;BaseQRankSum=5.595;DP=565;FS=10.985;HRun=0;HaplotypeScore=125.6976;InbreedingCoeff=0.5668;MQ=58.21;MQ0=11;MQRankSum=-4.968;QD=11.90;ReadPosRankSum=-0.060;VQSLOD=2.1415;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:48.90:0,49,712	0/1:5,4:10:0.61:146,0,1	0/0:46,0:14:26.29:0,26,207	0/1:21,0:8:9.25:9,0,26	0/0:34,0:33:67.36:0,67,965	0/0:17,0:16:35.28:0,35,446	0/0:14,0:14:26.92:0,27,312	0/0:26,0:23:56.98:0,57,702	0/0:12,0:11:27.05:0,27,322	1/1:15,2:16:33.82:444,34,0	1/1:10,11:19:16.22:399,16,0	0/0:5,0:4:8.88:0,9,62	0/0:14,0:13:17.96:0,18,164	0/0:19,0:18:8.03:0,8,82	0/0:13,0:13:35.96:0,36,391	0/0:18,0:18:42.92:0,43,476	0/0:16,0:16:42.06:0,42,570	0/0:28,0:28:48.42:0,48,460	0/0:20,0:20:57.03:0,57,664	0/0:29,0:28:72.68:0,73,1044	0/0:13,0:12:20.97:0,21,285	0/0:19,0:19:30.51:0,31,232	0/0:28,0:27:57.75:0,58,536	0/0:13,0:12:32.96:0,33,345	0/1:20,4:23:2.38:505,0,2	0/1:22,0:22:7.85:8,0,600	0/0:23,0:22:54.41:0,54,633	0/0:22,0:22:56.98:0,57,736
chr10	71298312	.	CACACACAT	C	1535.21	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=6.336;DP=665;FS=1.416;HRun=0;HaplotypeScore=151.0248;InbreedingCoeff=0.4201;MQ=52.87;MQ0=22;MQRankSum=-0.220;QD=7.45;ReadPosRankSum=-6.598;VQSLOD=0.0208;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:46,0:46:99:219,0,1146	1/1:4,0:4:11.98:98,12,0	0/0:25,0:7:1.85:0,2,23	0/1:37,0:9:15.92:16,0,29	0/0:23,0:23:37:0,37,1048	0/0:19,0:19:54.09:0,54,1394	0/0:29,0:29:47.59:0,48,1343	0/0:17,0:16:16.96:0,17,270	0/0:23,0:22:47.58:0,48,1399	1/1:0,29:29:62.58:577,63,0	1/1:10,1:11:23.97:252,24,0	0/0:28,0:28:64.14:0,64,1660	0/1:15,0:15:26.95:27,0,83	0/0:21,0:21:19.68:0,20,1345	0/0:24,0:24:54.23:0,54,1393	0/0:24,0:23:14.50:0,15,1516	0/0:27,0:27:55.52:0,56,1485	0/1:21,0:21:23.21:23,0,315	0/0:19,0:15:43.11:0,43,791	0/0:15,0:15:30.42:0,30,685	0/0:65,0:63:64.72:0,65,2753	0/0:36,0:36:62.93:0,63,1916	0/0:16,0:16:3.01:0,3,76	0/1:29,0:28:99:181,0,323	1/1:10,3:12:21:315,21,0	0/0:22,0:22:5.19:0,5,1031	0/0:17,0:17:24.34:0,24,695	0/0:9,0:9:26.90:0,27,462
chr10	71298314	.	C	CAT	689.64	PASS	AB=0.715;AC=7;AF=0.125;AN=56;BaseQRankSum=6.784;DP=656;FS=2.978;HRun=0;HaplotypeScore=94.9541;InbreedingCoeff=0.4565;MQ=53.04;MQ0=19;MQRankSum=3.527;QD=5.30;ReadPosRankSum=0.822;VQSLOD=2.7202;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:47,0:47:97.62:315,0,98	0/0:4,0:4:11.98:0,12,98	0/0:20,0:7:14.93:0,15,139	0/0:38,0:10:25.05:0,25,183	0/0:23,0:23:63.03:0,63,723	0/0:19,0:19:54:0,54,583	0/0:28,0:28:66.01:0,66,745	0/0:15,0:14:41.86:0,42,460	0/0:23,0:22:48.02:0,48,519	0/0:29,0:29:56.85:0,57,413	0/0:11,0:11:20.87:0,21,159	0/0:28,0:28:71.92:0,72,810	0/1:3,12:15:7.88:26,0,8	0/0:22,0:22:59.92:0,60,668	0/0:24,0:24:63.04:0,63,753	0/0:22,0:21:63.07:0,63,736	0/0:27,0:27:74.84:0,75,874	0/1:7,15:23:17.42:17,0,82	0/0:19,0:15:41.61:0,42,407	0/0:15,0:15:33.01:0,33,391	0/0:63,0:61:99:0,126,1254	0/0:35,0:35:89.90:0,90,933	1/1:4,12:16:3:55,3,0	1/1:27,2:28:36.94:409,37,0	0/0:14,0:13:20.84:0,21,161	0/0:21,0:21:32.80:0,33,595	0/0:17,0:17:47.59:0,48,456	0/0:9,0:9:26.94:0,27,275
chr10	71298796	.	CTTGGCAAT	C	8860.29	PASS	AB=0.706;AC=17;AF=0.304;AN=56;BaseQRankSum=16.375;DP=694;FS=7.655;HRun=0;HaplotypeScore=219.6759;InbreedingCoeff=0.9088;MQ=89.55;MQ0=0;MQRankSum=-15.972;QD=49.50;ReadPosRankSum=0.930;VQSLOD=3.7925;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,30:43:82.48:2023,82,0	1/1:3,5:8:12.04:336,12,0	0/0:29,0:29:78.25:0,78,2793	0/0:30,0:30:78.23:0,78,3086	0/0:28,0:28:81.28:0,81,3551	0/0:23,0:23:66.21:0,66,2713	0/0:38,0:38:99:0,111,4804	0/0:40,0:40:99:0,102,4282	0/0:31,0:31:90.31:0,90,3960	1/1:1,13:13:36.12:1007,36,0	1/1:2,14:16:26.92:754,27,0	0/0:27,0:27:78.27:0,78,3393	1/1:7,16:23:57.20:1556,57,0	0/0:14,0:14:36.12:0,36,1583	0/0:38,0:38:99:0,102,4446	0/0:23,0:23:66.23:0,66,2818	0/0:26,0:26:72.25:0,72,3095	1/1:3,13:16:39.13:1078,39,0	0/0:19,0:19:51.18:0,51,2077	0/0:21,0:21:63.22:0,63,2770	0/0:52,0:51:99:0,147,6009	0/0:25,0:25:66.23:0,66,2750	1/1:3,8:13:18.05:444,18,0	0/1:14,10:24:99:657,0,231	1/1:9,13:22:36.04:1006,36,0	0/0:22,0:22:57.20:0,57,2449	0/0:17,0:17:45.15:0,45,1954	0/0:12,0:12:36.12:0,36,1513
chr10	71298816	.	GT	G	6470.36	PASS	AB=0.523;AC=17;AF=0.304;AN=56;BaseQRankSum=18.530;DP=687;FS=3.780;HRun=1;HaplotypeScore=133.1601;InbreedingCoeff=0.9180;MQ=89.43;MQ0=0;MQRankSum=-15.809;QD=34.79;ReadPosRankSum=-0.989;VQSLOD=4.2295;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:44:99:1479,113,0	1/1:0,8:8:18.06:250,18,0	0/0:25,0:25:61.52:0,62,1001	0/0:34,0:34:83.34:0,83,1272	0/0:33,0:33:99:0,99,1557	0/0:28,0:28:81.28:0,81,1284	0/0:33,0:33:99:0,99,1461	0/0:35,0:35:99:0,105,1613	0/0:32,0:32:96.33:0,96,1526	1/1:0,22:20:57.19:786,57,0	1/1:0,16:16:45.13:592,45,0	0/0:26,0:26:78.23:0,78,1179	1/1:0,24:24:66.22:903,66,0	0/0:14,0:14:42.13:0,42,645	0/0:29,0:29:87.24:0,87,1293	0/0:23,0:23:69.22:0,69,1076	0/0:25,0:25:72.19:0,72,1070	1/1:0,19:19:54.13:724,54,0	0/0:15,0:15:45.14:0,45,680	0/0:25,0:25:75.18:0,75,1137	0/0:50,0:50:99:0,150,2339	0/0:25,0:25:75.26:0,75,1188	1/1:0,15:15:39.12:527,39,0	0/1:2,21:23:13.27:639,0,13	1/1:1,14:15:42.13:569,42,0	0/0:22,0:22:66.22:0,66,1035	0/0:17,0:17:51.17:0,51,815	0/0:10,0:10:30.10:0,30,476
chr10	71299660	.	AATCCCCTACCCTT	A	10571.12	PASS	AB=0.809;AC=18;AF=0.321;AN=56;BaseQRankSum=14.839;DP=554;FS=1.328;HRun=0;HaplotypeScore=199.9943;InbreedingCoeff=0.8062;MQ=58.67;MQ0=6;MQRankSum=-13.388;QD=60.41;ReadPosRankSum=0.581;VQSLOD=4.6706;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,16:21:3.16:1140,3,0	1/1:1,7:8:21.07:839,21,0	0/0:25,0:9:27.09:0,27,1476	0/0:34,0:14:39.13:0,39,2161	0/0:20,0:20:60.21:0,60,3872	0/0:20,0:20:57.20:0,57,3427	0/0:16,0:16:42.13:0,42,2423	0/0:19,0:19:54.19:0,54,3251	0/0:29,0:29:87.30:0,87,5437	1/1:7,13:20:36.05:1053,36,0	1/1:2,14:16:42.01:1298,42,0	0/0:19,0:19:54.19:0,54,3332	1/1:4,10:14:27.09:1078,27,0	0/0:19,0:19:51.14:0,51,3075	0/0:22,0:22:66.23:0,66,4266	0/0:16,0:16:48.16:0,48,3043	0/0:30,0:30:87.30:0,87,5570	0/1:6,7:13:35.51:698,0,36	0/0:14,0:14:42.14:0,42,2624	0/0:28,0:28:84.27:0,84,5318	0/0:19,0:19:57.20:0,57,3476	0/0:19,0:19:51.16:0,51,3125	1/1:1,11:12:24.08:959,24,0	1/1:2,11:13:30.10:1117,30,0	1/1:3,25:27:63.22:2356,63,0	0/1:29,1:30:32.56:33,0,5165	0/0:19,0:18:51.18:0,51,3234	0/0:11,0:11:30.10:0,30,1791
chr10	71299858	.	A	AG	7532.87	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=17.565;DP=546;FS=4.683;HRun=0;HaplotypeScore=83.3504;InbreedingCoeff=0.9998;MQ=80.57;MQ0=0;MQRankSum=-2.314;QD=44.05;ReadPosRankSum=3.500;VQSLOD=5.3627;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:69.24:1101,69,0	1/1:0,15:15:42.14:671,42,0	0/0:13,0:13:32.31:0,32,409	0/0:16,0:16:45.13:0,45,547	0/0:25,0:25:75.24:0,75,1034	0/0:20,0:20:60.20:0,60,839	0/0:15,0:15:39.13:0,39,539	0/0:25,0:25:75.24:0,75,1021	0/0:16,0:16:48.14:0,48,641	1/1:2,28:30:84.28:1342,84,0	1/1:0,17:17:45.07:688,45,0	0/0:22,0:22:63.20:0,63,866	1/1:1,16:17:45.15:718,45,0	0/0:21,0:21:63.20:0,63,863	0/0:20,0:20:60.18:0,60,807	0/0:18,0:18:54.18:0,54,755	0/0:20,0:20:57.19:0,57,796	1/1:0,12:12:33.11:526,33,0	0/0:16,0:16:48.14:0,48,653	0/0:31,0:31:93.31:0,93,1300	0/0:17,0:17:48.15:0,48,655	0/0:18,0:18:54.16:0,54,736	1/1:0,15:15:42.14:671,42,0	1/1:0,19:19:57.19:911,57,0	1/1:1,20:21:57.19:905,57,0	0/0:29,0:29:87.27:0,87,1172	0/0:22,0:22:66.22:0,66,920	0/0:11,0:11:33.11:0,33,461
chr10	71301877	.	AAATC	A	6811.40	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.448;DP=482;FS=3.573;HRun=0;HaplotypeScore=89.1324;InbreedingCoeff=0.9809;MQ=59.46;MQ0=9;MQRankSum=-2.317;QD=49.36;ReadPosRankSum=3.628;VQSLOD=5.7890;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:75.21:1527,75,0	1/1:0,4:4:9.03:189,9,0	0/0:30,0:12:16.13:0,16,824	0/0:30,0:18:11.68:0,12,1294	0/0:12,0:12:36.12:0,36,1041	0/0:20,0:20:60.21:0,60,1711	0/0:13,0:13:39.13:0,39,1112	0/0:32,0:32:96.29:0,96,2628	0/0:16,0:16:48.16:0,48,1389	1/1:0,8:8:24.08:503,24,0	1/1:0,10:10:21.07:439,21,0	0/0:12,0:12:36.12:0,36,1043	1/1:0,12:11:30.10:624,30,0	0/0:14,0:14:42.14:0,42,1201	0/0:14,0:14:42.14:0,42,1196	0/0:17,0:17:51.18:0,51,1478	0/0:23,0:23:69.24:0,69,1969	1/1:0,22:22:63.22:1321,63,0	0/0:17,1:18:51.17:0,51,1472	0/0:20,0:20:60.16:0,60,1536	0/0:19,0:19:57.20:0,57,1652	0/0:12,0:12:36.12:0,36,992	1/1:0,12:12:24.08:502,24,0	1/1:0,12:12:30.06:602,30,0	1/1:0,22:22:54.18:1104,54,0	0/0:14,1:14:42.14:0,42,1216	0/0:21,0:21:63.22:0,63,1822	0/0:6,0:6:18.06:0,18,521
chr10	71303494	.	A	ATAATAG	4015.78	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=6.109;DP=485;FS=0.000;HRun=0;HaplotypeScore=97.0056;InbreedingCoeff=0.8765;MQ=60.72;MQ0=0;MQRankSum=-8.614;QD=27.32;ReadPosRankSum=0.333;VQSLOD=3.3534;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,14:30:33.11:1090,33,0	1/1:3,4:7:12.04:396,12,0	0/0:6,0:6:8.89:0,9,66	0/0:7,0:7:8.64:0,9,130	0/0:26,0:26:60.21:0,60,1248	0/0:27,0:27:60.21:0,60,1248	0/0:8,0:8:9.03:0,9,190	0/0:26,0:26:60.17:0,60,1037	0/0:20,0:20:48.12:0,48,898	1/1:8,13:20:33.06:848,33,0	1/1:11,14:24:24:710,24,0	0/0:18,0:18:45.15:0,45,890	1/1:8,0:8:5.91:54,6,0	0/0:15,0:15:33.11:0,33,698	0/0:12,0:12:30.09:0,30,585	0/0:17,0:17:33.07:0,33,527	0/0:41,0:41:99:0,102,2010	1/1:8,0:16:9.03:229,9,0	0/0:14,0:14:27.09:0,27,559	0/0:24,0:24:54.16:0,54,1020	0/0:8,0:8:21.05:0,21,405	0/0:5,0:5:12.02:0,12,180	1/1:7,0:9:3.01:79,3,0	1/1:6,0:6:2.90:16,3,0	1/1:9,14:18:18.06:594,18,0	0/0:23,0:23:60.20:0,60,1211	0/0:21,0:21:51.14:0,51,966	0/0:20,0:20:54.17:0,54,1089
chr10	71304336	.	GA	G	5614.11	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=17.832;DP=583;FS=2.783;HRun=7;HaplotypeScore=88.7958;InbreedingCoeff=0.9989;MQ=84.11;MQ0=0;MQRankSum=-5.706;QD=27.25;ReadPosRankSum=1.594;VQSLOD=5.4408;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,36:41:99:1115,111,0	1/1:0,7:7:21.05:214,21,0	0/0:18,1:19:48.07:0,48,582	0/0:18,0:18:42.12:0,42,501	0/0:16,0:16:42.13:0,42,528	0/0:15,0:15:42.13:0,42,525	0/0:25,0:25:75.20:0,75,906	0/0:21,0:21:54.16:0,54,657	0/0:18,0:18:51.15:0,51,628	1/1:1,33:34:99:995,99,0	1/1:1,22:23:48.10:489,48,0	0/0:24,0:24:72.23:0,72,900	1/1:2,11:13:30.07:306,30,0	0/0:17,0:17:48.15:0,48,604	0/0:14,0:14:42.13:0,42,528	0/0:17,0:17:51.16:0,51,642	0/0:36,0:36:99:0,105,1321	1/1:1,28:29:78.18:796,78,0	0/0:16,0:16:47.93:0,48,567	0/0:23,0:23:66.21:0,66,830	0/0:14,0:14:33.11:0,33,415	0/0:20,0:20:60.19:0,60,748	1/1:0,23:23:69.16:704,69,0	1/1:3,18:21:57.09:573,57,0	1/1:2,13:15:44.96:423,45,0	0/0:18,1:19:23.60:0,24,605	0/0:30,0:30:87.28:0,87,1093	0/0:15,0:15:45.14:0,45,566
chr10	71304349	.	CA	C	2748.64	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.933;DP=607;FS=4.876;HRun=2;HaplotypeScore=100.4979;InbreedingCoeff=0.9907;MQ=86.97;MQ0=0;MQRankSum=-12.063;QD=34.36;ReadPosRankSum=-0.834;VQSLOD=3.2072;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1662	1/1:0,8:8:21.07:272,21,0	0/0:25,0:25:69.08:0,69,909	0/0:19,0:19:52.68:0,53,703	0/0:16,0:16:48.14:0,48,679	0/0:17,0:17:51.17:0,51,764	0/0:29,0:29:84.23:0,84,1179	0/0:21,0:21:57.16:0,57,830	0/0:21,0:21:63.17:0,63,913	1/1:2,32:34:99:1317,102,0	1/1:0,24:24:60.20:776,60,0	0/0:23,0:23:69.23:0,69,1031	0/0:12,0:12:33.11:0,33,481	0/0:18,0:18:54.17:0,54,788	0/0:13,0:13:36.12:0,36,540	0/0:20,0:20:60.20:0,60,898	0/0:39,0:39:99:0,111,1641	0/0:31,0:31:84.28:0,84,1259	0/0:17,0:17:48.15:0,48,699	0/0:26,0:26:72.24:0,72,1079	0/0:13,0:13:39.12:0,39,566	0/0:20,0:20:59.99:0,60,867	0/0:26,0:26:75.25:0,75,1123	0/0:18,0:18:51.17:0,51,764	1/1:0,14:14:42.14:543,42,0	0/0:17,1:18:12.33:0,12,681	0/0:31,0:31:90.29:0,90,1326	0/0:16,0:16:48.16:0,48,719
chr10	71305194	.	C	CTGTG	747.47	PASS	AB=1.000;AC=16;AF=0.320;AN=50;BaseQRankSum=5.791;DP=475;FS=3.929;HRun=0;HaplotypeScore=112.0030;InbreedingCoeff=0.6470;MQ=51.26;MQ0=7;MQRankSum=-4.395;QD=4.89;ReadPosRankSum=-0.632;VQSLOD=2.1510;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:30:56.35:70,0,56	1/1:6,0:6:6.02:88,6,0	./.	./.	0/0:16,0:15:18.05:0,18,249	0/0:15,0:15:12.04:0,12,176	0/0:20,0:21:14.54:0,15,278	0/0:24,0:23:14.09:0,14,148	0/0:15,0:17:8.52:0,9,196	1/1:16,0:15:13.86:174,14,0	./.	0/0:12,0:13:18.04:0,18,242	1/1:12,0:10:8.99:122,9,0	0/0:14,0:14:15.03:0,15,207	0/1:18,0:18:9.68:10,0,202	0/0:16,0:16:15.05:0,15,220	0/0:26,0:26:48.16:0,48,713	1/1:6,7:14:9.01:156,9,0	0/0:18,0:20:18.05:0,18,233	0/0:11,0:11:6.02:0,6,79	0/0:44,0:43:51.11:0,51,704	0/0:10,0:10:21.03:0,21,280	1/1:7,0:7:3.01:48,3,0	1/1:25,1:27:11.88:195,12,0	1/1:17,0:20:3.01:52,3,0	0/0:17,0:18:21.15:0,21,344	0/0:15,0:13:12.03:0,12,169	0/0:9,0:9:15.04:0,15,208
chr10	71305389	.	C	CT	1657.72	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-6.584;DP=617;FS=1.597;HRun=12;HaplotypeScore=70.6040;InbreedingCoeff=0.8945;MQ=71.61;MQ0=2;MQRankSum=-0.440;QD=13.26;ReadPosRankSum=1.302;VQSLOD=4.0148;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,34:46:67.03:675,67,0	0/0:13,0:13:32.74:0,33,233	0/0:22,0:16:10.70:0,11,101	0/0:15,0:13:17.76:0,18,100	0/0:27,0:28:44.08:0,44,462	0/0:20,0:21:44.58:0,45,318	0/0:19,0:19:44.69:0,45,326	0/0:24,0:25:52.44:0,52,361	0/0:20,0:20:53.62:0,54,389	0/0:24,0:24:65.55:0,66,475	0/0:18,0:18:44.64:0,45,322	0/0:19,0:19:32.66:0,33,231	1/1:4,12:17:8.13:237,8,0	0/0:14,0:14:31.73:0,32,254	0/0:16,0:16:43.95:0,44,310	0/0:15,0:15:34.98:0,35,275	0/0:31,0:32:79.49:0,79,572	1/1:5,17:22:23.16:387,23,0	0/0:12,1:12:2.40:0,2,171	0/0:23,0:24:58.66:0,59,418	0/0:6,0:22:32.56:0,33,94	0/0:31,0:31:61.74:0,62,453	1/1:9,10:19:5.60:213,6,0	1/1:5,15:21:17.05:309,17,0	0/0:27,0:27:65.42:0,65,471	0/0:33,0:33:76.99:0,77,546	0/0:27,0:27:68.29:0,68,484	0/0:13,0:13:13.91:0,14,144
chr10	71306160	.	T	TCA	231.02	PASS	AB=1.000;AC=10;AF=0.263;AN=38;BaseQRankSum=-0.138;DP=550;FS=6.569;HRun=0;HaplotypeScore=95.7406;InbreedingCoeff=0.2748;MQ=67.23;MQ0=13;MQRankSum=0.156;QD=1.75;ReadPosRankSum=-0.329;VQSLOD=1.0224;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:14,0:14:5.91:59,6,0	0/1:18,0:17:3.62:4,0,26	0/0:24,0:24:9.12:0,9,95	./.	0/0:18,0:18:2.92:0,3,125	0/0:19,0:19:2.52:0,3,29	0/0:11,0:11:6:0,6,63	0/0:12,0:13:8.86:0,9,77	0/0:21,0:23:5.32:0,5,26	1/1:20,2:21:6.01:87,6,0	1/1:14,4:17:12.04:174,12,0	0/1:16,0:16:15.01:15,0,100	0/0:23,0:25:35.58:0,36,325	0/1:15,0:14:9.93:10,0,48	./.	./.	0/0:25,0:24:3.01:0,3,31	0/0:17,0:17:9.01:0,9,87	./.	0/1:28,0:27:0.01:0,0,0	0/0:16,0:14:3.01:0,3,31	./.	0/0:23,0:22:23.76:0,24,215	0/0:6,0:6:2.84:0,3,31
chr10	71306699	.	G	GA	2241.37	PASS	AB=0.923;AC=19;AF=0.339;AN=56;BaseQRankSum=-6.312;DP=438;FS=7.044;HRun=0;HaplotypeScore=54.5794;InbreedingCoeff=0.8963;MQ=65.17;MQ0=0;MQRankSum=1.027;QD=21.97;ReadPosRankSum=7.036;VQSLOD=4.7609;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:39.13:542,39,0	1/1:0,7:7:17.97:226,18,0	0/0:15,0:12:35.43:0,35,429	0/0:13,0:13:25.68:0,26,313	0/0:11,0:11:24.01:0,24,223	0/0:16,0:16:44.98:0,45,456	0/0:32,0:32:80.80:0,81,738	0/0:7,0:7:14.05:0,14,128	0/0:20,0:20:53.98:0,54,557	1/1:0,7:7:18.06:251,18,0	1/1:0,6:6:9.03:123,9,0	0/0:19,0:19:48.91:0,49,504	1/1:0,10:11:18.06:249,18,0	0/0:27,0:27:62.57:0,63,656	0/0:23,0:23:59.38:0,59,670	0/0:16,0:16:40.36:0,40,436	0/0:34,0:34:93.05:0,93,986	1/1:0,8:8:24.08:335,24,0	0/0:9,0:9:23.95:0,24,237	0/0:10,0:10:27.01:0,27,277	0/0:41,0:41:99:0,101,1137	0/0:13,0:13:33.95:0,34,384	1/1:0,6:6:12.04:167,12,0	1/1:1,13:14:21.06:293,21,0	1/1:0,11:12:18.06:251,18,0	0/1:11,1:12:15.07:15,0,212	0/0:25,0:25:64.86:0,65,710	0/0:5,0:5:14.96:0,15,134
chr10	71307209	.	A	ATCCCC	9894.52	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-4.013;DP=651;FS=1.699;HRun=0;HaplotypeScore=127.9418;InbreedingCoeff=0.9967;MQ=72.58;MQ0=0;MQRankSum=-10.744;QD=62.23;ReadPosRankSum=-0.659;VQSLOD=5.6813;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,16:23:54.14:1506,54,0	1/1:3,4:7:15.05:433,15,0	0/0:23,0:23:57.18:0,57,1082	0/0:20,0:20:51.13:0,51,940	0/0:16,0:16:39.13:0,39,814	0/0:19,0:19:57.20:0,57,1196	0/0:43,0:43:99:0,120,2399	0/0:31,0:31:90.29:0,90,1758	0/0:28,0:28:69.22:0,69,1411	1/1:10,13:23:62.54:1652,63,0	1/1:6,8:14:21.07:648,21,0	0/0:24,0:24:66.23:0,66,1381	1/1:8,11:19:41.63:1158,42,0	0/0:23,0:23:66.21:0,66,1317	0/0:25,0:25:72.25:0,72,1457	0/0:29,0:29:72.23:0,72,1451	0/0:18,0:18:48.14:0,48,967	1/1:3,10:13:36.08:1041,36,0	0/0:29,0:29:75.25:0,75,1486	0/0:13,0:13:36.12:0,36,740	0/0:59,0:59:99:0,157,3196	0/0:25,0:25:72.23:0,72,1427	1/1:3,11:14:33.07:893,33,0	1/1:5,27:32:57.20:1709,57,0	1/1:3,10:13:33.10:853,33,0	0/0:29,0:29:81.27:0,81,1625	0/0:21,0:21:57.19:0,57,1163	0/0:17,0:17:45.11:0,45,874
chr10	71307284	.	C	CTTT	9217.01	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=16.902;DP=637;FS=12.396;HRun=0;HaplotypeScore=128.5842;InbreedingCoeff=0.9116;MQ=68.20;MQ0=4;MQRankSum=-12.257;QD=42.09;ReadPosRankSum=-0.195;VQSLOD=5.4794;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:25:69.24:1495,69,0	1/1:1,7:9:21.07:467,21,0	0/0:27,0:22:44.15:0,44,752	0/1:44,0:36:83.48:83,0,986	0/0:26,0:26:78.27:0,78,1449	0/0:19,0:19:57.20:0,57,1058	0/0:24,0:24:72.25:0,72,1334	0/0:16,0:16:42.12:0,42,679	0/0:24,0:24:72.23:0,72,1277	1/1:6,19:24:66.22:1423,66,0	1/1:6,14:20:42.14:883,42,0	0/0:27,0:27:75.26:0,75,1391	1/1:3,12:16:36.12:806,36,0	0/0:21,0:21:63.22:0,63,1168	0/0:20,0:20:57.20:0,57,1059	0/0:26,0:26:75.24:0,75,1360	0/0:22,0:22:66.23:0,66,1212	1/1:4,11:15:39.05:821,39,0	0/0:20,0:20:57.20:0,57,1046	0/0:18,0:18:48.16:0,48,895	0/0:38,0:38:99:0,102,1862	0/0:23,0:23:69.23:0,69,1239	1/1:4,16:20:60.10:1201,60,0	1/1:7,13:21:48.08:978,48,0	1/1:6,16:22:51.13:1062,51,0	0/0:27,2:29:9.35:0,9,1338	0/0:16,0:16:44.96:0,45,829	0/0:22,0:22:63.21:0,63,1136
chr10	71307463	.	AG	A	4531.33	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=16.269;DP=541;FS=0.000;HRun=1;HaplotypeScore=77.6071;InbreedingCoeff=0.9957;MQ=74.28;MQ0=0;MQRankSum=-6.282;QD=27.46;ReadPosRankSum=2.535;VQSLOD=4.6990;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:53.90:671,54,0	1/1:1,10:11:30.55:343,31,0	0/0:21,0:20:60.06:0,60,823	0/0:16,0:16:38.90:0,39,601	0/0:13,0:13:39.13:0,39,621	0/0:15,0:15:45.15:0,45,717	0/0:29,0:29:84.29:0,84,1342	0/0:18,0:18:54.17:0,54,819	0/0:20,0:20:57.17:0,57,883	1/1:2,18:20:53.01:613,53,0	1/1:1,9:10:12.92:149,13,0	0/0:18,0:18:51.17:0,51,814	1/1:0,14:14:30.09:359,30,0	0/0:12,0:12:36.12:0,36,576	0/0:14,0:14:42.14:0,42,672	0/0:11,0:11:33.11:0,33,528	0/0:35,0:35:99:0,105,1667	1/1:2,29:31:55.47:883,55,0	0/0:18,0:18:54.17:0,54,839	0/0:26,0:26:75.26:0,75,1197	0/0:32,0:32:96.28:0,96,1462	0/0:16,0:16:48.16:0,48,767	1/1:2,14:16:31.86:348,32,0	1/1:1,19:20:54.12:620,54,0	1/1:0,19:19:46.49:548,46,0	0/0:32,1:33:60.39:0,60,1428	0/0:16,0:16:45.12:0,45,692	0/0:13,0:13:36.12:0,36,576
chr10	71307652	.	C	CAT	8466.91	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=16.976;DP=612;FS=9.755;HRun=0;HaplotypeScore=102.9126;InbreedingCoeff=0.9991;MQ=77.44;MQ0=0;MQRankSum=-7.562;QD=44.80;ReadPosRankSum=0.533;VQSLOD=5.6107;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,37:41:99:1962,105,0	1/1:1,6:8:21.07:392,21,0	0/0:21,0:20:52.35:0,52,672	0/0:24,0:24:72.15:0,72,998	0/0:23,0:23:69.23:0,69,1012	0/0:21,0:21:63.17:0,63,885	0/0:20,0:20:57.18:0,57,820	0/0:33,0:33:99:0,99,1422	0/0:21,0:21:63.21:0,63,928	1/1:4,25:31:87.28:1594,87,0	1/1:5,11:16:30.10:560,30,0	0/0:21,0:21:60.19:0,60,862	1/1:4,22:27:65.91:1233,66,0	0/0:24,0:24:72.22:0,72,1019	0/0:24,0:24:72.22:0,72,1021	0/0:16,0:16:45.14:0,45,642	0/0:26,0:26:75.25:0,75,1100	1/1:2,12:14:30.10:561,30,0	0/0:24,0:24:69.21:0,69,964	0/0:16,0:16:48.13:0,48,666	0/0:43,0:43:99:0,123,1769	0/0:15,0:15:45.15:0,45,662	1/1:1,19:20:42.04:784,42,0	1/1:3,11:14:33.11:597,33,0	1/1:2,16:18:42.14:785,42,0	0/0:25,0:25:72.24:0,72,1060	0/0:13,0:13:39.13:0,39,574	0/0:13,0:13:39.13:0,39,574
chr10	71308163	.	TG	T	560.43	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.614;DP=672;FS=6.872;HRun=1;HaplotypeScore=78.3512;InbreedingCoeff=0.9968;MQ=92.77;MQ0=0;MQRankSum=-6.574;QD=8.90;ReadPosRankSum=-0.872;VQSLOD=0.5690;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.28:0,81,1292	0/0:12,0:12:36.12:0,36,575	0/0:41,0:41:99:0,120,1891	0/0:29,0:29:87.29:0,87,1357	0/0:28,0:28:84.18:0,84,1273	0/0:21,0:21:63.21:0,63,1007	0/0:16,0:16:48.15:0,48,741	0/0:26,0:26:78.26:0,78,1213	0/0:26,0:26:78.27:0,78,1237	0/0:24,0:24:72.24:0,72,1124	0/0:30,0:30:87.30:0,87,1388	0/0:20,0:20:60.20:0,60,959	1/1:7,5:12:26.58:162,27,0	0/0:19,0:19:57.17:0,57,862	0/0:21,0:21:63.20:0,63,984	0/0:26,0:26:78.24:0,78,1202	0/0:22,0:22:60.20:0,60,956	1/1:10,4:14:25.66:196,26,0	0/0:36,0:36:99:0,102,1591	0/0:35,0:35:99:0,105,1609	0/0:26,0:26:75.22:0,75,1152	0/0:23,0:23:69.24:0,69,1097	1/1:7,18:25:44.68:242,45,0	1/1:6,6:12:17.77:119,18,0	0/0:21,0:21:60.20:0,60,959	0/0:27,0:27:81.28:0,81,1293	0/0:34,0:34:99:0,102,1630	0/0:19,0:19:57.19:0,57,905
chr10	71308166	.	G	GC	884.38	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.859;DP=677;FS=6.078;HRun=0;HaplotypeScore=82.0476;InbreedingCoeff=0.9984;MQ=91.64;MQ0=0;MQRankSum=-7.164;QD=13.61;ReadPosRankSum=-1.186;VQSLOD=4.4645;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.27:0,81,1133	0/0:12,0:12:36.12:0,36,504	0/0:41,0:41:99:0,120,1656	0/0:30,0:30:84.27:0,84,1137	0/0:27,0:27:81.27:0,81,1132	0/0:22,0:22:66.20:0,66,905	0/0:16,0:16:48.16:0,48,671	0/0:22,0:22:66.21:0,66,909	0/0:26,0:26:78.25:0,78,1073	0/0:24,0:24:72.24:0,72,1007	0/0:32,0:32:90.28:0,90,1241	0/0:22,0:22:66.19:0,66,884	1/1:8,5:13:34.11:246,34,0	0/0:19,0:19:57.19:0,57,796	0/0:20,0:20:60.20:0,60,839	0/0:24,0:24:72.24:0,72,1006	0/0:23,0:23:63.18:0,63,859	1/1:10,4:14:23.71:206,24,0	0/0:38,0:38:99:0,108,1456	0/0:35,0:35:99:0,102,1389	0/0:24,0:24:69.23:0,69,965	0/0:23,0:23:69.23:0,69,965	1/1:8,18:26:64.90:426,65,0	1/1:6,6:12:21.93:166,22,0	0/0:21,0:21:60.20:0,60,839	0/0:30,0:30:84.28:0,84,1175	0/0:35,0:35:99:0,102,1426	0/0:19,0:19:57.19:0,57,797
chr10	71308233	.	T	TCTTAATAGTTGTGTTAGAAA	11144.82	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.093;DP=622;FS=1.149;HRun=0;HaplotypeScore=312.6670;InbreedingCoeff=0.9954;MQ=78.91;MQ0=0;MQRankSum=-11.287;QD=185.75;ReadPosRankSum=0.529;VQSLOD=4.5020;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,5070	0/0:7,0:7:21.05:0,21,684	0/0:29,0:29:84.22:0,84,3174	0/0:23,0:23:36.07:0,36,1718	0/0:21,0:21:63.22:0,63,3410	0/0:29,0:29:84.29:0,84,4113	0/0:18,0:18:51.14:0,51,2349	0/0:25,0:25:69.23:0,69,3210	0/0:17,0:17:51.16:0,51,2521	0/0:18,0:18:48.16:0,48,2578	0/0:23,0:23:66.23:0,66,3583	0/0:17,0:17:48.16:0,48,2450	1/1:10,8:19:51.65:4302,52,0	0/0:18,0:18:48.16:0,48,2530	0/0:25,0:25:69.22:0,69,3225	0/0:24,0:24:66.23:0,66,3450	0/0:21,0:21:57.18:0,57,2900	1/1:7,4:11:18.06:1522,18,0	0/0:25,0:25:75.26:0,75,3343	0/0:20,0:20:60.21:0,60,3094	0/0:28,0:28:84.29:0,84,3922	0/0:25,0:25:72.23:0,72,3346	1/1:16,4:21:57.07:3709,57,0	1/1:7,2:9:21.07:1612,21,0	0/0:31,0:31:90.31:0,90,4644	0/0:30,0:30:81.28:0,81,4365	0/0:37,0:37:99:0,111,5691	0/0:15,0:15:39.12:0,39,1810
chr10	71308372	.	T	TA	1784.73	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.792;DP=524;FS=1.204;HRun=1;HaplotypeScore=56.0689;InbreedingCoeff=0.9344;MQ=75.63;MQ0=0;MQRankSum=-3.960;QD=32.45;ReadPosRankSum=0.710;VQSLOD=3.2639;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:58.43:0,58,741	0/0:10,0:10:30.10:0,30,389	0/0:13,0:13:39.12:0,39,491	0/0:11,0:11:0.70:0,1,243	0/0:25,0:25:59.25:0,59,918	0/0:18,0:18:54.13:0,54,658	0/0:17,0:17:51.16:0,51,647	0/0:35,0:35:93.28:0,93,1176	0/0:9,0:9:24.08:0,24,311	0/0:24,0:24:72.21:0,72,894	0/0:22,0:22:66.21:0,66,850	0/0:14,0:14:42.14:0,42,545	1/1:2,7:9:27.08:376,27,0	0/0:19,0:19:57.13:0,57,681	0/0:22,0:22:63.18:0,63,800	0/0:18,0:18:54.18:0,54,700	0/0:12,0:12:36.07:0,36,423	1/1:3,9:12:33.08:445,33,0	0/0:11,0:11:30.10:0,30,388	0/0:32,0:32:96.30:0,96,1231	0/0:21,0:21:63.20:0,63,816	0/0:21,0:21:63.20:0,63,807	1/1:0,15:16:30.10:449,30,0	1/1:2,16:18:45.15:674,45,0	0/0:19,0:19:54.13:0,54,701	0/0:32,0:32:96.26:0,96,1181	0/0:32,0:32:96.30:0,96,1230	0/0:10,0:10:27.09:0,27,350
chr10	71308455	.	G	GTGA	765.54	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.581;DP=570;FS=8.056;HRun=0;HaplotypeScore=84.2252;InbreedingCoeff=0.9810;MQ=74.99;MQ0=0;MQRankSum=-1.254;QD=47.85;ReadPosRankSum=1.175;VQSLOD=5.7259;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:39.13:860,39,0	0/0:12,0:12:36.12:0,36,579	0/0:16,0:16:33.09:0,33,495	0/0:8,0:8:23.75:0,24,323	0/0:29,0:29:81.28:0,81,1302	0/0:28,0:28:84.29:0,84,1340	0/0:17,0:17:48.16:0,48,771	0/0:40,0:40:99:0,102,1626	0/0:21,0:21:57.19:0,57,914	0/0:31,0:31:90.31:0,90,1428	0/0:28,0:28:69.15:0,69,988	0/0:15,0:15:42.14:0,42,675	0/0:12,0:12:30.10:0,30,481	0/0:14,0:14:39.13:0,39,627	0/0:21,0:21:60.19:0,60,939	0/0:18,0:18:48.15:0,48,748	0/0:18,0:18:51.17:0,51,819	0/0:19,0:19:45.15:0,45,723	0/0:16,0:16:48.16:0,48,748	0/0:26,0:26:75.23:0,75,1151	0/0:6,0:6:18.05:0,18,264	0/0:18,0:18:48.15:0,48,740	0/0:25,0:25:69.19:0,69,1070	0/0:8,0:8:18.02:0,18,255	0/0:29,0:29:81.28:0,81,1302	0/0:30,0:30:78.27:0,78,1252	0/0:33,0:33:84.24:0,84,1295	0/0:16,0:16:48.10:0,48,716
chr10	71308469	.	A	AT	1932.99	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.236;DP=561;FS=1.114;HRun=5;HaplotypeScore=57.5329;InbreedingCoeff=0.9514;MQ=75.14;MQ0=0;MQRankSum=-4.205;QD=29.74;ReadPosRankSum=-0.085;VQSLOD=3.9478;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:36.09:0,36,387	0/0:11,0:11:33.06:0,33,346	0/0:13,0:13:36.07:0,36,377	0/0:11,0:11:3.80:0,4,244	0/0:31,0:31:90.21:0,90,958	0/0:30,0:30:81.18:0,81,862	0/0:18,0:18:45.11:0,45,484	0/0:30,0:30:87.20:0,87,923	0/0:22,0:22:60.15:0,60,645	0/0:29,0:29:87.22:0,87,934	0/0:25,0:25:72.18:0,72,774	0/0:16,0:16:48.12:0,48,516	1/1:2,11:13:30.10:394,30,0	0/0:12,0:12:33.08:0,33,355	0/0:21,0:21:60.15:0,60,645	0/0:20,0:20:57.14:0,57,613	0/0:22,0:22:54.13:0,54,580	1/1:4,16:20:39.13:513,39,0	0/0:18,0:18:48.12:0,48,516	0/0:32,0:32:90.22:0,90,967	0/0:6,0:6:18.05:0,18,193	0/0:20,0:20:60.13:0,60,636	1/1:0,25:25:75.24:986,75,0	1/1:2,5:7:15.05:197,15,0	0/0:28,0:28:84.21:0,84,903	0/0:27,0:27:75.18:0,75,799	0/0:26,0:26:78.20:0,78,838	0/0:15,0:15:39.10:0,39,419
chr10	71310194	.	AGGGGCTGGGG	A	292.22	PASS	AC=14;AF=0.269;AN=52;BaseQRankSum=2.720;DP=356;FS=1.189;HRun=0;HaplotypeScore=107.9529;InbreedingCoeff=0.7933;MQ=72.28;MQ0=10;MQRankSum=1.827;QD=17.19;ReadPosRankSum=-5.097;VQSLOD=0.5702;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:3:2.97:20,3,0	./.	0/0:12,0:12:36.12:0,36,1853	0/0:17,0:15:42.14:0,42,2073	0/0:15,0:15:36.12:0,36,1900	0/0:10,0:10:30.10:0,30,1617	0/0:21,0:21:57.20:0,57,3060	0/0:25,0:24:69.24:0,69,3472	0/0:21,0:21:60.21:0,60,3193	1/1:0,5:5:15.04:211,15,0	1/1:1,0:1:3:25,3,0	0/0:11,0:11:30.10:0,30,1600	1/1:1,0:1:3.01:50,3,0	0/0:10,0:10:30.10:0,30,1629	0/0:20,0:20:54.17:0,54,2633	0/0:17,0:16:48.16:0,48,2546	0/0:37,0:35:99:0,105,5518	1/1:3,0:2:6.01:73,6,0	0/0:22,0:21:63.22:0,63,3290	0/0:14,0:14:42.14:0,42,2276	0/0:31,0:29:72.16:0,72,3511	0/0:12,0:12:27.09:0,27,1461	./.	1/1:2,0:1:2.97:20,3,0	1/1:1,0:1:3.01:48,3,0	0/0:18,0:16:45.15:0,45,2485	0/0:19,0:19:57.20:0,57,3002	0/0:7,0:7:18.06:0,18,904
chr10	71310446	.	TTG	T	1324.19	PASS	AB=0.946;AC=17;AF=0.315;AN=54;BaseQRankSum=6.587;DP=658;FS=4.017;HRun=0;HaplotypeScore=107.5150;InbreedingCoeff=0.1833;MQ=59.80;MQ0=3;MQRankSum=-0.278;QD=4.65;ReadPosRankSum=2.002;VQSLOD=2.7049;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:32:6.84:0,7,51	0/0:4,0:11:8.87:0,9,67	./.	0/0:23,0:17:0:0,0,0	0/1:12,0:12:6.87:7,0,192	0/1:20,2:22:32.46:32,0,370	0/0:27,0:27:17.34:0,17,638	0/1:40,0:40:76.29:76,0,485	0/1:29,2:31:10.18:10,0,600	0/0:24,0:41:41.06:0,41,270	0/0:8,0:25:10.77:0,11,70	0/1:19,2:21:34.68:35,0,248	1/1:9,17:28:40.94:414,41,0	0/0:26,0:26:24.50:0,25,522	0/0:18,0:18:30.57:0,31,457	0/1:18,3:21:64.67:65,0,466	0/0:32,2:35:7.58:0,8,864	1/1:8,3:12:12.75:117,13,0	0/1:15,0:15:14.43:14,0,163	0/0:10,0:10:21.05:0,21,283	0/0:50,0:50:30.98:0,31,1066	0/0:8,0:8:12.04:0,12,183	1/1:11,11:22:15.02:168,15,0	1/1:7,18:28:47.59:466,48,0	0/0:7,0:25:6.47:0,6,52	0/1:20,4:25:70.68:71,0,362	0/0:17,0:17:29.98:0,30,347	0/1:7,0:7:21.60:22,0,111
chr10	71316820	.	TG	T	1385.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.315;DP=626;FS=10.165;HRun=2;HaplotypeScore=60.2796;InbreedingCoeff=0.9755;MQ=60.80;MQ0=2;MQRankSum=1.764;QD=33.78;ReadPosRankSum=0.454;VQSLOD=3.1785;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:41:99:1480,114,0	0/0:11,0:11:33.11:0,33,494	0/0:16,0:13:26.98:0,27,338	0/0:16,0:14:13.25:0,13,356	0/0:25,0:25:66.22:0,66,986	0/0:25,0:25:75.25:0,75,1123	0/0:12,0:12:36.12:0,36,540	0/0:32,0:32:96.30:0,96,1399	0/0:12,0:12:36.12:0,36,539	0/0:21,0:21:57.19:0,57,854	0/0:20,0:20:54.17:0,54,776	0/0:21,0:21:63.21:0,63,942	0/0:23,0:23:69.23:0,69,1025	0/0:28,0:28:81.26:0,81,1194	0/0:23,0:23:69.23:0,69,1032	0/0:24,0:24:72.24:0,72,1078	0/0:25,0:25:75.21:0,75,1098	0/0:13,0:13:39.13:0,39,584	0/0:24,0:23:63.21:0,63,944	0/0:24,0:24:72.16:0,72,1049	0/0:41,0:41:99:0,120,1776	0/0:25,0:25:69.23:0,69,1033	0/0:16,0:16:48.16:0,48,718	0/0:22,0:22:47.86:0,48,719	0/0:19,0:19:45.15:0,45,674	0/0:21,0:21:63.21:0,63,944	0/0:25,0:25:72.24:0,72,1076	0/0:21,0:21:63.20:0,63,922
chr10	71317443	.	GTTGC	G	2744.38	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.300;DP=617;FS=7.351;HRun=0;HaplotypeScore=109.3882;InbreedingCoeff=0.9980;MQ=80.53;MQ0=0;MQRankSum=-11.477;QD=51.78;ReadPosRankSum=2.478;VQSLOD=4.9513;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.33:0,96,2689	1/1:1,7:8:24.08:464,24,0	0/0:16,0:16:48.16:0,48,1272	0/0:25,0:25:72.25:0,72,1928	0/0:13,0:13:39.12:0,39,1063	0/0:13,0:13:39.13:0,39,1129	0/0:35,0:35:99:0,105,2820	0/0:21,0:21:63.21:0,63,1765	0/0:26,0:26:75.24:0,75,2102	1/1:1,22:22:63.22:1221,63,0	1/1:0,12:12:32.95:639,33,0	0/0:27,0:27:81.27:0,81,2289	0/0:20,0:20:60.21:0,60,1651	0/0:23,0:23:66.21:0,66,1842	0/0:19,0:19:54.19:0,54,1565	0/0:24,0:24:72.25:0,72,2061	0/0:34,0:33:99:0,99,2761	0/0:26,0:26:75.26:0,75,2136	0/0:31,0:31:93.29:0,93,2396	0/0:11,0:11:33.11:0,33,955	0/0:52,0:52:99:0,148,4230	0/0:21,0:21:63.22:0,63,1779	0/0:28,0:28:78.27:0,78,2155	0/0:30,0:30:90.31:0,90,2585	1/1:0,10:10:30.10:581,30,0	0/0:15,0:15:42.14:0,42,1181	0/0:15,0:15:45.15:0,45,1281	0/0:7,0:7:21.07:0,21,608
chr10	71317909	.	GT	G	739.61	PASS	AB=0.924;AC=4;AF=0.071;AN=56;BaseQRankSum=7.126;DP=584;FS=0.608;HRun=10;HaplotypeScore=57.1094;InbreedingCoeff=0.5616;MQ=64.58;MQ0=1;MQRankSum=1.696;QD=12.12;ReadPosRankSum=1.698;VQSLOD=3.1337;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:95.98:833,96,0	0/0:9,0:9:27.07:0,27,299	0/1:17,1:13:2.07:2,0,186	0/0:15,0:12:17.88:0,18,173	0/0:22,0:22:51.11:0,51,548	0/0:18,0:18:37.49:0,37,522	0/1:8,1:8:1.99:2,0,208	0/0:34,0:33:77.18:0,77,807	0/0:12,0:12:32.96:0,33,331	0/0:28,0:29:74.95:0,75,793	0/0:37,0:36:96.25:0,96,1054	0/0:15,0:15:45.11:0,45,489	0/0:15,1:16:19.06:0,19,431	0/0:12,2:14:10.03:0,10,327	0/0:17,0:17:51.14:0,51,564	0/0:15,0:15:42.11:0,42,457	0/0:13,1:14:13.05:0,13,372	0/0:17,0:17:48.02:0,48,495	0/0:24,0:26:68.79:0,69,687	0/0:34,0:34:99:0,99,1079	0/0:13,0:13:27.07:0,27,299	0/0:24,0:24:63.16:0,63,689	0/0:23,0:23:63.13:0,63,684	0/0:20,0:20:38.13:0,38,441	0/0:19,0:19:54.15:0,54,597	0/0:28,1:29:52.13:0,52,768	0/0:30,0:30:78.20:0,78,855	0/0:21,0:21:51.14:0,51,563
chr10	71318402	.	CT	C	2676.58	PASS	AB=0.924;AC=21;AF=0.375;AN=56;BaseQRankSum=10.328;DP=536;FS=1.707;HRun=12;HaplotypeScore=71.5291;InbreedingCoeff=0.7341;MQ=81.94;MQ0=1;MQRankSum=0.287;QD=10.62;ReadPosRankSum=1.744;VQSLOD=3.3569;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,32:41:83.65:650,84,0	1/1:0,6:6:14.89:111,15,0	0/1:32,1:26:23.97:24,0,128	0/1:26,2:21:15.61:16,0,151	0/0:23,0:23:60.08:0,60,588	0/0:17,1:19:9.33:0,9,425	0/1:14,2:17:4.57:5,0,302	0/0:24,3:27:8:0,8,513	0/0:22,1:23:30.78:0,31,469	1/1:4,17:21:53.16:402,53,0	1/1:3,13:16:35.76:271,36,0	0/0:9,0:9:24.05:0,24,243	1/1:0,15:15:38.81:297,39,0	0/0:10,0:10:30.05:0,30,298	0/0:13,0:13:24.05:0,24,241	0/0:9,0:9:23.95:0,24,230	0/0:27,3:30:48.88:0,49,665	1/1:3,17:20:22.40:343,22,0	0/0:23,0:23:39.08:0,39,396	0/0:23,1:24:26.78:0,27,397	0/0:6,0:6:6.01:0,6,61	0/0:12,1:13:3.85:0,4,214	1/1:5,18:23:35.83:279,36,0	1/1:1,8:9:17.93:139,18,0	1/1:1,19:22:48.70:350,49,0	0/0:8,0:10:26.72:0,27,242	0/0:27,0:26:62.97:0,63,610	0/0:18,0:18:42.08:0,42,426
chr10	71320040	.	T	TCA	33.08	PASS	AC=2;AF=0.045;AN=44;BaseQRankSum=2.282;DP=427;FS=0.000;HRun=0;HaplotypeScore=49.5090;InbreedingCoeff=0.3341;MQ=22.51;MQ0=225;MQRankSum=-1.087;QD=3.01;ReadPosRankSum=-0.370;VQSLOD=1.1456;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,8:6:6.02:112,6,0	0/0:7,0:7:18.03:0,18,241	./.	./.	0/0:13,0:12:14.96:0,15,172	0/0:15,0:11:6.02:0,6,88	./.	./.	0/0:16,0:8:2.97:0,3,20	0/0:14,0:13:33.09:0,33,484	0/0:16,0:16:21.03:0,21,284	0/0:15,0:8:9.03:0,9,132	0/0:18,0:9:15.01:0,15,196	0/0:10,0:6:6.02:0,6,75	0/0:13,0:6:9.03:0,9,132	0/0:15,0:9:18.03:0,18,232	0/0:26,0:5:3.01:0,3,35	./.	0/0:9,0:1:2.99:0,3,23	0/0:13,0:13:33.03:0,33,436	./.	0/0:16,0:16:15:0,15,183	0/0:17,0:17:11.83:0,12,128	0/0:21,0:3:5.98:0,6,64	0/0:6,0:6:8.99:0,9,108	0/0:23,0:15:45.15:0,45,657	0/0:10,0:9:14.95:0,15,171	0/0:5,0:4:9.03:0,9,123
chr10	71322273	.	CTGT	C	427.68	PASS	AB=0.953;AC=13;AF=0.232;AN=56;BaseQRankSum=3.310;DP=442;FS=7.968;HRun=0;HaplotypeScore=65.9877;InbreedingCoeff=0.4102;MQ=58.71;MQ0=2;MQRankSum=1.092;QD=4.36;ReadPosRankSum=0.149;VQSLOD=0.7485;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:37:55.39:55,0,295	1/1:4,0:4:2.98:21,3,0	0/0:25,0:20:16.20:0,16,161	0/0:22,0:17:13.34:0,13,188	0/0:15,0:14:20.89:0,21,159	0/0:14,0:14:30:0,30,295	0/0:20,0:20:44.91:0,45,603	0/0:19,0:19:32.99:0,33,296	0/0:15,0:15:33.07:0,33,488	0/1:9,4:13:6.21:84,0,6	1/1:5,0:5:5.93:44,6,0	0/0:15,0:15:3.05:0,3,314	0/1:13,0:13:28.43:161,0,28	0/0:15,0:15:24.04:0,24,350	0/0:23,0:23:54.09:0,54,756	0/0:18,0:18:39.06:0,39,517	0/0:21,0:20:44.93:0,45,599	0/1:6,0:6:17.99:22,0,18	0/0:12,0:12:15.02:0,15,170	0/0:17,0:17:32.85:0,33,295	0/0:31,0:31:56.98:0,57,696	0/0:20,0:20:47.89:0,48,490	1/1:7,0:7:8.94:70,9,0	1/1:7,0:7:14.96:121,15,0	0/1:6,0:6:11.98:12,0,18	0/0:13,0:13:23.96:0,24,301	0/0:16,0:16:30.09:0,30,540	0/0:13,0:13:15:0,15,214
chr10	71330018	.	CAAAA	C	1345.47	PASS	AB=0.834;AC=13;AF=0.232;AN=56;BaseQRankSum=8.617;DP=372;FS=27.962;HRun=16;HaplotypeScore=74.2927;InbreedingCoeff=0.5507;MQ=56.56;MQ0=8;MQRankSum=-4.874;QD=14.16;ReadPosRankSum=2.777;VQSLOD=-0.6498;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:12:24.35:58,0,24	1/1:0,3:3:9.03:118,9,0	0/0:27,0:7:3.67:0,4,53	0/0:31,0:4:1.21:0,1,30	0/0:18,0:22:46.39:0,46,782	0/0:16,0:16:36.07:0,36,643	0/0:6,0:7:18.06:0,18,343	0/0:22,0:20:39.89:0,40,604	0/0:6,0:9:18.05:0,18,247	1/1:3,8:10:26.59:347,27,0	1/1:6,11:17:45.04:579,45,0	0/0:8,0:8:15.05:0,15,304	0/0:4,0:4:1.09:0,1,16	0/0:9,0:7:12:0,12,188	0/0:11,0:12:33.10:0,33,669	0/0:12,0:13:27.09:0,27,493	0/0:8,0:11:24.08:0,24,362	0/1:10,0:11:31.15:42,0,31	0/0:14,0:15:31.35:0,31,452	0/0:12,0:12:33.01:0,33,480	0/0:2,0:5:6.02:0,6,74	0/0:3,0:4:12.04:0,12,177	1/1:2,0:9:3.63:9,4,0	0/0:1,0:5:0:0,0,0	1/1:4,8:12:27.09:354,27,0	0/1:15,1:17:1.07:1,0,585	0/0:16,0:19:51.07:0,51,886	0/0:16,0:16:40.22:0,40,627
chr10	71330024	.	A	AC	197.39	PASS	AB=0.977;AC=7;AF=0.125;AN=56;BaseQRankSum=7.332;DP=432;FS=2.451;HRun=0;HaplotypeScore=72.2982;InbreedingCoeff=0.6632;MQ=52.94;MQ0=18;MQRankSum=-4.721;QD=2.35;ReadPosRankSum=3.510;VQSLOD=2.1504;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:15:26.77:0,27,205	0/0:4,0:3:0.78:0,1,3	0/1:42,0:8:13.32:13,0,66	0/0:44,1:5:5.75:0,6,31	0/0:23,0:23:60.25:0,60,557	0/0:15,0:15:39.06:0,39,471	0/0:7,0:6:16.55:0,17,176	0/0:28,0:25:62.78:0,63,604	0/0:10,0:9:10.91:0,11,133	1/1:10,1:10:16.24:101,16,0	1/1:15,3:18:17.73:182,18,0	0/0:8,0:8:17.06:0,17,193	0/0:5,0:5:8.97:0,9,74	0/0:10,0:8:14.83:0,15,138	0/0:12,0:12:33.08:0,33,390	0/0:16,0:15:30.02:0,30,311	0/0:14,0:13:29.81:0,30,267	0/0:17,0:13:32.86:0,33,271	0/0:17,0:12:27.65:0,28,298	0/0:12,0:12:32.22:0,32,330	0/0:5,0:5:9:0,9,80	0/0:4,0:4:10.27:0,10,110	0/0:12,0:11:20.87:0,21,154	0/0:6,0:6:5.85:0,6,52	1/1:8,4:12:6.78:38,7,0	0/0:18,0:18:45.62:0,46,478	0/0:22,0:22:54.07:0,54,538	0/0:18,0:18:44.50:0,45,470
chr10	71330040	.	CAAAA	C	1803.04	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.000;DP=494;FS=23.747;HRun=14;HaplotypeScore=91.5082;InbreedingCoeff=0.8871;MQ=47.71;MQ0=26;MQRankSum=-6.044;QD=29.56;ReadPosRankSum=3.107;VQSLOD=0.8233;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:15:26.01:0,26,141	1/1:8,3:10:30.10:410,30,0	0/0:46,0:5:9.47:0,9,107	0/0:55,0:10:7.08:0,7,49	0/0:24,0:24:65.91:0,66,852	0/0:17,0:17:36.10:0,36,591	0/0:10,0:9:27.06:0,27,480	0/0:30,0:30:62.36:0,62,828	0/0:13,0:12:23.91:0,24,297	1/1:3,14:16:45.11:582,45,0	1/1:6,14:20:39.67:559,40,0	0/0:10,0:10:27.09:0,27,494	0/0:5,0:5:9.01:0,9,91	0/0:10,0:9:12.04:0,12,224	0/0:12,0:12:27.08:0,27,471	0/0:19,0:19:36.10:0,36,585	0/0:18,0:17:38.21:0,38,538	0/0:20,0:14:35.91:0,36,421	0/0:24,0:19:45.08:0,45,601	0/0:9,0:9:24.69:0,25,342	0/0:5,0:5:9.03:0,9,145	0/0:7,0:7:18.53:0,19,299	0/0:13,0:13:23.69:0,24,242	0/0:8,0:8:11.23:0,11,93	1/1:5,8:13:29.98:411,30,0	0/0:17,1:19:6.52:0,7,546	0/0:20,0:20:50.34:0,50,765	0/0:12,0:12:24.04:0,24,368
chr10	71330044	.	A	AC	574.09	PASS	AB=0.949;AC=7;AF=0.125;AN=56;BaseQRankSum=6.392;DP=505;FS=16.816;HRun=0;HaplotypeScore=77.9325;InbreedingCoeff=0.5512;MQ=49.29;MQ0=26;MQRankSum=-6.113;QD=5.08;ReadPosRankSum=5.407;VQSLOD=1.6756;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:15:16.04:0,16,219	1/1:4,7:10:26.85:263,27,0	0/0:48,0:7:12.36:0,12,101	0/1:54,0:10:2.46:2,0,89	0/0:26,0:25:71.71:0,72,660	0/0:17,0:17:39.55:0,40,440	0/0:10,0:9:27.06:0,27,304	0/0:35,0:34:80.71:0,81,767	0/0:13,0:12:26.91:0,27,249	0/1:16,2:17:5.44:208,0,5	0/1:17,1:18:56.33:132,0,56	0/0:9,0:9:26.92:0,27,292	0/0:5,0:5:9.01:0,9,90	0/0:9,0:7:14.93:0,15,139	0/0:13,0:13:29.90:0,30,294	0/0:21,0:20:39.69:0,40,383	0/0:17,0:16:18.72:0,19,373	0/0:21,0:15:42:0,42,431	0/0:27,0:20:56.68:0,57,539	0/0:10,0:10:27.03:0,27,278	0/0:5,0:5:9.03:0,9,118	0/0:8,0:8:23.97:0,24,256	0/0:14,0:14:30.40:0,30,300	0/0:9,0:9:14.23:0,14,118	1/1:11,1:12:18.36:104,18,0	0/0:21,0:20:49.67:0,50,525	0/0:22,0:22:49.77:0,50,466	0/0:12,0:12:29.97:0,30,290
chr10	71336084	.	AG	A	3606.66	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.874;DP=619;FS=0.795;HRun=6;HaplotypeScore=75.0149;InbreedingCoeff=0.9829;MQ=77.72;MQ0=0;MQRankSum=0.003;QD=26.72;ReadPosRankSum=2.562;VQSLOD=4.2404;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,41:46:99:1160,108,0	0/0:5,0:5:15.05:0,15,197	0/0:21,0:21:37.93:0,38,561	0/0:26,0:23:53.60:0,54,649	0/0:23,0:23:66.19:0,66,840	0/0:25,0:25:66.19:0,66,839	0/0:24,0:24:69.21:0,69,888	0/0:20,0:20:51.16:0,51,659	0/0:25,0:25:60.18:0,60,768	0/0:20,0:20:57.19:0,57,748	0/0:15,0:15:45.15:0,45,590	0/0:20,0:20:60.19:0,60,771	1/1:1,18:19:48.12:516,48,0	0/0:16,0:16:45.14:0,45,576	0/0:22,0:22:66.21:0,66,868	0/0:17,0:17:39.12:0,39,498	0/0:23,0:23:66.21:0,66,865	1/1:2,24:26:66.17:709,66,0	0/0:17,0:17:42.13:0,42,534	0/0:23,0:23:60.18:0,60,772	0/0:45,0:45:99:0,129,1676	0/0:20,0:20:57.17:0,57,732	1/1:1,16:17:45.07:480,45,0	1/1:2,25:27:69.17:742,69,0	0/0:19,0:19:48.16:0,48,632	0/0:21,0:21:63.20:0,63,826	0/0:34,0:33:90.29:0,90,1182	0/0:3,0:3:9.03:0,9,118
chr10	71336290	.	AC	A	4297.06	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.310;DP=672;FS=1.222;HRun=2;HaplotypeScore=72.0869;InbreedingCoeff=0.9976;MQ=70.56;MQ0=0;MQRankSum=0.402;QD=34.10;ReadPosRankSum=4.752;VQSLOD=5.1065;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:63.20:818,63,0	0/0:8,0:8:24.08:0,24,360	0/0:22,0:22:66.20:0,66,911	0/0:22,0:22:60.13:0,60,822	0/0:32,0:32:96.32:0,96,1422	0/0:21,0:21:63.19:0,63,899	0/0:25,0:25:72.22:0,72,1040	0/0:23,0:23:69.23:0,69,1007	0/0:19,0:19:54.18:0,54,808	0/0:34,0:34:99:0,102,1504	0/0:17,0:17:48.16:0,48,716	0/0:24,0:24:72.24:0,72,1061	1/1:0,17:17:45.15:584,45,0	0/0:18,0:18:51.17:0,51,764	0/0:25,0:25:72.24:0,72,1078	0/0:13,0:13:39.11:0,39,545	0/0:32,0:32:96.32:0,96,1428	1/1:1,30:31:81.22:1033,81,0	0/0:26,0:26:78.26:0,78,1144	0/0:28,0:28:84.28:0,84,1255	0/0:29,0:29:87.26:0,87,1249	0/0:44,0:44:99:0,126,1870	1/1:2,21:23:57.18:739,57,0	1/1:1,29:30:87.28:1124,87,0	0/0:24,0:23:72.22:0,72,1029	0/0:31,0:31:93.31:0,93,1356	0/0:23,0:23:69.19:0,69,989	0/0:6,0:6:18.06:0,18,270
chr10	71342110	.	TAC	T	189.65	PASS	AB=0.968;AC=12;AF=0.250;AN=48;BaseQRankSum=2.052;DP=593;FS=14.073;HRun=0;HaplotypeScore=98.7950;InbreedingCoeff=-0.3211;MQ=32.54;MQ0=139;MQRankSum=0.448;QD=0.63;ReadPosRankSum=2.618;VQSLOD=0.7364;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:32:20.04:20,0,95	./.	./.	./.	0/1:14,0:12:5.25:5,0,5	0/1:24,0:17:37.89:38,0,98	0/0:21,0:12:18.06:0,18,249	0/0:20,0:15:3:0,3,27	0/1:32,0:29:27.47:27,0,157	0/0:21,0:16:14.83:0,15,124	0/0:12,0:9:3:0,3,25	0/1:29,0:25:10.10:10,0,191	0/0:20,0:14:5.01:0,5,27	0/1:24,0:20:10.60:11,0,224	0/1:21,0:19:4.74:5,0,116	0/1:14,2:13:26.31:26,0,37	0/1:25,1:18:15.41:15,0,193	0/0:19,0:12:17.44:0,17,166	0/0:19,0:11:9.03:0,9,129	0/0:15,0:12:11.97:0,12,142	0/1:45,0:25:27.59:28,0,298	0/1:12,0:12:22.97:23,0,52	0/0:15,0:14:2.99:0,3,24	0/0:41,0:28:5.96:0,6,51	./.	0/1:11,5:14:99:110,0,100	0/0:21,0:15:9.48:0,9,108	0/0:8,0:4:0:0,0,0
chr10	71342158	.	T	TAG	417.40	PASS	AB=0.795;AC=8;AF=0.143;AN=56;BaseQRankSum=5.831;DP=688;FS=2.925;HRun=0;HaplotypeScore=120.0889;InbreedingCoeff=0.4013;MQ=43.79;MQ0=51;MQRankSum=-1.528;QD=2.50;ReadPosRankSum=-1.062;VQSLOD=2.3364;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:26:18.96:115,19,0	0/0:6,0:5:8.86:0,9,86	0/0:19,0:4:5.91:0,6,52	0/0:27,0:3:3.43:0,3,35	0/0:22,0:19:38.88:0,39,411	0/0:27,0:25:8.59:0,9,159	0/0:28,0:19:24.01:0,24,253	0/0:20,0:9:12.03:0,12,142	0/1:31,0:25:20.03:20,0,90	0/0:24,0:20:37.93:0,38,437	0/0:16,0:12:21.05:0,21,238	0/0:41,0:39:62.66:0,63,644	1/1:9,15:19:6.02:83,6,0	0/0:24,0:20:17.30:0,17,147	0/0:27,0:23:20.99:0,21,228	0/0:19,0:18:6.01:0,6,65	0/0:28,0:23:45.13:0,45,529	0/1:22,1:18:1.34:297,0,1	0/0:15,0:10:27.04:0,27,287	0/0:28,0:25:45.13:0,45,524	0/0:48,0:39:71.65:0,72,767	0/0:26,0:26:32.92:0,33,357	0/1:5,15:20:5.92:6,0,7	0/1:18,19:36:16.26:32,0,16	0/0:11,0:10:12.02:0,12,132	0/0:26,0:23:45.74:0,46,453	0/0:25,0:22:29.77:0,30,331	0/0:10,0:9:7.69:0,8,110
chr10	71344358	.	GA	G	1415.58	PASS	AB=0.888;AC=14;AF=0.250;AN=56;BaseQRankSum=8.288;DP=585;FS=4.685;HRun=12;HaplotypeScore=62.5634;InbreedingCoeff=0.4046;MQ=65.22;MQ0=7;MQRankSum=-0.157;QD=6.97;ReadPosRankSum=3.931;VQSLOD=2.2608;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:27:60.85:453,61,0	0/0:13,0:13:32.59:0,33,296	0/1:23,0:14:5.50:5,0,91	0/1:20,0:10:8.41:8,0,58	0/1:13,3:16:30.75:31,0,244	0/0:28,0:30:71.80:0,72,691	0/0:21,3:24:4.42:0,4,377	0/1:19,2:21:10.53:11,0,253	0/0:19,3:23:18:0,18,397	0/0:17,0:19:35.89:0,36,343	0/0:13,2:15:3.81:0,4,214	0/0:18,0:18:39.07:0,39,389	1/1:4,12:16:35.84:276,36,0	0/0:16,0:18:35.06:0,35,372	0/0:26,0:26:63.10:0,63,628	0/0:31,1:32:66.08:0,66,648	0/0:27,1:28:36.65:0,37,529	1/1:2,8:10:4.29:143,4,0	0/0:16,0:15:24.03:0,24,234	0/0:24,0:26:56.86:0,57,539	0/0:37,1:39:68.80:0,69,844	0/0:16,0:17:26.89:0,27,258	0/1:11,16:27:9.82:257,0,10	1/1:5,21:26:50.54:394,51,0	0/0:10,0:10:21.03:0,21,207	0/0:21,1:22:27.64:0,28,423	0/1:14,1:17:4.88:5,0,266	0/0:3,0:3:9:0,9,84
chr10	71344662	.	T	TTTTTG	2771.08	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-6.534;DP=732;FS=0.631;HRun=0;HaplotypeScore=124.9901;InbreedingCoeff=0.9406;MQ=66.02;MQ0=18;MQRankSum=1.105;QD=34.64;ReadPosRankSum=0.567;VQSLOD=3.6543;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:81.25:0,81,1400	1/1:3,7:10:21.07:585,21,0	0/0:73,0:31:8.26:0,8,161	0/0:70,0:23:4.30:0,4,19	0/0:18,0:18:39.12:0,39,663	0/0:20,0:20:39.13:0,39,702	0/0:22,0:22:39.11:0,39,629	0/0:33,0:33:36.08:0,36,514	0/0:15,0:15:27.07:0,27,430	1/1:16,15:32:45.10:1021,45,0	1/1:9,8:18:27:656,27,0	0/0:14,0:14:27.08:0,27,459	0/0:15,0:15:27.09:0,27,486	0/0:22,0:22:51.16:0,51,864	0/0:29,0:29:66.20:0,66,1101	0/0:19,0:19:36.11:0,36,614	0/0:18,0:18:36.06:0,36,554	0/0:26,0:26:48.13:0,48,856	0/0:29,0:29:30.10:0,30,540	0/0:27,0:27:57.16:0,57,930	0/0:21,0:21:27.09:0,27,486	0/0:20,0:20:36.11:0,36,615	0/0:26,0:26:33.09:0,33,538	0/0:24,0:25:42.14:0,42,750	1/1:10,10:20:24.08:668,24,0	0/0:24,0:24:51.15:0,51,886	0/0:24,0:24:51.16:0,51,879	0/0:18,0:18:27.09:0,27,486
chr10	71346033	.	TGG	T	708.19	PASS	AB=0.846;AC=3;AF=0.054;AN=56;BaseQRankSum=1.537;DP=390;FS=0.000;HRun=11;HaplotypeScore=50.0660;InbreedingCoeff=0.3598;MQ=55.83;MQ0=6;MQRankSum=1.269;QD=15.07;ReadPosRankSum=4.376;VQSLOD=1.2884;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,29:36:76.07:797,76,0	0/0:3,0:5:2.98:0,3,22	0/0:15,0:7:14.85:0,15,142	0/0:10,0:5:14.83:0,15,133	0/0:12,0:14:11.78:0,12,150	0/0:5,0:5:6.02:0,6,91	0/0:17,0:20:47.13:0,47,659	0/0:13,0:14:23.02:0,23,265	0/0:11,0:12:20.53:0,21,247	0/0:5,0:5:3:0,3,26	0/0:6,0:8:3:0,3,29	0/0:16,0:16:36.02:0,36,480	0/0:13,0:14:20.49:0,20,278	0/0:14,0:16:26.53:0,27,343	0/0:16,0:16:30.10:0,30,462	0/0:9,0:10:23.51:0,24,265	0/0:22,0:22:45.09:0,45,605	0/0:7,0:16:20.51:0,21,205	0/1:9,1:10:14.38:14,0,176	0/0:16,0:16:21.07:0,21,323	0/0:19,0:18:18.06:0,18,277	0/0:7,0:9:8.47:0,8,66	0/0:14,0:14:17.99:0,18,234	0/0:17,0:17:30.05:0,30,409	0/0:12,0:16:9:0,9,92	0/0:10,0:11:6:0,6,71	0/0:11,0:11:18.06:0,18,277	0/0:9,0:9:18.49:0,18,252
chr10	71347909	.	TAC	T	83.78	PASS	AB=0.946;AC=13;AF=0.295;AN=44;BaseQRankSum=0.113;DP=542;FS=1.779;HRun=0;HaplotypeScore=84.1095;InbreedingCoeff=0.3238;MQ=31.67;MQ0=142;MQRankSum=1.630;QD=0.52;ReadPosRankSum=0.904;VQSLOD=1.7071;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:20:5.98:47,6,0	0/0:9,1:6:1.55:0,2,4	./.	./.	0/0:16,0:11:12.02:0,12,154	0/0:23,0:18:0:0,0,0	0/0:23,0:16:12.03:0,12,157	./.	0/1:19,3:21:22.81:23,0,58	0/1:21,1:18:15.38:57,0,15	1/1:12,0:11:2.99:24,3,0	0/0:18,3:18:5.99:0,6,66	./.	0/0:18,0:18:20.92:0,21,254	0/0:26,0:22:15.43:0,15,126	1/1:19,0:17:2.21:16,2,0	0/0:26,0:14:17.88:0,18,154	1/1:13,1:5:1.55:4,2,0	1/1:15,0:11:2.98:26,3,0	0/0:13,0:12:5.93:0,6,86	0/0:36,0:22:9.02:0,9,114	0/1:24,0:16:14.82:15,0,38	./.	./.	0/0:8,0:8:5.95:0,6,54	0/0:19,0:18:24.09:0,24,232	0/0:13,0:13:15:0,15,185	0/0:7,0:4:3.01:0,3,44
chr10	71356132	.	CATTAAG	C	4876.88	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.578;DP=640;FS=2.775;HRun=0;HaplotypeScore=130.9940;InbreedingCoeff=0.9994;MQ=71.84;MQ0=0;MQRankSum=-13.216;QD=56.06;ReadPosRankSum=2.023;VQSLOD=5.1629;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.29:0,84,2821	1/1:1,9:10:27.09:615,27,0	0/0:19,0:19:51.17:0,51,1559	0/0:13,0:12:30.10:0,30,1021	0/0:22,0:22:60.19:0,60,1858	0/0:26,0:26:75.24:0,75,2494	0/0:17,0:17:48.16:0,48,1585	0/0:45,0:45:99:0,114,3595	0/0:23,0:23:63.20:0,63,2116	1/1:5,30:35:87.30:1975,87,0	1/1:3,16:19:51.18:1126,51,0	0/0:15,0:15:39.13:0,39,1200	0/0:25,0:25:60.19:0,60,1910	0/0:24,0:24:66.23:0,66,2161	0/0:28,0:28:78.27:0,78,2605	0/0:31,0:31:93.32:0,93,3162	0/0:17,0:17:48.16:0,48,1660	0/0:19,0:19:45.15:0,45,1377	0/0:19,0:19:54.17:0,54,1731	0/0:20,0:20:60.18:0,60,1900	0/0:16,0:16:48.16:0,48,1609	0/0:27,0:27:75.26:0,75,2579	0/0:17,0:17:51.17:0,51,1628	0/0:12,0:12:30.10:0,30,1023	1/1:3,20:23:51.18:1162,51,0	0/0:30,0:30:84.29:0,84,2912	0/0:39,0:38:99:0,111,3594	0/0:20,0:20:60.20:0,60,1763
chr10	71356332	.	G	GA	3548.99	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-8.852;DP=661;FS=1.829;HRun=6;HaplotypeScore=67.3036;InbreedingCoeff=0.9901;MQ=75.47;MQ0=0;MQRankSum=-1.145;QD=34.79;ReadPosRankSum=-0.452;VQSLOD=3.0435;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.11:0,69,688	1/1:0,10:10:24.08:302,24,0	0/0:19,0:15:22.89:0,23,342	0/0:22,0:21:37.07:0,37,327	0/0:23,0:23:66.13:0,66,666	0/0:35,0:35:96.12:0,96,959	0/0:22,0:22:60.13:0,60,612	0/0:38,0:38:99:0,102,1033	0/0:16,0:16:48.09:0,48,477	1/1:3,47:50:99:1717,138,0	1/1:1,23:24:69.18:850,69,0	0/0:21,0:21:57.12:0,57,580	0/0:25,0:25:66.15:0,66,674	0/0:23,0:23:60.12:0,60,605	0/0:30,0:30:90.18:0,90,905	0/0:47,0:47:99:0,123,1255	0/0:24,0:24:69.16:0,69,704	0/0:15,0:15:45.10:0,45,459	0/0:15,0:15:39.09:0,39,398	0/0:25,0:25:69.15:0,69,704	0/0:16,0:16:45.10:0,45,459	0/0:21,0:21:54.12:0,54,550	0/0:13,0:13:39.08:0,39,390	0/0:21,0:21:63.13:0,63,636	1/1:0,18:18:54.17:679,54,0	0/0:29,0:29:84.17:0,84,847	0/0:30,0:30:84.17:0,84,849	0/0:4,0:4:12.03:0,12,122
chr10	71357407	.	A	AT	1200.53	PASS	AB=0.867;AC=16;AF=0.286;AN=56;BaseQRankSum=4.943;DP=535;FS=1.527;HRun=13;HaplotypeScore=74.2093;InbreedingCoeff=0.6244;MQ=66.21;MQ0=13;MQRankSum=-2.118;QD=6.60;ReadPosRankSum=-2.959;VQSLOD=2.0028;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,4:34:59.72:378,60,0	1/1:1,1:5:11.53:71,12,0	1/1:7,0:6:2.04:6,2,0	0/1:15,0:14:15.81:16,0,24	0/1:11,13:24:4.73:250,0,5	0/0:23,0:23:40.54:0,41,266	0/1:21,2:28:2.95:3,0,237	0/0:20,0:18:5.90:0,6,179	0/0:14,0:15:31.76:0,32,211	1/1:10,1:16:11.46:154,11,0	1/1:1,12:13:30.03:279,30,0	0/0:20,0:20:32.48:0,32,222	0/0:16,0:17:35.20:0,35,247	0/0:22,0:23:52.51:0,53,353	0/0:20,0:22:36.67:0,37,235	0/1:19,3:22:35.94:36,0,218	0/0:35,1:39:60.50:0,60,527	0/0:16,0:16:28.79:0,29,191	0/0:17,1:17:7.74:0,8,162	0/0:11,0:13:27.83:0,28,176	0/0:19,0:20:37.69:0,38,252	0/0:14,0:14:25.80:0,26,170	0/0:13,0:13:26.75:0,27,185	0/0:19,0:19:27.85:0,28,176	1/1:8,1:13:31.83:188,32,0	0/0:23,0:24:57.56:0,58,381	0/0:19,0:19:41.61:0,42,287	0/0:10,0:11:22.81:0,23,150
chr10	71359735	.	AAGG	A	558.79	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=4.169;DP=464;FS=16.762;HRun=0;HaplotypeScore=79.7714;InbreedingCoeff=0.8216;MQ=49.64;MQ0=19;MQRankSum=-3.445;QD=10.35;ReadPosRankSum=-0.828;VQSLOD=1.6314;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:21:22.55:0,23,274	0/0:6,0:5:12.04:0,12,226	./.	0/0:31,0:9:2.50:0,2,47	0/0:10,0:10:21.07:0,21,424	0/0:19,0:17:26.97:0,27,481	0/0:22,0:18:42.09:0,42,849	0/0:19,0:17:23.88:0,24,320	0/0:12,0:11:24.07:0,24,435	0/0:23,0:20:44.95:0,45,703	0/0:9,0:7:21.02:0,21,332	0/0:21,0:20:36.12:0,36,714	1/1:10,2:11:4.37:172,4,0	0/0:16,0:16:25.71:0,26,489	0/0:19,0:18:33.08:0,33,562	0/0:17,0:17:30.09:0,30,575	0/0:13,0:8:11.74:0,12,257	1/1:6,2:5:7.81:68,8,0	0/0:10,0:8:12.04:0,12,231	0/0:9,0:9:18.06:0,18,377	0/0:38,0:29:40.17:0,40,750	0/0:12,0:12:27.04:0,27,510	1/1:2,6:8:8.86:134,9,0	1/1:10,16:23:23.62:324,24,0	0/0:12,0:12:27.09:0,27,555	0/0:17,0:16:33.08:0,33,555	0/0:11,0:10:27.04:0,27,483	0/0:4,0:4:9.02:0,9,151
chr10	71359777	.	G	GGAA	2216.84	PASS	AB=0.825;AC=8;AF=0.143;AN=56;BaseQRankSum=1.003;DP=702;FS=10.318;HRun=0;HaplotypeScore=89.0668;InbreedingCoeff=0.5599;MQ=42.93;MQ0=76;MQRankSum=-1.926;QD=17.05;ReadPosRankSum=0.616;VQSLOD=2.2062;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:26:88.87:207,0,89	1/1:18,1:13:20.21:383,20,0	0/0:33,0:1:2.94:0,3,18	0/0:29,0:2:6.02:0,6,78	0/0:20,0:18:42.14:0,42,689	0/0:21,0:17:35.99:0,36,494	0/0:35,0:24:53.08:0,53,852	0/0:33,0:27:58:0,58,894	0/0:20,0:16:38.44:0,38,640	0/1:17,19:27:99:962,0,102	1/1:5,14:15:1.13:363,1,0	0/0:30,0:27:58.58:0,59,1033	0/0:20,0:18:48.06:0,48,779	0/0:21,0:20:53.69:0,54,738	0/0:15,0:14:30.05:0,30,478	0/0:25,0:22:63.13:0,63,969	0/0:31,0:22:48.28:0,48,776	0/0:16,0:12:33.11:0,33,562	0/0:30,0:13:33.10:0,33,531	0/0:21,0:18:51.17:0,51,832	0/0:53,0:34:27.61:0,28,756	0/0:18,0:15:30.07:0,30,481	0/0:10,0:9:17.93:0,18,294	0/0:42,0:36:47.79:0,48,956	1/1:17,4:14:23.83:444,24,0	0/0:19,0:14:11.70:0,12,483	0/0:20,0:17:45.04:0,45,674	0/0:10,0:8:18.06:0,18,307
chr10	71360161	.	G	GA	874.09	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.793;DP=760;FS=1.516;HRun=8;HaplotypeScore=75.2445;InbreedingCoeff=0.9799;MQ=87.81;MQ0=0;MQRankSum=-3.155;QD=27.32;ReadPosRankSum=0.582;VQSLOD=4.1932;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,29:32:84.25:969,84,0	0/0:13,0:13:36.01:0,36,326	0/0:34,0:33:65.86:0,66,577	0/0:25,0:25:47.87:0,48,413	0/0:33,0:33:83.52:0,84,747	0/0:23,0:23:62.99:0,63,563	0/0:26,0:26:68.99:0,69,618	0/0:36,0:36:83.67:0,84,733	0/0:30,0:30:78.02:0,78,708	0/0:33,0:33:86.96:0,87,781	0/0:25,0:25:62.99:0,63,565	0/0:40,0:40:99:0,114,997	0/0:30,0:30:87.01:0,87,783	0/0:36,0:36:92.90:0,93,829	0/0:27,0:27:74.99:0,75,678	0/0:46,0:46:99:0,123,1111	0/0:30,0:30:78.01:0,78,707	0/0:11,0:11:33.02:0,33,302	0/0:18,0:18:41.99:0,42,375	0/0:23,0:23:69.02:0,69,626	0/0:23,0:23:63.02:0,63,572	0/0:24,3:27:16.26:0,16,396	0/0:22,0:22:53.97:0,54,485	0/0:33,0:33:89.96:0,90,802	0/0:19,0:19:41.99:0,42,379	0/0:30,0:30:84.01:0,84,760	0/0:29,0:29:77.98:0,78,695	0/0:6,0:6:18.01:0,18,163
chr10	71361736	.	AATAAATC	A	5071.43	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.291;DP=667;FS=1.026;HRun=0;HaplotypeScore=158.8098;InbreedingCoeff=0.9950;MQ=84.76;MQ0=0;MQRankSum=-11.841;QD=70.44;ReadPosRankSum=0.052;VQSLOD=5.2115;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,4710	1/1:0,10:10:24.08:670,24,0	0/0:27,0:27:81.28:0,81,2949	0/0:17,0:17:48.16:0,48,1825	0/0:28,0:28:84.26:0,84,3127	0/0:18,0:18:51.17:0,51,1977	0/0:28,0:28:84.29:0,84,3442	0/0:35,0:35:99:0,105,4158	0/0:21,0:21:63.20:0,63,2540	1/1:0,21:21:63.20:1619,63,0	1/1:0,16:16:42.14:1172,42,0	0/0:24,0:24:72.23:0,72,2785	0/0:32,0:32:96.24:0,96,3444	0/0:25,0:25:75.26:0,75,3097	0/0:35,0:35:99:0,105,4004	0/0:25,0:25:75.24:0,75,2895	0/0:18,0:18:54.19:0,54,2234	0/0:22,0:21:66.23:0,66,2766	0/0:26,0:26:78.27:0,78,3007	0/0:24,0:24:72.23:0,72,2824	0/0:32,0:32:96.31:0,96,3878	0/0:24,0:24:72.19:0,72,2763	0/0:19,0:19:57.17:0,57,2191	0/0:28,0:28:78.26:0,78,3123	1/1:0,25:25:60.16:1611,60,0	0/0:19,0:19:57.20:0,57,2393	0/0:23,0:23:69.24:0,69,2845	0/0:5,0:5:15.05:0,15,630
chr10	71363688	.	CT	C	929.27	PASS	AB=0.831;AC=12;AF=0.214;AN=56;BaseQRankSum=1.990;DP=624;FS=6.488;HRun=14;HaplotypeScore=80.5899;InbreedingCoeff=0.5386;MQ=79.82;MQ0=0;MQRankSum=-1.060;QD=5.43;ReadPosRankSum=4.878;VQSLOD=2.4902;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:24:14.87:231,15,0	0/0:3,0:12:28.56:0,29,153	0/0:19,2:18:1.76:0,2,146	0/1:26,1:22:1.23:1,0,91	0/0:32,1:34:48.29:0,48,564	0/0:23,0:25:47.70:0,48,408	0/1:11,5:17:2.31:2,0,249	0/0:16,0:22:52.06:0,52,438	0/0:17,2:20:9.76:0,10,339	0/0:15,0:27:32.04:0,32,190	0/0:16,0:27:50.77:0,51,321	0/0:23,0:25:65.53:0,66,540	0/1:13,11:24:19.54:184,0,20	0/0:16,0:17:35.81:0,36,299	0/0:18,1:20:17.23:0,17,252	0/0:27,1:30:57.03:0,57,618	0/0:23,1:24:39.42:0,39,487	1/1:5,8:14:1.99:126,2,0	0/1:13,2:18:5.15:5,0,203	0/0:26,2:28:16.20:0,16,403	0/0:8,0:7:15.49:0,15,140	0/0:14,0:16:23.03:0,23,232	1/1:10,19:30:9.58:341,10,0	1/1:7,9:17:18.10:189,18,0	0/0:12,0:24:53.86:0,54,323	0/0:25,2:30:18.69:0,19,430	0/0:31,0:33:74.71:0,75,649	0/0:9,0:10:17.86:0,18,154
chr10	71364817	.	ATGTC	A	1776.15	PASS	AB=0.966;AC=9;AF=0.161;AN=56;BaseQRankSum=7.661;DP=685;FS=2.827;HRun=0;HaplotypeScore=113.1817;InbreedingCoeff=0.7981;MQ=61.69;MQ0=2;MQRankSum=0.527;QD=15.18;ReadPosRankSum=2.339;VQSLOD=3.0925;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:50:81.28:0,81,1407	1/1:8,10:18:21.07:328,21,0	0/0:16,0:9:6.02:0,6,127	0/0:25,0:16:7.27:0,7,130	0/0:36,0:36:66.23:0,66,1518	0/0:25,1:27:16.27:0,16,1252	0/0:26,1:27:1.24:0,1,1017	0/0:31,0:31:30.09:0,30,609	0/0:19,0:19:27.08:0,27,560	1/1:15,14:30:45.14:683,45,0	1/1:10,12:23:30.10:470,30,0	0/0:11,0:11:24.08:0,24,558	0/0:28,0:28:54.19:0,54,1263	0/1:27,1:28:4.80:5,0,830	0/0:26,0:26:51.18:0,51,1206	0/0:23,0:23:54.19:0,54,1277	0/0:27,0:27:60.19:0,60,1345	0/0:21,0:21:45.15:0,45,1018	0/0:28,0:28:33.11:0,33,779	0/0:31,0:31:57.18:0,57,1292	0/0:38,0:38:75.24:0,75,1728	0/0:17,0:17:36.12:0,36,830	0/0:17,0:17:27.09:0,27,639	0/0:11,0:11:24.06:0,24,489	1/1:9,8:18:30.10:450,30,0	0/0:17,0:17:18.06:0,18,414	0/0:25,0:25:51.18:0,51,1181	0/0:17,0:16:24.08:0,24,567
chr10	71365034	.	G	GTATC	5295.68	PASS	AB=0.893;AC=9;AF=0.161;AN=56;BaseQRankSum=-9.201;DP=611;FS=1.005;HRun=0;HaplotypeScore=95.7268;InbreedingCoeff=0.8671;MQ=62.55;MQ0=1;MQRankSum=-1.610;QD=50.44;ReadPosRankSum=1.355;VQSLOD=5.4181;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.20:0,60,1082	1/1:1,14:16:39.13:1039,39,0	0/0:23,0:19:54.15:0,54,961	0/0:17,0:15:45.15:0,45,839	0/0:27,0:27:72.25:0,72,1343	0/0:16,0:16:48.16:0,48,896	0/0:19,0:19:54.19:0,54,1001	0/0:32,0:32:90.31:0,90,1680	0/0:16,0:16:33.11:0,33,614	1/1:2,22:25:75.24:1936,75,0	1/1:2,13:18:36.12:952,36,0	0/0:23,0:23:60.21:0,60,1120	0/0:30,0:30:74.83:0,75,1400	0/0:15,0:15:42.14:0,42,784	0/0:28,0:28:75.26:0,75,1393	0/0:29,0:29:65.91:0,66,1232	0/0:40,0:40:87.27:0,87,1561	0/0:24,0:24:54.17:0,54,959	0/0:14,0:13:30.10:0,30,560	0/0:16,0:16:45.15:0,45,840	0/0:22,0:22:60.21:0,60,1104	0/0:17,0:17:51.17:0,51,951	0/0:15,0:15:39.13:0,39,728	0/0:17,0:17:39.61:0,40,729	1/1:2,18:21:45.15:1199,45,0	0/1:22,3:25:99:171,0,1032	0/0:30,0:30:81.26:0,81,1465	0/0:12,0:12:27.09:0,27,504
chr10	71365479	.	ACTCTCTCTCTCTCTCT	A	1418.87	PASS	AB=1.000;AC=11;AF=0.220;AN=50;BaseQRankSum=5.223;DP=550;FS=1.029;HRun=0;HaplotypeScore=216.2460;InbreedingCoeff=0.7140;MQ=73.28;MQ0=12;MQRankSum=-2.808;QD=14.19;ReadPosRankSum=0.825;VQSLOD=2.2975;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:42.14:0,42,2583	./.	0/0:29,0:18:12.04:0,12,477	0/0:48,0:20:11.59:0,12,288	0/0:22,0:22:30.10:0,30,1813	0/0:16,0:16:29.31:0,29,1766	0/0:23,0:22:36.12:0,36,1929	0/0:32,0:32:11.53:0,12,489	0/0:18,0:17:30.10:0,30,1660	1/1:18,0:18:11.08:591,11,0	./.	0/0:14,0:14:24.54:0,25,1297	1/1:11,3:16:12.04:333,12,0	0/0:20,0:20:33.11:0,33,1941	0/0:19,0:19:39.13:0,39,2305	0/0:19,0:19:42.14:0,42,2390	0/0:25,0:25:57.13:0,57,3176	1/1:10,3:14:9.48:400,9,0	0/0:17,0:16:18.06:0,18,926	0/0:13,0:11:12.04:0,12,856	0/0:27,0:27:42.14:0,42,2432	0/0:13,0:18:18.06:0,18,973	1/1:6,2:11:2.99:25,3,0	./.	1/1:9,8:21:3.01:130,3,0	0/1:20,0:19:88.79:89,0,2107	0/0:23,0:26:48.13:0,48,2591	0/0:7,0:7:6.02:0,6,328
chr10	71365502	.	CTCTCTCTCTCTCTCTCTG	C	1494.01	PASS	AB=1.000;AC=9;AF=0.173;AN=52;BaseQRankSum=5.550;DP=602;FS=0.727;HRun=0;HaplotypeScore=217.4571;InbreedingCoeff=0.2419;MQ=51.76;MQ0=39;MQRankSum=-0.077;QD=12.25;ReadPosRankSum=-1.872;VQSLOD=2.4651;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:36.09:0,36,3362	1/1:10,0:10:2.71:24,3,0	0/0:10,0:5:12.04:0,12,477	0/0:25,0:6:11.50:0,12,287	0/0:25,0:25:39.13:0,39,2607	0/0:26,0:26:42.24:0,42,2575	0/0:33,0:28:38.84:0,39,1961	0/0:20,0:19:25.91:0,26,1095	0/0:21,0:18:51.50:0,51,2556	1/1:6,16:21:28.91:744,29,0	./.	0/0:20,0:19:42.60:0,43,2269	0/1:23,0:22:99:288,0,193	0/0:26,0:24:51.15:0,51,3111	0/0:25,0:25:32.29:0,32,2714	0/0:26,0:23:54.19:0,54,3002	0/0:27,0:27:67.37:0,67,3697	0/1:12,0:12:97.23:374,0,97	0/0:16,0:15:33.11:0,33,1673	0/0:17,0:13:24.07:0,24,1360	0/0:35,0:32:57.13:0,57,2992	0/0:20,0:20:30.09:0,30,1452	0/1:13,0:13:18.98:19,0,40	./.	0/1:16,0:16:39.91:121,0,40	0/1:26,0:22:64.73:65,0,3214	0/0:30,0:28:67.99:0,68,3749	0/0:10,0:6:9.02:0,9,353
chr10	71365518	.	C	CTGTGTG	721.48	PASS	AB=1.000;AC=9;AF=0.180;AN=50;BaseQRankSum=3.046;DP=579;FS=1.972;HRun=0;HaplotypeScore=138.9857;InbreedingCoeff=0.7489;MQ=47.13;MQ0=43;MQRankSum=-0.886;QD=7.14;ReadPosRankSum=-2.516;VQSLOD=2.3353;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:54.11:0,54,779	0/0:11,0:11:9.03:0,9,174	./.	./.	0/0:27,0:27:30.10:0,30,585	0/0:25,0:25:15.04:0,15,358	0/0:31,0:26:11.14:0,11,230	0/0:26,0:24:30.03:0,30,388	0/0:20,0:17:35.70:0,36,658	0/0:21,0:19:19.57:0,20,259	./.	0/0:25,0:23:38.65:0,39,726	1/1:22,0:21:26.19:372,26,0	0/0:30,0:27:48.15:0,48,867	0/0:21,0:21:24.07:0,24,433	0/0:23,0:20:20.87:0,21,419	0/0:26,0:26:39.10:0,39,650	1/1:14,0:13:18.06:351,18,0	0/0:19,0:18:17.94:0,18,338	0/0:17,0:14:18.06:0,18,330	0/1:33,0:30:0.94:1,0,337	0/0:17,0:18:21.07:0,21,410	1/1:12,0:12:6.49:125,6,0	1/1:5,11:20:2.04:6,2,0	0/0:17,0:17:12.04:0,12,245	0/0:26,0:21:33.07:0,33,664	0/0:27,0:25:39.13:0,39,751	0/0:12,0:8:3.01:0,3,61
chr10	71366781	.	TCACACA	T	452.32	PASS	AB=0.785;AC=4;AF=0.080;AN=50;BaseQRankSum=4.932;DP=584;FS=1.206;HRun=0;HaplotypeScore=125.1432;InbreedingCoeff=-0.0349;MQ=67.91;MQ0=14;MQRankSum=-4.351;QD=5.03;ReadPosRankSum=-0.954;VQSLOD=2.1583;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:4:6.02:0,6,176	./.	./.	0/0:17,0:23:20.59:0,21,273	0/0:19,0:18:21.05:0,21,334	0/0:22,0:24:27.34:0,27,594	0/0:13,0:11:4.53:0,5,25	0/0:18,0:18:21.07:0,21,406	0/0:17,0:16:18.03:0,18,226	0/0:9,0:18:12.03:0,12,214	0/0:22,0:23:39.06:0,39,1000	0/1:12,5:16:19.27:169,0,19	0/0:22,0:23:29.18:0,29,681	0/0:23,0:27:35.21:0,35,728	0/0:26,0:28:42.60:0,43,969	0/0:25,0:28:30.37:0,30,795	0/1:16,7:24:38.85:206,0,39	0/0:5,0:6:6.02:0,6,77	0/0:21,0:21:18.01:0,18,427	0/0:29,0:29:33.06:0,33,668	0/0:11,0:11:12.04:0,12,292	0/1:11,2:13:38.55:90,0,39	0/1:26,7:35:7.05:95,0,7	0/0:16,0:16:24.08:0,24,692	0/0:12,0:13:17.20:0,17,338	0/0:15,0:16:26.40:0,26,601	0/0:7,0:7:13.40:0,13,330
chr10	71366968	.	T	TA	1009.48	PASS	AB=0.611;AC=7;AF=0.125;AN=56;BaseQRankSum=-4.363;DP=539;FS=2.051;HRun=10;HaplotypeScore=57.0997;InbreedingCoeff=0.8055;MQ=72.65;MQ0=0;MQRankSum=1.342;QD=17.11;ReadPosRankSum=0.518;VQSLOD=4.0867;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:56.87:0,57,462	1/1:2,5:7:18:180,18,0	0/0:9,0:10:13.98:0,14,100	0/0:10,0:11:11.29:0,11,91	0/0:31,0:31:72.89:0,73,645	0/0:33,0:33:89.86:0,90,736	0/0:14,0:15:37.99:0,38,301	0/0:22,0:22:38.89:0,39,316	0/0:20,0:20:38.92:0,39,320	1/1:4,13:17:11.42:312,11,0	0/1:8,14:22:20.88:310,0,21	0/0:17,0:17:38.86:0,39,313	0/0:20,1:23:23.95:0,24,386	0/0:20,0:20:47.92:0,48,394	0/0:25,0:25:59.84:0,60,484	0/0:22,0:22:56.88:0,57,462	0/0:14,0:14:36.84:0,37,298	0/0:12,0:12:20.96:0,21,172	0/0:19,0:19:47.92:0,48,394	0/0:26,0:26:71.88:0,72,585	0/0:13,0:13:35.94:0,36,296	0/0:19,0:20:49.88:0,50,389	0/0:16,0:17:34.96:0,35,272	0/0:21,0:22:58.97:0,59,474	1/1:2,11:13:33.08:352,33,0	0/0:26,0:26:62.92:0,63,517	0/0:28,0:28:74.85:0,75,608	0/0:11,0:11:26.97:0,27,222
chr10	71367150	.	TTTTG	T	1604.75	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=10.567;DP=585;FS=1.751;HRun=0;HaplotypeScore=101.7278;InbreedingCoeff=0.6430;MQ=65.61;MQ0=4;MQRankSum=-1.684;QD=18.03;ReadPosRankSum=1.069;VQSLOD=3.5348;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:21.86:183,0,22	1/1:0,5:4:3.01:51,3,0	0/1:20,0:14:14.44:14,0,193	0/0:11,0:7:14.95:0,15,132	0/0:30,0:30:81.25:0,81,1795	0/0:20,0:20:60.13:0,60,1100	0/0:19,0:19:4.93:0,5,763	0/0:44,0:43:99:0,99,2020	0/0:15,0:15:39.11:0,39,882	1/1:1,18:18:51.04:745,51,0	1/1:2,16:17:42:565,42,0	0/0:19,0:19:51.15:0,51,1153	0/0:18,0:18:48.13:0,48,911	0/0:16,0:16:45.14:0,45,998	0/0:37,0:37:99:0,108,2336	0/0:25,0:25:72.01:0,72,1308	0/0:34,0:34:92.62:0,93,1588	0/0:10,0:10:27.08:0,27,483	0/0:13,0:13:32.89:0,33,635	0/0:20,0:20:50.72:0,51,977	0/0:23,0:22:63.08:0,63,1141	0/0:14,0:14:42.09:0,42,708	0/0:22,0:22:60.15:0,60,1184	0/0:13,0:13:39.13:0,39,834	1/1:1,11:12:12.04:204,12,0	0/0:30,2:32:2.64:0,3,1314	0/0:33,0:31:96.20:0,96,1811	0/0:28,0:28:75.24:0,75,1505
chr10	71367153	.	TG	T	525.13	PASS	AB=0.933;AC=12;AF=0.214;AN=56;BaseQRankSum=11.652;DP=573;FS=0.524;HRun=1;HaplotypeScore=70.8205;InbreedingCoeff=0.7511;MQ=66.50;MQ0=4;MQRankSum=-3.014;QD=5.36;ReadPosRankSum=0.153;VQSLOD=0.2354;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,8:14:33.11:230,33,0	1/1:5,0:4:2.84:14,3,0	0/1:21,1:17:10.55:11,0,186	0/1:9,1:6:11.40:11,0,73	0/0:27,0:27:81.13:0,81,957	0/0:20,0:20:47.73:0,48,563	0/0:20,0:20:42.74:0,43,513	0/0:43,0:42:60.07:0,60,1091	0/0:14,0:14:36.06:0,36,446	1/1:19,0:18:31.01:196,31,0	1/1:16,0:15:37.76:176,38,0	0/0:20,0:20:53.90:0,54,633	0/0:18,0:18:48.04:0,48,533	0/0:15,0:15:45.12:0,45,543	0/0:37,0:37:99:0,105,1237	0/0:24,0:24:60.10:0,60,714	0/0:34,0:34:81.15:0,81,927	0/0:9,0:9:23.83:0,24,259	0/0:14,0:14:35.67:0,36,393	0/0:19,0:19:53.68:0,54,585	0/0:22,0:21:57.95:0,58,623	0/0:15,0:15:33.71:0,34,423	0/0:21,0:21:57.11:0,57,666	0/0:14,0:14:42.10:0,42,496	1/1:12,0:12:11.36:58,11,0	0/0:28,1:29:57.57:0,58,788	0/0:33,0:31:86.58:0,87,934	0/0:27,0:27:74.91:0,75,808
chr10	71367155	.	TTGTTG	T	345.78	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.790;DP=564;FS=2.160;HRun=0;HaplotypeScore=115.5214;InbreedingCoeff=0.8029;MQ=65.31;MQ0=4;MQRankSum=-3.139;QD=23.05;ReadPosRankSum=-0.998;VQSLOD=3.0838;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,7:15:20.64:438,21,0	0/0:5,0:4:3.01:0,3,30	0/0:20,0:16:11.23:0,11,686	0/0:11,0:7:17.95:0,18,284	0/0:29,0:29:87.30:0,87,2600	0/0:21,0:21:60.19:0,60,1583	0/0:20,0:20:51.17:0,51,1225	0/0:41,0:41:87.06:0,87,2729	0/0:13,0:13:36.12:0,36,1146	0/0:19,0:18:51.06:0,51,548	0/0:17,0:16:41.87:0,42,396	0/0:20,0:20:53.92:0,54,1606	0/0:17,0:17:45.15:0,45,1282	0/0:15,0:15:45.15:0,45,1316	0/0:36,0:36:99:0,105,3217	0/0:22,0:22:66.22:0,66,1833	0/0:32,0:32:86.77:0,87,2474	0/0:9,0:9:27.09:0,27,654	0/0:13,0:13:36.12:0,36,931	0/0:19,0:19:54.18:0,54,1522	0/0:22,0:21:60.20:0,60,1667	0/0:15,0:15:36.12:0,36,1019	0/0:21,0:21:60.20:0,60,1646	0/0:14,0:14:42.14:0,42,1143	0/0:13,0:13:15.03:0,15,177	0/0:28,0:28:78.25:0,78,2162	0/0:32,0:30:90.29:0,90,2463	0/0:25,0:25:69.23:0,69,1997
chr10	71372479	.	T	TA	3074.30	PASS	AB=0.782;AC=16;AF=0.286;AN=56;BaseQRankSum=-7.428;DP=651;FS=6.795;HRun=10;HaplotypeScore=69.1486;InbreedingCoeff=0.6575;MQ=78.28;MQ0=0;MQRankSum=-1.573;QD=14.71;ReadPosRankSum=-0.179;VQSLOD=3.6461;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:89.82:0,90,731	1/1:3,4:7:12.03:128,12,0	0/0:24,0:24:33.84:0,34,241	0/1:22,0:22:6.55:7,0,129	0/0:28,0:28:56.88:0,57,462	0/0:20,0:19:44.92:0,45,369	0/0:17,0:17:47.93:0,48,391	0/0:28,0:28:46.86:0,47,370	0/0:24,0:24:62.89:0,63,512	1/1:9,19:28:10.79:493,11,0	0/1:8,10:18:14.53:227,0,15	0/0:18,0:18:50.94:0,51,419	1/1:5,22:27:54.08:557,54,0	0/0:22,0:22:47.87:0,48,387	0/0:28,0:28:80.88:0,81,661	0/0:33,1:34:54.88:0,55,655	0/0:27,0:28:76.94:0,77,622	0/1:9,18:27:32.38:510,0,32	0/0:21,0:21:62.91:0,63,514	0/0:25,0:25:62.79:0,63,500	0/0:24,0:24:56.88:0,57,464	0/0:21,0:21:50.91:0,51,415	1/1:1,23:24:63.08:656,63,0	1/1:3,14:17:33.08:352,33,0	1/1:3,12:15:11.46:327,11,0	0/1:20,3:23:7.06:7,0,362	0/0:37,1:38:69.50:0,69,751	0/0:6,0:6:17.86:0,18,138
chr10	71375918	.	G	GC	4482.57	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.968;DP=557;FS=4.293;HRun=1;HaplotypeScore=51.0141;InbreedingCoeff=0.9950;MQ=84.36;MQ0=0;MQRankSum=-3.505;QD=35.86;ReadPosRankSum=1.138;VQSLOD=4.8791;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,38:40:84.28:1258,84,0	0/0:7,0:7:21.04:0,21,256	0/0:17,0:17:45.14:0,45,574	0/0:19,0:19:54.17:0,54,688	0/0:10,0:10:27.09:0,27,350	0/0:18,0:18:54.18:0,54,701	0/0:31,0:31:90.29:0,90,1169	0/0:23,0:23:69.22:0,69,884	0/0:17,0:17:51.17:0,51,661	0/0:20,0:20:54.18:0,54,701	0/0:7,0:7:18.06:0,18,233	0/0:33,0:33:99:0,99,1268	1/1:0,20:20:48.16:717,48,0	0/0:24,0:24:69.22:0,69,890	0/0:13,0:13:36.12:0,36,467	0/0:16,0:16:48.16:0,48,623	0/0:31,0:31:87.28:0,87,1128	1/1:1,26:27:72.24:1075,72,0	0/0:16,0:16:45.12:0,45,566	0/0:6,0:6:18.06:0,18,234	0/0:43,0:43:99:0,126,1635	0/0:15,0:15:42.14:0,42,545	1/1:2,14:16:36.12:534,36,0	1/1:1,21:22:60.20:899,60,0	0/0:17,0:17:45.15:0,45,584	0/0:19,0:19:54.16:0,54,676	0/0:15,0:15:45.15:0,45,582	0/0:15,0:15:45.11:0,45,566
chr10	71376736	.	A	AT	1173.34	PASS	AB=0.721;AC=9;AF=0.161;AN=56;BaseQRankSum=-1.940;DP=728;FS=9.628;HRun=13;HaplotypeScore=88.8900;InbreedingCoeff=0.4424;MQ=72.18;MQ0=7;MQRankSum=1.220;QD=7.43;ReadPosRankSum=1.133;VQSLOD=2.0743;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,22:31:4.84:376,0,5	0/0:9,0:9:20.82:0,21,144	0/0:35,2:13:1.47:0,1,32	0/0:25,0:21:1.40:0,1,56	0/0:28,2:32:35.64:0,36,374	0/0:30,2:34:28.72:0,29,470	0/0:23,3:27:24.56:0,25,300	0/0:37,0:37:80.51:0,81,537	0/0:13,1:15:9.34:0,9,189	0/0:17,0:17:1.94:0,2,136	0/0:22,1:26:32.29:0,32,340	0/0:30,1:31:15.14:0,15,359	1/1:4,14:18:8.21:200,8,0	0/0:24,1:28:23.50:0,23,270	0/1:30,2:37:17.52:18,0,425	0/0:30,0:30:49.22:0,49,440	0/0:24,1:28:37.42:0,37,373	0/1:10,13:23:11.13:193,0,11	0/0:25,0:27:42.17:0,42,267	0/0:22,0:23:51.61:0,52,340	0/0:9,0:9:17.84:0,18,123	0/0:18,0:18:14.51:0,15,207	1/1:9,13:23:20.86:182,21,0	1/1:3,23:26:7.53:350,8,0	0/0:30,1:35:47.53:0,48,456	0/0:23,2:25:5.93:0,6,246	0/0:32,2:37:38.98:0,39,462	0/0:17,1:19:2.97:0,3,148
chr10	71377072	.	T	TG	987.31	PASS	AB=0.718;AC=8;AF=0.143;AN=56;BaseQRankSum=-5.973;DP=561;FS=3.792;HRun=9;HaplotypeScore=72.3759;InbreedingCoeff=0.3135;MQ=75.09;MQ0=1;MQRankSum=-0.776;QD=10.28;ReadPosRankSum=-0.145;VQSLOD=2.6444;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:68.97:0,69,599	0/1:2,3:5:14.02:88,0,14	0/1:18,0:18:4.43:4,0,155	0/0:7,0:7:10.05:0,10,84	0/0:22,0:22:50.98:0,51,443	0/0:24,0:24:62.98:0,63,547	0/0:22,0:22:53.98:0,54,469	0/0:23,0:23:41.16:0,41,346	0/0:13,0:13:2.91:0,3,253	1/1:5,8:13:1.02:239,1,0	0/1:8,11:19:45.08:232,0,45	0/0:39,0:39:99:0,105,906	0/0:27,0:27:62.98:0,63,547	0/0:21,0:21:59.98:0,60,521	0/0:21,0:21:56.97:0,57,491	0/0:27,1:29:43.84:0,44,598	0/1:9,15:24:14.90:324,0,15	0/0:14,0:14:32.96:0,33,282	0/0:10,0:10:23.99:0,24,208	0/0:14,1:15:9.21:0,9,305	0/0:23,0:24:67.03:0,67,551	0/0:19,0:19:38.77:0,39,338	0/0:14,0:14:35.99:0,36,312	0/0:21,0:21:56.94:0,57,488	1/1:4,13:17:21.06:232,21,0	0/0:13,0:13:29.98:0,30,258	0/0:37,0:36:99:0,105,911	0/0:23,0:23:56.96:0,57,493
chr10	71384881	.	C	CT	2228.30	PASS	AB=0.944;AC=12;AF=0.214;AN=56;BaseQRankSum=-6.565;DP=677;FS=4.528;HRun=10;HaplotypeScore=75.2762;InbreedingCoeff=0.7709;MQ=68.60;MQ0=6;MQRankSum=2.607;QD=13.50;ReadPosRankSum=-0.242;VQSLOD=3.7070;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:92.83:0,93,757	1/1:0,5:5:14.99:146,15,0	0/0:51,0:32:34.09:0,34,237	0/1:42,0:23:37.73:53,0,38	0/0:19,0:20:52.44:0,52,406	0/0:15,1:16:9.94:0,10,284	0/0:24,0:26:57.96:0,58,449	0/0:30,0:30:56.67:0,57,435	0/0:16,0:18:49.02:0,49,381	1/1:8,23:31:60.10:614,60,0	1/1:4,14:17:13.49:319,13,0	0/0:28,0:29:73.85:0,74,586	0/0:19,0:20:43.90:0,44,343	0/0:29,0:28:71.79:0,72,579	0/0:31,1:33:47.93:0,48,586	0/0:28,0:28:46.45:0,46,498	1/1:3,34:38:86.38:953,86,0	0/0:13,0:13:25.87:0,26,238	0/0:12,0:12:20.88:0,21,159	0/0:16,0:16:34.91:0,35,268	0/0:15,0:18:36.06:0,36,264	0/1:7,1:8:14.01:14,0,105	0/0:11,0:11:20.94:0,21,172	0/0:30,0:30:65.87:0,66,537	1/1:3,16:21:22.38:308,22,0	0/0:28,1:33:39.84:0,40,490	0/0:29,0:29:71.85:0,72,582	0/0:10,0:10:20.93:0,21,167
chr10	71387211	.	AT	A	642.22	PASS	AB=0.648;AC=7;AF=0.125;AN=56;BaseQRankSum=5.221;DP=482;FS=2.366;HRun=15;HaplotypeScore=57.4224;InbreedingCoeff=0.4027;MQ=79.39;MQ0=0;MQRankSum=0.892;QD=7.22;ReadPosRankSum=2.959;VQSLOD=2.7620;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:12,13:25:28.35:185,0,28	0/0:3,0:3:5.84:0,6,40	0/0:17,0:16:2.80:0,3,76	0/0:17,1:14:5.97:0,6,46	0/0:19,1:20:27.17:0,27,333	0/0:16,0:17:34.37:0,34,276	0/0:15,1:16:15.27:0,15,245	0/0:21,0:21:50.74:0,51,420	0/0:20,0:20:47.81:0,48,392	0/0:23,1:24:22.71:0,23,319	0/0:18,0:18:44.98:0,45,389	0/0:14,1:15:13.70:0,14,232	1/1:5,14:20:14.81:197,15,0	0/0:8,0:8:12.86:0,13,99	0/0:25,2:27:3.53:0,4,374	0/0:17,0:19:47:0,47,369	0/0:12,2:14:10.71:0,11,211	1/1:4,13:17:32.49:211,32,0	0/0:13,0:14:23.83:0,24,194	0/0:25,0:25:27.05:0,27,327	0/0:4,0:3:6:0,6,53	0/0:16,0:16:41.68:0,42,341	0/1:4,14:19:36.91:157,0,37	0/1:5,3:8:0.56:30,0,1	0/0:16,2:19:4.84:0,5,265	0/0:20,0:21:38.83:0,39,329	0/0:21,2:24:0.27:0,0,343	0/0:11,0:12:32.79:0,33,265
chr10	71388834	.	G	GC	92.79	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.092;DP=397;FS=10.662;HRun=7;HaplotypeScore=42.3671;InbreedingCoeff=0.6683;MQ=77.93;MQ0=0;MQRankSum=-2.149;QD=4.42;ReadPosRankSum=-0.847;VQSLOD=-0.5631;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,11:14:15.52:181,16,0	0/0:8,0:8:20.98:0,21,192	0/0:10,0:10:17.46:0,17,141	0/0:12,0:12:23.98:0,24,220	0/0:17,0:17:39.06:0,39,376	0/0:22,0:22:60.01:0,60,563	0/0:14,0:14:42.05:0,42,399	0/0:23,0:23:30.02:0,30,290	0/0:15,0:15:45.07:0,45,434	0/1:7,0:7:4.60:5,0,152	0/0:18,0:17:39.03:0,39,368	0/0:18,0:18:37.55:0,38,336	0/0:15,0:15:42.06:0,42,405	0/0:15,0:15:33.02:0,33,310	0/0:15,0:15:33.05:0,33,319	0/0:22,0:22:60.07:0,60,573	0/0:17,0:17:36.04:0,36,347	0/0:6,0:6:17.99:0,18,165	0/0:12,0:12:33.04:0,33,314	0/0:9,0:9:17.92:0,18,161	0/0:12,0:12:33.02:0,33,311	0/0:11,0:11:24.04:0,24,230	0/0:8,0:8:23.83:0,24,216	0/0:7,0:7:21.03:0,21,203	0/0:11,0:11:18.78:0,19,179	0/0:16,0:16:39:0,39,361	0/0:37,0:36:99:0,111,1063	0/0:6,0:6:15.02:0,15,145
chr10	71389019	.	C	CT	166.06	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-0.534;DP=592;FS=0.892;HRun=11;HaplotypeScore=88.0734;InbreedingCoeff=0.4580;MQ=72.72;MQ0=5;MQRankSum=-1.112;QD=2.77;ReadPosRankSum=-1.985;VQSLOD=-0.4191;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,18:23:6.82:247,7,0	0/0:7,0:7:17.91:0,18,139	0/1:37,0:12:2.44:2,0,39	0/0:28,1:18:3.96:0,4,76	0/0:35,0:36:50.52:0,51,542	0/0:19,0:19:35.78:0,36,278	0/0:14,0:16:30.88:0,31,216	0/0:37,1:38:49.06:0,49,352	0/0:15,0:16:31.73:0,32,229	0/0:18,0:20:27.38:0,27,350	0/0:23,1:24:23.28:0,23,357	0/0:21,0:21:39.73:0,40,282	0/0:17,0:17:15.66:0,16,212	0/0:18,0:18:20.84:0,21,162	0/0:30,0:30:47.51:0,48,359	0/0:29,0:29:54.80:0,55,406	0/0:15,0:15:29.78:0,30,226	0/0:11,0:14:20.98:0,21,134	0/0:21,1:24:15.36:0,15,280	0/0:22,0:22:47.77:0,48,371	0/0:12,0:12:3.71:0,4,160	0/0:5,0:5:8.94:0,9,69	0/0:12,1:15:9.68:0,10,237	0/0:12,0:12:20.87:0,21,162	0/0:14,0:14:29.86:0,30,231	0/0:24,0:25:31.31:0,31,407	0/0:41,0:42:68.19:0,68,538	0/0:11,0:11:20.88:0,21,162
chr10	71390438	.	GCAAA	G	4185.95	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.116;DP=826;FS=0.000;HRun=0;HaplotypeScore=134.6625;InbreedingCoeff=0.9896;MQ=69.22;MQ0=1;MQRankSum=-0.854;QD=39.49;ReadPosRankSum=4.795;VQSLOD=3.3448;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,172,4251	0/0:9,0:9:24.08:0,24,596	0/0:24,0:24:57.19:0,57,1249	0/0:38,0:37:69.24:0,69,1629	0/0:33,0:33:90.31:0,90,2274	0/0:27,0:27:72.25:0,72,1821	0/0:26,0:26:57.20:0,57,1414	0/0:27,0:27:63.21:0,63,1505	0/0:29,0:29:84.27:0,84,1994	0/0:26,0:26:60.21:0,60,1516	0/0:31,0:31:81.26:0,81,1947	0/0:41,0:41:99:0,123,3015	1/1:3,30:32:87.30:1503,87,0	0/0:37,0:37:99:0,99,2476	0/0:34,0:34:93.32:0,93,2318	0/0:28,0:28:69.24:0,69,1745	0/0:42,0:42:99:0,120,2891	1/1:3,16:19:42.14:714,42,0	0/0:34,0:34:87.29:0,87,2115	0/0:20,0:20:45.15:0,45,1138	0/0:38,0:38:96.33:0,96,2393	0/0:25,1:26:14.38:0,14,1488	1/1:4,10:14:27.09:466,27,0	1/1:5,35:40:86.89:1502,87,0	0/0:18,0:18:51.18:0,51,1247	0/0:30,0:30:81.28:0,81,2045	0/0:35,0:35:96.32:0,96,2322	0/0:5,0:5:15.05:0,15,326
chr10	71392597	.	CA	C	4554.29	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.218;DP=545;FS=6.170;HRun=8;HaplotypeScore=52.8757;InbreedingCoeff=0.9896;MQ=64.39;MQ0=0;MQRankSum=0.726;QD=24.35;ReadPosRankSum=1.250;VQSLOD=5.6195;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:22:50.45:471,50,0	1/1:1,8:9:21.03:203,21,0	0/0:12,0:9:14.52:0,15,142	0/0:15,0:10:21.91:0,22,228	0/0:42,0:42:99:0,114,1366	0/0:20,0:20:45.14:0,45,541	0/0:12,0:12:33.10:0,33,399	0/0:31,0:31:58.67:0,59,883	0/0:13,0:13:39.12:0,39,471	1/1:3,23:26:69.11:666,69,0	1/1:1,21:22:63.10:608,63,0	0/0:19,0:19:54.13:0,54,636	1/1:1,17:18:45.07:434,45,0	0/0:16,0:16:36.11:0,36,434	0/0:27,0:27:72.22:0,72,869	0/0:14,0:14:42.13:0,42,507	1/1:0,22:22:66.11:637,66,0	1/1:2,11:13:27.04:261,27,0	0/0:16,0:16:45.14:0,45,543	0/0:31,0:31:81.25:0,81,978	0/0:15,0:15:42.13:0,42,507	0/0:4,0:4:12.04:0,12,145	1/1:1,19:20:51.08:492,51,0	1/1:3,7:10:18.03:174,18,0	1/1:2,23:25:63.10:608,63,0	0/0:28,1:29:49.26:0,49,877	0/0:34,0:34:96.26:0,96,1123	0/0:8,0:8:21.06:0,21,254
chr10	71392979	.	AACAC	A	1320.32	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=4.495;DP=611;FS=2.342;HRun=0;HaplotypeScore=110.5604;InbreedingCoeff=0.8607;MQ=68.69;MQ0=14;MQRankSum=2.763;QD=16.50;ReadPosRankSum=2.716;VQSLOD=3.5757;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:24:8.99:0,9,102	0/0:5,0:4:3.01:0,3,40	./.	0/0:30,0:24:9:0,9,134	0/0:23,0:23:27.06:0,27,519	0/0:28,0:30:50.80:0,51,1007	0/0:21,0:22:38.57:0,39,818	0/0:19,0:19:20.65:0,21,319	0/0:21,0:23:38.85:0,39,793	0/0:27,0:25:51.11:0,51,875	0/0:11,0:14:9.03:0,9,153	0/0:22,0:27:56.40:0,56,1115	1/1:8,21:29:39.05:619,39,0	0/0:21,0:25:35.59:0,36,705	0/0:28,0:31:60.14:0,60,1196	0/0:25,0:28:41.75:0,42,903	0/0:9,0:20:15.02:0,15,252	1/1:7,3:11:9.02:123,9,0	0/0:10,0:9:12.04:0,12,211	0/0:20,0:20:35.91:0,36,776	0/0:30,0:31:44.09:0,44,889	0/0:16,0:17:41.82:0,42,745	1/1:10,8:20:17.65:397,18,0	1/1:8,12:20:21.07:334,21,0	0/0:13,0:11:14.82:0,15,229	0/0:16,0:17:15.86:0,16,618	0/0:35,0:37:39.02:0,39,921	0/0:6,0:5:12.04:0,12,286
chr10	71393876	.	AGAGTGT	A	875.99	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=6.584;DP=463;FS=5.846;HRun=0;HaplotypeScore=105.1750;InbreedingCoeff=0.7046;MQ=61.22;MQ0=16;MQRankSum=-3.110;QD=13.27;ReadPosRankSum=1.733;VQSLOD=2.3752;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:0.17:0,0,51	0/0:8,0:8:14.38:0,14,197	0/0:38,0:15:25.63:0,26,340	0/0:24,0:9:13.30:0,13,158	0/0:21,0:21:56.63:0,57,1387	0/0:17,0:17:48.12:0,48,1285	0/0:11,0:11:18.19:0,18,823	0/0:30,0:29:55.93:0,56,1299	0/0:6,0:6:18.05:0,18,515	0/0:20,0:20:56.55:0,57,851	0/0:11,0:11:9.01:0,9,119	0/0:17,0:17:51.13:0,51,1302	1/1:1,15:16:21.03:457,21,0	0/0:19,0:19:52.76:0,53,1494	0/0:10,0:10:24.08:0,24,701	0/0:15,0:15:42.13:0,42,1313	0/0:26,0:24:48.07:0,48,666	1/1:0,14:16:11.78:240,12,0	0/0:20,0:18:26.71:0,27,1016	0/0:7,0:7:18.05:0,18,541	0/0:21,0:21:57.13:0,57,1487	0/0:5,0:5:15.05:0,15,484	1/1:0,5:5:9.03:219,9,0	1/1:2,8:10:3.01:73,3,0	0/1:19,0:18:34.96:35,0,213	0/0:16,0:16:47.98:0,48,1106	0/0:19,0:19:54.16:0,54,1540	0/0:12,0:12:32.99:0,33,664
chr10	71393878	.	AGT	A	1583.77	PASS	AB=0.935;AC=27;AF=0.482;AN=56;BaseQRankSum=10.027;DP=469;FS=12.359;HRun=0;HaplotypeScore=72.5824;InbreedingCoeff=0.4052;MQ=61.09;MQ0=16;MQRankSum=-0.305;QD=6.02;ReadPosRankSum=3.905;VQSLOD=1.1525;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:24:31.25:154,31,0	1/1:0,7:8:14.86:154,15,0	0/0:38,0:15:5.99:0,6,50	0/0:26,0:8:2.97:0,3,20	0/1:17,4:21:34.17:34,0,357	0/0:17,1:18:3.44:0,3,454	0/1:11,1:12:17.26:17,0,258	0/0:31,0:30:18.27:0,18,350	0/1:6,0:6:4.81:5,0,174	1/1:3,18:21:54.09:577,54,0	1/1:1,10:11:6.01:70,6,0	0/1:15,2:17:28.23:28,0,403	1/1:16,0:16:17.11:87,17,0	0/1:19,0:19:2.34:2,0,475	0/0:10,0:10:24.02:0,24,286	0/0:13,1:14:3.96:0,4,461	1/1:7,17:22:30.09:351,30,0	1/1:16,0:16:11.21:60,11,0	0/0:18,0:17:12.85:0,13,280	0/0:7,0:7:15.02:0,15,187	0/0:21,0:21:50.75:0,51,562	0/0:5,0:5:15.04:0,15,206	1/1:5,0:5:8.52:43,9,0	1/1:9,0:9:2.84:14,3,0	1/1:4,14:18:14.85:142,15,0	0/1:14,2:16:26.65:27,0,342	0/1:19,0:19:8.37:8,0,536	0/0:17,0:17:32.90:0,33,323
chr10	71394967	.	TTTG	T	4002.64	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=13.737;DP=730;FS=5.911;HRun=0;HaplotypeScore=101.1448;InbreedingCoeff=0.9115;MQ=69.38;MQ0=1;MQRankSum=-2.356;QD=27.42;ReadPosRankSum=2.470;VQSLOD=3.6152;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,35:39:81.27:1182,81,0	0/0:8,0:8:21.07:0,21,414	0/0:19,0:16:21.52:0,22,408	0/1:17,0:15:4.19:4,0,345	0/0:35,0:35:75.24:0,75,1471	0/0:30,0:30:84.29:0,84,1675	0/0:23,0:23:57.19:0,57,1162	0/0:36,0:36:78.22:0,78,1428	0/0:24,0:24:66.19:0,66,1291	0/0:18,0:18:39.13:0,39,757	0/0:25,0:25:69.22:0,69,1362	0/0:42,0:42:99:0,120,2425	1/1:4,26:30:69.23:1006,69,0	0/0:23,0:23:57.20:0,57,1180	0/0:32,0:32:72.25:0,72,1491	0/0:18,0:18:48.16:0,48,974	0/0:25,0:25:63.22:0,63,1298	1/1:5,14:19:42.14:618,42,0	0/0:22,0:21:51.17:0,51,962	0/0:30,0:30:69.24:0,69,1373	0/0:33,0:33:90.23:0,90,1702	0/0:32,0:32:84.29:0,84,1738	1/1:4,17:21:38.92:574,39,0	1/1:1,19:20:42.14:618,42,0	0/0:34,0:34:84.29:0,84,1652	0/0:28,0:28:75.26:0,75,1533	0/0:37,0:37:84.29:0,84,1693	0/0:10,0:10:15.05:0,15,292
chr10	71395112	.	CTT	C	2060.31	PASS	AB=0.859;AC=14;AF=0.250;AN=56;BaseQRankSum=7.328;DP=603;FS=16.097;HRun=14;HaplotypeScore=81.5009;InbreedingCoeff=0.6230;MQ=74.45;MQ0=3;MQRankSum=0.391;QD=10.62;ReadPosRankSum=4.078;VQSLOD=0.8409;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,32:41:62.42:652,62,0	0/1:5,1:9:9.36:9,0,129	0/0:26,0:17:13.86:0,14,194	0/1:19,0:14:14.87:15,0,51	0/0:16,2:25:8.20:0,8,540	0/0:15,0:18:37.58:0,38,436	0/1:13,2:17:8.46:8,0,422	0/0:15,1:20:2.05:0,2,382	0/0:17,0:18:39.11:0,39,516	0/0:16,0:17:38.59:0,39,477	0/0:29,0:31:62.55:0,63,899	0/0:25,0:27:68.19:0,68,880	1/1:3,21:26:51.39:456,51,0	0/0:19,0:19:48.13:0,48,622	0/0:20,0:22:53.61:0,54,642	0/0:21,0:24:50.66:0,51,717	0/0:19,1:25:30.46:0,30,592	1/1:5,11:17:32.75:289,33,0	0/0:22,0:27:57.50:0,58,598	0/0:12,0:12:36.10:0,36,485	0/0:15,1:18:14.69:0,15,411	0/0:19,0:23:56.55:0,57,692	1/1:3,19:22:47.80:491,48,0	1/1:2,12:16:35.46:317,35,0	0/0:22,0:27:65.04:0,65,778	0/1:21,1:23:1.73:2,0,545	0/0:21,1:23:25.86:0,26,618	0/0:6,0:7:17.42:0,17,217
chr10	71396506	.	G	GCA	676.90	PASS	AB=0.861;AC=10;AF=0.192;AN=52;BaseQRankSum=-4.672;DP=436;FS=14.123;HRun=0;HaplotypeScore=66.4075;InbreedingCoeff=-0.1241;MQ=63.70;MQ0=8;MQRankSum=-0.264;QD=4.67;ReadPosRankSum=0.923;VQSLOD=0.7209;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:28:2.69:0,3,23	0/0:6,0:8:11.70:0,12,93	./.	./.	0/0:7,0:7:3.01:0,3,32	0/1:13,1:19:24.52:25,0,81	0/0:16,0:19:23.39:0,23,186	0/0:22,0:21:5.06:0,5,47	0/1:10,1:14:21.01:21,0,167	0/0:15,0:14:20.85:0,21,191	0/1:5,1:6:32.75:33,0,63	0/0:11,0:12:17.83:0,18,156	0/1:10,4:14:50.37:119,0,50	0/0:9,0:12:11.85:0,12,104	0/0:19,0:19:14.89:0,15,151	0/0:9,0:12:20.39:0,20,154	0/0:30,0:34:62.34:0,62,573	0/1:11,6:16:50.63:159,0,51	0/0:20,0:21:17.84:0,18,178	0/0:8,0:8:9:0,9,87	0/0:22,0:20:17.82:0,18,177	0/0:8,0:7:13.19:0,13,101	1/1:4,0:4:2.99:23,3,0	0/1:20,13:35:59.02:397,0,59	0/1:13,1:15:24.01:24,0,138	0/0:19,0:19:18.89:0,19,176	0/1:18,0:20:11.23:11,0,260	0/0:8,0:8:2.94:0,3,32
chr10	71396706	.	ACTTC	A	447.09	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.991;DP=331;FS=0.000;HRun=0;HaplotypeScore=56.7065;InbreedingCoeff=0.6619;MQ=92.16;MQ0=0;MQRankSum=-0.736;QD=37.26;ReadPosRankSum=-0.214;VQSLOD=3.3076;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:12:30.10:541,30,0	0/0:6,0:6:12.04:0,12,320	0/0:16,0:16:43.66:0,44,978	0/0:16,0:16:36.92:0,37,945	0/0:19,0:19:54.19:0,54,1440	0/0:25,0:25:72.25:0,72,1920	0/0:5,0:5:15.05:0,15,400	0/0:32,0:32:93.32:0,93,2379	0/0:3,0:3:6.02:0,6,160	0/0:10,0:10:30.10:0,30,800	0/0:12,0:12:29.93:0,30,734	0/0:5,0:5:15.05:0,15,400	0/0:8,0:8:21.07:0,21,560	0/0:4,0:4:12.04:0,12,320	0/0:7,0:7:18.06:0,18,480	0/0:3,0:3:9.03:0,9,240	0/0:29,0:29:51.18:0,51,1328	0/0:18,0:18:48.16:0,48,1263	0/0:17,0:17:48.16:0,48,1254	0/0:10,0:10:30.10:0,30,800	0/0:6,0:6:18.06:0,18,480	0/0:1,0:1:3.01:0,3,80	0/0:7,0:7:18.06:0,18,480	0/0:5,0:5:12.04:0,12,319	0/0:12,0:12:30.10:0,30,800	0/0:10,0:10:30.10:0,30,781	0/0:21,0:21:60.21:0,60,1600	0/0:12,0:12:36.12:0,36,959
chr10	71396774	.	G	GTTTGTTTA	1266.24	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-0.793;DP=290;FS=10.877;HRun=0;HaplotypeScore=68.3040;InbreedingCoeff=0.6798;MQ=61.16;MQ0=1;MQRankSum=1.155;QD=19.48;ReadPosRankSum=-0.151;VQSLOD=1.4373;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:13:29.81:0,30,384	1/1:0,4:4:3.01:131,3,0	0/0:9,0:5:0.67:0,1,42	0/0:3,0:3:0.64:0,1,8	0/0:11,0:11:29.99:0,30,446	0/0:18,0:18:50.98:0,51,919	0/0:2,0:2:6.02:0,6,169	0/0:34,0:33:86.37:0,86,966	0/0:6,0:6:18.02:0,18,328	1/1:10,0:10:26.99:328,27,0	1/1:0,12:14:29.74:560,30,0	0/0:2,0:2:5.99:0,6,50	0/0:5,0:5:11.95:0,12,166	0/0:3,0:3:8.99:0,9,75	0/0:6,0:6:12:0,12,159	0/0:5,0:5:12.03:0,12,265	1/1:0,21:25:3.01:132,3,0	0/0:7,0:14:26.92:0,27,358	0/0:13,0:13:35.71:0,36,628	0/0:10,0:10:27.04:0,27,522	0/0:6,0:6:15.01:0,15,243	0/0:3,0:3:9.03:0,9,254	0/0:3,0:8:11.44:0,11,83	0/0:4,0:4:5.92:0,6,41	1/1:0,10:12:6.02:264,6,0	0/0:18,0:18:45.10:0,45,858	0/0:15,0:15:44.91:0,45,479	0/0:17,0:17:50.96:0,51,980
chr10	71397676	.	CA	C	3583.24	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.604;DP=773;FS=0.841;HRun=2;HaplotypeScore=71.1774;InbreedingCoeff=0.9994;MQ=83.26;MQ0=0;MQRankSum=-5.375;QD=36.94;ReadPosRankSum=2.998;VQSLOD=4.3561;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1792	0/0:15,0:15:42.14:0,42,629	0/0:31,0:31:90.29:0,90,1313	0/0:24,0:24:69.17:0,69,986	0/0:22,0:22:66.21:0,66,969	0/0:24,0:24:72.23:0,72,1048	0/0:31,0:31:90.27:0,90,1320	0/0:29,0:29:87.29:0,87,1304	0/0:22,0:22:66.22:0,66,971	0/0:34,0:34:99:0,102,1504	0/0:17,0:17:48.16:0,48,720	0/0:27,0:27:81.23:0,81,1153	1/1:0,25:25:72.23:935,72,0	0/0:40,0:40:99:0,117,1743	0/0:36,0:36:99:0,108,1596	0/0:30,0:30:90.29:0,90,1324	0/0:28,0:28:84.27:0,84,1232	1/1:0,15:15:45.15:584,45,0	0/0:20,0:20:60.20:0,60,899	0/0:29,0:29:87.28:0,87,1278	0/0:37,0:37:99:0,111,1663	0/0:20,0:20:60.20:0,60,894	1/1:0,20:20:60.20:779,60,0	1/1:1,36:37:99:1285,99,0	0/0:38,0:38:99:0,105,1564	0/0:42,0:42:99:0,126,1888	0/0:32,0:32:96.33:0,96,1438	0/0:8,0:8:24.05:0,24,311
chr10	71398273	.	CTA	C	1604.07	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.299;DP=749;FS=0.611;HRun=0;HaplotypeScore=86.3060;InbreedingCoeff=0.9703;MQ=70.12;MQ0=0;MQRankSum=-4.894;QD=37.30;ReadPosRankSum=2.575;VQSLOD=5.5955;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,42:43:99:1699,111,0	0/0:17,0:17:51.17:0,51,976	0/0:28,0:28:65.75:0,66,1392	0/0:18,0:18:45.14:0,45,789	0/0:32,0:32:93.27:0,93,1680	0/0:22,0:22:66.23:0,66,1263	0/0:21,0:21:44.77:0,45,895	0/0:30,0:30:87.26:0,87,1532	0/0:20,0:20:60.19:0,60,1101	0/0:41,0:41:99:0,120,2296	0/0:23,0:23:69.24:0,69,1317	0/0:36,0:36:99:0,108,2061	0/0:29,0:29:87.28:0,87,1633	0/0:22,0:22:66.23:0,66,1263	0/0:24,0:23:72.23:0,72,1345	0/0:27,0:27:78.23:0,78,1388	0/0:22,0:22:66.20:0,66,1228	0/0:23,0:23:66.18:0,66,1169	0/0:19,0:19:51.16:0,51,943	0/0:27,0:27:75.23:0,75,1371	0/0:34,0:34:99:0,102,1904	0/0:32,0:32:93.32:0,93,1768	0/0:23,0:23:69.21:0,69,1255	0/0:27,0:27:81.28:0,81,1535	0/0:36,0:36:99:0,108,2010	0/0:33,0:33:99:0,99,1832	0/0:35,0:35:99:0,105,1943	0/0:5,0:4:12.04:0,12,230
chr10	71399951	.	C	CTG	749.67	PASS	AB=0.895;AC=12;AF=0.222;AN=54;BaseQRankSum=-4.261;DP=730;FS=8.704;HRun=0;HaplotypeScore=118.3963;InbreedingCoeff=-0.0077;MQ=56.18;MQ0=15;MQRankSum=0.454;QD=2.65;ReadPosRankSum=-2.069;VQSLOD=1.5374;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:44:0.95:38,1,0	0/1:7,0:7:0:0,0,0	./.	0/0:51,0:20:0:0,0,0	0/1:19,0:19:7.94:8,0,145	0/1:18,8:26:32.71:33,0,77	0/0:26,0:29:23.69:0,24,211	0/1:33,0:33:26.25:31,0,26	0/1:25,0:25:1.44:1,0,232	0/0:19,0:24:12.15:0,12,57	0/0:14,0:17:3.31:0,3,15	0/0:29,0:34:23.86:0,24,186	0/1:19,7:27:40.18:118,0,40	0/0:29,0:29:24.06:0,24,262	0/0:29,0:32:35.91:0,36,365	0/0:29,1:32:0.15:0,0,366	0/1:18,0:18:0.53:1,0,30	0/1:13,6:19:2.68:98,0,3	0/1:24,0:24:10.20:10,0,65	0/0:23,0:23:27.96:0,28,271	0/0:34,0:35:29.63:0,30,283	0/0:8,0:8:3.01:0,3,33	0/0:12,0:14:5.68:0,6,28	0/1:18,21:38:20.30:537,0,20	0/0:12,0:22:17.04:0,17,84	0/0:23,0:24:17.65:0,18,146	0/0:17,0:17:26.46:0,26,228	0/0:12,0:11:21.02:0,21,217
chr10	71401578	.	T	TA	1523.53	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.511;DP=779;FS=0.000;HRun=1;HaplotypeScore=70.8146;InbreedingCoeff=0.9443;MQ=92.40;MQ0=0;MQRankSum=-4.781;QD=39.06;ReadPosRankSum=1.446;VQSLOD=4.2402;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:99:1618,108,0	0/0:10,0:10:27.09:0,27,351	0/0:37,0:37:99:0,108,1348	0/0:27,0:27:72.20:0,72,909	0/0:40,0:40:99:0,120,1527	0/0:21,0:21:60.18:0,60,764	0/0:19,0:19:51.15:0,51,646	0/0:43,0:43:99:0,117,1503	0/0:21,0:21:63.20:0,63,817	0/0:26,0:26:78.19:0,78,980	0/0:24,0:24:72.23:0,72,935	0/0:36,0:36:99:0,102,1321	0/0:33,0:33:96.31:0,96,1245	0/0:24,0:24:69.19:0,69,867	0/0:39,0:39:99:0,117,1489	0/0:22,0:22:65.58:0,66,826	0/0:26,0:26:78.25:0,78,1012	0/0:13,0:13:36.12:0,36,465	0/0:35,0:35:96.22:0,96,1210	0/0:28,0:28:84.27:0,84,1091	0/0:40,0:40:99:0,114,1450	0/0:26,0:26:72.23:0,72,935	0/0:20,0:20:57.19:0,57,739	0/0:25,0:25:69.20:0,69,880	0/0:21,0:20:63.20:0,63,804	0/0:42,1:43:84.44:0,84,1588	0/0:37,0:37:99:0,111,1424	0/0:4,0:4:9.03:0,9,117
chr10	71402325	.	AC	A	576.48	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.622;DP=683;FS=3.332;HRun=1;HaplotypeScore=61.7469;InbreedingCoeff=0.9880;MQ=86.52;MQ0=0;MQRankSum=-1.522;QD=36.03;ReadPosRankSum=0.425;VQSLOD=3.6896;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:48.16:671,48,0	0/0:7,0:7:21.02:0,21,264	0/0:21,0:21:53.48:0,53,875	0/0:23,0:24:67.05:0,67,1011	0/0:28,0:28:84.29:0,84,1343	0/0:32,0:32:96.31:0,96,1511	0/0:16,0:16:48.16:0,48,767	0/0:26,0:26:78.27:0,78,1246	0/0:25,0:25:72.23:0,72,1125	0/0:42,0:42:99:0,123,1926	0/0:34,0:34:99:0,99,1551	0/0:26,0:26:78.25:0,78,1224	0/0:35,0:35:99:0,105,1652	0/0:21,0:21:63.20:0,63,983	0/0:30,0:30:90.31:0,90,1436	0/0:29,0:29:87.30:0,87,1388	0/0:23,0:23:66.20:0,66,1028	0/0:15,0:15:45.15:0,45,718	0/0:18,0:18:54.16:0,54,835	0/0:35,0:35:99:0,105,1652	0/0:30,0:30:90.29:0,90,1411	0/0:30,0:30:90.31:0,90,1438	0/0:19,0:19:57.19:0,57,911	0/0:19,0:19:57.19:0,57,911	0/0:23,0:23:69.24:0,69,1103	0/0:27,0:27:81.28:0,81,1293	0/0:26,0:26:78.27:0,78,1246	0/0:6,0:6:18.06:0,18,288
chr10	71405614	.	AAAAT	A	761.95	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=4.378;DP=343;FS=0.884;HRun=0;HaplotypeScore=57.9552;InbreedingCoeff=0.7276;MQ=63.69;MQ0=0;MQRankSum=1.605;QD=14.94;ReadPosRankSum=-0.640;VQSLOD=2.5470;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:19:24.06:0,24,408	1/1:4,5:9:8.86:84,9,0	0/0:7,0:4:3.01:0,3,37	0/0:10,0:8:5.98:0,6,55	0/0:15,0:15:27.03:0,27,380	0/0:17,0:17:45.10:0,45,982	0/0:5,0:5:3.01:0,3,75	0/0:45,0:45:96.17:0,96,1394	0/0:10,0:10:9.02:0,9,176	1/1:4,5:9:15.02:200,15,0	1/1:5,0:5:3:25,3,0	0/0:8,0:8:12.01:0,12,156	0/0:12,0:12:24.04:0,24,323	0/0:11,0:11:18.03:0,18,335	0/0:10,0:10:15.04:0,15,278	0/0:9,0:9:12.02:0,12,202	1/1:1,15:16:21.07:354,21,0	0/0:20,0:18:36.08:0,36,585	0/0:15,0:15:27.07:0,27,508	0/0:11,0:11:6.01:0,6,102	0/0:3,0:3:9.02:0,9,173	./.	0/0:9,0:8:9.02:0,9,107	0/0:4,0:4:3:0,3,26	1/1:2,10:12:15.05:253,15,0	0/0:13,0:13:21.04:0,21,333	0/0:28,0:27:48.10:0,48,858	0/0:6,0:6:18.06:0,18,448
chr10	71407050	.	G	GGAGAGAGAGAGAGAGAGAGA	572.75	PASS	AB=0.944;AC=10;AF=0.192;AN=52;BaseQRankSum=1.223;DP=193;FS=30.701;HRun=0;HaplotypeScore=87.8020;InbreedingCoeff=0.3736;MQ=84.16;MQ0=4;MQRankSum=-1.698;QD=7.95;ReadPosRankSum=-1.479;VQSLOD=0.0165;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:7:0:0,0,0	./.	0/0:26,0:5:3.01:0,3,66	0/1:28,0:14:9.39:9,0,78	0/0:5,0:5:15.05:0,15,567	0/0:8,0:8:24.07:0,24,1064	0/0:3,0:4:9.01:0,9,347	0/0:17,0:17:36.11:0,36,1388	0/0:3,0:3:9.03:0,9,482	0/0:8,0:8:15.05:0,15,614	0/0:4,0:4:6.02:0,6,322	0/0:6,0:6:15.05:0,15,598	1/1:1,6:11:3.01:280,3,0	0/0:5,0:5:15.05:0,15,713	0/0:3,0:3:5.46:0,5,226	0/0:5,0:5:15.05:0,15,624	0/1:10,0:11:9.36:9,0,697	1/1:3,0:4:5.99:111,6,0	0/0:3,0:3:6:0,6,75	0/0:4,0:4:3.01:0,3,142	0/0:6,0:6:18.06:0,18,783	0/0:3,0:3:9.03:0,9,292	0/1:5,0:6:0.04:0,0,0	1/1:0,0:2:3.01:280,3,0	0/0:3,0:3:9.03:0,9,484	0/0:6,0:6:18.06:0,18,929	0/0:2,0:2:6.02:0,6,320	./.
chr10	71407360	.	A	AC	571.22	PASS	AB=0.619;AC=9;AF=0.161;AN=56;BaseQRankSum=0.271;DP=467;FS=4.517;HRun=9;HaplotypeScore=50.6914;InbreedingCoeff=0.7232;MQ=72.02;MQ0=1;MQRankSum=-1.072;QD=8.65;ReadPosRankSum=1.040;VQSLOD=1.3642;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:14:6.19:30,6,0	0/0:6,0:6:10.16:0,10,73	0/0:16,1:14:26.92:0,27,222	0/0:18,0:16:21.55:0,22,199	0/0:8,0:8:4.96:0,5,140	0/0:19,0:19:53.96:0,54,461	0/0:18,0:18:38.98:0,39,338	0/0:26,0:27:46.42:0,46,379	0/0:17,0:17:44.93:0,45,385	0/0:15,0:15:41.98:0,42,360	0/0:10,0:10:18.83:0,19,154	0/0:18,0:18:35.05:0,35,393	1/1:6,10:17:10.22:187,10,0	0/0:29,0:30:37.01:0,37,519	0/0:16,0:16:35.96:0,36,308	0/0:25,0:25:71.98:0,72,623	0/0:20,0:20:53.26:0,53,462	1/1:0,6:6:18.05:199,18,0	0/0:21,1:22:8.42:0,8,276	0/0:13,1:14:18.99:0,19,150	0/0:26,0:26:62.93:0,63,535	0/0:5,0:6:6.09:0,6,99	1/1:5,9:16:12.01:131,12,0	0/1:5,8:13:28.04:175,0,28	0/0:16,0:16:9.33:0,9,221	0/0:29,0:29:80.70:0,81,673	0/0:17,0:17:41.98:0,42,364	0/0:6,0:6:14.97:0,15,126
chr10	71407685	.	G	GGT	1282.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.371;DP=716;FS=8.975;HRun=0;HaplotypeScore=86.3466;InbreedingCoeff=0.9986;MQ=64.86;MQ0=0;MQRankSum=-0.941;QD=30.54;ReadPosRankSum=1.291;VQSLOD=5.4979;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,36:42:81.16:1378,81,0	0/0:13,0:13:36.12:0,36,468	0/0:22,0:19:27.12:0,27,443	0/0:32,0:27:57.15:0,57,756	0/0:22,0:22:60.19:0,60,780	0/0:21,0:21:57.16:0,57,712	0/0:19,0:19:57.19:0,57,741	0/0:53,0:53:99:0,138,1736	0/0:22,0:22:60.19:0,60,779	0/0:24,0:24:66.20:0,66,843	0/0:17,0:17:42.14:0,42,546	0/0:34,0:34:81.25:0,81,1041	0/0:22,0:22:54.17:0,54,700	0/0:27,0:27:69.20:0,69,881	0/0:24,0:24:66.20:0,66,844	0/0:21,0:21:57.17:0,57,727	0/0:32,0:32:93.29:0,93,1196	0/0:21,0:21:62.01:0,62,785	0/0:18,0:17:39.11:0,39,482	0/0:20,0:20:57.19:0,57,741	0/0:46,0:46:99:0,126,1605	0/0:24,0:24:66.21:0,66,858	0/0:18,0:18:48.16:0,48,624	0/0:33,0:33:90.25:0,90,1152	0/0:18,0:18:51.17:0,51,663	0/0:28,0:28:72.23:0,72,936	0/0:30,0:29:78.24:0,78,997	0/0:13,0:13:36.12:0,36,468
chr10	71409228	.	G	GTTCCAT	11943.93	PASS	AB=0.591;AC=15;AF=0.268;AN=56;BaseQRankSum=10.790;DP=756;FS=1.516;HRun=0;HaplotypeScore=157.9460;InbreedingCoeff=0.4931;MQ=88.25;MQ0=0;MQRankSum=-17.519;QD=51.93;ReadPosRankSum=1.898;VQSLOD=5.2289;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,35:49:84.29:2929,84,0	1/1:3,0:10:10.09:594,10,0	0/0:24,0:24:69.19:0,69,1460	0/0:37,0:37:99:0,101,2253	0/0:20,0:20:59.34:0,59,1206	0/0:14,0:14:42.13:0,42,981	0/0:32,0:32:96.25:0,96,2088	0/0:40,0:40:99:0,120,2847	0/0:30,0:30:90.29:0,90,2146	0/1:11,0:26:99:1272,0,132	0/1:5,0:18:16.85:743,0,17	0/0:25,0:25:72.21:0,72,1641	0/1:4,0:24:8.76:1460,0,9	0/0:26,0:26:78.24:0,78,1862	0/0:51,0:51:99:0,150,3443	0/0:25,0:25:75.26:0,75,1917	1/1:8,0:23:1.15:940,1,0	0/1:4,0:13:29.83:723,0,30	0/0:25,0:25:75.15:0,75,1554	0/0:23,0:23:66.16:0,66,1397	0/0:60,0:60:99:0,180,4070	0/0:10,0:10:27.05:0,27,536	1/1:3,0:19:42.14:1202,42,0	0/1:9,0:26:7.89:611,0,8	1/1:2,0:21:6.24:1471,6,0	0/0:39,0:40:32.56:0,33,2567	0/0:39,0:38:99:0,117,2606	0/0:5,0:5:15.04:0,15,332
chr10	71409549	.	AT	A	840.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.676;DP=602;FS=2.666;HRun=4;HaplotypeScore=60.4260;InbreedingCoeff=0.9908;MQ=83.95;MQ0=0;MQRankSum=-3.773;QD=25.48;ReadPosRankSum=2.383;VQSLOD=2.5592;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:78.24:936,78,0	0/0:12,0:12:36.12:0,36,504	0/0:22,0:22:54.15:0,54,716	0/0:15,0:15:42.14:0,42,566	0/0:23,0:23:63.21:0,63,881	0/0:25,0:25:75.20:0,75,1010	0/0:14,0:14:42.13:0,42,571	0/0:31,0:31:81.25:0,81,1102	0/0:15,0:15:42.14:0,42,588	0/0:25,0:25:72.24:0,72,1008	0/0:21,0:21:57.19:0,57,797	0/0:27,0:27:78.26:0,78,1092	0/0:25,0:25:75.25:0,75,1049	0/0:17,0:17:48.16:0,48,661	0/0:21,0:21:63.20:0,63,865	0/0:11,0:11:30.10:0,30,420	0/0:35,0:35:96.27:0,96,1317	0/0:14,0:14:39.09:0,39,524	0/0:19,0:19:57.18:0,57,782	0/0:34,0:34:99:0,102,1412	0/0:21,0:21:63.19:0,63,862	0/0:19,0:19:51.17:0,51,714	0/0:19,0:19:57.19:0,57,798	0/0:11,0:11:30.10:0,30,419	0/0:20,0:20:60.20:0,60,839	0/0:37,1:38:78.36:0,78,1500	0/0:29,0:29:81.27:0,81,1134	0/0:6,0:6:18.06:0,18,252
chr10	71410242	.	AT	A	281.26	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=4.855;DP=356;FS=13.708;HRun=7;HaplotypeScore=43.3479;InbreedingCoeff=0.6994;MQ=74.28;MQ0=1;MQRankSum=-2.717;QD=4.33;ReadPosRankSum=-1.511;VQSLOD=-0.6222;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,5:12:6.01:61,6,0	0/0:4,0:4:9.03:0,9,113	0/0:20,0:14:20.09:0,20,172	0/1:24,0:17:35.58:36,0,96	0/0:13,0:13:39.12:0,39,487	0/0:19,0:19:54.17:0,54,679	0/0:12,0:12:36.07:0,36,434	0/0:32,0:32:87.28:0,87,1089	0/0:8,0:8:24.08:0,24,302	0/0:18,0:18:51.16:0,51,630	0/0:10,0:10:30.10:0,30,374	0/0:9,0:9:27.07:0,27,325	1/1:1,8:9:18.04:183,18,0	0/0:14,0:14:36.11:0,36,451	0/0:17,0:17:51.16:0,51,640	0/0:8,0:8:21.07:0,21,264	0/0:22,0:21:57.18:0,57,717	1/1:1,3:4:9.02:92,9,0	0/0:19,0:19:51.15:0,51,627	0/0:8,0:8:24.08:0,24,302	0/0:3,0:3:3.01:0,3,37	0/0:4,0:4:12.04:0,12,149	1/1:7,1:8:3:31,3,0	1/1:6,2:8:2.69:30,3,0	0/0:19,0:19:51.16:0,51,639	0/0:17,0:17:48.15:0,48,604	0/0:10,0:10:30.10:0,30,377	0/0:5,0:5:15.05:0,15,189
chr10	71410422	.	G	GT	697.32	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.522;DP=404;FS=7.314;HRun=6;HaplotypeScore=41.6131;InbreedingCoeff=0.8050;MQ=63.01;MQ0=3;MQRankSum=-0.821;QD=24.90;ReadPosRankSum=0.696;VQSLOD=2.7403;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:27:63.20:792,63,0	0/0:6,0:6:15.03:0,15,153	0/0:18,0:10:24.93:0,25,244	0/0:23,0:15:32.52:0,33,294	0/0:11,0:11:24.05:0,24,244	0/0:14,0:14:36.08:0,36,367	0/0:10,0:10:27.04:0,27,268	0/0:27,0:27:69.15:0,69,704	0/0:9,0:9:27.06:0,27,275	0/0:9,0:9:24.05:0,24,245	0/0:11,0:11:30.06:0,30,305	0/0:13,0:13:39.09:0,39,398	0/0:16,0:16:44.90:0,45,456	0/0:17,0:17:45.10:0,45,459	0/0:25,0:25:69.16:0,69,704	0/0:12,0:12:33.01:0,33,324	0/0:21,0:21:48.10:0,48,490	0/0:15,0:15:42.09:0,42,428	0/0:21,0:21:57.12:0,57,576	0/0:5,0:5:15.03:0,15,153	0/0:12,0:12:27.06:0,27,275	0/0:5,0:5:15.03:0,15,153	0/0:11,0:10:21.86:0,22,268	0/0:27,0:27:69.09:0,69,691	0/0:8,0:8:24.01:0,24,228	0/0:19,0:19:45.09:0,45,454	0/0:10,0:10:24.05:0,24,245	0/0:1,0:1:3.01:0,3,30
chr10	71410824	.	G	GTTGT	4275.58	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.323;DP=541;FS=11.243;HRun=0;HaplotypeScore=96.8751;InbreedingCoeff=0.9971;MQ=80.20;MQ0=5;MQRankSum=-4.457;QD=46.47;ReadPosRankSum=1.710;VQSLOD=5.3710;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,12:16:39.11:854,39,0	0/0:7,0:7:21.05:0,21,330	0/0:40,0:31:59.92:0,60,881	0/0:43,0:35:34.85:0,35,714	0/0:16,0:16:45.14:0,45,729	0/0:18,0:18:45.15:0,45,777	0/0:21,0:21:54.18:0,54,909	0/0:28,0:28:60.19:0,60,975	0/0:10,0:10:27.08:0,27,441	0/0:22,0:21:57.18:0,57,946	0/0:12,0:12:30.10:0,30,526	0/0:17,0:17:45.15:0,45,774	1/1:4,16:21:36.12:904,36,0	0/0:12,0:12:33.11:0,33,571	0/0:23,0:23:63.22:0,63,1099	0/0:19,0:19:51.17:0,51,871	0/0:31,0:31:90.29:0,90,1528	1/1:4,14:18:36.12:910,36,0	0/0:14,0:14:39.10:0,39,632	0/0:22,0:22:57.17:0,57,922	0/0:15,0:15:39.12:0,39,653	0/0:10,0:10:26.88:0,27,447	1/1:1,13:15:36.12:871,36,0	1/1:2,16:20:30.03:737,30,0	0/0:12,0:12:24.08:0,24,414	0/0:23,0:23:54.17:0,54,919	0/0:23,0:23:66.21:0,66,1108	0/0:8,0:8:24.07:0,24,395
chr10	71410852	.	GTTTTTTTT	G	283.58	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=5.834;DP=571;FS=7.122;HRun=8;HaplotypeScore=153.8323;InbreedingCoeff=0.6206;MQ=68.90;MQ0=13;MQRankSum=-3.263;QD=9.45;ReadPosRankSum=-2.865;VQSLOD=-0.4026;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,6:15:23.90:334,24,0	0/0:9,0:9:27.04:0,27,811	0/0:46,0:22:49.92:0,50,738	0/0:44,0:25:51.25:0,51,691	0/0:19,0:19:57.09:0,57,1991	0/0:17,0:17:49.41:0,49,1736	0/0:21,0:22:63.19:0,63,2303	0/0:30,0:29:79.16:0,79,2523	0/0:16,0:16:48.15:0,48,2105	0/0:25,0:23:69.23:0,69,2760	0/0:15,0:15:45.14:0,45,1799	0/0:16,0:16:48.15:0,48,1764	0/0:14,0:14:24.16:0,24,1221	0/0:11,0:11:33.11:0,33,1213	0/0:24,0:24:72.19:0,72,2491	0/0:17,0:17:51.18:0,51,2107	0/0:30,0:30:85.11:0,85,3116	0/1:15,0:15:54.64:55,0,603	0/0:14,0:12:33.97:0,34,1052	0/0:18,0:17:51.15:0,51,2017	0/0:17,0:16:48.13:0,48,1733	0/0:15,0:15:39.12:0,39,1544	0/0:21,0:21:22.26:0,22,1348	0/0:20,0:20:9.84:0,10,1246	0/0:11,0:11:33.10:0,33,1254	0/0:25,0:25:75.21:0,75,2656	0/0:33,0:33:93.26:0,93,3605	0/0:10,0:10:30.02:0,30,897
chr10	71411998	.	CCACA	C	298.07	PASS	AC=12;AF=0.286;AN=42;BaseQRankSum=2.980;DP=424;FS=10.477;HRun=0;HaplotypeScore=95.7467;InbreedingCoeff=0.5985;MQ=30.44;MQ0=103;MQRankSum=-2.464;QD=3.51;ReadPosRankSum=1.872;VQSLOD=0.9686;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:9.03:0,9,152	1/1:2,0:3:3:28,3,0	./.	./.	0/0:8,0:8:3.01:0,3,65	./.	0/0:15,0:11:9.03:0,9,202	./.	0/0:15,0:14:8.77:0,9,150	./.	./.	0/0:23,0:21:18.06:0,18,419	1/1:19,4:19:11.63:183,12,0	0/0:13,0:12:6.02:0,6,132	0/0:15,0:15:9.03:0,9,146	0/0:16,0:14:9.03:0,9,210	./.	1/1:11,2:9:2.32:45,2,0	1/1:17,0:14:3:29,3,0	0/0:11,0:11:3.01:0,3,66	0/0:20,0:13:8.62:0,9,131	0/0:21,0:16:9.03:0,9,200	1/1:13,1:12:6.02:92,6,0	0/0:18,0:16:16.88:0,17,136	1/1:12,0:13:6.01:56,6,0	0/0:18,0:16:11.32:0,11,156	0/0:18,0:15:11.79:0,12,173	0/0:6,0:4:5.99:0,6,91
chr10	71414168	.	GC	G	1012.60	PASS	AB=0.888;AC=27;AF=0.500;AN=54;BaseQRankSum=4.028;DP=323;FS=23.141;HRun=12;HaplotypeScore=41.7082;InbreedingCoeff=0.3825;MQ=72.64;MQ0=7;MQRankSum=-0.681;QD=5.36;ReadPosRankSum=4.581;VQSLOD=0.2184;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:32.59:95,33,0	1/1:1,4:6:7.02:70,7,0	0/0:32,1:15:21.09:0,21,125	0/0:22,0:11:1.01:0,1,28	0/1:3,1:5:11.40:11,0,63	0/0:9,0:9:18.01:0,18,169	0/1:14,5:19:4.42:4,0,311	0/1:15,0:16:44.48:44,0,99	0/1:6,0:7:1.57:2,0,50	1/1:5,7:12:20.42:148,20,0	1/1:2,5:7:2.97:23,3,0	0/0:11,1:12:1.59:0,2,167	1/1:2,6:8:8.96:69,9,0	0/1:5,0:5:11.17:11,0,79	0/1:10,1:11:8.84:9,0,166	0/0:7,0:8:12.02:0,12,121	1/1:3,16:19:29:230,29,0	1/1:3,7:11:16.98:122,17,0	0/0:17,1:18:2.72:0,3,250	./.	0/1:9,3:12:2.22:2,0,144	0/0:4,0:4:5.03:0,5,31	1/1:3,2:5:8.89:63,9,0	1/1:2,14:16:26.88:208,27,0	1/1:8,0:7:11.82:78,12,0	0/0:9,0:9:15.30:0,15,115	0/0:11,1:12:5.02:0,5,208	0/0:6,0:6:14.94:0,15,131
chr10	71414177	.	CCCCA	C	757.96	PASS	AB=1.000;AC=3;AF=0.056;AN=54;BaseQRankSum=2.179;DP=354;FS=0.000;HRun=0;HaplotypeScore=61.3010;InbreedingCoeff=0.5813;MQ=76.34;MQ0=8;MQRankSum=-0.277;QD=18.49;ReadPosRankSum=3.447;VQSLOD=3.0709;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:48.12:851,48,0	0/0:6,0:6:15.04:0,15,213	0/0:40,0:18:14.97:0,15,440	0/1:21,0:10:5.89:6,0,135	0/0:8,0:8:18.04:0,18,316	0/0:11,0:11:33.06:0,33,583	0/0:19,0:19:37.82:0,38,1059	0/0:18,0:18:48.02:0,48,693	0/0:5,0:5:12.51:0,13,208	0/0:11,0:10:29.94:0,30,365	0/0:6,0:6:14.90:0,15,166	0/0:12,0:12:33.10:0,33,697	0/0:9,0:9:15.04:0,15,199	0/0:6,0:6:15.04:0,15,310	0/0:12,0:12:36.10:0,36,705	0/0:10,0:10:24.05:0,24,455	0/0:24,0:24:54:0,54,679	0/0:10,0:10:24.01:0,24,295	0/0:20,0:20:48.90:0,49,939	./.	0/0:13,0:13:6.66:0,7,504	0/0:5,0:5:12.01:0,12,157	0/0:7,0:7:19.27:0,19,209	0/0:18,0:18:39.07:0,39,505	0/0:8,0:7:23.91:0,24,194	0/0:13,0:13:37.63:0,38,577	0/0:15,0:15:45.02:0,45,836	0/0:6,0:6:18.06:0,18,406
chr10	71414491	.	TTG	T	583.76	PASS	AB=0.916;AC=16;AF=0.320;AN=50;BaseQRankSum=3.227;DP=397;FS=5.366;HRun=0;HaplotypeScore=58.7425;InbreedingCoeff=0.2785;MQ=51.49;MQ0=14;MQRankSum=1.455;QD=3.19;ReadPosRankSum=2.897;VQSLOD=0.9810;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:20:2.14:2,0,74	1/1:4,1:5:3.01:33,3,0	./.	./.	0/0:15,0:14:11.98:0,12,139	0/1:21,1:21:18.20:18,0,111	0/1:10,1:11:14.78:15,0,202	0/0:32,0:29:9.03:0,9,113	0/0:5,0:5:6:0,6,68	1/1:14,4:18:3.51:112,4,0	1/1:8,5:13:17.84:163,18,0	0/0:8,0:7:9.03:0,9,135	0/0:11,0:11:4.40:0,4,28	0/0:6,0:5:12.04:0,12,178	0/0:9,0:9:14.98:0,15,197	0/1:5,3:8:50.63:51,0,119	1/1:16,9:25:20.39:210,20,0	0/0:18,0:19:23.03:0,23,165	0/1:15,2:15:47.59:48,0,158	0/0:9,0:9:21.07:0,21,308	0/0:19,0:19:15.13:0,15,323	0/0:8,0:7:15.05:0,15,220	./.	0/0:7,0:6:5.84:0,6,70	1/1:9,7:17:6.02:66,6,0	0/1:23,0:23:24.43:24,0,193	0/0:29,0:28:25.02:0,25,510	0/0:3,0:3:3.01:0,3,32
chr10	71419316	.	TA	T	1315.19	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=8.312;DP=373;FS=0.678;HRun=1;HaplotypeScore=37.5637;InbreedingCoeff=0.8998;MQ=69.43;MQ0=0;MQRankSum=0.155;QD=34.61;ReadPosRankSum=0.049;VQSLOD=3.0924;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.21:0,69,1055	0/0:6,0:6:18.06:0,18,282	0/0:4,0:4:1.98:0,2,50	0/0:4,0:4:11.62:0,12,123	0/0:21,0:21:63.20:0,63,955	0/0:20,0:20:60.19:0,60,916	0/0:3,0:3:9.03:0,9,139	0/0:34,0:34:99:0,102,1531	0/0:11,0:11:33.10:0,33,494	0/0:17,0:17:51.16:0,51,759	0/0:15,0:15:45.15:0,45,697	0/0:13,0:13:39.13:0,39,610	1/1:0,11:11:30.10:420,30,0	0/0:11,0:11:33.10:0,33,493	0/0:7,0:7:21.07:0,21,328	0/0:9,0:9:27.08:0,27,400	0/0:28,0:28:84.29:0,84,1306	1/1:0,18:18:51.17:713,51,0	0/0:18,0:18:54.18:0,54,825	0/0:8,0:8:24.08:0,24,375	0/0:8,0:8:24.06:0,24,352	./.	1/1:0,4:4:12.04:168,12,0	1/1:0,5:5:12.04:168,12,0	0/0:26,0:26:78.25:0,78,1198	0/0:23,0:23:69.23:0,69,1080	0/0:13,0:13:39.13:0,39,608	0/0:13,0:13:39.13:0,39,595
chr10	71421921	.	ATTT	A	2183.19	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.351;DP=525;FS=1.032;HRun=13;HaplotypeScore=95.5197;InbreedingCoeff=0.9531;MQ=63.87;MQ0=7;MQRankSum=-0.493;QD=18.50;ReadPosRankSum=5.109;VQSLOD=2.6483;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,30:38:62.91:720,63,0	0/0:14,0:14:39.09:0,39,632	0/0:28,0:17:22.63:0,23,335	0/0:18,0:10:6.02:0,6,66	0/0:14,0:16:42.09:0,42,673	0/0:31,0:32:76.72:0,77,1286	0/0:9,0:10:30.06:0,30,445	0/0:28,0:29:66.15:0,66,1056	0/0:12,0:12:36.08:0,36,621	0/0:14,0:13:20.97:0,21,264	0/0:21,0:22:57.76:0,58,762	0/0:21,0:21:56.83:0,57,956	1/1:5,16:21:39.06:460,39,0	0/0:12,0:12:30.04:0,30,459	0/0:17,0:17:44.98:0,45,741	0/0:13,0:13:32.70:0,33,499	0/0:32,0:35:96.29:0,96,1693	1/1:4,16:20:33.01:383,33,0	0/0:19,0:20:54.05:0,54,773	0/0:15,0:14:30.08:0,30,484	0/0:4,0:4:12:0,12,178	0/0:10,0:11:24.07:0,24,372	1/1:4,17:20:38.89:451,39,0	1/1:2,14:16:29.96:345,30,0	0/0:20,0:20:51.09:0,51,808	0/0:21,0:21:56.38:0,56,861	0/0:19,0:19:36.11:0,36,632	0/0:3,0:3:8.90:0,9,122
chr10	71424538	.	AACACATGCATGCAC	A	763.84	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=3.361;DP=791;FS=9.282;HRun=0;HaplotypeScore=311.3304;InbreedingCoeff=0.9048;MQ=63.60;MQ0=2;MQRankSum=-1.852;QD=19.59;ReadPosRankSum=0.492;VQSLOD=0.7843;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,5:39:36.12:858,36,0	0/0:14,0:14:30.10:0,30,1950	./.	0/0:14,0:12:8.06:0,8,125	0/0:26,0:26:60.21:0,60,3727	0/0:23,0:23:48.16:0,48,2705	0/0:47,0:47:69.15:0,69,2350	0/0:25,0:25:24.08:0,24,708	0/0:17,0:17:39.13:0,39,2381	0/0:32,0:32:60.21:0,60,3094	0/0:20,0:20:33.11:0,33,2121	0/0:31,0:31:69.24:0,69,4292	0/0:31,0:31:66.23:0,66,3030	0/0:31,0:31:72.23:0,72,4488	0/0:32,0:32:63.22:0,63,3843	0/0:35,0:35:75.24:0,75,4412	0/0:40,0:40:66.23:0,66,3428	0/0:29,0:29:57.17:0,57,2435	0/0:18,0:18:30.10:0,30,1607	0/0:25,0:25:42.13:0,42,2446	0/0:75,0:76:99:0,135,6887	0/0:24,0:24:57.20:0,57,3694	0/0:32,0:32:63.20:0,63,2593	0/0:35,0:35:49.05:0,49,2079	0/0:25,0:25:66.23:0,66,3905	0/0:24,0:24:48.16:0,48,2965	0/0:27,0:27:60.21:0,60,3738	0/0:5,0:5:12.04:0,12,806
chr10	71424565	.	AC	A	3684.14	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.603;DP=753;FS=2.475;HRun=1;HaplotypeScore=94.5479;InbreedingCoeff=0.9907;MQ=59.20;MQ0=3;MQRankSum=-1.303;QD=34.43;ReadPosRankSum=1.113;VQSLOD=3.5842;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:70.90:0,71,1082	0/0:13,0:13:39.13:0,39,623	0/0:12,0:8:23.09:0,23,297	0/0:19,0:16:33.59:0,34,558	0/0:32,0:32:93.32:0,93,1477	0/0:22,0:22:66.23:0,66,1055	0/0:36,0:36:99:0,102,1614	0/0:32,0:32:96.33:0,96,1523	0/0:21,0:21:63.20:0,63,983	0/0:31,0:30:87.30:0,87,1369	0/0:19,0:19:57.19:0,57,911	0/0:33,0:33:99:0,99,1553	1/1:1,29:30:81.16:1054,81,0	0/0:29,0:29:87.28:0,87,1358	0/0:30,0:30:90.29:0,90,1382	0/0:32,0:32:93.32:0,93,1468	0/0:33,0:33:99:0,99,1533	1/1:0,24:24:63.21:879,63,0	0/0:28,0:28:84.26:0,84,1286	0/0:19,0:19:54.18:0,54,863	0/0:65,0:65:99:0,193,3027	0/0:23,0:23:66.22:0,66,1045	1/1:1,27:28:75.16:999,75,0	1/1:0,25:24:57.12:752,57,0	0/0:30,0:30:90.30:0,90,1417	0/0:21,0:21:60.20:0,60,959	0/0:31,0:31:90.31:0,90,1411	0/0:4,0:4:12.04:0,12,192
chr10	71424615	.	T	TC	1459.32	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.833;DP=606;FS=0.000;HRun=0;HaplotypeScore=84.2889;InbreedingCoeff=0.9652;MQ=72.87;MQ0=0;MQRankSum=-3.260;QD=18.95;ReadPosRankSum=2.177;VQSLOD=5.6573;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:78.33:0,78,407	0/0:9,0:9:27.09:0,27,377	0/0:17,0:17:37.46:0,37,404	0/0:10,0:10:13.81:0,14,120	0/0:32,0:32:87.08:0,87,1185	0/0:21,0:21:63.20:0,63,865	0/0:12,0:12:33.11:0,33,461	0/0:34,0:34:99:0,102,1406	0/0:17,0:17:51.16:0,51,698	0/0:26,0:26:78.25:0,78,1056	0/0:16,0:16:45.15:0,45,621	0/0:25,0:25:72.23:0,72,987	1/1:6,13:19:42.32:467,42,0	0/0:28,0:28:84.27:0,84,1152	0/0:27,0:27:81.27:0,81,1132	0/0:14,0:14:39.12:0,39,528	0/0:31,0:31:90.28:0,90,1238	1/1:2,11:14:36.13:382,36,0	0/0:28,0:28:81.26:0,81,1105	0/0:20,0:20:54.17:0,54,723	0/0:23,0:23:63.20:0,63,860	0/0:11,0:11:33.09:0,33,430	1/1:10,11:23:37.51:396,38,0	1/1:3,18:20:32.12:374,32,0	0/0:30,0:30:87.24:0,87,1164	0/0:25,0:25:72.21:0,72,969	0/0:35,0:35:99:0,102,1390	0/0:2,0:2:6.02:0,6,84
chr10	71424617	.	A	AT	2723.33	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.328;DP=595;FS=7.984;HRun=8;HaplotypeScore=75.1652;InbreedingCoeff=0.9616;MQ=71.46;MQ0=0;MQRankSum=-2.133;QD=24.53;ReadPosRankSum=0.752;VQSLOD=4.3077;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:34:93.28:1070,93,0	0/0:11,0:11:24:0,24,219	0/0:13,0:13:17.99:0,18,163	0/0:8,0:8:9.87:0,10,78	0/0:33,1:34:55.33:0,55,743	0/0:20,0:20:51.03:0,51,467	0/0:11,0:11:30.02:0,30,275	0/0:33,0:33:72:0,72,650	0/0:16,0:16:48.03:0,48,439	0/0:25,0:25:59.97:0,60,541	0/0:18,0:18:38.75:0,39,341	0/0:23,0:23:57.03:0,57,522	1/1:19,0:19:48.09:523,48,0	0/0:31,0:31:56.98:0,57,521	0/0:27,0:27:72.02:0,72,654	0/0:13,0:13:36.01:0,36,325	0/0:30,0:30:78.01:0,78,709	1/1:14,0:14:36.08:397,36,0	0/0:26,0:27:74.06:0,74,657	0/0:20,0:20:38.94:0,39,345	0/0:22,0:22:42:0,42,384	0/0:10,0:10:20.99:0,21,188	1/1:23,0:23:51.01:506,51,0	1/1:21,0:20:34.89:401,35,0	0/0:29,0:29:75.02:0,75,683	0/0:25,0:25:62.99:0,63,567	0/0:36,0:36:93.02:0,93,845	0/0:2,0:2:6:0,6,55
chr10	71425383	.	GAA	G	722.80	PASS	AB=0.967;AC=9;AF=0.161;AN=56;BaseQRankSum=0.677;DP=534;FS=6.849;HRun=14;HaplotypeScore=69.5113;InbreedingCoeff=0.7266;MQ=52.33;MQ0=28;MQRankSum=0.972;QD=5.83;ReadPosRankSum=2.466;VQSLOD=-0.3437;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:25:66.43:0,66,752	0/0:4,0:10:10.50:0,10,68	1/1:27,0:2:1.63:5,2,0	0/1:28,0:8:6.25:6,0,89	0/0:20,0:22:44.02:0,44,478	0/0:10,0:12:30.38:0,30,313	0/0:23,0:24:47.04:0,47,541	0/0:31,0:28:49.99:0,50,533	0/0:14,0:14:33.11:0,33,455	1/1:9,13:19:32.96:298,33,0	1/1:6,12:17:23.92:219,24,0	0/0:16,0:16:44.63:0,45,578	0/0:11,0:15:32.24:0,32,311	0/0:14,0:14:33.09:0,33,430	0/0:16,0:16:32.60:0,33,429	0/0:15,0:13:30.05:0,30,382	1/1:9,18:25:26.11:341,26,0	0/0:7,0:13:27.41:0,27,259	0/0:29,0:25:47.91:0,48,552	0/0:20,0:20:44.70:0,45,515	0/0:14,0:14:24.08:0,24,337	0/0:6,0:6:6.02:0,6,84	0/0:3,0:12:10.57:0,11,103	0/0:2,0:11:0.20:0,0,90	0/0:4,0:18:15.66:0,16,102	0/0:32,1:34:49.81:0,50,838	0/0:24,0:24:52.64:0,53,615	0/0:6,0:5:14.80:0,15,156
chr10	71428594	.	G	GA	2088.85	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.004;DP=789;FS=1.754;HRun=3;HaplotypeScore=84.3247;InbreedingCoeff=0.9993;MQ=84.20;MQ0=0;MQRankSum=-0.735;QD=35.40;ReadPosRankSum=3.110;VQSLOD=4.2524;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,57:59:99:2184,157,0	0/0:15,0:15:45.14:0,45,540	0/0:26,0:26:75.12:0,75,853	0/0:25,0:25:66.10:0,66,747	0/0:23,0:23:63.19:0,63,755	0/0:22,0:22:63.17:0,63,736	0/0:21,0:21:60.18:0,60,719	0/0:37,0:37:99:0,105,1240	0/0:16,0:16:39.12:0,39,468	0/0:28,0:28:81.23:0,81,953	0/0:26,0:26:68.63:0,69,793	0/0:31,0:31:87.27:0,87,1043	0/0:39,0:39:99:0,117,1402	0/0:32,0:32:84.26:0,84,1007	0/0:45,0:45:99:0,120,1417	0/0:33,0:33:93.27:0,93,1102	0/0:31,0:31:84.21:0,84,970	0/0:14,0:14:39.08:0,39,451	0/0:24,0:24:72.22:0,72,864	0/0:24,0:24:69.21:0,69,827	0/0:45,0:45:99:0,123,1420	0/0:26,0:26:75.09:0,75,852	0/0:26,0:26:69.19:0,69,815	0/0:27,0:27:75.21:0,75,885	0/0:14,0:14:39.11:0,39,456	0/0:38,0:38:99:0,108,1296	0/0:32,0:32:90.27:0,90,1077	0/0:10,0:10:30.05:0,30,333
chr10	71430389	.	T	TAATA	17843	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-11.677;DP=785;FS=2.396;HRun=0;HaplotypeScore=114.4814;InbreedingCoeff=0.9997;MQ=83.90;MQ0=1;MQRankSum=-6.657;QD=68.10;ReadPosRankSum=2.399;VQSLOD=7.1679;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:78.27:2063,78,0	1/1:2,11:13:39.13:925,39,0	0/0:27,0:27:69.14:0,69,1158	0/0:22,0:22:54.19:0,54,995	0/0:27,0:27:75.23:0,75,1372	0/0:32,0:32:96.32:0,96,1791	0/0:12,0:12:36.12:0,36,667	0/0:38,0:38:99:0,99,1782	0/0:31,0:31:84.27:0,84,1563	1/1:3,34:40:99:3002,117,0	1/1:1,19:22:57.15:1391,57,0	0/0:29,0:29:84.29:0,84,1583	1/1:2,30:33:90.31:2328,90,0	0/0:25,0:25:69.22:0,69,1277	0/0:41,0:41:99:0,123,2264	0/0:36,0:36:99:0,99,1871	1/1:2,22:24:51.17:1288,51,0	1/1:3,16:17:45.15:1152,45,0	0/0:24,0:24:72.25:0,72,1367	0/0:28,0:28:81.25:0,81,1473	0/0:28,0:28:78.27:0,78,1476	0/0:37,0:37:99:0,105,1946	1/1:1,29:31:84.29:2267,84,0	1/1:2,14:16:39.13:1009,39,0	1/1:2,32:34:93.32:2419,93,0	0/0:35,0:35:99:0,99,1849	0/0:42,0:41:99:0,123,2316	0/0:9,0:9:24.08:0,24,456
chr10	71431718	.	G	GAGTTGTCCCCCAT	3874.60	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.256;DP=746;FS=4.131;HRun=0;HaplotypeScore=257.0840;InbreedingCoeff=0.9956;MQ=74.60;MQ0=0;MQRankSum=-7.908;QD=121.08;ReadPosRankSum=-0.332;VQSLOD=3.4780;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,13:32:66.23:3875,66,0	0/0:9,0:9:27.06:0,27,677	0/0:13,0:13:36.10:0,36,825	0/0:13,0:13:27.14:0,27,508	0/0:37,0:37:99:0,102,3719	0/0:30,0:30:84.27:0,84,3055	0/0:24,0:24:57.18:0,57,1993	0/0:28,0:28:66.22:0,66,2288	0/0:26,0:26:75.24:0,75,2795	0/0:31,0:31:93.31:0,93,3422	0/0:30,0:30:81.26:0,81,3038	0/0:32,0:32:93.32:0,93,3528	0/0:34,0:34:96.28:0,96,3354	0/0:23,0:23:63.17:0,63,2389	0/0:37,0:37:99:0,108,3926	0/0:31,0:31:87.30:0,87,3402	0/0:22,0:21:63.22:0,63,2451	0/0:26,0:26:72.25:0,72,2801	0/0:13,0:13:33.10:0,33,1215	0/0:25,0:25:75.26:0,75,2861	0/0:43,0:43:99:0,117,4181	0/0:26,0:26:75.26:0,75,2866	0/0:20,0:20:54.14:0,54,1942	0/0:32,0:32:84.29:0,84,3327	0/0:21,0:21:63.22:0,63,2353	0/0:37,0:37:99:0,105,3863	0/0:43,0:43:99:0,126,4829	0/0:8,0:8:24.08:0,24,951
chr10	71433198	.	A	ACAATTGGAAAG	2770.09	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.391;DP=689;FS=0.914;HRun=0;HaplotypeScore=207.5644;InbreedingCoeff=0.9979;MQ=73.28;MQ0=0;MQRankSum=-6.959;QD=115.42;ReadPosRankSum=-0.060;VQSLOD=3.7772;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:24:51.18:2865,51,0	0/0:15,0:15:45.15:0,45,1515	0/0:22,0:21:54.17:0,54,1587	0/0:23,0:21:57.12:0,57,2057	0/0:43,0:43:99:0,126,4432	0/0:22,0:22:66.19:0,66,2214	0/0:19,0:19:57.18:0,57,1983	0/0:33,0:33:96.30:0,96,3138	0/0:15,0:15:42.14:0,42,1478	0/0:31,0:31:93.31:0,93,3383	0/0:21,0:21:63.22:0,63,2240	0/0:27,0:27:78.23:0,78,2656	0/0:21,0:21:63.22:0,63,2285	0/0:20,0:20:60.21:0,60,2207	0/0:28,0:27:84.29:0,84,3049	0/0:29,0:29:84.27:0,84,2933	0/0:24,0:24:72.19:0,72,2219	0/0:16,0:16:48.16:0,48,1650	0/0:22,0:22:66.23:0,66,2341	0/0:32,0:32:96.32:0,96,3349	0/0:28,0:28:81.23:0,81,2922	0/0:30,0:30:90.30:0,90,3130	0/0:24,0:24:66.21:0,66,2232	0/0:28,0:28:84.28:0,84,2946	0/0:17,0:17:51.17:0,51,1710	0/0:26,0:26:78.27:0,78,2886	0/0:41,0:41:99:0,117,4008	0/0:8,0:8:24.08:0,24,895
chr10	71434410	.	TA	T	3468.02	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=9.165;DP=580;FS=9.431;HRun=12;HaplotypeScore=56.6773;InbreedingCoeff=0.9003;MQ=56.69;MQ0=3;MQRankSum=1.538;QD=15.41;ReadPosRankSum=4.573;VQSLOD=4.0030;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:31:71.72:557,72,0	1/1:1,2:3:2.98:23,3,0	0/0:11,0:8:21.92:0,22,208	0/0:10,0:2:3.01:0,3,30	0/0:42,2:44:73.99:0,74,1019	0/0:20,0:21:58.77:0,59,567	0/0:15,0:15:42.08:0,42,426	0/0:25,0:23:46.62:0,47,449	0/0:22,0:23:59.95:0,60,591	1/1:4,22:25:35.85:417,36,0	1/1:8,14:22:11.38:271,11,0	0/0:12,0:12:29.98:0,30,290	1/1:1,24:26:49.85:377,50,0	0/0:22,0:22:57.10:0,57,573	0/0:18,1:20:33.69:0,34,498	0/0:18,1:19:21.82:0,22,385	1/1:6,18:23:38.85:302,39,0	1/1:0,18:18:32.87:255,33,0	0/0:17,0:18:44.92:0,45,435	0/0:25,3:28:34.05:0,34,575	0/0:11,0:11:24.03:0,24,237	0/0:10,0:11:29.82:0,30,269	1/1:5,22:28:58.79:447,59,0	1/1:2,19:22:43.86:331,44,0	1/1:2,23:25:62.74:488,63,0	0/0:18,2:21:10.43:0,10,436	0/0:33,1:34:36.81:0,37,537	0/0:8,1:8:0.77:0,1,180
chr10	71434600	.	AAACC	A	874.56	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.573;DP=696;FS=0.847;HRun=0;HaplotypeScore=131.5403;InbreedingCoeff=0.9575;MQ=67.14;MQ0=4;MQRankSum=1.326;QD=20.82;ReadPosRankSum=0.217;VQSLOD=3.2628;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,29:42:60.20:969,60,0	0/0:9,0:9:27.08:0,27,487	0/0:36,0:26:20.93:0,21,405	0/0:41,0:30:35.89:0,36,700	0/0:24,0:24:59.35:0,59,1256	0/0:27,0:27:63.15:0,63,1296	0/0:20,0:20:33.10:0,33,734	0/0:35,0:35:51.16:0,51,1129	0/0:25,0:25:60.11:0,60,1183	0/0:22,0:22:60.19:0,60,1029	0/0:19,0:19:51.17:0,51,958	0/0:30,0:30:66.23:0,66,1572	0/0:32,0:32:81.28:0,81,1502	0/0:33,0:33:72.23:0,72,1666	0/0:28,0:28:72.22:0,72,1682	0/0:28,0:28:81.19:0,81,1895	0/0:29,0:28:63.21:0,63,1151	0/0:24,0:24:57.17:0,57,1027	0/0:21,0:19:36.11:0,36,810	0/0:20,0:20:42.13:0,42,973	0/0:24,0:24:60.21:0,60,1438	0/0:8,0:8:18.06:0,18,437	0/0:17,0:17:39.13:0,39,751	0/0:18,0:18:45.15:0,45,833	0/0:19,0:19:48.16:0,48,903	0/0:26,0:26:69.20:0,69,1514	0/0:34,0:34:87.20:0,87,2062	0/0:5,0:5:12.04:0,12,293
chr10	71434967	.	C	CA	1090.37	PASS	AB=0.834;AC=22;AF=0.393;AN=56;BaseQRankSum=-1.123;DP=571;FS=6.845;HRun=15;HaplotypeScore=79.7290;InbreedingCoeff=0.2553;MQ=79.15;MQ0=2;MQRankSum=0.964;QD=3.45;ReadPosRankSum=-1.352;VQSLOD=0.2989;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,9:16:9.38:64,9,0	1/1:3,0:3:2.98:21,3,0	0/1:43,0:19:18.96:19,0,43	0/0:26,0:20:5.42:0,5,74	0/0:24,0:24:10.10:0,10,119	0/0:23,0:25:4.76:0,5,137	0/0:14,1:19:8.62:0,9,140	0/1:23,2:26:1.47:1,0,204	0/0:16,0:16:8.27:0,8,53	0/1:14,7:21:12.24:91,0,12	0/1:8,8:17:8.32:127,0,8	0/1:16,1:18:6.03:6,0,69	0/1:7,8:16:1.74:71,0,2	0/0:17,1:21:19.15:0,19,112	0/0:16,0:17:22.32:0,22,129	0/0:12,0:12:22.52:0,23,130	0/1:12,14:27:43.03:191,0,43	1/1:5,18:24:20.76:268,21,0	0/0:28,0:30:27.83:0,28,166	0/1:20,5:25:24.32:24,0,99	0/1:14,1:17:3.78:4,0,102	0/0:12,0:12:11.43:0,11,71	1/1:6,10:17:14.82:115,15,0	1/1:4,14:19:17.12:165,17,0	1/1:8,6:15:11.95:94,12,0	0/0:27,0:28:2.94:0,3,101	0/0:23,0:24:11.27:0,11,108	0/1:11,0:12:1.61:2,0,91
chr10	71435991	.	T	TACGTAAAAGC	2415.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.625;DP=609;FS=18.228;HRun=0;HaplotypeScore=216.5221;InbreedingCoeff=0.8693;MQ=70.59;MQ0=0;MQRankSum=-7.250;QD=63.57;ReadPosRankSum=-2.304;VQSLOD=1.8673;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,15:38:57.20:2511,57,0	0/0:7,0:7:18.06:0,18,523	0/0:8,0:8:5.99:0,6,115	0/0:9,0:9:12.04:0,12,312	0/0:27,0:27:57.20:0,57,1689	0/0:14,0:14:36.12:0,36,1087	0/0:24,0:24:63.22:0,63,1855	0/0:33,0:32:63.19:0,63,1693	0/0:29,0:29:63.22:0,63,1911	0/0:26,0:26:72.25:0,72,2148	0/0:16,0:16:45.14:0,45,1266	0/0:22,0:22:54.19:0,54,1671	0/0:32,0:32:93.32:0,93,2828	0/0:24,0:24:51.16:0,51,1469	0/0:20,0:20:42.14:0,42,1304	0/0:16,0:15:36.12:0,36,1093	0/0:39,0:39:93.32:0,93,2672	0/0:27,0:27:60.16:0,60,1618	0/0:15,0:15:27.09:0,27,838	0/0:17,0:17:48.15:0,48,1422	0/0:35,0:35:90.29:0,90,2673	0/0:26,0:26:60.21:0,60,1840	0/0:9,0:9:21.07:0,21,595	0/0:34,0:34:78.27:0,78,2190	0/0:16,0:16:33.11:0,33,990	0/0:17,0:17:42.14:0,42,1218	0/0:18,0:18:39.13:0,39,1210	0/0:11,0:11:33.11:0,33,1024
chr10	71438377	.	C	CTT	1749.76	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.299;DP=547;FS=2.360;HRun=5;HaplotypeScore=93.6096;InbreedingCoeff=0.9656;MQ=66.46;MQ0=1;MQRankSum=-7.482;QD=14.23;ReadPosRankSum=-2.969;VQSLOD=-0.4998;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:21,10:32:33.10:578,33,0	1/1:8,2:10:8.99:115,9,0	0/0:17,0:15:21.67:0,22,312	0/0:11,0:9:13.57:0,14,186	0/0:22,0:22:54.16:0,54,674	0/0:19,0:19:57.18:0,57,723	0/0:16,0:16:42.10:0,42,506	0/0:29,0:29:84.22:0,84,1036	0/0:14,0:14:39.12:0,39,496	1/1:17,3:23:31.87:372,32,0	1/1:11,4:15:7.61:173,8,0	0/0:12,0:12:33.10:0,33,420	0/0:22,0:22:63.20:0,63,799	0/0:23,0:23:66.20:0,66,826	0/0:18,0:18:54.17:0,54,687	0/0:21,0:21:60.19:0,60,763	1/1:16,9:26:43.63:477,44,0	0/0:20,0:20:54.13:0,54,668	0/0:25,0:25:60.06:0,60,709	0/0:16,0:16:45.11:0,45,543	0/0:24,0:24:63.17:0,63,777	0/0:19,0:19:57.17:0,57,711	0/0:20,0:20:51.16:0,51,648	0/0:18,0:18:40.80:0,41,566	1/1:11,3:14:20.85:216,21,0	0/0:22,0:21:60.14:0,60,735	0/0:24,0:24:62.69:0,63,777	0/0:11,0:11:30.09:0,30,378
chr10	71438701	.	T	TG	3464.35	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-9.095;DP=541;FS=3.184;HRun=5;HaplotypeScore=48.8073;InbreedingCoeff=0.9956;MQ=77.18;MQ0=0;MQRankSum=-1.235;QD=32.38;ReadPosRankSum=0.708;VQSLOD=4.1264;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:22:54.18:711,54,0	1/1:0,5:5:15.05:197,15,0	0/0:11,0:11:29.98:0,30,291	0/0:20,0:19:27.45:0,27,415	0/0:43,0:43:99:0,123,1314	0/0:16,0:16:42.11:0,42,451	0/0:13,0:13:39.08:0,39,410	0/0:30,0:30:78.19:0,78,832	0/0:11,0:11:33.06:0,33,345	1/1:2,17:19:51.15:656,51,0	1/1:2,14:16:36.12:472,36,0	0/0:20,0:20:54.13:0,54,578	0/0:27,0:27:75.17:0,75,796	0/0:14,0:14:39.10:0,39,419	0/0:22,0:22:60.14:0,60,637	0/0:20,0:20:60.15:0,60,645	1/1:5,20:25:30.96:757,31,0	0/0:13,0:13:39.10:0,39,419	0/0:13,0:13:33.08:0,33,354	0/0:29,0:29:84.17:0,84,879	0/0:11,0:11:24.06:0,24,258	0/0:13,0:13:39.10:0,39,419	0/0:29,0:29:84.19:0,84,894	0/0:10,0:10:30.08:0,30,322	1/1:0,20:20:51.17:671,51,0	0/0:26,0:26:75.18:0,75,800	0/0:32,0:32:93.23:0,93,999	0/0:11,0:11:33.08:0,33,355
chr10	71440433	.	A	AT	3155	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-11.534;DP=750;FS=4.559;HRun=5;HaplotypeScore=66.9519;InbreedingCoeff=0.9988;MQ=83.85;MQ0=0;MQRankSum=-5.726;QD=34.29;ReadPosRankSum=2.768;VQSLOD=4.2123;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,1290	0/0:7,0:7:21.05:0,21,226	0/0:25,0:25:69.15:0,69,723	0/0:18,0:18:42.10:0,42,449	0/0:35,0:35:99:0,99,1062	0/0:21,0:21:54.13:0,54,580	0/0:27,0:27:78.18:0,78,828	0/0:36,0:36:84.20:0,84,902	0/0:29,0:29:78.17:0,78,830	0/0:32,0:32:90.23:0,90,967	0/0:25,0:25:72.18:0,72,774	0/0:26,0:26:72.18:0,72,773	1/1:1,23:24:69.22:907,69,0	0/0:29,0:29:84.21:0,84,902	0/0:35,0:35:99:0,99,1055	0/0:33,0:33:93.22:0,93,991	0/0:23,0:23:66.14:0,66,699	1/1:1,23:24:66.21:868,66,0	0/0:23,0:23:60.15:0,60,645	0/0:28,0:28:75.19:0,75,806	0/0:27,0:27:72.18:0,72,774	0/0:29,0:29:87.20:0,87,926	1/1:1,19:20:57.19:750,57,0	1/1:2,22:24:60.20:790,60,0	0/0:28,0:28:78.19:0,78,838	0/0:35,0:35:96.24:0,96,1032	0/0:32,0:32:93.18:0,93,978	0/0:12,0:12:36.09:0,36,387
chr10	71441134	.	TC	T	2437.34	PASS	AB=0.680;AC=8;AF=0.143;AN=56;BaseQRankSum=12.393;DP=712;FS=0.000;HRun=1;HaplotypeScore=78.2820;InbreedingCoeff=0.4104;MQ=81.82;MQ0=0;MQRankSum=-11.959;QD=15.62;ReadPosRankSum=0.501;VQSLOD=3.4095;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,17:34:78.04:550,0,78	1/1:6,5:11:15.05:209,15,0	0/0:30,0:30:90.24:0,90,1389	0/0:22,0:22:62.24:0,62,941	0/0:34,0:34:99:0,102,1630	0/0:36,0:36:99:0,108,1726	0/0:21,0:21:63.21:0,63,1007	0/0:32,0:32:93.32:0,93,1485	0/0:22,0:22:66.22:0,66,1047	0/1:14,16:30:99:580,0,479	1/1:16,18:34:44.98:538,45,0	0/0:21,0:21:63.21:0,63,1007	0/0:27,0:27:81.28:0,81,1295	0/0:34,0:34:99:0,102,1625	0/0:24,0:23:72.23:0,72,1128	0/0:17,0:17:51.17:0,51,815	0/1:8,6:14:48.78:187,0,49	0/0:19,0:19:57.19:0,57,911	0/0:20,0:20:60.20:0,60,938	0/0:28,0:28:84.29:0,84,1343	0/0:29,0:29:87.28:0,87,1367	0/0:17,0:17:51.17:0,51,815	0/0:23,0:23:69.24:0,69,1103	0/0:28,0:28:81.23:0,81,1263	0/1:19,14:33:99:520,0,103	0/0:21,0:21:43.33:0,43,932	0/0:39,0:39:99:0,117,1870	0/0:12,0:12:36.12:0,36,575
chr10	71442485	.	A	ATT	9423.19	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-11.886;DP=629;FS=2.799;HRun=3;HaplotypeScore=69.5681;InbreedingCoeff=0.9982;MQ=80.93;MQ0=0;MQRankSum=-0.631;QD=46.65;ReadPosRankSum=4.173;VQSLOD=4.2266;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:78.27:1430,78,0	1/1:0,11:11:33.11:605,33,0	0/0:18,0:18:48.16:0,48,661	0/0:19,0:18:45.12:0,45,589	0/0:29,0:29:84.27:0,84,1156	0/0:24,0:24:69.23:0,69,962	0/0:22,0:22:63.19:0,63,858	0/0:40,0:40:99:0,111,1492	0/0:22,0:22:57.19:0,57,796	1/1:0,22:22:63.19:1088,63,0	1/1:1,14:15:42.06:700,42,0	0/0:23,0:23:66.22:0,66,922	1/1:3,22:25:66.23:1200,66,0	0/0:24,0:24:72.24:0,72,1007	0/0:24,0:24:66.22:0,66,923	0/0:12,0:12:36.12:0,36,504	1/1:0,22:22:51.17:935,51,0	1/1:1,21:22:54.19:990,54,0	0/0:19,0:19:48.16:0,48,667	0/0:32,0:32:87.28:0,87,1199	0/0:23,0:23:69.20:0,69,929	0/0:21,0:21:57.19:0,57,792	1/1:1,16:17:39.13:715,39,0	1/1:0,17:18:48.16:880,48,0	1/1:1,18:19:48.16:880,48,0	0/0:28,1:29:23.23:0,23,993	0/0:39,0:39:99:0,114,1577	0/0:7,0:7:17.62:0,18,198
chr10	71443622	.	T	TAA	2682.92	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-1.937;DP=605;FS=0.000;HRun=2;HaplotypeScore=71.9028;InbreedingCoeff=0.9986;MQ=90.10;MQ0=0;MQRankSum=-2.722;QD=46.26;ReadPosRankSum=1.489;VQSLOD=3.4113;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.29:0,87,1279	0/0:11,0:11:33.11:0,33,486	0/0:21,0:22:62.91:0,63,848	0/0:26,0:26:66.14:0,66,909	0/0:18,0:18:54.18:0,54,795	0/0:25,0:25:72.24:0,72,1057	0/0:18,0:18:51.17:0,51,751	0/0:37,0:37:99:0,99,1441	0/0:16,0:16:48.15:0,48,688	0/0:17,0:17:45.15:0,45,663	0/0:24,0:24:72.23:0,72,1041	0/0:18,0:18:51.14:0,51,712	1/1:2,12:14:42.14:776,42,0	0/0:23,0:23:69.21:0,69,978	0/0:26,0:26:75.25:0,75,1103	0/0:26,0:26:78.26:0,78,1149	0/0:27,0:26:78.26:0,78,1149	1/1:1,6:7:21.07:392,21,0	0/0:26,0:26:69.23:0,69,1014	0/0:19,0:19:54.17:0,54,775	0/0:22,0:22:63.20:0,63,909	0/0:13,0:13:36.12:0,36,530	1/1:0,24:24:63.22:1179,63,0	1/1:2,11:12:30.05:495,30,0	0/0:22,0:22:63.21:0,63,928	0/0:24,0:24:69.23:0,69,1016	0/0:29,0:28:87.25:0,87,1217	0/0:26,0:26:78.26:0,78,1149
chr10	71443655	.	C	CT	1470.70	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-0.087;DP=546;FS=5.642;HRun=6;HaplotypeScore=57.4520;InbreedingCoeff=0.9935;MQ=78.73;MQ0=0;MQRankSum=-4.156;QD=24.93;ReadPosRankSum=-1.562;VQSLOD=2.9462;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.18:0,84,857	0/0:7,0:7:18.04:0,18,184	0/0:10,1:11:23.94:0,24,226	0/0:16,0:16:18:0,18,236	0/0:14,0:14:33.04:0,33,326	0/0:23,0:23:66.15:0,66,673	0/0:20,0:20:57.08:0,57,561	0/0:43,0:43:99:0,105,1071	0/0:13,0:13:33.07:0,33,337	0/0:19,0:19:54.12:0,54,551	0/0:19,0:19:48.11:0,48,490	0/0:10,0:10:27.06:0,27,275	1/1:1,13:14:36.12:453,36,0	0/0:23,0:23:63.14:0,63,643	0/0:26,0:26:72.16:0,72,735	0/0:24,0:24:63.13:0,63,636	0/0:32,0:31:81.17:0,81,826	1/1:2,12:13:36.12:453,36,0	0/0:27,0:27:63.13:0,63,643	0/0:17,0:17:51.11:0,51,520	0/0:24,0:24:63.12:0,63,635	0/0:10,0:10:24.05:0,24,245	1/1:6,8:14:27.08:328,27,0	1/1:3,14:17:33.06:397,33,0	0/0:20,0:20:54.12:0,54,551	0/0:18,0:18:51.11:0,51,516	0/0:20,0:19:54.12:0,54,550	0/0:19,0:19:54.12:0,54,551
chr10	71444236	.	CTT	C	1314.11	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.978;DP=692;FS=10.358;HRun=2;HaplotypeScore=78.9037;InbreedingCoeff=0.9957;MQ=82.04;MQ0=0;MQRankSum=-2.730;QD=41.07;ReadPosRankSum=2.348;VQSLOD=2.7221;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:87.30:1409,87,0	0/0:11,0:11:33.11:0,33,665	0/0:19,0:19:57.11:0,57,995	0/0:19,0:19:50.34:0,50,996	0/0:28,0:28:84.26:0,84,1633	0/0:24,0:24:72.22:0,72,1382	0/0:28,0:28:84.21:0,84,1629	0/0:22,0:22:66.20:0,66,1204	0/0:31,0:31:93.25:0,93,1743	0/0:29,0:29:87.29:0,87,1734	0/0:31,0:31:93.31:0,93,1842	0/0:23,0:23:69.24:0,69,1395	0/0:31,0:31:93.27:0,93,1804	0/0:28,0:28:84.26:0,84,1597	0/0:22,0:22:66.23:0,66,1341	0/0:35,0:35:99:0,105,2013	0/0:24,0:24:72.25:0,72,1439	0/0:19,0:19:57.20:0,57,1156	0/0:29,0:29:84.27:0,84,1601	0/0:33,0:33:99:0,99,1968	0/0:21,0:21:63.19:0,63,1209	0/0:22,0:22:66.20:0,66,1232	0/0:21,0:21:63.20:0,63,1239	0/0:22,0:22:66.23:0,66,1338	0/0:23,0:23:69.20:0,69,1231	0/0:37,0:37:99:0,108,2058	0/0:21,0:21:63.22:0,63,1265	0/0:7,0:7:21.07:0,21,426
chr10	71444863	.	TGA	T	74.66	PASS	AB=0.787;AC=3;AF=0.054;AN=56;BaseQRankSum=6.434;DP=1115;FS=4.241;HRun=0;HaplotypeScore=184.2761;InbreedingCoeff=-0.0526;MQ=53.60;MQ0=26;MQRankSum=-3.197;QD=0.75;ReadPosRankSum=-2.047;VQSLOD=2.2185;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,2:46:56.73:0,57,933	0/0:16,0:16:45.15:0,45,857	0/0:43,0:9:18.45:0,18,340	0/0:55,1:13:23.94:0,24,337	0/0:39,0:39:99:0,105,1845	0/0:27,0:27:78.23:0,78,1370	0/0:37,0:36:99:0,99,1814	0/0:55,0:52:99:0,150,2474	0/0:38,0:38:99:0,105,1795	0/0:40,0:39:99:0,103,1971	0/0:26,0:26:60.19:0,60,1070	0/0:47,0:45:99:0,123,2184	0/1:45,11:56:63.99:64,0,1206	0/0:47,0:47:99:0,137,2324	0/0:51,0:50:99:0,124,2471	0/0:43,0:43:99:0,122,2054	0/0:33,0:32:57.89:0,58,1062	0/1:11,4:15:98.59:99,0,503	0/0:31,0:22:61.88:0,62,922	0/0:32,0:32:93.27:0,93,1661	0/0:104,0:103:99:0,246,4696	0/0:40,0:40:99:0,114,1945	0/1:18,10:27:5.14:5,0,294	0/0:51,9:60:18.27:0,18,670	0/0:30,0:30:66.21:0,66,1217	0/0:40,0:38:99:0,114,2005	0/0:21,0:21:63.20:0,63,1153	0/0:13,0:13:39.13:0,39,725
chr10	71444885	.	A	AGTGT	5399.49	PASS	AB=0.603;AC=16;AF=0.286;AN=56;BaseQRankSum=0.563;DP=1153;FS=6.890;HRun=0;HaplotypeScore=206.5071;InbreedingCoeff=0.7918;MQ=54.46;MQ0=22;MQRankSum=-1.742;QD=15.47;ReadPosRankSum=2.763;VQSLOD=3.6122;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:47:66.07:0,66,1027	1/1:6,13:19:24.08:593,24,0	0/0:42,0:10:4.99:0,5,90	0/0:63,0:15:11.38:0,11,171	0/0:36,0:37:69.17:0,69,1044	0/0:34,0:34:77.62:0,78,1081	0/0:34,0:34:51.31:0,51,976	0/0:46,0:44:61.05:0,61,920	0/0:40,0:41:87.50:0,88,1288	1/1:10,29:44:96.80:1672,97,0	1/1:2,24:27:38.03:962,38,0	0/0:47,0:46:99:0,117,1736	0/1:17,0:67:76.15:188,0,76	0/0:47,0:48:99:0,107,1500	0/0:50,0:51:99:0,123,1902	0/0:45,0:45:87.46:0,87,1460	1/1:8,29:39:39.08:781,39,0	1/1:14,0:20:12.26:95,12,0	0/0:20,0:18:30.09:0,30,463	0/0:34,0:35:90.27:0,90,1410	0/0:94,0:95:99:0,145,2579	0/0:42,0:43:99:0,105,1638	1/1:17,0:32:16.38:73,16,0	0/1:21,0:71:96.52:146,0,97	1/1:8,20:29:36.12:890,36,0	0/0:34,0:33:77.14:0,77,1170	0/0:26,0:26:69.22:0,69,1099	0/0:10,0:10:21.07:0,21,351
chr10	71448310	.	G	GT	405.64	PASS	AB=0.947;AC=9;AF=0.161;AN=56;BaseQRankSum=6.358;DP=592;FS=8.092;HRun=6;HaplotypeScore=88.6402;InbreedingCoeff=0.6601;MQ=58.74;MQ0=17;MQRankSum=-4.894;QD=5.27;ReadPosRankSum=-2.243;VQSLOD=-0.4880;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,8:13:21.73:281,22,0	0/0:9,0:9:27.03:0,27,266	0/0:26,0:12:15.37:0,15,172	0/0:26,0:9:8.06:0,8,122	0/0:38,0:38:99:0,105,1063	0/0:28,0:26:78.16:0,78,789	0/0:18,0:18:48.11:0,48,489	0/0:24,0:23:63.05:0,63,641	0/0:17,0:17:51.11:0,51,519	0/0:31,0:30:72.13:0,72,734	0/0:23,0:22:66.15:0,66,672	0/0:19,0:19:51.08:0,51,510	1/1:21,1:22:0.05:101,0,0	0/0:25,0:25:72.16:0,72,734	0/0:23,0:23:63.14:0,63,643	0/0:14,0:14:39.09:0,39,397	0/0:28,0:27:66.14:0,66,673	1/1:13,0:12:0.41:89,0,0	0/0:23,0:19:48.09:0,48,481	0/0:24,0:24:66.12:0,66,664	0/0:21,0:21:63.14:0,63,642	0/0:11,0:11:27.05:0,27,275	0/1:17,1:18:4.72:32,0,5	1/1:8,2:10:1.12:33,1,0	0/0:15,0:15:42.07:0,42,420	0/0:30,0:30:72.16:0,72,735	0/0:28,0:28:84.16:0,84,847	0/0:13,0:13:29.41:0,29,304
chr10	71448314	.	TTTG	T	2091.24	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=10.542;DP=621;FS=9.359;HRun=0;HaplotypeScore=108.6753;InbreedingCoeff=0.8300;MQ=58.52;MQ0=19;MQRankSum=-9.292;QD=27.88;ReadPosRankSum=1.098;VQSLOD=3.3831;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:7.72:8,0,245	0/0:10,0:10:30.05:0,30,563	0/0:30,0:12:19.86:0,20,303	0/0:33,0:11:1.56:0,2,214	0/0:39,0:39:99:0,117,2319	0/0:29,0:27:81.26:0,81,1722	0/0:18,0:18:51.15:0,51,1043	0/0:30,0:29:81.10:0,81,1513	0/0:17,0:17:51.17:0,51,1034	0/0:34,0:33:87.21:0,87,1652	0/0:25,0:24:72.23:0,72,1435	0/0:19,0:19:54.18:0,54,1104	1/1:7,13:20:57.15:876,57,0	0/0:24,0:24:72.24:0,72,1503	0/0:21,0:21:63.22:0,63,1378	0/0:14,0:14:42.14:0,42,901	0/0:26,0:26:78.19:0,78,1520	1/1:5,9:13:36.96:529,37,0	0/0:27,0:22:57.15:0,57,1063	0/0:24,0:24:72.23:0,72,1520	0/0:22,0:22:66.21:0,66,1398	0/0:11,0:11:27.09:0,27,562	1/1:7,10:17:39.09:595,39,0	1/1:3,6:9:15.01:245,15,0	0/0:17,0:17:51.12:0,51,969	0/0:30,0:29:75.24:0,75,1596	0/0:32,0:32:96.29:0,96,1844	0/0:13,0:13:27.38:0,27,488
chr10	71448348	.	TG	T	1462.64	PASS	AB=0.636;AC=9;AF=0.161;AN=56;BaseQRankSum=12.387;DP=628;FS=14.290;HRun=1;HaplotypeScore=94.3811;InbreedingCoeff=0.8798;MQ=57.97;MQ0=6;MQRankSum=-10.743;QD=20.04;ReadPosRankSum=-1.039;VQSLOD=2.4669;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:10:9.49:54,9,0	0/0:10,0:10:30.08:0,30,395	0/0:19,0:9:12.28:0,12,168	0/0:21,1:13:19.15:0,19,292	0/0:41,0:41:99:0,123,1617	0/0:26,0:26:78.22:0,78,1031	0/0:13,0:13:39.13:0,39,530	0/0:32,0:32:93.10:0,93,1131	0/0:22,0:22:63.15:0,63,822	0/0:33,0:33:98.72:0,99,1248	0/0:21,0:21:63.17:0,63,804	0/0:22,0:22:66.17:0,66,854	1/1:9,12:21:53.24:545,53,0	0/0:21,0:21:63.15:0,63,816	0/0:34,0:34:99:0,102,1273	0/0:20,0:20:60.15:0,60,773	0/0:27,0:26:78.10:0,78,992	1/1:6,7:13:12.72:282,13,0	0/0:27,0:24:53.92:0,54,825	0/0:35,0:35:99:0,102,1313	0/0:23,0:23:69.19:0,69,901	0/0:12,0:12:36.10:0,36,478	1/1:2,19:20:59.99:676,60,0	0/1:3,4:7:2.77:66,0,3	0/0:26,0:25:75.10:0,75,939	0/0:25,0:24:69.19:0,69,914	0/0:37,0:36:99:0,108,1396	0/0:4,0:4:12.04:0,12,160
chr10	71448368	.	TG	T	642.82	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=10.469;DP=593;FS=8.241;HRun=1;HaplotypeScore=85.7414;InbreedingCoeff=0.5199;MQ=60.98;MQ0=0;MQRankSum=-8.606;QD=9.45;ReadPosRankSum=-0.126;VQSLOD=0.6425;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:8:7.22:31,0,7	0/0:10,0:10:30.08:0,30,393	0/0:15,0:13:39.09:0,39,464	0/0:13,0:11:22.80:0,23,300	0/0:44,0:44:99:0,132,1714	0/0:26,0:26:75.20:0,75,985	0/0:13,0:13:39.07:0,39,471	0/0:27,0:27:78.50:0,79,978	0/0:26,0:26:78.24:0,78,1009	0/0:31,0:31:93.12:0,93,1194	0/0:21,0:21:63.14:0,63,835	0/0:23,0:23:69.16:0,69,885	1/1:10,5:18:1.37:299,1,0	0/0:21,0:21:63.17:0,63,818	0/0:31,0:31:93.28:0,93,1236	0/0:21,0:21:63.17:0,63,819	0/0:23,0:24:69.12:0,69,875	0/1:13,0:14:21.69:52,0,22	0/0:24,0:22:65.78:0,66,792	0/0:31,0:31:93.28:0,93,1256	0/0:19,0:19:54.08:0,54,656	0/0:16,0:16:48.13:0,48,610	1/1:15,3:18:46.81:380,47,0	0/1:8,0:8:3.80:11,0,4	0/0:23,0:23:69.16:0,69,904	0/0:24,0:24:72.16:0,72,892	0/0:34,0:33:99:0,99,1315	0/0:8,0:8:24.08:0,24,298
chr10	71448369	.	G	GGGT	2712.55	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.128;DP=593;FS=6.883;HRun=0;HaplotypeScore=101.7427;InbreedingCoeff=0.9653;MQ=61.24;MQ0=0;MQRankSum=-8.246;QD=49.32;ReadPosRankSum=-0.789;VQSLOD=5.3738;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:8:17.23:0,17,129	0/0:10,0:10:30.10:0,30,547	0/0:14,0:13:39.12:0,39,649	0/0:12,0:11:27.08:0,27,442	0/0:44,0:44:99:0,132,2362	0/0:26,0:26:75.25:0,75,1363	0/0:14,0:14:39.13:0,39,699	0/0:27,0:27:78.19:0,78,1364	0/0:26,0:26:78.27:0,78,1438	0/0:32,0:32:93.30:0,93,1654	0/0:21,0:21:63.21:0,63,1133	0/0:23,0:23:69.24:0,69,1229	1/1:9,9:18:54.16:1135,54,0	0/0:22,0:22:63.21:0,63,1148	0/0:30,0:30:90.31:0,90,1654	0/0:21,0:21:63.22:0,63,1158	0/0:24,0:24:69.20:0,69,1233	1/1:1,11:13:21.07:483,21,0	0/0:25,0:23:66.22:0,66,1180	0/0:31,0:31:93.32:0,93,1715	0/0:20,0:20:54.16:0,54,924	0/0:17,0:17:48.16:0,48,869	1/1:4,13:16:48.16:1126,48,0	1/1:1,6:7:6.02:122,6,0	0/0:23,0:23:69.22:0,69,1215	0/0:25,0:25:72.23:0,72,1274	0/0:34,0:33:99:0,99,1817	0/0:8,0:8:24.08:0,24,447
chr10	71448797	.	TA	T	913.19	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.259;DP=625;FS=17.598;HRun=4;HaplotypeScore=66.1176;InbreedingCoeff=0.9777;MQ=77.89;MQ0=0;MQRankSum=-10.224;QD=18.26;ReadPosRankSum=1.045;VQSLOD=2.2007;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.20:0,69,930	1/1:0,4:4:11.87:79,12,0	0/0:12,0:12:26.85:0,27,370	0/0:22,0:22:66.17:0,66,860	0/0:41,0:41:99:0,120,1661	0/0:28,0:28:81.23:0,81,1097	0/0:22,0:22:66.18:0,66,873	0/0:47,0:47:99:0,129,1776	0/0:14,0:14:42.14:0,42,588	1/1:0,18:16:45.10:522,45,0	1/1:0,12:12:29.65:197,30,0	0/0:28,0:28:78.24:0,78,1060	0/0:30,0:30:90.27:0,90,1210	0/0:21,0:22:63.18:0,63,861	0/0:23,0:23:69.22:0,69,951	0/0:24,0:24:69.22:0,69,949	1/1:0,5:5:8.90:60,9,0	0/0:21,0:21:57.16:0,57,762	0/0:26,0:26:78.22:0,78,1040	0/0:37,0:37:99:0,102,1395	0/0:18,0:18:54.15:0,54,722	0/0:27,0:27:81.23:0,81,1083	0/0:23,0:23:66.22:0,66,924	0/0:10,0:10:27.09:0,27,378	1/1:0,11:11:32.55:224,33,0	0/0:32,0:32:93.30:0,93,1288	0/0:31,0:31:87.29:0,87,1218	0/0:13,0:13:39.13:0,39,546
chr10	71449876	.	ATATATATAGAGAGAGAGAGAGAG	A	1299.49	PASS	AB=0.843;AC=8;AF=0.167;AN=48;BaseQRankSum=4.886;DP=128;FS=4.199;HRun=0;HaplotypeScore=91.1621;InbreedingCoeff=0.2362;MQ=54.28;MQ0=8;MQRankSum=-4.156;QD=35.12;ReadPosRankSum=-0.033;VQSLOD=1.8532;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:6,2:7:2.91:48,0,3	0/1:6,0:6:7.08:7,0,808	./.	0/1:3,0:2:5.30:5,0,74	0/0:4,0:4:9.03:0,9,651	0/0:3,0:3:6.02:0,6,470	0/0:2,0:2:6.02:0,6,441	0/0:15,0:13:36.59:0,37,1382	0/0:2,0:2:6.02:0,6,431	0/0:2,0:2:6.02:0,6,299	0/0:3,0:3:6.02:0,6,349	0/0:3,0:3:9.03:0,9,472	1/1:4,3:8:13.24:545,13,0	./.	./.	0/0:5,0:5:15.05:0,15,1108	0/0:18,0:16:38.72:0,39,2474	0/1:2,3:8:99:684,0,174	0/0:4,0:2:6.02:0,6,213	0/0:4,0:4:3.01:0,3,280	0/0:2,0:2:6.02:0,6,319	0/0:1,0:1:3.01:0,3,117	1/1:3,1:4:8.94:136,9,0	./.	0/0:8,0:8:5.91:0,6,456	0/0:2,0:2:3.01:0,3,173	0/0:6,0:6:18.06:0,18,848	0/0:5,0:4:12.04:0,12,804
chr10	71449886	.	AGAGAGAGAGAGAG	A	696.87	PASS	AB=0.944;AC=6;AF=0.111;AN=54;BaseQRankSum=4.340;DP=190;FS=1.221;HRun=0;HaplotypeScore=83.7465;InbreedingCoeff=0.3594;MQ=68.28;MQ0=8;MQRankSum=-4.789;QD=25.81;ReadPosRankSum=0.630;VQSLOD=2.3150;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,2:7:11.70:73,12,0	0/0:5,0:5:15.05:0,15,674	0/0:9,0:4:8.49:0,8,232	0/0:14,0:7:6.72:0,7,322	0/0:4,0:4:9.03:0,9,571	0/0:5,0:5:9.03:0,9,527	0/0:5,0:5:12.04:0,12,775	0/0:18,0:17:48.16:0,48,1575	0/0:5,0:5:15.05:0,15,801	0/0:7,0:7:20.10:0,20,860	0/0:4,0:4:9.03:0,9,314	0/0:3,0:3:9.03:0,9,486	0/1:7,1:8:17.41:318,0,17	0/0:3,0:3:9.03:0,9,454	0/0:2,0:2:3.01:0,3,143	0/0:7,0:7:18.06:0,18,1017	0/0:21,0:19:39.09:0,39,1649	0/1:7,0:7:99:296,0,166	0/0:7,0:5:15.05:0,15,841	0/0:5,0:5:3.01:0,3,199	0/0:2,0:2:6.02:0,6,235	0/0:3,0:3:6.02:0,6,189	1/1:1,3:4:8.94:134,9,0	./.	0/0:11,0:11:11.93:0,12,680	0/0:5,0:5:12.04:0,12,630	0/0:11,0:11:33.11:0,33,1446	0/0:7,0:5:15.05:0,15,904
chr10	71452365	.	G	GT	3115.42	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-10.156;DP=663;FS=7.793;HRun=6;HaplotypeScore=69.8224;InbreedingCoeff=0.8867;MQ=75.17;MQ0=2;MQRankSum=-1.453;QD=22.58;ReadPosRankSum=2.210;VQSLOD=2.7985;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:81.26:1019,81,0	0/0:6,0:6:18:0,18,169	0/1:18,0:14:16.75:17,0,73	0/0:15,0:14:24.30:0,24,198	0/0:31,0:31:84.18:0,84,856	0/0:32,0:32:96.20:0,96,972	0/0:15,0:15:42.08:0,42,422	0/0:42,0:42:99:0,99,997	0/0:24,0:24:72.12:0,72,718	0/0:19,0:19:51.09:0,51,509	0/0:27,0:27:69.13:0,69,693	0/0:23,0:23:63.09:0,63,627	1/1:0,19:19:42.13:528,42,0	0/0:28,0:28:84.17:0,84,846	0/0:24,0:24:69.13:0,69,692	0/0:24,0:24:63.12:0,63,634	0/0:16,0:16:48.07:0,48,475	1/1:1,15:16:36.12:453,36,0	0/0:36,0:36:93.19:0,93,939	0/0:36,0:36:93.16:0,93,934	0/0:12,0:12:30.07:0,30,305	0/0:13,0:13:36.08:0,36,366	1/1:1,20:21:48.62:598,49,0	1/1:6,20:26:54.17:679,54,0	0/0:21,0:21:57.07:0,57,559	0/0:23,0:23:60.12:0,60,606	0/0:45,0:44:99:0,123,1238	0/0:13,0:13:30.07:0,30,306
chr10	71453568	.	AACACAC	A	235.66	PASS	AB=0.962;AC=10;AF=0.192;AN=52;BaseQRankSum=3.914;DP=485;FS=1.777;HRun=0;HaplotypeScore=97.4254;InbreedingCoeff=0.4345;MQ=63.49;MQ0=10;MQRankSum=-0.585;QD=2.43;ReadPosRankSum=0.505;VQSLOD=1.5948;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:5.32:5,0,506	1/1:4,3:7:3.01:60,3,0	./.	./.	0/0:11,0:12:9.03:0,9,166	0/0:16,0:17:21.06:0,21,338	0/0:20,0:21:5.58:0,6,137	0/0:27,0:27:8.94:0,9,137	0/0:11,0:11:6.02:0,6,170	1/1:11,0:12:0.88:2,1,0	1/1:8,1:9:3.01:60,3,0	0/0:10,0:9:8.74:0,9,185	0/0:13,0:13:18.06:0,18,424	0/0:10,0:10:19.59:0,20,377	0/0:9,0:9:9.03:0,9,179	0/0:11,0:12:12.04:0,12,301	0/1:22,2:22:76.06:109,0,76	0/0:22,0:23:32.75:0,33,695	0/0:12,0:11:15.04:0,15,244	0/0:13,0:15:18.06:0,18,399	0/0:34,0:34:18:0,18,325	0/0:7,0:7:9:0,9,122	0/0:12,0:12:9.03:0,9,209	0/0:24,0:25:32.24:0,32,747	1/1:10,5:15:6.02:121,6,0	0/0:15,0:15:12.04:0,12,356	0/0:18,0:18:14.36:0,14,422	0/0:5,0:5:12.04:0,12,291
chr10	71454232	.	ATTG	A	4514.88	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=12.746;DP=820;FS=5.056;HRun=0;HaplotypeScore=114.7216;InbreedingCoeff=0.9999;MQ=85.28;MQ0=0;MQRankSum=-4.420;QD=43.41;ReadPosRankSum=4.206;VQSLOD=6.6606;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,2314	0/0:13,0:13:36.12:0,36,830	0/0:25,0:25:69.21:0,69,1468	0/0:27,0:27:75.22:0,75,1440	0/0:28,0:28:84.27:0,84,1890	0/0:37,0:37:99:0,108,2490	0/0:38,0:38:99:0,111,2418	0/0:54,0:53:99:0,151,3383	0/0:37,0:37:99:0,111,2557	0/0:35,0:35:96.33:0,96,2137	0/0:12,0:12:36.12:0,36,812	0/0:26,0:26:66.23:0,66,1509	1/1:0,31:31:87.30:1465,87,0	0/0:28,0:28:84.29:0,84,1885	0/0:36,0:36:99:0,108,2425	0/0:27,0:27:81.28:0,81,1847	0/0:31,0:31:93.32:0,93,2098	1/1:0,18:18:45.15:767,45,0	0/0:16,0:16:45.15:0,45,1022	0/0:42,0:42:99:0,120,2699	0/0:47,0:47:99:0,135,3093	0/0:38,0:38:99:0,111,2412	1/1:0,20:20:50.92:869,51,0	1/1:0,35:35:84.29:1413,84,0	0/0:24,0:24:66.23:0,66,1521	0/0:26,0:26:72.22:0,72,1527	0/0:29,0:29:84.27:0,84,1825	./.
chr10	71454736	.	C	CTT	700.61	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=2.889;DP=507;FS=0.628;HRun=14;HaplotypeScore=79.0984;InbreedingCoeff=0.7347;MQ=75.14;MQ0=0;MQRankSum=-1.877;QD=10.62;ReadPosRankSum=-0.840;VQSLOD=2.2692;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:11.35:0,11,235	0/0:10,0:12:23.69:0,24,229	0/0:20,0:15:3.87:0,4,25	0/0:18,0:13:1.98:0,2,51	0/0:23,0:27:25.88:0,26,234	0/0:22,0:21:41.60:0,42,351	0/0:11,0:11:23.89:0,24,200	0/0:21,0:24:10.32:0,10,257	0/0:18,0:18:32.69:0,33,276	0/0:24,0:24:44.65:0,45,375	0/0:19,0:23:39.69:0,40,376	0/1:6,0:7:5.31:5,0,59	1/1:6,15:21:14.88:196,15,0	0/0:7,0:8:6.11:0,6,62	0/0:14,0:14:29.79:0,30,251	0/0:12,0:12:20.87:0,21,175	0/0:19,0:19:41.85:0,42,351	1/1:2,5:7:14.08:163,14,0	0/0:24,0:28:51.10:0,51,424	0/0:27,0:27:41.47:0,41,340	0/0:9,0:9:20.54:0,21,161	0/0:13,0:16:17.46:0,17,179	1/1:10,7:18:29.86:333,30,0	1/1:3,10:13:12.04:157,12,0	0/0:25,0:29:47.33:0,47,426	0/0:30,0:32:52.42:0,52,456	0/0:17,0:17:6.62:0,7,202	0/0:7,0:7:20.96:0,21,171
chr10	71455949	.	A	ATAAAT	1692.73	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-0.678;DP=292;FS=7.833;HRun=0;HaplotypeScore=54.3158;InbreedingCoeff=0.6973;MQ=70.01;MQ0=12;MQRankSum=-1.367;QD=30.23;ReadPosRankSum=-0.816;VQSLOD=2.1510;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:11:9.03:233,9,0	0/0:5,0:5:4.24:0,4,136	0/1:14,0:7:12.11:12,0,21	0/0:7,0:6:8.95:0,9,71	0/0:12,0:12:33.09:0,33,641	0/0:17,0:15:39.13:0,39,765	0/0:6,0:6:15.05:0,15,241	0/0:28,0:24:56.24:0,56,1255	0/0:9,0:9:27.09:0,27,530	0/0:16,0:15:31.23:0,31,643	0/0:12,0:12:27.03:0,27,522	0/0:7,0:7:21.07:0,21,372	1/1:1,2:3:6.02:194,6,0	0/0:11,0:9:23.48:0,23,444	0/0:2,0:2:6.02:0,6,133	0/0:13,0:13:39.12:0,39,724	0/0:19,0:19:35.16:0,35,577	1/1:2,14:17:32.78:950,33,0	0/0:7,0:7:21.03:0,21,350	0/0:10,0:10:30.06:0,30,613	0/0:6,0:6:15.03:0,15,291	0/0:3,0:3:9.03:0,9,170	1/1:5,4:9:15.05:365,15,0	1/1:0,1:1:3.01:97,3,0	0/0:14,0:14:16.70:0,17,460	0/0:12,0:11:33.11:0,33,688	0/0:17,0:16:45.15:0,45,938	0/0:2,0:1:3.01:0,3,36
chr10	71455952	.	T	TA	1343.05	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=-4.510;DP=300;FS=4.697;HRun=10;HaplotypeScore=37.6950;InbreedingCoeff=0.6708;MQ=71.86;MQ0=10;MQRankSum=0.425;QD=11.99;ReadPosRankSum=1.291;VQSLOD=2.3825;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:8.83:55,9,0	1/1:0,5:5:11.96:114,12,0	0/1:15,0:8:7.78:8,0,21	0/0:8,0:6:11.65:0,12,71	0/0:12,0:12:17.92:0,18,145	0/0:16,0:14:35.94:0,36,293	0/0:7,0:7:14.97:0,15,123	0/0:28,1:27:33.86:0,34,476	0/0:9,0:9:23.97:0,24,197	1/1:3,14:17:41.90:411,42,0	1/1:2,10:12:24.02:244,24,0	0/0:8,0:8:23.96:0,24,195	0/0:4,0:3:3.59:0,4,10	0/0:11,0:9:16.55:0,17,164	0/0:2,0:2:3:0,3,25	0/0:15,0:15:41.92:0,42,339	1/1:2,18:20:39.10:416,39,0	0/1:16,0:16:3.85:4,0,36	0/0:7,0:7:17.97:0,18,147	0/0:10,0:10:20.96:0,21,172	0/0:6,0:6:14.95:0,15,119	0/0:3,0:3:8.99:0,9,74	0/0:7,0:7:1.98:0,2,42	0/0:1,0:1:2.04:0,2,6	1/1:3,10:14:26.90:270,27,0	0/0:13,0:12:26.95:0,27,222	0/0:17,0:17:49.97:0,50,396	0/0:2,0:1:3:0,3,25
chr10	71456106	.	GAC	G	373.55	PASS	AB=0.914;AC=22;AF=0.458;AN=48;BaseQRankSum=4.872;DP=396;FS=10.539;HRun=0;HaplotypeScore=55.3293;InbreedingCoeff=-0.0127;MQ=62.18;MQ0=7;MQRankSum=-0.594;QD=1.46;ReadPosRankSum=0.819;VQSLOD=0.3323;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:24:0.47:1,0,0	1/1:4,0:5:2.84:14,3,0	./.	./.	0/1:12,2:14:23.32:23,0,56	0/1:10,0:10:26.42:26,0,35	0/1:20,1:21:28.29:28,0,265	0/0:17,0:15:2.96:0,3,19	0/1:13,0:13:58.22:58,0,96	./.	1/1:7,0:11:5.27:21,5,0	0/0:10,0:10:18.03:0,18,240	0/0:10,0:10:12.03:0,12,151	0/1:16,0:17:17.88:18,0,156	1/1:4,2:9:11.84:102,12,0	0/1:9,5:15:65.83:66,0,178	1/1:15,0:22:11.36:56,11,0	0/1:16,4:21:57.84:58,0,127	0/0:12,0:11:5.84:0,6,39	0/0:8,0:8:15.03:0,15,198	0/1:29,0:29:12.63:13,0,75	0/1:8,1:8:23.32:23,0,59	0/0:11,0:11:8.90:0,9,101	0/1:17,1:24:2.29:2,0,241	1/1:5,0:9:2.84:14,3,0	0/0:8,0:6:5.23:0,5,51	0/0:12,0:11:26.68:0,27,317	./.
chr10	71456912	.	G	GTTTGTT	10070.05	PASS	AB=0.935;AC=21;AF=0.375;AN=56;BaseQRankSum=-1.379;DP=665;FS=11.784;HRun=0;HaplotypeScore=128.2057;InbreedingCoeff=0.9076;MQ=56.60;MQ0=8;MQRankSum=-9.418;QD=37.57;ReadPosRankSum=-0.329;VQSLOD=4.0472;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,15:26:31.86:964,32,0	1/1:1,9:12:18.06:543,18,0	0/0:27,0:19:47.66:0,48,727	0/0:18,0:15:31.15:0,31,462	0/0:36,0:36:87.25:0,87,1568	0/0:39,0:39:93.29:0,93,1792	0/0:23,0:23:51.07:0,51,945	0/0:21,0:21:42.12:0,42,614	0/0:16,0:16:39.12:0,39,735	1/1:10,20:33:69.20:1727,69,0	1/1:6,23:30:66.18:1544,66,0	0/0:16,0:16:36.11:0,36,704	1/1:10,10:23:30.10:988,30,0	0/0:20,0:20:54.18:0,54,1078	0/0:24,0:24:63.19:0,63,1230	0/0:25,0:25:57.19:0,57,1123	1/1:9,12:24:21.07:637,21,0	1/1:10,8:20:9.03:299,9,0	0/0:25,0:22:42.13:0,42,752	0/0:29,0:28:78.27:0,78,1564	0/0:23,0:23:51.17:0,51,1061	0/0:15,0:15:45.13:0,45,784	1/1:5,25:30:42.61:1277,43,0	1/1:4,7:12:18.02:475,18,0	1/1:6,18:25:48.16:1588,48,0	0/1:27,0:29:28.01:28,0,1238	0/0:34,0:34:87.29:0,87,1635	0/0:5,0:5:12.04:0,12,231
chr10	71459966	.	A	AGGAGAG	9530.02	PASS	AB=0.813;AC=20;AF=0.357;AN=56;BaseQRankSum=0.805;DP=686;FS=12.678;HRun=0;HaplotypeScore=152.5829;InbreedingCoeff=0.8195;MQ=75.18;MQ0=2;MQRankSum=-13.148;QD=36.37;ReadPosRankSum=1.013;VQSLOD=3.8878;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,27:35:42.10:1280,42,0	1/1:2,9:11:20.83:699,21,0	0/1:35,0:26:27.36:27,0,459	0/0:55,0:44:69.17:0,69,1134	0/0:41,0:41:99:0,114,2388	0/0:18,0:18:54.17:0,54,1122	0/0:22,0:22:60.15:0,60,1121	0/0:38,0:38:81.24:0,81,1538	0/0:20,0:20:60.21:0,60,1283	1/1:6,14:21:39.12:1053,39,0	1/1:4,29:33:48.16:1545,48,0	0/0:14,0:14:39.09:0,39,713	1/1:7,24:32:54.19:1827,54,0	0/0:23,0:23:63.22:0,63,1327	0/0:15,0:15:39.13:0,39,827	0/0:18,0:18:51.16:0,51,1021	0/1:12,16:30:38.20:1078,0,38	1/1:2,3:6:6.02:203,6,0	0/0:19,0:19:45.15:0,45,854	0/0:32,0:32:84.27:0,84,1723	0/0:22,0:22:54.18:0,54,1183	0/0:23,0:23:69.23:0,69,1405	1/1:5,16:21:15:407,15,0	1/1:3,8:13:12.04:406,12,0	1/1:4,18:24:30.10:1005,30,0	0/0:26,0:26:75.26:0,75,1615	0/0:30,0:30:81.26:0,81,1675	0/0:7,0:7:21.07:0,21,430
chr10	71461125	.	TCA	T	3814.46	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.519;DP=634;FS=1.333;HRun=0;HaplotypeScore=76.8896;InbreedingCoeff=0.9937;MQ=65.94;MQ0=0;MQRankSum=0.005;QD=34.68;ReadPosRankSum=1.317;VQSLOD=5.8729;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,28:32:84.28:1136,84,0	0/0:11,0:11:24.08:0,24,416	0/0:33,0:28:81.18:0,81,1307	0/0:23,2:24:17.41:0,17,897	0/0:24,0:24:66.23:0,66,1152	0/0:27,0:27:78.27:0,78,1366	0/0:15,0:15:42.11:0,42,675	0/0:27,0:27:72.22:0,72,1157	0/0:22,0:22:66.21:0,66,1129	0/0:25,0:25:72.25:0,72,1240	0/0:21,0:21:60.18:0,60,1017	0/0:29,0:29:81.20:0,81,1275	1/1:1,19:20:48.16:649,48,0	0/0:25,0:25:66.21:0,66,1119	0/0:17,0:17:48.15:0,48,809	0/0:16,0:16:45.14:0,45,756	0/0:31,0:31:84.29:0,84,1472	1/1:2,16:18:45.15:609,45,0	0/0:25,0:25:69.22:0,69,1176	0/0:17,0:17:42.14:0,42,731	0/0:21,0:21:51.17:0,51,886	0/0:19,0:19:48.16:0,48,822	1/1:0,15:15:42.61:569,43,0	1/1:2,23:25:63.21:852,63,0	0/0:28,0:28:78.27:0,78,1356	0/0:24,0:24:72.24:0,72,1234	0/0:37,0:37:99:0,105,1785	0/0:5,0:5:15.05:0,15,263
chr10	71461432	.	GTGTT	G	3718.94	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.650;DP=718;FS=0.000;HRun=0;HaplotypeScore=113.9301;InbreedingCoeff=0.9869;MQ=71.49;MQ0=6;MQRankSum=1.086;QD=28.61;ReadPosRankSum=1.664;VQSLOD=3.1686;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,25:41:66.23:1069,66,0	0/0:5,0:5:15.04:0,15,316	0/0:32,0:26:24.08:0,24,553	0/0:29,0:26:24.55:0,25,514	0/0:22,0:22:51.15:0,51,1149	0/0:31,0:31:63.22:0,63,1504	0/0:23,0:22:57.20:0,57,1334	0/0:32,0:31:45.15:0,45,1035	0/0:20,0:20:42.14:0,42,1016	0/0:35,0:35:69.24:0,69,1654	0/0:25,0:25:39.11:0,39,888	0/0:34,0:34:78.27:0,78,1883	1/1:7,20:27:54.18:875,54,0	0/0:23,0:23:42.13:0,42,960	0/0:15,0:15:30.10:0,30,699	0/0:23,0:23:51.18:0,51,1235	0/0:33,0:33:60.21:0,60,1431	1/1:7,7:14:21.06:317,21,0	0/0:25,0:24:27.09:0,27,654	0/0:21,0:21:48.16:0,48,1145	0/0:21,0:21:45.15:0,45,1066	0/0:28,0:28:72.25:0,72,1666	1/1:4,13:17:30.10:486,30,0	1/1:8,23:31:60.20:972,60,0	0/0:31,0:30:57.20:0,57,1380	0/0:21,0:21:45.15:0,45,1034	0/0:40,0:38:81.28:0,81,1901	0/0:19,0:19:12.04:0,12,291
chr10	71466274	.	G	GTGGA	3783.15	PASS	AB=0.818;AC=22;AF=0.423;AN=52;BaseQRankSum=-5.045;DP=760;FS=0.000;HRun=0;HaplotypeScore=122.9740;InbreedingCoeff=0.7769;MQ=62.52;MQ0=14;MQRankSum=0.439;QD=11.00;ReadPosRankSum=-0.517;VQSLOD=2.5773;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:38,5:43:24.70:720,25,0	1/1:6,5:11:2.84:70,3,0	./.	./.	0/0:32,0:32:39.08:0,39,523	0/0:21,0:21:30.06:0,30,385	0/0:21,0:21:14.95:0,15,139	0/1:46,0:42:10.75:11,0,12	0/0:31,0:31:51.11:0,51,688	1/1:15,5:20:18.05:333,18,0	1/1:14,0:14:9:137,9,0	0/0:28,0:28:41.84:0,42,560	1/1:19,12:33:14.69:349,15,0	0/0:33,0:33:50.88:0,51,663	0/0:37,0:37:75.08:0,75,904	0/0:32,0:32:54.13:0,54,732	0/1:20,26:47:77.01:537,0,77	1/1:33,4:37:36.17:614,36,0	0/0:20,0:18:18.05:0,18,237	1/1:18,8:26:23.86:313,24,0	0/0:42,0:42:51.13:0,51,688	0/0:13,0:13:18.03:0,18,232	1/1:5,3:8:6.02:140,6,0	1/1:16,15:32:9.03:210,9,0	1/1:9,14:25:15.05:350,15,0	0/0:35,0:34:33.11:0,33,494	0/0:21,0:21:42.02:0,42,501	0/0:8,0:6:18.06:0,18,268
chr10	71466747	.	G	GTAACT	7568.23	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-1.525;DP=611;FS=3.061;HRun=0;HaplotypeScore=127.9164;InbreedingCoeff=0.9833;MQ=78.14;MQ0=1;MQRankSum=-10.009;QD=72.77;ReadPosRankSum=-2.368;VQSLOD=5.9454;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:78.27:0,78,1599	1/1:0,9:9:24.08:736,24,0	0/0:21,0:21:36.52:0,37,980	0/0:24,0:24:57.19:0,57,1154	0/0:24,0:24:66.23:0,66,1338	0/0:23,0:23:66.23:0,66,1354	0/0:21,0:21:57.18:0,57,1127	0/0:25,0:25:66.23:0,66,1360	0/0:15,0:15:39.13:0,39,791	1/1:7,18:25:72.25:2089,72,0	1/1:8,11:19:45.14:1065,45,0	0/0:19,0:19:48.15:0,48,945	0/0:21,0:21:60.21:0,60,1230	0/0:19,0:19:51.17:0,51,1057	0/0:24,0:24:63.22:0,63,1305	0/0:20,0:20:57.17:0,57,1103	1/1:12,16:28:66.18:1880,66,0	0/0:18,0:18:45.15:0,45,923	0/0:18,0:18:45.13:0,45,852	0/0:16,0:16:42.14:0,42,870	0/0:57,0:57:99:0,163,3320	0/0:17,0:17:48.15:0,48,931	0/0:21,0:21:51.18:0,51,1056	0/0:18,0:18:9.36:0,9,644	1/1:6,16:22:63.22:1798,63,0	0/0:20,0:20:54.19:0,54,1119	0/0:30,0:30:87.30:0,87,1804	0/0:5,0:5:15.05:0,15,311
chr10	71466799	.	GCACA	G	1278.97	PASS	AB=0.972;AC=14;AF=0.269;AN=52;BaseQRankSum=8.136;DP=621;FS=2.234;HRun=0;HaplotypeScore=158.3187;InbreedingCoeff=0.5047;MQ=64.12;MQ0=9;MQRankSum=-7.433;QD=7.80;ReadPosRankSum=0.218;VQSLOD=2.9707;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:35:56.76:0,57,1057	0/0:8,0:8:8.86:0,9,190	./.	./.	0/0:19,0:19:17.78:0,18,320	0/1:16,0:16:4.66:5,0,278	0/0:21,0:23:20.54:0,21,377	0/0:24,0:25:8.73:0,9,85	0/1:12,1:13:22.85:23,0,311	0/0:28,0:28:44.07:0,44,719	1/1:17,0:17:0.46:1,0,0	0/0:23,0:26:36.84:0,37,680	1/1:11,13:24:42.11:613,42,0	0/0:13,0:13:24.02:0,24,400	0/1:23,1:24:46.71:47,0,789	0/0:16,0:19:44.36:0,44,882	0/0:27,0:27:8.40:0,8,97	1/1:7,9:16:24.05:339,24,0	0/1:10,0:10:28.48:28,0,65	0/0:18,0:20:38.87:0,39,832	0/0:44,0:49:55.84:0,56,920	0/0:20,0:20:33.11:0,33,779	1/1:15,8:23:18.87:221,19,0	1/1:16,5:21:12.04:167,12,0	0/0:27,0:28:3.40:0,3,176	0/0:16,0:16:30.23:0,30,558	0/0:19,0:21:29.41:0,29,506	0/0:7,0:6:9.03:0,9,198
chr10	71466810	.	C	CTTAT	4473.70	PASS	AB=0.907;AC=12;AF=0.214;AN=56;BaseQRankSum=9.496;DP=660;FS=26.817;HRun=0;HaplotypeScore=154.8530;InbreedingCoeff=0.1796;MQ=52.94;MQ0=13;MQRankSum=-10.526;QD=20.81;ReadPosRankSum=-0.914;VQSLOD=2.7753;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:37:83.38:0,83,1398	0/1:9,0:9:24.38:24,0,176	0/0:24,0:11:29.31:0,29,502	0/0:34,0:11:29.58:0,30,465	0/0:24,0:24:63.15:0,63,1111	0/0:21,0:21:48.13:0,48,878	0/0:23,0:23:57.18:0,57,1096	0/0:20,0:19:54.18:0,54,1008	0/0:23,0:23:54.65:0,55,1014	0/1:25,3:28:99:789,0,584	0/1:11,4:15:45.98:118,0,46	0/0:32,0:30:74.98:0,75,1366	0/1:28,0:28:9.79:685,0,10	0/0:15,0:15:39.13:0,39,785	0/0:27,0:27:66.10:0,66,1285	0/0:19,0:19:57.19:0,57,1110	0/1:17,5:23:46.77:408,0,47	1/1:16,0:16:31.93:557,32,0	0/0:14,0:13:33.10:0,33,609	0/0:25,0:25:66.22:0,66,1280	0/0:51,0:51:99:0,126,2423	0/0:25,0:25:60.19:0,60,1210	0/1:25,0:25:99:730,0,100	1/1:18,3:21:32.54:422,33,0	0/1:25,3:29:45.18:738,0,45	0/1:18,1:19:2.70:3,0,1047	0/0:25,0:25:60.56:0,61,1064	0/0:4,0:3:9.03:0,9,187
chr10	71466842	.	CTTAT	C	289.31	PASS	AB=0.842;AC=3;AF=0.054;AN=56;BaseQRankSum=4.242;DP=666;FS=24.314;HRun=0;HaplotypeScore=153.0014;InbreedingCoeff=-0.0664;MQ=50.96;MQ0=13;MQRankSum=-3.806;QD=4.45;ReadPosRankSum=-2.244;VQSLOD=0.6933;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:42:28.46:0,28,1732	0/0:12,0:12:33.58:0,34,789	0/0:21,0:8:22.31:0,22,445	0/0:14,0:2:3.01:0,3,66	0/0:18,0:18:48.07:0,48,1079	0/0:17,0:17:36.43:0,36,799	0/0:18,3:21:2.98:0,3,1084	0/0:26,0:25:39.73:0,40,1479	0/0:23,0:23:27.07:0,27,1041	0/1:15,3:20:99:168,0,1031	0/0:16,3:19:32.72:0,33,814	0/0:32,0:31:73.70:0,74,1839	0/0:29,0:28:74.36:0,74,1145	0/0:14,0:15:39.13:0,39,906	0/0:29,0:29:74.39:0,74,1729	0/0:25,0:25:75.26:0,75,1808	0/0:24,1:26:24.52:0,25,1287	0/0:15,0:15:35.30:0,35,461	0/1:16,0:14:3.61:4,0,817	0/0:35,0:35:89.64:0,90,2299	0/0:41,1:41:97.27:0,97,2005	0/0:32,0:32:78.72:0,79,1908	0/0:19,0:19:38.04:0,38,717	0/0:22,1:23:34.45:0,34,594	0/1:18,11:28:99:209,0,977	0/0:31,1:32:12.95:0,13,2037	0/0:25,1:26:71.73:0,72,1644	0/0:5,0:4:11.91:0,12,262
chr10	71467835	.	GC	G	4341.83	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.379;DP=638;FS=2.042;HRun=6;HaplotypeScore=65.6354;InbreedingCoeff=0.9973;MQ=77.84;MQ0=0;MQRankSum=-3.069;QD=28.38;ReadPosRankSum=2.952;VQSLOD=5.6037;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:33:84.21:903,84,0	1/1:1,10:11:30.08:322,30,0	0/0:20,0:20:54.64:0,55,693	0/0:9,0:9:20.99:0,21,242	0/0:31,0:31:90.28:0,90,1169	0/0:25,0:25:66.21:0,66,868	0/0:12,0:12:36.12:0,36,473	0/0:35,0:35:90.27:0,90,1158	0/0:18,0:18:51.17:0,51,671	1/1:0,29:29:87.19:924,87,0	1/1:2,25:27:63.16:677,63,0	0/0:23,0:23:66.21:0,66,868	0/0:29,0:29:87.24:0,87,1111	0/0:28,0:28:78.25:0,78,1025	0/0:29,0:29:84.27:0,84,1105	0/0:27,0:27:78.25:0,78,1026	1/1:2,26:28:69.17:742,69,0	0/0:16,0:16:48.16:0,48,629	0/0:16,0:16:42.14:0,42,553	0/0:29,0:29:87.27:0,87,1131	0/0:11,0:11:33.11:0,33,434	0/0:18,0:18:51.17:0,51,670	0/0:21,0:21:60.20:0,60,789	0/0:20,0:20:60.15:0,60,769	1/1:1,24:25:72.18:774,72,0	0/0:29,0:29:81.25:0,81,1051	0/0:33,0:33:96.29:0,96,1234	0/0:6,0:6:18.06:0,18,237
chr10	71467948	.	AT	A	18303.07	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=10.835;DP=642;FS=3.105;HRun=2;HaplotypeScore=97.8460;InbreedingCoeff=0.9996;MQ=86.11;MQ0=0;MQRankSum=-6.255;QD=36.39;ReadPosRankSum=3.589;VQSLOD=5.2215;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:41:99:1441,111,0	1/1:0,8:8:24.08:312,24,0	0/0:24,0:24:72.14:0,72,977	0/0:19,0:19:42.52:0,43,585	1/1:0,32:32:93.30:1207,93,0	1/1:0,22:22:63.20:818,63,0	1/1:0,14:14:42.14:545,42,0	1/1:3,13:16:39.10:477,39,0	1/1:1,27:28:81.26:1051,81,0	1/1:1,19:20:57.19:740,57,0	1/1:0,18:18:54.18:701,54,0	1/1:0,25:25:69.22:896,69,0	0/0:23,0:23:69.22:0,69,1003	1/1:0,26:26:78.25:1013,78,0	1/1:0,18:18:51.17:662,51,0	1/1:0,25:25:75.24:974,75,0	1/1:1,22:23:63.20:817,63,0	0/0:22,0:22:66.22:0,66,989	1/1:0,16:16:48.15:610,48,0	1/1:1,30:31:84.27:1091,84,0	1/1:1,28:29:78.25:1013,78,0	1/1:1,19:20:51.17:662,51,0	0/0:34,0:34:99:0,99,1478	0/0:17,0:17:51.17:0,51,764	1/1:0,20:20:54.18:701,54,0	1/1:1,23:24:69.22:896,69,0	1/1:1,26:27:75.24:973,75,0	1/1:0,20:20:54.18:701,54,0
chr10	71468224	.	A	AAACG	8850.47	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.982;DP=665;FS=10.155;HRun=0;HaplotypeScore=103.4496;InbreedingCoeff=0.9932;MQ=80.00;MQ0=0;MQRankSum=-5.185;QD=67.56;ReadPosRankSum=3.446;VQSLOD=7.1568;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:44:99:2987,108,0	1/1:0,8:11:24.08:693,24,0	0/0:23,0:23:58.91:0,59,1262	0/0:26,0:26:69.17:0,69,1262	0/0:28,0:28:78.27:0,78,1634	0/0:16,0:16:48.16:0,48,992	0/0:32,0:32:96.31:0,96,1957	0/0:53,0:53:99:0,153,3015	0/0:18,0:18:54.19:0,54,1131	1/1:1,17:20:51.15:1384,51,0	1/1:1,4:6:12:250,12,0	0/0:30,0:30:84.24:0,84,1638	0/0:21,0:21:63.20:0,63,1266	0/0:15,0:15:45.15:0,45,943	0/0:30,0:30:90.31:0,90,1871	0/0:18,0:18:51.16:0,51,1031	1/1:0,27:30:84.29:2415,84,0	0/0:23,0:23:66.23:0,66,1383	0/0:20,0:20:60.18:0,60,1218	0/0:24,0:24:69.22:0,69,1408	0/0:31,0:31:90.26:0,90,1775	0/0:16,0:16:48.16:0,48,977	0/0:29,0:29:84.22:0,84,1716	0/0:24,0:24:69.19:0,69,1351	1/1:1,13:18:39.13:1121,39,0	0/0:24,0:24:69.23:0,69,1411	0/0:20,0:20:60.19:0,60,1217	0/0:13,0:13:39.13:0,39,817
chr10	71468349	.	TTTGA	T	5401.09	PASS	AC=28;AF=0.519;AN=54;BaseQRankSum=8.509;DP=502;FS=1.077;HRun=0;HaplotypeScore=94.6182;InbreedingCoeff=0.9367;MQ=62.58;MQ0=4;MQRankSum=0.960;QD=20.85;ReadPosRankSum=5.867;VQSLOD=4.0549;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:48.12:0,48,982	1/1:4,8:12:21.07:331,21,0	0/0:26,0:18:12:0,12,165	0/0:31,0:23:24.55:0,25,420	0/0:16,0:16:21.07:0,21,468	0/0:19,0:19:36.12:0,36,854	0/0:15,0:15:30.10:0,30,671	0/0:25,0:25:18.06:0,18,356	0/0:11,0:11:18.06:0,18,421	1/1:11,11:22:33.11:500,33,0	1/1:11,9:20:14.17:234,14,0	0/0:12,0:12:15.05:0,15,355	1/1:6,6:12:6.02:94,6,0	0/0:15,0:15:30.10:0,30,669	0/0:20,0:20:30.10:0,30,656	0/0:14,0:14:24.08:0,24,551	1/1:15,9:24:33.11:515,33,0	1/1:3,9:12:21.07:330,21,0	1/1:11,4:15:11.99:165,12,0	1/1:8,15:22:29.58:513,30,0	./.	0/0:8,0:8:12.04:0,12,285	1/1:5,13:18:24.08:378,24,0	1/1:6,15:21:27.09:425,27,0	1/1:6,16:22:36.12:567,36,0	1/1:9,21:29:60.20:943,60,0	1/1:11,8:20:24.07:359,24,0	1/1:8,0:8:3.01:47,3,0
chr10	71469448	.	TA	T	4305.98	PASS	AB=0.919;AC=19;AF=0.339;AN=56;BaseQRankSum=13.357;DP=613;FS=1.994;HRun=8;HaplotypeScore=59.8525;InbreedingCoeff=0.9480;MQ=81.08;MQ0=1;MQRankSum=-2.975;QD=20.70;ReadPosRankSum=1.576;VQSLOD=5.1464;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.16:0,66,761	1/1:0,10:10:30.05:290,30,0	0/0:22,0:20:44.98:0,45,485	0/0:19,0:19:31.76:0,32,369	0/0:27,0:27:75.22:0,75,895	0/0:20,0:20:51.16:0,51,616	0/0:17,0:17:45.11:0,45,518	0/0:36,0:36:93.26:0,93,1094	0/0:27,0:27:78.23:0,78,926	1/1:6,17:23:48.03:452,48,0	1/1:1,22:23:57.09:550,57,0	0/0:22,0:22:60.17:0,60,706	1/1:0,10:10:30.05:290,30,0	0/0:22,0:22:57.17:0,57,689	0/0:20,0:20:57.16:0,57,677	0/0:25,0:25:66.19:0,66,786	1/1:1,33:34:87.14:840,87,0	1/1:1,17:18:41.86:405,42,0	0/0:28,0:28:69.11:0,69,814	0/0:28,0:28:72.22:0,72,870	0/0:11,0:11:33.07:0,33,374	0/0:16,0:16:45.13:0,45,534	1/1:3,18:21:51.08:492,51,0	1/1:0,8:8:24.04:232,24,0	1/1:0,27:27:78.13:753,78,0	0/1:31,3:34:2.48:2,0,803	0/0:28,0:28:81.23:0,81,955	0/0:12,0:12:36.11:0,36,435
chr10	71472658	.	AG	A	490.09	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.606;DP=550;FS=19.087;HRun=3;HaplotypeScore=56.4533;InbreedingCoeff=0.9960;MQ=76.76;MQ0=0;MQRankSum=-1.524;QD=20.42;ReadPosRankSum=1.747;VQSLOD=2.1842;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:53.18:585,53,0	0/0:8,0:8:24.08:0,24,344	0/0:23,0:23:69.14:0,69,892	0/0:17,0:17:43.50:0,44,534	0/0:17,0:17:51.04:0,51,679	0/0:14,0:14:42.13:0,42,583	0/0:24,0:24:72.24:0,72,1035	0/0:18,0:18:39.10:0,39,499	0/0:21,0:21:60.16:0,60,840	0/0:14,0:14:42.13:0,42,589	0/0:12,0:12:33.10:0,33,457	0/0:27,0:27:78.26:0,78,1105	0/0:22,0:22:66.16:0,66,898	0/0:23,0:23:69.18:0,69,950	0/0:24,0:24:72.24:0,72,1036	0/0:24,0:24:72.21:0,72,1014	0/0:26,0:26:75.23:0,75,1059	0/0:25,0:25:69.23:0,69,993	0/0:20,0:20:51.15:0,51,692	0/0:16,0:16:42.12:0,42,568	0/0:23,0:23:69.22:0,69,974	0/0:15,0:15:45.15:0,45,647	0/0:13,0:13:33.11:0,33,466	0/0:23,0:23:66.21:0,66,931	0/0:13,0:13:33.11:0,33,474	0/0:22,0:22:63.21:0,63,904	0/0:33,0:33:99:0,99,1423	0/0:9,0:9:27.06:0,27,350
chr10	71474319	.	TAC	T	800.48	PASS	AB=0.947;AC=14;AF=0.259;AN=54;BaseQRankSum=2.785;DP=700;FS=0.563;HRun=0;HaplotypeScore=126.3881;InbreedingCoeff=-0.1961;MQ=48.98;MQ0=37;MQRankSum=0.419;QD=2.58;ReadPosRankSum=-0.222;VQSLOD=2.2098;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,12:40:37.32:403,37,0	./.	0/0:28,0:13:6.02:0,6,90	0/0:51,0:16:3.01:0,3,35	0/1:16,0:15:11.24:11,0,236	0/1:27,2:27:27.16:27,0,452	0/1:21,1:22:68.36:68,0,465	0/1:34,1:27:58.30:58,0,268	0/1:31,2:32:99:113,0,653	0/0:25,0:20:15.47:0,15,180	0/0:11,0:10:5.98:0,6,47	0/1:28,4:32:88.09:88,0,585	0/0:20,0:18:14.08:0,14,144	0/0:15,0:25:17.97:0,18,173	0/1:16,1:18:52.94:53,0,319	0/0:18,0:18:31.91:0,32,440	0/0:20,0:20:8.39:0,8,52	0/0:7,0:15:18:0,18,157	0/1:16,0:10:24.78:25,0,83	0/1:19,1:19:4.22:4,0,363	0/0:71,3:73:13:0,13,1295	0/1:16,3:19:41.55:42,0,258	0/0:12,0:11:5.98:0,6,47	0/0:38,0:37:12.14:0,12,109	0/0:22,0:23:16.53:0,17,146	0/1:19,0:19:46.38:46,0,298	0/1:9,0:9:15.02:15,0,212	0/0:13,0:13:27.06:0,27,392
chr10	71474340	.	ACACACACACCATG	A	1339.29	PASS	AB=0.923;AC=13;AF=0.232;AN=56;BaseQRankSum=0.827;DP=766;FS=5.982;HRun=0;HaplotypeScore=226.7589;InbreedingCoeff=0.3383;MQ=43.63;MQ0=93;MQRankSum=-2.651;QD=7.48;ReadPosRankSum=1.037;VQSLOD=1.3919;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:37:53.12:0,53,711	1/1:5,0:4:0.47:1,0,0	0/0:50,0:6:6.02:0,6,92	0/0:68,0:5:2.87:0,3,15	0/0:20,0:16:22.31:0,22,391	0/0:21,0:19:45.14:0,45,921	0/0:24,0:24:60.13:0,60,1116	0/0:31,0:19:17.57:0,18,186	0/0:33,0:32:77.34:0,77,2087	1/1:25,3:22:10.90:575,11,0	1/1:8,1:6:5.71:48,6,0	0/0:34,0:32:47.88:0,48,1732	0/1:23,1:19:99:214,0,292	0/1:30,0:27:53.77:54,0,429	0/0:19,0:19:26.98:0,27,1001	0/0:21,0:21:48.14:0,48,1267	0/1:11,8:18:60.41:121,0,60	0/1:20,0:19:99:116,0,478	0/0:21,0:10:8.47:0,8,303	0/0:15,0:14:30.10:0,30,798	0/0:91,0:83:99:0,118,3494	0/0:16,0:16:27.09:0,27,713	0/1:19,1:14:34.74:39,0,35	0/0:42,0:37:27.23:0,27,542	1/1:18,6:23:15.59:327,16,0	0/0:21,0:20:27.31:0,27,719	0/0:10,0:10:27.07:0,27,704	0/0:11,0:11:8.09:0,8,637
chr10	71474348	.	A	ACACACA	1888.57	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=4.064;DP=753;FS=14.444;HRun=0;HaplotypeScore=165.4436;InbreedingCoeff=0.5554;MQ=42.85;MQ0=107;MQRankSum=-1.481;QD=5.54;ReadPosRankSum=-0.149;VQSLOD=1.8849;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:8.83:9,0,339	1/1:3,0:3:3.01:65,3,0	0/0:56,0:6:6.02:0,6,92	0/0:75,0:5:2.88:0,3,15	0/0:16,0:12:17.92:0,18,327	0/0:19,0:18:23:0,23,566	0/0:23,0:24:6.66:0,7,526	0/0:32,0:19:17.67:0,18,186	0/0:31,0:32:36.78:0,37,967	1/1:27,0:21:41.85:727,42,0	1/1:8,0:6:5.99:49,6,0	0/0:33,0:31:8.36:0,8,846	1/1:22,0:18:30.40:384,30,0	0/1:28,0:26:56.13:66,0,56	0/0:17,0:18:1.37:0,1,468	0/0:18,0:18:16.92:0,17,317	1/1:15,0:17:5.95:150,6,0	1/1:23,0:22:9.62:152,10,0	0/0:21,0:9:9.02:0,9,119	0/0:15,0:14:29.99:0,30,512	0/1:92,0:83:21.73:22,0,1368	0/0:11,0:11:20.86:0,21,296	1/1:20,0:14:4.25:51,4,0	1/1:27,7:33:7.53:96,8,0	1/1:20,0:22:17.23:305,17,0	0/0:15,0:16:18.02:0,18,304	0/0:10,0:10:15.49:0,15,214	0/0:11,0:11:5.08:0,5,408
chr10	71474353	.	GCA	G	260.33	PASS	AB=0.688;AC=1;AF=0.018;AN=56;BaseQRankSum=3.369;DP=737;FS=0.977;HRun=0;HaplotypeScore=125.8039;InbreedingCoeff=0.2621;MQ=42.48;MQ0=118;MQRankSum=-0.181;QD=7.89;ReadPosRankSum=-0.075;VQSLOD=3.4773;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,15:31:25.57:334,0,26	0/0:4,0:3:0.96:0,1,2	0/0:63,0:6:9.03:0,9,137	0/0:83,0:5:6.02:0,6,99	0/0:16,0:11:13.26:0,13,174	0/0:20,0:19:42.14:0,42,675	0/0:24,0:24:51.16:0,51,809	0/0:34,0:21:42.08:0,42,619	0/0:31,1:30:40:0,40,1082	0/0:24,0:17:12.46:0,12,303	0/0:7,0:3:0:0,0,0	0/0:38,0:35:81.63:0,82,1250	0/0:21,0:17:29.64:0,30,496	0/0:23,0:21:24.08:0,24,396	0/0:17,0:17:24.08:0,24,395	0/0:19,0:19:48.16:0,48,776	0/0:18,0:17:4.51:0,5,111	0/0:21,0:20:41.35:0,41,650	0/0:21,0:8:12.04:0,12,188	0/0:15,0:15:24.07:0,24,371	0/0:83,0:74:99:0,154,2489	0/0:9,1:10:21.06:0,21,322	0/0:21,0:14:8.51:0,9,100	0/0:32,0:26:30.10:0,30,496	0/0:22,0:21:10.59:0,11,154	0/0:16,0:15:39.05:0,39,551	0/0:8,0:8:24.08:0,24,396	0/0:9,0:9:23.91:0,24,344
chr10	71474386	.	ACCATG	A	530.91	PASS	AB=0.750;AC=5;AF=0.089;AN=56;BaseQRankSum=4.301;DP=700;FS=1.877;HRun=0;HaplotypeScore=146.9251;InbreedingCoeff=0.2256;MQ=43.16;MQ0=108;MQRankSum=-4.301;QD=8.43;ReadPosRankSum=-1.263;VQSLOD=2.5767;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:29.08:0,29,549	1/1:4,2:5:2.29:72,2,0	0/0:63,0:7:21.04:0,21,327	0/0:66,0:5:15.04:0,15,209	0/0:12,0:8:5.36:0,5,158	0/0:17,0:16:42.19:0,42,1196	0/0:26,0:25:60.16:0,60,1506	0/0:45,0:26:65.28:0,65,1507	0/0:27,0:27:50.27:0,50,1519	0/1:10,8:15:99:331,0,170	0/0:7,2:5:0.67:0,1,1	0/0:34,0:29:72.67:0,73,1779	0/0:20,0:16:33.05:0,33,713	0/0:21,0:18:33.11:0,33,849	0/0:16,0:15:39:0,39,1001	0/0:21,0:21:59.46:0,59,1451	0/1:11,1:13:99:222,0,148	0/0:21,0:20:8.39:0,8,1059	0/0:17,0:7:21.07:0,21,552	0/0:13,0:13:29.78:0,30,691	0/0:88,2:85:99:0,197,4442	0/0:7,0:7:21.07:0,21,573	0/0:19,0:14:15:0,15,239	0/0:31,0:28:44.85:0,45,933	0/1:16,9:25:15.90:16,0,30	0/0:14,0:12:30.10:0,30,879	0/0:12,0:12:36:0,36,726	0/0:5,0:5:15.03:0,15,315
chr10	71474391	.	GCA	G	336.62	PASS	AB=0.925;AC=16;AF=0.308;AN=52;BaseQRankSum=2.088;DP=685;FS=3.282;HRun=0;HaplotypeScore=125.9611;InbreedingCoeff=-0.2209;MQ=42.98;MQ0=93;MQRankSum=0.449;QD=0.90;ReadPosRankSum=-0.769;VQSLOD=2.5078;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:26:0.47:1,0,0	0/0:6,0:5:0.31:0,0,22	./.	./.	0/1:8,3:8:27.36:27,0,39	0/0:16,0:17:29.88:0,30,337	0/1:20,1:23:65.61:66,0,221	0/1:42,0:26:4.96:5,0,84	0/1:27,2:28:36.79:37,0,150	0/0:21,0:18:20.44:0,20,127	0/0:10,0:5:0.63:0,1,2	0/0:33,0:28:42.08:0,42,529	0/1:18,0:14:12.25:39,0,12	0/1:23,1:21:12.64:13,0,201	0/0:17,0:16:21.04:0,21,276	0/1:20,0:20:47.68:48,0,247	0/0:15,0:14:5.98:0,6,47	0/0:20,0:23:44.65:0,45,433	0/1:14,2:7:26.70:27,0,44	0/1:11,2:13:18.34:18,0,146	0/1:84,1:79:70.70:71,0,905	0/0:6,0:6:2.99:0,3,24	1/1:18,0:12:5.64:31,6,0	0/1:31,0:28:56.41:67,0,56	0/0:29,0:28:13.71:0,14,71	0/0:17,0:15:27.49:0,27,323	0/1:8,1:10:29.47:29,0,119	0/0:5,0:4:2.99:0,3,24
chr10	71474418	.	C	CACAT	769.23	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=8.771;DP=625;FS=0.000;HRun=0;HaplotypeScore=146.9805;InbreedingCoeff=0.7052;MQ=48.61;MQ0=39;MQRankSum=-4.298;QD=7.12;ReadPosRankSum=1.648;VQSLOD=2.5567;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:8.87:0,9,60	1/1:5,7:11:8.68:151,9,0	0/0:21,0:3:2.84:0,3,14	0/0:15,0:3:2.80:0,3,13	0/0:11,0:11:23.98:0,24,237	0/0:22,0:21:51.98:0,52,639	0/0:26,0:25:53.80:0,54,662	0/0:24,0:16:33.34:0,33,314	0/0:21,0:21:28.62:0,29,455	1/1:23,0:22:26.35:370,26,0	0/0:9,2:8:0.47:0,0,1	0/0:36,0:32:15.48:0,15,638	0/0:16,0:14:32.97:0,33,380	0/0:23,0:20:41.90:0,42,458	0/0:20,0:19:44.77:0,45,553	0/0:20,0:20:51.02:0,51,641	1/1:17,1:18:9.70:217,10,0	0/1:27,0:27:61.40:61,0,213	0/0:23,0:19:49.03:0,49,427	0/0:15,0:15:33.02:0,33,406	0/0:91,0:87:99:0,183,2353	0/0:7,0:7:17.87:0,18,170	0/0:14,0:12:20.98:0,21,221	0/0:32,0:30:57:0,57,701	1/1:18,5:25:8.03:118,8,0	0/0:21,0:21:35.46:0,35,542	0/0:12,0:12:35.64:0,36,368	0/0:10,0:8:23.92:0,24,206
chr10	71474421	.	ACACACACGCGCGCG	A	489.23	PASS	AB=0.929;AC=5;AF=0.089;AN=56;BaseQRankSum=5.466;DP=600;FS=11.945;HRun=0;HaplotypeScore=225.2698;InbreedingCoeff=0.0827;MQ=49.97;MQ0=29;MQRankSum=-5.246;QD=4.89;ReadPosRankSum=-0.930;VQSLOD=1.3424;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,12:21:18.02:104,0,18	0/1:12,0:11:2.39:76,0,2	0/0:13,0:2:2.90:0,3,16	0/0:9,0:1:3:0,3,27	0/0:11,0:11:27.09:0,27,1101	0/0:24,0:23:57.67:0,58,2551	0/0:26,0:25:60.20:0,60,2322	0/0:23,0:16:45.14:0,45,1280	0/0:21,0:21:45.63:0,46,1833	0/1:22,0:22:99:134,0,192	0/0:10,0:8:0.08:0,0,0	0/0:31,0:29:78.27:0,78,3508	0/0:16,0:15:39.13:0,39,1160	0/0:21,0:19:42.14:0,42,1934	0/0:19,0:18:45.14:0,45,1909	0/0:20,0:20:51.16:0,51,2185	0/1:18,0:18:44.40:213,0,44	0/0:29,0:28:69.07:0,69,2044	0/0:24,0:21:47.82:0,48,1375	0/0:16,0:16:39.13:0,39,1604	0/0:87,0:83:99:0,190,8164	0/0:8,0:8:24.08:0,24,851	0/0:12,0:11:21.07:0,21,568	0/0:34,0:32:69.11:0,69,2186	0/1:26,0:25:29.46:78,0,29	0/0:23,0:23:11.56:0,12,2039	0/0:13,0:13:39.12:0,39,1429	0/0:10,0:8:24.06:0,24,849
chr10	71474427	.	ACGCGCG	A	1050.10	PASS	AB=0.935;AC=10;AF=0.179;AN=56;BaseQRankSum=5.242;DP=560;FS=9.472;HRun=0;HaplotypeScore=142.9736;InbreedingCoeff=0.5218;MQ=52.35;MQ0=20;MQRankSum=-5.278;QD=9.63;ReadPosRankSum=1.422;VQSLOD=1.5632;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:3.01:56,3,0	0/1:9,1:10:2.34:122,0,2	0/0:14,0:3:4.23:0,4,25	0/1:10,0:3:10.46:10,0,42	0/0:12,0:12:30.10:0,30,640	0/0:25,0:24:57.20:0,57,1532	0/0:26,0:26:63.03:0,63,1477	0/0:19,0:17:48.04:0,48,937	0/0:19,0:20:42.14:0,42,882	1/1:9,5:14:13.80:356,14,0	0/0:4,3:6:0.62:0,1,1	0/0:39,0:38:99:0,102,2495	0/0:14,0:15:35.15:0,35,354	0/0:16,0:16:36.59:0,37,992	0/0:17,0:17:39.13:0,39,1069	0/0:19,0:19:45.15:0,45,1181	1/1:14,2:16:7.94:434,8,0	0/0:26,0:25:65.69:0,66,1060	0/0:26,0:23:45.15:0,45,980	0/0:16,0:16:41.17:0,41,1024	0/0:79,0:76:99:0,180,4612	0/0:8,0:8:24.08:0,24,575	0/0:8,0:10:23.80:0,24,248	0/0:29,0:33:56.58:0,57,648	0/1:19,1:19:2.23:202,0,2	0/1:23,1:24:14.12:14,0,1057	0/0:12,0:12:10.64:0,11,707	0/0:10,0:8:24.06:0,24,571
chr10	71476947	.	G	GTGC	2864.76	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-6.814;DP=602;FS=3.460;HRun=0;HaplotypeScore=91.4324;InbreedingCoeff=0.8769;MQ=75.69;MQ0=1;MQRankSum=-0.845;QD=28.94;ReadPosRankSum=3.522;VQSLOD=3.6290;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:18.03:229,18,0	0/0:7,0:7:12.04:0,12,167	0/0:28,0:27:36.11:0,36,487	0/0:26,0:25:27.09:0,27,367	0/0:14,0:14:9.03:0,9,126	0/0:18,0:18:24.06:0,24,319	0/0:31,0:31:75.20:0,75,1000	0/0:30,0:30:45.13:0,45,601	0/0:18,0:18:39.13:0,39,547	0/0:21,0:21:33.11:0,33,463	0/0:10,0:10:5.99:0,6,84	0/0:20,0:20:45.12:0,45,598	1/1:8,19:28:57.20:1117,57,0	0/0:31,0:31:72.22:0,72,992	0/0:22,0:22:48.16:0,48,674	0/0:35,0:37:87.19:0,87,1159	0/0:28,0:27:60.18:0,60,823	1/1:4,8:12:27.09:532,27,0	0/0:13,0:13:6.01:0,6,69	0/0:22,0:22:21.07:0,21,295	0/0:33,0:32:53.53:0,54,707	0/0:17,0:17:27.08:0,27,364	0/1:9,0:9:0:0,0,0	1/1:3,20:24:57.20:1143,57,0	0/0:16,0:16:21.06:0,21,278	0/0:17,0:17:18.06:0,18,252	0/0:34,0:35:69.20:0,69,946	0/0:8,0:8:21.07:0,21,295
chr10	71477404	.	AAAAAAGAAAAAG	A	1604.56	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=3.091;DP=571;FS=3.863;HRun=0;HaplotypeScore=174.8730;InbreedingCoeff=0.6653;MQ=58.32;MQ0=21;MQRankSum=-0.924;QD=13.26;ReadPosRankSum=-7.195;VQSLOD=0.2170;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:5:19.40:163,0,19	1/1:5,0:5:14.98:201,15,0	0/0:52,0:11:6.76:0,7,80	0/0:45,0:14:21.21:0,21,269	0/0:38,0:38:97.98:0,98,3533	0/0:19,0:19:1.86:0,2,1868	0/0:25,0:24:43.53:0,44,1624	0/0:36,0:35:73.43:0,73,1997	0/0:12,0:12:32.66:0,33,949	1/1:2,16:18:37.91:337,38,0	1/1:14,0:14:29.28:363,29,0	0/0:14,0:12:30.07:0,30,988	0/0:14,0:13:6.83:0,7,872	0/1:12,0:12:34.55:35,0,569	0/0:16,0:16:37.11:0,37,1227	0/0:17,0:17:42.13:0,42,1442	1/1:25,0:25:26.29:227,26,0	0/0:25,0:24:43.85:0,44,1549	0/0:31,0:28:14.08:0,14,2219	0/0:19,0:19:38.73:0,39,1615	0/0:7,0:6:14.93:0,15,536	0/0:15,0:15:39.12:0,39,1607	0/0:16,0:14:26.94:0,27,951	0/0:12,0:12:18.51:0,19,517	1/1:12,0:11:27.04:456,27,0	0/0:29,0:29:87.19:0,87,2779	0/1:30,0:30:0.49:0,0,1802	0/0:8,0:8:18.06:0,18,699
chr10	71477408	.	AAG	A	616.59	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=9.309;DP=556;FS=3.790;HRun=0;HaplotypeScore=86.2238;InbreedingCoeff=0.6994;MQ=56.13;MQ0=21;MQRankSum=-1.712;QD=6.56;ReadPosRankSum=-4.330;VQSLOD=1.4853;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:8:28.56:32,0,29	1/1:4,1:5:10.66:71,11,0	0/0:43,0:8:9.28:0,9,81	0/0:40,0:11:14.65:0,15,105	0/0:37,0:37:38.03:0,38,1090	0/0:18,0:18:6.05:0,6,462	0/0:24,0:23:55.64:0,56,705	0/0:37,0:36:21.39:0,21,694	0/0:13,0:13:27.77:0,28,404	1/1:18,0:18:21.07:144,21,0	1/1:12,2:14:30.29:224,30,0	0/0:14,0:12:25.95:0,26,373	0/0:14,0:13:3.13:0,3,247	0/1:12,0:12:14.07:14,0,227	0/0:16,0:16:32.66:0,33,442	0/0:18,0:18:31.98:0,32,594	1/1:24,0:24:20.41:134,20,0	0/0:24,0:23:44.65:0,45,691	0/0:30,1:28:28.55:0,29,860	0/0:19,0:19:46.88:0,47,625	0/0:8,0:7:7.24:0,7,177	0/0:13,0:13:38.83:0,39,506	0/0:16,0:14:29.03:0,29,388	0/0:10,0:9:17.55:0,18,234	1/1:12,1:12:21.87:174,22,0	0/0:30,0:30:50.62:0,51,956	0/0:28,0:28:41.83:0,42,726	0/0:8,0:8:13.68:0,14,242
chr10	71477411	.	AAAAAG	A	742.87	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=7.517;DP=552;FS=0.000;HRun=0;HaplotypeScore=113.6420;InbreedingCoeff=0.6033;MQ=54.70;MQ0=19;MQRankSum=-0.934;QD=6.30;ReadPosRankSum=-4.759;VQSLOD=0.6001;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:39.20:53,0,39	1/1:3,2:5:8.97:92,9,0	0/0:37,0:8:6.84:0,7,68	0/0:36,0:10:11.40:0,11,57	0/0:37,0:37:62.82:0,63,1716	0/0:19,0:19:14.57:0,15,830	0/0:26,0:25:56.98:0,57,1093	0/0:38,0:37:53.05:0,53,1098	0/0:12,0:12:29.61:0,30,522	1/1:18,0:18:3.97:114,4,0	1/1:14,0:14:23.85:271,24,0	0/0:14,0:12:30.01:0,30,544	0/0:12,0:11:24.46:0,24,415	0/1:12,0:12:30.76:31,0,321	0/0:14,0:14:19.15:0,19,702	0/0:18,0:18:29.96:0,30,811	1/1:10,14:24:3.68:49,4,0	0/0:23,0:22:31.23:0,31,672	0/0:31,0:28:54.74:0,55,1298	0/0:17,0:17:44.98:0,45,851	0/0:8,0:7:7.41:0,7,314	0/0:15,0:15:45.13:0,45,1001	0/1:18,0:16:2.40:2,0,464	0/0:10,0:9:14.50:0,15,212	1/1:14,1:14:25.43:294,25,0	0/0:31,0:31:76.88:0,77,1450	0/0:28,0:28:44.95:0,45,1046	0/0:8,0:8:18.06:0,18,423
chr10	71477416	.	G	GA	1031.29	PASS	AB=0.979;AC=19;AF=0.339;AN=56;BaseQRankSum=1.466;DP=514;FS=0.585;HRun=11;HaplotypeScore=81.6922;InbreedingCoeff=0.6351;MQ=54.51;MQ0=16;MQRankSum=-2.415;QD=5.46;ReadPosRankSum=-2.522;VQSLOD=1.3915;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:13.28:0,13,50	1/1:3,1:4:5.99:52,6,0	0/0:22,0:5:5.03:0,5,29	0/0:30,0:9:2.34:0,2,55	0/1:33,1:35:2.75:3,0,306	0/0:18,0:18:13.84:0,14,115	0/0:23,0:24:40.78:0,41,291	0/0:37,0:36:44.49:0,44,327	0/0:11,0:11:17.90:0,18,139	1/1:18,0:18:15:90,15,0	1/1:7,3:10:14.80:113,15,0	0/0:12,0:11:11.90:0,12,93	1/1:8,5:12:14.23:124,14,0	0/0:12,0:12:17.15:0,17,123	0/0:14,0:14:23.78:0,24,176	0/0:17,0:17:2.18:0,2,121	0/1:18,0:18:17.19:17,0,37	1/1:13,8:21:25.32:304,25,0	0/0:29,0:26:41.85:0,42,311	0/0:19,0:19:14.71:0,15,108	0/0:8,0:7:8.92:0,9,66	0/0:15,0:15:41.80:0,42,321	1/1:8,10:16:1.02:190,1,0	1/1:5,4:8:12.50:122,12,0	1/1:13,3:15:25.35:199,25,0	0/0:28,0:28:46.18:0,46,337	0/1:26,1:27:5.15:5,0,130	0/0:9,0:9:11.78:0,12,93
chr10	71478035	.	T	TAAG	12015.96	PASS	AB=0.950;AC=21;AF=0.375;AN=56;BaseQRankSum=-12.008;DP=748;FS=4.639;HRun=0;HaplotypeScore=105.2560;InbreedingCoeff=0.9293;MQ=85.60;MQ0=0;MQRankSum=-5.699;QD=48.65;ReadPosRankSum=1.338;VQSLOD=7.1483;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,39:44:96.28:2066,96,0	1/1:3,12:15:45.12:933,45,0	0/0:25,0:25:72.18:0,72,1067	0/0:24,0:24:53.48:0,53,727	0/0:40,0:40:99:0,114,1847	0/0:23,0:23:66.23:0,66,1096	0/0:35,0:35:87.30:0,87,1435	0/0:36,0:36:99:0,99,1619	0/0:30,0:30:90.29:0,90,1474	1/1:4,29:35:99:2151,99,0	1/1:3,15:19:45.15:955,45,0	0/0:26,0:26:72.25:0,72,1194	1/1:1,26:30:75.22:1642,75,0	0/0:33,0:33:93.30:0,93,1517	0/0:36,0:36:99:0,99,1645	0/0:34,0:34:99:0,99,1621	1/1:2,20:23:54.19:1217,54,0	1/1:0,9:9:27.05:551,27,0	0/0:20,0:20:60.21:0,60,995	0/0:30,0:30:84.29:0,84,1394	0/0:25,0:25:72.25:0,72,1193	0/1:18,1:19:10.58:11,0,814	1/1:4,17:22:47.99:996,48,0	1/1:1,14:15:24.08:544,24,0	1/1:1,14:16:42.14:951,42,0	0/0:34,1:35:31.45:0,31,1528	0/0:34,0:34:99:0,99,1615	0/0:15,0:15:45.15:0,45,750
chr10	71478784	.	A	AGACAGACACC	2690.06	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.415;DP=707;FS=8.079;HRun=0;HaplotypeScore=206.4966;InbreedingCoeff=0.9993;MQ=85.17;MQ0=0;MQRankSum=-7.223;QD=84.06;ReadPosRankSum=0.928;VQSLOD=2.9687;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,15:32:53.86:2785,54,0	0/0:16,0:16:48.16:0,48,1619	0/0:26,0:26:78.20:0,78,2009	0/0:23,0:23:60.20:0,60,1876	0/0:25,0:25:72.24:0,72,2395	0/0:18,0:18:51.18:0,51,1767	0/0:35,0:35:99:0,105,3346	0/0:31,0:31:87.27:0,87,2709	0/0:22,0:22:60.16:0,60,1842	0/0:37,0:37:99:0,108,3196	0/0:24,0:24:72.22:0,72,2153	0/0:28,0:28:78.25:0,78,2547	0/0:20,0:20:60.18:0,60,1963	0/0:30,0:30:90.30:0,90,2832	0/0:34,0:34:99:0,99,3198	0/0:27,0:27:81.27:0,81,2682	0/0:33,0:33:99:0,99,3268	0/0:22,0:22:63.22:0,63,2082	0/0:13,0:13:39.12:0,39,1214	0/0:28,0:28:78.25:0,78,2340	0/0:38,0:38:99:0,114,3569	0/0:18,0:18:54.18:0,54,1675	0/0:23,0:22:69.21:0,69,2116	0/0:29,0:29:87.30:0,87,2919	0/0:12,0:12:36.12:0,36,1240	0/0:25,0:25:75.26:0,75,2271	0/0:28,0:27:84.28:0,84,2725	0/0:10,0:10:30.10:0,30,1036
chr10	71479935	.	G	GC	575.70	PASS	AC=12;AF=0.300;AN=40;BaseQRankSum=-5.002;DP=73;FS=0.000;HRun=3;HaplotypeScore=11.9980;InbreedingCoeff=0.6025;MQ=93.04;MQ0=1;MQRankSum=-0.978;QD=28.78;ReadPosRankSum=-0.947;VQSLOD=2.0393;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:4:12.04:168,12,0	./.	0/0:3,0:3:9.03:0,9,102	0/0:10,0:10:27.08:0,27,318	0/0:1,0:1:3.01:0,3,36	0/0:1,0:1:3.01:0,3,36	0/0:6,0:6:18.05:0,18,214	0/0:3,0:3:9.02:0,9,98	./.	1/1:1,1:2:3.01:42,3,0	1/1:1,3:3:9.03:126,9,0	0/0:2,0:2:3.01:0,3,36	./.	0/0:4,0:4:9.03:0,9,108	0/0:4,0:4:12.04:0,12,144	0/0:2,0:2:6.02:0,6,72	1/1:0,7:7:21.07:293,21,0	./.	0/0:2,0:2:2.90:0,3,16	0/0:6,0:6:15.05:0,15,180	0/0:5,0:5:15.05:0,15,180	0/0:1,0:1:3.01:0,3,36	1/1:0,2:2:3.01:42,3,0	1/1:0,1:1:3.01:42,3,0	./.	./.	./.	./.
chr10	71480091	.	TA	T	789.81	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.583;DP=511;FS=12.234;HRun=5;HaplotypeScore=47.7572;InbreedingCoeff=0.9669;MQ=80.46;MQ0=0;MQRankSum=-4.080;QD=23.23;ReadPosRankSum=1.425;VQSLOD=1.8494;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,29:34:78.22:885,78,0	0/0:9,0:9:27.09:0,27,369	0/0:11,0:11:29.96:0,30,377	0/0:17,0:17:42.14:0,42,567	0/0:28,0:28:78.23:0,78,1033	0/0:17,0:17:51.16:0,51,681	0/0:24,0:24:66.21:0,66,886	0/0:26,0:26:75.25:0,75,1025	0/0:23,0:23:66.20:0,66,885	0/0:11,0:11:27.08:0,27,355	0/0:12,0:12:36.12:0,36,489	0/0:15,0:15:45.15:0,45,615	0/0:15,0:15:42.14:0,42,573	0/0:22,0:22:63.20:0,63,846	0/0:22,0:22:63.19:0,63,833	0/0:19,0:19:54.18:0,54,738	0/0:24,0:24:69.18:0,69,906	0/0:28,0:28:81.27:0,81,1106	0/0:17,0:17:51.16:0,51,681	0/0:10,0:10:30.09:0,30,393	0/0:20,0:20:54.07:0,54,710	0/0:12,0:12:36.12:0,36,491	0/0:13,0:13:39.13:0,39,532	0/0:29,0:29:84.28:0,84,1148	0/0:21,0:21:63.20:0,63,844	0/0:13,0:13:36.12:0,36,492	0/0:15,0:15:42.14:0,42,574	0/0:4,0:4:12.04:0,12,163
chr10	71481945	.	AAAC	A	3870.49	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.434;DP=761;FS=11.550;HRun=0;HaplotypeScore=109.8074;InbreedingCoeff=0.9993;MQ=64.19;MQ0=0;MQRankSum=-1.218;QD=38.70;ReadPosRankSum=3.850;VQSLOD=4.6237;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,3022	0/0:15,0:15:45.14:0,45,940	0/0:41,0:29:84.24:0,84,1519	0/0:18,0:15:27.97:0,28,617	0/0:36,0:36:99:0,108,2305	0/0:27,0:26:81.26:0,81,1690	0/0:31,0:31:93.31:0,93,1990	0/0:31,0:31:82.79:0,83,1716	0/0:22,0:22:66.22:0,66,1346	0/0:36,0:36:99:0,108,2272	0/0:12,0:12:30.10:0,30,657	0/0:25,0:25:70.85:0,71,1601	1/1:3,24:27:57.20:972,57,0	0/0:25,0:25:72.24:0,72,1550	0/0:40,0:40:99:0,114,2485	0/0:25,0:25:75.26:0,75,1711	0/0:26,1:27:27.09:0,27,1632	1/1:2,22:24:43.56:955,44,0	0/0:24,0:24:72.24:0,72,1479	0/0:20,0:20:60.20:0,60,1306	0/0:20,0:20:60.21:0,60,1384	0/0:35,0:35:99:0,105,2250	1/1:0,19:19:38.58:664,39,0	1/1:0,30:30:75.26:1279,75,0	0/0:19,0:19:54.18:0,54,1178	0/0:32,0:32:93.31:0,93,2035	0/0:32,0:32:93.29:0,93,1984	0/0:20,0:20:54.08:0,54,1056
chr10	71482357	.	G	GA	3204.43	PASS	AB=0.909;AC=11;AF=0.196;AN=56;BaseQRankSum=-9.196;DP=619;FS=8.315;HRun=8;HaplotypeScore=57.0085;InbreedingCoeff=0.8795;MQ=59.54;MQ0=6;MQRankSum=1.574;QD=22.41;ReadPosRankSum=-0.613;VQSLOD=3.6030;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,138,1262	1/1:0,8:8:15.04:173,15,0	0/1:8,1:6:9.44:9,0,88	0/0:9,0:5:9:0,9,81	0/0:25,0:26:68.06:0,68,606	0/0:22,0:23:63.03:0,63,576	0/0:20,0:20:51.03:0,51,465	0/0:21,0:21:57.03:0,57,521	0/0:16,0:16:36:0,36,329	1/1:3,28:30:73.76:824,74,0	1/1:2,25:27:69.08:747,69,0	0/0:20,0:20:42:0,42,380	0/0:14,0:13:29.98:0,30,269	0/0:21,0:21:57.02:0,57,517	0/0:24,0:23:69.01:0,69,625	0/0:24,0:24:59.99:0,60,541	1/1:3,36:39:93.28:1073,93,0	0/0:24,0:25:66.36:0,66,599	0/0:18,0:17:42.01:0,42,381	0/0:25,0:25:63.02:0,63,576	0/0:12,0:12:33.02:0,33,302	0/0:20,0:20:48.02:0,48,439	0/0:22,0:22:57.03:0,57,521	0/0:25,0:25:63.02:0,63,576	1/1:8,20:27:22.86:554,23,0	0/0:29,1:30:28.39:0,28,510	0/0:18,0:18:51.03:0,51,466	0/0:6,0:6:18.01:0,18,165
chr10	71482802	.	C	CT	1300.44	PASS	AB=0.810;AC=10;AF=0.179;AN=56;BaseQRankSum=-7.212;DP=654;FS=2.307;HRun=12;HaplotypeScore=69.9918;InbreedingCoeff=0.7554;MQ=68.19;MQ0=1;MQRankSum=-0.806;QD=10.16;ReadPosRankSum=1.405;VQSLOD=3.2116;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,28:38:19.28:511,19,0	0/0:9,0:9:20.85:0,21,151	0/0:19,0:12:13.21:0,13,103	0/1:16,0:13:4.70:5,0,47	0/0:31,0:31:68.05:0,68,502	0/0:24,0:25:58.68:0,59,419	0/0:19,0:22:46.37:0,46,322	0/0:37,1:38:45.13:0,45,481	0/0:18,0:18:20.48:0,20,280	0/0:21,0:23:37.70:0,38,268	0/0:32,0:32:72.24:0,72,496	0/0:29,3:32:41.83:0,42,459	1/1:8,18:27:11.05:254,11,0	0/0:21,0:21:49.50:0,49,341	0/0:24,0:24:56.61:0,57,415	0/0:30,0:30:68.54:0,69,501	0/0:23,0:25:62.52:0,63,449	0/1:7,11:18:48.47:224,0,48	0/0:20,0:21:40.09:0,40,271	0/0:21,3:25:26:0,26,392	0/0:16,0:16:32.67:0,33,232	0/0:24,0:24:62.47:0,62,450	1/1:4,16:20:36.53:351,37,0	1/1:2,7:9:12.02:117,12,0	0/0:18,0:19:49.73:0,50,352	0/0:24,0:24:53.64:0,54,390	0/0:26,1:27:33.42:0,33,405	0/0:20,0:21:46.75:0,47,334
chr10	71483443	.	GTGTT	G	3081.72	PASS	AB=0.948;AC=20;AF=0.370;AN=54;BaseQRankSum=11.753;DP=622;FS=10.051;HRun=0;HaplotypeScore=123.8832;InbreedingCoeff=0.7703;MQ=66.38;MQ0=2;MQRankSum=-0.785;QD=14.40;ReadPosRankSum=1.338;VQSLOD=2.7820;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:5,3:8:6.02:94,6,0	0/0:30,0:22:2.98:0,3,22	0/0:45,0:33:8.99:0,9,141	0/0:23,0:23:48.15:0,48,1089	0/0:26,0:26:54.17:0,54,1192	0/0:25,0:25:30.44:0,30,920	0/0:20,0:20:21.54:0,22,461	0/1:19,1:20:5:5,0,881	1/1:15,17:32:45.13:663,45,0	1/1:5,10:15:30.10:460,30,0	0/0:23,0:23:51.18:0,51,1189	1/1:8,0:18:20.96:195,21,0	0/1:16,1:17:14.03:14,0,641	0/0:34,0:34:63.22:0,63,1463	0/0:40,0:40:81.71:0,82,1819	1/1:18,24:42:68.61:1047,69,0	1/1:10,0:18:14.34:139,14,0	0/0:20,0:20:12.04:0,12,285	0/0:22,0:22:45.11:0,45,1015	0/0:19,0:20:33.11:0,33,728	0/0:12,0:12:33.11:0,33,782	1/1:5,0:18:32.95:307,33,0	1/1:6,0:9:3:28,3,0	1/1:7,10:17:21.07:330,21,0	0/0:28,0:28:57.17:0,57,1221	0/0:27,1:28:16.04:0,16,1262	0/0:12,0:12:15.05:0,15,321
chr10	71483818	.	G	GC	905.70	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.636;DP=703;FS=16.834;HRun=6;HaplotypeScore=71.1298;InbreedingCoeff=0.9446;MQ=73.83;MQ0=0;MQRankSum=-5.205;QD=32.35;ReadPosRankSum=-0.341;VQSLOD=1.9853;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:81.22:1001,81,0	0/0:14,0:14:36.07:0,36,367	0/0:28,0:27:48.50:0,48,612	0/0:18,0:17:30.43:0,30,305	0/0:28,0:28:75.17:0,75,765	0/0:22,0:22:66.15:0,66,673	0/0:28,0:28:75.15:0,75,757	0/0:29,0:29:66.13:0,66,673	0/0:16,0:16:48.11:0,48,490	0/0:34,0:34:96.21:0,96,979	0/0:21,0:22:56.15:0,56,557	0/0:29,0:29:81.62:0,82,814	0/0:27,0:27:66.14:0,66,673	0/0:30,0:30:84.19:0,84,857	0/0:28,0:28:75.12:0,75,754	0/0:29,0:29:81.15:0,81,816	0/0:35,0:35:99:0,102,1024	0/0:16,0:16:42.09:0,42,428	0/0:17,0:17:48.09:0,48,482	0/0:23,0:23:66.14:0,66,667	0/0:37,0:37:99:0,105,1064	0/0:23,0:23:69.14:0,69,696	0/0:20,0:20:57.12:0,57,579	0/0:38,0:38:99:0,111,1133	0/0:24,0:24:72.16:0,72,735	0/0:30,0:30:87.20:0,87,887	0/0:21,0:21:63.14:0,63,642	0/0:9,0:9:9.02:0,9,92
chr10	71484538	.	AATGATG	A	1500.06	PASS	AB=0.708;AC=5;AF=0.096;AN=52;BaseQRankSum=7.778;DP=702;FS=2.611;HRun=0;HaplotypeScore=145.8588;InbreedingCoeff=0.7056;MQ=68.79;MQ0=3;MQRankSum=-8.407;QD=20.83;ReadPosRankSum=-0.433;VQSLOD=3.5402;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:15.05:0,15,403	0/0:11,0:11:18.06:0,18,557	./.	./.	0/0:39,0:39:81.25:0,81,2383	0/0:17,0:17:36.12:0,36,1105	0/0:24,0:24:36.11:0,36,1054	0/0:35,0:33:9.03:0,9,210	0/0:23,0:23:39.13:0,39,1250	0/0:26,0:26:54.18:0,54,1547	0/0:24,0:24:39.13:0,39,1123	0/0:27,0:27:54.17:0,54,1612	1/1:8,23:31:39.13:788,39,0	0/0:29,0:29:57.16:0,57,1629	0/0:37,0:37:69.24:0,69,2215	0/0:35,0:36:72.17:0,72,2145	0/0:20,0:20:39.13:0,39,1206	0/1:10,7:17:10.97:112,0,11	0/0:15,0:15:12.04:0,12,387	0/0:21,0:21:39.13:0,39,1253	0/0:19,0:19:33.08:0,33,864	0/0:24,0:24:48.15:0,48,1453	1/1:8,16:24:35.99:727,36,0	0/0:12,9:21:3.01:0,3,63	0/0:31,0:31:69.24:0,69,2216	0/0:38,0:38:54.19:0,54,1739	0/0:34,0:34:72.25:0,72,2285	0/0:21,0:21:42.09:0,42,1051
chr10	71487301	.	G	GTT	612.64	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.405;DP=748;FS=3.989;HRun=2;HaplotypeScore=94.2033;InbreedingCoeff=0.6525;MQ=43.00;MQ0=72;MQRankSum=-1.318;QD=13.61;ReadPosRankSum=0.179;VQSLOD=0.8121;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,38:33:39.13:707,39,0	0/0:15,0:13:30.10:0,30,441	0/0:25,0:4:6.02:0,6,87	0/0:24,0:1:3.01:0,3,43	0/0:22,0:19:33.04:0,33,422	0/0:20,0:19:33.11:0,33,485	0/0:26,0:23:27.01:0,27,337	0/0:23,0:17:48.09:0,48,640	0/0:26,0:26:54.18:0,54,789	0/0:32,0:28:78.26:0,78,1148	0/0:14,0:14:24.08:0,24,353	0/0:32,0:32:51.15:0,51,717	0/0:39,0:34:68.86:0,69,916	0/0:48,0:44:59.71:0,60,775	0/0:35,0:34:63.20:0,63,888	0/0:26,0:26:42.13:0,42,591	0/0:37,0:34:63.21:0,63,927	0/0:23,0:14:15.03:0,15,200	0/0:24,0:20:54.18:0,54,790	0/0:25,0:23:42.12:0,42,581	0/0:37,0:33:63.20:0,63,903	0/0:25,0:22:30.10:0,30,426	0/0:18,0:15:6.02:0,6,88	0/0:34,0:28:47.71:0,48,691	0/0:13,0:11:6.02:0,6,88	0/0:23,0:22:63.21:0,63,908	0/0:24,0:22:48.12:0,48,657	0/0:13,0:13:21.07:0,21,309
chr10	71488720	.	TA	T	2113.50	PASS	AB=0.850;AC=29;AF=0.537;AN=54;BaseQRankSum=6.550;DP=465;FS=7.092;HRun=14;HaplotypeScore=55.2614;InbreedingCoeff=0.4852;MQ=56.52;MQ0=8;MQRankSum=0.039;QD=6.82;ReadPosRankSum=5.369;VQSLOD=2.0518;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,30:34:57.34:394,57,0	1/1:3,14:17:10.73:214,11,0	0/0:9,0:4:4.76:0,5,45	./.	0/1:14,2:17:11.34:11,0,167	1/1:0,17:17:41.65:288,42,0	1/1:2,8:9:23.79:164,24,0	0/0:25,0:22:26:0,26,342	0/1:12,2:14:11.46:11,0,172	1/1:5,13:18:32.71:226,33,0	0/1:8,12:20:22.92:152,0,23	0/0:12,2:15:12.14:0,12,218	1/1:2,0:18:28.51:84,29,0	0/0:7,0:8:14.85:0,15,126	0/0:17,0:18:29.84:0,30,255	0/0:12,0:12:29.97:0,30,265	1/1:4,28:32:53.43:370,53,0	1/1:4,0:17:19.86:58,20,0	0/1:13,2:14:5.58:6,0,91	0/0:21,1:25:23.09:0,23,339	0/1:7,2:9:2.56:3,0,121	0/1:7,0:8:10.25:10,0,23	1/1:2,0:9:12.20:36,12,0	1/1:2,0:4:4.07:12,4,0	1/1:4,17:21:27.88:257,28,0	0/1:24,5:29:15.21:15,0,285	0/0:19,1:21:29.26:0,29,376	0/0:16,0:16:41.57:0,42,336
chr10	71492232	.	G	GAAAA	158.68	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=3.499;DP=458;FS=5.430;HRun=0;HaplotypeScore=117.3181;InbreedingCoeff=0.2784;MQ=58.01;MQ0=13;MQRankSum=0.465;QD=2.89;ReadPosRankSum=-2.700;VQSLOD=1.4038;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,7:19:15.15:209,15,0	0/0:5,0:5:11.78:0,12,102	0/0:13,0:10:2.38:0,2,86	0/0:8,0:3:6.02:0,6,83	0/0:14,0:14:26.66:0,27,376	0/0:9,0:10:23.95:0,24,329	0/0:21,0:20:45.11:0,45,813	0/0:17,0:17:39.06:0,39,585	0/0:12,0:12:29.90:0,30,413	0/1:12,0:11:35.16:35,0,205	0/1:11,0:11:21.07:21,0,130	0/0:16,0:17:29.85:0,30,368	0/0:12,0:12:30.03:0,30,492	0/0:17,0:17:45.08:0,45,701	0/0:12,0:12:32.83:0,33,485	0/0:19,0:19:45.07:0,45,732	0/0:30,0:28:36.65:0,37,458	0/0:19,0:18:39.12:0,39,736	0/0:17,0:18:33.53:0,34,448	0/0:24,0:23:57.02:0,57,830	0/0:10,0:10:24.06:0,24,399	0/0:16,0:16:29.67:0,30,428	0/0:17,0:17:29.20:0,29,421	0/0:27,0:27:69:0,69,1329	0/1:12,0:11:11.82:12,0,129	0/0:17,0:15:32.99:0,33,552	0/0:20,0:20:36.08:0,36,617	0/0:24,0:23:47.91:0,48,902
chr10	71492233	.	GAAA	G	1074.66	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.122;DP=489;FS=2.975;HRun=15;HaplotypeScore=76.3315;InbreedingCoeff=0.9595;MQ=60.03;MQ0=12;MQRankSum=0.030;QD=14.93;ReadPosRankSum=7.186;VQSLOD=2.0616;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:42.97:0,43,617	0/0:8,0:8:21.03:0,21,289	0/0:16,0:12:27.81:0,28,234	0/0:9,0:4:6.02:0,6,101	0/0:11,0:13:28.17:0,28,367	0/0:9,0:10:26.97:0,27,368	0/0:19,0:20:46.36:0,46,767	0/0:14,0:19:54.07:0,54,821	0/0:9,0:11:23.93:0,24,289	0/0:10,0:17:39.10:0,39,588	0/0:6,0:17:33.07:0,33,473	0/0:16,0:16:38.93:0,39,535	1/1:3,8:12:20.70:213,21,0	0/0:19,0:19:47.82:0,48,551	0/0:11,0:12:18.04:0,18,288	0/0:16,0:18:33.02:0,33,505	0/0:12,0:30:36.02:0,36,458	1/1:3,14:18:35.85:359,36,0	0/0:20,0:18:26.84:0,27,367	0/0:22,0:24:55.25:0,55,800	0/0:8,0:10:23.99:0,24,313	0/0:15,0:18:36.08:0,36,618	1/1:5,10:15:14.87:168,15,0	1/1:3,18:26:26.24:493,26,0	0/0:10,0:14:36.09:0,36,530	0/0:16,0:17:39.05:0,39,566	0/0:17,0:21:51.06:0,51,762	0/0:22,0:23:56.76:0,57,812
chr10	71494969	.	A	ACA	1678	PASS	AB=1.000;AC=27;AF=0.519;AN=52;BaseQRankSum=3.427;DP=635;FS=2.722;HRun=0;HaplotypeScore=101.0198;InbreedingCoeff=0.0358;MQ=46.52;MQ0=24;MQRankSum=0.666;QD=3.59;ReadPosRankSum=0.663;VQSLOD=2.5227;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:24:18.71:71,0,19	1/1:3,4:8:3:31,3,0	./.	./.	0/1:29,0:29:0:0,0,0	0/0:21,0:20:21.05:0,21,225	0/0:19,0:19:11.32:0,11,110	0/1:28,0:26:1.15:1,0,79	0/1:29,0:29:30.58:113,0,31	0/1:23,0:21:5.30:159,0,5	1/1:15,0:13:9.02:98,9,0	0/0:24,0:23:18.04:0,18,190	1/1:19,0:18:20.95:203,21,0	0/0:24,0:21:8.86:0,9,79	0/0:31,0:30:14.86:0,15,143	0/0:37,0:36:39.83:0,40,371	1/1:20,0:17:6.02:72,6,0	1/1:14,0:14:4.57:32,5,0	0/1:19,0:17:30.13:30,0,43	0/1:18,0:17:9.83:98,0,10	0/1:53,0:52:85.23:294,0,85	0/1:27,0:26:2.11:2,0,186	0/1:11,0:11:22:22,0,26	1/1:26,0:24:5.78:50,6,0	1/1:28,0:27:20.76:182,21,0	0/1:31,0:30:88.05:156,0,88	0/1:22,0:21:19.41:90,0,19	0/1:22,0:20:99:134,0,142
chr10	71494980	.	C	CGAGAGAGA	1111.67	PASS	AB=0.960;AC=18;AF=0.333;AN=54;BaseQRankSum=2.805;DP=624;FS=4.787;HRun=0;HaplotypeScore=160.4474;InbreedingCoeff=0.6363;MQ=46.49;MQ0=26;MQRankSum=-4.982;QD=5.10;ReadPosRankSum=-3.014;VQSLOD=1.9584;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:8.12:33,8,0	1/1:9,0:9:5.99:49,6,0	./.	0/0:2,0:2:6.01:0,6,99	0/0:26,0:26:23.71:0,24,582	0/0:23,0:22:16.60:0,17,435	0/0:18,0:18:20.66:0,21,468	0/0:29,0:25:18.03:0,18,331	0/0:37,0:37:57.11:0,57,1337	1/1:16,3:21:12.04:320,12,0	0/1:7,0:7:0:0,0,0	0/0:23,0:22:29.93:0,30,707	1/1:20,0:18:12.51:432,13,0	0/0:26,0:23:24.06:0,24,472	0/0:25,0:25:39.12:0,39,869	0/0:36,0:35:35.77:0,36,825	1/1:14,0:18:6.02:158,6,0	0/1:12,0:12:59.26:71,0,59	0/0:23,0:19:17.70:0,18,172	0/0:15,0:15:15.03:0,15,317	0/0:54,0:53:57.10:0,57,1263	0/0:21,0:20:27.09:0,27,651	1/1:12,0:12:3:25,3,0	0/1:17,1:19:0.28:1,0,0	1/1:27,4:30:5.23:100,5,0	0/1:32,0:31:92.13:92,0,587	0/0:20,0:19:17.98:0,18,413	0/0:24,0:23:14.18:0,14,356
chr10	71495000	.	A	AGAGG	311.27	PASS	AB=0.929;AC=6;AF=0.107;AN=56;BaseQRankSum=4.823;DP=670;FS=15.644;HRun=0;HaplotypeScore=119.2155;InbreedingCoeff=-0.1273;MQ=52.52;MQ0=20;MQRankSum=-2.632;QD=2.66;ReadPosRankSum=1.924;VQSLOD=1.5905;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,20:28:40.29:163,0,40	0/1:9,0:9:30.32:30,0,77	0/0:17,0:12:21.14:0,21,209	0/0:25,0:8:18.45:0,18,245	0/0:25,0:25:39.06:0,39,557	0/0:24,0:24:53.92:0,54,624	0/0:23,0:23:45.02:0,45,530	0/0:26,0:23:61.81:0,62,690	0/0:35,0:35:90.08:0,90,1275	0/1:23,0:21:21.83:22,0,168	0/0:7,0:5:5.90:0,6,41	0/0:28,0:27:56.69:0,57,738	0/1:21,0:19:99:117,0,142	0/0:26,0:24:39.06:0,39,501	0/0:35,0:34:87.10:0,87,1073	0/0:27,0:26:60.06:0,60,832	0/1:22,0:19:54.23:54,0,153	0/1:14,0:14:48.67:49,0,168	0/0:23,0:21:51.37:0,51,387	0/0:23,0:23:44.97:0,45,508	0/0:51,0:51:99:0,100,1306	0/0:18,0:18:45.07:0,45,638	0/0:15,0:15:14.98:0,15,124	0/0:21,0:18:11.55:0,12,90	0/0:35,0:31:19.98:0,20,189	0/0:25,0:25:34.75:0,35,729	0/0:21,0:21:41.97:0,42,487	0/0:23,0:22:54.78:0,55,572
chr10	71496106	.	T	TC	448.89	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=-3.936;DP=501;FS=0.000;HRun=7;HaplotypeScore=53.1721;InbreedingCoeff=0.8587;MQ=74.66;MQ0=0;MQRankSum=-1.673;QD=17.96;ReadPosRankSum=-0.102;VQSLOD=3.0613;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,20:25:45.14:543,45,0	0/0:6,0:6:12.02:0,12,116	0/0:13,0:12:9.04:0,9,166	0/0:15,0:15:30.03:0,30,287	0/0:10,0:10:27.04:0,27,261	0/0:15,0:15:42.06:0,42,400	0/0:15,0:15:42.07:0,42,405	0/0:18,0:18:42.06:0,42,405	0/0:19,0:19:51.08:0,51,492	0/0:14,0:14:33.03:0,33,311	0/0:7,0:7:21.03:0,21,199	0/0:19,0:19:57.08:0,57,545	0/0:18,0:18:48.07:0,48,463	0/0:25,0:25:51.07:0,51,492	0/0:24,0:24:63.08:0,63,603	0/0:22,0:22:66.08:0,66,630	0/0:33,0:33:90.14:0,90,868	0/0:20,0:20:60.07:0,60,572	0/0:12,0:12:21.03:0,21,203	./.	0/0:76,0:76:99:0,201,1924	0/0:4,0:4:9.01:0,9,87	0/0:10,0:10:27.04:0,27,260	0/0:36,0:36:96.11:0,96,919	0/0:11,0:11:30.05:0,30,290	0/0:16,0:16:42.05:0,42,401	0/0:10,0:10:30.05:0,30,289	0/0:8,0:8:21.03:0,21,202
chr10	71497190	.	A	ATCTC	6830.51	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-11.872;DP=641;FS=3.732;HRun=0;HaplotypeScore=106.8974;InbreedingCoeff=0.9919;MQ=80.98;MQ0=0;MQRankSum=-3.725;QD=50.60;ReadPosRankSum=5.700;VQSLOD=5.7140;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,41:50:99:2629,105,0	0/0:7,0:7:12.04:0,12,212	0/0:22,0:22:48.13:0,48,793	0/0:26,0:25:49.04:0,49,636	0/0:32,0:32:93.30:0,93,1586	0/0:17,0:17:42.13:0,42,705	0/0:24,0:24:63.20:0,63,1067	0/0:35,0:35:78.23:0,78,1258	0/0:21,0:21:54.18:0,54,949	0/0:19,0:19:54.18:0,54,914	0/0:24,0:24:63.20:0,63,1086	0/0:13,0:13:33.10:0,33,546	1/1:3,10:14:27.09:654,27,0	0/0:16,0:16:45.14:0,45,766	0/0:22,0:22:60.20:0,60,1050	0/0:22,0:22:57.19:0,57,999	0/0:39,0:39:99:0,111,1849	1/1:3,20:25:56.77:1335,57,0	0/0:17,0:17:39.13:0,39,689	0/0:21,0:21:51.17:0,51,893	0/0:22,0:22:63.20:0,63,1085	0/0:13,0:13:33.09:0,33,554	1/1:6,9:15:23.88:594,24,0	1/1:6,23:31:63.22:1618,63,0	0/0:27,0:27:69.24:0,69,1215	0/0:33,0:33:90.30:0,90,1559	0/0:23,0:23:57.19:0,57,995	0/0:11,0:11:33.11:0,33,583
chr10	71498341	.	C	CT	4325.49	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-9.930;DP=677;FS=2.963;HRun=11;HaplotypeScore=79.4242;InbreedingCoeff=0.8605;MQ=67.45;MQ0=1;MQRankSum=0.414;QD=16.96;ReadPosRankSum=-0.379;VQSLOD=5.5915;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,43:55:82.32:988,82,0	1/1:3,9:12:0.81:187,1,0	0/0:17,0:13:16.18:0,16,99	0/0:14,0:10:13.44:0,13,80	0/0:26,1:27:14.17:0,14,307	0/0:23,2:25:7.76:0,8,419	0/0:24,0:24:55.08:0,55,419	0/0:36,0:40:75.83:0,76,539	0/0:14,0:14:41.83:0,42,323	1/1:5,19:25:26.41:492,26,0	1/1:4,15:19:15.84:342,16,0	0/0:14,0:14:35.81:0,36,272	1/1:5,16:22:9.67:265,10,0	0/0:17,0:17:32.98:0,33,293	0/0:31,1:35:26.91:0,27,550	0/0:25,2:27:31.91:0,32,420	1/1:5,17:25:0.15:358,0,0	1/1:3,21:26:50.73:484,51,0	0/0:22,0:23:46.76:0,47,349	0/0:22,0:22:38.08:0,38,398	0/0:27,2:30:31.28:0,31,400	0/0:17,0:17:38.82:0,39,302	1/1:7,19:27:27.70:448,28,0	1/1:2,17:19:39.08:396,39,0	1/1:6,18:25:1.45:364,1,0	0/0:27,1:28:47.22:0,47,546	0/0:26,0:26:59.31:0,59,438	0/0:19,0:19:49.83:0,50,377
chr10	71499975	.	A	AACC	1386.62	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=5.986;DP=792;FS=0.000;HRun=0;HaplotypeScore=98.0499;InbreedingCoeff=0.9381;MQ=52.93;MQ0=67;MQRankSum=-4.084;QD=38.52;ReadPosRankSum=-0.577;VQSLOD=4.1405;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,28:31:66.23:1481,66,0	0/0:14,0:12:36.07:0,36,574	./.	0/0:27,2:6:8.84:0,9,141	0/0:35,0:34:81.22:0,81,1346	0/0:22,0:21:63.11:0,63,938	0/0:30,0:24:63.22:0,63,1062	0/0:34,0:30:81.08:0,81,1170	0/0:24,0:21:60.10:0,60,957	0/0:26,0:23:66.17:0,66,1069	0/0:29,0:27:72.21:0,72,1148	0/0:33,0:32:75.03:0,75,1215	0/0:22,0:22:51.17:0,51,869	0/0:20,0:15:36.12:0,36,582	0/0:36,0:33:78.16:0,78,1266	0/0:31,0:30:75.15:0,75,1215	0/0:49,0:46:99:0,123,2030	0/0:33,0:31:87.23:0,87,1414	0/0:26,0:21:54.16:0,54,881	0/0:37,0:34:90.27:0,90,1452	0/0:39,0:30:87.30:0,87,1480	0/0:16,0:14:35.91:0,36,585	0/0:23,0:23:60.19:0,60,993	0/0:28,0:25:72.23:0,72,1196	0/0:38,0:35:87.29:0,87,1454	0/0:23,0:17:20.15:0,20,693	0/0:29,0:29:69.22:0,69,1144	0/0:13,0:13:33.11:0,33,563
chr10	71501643	.	AGG	A	2632.78	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.217;DP=667;FS=9.226;HRun=2;HaplotypeScore=112.8279;InbreedingCoeff=0.9881;MQ=75.09;MQ0=0;MQRankSum=-12.209;QD=39.89;ReadPosRankSum=2.907;VQSLOD=3.0653;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,151,2988	1/1:0,4:4:12.04:176,12,0	0/0:12,0:12:35.86:0,36,635	0/0:16,0:16:39.13:0,39,729	0/0:26,0:26:78.25:0,78,1525	0/0:21,0:21:60.21:0,60,1195	0/0:36,0:36:99:0,108,2183	0/0:31,0:31:90.28:0,90,1711	0/0:31,0:31:93.32:0,93,1888	1/1:0,22:22:66.19:961,66,0	1/1:0,9:9:21.07:306,21,0	0/0:24,0:24:72.25:0,72,1463	0/0:19,0:19:57.18:0,57,1120	0/0:34,0:34:99:0,99,2011	0/0:31,0:31:93.31:0,93,1854	0/0:30,0:30:90.30:0,90,1790	1/1:1,15:16:48.16:707,48,0	0/0:27,1:28:37.80:0,38,1600	0/0:20,0:20:60.21:0,60,1196	0/0:19,0:19:57.20:0,57,1156	0/0:57,0:57:99:0,172,3459	0/0:19,0:19:57.20:0,57,1140	0/0:11,0:11:30.10:0,30,609	0/0:27,0:27:81.26:0,81,1605	1/1:0,15:15:45.15:656,45,0	0/0:21,1:22:15.20:0,15,1113	0/0:22,0:22:66.23:0,66,1341	0/0:14,0:13:42.12:0,42,814
chr10	71501647	.	CTGGATGGATGG	C	6633.86	PASS	AB=0.961;AC=12;AF=0.214;AN=56;BaseQRankSum=13.044;DP=675;FS=10.456;HRun=0;HaplotypeScore=227.6965;InbreedingCoeff=0.7823;MQ=72.46;MQ0=0;MQRankSum=-12.690;QD=57.69;ReadPosRankSum=3.475;VQSLOD=3.4764;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,148,8097	1/1:0,4:4:12.04:428,12,0	0/0:10,0:10:15.75:0,16,1022	0/0:14,0:14:36.09:0,36,1509	0/0:24,0:24:69.24:0,69,3954	0/0:21,0:21:60.21:0,60,3343	0/0:40,0:40:99:0,120,6873	0/0:34,0:34:99:0,99,5411	0/0:35,0:35:99:0,105,5497	1/1:0,20:20:60.21:2172,60,0	1/1:0,9:9:24:763,24,0	0/0:25,0:25:75.26:0,75,4155	0/0:19,0:19:57.20:0,57,3211	0/0:34,0:34:99:0,99,5342	0/0:30,0:30:90.31:0,90,5255	0/0:31,0:31:93.31:0,93,4867	1/1:0,15:15:45.15:1611,45,0	0/1:31,1:32:13.05:13,0,5313	0/0:21,0:21:63.22:0,63,3368	0/0:18,0:18:54.19:0,54,2862	0/0:60,0:60:99:0,175,9866	0/0:18,0:18:54.19:0,54,3089	0/0:12,0:12:33.11:0,33,1899	0/0:28,0:28:84.29:0,84,4602	1/1:0,15:15:45.15:1599,45,0	0/1:19,1:20:47.73:48,0,3052	0/0:23,0:23:69.22:0,69,3931	0/0:13,0:12:39.09:0,39,1936
chr10	71502201	.	CTTCCTTCTTTCTTTCTTTCT	C	1761.79	PASS	AB=0.740;AC=10;AF=0.179;AN=56;BaseQRankSum=6.282;DP=589;FS=1.578;HRun=0;HaplotypeScore=260.3890;InbreedingCoeff=0.6919;MQ=60.49;MQ0=3;MQRankSum=-4.265;QD=13.25;ReadPosRankSum=-0.672;VQSLOD=1.9168;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:2,0:24:0.06:0,0,56	0/0:9,0:9:21.04:0,21,1059	0/1:22,0:9:5.70:6,0,75	0/0:24,0:11:8.76:0,9,106	0/0:25,0:25:72.10:0,72,3158	0/0:28,0:28:81.17:0,81,3784	0/0:19,0:19:57.08:0,57,2330	0/0:25,0:25:72.17:0,72,1649	0/0:9,0:9:24.06:0,24,1253	0/0:28,0:28:81.22:0,81,3317	0/0:15,0:15:42.12:0,42,1754	0/0:26,0:26:77.53:0,78,4789	1/1:2,20:22:12.04:668,12,0	0/0:26,0:26:78.21:0,78,4660	0/0:14,0:14:27.01:0,27,1104	0/0:17,0:17:36.09:0,36,1973	0/0:30,0:30:61.99:0,62,2476	1/1:23,0:23:28.31:928,28,0	0/0:23,0:23:60.07:0,60,1425	0/0:12,0:12:36.07:0,36,1447	0/0:18,0:18:48.08:0,48,2265	0/0:18,0:18:53.13:0,53,2587	1/1:0,10:10:1.29:139,1,0	1/1:0,31:31:3.01:159,3,0	0/0:19,0:19:51.12:0,51,1978	0/0:30,0:30:87.21:0,87,4673	0/0:24,0:24:72.12:0,72,3477	0/0:17,0:17:50.98:0,51,1385
chr10	71502205	.	CTTCT	C	2162.89	PASS	AB=0.963;AC=22;AF=0.423;AN=52;BaseQRankSum=7.618;DP=587;FS=3.612;HRun=0;HaplotypeScore=98.7848;InbreedingCoeff=0.6995;MQ=60.63;MQ0=3;MQRankSum=0.008;QD=8.38;ReadPosRankSum=-0.067;VQSLOD=2.5618;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:1.86:95,2,0	1/1:3,4:7:12.04:185,12,0	./.	./.	0/0:25,0:25:7.15:0,7,630	0/1:27,1:28:10.12:10,0,583	0/0:21,0:21:18.05:0,18,350	0/0:27,0:27:11.85:0,12,80	0/0:8,0:8:11.99:0,12,229	1/1:14,14:28:39.10:536,39,0	1/1:6,8:14:24.08:360,24,0	0/0:28,0:28:48.14:0,48,962	1/1:20,0:20:12.01:108,12,0	0/0:27,0:27:45.13:0,45,940	0/0:6,0:14:9.03:0,9,157	0/0:7,0:19:21.06:0,21,340	1/1:13,18:32:12.22:423,12,0	0/0:22,0:23:11.41:0,11,54	1/1:16,5:21:15.05:231,15,0	0/0:6,0:13:21.05:0,21,329	0/0:17,0:17:21.07:0,21,491	0/0:18,0:18:24.08:0,24,509	1/1:10,0:10:1.08:2,1,0	1/1:31,0:31:2.96:19,3,0	1/1:14,5:19:24.08:370,24,0	0/0:29,0:29:39.13:0,39,839	0/1:23,1:24:13.11:13,0,646	0/0:18,0:18:9:0,9,99
chr10	71502214	.	T	TC	183.63	PASS	AB=0.889;AC=6;AF=0.107;AN=56;BaseQRankSum=5.376;DP=566;FS=0.000;HRun=0;HaplotypeScore=73.5363;InbreedingCoeff=0.4236;MQ=56.74;MQ0=5;MQRankSum=-4.302;QD=2.24;ReadPosRankSum=-1.253;VQSLOD=2.2126;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:15.84:0,16,90	0/0:6,0:6:17.72:0,18,151	0/0:13,0:3:9.03:0,9,122	0/0:16,0:6:8.04:0,8,124	0/0:25,0:25:75.24:0,75,1021	0/0:27,0:27:81.16:0,81,1062	0/0:21,0:21:62.80:0,63,847	0/0:27,0:25:72.24:0,72,996	0/0:9,0:9:27.09:0,27,377	0/0:25,0:25:71.43:0,71,726	0/0:14,0:14:41.53:0,42,393	0/0:30,0:30:90.29:0,90,1237	0/1:20,0:20:11.48:19,0,11	0/0:27,0:27:81.27:0,81,1127	0/0:14,0:14:27.05:0,27,314	0/0:18,0:18:33.03:0,33,361	0/0:30,0:30:47.06:0,47,506	0/1:15,6:21:99:198,0,523	0/0:22,0:20:59.74:0,60,676	0/0:11,0:11:33.03:0,33,392	0/0:19,0:19:51.17:0,51,713	0/0:16,0:16:48.15:0,48,653	1/1:10,0:10:2.24:41,2,0	1/1:31,0:31:3.01:39,3,0	0/0:19,0:19:47.48:0,47,470	0/0:30,0:30:90.26:0,90,1195	0/0:25,0:25:72.15:0,72,974	0/0:17,0:17:45.12:0,45,593
chr10	71502220	.	CTTT	C	175.46	PASS	AB=0.967;AC=10;AF=0.179;AN=56;BaseQRankSum=10.281;DP=556;FS=4.040;HRun=3;HaplotypeScore=89.8635;InbreedingCoeff=0.1573;MQ=56.84;MQ0=6;MQRankSum=0.691;QD=1.02;ReadPosRankSum=7.037;VQSLOD=-0.4343;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:14.51:15,0,68	0/1:6,0:6:14.26:14,0,63	0/0:10,0:1:2.92:0,3,17	0/0:10,0:5:1.64:0,2,65	0/0:22,0:22:65.97:0,66,1139	0/0:29,0:29:79.19:0,79,1435	0/0:20,0:20:60.11:0,60,994	0/0:26,0:24:72.24:0,72,1031	0/0:11,0:11:33.11:0,33,551	0/1:25,0:25:3.23:3,0,430	0/1:15,0:15:13.50:14,0,237	0/0:29,0:29:87.28:0,87,1657	1/1:20,0:20:11.70:68,12,0	0/0:25,0:25:75.25:0,75,1499	0/0:15,0:15:30.10:0,30,441	0/0:18,0:18:36.12:0,36,591	0/1:29,0:29:42.53:43,0,301	0/0:23,0:22:63.07:0,63,737	0/0:21,0:17:10.89:0,11,420	0/0:11,0:11:33.11:0,33,646	0/0:19,0:19:57.16:0,57,978	0/0:17,0:17:51.15:0,51,913	0/0:10,0:10:3.59:0,4,10	1/1:31,0:31:2.50:9,2,0	0/1:15,5:20:99:147,0,227	0/0:30,0:30:90.29:0,90,1610	0/0:23,0:23:61.12:0,61,1170	0/0:15,0:15:42.09:0,42,597
chr10	71505147	.	AGTGT	A	349.66	PASS	AB=0.887;AC=6;AF=0.125;AN=48;BaseQRankSum=3.057;DP=465;FS=0.000;HRun=0;HaplotypeScore=72.7976;InbreedingCoeff=0.3147;MQ=68.41;MQ0=9;MQRankSum=0.414;QD=3.89;ReadPosRankSum=2.104;VQSLOD=1.2686;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:24:18.06:0,18,403	0/0:5,0:5:6.01:0,6,95	./.	./.	0/0:6,0:6:3.01:0,3,70	0/0:12,0:15:8.77:0,9,145	0/0:26,0:26:21.75:0,22,382	0/0:28,0:28:3.48:0,3,59	0/0:20,0:21:20.78:0,21,331	0/0:10,0:10:4.26:0,4,65	0/0:6,0:6:3.01:0,3,70	0/0:23,0:23:23.94:0,24,379	0/0:14,0:14:3.01:0,3,53	0/0:11,0:11:12.50:0,12,214	0/0:19,0:19:21.07:0,21,484	0/0:12,0:11:6:0,6,93	0/1:28,0:29:0.88:1,0,459	0/1:19,6:25:17.58:145,0,18	0/0:10,0:12:5.34:0,5,22	./.	0/0:27,1:28:8.66:0,9,101	0/0:6,0:6:9.03:0,9,208	1/1:10,0:10:6.02:81,6,0	1/1:20,6:26:16.77:235,17,0	0/0:12,0:12:9.03:0,9,211	0/0:13,0:13:1.82:0,2,5	0/0:10,0:13:8.47:0,8,46	./.
chr10	71513226	.	TTG	T	90.84	PASS	AB=0.938;AC=12;AF=0.231;AN=52;BaseQRankSum=4.323;DP=684;FS=0.942;HRun=0;HaplotypeScore=92.8059;InbreedingCoeff=0.3032;MQ=69.33;MQ0=11;MQRankSum=-0.705;QD=0.43;ReadPosRankSum=0.633;VQSLOD=1.2986;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,1:30:17.49:17,0,108	./.	0/0:39,0:24:0.47:0,0,1	./.	0/0:17,0:17:6.02:0,6,86	0/0:16,0:16:18.06:0,18,257	0/0:32,0:32:20.85:0,21,302	0/0:27,0:26:6.90:0,7,75	0/0:18,0:19:3.91:0,4,197	0/0:25,0:25:26.51:0,27,267	0/0:14,0:16:3:0,3,26	0/1:24,4:28:17.48:17,0,162	1/1:14,0:16:8.66:50,9,0	0/0:22,1:23:5.46:0,5,256	0/0:28,0:28:21.07:0,21,312	0/0:21,0:21:24.07:0,24,334	0/0:15,0:22:17.96:0,18,150	1/1:17,0:20:11.36:56,11,0	0/1:25,0:26:2.22:2,0,93	0/1:17,0:17:14.24:14,0,170	0/0:57,0:56:7.23:0,7,321	0/0:16,0:16:21.07:0,21,305	1/1:14,0:19:11.83:57,12,0	0/1:35,0:36:0:0,0,0	0/0:26,0:25:12.01:0,12,132	0/0:26,0:24:9.92:0,10,132	0/1:14,3:17:20.47:20,0,112	0/0:15,0:14:15.02:0,15,183
chr10	71513432	.	TTC	T	7285.75	PASS	AB=0.929;AC=25;AF=0.446;AN=56;BaseQRankSum=16.752;DP=799;FS=0.309;HRun=0;HaplotypeScore=117.7930;InbreedingCoeff=0.6373;MQ=70.06;MQ0=1;MQRankSum=-0.594;QD=17.31;ReadPosRankSum=6.105;VQSLOD=4.9025;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,49:59:99:1600,129,0	1/1:1,8:9:21.07:260,21,0	0/0:44,0:41:79.20:0,79,1219	0/0:40,0:27:50.91:0,51,698	0/1:25,3:27:36.32:36,0,991	0/0:20,0:20:45.15:0,45,732	0/0:27,0:27:35.46:0,35,1075	0/1:33,3:36:38.60:39,0,927	0/0:31,2:33:12.89:0,13,1246	1/1:9,17:26:54.17:669,54,0	1/1:2,13:15:30.09:372,30,0	0/0:23,1:24:25.99:0,26,897	1/1:9,21:30:48.15:595,48,0	0/1:20,3:23:11.21:11,0,820	0/0:24,1:25:26.02:0,26,941	0/0:21,0:21:60.20:0,60,984	1/1:5,26:31:63.20:781,63,0	1/1:3,16:19:42.13:517,42,0	0/0:18,0:18:42.13:0,42,656	0/0:18,0:18:48.15:0,48,761	0/0:53,4:57:16.99:0,17,1719	0/0:28,0:28:60.19:0,60,960	1/1:5,26:31:63.20:781,63,0	1/1:9,38:47:93.29:1153,93,0	1/1:3,13:16:36.11:446,36,0	0/1:40,3:43:9.25:9,0,1327	0/0:21,1:22:7.96:0,8,640	0/1:8,0:8:16.15:16,0,249
chr10	71513555	.	GTAGT	G	5167.80	PASS	AB=0.550;AC=17;AF=0.304;AN=56;BaseQRankSum=12.030;DP=794;FS=13.551;HRun=0;HaplotypeScore=142.4524;InbreedingCoeff=0.8844;MQ=60.11;MQ0=8;MQRankSum=1.829;QD=22.87;ReadPosRankSum=3.383;VQSLOD=4.1468;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:87.29:0,87,1520	0/1:2,9:11:7.69:142,0,8	0/0:19,0:13:36.08:0,36,661	0/0:25,0:17:13.56:0,14,608	0/0:30,0:30:87.30:0,87,1688	0/0:30,0:30:75.26:0,75,1521	0/0:30,0:30:75.21:0,75,1345	0/0:46,0:43:99:0,105,1898	0/0:42,0:42:99:0,114,2196	1/1:9,22:31:50.30:965,50,0	1/1:6,10:16:3.01:52,3,0	0/0:27,0:27:66.22:0,66,1222	1/1:3,30:33:24:412,24,0	0/0:38,0:38:99:0,105,2087	0/0:39,0:39:96.27:0,96,1886	0/0:27,0:26:58.71:0,59,1111	1/1:26,7:33:72.24:1130,72,0	1/1:17,0:17:29.18:412,29,0	0/0:24,0:24:48.14:0,48,883	0/0:34,0:34:78.25:0,78,1510	0/0:26,0:26:54.18:0,54,1058	0/0:31,0:31:84.27:0,84,1530	1/1:7,21:27:11.43:189,11,0	1/1:29,3:32:72.06:1112,72,0	1/1:18,7:25:47.95:754,48,0	0/0:27,0:27:66.23:0,66,1452	0/0:32,0:32:75.26:0,75,1344	0/0:5,0:5:12.04:0,12,248
chr10	71513989	.	CA	C	586.38	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.047;DP=702;FS=10.493;HRun=11;HaplotypeScore=79.8728;InbreedingCoeff=0.8455;MQ=72.35;MQ0=1;MQRankSum=-2.018;QD=14.66;ReadPosRankSum=1.312;VQSLOD=3.3393;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,37:40:57.18:681,57,0	0/0:16,0:16:36.08:0,36,378	0/0:19,0:17:12.34:0,12,262	0/0:20,0:19:23.72:0,24,183	0/0:29,1:31:44.35:0,44,655	0/0:20,0:21:56.98:0,57,590	0/0:26,0:26:69.17:0,69,736	0/0:32,0:36:78.97:0,79,749	0/0:29,0:29:81.16:0,81,846	0/0:25,0:25:57.14:0,57,605	0/0:15,0:18:27.97:0,28,426	0/0:26,0:26:54.13:0,54,570	0/0:26,1:27:47.52:0,48,693	0/0:23,0:23:66.13:0,66,685	0/0:31,0:31:87.22:0,87,928	0/0:24,0:26:68.83:0,69,694	0/0:34,0:34:89.35:0,89,986	0/0:33,0:33:84.64:0,85,884	0/0:18,0:20:50.71:0,51,474	0/0:17,0:17:42.11:0,42,448	0/0:29,0:32:80.70:0,81,809	0/0:22,0:22:51.12:0,51,537	0/0:20,2:22:4.85:0,5,456	0/0:29,0:31:81.07:0,81,846	0/0:16,1:17:20.44:0,20,408	0/0:26,0:26:72.18:0,72,767	0/0:27,0:27:63.10:0,63,652	0/0:6,0:6:15.03:0,15,153
chr10	71514432	.	TAC	T	281.79	PASS	AB=0.909;AC=10;AF=0.192;AN=52;BaseQRankSum=3.169;DP=617;FS=9.860;HRun=0;HaplotypeScore=98.8194;InbreedingCoeff=-0.1068;MQ=56.73;MQ0=16;MQRankSum=2.108;QD=1.39;ReadPosRankSum=1.496;VQSLOD=1.1592;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:34:8.52:42,9,0	0/0:10,0:10:8.11:0,8,44	./.	./.	0/1:13,2:14:45.13:45,0,144	0/1:13,3:15:80.49:80,0,96	0/1:22,5:28:99:118,0,131	0/1:24,0:20:15.95:16,0,54	0/1:19,1:21:28.99:29,0,98	0/0:29,0:29:26.58:0,27,243	0/0:11,0:11:2.89:0,3,25	0/0:24,0:24:30.07:0,30,402	0/0:19,0:22:11.99:0,12,111	0/1:23,1:24:43.79:44,0,182	0/0:16,0:16:18.03:0,18,226	0/1:20,1:21:8.30:8,0,273	0/0:19,0:20:16.47:0,16,119	0/0:12,0:20:9:0,9,78	0/0:13,0:13:3:0,3,26	0/0:19,0:19:14.94:0,15,164	0/0:45,2:47:0.26:0,0,391	0/0:20,0:21:18.05:0,18,246	0/0:9,0:13:4.80:0,5,30	0/0:29,0:39:11.47:0,11,102	0/0:12,0:20:5.74:0,6,52	0/0:23,0:23:15.05:0,15,215	0/1:16,2:18:35.61:36,0,285	0/0:8,0:8:9.02:0,9,115
chr10	71514958	.	GA	G	669.50	PASS	AB=0.870;AC=3;AF=0.054;AN=56;BaseQRankSum=7.169;DP=714;FS=2.965;HRun=10;HaplotypeScore=70.3696;InbreedingCoeff=0.5579;MQ=76.97;MQ0=0;MQRankSum=0.085;QD=13.39;ReadPosRankSum=-0.408;VQSLOD=3.6587;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,156,1694	0/0:11,1:12:4.02:0,4,273	0/1:17,3:20:72.28:72,0,134	0/0:17,0:16:10.22:0,10,122	0/0:29,0:30:72.01:0,72,762	0/0:10,0:13:32.91:0,33,339	0/0:27,0:28:74.99:0,75,784	0/0:39,0:40:95.95:0,96,1017	0/0:14,1:15:13.04:0,13,365	0/0:28,0:31:77.71:0,78,805	0/0:19,0:19:54.15:0,54,597	0/0:21,0:22:64.70:0,65,678	0/0:24,0:24:66.14:0,66,717	0/0:21,0:21:57.10:0,57,610	0/0:22,1:23:31.10:0,31,571	0/0:29,0:29:75.20:0,75,830	0/0:29,1:30:46.12:0,46,722	0/0:18,0:18:48.07:0,48,507	0/0:21,1:23:36.93:0,37,604	1/1:3,27:30:80.98:703,81,0	0/0:26,0:26:66.17:0,66,718	0/0:19,0:20:44.95:0,45,479	0/0:30,0:30:81.16:0,81,856	0/0:27,0:29:78.04:0,78,844	0/0:25,0:28:77.72:0,78,791	0/0:31,0:32:54.98:0,55,796	0/0:26,0:26:54.15:0,54,597	0/0:18,0:18:54.15:0,54,597
chr10	71516091	.	TACACACACACACACAC	T	975.56	PASS	AB=0.819;AC=8;AF=0.148;AN=54;BaseQRankSum=2.923;DP=623;FS=2.852;HRun=0;HaplotypeScore=227.6556;InbreedingCoeff=0.5594;MQ=69.23;MQ0=16;MQRankSum=0.623;QD=9.66;ReadPosRankSum=3.326;VQSLOD=2.7257;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:45:1.20:0,1,156	0/1:6,5:10:21.40:121,0,21	./.	0/0:36,0:21:3.01:0,3,40	0/0:24,0:24:39.53:0,40,1665	0/0:17,0:17:30.24:0,30,1298	0/0:25,0:25:42.07:0,42,2090	0/0:33,0:33:25.75:0,26,239	0/0:20,0:22:42.06:0,42,1888	1/1:23,10:32:2:248,2,0	1/1:8,7:14:5.14:267,5,0	0/0:20,0:21:35.80:0,36,2003	0/0:16,0:16:15.02:0,15,881	0/0:18,0:15:24.05:0,24,1306	0/0:14,0:14:18.53:0,19,938	0/0:21,0:20:24.06:0,24,1198	1/1:23,0:21:14.33:160,14,0	0/0:12,0:14:24.05:0,24,904	0/0:22,0:21:35.14:0,35,961	0/0:15,0:16:33.08:0,33,1503	0/0:35,0:33:50.54:0,51,2356	0/0:13,0:12:14.63:0,15,656	0/0:10,0:10:9:0,9,445	0/0:30,0:29:21.07:0,21,1491	0/1:18,1:19:1.33:312,0,1	0/0:26,0:26:63.08:0,63,3072	0/0:22,0:21:30.56:0,31,1664	0/0:6,0:6:14.08:0,14,877
chr10	71516093	.	C	CAT	482.84	PASS	AB=0.719;AC=7;AF=0.125;AN=56;BaseQRankSum=3.030;DP=626;FS=10.509;HRun=0;HaplotypeScore=93.2965;InbreedingCoeff=0.4796;MQ=67.26;MQ0=20;MQRankSum=-0.675;QD=5.31;ReadPosRankSum=-2.557;VQSLOD=1.5053;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:52.11:0,52,406	0/0:11,0:10:20.85:0,21,156	0/0:34,0:23:53.05:0,53,498	0/0:35,0:20:50.11:0,50,500	0/0:26,0:26:56.68:0,57,508	0/0:18,0:17:29.07:0,29,296	0/0:25,0:25:63.03:0,63,698	0/0:32,0:32:78.86:0,79,633	0/1:22,0:22:4.67:5,0,309	0/0:30,0:30:69.32:0,69,582	0/0:15,0:14:26.86:0,27,208	0/0:21,0:21:44.94:0,45,513	0/1:3,12:15:6.06:103,0,6	0/0:20,0:16:41.98:0,42,425	0/0:15,0:15:19.53:0,20,245	0/0:22,0:21:44.89:0,45,422	0/0:22,0:20:53.86:0,54,433	1/1:12,1:13:34.35:280,34,0	0/0:21,0:20:49.57:0,50,400	0/0:16,0:16:36:0,36,378	0/0:38,0:34:58.02:0,58,574	0/0:16,0:15:23.92:0,24,193	0/1:4,7:12:9.17:9,0,31	1/1:5,24:28:0.66:211,1,0	0/0:17,0:17:42.56:0,43,358	0/0:26,0:26:64.34:0,64,727	0/0:22,0:21:46.28:0,46,460	0/0:6,0:6:14.08:0,14,157
chr10	71517223	.	ATTC	A	1171.59	PASS	AB=0.533;AC=7;AF=0.125;AN=56;BaseQRankSum=6.093;DP=447;FS=2.657;HRun=0;HaplotypeScore=62.6954;InbreedingCoeff=0.7916;MQ=59.80;MQ0=11;MQRankSum=0.518;QD=26.63;ReadPosRankSum=3.506;VQSLOD=3.1656;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:59.36:0,59,218	0/0:8,0:8:23.99:0,24,389	0/0:12,0:10:17.24:0,17,361	0/0:7,0:4:8.60:0,9,67	0/0:28,0:27:75.22:0,75,1451	0/0:20,0:19:42.14:0,42,846	0/0:20,0:20:48.11:0,48,932	0/0:33,0:29:78.18:0,78,1321	0/0:15,0:15:42.13:0,42,771	0/0:16,0:15:42.13:0,42,861	0/0:17,0:16:39.12:0,39,796	0/0:11,0:11:27.04:0,27,533	1/1:0,5:6:15.05:235,15,0	0/0:16,0:15:39.11:0,39,749	0/0:12,0:12:33.08:0,33,617	0/0:10,0:10:30.05:0,30,585	0/0:15,0:14:21.07:0,21,419	1/1:3,16:19:32.94:505,33,0	0/0:30,0:30:81.22:0,81,1474	0/0:30,0:29:69.11:0,69,1211	0/0:11,0:11:30.08:0,30,551	0/0:3,0:3:9.03:0,9,193	1/1:1,9:10:20.96:356,21,0	0/1:1,7:8:21.83:222,0,22	0/0:18,0:18:45.14:0,45,850	0/0:15,0:14:38.69:0,39,740	0/0:20,0:20:60.13:0,60,1160	0/0:7,0:7:18.06:0,18,385
chr10	71517226	.	CTT	C	890.30	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=9.690;DP=441;FS=3.714;HRun=10;HaplotypeScore=55.8491;InbreedingCoeff=0.8058;MQ=57.94;MQ0=13;MQRankSum=-1.062;QD=11.71;ReadPosRankSum=3.292;VQSLOD=0.8836;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:72.18:800,72,0	0/0:7,0:7:15.05:0,15,238	0/0:10,0:8:15.05:0,15,209	0/0:7,0:4:0:0,0,0	0/0:27,0:27:73.08:0,73,1084	0/0:20,0:19:42.10:0,42,639	0/0:19,0:20:47.61:0,48,687	0/0:33,0:29:66.17:0,66,968	0/0:15,0:15:36.11:0,36,547	0/0:15,0:14:39.13:0,39,619	0/0:16,0:15:36.12:0,36,571	0/0:12,0:11:24.08:0,24,381	1/1:7,0:6:12.83:50,13,0	0/0:15,0:14:36.08:0,36,537	0/0:11,0:11:27.09:0,27,422	0/0:11,0:11:30.10:0,30,469	0/0:17,0:16:24.08:0,24,366	1/1:19,0:18:28.04:113,28,0	0/0:27,0:27:69.18:0,69,1005	0/0:28,0:27:51.17:0,51,802	0/0:11,0:11:24.07:0,24,359	0/0:3,0:3:9.03:0,9,143	1/1:10,0:10:17.24:65,17,0	0/1:9,0:9:22.31:22,0,38	0/0:17,0:17:42.14:0,42,667	0/0:15,0:14:36.08:0,36,544	0/0:21,0:21:54.18:0,54,840	0/0:6,0:6:18.06:0,18,286
chr10	71519767	.	GGT	G	2017.67	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.612;DP=691;FS=4.375;HRun=0;HaplotypeScore=79.6300;InbreedingCoeff=0.9862;MQ=84.89;MQ0=1;MQRankSum=-4.058;QD=40.35;ReadPosRankSum=2.689;VQSLOD=5.3556;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,49:49:99:2113,138,0	0/0:16,0:16:45.15:0,45,840	0/0:24,0:24:69.24:0,69,1292	0/0:18,0:18:15.74:0,16,800	0/0:21,0:21:57.18:0,57,1022	0/0:24,0:24:72.25:0,72,1373	0/0:22,0:22:66.23:0,66,1248	0/0:29,0:29:75.24:0,75,1349	0/0:24,0:24:69.22:0,69,1279	0/0:25,0:25:69.24:0,69,1289	0/0:21,0:21:57.20:0,57,1063	0/0:24,0:24:69.24:0,69,1320	0/0:28,0:28:84.28:0,84,1565	0/0:24,0:24:66.21:0,66,1202	0/0:26,0:26:78.27:0,78,1481	0/0:21,0:21:57.15:0,57,1051	0/0:26,0:26:78.27:0,78,1494	0/0:18,0:18:51.17:0,51,983	0/0:23,0:22:69.22:0,69,1262	0/0:18,0:18:48.16:0,48,903	0/0:54,0:54:99:0,159,2901	0/0:24,0:24:66.22:0,66,1220	0/0:24,0:24:66.23:0,66,1223	0/0:33,0:33:96.33:0,96,1828	0/0:16,0:16:48.16:0,48,920	0/0:28,0:28:75.26:0,75,1439	0/0:20,0:20:54.19:0,54,1041	0/0:10,0:10:30.10:0,30,552
chr10	71520516	.	TCC	T	283.52	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.612;DP=720;FS=0.000;HRun=2;HaplotypeScore=102.4663;InbreedingCoeff=0.6618;MQ=48.23;MQ0=62;MQRankSum=-1.655;QD=10.13;ReadPosRankSum=2.251;VQSLOD=0.6277;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,18:26:9.52:367,10,0	0/0:6,0:6:18.05:0,18,293	0/0:50,0:11:27.09:0,27,534	0/0:57,0:12:0.01:0,0,278	0/0:22,0:20:51.64:0,52,913	0/0:21,0:18:45.15:0,45,848	0/0:22,0:16:48.02:0,48,872	0/0:29,0:17:44:0,44,835	0/0:22,0:20:60.12:0,60,1169	0/0:27,0:22:66.05:0,66,1085	0/0:11,0:10:18.06:0,18,312	0/0:25,0:21:63.21:0,63,1067	0/0:18,0:16:16.02:0,16,161	0/0:22,0:22:57.05:0,57,1028	0/0:34,0:34:99:0,100,1784	0/0:26,0:25:69.18:0,69,1286	0/0:20,0:18:48.16:0,48,846	0/0:24,0:17:43.23:0,43,280	0/0:17,0:12:36.12:0,36,620	0/0:27,0:24:69.24:0,69,1353	0/0:43,0:41:99:0,101,1742	0/0:23,0:21:57.19:0,57,1089	0/0:19,0:18:32.95:0,33,479	0/0:27,0:23:48.73:0,49,419	0/0:16,0:16:6.09:0,6,721	0/0:33,0:31:93.31:0,93,1712	0/0:24,0:22:60.12:0,60,1115	0/0:26,0:26:72.24:0,72,1330
chr10	71520520	.	CTT	C	919.64	PASS	AB=0.803;AC=6;AF=0.107;AN=56;BaseQRankSum=8.771;DP=710;FS=10.889;HRun=2;HaplotypeScore=98.2829;InbreedingCoeff=0.2031;MQ=47.22;MQ0=63;MQRankSum=-1.206;QD=6.76;ReadPosRankSum=2.434;VQSLOD=-0.5612;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:50.69:0,51,280	0/0:5,0:5:12.04:0,12,49	0/0:39,1:10:27.02:0,27,427	0/1:48,0:10:16.45:16,0,215	0/0:25,0:23:57.65:0,58,1096	0/0:22,0:18:48.16:0,48,955	0/0:21,0:15:45.07:0,45,858	0/0:33,0:17:45.60:0,46,791	0/0:25,0:22:60.20:0,60,1171	0/0:26,1:22:2.73:0,3,233	0/0:10,0:9:13.87:0,14,83	0/0:27,0:23:69.19:0,69,1261	0/1:8,8:14:35.13:185,0,35	0/0:22,0:21:54.18:0,54,1049	0/0:33,0:33:99:0,99,1917	0/0:24,0:23:66.18:0,66,1247	0/0:19,0:17:41.70:0,42,270	1/1:10,13:16:40.21:439,40,0	0/0:19,0:12:36.12:0,36,705	0/0:27,0:24:72.18:0,72,1399	0/0:44,0:42:77.39:0,77,1790	0/0:23,0:21:57.20:0,57,1143	0/1:16,5:18:96.16:96,0,285	0/1:18,10:24:99:313,0,174	0/0:16,0:16:4.19:0,4,94	0/0:33,0:31:93.30:0,93,1768	0/0:23,0:20:54.19:0,54,1078	0/0:27,0:26:72.25:0,72,1423
chr10	71520554	.	CTCT	C	206.28	PASS	AB=0.965;AC=14;AF=0.304;AN=46;BaseQRankSum=3.280;DP=668;FS=10.259;HRun=0;HaplotypeScore=110.3378;InbreedingCoeff=0.3423;MQ=44.92;MQ0=73;MQRankSum=-3.290;QD=0.87;ReadPosRankSum=-0.043;VQSLOD=1.5188;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:12.65:0,13,75	./.	./.	./.	0/0:30,0:29:34.05:0,34,529	0/0:27,0:22:15.97:0,16,323	0/0:25,0:13:3.01:0,3,36	./.	1/1:17,10:22:2.03:37,2,0	1/1:32,0:21:2.98:21,3,0	0/0:14,0:9:0:0,0,0	0/1:25,0:22:14.22:14,0,286	0/0:18,0:14:12.04:0,12,170	./.	0/0:29,0:29:21.67:0,22,558	0/0:27,0:24:7.54:0,8,64	1/1:16,0:13:3.01:38,3,0	0/0:21,1:15:0:0,0,0	1/1:16,3:13:3.01:38,3,0	0/1:20,3:19:0.03:0,0,0	0/1:38,0:35:23.06:23,0,210	0/0:23,1:21:15.05:0,15,254	0/0:23,4:22:0:0,0,0	0/0:29,0:23:13.20:0,13,197	0/0:13,0:13:3:0,3,25	0/0:41,0:37:42.14:0,42,705	1/1:19,10:23:5.84:73,6,0	0/1:26,0:25:90.54:91,0,151
chr10	71520667	.	CTG	C	118.63	PASS	AB=0.936;AC=12;AF=0.231;AN=52;BaseQRankSum=6.909;DP=465;FS=13.714;HRun=0;HaplotypeScore=72.4031;InbreedingCoeff=0.5534;MQ=43.30;MQ0=42;MQRankSum=-3.364;QD=1.26;ReadPosRankSum=-3.981;VQSLOD=-0.6729;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:9:0:0,0,0	0/1:3,0:3:0.02:0,0,0	./.	./.	0/0:22,0:22:17.99:0,18,302	0/0:16,0:14:29.91:0,30,503	0/0:19,0:14:15.49:0,15,194	0/0:41,0:23:66.06:0,66,1064	0/0:22,0:18:35.69:0,36,652	0/1:9,1:10:4.89:83,0,5	0/1:7,1:6:0:0,0,0	0/0:16,0:15:31.84:0,32,597	0/1:16,1:12:3.24:3,0,37	0/0:17,0:15:35.99:0,36,613	0/0:35,0:35:85.99:0,86,1493	0/0:29,0:27:72.23:0,72,1332	1/1:9,2:6:11.88:102,12,0	0/1:6,1:4:3.60:4,0,13	0/0:15,0:14:37.01:0,37,683	0/0:23,0:23:35.60:0,36,661	0/0:25,0:21:33.92:0,34,593	0/0:22,0:21:36.04:0,36,611	1/1:18,0:13:5.45:28,5,0	1/1:8,0:8:2.99:23,3,0	0/0:7,0:7:0.47:0,0,1	0/0:32,0:26:54.15:0,54,1211	0/0:18,0:17:18.13:0,18,683	0/0:12,0:7:14.88:0,15,200
chr10	71520673	.	CTCTG	C	201.78	PASS	AB=1.000;AC=10;AF=0.200;AN=50;BaseQRankSum=6.372;DP=490;FS=7.782;HRun=0;HaplotypeScore=90.9326;InbreedingCoeff=0.6761;MQ=43.85;MQ0=41;MQRankSum=-4.558;QD=2.55;ReadPosRankSum=-3.048;VQSLOD=0.3405;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:11:0:0,0,0	0/0:2,0:2:0:0,0,0	./.	./.	0/0:24,0:24:15.03:0,15,282	0/0:17,0:15:32.93:0,33,650	0/0:20,0:15:15.48:0,15,241	0/0:42,0:25:61.22:0,61,1028	0/0:22,0:18:35.58:0,36,841	1/1:10,0:10:16.18:93,16,0	./.	0/0:17,0:15:36.11:0,36,806	1/1:12,6:13:1.18:28,1,0	0/0:16,0:14:33.04:0,33,591	0/0:37,0:37:89.18:0,89,1851	0/0:31,0:29:78.24:0,78,1743	0/1:10,0:7:7.37:105,0,7	1/1:8,0:6:12.33:80,12,0	0/0:15,0:15:38.70:0,39,808	0/0:24,0:24:44.93:0,45,865	0/0:26,0:21:33.07:0,33,669	0/0:20,0:19:36.11:0,36,796	1/1:10,7:13:5.16:29,5,0	0/0:7,2:9:0.36:0,0,1	0/0:7,0:7:0:0,0,0	0/0:34,0:28:64.04:0,64,1627	0/0:24,0:23:63.01:0,63,1202	0/0:13,0:9:17.04:0,17,263
chr10	71520675	.	CTG	C	441.90	PASS	AB=0.974;AC=15;AF=0.288;AN=52;BaseQRankSum=7.537;DP=491;FS=13.987;HRun=0;HaplotypeScore=78.1116;InbreedingCoeff=0.6915;MQ=44.18;MQ0=39;MQRankSum=-4.276;QD=3.95;ReadPosRankSum=-4.166;VQSLOD=-0.4019;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:10:0:0,0,0	0/0:2,0:2:0:0,0,0	./.	./.	0/0:24,0:24:13.21:0,13,201	0/0:16,0:14:32.45:0,32,495	0/0:19,0:14:15.48:0,15,198	0/0:40,0:25:49.01:0,49,942	0/0:23,0:19:38.13:0,38,666	1/1:10,1:11:26.57:217,27,0	1/1:10,1:9:3:25,3,0	0/0:18,0:16:38.96:0,39,638	0/1:19,0:14:26.20:26,0,35	0/0:16,0:14:33.04:0,33,495	0/0:38,0:38:87.84:0,88,1473	0/0:31,0:29:78.14:0,78,1285	1/1:10,0:7:17.43:124,17,0	1/1:8,0:6:14.79:96,15,0	0/0:16,0:16:45.02:0,45,683	0/0:26,0:26:36.22:0,36,704	0/0:24,0:19:33.04:0,33,512	0/0:20,0:19:36.11:0,36,619	1/1:17,1:13:5.98:63,6,0	1/1:10,0:10:5.99:51,6,0	0/0:1,6:7:0.47:0,0,1	0/0:35,0:29:68.09:0,68,1272	0/0:24,0:23:42.41:0,42,878	0/1:11,1:8:0.58:1,0,181
chr10	71520683	.	CTG	C	576.59	PASS	AB=0.847;AC=20;AF=0.370;AN=54;BaseQRankSum=8.403;DP=510;FS=21.414;HRun=0;HaplotypeScore=77.5270;InbreedingCoeff=0.6330;MQ=44.14;MQ0=36;MQRankSum=-0.905;QD=3.84;ReadPosRankSum=-1.711;VQSLOD=-0.0004;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:14:3:25,3,0	1/1:4,0:4:2.85:23,3,0	./.	0/0:6,0:1:0:0,0,0	0/1:14,11:25:33.62:34,0,70	0/0:16,0:14:5.63:0,6,225	0/0:19,0:14:10.89:0,11,138	0/0:35,0:21:36.34:0,36,348	0/0:24,0:20:38.98:0,39,509	1/1:11,0:11:23.82:203,24,0	1/1:11,0:9:3:25,3,0	0/0:19,0:17:18.95:0,19,439	1/1:20,0:15:12.56:79,13,0	0/0:14,0:12:26.93:0,27,273	0/0:36,1:37:82.57:0,83,1022	0/0:31,0:29:1.62:0,2,633	1/1:13,1:11:23.28:146,23,0	1/1:7,0:5:11.85:81,12,0	0/0:15,0:15:33.59:0,34,283	0/0:27,0:27:40.66:0,41,693	0/0:23,0:18:18.08:0,18,342	0/0:23,0:22:11.36:0,11,254	1/1:19,0:14:5.75:55,6,0	1/1:10,0:10:10.54:79,11,0	0/0:7,0:7:0.47:0,0,1	0/0:35,0:29:35.11:0,35,703	0/0:25,0:24:37.13:0,37,693	0/1:12,0:8:7.32:7,0,131
chr10	71520685	.	GTC	G	304.71	PASS	AB=0.949;AC=15;AF=0.278;AN=54;BaseQRankSum=0.965;DP=516;FS=1.709;HRun=0;HaplotypeScore=79.0187;InbreedingCoeff=-0.1546;MQ=45.20;MQ0=34;MQRankSum=2.324;QD=1.08;ReadPosRankSum=0.031;VQSLOD=1.3557;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:16:0:0,0,0	0/0:4,0:4:3.47:0,3,26	./.	0/0:10,0:3:0:0,0,0	0/1:24,0:25:15.66:16,0,20	0/1:15,1:14:48.49:48,0,146	0/1:19,1:14:10.72:11,0,82	0/0:33,0:20:7.27:0,7,93	0/0:23,1:20:21.05:0,21,314	0/1:10,0:10:15:15,0,40	0/0:10,0:9:0:0,0,0	0/0:19,0:17:8.50:0,9,238	0/0:21,0:16:14.07:0,14,85	0/0:13,0:11:12.04:0,12,171	0/0:36,0:37:39.75:0,40,692	0/1:27,4:29:91.49:91,0,327	0/1:13,0:10:3.90:15,0,4	0/0:8,0:6:0.43:0,0,1	0/1:15,0:16:35.25:35,0,69	0/0:27,0:28:41.02:0,41,570	0/1:22,1:17:15.20:15,0,202	0/1:16,6:21:74.24:85,0,74	0/1:18,0:14:9.51:10,0,24	1/1:10,0:10:1.16:3,1,0	0/0:8,0:8:0.47:0,0,1	0/1:33,1:29:71.28:71,0,399	0/1:23,2:24:21.49:21,0,466	0/0:12,0:8:13.85:0,14,161
chr10	71521149	.	T	TA	1120.22	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.046;DP=642;FS=0.637;HRun=8;HaplotypeScore=61.5156;InbreedingCoeff=0.9579;MQ=71.04;MQ0=0;MQRankSum=-0.923;QD=28.01;ReadPosRankSum=1.620;VQSLOD=4.1787;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,37:40:99:1215,105,0	0/0:5,0:5:11.99:0,12,105	0/0:18,0:18:25.02:0,25,246	0/0:18,0:15:26.87:0,27,219	0/0:30,0:30:77.56:0,78,675	0/0:26,0:25:75.03:0,75,682	0/0:20,0:20:44.95:0,45,396	0/0:26,0:26:68.99:0,69,617	0/0:22,0:22:54.01:0,54,487	0/0:33,0:33:93.03:0,93,840	0/0:27,0:27:63.02:0,63,576	0/0:22,0:22:60:0,60,538	0/0:27,0:27:69:0,69,620	0/0:17,0:17:39:0,39,357	0/0:21,0:21:54.01:0,54,489	0/0:8,0:8:24:0,24,215	0/0:24,0:24:66.02:0,66,599	0/0:17,0:17:47.98:0,48,431	0/0:20,0:20:41.98:0,42,379	0/0:22,0:22:66.04:0,66,604	0/0:21,0:21:60.02:0,60,546	0/0:28,0:28:77.95:0,78,691	0/0:27,0:27:69.01:0,69,625	0/0:27,0:28:77.07:0,77,688	0/0:22,0:22:66.02:0,66,598	0/0:24,0:24:66.03:0,66,600	0/0:39,0:39:95.97:0,96,861	0/0:9,0:9:18:0,18,165
chr10	71523326	.	AACACACACACACACACACACAC	A	1379.03	PASS	AB=0.952;AC=11;AF=0.229;AN=48;BaseQRankSum=3.023;DP=462;FS=5.291;HRun=0;HaplotypeScore=224.1575;InbreedingCoeff=0.6947;MQ=59.87;MQ0=16;MQRankSum=-1.371;QD=12.65;ReadPosRankSum=1.630;VQSLOD=2.4202;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:33,0:22:3.01:0,3,42	0/0:16,0:16:18.02:0,18,1431	0/0:19,0:18:15.03:0,15,1120	0/0:14,0:14:3.01:0,3,297	0/0:16,0:16:10.08:0,10,167	0/0:17,0:17:12.04:0,12,1147	1/1:14,1:15:6:199,6,0	1/1:9,1:10:9.01:270,9,0	0/0:10,0:10:21.07:0,21,1545	0/0:6,0:6:1.82:0,2,5	0/0:7,0:8:12.04:0,12,802	0/0:10,0:10:6.02:0,6,544	0/0:17,0:17:30.10:0,30,2300	1/1:27,1:28:7.54:197,8,0	./.	0/0:11,0:11:17.48:0,17,1034	0/0:9,0:9:15.03:0,15,687	0/0:29,0:29:36.10:0,36,2459	0/0:13,0:13:9.03:0,9,657	1/1:19,0:20:8.06:313,8,0	0/1:19,0:19:0:0,0,0	1/1:11,3:13:12.03:542,12,0	0/0:19,0:19:11.14:0,11,2525	0/0:11,0:11:9.03:0,9,783	0/0:9,0:8:15.05:0,15,916
chr10	71523408	.	CT	C	1041.42	PASS	AB=0.864;AC=15;AF=0.268;AN=56;BaseQRankSum=1.812;DP=515;FS=0.493;HRun=13;HaplotypeScore=83.2459;InbreedingCoeff=0.3916;MQ=69.97;MQ0=4;MQRankSum=-0.539;QD=5.34;ReadPosRankSum=2.268;VQSLOD=2.4592;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:29:34.37:0,34,182	0/1:3,7:10:5.31:129,0,5	0/1:29,0:16:6.23:6,0,55	0/0:15,0:11:9.66:0,10,48	0/1:12,2:16:14.12:14,0,159	0/0:20,1:22:30.26:0,30,433	0/0:30,1:36:60.68:0,61,664	0/0:24,0:25:46.72:0,47,488	0/1:16,2:18:7.83:8,0,188	1/1:5,15:20:41.71:306,42,0	1/1:5,11:16:23.70:170,24,0	0/0:13,0:13:26.87:0,27,233	0/0:18,0:19:25.73:0,26,138	0/0:12,2:14:2.24:0,2,182	0/1:15,1:17:3.67:4,0,267	0/1:10,1:11:6.89:7,0,102	1/1:7,25:32:56.33:404,56,0	0/0:14,0:14:15.18:0,15,86	0/0:12,0:12:30.05:0,30,291	0/0:11,0:12:20.87:0,21,189	0/0:24,1:26:34.51:0,35,357	0/0:9,0:10:20.86:0,21,184	0/0:19,0:19:24.84:0,25,123	0/0:20,0:19:40.07:0,40,212	1/1:5,6:13:17.68:130,18,0	0/1:10,3:13:35.61:36,0,158	0/0:21,1:22:32.16:0,32,468	0/0:9,1:10:5.06:0,5,183
chr10	71523421	.	T	TTC	1409.45	PASS	AB=0.759;AC=8;AF=0.143;AN=56;BaseQRankSum=-0.363;DP=551;FS=1.164;HRun=0;HaplotypeScore=89.4071;InbreedingCoeff=0.7158;MQ=67.37;MQ0=5;MQRankSum=-0.021;QD=12.93;ReadPosRankSum=1.859;VQSLOD=3.6555;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:12.88:108,0,13	0/0:13,0:13:38.60:0,39,312	0/0:28,0:14:2.40:0,2,120	0/0:16,0:12:6.71:0,7,85	0/0:13,0:13:31.42:0,31,275	0/0:22,0:22:58.47:0,58,681	0/0:38,0:38:79.49:0,79,910	0/0:29,0:28:52.34:0,52,737	0/0:18,0:18:50.53:0,51,491	0/0:26,0:26:68.88:0,69,573	0/0:16,0:16:37.97:0,38,300	0/0:15,0:15:16.23:0,16,329	1/1:1,19:22:26.67:383,27,0	0/0:15,0:15:39.03:0,39,418	0/0:20,0:20:59.29:0,59,564	0/0:9,0:9:20.89:0,21,203	0/0:31,0:31:58.12:0,58,491	0/1:1,13:14:1.82:191,0,2	0/0:16,0:16:45.02:0,45,487	0/0:10,0:10:26.21:0,26,270	0/0:28,0:28:53.62:0,54,561	0/0:20,0:20:58.91:0,59,524	1/1:1,3:25:24.38:297,24,0	1/1:1,18:22:36.04:583,36,0	0/0:12,0:12:32.55:0,33,254	0/0:16,0:16:41.25:0,41,363	0/0:20,0:20:53.73:0,54,617	0/0:9,0:9:17.83:0,18,178
chr10	71524028	.	C	CAAT	1173.23	PASS	AB=0.823;AC=14;AF=0.368;AN=38;BaseQRankSum=-1.940;DP=211;FS=7.056;HRun=0;HaplotypeScore=35.3375;InbreedingCoeff=0.4656;MQ=82.71;MQ0=0;MQRankSum=-0.221;QD=12.89;ReadPosRankSum=2.016;VQSLOD=1.7621;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:9:8.93:0,9,62	./.	./.	./.	0/0:6,0:6:6.02:0,6,78	0/0:11,0:11:12.03:0,12,143	0/0:6,0:6:9.03:0,9,118	0/1:29,0:29:25.96:26,0,62	./.	1/1:2,2:5:5.99:79,6,0	1/1:0,1:2:3.01:57,3,0	./.	1/1:5,0:5:3.01:38,3,0	0/0:7,0:7:9.03:0,9,118	0/0:6,0:6:9.02:0,9,104	0/0:5,0:5:3.01:0,3,39	0/1:9,11:20:3.28:596,0,3	1/1:15,0:16:21.07:283,21,0	0/0:4,0:4:3.01:0,3,39	0/0:5,0:7:5.95:0,6,42	./.	./.	./.	./.	1/1:5,4:9:9.03:172,9,0	1/1:5,0:5:3.01:57,3,0	0/0:7,0:8:12.01:0,12,137	0/0:8,0:8:6.02:0,6,79
chr10	71524078	.	T	TA	1055.77	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=-0.540;DP=294;FS=3.695;HRun=7;HaplotypeScore=36.2435;InbreedingCoeff=0.9508;MQ=87.29;MQ0=2;MQRankSum=-2.450;QD=22.00;ReadPosRankSum=1.909;VQSLOD=2.7927;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:15:36.11:433,36,0	0/0:5,0:5:14.89:0,15,131	0/0:18,0:17:19.14:0,19,305	0/0:13,0:10:15.01:0,15,145	0/0:10,0:10:30.05:0,30,290	0/0:10,0:10:30.02:0,30,278	0/0:9,0:9:27.04:0,27,261	0/0:36,0:36:87.11:0,87,830	0/0:5,0:5:12.01:0,12,116	0/0:7,0:7:18.03:0,18,174	0/0:9,0:9:27.04:0,27,257	0/0:9,0:9:27.04:0,27,261	1/1:1,10:11:21.06:254,21,0	0/0:5,0:5:15.02:0,15,141	0/0:11,0:11:33.04:0,33,313	0/0:5,0:5:15.02:0,15,145	0/0:19,0:19:42.03:0,42,394	1/1:5,12:17:30.04:345,30,0	0/0:15,0:15:40.61:0,41,379	0/0:12,0:12:33.03:0,33,311	0/0:6,0:6:15:0,15,138	0/0:6,0:6:18.03:0,18,174	1/1:0,5:5:15.05:181,15,0	./.	0/0:8,0:8:20.71:0,21,185	0/0:5,0:5:15.02:0,15,145	0/0:12,0:12:33.05:0,33,319	0/0:10,0:10:30.01:0,30,281
chr10	71525703	.	CTG	C	2081.01	PASS	AB=0.937;AC=25;AF=0.446;AN=56;BaseQRankSum=10.087;DP=865;FS=0.000;HRun=0;HaplotypeScore=144.9371;InbreedingCoeff=0.4445;MQ=76.31;MQ0=21;MQRankSum=-3.029;QD=6.19;ReadPosRankSum=2.943;VQSLOD=3.2477;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,1:48:47.70:0,48,1301	1/1:3,6:9:15.04:172,15,0	0/0:94,0:32:23.65:0,24,377	0/0:103,0:45:41.96:0,42,599	0/0:24,0:24:45.03:0,45,614	0/1:13,2:15:4.39:4,0,386	0/0:36,2:39:1.11:0,1,1016	0/0:16,0:16:22.30:0,22,287	0/0:23,2:25:7.64:0,8,560	1/1:6,15:23:50.53:545,51,0	1/1:7,5:13:11.58:102,12,0	0/0:29,4:34:0.21:0,0,837	1/1:2,0:14:11.32:55,11,0	0/1:24,2:26:14.90:15,0,640	0/0:21,2:22:19.63:0,20,683	0/0:29,1:30:25.24:0,25,826	1/1:9,26:36:59.71:669,60,0	1/1:5,0:26:32.85:154,33,0	0/1:19,1:20:17.32:17,0,173	0/0:11,2:13:3.34:0,3,303	0/0:76,3:79:16.99:0,17,1816	0/1:15,0:15:10.29:10,0,301	1/1:3,0:19:15.68:73,16,0	1/1:14,0:42:15.88:73,16,0	1/1:6,15:21:29.91:314,30,0	0/1:22,3:24:58.36:58,0,494	0/1:15,2:18:1.39:1,0,399	0/1:13,0:12:8.51:9,0,301
chr10	71525842	.	A	AC	5697.86	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=1.294;DP=667;FS=26.044;HRun=0;HaplotypeScore=72.7752;InbreedingCoeff=0.9955;MQ=79.90;MQ0=0;MQRankSum=-4.092;QD=37.00;ReadPosRankSum=3.062;VQSLOD=3.1145;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,51:51:99:1876,120,0	0/0:8,0:8:24.06:0,24,314	0/0:18,0:18:51.14:0,51,652	0/0:21,0:22:59.58:0,60,747	0/0:13,0:13:39.13:0,39,543	0/0:26,0:26:78.26:0,78,1086	0/0:27,0:27:78.26:0,78,1088	0/0:22,0:22:58.06:0,58,759	0/0:27,0:27:78.24:0,78,1060	0/0:28,0:28:81.24:0,81,1082	0/0:5,0:5:14.94:0,15,184	0/0:32,0:32:96.29:0,96,1308	1/1:0,17:17:42.14:654,42,0	0/0:25,0:25:75.21:0,75,1005	0/0:26,0:26:78.25:0,78,1072	0/0:26,0:26:78.24:0,78,1061	0/0:35,0:35:99:0,105,1382	1/1:0,27:27:69.17:1049,69,0	0/0:14,0:14:42.14:0,42,581	0/0:14,0:14:42.05:0,42,530	0/0:38,0:38:99:0,111,1516	0/0:15,0:15:45.08:0,45,557	1/1:3,10:13:27.06:418,27,0	1/1:0,46:46:99:1700,111,0	0/0:34,0:33:99:0,99,1313	0/0:22,0:22:66.22:0,66,913	0/0:21,0:21:63.20:0,63,863	0/0:15,0:15:45.15:0,45,628
chr10	71526411	.	TCCCAAGAACTGAG	T	7052.99	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.759;DP=616;FS=12.227;HRun=0;HaplotypeScore=233.8932;InbreedingCoeff=0.9818;MQ=88.21;MQ0=0;MQRankSum=-12.758;QD=73.47;ReadPosRankSum=0.115;VQSLOD=3.0650;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,35:44:87.30:3118,87,0	0/0:9,0:9:24.08:0,24,1440	0/0:26,0:26:66.23:0,66,3382	0/0:22,0:22:60.13:0,60,2761	0/0:16,0:16:42.14:0,42,2343	0/0:22,0:22:63.22:0,63,3986	0/0:22,0:22:60.21:0,60,3476	0/0:29,0:29:84.26:0,84,4041	0/0:22,0:22:60.19:0,60,3158	0/0:16,0:16:42.13:0,42,2436	0/0:10,0:10:30.10:0,30,1797	0/0:27,0:27:75.26:0,75,4577	1/1:3,10:13:30.10:1189,30,0	0/0:29,0:29:84.26:0,84,4996	0/0:40,0:40:99:0,117,7353	0/0:18,0:18:54.19:0,54,3514	0/0:27,0:27:78.25:0,78,4718	1/1:3,4:7:9.03:290,9,0	0/0:24,0:24:66.23:0,66,3739	0/0:12,0:12:36.12:0,36,2196	0/0:50,0:50:99:0,151,9011	0/0:22,0:22:66.22:0,66,3696	1/1:5,18:23:48.13:1901,48,0	1/1:4,5:9:15.05:556,15,0	0/0:20,0:20:51.18:0,51,3135	0/0:20,0:20:60.21:0,60,3760	0/0:26,0:26:66.23:0,66,4026	0/0:11,0:11:33.11:0,33,2159
chr10	71526520	.	G	GCC	2073.18	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=7.580;DP=565;FS=4.735;HRun=10;HaplotypeScore=105.3429;InbreedingCoeff=0.8727;MQ=71.99;MQ0=0;MQRankSum=-3.792;QD=12.56;ReadPosRankSum=0.782;VQSLOD=1.8512;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:22.39:0,22,97	1/1:7,0:7:9.85:73,10,0	0/0:22,0:23:31.97:0,32,253	0/0:11,0:12:18.90:0,19,127	0/0:18,0:20:10.71:0,11,291	0/0:18,0:18:29.97:0,30,305	0/0:32,0:34:80.55:0,81,786	0/0:15,0:17:23.70:0,24,225	0/1:14,0:14:13.21:13,0,269	1/1:5,1:9:11.01:102,11,0	1/1:2,8:12:8.38:77,8,0	0/0:24,0:24:26:0,26,456	1/1:27,0:27:71.76:555,72,0	0/0:21,0:22:53.81:0,54,523	0/0:20,0:21:50.79:0,51,493	0/0:20,0:20:48.08:0,48,488	1/1:5,18:26:34.83:432,35,0	1/1:17,0:17:38.79:296,39,0	0/0:22,0:26:41.75:0,42,402	0/0:11,0:11:21.02:0,21,213	0/0:40,0:40:93.15:0,93,939	0/0:12,0:12:24.02:0,24,244	1/1:27,0:27:56.73:430,57,0	1/1:13,0:13:26.93:212,27,0	1/1:6,7:13:6.49:90,6,0	0/0:21,0:23:32.72:0,33,306	0/0:16,0:17:38.47:0,38,351	0/0:5,0:5:15.03:0,15,153
chr10	71526527	.	C	CA	1400.80	PASS	AB=0.576;AC=7;AF=0.125;AN=56;BaseQRankSum=11.007;DP=579;FS=11.177;HRun=0;HaplotypeScore=94.0529;InbreedingCoeff=0.7599;MQ=71.73;MQ0=0;MQRankSum=-7.328;QD=15.23;ReadPosRankSum=5.466;VQSLOD=5.3240;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:22.31:0,22,160	0/0:6,0:6:12.59:0,13,71	0/0:24,0:24:70.68:0,71,683	0/0:13,0:13:28.85:0,29,285	0/0:20,0:20:51.31:0,51,570	0/0:16,0:16:42.04:0,42,523	0/0:35,0:35:99:0,102,1265	0/0:17,0:17:45:0,45,493	0/0:17,0:17:44.23:0,44,526	0/0:9,0:9:5.47:0,5,110	0/0:16,0:16:8.39:0,8,94	0/0:21,0:21:58.03:0,58,745	1/1:5,27:32:47.36:620,47,0	0/0:22,0:22:63.11:0,63,806	0/0:22,0:22:60.11:0,60,767	0/0:20,0:20:60.17:0,60,776	0/0:32,0:32:36.52:0,37,306	0/1:5,14:19:21.12:313,0,21	0/0:25,0:25:69.02:0,69,779	0/0:11,0:11:27.04:0,27,338	0/0:37,0:37:99:0,108,1427	0/0:15,0:15:41.69:0,42,491	1/1:7,19:26:11.95:402,12,0	1/1:4,11:15:14.29:209,14,0	0/0:15,0:15:21.77:0,22,168	0/0:18,0:18:45.04:0,45,534	0/0:20,0:19:56.94:0,57,622	0/0:5,0:5:15.05:0,15,209
chr10	71526529	.	C	CCA	3599.51	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=13.701;DP=642;FS=2.162;HRun=0;HaplotypeScore=132.0335;InbreedingCoeff=0.6214;MQ=72.60;MQ0=0;MQRankSum=-4.761;QD=14.81;ReadPosRankSum=2.539;VQSLOD=3.8328;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:57:99:613,110,0	0/0:9,0:9:5.73:0,6,43	0/0:25,0:25:55.16:0,55,638	0/0:15,0:15:5.74:0,6,259	0/0:22,0:22:38.96:0,39,461	0/0:17,0:17:36.10:0,36,461	0/0:37,0:37:90.20:0,90,1142	0/0:19,0:19:33.01:0,33,390	0/0:17,0:17:41.90:0,42,492	0/1:9,0:9:15.48:15,0,55	0/1:24,0:24:1.30:1,0,72	0/0:26,0:26:51.06:0,51,667	1/1:10,23:33:87.10:1056,87,0	0/0:22,0:22:57.13:0,57,724	0/0:23,0:23:51.13:0,51,664	0/0:20,0:20:54.16:0,54,702	0/1:36,0:36:99:115,0,123	1/1:9,10:19:51.02:611,51,0	0/0:23,0:23:57.07:0,57,659	0/0:12,0:12:24.48:0,24,289	0/0:41,0:41:99:0,102,1301	0/0:20,0:20:35.73:0,36,427	1/1:8,18:26:63.08:732,63,0	1/1:9,11:20:39.06:441,39,0	0/1:19,0:19:14.53:15,0,105	0/0:20,0:20:42.07:0,42,508	0/0:25,0:24:51.04:0,51,589	0/0:6,0:6:15.05:0,15,204
chr10	71527261	.	GA	G	3105.52	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.855;DP=664;FS=3.996;HRun=1;HaplotypeScore=79.5524;InbreedingCoeff=0.9943;MQ=89.07;MQ0=0;MQRankSum=-2.277;QD=35.70;ReadPosRankSum=2.338;VQSLOD=4.0902;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,2248	0/0:6,0:6:15.05:0,15,240	0/0:25,0:25:75.25:0,75,1154	0/0:24,0:24:59.39:0,59,909	0/0:21,0:21:63.21:0,63,1007	0/0:17,0:17:51.17:0,51,815	0/0:30,0:30:90.31:0,90,1434	0/0:25,0:25:72.25:0,72,1152	0/0:25,0:25:75.26:0,75,1194	0/0:32,0:32:93.32:0,93,1485	0/0:11,0:11:33.11:0,33,527	0/0:38,0:38:99:0,114,1823	1/1:0,23:23:66.22:923,66,0	0/0:20,0:20:60.18:0,60,909	0/0:19,0:19:57.19:0,57,908	0/0:21,0:21:63.21:0,63,1007	0/0:36,0:36:99:0,108,1683	1/1:0,25:25:66.22:920,66,0	0/0:23,0:23:69.24:0,69,1101	0/0:19,0:19:57.19:0,57,893	0/0:44,0:44:99:0,126,1923	0/0:20,0:20:60.19:0,60,936	1/1:1,16:17:41.98:585,42,0	1/1:1,21:22:60.20:838,60,0	0/0:11,0:11:33.11:0,33,528	0/0:30,0:30:90.30:0,90,1414	0/0:25,0:25:75.26:0,75,1199	0/0:7,0:7:21.07:0,21,336
chr10	71527685	.	CGGGGGGGGGG	C	4130.31	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=7.572;DP=372;FS=27.561;HRun=15;HaplotypeScore=107.9678;InbreedingCoeff=0.7405;MQ=72.61;MQ0=0;MQRankSum=-8.251;QD=50.99;ReadPosRankSum=8.541;VQSLOD=-0.1205;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:19:21.05:0,21,664	0/0:5,0:5:12.04:0,12,345	0/0:15,0:13:27.03:0,27,760	0/0:14,0:14:6.47:0,6,495	0/0:8,0:8:9.03:0,9,314	0/0:14,0:14:10.37:0,10,157	0/0:24,0:28:24.95:0,25,690	0/0:16,0:16:18.03:0,18,237	0/0:8,0:8:12.03:0,12,342	0/0:10,0:10:6:0,6,51	./.	0/0:11,0:11:5.45:0,5,223	1/1:2,19:21:51.17:1409,51,0	0/0:11,0:11:8.22:0,8,280	0/0:12,0:12:24.08:0,24,892	0/0:12,0:12:12.04:0,12,457	0/0:19,0:20:36.12:0,36,1363	1/1:4,16:20:36.05:1029,36,0	0/0:8,0:8:3.01:0,3,133	0/0:8,0:8:6.02:0,6,298	0/0:14,0:13:8.94:0,9,295	0/0:7,0:7:14.06:0,14,252	1/1:4,11:15:15.51:429,16,0	1/1:7,18:25:45.04:1263,45,0	0/0:10,0:10:14.36:0,14,215	0/0:16,0:17:6.48:0,6,55	0/0:12,0:12:15.04:0,15,481	./.
chr10	71528848	.	CGA	C	1538.33	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.062;DP=709;FS=10.096;HRun=0;HaplotypeScore=82.4322;InbreedingCoeff=0.9959;MQ=82.46;MQ0=1;MQRankSum=-4.435;QD=34.96;ReadPosRankSum=3.263;VQSLOD=5.6292;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,41:43:99:1633,114,0	0/0:7,0:7:21.07:0,21,369	0/0:25,0:25:67.77:0,68,1171	0/0:16,0:16:39.75:0,40,739	0/0:25,0:25:72.25:0,72,1298	0/0:16,0:16:48.15:0,48,839	0/0:35,0:35:99:0,105,1861	0/0:33,0:33:96.33:0,96,1740	0/0:23,0:23:66.21:0,66,1178	0/0:25,0:25:75.26:0,75,1368	0/0:20,0:20:57.18:0,57,971	0/0:22,0:22:63.22:0,63,1155	0/0:26,0:26:78.27:0,78,1425	0/0:17,0:17:48.16:0,48,861	0/0:38,0:38:99:0,111,1989	0/0:21,0:21:60.21:0,60,1099	0/0:20,0:20:57.20:0,57,1044	0/0:23,0:23:69.24:0,69,1265	0/0:36,0:36:96.32:0,96,1720	0/0:23,0:23:66.20:0,66,1142	0/0:36,0:36:99:0,99,1797	0/0:23,0:23:66.21:0,66,1164	0/0:18,0:18:45.15:0,45,807	0/0:31,0:31:93.32:0,93,1702	0/0:27,0:27:81.28:0,81,1473	0/0:32,0:32:90.30:0,90,1610	0/0:31,0:31:90.28:0,90,1588	0/0:16,0:16:48.16:0,48,873
chr10	71529939	.	C	CGTGTGTGTGTGTGTGT	3421.47	PASS	AB=0.971;AC=11;AF=0.196;AN=56;BaseQRankSum=6.479;DP=723;FS=9.294;HRun=0;HaplotypeScore=323.9044;InbreedingCoeff=0.8576;MQ=68.32;MQ0=0;MQRankSum=-6.292;QD=22.96;ReadPosRankSum=-2.188;VQSLOD=0.7774;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,8:43:17.98:1152,18,0	0/0:13,0:13:30.10:0,30,1307	0/1:32,0:26:4.51:5,0,1138	0/0:28,0:25:48.09:0,48,1421	0/0:21,0:22:54.13:0,54,1968	0/0:15,0:15:39.12:0,39,1385	0/0:34,0:34:81.26:0,81,3255	0/0:34,0:34:72.24:0,72,2609	0/0:18,0:19:51.18:0,51,1942	0/0:25,0:25:60.21:0,60,2488	0/0:29,0:30:75.26:0,75,2884	0/0:27,0:27:78.23:0,78,3095	1/1:22,0:21:29.63:1066,30,0	0/0:25,0:25:69.24:0,69,2547	0/0:29,0:29:63.21:0,63,2646	0/0:30,0:30:78.27:0,78,3362	0/0:34,0:38:99:0,102,4213	1/1:13,0:13:18.06:897,18,0	0/0:33,0:34:78.22:0,78,3004	0/0:23,0:24:66.23:0,66,2649	0/0:46,0:46:99:0,99,3656	0/0:18,0:18:39.10:0,39,1455	1/1:21,0:21:6.01:110,6,0	1/1:17,0:17:5.60:192,6,0	0/0:21,0:21:57.17:0,57,2130	0/0:27,0:27:66.23:0,66,2571	0/0:26,0:26:57.17:0,57,2254	0/0:7,0:8:21.07:0,21,871
chr10	71530888	.	CA	C	5683.23	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=17.161;DP=822;FS=6.435;HRun=2;HaplotypeScore=99.8070;InbreedingCoeff=0.9981;MQ=81.99;MQ0=0;MQRankSum=-0.600;QD=34.65;ReadPosRankSum=4.321;VQSLOD=4.9005;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,45:47:99:1596,123,0	0/0:6,0:6:18.02:0,18,245	0/0:21,0:21:51.16:0,51,712	0/0:24,0:24:56.41:0,56,725	0/0:15,0:15:42.10:0,42,604	0/0:21,0:21:63.20:0,63,922	0/0:43,0:43:99:0,123,1752	0/0:32,0:32:90.30:0,90,1329	0/0:39,0:39:99:0,111,1662	0/0:27,0:27:75.23:0,75,1085	0/0:16,0:16:45.15:0,45,673	0/0:43,0:43:99:0,126,1886	1/1:0,40:40:99:1480,114,0	0/0:42,0:42:99:0,123,1840	0/0:35,0:35:99:0,105,1533	0/0:39,0:39:99:0,117,1736	0/0:34,0:34:99:0,99,1480	1/1:0,22:22:57.18:738,57,0	0/0:29,0:29:87.27:0,87,1271	0/0:19,0:19:57.19:0,57,845	0/0:64,0:64:99:0,190,2782	0/0:20,0:20:60.19:0,60,865	1/1:0,18:18:48.16:623,48,0	1/1:0,37:37:96.31:1247,96,0	0/0:18,0:18:54.18:0,54,808	0/0:31,0:31:90.30:0,90,1348	0/0:27,0:27:75.25:0,75,1123	0/0:13,0:13:36.07:0,36,493
chr10	71531004	.	T	TCAGGGGG	1473.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.179;DP=708;FS=2.239;HRun=0;HaplotypeScore=164.6506;InbreedingCoeff=0.9985;MQ=92.90;MQ0=0;MQRankSum=-6.875;QD=43.34;ReadPosRankSum=-2.000;VQSLOD=3.2298;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,23:34:45.60:1568,46,0	0/0:13,0:13:39.13:0,39,971	0/0:30,0:30:75.17:0,75,1617	0/0:36,0:36:72.68:0,73,1701	0/0:23,0:23:60.21:0,60,1431	0/0:14,0:14:39.13:0,39,942	0/0:35,0:35:84.28:0,84,2091	0/0:36,0:36:87.93:0,88,2125	0/0:21,0:21:60.21:0,60,1494	0/0:19,0:19:57.20:0,57,1420	0/0:12,0:12:33.11:0,33,763	0/0:36,0:36:96.33:0,96,2372	0/0:30,0:30:75.22:0,75,1737	0/0:20,0:20:57.20:0,57,1420	0/0:29,0:29:81.24:0,81,1911	0/0:29,0:29:81.28:0,81,2007	0/0:26,0:26:78.27:0,78,1880	0/0:29,0:29:75.21:0,75,1719	0/0:14,0:14:39.13:0,39,969	0/0:19,0:19:48.16:0,48,1165	0/0:34,0:34:90.29:0,90,2147	0/0:27,0:27:72.25:0,72,1723	0/0:9,0:9:27.09:0,27,672	0/0:35,0:35:99:0,99,2422	0/0:25,0:25:72.25:0,72,1737	0/0:32,0:32:93.32:0,93,2287	0/0:25,0:25:66.23:0,66,1630	0/0:16,0:16:39.13:0,39,936
chr10	71531244	.	GAA	G	1060.34	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=5.232;DP=498;FS=0.518;HRun=15;HaplotypeScore=77.6853;InbreedingCoeff=0.8499;MQ=49.21;MQ0=26;MQRankSum=-0.156;QD=7.68;ReadPosRankSum=5.502;VQSLOD=0.5873;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:38:48.66:207,49,0	0/0:3,0:4:8.84:0,9,67	0/0:5,0:1:3:0,3,29	0/0:7,0:3:6.01:0,6,61	0/0:17,0:18:22.40:0,22,297	0/0:11,0:11:26.27:0,26,313	0/0:15,0:15:39.08:0,39,507	0/0:31,0:31:62.33:0,62,686	0/0:18,0:18:44.36:0,44,430	0/0:18,0:21:36.73:0,37,321	0/0:10,0:16:26.20:0,26,227	0/0:13,0:13:33.22:0,33,381	1/1:16,7:23:40.11:324,40,0	0/0:17,0:18:41.27:0,41,453	0/0:15,0:15:37.42:0,37,354	0/0:14,0:14:23.94:0,24,262	0/0:12,0:27:35.17:0,35,326	1/1:12,19:28:35.81:360,36,0	0/0:19,0:19:38.45:0,38,405	0/0:13,0:14:27.77:0,28,241	0/0:7,0:7:12.04:0,12,154	0/0:17,0:16:35.97:0,36,407	1/1:4,10:14:20.93:181,21,0	1/1:9,7:14:14.32:158,14,0	0/1:9,0:11:1.16:1,0,162	0/0:19,0:21:56.61:0,57,585	0/0:13,0:15:40.02:0,40,393	0/0:21,0:18:18.53:0,19,336
chr10	71531250	.	AAAAAAAAAAG	A	1498.68	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.928;DP=530;FS=0.868;HRun=0;HaplotypeScore=153.7553;InbreedingCoeff=0.8452;MQ=55.47;MQ0=25;MQRankSum=-5.663;QD=36.55;ReadPosRankSum=3.901;VQSLOD=3.2399;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,30:38:56.86:1593,57,0	0/0:3,0:3:9.03:0,9,359	0/0:6,0:2:5.99:0,6,111	0/0:12,0:7:15.35:0,15,338	0/0:19,0:19:48.42:0,48,1486	0/0:12,0:12:36.12:0,36,1364	0/0:15,0:15:45.15:0,45,1940	0/0:36,0:36:91.09:0,91,3064	0/0:18,0:18:54.18:0,54,1822	0/0:22,0:22:60.20:0,60,1648	0/0:18,0:17:41.49:0,41,1246	0/0:14,0:14:42.14:0,42,1485	0/0:23,0:23:63.22:0,63,1762	0/0:19,0:17:48.16:0,48,1959	0/0:18,0:18:51.17:0,51,1751	0/0:13,0:13:30.36:0,30,1036	0/0:36,0:32:51.10:0,51,1791	0/0:32,0:28:54.18:0,54,1656	0/0:19,0:19:45.15:0,45,1809	0/0:17,0:16:48.16:0,48,1544	0/0:11,0:11:23.75:0,24,791	0/0:16,0:15:45.11:0,45,1614	0/0:12,0:12:30.01:0,30,785	0/0:19,0:16:36.12:0,36,960	0/0:13,0:12:30.10:0,30,1063	0/0:25,0:23:69.07:0,69,2462	0/0:19,0:19:57.20:0,57,2003	0/0:22,0:19:57.12:0,57,1918
chr10	71531258	.	AAG	A	477.73	PASS	AB=0.936;AC=6;AF=0.107;AN=56;BaseQRankSum=9.891;DP=530;FS=44.422;HRun=0;HaplotypeScore=81.8855;InbreedingCoeff=0.2286;MQ=64.54;MQ0=15;MQRankSum=-4.738;QD=4.34;ReadPosRankSum=4.295;VQSLOD=0.6092;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:30:56.25:373,56,0	0/0:7,0:7:20.97:0,21,178	0/0:7,0:3:8.99:0,9,90	0/0:18,0:13:13.88:0,14,240	0/0:19,0:19:36.91:0,37,446	0/0:14,0:14:35.75:0,36,404	0/0:19,0:19:53.95:0,54,645	0/0:31,0:31:72.73:0,73,908	0/0:18,0:18:32.79:0,33,362	0/0:21,0:21:29.38:0,29,449	0/0:19,0:18:27.97:0,28,329	0/0:16,0:16:44.80:0,45,441	0/1:17,2:19:66.52:105,0,67	0/0:23,0:23:64.92:0,65,636	0/0:19,0:19:43.97:0,44,465	0/0:13,0:13:23.72:0,24,257	0/0:38,0:36:67.51:0,68,572	0/1:28,1:26:27.75:56,0,28	0/0:22,0:22:58.70:0,59,651	0/0:16,0:16:17.99:0,18,370	0/0:10,0:10:8.13:0,8,243	0/0:15,0:15:16.72:0,17,395	0/1:12,1:13:34.69:35,0,39	0/1:16,1:15:40.35:40,0,48	0/0:13,0:12:26.45:0,26,235	0/0:26,0:26:55.74:0,56,683	0/0:18,0:18:42.32:0,42,456	0/0:18,0:16:30.08:0,30,374
chr10	71533342	.	AG	A	1719.49	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.201;DP=476;FS=1.165;HRun=3;HaplotypeScore=46.6079;InbreedingCoeff=0.8746;MQ=75.59;MQ0=0;MQRankSum=-3.098;QD=31.26;ReadPosRankSum=3.341;VQSLOD=3.2307;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1575	0/0:3,0:3:9:0,9,107	0/0:9,0:9:24.03:0,24,300	0/0:10,0:10:14.98:0,15,129	0/0:7,0:7:18.06:0,18,258	0/0:19,0:19:54.16:0,54,757	0/0:25,0:25:72.21:0,72,993	0/0:20,0:20:48.16:0,48,691	0/0:22,0:22:63.21:0,63,904	0/0:7,0:7:18.06:0,18,256	0/0:5,0:5:12.04:0,12,172	0/0:23,0:23:69.23:0,69,994	1/1:1,20:21:60.19:742,60,0	0/0:32,0:32:96.31:0,96,1358	0/0:25,0:25:72.23:0,72,1015	0/0:23,0:23:66.21:0,66,924	0/0:33,0:33:96.32:0,96,1373	0/0:19,0:19:57.19:0,57,813	0/0:11,0:11:30.10:0,30,430	0/0:1,0:1:3.01:0,3,43	0/0:32,0:32:96.28:0,96,1340	0/0:7,0:7:18.06:0,18,258	1/1:0,3:3:9.03:112,9,0	1/1:0,31:31:81.25:1003,81,0	0/0:6,0:6:18.05:0,18,240	0/0:14,0:14:36.12:0,36,516	0/0:22,0:22:66.21:0,66,929	0/0:7,0:7:21.07:0,21,302
chr10	71534200	.	T	TC	2787.94	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-10.594;DP=717;FS=11.785;HRun=1;HaplotypeScore=68.1871;InbreedingCoeff=0.9908;MQ=88.16;MQ0=0;MQRankSum=-6.373;QD=37.67;ReadPosRankSum=-0.357;VQSLOD=2.9481;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,43:45:99:1753,117,0	0/0:8,0:8:24.05:0,24,295	0/0:22,0:22:60.19:0,60,762	0/0:29,0:29:67.76:0,68,835	0/0:27,0:27:72.20:0,72,916	0/0:23,0:23:69.22:0,69,896	0/0:30,0:30:90.29:0,90,1167	0/0:16,0:16:45.15:0,45,584	0/0:25,0:24:75.21:0,75,943	0/0:29,0:29:84.24:0,84,1073	0/0:16,0:16:48.16:0,48,620	0/0:25,0:25:75.24:0,75,973	0/0:24,0:24:72.23:0,72,934	0/0:29,0:29:87.27:0,87,1115	0/0:32,0:32:96.27:0,96,1203	0/0:30,0:30:90.27:0,90,1141	0/0:33,0:33:99:0,99,1284	1/1:2,27:29:78.26:1157,78,0	0/0:25,0:25:69.20:0,69,858	0/0:28,0:28:81.26:0,81,1036	0/0:39,0:39:99:0,114,1479	0/0:16,0:16:45.15:0,45,584	0/0:18,0:18:51.17:0,51,660	0/0:26,0:26:78.25:0,78,1012	0/0:21,0:21:54.18:0,54,701	0/0:30,0:30:87.28:0,87,1130	0/0:35,0:35:99:0,105,1353	0/0:7,0:7:15.05:0,15,195
chr10	71534854	.	C	CA	1634.78	PASS	AB=0.909;AC=22;AF=0.393;AN=56;BaseQRankSum=-2.979;DP=616;FS=2.651;HRun=12;HaplotypeScore=76.9162;InbreedingCoeff=0.5693;MQ=73.42;MQ0=1;MQRankSum=1.921;QD=5.52;ReadPosRankSum=-0.039;VQSLOD=2.1870;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,3:47:69.22:0,69,671	1/1:2,3:6:12.02:117,12,0	0/0:17,0:16:3.55:0,4,63	0/1:11,0:12:5.89:6,0,38	0/0:20,0:21:40.01:0,40,287	0/1:18,1:20:3.39:3,0,131	0/0:21,0:21:38.71:0,39,284	0/1:32,5:38:14.01:14,0,388	0/0:16,2:18:32.50:0,33,238	1/1:9,18:28:53.89:499,54,0	1/1:2,15:17:33:311,33,0	0/0:21,0:23:42.75:0,43,294	1/1:6,0:16:11.39:63,11,0	0/0:23,0:23:50.63:0,51,370	0/1:18,5:23:63.05:63,0,247	0/0:25,1:27:44.49:0,44,327	1/1:4,15:20:21.09:230,21,0	0/0:29,0:31:63.16:0,63,447	0/0:20,1:23:22.42:0,22,304	0/0:16,0:18:43.73:0,44,310	0/0:13,0:15:30.85:0,31,209	0/1:10,1:11:2.35:2,0,148	1/1:4,0:13:12.95:77,13,0	1/1:11,1:30:29.15:147,29,0	1/1:5,14:20:30:282,30,0	0/0:23,1:25:20.53:0,21,303	0/1:36,2:38:19.29:19,0,498	0/0:11,0:11:8.84:0,9,66
chr10	71538521	.	CA	C	1057.66	PASS	AB=0.941;AC=5;AF=0.089;AN=56;BaseQRankSum=7.885;DP=589;FS=7.636;HRun=6;HaplotypeScore=84.2230;InbreedingCoeff=0.7730;MQ=63.05;MQ0=4;MQRankSum=-2.197;QD=19.23;ReadPosRankSum=0.329;VQSLOD=2.7867;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:24:69.17:738,69,0	0/0:13,0:13:33.10:0,33,420	0/0:22,0:15:31.95:0,32,345	0/1:15,1:8:40.54:41,0,78	0/0:26,0:26:78.24:0,78,1006	0/0:32,0:32:93.28:0,93,1206	0/0:13,0:13:39.12:0,39,499	0/0:27,0:27:78.25:0,78,1024	0/0:13,0:13:36.12:0,36,473	0/0:29,0:29:50.75:0,51,958	0/0:26,0:26:78.25:0,78,1011	0/0:16,0:16:42.14:0,42,552	0/0:21,0:21:48.16:0,48,630	0/0:16,0:16:42.11:0,42,522	0/0:21,0:21:60.18:0,60,774	0/0:22,0:22:66.19:0,66,841	0/0:35,0:35:84.27:0,84,1105	1/1:0,14:14:39.08:409,39,0	0/0:30,0:28:72.22:0,72,932	0/0:21,0:21:54.18:0,54,710	0/0:13,0:13:33.11:0,33,433	0/0:6,0:6:15.04:0,15,183	0/0:16,0:16:36.12:0,36,473	0/0:14,0:14:30.10:0,30,395	0/0:39,0:39:99:0,108,1419	0/0:21,0:21:57.19:0,57,749	0/0:35,0:35:99:0,105,1377	0/0:7,0:7:21.07:0,21,276
chr10	71538539	.	A	AAC	8183.44	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-10.164;DP=542;FS=0.000;HRun=0;HaplotypeScore=70.3690;InbreedingCoeff=0.9903;MQ=66.92;MQ0=4;MQRankSum=0.399;QD=37.89;ReadPosRankSum=4.232;VQSLOD=6.7834;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:21:33.03:434,33,0	1/1:0,11:11:30.10:515,30,0	0/0:17,0:14:32.48:0,32,346	0/0:11,0:7:13.31:0,13,181	0/0:22,0:22:66.17:0,66,884	0/0:28,0:28:81.24:0,81,1102	0/0:13,0:13:39.13:0,39,555	0/0:21,0:21:60.15:0,60,785	0/0:11,0:11:30.09:0,30,404	1/1:0,25:25:72.16:1107,72,0	1/1:1,24:25:72.15:1159,72,0	0/0:13,0:13:39.11:0,39,523	1/1:1,16:18:48.16:796,48,0	0/0:16,0:16:44.70:0,45,584	0/0:28,0:28:84.25:0,84,1132	0/0:21,0:21:60.17:0,60,804	1/1:2,35:37:75.24:1278,75,0	1/1:4,0:12:26.98:252,27,0	0/0:25,0:25:72.22:0,72,977	0/0:21,0:21:63.19:0,63,864	0/0:7,0:7:21.07:0,21,299	0/0:4,0:4:12.04:0,12,171	1/1:2,17:18:36.11:622,36,0	1/1:1,10:10:21.07:362,21,0	1/1:0,35:35:96.33:1658,96,0	0/0:20,0:20:60.16:0,60,817	0/0:36,0:36:99:0,108,1502	0/0:12,0:12:36.08:0,36,445
chr10	71538619	.	T	TTGGTGACCTCAAC	3835.83	PASS	AB=0.952;AC=5;AF=0.089;AN=56;BaseQRankSum=-3.286;DP=568;FS=0.000;HRun=0;HaplotypeScore=195.3530;InbreedingCoeff=0.7717;MQ=85.71;MQ0=4;MQRankSum=-7.709;QD=89.21;ReadPosRankSum=-0.800;VQSLOD=3.2779;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,8:17:37.72:2704,38,0	0/0:18,0:17:45.15:0,45,1745	0/0:20,0:19:52.99:0,53,1785	0/0:19,0:19:48.62:0,49,1664	0/0:26,0:26:78.27:0,78,3101	0/0:21,0:21:57.20:0,57,2277	0/0:16,0:16:48.16:0,48,1909	0/0:38,0:38:99:0,102,3593	0/0:17,0:17:48.13:0,48,1698	0/0:23,0:23:69.24:0,69,2718	0/0:19,0:19:57.15:0,57,2138	0/0:18,0:18:54.19:0,54,2091	0/0:18,0:18:48.16:0,48,1898	0/0:25,0:25:75.26:0,75,2779	0/0:28,0:28:81.26:0,81,3020	0/0:32,0:32:96.32:0,96,3584	0/0:36,0:36:87.30:0,87,3298	1/1:0,5:6:15.05:993,15,0	0/0:20,0:20:60.21:0,60,2336	0/0:20,0:20:57.20:0,57,2213	0/0:18,0:18:54.19:0,54,1889	0/0:12,0:12:36.12:0,36,1414	0/0:19,0:18:48.16:0,48,1818	0/0:9,0:8:24.08:0,24,928	0/0:14,0:14:39.13:0,39,1466	0/1:19,1:20:99:139,0,2003	0/0:19,0:19:57.20:0,57,2179	0/0:20,0:20:60.21:0,60,2421
chr10	71539033	.	AAATAATAATAAT	A	298.78	PASS	AC=8;AF=0.200;AN=40;BaseQRankSum=0.512;DP=252;FS=4.872;HRun=0;HaplotypeScore=81.5275;InbreedingCoeff=0.4693;MQ=80.39;MQ0=2;MQRankSum=-1.899;QD=10.30;ReadPosRankSum=0.875;VQSLOD=1.1000;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:12:5.92:0,6,42	1/1:5,1:6:3.01:103,3,0	./.	./.	./.	0/0:3,0:3:3.01:0,3,175	0/0:6,0:6:3.01:0,3,175	0/0:25,0:24:15.01:0,15,164	0/0:9,0:11:6.02:0,6,314	./.	1/1:3,2:5:3.01:52,3,0	0/0:8,0:8:11.25:0,11,526	0/0:7,0:7:6.02:0,6,330	0/0:7,0:7:12.04:0,12,427	0/0:8,0:8:9.03:0,9,524	0/0:10,0:10:6.02:0,6,344	./.	1/1:11,0:11:6.02:153,6,0	0/0:8,0:8:9.03:0,9,524	0/0:11,0:11:9.03:0,9,523	0/0:11,0:11:6.02:0,6,349	./.	./.	0/0:5,0:6:3.01:0,3,97	1/1:4,3:7:3.01:103,3,0	0/0:2,0:7:18.06:0,18,846	0/0:10,0:14:9.03:0,9,471	./.
chr10	71542198	.	CTGTGTGTGTGTGTGTGTGTG	C	1147.58	PASS	AB=0.890;AC=10;AF=0.185;AN=54;BaseQRankSum=5.872;DP=671;FS=0.000;HRun=0;HaplotypeScore=297.4137;InbreedingCoeff=0.5499;MQ=65.52;MQ0=13;MQRankSum=-3.325;QD=8.38;ReadPosRankSum=1.825;VQSLOD=1.8704;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:45.15:0,45,3173	1/1:7,2:9:3.01:159,3,0	0/0:34,0:27:3.01:0,3,57	0/0:36,0:23:0.47:0,0,1	0/0:18,0:18:18.06:0,18,1336	0/0:18,0:18:0.89:0,1,2	0/0:26,0:24:30.10:0,30,2328	0/0:26,0:24:18.53:0,19,897	0/0:15,0:14:24.08:0,24,1973	1/1:16,5:20:9.01:231,9,0	./.	0/0:22,0:22:24.08:0,24,1599	0/1:18,0:22:87.54:88,0,130	0/0:22,0:21:24.08:0,24,1802	0/0:20,0:27:27.56:0,28,1998	0/0:23,0:29:27.09:0,27,1874	1/1:31,1:30:7.66:200,8,0	0/0:21,0:20:21.07:0,21,808	0/0:29,0:28:20.44:0,20,1232	0/0:18,0:16:12.04:0,12,828	0/0:53,0:53:57.20:0,57,4506	0/0:8,0:8:6.02:0,6,323	0/0:15,0:15:6.02:0,6,115	0/1:22,0:23:50.21:50,0,361	1/1:21,8:29:12.04:565,12,0	0/0:28,0:27:25.44:0,25,1711	0/0:19,0:18:16.58:0,17,811	0/0:13,0:12:15.05:0,15,1314
chr10	71543733	.	T	TTTTA	2213.22	PASS	AC=18;AF=0.391;AN=46;BaseQRankSum=-0.254;DP=270;FS=0.000;HRun=0;HaplotypeScore=45.0873;InbreedingCoeff=0.6778;MQ=64.86;MQ0=0;MQRankSum=-3.172;QD=22.13;ReadPosRankSum=-0.156;VQSLOD=2.9669;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,4:11:12.04:283,12,0	1/1:3,3:5:6.02:142,6,0	./.	./.	0/0:10,0:10:9.03:0,9,140	0/0:9,0:9:18.06:0,18,279	0/0:6,0:6:3.01:0,3,47	0/0:41,0:41:23.28:0,23,314	0/0:2,0:2:3:0,3,26	1/1:0,1:1:3.01:71,3,0	1/1:8,1:10:9.03:208,9,0	0/0:5,0:5:15.04:0,15,210	1/1:3,0:4:3.01:52,3,0	0/0:8,0:8:12.04:0,12,187	0/0:5,0:5:6.02:0,6,94	0/0:6,0:6:3.01:0,3,47	1/1:14,10:26:39.13:910,39,0	1/1:21,0:25:20.28:284,20,0	0/0:21,0:21:33.11:0,33,515	0/0:6,0:6:3.01:0,3,47	./.	./.	1/1:6,0:6:0.47:1,0,0	./.	1/1:5,6:11:18.06:425,18,0	0/0:7,0:7:3.01:0,3,47	0/0:10,0:10:12.04:0,12,187	0/0:19,0:19:27.09:0,27,418
chr10	71543792	.	TG	T	2003.02	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=8.775;DP=311;FS=4.420;HRun=9;HaplotypeScore=41.9517;InbreedingCoeff=0.9658;MQ=77.89;MQ0=0;MQRankSum=-2.352;QD=20.23;ReadPosRankSum=2.836;VQSLOD=3.8898;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:16:35.96:320,36,0	1/1:1,4:5:12:110,12,0	0/0:28,0:17:24.01:0,24,333	0/0:13,0:12:12.97:0,13,121	0/0:10,0:10:21.05:0,21,233	0/0:11,0:11:33.06:0,33,359	0/0:9,0:9:24.05:0,24,257	0/0:19,0:19:39.04:0,39,400	0/0:7,0:7:18.04:0,18,197	1/1:0,6:6:18:161,18,0	1/1:2,4:6:12.01:109,12,0	0/0:6,0:6:15.03:0,15,163	1/1:0,4:5:12.01:110,12,0	0/0:8,0:8:24.05:0,24,259	0/0:7,0:7:15.02:0,15,160	0/0:9,0:9:24.05:0,24,257	1/1:1,18:19:54.03:493,54,0	1/1:2,17:19:45.02:411,45,0	0/0:26,0:26:56.36:0,56,610	0/0:9,0:9:24.07:0,24,277	0/0:7,0:7:21.03:0,21,222	0/0:6,0:6:15.04:0,15,173	1/1:0,8:8:23.85:206,24,0	1/1:0,6:6:15.01:137,15,0	1/1:1,8:9:18.01:164,18,0	0/0:10,0:10:27.08:0,27,312	0/0:17,0:17:45.11:0,45,500	0/0:10,0:10:27.07:0,27,312
chr10	71548489	.	AT	A	558.55	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=4.952;DP=440;FS=4.937;HRun=9;HaplotypeScore=61.0331;InbreedingCoeff=0.8105;MQ=65.59;MQ0=3;MQRankSum=3.160;QD=14.32;ReadPosRankSum=-0.016;VQSLOD=3.6016;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:41.01:0,41,219	0/1:9,0:9:18.52:19,0,84	0/0:5,0:5:15.04:0,15,165	0/0:10,0:10:12.04:0,12,138	0/0:19,0:19:48.14:0,48,554	0/0:25,0:25:60.18:0,60,692	0/0:8,0:8:18.05:0,18,208	0/0:46,0:46:99:0,117,1314	0/0:7,0:7:18.05:0,18,208	0/0:19,0:18:41.65:0,42,209	0/0:24,0:24:65.69:0,66,329	0/0:17,0:17:42.12:0,42,485	1/1:0,11:11:30.02:274,30,0	0/0:9,0:9:24.06:0,24,266	0/0:14,0:14:27.08:0,27,311	0/0:11,0:11:33.10:0,33,381	0/0:22,0:21:24.47:0,24,236	0/0:24,0:24:42.87:0,43,227	0/0:26,0:25:63.19:0,63,727	0/0:10,0:10:21.05:0,21,232	0/0:9,0:9:18.05:0,18,208	0/0:10,0:10:21.06:0,21,242	1/1:1,10:11:30.01:274,30,0	1/1:2,6:8:15.47:138,15,0	0/0:15,0:15:37.24:0,37,192	0/0:23,0:23:66.03:0,66,741	0/0:14,0:14:39.05:0,39,422	0/0:12,0:12:36.11:0,36,415
chr10	71548498	.	T	TTTA	1554.76	PASS	AB=0.516;AC=9;AF=0.161;AN=56;BaseQRankSum=8.554;DP=398;FS=0.573;HRun=0;HaplotypeScore=66.4980;InbreedingCoeff=0.7718;MQ=56.15;MQ0=13;MQRankSum=-2.924;QD=24.29;ReadPosRankSum=-0.003;VQSLOD=3.4653;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:1,0:16:12.13:467,0,12	0/0:8,0:8:22.47:0,22,111	0/0:7,0:5:15.05:0,15,227	0/0:4,0:3:9.03:0,9,146	0/0:21,0:21:48.05:0,48,779	0/0:21,0:21:63.17:0,63,993	0/0:7,0:7:18.06:0,18,292	0/0:45,0:43:99:0,129,1832	0/0:6,0:6:18.06:0,18,290	0/0:18,0:17:1.08:0,1,120	0/0:23,0:23:62.65:0,63,282	0/0:17,0:17:48.08:0,48,721	1/1:12,0:12:19.87:70,20,0	0/0:9,0:9:21.07:0,21,341	0/0:10,0:9:27.09:0,27,436	0/0:12,0:12:33.11:0,33,535	0/0:16,0:15:42.57:0,43,229	1/1:1,17:18:48.16:1091,48,0	0/0:24,0:22:66.19:0,66,1010	0/0:7,0:7:18.06:0,18,292	0/0:7,0:6:18.06:0,18,292	0/0:7,0:7:21.07:0,21,341	1/1:11,0:11:9.24:37,9,0	1/1:6,0:6:11.74:46,12,0	0/0:14,0:14:20.67:0,21,148	0/0:23,0:24:18.06:0,18,989	0/0:14,0:14:38.98:0,39,571	0/0:13,0:12:36.12:0,36,585
chr10	71550381	.	A	ATATG	473.32	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.159;DP=793;FS=0.000;HRun=0;HaplotypeScore=144.9757;InbreedingCoeff=0.9638;MQ=66.35;MQ0=1;MQRankSum=-1.381;QD=7.51;ReadPosRankSum=-1.524;VQSLOD=2.7074;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,21:37:8.70:222,9,0	0/0:17,0:17:51.17:0,51,953	0/0:17,0:16:31.88:0,32,479	0/0:39,0:26:45.81:0,46,585	0/0:34,0:34:93.28:0,93,1674	0/0:22,0:22:66.20:0,66,1171	0/0:23,0:23:66.21:0,66,1231	0/0:44,0:44:99:0,126,2059	0/0:26,0:26:78.21:0,78,1388	0/0:28,0:28:84.24:0,84,1509	0/0:31,0:31:84.25:0,84,1480	0/0:40,0:40:99:0,117,2011	0/0:27,0:27:75.26:0,75,1346	0/0:22,0:22:63.20:0,63,1147	0/0:36,0:36:99:0,102,1894	0/0:26,0:26:75.23:0,75,1302	0/0:24,0:24:69.19:0,69,1230	1/1:4,17:26:19.79:364,20,0	0/0:14,0:13:36.09:0,36,574	0/0:32,0:32:87.24:0,87,1619	0/0:30,0:30:87.30:0,87,1589	0/0:26,0:26:78.25:0,78,1428	0/0:22,0:22:66.23:0,66,1199	0/0:26,0:26:78.27:0,78,1484	0/0:39,0:38:99:0,108,1795	0/0:32,0:32:93.22:0,93,1609	0/0:36,0:36:99:0,108,1744	0/0:17,0:17:45.15:0,45,870
chr10	71551901	.	CA	C	1300.65	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.371;DP=642;FS=1.277;HRun=1;HaplotypeScore=76.8691;InbreedingCoeff=0.9996;MQ=86.22;MQ0=0;MQRankSum=-4.859;QD=30.97;ReadPosRankSum=0.622;VQSLOD=3.3534;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:66.14:819,66,0	0/0:15,0:15:45.15:0,45,715	0/0:23,0:24:55.73:0,56,906	0/0:23,0:24:58:0,58,867	0/0:29,0:29:81.19:0,81,1241	0/0:26,0:26:78.25:0,78,1224	0/0:16,0:17:51.05:0,51,759	0/0:43,0:43:99:0,123,1927	0/0:17,0:17:48.15:0,48,738	0/0:25,0:25:75.25:0,75,1178	0/0:24,0:24:60.20:0,60,958	0/0:26,0:26:75.21:0,75,1125	0/0:14,0:14:42.13:0,42,648	0/0:12,0:12:36.12:0,36,573	0/0:24,0:24:72.23:0,72,1126	0/0:34,0:34:99:0,99,1557	0/0:33,0:33:99:0,99,1579	1/1:1,18:19:48.11:604,48,0	0/0:11,0:11:30.08:0,30,435	0/0:22,0:22:66.22:0,66,1045	0/0:16,0:16:48.16:0,48,767	0/0:18,0:18:54.17:0,54,833	0/0:19,0:19:54.16:0,54,838	0/0:31,0:31:93.28:0,93,1437	0/0:14,0:14:42.12:0,42,646	0/0:28,0:28:84.28:0,84,1322	0/0:28,0:28:84.29:0,84,1342	0/0:26,0:26:69.20:0,69,1054
chr10	71551941	.	CT	C	544.26	PASS	AB=0.881;AC=9;AF=0.161;AN=56;BaseQRankSum=9.238;DP=638;FS=5.722;HRun=13;HaplotypeScore=86.9923;InbreedingCoeff=0.2454;MQ=78.38;MQ0=1;MQRankSum=-1.503;QD=3.53;ReadPosRankSum=1.763;VQSLOD=0.9498;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,14:26:28.61:348,29,0	0/0:11,1:12:8.14:0,8,241	0/1:25,1:21:34.49:34,0,70	0/0:21,0:16:12.51:0,13,105	0/0:23,3:27:16.85:0,17,428	0/1:20,3:25:15.66:16,0,343	0/1:14,2:17:8.59:9,0,280	0/0:25,3:29:0:0,0,436	0/1:10,1:12:7.72:8,0,126	0/0:27,2:30:38.02:0,38,515	0/0:18,2:20:8.11:0,8,231	0/0:16,3:20:25.91:0,26,377	0/0:22,1:25:10.03:0,10,396	0/0:16,1:18:1.74:0,2,289	0/0:25,1:26:13.41:0,13,433	0/0:25,2:31:39.92:0,40,662	0/0:31,0:33:64.34:0,64,666	1/1:6,12:20:37.74:268,38,0	0/0:18,1:20:18.67:0,19,320	0/0:21,1:23:4.29:0,4,231	0/0:18,0:18:42.02:0,42,392	0/0:19,1:20:25.05:0,25,385	0/0:19,1:21:6.78:0,7,257	0/0:23,1:24:29.19:0,29,427	0/0:17,1:18:23.62:0,24,374	0/0:24,3:27:18.42:0,18,305	0/1:24,4:28:2.74:3,0,434	0/0:18,1:20:7.28:0,7,258
chr10	71552813	.	T	TAA	1393.04	PASS	AB=0.984;AC=9;AF=0.161;AN=56;BaseQRankSum=1.260;DP=578;FS=9.994;HRun=12;HaplotypeScore=85.5618;InbreedingCoeff=0.6592;MQ=71.78;MQ0=0;MQRankSum=0.610;QD=11.33;ReadPosRankSum=-1.472;VQSLOD=1.2066;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:75.01:0,75,693	0/0:9,0:10:23.74:0,24,206	0/1:14,0:16:22.18:22,0,44	0/1:15,0:13:8.44:8,0,40	0/0:22,0:22:44.62:0,45,400	0/0:21,0:22:44.62:0,45,390	0/0:18,0:18:41.95:0,42,381	0/0:21,0:24:47.56:0,48,475	0/0:21,0:22:59.79:0,60,539	0/0:25,0:27:50.39:0,50,440	0/0:9,0:10:26.88:0,27,237	0/0:27,0:27:62.92:0,63,583	1/1:5,26:34:47.60:618,48,0	0/0:14,0:16:35.38:0,35,287	0/0:27,0:30:44.37:0,44,487	0/0:23,0:25:53.58:0,54,530	0/0:28,0:28:61.23:0,61,580	0/0:16,0:16:35.98:0,36,333	0/0:14,0:18:35.08:0,35,330	0/0:16,0:19:22.18:0,22,234	0/0:19,0:20:53.78:0,54,484	0/0:15,0:15:33:0,33,305	1/1:1,8:12:18.52:222,19,0	1/1:5,19:24:48.15:673,48,0	0/0:22,0:22:59.99:0,60,542	0/1:19,1:20:0.11:0,0,318	0/0:25,0:24:53.82:0,54,490	0/0:5,0:6:14.71:0,15,123
chr10	71554462	.	CAT	C	321.71	PASS	AB=0.905;AC=13;AF=0.325;AN=40;BaseQRankSum=1.344;DP=233;FS=0.000;HRun=0;HaplotypeScore=45.3968;InbreedingCoeff=0.1074;MQ=80.17;MQ0=0;MQRankSum=-0.530;QD=3.22;ReadPosRankSum=0.607;VQSLOD=1.4074;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:12:3.78:15,4,0	1/1:0,1:1:3.01:35,3,0	./.	./.	0/1:11,1:12:17.96:29,0,18	0/1:3,0:3:0.26:0,0,62	0/0:4,0:4:3.01:0,3,38	0/1:23,0:23:7.77:8,0,559	0/0:3,0:3:3.01:0,3,47	1/1:6,0:7:5.85:49,6,0	./.	0/0:5,0:6:9.02:0,9,115	0/0:5,0:8:6:0,6,53	0/0:7,0:7:6.02:0,6,89	./.	0/0:6,0:6:3.01:0,3,47	0/1:17,6:26:23.09:178,0,23	0/0:9,0:10:11.66:0,12,58	./.	0/0:3,0:3:3:0,3,25	./.	./.	0/0:5,0:6:3:0,3,26	./.	1/1:3,1:4:6.02:70,6,0	0/0:6,0:6:2.96:0,3,19	0/0:7,0:7:6.02:0,6,94	0/1:8,1:12:60.51:61,0,115
chr10	71554473	.	A	AC	87.72	PASS	AB=1.000;AC=5;AF=0.096;AN=52;BaseQRankSum=3.741;DP=192;FS=0.000;HRun=0;HaplotypeScore=44.0806;InbreedingCoeff=0.3339;MQ=73.62;MQ0=5;MQRankSum=-0.088;QD=1.59;ReadPosRankSum=-1.988;VQSLOD=0.9489;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,4:10:15.17:173,15,0	0/0:1,0:1:2.90:0,3,16	1/1:13,0:3:2.50:9,2,0	0/1:32,0:11:0.92:1,0,80	0/0:3,0:3:8.92:0,9,100	0/0:4,0:4:9.03:0,9,123	0/0:1,0:1:3.01:0,3,42	0/0:29,0:29:84.18:0,84,1119	0/0:1,0:1:3.01:0,3,42	0/0:4,0:4:8.74:0,9,56	./.	0/0:3,0:3:9.01:0,9,107	0/0:5,0:5:5.91:0,6,41	0/0:3,0:3:9.03:0,9,125	0/0:4,0:4:12.04:0,12,166	0/0:4,0:4:9.03:0,9,125	0/0:23,0:23:47.31:0,47,482	0/0:12,0:11:14.30:0,14,129	0/0:7,0:6:12.04:0,12,165	0/0:3,0:3:9.03:0,9,125	./.	0/0:1,0:1:3.01:0,3,41	0/0:4,0:4:12:0,12,130	0/0:2,0:2:3.01:0,3,41	0/0:7,0:7:14.83:0,15,157	0/0:1,0:1:3.01:0,3,42	0/0:5,0:5:11.83:0,12,167	0/0:10,0:10:29.72:0,30,302
chr10	71554490	.	CACTATATA	C	339.77	PASS	AB=1.000;AC=8;AF=0.174;AN=46;BaseQRankSum=3.135;DP=236;FS=4.136;HRun=0;HaplotypeScore=70.8447;InbreedingCoeff=0.3926;MQ=75.16;MQ0=10;MQRankSum=-1.837;QD=11.33;ReadPosRankSum=0.508;VQSLOD=1.5131;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,6:8:6.02:162,6,0	1/1:1,0:1:2.60:10,3,0	0/0:36,0:12:5.51:0,6,47	0/0:58,0:17:14.98:0,15,128	0/1:2,0:2:4.20:4,0,40	0/0:5,0:5:12.04:0,12,422	0/0:2,0:2:6.02:0,6,139	0/0:37,0:37:99:0,108,3020	0/0:1,0:1:3.01:0,3,139	0/0:5,0:5:11.90:0,12,160	./.	0/0:4,0:4:12.04:0,12,505	0/0:5,0:5:6.02:0,6,74	0/0:3,0:3:8.98:0,9,179	./.	0/0:3,0:3:6.02:0,6,175	0/0:20,0:20:15.64:0,16,485	1/1:10,2:11:13.16:274,13,0	0/0:4,0:3:9.03:0,9,271	0/0:2,0:2:3.01:0,3,139	./.	./.	0/0:1,0:1:3.01:0,3,37	./.	0/1:7,0:7:1.22:1,0,77	0/0:2,0:2:6.02:0,6,226	0/0:3,0:3:9.03:0,9,386	0/0:12,0:12:36.12:0,36,1183
chr10	71554492	.	CTA	C	393.29	PASS	AB=0.867;AC=11;AF=0.289;AN=38;BaseQRankSum=2.260;DP=246;FS=3.625;HRun=0;HaplotypeScore=54.8805;InbreedingCoeff=0.2698;MQ=75.52;MQ0=10;MQRankSum=-1.371;QD=6.78;ReadPosRankSum=0.537;VQSLOD=2.5914;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:5.68:28,6,0	./.	0/0:37,1:12:5.52:0,6,25	0/0:67,0:20:12.35:0,12,131	./.	0/0:5,0:5:9.03:0,9,146	0/1:1,2:3:37.20:64,0,37	0/0:36,0:38:38.58:0,39,1102	0/0:1,0:1:3.01:0,3,49	1/1:2,3:5:9.03:110,9,0	./.	0/0:4,0:4:12.04:0,12,179	./.	0/0:3,0:3:3.01:0,3,49	./.	0/0:3,0:3:3.01:0,3,49	1/1:12,7:19:17.83:219,18,0	0/0:12,0:11:0.78:0,1,39	0/1:4,0:3:27.72:28,0,56	0/0:1,0:1:3.01:0,3,49	./.	./.	./.	./.	1/1:3,4:7:3.01:37,3,0	0/0:2,0:2:6.02:0,6,82	0/0:3,0:3:9.03:0,9,145	0/1:12,0:12:36.56:37,0,410
chr10	71554498	.	A	ATATATAC	613.94	PASS	AC=4;AF=0.100;AN=40;BaseQRankSum=2.446;DP=246;FS=3.031;HRun=0;HaplotypeScore=72.6695;InbreedingCoeff=0.4847;MQ=73.28;MQ0=11;MQRankSum=-2.842;QD=26.69;ReadPosRankSum=0.947;VQSLOD=2.7080;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:6.02:138,6,0	./.	0/0:41,0:12:4.87:0,5,43	0/0:69,0:18:14.68:0,15,162	./.	0/0:5,0:5:12.04:0,12,268	0/0:3,0:3:9.03:0,9,156	0/0:35,0:35:81.28:0,81,1860	0/0:1,0:1:3.01:0,3,76	0/0:5,0:5:12.03:0,12,180	./.	0/0:4,0:4:12.04:0,12,301	0/0:5,0:5:0.47:0,0,1	0/0:3,0:3:3.01:0,3,76	./.	0/0:1,0:1:3.01:0,3,76	0/0:19,0:19:35.50:0,36,540	1/1:7,4:14:20.60:578,21,0	0/0:4,0:3:9.03:0,9,203	0/0:1,0:1:3.01:0,3,76	./.	./.	./.	./.	0/0:7,0:7:6.02:0,6,88	0/0:2,0:2:6.02:0,6,120	0/0:3,0:3:9.03:0,9,226	0/0:12,0:12:36.12:0,36,821
chr10	71554520	.	G	GTA	898.19	PASS	AB=1.000;AC=12;AF=0.240;AN=50;BaseQRankSum=0.813;DP=263;FS=0.000;HRun=0;HaplotypeScore=43.7177;InbreedingCoeff=0.6014;MQ=67.14;MQ0=7;MQRankSum=-0.644;QD=13.21;ReadPosRankSum=1.498;VQSLOD=2.7368;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:15.05:0,15,187	1/1:0,1:1:3.01:50,3,0	0/1:29,0:8:0.01:0,0,0	0/0:49,0:16:0.91:0,1,20	0/0:1,0:1:3.01:0,3,37	0/0:7,0:7:12.04:0,12,150	0/0:4,0:4:12.04:0,12,150	0/0:43,0:43:99:0,102,1254	0/0:3,0:3:9.03:0,9,112	1/1:0,5:5:15.05:247,15,0	1/1:0,4:4:6.02:99,6,0	0/0:10,0:10:27.07:0,27,325	0/0:3,0:3:6.02:0,6,75	0/0:3,0:3:9.03:0,9,112	0/0:3,0:3:9.03:0,9,113	0/0:6,0:6:18.06:0,18,225	1/1:3,15:18:36.12:593,36,0	0/0:18,0:17:20.67:0,21,227	0/0:6,0:6:15.05:0,15,188	0/0:4,0:4:9.03:0,9,112	./.	./.	0/0:1,0:1:3.01:0,3,37	./.	1/1:1,6:7:3.01:50,3,0	0/1:4,0:4:0.71:1,0,101	0/0:5,0:5:15.04:0,15,178	0/0:15,0:15:42.08:0,42,493
chr10	71556130	.	T	TG	566.57	PASS	AB=0.847;AC=15;AF=0.278;AN=54;BaseQRankSum=-1.168;DP=304;FS=4.900;HRun=10;HaplotypeScore=55.5529;InbreedingCoeff=0.1445;MQ=71.70;MQ0=0;MQRankSum=2.614;QD=4.76;ReadPosRankSum=0.007;VQSLOD=0.5167;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:9,9:18:14.94:111,0,15	0/1:5,0:5:15.63:48,0,16	0/0:6,0:6:6.19:0,6,49	0/1:10,0:10:13.14:30,0,13	0/0:3,0:3:5.97:0,6,48	0/0:7,0:7:5.98:0,6,49	0/0:23,0:26:60.05:0,60,461	0/0:11,0:11:5.92:0,6,43	0/0:8,0:9:23:0,23,178	0/1:8,0:8:18.50:26,0,18	1/1:4,0:4:2.90:16,3,0	0/0:23,0:23:41.43:0,41,328	0/1:4,1:8:0.02:0,0,0	0/0:13,0:13:14.90:0,15,121	0/0:8,0:8:17.96:0,18,147	0/0:7,0:8:17.01:0,17,129	0/1:7,8:15:9.61:113,0,10	0/1:9,12:21:37.81:252,0,38	0/1:10,0:10:2.07:2,0,82	0/1:2,0:2:0:0,0,0	0/0:45,0:48:71.19:0,71,560	0/0:5,0:6:8:0,8,55	./.	1/1:5,4:11:8.89:79,9,0	1/1:6,1:7:3.01:32,3,0	0/0:8,0:8:4.78:0,5,68	0/0:4,0:4:5.98:0,6,46	0/0:5,0:5:5.98:0,6,49
chr10	71559303	.	C	CCTT	1356.72	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.817;DP=602;FS=0.000;HRun=0;HaplotypeScore=80.2869;InbreedingCoeff=0.9689;MQ=77.71;MQ0=0;MQRankSum=-3.403;QD=50.25;ReadPosRankSum=0.175;VQSLOD=5.1790;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:63.15:1299,63,0	0/0:14,0:14:39.13:0,39,627	0/0:12,0:12:33.11:0,33,510	0/0:14,0:14:36.12:0,36,567	0/0:35,0:35:99:0,102,1634	0/0:28,0:28:81.28:0,81,1294	0/0:19,0:19:57.18:0,57,892	0/0:38,0:38:99:0,99,1547	0/0:15,0:15:39.13:0,39,623	0/0:24,0:24:66.22:0,66,1061	0/0:19,0:19:54.18:0,54,867	0/0:20,0:20:54.18:0,54,866	0/0:26,0:26:69.23:0,69,1099	0/0:32,0:32:84.27:0,84,1321	0/0:23,0:23:63.19:0,63,965	0/0:24,0:24:66.21:0,66,1016	0/0:36,0:36:99:0,102,1633	1/1:0,3:3:9.03:172,9,0	0/0:17,0:17:51.17:0,51,815	0/0:25,0:25:66.22:0,66,1051	0/0:25,0:25:66.22:0,66,1061	0/0:14,0:14:42.13:0,42,652	0/0:13,0:13:36.12:0,36,576	0/0:12,0:12:36.12:0,36,579	0/0:17,0:17:51.17:0,51,818	0/0:29,0:29:81.24:0,81,1231	0/0:27,0:27:78.25:0,78,1229	0/0:17,0:17:51.13:0,51,748
chr10	71560632	.	G	GC	4943.70	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-12.946;DP=616;FS=2.291;HRun=1;HaplotypeScore=57.3317;InbreedingCoeff=0.9791;MQ=82.65;MQ0=0;MQRankSum=-1.069;QD=42.62;ReadPosRankSum=2.564;VQSLOD=5.3122;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.17:0,51,662	1/1:1,3:4:9.03:135,9,0	0/0:22,0:22:66.18:0,66,818	0/0:13,0:13:39.08:0,39,473	0/0:31,0:31:93.30:0,93,1207	0/0:22,0:22:66.21:0,66,857	0/0:18,0:18:54.18:0,54,700	0/0:38,0:38:99:0,108,1390	0/0:19,0:19:57.19:0,57,740	1/1:0,34:34:99:1527,102,0	1/1:0,22:22:63.21:944,63,0	0/0:23,0:23:69.21:0,69,883	0/0:20,0:20:60.20:0,60,779	0/0:18,0:18:51.17:0,51,661	0/0:23,0:23:66.21:0,66,856	0/0:27,0:27:75.23:0,75,959	1/1:1,25:26:72.24:1079,72,0	0/0:19,0:19:48.16:0,48,623	0/0:28,0:28:84.23:0,84,1038	0/0:31,0:31:93.29:0,93,1192	0/0:4,0:4:12.04:0,12,156	0/0:15,0:15:45.15:0,45,583	0/0:23,0:23:69.22:0,69,896	0/0:10,0:10:30.08:0,30,373	1/1:0,30:30:84.28:1259,84,0	0/0:32,0:32:96.30:0,96,1222	0/0:32,0:32:96.31:0,96,1246	0/0:13,0:13:39.13:0,39,506
chr10	71562191	.	G	GTTGT	1564.49	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.412;DP=739;FS=2.575;HRun=0;HaplotypeScore=115.2147;InbreedingCoeff=0.8983;MQ=73.98;MQ0=0;MQRankSum=-1.848;QD=46.01;ReadPosRankSum=-0.204;VQSLOD=4.3501;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,17:24:7.08:1230,7,0	0/0:6,0:6:15.04:0,15,227	0/0:34,0:32:42.13:0,42,663	0/0:19,0:19:33.11:0,33,532	0/0:35,0:35:87.30:0,87,1447	0/0:26,0:26:66.23:0,66,1100	0/0:18,0:18:6.99:0,7,494	0/0:39,0:39:78.26:0,78,1284	0/0:25,0:25:63.22:0,63,1050	0/0:20,0:20:51.17:0,51,853	0/0:28,0:28:72.25:0,72,1201	0/0:24,0:24:51.17:0,51,849	0/0:30,0:30:69.22:0,69,1124	0/0:30,0:30:69.19:0,69,1111	0/0:38,0:38:96.32:0,96,1577	0/0:39,0:39:99:0,105,1753	0/0:42,0:42:99:0,105,1749	1/1:3,6:10:18.06:445,18,0	0/0:20,0:20:33.11:0,33,550	0/0:28,0:28:69.24:0,69,1150	0/0:28,0:28:63.19:0,63,1025	0/0:23,0:23:57.19:0,57,952	0/0:28,0:28:66.23:0,66,1100	0/0:16,0:16:33.07:0,33,518	0/0:23,0:23:60.21:0,60,998	0/0:34,0:35:84.27:0,84,1357	0/0:38,0:37:99:0,105,1740	0/0:13,0:13:27.09:0,27,452
chr10	71562279	.	TTTACAC	T	1068.55	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.648;DP=680;FS=3.243;HRun=0;HaplotypeScore=134.9959;InbreedingCoeff=0.9903;MQ=78.86;MQ0=0;MQRankSum=-7.205;QD=39.58;ReadPosRankSum=0.771;VQSLOD=3.5509;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:21:36.12:837,36,0	0/0:11,0:11:33.11:0,33,1166	0/0:16,0:15:39.13:0,39,1265	0/0:17,0:17:42.14:0,42,1264	0/0:35,0:35:99:0,102,3517	0/0:22,0:22:63.22:0,63,2223	0/0:17,0:17:42.14:0,42,1365	0/0:31,0:31:78.27:0,78,2567	0/0:20,0:20:57.20:0,57,2008	0/0:28,0:28:81.28:0,81,2863	0/0:21,0:21:54.19:0,54,1884	0/0:33,0:33:96.33:0,96,3323	0/0:34,0:34:99:0,102,3419	0/0:46,0:46:99:0,123,4224	0/0:29,0:29:84.29:0,84,2892	0/0:35,0:35:99:0,99,3137	0/0:25,0:25:66.20:0,66,2181	1/1:0,6:6:15.05:350,15,0	0/0:10,0:10:27.09:0,27,954	0/0:35,0:35:96.32:0,96,3184	0/0:23,0:23:63.22:0,63,2162	0/0:19,0:19:54.19:0,54,1880	0/0:20,0:20:57.20:0,57,1993	0/0:20,0:20:60.21:0,60,2119	0/0:23,0:23:63.20:0,63,2089	0/0:35,1:36:26.38:0,26,3163	0/0:35,0:35:99:0,99,3409	0/0:12,0:12:36.10:0,36,1079
chr10	71563972	.	CTTTA	C	196.97	PASS	AC=4;AF=0.080;AN=50;BaseQRankSum=4.151;DP=292;FS=10.111;HRun=0;HaplotypeScore=45.2152;InbreedingCoeff=0.6058;MQ=67.14;MQ0=0;MQRankSum=-0.954;QD=13.13;ReadPosRankSum=0.696;VQSLOD=1.1864;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:34.86:0,35,880	0/0:3,0:3:3.01:0,3,74	0/0:7,0:6:3.01:0,3,74	./.	0/0:13,0:13:30.09:0,30,686	0/0:10,0:10:14.97:0,15,263	0/0:6,0:5:9.03:0,9,221	0/0:34,0:34:78.25:0,78,1805	0/0:8,0:8:15.05:0,15,368	0/0:10,0:10:21.07:0,21,489	0/0:9,0:9:15.04:0,15,319	0/0:7,0:7:21.07:0,21,515	1/1:4,7:11:15.05:250,15,0	0/0:9,0:9:12.04:0,12,276	0/0:6,0:6:9.03:0,9,221	0/0:11,0:11:15.05:0,15,368	0/0:29,0:29:66.20:0,66,1439	0/0:18,0:18:36.12:0,36,883	0/0:20,0:21:33.03:0,33,703	0/0:7,0:7:9.01:0,9,142	0/0:2,0:2:6.02:0,6,147	./.	./.	1/1:2,2:4:3.01:50,3,0	0/0:13,0:13:21.07:0,21,509	0/0:8,0:8:21.06:0,21,469	0/0:17,0:17:27.07:0,27,606	0/0:8,0:8:18.06:0,18,441
chr10	71564946	.	G	GT	2181.55	PASS	AB=0.804;AC=16;AF=0.286;AN=56;BaseQRankSum=10.333;DP=617;FS=1.401;HRun=4;HaplotypeScore=84.9352;InbreedingCoeff=0.7649;MQ=70.57;MQ0=5;MQRankSum=-1.038;QD=13.22;ReadPosRankSum=-1.165;VQSLOD=1.9808;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:22.89:0,23,61	1/1:1,1:2:3.48:34,3,0	0/0:40,0:22:19.19:0,19,327	0/0:42,0:23:0.55:0,1,265	0/0:25,0:25:65.92:0,66,726	0/0:19,0:19:54.14:0,54,602	0/0:11,0:11:33.09:0,33,369	0/0:19,0:19:54.15:0,54,604	0/0:11,0:11:30.08:0,30,340	1/1:13,28:42:48.78:704,49,0	1/1:5,14:21:35.63:353,36,0	0/0:16,0:16:45.13:0,45,510	0/1:6,11:17:4.29:198,0,4	0/0:26,0:26:69.67:0,70,783	0/0:36,0:36:99:0,102,1138	0/0:26,0:26:72.20:0,72,813	1/1:12,12:24:8.38:436,8,0	0/1:18,0:18:16.41:16,0,44	0/0:20,0:19:42.51:0,43,468	0/0:30,0:30:90.24:0,90,1010	0/0:9,0:9:27.08:0,27,306	0/0:12,0:12:30.08:0,30,340	1/1:4,11:16:18.18:290,18,0	1/1:1,7:8:12.50:132,13,0	1/1:5,11:17:20.89:209,21,0	0/0:29,1:30:45.47:0,45,817	0/0:30,0:30:83.81:0,84,917	0/0:29,0:29:75.16:0,75,818
chr10	71564947	.	TTTTG	T	1390.55	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=6.236;DP=615;FS=0.498;HRun=0;HaplotypeScore=119.8943;InbreedingCoeff=0.3380;MQ=70.60;MQ0=5;MQRankSum=-5.429;QD=8.86;ReadPosRankSum=-5.454;VQSLOD=0.7449;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,10:20:44.78:689,45,0	0/0:2,0:2:5.96:0,6,44	0/0:40,0:22:36.84:0,37,426	0/0:43,0:23:13.94:0,14,397	0/0:25,0:25:69.21:0,69,1591	0/0:19,0:19:57.15:0,57,1226	0/0:12,0:12:36.08:0,36,702	0/0:20,0:20:57.12:0,57,1039	0/0:12,0:12:33.05:0,33,579	0/1:41,0:41:99:118,0,473	0/1:21,0:21:30.97:31,0,242	0/0:15,0:15:45.13:0,45,984	0/1:17,0:17:3.44:3,0,213	0/0:26,0:26:72.16:0,72,1567	0/0:35,0:35:99:0,102,2125	0/0:26,0:26:72.20:0,72,1529	0/1:24,0:24:99:100,0,290	1/1:13,6:19:23.52:558,24,0	0/0:20,0:19:29.99:0,30,787	0/0:30,0:30:90.21:0,90,1822	0/0:9,0:9:27.06:0,27,549	0/0:11,0:11:30.10:0,30,749	0/1:15,0:15:40.25:40,0,153	0/0:8,0:8:14.85:0,15,111	0/0:15,0:15:15.98:0,16,151	0/0:30,0:30:74.21:0,74,1765	0/0:31,0:31:90.22:0,90,1851	0/0:29,0:29:75.09:0,75,1413
chr10	71564950	.	TG	T	2265.89	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.450;DP=597;FS=0.360;HRun=1;HaplotypeScore=81.3279;InbreedingCoeff=0.8963;MQ=70.98;MQ0=5;MQRankSum=-2.055;QD=12.80;ReadPosRankSum=-2.634;VQSLOD=1.3851;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:3.74:159,4,0	1/1:2,0:2:3.43:20,3,0	0/0:38,2:22:4.88:0,5,253	0/0:43,0:23:18.68:0,19,284	0/0:24,0:24:47.83:0,48,829	0/0:20,0:20:60.16:0,60,744	0/0:12,0:12:36:0,36,408	0/0:19,0:19:57.17:0,57,712	0/0:11,0:11:33.09:0,33,411	1/1:37,4:41:98.85:734,99,0	1/1:19,1:20:51.52:354,52,0	0/0:15,0:15:45.12:0,45,552	1/1:17,0:17:29.78:210,30,0	0/0:24,0:24:70.08:0,70,863	0/0:34,0:34:99:0,102,1278	0/0:25,0:25:72.14:0,72,884	1/1:21,0:21:50.64:302,51,0	1/1:18,0:20:2.05:167,2,0	0/0:19,0:18:16.99:0,17,497	0/0:31,0:31:93.26:0,93,1156	0/0:9,0:9:27.05:0,27,319	0/0:11,0:11:30.09:0,30,388	1/1:15,1:16:38.58:259,39,0	1/1:8,0:8:14.83:102,15,0	1/1:14,0:14:25.28:162,25,0	0/0:27,0:27:57.91:0,58,950	0/0:30,0:30:90.08:0,90,1076	0/0:26,0:26:75.11:0,75,857
chr10	71564951	.	G	GT	2584.82	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=12.342;DP=601;FS=1.335;HRun=9;HaplotypeScore=80.3463;InbreedingCoeff=0.8906;MQ=71.04;MQ0=5;MQRankSum=-3.163;QD=14.44;ReadPosRankSum=-3.028;VQSLOD=3.3140;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,5:18:18.03:199,18,0	1/1:2,0:2:3.48:34,3,0	0/0:40,0:22:24.95:0,25,208	0/0:42,0:24:16.83:0,17,176	0/0:24,0:24:11.59:0,12,489	0/0:19,0:19:56.96:0,57,489	0/0:12,0:12:29.99:0,30,260	0/0:20,0:20:53.98:0,54,469	0/0:11,0:11:32.99:0,33,286	1/1:41,0:41:46.71:703,47,0	1/1:20,0:20:38.83:363,39,0	0/0:15,0:15:38.99:0,39,338	0/1:17,0:17:5.08:200,0,5	0/0:24,0:24:63.46:0,63,548	0/0:35,0:35:62.82:0,63,774	0/0:25,0:25:65.95:0,66,568	1/1:23,0:23:9.88:436,10,0	1/1:16,4:20:19.35:202,19,0	0/0:19,0:18:35.85:0,36,312	0/0:31,0:31:83.93:0,84,722	0/0:10,0:10:20.98:0,21,182	0/0:10,0:10:29.92:0,30,252	1/1:16,0:16:21.07:314,21,0	1/1:8,0:8:12.03:131,12,0	1/1:14,0:14:20.92:210,21,0	0/0:28,0:28:41.89:0,42,589	0/0:29,1:30:47.78:0,48,639	0/0:23,0:23:53.99:0,54,469
chr10	71564996	.	TA	T	403.89	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.724;DP=526;FS=0.888;HRun=8;HaplotypeScore=60.2760;InbreedingCoeff=0.8707;MQ=70.76;MQ0=0;MQRankSum=-4.853;QD=14.42;ReadPosRankSum=0.317;VQSLOD=3.4404;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:17:35.89:321,36,0	0/0:5,0:5:15.05:0,15,181	0/0:12,0:11:12.04:0,12,104	0/0:8,0:6:5.61:0,6,46	0/0:27,0:27:72.22:0,72,869	0/0:25,0:25:72.20:0,72,857	0/0:3,0:3:9.03:0,9,109	0/0:24,0:24:66.20:0,66,797	0/0:18,0:18:54.11:0,54,612	0/0:26,0:26:72.21:0,72,860	0/0:25,0:25:69.20:0,69,820	0/0:12,0:12:33.09:0,33,387	0/0:29,0:29:75.23:0,75,905	0/0:18,0:18:54.17:0,54,652	0/0:29,0:29:78.23:0,78,933	0/0:27,0:27:78.20:0,78,900	0/0:21,0:21:60.17:0,60,712	1/1:1,10:11:21.03:203,21,0	0/0:18,0:18:48.12:0,48,556	0/0:28,0:28:78.23:0,78,932	0/0:13,0:13:36.11:0,36,435	0/0:19,0:19:51.14:0,51,605	0/0:17,0:17:51.16:0,51,616	0/0:3,0:3:9.03:0,9,108	0/0:12,0:12:33.10:0,33,399	0/0:31,0:31:81.24:0,81,969	0/0:38,0:38:99:0,105,1245	0/0:10,0:10:30.09:0,30,362
chr10	71565952	.	AT	A	1182.81	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.651;DP=513;FS=7.380;HRun=5;HaplotypeScore=47.4911;InbreedingCoeff=0.9759;MQ=73.90;MQ0=0;MQRankSum=-3.802;QD=26.28;ReadPosRankSum=1.889;VQSLOD=3.0667;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:45.13:510,45,0	0/0:8,0:8:21.06:0,21,273	0/0:7,0:7:21.07:0,21,281	0/0:11,0:12:24.08:0,24,327	0/0:30,0:30:90.28:0,90,1201	0/0:23,0:23:63.19:0,63,833	0/0:10,0:10:24.08:0,24,328	0/0:35,0:35:99:0,99,1341	0/0:22,0:22:60.16:0,60,773	0/0:16,0:16:45.15:0,45,612	0/0:16,0:16:45.15:0,45,616	0/0:16,0:16:45.10:0,45,565	0/0:24,0:24:69.23:0,69,943	0/0:21,0:21:63.18:0,63,829	0/0:22,0:22:60.20:0,60,820	0/0:23,0:23:66.22:0,66,902	0/0:25,0:25:72.13:0,72,939	1/1:2,24:26:69.15:794,69,0	0/0:14,0:14:33.10:0,33,437	0/0:13,0:13:39.13:0,39,534	0/0:8,0:8:24.08:0,24,328	0/0:15,0:15:33.10:0,33,435	0/0:4,0:4:12.04:0,12,164	0/0:8,0:8:24.08:0,24,328	0/0:25,0:25:72.24:0,72,985	0/0:24,0:24:66.21:0,66,890	0/0:34,0:34:90.30:0,90,1231	0/0:13,0:13:39.13:0,39,533
chr10	71566942	.	GAAT	G	960.41	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.250;DP=709;FS=0.000;HRun=0;HaplotypeScore=100.2034;InbreedingCoeff=0.9922;MQ=93.89;MQ0=0;MQRankSum=-5.093;QD=40.02;ReadPosRankSum=2.533;VQSLOD=4.7348;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:19.27:578,19,0	0/0:6,0:6:18.06:0,18,444	0/0:34,0:34:95.95:0,96,2259	0/0:31,0:31:85.50:0,86,1794	0/0:40,0:40:99:0,120,2945	0/0:28,0:28:84.29:0,84,2048	0/0:18,0:18:54.19:0,54,1317	0/0:29,0:29:87.30:0,87,2144	0/0:26,0:26:78.27:0,78,1923	0/0:37,0:37:99:0,111,2717	0/0:21,0:21:63.22:0,63,1527	0/0:28,0:28:84.29:0,84,2045	0/0:26,0:26:78.27:0,78,1922	0/0:31,0:31:93.32:0,93,2293	0/0:31,0:31:93.32:0,93,2250	0/0:23,0:23:69.22:0,69,1652	0/0:25,0:24:75.26:0,75,1799	1/1:0,10:10:27.09:502,27,0	0/0:21,0:21:63.22:0,63,1554	0/0:34,0:34:99:0,102,2501	0/0:21,0:21:63.22:0,63,1534	0/0:21,0:21:63.22:0,63,1552	0/0:20,0:20:60.21:0,60,1478	0/0:35,0:35:99:0,99,2425	0/0:23,0:23:69.24:0,69,1701	0/0:32,0:32:96.32:0,96,2319	0/0:28,0:28:84.29:0,84,2070	0/0:16,0:16:48.16:0,48,1177
chr10	71574396	.	T	TGTGGATGA	1404.70	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.788;DP=522;FS=24.927;HRun=0;HaplotypeScore=125.6568;InbreedingCoeff=0.9676;MQ=84.84;MQ0=0;MQRankSum=-5.658;QD=87.79;ReadPosRankSum=1.118;VQSLOD=2.2203;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,9:13:24.08:1102,24,0	0/0:10,0:10:27.05:0,27,642	0/0:18,0:18:51.17:0,51,1359	0/0:22,0:22:63.13:0,63,1695	0/0:19,0:19:54.17:0,54,1496	0/0:22,0:22:66.23:0,66,1977	0/0:18,0:18:54.17:0,54,1519	0/0:25,0:25:72.24:0,72,1903	0/0:15,0:15:45.15:0,45,1285	0/0:21,0:21:63.21:0,63,1740	0/0:14,0:14:42.14:0,42,1214	0/0:16,0:16:45.15:0,45,1340	0/0:20,0:20:57.17:0,57,1568	0/0:21,0:21:60.21:0,60,1714	0/0:18,0:18:54.19:0,54,1618	0/0:24,0:23:72.25:0,72,2143	0/0:15,0:15:45.15:0,45,1320	1/1:0,3:3:9.03:416,9,0	0/0:17,0:17:51.18:0,51,1499	0/0:25,0:25:75.26:0,75,2253	0/0:28,0:28:84.22:0,84,2379	0/0:21,0:21:63.21:0,63,1793	0/0:20,0:20:60.19:0,60,1701	0/0:16,0:16:48.16:0,48,1454	0/0:23,0:23:69.23:0,69,1952	0/0:22,0:22:66.22:0,66,1907	0/0:20,0:20:54.19:0,54,1578	0/0:16,0:16:45.10:0,45,1162
chr10	71575690	.	TAGTG	T	2151.98	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.108;DP=599;FS=2.128;HRun=0;HaplotypeScore=94.0937;InbreedingCoeff=0.9964;MQ=61.41;MQ0=1;MQRankSum=-2.314;QD=38.43;ReadPosRankSum=4.133;VQSLOD=3.9157;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:75.26:1419,75,0	0/0:7,0:7:21.07:0,21,555	0/0:25,0:24:60.21:0,60,1590	0/0:13,0:12:36.12:0,36,938	0/0:19,0:19:54.19:0,54,1426	0/0:31,0:31:93.29:0,93,2372	0/0:28,0:28:75.23:0,75,1937	0/0:24,0:24:66.23:0,66,1768	0/0:31,0:31:87.30:0,87,2309	0/0:18,0:18:44.74:0,45,1215	0/0:11,0:11:27.09:0,27,729	0/0:20,0:20:51.18:0,51,1376	0/0:28,0:28:84.25:0,84,2109	0/0:14,0:14:36.12:0,36,964	0/0:30,0:30:90.31:0,90,2390	0/0:25,0:25:75.26:0,75,2009	0/0:24,0:24:69.24:0,69,1862	1/1:1,20:21:45.15:854,45,0	0/0:19,0:19:48.11:0,48,1181	0/0:20,0:20:57.20:0,57,1538	0/0:23,0:23:69.22:0,69,1782	0/0:19,0:19:57.20:0,57,1527	0/0:11,0:11:30.10:0,30,809	0/0:21,0:21:63.22:0,63,1653	0/0:20,0:20:60.21:0,60,1620	0/0:20,0:20:51.17:0,51,1349	0/0:33,0:33:96.32:0,96,2527	0/0:9,0:9:27.04:0,27,604
chr10	71577946	.	ATCT	A	427.72	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.785;DP=469;FS=1.231;HRun=0;HaplotypeScore=62.7786;InbreedingCoeff=0.9113;MQ=79.65;MQ0=0;MQRankSum=-3.464;QD=30.55;ReadPosRankSum=1.033;VQSLOD=3.6276;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:27.09:441,27,0	0/0:3,0:3:9.03:0,9,201	0/0:11,0:11:30.10:0,30,671	0/0:13,0:13:27.09:0,27,557	0/0:34,0:34:96.33:0,96,2140	0/0:21,0:21:60.21:0,60,1340	0/0:11,0:11:30.10:0,30,662	0/0:22,0:22:60.19:0,60,1250	0/0:13,0:13:36.12:0,36,799	0/0:35,0:35:99:0,102,2277	0/0:25,0:25:75.26:0,75,1674	0/0:13,0:13:39.13:0,39,872	0/0:25,0:25:69.22:0,69,1496	0/0:11,0:11:33.11:0,33,733	0/0:12,0:12:36.12:0,36,800	0/0:23,0:23:66.23:0,66,1471	0/0:24,0:24:69.24:0,69,1534	1/1:0,4:4:6.02:98,6,0	0/0:18,0:18:54.19:0,54,1201	0/0:18,0:18:54.19:0,54,1201	0/0:11,0:11:33.11:0,33,719	0/0:9,0:9:27.09:0,27,603	0/0:16,0:16:48.16:0,48,1071	0/0:10,0:10:27.09:0,27,602	0/0:20,0:20:51.16:0,51,1099	0/0:25,0:25:75.26:0,75,1634	0/0:22,0:22:63.22:0,63,1385	0/0:10,0:10:30.10:0,30,664
chr10	71578246	.	AT	A	1256.99	PASS	AB=0.809;AC=29;AF=0.518;AN=56;BaseQRankSum=5.427;DP=416;FS=3.807;HRun=16;HaplotypeScore=55.4921;InbreedingCoeff=0.2516;MQ=82.02;MQ0=1;MQRankSum=-1.256;QD=4.29;ReadPosRankSum=3.690;VQSLOD=0.7871;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:13:24.44:71,24,0	1/1:0,1:1:2.94:18,3,0	0/1:21,2:16:0.30:0,0,73	0/0:18,0:16:3.39:0,3,18	0/0:26,1:32:24.11:0,24,274	0/1:10,5:16:21.09:21,0,167	0/1:8,3:11:32.99:39,0,33	0/1:15,5:20:50.19:50,0,53	0/0:9,0:10:11.83:0,12,90	0/1:10,9:20:8.92:61,0,9	0/1:6,6:12:4.64:87,0,5	0/0:12,2:14:8.90:0,9,170	1/1:13,9:22:23.32:143,23,0	0/1:13,1:14:3.04:3,0,84	0/0:14,1:17:10.31:0,10,138	1/1:4,15:19:44.02:269,44,0	1/1:3,13:18:17.23:202,17,0	1/1:3,0:11:16.25:47,16,0	0/0:15,1:17:11.79:0,12,195	0/0:12,1:13:11.94:0,12,205	0/1:6,2:8:6.22:6,0,44	0/0:2,0:2:2.99:0,3,23	1/1:1,5:6:11.74:72,12,0	1/1:4,4:9:12.79:65,13,0	1/1:4,14:18:43.86:264,44,0	0/1:11,2:15:8.26:8,0,135	0/1:25,3:29:2.38:2,0,283	0/1:5,1:7:6.88:7,0,80
chr10	71581279	.	C	CT	657.48	PASS	AB=0.895;AC=3;AF=0.054;AN=56;BaseQRankSum=-2.008;DP=530;FS=0.720;HRun=10;HaplotypeScore=55.6040;InbreedingCoeff=0.5795;MQ=68.27;MQ0=4;MQRankSum=-1.174;QD=15.29;ReadPosRankSum=1.077;VQSLOD=3.7942;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:69.17:735,69,0	0/0:4,0:4:11.99:0,12,99	0/0:45,0:24:33.66:0,34,265	0/0:35,0:19:15.48:0,15,114	0/0:29,0:29:71.86:0,72,589	0/1:15,2:17:28.05:28,0,207	0/0:11,0:11:32.96:0,33,271	0/0:29,0:28:56.88:0,57,463	0/0:14,0:14:38.86:0,39,308	0/0:24,0:24:59.88:0,60,486	0/0:29,0:29:57.13:0,57,618	0/0:17,0:17:32.93:0,33,269	0/0:19,0:19:53.94:0,54,443	0/0:13,0:13:26.93:0,27,215	0/0:22,0:22:59.91:0,60,490	0/0:13,0:13:35.94:0,36,293	0/0:18,0:18:42.69:0,43,383	0/0:14,0:14:32.83:0,33,257	0/0:12,0:12:32.95:0,33,270	0/0:19,0:19:47.68:0,48,394	0/0:13,0:13:32.96:0,33,271	0/0:10,0:10:20.95:0,21,169	0/0:13,0:13:29:0,29,225	0/0:3,0:3:5.99:0,6,49	0/0:16,0:16:35.94:0,36,296	0/0:23,0:23:56.92:0,57,468	0/0:30,0:30:73.93:0,74,596	0/0:12,0:12:20.90:0,21,166
chr10	71581717	.	A	AT	592.69	PASS	AB=0.847;AC=6;AF=0.107;AN=56;BaseQRankSum=-0.799;DP=490;FS=8.678;HRun=12;HaplotypeScore=58.8457;InbreedingCoeff=0.3001;MQ=68.88;MQ0=8;MQRankSum=-2.462;QD=6.31;ReadPosRankSum=-0.517;VQSLOD=1.2847;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,22:30:50.92:481,51,0	0/0:7,0:6:5.92:0,6,44	0/0:17,0:14:21.93:0,22,153	0/0:11,0:7:8.91:0,9,63	0/0:27,1:28:43.12:0,43,418	0/0:16,0:16:35.73:0,36,262	0/0:14,0:13:20.83:0,21,153	0/0:23,1:26:42.07:0,42,298	0/0:11,0:11:29.82:0,30,219	0/0:23,0:23:46.73:0,47,331	0/0:11,0:11:32.81:0,33,240	0/0:11,0:11:23.84:0,24,175	0/0:15,0:14:18.03:0,18,204	0/0:17,2:19:10.61:0,11,234	0/0:22,1:24:25.39:0,25,364	0/0:20,0:19:44.69:0,45,325	0/0:28,1:29:38.63:0,39,426	0/1:8,11:19:3.46:208,0,3	0/0:16,1:17:2.70:0,3,188	0/0:17,1:18:8.62:0,9,217	0/1:13,1:13:3.52:4,0,133	0/0:12,0:11:23.85:0,24,175	0/0:21,0:21:50.67:0,51,370	0/0:11,0:12:15.46:0,15,181	0/0:15,0:15:34.74:0,35,244	0/1:19,2:21:13.18:13,0,239	0/0:14,0:13:8.15:0,8,175	0/1:9,1:10:5.44:5,0,124
chr10	71583178	.	A	AATATAT	5911.94	PASS	AB=0.935;AC=17;AF=0.304;AN=56;BaseQRankSum=9.262;DP=705;FS=12.016;HRun=0;HaplotypeScore=167.7979;InbreedingCoeff=0.8899;MQ=62.22;MQ0=5;MQRankSum=-6.827;QD=27.50;ReadPosRankSum=0.109;VQSLOD=4.0609;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:87.27:0,87,1826	1/1:0,8:8:6.02:213,6,0	0/0:19,0:14:33.37:0,33,661	0/0:27,0:18:32.88:0,33,589	0/0:28,0:28:75.22:0,75,1590	0/0:23,0:23:63.20:0,63,1385	0/0:15,0:15:40.91:0,41,823	0/0:36,0:35:99:0,105,1958	0/0:29,0:29:78.24:0,78,1656	1/1:5,30:39:87.20:2553,87,0	1/1:0,24:29:24.08:775,24,0	0/0:33,0:33:85.17:0,85,1171	1/1:0,0:34:57.10:760,57,0	0/0:23,0:23:57.17:0,57,896	0/0:34,0:34:93.27:0,93,2068	0/0:40,0:40:99:0,114,2408	1/1:3,10:15:12.04:271,12,0	0/0:8,0:8:24.08:0,24,562	0/0:18,0:18:35.28:0,35,782	0/0:27,0:26:78.24:0,78,1584	0/0:20,0:19:48.15:0,48,1046	0/0:22,0:22:54.02:0,54,763	1/1:0,0:19:29.80:411,30,0	1/1:1,0:16:20.98:264,21,0	1/1:3,18:26:18.06:637,18,0	0/1:27,2:29:28.36:28,0,1459	0/0:31,0:31:87.29:0,87,1875	0/0:18,0:18:54.16:0,54,1185
chr10	71583180	.	T	TAC	2157.84	PASS	AB=0.843;AC=19;AF=0.339;AN=56;BaseQRankSum=4.698;DP=709;FS=1.946;HRun=0;HaplotypeScore=132.9428;InbreedingCoeff=0.5435;MQ=60.49;MQ0=5;MQRankSum=-3.308;QD=7.85;ReadPosRankSum=2.552;VQSLOD=3.6421;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:39:68.76:0,69,691	1/1:8,0:8:5.19:19,5,0	0/0:20,0:14:11.86:0,12,103	0/0:25,0:16:11.77:0,12,98	0/0:27,0:27:44.94:0,45,482	0/0:23,0:23:26.12:0,26,482	0/0:19,0:19:12.75:0,13,320	0/0:37,0:36:48.06:0,48,500	0/0:27,0:30:65.97:0,66,700	0/1:36,0:36:49.43:108,0,49	1/1:26,0:26:9.40:62,9,0	0/1:10,23:33:6.82:854,0,7	1/1:35,0:35:31.08:110,31,0	0/1:10,15:25:32.31:457,0,32	0/0:33,0:33:60.04:0,60,617	0/0:42,0:42:87.21:0,87,969	1/1:15,0:15:2.68:11,3,0	0/0:8,0:8:21.06:0,21,239	0/1:17,0:17:7.76:8,0,202	0/0:28,0:27:44.78:0,45,462	0/0:21,0:20:30:0,30,298	1/1:5,16:21:39.13:600,39,0	1/1:19,0:19:15.36:46,15,0	1/1:16,0:17:11.41:30,11,0	0/1:23,0:23:28.01:40,0,28	0/0:30,0:30:44.79:0,45,481	0/0:31,0:31:60.08:0,60,630	0/0:18,0:18:54.15:0,54,615
chr10	71586391	.	AT	A	808.85	PASS	AB=0.917;AC=7;AF=0.125;AN=56;BaseQRankSum=7.306;DP=544;FS=6.045;HRun=12;HaplotypeScore=55.6447;InbreedingCoeff=0.4501;MQ=64.73;MQ0=0;MQRankSum=-0.857;QD=9.30;ReadPosRankSum=2.586;VQSLOD=2.5053;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:83.65:648,84,0	0/0:10,0:10:24.01:0,24,229	0/0:13,0:8:9:0,9,84	0/1:11,0:8:11.37:11,0,57	0/0:26,0:27:64:0,64,634	0/0:23,2:24:16.65:0,17,531	0/0:14,0:14:36.05:0,36,358	0/0:36,0:37:87.14:0,87,862	0/0:17,0:17:39.04:0,39,385	0/0:25,0:25:54.07:0,54,534	0/0:19,0:19:54.11:0,54,548	0/0:18,2:21:4.46:0,4,394	0/0:16,1:17:24.85:0,25,427	0/0:19,0:19:45.08:0,45,450	0/0:16,1:17:24.69:0,25,433	0/0:21,0:21:54.10:0,54,543	0/0:26,1:27:51.84:0,52,691	1/1:3,11:15:34.88:258,35,0	0/0:15,2:17:1.60:0,2,365	0/0:15,0:16:44.92:0,45,441	0/1:10,2:12:22.43:22,0,159	0/0:8,0:8:15.01:0,15,140	0/0:17,0:17:42.08:0,42,426	0/0:28,0:28:69.12:0,69,693	0/0:21,0:21:60:0,60,554	0/1:15,2:17:7.37:7,0,291	0/0:15,0:15:42.07:0,42,420	0/0:24,0:26:71.70:0,72,649
chr10	71587134	.	TAGTA	T	1079.05	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.386;DP=725;FS=0.791;HRun=0;HaplotypeScore=107.9204;InbreedingCoeff=0.9982;MQ=76.69;MQ0=1;MQRankSum=-3.533;QD=34.81;ReadPosRankSum=2.936;VQSLOD=3.9567;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:42.14:764,42,0	0/0:16,0:16:45.15:0,45,1163	0/0:20,0:20:36.70:0,37,1373	0/0:11,0:11:30.06:0,30,613	0/0:35,0:35:99:0,99,2500	0/0:33,0:32:96.32:0,96,2390	0/0:22,0:22:57.20:0,57,1422	0/0:40,0:40:99:0,105,2633	0/0:31,0:31:84.29:0,84,2183	0/0:36,0:36:99:0,102,2608	0/0:27,0:27:75.24:0,75,1894	0/0:35,0:34:84.27:0,84,2128	0/0:32,0:32:81.28:0,81,2116	0/0:27,0:27:78.27:0,78,1977	0/0:34,0:34:93.32:0,93,2432	0/0:26,0:26:66.23:0,66,1724	0/0:18,0:18:54.16:0,54,1345	1/1:1,12:13:24.08:436,24,0	0/0:16,0:16:42.14:0,42,1095	0/0:32,0:32:87.30:0,87,2251	0/0:21,0:21:48.15:0,48,1189	0/0:13,0:13:32.98:0,33,801	0/0:31,0:31:93.32:0,93,2394	0/0:27,0:27:72.25:0,72,1861	0/0:31,0:31:90.31:0,90,2295	0/0:28,0:28:78.26:0,78,1982	0/0:42,0:42:99:0,123,3109	0/0:10,0:10:30.10:0,30,772
chr10	71590595	.	G	GA	3651.94	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-11.974;DP=689;FS=0.000;HRun=4;HaplotypeScore=65.7566;InbreedingCoeff=0.9983;MQ=86.28;MQ0=0;MQRankSum=-1.414;QD=37.26;ReadPosRankSum=2.210;VQSLOD=3.6300;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,129,1452	1/1:0,10:10:30.10:410,30,0	0/0:27,0:27:72.17:0,72,786	0/0:20,0:19:48.10:0,48,516	0/0:28,0:28:75.20:0,75,840	0/0:18,0:18:48.13:0,48,544	0/0:16,0:16:39.11:0,39,442	0/0:37,0:37:99:0,108,1211	0/0:24,0:24:69.20:0,69,782	1/1:2,22:24:66.22:903,66,0	1/1:2,22:24:66.22:903,66,0	0/0:14,0:14:42.10:0,42,466	0/0:47,0:47:99:0,138,1555	0/0:26,0:26:75.21:0,75,850	0/0:25,0:25:63.16:0,63,704	0/0:35,0:35:99:0,99,1093	1/1:2,17:19:51.17:697,51,0	0/0:15,0:15:39.11:0,39,442	0/0:21,0:21:48.14:0,48,544	0/0:25,0:25:69.15:0,69,751	0/0:42,0:42:99:0,111,1248	0/0:21,0:21:57.15:0,57,637	0/0:20,0:20:51.14:0,51,578	0/0:25,0:25:72.20:0,72,817	1/1:1,20:21:54.18:739,54,0	0/0:19,1:20:19.13:0,19,605	0/0:26,0:26:75.21:0,75,850	0/0:12,0:12:33.01:0,33,346
chr10	71591347	.	TTTA	T	988.63	PASS	AC=22;AF=0.478;AN=46;BaseQRankSum=0.718;DP=266;FS=1.905;HRun=0;HaplotypeScore=42.1197;InbreedingCoeff=0.7471;MQ=71.56;MQ0=1;MQRankSum=0.576;QD=8.45;ReadPosRankSum=2.013;VQSLOD=2.4033;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:8:11.91:0,12,113	0/0:5,0:5:3.01:0,3,45	./.	./.	0/0:13,0:13:18.06:0,18,346	0/0:10,0:10:12.04:0,12,231	1/1:8,0:8:3:25,3,0	0/0:28,0:28:12.04:0,12,202	0/0:3,0:7:15.04:0,15,182	0/0:7,0:7:6.02:0,6,111	0/0:4,0:7:9.03:0,9,118	0/0:10,0:10:6.02:0,6,115	1/1:7,0:10:8.93:63,9,0	0/0:3,0:3:3.01:0,3,58	1/1:7,1:10:5.99:61,6,0	1/1:3,4:7:6.02:79,6,0	0/0:8,0:12:18.06:0,18,279	0/0:6,0:13:21.07:0,21,275	1/1:17,3:21:15:164,15,0	1/1:7,3:10:9.03:114,9,0	1/1:5,2:7:6.02:79,6,0	./.	./.	./.	1/1:7,4:11:12.04:158,12,0	1/1:8,4:12:12.03:144,12,0	1/1:10,4:14:12.04:158,12,0	1/1:3,4:6:9.03:119,9,0
chr10	71594662	.	G	GT	2809.98	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.737;DP=836;FS=12.052;HRun=4;HaplotypeScore=78.0861;InbreedingCoeff=0.9997;MQ=86.07;MQ0=0;MQRankSum=-2.919;QD=35.12;ReadPosRankSum=2.679;VQSLOD=3.3286;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,52:55:99:1947,144,0	0/0:10,0:10:30.09:0,30,340	0/0:26,0:26:59.27:0,59,629	0/0:30,0:30:72.03:0,72,785	0/0:29,0:29:81.20:0,81,897	0/0:25,0:25:72.21:0,72,816	0/0:42,0:42:99:0,117,1284	0/0:31,0:31:81.20:0,81,893	0/0:26,0:26:75.19:0,75,839	0/0:35,0:35:93.26:0,93,1055	0/0:20,0:20:57.16:0,57,646	0/0:44,0:44:99:0,126,1399	0/0:36,0:36:99:0,108,1223	0/0:40,0:40:99:0,117,1326	0/0:36,0:36:99:0,102,1147	0/0:36,0:36:99:0,108,1225	0/0:20,0:20:57.15:0,57,635	1/1:0,25:25:72.24:985,72,0	0/0:25,0:25:69.16:0,69,750	0/0:32,0:32:93.19:0,93,1007	0/0:39,0:39:99:0,111,1248	0/0:23,0:23:63.18:0,63,714	0/0:21,0:21:60.17:0,60,680	0/0:39,0:39:99:0,111,1258	0/0:26,0:26:75.20:0,75,841	0/0:26,0:26:72.20:0,72,816	0/0:26,0:26:78.19:0,78,860	0/0:13,0:13:36.10:0,36,408
chr10	71597604	.	TGGTGCAATGG	T	639.37	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.560;DP=683;FS=21.241;HRun=0;HaplotypeScore=199.2250;InbreedingCoeff=0.9947;MQ=89.61;MQ0=0;MQRankSum=-4.817;QD=39.96;ReadPosRankSum=0.936;VQSLOD=2.0282;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,6858	0/0:20,0:20:60.21:0,60,3211	0/0:25,0:25:72.25:0,72,3231	0/0:27,0:27:78.21:0,78,3218	0/0:14,0:14:35.84:0,36,1796	0/0:28,0:28:78.27:0,78,4077	0/0:28,0:28:84.29:0,84,4298	0/0:37,0:37:99:0,108,5359	0/0:31,0:31:93.31:0,93,4784	0/0:19,0:19:51.18:0,51,2714	0/0:8,0:8:24.08:0,24,1211	0/0:21,0:21:63.22:0,63,3345	0/0:28,0:28:84.27:0,84,3834	0/0:22,0:22:66.23:0,66,3450	0/0:34,0:34:99:0,102,5276	0/0:44,0:44:99:0,132,6374	0/0:19,0:19:57.20:0,57,3046	1/1:6,10:16:24.02:733,24,0	0/0:21,0:21:60.21:0,60,2970	0/0:19,0:19:54.19:0,54,2815	0/0:43,0:43:99:0,126,6324	0/0:17,0:17:45.14:0,45,2288	0/0:14,0:14:42.11:0,42,1825	0/0:28,0:28:84.24:0,84,4058	0/0:23,0:23:63.19:0,63,3029	0/0:24,0:24:66.23:0,66,3509	0/0:19,0:19:57.20:0,57,3056	0/0:9,0:9:27.09:0,27,1457
chr10	71597879	.	TA	T	1285.64	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.526;DP=655;FS=8.612;HRun=7;HaplotypeScore=59.5724;InbreedingCoeff=0.9486;MQ=73.80;MQ0=0;MQRankSum=-4.824;QD=26.24;ReadPosRankSum=0.306;VQSLOD=3.9880;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:87.20:887,87,0	0/0:11,0:11:24.08:0,24,302	0/0:23,0:23:55.29:0,55,665	0/0:13,0:13:6.19:0,6,308	0/0:31,0:31:87.28:0,87,1093	0/0:27,0:27:78.25:0,78,981	0/0:21,0:21:60.18:0,60,741	0/0:29,0:29:84.27:0,84,1055	0/0:25,0:25:75.24:0,75,942	0/0:31,0:31:87.27:0,87,1083	0/0:22,0:22:57.18:0,57,717	0/0:12,0:12:36.12:0,36,453	0/0:25,1:26:35.59:0,36,751	0/0:29,0:29:81.26:0,81,1019	0/0:25,0:25:72.19:0,72,888	0/0:22,0:22:60.19:0,60,755	0/0:27,0:27:81.23:0,81,1003	1/1:0,17:17:51.12:520,51,0	0/0:13,0:13:30.10:0,30,377	0/0:22,0:22:60.19:0,60,755	0/0:13,0:13:36.11:0,36,452	0/0:23,0:23:66.21:0,66,830	0/0:25,0:25:69.21:0,69,855	0/0:20,0:20:57.17:0,57,705	0/0:38,0:38:99:0,102,1283	0/0:27,0:27:69.21:0,69,856	0/0:32,0:32:90.29:0,90,1131	0/0:17,0:17:51.16:0,51,641
chr10	71598160	.	ATAGT	A	1724.03	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.147;DP=545;FS=0.626;HRun=0;HaplotypeScore=92.8756;InbreedingCoeff=0.9094;MQ=88.66;MQ0=0;MQRankSum=-5.594;QD=36.68;ReadPosRankSum=0.389;VQSLOD=3.7686;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,22:29:63.18:1125,63,0	0/0:6,0:6:18.06:0,18,486	0/0:19,0:20:38.68:0,39,1161	0/0:21,0:21:2.81:0,3,876	0/0:29,0:29:84.29:0,84,2256	0/0:24,0:24:69.24:0,69,1861	0/0:22,0:22:60.14:0,60,1556	0/0:23,0:23:66.21:0,66,1642	0/0:21,0:21:51.15:0,51,1235	0/0:17,0:17:45.15:0,45,1214	0/0:11,0:11:33.11:0,33,861	0/0:21,0:21:57.20:0,57,1527	0/0:15,0:15:42.12:0,42,1074	0/0:18,0:18:54.19:0,54,1457	0/0:23,0:23:69.24:0,69,1862	0/0:21,0:21:60.21:0,60,1591	0/0:18,0:18:51.18:0,51,1347	1/1:2,16:18:39.13:720,39,0	0/0:11,0:11:33.11:0,33,888	0/0:27,0:27:81.24:0,81,1976	0/0:19,0:19:54.13:0,54,1340	0/0:19,0:19:51.18:0,51,1362	0/0:18,0:18:54.17:0,54,1394	0/0:30,0:30:90.24:0,90,2219	0/0:12,0:12:36.11:0,36,918	0/0:24,0:24:72.25:0,72,1943	0/0:20,0:20:57.20:0,57,1515	0/0:8,0:8:24.08:0,24,647
chr10	71598239	.	TG	T	1863.15	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.453;DP=594;FS=5.360;HRun=1;HaplotypeScore=64.8367;InbreedingCoeff=0.9989;MQ=85.36;MQ0=0;MQRankSum=-6.326;QD=37.26;ReadPosRankSum=3.346;VQSLOD=4.1856;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:84.28:1172,84,0	0/0:8,0:8:24.07:0,24,337	0/0:17,0:17:45.09:0,45,648	0/0:21,0:21:54.07:0,54,700	0/0:21,0:21:60.20:0,60,953	0/0:23,0:23:69.16:0,69,1023	0/0:34,0:34:96.30:0,96,1482	0/0:14,0:14:42.14:0,42,651	0/0:14,0:14:39.13:0,39,622	0/0:25,0:25:75.25:0,75,1170	0/0:16,0:16:47.88:0,48,707	0/0:22,0:22:66.21:0,66,1020	0/0:16,0:16:48.10:0,48,663	0/0:22,0:22:66.21:0,66,1023	0/0:27,0:27:81.22:0,81,1200	0/0:25,0:25:75.21:0,75,1148	0/0:28,0:28:84.22:0,84,1262	1/1:0,20:20:60.15:813,60,0	0/0:16,0:16:48.14:0,48,721	0/0:28,0:28:84.23:0,84,1241	0/0:15,0:15:45.12:0,45,670	0/0:31,0:31:93.24:0,93,1362	0/0:18,0:18:54.15:0,54,814	0/0:23,0:23:69.24:0,69,1101	0/0:19,0:19:57.19:0,57,907	0/0:20,0:20:60.20:0,60,937	0/0:19,0:19:57.19:0,57,909	0/0:22,0:22:66.16:0,66,1000
chr10	71598722	.	C	CCTCAGATCATAG	4842.26	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.409;DP=757;FS=1.519;HRun=0;HaplotypeScore=265.2326;InbreedingCoeff=0.9986;MQ=76.46;MQ0=1;MQRankSum=-8.263;QD=112.61;ReadPosRankSum=0.439;VQSLOD=4.7546;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,13:32:60.20:3471,60,0	0/0:14,0:14:42.13:0,42,1492	0/0:35,0:34:60.84:0,61,2725	0/0:39,0:37:90.04:0,90,2455	0/0:15,0:15:45.15:0,45,1645	0/0:30,0:31:90.31:0,90,3241	0/0:27,0:27:81.27:0,81,2911	0/0:30,0:30:75.25:0,75,2629	0/0:24,0:24:66.23:0,66,2438	0/0:27,0:27:72.24:0,72,2514	0/0:16,0:16:39.12:0,39,1333	0/0:29,0:29:78.26:0,78,2671	0/0:40,0:41:99:0,120,4278	0/0:33,0:33:96.31:0,96,3445	0/0:33,0:33:99:0,99,3584	0/0:29,0:29:84.26:0,84,2994	0/0:28,0:28:78.27:0,78,2935	1/1:7,4:11:24.08:1371,24,0	0/0:27,0:27:66.22:0,66,2273	0/0:24,0:24:60.19:0,60,2130	0/0:36,0:36:99:0,99,3428	0/0:25,0:25:75.25:0,75,2649	0/0:17,0:17:42.14:0,42,1481	0/0:50,0:50:99:0,132,4787	0/0:21,0:21:60.20:0,60,2057	0/0:19,0:19:51.18:0,51,1849	0/0:31,0:31:90.31:0,90,3310	0/0:11,0:11:30.10:0,30,1104
chr10	71598767	.	CTG	C	1771.98	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.947;DP=661;FS=5.876;HRun=0;HaplotypeScore=88.3564;InbreedingCoeff=0.9956;MQ=85.12;MQ0=0;MQRankSum=-6.905;QD=38.52;ReadPosRankSum=-1.326;VQSLOD=5.0472;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:87.29:1362,87,0	0/0:12,0:12:36.12:0,36,730	0/0:16,0:16:48.07:0,48,839	0/0:40,0:37:86.03:0,86,1640	0/0:22,0:22:66.20:0,66,1301	0/0:25,0:25:75.26:0,75,1523	0/0:29,0:29:87.30:0,87,1766	0/0:31,0:30:93.32:0,93,1877	0/0:23,0:23:69.22:0,69,1342	0/0:20,0:20:60.20:0,60,1183	0/0:16,0:16:48.15:0,48,926	0/0:33,0:33:99:0,99,2002	0/0:25,0:25:75.24:0,75,1484	0/0:35,0:35:99:0,105,2026	0/0:27,0:27:81.26:0,81,1585	0/0:23,0:23:69.24:0,69,1391	0/0:23,0:23:69.22:0,69,1353	1/1:0,10:11:33.11:532,33,0	0/0:23,0:23:63.16:0,63,1238	0/0:23,0:23:66.21:0,66,1304	0/0:32,0:32:96.32:0,96,1913	0/0:15,0:15:42.11:0,42,811	0/0:7,0:7:21.07:0,21,427	0/0:40,0:40:99:0,111,2166	0/0:24,0:24:72.23:0,72,1416	0/0:19,0:19:57.20:0,57,1158	0/0:25,0:25:75.26:0,75,1504	0/0:7,0:7:21.07:0,21,426
chr10	71601903	.	CAG	C	2417.72	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.213;DP=804;FS=5.711;HRun=0;HaplotypeScore=92.4426;InbreedingCoeff=0.9993;MQ=80.20;MQ0=2;MQRankSum=-2.702;QD=34.05;ReadPosRankSum=1.245;VQSLOD=5.9778;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,163,3005	0/0:14,0:14:42.12:0,42,752	0/0:18,0:18:51.12:0,51,858	0/0:22,0:22:54.18:0,54,940	0/0:32,0:32:93.32:0,93,1740	0/0:25,0:25:75.26:0,75,1388	0/0:35,0:35:99:0,99,1725	0/0:25,0:25:72.25:0,72,1345	0/0:37,0:37:99:0,111,1996	0/0:27,0:27:81.26:0,81,1409	0/0:19,0:19:57.20:0,57,1059	0/0:44,0:44:99:0,129,2408	1/1:0,23:21:54.18:795,54,0	0/0:32,0:32:93.30:0,93,1699	0/0:35,0:35:99:0,99,1846	0/0:36,0:36:99:0,108,2016	0/0:33,0:33:93.32:0,93,1742	0/0:29,0:29:84.27:0,84,1531	0/0:22,0:22:66.20:0,66,1171	0/0:20,0:20:57.17:0,57,999	0/0:43,0:43:99:0,123,2257	0/0:18,0:18:54.19:0,54,1010	1/1:2,11:13:27.09:397,27,0	1/1:0,35:35:93.31:1369,93,0	0/0:29,0:29:84.27:0,84,1542	0/0:29,0:29:87.28:0,87,1571	0/0:46,0:45:99:0,138,2537	0/0:9,0:9:27.09:0,27,496
chr10	71603594	.	CCACACACA	C	513.19	PASS	AB=1.000;AC=13;AF=0.310;AN=42;BaseQRankSum=6.221;DP=451;FS=0.000;HRun=0;HaplotypeScore=92.2981;InbreedingCoeff=0.5793;MQ=58.33;MQ0=75;MQRankSum=-0.944;QD=3.59;ReadPosRankSum=0.415;VQSLOD=0.8646;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:27:3.81:91,4,0	./.	./.	./.	0/0:9,0:7:3.01:0,3,68	0/0:13,0:12:18.04:0,18,426	0/0:27,0:24:12.51:0,13,366	0/0:18,0:14:0.89:0,1,2	0/0:16,0:15:15.05:0,15,322	1/1:13,0:5:3.01:54,3,0	./.	0/0:14,0:13:4.38:0,4,351	1/1:16,0:13:2.50:9,2,0	0/0:14,0:14:7.38:0,7,150	0/0:15,0:13:3.27:0,3,49	0/0:12,0:12:13.86:0,14,353	1/1:23,0:12:9.03:166,9,0	1/1:12,6:12:3.01:71,3,0	0/1:8,0:8:0:0,0,0	0/0:7,0:5:3.01:0,3,31	0/0:39,0:27:24.06:0,24,624	0/0:7,0:5:5.99:0,6,53	./.	1/1:33,0:20:30.86:253,31,0	./.	0/0:16,0:14:12.04:0,12,188	0/0:12,0:10:10.78:0,11,333	./.
chr10	71603597	.	CA	C	655.02	PASS	AB=0.650;AC=9;AF=0.173;AN=52;BaseQRankSum=6.441;DP=463;FS=0.000;HRun=1;HaplotypeScore=55.4124;InbreedingCoeff=0.7309;MQ=50.29;MQ0=83;MQRankSum=0.675;QD=6.97;ReadPosRankSum=1.109;VQSLOD=0.4315;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:26:17.19:0,17,497	1/1:0,7:7:15.05:200,15,0	0/0:23,0:10:27:0,27,294	0/0:30,0:13:35.14:0,35,395	0/0:9,0:7:15:0,15,170	0/0:14,0:13:29.69:0,30,387	0/0:26,1:23:52:0,52,652	0/0:20,0:16:32.14:0,32,331	0/0:18,0:16:33.21:0,33,385	0/1:6,6:5:1.47:55,0,1	./.	0/0:14,0:12:5.70:0,6,319	1/1:3,0:14:2.99:33,3,0	0/0:17,0:17:19.57:0,20,391	0/0:16,0:14:34.60:0,35,374	0/0:12,0:12:29.80:0,30,370	1/1:9,5:13:8.98:73,9,0	0/0:19,0:12:16.86:0,17,193	0/0:9,0:9:16.24:0,16,186	0/0:7,0:5:5.88:0,6,53	0/0:42,0:28:56.87:0,57,697	0/0:8,0:6:11.87:0,12,122	./.	1/1:12,20:19:39.57:439,40,0	0/0:3,0:10:3.01:0,3,38	0/0:17,0:15:32.02:0,32,322	0/0:12,0:10:29.88:0,30,314	0/0:3,0:2:6.02:0,6,75
chr10	71603729	.	AAGGCC	A	3886.62	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.227;DP=571;FS=10.786;HRun=0;HaplotypeScore=114.2863;InbreedingCoeff=0.9984;MQ=69.80;MQ0=0;MQRankSum=-5.114;QD=49.20;ReadPosRankSum=2.318;VQSLOD=3.6890;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.33:0,96,2847	1/1:1,8:9:21.07:447,21,0	0/0:27,0:26:59.75:0,60,1745	0/0:21,0:20:51.12:0,51,1390	0/0:23,0:23:69.24:0,69,2093	0/0:16,0:16:45.15:0,45,1384	0/0:29,0:29:81.28:0,81,2515	0/0:48,0:48:99:0,135,4005	0/0:12,0:12:36.12:0,36,1126	1/1:0,19:18:54.14:1034,54,0	1/1:0,17:17:48.08:935,48,0	0/0:16,0:16:42.14:0,42,1305	0/0:15,0:15:45.15:0,45,1361	0/0:22,0:22:60.21:0,60,1849	0/0:15,0:15:42.14:0,42,1316	0/0:11,0:11:30.10:0,30,932	1/1:3,15:18:36.12:767,36,0	0/0:14,0:14:39.13:0,39,1202	0/0:23,0:23:51.17:0,51,1562	0/0:11,0:11:30.10:0,30,940	0/0:39,0:39:99:0,111,3403	0/0:16,0:16:45.15:0,45,1375	0/0:11,0:11:30.09:0,30,858	0/0:38,0:38:99:0,114,3114	1/1:0,16:16:33.11:703,33,0	0/0:20,0:20:60.21:0,60,1857	0/0:10,0:10:30.10:0,30,932	0/0:22,0:22:66.23:0,66,2021
chr10	71604311	.	G	GA	423.07	PASS	AB=0.992;AC=7;AF=0.125;AN=56;BaseQRankSum=3.979;DP=425;FS=2.311;HRun=9;HaplotypeScore=52.5101;InbreedingCoeff=0.1872;MQ=75.53;MQ0=0;MQRankSum=-1.033;QD=5.10;ReadPosRankSum=1.239;VQSLOD=0.1509;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:15:44.95:471,45,0	0/0:4,0:4:11.43:0,11,57	0/1:12,0:11:17.94:18,0,40	0/1:10,0:10:13.41:13,0,34	0/0:15,0:15:35.99:0,36,312	0/0:18,0:17:47.99:0,48,417	0/0:10,0:10:26.97:0,27,230	0/0:32,0:32:71.96:0,72,624	0/0:11,0:12:29.01:0,29,236	0/1:23,1:24:1.47:1,0,103	0/0:22,0:22:47.29:0,47,245	0/0:13,0:13:26.99:0,27,234	0/1:13,0:13:24.10:24,0,52	0/0:15,0:15:32.98:0,33,286	0/0:16,0:16:47.99:0,48,416	0/0:9,0:9:20.98:0,21,182	0/0:18,0:18:33.59:0,34,161	0/0:23,1:24:29.79:0,30,487	0/0:21,0:21:50.98:0,51,442	0/0:24,0:24:59.86:0,60,503	0/0:5,0:7:19.05:0,19,136	0/0:9,0:9:14.99:0,15,130	0/1:9,0:9:10.20:24,0,10	0/0:2,0:2:6:0,6,52	0/0:16,1:17:0.86:0,1,112	0/0:14,0:14:23.97:0,24,208	0/0:24,0:24:53.98:0,54,468	0/0:16,0:16:44.99:0,45,390
chr10	71604674	.	AGT	A	562.48	PASS	AB=0.966;AC=7;AF=0.125;AN=56;BaseQRankSum=4.443;DP=678;FS=5.779;HRun=0;HaplotypeScore=106.5040;InbreedingCoeff=0.4840;MQ=63.46;MQ0=9;MQRankSum=-1.430;QD=5.74;ReadPosRankSum=1.412;VQSLOD=2.8285;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,5:21:33.10:408,33,0	0/0:2,0:2:2.22:0,2,7	0/0:32,1:17:36.09:0,36,511	0/0:38,0:15:11.93:0,12,163	0/0:21,0:21:48.15:0,48,758	0/0:30,1:31:17.19:0,17,1042	0/0:26,0:26:60.17:0,60,901	0/0:24,0:23:42.02:0,42,625	0/0:26,0:26:51.08:0,51,779	0/1:32,1:32:19.68:20,0,293	0/1:15,0:15:2.72:3,0,120	0/0:35,0:35:93.26:0,93,1413	0/0:22,0:23:55.58:0,56,841	0/0:37,0:37:93.32:0,93,1510	0/0:21,1:22:13.97:0,14,723	0/0:27,0:27:63.20:0,63,1006	0/0:28,0:27:18.03:0,18,235	1/1:10,4:13:9.39:254,9,0	0/0:15,0:14:30.53:0,31,451	0/0:14,0:14:30.07:0,30,452	0/0:51,0:50:99:0,123,1846	0/1:12,1:12:4.52:5,0,397	0/0:15,0:15:24.08:0,24,392	0/0:35,1:35:60.16:0,60,908	0/0:17,0:17:3.54:0,4,129	0/0:22,1:23:16.98:0,17,723	0/0:23,0:23:43.70:0,44,674	0/0:13,0:13:33.11:0,33,523
chr10	71604681	.	GTGTGTGTGTA	G	1522.26	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.971;DP=687;FS=11.171;HRun=0;HaplotypeScore=196.9278;InbreedingCoeff=0.9125;MQ=57.94;MQ0=19;MQRankSum=0.504;QD=15.69;ReadPosRankSum=-1.812;VQSLOD=1.7658;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:23.39:0,23,640	1/1:2,0:2:3.01:74,3,0	0/0:32,0:16:21.81:0,22,183	0/0:31,0:9:8.93:0,9,64	0/0:26,0:25:53.47:0,53,1515	0/0:31,0:31:78.08:0,78,1892	0/0:26,0:26:37.83:0,38,1152	0/0:28,0:18:38.89:0,39,440	0/0:27,0:27:54.03:0,54,1743	1/1:10,25:33:56.11:876,56,0	1/1:3,14:17:11.87:217,12,0	0/0:40,0:39:89.04:0,89,2497	0/0:23,0:23:51:0,51,716	0/0:39,0:39:99:0,99,3055	0/0:23,0:22:51.07:0,51,1662	0/0:25,0:24:60.14:0,60,2358	1/1:26,1:26:8.94:123,9,0	0/0:16,0:15:15.64:0,16,404	0/0:18,0:16:20.15:0,20,462	0/0:15,0:15:29.29:0,29,892	0/0:52,0:51:99:0,112,3583	0/0:12,0:11:20.96:0,21,965	0/0:14,0:14:24.05:0,24,391	0/0:34,0:33:48.06:0,48,687	1/1:5,11:16:18.06:393,18,0	0/0:21,0:21:45.07:0,45,1369	0/0:21,0:20:42.60:0,43,1143	0/0:13,0:13:26.98:0,27,434
chr10	71604691	.	ATGTGTGTGTATG	A	720.86	PASS	AB=0.880;AC=7;AF=0.125;AN=56;BaseQRankSum=7.491;DP=705;FS=0.000;HRun=0;HaplotypeScore=225.5934;InbreedingCoeff=0.4170;MQ=55.39;MQ0=31;MQRankSum=-0.415;QD=7.92;ReadPosRankSum=-1.154;VQSLOD=2.1955;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:22:29.35:0,29,823	1/1:0,1:1:3.01:109,3,0	0/0:26,0:10:21.81:0,22,183	0/0:24,0:4:8.93:0,9,64	0/0:24,0:24:59.51:0,60,1905	0/0:32,0:32:71.16:0,71,2288	0/0:34,0:34:50.79:0,51,1826	0/0:34,0:21:53.16:0,53,821	0/0:28,0:28:60.13:0,60,2326	0/1:32,0:30:99:241,0,105	0/1:15,0:15:22.72:78,0,23	0/0:43,0:42:99:0,100,3250	0/0:25,0:24:53.79:0,54,1040	0/0:39,0:39:99:0,108,3730	0/0:24,0:22:46.82:0,47,1911	0/0:29,0:26:60.80:0,61,2815	0/1:11,14:24:19.67:20,0,109	0/0:12,0:11:15.66:0,16,482	0/0:19,0:16:35.10:0,35,719	0/0:13,0:12:34.89:0,35,1015	0/0:59,0:53:99:0,112,4211	0/0:18,0:17:48.02:0,48,1443	0/0:14,0:14:26.73:0,27,526	0/0:35,0:34:55.95:0,56,970	1/1:16,2:17:18.53:405,19,0	0/0:22,0:22:57.02:0,57,1897	0/0:22,0:21:51.63:0,52,1439	0/0:12,0:12:29.99:0,30,545
chr10	71604701	.	ATGTG	A	1287.70	PASS	AB=1.000;AC=10;AF=0.185;AN=54;BaseQRankSum=7.012;DP=745;FS=0.632;HRun=0;HaplotypeScore=138.1116;InbreedingCoeff=0.4724;MQ=54.02;MQ0=41;MQRankSum=-1.111;QD=9.76;ReadPosRankSum=4.551;VQSLOD=2.4546;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:24:28.72:0,29,368	0/1:2,0:2:18.95:21,0,19	./.	0/0:27,0:4:1.55:0,2,4	0/0:24,0:27:44.89:0,45,976	0/0:32,0:33:59.52:0,60,1152	0/0:30,0:35:62.55:0,63,1144	0/0:39,0:26:44.13:0,44,799	0/0:25,0:28:53.92:0,54,1180	0/0:32,0:29:5.80:0,6,408	0/1:16,0:16:34.21:34,0,85	0/0:41,0:42:30.53:0,31,1565	1/1:9,13:22:33.10:519,33,0	0/0:39,0:42:83.46:0,83,1634	0/0:23,0:23:38.84:0,39,788	0/0:28,0:25:59.67:0,60,1298	0/0:25,0:24:21.53:0,22,260	0/1:16,0:13:16.46:16,0,56	0/0:24,0:21:39.53:0,40,650	0/0:16,0:15:32.38:0,32,595	0/0:62,0:54:91.97:0,92,1868	0/0:21,0:19:45.15:0,45,941	1/1:5,11:16:18.03:295,18,0	1/1:13,22:34:15.97:499,16,0	0/1:23,0:22:61.65:62,0,220	0/0:18,0:20:44.62:0,45,887	0/0:22,0:23:41.61:0,42,817	0/0:11,0:11:11.40:0,11,226
chr10	71604725	.	GTGT	G	236.51	PASS	AB=0.987;AC=6;AF=0.107;AN=56;BaseQRankSum=8.698;DP=757;FS=2.161;HRun=0;HaplotypeScore=129.6218;InbreedingCoeff=0.2714;MQ=56.93;MQ0=44;MQRankSum=1.662;QD=2.21;ReadPosRankSum=2.404;VQSLOD=2.6227;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:18:11.96:12,0,80	0/0:5,0:5:13.85:0,14,177	0/0:45,0:16:41.32:0,41,536	0/0:38,0:17:44.15:0,44,512	0/0:24,0:24:52.24:0,52,931	0/0:33,0:32:86.42:0,86,1390	0/0:33,0:33:47.04:0,47,1220	0/0:53,0:40:99:0,113,1582	0/0:29,0:29:71.79:0,72,1296	0/0:31,0:28:29.14:0,29,911	0/0:20,0:20:32.69:0,33,419	0/0:34,0:33:78.17:0,78,1503	0/1:17,1:17:51.65:52,0,85	0/0:30,0:31:79.25:0,79,1490	0/0:24,0:22:62.76:0,63,1057	0/0:28,0:25:68.41:0,68,1248	0/0:32,0:32:54.63:0,55,935	1/1:7,10:15:18.05:253,18,0	0/0:24,0:20:11.96:0,12,644	0/0:18,0:17:44.31:0,44,717	0/0:52,0:45:99:0,107,1969	0/0:25,0:23:66.17:0,66,1152	0/1:20,0:19:2.51:3,0,278	0/1:31,0:30:39.45:39,0,157	0/0:27,0:26:48.12:0,48,683	0/0:18,0:18:50.34:0,50,875	0/0:21,0:19:45.62:0,46,786	0/0:5,0:5:14.72:0,15,227
chr10	71604727	.	GT	G	123.23	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.749;DP=751;FS=3.455;HRun=2;HaplotypeScore=106.3804;InbreedingCoeff=0.9446;MQ=57.37;MQ0=41;MQRankSum=-0.545;QD=3.42;ReadPosRankSum=-0.384;VQSLOD=0.2002;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,4:18:9.66:80,10,0	0/0:6,0:6:17.96:0,18,193	0/0:47,0:18:46.80:0,47,588	0/0:39,0:18:48.09:0,48,540	0/0:23,0:23:48.17:0,48,687	0/0:34,0:33:88.64:0,89,1146	0/0:31,0:31:46.57:0,47,929	0/0:50,0:41:99:0,116,1489	0/0:29,0:29:71.41:0,71,961	0/0:30,0:27:33.16:0,33,727	0/0:19,0:19:33.19:0,33,370	0/0:32,0:31:84.18:0,84,1077	0/0:18,0:17:30.80:0,31,187	0/0:30,1:31:80.58:0,81,1104	0/0:23,0:22:62.39:0,62,836	0/0:28,0:25:70.66:0,71,962	0/0:31,0:31:54.63:0,55,783	1/1:12,3:13:17.75:155,18,0	0/0:20,1:18:14.50:0,15,543	0/0:20,0:19:46.55:0,47,590	0/0:50,0:43:99:0,106,1444	0/0:26,0:24:69.16:0,69,914	0/0:20,0:19:40.32:0,40,357	0/0:33,0:32:24.73:0,25,242	0/0:28,1:28:56.97:0,57,682	0/0:19,0:19:52.60:0,53,699	0/0:21,0:19:47.87:0,48,635	0/0:5,0:5:14.41:0,14,178
chr10	71604728	.	T	TG	218.27	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.936;DP=747;FS=5.075;HRun=1;HaplotypeScore=105.8721;InbreedingCoeff=0.9526;MQ=57.50;MQ0=40;MQRankSum=0.670;QD=6.06;ReadPosRankSum=-0.102;VQSLOD=0.4023;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,15:18:16.06:229,16,0	0/0:6,0:6:18.02:0,18,203	0/0:48,0:18:46.80:0,47,578	0/0:39,0:18:46.29:0,46,528	0/0:22,0:23:48.91:0,49,670	0/0:34,0:33:86.56:0,87,1121	0/0:29,0:29:47.02:0,47,901	0/0:51,0:43:99:0,116,1501	0/0:29,0:29:72.16:0,72,933	0/0:30,0:28:33.18:0,33,699	0/0:18,0:18:33.21:0,33,365	0/0:33,0:32:86.84:0,87,1077	0/0:18,0:17:41.37:0,41,340	0/0:30,0:30:84.10:0,84,1091	0/0:23,0:23:63.14:0,63,820	0/0:28,0:25:72.17:0,72,948	0/0:31,0:31:54.16:0,54,764	1/1:15,0:13:10.74:102,11,0	0/0:20,0:18:15.90:0,16,553	0/0:19,0:18:48.08:0,48,599	0/0:48,0:41:99:0,103,1365	0/0:27,0:25:69.16:0,69,880	0/0:20,0:19:44.82:0,45,426	0/0:33,0:32:31.70:0,32,368	0/0:29,0:28:57.14:0,57,719	0/0:18,0:18:54.11:0,54,698	0/0:20,0:19:49.38:0,49,639	0/0:5,0:5:15.02:0,15,186
chr10	71604892	.	TA	T	2792.12	PASS	AB=0.545;AC=19;AF=0.339;AN=56;BaseQRankSum=8.010;DP=570;FS=10.314;HRun=12;HaplotypeScore=65.0600;InbreedingCoeff=0.9087;MQ=61.50;MQ0=14;MQRankSum=0.185;QD=13.69;ReadPosRankSum=6.102;VQSLOD=2.9604;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:30:58.45:427,58,0	1/1:2,16:18:11.38:271,11,0	0/0:19,0:6:12.67:0,13,89	0/0:8,0:4:7.96:0,8,45	0/0:27,0:28:74.98:0,75,744	0/0:19,0:19:41.67:0,42,401	0/0:24,0:24:30.87:0,31,483	0/0:32,2:34:59.86:0,60,558	0/0:14,0:13:27.05:0,27,274	1/1:2,18:21:55.82:420,56,0	1/1:5,15:21:28.58:288,29,0	0/0:21,2:23:21.85:0,22,398	1/1:2,11:13:20.87:163,21,0	0/0:20,0:20:38.55:0,39,337	0/0:25,0:23:57.98:0,58,569	0/0:16,0:16:33.04:0,33,322	1/1:4,22:26:29.50:411,29,0	1/1:2,15:17:35.85:279,36,0	0/0:19,0:19:54.10:0,54,543	0/0:24,0:24:33.93:0,34,506	0/0:13,0:13:33.07:0,33,335	0/0:13,0:13:13.12:0,13,310	0/1:3,15:18:6.77:138,0,7	1/1:1,18:20:41.51:324,42,0	1/1:2,17:20:37.89:285,38,0	0/0:19,1:23:24.44:0,24,384	0/0:28,0:27:56.41:0,56,525	0/0:14,0:14:33.04:0,33,325
chr10	71611138	.	AGTGTGTGTGTGTGTGTGTGT	A	1747.06	PASS	AB=0.762;AC=7;AF=0.135;AN=52;BaseQRankSum=6.692;DP=560;FS=5.379;HRun=0;HaplotypeScore=259.6011;InbreedingCoeff=0.6187;MQ=64.90;MQ0=13;MQRankSum=-6.019;QD=19.20;ReadPosRankSum=-1.545;VQSLOD=1.7543;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:28:24.08:0,24,1197	0/0:3,0:3:6.02:0,6,490	./.	./.	0/0:18,0:18:24.08:0,24,1727	0/0:20,0:20:30.40:0,30,2129	0/0:20,0:20:24.08:0,24,1584	0/0:20,0:20:18.05:0,18,745	0/0:20,0:19:24.08:0,24,1850	0/0:22,0:22:36.12:0,36,2118	0/0:6,0:6:3.01:0,3,238	0/0:27,0:29:60.21:0,60,4441	1/1:21,8:28:24.08:1276,24,0	0/0:24,0:24:30.10:0,30,2491	0/0:23,0:23:30.10:0,30,1905	0/0:22,0:20:30.10:0,30,2027	0/0:26,0:26:33.05:0,33,1824	0/1:11,0:16:45.91:46,0,74	0/0:7,0:7:3.01:0,3,222	0/0:16,0:16:33.11:0,33,2101	0/0:24,0:24:15.05:0,15,1037	0/0:17,0:19:17.28:0,17,1411	1/1:9,8:17:12:398,12,0	1/1:19,10:29:3.01:159,3,0	0/0:17,0:23:7.63:0,8,441	0/0:19,0:19:30.10:0,30,2326	0/0:26,0:25:39.12:0,39,2762	0/0:12,0:11:21.07:0,21,1528
chr10	71611620	.	GT	G	662.46	PASS	AB=0.857;AC=18;AF=0.321;AN=56;BaseQRankSum=3.695;DP=634;FS=3.157;HRun=17;HaplotypeScore=93.2604;InbreedingCoeff=0.1541;MQ=72.40;MQ0=2;MQRankSum=1.436;QD=2.15;ReadPosRankSum=4.484;VQSLOD=-0.3576;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:33:25.77:89,26,0	0/1:9,5:14:56.49:66,0,56	0/0:38,0:20:12.79:0,13,97	0/1:14,0:10:3.67:4,0,18	0/1:21,3:26:48.91:49,0,126	0/0:17,0:17:26.91:0,27,210	0/1:21,2:24:7.37:7,0,283	0/0:22,0:27:20.48:0,20,273	0/0:16,0:16:32.09:0,32,254	1/1:16,9:28:11.78:140,12,0	1/1:12,7:23:33.95:178,34,0	0/0:15,2:17:7.09:0,7,140	0/0:13,0:22:32.07:0,32,191	0/0:13,2:24:3.21:0,3,123	0/0:28,0:29:31.65:0,32,346	0/0:16,2:19:1.51:0,2,205	1/1:10,12:23:14.61:134,15,0	0/0:9,0:25:21.09:0,21,112	0/1:11,1:17:19.90:20,0,101	0/1:25,3:28:14.58:15,0,160	0/1:15,1:16:13.22:13,0,71	0/1:16,4:20:17.49:17,0,147	0/0:10,0:24:18.62:0,19,110	0/0:20,0:20:34.67:0,35,197	0/1:4,14:22:22.60:99,0,23	0/1:17,2:20:2.80:3,0,81	0/0:32,2:34:46.37:0,46,405	0/0:12,1:14:5:0,5,185
chr10	71612104	.	A	AT	3189.86	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-8.385;DP=727;FS=2.872;HRun=8;HaplotypeScore=70.2274;InbreedingCoeff=0.9973;MQ=75.03;MQ0=0;MQRankSum=-2.294;QD=24.73;ReadPosRankSum=0.198;VQSLOD=4.4314;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,35:41:65.77:996,66,0	0/0:10,0:10:27.01:0,27,247	0/0:20,0:22:26.09:0,26,316	0/0:13,0:13:21.45:0,21,189	0/0:34,0:34:98.93:0,99,893	0/0:21,0:21:54.03:0,54,494	0/0:18,0:18:45.02:0,45,412	0/0:36,0:36:89.99:0,90,809	0/0:26,0:26:72.04:0,72,659	0/0:28,0:28:72.01:0,72,653	0/0:25,0:25:68.52:0,69,613	0/0:17,0:17:45.01:0,45,407	1/1:6,21:27:54.16:623,54,0	0/0:25,0:25:66:0,66,599	0/0:33,0:33:84.01:0,84,764	0/0:33,0:33:93.05:0,93,850	0/0:36,0:36:99:0,102,913	0/0:19,0:19:53.97:0,54,485	0/0:27,0:27:68.97:0,69,619	0/0:25,0:25:56.94:0,57,512	0/0:29,0:29:69.01:0,69,627	0/0:25,0:25:66.03:0,66,604	1/1:2,27:29:75.22:866,75,0	1/1:1,31:32:75.22:866,75,0	0/0:24,0:24:69.03:0,69,631	0/0:29,0:29:71.96:0,72,647	0/0:21,1:23:21.45:0,21,438	0/0:20,0:20:45.02:0,45,412
chr10	71612427	.	ATTTG	A	911.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.659;DP=718;FS=4.530;HRun=0;HaplotypeScore=117.6226;InbreedingCoeff=0.9977;MQ=84.60;MQ0=1;MQRankSum=-2.151;QD=36.48;ReadPosRankSum=1.938;VQSLOD=3.5811;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,151,3763	0/0:8,0:8:24.08:0,24,615	0/0:25,0:25:54.19:0,54,1286	0/0:27,0:27:60.17:0,60,1422	0/0:29,0:29:87.30:0,87,2208	0/0:29,0:29:81.26:0,81,2007	0/0:21,0:21:63.22:0,63,1605	0/0:40,0:40:99:0,105,2603	0/0:21,0:21:63.22:0,63,1602	0/0:29,0:29:78.27:0,78,2002	0/0:20,0:20:54.19:0,54,1382	0/0:20,0:20:57.20:0,57,1454	0/0:19,0:19:54.19:0,54,1369	0/0:27,0:27:72.24:0,72,1789	0/0:27,0:27:78.27:0,78,1999	0/0:21,0:21:60.21:0,60,1522	0/0:30,0:30:72.25:0,72,1804	1/1:3,22:24:57.19:1007,57,0	0/0:25,0:25:72.25:0,72,1820	0/0:37,0:37:99:0,99,2481	0/0:25,0:25:72.25:0,72,1838	0/0:24,0:24:66.23:0,66,1678	0/0:28,0:28:78.27:0,78,1998	0/0:17,0:17:51.18:0,51,1309	0/0:21,0:21:60.21:0,60,1540	0/0:42,0:42:99:0,117,2982	0/0:19,0:19:48.16:0,48,1228	0/0:11,0:11:33.11:0,33,847
chr10	71613279	.	T	TA	1712.51	PASS	AB=0.917;AC=9;AF=0.161;AN=56;BaseQRankSum=-6.941;DP=647;FS=3.010;HRun=9;HaplotypeScore=65.6167;InbreedingCoeff=0.8905;MQ=81.61;MQ0=0;MQRankSum=-4.312;QD=19.03;ReadPosRankSum=-0.093;VQSLOD=4.0412;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:60.16:658,60,0	0/1:10,1:11:3.19:3,0,204	0/0:21,0:21:37.62:0,38,304	0/0:17,0:18:35.82:0,36,258	0/0:25,0:25:71.97:0,72,621	0/0:31,0:31:80.93:0,81,693	0/0:28,0:28:77.95:0,78,669	0/0:31,0:31:74.92:0,75,647	0/0:22,0:22:65.96:0,66,568	0/0:23,0:23:35.49:0,35,488	0/0:26,0:27:65.01:0,65,550	0/0:20,2:22:20.81:0,21,410	1/1:0,15:16:42.11:458,42,0	0/0:25,0:25:59.97:0,60,517	0/0:27,0:27:80.97:0,81,699	0/0:22,0:22:56.96:0,57,491	0/0:35,0:35:83.83:0,84,706	0/0:29,0:29:68.95:0,69,599	0/0:18,0:18:35.95:0,36,308	0/0:25,1:27:40.79:0,41,563	0/0:22,0:22:56.98:0,57,494	0/0:15,0:15:32.99:0,33,286	1/1:1,11:13:30.80:315,31,0	1/1:3,19:22:19.07:439,19,0	0/0:32,0:32:83.95:0,84,729	0/0:28,0:28:74.98:0,75,651	0/0:23,0:22:59.98:0,60,521	0/0:6,0:6:8.96:0,9,78
chr10	71614999	.	CTT	C	2024.52	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.215;DP=572;FS=0.000;HRun=10;HaplotypeScore=86.4056;InbreedingCoeff=0.9956;MQ=82.09;MQ0=0;MQRankSum=-1.631;QD=23.27;ReadPosRankSum=4.052;VQSLOD=3.2716;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:63.13:688,63,0	0/0:12,0:12:30.09:0,30,448	0/0:26,0:26:22.72:0,23,374	0/0:18,0:15:23.99:0,24,283	0/0:22,0:22:63.18:0,63,911	0/0:19,0:19:51.17:0,51,805	0/0:9,0:9:21.07:0,21,333	0/0:27,0:27:65.68:0,66,930	0/0:13,0:13:33.10:0,33,482	0/0:20,0:21:47.63:0,48,679	0/0:30,0:30:75.20:0,75,1067	0/0:15,0:15:42.14:0,42,663	1/1:4,22:26:60.15:668,60,0	0/0:17,0:17:48.15:0,48,720	0/0:20,0:20:51.17:0,51,790	0/0:8,0:8:21.06:0,21,292	0/0:23,0:23:60.19:0,60,907	0/0:27,0:27:75.23:0,75,1147	0/0:22,0:23:53.63:0,54,735	0/0:23,0:23:63.17:0,63,907	0/0:18,0:18:39.09:0,39,535	0/0:17,0:17:45.13:0,45,672	1/1:3,19:22:51.12:567,51,0	1/1:1,9:12:24.06:262,24,0	0/0:30,0:31:89.63:0,90,1307	0/0:22,0:22:63.06:0,63,862	0/0:30,0:30:81.22:0,81,1171	0/0:13,0:14:41.61:0,42,604
chr10	71617106	.	TTCA	T	2753.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=10.200;DP=820;FS=5.619;HRun=0;HaplotypeScore=114.8643;InbreedingCoeff=0.9980;MQ=78.98;MQ0=0;MQRankSum=-4.636;QD=42.35;ReadPosRankSum=1.947;VQSLOD=5.0183;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,62:65:99:2848,172,0	0/0:16,0:16:48.15:0,48,1008	0/0:17,0:17:47.75:0,48,933	0/0:25,0:25:69.16:0,69,1349	0/0:26,0:26:78.25:0,78,1690	0/0:29,0:29:84.27:0,84,1860	0/0:33,0:33:93.32:0,93,2106	0/0:26,0:26:78.25:0,78,1671	0/0:25,0:25:75.24:0,75,1657	0/0:38,0:38:99:0,114,2505	0/0:23,0:23:69.22:0,69,1502	0/0:42,0:42:99:0,114,2454	0/0:32,0:32:96.31:0,96,2112	0/0:28,0:28:78.25:0,78,1724	0/0:40,0:40:99:0,120,2711	0/0:37,0:37:99:0,108,2448	0/0:22,0:22:63.22:0,63,1428	0/0:20,0:20:57.20:0,57,1292	0/0:32,0:32:93.32:0,93,2083	0/0:20,0:20:60.19:0,60,1312	0/0:44,0:44:99:0,129,2816	0/0:44,0:44:99:0,132,2931	0/0:20,0:20:60.19:0,60,1316	0/0:32,0:32:93.32:0,93,2108	0/0:25,0:25:72.24:0,72,1582	0/0:26,0:26:72.25:0,72,1632	0/0:25,0:25:72.22:0,72,1523	0/0:8,0:8:24.06:0,24,497
chr10	71618642	.	TCA	T	104.54	PASS	AC=16;AF=0.533;AN=30;BaseQRankSum=2.565;DP=529;FS=0.000;HRun=0;HaplotypeScore=66.0309;InbreedingCoeff=0.5414;MQ=78.44;MQ0=16;MQRankSum=1.118;QD=0.63;ReadPosRankSum=0.767;VQSLOD=1.3479;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,5:24:4.25:34,4,0	./.	./.	./.	0/0:11,0:11:5.88:0,6,54	./.	./.	./.	./.	0/0:15,0:14:8.98:0,9,87	./.	0/0:18,0:17:11.86:0,12,115	./.	0/0:17,0:15:8.99:0,9,85	0/0:25,0:24:6.02:0,6,82	./.	./.	./.	./.	1/1:18,4:21:3:31,3,0	1/1:35,0:34:2.99:24,3,0	0/0:16,0:15:6:0,6,63	1/1:13,0:11:2.84:14,3,0	1/1:26,0:32:5.68:28,6,0	1/1:7,0:7:0.68:1,1,0	1/1:18,0:17:6.43:26,6,0	1/1:11,4:15:5.80:62,6,0	0/0:4,0:3:0:0,0,0
chr10	71620930	.	ACAG	A	7424.30	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.581;DP=701;FS=0.710;HRun=0;HaplotypeScore=103.1231;InbreedingCoeff=0.9916;MQ=75.62;MQ0=0;MQRankSum=-3.455;QD=29.23;ReadPosRankSum=2.022;VQSLOD=5.0165;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,20:28:51.17:742,51,0	1/1:4,9:13:20.90:300,21,0	0/0:18,0:18:30.09:0,30,549	0/0:22,0:22:23.46:0,23,423	0/0:11,0:11:24.06:0,24,441	0/0:23,0:23:54.19:0,54,1073	0/0:29,0:29:81.28:0,81,1592	0/0:26,0:26:43.94:0,44,872	0/0:31,0:31:84.25:0,84,1646	1/1:10,20:30:57.19:835,57,0	1/1:2,10:12:21.07:300,21,0	0/0:37,0:37:99:0,108,2131	1/1:7,32:39:90.17:1325,90,0	0/0:30,0:30:81.28:0,81,1631	0/0:28,0:28:72.25:0,72,1445	0/0:25,0:25:60.21:0,60,1206	1/1:2,44:46:99:1723,117,0	1/1:3,29:32:54.18:795,54,0	0/0:18,0:18:24.08:0,24,481	0/0:14,0:14:36.12:0,36,734	0/0:69,0:69:99:0,154,3066	0/0:11,0:11:24.08:0,24,496	1/1:2,9:11:18.06:254,18,0	1/1:5,22:27:48.16:707,48,0	1/1:1,15:16:30.10:442,30,0	0/0:24,0:24:42.14:0,42,867	0/0:26,0:26:72.22:0,72,1398	0/0:5,0:5:12.04:0,12,249
chr10	71624330	.	A	AG	6106.87	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.499;DP=719;FS=1.533;HRun=1;HaplotypeScore=79.8252;InbreedingCoeff=0.9981;MQ=81.37;MQ0=0;MQRankSum=-2.671;QD=40.71;ReadPosRankSum=2.517;VQSLOD=5.4806;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,58:60:99:2381,160,0	0/0:14,0:14:42.14:0,42,545	0/0:22,0:21:46.79:0,47,649	0/0:24,0:24:66.20:0,66,820	0/0:25,0:25:72.21:0,72,919	0/0:25,0:25:72.23:0,72,935	0/0:25,0:25:75.23:0,75,959	0/0:37,0:37:99:0,111,1429	0/0:24,0:24:72.21:0,72,917	0/0:32,0:32:93.30:0,93,1208	0/0:20,0:20:60.18:0,60,765	0/0:22,0:22:60.18:0,60,765	1/1:2,21:24:60.20:893,60,0	0/0:23,0:23:69.22:0,69,896	0/0:31,0:31:90.28:0,90,1153	0/0:28,0:28:84.26:0,84,1077	0/0:31,0:31:90.29:0,90,1169	1/1:0,24:24:72.24:1079,72,0	0/0:19,0:19:54.18:0,54,701	0/0:26,0:26:75.22:0,75,946	0/0:47,0:47:99:0,138,1776	0/0:19,0:19:54.15:0,54,672	1/1:0,27:27:75.25:1124,75,0	1/1:1,14:15:42.14:629,42,0	0/0:24,0:24:72.23:0,72,935	0/0:25,0:25:72.23:0,72,935	0/0:20,0:19:60.19:0,60,777	0/0:6,0:6:18.06:0,18,233
chr10	71624991	.	G	GT	1033.37	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.467;DP=636;FS=3.164;HRun=1;HaplotypeScore=96.1745;InbreedingCoeff=0.9986;MQ=90.51;MQ0=0;MQRankSum=-10.967;QD=15.42;ReadPosRankSum=0.332;VQSLOD=3.5533;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:35.62:257,36,0	0/0:11,0:11:33.11:0,33,461	0/0:28,0:28:78.07:0,78,1022	0/0:27,0:27:66.15:0,66,885	0/0:17,0:17:51.16:0,51,695	0/0:19,0:19:57.14:0,57,744	0/0:32,0:32:93.30:0,93,1281	0/0:27,0:27:69.23:0,69,963	0/0:23,0:23:69.21:0,69,934	0/0:22,0:22:66.22:0,66,909	0/0:14,0:14:39.13:0,39,545	0/0:31,0:31:90.29:0,90,1237	1/1:1,20:21:61.99:406,62,0	0/0:33,0:33:99:0,99,1383	0/0:31,0:31:93.31:0,93,1301	0/0:28,0:28:84.28:0,84,1175	0/0:31,0:31:93.31:0,93,1301	0/0:26,0:26:75.25:0,75,1046	0/0:22,0:22:63.21:0,63,878	0/0:13,0:13:39.13:0,39,544	0/0:38,0:38:99:0,114,1595	0/0:18,0:18:51.17:0,51,713	1/1:2,17:19:44.26:328,44,0	1/1:2,9:11:20.81:202,21,0	0/0:20,0:20:57.18:0,57,781	0/0:21,0:21:63.21:0,63,881	0/0:25,0:23:75.23:0,75,1025	0/0:12,0:12:36.12:0,36,504
chr10	71624994	.	G	GT	448.59	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.696;DP=621;FS=1.826;HRun=0;HaplotypeScore=96.5585;InbreedingCoeff=0.9932;MQ=90.39;MQ0=0;MQRankSum=-11.322;QD=7.24;ReadPosRankSum=1.578;VQSLOD=3.6593;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:32.28:163,32,0	0/0:11,0:11:33.11:0,33,461	0/0:27,0:27:72.19:0,72,969	0/0:25,0:26:65.68:0,66,868	0/0:19,0:19:48.16:0,48,671	0/0:20,0:20:57.19:0,57,795	0/0:26,0:26:78.25:0,78,1074	0/0:27,0:27:69.23:0,69,962	0/0:23,0:23:66.22:0,66,923	0/0:19,0:19:54.18:0,54,752	0/0:15,0:15:42.14:0,42,587	0/0:30,0:30:90.27:0,90,1223	1/1:0,20:20:52.58:221,53,0	0/0:31,0:31:93.31:0,93,1300	0/0:30,0:30:90.29:0,90,1238	0/0:28,0:28:84.28:0,84,1175	0/0:31,0:31:93.31:0,93,1301	0/0:25,0:25:72.24:0,72,1007	0/0:23,0:23:66.22:0,66,922	0/0:13,0:13:36.12:0,36,503	0/0:38,0:38:99:0,114,1594	0/0:19,0:19:54.17:0,54,737	1/1:0,17:17:32.52:146,33,0	1/1:0,9:9:13.37:77,13,0	0/0:19,0:19:54.18:0,54,755	0/0:22,0:22:63.20:0,63,862	0/0:25,0:23:75.20:0,75,1010	0/0:12,0:12:36.12:0,36,504
chr10	71624996	.	TGGAGGA	T	1997.39	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.630;DP=647;FS=1.143;HRun=0;HaplotypeScore=154.5424;InbreedingCoeff=0.9953;MQ=90.44;MQ0=0;MQRankSum=-11.523;QD=32.74;ReadPosRankSum=2.563;VQSLOD=3.5211;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:36.07:515,36,0	0/0:11,0:11:30.10:0,30,1066	0/0:27,0:27:74.06:0,74,2437	0/0:28,0:28:78.23:0,78,2283	0/0:22,0:22:66.23:0,66,2052	0/0:22,0:22:66.21:0,66,2032	0/0:25,0:25:75.26:0,75,2706	0/0:25,0:25:69.24:0,69,2164	0/0:24,0:24:72.25:0,72,2544	0/0:23,0:23:69.24:0,69,2229	0/0:15,0:15:45.15:0,45,1595	0/0:30,0:30:90.31:0,90,3220	1/1:0,20:20:60.20:904,60,0	0/0:33,0:33:99:0,99,3394	0/0:30,0:30:87.30:0,87,3088	0/0:29,0:29:84.29:0,84,2996	0/0:31,0:31:93.32:0,93,3354	0/0:24,0:24:72.25:0,72,2598	0/0:23,0:23:66.23:0,66,2194	0/0:14,0:14:42.14:0,42,1444	0/0:41,0:41:99:0,123,4217	0/0:23,0:23:69.24:0,69,2179	1/1:0,16:16:36.12:522,36,0	1/1:0,9:9:15.05:216,15,0	0/0:22,0:22:66.23:0,66,2208	0/0:27,0:27:81.28:0,81,2500	0/0:25,0:23:75.26:0,75,2537	0/0:12,0:12:36.12:0,36,1319
chr10	71630280	.	A	AAGGGAGG	13802.50	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-9.197;DP=760;FS=0.000;HRun=0;HaplotypeScore=162.7324;InbreedingCoeff=0.9968;MQ=81.35;MQ0=1;MQRankSum=-15.763;QD=88.48;ReadPosRankSum=2.676;VQSLOD=5.7828;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:45:87.30:3391,87,0	1/1:0,12:12:32.95:1379,33,0	0/0:35,0:35:99:0,102,2202	0/0:40,0:39:82.77:0,83,2538	0/0:27,0:27:78.25:0,78,1999	0/0:28,0:28:84.27:0,84,2228	0/0:23,0:23:66.23:0,66,1801	0/0:30,0:30:87.28:0,87,2127	0/0:40,0:40:99:0,120,3174	1/1:3,25:29:78.27:3109,78,0	1/1:1,15:19:39.13:1555,39,0	0/0:23,0:23:69.22:0,69,1869	0/0:36,0:36:99:0,108,2749	0/0:31,0:31:90.23:0,90,2240	0/0:30,0:30:90.28:0,90,2365	0/0:22,0:22:63.21:0,63,1636	1/1:0,15:18:39.13:1607,39,0	1/1:1,11:16:27.09:1130,27,0	0/0:25,0:25:72.23:0,72,1872	0/0:27,0:27:75.24:0,75,1947	0/0:38,0:38:99:0,114,3163	0/0:30,0:30:90.25:0,90,2197	0/0:25,0:25:75.21:0,75,1661	0/0:20,0:20:60.21:0,60,1641	1/1:0,17:17:39.13:1630,39,0	0/0:38,0:38:99:0,114,2997	0/0:31,0:31:90.29:0,90,2386	0/0:5,0:5:15.05:0,15,419
chr10	71631881	.	TC	T	450.49	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.972;DP=671;FS=1.072;HRun=1;HaplotypeScore=63.7860;InbreedingCoeff=0.9944;MQ=89.82;MQ0=0;MQRankSum=-1.941;QD=22.52;ReadPosRankSum=0.759;VQSLOD=3.6733;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1865	0/0:7,0:7:21.07:0,21,326	0/0:28,0:28:78.25:0,78,1194	0/0:25,0:25:75.02:0,75,1088	0/0:24,0:24:72.24:0,72,1139	0/0:28,0:28:84.18:0,84,1261	0/0:20,0:20:60.19:0,60,935	0/0:37,0:37:99:0,111,1672	0/0:20,0:20:60.19:0,60,933	0/0:27,0:27:81.28:0,81,1293	0/0:16,0:16:48.16:0,48,767	0/0:33,0:33:99:0,99,1532	0/0:24,0:24:72.21:0,72,1100	0/0:29,0:29:87.27:0,87,1344	0/0:30,0:30:90.28:0,90,1392	0/0:25,0:25:75.24:0,75,1171	0/0:34,0:34:99:0,102,1577	1/1:0,20:20:39.13:545,39,0	0/0:9,0:9:27.07:0,27,388	0/0:25,0:25:75.26:0,75,1195	0/0:24,0:24:72.21:0,72,1100	0/0:17,0:17:51.17:0,51,804	0/0:17,0:17:51.16:0,51,791	0/0:26,0:26:78.25:0,78,1223	0/0:26,0:25:78.24:0,78,1201	0/0:23,0:22:69.24:0,69,1102	0/0:28,0:28:84.29:0,84,1336	0/0:10,0:10:30.10:0,30,469
chr10	71633029	.	T	TCTTCC	11634.15	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=3.644;DP=633;FS=2.104;HRun=0;HaplotypeScore=155.5499;InbreedingCoeff=0.9981;MQ=78.24;MQ0=0;MQRankSum=-12.427;QD=83.10;ReadPosRankSum=-3.032;VQSLOD=5.6744;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,26:36:83.11:2661,83,0	1/1:1,10:11:33.11:1065,33,0	0/0:25,0:24:69.23:0,69,1442	0/0:22,0:21:48.15:0,48,986	0/0:29,0:29:87.30:0,87,1921	0/0:25,0:24:75.24:0,75,1631	0/0:14,0:14:42.14:0,42,937	0/0:39,0:39:99:0,108,2327	0/0:27,0:27:81.26:0,81,1763	1/1:6,18:24:72.25:2271,72,0	1/1:3,19:22:60.16:1756,60,0	0/0:17,0:17:51.18:0,51,1137	0/0:28,0:28:84.29:0,84,1873	0/0:19,0:19:57.20:0,57,1270	0/0:28,0:28:84.27:0,84,1813	0/0:28,0:28:78.27:0,78,1739	1/1:7,8:16:42.05:1192,42,0	1/1:1,6:7:18.06:581,18,0	0/0:13,0:13:39.09:0,39,822	0/0:25,0:25:72.25:0,72,1587	0/0:18,0:18:51.16:0,51,1094	0/0:29,0:29:87.30:0,87,1939	0/0:24,0:24:69.24:0,69,1538	0/0:19,0:19:48.16:0,48,1071	1/1:7,16:24:72.20:2109,72,0	0/0:23,0:23:63.21:0,63,1365	0/0:33,0:33:99:0,99,2187	0/0:8,0:8:24.08:0,24,535
chr10	71633044	.	C	CGAT	6833.94	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-0.620;DP=701;FS=0.384;HRun=0;HaplotypeScore=171.7471;InbreedingCoeff=0.9756;MQ=66.99;MQ0=2;MQRankSum=-5.463;QD=23.48;ReadPosRankSum=-2.088;VQSLOD=4.3144;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:41:35.93:420,36,0	1/1:10,0:14:20.99:224,21,0	0/0:29,0:21:21.07:0,21,285	0/0:25,0:19:18.06:0,18,247	0/0:29,0:29:75.24:0,75,1013	0/0:26,0:25:53.33:0,53,706	0/0:22,0:22:48.12:0,48,638	0/0:31,0:31:34.88:0,35,437	0/0:34,0:34:84.24:0,84,1104	1/1:27,0:32:44.51:568,45,0	1/1:18,0:21:15.05:206,15,0	1/1:6,19:25:57.20:1125,57,0	1/1:9,22:31:63.22:1241,63,0	0/0:21,0:21:36.12:0,36,492	0/0:31,0:31:72.21:0,72,955	0/0:33,0:33:75.25:0,75,1028	1/1:18,0:20:21.07:277,21,0	1/1:4,3:7:12.04:237,12,0	0/0:18,0:18:24.05:0,24,296	0/0:22,0:22:36.12:0,36,494	0/0:21,0:21:54.18:0,54,741	1/1:10,16:26:6.98:847,7,0	1/1:9,14:23:39.13:769,39,0	1/1:8,14:23:27.09:533,27,0	1/1:21,0:28:30.08:387,30,0	0/0:25,0:25:48.16:0,48,659	0/0:36,0:36:75.23:0,75,1005	0/0:6,0:7:15.02:0,15,186
chr10	71634110	.	GCTGT	G	4999.34	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.413;DP=658;FS=0.405;HRun=0;HaplotypeScore=108.1387;InbreedingCoeff=0.9906;MQ=74.72;MQ0=1;MQRankSum=-1.831;QD=30.86;ReadPosRankSum=2.760;VQSLOD=4.9594;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,30:38:75.17:1184,75,0	1/1:1,11:12:21.07:348,21,0	0/0:27,0:21:39.13:0,39,803	0/0:26,0:25:39.11:0,39,868	0/0:24,0:24:60.19:0,60,1407	0/0:29,0:29:78.27:0,78,1917	0/0:23,0:23:51.18:0,51,1249	0/0:30,0:30:63.22:0,63,1533	0/0:14,0:14:36.12:0,36,885	1/1:10,19:29:57.17:911,57,0	1/1:6,11:17:27.09:447,27,0	0/0:27,0:27:69.22:0,69,1621	0/0:20,0:20:57.20:0,57,1392	0/0:23,0:23:51.18:0,51,1222	0/0:36,0:36:90.31:0,90,2188	0/0:28,0:28:75.23:0,75,1744	1/1:12,17:29:39.13:647,39,0	1/1:2,15:17:42.14:696,42,0	0/0:20,0:20:33.09:0,33,707	0/0:24,0:24:57.20:0,57,1397	0/0:26,0:26:66.23:0,66,1571	0/0:25,1:26:10.49:0,10,1320	0/0:22,0:22:48.16:0,48,1174	0/0:19,0:19:45.15:0,45,1106	1/1:2,18:20:48.12:766,48,0	0/0:19,0:19:27.09:0,27,664	0/0:23,0:21:60.21:0,60,1452	0/0:10,0:10:24.08:0,24,521
chr10	71636899	.	G	GTTC	8044.11	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-0.594;DP=671;FS=1.185;HRun=0;HaplotypeScore=97.6437;InbreedingCoeff=0.9526;MQ=78.87;MQ0=0;MQRankSum=-4.705;QD=54.72;ReadPosRankSum=1.231;VQSLOD=6.8711;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,47:49:99:2541,114,0	1/1:2,9:12:24.08:547,24,0	0/0:19,0:19:45.08:0,45,695	0/0:13,0:13:30.10:0,30,493	0/0:18,0:18:54.18:0,54,911	0/0:24,0:23:72.23:0,72,1197	0/0:25,0:25:75.24:0,75,1216	0/0:27,0:27:72.23:0,72,1174	0/0:35,0:35:99:0,105,1790	1/1:4,11:15:45.15:957,45,0	1/1:3,15:18:42.14:941,42,0	0/0:28,0:28:84.27:0,84,1389	0/0:31,0:31:84.27:0,84,1394	0/0:31,0:31:93.32:0,93,1582	0/0:23,0:23:69.24:0,69,1173	0/0:25,0:25:72.23:0,72,1192	1/1:0,21:22:57.13:1262,57,0	1/1:1,12:14:30.10:692,30,0	0/0:21,0:21:60.21:0,60,1020	0/0:21,0:21:57.19:0,57,965	0/0:55,0:55:99:0,153,2538	0/0:24,0:24:66.21:0,66,1073	0/0:18,0:18:54.16:0,54,888	0/0:23,0:23:69.24:0,69,1172	1/1:1,15:17:48.16:1104,48,0	0/0:25,1:26:0.02:0,0,1043	0/0:29,0:29:81.26:0,81,1338	0/0:8,0:8:24.06:0,24,382
chr10	71638529	.	T	TTTAG	8212.34	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.782;DP=661;FS=7.247;HRun=0;HaplotypeScore=117.1203;InbreedingCoeff=0.9968;MQ=59.79;MQ0=0;MQRankSum=-13.774;QD=56.64;ReadPosRankSum=-3.789;VQSLOD=5.2768;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,29:36:66.23:1591,66,0	1/1:3,2:5:15.05:351,15,0	0/0:30,0:24:60.21:0,60,1097	0/0:32,0:29:78.26:0,78,1428	0/0:19,0:19:54.17:0,54,993	0/0:21,0:21:63.21:0,63,1165	0/0:20,0:20:48.16:0,48,909	0/0:28,0:28:81.26:0,81,1502	0/0:23,0:23:69.22:0,69,1243	1/1:3,19:24:57.20:1521,57,0	1/1:3,10:14:29.95:617,30,0	0/0:28,0:28:84.29:0,84,1591	0/0:30,0:30:84.28:0,84,1565	0/0:31,0:31:93.30:0,93,1733	0/0:32,0:32:90.29:0,90,1666	0/0:26,0:26:78.27:0,78,1470	1/1:4,18:22:54.19:1372,54,0	1/1:5,15:22:45.15:1086,45,0	0/0:23,0:23:60.21:0,60,1128	0/0:16,0:16:48.15:0,48,869	0/0:28,0:28:78.25:0,78,1444	0/0:14,0:14:42.14:0,42,798	0/0:20,0:20:57.20:0,57,1071	0/0:25,0:25:75.21:0,75,1387	1/1:2,20:22:63.22:1674,63,0	0/0:28,0:28:81.27:0,81,1486	0/0:32,0:32:96.29:0,96,1756	0/0:10,0:10:27.09:0,27,513
chr10	71640942	.	TG	T	653.77	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.467;DP=713;FS=0.814;HRun=5;HaplotypeScore=69.6722;InbreedingCoeff=0.9952;MQ=85.94;MQ0=0;MQRankSum=-3.112;QD=26.15;ReadPosRankSum=1.065;VQSLOD=3.2615;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1341	0/0:11,0:11:30.07:0,30,378	0/0:20,0:20:51.15:0,51,674	0/0:30,0:30:81.24:0,81,1076	0/0:38,0:38:99:0,102,1330	0/0:20,0:20:60.19:0,60,805	0/0:32,0:32:96.29:0,96,1279	0/0:31,0:31:87.29:0,87,1185	0/0:23,0:23:69.20:0,69,898	0/0:22,0:22:66.22:0,66,897	0/0:20,0:20:51.13:0,51,647	0/0:20,0:20:60.19:0,60,806	0/0:29,0:29:81.26:0,81,1092	0/0:29,0:29:84.27:0,84,1116	0/0:32,0:32:96.30:0,96,1283	0/0:33,0:33:96.29:0,96,1268	0/0:22,0:22:63.20:0,63,842	1/1:1,24:25:66.19:749,66,0	0/0:18,0:18:42.13:0,42,558	0/0:12,0:12:33.10:0,33,429	0/0:33,0:33:93.29:0,93,1246	0/0:19,0:19:51.15:0,51,672	0/0:18,0:18:42.13:0,42,558	0/0:42,0:42:99:0,117,1582	0/0:27,0:27:75.23:0,75,990	0/0:28,0:28:78.24:0,78,1038	0/0:36,0:36:99:0,102,1379	0/0:7,0:7:21.07:0,21,287
chr10	71641988	.	AAAAG	A	294.80	PASS	AB=0.606;AC=1;AF=0.018;AN=56;BaseQRankSum=3.781;DP=679;FS=2.485;HRun=0;HaplotypeScore=126.4813;InbreedingCoeff=0.4640;MQ=70.09;MQ0=2;MQRankSum=0.150;QD=14.74;ReadPosRankSum=-1.116;VQSLOD=3.4539;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:56.96:0,57,1245	0/0:12,0:12:33.11:0,33,813	0/0:49,0:36:11.03:0,11,474	0/0:37,0:21:10.57:0,11,287	0/0:21,0:21:54.14:0,54,1076	0/0:33,0:33:84.25:0,84,1901	0/0:21,0:21:45.12:0,45,926	0/0:40,0:40:84.24:0,84,1610	0/0:19,0:19:42.13:0,42,954	0/0:19,0:19:48.10:0,48,1093	0/0:20,0:20:45.14:0,45,975	0/0:22,0:22:51.15:0,51,1128	0/0:10,0:10:24.08:0,24,579	0/0:19,0:19:39.12:0,39,873	0/0:26,0:26:72.24:0,72,1718	0/0:28,0:28:66.20:0,66,1469	0/0:29,0:29:72.13:0,72,1385	0/1:7,13:20:2.41:369,0,2	0/0:28,0:28:63.15:0,63,1161	0/0:30,0:30:78.24:0,78,1758	0/0:15,0:15:39.13:0,39,974	0/0:14,0:14:33.10:0,33,678	0/0:18,0:18:48.15:0,48,1040	0/0:20,0:20:51.12:0,51,1116	0/0:24,0:24:60.20:0,60,1403	0/0:27,0:27:66.22:0,66,1515	0/0:30,0:30:84.22:0,84,1780	0/0:22,0:22:60.21:0,60,1413
chr10	71642608	.	TG	T	44.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.524;DP=1010;FS=3.441;HRun=2;HaplotypeScore=105.2846;InbreedingCoeff=0.9231;MQ=58.35;MQ0=7;MQRankSum=-1.831;QD=7.34;ReadPosRankSum=-0.619;VQSLOD=0.7206;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:58:99:0,168,2371	0/0:20,0:20:60.20:0,60,895	0/0:57,0:31:75.80:0,76,1057	0/0:47,0:33:70.59:0,71,1109	0/0:28,0:28:84.27:0,84,1202	0/0:22,0:22:63.21:0,63,934	0/0:29,0:29:78.17:0,78,1154	0/0:38,0:37:99:0,111,1609	0/0:44,0:44:99:0,132,1968	0/0:41,0:40:99:0,114,1631	0/0:21,0:21:63.20:0,63,907	0/0:44,0:44:99:0,129,1875	0/0:48,0:47:99:0,131,1904	0/0:36,0:36:99:0,108,1557	0/0:51,0:51:99:0,147,2183	0/0:44,0:44:99:0,126,1858	0/0:36,1:36:99:0,99,1451	1/1:5,1:6:12.02:130,12,0	0/0:16,0:16:48.16:0,48,704	0/0:34,0:34:99:0,99,1443	0/0:66,1:67:99:0,196,2801	0/0:36,0:36:99:0,107,1552	0/0:19,0:19:54.18:0,54,799	0/0:48,0:48:99:0,129,1846	0/0:25,0:24:69.22:0,69,1009	0/0:48,0:48:99:0,144,2123	0/0:33,0:32:96.07:0,96,1314	0/0:11,1:12:9.97:0,10,468
chr10	71642609	.	G	GT	68.94	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=4.798;DP=1018;FS=1.389;HRun=1;HaplotypeScore=106.9638;InbreedingCoeff=0.7249;MQ=58.24;MQ0=7;MQRankSum=-1.503;QD=3.45;ReadPosRankSum=-0.162;VQSLOD=0.0375;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,1:59:99:0,167,2232	0/0:20,0:20:60.20:0,60,832	0/0:59,0:32:74.67:0,75,989	0/0:48,0:34:60.82:0,61,1049	0/0:28,0:28:84.27:0,84,1135	0/0:21,0:21:63.21:0,63,872	0/0:28,0:28:78.26:0,78,1083	0/0:38,1:38:99:0,111,1516	0/0:44,0:44:99:0,132,1835	0/0:39,1:39:99:0,114,1544	0/0:21,0:21:63.19:0,63,855	0/0:44,0:44:99:0,129,1760	0/0:46,1:46:99:0,132,1805	0/0:36,0:36:99:0,108,1478	0/0:52,0:52:99:0,147,2043	0/0:44,0:44:99:0,126,1736	0/0:35,0:34:98.58:0,99,1340	1/1:1,3:6:12.03:155,12,0	0/0:17,0:17:48.16:0,48,666	0/0:34,0:34:99:0,99,1358	0/0:68,1:69:99:0,196,2639	0/0:37,0:37:99:0,108,1473	0/0:19,0:19:54.18:0,54,751	0/0:48,1:49:99:0,132,1776	0/0:25,0:24:69.22:0,69,947	0/0:48,0:48:99:0,144,1992	0/0:33,0:32:90.42:0,90,1221	0/1:14,0:14:1.96:2,0,425
chr10	71642620	.	GA	G	57.46	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.190;DP=1046;FS=0.000;HRun=1;HaplotypeScore=108.7848;InbreedingCoeff=0.9685;MQ=60.38;MQ0=7;MQRankSum=-4.060;QD=11.49;ReadPosRankSum=0.592;VQSLOD=1.7829;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:60:99:0,175,2778	0/0:19,0:19:57.19:0,57,911	0/0:60,0:36:96.12:0,96,1363	0/0:53,1:39:89.25:0,89,1352	0/0:28,0:28:81.28:0,81,1290	0/0:24,0:24:72.25:0,72,1147	0/0:31,0:31:90.20:0,90,1416	0/0:37,0:37:99:0,111,1731	0/0:44,0:44:99:0,129,2033	0/0:42,0:41:99:0,123,1962	0/0:18,0:18:54.18:0,54,861	0/0:44,0:44:99:0,126,1965	0/0:46,0:45:99:0,135,2086	0/0:39,0:39:99:0,117,1860	0/0:51,1:52:99:0,147,2323	0/0:40,0:40:99:0,120,1916	0/0:36,0:36:99:0,99,1555	1/1:0,5:5:12.03:143,12,0	0/0:22,0:22:60.20:0,60,951	0/0:34,0:34:99:0,102,1625	0/0:78,0:78:99:0,205,3277	0/0:37,0:37:99:0,111,1723	0/0:19,0:19:54.17:0,54,831	0/0:51,1:52:99:0,144,2236	0/0:22,0:21:60.20:0,60,959	0/0:54,0:54:99:0,160,2513	0/0:30,0:30:90.29:0,90,1411	0/0:16,1:17:46.97:0,47,720
chr10	71642734	.	A	AGT	3657.81	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=2.536;DP=960;FS=2.330;HRun=0;HaplotypeScore=157.6273;InbreedingCoeff=0.8542;MQ=55.80;MQ0=42;MQRankSum=-0.313;QD=31.26;ReadPosRankSum=1.115;VQSLOD=5.4178;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:94.97:0,95,981	1/1:8,1:9:24.04:309,24,0	0/0:76,0:20:44.50:0,44,585	0/0:79,0:27:62.90:0,63,724	0/0:23,0:22:50.64:0,51,553	0/0:21,0:21:55.39:0,55,674	0/0:17,0:17:41.91:0,42,502	0/0:25,0:25:63.16:0,63,787	0/0:38,0:38:91.16:0,91,1163	1/1:28,0:28:40.80:929,41,0	0/1:18,0:18:9.01:374,0,9	0/0:32,0:32:81.11:0,81,874	0/0:47,0:47:99:0,117,1298	0/0:36,0:36:92.85:0,93,1075	0/0:38,0:38:90.27:0,90,1120	0/0:39,0:38:90.23:0,90,1104	1/1:23,4:26:67.99:911,68,0	1/1:3,0:1:3:26,3,0	0/0:20,0:20:45.12:0,45,566	0/0:23,0:23:24.79:0,25,635	0/0:97,0:97:99:0,189,2321	0/0:22,0:22:47.82:0,48,488	0/0:23,0:23:46.82:0,47,613	0/0:56,0:56:99:0,129,1403	1/1:31,1:31:75.68:1109,76,0	0/0:41,0:40:50.13:0,50,1082	0/0:32,0:32:78.21:0,78,952	0/0:11,0:11:13.41:0,13,266
chr10	71642742	.	TG	T	1225.93	PASS	AB=0.737;AC=10;AF=0.179;AN=56;BaseQRankSum=11.960;DP=1015;FS=7.228;HRun=2;HaplotypeScore=151.3110;InbreedingCoeff=0.7076;MQ=54.64;MQ0=62;MQRankSum=-3.430;QD=9.65;ReadPosRankSum=0.199;VQSLOD=1.1256;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,1:51:71.34:0,71,851	1/1:6,4:10:23.75:165,24,0	0/0:74,0:18:29.53:0,30,610	0/0:75,0:23:66.07:0,66,820	0/0:22,0:20:50.56:0,51,612	0/0:24,0:22:59.67:0,60,777	0/0:20,0:20:20.58:0,21,558	0/0:36,0:31:87.75:0,88,1133	0/0:41,1:41:75.02:0,75,1303	0/1:23,8:30:45.89:434,0,46	0/1:9,8:17:16.17:64,0,16	0/0:33,0:32:75.92:0,76,703	0/0:50,0:49:99:0,110,1003	0/0:37,0:37:97.77:0,98,1268	0/0:43,0:41:97.72:0,98,1244	0/0:40,0:39:94.73:0,95,1212	1/1:23,7:27:35.27:293,35,0	1/1:3,1:2:2.89:31,3,0	0/0:20,1:20:21.16:0,21,670	0/0:26,0:25:70.51:0,71,821	0/0:100,0:98:99:0,221,2891	0/0:24,1:25:36.84:0,37,271	0/0:23,0:23:52.82:0,53,617	0/0:57,0:57:99:0,117,970	1/1:23,11:34:65.61:400,66,0	0/0:43,0:42:99:0,108,1425	0/0:31,0:31:83.10:0,83,1077	0/0:12,0:14:20.73:0,21,326
chr10	71642743	.	GGT	G	2854.05	PASS	AB=0.932;AC=33;AF=0.635;AN=52;BaseQRankSum=8.268;DP=1014;FS=7.741;HRun=0;HaplotypeScore=158.0157;InbreedingCoeff=-0.2434;MQ=54.58;MQ0=63;MQRankSum=0.607;QD=3.89;ReadPosRankSum=2.022;VQSLOD=2.4390;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,22:51:25.40:306,25,0	0/1:10,0:10:3:21,0,3	./.	./.	0/1:18,4:20:18.12:18,0,164	0/1:23,0:21:12.09:12,0,244	0/1:16,2:20:6.10:6,0,264	0/0:35,0:30:0.65:0,1,100	0/1:38,1:41:63.03:63,0,613	0/1:32,0:31:7.92:81,0,8	0/1:17,0:17:7.46:7,0,8	1/1:20,11:32:29.75:293,30,0	1/1:25,23:49:56.66:590,57,0	0/1:30,6:36:36.29:36,0,708	0/1:33,10:41:53.67:54,0,467	0/1:32,8:39:57.36:57,0,424	1/1:28,0:26:13.31:79,13,0	1/1:8,0:5:7.90:38,8,0	0/1:21,0:20:21.07:21,0,113	0/1:25,1:26:69.57:70,0,251	0/0:86,10:95:22.96:0,23,1041	1/1:9,15:25:33.39:347,33,0	1/1:17,5:23:4.13:44,4,0	1/1:27,27:57:41.13:703,41,0	1/1:34,0:33:14.22:54,14,0	0/1:42,1:42:57.60:58,0,526	0/1:27,4:31:32.88:33,0,351	0/1:14,0:14:18.68:21,0,19
chr10	71642746	.	GTGT	G	1392.61	PASS	AB=0.831;AC=9;AF=0.161;AN=56;BaseQRankSum=11.915;DP=1024;FS=0.818;HRun=0;HaplotypeScore=182.1296;InbreedingCoeff=0.6083;MQ=53.56;MQ0=73;MQRankSum=2.070;QD=10.09;ReadPosRankSum=0.294;VQSLOD=3.1199;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:76.61:0,77,818	1/1:7,3:10:18.66:163,19,0	0/0:73,0:13:23.93:0,24,397	0/0:76,0:19:54.13:0,54,658	0/0:21,0:18:38.99:0,39,620	0/0:23,0:21:63.07:0,63,989	0/0:22,0:22:60.06:0,60,968	0/0:37,0:32:88.86:0,89,1304	0/0:41,0:40:95.80:0,96,1771	0/1:26,7:32:94.71:510,0,95	0/1:14,4:19:11.32:81,0,11	0/0:30,0:29:47.06:0,47,557	0/0:50,0:49:99:0,100,1019	0/0:36,0:36:98.91:0,99,1817	0/0:44,0:42:99:0,102,1706	0/0:40,0:39:93.37:0,93,1508	1/1:24,4:27:16.88:366,17,0	0/1:8,1:6:34.52:35,0,41	0/0:22,0:20:55.20:0,55,742	0/0:29,0:28:50.17:0,50,1066	0/0:97,0:95:99:0,210,3588	0/0:25,0:25:37.11:0,37,338	0/0:24,0:24:47.04:0,47,619	0/0:58,0:58:97.31:0,97,1042	1/1:27,8:35:51.39:395,51,0	0/0:40,1:40:95.93:0,96,1799	0/0:32,0:32:87.02:0,87,1394	0/0:15,0:15:35.67:0,36,395
chr10	71643148	.	GA	G	425.23	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.185;DP=760;FS=2.173;HRun=2;HaplotypeScore=69.8309;InbreedingCoeff=0.6739;MQ=60.65;MQ0=2;MQRankSum=-0.197;QD=25.01;ReadPosRankSum=0.941;VQSLOD=3.4279;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,125,1980	0/0:16,0:16:45.15:0,45,674	0/0:24,0:17:48.12:0,48,668	0/0:30,0:27:80.59:0,81,1081	0/0:27,0:27:81.27:0,81,1205	0/0:24,0:24:72.24:0,72,1079	0/0:27,0:27:81.25:0,81,1175	0/0:25,0:25:72.23:0,72,1044	0/0:18,0:18:48.16:0,48,719	0/0:25,0:25:69.22:0,69,999	0/0:24,0:24:69.23:0,69,1015	0/0:33,0:33:95.68:0,96,1383	0/0:24,0:24:69.21:0,69,996	0/0:25,0:25:75.25:0,75,1122	0/0:38,0:38:99:0,108,1598	0/0:41,0:41:99:0,123,1801	0/0:31,0:31:84.26:0,84,1230	1/1:1,16:17:0.39:500,0,0	0/0:35,0:34:99:0,102,1460	0/0:22,0:22:63.17:0,63,916	0/0:27,0:27:81.26:0,81,1194	0/0:30,0:30:90.24:0,90,1297	0/0:23,0:23:69.19:0,69,1008	0/0:39,0:39:99:0,117,1687	0/0:26,0:26:78.25:0,78,1148	0/0:30,0:30:90.29:0,90,1327	0/0:25,0:25:75.24:0,75,1088	0/0:7,0:7:21.07:0,21,315
chr10	71643786	.	GGGAAAGATCCTT	G	738.96	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.428;DP=709;FS=16.647;HRun=0;HaplotypeScore=239.0979;InbreedingCoeff=0.9932;MQ=69.82;MQ0=0;MQRankSum=-4.523;QD=82.11;ReadPosRankSum=1.579;VQSLOD=2.0860;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:72.72:0,73,4545	0/0:12,0:12:36.12:0,36,2006	0/0:13,0:13:36.01:0,36,1268	0/0:7,0:8:24.08:0,24,978	0/0:41,0:41:99:0,123,7350	0/0:23,0:23:69.24:0,69,4281	0/0:33,0:33:96.33:0,96,5582	0/0:46,0:46:99:0,135,7987	0/0:21,0:21:63.22:0,63,3581	0/0:32,0:32:96.30:0,96,5467	0/0:22,0:22:66.23:0,66,3968	0/0:24,0:24:72.24:0,72,4029	0/0:34,0:34:99:0,102,6087	0/0:20,0:20:60.21:0,60,3697	0/0:26,0:26:78.25:0,78,4448	0/0:29,0:29:87.30:0,87,5387	0/0:28,0:28:81.24:0,81,4700	1/1:0,9:9:21.07:831,21,0	0/0:30,0:30:90.28:0,90,5170	0/0:36,0:36:99:0,108,6638	0/0:21,0:21:63.20:0,63,3185	0/0:26,0:26:78.27:0,78,4482	0/0:17,0:17:51.15:0,51,2873	0/0:23,0:23:69.19:0,69,3772	0/0:28,0:28:75.26:0,75,4322	0/0:31,0:31:93.29:0,93,5005	0/0:36,0:36:99:0,108,6544	0/0:11,0:11:30.10:0,30,1909
chr10	71643806	.	C	CT	4326.03	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=-11.050;DP=646;FS=4.990;HRun=8;HaplotypeScore=66.6576;InbreedingCoeff=0.8379;MQ=67.04;MQ0=1;MQRankSum=-0.563;QD=23.64;ReadPosRankSum=-0.706;VQSLOD=5.2919;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,39:45:99:1197,105,0	1/1:1,10:11:27.07:302,27,0	0/1:13,0:9:8.07:8,0,41	0/1:8,0:6:6.46:6,0,18	0/0:30,0:30:75.01:0,75,681	0/0:20,0:20:54.03:0,54,494	0/0:27,0:27:72.04:0,72,659	0/0:38,0:38:96.03:0,96,873	0/0:15,0:15:42.02:0,42,384	1/1:6,24:30:75.22:860,75,0	1/1:0,21:21:51.15:578,51,0	0/0:20,0:20:48:0,48,433	0/0:31,0:31:90.03:0,90,817	0/0:17,0:17:48.03:0,48,439	0/0:25,0:25:63.03:0,63,577	0/0:27,0:27:69.03:0,69,631	1/1:6,19:26:59.68:648,60,0	0/0:10,0:10:23.97:0,24,211	0/0:26,0:26:65.98:0,66,592	0/0:34,0:34:93.03:0,93,846	0/0:16,0:16:45.02:0,45,412	0/0:22,0:22:66.02:0,66,600	0/0:16,0:16:39.01:0,39,357	0/0:23,0:23:56.81:0,57,555	1/1:3,26:29:63.19:727,63,0	0/0:22,1:23:31.41:0,31,539	0/0:31,0:31:84.04:0,84,768	0/0:12,0:12:33.02:0,33,302
chr10	71645136	.	T	TA	355.10	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.673;DP=507;FS=1.017;HRun=8;HaplotypeScore=51.5639;InbreedingCoeff=0.9536;MQ=68.11;MQ0=0;MQRankSum=-5.001;QD=22.19;ReadPosRankSum=-0.297;VQSLOD=3.7313;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,1:15:30:0,30,275	0/0:7,0:7:18.01:0,18,165	0/0:8,0:7:12:0,12,110	0/0:20,0:19:38.92:0,39,342	0/0:29,0:29:72.03:0,72,659	0/0:22,0:22:57.02:0,57,522	0/0:7,0:8:20.04:0,20,170	0/0:33,0:33:78.02:0,78,714	0/0:11,0:11:30.02:0,30,275	0/0:23,0:23:63.03:0,63,574	0/0:24,0:24:72.04:0,72,659	0/0:12,0:12:33.02:0,33,302	0/0:21,0:21:54.02:0,54,494	0/0:11,0:11:33.02:0,33,302	0/0:20,0:20:60.02:0,60,545	0/0:14,0:14:33.01:0,33,302	0/0:23,0:23:62.97:0,63,563	1/1:3,13:16:39.12:450,39,0	0/0:21,0:21:57.02:0,57,518	0/0:30,1:31:46.41:0,46,679	0/0:12,0:12:27.01:0,27,247	0/0:11,0:11:30.02:0,30,274	0/0:24,0:24:66.02:0,66,600	0/0:15,0:15:42.02:0,42,384	0/0:20,0:20:54.02:0,54,494	0/0:23,0:24:62.06:0,62,553	0/0:23,0:23:69.04:0,69,631	0/0:9,0:9:27.01:0,27,247
chr10	71645186	.	CAACCTGTACAT	C	705.49	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.547;DP=459;FS=11.513;HRun=0;HaplotypeScore=143.7968;InbreedingCoeff=0.9440;MQ=75.59;MQ0=0;MQRankSum=-4.657;QD=58.79;ReadPosRankSum=0.067;VQSLOD=2.6731;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39.10:0,39,2055	0/0:5,0:5:15.04:0,15,710	0/0:21,0:21:60.21:0,60,2929	0/0:17,0:16:45.15:0,45,2198	0/0:18,0:18:54.19:0,54,3012	0/0:19,0:19:57.18:0,57,3083	0/0:10,0:10:30.10:0,30,1585	0/0:30,0:30:87.29:0,87,4513	0/0:9,0:9:27.09:0,27,1573	0/0:16,0:16:48.16:0,48,2459	0/0:13,0:13:30.10:0,30,1635	0/0:12,0:12:36.12:0,36,2045	0/0:17,0:17:48.16:0,48,2423	0/0:14,0:14:42.14:0,42,2365	0/0:21,0:21:63.22:0,63,3494	0/0:12,0:12:36.12:0,36,1963	0/0:26,0:26:78.25:0,78,4249	1/1:4,8:12:24.08:799,24,0	0/0:24,0:24:69.23:0,69,3464	0/0:23,0:23:60.21:0,60,3269	0/0:12,0:12:36.12:0,36,1993	0/0:6,0:6:12.04:0,12,673	0/0:18,0:18:54.19:0,54,2796	0/0:25,0:25:72.25:0,72,4057	0/0:22,0:22:63.22:0,63,3536	0/0:14,0:14:39.13:0,39,2180	0/0:23,0:23:66.14:0,66,3660	0/0:6,0:6:18.06:0,18,815
chr10	71646324	.	CA	C	1888.68	PASS	AB=0.857;AC=11;AF=0.196;AN=56;BaseQRankSum=2.662;DP=587;FS=1.419;HRun=10;HaplotypeScore=78.6634;InbreedingCoeff=0.8816;MQ=59.99;MQ0=12;MQRankSum=0.928;QD=16.71;ReadPosRankSum=2.577;VQSLOD=4.2345;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:40:91.33:0,91,485	0/0:5,0:11:26.02:0,26,147	0/1:5,1:5:11.04:11,0,104	0/0:6,0:5:15.03:0,15,157	0/0:32,0:32:52.09:0,52,682	0/0:17,1:18:28.06:0,28,521	0/0:16,0:16:45.08:0,45,484	0/0:34,0:30:78.13:0,78,829	0/0:12,0:12:30.06:0,30,317	0/0:5,0:26:60.16:0,60,323	0/0:7,0:22:46.09:0,46,240	1/1:3,17:21:44.02:371,44,0	1/1:3,21:24:29.78:487,30,0	0/0:16,0:16:41.59:0,42,432	0/0:17,0:17:33.91:0,34,378	0/0:18,0:18:54:0,54,555	0/0:6,0:29:61.25:0,61,342	0/0:3,0:11:22.24:0,22,108	0/0:16,1:18:10.95:0,11,304	0/0:27,0:27:75.20:0,75,829	0/0:12,0:12:24.52:0,25,257	1/1:4,18:21:50.99:443,51,0	1/1:2,13:15:26.86:234,27,0	1/1:2,23:25:59.98:521,60,0	0/0:9,0:26:51.48:0,51,258	0/0:27,0:27:75.20:0,75,823	0/0:32,2:34:55.42:0,55,819	0/0:15,0:13:38.86:0,39,391
chr10	71647889	.	GATTT	G	1314.90	PASS	AC=16;AF=0.421;AN=38;BaseQRankSum=6.670;DP=246;FS=9.946;HRun=0;HaplotypeScore=44.3915;InbreedingCoeff=0.7828;MQ=64.40;MQ0=4;MQRankSum=-0.188;QD=12.77;ReadPosRankSum=-1.271;VQSLOD=1.2244;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,8:16:18.06:280,18,0	0/0:4,0:4:9.03:0,9,212	./.	./.	./.	0/0:12,0:12:24.08:0,24,561	./.	0/0:40,0:36:11.99:0,12,144	./.	1/1:4,4:8:12.04:187,12,0	1/1:3,4:7:12:160,12,0	1/1:2,0:5:9:80,9,0	./.	0/0:3,0:3:9.03:0,9,212	0/0:6,0:6:6.02:0,6,142	0/0:5,0:5:9.02:0,9,166	1/1:12,18:30:33.11:514,33,0	1/1:17,0:17:9.01:84,9,0	0/0:10,0:9:9.03:0,9,212	./.	0/0:2,0:2:6.02:0,6,130	./.	1/1:8,0:9:3:28,3,0	./.	1/1:7,4:11:9.03:140,9,0	0/0:8,0:8:9.03:0,9,212	0/0:9,0:9:6.02:0,6,142	0/0:15,0:14:24.08:0,24,563
chr10	71650010	.	TTTTC	T	1513.28	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=5.742;DP=561;FS=0.567;HRun=0;HaplotypeScore=94.0452;InbreedingCoeff=0.4186;MQ=57.98;MQ0=14;MQRankSum=0.578;QD=12.51;ReadPosRankSum=0.220;VQSLOD=3.0311;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,28:35:62.24:1073,62,0	0/0:6,0:6:1.83:0,2,22	0/0:19,0:8:14.97:0,15,166	0/0:27,0:10:6.10:0,6,93	0/0:27,0:27:74.36:0,74,1443	0/0:22,0:22:66.19:0,66,1494	0/0:18,0:17:33.26:0,33,797	0/0:40,0:40:95.30:0,95,1716	0/0:16,0:16:48.08:0,48,924	0/1:22,0:21:59.58:60,0,102	0/1:19,0:17:6.56:7,0,114	0/0:22,0:22:66.21:0,66,1478	0/0:13,0:12:36.09:0,36,751	0/0:11,0:11:21.03:0,21,420	0/0:26,0:26:75.16:0,75,1452	0/0:20,0:19:57.12:0,57,1146	0/0:23,0:23:0.10:0,0,202	1/1:3,18:20:27.06:476,27,0	0/0:18,0:17:42.55:0,43,750	0/0:25,0:25:70.72:0,71,1451	0/0:11,0:11:33.11:0,33,761	0/0:6,0:6:15.05:0,15,327	0/0:12,0:12:30.09:0,30,617	0/0:20,0:19:54.09:0,54,1042	0/1:24,0:23:36.77:37,0,209	0/0:16,0:16:38.99:0,39,653	0/0:30,0:29:90.10:0,90,1661	0/0:12,0:12:30.03:0,30,541
chr10	71650011	.	TTTC	T	1208.54	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=8.957;DP=567;FS=2.564;HRun=0;HaplotypeScore=87.0143;InbreedingCoeff=0.5921;MQ=57.93;MQ0=14;MQRankSum=-0.055;QD=7.90;ReadPosRankSum=-0.131;VQSLOD=2.9738;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:32,3:35:60.53:651,61,0	1/1:6,0:6:4.51:22,5,0	0/0:18,0:8:14.69:0,15,150	0/0:27,0:10:7.13:0,7,72	0/0:27,0:27:74.13:0,74,1242	0/0:22,0:22:66.21:0,66,1253	0/0:18,0:17:46.15:0,46,717	0/0:40,0:40:94.28:0,94,1455	0/0:16,0:16:48.11:0,48,815	1/1:23,0:22:6.34:146,6,0	0/1:20,0:18:9.15:59,0,9	0/0:22,0:22:66.20:0,66,1212	0/0:13,0:12:36.09:0,36,623	0/0:11,0:11:21.05:0,21,361	0/0:26,0:26:75.18:0,75,1237	0/0:20,0:19:57.16:0,57,996	0/1:23,0:23:30:41,0,30	1/1:20,1:20:27.08:330,27,0	0/0:18,0:17:41.65:0,42,680	0/0:29,0:29:80.67:0,81,1319	0/0:11,0:11:33.10:0,33,624	0/0:6,0:6:15.04:0,15,276	0/0:12,0:12:30.02:0,30,515	0/0:20,0:19:54.11:0,54,898	0/1:25,0:24:41.32:121,0,41	0/0:16,0:16:39.04:0,39,587	0/0:30,0:29:90.11:0,90,1413	0/0:12,0:12:30.05:0,30,475
chr10	71650012	.	TTC	T	1871.29	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.716;DP=561;FS=3.681;HRun=0;HaplotypeScore=74.5406;InbreedingCoeff=0.9701;MQ=57.86;MQ0=14;MQRankSum=-1.229;QD=12.48;ReadPosRankSum=0.158;VQSLOD=3.1508;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:60.65:539,61,0	1/1:6,0:6:11.23:88,11,0	0/0:18,0:8:8.08:0,8,125	0/0:27,0:10:11.52:0,12,86	0/0:28,0:28:74.10:0,74,1026	0/0:22,0:22:66.21:0,66,1011	0/0:18,0:17:46.33:0,46,594	0/0:40,0:40:92.76:0,93,1207	0/0:16,0:16:48.12:0,48,679	1/1:20,3:22:52.57:392,53,0	1/1:19,0:17:26.94:192,27,0	0/0:22,0:22:66.18:0,66,965	0/0:13,0:12:36.07:0,36,498	0/0:10,0:10:21.05:0,21,286	0/0:26,0:26:75.12:0,75,1009	0/0:20,0:19:57.16:0,57,826	1/1:22,0:22:33.37:268,33,0	1/1:21,0:20:27.04:262,27,0	0/0:17,0:16:39.61:0,40,573	0/0:29,0:29:80.65:0,81,1068	0/0:11,0:11:32.90:0,33,491	0/0:5,0:5:15.01:0,15,210	0/0:12,0:12:30.02:0,30,424	0/0:19,0:18:54.12:0,54,743	1/1:23,1:23:34.72:327,35,0	0/0:16,0:16:39.03:0,39,507	0/0:30,0:29:90.11:0,90,1173	0/0:12,0:12:30.04:0,30,405
chr10	71650013	.	TC	T	2906.15	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.024;DP=557;FS=2.377;HRun=1;HaplotypeScore=61.1651;InbreedingCoeff=0.9413;MQ=57.81;MQ0=14;MQRankSum=-0.739;QD=19.91;ReadPosRankSum=0.009;VQSLOD=3.7478;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:33:53.15:418,53,0	1/1:0,6:6:11.81:149,12,0	0/0:18,0:8:8.02:0,8,118	0/0:27,0:10:1.97:0,2,52	0/0:28,0:28:65.88:0,66,823	0/0:22,0:22:66.19:0,66,794	0/0:18,0:17:46.32:0,46,461	0/0:39,0:39:90.40:0,90,955	0/0:17,0:17:47.99:0,48,539	1/1:4,18:21:57.05:614,57,0	1/1:3,16:17:37.76:397,38,0	0/0:22,0:22:66.13:0,66,751	0/0:13,0:12:36.06:0,36,396	0/0:10,0:10:20.86:0,21,217	0/0:26,0:26:74.69:0,75,804	0/0:20,0:19:57.15:0,57,669	1/1:10,12:22:50.47:671,50,0	1/1:20,0:19:26.90:209,27,0	0/0:17,0:16:37.15:0,37,436	0/0:29,0:29:77.06:0,77,822	0/0:11,0:11:30.09:0,30,368	0/0:5,0:5:15:0,15,166	0/0:12,0:12:30.01:0,30,336	0/0:20,0:19:54.10:0,54,601	1/1:18,6:23:56.68:643,57,0	0/0:15,0:15:38.98:0,39,426	0/0:31,0:30:89.52:0,90,917	0/0:11,0:11:30.06:0,30,340
chr10	71652021	.	AC	A	1843.54	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.027;DP=701;FS=5.310;HRun=1;HaplotypeScore=63.7173;InbreedingCoeff=0.9999;MQ=82.83;MQ0=0;MQRankSum=-4.839;QD=33.52;ReadPosRankSum=2.476;VQSLOD=3.4407;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:99:1465,105,0	0/0:15,0:15:45.15:0,45,718	0/0:16,0:16:45.04:0,45,606	0/0:23,0:23:56.21:0,56,724	0/0:42,0:42:99:0,126,1951	0/0:30,0:30:90.26:0,90,1360	0/0:19,0:19:57.15:0,57,834	0/0:29,0:29:87.23:0,87,1253	0/0:26,0:26:78.27:0,78,1237	0/0:24,0:24:72.23:0,72,1107	0/0:24,0:24:72.22:0,72,1100	0/0:17,0:17:51.17:0,51,813	0/0:24,0:24:72.23:0,72,1122	0/0:23,0:23:69.22:0,69,1057	0/0:29,0:29:87.24:0,87,1295	0/0:31,0:31:93.32:0,93,1480	0/0:31,0:31:93.19:0,93,1335	1/1:0,19:19:36.12:500,36,0	0/0:22,0:22:63.64:0,64,918	0/0:26,0:26:78.22:0,78,1170	0/0:23,0:23:69.15:0,69,1002	0/0:28,0:28:84.27:0,84,1307	0/0:22,0:22:66.20:0,66,1025	0/0:24,0:24:69.22:0,69,1076	0/0:22,0:22:63.21:0,63,1002	0/0:27,0:27:81.25:0,81,1227	0/0:32,0:32:96.29:0,96,1474	0/0:17,0:17:51.17:0,51,811
chr10	71652702	.	GGA	G	2450.69	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.655;DP=725;FS=1.744;HRun=0;HaplotypeScore=96.6353;InbreedingCoeff=0.9956;MQ=84.28;MQ0=0;MQRankSum=-6.338;QD=40.84;ReadPosRankSum=1.237;VQSLOD=5.6061;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,45:45:99:2034,126,0	0/0:13,0:13:39.13:0,39,791	0/0:30,0:30:85.82:0,86,1588	0/0:14,0:14:39.13:0,39,751	0/0:29,0:29:84.29:0,84,1706	0/0:25,0:25:75.23:0,75,1431	0/0:23,0:23:69.17:0,69,1320	0/0:23,0:23:69.24:0,69,1386	0/0:25,0:25:72.25:0,72,1461	0/0:50,0:50:99:0,150,2927	0/0:29,0:29:87.29:0,87,1730	0/0:12,0:12:36.11:0,36,672	0/0:31,0:31:93.32:0,93,1873	0/0:21,0:21:63.22:0,63,1280	0/0:29,0:29:87.30:0,87,1749	0/0:33,0:33:99:0,99,1976	0/0:29,0:29:87.30:0,87,1765	1/1:0,15:15:33.11:538,33,0	0/0:23,0:23:69.23:0,69,1334	0/0:38,0:38:99:0,114,2259	0/0:32,0:32:96.33:0,96,1932	0/0:26,0:26:75.26:0,75,1503	0/0:26,0:26:78.27:0,78,1583	0/0:15,0:15:42.14:0,42,853	0/0:27,0:27:81.28:0,81,1633	0/0:23,0:23:69.24:0,69,1401	0/0:33,0:33:99:0,99,1876	0/0:6,0:6:18.06:0,18,359
chr10	71653871	.	A	AG	11676.68	PASS	AB=0.933;AC=25;AF=0.446;AN=56;BaseQRankSum=7.375;DP=739;FS=4.564;HRun=3;HaplotypeScore=88.7519;InbreedingCoeff=0.9538;MQ=82.10;MQ0=1;MQRankSum=-1.303;QD=33.85;ReadPosRankSum=4.331;VQSLOD=5.2978;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,48:53:99:1806,129,0	1/1:0,10:10:30.10:413,30,0	0/0:19,0:19:33.80:0,34,518	0/0:23,0:23:57.04:0,57,624	0/0:27,0:27:72.22:0,72,863	0/0:14,0:14:39.12:0,39,468	0/0:27,0:27:70.06:0,70,835	0/0:41,0:41:99:0,120,1432	0/0:21,0:21:60.18:0,60,720	1/1:3,25:28:75.25:1050,75,0	1/1:1,18:19:54.18:755,54,0	1/1:2,28:30:84.28:1172,84,0	1/1:1,15:16:39.13:546,39,0	0/0:28,0:28:78.22:0,78,924	0/0:35,0:35:99:0,99,1176	0/0:30,0:30:84.20:0,84,980	1/1:1,39:40:99:1512,108,0	1/1:2,26:28:60.20:840,60,0	0/0:25,0:25:69.19:0,69,809	0/0:26,0:26:72.19:0,72,840	0/0:46,0:45:99:0,129,1548	1/1:1,22:23:66.21:908,66,0	1/1:0,12:12:36.12:504,36,0	1/1:0,38:38:99:1428,102,0	1/1:1,19:20:54.17:741,54,0	0/1:26,2:28:2.26:2,0,819	0/0:25,0:25:75.21:0,75,885	0/0:7,0:7:21.06:0,21,252
chr10	71654354	.	CTGGACATGGACATGGACATGGACA	C	1030.57	PASS	AB=1.000;AC=11;AF=0.212;AN=52;BaseQRankSum=5.589;DP=703;FS=0.000;HRun=0;HaplotypeScore=407.3535;InbreedingCoeff=0.7653;MQ=71.12;MQ0=4;MQRankSum=-0.490;QD=7.06;ReadPosRankSum=0.513;VQSLOD=0.5940;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:6.01:98,6,0	./.	0/1:28,0:27:0:0,0,0	./.	0/0:34,0:34:63.19:0,63,5318	0/0:12,0:12:24.08:0,24,1975	0/0:26,0:26:48.14:0,48,2499	0/0:34,0:34:3.47:0,3,28	0/0:24,0:24:48.15:0,48,3120	1/1:20,5:25:12:310,12,0	1/1:10,5:14:5.98:206,6,0	0/0:28,0:28:57.17:0,57,4307	0/0:28,0:28:42.14:0,42,3776	0/0:35,0:35:60.19:0,60,5170	0/0:28,0:28:57.18:0,57,5292	0/0:31,0:31:54.19:0,54,4779	1/1:23,7:30:3.01:186,3,0	0/0:12,0:12:2.22:0,2,7	0/0:22,0:18:18.06:0,18,1122	0/0:29,0:29:45.15:0,45,3279	0/0:51,0:51:95.14:0,95,8209	0/0:20,0:20:30.56:0,31,2195	0/0:24,0:24:33.11:0,33,2317	0/0:19,0:18:27.09:0,27,2024	1/1:8,3:11:6.02:372,6,0	0/0:21,0:21:27.08:0,27,1672	0/0:42,0:42:60.17:0,60,4445	0/0:9,0:9:15.05:0,15,1512
chr10	71654783	.	C	CAAAA	4275.55	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=1.379;DP=512;FS=4.889;HRun=10;HaplotypeScore=92.2009;InbreedingCoeff=0.9066;MQ=68.01;MQ0=2;MQRankSum=-2.063;QD=22.15;ReadPosRankSum=-1.606;VQSLOD=2.7692;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:32:17.77:0,18,92	1/1:1,4:7:15.05:307,15,0	0/0:26,0:11:7.20:0,7,108	0/1:30,0:13:2:2,0,63	0/0:23,0:23:37.77:0,38,575	0/0:13,0:13:33.02:0,33,447	0/0:11,0:12:28.60:0,29,365	0/0:34,0:34:74.68:0,75,947	0/0:9,0:9:24.03:0,24,297	1/1:6,13:26:63.04:1014,63,0	1/1:3,10:20:47.94:707,48,0	1/1:2,0:14:21.07:273,21,0	1/1:2,1:11:10.39:148,10,0	0/0:9,0:9:24.07:0,24,330	0/0:16,0:17:46.37:0,46,617	0/0:14,0:14:39.12:0,39,551	1/1:7,15:26:29.69:511,30,0	0/0:29,0:30:60.20:0,60,931	0/0:13,0:14:33.02:0,33,440	0/0:16,0:16:45.13:0,45,636	0/0:2,0:2:6.02:0,6,85	1/1:2,0:12:18.01:205,18,0	1/1:5,0:16:16.29:237,16,0	1/1:1,0:11:12.04:149,12,0	1/1:2,15:18:33.11:724,33,0	0/0:29,0:29:72.78:0,73,952	0/0:20,0:20:60.20:0,60,847	0/0:16,0:17:48.08:0,48,620
chr10	71657156	.	A	AT	1926.99	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-9.700;DP=598;FS=10.604;HRun=9;HaplotypeScore=60.5129;InbreedingCoeff=0.9399;MQ=70.01;MQ0=0;MQRankSum=0.883;QD=22.67;ReadPosRankSum=1.200;VQSLOD=4.1321;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:32:55:0,55,162	0/0:9,0:9:23.97:0,24,205	0/0:10,0:10:6.64:0,7,119	0/0:7,0:7:5.99:0,6,52	0/0:39,0:39:95.94:0,96,829	0/0:25,1:26:35.75:0,36,526	0/0:15,0:15:29.99:0,30,260	0/0:35,0:34:89.96:0,90,777	0/0:11,0:11:29.99:0,30,260	0/0:32,0:31:92.98:0,93,806	0/0:26,0:26:62.96:0,63,544	1/1:1,19:20:54.15:597,54,0	1/1:6,10:16:24.06:266,24,0	0/0:22,0:22:65.96:0,66,568	0/0:28,0:27:74.98:0,75,651	0/0:19,0:19:50.98:0,51,443	0/0:19,0:19:41.98:0,42,365	0/0:4,0:18:28.52:0,29,84	0/0:19,0:19:41.98:0,42,364	0/0:36,0:36:99:0,102,885	0/0:13,0:13:35.96:0,36,307	1/1:6,19:25:54.62:598,55,0	1/1:4,17:21:28.04:537,28,0	1/1:0,3:3:9.02:100,9,0	0/0:27,0:27:74.98:0,75,651	0/0:29,0:29:77.97:0,78,676	0/0:23,0:23:62.99:0,63,547	0/0:18,0:18:53.99:0,54,469
chr10	71657499	.	G	GTA	2888.26	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-10.235;DP=697;FS=0.514;HRun=0;HaplotypeScore=78.0144;InbreedingCoeff=0.9987;MQ=67.74;MQ0=0;MQRankSum=1.422;QD=45.85;ReadPosRankSum=1.253;VQSLOD=5.0580;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,48:50:99:2393,129,0	0/0:8,0:8:24.08:0,24,353	0/0:28,0:23:52.83:0,53,842	0/0:30,0:28:65.24:0,65,913	0/0:22,0:22:63.17:0,63,886	0/0:21,0:21:63.21:0,63,924	0/0:28,0:28:78.25:0,78,1122	0/0:29,0:29:75.22:0,75,1032	0/0:28,0:28:84.28:0,84,1222	0/0:20,0:20:54.16:0,54,773	0/0:14,0:14:39.13:0,39,572	0/0:31,0:31:87.29:0,87,1280	0/0:33,0:33:99:0,99,1457	0/0:21,0:21:60.19:0,60,862	0/0:32,0:32:93.31:0,93,1367	0/0:33,0:33:96.31:0,96,1391	0/0:25,0:25:69.23:0,69,1013	1/1:0,13:13:33.11:617,33,0	0/0:23,0:23:63.21:0,63,927	0/0:14,0:14:39.11:0,39,553	0/0:43,0:43:99:0,129,1898	0/0:20,0:20:60.20:0,60,881	0/0:14,0:14:39.13:0,39,574	0/0:36,0:36:99:0,105,1546	0/0:17,0:17:45.15:0,45,663	0/0:19,0:19:51.16:0,51,732	0/0:32,0:32:87.28:0,87,1257	0/0:13,0:13:39.13:0,39,573
chr10	71657907	.	TGG	T	420	PASS	AB=0.923;AC=5;AF=0.100;AN=50;BaseQRankSum=3.673;DP=188;FS=14.191;HRun=10;HaplotypeScore=35.2245;InbreedingCoeff=0.3636;MQ=84.57;MQ0=0;MQRankSum=-2.771;QD=11.05;ReadPosRankSum=3.046;VQSLOD=0.0556;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,15:22:44.98:458,45,0	0/0:3,0:3:0:0,0,0	0/0:9,0:8:15.34:0,15,113	0/1:9,0:11:12.70:13,0,100	0/0:3,0:3:3.01:0,3,43	0/0:8,0:8:6.02:0,6,83	0/0:2,0:3:5.51:0,6,56	0/0:8,0:9:8.52:0,9,102	0/0:10,0:10:26.58:0,27,380	0/0:11,0:11:8.65:0,9,50	0/0:3,0:4:2.37:0,2,8	0/0:2,0:3:3:0,3,27	./.	0/0:7,0:7:17.50:0,18,196	0/0:7,0:7:11.77:0,12,134	0/0:10,0:10:27.09:0,27,407	0/0:11,0:11:14.63:0,15,101	1/1:0,4:4:6.01:62,6,0	0/0:6,0:6:6.01:0,6,75	./.	0/0:5,0:5:11.51:0,12,118	0/0:1,0:1:3.01:0,3,46	./.	0/0:2,0:2:2.94:0,3,18	0/0:7,0:7:4.88:0,5,21	0/0:12,0:12:30.08:0,30,439	0/0:12,0:12:24.06:0,24,322	0/0:1,0:1:3.01:0,3,48
chr10	71657916	.	G	GC	201.05	PASS	AB=0.750;AC=7;AF=0.135;AN=52;BaseQRankSum=3.050;DP=168;FS=9.391;HRun=0;HaplotypeScore=33.5904;InbreedingCoeff=0.2263;MQ=86.06;MQ0=0;MQRankSum=0.606;QD=6.09;ReadPosRankSum=1.810;VQSLOD=1.8694;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:43.55:0,44,193	0/0:1,0:1:0:0,0,0	0/0:11,0:8:17.44:0,17,125	0/1:12,0:11:13.42:13,0,122	0/0:4,0:4:5.90:0,6,42	0/0:5,0:5:7.23:0,7,86	0/0:3,0:3:8.89:0,9,83	0/0:11,0:11:18.34:0,18,181	0/0:11,0:11:32.86:0,33,371	0/1:2,3:5:8.11:107,0,8	1/1:1,0:1:0.47:1,0,0	0/0:3,0:3:2.99:0,3,24	0/0:1,0:1:0:0,0,0	0/0:7,0:7:15.13:0,15,149	0/0:5,0:5:10.26:0,10,111	0/0:9,0:9:26.98:0,27,313	0/1:4,6:10:28.76:141,0,29	0/0:4,0:4:5.48:0,5,24	0/0:5,0:5:6.02:0,6,79	./.	0/0:7,0:6:14.83:0,15,126	0/0:1,0:1:3.01:0,3,33	./.	0/0:2,0:2:1.82:0,2,5	1/1:3,2:5:4.49:45,4,0	0/0:11,0:11:29.83:0,30,356	0/0:11,0:11:20.57:0,21,211	0/0:1,0:1:3.01:0,3,42
chr10	71657918	.	CG	C	329.90	PASS	AC=4;AF=0.091;AN=44;BaseQRankSum=3.436;DP=169;FS=11.231;HRun=10;HaplotypeScore=33.8339;InbreedingCoeff=0.5512;MQ=87.82;MQ0=0;MQRankSum=-1.462;QD=13.75;ReadPosRankSum=1.969;VQSLOD=1.8825;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:42.02:381,42,0	./.	0/0:11,0:8:13.03:0,13,138	0/0:13,0:12:18.19:0,18,146	0/0:5,0:5:6.79:0,7,88	0/0:5,0:5:11.71:0,12,117	0/0:4,0:4:11.93:0,12,109	0/0:11,0:11:18.43:0,18,188	0/0:11,0:11:27.02:0,27,288	0/0:6,0:6:5.84:0,6,31	./.	./.	0/0:1,0:1:0:0,0,0	0/0:7,0:7:18.70:0,19,167	0/0:3,0:3:6.02:0,6,72	0/0:9,0:9:23.98:0,24,245	0/0:9,0:9:13.58:0,14,62	1/1:2,2:4:6:54,6,0	0/0:5,0:5:3.01:0,3,36	./.	0/0:9,0:8:20.99:0,21,218	./.	./.	0/0:3,0:3:4.52:0,5,24	0/0:5,0:5:3.56:0,4,13	0/0:10,0:10:24.05:0,24,266	0/0:12,0:12:27.91:0,28,241	0/0:1,0:1:3.01:0,3,36
chr10	71658972	.	A	ATTT	12788.97	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-11.026;DP=533;FS=0.685;HRun=2;HaplotypeScore=74.3562;InbreedingCoeff=0.9991;MQ=90.92;MQ0=0;MQRankSum=-4.970;QD=57.61;ReadPosRankSum=2.618;VQSLOD=5.0236;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,11:14:33.07:623,33,0	1/1:0,9:9:27.09:622,27,0	0/0:29,0:29:81.25:0,81,1286	0/0:19,0:19:30.64:0,31,500	0/0:14,0:14:42.13:0,42,673	0/0:23,0:23:69.24:0,69,1135	0/0:18,0:18:54.17:0,54,871	0/0:24,0:24:66.22:0,66,1077	0/0:16,0:16:48.16:0,48,802	1/1:0,29:30:90.30:2006,90,0	1/1:0,17:17:45.07:938,45,0	1/1:1,17:19:45.15:1036,45,0	1/1:1,26:27:69.24:1581,69,0	0/0:24,0:24:72.21:0,72,1147	0/0:22,0:21:60.20:0,60,986	0/0:13,0:13:36.09:0,36,549	1/1:5,19:24:72.23:1545,72,0	1/1:4,5:9:20.94:229,21,0	0/0:21,0:21:57.19:0,57,920	0/0:19,0:19:51.17:0,51,852	0/0:14,0:14:39.10:0,39,599	1/1:0,11:12:33.07:710,33,0	1/1:0,19:20:53.97:1135,54,0	1/1:0,15:15:39.13:897,39,0	1/1:8,18:26:69.22:1468,69,0	0/0:18,0:18:54.18:0,54,889	0/0:24,0:24:72.23:0,72,1173	0/0:13,0:13:39.13:0,39,639
chr10	71659058	.	TA	T	2638.20	PASS	AB=0.934;AC=17;AF=0.304;AN=56;BaseQRankSum=11.977;DP=521;FS=1.261;HRun=11;HaplotypeScore=55.4026;InbreedingCoeff=0.7581;MQ=66.72;MQ0=0;MQRankSum=-1.522;QD=14.74;ReadPosRankSum=2.421;VQSLOD=4.1060;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,17:26:41.91:345,42,0	1/1:1,4:5:11.98:99,12,0	0/0:4,0:4:8.97:0,9,76	0/1:6,0:6:18.62:19,0,20	0/0:26,0:26:55.28:0,55,653	0/0:26,0:27:72:0,72,738	0/0:15,0:15:39.06:0,39,393	0/0:41,0:41:93.22:0,93,979	0/0:10,0:10:27.07:0,27,288	1/1:1,21:22:62.93:517,63,0	1/1:2,12:14:35.94:296,36,0	0/0:16,0:16:42.11:0,42,448	0/0:22,0:22:60.12:0,60,624	0/1:13,2:15:13.20:13,0,275	0/0:18,0:18:42.07:0,42,437	0/0:25,1:26:41.51:0,42,640	1/1:1,24:25:71.92:591,72,0	1/1:0,18:18:47.95:394,48,0	0/0:28,0:28:62.51:0,63,637	0/0:18,0:18:45.10:0,45,471	0/0:13,0:13:33.08:0,33,352	0/0:18,1:19:23.44:0,23,444	0/0:17,0:17:42.11:0,42,448	0/0:9,0:9:27.03:0,27,271	1/1:1,24:25:68.86:560,69,0	0/1:21,2:23:4.18:4,0,371	0/0:20,0:20:54.09:0,54,553	0/0:13,0:13:27.07:0,27,288
chr10	71659412	.	G	GC	1311.99	PASS	AB=0.831;AC=10;AF=0.179;AN=56;BaseQRankSum=6.260;DP=633;FS=3.404;HRun=0;HaplotypeScore=102.2973;InbreedingCoeff=-0.2175;MQ=82.16;MQ0=0;MQRankSum=-5.988;QD=5.58;ReadPosRankSum=-4.576;VQSLOD=2.7102;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:38,11:49:99:354,0,1075	0/1:6,1:7:26.73:27,0,231	0/0:24,0:24:68.41:0,68,936	0/0:18,0:18:32.42:0,32,535	0/0:11,0:11:30.07:0,30,384	0/0:14,0:14:42.13:0,42,570	0/0:37,0:37:99:0,108,1491	0/0:27,0:27:78.24:0,78,1061	0/0:17,0:17:51.17:0,51,712	0/1:17,3:20:86.47:86,0,610	0/0:8,1:9:24.06:0,24,316	0/1:25,8:33:99:194,0,943	0/1:18,4:22:99:125,0,687	0/0:24,0:24:63.21:0,63,877	0/0:18,0:18:54.18:0,54,755	0/0:18,0:18:54.18:0,54,754	0/1:20,10:29:99:212,0,702	0/1:24,6:30:99:203,0,838	0/0:25,0:25:72.24:0,72,1002	0/0:14,0:14:39.13:0,39,544	0/0:56,1:57:99:0,115,2121	0/1:12,2:14:53.76:54,0,461	0/1:9,2:11:62.61:63,0,344	0/0:37,1:38:35.77:0,36,1100	0/1:14,5:19:99:140,0,494	0/0:24,0:24:69.23:0,69,965	0/0:12,0:12:33.11:0,33,462	0/0:11,0:11:33.11:0,33,462
chr10	71659964	.	T	TA	3960.49	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=5.007;DP=344;FS=15.183;HRun=2;HaplotypeScore=39.6832;InbreedingCoeff=0.9624;MQ=87.68;MQ0=2;MQRankSum=-1.521;QD=28.91;ReadPosRankSum=3.226;VQSLOD=1.7955;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:51.17:721,51,0	1/1:0,6:6:17.89:206,18,0	0/0:21,0:17:41.34:0,41,352	0/0:15,0:10:18.08:0,18,124	0/0:6,0:6:18.06:0,18,222	0/0:15,0:15:45.14:0,45,555	0/0:11,0:11:33.09:0,33,396	0/0:29,0:29:75.21:0,75,898	0/0:6,0:6:18.04:0,18,199	1/1:0,4:4:12.03:154,12,0	1/1:0,10:10:26.88:312,27,0	1/1:6,2:8:18.90:183,19,0	1/1:1,2:3:6.02:79,6,0	0/0:7,0:7:15.05:0,15,185	0/0:6,0:6:18.05:0,18,213	0/0:10,0:10:30.07:0,30,340	1/1:3,30:33:60.20:861,60,0	1/1:0,14:14:18.06:258,18,0	0/0:13,0:13:35.66:0,36,367	0/0:12,0:12:36.11:0,36,445	0/0:9,0:9:21.03:0,21,234	1/1:0,6:6:14.88:141,15,0	1/1:3,4:7:18.49:191,18,0	1/1:3,2:5:12.01:120,12,0	1/1:1,21:22:51.17:732,51,0	0/0:9,0:9:27.07:0,27,313	0/0:17,0:17:51.12:0,51,585	0/0:21,0:21:63.17:0,63,754
chr10	71662211	.	T	TG	913.21	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.295;DP=648;FS=1.704;HRun=3;HaplotypeScore=78.8922;InbreedingCoeff=0.9989;MQ=86.05;MQ0=0;MQRankSum=-4.087;QD=31.49;ReadPosRankSum=2.461;VQSLOD=3.8359;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:72.24:1008,72,0	0/0:9,0:9:27.08:0,27,324	0/0:23,0:23:63.19:0,63,753	0/0:20,0:19:48.13:0,48,554	0/0:19,0:19:57.14:0,57,658	0/0:26,0:26:72.22:0,72,864	0/0:18,0:18:51.14:0,51,599	0/0:34,0:34:93.28:0,93,1115	0/0:25,0:25:75.21:0,75,887	0/0:21,0:21:60.18:0,60,720	0/0:18,0:18:48.15:0,48,576	0/0:26,0:26:75.16:0,75,860	0/0:25,0:25:69.21:0,69,827	0/0:28,0:28:78.24:0,78,935	0/0:35,0:35:99:0,99,1176	0/0:32,0:32:90.26:0,90,1069	0/0:20,0:20:54.12:0,54,622	0/0:16,0:16:48.15:0,48,576	0/0:27,0:27:69.18:0,69,805	0/0:15,0:15:45.14:0,45,539	0/0:24,0:24:72.20:0,72,851	0/0:24,0:24:66.15:0,66,763	0/0:19,0:19:45.11:0,45,528	0/0:23,0:23:63.17:0,63,743	0/0:35,0:35:90.26:0,90,1080	0/0:24,0:24:60.18:0,60,720	0/0:15,0:14:42.13:0,42,504	0/0:18,0:18:54.13:0,54,633
chr10	71662611	.	TTGTG	T	496.97	PASS	AB=0.846;AC=11;AF=0.196;AN=56;BaseQRankSum=3.143;DP=778;FS=3.247;HRun=0;HaplotypeScore=140.6369;InbreedingCoeff=0.4553;MQ=68.97;MQ0=18;MQRankSum=1.186;QD=2.51;ReadPosRankSum=1.214;VQSLOD=2.2092;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,1:39:34.97:35,0,46	0/0:7,0:10:6:0,6,77	0/0:33,0:22:0.47:0,0,1	0/0:35,0:23:1.55:0,2,4	0/0:24,0:24:16.21:0,16,185	0/0:26,0:25:29.73:0,30,497	0/0:22,0:21:33.08:0,33,607	0/0:31,0:31:14.84:0,15,124	0/0:18,0:19:20.78:0,21,319	0/0:29,0:29:15.38:0,15,236	0/0:16,0:23:20.07:0,20,251	1/1:12,10:22:9.50:135,10,0	0/1:24,15:38:55.66:172,0,56	0/0:12,0:12:4.29:0,4,86	0/0:35,0:35:57.24:0,57,1029	0/0:24,0:23:36.10:0,36,702	0/0:19,0:37:21.92:0,22,322	0/1:18,0:18:11.10:22,0,11	0/0:21,0:19:4.73:0,5,43	0/0:27,0:27:33.77:0,34,569	0/0:62,0:61:72.09:0,72,1153	1/1:17,9:25:8.96:140,9,0	1/1:13,6:19:3.01:47,3,0	1/1:15,17:33:5.69:93,6,0	0/0:15,0:25:6.02:0,6,86	0/0:34,0:32:36:0,36,663	0/0:28,0:27:17.19:0,17,390	0/0:21,0:21:12.15:0,12,642
chr10	71662645	.	GTGTGTGTGTGTA	G	45.91	PASS	AB=0.571;AC=1;AF=0.018;AN=56;BaseQRankSum=1.695;DP=743;FS=17.455;HRun=0;HaplotypeScore=230.0425;InbreedingCoeff=0.5071;MQ=53.14;MQ0=23;MQRankSum=-0.590;QD=2.30;ReadPosRankSum=-1.245;VQSLOD=0.8054;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:54:0,54,1004	0/0:14,0:13:18:0,18,384	0/0:29,0:15:38.91:0,39,362	0/0:29,0:11:26.81:0,27,258	0/0:21,0:21:42.03:0,42,972	0/0:21,0:20:51.10:0,51,1788	0/0:19,0:19:42.07:0,42,1479	0/0:25,0:23:59.97:0,60,802	0/0:24,0:23:40.08:0,40,1079	0/0:25,0:25:57.20:0,57,1480	0/0:20,0:20:38.08:0,38,1067	0/0:24,0:24:38.95:0,39,862	0/0:32,0:31:51.10:0,51,1147	0/0:15,0:15:38.43:0,38,998	0/0:31,0:31:81.19:0,81,3061	0/0:33,0:32:81.11:0,81,2489	0/0:38,0:38:46.54:0,47,1452	0/1:5,15:20:2.40:120,0,2	0/0:16,0:13:32.35:0,32,365	0/0:27,0:27:63.09:0,63,2076	0/0:57,0:57:99:0,120,3925	0/0:26,0:24:36.02:0,36,630	0/0:20,0:20:32.57:0,33,705	0/0:38,0:37:16.93:0,17,544	0/0:25,0:24:30:0,30,555	0/0:27,0:26:78.04:0,78,2624	0/0:26,0:23:57.03:0,57,1639	0/0:23,0:23:58.17:0,58,2267
chr10	71662974	.	A	AT	2888.84	PASS	AB=0.800;AC=12;AF=0.214;AN=56;BaseQRankSum=-7.522;DP=723;FS=10.496;HRun=13;HaplotypeScore=78.2378;InbreedingCoeff=0.8048;MQ=68.64;MQ0=0;MQRankSum=-1.737;QD=14.23;ReadPosRankSum=-0.214;VQSLOD=3.4345;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,50:58:93.66:1130,94,0	1/1:2,8:11:13.63:221,14,0	0/1:21,0:20:15.27:15,0,98	0/0:10,0:6:8.32:0,8,43	0/0:25,0:27:54.03:0,54,359	0/0:22,0:22:59.36:0,59,404	0/0:27,0:28:46.17:0,46,362	0/0:24,0:24:31.52:0,32,292	0/0:19,2:22:17.04:0,17,331	1/1:8,19:27:47.85:417,48,0	0/1:7,14:21:2.12:267,0,2	0/0:27,0:29:63.46:0,63,422	0/0:26,0:27:58.43:0,58,396	0/0:25,0:25:59.26:0,59,405	0/0:34,2:36:55.30:0,55,520	0/0:19,1:22:17.73:0,18,245	1/1:8,30:38:15.63:626,16,0	0/0:20,1:21:22.67:0,23,298	0/0:20,1:24:25.55:0,26,288	0/0:23,0:28:48.36:0,48,308	0/0:16,0:20:40.86:0,41,250	0/0:27,1:29:45.49:0,45,445	0/0:13,0:17:33.41:0,33,205	0/0:29,1:33:42.34:0,42,414	1/1:4,21:25:13.87:391,14,0	0/0:30,0:33:65:0,65,426	0/0:35,0:36:91.25:0,91,622	0/0:7,0:7:17.85:0,18,123
chr10	71663311	.	ATATGTAGTGCCTTCTTCTT	A	21713.67	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=17.288;DP=675;FS=0.733;HRun=0;HaplotypeScore=357.6548;InbreedingCoeff=0.9798;MQ=84.71;MQ0=0;MQRankSum=-16.636;QD=104.39;ReadPosRankSum=5.910;VQSLOD=3.7910;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,8243	1/1:2,15:17:36.12:1740,36,0	0/0:26,0:26:78.26:0,78,4615	0/0:25,0:25:63.22:0,63,3573	0/0:37,0:37:99:0,111,9859	0/0:19,0:19:51.16:0,51,3719	0/0:24,0:24:69.21:0,69,5013	0/0:36,0:36:99:0,105,7026	0/0:30,0:30:87.30:0,87,6890	1/1:4,15:19:39.12:1867,39,0	1/1:2,20:21:42.14:2305,42,0	1/1:3,27:30:72.25:3844,72,0	1/1:5,20:25:54.19:2964,54,0	0/0:28,0:28:84.29:0,84,7410	0/0:34,0:34:99:0,102,7739	0/0:30,0:30:90.31:0,90,7868	1/1:4,11:15:21.07:1043,21,0	1/1:3,2:5:6.02:329,6,0	0/0:16,0:16:48.16:0,48,3160	0/0:31,0:31:93.32:0,93,6993	0/0:29,0:29:84.24:0,84,5357	1/1:8,21:29:51.17:2799,51,0	1/1:2,18:20:44.72:2325,45,0	1/1:2,7:9:12.04:629,12,0	1/1:2,15:17:36.12:1867,36,0	0/0:33,0:33:96.33:0,96,8025	0/0:23,0:22:69.24:0,69,5737	0/0:9,0:9:27.09:0,27,2436
chr10	71664212	.	TAACACACAGATGAAGATGTGTTAA	T	7339.28	PASS	AC=22;AF=0.407;AN=54;BaseQRankSum=10.899;DP=648;FS=4.746;HRun=0;HaplotypeScore=370.0242;InbreedingCoeff=0.8338;MQ=64.66;MQ0=3;MQRankSum=-6.807;QD=32.19;ReadPosRankSum=-1.210;VQSLOD=2.4392;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:30.08:0,30,2509	1/1:4,1:5:3.01:168,3,0	./.	0/0:7,0:7:3.01:0,3,78	0/0:41,0:41:78.27:0,78,6968	0/0:27,0:27:54.19:0,54,4364	0/0:24,0:24:33.10:0,33,2375	0/0:30,0:30:24.06:0,24,803	0/0:26,0:26:51.15:0,51,4515	1/1:24,15:39:43.96:2214,44,0	1/1:9,6:15:15.05:766,15,0	1/1:13,12:25:6.02:374,6,0	1/1:16,12:28:15.05:897,15,0	0/0:20,0:20:36.12:0,36,3724	0/0:40,0:40:81.26:0,81,6666	0/0:30,0:30:63.20:0,63,5155	1/1:9,8:16:3.01:187,3,0	1/1:9,2:11:3.01:187,3,0	0/0:17,0:16:12.04:0,12,1112	0/0:33,0:33:51.18:0,51,4893	0/0:22,0:22:39.13:0,39,3962	1/1:15,10:24:21.07:672,21,0	1/1:18,11:29:21.07:1126,21,0	1/1:12,3:13:3.01:187,3,0	1/1:13,6:19:9.03:561,9,0	0/0:30,0:30:51.17:0,51,5002	0/0:33,0:31:57.20:0,57,4551	0/0:12,0:12:27.09:0,27,1844
chr10	71664608	.	CA	C	4954.10	PASS	AB=0.929;AC=23;AF=0.411;AN=56;BaseQRankSum=18.069;DP=628;FS=2.776;HRun=9;HaplotypeScore=87.9787;InbreedingCoeff=0.9223;MQ=72.58;MQ0=0;MQRankSum=-1.937;QD=20.99;ReadPosRankSum=3.368;VQSLOD=5.5596;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.13:0,57,634	1/1:1,10:11:27.01:247,27,0	0/1:12,1:12:26.82:27,0,210	0/0:9,0:10:18.51:0,19,174	0/0:28,0:28:81.19:0,81,896	0/0:31,0:31:90.15:0,90,989	0/0:20,0:20:51.15:0,51,588	0/0:41,0:41:99:0,114,1309	0/0:16,0:16:48.14:0,48,554	1/1:4,16:20:48.01:439,48,0	1/1:4,21:25:63.02:577,63,0	1/1:6,16:22:47.95:430,48,0	1/1:1,28:29:72.04:659,72,0	0/0:18,0:18:45.12:0,45,511	0/0:34,0:34:90.25:0,90,1022	0/0:29,0:29:81.22:0,81,925	1/1:2,16:18:45.02:412,45,0	1/1:0,11:11:27.01:247,27,0	0/0:26,0:26:66.18:0,66,747	0/0:28,0:28:81.18:0,81,888	0/0:15,1:16:14.64:0,15,412	1/1:2,20:22:57.03:522,57,0	1/1:3,26:29:71.63:658,72,0	1/1:2,10:12:24:215,24,0	1/1:5,19:24:57.03:522,57,0	0/0:24,1:25:41.74:0,42,734	0/0:32,1:33:65.80:0,66,1001	0/0:16,0:16:42.12:0,42,485
chr10	71664706	.	GTAGCTGTC	G	17327.73	PASS	AB=0.968;AC=23;AF=0.411;AN=56;BaseQRankSum=19.425;DP=713;FS=5.659;HRun=0;HaplotypeScore=193.3235;InbreedingCoeff=0.9610;MQ=80.47;MQ0=1;MQRankSum=-19.386;QD=65.64;ReadPosRankSum=1.696;VQSLOD=4.3922;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,4416	1/1:0,15:15:33.11:972,33,0	0/0:23,0:22:48.73:0,49,1960	0/0:22,0:22:57.17:0,57,2144	0/0:39,0:39:99:0,117,5322	0/0:31,0:31:93.28:0,93,3931	0/0:19,0:19:57.18:0,57,2345	0/0:25,0:25:75.25:0,75,3286	0/0:31,0:31:93.32:0,93,4146	1/1:0,28:28:84.19:2358,84,0	1/1:0,20:20:54.19:1626,54,0	1/1:0,25:25:57.20:1684,57,0	1/1:0,33:33:87.13:2623,87,0	0/0:23,0:23:69.22:0,69,2994	0/0:40,0:40:99:0,120,5263	0/0:31,0:31:93.28:0,93,3875	1/1:4,15:19:48.05:1303,48,0	1/1:2,8:10:30.03:766,30,0	0/0:18,0:18:54.12:0,54,2025	0/0:27,0:27:81.25:0,81,3425	0/0:37,0:36:99:0,108,4537	1/1:0,21:21:54.19:1627,54,0	1/1:5,18:23:57.18:1653,57,0	1/1:0,12:12:24.55:724,25,0	1/1:0,28:28:66.23:1991,66,0	0/1:29,1:30:0.34:0,0,3543	0/0:36,0:36:99:0,108,4304	0/0:12,0:12:36.12:0,36,1646
chr10	71665048	.	GTGT	G	864.89	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.207;DP=647;FS=6.776;HRun=0;HaplotypeScore=99.7894;InbreedingCoeff=0.9937;MQ=86.77;MQ0=0;MQRankSum=-5.326;QD=32.03;ReadPosRankSum=-0.676;VQSLOD=3.6342;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:27:60.20:960,60,0	0/0:7,0:7:21.07:0,21,495	0/0:27,0:27:62:0,62,1223	0/0:21,0:21:47.74:0,48,1092	0/0:31,0:31:90.30:0,90,2049	0/0:25,0:25:75.25:0,75,1709	0/0:27,0:27:81.26:0,81,1846	0/0:33,0:33:93.32:0,93,2110	0/0:18,0:18:54.14:0,54,1157	0/0:25,0:25:75.25:0,75,1684	0/0:12,0:12:33.11:0,33,778	0/0:31,0:31:90.31:0,90,2079	0/0:18,0:18:51.18:0,51,1163	0/0:27,0:27:81.26:0,81,1837	0/0:30,0:30:90.28:0,90,2038	0/0:28,0:28:81.22:0,81,1794	0/0:31,0:31:93.30:0,93,2095	0/0:18,0:18:54.14:0,54,1172	0/0:22,0:22:66.22:0,66,1479	0/0:19,0:19:57.20:0,57,1270	0/0:19,0:19:54.17:0,54,1206	0/0:9,0:9:27.09:0,27,637	0/0:16,0:16:42.62:0,43,992	0/0:29,0:28:87.28:0,87,1961	0/0:20,0:20:60.21:0,60,1392	0/0:34,0:34:99:0,102,2230	0/0:34,0:34:99:0,102,2208	0/0:9,0:9:27.09:0,27,602
chr10	71666647	.	C	CAG	770.59	PASS	AB=0.766;AC=8;AF=0.143;AN=56;BaseQRankSum=4.401;DP=677;FS=1.553;HRun=0;HaplotypeScore=114.8436;InbreedingCoeff=0.7317;MQ=51.36;MQ0=38;MQRankSum=1.922;QD=6.53;ReadPosRankSum=2.168;VQSLOD=3.2679;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:48.75:0,49,408	0/0:11,0:10:17.89:0,18,135	0/0:42,0:5:14.95:0,15,134	0/0:45,0:11:15.29:0,15,176	0/0:18,0:17:33.03:0,33,396	0/0:18,0:17:42.03:0,42,507	0/0:23,0:23:41.82:0,42,444	0/0:29,0:25:65.47:0,65,526	0/0:26,0:25:59.63:0,60,636	0/0:13,0:12:26.16:0,26,236	0/0:18,0:18:14.95:0,15,117	1/1:20,4:24:12.83:177,13,0	1/1:24,3:27:21.90:294,22,0	0/0:25,0:24:43.25:0,43,503	0/0:30,0:27:56.96:0,57,567	0/0:22,0:22:50.80:0,51,503	0/0:24,0:23:4.25:0,4,32	0/0:23,0:22:43.83:0,44,333	0/0:12,0:11:32.44:0,32,247	0/0:18,0:17:41.96:0,42,477	0/0:73,0:70:99:0,165,1800	1/1:21,2:22:26.63:252,27,0	0/1:18,1:18:2.97:37,0,3	0/1:7,18:24:0.78:161,0,1	0/0:13,0:13:14.97:0,15,122	0/0:22,0:21:59.87:0,60,642	0/0:13,0:11:23.96:0,24,292	0/0:5,0:5:0.89:0,1,75
chr10	71666653	.	CACACACACACAG	C	1934.96	PASS	AB=0.898;AC=23;AF=0.411;AN=56;BaseQRankSum=8.233;DP=680;FS=8.231;HRun=0;HaplotypeScore=188.2327;InbreedingCoeff=0.5630;MQ=50.27;MQ0=41;MQRankSum=-1.165;QD=6.16;ReadPosRankSum=0.962;VQSLOD=2.1524;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:32:86.42:86,0,281	1/1:12,0:11:9.02:135,9,0	0/0:39,0:4:8.52:0,9,43	0/0:41,0:9:3.57:0,4,48	0/0:17,0:16:24.06:0,24,931	0/0:16,0:15:35.78:0,36,1186	0/0:23,0:23:22.86:0,23,645	0/1:34,0:29:10.85:11,0,366	0/0:26,0:25:42.04:0,42,1386	1/1:14,0:13:28.48:238,28,0	1/1:20,0:20:14.06:80,14,0	1/1:8,16:24:5.45:211,5,0	1/1:6,21:27:7.66:223,8,0	0/0:26,0:25:5.72:0,6,1054	0/0:27,0:24:47.88:0,48,1293	0/0:19,0:19:26.12:0,26,822	1/1:24,0:22:5.91:97,6,0	1/1:26,0:24:36.67:234,37,0	0/1:13,0:12:9:9,0,258	0/0:16,0:15:20.41:0,20,439	0/0:73,0:70:99:0,108,3443	1/1:7,17:23:7.81:422,8,0	0/1:4,15:18:1.10:23,0,1	0/1:26,2:27:19.22:136,0,19	1/1:14,0:14:20.99:226,21,0	0/0:24,0:22:45.02:0,45,1573	0/0:14,0:12:23.56:0,24,602	0/0:5,0:5:15.05:0,15,548
chr10	71666663	.	CAG	C	1651.16	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=10.598;DP=668;FS=16.037;HRun=0;HaplotypeScore=109.9643;InbreedingCoeff=0.5143;MQ=48.53;MQ0=39;MQRankSum=1.893;QD=4.83;ReadPosRankSum=0.889;VQSLOD=2.0596;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,2:33:48.08:502,48,0	1/1:10,0:9:6.49:52,6,0	1/1:32,0:3:6.11:18,6,0	0/0:34,0:3:5.87:0,6,35	0/0:16,0:15:3.45:0,3,311	0/0:18,0:17:10.50:0,10,347	0/0:26,0:26:6.57:0,7,389	0/0:34,0:29:29.35:0,29,392	0/0:22,0:22:36.79:0,37,479	1/1:14,0:13:30.28:239,30,0	1/1:21,0:21:15.35:121,15,0	1/1:21,0:21:11.66:77,12,0	0/1:25,0:25:14.69:15,0,23	0/1:29,0:28:11.09:11,0,364	0/0:25,0:22:2.92:0,3,351	0/0:22,0:22:34.50:0,34,390	1/1:3,22:23:8.94:70,9,0	1/1:22,0:20:49.49:362,49,0	0/0:14,0:12:6.17:0,6,122	0/0:18,0:17:14.92:0,15,255	0/0:72,0:70:25.81:0,26,1188	1/1:22,0:21:16.51:90,17,0	0/1:18,0:17:15.19:23,0,15	0/1:25,0:24:21.04:57,0,21	1/1:15,0:14:23.98:202,24,0	0/1:26,0:24:11.60:12,0,456	0/0:15,0:13:28.33:0,28,256	0/0:10,0:10:21.59:0,22,186
chr10	71666665	.	GAC	G	95.08	PASS	AB=1.000;AC=17;AF=0.327;AN=52;BaseQRankSum=4.941;DP=670;FS=7.156;HRun=0;HaplotypeScore=117.4974;InbreedingCoeff=0.3644;MQ=48.50;MQ0=36;MQRankSum=-1.430;QD=0.39;ReadPosRankSum=1.522;VQSLOD=1.6945;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:34:19.08:66,0,19	0/0:11,0:10:4.87:0,5,42	./.	./.	0/0:16,0:15:8.18:0,8,257	0/0:19,0:18:29.09:0,29,358	0/0:25,0:25:40.47:0,40,539	0/0:34,1:29:28.32:0,28,552	0/0:24,0:24:41.77:0,42,536	0/1:13,0:12:0.50:1,0,12	1/1:21,0:21:0.38:1,0,0	1/1:21,0:21:5.76:23,6,0	0/1:25,0:25:6.26:6,0,17	0/0:27,0:26:27.81:0,28,399	0/0:24,1:22:0.07:0,0,417	0/0:21,0:21:41.75:0,42,561	1/1:25,0:23:2.33:12,2,0	0/1:22,0:20:0.54:1,0,1	0/0:13,0:10:10.18:0,10,95	0/0:17,0:16:21.25:0,21,269	0/0:73,0:70:62.44:0,62,1252	1/1:21,0:20:10.76:47,11,0	1/1:18,0:17:0.46:1,0,0	0/0:26,0:25:5.36:0,5,38	1/1:15,0:14:0.33:1,0,0	0/1:26,0:24:63.58:64,0,514	0/0:13,2:13:17.82:0,18,257	0/0:10,0:10:28.89:0,29,348
chr10	71666685	.	CAG	C	1400.17	PASS	AB=0.957;AC=21;AF=0.375;AN=56;BaseQRankSum=11.237;DP=663;FS=0.000;HRun=0;HaplotypeScore=121.4388;InbreedingCoeff=0.2151;MQ=51.10;MQ0=25;MQRankSum=0.312;QD=3.99;ReadPosRankSum=-1.330;VQSLOD=2.4137;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:34:62.68:449,63,0	1/1:17,0:16:3.65:36,4,0	0/1:15,0:7:34.87:35,0,87	0/1:20,0:6:4.27:59,0,4	0/0:18,0:17:32.58:0,33,300	0/0:23,0:22:55.36:0,55,609	0/0:24,0:24:32.88:0,33,725	0/0:42,0:39:39.66:0,40,706	0/0:23,0:23:7.64:0,8,654	1/1:17,0:16:13.72:207,14,0	0/1:3,22:25:0.48:0,0,20	0/1:25,0:25:34.81:35,0,79	0/1:22,0:22:29.85:30,0,56	0/0:27,0:26:31.32:0,31,529	0/0:25,0:22:10.44:0,10,520	0/0:18,0:18:41.98:0,42,697	1/1:20,0:18:12.38:89,12,0	1/1:27,0:25:61.44:453,61,0	0/0:12,0:8:16.42:0,16,181	0/1:12,0:12:15.29:15,0,318	0/0:67,0:63:51.49:0,51,1545	0/1:23,0:22:3.59:4,0,55	0/1:18,0:18:16.34:16,0,111	0/1:26,0:25:24.08:24,0,123	0/1:16,0:15:61.07:124,0,61	0/1:31,0:30:0.05:0,0,662	0/0:16,0:14:29.72:0,30,391	0/0:16,0:16:27.14:0,27,529
chr10	71666690	.	A	ACA	1346.46	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=3.776;DP=665;FS=2.157;HRun=0;HaplotypeScore=129.0735;InbreedingCoeff=0.6264;MQ=54.11;MQ0=23;MQRankSum=0.276;QD=7.28;ReadPosRankSum=-1.277;VQSLOD=3.2533;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:38:58.59:732,59,0	1/1:4,9:13:2.99:33,3,0	0/0:20,0:12:15.88:0,16,154	0/1:27,0:11:3.33:3,0,54	0/0:19,0:18:20.08:0,20,217	0/0:24,0:23:47.35:0,47,536	0/0:26,0:26:49:0,49,520	0/0:42,0:39:49.78:0,50,538	0/0:21,0:21:46.91:0,47,519	1/1:17,0:17:24.07:353,24,0	0/1:25,0:25:23.38:23,0,30	0/0:25,0:25:18.04:0,18,199	0/0:21,0:21:13.66:0,14,125	0/0:26,0:25:34.10:0,34,443	0/0:25,0:22:30.19:0,30,385	0/0:17,0:17:36.09:0,36,413	1/1:23,0:21:12:153,12,0	1/1:23,0:21:3.41:36,3,0	0/0:13,0:9:17.21:0,17,196	0/0:13,0:13:21.06:0,21,247	0/0:62,0:58:98.69:0,99,1103	0/0:23,0:22:26.23:0,26,242	0/0:17,0:17:17.44:0,17,177	0/0:22,0:22:16.72:0,17,189	0/1:15,0:15:97.18:179,0,97	0/0:31,0:30:65.56:0,66,682	0/0:17,0:15:27.06:0,27,304	0/0:16,0:16:37.18:0,37,405
chr10	71667424	.	CTG	C	964.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.258;DP=709;FS=8.279;HRun=0;HaplotypeScore=95.3453;InbreedingCoeff=0.9698;MQ=76.67;MQ0=0;MQRankSum=-1.835;QD=33.27;ReadPosRankSum=3.318;VQSLOD=5.8778;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,2229	0/0:10,0:10:30.10:0,30,562	0/0:17,0:17:51.17:0,51,956	0/0:26,0:26:72.21:0,72,1228	0/0:26,0:26:75.24:0,75,1371	0/0:21,0:21:54.19:0,54,1010	0/0:24,0:24:72.25:0,72,1347	0/0:29,0:29:81.27:0,81,1479	0/0:34,0:34:99:0,99,1800	0/0:27,0:27:81.27:0,81,1479	0/0:19,0:19:57.20:0,57,1067	0/0:34,0:34:99:0,99,1801	0/0:20,0:20:57.20:0,57,1053	0/0:28,0:28:84.29:0,84,1572	0/0:32,0:32:96.33:0,96,1775	0/0:29,0:29:84.27:0,84,1526	0/0:31,0:31:87.30:0,87,1619	1/1:1,28:29:72.24:1060,72,0	0/0:14,0:14:42.13:0,42,749	0/0:28,0:28:77.90:0,78,1383	0/0:46,0:46:99:0,132,2281	0/0:24,0:24:65.25:0,65,1170	0/0:13,0:13:39.13:0,39,729	0/0:31,0:31:93.25:0,93,1604	0/0:16,0:16:48.16:0,48,888	0/0:24,0:24:69.24:0,69,1288	0/0:31,0:30:93.32:0,93,1711	0/0:4,0:4:12.04:0,12,225
chr10	71668329	.	GGCA	G	2845.53	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.398;DP=629;FS=5.265;HRun=0;HaplotypeScore=94.0724;InbreedingCoeff=0.9936;MQ=91.68;MQ0=0;MQRankSum=-3.340;QD=25.41;ReadPosRankSum=1.704;VQSLOD=3.4765;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:66.21:0,66,1327	1/1:2,13:15:39.13:574,39,0	0/0:31,0:31:63.21:0,63,1201	0/0:23,0:23:36.09:0,36,669	0/0:22,0:22:30.10:0,30,621	0/0:30,0:30:69.22:0,69,1378	0/0:16,0:16:39.13:0,39,809	0/0:27,0:27:51.17:0,51,1023	0/0:25,0:25:63.22:0,63,1280	1/1:9,11:20:33.06:443,33,0	1/1:12,12:24:29.77:440,30,0	0/0:19,0:19:54.19:0,54,1119	0/0:16,0:16:36.12:0,36,734	0/0:22,0:22:60.21:0,60,1228	0/0:38,0:38:78.27:0,78,1617	0/0:25,0:25:66.18:0,66,1257	1/1:4,10:14:27.09:398,27,0	1/1:5,14:19:39.13:567,39,0	0/0:19,0:19:39.13:0,39,799	0/0:10,0:10:21.07:0,21,413	0/0:36,0:36:87.30:0,87,1803	0/0:18,0:18:27.09:0,27,549	0/0:17,0:17:18.05:0,18,336	0/0:29,0:29:81.28:0,81,1680	1/1:6,14:20:42.14:611,42,0	0/0:29,0:29:51.18:0,51,1049	0/0:22,0:22:60.21:0,60,1244	0/0:8,0:8:15.05:0,15,311
chr10	71668942	.	GA	G	6699.51	PASS	AB=0.900;AC=25;AF=0.446;AN=56;BaseQRankSum=16.843;DP=636;FS=9.172;HRun=9;HaplotypeScore=70.5132;InbreedingCoeff=0.9249;MQ=73.86;MQ0=0;MQRankSum=-2.365;QD=22.11;ReadPosRankSum=4.308;VQSLOD=5.3945;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:75.04:686,75,0	1/1:0,8:8:24.01:220,24,0	0/0:13,0:13:30.03:0,30,318	0/1:16,2:18:35.92:36,0,296	0/0:27,0:27:72.21:0,72,831	0/0:29,0:29:81.22:0,81,916	0/0:21,0:21:51.12:0,51,567	0/0:35,0:35:78.22:0,78,892	0/0:14,0:14:42.12:0,42,484	1/1:3,29:32:87.02:791,87,0	1/1:2,20:22:57.03:522,57,0	1/1:5,19:24:45.02:412,45,0	1/1:3,23:26:66.03:604,66,0	0/0:21,0:21:48.14:0,48,547	0/0:24,0:24:66.20:0,66,761	0/0:20,0:20:60.18:0,60,693	1/1:1,21:22:60.03:549,60,0	1/1:3,22:25:63.03:576,63,0	0/0:19,0:19:45.13:0,45,519	0/0:34,1:35:65.77:0,66,997	0/0:6,0:6:15.04:0,15,173	1/1:3,21:24:60.03:549,60,0	1/1:4,27:31:78.04:714,78,0	1/1:2,19:21:54.02:494,54,0	1/1:2,22:24:60.02:546,60,0	0/0:29,0:30:81.07:0,81,908	0/0:31,0:31:72.20:0,72,820	0/0:8,0:8:24.07:0,24,274
chr10	71669134	.	G	GT	6067.58	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=3.192;DP=647;FS=2.088;HRun=1;HaplotypeScore=70.2468;InbreedingCoeff=0.9933;MQ=89.10;MQ0=0;MQRankSum=-2.905;QD=40.18;ReadPosRankSum=2.776;VQSLOD=5.6185;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.18:0,60,764	1/1:0,8:9:27.09:402,27,0	0/0:20,0:20:60.19:0,60,776	0/0:31,0:31:81.16:0,81,994	0/0:27,0:27:78.25:0,78,1000	0/0:24,0:24:69.22:0,69,884	0/0:19,0:19:54.18:0,54,701	0/0:33,0:33:93.28:0,93,1179	0/0:25,0:25:72.22:0,72,920	1/1:2,41:43:99:1844,123,0	1/1:2,23:25:60.20:899,60,0	0/0:14,0:14:42.14:0,42,545	0/0:19,0:19:51.17:0,51,662	0/0:22,0:22:63.20:0,63,802	0/0:37,0:37:99:0,108,1402	0/0:17,0:17:51.15:0,51,648	1/1:0,32:32:84.28:1259,84,0	1/1:2,26:28:69.23:1034,69,0	0/0:24,0:24:72.23:0,72,934	0/0:31,0:30:87.28:0,87,1128	0/0:18,0:18:51.17:0,51,662	0/0:24,0:24:69.21:0,69,882	0/0:10,0:10:27.02:0,27,329	0/0:17,0:17:51.17:0,51,662	1/1:0,14:14:42.14:630,42,0	0/0:29,0:29:84.27:0,84,1079	0/0:28,0:28:84.23:0,84,1058	0/0:4,0:4:12.04:0,12,156
chr10	71670151	.	C	CAT	111.68	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=7.105;DP=897;FS=6.880;HRun=0;HaplotypeScore=203.7128;InbreedingCoeff=0.4769;MQ=57.24;MQ0=16;MQRankSum=-5.097;QD=2.11;ReadPosRankSum=-4.242;VQSLOD=1.1028;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,132,1759	0/1:19,0:19:38.74:39,0,124	0/0:52,0:20:35.36:0,35,637	0/0:52,0:22:64.74:0,65,888	0/0:27,0:27:78.25:0,78,1170	0/0:21,0:21:60.18:0,60,892	0/0:41,0:41:99:0,120,1722	0/0:37,0:35:99:0,102,1523	0/0:42,0:42:99:0,123,1838	0/0:29,0:29:12.90:0,13,304	0/0:27,0:27:40.69:0,41,254	0/0:40,0:40:99:0,102,1537	0/0:30,0:30:78.22:0,78,1154	0/0:33,0:33:99:0,99,1492	0/0:29,0:29:87.26:0,87,1289	0/0:35,0:35:99:0,102,1515	0/1:20,0:20:4.73:5,0,129	1/1:9,5:14:14.18:173,14,0	0/0:19,0:19:57.18:0,57,850	0/0:25,0:25:72.17:0,72,996	0/0:65,0:65:99:0,187,2785	0/0:28,0:28:66.10:0,66,988	0/0:14,0:14:29.98:0,30,434	0/0:51,0:51:77.91:0,78,1150	0/0:23,0:23:34.62:0,35,201	0/0:25,0:25:69.22:0,69,1036	0/0:29,0:29:84.27:0,84,1261	0/0:12,0:12:36.10:0,36,531
chr10	71670155	.	C	CATG	4421.45	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-8.795;DP=927;FS=6.395;HRun=0;HaplotypeScore=225.7965;InbreedingCoeff=-0.3465;MQ=55.53;MQ0=20;MQRankSum=-0.341;QD=5.40;ReadPosRankSum=8.988;VQSLOD=2.3606;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,30:57:51.15:943,51,0	1/1:23,0:23:0.85:161,1,0	0/0:52,0:19:5.85:0,6,36	0/0:56,0:21:8.59:0,9,57	0/1:29,0:29:90.41:167,0,90	0/1:21,0:21:61.93:62,0,117	0/1:40,0:40:55.04:55,0,176	1/1:39,0:36:29.88:240,30,0	0/1:43,0:43:98.06:98,0,297	1/1:29,0:29:32.92:400,33,0	1/1:28,0:28:11.24:95,11,0	0/1:44,0:44:44.91:199,0,45	0/1:28,0:28:78.94:79,0,162	0/1:36,0:36:99:241,0,182	0/1:28,0:28:30.87:31,0,117	0/1:35,0:35:52.18:52,0,181	1/1:22,0:22:12.04:196,12,0	1/1:18,0:18:23.88:244,24,0	0/1:19,0:18:5.23:68,0,5	0/1:23,0:23:28.33:28,0,164	0/1:68,0:68:99:311,0,363	0/1:28,0:28:5.91:166,0,6	1/1:14,0:14:5.99:49,6,0	0/1:50,0:50:93.25:175,0,93	1/1:31,0:31:19.86:169,20,0	0/1:24,0:24:61.43:61,0,72	0/1:31,0:31:99:103,0,209	0/1:11,0:11:26.18:26,0,74
chr10	71670184	.	T	TGAC	2960.03	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=12.683;DP=935;FS=13.256;HRun=0;HaplotypeScore=256.6708;InbreedingCoeff=0.8754;MQ=50.80;MQ0=24;MQRankSum=-2.516;QD=15.18;ReadPosRankSum=0.303;VQSLOD=1.8992;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:50,0:50:99:436,0,301	1/1:12,5:18:7.63:271,8,0	0/0:36,0:8:14.18:0,14,202	0/0:50,0:23:36.41:0,36,428	0/0:40,0:40:74.53:0,75,761	0/0:26,0:25:60.48:0,60,656	0/0:38,0:38:99:0,100,1029	0/0:31,0:26:46.12:0,46,365	0/0:39,0:39:87.70:0,88,1071	1/1:25,6:31:72.51:871,73,0	1/1:18,3:21:17.29:233,17,0	0/0:39,0:39:23.57:0,24,337	0/0:28,0:27:49.01:0,49,541	0/0:38,0:38:69.04:0,69,807	0/0:30,0:30:81.13:0,81,797	0/0:32,0:32:78.12:0,78,837	1/1:17,5:22:35.82:481,36,0	1/1:17,0:17:44.48:460,44,0	0/0:18,0:15:34.24:0,34,258	0/0:29,0:28:70.58:0,71,735	0/0:78,0:77:99:0,175,1829	0/0:38,0:37:25.51:0,26,230	0/0:16,0:15:15.91:0,16,124	0/0:48,0:48:33.59:0,34,403	1/1:30,6:36:28.88:395,29,0	0/0:28,0:27:67.82:0,68,654	0/0:35,0:35:83.05:0,83,911	0/0:23,0:23:46.24:0,46,439
chr10	71670193	.	TGAC	T	3849.93	PASS	AB=0.994;AC=20;AF=0.357;AN=56;BaseQRankSum=-14.924;DP=912;FS=9.691;HRun=0;HaplotypeScore=253.6426;InbreedingCoeff=-0.3584;MQ=51.54;MQ0=14;MQRankSum=1.980;QD=6.02;ReadPosRankSum=-9.474;VQSLOD=-0.6876;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:48,0:48:99:289,0,170	0/0:17,0:17:14.71:0,15,101	0/0:26,0:8:17.76:0,18,146	0/0:41,0:27:44.88:0,45,398	0/1:39,0:40:99:236,0,247	0/1:27,0:26:99:198,0,323	0/1:38,0:38:99:374,0,377	1/1:31,0:26:29.80:251,30,0	0/1:39,1:40:99:236,0,475	0/0:28,0:28:10.85:0,11,354	0/1:21,0:21:0:0,0,0	0/1:41,0:41:25.34:25,0,202	0/1:27,0:26:54.08:54,0,356	0/1:36,1:37:99:157,0,497	0/1:27,0:27:99:204,0,265	0/1:30,0:30:99:104,0,426	0/0:22,0:22:20.52:0,21,131	0/0:18,0:18:25.26:0,25,314	0/1:22,0:20:23.18:183,0,23	0/1:27,1:28:99:275,0,251	0/1:84,0:83:99:587,0,831	0/0:34,1:34:17.83:0,18,176	0/1:17,0:16:18.08:18,0,18	0/0:48,0:48:41.16:0,41,421	0/0:36,0:36:10.67:0,11,56	0/1:30,0:29:99:314,0,143	0/1:32,0:32:99:110,0,401	0/1:20,0:20:99:236,0,120
chr10	71670211	.	T	TGACGATGACGAC	4472.21	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.397;DP=880;FS=6.652;HRun=0;HaplotypeScore=403.1298;InbreedingCoeff=0.9235;MQ=68.35;MQ0=4;MQRankSum=-12.924;QD=38.22;ReadPosRankSum=-2.145;VQSLOD=2.7183;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,129,3367	1/1:12,2:14:20.50:416,20,0	0/0:30,0:21:56.25:0,56,1343	0/0:45,0:41:99:0,111,2796	0/0:27,0:27:75.19:0,75,2426	0/0:23,0:23:60.21:0,60,2181	0/0:41,0:41:99:0,114,3539	0/0:27,0:26:75.12:0,75,1589	0/0:37,0:37:99:0,105,3021	1/1:36,0:36:93.02:1639,93,0	0/0:8,1:9:0.05:0,0,1	0/0:36,0:36:35.87:0,36,913	0/0:25,0:25:54.15:0,54,1469	0/0:32,0:32:84.23:0,84,2658	0/0:30,0:30:84.23:0,84,2447	0/0:38,0:38:99:0,108,2960	1/1:19,1:20:37.18:695,37,0	1/1:16,4:20:51.09:1384,51,0	0/0:23,0:23:63.12:0,63,1384	0/0:36,0:36:99:0,102,3125	0/0:85,0:84:99:0,238,7109	0/0:32,0:31:9:0,9,181	0/0:14,0:14:7.25:0,7,166	0/0:39,0:39:24.10:0,24,776	1/1:27,0:27:13.15:339,13,0	0/0:37,0:36:99:0,105,3013	0/0:27,0:27:81.25:0,81,2513	0/0:19,0:19:56.32:0,56,1504
chr10	71670228	.	TGTAAG	T	6200.16	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.941;DP=807;FS=10.914;HRun=0;HaplotypeScore=239.0535;InbreedingCoeff=0.9984;MQ=80.14;MQ0=0;MQRankSum=-11.346;QD=45.26;ReadPosRankSum=-4.591;VQSLOD=2.7216;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,138,4268	0/0:10,0:10:27.56:0,28,609	0/0:29,0:29:87.30:0,87,2459	0/0:37,0:36:99:0,108,3053	0/0:27,0:27:78.22:0,78,2365	0/0:22,0:22:63.22:0,63,1937	0/0:32,0:32:96.33:0,96,2971	0/0:36,0:36:99:0,105,3232	0/0:31,0:31:87.30:0,87,2688	0/0:29,0:29:84.24:0,84,1945	0/0:9,0:9:23.27:0,23,595	1/1:1,37:38:99:2173,102,0	1/1:2,20:22:51:1086,51,0	0/0:34,0:34:99:0,99,3067	0/0:29,0:29:84.29:0,84,2579	0/0:38,0:38:99:0,114,3452	0/0:11,0:11:24.08:0,24,569	0/0:20,0:20:42.14:0,42,1040	0/0:23,0:23:57.20:0,57,1733	0/0:37,0:37:99:0,108,3348	0/0:76,0:76:99:0,229,6978	1/1:0,30:30:78.27:1661,78,0	1/1:1,13:14:27.56:575,28,0	1/1:7,26:33:33.58:704,34,0	0/0:15,0:15:36.12:0,36,915	0/0:34,0:34:99:0,99,2963	0/0:27,0:27:81.28:0,81,2530	0/0:14,0:14:42.14:0,42,1315
chr10	71670262	.	A	ACAC	6633.06	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-0.717;DP=813;FS=3.399;HRun=0;HaplotypeScore=164.8282;InbreedingCoeff=0.9999;MQ=87.09;MQ0=0;MQRankSum=-6.217;QD=53.93;ReadPosRankSum=0.653;VQSLOD=6.3174;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,153,2445	1/1:0,11:11:33.11:745,33,0	0/0:31,0:31:74.32:0,74,1098	0/0:30,0:30:83.68:0,84,1110	0/0:28,0:28:72.21:0,72,1144	0/0:27,0:27:78.24:0,78,1221	0/0:34,0:34:96.24:0,96,1401	0/0:30,0:30:81.23:0,81,1187	0/0:32,0:32:94.19:0,94,1518	1/1:4,33:38:99:2149,105,0	1/1:0,11:12:33.11:726,33,0	0/0:37,0:37:99:0,105,1609	0/0:24,0:24:66.19:0,66,1045	0/0:29,0:29:87.27:0,87,1395	0/0:28,0:28:81.26:0,81,1321	0/0:36,0:36:99:0,108,1792	1/1:2,20:22:51.17:1119,51,0	1/1:1,14:17:39.13:882,39,0	0/0:25,0:25:69.21:0,69,1098	0/0:30,0:30:84.29:0,84,1386	0/0:65,0:64:99:0,178,2827	0/0:29,0:29:87.19:0,87,1282	0/0:19,0:19:54:0,54,787	0/0:22,0:22:48.15:0,48,759	1/1:3,18:23:45.15:1013,45,0	0/0:37,0:37:77.34:0,77,1501	0/0:29,0:29:87.30:0,87,1432	0/0:16,0:16:48.15:0,48,766
chr10	71670996	.	C	CCT	4623.33	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-10.648;DP=625;FS=0.865;HRun=0;HaplotypeScore=73.3105;InbreedingCoeff=0.9997;MQ=92.02;MQ0=0;MQRankSum=-1.239;QD=44.46;ReadPosRankSum=3.227;VQSLOD=6.6003;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1485	1/1:0,10:10:30.10:519,30,0	0/0:32,0:32:75.21:0,75,969	0/0:24,0:24:54.11:0,54,695	0/0:23,0:23:66.18:0,66,859	0/0:20,0:20:57.19:0,57,759	0/0:27,0:27:72.22:0,72,942	0/0:24,0:24:57.14:0,57,725	0/0:13,0:13:36.08:0,36,459	1/1:6,26:32:81.17:1305,81,0	1/1:1,10:11:30.10:519,30,0	0/0:15,0:15:42.12:0,42,532	0/0:20,0:20:57.16:0,57,727	0/0:27,0:27:78.24:0,78,1023	0/0:15,0:15:42.14:0,42,559	0/0:19,0:19:51.17:0,51,679	1/1:1,16:18:38.85:721,39,0	1/1:1,17:18:51.17:883,51,0	0/0:23,0:23:66.22:0,66,877	0/0:22,0:22:60.19:0,60,788	0/0:30,0:30:87.25:0,87,1115	0/0:31,0:31:81.26:0,81,1064	0/0:19,0:19:48.16:0,48,639	0/0:19,0:19:57.16:0,57,730	1/1:2,13:15:39.13:675,39,0	0/0:29,0:29:81.26:0,81,1064	0/0:32,0:32:90.29:0,90,1184	0/0:17,0:17:51.15:0,51,663
chr10	71671099	.	ATTTGTGTGTGTG	A	35.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.316;DP=549;FS=2.406;HRun=0;HaplotypeScore=166.9857;InbreedingCoeff=0.7802;MQ=68.54;MQ0=7;MQRankSum=1.002;QD=0.92;ReadPosRankSum=0.622;VQSLOD=2.7290;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:38:3.01:112,3,0	0/0:11,0:11:29.81:0,30,512	0/0:28,0:19:26.52:0,27,307	0/0:24,0:15:43.50:0,44,434	0/0:16,0:17:46.87:0,47,976	0/0:17,0:16:42.06:0,42,926	0/0:27,0:27:74.65:0,75,1387	0/0:23,0:23:66.11:0,66,917	0/0:10,0:10:23.95:0,24,592	0/0:17,0:17:51.15:0,51,1920	0/0:8,0:8:18.04:0,18,547	0/0:18,0:18:47.07:0,47,999	0/0:17,0:17:48.06:0,48,1744	0/0:19,0:19:45.11:0,45,1585	0/0:13,0:13:33.07:0,33,807	0/0:23,0:23:49:0,49,1397	0/0:24,0:24:59.62:0,60,873	0/0:17,0:17:42.06:0,42,1268	0/0:29,0:29:78.99:0,79,1380	0/0:15,0:15:38.93:0,39,714	0/0:33,0:32:84.04:0,84,1457	0/0:15,0:15:42.08:0,42,1123	0/0:20,0:20:49.28:0,49,1533	0/0:25,0:25:69.13:0,69,2064	0/0:19,0:19:53.97:0,54,674	0/0:16,0:15:42.06:0,42,1082	0/0:18,0:17:42.03:0,42,610	0/0:8,0:8:24.03:0,24,679
chr10	71671101	.	T	TTGTG	2869.14	PASS	AB=0.862;AC=30;AF=0.600;AN=50;BaseQRankSum=0.452;DP=604;FS=3.382;HRun=0;HaplotypeScore=108.8027;InbreedingCoeff=0.4887;MQ=63.88;MQ0=9;MQRankSum=-0.999;QD=7.97;ReadPosRankSum=-3.855;VQSLOD=0.8753;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:1.55:0,2,4	1/1:7,4:13:5.95:122,6,0	./.	./.	1/1:10,5:19:11.76:176,12,0	0/1:18,0:17:18.05:18,0,40	0/1:29,1:29:3.17:145,0,3	./.	0/1:8,4:13:0:0,0,0	1/1:22,0:22:29.38:527,29,0	1/1:10,0:10:8.87:137,9,0	0/0:19,0:19:3.01:0,3,45	0/0:20,0:20:9.03:0,9,139	1/1:11,4:23:20.27:313,20,0	1/1:10,4:16:6.02:141,6,0	0/1:15,0:22:36.64:51,0,37	1/1:17,1:26:9.03:192,9,0	0/0:13,0:16:15.06:0,15,222	1/1:29,4:35:20.83:323,21,0	0/0:19,0:19:3.01:0,3,46	1/1:36,0:35:9:154,9,0	0/0:18,0:18:9.02:0,9,118	0/0:22,0:22:8.91:0,9,94	0/0:25,0:25:9.03:0,9,139	1/1:21,2:23:3.01:70,3,0	1/1:17,6:23:29.71:477,30,0	1/1:16,4:19:3.01:70,3,0	1/1:10,0:9:8.99:117,9,0
chr10	71671916	.	CT	C	2127.98	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.392;DP=551;FS=0.000;HRun=7;HaplotypeScore=61.5636;InbreedingCoeff=0.9932;MQ=79.01;MQ0=0;MQRankSum=-2.299;QD=23.64;ReadPosRankSum=1.713;VQSLOD=3.8235;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.25:0,93,1128	1/1:1,4:5:12.03:122,12,0	0/0:17,0:17:35.46:0,35,418	0/0:15,0:15:35.52:0,36,371	0/0:25,0:25:69.22:0,69,867	0/0:25,0:25:69.22:0,69,868	0/0:13,0:13:39.12:0,39,491	0/0:32,0:32:87.25:0,87,1060	0/0:19,0:19:54.16:0,54,666	1/1:3,20:23:60.11:600,60,0	1/1:1,15:16:36.06:367,36,0	0/0:23,0:23:69.21:0,69,857	0/0:12,0:12:33.10:0,33,403	0/0:14,0:14:33.10:0,33,404	0/0:9,0:9:27.08:0,27,328	0/0:22,0:22:57.18:0,57,717	1/1:3,17:20:45.10:459,45,0	1/1:1,11:12:33.08:337,33,0	0/0:18,0:18:42.13:0,42,528	0/0:37,0:37:99:0,99,1223	0/0:18,0:18:51.16:0,51,642	0/0:26,0:26:78.24:0,78,970	0/0:20,0:20:54.17:0,54,679	0/0:30,0:30:84.25:0,84,1033	1/1:0,14:14:42.10:429,42,0	0/0:20,0:20:51.16:0,51,642	0/0:22,0:22:63.19:0,63,779	0/0:11,0:11:33.07:0,33,398
chr10	71672376	.	G	GC	423.64	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=-0.212;DP=561;FS=8.734;HRun=1;HaplotypeScore=89.6308;InbreedingCoeff=0.5245;MQ=47.24;MQ0=32;MQRankSum=0.253;QD=16.29;ReadPosRankSum=-1.547;VQSLOD=2.6760;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:22:0.31:498,0,0	0/0:4,0:4:12.04:0,12,155	0/0:1,0:1:3.01:0,3,39	./.	0/0:23,0:21:36.11:0,36,467	0/0:24,0:24:57.19:0,57,740	0/0:24,0:20:57.07:0,57,690	0/0:32,0:29:84.14:0,84,1015	0/0:19,0:18:42.14:0,42,545	0/0:24,0:23:63.20:0,63,816	0/0:18,0:16:42.95:0,43,525	0/0:16,0:15:39.12:0,39,506	0/0:15,0:15:42.12:0,42,530	0/0:20,0:20:42.13:0,42,545	0/0:27,0:25:54.18:0,54,701	0/0:14,0:13:36.10:0,36,453	0/0:20,0:17:45.02:0,45,523	0/0:26,0:25:39.13:0,39,506	0/0:16,0:14:36.12:0,36,467	0/0:30,0:30:87.21:0,87,1102	0/0:36,0:31:53.99:0,54,625	0/0:15,0:15:36.12:0,36,467	0/0:13,0:13:35.72:0,36,448	0/0:16,0:13:30.10:0,30,388	0/0:10,0:10:30.10:0,30,389	0/0:25,0:21:57.19:0,57,740	0/0:37,0:35:90.29:0,90,1168	0/0:28,0:26:66.21:0,66,857
chr10	71672396	.	A	ATT	2355.79	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.618;DP=551;FS=0.573;HRun=0;HaplotypeScore=93.6011;InbreedingCoeff=0.9309;MQ=48.18;MQ0=28;MQRankSum=-8.676;QD=42.83;ReadPosRankSum=-0.249;VQSLOD=5.0896;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:21:36.12:0,36,579	1/1:1,5:6:18.02:232,18,0	0/0:2,0:2:6.02:0,6,98	0/0:6,0:1:2.98:0,3,22	0/0:24,0:22:44.86:0,45,731	0/0:24,0:24:57.19:0,57,930	0/0:19,0:18:51.09:0,51,760	0/0:26,0:23:69.24:0,69,1124	0/0:18,0:17:39.12:0,39,614	1/1:1,16:16:48.16:938,48,0	1/1:4,11:14:42.07:630,42,0	0/0:20,0:19:48.16:0,48,783	0/0:14,0:14:39.13:0,39,633	0/0:21,0:21:48.16:0,48,770	0/0:25,0:23:51.17:0,51,832	0/0:20,0:19:51.17:0,51,829	1/1:4,7:8:24.08:440,24,0	0/0:25,0:23:27.01:0,27,382	0/0:20,0:18:54.18:0,54,878	0/0:27,0:27:78.24:0,78,1224	0/0:31,0:27:42.14:0,42,674	0/0:16,0:16:39.12:0,39,613	0/0:15,0:15:41.86:0,42,685	0/0:15,0:12:24.07:0,24,368	1/1:0,5:5:15.05:288,15,0	0/0:31,0:27:78.27:0,78,1256	0/0:41,0:40:99:0,108,1755	0/0:31,0:29:75.21:0,75,1172
chr10	71672398	.	C	CAGATGGT	5254.90	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.717;DP=548;FS=0.000;HRun=0;HaplotypeScore=124.3476;InbreedingCoeff=0.9278;MQ=49.51;MQ0=28;MQRankSum=-9.915;QD=103.04;ReadPosRankSum=0.625;VQSLOD=6.4571;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:19:30.10:0,30,776	1/1:0,5:5:15.05:548,15,0	0/0:3,0:2:6.02:0,6,168	0/0:7,0:2:3.01:0,3,66	0/0:25,0:23:48.15:0,48,1282	0/0:24,0:24:57.20:0,57,1594	0/0:17,0:16:45.14:0,45,1195	0/0:26,0:23:69.20:0,69,1859	0/0:18,0:17:38.95:0,39,1024	1/1:1,16:16:48.16:1935,48,0	1/1:3,11:12:36.12:1342,36,0	0/0:20,0:20:51.16:0,51,1367	0/0:14,0:14:39.13:0,39,1090	0/0:21,0:21:44.99:0,45,1258	0/0:24,0:22:51.18:0,51,1426	0/0:21,0:20:51.18:0,51,1394	1/1:3,7:7:21.07:837,21,0	0/0:22,0:20:24.08:0,24,623	0/0:23,0:19:54.19:0,54,1440	0/0:28,0:28:78.26:0,78,2104	0/0:31,0:27:45.11:0,45,1188	0/0:16,0:16:42.14:0,42,1108	0/0:15,0:15:42.14:0,42,1174	0/0:14,0:11:21.07:0,21,587	1/1:0,5:5:15.05:593,15,0	0/0:32,0:29:78.25:0,78,2004	0/0:42,0:41:99:0,111,2984	0/0:31,0:29:75.26:0,75,2066
chr10	71672464	.	T	TAATA	3871.04	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.673;DP=481;FS=5.133;HRun=0;HaplotypeScore=89.7607;InbreedingCoeff=0.9677;MQ=52.67;MQ0=0;MQRankSum=-5.973;QD=38.71;ReadPosRankSum=-1.050;VQSLOD=2.9237;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,8:17:24.08:533,24,0	1/1:5,3:8:12.04:267,12,0	0/0:11,0:7:12.04:0,12,205	0/0:11,0:8:15.05:0,15,239	0/0:27,0:27:69.22:0,69,1148	0/0:23,0:23:66.21:0,66,1096	0/0:14,0:14:30.08:0,30,460	0/0:49,0:41:96.29:0,96,1563	0/0:15,0:15:33.11:0,33,554	1/1:6,9:16:33.11:774,33,0	1/1:14,3:17:15.05:309,15,0	0/0:14,0:14:36.12:0,36,605	0/0:6,0:6:18.06:0,18,307	0/0:17,0:17:39.13:0,39,650	0/0:15,0:15:39.13:0,39,665	0/0:17,0:17:36.11:0,36,588	1/1:4,8:12:21.07:524,21,0	1/1:6,8:13:24.08:599,24,0	0/0:18,0:17:33.10:0,33,539	0/0:36,0:36:90.31:0,90,1506	0/0:7,0:7:12.04:0,12,205	0/0:11,0:11:12.04:0,12,202	0/0:18,0:18:42.14:0,42,716	0/0:9,0:9:20.68:0,21,358	1/1:4,11:15:36.12:866,36,0	0/0:28,0:28:51.17:0,51,865	0/0:26,0:26:54.18:0,54,921	0/0:9,0:9:27.09:0,27,460
chr10	71673147	.	AT	A	5241.72	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=17.421;DP=598;FS=18.155;HRun=1;HaplotypeScore=109.3747;InbreedingCoeff=0.9938;MQ=72.89;MQ0=0;MQRankSum=-16.227;QD=36.91;ReadPosRankSum=-1.502;VQSLOD=2.7420;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:39.09:520,39,0	1/1:0,4:4:12.04:167,12,0	0/0:12,0:12:36.08:0,36,507	0/0:14,0:14:39.10:0,39,572	0/0:27,0:27:81.26:0,81,1217	0/0:19,0:19:57.16:0,57,829	0/0:23,0:23:69.19:0,69,991	0/0:27,0:27:81.25:0,81,1179	0/0:20,0:20:60.19:0,60,893	1/1:1,35:36:99:1481,108,0	1/1:0,33:33:96.23:1289,96,0	0/0:17,0:17:51.15:0,51,758	0/0:20,0:20:60.17:0,60,875	0/0:15,0:15:45.14:0,45,668	0/0:19,0:19:57.18:0,57,851	0/0:25,0:25:75.24:0,75,1127	1/1:0,15:15:33.07:436,33,0	1/1:0,13:13:30.10:413,30,0	0/0:14,0:14:42.04:0,42,591	0/0:24,0:24:72.21:0,72,1059	0/0:25,0:25:75.25:0,75,1145	0/0:27,0:27:78.24:0,78,1152	0/0:30,0:30:90.27:0,90,1334	0/0:21,0:21:60.18:0,60,895	1/1:0,25:25:69.19:935,69,0	0/0:35,2:37:24.56:0,25,1401	0/0:30,0:30:90.27:0,90,1325	0/0:10,0:10:30.05:0,30,392
chr10	71673599	.	A	AC	4997.44	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.660;DP=630;FS=0.366;HRun=3;HaplotypeScore=75.5266;InbreedingCoeff=0.9975;MQ=70.35;MQ0=0;MQRankSum=0.765;QD=31.83;ReadPosRankSum=2.191;VQSLOD=5.0867;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,56:61:99:2067,150,0	0/0:9,0:9:21.04:0,21,230	0/0:15,0:12:27.07:0,27,307	0/0:13,0:13:32.99:0,33,323	0/0:28,0:28:84.23:0,84,975	0/0:24,0:24:69.14:0,69,779	0/0:18,0:18:48.14:0,48,565	0/0:32,0:32:75.87:0,76,929	0/0:9,0:9:24.07:0,24,287	0/0:29,0:29:84.21:0,84,967	0/0:18,0:18:51.15:0,51,598	1/1:1,18:19:45.15:620,45,0	1/1:2,12:14:21.07:281,21,0	0/0:16,0:16:45.09:0,45,504	0/0:24,0:24:69.17:0,69,785	0/0:19,0:19:54.16:0,54,632	0/0:33,0:33:96.19:0,96,1084	0/0:18,0:18:54.13:0,54,630	0/0:27,0:27:75.14:0,75,844	0/0:18,0:18:54.15:0,54,631	0/0:18,0:18:54.17:0,54,646	1/1:2,10:12:30.01:378,30,0	1/1:0,31:31:77.77:949,78,0	1/1:1,19:20:51.17:703,51,0	0/0:31,0:31:87.20:0,87,1011	0/0:31,0:31:87.23:0,87,1006	0/0:30,0:30:87.22:0,87,1004	0/0:13,0:13:33.10:0,33,395
chr10	71673786	.	TAG	T	1754.40	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.562;DP=663;FS=15.384;HRun=0;HaplotypeScore=108.2500;InbreedingCoeff=0.9983;MQ=79.23;MQ0=0;MQRankSum=-4.891;QD=42.79;ReadPosRankSum=1.255;VQSLOD=4.0603;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:41:99:1849,114,0	0/0:11,0:11:30.10:0,30,599	0/0:12,0:12:36.09:0,36,582	0/0:19,0:19:48.32:0,48,677	0/0:27,0:27:81.28:0,81,1604	0/0:25,0:25:75.26:0,75,1499	0/0:24,0:24:72.25:0,72,1438	0/0:24,0:24:72.25:0,72,1413	0/0:23,0:23:69.24:0,69,1377	0/0:31,0:31:93.32:0,93,1826	0/0:21,0:21:63.20:0,63,1192	0/0:27,0:27:81.28:0,81,1619	0/0:20,0:20:60.21:0,60,1197	0/0:26,0:26:78.27:0,78,1559	0/0:32,0:32:96.33:0,96,1919	0/0:32,0:32:96.33:0,96,1875	0/0:27,0:27:81.26:0,81,1567	0/0:20,0:20:60.16:0,60,1145	0/0:22,0:22:63.22:0,63,1226	0/0:26,0:26:78.25:0,78,1522	0/0:20,0:20:60.21:0,60,1198	0/0:17,0:17:51.18:0,51,1018	0/0:19,0:19:57.18:0,57,1085	0/0:20,0:20:60.21:0,60,1197	0/0:15,0:15:45.15:0,45,890	0/0:35,0:35:99:0,105,2016	0/0:38,0:37:99:0,114,2243	0/0:9,0:9:27.09:0,27,540
chr10	71674347	.	T	TAA	930.73	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.663;DP=404;FS=1.410;HRun=9;HaplotypeScore=62.1074;InbreedingCoeff=0.8587;MQ=64.22;MQ0=6;MQRankSum=-1.113;QD=24.49;ReadPosRankSum=1.758;VQSLOD=3.1624;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:17:37.43:128,37,0	0/0:5,0:5:15.04:0,15,160	0/0:8,0:7:15.01:0,15,158	0/0:13,0:12:20.33:0,20,283	0/0:16,0:16:33.06:0,33,351	0/0:31,0:31:80.98:0,81,853	0/0:5,0:4:12.03:0,12,128	0/0:32,0:28:69.59:0,70,718	0/0:11,0:11:27.06:0,27,287	0/0:24,0:24:60.14:0,60,632	0/0:17,0:16:42.09:0,42,447	0/0:8,0:8:21.05:0,21,224	0/0:7,0:7:17.91:0,18,175	0/0:9,0:9:18.04:0,18,192	0/0:18,0:18:51.13:0,51,543	0/0:12,0:12:30.04:0,30,311	0/0:19,0:18:48.04:0,48,497	1/1:1,20:21:60.20:923,60,0	0/0:17,0:16:39.09:0,39,415	0/0:16,0:16:39.06:0,39,407	0/0:4,0:4:12.03:0,12,128	0/0:2,0:1:3.01:0,3,32	0/0:11,0:10:30.07:0,30,319	0/0:7,0:7:15.04:0,15,160	0/0:15,0:15:39.05:0,39,403	0/0:23,0:22:60.12:0,60,632	0/0:19,0:20:53.87:0,54,554	0/0:15,0:15:42.02:0,42,425
chr10	71674942	.	A	ATGG	553.40	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=6.110;DP=233;FS=62.369;HRun=0;HaplotypeScore=39.0482;InbreedingCoeff=0.8410;MQ=48.40;MQ0=15;MQRankSum=-5.964;QD=34.59;ReadPosRankSum=0.768;VQSLOD=1.3534;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:4:9.03:0,9,168	1/1:0,3:3:9.03:148,9,0	./.	./.	0/0:15,0:15:42.14:0,42,783	0/0:11,0:11:33.11:0,33,610	0/0:7,0:6:18.06:0,18,319	0/0:23,0:12:33.11:0,33,615	0/0:3,0:3:9.03:0,9,168	1/1:1,1:1:3.01:55,3,0	1/1:0,2:2:6.02:91,6,0	0/0:7,0:7:18.02:0,18,293	0/0:8,0:8:24.08:0,24,447	0/0:9,0:9:27.09:0,27,503	0/0:11,0:10:30.07:0,30,522	0/0:9,0:9:24.08:0,24,447	1/1:0,3:3:9.03:144,9,0	1/1:0,2:2:6.01:80,6,0	0/0:15,0:11:33.10:0,33,586	0/0:9,0:9:27.09:0,27,496	0/0:8,0:8:24.07:0,24,404	0/0:7,0:7:21.04:0,21,356	0/0:7,0:7:21.07:0,21,391	0/0:3,0:3:9.02:0,9,137	1/1:0,4:4:12.04:192,12,0	0/0:17,0:17:51.17:0,51,949	0/0:16,0:16:39.13:0,39,724	0/0:11,0:11:33.11:0,33,615
chr10	71674944	.	ATACCC	A	526.19	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=6.154;DP=226;FS=61.812;HRun=0;HaplotypeScore=45.7401;InbreedingCoeff=0.8090;MQ=51.30;MQ0=12;MQRankSum=-6.069;QD=32.89;ReadPosRankSum=0.998;VQSLOD=0.9893;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:4:9.03:0,9,296	1/1:0,3:3:9.03:139,9,0	./.	0/0:8,0:3:6.02:0,6,131	0/0:15,0:15:42.14:0,42,1327	0/0:11,0:11:33.11:0,33,1083	0/0:7,0:6:15.05:0,15,491	0/0:23,0:12:36.12:0,36,1186	0/0:3,0:3:9.03:0,9,297	1/1:1,1:1:3.01:52,3,0	1/1:0,2:2:6.02:85,6,0	0/0:7,0:7:15.05:0,15,494	0/0:8,0:8:24.08:0,24,763	0/0:9,0:9:27.09:0,27,888	0/0:11,0:10:27.08:0,27,815	0/0:9,0:9:24.08:0,24,789	1/1:0,3:3:9.03:136,9,0	1/1:0,2:2:6.02:91,6,0	0/0:15,0:11:33.11:0,33,1092	0/0:8,0:8:24.07:0,24,716	0/0:7,0:7:18.06:0,18,589	0/0:7,0:7:18.06:0,18,544	0/0:7,0:7:21.07:0,21,652	0/0:2,0:2:6.02:0,6,198	1/1:0,4:4:12.04:181,12,0	0/0:17,0:17:51.16:0,51,1605	0/0:14,0:14:39.08:0,39,1133	0/0:11,0:11:33.11:0,33,1088
chr10	71674965	.	GA	G	310.02	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=3.519;DP=196;FS=7.846;HRun=6;HaplotypeScore=29.0135;InbreedingCoeff=0.7307;MQ=58.55;MQ0=5;MQRankSum=2.117;QD=16.32;ReadPosRankSum=0.518;VQSLOD=1.9496;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:3:9.03:0,9,118	0/0:3,0:3:9.03:0,9,118	./.	0/0:10,0:5:6.01:0,6,59	0/0:10,0:10:30.05:0,30,374	0/0:13,0:13:39.13:0,39,513	0/0:7,0:6:15.05:0,15,192	0/0:24,0:18:54.15:0,54,681	0/0:2,0:2:6.02:0,6,79	0/0:4,0:4:9.03:0,9,118	0/0:3,0:3:6.02:0,6,79	1/1:0,3:3:6.02:64,6,0	1/1:1,3:4:9.02:97,9,0	0/0:7,0:7:18.06:0,18,237	0/0:7,0:6:15.05:0,15,197	0/0:8,0:8:18.06:0,18,237	0/0:8,0:8:15.05:0,15,193	0/0:2,0:2:2.99:0,3,24	0/0:14,0:13:36.08:0,36,437	0/0:3,0:3:9.03:0,9,118	0/0:4,0:4:9.03:0,9,118	1/1:1,5:5:12.03:129,12,0	1/1:1,5:6:15.03:160,15,0	./.	0/0:5,0:4:15.05:0,15,197	0/0:13,0:13:39.13:0,39,513	0/0:8,0:8:24.08:0,24,315	0/0:15,0:15:42.14:0,42,552
chr10	71675169	.	GA	G	87.43	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.014;DP=466;FS=0.000;HRun=2;HaplotypeScore=56.1871;InbreedingCoeff=0.9280;MQ=73.41;MQ0=0;MQRankSum=-3.870;QD=6.24;ReadPosRankSum=1.531;VQSLOD=0.6746;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,9:14:10.09:172,10,0	0/0:5,0:5:15.05:0,15,220	0/0:17,0:14:36.11:0,36,494	0/0:10,0:10:25.63:0,26,351	0/0:22,0:22:66.22:0,66,985	0/0:19,0:19:57.18:0,57,836	0/0:12,0:12:36.12:0,36,538	0/0:29,0:29:87.29:0,87,1280	0/0:21,0:21:63.20:0,63,924	0/0:24,0:24:72.20:0,72,1054	0/0:9,0:9:21.07:0,21,304	0/0:11,0:11:33.11:0,33,495	0/0:16,0:16:48.16:0,48,720	0/0:14,0:14:42.14:0,42,630	0/0:15,0:15:45.15:0,45,673	0/0:18,0:18:54.18:0,54,810	0/0:23,0:22:63.17:0,63,919	0/0:16,0:16:39.09:0,39,559	0/0:18,0:18:54.18:0,54,809	0/0:12,0:12:36.09:0,36,499	0/0:22,0:22:57.18:0,57,830	0/0:11,0:11:33.10:0,33,474	0/0:10,0:10:24.05:0,24,331	0/0:18,0:18:54.18:0,54,809	0/0:17,0:17:45.12:0,45,634	0/0:25,0:25:75.20:0,75,1098	0/0:24,0:23:72.24:0,72,1074	0/0:13,0:13:36.12:0,36,539
chr10	71675172	.	TA	T	114.44	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.274;DP=475;FS=4.115;HRun=2;HaplotypeScore=57.1110;InbreedingCoeff=0.9235;MQ=73.22;MQ0=0;MQRankSum=-2.311;QD=8.80;ReadPosRankSum=1.467;VQSLOD=1.3382;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,9:13:12.78:201,13,0	0/0:4,0:4:12.04:0,12,167	0/0:14,0:12:32.87:0,33,413	0/0:11,1:11:20.36:0,20,329	0/0:23,0:23:58.69:0,59,815	0/0:21,0:21:63.19:0,63,844	0/0:12,0:12:36.08:0,36,450	0/0:30,0:30:90.23:0,90,1156	0/0:23,0:23:44.91:0,45,877	0/0:25,0:25:69.21:0,69,963	0/0:10,0:10:18.05:0,18,249	0/0:11,0:11:33.10:0,33,444	0/0:16,0:16:48.13:0,48,634	0/0:14,0:14:42.14:0,42,585	0/0:16,0:16:48.14:0,48,650	0/0:18,0:18:54.17:0,54,737	0/0:22,0:22:63.16:0,63,853	0/0:15,0:15:39.09:0,39,520	0/0:22,0:22:63.15:0,63,842	0/0:14,0:14:42.14:0,42,584	0/0:20,0:20:56.91:0,57,746	0/0:11,0:11:33.07:0,33,423	0/0:9,0:9:18.06:0,18,251	0/0:18,0:18:54.14:0,54,715	0/0:17,0:17:42.13:0,42,583	0/0:28,0:28:84.07:0,84,1072	0/0:24,0:23:72.22:0,72,981	0/0:13,0:13:36.10:0,36,483
chr10	71675305	.	CCTCTGAGGCT	C	694.96	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.166;DP=571;FS=2.689;HRun=0;HaplotypeScore=164.4348;InbreedingCoeff=0.9677;MQ=84.08;MQ0=0;MQRankSum=-5.290;QD=57.91;ReadPosRankSum=0.102;VQSLOD=3.5651;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:12:30.02:789,30,0	0/0:4,0:4:12.04:0,12,646	0/0:13,0:13:36.05:0,36,1248	0/0:23,0:23:63.17:0,63,2202	0/0:22,0:22:66.23:0,66,3424	0/0:27,0:27:78.27:0,78,4139	0/0:26,0:26:75.24:0,75,3766	0/0:29,0:29:84.29:0,84,3797	0/0:28,0:28:84.27:0,84,4269	0/0:29,0:29:81.28:0,81,4120	0/0:19,0:19:51.18:0,51,2693	0/0:19,0:19:54.19:0,54,2756	0/0:29,0:29:87.28:0,87,4410	0/0:31,0:31:93.32:0,93,4888	0/0:25,0:25:75.26:0,75,3866	0/0:28,0:28:84.29:0,84,4490	0/0:22,0:22:57.20:0,57,2958	0/0:11,0:11:30.10:0,30,1528	0/0:19,0:19:54.19:0,54,2872	0/0:9,0:9:27.09:0,27,1392	0/0:21,0:21:63.22:0,63,3104	0/0:19,0:19:51.08:0,51,2660	0/0:21,0:21:63.22:0,63,3313	0/0:18,0:18:51.17:0,51,2485	0/0:14,0:14:39.13:0,39,2079	0/0:22,0:22:66.23:0,66,3474	0/0:21,0:21:63.22:0,63,3281	0/0:10,0:10:30.10:0,30,1619
chr10	71675345	.	T	TCTGTCA	513.55	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.003;DP=571;FS=1.528;HRun=0;HaplotypeScore=119.2735;InbreedingCoeff=0.8417;MQ=80.99;MQ0=0;MQRankSum=-3.756;QD=51.36;ReadPosRankSum=0.200;VQSLOD=3.5363;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,4:10:18.06:604,18,0	0/0:2,0:2:3.01:0,3,67	0/0:16,0:16:42.14:0,42,889	0/0:14,0:14:36.09:0,36,739	0/0:30,0:30:78.25:0,78,1685	0/0:28,0:28:75.26:0,75,1658	0/0:22,0:22:63.22:0,63,1393	0/0:20,0:20:51.18:0,51,1142	0/0:28,0:28:78.27:0,78,1749	0/0:26,0:26:57.20:0,57,1280	0/0:25,0:25:72.25:0,72,1587	0/0:16,0:16:45.15:0,45,1011	0/0:24,0:24:60.21:0,60,1333	0/0:33,0:33:99:0,99,2179	0/0:26,0:26:75.25:0,75,1635	0/0:26,0:26:72.25:0,72,1597	0/0:25,0:25:57.20:0,57,1280	0/0:11,0:11:30.08:0,30,629	0/0:24,0:24:60.21:0,60,1347	0/0:22,0:22:63.22:0,63,1414	0/0:19,0:19:48.15:0,48,1011	0/0:18,0:18:44.99:0,45,1011	0/0:26,0:26:66.23:0,66,1483	0/0:19,0:19:57.20:0,57,1280	0/0:12,0:11:36.12:0,36,797	0/0:21,0:21:60.16:0,60,1204	0/0:19,0:19:51.17:0,51,1122	0/0:9,0:9:27.09:0,27,606
chr10	71675583	.	AAC	A	373.11	PASS	AB=0.902;AC=7;AF=0.125;AN=56;BaseQRankSum=7.667;DP=465;FS=16.489;HRun=0;HaplotypeScore=93.7972;InbreedingCoeff=0.1886;MQ=47.77;MQ0=22;MQRankSum=-7.068;QD=4.15;ReadPosRankSum=-2.970;VQSLOD=0.0612;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:3.01:0,3,57	0/1:4,0:3:2.81:3,0,6	0/0:11,0:4:8.99:0,9,119	0/0:11,0:7:21.07:0,21,388	0/0:26,0:23:63.22:0,63,1180	0/0:19,0:19:45.15:0,45,821	0/0:16,0:16:42.14:0,42,758	0/0:24,0:22:69.24:0,69,1292	0/0:11,0:11:30.10:0,30,569	0/1:20,3:19:16.78:156,0,17	0/1:17,4:17:11.69:145,0,12	0/0:19,0:19:54.18:0,54,967	0/0:28,0:26:69.22:0,69,1252	0/0:13,0:13:33.11:0,33,582	0/0:21,0:20:57.20:0,57,1080	0/0:15,0:14:36.12:0,36,646	0/1:19,1:17:34.64:53,0,35	1/1:7,0:5:6.82:21,7,0	0/0:20,0:17:47.88:0,48,788	0/0:15,0:15:42.14:0,42,796	0/0:16,0:14:27.01:0,27,440	0/0:19,0:16:35.73:0,36,639	0/0:9,0:9:21.05:0,21,285	0/0:25,0:25:51.17:0,51,926	0/1:12,3:14:31.55:118,0,32	0/0:24,0:24:66.11:0,66,1151	0/0:14,0:13:39.11:0,39,675	0/0:17,0:17:44.89:0,45,763
chr10	71675585	.	C	CCA	2268.66	PASS	AB=0.889;AC=10;AF=0.179;AN=56;BaseQRankSum=12.035;DP=471;FS=5.886;HRun=0;HaplotypeScore=93.0060;InbreedingCoeff=0.6518;MQ=47.73;MQ0=21;MQRankSum=-11.030;QD=24.13;ReadPosRankSum=-0.648;VQSLOD=3.9563;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:3.01:0,3,49	1/1:4,0:3:9.03:120,9,0	0/0:12,0:5:8.99:0,9,104	0/0:12,0:8:21.07:0,21,341	0/0:26,0:23:63.22:0,63,1023	0/0:20,0:20:44.89:0,45,695	0/0:17,0:17:42.14:0,42,684	0/0:25,0:23:72.24:0,72,1152	0/0:13,0:13:30.10:0,30,489	1/1:22,3:21:42.33:865,42,0	1/1:22,0:18:3.26:503,3,0	0/0:19,0:19:54.18:0,54,869	0/0:28,0:26:69.23:0,69,1116	0/0:12,0:12:33:0,33,500	0/0:21,0:20:57.19:0,57,929	0/0:16,0:15:36.05:0,36,555	1/1:19,2:18:35.85:476,36,0	0/1:5,2:5:16.02:150,0,16	0/0:18,0:15:45.12:0,45,706	0/0:14,0:14:42.14:0,42,685	0/0:13,0:12:24.04:0,24,362	0/0:19,0:16:36.08:0,36,556	0/0:9,0:9:21.01:0,21,288	0/0:25,0:25:51.10:0,51,776	0/1:15,0:14:30.08:311,0,30	0/0:24,0:24:66.17:0,66,1001	0/0:14,0:13:39.12:0,39,609	0/0:16,0:16:45.07:0,45,638
chr10	71675589	.	C	CCA	1763.34	PASS	AB=0.720;AC=7;AF=0.125;AN=56;BaseQRankSum=11.384;DP=458;FS=12.615;HRun=0;HaplotypeScore=93.0141;InbreedingCoeff=0.3127;MQ=50.93;MQ0=21;MQRankSum=-10.388;QD=20.75;ReadPosRankSum=1.638;VQSLOD=3.0567;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:3.01:0,3,49	1/1:1,3:3:9.03:126,9,0	0/0:17,0:6:11.88:0,12,153	0/0:19,0:12:23.82:0,24,330	0/0:25,0:23:63.22:0,63,1026	0/0:18,0:18:48.03:0,48,747	0/0:17,0:17:45.15:0,45,731	0/0:26,0:24:75.26:0,75,1208	0/0:13,0:13:36.12:0,36,585	0/1:14,9:20:63.86:518,0,64	0/1:8,10:17:0.70:474,0,1	0/0:19,0:19:54.08:0,54,798	0/0:27,0:26:72.21:0,72,1141	0/0:11,0:11:30.10:0,30,469	0/0:21,0:20:57.19:0,57,929	0/0:16,0:15:39.10:0,39,606	0/1:13,9:19:28.24:428,0,28	0/1:4,1:3:4.03:42,0,4	0/0:20,0:17:45.15:0,45,728	0/0:15,0:15:45.15:0,45,728	0/0:12,0:12:27.09:0,27,434	0/0:18,0:15:33.11:0,33,536	0/0:7,0:7:18.06:0,18,286	0/0:23,0:23:45.15:0,45,732	0/1:7,5:11:14.91:307,0,15	0/0:22,0:22:60.20:0,60,977	0/0:13,0:12:36.12:0,36,586	0/0:11,0:11:30.10:0,30,489
chr10	71675597	.	C	CA	1262.70	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=12.417;DP=449;FS=6.710;HRun=3;HaplotypeScore=89.6718;InbreedingCoeff=0.9417;MQ=58.86;MQ0=12;MQRankSum=-11.609;QD=15.98;ReadPosRankSum=2.192;VQSLOD=3.1367;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,1:3:8.90:67,9,0	0/0:26,0:12:4.70:0,5,80	0/0:20,0:12:26.81:0,27,282	0/0:24,0:24:66.19:0,66,805	0/0:17,0:17:34.15:0,34,510	0/0:16,0:16:42.13:0,42,520	0/0:29,0:27:81.25:0,81,993	0/0:15,0:15:39.12:0,39,477	1/1:13,7:19:49.46:377,49,0	1/1:11,7:16:39.36:330,39,0	0/0:17,0:17:50.64:0,51,600	0/0:23,0:23:66.21:0,66,812	0/0:10,0:10:27.08:0,27,330	0/0:19,0:19:57.18:0,57,706	0/0:16,0:15:42.03:0,42,499	1/1:13,7:19:46.52:368,47,0	1/1:2,3:5:14.83:166,15,0	0/0:20,0:18:48.14:0,48,582	0/0:17,0:17:48.15:0,48,587	0/0:10,0:10:30.09:0,30,371	0/0:16,0:14:33.10:0,33,408	0/0:6,0:6:12.04:0,12,148	0/0:20,0:20:48.15:0,48,591	1/1:7,3:10:10.50:134,11,0	0/0:22,0:22:60.18:0,60,732	0/0:13,0:12:36.11:0,36,446	0/0:12,0:12:33.10:0,33,409
chr10	71675598	.	AAC	A	1951.92	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=12.409;DP=443;FS=7.705;HRun=0;HaplotypeScore=92.3484;InbreedingCoeff=0.8682;MQ=59.34;MQ0=8;MQRankSum=-10.829;QD=19.33;ReadPosRankSum=2.003;VQSLOD=3.7303;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,1:3:8.93:71,9,0	0/1:26,0:13:28.54:29,0,161	0/0:20,0:12:24.70:0,25,390	0/0:24,0:24:66.23:0,66,1260	0/0:17,0:17:44.36:0,44,816	0/0:16,0:16:42.14:0,42,806	0/0:29,0:27:81.28:0,81,1559	0/0:15,0:15:42.14:0,42,772	1/1:11,9:18:54.16:711,54,0	1/1:11,6:16:39.93:492,40,0	0/0:17,0:17:51.17:0,51,946	0/0:23,0:23:66.23:0,66,1252	0/0:10,0:10:27.09:0,27,516	0/0:19,0:19:57.20:0,57,1096	0/0:16,0:15:42.14:0,42,782	1/1:14,6:19:37.01:520,37,0	1/1:4,0:4:10.24:56,10,0	0/0:20,0:18:51.16:0,51,926	0/0:17,0:17:48.16:0,48,895	0/0:12,0:12:36.12:0,36,648	0/0:14,0:14:32.79:0,33,627	0/0:5,0:5:12.04:0,12,229	0/0:20,0:20:48.16:0,48,920	1/1:7,2:9:15.86:256,16,0	0/0:22,0:22:60.20:0,60,1132	0/0:12,0:12:36.12:0,36,684	0/0:12,0:12:33.11:0,33,637
chr10	71675600	.	C	CA	732.90	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=10.789;DP=446;FS=9.406;HRun=2;HaplotypeScore=93.7000;InbreedingCoeff=0.8718;MQ=60.74;MQ0=7;MQRankSum=-9.483;QD=7.19;ReadPosRankSum=3.266;VQSLOD=0.4184;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,1:3:8.04:44,8,0	0/1:30,0:15:1.54:2,0,116	0/0:21,0:13:26.80:0,27,269	0/0:26,0:26:66.20:0,66,808	0/0:17,0:17:45.12:0,45,541	0/0:16,0:16:42.12:0,42,506	0/0:30,0:28:81.25:0,81,993	0/0:14,0:14:42.13:0,42,511	1/1:13,7:19:29.38:241,29,0	1/1:8,8:15:22.55:233,23,0	0/0:17,0:17:51.11:0,51,609	0/0:22,0:22:66.21:0,66,811	0/0:10,0:10:27.08:0,27,333	0/0:20,0:20:60.18:0,60,731	0/0:16,0:16:45.02:0,45,522	1/1:12,6:18:25.75:234,26,0	1/1:4,0:4:9.01:51,9,0	0/0:19,0:17:48.13:0,48,580	0/0:17,0:17:45.14:0,45,554	0/0:13,0:13:36.11:0,36,439	0/0:12,0:12:33.10:0,33,405	0/0:4,0:4:12.02:0,12,136	0/0:20,0:20:48.15:0,48,592	1/1:7,3:10:3.79:101,4,0	0/0:24,0:24:60.15:0,60,726	0/0:12,0:12:36.11:0,36,444	0/0:12,0:12:33.10:0,33,409
chr10	71675612	.	A	AC	1679.61	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=11.811;DP=457;FS=5.542;HRun=3;HaplotypeScore=95.2944;InbreedingCoeff=0.8544;MQ=73.33;MQ0=4;MQRankSum=-8.428;QD=15.13;ReadPosRankSum=0.213;VQSLOD=2.9112;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,1:3:9:87,9,0	0/1:42,0:27:5.03:5,0,228	0/0:26,0:18:5.47:0,5,187	0/0:25,0:25:55.92:0,56,586	0/0:21,0:21:50.07:0,50,544	0/0:14,0:14:39.06:0,39,420	0/0:25,0:24:72.14:0,72,796	0/0:15,0:15:24.43:0,24,481	1/1:5,17:21:57.13:666,57,0	1/1:4,10:14:36:398,36,0	0/0:19,0:19:53.85:0,54,581	0/0:21,0:21:57.17:0,57,677	0/0:10,0:10:26.74:0,27,284	0/0:17,0:17:48.15:0,48,571	0/0:16,0:16:45.09:0,45,510	1/1:8,9:17:32.82:369,33,0	0/0:4,0:4:7.29:0,7,39	0/0:20,0:20:48.13:0,48,555	0/0:17,0:17:48.12:0,48,542	0/0:12,0:12:30.08:0,30,348	0/0:9,0:9:24.07:0,24,286	0/0:6,0:6:17.97:0,18,172	0/0:19,0:19:45.13:0,45,527	1/1:4,7:12:32.81:325,33,0	0/0:24,0:24:57.13:0,57,695	0/0:14,0:14:39.08:0,39,440	0/0:11,0:11:33.10:0,33,393
chr10	71675796	.	TA	T	1265.86	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=5.324;DP=414;FS=0.576;HRun=8;HaplotypeScore=43.6919;InbreedingCoeff=0.9253;MQ=43.84;MQ0=38;MQRankSum=0.413;QD=15.25;ReadPosRankSum=3.253;VQSLOD=3.0787;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:48.10:0,48,546	1/1:0,7:5:15.02:145,15,0	./.	./.	0/0:38,0:36:74.93:0,75,886	0/0:14,0:14:30.07:0,30,341	0/0:7,0:7:9.03:0,9,104	0/0:24,1:23:60.14:0,60,708	0/0:10,0:10:24.07:0,24,289	1/1:1,19:18:45.07:435,45,0	1/1:1,16:16:30.04:290,30,0	0/0:11,0:11:21.06:0,21,254	0/0:19,0:19:32.81:0,33,374	0/0:9,0:9:18.04:0,18,206	0/0:12,0:12:27.07:0,27,311	0/0:13,0:13:33.10:0,33,394	1/1:4,10:11:18.02:174,18,0	1/1:3,9:12:21.03:201,21,0	0/0:15,0:15:45.14:0,45,542	0/0:20,0:20:57.16:0,57,669	0/0:8,0:8:12.04:0,12,145	0/0:8,0:7:9.03:0,9,109	0/0:13,0:13:27.08:0,27,326	0/0:6,0:4:3.01:0,3,36	1/1:2,11:11:21.03:202,21,0	0/0:28,0:28:75.20:0,75,883	0/0:20,0:19:36.11:0,36,435	0/0:15,0:10:27.06:0,27,312
chr10	71677216	.	ATGCTGGGTGATGGCTTTCCAGTGTGGCTC	A	489.98	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.275;DP=617;FS=6.697;HRun=0;HaplotypeScore=449.5430;InbreedingCoeff=0.9344;MQ=86.90;MQ0=0;MQRankSum=-0.946;QD=44.54;ReadPosRankSum=-0.791;VQSLOD=0.1397;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:9.03:573,9,0	0/0:12,0:12:33.11:0,33,3229	0/0:25,0:25:54.19:0,54,2637	0/0:28,0:28:70.10:0,70,3040	0/0:19,0:19:54.19:0,54,5156	0/0:23,0:23:63.17:0,63,7150	0/0:28,0:28:81.26:0,81,8838	0/0:37,0:37:99:0,105,8242	0/0:26,0:26:75.26:0,75,8218	0/0:26,0:26:78.27:0,78,7340	0/0:14,0:14:36.12:0,36,3007	0/0:24,0:24:69.24:0,69,8361	0/0:21,0:21:63.22:0,63,7267	0/0:27,0:27:78.27:0,78,8519	0/0:21,0:21:63.22:0,63,6800	0/0:28,0:28:84.29:0,84,9033	0/0:28,0:28:84.29:0,84,9834	0/0:11,0:11:33.11:0,33,3617	0/0:14,0:14:42.14:0,42,3838	0/0:18,0:18:48.16:0,48,5573	0/0:34,0:34:99:0,99,9218	0/0:27,0:27:78.27:0,78,9549	0/0:19,0:19:54.19:0,54,5419	0/0:21,0:21:63.22:0,63,7852	0/0:14,0:14:39.13:0,39,4365	0/0:26,0:26:72.25:0,72,8424	0/0:28,0:28:81.28:0,81,10462	0/0:7,0:7:21.07:0,21,2280
chr10	71677382	.	A	ACTTGAAGAGATCTT	18066.14	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=3.774;DP=596;FS=14.295;HRun=0;HaplotypeScore=228.8663;InbreedingCoeff=0.9946;MQ=92.63;MQ0=0;MQRankSum=-15.020;QD=150.55;ReadPosRankSum=-0.400;VQSLOD=3.7367;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,17:38:96.26:5508,96,0	1/1:2,5:8:21.07:1375,21,0	0/0:29,0:29:84.27:0,84,2859	0/0:27,0:27:78.05:0,78,2645	0/0:16,0:16:45.15:0,45,1982	0/0:22,0:22:66.21:0,66,2703	0/0:22,0:22:66.23:0,66,2598	0/0:30,0:30:90.31:0,90,3389	0/0:31,0:31:93.31:0,93,3841	1/1:10,10:21:60.18:3631,60,0	1/1:6,11:18:51.17:2866,51,0	0/0:23,0:23:69.24:0,69,2895	0/0:27,0:27:78.27:0,78,3140	0/0:10,0:10:30.09:0,30,1179	0/0:25,0:25:75.24:0,75,2902	0/0:28,0:28:84.27:0,84,3496	1/1:4,4:8:15.05:1080,15,0	1/1:5,4:10:18.06:1226,18,0	0/0:19,0:19:54.19:0,54,2101	0/0:26,0:26:75.25:0,75,3146	0/0:32,0:32:96.32:0,96,4132	0/0:18,0:18:48.16:0,48,2122	0/0:14,0:14:39.13:0,39,1561	0/0:26,0:26:75.24:0,75,3023	1/1:7,7:16:45.07:2379,45,0	0/0:22,0:22:66.20:0,66,2540	0/0:20,0:20:51.18:0,51,2144	0/0:9,0:9:27.09:0,27,1135
chr10	71677406	.	CT	C	1701.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.148;DP=647;FS=5.704;HRun=1;HaplotypeScore=103.8110;InbreedingCoeff=0.9932;MQ=89.02;MQ0=0;MQRankSum=-6.207;QD=33.37;ReadPosRankSum=1.065;VQSLOD=3.2015;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,51:51:99:1797,129,0	0/0:7,0:7:21.07:0,21,335	0/0:28,0:28:83.76:0,84,1263	0/0:25,0:25:74.61:0,75,1135	0/0:20,0:20:60.19:0,60,936	0/0:22,0:22:66.21:0,66,1028	0/0:22,0:22:66.21:0,66,1029	0/0:25,0:25:75.25:0,75,1179	0/0:25,0:25:75.25:0,75,1186	0/0:30,0:30:90.30:0,90,1417	0/0:19,0:18:57.19:0,57,907	0/0:22,0:22:66.23:0,66,1055	0/0:32,0:32:93.32:0,93,1486	0/0:18,0:18:54.18:0,54,863	0/0:21,0:21:63.20:0,63,984	0/0:26,0:26:78.27:0,78,1247	0/0:14,0:14:30.10:0,30,472	0/0:13,0:13:33.11:0,33,526	0/0:21,0:21:63.21:0,63,985	0/0:30,0:30:90.31:0,90,1438	0/0:39,0:39:99:0,117,1867	0/0:17,0:17:51.16:0,51,792	0/0:16,0:16:48.16:0,48,765	0/0:30,0:30:90.31:0,90,1439	0/0:20,0:20:57.19:0,57,909	0/0:23,0:23:69.23:0,69,1083	0/0:23,0:23:69.22:0,69,1072	0/0:8,0:8:24.05:0,24,337
chr10	71677602	.	A	AC	1245.36	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.843;DP=567;FS=10.531;HRun=3;HaplotypeScore=98.6692;InbreedingCoeff=0.9791;MQ=85.28;MQ0=0;MQRankSum=-1.667;QD=9.29;ReadPosRankSum=-1.667;VQSLOD=0.0101;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:33,1:34:61.31:384,61,0	1/1:10,0:10:7.66:40,8,0	0/0:17,0:17:51.13:0,51,621	0/0:22,0:22:47.71:0,48,587	0/0:19,0:19:57.19:0,57,740	0/0:21,0:21:60.19:0,60,779	0/0:16,0:16:48.15:0,48,611	0/0:24,0:24:72.22:0,72,911	0/0:31,0:31:90.29:0,90,1165	1/1:29,0:29:56.36:337,56,0	1/1:12,1:13:19.45:156,19,0	0/0:19,0:19:53.72:0,54,263	0/0:26,0:26:70.42:0,70,337	0/0:17,0:17:51.17:0,51,661	0/0:18,0:18:54.16:0,54,687	0/0:22,0:22:66.21:0,66,857	1/1:24,0:24:45.45:249,45,0	1/1:7,0:7:12.48:55,12,0	0/0:20,0:20:57.18:0,57,728	0/0:23,0:23:69.22:0,69,894	0/0:30,0:30:84.26:0,84,1075	0/0:20,0:20:56.84:0,57,292	0/0:14,0:14:33.84:0,34,191	0/0:18,0:18:45.01:0,45,215	1/1:15,2:17:28.55:220,29,0	0/0:24,0:24:69.21:0,69,882	0/0:23,0:23:69.17:0,69,861	0/0:9,0:9:24.08:0,24,312
chr10	71677847	.	ATGTGTGTGTGTG	A	1026.61	PASS	AB=0.763;AC=9;AF=0.161;AN=56;BaseQRankSum=3.116;DP=513;FS=9.924;HRun=0;HaplotypeScore=175.2649;InbreedingCoeff=0.4043;MQ=61.94;MQ0=11;MQRankSum=-3.371;QD=11.80;ReadPosRankSum=-0.333;VQSLOD=2.0591;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:33:29.98:0,30,321	0/0:3,0:8:9:0,9,90	0/0:25,0:10:3.01:0,3,40	0/0:35,0:21:6.02:0,6,81	0/0:7,0:8:18.01:0,18,475	0/0:21,0:23:30.06:0,30,926	0/0:20,0:22:39.08:0,39,1463	0/0:27,0:26:24:0,24,322	0/0:21,0:22:33.08:0,33,1362	0/0:11,0:14:16.22:0,16,110	0/0:10,0:11:3.73:0,4,36	0/1:8,5:15:7.43:340,0,7	1/1:8,0:8:8.97:214,9,0	0/0:12,0:12:21.05:0,21,934	0/0:20,0:23:42.06:0,42,1765	0/0:13,0:15:30.08:0,30,1312	0/1:27,0:28:1.46:1,0,148	0/0:13,0:13:15.48:0,15,533	0/0:24,0:21:23.54:0,24,633	0/0:10,0:10:15.04:0,15,351	0/0:30,0:30:36.07:0,36,954	1/1:8,2:8:3.01:103,3,0	1/1:3,5:8:4.16:303,4,0	0/1:8,10:17:24.17:195,0,24	0/0:8,0:12:3.01:0,3,35	0/0:20,0:21:33.09:0,33,948	0/0:23,0:25:51.07:0,51,2108	0/0:6,0:6:6.02:0,6,237
chr10	71677892	.	T	TGCGCGC	1075.77	PASS	AB=0.567;AC=10;AF=0.179;AN=56;BaseQRankSum=1.998;DP=525;FS=0.705;HRun=0;HaplotypeScore=127.4780;InbreedingCoeff=0.7085;MQ=59.19;MQ0=18;MQRankSum=-0.822;QD=11.57;ReadPosRankSum=2.259;VQSLOD=2.6032;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:59.55:0,60,1379	1/1:8,0:8:8.49:66,8,0	0/0:26,0:14:12.13:0,12,487	0/0:50,0:24:57.19:0,57,1187	0/0:10,0:10:18.06:0,18,379	0/0:14,0:12:27.06:0,27,483	0/0:30,0:30:84.29:0,84,1867	0/0:20,0:20:50.37:0,50,992	0/0:15,0:15:33.11:0,33,767	1/1:16,0:16:28.76:601,29,0	1/1:11,0:11:14.68:224,15,0	0/0:17,0:17:31.64:0,32,583	0/0:10,0:10:24.06:0,24,456	0/0:9,0:8:24.08:0,24,505	0/0:21,0:21:51.17:0,51,1106	0/0:18,0:18:45.15:0,45,1001	0/1:6,20:27:17.33:104,0,17	0/1:4,0:16:29.91:87,0,30	0/0:13,0:12:33.11:0,33,691	0/0:13,0:13:33.10:0,33,682	0/0:37,0:32:73.47:0,73,1470	0/0:8,0:7:12.03:0,12,214	0/0:12,0:12:18.95:0,19,369	0/0:29,0:29:51.17:0,51,1102	1/1:15,0:14:11.63:156,12,0	0/0:21,0:21:53.91:0,54,1057	0/0:19,0:18:54.19:0,54,1205	0/0:5,0:5:14.88:0,15,269
chr10	71678073	.	TA	T	1305.36	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.053;DP=462;FS=5.334;HRun=1;HaplotypeScore=52.4777;InbreedingCoeff=0.9638;MQ=65.06;MQ0=1;MQRankSum=-1.025;QD=31.08;ReadPosRankSum=2.812;VQSLOD=3.2341;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,40:42:98.90:1400,99,0	0/0:7,0:7:21.07:0,21,307	0/0:11,0:11:27.96:0,28,369	0/0:8,0:7:18.02:0,18,231	0/0:27,0:27:75.24:0,75,1076	0/0:16,0:16:48.05:0,48,636	0/0:9,0:9:27.03:0,27,347	0/0:29,0:29:87.27:0,87,1222	0/0:12,0:12:36.12:0,36,526	0/0:17,0:16:51.17:0,51,724	0/0:15,0:15:44.99:0,45,590	0/0:14,0:14:42.06:0,42,568	0/0:9,0:9:27.01:0,27,330	0/0:9,0:9:27.06:0,27,357	0/0:16,0:16:48.12:0,48,642	0/0:9,0:9:27.08:0,27,375	0/0:18,0:18:54.16:0,54,768	0/0:16,0:16:48.06:0,48,634	0/0:25,0:25:75.24:0,75,1064	0/0:37,0:37:99:0,108,1498	0/0:12,0:12:36.10:0,36,505	0/0:6,0:6:14.96:0,15,172	0/0:13,0:13:39.05:0,39,543	0/0:14,0:14:41.96:0,42,522	0/0:19,0:19:57.18:0,57,814	0/0:24,0:24:72.14:0,72,991	0/0:21,0:21:63.16:0,63,860	0/0:7,0:7:21.05:0,21,285
chr10	71678761	.	TG	T	1487.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.959;DP=647;FS=2.700;HRun=4;HaplotypeScore=113.2554;InbreedingCoeff=0.9597;MQ=92.13;MQ0=0;MQRankSum=-3.862;QD=31.66;ReadPosRankSum=1.892;VQSLOD=3.2616;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,47:47:99:1583,132,0	0/0:4,0:4:12.04:0,12,168	0/0:31,0:31:84.26:0,84,1150	0/0:26,0:26:59.75:0,60,931	0/0:28,0:28:78.23:0,78,1052	0/0:29,0:29:78.26:0,78,1092	0/0:23,0:23:66.22:0,66,924	0/0:33,0:33:96.29:0,96,1287	0/0:15,0:15:45.13:0,45,612	0/0:10,0:10:24.07:0,24,320	0/0:18,0:18:54.13:0,54,717	0/0:21,0:21:63.20:0,63,864	0/0:21,0:21:60.20:0,60,839	0/0:17,0:17:51.17:0,51,714	0/0:33,0:33:99:0,99,1386	0/0:19,0:19:57.19:0,57,798	0/0:29,0:29:84.28:0,84,1175	0/0:12,0:12:33.11:0,33,461	0/0:20,0:20:57.14:0,57,732	0/0:28,0:28:84.28:0,84,1175	0/0:38,0:38:99:0,114,1594	0/0:16,0:16:45.15:0,45,630	0/0:26,0:26:78.23:0,78,1056	0/0:28,0:28:81.25:0,81,1103	0/0:7,0:7:18.06:0,18,252	0/0:30,0:30:90.30:0,90,1260	0/0:29,0:29:75.25:0,75,1050	0/0:9,0:9:27.09:0,27,378
chr10	71678816	.	C	CT	5289.39	PASS	AB=0.899;AC=54;AF=0.964;AN=56;BaseQRankSum=1.963;DP=695;FS=3.349;HRun=4;HaplotypeScore=184.5616;InbreedingCoeff=-0.0291;MQ=93.06;MQ0=0;MQRankSum=-1.305;QD=7.61;ReadPosRankSum=5.799;VQSLOD=1.3124;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:58,0:57:52.07:297,52,0	1/1:6,0:6:11.05:45,11,0	0/1:34,4:38:51:51,0,423	0/1:22,3:25:18.88:19,0,298	1/1:25,0:25:43.27:154,43,0	1/1:29,0:29:67.86:247,68,0	1/1:24,0:24:60.90:271,61,0	1/1:29,0:29:73.73:398,74,0	1/1:28,0:28:65.31:239,65,0	1/1:21,0:21:35.39:188,35,0	1/1:10,0:10:19.74:88,20,0	1/1:21,0:21:34.19:156,34,0	1/1:26,0:26:44.78:211,45,0	1/1:19,0:19:14.29:127,14,0	1/1:36,0:36:88.86:346,89,0	1/1:20,0:20:51.81:201,52,0	1/1:22,0:22:21.03:97,21,0	1/1:11,0:11:18.26:74,18,0	1/1:24,0:24:52.61:269,53,0	1/1:24,0:24:49.98:195,50,0	1/1:32,0:32:61.62:245,62,0	1/1:26,0:26:30.49:130,30,0	1/1:29,0:29:18.19:191,18,0	1/1:31,0:31:54.29:241,54,0	1/1:10,0:10:20.90:87,21,0	1/1:28,0:28:64.76:348,65,0	1/1:37,0:37:81.57:323,82,0	1/1:6,0:6:14.38:50,14,0
chr10	71679156	.	C	CCGTG	1617.72	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.133;DP=611;FS=2.673;HRun=0;HaplotypeScore=116.2962;InbreedingCoeff=0.9814;MQ=98.26;MQ0=0;MQRankSum=-7.107;QD=64.71;ReadPosRankSum=-1.364;VQSLOD=5.2735;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:69.24:1713,69,0	0/0:9,0:9:24.08:0,24,478	0/0:34,0:34:88.22:0,88,1699	0/0:29,0:29:68.33:0,68,1283	0/0:25,0:25:75.22:0,75,1382	0/0:17,0:17:48.16:0,48,959	0/0:26,0:26:78.27:0,78,1537	0/0:30,0:30:87.29:0,87,1697	0/0:30,0:30:84.29:0,84,1678	0/0:19,0:19:54.17:0,54,1044	0/0:18,0:18:48.15:0,48,913	0/0:30,0:30:90.28:0,90,1709	0/0:18,0:18:54.19:0,54,1066	0/0:20,0:20:57.20:0,57,1138	0/0:30,0:30:87.30:0,87,1737	0/0:25,0:25:75.24:0,75,1433	0/0:23,0:23:66.20:0,66,1264	0/0:12,0:12:36.12:0,36,719	0/0:21,0:21:63.21:0,63,1225	0/0:21,0:21:63.20:0,63,1212	0/0:30,0:30:90.31:0,90,1782	0/0:17,0:17:48.16:0,48,955	0/0:20,0:20:60.16:0,60,1080	0/0:23,0:23:69.24:0,69,1378	0/0:10,0:10:27.09:0,27,523	0/0:20,0:20:60.19:0,60,1132	0/0:24,0:24:69.24:0,69,1378	0/0:5,0:5:15.05:0,15,299
chr10	71679312	.	T	TG	554.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.364;DP=644;FS=4.392;HRun=7;HaplotypeScore=69.1065;InbreedingCoeff=0.9992;MQ=87.99;MQ0=0;MQRankSum=-5.682;QD=19.12;ReadPosRankSum=-1.662;VQSLOD=3.0721;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:54.17:649,54,0	0/0:11,0:12:32.08:0,32,296	0/0:30,0:30:65.23:0,65,624	0/0:26,0:26:42.86:0,43,381	0/0:30,0:30:84.09:0,84,794	0/0:13,0:13:36.05:0,36,347	0/0:26,0:26:72.08:0,72,684	0/0:36,0:36:93.10:0,93,879	0/0:33,0:33:90.10:0,90,851	0/0:26,0:26:69.07:0,69,649	0/0:23,0:23:57.06:0,57,542	0/0:20,0:20:51.03:0,51,479	0/0:24,0:24:63.07:0,63,596	0/0:22,0:22:63.10:0,63,608	0/0:25,0:25:66.10:0,66,637	0/0:22,0:22:63.08:0,63,597	0/0:25,0:25:63.09:0,63,608	0/0:14,0:14:38.87:0,39,344	0/0:21,0:21:45:0,45,421	0/0:27,0:27:72.11:0,72,692	0/0:15,0:15:42.03:0,42,393	0/0:26,0:26:72.11:0,72,691	0/0:14,0:14:39.02:0,39,364	0/0:18,0:18:39.04:0,39,371	0/0:14,0:14:42.07:0,42,405	0/0:20,0:20:60.09:0,60,575	0/0:38,0:38:99:0,99,943	0/0:15,0:15:45.07:0,45,434
chr10	71680183	.	GGT	G	5070.11	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.668;DP=538;FS=4.668;HRun=0;HaplotypeScore=87.8015;InbreedingCoeff=0.9971;MQ=90.61;MQ0=0;MQRankSum=-4.542;QD=39.92;ReadPosRankSum=0.723;VQSLOD=6.7951;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:36:99:1434,99,0	1/1:1,8:9:21.07:309,21,0	0/0:16,0:16:45.13:0,45,787	0/0:28,0:28:81.23:0,81,1373	0/0:17,0:17:48.16:0,48,891	0/0:11,0:11:33.11:0,33,618	0/0:22,0:22:66.23:0,66,1236	0/0:19,0:19:57.20:0,57,1046	0/0:22,0:22:57.19:0,57,1056	1/1:1,20:21:60.19:862,60,0	1/1:2,8:10:24.08:345,24,0	0/0:14,0:14:39.13:0,39,729	0/0:18,0:18:54.12:0,54,919	0/0:17,0:17:51.17:0,51,955	0/0:18,0:18:51.16:0,51,916	0/0:23,0:23:63.22:0,63,1169	1/1:1,25:26:72.24:1060,72,0	1/1:0,16:16:45.15:663,45,0	0/0:19,0:19:54.19:0,54,1010	0/0:22,0:22:66.23:0,66,1217	0/0:43,0:43:99:0,126,2299	0/0:8,0:8:18.04:0,18,304	0/0:20,0:20:60.19:0,60,1073	0/0:13,0:13:39.09:0,39,682	1/1:0,9:9:27.09:397,27,0	0/0:24,0:24:72.23:0,72,1317	0/0:25,0:25:75.23:0,75,1323	0/0:12,0:12:36.12:0,36,674
chr10	71680469	.	AGT	A	213.69	PASS	AB=0.958;AC=17;AF=0.315;AN=54;BaseQRankSum=4.508;DP=712;FS=0.000;HRun=0;HaplotypeScore=168.4650;InbreedingCoeff=-0.0982;MQ=61.23;MQ0=23;MQRankSum=-1.506;QD=0.56;ReadPosRankSum=1.392;VQSLOD=2.6992;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:47,0:46:96.81:97,0,152	1/1:11,0:11:3.55:15,4,0	./.	0/0:40,0:17:5.83:0,6,37	0/0:18,0:17:14.93:0,15,173	0/1:17,0:18:13.19:13,0,215	0/0:13,3:15:6.01:0,6,84	0/1:26,0:21:14.53:15,0,110	0/1:27,2:28:31.47:31,0,382	0/1:44,0:43:22.29:37,0,22	0/0:21,0:20:0.14:0,0,1	0/0:20,0:20:14.70:0,15,182	0/0:15,0:13:17.78:0,18,214	0/0:24,0:24:2.29:0,2,405	0/0:16,0:16:9.02:0,9,113	0/0:18,0:18:21.24:0,21,402	1/1:18,0:18:0.47:1,0,0	1/1:4,0:4:2.99:24,3,0	0/1:21,0:19:9.65:10,0,142	0/1:22,0:22:8.35:8,0,276	0/1:51,17:67:3.69:4,0,695	0/1:28,1:27:29.76:30,0,39	0/0:29,0:28:21.81:0,22,203	0/0:20,0:20:18.20:0,18,236	0/0:25,0:24:0.89:0,1,2	0/1:30,2:30:55.91:56,0,425	0/1:10,0:10:14.56:15,0,163	0/0:22,0:22:25.84:0,26,330
chr10	71680498	.	GTGTGTA	G	1450.57	PASS	AB=0.937;AC=15;AF=0.268;AN=56;BaseQRankSum=6.180;DP=754;FS=5.223;HRun=0;HaplotypeScore=257.0395;InbreedingCoeff=0.3164;MQ=43.01;MQ0=31;MQRankSum=-4.029;QD=4.84;ReadPosRankSum=-2.697;VQSLOD=1.8290;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:55,0:54:80.19:80,0,271	1/1:5,2:7:9.02:163,9,0	0/1:24,0:8:5.34:5,0,71	0/1:38,0:10:2.83:3,0,32	0/0:32,0:31:24.31:0,24,544	0/1:19,0:19:7.82:8,0,533	0/0:14,0:13:5.97:0,6,152	0/0:33,0:27:43.73:0,44,574	0/0:32,0:31:59.68:0,60,916	0/1:58,6:62:41.92:1053,0,42	1/1:8,12:19:8.86:79,9,0	0/0:16,0:16:4.91:0,5,425	0/0:17,0:14:13.32:0,13,290	0/0:23,0:23:27.11:0,27,1040	0/0:24,0:24:25.15:0,25,389	0/0:18,0:18:37.49:0,37,715	1/1:6,12:18:14.77:118,15,0	1/1:4,0:4:5.98:46,6,0	0/0:15,0:12:25.48:0,25,498	0/0:29,0:29:48.37:0,48,681	0/0:73,0:67:53.03:0,53,1665	0/0:34,0:32:17.21:0,17,214	0/1:30,0:29:12.15:12,0,268	0/0:23,0:23:23.69:0,24,471	0/1:11,7:18:18.73:47,0,19	0/0:42,0:39:47.36:0,47,956	0/0:10,0:9:8.75:0,9,431	0/0:16,0:17:34.87:0,35,684
chr10	71680500	.	GTGTA	G	1335.09	PASS	AB=0.998;AC=16;AF=0.286;AN=56;BaseQRankSum=7.603;DP=759;FS=4.760;HRun=0;HaplotypeScore=245.0867;InbreedingCoeff=0.3964;MQ=43.06;MQ0=28;MQRankSum=-3.481;QD=3.76;ReadPosRankSum=-2.651;VQSLOD=1.5368;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:54,0:53:99:145,0,109	1/1:7,0:7:8.97:93,9,0	0/1:25,0:8:7.45:7,0,70	0/1:37,0:11:6.66:7,0,30	0/0:33,0:31:23.42:0,23,456	0/0:21,0:20:2.07:0,2,459	0/0:16,0:15:8.92:0,9,147	0/0:35,0:29:39.20:0,39,523	0/0:30,0:29:59.63:0,60,731	1/1:67,0:64:37.87:898,38,0	1/1:19,0:19:8.89:65,9,0	0/0:16,0:16:5.38:0,5,278	0/0:16,0:13:14.33:0,14,219	0/0:22,0:22:25.39:0,25,807	0/0:24,0:25:26.93:0,27,321	0/0:19,0:19:35.29:0,35,583	1/1:17,2:19:17.71:115,18,0	1/1:4,1:5:8.94:66,9,0	0/0:15,0:12:26.36:0,26,421	0/0:31,0:31:31.01:0,31,563	0/1:73,1:68:67.20:67,0,1317	0/0:34,0:32:10.34:0,10,135	0/1:30,0:29:20.54:21,0,213	0/0:24,0:23:23.55:0,24,327	0/1:18,0:17:17.20:27,0,17	0/0:42,0:39:39.91:0,40,743	0/0:10,0:9:8.75:0,9,342	0/0:15,0:15:27.65:0,28,533
chr10	71680504	.	A	ATG	741.28	PASS	AB=0.801;AC=11;AF=0.196;AN=56;BaseQRankSum=3.444;DP=757;FS=24.039;HRun=0;HaplotypeScore=242.4633;InbreedingCoeff=0.5979;MQ=43.38;MQ0=27;MQRankSum=-0.615;QD=4.72;ReadPosRankSum=1.109;VQSLOD=1.3821;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:46:25.38:0,25,125	0/0:7,0:7:1.84:0,2,12	0/0:29,0:12:31.94:0,32,322	0/0:32,0:9:20.58:0,21,178	0/0:34,0:32:23.86:0,24,279	0/0:21,0:20:32.99:0,33,371	0/0:18,0:17:11.88:0,12,96	0/0:36,0:30:64.82:0,65,670	0/0:29,0:28:49.38:0,49,528	0/0:68,0:65:27.59:0,28,133	0/0:21,0:21:0.26:0,0,0	1/1:12,3:14:23.63:284,24,0	1/1:6,10:13:9.52:147,10,0	0/0:21,0:21:36.10:0,36,426	0/0:25,0:25:24.36:0,24,290	0/0:19,0:21:27.67:0,28,301	1/1:20,0:20:2.40:20,2,0	0/0:4,0:4:0.47:0,0,1	0/0:17,0:13:27.97:0,28,326	0/0:29,0:29:23.53:0,24,358	0/0:74,0:69:93.26:0,93,1038	0/1:23,12:33:20.47:90,0,20	1/1:26,3:28:16.16:244,16,0	0/1:10,12:22:33.21:107,0,33	0/1:19,0:19:0.60:1,0,1	0/0:39,0:38:51.24:0,51,602	0/0:11,0:10:16.56:0,17,184	0/0:16,0:16:21.12:0,21,225
chr10	71680527	.	TATG	T	1887.61	PASS	AB=0.849;AC=11;AF=0.196;AN=56;BaseQRankSum=12.740;DP=763;FS=86.952;HRun=0;HaplotypeScore=264.7926;InbreedingCoeff=-0.2498;MQ=60.00;MQ0=14;MQRankSum=-10.259;QD=7.32;ReadPosRankSum=5.010;VQSLOD=-0.1936;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:41.36:0,41,951	0/1:7,0:7:31.47:31,0,225	0/0:55,0:37:99:0,111,2556	0/0:63,0:39:83.17:0,83,2580	0/0:22,12:32:42.69:0,43,1032	0/0:16,0:16:32.85:0,33,746	0/1:16,1:17:3.81:4,0,964	0/0:41,1:38:59.58:0,60,2456	0/0:26,2:28:13.70:0,14,1340	0/1:56,12:66:99:940,0,1882	0/1:13,3:16:71.70:72,0,272	0/0:17,0:16:42.14:0,42,1016	0/1:14,1:13:32.89:33,0,276	0/0:17,1:18:45.14:0,45,1010	0/0:16,3:20:43.03:0,43,1007	0/0:18,1:19:23.86:0,24,804	0/0:18,1:19:30.03:0,30,685	0/0:4,0:3:9.03:0,9,221	0/0:21,0:18:47.79:0,48,1055	0/1:16,12:28:99:225,0,682	0/0:56,0:54:99:0,120,2730	0/1:19,17:36:99:252,0,333	0/0:24,8:31:3.20:0,3,709	0/0:18,1:19:20.70:0,21,456	0/1:12,4:16:99:112,0,128	0/1:26,5:31:99:218,0,1258	0/1:10,3:12:99:112,0,626	0/1:10,1:11:32.88:33,0,306
chr10	71680570	.	G	GGT	1882.74	PASS	AB=0.865;AC=11;AF=0.196;AN=56;BaseQRankSum=2.502;DP=638;FS=4.480;HRun=0;HaplotypeScore=227.6430;InbreedingCoeff=0.5153;MQ=51.29;MQ0=4;MQRankSum=-3.161;QD=11.69;ReadPosRankSum=0.169;VQSLOD=3.1672;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:9.03:0,9,117	0/0:7,0:7:1.20:0,1,15	0/0:33,0:21:29.86:0,30,457	0/0:39,0:31:42.27:0,42,531	0/0:37,0:37:22.83:0,23,296	0/0:15,0:15:1.57:0,2,218	0/0:23,0:23:26.65:0,27,276	0/1:38,0:38:30.83:31,0,617	0/0:30,0:30:37.32:0,37,422	0/1:28,22:51:99:1104,0,115	1/1:9,5:15:11.53:161,12,0	0/0:12,0:12:23.90:0,24,297	0/0:8,0:8:6.02:0,6,73	0/0:16,0:16:17.74:0,18,178	0/0:21,0:21:32.88:0,33,317	0/0:18,0:18:23.55:0,24,258	1/1:1,9:10:27.09:431,27,0	1/1:0,3:3:9.03:153,9,0	0/0:19,0:19:33.08:0,33,410	0/0:30,0:30:16.04:0,16,254	0/0:38,0:37:65.96:0,66,839	0/1:25,0:27:6.48:6,0,95	0/0:28,0:32:7.33:0,7,199	0/0:14,0:15:8.99:0,9,98	1/1:12,3:16:11.93:156,12,0	0/0:40,1:41:22.77:0,23,969	0/0:10,0:10:15.96:0,16,220	0/0:4,0:4:11.95:0,12,134
chr10	71680579	.	G	GT	370.84	PASS	AB=0.917;AC=11;AF=0.196;AN=56;BaseQRankSum=5.784;DP=568;FS=0.587;HRun=1;HaplotypeScore=190.4827;InbreedingCoeff=0.3924;MQ=47.38;MQ0=4;MQRankSum=-1.849;QD=2.65;ReadPosRankSum=1.526;VQSLOD=-0.3977;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:15:0,15,187	0/1:3,1:5:6.14:6,0,20	0/0:26,0:15:40.02:0,40,537	0/0:28,0:20:50.83:0,51,667	0/0:36,1:37:24.06:0,24,371	0/1:11,1:12:21.15:21,0,252	0/0:22,1:23:38.91:0,39,436	0/0:28,4:31:8.18:0,8,783	0/0:27,0:28:18.81:0,19,525	0/1:39,2:41:99:219,0,209	1/1:11,1:13:8.04:62,8,0	0/0:13,0:13:24.37:0,24,319	0/0:6,0:6:6.02:0,6,83	0/0:13,0:13:20.97:0,21,262	0/0:15,0:16:36.03:0,36,408	0/0:15,0:15:22.66:0,23,282	1/1:9,1:10:13.22:96,13,0	1/1:3,0:3:6.11:18,6,0	0/0:20,0:20:36.12:0,36,496	0/0:24,2:27:14.49:0,14,284	0/0:33,0:34:66.10:0,66,901	0/0:26,1:26:15.36:0,15,144	0/0:31,0:31:21.89:0,22,264	0/0:15,0:15:8.84:0,9,125	0/1:14,0:17:3.50:42,0,3	0/1:36,1:38:58.26:58,0,1082	0/0:10,0:10:24.06:0,24,299	0/0:4,0:4:12.03:0,12,151
chr10	71680580	.	GTA	G	343.17	PASS	AB=0.921;AC=11;AF=0.196;AN=56;BaseQRankSum=8.188;DP=552;FS=35.993;HRun=0;HaplotypeScore=181.0815;InbreedingCoeff=-0.1166;MQ=46.14;MQ0=4;MQRankSum=-6.306;QD=1.87;ReadPosRankSum=1.893;VQSLOD=1.4484;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:11.73:0,12,214	1/1:5,0:5:2.89:20,3,0	0/0:27,0:15:38.86:0,39,551	0/0:26,1:19:19.31:0,19,488	0/0:35,1:36:27.56:0,28,477	0/0:11,0:11:20.74:0,21,299	0/0:23,0:23:35.95:0,36,604	0/1:29,2:30:10.92:11,0,903	0/1:25,2:27:32.30:32,0,513	0/1:35,3:39:99:203,0,890	0/0:11,1:12:3.43:0,3,40	0/0:11,1:12:21.54:0,22,342	0/0:5,0:5:6.02:0,6,107	0/1:13,0:13:40.53:41,0,249	0/1:14,0:14:38.58:39,0,341	0/1:13,2:15:19.08:19,0,307	0/0:10,0:10:20.74:0,21,361	0/0:3,0:3:9.03:0,9,149	0/0:20,0:20:36.08:0,36,577	0/0:25,2:27:13.78:0,14,330	0/0:33,0:32:56.55:0,57,988	0/1:26,0:25:48.64:49,0,99	0/0:26,5:31:18.48:0,18,289	0/0:15,0:15:8.57:0,9,150	0/0:11,6:17:5.34:0,5,72	0/0:37,1:37:47.29:0,47,1418	0/1:8,2:10:64.08:64,0,245	0/1:3,1:4:7.93:8,0,153
chr10	71680583	.	T	TG	88.03	PASS	AB=0.859;AC=7;AF=0.125;AN=56;BaseQRankSum=6.782;DP=515;FS=33.631;HRun=0;HaplotypeScore=157.7876;InbreedingCoeff=0.0290;MQ=46.01;MQ0=4;MQRankSum=-6.094;QD=0.97;ReadPosRankSum=1.009;VQSLOD=0.7237;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:11.38:0,11,166	1/1:2,3:5:2.97:20,3,0	0/0:27,0:15:39.08:0,39,474	0/0:23,0:15:38.28:0,38,433	0/0:27,5:32:25.24:0,25,372	0/0:10,0:10:21.47:0,21,253	0/0:21,1:22:35.86:0,36,492	0/0:30,0:29:9.71:0,10,686	0/0:23,2:25:21.15:0,21,436	0/1:27,5:32:99:128,0,756	0/0:10,2:12:2.68:0,3,40	0/0:12,0:12:21.54:0,22,285	0/0:6,0:6:6.02:0,6,84	0/1:10,3:13:16.36:16,0,188	0/1:11,2:13:13.56:14,0,265	0/0:12,1:13:21.61:0,22,261	0/0:10,0:10:21:0,21,293	0/0:3,0:3:9.03:0,9,126	0/0:17,1:18:36.11:0,36,484	0/0:18,4:22:19.92:0,20,250	0/0:33,0:32:56.72:0,57,775	0/1:15,8:23:23.01:23,0,74	0/0:29,1:31:14.54:0,15,229	0/0:15,0:15:9.03:0,9,125	0/0:14,1:15:5.46:0,5,66	0/0:35,1:35:84.94:0,85,1131	0/0:8,0:8:4.95:0,5,200	0/1:4,0:4:7.93:8,0,114
chr10	71680595	.	G	GTA	58.84	PASS	AB=0.954;AC=7;AF=0.125;AN=56;BaseQRankSum=6.222;DP=398;FS=20.811;HRun=0;HaplotypeScore=135.6419;InbreedingCoeff=0.0574;MQ=39.17;MQ0=3;MQRankSum=-3.451;QD=0.61;ReadPosRankSum=-0.519;VQSLOD=1.2351;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:8.90:0,9,60	0/0:4,1:5:2.22:0,2,7	0/0:12,0:3:6.02:0,6,91	0/0:9,0:5:5.99:0,6,89	0/0:26,0:26:5.38:0,5,81	0/0:9,0:9:11.87:0,12,104	0/1:19,0:19:0.43:0,0,128	0/0:20,0:19:1.24:0,1,181	0/0:21,0:21:7.59:0,8,141	0/1:27,1:28:92.71:93,0,571	0/1:7,1:8:0.08:0,0,0	0/0:10,0:10:2.45:0,2,27	0/0:4,0:4:6.02:0,6,83	0/0:12,0:12:0.27:0,0,74	0/1:10,0:10:2.54:3,0,73	0/0:11,0:11:10.25:0,10,165	0/0:9,0:9:20.25:0,20,245	0/0:2,0:2:5.99:0,6,66	0/0:12,0:12:21.07:0,21,320	0/0:19,0:19:13.85:0,14,166	0/0:19,0:18:21.04:0,21,315	0/1:20,2:21:12.10:12,0,77	0/0:27,2:29:11.81:0,12,118	1/1:8,1:9:3.01:49,3,0	0/0:13,0:13:2.15:0,2,38	0/0:29,1:29:54.63:0,55,941	0/0:8,0:8:4.38:0,4,95	0/0:5,0:5:8.94:0,9,72
chr10	71705899	.	TA	T	1673.26	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=4.152;DP=300;FS=2.832;HRun=10;HaplotypeScore=29.0948;InbreedingCoeff=0.8341;MQ=56.09;MQ0=36;MQRankSum=0.852;QD=17.43;ReadPosRankSum=0.099;VQSLOD=3.1901;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:16:44.99:391,45,0	1/1:0,8:8:23.99:207,24,0	0/0:5,0:5:2.07:0,2,63	0/0:5,0:3:5.60:0,6,28	0/0:22,0:19:54.15:0,54,597	0/0:11,0:11:30.08:0,30,331	0/0:4,0:4:9.02:0,9,100	0/0:3,0:22:55.10:0,55,289	0/0:6,0:5:15:0,15,152	1/1:2,19:20:56.95:486,57,0	1/1:3,7:9:17.98:156,18,0	0/0:7,0:4:9.02:0,9,100	0/0:7,0:7:21.05:0,21,229	0/0:9,0:8:24.02:0,24,252	0/0:1,0:1:3.01:0,3,33	0/0:7,0:6:18.05:0,18,199	1/1:5,11:12:29.98:260,30,0	1/1:1,9:9:18:156,18,0	0/0:12,1:11:7.01:0,7,295	0/0:18,0:12:36.07:0,36,386	0/0:4,0:2:6.02:0,6,66	0/0:4,0:2:6.02:0,6,66	0/0:8,0:6:18.05:0,18,198	0/0:12,0:8:18.04:0,18,194	1/1:3,9:11:23.99:207,24,0	0/0:13,0:12:30.08:0,30,332	0/0:17,0:17:51.14:0,51,562	0/0:8,0:6:15.04:0,15,166
chr10	71707785	.	T	TAA	2246.12	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.785;DP=545;FS=2.057;HRun=10;HaplotypeScore=96.3669;InbreedingCoeff=0.9586;MQ=65.19;MQ0=2;MQRankSum=-7.656;QD=22.02;ReadPosRankSum=-0.599;VQSLOD=3.1224;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:70.54:0,71,776	1/1:6,3:11:25.57:249,26,0	0/0:20,0:12:5.64:0,6,90	0/0:19,0:11:9.26:0,9,92	0/0:20,0:22:30.82:0,31,502	0/0:15,0:15:35.97:0,36,353	0/0:13,0:14:38.12:0,38,372	0/0:22,0:23:56.84:0,57,555	0/0:18,0:18:38.99:0,39,396	1/1:15,5:21:47.08:566,47,0	1/1:25,0:24:53.82:544,54,0	0/0:16,0:16:38.93:0,39,389	0/0:19,0:19:51.07:0,51,504	0/0:13,0:15:38.81:0,39,371	0/0:17,0:17:36.02:0,36,366	0/0:12,0:12:36.07:0,36,360	1/1:7,3:10:20.31:203,20,0	1/1:10,4:14:36.05:420,36,0	0/0:12,0:14:32.44:0,32,289	0/0:25,0:26:59.80:0,60,577	0/0:22,0:22:51.02:0,51,505	0/0:22,0:22:56.63:0,57,578	0/0:31,0:31:77.96:0,78,786	0/0:20,0:20:54.06:0,54,549	1/1:17,3:20:42.51:452,43,0	0/0:28,1:30:33.27:0,33,611	0/0:31,0:30:83.11:0,83,793	0/0:4,0:6:11.74:0,12,102
chr10	71707792	.	AAAAC	A	3911.64	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.094;DP=547;FS=0.000;HRun=0;HaplotypeScore=110.0932;InbreedingCoeff=0.9866;MQ=61.99;MQ0=2;MQRankSum=-6.576;QD=35.89;ReadPosRankSum=-2.587;VQSLOD=3.0735;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:89.66:0,90,1812	1/1:5,5:10:30.06:421,30,0	0/0:20,0:12:22.82:0,23,237	0/0:22,0:12:10.67:0,11,216	0/0:21,0:20:62.93:0,63,1165	0/0:14,0:14:39.03:0,39,763	0/0:14,0:14:41.59:0,42,611	0/0:23,0:23:65.92:0,66,1078	0/0:19,0:19:54.16:0,54,1130	1/1:17,7:24:65.86:815,66,0	1/1:7,20:26:68.79:920,69,0	0/0:15,0:15:45.12:0,45,894	0/0:17,0:17:51.14:0,51,984	0/0:15,0:15:41.87:0,42,847	0/0:16,0:16:45.14:0,45,981	0/0:13,0:13:39.09:0,39,719	1/1:8,4:11:21.54:326,22,0	1/1:5,7:12:36.12:573,36,0	0/0:18,0:18:29.95:0,30,571	0/0:22,0:22:66.04:0,66,1213	0/0:21,0:21:52.88:0,53,931	0/0:21,0:21:56.59:0,57,1236	0/0:29,0:29:78.10:0,78,1520	0/0:20,0:20:60.17:0,60,1150	1/1:13,11:24:63.09:858,63,0	0/0:31,0:31:32.27:0,32,1555	0/0:29,0:28:86.21:0,86,1528	0/0:7,0:7:14.73:0,15,167
chr10	71707795	.	AC	A	1248.35	PASS	AB=0.920;AC=13;AF=0.232;AN=56;BaseQRankSum=14.291;DP=553;FS=3.123;HRun=1;HaplotypeScore=88.3053;InbreedingCoeff=0.8855;MQ=60.94;MQ0=3;MQRankSum=-7.759;QD=9.75;ReadPosRankSum=-2.779;VQSLOD=0.4123;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:92.02:0,92,1006	1/1:10,0:10:19.43:117,19,0	0/0:21,0:11:10.87:0,11,120	0/1:21,2:13:8.54:9,0,140	0/0:22,0:21:58.14:0,58,702	0/0:13,0:13:39.03:0,39,443	0/0:15,0:15:33.84:0,34,464	0/0:25,0:25:69.65:0,70,783	0/0:19,0:19:54.09:0,54,614	1/1:21,1:22:47.24:286,47,0	1/1:26,0:25:65.93:397,66,0	0/0:15,0:15:45.11:0,45,497	0/0:18,0:18:54.12:0,54,593	0/0:16,0:16:41.49:0,41,474	0/0:16,0:16:48.12:0,48,560	0/0:13,0:13:39.09:0,39,446	1/1:10,0:9:19.94:115,20,0	1/1:11,1:12:24.61:137,25,0	0/0:19,0:19:25.63:0,26,447	0/0:22,0:22:62.55:0,63,719	0/0:22,0:21:56.80:0,57,613	0/0:21,0:21:55.57:0,56,664	0/0:28,0:28:81.15:0,81,864	0/0:21,0:21:60.11:0,60,657	1/1:23,2:25:54.80:375,55,0	0/0:31,0:31:62.62:0,63,906	0/0:30,0:29:80.70:0,81,935	0/0:7,0:7:6.96:0,7,103
chr10	71707809	.	AAAAAC	A	2541.47	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.833;DP=528;FS=0.978;HRun=0;HaplotypeScore=117.7046;InbreedingCoeff=0.9749;MQ=60.99;MQ0=5;MQRankSum=-8.516;QD=26.20;ReadPosRankSum=-0.785;VQSLOD=3.4372;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:92.77:0,93,2218	1/1:8,2:10:26.77:398,27,0	0/0:25,0:14:19.32:0,19,272	0/0:24,0:13:28.48:0,28,396	0/0:18,0:17:48.14:0,48,1262	0/0:13,0:13:33.10:0,33,844	0/0:11,0:11:27.01:0,27,617	0/0:23,0:23:63.08:0,63,1109	0/0:19,0:19:57.16:0,57,1345	1/1:9,6:15:23.49:545,23,0	1/1:20,1:20:45.26:561,45,0	0/0:15,0:15:42.13:0,42,1064	0/0:18,0:18:51.14:0,51,1177	0/0:18,0:18:48.14:0,48,1088	0/0:15,0:15:42.14:0,42,1211	0/0:10,0:10:30.10:0,30,761	1/1:14,1:15:19.61:265,20,0	1/1:11,0:11:23.15:328,23,0	0/0:18,0:18:44.63:0,45,770	0/0:20,0:20:41.98:0,42,1356	0/0:19,0:18:41.97:0,42,950	0/0:22,0:22:54.42:0,54,1556	0/0:25,0:25:69.21:0,69,1783	0/0:23,0:23:63.19:0,63,1532	1/1:25,0:25:50.04:631,50,0	0/0:31,0:31:82.47:0,82,2058	0/0:26,0:25:68.43:0,68,1654	0/0:3,0:3:6.02:0,6,141
chr10	71707814	.	C	CA	2199.06	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=11.273;DP=517;FS=1.546;HRun=7;HaplotypeScore=77.5160;InbreedingCoeff=0.8897;MQ=67.46;MQ0=4;MQRankSum=-8.445;QD=17.59;ReadPosRankSum=-0.427;VQSLOD=3.4781;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.13:0,87,840	1/1:2,7:9:27.08:320,27,0	0/1:31,0:22:8.57:9,0,155	0/0:24,0:12:26.25:0,26,218	0/0:15,0:14:45.06:0,45,430	0/0:12,0:12:30.05:0,30,290	0/0:9,0:9:26.26:0,26,238	0/0:22,0:22:54.08:0,54,518	0/0:21,0:21:55.90:0,56,525	1/1:8,6:15:39.10:449,39,0	1/1:7,11:18:43.89:468,44,0	0/0:14,0:14:36.04:0,36,341	0/0:17,0:17:48.01:0,48,448	0/0:17,0:17:42.03:0,42,397	0/0:15,0:15:45.07:0,45,434	0/0:11,0:11:30.05:0,30,289	1/1:5,11:16:18.05:214,18,0	1/1:2,10:12:27.08:321,27,0	0/0:17,0:17:39.87:0,40,360	0/0:21,0:21:52.87:0,53,492	0/0:16,0:15:36.06:0,36,348	0/0:20,0:20:54.07:0,54,517	0/0:24,0:25:66.08:0,66,632	0/0:24,0:24:69.09:0,69,660	1/1:1,22:23:51.15:608,51,0	0/0:32,0:32:90.13:0,90,861	0/0:26,0:25:65.28:0,65,607	0/0:2,0:2:6.01:0,6,58
chr10	71709489	.	A	AAGTCATCGTGG	28357.26	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-9.099;DP=674;FS=3.333;HRun=0;HaplotypeScore=184.3623;InbreedingCoeff=0.9965;MQ=81.91;MQ0=0;MQRankSum=-18.651;QD=107.41;ReadPosRankSum=1.631;VQSLOD=4.9842;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,21:40:72.25:4172,72,0	1/1:1,4:10:15.05:867,15,0	0/0:22,0:22:54.17:0,54,1704	0/0:24,0:24:71.40:0,71,1960	0/0:18,0:18:51.16:0,51,1697	0/0:21,0:21:60.19:0,60,1945	0/0:31,0:31:90.28:0,90,2888	0/0:25,0:25:75.26:0,75,2664	0/0:43,0:43:99:0,129,4474	1/1:6,13:26:75.26:3904,75,0	1/1:2,13:20:42.14:2255,42,0	1/1:5,12:27:54.10:2655,54,0	1/1:4,11:21:48.10:2219,48,0	0/0:30,0:30:84.27:0,84,2862	0/0:24,0:24:72.23:0,72,2452	0/0:22,0:22:63.19:0,63,2098	1/1:4,10:23:36.12:1961,36,0	1/1:5,8:16:30.10:1628,30,0	0/0:23,0:23:69.20:0,69,2073	0/0:28,0:28:84.29:0,84,2925	0/0:43,0:43:99:0,126,4399	1/1:5,12:23:45.15:2446,45,0	1/1:1,6:12:18.06:1042,18,0	1/1:6,12:22:39.13:1957,39,0	1/1:3,17:24:57.20:3250,57,0	0/0:21,0:21:60.18:0,60,1984	0/0:23,0:23:69.24:0,69,2227	0/0:12,0:12:36.10:0,36,1152
chr10	71710467	.	TTC	T	3120.02	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.101;DP=637;FS=2.592;HRun=0;HaplotypeScore=76.2311;InbreedingCoeff=0.9987;MQ=70.25;MQ0=1;MQRankSum=-1.392;QD=34.67;ReadPosRankSum=2.302;VQSLOD=5.9353;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:87.28:0,87,1534	1/1:2,5:7:21.05:282,21,0	0/0:28,0:28:76.76:0,77,1160	0/0:28,0:27:71.04:0,71,1257	0/0:24,0:24:72.22:0,72,1247	0/0:28,0:28:81.26:0,81,1441	0/0:16,0:16:42.11:0,42,736	0/0:51,0:51:99:0,144,2463	0/0:27,0:27:81.26:0,81,1448	1/1:0,22:22:60.17:859,60,0	1/1:1,25:25:60.15:835,60,0	0/0:16,0:16:48.16:0,48,870	0/0:17,0:17:51.17:0,51,934	0/0:19,0:19:54.19:0,54,981	0/0:15,0:15:42.12:0,42,709	0/0:23,0:23:69.24:0,69,1258	1/1:0,9:9:27.09:387,27,0	1/1:0,11:11:30.10:429,30,0	0/0:32,0:32:87.25:0,87,1433	0/0:25,0:25:72.22:0,72,1259	0/0:21,0:21:60.19:0,60,1056	0/0:14,0:14:42.12:0,42,703	0/0:29,0:29:78.27:0,78,1404	0/0:12,0:12:30.10:0,30,549	1/1:2,13:15:36.12:516,36,0	0/0:28,1:29:44.29:0,44,1433	0/0:35,0:35:99:0,99,1696	0/0:23,0:23:62.75:0,63,1072
chr10	71710557	.	GTC	G	2210.70	PASS	AB=0.930;AC=12;AF=0.214;AN=56;BaseQRankSum=8.672;DP=576;FS=4.321;HRun=0;HaplotypeScore=88.3868;InbreedingCoeff=0.7919;MQ=77.71;MQ0=2;MQRankSum=0.270;QD=21.05;ReadPosRankSum=1.445;VQSLOD=3.9423;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:74.05:0,74,1172	1/1:1,8:9:24.08:303,24,0	0/0:36,0:27:12.14:0,12,473	0/0:55,0:39:4.70:0,5,618	0/0:20,1:21:10.32:0,10,709	0/0:25,0:25:69.24:0,69,1147	0/0:16,0:16:45.14:0,45,723	0/0:29,1:30:34.39:0,34,1103	0/0:19,0:19:42.14:0,42,695	1/1:4,17:21:54.17:672,54,0	1/1:6,8:13:24.08:303,24,0	0/1:11,1:12:10.78:11,0,347	0/0:16,0:16:45.15:0,45,747	0/0:10,0:10:24.07:0,24,373	0/0:17,0:17:42.14:0,42,698	0/0:15,0:15:36.12:0,36,584	1/1:0,21:21:54.17:681,54,0	0/1:14,1:15:1.74:2,0,457	0/0:27,0:27:66.21:0,66,1070	0/0:22,0:22:48.16:0,48,792	0/0:21,0:21:54.18:0,54,897	0/0:14,0:14:36.12:0,36,598	0/0:23,0:23:54.16:0,54,844	0/0:13,0:13:32.88:0,33,548	1/1:3,10:13:33.11:416,33,0	0/0:21,1:22:16.31:0,16,787	0/0:23,0:23:69.22:0,69,1117	0/0:16,0:15:30.07:0,30,446
chr10	71710750	.	AG	A	2712.63	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=12.948;DP=482;FS=2.650;HRun=1;HaplotypeScore=69.5800;InbreedingCoeff=0.9886;MQ=62.03;MQ0=1;MQRankSum=0.050;QD=13.50;ReadPosRankSum=-3.157;VQSLOD=1.6537;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:42.11:268,42,0	1/1:8,0:8:17.42:122,17,0	0/0:15,0:6:14.85:0,15,132	0/0:16,0:12:16.06:0,16,204	0/0:18,0:18:49.30:0,49,544	0/0:25,0:25:72.10:0,72,818	0/0:17,0:17:51.11:0,51,591	0/0:29,0:29:76.87:0,77,859	0/0:14,0:14:39.09:0,39,452	1/1:25,0:25:65.41:467,65,0	1/1:15,0:15:32.06:198,32,0	1/1:14,1:15:40.49:260,40,0	1/1:10,2:12:29.47:199,29,0	0/0:10,0:10:24.01:0,24,282	0/0:15,0:15:42:0,42,464	0/0:13,0:13:33.07:0,33,402	1/1:21,0:21:31.16:195,31,0	1/1:9,1:10:11.10:88,11,0	0/0:15,0:15:39.98:0,40,377	0/0:25,0:25:72.06:0,72,839	0/0:14,0:14:39.02:0,39,458	1/1:16,0:16:46.86:303,47,0	1/1:22,1:23:52.88:382,53,0	1/1:13,0:13:29.52:207,30,0	1/1:21,0:21:42.89:252,43,0	0/0:16,0:16:36.78:0,37,517	0/0:29,0:29:80.87:0,81,896	0/0:10,0:10:30.05:0,30,337
chr10	71710754	.	A	AG	3068.75	PASS	AB=0.714;AC=23;AF=0.411;AN=56;BaseQRankSum=12.943;DP=480;FS=17.098;HRun=1;HaplotypeScore=70.2972;InbreedingCoeff=0.8892;MQ=65.35;MQ0=1;MQRankSum=0.369;QD=15.82;ReadPosRankSum=-0.201;VQSLOD=2.2461;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,13:20:26.20:315,26,0	1/1:1,1:6:9.02:111,9,0	0/0:21,0:12:23.90:0,24,259	0/0:16,0:12:2.65:0,3,263	0/0:19,0:19:54.16:0,54,684	0/0:25,0:25:75.23:0,75,959	0/0:17,0:17:51.17:0,51,662	0/0:27,0:27:72.18:0,72,893	0/0:14,0:14:42.14:0,42,545	1/1:4,20:24:65.48:703,65,0	1/1:1,14:15:29.65:278,30,0	1/1:13,2:15:22.39:191,22,0	1/1:11,0:11:19.38:133,19,0	0/0:10,0:10:27.02:0,27,316	0/0:14,0:14:42.11:0,42,511	0/0:14,0:14:33.11:0,33,428	1/1:4,17:22:33:434,33,0	0/1:6,4:10:9.83:63,0,10	0/0:15,0:15:45.12:0,45,544	0/0:24,0:24:69.17:0,69,839	0/0:14,0:14:39.09:0,39,472	1/1:15,1:16:44.54:303,45,0	1/1:18,1:19:34.48:251,34,0	1/1:14,0:14:9.36:133,9,0	1/1:6,15:22:34.10:374,34,0	0/0:17,0:17:24.19:0,24,555	0/0:28,0:28:78.14:0,78,932	0/0:11,0:11:33.09:0,33,413
chr10	71711903	.	TATATTTACTTA	T	5823.37	PASS	AB=0.926;AC=13;AF=0.232;AN=56;BaseQRankSum=12.486;DP=407;FS=0.966;HRun=0;HaplotypeScore=152.3300;InbreedingCoeff=0.8785;MQ=70.15;MQ0=0;MQRankSum=-12.044;QD=55.99;ReadPosRankSum=3.146;VQSLOD=4.7482;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.27:0,78,3994	1/1:2,5:7:20.43:552,20,0	0/0:14,0:14:36.99:0,37,1759	0/0:9,0:9:26.98:0,27,966	0/0:32,0:32:96.33:0,96,4989	0/0:13,0:13:39.13:0,39,1896	0/0:12,0:12:36.12:0,36,1787	0/0:27,0:27:81.28:0,81,4095	0/0:10,0:10:30.10:0,30,1550	1/1:6,13:19:54.98:1410,55,0	1/1:8,16:24:64.08:1598,64,0	0/0:6,0:6:18.06:0,18,1066	0/0:6,0:6:18.06:0,18,941	0/0:6,0:6:18.06:0,18,738	0/0:12,0:12:36.12:0,36,1939	0/0:7,0:7:21.07:0,21,1233	1/1:1,3:4:11.53:259,12,0	1/1:4,4:8:17.55:442,18,0	0/0:25,0:25:72.18:0,72,3244	0/0:27,0:27:81.26:0,81,4210	0/0:10,0:10:27.09:0,27,1561	0/0:9,0:9:27.09:0,27,1333	0/0:17,0:17:51.18:0,51,2830	0/0:5,0:5:12.04:0,12,479	1/1:2,15:17:50.51:1443,51,0	0/1:23,2:25:99:118,0,3606	0/0:21,0:21:63.22:0,63,3396	0/0:9,0:9:27.09:0,27,1328
chr10	71711914	.	AGC	A	2068.01	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.781;DP=427;FS=0.000;HRun=0;HaplotypeScore=91.7621;InbreedingCoeff=0.9719;MQ=74.87;MQ0=0;MQRankSum=-12.949;QD=25.22;ReadPosRankSum=3.996;VQSLOD=3.9963;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.28:0,81,1644	1/1:5,2:7:20.80:194,21,0	0/0:17,0:18:47.58:0,48,921	0/0:13,0:13:28.93:0,29,602	0/0:27,0:27:81.28:0,81,1631	0/0:10,0:10:30.10:0,30,597	0/0:10,0:10:30.10:0,30,573	0/0:32,0:32:96.33:0,96,1927	0/0:8,0:8:24.08:0,24,476	1/1:13,8:21:62.50:616,62,0	1/1:16,8:24:65.41:616,65,0	0/0:9,0:9:27.09:0,27,548	0/0:8,0:8:24.08:0,24,464	0/0:9,0:9:27.09:0,27,548	0/0:16,0:16:48.16:0,48,951	0/0:11,0:11:33.11:0,33,670	1/1:3,5:8:23.70:317,24,0	1/1:4,2:6:17.84:174,18,0	0/0:27,0:27:81.28:0,81,1609	0/0:31,0:31:93.30:0,93,1841	0/0:10,0:10:30.10:0,30,592	0/0:7,0:7:21.07:0,21,424	0/0:17,0:17:51.17:0,51,1013	0/0:2,0:2:6.02:0,6,122	1/1:15,1:16:47.35:337,47,0	0/0:25,0:25:36.82:0,37,1331	0/0:22,0:22:66.23:0,66,1303	0/0:6,0:6:18.06:0,18,365
chr10	71711915	.	GCTTTT	G	2293.69	PASS	AB=0.827;AC=12;AF=0.214;AN=56;BaseQRankSum=12.352;DP=432;FS=4.812;HRun=0;HaplotypeScore=118.1132;InbreedingCoeff=0.7123;MQ=74.66;MQ0=0;MQRankSum=-10.810;QD=21.44;ReadPosRankSum=5.604;VQSLOD=3.0561;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.27:0,78,2372	1/1:2,5:7:5.07:214,5,0	0/0:18,0:18:45:0,45,1161	0/0:14,0:13:11.46:0,11,751	0/0:27,0:27:75.26:0,75,2325	0/0:10,0:10:27.08:0,27,752	0/0:10,0:10:30.10:0,30,856	0/0:33,0:33:87.30:0,87,2575	0/0:8,0:8:21.07:0,21,566	1/1:8,13:21:19.80:609,20,0	1/1:8,16:24:18.22:663,18,0	0/0:9,0:9:27.08:0,27,769	0/0:9,0:9:27.09:0,27,722	0/0:10,0:10:30.10:0,30,838	0/0:17,0:17:42.14:0,42,1200	0/0:11,0:11:30.10:0,30,894	0/1:5,3:8:6.39:96,0,6	1/1:2,4:6:3.36:178,3,0	0/0:28,0:28:75.26:0,75,2148	0/0:30,0:30:87.30:0,87,2608	0/0:10,0:10:27.09:0,27,798	0/0:7,0:7:21.07:0,21,650	0/0:17,0:17:45.15:0,45,1383	0/0:2,0:2:6.02:0,6,186	1/1:1,15:16:40.50:675,40,0	0/1:23,2:25:26.63:27,0,1817	0/0:22,0:22:63.20:0,63,1799	0/0:6,0:6:18.05:0,18,401
chr10	71720356	.	TAAA	T	1918.16	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=3.090;DP=309;FS=4.007;HRun=15;HaplotypeScore=47.2666;InbreedingCoeff=0.8819;MQ=55.63;MQ0=14;MQRankSum=-0.478;QD=19.98;ReadPosRankSum=2.741;VQSLOD=2.4043;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:14:8.72:0,9,19	1/1:0,5:5:9.03:101,9,0	0/0:24,0:6:3.43:0,3,44	0/0:19,0:9:12.14:0,12,105	0/0:7,0:9:12.04:0,12,196	0/0:7,0:7:18.04:0,18,298	0/0:10,0:10:24:0,24,311	0/0:12,0:13:29.96:0,30,376	0/0:4,0:3:9.03:0,9,165	1/1:3,11:14:28.54:333,29,0	1/1:0,10:10:30.02:321,30,0	1/1:1,9:9:23.66:245,24,0	1/1:2,4:6:12.02:135,12,0	0/0:4,0:3:6.02:0,6,110	0/0:6,0:6:12.03:0,12,179	0/0:6,0:7:18.04:0,18,298	1/1:6,6:11:17.06:220,17,0	0/0:5,0:10:23.95:0,24,247	0/0:15,0:16:34.32:0,34,517	0/0:16,0:17:42.08:0,42,667	0/0:5,0:5:12:0,12,132	1/1:3,3:6:5.90:67,6,0	1/1:3,8:11:14.66:134,15,0	1/1:0,5:5:15.04:168,15,0	1/1:1,12:15:38.90:404,39,0	0/0:13,0:13:33:0,33,490	0/0:15,0:16:41.96:0,42,514	0/0:7,0:4:12.04:0,12,220
chr10	71720650	.	TGA	T	2750.03	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.583;DP=557;FS=6.952;HRun=0;HaplotypeScore=68.4831;InbreedingCoeff=0.9938;MQ=97.64;MQ0=1;MQRankSum=-2.513;QD=30.90;ReadPosRankSum=3.383;VQSLOD=5.5915;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,2034	0/0:5,0:5:15.05:0,15,266	0/0:29,0:29:55.65:0,56,1189	0/0:28,0:28:75.26:0,75,1274	0/0:14,0:14:30.10:0,30,520	0/0:22,0:22:63.22:0,63,1114	0/0:17,0:17:48.16:0,48,841	0/0:28,0:28:72.24:0,72,1227	0/0:17,0:17:51.17:0,51,904	0/0:16,0:16:39.13:0,39,688	0/0:11,0:11:33.10:0,33,543	1/1:2,10:12:33.11:453,33,0	1/1:5,20:25:57.19:783,57,0	0/0:23,0:23:63.22:0,63,1109	0/0:23,0:23:66.23:0,66,1155	0/0:14,0:14:42.14:0,42,731	0/0:21,0:21:54.19:0,54,958	0/0:15,0:15:39.13:0,39,677	0/0:15,0:15:45.15:0,45,797	0/0:11,0:11:21.07:0,21,366	0/0:55,0:55:99:0,163,2826	1/1:0,13:13:30.10:412,30,0	1/1:1,12:13:20.99:288,21,0	1/1:0,26:25:72.24:990,72,0	0/0:14,0:14:33.11:0,33,579	0/0:14,0:14:42.14:0,42,734	0/0:26,0:26:78.23:0,78,1326	0/0:10,0:10:30.10:0,30,527
chr10	71720918	.	AACACACACACACACACACACACAC	A	309.66	PASS	AB=0.837;AC=2;AF=0.037;AN=54;BaseQRankSum=3.457;DP=435;FS=0.000;HRun=0;HaplotypeScore=217.9182;InbreedingCoeff=-0.0788;MQ=62.39;MQ0=40;MQRankSum=-3.249;QD=7.37;ReadPosRankSum=-2.142;VQSLOD=2.0310;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,9:23:13.95:328,0,14	0/0:6,0:6:3.01:0,3,195	./.	0/0:23,0:15:3.01:0,3,41	0/0:7,0:7:12.04:0,12,1088	0/0:14,0:13:15.05:0,15,1138	0/0:13,0:9:9.03:0,9,565	0/0:16,0:14:5.23:0,5,120	0/0:15,0:14:15.04:0,15,857	0/0:19,0:18:18.06:0,18,1247	0/0:11,0:14:9.03:0,9,662	0/0:5,0:5:6.02:0,6,175	0/0:12,0:11:15.05:0,15,564	0/0:14,0:11:12.04:0,12,843	0/0:20,0:19:21.05:0,21,1278	0/0:13,0:12:11.96:0,12,413	0/0:26,0:20:30.10:0,30,1619	0/1:17,0:16:68.72:69,0,241	0/0:12,0:9:9.94:0,10,451	0/0:16,0:15:3.01:0,3,274	0/0:26,0:24:24.04:0,24,1281	0/0:11,0:13:15.03:0,15,279	0/0:10,0:13:2.94:0,3,239	0/0:19,0:15:8.19:0,8,306	0/0:6,0:6:9.03:0,9,539	0/0:12,0:10:12.04:0,12,467	0/0:20,0:18:27.56:0,28,2184	0/0:13,0:13:19.61:0,20,1150
chr10	71723509	.	G	GA	9061.83	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-15.897;DP=766;FS=1.642;HRun=7;HaplotypeScore=67.4255;InbreedingCoeff=0.9979;MQ=82.92;MQ0=0;MQRankSum=-1.168;QD=28.95;ReadPosRankSum=2.657;VQSLOD=5.5030;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:21:48.15:579,48,0	1/1:1,10:11:27.08:326,27,0	0/0:20,0:20:39.03:0,39,363	0/0:21,0:22:45.07:0,45,434	0/0:39,0:39:99:0,108,1036	0/0:33,0:33:81.12:0,81,782	0/0:26,0:26:72.12:0,72,695	0/0:39,0:39:96.13:0,96,918	0/0:29,0:29:75.11:0,75,724	1/1:3,34:37:99:1221,105,0	1/1:3,29:32:78.24:942,78,0	1/1:3,34:37:90.28:1084,90,0	1/1:4,35:39:99:1196,99,0	0/0:27,0:27:69.06:0,69,648	0/0:37,0:37:99:0,99,951	0/0:30,0:30:81.13:0,81,782	1/1:4,25:29:63.19:761,63,0	1/1:2,7:9:18.05:217,18,0	0/0:20,0:20:48.07:0,48,464	0/0:39,0:39:99:0,114,1094	0/0:16,0:16:39.06:0,39,376	1/1:3,31:34:84.22:998,84,0	1/1:3,29:32:81.25:975,81,0	1/1:2,12:14:30.09:362,30,0	1/1:2,16:18:33.10:399,33,0	0/0:25,1:26:26.85:0,27,543	0/0:43,0:43:99:0,117,1123	0/0:7,0:7:20.95:0,21,180
chr10	71724266	.	CTT	C	4414.60	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=12.887;DP=619;FS=0.329;HRun=10;HaplotypeScore=94.4543;InbreedingCoeff=0.9939;MQ=72.61;MQ0=0;MQRankSum=-0.962;QD=18.39;ReadPosRankSum=4.117;VQSLOD=3.6421;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:25:52.40:0,52,180	1/1:0,0:7:19.21:83,19,0	0/0:22,0:19:11.55:0,12,367	0/0:19,0:17:30.18:0,30,286	0/0:18,0:19:48.10:0,48,696	0/0:22,0:23:69.21:0,69,1031	0/0:12,0:14:35.60:0,36,488	0/0:31,0:31:78.72:0,79,1170	0/0:28,0:29:81.25:0,81,1220	1/1:0,0:27:70.39:302,70,0	1/1:5,0:25:52.12:227,52,0	1/1:3,18:21:45.12:502,45,0	1/1:3,21:24:54.13:602,54,0	0/0:14,0:14:36.12:0,36,566	0/0:24,0:24:63.67:0,64,976	0/0:14,0:14:42.13:0,42,646	1/1:1,0:19:41.17:179,41,0	1/1:3,20:23:50.80:550,51,0	0/0:23,0:24:56.67:0,57,842	0/0:32,0:33:87.27:0,87,1307	0/0:9,0:9:27.09:0,27,429	1/1:0,19:19:54.13:599,54,0	1/1:0,27:27:65.61:735,66,0	1/1:1,15:16:33.08:368,33,0	1/1:5,0:32:62.41:268,62,0	0/0:22,0:24:38.74:0,39,840	0/0:31,0:32:90.24:0,90,1298	0/0:19,0:19:45.08:0,45,600
chr10	71724754	.	AGAG	A	5224.38	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=10.945;DP=647;FS=0.000;HRun=0;HaplotypeScore=97.5094;InbreedingCoeff=0.9426;MQ=60.98;MQ0=9;MQRankSum=0.120;QD=22.23;ReadPosRankSum=4.075;VQSLOD=4.8052;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:33.33:0,33,348	1/1:1,7:8:18.06:246,18,0	0/0:28,0:12:17.88:0,18,285	0/0:31,0:24:22.79:0,23,333	0/0:33,0:33:78.27:0,78,1551	0/0:34,0:34:63.05:0,63,1053	0/0:27,0:27:63.19:0,63,1151	0/0:13,0:13:15.04:0,15,248	0/0:23,0:23:45.15:0,45,883	1/1:8,21:28:60.18:810,60,0	1/1:3,15:18:42.14:584,42,0	1/1:8,15:23:33.11:464,33,0	1/1:5,7:12:15.04:193,15,0	0/0:12,0:12:24.08:0,24,469	0/0:29,0:29:63.03:0,63,1140	0/0:22,0:22:60.19:0,60,1149	1/1:9,20:29:48.16:674,48,0	1/1:4,0:7:2.98:21,3,0	0/0:26,0:25:42.10:0,42,740	0/0:31,1:32:21.06:0,21,1122	0/0:23,0:21:30.06:0,30,551	1/1:7,19:26:50.99:715,51,0	1/1:13,17:29:32.74:463,33,0	1/1:11,15:26:30.10:421,30,0	1/1:10,17:27:45.15:632,45,0	0/0:29,1:30:3.28:0,3,1203	0/0:18,0:18:48.10:0,48,876	0/0:11,0:11:33.11:0,33,624
chr10	71725187	.	C	CA	4103.58	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-13.045;DP=732;FS=4.469;HRun=7;HaplotypeScore=65.6492;InbreedingCoeff=0.9995;MQ=77.96;MQ0=0;MQRankSum=-1.206;QD=30.85;ReadPosRankSum=1.970;VQSLOD=4.0071;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,129,1238	1/1:2,9:11:27.08:324,27,0	0/0:17,0:17:38.87:0,39,346	0/0:15,0:15:36.31:0,36,318	0/0:31,0:31:90.14:0,90,869	0/0:26,0:26:72.11:0,72,695	0/0:17,0:17:45.07:0,45,434	0/0:25,0:25:66.09:0,66,632	0/0:30,0:30:84.13:0,84,811	1/1:2,34:35:99:1232,102,0	1/1:1,17:18:48.06:547,48,0	0/0:37,0:37:99:0,102,984	0/0:26,0:26:66.10:0,66,637	0/0:27,0:27:75.10:0,75,717	0/0:24,0:24:63.07:0,63,601	0/0:28,0:28:78.12:0,78,753	1/1:4,31:35:61.34:1022,61,0	0/0:19,0:19:54.09:0,54,522	0/0:16,0:16:45.06:0,45,430	0/0:32,0:32:90.14:0,90,868	0/0:20,0:20:57.09:0,57,550	0/0:30,0:30:78.12:0,78,753	0/0:31,0:31:87.12:0,87,835	0/0:28,0:28:69.10:0,69,666	1/1:3,30:33:81.25:979,81,0	0/0:27,0:27:72.10:0,72,687	0/0:34,0:34:93.15:0,93,897	0/0:11,0:11:27.04:0,27,261
chr10	71727328	.	G	GCTCC	15176.31	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-11.519;DP=688;FS=1.425;HRun=0;HaplotypeScore=113.6138;InbreedingCoeff=0.9899;MQ=88.52;MQ0=0;MQRankSum=-9.876;QD=54.79;ReadPosRankSum=1.662;VQSLOD=6.0421;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,37:48:84.25:2168,84,0	1/1:3,11:14:27.05:659,27,0	0/0:29,0:29:72.21:0,72,1238	0/0:26,0:28:8.25:0,8,1024	0/0:19,0:19:42.61:0,43,782	0/0:17,0:17:51.15:0,51,919	0/0:25,0:25:69.24:0,69,1281	0/0:29,0:29:72.25:0,72,1344	0/0:25,0:25:72.22:0,72,1282	1/1:5,17:22:63.22:1653,63,0	1/1:4,16:22:42.14:1113,42,0	1/1:6,20:26:60.21:1598,60,0	1/1:1,24:29:65.82:1657,66,0	0/0:25,0:25:63.21:0,63,1176	0/0:41,0:41:99:0,120,2172	0/0:17,0:17:48.16:0,48,896	1/1:10,21:32:57.20:1480,57,0	1/1:1,14:15:36.12:960,36,0	0/0:22,0:22:48.16:0,48,873	0/0:20,0:20:54.16:0,54,941	0/0:41,0:41:99:0,102,1902	1/1:1,15:16:39.13:1038,39,0	1/1:1,15:18:32.53:867,33,0	1/1:3,19:24:47.90:1266,48,0	1/1:2,8:11:27.09:715,27,0	0/0:29,0:29:87.30:0,87,1614	0/0:36,0:36:99:0,105,1959	0/0:8,0:8:24.08:0,24,448
chr10	71727517	.	G	GAT	3819.90	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-11.412;DP=630;FS=11.811;HRun=0;HaplotypeScore=73.6222;InbreedingCoeff=0.9415;MQ=78.40;MQ0=1;MQRankSum=-0.506;QD=39.79;ReadPosRankSum=-0.365;VQSLOD=4.4072;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:52:99:0,129,1601	0/0:11,0:11:27.06:0,27,327	0/0:17,0:17:20.16:0,20,264	0/0:13,0:13:24.03:0,24,286	0/0:36,0:36:96.29:0,96,1206	0/0:14,0:14:39.12:0,39,493	0/0:18,0:18:54.17:0,54,688	0/0:28,0:28:54.17:0,54,688	0/0:25,0:26:66.02:0,66,800	0/0:25,0:25:69.21:0,69,869	0/0:13,0:13:39.12:0,39,496	1/1:4,14:17:0.93:563,1,0	1/1:1,18:19:48.16:803,48,0	0/0:11,0:11:33.09:0,33,407	0/0:35,0:35:84.27:0,84,1069	0/0:15,0:15:36.12:0,36,458	0/0:16,0:16:45.14:0,45,573	0/0:32,0:32:78.23:0,78,978	0/0:15,0:15:39.12:0,39,496	0/0:33,0:33:87.28:0,87,1107	0/0:17,0:17:39.11:0,39,482	1/1:3,21:24:63.22:1048,63,0	1/1:2,19:21:54.18:904,54,0	1/1:3,11:14:30.10:502,30,0	0/0:29,0:29:84.27:0,84,1069	0/0:31,0:31:78.25:0,78,992	0/0:32,0:31:90.29:0,90,1146	0/0:15,0:15:39.07:0,39,465
chr10	71729016	.	T	TA	2981.54	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-3.019;DP=477;FS=0.870;HRun=10;HaplotypeScore=51.2005;InbreedingCoeff=0.9440;MQ=70.43;MQ0=4;MQRankSum=-1.566;QD=17.96;ReadPosRankSum=2.199;VQSLOD=4.2884;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:30:56.92:285,57,0	1/1:1,5:6:6.02:64,6,0	0/0:16,0:13:25.73:0,26,176	0/0:16,0:8:10.75:0,11,65	0/0:14,0:16:37.98:0,38,301	0/0:21,0:21:56.93:0,57,468	0/0:12,0:13:28.99:0,29,227	0/0:36,0:36:83.83:0,84,687	0/0:14,0:14:38.96:0,39,320	1/1:7,10:17:5.43:263,5,0	1/1:1,12:13:33.08:352,33,0	1/1:1,10:11:21.05:224,21,0	1/1:4,10:15:26.94:270,27,0	0/0:13,0:13:38.95:0,39,320	0/0:14,0:14:41.95:0,42,345	0/0:13,0:13:32.95:0,33,271	1/1:3,18:21:48.12:512,48,0	0/0:15,0:16:27.54:0,28,305	0/0:29,1:30:53.87:0,54,437	0/0:26,0:26:65.86:0,66,536	0/0:7,0:7:8.97:0,9,74	1/1:0,3:3:9.02:96,9,0	1/1:3,14:18:41.94:430,42,0	1/1:1,11:12:27.07:288,27,0	1/1:5,14:19:39.10:416,39,0	0/0:27,0:27:62.88:0,63,515	0/0:21,0:21:53.93:0,54,443	0/0:12,0:12:35.96:0,36,296
chr10	71729269	.	TCACACACACA	T	4547.20	PASS	AB=0.962;AC=11;AF=0.196;AN=56;BaseQRankSum=9.004;DP=641;FS=0.553;HRun=0;HaplotypeScore=183.7270;InbreedingCoeff=0.8163;MQ=62.54;MQ0=11;MQRankSum=-9.309;QD=40.60;ReadPosRankSum=2.780;VQSLOD=4.2734;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:8.99:0,9,233	1/1:2,9:11:24.08:730,24,0	0/0:44,0:23:14.22:0,14,890	0/0:43,0:17:39.13:0,39,1297	0/0:18,0:21:45.15:0,45,1934	0/0:25,0:26:60.21:0,60,2749	0/0:11,0:11:18.06:0,18,847	0/0:27,0:28:45.15:0,45,2029	0/0:18,0:20:54.18:0,54,2297	1/1:5,11:16:33.07:824,33,0	1/1:3,13:16:29.84:816,30,0	0/0:9,0:15:21.07:0,21,613	0/0:5,0:11:6.02:0,6,173	0/0:22,0:23:51.18:0,51,2263	0/0:29,0:30:69.24:0,69,3411	0/0:25,0:25:60.21:0,60,2684	1/1:3,7:10:15.05:419,15,0	0/0:16,0:16:25.64:0,26,865	0/0:15,0:17:42.13:0,42,1525	0/0:26,0:28:57.20:0,57,2334	0/0:28,0:29:63.22:0,63,2695	0/0:14,0:26:12.04:0,12,390	0/0:10,0:20:14.58:0,15,402	0/0:23,0:23:6.30:0,6,278	1/1:9,24:34:60.20:1731,60,0	0/1:24,1:25:27.97:28,0,2254	0/0:21,0:24:63.69:0,64,3027	0/0:13,0:15:42.14:0,42,1746
chr10	71730386	.	ACCCCCAC	A	765.26	PASS	AB=0.987;AC=17;AF=0.340;AN=50;BaseQRankSum=0.672;DP=255;FS=18.696;HRun=0;HaplotypeScore=62.9962;InbreedingCoeff=0.4623;MQ=88.25;MQ0=1;MQRankSum=-4.348;QD=6.89;ReadPosRankSum=-2.126;VQSLOD=-0.2135;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:11:8.99:0,9,152	1/1:5,0:5:2.51:17,3,0	0/0:11,0:11:21.04:0,21,413	0/0:17,0:13:20.81:0,21,386	0/0:7,0:7:12.02:0,12,220	0/0:10,0:10:18.04:0,18,505	0/0:7,0:7:5.86:0,6,111	0/0:9,0:9:12.01:0,12,268	0/0:8,0:8:24.08:0,24,646	0/1:8,0:8:6.32:54,0,6	1/1:19,0:18:5.96:162,6,0	0/1:13,0:14:17.45:57,0,17	1/1:8,0:8:5.52:34,6,0	0/0:9,0:9:21.02:0,21,474	0/0:9,0:9:19.31:0,19,534	0/0:8,0:8:15.05:0,15,492	0/1:14,0:14:38.81:124,0,39	1/1:0,13:13:14.84:375,15,0	0/0:6,0:6:8.57:0,9,139	./.	0/0:8,0:11:18.03:0,18,364	1/1:3,0:3:8.92:73,9,0	0/1:5,0:5:10.86:11,0,13	1/1:12,0:12:2.92:17,3,0	0/1:10,0:10:0:0,0,0	./.	0/0:7,0:8:15.05:0,15,352	./.
chr10	71730387	.	CCCCCA	C	1441.31	PASS	AB=1.000;AC=24;AF=0.444;AN=54;BaseQRankSum=-2.132;DP=246;FS=36.745;HRun=0;HaplotypeScore=51.1853;InbreedingCoeff=0.7731;MQ=87.72;MQ0=1;MQRankSum=-3.419;QD=12.32;ReadPosRankSum=-2.788;VQSLOD=-0.1277;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:8.94:0,9,93	1/1:0,5:5:2.62:61,3,0	0/0:11,0:11:20.50:0,21,314	0/0:17,0:12:20.80:0,21,338	0/0:7,0:7:11.84:0,12,148	0/0:10,0:10:18.04:0,18,364	0/0:6,0:6:5.98:0,6,55	0/0:9,0:9:14.80:0,15,232	0/0:8,0:8:24.05:0,24,439	1/1:8,0:8:11.81:91,12,0	1/1:16,2:17:29.50:279,30,0	1/1:13,0:13:27.25:209,27,0	1/1:1,7:8:5.69:123,6,0	0/0:9,0:9:20.91:0,21,344	0/0:9,0:9:19.28:0,19,368	0/0:7,0:7:15.04:0,15,354	1/1:12,2:14:38.97:399,39,0	1/1:13,0:13:14.84:224,15,0	0/0:5,0:5:8.55:0,9,112	0/1:4,0:4:0.01:0,0,0	0/0:11,0:11:18.01:0,18,235	1/1:3,0:3:8.92:82,9,0	1/1:1,4:5:5.51:80,6,0	1/1:3,8:11:3.01:62,3,0	1/1:1,9:10:2.97:20,3,0	0/1:5,0:5:0:0,0,0	0/0:8,0:8:14.75:0,15,223	./.
chr10	71730954	.	TAA	T	3222.65	PASS	AB=0.522;AC=15;AF=0.268;AN=56;BaseQRankSum=5.401;DP=594;FS=1.704;HRun=11;HaplotypeScore=83.9935;InbreedingCoeff=0.9120;MQ=67.95;MQ0=1;MQRankSum=-0.273;QD=20.27;ReadPosRankSum=3.232;VQSLOD=3.1958;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,38:41:99:1116,104,0	1/1:2,9:11:24.05:255,24,0	0/0:14,0:12:20.17:0,20,247	0/0:10,0:9:15.52:0,16,123	0/0:31,0:35:98.66:0,99,1320	0/0:15,0:16:47.62:0,48,660	0/0:16,0:19:53.15:0,53,735	0/0:21,0:22:38.60:0,39,522	0/0:14,0:14:39.09:0,39,501	1/1:5,26:31:78.13:812,78,0	1/1:2,17:19:42.08:447,42,0	0/0:1,1:22:23.99:0,24,165	0/0:2,1:24:49.78:0,50,171	0/0:18,0:22:59.10:0,59,761	0/0:33,0:35:98.26:0,98,1346	0/0:23,0:24:36.53:0,37,866	1/1:2,14:16:36.09:383,36,0	1/1:1,0:15:26.94:83,27,0	0/0:25,0:26:65.70:0,66,952	0/0:26,0:26:60.17:0,60,861	0/0:15,0:17:38.62:0,39,561	0/0:2,0:15:27.80:0,28,105	0/0:5,0:24:47.41:0,47,163	0/1:1,1:12:6.46:6,0,52	1/1:2,11:13:30.07:319,30,0	0/0:23,2:25:9.64:0,10,771	0/0:28,0:29:69.09:0,69,936	0/0:14,0:15:38.61:0,39,543
chr10	71731753	.	C	CAA	2559.25	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=2.268;DP=566;FS=5.823;HRun=13;HaplotypeScore=92.2052;InbreedingCoeff=0.9339;MQ=72.14;MQ0=0;MQRankSum=-1.138;QD=12.36;ReadPosRankSum=-3.217;VQSLOD=1.9945;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,1:26:20.97:117,21,0	1/1:2,3:6:8.99:88,9,0	0/0:20,0:12:4.92:0,5,63	0/0:19,0:12:13.30:0,13,82	0/0:22,0:26:38.27:0,38,418	0/0:22,0:23:44.68:0,45,436	0/0:17,0:20:29.76:0,30,308	0/0:23,0:23:20.42:0,20,184	0/0:20,0:20:2.83:0,3,187	1/1:6,9:17:35.95:364,36,0	1/1:7,9:16:31.57:264,32,0	1/1:5,14:20:14.41:124,14,0	1/1:4,11:16:18.06:233,18,0	0/0:17,0:21:20.56:0,21,271	0/0:24,0:25:22.55:0,23,333	0/0:26,0:28:37.86:0,38,356	1/1:10,16:28:31.97:341,32,0	0/0:17,0:17:29.77:0,30,264	0/0:23,0:25:36.96:0,37,304	0/0:16,0:18:20.68:0,21,225	0/0:16,0:18:32.27:0,32,257	1/1:6,14:20:24.70:447,25,0	1/1:6,15:23:33.36:413,33,0	1/1:4,9:13:14.25:171,14,0	1/1:6,12:20:20.47:216,20,0	0/0:18,0:18:26.84:0,27,237	0/0:20,0:20:41.75:0,42,369	0/0:16,0:18:32.70:0,33,329
chr10	71732893	.	A	AAAAC	572.71	PASS	AB=0.640;AC=1;AF=0.018;AN=56;BaseQRankSum=-1.841;DP=749;FS=0.000;HRun=0;HaplotypeScore=120.9097;InbreedingCoeff=0.0148;MQ=71.81;MQ0=0;MQRankSum=-1.678;QD=35.79;ReadPosRankSum=0.397;VQSLOD=3.3413;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:38:99:0,99,1633	0/0:15,0:15:36.12:0,36,605	0/0:24,0:24:35.45:0,35,542	0/0:16,0:16:21.54:0,22,340	0/0:28,0:28:69.22:0,69,1129	0/0:23,0:23:51.17:0,51,847	0/0:27,0:27:54.15:0,54,846	0/0:22,0:22:33.11:0,33,545	0/0:31,0:31:78.24:0,78,1256	0/0:29,0:29:72.23:0,72,1162	0/0:17,0:18:42.14:0,42,705	0/0:40,0:40:99:0,99,1609	0/0:33,0:33:87.30:0,87,1458	0/0:27,0:27:60.20:0,60,976	0/0:33,0:32:69.20:0,69,1084	0/0:32,0:32:72.22:0,72,1156	0/0:31,0:32:69.17:0,69,1069	0/1:7,9:16:17.27:647,0,17	0/0:16,0:17:33.10:0,33,487	0/0:20,0:22:51.16:0,51,812	0/0:45,0:45:99:0,114,1859	0/0:25,0:25:63.19:0,63,1030	0/0:28,0:29:78.26:0,78,1277	0/0:35,0:35:93.30:0,93,1527	0/0:33,0:33:81.28:0,81,1349	0/0:14,0:14:33.11:0,33,554	0/0:40,0:41:99:0,105,1713	0/0:4,0:4:12.04:0,12,202
chr10	71733985	.	T	TA	616.26	PASS	AB=0.857;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.664;DP=577;FS=0.000;HRun=16;HaplotypeScore=87.0729;InbreedingCoeff=-0.0159;MQ=75.69;MQ0=2;MQRankSum=-1.236;QD=2.54;ReadPosRankSum=-1.609;VQSLOD=-0.5222;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:26:26.01:0,26,182	0/1:3,8:11:1.84:75,0,2	0/0:29,0:19:14.86:0,15,80	0/1:25,0:18:13.85:14,0,22	0/0:30,1:34:25.71:0,26,246	0/1:14,3:20:33.96:34,0,108	0/1:7,3:10:30.13:30,0,49	0/1:20,1:24:19.77:20,0,78	0/0:15,0:17:23.30:0,23,116	0/1:15,8:22:17.87:39,0,18	1/1:12,8:20:15.80:116,16,0	0/0:13,3:17:0.58:0,1,87	0/0:20,1:22:7.31:0,7,171	0/0:22,1:22:25.21:0,25,149	0/0:24,0:24:34.50:0,35,190	0/0:21,0:22:51.49:0,51,280	1/1:16,8:25:3.07:196,3,0	0/0:17,0:18:22.18:0,22,122	0/0:19,0:21:9.03:0,9,125	0/0:25,0:28:2.43:0,2,137	0/0:10,0:10:7.38:0,7,62	0/0:19,0:21:25.49:0,25,130	0/1:19,0:19:10.22:10,0,105	0/1:11,1:13:2.69:3,0,73	0/1:13,16:29:21.09:217,0,21	0/1:11,1:14:3.41:3,0,58	0/0:17,1:20:7.68:0,8,111	0/1:9,0:10:10.55:11,0,14
chr10	71734939	.	GAGAGAC	G	2205.53	PASS	AB=0.995;AC=27;AF=0.482;AN=56;BaseQRankSum=1.369;DP=640;FS=17.687;HRun=0;HaplotypeScore=143.0656;InbreedingCoeff=0.0421;MQ=54.72;MQ0=31;MQRankSum=-0.202;QD=5.14;ReadPosRankSum=-4.214;VQSLOD=-0.4512;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,4:37:39.66:422,40,0	1/1:13,0:13:10.93:117,11,0	0/1:29,0:11:21.74:22,0,38	0/0:42,0:11:10.45:0,10,51	0/1:26,0:22:27.48:27,0,339	0/1:22,0:21:43.25:43,0,225	0/0:28,0:27:10.66:0,11,446	0/1:32,0:32:49:49,0,262	0/0:23,0:23:27.46:0,27,518	0/1:20,0:17:29.44:225,0,29	0/1:10,0:10:15.94:16,0,69	1/1:21,0:21:26.74:336,27,0	1/1:17,0:16:31.54:311,32,0	0/1:13,0:13:29.16:29,0,105	0/0:28,0:26:17.58:0,18,313	0/0:26,0:26:24.63:0,25,455	0/1:14,0:14:29.10:92,0,29	0/1:13,1:14:38.88:62,0,39	0/1:13,0:10:3.07:3,0,146	0/0:22,0:21:19.73:0,20,174	0/0:16,0:13:1.33:0,1,160	1/1:20,0:19:14.68:99,15,0	1/1:22,0:22:14.97:122,15,0	1/1:27,0:27:27.94:166,28,0	0/1:33,0:32:52.01:165,0,52	0/1:28,0:27:57.28:57,0,472	0/0:26,0:26:23.76:0,24,281	0/1:16,0:15:27.27:27,0,307
chr10	71734943	.	GAC	G	3168.85	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=2.470;DP=639;FS=20.194;HRun=0;HaplotypeScore=113.1461;InbreedingCoeff=0.1214;MQ=51.10;MQ0=31;MQRankSum=-1.376;QD=6.35;ReadPosRankSum=-2.941;VQSLOD=1.3582;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:37:39.70:340,40,0	1/1:14,0:14:11.15:117,11,0	0/1:27,0:9:21.32:21,0,38	0/0:34,0:7:10.25:0,10,52	0/1:33,0:29:99:132,0,255	0/1:21,0:20:64.59:65,0,139	0/1:30,0:29:32.08:32,0,329	0/1:31,0:30:87.47:87,0,204	0/1:24,0:24:33.63:34,0,323	1/1:18,0:15:32.85:314,33,0	1/1:11,0:11:3.57:49,4,0	1/1:16,7:23:29.75:301,30,0	1/1:11,3:14:32.73:282,33,0	0/1:12,0:12:29.20:29,0,44	0/0:29,0:28:17.57:0,18,226	0/0:26,0:26:23.62:0,24,263	1/1:12,1:13:18.76:136,19,0	1/1:2,12:14:10.56:117,11,0	0/1:12,0:11:25.14:25,0,140	0/0:10,15:24:20.91:0,21,188	0/1:16,0:13:42.54:43,0,108	1/1:22,1:21:23.87:218,24,0	1/1:19,1:20:14.97:122,15,0	1/1:22,5:27:29.51:311,30,0	1/1:29,3:31:44.20:407,44,0	0/1:28,0:27:86.76:87,0,349	0/0:26,0:26:22.94:0,23,178	0/1:17,0:16:88.69:89,0,120
chr10	71734945	.	C	CAGAG	3071.96	PASS	AB=0.959;AC=41;AF=0.820;AN=50;BaseQRankSum=-3.191;DP=651;FS=18.138;HRun=0;HaplotypeScore=138.1739;InbreedingCoeff=-0.0675;MQ=50.33;MQ0=31;MQRankSum=1.452;QD=5.33;ReadPosRankSum=-1.772;VQSLOD=1.4167;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:36:8.65:90,0,9	0/1:14,0:14:0.01:0,0,0	./.	./.	0/1:33,0:29:18.93:251,0,19	1/1:22,0:21:23.55:245,24,0	0/1:29,0:28:92.82:165,0,93	1/1:33,0:32:30.06:248,30,0	1/1:21,2:24:30.24:431,30,0	1/1:18,0:15:8.48:88,8,0	1/1:11,0:11:5.93:56,6,0	0/1:23,0:23:14.20:14,0,39	0/1:14,0:14:20.47:29,0,20	1/1:3,8:14:8.17:42,8,0	1/1:11,18:32:5.75:85,6,0	0/1:12,16:29:30.55:171,0,31	1/1:14,0:14:8.43:55,8,0	0/1:14,0:14:0.32:0,0,40	1/1:12,0:11:9:80,9,0	1/1:29,0:28:6.49:109,6,0	1/1:17,0:14:14.48:144,14,0	1/1:23,0:21:2.04:6,2,0	./.	1/1:27,0:27:12.50:83,12,0	0/1:33,0:32:27.66:99,0,28	1/1:28,0:27:39.67:381,40,0	1/1:6,19:27:11.77:229,12,0	1/1:17,0:16:12.23:100,12,0
chr10	71734963	.	G	GAGAC	1274.30	PASS	AB=0.966;AC=18;AF=0.321;AN=56;BaseQRankSum=2.582;DP=612;FS=5.962;HRun=0;HaplotypeScore=132.0458;InbreedingCoeff=-0.1571;MQ=49.81;MQ0=15;MQRankSum=3.250;QD=3.43;ReadPosRankSum=4.612;VQSLOD=1.8425;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:28:9.37:9,0,86	0/1:1,6:10:0.01:0,0,0	0/0:17,0:6:10.45:0,10,96	0/0:27,0:6:1.40:0,1,38	0/1:32,0:29:41.25:41,0,174	0/1:15,0:15:44.01:44,0,72	0/1:27,0:27:15.76:16,0,269	0/0:32,0:31:14.67:0,15,435	0/1:20,0:20:91.75:175,0,92	0/1:18,0:17:33.60:188,0,34	1/1:15,0:15:20.38:210,20,0	0/0:23,0:23:16.01:0,16,116	0/0:14,0:14:9.74:0,10,154	0/0:16,0:16:8.92:0,9,76	0/1:33,0:32:23.88:24,0,150	0/1:28,0:28:85.59:86,0,173	1/1:18,0:18:23.96:235,24,0	0/0:16,0:16:17.79:0,18,145	0/0:9,0:8:12.43:0,12,103	0/1:28,0:28:33.55:34,0,130	0/1:16,0:14:26.49:26,0,73	0/0:22,0:21:8.18:0,8,79	0/0:22,0:22:2.98:0,3,25	0/0:26,0:27:10.23:0,10,47	0/1:29,0:27:99:160,0,110	0/1:24,0:23:57.21:57,0,109	0/1:28,0:28:74.34:131,0,74	0/0:16,0:16:16.43:0,16,180
chr10	71734971	.	GAC	G	564.95	PASS	AB=0.988;AC=21;AF=0.375;AN=56;BaseQRankSum=5.507;DP=628;FS=62.426;HRun=0;HaplotypeScore=120.5450;InbreedingCoeff=-0.1400;MQ=54.95;MQ0=15;MQRankSum=0.057;QD=1.35;ReadPosRankSum=-2.366;VQSLOD=-0.4256;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:26:13.17:13,0,203	0/0:11,0:11:4.81:0,5,30	0/0:23,0:9:12.05:0,12,118	0/1:35,0:16:18.37:18,0,96	0/0:28,0:25:22:0,22,396	0/1:14,0:14:40.81:41,0,217	0/1:26,0:26:0.27:0,0,282	0/1:34,0:33:20.25:20,0,509	0/1:18,2:20:99:112,0,140	0/0:18,0:17:2.67:0,3,320	0/0:17,0:17:26.42:0,26,233	1/1:23,0:23:12.97:108,13,0	1/1:12,1:13:20.14:121,20,0	0/0:15,0:15:16.75:0,17,121	0/0:33,0:32:26.91:0,27,217	0/0:30,0:30:38.91:0,39,359	0/0:18,0:18:10.89:0,11,207	0/1:15,0:15:3.65:4,0,91	0/1:14,0:13:18.60:19,0,194	0/1:29,0:29:14.57:15,0,209	0/1:15,0:14:18.73:19,0,147	0/0:18,0:17:0.26:0,0,1	1/1:22,0:22:2.14:8,2,0	0/1:26,0:27:0.53:30,0,1	0/1:29,0:27:62.82:63,0,208	0/1:25,0:24:54.65:55,0,284	0/1:31,0:31:27.57:28,0,170	0/1:16,1:17:51.34:51,0,143
chr10	71734973	.	CAGAG	C	547.47	PASS	AB=0.966;AC=10;AF=0.179;AN=56;BaseQRankSum=6.487;DP=630;FS=14.922;HRun=0;HaplotypeScore=136.8951;InbreedingCoeff=0.6550;MQ=56.27;MQ0=15;MQRankSum=-0.517;QD=3.91;ReadPosRankSum=0.482;VQSLOD=1.7683;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:26.79:0,27,457	0/0:11,0:11:4.83:0,5,55	0/0:23,0:10:23.35:0,23,278	0/1:37,0:18:1.66:2,0,370	0/0:27,0:24:51.03:0,51,782	0/0:15,0:15:33.05:0,33,542	0/0:25,0:25:29.40:0,29,518	0/0:32,0:31:77.33:0,77,1183	0/0:20,0:20:32.86:0,33,494	0/0:19,0:18:47.56:0,48,730	0/0:17,0:17:26.68:0,27,469	1/1:16,7:23:21.03:281,21,0	1/1:11,2:13:24.05:304,24,0	0/0:15,0:15:18.06:0,18,268	0/0:32,0:31:27.06:0,27,464	0/0:28,0:28:39.13:0,39,725	0/0:18,0:18:28.28:0,28,448	0/0:15,0:15:26.72:0,27,374	0/0:13,0:12:30.10:0,30,481	0/0:29,0:29:30.92:0,31,474	0/0:16,0:15:24.06:0,24,391	1/1:19,1:19:1.98:7,2,0	1/1:19,1:20:2.52:32,3,0	0/1:25,2:27:25.88:64,0,26	0/0:32,0:30:43.81:0,44,632	0/0:23,0:22:57.31:0,57,723	0/0:34,0:34:44.96:0,45,689	0/0:17,0:17:43.91:0,44,575
chr10	71734977	.	G	GAC	613.60	PASS	AB=0.658;AC=9;AF=0.161;AN=56;BaseQRankSum=5.777;DP=626;FS=8.369;HRun=0;HaplotypeScore=123.7901;InbreedingCoeff=0.6795;MQ=58.93;MQ0=13;MQRankSum=0.052;QD=6.33;ReadPosRankSum=-0.180;VQSLOD=2.8419;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:27.24:0,27,434	0/0:12,0:12:5.76:0,6,70	0/0:26,0:12:23.79:0,24,296	0/0:42,0:22:41:0,41,496	0/0:26,0:23:54.03:0,54,721	0/0:15,0:15:33.04:0,33,453	0/0:24,0:24:29.35:0,29,470	0/0:31,0:31:78.10:0,78,1049	0/0:19,0:19:32.75:0,33,422	0/0:19,0:18:50.33:0,50,609	0/0:18,0:18:30.04:0,30,405	1/1:9,12:21:21.02:257,21,0	1/1:3,10:13:23.90:370,24,0	0/0:15,0:15:1.01:0,1,165	0/0:32,0:31:30.05:0,30,401	0/0:28,0:28:41.99:0,42,566	0/0:18,0:18:30.39:0,30,405	0/0:14,0:14:27.04:0,27,362	0/0:15,0:14:36.11:0,36,514	0/0:28,0:28:40.16:0,40,486	0/0:14,0:14:24.06:0,24,328	1/1:4,14:17:1.79:7,2,0	1/1:6,14:20:3.01:58,3,0	0/1:12,13:25:25.88:63,0,26	0/0:31,0:29:46.62:0,47,573	0/0:24,0:23:57.03:0,57,651	0/0:35,0:35:49.75:0,50,596	0/0:17,0:17:43.85:0,44,453
chr10	71735411	.	A	AAACAACAAC	2914.71	PASS	AB=0.793;AC=16;AF=0.286;AN=56;BaseQRankSum=-2.699;DP=551;FS=8.802;HRun=0;HaplotypeScore=147.4806;InbreedingCoeff=0.6129;MQ=55.86;MQ0=7;MQRankSum=-4.911;QD=15.84;ReadPosRankSum=-0.613;VQSLOD=2.0659;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:25:10.07:0,10,276	1/1:4,0:9:3.02:28,3,0	0/0:19,0:11:3.01:0,3,37	0/0:14,0:12:6.47:0,6,56	0/0:40,0:40:84:0,84,1990	0/0:22,0:22:48.16:0,48,1163	0/1:21,0:21:21.98:22,0,703	0/0:21,0:20:24.07:0,24,396	0/0:13,0:13:21.05:0,21,457	0/1:5,0:18:0.33:46,0,0	0/1:5,0:16:3.09:24,0,3	1/1:9,13:24:12.04:416,12,0	1/1:5,12:19:18.06:767,18,0	0/0:12,0:12:18.06:0,18,474	0/0:18,0:18:39.12:0,39,842	0/0:23,0:24:63.20:0,63,1575	0/0:9,0:27:12.46:0,12,27	0/1:7,0:12:6.28:6,0,117	0/0:15,0:14:27.09:0,27,547	0/0:22,0:22:45.13:0,45,1094	0/0:17,0:17:36.12:0,36,899	1/1:4,6:14:18.06:816,18,0	1/1:8,13:27:20.98:950,21,0	1/1:11,7:22:2.92:17,3,0	0/0:8,0:18:10.85:0,11,23	0/0:16,0:16:42.12:0,42,914	0/0:24,0:24:51.15:0,51,1247	0/0:18,0:18:39.12:0,39,995
chr10	71735694	.	GA	G	3899.50	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.458;DP=669;FS=3.631;HRun=1;HaplotypeScore=65.7405;InbreedingCoeff=0.9999;MQ=83.52;MQ0=0;MQRankSum=-1.520;QD=37.14;ReadPosRankSum=3.951;VQSLOD=4.2150;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.25:0,81,1268	0/0:14,0:14:42.14:0,42,671	0/0:26,0:26:78.19:0,78,1097	0/0:22,0:22:57.19:0,57,868	0/0:30,0:30:90.29:0,90,1415	0/0:19,0:19:57.18:0,57,875	0/0:36,0:36:99:0,108,1657	0/0:36,0:36:99:0,108,1664	0/0:14,0:14:42.14:0,42,671	0/0:24,0:24:69.22:0,69,1053	0/0:23,0:23:63.19:0,63,961	1/1:1,22:23:66.15:881,66,0	1/1:0,14:14:36.12:503,36,0	0/0:24,0:24:72.23:0,72,1111	0/0:28,0:28:84.26:0,84,1297	0/0:17,0:17:51.17:0,51,813	0/0:25,0:25:72.25:0,72,1145	0/0:18,0:18:54.12:0,54,810	0/0:28,0:28:84.28:0,84,1313	0/0:29,0:29:87.24:0,87,1339	0/0:25,0:25:75.24:0,75,1174	1/1:0,16:16:45.15:629,45,0	1/1:0,29:29:69.23:964,69,0	1/1:0,23:23:66.22:923,66,0	0/0:26,0:26:75.26:0,75,1198	0/0:27,0:27:81.27:0,81,1273	0/0:30,0:30:90.22:0,90,1403	0/0:15,0:15:45.15:0,45,719
chr10	71736164	.	G	GT	11578.44	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-15.005;DP=636;FS=13.413;HRun=1;HaplotypeScore=58.7453;InbreedingCoeff=0.9954;MQ=79.89;MQ0=0;MQRankSum=-0.343;QD=38.59;ReadPosRankSum=3.439;VQSLOD=4.2483;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:37:99:1483,99,0	1/1:0,14:14:36.12:540,36,0	0/0:18,0:18:45.11:0,45,553	0/0:16,0:16:33.15:0,33,528	0/0:30,0:30:87.27:0,87,1114	0/0:25,0:25:75.24:0,75,974	0/0:31,0:31:90.29:0,90,1168	0/0:20,0:20:57.17:0,57,724	0/0:13,0:13:39.11:0,39,490	1/1:1,21:22:63.16:858,63,0	1/1:0,11:11:24.08:360,24,0	1/1:1,25:26:69.23:1034,69,0	1/1:0,16:16:42.14:629,42,0	0/0:21,0:21:63.19:0,63,804	0/0:27,0:27:81.25:0,81,1036	0/0:18,0:18:54.18:0,54,701	1/1:0,48:48:99:2023,135,0	1/1:0,22:22:54.18:809,54,0	0/0:14,0:14:42.14:0,42,545	0/0:17,0:17:51.14:0,51,634	0/0:31,0:31:90.29:0,90,1169	1/1:0,25:25:63.21:944,63,0	1/1:0,20:20:54.18:809,54,0	1/1:0,33:33:78.26:1169,78,0	1/1:1,25:26:63.17:919,63,0	0/0:26,0:26:78.25:0,78,1013	0/0:24,0:24:66.21:0,66,856	0/0:5,0:5:12.04:0,12,156
chr10	71738592	.	AAAC	A	2647.40	PASS	AB=0.984;AC=22;AF=0.407;AN=54;BaseQRankSum=12.080;DP=724;FS=4.038;HRun=0;HaplotypeScore=120.8121;InbreedingCoeff=0.7933;MQ=62.94;MQ0=10;MQRankSum=-1.157;QD=8.80;ReadPosRankSum=6.179;VQSLOD=2.7192;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:1.20:1,0,69	1/1:4,6:10:8.67:119,9,0	./.	0/0:34,0:21:3.01:0,3,42	0/0:29,0:29:66.21:0,66,1160	0/0:13,0:13:20.42:0,20,315	0/0:30,0:30:14.22:0,14,867	0/0:43,0:39:36.08:0,36,529	0/0:19,0:19:33.11:0,33,620	1/1:14,13:27:36.10:464,36,0	1/1:7,20:27:58.39:723,58,0	1/1:8,0:21:11.90:84,12,0	1/1:6,0:23:29.76:210,30,0	0/0:19,0:19:39.13:0,39,725	0/0:29,1:30:38.12:0,38,1323	0/0:27,0:27:57.18:0,57,1059	1/1:8,24:32:36.12:482,36,0	0/0:9,0:22:24.08:0,24,311	0/1:29,1:30:4.04:4,0,551	0/0:35,0:35:60.20:0,60,1101	0/0:18,1:18:5.01:0,5,665	1/1:14,0:29:35.71:251,36,0	1/1:10,0:24:26.65:188,27,0	1/1:12,0:25:5.95:42,6,0	1/1:9,16:25:21.07:281,21,0	0/0:22,1:23:1.99:0,2,695	0/0:31,0:30:69.22:0,69,1267	0/0:16,0:15:33.11:0,33,574
chr10	71738620	.	A	AACAACAAC	595.79	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.587;DP=743;FS=0.000;HRun=0;HaplotypeScore=200.5862;InbreedingCoeff=0.9666;MQ=60.95;MQ0=12;MQRankSum=-3.583;QD=16.10;ReadPosRankSum=-1.394;VQSLOD=2.6859;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,15:37:23.74:689,24,0	0/0:12,0:12:25.02:0,25,385	0/0:33,0:19:39.12:0,39,505	0/0:42,0:25:42.49:0,42,678	0/0:36,0:36:99:0,99,2012	0/0:14,0:14:36.10:0,36,699	0/0:23,0:24:63.21:0,63,1444	0/0:34,0:29:64.76:0,65,994	0/0:19,0:19:57.19:0,57,1197	0/0:23,0:23:35.49:0,35,878	0/0:34,0:34:93.15:0,93,1532	0/0:16,0:16:21.07:0,21,356	0/0:19,0:19:33.10:0,33,607	0/0:19,0:19:51.17:0,51,1142	0/0:42,0:42:99:0,126,2616	0/0:29,0:29:87.26:0,87,1839	0/0:37,0:37:60.17:0,60,1010	0/0:24,0:24:31.86:0,32,268	0/0:21,0:21:54.64:0,55,1124	0/0:39,0:39:97.27:0,97,2014	0/0:26,0:25:72.24:0,72,1465	0/0:20,0:20:48.16:0,48,855	0/0:21,0:21:44.81:0,45,766	0/0:18,0:18:12.92:0,13,185	0/0:24,0:24:33.09:0,33,564	0/0:24,0:24:72.24:0,72,1500	0/0:38,0:37:99:0,108,2227	0/0:18,0:17:51.17:0,51,1112
chr10	71739347	.	TC	T	2328.12	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.746;DP=659;FS=14.708;HRun=1;HaplotypeScore=86.3951;InbreedingCoeff=0.9995;MQ=72.24;MQ0=2;MQRankSum=0.602;QD=28.05;ReadPosRankSum=1.154;VQSLOD=2.2998;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:75.26:0,75,1193	1/1:2,16:17:42:462,42,0	0/0:43,0:31:75.55:0,76,1175	0/0:48,0:36:80.35:0,80,1055	0/0:26,0:26:78.27:0,78,1236	0/0:16,0:17:44.50:0,44,738	0/0:14,0:14:39.13:0,39,620	0/0:22,1:23:26.73:0,27,945	0/0:18,0:18:54.18:0,54,850	1/1:1,13:14:38.85:466,39,0	1/1:0,16:16:45.10:531,45,0	0/0:26,0:26:78.24:0,78,1214	0/0:24,0:24:72.25:0,72,1150	0/0:34,0:34:99:0,102,1623	0/0:37,0:37:99:0,111,1749	0/0:32,0:32:96.31:0,96,1504	1/1:0,13:13:36.11:438,36,0	0/0:20,0:20:48.16:0,48,767	0/0:14,0:14:42.14:0,42,670	0/0:29,0:29:84.27:0,84,1315	0/0:18,0:19:50.86:0,51,785	0/0:16,0:16:48.16:0,48,757	0/0:18,0:18:54.15:0,54,815	0/0:28,0:28:78.16:0,78,1185	1/1:2,20:22:47.30:607,47,0	0/0:21,1:22:30.23:0,30,970	0/0:21,0:21:63.19:0,63,978	0/0:16,0:16:42.14:0,42,649
chr10	71739397	.	G	GCCTCT	2006.11	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=2.568;DP=748;FS=6.278;HRun=0;HaplotypeScore=165.1932;InbreedingCoeff=0.8535;MQ=70.48;MQ0=4;MQRankSum=-3.436;QD=10.08;ReadPosRankSum=-3.221;VQSLOD=2.0147;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,21:36:51.18:1438,51,0	0/0:18,0:18:30.09:0,30,503	0/1:47,0:27:0.51:1,0,19	0/0:78,0:49:19.44:0,19,216	0/0:18,0:18:5.07:0,5,351	0/0:20,0:20:36.11:0,36,621	0/0:21,0:21:54.09:0,54,809	0/0:28,0:28:27.03:0,27,405	0/0:26,0:26:54.15:0,54,933	0/0:22,0:22:45.12:0,45,755	0/0:23,0:23:48.02:0,48,721	1/1:14,0:14:6.89:80,7,0	1/1:20,0:20:16.83:148,17,0	0/0:34,0:33:60.17:0,60,981	0/0:37,0:37:57.18:0,57,994	0/0:33,0:33:72.20:0,72,1175	0/0:22,0:22:54.66:0,55,971	1/1:8,6:14:6.02:170,6,0	0/0:10,0:9:12.04:0,12,220	0/0:30,0:30:57.19:0,57,985	0/0:31,0:31:63.13:0,63,944	1/1:25,0:25:11.51:135,12,0	1/1:14,0:14:6.02:108,6,0	1/1:28,0:28:12.29:107,12,0	0/0:27,0:27:60.21:0,60,1076	0/0:30,0:30:54.15:0,54,853	0/0:27,0:26:66.21:0,66,1157	0/0:14,0:14:32.99:0,33,470
chr10	71744530	.	A	AAAAT	5412.53	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=1.572;DP=611;FS=0.980;HRun=0;HaplotypeScore=105.4152;InbreedingCoeff=0.9972;MQ=77.15;MQ0=0;MQRankSum=-1.454;QD=47.48;ReadPosRankSum=1.406;VQSLOD=5.5038;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:51.15:0,51,920	0/0:10,0:10:27.09:0,27,480	0/0:13,0:13:29.58:0,30,386	0/0:15,0:15:32.86:0,33,492	0/0:19,0:19:57.19:0,57,1014	0/0:20,0:20:60.19:0,60,1042	0/0:29,0:29:78.26:0,78,1383	0/0:37,0:37:93.30:0,93,1524	0/0:19,0:19:57.19:0,57,956	0/0:22,0:22:63.22:0,63,1188	0/0:19,0:19:57.18:0,57,1028	1/1:1,30:33:63.22:1656,63,0	1/1:5,22:29:57.19:1512,57,0	0/0:32,0:32:87.29:0,87,1525	0/0:26,0:26:75.23:0,75,1326	0/0:23,0:23:60.20:0,60,1085	0/0:28,0:28:84.29:0,84,1547	0/0:22,0:22:54.14:0,54,980	0/0:20,0:20:54.14:0,54,976	0/0:20,0:20:57.20:0,57,1081	0/0:6,0:6:18.04:0,18,293	1/1:3,11:17:27.08:609,27,0	1/1:2,11:14:27.08:621,27,0	1/1:3,17:21:39.13:1014,39,0	0/0:23,0:23:66.22:0,66,1179	0/0:24,0:24:66.23:0,66,1205	0/0:34,0:34:99:0,99,1837	0/0:15,0:15:45.15:0,45,854
chr10	71744687	.	AG	A	2264.29	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.767;DP=511;FS=6.435;HRun=6;HaplotypeScore=89.7926;InbreedingCoeff=0.9789;MQ=75.06;MQ0=0;MQRankSum=-11.343;QD=22.87;ReadPosRankSum=-0.854;VQSLOD=2.4767;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:39.09:416,39,0	1/1:0,5:5:12.03:129,12,0	0/0:22,0:22:60.19:0,60,761	0/0:9,0:9:26.44:0,26,310	0/0:27,0:27:75.24:0,75,986	0/0:25,0:25:66.20:0,66,853	0/0:30,0:30:75.20:0,75,953	0/0:33,0:33:81.24:0,81,1035	0/0:9,0:9:27.09:0,27,355	1/1:0,15:15:45.08:467,45,0	1/1:1,18:19:27.04:284,27,0	0/0:22,0:22:66.20:0,66,850	0/0:12,0:12:36.12:0,36,474	0/0:18,0:18:54.18:0,54,710	0/0:18,0:18:51.16:0,51,657	0/0:22,1:23:33.96:0,34,797	1/1:0,16:16:45.11:474,45,0	1/1:0,10:10:24.02:245,24,0	0/0:13,1:14:9.88:0,10,477	0/0:21,0:21:57.19:0,57,749	0/0:30,0:30:87.21:0,87,1093	0/0:13,0:13:36.12:0,36,473	0/0:14,0:14:42.13:0,42,542	0/0:24,0:24:63.16:0,63,808	1/1:1,17:18:42.10:447,42,0	0/0:27,0:27:81.26:0,81,1065	0/0:17,0:17:51.17:0,51,670	0/0:4,0:4:12.04:0,12,158
chr10	71747037	.	G	GT	2351.53	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-10.430;DP=406;FS=0.471;HRun=8;HaplotypeScore=40.0032;InbreedingCoeff=0.9046;MQ=76.90;MQ0=0;MQRankSum=-3.162;QD=24.75;ReadPosRankSum=-0.223;VQSLOD=3.6917;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:42.01:0,42,384	1/1:0,6:6:15.04:173,15,0	0/0:16,0:15:26.99:0,27,247	0/1:4,0:4:1.48:1,0,46	0/0:23,0:23:57.01:0,57,517	0/0:15,0:15:42.02:0,42,384	0/0:8,0:8:21:0,21,192	0/0:20,0:20:45.02:0,45,412	0/0:5,0:5:15.01:0,15,137	1/1:2,19:21:60.18:691,60,0	1/1:1,25:26:69.08:752,69,0	0/0:14,0:14:42.02:0,42,384	0/0:16,0:16:45.02:0,45,412	0/0:5,0:5:15.01:0,15,137	0/0:16,0:16:38.99:0,39,351	0/0:9,0:9:24.01:0,24,220	1/1:6,13:19:33.10:381,33,0	0/0:19,0:19:42.01:0,42,384	0/0:15,0:15:19.67:0,20,310	0/0:19,0:19:47.99:0,48,428	0/0:8,0:8:24.01:0,24,220	0/0:3,0:3:9:0,9,82	0/0:20,0:20:60.03:0,60,549	0/0:7,0:7:20.99:0,21,186	1/1:3,16:19:23.94:527,24,0	0/0:17,0:17:42.01:0,42,384	0/0:22,0:22:63.03:0,63,576	0/0:17,0:17:48.02:0,48,439
chr10	71747436	.	C	CGTGTGT	1430.47	PASS	AB=1.000;AC=25;AF=0.481;AN=52;BaseQRankSum=6.029;DP=663;FS=2.258;HRun=0;HaplotypeScore=173.1462;InbreedingCoeff=0.5837;MQ=56.04;MQ0=11;MQRankSum=-6.015;QD=4.54;ReadPosRankSum=-1.701;VQSLOD=2.3259;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:41:2.99:23,3,0	1/1:10,0:10:8.96:102,9,0	./.	./.	0/0:17,0:16:33.09:0,33,608	0/0:15,0:17:27.98:0,28,529	0/0:39,0:40:56.13:0,56,1083	0/0:26,0:24:23.86:0,24,330	0/0:13,0:14:21.07:0,21,383	0/1:19,0:18:2.27:157,0,2	1/1:18,1:19:2.97:24,3,0	1/1:15,15:32:10.80:197,11,0	1/1:8,12:22:8.46:249,8,0	0/0:30,0:33:59.20:0,59,1118	0/0:16,0:21:30.10:0,30,573	0/0:11,0:14:21.07:0,21,390	1/1:25,0:25:30.07:384,30,0	1/1:22,0:21:0.35:154,0,0	0/1:22,0:23:28.95:29,0,99	0/0:18,0:20:27.06:0,27,491	0/0:64,0:70:97.17:0,97,1809	1/1:5,10:16:2.96:38,3,0	1/1:5,5:13:2.96:60,3,0	1/1:16,7:26:0.41:1,0,0	1/1:28,0:28:11.93:158,12,0	0/1:18,0:18:30.65:31,0,300	0/0:9,0:10:18.06:0,18,326	0/0:6,0:6:9.03:0,9,185
chr10	71747460	.	T	TGTGC	1483.06	PASS	AB=0.863;AC=14;AF=0.250;AN=56;BaseQRankSum=8.566;DP=654;FS=4.508;HRun=0;HaplotypeScore=152.7807;InbreedingCoeff=0.0421;MQ=50.94;MQ0=14;MQRankSum=-4.216;QD=5.49;ReadPosRankSum=2.923;VQSLOD=2.6093;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:39:28.12:44,0,28	0/1:2,8:11:7.57:151,0,8	0/0:11,0:5:8.97:0,9,105	0/0:21,0:5:2.90:0,3,16	0/0:22,0:22:57.06:0,57,784	0/0:20,0:20:45:0,45,652	0/0:33,0:33:78.03:0,78,1189	0/0:21,0:19:48:0,48,598	0/0:14,0:14:36.51:0,37,506	0/1:7,13:19:53.65:275,0,54	0/1:5,13:20:4.22:17,0,4	0/1:34,0:32:68.01:68,0,146	0/1:23,0:23:58.04:58,0,123	0/0:36,0:36:91.71:0,92,1284	0/0:23,0:23:51.07:0,51,695	0/0:16,0:16:30.06:0,30,426	1/1:8,16:28:10.01:694,10,0	0/1:20,0:19:87.04:87,0,124	0/0:18,0:18:49.05:0,49,428	0/0:27,0:27:62.87:0,63,752	0/0:78,0:74:99:0,171,2264	0/1:15,0:15:33.69:34,0,63	0/1:12,0:12:38.60:39,0,40	0/0:28,0:28:19.77:0,20,167	1/1:3,18:27:6.57:150,7,0	0/1:18,2:20:27.75:28,0,524	0/0:12,0:12:36.02:0,36,460	0/0:4,0:4:9.03:0,9,170
chr10	71747817	.	CT	C	1785.27	PASS	AB=0.934;AC=16;AF=0.286;AN=56;BaseQRankSum=5.244;DP=600;FS=17.616;HRun=12;HaplotypeScore=74.0229;InbreedingCoeff=0.7576;MQ=68.31;MQ0=0;MQRankSum=0.592;QD=9.97;ReadPosRankSum=1.999;VQSLOD=1.1822;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:16:26.88:209,27,0	1/1:3,10:13:26.89:209,27,0	0/0:16,0:15:8.26:0,8,88	0/1:12,0:11:20.79:21,0,23	0/0:29,0:31:50.84:0,51,596	0/0:34,0:33:87.09:0,87,858	0/0:21,2:23:37.27:0,37,526	0/1:28,5:33:19.40:19,0,542	0/0:27,0:27:69.08:0,69,671	1/1:4,18:21:50.58:385,51,0	1/1:6,16:22:10.09:236,10,0	0/0:3,0:22:51.33:0,51,273	0/0:3,0:18:25.43:0,25,128	0/0:16,0:16:36.04:0,36,346	0/0:27,0:27:63.11:0,63,630	0/0:16,2:18:1.63:0,2,380	1/1:3,16:20:25.38:370,25,0	1/1:3,15:19:10.45:254,10,0	0/0:27,1:28:39.97:0,40,607	0/0:23,2:25:20.92:0,21,501	0/0:15,0:15:33.05:0,33,326	0/0:4,0:26:60.60:0,61,352	0/0:7,0:27:46.33:0,46,254	0/0:5,0:14:25.90:0,26,161	1/1:5,17:22:35.84:279,36,0	0/0:17,0:18:38.90:0,39,375	0/0:29,0:29:69.10:0,69,680	0/0:6,0:6:9.02:0,9,91
chr10	71748756	.	GTCCTT	G	1541.87	PASS	AB=0.920;AC=28;AF=0.583;AN=48;BaseQRankSum=4.342;DP=781;FS=16.010;HRun=0;HaplotypeScore=153.1420;InbreedingCoeff=0.6882;MQ=66.39;MQ0=38;MQRankSum=-1.445;QD=3.95;ReadPosRankSum=1.207;VQSLOD=2.0127;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:21:3.03:3,0,49	0/0:13,0:12:2.97:0,3,20	./.	./.	1/1:35,0:35:12.01:130,12,0	1/1:16,10:26:6.02:103,6,0	./.	./.	1/1:20,0:20:9:96,9,0	1/1:28,0:28:23.78:196,24,0	1/1:18,0:18:10.09:62,10,0	0/0:32,0:32:39.11:0,39,721	0/0:28,0:28:17.24:0,17,146	1/1:16,0:16:3.01:48,3,0	1/1:26,6:32:2.93:51,3,0	0/0:25,0:25:18.05:0,18,312	1/1:31,0:31:23.89:202,24,0	0/0:23,0:23:18.44:0,18,120	1/1:25,0:25:3.01:41,3,0	0/0:29,0:29:36.06:0,36,632	1/1:29,0:30:15.02:182,15,0	0/0:38,0:38:39.13:0,39,836	0/0:20,0:20:30.06:0,30,530	0/0:29,0:29:41.11:0,41,803	1/1:13,0:13:8.21:58,8,0	1/1:38,0:38:21.05:297,21,0	1/1:21,12:33:12.04:207,12,0	0/1:17,4:18:13.02:46,0,13
chr10	71748822	.	CCCTTT	C	4900.02	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=7.358;DP=753;FS=1.647;HRun=0;HaplotypeScore=134.1325;InbreedingCoeff=0.6224;MQ=55.20;MQ0=39;MQRankSum=-0.010;QD=20.00;ReadPosRankSum=1.052;VQSLOD=4.5481;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:17:62.97:206,0,63	1/1:11,0:10:30.03:463,30,0	0/0:31,0:6:14.92:0,15,210	0/1:66,0:15:5.70:6,0,149	0/0:30,0:30:71.89:0,72,1082	0/0:25,0:25:31.96:0,32,669	0/0:23,0:18:50.94:0,51,735	0/0:29,0:25:62.85:0,63,789	0/0:17,0:17:45.84:0,46,659	1/1:26,0:25:72.19:1124,72,0	1/1:0,23:23:57.04:663,57,0	0/0:40,0:40:99:0,117,2017	0/1:21,0:21:24.93:25,0,630	0/0:13,0:12:31.33:0,31,488	0/0:30,0:30:62.55:0,63,1214	0/0:24,0:24:69.23:0,69,1330	1/1:27,0:26:47.01:978,47,0	0/1:27,0:26:11.94:567,0,12	0/0:20,0:15:39.05:0,39,579	0/0:39,0:38:99:0,108,1762	0/0:18,0:17:40.86:0,41,492	0/0:38,0:38:99:0,108,1861	0/0:31,0:31:87.19:0,87,1545	0/0:35,0:35:98.86:0,99,1785	1/1:22,0:22:54.11:868,54,0	0/0:28,0:28:64.89:0,65,1187	0/0:28,0:28:37.75:0,38,788	0/0:9,0:6:5.37:0,5,91
chr10	71748874	.	TTTTCC	T	891.24	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.955;DP=856;FS=14.825;HRun=0;HaplotypeScore=161.3763;InbreedingCoeff=0.9376;MQ=59.82;MQ0=14;MQRankSum=-4.980;QD=16.20;ReadPosRankSum=2.198;VQSLOD=2.6129;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,17:26:33.06:595,33,0	0/0:8,0:8:21.06:0,21,459	0/0:63,0:23:18.01:0,18,409	0/0:99,0:27:7.29:0,7,261	0/0:26,0:26:63.19:0,63,1512	0/0:20,0:20:57.19:0,57,1469	0/0:25,0:25:69.22:0,69,1563	0/0:27,0:27:54.17:0,54,1110	0/0:22,0:22:57.20:0,57,1595	0/0:28,0:28:69.24:0,69,1778	0/0:28,0:28:69.08:0,69,1623	0/0:38,0:38:96.33:0,96,2468	0/0:26,0:26:69.24:0,69,1820	0/0:21,0:21:57.11:0,57,1394	0/0:36,0:36:93.31:0,93,2490	0/0:35,0:35:93.29:0,93,2274	0/0:36,0:35:84.29:0,84,2099	1/1:11,18:28:23.91:417,24,0	0/0:20,0:19:48.16:0,48,1108	0/0:33,0:33:75.24:0,75,1831	0/0:15,0:15:39.13:0,39,1004	0/0:26,0:26:75.23:0,75,1943	0/0:33,0:33:93.29:0,93,2434	0/0:36,0:36:85.49:0,85,1891	0/0:30,0:30:52.44:0,52,1580	0/0:37,0:37:99:0,102,2596	0/0:27,0:27:63.20:0,63,1523	0/0:5,0:5:12.04:0,12,338
chr10	71748921	.	C	CT	3624.52	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-12.223;DP=722;FS=2.882;HRun=7;HaplotypeScore=76.7935;InbreedingCoeff=0.9595;MQ=69.82;MQ0=4;MQRankSum=0.740;QD=29.95;ReadPosRankSum=0.870;VQSLOD=4.0702;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:42.01:0,42,395	1/1:0,8:8:21.06:254,21,0	0/0:25,0:20:28.66:0,29,305	0/0:26,0:16:6.30:0,6,179	0/0:25,0:25:72.11:0,72,694	0/0:24,0:23:66.09:0,66,631	0/0:18,0:18:50.85:0,51,483	0/0:18,0:18:39.04:0,39,377	0/0:29,0:29:69.10:0,69,666	1/1:3,27:30:81.25:978,81,0	1/1:1,20:21:57.09:653,57,0	0/0:30,0:30:78.11:0,78,749	0/0:38,0:38:99:0,99,956	0/0:29,0:29:78.11:0,78,753	0/0:28,0:28:72.11:0,72,695	0/0:27,0:27:72.10:0,72,690	1/1:0,38:38:90.28:1087,90,0	0/0:29,0:29:57.08:0,57,550	0/0:28,0:27:54.07:0,54,517	0/0:35,0:35:90.12:0,90,864	0/0:9,0:9:9.01:0,9,87	0/0:26,0:26:72.10:0,72,689	0/0:25,0:25:69.08:0,69,656	0/0:35,0:35:90.09:0,90,859	1/1:2,22:24:54.64:653,55,0	0/0:31,0:32:83.15:0,83,785	0/0:36,0:36:99:0,99,943	0/0:6,0:6:15.02:0,15,145
chr10	71749526	.	GTTTCTC	G	1230.33	PASS	AB=0.937;AC=15;AF=0.268;AN=56;BaseQRankSum=9.894;DP=580;FS=1.586;HRun=0;HaplotypeScore=149.3228;InbreedingCoeff=0.3451;MQ=54.49;MQ0=12;MQRankSum=-2.441;QD=6.25;ReadPosRankSum=-0.862;VQSLOD=2.7440;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:28.46:0,28,218	1/1:5,3:8:5.53:59,6,0	0/0:13,0:9:4.09:0,4,203	0/0:11,0:10:24.04:0,24,258	0/0:20,0:20:45.86:0,46,568	0/0:34,0:33:61.16:0,61,822	0/0:26,0:25:63.74:0,64,600	0/0:35,0:33:55.84:0,56,714	0/0:19,0:19:49.32:0,49,784	1/1:3,17:21:11.82:565,12,0	1/1:10,0:11:20.36:181,20,0	0/0:24,0:24:56.04:0,56,1038	0/0:26,0:26:52.88:0,53,749	0/0:21,0:21:46.62:0,47,589	0/0:20,0:19:39.15:0,39,365	0/0:21,0:22:47.20:0,47,541	0/1:3,0:10:4.02:19,0,4	0/1:12,0:11:18.68:19,0,112	0/1:15,0:14:45.22:45,0,178	0/0:20,0:20:17.25:0,17,323	0/1:25,0:24:97.51:98,0,284	0/0:19,0:19:42.79:0,43,483	0/0:21,0:21:49.29:0,49,674	0/0:34,0:33:70.50:0,70,1195	1/1:19,0:23:47.14:351,47,0	0/1:21,0:21:21.64:22,0,348	0/1:32,0:33:28.99:29,0,262	0/1:18,0:18:18.23:18,0,300
chr10	71749528	.	TTCTCTC	T	1002.91	PASS	AB=0.882;AC=16;AF=0.308;AN=52;BaseQRankSum=3.435;DP=580;FS=12.137;HRun=0;HaplotypeScore=149.9077;InbreedingCoeff=0.4068;MQ=53.32;MQ0=17;MQRankSum=-0.957;QD=5.31;ReadPosRankSum=0.359;VQSLOD=2.0888;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,3:16:3.15:0,3,12	0/0:7,0:8:3.45:0,3,22	./.	./.	0/0:19,0:19:11.73:0,12,311	0/0:33,0:32:24.54:0,25,475	0/0:26,0:25:5.25:0,5,102	0/0:35,0:31:2.98:0,3,21	0/0:18,0:18:30.08:0,30,624	1/1:20,0:21:20.29:295,20,0	1/1:11,0:11:3.16:43,3,0	0/0:24,0:24:35.66:0,36,686	0/0:25,0:25:21.53:0,22,375	0/0:21,0:21:11.71:0,12,262	0/0:15,0:22:9.97:0,10,138	0/0:18,1:21:7.04:0,7,283	1/1:10,0:10:1.25:3,1,0	1/1:8,4:11:6.01:72,6,0	1/1:12,4:15:9.03:150,9,0	1/1:11,1:20:2.85:54,3,0	0/1:25,0:24:1.30:218,0,1	0/0:19,0:19:8.21:0,8,174	0/0:20,0:20:22.91:0,23,335	0/0:35,0:34:51.13:0,51,1005	0/0:16,0:22:2.49:0,2,9	0/1:20,1:21:16.34:159,0,16	0/1:13,18:33:9.08:107,0,9	0/1:18,1:18:54.86:55,0,61
chr10	71749571	.	TCA	T	329.75	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=1.968;DP=609;FS=5.651;HRun=0;HaplotypeScore=125.2295;InbreedingCoeff=0.0830;MQ=49.59;MQ0=27;MQRankSum=3.779;QD=2.13;ReadPosRankSum=0.119;VQSLOD=1.8671;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:14.92:0,15,115	0/1:12,0:12:3.79:4,0,114	0/0:14,0:1:2.96:0,3,19	0/0:15,0:3:6.34:0,6,36	0/0:22,0:21:17.81:0,18,337	0/0:31,0:30:38.95:0,39,337	0/0:32,0:28:42.96:0,43,335	0/0:27,0:24:44.89:0,45,376	0/0:27,0:27:48.05:0,48,534	0/0:34,0:33:57.60:0,58,478	0/0:13,0:13:16.89:0,17,145	0/0:20,0:19:6.91:0,7,204	0/1:22,0:22:3.45:3,0,289	0/0:20,0:20:7.65:0,8,203	0/1:22,0:21:4.10:4,0,203	0/0:17,0:17:27.67:0,28,292	0/0:11,0:10:17.85:0,18,136	0/0:11,0:10:23.83:0,24,179	0/0:17,0:16:18:0,18,172	0/0:27,0:26:38.94:0,39,320	0/1:22,0:20:36.85:37,0,179	0/1:20,0:20:29.41:29,0,127	0/1:23,0:23:12.28:12,0,210	0/0:37,0:35:14.94:0,15,546	0/0:21,0:21:8.35:0,8,239	1/1:11,14:25:41.26:307,41,0	0/0:39,0:38:55.29:0,55,428	0/1:8,0:9:10.83:67,0,11
chr10	71750638	.	G	GT	3958.30	PASS	AB=0.576;AC=13;AF=0.232;AN=56;BaseQRankSum=-4.820;DP=686;FS=4.132;HRun=10;HaplotypeScore=71.7327;InbreedingCoeff=0.9298;MQ=75.27;MQ0=0;MQRankSum=-2.175;QD=23.42;ReadPosRankSum=0.502;VQSLOD=4.4252;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:31:81.20:862,81,0	1/1:2,13:15:36.09:384,36,0	0/0:15,0:18:9.30:0,9,152	0/0:14,0:15:19.31:0,19,133	0/0:27,0:27:71.91:0,72,590	0/0:25,1:29:38.01:0,38,497	0/0:11,0:11:20.97:0,21,172	0/0:30,1:33:50.39:0,50,593	0/0:21,0:21:56.90:0,57,464	1/1:6,23:31:46.79:710,47,0	1/1:4,14:19:23.18:393,23,0	0/0:32,1:33:47.93:0,48,587	0/0:32,0:33:82.83:0,83,664	0/0:18,0:19:25.76:0,26,351	0/0:25,1:28:37.96:0,38,491	0/0:25,0:27:72.98:0,73,575	1/1:3,27:31:80.87:828,81,0	0/1:5,14:19:0.49:342,0,0	0/0:17,0:17:35.94:0,36,295	0/0:20,0:20:47.87:0,48,387	0/0:31,0:32:85.89:0,86,690	0/0:20,0:20:50.93:0,51,418	0/0:26,0:26:68.91:0,69,566	0/0:41,0:41:59.48:0,59,777	1/1:5,16:22:24.56:440,25,0	0/0:32,2:34:51.85:0,52,626	0/0:26,2:28:42.79:0,43,546	0/0:5,0:5:11.99:0,12,99
chr10	71751142	.	TG	T	3926.01	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.114;DP=644;FS=2.359;HRun=2;HaplotypeScore=63.1539;InbreedingCoeff=0.9938;MQ=76.04;MQ0=1;MQRankSum=-0.694;QD=36.02;ReadPosRankSum=4.213;VQSLOD=4.2626;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,153,2258	0/0:7,0:7:18.05:0,18,251	0/0:17,0:16:45.15:0,45,663	0/0:12,1:12:15.41:0,15,455	0/0:20,0:20:60.20:0,60,895	0/0:23,0:23:69.23:0,69,1025	0/0:15,0:15:45.15:0,45,673	0/0:26,0:26:72.24:0,72,1056	0/0:15,0:15:45.15:0,45,666	0/0:29,0:29:84.28:0,84,1252	0/0:18,0:18:54.18:0,54,799	1/1:0,23:23:69.22:896,69,0	1/1:1,23:24:66.21:852,66,0	0/0:21,0:21:63.20:0,63,908	0/0:22,0:22:66.22:0,66,985	0/0:26,0:26:78.24:0,78,1125	0/0:32,0:32:96.31:0,96,1418	0/0:32,0:32:96.32:0,96,1431	0/0:20,0:20:60.13:0,60,867	0/0:35,0:35:99:0,105,1536	0/0:25,0:25:72.23:0,72,1058	1/1:1,18:19:57.19:739,57,0	1/1:0,25:25:60.16:778,60,0	1/1:0,18:18:51.17:662,51,0	0/0:32,0:32:96.32:0,96,1415	0/0:21,0:21:63.20:0,63,926	0/0:27,0:27:81.27:0,81,1213	0/0:8,0:8:21.04:0,21,274
chr10	71752102	.	AC	A	3190.46	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.159;DP=543;FS=0.395;HRun=6;HaplotypeScore=75.9279;InbreedingCoeff=0.9953;MQ=76.69;MQ0=0;MQRankSum=-7.625;QD=25.52;ReadPosRankSum=1.105;VQSLOD=3.8385;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,30:35:87.18:922,87,0	1/1:0,5:5:15.04:161,15,0	0/0:17,0:17:34.88:0,35,449	0/0:23,0:23:46.09:0,46,504	0/0:22,0:22:63.20:0,63,823	0/0:25,0:25:66.21:0,66,859	0/0:20,0:20:60.17:0,60,770	0/0:20,0:20:54.17:0,54,694	0/0:14,0:14:39.11:0,39,495	1/1:1,15:16:48.12:513,48,0	1/1:1,15:16:44.70:482,45,0	0/0:20,0:20:60.17:0,60,761	0/0:18,0:18:48.16:0,48,629	0/0:20,0:20:60.20:0,60,788	0/0:19,0:19:54.17:0,54,703	0/0:11,0:11:33.08:0,33,405	1/1:4,20:23:54.13:582,54,0	1/1:1,10:11:27.07:290,27,0	0/0:19,0:19:48.10:0,48,568	0/0:21,0:21:63.19:0,63,814	0/0:27,0:26:75.17:0,75,910	0/0:19,0:19:51.15:0,51,655	0/0:19,0:19:51.17:0,51,669	0/0:23,0:23:51.09:0,51,636	1/1:1,16:17:42.05:438,42,0	0/0:28,0:28:60.04:0,60,1010	0/0:27,0:27:75.24:0,75,976	0/0:6,0:6:17.97:0,18,214
chr10	71752146	.	GACACACACACACACAC	G	1167.47	PASS	AB=0.833;AC=11;AF=0.204;AN=54;BaseQRankSum=5.313;DP=425;FS=0.000;HRun=0;HaplotypeScore=185.8357;InbreedingCoeff=0.8240;MQ=62.87;MQ0=5;MQRankSum=-4.450;QD=27.80;ReadPosRankSum=0.709;VQSLOD=2.8007;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:3.01:49,3,0	1/1:5,0:5:6.01:147,6,0	0/0:19,0:12:26.62:0,27,1303	0/0:14,0:8:21.07:0,21,1076	0/0:19,0:18:51.18:0,51,3672	0/0:24,0:23:66.23:0,66,4385	0/0:20,0:20:57.18:0,57,3881	0/0:23,0:23:63.19:0,63,3824	0/0:17,0:17:42.13:0,42,2631	1/1:6,1:7:6.02:240,6,0	0/1:4,1:5:0:0,0,0	0/0:22,0:22:47.51:0,48,3191	0/0:15,0:15:39.11:0,39,2785	0/0:24,0:24:72.25:0,72,4858	0/0:25,0:25:72.22:0,72,4684	0/0:14,0:14:42.14:0,42,2861	1/1:9,2:11:21.04:759,21,0	1/1:3,0:3:3.01:116,3,0	0/0:17,0:17:48.16:0,48,3051	0/0:11,0:11:27.56:0,28,1843	0/0:20,0:18:45.14:0,45,2689	0/0:10,0:10:30.10:0,30,2059	0/0:17,0:17:36.12:0,36,2632	0/0:19,0:19:39.13:0,39,2542	./.	0/0:17,0:17:48.16:0,48,3203	0/0:23,0:23:63.19:0,63,4138	0/0:8,0:8:24.08:0,24,1485
chr10	71752148	.	CACACACACACACACACATATATATAT	C	1935.52	PASS	AB=0.714;AC=11;AF=0.204;AN=54;BaseQRankSum=5.178;DP=438;FS=0.000;HRun=0;HaplotypeScore=271.7662;InbreedingCoeff=0.8244;MQ=62.34;MQ0=6;MQRankSum=-4.728;QD=46.08;ReadPosRankSum=0.923;VQSLOD=2.3211;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:11:3.01:49,3,0	1/1:4,1:5:6.01:236,6,0	0/0:18,0:11:28.84:0,29,1425	0/0:14,0:8:21.07:0,21,1168	0/0:20,0:19:54.19:0,54,5845	0/0:25,0:24:69.24:0,69,6537	0/0:21,0:21:57.18:0,57,5279	0/0:22,0:22:66.20:0,66,4924	0/0:16,0:16:42.13:0,42,3731	1/1:6,1:7:6.02:306,6,0	0/1:3,0:5:0:0,0,0	0/0:22,0:22:48.04:0,48,4394	0/0:14,0:14:39.11:0,39,3961	0/0:26,0:26:78.27:0,78,7404	0/0:26,0:25:72.22:0,72,7013	0/0:16,0:16:48.16:0,48,4894	1/1:5,3:11:21.04:1274,21,0	1/1:2,1:3:3.01:213,3,0	0/0:17,0:17:51.17:0,51,4289	0/0:14,0:14:37.68:0,38,3615	0/0:20,0:18:45.14:0,45,4097	0/0:11,0:11:30.10:0,30,2905	0/0:16,0:16:36.12:0,36,3791	0/0:21,0:21:39.13:0,39,3624	./.	0/0:18,0:18:54.18:0,54,5273	0/0:26,0:26:78.25:0,78,7773	0/0:8,0:8:24.08:0,24,2161
chr10	71752177	.	ATG	A	388.67	PASS	AB=0.955;AC=16;AF=0.333;AN=48;BaseQRankSum=3.022;DP=465;FS=3.864;HRun=0;HaplotypeScore=89.2952;InbreedingCoeff=0.1209;MQ=52.37;MQ0=14;MQRankSum=2.655;QD=1.79;ReadPosRankSum=0.214;VQSLOD=1.5698;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:6,0:5:0:0,0,0	./.	./.	0/0:29,0:27:0.32:0,0,430	0/1:20,0:17:41.68:42,0,157	0/0:20,0:20:24.04:0,24,302	0/1:21,0:20:12.78:13,0,14	0/0:17,0:17:9.02:0,9,112	0/0:18,0:18:33.59:0,34,206	./.	1/1:7,10:18:9.02:98,9,0	1/1:11,0:11:9.01:86,9,0	0/0:25,0:25:20.22:0,20,231	0/0:20,0:19:3.39:0,3,349	0/1:15,0:15:25.35:25,0,179	0/0:17,0:16:4.82:0,5,18	0/0:4,0:3:2.88:0,3,15	0/1:22,0:21:19.33:19,0,83	0/1:24,0:24:14.95:15,0,392	0/0:29,0:26:8.42:0,8,302	1/1:7,8:15:3.01:32,3,0	0/1:9,1:21:12.35:52,0,12	1/1:6,18:24:14.93:147,15,0	0/0:18,0:17:5.83:0,6,37	0/1:20,0:19:3.30:3,0,88	0/0:27,0:27:3.54:0,4,491	0/0:8,0:7:5.98:0,6,46
chr10	71754283	.	A	ATGTG	961.77	PASS	AB=0.940;AC=17;AF=0.327;AN=52;BaseQRankSum=0.957;DP=801;FS=6.203;HRun=0;HaplotypeScore=135.4425;InbreedingCoeff=0.1261;MQ=58.56;MQ0=12;MQRankSum=0.403;QD=2.69;ReadPosRankSum=-0.882;VQSLOD=1.7751;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:41:6.91:7,0,101	0/1:9,0:9:7.15:7,0,53	./.	./.	0/0:23,0:22:11.11:0,11,350	0/0:28,0:28:13.88:0,14,237	0/1:34,0:35:1.87:2,0,177	1/1:26,0:22:0.89:2,1,0	0/1:21,0:22:47.03:47,0,145	0/0:32,0:32:4.04:0,4,274	0/0:22,0:23:5.90:0,6,204	1/1:15,17:33:13.35:285,13,0	0/1:23,2:27:23.42:304,0,23	0/0:26,0:27:27.31:0,27,295	0/0:32,0:32:21.42:0,21,281	0/0:31,0:30:45.07:0,45,639	0/0:28,0:37:21.13:0,21,196	0/1:15,0:25:25.31:25,0,107	0/0:18,0:20:18.04:0,18,215	0/0:20,0:20:21.12:0,21,189	0/0:69,0:75:23.92:0,24,342	1/1:27,0:27:8.61:64,9,0	1/1:14,0:14:6.02:116,6,0	0/1:26,16:45:59.03:218,0,59	0/0:20,0:22:17.72:0,18,197	0/1:23,0:26:10.94:11,0,149	0/1:20,0:23:27.13:27,0,219	0/0:13,0:14:18.48:0,18,196
chr10	71754728	.	GCA	G	654.58	PASS	AB=0.882;AC=23;AF=0.479;AN=48;BaseQRankSum=2.907;DP=379;FS=1.723;HRun=0;HaplotypeScore=69.3991;InbreedingCoeff=0.0703;MQ=58.31;MQ0=4;MQRankSum=-0.262;QD=3.04;ReadPosRankSum=1.396;VQSLOD=1.9218;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:23:5.68:28,6,0	0/0:3,0:7:8.05:0,8,74	./.	./.	0/1:14,2:16:17.58:18,0,103	0/0:12,0:12:8.91:0,9,131	0/1:13,4:17:32.22:85,0,32	./.	0/0:8,0:7:3.01:0,3,30	0/0:18,0:17:21.06:0,21,256	0/0:11,0:14:3.68:0,4,67	1/1:6,3:9:3.01:32,3,0	1/1:6,4:11:11.86:110,12,0	0/1:9,0:10:23.20:23,0,76	0/1:9,2:11:11.17:11,0,243	0/1:11,3:14:15.91:16,0,242	0/0:18,0:26:21.48:0,21,196	1/1:9,0:12:5.68:28,6,0	0/0:8,0:8:3:0,3,26	0/1:10,0:9:8.35:8,0,138	./.	1/1:8,2:10:9.02:96,9,0	1/1:10,6:16:11.85:111,12,0	1/1:18,8:26:15.03:161,15,0	0/1:7,1:9:31.36:31,0,84	0/0:10,0:9:6.89:0,7,71	0/1:9,2:11:14.18:14,0,199	0/1:10,0:10:40.47:40,0,103
chr10	71754855	.	TA	T	1884.24	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=11.980;DP=425;FS=1.414;HRun=12;HaplotypeScore=60.4040;InbreedingCoeff=0.8787;MQ=70.25;MQ0=0;MQRankSum=-1.099;QD=8.97;ReadPosRankSum=2.259;VQSLOD=2.6883;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,26:32:62.24:486,62,0	1/1:1,0:6:10.18:30,10,0	0/1:8,0:7:3.02:3,0,44	0/0:11,0:9:6.22:0,6,67	0/0:22,2:24:27.84:0,28,449	0/0:13,0:13:29.07:0,29,273	0/0:13,0:14:32.98:0,33,303	0/0:21,0:21:45.07:0,45,445	0/0:12,0:12:30.02:0,30,289	1/1:3,0:17:22.96:73,23,0	1/1:5,0:24:34.61:100,35,0	1/1:1,8:9:14.85:116,15,0	1/1:3,11:14:32.85:255,33,0	0/0:9,0:9:24.04:0,24,238	0/0:8,0:8:0:0,0,162	0/0:13,1:15:15.01:0,15,366	1/1:5,0:27:40.72:118,41,0	1/1:1,13:14:35.60:264,36,0	0/0:22,2:24:18.82:0,19,352	0/0:16,1:17:9.77:0,10,260	0/0:4,0:5:14.86:0,15,136	1/1:1,9:10:20.86:158,21,0	1/1:2,11:14:28.92:215,29,0	1/1:0,10:10:23.91:186,24,0	1/1:2,0:25:34.62:100,35,0	0/0:15,0:16:26.19:0,26,294	0/0:18,0:18:51.05:0,51,501	0/0:7,0:8:23.88:0,24,227
chr10	71755787	.	GA	G	3755.52	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.952;DP=631;FS=0.000;HRun=9;HaplotypeScore=62.8545;InbreedingCoeff=0.9940;MQ=73.19;MQ0=1;MQRankSum=-2.034;QD=22.35;ReadPosRankSum=3.501;VQSLOD=4.4061;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:33:75.03:686,75,0	1/1:2,5:7:15:137,15,0	0/0:30,0:22:45.16:0,45,512	0/0:18,0:14:29.86:0,30,305	0/0:33,0:33:96.27:0,96,1097	0/0:25,0:25:72.12:0,72,803	0/0:19,0:19:51.14:0,51,578	0/0:32,0:32:69.19:0,69,781	0/0:23,0:23:57.17:0,57,657	1/1:1,22:23:66.02:600,66,0	1/1:1,23:24:63.03:576,63,0	0/0:26,0:27:78.04:0,78,861	0/0:22,0:22:57.15:0,57,639	0/0:14,0:14:36.10:0,36,406	0/0:20,0:20:48.14:0,48,553	0/0:17,0:17:42.09:0,42,462	1/1:6,26:32:78.04:714,78,0	1/1:2,30:32:75.04:686,75,0	0/0:16,0:18:50.82:0,51,548	0/0:21,0:21:54.15:0,54,614	0/0:15,0:15:45.12:0,45,509	0/0:23,0:23:66.17:0,66,744	0/0:26,0:28:71.80:0,72,811	0/0:18,0:18:51.15:0,51,587	1/1:4,13:17:39.02:356,39,0	0/0:22,1:23:35.67:0,36,634	0/0:31,0:31:87.22:0,87,979	0/0:6,0:6:15.04:0,15,173
chr10	71759944	.	CT	C	3604.93	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.221;DP=583;FS=3.612;HRun=3;HaplotypeScore=61.7214;InbreedingCoeff=0.9962;MQ=73.94;MQ0=0;MQRankSum=0.807;QD=35.34;ReadPosRankSum=0.720;VQSLOD=4.2719;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.18:0,63,863	1/1:0,14:14:39.12:483,39,0	0/0:21,0:19:15.65:0,16,619	0/0:23,0:21:57.16:0,57,767	0/0:28,0:28:84.26:0,84,1171	0/0:25,0:25:72.22:0,72,1003	0/0:9,0:9:24.08:0,24,342	0/0:26,0:26:75.24:0,75,1058	0/0:16,0:16:45.15:0,45,648	1/1:0,27:27:78.24:967,78,0	1/1:0,15:15:42.13:521,42,0	0/0:18,0:18:51.17:0,51,735	0/0:13,0:13:39.13:0,39,562	0/0:27,0:27:78.26:0,78,1120	0/0:23,0:23:69.21:0,69,957	0/0:21,0:21:63.21:0,63,907	1/1:0,22:22:63.20:780,63,0	0/0:17,0:17:48.16:0,48,691	0/0:20,0:20:57.18:0,57,803	0/0:22,0:22:66.21:0,66,921	0/0:24,0:24:69.23:0,69,989	0/0:24,0:24:63.21:0,63,907	0/0:22,0:22:66.22:0,66,936	0/0:14,0:14:42.13:0,42,587	1/1:0,24:24:69.22:855,69,0	0/0:24,0:24:69.23:0,69,982	0/0:29,0:29:87.25:0,87,1185	0/0:11,0:11:33.10:0,33,459
chr10	71760055	.	G	GCC	207.55	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.450;DP=550;FS=7.572;HRun=9;HaplotypeScore=75.7953;InbreedingCoeff=0.7502;MQ=78.13;MQ0=0;MQRankSum=-2.068;QD=9.43;ReadPosRankSum=-1.395;VQSLOD=0.3600;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,13:22:22.39:300,22,0	0/0:12,0:12:36.07:0,36,372	0/0:22,0:20:33.02:0,33,344	0/0:10,0:10:24.01:0,24,236	0/0:23,0:23:48.07:0,48,503	0/0:31,0:31:87.21:0,87,926	0/0:18,0:18:42.06:0,42,431	0/0:19,0:19:17.96:0,18,183	0/0:21,0:22:51:0,51,598	0/0:21,0:21:45.09:0,45,473	0/0:11,0:11:33.08:0,33,351	0/0:15,0:15:42.08:0,42,438	0/0:26,0:26:75.18:0,75,798	0/0:14,0:14:33.07:0,33,351	0/0:26,0:26:63.10:0,63,662	0/0:23,0:23:60.12:0,60,631	0/0:18,0:17:42.98:0,43,449	0/0:25,0:25:72.18:0,72,766	0/0:21,1:22:1.89:0,2,420	0/0:12,0:12:30.07:0,30,319	0/0:17,0:18:50.87:0,51,523	0/0:29,0:29:75.11:0,75,775	0/0:15,0:15:45.11:0,45,479	0/0:23,0:23:54.12:0,54,573	0/0:20,0:21:50.84:0,51,522	0/0:25,0:25:72.05:0,72,726	0/0:25,0:25:63.11:0,63,670	0/0:2,0:2:6.02:0,6,64
chr10	71760478	.	GGTA	G	4595.77	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.822;DP=713;FS=1.337;HRun=0;HaplotypeScore=121.7365;InbreedingCoeff=0.9998;MQ=76.65;MQ0=0;MQRankSum=-1.806;QD=42.55;ReadPosRankSum=1.841;VQSLOD=6.2859;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,148,3355	0/0:10,0:10:30.10:0,30,690	0/0:18,0:18:54.19:0,54,1168	0/0:22,0:21:60.19:0,60,1282	0/0:34,0:34:99:0,102,2346	0/0:29,0:29:84.29:0,84,1936	0/0:21,0:21:63.21:0,63,1367	0/0:27,0:27:78.24:0,78,1672	0/0:27,0:27:81.28:0,81,1865	0/0:24,0:24:72.25:0,72,1600	0/0:24,0:24:60.21:0,60,1358	1/1:1,23:24:66.23:1124,66,0	1/1:0,19:19:51.17:855,51,0	0/0:24,0:24:69.24:0,69,1581	0/0:30,0:30:84.29:0,84,1908	0/0:31,0:31:93.31:0,93,2080	0/0:32,0:32:81.28:0,81,1863	0/0:24,0:24:66.23:0,66,1501	0/0:25,0:25:75.26:0,75,1726	0/0:22,0:22:63.22:0,63,1452	0/0:32,0:32:87.30:0,87,1960	1/1:2,17:19:51.13:828,51,0	1/1:2,23:25:60.21:1021,60,0	1/1:0,21:21:45.15:767,45,0	0/0:27,0:27:69.24:0,69,1570	0/0:39,0:39:99:0,117,2648	0/0:23,0:23:66.23:0,66,1521	0/0:11,0:11:33.11:0,33,761
chr10	71760532	.	CCACAGGCTACGA	C	8364.75	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.979;DP=684;FS=16.112;HRun=0;HaplotypeScore=255.3421;InbreedingCoeff=0.9988;MQ=89.09;MQ0=0;MQRankSum=-12.647;QD=82.01;ReadPosRankSum=3.181;VQSLOD=3.4444;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,6909	1/1:2,11:13:26.75:1015,27,0	0/0:29,0:29:82.50:0,82,3973	0/0:36,0:36:96.29:0,96,4147	0/0:39,0:39:99:0,114,6340	0/0:25,0:25:72.22:0,72,4008	0/0:15,0:15:45.15:0,45,2631	0/0:21,0:21:57.20:0,57,3235	0/0:22,0:22:66.23:0,66,3718	1/1:5,18:23:60.19:2157,60,0	1/1:3,21:25:57.20:2074,57,0	0/0:19,0:19:54.19:0,54,2741	0/0:29,0:29:81.28:0,81,4275	0/0:18,0:18:51.18:0,51,2882	0/0:23,0:23:63.22:0,63,3737	0/0:28,0:28:78.27:0,78,4600	1/1:5,16:21:39.13:1426,39,0	0/0:19,0:19:51.16:0,51,2502	0/0:17,0:17:42.14:0,42,2507	0/0:30,0:30:90.31:0,90,5349	0/0:28,0:28:84.29:0,84,4825	0/0:36,0:36:96.32:0,96,4046	0/0:29,0:29:75.26:0,75,3260	0/0:16,0:16:45.15:0,45,2302	1/1:1,19:20:45.15:1692,45,0	0/0:24,0:24:69.24:0,69,3683	0/0:28,0:28:84.27:0,84,4324	0/0:7,0:7:21.07:0,21,877
chr10	71760610	.	TA	T	2010.43	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.449;DP=654;FS=3.029;HRun=1;HaplotypeScore=82.7632;InbreedingCoeff=0.9998;MQ=84.43;MQ0=0;MQRankSum=-5.842;QD=31.91;ReadPosRankSum=2.060;VQSLOD=3.5096;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:33:96.73:1134,97,0	0/0:13,0:13:36.12:0,36,543	0/0:23,0:23:69.22:0,69,1077	0/0:21,0:21:62.63:0,63,868	0/0:34,0:34:99:0,102,1602	0/0:24,0:24:69.24:0,69,1099	0/0:23,0:23:66.21:0,66,1025	0/0:27,0:27:81.26:0,81,1251	0/0:19,0:19:57.19:0,57,906	0/0:26,0:26:75.22:0,75,1172	0/0:22,0:22:63.21:0,63,986	0/0:29,0:29:84.27:0,84,1313	0/0:29,0:29:87.30:0,87,1384	0/0:19,0:19:57.19:0,57,906	0/0:25,0:25:75.26:0,75,1195	0/0:24,0:24:72.25:0,72,1151	0/0:18,0:18:45.15:0,45,719	1/1:0,30:30:84.25:999,84,0	0/0:20,0:20:60.20:0,60,948	0/0:39,0:39:99:0,117,1861	0/0:18,0:18:54.18:0,54,859	0/0:21,0:21:63.21:0,63,997	0/0:16,0:16:48.16:0,48,767	0/0:13,0:13:39.13:0,39,620	0/0:25,0:25:72.24:0,72,1137	0/0:21,0:21:63.21:0,63,985	0/0:31,0:31:93.30:0,93,1463	0/0:11,0:11:33.11:0,33,527
chr10	71764627	.	T	TG	4728.27	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-10.000;DP=593;FS=2.377;HRun=2;HaplotypeScore=69.4715;InbreedingCoeff=0.9989;MQ=96.92;MQ0=0;MQRankSum=-0.422;QD=37.23;ReadPosRankSum=5.213;VQSLOD=5.3275;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:69.23:994,69,0	0/0:8,0:8:24.08:0,24,297	0/0:31,0:32:88.35:0,88,1008	0/0:31,0:31:75.36:0,75,857	0/0:32,0:32:90.25:0,90,1089	0/0:21,0:21:54.17:0,54,669	0/0:16,0:16:48.15:0,48,595	0/0:37,0:37:99:0,108,1328	0/0:22,0:22:63.19:0,63,768	0/0:29,0:29:84.26:0,84,1031	0/0:23,0:23:69.22:0,69,855	1/1:1,19:20:51.17:734,51,0	1/1:1,19:20:54.18:777,54,0	0/0:22,0:22:66.21:0,66,818	0/0:23,0:23:60.19:0,60,744	0/0:16,0:16:39.12:0,39,483	0/0:18,0:18:54.17:0,54,669	1/1:0,10:10:30.10:432,30,0	0/0:20,0:20:57.18:0,57,707	0/0:18,0:18:48.11:0,48,578	0/0:21,0:21:60.19:0,60,743	1/1:1,21:22:60.20:864,60,0	1/1:0,14:14:39.10:539,39,0	1/1:1,13:14:27.09:389,27,0	0/0:21,0:21:63.20:0,63,781	0/0:26,0:26:78.23:0,78,955	0/0:22,0:22:63.15:0,63,754	0/0:8,0:8:24.05:0,24,272
chr10	71765197	.	C	CAT	332.55	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=4.557;DP=393;FS=0.000;HRun=0;HaplotypeScore=146.7616;InbreedingCoeff=0.2482;MQ=61.58;MQ0=7;MQRankSum=-1.874;QD=3.78;ReadPosRankSum=0.536;VQSLOD=2.5535;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:14.31:0,14,99	0/0:3,0:3:5.96:0,6,44	0/0:15,0:7:23.98:0,24,222	0/0:21,0:16:33.94:0,34,330	0/0:18,0:16:5.94:0,6,42	0/0:15,0:15:5.74:0,6,36	0/1:18,0:17:11.21:11,0,39	0/0:29,0:25:5.33:0,5,361	0/0:10,0:10:4.49:0,4,28	1/1:8,12:20:39.68:371,40,0	1/1:8,0:8:8.74:60,9,0	0/0:7,0:7:11.89:0,12,84	0/0:7,0:7:9.68:0,10,60	0/0:13,0:13:3.12:0,3,20	0/0:8,0:8:6.03:0,6,69	0/1:14,0:14:2.94:3,0,35	0/0:14,0:12:4.39:0,4,89	0/0:7,0:7:17.58:0,18,126	0/1:20,0:18:5.77:6,0,145	0/0:17,0:16:18.34:0,18,214	0/0:21,0:21:30.23:0,30,305	0/0:13,0:12:8.94:0,9,66	0/0:10,0:10:8.91:0,9,63	0/1:8,0:8:11.38:11,0,18	0/0:20,0:20:18.31:0,18,136	0/0:12,0:12:11.82:0,12,203	0/0:16,0:16:8.52:0,9,94	0/0:9,0:9:6.38:0,6,77
chr10	71765240	.	TA	T	1950.09	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.682;DP=436;FS=0.544;HRun=1;HaplotypeScore=55.1571;InbreedingCoeff=0.9754;MQ=91.35;MQ0=3;MQRankSum=-1.727;QD=30.95;ReadPosRankSum=2.834;VQSLOD=3.3510;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.16:0,54,837	0/0:2,0:2:6.02:0,6,96	0/0:21,0:21:58.15:0,58,934	0/0:21,0:21:63.21:0,63,1001	0/0:25,0:24:63.17:0,63,978	0/0:18,0:18:54.18:0,54,862	0/0:16,0:16:39.13:0,39,623	0/0:27,0:27:81.23:0,81,1223	0/0:10,0:10:30.10:0,30,478	0/0:20,0:20:60.20:0,60,959	0/0:10,0:10:27.09:0,27,430	1/1:0,11:11:27.09:377,27,0	1/1:0,10:10:30.10:419,30,0	0/0:17,0:17:51.17:0,51,808	0/0:12,0:12:36.12:0,36,575	0/0:14,0:14:33.11:0,33,527	0/0:14,0:13:36.12:0,36,575	1/1:0,6:6:18.06:252,18,0	0/0:14,0:13:36.10:0,36,551	0/0:22,0:21:60.20:0,60,958	0/0:22,0:22:63.21:0,63,1007	1/1:0,12:12:21.07:293,21,0	1/1:0,14:14:30.10:419,30,0	1/1:0,10:10:27.09:377,27,0	0/0:17,0:17:51.16:0,51,793	0/0:12,0:12:36.12:0,36,576	0/0:27,0:27:78.25:0,78,1221	0/0:11,0:11:33.11:0,33,527
chr10	71769070	.	GAAAC	G	865.38	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.018;DP=739;FS=0.000;HRun=0;HaplotypeScore=117.2337;InbreedingCoeff=0.9987;MQ=83.55;MQ0=0;MQRankSum=-3.176;QD=26.22;ReadPosRankSum=0.482;VQSLOD=3.4502;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:33:57.11:960,57,0	0/0:12,0:12:36.12:0,36,929	0/0:27,0:27:66.17:0,66,1667	0/0:27,0:28:47.81:0,48,1463	0/0:28,0:28:81.26:0,81,2001	0/0:30,0:30:78.25:0,78,1960	0/0:15,0:15:45.15:0,45,1116	0/0:37,0:37:96.31:0,96,2195	0/0:17,0:17:48.16:0,48,1239	0/0:30,0:30:78.27:0,78,1989	0/0:26,0:26:69.24:0,69,1781	0/0:30,0:30:84.25:0,84,2012	0/0:28,0:28:72.23:0,72,1753	0/0:23,0:23:57.17:0,57,1340	0/0:29,0:29:81.25:0,81,1983	0/0:40,0:39:99:0,105,2651	0/0:10,0:10:27.09:0,27,626	0/0:16,0:16:42.14:0,42,1039	0/0:19,0:19:48.16:0,48,1216	0/0:38,0:38:93.32:0,93,2367	0/0:39,0:39:99:0,114,2883	0/0:36,0:36:96.32:0,96,2396	0/0:25,0:25:63.22:0,63,1584	0/0:22,0:22:60.20:0,60,1498	0/0:15,0:15:39.13:0,39,951	0/0:31,0:31:75.25:0,75,1882	0/0:35,0:35:81.20:0,81,1819	0/0:20,0:20:54.19:0,54,1367
chr10	71774792	.	CT	C	6661.31	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=9.283;DP=650;FS=5.503;HRun=2;HaplotypeScore=109.5319;InbreedingCoeff=0.9809;MQ=75.56;MQ0=1;MQRankSum=-5.641;QD=33.64;ReadPosRankSum=2.313;VQSLOD=4.6100;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.27:0,84,1236	1/1:0,4:4:12.04:156,12,0	0/0:24,0:22:56.70:0,57,858	0/0:21,0:19:57.19:0,57,839	0/0:28,0:28:84.27:0,84,1238	0/0:25,0:25:69.23:0,69,1034	0/0:17,0:17:51.14:0,51,723	0/0:36,0:36:96.31:0,96,1394	0/0:30,0:30:75.23:0,75,1085	1/1:1,32:33:93.30:1207,93,0	1/1:0,22:22:57.10:717,57,0	1/1:2,14:15:33.11:428,33,0	1/1:0,16:16:39.13:505,39,0	0/0:23,0:23:69.23:0,69,1016	0/0:31,0:31:93.32:0,93,1393	0/0:21,0:21:60.19:0,60,878	1/1:0,12:12:30.10:388,30,0	1/1:0,13:13:39.13:506,39,0	0/0:20,0:20:60.20:0,60,900	0/0:50,0:50:99:0,150,2189	0/0:22,0:22:57.16:0,57,809	1/1:1,24:25:69.21:882,69,0	1/1:1,23:24:63.19:804,63,0	1/1:1,12:13:27.04:330,27,0	1/1:0,20:20:57.19:739,57,0	0/0:26,2:28:6.34:0,6,1056	0/0:40,0:40:99:0,117,1707	0/0:8,0:8:24.08:0,24,360
chr10	71774819	.	TGATA	T	3705.37	PASS	AB=0.821;AC=21;AF=0.404;AN=52;BaseQRankSum=4.129;DP=627;FS=3.851;HRun=0;HaplotypeScore=167.9200;InbreedingCoeff=0.7699;MQ=58.34;MQ0=6;MQRankSum=0.811;QD=14.76;ReadPosRankSum=2.346;VQSLOD=3.3612;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:33.09:0,33,704	1/1:2,0:4:5.88:43,6,0	./.	./.	0/0:14,0:35:48.71:0,49,856	0/0:23,0:23:36.12:0,36,830	0/0:14,0:14:15.05:0,15,352	0/0:32,0:27:12.04:0,12,244	0/0:15,0:33:30.10:0,30,519	0/1:20,0:27:1.69:172,0,2	1/1:14,0:21:14.43:106,14,0	0/0:10,0:18:30.10:0,30,522	0/0:12,0:15:12.04:0,12,198	0/0:19,0:19:33.11:0,33,775	0/0:28,0:28:36.10:0,36,750	0/0:27,0:27:51.17:0,51,1150	0/1:7,0:10:0:0,0,0	0/1:8,0:8:21.90:22,0,32	1/1:18,8:26:24.08:366,24,0	1/1:21,27:48:72.24:1116,72,0	1/1:12,10:22:24.08:372,24,0	0/0:18,0:26:30.09:0,30,495	0/0:16,0:19:8.52:0,9,92	0/0:10,0:19:3.01:0,3,52	1/1:10,0:18:18.01:167,18,0	1/1:12,12:24:36.12:552,36,0	1/1:18,17:35:42.14:651,42,0	1/1:3,3:6:9.03:139,9,0
chr10	71774834	.	TA	T	472.95	PASS	AB=0.887;AC=6;AF=0.107;AN=56;BaseQRankSum=7.792;DP=572;FS=1.398;HRun=1;HaplotypeScore=143.6305;InbreedingCoeff=0.1929;MQ=53.48;MQ0=8;MQRankSum=-7.081;QD=6.57;ReadPosRankSum=-1.713;VQSLOD=0.0479;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:68.86:0,69,1070	1/1:2,1:3:8.06:89,8,0	0/0:21,0:14:36.96:0,37,493	0/0:10,0:3:8.98:0,9,110	0/0:34,0:33:75.86:0,76,929	0/0:22,0:22:60.20:0,60,944	0/0:13,0:13:36.10:0,36,536	0/0:33,0:27:55.31:0,55,1105	0/0:32,0:32:66.19:0,66,860	0/1:19,7:26:99:264,0,413	0/1:15,2:17:99:110,0,234	0/0:18,0:17:36.08:0,36,389	0/0:13,0:13:27.08:0,27,362	0/0:21,0:21:57.15:0,57,864	0/0:25,0:25:72.23:0,72,1099	0/0:29,0:29:84.29:0,84,1314	0/1:7,0:7:23.66:24,0,191	0/0:12,0:11:33.09:0,33,482	0/0:19,0:19:44.95:0,45,530	0/0:42,0:42:75.35:0,75,738	0/0:19,0:19:31.04:0,31,345	0/0:24,0:24:51.12:0,51,616	0/0:18,0:18:36.12:0,36,529	0/0:16,1:17:8.79:0,9,121	0/1:16,3:19:99:111,0,232	0/0:19,0:19:37.57:0,38,348	0/0:26,0:26:45.14:0,45,440	0/0:6,0:6:12.77:0,13,137
chr10	71774897	.	TATAGAGATAGAG	T	2447.71	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=9.473;DP=549;FS=8.760;HRun=0;HaplotypeScore=240.0870;InbreedingCoeff=0.9014;MQ=72.21;MQ0=0;MQRankSum=-9.922;QD=17.36;ReadPosRankSum=-2.225;VQSLOD=1.0191;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:39.11:0,39,2016	1/1:5,2:5:11.99:241,12,0	0/0:43,0:36:77.42:0,77,3020	0/0:47,0:35:32.10:0,32,1830	0/0:28,0:28:66.20:0,66,3363	0/0:19,0:19:45.01:0,45,2305	0/0:6,0:6:12.04:0,12,726	0/0:28,0:28:63.22:0,63,3081	0/0:19,0:19:36.12:0,36,1914	1/1:12,5:17:37.85:929,38,0	1/1:18,3:20:2.94:18,3,0	1/1:6,2:8:11.94:166,12,0	1/1:8,1:9:23.88:558,24,0	0/0:26,0:26:63.67:0,64,3272	0/0:22,0:22:60.18:0,60,3211	0/0:32,0:32:96.30:0,96,4635	1/1:10,0:10:17.89:313,18,0	1/1:8,0:8:11.95:241,12,0	0/0:13,0:13:36.12:0,36,1988	0/0:24,0:24:57.13:0,57,2332	0/0:20,0:20:39.12:0,39,2127	1/1:11,6:17:8.85:56,9,0	1/1:11,1:11:5.88:45,6,0	1/1:19,0:19:3.40:18,3,0	1/1:11,2:13:11.72:73,12,0	0/0:29,0:29:75.23:0,75,3630	0/0:23,0:23:57.20:0,57,3129	0/0:11,0:11:27.07:0,27,1419
chr10	71774909	.	GATAGAGA	G	1162.67	PASS	AB=0.654;AC=16;AF=0.286;AN=56;BaseQRankSum=8.762;DP=523;FS=0.000;HRun=0;HaplotypeScore=170.7604;InbreedingCoeff=0.6556;MQ=65.98;MQ0=5;MQRankSum=-8.136;QD=11.18;ReadPosRankSum=2.650;VQSLOD=2.6192;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39.13:0,39,1446	1/1:2,0:3:8.86:108,9,0	0/0:52,0:35:92.32:0,92,2752	0/0:46,0:32:72.29:0,72,1756	0/0:28,0:28:74.47:0,74,2584	0/0:21,0:21:48.03:0,48,1818	0/0:6,0:6:18.06:0,18,699	0/0:29,0:29:87.30:0,87,2936	0/0:19,0:19:42.14:0,42,1498	0/1:9,3:14:51.61:420,0,52	0/1:6,3:16:0.72:1,0,1	1/1:4,0:5:5.49:75,5,0	1/1:5,4:9:3.13:331,3,0	0/0:25,0:25:69.24:0,69,2519	0/0:25,0:25:69.24:0,69,2501	0/0:35,0:35:99:0,105,3580	1/1:2,0:6:17.90:230,18,0	1/1:2,2:5:4.32:144,4,0	0/0:14,0:14:42.14:0,42,1550	0/0:21,0:21:57.20:0,57,1912	0/0:18,0:18:39.13:0,39,1526	0/1:6,6:13:0:0,0,0	1/1:3,6:11:1.21:4,1,0	0/1:5,8:16:0.28:0,0,1	0/0:4,3:7:2.74:0,3,12	0/0:25,0:25:75.22:0,75,2676	0/0:24,0:24:60.21:0,60,2304	0/0:8,0:8:24.08:0,24,1006
chr10	71774913	.	GAGA	G	401.35	PASS	AB=0.969;AC=10;AF=0.179;AN=56;BaseQRankSum=8.047;DP=535;FS=1.663;HRun=0;HaplotypeScore=144.0830;InbreedingCoeff=0.2802;MQ=62.65;MQ0=7;MQRankSum=-7.259;QD=4.27;ReadPosRankSum=3.526;VQSLOD=2.1271;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:42.08:0,42,890	0/1:7,0:5:37.55:38,0,38	0/0:55,0:36:97.09:0,97,1980	0/0:50,0:31:66.81:0,67,1163	0/0:27,0:27:74.94:0,75,1593	0/0:22,0:22:48.06:0,48,1115	0/0:7,0:7:21.07:0,21,492	0/0:29,0:29:87.29:0,87,1970	0/0:16,0:16:42.14:0,42,968	0/1:15,0:15:99:151,0,158	0/1:17,0:16:0.75:1,0,1	0/1:5,1:5:10.96:16,0,11	0/1:8,0:8:4.81:157,0,5	0/0:27,0:27:72.21:0,72,1693	0/0:26,0:26:69.24:0,69,1588	0/0:33,0:33:99:0,99,2228	1/1:5,1:6:14.93:126,15,0	0/1:5,0:5:11.94:44,0,12	0/0:15,0:15:45.14:0,45,977	0/0:20,0:20:54.18:0,54,1161	0/0:19,0:19:42.14:0,42,981	0/1:13,0:13:0:0,0,0	0/0:12,0:11:2.84:0,3,15	0/1:15,2:16:0.24:0,0,1	0/0:7,0:7:2.83:0,3,14	0/0:27,0:27:81.27:0,81,1805	0/0:24,0:23:57.20:0,57,1396	0/0:10,0:9:24.08:0,24,591
chr10	71774916	.	ATG	A	390.88	PASS	AB=0.983;AC=16;AF=0.286;AN=56;BaseQRankSum=8.542;DP=522;FS=8.135;HRun=0;HaplotypeScore=132.5500;InbreedingCoeff=0.4565;MQ=60.73;MQ0=10;MQRankSum=-6.998;QD=2.70;ReadPosRankSum=1.471;VQSLOD=2.1914;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,1:13:4.60:5,0,677	0/1:7,0:5:6.69:43,0,7	0/0:52,0:34:86.70:0,87,1563	0/0:49,0:28:36.40:0,36,749	0/0:25,1:26:7.86:0,8,1128	0/0:21,1:22:45.07:0,45,757	0/0:8,0:8:21.07:0,21,424	0/0:27,0:26:78.25:0,78,1463	0/0:15,1:16:17.17:0,17,705	0/1:16,0:15:99:105,0,100	0/1:17,0:16:0.04:0,0,0	0/1:6,0:5:12.84:14,0,13	1/1:8,0:8:11.45:139,11,0	0/0:27,0:27:72.24:0,72,1351	0/0:25,0:25:66.23:0,66,1275	0/0:32,0:32:73.48:0,73,1745	1/1:6,0:6:17.65:153,18,0	1/1:4,0:4:8.43:55,8,0	0/0:13,0:13:39.13:0,39,746	0/0:20,0:20:45.15:0,45,902	0/0:19,0:19:42.14:0,42,826	0/1:13,0:13:0:0,0,0	1/1:12,0:11:3:27,3,0	0/1:15,0:14:0:0,0,0	0/0:7,0:7:2.96:0,3,23	0/1:26,2:28:0.65:1,0,1337	0/0:23,1:23:57.13:0,57,1053	0/0:10,0:9:24.08:0,24,486
chr10	71774918	.	G	GT	223.08	PASS	AB=0.694;AC=11;AF=0.196;AN=56;BaseQRankSum=6.908;DP=511;FS=0.000;HRun=1;HaplotypeScore=125.3352;InbreedingCoeff=0.4093;MQ=57.64;MQ0=11;MQRankSum=-6.600;QD=2.37;ReadPosRankSum=2.942;VQSLOD=-0.4936;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:38.80:0,39,514	0/1:4,3:5:13.39:13,0,46	0/0:50,0:33:85.62:0,86,1135	0/0:44,0:24:54.99:0,55,611	0/0:26,0:26:66.07:0,66,863	0/0:22,0:22:42.09:0,42,534	0/0:9,0:9:21.06:0,21,294	0/0:25,0:24:72.24:0,72,1003	0/0:15,0:15:45.10:0,45,584	0/1:12,5:16:76.02:76,0,128	0/1:5,12:16:0.72:1,0,1	0/1:5,1:5:9.66:10,0,14	1/1:2,6:8:12.36:125,12,0	0/0:27,0:27:72.23:0,72,999	0/0:24,0:24:63.21:0,63,876	0/0:32,0:32:96.29:0,96,1292	1/1:0,6:6:10.22:92,10,0	0/1:2,2:4:4.47:41,0,4	0/0:12,0:12:36.12:0,36,502	0/0:20,0:20:51.16:0,51,684	0/0:18,0:18:42.14:0,42,584	0/1:7,6:13:0:0,0,0	0/0:4,8:11:2.99:0,3,24	0/1:5,11:14:0.38:0,0,1	0/0:4,3:7:2.95:0,3,19	0/0:28,0:28:84:0,84,1086	0/0:23,0:22:54.18:0,54,750	0/0:10,0:9:24.08:0,24,336
chr10	71774944	.	T	TGA	83.02	PASS	AB=0.966;AC=11;AF=0.220;AN=50;BaseQRankSum=0.411;DP=545;FS=52.942;HRun=0;HaplotypeScore=142.7571;InbreedingCoeff=0.0741;MQ=44.42;MQ0=18;MQRankSum=-0.082;QD=0.41;ReadPosRankSum=0.177;VQSLOD=0.7848;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:5.44:0,5,25	0/0:7,0:6:2.68:0,3,11	./.	./.	0/0:24,0:23:0.09:0,0,133	0/1:20,7:29:82.15:87,0,82	0/1:18,0:17:11.11:18,0,11	0/0:30,0:26:10.33:0,10,73	0/0:17,0:19:23.98:0,24,180	0/0:21,0:20:23.55:0,24,118	0/1:28,0:25:0:0,0,0	0/0:18,0:11:3.24:0,3,15	1/1:13,0:13:5.02:14,5,0	0/0:24,0:26:33.48:0,33,284	0/0:24,0:24:17.67:0,18,142	0/1:26,0:25:8.92:9,0,227	./.	1/1:9,0:7:8.32:50,8,0	0/0:10,0:10:11.95:0,12,104	0/1:27,0:26:9.19:9,0,288	0/0:17,0:16:6.36:0,6,32	0/0:23,0:19:5.31:0,5,26	0/0:20,0:18:2.90:0,3,16	0/0:26,0:24:2.75:0,3,16	0/0:14,0:14:0.89:0,1,2	0/1:25,0:26:5.02:5,0,124	0/1:27,0:25:16.53:17,0,143	0/0:6,0:5:2.98:0,3,21
chr10	71774979	.	GAGATAGAGAT	G	2902.05	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=2.010;DP=577;FS=9.748;HRun=0;HaplotypeScore=173.2461;InbreedingCoeff=0.3893;MQ=61.96;MQ0=14;MQRankSum=-2.611;QD=15.04;ReadPosRankSum=-3.891;VQSLOD=1.0431;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:14.83:15,0,229	1/1:9,0:8:17.89:242,18,0	0/0:31,0:17:19.90:0,20,778	0/0:39,0:21:48.06:0,48,859	0/0:25,0:24:41.25:0,41,1697	0/0:22,0:22:35.71:0,36,1069	0/0:19,0:18:14.71:0,15,803	0/0:27,0:25:73.01:0,73,1263	0/0:24,0:23:45.29:0,45,1381	1/1:20,2:20:33.63:942,34,0	1/1:18,2:18:21.96:393,22,0	0/1:19,0:14:99:178,0,162	0/1:16,0:16:49.18:247,0,49	0/0:24,0:24:60.10:0,60,1880	0/0:15,0:15:30.10:0,30,1088	0/0:25,0:24:72.18:0,72,2184	1/1:4,0:4:12.04:156,12,0	0/1:13,0:11:99:182,0,239	0/0:17,0:17:50.97:0,51,1224	0/0:33,0:32:60.68:0,61,2440	0/0:23,0:23:60.17:0,60,1248	0/1:14,0:11:53.70:91,0,54	0/1:20,0:19:34.26:351,0,34	0/1:24,0:24:69.43:88,0,69	1/1:17,1:18:14.28:205,14,0	0/0:23,0:22:10.26:0,10,1346	0/0:26,0:25:19.35:0,19,1498	0/0:11,0:10:27.09:0,27,618
chr10	71774981	.	GATAGAGAT	G	3207.05	PASS	AB=0.995;AC=17;AF=0.304;AN=56;BaseQRankSum=2.832;DP=583;FS=21.651;HRun=0;HaplotypeScore=158.4596;InbreedingCoeff=0.4363;MQ=64.82;MQ0=13;MQRankSum=-3.645;QD=16.70;ReadPosRankSum=-3.492;VQSLOD=1.0093;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:18.43:18,0,111	1/1:5,1:7:18.06:265,18,0	0/0:33,0:19:25.22:0,25,800	0/0:40,0:22:51.06:0,51,883	0/0:24,0:24:44.26:0,44,1514	0/0:23,0:23:28.15:0,28,1043	0/0:20,0:19:17.34:0,17,686	0/0:30,0:28:57.96:0,58,1276	0/0:24,0:23:10.36:0,10,1105	1/1:21,2:22:48.51:993,49,0	1/1:16,2:16:21.96:346,22,0	0/1:21,0:16:80.33:272,0,80	0/1:14,0:14:16.31:258,0,16	0/0:24,0:24:60.09:0,60,1627	0/0:11,0:14:30.10:0,30,883	0/0:25,0:24:30.27:0,30,1754	1/1:5,0:5:15.05:202,15,0	0/1:13,0:11:99:188,0,137	0/0:18,0:18:53.91:0,54,1154	0/0:32,0:31:59.87:0,60,2047	0/0:23,0:23:36.60:0,37,1034	0/1:13,0:10:3.61:134,0,4	0/1:21,0:20:3.14:419,0,3	0/1:24,0:25:32.01:94,0,32	1/1:11,4:16:14.28:204,14,0	0/0:23,0:22:2.77:0,3,1243	0/0:26,0:25:18.84:0,19,1281	0/0:11,0:11:30.10:0,30,579
chr10	71776058	.	GGAA	G	345	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.239;DP=637;FS=9.566;HRun=0;HaplotypeScore=103.0245;InbreedingCoeff=0.9941;MQ=62.94;MQ0=0;MQRankSum=-2.134;QD=34.50;ReadPosRankSum=-0.027;VQSLOD=3.8768;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,2159	0/0:8,0:8:21.07:0,21,462	0/0:28,0:23:63.21:0,63,1316	0/0:27,0:24:59.88:0,60,1295	0/0:30,0:30:84.28:0,84,1824	0/0:25,0:25:66.23:0,66,1475	0/0:20,0:20:57.20:0,57,1273	0/0:29,0:29:81.26:0,81,1658	0/0:30,0:30:90.31:0,90,2010	0/0:26,0:26:69.24:0,69,1542	0/0:14,0:14:33.11:0,33,737	0/0:28,0:28:81.28:0,81,1787	0/0:18,0:18:54.19:0,54,1182	0/0:23,0:23:63.19:0,63,1323	0/0:31,0:31:90.30:0,90,1971	0/0:25,0:25:69.24:0,69,1542	0/0:21,0:21:54.19:0,54,1189	1/1:1,9:10:27.09:439,27,0	0/0:11,0:11:33.10:0,33,653	0/0:29,0:29:81.28:0,81,1803	0/0:32,0:32:87.26:0,87,1890	0/0:13,0:13:33.11:0,33,737	0/0:16,0:16:42.14:0,42,938	0/0:29,0:29:87.30:0,87,1943	0/0:14,0:14:42.14:0,42,899	0/0:27,0:27:78.26:0,78,1666	0/0:27,0:27:81.26:0,81,1767	0/0:13,0:13:39.13:0,39,835
chr10	71777999	.	CTG	C	865.25	PASS	AB=0.935;AC=22;AF=0.393;AN=56;BaseQRankSum=9.944;DP=454;FS=0.926;HRun=0;HaplotypeScore=119.3071;InbreedingCoeff=0.7587;MQ=78.88;MQ0=2;MQRankSum=-0.144;QD=4.65;ReadPosRankSum=1.624;VQSLOD=2.8585;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,1:12:9.34:123,9,0	1/1:15,0:15:3.62:22,4,0	0/0:33,0:30:76.76:0,77,1389	0/0:17,0:14:33.01:0,33,471	0/0:21,0:21:63.22:0,63,1164	0/0:18,0:18:42.14:0,42,801	0/0:13,0:13:36.11:0,36,661	0/0:23,0:23:66.20:0,66,1163	0/0:21,0:21:60.19:0,60,1111	1/1:21,0:21:16.66:100,17,0	1/1:21,1:22:7.19:91,7,0	1/1:9,2:11:15.85:82,16,0	0/1:10,1:11:9.85:28,0,10	0/0:9,0:9:21.07:0,21,395	0/0:12,0:12:36.12:0,36,695	0/0:9,0:9:24.07:0,24,429	1/1:11,1:12:2.77:58,3,0	1/1:9,1:10:7.60:45,8,0	0/0:11,0:11:33.06:0,33,570	0/0:20,0:20:60.17:0,60,1079	0/0:15,0:15:42.14:0,42,811	1/1:14,2:16:7.98:154,8,0	0/1:19,1:20:11.66:57,0,12	1/1:17,0:17:16.61:121,17,0	1/1:16,3:19:14.86:185,15,0	0/0:21,0:21:63.19:0,63,1139	0/0:17,0:17:51.13:0,51,911	0/0:7,0:7:21.07:0,21,405
chr10	71778003	.	A	ATT	9300.23	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=16.327;DP=463;FS=5.022;HRun=1;HaplotypeScore=113.1768;InbreedingCoeff=0.9978;MQ=75.52;MQ0=3;MQRankSum=-10.934;QD=45.15;ReadPosRankSum=1.528;VQSLOD=4.9439;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,8:13:29.95:458,30,0	1/1:4,15:19:54.10:942,54,0	0/0:33,0:27:78.19:0,78,1134	0/0:16,0:10:23.85:0,24,333	0/0:22,0:22:66.19:0,66,952	0/0:18,0:18:42.13:0,42,611	0/0:12,0:11:33.11:0,33,505	0/0:19,0:19:57.17:0,57,815	0/0:20,0:20:60.17:0,60,872	1/1:2,18:21:63.16:1141,63,0	1/1:2,20:22:60.21:1138,60,0	1/1:2,8:10:27.04:479,27,0	1/1:5,9:14:33.06:592,33,0	0/0:8,0:8:21.07:0,21,319	0/0:13,0:13:36.12:0,36,551	0/0:9,0:9:24.07:0,24,343	1/1:4,11:15:40.90:717,41,0	1/1:3,9:12:30.10:577,30,0	0/0:11,0:11:30.06:0,30,430	0/0:18,0:18:54.17:0,54,805	0/0:14,0:14:42.14:0,42,642	1/1:5,13:19:48.06:830,48,0	1/1:6,17:23:60.10:1066,60,0	1/1:7,12:19:35.80:612,36,0	1/1:4,15:19:44.98:749,45,0	0/0:20,0:20:57.19:0,57,868	0/0:17,0:17:51.17:0,51,763	0/0:7,0:7:21.07:0,21,321
chr10	71778587	.	AGAAAAGGCT	A	7063.73	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.165;DP=674;FS=2.045;HRun=0;HaplotypeScore=211.5686;InbreedingCoeff=0.9996;MQ=82.47;MQ0=0;MQRankSum=-13.668;QD=86.14;ReadPosRankSum=1.576;VQSLOD=5.1688;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,124,5798	1/1:0,11:11:33.11:1043,33,0	0/0:29,0:29:84.29:0,84,3808	0/0:32,0:32:93.28:0,93,3895	0/0:32,0:32:96.33:0,96,4623	0/0:16,0:16:42.14:0,42,2045	0/0:15,0:15:42.14:0,42,1990	0/0:30,0:30:90.31:0,90,4209	0/0:25,0:25:75.26:0,75,3553	1/1:1,12:13:36.12:1137,36,0	1/1:2,28:30:87.30:2704,87,0	0/0:31,0:31:90.30:0,90,4218	0/0:21,0:21:60:0,60,2753	0/0:19,0:19:57.20:0,57,2675	0/0:34,0:34:90.31:0,90,4272	0/0:24,0:24:63.19:0,63,2838	1/1:2,14:14:36.12:1137,36,0	0/0:19,0:19:54.03:0,54,2265	0/0:16,0:16:48.16:0,48,2366	0/0:23,0:23:66.23:0,66,3251	0/0:33,0:33:99:0,99,4422	0/0:16,0:16:48.16:0,48,2302	0/0:23,0:23:66.23:0,66,2977	0/0:34,0:34:99:0,99,4660	1/1:0,12:12:33.11:1043,33,0	0/0:36,0:36:99:0,105,5064	0/0:28,0:27:81.01:0,81,3965	0/0:12,0:12:27.09:0,27,1138
chr10	71778606	.	G	GA	3131.49	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.927;DP=702;FS=4.661;HRun=2;HaplotypeScore=136.3789;InbreedingCoeff=0.9989;MQ=72.64;MQ0=0;MQRankSum=-13.279;QD=33.31;ReadPosRankSum=-1.902;VQSLOD=2.6078;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:99:0,105,1256	1/1:0,12:12:36.12:517,36,0	0/0:23,0:23:66.20:0,66,809	0/0:42,0:42:99:0,104,1358	0/0:34,0:34:90.26:0,90,1090	0/0:15,0:15:39.12:0,39,483	0/0:16,0:16:48.14:0,48,582	0/0:28,0:28:84.24:0,84,1019	0/0:25,0:25:72.21:0,72,879	1/1:2,13:15:36.12:514,36,0	1/1:2,30:32:87.21:1201,87,0	0/0:32,0:32:93.29:0,93,1150	0/0:20,0:20:54.16:0,54,656	0/0:18,0:18:51.16:0,51,632	0/0:36,0:36:96.29:0,96,1176	0/0:20,0:20:51.16:0,51,632	1/1:3,14:14:36.12:512,36,0	0/0:19,0:19:51.13:0,51,618	0/0:24,0:24:66.16:0,66,766	0/0:25,0:25:66.21:0,66,818	0/0:34,0:34:96.30:0,96,1189	0/0:21,0:21:57.15:0,57,681	0/0:25,0:25:57.18:0,57,706	0/0:33,0:33:96.26:0,96,1172	1/1:3,15:18:44.97:562,45,0	0/0:37,0:37:99:0,102,1209	0/0:31,0:30:90.25:0,90,1088	0/0:7,0:7:21.07:0,21,260
chr10	71779883	.	T	TAGA	5276.20	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-12.927;DP=670;FS=5.573;HRun=0;HaplotypeScore=104.5997;InbreedingCoeff=0.9964;MQ=83.14;MQ0=0;MQRankSum=-1.593;QD=39.97;ReadPosRankSum=4.255;VQSLOD=6.0057;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,12:25:30.06:577,30,0	0/0:17,0:17:51.17:0,51,745	0/0:39,0:39:66.22:0,66,942	0/0:23,0:22:39.08:0,39,490	0/0:26,0:26:66.21:0,66,947	0/0:23,0:23:54.16:0,54,771	0/0:20,0:20:51.17:0,51,747	0/0:34,0:34:69.21:0,69,974	0/0:18,0:18:48.14:0,48,682	0/0:37,0:36:84.24:0,84,1210	0/0:22,0:22:48.16:0,48,702	1/1:3,17:20:42.14:867,42,0	1/1:5,11:17:36.12:741,36,0	0/0:12,0:12:27.08:0,27,376	0/0:22,0:22:48.15:0,48,684	0/0:23,0:23:42.14:0,42,615	0/0:33,0:33:75.24:0,75,1075	0/0:23,0:23:51.17:0,51,745	0/0:21,0:21:48.14:0,48,683	0/0:33,0:33:69.23:0,69,1009	0/0:7,0:7:15.05:0,15,220	1/1:7,22:29:66.23:1363,66,0	1/1:8,16:25:51.18:1047,51,0	1/1:5,11:16:33.11:681,33,0	0/0:28,0:28:81.25:0,81,1184	0/0:25,0:25:60.19:0,60,862	0/0:36,0:36:87.29:0,87,1272	0/0:16,0:16:48.14:0,48,683
chr10	71780236	.	A	AG	9476.08	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-4.207;DP=618;FS=0.981;HRun=2;HaplotypeScore=60.9814;InbreedingCoeff=0.9866;MQ=67.40;MQ0=0;MQRankSum=1.657;QD=39.48;ReadPosRankSum=3.072;VQSLOD=5.2801;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:90.30:1296,90,0	1/1:0,7:7:18.06:259,18,0	0/0:21,0:20:57.18:0,57,700	0/0:15,0:15:42.13:0,42,512	0/0:30,0:30:90.25:0,90,1090	0/0:19,0:19:54.17:0,54,669	0/0:26,0:26:69.22:0,69,855	0/0:42,0:42:99:0,114,1413	0/0:26,0:26:75.24:0,75,928	1/1:0,25:24:72.23:1010,72,0	1/1:0,16:16:48.16:691,48,0	1/1:1,21:22:63.21:907,63,0	1/1:0,10:9:27.09:389,27,0	0/0:15,0:15:42.13:0,42,520	0/0:16,0:16:45.14:0,45,558	0/0:14,0:14:42.13:0,42,521	1/1:1,20:21:57.19:821,57,0	1/1:1,11:12:33.11:475,33,0	0/0:20,0:19:57.17:0,57,696	0/0:27,0:27:75.22:0,75,917	0/0:24,0:24:72.21:0,72,880	1/1:0,27:27:75.25:1080,75,0	1/1:0,19:19:51.17:734,51,0	1/1:0,27:27:66.22:950,66,0	1/1:0,22:21:60.20:864,60,0	0/0:23,1:24:7:0,7,753	0/0:24,0:23:72.20:0,72,866	0/0:35,0:35:99:0,105,1301
chr10	71786460	.	G	GGGTAT	5580.59	PASS	AC=32;AF=1.000;AN=32;BaseQRankSum=-1.501;DP=311;FS=0.000;HRun=0;HaplotypeScore=14.0283;InbreedingCoeff=-0.0687;MQ=16.30;MQ0=169;MQRankSum=-1.559;QD=29.84;ReadPosRankSum=1.675;VQSLOD=3.6809;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,10:15:15.49:931,15,0	./.	./.	./.	1/1:5,4:5:12.04:379,12,0	1/1:15,2:3:6.02:190,6,0	./.	./.	1/1:8,9:9:27.09:854,27,0	./.	./.	1/1:9,4:4:12.04:379,12,0	1/1:10,2:2:6.02:190,6,0	1/1:10,3:3:9.03:284,9,0	./.	./.	1/1:24,3:18:9.03:285,9,0	./.	1/1:10,3:4:9.03:285,9,0	1/1:3,1:1:3.01:95,3,0	1/1:2,1:2:3.01:95,3,0	1/1:2,4:4:12.04:379,12,0	1/1:4,2:2:6.02:190,6,0	1/1:5,3:5:9.03:285,9,0	./.	./.	1/1:2,5:5:15.05:475,15,0	1/1:1,3:3:9.03:285,9,0
chr10	71788951	.	GAA	G	2260.98	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=11.781;DP=407;FS=2.250;HRun=12;HaplotypeScore=68.1512;InbreedingCoeff=0.9281;MQ=63.71;MQ0=12;MQRankSum=2.847;QD=12.99;ReadPosRankSum=4.841;VQSLOD=2.1783;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,31:34:65.98:671,66,0	1/1:0,0:3:7.98:32,8,0	0/0:26,0:7:2.84:0,3,78	0/0:14,0:6:4.24:0,4,47	0/0:17,0:18:44.57:0,45,590	0/0:15,0:14:31.87:0,32,425	0/0:8,0:9:17.50:0,18,208	0/0:20,0:18:43.91:0,44,556	0/0:12,0:12:30.06:0,30,421	1/1:3,0:16:34.60:149,35,0	1/1:1,0:18:29.79:147,30,0	1/1:4,12:16:30.06:355,30,0	1/1:3,8:10:21.05:214,21,0	0/0:11,0:11:33.11:0,33,491	0/0:8,0:9:26.45:0,26,347	0/0:11,0:11:30.10:0,30,441	1/1:2,0:12:12.78:54,13,0	1/1:4,8:11:21.02:213,21,0	0/0:17,0:19:44.01:0,44,593	0/0:11,0:12:29.58:0,30,396	0/0:12,0:12:21.54:0,22,301	1/1:1,9:9:18.04:183,18,0	1/1:0,16:15:23.68:244,24,0	1/1:1,5:6:8.85:91,9,0	1/1:2,0:14:30.19:130,30,0	0/0:13,0:13:33.11:0,33,475	0/0:19,0:22:59.44:0,59,739	0/0:9,0:10:29.58:0,30,396
chr10	71797520	.	C	CAT	5862.29	PASS	AB=0.685;AC=20;AF=0.370;AN=54;BaseQRankSum=-4.892;DP=512;FS=0.000;HRun=0;HaplotypeScore=56.3671;InbreedingCoeff=0.5238;MQ=51.97;MQ0=9;MQRankSum=-4.322;QD=23.83;ReadPosRankSum=2.984;VQSLOD=5.2684;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,28:32:66.23:1102,66,0	1/1:0,3:2:6.02:100,6,0	0/0:8,0:2:5.91:0,6,55	0/1:9,0:5:3.02:3,0,67	0/0:22,0:22:54.17:0,54,687	0/0:27,0:27:66.18:0,66,810	0/0:20,0:20:42.06:0,42,488	0/0:19,0:19:39.12:0,39,485	0/0:29,0:29:81.24:0,81,1017	1/1:3,23:23:57:953,57,0	0/1:5,13:18:8.10:421,0,8	1/1:1,13:14:33.11:552,33,0	1/1:6,21:28:19:863,19,0	0/0:16,0:16:42.13:0,42,535	0/0:14,0:13:33.11:0,33,420	0/0:16,0:16:44.93:0,45,559	0/1:5,26:27:13.19:890,0,13	./.	0/0:19,0:16:45.13:0,45,558	0/0:15,0:15:39.08:0,39,478	0/0:23,0:23:60.18:0,60,749	0/1:4,8:11:25.94:138,0,26	0/1:3,15:16:11.11:374,0,11	1/1:1,5:5:9.03:150,9,0	1/1:6,8:14:18.06:282,18,0	0/1:25,2:27:34.24:34,0,668	0/0:28,0:28:69.18:0,69,860	0/0:7,0:7:18.06:0,18,229
chr10	71797910	.	AT	A	138.16	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.882;DP=441;FS=1.380;HRun=1;HaplotypeScore=41.0230;InbreedingCoeff=0.8490;MQ=54.21;MQ0=5;MQRankSum=-1.563;QD=13.82;ReadPosRankSum=1.388;VQSLOD=2.8245;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:36:81.21:0,81,1219	0/0:2,0:2:6.01:0,6,73	0/0:18,0:7:21.07:0,21,320	0/0:19,0:10:30.10:0,30,461	0/0:17,0:17:51.13:0,51,733	0/0:13,0:13:36.11:0,36,550	0/0:18,0:18:54.18:0,54,848	0/0:19,0:17:51.17:0,51,793	0/0:23,0:23:66.15:0,66,933	0/0:14,0:14:42.13:0,42,648	0/0:16,0:16:45.12:0,45,668	0/0:13,0:13:39.13:0,39,612	0/0:12,0:12:33.10:0,33,501	0/0:9,0:9:20.90:0,21,300	0/0:21,0:21:60.19:0,60,920	0/0:10,0:10:30.10:0,30,477	0/0:19,0:19:42.07:0,42,614	1/1:2,8:9:26.96:232,27,0	0/0:19,0:18:51.14:0,51,772	0/0:15,0:15:45.15:0,45,718	0/0:33,0:33:99:0,99,1535	0/0:11,0:11:30.10:0,30,478	0/0:14,0:14:42.07:0,42,634	0/0:18,0:18:42.14:0,42,669	0/0:9,0:9:27.08:0,27,404	0/0:17,0:17:51.17:0,51,792	0/0:10,0:10:26.69:0,27,399	0/0:3,0:3:9.03:0,9,143
chr10	71797917	.	GC	G	149.48	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.963;DP=445;FS=1.395;HRun=1;HaplotypeScore=43.8622;InbreedingCoeff=0.8030;MQ=54.76;MQ0=2;MQRankSum=0.176;QD=16.61;ReadPosRankSum=1.339;VQSLOD=3.8042;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:40:90.18:0,90,1219	0/0:1,0:1:3.01:0,3,38	0/0:12,2:8:24.06:0,24,324	0/0:17,0:11:33.10:0,33,463	0/0:15,0:15:45.15:0,45,647	0/0:15,0:15:36.06:0,36,463	0/0:19,0:19:56.98:0,57,758	0/0:21,0:21:62.99:0,63,806	0/0:19,0:19:54.15:0,54,756	0/0:15,0:15:45.07:0,45,588	0/0:15,0:15:42.06:0,42,563	0/0:14,0:14:41.82:0,42,551	0/0:13,0:13:36.08:0,36,494	0/0:10,0:10:23.87:0,24,315	0/0:20,0:20:52.31:0,52,676	0/0:11,0:11:33.10:0,33,455	0/0:16,0:16:36.12:0,36,522	1/1:1,8:9:27:243,27,0	0/0:19,0:19:54.07:0,54,734	0/0:18,0:18:51.03:0,51,665	0/0:34,0:34:99:0,102,1377	0/0:12,0:12:33.05:0,33,438	0/0:15,0:15:41.95:0,42,541	0/0:20,0:20:48.14:0,48,675	0/0:9,0:9:27.06:0,27,367	0/0:18,0:18:51.06:0,51,674	0/0:10,0:10:23.76:0,24,345	0/0:3,0:3:9.03:0,9,123
chr10	71798029	.	TA	T	110.95	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.553;DP=370;FS=6.019;HRun=7;HaplotypeScore=53.8651;InbreedingCoeff=0.8265;MQ=58.99;MQ0=1;MQRankSum=-3.576;QD=13.87;ReadPosRankSum=1.327;VQSLOD=2.8116;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.17:0,54,678	0/0:5,0:5:12.04:0,12,151	0/0:8,1:5:12.04:0,12,147	0/0:18,0:11:18.06:0,18,224	0/0:23,0:23:51.15:0,51,628	0/0:12,0:12:36.11:0,36,451	0/0:9,0:9:24.08:0,24,302	0/0:22,0:22:63.20:0,63,789	0/0:9,0:9:12.04:0,12,151	0/0:17,0:17:48.14:0,48,580	0/0:19,0:19:51.11:0,51,609	0/0:8,0:8:24.08:0,24,302	0/0:11,0:11:15.05:0,15,189	0/0:10,0:10:24.08:0,24,302	0/0:12,0:12:30.08:0,30,364	0/0:8,0:8:21.07:0,21,264	0/0:13,0:13:36.07:0,36,434	1/1:1,7:8:21.01:203,21,0	0/0:19,0:19:54.17:0,54,670	0/0:14,0:14:39.12:0,39,491	0/0:10,0:10:27.09:0,27,338	0/0:3,0:3:9.03:0,9,113	0/0:16,0:16:42.12:0,42,513	0/0:6,0:6:18.06:0,18,226	0/0:18,0:18:39.12:0,39,491	0/0:25,0:25:72.23:0,72,904	0/0:19,0:19:42.13:0,42,528	0/0:7,0:7:18.06:0,18,226
chr10	71798054	.	T	TAA	3182.33	PASS	AB=0.615;AC=23;AF=0.411;AN=56;BaseQRankSum=1.085;DP=392;FS=0.441;HRun=10;HaplotypeScore=55.1026;InbreedingCoeff=0.9059;MQ=65.43;MQ0=2;MQRankSum=0.330;QD=20.40;ReadPosRankSum=1.361;VQSLOD=2.3402;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:18:29.82:105,30,0	1/1:0,6:6:12.01:154,12,0	0/0:14,0:9:20.98:0,21,199	0/0:13,0:8:16.79:0,17,143	0/0:22,0:24:53.78:0,54,513	0/0:14,0:14:35.65:0,36,345	0/0:8,0:8:21.04:0,21,214	0/0:26,0:26:54.05:0,54,548	0/0:10,0:10:24.04:0,24,244	1/1:2,17:19:50.63:685,51,0	1/1:0,19:21:59.17:822,59,0	1/1:2,0:10:17.47:62,17,0	1/1:1,0:9:9.98:35,10,0	0/0:7,0:7:18.04:0,18,183	0/0:12,0:13:26.75:0,27,319	0/0:8,0:8:24.05:0,24,243	1/1:1,19:22:23.66:714,24,0	1/1:2,0:10:16.73:57,17,0	0/0:23,0:23:63.11:0,63,641	0/0:19,0:19:54.10:0,54,549	0/0:8,0:10:26.53:0,27,237	0/1:2,0:8:2.91:14,0,3	1/1:2,0:12:24.95:88,25,0	1/1:1,0:3:2.50:9,2,0	1/1:1,15:17:45.15:654,45,0	0/0:27,0:27:73.45:0,73,760	0/0:14,0:14:36.04:0,36,359	0/0:5,0:5:15.03:0,15,153
chr10	71798929	.	GGAGAGAGA	G	468.45	PASS	AB=0.956;AC=13;AF=0.260;AN=50;BaseQRankSum=4.384;DP=508;FS=31.459;HRun=0;HaplotypeScore=127.8311;InbreedingCoeff=0.4465;MQ=72.32;MQ0=19;MQRankSum=-3.397;QD=3.72;ReadPosRankSum=-1.094;VQSLOD=0.8755;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:24.01:0,24,372	./.	./.	0/0:47,0:24:0.47:0,0,1	0/0:23,0:22:12.01:0,12,267	0/0:11,0:11:9.03:0,9,198	0/0:18,0:18:21.07:0,21,585	0/0:32,0:32:7.27:0,7,92	0/0:17,0:18:14.56:0,15,291	./.	1/1:18,0:18:3:30,3,0	1/1:9,9:19:9.02:173,9,0	1/1:5,5:10:5.59:132,6,0	0/0:14,0:14:12.04:0,12,318	0/0:17,0:17:21.01:0,21,517	0/1:9,0:10:0.20:0,0,20	0/1:18,0:18:24.43:43,0,24	0/0:10,0:13:8.97:0,9,100	0/0:16,0:15:3.90:0,4,78	0/0:14,0:18:15.03:0,15,297	0/0:16,0:15:9.03:0,9,238	1/1:6,0:7:3.01:56,3,0	1/1:18,0:19:3.01:40,3,0	0/1:23,0:24:35.15:134,0,35	0/0:10,0:10:5.99:0,6,50	0/0:16,0:16:24.08:0,24,710	0/0:15,0:15:18.03:0,18,497	0/0:12,0:11:12.04:0,12,399
chr10	71798978	.	GAGAGAGACAT	G	939.55	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=7.265;DP=556;FS=0.000;HRun=0;HaplotypeScore=146.0042;InbreedingCoeff=0.5004;MQ=60.65;MQ0=5;MQRankSum=-0.014;QD=6.18;ReadPosRankSum=1.035;VQSLOD=2.6106;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:53.21:0,53,909	1/1:3,0:3:9.03:174,9,0	0/0:14,0:13:37.26:0,37,608	0/0:16,0:8:23.57:0,24,424	0/0:26,0:26:55.07:0,55,943	0/0:25,0:25:57.65:0,58,1049	0/0:24,0:24:54.12:0,54,1294	0/0:32,0:32:80.33:0,80,1222	0/0:20,0:19:38.79:0,39,759	1/1:12,0:12:33.11:542,33,0	1/1:0,11:11:2.76:89,3,0	0/1:20,0:20:5.70:6,0,432	0/1:13,0:12:20.01:20,0,141	0/0:15,0:15:33.11:0,33,885	0/0:24,0:24:60.18:0,60,1366	0/1:10,0:10:0.03:0,0,395	1/1:33,0:33:8.64:141,9,0	0/0:17,0:17:40.01:0,40,675	0/0:15,0:15:39.99:0,40,700	0/0:33,0:32:69.21:0,69,1184	0/0:26,0:25:45.14:0,45,872	0/1:18,0:18:3.22:3,0,643	0/0:19,0:18:6.88:0,7,444	0/1:15,0:14:87.05:87,0,290	1/1:17,0:17:3:38,3,0	0/0:26,0:26:74.28:0,74,1681	0/0:27,0:27:69.71:0,70,1318	0/0:10,0:10:27.98:0,28,564
chr10	71798980	.	GAGAGACAT	G	873.14	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=6.837;DP=551;FS=0.000;HRun=0;HaplotypeScore=127.5853;InbreedingCoeff=0.6024;MQ=61.96;MQ0=5;MQRankSum=-0.346;QD=7.22;ReadPosRankSum=0.904;VQSLOD=2.2186;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:43.46:0,43,729	1/1:3,0:3:9.03:142,9,0	0/0:14,0:13:37.57:0,38,608	0/0:18,0:10:26.58:0,27,492	0/0:24,0:24:54.66:0,55,892	0/0:24,0:24:54.15:0,54,924	0/0:24,0:24:48.16:0,48,1149	0/0:31,0:31:76.51:0,77,1227	0/0:20,0:19:41.52:0,42,660	1/1:12,0:12:33.11:542,33,0	1/1:11,0:11:2.78:57,3,0	0/1:21,0:21:40.13:40,0,498	0/1:13,0:12:44.71:45,0,127	0/0:16,0:16:36.12:0,36,836	0/0:23,0:23:60.19:0,60,1258	0/0:8,0:8:20.70:0,21,359	1/1:2,29:31:8.65:165,9,0	0/0:17,0:17:42.54:0,43,627	0/0:17,0:17:44.25:0,44,699	0/0:31,0:30:66.21:0,66,1074	0/0:27,0:26:48.15:0,48,813	0/0:20,0:20:34.85:0,35,845	0/0:20,0:19:44.49:0,44,651	0/1:14,0:13:6.12:6,0,303	1/1:16,0:16:3.01:38,3,0	0/0:26,0:26:73.29:0,73,1454	0/0:26,0:26:69.69:0,70,1157	0/0:10,0:10:27.56:0,28,461
chr10	71798984	.	GACATAC	G	341.86	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.054;DP=541;FS=0.919;HRun=0;HaplotypeScore=109.3713;InbreedingCoeff=0.8724;MQ=64.42;MQ0=3;MQRankSum=1.849;QD=4.68;ReadPosRankSum=0.182;VQSLOD=2.0447;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:41.63:0,42,993	1/1:3,0:3:8.03:58,8,0	0/0:17,0:16:45.63:0,46,1188	0/0:19,0:11:30.10:0,30,856	0/0:24,0:24:48.02:0,48,1149	0/0:22,0:22:51.16:0,51,1279	0/0:20,0:20:48.16:0,48,1294	0/0:36,0:36:99:0,101,2263	0/0:18,0:17:36.03:0,36,817	1/1:1,0:12:16.06:251,16,0	1/1:11,0:11:2.91:41,3,0	0/0:21,0:21:41.47:0,41,850	0/0:14,0:13:23.50:0,23,349	0/0:15,0:15:36.12:0,36,985	0/0:22,0:22:60.14:0,60,1560	0/0:7,0:7:21.07:0,21,505	1/1:31,0:31:8.76:91,9,0	0/0:17,0:17:42.10:0,42,866	0/0:18,0:18:44.89:0,45,1063	0/0:28,0:28:66.20:0,66,1543	0/0:26,0:25:48.03:0,48,1120	0/0:21,0:21:59.57:0,60,1405	0/0:19,0:19:45.15:0,45,1054	0/0:14,0:13:24.55:0,25,495	1/1:0,16:16:3.01:48,3,0	0/0:25,0:25:60.17:0,60,1632	0/0:25,0:25:64.48:0,64,1302	0/0:11,0:11:25.26:0,25,473
chr10	71800123	.	T	TGG	4157.35	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-1.991;DP=603;FS=4.170;HRun=8;HaplotypeScore=94.6628;InbreedingCoeff=0.9707;MQ=75.27;MQ0=0;MQRankSum=-1.481;QD=19.99;ReadPosRankSum=0.353;VQSLOD=2.3996;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:27:47.80:202,48,0	1/1:9,0:15:9.01:86,9,0	0/0:22,0:22:45.65:0,46,501	0/0:23,0:24:39.49:0,39,411	0/0:29,0:29:87.24:0,87,969	0/0:26,0:26:71.82:0,72,783	0/0:14,0:14:36.10:0,36,401	0/0:25,0:25:42.08:0,42,468	0/0:27,0:27:72.16:0,72,793	1/1:13,1:19:21.06:264,21,0	1/1:10,0:17:14.78:160,15,0	1/1:4,10:14:30.53:450,31,0	1/1:1,15:16:36.12:571,36,0	0/0:12,0:12:33.08:0,33,368	0/0:21,0:21:57.12:0,57,626	0/0:21,0:21:54.13:0,54,602	1/1:8,1:19:15.02:144,15,0	0/0:4,0:14:24.59:0,25,108	0/0:15,0:15:39.09:0,39,435	0/0:40,0:40:99:0,114,1261	0/0:19,0:19:51.13:0,51,566	1/1:8,20:28:66.22:1030,66,0	1/1:4,18:22:35.92:572,36,0	1/1:2,14:18:39.13:613,39,0	1/1:11,0:13:6.01:66,6,0	0/0:34,0:35:67.03:0,67,885	0/0:33,0:32:81.21:0,81,902	0/0:18,0:18:54.15:0,54,602
chr10	71800213	.	AT	A	283.35	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.547;DP=625;FS=4.379;HRun=2;HaplotypeScore=94.1606;InbreedingCoeff=0.9922;MQ=79.64;MQ0=0;MQRankSum=-2.351;QD=28.33;ReadPosRankSum=0.906;VQSLOD=3.1687;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.20:0,66,1026	0/0:10,0:10:30.09:0,30,442	0/0:19,0:19:46.74:0,47,749	0/0:14,0:13:19.15:0,19,478	0/0:35,0:35:99:0,105,1674	0/0:37,0:37:99:0,111,1749	0/0:19,0:19:57.19:0,57,911	0/0:31,0:31:93.29:0,93,1423	0/0:19,0:19:57.18:0,57,882	0/0:26,0:26:75.25:0,75,1177	0/0:16,0:16:48.15:0,48,738	0/0:16,0:16:48.16:0,48,765	0/0:23,0:23:66.19:0,66,979	0/0:20,0:20:60.20:0,60,956	0/0:21,0:21:63.21:0,63,1006	0/0:27,0:27:81.28:0,81,1293	0/0:22,0:22:66.22:0,66,1047	1/1:0,10:10:27.09:377,27,0	0/0:14,0:14:39.13:0,39,620	0/0:29,0:29:87.27:0,87,1344	0/0:25,0:25:75.19:0,75,1122	0/0:20,0:20:60.19:0,60,928	0/0:29,0:29:87.30:0,87,1388	0/0:28,0:27:78.27:0,78,1246	0/0:20,0:20:60.20:0,60,949	0/0:34,0:34:99:0,99,1578	0/0:22,0:22:66.19:0,66,996	0/0:17,0:17:51.17:0,51,797
chr10	71802798	.	CTG	C	165.94	PASS	AB=0.879;AC=8;AF=0.143;AN=56;BaseQRankSum=7.141;DP=615;FS=15.290;HRun=0;HaplotypeScore=118.4237;InbreedingCoeff=0.2659;MQ=51.01;MQ0=9;MQRankSum=-1.679;QD=1.09;ReadPosRankSum=-0.840;VQSLOD=1.4115;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,1:35:14.65:37,0,15	0/0:4,0:3:6.02:0,6,116	1/1:11,0:2:5.61:45,6,0	0/0:30,1:8:1.49:0,1,82	0/0:26,0:26:63.09:0,63,1020	0/0:23,0:23:63.22:0,63,1189	0/0:12,0:12:33.10:0,33,604	0/0:38,0:35:98.57:0,99,1583	0/0:9,0:9:27.07:0,27,446	0/0:20,0:20:54.16:0,54,890	0/0:19,0:18:21.43:0,21,527	0/1:24,5:28:40.99:41,0,48	0/1:13,6:19:99:115,0,100	0/0:21,1:22:57.14:0,57,961	0/0:27,0:27:81.26:0,81,1508	0/0:21,1:22:63.18:0,63,1137	0/0:20,0:20:36.10:0,36,659	0/0:10,0:10:15.74:0,16,295	0/0:24,0:20:53.93:0,54,899	0/0:23,0:23:63.20:0,63,1181	0/0:32,0:31:75.18:0,75,1327	1/1:27,3:30:5.70:48,6,0	0/1:24,2:25:13.20:13,0,36	0/0:17,0:17:2.88:0,3,15	0/0:14,0:14:24.06:0,24,409	0/0:26,1:27:35.53:0,36,1321	0/0:31,0:31:93.20:0,93,1662	0/0:11,0:11:33.11:0,33,630
chr10	71802806	.	CTG	C	182.42	PASS	AB=0.979;AC=7;AF=0.125;AN=56;BaseQRankSum=6.922;DP=631;FS=10.598;HRun=0;HaplotypeScore=118.0520;InbreedingCoeff=0.1820;MQ=50.95;MQ0=12;MQRankSum=-1.391;QD=1.16;ReadPosRankSum=-1.227;VQSLOD=1.4150;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:38,1:38:17.94:23,0,18	0/0:3,0:3:6.02:0,6,115	0/0:12,0:2:6:0,6,58	0/0:31,1:6:7.25:0,7,140	0/0:25,0:25:60.09:0,60,1048	0/0:23,0:23:66.08:0,66,1147	0/0:15,0:15:42.06:0,42,641	0/0:35,0:32:93.28:0,93,1610	0/0:8,0:7:21.07:0,21,405	0/0:21,0:21:53.37:0,53,791	0/0:19,0:18:33.01:0,33,554	0/1:29,1:29:37.43:37,0,38	0/1:18,1:19:73.44:124,0,73	0/0:20,0:20:51.11:0,51,873	0/0:26,0:26:78.25:0,78,1469	0/0:21,1:22:63.19:0,63,1149	0/0:23,0:23:39.06:0,39,692	0/1:10,0:10:41.20:41,0,75	0/0:27,0:22:63.02:0,63,1018	0/0:25,0:25:69.17:0,69,1256	0/0:33,0:32:84.06:0,84,1317	1/1:28,0:28:2.71:25,3,0	0/1:31,0:30:1.25:57,0,1	0/0:16,1:17:1.82:0,2,5	0/0:18,0:18:27.06:0,27,453	0/0:29,0:29:78.82:0,79,1445	0/0:30,0:30:87.25:0,87,1577	0/0:11,0:11:33.04:0,33,583
chr10	71802808	.	GTCTC	G	176.93	PASS	AB=0.963;AC=6;AF=0.107;AN=56;BaseQRankSum=6.494;DP=638;FS=2.080;HRun=0;HaplotypeScore=137.3694;InbreedingCoeff=0.1185;MQ=52.03;MQ0=12;MQRankSum=1.351;QD=1.61;ReadPosRankSum=-3.219;VQSLOD=1.7883;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:12.57:0,13,37	0/0:3,0:3:6.02:0,6,151	0/0:10,0:2:6.02:0,6,80	0/0:35,0:7:10.46:0,10,192	0/0:26,0:26:60.08:0,60,1489	0/0:22,0:22:66.19:0,66,1544	0/0:14,0:14:39.13:0,39,915	0/0:35,0:32:93.26:0,93,2153	0/0:8,0:7:21.07:0,21,578	0/0:20,0:20:20.84:0,21,760	0/0:20,0:19:29.35:0,29,607	0/1:31,1:31:63.52:88,0,64	0/1:21,0:21:76.93:77,0,114	0/0:20,0:20:51.10:0,51,1151	0/0:26,0:26:78.27:0,78,2032	0/0:23,0:23:66.20:0,66,1683	0/0:23,0:23:38.82:0,39,809	0/1:9,0:9:34.20:34,0,72	0/0:25,0:20:60.20:0,60,1408	0/0:27,0:27:75.23:0,75,1864	0/0:34,0:33:81.23:0,81,1819	0/0:29,0:29:2.61:0,3,23	0/1:26,4:29:59.41:71,0,59	1/1:17,1:18:4.55:28,5,0	0/0:19,0:19:27:0,27,472	0/0:28,0:28:84.27:0,84,1958	0/0:30,0:30:84.29:0,84,2226	0/0:11,0:11:30.10:0,30,691
chr10	71802814	.	G	GTC	2248.56	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-6.167;DP=664;FS=1.150;HRun=0;HaplotypeScore=119.8668;InbreedingCoeff=0.6077;MQ=54.03;MQ0=12;MQRankSum=1.656;QD=9.10;ReadPosRankSum=0.164;VQSLOD=3.0159;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:42:0.19:0,0,0	1/1:0,5:5:6.02:102,6,0	0/0:14,0:6:9.01:0,9,101	0/0:42,0:11:14.52:0,15,143	0/0:28,0:28:60.19:0,60,778	0/0:20,0:20:54.16:0,54,688	0/0:14,0:14:36.12:0,36,467	0/0:38,0:35:78.24:0,78,989	0/0:10,0:9:27.06:0,27,323	1/1:4,16:20:41.97:676,42,0	1/1:3,23:26:30.10:510,30,0	0/1:31,0:30:35.62:36,0,44	0/1:21,0:21:63.57:64,0,86	0/0:18,0:18:39.09:0,39,493	0/0:28,0:28:75.24:0,75,974	0/0:23,0:23:63.20:0,63,819	1/1:1,24:25:35.98:612,36,0	0/0:11,0:11:23.68:0,24,187	0/0:26,0:21:54.17:0,54,687	0/0:28,0:28:72.23:0,72,935	0/0:28,0:27:69.22:0,69,896	0/1:29,0:29:0.11:1,0,0	0/1:29,0:28:13.77:14,0,50	0/0:17,1:18:2.98:0,3,21	1/1:0,17:17:24.08:408,24,0	0/0:27,0:27:66.20:0,66,857	0/0:31,0:31:87.24:0,87,1097	0/0:11,0:11:18.06:0,18,234
chr10	71802836	.	G	GTC	1026.25	PASS	AB=0.808;AC=10;AF=0.179;AN=56;BaseQRankSum=6.566;DP=722;FS=4.937;HRun=0;HaplotypeScore=132.5154;InbreedingCoeff=0.6406;MQ=61.62;MQ0=16;MQRankSum=0.261;QD=6.62;ReadPosRankSum=0.344;VQSLOD=2.9386;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,3:40:2.62:0,3,11	0/0:5,0:5:6.02:0,6,74	0/0:46,0:23:46.69:0,47,545	0/0:62,0:23:16.03:0,16,280	0/0:25,0:25:60.18:0,60,731	0/0:17,0:17:45.14:0,45,558	0/0:14,0:14:30.09:0,30,372	0/0:38,0:35:66.17:0,66,781	0/0:12,0:11:30.09:0,30,371	0/0:18,0:19:23.10:0,23,530	0/0:25,0:24:41.90:0,42,518	1/1:19,11:29:10.06:353,10,0	0/1:12,10:22:14.01:225,0,14	0/0:18,0:18:42.11:0,42,507	0/0:32,0:32:69.20:0,69,843	0/0:24,0:25:66.04:0,66,795	0/0:27,0:27:51.16:0,51,627	0/1:12,1:13:13.09:13,0,360	0/0:25,0:22:60.19:0,60,742	0/0:29,0:29:66.21:0,66,818	0/0:27,0:27:63.20:0,63,780	1/1:16,18:33:7.09:145,7,0	1/1:12,19:27:21.07:344,21,0	1/1:9,16:23:5.92:98,6,0	0/0:16,0:16:24.08:0,24,296	0/0:23,0:23:57.17:0,57,695	0/0:32,0:32:69.20:0,69,841	0/0:8,0:9:11.67:0,12,127
chr10	71803499	.	T	TAG	210.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.248;DP=629;FS=0.000;HRun=0;HaplotypeScore=83.4006;InbreedingCoeff=0.8795;MQ=60.06;MQ0=15;MQRankSum=0.880;QD=21.08;ReadPosRankSum=1.244;VQSLOD=3.5259;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:72.19:0,72,898	0/0:16,0:16:39.12:0,39,497	0/0:20,0:6:15.01:0,15,169	0/0:15,0:6:5.85:0,6,130	0/0:36,0:36:99:0,99,1260	0/0:22,0:22:51.16:0,51,649	0/0:16,0:16:33.11:0,33,420	0/0:42,0:39:84.25:0,84,1056	0/0:19,0:19:48.15:0,48,611	0/0:24,0:24:60.19:0,60,764	0/0:25,0:25:69.22:0,69,876	0/0:21,0:21:60.18:0,60,751	0/0:19,0:20:57.01:0,57,699	0/0:14,0:14:36.12:0,36,458	0/0:16,0:16:39.12:0,39,497	0/0:15,0:15:36.11:0,36,458	0/0:21,0:22:54.17:0,54,688	1/1:4,6:10:18.06:301,18,0	0/0:25,0:23:54.17:0,54,685	0/0:30,0:30:87.25:0,87,1081	0/0:24,0:24:69.22:0,69,878	0/0:24,0:24:51.12:0,51,631	0/0:25,0:25:60.19:0,60,764	0/0:19,0:19:48.15:0,48,606	0/0:21,0:21:57.17:0,57,713	0/0:26,0:26:63.20:0,63,802	0/0:34,0:34:81.21:0,81,989	0/0:10,0:10:24.06:0,24,292
chr10	71804163	.	CG	C	3620.96	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=12.589;DP=619;FS=3.769;HRun=2;HaplotypeScore=65.0420;InbreedingCoeff=0.9922;MQ=46.68;MQ0=66;MQRankSum=-4.942;QD=25.50;ReadPosRankSum=0.852;VQSLOD=3.3119;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,35:37:60.17:757,60,0	0/0:5,0:5:15.04:0,15,204	./.	./.	0/0:34,0:34:87.24:0,87,1251	0/0:26,0:25:60.16:0,60,870	0/0:20,0:18:48.15:0,48,694	0/0:27,0:24:63.21:0,63,939	0/0:22,0:22:60.07:0,60,897	0/0:21,0:19:57.19:0,57,851	0/0:11,0:11:30.10:0,30,448	1/1:2,14:16:36.06:443,36,0	1/1:0,22:22:51.16:660,51,0	0/0:22,0:22:57.18:0,57,826	0/0:27,0:27:75.20:0,75,1077	0/0:17,0:17:48.14:0,48,679	0/0:28,0:23:54.07:0,54,699	0/0:10,0:9:21.06:0,21,293	0/0:17,0:13:27.08:0,27,385	0/0:23,0:22:69.22:0,69,1010	0/0:40,0:36:60.17:0,60,854	1/1:4,25:27:66.11:828,66,0	1/1:4,17:21:40.69:534,41,0	1/1:2,13:12:32.96:399,33,0	0/0:16,0:16:45.12:0,45,632	0/0:33,0:32:93.31:0,93,1382	0/0:25,0:25:69.20:0,69,1006	0/0:6,0:6:15.05:0,15,221
chr10	71804240	.	AC	A	4463.02	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.736;DP=589;FS=2.684;HRun=3;HaplotypeScore=78.4199;InbreedingCoeff=0.9975;MQ=63.38;MQ0=1;MQRankSum=0.097;QD=32.82;ReadPosRankSum=1.460;VQSLOD=5.4010;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,39:39:99:1276,105,0	0/0:7,0:7:18.06:0,18,259	0/0:22,0:20:57.19:0,57,820	0/0:20,0:18:49.71:0,50,683	0/0:29,0:29:84.20:0,84,1190	0/0:25,0:25:75.25:0,75,1080	0/0:19,0:19:57.19:0,57,819	0/0:29,0:29:87.28:0,87,1237	0/0:17,0:17:51.17:0,51,734	0/0:18,0:18:54.14:0,54,754	0/0:18,0:18:48.63:0,49,691	1/1:2,14:16:39.06:453,39,0	1/1:0,18:18:54.17:669,54,0	0/0:25,0:25:75.25:0,75,1079	0/0:24,0:24:72.24:0,72,1036	0/0:24,0:24:69.23:0,69,993	0/0:23,0:23:69.23:0,69,994	0/0:8,0:7:21.07:0,21,302	0/0:15,0:15:45.15:0,45,647	0/0:22,0:22:66.21:0,66,932	0/0:19,0:19:57.16:0,57,783	1/1:1,25:24:69.17:838,69,0	1/1:0,23:23:66.21:818,66,0	1/1:1,11:12:33.10:409,33,0	0/0:23,0:23:69.16:0,69,968	0/0:24,0:24:66.21:0,66,934	0/0:28,0:28:78.26:0,78,1123	0/0:14,0:14:42.14:0,42,604
chr10	71804627	.	T	TA	5567.89	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=17.186;DP=704;FS=1.972;HRun=3;HaplotypeScore=116.3305;InbreedingCoeff=0.9982;MQ=81.21;MQ0=0;MQRankSum=-0.750;QD=34.16;ReadPosRankSum=2.959;VQSLOD=4.4685;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,36:41:99:1305,99,0	0/0:10,0:10:28.82:0,29,154	0/0:23,0:23:63.19:0,63,756	0/0:31,0:31:78.22:0,78,913	0/0:31,0:31:81.25:0,81,972	0/0:24,0:24:63.16:0,63,731	0/0:22,0:22:57.13:0,57,668	0/0:29,0:29:87.27:0,87,1044	0/0:43,0:43:99:0,114,1343	0/0:20,0:20:50.82:0,51,257	0/0:26,0:26:68.56:0,69,346	1/1:2,26:28:75.16:967,75,0	1/1:3,23:26:69.23:925,69,0	0/0:19,0:19:57.17:0,57,684	0/0:22,0:22:63.18:0,63,744	0/0:23,0:23:69.21:0,69,828	0/0:23,0:23:66.37:0,66,356	0/0:16,0:14:40.44:0,40,219	0/0:15,0:15:45.14:0,45,540	0/0:28,0:28:75.23:0,75,900	0/0:53,0:53:99:0,147,1762	1/1:3,19:21:50.90:683,51,0	1/1:0,21:21:54.18:724,54,0	1/1:0,25:25:72.24:962,72,0	0/0:28,0:28:50.59:0,51,359	0/0:27,0:27:75.10:0,75,879	0/0:22,0:21:63.19:0,63,756	0/0:6,0:6:18.06:0,18,216
chr10	71805018	.	AG	A	5568.81	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.506;DP=638;FS=5.315;HRun=2;HaplotypeScore=66.3977;InbreedingCoeff=0.9990;MQ=75.86;MQ0=0;MQRankSum=0.351;QD=36.64;ReadPosRankSum=3.451;VQSLOD=5.5952;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,41:42:99:1480,114,0	0/0:12,0:12:36.12:0,36,540	0/0:27,0:27:78.22:0,78,1141	0/0:19,0:19:51.09:0,51,723	0/0:25,0:25:75.24:0,75,1096	0/0:26,0:26:78.26:0,78,1168	0/0:18,0:18:51.15:0,51,725	0/0:29,0:29:84.28:0,84,1240	0/0:24,0:24:72.23:0,72,1058	0/0:25,0:25:75.25:0,75,1124	0/0:24,0:24:72.24:0,72,1061	1/1:0,23:23:69.22:896,69,0	1/1:0,26:26:75.24:973,75,0	0/0:16,0:16:48.16:0,48,719	0/0:22,0:22:63.19:0,63,906	0/0:19,0:19:57.18:0,57,836	0/0:12,0:12:36.12:0,36,539	0/0:10,0:10:30.10:0,30,449	0/0:20,0:20:60.20:0,60,896	0/0:26,0:26:78.25:0,78,1149	0/0:43,0:43:99:0,129,1886	1/1:0,25:25:75.24:973,75,0	1/1:0,8:8:21.07:273,21,0	1/1:0,28:28:75.24:974,75,0	0/0:23,0:23:69.23:0,69,1034	0/0:36,0:36:99:0,108,1597	0/0:18,0:18:54.18:0,54,809	0/0:12,0:12:36.12:0,36,539
chr10	71805741	.	CT	C	951.19	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=0.839;DP=333;FS=1.705;HRun=9;HaplotypeScore=58.4414;InbreedingCoeff=0.8459;MQ=71.96;MQ0=4;MQRankSum=3.141;QD=17.29;ReadPosRankSum=1.839;VQSLOD=3.8441;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:10:13.96:0,14,68	0/0:2,0:8:17.04:0,17,84	0/0:25,0:17:21.08:0,21,228	0/0:18,0:12:14.87:0,15,156	1/1:8,21:30:64.95:571,65,0	0/0:6,0:6:9.03:0,9,104	0/0:5,0:5:11.98:0,12,113	0/0:13,0:12:21.05:0,21,231	1/1:1,8:9:21.01:192,21,0	0/0:2,0:13:31.42:0,31,178	0/0:4,0:9:14.20:0,14,73	0/0:3,0:5:8.56:0,9,44	0/0:4,0:7:13.93:0,14,67	0/0:10,0:10:27.07:0,27,304	0/0:6,0:6:15.04:0,15,173	0/0:14,0:14:33.10:0,33,381	0/0:4,0:8:14.33:0,14,76	1/1:3,13:15:36.02:329,36,0	0/0:17,0:17:39.10:0,39,438	0/0:14,1:15:11.66:0,12,388	0/0:14,0:14:33.10:0,33,380	0/0:3,0:5:8.66:0,9,51	0/0:2,0:8:17.15:0,17,87	0/0:2,0:5:8.12:0,8,38	0/0:5,0:12:25.57:0,26,163	0/0:14,0:14:39.09:0,39,437	0/0:15,0:15:36.02:0,36,386	0/0:11,0:11:13.42:0,13,201
chr10	71805753	.	GTT	G	1254.29	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=7.654;DP=269;FS=22.303;HRun=10;HaplotypeScore=49.1541;InbreedingCoeff=0.8783;MQ=64.27;MQ0=5;MQRankSum=-7.664;QD=16.95;ReadPosRankSum=2.342;VQSLOD=0.4270;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,3:5:9.02:99,9,0	1/1:1,4:5:12.03:134,12,0	0/0:16,0:9:9.03:0,9,127	0/0:13,0:7:8.72:0,9,129	0/0:23,0:22:60.20:0,60,952	0/0:5,0:5:9.03:0,9,143	0/0:4,0:4:12.04:0,12,190	0/0:12,0:11:27.09:0,27,428	0/0:6,0:6:15.05:0,15,238	1/1:4,8:12:21.04:234,21,0	1/1:1,6:6:12.03:134,12,0	1/1:3,3:6:9.01:99,9,0	1/1:1,3:4:12.03:133,12,0	0/0:11,0:11:27.08:0,27,405	0/0:4,0:4:12.04:0,12,190	0/0:11,0:11:21.06:0,21,306	1/1:2,5:7:8.85:100,9,0	0/0:15,0:14:30.10:0,30,476	0/0:12,0:12:24.08:0,24,375	0/0:15,0:15:36.08:0,36,522	0/0:14,0:12:30.10:0,30,476	1/1:3,0:3:3:33,3,0	1/1:2,6:7:15.04:165,15,0	1/1:1,3:4:6.02:65,6,0	1/1:3,10:11:23.16:266,23,0	0/0:14,0:14:39.12:0,39,596	0/0:10,0:10:24.08:0,24,379	0/0:9,0:10:21.07:0,21,333
chr10	71813205	.	A	AT	69.06	PASS	AB=0.966;AC=7;AF=0.194;AN=36;BaseQRankSum=3.385;DP=873;DS;FS=13.954;HRun=0;HaplotypeScore=17.2496;InbreedingCoeff=-0.0630;MQ=15.14;MQ0=316;MQRankSum=-0.230;QD=0.30;ReadPosRankSum=3.339;VQSLOD=-0.2983;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:50,0:15:3:25,3,0	0/1:27,1:13:24.22:24,0,129	./.	./.	0/0:32,0:9:11.92:0,12,102	0/0:25,0:6:15.04:0,15,193	0/0:29,0:8:8.95:0,9,82	./.	./.	0/0:24,0:5:5.98:0,6,61	0/0:23,0:5:5.95:0,6,42	0/1:19,2:10:49.78:66,0,50	0/1:53,0:18:3.72:4,0,17	./.	0/0:35,0:8:24.06:0,24,315	0/1:46,1:12:30.19:30,0,74	0/0:48,0:18:8.99:0,9,103	0/0:39,0:6:2.97:0,3,20	./.	0/0:44,0:16:2.98:0,3,22	0/1:34,1:9:27.43:27,0,52	0/0:31,0:5:15.04:0,15,185	0/0:37,0:10:12.01:0,12,146	0/0:25,0:7:9.03:0,9,125
chr10	71815097	.	T	TA	4894.07	PASS	AB=0.933;AC=26;AF=0.464;AN=56;BaseQRankSum=-11.981;DP=411;FS=1.079;HRun=8;HaplotypeScore=37.0639;InbreedingCoeff=0.8516;MQ=64.18;MQ0=2;MQRankSum=-0.667;QD=25.10;ReadPosRankSum=1.266;VQSLOD=5.1468;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:75.22:866,75,0	1/1:0,10:10:27.08:312,27,0	0/1:19,0:7:16.16:16,0,69	0/0:20,0:13:15.42:0,15,279	0/0:22,0:22:66.02:0,66,599	0/0:8,0:8:21.01:0,21,192	0/0:6,0:6:18.01:0,18,165	0/0:24,0:24:57.01:0,57,521	0/0:9,0:9:24.01:0,24,220	1/1:0,9:9:27.08:311,27,0	1/1:2,9:11:27.08:311,27,0	1/1:2,16:18:39.12:450,39,0	1/1:0,14:14:39.12:450,39,0	0/0:11,0:11:29.98:0,30,264	0/0:19,0:19:54.03:0,54,494	0/0:10,0:10:30.02:0,30,275	1/1:1,15:16:42.12:483,42,0	1/1:0,7:7:21.06:242,21,0	0/0:20,0:20:57.03:0,57,521	0/0:17,0:17:48.03:0,48,439	0/0:23,0:23:69.04:0,69,632	1/1:0,12:12:33.10:381,33,0	1/1:4,13:17:36.11:415,36,0	1/1:2,6:8:18.05:208,18,0	1/1:0,14:14:36.11:415,36,0	0/1:11,2:13:33.23:33,0,235	0/0:18,0:18:54.02:0,54,490	0/0:9,0:9:24.01:0,24,220
chr10	71815577	.	A	AT	4520.80	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.354;DP=641;FS=0.360;HRun=8;HaplotypeScore=69.6485;InbreedingCoeff=0.9903;MQ=71.73;MQ0=0;MQRankSum=0.973;QD=29.55;ReadPosRankSum=0.245;VQSLOD=4.8720;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,45:48:99:1524,132,0	0/0:12,0:12:32.99:0,33,293	0/0:11,0:10:15.01:0,15,137	0/0:13,0:13:13.50:0,13,157	0/0:18,0:18:45:0,45,412	0/0:17,0:16:45.01:0,45,407	0/0:24,0:24:63.03:0,63,576	0/0:33,0:33:72.02:0,72,659	0/0:28,0:28:69.02:0,69,631	0/0:32,0:32:84.02:0,84,763	0/0:30,0:30:81.03:0,81,740	1/1:0,22:22:63.19:727,63,0	1/1:3,14:17:39.12:450,39,0	0/0:21,0:21:57.03:0,57,522	0/0:19,0:19:51.02:0,51,467	0/0:21,0:21:57.02:0,57,517	0/0:26,0:26:60.02:0,60,549	0/0:10,0:10:27.01:0,27,247	0/0:20,0:20:51.01:0,51,466	0/0:35,0:35:96.04:0,96,877	0/0:28,0:28:75.04:0,75,686	1/1:6,15:21:42.08:470,42,0	1/1:3,21:24:60.18:692,60,0	1/1:2,19:21:57.17:658,57,0	0/0:24,0:25:68.07:0,68,610	0/0:28,0:28:69.01:0,69,625	0/0:31,0:31:81.04:0,81,741	0/0:6,0:6:18.01:0,18,165
chr10	71818322	.	GA	G	4199.90	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.882;DP=540;FS=1.814;HRun=2;HaplotypeScore=53.9000;InbreedingCoeff=0.9990;MQ=78.85;MQ0=0;MQRankSum=0.458;QD=33.60;ReadPosRankSum=1.814;VQSLOD=3.6420;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:75.24:973,75,0	0/0:7,0:7:21.07:0,21,315	0/0:20,0:20:59.38:0,59,779	0/0:23,0:23:55.67:0,56,771	0/0:20,0:20:56.97:0,57,797	0/0:18,0:18:54.18:0,54,805	0/0:21,0:21:50.45:0,50,783	0/0:27,0:27:78.23:0,78,1128	0/0:17,0:17:48.16:0,48,719	0/0:18,0:18:51.17:0,51,748	0/0:12,0:12:36.12:0,36,537	1/1:0,24:24:63.20:818,63,0	1/1:2,23:25:57.18:738,57,0	0/0:11,0:11:33.11:0,33,495	0/0:20,0:20:60.13:0,60,854	0/0:28,0:27:78.23:0,78,1112	0/0:20,0:20:60.19:0,60,878	0/0:12,0:12:36.07:0,36,512	0/0:15,0:15:45.15:0,45,672	0/0:26,0:26:78.25:0,78,1145	0/0:27,0:27:78.25:0,78,1140	1/1:0,17:17:51.17:659,51,0	1/1:1,16:17:48.16:623,48,0	1/1:0,14:14:30.10:389,30,0	0/0:22,0:22:66.22:0,66,987	0/0:15,0:15:45.15:0,45,674	0/0:22,0:21:66.22:0,66,974	0/0:14,0:14:42.14:0,42,625
chr10	71818654	.	G	GT	4850.03	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=1.466;DP=637;FS=2.306;HRun=7;HaplotypeScore=71.5584;InbreedingCoeff=0.9909;MQ=78.08;MQ0=1;MQRankSum=-1.302;QD=21.75;ReadPosRankSum=3.292;VQSLOD=4.7417;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:96.14:0,96,927	1/1:0,0:9:22.89:117,23,0	0/0:27,0:27:47.61:0,48,465	0/0:15,0:15:23.57:0,24,271	0/0:28,0:28:72.09:0,72,688	0/0:21,0:21:57.07:0,57,543	0/0:15,0:15:39.04:0,39,370	0/0:36,0:36:96.08:0,96,897	0/0:23,0:23:69.09:0,69,660	1/1:3,0:23:55.17:286,55,0	1/1:2,0:20:51.78:266,52,0	1/1:2,16:18:45.14:544,45,0	1/1:1,19:20:57.17:689,57,0	0/0:20,0:20:60.09:0,60,575	0/0:28,0:28:75.10:0,75,717	0/0:17,0:17:51.05:0,51,476	1/1:4,0:31:68.97:351,69,0	1/1:3,18:21:48.15:580,48,0	0/0:24,0:24:60.08:0,60,573	0/0:29,0:29:84.13:0,84,810	0/0:19,0:19:50.91:0,51,472	1/1:1,14:15:42.13:503,42,0	1/1:1,22:24:66.20:787,66,0	1/1:3,14:17:36.11:435,36,0	1/1:1,1:24:57.50:292,58,0	0/0:39,0:39:99:0,99,943	0/0:29,0:28:87.13:0,87,834	0/0:5,0:5:9.01:0,9,87
chr10	71819486	.	GA	G	10427.25	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=15.181;DP=664;FS=6.470;HRun=2;HaplotypeScore=65.3911;InbreedingCoeff=0.9996;MQ=80.84;MQ0=0;MQRankSum=-3.499;QD=35.83;ReadPosRankSum=4.461;VQSLOD=5.3445;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,56:57:99:2024,156,0	1/1:0,10:10:27.09:350,27,0	0/0:14,0:14:36.12:0,36,527	0/0:25,0:25:66.19:0,66,944	0/0:22,0:22:60.19:0,60,879	0/0:12,0:12:36.12:0,36,539	0/0:26,0:26:78.24:0,78,1125	0/0:34,0:34:96.33:0,96,1438	0/0:23,0:23:69.18:0,69,951	1/1:0,32:32:93.30:1205,93,0	1/1:1,25:26:69.22:894,69,0	1/1:0,22:22:60.20:779,60,0	1/1:1,22:23:60.20:779,60,0	0/0:17,0:17:45.15:0,45,674	0/0:26,0:26:78.26:0,78,1167	0/0:14,0:14:42.14:0,42,629	1/1:0,27:27:75.24:973,75,0	1/1:0,12:12:30.10:389,30,0	0/0:25,0:25:75.22:0,75,1077	0/0:39,0:39:99:0,114,1647	0/0:33,0:33:96.33:0,96,1434	1/1:0,21:21:60.20:778,60,0	1/1:0,24:24:72.23:933,72,0	1/1:0,21:21:54.18:701,54,0	1/1:0,16:16:48.16:623,48,0	0/0:26,0:26:75.25:0,75,1107	0/0:28,0:28:81.25:0,81,1175	0/0:9,0:9:27.09:0,27,404
chr10	71821017	.	G	GC	5636.79	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-14.113;DP=701;FS=1.080;HRun=7;HaplotypeScore=65.9528;InbreedingCoeff=0.9989;MQ=83.32;MQ0=0;MQRankSum=-1.489;QD=29.06;ReadPosRankSum=1.814;VQSLOD=5.4868;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,37:48:93.29:1124,93,0	0/0:11,0:11:33.04:0,33,313	0/0:35,0:35:93.08:0,93,875	0/0:23,0:23:51.03:0,51,479	0/0:24,0:24:66.10:0,66,637	0/0:29,0:29:72.11:0,72,695	0/0:23,0:23:63.10:0,63,608	0/0:24,0:24:45.06:0,45,435	0/0:31,0:31:84.13:0,84,811	0/0:28,0:28:72.11:0,72,695	0/0:23,0:23:51.06:0,51,492	1/1:2,30:32:87.22:1035,87,0	1/1:5,27:33:75.22:906,75,0	0/0:23,0:23:63.08:0,63,603	0/0:37,0:37:99:0,105,1007	0/0:20,0:20:54.08:0,54,522	0/0:18,0:18:45.07:0,45,435	0/0:9,0:9:26.99:0,27,251	0/0:17,0:17:48.07:0,48,461	0/0:22,0:22:66.09:0,66,632	0/0:40,0:40:99:0,111,1072	1/1:1,30:31:72.22:870,72,0	1/1:0,19:19:54.17:652,54,0	1/1:1,30:31:87.27:1051,87,0	0/0:17,0:17:48.07:0,48,463	0/0:27,0:27:69.07:0,69,658	0/0:16,0:16:42.06:0,42,406	0/0:10,0:10:21.02:0,21,203
chr10	71821891	.	T	TA	385.15	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.104;DP=531;FS=4.818;HRun=10;HaplotypeScore=66.7118;InbreedingCoeff=0.8092;MQ=73.68;MQ0=0;MQRankSum=-1.477;QD=19.26;ReadPosRankSum=1.416;VQSLOD=4.7374;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:59.91:0,60,489	0/0:4,0:4:11.97:0,12,96	0/0:11,0:11:13.19:0,13,99	0/0:15,0:15:3.67:0,4,191	0/0:37,0:37:89.73:0,90,725	0/0:15,0:15:41.95:0,42,345	0/0:10,0:11:28.99:0,29,228	0/0:24,0:24:50.91:0,51,416	0/0:22,0:23:58.96:0,59,474	0/0:30,0:30:71.89:0,72,587	0/0:34,0:34:80.88:0,81,662	0/0:27,0:27:65.90:0,66,540	0/0:10,0:10:29.95:0,30,243	0/0:5,0:5:14.97:0,15,120	0/0:21,0:21:56.89:0,57,463	0/0:26,0:26:68.83:0,69,557	0/0:11,0:11:26.97:0,27,222	1/1:3,17:20:45.11:480,45,0	0/0:14,0:14:29.96:0,30,246	0/0:26,0:26:68.92:0,69,567	0/0:11,0:11:29.93:0,30,240	0/0:29,0:30:86.12:0,86,696	0/0:16,0:16:38.94:0,39,319	0/0:8,0:9:26.01:0,26,203	0/0:18,0:18:50.94:0,51,419	0/0:19,0:20:43.97:0,44,350	0/0:30,0:30:70.70:0,71,568	0/0:12,0:12:32.94:0,33,267
chr10	71823720	.	A	AAGT	1303.27	PASS	AB=1.000;AC=25;AF=0.463;AN=54;BaseQRankSum=3.397;DP=222;FS=3.308;HRun=0;HaplotypeScore=31.6297;InbreedingCoeff=0.7956;MQ=77.68;MQ0=10;MQRankSum=-0.771;QD=15.89;ReadPosRankSum=1.243;VQSLOD=2.7032;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:14:27.80:234,28,0	1/1:1,0:1:2.99:24,3,0	0/0:26,0:8:16.80:0,17,165	0/0:15,0:7:11.14:0,11,129	0/0:3,0:3:9:0,9,78	0/0:7,0:7:18.01:0,18,211	0/0:11,0:11:29.66:0,30,258	0/0:14,0:12:36.03:0,36,331	0/0:9,0:9:26.58:0,27,240	1/1:4,0:4:12.02:119,12,0	1/1:6,0:5:14.98:125,15,0	1/1:9,0:9:26.71:235,27,0	1/1:1,7:8:3.01:73,3,0	0/0:7,0:7:21:0,21,185	0/0:7,0:7:20.96:0,21,203	0/0:8,0:8:24.01:0,24,241	1/1:7,0:7:14.94:117,15,0	1/1:6,0:6:17.96:146,18,0	0/0:7,0:7:20.93:0,21,177	0/0:4,0:4:12:0,12,104	0/0:18,0:18:53.95:0,54,484	1/1:7,0:7:17.98:153,18,0	1/1:3,0:3:9:120,9,0	1/1:0,10:10:3.01:73,3,0	1/1:3,0:3:8.97:73,9,0	0/1:4,0:4:15.98:16,0,71	0/0:4,0:4:11.99:0,12,103	./.
chr10	71824906	.	CAG	C	163.43	PASS	AB=0.961;AC=24;AF=0.500;AN=48;BaseQRankSum=3.065;DP=512;FS=23.307;HRun=0;HaplotypeScore=75.7929;InbreedingCoeff=0.2839;MQ=59.18;MQ0=12;MQRankSum=-0.369;QD=0.72;ReadPosRankSum=-0.814;VQSLOD=-0.3455;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:27:0.47:1,0,0	./.	./.	./.	1/1:10,0:10:5.29:22,5,0	1/1:19,0:18:2.85:18,3,0	0/0:22,0:22:6.17:0,6,55	0/0:29,0:26:0:0,0,0	0/0:17,0:17:0.92:0,1,79	1/1:15,0:15:8.74:42,9,0	0/1:12,0:11:7.09:8,0,7	1/1:16,0:15:6.32:47,6,0	0/1:7,1:8:4.28:48,0,4	0/0:20,0:20:11.95:0,12,106	0/1:20,1:20:27.32:27,0,37	0/0:20,0:20:19:0,19,254	1/1:13,4:16:2.48:31,2,0	1/1:15,0:21:2.84:14,3,0	0/0:17,0:17:1.12:0,1,116	1/1:15,0:15:2.21:7,2,0	0/0:29,0:29:9.62:0,10,77	1/1:14,0:14:2.37:8,2,0	0/0:22,0:24:1.70:0,2,23	0/0:22,0:23:8.96:0,9,75	1/1:13,0:13:2.80:13,3,0	0/1:17,0:17:16.16:16,0,38	0/0:24,0:24:7.37:0,7,150	./.
chr10	71825997	.	GTGA	G	41.30	PASS	AC=4;AF=0.080;AN=50;BaseQRankSum=3.414;DP=594;FS=10.025;HRun=0;HaplotypeScore=88.4606;InbreedingCoeff=0.8264;MQ=82.98;MQ0=9;MQRankSum=-3.309;QD=3.44;ReadPosRankSum=-1.247;VQSLOD=0.9751;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.26:0,84,2045	0/0:5,0:5:15.05:0,15,369	0/0:32,0:32:92.53:0,93,2061	0/0:20,0:21:56.88:0,57,1218	0/0:21,0:21:48.16:0,48,1181	0/0:28,0:28:81.26:0,81,1857	0/0:26,0:26:78.25:0,78,1852	0/0:30,0:30:86.70:0,87,2022	0/0:29,0:29:87.30:0,87,2025	0/0:25,0:24:72.25:0,72,1775	0/0:27,0:27:68.82:0,69,1573	./.	./.	0/0:23,0:23:69.22:0,69,1610	0/0:29,0:29:87.30:0,87,2063	0/0:22,0:21:66.23:0,66,1594	0/0:35,0:31:90.31:0,90,2057	0/0:25,0:25:75.20:0,75,1712	0/0:21,0:21:63.22:0,63,1536	0/0:23,0:23:63.20:0,63,1464	0/0:19,0:19:57.16:0,57,1280	1/1:0,6:1:3.01:46,3,0	1/1:1,5:3:6.02:92,6,0	./.	0/0:24,0:24:60.21:0,60,1450	0/0:17,0:17:51.18:0,51,1236	0/0:35,0:35:99:0,105,2479	0/0:12,0:12:30.07:0,30,619
chr10	71826545	.	ATTTTGCATTTT	A	1097.57	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.154;DP=667;FS=5.541;HRun=0;HaplotypeScore=198.8626;InbreedingCoeff=0.9993;MQ=72.30;MQ0=0;MQRankSum=-6.137;QD=43.90;ReadPosRankSum=1.585;VQSLOD=2.7751;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:24:41.94:1192,42,0	0/0:12,0:12:36.12:0,36,1964	0/0:25,0:25:75.23:0,75,3715	0/0:12,0:11:33.11:0,33,1695	0/0:33,0:33:99:0,99,5394	0/0:30,0:29:87.30:0,87,4874	0/0:26,0:26:78.25:0,78,4099	0/0:31,0:31:93.31:0,93,5187	0/0:26,0:26:66.23:0,66,3775	0/0:26,0:26:75.26:0,75,4146	0/0:28,0:28:81.28:0,81,4083	0/0:21,0:21:57.18:0,57,3044	0/0:26,0:26:57.17:0,57,2850	0/0:14,0:14:42.14:0,42,2344	0/0:23,0:23:63.22:0,63,3704	0/0:21,0:21:54.19:0,54,3029	0/0:21,0:21:60.21:0,60,3324	0/0:17,0:17:51.18:0,51,2945	0/0:17,0:17:51.16:0,51,2705	0/0:42,0:42:99:0,126,6982	0/0:19,0:19:57.17:0,57,3114	0/0:24,0:23:69.24:0,69,3799	0/0:32,0:32:93.32:0,93,5115	0/0:32,0:32:96.33:0,96,5271	0/0:18,0:17:51.18:0,51,2877	0/0:25,0:25:75.25:0,75,4133	0/0:30,0:30:81.75:0,82,4636	0/0:11,0:11:33.11:0,33,1924
chr10	71827515	.	TTGTGTGTGTGTGTGTGTGTGTGTGTGTG	T	3627.26	PASS	AB=0.809;AC=10;AF=0.179;AN=56;BaseQRankSum=5.165;DP=595;FS=1.807;HRun=0;HaplotypeScore=331.1844;InbreedingCoeff=0.7081;MQ=61.91;MQ0=26;MQRankSum=-5.720;QD=28.79;ReadPosRankSum=1.814;VQSLOD=1.8913;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:48.16:0,48,2261	1/1:7,3:10:9.03:649,9,0	0/0:43,0:26:9.03:0,9,282	0/0:29,0:14:3.01:0,3,45	0/0:23,0:23:24.08:0,24,2009	0/0:13,0:13:13.60:0,14,832	0/0:18,0:18:33.11:0,33,2643	0/0:24,0:22:33.11:0,33,1385	0/0:14,0:14:24.05:0,24,1712	1/1:21,1:24:20.98:605,21,0	1/1:11,10:21:12.04:866,12,0	0/0:14,0:21:30.10:0,30,1773	0/0:11,0:17:12.04:0,12,1084	0/0:18,0:18:30.10:0,30,3021	0/0:13,0:15:33.10:0,33,3221	0/0:17,0:16:18.53:0,19,1451	0/1:12,13:21:99:208,0,336	0/0:16,0:20:27.56:0,28,2819	0/0:12,0:13:12.04:0,12,1247	0/0:17,0:18:36.12:0,36,1982	0/0:25,0:23:42.12:0,42,2601	0/0:20,0:20:27.09:0,27,1756	0/0:15,0:20:18.06:0,18,1225	0/0:21,0:27:45.15:0,45,3390	1/1:6,15:19:18.06:1299,18,0	0/1:23,0:20:0.85:1,0,2429	0/0:14,0:15:27.09:0,27,1680	0/0:8,0:10:21.07:0,21,1951
chr10	71829231	.	C	CAA	6925.09	PASS	AB=0.729;AC=15;AF=0.268;AN=56;BaseQRankSum=-5.966;DP=807;FS=3.328;HRun=7;HaplotypeScore=85.8947;InbreedingCoeff=0.5424;MQ=45.58;MQ0=64;MQRankSum=-6.246;QD=20.01;ReadPosRankSum=1.115;VQSLOD=3.0578;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:71.42:0,71,809	1/1:0,9:9:21.06:320,21,0	0/0:30,0:16:17.58:0,18,444	0/0:24,0:12:35.97:0,36,398	0/0:29,0:28:78.23:0,78,908	0/0:20,0:19:48.14:0,48,553	0/0:17,0:15:36.09:0,36,408	0/0:27,0:24:72.16:0,72,815	0/0:29,0:28:78.23:0,78,908	1/1:4,27:36:99:1462,99,0	1/1:5,16:22:60.12:869,60,0	0/1:23,13:33:99:408,0,541	0/1:22,17:37:99:592,0,533	0/0:27,0:26:69.20:0,69,798	0/0:24,0:22:45.13:0,45,524	0/0:24,0:23:63.19:0,63,733	1/1:4,25:32:81.25:1252,81,0	0/0:27,0:24:54.10:0,54,612	0/0:20,0:19:51.12:0,51,580	0/0:38,0:38:84.21:0,84,951	0/0:15,0:14:36.11:0,36,419	0/1:22,12:31:99:355,0,611	0/1:25,20:39:99:577,0,692	0/1:31,11:40:99:381,0,831	1/1:6,9:19:57.06:709,57,0	0/0:27,0:26:75.14:0,75,844	0/0:45,0:44:99:0,114,1325	0/0:10,0:10:27.08:0,27,314
chr10	71834150	.	CA	C	1649.52	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.302;DP=720;FS=5.279;HRun=2;HaplotypeScore=78.2438;InbreedingCoeff=0.9818;MQ=61.90;MQ0=2;MQRankSum=-2.385;QD=20.88;ReadPosRankSum=0.838;VQSLOD=3.5554;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,157,2335	1/1:0,5:3:9.03:112,9,0	0/0:25,0:23:60.20:0,60,886	0/0:16,0:15:39.10:0,39,550	0/0:24,0:24:72.23:0,72,1059	0/0:16,0:16:48.16:0,48,716	0/0:29,0:29:87.25:0,87,1279	0/0:24,0:24:69.23:0,69,1018	0/0:24,0:24:72.24:0,72,1077	1/1:1,15:8:18.06:223,18,0	1/1:3,14:13:24.07:296,24,0	0/0:44,0:44:99:0,123,1802	0/0:28,0:28:81.26:0,81,1192	0/0:41,0:41:99:0,111,1661	0/0:35,0:35:99:0,99,1484	0/0:16,0:16:48.16:0,48,717	1/1:0,31:31:78.25:966,78,0	0/0:23,0:23:63.17:0,63,893	0/0:17,0:17:48.16:0,48,718	0/0:11,0:11:27.09:0,27,405	0/0:68,0:68:99:0,202,2910	0/0:15,0:15:45.14:0,45,655	0/0:20,0:20:57.19:0,57,849	0/0:47,0:47:99:0,141,2082	1/1:1,9:8:18.06:223,18,0	0/0:27,0:27:75.20:0,75,1074	0/0:21,0:21:60.20:0,60,894	0/0:14,0:14:39.13:0,39,584
chr10	71835113	.	TA	T	2701.89	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.720;DP=682;FS=0.000;HRun=7;HaplotypeScore=78.5124;InbreedingCoeff=0.9786;MQ=74.30;MQ0=0;MQRankSum=-1.646;QD=26.75;ReadPosRankSum=1.722;VQSLOD=4.2521;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,120,1496	1/1:0,10:10:27.06:275,27,0	0/0:17,1:18:18.01:0,18,513	0/0:23,1:24:49.66:0,50,516	0/0:33,0:33:93.29:0,93,1152	0/0:31,0:31:84.27:0,84,1057	0/0:19,0:19:57.16:0,57,692	0/0:26,0:26:69.22:0,69,868	0/0:20,0:20:54.14:0,54,652	1/1:1,20:21:60.14:612,60,0	1/1:1,25:26:69.15:704,69,0	0/0:17,0:17:48.15:0,48,603	0/0:28,0:28:75.22:0,75,929	0/0:21,0:21:63.20:0,63,792	0/0:34,0:34:90.29:0,90,1129	0/0:21,0:21:60.19:0,60,755	1/1:1,23:24:69.16:704,69,0	0/0:13,0:13:39.12:0,39,489	0/0:26,0:26:72.20:0,72,890	0/0:31,0:31:84.27:0,84,1056	0/0:22,0:22:66.20:0,66,818	0/0:28,0:28:78.25:0,78,981	0/0:28,0:28:72.23:0,72,906	0/0:22,0:22:66.15:0,66,799	1/1:1,19:20:57.13:582,57,0	0/0:33,3:36:7.45:0,7,1020	0/0:31,0:31:90.28:0,90,1119	0/0:7,0:7:21.07:0,21,264
chr10	71838142	.	A	AC	1920.94	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=8.762;DP=315;FS=4.942;HRun=0;HaplotypeScore=49.6328;InbreedingCoeff=0.9455;MQ=64.05;MQ0=0;MQRankSum=-2.007;QD=35.57;ReadPosRankSum=1.079;VQSLOD=3.1160;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,4:4:12.04:182,12,0	0/0:10,0:9:26.92:0,27,341	0/0:8,0:6:21.06:0,21,269	0/0:19,0:19:57.06:0,57,725	0/0:12,0:12:33.07:0,33,438	0/0:10,0:10:27.09:0,27,377	0/0:22,0:22:63.10:0,63,799	0/0:10,0:10:30.10:0,30,418	1/1:1,13:14:39.13:595,39,0	1/1:0,9:9:23.87:298,24,0	0/0:11,0:11:33.08:0,33,439	0/0:15,0:15:45.03:0,45,564	0/0:13,0:13:39.10:0,39,522	0/0:10,0:10:30.07:0,30,384	0/0:7,0:7:18.06:0,18,251	1/1:1,17:18:45.15:685,45,0	0/0:10,0:10:30.03:0,30,362	0/0:14,0:14:39.09:0,39,510	0/0:17,0:17:46.65:0,47,592	0/0:3,0:3:3.01:0,3,42	0/0:12,0:12:33.07:0,33,424	0/0:14,0:14:36.12:0,36,501	0/0:10,0:10:30.05:0,30,380	1/1:2,7:9:26.93:331,27,0	0/0:7,0:7:18.03:0,18,230	0/0:20,0:20:55.05:0,55,736	0/0:7,0:7:21.07:0,21,293
chr10	71838897	.	G	GA	902.45	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=8.519;DP=526;FS=18.197;HRun=0;HaplotypeScore=61.4663;InbreedingCoeff=0.9392;MQ=85.62;MQ0=2;MQRankSum=-7.708;QD=18.05;ReadPosRankSum=-0.907;VQSLOD=3.5262;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,3:3:3.01:40,3,0	0/0:21,0:21:63.19:0,63,849	0/0:18,0:18:54.14:0,54,715	0/0:21,0:21:63.21:0,63,875	0/0:16,0:16:48.16:0,48,671	0/0:18,0:18:54.15:0,54,719	0/0:29,0:29:87.25:0,87,1180	0/0:28,0:27:84.19:0,84,1146	1/1:2,10:9:18.53:258,19,0	1/1:0,8:6:9.02:118,9,0	0/0:20,0:20:60.19:0,60,823	0/0:21,0:21:63.21:0,63,874	0/0:16,0:16:48.16:0,48,671	0/0:34,0:34:99:0,102,1426	0/0:21,0:21:63.21:0,63,881	1/1:2,13:15:30.15:408,30,0	0/0:15,0:15:42.14:0,42,587	0/0:19,0:19:54.18:0,54,755	0/0:22,0:22:60.19:0,60,821	0/0:31,0:31:90.24:0,90,1218	0/0:28,0:28:78.16:0,78,1007	0/0:18,0:18:54.12:0,54,699	0/0:19,0:19:57.19:0,57,796	1/1:2,9:11:18.06:240,18,0	0/0:20,0:20:60.17:0,60,800	0/0:32,0:31:93.29:0,93,1280	0/0:9,0:9:27.09:0,27,375
chr10	71839411	.	A	AAGACCCAGGGGT	3379.42	PASS	AC=8;AF=0.167;AN=48;BaseQRankSum=0.081;DP=547;FS=39.747;HRun=0;HaplotypeScore=144.0532;InbreedingCoeff=0.9264;MQ=43.26;MQ0=69;MQRankSum=-6.197;QD=96.55;ReadPosRankSum=-0.952;VQSLOD=1.8234;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,1:3:6.02:248,6,0	./.	./.	0/0:26,0:25:51.18:0,51,2011	0/0:30,0:26:69.24:0,69,2729	0/0:25,0:23:48.11:0,48,1526	0/0:19,0:17:48.16:0,48,1728	0/0:22,0:20:54.18:0,54,2110	1/1:3,2:4:9.03:452,9,0	1/1:2,7:9:24.04:1348,24,0	0/0:22,0:18:39.13:0,39,1460	0/0:13,0:13:18.06:0,18,690	0/0:20,0:20:42.14:0,42,1610	0/0:27,0:26:57.20:0,57,2229	0/0:29,0:28:60.21:0,60,2231	./.	0/0:11,0:7:9.03:0,9,335	0/0:20,0:14:42.14:0,42,1477	0/0:26,0:26:69.24:0,69,2596	0/0:38,0:34:63.22:0,63,2292	0/0:25,0:23:39.13:0,39,1437	0/0:15,0:15:27.09:0,27,1069	0/0:22,0:19:15.05:0,15,594	1/1:5,8:16:21.07:1332,21,0	0/0:22,0:22:66.23:0,66,2427	0/0:25,0:25:54.66:0,55,2048	0/0:20,0:15:30.10:0,30,1188
chr10	71839481	.	A	AATAGTG	1640.62	PASS	AB=1.000;AC=11;AF=0.212;AN=52;BaseQRankSum=8.032;DP=421;FS=52.498;HRun=0;HaplotypeScore=91.2206;InbreedingCoeff=0.5729;MQ=51.02;MQ0=11;MQRankSum=-6.498;QD=21.87;ReadPosRankSum=-0.846;VQSLOD=1.1413;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,3:6:15.05:399,15,0	./.	0/0:32,0:9:14.29:0,14,382	0/0:17,0:17:45.15:0,45,1077	0/0:17,0:17:48.16:0,48,1152	0/0:13,0:13:24.07:0,24,524	0/0:28,0:28:81.23:0,81,1728	0/0:16,0:16:42.14:0,42,986	1/1:6,6:12:33:681,33,0	1/1:1,9:9:15.05:429,15,0	0/1:10,0:7:15.95:16,0,85	0/0:16,0:16:23.66:0,24,339	0/0:12,0:12:33.11:0,33,787	0/0:12,0:12:30.09:0,30,666	0/0:22,0:22:60.18:0,60,1320	0/0:1,0:1:3.01:0,3,49	0/0:10,0:7:18.06:0,18,291	0/0:15,0:15:42.12:0,42,873	0/0:23,0:23:69.21:0,69,1553	0/0:21,0:21:60.21:0,60,1414	0/1:14,0:14:27.95:28,0,137	0/0:17,0:17:4.04:0,4,280	0/1:15,0:12:23.94:24,0,165	1/1:1,7:7:9.03:226,9,0	0/0:17,0:17:48.14:0,48,992	0/0:18,0:18:54.17:0,54,1235	0/0:15,0:15:39:0,39,936
chr10	71839616	.	TGCCTCGC	T	87.51	PASS	AC=4;AF=0.083;AN=48;BaseQRankSum=2.986;DP=529;FS=5.911;HRun=0;HaplotypeScore=139.4768;InbreedingCoeff=0.8340;MQ=63.97;MQ0=1;MQRankSum=-2.828;QD=29.17;ReadPosRankSum=1.420;VQSLOD=3.2668;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:24,0:23:69.24:0,69,2745	0/0:33,0:33:92.53:0,93,3300	0/0:29,0:29:87.28:0,87,3429	0/0:27,0:27:81.28:0,81,3235	0/0:14,0:14:42.14:0,42,1744	0/0:30,0:30:87.30:0,87,3449	0/0:30,0:30:90.31:0,90,3726	1/1:0,2:2:6.02:122,6,0	./.	0/0:22,0:22:66.23:0,66,2116	0/0:21,0:21:63.22:0,63,2111	0/0:14,0:14:42.14:0,42,1751	0/0:16,0:16:45.15:0,45,1886	0/0:20,0:20:60.21:0,60,2366	1/1:0,1:1:3.01:61,3,0	0/0:20,0:20:54.19:0,54,1762	0/0:22,0:22:66.23:0,66,2678	0/0:25,0:25:75.26:0,75,3115	0/0:44,0:43:99:0,117,4874	0/0:34,0:34:99:0,102,3274	0/0:18,0:18:54.19:0,54,1672	0/0:23,0:23:69.24:0,69,2194	./.	0/0:22,0:22:66.23:0,66,2769	0/0:18,0:18:54.19:0,54,2251	0/0:11,0:11:33.11:0,33,1374
chr10	71839624	.	ATATGGGATT	A	128.23	PASS	AC=4;AF=0.083;AN=48;BaseQRankSum=2.912;DP=546;FS=11.388;HRun=0;HaplotypeScore=164.6753;InbreedingCoeff=0.8339;MQ=62.87;MQ0=0;MQRankSum=-2.018;QD=42.74;ReadPosRankSum=-0.019;VQSLOD=2.7456;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:31,0:31:79.61:0,80,3733	0/0:28,0:27:81.22:0,81,3447	0/0:30,0:30:90.27:0,90,3926	0/0:24,0:24:69.22:0,69,3237	0/0:18,0:18:54.16:0,54,2356	0/0:30,0:30:87.27:0,87,3816	0/0:32,0:32:96.30:0,96,4445	1/1:0,2:2:6.02:149,6,0	./.	0/0:23,0:23:69.22:0,69,3287	0/0:22,0:22:63.20:0,63,3038	0/0:17,0:17:51.18:0,51,2425	0/0:17,0:17:48.12:0,48,1953	0/0:20,0:20:60.18:0,60,2681	1/1:0,1:1:3.01:75,3,0	0/0:19,0:19:51.15:0,51,2436	0/0:24,0:24:72.25:0,72,3355	0/0:26,0:26:78.25:0,78,3673	0/0:44,0:44:99:0,129,5962	0/0:35,0:35:99:0,105,4760	0/0:20,0:20:60.21:0,60,2709	0/0:22,0:22:66.23:0,66,3250	./.	0/0:23,0:23:69.22:0,69,3294	0/0:19,0:19:57.20:0,57,2805	0/0:10,0:10:30.10:0,30,1518
chr10	71840122	.	C	CT	2158.20	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=-4.062;DP=532;FS=8.871;HRun=9;HaplotypeScore=67.9304;InbreedingCoeff=0.9002;MQ=50.15;MQ0=42;MQRankSum=2.162;QD=20.55;ReadPosRankSum=-0.468;VQSLOD=3.9158;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:1,0:11:22.41:0,22,66	0/0:10,0:6:13.51:0,14,99	0/0:10,0:6:2.26:0,2,91	0/0:22,0:20:50.21:0,50,434	0/0:24,0:23:32.63:0,33,353	0/0:13,0:11:26.99:0,27,234	0/0:13,0:13:35.97:0,36,308	0/0:26,0:24:56.96:0,57,494	0/0:3,0:10:20.37:0,20,60	0/0:1,0:5:10.19:0,10,30	1/1:6,19:23:5.02:497,5,0	1/1:3,19:21:34.79:605,35,0	0/0:26,0:24:59.94:0,60,513	0/0:28,0:23:59.97:0,60,521	0/0:19,0:18:53.91:0,54,455	0/0:1,0:24:46.63:0,47,137	0/0:21,0:17:44.94:0,45,384	0/0:18,0:16:38.99:0,39,339	0/0:26,0:24:68.99:0,69,599	0/0:34,0:33:86.02:0,86,735	1/1:3,17:19:42.11:464,42,0	1/1:3,13:16:36.06:385,36,0	1/1:4,18:22:13.05:372,13,0	0/0:2,0:12:22.59:0,23,67	0/0:33,0:33:94.05:0,94,793	0/0:16,0:15:41.98:0,42,360	0/0:9,0:8:17.99:0,18,156
chr10	71840657	.	CT	C	1282.17	PASS	AC=8;AF=0.160;AN=50;BaseQRankSum=5.236;DP=917;FS=0.000;HRun=2;HaplotypeScore=100.6989;InbreedingCoeff=0.9104;MQ=26.81;MQ0=301;MQRankSum=-2.298;QD=20.03;ReadPosRankSum=1.282;VQSLOD=3.6676;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:19:27.09:0,27,403	1/1:0,10:7:21.07:272,21,0	./.	./.	0/0:31,0:25:27.01:0,27,353	0/0:35,0:25:24.08:0,24,358	0/0:41,0:27:60.16:0,60,871	0/0:58,0:37:99:0,111,1661	0/0:57,0:35:54.05:0,54,730	1/1:1,17:15:36.12:466,36,0	1/1:1,19:17:27.09:349,27,0	0/0:43,0:39:44.55:0,45,621	0/0:48,0:42:51.49:0,51,733	0/0:47,0:37:51.04:0,51,708	0/0:48,0:38:36:0,36,485	0/0:36,0:25:38.79:0,39,507	./.	0/0:21,0:9:12.04:0,12,179	0/0:37,0:27:81.18:0,81,1140	0/0:30,0:22:63.21:0,63,930	0/0:29,0:8:3.01:0,3,45	0/0:41,0:39:48.12:0,48,692	0/0:25,0:24:23.82:0,24,358	0/0:36,0:13:9.03:0,9,134	1/1:1,15:12:27.09:350,27,0	0/0:45,0:33:99:0,99,1459	0/0:39,0:27:41.81:0,42,627	0/0:16,0:9:9.03:0,9,135
chr10	71843131	.	C	CGATA	2149.16	PASS	AB=0.891;AC=27;AF=0.587;AN=46;BaseQRankSum=-2.426;DP=633;FS=10.918;HRun=0;HaplotypeScore=102.9761;InbreedingCoeff=0.1140;MQ=31.07;MQ0=249;MQRankSum=-0.608;QD=5.17;ReadPosRankSum=-2.383;VQSLOD=0.7687;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:21:27.07:0,27,385	0/0:7,0:5:9.03:0,9,129	./.	./.	./.	1/1:17,0:7:3:27,3,0	0/1:16,0:9:34.85:35,0,160	./.	./.	0/0:31,0:27:45.01:0,45,514	0/0:12,0:10:12.04:0,12,180	1/1:17,11:22:11.97:260,12,0	0/1:24,21:36:72.59:259,0,73	0/1:26,0:15:35.31:35,0,39	1/1:20,0:12:2.88:50,3,0	1/1:26,0:8:5.98:70,6,0	0/0:16,0:14:30.01:0,30,370	0/1:14,0:10:30.50:30,0,46	1/1:12,0:6:9.03:149,9,0	1/1:14,0:3:2.97:20,3,0	0/1:9,3:10:18.94:63,0,19	1/1:12,16:20:15.05:334,15,0	0/1:38,5:30:99:131,0,282	0/1:27,12:28:99:303,0,274	1/1:8,5:12:6.02:139,6,0	1/1:16,0:14:21.07:346,21,0	0/1:20,0:12:0:0,0,0	0/1:7,0:2:12.70:53,0,13
chr10	71843264	.	T	TA	2757.90	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=-2.544;DP=814;FS=0.000;HRun=5;HaplotypeScore=98.4808;InbreedingCoeff=0.9925;MQ=38.90;MQ0=127;MQRankSum=-1.643;QD=21.05;ReadPosRankSum=-0.492;VQSLOD=2.3671;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:84.10:0,84,876	1/1:0,11:10:18:216,18,0	./.	./.	0/0:26,0:21:42.02:0,42,426	0/0:11,0:10:24.06:0,24,258	0/0:21,0:14:21.05:0,21,225	0/0:30,0:6:15.01:0,15,150	0/0:21,0:18:51.01:0,51,521	1/1:6,32:34:58.04:1098,58,0	1/1:6,24:24:38.98:453,39,0	0/0:39,0:35:78.05:0,78,790	0/0:57,0:50:99:0,102,1061	0/0:34,0:29:51.04:0,51,522	0/0:29,0:29:57.10:0,57,600	0/0:21,0:16:39.10:0,39,419	1/1:1,19:19:42.14:553,42,0	0/0:37,0:31:60.12:0,60,629	0/0:22,0:16:45.11:0,45,483	0/0:26,0:17:30.08:0,30,322	0/0:26,0:26:57.14:0,57,612	0/0:46,0:40:96.16:0,96,1007	0/0:51,0:40:93.17:0,93,976	0/0:41,0:35:81.15:0,81,848	1/1:3,29:30:48.10:609,48,0	0/0:32,1:28:41.72:0,42,799	0/0:32,0:30:60.14:0,60,644	0/0:19,0:17:30.04:0,30,311
chr10	71844953	.	TG	T	431.20	PASS	AB=0.875;AC=3;AF=0.058;AN=52;BaseQRankSum=1.094;DP=298;FS=1.099;HRun=9;HaplotypeScore=22.5524;InbreedingCoeff=0.2612;MQ=29.97;MQ0=79;MQRankSum=1.399;QD=13.91;ReadPosRankSum=2.758;VQSLOD=2.1113;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:51.05:0,51,557	0/0:3,0:1:3.01:0,3,35	./.	0/0:15,0:1:2.96:0,3,19	0/0:8,0:4:6.02:0,6,69	0/1:6,1:6:9.37:9,0,155	0/0:7,0:6:6.02:0,6,69	0/0:9,1:2:6.02:0,6,69	0/0:6,0:3:5.95:0,6,52	0/0:6,0:2:6.01:0,6,60	0/0:13,0:9:11.97:0,12,122	0/0:9,0:8:6.02:0,6,69	0/0:5,0:3:5.96:0,6,53	0/0:1,0:1:3.01:0,3,34	0/0:11,0:7:12.04:0,12,138	0/0:14,0:11:24.02:0,24,261	0/0:20,0:16:33.06:0,33,365	1/1:0,24:23:57.03:521,57,0	0/0:3,0:2:6.02:0,6,69	0/0:12,0:6:11.87:0,12,118	0/0:8,0:6:18.05:0,18,208	0/0:17,0:9:17.99:0,18,191	0/0:11,0:9:14.95:0,15,142	0/0:15,0:17:32.69:0,33,309	./.	0/0:10,0:8:23.87:0,24,234	0/0:5,0:5:12.04:0,12,138	0/0:6,0:5:15.04:0,15,166
chr10	71845128	.	A	ATCTTTAC	3401.48	PASS	AB=0.740;AC=4;AF=0.105;AN=38;BaseQRankSum=-5.000;DP=606;FS=26.385;HRun=0;HaplotypeScore=54.9024;InbreedingCoeff=-0.2013;MQ=19.86;MQ0=360;MQRankSum=-2.407;QD=39.10;ReadPosRankSum=-0.876;VQSLOD=1.0569;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:2:3.01:0,3,79	0/1:7,3:9:99:394,0,268	./.	./.	0/0:32,0:29:38.86:0,39,784	0/0:23,0:6:2.92:0,3,17	./.	./.	./.	0/1:21,3:15:99:576,0,544	0/1:14,11:30:99:1306,0,189	./.	0/0:21,0:3:3.01:0,3,79	./.	0/0:24,0:6:6.02:0,6,158	0/0:18,0:5:3.48:0,3,39	0/0:11,0:5:12.04:0,12,316	0/0:11,0:2:3.01:0,3,79	0/0:21,0:2:5.98:0,6,99	0/0:29,0:29:77.91:0,78,1648	./.	0/0:27,0:22:44.77:0,45,1125	0/0:23,0:23:26.84:0,27,651	./.	0/1:12,9:19:99:1125,0,460	0/0:26,0:13:39.13:0,39,963	0/0:26,0:6:14.73:0,15,268	0/0:9,0:2:3.01:0,3,79
chr10	71845231	.	C	CA	328.05	PASS	AB=0.720;AC=4;AF=0.087;AN=46;BaseQRankSum=5.581;DP=769;FS=0.000;HRun=2;HaplotypeScore=59.8700;InbreedingCoeff=-0.1409;MQ=22.68;MQ0=370;MQRankSum=-0.094;QD=2.67;ReadPosRankSum=1.186;VQSLOD=-0.5529;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:3:9.03:0,9,111	0/1:10,7:13:99:142,0,193	./.	./.	0/0:44,0:38:42.13:0,42,519	0/0:28,0:12:12.04:0,12,148	0/0:21,0:2:3.01:0,3,37	0/0:32,0:1:3.01:0,3,37	0/0:32,0:16:20.54:0,21,259	0/1:29,14:33:99:172,0,767	0/1:26,13:32:53.03:53,0,300	0/0:30,0:16:17.55:0,18,222	0/0:32,0:11:21.07:0,21,259	0/0:35,0:16:27.08:0,27,334	0/0:36,0:21:18.06:0,18,222	0/0:25,0:11:18.06:0,18,223	0/0:16,3:1:3.01:0,3,37	0/0:22,0:5:3.01:0,3,37	./.	0/0:34,0:29:75.24:0,75,927	./.	0/0:45,0:34:42.08:0,42,519	0/0:19,0:16:24.08:0,24,297	./.	0/1:12,12:18:65.07:65,0,164	0/0:26,0:16:45.14:0,45,557	0/0:41,0:25:32.89:0,33,408	0/0:13,0:7:9.03:0,9,111
chr10	71847519	.	TAGAG	T	729.37	PASS	AB=0.787;AC=4;AF=0.083;AN=48;BaseQRankSum=5.336;DP=670;FS=4.020;HRun=0;HaplotypeScore=92.5460;InbreedingCoeff=-0.1072;MQ=27.72;MQ0=152;MQRankSum=-1.452;QD=8.68;ReadPosRankSum=-0.232;VQSLOD=2.4663;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:5:12.04:0,12,311	0/1:7,7:13:99:295,0,107	./.	./.	0/0:23,0:16:14.89:0,15,388	0/0:25,0:16:18.06:0,18,444	0/0:25,0:15:33.11:0,33,785	0/0:30,0:13:36.12:0,36,790	0/0:19,0:14:21.07:0,21,544	0/1:18,3:19:99:120,0,314	0/1:20,6:22:99:179,0,271	0/0:29,0:20:24.08:0,24,619	0/0:30,0:23:33.11:0,33,854	0/0:21,0:17:23.74:0,24,621	0/0:27,0:23:12.04:0,12,290	0/0:23,0:20:26.94:0,27,699	./.	./.	0/0:28,0:17:48.09:0,48,1095	0/0:39,0:29:66.23:0,66,1640	0/0:19,0:8:12.04:0,12,306	0/0:23,0:19:32.82:0,33,795	0/0:26,0:18:27.09:0,27,666	0/0:18,0:13:6.02:0,6,156	0/1:17,6:20:99:241,0,322	0/0:47,0:35:93.29:0,93,2261	0/0:47,0:38:51.03:0,51,1296	0/0:11,0:7:5.99:0,6,155
chr10	71847782	.	A	AG	1686.77	PASS	AB=0.707;AC=5;AF=0.089;AN=56;BaseQRankSum=5.328;DP=1337;FS=11.246;HRun=3;HaplotypeScore=163.2366;InbreedingCoeff=-0.0980;MQ=77.79;MQ0=0;MQRankSum=-6.170;QD=9.37;ReadPosRankSum=1.048;VQSLOD=0.3729;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.25:0,87,1030	0/1:12,10:20:99:201,0,219	0/0:45,0:43:99:0,117,1341	0/0:55,0:55:99:0,147,1703	0/0:58,0:57:99:0,168,1975	0/0:52,0:52:99:0,147,1715	0/0:39,0:39:99:0,117,1381	0/0:67,0:67:99:0,181,2125	0/0:56,0:56:99:0,159,1880	0/1:29,21:49:99:666,0,810	0/1:25,16:40:99:418,0,639	0/0:38,0:38:99:0,105,1222	0/0:48,0:48:99:0,135,1574	0/0:31,0:31:84.08:0,84,942	0/0:46,0:46:99:0,129,1547	0/0:53,0:53:99:0,143,1596	0/1:22,10:32:99:179,0,575	0/0:44,0:44:99:0,126,1451	0/0:60,0:60:99:0,168,1993	0/0:62,0:53:99:0,156,1846	0/0:69,0:69:99:0,199,2329	0/0:45,0:45:99:0,129,1490	0/0:47,0:47:99:0,135,1538	0/0:48,0:48:99:0,135,1603	0/1:17,18:29:99:341,0,498	0/0:69,0:69:99:0,199,2336	0/0:68,0:68:99:0,193,2260	0/0:26,0:26:78.24:0,78,936
chr10	71849090	.	A	AG	430.50	PASS	AB=0.809;AC=5;AF=0.100;AN=50;BaseQRankSum=5.158;DP=773;FS=6.518;HRun=1;HaplotypeScore=52.3109;InbreedingCoeff=-0.1391;MQ=21.41;MQ0=344;MQRankSum=-1.512;QD=3.47;ReadPosRankSum=0.068;VQSLOD=-0.1770;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/1:6,7:7:79.36:111,0,79	./.	./.	0/0:25,0:17:12:0,12,136	0/0:31,0:21:23.87:0,24,232	0/0:28,0:14:23.96:0,24,254	0/0:34,0:16:48.08:0,48,562	0/0:25,0:11:21.03:0,21,252	0/1:32,15:31:99:274,0,681	0/1:14,2:7:35.50:35,0,68	0/0:31,0:15:17.95:0,18,169	0/0:25,0:14:23.98:0,24,278	0/0:23,0:18:30.06:0,30,361	0/0:37,0:20:21.07:0,21,259	0/0:23,0:13:14.99:0,15,174	0/1:29,1:16:7.97:8,0,57	0/0:18,0:7:3.01:0,3,39	0/0:17,0:7:18.06:0,18,233	0/0:26,0:8:17.51:0,18,162	0/0:49,0:9:2.97:0,3,20	0/0:31,0:18:17.91:0,18,174	0/0:22,0:12:6.01:0,6,77	0/0:39,0:10:2.49:0,2,18	0/1:13,5:10:22.85:113,0,23	0/0:20,2:10:11.07:0,11,266	0/0:28,0:20:21.51:0,22,254	0/0:22,0:10:21.03:0,21,253
chr10	71849465	.	T	TTC	528.88	PASS	AB=0.953;AC=19;AF=0.396;AN=48;BaseQRankSum=6.483;DP=497;FS=16.033;HRun=0;HaplotypeScore=96.9649;InbreedingCoeff=0.1848;MQ=41.79;MQ0=47;MQRankSum=-0.562;QD=2.07;ReadPosRankSum=-0.716;VQSLOD=0.7219;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/0:33,0:28:22.85:0,23,200	0/0:31,0:26:29.72:0,30,291	0/0:23,0:23:42.04:0,42,451	0/0:21,0:12:27.78:0,28,215	0/0:22,0:20:2.80:0,3,258	1/1:26,0:19:39.53:224,40,0	1/1:10,0:6:2.70:6,3,0	0/0:17,0:9:15.94:0,16,125	0/0:21,0:16:8.70:0,9,58	0/0:20,0:17:27.93:0,28,224	0/0:21,0:19:33.39:0,33,312	0/1:17,0:14:35.85:36,0,135	1/1:20,0:14:14.55:97,15,0	1/1:10,0:6:1.25:3,1,0	0/1:16,0:10:10.81:11,0,83	0/1:23,0:17:16.10:16,0,91	0/1:28,0:26:72.38:85,0,72	1/1:23,0:13:0.20:15,0,0	0/0:11,0:7:10.95:0,11,66	0/1:20,0:18:45.87:46,0,107	0/0:13,0:8:1.78:0,2,7	0/1:20,0:18:67.82:74,0,68	0/1:17,10:30:16.49:16,0,117	1/1:9,0:3:6:52,6,0
chr10	71849469	.	CTG	C	1059.13	PASS	AB=0.915;AC=21;AF=0.438;AN=48;BaseQRankSum=3.730;DP=483;FS=8.609;HRun=0;HaplotypeScore=94.1419;InbreedingCoeff=0.3427;MQ=41.87;MQ0=49;MQRankSum=2.212;QD=3.78;ReadPosRankSum=-2.255;VQSLOD=1.2638;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/1:31,4:29:17.26:17,0,158	0/0:30,0:25:16.09:0,16,323	0/0:20,1:22:26.35:0,26,381	0/0:20,0:13:11.95:0,12,111	0/1:20,0:18:39.75:40,0,214	0/1:17,7:18:2.11:283,0,2	1/1:3,5:4:6.01:64,6,0	1/1:14,2:8:18.52:198,19,0	1/1:11,8:15:5.20:66,5,0	0/1:19,0:16:21.62:22,0,186	0/0:20,0:18:16.88:0,17,238	0/0:17,0:14:20.78:0,21,232	1/1:13,5:12:3.45:34,3,0	0/0:7,0:5:0.47:0,0,1	0/1:15,0:9:26.96:27,0,39	0/0:22,0:15:11.65:0,12,154	0/0:18,0:24:9.02:0,9,117	1/1:14,10:14:5.97:51,6,0	1/1:11,1:9:17.84:161,18,0	1/1:21,1:20:23.87:241,24,0	0/1:9,4:8:3.11:13,0,3	0/0:13,0:20:29.90:0,30,250	0/1:32,0:30:5.51:6,0,82	0/0:9,0:2:6.01:0,6,71
chr10	71849945	.	CACAGAA	C	802.11	PASS	AC=12;AF=0.261;AN=46;BaseQRankSum=5.809;DP=563;FS=5.211;HRun=0;HaplotypeScore=48.5701;InbreedingCoeff=0.7488;MQ=24.09;MQ0=298;MQRankSum=-4.771;QD=10.99;ReadPosRankSum=-1.130;VQSLOD=1.0538;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/0:25,0:14:21.06:0,21,632	0/0:26,0:16:21.07:0,21,701	0/0:28,0:16:33.07:0,33,992	0/0:31,0:4:12.04:0,12,428	0/0:25,0:14:24.08:0,24,776	0/0:18,0:1:3.01:0,3,108	0/0:11,0:1:3.01:0,3,78	1/1:6,6:2:3.01:71,3,0	1/1:5,10:5:6.02:144,6,0	0/0:24,0:13:20.96:0,21,471	0/0:23,0:10:9.03:0,9,305	0/0:29,0:15:33.11:0,33,1096	./.	1/1:2,1:2:3.01:72,3,0	0/0:23,0:7:21.07:0,21,757	0/0:30,0:22:48.16:0,48,1647	0/0:28,0:13:36.09:0,36,1078	1/1:10,9:8:17.87:271,18,0	1/1:2,9:7:14.63:253,15,0	1/1:8,5:6:6.02:142,6,0	0/0:13,0:5:6.02:0,6,215	0/0:25,0:15:45.10:0,45,1228	0/0:30,0:24:21:0,21,619	0/0:10,0:5:15.05:0,15,461
chr10	71851539	.	AGCAG	A	91.33	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=1.903;DP=549;FS=2.315;HRun=0;HaplotypeScore=86.4774;InbreedingCoeff=0.9246;MQ=66.62;MQ0=25;MQRankSum=-2.509;QD=18.27;ReadPosRankSum=0.648;VQSLOD=3.3342;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:8,0:8:21.07:0,21,575	0/0:30,0:16:36.10:0,36,806	0/0:29,0:18:39:0,39,891	0/0:24,0:24:72.22:0,72,1777	0/0:21,0:21:63.22:0,63,1683	0/0:15,0:15:39.13:0,39,1042	0/0:36,0:33:96.30:0,96,2435	0/0:29,0:29:87.30:0,87,2360	0/0:22,0:19:57.20:0,57,1527	0/0:12,0:9:18.06:0,18,482	0/0:14,0:14:39.12:0,39,1009	0/0:17,0:17:46.71:0,47,1159	0/0:15,0:15:45.15:0,45,1223	0/0:19,0:19:54.19:0,54,1447	0/0:26,0:26:78.27:0,78,2058	0/0:19,0:17:48.16:0,48,1273	1/1:0,5:5:9.03:174,9,0	0/0:22,0:19:54.11:0,54,1339	0/0:19,0:19:57.20:0,57,1561	0/0:32,0:32:93.30:0,93,2455	0/0:24,0:24:72.25:0,72,1891	0/0:21,0:20:57.20:0,57,1507	0/0:13,0:13:33.11:0,33,903	0/0:13,0:12:27.09:0,27,724	0/0:22,0:22:63.22:0,63,1715	0/0:32,0:32:96.32:0,96,2535	0/0:10,0:9:27.09:0,27,732
chr10	71853263	.	A	AC	3065.47	PASS	AB=0.556;AC=17;AF=0.327;AN=52;BaseQRankSum=8.219;DP=580;FS=18.812;HRun=2;HaplotypeScore=62.3858;InbreedingCoeff=0.9125;MQ=50.31;MQ0=18;MQRankSum=-12.586;QD=27.87;ReadPosRankSum=-3.638;VQSLOD=1.3640;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,8:4:9.03:129,9,0	0/0:21,0:9:24.02:0,24,257	0/0:28,0:16:27.65:0,28,488	0/0:20,0:20:51.02:0,51,580	0/0:31,0:30:72.23:0,72,888	0/0:26,0:25:57.07:0,57,656	0/0:31,0:14:39.11:0,39,470	0/0:29,0:29:72.16:0,72,872	1/1:2,22:22:60.20:859,60,0	1/1:1,15:15:41.96:534,42,0	1/1:2,9:10:24.08:328,24,0	0/1:1,4:5:4.82:157,0,5	0/0:28,0:28:68.74:0,69,842	0/0:30,0:30:59.98:0,60,685	0/0:18,0:18:54.16:0,54,655	./.	0/0:19,0:18:45.02:0,45,507	0/0:23,0:13:36.11:0,36,446	0/0:25,0:24:72.10:0,72,831	0/0:56,0:55:99:0,147,1809	1/1:1,14:14:33.11:468,33,0	1/1:1,14:14:30.02:401,30,0	1/1:2,3:3:9.03:129,9,0	1/1:2,9:11:17.98:258,18,0	0/0:37,0:36:99:0,99,1227	0/0:32,0:32:93.23:0,93,1123	0/0:15,0:15:45.14:0,45,558
chr10	71853367	.	C	CA	2099.95	PASS	AC=22;AF=0.407;AN=54;BaseQRankSum=7.654;DP=462;FS=1.146;HRun=3;HaplotypeScore=53.4361;InbreedingCoeff=0.9056;MQ=55.99;MQ0=5;MQRankSum=-11.481;QD=24.42;ReadPosRankSum=-0.402;VQSLOD=2.6614;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,3:3:9.03:126,9,0	0/0:18,0:14:29.96:0,30,326	0/0:12,0:8:14.96:0,15,161	0/0:24,0:23:51.16:0,51,612	0/0:15,0:14:36.11:0,36,432	0/0:16,0:16:5.35:0,5,365	0/0:37,0:35:99:0,105,1233	0/0:27,0:27:81.25:0,81,972	1/1:2,5:5:9.03:126,9,0	1/1:5,11:16:27.09:376,27,0	1/1:2,5:5:12.04:168,12,0	1/1:1,6:7:18.06:244,18,0	0/0:26,0:26:54.16:0,54,647	0/0:25,0:25:69.21:0,69,827	0/0:21,0:21:54.16:0,54,646	1/1:1,2:3:6.02:84,6,0	1/1:1,4:5:9.03:126,9,0	0/0:22,0:18:54.15:0,54,636	0/0:35,0:34:84.26:0,84,1008	0/0:28,0:28:69.19:0,69,815	1/1:0,12:12:33.11:461,33,0	1/1:2,9:10:21.03:271,21,0	1/1:3,4:6:3.01:33,3,0	1/1:1,7:8:21.07:293,21,0	0/0:32,0:31:87.22:0,87,1027	0/0:28,0:26:69.19:0,69,812	0/0:10,0:10:30.09:0,30,360
chr10	71856230	.	C	CA	1265.42	PASS	AC=10;AF=0.200;AN=50;BaseQRankSum=-4.246;DP=541;FS=0.000;HRun=4;HaplotypeScore=39.1307;InbreedingCoeff=0.9447;MQ=38.49;MQ0=152;MQRankSum=-0.086;QD=21.09;ReadPosRankSum=-2.388;VQSLOD=2.0775;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,2:2:6.02:82,6,0	./.	./.	0/0:31,0:23:45.13:0,45,510	0/0:31,0:17:36.04:0,36,391	0/0:14,0:7:14.99:0,15,154	0/0:32,0:7:18:0,18,173	0/0:15,0:10:24.07:0,24,272	1/1:5,13:11:24.08:328,24,0	1/1:2,11:11:33.11:442,33,0	0/0:19,0:10:27.04:0,27,292	0/0:23,0:13:24.07:0,24,272	0/0:20,0:10:14.96:0,15,141	0/0:19,0:8:18.05:0,18,204	0/0:24,0:13:39.11:0,39,440	1/1:3,8:6:9.03:123,9,0	0/0:21,0:15:39.08:0,39,429	0/0:21,0:10:30.09:0,30,340	0/0:31,0:21:57.15:0,57,636	0/0:19,0:14:36.10:0,36,408	0/0:21,0:15:39.11:0,39,442	0/0:21,0:18:38.72:0,39,402	0/0:31,0:20:48.14:0,48,544	1/1:1,14:13:33.11:451,33,0	0/0:28,0:19:51.15:0,51,579	0/0:32,0:21:36.10:0,36,408	0/0:10,0:7:18.05:0,18,204
chr10	71856729	.	C	CT	661.37	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=0.135;DP=499;FS=0.000;HRun=1;HaplotypeScore=42.8671;InbreedingCoeff=0.9387;MQ=50.73;MQ0=20;MQRankSum=-4.241;QD=10.50;ReadPosRankSum=-1.163;VQSLOD=0.8728;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,5:3:9.03:135,9,0	0/0:20,0:10:29.62:0,30,322	0/0:19,0:12:27.97:0,28,349	0/0:37,0:36:75.24:0,75,964	0/0:16,0:16:24.08:0,24,311	0/0:12,0:11:33.11:0,33,419	0/0:31,0:29:87.27:0,87,1116	0/0:19,0:19:39.13:0,39,506	1/1:1,15:5:15.05:217,15,0	1/1:1,14:3:8.99:110,9,0	0/0:11,0:10:24.08:0,24,311	0/0:16,0:16:39.12:0,39,498	0/0:14,0:14:30.10:0,30,389	0/0:24,0:24:57.16:0,57,711	0/0:15,0:15:24.08:0,24,307	1/1:1,16:10:9.03:135,9,0	0/0:10,0:10:18.06:0,18,233	0/0:19,0:19:54.18:0,54,701	0/0:38,0:36:99:0,108,1398	0/0:5,0:5:15.05:0,15,195	0/0:28,0:27:66.21:0,66,853	0/0:20,0:20:54.18:0,54,698	0/0:13,0:13:14.97:0,15,195	1/1:0,10:5:15.05:225,15,0	0/0:26,0:24:69.20:0,69,879	0/0:25,0:24:60.19:0,60,774	0/0:16,0:16:42.14:0,42,541
chr10	71859022	.	G	GA	3641.43	PASS	AB=0.776;AC=22;AF=0.407;AN=54;BaseQRankSum=2.947;DP=432;FS=8.308;HRun=8;HaplotypeScore=56.1655;InbreedingCoeff=0.8598;MQ=66.60;MQ0=0;MQRankSum=1.369;QD=20.01;ReadPosRankSum=1.991;VQSLOD=3.4582;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,1:13:31.45:179,31,0	0/0:11,0:9:17.84:0,18,149	0/1:10,0:8:6.17:6,0,86	0/0:19,0:19:51.01:0,51,467	0/0:12,0:12:30.01:0,30,275	0/0:14,0:14:39.02:0,39,357	0/0:24,0:24:54.01:0,54,494	0/0:15,0:15:39.02:0,39,357	1/1:2,1:26:68.43:372,68,0	1/1:2,0:13:28.53:150,29,0	0/1:3,13:16:21.88:264,0,22	1/1:0,16:16:45.13:519,45,0	0/0:14,0:14:42.02:0,42,384	0/0:17,0:17:42.02:0,42,384	0/0:16,0:16:42.02:0,42,384	1/1:0,2:19:42.95:257,43,0	1/1:1,15:15:39.12:449,39,0	0/0:20,0:20:54.03:0,54,494	0/0:18,0:18:54.01:0,54,488	0/0:21,0:21:57.02:0,57,522	1/1:0,13:13:39.07:435,39,0	1/1:2,16:18:42.12:485,42,0	1/1:1,11:12:33.10:381,33,0	1/1:0,0:10:28.41:144,28,0	0/0:21,0:21:39.42:0,39,452	0/0:19,0:19:57.03:0,57,522	0/0:9,0:9:27.01:0,27,247
chr10	71860016	.	G	GATATAT	3494.07	PASS	AC=18;AF=0.360;AN=50;BaseQRankSum=0.168;DP=338;FS=3.056;HRun=0;HaplotypeScore=79.7926;InbreedingCoeff=0.8879;MQ=73.05;MQ0=2;MQRankSum=-7.870;QD=45.97;ReadPosRankSum=-0.836;VQSLOD=3.2640;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,5:8:18.06:546,18,0	0/0:11,0:9:9.01:0,9,113	0/0:11,0:11:6.35:0,6,113	0/0:18,0:18:42.14:0,42,903	0/0:29,0:29:69.24:0,69,1494	0/0:10,0:10:27.09:0,27,535	0/0:31,0:31:78.26:0,78,1599	0/0:10,0:10:27.09:0,27,591	1/1:8,4:12:21.07:640,21,0	1/1:1,7:10:18.06:545,18,0	1/1:2,0:4:6.02:159,6,0	1/1:1,0:4:6.02:158,6,0	0/0:11,0:11:27.09:0,27,592	0/0:9,0:9:21.07:0,21,443	0/0:11,0:11:30.10:0,30,639	1/1:7,7:16:24.08:686,24,0	1/1:10,0:8:12.04:276,12,0	0/0:8,0:8:21.07:0,21,461	0/0:22,0:22:57.18:0,57,1190	0/0:6,0:6:12.04:0,12,245	./.	1/1:1,0:2:3.01:78,3,0	./.	1/1:6,3:8:12.04:405,12,0	0/0:27,0:27:78.27:0,78,1639	0/0:33,0:33:78.27:0,78,1636	0/0:15,0:15:42.14:0,42,921
chr10	71861530	.	TTC	T	3200.30	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=13.081;DP=559;FS=0.463;HRun=0;HaplotypeScore=87.5767;InbreedingCoeff=0.9599;MQ=65.66;MQ0=1;MQRankSum=-5.676;QD=37.21;ReadPosRankSum=4.502;VQSLOD=6.0102;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,11:10:30.10:487,30,0	0/0:24,0:18:33.09:0,33,790	0/0:29,0:23:65.47:0,65,1140	0/0:17,0:17:48.16:0,48,954	0/0:17,0:17:51.17:0,51,1018	0/0:17,0:17:51.16:0,51,1001	0/0:29,0:29:87.28:0,87,1646	0/0:35,0:35:99:0,105,2096	1/1:0,16:16:48.16:780,48,0	1/1:0,20:17:38.72:594,39,0	0/0:24,0:24:72.22:0,72,1373	0/0:25,0:25:75.26:0,75,1518	0/0:25,0:25:75.24:0,75,1463	0/0:15,0:15:45.15:0,45,913	0/0:26,0:26:78.27:0,78,1584	1/1:0,20:20:51.17:830,51,0	0/0:19,0:19:54.15:0,54,1033	0/0:17,0:17:51.16:0,51,996	0/0:25,0:25:75.18:0,75,1420	0/0:22,0:22:63.22:0,63,1260	0/0:14,0:14:39.13:0,39,792	0/0:17,0:17:51.16:0,51,980	0/0:27,0:27:81.28:0,81,1643	1/1:0,19:17:42.14:682,42,0	0/0:22,0:22:66.22:0,66,1307	0/0:26,0:25:78.24:0,78,1508	0/0:1,0:1:3.01:0,3,59
chr10	71864507	.	AAC	A	1022.81	PASS	AB=0.906;AC=19;AF=0.396;AN=48;BaseQRankSum=5.204;DP=530;FS=1.334;HRun=0;HaplotypeScore=82.6954;InbreedingCoeff=0.0261;MQ=56.92;MQ0=20;MQRankSum=-1.514;QD=3.41;ReadPosRankSum=1.052;VQSLOD=1.9616;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:3,0:2:14.65:15,0,39	./.	./.	0/1:15,4:17:77.45:77,0,158	0/0:18,0:20:9.92:0,10,275	0/1:12,1:14:41.96:42,0,53	0/1:21,0:21:20.74:21,0,104	0/0:21,0:21:44.92:0,45,583	1/1:16,4:15:12.03:131,12,0	1/1:18,6:21:23.73:225,24,0	./.	0/0:10,0:13:11.99:0,12,115	0/1:12,3:15:40.97:41,0,184	0/1:26,1:27:32.77:33,0,488	0/0:14,0:14:21.05:0,21,283	1/1:21,14:34:30.47:312,30,0	0/1:16,0:21:8.86:19,0,9	0/1:11,1:11:26.80:27,0,39	0/1:24,2:27:34.58:35,0,491	0/1:20,2:20:2.76:3,0,313	0/0:17,0:15:5.99:0,6,50	0/0:12,0:9:6:0,6,65	0/0:31,0:26:15:0,15,164	1/1:11,10:17:20.72:192,21,0	0/1:13,1:13:14.80:15,0,188	0/0:21,0:21:18.06:0,18,259	0/0:14,0:14:9.03:0,9,129
chr10	71864802	.	ATATCTTGG	A	4210.05	PASS	AB=0.977;AC=12;AF=0.222;AN=54;BaseQRankSum=11.675;DP=561;FS=8.931;HRun=0;HaplotypeScore=143.2819;InbreedingCoeff=0.7730;MQ=58.22;MQ0=1;MQRankSum=-11.485;QD=37.93;ReadPosRankSum=0.179;VQSLOD=3.8498;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,6:5:12.04:324,12,0	0/0:5,0:4:12.04:0,12,384	0/1:5,0:4:18.22:18,0,306	0/0:17,0:17:42.14:0,42,1801	0/0:20,0:20:60.21:0,60,2482	0/0:28,0:28:75.26:0,75,2998	0/0:20,0:20:45.14:0,45,1719	0/0:20,0:20:54.19:0,54,2182	1/1:5,16:18:39.13:1051,39,0	1/1:2,16:15:30.10:806,30,0	0/0:20,0:20:54.19:0,54,2259	0/0:29,0:29:81.28:0,81,3315	0/0:29,0:29:75.26:0,75,3145	0/0:32,0:32:93.32:0,93,3849	0/0:29,0:29:81.26:0,81,3239	1/1:4,16:19:35.34:942,35,0	0/1:20,1:21:17.71:18,0,2257	0/0:19,0:17:39.13:0,39,1527	0/0:17,0:17:45.15:0,45,1792	0/0:30,0:29:69.24:0,69,2705	0/0:23,0:23:63.21:0,63,2522	0/0:20,0:19:48.16:0,48,1973	0/0:31,0:31:81.28:0,81,3397	1/1:4,16:18:39.13:1051,39,0	0/0:23,0:23:57.19:0,57,2270	0/0:30,0:30:90.31:0,90,3739	0/0:8,0:8:15.05:0,15,560
chr10	71874059	.	C	CGATA	298.26	PASS	AC=6;AF=0.250;AN=24;BaseQRankSum=-2.775;DP=436;FS=3.911;HRun=0;HaplotypeScore=61.6940;InbreedingCoeff=0.8166;MQ=26.75;MQ0=252;MQRankSum=-2.159;QD=5.63;ReadPosRankSum=-2.554;VQSLOD=1.2605;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:21,2:7:6.02:139,6,0	./.	./.	./.	1/1:9,0:3:3.01:53,3,0	./.	./.	./.	./.	1/1:12,7:13:9.03:209,9,0	0/0:28,0:19:36.12:0,36,542	0/0:23,0:16:21.07:0,21,320	./.	0/0:11,0:6:12:0,12,111	0/0:17,0:8:15.05:0,15,225	0/0:30,0:14:39.09:0,39,554	0/0:33,0:23:66.21:0,66,982	./.	./.	./.	./.	0/0:18,0:13:27.09:0,27,403	0/0:28,0:18:27.04:0,27,375	0/0:6,0:7:15.04:0,15,211
chr10	71874074	.	TAG	T	188.05	PASS	AC=2;AF=0.063;AN=32;BaseQRankSum=2.855;DP=399;FS=0.000;HRun=0;HaplotypeScore=63.1727;InbreedingCoeff=0.5556;MQ=30.86;MQ0=195;MQRankSum=-1.600;QD=20.89;ReadPosRankSum=2.283;VQSLOD=3.6542;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/0:26,0:11:6.02:0,6,80	0/0:17,0:10:6.02:0,6,101	0/0:15,0:7:8.98:0,9,105	0/0:36,0:5:12.02:0,12,152	0/0:7,0:3:3.01:0,3,43	./.	./.	./.	./.	0/0:18,0:14:13.92:0,14,169	0/0:24,0:19:42.14:0,42,794	0/0:22,0:17:39.13:0,39,702	./.	1/1:1,8:6:18.06:274,18,0	0/0:12,0:7:21.07:0,21,374	0/0:32,0:20:60.20:0,60,1045	0/0:32,0:27:78.27:0,78,1437	./.	./.	0/0:8,0:1:3.01:0,3,58	./.	0/0:23,0:18:54.18:0,54,906	0/0:26,0:18:42.14:0,42,728	0/0:9,0:9:22.09:0,22,390
chr10	71875315	.	GT	G	729.12	PASS	AC=10;AF=0.238;AN=42;BaseQRankSum=2.784;DP=363;FS=0.769;HRun=4;HaplotypeScore=39.6164;InbreedingCoeff=0.9098;MQ=48.01;MQ0=62;MQRankSum=2.654;QD=13.76;ReadPosRankSum=3.127;VQSLOD=1.7070;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:20,0:8:15.28:0,15,145	0/0:21,0:12:16.18:0,16,166	0/0:23,0:18:10.05:0,10,149	0/0:16,0:14:22.17:0,22,226	0/0:19,0:16:23.99:0,24,288	0/0:19,0:17:34.77:0,35,319	0/0:16,0:14:22.57:0,23,265	./.	./.	1/1:2,9:9:21.02:229,21,0	1/1:8,4:8:4.18:128,4,0	0/0:16,0:12:17.98:0,18,203	0/0:16,0:14:23.02:0,23,233	0/0:17,0:16:15.77:0,16,140	./.	./.	0/0:23,0:17:45.50:0,45,501	0/0:16,0:13:18.01:0,18,210	0/0:9,0:8:14.97:0,15,166	1/1:7,6:8:18.05:206,18,0	1/1:2,4:4:12.04:141,12,0	1/1:1,10:10:15.04:176,15,0	./.	0/0:13,0:12:30.42:0,30,308	0/0:19,0:16:36.75:0,37,509	0/0:13,0:12:13.64:0,14,188
chr10	71877274	.	CT	C	2252.08	PASS	AC=10;AF=0.238;AN=42;BaseQRankSum=6.203;DP=493;FS=1.564;HRun=6;HaplotypeScore=70.8405;InbreedingCoeff=0.9943;MQ=47.88;MQ0=4;MQRankSum=-0.439;QD=23.71;ReadPosRankSum=0.727;VQSLOD=3.2280;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:96.28:0,96,1228	./.	0/0:21,0:10:26.92:0,27,273	0/0:16,0:8:16.69:0,17,215	0/0:28,0:28:60.14:0,60,755	0/0:20,0:20:42.05:0,42,506	0/0:25,0:25:57.10:0,57,708	0/0:41,0:39:99:0,99,1289	0/0:19,0:19:36.12:0,36,473	./.	./.	1/1:0,20:20:48.12:514,48,0	1/1:1,13:14:24.06:257,24,0	0/0:20,0:20:35.86:0,36,453	0/0:24,0:24:47.90:0,48,611	0/0:26,0:26:50.95:0,51,670	./.	./.	0/0:25,0:24:57.15:0,57,697	0/0:22,0:22:36.10:0,36,474	0/0:28,0:28:63.18:0,63,800	1/1:4,18:21:51.13:547,51,0	1/1:0,16:16:45.11:483,45,0	1/1:0,23:23:57.14:612,57,0	./.	./.	0/0:34,0:34:74.75:0,75,941	0/0:9,0:9:18.06:0,18,237
chr10	71918236	.	A	AG	322	PASS	AC=6;AF=0.136;AN=44;BaseQRankSum=4.667;DP=697;FS=0.000;HRun=1;HaplotypeScore=42.0379;InbreedingCoeff=0.6024;MQ=19.43;MQ0=364;MQRankSum=0.034;QD=7.85;ReadPosRankSum=-0.251;VQSLOD=0.3707;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:16:6.02:0,6,77	1/1:2,1:1:3.01:45,3,0	./.	./.	0/0:35,0:21:23.82:0,24,228	0/0:25,0:19:23.99:0,24,272	0/0:26,0:3:5.98:0,6,59	0/0:38,0:11:30.06:0,30,371	0/0:30,0:17:3.01:0,3,39	1/1:8,14:7:18.06:269,18,0	./.	0/0:20,0:12:20.83:0,21,191	0/0:22,0:14:14.97:0,15,175	0/0:19,0:13:11.98:0,12,135	0/0:32,0:14:14.90:0,15,175	0/0:28,0:19:32.84:0,33,330	1/1:12,4:5:9.03:126,9,0	./.	0/0:30,0:6:9.03:0,9,117	0/0:32,0:6:15.05:0,15,194	./.	0/0:25,0:11:17.95:0,18,193	0/0:16,0:8:3.01:0,3,39	0/0:23,0:9:3:0,3,27	./.	0/0:28,0:17:51.13:0,51,630	0/0:31,0:18:27.05:0,27,330	0/0:20,0:5:3.01:0,3,39
chr10	71918330	.	C	CA	792.85	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=6.143;DP=724;FS=1.827;HRun=2;HaplotypeScore=50.0677;InbreedingCoeff=0.9500;MQ=45.85;MQ0=24;MQRankSum=-2.285;QD=13.91;ReadPosRankSum=0.166;VQSLOD=2.7669;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:72.23:0,72,934	1/1:0,5:4:9.03:135,9,0	0/0:29,0:4:10.57:0,11,104	./.	0/0:25,0:22:36.12:0,36,462	0/0:27,0:27:54.16:0,54,680	0/0:22,0:20:36.12:0,36,463	0/0:38,0:38:99:0,111,1419	0/0:31,0:30:63.20:0,63,818	1/1:1,17:7:21.07:314,21,0	1/1:0,18:14:12.04:180,12,0	0/0:29,0:27:54.18:0,54,701	0/0:33,0:33:72.23:0,72,935	0/0:23,0:23:42.14:0,42,545	0/0:30,0:30:54.18:0,54,701	0/0:29,0:28:63.20:0,63,814	1/1:0,16:14:21.07:315,21,0	0/0:13,0:12:27.09:0,27,348	0/0:26,0:25:72.23:0,72,934	0/0:26,0:20:27.06:0,27,321	0/0:31,0:31:57.18:0,57,738	0/0:23,0:22:39.13:0,39,506	0/0:22,0:18:21.07:0,21,269	0/0:24,0:24:39.13:0,39,506	./.	0/0:39,0:37:99:0,111,1408	0/0:35,0:34:72.10:0,72,934	0/0:12,0:7:12.04:0,12,156
chr10	71920358	.	T	TTTG	3166.08	PASS	AB=0.970;AC=13;AF=0.241;AN=54;BaseQRankSum=3.889;DP=658;FS=1.726;HRun=0;HaplotypeScore=128.6710;InbreedingCoeff=0.5229;MQ=61.34;MQ0=6;MQRankSum=-2.176;QD=16.58;ReadPosRankSum=1.184;VQSLOD=3.2854;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:15:1.91:2,0,17	0/0:7,0:7:11.60:0,12,75	./.	0/0:25,0:22:3.01:0,3,36	0/0:34,0:34:57.03:0,57,673	0/0:13,0:13:21.02:0,21,248	0/0:27,0:26:39.05:0,39,458	0/0:31,0:30:29.79:0,30,303	0/0:21,0:21:21.06:0,21,268	0/1:24,0:21:2.64:3,0,133	0/0:16,0:16:26.94:0,27,178	1/1:13,7:18:36.12:664,36,0	1/1:14,7:20:51.11:893,51,0	0/0:23,0:23:51.09:0,51,643	0/0:32,0:32:47.15:0,47,591	0/0:28,0:28:42.10:0,42,517	0/1:17,0:17:10.53:11,0,66	0/1:13,0:17:16:16,0,79	0/0:31,0:26:39.09:0,39,493	0/0:33,0:33:58.87:0,59,700	0/0:33,0:33:47.91:0,48,528	0/1:19,4:23:11.21:323,0,11	1/1:16,6:22:36.11:645,36,0	1/1:21,6:27:51.01:778,51,0	0/0:21,0:20:9.09:0,9,150	0/0:30,0:28:20.69:0,21,475	0/0:25,0:25:45.15:0,45,603	0/0:7,0:7:12.03:0,12,143
chr10	71920360	.	TG	T	640.84	PASS	AB=0.864;AC=10;AF=0.179;AN=56;BaseQRankSum=9.978;DP=646;FS=3.260;HRun=1;HaplotypeScore=110.2290;InbreedingCoeff=0.6637;MQ=59.03;MQ0=6;MQRankSum=-6.500;QD=6.22;ReadPosRankSum=-2.122;VQSLOD=-0.0510;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:13:26.79:0,27,336	1/1:4,3:7:11.01:95,11,0	0/0:29,0:20:48.34:0,48,688	0/0:24,0:21:60.16:0,60,734	0/0:34,0:34:93.19:0,93,1254	0/0:12,0:12:36.12:0,36,495	0/0:26,0:25:71.91:0,72,895	0/0:28,0:27:78.23:0,78,1028	0/0:20,0:20:51.11:0,51,651	1/1:13,11:21:8.80:206,9,0	1/1:7,9:16:1.06:135,1,0	0/0:19,0:17:50.95:0,51,478	0/0:22,0:21:62.97:0,63,605	0/0:23,0:23:69.21:0,69,970	0/0:32,0:32:87.20:0,87,1157	0/0:26,0:26:78.10:0,78,1029	0/1:10,6:16:48.16:108,0,48	0/1:18,0:17:15.45:15,0,180	0/0:30,0:25:70.46:0,70,935	0/0:32,0:32:86.83:0,87,1242	0/0:33,0:33:99:0,99,1272	0/0:24,0:24:62.90:0,63,723	0/0:23,0:23:65.99:0,66,698	0/0:27,0:27:71.70:0,72,793	1/1:12,10:21:20.19:234,20,0	0/0:28,1:27:71.45:0,71,974	0/0:24,0:24:72.17:0,72,1006	0/0:9,0:9:24.01:0,24,287
chr10	71920362	.	TTG	T	621.34	PASS	AB=0.695;AC=6;AF=0.107;AN=56;BaseQRankSum=10.158;DP=643;FS=5.965;HRun=0;HaplotypeScore=121.6941;InbreedingCoeff=0.2628;MQ=57.10;MQ0=6;MQRankSum=-6.757;QD=7.14;ReadPosRankSum=-0.634;VQSLOD=2.9740;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:16:30.61:0,31,400	1/1:4,3:7:5.71:104,6,0	0/0:28,0:19:54.02:0,54,668	0/0:23,0:20:54.17:0,54,697	0/0:34,0:34:99:0,102,1690	0/0:12,0:12:30.10:0,30,516	0/0:26,0:25:71.91:0,72,1154	0/0:31,0:30:84.26:0,84,1238	0/0:18,0:18:48.16:0,48,795	0/1:14,10:21:35.31:159,0,35	0/1:7,9:16:18.37:155,0,18	0/0:18,0:16:48.15:0,48,652	0/0:21,0:20:60.20:0,60,865	0/0:24,0:24:72.24:0,72,1261	0/0:31,0:31:84.28:0,84,1390	0/0:24,0:24:72.07:0,72,1157	0/1:11,6:17:95.47:119,0,95	0/0:17,0:16:9.40:0,9,213	0/0:30,0:25:64.42:0,64,1037	0/0:33,0:33:86.80:0,87,1552	0/0:32,0:32:93.31:0,93,1480	0/0:23,0:23:63.20:0,63,839	0/0:24,0:24:66.21:0,66,879	0/0:27,0:27:71.92:0,72,1033	0/1:13,10:22:4.56:207,0,5	0/0:27,1:26:58.62:0,59,1193	0/0:24,0:24:69.23:0,69,1219	0/0:8,0:8:21.07:0,21,375
chr10	71920407	.	TG	T	672.64	PASS	AB=0.829;AC=7;AF=0.125;AN=56;BaseQRankSum=10.287;DP=627;FS=23.611;HRun=1;HaplotypeScore=117.2695;InbreedingCoeff=0.5817;MQ=50.68;MQ0=15;MQRankSum=-9.723;QD=7.56;ReadPosRankSum=2.226;VQSLOD=-0.4217;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:23:42.54:0,43,517	1/1:9,2:10:12.73:45,13,0	0/0:28,0:13:27.37:0,27,247	0/0:34,2:9:13.01:0,13,146	0/0:39,0:39:99:0,113,1361	0/0:17,0:17:51.14:0,51,657	0/0:22,0:22:63.16:0,63,786	0/0:29,0:29:83.68:0,84,1019	0/0:15,0:14:36.12:0,36,469	0/1:17,7:18:36.96:274,0,37	0/1:11,5:15:1.72:185,0,2	0/0:20,0:18:44.97:0,45,496	0/0:32,0:30:66.54:0,67,728	0/0:25,0:25:69.60:0,70,865	0/0:21,0:21:56.94:0,57,711	0/0:16,0:16:19.08:0,19,404	0/1:18,1:17:15.85:138,0,16	0/0:14,0:13:36.02:0,36,434	0/0:27,0:24:69.10:0,69,816	0/0:35,0:35:99:0,105,1263	0/0:20,0:20:60.09:0,60,753	0/0:15,0:15:35.93:0,36,369	0/0:20,0:20:45.40:0,45,514	0/0:23,0:23:63.13:0,63,717	1/1:15,4:18:20.49:169,20,0	0/0:23,0:22:53.99:0,54,743	0/0:22,0:22:66.19:0,66,840	0/0:10,0:10:27.08:0,27,343
chr10	71920408	.	GT	G	1289.63	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.146;DP=632;FS=23.024;HRun=8;HaplotypeScore=115.6698;InbreedingCoeff=0.9872;MQ=50.47;MQ0=16;MQRankSum=-9.441;QD=14.17;ReadPosRankSum=2.261;VQSLOD=2.1487;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:22:45.13:0,45,532	1/1:10,1:10:17.68:137,18,0	0/0:29,0:13:25.64:0,26,265	0/0:36,0:9:13.19:0,13,126	0/0:39,0:39:99:0,108,1281	0/0:17,0:17:50.18:0,50,586	0/0:21,0:21:54.17:0,54,652	0/0:29,0:29:75.22:0,75,894	0/0:15,0:14:36.11:0,36,434	1/1:19,6:19:23.60:361,24,0	1/1:14,2:15:31.40:261,31,0	0/0:20,0:18:35.81:0,36,308	0/0:31,0:29:59.44:0,59,499	0/0:25,0:25:66.14:0,66,757	0/0:20,0:20:54.16:0,54,648	0/0:15,0:15:31.62:0,32,345	1/1:15,4:18:35.73:328,36,0	0/0:14,0:13:30.09:0,30,362	0/0:29,0:26:69.14:0,69,792	0/0:36,0:36:99:0,102,1199	0/0:20,0:20:54.15:0,54,640	0/0:16,0:15:29.91:0,30,254	0/0:22,0:22:41.81:0,42,339	0/0:23,0:23:50.79:0,51,404	1/1:14,5:18:39.24:377,39,0	0/0:22,1:22:15.09:0,15,597	0/0:23,0:23:69.16:0,69,803	0/0:10,0:10:27.08:0,27,326
chr10	71920412	.	T	TTTTG	2626.26	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=9.538;DP=637;FS=19.503;HRun=0;HaplotypeScore=142.0576;InbreedingCoeff=0.8949;MQ=51.32;MQ0=18;MQRankSum=-10.933;QD=20.52;ReadPosRankSum=0.654;VQSLOD=2.2653;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:22:30.49:0,30,245	1/1:7,4:10:17.55:316,18,0	0/0:30,0:13:30.95:0,31,370	0/1:39,0:9:4.42:4,0,141	0/0:39,0:39:99:0,108,1821	0/0:16,0:17:49.05:0,49,854	0/0:21,0:21:54.18:0,54,922	0/0:28,0:28:75.24:0,75,1231	0/0:18,0:17:39.02:0,39,644	1/1:19,3:17:19.07:602,19,0	1/1:11,5:15:35.29:472,35,0	0/0:19,0:17:36.07:0,36,419	0/0:27,0:27:59.83:0,60,588	0/0:25,0:25:66.12:0,66,1084	0/0:20,0:19:54.18:0,54,900	0/0:14,0:14:31.64:0,32,451	1/1:10,10:18:41.51:681,42,0	0/0:17,0:16:31.16:0,31,419	0/0:27,0:25:69.17:0,69,1104	0/0:37,0:36:99:0,102,1691	0/0:20,0:20:57.17:0,57,938	0/0:15,0:14:30.02:0,30,318	0/0:21,0:21:43.57:0,44,447	0/0:23,0:23:51.04:0,51,530	1/1:11,9:19:39.05:726,39,0	0/0:25,1:25:7.56:0,8,951	0/0:25,0:25:72.22:0,72,1193	0/0:11,0:10:27.09:0,27,446
chr10	71920421	.	TG	T	959.81	PASS	AB=0.652;AC=5;AF=0.089;AN=56;BaseQRankSum=9.488;DP=608;FS=33.036;HRun=1;HaplotypeScore=101.5816;InbreedingCoeff=0.1621;MQ=50.41;MQ0=30;MQRankSum=-9.544;QD=10.91;ReadPosRankSum=0.134;VQSLOD=0.0654;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:21:35.46:0,35,209	0/1:7,5:11:6.16:98,0,6	0/0:31,0:13:21.35:0,21,252	0/0:38,0:9:9.09:0,9,103	0/0:34,0:34:99:0,102,1256	0/0:16,0:16:48.14:0,48,605	0/0:20,0:19:54.10:0,54,632	0/0:30,0:26:75.16:0,75,885	0/0:18,0:17:41.50:0,41,228	0/1:12,10:17:92.57:292,0,93	0/1:6,9:14:2.07:230,0,2	0/0:17,0:15:32.49:0,32,230	0/0:23,1:23:9.62:0,10,198	0/0:22,0:21:30.81:0,31,594	0/0:18,0:16:45.12:0,45,566	0/0:10,0:10:30.03:0,30,367	0/1:7,13:18:10.99:229,0,11	0/0:19,0:18:27.87:0,28,178	0/0:29,0:25:74.87:0,75,861	0/0:37,0:35:92.92:0,93,1151	0/0:18,0:18:54.04:0,54,630	0/0:15,0:12:22.72:0,23,123	0/0:19,0:18:11.98:0,12,155	0/0:17,0:17:45.86:0,46,255	0/1:8,11:18:8.97:229,0,9	0/0:24,1:23:60.82:0,61,778	0/0:27,0:27:81.22:0,81,1012	0/0:11,0:10:26.95:0,27,277
chr10	71920422	.	G	GTT	4313.60	PASS	AB=0.955;AC=25;AF=0.446;AN=56;BaseQRankSum=13.430;DP=620;FS=17.306;HRun=9;HaplotypeScore=103.0047;InbreedingCoeff=0.8783;MQ=50.08;MQ0=31;MQRankSum=-9.018;QD=17.12;ReadPosRankSum=2.504;VQSLOD=1.9614;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:27:33.03:285,33,0	1/1:11,0:11:16.24:125,16,0	0/0:31,0:13:22.80:0,23,197	0/0:38,0:9:10.45:0,10,95	0/0:33,0:33:96.21:0,96,1006	0/0:16,0:16:45.11:0,45,479	0/0:20,0:19:36:0,36,371	0/0:30,0:26:57.10:0,57,592	1/1:2,1:17:32.50:146,32,0	0/1:20,0:16:3.25:201,0,3	1/1:15,0:14:26.06:197,26,0	1/1:9,8:15:23.75:359,24,0	1/1:11,13:23:45.04:679,45,0	0/0:22,0:21:0.18:0,0,390	0/0:19,0:17:20.64:0,21,422	0/0:11,0:11:27.06:0,27,287	1/1:19,0:19:4.71:251,5,0	1/1:5,15:19:9.60:520,10,0	0/0:28,0:25:60.11:0,60,630	0/0:35,0:34:84.78:0,85,864	0/0:18,0:18:45.07:0,45,469	1/1:4,11:13:21.06:305,21,0	1/1:8,11:19:27.09:412,27,0	1/1:5,11:17:35.61:516,36,0	1/1:18,0:18:36.88:317,37,0	0/0:26,0:24:39.26:0,39,615	0/0:28,0:28:78.17:0,78,822	0/0:11,0:10:15.03:0,15,160
chr10	71921352	.	G	GA	2837.77	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.609;DP=638;FS=5.772;HRun=9;HaplotypeScore=81.1608;InbreedingCoeff=0.9428;MQ=66.00;MQ0=5;MQRankSum=1.868;QD=22.17;ReadPosRankSum=0.179;VQSLOD=4.3213;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:74.92:0,75,641	0/0:9,0:9:23.99:0,24,208	0/0:25,0:19:5.75:0,6,219	0/0:18,0:14:31.96:0,32,261	0/0:37,0:37:89.89:0,90,773	0/0:23,0:23:43.05:0,43,468	0/0:9,0:9:26.65:0,27,214	0/0:29,0:29:71.95:0,72,622	0/0:25,0:25:60:0,60,610	0/0:28,0:28:75.46:0,75,637	0/0:24,0:24:65.97:0,66,570	1/1:4,11:16:32.92:346,33,0	1/1:3,17:20:48.13:530,48,0	0/0:10,0:10:4.38:0,4,180	0/0:22,0:22:59.94:0,60,514	0/0:17,0:17:47.99:0,48,417	0/0:25,0:25:71.65:0,72,605	0/0:23,0:23:56.95:0,57,488	0/0:22,0:21:50.71:0,51,416	0/0:29,0:29:77.98:0,78,677	0/0:11,0:11:26.58:0,27,234	1/1:2,26:28:66.14:716,66,0	1/1:3,33:36:46:723,46,0	1/1:5,23:28:63.17:697,63,0	0/0:21,0:21:54.05:0,54,454	0/0:27,0:27:59.97:0,60,521	0/0:37,0:37:79.40:0,79,810	0/0:10,0:10:29.99:0,30,259
chr10	71924010	.	G	GA	1332.40	PASS	AB=0.720;AC=9;AF=0.167;AN=54;BaseQRankSum=6.677;DP=586;FS=1.267;HRun=7;HaplotypeScore=48.5019;InbreedingCoeff=0.8377;MQ=48.82;MQ0=32;MQRankSum=-8.312;QD=14.80;ReadPosRankSum=-0.611;VQSLOD=2.8745;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:26:43.31:0,43,408	1/1:0,7:5:15.05:179,15,0	./.	0/0:11,0:1:2.97:0,3,20	0/0:41,0:40:81.11:0,81,782	0/0:29,0:29:63.08:0,63,597	0/0:16,0:11:24.04:0,24,232	0/0:25,0:8:18.01:0,18,169	0/0:19,0:19:35.96:0,36,347	1/1:3,21:15:42.13:504,42,0	1/1:3,19:18:30.09:358,30,0	0/0:11,0:10:24.04:0,24,232	0/0:18,0:18:33.05:0,33,319	0/0:15,0:15:33.02:0,33,311	0/0:18,0:18:33.01:0,33,310	0/0:13,0:13:27.02:0,27,255	0/1:11,7:14:7.72:183,0,8	0/0:23,0:23:45.07:0,45,435	0/0:28,0:13:39.06:0,39,377	0/0:36,0:35:81.03:0,81,782	0/0:13,0:13:33.05:0,33,319	0/0:29,0:28:27.03:0,27,260	0/0:27,0:25:51.08:0,51,492	0/0:16,0:16:29.99:0,30,280	1/1:4,15:16:24.03:270,24,0	0/0:35,1:36:65.94:0,66,915	0/0:25,0:25:54.08:0,54,517	0/0:7,0:7:18.03:0,18,174
chr10	71924280	.	C	CA	612.17	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=11.565;DP=689;FS=0.958;HRun=9;HaplotypeScore=80.1006;InbreedingCoeff=0.9350;MQ=51.15;MQ0=38;MQRankSum=-0.357;QD=6.06;ReadPosRankSum=2.348;VQSLOD=1.1116;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:66.83:0,67,618	1/1:10,0:10:24.11:100,24,0	0/0:22,0:1:3:0,3,25	./.	0/0:46,0:46:99:0,105,911	0/0:28,0:28:59.94:0,60,515	0/0:15,1:16:6.93:0,7,265	0/0:26,0:21:41.98:0,42,365	0/0:30,0:28:68.97:0,69,599	1/1:21,0:21:50.89:210,51,0	1/1:24,0:20:43.04:180,43,0	0/0:24,0:23:47.96:0,48,417	0/0:21,0:20:47.94:0,48,413	0/0:27,0:27:53.99:0,54,469	0/0:22,0:22:50.99:0,51,443	0/0:25,0:25:65.99:0,66,573	1/1:24,0:23:35.22:152,35,0	0/0:17,0:16:29.99:0,30,260	0/0:20,0:14:29.02:0,29,240	0/0:30,3:33:14.61:0,15,585	0/0:23,0:23:47.98:0,48,416	0/0:20,0:18:29.99:0,30,260	0/0:23,0:18:44.99:0,45,390	0/0:22,0:24:55.05:0,55,455	1/1:22,0:19:32.43:142,32,0	0/0:26,0:24:45.61:0,46,458	0/0:41,1:42:59.37:0,59,744	0/0:12,0:12:20.99:0,21,182
chr10	71924281	.	A	AAC	3720.82	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=3.076;DP=691;FS=0.457;HRun=0;HaplotypeScore=78.6503;InbreedingCoeff=0.9129;MQ=51.04;MQ0=39;MQRankSum=-1.732;QD=35.44;ReadPosRankSum=3.342;VQSLOD=5.3883;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:30:63.21:0,63,1120	1/1:0,10:10:26.99:475,27,0	0/0:25,0:1:3.01:0,3,46	0/0:21,0:1:2.88:0,3,15	0/0:45,0:45:99:0,111,1627	0/0:28,0:28:66.17:0,66,962	0/0:20,0:17:35.48:0,35,511	0/0:26,0:21:57.15:0,57,774	0/0:30,0:28:72.22:0,72,1078	1/1:1,21:21:60.18:1028,60,0	1/1:2,23:22:48.16:842,48,0	0/0:24,0:23:57.13:0,57,806	0/0:20,0:19:51.12:0,51,752	0/0:27,0:27:63.18:0,63,903	0/0:22,0:22:57.18:0,57,834	0/0:25,0:25:66.22:0,66,1009	1/1:2,22:23:48.02:776,48,0	0/0:17,0:16:30.10:0,30,457	0/0:20,0:14:39.07:0,39,504	0/0:33,0:33:89.24:0,89,1240	0/0:23,0:23:57.12:0,57,801	0/0:20,0:18:30.10:0,30,458	0/0:23,0:18:45.15:0,45,676	0/0:25,0:25:60.09:0,60,842	1/1:2,21:20:36.07:600,36,0	0/0:24,1:23:10.26:0,10,827	0/0:42,0:42:99:0,105,1473	0/0:12,0:12:33.06:0,33,420
chr10	71925164	.	C	CAA	3201.73	PASS	AB=0.923;AC=11;AF=0.196;AN=56;BaseQRankSum=-9.622;DP=500;FS=1.557;HRun=7;HaplotypeScore=60.5229;InbreedingCoeff=0.8714;MQ=58.48;MQ0=18;MQRankSum=1.138;QD=27.13;ReadPosRankSum=1.613;VQSLOD=3.0176;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:51.15:0,51,594	1/1:0,4:7:12.04:197,12,0	0/0:14,0:11:31.62:0,32,331	0/0:14,0:11:17.85:0,18,286	0/0:21,0:21:63.12:0,63,716	0/0:21,0:21:48.14:0,48,559	0/0:11,0:9:27.08:0,27,312	0/0:25,0:25:69.20:0,69,804	0/0:16,0:16:45.13:0,45,523	1/1:5,19:24:60.20:961,60,0	1/1:2,23:25:66.18:1054,66,0	0/0:14,0:14:36.10:0,36,419	0/0:15,0:15:45.13:0,45,524	0/0:18,0:17:45.05:0,45,521	0/0:22,0:19:42.11:0,42,489	0/0:18,0:16:45.13:0,45,524	1/1:1,14:16:24.08:394,24,0	0/0:6,0:6:15:0,15,160	0/0:20,0:17:48.14:0,48,559	0/0:25,0:24:57.14:0,57,654	0/0:11,0:10:21.02:0,21,233	0/0:16,0:16:45.12:0,45,515	0/0:23,0:22:60.17:0,60,699	0/0:10,0:10:18.04:0,18,210	1/1:2,17:20:47.65:747,48,0	0/1:22,2:24:26.32:26,0,682	0/0:34,0:34:87.23:0,87,1012	0/0:8,0:8:24.07:0,24,279
chr10	71925597	.	G	GA	370.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.075;DP=605;FS=2.307;HRun=7;HaplotypeScore=52.5695;InbreedingCoeff=0.6426;MQ=46.75;MQ0=47;MQRankSum=-1.694;QD=21.81;ReadPosRankSum=0.529;VQSLOD=3.1097;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:37:72.11:0,72,695	0/0:12,0:12:33.05:0,33,318	0/0:18,0:1:3:0,3,29	0/0:21,0:3:6.01:0,6,57	0/0:22,0:19:42.05:0,42,405	0/0:27,0:27:69.11:0,69,666	0/0:15,0:14:24.03:0,24,232	0/0:30,0:27:57.05:0,57,541	0/0:26,0:26:51.07:0,51,487	0/0:30,0:27:81.08:0,81,772	0/0:23,0:20:38.84:0,39,364	0/0:19,0:18:48.08:0,48,464	0/0:17,0:16:42.06:0,42,406	0/0:15,0:12:30.05:0,30,290	0/0:26,0:24:57.09:0,57,550	0/0:21,0:19:54.09:0,54,521	0/0:23,0:19:42.07:0,42,406	1/1:2,14:14:35.16:465,35,0	0/0:26,0:17:45.07:0,45,434	0/0:22,0:22:42.01:0,42,396	0/0:22,0:21:54.08:0,54,516	0/0:21,0:17:39.06:0,39,376	0/0:19,0:18:42.07:0,42,405	0/0:16,0:16:0.92:0,1,261	0/0:14,0:13:24.04:0,24,232	0/0:27,0:25:69.05:0,69,653	0/0:25,1:23:50.93:0,51,492	0/0:8,0:8:15.02:0,15,145
chr10	71926146	.	A	AC	4720.56	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-9.055;DP=648;FS=0.388;HRun=2;HaplotypeScore=69.3899;InbreedingCoeff=0.9966;MQ=56.69;MQ0=15;MQRankSum=4.814;QD=32.33;ReadPosRankSum=4.019;VQSLOD=4.6805;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:34:84.24:1185,84,0	0/0:19,0:19:51.04:0,51,581	0/0:15,0:8:14.96:0,15,160	0/0:19,0:13:39.09:0,39,445	0/0:26,0:26:54.17:0,54,669	0/0:21,0:20:57.09:0,57,672	0/0:18,0:18:51.13:0,51,604	0/0:24,0:23:66.16:0,66,789	0/0:15,0:15:33.10:0,33,409	0/0:24,0:24:69.22:0,69,855	0/0:25,0:24:57.18:0,57,706	1/1:0,22:19:45.15:647,45,0	1/1:2,25:24:54.18:775,54,0	0/0:18,0:18:45.14:0,45,557	0/0:31,0:31:84.26:0,84,1040	0/0:22,0:22:54.17:0,54,669	0/0:23,0:23:48.15:0,48,595	0/0:19,0:19:45.14:0,45,557	0/0:29,0:13:33.10:0,33,409	0/0:28,0:28:78.03:0,78,954	0/0:33,0:33:96.21:0,96,1119	1/1:0,25:25:60.20:862,60,0	1/1:1,17:18:42.14:604,42,0	1/1:0,19:18:45.15:648,45,0	0/0:21,0:21:54.17:0,54,668	0/0:29,0:29:87.22:0,87,1029	0/0:29,0:29:81.25:0,81,1001	0/0:14,0:14:39.12:0,39,483
chr10	71928818	.	AT	A	1993.37	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.288;DP=503;FS=7.113;HRun=6;HaplotypeScore=48.2899;InbreedingCoeff=0.9473;MQ=67.13;MQ0=0;MQRankSum=2.856;QD=24.61;ReadPosRankSum=2.615;VQSLOD=3.3103;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:72.18:774,72,0	0/0:6,0:6:18.06:0,18,237	0/0:7,0:7:6.02:0,6,79	0/0:11,0:11:5.36:0,5,80	0/0:31,0:31:81.20:0,81,1043	0/0:20,0:20:57.16:0,57,722	0/0:13,0:13:36.06:0,36,453	0/0:39,0:39:99:0,117,1476	0/0:13,0:13:39.11:0,39,499	0/0:26,0:26:75.05:0,75,917	0/0:23,0:23:69.16:0,69,886	1/1:0,14:14:39.05:406,39,0	1/1:1,6:7:18.04:193,18,0	0/0:13,0:13:36.05:0,36,452	0/0:15,0:15:39.13:0,39,511	0/0:15,0:15:45.15:0,45,592	0/0:22,0:22:60.19:0,60,785	0/0:26,0:26:75.15:0,75,933	0/0:28,0:28:78.24:0,78,1009	0/0:30,0:30:78.23:0,78,997	0/0:7,0:7:18.02:0,18,192	1/1:0,6:6:15.04:161,15,0	1/1:3,13:16:33.05:355,33,0	1/1:1,9:10:27.07:290,27,0	0/0:27,0:27:81.24:0,81,1049	0/0:28,0:28:81.24:0,81,1027	0/0:14,0:14:42.14:0,42,553	0/0:8,0:8:24.08:0,24,316
chr10	71929291	.	T	TC	14201.21	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-18.560;DP=759;FS=1.875;HRun=3;HaplotypeScore=70.5328;InbreedingCoeff=0.9976;MQ=67.94;MQ0=0;MQRankSum=0.635;QD=43.30;ReadPosRankSum=6.117;VQSLOD=3.0897;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,48:48:99:2158,135,0	1/1:0,12:12:30.10:480,30,0	0/0:28,0:26:78.25:0,78,1071	0/0:42,0:42:99:0,117,1552	0/0:27,0:27:81.24:0,81,1098	0/0:22,0:22:66.20:0,66,905	0/0:20,0:20:57.19:0,57,796	0/0:40,0:40:99:0,114,1563	0/0:19,0:19:57.17:0,57,779	1/1:1,34:35:99:1556,102,0	1/1:0,23:23:63.21:1007,63,0	1/1:0,13:13:39.13:624,39,0	1/1:0,24:24:66.23:1055,66,0	0/0:15,0:15:45.15:0,45,628	0/0:28,0:28:81.27:0,81,1129	0/0:25,0:25:75.24:0,75,1029	1/1:2,33:35:84.29:1343,84,0	1/1:3,21:24:69.23:1087,69,0	0/0:21,0:21:54.18:0,54,754	0/0:34,0:34:99:0,102,1419	0/0:60,0:60:99:0,181,2431	1/1:1,31:32:81.28:1295,81,0	1/1:0,26:26:66.23:1055,66,0	1/1:0,33:33:93.32:1487,93,0	1/1:0,23:23:66.23:1055,66,0	0/0:24,1:25:27.27:0,27,959	0/0:20,0:19:57.19:0,57,795	0/0:5,0:5:15.05:0,15,210
chr10	71929573	.	A	AT	4701.19	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-13.574;DP=629;FS=1.244;HRun=3;HaplotypeScore=53.5435;InbreedingCoeff=0.9659;MQ=62.11;MQ0=1;MQRankSum=0.830;QD=38.85;ReadPosRankSum=1.940;VQSLOD=4.9306;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.27:0,90,1078	1/1:1,8:9:24.08:336,24,0	0/0:15,0:5:8.99:0,9,81	0/0:12,0:6:9.02:0,9,107	0/0:27,0:27:81.25:0,81,972	0/0:22,0:22:60.18:0,60,719	0/0:20,0:20:57.10:0,57,644	0/0:34,0:34:87.27:0,87,1044	0/0:30,0:30:90.28:0,90,1080	1/1:0,34:34:99:1426,102,0	1/1:2,18:19:48.16:672,48,0	0/0:16,0:16:48.15:0,48,575	0/0:24,0:24:69.21:0,69,825	0/0:13,0:13:36.11:0,36,431	0/0:24,0:24:66.20:0,66,792	0/0:23,0:23:63.17:0,63,743	1/1:0,29:29:87.29:1217,87,0	0/0:17,0:16:48.11:0,48,547	0/0:19,0:17:48.12:0,48,553	0/0:20,0:20:57.17:0,57,684	0/0:20,0:20:57.17:0,57,683	0/0:33,0:33:93.28:0,93,1113	0/0:18,0:18:48.15:0,48,576	0/0:18,0:18:51.13:0,51,598	1/1:0,29:29:75.25:1050,75,0	0/0:26,0:26:75.22:0,75,890	0/0:40,0:39:99:0,114,1367	0/0:4,0:4:12.04:0,12,144
chr10	71929929	.	T	TA	155.88	PASS	AB=0.571;AC=7;AF=0.125;AN=56;BaseQRankSum=5.888;DP=372;FS=0.000;HRun=0;HaplotypeScore=45.1894;InbreedingCoeff=0.6730;MQ=63.24;MQ0=0;MQRankSum=0.477;QD=7.09;ReadPosRankSum=1.618;VQSLOD=2.7358;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.22:0,66,921	0/0:9,0:9:27.09:0,27,378	0/0:4,0:4:6.02:0,6,73	0/0:7,0:7:15.01:0,15,159	0/0:29,0:29:81.25:0,81,1100	0/0:16,0:16:48.14:0,48,652	0/0:3,0:3:8.99:0,9,104	0/0:28,0:28:78.26:0,78,1090	0/0:9,0:9:27.07:0,27,358	0/0:20,0:20:60.11:0,60,783	0/0:17,0:17:51.16:0,51,684	0/1:2,6:7:5.58:98,0,6	1/1:1,5:6:17.85:132,18,0	0/0:9,0:9:24.08:0,24,335	0/0:8,0:8:24.07:0,24,318	0/0:13,0:13:39.12:0,39,531	0/0:13,0:13:39.12:0,39,529	0/0:9,0:9:25.13:0,25,127	0/0:11,0:11:33.08:0,33,441	0/0:22,0:22:66.17:0,66,840	0/0:2,0:2:6.02:0,6,84	0/0:4,0:4:11.19:0,11,53	1/1:6,1:7:5.92:43,6,0	1/1:1,0:1:1.25:3,1,0	0/0:19,0:19:57.16:0,57,751	0/0:27,0:27:81.26:0,81,1118	0/0:31,0:31:93.30:0,93,1284	0/0:18,0:18:54.12:0,54,700
chr10	71929930	.	T	TA	185.87	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.480;DP=370;FS=0.000;HRun=0;HaplotypeScore=46.3767;InbreedingCoeff=0.7968;MQ=63.19;MQ0=0;MQRankSum=0.015;QD=8.85;ReadPosRankSum=1.503;VQSLOD=2.9853;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.22:0,66,904	0/0:9,0:9:27.09:0,27,378	0/0:4,0:4:8.98:0,9,90	0/0:8,0:8:17.66:0,18,168	0/0:29,0:29:81.25:0,81,1086	0/0:16,0:16:45.15:0,45,628	0/0:3,0:3:8.99:0,9,104	0/0:28,0:28:81.26:0,81,1096	0/0:8,0:8:24.08:0,24,332	0/0:20,0:20:60.14:0,60,779	0/0:17,0:17:51.15:0,51,677	1/1:2,6:7:9.85:133,10,0	1/1:1,5:6:17.87:136,18,0	0/0:9,0:9:24.08:0,24,332	0/0:7,0:7:21.07:0,21,294	0/0:13,0:13:39.12:0,39,521	0/0:13,0:13:39.12:0,39,529	0/0:9,0:9:24.55:0,25,108	0/0:12,0:12:30.10:0,30,412	0/0:21,0:21:63.17:0,63,807	0/0:2,0:2:6.02:0,6,84	0/0:4,0:4:10.71:0,11,43	1/1:6,1:7:5.92:43,6,0	0/0:1,0:1:2.80:0,3,13	0/0:20,0:20:57.15:0,57,744	0/0:27,0:27:81.26:0,81,1110	0/0:31,0:31:93.30:0,93,1263	0/0:16,0:16:48.13:0,48,650
chr10	71931920	.	GA	G	1424.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.569;DP=576;FS=0.616;HRun=2;HaplotypeScore=58.3447;InbreedingCoeff=0.9865;MQ=72.92;MQ0=1;MQRankSum=1.168;QD=31.64;ReadPosRankSum=-1.347;VQSLOD=2.8914;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,43:44:99:1519,117,0	0/0:6,0:6:18.06:0,18,270	0/0:14,0:13:39.07:0,39,517	0/0:23,0:23:63.20:0,63,877	0/0:30,0:30:90.30:0,90,1347	0/0:16,0:16:48.16:0,48,719	0/0:24,0:24:69.22:0,69,1012	0/0:21,0:21:57.18:0,57,836	0/0:17,0:17:51.17:0,51,763	0/0:27,0:23:69.23:0,69,1035	0/0:15,0:14:38.88:0,39,584	0/0:13,0:13:39.13:0,39,585	0/0:18,0:18:54.18:0,54,809	0/0:17,0:17:51.16:0,51,746	0/0:12,0:12:36.11:0,36,520	0/0:17,0:17:45.13:0,45,635	0/0:43,0:38:96.30:0,96,1411	0/0:10,0:9:27.09:0,27,403	0/0:19,0:19:57.18:0,57,831	0/0:26,0:26:78.25:0,78,1148	0/0:31,0:31:93.31:0,93,1392	0/0:21,0:21:63.21:0,63,943	0/0:22,0:22:60.20:0,60,899	0/0:23,0:23:69.23:0,69,1033	0/0:17,0:15:33.11:0,33,494	0/0:22,0:22:63.21:0,63,927	0/0:20,0:20:60.19:0,60,874	0/0:7,0:7:21.07:0,21,315
chr10	71933840	.	CA	C	2262.89	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.337;DP=574;FS=2.233;HRun=4;HaplotypeScore=53.4016;InbreedingCoeff=0.9448;MQ=49.45;MQ0=31;MQRankSum=0.118;QD=24.60;ReadPosRankSum=1.829;VQSLOD=2.4897;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:78.22:0,78,1069	1/1:0,9:7:18.06:216,18,0	0/0:14,0:1:3.01:0,3,31	0/0:10,0:4:9.03:0,9,115	0/0:24,0:24:60.20:0,60,839	0/0:21,0:21:51.17:0,51,712	0/0:22,0:22:42.14:0,42,587	0/0:35,0:28:78.26:0,78,1091	0/0:25,0:25:45.15:0,45,630	1/1:2,21:23:60.17:709,60,0	1/1:0,15:15:36.11:432,36,0	0/0:21,0:21:51.04:0,51,648	0/0:13,0:13:33.09:0,33,430	0/0:16,0:16:39.12:0,39,527	0/0:27,0:27:54:0,54,739	0/0:20,0:20:51.17:0,51,714	1/1:0,18:17:42.13:504,42,0	0/0:19,0:19:51.17:0,51,714	0/0:24,0:19:51.17:0,51,712	0/0:23,0:23:54.18:0,54,756	0/0:20,0:19:39.60:0,40,547	0/0:24,0:23:60.20:0,60,840	0/0:16,0:16:45.15:0,45,629	0/0:14,0:14:24.07:0,24,319	1/1:2,25:26:48.15:576,48,0	0/0:21,1:21:27.20:0,27,789	0/0:23,0:22:35.91:0,36,481	0/0:11,0:10:27.09:0,27,378
chr10	71934425	.	AACAC	A	1740.35	PASS	AB=0.928;AC=26;AF=0.481;AN=54;BaseQRankSum=8.049;DP=534;FS=0.000;HRun=0;HaplotypeScore=111.8441;InbreedingCoeff=0.7126;MQ=58.95;MQ0=10;MQRankSum=-6.640;QD=6.49;ReadPosRankSum=1.052;VQSLOD=2.2870;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:24:14.61:122,15,0	1/1:3,0:5:3:28,3,0	./.	0/0:28,0:18:3.01:0,3,61	0/0:14,0:17:20.78:0,21,361	0/0:25,0:31:58.68:0,59,1088	0/0:17,0:17:12.04:0,12,261	0/0:20,0:18:11.97:0,12,166	0/0:13,0:13:33.10:0,33,650	1/1:13,0:23:21.85:217,22,0	1/1:13,0:21:18.02:166,18,0	1/1:7,6:14:9.02:122,9,0	1/1:7,6:16:13.79:238,14,0	0/0:11,0:16:8.25:0,8,92	0/0:16,0:17:29.82:0,30,558	0/0:14,0:23:30.10:0,30,613	1/1:15,0:25:12.01:112,12,0	1/1:12,0:14:3:28,3,0	0/0:15,0:15:8.50:0,8,91	0/1:17,1:18:14.68:15,0,456	0/0:17,0:15:14.79:0,15,268	1/1:13,10:23:18.53:283,19,0	1/1:18,6:23:12.50:169,13,0	1/1:14,12:27:21.06:311,21,0	1/1:6,0:12:11.99:106,12,0	0/0:13,0:18:14.85:0,15,651	0/1:18,1:19:26.31:26,0,274	0/0:7,0:7:12.04:0,12,284
chr10	71936101	.	GC	G	3087.25	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.423;DP=610;FS=5.556;HRun=2;HaplotypeScore=57.8009;InbreedingCoeff=0.9583;MQ=56.28;MQ0=36;MQRankSum=3.275;QD=28.32;ReadPosRankSum=2.240;VQSLOD=3.0744;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:20:45.15:0,45,664	0/0:15,0:15:39.13:0,39,584	0/0:36,0:5:14.07:0,14,154	0/0:30,0:2:6.02:0,6,90	0/0:33,0:33:84.28:0,84,1255	0/0:19,0:19:48.16:0,48,708	0/0:15,0:12:33.11:0,33,493	0/0:17,0:15:45.15:0,45,672	0/0:13,0:13:36.08:0,36,514	0/0:33,0:31:93.28:0,93,1370	0/0:23,0:21:60.20:0,60,882	1/1:2,17:18:45.15:584,45,0	1/1:3,24:24:60.14:779,60,0	0/0:17,0:16:42.14:0,42,628	0/0:29,0:28:69.23:0,69,1034	0/0:19,0:17:42.14:0,42,630	0/0:24,0:21:54.18:0,54,809	0/0:16,0:13:30.07:0,30,449	0/0:17,0:14:42.14:0,42,627	0/0:15,0:14:39.13:0,39,584	0/0:38,0:36:84.28:0,84,1251	1/1:0,23:23:60.20:779,60,0	1/1:0,21:21:54.18:701,54,0	1/1:2,17:17:33.10:418,33,0	0/0:21,0:21:60.20:0,60,888	0/0:16,0:16:48.16:0,48,710	0/0:23,0:23:63.20:0,63,922	0/0:6,0:3:9.03:0,9,135
chr10	71936170	.	G	GGAGA	875.57	PASS	AB=0.992;AC=22;AF=0.611;AN=36;BaseQRankSum=-1.051;DP=534;FS=5.263;HRun=0;HaplotypeScore=105.6722;InbreedingCoeff=0.1811;MQ=58.65;MQ0=31;MQRankSum=-1.628;QD=3.30;ReadPosRankSum=-2.369;VQSLOD=1.3361;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:33:3:0,3,28	./.	./.	./.	0/1:26,0:25:0:0,0,0	0/0:19,0:17:0:0,0,0	0/1:13,0:13:0.13:0,0,0	1/1:30,0:28:10.71:103,11,0	1/1:8,6:14:11.91:278,12,0	0/1:17,0:17:14.46:80,0,14	./.	./.	0/0:21,0:18:2.65:0,3,36	./.	1/1:14,1:14:9.01:174,9,0	./.	0/1:20,0:20:33.01:49,0,33	1/1:18,0:12:2.03:5,2,0	0/1:17,0:16:37.83:39,0,38	0/1:16,0:16:0.11:0,0,0	1/1:19,0:18:3.01:39,3,0	0/0:16,0:14:2.99:0,3,24	./.	1/1:22,0:18:2.69:32,3,0	./.	1/1:16,0:15:12.04:164,12,0	1/1:20,0:19:2.97:20,3,0	./.
chr10	71936199	.	GAGAGAGAGAGAGAGAGAGGA	G	628.49	PASS	AB=0.940;AC=7;AF=0.125;AN=56;BaseQRankSum=1.722;DP=572;FS=1.738;HRun=0;HaplotypeScore=189.9117;InbreedingCoeff=-0.1685;MQ=45.12;MQ0=42;MQRankSum=0.214;QD=4.13;ReadPosRankSum=-4.267;VQSLOD=1.7674;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,24:29:99:289,0,117	0/1:9,0:9:28.37:28,0,663	0/0:18,0:4:8.02:0,8,165	0/0:34,0:6:8.31:0,8,251	0/0:32,0:31:55.04:0,55,1382	0/0:16,0:13:15.01:0,15,574	0/0:16,0:15:23.80:0,24,785	0/0:29,0:25:68.45:0,68,1571	0/0:14,0:13:21.01:0,21,1167	0/1:22,0:19:85.74:86,0,1138	0/0:19,0:17:12.48:0,12,278	0/1:21,0:20:99:171,0,639	0/0:18,0:18:29.53:0,30,868	0/0:21,0:18:21.85:0,22,377	0/0:18,0:17:39.60:0,40,1296	0/0:16,0:13:24.08:0,24,1250	0/1:20,0:19:99:105,0,1196	0/0:20,0:12:7.97:0,8,204	0/0:24,0:20:47.65:0,48,1591	0/0:24,0:24:36.51:0,37,1189	0/0:22,0:19:42.10:0,42,1792	0/1:21,0:19:26.76:27,0,176	0/0:19,0:18:9.35:0,9,151	0/1:26,0:22:51.38:51,0,956	0/0:19,0:18:4.42:0,4,45	0/0:21,0:19:52.73:0,53,2593	0/0:18,0:17:33.11:0,33,1120	0/0:2,0:2:6.02:0,6,99
chr10	71936213	.	GAGAGGA	G	2089.22	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=3.234;DP=565;FS=5.927;HRun=0;HaplotypeScore=107.5268;InbreedingCoeff=0.7410;MQ=49.72;MQ0=24;MQRankSum=-0.726;QD=9.95;ReadPosRankSum=0.440;VQSLOD=1.9247;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:25:6.02:73,6,0	1/1:12,0:12:25.90:372,26,0	0/0:24,0:12:26.23:0,26,427	0/0:35,0:10:27.92:0,28,440	0/0:33,0:32:51.09:0,51,831	0/0:22,0:19:33.07:0,33,532	0/0:18,0:17:33.04:0,33,511	0/0:34,0:30:54.18:0,54,908	0/0:15,0:14:27.05:0,27,545	1/1:20,0:18:13.68:427,14,0	0/0:16,0:14:0:0,0,0	1/1:20,0:20:39:561,39,0	1/1:19,0:19:3.01:37,3,0	0/0:16,0:13:18.86:0,19,204	0/0:16,0:15:35.61:0,36,642	0/0:15,0:12:24.08:0,24,465	1/1:20,0:19:14.70:435,15,0	1/1:11,0:8:2.67:13,3,0	0/0:21,0:17:30.10:0,30,550	0/0:24,0:24:36.03:0,36,573	0/0:23,0:20:41.91:0,42,675	1/1:4,17:21:6.02:101,6,0	0/1:15,0:15:0.02:0,0,0	0/1:25,0:23:34.85:250,0,35	0/1:20,0:20:0.01:0,0,1	0/0:20,0:18:36.09:0,36,835	0/0:18,0:17:27.04:0,27,419	0/0:5,0:5:15.05:0,15,249
chr10	71936217	.	GGA	G	2519.87	PASS	AB=0.761;AC=18;AF=0.346;AN=52;BaseQRankSum=2.812;DP=543;FS=1.108;HRun=0;HaplotypeScore=79.4297;InbreedingCoeff=0.6494;MQ=56.19;MQ0=23;MQRankSum=-2.522;QD=12.66;ReadPosRankSum=0.093;VQSLOD=3.2890;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:26:35.60:59,0,36	1/1:11,0:11:27.09:413,27,0	0/0:27,0:15:23.15:0,23,493	0/0:37,0:12:28.72:0,29,496	0/0:30,0:30:54.11:0,54,836	0/0:14,6:18:36.08:0,36,552	0/0:19,0:18:38.81:0,39,594	0/0:33,0:30:71.41:0,71,1268	0/0:13,0:13:36.07:0,36,462	1/1:18,3:19:44.18:605,44,0	./.	1/1:20,0:20:45.02:652,45,0	0/1:4,10:14:30.42:31,0,30	0/0:12,0:11:18.86:0,19,204	0/0:19,0:18:12.26:0,12,614	0/0:14,0:11:24.08:0,24,416	1/1:18,1:18:20.65:513,21,0	1/1:2,9:9:0.47:1,0,0	0/0:23,0:19:28.65:0,29,776	0/0:18,0:18:35.79:0,36,555	0/0:20,0:18:41.91:0,42,582	1/1:20,0:20:5.98:55,6,0	0/1:1,14:15:0.17:1,0,0	1/1:21,0:20:26.80:356,27,0	./.	0/1:16,1:16:12.74:13,0,615	0/0:18,0:18:13.13:0,13,406	0/0:5,0:5:15.05:0,15,249
chr10	71938252	.	CA	C	3774.82	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.280;DP=660;FS=0.000;HRun=2;HaplotypeScore=73.4432;InbreedingCoeff=0.9990;MQ=80.15;MQ0=0;MQRankSum=-2.863;QD=35.95;ReadPosRankSum=1.708;VQSLOD=4.1897;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.30:0,90,1349	1/1:1,14:15:39.13:506,39,0	0/0:18,0:18:50.31:0,50,666	0/0:17,0:17:44.97:0,45,606	0/0:37,0:37:99:0,111,1664	0/0:31,0:31:90.30:0,90,1345	0/0:26,0:26:72.24:0,72,1059	0/0:32,0:32:96.32:0,96,1421	0/0:14,0:14:42.13:0,42,607	1/1:0,26:26:78.25:1013,78,0	1/1:0,21:21:63.20:815,63,0	0/0:18,0:18:54.18:0,54,809	0/0:25,0:25:72.23:0,72,1059	0/0:22,0:22:66.21:0,66,969	0/0:34,0:34:99:0,102,1528	0/0:24,0:24:72.24:0,72,1061	1/1:1,22:23:60.19:779,60,0	0/0:15,0:15:45.14:0,45,654	0/0:18,0:18:54.18:0,54,807	0/0:33,0:33:96.30:0,96,1398	0/0:28,0:28:84.27:0,84,1237	0/0:31,0:31:90.30:0,90,1331	0/0:22,0:22:66.22:0,66,987	0/0:15,0:15:42.13:0,42,611	1/1:0,20:20:51.17:662,51,0	0/0:20,1:21:21.24:0,21,815	0/0:32,0:32:96.26:0,96,1384	0/0:12,0:12:36.12:0,36,540
chr10	71939618	.	CTTATTTATTTAT	C	1663.96	PASS	AC=22;AF=0.458;AN=48;BaseQRankSum=2.672;DP=253;FS=11.302;HRun=0;HaplotypeScore=78.0805;InbreedingCoeff=0.6506;MQ=72.91;MQ0=2;MQRankSum=-2.537;QD=16.47;ReadPosRankSum=2.623;VQSLOD=0.3221;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:11:3.01:69,3,0	./.	./.	./.	0/0:12,0:12:12.03:0,12,498	0/0:17,0:17:27.09:0,27,1198	0/0:4,0:4:6.02:0,6,349	0/0:29,0:27:21.05:0,21,375	0/0:3,0:3:6.02:0,6,208	1/1:1,7:8:20.74:578,21,0	1/1:5,3:8:6.02:206,6,0	1/1:1,5:6:3.01:103,3,0	1/1:5,0:5:6.01:111,6,0	0/0:4,0:4:12.04:0,12,537	0/0:4,0:4:3.01:0,3,175	0/0:8,0:9:12.04:0,12,526	1/1:12,14:27:6.02:167,6,0	1/1:6,9:15:2.92:17,3,0	0/0:10,0:11:12.04:0,12,402	0/0:4,0:7:9.03:0,9,293	./.	1/1:1,0:1:3.01:73,3,0	1/1:4,2:6:2.56:102,3,0	1/1:3,0:3:6.02:97,6,0	1/1:4,7:11:9.03:308,9,0	0/0:3,0:5:9.03:0,9,309	0/0:6,0:13:9.03:0,9,470	0/0:16,0:19:6.02:0,6,278
chr10	71940285	.	GCT	G	2979.35	PASS	AB=0.913;AC=11;AF=0.196;AN=56;BaseQRankSum=9.758;DP=479;FS=4.341;HRun=0;HaplotypeScore=60.7018;InbreedingCoeff=0.8637;MQ=86.03;MQ0=0;MQRankSum=-2.573;QD=29.21;ReadPosRankSum=0.747;VQSLOD=4.7694;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.24:0,69,1217	1/1:0,8:8:24.08:336,24,0	0/0:22,0:21:60.19:0,60,1018	0/0:13,0:13:29.42:0,29,536	0/0:15,0:15:42.12:0,42,707	0/0:20,0:20:57.18:0,57,990	0/0:29,0:29:74.10:0,74,1329	0/0:29,0:29:81.28:0,81,1436	0/0:18,0:18:54.19:0,54,966	1/1:0,20:20:60.19:823,60,0	1/1:0,15:15:36.03:459,36,0	0/0:11,0:11:33.10:0,33,560	0/0:11,0:11:33.11:0,33,594	0/0:13,0:13:39.13:0,39,679	0/0:12,0:12:36.12:0,36,633	0/0:11,0:11:33.11:0,33,585	1/1:2,26:28:78.26:1092,78,0	0/0:23,0:23:63.22:0,63,1124	0/0:19,0:19:53.85:0,54,927	0/0:16,0:16:45.15:0,45,809	0/0:25,0:25:72.25:0,72,1297	0/0:6,0:6:18.06:0,18,324	0/0:13,0:13:33.09:0,33,560	0/0:23,0:23:66.23:0,66,1182	1/1:0,10:10:30.10:420,30,0	0/1:19,2:21:26.85:27,0,859	0/0:19,0:19:54.18:0,54,961	0/0:2,0:2:6.02:0,6,108
chr10	71940580	.	AGC	A	2007.85	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.528;DP=685;FS=1.403;HRun=0;HaplotypeScore=108.7304;InbreedingCoeff=0.9949;MQ=64.71;MQ0=4;MQRankSum=-11.863;QD=23.62;ReadPosRankSum=1.296;VQSLOD=3.8848;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:99:0,120,2381	1/1:2,4:7:20.94:198,21,0	0/0:36,0:30:84.26:0,84,1613	0/0:47,0:40:93.68:0,94,2196	0/0:16,0:16:48.16:0,48,959	0/0:27,0:26:78.25:0,78,1544	0/0:22,0:22:66.23:0,66,1304	0/0:41,0:41:99:0,123,2421	0/0:20,0:20:60.21:0,60,1200	1/1:9,11:21:43.89:546,44,0	1/1:11,12:23:61.83:596,62,0	0/0:24,0:24:72.25:0,72,1440	0/0:30,0:30:90.29:0,90,1767	0/0:20,0:20:57.20:0,57,1144	0/0:33,0:33:99:0,99,1978	0/0:21,0:21:63.22:0,63,1270	1/1:8,12:24:49.39:559,49,0	0/0:24,0:24:72.24:0,72,1336	0/0:19,0:19:57.16:0,57,1083	0/0:18,0:18:54.17:0,54,1020	0/0:25,0:24:69.24:0,69,1386	0/0:16,0:14:39.12:0,39,750	0/0:20,0:21:14.76:0,15,923	0/0:28,0:27:81.26:0,81,1584	1/1:3,5:10:29.92:284,30,0	0/0:24,1:24:40.40:0,40,1326	0/0:23,0:23:69.24:0,69,1356	0/0:22,0:22:66.23:0,66,1329
chr10	71940583	.	AAC	A	1556.31	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.634;DP=687;FS=0.449;HRun=0;HaplotypeScore=110.5543;InbreedingCoeff=0.9793;MQ=66.63;MQ0=4;MQRankSum=-11.797;QD=17.89;ReadPosRankSum=2.805;VQSLOD=3.8825;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:99:0,126,2382	1/1:4,4:8:12.30:155,12,0	0/0:37,0:31:89.98:0,90,1652	0/0:44,0:38:82.15:0,82,1973	0/0:15,0:15:45.15:0,45,853	0/0:29,0:28:84.27:0,84,1564	0/0:23,0:23:69.24:0,69,1285	0/0:44,0:44:99:0,132,2458	0/0:20,0:20:60.19:0,60,1101	1/1:11,11:22:49.91:509,50,0	1/1:9,12:21:48.21:469,48,0	0/0:24,0:24:72.23:0,72,1347	0/0:27,0:27:81.26:0,81,1525	0/0:19,0:19:57.20:0,57,1099	0/0:32,0:32:96.33:0,96,1831	0/0:21,0:21:63.20:0,63,1174	1/1:13,12:25:22.45:428,22,0	0/0:24,0:23:72.17:0,72,1249	0/0:18,0:18:54.15:0,54,1003	0/0:18,0:18:51.17:0,51,983	0/0:27,0:27:81.26:0,81,1499	0/0:14,0:13:36.12:0,36,695	0/0:22,0:22:56.22:0,56,1044	0/0:27,0:26:78.27:0,78,1504	1/1:6,5:11:9.26:166,9,0	0/0:24,1:24:43.45:0,43,1298	0/0:24,0:24:72.25:0,72,1357	0/0:22,0:22:66.23:0,66,1274
chr10	71940584	.	AC	A	1748.24	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.682;DP=695;FS=0.454;HRun=1;HaplotypeScore=96.6161;InbreedingCoeff=0.9876;MQ=67.35;MQ0=4;MQRankSum=-12.544;QD=20.33;ReadPosRankSum=3.118;VQSLOD=3.9460;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:99:0,129,2006	1/1:6,2:8:18.49:178,18,0	0/0:38,0:32:90.29:0,90,1410	0/0:45,0:39:99:0,110,1656	0/0:15,0:15:45.15:0,45,716	0/0:30,0:29:84.27:0,84,1310	0/0:23,0:23:69.20:0,69,1054	0/0:44,0:44:99:0,132,2026	0/0:20,0:20:60.18:0,60,912	1/1:17,5:22:50.03:585,50,0	1/1:20,0:20:45.85:549,46,0	0/0:24,0:24:72.22:0,72,1125	0/0:29,0:29:87.23:0,87,1314	0/0:19,0:19:57.19:0,57,907	0/0:32,0:32:96.31:0,96,1509	0/0:21,0:21:63.20:0,63,981	1/1:25,0:25:26.18:425,26,0	0/0:25,0:24:74.82:0,75,1062	0/0:19,0:19:57.14:0,57,855	0/0:17,0:17:51.17:0,51,812	0/0:27,0:27:81.25:0,81,1239	0/0:14,0:13:36.12:0,36,575	0/0:22,0:22:54.66:0,55,858	0/0:27,0:26:78.27:0,78,1246	1/1:8,3:11:10.36:183,10,0	0/0:25,0:24:46.05:0,46,1075	0/0:26,0:26:75.21:0,75,1127	0/0:22,0:22:66.23:0,66,1053
chr10	71940585	.	C	CAACAA	2434.32	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.026;DP=701;FS=2.034;HRun=0;HaplotypeScore=155.6861;InbreedingCoeff=0.9953;MQ=68.43;MQ0=4;MQRankSum=-12.968;QD=26.46;ReadPosRankSum=1.952;VQSLOD=3.3896;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:99:0,117,2371	1/1:8,0:8:15.33:208,15,0	0/0:39,0:33:80.76:0,81,1566	0/0:45,0:39:99:0,99,1883	0/0:15,0:15:42.14:0,42,865	0/0:30,0:29:78.23:0,78,1501	0/0:23,0:23:63.22:0,63,1276	0/0:44,0:44:99:0,120,2371	0/0:19,0:19:51.18:0,51,1052	1/1:24,0:24:61.04:812,61,0	1/1:20,0:20:54.79:840,55,0	0/0:23,0:23:63.22:0,63,1320	0/0:29,0:29:81.23:0,81,1593	0/0:19,0:19:57.20:0,57,1164	0/0:33,0:33:90.28:0,90,1824	0/0:21,0:21:57.19:0,57,1194	1/1:22,5:28:47.54:529,48,0	0/0:24,0:24:49.92:0,50,1181	0/0:19,0:19:57.17:0,57,1108	0/0:17,0:17:51.17:0,51,1031	0/0:26,0:26:69.22:0,69,1333	0/0:14,0:13:36.12:0,36,755	0/0:22,0:22:53.02:0,53,1084	0/0:27,0:26:75.26:0,75,1566	1/1:12,0:12:20.09:219,20,0	0/0:25,0:24:37.47:0,37,1332	0/0:26,0:26:72.22:0,72,1414	0/0:23,0:23:66.23:0,66,1384
chr10	71940587	.	ACAG	A	2456.25	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.638;DP=698;FS=0.907;HRun=0;HaplotypeScore=121.6868;InbreedingCoeff=0.9985;MQ=70.46;MQ0=4;MQRankSum=-12.561;QD=26.99;ReadPosRankSum=2.475;VQSLOD=3.5841;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:99:0,117,2546	1/1:8,1:9:21.05:250,21,0	0/0:39,0:33:90.11:0,90,1817	0/0:45,0:39:99:0,108,2053	0/0:14,0:14:42.13:0,42,902	0/0:29,0:28:81.17:0,81,1548	0/0:21,0:21:63.20:0,63,1355	0/0:43,0:43:99:0,126,2647	0/0:18,0:18:51.16:0,51,1107	1/1:19,4:23:68.97:773,69,0	1/1:12,7:19:56.94:637,57,0	0/0:23,0:23:63.22:0,63,1448	0/0:30,0:30:87.23:0,87,1761	0/0:19,0:19:57.16:0,57,1201	0/0:32,0:32:93.25:0,93,1957	0/0:22,0:22:66.19:0,66,1386	1/1:23,4:28:65.60:701,66,0	0/0:25,0:24:68.99:0,69,1302	0/0:21,0:21:63.17:0,63,1253	0/0:17,0:17:51.16:0,51,1106	0/0:26,0:26:72.22:0,72,1487	0/0:14,0:13:36.12:0,36,822	0/0:20,0:20:54.90:0,55,1168	0/0:27,0:26:75.24:0,75,1632	1/1:11,1:12:24.01:271,24,0	0/0:26,0:25:33.44:0,33,1485	0/0:28,0:28:84.11:0,84,1622	0/0:23,0:23:69.22:0,69,1537
chr10	71940933	.	CTT	C	456.54	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.219;DP=544;FS=2.426;HRun=3;HaplotypeScore=69.6251;InbreedingCoeff=0.9959;MQ=74.31;MQ0=0;MQRankSum=-1.336;QD=35.12;ReadPosRankSum=1.272;VQSLOD=3.3887;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.28:0,81,1564	0/0:8,0:8:24.08:0,24,463	0/0:15,0:15:45.15:0,45,869	0/0:11,0:11:30.57:0,31,568	0/0:27,0:27:81.27:0,81,1534	0/0:25,0:25:75.26:0,75,1449	0/0:25,0:25:72.25:0,72,1383	0/0:35,0:35:99:0,103,1965	0/0:23,0:23:69.19:0,69,1260	0/0:28,0:28:81.28:0,81,1564	0/0:17,0:17:48.16:0,48,926	0/0:22,0:22:66.23:0,66,1275	0/0:20,0:20:60.21:0,60,1159	0/0:13,0:13:39.13:0,39,754	0/0:10,0:10:30.10:0,30,580	0/0:21,0:21:63.22:0,63,1211	0/0:12,0:12:33.11:0,33,637	1/1:0,13:13:36.12:551,36,0	0/0:19,0:19:57.20:0,57,1097	0/0:35,0:35:99:0,102,1956	0/0:15,0:15:45.15:0,45,869	0/0:12,0:12:30.10:0,30,575	0/0:12,0:12:36.12:0,36,695	0/0:16,0:16:48.16:0,48,927	0/0:22,0:22:63.21:0,63,1181	0/0:23,0:23:69.24:0,69,1334	0/0:19,0:17:57.20:0,57,1077	0/0:19,0:19:51.17:0,51,985
chr10	71940970	.	T	TG	3725.44	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-11.303;DP=608;FS=1.399;HRun=3;HaplotypeScore=55.4472;InbreedingCoeff=0.9997;MQ=88.99;MQ0=0;MQRankSum=-2.475;QD=38.01;ReadPosRankSum=2.197;VQSLOD=4.0583;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.20:0,75,875	1/1:1,11:12:33.11:462,33,0	0/0:18,0:18:42.11:0,42,493	0/0:26,0:26:51.30:0,51,703	0/0:32,0:32:90.26:0,90,1067	0/0:21,0:21:60.17:0,60,708	0/0:33,0:33:93.28:0,93,1116	0/0:35,0:35:96.27:0,96,1124	0/0:21,0:21:60.18:0,60,720	1/1:3,22:25:69.23:955,69,0	1/1:0,22:22:63.21:881,63,0	0/0:29,0:29:81.25:0,81,972	0/0:21,0:21:63.18:0,63,745	0/0:18,0:18:54.15:0,54,636	0/0:13,0:13:36.11:0,36,432	0/0:20,0:20:60.18:0,60,720	1/1:0,20:20:54.18:756,54,0	0/0:11,0:11:30.09:0,30,359	0/0:17,0:17:51.16:0,51,612	0/0:42,0:42:99:0,123,1464	0/0:16,0:16:45.13:0,45,529	0/0:21,0:21:63.18:0,63,745	0/0:13,0:13:39.12:0,39,468	0/0:21,0:20:60.18:0,60,720	1/1:2,17:19:48.16:672,48,0	0/0:25,0:25:72.22:0,72,864	0/0:21,0:19:57.17:0,57,682	0/0:11,0:11:33.06:0,33,370
chr10	71942029	.	CACACACATACAT	C	4112.50	PASS	AB=0.964;AC=11;AF=0.196;AN=56;BaseQRankSum=10.583;DP=790;FS=4.824;HRun=0;HaplotypeScore=252.0945;InbreedingCoeff=0.8471;MQ=61.03;MQ0=8;MQRankSum=-4.604;QD=38.43;ReadPosRankSum=0.021;VQSLOD=2.9850;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:57.20:0,57,3146	1/1:2,3:5:9.03:326,9,0	0/0:57,0:29:60.19:0,60,2656	0/0:49,0:36:87.28:0,87,3679	0/0:35,0:35:87.30:0,87,4848	0/0:28,0:28:63.22:0,63,3287	0/0:23,0:23:57.17:0,57,3115	0/0:34,0:34:81.22:0,81,3647	0/0:28,0:28:72.20:0,72,3520	1/1:2,23:26:63.05:1721,63,0	1/1:0,15:15:30.06:975,30,0	0/0:27,0:27:60.18:0,60,3229	0/0:30,0:30:84.27:0,84,4841	0/0:27,0:27:81.28:0,81,4280	0/0:36,0:36:90.31:0,90,5128	0/0:34,0:34:81.28:0,81,3834	1/1:7,9:16:6.02:193,6,0	0/0:21,0:21:48.16:0,48,2588	0/0:25,0:25:66.23:0,66,2848	0/0:35,0:35:96.33:0,96,5173	0/0:33,0:32:75.24:0,75,3427	0/0:31,0:31:84.26:0,84,4466	0/0:24,0:24:63.20:0,63,2918	0/0:31,0:31:72.25:0,72,3722	1/1:3,15:18:24.08:866,24,0	0/1:26,1:27:30.63:31,0,4086	0/0:34,0:34:87.23:0,87,4559	0/0:7,0:7:21.07:0,21,1265
chr10	71942130	.	CACAG	C	304.98	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=8.096;DP=474;FS=7.785;HRun=0;HaplotypeScore=95.4744;InbreedingCoeff=0.3700;MQ=75.23;MQ0=8;MQRankSum=-4.300;QD=3.67;ReadPosRankSum=-0.305;VQSLOD=1.2939;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:26:4.88:5,0,101	0/0:5,0:5:14.95:0,15,118	0/0:25,0:15:10.29:0,10,492	0/0:30,0:24:48.36:0,48,814	0/0:17,0:17:35.81:0,36,451	0/0:20,0:20:48.13:0,48,952	0/0:8,0:8:20.98:0,21,368	0/0:29,0:29:67.27:0,67,1321	0/0:17,0:17:41.64:0,42,755	0/0:23,0:23:55.17:0,55,561	0/0:20,0:19:9:0,9,96	1/1:11,0:11:17.95:103,18,0	0/1:9,0:9:16.40:16,0,40	0/0:14,0:14:32.34:0,32,653	0/0:18,0:18:35.78:0,36,556	0/0:16,0:16:30.02:0,30,533	0/0:21,0:20:21.84:0,22,225	1/1:0,10:10:6.02:118,6,0	0/0:17,0:17:51.05:0,51,739	0/0:23,0:23:39.02:0,39,719	0/0:13,0:11:27.05:0,27,491	0/1:9,0:9:35.48:45,0,35	0/0:10,0:10:10.07:0,10,85	0/1:17,0:17:14.65:155,0,15	0/0:7,0:7:14.99:0,15,126	0/0:20,0:19:47.20:0,47,986	0/0:25,0:24:46.22:0,46,998	0/0:13,0:12:30.05:0,30,545
chr10	71942132	.	CAGAG	C	937.49	PASS	AB=1.000;AC=19;AF=0.352;AN=54;BaseQRankSum=6.239;DP=471;FS=14.720;HRun=0;HaplotypeScore=92.3647;InbreedingCoeff=0.6535;MQ=73.45;MQ0=10;MQRankSum=-3.397;QD=5.93;ReadPosRankSum=-1.972;VQSLOD=0.5092;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,18:25:3.01:48,3,0	0/1:5,0:5:0:0,0,0	0/0:23,0:13:7.95:0,8,225	0/0:30,0:24:38.19:0,38,475	0/0:18,0:18:19.14:0,19,204	0/0:20,0:20:42.06:0,42,598	0/0:8,0:8:14.64:0,15,192	0/0:28,0:28:49.39:0,49,754	0/0:16,0:16:36.10:0,36,557	0/1:22,0:22:16.35:16,0,48	0/0:19,0:18:3:0,3,25	1/1:11,0:11:29.84:308,30,0	1/1:2,7:9:3.01:49,3,0	0/0:16,0:16:28.42:0,28,408	0/1:18,0:18:1.57:2,0,241	0/0:15,0:15:20.07:0,20,286	1/1:22,0:21:4.27:51,4,0	1/1:10,0:10:6.02:74,6,0	0/0:16,0:16:24.08:0,24,377	0/0:22,0:21:8.98:0,9,350	0/0:15,0:13:18.04:0,18,276	1/1:4,5:9:11.95:129,12,0	1/1:5,5:10:2.97:20,3,0	1/1:16,0:16:32.58:413,33,0	./.	0/0:21,0:20:17.25:0,17,592	0/0:26,0:25:24.20:0,24,621	0/0:14,0:12:21.52:0,22,317
chr10	71942134	.	GAGAGAGAGAGAGAGAA	G	1158.11	PASS	AB=1.000;AC=15;AF=0.288;AN=52;BaseQRankSum=1.166;DP=458;FS=14.430;HRun=0;HaplotypeScore=168.2138;InbreedingCoeff=0.5771;MQ=71.97;MQ0=11;MQRankSum=-0.607;QD=9.19;ReadPosRankSum=2.945;VQSLOD=2.0611;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:23:2.98:22,3,0	1/1:5,0:5:11.99:100,12,0	0/0:22,0:12:5.32:0,5,102	0/0:29,0:23:7.80:0,8,180	0/0:16,0:16:7.81:0,8,359	0/0:21,0:21:36.88:0,37,739	0/0:8,0:8:13.83:0,14,191	0/0:26,0:26:42.47:0,42,404	0/0:15,0:15:33.04:0,33,1077	1/1:21,1:22:29.92:448,30,0	./.	0/1:11,0:11:27.35:27,0,275	1/1:9,0:9:2.72:21,3,0	0/0:16,0:16:28.29:0,28,438	0/0:16,0:16:20.92:0,21,429	0/0:15,0:15:19.57:0,20,371	1/1:20,2:21:35.70:478,36,0	0/1:10,0:10:10.37:10,0,138	0/0:15,0:15:24.02:0,24,738	0/0:21,0:20:24.80:0,25,377	0/0:16,0:13:15:0,15,356	0/0:9,0:9:6.02:0,6,151	./.	0/1:17,0:16:95.81:96,0,121	1/1:6,0:6:14.99:127,15,0	0/0:20,0:19:46.89:0,47,1145	0/0:26,0:25:45.95:0,46,686	0/0:14,0:12:21:0,21,542
chr10	71942144	.	GAGAGAA	G	1666.38	PASS	AB=0.913;AC=25;AF=0.481;AN=52;BaseQRankSum=3.750;DP=423;FS=7.946;HRun=0;HaplotypeScore=93.2315;InbreedingCoeff=0.3788;MQ=60.49;MQ0=12;MQRankSum=-1.421;QD=7.57;ReadPosRankSum=0.041;VQSLOD=1.3640;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:10.34:133,10,0	1/1:5,0:5:11.99:100,12,0	0/0:17,0:7:4.90:0,5,102	0/0:22,0:16:8.33:0,8,181	0/0:15,0:15:7.47:0,7,115	0/0:15,7:22:36.33:0,36,288	0/1:7,0:7:20.70:21,0,73	0/0:20,0:20:45.05:0,45,369	0/0:15,0:15:15.06:0,15,443	1/1:18,0:18:37.03:373,37,0	./.	1/1:10,1:11:20.48:173,20,0	1/1:8,0:8:5.20:29,5,0	0/1:12,4:16:16.18:16,0,189	0/1:12,1:13:46.82:47,0,103	0/0:13,0:13:15.08:0,15,137	1/1:17,0:16:35.70:303,36,0	0/1:12,0:12:24.38:24,0,36	0/0:13,0:13:12.27:0,12,216	0/1:16,4:19:35.04:35,0,141	0/1:17,0:14:6.95:7,0,134	1/1:7,0:7:6.02:131,6,0	./.	1/1:17,0:16:26.65:268,27,0	1/1:6,0:6:14.99:127,15,0	0/1:15,4:18:69.10:69,0,286	0/0:26,0:25:26.51:0,27,318	0/0:17,0:14:30.46:0,30,206
chr10	71942150	.	AAGAG	A	677.78	PASS	AB=1.000;AC=29;AF=0.630;AN=46;BaseQRankSum=2.256;DP=410;FS=1.570;HRun=0;HaplotypeScore=85.2920;InbreedingCoeff=0.1956;MQ=57.53;MQ0=10;MQRankSum=-0.204;QD=2.57;ReadPosRankSum=2.286;VQSLOD=1.6944;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:4.27:23,4,0	0/0:4,0:4:2.94:0,3,18	./.	./.	1/1:7,7:14:11.82:101,12,0	0/0:21,0:21:0:0,0,1	0/1:6,0:6:11.07:11,0,19	./.	0/0:14,0:14:12.80:0,13,185	0/1:20,0:20:12.64:13,0,48	./.	0/1:12,0:12:10.94:11,0,22	0/1:9,0:9:5.26:13,0,5	1/1:14,0:15:6.47:53,6,0	1/1:7,4:11:6.01:72,6,0	1/1:7,6:13:3.01:46,3,0	0/1:17,0:16:9.97:45,0,10	0/0:12,0:12:9.43:0,9,83	1/1:12,0:12:3:46,3,0	1/1:16,0:16:5.82:35,6,0	0/0:11,4:12:0:0,0,0	1/1:9,0:9:11.34:94,11,0	./.	1/1:16,0:16:6.63:37,7,0	0/0:8,0:8:5.99:0,6,49	1/1:19,0:18:0.83:75,1,0	1/1:15,10:24:5.92:92,6,0	1/1:14,3:14:2.93:46,3,0
chr10	71942314	.	GA	G	1671.65	PASS	AB=0.627;AC=18;AF=0.321;AN=56;BaseQRankSum=6.329;DP=397;FS=1.495;HRun=12;HaplotypeScore=56.1171;InbreedingCoeff=0.7183;MQ=58.33;MQ0=13;MQRankSum=-0.903;QD=11.61;ReadPosRankSum=2.919;VQSLOD=3.3316;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:64.28:0,64,600	0/0:1,0:1:0:0,0,0	0/0:21,0:6:4.12:0,4,116	0/0:15,2:10:5.98:0,6,106	0/0:17,0:18:23.88:0,24,297	0/0:11,0:12:32.49:0,32,299	0/0:6,0:6:12.50:0,12,122	0/0:27,1:29:36.49:0,36,593	0/0:5,0:5:12.02:0,12,122	1/1:5,13:17:41.33:302,41,0	1/1:5,17:24:51.78:376,52,0	0/1:4,5:9:1.38:77,0,1	1/1:2,4:6:12.84:95,13,0	0/0:9,0:9:17.97:0,18,171	0/0:9,0:9:17.25:0,17,159	0/0:8,0:8:18.04:0,18,182	1/1:9,13:24:39.91:289,40,0	1/1:3,12:16:28.93:215,29,0	0/0:27,0:27:65.94:0,66,638	0/0:13,0:13:39.08:0,39,396	0/0:5,0:5:8.98:0,9,80	0/1:4,7:11:36.97:115,0,37	1/1:2,10:12:24.36:186,24,0	1/1:4,2:5:2.99:23,3,0	1/1:6,11:18:3.18:183,3,0	0/0:17,1:18:6.31:0,6,309	0/0:21,0:20:33.78:0,34,493	0/0:7,0:7:17.97:0,18,170
chr10	71943063	.	C	CA	2670.36	PASS	AB=0.913;AC=11;AF=0.196;AN=56;BaseQRankSum=-3.570;DP=686;FS=1.397;HRun=8;HaplotypeScore=84.9318;InbreedingCoeff=0.9071;MQ=73.34;MQ0=3;MQRankSum=-0.313;QD=21.19;ReadPosRankSum=2.131;VQSLOD=4.0219;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:45:54.65:0,55,197	1/1:2,11:13:30.09:346,30,0	0/0:25,0:21:41.60:0,42,360	0/0:30,0:25:41.34:0,41,338	0/0:31,0:30:78.01:0,78,708	0/0:34,0:34:89.93:0,90,807	0/0:14,0:14:38.99:0,39,349	0/0:21,0:21:51.02:0,51,467	0/0:25,0:25:56.99:0,57,517	1/1:4,16:21:53.97:589,54,0	1/1:3,21:24:54.16:623,54,0	0/0:23,0:23:63.01:0,63,572	0/0:31,0:31:81.03:0,81,737	0/0:26,0:26:69.03:0,69,631	0/0:19,0:19:52.21:0,52,457	0/0:16,0:16:39.01:0,39,357	1/1:2,23:25:55.05:625,55,0	0/0:18,0:19:47.05:0,47,418	0/0:30,0:29:59.85:0,60,537	0/0:38,0:38:99:0,102,931	0/0:25,0:25:57.03:0,57,521	0/0:24,0:24:60.03:0,60,547	0/0:15,0:15:39.02:0,39,357	0/0:30,0:30:78.03:0,78,714	1/1:2,20:22:57.17:658,57,0	0/1:19,2:21:6.21:6,0,455	0/0:27,0:27:63.01:0,63,576	0/0:11,0:11:27:0,27,247
chr10	71945108	.	C	CTTAT	2418.79	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-6.914;DP=524;FS=5.217;HRun=0;HaplotypeScore=82.0101;InbreedingCoeff=0.9870;MQ=73.94;MQ0=0;MQRankSum=-1.386;QD=39.65;ReadPosRankSum=2.131;VQSLOD=3.5697;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.22:0,84,1526	0/0:6,0:6:18.06:0,18,335	0/0:13,0:13:29.57:0,30,528	0/0:12,0:12:24.05:0,24,402	0/0:44,0:44:99:0,129,2307	0/0:20,0:20:57.16:0,57,986	0/0:14,0:14:42.08:0,42,657	0/0:27,0:27:75.15:0,75,1182	0/0:16,0:16:48.13:0,48,812	0/0:23,0:23:66.23:0,66,1217	0/0:29,0:29:84.23:0,84,1424	1/1:0,9:9:21.07:560,21,0	1/1:5,8:14:15.01:340,15,0	0/0:16,0:16:42.13:0,42,747	0/0:11,0:11:33.10:0,33,584	0/0:19,0:19:54.14:0,54,895	0/0:17,0:17:45.14:0,45,807	0/0:21,0:21:60.17:0,60,1036	0/0:20,0:20:60.19:0,60,1043	0/0:29,0:29:81.20:0,81,1350	0/0:13,0:13:39.04:0,39,583	1/1:1,5:7:15.01:340,15,0	1/1:4,16:20:39.09:898,39,0	1/1:0,11:11:18.06:453,18,0	0/0:22,0:22:57.16:0,57,999	0/0:25,0:25:72.22:0,72,1245	0/0:26,0:26:78.23:0,78,1366	0/0:10,0:10:30.04:0,30,454
chr10	71946738	.	A	AT	12058.18	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-16.528;DP=711;FS=0.000;HRun=4;HaplotypeScore=65.2186;InbreedingCoeff=0.9987;MQ=63.33;MQ0=1;MQRankSum=1.161;QD=35.16;ReadPosRankSum=2.883;VQSLOD=5.3047;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,50:54:99:1929,144,0	1/1:0,6:6:18.06:246,18,0	0/0:20,0:16:45.11:0,45,500	0/0:16,0:14:26.10:0,26,278	0/0:24,0:24:69.19:0,69,779	0/0:16,0:16:48.14:0,48,544	0/0:21,0:21:60.17:0,60,680	0/0:30,0:30:81.21:0,81,904	0/0:23,0:23:69.20:0,69,783	1/1:2,33:35:99:1320,99,0	1/1:2,28:30:81.27:1101,81,0	1/1:0,15:15:42.14:574,42,0	1/1:2,22:24:60.20:821,60,0	0/0:26,0:26:75.21:0,75,850	0/0:24,0:24:72.21:0,72,816	0/0:19,0:19:54.15:0,54,612	1/1:4,43:47:99:1687,125,0	1/1:3,32:35:84.28:1149,84,0	0/0:23,0:23:60.15:0,60,670	0/0:21,0:21:63.18:0,63,715	0/0:24,0:24:72.17:0,72,791	1/1:1,24:25:66.11:893,66,0	1/1:3,24:27:54.18:738,54,0	1/1:2,24:26:66.22:903,66,0	1/1:2,17:19:51.17:698,51,0	0/0:35,1:36:52.20:0,52,971	0/0:25,0:25:75.17:0,75,822	0/0:20,0:20:51.14:0,51,577
chr10	71947923	.	T	TCTC	561.52	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=3.177;DP=581;FS=4.237;HRun=0;HaplotypeScore=87.2022;InbreedingCoeff=0.8691;MQ=52.47;MQ0=40;MQRankSum=0.619;QD=5.62;ReadPosRankSum=-2.173;VQSLOD=1.9679;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:59.96:0,60,741	0/0:3,0:3:6.01:0,6,69	0/0:22,0:8:12:0,12,148	0/0:44,0:8:12.04:0,12,171	0/0:14,0:14:30.10:0,30,427	0/0:13,0:13:24.06:0,24,308	0/0:25,0:25:51.98:0,52,767	0/0:30,0:26:30.05:0,30,346	0/0:23,0:22:37.83:0,38,534	0/0:24,0:21:45.13:0,45,575	0/0:12,0:11:18:0,18,215	1/1:9,11:19:6.02:112,6,0	1/1:22,0:23:17.89:254,18,0	0/0:16,0:15:27.08:0,27,366	0/0:26,0:26:48.96:0,49,653	0/0:21,0:21:27.86:0,28,504	0/0:21,0:20:29.94:0,30,347	0/0:9,0:9:11.91:0,12,86	0/0:23,0:20:24.05:0,24,307	0/0:20,0:18:45.11:0,45,601	0/0:32,0:28:51.01:0,51,701	1/1:14,0:13:12:116,12,0	1/1:12,4:13:3.01:35,3,0	1/1:27,0:24:20.91:200,21,0	0/0:10,0:9:16.25:0,16,194	0/0:28,0:24:48.14:0,48,659	0/0:16,0:16:27.08:0,27,354	./.
chr10	71947948	.	CCT	C	217.17	PASS	AB=0.950;AC=10;AF=0.208;AN=48;BaseQRankSum=3.173;DP=604;FS=36.343;HRun=0;HaplotypeScore=97.9201;InbreedingCoeff=0.6356;MQ=45.75;MQ0=27;MQRankSum=0.529;QD=1.89;ReadPosRankSum=1.812;VQSLOD=0.2360;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:2.81:0,3,41	./.	./.	./.	0/0:20,0:20:12.02:0,12,151	0/0:14,0:13:11.52:0,12,125	0/0:30,0:28:9.03:0,9,134	./.	0/0:26,0:25:11.38:0,11,120	0/0:25,0:23:21.48:0,21,232	0/0:11,0:11:5.35:0,5,33	1/1:22,2:23:5.75:65,6,0	1/1:14,2:17:14.44:121,14,0	0/0:19,0:18:14.78:0,15,204	0/1:24,3:27:2.44:2,0,320	0/0:34,0:34:25.76:0,26,280	0/0:18,0:28:13.83:0,14,114	0/0:15,0:12:24.08:0,24,327	0/0:26,0:24:14.67:0,15,145	0/0:29,0:29:5.51:0,6,48	0/0:36,0:35:18.89:0,19,144	0/1:13,0:12:0.03:0,0,0	1/1:7,2:8:5.32:63,5,0	1/1:21,3:18:9.02:98,9,0	0/0:17,0:16:8.29:0,8,93	0/0:29,0:26:32.75:0,33,347	0/0:22,0:26:30.77:0,31,264	0/0:5,0:4:11.02:0,11,77
chr10	71948291	.	GCTAT	G	10971.04	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=15.724;DP=622;FS=3.687;HRun=0;HaplotypeScore=106.9519;InbreedingCoeff=0.9967;MQ=89.29;MQ0=0;MQRankSum=-8.285;QD=45.15;ReadPosRankSum=5.769;VQSLOD=5.4513;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:54.19:1001,54,0	1/1:3,8:11:24.08:430,24,0	0/0:31,0:31:92.91:0,93,2209	0/0:17,0:17:48.09:0,48,1066	0/0:32,0:32:90.29:0,90,2298	0/0:27,0:27:78.27:0,78,2073	0/0:16,0:16:48.16:0,48,1246	0/0:34,0:34:96.31:0,96,2376	0/0:20,0:20:57.20:0,57,1508	1/1:3,15:18:42.14:782,42,0	1/1:0,24:24:60.21:1111,60,0	1/1:0,25:25:66.23:1213,66,0	1/1:0,19:19:51.17:950,51,0	0/0:21,0:21:63.19:0,63,1568	0/0:30,0:30:87.30:0,87,2281	0/0:16,0:16:48.16:0,48,1242	1/1:0,20:20:45.15:820,45,0	1/1:0,19:19:51.17:945,51,0	0/0:20,0:19:60.21:0,60,1597	0/0:28,0:28:78.27:0,78,2074	0/0:24,0:24:69.24:0,69,1818	1/1:0,17:17:36.12:671,36,0	1/1:2,26:28:69.24:1279,69,0	1/1:2,19:21:45.15:819,45,0	1/1:2,19:21:51.17:951,51,0	0/0:23,1:24:13.66:0,14,1631	0/0:25,0:25:75.24:0,75,1942	0/0:14,0:14:42.14:0,42,1119
chr10	71949573	.	AT	A	1742.10	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.288;DP=504;FS=11.738;HRun=9;HaplotypeScore=44.0250;InbreedingCoeff=0.9774;MQ=67.36;MQ0=0;MQRankSum=0.012;QD=19.57;ReadPosRankSum=1.296;VQSLOD=3.0867;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1226	1/1:0,8:8:21.01:192,21,0	0/0:5,0:5:8.76:0,9,81	0/0:6,0:6:15:0,15,142	0/0:35,0:35:93.25:0,93,1054	0/0:26,0:26:69.20:0,69,794	0/0:16,0:16:42.12:0,42,485	0/0:33,0:33:75.21:0,75,857	0/0:7,0:7:18.05:0,18,208	1/1:4,15:19:45:407,45,0	1/1:2,27:29:75.03:686,75,0	0/0:16,0:16:36.11:0,36,416	0/0:14,0:14:42.11:0,42,476	0/0:15,0:15:36.11:0,36,416	0/0:24,0:24:66.19:0,66,753	0/0:12,0:12:30.09:0,30,346	1/1:3,16:19:36.02:329,36,0	0/0:23,0:23:51.13:0,51,576	0/0:15,0:14:36.10:0,36,405	0/0:24,0:24:69.19:0,69,779	0/0:9,0:9:27.08:0,27,312	0/0:11,0:11:24.07:0,24,277	0/0:21,0:21:57.16:0,57,648	0/0:8,0:8:21.02:0,21,227	1/1:0,14:14:33.02:302,33,0	0/0:25,0:25:69.20:0,69,789	0/0:17,0:18:54.16:0,54,617	0/0:14,0:14:36.11:0,36,415
chr10	71952462	.	T	TC	3791.25	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-8.865;DP=680;FS=0.787;HRun=8;HaplotypeScore=63.9339;InbreedingCoeff=0.9275;MQ=67.41;MQ0=0;MQRankSum=-0.970;QD=23.70;ReadPosRankSum=1.996;VQSLOD=4.4350;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:31:63.19:727,63,0	0/0:14,0:14:39:0,39,350	0/0:25,0:21:23.68:0,24,188	0/1:7,0:6:5.59:6,0,38	0/0:32,0:32:86.91:0,87,776	0/0:23,0:23:60:0,60,543	0/0:23,0:23:60.03:0,60,549	0/0:30,0:31:48.03:0,48,469	0/0:22,0:22:60.02:0,60,546	0/0:33,0:33:81.95:0,82,773	0/0:13,0:13:39.02:0,39,357	1/1:3,21:24:54.16:623,54,0	1/1:4,24:28:57.17:658,57,0	0/0:22,0:22:66:0,66,590	0/0:30,0:30:75.01:0,75,680	0/0:32,0:32:89.97:0,90,802	0/0:27,0:27:72.01:0,72,654	1/1:1,13:16:35.77:371,36,0	0/0:21,0:21:44.99:0,45,402	0/0:25,0:25:69.01:0,69,621	0/0:32,0:32:87:0,87,784	1/1:3,14:17:41.85:430,42,0	1/1:2,15:18:45.60:511,46,0	1/1:3,16:19:41.71:466,42,0	0/0:34,0:34:89.99:0,90,805	0/0:34,0:34:92.94:0,93,825	0/0:33,0:33:92.21:0,92,821	0/0:13,0:13:35.97:0,36,318
chr10	71953455	.	CT	C	1367.73	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.942;DP=596;FS=1.289;HRun=5;HaplotypeScore=64.2365;InbreedingCoeff=0.9764;MQ=77.43;MQ0=0;MQRankSum=-4.670;QD=30.39;ReadPosRankSum=1.769;VQSLOD=4.3779;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,45:45:99:1463,129,0	0/0:6,0:6:18.06:0,18,246	0/0:22,0:22:65.90:0,66,806	0/0:21,0:21:50.84:0,51,589	0/0:24,0:24:72.24:0,72,971	0/0:14,0:14:42.14:0,42,572	0/0:23,0:23:60.20:0,60,821	0/0:25,0:25:60.18:0,60,776	0/0:23,0:23:69.21:0,69,926	0/0:22,0:22:60.20:0,60,818	0/0:23,0:23:60.17:0,60,788	0/0:14,0:14:39.13:0,39,533	0/0:21,0:21:63.20:0,63,847	0/0:11,0:11:33.11:0,33,442	0/0:27,0:27:78.24:0,78,1035	0/0:26,0:26:75.25:0,75,1018	0/0:24,0:24:66.20:0,66,878	0/0:25,0:25:72.24:0,72,976	0/0:20,0:20:57.19:0,57,776	0/0:21,0:21:63.21:0,63,862	0/0:21,0:21:60.20:0,60,817	0/0:22,0:22:63.17:0,63,840	0/0:21,0:21:60.19:0,60,806	0/0:29,0:29:84.28:0,84,1146	0/0:13,0:13:39.12:0,39,520	0/0:17,0:17:51.17:0,51,692	0/0:31,0:31:90.28:0,90,1191	0/0:5,0:5:15.05:0,15,202
chr10	71953874	.	A	ATAT	788.61	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.330;DP=462;FS=1.073;HRun=0;HaplotypeScore=64.8797;InbreedingCoeff=0.9597;MQ=79.19;MQ0=0;MQRankSum=-3.287;QD=43.81;ReadPosRankSum=2.710;VQSLOD=5.0302;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.24:0,69,1149	0/0:6,0:6:15.05:0,15,250	0/0:11,0:11:25.62:0,26,339	0/0:17,0:17:32.30:0,32,312	0/0:30,0:30:81.28:0,81,1348	0/0:18,0:18:54.17:0,54,873	0/0:13,0:13:36.12:0,36,595	0/0:35,0:35:99:0,102,1675	0/0:14,0:14:36.11:0,36,574	0/0:31,0:31:93.31:0,93,1526	0/0:16,0:16:48.16:0,48,797	0/0:14,0:14:39.11:0,39,597	0/0:11,0:11:33.11:0,33,549	0/0:9,0:9:27.08:0,27,426	0/0:21,0:21:60.20:0,60,999	0/0:19,0:19:57.17:0,57,899	0/0:18,0:18:54.18:0,54,899	1/1:2,15:18:39.13:883,39,0	0/0:18,0:18:51.17:0,51,849	0/0:21,0:21:63.22:0,63,1047	0/0:8,0:8:24.08:0,24,400	0/0:8,0:8:24.08:0,24,399	0/0:10,0:10:27.09:0,27,449	0/0:8,0:8:24.08:0,24,396	0/0:18,0:18:48.14:0,48,744	0/0:21,0:21:60.19:0,60,953	0/0:20,0:20:60.18:0,60,949	0/0:5,0:5:15.05:0,15,250
chr10	71954808	.	CT	C	4051.72	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.688;DP=692;FS=25.394;HRun=2;HaplotypeScore=83.1913;InbreedingCoeff=0.9997;MQ=71.44;MQ0=0;MQRankSum=-1.188;QD=33.76;ReadPosRankSum=0.562;VQSLOD=1.7413;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1529	1/1:0,9:9:27.09:349,27,0	0/0:17,0:17:43.67:0,44,647	0/0:23,0:23:63.18:0,63,827	0/0:28,0:28:81.27:0,81,1211	0/0:38,0:38:99:0,111,1641	0/0:19,0:19:57.18:0,57,835	0/0:40,0:40:99:0,117,1685	0/0:24,0:24:69.21:0,69,996	1/1:0,31:31:93.27:1175,93,0	1/1:0,22:22:66.09:815,66,0	0/0:23,0:23:69.23:0,69,998	0/0:22,0:22:60.20:0,60,871	0/0:31,0:31:90.29:0,90,1327	0/0:32,0:32:93.32:0,93,1393	0/0:24,0:24:72.23:0,72,1058	1/1:2,30:32:72.23:934,72,0	0/0:14,0:14:39.13:0,39,584	0/0:18,0:18:45.13:0,45,632	0/0:35,0:35:99:0,105,1532	0/0:32,0:32:93.27:0,93,1331	0/0:20,0:20:60.17:0,60,803	0/0:17,0:17:48.11:0,48,645	0/0:21,0:21:63.19:0,63,883	1/1:1,25:26:60.19:779,60,0	0/0:29,0:29:87.29:0,87,1298	0/0:19,0:19:57.19:0,57,854	0/0:11,0:11:33.08:0,33,470
chr10	71956265	.	AT	A	628.97	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.242;DP=572;FS=0.000;HRun=10;HaplotypeScore=61.5938;InbreedingCoeff=0.8894;MQ=64.77;MQ0=0;MQRankSum=-2.356;QD=16.13;ReadPosRankSum=-1.369;VQSLOD=3.5509;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:19:44.97:391,45,0	0/0:6,0:6:15.04:0,15,166	0/0:12,0:12:6.51:0,7,183	0/0:4,0:4:8.72:0,9,95	0/0:33,0:33:87.24:0,87,961	0/0:20,0:20:54.15:0,54,597	0/0:16,0:15:33.03:0,33,336	0/0:32,1:33:52.15:0,52,796	0/0:18,0:18:48.13:0,48,528	0/0:19,0:19:48.13:0,48,531	0/0:19,0:19:57.15:0,57,624	0/0:17,0:17:45.10:0,45,483	0/0:25,0:25:63.14:0,63,683	0/0:14,0:14:39.07:0,39,419	0/0:27,0:27:63.13:0,63,684	0/0:26,1:27:31.09:0,31,565	0/0:38,0:38:99:0,102,1111	1/1:8,12:20:41.93:360,42,0	0/0:24,0:24:54.14:0,54,590	0/0:30,0:30:69.18:0,69,756	0/0:7,0:7:15.04:0,15,166	0/0:20,1:21:13.05:0,13,360	0/0:15,1:16:19.06:0,19,436	0/0:19,0:19:51.60:0,52,557	0/0:20,0:20:60.16:0,60,657	0/0:32,1:33:58.15:0,58,849	0/0:23,0:23:54.13:0,54,585	0/0:12,0:12:15.03:0,15,157
chr10	71956293	.	C	CT	324.95	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.552;DP=524;FS=0.000;HRun=10;HaplotypeScore=58.4806;InbreedingCoeff=0.7952;MQ=63.72;MQ0=3;MQRankSum=-2.723;QD=14.77;ReadPosRankSum=-2.937;VQSLOD=2.9831;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:17:41.44:0,41,323	0/0:7,0:7:17.98:0,18,148	0/0:13,0:12:8.53:0,9,171	0/0:7,0:4:5.96:0,6,49	0/0:29,0:30:70.93:0,71,572	0/0:18,0:17:44.95:0,45,369	0/0:17,0:16:41.87:0,42,334	0/0:22,0:22:50.93:0,51,419	0/0:16,0:16:41.90:0,42,338	0/0:20,1:22:17.98:0,18,343	0/0:21,0:22:49.95:0,50,400	0/0:13,1:15:25.96:0,26,199	0/0:26,0:26:65.84:0,66,532	0/0:11,0:11:17.94:0,18,145	0/0:20,0:20:47.94:0,48,394	0/0:14,0:17:37.89:0,38,299	0/0:40,0:40:98.81:0,99,806	1/1:9,13:22:20.46:417,20,0	0/0:16,0:15:41.91:0,42,340	0/0:28,0:28:68.26:0,68,550	0/0:4,0:4:11.95:0,12,93	0/0:12,0:12:35.96:0,36,295	0/0:23,0:23:22.30:0,22,381	0/0:15,0:16:28.98:0,29,228	0/0:23,0:23:56.92:0,57,468	0/0:31,0:30:83.82:0,84,678	0/0:20,0:22:46.89:0,47,366	0/0:7,0:6:14.98:0,15,123
chr10	71956433	.	C	CT	2171.46	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-2.532;DP=545;FS=1.569;HRun=9;HaplotypeScore=70.9327;InbreedingCoeff=0.9468;MQ=62.94;MQ0=8;MQRankSum=1.934;QD=20.88;ReadPosRankSum=0.729;VQSLOD=4.3613;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:89.88:0,90,780	0/0:10,0:10:29.99:0,30,260	0/0:24,0:8:1.10:0,1,80	0/0:40,0:17:27.05:0,27,203	0/0:12,0:12:29.87:0,30,260	0/0:12,0:12:26.98:0,27,234	0/0:17,0:16:41.97:0,42,361	0/0:29,0:28:65.98:0,66,573	0/0:16,0:16:32.96:0,33,282	0/0:20,0:20:41.51:0,42,357	0/0:16,0:16:23.98:0,24,208	1/1:4,7:11:18.05:198,18,0	1/1:4,10:14:27.03:285,27,0	0/0:12,0:12:17.99:0,18,156	0/0:9,0:9:17.98:0,18,152	0/0:17,0:17:38.99:0,39,339	0/0:37,0:37:77.97:0,78,677	1/1:6,9:14:33.05:352,33,0	0/0:29,0:29:68.92:0,69,592	0/0:19,0:19:44.64:0,45,371	0/0:14,0:14:29.62:0,30,260	1/1:8,6:14:27.03:285,27,0	1/1:5,24:29:43.13:704,43,0	1/1:5,16:21:49.02:534,49,0	0/0:20,0:20:53.99:0,54,469	0/0:19,0:19:47.98:0,48,417	0/0:20,0:20:41.96:0,42,364	0/0:10,0:9:17.99:0,18,156
chr10	71956453	.	C	CT	658.45	PASS	AB=0.932;AC=10;AF=0.185;AN=54;BaseQRankSum=2.381;DP=505;FS=9.323;HRun=12;HaplotypeScore=67.5405;InbreedingCoeff=0.2514;MQ=55.79;MQ0=25;MQRankSum=0.580;QD=4.22;ReadPosRankSum=0.603;VQSLOD=0.6016;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,25:34:44.20:591,44,0	0/0:6,0:6:8.79:0,9,57	./.	0/1:30,0:11:0:0,0,0	0/1:13,1:14:11.59:12,0,85	0/0:15,0:15:4.87:0,5,160	0/0:15,0:14:24.91:0,25,165	0/0:28,0:25:35.66:0,36,262	0/0:16,0:16:23.73:0,24,165	0/1:14,1:15:10.54:11,0,73	0/0:12,0:12:23.78:0,24,173	0/0:10,0:10:9.88:0,10,79	0/0:15,0:15:17.36:0,17,115	0/1:10,2:12:30.91:46,0,31	0/1:9,1:10:17.22:17,0,53	0/0:16,0:16:26.77:0,27,195	0/0:33,0:30:55.66:0,56,400	1/1:19,0:16:20.22:117,20,0	0/0:23,1:23:0.53:0,1,167	0/0:16,0:17:25.85:0,26,179	0/0:16,0:15:14.77:0,15,106	0/0:13,0:11:14.72:0,15,107	0/0:26,0:26:53.14:0,53,375	0/0:24,0:23:19.43:0,19,224	0/0:16,1:17:0.62:0,1,167	0/1:18,1:17:5.39:5,0,125	0/0:17,0:17:20.80:0,21,155	0/0:8,0:3:4.54:0,5,26
chr10	71956517	.	AC	A	2206.79	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=12.261;DP=354;FS=9.284;HRun=2;HaplotypeScore=57.2481;InbreedingCoeff=0.9399;MQ=52.88;MQ0=16;MQRankSum=1.382;QD=28.66;ReadPosRankSum=6.730;VQSLOD=2.0347;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:48.10:0,48,663	0/0:3,0:3:9.03:0,9,135	./.	0/0:6,0:5:8.98:0,9,162	0/0:8,0:8:18.06:0,18,270	0/0:8,0:8:21.03:0,21,287	0/0:17,0:16:48.12:0,48,694	0/0:9,0:7:21.07:0,21,315	0/0:11,0:11:33.11:0,33,494	0/0:14,0:14:39.13:0,39,585	0/0:8,0:8:24.08:0,24,360	1/1:0,9:9:24.08:298,24,0	1/1:1,20:21:57.18:706,57,0	0/0:8,0:8:18.06:0,18,269	0/0:11,0:11:30.10:0,30,449	0/0:12,0:12:30.10:0,30,450	0/0:30,0:25:69.23:0,69,1028	0/0:14,0:12:27.06:0,27,380	0/0:12,0:10:30.10:0,30,443	0/0:12,0:12:33.11:0,33,493	0/0:17,0:16:39.11:0,39,562	1/1:1,15:14:39.12:483,39,0	1/1:1,9:10:18.06:223,18,0	1/1:2,19:20:54.17:669,54,0	0/0:9,0:9:21.07:0,21,315	0/0:22,0:21:54.13:0,54,762	0/0:18,0:17:45.15:0,45,674	0/0:5,0:2:6.02:0,6,90
chr10	71957195	.	G	GAA	3724.07	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.064;DP=594;FS=11.816;HRun=10;HaplotypeScore=80.9719;InbreedingCoeff=0.9924;MQ=61.07;MQ0=0;MQRankSum=-1.679;QD=26.04;ReadPosRankSum=2.068;VQSLOD=2.3642;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:20:37.43:132,37,0	0/0:8,0:8:21.05:0,21,214	0/0:16,0:11:23.87:0,24,219	0/0:16,0:11:14.73:0,15,94	0/0:34,0:35:89.89:0,90,897	0/0:20,0:22:56.57:0,57,542	0/0:20,0:20:52.52:0,53,546	0/0:18,0:19:50.82:0,51,495	0/0:17,0:17:42.08:0,42,427	0/0:21,0:21:47.80:0,48,469	0/0:15,0:16:35.74:0,36,412	1/1:3,15:19:14.63:579,15,0	1/1:8,15:25:50.65:695,51,0	0/0:22,0:25:62.60:0,63,602	0/0:17,0:21:31.99:0,32,325	0/0:23,0:24:56.81:0,57,554	0/0:24,0:24:57.09:0,57,580	1/1:3,16:21:44.12:594,44,0	0/0:18,0:19:44.75:0,45,420	0/0:22,0:22:50.84:0,51,571	0/0:20,0:22:47.70:0,48,593	1/1:8,13:23:44.12:585,44,0	1/1:4,14:20:47.60:638,48,0	1/1:2,12:14:35.61:501,36,0	0/0:19,0:21:38.54:0,39,501	0/0:26,0:26:66.12:0,66,671	0/0:35,0:37:92.57:0,93,886	0/0:15,0:15:38.50:0,38,388
chr10	71957356	.	G	GAA	4340.09	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=0.211;DP=559;FS=1.788;HRun=7;HaplotypeScore=75.9027;InbreedingCoeff=0.9633;MQ=68.36;MQ0=1;MQRankSum=-1.076;QD=32.63;ReadPosRankSum=2.871;VQSLOD=4.9602;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:68.93:0,69,770	0/0:1,0:1:3.01:0,3,35	0/0:16,0:16:33.07:0,33,382	0/0:18,0:18:41.62:0,42,441	0/0:30,0:30:78.22:0,78,909	0/0:14,0:14:42.12:0,42,481	0/0:23,0:23:60.17:0,60,699	0/0:27,0:27:75.22:0,75,874	0/0:14,0:14:42.12:0,42,489	0/0:27,0:27:72.20:0,72,830	0/0:31,0:31:81.22:0,81,942	1/1:3,18:20:52.06:839,52,0	1/1:3,14:17:45.15:738,45,0	0/0:14,0:14:30.07:0,30,349	0/0:12,0:12:27.07:0,27,315	0/0:16,0:16:45.13:0,45,524	0/0:19,0:19:51.11:0,51,579	1/1:4,1:29:66.54:292,67,0	0/0:11,0:11:18.03:0,18,209	0/0:20,0:20:54.16:0,54,629	0/0:13,0:13:36.09:0,36,408	1/1:3,16:20:48.16:767,48,0	1/1:3,13:17:39:552,39,0	1/1:0,29:29:72.20:1152,72,0	0/0:23,0:23:66.20:0,66,769	0/0:25,0:25:69.17:0,69,792	0/0:29,0:29:81.24:0,81,943	0/0:18,0:18:54.16:0,54,629
chr10	71957474	.	GA	G	784.72	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.251;DP=498;FS=15.693;HRun=9;HaplotypeScore=82.9760;InbreedingCoeff=0.9645;MQ=62.29;MQ0=12;MQRankSum=-7.011;QD=15.09;ReadPosRankSum=0.907;VQSLOD=2.3811;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:84.19:0,84,936	0/0:5,0:5:12.04:0,12,138	0/0:28,0:14:14.19:0,14,312	0/0:33,0:12:11.90:0,12,108	0/0:22,0:21:54.14:0,54,604	0/0:10,0:11:32.93:0,33,361	0/0:19,0:19:48.13:0,48,541	0/0:24,0:23:51.14:0,51,580	0/0:13,0:13:30.07:0,30,329	0/0:22,0:22:60.18:0,60,693	0/0:18,1:19:17.42:0,17,418	1/1:1,10:10:21:189,21,0	1/1:2,4:6:14.37:116,14,0	0/0:17,0:17:45.13:0,45,518	0/0:16,0:17:44.95:0,45,490	0/0:17,0:17:39.12:0,39,450	0/0:26,0:26:60.17:0,60,682	0/0:23,0:22:53.51:0,54,586	0/0:9,0:6:12.04:0,12,139	0/0:18,0:19:42.10:0,42,467	0/0:15,0:15:42.11:0,42,475	1/1:3,7:10:21:190,21,0	1/1:4,9:13:26.99:242,27,0	1/1:4,8:12:24:219,24,0	0/0:20,0:20:51.06:0,51,551	0/0:25,0:25:60.16:0,60,676	0/0:17,0:16:39.12:0,39,449	0/0:10,0:10:23.93:0,24,247
chr10	71957488	.	GA	G	2916.69	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=4.572;DP=495;FS=0.390;HRun=10;HaplotypeScore=72.0390;InbreedingCoeff=0.9641;MQ=66.02;MQ0=2;MQRankSum=2.442;QD=18.82;ReadPosRankSum=4.010;VQSLOD=4.3272;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:32:77.97:677,78,0	1/1:1,4:5:9:78,9,0	0/0:26,2:20:8.56:0,9,277	0/0:21,0:11:18.01:0,18,179	0/0:20,0:20:48.13:0,48,531	0/0:14,0:14:39.11:0,39,431	0/0:17,0:17:36.08:0,36,389	0/0:23,1:24:19.04:0,19,416	0/0:14,0:14:39.06:0,39,415	1/1:5,22:27:29.78:488,30,0	1/1:1,17:19:46.81:384,47,0	0/0:1,0:14:36.96:0,37,185	0/0:2,0:9:23.07:0,23,142	0/0:20,0:20:51.14:0,51,564	0/0:15,0:15:39.11:0,39,431	0/0:14,1:15:13.05:0,13,372	1/1:2,24:26:65.97:573,66,0	1/1:6,16:21:24.44:365,24,0	0/0:8,0:8:21.06:0,21,232	0/0:15,0:16:38.93:0,39,405	0/0:19,0:22:59.83:0,60,625	0/0:3,0:9:22.73:0,23,114	0/0:2,0:13:31.42:0,31,175	0/0:5,0:12:23.33:0,23,166	1/1:1,22:23:62.98:547,63,0	0/0:23,2:25:20:0,20,640	0/0:14,0:13:33.08:0,33,358	0/0:8,0:8:15.01:0,15,153
chr10	71957706	.	A	ACCC	6387.48	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.553;DP=641;FS=5.847;HRun=1;HaplotypeScore=133.0688;InbreedingCoeff=0.9998;MQ=76.81;MQ0=0;MQRankSum=-14.414;QD=62.01;ReadPosRankSum=0.891;VQSLOD=4.8117;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.29:0,90,1553	0/0:12,0:12:36.12:0,36,632	0/0:22,0:21:49.94:0,50,885	0/0:18,0:18:48.06:0,48,719	0/0:28,0:28:81.28:0,81,1425	0/0:20,0:20:60.17:0,60,1002	0/0:24,0:24:69.22:0,69,1189	0/0:31,0:31:90.31:0,90,1585	0/0:23,0:23:66.23:0,66,1161	0/0:37,0:37:99:0,111,1939	0/0:23,0:23:69.22:0,69,1189	1/1:1,27:28:81.28:1905,81,0	1/1:4,22:28:78.22:1798,78,0	0/0:36,0:36:99:0,108,1818	0/0:19,0:19:57.18:0,57,977	0/0:31,0:31:90.29:0,90,1557	0/0:14,0:14:39.13:0,39,688	0/0:16,0:16:45.15:0,45,794	0/0:17,0:17:48.15:0,48,819	0/0:19,0:19:57.19:0,57,978	0/0:20,0:20:57.19:0,57,1006	1/1:3,14:18:48.16:1114,48,0	1/1:3,13:16:36.12:849,36,0	1/1:1,12:13:33.11:722,33,0	0/0:23,0:23:69.18:0,69,1130	0/0:41,0:41:99:0,120,2083	0/0:21,0:21:63.20:0,63,1084	0/0:12,0:12:33.11:0,33,582
chr10	71957723	.	TTAA	T	4589.31	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=15.372;DP=632;FS=9.422;HRun=0;HaplotypeScore=139.8332;InbreedingCoeff=0.9950;MQ=69.93;MQ0=0;MQRankSum=-14.703;QD=48.31;ReadPosRankSum=0.173;VQSLOD=6.7297;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.26:0,87,1961	0/0:13,0:13:39.13:0,39,884	0/0:19,0:18:48.03:0,48,792	0/0:11,0:11:21.83:0,22,318	0/0:26,0:26:75.18:0,75,1501	0/0:17,0:17:51.16:0,51,1133	0/0:28,0:28:84.27:0,84,1952	0/0:36,0:36:99:0,108,2366	0/0:27,0:27:80.49:0,80,1891	0/0:32,0:32:96.20:0,96,2066	0/0:26,0:26:78.23:0,78,1738	1/1:0,28:28:84.13:1421,84,0	1/1:2,24:26:75.17:1300,75,0	0/0:31,0:31:93.28:0,93,2154	0/0:21,0:21:63.21:0,63,1480	0/0:33,0:33:99:0,99,2259	0/0:19,0:19:54.17:0,54,1231	0/0:16,0:16:45.11:0,45,485	0/0:20,0:20:60.15:0,60,1221	0/0:17,0:17:51.17:0,51,1169	0/0:17,0:17:51.16:0,51,1158	1/1:2,16:18:53.91:849,54,0	1/1:0,14:14:42.01:689,42,0	1/1:3,6:9:24.40:331,24,0	0/0:24,0:24:72.24:0,72,1666	0/0:41,0:41:99:0,123,2947	0/0:28,0:28:84.29:0,84,1982	0/0:6,0:6:15.03:0,15,318
chr10	71957724	.	TA	T	755.18	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.236;DP=630;FS=2.362;HRun=9;HaplotypeScore=126.8251;InbreedingCoeff=0.9813;MQ=70.01;MQ0=0;MQRankSum=-12.133;QD=6.80;ReadPosRankSum=1.081;VQSLOD=1.2562;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:56.97:0,57,879	0/0:12,0:13:35.93:0,36,387	0/0:20,0:19:26.18:0,26,306	0/0:10,0:10:14.85:0,15,136	0/0:26,0:26:57.16:0,57,648	0/0:15,1:16:20.67:0,21,480	0/0:29,0:29:81.22:0,81,915	0/0:35,0:35:93.24:0,93,1040	0/0:26,0:27:74.27:0,74,886	0/0:30,1:31:53.77:0,54,871	0/0:26,0:26:66.20:0,66,762	1/1:28,0:28:55.32:171,55,0	1/1:26,0:26:51.06:158,51,0	0/0:32,0:32:90.24:0,90,1016	0/0:21,0:21:57.17:0,57,658	0/0:32,0:32:93.21:0,93,1037	0/0:19,0:19:51.10:0,51,571	1/1:1,15:16:42.02:384,42,0	0/0:20,0:20:48.11:0,48,528	0/0:17,0:17:48.13:0,48,540	0/0:17,0:17:44.72:0,45,494	1/1:18,0:18:33.92:111,34,0	1/1:14,0:14:26.92:83,27,0	1/1:9,0:9:11.10:34,11,0	0/0:24,0:24:66.16:0,66,740	0/0:41,1:42:95.89:0,96,1347	0/0:28,0:28:84.18:0,84,933	0/0:5,0:5:12.04:0,12,138
chr10	71957750	.	T	TAC	2368.53	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.032;DP=655;FS=28.865;HRun=0;HaplotypeScore=137.2674;InbreedingCoeff=0.9678;MQ=76.00;MQ0=0;MQRankSum=-13.924;QD=24.42;ReadPosRankSum=2.350;VQSLOD=2.4765;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.27:0,81,1190	0/0:12,0:12:33.09:0,33,462	0/0:23,0:23:57.19:0,57,827	0/0:9,0:9:27.03:0,27,333	0/0:30,0:30:84.24:0,84,1178	0/0:17,0:17:51.16:0,51,731	0/0:26,0:26:78.26:0,78,1140	0/0:37,0:37:99:0,108,1586	0/0:31,0:31:87.29:0,87,1280	0/0:30,0:30:87.29:0,87,1259	0/0:32,0:32:90.29:0,90,1307	1/1:7,23:30:71.63:910,72,0	1/1:7,25:32:83.08:950,83,0	0/0:26,0:26:75.25:0,75,1102	0/0:27,0:27:75.25:0,75,1103	0/0:29,0:29:81.24:0,81,1136	0/0:18,0:18:54.18:0,54,789	0/0:15,0:15:39.13:0,39,574	0/0:21,0:21:60.20:0,60,879	0/0:19,0:19:51.17:0,51,751	0/0:21,0:21:63.21:0,63,928	1/1:5,7:12:17.50:233,17,0	1/1:4,10:14:33.31:358,33,0	1/1:3,6:9:5.40:86,5,0	0/0:24,0:24:69.23:0,69,1016	0/0:43,0:43:99:0,126,1836	0/0:31,0:31:90.30:0,90,1322	0/0:8,0:8:18.06:0,18,265
chr10	71957752	.	CGT	C	1398.17	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.599;DP=653;FS=16.246;HRun=0;HaplotypeScore=135.2974;InbreedingCoeff=0.9637;MQ=77.91;MQ0=0;MQRankSum=-13.955;QD=15.54;ReadPosRankSum=2.157;VQSLOD=2.4472;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.30:0,87,1734	0/0:11,0:11:33.11:0,33,670	0/0:23,0:23:66.20:0,66,1224	0/0:11,0:11:30.10:0,30,594	0/0:31,0:31:90.31:0,90,1772	0/0:18,0:18:54.17:0,54,1049	0/0:26,0:26:78.27:0,78,1550	0/0:37,0:37:99:0,111,2246	0/0:31,0:31:93.30:0,93,1847	0/0:30,0:30:90.31:0,90,1797	0/0:32,0:32:93.32:0,93,1884	1/1:24,2:26:72.22:394,72,0	1/1:26,5:31:74.90:531,75,0	0/0:27,0:27:78.27:0,78,1584	0/0:28,0:28:84.29:0,84,1678	0/0:27,0:27:81.26:0,81,1609	0/0:18,0:18:54.19:0,54,1078	0/0:15,0:15:39.13:0,39,792	0/0:21,0:21:57.20:0,57,1157	0/0:19,0:19:57.20:0,57,1144	0/0:23,0:23:69.24:0,69,1373	1/1:8,3:11:28.08:260,28,0	1/1:11,1:12:32.78:207,33,0	1/1:7,3:10:4.02:175,4,0	0/0:24,0:24:72.25:0,72,1462	0/0:42,0:42:99:0,126,2478	0/0:32,0:32:96.33:0,96,1931	0/0:8,0:8:24.08:0,24,487
chr10	71957754	.	T	TTTC	4236.67	PASS	AB=0.647;AC=9;AF=0.161;AN=56;BaseQRankSum=13.378;DP=666;FS=16.158;HRun=0;HaplotypeScore=142.3508;InbreedingCoeff=0.8703;MQ=78.00;MQ0=0;MQRankSum=-13.336;QD=42.37;ReadPosRankSum=2.046;VQSLOD=5.6994;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.28:0,87,1576	0/0:11,0:11:33.11:0,33,615	0/0:23,0:23:66.19:0,66,1142	0/0:12,0:12:33.08:0,33,556	0/0:32,0:32:93.30:0,93,1689	0/0:17,0:17:51.17:0,51,941	0/0:24,0:24:72.25:0,72,1342	0/0:38,0:38:99:0,114,2065	0/0:31,0:31:93.30:0,93,1701	0/0:30,0:30:87.30:0,87,1606	0/0:32,0:32:93.32:0,93,1719	1/1:5,23:28:78.21:1446,78,0	1/1:7,25:32:69.52:1519,70,0	0/0:27,0:27:81.26:0,81,1477	0/0:30,0:30:87.28:0,87,1572	0/0:26,0:26:78.27:0,78,1447	0/0:17,0:17:51.17:0,51,950	0/0:15,0:15:39.13:0,39,727	0/0:21,0:21:57.20:0,57,1063	0/0:21,0:21:57.20:0,57,1060	0/0:24,0:24:69.24:0,69,1267	1/1:3,8:11:7.28:338,7,0	1/1:8,10:18:26.32:727,26,0	0/1:5,6:11:6.51:206,0,7	0/0:24,0:24:72.25:0,72,1329	0/0:41,0:41:99:0,120,2115	0/0:33,0:33:96.33:0,96,1780	0/0:8,0:8:24.08:0,24,447
chr10	71958260	.	AAC	A	596.97	PASS	AB=1.000;AC=22;AF=0.500;AN=44;BaseQRankSum=4.252;DP=442;FS=18.607;HRun=0;HaplotypeScore=81.6833;InbreedingCoeff=0.2299;MQ=52.88;MQ0=14;MQRankSum=-1.852;QD=2.27;ReadPosRankSum=-0.194;VQSLOD=0.3069;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/1:17,0:18:18.91:19,0,100	0/0:10,0:10:1.55:0,2,4	0/1:20,0:19:11.06:11,0,232	./.	1/1:6,1:6:3.01:32,3,0	0/1:17,0:17:32.11:82,0,32	1/1:13,0:13:5.68:28,6,0	1/1:15,0:15:5.68:27,6,0	1/1:15,0:15:7.50:33,7,0	0/0:10,0:10:3.01:0,3,42	0/0:11,0:11:9.03:0,9,119	0/0:15,0:15:24.07:0,24,320	1/1:26,2:28:27.86:258,28,0	0/0:18,0:18:18.84:0,19,155	0/0:10,0:9:5.98:0,6,64	0/0:17,0:16:12:0,12,136	0/1:30,0:30:40.02:40,0,230	1/1:19,0:19:14.20:70,14,0	1/1:19,0:19:14.20:70,14,0	0/1:28,0:26:27.87:28,0,38	1/1:12,6:17:3.01:33,3,0	0/1:13,0:13:19.11:19,0,64	0/0:15,0:15:6.02:0,6,84	./.
chr10	71958295	.	ACACACACACACG	A	1332.12	PASS	AB=0.967;AC=9;AF=0.161;AN=56;BaseQRankSum=7.873;DP=431;FS=30.654;HRun=0;HaplotypeScore=150.3970;InbreedingCoeff=0.3218;MQ=48.99;MQ0=23;MQRankSum=-7.313;QD=10.57;ReadPosRankSum=1.862;VQSLOD=1.3128;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:8:14.98:0,15,132	0/0:7,0:7:15.04:0,15,485	0/0:21,0:9:26.88:0,27,255	0/1:22,0:8:4.35:4,0,62	0/0:15,0:14:20.52:0,21,965	0/0:11,0:11:25.56:0,26,592	0/0:25,0:23:45.03:0,45,1664	0/0:9,0:9:20.08:0,20,337	0/0:9,0:7:17.93:0,18,399	0/0:21,0:21:53.46:0,53,1221	0/0:12,0:11:27.05:0,27,480	1/1:13,0:12:11.92:165,12,0	0/1:10,1:11:10.75:301,0,11	0/0:5,0:5:11.99:0,12,370	0/0:10,0:10:18.51:0,19,633	0/0:20,0:19:48.08:0,48,1875	0/0:26,0:25:68.69:0,69,2112	0/1:16,0:16:40.82:41,0,972	0/0:7,0:6:16.83:0,17,539	0/0:13,0:11:27.04:0,27,972	0/0:45,0:43:99:0,100,3051	1/1:13,2:15:15.05:416,15,0	0/1:21,2:23:13.92:382,0,14	0/1:26,0:25:99:168,0,391	0/0:12,0:10:15.03:0,15,418	0/0:11,0:11:29.86:0,30,907	0/0:11,0:11:29.82:0,30,878	0/0:4,0:2:3.01:0,3,43
chr10	71958297	.	ACACACACACG	A	1856.04	PASS	AB=0.929;AC=11;AF=0.196;AN=56;BaseQRankSum=8.657;DP=411;FS=27.755;HRun=0;HaplotypeScore=131.1297;InbreedingCoeff=0.6195;MQ=51.02;MQ0=21;MQRankSum=-6.598;QD=17.19;ReadPosRankSum=1.370;VQSLOD=1.2813;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:9:12:0,12,108	0/0:6,0:6:15.04:0,15,391	0/0:23,0:11:19.22:0,19,233	0/1:21,0:9:5.66:6,0,61	0/0:14,0:13:20.39:0,20,782	0/0:10,0:10:22.21:0,22,462	0/0:25,0:23:45.03:0,45,1423	0/0:9,0:9:18.76:0,19,239	0/0:9,0:7:17.93:0,18,320	0/0:19,0:19:50.46:0,50,960	0/0:11,0:10:24.04:0,24,330	1/1:8,2:9:11.92:241,12,0	1/1:7,2:9:26.75:391,27,0	0/0:5,0:5:11.99:0,12,318	0/0:9,0:9:18.51:0,19,525	0/0:20,0:19:48.08:0,48,1570	0/0:27,0:26:71.13:0,71,1631	0/1:16,0:16:40.83:41,0,769	0/0:7,0:6:16.55:0,17,412	0/0:13,0:11:27:0,27,786	0/0:43,0:41:93.30:0,93,2412	1/1:8,4:12:15.05:472,15,0	1/1:13,5:18:23.98:583,24,0	0/1:16,6:21:99:288,0,314	0/0:14,0:12:18.03:0,18,366	0/0:11,0:11:29.86:0,30,752	0/0:12,0:12:32.73:0,33,724	0/0:4,0:2:2.22:0,2,7
chr10	71958306	.	C	CG	230.57	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=0.416;DP=470;FS=2.375;HRun=9;HaplotypeScore=114.9673;InbreedingCoeff=0.5711;MQ=64.34;MQ0=18;MQRankSum=1.011;QD=3.98;ReadPosRankSum=-4.381;VQSLOD=-0.1972;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:6,18:21:21.08:196,21,0	0/0:4,0:4:2.94:0,3,19	0/0:33,0:21:31.34:0,31,286	0/0:33,0:19:7.77:0,8,193	0/0:15,0:14:11.98:0,12,104	0/0:8,0:8:18:0,18,156	0/0:26,0:24:29.94:0,30,260	1/1:15,0:15:11.10:146,11,0	0/0:13,0:12:19.70:0,20,149	0/0:19,0:19:29.01:0,29,240	0/1:14,0:14:4.27:4,0,134	0/0:9,0:8:10.98:0,11,69	0/0:9,0:9:25.78:0,26,185	0/0:9,0:9:11.96:0,12,104	0/0:15,0:15:8.66:0,9,77	0/0:24,0:23:29.93:0,30,260	0/0:26,0:27:34.40:0,34,276	0/0:12,0:12:14.83:0,15,126	0/0:9,0:8:5.99:0,6,52	0/0:15,0:13:8.96:0,9,78	0/0:36,0:34:56.96:0,57,494	0/0:12,0:12:11.23:0,11,38	0/0:18,0:18:18.47:0,18,95	0/0:21,0:20:6.91:0,7,26	0/0:16,0:15:11.93:0,12,99	0/0:13,0:13:14.95:0,15,128	0/0:12,0:13:13.18:0,13,107	0/1:5,0:3:0:0,0,0
chr10	71958328	.	TGGGAGGGAGAGGGAAAGAGAGAGGGA	T	2911.15	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.030;DP=460;FS=0.000;HRun=0;HaplotypeScore=280.4463;InbreedingCoeff=0.9133;MQ=74.52;MQ0=1;MQRankSum=-7.178;QD=33.08;ReadPosRankSum=-0.206;VQSLOD=1.7123;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:33.11:0,33,2822	0/0:5,0:5:15.05:0,15,1120	0/0:34,0:28:43.61:0,44,1275	0/0:34,0:24:32.91:0,33,1403	0/0:13,0:13:33.11:0,33,3054	0/0:8,0:8:24.08:0,24,2803	0/0:20,0:20:57.20:0,57,5626	0/0:17,0:17:33.11:0,33,2424	0/0:16,0:16:48.16:0,48,4628	0/0:19,0:19:51.18:0,51,5054	0/0:15,0:15:45.15:0,45,4240	1/1:3,8:11:9.50:504,10,0	1/1:4,9:13:15.52:1030,16,0	0/0:8,0:8:18.06:0,18,2113	0/0:12,0:12:30.10:0,30,3257	0/0:18,0:18:45.15:0,45,4354	0/0:23,0:23:60.21:0,60,5689	1/1:4,6:10:3:206,3,0	0/0:8,0:8:24.08:0,24,2300	0/0:11,0:11:30.10:0,30,3203	0/0:31,0:30:67.11:0,67,6842	1/1:5,9:14:15.05:487,15,0	1/1:7,14:21:20.61:612,21,0	1/1:12,7:18:5.74:242,6,0	0/0:19,0:19:48.16:0,48,5208	0/0:13,0:13:33.11:0,33,3388	0/0:18,0:18:54.17:0,54,5895	0/0:6,0:6:18.06:0,18,2057
chr10	71958688	.	A	AAAAC	769.74	PASS	AB=0.944;AC=8;AF=0.143;AN=56;BaseQRankSum=4.664;DP=643;FS=6.567;HRun=0;HaplotypeScore=126.7201;InbreedingCoeff=0.0996;MQ=62.57;MQ0=13;MQRankSum=-1.181;QD=4.45;ReadPosRankSum=0.823;VQSLOD=1.9535;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,15:36:42.40:42,0,165	0/0:2,0:2:5.93:0,6,40	0/0:64,0:19:36.61:0,37,309	0/0:33,0:12:19.67:0,20,126	0/0:18,0:18:27.75:0,28,216	0/0:27,0:26:57.38:0,57,472	0/0:13,0:13:29.88:0,30,268	0/0:37,0:37:86.52:0,87,731	0/0:20,0:20:38.85:0,39,330	0/0:22,0:22:42.35:0,42,247	0/0:12,0:12:10.64:0,11,141	0/1:28,0:28:27.66:28,0,164	0/1:18,0:18:25.04:25,0,94	0/0:17,0:17:28.15:0,28,242	0/0:19,0:19:42.12:0,42,401	0/0:23,0:22:60.37:0,60,565	0/0:26,0:26:51.01:0,51,310	1/1:13,0:18:42.61:624,43,0	0/0:22,0:20:49.40:0,49,416	0/0:16,0:15:30.89:0,31,303	0/0:9,0:9:16.66:0,17,117	0/1:27,0:27:23.22:23,0,196	0/1:22,0:22:79.89:80,0,140	0/1:24,0:24:89.34:89,0,99	0/0:25,0:25:68.06:0,68,450	0/0:23,0:23:53.56:0,54,439	0/0:31,0:31:59.78:0,60,544	0/0:11,0:10:6.95:0,7,142
chr10	71958972	.	GA	G	4839.75	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=16.068;DP=664;FS=0.000;HRun=1;HaplotypeScore=94.8709;InbreedingCoeff=0.9977;MQ=90.87;MQ0=0;MQRankSum=-5.549;QD=33.61;ReadPosRankSum=4.997;VQSLOD=4.4553;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,1993	0/0:8,0:8:24.05:0,24,332	0/0:37,0:37:82.91:0,83,1438	0/0:29,0:28:78.23:0,78,1133	0/0:18,0:18:51.14:0,51,734	0/0:23,0:23:69.16:0,69,987	0/0:28,0:28:84.21:0,84,1185	0/0:29,0:29:87.21:0,87,1230	0/0:20,0:20:60.17:0,60,874	0/0:24,0:24:72.23:0,72,1076	0/0:18,0:18:54.18:0,54,807	1/1:0,33:33:90.30:1254,90,0	1/1:0,20:20:45.15:623,45,0	0/0:23,0:23:69.20:0,69,1012	0/0:17,0:17:51.15:0,51,738	0/0:14,0:14:42.13:0,42,623	0/0:26,0:26:75.23:0,75,1101	1/1:0,20:20:45.12:628,45,0	0/0:21,0:21:60.18:0,60,848	0/0:23,0:23:66.19:0,66,957	0/0:37,0:37:99:0,102,1448	1/1:0,23:23:69.23:960,69,0	1/1:0,26:26:60.18:817,60,0	1/1:1,21:22:20.18:558,20,0	0/0:22,0:22:66.14:0,66,957	0/0:27,0:27:81.27:0,81,1214	0/0:24,0:23:72.23:0,72,1080	0/0:7,0:7:21.05:0,21,299
chr10	71960519	.	G	GTTTTT	5408.82	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=7.571;DP=729;FS=1.919;HRun=9;HaplotypeScore=141.7386;InbreedingCoeff=0.9392;MQ=67.72;MQ0=1;MQRankSum=-0.711;QD=19.81;ReadPosRankSum=-0.565;VQSLOD=1.5105;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:42:2.81:0,3,141	1/1:1,0:14:27.74:160,28,0	0/0:40,0:27:26.48:0,26,612	0/0:26,0:15:7.50:0,8,256	0/0:36,0:36:85.75:0,86,1317	0/0:22,0:22:54.05:0,54,805	0/0:16,0:16:3.43:0,3,521	0/0:37,0:36:50.51:0,51,1147	0/0:30,0:30:84.18:0,84,1346	1/1:6,0:22:47.33:273,47,0	1/1:6,0:23:40.75:185,41,0	1/1:3,1:25:21.07:473,21,0	1/1:5,14:23:28.91:703,29,0	0/0:18,0:18:41.38:0,41,662	0/0:24,0:24:69.19:0,69,1067	0/0:18,0:18:54.17:0,54,869	1/1:3,0:29:51.17:219,51,0	1/1:3,0:24:41.60:194,42,0	0/0:25,0:25:65.54:0,66,845	0/0:32,0:33:66.39:0,66,1551	0/0:17,0:17:45.10:0,45,704	1/1:1,21:24:62.91:1166,63,0	1/1:2,26:30:42.87:989,43,0	1/1:2,26:31:30.10:836,30,0	1/1:4,0:28:46.02:213,46,0	0/0:30,0:30:68.49:0,68,1096	0/0:23,0:23:38.84:0,39,955	0/0:18,0:18:51.16:0,51,845
chr10	71962517	.	ACC	A	2636.39	PASS	AB=0.939;AC=11;AF=0.196;AN=56;BaseQRankSum=9.516;DP=783;FS=6.707;HRun=2;HaplotypeScore=150.2967;InbreedingCoeff=0.8846;MQ=58.54;MQ0=14;MQRankSum=2.198;QD=17.93;ReadPosRankSum=1.543;VQSLOD=1.2354;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:47.64:0,48,417	1/1:0,11:11:15.05:232,15,0	0/0:32,0:18:39.90:0,40,416	0/0:37,0:23:65.94:0,66,638	0/0:28,0:27:69.04:0,69,893	0/0:26,0:26:45.57:0,46,848	0/0:24,0:24:46.54:0,47,833	0/0:23,0:24:66.85:0,67,614	0/0:47,0:47:99:0,103,1886	1/1:0,17:17:50.98:525,51,0	1/1:1,27:31:39.39:598,39,0	0/0:31,0:31:79.49:0,79,897	0/0:23,0:23:32.49:0,32,397	0/0:24,0:24:57:0,57,985	0/0:41,0:39:99:0,114,1667	0/0:26,0:25:52.04:0,52,1011	1/1:3,18:23:38.54:532,39,0	0/0:22,0:22:58.93:0,59,344	0/0:14,0:14:38.73:0,39,404	0/0:17,0:17:51.04:0,51,642	0/0:58,0:58:99:0,130,1835	0/0:22,0:22:41.71:0,42,402	0/0:23,0:23:59.65:0,60,613	0/0:34,0:34:92.64:0,93,1007	1/1:1,29:33:62.19:910,62,0	0/1:29,2:31:17.90:18,0,1048	0/0:33,0:32:45.24:0,45,1161	0/0:16,0:15:29.30:0,29,492
chr10	71962518	.	C	CCACACA	2844.03	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=1.343;DP=810;FS=10.067;HRun=0;HaplotypeScore=219.6857;InbreedingCoeff=0.9074;MQ=58.24;MQ0=15;MQRankSum=-2.774;QD=14.81;ReadPosRankSum=-2.413;VQSLOD=1.4183;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,1:37:18.06:300,18,0	0/0:11,0:11:11.70:0,12,167	./.	./.	0/0:24,0:27:30.77:0,31,594	0/0:25,0:26:30.10:0,30,590	0/0:21,0:23:30.10:0,30,570	0/0:23,0:23:6.99:0,7,105	0/0:42,0:47:90.31:0,90,1760	0/0:18,0:16:15.05:0,15,204	0/0:31,0:31:36.12:0,36,508	1/1:12,12:37:46.45:1203,46,0	1/1:16,8:29:21.03:504,21,0	0/0:22,0:25:2.55:0,3,793	0/0:42,0:41:69.69:0,70,1329	0/0:24,0:25:48.16:0,48,941	0/0:24,0:24:31.19:0,31,426	0/0:12,0:23:15.95:0,16,401	0/0:12,0:13:9.02:0,9,131	0/0:15,0:16:21.96:0,22,428	0/0:58,0:60:53.27:0,53,1023	1/1:11,11:27:17.10:460,17,0	1/1:19,0:27:11.11:134,11,0	1/1:19,0:33:32.25:421,32,0	0/0:33,0:33:57.18:0,57,791	0/0:29,0:31:42.09:0,42,694	0/0:26,0:32:58.84:0,59,1106	0/0:16,0:15:21.06:0,21,373
chr10	71964350	.	G	GGAA	624.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.431;DP=905;FS=5.031;HRun=0;HaplotypeScore=162.9605;InbreedingCoeff=0.9997;MQ=66.32;MQ0=1;MQRankSum=-1.337;QD=23.14;ReadPosRankSum=-0.893;VQSLOD=3.3242;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,1971	0/0:16,0:16:42.11:0,42,624	0/0:32,0:25:56.24:0,56,727	0/0:25,0:24:46.19:0,46,725	0/0:27,0:27:72.14:0,72,990	0/0:31,0:31:87.17:0,87,1249	0/0:35,0:35:96.17:0,96,1345	0/0:29,0:29:69.98:0,70,754	0/0:31,0:31:90.21:0,90,1278	0/0:39,0:39:99:0,114,1574	0/0:19,0:18:51.12:0,51,743	0/0:45,0:45:99:0,123,1726	0/0:30,0:30:84.09:0,84,1097	0/0:35,0:35:99:0,99,1441	0/0:44,0:44:99:0,126,1748	0/0:46,0:46:99:0,126,1745	0/0:30,0:30:84.15:0,84,1197	1/1:5,22:27:37.45:720,37,0	0/0:22,0:21:57.07:0,57,687	0/0:22,0:22:53.75:0,54,782	0/0:60,0:60:99:0,171,2486	0/0:23,0:23:54.11:0,54,727	0/0:23,0:23:37.22:0,37,777	0/0:47,0:47:99:0,135,2074	0/0:16,0:16:45.07:0,45,646	0/0:40,0:40:99:0,107,1557	0/0:39,0:39:99:0,108,1532	0/0:23,0:23:69.14:0,69,963
chr10	71965552	.	CCTCT	C	922	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=3.371;DP=697;FS=9.207;HRun=0;HaplotypeScore=123.1487;InbreedingCoeff=0.7058;MQ=74.24;MQ0=12;MQRankSum=1.427;QD=7.75;ReadPosRankSum=1.459;VQSLOD=1.5020;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:47:11.73:0,12,193	1/1:12,0:12:9.03:146,9,0	0/0:66,0:30:9.20:0,9,294	0/0:81,0:34:15.27:0,15,189	0/0:12,0:12:20.74:0,21,443	0/0:28,0:28:50.88:0,51,1060	0/0:24,0:24:29.57:0,30,605	0/0:35,0:35:34.36:0,34,762	0/0:16,0:16:30.07:0,30,627	1/1:7,13:20:34.82:529,35,0	1/1:5,5:11:3.01:49,3,0	0/0:22,0:22:20.81:0,21,334	0/0:18,0:15:11.67:0,12,127	0/0:22,0:22:39.13:0,39,894	0/0:19,0:23:38.87:0,39,844	0/0:21,0:22:34.35:0,34,841	1/1:10,10:20:15.05:243,15,0	0/0:12,0:16:12.04:0,12,262	0/1:19,0:19:14.19:14,0,539	0/0:11,0:12:14.79:0,15,301	0/0:42,0:42:28.14:0,28,1322	0/0:25,0:24:5.99:0,6,90	0/0:12,0:12:0:0,0,0	0/1:18,0:17:0:0,0,0	1/1:10,7:18:6.02:97,6,0	0/0:16,0:20:33.87:0,34,610	0/0:23,0:22:44.62:0,45,965	0/0:10,0:9:15.03:0,15,218
chr10	71968136	.	TAA	T	823.48	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.858;DP=876;FS=1.844;HRun=3;HaplotypeScore=109.5842;InbreedingCoeff=0.9990;MQ=75.71;MQ0=0;MQRankSum=-0.723;QD=39.21;ReadPosRankSum=-0.213;VQSLOD=3.0281;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,2743	0/0:18,0:18:51.17:0,51,978	0/0:28,0:28:84.28:0,84,1570	0/0:22,0:22:66.19:0,66,1118	0/0:22,0:22:66.23:0,66,1273	0/0:32,0:32:90.31:0,90,1738	0/0:25,0:25:75.25:0,75,1418	0/0:36,0:35:99:0,99,1909	0/0:45,0:45:99:0,135,2608	0/0:34,0:34:99:0,102,1968	0/0:21,0:21:63.22:0,63,1212	0/0:39,0:39:99:0,117,2226	0/0:31,0:31:93.32:0,93,1775	0/0:36,0:36:99:0,108,2070	0/0:47,0:47:99:0,135,2570	0/0:40,0:40:99:0,108,1986	0/0:39,0:39:99:0,117,2226	1/1:0,21:21:60.20:918,60,0	0/0:22,0:22:66.22:0,66,1244	0/0:23,0:23:69.23:0,69,1301	0/0:59,0:59:99:0,178,3387	0/0:29,0:29:87.28:0,87,1613	0/0:26,0:26:78.25:0,78,1442	0/0:35,0:35:99:0,105,2029	0/0:23,0:23:69.24:0,69,1329	0/0:30,0:29:90.31:0,90,1733	0/0:32,0:32:87.29:0,87,1631	0/0:11,0:11:27.09:0,27,522
chr10	71968524	.	C	CTGTCTG	701.91	PASS	AB=0.676;AC=13;AF=0.232;AN=56;BaseQRankSum=3.037;DP=742;FS=0.000;HRun=0;HaplotypeScore=164.4212;InbreedingCoeff=0.7665;MQ=61.86;MQ0=9;MQRankSum=-0.843;QD=3.81;ReadPosRankSum=-2.524;VQSLOD=2.0350;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,25:39:2.96:19,3,0	0/0:10,0:10:24.08:0,24,474	0/0:45,0:29:33.03:0,33,392	0/0:62,0:45:49.97:0,50,669	0/0:19,0:19:39.12:0,39,695	0/0:19,0:19:36.12:0,36,660	0/0:39,0:39:78.25:0,78,1341	0/0:26,0:25:27.09:0,27,412	0/0:17,0:17:30.09:0,30,577	0/0:26,0:26:45.56:0,46,917	0/0:15,0:15:21.06:0,21,350	1/1:11,20:29:10.99:190,11,0	0/1:13,11:25:10.13:191,0,10	0/0:19,0:19:39.13:0,39,795	0/0:27,0:27:63.20:0,63,1174	0/0:26,0:26:66.20:0,66,1221	0/0:29,0:29:69.22:0,69,1363	1/1:1,0:19:9.03:196,9,0	0/0:24,0:22:30.10:0,30,577	0/0:16,0:16:27.09:0,27,498	0/0:58,0:57:99:0,108,1950	1/1:8,13:22:6.02:76,6,0	1/1:11,0:11:9:91,9,0	1/1:6,26:35:3.01:99,3,0	0/0:29,0:29:57.63:0,58,1031	0/0:22,0:22:42.10:0,42,686	0/0:23,0:23:33.04:0,33,592	0/0:5,0:5:8.98:0,9,125
chr10	71968560	.	CTG	C	399.95	PASS	AB=0.935;AC=17;AF=0.354;AN=48;BaseQRankSum=3.446;DP=736;FS=0.000;HRun=0;HaplotypeScore=103.6756;InbreedingCoeff=-0.0989;MQ=52.23;MQ0=29;MQRankSum=1.488;QD=1.09;ReadPosRankSum=3.283;VQSLOD=1.6814;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,1:28:6.02:64,6,0	0/0:14,0:14:10.77:0,11,80	./.	./.	0/1:15,0:15:3.20:9,0,3	0/1:19,1:19:23.05:23,0,51	0/1:33,2:35:17.73:18,0,105	0/0:43,0:38:2.80:0,3,13	0/0:18,0:17:17.88:0,18,172	0/0:27,0:27:8.81:0,9,83	0/0:11,0:13:2.99:0,3,24	0/1:29,0:30:14.17:27,0,14	0/1:17,0:17:16.56:17,0,72	0/0:24,0:23:9.03:0,9,117	0/1:32,4:36:33.92:34,0,292	0/0:31,0:31:11.96:0,12,110	0/0:32,0:40:23.91:0,24,191	./.	0/1:23,3:22:51.96:52,0,52	0/1:15,0:14:27.50:28,0,36	0/1:50,2:50:17:17,0,102	0/1:16,2:18:12.06:66,0,12	1/1:8,1:4:3.01:32,3,0	1/1:34,1:37:17.70:148,18,0	0/0:27,0:26:2.72:0,3,82	0/0:23,0:23:14.82:0,15,128	0/1:21,1:22:14.04:14,0,170	./.
chr10	71969104	.	CAT	C	4201.38	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.046;DP=764;FS=6.589;HRun=0;HaplotypeScore=105.2721;InbreedingCoeff=1.0000;MQ=60.96;MQ0=2;MQRankSum=2.087;QD=39.27;ReadPosRankSum=5.229;VQSLOD=5.5846;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,2652	1/1:0,16:16:42.14:643,42,0	0/0:19,0:17:51.11:0,51,937	0/0:23,0:17:47.30:0,47,784	0/0:19,0:19:57.18:0,57,1053	0/0:25,0:25:75.24:0,75,1405	0/0:31,0:31:90.28:0,90,1642	0/0:28,0:28:78.27:0,78,1492	0/0:23,0:23:69.20:0,69,1246	1/1:1,18:19:54.16:804,54,0	1/1:0,18:18:42.14:642,42,0	0/0:29,0:29:87.30:0,87,1654	0/0:27,0:27:78.27:0,78,1486	0/0:29,0:29:84.23:0,84,1563	0/0:35,0:35:99:0,102,1878	0/0:27,0:27:81.26:0,81,1511	1/1:0,22:21:51.17:781,51,0	0/0:25,0:25:72.22:0,72,1338	0/0:29,0:27:78.25:0,78,1459	0/0:22,0:22:63.20:0,63,1184	0/0:56,0:56:99:0,162,2946	0/0:25,0:25:75.19:0,75,1394	0/0:27,0:27:81.24:0,81,1465	0/0:36,0:36:99:0,108,2029	1/1:0,32:32:87.30:1332,87,0	0/0:33,0:33:99:0,99,1808	0/0:28,0:28:81.23:0,81,1442	0/0:12,0:12:36.12:0,36,678
chr10	71972296	.	A	AAAAT	1481.84	PASS	AB=1.000;AC=21;AF=0.583;AN=36;BaseQRankSum=-3.133;DP=301;FS=2.416;HRun=0;HaplotypeScore=50.0330;InbreedingCoeff=0.5354;MQ=83.80;MQ0=1;MQRankSum=-2.111;QD=10.90;ReadPosRankSum=-2.300;VQSLOD=2.2436;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:9.03:0,9,137	./.	./.	./.	0/0:11,0:11:12.03:0,12,160	1/1:2,8:11:21.07:487,21,0	1/1:5,1:6:3.01:70,3,0	1/1:30,0:30:2.49:6,2,0	1/1:7,3:10:12.04:277,12,0	./.	./.	1/1:7,0:8:3.01:52,3,0	1/1:4,0:4:3:29,3,0	./.	./.	./.	1/1:13,9:22:18.06:418,18,0	1/1:13,0:13:9.03:149,9,0	0/0:11,0:11:12.04:0,12,183	0/0:8,0:8:6.02:0,6,91	0/0:9,0:9:3.01:0,3,46	./.	1/1:4,0:5:3.01:52,3,0	./.	1/1:12,2:14:3.01:70,3,0	0/1:13,0:13:9.86:10,0,166	0/0:14,0:14:6.02:0,6,91	0/0:16,0:16:9:0,9,113
chr10	71973296	.	GCA	G	2742.79	PASS	AC=40;AF=0.769;AN=52;BaseQRankSum=2.123;DP=660;FS=3.242;HRun=0;HaplotypeScore=105.1342;InbreedingCoeff=0.7272;MQ=55.19;MQ0=39;MQRankSum=0.529;QD=6.58;ReadPosRankSum=0.893;VQSLOD=3.0283;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:39:24.04:108,24,0	0/0:9,0:9:12.03:0,12,159	./.	0/0:74,0:13:0:0,0,0	1/1:13,1:15:11.82:99,12,0	1/1:9,16:27:3.70:249,4,0	1/1:15,5:23:38.11:305,38,0	./.	1/1:12,4:16:14.07:137,14,0	0/0:15,0:16:18:0,18,203	0/0:3,0:7:3:0,3,26	1/1:11,0:23:20.36:99,20,0	1/1:8,0:19:23.67:115,24,0	1/1:8,11:19:23.09:235,23,0	1/1:8,9:19:24.20:224,24,0	1/1:10,12:24:26.46:238,26,0	0/0:19,0:32:57.02:0,57,582	1/1:7,0:10:2.84:14,3,0	1/1:12,0:13:5.85:47,6,0	1/1:7,15:23:23.85:242,24,0	1/1:21,7:27:12.03:130,12,0	1/1:8,0:11:5.78:32,6,0	1/1:9,0:22:2.84:14,3,0	1/1:10,0:24:5.68:28,6,0	0/0:12,1:28:33.03:0,33,351	1/1:12,6:19:23.86:223,24,0	1/1:14,11:26:26.40:255,26,0	1/1:5,4:11:11.87:112,12,0
chr10	71974567	.	GA	G	588.86	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.156;DP=539;FS=8.154;HRun=11;HaplotypeScore=64.1655;InbreedingCoeff=0.7313;MQ=55.58;MQ0=3;MQRankSum=-1.018;QD=9.50;ReadPosRankSum=2.645;VQSLOD=2.2645;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,40:51:31.80:673,32,0	0/0:11,0:10:6.87:0,7,177	0/0:11,0:4:10.27:0,10,95	0/0:8,0:2:2.90:0,3,17	0/0:19,0:19:38.76:0,39,387	0/0:16,0:16:36.09:0,36,383	0/0:22,0:23:25.07:0,25,389	0/0:40,0:41:68.71:0,69,857	0/0:10,0:10:21.04:0,21,214	0/0:12,1:12:5.42:0,5,255	0/0:13,0:14:6.02:0,6,207	0/0:20,0:20:48.11:0,48,500	0/0:17,0:17:33.08:0,33,350	0/0:27,0:27:56.73:0,57,582	0/0:12,0:10:30.07:0,30,317	0/0:17,0:17:42.10:0,42,445	0/0:33,1:34:68.59:0,69,931	1/1:1,0:10:10.18:29,10,0	0/0:16,0:15:31.01:0,31,335	0/0:24,0:24:48.51:0,49,493	0/0:16,0:15:30.53:0,31,239	0/0:12,0:12:26.85:0,27,265	0/0:14,1:15:8.42:0,8,281	0/0:25,0:25:60.05:0,60,605	0/0:20,0:20:38.65:0,39,440	0/0:23,0:23:41.91:0,42,594	0/0:20,0:19:48.11:0,48,500	0/0:12,0:12:32.84:0,33,325
chr10	71974864	.	GGTGTGT	G	349.87	PASS	AB=0.785;AC=14;AF=0.269;AN=52;BaseQRankSum=4.205;DP=519;FS=9.851;HRun=0;HaplotypeScore=107.2439;InbreedingCoeff=0.4218;MQ=51.20;MQ0=28;MQRankSum=-0.822;QD=2.75;ReadPosRankSum=-0.091;VQSLOD=1.5392;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:19:0:0,0,0	1/1:2,2:4:2.75:60,3,0	./.	./.	0/0:20,0:20:21.07:0,21,383	0/0:25,0:25:24.55:0,25,491	0/0:23,0:22:20.67:0,21,502	0/0:36,0:32:8.94:0,9,78	0/0:18,0:19:15.05:0,15,336	1/1:14,3:16:8.69:170,9,0	0/1:10,4:13:36.62:71,0,37	0/0:13,0:10:3.01:0,3,46	0/0:11,0:11:5.44:0,5,51	0/0:14,0:14:9.03:0,9,184	0/0:29,0:29:33.11:0,33,813	0/0:19,0:19:27.08:0,27,634	1/1:18,0:19:5.26:52,5,0	0/1:17,0:22:54.17:69,0,54	1/1:14,0:13:3.01:57,3,0	0/0:17,1:18:3.01:0,3,36	1/1:20,0:18:0.88:2,1,0	0/0:15,0:14:5.96:0,6,127	0/0:14,0:14:9.03:0,9,118	0/0:22,0:23:15.05:0,15,212	0/0:15,0:16:15.03:0,15,184	0/0:20,0:20:6.02:0,6,79	1/1:13,0:16:0.88:2,1,0	0/0:5,0:9:6.26:0,6,98
chr10	71975160	.	TTAA	T	2793.38	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.450;DP=570;FS=1.074;HRun=0;HaplotypeScore=75.5886;InbreedingCoeff=0.9961;MQ=60.47;MQ0=2;MQRankSum=2.053;QD=39.91;ReadPosRankSum=1.638;VQSLOD=4.6899;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:33.11:0,33,780	1/1:1,5:6:14.98:229,15,0	0/0:25,0:15:38.99:0,39,755	0/0:21,0:14:42.14:0,42,988	0/0:17,0:17:48.15:0,48,1065	0/0:27,0:27:78.25:0,78,1757	0/0:20,0:20:57.20:0,57,1307	0/0:45,0:45:99:0,129,2986	0/0:14,0:14:42.14:0,42,993	1/1:1,13:14:36.11:607,36,0	1/1:0,12:12:36.04:579,36,0	0/0:16,0:16:48.16:0,48,1131	0/0:20,0:20:60.21:0,60,1417	0/0:16,0:16:48.16:0,48,1133	0/0:19,0:19:54.19:0,54,1276	0/0:15,0:15:45.15:0,45,1038	1/1:3,19:22:48.16:847,48,0	0/0:19,0:19:57.19:0,57,1258	0/0:20,0:19:51.18:0,51,1167	0/0:27,0:27:78.25:0,78,1799	0/0:30,0:30:90.31:0,90,2108	0/0:14,0:14:42.13:0,42,921	0/0:32,0:32:96.30:0,96,2116	0/0:19,0:19:57.20:0,57,1323	1/1:0,16:16:42.08:706,42,0	0/0:25,0:25:72.23:0,72,1591	0/0:31,0:31:90.27:0,90,2024	0/0:15,0:15:45.13:0,45,1008
chr10	71975818	.	CTACT	C	4443.55	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.211;DP=631;FS=17.083;HRun=0;HaplotypeScore=108.0353;InbreedingCoeff=0.9946;MQ=90.10;MQ0=0;MQRankSum=-5.345;QD=49.37;ReadPosRankSum=2.241;VQSLOD=4.3662;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.33:0,96,2615	1/1:1,5:6:18.06:357,18,0	0/0:31,0:31:89.52:0,90,2372	0/0:19,0:19:51.18:0,51,1336	0/0:29,0:29:87.30:0,87,2395	0/0:22,0:22:66.19:0,66,1780	0/0:22,0:22:66.23:0,66,1829	0/0:39,0:39:99:0,117,3149	0/0:20,0:20:60.21:0,60,1664	1/1:2,26:28:78.27:1535,78,0	1/1:0,17:17:41.93:826,42,0	0/0:26,0:26:78.27:0,78,2162	0/0:20,0:20:60.21:0,60,1679	0/0:13,0:13:39.13:0,39,1091	0/0:18,0:18:54.19:0,54,1491	0/0:21,0:21:63.22:0,63,1749	1/1:1,22:23:48.16:948,48,0	0/0:11,0:11:33.11:0,33,922	0/0:27,0:27:81.28:0,81,2176	0/0:24,0:24:69.24:0,69,1911	0/0:23,0:23:69.24:0,69,1893	0/0:19,0:19:51.17:0,51,1371	0/0:21,0:21:63.22:0,63,1689	0/0:33,0:33:99:0,99,2744	1/1:2,14:16:39.13:778,39,0	0/0:24,1:25:15.32:0,15,1893	0/0:28,0:27:81.28:0,81,2266	0/0:18,0:18:51.18:0,51,1407
chr10	71976124	.	TAAC	T	270.78	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=4.055;DP=458;FS=4.026;HRun=0;HaplotypeScore=81.4826;InbreedingCoeff=0.2057;MQ=65.16;MQ0=1;MQRankSum=0.609;QD=4.67;ReadPosRankSum=1.300;VQSLOD=1.2874;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:7:5.81:0,6,56	0/0:3,0:3:2.96:0,3,19	0/1:15,0:14:8.05:8,0,105	0/0:17,0:16:23.13:0,23,332	0/0:28,0:28:69.08:0,69,1286	0/0:16,0:16:39.09:0,39,680	0/0:17,0:17:39.08:0,39,646	0/0:29,0:29:60.10:0,60,827	0/0:18,0:18:48.10:0,48,826	0/1:8,0:8:18.01:18,0,46	0/1:8,0:8:8.02:8,0,35	0/0:10,0:10:21.05:0,21,250	0/0:11,0:11:26.89:0,27,332	0/0:24,0:24:66.08:0,66,996	0/0:23,0:23:54.12:0,54,945	0/0:21,0:21:51.14:0,51,959	0/0:21,0:21:17.92:0,18,146	1/1:5,11:16:24.08:342,24,0	0/0:20,0:20:42.11:0,42,741	0/0:22,0:22:48.15:0,48,935	0/0:14,0:14:39.07:0,39,644	0/0:8,0:7:11.82:0,12,90	0/0:11,0:11:18.04:0,18,207	0/0:7,0:7:3.01:0,3,40	0/1:11,0:11:18.09:18,0,26	0/0:24,0:24:48.13:0,48,829	0/0:32,0:32:81.19:0,81,1433	0/0:17,0:17:51.09:0,51,904
chr10	71976136	.	C	CAATAATAATAATA	2045.64	PASS	AB=0.883;AC=10;AF=0.179;AN=56;BaseQRankSum=6.775;DP=465;FS=2.360;HRun=0;HaplotypeScore=173.4778;InbreedingCoeff=0.0674;MQ=60.48;MQ0=1;MQRankSum=-5.229;QD=24.65;ReadPosRankSum=-0.844;VQSLOD=3.0341;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:8:32.82:267,0,33	0/1:2,0:2:11.98:12,0,27	0/0:11,0:10:26.76:0,27,607	0/0:17,0:17:18.23:0,18,1023	0/0:28,0:28:84.27:0,84,2989	0/0:19,0:19:51.17:0,51,1816	0/0:16,0:16:48.07:0,48,1532	0/0:31,0:31:90.30:0,90,3019	0/0:19,0:19:57.18:0,57,2032	1/1:0,1:9:15:448,15,0	0/1:1,0:9:5.72:307,0,6	0/1:8,0:8:75.97:76,0,159	0/1:11,0:11:30.81:31,0,278	0/0:28,0:28:81.28:0,81,2819	0/0:23,0:23:69.22:0,69,2417	0/0:19,0:19:57.20:0,57,2155	0/1:3,0:22:23.35:892,0,23	0/0:16,0:16:36.12:0,36,1090	0/0:26,0:26:75.21:0,75,2454	0/0:20,0:19:57.20:0,57,2194	0/0:14,0:14:39.13:0,39,1520	0/0:7,0:6:12.04:0,12,195	0/0:8,0:8:24.06:0,24,374	0/1:6,0:6:22.67:23,0,88	0/1:8,0:8:15.30:140,0,15	0/0:24,0:24:69.23:0,69,2445	0/0:37,0:37:99:0,108,3875	0/0:18,0:18:54.19:0,54,2134
chr10	71976651	.	T	TTG	578.59	PASS	AB=0.898;AC=6;AF=0.107;AN=56;BaseQRankSum=1.407;DP=620;FS=60.412;HRun=0;HaplotypeScore=68.7030;InbreedingCoeff=0.2363;MQ=54.93;MQ0=53;MQRankSum=-1.392;QD=5.46;ReadPosRankSum=4.879;VQSLOD=0.5182;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:25:99:120,0,120	0/0:7,0:7:9.15:0,9,81	0/0:35,0:11:13.89:0,14,108	0/0:38,0:9:14.10:0,14,115	0/0:23,0:21:50.83:0,51,378	0/0:17,0:16:35.85:0,36,285	0/0:22,0:19:48.68:0,49,411	0/0:32,0:32:67.97:0,68,562	0/0:28,0:27:69.61:0,70,586	0/0:22,0:22:51.17:0,51,456	0/0:18,0:18:44.62:0,45,343	0/1:20,0:19:54.17:110,0,54	0/0:23,0:20:20.90:0,21,121	0/0:16,0:15:38.35:0,38,321	0/0:18,0:16:41.76:0,42,334	0/0:18,0:17:43.32:0,43,329	0/0:33,0:26:55.49:0,55,445	0/0:15,0:10:26.81:0,27,195	0/0:15,0:14:41.87:0,42,356	0/0:25,0:24:67.93:0,68,513	0/0:13,0:12:26.87:0,27,213	0/1:4,9:13:42.71:71,0,43	0/1:22,0:21:35.50:241,0,36	1/1:20,0:17:21.16:165,21,0	0/0:24,0:23:36.88:0,37,312	0/0:21,0:21:60.73:0,61,432	0/0:27,0:25:53.13:0,53,426	0/0:24,0:20:44.75:0,45,371
chr10	71976652	.	T	TG	524.34	PASS	AB=0.978;AC=6;AF=0.107;AN=56;BaseQRankSum=-0.755;DP=621;FS=42.831;HRun=0;HaplotypeScore=56.9314;InbreedingCoeff=0.2414;MQ=52.84;MQ0=57;MQRankSum=-1.100;QD=4.81;ReadPosRankSum=3.919;VQSLOD=1.0437;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:25:99:120,0,135	0/0:7,0:7:14.79:0,15,102	0/0:34,0:10:15.21:0,15,110	0/0:37,0:8:12.49:0,12,104	0/0:23,0:21:51.70:0,52,382	0/0:17,0:16:35.85:0,36,286	0/0:23,0:19:51.22:0,51,415	0/0:31,0:31:69.36:0,69,572	0/0:27,0:26:69.89:0,70,571	0/0:22,0:22:51.84:0,52,465	0/0:18,0:18:51.82:0,52,371	0/1:19,1:19:58.23:98,0,58	0/0:11,12:20:21.37:0,21,124	0/0:16,0:15:38.46:0,38,310	0/0:18,0:16:41.86:0,42,347	0/0:18,0:17:46.46:0,46,344	0/0:34,0:27:62.03:0,62,463	0/0:15,0:10:27.95:0,28,202	0/0:15,0:14:41.88:0,42,351	0/0:25,0:24:68.90:0,69,519	0/0:12,0:11:26.88:0,27,214	0/1:12,0:12:48.32:50,0,48	0/1:22,1:22:39.44:241,0,39	1/1:19,2:18:20.86:145,21,0	0/0:24,0:23:41.57:0,42,329	0/0:21,0:21:61.76:0,62,447	0/0:28,0:25:61:0,61,461	0/0:24,0:20:44.20:0,44,357
chr10	71978185	.	T	TA	283.07	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.918;DP=622;FS=1.236;HRun=6;HaplotypeScore=59.4949;InbreedingCoeff=0.9850;MQ=79.47;MQ0=0;MQRankSum=-0.194;QD=25.73;ReadPosRankSum=-0.939;VQSLOD=3.4615;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1245	0/0:9,0:9:24.02:0,24,233	0/0:17,0:17:33.16:0,33,322	0/0:13,0:13:18.03:0,18,181	0/0:33,0:33:87.11:0,87,861	0/0:24,0:24:60.10:0,60,603	0/0:23,0:23:60.14:0,60,612	0/0:28,0:28:78.13:0,78,778	0/0:25,0:25:75.14:0,75,752	0/0:14,0:14:36.08:0,36,367	0/0:24,0:24:63.14:0,63,641	0/0:20,0:20:60.12:0,60,604	0/0:21,0:21:60.12:0,60,605	0/0:24,0:24:66.15:0,66,673	0/0:20,0:20:54.12:0,54,551	0/0:17,0:17:45.10:0,45,459	0/0:28,0:28:78.12:0,78,777	1/1:0,11:11:30.10:378,30,0	0/0:27,0:27:78.12:0,78,771	0/0:24,0:24:63.09:0,63,635	0/0:35,0:35:90.20:0,90,915	0/0:20,0:20:54.11:0,54,550	0/0:13,0:13:36.08:0,36,366	0/0:28,0:28:75.17:0,75,765	0/0:18,0:18:54.11:0,54,540	0/0:27,0:27:75.17:0,75,762	0/0:30,0:30:78.17:0,78,796	0/0:7,0:7:21.05:0,21,214
chr10	71978775	.	TTC	T	1273.83	PASS	AB=0.875;AC=20;AF=0.370;AN=54;BaseQRankSum=3.613;DP=634;FS=5.139;HRun=0;HaplotypeScore=108.9547;InbreedingCoeff=0.0615;MQ=71.61;MQ0=8;MQRankSum=1.693;QD=3.61;ReadPosRankSum=-0.086;VQSLOD=1.9662;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:5.80:6,0,18	1/1:1,10:11:12.03:136,12,0	0/0:22,0:17:6.02:0,6,90	0/0:36,0:22:3.20:0,3,42	0/1:26,1:27:11.68:12,0,344	0/0:29,0:30:15.16:0,15,686	0/1:23,3:27:58.74:59,0,566	0/1:36,2:37:24.98:25,0,451	0/1:21,2:23:19.68:20,0,588	1/1:12,18:30:50:507,50,0	0/1:4,13:17:10.98:76,0,11	0/0:13,0:13:8.50:0,8,64	0/0:21,0:22:26.02:0,26,169	0/1:15,1:16:0.79:1,0,425	0/0:26,3:29:14.24:0,14,652	0/1:15,3:19:39.86:40,0,455	1/1:14,8:22:25.72:256,26,0	0/0:14,0:14:15.01:0,15,139	0/1:15,3:17:74.58:75,0,174	0/0:20,5:24:10.97:0,11,550	0/1:13,6:20:2.27:2,0,354	0/0:22,0:22:11.12:0,11,77	0/0:23,0:26:17.47:0,17,123	./.	1/1:8,11:18:15.04:170,15,0	0/1:22,2:24:48.03:48,0,480	0/0:21,0:21:39.13:0,39,571	0/1:15,1:18:12.88:13,0,195
chr10	71978803	.	C	CTGTATGTG	77.28	PASS	AB=0.900;AC=5;AF=0.089;AN=56;BaseQRankSum=3.733;DP=648;FS=13.987;HRun=0;HaplotypeScore=178.5110;InbreedingCoeff=0.1348;MQ=54.86;MQ0=12;MQRankSum=-1.871;QD=0.97;ReadPosRankSum=-0.751;VQSLOD=2.0409;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,8:20:17.30:108,0,17	0/0:14,0:14:24.06:0,24,582	0/0:17,0:10:20.08:0,20,450	0/0:30,0:14:26.21:0,26,651	0/0:26,0:26:66.03:0,66,1682	0/0:35,0:36:96.06:0,96,2295	0/0:30,0:30:74.99:0,75,1906	0/0:36,0:35:98.84:0,99,2088	0/0:25,0:25:68.45:0,68,1789	0/0:31,0:30:54.27:0,54,1584	0/0:26,0:26:35.96:0,36,738	0/0:13,0:12:5.94:0,6,42	0/1:20,0:18:53.01:53,0,121	0/0:16,0:16:45.14:0,45,1188	0/0:28,0:28:75.26:0,75,2085	0/0:22,0:22:63.22:0,63,1760	0/0:20,0:20:13.13:0,13,886	0/0:12,0:12:18.06:0,18,299	0/0:24,0:23:62.88:0,63,1269	0/0:30,0:29:72.23:0,72,1914	0/0:23,0:23:44.86:0,45,1041	0/1:23,0:22:13.24:13,0,43	0/0:25,0:25:15.02:0,15,196	1/1:16,0:15:1.36:3,1,0	0/0:22,0:21:42.31:0,42,902	0/0:24,0:24:67.98:0,68,1669	0/0:20,0:20:60.21:0,60,1593	0/0:18,0:15:33.01:0,33,720
chr10	71978811	.	A	ATGTGTGTGTG	509.68	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=3.710;DP=636;FS=13.043;HRun=0;HaplotypeScore=198.0744;InbreedingCoeff=0.4942;MQ=55.58;MQ0=8;MQRankSum=-4.581;QD=4.08;ReadPosRankSum=-2.018;VQSLOD=1.5586;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:21:3.01:123,3,0	0/0:14,0:14:17.74:0,18,466	0/0:16,0:10:16.63:0,17,352	0/0:28,0:15:19.25:0,19,744	0/0:25,0:26:51.61:0,52,1325	0/0:31,0:31:53.39:0,53,1490	0/0:25,0:25:42.14:0,42,1161	0/0:34,0:33:41.31:0,41,785	0/0:24,0:24:36.09:0,36,913	0/1:31,0:31:22.47:22,0,1389	0/0:27,0:27:42.99:0,43,1063	./.	1/1:10,9:19:8.76:190,9,0	0/0:15,0:15:12.15:0,12,729	0/0:28,0:28:60.16:0,60,1587	0/0:23,0:23:48.16:0,48,1281	0/1:21,0:21:8.29:8,0,1012	0/1:11,0:12:46.59:47,0,215	0/0:19,0:19:13.08:0,13,720	0/0:28,0:27:51.14:0,51,1348	0/0:21,0:22:27.07:0,27,651	0/0:15,7:24:0.47:0,0,1	0/0:13,7:22:0:0,0,0	1/1:18,0:17:9.03:255,9,0	0/0:24,0:23:43.01:0,43,1155	0/0:27,0:27:49.02:0,49,1133	0/0:21,0:21:54.16:0,54,1474	0/0:17,0:15:26.32:0,26,549
chr10	71978813	.	G	GTA	152.85	PASS	AB=0.873;AC=9;AF=0.161;AN=56;BaseQRankSum=7.476;DP=631;FS=4.425;HRun=0;HaplotypeScore=112.7746;InbreedingCoeff=0.6037;MQ=54.60;MQ0=8;MQRankSum=-2.561;QD=1.38;ReadPosRankSum=-2.766;VQSLOD=1.6184;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:4.46:0,4,45	0/0:14,0:14:23.91:0,24,299	0/0:18,0:12:24.85:0,25,343	0/0:27,0:14:39.22:0,39,471	0/0:26,0:26:69.07:0,69,886	0/0:30,0:30:75.16:0,75,998	0/0:27,0:27:69.08:0,69,842	0/0:32,0:31:52.79:0,53,857	0/0:24,0:24:72.05:0,72,834	0/0:31,0:31:68.18:0,68,1046	0/0:26,0:26:45.09:0,45,659	1/1:16,0:15:5.43:24,5,0	0/1:20,0:18:22.29:26,0,22	0/0:15,0:15:40.64:0,41,520	0/0:28,0:28:75.03:0,75,1011	0/0:24,0:24:69.13:0,69,893	0/0:21,0:21:48.07:0,48,689	0/1:5,8:13:54.15:146,0,54	0/0:18,0:18:47.90:0,48,570	0/0:26,0:25:66.15:0,66,900	0/0:20,0:20:41.97:0,42,499	1/1:25,0:24:11.21:48,11,0	1/1:21,0:21:10.97:48,11,0	0/1:16,0:15:0.03:0,0,0	0/0:24,0:23:45.04:0,45,657	0/0:27,0:27:78.16:0,78,1005	0/0:21,0:21:63.14:0,63,882	0/0:17,0:15:31.53:0,32,444
chr10	71980402	.	C	CCT	437.89	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.795;DP=734;FS=6.960;HRun=0;HaplotypeScore=97.2084;InbreedingCoeff=0.9203;MQ=72.53;MQ0=4;MQRankSum=0.712;QD=23.05;ReadPosRankSum=0.236;VQSLOD=3.6369;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:66.09:0,66,755	0/0:6,0:6:18.06:0,18,218	0/0:29,0:20:21.81:0,22,294	0/0:39,0:30:9.12:0,9,201	0/0:21,0:21:51.16:0,51,617	0/0:29,0:29:78.22:0,78,923	0/0:22,0:22:60.18:0,60,724	0/0:33,0:33:75.22:0,75,895	0/0:29,0:30:78.07:0,78,917	0/0:29,0:29:14.73:0,15,658	0/0:16,0:16:30.09:0,30,364	0/0:23,0:23:57.17:0,57,692	0/0:27,0:27:63.18:0,63,747	0/0:22,0:22:60.17:0,60,716	0/0:23,0:23:51.15:0,51,619	0/0:35,0:35:87.25:0,87,1043	0/0:32,0:32:75.22:0,75,897	1/1:5,13:18:33.11:532,33,0	0/0:30,0:30:54.16:0,54,648	0/0:22,0:22:54.16:0,54,655	0/0:34,0:34:72.04:0,72,838	0/0:22,0:22:51.16:0,51,618	0/0:17,0:17:33.10:0,33,400	0/0:35,0:35:67.27:0,67,996	0/0:19,0:19:44.97:0,45,522	0/0:26,0:26:63.19:0,63,765	0/0:50,0:50:99:0,126,1515	0/0:15,0:15:45.14:0,45,546
chr10	71981720	.	C	CG	5925.71	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-13.246;DP=783;FS=9.389;HRun=1;HaplotypeScore=78.2192;InbreedingCoeff=0.9999;MQ=84.90;MQ0=0;MQRankSum=-0.029;QD=40.87;ReadPosRankSum=-0.998;VQSLOD=4.4881;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1500	1/1:0,14:14:39.13:584,39,0	0/0:25,0:25:69.22:0,69,880	0/0:25,0:24:62.98:0,63,779	0/0:30,0:30:90.26:0,90,1138	0/0:26,0:26:78.25:0,78,1011	0/0:23,0:23:66.21:0,66,856	0/0:38,0:38:99:0,99,1273	0/0:33,0:33:93.30:0,93,1207	1/1:2,40:42:99:1749,120,0	1/1:1,24:25:62.83:942,63,0	0/0:20,0:20:60.18:0,60,765	0/0:29,0:29:84.26:0,84,1075	0/0:18,0:18:54.18:0,54,701	0/0:33,0:33:99:0,99,1271	0/0:30,0:30:87.25:0,87,1100	1/1:1,42:43:99:1707,114,0	0/0:20,0:20:60.20:0,60,779	0/0:23,0:23:66.21:0,66,857	0/0:29,0:29:87.27:0,87,1115	0/0:45,0:45:99:0,132,1697	0/0:24,0:24:72.23:0,72,934	0/0:25,0:25:72.23:0,72,934	0/0:27,0:27:81.26:0,81,1052	1/1:0,21:21:63.21:944,63,0	0/0:36,1:37:57.42:0,57,1240	0/0:28,0:28:81.25:0,81,1033	0/0:10,0:10:30.10:0,30,389
chr10	71983401	.	A	ATG	2882.64	PASS	AB=0.803;AC=14;AF=0.250;AN=56;BaseQRankSum=-4.133;DP=725;FS=0.938;HRun=0;HaplotypeScore=104.8533;InbreedingCoeff=0.7480;MQ=65.18;MQ0=3;MQRankSum=2.385;QD=13.86;ReadPosRankSum=1.592;VQSLOD=3.7201;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,25:39:7.04:631,0,7	0/0:11,0:11:24.03:0,24,260	0/1:27,0:21:8.88:9,0,138	0/0:29,0:22:29.09:0,29,330	0/0:30,0:30:66.04:0,66,698	0/0:15,0:15:0.15:0,0,261	0/0:40,0:40:58.58:0,59,844	0/0:31,0:31:47.62:0,48,505	0/0:18,0:18:42.06:0,42,450	0/0:33,0:33:69.03:0,69,728	0/0:18,0:18:39.08:0,39,433	1/1:5,17:22:20.16:427,20,0	1/1:4,18:23:27.09:437,27,0	0/0:21,0:21:54.06:0,54,570	0/0:35,0:35:60.78:0,61,831	0/0:38,0:38:92.70:0,93,925	0/0:31,0:31:77.81:0,78,830	1/1:23,0:23:17.75:125,18,0	0/0:22,0:20:41.92:0,42,425	0/0:19,0:21:38.60:0,39,411	0/0:38,0:38:98.77:0,99,1027	1/1:4,18:22:2.59:272,3,0	1/1:2,9:11:12.04:195,12,0	1/1:22,18:39:68.68:969,69,0	0/0:22,0:22:50.94:0,51,563	0/0:33,0:33:80.22:0,80,840	0/0:16,0:16:39.02:0,39,383	0/0:14,0:14:35.69:0,36,348
chr10	71983416	.	T	TGAGA	818.01	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.409;DP=710;FS=7.752;HRun=0;HaplotypeScore=146.3982;InbreedingCoeff=0.8388;MQ=60.75;MQ0=3;MQRankSum=-1.676;QD=43.05;ReadPosRankSum=0.631;VQSLOD=4.0949;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:58.57:0,59,457	0/0:8,0:8:20.88:0,21,241	0/0:27,0:16:9.03:0,9,129	0/0:35,0:27:7.74:0,8,425	0/0:25,0:25:48.06:0,48,727	0/0:15,0:17:26.50:0,26,494	0/0:33,0:33:73.14:0,73,1186	0/0:30,0:31:54.14:0,54,776	0/0:19,0:19:26.99:0,27,449	0/0:29,0:29:53.99:0,54,842	0/0:23,0:23:40.48:0,40,578	0/0:21,0:21:32.60:0,33,235	0/0:22,0:22:26.64:0,27,149	0/0:24,0:25:51.13:0,51,763	0/0:28,0:31:56.50:0,56,1013	0/0:37,0:37:62.40:0,62,1020	0/0:29,0:29:66.18:0,66,1022	1/1:1,15:19:44.66:913,45,0	0/0:20,0:18:39.06:0,39,514	0/0:16,0:16:29.13:0,29,442	0/0:45,0:47:99:0,114,1759	0/0:21,0:21:20.06:0,20,152	0/0:10,0:10:10.89:0,11,47	0/0:44,0:45:69.47:0,69,584	0/0:19,0:20:42.14:0,42,678	0/0:30,0:31:66.22:0,66,1070	0/0:15,0:15:21.07:0,21,343	0/0:16,0:16:33.11:0,33,533
chr10	71983463	.	ATG	A	259.46	PASS	AB=0.912;AC=12;AF=0.222;AN=54;BaseQRankSum=4.720;DP=632;FS=1.657;HRun=0;HaplotypeScore=126.5880;InbreedingCoeff=-0.0706;MQ=61.84;MQ0=5;MQRankSum=-0.335;QD=0.94;ReadPosRankSum=0.937;VQSLOD=2.5646;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:22:16.90:0,17,171	0/0:4,0:4:6.02:0,6,87	./.	0/0:35,0:24:0.47:0,0,1	0/0:14,0:14:3.01:0,3,44	0/1:14,1:15:17.62:18,0,124	0/1:26,4:32:51.82:52,0,384	0/0:27,0:26:16.30:0,16,213	0/0:15,0:25:27.03:0,27,307	0/1:25,1:26:13.96:14,0,162	0/0:18,0:19:15.03:0,15,199	0/0:21,0:21:22.28:0,22,164	0/0:18,0:18:25.76:0,26,238	0/1:20,2:22:53.18:53,0,73	0/1:24,0:24:0.07:0,0,329	0/1:28,1:31:13.58:14,0,352	0/1:29,2:30:2.73:3,0,368	1/1:12,0:19:22.73:112,23,0	0/0:16,0:16:9.03:0,9,134	0/0:11,0:11:9.02:0,9,114	0/1:47,4:50:56.59:57,0,483	0/0:19,0:21:8.57:0,9,92	0/0:8,0:7:3.01:0,3,43	0/0:38,0:47:58.82:0,59,488	0/0:17,0:17:11.56:0,12,178	0/0:30,0:30:30.08:0,30,391	0/1:10,1:13:25.90:26,0,198	0/1:9,2:11:53.64:54,0,77
chr10	71983561	.	TTGTG	T	866	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=2.267;DP=611;FS=6.392;HRun=0;HaplotypeScore=155.1772;InbreedingCoeff=0.8868;MQ=52.35;MQ0=21;MQRankSum=0.960;QD=8.02;ReadPosRankSum=3.503;VQSLOD=2.4363;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:29:15.36:205,15,0	0/0:6,0:6:15.93:0,16,169	0/0:16,0:3:3.01:0,3,61	./.	0/0:11,0:11:21.06:0,21,422	0/0:21,0:21:42.07:0,42,780	0/0:28,0:27:57.58:0,58,1001	0/0:34,0:29:63.07:0,63,985	0/0:20,0:19:48.16:0,48,927	0/0:27,0:27:57.96:0,58,645	0/0:15,0:14:14.79:0,15,223	1/1:26,0:26:14.41:233,14,0	1/1:13,0:13:11.93:146,12,0	0/0:25,0:24:51.01:0,51,858	0/0:29,0:28:57.38:0,57,1103	0/0:29,0:29:72.82:0,73,1163	0/0:23,0:23:40.78:0,41,477	0/0:13,0:13:35.20:0,35,713	0/0:27,0:20:33.03:0,33,441	0/0:25,0:24:54.17:0,54,921	0/0:50,0:50:87.17:0,87,1437	0/0:4,13:16:0.44:0,0,1	1/1:13,0:13:8.49:128,8,0	1/1:27,0:27:18.97:317,19,0	0/0:24,0:24:39.20:0,39,498	0/0:27,0:27:66.40:0,66,1045	0/0:9,0:9:21.07:0,21,376	0/0:10,0:9:21.07:0,21,385
chr10	71983606	.	AGAGAGAGAGCGC	A	2454.33	PASS	AB=0.929;AC=11;AF=0.196;AN=56;BaseQRankSum=7.618;DP=630;FS=13.895;HRun=0;HaplotypeScore=209.7442;InbreedingCoeff=0.2166;MQ=55.41;MQ0=26;MQRankSum=-4.789;QD=12.72;ReadPosRankSum=-0.726;VQSLOD=1.5148;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:31:73.95:264,0,74	1/1:6,0:7:14.89:358,15,0	0/0:15,0:4:8.51:0,9,81	0/1:23,0:6:19.65:20,0,66	0/0:13,0:13:36.05:0,36,1609	0/0:24,0:24:51.16:0,51,2373	0/0:35,0:33:77.80:0,78,3152	0/0:25,0:19:55.34:0,55,1273	0/0:24,0:22:54.65:0,55,1860	0/1:21,0:23:99:927,0,122	0/1:17,0:18:0.45:1,0,0	0/0:26,0:26:19.61:0,20,753	0/1:23,0:23:11.91:12,0,325	0/0:24,0:23:50.97:0,51,2000	0/0:27,0:26:75.26:0,75,3670	0/0:30,0:29:83.48:0,83,3112	1/1:19,0:20:7.85:563,8,0	0/0:14,0:12:12.02:0,12,869	0/0:19,0:15:43.95:0,44,1554	0/0:21,0:19:46.95:0,47,1793	0/0:48,0:45:99:0,102,3669	0/0:20,0:18:2.50:0,3,285	0/1:22,0:22:16.72:17,0,247	0/0:30,0:29:9.17:0,9,497	0/1:11,10:22:25.83:442,0,26	0/0:26,0:24:24.61:0,25,2091	0/0:5,0:5:15.05:0,15,704	0/0:11,0:9:27.09:0,27,1047
chr10	71983608	.	AGAGAGAGCGCGC	A	2989.99	PASS	AB=0.857;AC=12;AF=0.214;AN=56;BaseQRankSum=5.986;DP=623;FS=1.259;HRun=0;HaplotypeScore=204.5158;InbreedingCoeff=0.4349;MQ=55.49;MQ0=26;MQRankSum=-4.726;QD=16.34;ReadPosRankSum=0.617;VQSLOD=2.1264;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:30:99:152,0,152	1/1:1,6:7:14.89:440,15,0	0/0:15,0:4:7.27:0,7,110	0/1:23,0:6:41.38:41,0,123	0/0:13,0:13:36.05:0,36,1683	0/0:24,0:24:51.17:0,51,2489	0/0:35,0:33:74.83:0,75,3230	0/0:24,0:18:49:0,49,1411	0/0:25,0:23:57.67:0,58,1944	0/1:8,17:24:77.72:1203,0,78	0/1:3,14:17:0.25:1,0,0	0/0:26,0:26:28.75:0,29,769	0/0:23,0:23:17.75:0,18,396	0/0:25,0:24:48.02:0,48,1898	0/0:27,0:26:75.26:0,75,3762	0/0:30,0:29:80.85:0,81,3087	1/1:14,4:18:36.09:881,36,0	0/1:14,0:12:7.95:8,0,637	0/0:20,0:16:45.43:0,45,1658	0/0:20,0:18:47.53:0,48,1806	0/0:47,0:44:99:0,102,3802	0/0:19,0:17:17.43:0,17,378	0/0:21,0:21:26.75:0,27,406	0/0:30,0:29:25.43:0,25,584	1/1:17,4:21:15.09:418,15,0	0/1:25,0:23:4.96:5,0,1948	0/0:5,0:5:15.05:0,15,687	0/0:11,0:9:27.09:0,27,1092
chr10	71983614	.	AGC	A	1584.04	PASS	AB=0.988;AC=25;AF=0.446;AN=56;BaseQRankSum=9.053;DP=603;FS=6.284;HRun=0;HaplotypeScore=123.2179;InbreedingCoeff=0.7464;MQ=59.15;MQ0=24;MQRankSum=-2.797;QD=5.96;ReadPosRankSum=2.825;VQSLOD=2.9073;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,2:27:46.62:314,47,0	1/1:7,0:7:14.45:80,14,0	0/1:16,0:5:12.16:12,0,18	0/1:25,0:9:13.04:28,0,13	0/0:15,0:15:35.83:0,36,357	0/0:28,0:28:56.84:0,57,610	0/0:36,0:34:50.28:0,50,486	0/0:23,0:19:45.32:0,45,340	0/0:24,0:22:36.26:0,36,305	1/1:22,0:21:34.43:183,34,0	0/0:16,0:16:0:0,0,1	1/1:22,0:22:12.42:88,12,0	1/1:21,0:21:24.20:185,24,0	0/0:24,0:23:19.77:0,20,278	0/0:29,0:28:65:0,65,711	0/0:28,0:27:41.88:0,42,575	1/1:12,1:13:23.08:128,23,0	1/1:13,1:12:14.89:151,15,0	0/0:21,0:18:7.42:0,7,212	0/0:18,0:17:12.30:0,12,220	0/0:45,0:42:64.43:0,64,634	1/1:17,0:15:18.43:146,18,0	1/1:23,0:23:32.67:272,33,0	1/1:31,0:31:11.34:126,11,0	1/1:17,0:18:14.14:77,14,0	0/0:20,0:18:6.02:0,6,249	0/1:5,0:5:1.88:2,0,108	0/0:10,0:9:18.80:0,19,204
chr10	71983616	.	C	CGA	180.89	PASS	AB=0.953;AC=12;AF=0.214;AN=56;BaseQRankSum=5.241;DP=585;FS=4.499;HRun=0;HaplotypeScore=125.1957;InbreedingCoeff=0.4723;MQ=60.14;MQ0=22;MQRankSum=-0.397;QD=1.12;ReadPosRankSum=0.594;VQSLOD=2.2319;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:28:3.70:0,4,75	0/0:7,0:7:8.88:0,9,43	0/1:16,0:5:0.87:1,0,70	0/0:26,0:9:7.15:0,7,134	0/0:15,0:15:42.05:0,42,515	0/0:27,0:27:63.03:0,63,778	0/0:33,0:32:75.12:0,75,977	0/0:27,0:23:52.39:0,52,704	0/0:24,0:22:57.06:0,57,662	0/0:22,0:21:15.39:0,15,136	0/1:16,0:16:0.20:0,0,1	1/1:18,0:18:7.02:77,7,0	0/1:11,7:18:5.23:41,0,5	0/1:21,0:20:24.96:25,0,305	0/0:30,0:29:78.06:0,78,1016	0/0:28,0:27:75.14:0,75,977	0/0:17,0:17:14.57:0,15,72	0/1:12,0:11:2.71:29,0,3	0/0:24,0:21:45.07:0,45,592	0/0:17,0:16:42.10:0,42,537	0/0:45,0:42:95.92:0,96,1197	0/1:12,0:12:0.59:19,0,1	1/1:20,0:20:3.39:29,3,0	1/1:29,0:28:9.99:103,10,0	0/0:18,0:18:11.25:0,11,57	0/0:18,0:16:40.34:0,40,496	0/0:5,0:5:15.03:0,15,175	0/0:9,0:8:24.05:0,24,308
chr10	71983702	.	TTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC	T	106.39	PASS	AC=10;AF=0.200;AN=50;BaseQRankSum=0.243;DP=545;FS=3.789;HRun=0;HaplotypeScore=504.5753;InbreedingCoeff=0.7001;MQ=51.52;MQ0=26;MQRankSum=2.154;QD=1.18;ReadPosRankSum=-0.104;VQSLOD=0.4657;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:28:6.01:75,6,0	0/0:8,0:8:12.03:0,12,352	./.	./.	0/0:20,0:18:11.40:0,11,908	0/0:20,0:19:36.11:0,36,3144	0/0:33,0:30:52.99:0,53,3347	0/0:26,0:20:17.42:0,17,357	0/0:24,0:24:42.11:0,42,3623	0/0:28,0:26:24.08:0,24,1035	0/0:8,0:8:6.02:0,6,251	./.	1/1:12,0:12:3.01:49,3,0	0/0:21,0:21:36.11:0,36,3295	0/0:26,0:26:42.09:0,42,3643	0/0:17,0:17:21.07:0,21,2141	0/0:24,0:24:30.10:0,30,1096	0/0:13,0:13:18.06:0,18,1175	0/0:22,0:17:27.08:0,27,1436	0/0:15,0:14:9.03:0,9,1502	0/0:37,0:36:26.76:0,27,1259	1/1:11,0:11:3:26,3,0	1/1:9,9:18:0.51:15,1,0	1/1:17,0:14:2.89:69,3,0	0/0:17,0:17:33.11:0,33,1267	0/0:31,0:29:42.14:0,42,4578	0/0:18,0:16:29.69:0,30,2163	0/0:14,0:14:18.05:0,18,1483
chr10	71983718	.	CT	C	126.77	PASS	AB=0.857;AC=2;AF=0.038;AN=52;BaseQRankSum=5.788;DP=461;FS=2.514;HRun=2;HaplotypeScore=59.9299;InbreedingCoeff=-0.0423;MQ=48.77;MQ0=43;MQRankSum=-2.690;QD=5.76;ReadPosRankSum=-2.245;VQSLOD=-0.0115;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:17:48.05:0,48,641	0/0:7,0:6:15.94:0,16,219	./.	./.	0/0:18,0:16:39.12:0,39,542	0/0:14,0:13:34.98:0,35,446	0/0:30,0:26:69.69:0,70,979	0/0:25,0:14:39.12:0,39,526	0/0:21,0:20:60.13:0,60,841	0/0:26,0:24:35.76:0,36,578	0/1:7,0:7:18.63:19,0,158	0/0:16,0:15:42.13:0,42,588	0/0:6,0:6:12.04:0,12,171	0/0:17,0:17:48.15:0,48,676	0/0:19,0:19:54.17:0,54,767	0/0:12,0:12:29.66:0,30,364	0/0:25,0:25:48.70:0,49,684	0/1:9,6:15:99:195,0,221	0/0:27,0:16:45.14:0,45,633	0/0:11,0:11:33.05:0,33,437	0/0:32,0:29:75.26:0,75,985	0/0:8,0:8:20.99:0,21,278	0/0:14,0:14:18.49:0,18,237	0/0:14,0:11:21.05:0,21,274	0/0:18,0:18:22.59:0,23,594	0/0:29,0:27:75.25:0,75,1088	0/0:14,0:12:33.11:0,33,468	0/0:11,0:11:27.09:0,27,393
chr10	71983722	.	CT	C	509.33	PASS	AB=0.780;AC=5;AF=0.096;AN=52;BaseQRankSum=6.378;DP=465;FS=0.752;HRun=2;HaplotypeScore=77.0477;InbreedingCoeff=-0.1185;MQ=48.04;MQ0=44;MQRankSum=-2.038;QD=6.29;ReadPosRankSum=-2.178;VQSLOD=-0.0631;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:19:49.57:0,50,581	0/1:6,1:6:20.86:21,0,199	./.	./.	0/0:18,0:16:36.11:0,36,495	0/0:16,0:15:37.99:0,38,488	0/0:28,0:24:66.68:0,67,936	0/0:23,0:12:33:0,33,407	0/0:21,0:20:57.09:0,57,758	0/1:15,8:21:99:257,0,372	0/1:4,3:7:49.69:50,0,155	0/0:17,0:16:39.34:0,39,523	0/0:9,0:9:23.86:0,24,260	0/0:17,0:17:48.16:0,48,694	0/0:18,0:18:51.16:0,51,724	0/0:11,0:11:29.67:0,30,375	0/1:18,8:26:99:200,0,543	0/0:15,0:15:26.25:0,26,287	0/0:26,0:15:45.15:0,45,637	0/0:10,0:10:21.07:0,21,306	0/0:28,0:25:67.80:0,68,919	0/0:17,0:17:41.93:0,42,480	0/0:14,0:14:15.48:0,15,193	0/0:18,0:15:0.48:0,0,287	0/1:14,4:18:96.84:97,0,531	0/0:30,0:27:75.25:0,75,1071	0/0:13,0:11:33.11:0,33,479	0/0:10,0:10:27.09:0,27,390
chr10	71983734	.	CT	C	1417.48	PASS	AB=1.000;AC=11;AF=0.212;AN=52;BaseQRankSum=6.499;DP=409;FS=3.024;HRun=2;HaplotypeScore=59.1511;InbreedingCoeff=0.8390;MQ=48.09;MQ0=52;MQRankSum=-2.671;QD=21.48;ReadPosRankSum=-0.730;VQSLOD=3.4123;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,9:12:32.67:382,33,0	0/0:5,0:4:12.03:0,12,155	./.	./.	0/0:14,0:12:30.07:0,30,390	0/0:15,0:14:37.96:0,38,447	0/0:30,0:26:75.66:0,76,1015	0/0:28,0:11:23.79:0,24,290	0/0:17,1:17:9.12:0,9,553	0/0:23,0:21:60.16:0,60,797	0/1:6,0:6:10.94:11,0,177	1/1:1,9:9:18.06:233,18,0	1/1:2,6:8:18.06:232,18,0	0/0:13,0:13:30.10:0,30,433	0/0:15,0:15:36.12:0,36,523	0/0:12,0:12:35.66:0,36,427	0/0:29,0:29:75.16:0,75,981	0/0:15,0:15:36.12:0,36,514	0/0:21,0:13:33.10:0,33,451	0/0:7,0:7:21.07:0,21,300	0/0:23,0:19:54.10:0,54,663	1/1:1,13:13:36.12:466,36,0	0/0:9,0:9:0.47:0,0,1	1/1:4,8:9:20.89:264,21,0	0/0:20,0:20:60.20:0,60,840	0/0:24,0:19:48.16:0,48,692	0/0:13,0:11:31.29:0,31,380	0/0:8,0:8:18.06:0,18,261
chr10	71993891	.	TGGAG	T	342.29	PASS	AB=0.872;AC=6;AF=0.107;AN=56;BaseQRankSum=4.907;DP=1059;FS=14.350;HRun=0;HaplotypeScore=112.0047;InbreedingCoeff=-0.0102;MQ=37.99;MQ0=169;MQRankSum=-2.287;QD=2.98;ReadPosRankSum=-1.556;VQSLOD=1.1165;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:28:39.08:0,39,498	0/1:11,0:5:11.02:11,0,14	0/0:108,0:12:25.53:0,26,239	0/0:87,0:8:1.10:0,1,72	0/0:20,0:19:44.87:0,45,705	0/0:21,0:16:39.01:0,39,696	0/0:46,0:42:87:0,87,1446	0/0:120,0:54:99:0,146,1436	0/0:37,0:29:46.80:0,47,849	0/1:37,11:25:99:192,0,103	0/1:7,7:11:10.85:109,0,11	0/0:25,0:18:38.97:0,39,514	0/0:21,0:15:17.93:0,18,181	0/0:34,0:28:66.08:0,66,1434	0/0:37,0:28:65.69:0,66,1117	0/0:44,0:34:77.09:0,77,1304	0/1:18,0:15:45.05:89,0,45	0/1:8,4:9:3.32:50,0,3	0/0:45,0:16:8.76:0,9,325	0/0:22,0:17:27.04:0,27,435	0/0:93,0:78:99:0,139,2899	0/0:19,0:16:8.29:0,8,262	0/0:18,0:15:5.83:0,6,186	0/0:14,0:10:15.03:0,15,227	0/1:12,0:6:11.99:12,0,20	0/0:57,0:35:51.94:0,52,855	0/0:30,0:29:77.66:0,78,1364	0/0:13,0:11:20.99:0,21,466
chr10	71996080	.	GT	G	5680.05	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.452;DP=649;FS=2.509;HRun=1;HaplotypeScore=71.7052;InbreedingCoeff=0.9936;MQ=86.93;MQ0=0;MQRankSum=-2.116;QD=37.87;ReadPosRankSum=1.953;VQSLOD=5.5776;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,48:48:99:1885,135,0	0/0:4,0:4:12.04:0,12,192	0/0:28,0:28:81.26:0,81,1261	0/0:15,0:15:45.14:0,45,679	0/0:24,0:24:72.25:0,72,1149	0/0:18,0:18:54.17:0,54,840	0/0:24,0:24:72.25:0,72,1148	0/0:34,0:34:99:0,99,1491	0/0:23,0:23:69.22:0,69,1077	0/0:35,0:35:99:0,105,1678	0/0:13,0:13:39.10:0,39,575	1/1:0,26:26:66.22:923,66,0	1/1:0,26:26:75.25:1048,75,0	0/0:26,0:26:78.27:0,78,1244	0/0:27,0:27:81.28:0,81,1295	0/0:23,0:23:69.24:0,69,1100	0/0:31,0:31:93.32:0,93,1486	0/0:21,0:21:63.19:0,63,973	0/0:23,0:23:63.20:0,63,983	0/0:26,0:26:78.25:0,78,1224	0/0:29,0:29:84.26:0,84,1292	1/1:0,11:11:33.11:461,33,0	1/1:0,16:16:42.14:587,42,0	1/1:0,23:23:57.15:775,57,0	0/0:14,0:14:42.14:0,42,671	0/0:23,0:23:69.24:0,69,1101	0/0:27,0:27:78.25:0,78,1221	0/0:11,0:11:33.11:0,33,527
chr10	71997184	.	CGTGTGT	C	1608.35	PASS	AB=0.711;AC=17;AF=0.327;AN=52;BaseQRankSum=9.470;DP=592;FS=18.840;HRun=0;HaplotypeScore=160.7622;InbreedingCoeff=0.6960;MQ=51.70;MQ0=9;MQRankSum=-3.670;QD=8.69;ReadPosRankSum=1.394;VQSLOD=1.7959;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:29:8.57:68,9,0	1/1:1,0:4:6.02:77,6,0	0/0:30,0:17:14.03:0,14,238	0/0:34,0:11:12.03:0,12,194	0/0:10,0:10:21.05:0,21,540	0/0:16,0:17:41.96:0,42,1017	0/0:26,0:28:51.63:0,52,1481	0/0:23,0:26:43.87:0,44,809	0/0:15,0:18:22.03:0,22,947	1/1:10,0:19:3.48:433,3,0	./.	1/1:8,12:23:26.23:432,26,0	1/1:8,4:13:15.03:278,15,0	0/0:20,0:23:48.14:0,48,1335	0/0:22,0:23:49.95:0,50,1627	0/0:19,0:19:51.16:0,51,1499	0/1:21,0:24:40.86:108,0,41	1/1:20,0:26:13.09:302,13,0	0/0:23,0:24:32:0,32,897	0/0:13,0:12:32.95:0,33,830	0/0:73,0:80:99:0,136,3754	0/1:4,9:15:0.02:0,0,0	./.	1/1:10,4:21:2.89:49,3,0	0/1:5,0:10:8.64:34,0,9	0/0:19,0:20:44.90:0,45,1175	0/0:10,0:12:26.25:0,26,753	0/0:11,0:11:19.62:0,20,533
chr10	71997229	.	CTGTGTGTGTG	C	617.76	PASS	AB=0.605;AC=6;AF=0.107;AN=56;BaseQRankSum=4.755;DP=816;FS=8.724;HRun=0;HaplotypeScore=242.8460;InbreedingCoeff=0.7459;MQ=51.98;MQ0=36;MQRankSum=-3.814;QD=7.44;ReadPosRankSum=-1.588;VQSLOD=0.7551;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:40:51.18:0,51,2431	0/0:9,0:9:20.99:0,21,911	0/0:87,0:21:3.23:0,3,1056	0/0:94,0:22:47.05:0,47,1311	0/0:9,0:9:18.06:0,18,784	0/0:25,0:26:66.23:0,66,2609	0/0:36,0:36:90.31:0,90,4015	0/0:31,0:31:75.26:0,75,2497	0/0:24,0:24:66.23:0,66,2954	0/0:27,0:28:60.17:0,60,2308	0/0:10,0:10:9.03:0,9,297	1/1:8,15:23:11.49:264,11,0	1/1:3,14:17:17.93:465,18,0	0/0:23,0:22:63.21:0,63,2962	0/0:28,0:30:75.23:0,75,3071	0/0:25,0:26:57.20:0,57,2585	0/0:28,0:30:48.16:0,48,2014	0/0:13,0:30:63.20:0,63,1687	0/0:19,0:19:48.16:0,48,1871	0/0:12,0:12:27.09:0,27,1194	0/0:83,0:83:99:0,198,8226	0/1:6,12:18:0.20:0,0,0	0/0:4,9:13:0:0,0,0	0/1:9,16:24:0.37:1,0,0	0/0:11,0:11:12.04:0,12,619	0/0:23,0:26:72.23:0,72,3135	0/0:23,0:23:63.22:0,63,2861	0/0:8,0:8:24.06:0,24,962
chr10	71997290	.	ATCTG	A	9028.02	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=15.464;DP=781;FS=15.035;HRun=0;HaplotypeScore=153.4505;InbreedingCoeff=0.9896;MQ=60.35;MQ0=4;MQRankSum=-2.489;QD=28.21;ReadPosRankSum=4.201;VQSLOD=3.8684;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,50:59:99:1875,114,0	1/1:5,8:13:24.08:395,24,0	0/0:47,0:34:50.69:0,51,884	0/0:24,0:25:40.73:0,41,781	0/0:14,0:14:39.13:0,39,930	0/0:25,0:25:51.16:0,51,1156	0/0:36,0:36:77.97:0,78,1745	0/0:28,0:27:42.08:0,42,713	0/0:34,0:34:84.24:0,84,1876	1/1:10,19:29:57.12:812,57,0	1/1:2,10:12:24.08:396,24,0	1/1:10,24:34:59.66:957,60,0	1/1:10,18:28:51.17:841,51,0	0/0:21,0:21:56.87:0,57,1153	0/0:37,0:37:93.27:0,93,2106	0/0:29,0:29:78.23:0,78,1750	1/1:10,29:39:69.24:1138,69,0	1/1:8,23:31:60.20:989,60,0	0/0:19,0:17:27.09:0,27,596	0/0:25,0:25:63.17:0,63,1435	0/0:74,1:75:99:0,119,3487	1/1:4,17:21:29.91:495,30,0	1/1:5,14:19:27.09:446,27,0	1/1:11,15:26:32.84:535,33,0	1/1:3,6:9:9.03:148,9,0	0/0:19,0:19:42.12:0,42,909	0/0:19,0:19:27.09:0,27,634	0/0:6,0:6:18:0,18,338
chr10	72001373	.	GTGTC	G	1221.62	PASS	AB=0.837;AC=6;AF=0.107;AN=56;BaseQRankSum=8.702;DP=608;FS=5.844;HRun=0;HaplotypeScore=94.9057;InbreedingCoeff=0.6013;MQ=68.53;MQ0=6;MQRankSum=-0.532;QD=11.63;ReadPosRankSum=3.220;VQSLOD=2.3574;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,29:38:60.20:990,60,0	0/0:6,0:6:15.03:0,15,302	0/0:43,0:25:32.87:0,33,514	0/0:34,0:23:28.81:0,29,492	0/0:12,0:12:24.06:0,24,504	0/0:27,0:27:60.21:0,60,1392	0/0:24,0:24:72.21:0,72,1543	0/0:36,0:36:57.08:0,57,1183	0/0:19,0:19:45.14:0,45,1029	0/0:25,0:25:54.04:0,54,1196	0/0:7,0:7:18.06:0,18,441	0/0:22,0:22:51.14:0,51,1126	0/0:18,0:18:42.11:0,42,926	0/0:18,0:18:48.11:0,48,985	0/0:30,0:30:69.20:0,69,1444	0/1:11,8:19:99:295,0,661	0/0:27,0:27:57.16:0,57,1297	1/1:3,0:16:6.01:56,6,0	0/1:31,1:31:3.44:3,0,946	0/0:15,0:15:39.12:0,39,906	0/0:21,0:21:51.16:0,51,1149	0/0:7,0:7:21.06:0,21,466	0/0:11,0:11:24.03:0,24,444	0/0:25,0:25:66.23:0,66,1568	0/0:5,0:5:15.02:0,15,271	0/0:36,0:36:84.27:0,84,1886	0/0:23,0:23:57.20:0,57,1396	0/0:12,0:12:15.05:0,15,351
chr10	72001619	.	CCT	C	764.26	PASS	AB=0.879;AC=16;AF=0.296;AN=54;BaseQRankSum=4.414;DP=252;FS=2.086;HRun=0;HaplotypeScore=50.1378;InbreedingCoeff=0.5762;MQ=67.96;MQ0=7;MQRankSum=-1.398;QD=15.92;ReadPosRankSum=1.365;VQSLOD=3.4893;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,6:10:21.07:260,21,0	0/0:1,0:1:3.01:0,3,47	0/0:34,0:12:3.35:0,3,161	0/0:36,1:14:18.28:0,18,243	0/0:7,0:7:8.18:0,8,141	0/0:13,0:13:11.88:0,12,388	0/0:7,0:7:10.68:0,11,160	0/0:18,0:17:45.07:0,45,705	0/0:3,0:3:9.03:0,9,148	0/0:6,0:6:17.09:0,17,252	0/0:5,0:5:6.49:0,6,100	1/1:0,2:2:6.02:74,6,0	1/1:0,5:5:15.05:186,15,0	./.	0/0:6,0:6:9.03:0,9,148	0/0:3,0:3:3.01:0,3,49	0/0:8,0:8:20.99:0,21,314	1/1:3,6:9:15.05:186,15,0	0/1:8,1:9:19.62:20,0,188	0/0:8,0:8:22.52:0,23,311	0/0:25,0:25:62.24:0,62,996	1/1:0,2:2:6.02:74,6,0	1/1:1,1:2:3.01:37,3,0	1/1:1,2:3:6.02:74,6,0	0/0:5,0:5:9.01:0,9,121	0/1:5,1:6:25.13:25,0,136	0/0:7,0:7:10.28:0,10,150	0/0:10,0:10:15.05:0,15,235
chr10	72001638	.	TC	T	661.38	PASS	AB=0.787;AC=11;AF=0.204;AN=54;BaseQRankSum=7.634;DP=320;FS=155.666;HRun=3;HaplotypeScore=89.1465;InbreedingCoeff=-0.2930;MQ=67.86;MQ0=20;MQRankSum=-7.179;QD=6.01;ReadPosRankSum=-1.498;VQSLOD=-0.3340;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:30.08:0,30,393	./.	0/0:55,0:13:14.23:0,14,104	0/0:71,1:26:41.62:0,42,565	0/1:3,2:5:16.06:16,0,77	0/1:11,1:12:10.67:11,0,266	0/1:5,6:11:99:180,0,120	0/1:21,9:29:99:257,0,530	0/0:4,0:4:10.59:0,11,133	0/1:7,1:8:17.55:18,0,205	0/0:5,1:6:11.01:0,11,111	0/0:3,0:3:6.02:0,6,86	0/0:6,0:6:15.05:0,15,206	0/0:1,0:1:2.92:0,3,17	0/0:5,0:5:12.04:0,12,173	0/1:3,1:4:29.66:30,0,37	0/1:5,3:8:67.23:67,0,111	0/0:6,0:6:15.05:0,15,212	0/1:10,3:13:76.18:76,0,301	0/1:7,3:10:82.36:82,0,225	0/0:22,2:24:35.63:0,36,791	0/0:3,0:3:6.02:0,6,79	0/1:2,1:3:28.04:28,0,39	0/0:2,0:2:6.02:0,6,82	0/0:4,0:4:12.04:0,12,167	0/0:4,0:4:12.04:0,12,171	0/1:5,1:6:38.58:39,0,115	0/0:4,1:5:12.04:0,12,173
chr10	72001650	.	T	TCC	366.19	PASS	AB=0.964;AC=9;AF=0.167;AN=54;BaseQRankSum=1.919;DP=316;FS=7.972;HRun=3;HaplotypeScore=116.1592;InbreedingCoeff=0.0181;MQ=59.18;MQ0=20;MQRankSum=-4.017;QD=6.66;ReadPosRankSum=-1.504;VQSLOD=-0.6097;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,8:10:23.98:366,24,0	./.	0/0:48,0:9:15.43:0,15,114	0/0:67,0:21:37.26:0,37,342	0/0:6,0:6:8.90:0,9,99	0/0:11,0:11:9.14:0,9,232	0/1:11,0:11:27.78:28,0,168	0/0:27,0:27:67.14:0,67,661	0/1:4,0:3:6.79:7,0,75	0/1:9,0:9:29.37:29,0,200	0/0:9,0:9:3.99:0,4,42	0/0:3,0:3:8.86:0,9,98	0/0:5,0:5:12.04:0,12,167	0/0:2,0:2:3.01:0,3,34	0/0:6,0:6:7.85:0,8,145	0/1:5,0:5:13:13,0,30	0/0:8,0:8:13.57:0,14,135	0/0:4,0:4:12.02:0,12,150	0/0:17,0:17:25.83:0,26,371	0/0:8,0:8:23.57:0,24,220	0/0:21,0:21:53.91:0,54,615	0/0:4,0:4:4.55:0,5,28	0/1:7,0:6:3.88:4,0,36	0/0:1,0:1:3.01:0,3,42	0/0:5,0:5:12.04:0,12,167	0/1:2,1:3:35.96:49,0,36	0/1:6,0:6:0.13:0,0,102	0/0:5,0:5:12.02:0,12,149
chr10	72001665	.	C	CT	740.99	PASS	AB=0.886;AC=23;AF=0.426;AN=54;BaseQRankSum=8.665;DP=224;FS=137.202;HRun=0;HaplotypeScore=92.5240;InbreedingCoeff=-0.2552;MQ=69.31;MQ0=15;MQRankSum=-6.987;QD=5.66;ReadPosRankSum=4.772;VQSLOD=0.9226;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:8:0.57:1,0,35	./.	0/0:29,0:6:8.74:0,9,77	0/0:48,0:19:8.91:0,9,226	0/1:6,0:6:29.22:29,0,96	0/1:5,3:8:84.12:84,0,86	0/1:9,0:9:10.27:118,0,10	0/1:17,0:16:34.91:35,0,181	0/1:2,1:2:27.82:28,0,36	0/1:3,1:4:39.14:39,0,50	0/1:6,1:7:10.67:38,0,11	0/0:1,0:1:3:0,3,27	0/0:5,0:5:12.04:0,12,167	1/1:1,1:2:3.01:42,3,0	0/1:3,2:5:68.86:74,0,69	0/1:4,1:5:10.09:55,0,10	1/1:6,0:6:10.26:56,10,0	0/0:2,0:2:6.02:0,6,83	0/1:12,1:12:40.29:40,0,182	0/1:6,0:6:36.78:37,0,70	0/1:14,0:14:14.84:15,0,336	1/1:2,1:3:1.30:31,1,0	1/1:5,1:5:8.66:76,9,0	0/0:1,0:1:3.01:0,3,42	0/0:4,0:4:9.02:0,9,110	0/1:3,0:3:11.33:11,0,35	0/1:3,3:6:50.14:88,0,50	0/0:2,0:2:6.02:0,6,84
chr10	72001682	.	TTGC	T	618.57	PASS	AB=0.829;AC=22;AF=0.647;AN=34;BaseQRankSum=3.935;DP=52;FS=53.921;HRun=0;HaplotypeScore=54.4691;InbreedingCoeff=0.0851;MQ=90.66;MQ0=1;MQRankSum=-2.558;QD=15.09;ReadPosRankSum=3.886;VQSLOD=1.4010;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:8,0:2:0.77:1,0,60	0/1:11,0:7:53.18:53,0,80	0/0:1,0:1:3.01:0,3,48	1/1:0,3:3:9.03:122,9,0	./.	./.	1/1:0,1:1:3.01:44,3,0	0/1:1,1:2:45.41:45,0,47	1/1:1,1:2:3.01:45,3,0	./.	0/0:2,0:2:3:0,3,25	1/1:0,1:1:3.01:48,3,0	1/1:1,2:3:6.02:93,6,0	1/1:0,1:1:3.01:49,3,0	./.	0/0:1,0:1:2.97:0,3,20	0/1:2,1:2:13.94:44,0,14	./.	0/0:2,0:2:0:0,0,0	1/1:0,1:1:3.01:42,3,0	1/1:0,1:1:3.01:44,3,0	./.	./.	./.	1/1:0,3:3:6.91:99,7,0	./.
chr10	72001687	.	TGAGA	T	720.63	PASS	AB=1.000;AC=24;AF=0.923;AN=26;BaseQRankSum=3.167;DP=31;FS=22.482;HRun=0;HaplotypeScore=80.1331;InbreedingCoeff=-0.1093;MQ=122.79;MQ0=1;MQRankSum=-2.167;QD=23.25;ReadPosRankSum=3.433;VQSLOD=1.4747;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:6,0:3:6.56:7,0,32	0/1:9,0:6:7.37:7,0,73	./.	1/1:0,3:3:9.03:141,9,0	./.	./.	1/1:0,1:1:3.01:51,3,0	1/1:0,1:1:3.01:58,3,0	1/1:0,1:1:3.01:52,3,0	./.	./.	1/1:0,1:1:3.01:55,3,0	1/1:0,2:2:6.02:107,6,0	1/1:0,1:1:3.01:56,3,0	./.	./.	1/1:0,1:1:3.01:58,3,0	./.	./.	1/1:0,1:1:3.01:48,3,0	1/1:0,1:1:3.01:51,3,0	./.	./.	./.	1/1:0,3:3:8.06:117,8,0	./.
chr10	72001716	.	CAT	C	409.24	PASS	AB=0.972;AC=22;AF=0.579;AN=38;BaseQRankSum=-5.094;DP=49;FS=15.107;HRun=0;HaplotypeScore=63.5786;InbreedingCoeff=0.1541;MQ=135.83;MQ0=0;MQRankSum=4.100;QD=10.23;ReadPosRankSum=-4.983;VQSLOD=0.8921;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	./.	./.	1/1:3,3:6:15.08:150,15,0	0/1:7,1:8:15.54:37,0,16	1/1:1,0:1:2.99:24,3,0	0/0:3,0:3:3.58:0,4,9	./.	1/1:2,0:2:6:51,6,0	0/0:1,0:1:0.89:0,1,2	0/0:1,0:1:2.22:0,2,7	0/0:1,0:1:2.60:0,3,10	./.	./.	1/1:3,0:3:0.10:39,0,0	0/1:3,0:3:10.16:16,0,10	0/1:3,0:3:0.20:39,0,0	1/1:1,0:1:2.94:18,3,0	./.	1/1:3,0:3:0.63:44,1,0	./.	1/1:3,0:3:2.99:24,3,0	0/0:2,0:2:1.55:0,2,4	0/0:1,0:1:2.04:0,2,6	./.	./.	1/1:1,0:1:3:26,3,0	0/1:3,0:3:2.90:3,0,7	1/1:3,0:3:5.98:46,6,0
chr10	72001783	.	C	CTGTGTGTGTGTG	2389.05	PASS	AB=0.926;AC=11;AF=0.204;AN=54;BaseQRankSum=1.965;DP=412;FS=20.536;HRun=0;HaplotypeScore=159.9177;InbreedingCoeff=0.6398;MQ=62.81;MQ0=2;MQRankSum=-4.995;QD=28.11;ReadPosRankSum=-2.536;VQSLOD=1.5131;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:7:12.04:0,12,423	0/0:28,0:21:24.55:0,25,525	0/0:17,0:12:8.85:0,9,141	0/0:21,0:21:42.14:0,42,1357	0/0:13,0:13:30.05:0,30,902	0/0:22,0:22:36.05:0,36,966	0/0:23,0:23:45.08:0,45,1165	0/0:10,0:10:18.05:0,18,496	0/0:13,0:13:33.07:0,33,1001	0/0:8,0:8:15.05:0,15,528	1/1:5,2:7:12.04:620,12,0	0/1:10,4:14:87.73:783,0,88	0/0:15,0:16:33.11:0,33,1057	0/0:14,0:14:39.13:0,39,1271	0/0:15,0:15:39.13:0,39,1359	0/0:22,0:22:42.14:0,42,1383	1/1:4,0:4:9.03:416,9,0	0/0:18,0:18:42.12:0,42,1160	0/0:15,0:15:36.12:0,36,1244	0/0:20,0:20:43.22:0,43,1417	1/1:5,15:22:3.01:177,3,0	1/1:7,9:16:9.03:531,9,0	0/1:8,0:8:0:0,0,0	0/1:14,0:14:7.60:8,0,908	0/0:14,0:14:36.11:0,36,1096	0/0:13,0:13:36.12:0,36,1174	0/0:10,0:11:30.09:0,30,923
chr10	72001803	.	A	ATG	80.58	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=4.818;DP=460;FS=1.612;HRun=0;HaplotypeScore=85.6577;InbreedingCoeff=0.5523;MQ=55.08;MQ0=1;MQRankSum=-3.735;QD=2.69;ReadPosRankSum=1.391;VQSLOD=1.2829;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:8:2.60:10,3,0	0/0:5,0:5:15.05:0,15,214	0/0:27,0:20:47.94:0,48,666	0/0:17,0:14:19.85:0,20,283	0/0:19,0:19:48.16:0,48,683	0/0:17,0:17:30.10:0,30,428	0/0:26,0:26:45.14:0,45,623	0/0:27,0:27:75.20:0,75,1007	0/0:13,0:12:24.07:0,24,322	0/0:15,0:15:39.12:0,39,543	0/0:11,0:11:24.07:0,24,324	0/0:8,0:8:8.16:0,8,125	0/1:14,0:14:7.24:7,0,112	0/0:16,0:16:37.01:0,37,511	0/0:19,0:19:54.17:0,54,752	0/0:16,0:16:42.13:0,42,583	0/0:23,0:23:54.17:0,54,738	1/1:0,6:7:9.03:162,9,0	0/0:22,0:21:11.66:0,12,645	0/0:17,0:17:51.17:0,51,726	0/0:24,0:24:65.87:0,66,889	0/0:20,0:20:8.14:0,8,106	0/0:13,0:13:11.23:0,11,149	0/0:11,0:11:3.48:0,3,43	0/0:15,0:15:19.86:0,20,534	0/0:20,0:20:57.19:0,57,794	0/0:16,0:16:48.13:0,48,643	0/0:12,0:12:33.11:0,33,465
chr10	72005804	.	CT	C	913.08	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.374;DP=561;FS=3.521;HRun=4;HaplotypeScore=66.9292;InbreedingCoeff=0.7941;MQ=77.80;MQ0=0;MQRankSum=-2.416;QD=30.44;ReadPosRankSum=1.747;VQSLOD=4.1000;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,108,1495	0/0:10,0:10:30.10:0,30,420	0/0:16,0:16:48.15:0,48,647	0/0:14,1:15:0.21:0,0,391	0/0:16,0:16:42.13:0,42,572	0/0:26,0:26:69.23:0,69,966	0/0:24,0:24:72.22:0,72,990	0/0:18,0:18:42.13:0,42,574	0/0:18,0:18:48.15:0,48,655	0/0:25,0:25:75.25:0,75,1050	0/0:13,0:13:39.13:0,39,546	0/0:15,0:15:42.13:0,42,570	0/0:14,0:14:36.12:0,36,504	0/0:18,0:18:51.17:0,51,714	0/0:15,0:15:42.14:0,42,588	0/0:22,0:22:66.21:0,66,907	0/0:28,0:28:81.27:0,81,1134	1/1:1,29:30:84.26:1008,84,0	0/0:19,0:19:51.17:0,51,714	0/0:21,0:21:60.20:0,60,840	0/0:19,0:19:54.18:0,54,752	0/0:15,0:15:42.14:0,42,588	0/0:19,0:19:54.16:0,54,728	0/0:21,0:21:45.15:0,45,630	0/0:27,0:27:81.26:0,81,1118	0/0:20,0:20:57.19:0,57,798	0/0:24,0:24:72.22:0,72,978	0/0:13,0:13:36.12:0,36,504
chr10	72005872	.	A	AC	4897.97	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.909;DP=505;FS=0.380;HRun=0;HaplotypeScore=60.1433;InbreedingCoeff=0.9952;MQ=80.29;MQ0=0;MQRankSum=-2.242;QD=37.11;ReadPosRankSum=2.740;VQSLOD=4.8728;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:78.26:1108,78,0	0/0:6,0:6:18.05:0,18,236	0/0:24,0:23:66.06:0,66,775	0/0:10,0:10:14.86:0,15,242	0/0:26,0:26:75.23:0,75,999	0/0:21,0:21:60.14:0,60,766	0/0:14,0:14:42.09:0,42,533	0/0:18,0:18:54.17:0,54,724	0/0:18,0:18:54.17:0,54,733	0/0:15,0:15:45.14:0,45,608	0/0:18,0:18:51.16:0,51,681	1/1:0,11:11:27.09:381,27,0	1/1:0,15:15:39.13:540,39,0	0/0:14,0:14:42.09:0,42,527	0/0:18,0:18:54.16:0,54,722	0/0:14,0:14:42.14:0,42,584	0/0:19,0:19:57.18:0,57,771	1/1:4,23:27:75.12:990,75,0	0/0:20,0:22:45.72:0,46,686	0/0:19,0:19:57.19:0,57,792	0/0:16,0:16:48.11:0,48,616	1/1:0,19:19:54.18:769,54,0	1/1:0,11:11:33.11:475,33,0	1/1:1,18:19:45.15:634,45,0	0/0:20,0:20:60.19:0,60,820	0/0:24,0:24:75.19:0,75,988	0/0:24,0:24:69.13:0,69,856	0/0:12,0:12:36.12:0,36,499
chr10	72006201	.	A	ATTT	1256.89	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.718;DP=508;FS=0.710;HRun=10;HaplotypeScore=81.7234;InbreedingCoeff=0.9227;MQ=70.03;MQ0=0;MQRankSum=-0.458;QD=33.97;ReadPosRankSum=1.273;VQSLOD=3.2888;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:87.05:0,87,1026	0/0:5,0:5:15.05:0,15,182	0/0:9,0:9:21.06:0,21,246	0/0:13,0:12:11.08:0,11,119	0/0:27,0:28:78.16:0,78,929	0/0:21,0:21:51.12:0,51,617	0/0:17,0:17:19.63:0,20,452	0/0:29,0:29:60.06:0,60,719	0/0:16,0:16:33.02:0,33,401	0/0:17,0:17:48.14:0,48,583	0/0:19,0:19:51.12:0,51,620	0/0:15,0:15:41.91:0,42,485	0/0:12,0:12:27.02:0,27,315	0/0:10,0:10:24.03:0,24,288	0/0:19,0:19:51.11:0,51,608	0/0:11,0:11:21.04:0,21,255	0/0:24,0:24:60.15:0,60,730	1/1:8,27:37:75.23:1352,75,0	0/0:18,0:18:23.82:0,24,354	0/0:12,0:13:28.42:0,28,362	0/0:9,0:10:22.40:0,22,289	0/0:13,0:14:36.02:0,36,407	0/0:9,0:10:22.37:0,22,288	0/0:24,0:25:21.31:0,21,652	0/0:23,0:23:66.20:0,66,801	0/0:19,0:19:36.86:0,37,509	0/0:18,0:18:51.14:0,51,620	0/0:22,0:23:69.12:0,69,807
chr10	72008034	.	AT	A	1244.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.575;DP=747;FS=9.042;HRun=3;HaplotypeScore=82.7218;InbreedingCoeff=0.9808;MQ=80.54;MQ0=0;MQRankSum=-0.123;QD=31.90;ReadPosRankSum=3.573;VQSLOD=3.6122;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1632	0/0:10,0:10:30.10:0,30,431	0/0:19,0:19:51.16:0,51,711	0/0:21,0:21:60.15:0,60,802	0/0:14,0:14:39.09:0,39,538	0/0:25,0:25:75.25:0,75,1080	0/0:42,0:42:99:0,126,1812	0/0:24,0:24:72.23:0,72,1020	0/0:35,0:35:99:0,105,1472	0/0:33,0:33:93.30:0,93,1306	0/0:10,0:10:24.07:0,24,327	0/0:38,0:38:99:0,111,1599	0/0:22,0:22:66.22:0,66,950	0/0:31,0:31:90.30:0,90,1295	0/0:33,0:33:96.32:0,96,1382	0/0:29,0:29:78.26:0,78,1122	0/0:39,0:39:99:0,117,1681	1/1:2,37:39:99:1339,108,0	0/0:24,0:24:66.22:0,66,950	0/0:10,0:10:27.06:0,27,366	0/0:67,0:67:99:0,193,2743	0/0:24,0:24:66.14:0,66,903	0/0:19,0:19:54:0,54,667	0/0:31,0:31:90.28:0,90,1260	0/0:11,0:11:33.11:0,33,474	0/0:19,0:19:57.19:0,57,820	0/0:33,0:33:96.32:0,96,1380	0/0:5,0:5:15.05:0,15,216
chr10	72008959	.	T	TA	655.15	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.183;DP=443;FS=8.294;HRun=5;HaplotypeScore=44.0058;InbreedingCoeff=0.9681;MQ=74.96;MQ0=0;MQRankSum=-0.384;QD=28.48;ReadPosRankSum=2.083;VQSLOD=3.3520;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:28.89:0,29,377	0/0:6,0:6:18.05:0,18,193	0/0:10,0:10:27.07:0,27,290	0/0:6,0:6:15.03:0,15,160	0/0:9,0:9:27.07:0,27,290	0/0:12,0:12:33.08:0,33,355	0/0:17,0:17:48.12:0,48,516	0/0:18,0:18:42.08:0,42,437	0/0:19,0:19:48.12:0,48,515	0/0:22,0:22:60.15:0,60,645	0/0:20,0:20:48.11:0,48,508	0/0:15,0:15:45.11:0,45,484	0/0:16,0:16:48.10:0,48,507	0/0:15,0:15:42.10:0,42,451	0/0:17,0:17:48.12:0,48,516	0/0:8,0:8:24.06:0,24,258	0/0:28,0:28:81.20:0,81,871	1/1:1,22:23:57.19:750,57,0	0/0:22,0:22:60.13:0,60,637	0/0:20,0:20:51.13:0,51,548	0/0:10,0:10:30.08:0,30,322	0/0:9,0:9:27.07:0,27,290	0/0:14,0:14:42.11:0,42,451	0/0:13,0:13:33.08:0,33,354	0/0:10,0:10:24.06:0,24,258	0/0:20,0:20:57.14:0,57,612	0/0:36,0:36:99:0,102,1088	0/0:12,0:12:36.09:0,36,387
chr10	72009344	.	GTA	G	862.87	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.590;DP=1186;FS=1.562;HRun=0;HaplotypeScore=149.7004;InbreedingCoeff=0.9998;MQ=59.84;MQ0=16;MQRankSum=-1.111;QD=27.83;ReadPosRankSum=1.158;VQSLOD=4.9902;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,165,3027	0/0:12,0:12:36.08:0,36,624	0/0:80,0:35:71.41:0,71,1312	0/0:81,0:40:73.37:0,73,1262	0/0:34,0:34:92.57:0,93,1539	0/0:22,0:22:60.20:0,60,1145	0/0:38,0:38:99:0,102,1829	0/0:54,0:54:99:0,152,2345	0/0:46,0:46:99:0,129,2225	0/0:58,0:58:99:0,171,2857	0/0:20,0:20:51.16:0,51,950	0/0:50,0:50:99:0,144,2524	0/0:42,0:42:99:0,111,1950	0/0:32,0:32:96.06:0,96,1585	0/0:45,0:45:99:0,135,2379	0/0:35,0:35:99:0,105,1916	0/0:29,0:29:75.17:0,75,1329	1/1:1,30:30:61.78:958,62,0	0/0:27,0:27:75.20:0,75,1253	0/0:27,0:27:75.23:0,75,1376	0/0:140,0:140:99:0,384,6400	0/0:43,0:43:99:0,129,2331	0/0:30,0:30:90.23:0,90,1596	0/0:46,0:46:99:0,129,2284	0/0:21,0:21:60.15:0,60,1043	0/0:41,0:41:99:0,123,2270	0/0:25,0:25:75.20:0,75,1372	0/0:14,0:14:39.09:0,39,682
chr10	72011212	.	T	TACATC	1130.01	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.657;DP=660;FS=1.044;HRun=0;HaplotypeScore=126.3037;InbreedingCoeff=0.9978;MQ=90.63;MQ0=0;MQRankSum=-3.241;QD=70.63;ReadPosRankSum=0.036;VQSLOD=4.7247;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,3189	0/0:9,0:9:24.07:0,24,495	0/0:27,0:27:81.20:0,81,1524	0/0:25,0:25:62.51:0,63,1136	0/0:16,0:16:45.15:0,45,909	0/0:22,0:22:60.21:0,60,1336	0/0:24,0:24:66.21:0,66,1412	0/0:33,0:33:87.28:0,87,1837	0/0:28,0:28:75.22:0,75,1575	0/0:27,0:27:78.26:0,78,1685	0/0:19,0:19:54.19:0,54,1204	0/0:22,0:22:63.20:0,63,1317	0/0:18,0:18:54.19:0,54,1185	0/0:13,0:13:39.12:0,39,827	0/0:20,0:20:57.18:0,57,1229	0/0:23,0:23:69.24:0,69,1512	0/0:33,0:33:93.30:0,93,1996	1/1:3,12:16:39.13:1225,39,0	0/0:18,0:18:51.18:0,51,1138	0/0:30,0:30:87.29:0,87,1900	0/0:41,0:41:99:0,123,2599	0/0:16,0:16:48.16:0,48,1070	0/0:18,0:18:54.18:0,54,1164	0/0:28,0:28:81.23:0,81,1686	0/0:20,0:20:60.18:0,60,1254	0/0:25,0:25:75.26:0,75,1673	0/0:25,0:25:75.26:0,75,1630	0/0:14,0:14:39.10:0,39,784
chr10	72011400	.	CAA	C	707.81	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.378;DP=499;FS=1.692;HRun=10;HaplotypeScore=60.6171;InbreedingCoeff=0.9539;MQ=70.91;MQ0=2;MQRankSum=-0.459;QD=27.22;ReadPosRankSum=2.747;VQSLOD=3.8036;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:72.19:803,72,0	0/0:13,0:13:33.56:0,34,482	0/0:15,0:14:26.69:0,27,315	0/0:15,0:10:20.17:0,20,199	0/0:21,0:20:45.15:0,45,705	0/0:12,0:13:35.60:0,36,511	0/0:13,0:13:33.11:0,33,515	0/0:34,0:34:87.28:0,87,1324	0/0:13,0:13:36.10:0,36,547	0/0:23,0:23:63.20:0,63,979	0/0:19,0:19:45.15:0,45,695	0/0:18,0:18:50.62:0,51,743	0/0:10,0:10:27.08:0,27,408	0/0:16,0:16:45.08:0,45,658	0/0:18,0:18:51.16:0,51,768	0/0:16,0:16:45.15:0,45,714	0/0:24,0:24:60.19:0,60,925	0/0:0,0:13:29.94:0,30,103	0/0:28,0:28:73.49:0,73,1146	0/0:25,0:25:51.16:0,51,788	0/0:11,0:11:18.05:0,18,264	0/0:4,0:4:12.04:0,12,190	0/0:12,0:12:36.12:0,36,571	0/0:12,0:12:36.12:0,36,571	0/0:21,0:21:54.17:0,54,828	0/0:34,0:35:95.79:0,96,1441	0/0:18,0:18:54.17:0,54,832	0/0:12,0:12:27.09:0,27,429
chr10	72011588	.	T	TA	1168.56	PASS	AB=0.611;AC=13;AF=0.232;AN=56;BaseQRankSum=1.310;DP=510;FS=8.503;HRun=12;HaplotypeScore=60.0521;InbreedingCoeff=0.8416;MQ=72.06;MQ0=0;MQRankSum=-2.237;QD=10.82;ReadPosRankSum=4.128;VQSLOD=2.6351;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:74.91:400,75,0	0/0:5,0:5:5.91:0,6,44	0/0:19,0:13:15.34:0,15,79	0/0:11,0:8:6.52:0,7,35	0/0:27,1:28:29.67:0,30,369	0/0:26,1:28:41.44:0,41,458	0/0:16,0:16:31.35:0,31,221	0/0:16,0:19:47.14:0,47,329	0/0:14,0:14:32.77:0,33,241	0/0:27,0:27:52.65:0,53,378	0/0:24,2:26:27.43:0,27,362	0/1:4,7:11:16.23:177,0,16	1/1:3,11:14:15.02:146,15,0	0/0:11,0:11:32.81:0,33,241	0/0:13,0:14:31.85:0,32,225	0/0:17,1:17:15.51:0,16,275	0/0:23,0:24:49.74:0,50,356	1/1:15,0:15:10.39:33,10,0	0/0:29,1:30:36.20:0,36,419	0/0:25,0:25:53.52:0,54,388	0/0:15,0:16:34.84:0,35,246	1/1:2,8:10:15.02:146,15,0	1/1:0,9:11:23.87:219,24,0	1/1:4,13:17:24.04:234,24,0	0/0:19,0:19:28.83:0,29,211	0/0:22,0:23:55.70:0,56,399	0/0:19,0:19:34.19:0,34,345	0/0:9,0:9:14.88:0,15,109
chr10	72011597	.	A	AG	990.32	PASS	AB=0.839;AC=7;AF=0.125;AN=56;BaseQRankSum=2.769;DP=501;FS=5.711;HRun=0;HaplotypeScore=57.6045;InbreedingCoeff=0.6022;MQ=73.35;MQ0=0;MQRankSum=-0.583;QD=11.65;ReadPosRankSum=4.486;VQSLOD=3.7581;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:33:78.24:1026,78,0	0/0:5,0:5:15.01:0,15,160	0/0:21,0:14:15.38:0,15,161	0/0:13,0:10:15.81:0,16,148	0/0:23,0:23:61.84:0,62,809	0/0:25,0:25:70.86:0,71,960	0/0:16,0:16:46.35:0,46,551	0/0:25,0:25:72.13:0,72,847	0/0:14,0:14:42.11:0,42,537	0/0:30,0:30:81.13:0,81,974	0/0:23,0:23:58.98:0,59,819	0/0:12,0:12:8.79:0,9,141	0/1:12,0:12:2.98:3,0,20	0/0:13,0:13:36.11:0,36,486	0/0:14,0:14:39.07:0,39,489	0/0:19,0:19:49.83:0,50,662	0/0:24,0:24:69.07:0,69,831	0/1:1,0:15:0.76:63,0,1	0/0:27,0:27:77.49:0,77,992	0/0:23,0:23:69.19:0,69,881	0/0:14,0:14:42.05:0,42,528	0/0:10,0:10:5.44:0,5,82	0/1:11,0:11:6.26:6,0,8	1/1:14,0:14:7.09:18,7,0	0/0:15,0:15:45.02:0,45,511	0/0:24,0:24:72.12:0,72,904	0/0:19,0:19:57.15:0,57,753	0/0:7,0:7:18.05:0,18,234
chr10	72012458	.	GTT	G	1979.95	PASS	AB=0.762;AC=12;AF=0.214;AN=56;BaseQRankSum=2.685;DP=611;FS=4.250;HRun=12;HaplotypeScore=91.5902;InbreedingCoeff=0.7823;MQ=74.10;MQ0=1;MQRankSum=0.627;QD=13.56;ReadPosRankSum=2.559;VQSLOD=2.7600;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:7,2:28:8.87:9,0,148	0/0:2,0:3:6:0,6,55	0/0:23,0:19:37.71:0,38,372	0/1:18,1:15:12.63:13,0,130	0/0:18,0:19:50.64:0,51,699	0/0:20,0:23:56.65:0,57,728	0/0:19,0:19:54.05:0,54,726	0/0:36,0:41:86.18:0,86,1129	0/0:10,0:11:30.09:0,30,417	0/0:4,0:19:46.61:0,47,442	0/0:2,0:10:24.01:0,24,239	1/1:1,21:22:51.10:519,51,0	1/1:2,19:21:51.03:518,51,0	0/0:12,0:12:24.08:0,24,351	0/0:20,0:22:56.15:0,56,757	0/0:26,0:28:68.17:0,68,914	0/0:5,0:42:90.11:0,90,881	0/0:30,0:31:90.29:0,90,1298	0/0:31,0:32:86.95:0,87,1168	0/0:28,0:28:71.71:0,72,997	0/0:11,0:14:32.08:0,32,420	1/1:4,11:16:26.37:252,26,0	1/1:4,25:29:62.41:635,62,0	1/1:2,8:10:21.04:214,21,0	0/0:6,0:22:42.04:0,42,409	0/0:26,0:29:72.92:0,73,929	0/0:21,0:24:65.66:0,66,907	0/0:11,0:12:24.08:0,24,340
chr10	72012705	.	G	GT	558.71	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=4.608;DP=640;FS=2.604;HRun=4;HaplotypeScore=76.9369;InbreedingCoeff=0.6464;MQ=75.02;MQ0=5;MQRankSum=1.412;QD=8.60;ReadPosRankSum=0.620;VQSLOD=0.3458;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:47,0:47:27.13:214,0,27	0/0:13,0:13:27.07:0,27,304	0/0:62,0:42:89.97:0,90,814	0/0:45,0:30:23.18:0,23,390	0/0:28,0:28:56.10:0,56,673	0/0:17,0:17:48.12:0,48,535	0/0:18,0:18:51.10:0,51,543	0/0:23,0:23:66.10:0,66,701	0/0:17,0:17:48.04:0,48,499	0/0:17,0:17:42.09:0,42,449	0/0:18,0:18:54.14:0,54,603	0/0:24,0:24:60.15:0,60,663	0/0:14,0:14:36.07:0,36,389	0/0:14,0:14:36.08:0,36,391	0/0:24,0:24:69.19:0,69,774	0/0:21,0:21:57.15:0,57,636	0/0:24,0:24:69.16:0,69,759	1/1:1,17:18:33.11:451,33,0	0/0:23,0:23:54.14:0,54,604	0/0:19,0:19:51.13:0,51,567	0/0:25,0:25:72.18:0,72,796	0/0:16,0:16:36.08:0,36,398	0/0:17,0:17:42.10:0,42,464	0/0:17,0:17:48.12:0,48,534	0/0:21,0:21:51.10:0,51,549	0/0:27,0:27:69.10:0,69,739	0/0:21,0:21:60.16:0,60,669	0/0:10,0:10:30.04:0,30,316
chr10	72012709	.	T	TG	1193.35	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.596;DP=635;FS=2.567;HRun=8;HaplotypeScore=75.3089;InbreedingCoeff=0.9977;MQ=76.81;MQ0=5;MQRankSum=0.596;QD=18.36;ReadPosRankSum=0.421;VQSLOD=3.6062;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,42:48:77.86:1150,78,0	0/0:11,0:11:32.88:0,33,286	0/0:61,1:44:44.04:0,44,492	0/0:43,0:30:31.48:0,31,308	0/0:22,1:23:28.37:0,28,506	0/0:17,0:17:48.02:0,48,436	0/0:19,0:19:42:0,42,378	0/0:25,0:25:57:0,57,518	0/0:18,0:18:38.99:0,39,347	0/0:19,0:19:38.99:0,39,349	0/0:18,0:18:51.03:0,51,466	0/0:26,0:26:68.85:0,69,602	0/0:16,0:16:41.92:0,42,363	0/0:13,0:13:33.02:0,33,302	0/0:26,0:26:74.94:0,75,668	0/0:20,0:20:56.92:0,57,507	0/0:23,0:23:66.02:0,66,598	1/1:17,0:17:31.59:165,32,0	0/0:22,0:22:56.99:0,57,511	0/0:20,0:20:53.87:0,54,471	0/0:26,0:26:71.98:0,72,646	0/0:15,0:15:41.95:0,42,368	0/0:16,0:16:41.70:0,42,367	0/0:16,0:16:45.02:0,45,412	0/0:18,0:18:44.99:0,45,406	0/0:24,0:24:63:0,63,573	0/0:21,0:21:57.02:0,57,521	0/0:10,0:10:24:0,24,220
chr10	72013557	.	TCACACA	T	715.16	PASS	AC=10;AF=0.208;AN=48;BaseQRankSum=-0.162;DP=426;FS=16.279;HRun=0;HaplotypeScore=113.6082;InbreedingCoeff=0.7840;MQ=39.82;MQ0=61;MQRankSum=1.440;QD=6.94;ReadPosRankSum=0.134;VQSLOD=1.4313;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,1:19:8.05:113,8,0	0/0:8,0:6:3.01:0,3,75	./.	./.	0/0:11,0:11:20.94:0,21,370	0/0:16,0:11:5.99:0,6,97	0/0:17,0:15:12.02:0,12,226	0/0:14,0:11:5.98:0,6,77	0/0:20,0:17:17.98:0,18,384	0/0:15,0:12:27.05:0,27,620	0/0:11,0:10:12.04:0,12,294	1/1:18,0:16:12:190,12,0	1/1:14,0:13:9.03:178,9,0	0/0:26,1:22:14.80:0,15,343	0/0:20,0:19:21.06:0,21,331	0/0:25,0:22:27.45:0,27,500	0/0:17,0:13:18.06:0,18,470	0/0:16,0:14:28.12:0,28,599	0/0:13,0:11:15.02:0,15,332	./.	0/0:13,0:10:0:0,0,0	./.	1/1:14,0:14:9.03:159,9,0	1/1:28,0:21:15.01:225,15,0	0/0:12,0:11:12.04:0,12,276	0/0:21,0:18:38.88:0,39,785	0/0:13,0:13:12.04:0,12,281	0/0:10,0:6:14.82:0,15,295
chr10	72016403	.	GCA	G	591.37	PASS	AB=0.903;AC=25;AF=0.500;AN=50;BaseQRankSum=3.431;DP=716;FS=3.569;HRun=0;HaplotypeScore=96.6831;InbreedingCoeff=0.1311;MQ=64.24;MQ0=22;MQRankSum=1.005;QD=1.54;ReadPosRankSum=-0.630;VQSLOD=1.8398;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:4.42:0,4,324	1/1:10,0:14:5.68:28,6,0	0/0:61,0:18:0:0,0,0	./.	0/1:15,2:17:23.38:23,0,67	0/1:16,2:20:52.25:52,0,212	0/1:27,2:29:45.24:45,0,153	0/0:25,0:25:9.03:0,9,110	0/0:15,0:16:12.02:0,12,140	1/1:16,0:19:3.27:14,3,0	./.	0/0:15,0:15:18.01:0,18,187	0/1:24,2:27:99:120,0,216	0/0:22,0:22:27.09:0,27,381	0/1:28,2:30:2.32:2,0,326	0/1:20,0:22:4.22:4,0,240	1/1:15,0:23:8.52:42,9,0	1/1:18,0:18:2.67:13,3,0	./.	1/1:13,2:16:5.96:52,6,0	0/1:63,13:77:2.63:148,0,3	0/1:11,1:14:20.39:20,0,66	0/1:8,1:9:23.39:23,0,62	0/0:24,0:35:30.03:0,30,337	0/0:13,0:15:2.99:0,3,23	1/1:20,0:21:5.08:33,5,0	1/1:13,3:16:8.85:79,9,0	1/1:7,0:7:5.85:47,6,0
chr10	72017158	.	ATCTCTCTCTCTCTCTCTCTCTCTC	A	1632.20	PASS	AB=0.909;AC=10;AF=0.179;AN=56;BaseQRankSum=1.386;DP=535;FS=0.823;HRun=0;HaplotypeScore=276.9201;InbreedingCoeff=0.2165;MQ=68.04;MQ0=11;MQRankSum=-0.208;QD=14.32;ReadPosRankSum=2.371;VQSLOD=2.3299;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:15:15.39:94,0,15	1/1:10,1:11:18.06:557,18,0	0/0:19,0:15:10.27:0,10,120	0/0:38,0:26:12.68:0,13,177	0/0:19,0:19:6.01:0,6,115	0/0:26,0:26:12.04:0,12,585	0/0:18,0:18:12.04:0,12,282	0/0:54,0:52:42.09:0,42,686	0/0:15,0:15:12.04:0,12,186	0/1:22,0:22:99:234,0,355	0/1:9,0:9:15.68:203,0,16	0/0:8,0:7:3.01:0,3,46	0/0:16,0:15:24.07:0,24,1376	0/1:11,0:11:0:0,0,0	0/0:15,0:15:6.02:0,6,184	0/0:7,0:7:12.04:0,12,405	0/1:9,10:19:99:179,0,120	0/1:6,0:8:14.78:302,0,15	0/0:19,0:18:12.04:0,12,621	0/0:23,0:23:11.24:0,11,353	0/0:32,0:31:17.59:0,18,332	0/0:14,0:14:6.02:0,6,155	0/0:18,0:17:3.01:0,3,37	0/0:23,0:22:27.05:0,27,651	1/1:18,0:17:11.83:207,12,0	0/0:29,0:28:63.21:0,63,1758	0/0:15,0:15:39.13:0,39,1726	0/0:10,0:9:3.01:0,3,325
chr10	72017230	.	TTC	T	1954.88	PASS	AB=0.650;AC=6;AF=0.107;AN=56;BaseQRankSum=2.029;DP=733;FS=12.279;HRun=0;HaplotypeScore=208.8726;InbreedingCoeff=0.2499;MQ=63.88;MQ0=22;MQRankSum=2.872;QD=17.93;ReadPosRankSum=2.302;VQSLOD=2.8630;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:36.12:0,36,601	0/0:17,0:16:33.08:0,33,533	0/0:66,0:29:29.97:0,30,379	0/0:96,0:39:36.21:0,36,471	0/0:32,0:31:75.17:0,75,1180	0/0:23,0:23:44.22:0,44,743	0/0:23,0:23:66.21:0,66,1081	0/0:40,0:37:90.27:0,90,1472	0/0:25,0:24:56.93:0,57,919	0/0:26,0:26:75.16:0,75,1220	0/0:22,0:22:41.38:0,41,746	0/1:5,6:10:99:191,0,107	0/1:8,13:20:99:488,0,166	0/0:15,0:14:30.10:0,30,499	0/0:22,0:22:51.17:0,51,844	0/0:18,0:17:42.61:0,43,712	0/0:14,0:14:30.03:0,30,463	0/0:15,0:15:37.68:0,38,620	0/0:22,0:21:57.18:0,57,919	0/0:22,0:21:54.05:0,54,861	0/0:14,0:12:27.09:0,27,452	0/1:17,17:34:99:629,0,409	0/1:15,15:30:99:451,0,535	1/1:2,11:13:26.76:327,27,0	0/0:27,0:26:64.46:0,64,1036	0/0:26,0:26:71.81:0,72,1095	0/0:33,0:33:78.12:0,78,1263	0/0:8,0:6:15.05:0,15,240
chr10	72017250	.	T	TTC	3136.46	PASS	AB=0.994;AC=26;AF=0.464;AN=56;BaseQRankSum=7.484;DP=731;FS=4.997;HRun=0;HaplotypeScore=214.5521;InbreedingCoeff=0.8250;MQ=49.74;MQ0=16;MQRankSum=-1.963;QD=8.76;ReadPosRankSum=0.866;VQSLOD=3.2742;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:36.12:588,36,0	1/1:15,0:14:15.05:227,15,0	0/0:66,0:19:14.74:0,15,220	0/1:78,0:24:6.24:6,0,103	0/0:35,0:34:30.10:0,30,379	0/0:22,0:20:33.99:0,34,422	0/0:21,0:20:31.88:0,32,363	0/0:50,0:44:36.05:0,36,757	0/0:24,0:24:38.22:0,38,480	1/1:26,0:26:23.45:349,23,0	1/1:24,0:24:14.67:199,15,0	1/1:12,0:11:10.78:85,11,0	1/1:19,0:19:6.08:157,6,0	0/0:14,0:14:24.07:0,24,304	0/0:19,0:19:39.04:0,39,447	0/0:18,0:16:23.42:0,23,365	1/1:12,1:13:15.52:198,16,0	1/1:4,10:14:30.10:490,30,0	0/0:24,0:22:21.85:0,22,518	0/0:22,0:21:26.87:0,27,342	0/0:13,0:11:27.04:0,27,324	1/1:38,0:38:9.55:234,10,0	1/1:33,0:33:30.08:193,30,0	1/1:14,0:14:14.38:122,14,0	1/1:26,1:26:31.34:470,31,0	0/1:27,0:27:38.33:38,0,489	0/0:37,0:36:69.06:0,69,827	0/0:8,0:8:12.02:0,12,136
chr10	72017256	.	C	CAT	903.02	PASS	AB=0.906;AC=10;AF=0.179;AN=56;BaseQRankSum=8.935;DP=729;FS=47.174;HRun=0;HaplotypeScore=207.7752;InbreedingCoeff=0.0327;MQ=49.25;MQ0=19;MQRankSum=-5.889;QD=4.99;ReadPosRankSum=-1.966;VQSLOD=1.3469;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:23.87:112,24,0	0/1:14,0:13:18.95:19,0,95	0/0:64,0:18:21.55:0,22,444	0/0:78,0:22:21.46:0,21,402	0/0:35,0:34:32.77:0,33,552	0/0:22,0:20:38.69:0,39,612	0/0:20,0:19:41.80:0,42,599	0/0:52,0:44:99:0,117,1704	0/0:22,0:22:44.28:0,44,712	0/0:28,0:28:50.91:0,51,758	0/0:25,0:25:9.10:0,9,134	0/1:9,3:11:99:140,0,118	0/1:14,4:18:99:164,0,315	0/0:14,0:14:26.60:0,27,437	0/0:18,0:18:39.13:0,39,635	0/0:19,0:17:37.15:0,37,557	0/1:11,0:11:4.87:5,0,47	0/1:13,0:13:12.88:13,0,50	0/0:25,0:22:63.20:0,63,973	0/0:24,0:23:38.64:0,39,595	0/0:13,0:11:26.60:0,27,439	0/1:32,6:38:99:328,0,546	0/1:23,10:33:99:242,0,349	0/0:12,0:12:17.85:0,18,189	0/1:25,0:24:27.65:28,0,61	0/0:27,0:27:73.95:0,74,1007	0/0:37,0:36:89.51:0,90,1332	0/0:12,0:12:28.79:0,29,363
chr10	72017261	.	T	TC	729.82	PASS	AB=0.920;AC=15;AF=0.268;AN=56;BaseQRankSum=7.231;DP=690;FS=0.980;HRun=1;HaplotypeScore=182.1914;InbreedingCoeff=0.2912;MQ=49.65;MQ0=19;MQRankSum=0.670;QD=3.20;ReadPosRankSum=1.614;VQSLOD=0.0910;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:27.43:114,27,0	0/1:10,3:12:18.87:78,0,19	0/0:61,0:17:13.74:0,14,344	0/0:72,0:18:31.59:0,32,256	0/0:34,0:33:32.70:0,33,431	0/0:22,0:20:36.08:0,36,482	0/0:19,0:18:37.77:0,38,432	0/0:51,0:41:99:0,104,1293	0/0:21,0:21:42.09:0,42,550	0/1:23,3:26:50.01:50,0,223	0/1:19,3:22:16.37:58,0,16	0/1:12,0:11:13.05:23,0,13	0/1:16,0:16:2.29:2,0,108	0/0:13,0:13:23.83:0,24,329	0/0:18,0:18:44.97:0,45,525	0/0:19,0:17:34.85:0,35,456	0/1:7,1:8:8.60:85,0,9	1/1:10,0:10:22.99:101,23,0	0/0:24,0:21:55.63:0,56,694	0/0:22,0:21:29.89:0,30,386	0/0:12,0:10:27.05:0,27,352	0/1:37,0:37:22.13:148,0,22	1/1:31,0:31:8.24:74,8,0	0/1:12,0:12:4.56:14,0,5	0/1:18,6:23:1.50:152,0,1	0/0:26,0:26:66.40:0,66,784	0/0:36,0:35:87.05:0,87,1030	0/0:12,0:12:26.11:0,26,240
chr10	72017278	.	CAT	C	834.10	PASS	AB=0.810;AC=13;AF=0.232;AN=56;BaseQRankSum=4.175;DP=479;FS=9.851;HRun=0;HaplotypeScore=131.6389;InbreedingCoeff=-0.2965;MQ=61.98;MQ0=14;MQRankSum=-4.431;QD=3.55;ReadPosRankSum=-3.442;VQSLOD=1.0046;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:32.99:0,33,576	0/1:4,2:5:51.01:51,0,89	0/0:40,2:14:7.83:0,8,265	0/1:47,2:17:28.33:28,0,181	0/0:11,2:13:24.08:0,24,466	0/0:14,1:14:31.31:0,31,536	0/1:16,1:16:22.46:22,0,480	0/1:34,4:32:99:154,0,1207	0/0:13,1:14:25.66:0,26,486	0/1:8,9:17:26.25:349,0,26	0/1:5,6:11:40.38:40,0,93	0/0:7,3:8:12.04:0,12,174	0/1:7,4:11:31.03:31,0,186	0/0:7,0:7:18.06:0,18,365	0/0:12,1:13:30.10:0,30,600	0/1:10,6:14:7.06:7,0,362	0/0:3,3:6:5.66:0,6,34	0/0:10,0:10:27.09:0,27,451	0/1:16,0:13:1.66:2,0,597	0/0:9,3:11:21.54:0,22,418	0/1:7,0:6:10.19:10,0,204	0/0:21,9:30:20.74:0,21,804	0/0:14,9:23:31.57:0,32,462	0/0:8,0:8:15.05:0,15,228	0/1:9,7:15:99:126,0,124	0/1:16,4:20:95.96:96,0,668	0/0:26,3:28:26.55:0,27,934	0/1:5,4:9:65.22:65,0,129
chr10	72017288	.	CAT	C	139.09	PASS	AB=0.840;AC=5;AF=0.089;AN=56;BaseQRankSum=4.304;DP=334;FS=16.318;HRun=0;HaplotypeScore=98.9663;InbreedingCoeff=-0.1250;MQ=70.40;MQ0=10;MQRankSum=-3.253;QD=1.96;ReadPosRankSum=1.305;VQSLOD=0.8247;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:21.07:0,21,414	0/0:4,0:4:6.45:0,6,176	0/0:28,0:11:19.09:0,19,199	0/0:35,1:15:15.34:0,15,254	0/0:8,1:9:18.06:0,18,364	0/0:9,0:8:21.07:0,21,424	0/0:11,1:11:23.28:0,23,376	0/1:28,1:23:6.87:7,0,983	0/0:9,1:10:24.08:0,24,484	0/1:4,5:9:99:172,0,112	0/0:3,3:6:10.75:0,11,185	0/0:6,3:7:5.73:0,6,121	0/0:9,1:10:17.97:0,18,275	0/0:7,0:7:18.06:0,18,325	0/0:9,0:9:27.07:0,27,466	0/0:9,3:11:3.39:0,3,350	0/0:4,1:5:6.01:0,6,77	0/0:5,0:5:15.05:0,15,290	0/1:9,0:8:15.46:15,0,369	0/0:5,1:5:15.05:0,15,300	0/0:5,0:5:14.59:0,15,188	0/0:18,6:25:14.31:0,14,861	0/0:13,3:16:24.96:0,25,485	0/0:5,0:5:11.87:0,12,196	0/1:7,2:10:9.51:10,0,313	0/1:11,3:14:44.01:44,0,577	0/0:21,2:22:15.48:0,15,820	0/0:2,0:2:6.02:0,6,106
chr10	72017808	.	AAAAAAAGAAAAAAG	A	1775.46	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=5.516;DP=587;FS=34.860;HRun=0;HaplotypeScore=220.8626;InbreedingCoeff=0.8914;MQ=60.79;MQ0=1;MQRankSum=-6.106;QD=22.19;ReadPosRankSum=2.137;VQSLOD=1.5318;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:31.39:0,31,1583	0/0:5,0:5:15.05:0,15,768	0/0:19,0:10:8.01:0,8,149	./.	0/0:29,0:29:48.16:0,48,2285	0/0:25,0:25:51.17:0,51,3128	0/0:17,0:17:36.12:0,36,1827	0/0:30,0:30:35.40:0,35,1237	0/0:25,0:25:36.12:0,36,1855	0/0:34,0:34:60.21:0,60,2502	0/0:27,0:27:60.20:0,60,2004	1/1:7,8:15:9.03:349,9,0	1/1:5,5:10:12.04:466,12,0	0/0:10,0:10:18.06:0,18,748	0/0:26,0:26:48.15:0,48,2143	0/0:31,0:31:70.47:0,70,3977	0/0:32,0:31:48.10:0,48,1379	0/0:15,0:15:13.86:0,14,525	0/0:23,0:23:36.12:0,36,1617	0/0:23,0:23:48.16:0,48,2811	0/0:14,0:14:18.06:0,18,1001	1/1:11,6:17:9.03:342,9,0	1/1:7,12:19:17.97:590,18,0	1/1:12,7:19:6.02:185,6,0	0/0:19,0:19:15.05:0,15,339	0/0:29,0:29:60.20:0,60,3105	0/0:32,0:32:60.21:0,60,3565	0/0:3,0:3:9.03:0,9,599
chr10	72017836	.	GA	G	1406.12	PASS	AB=0.837;AC=14;AF=0.250;AN=56;BaseQRankSum=8.774;DP=542;FS=0.462;HRun=6;HaplotypeScore=75.0640;InbreedingCoeff=-0.1924;MQ=56.33;MQ0=7;MQRankSum=-4.701;QD=5.39;ReadPosRankSum=1.032;VQSLOD=-0.4212;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,9:23:99:319,0,212	0/1:4,4:8:99:105,0,108	0/1:27,0:8:10.84:11,0,134	0/1:29,0:12:14.91:15,0,64	0/0:25,0:25:66.15:0,66,846	0/0:25,0:25:72.22:0,72,934	0/0:21,0:21:57.17:0,57,734	0/0:34,0:34:90.28:0,90,1169	0/0:15,0:15:45.13:0,45,569	0/1:14,15:29:99:390,0,356	0/1:14,11:25:99:266,0,191	1/1:8,0:8:3.74:10,4,0	0/1:6,0:6:5.11:5,0,31	0/0:7,0:7:21.05:0,21,260	0/0:15,0:15:42.08:0,42,505	0/0:29,0:29:81.72:0,82,1051	0/1:15,14:29:99:264,0,243	0/1:8,4:13:59.90:105,0,60	0/0:26,0:24:60.06:0,60,736	0/0:19,0:19:57.19:0,57,750	0/0:9,0:9:27.07:0,27,339	0/0:7,0:7:3.51:0,4,76	0/1:17,0:17:22.36:22,0,220	0/0:14,0:14:15.80:0,16,190	0/1:19,0:19:25.91:26,0,33	0/1:23,3:26:21.47:21,0,793	0/0:25,0:25:72.23:0,72,947	0/0:10,0:10:30.06:0,30,365
chr10	72017837	.	A	AAAAAAGAAAAAAGAAAAAAG	5098.33	PASS	AB=0.977;AC=17;AF=0.304;AN=56;BaseQRankSum=6.688;DP=547;FS=0.000;HRun=0;HaplotypeScore=259.5676;InbreedingCoeff=0.5236;MQ=56.32;MQ0=7;MQRankSum=-6.950;QD=20.15;ReadPosRankSum=-0.800;VQSLOD=3.4365;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:23:99:359,0,130	1/1:8,0:8:24.07:641,24,0	0/1:28,0:9:9.51:10,0,106	0/1:31,0:13:13.32:13,0,53	0/0:25,0:25:58.45:0,58,1428	0/0:25,0:25:72.23:0,72,2437	0/0:21,0:21:50.74:0,51,1249	0/0:35,0:35:84.23:0,84,1035	0/0:15,0:15:36.12:0,36,1109	1/1:30,0:30:78.22:1447,78,0	1/1:23,0:23:54.16:1075,54,0	0/0:8,0:8:8.92:0,9,244	0/0:6,0:6:15.05:0,15,502	0/0:7,0:7:18.04:0,18,449	0/0:15,0:15:30.10:0,30,1176	0/0:29,0:29:77.14:0,77,2870	1/1:30,0:29:48.59:713,49,0	1/1:13,0:13:11.55:527,12,0	0/0:25,0:23:43.50:0,43,1102	0/0:19,0:19:54.18:0,54,1744	0/0:9,0:9:24.05:0,24,600	0/0:7,0:7:15.05:0,15,405	0/1:18,0:18:4.39:4,0,509	0/0:14,0:14:1.45:0,1,251	1/1:4,15:22:3.01:282,3,0	0/1:26,0:26:27.49:27,0,1774	0/0:24,0:24:72.18:0,72,2187	0/0:10,0:10:30.06:0,30,667
chr10	72017843	.	G	GA	656.86	PASS	AB=0.817;AC=5;AF=0.089;AN=56;BaseQRankSum=5.917;DP=555;FS=12.641;HRun=6;HaplotypeScore=83.8080;InbreedingCoeff=-0.1152;MQ=57.68;MQ0=8;MQRankSum=-5.497;QD=6.38;ReadPosRankSum=-1.207;VQSLOD=-0.2004;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:47.83:0,48,514	0/1:4,4:8:79.18:121,0,79	0/0:32,0:12:4.61:0,5,119	0/0:30,0:15:17.79:0,18,191	0/0:25,0:25:61.36:0,61,655	0/0:25,0:25:72.18:0,72,773	0/0:20,0:20:54.13:0,54,580	0/0:35,0:35:90.22:0,90,966	0/0:15,0:15:39.08:0,39,411	0/1:21,8:29:99:304,0,379	0/1:17,6:23:99:219,0,289	0/0:8,0:8:8.43:0,8,39	0/0:8,0:8:17.38:0,17,118	0/0:7,0:7:18.04:0,18,193	0/0:14,0:14:39.10:0,39,418	0/0:28,0:28:81.20:0,81,870	0/1:25,3:27:99:117,0,372	0/1:14,1:15:9.85:10,0,221	0/0:27,0:25:66.13:0,66,698	0/0:21,0:21:60.15:0,60,644	0/0:11,0:11:30.06:0,30,313	0/0:8,0:8:17.67:0,18,144	0/0:21,0:21:7.32:0,7,319	0/0:14,0:14:23.23:0,23,217	0/0:18,0:18:4.25:0,4,35	0/0:26,0:26:75.16:0,75,790	0/0:24,0:24:72.13:0,72,754	0/0:11,0:11:33.03:0,33,340
chr10	72018259	.	A	ATGTGTG	6693.89	PASS	AB=0.962;AC=24;AF=0.444;AN=54;BaseQRankSum=1.404;DP=266;FS=13.758;HRun=0;HaplotypeScore=68.0161;InbreedingCoeff=0.7648;MQ=61.02;MQ0=1;MQRankSum=-10.922;QD=53.98;ReadPosRankSum=0.305;VQSLOD=3.8749;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,7:14:18.06:618,18,0	1/1:2,3:5:9.03:309,9,0	0/0:3,0:3:6.02:0,6,128	0/1:10,0:7:24.26:24,0,162	0/0:10,0:10:27.09:0,27,587	0/0:3,0:3:9.01:0,9,159	0/0:8,0:8:24.08:0,24,538	0/0:22,0:22:54.18:0,54,1157	0/0:7,0:7:21.07:0,21,472	1/1:3,2:5:9.03:279,9,0	1/1:4,9:13:27.09:925,27,0	1/1:5,5:10:15.05:515,15,0	1/1:1,4:5:12.04:412,12,0	0/0:14,0:14:36.12:0,36,807	0/0:8,0:8:21.07:0,21,472	0/0:11,0:11:27.09:0,27,603	1/1:5,11:16:30.10:1030,30,0	1/1:3,10:13:30.10:1031,30,0	0/0:13,0:13:30.10:0,30,674	0/0:10,0:10:30.10:0,30,674	0/0:6,0:6:18.06:0,18,404	./.	1/1:1,1:2:3.01:103,3,0	1/1:1,2:6:9.03:245,9,0	1/1:3,10:13:33.11:1131,33,0	0/1:11,1:12:72.96:73,0,548	0/0:12,0:12:36.12:0,36,809	0/0:15,0:15:39.09:0,39,747
chr10	72018289	.	T	TAC	1376.75	PASS	AC=14;AF=0.280;AN=50;BaseQRankSum=6.976;DP=197;FS=28.523;HRun=0;HaplotypeScore=65.8837;InbreedingCoeff=0.7545;MQ=54.98;MQ0=1;MQRankSum=-8.197;QD=24.15;ReadPosRankSum=1.640;VQSLOD=1.8007;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,4:9:18.06:257,18,0	1/1:4,1:5:12.03:138,12,0	./.	./.	0/0:8,0:8:18.06:0,18,223	./.	0/0:4,0:4:6.02:0,6,75	0/0:23,0:23:48.13:0,48,569	0/0:6,0:6:12.02:0,12,136	1/1:3,0:3:6.02:65,6,0	1/1:4,2:6:9.03:126,9,0	0/0:1,0:7:12.26:0,12,51	0/0:2,0:3:2.84:0,3,14	0/0:6,0:6:6.02:0,6,74	0/0:4,0:4:6.02:0,6,75	0/0:9,0:9:14.07:0,14,191	1/1:6,2:8:15.03:168,15,0	1/1:8,4:12:27.03:373,27,0	0/0:8,0:8:21.05:0,21,244	0/0:7,0:7:14.94:0,15,187	0/0:5,0:5:6:0,6,61	0/0:0,0:2:4.40:0,4,18	0/0:1,0:2:2.84:0,3,14	0/0:0,0:4:3.73:0,4,16	1/1:9,5:14:33.09:422,33,0	0/0:6,0:6:18.06:0,18,220	0/0:11,0:11:23.43:0,23,252	0/0:13,0:13:36.05:0,36,385
chr10	72018301	.	CATAAATATAT	C	2671.43	PASS	AB=0.846;AC=22;AF=0.407;AN=54;BaseQRankSum=8.854;DP=184;FS=55.367;HRun=0;HaplotypeScore=77.6608;InbreedingCoeff=0.6668;MQ=60.31;MQ0=1;MQRankSum=-8.630;QD=38.72;ReadPosRankSum=3.753;VQSLOD=1.0390;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,2:8:16.67:240,17,0	1/1:2,4:6:11.71:305,12,0	./.	0/0:8,0:3:6.02:0,6,97	0/0:6,0:6:18:0,18,419	0/0:2,0:2:6.02:0,6,226	0/0:2,0:2:6:0,6,54	0/0:27,0:27:69.14:0,69,1878	0/0:4,0:4:9:0,9,207	1/1:2,2:4:12.04:319,12,0	1/1:4,1:5:8.37:120,8,0	1/1:6,0:6:3.58:186,4,0	1/1:1,0:1:3.01:66,3,0	0/0:4,0:4:9:0,9,147	0/0:4,0:4:9.02:0,9,110	0/0:7,0:7:20.70:0,21,488	0/1:5,4:9:2.10:386,0,2	1/1:6,4:10:3.10:338,3,0	0/0:8,0:8:24.04:0,24,620	0/0:6,0:6:15.48:0,15,225	0/0:3,0:3:3:0,3,27	1/1:2,0:3:6.02:128,6,0	1/1:2,0:2:3.01:65,3,0	0/1:4,0:4:2.29:59,0,2	1/1:5,6:11:31.45:643,31,0	0/0:6,0:6:18.03:0,18,367	0/0:9,0:9:24.04:0,24,548	0/0:14,0:14:39.08:0,39,1310
chr10	72018305	.	A	AAT	708.08	PASS	AB=0.794;AC=15;AF=0.300;AN=50;BaseQRankSum=-5.790;DP=171;FS=27.480;HRun=0;HaplotypeScore=56.8372;InbreedingCoeff=0.3528;MQ=58.12;MQ0=0;MQRankSum=3.904;QD=9.32;ReadPosRankSum=-0.617;VQSLOD=1.5146;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:8:3.31:0,3,15	0/0:5,0:5:8.52:0,9,42	0/1:3,0:2:0:0,0,0	0/0:8,0:3:4.09:0,4,17	0/0:6,0:6:6.02:0,6,69	0/0:2,0:2:5.98:0,6,54	./.	0/1:18,7:25:66.23:140,0,66	0/0:2,0:2:3.01:0,3,34	0/0:2,0:6:8.90:0,9,41	0/0:4,0:4:2.39:0,2,13	0/0:3,0:6:8.52:0,9,42	0/0:0,0:1:2.60:0,3,10	1/1:1,0:1:3.01:46,3,0	1/1:3,0:3:3.01:38,3,0	1/1:3,2:5:6.02:93,6,0	0/0:8,0:8:11.36:0,11,56	0/0:10,0:10:7.72:0,8,34	1/1:7,1:8:6.02:89,6,0	./.	./.	0/0:1,0:3:2.57:0,3,13	0/0:2,0:2:2.84:0,3,14	0/0:3,0:4:2.84:0,3,14	0/0:11,0:11:17.04:0,17,83	1/1:5,0:5:2.99:23,3,0	1/1:5,3:8:9.03:139,9,0	0/1:6,9:18:10.27:280,0,10
chr10	72018437	.	T	TG	540.51	PASS	AB=1.000;AC=19;AF=0.365;AN=52;BaseQRankSum=0.675;DP=306;FS=8.455;HRun=1;HaplotypeScore=33.7915;InbreedingCoeff=0.7591;MQ=60.17;MQ0=25;MQRankSum=-0.419;QD=6.93;ReadPosRankSum=-0.587;VQSLOD=-0.1242;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:6:8.89:59,9,0	1/1:3,0:3:8.94:65,9,0	0/0:44,0:12:19.69:0,20,199	0/0:27,0:17:15.36:0,15,264	0/0:16,0:15:38.32:0,38,247	0/0:8,0:7:14.71:0,15,89	0/0:8,0:8:17.86:0,18,131	0/0:25,0:25:58.26:0,58,488	0/0:12,0:10:20.68:0,21,132	1/1:8,1:8:16.58:209,17,0	1/1:8,0:7:4.96:90,5,0	1/1:5,0:4:6.86:58,7,0	1/1:5,0:4:5.90:38,6,0	0/0:8,0:8:20.65:0,21,129	0/0:12,0:10:23.61:0,24,154	0/0:7,0:7:14.84:0,15,109	./.	1/1:6,0:2:2.99:24,3,0	0/0:10,0:10:23.94:0,24,216	0/0:11,0:10:18.66:0,19,126	0/0:3,0:1:2.99:0,3,23	1/1:2,9:10:6.02:75,6,0	1/1:12,0:12:6.02:68,6,0	./.	0/1:9,0:9:1.21:33,0,1	0/0:10,0:8:20:0,20,155	0/0:11,0:11:25.43:0,25,159	0/0:4,0:2:6:0,6,59
chr10	72018695	.	CTTTG	C	588.77	PASS	AB=0.941;AC=13;AF=0.271;AN=48;BaseQRankSum=5.351;DP=428;FS=0.000;HRun=0;HaplotypeScore=60.7552;InbreedingCoeff=0.5760;MQ=23.33;MQ0=208;MQRankSum=-2.398;QD=4.91;ReadPosRankSum=1.819;VQSLOD=1.3891;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:8:12.01:112,12,0	0/0:5,0:3:6.02:0,6,141	./.	./.	0/0:18,1:19:12.51:0,13,237	0/0:13,0:6:6.02:0,6,143	0/0:20,0:8:5.98:0,6,91	./.	0/0:12,0:5:3.01:0,3,72	0/0:27,0:19:39.13:0,39,897	0/0:16,0:14:24.04:0,24,444	1/1:6,9:7:12.04:190,12,0	1/1:12,8:9:3.01:48,3,0	0/0:9,0:5:8.99:0,9,163	0/0:14,1:4:6.02:0,6,109	0/1:15,1:13:25.93:26,0,324	0/0:15,0:4:3.01:0,3,71	0/0:9,0:4:6.02:0,6,90	0/0:12,0:5:12.04:0,12,254	0/0:12,0:12:27.09:0,27,585	./.	1/1:7,10:14:12.04:177,12,0	1/1:7,6:12:8.59:142,9,0	1/1:13,10:3:3.01:47,3,0	0/0:13,1:11:15.05:0,15,320	0/0:22,0:11:21.07:0,21,488	0/0:16,0:13:15.05:0,15,295	0/0:11,0:7:3.01:0,3,71
chr10	72020720	.	AG	A	3568.33	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.498;DP=520;FS=0.862;HRun=3;HaplotypeScore=52.0682;InbreedingCoeff=0.9916;MQ=89.50;MQ0=0;MQRankSum=-1.859;QD=33.04;ReadPosRankSum=3.572;VQSLOD=3.9325;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:41:99:0,117,1602	1/1:0,7:7:21.07:260,21,0	0/0:18,0:18:19.49:0,19,580	0/0:19,0:20:57.16:0,57,767	0/0:18,0:18:54.18:0,54,770	0/0:18,0:18:54.18:0,54,778	0/0:15,0:15:42.13:0,42,587	0/0:36,0:36:96.32:0,96,1382	0/0:20,0:20:54.18:0,54,778	1/1:1,16:17:48.15:595,48,0	1/1:0,21:21:48.15:595,48,0	0/0:16,0:16:39.13:0,39,562	0/0:17,0:17:51.17:0,51,734	0/0:12,0:12:30.10:0,30,432	0/0:20,0:20:60.20:0,60,862	0/0:15,0:15:45.15:0,45,646	1/1:0,20:20:57.18:707,57,0	1/1:1,22:23:66.21:816,66,0	0/0:13,0:13:36.12:0,36,518	0/0:17,0:17:45.15:0,45,645	0/0:20,0:20:54.18:0,54,777	0/0:18,0:18:54.18:0,54,777	0/0:16,0:16:45.15:0,45,648	0/0:18,0:18:48.16:0,48,691	1/1:0,20:20:48.15:595,48,0	0/0:18,0:18:54.18:0,54,777	0/0:22,0:22:63.21:0,63,902	0/0:4,0:4:12.04:0,12,173
chr10	72021358	.	CGCCTG	C	1842.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.229;DP=694;FS=18.715;HRun=0;HaplotypeScore=130.5349;InbreedingCoeff=0.9703;MQ=92.65;MQ0=0;MQRankSum=-5.843;QD=48.47;ReadPosRankSum=3.045;VQSLOD=2.7355;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:87.30:1937,87,0	0/0:18,0:18:54.19:0,54,1683	0/0:32,0:32:90.21:0,90,2207	0/0:30,0:30:75.26:0,75,2010	0/0:20,0:20:57.20:0,57,1729	0/0:21,0:21:60.21:0,60,1938	0/0:22,0:22:66.23:0,66,2058	0/0:36,0:36:96.28:0,96,2798	0/0:19,0:19:51.18:0,51,1563	0/0:23,0:23:66.22:0,66,2017	0/0:19,0:19:54.10:0,54,1537	0/0:35,0:35:99:0,105,3129	0/0:24,0:24:72.23:0,72,2243	0/0:28,0:28:81.28:0,81,2517	0/0:33,0:33:99:0,99,2984	0/0:35,0:35:99:0,105,3250	0/0:26,0:26:78.27:0,78,2468	0/0:18,0:18:52.42:0,52,1640	0/0:29,0:29:87.26:0,87,2482	0/0:16,0:16:48.16:0,48,1515	0/0:31,0:31:90.31:0,90,2832	0/0:13,0:13:39.13:0,39,1167	0/0:24,0:24:69.22:0,69,2093	0/0:27,0:27:81.28:0,81,2397	0/0:18,0:18:54.17:0,54,1608	0/0:27,0:27:78.24:0,78,2262	0/0:28,0:26:84.29:0,84,2552	0/0:4,0:4:12.04:0,12,341
chr10	72024786	.	A	AAG	3678.62	PASS	AB=0.536;AC=9;AF=0.161;AN=56;BaseQRankSum=-10.971;DP=593;FS=35.330;HRun=0;HaplotypeScore=69.2158;InbreedingCoeff=0.9122;MQ=81.25;MQ0=1;MQRankSum=-1.152;QD=39.99;ReadPosRankSum=2.065;VQSLOD=2.1620;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,1:42:90.25:0,90,1096	0/0:7,0:7:15.05:0,15,188	0/0:34,0:34:51.07:0,51,600	0/0:29,0:28:54.07:0,54,629	0/0:17,0:17:51.16:0,51,638	0/0:21,0:21:48.15:0,48,601	0/0:23,0:23:51.16:0,51,638	0/0:27,0:27:63.19:0,63,778	0/0:27,0:27:69.20:0,69,840	0/0:10,0:10:24.08:0,24,300	0/0:10,0:10:30.10:0,30,375	1/1:0,16:16:45.15:743,45,0	0/1:2,12:15:1.42:509,0,1	0/0:30,0:30:72.23:0,72,901	0/0:21,0:21:60.19:0,60,751	0/0:21,0:21:57.17:0,57,700	0/0:16,0:16:11.11:0,11,353	0/0:16,0:16:39.12:0,39,488	0/0:19,0:19:36.11:0,36,449	0/0:18,0:18:54.16:0,54,663	0/0:33,0:32:78.23:0,78,962	1/1:0,12:12:30.10:495,30,0	1/1:2,14:16:42.14:693,42,0	1/1:6,26:33:75.26:1239,75,0	0/0:10,0:10:23.20:0,23,296	0/0:25,0:25:51.16:0,51,637	0/0:27,0:26:69.22:0,69,863	0/0:18,0:18:39.07:0,39,434
chr10	72025097	.	G	GA	4267.84	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-7.322;DP=492;FS=42.496;HRun=9;HaplotypeScore=50.4443;InbreedingCoeff=0.9423;MQ=70.12;MQ0=6;MQRankSum=-1.106;QD=22.58;ReadPosRankSum=4.031;VQSLOD=2.6262;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,38:40:93.02:999,93,0	1/1:0,1:1:3.01:33,3,0	0/0:17,0:11:25.84:0,26,237	0/0:18,0:16:18.17:0,18,277	0/0:18,0:18:44.99:0,45,391	0/0:13,0:13:38.99:0,39,338	0/0:19,0:20:52.99:0,53,440	0/0:31,0:31:71.15:0,71,596	0/0:19,0:19:44.97:0,45,390	1/1:5,9:14:30.08:330,30,0	1/1:2,6:8:18.04:194,18,0	1/1:4,9:13:21.94:232,22,0	1/1:0,7:7:12.03:133,12,0	0/0:12,0:12:29.42:0,29,259	0/0:29,0:29:83.94:0,84,718	0/0:20,0:20:56.98:0,57,495	1/1:4,23:27:51.14:564,51,0	1/1:5,15:22:41.77:421,42,0	0/0:19,0:18:5.88:0,6,279	0/0:10,0:10:23.98:0,24,208	0/0:23,0:23:62.98:0,63,544	1/1:0,5:5:9.02:100,9,0	1/1:3,8:11:18.05:199,18,0	1/1:2,30:32:78.68:864,79,0	1/1:1,8:9:18.05:199,18,0	0/0:22,0:22:26.55:0,27,447	0/0:19,0:19:53.98:0,54,469	0/0:12,0:11:32.93:0,33,275
chr10	72025520	.	TCACACACACACACA	T	1120.57	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=4.052;DP=417;FS=23.343;HRun=0;HaplotypeScore=130.1991;InbreedingCoeff=0.6284;MQ=59.08;MQ0=25;MQRankSum=-4.212;QD=20.37;ReadPosRankSum=0.184;VQSLOD=1.2041;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:3.01:0,3,45	0/0:2,0:4:3.01:0,3,62	./.	./.	0/0:8,0:8:12.04:0,12,514	0/0:16,0:16:18.06:0,18,1000	0/0:20,0:20:12.04:0,12,521	0/0:21,0:21:16.61:0,17,447	0/0:5,0:5:9.03:0,9,411	0/0:3,0:6:9.02:0,9,196	0/0:10,0:10:2.58:0,3,71	1/1:5,6:11:9.03:350,9,0	1/1:6,5:12:9.03:331,9,0	0/0:5,0:5:9.03:0,9,503	0/0:6,0:6:9.01:0,9,213	0/0:9,0:11:15.05:0,15,630	0/0:25,0:25:27.54:0,28,637	0/0:10,0:13:5.99:0,6,111	0/0:9,0:8:9:0,9,122	0/0:14,0:11:6.02:0,6,317	0/0:16,0:15:9.03:0,9,335	1/1:8,0:11:12.02:232,12,0	1/1:3,4:7:6.02:234,6,0	1/1:11,3:13:3.01:117,3,0	0/0:9,0:9:6.02:0,6,147	0/0:13,0:12:13.60:0,14,602	0/0:12,0:12:18.06:0,18,719	0/0:11,0:11:15.05:0,15,769
chr10	72026091	.	G	GT	6019.29	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.448;DP=626;FS=0.322;HRun=0;HaplotypeScore=84.3415;InbreedingCoeff=0.9931;MQ=75.09;MQ0=0;MQRankSum=0.204;QD=25.08;ReadPosRankSum=6.022;VQSLOD=5.9634;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:50.46:738,50,0	1/1:1,8:9:17.73:199,18,0	0/0:23,0:23:59.69:0,60,744	0/0:19,0:18:45.97:0,46,581	0/0:26,0:26:78.25:0,78,1068	0/0:17,0:17:51.14:0,51,663	0/0:16,0:16:45.14:0,45,612	0/0:34,0:34:99:0,102,1336	0/0:18,0:18:54.16:0,54,722	1/1:5,24:29:70.01:766,70,0	1/1:4,22:26:53.16:698,53,0	1/1:1,17:18:41.25:449,41,0	1/1:3,14:17:44.06:465,44,0	0/0:26,0:26:78.24:0,78,1071	0/0:25,0:25:72.21:0,72,957	0/0:28,0:28:81.25:0,81,1093	1/1:5,24:30:51.74:707,52,0	0/0:22,0:22:53.17:0,53,307	0/0:27,0:27:77.60:0,78,1034	0/0:20,0:20:57.17:0,57,763	0/0:20,0:20:59.53:0,60,770	1/1:5,18:24:11.21:526,11,0	1/1:3,16:19:49.50:552,50,0	1/1:6,18:24:59.10:658,59,0	1/1:1,13:14:23.68:261,24,0	0/0:24,1:25:42.66:0,43,941	0/0:29,0:29:84.23:0,84,1096	0/0:11,0:11:33.11:0,33,458
chr10	72027909	.	A	AT	3159.98	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-0.607;DP=539;FS=2.684;HRun=10;HaplotypeScore=65.7036;InbreedingCoeff=0.9776;MQ=69.93;MQ0=0;MQRankSum=-0.061;QD=16.54;ReadPosRankSum=1.940;VQSLOD=4.3587;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,858	1/1:3,9:12:27.07:288,27,0	0/0:15,0:15:17.95:0,18,179	0/0:8,0:9:16.69:0,17,112	0/0:19,0:19:50.82:0,51,409	0/0:19,0:19:47.94:0,48,394	0/0:12,0:12:32.96:0,33,271	0/0:29,0:30:65.88:0,66,539	0/0:19,0:19:56.94:0,57,468	1/1:7,22:29:21.16:626,21,0	1/1:3,18:21:51.13:544,51,0	1/1:17,0:17:34.82:143,35,0	1/1:17,0:17:39.87:162,40,0	0/0:20,0:20:47.94:0,48,394	0/0:32,0:32:77.86:0,78,637	0/0:16,0:16:35.93:0,36,293	1/1:3,9:12:5.44:263,5,0	1/1:1,11:12:30.08:319,30,0	0/0:28,0:28:65.88:0,66,537	0/0:23,0:24:64.94:0,65,519	0/0:10,0:10:20.96:0,21,170	1/1:13,0:13:26.78:110,27,0	1/1:21,0:21:45.53:186,46,0	1/1:12,0:12:29.46:121,29,0	1/1:5,20:25:59.98:622,60,0	0/0:11,0:11:17.95:0,18,148	0/0:26,0:26:59.81:0,60,482	0/0:20,0:20:56.93:0,57,468
chr10	72027917	.	T	TTC	3448.55	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-11.549;DP=551;FS=0.000;HRun=0;HaplotypeScore=79.3469;InbreedingCoeff=0.9979;MQ=71.85;MQ0=0;MQRankSum=0.036;QD=40.10;ReadPosRankSum=2.921;VQSLOD=5.7722;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1501	0/0:10,0:10:23.37:0,23,87	0/0:17,0:17:37.98:0,38,466	0/0:10,0:9:21.82:0,22,221	0/0:19,0:19:54.17:0,54,730	0/0:19,0:19:54.16:0,54,737	0/0:14,0:14:42.10:0,42,516	0/0:33,0:33:84.22:0,84,1053	0/0:23,0:23:66.19:0,66,880	0/0:30,0:30:78.49:0,78,436	0/0:20,0:20:53.11:0,53,240	1/1:0,18:18:39.13:673,39,0	1/1:1,17:19:45.15:772,45,0	0/0:17,0:17:51.16:0,51,678	0/0:31,0:31:87.27:0,87,1190	0/0:13,0:13:39.12:0,39,538	0/0:17,0:17:41.25:0,41,250	0/0:13,0:13:31.54:0,32,142	0/0:25,0:25:72.19:0,72,976	0/0:25,0:25:72.17:0,72,958	0/0:10,0:10:27.07:0,27,349	1/1:1,13:14:35.94:552,36,0	1/1:2,21:23:51.14:881,51,0	1/1:0,12:12:33.11:570,33,0	0/0:24,0:24:43.82:0,44,240	0/0:11,0:11:27.07:0,27,337	0/0:28,0:28:78.20:0,78,978	0/0:19,0:19:57.19:0,57,781
chr10	72029384	.	CCT	C	4866.24	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.022;DP=721;FS=5.221;HRun=0;HaplotypeScore=87.8840;InbreedingCoeff=1.0000;MQ=83.61;MQ0=0;MQRankSum=-3.492;QD=39.89;ReadPosRankSum=1.765;VQSLOD=6.4964;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,2023	0/0:17,0:17:51.17:0,51,935	0/0:24,0:24:72.22:0,72,1207	0/0:31,0:31:89.34:0,89,1622	0/0:19,0:19:54.19:0,54,1002	0/0:19,0:19:54.14:0,54,909	0/0:28,0:28:81.28:0,81,1517	0/0:43,0:43:99:0,126,2253	0/0:31,0:31:90.28:0,90,1613	0/0:28,0:28:81.27:0,81,1466	0/0:16,0:16:48.16:0,48,899	1/1:0,22:22:60.20:881,60,0	1/1:3,19:22:57.19:836,57,0	0/0:16,0:16:48.16:0,48,871	0/0:31,0:31:90.31:0,90,1686	0/0:24,0:24:72.25:0,72,1349	0/0:19,0:19:54.17:0,54,966	0/0:38,0:38:99:0,111,2079	0/0:22,0:22:63.22:0,63,1180	0/0:26,0:26:78.27:0,78,1437	0/0:53,0:53:99:0,157,2881	1/1:2,24:26:69.08:1013,69,0	1/1:1,25:26:69.23:1016,69,0	1/1:0,26:26:78.22:1121,78,0	0/0:19,0:19:54.17:0,54,981	0/0:27,0:27:81.28:0,81,1518	0/0:17,0:17:51.17:0,51,955	0/0:13,0:13:36.12:0,36,664
chr10	72029473	.	A	AC	3561.14	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-4.429;DP=642;FS=37.391;HRun=4;HaplotypeScore=68.4766;InbreedingCoeff=0.9961;MQ=87.84;MQ0=0;MQRankSum=-2.154;QD=35.26;ReadPosRankSum=2.380;VQSLOD=1.1851;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1122	0/0:13,0:13:36.10:0,36,408	0/0:30,0:30:50.10:0,50,853	0/0:18,0:18:45.12:0,45,501	0/0:18,0:18:48.14:0,48,544	0/0:16,0:16:48.14:0,48,545	0/0:26,0:26:72.17:0,72,797	0/0:42,0:42:99:0,114,1285	0/0:19,0:19:42.08:0,42,456	0/0:29,0:29:84.24:0,84,952	0/0:20,0:20:48.14:0,48,544	1/1:1,19:20:57.19:780,57,0	1/1:3,14:17:48.15:641,48,0	0/0:27,0:27:75.21:0,75,850	0/0:32,0:32:90.26:0,90,1021	0/0:29,0:29:78.20:0,78,875	0/0:27,0:27:76.77:0,77,854	0/0:12,0:12:30.08:0,30,340	0/0:13,0:13:39.10:0,39,435	0/0:19,0:19:51.15:0,51,578	0/0:23,0:23:69.14:0,69,758	1/1:2,16:18:45.14:599,45,0	1/1:5,15:20:51.16:680,51,0	1/1:6,20:26:63.21:862,63,0	0/0:17,0:17:45.11:0,45,500	0/0:34,0:34:90.25:0,90,1021	0/0:37,0:35:99:0,111,1251	0/0:5,0:5:15.04:0,15,170
chr10	72029588	.	T	TA	289.40	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.207;DP=549;FS=0.000;HRun=10;HaplotypeScore=59.7336;InbreedingCoeff=0.7735;MQ=72.23;MQ0=0;MQRankSum=0.351;QD=18.09;ReadPosRankSum=1.093;VQSLOD=4.1381;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:91.43:0,91,744	0/0:10,0:10:26.92:0,27,213	0/0:13,0:13:29.83:0,30,229	0/0:11,0:10:2.22:0,2,43	0/0:26,0:27:61.94:0,62,498	0/0:24,0:24:59.91:0,60,492	0/0:20,0:20:35.91:0,36,296	0/0:34,0:36:81.93:0,82,646	0/0:17,0:17:41.94:0,42,343	0/0:21,0:21:52.96:0,53,423	0/0:16,0:16:35.92:0,36,292	0/0:13,0:13:32.91:0,33,268	0/0:15,0:15:35.93:0,36,292	0/0:13,0:13:35.94:0,36,290	0/0:24,0:24:50.91:0,51,419	0/0:16,0:16:41.93:0,42,345	0/0:26,0:26:68.92:0,69,566	1/1:2,14:16:36.09:384,36,0	0/0:29,1:30:39.10:0,39,513	0/0:19,0:19:47.92:0,48,391	0/0:16,0:16:41.92:0,42,341	0/0:14,0:14:23.94:0,24,197	0/0:20,0:20:50.80:0,51,417	0/0:13,0:13:6.97:0,7,264	0/0:19,0:19:47.85:0,48,385	0/0:23,0:22:62.93:0,63,517	0/0:20,0:20:50.92:0,51,418	0/0:23,0:23:65.92:0,66,542
chr10	72031840	.	A	AAACC	2909.54	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.330;DP=709;FS=7.223;HRun=0;HaplotypeScore=116.2772;InbreedingCoeff=0.9997;MQ=87.46;MQ0=0;MQRankSum=-3.564;QD=61.91;ReadPosRankSum=1.943;VQSLOD=5.7535;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,39:47:99:3004,114,0	0/0:12,0:12:36.12:0,36,672	0/0:32,0:32:87.77:0,88,1573	0/0:28,0:28:58.36:0,58,1093	0/0:19,0:19:48.15:0,48,865	0/0:28,0:28:78.27:0,78,1456	0/0:23,0:23:66.19:0,66,1196	0/0:24,0:24:60.19:0,60,1064	0/0:20,0:20:48.16:0,48,896	0/0:29,0:29:84.29:0,84,1568	0/0:15,0:15:42.14:0,42,778	0/0:25,0:25:75.26:0,75,1399	0/0:17,0:17:51.17:0,51,952	0/0:22,0:22:66.19:0,66,1197	0/0:23,0:23:66.22:0,66,1203	0/0:19,0:19:57.20:0,57,1064	0/0:37,0:37:99:0,111,2018	0/0:17,0:17:48.16:0,48,896	0/0:28,0:28:78.27:0,78,1452	0/0:22,0:22:60.21:0,60,1108	0/0:57,0:57:99:0,159,2892	0/0:23,0:23:69.21:0,69,1216	0/0:14,0:14:39.13:0,39,721	0/0:38,0:38:99:0,111,2061	0/0:21,0:21:60.19:0,60,1070	0/0:33,0:33:96.32:0,96,1764	0/0:23,0:23:63.22:0,63,1165	0/0:13,0:13:39.13:0,39,728
chr10	72033811	.	GT	G	6253.47	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.960;DP=946;FS=1.437;HRun=1;HaplotypeScore=105.5201;InbreedingCoeff=1.0000;MQ=76.22;MQ0=0;MQRankSum=-3.615;QD=35.73;ReadPosRankSum=3.048;VQSLOD=4.8921;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,151,2378	0/0:13,0:13:39.13:0,39,614	0/0:46,0:42:99:0,122,1828	0/0:39,0:35:92.23:0,92,1287	0/0:29,0:29:87.28:0,87,1367	0/0:21,0:21:63.21:0,63,997	0/0:29,0:29:87.28:0,87,1328	0/0:39,0:39:99:0,117,1841	0/0:33,0:33:93.32:0,93,1487	0/0:37,0:37:99:0,111,1736	0/0:19,0:19:54.11:0,54,778	1/1:1,36:37:75.22:1279,75,0	1/1:0,41:41:99:1545,111,0	0/0:41,0:41:99:0,123,1908	0/0:38,0:38:99:0,111,1730	0/0:55,0:55:99:0,166,2595	0/0:37,0:37:99:0,108,1661	0/0:31,0:31:93.29:0,93,1441	0/0:18,0:18:54.14:0,54,815	0/0:26,0:26:75.22:0,75,1151	0/0:53,0:53:99:0,153,2365	1/1:0,30:30:81.24:1128,81,0	1/1:0,30:30:81.27:1129,81,0	1/1:1,36:37:84.28:1172,84,0	0/0:28,0:27:84.29:0,84,1324	0/0:37,0:37:99:0,111,1756	0/0:35,0:35:99:0,105,1636	0/0:12,0:12:36.12:0,36,575
chr10	72033928	.	A	ATGTGTGTG	5177.25	PASS	AB=0.983;AC=22;AF=0.393;AN=56;BaseQRankSum=3.411;DP=953;FS=2.978;HRun=0;HaplotypeScore=241.6872;InbreedingCoeff=0.8299;MQ=61.09;MQ0=10;MQRankSum=-5.078;QD=13.88;ReadPosRankSum=-2.704;VQSLOD=3.2449;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:56:62.37:0,62,448	1/1:3,0:17:12.51:256,13,0	0/0:41,0:25:3.25:0,3,98	0/1:56,0:28:1.12:1,0,137	0/0:26,0:29:65.18:0,65,1211	0/0:19,0:19:42.01:0,42,721	0/0:47,0:47:96.04:0,96,1563	0/1:31,0:31:0.35:0,0,248	0/0:35,0:36:74.70:0,75,1294	1/1:17,0:47:71.80:848,72,0	1/1:3,0:21:5.37:88,5,0	1/1:12,18:37:26.76:890,27,0	1/1:1,17:19:21.54:815,22,0	0/0:23,0:26:69.04:0,69,1129	0/0:37,0:37:53.05:0,53,1496	0/0:51,0:55:96.18:0,96,1860	1/1:11,0:30:2.26:169,2,0	0/0:11,0:38:36.02:0,36,914	0/0:18,0:17:26.37:0,26,457	0/0:19,0:21:51.82:0,52,1214	0/0:85,0:86:99:0,144,3424	1/1:3,15:21:9.03:313,9,0	1/1:10,11:24:18.05:661,18,0	1/1:32,5:37:39.80:827,40,0	1/1:8,0:28:18.03:308,18,0	0/0:35,0:35:47.17:0,47,1240	0/0:25,0:27:63.02:0,63,1303	0/0:9,0:9:24.08:0,24,588
chr10	72035020	.	C	CT	940.25	PASS	AB=0.917;AC=5;AF=0.089;AN=56;BaseQRankSum=2.998;DP=654;FS=2.178;HRun=9;HaplotypeScore=94.5274;InbreedingCoeff=0.8371;MQ=70.14;MQ0=3;MQRankSum=-6.586;QD=17.10;ReadPosRankSum=-0.082;VQSLOD=3.6048;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,22:27:63.17:696,63,0	0/0:9,0:9:20.98:0,21,182	0/0:27,0:23:43.24:0,43,344	0/0:28,0:23:27.73:0,28,265	0/0:28,0:28:62.96:0,63,547	0/0:25,0:25:65.98:0,66,573	0/0:27,0:27:71.96:0,72,620	0/0:30,1:31:65.94:0,66,567	0/0:21,0:21:47.98:0,48,417	0/0:21,0:21:50.98:0,51,440	0/0:13,0:13:26.95:0,27,229	0/0:14,0:14:26.98:0,27,234	0/0:15,0:15:32.97:0,33,285	0/0:19,0:19:56.99:0,57,494	0/0:25,0:25:65.98:0,66,572	0/0:29,0:30:86.98:0,87,755	0/0:33,0:32:65.98:0,66,573	1/1:5,12:17:33.09:365,33,0	0/0:36,0:36:82.99:0,83,707	0/0:23,1:24:23.77:0,24,432	0/0:28,0:28:65.97:0,66,572	0/0:11,0:11:32.99:0,33,286	0/0:14,0:14:35.33:0,35,311	0/0:34,0:33:59.96:0,60,521	0/0:20,0:20:22.23:0,22,319	0/0:31,1:32:53.82:0,54,694	0/0:33,0:33:86.96:0,87,751	0/1:10,1:11:3.19:3,0,204
chr10	72035038	.	GT	G	4246.63	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=12.665;DP=610;FS=10.520;HRun=8;HaplotypeScore=80.1552;InbreedingCoeff=0.9983;MQ=58.13;MQ0=7;MQRankSum=-3.020;QD=20.52;ReadPosRankSum=2.322;VQSLOD=4.6106;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,19:26:52.62:493,53,0	1/1:1,10:11:21.03:202,21,0	0/0:28,0:19:39.06:0,39,423	0/0:27,1:15:38.51:0,39,400	0/0:29,0:27:57.17:0,57,682	0/0:24,0:24:63.15:0,63,744	0/0:23,0:23:58.39:0,58,721	0/0:23,0:22:48.14:0,48,569	0/0:19,0:20:48:0,48,543	1/1:3,15:18:45.07:434,45,0	1/1:2,9:11:24.04:231,24,0	1/1:0,17:17:39.06:376,39,0	1/1:3,12:15:33.04:316,33,0	0/0:25,0:25:75.22:0,75,892	0/0:21,1:21:57.16:0,57,677	0/0:29,0:29:81.25:0,81,976	1/1:3,19:21:42.06:406,42,0	1/1:5,9:13:24.03:230,24,0	0/0:31,0:30:75.01:0,75,869	0/0:22,0:22:56.96:0,57,664	0/0:24,0:24:51.16:0,51,615	1/1:3,11:14:27.04:259,27,0	1/1:1,11:12:27.04:261,27,0	1/1:2,27:28:66.10:633,66,0	1/1:1,17:18:42.07:405,42,0	0/0:32,1:33:52.76:0,53,887	0/0:30,0:30:68.62:0,69,753	0/0:10,0:10:27.08:0,27,325
chr10	72036926	.	CTT	C	788.67	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.920;DP=820;FS=2.959;HRun=4;HaplotypeScore=105.4988;InbreedingCoeff=0.9999;MQ=74.85;MQ0=0;MQRankSum=-1.677;QD=35.85;ReadPosRankSum=1.795;VQSLOD=2.9580;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,181,3332	0/0:20,0:20:60.21:0,60,1124	0/0:30,0:29:84.29:0,84,1486	0/0:26,0:26:75.26:0,75,1386	0/0:26,0:26:72.23:0,72,1316	0/0:24,0:24:72.22:0,72,1274	0/0:23,0:23:66.21:0,66,1205	0/0:39,0:39:99:0,111,2076	0/0:24,0:24:72.25:0,72,1348	0/0:37,0:37:99:0,111,2076	0/0:18,0:18:51.16:0,51,920	0/0:36,0:36:99:0,105,1966	0/0:28,0:28:84.29:0,84,1567	0/0:31,0:31:90.31:0,90,1680	0/0:34,0:34:99:0,102,1910	0/0:32,0:32:93.32:0,93,1735	0/0:30,0:30:90.29:0,90,1655	1/1:1,21:22:60.20:884,60,0	0/0:20,0:20:57.19:0,57,1036	0/0:28,0:28:84.29:0,84,1569	0/0:44,0:44:99:0,123,2260	0/0:32,0:32:96.33:0,96,1776	0/0:36,0:36:99:0,105,1935	0/0:22,0:22:66.18:0,66,1200	0/0:29,0:29:87.30:0,87,1626	0/0:26,0:26:75.26:0,75,1405	0/0:28,0:27:84.27:0,84,1538	0/0:13,0:13:39.13:0,39,731
chr10	72039939	.	G	GTGTGA	20191.42	PASS	AB=0.897;AC=25;AF=0.446;AN=56;BaseQRankSum=-18.058;DP=763;FS=0.301;HRun=0;HaplotypeScore=135.1671;InbreedingCoeff=0.9271;MQ=82.72;MQ0=0;MQRankSum=-4.223;QD=53.42;ReadPosRankSum=6.013;VQSLOD=4.7328;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,43:52:99:3272,108,0	1/1:1,13:14:26.97:816,27,0	0/0:29,0:29:33.89:0,34,1254	0/0:28,0:29:54.24:0,54,952	0/0:27,0:27:78.27:0,78,1552	0/0:24,0:24:57.18:0,57,1034	0/0:21,0:21:60.19:0,60,1182	0/0:27,0:27:66.21:0,66,1227	0/0:27,0:27:69.24:0,69,1399	1/1:2,18:21:57.15:1543,57,0	1/1:3,18:21:36.12:1086,36,0	1/1:9,25:34:69.24:2084,69,0	1/1:6,28:38:54.19:1634,54,0	0/0:22,0:22:60.21:0,60,1217	0/0:28,0:28:81.28:0,81,1644	0/0:25,0:25:69.12:0,69,1335	1/1:3,26:33:63.22:1909,63,0	1/1:6,31:37:78.27:2360,78,0	0/0:19,0:19:51.17:0,51,951	0/0:32,0:32:93.32:0,93,1841	0/0:39,0:39:99:0,105,2089	1/1:6,14:20:24.08:726,24,0	1/1:2,22:26:45.62:1357,46,0	1/1:6,26:33:72.25:2181,72,0	1/1:0,14:14:33.11:1000,33,0	0/1:31,4:35:99:223,0,1667	0/0:27,0:27:75.23:0,75,1431	0/0:9,0:9:27.09:0,27,547
chr10	72041008	.	T	TA	4582.38	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-9.839;DP=629;FS=0.000;HRun=10;HaplotypeScore=61.5241;InbreedingCoeff=0.9577;MQ=73.15;MQ0=0;MQRankSum=-1.018;QD=22.91;ReadPosRankSum=0.586;VQSLOD=5.5081;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,31:46:99:1106,100,0	0/0:13,0:13:35.95:0,36,296	0/0:15,0:15:11.87:0,12,163	0/0:9,0:9:2.88:0,3,75	0/0:21,0:21:41.89:0,42,342	0/0:19,0:19:41.93:0,42,344	0/0:18,0:18:50.93:0,51,419	0/0:33,0:33:80.88:0,81,665	0/0:29,1:30:71.85:0,72,588	0/0:20,0:20:44.92:0,45,369	0/0:20,0:20:50.90:0,51,416	1/1:6,22:28:70.05:731,70,0	1/1:1,20:21:42.11:448,42,0	0/0:23,0:23:65.89:0,66,538	0/0:24,0:24:56.88:0,57,465	0/0:27,0:27:77.87:0,78,636	0/0:31,0:31:80.84:0,81,656	1/1:6,21:27:32.51:548,33,0	0/0:13,0:15:34.99:0,35,276	0/0:16,0:16:29.93:0,30,246	0/0:15,0:15:41.94:0,42,344	1/1:6,21:27:38.51:615,39,0	1/1:4,19:23:17.47:391,17,0	1/1:1,27:28:50.54:743,51,0	0/0:27,1:28:56.86:0,57,464	0/0:30,0:30:65.86:0,66,542	0/0:17,0:17:38.92:0,39,317	0/0:5,0:5:14.98:0,15,123
chr10	72041153	.	T	TC	6409.26	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=17.356;DP=684;FS=6.504;HRun=0;HaplotypeScore=95.4457;InbreedingCoeff=0.9851;MQ=83.16;MQ0=0;MQRankSum=-3.520;QD=37.70;ReadPosRankSum=3.772;VQSLOD=4.9201;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,49:49:99:1804,126,0	0/0:5,0:5:15.05:0,15,210	0/0:22,0:23:63.21:0,63,882	0/0:18,0:18:51.10:0,51,675	0/0:28,0:28:84.25:0,84,1154	0/0:18,0:17:54.16:0,54,737	0/0:23,0:23:66.21:0,66,906	0/0:27,0:27:78.22:0,78,1028	0/0:25,0:25:75.24:0,75,1032	0/0:23,0:23:69.20:0,69,931	0/0:20,0:20:57.09:0,57,754	1/1:0,21:21:63.21:899,63,0	1/1:1,24:25:63.21:893,63,0	0/0:22,0:22:66.22:0,66,922	0/0:41,0:41:99:0,114,1560	0/0:27,0:27:81.25:0,81,1099	0/0:31,0:31:93.30:0,93,1284	0/0:29,0:29:81.20:0,81,1090	0/0:21,0:21:63.21:0,63,879	0/0:25,0:25:72.21:0,72,985	0/0:27,0:27:78.24:0,78,1070	1/1:0,27:27:72.24:1039,72,0	1/1:0,18:18:45.11:648,45,0	1/1:0,30:30:78.02:1126,78,0	0/0:18,0:18:54.15:0,54,721	0/0:38,0:37:99:0,111,1500	0/0:22,0:22:66.22:0,66,922	0/0:3,0:3:9.03:0,9,126
chr10	72041419	.	CGTCTTAGTTT	C	6901.15	PASS	AB=0.958;AC=11;AF=0.196;AN=56;BaseQRankSum=11.725;DP=642;FS=9.334;HRun=0;HaplotypeScore=207.4932;InbreedingCoeff=0.8744;MQ=71.21;MQ0=0;MQRankSum=-13.484;QD=63.31;ReadPosRankSum=2.556;VQSLOD=3.8741;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,6505	1/1:0,7:7:21.04:561,21,0	0/0:22,0:22:66.18:0,66,2875	0/0:20,0:20:51.16:0,51,2069	0/0:26,0:26:75.24:0,75,3866	0/0:25,0:25:75.24:0,75,3645	0/0:17,0:17:51.16:0,51,2461	0/0:24,0:24:66.23:0,66,3329	0/0:20,0:20:60.19:0,60,3000	1/1:1,24:25:66.22:2074,66,0	1/1:0,16:16:38.99:1058,39,0	0/0:27,0:27:75.21:0,75,3767	0/0:19,0:19:57.20:0,57,2840	0/0:19,0:19:57.16:0,57,2767	0/0:23,0:23:69.22:0,69,3395	0/0:29,0:29:87.26:0,87,4289	1/1:1,17:18:51.05:1460,51,0	0/0:18,0:18:45.15:0,45,2333	0/0:17,0:17:51.17:0,51,2437	0/0:21,0:21:63.22:0,63,3300	0/0:39,0:39:99:0,114,5777	0/0:33,0:33:93.32:0,93,4872	0/0:33,0:33:99:0,99,5180	0/0:33,0:33:87.28:0,87,4391	1/1:0,20:20:54.14:1718,54,0	0/1:22,1:23:30.58:31,0,3089	0/0:20,0:20:57.20:0,57,2857	0/0:3,0:3:9.03:0,9,471
chr10	72041483	.	CG	C	5672.48	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=14.191;DP=582;FS=0.337;HRun=7;HaplotypeScore=89.1940;InbreedingCoeff=0.9806;MQ=84.68;MQ0=0;MQRankSum=-4.847;QD=22.69;ReadPosRankSum=4.188;VQSLOD=4.6167;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,41:45:99:1162,114,0	1/1:0,4:4:12.03:121,12,0	0/0:24,0:24:46.08:0,46,481	0/0:22,0:22:44.99:0,45,516	0/0:25,0:25:63.19:0,63,777	0/0:22,0:22:57.17:0,57,699	0/0:21,0:21:60.19:0,60,754	0/0:19,0:19:42.04:0,42,453	0/0:15,0:15:42.03:0,42,492	1/1:9,16:25:54.12:549,54,0	1/1:7,6:13:24.04:240,24,0	1/1:4,11:15:33.07:335,33,0	1/1:3,16:19:42.08:422,42,0	0/0:19,0:19:51.14:0,51,617	0/0:26,0:26:69.21:0,69,857	0/0:26,0:26:75.19:0,75,891	1/1:2,17:19:42.10:428,42,0	1/1:2,16:18:33.04:326,33,0	0/0:20,0:20:54.63:0,55,667	0/0:16,0:16:39.12:0,39,480	0/0:23,0:23:54.17:0,54,671	1/1:5,13:18:39.08:396,39,0	1/1:4,16:20:30.07:400,30,0	1/1:0,39:39:96.22:978,96,0	1/1:5,10:15:32.99:314,33,0	0/0:22,0:22:66.20:0,66,817	0/0:30,0:30:87.26:0,87,1078	0/0:2,0:2:6.02:0,6,75
chr10	72041490	.	GA	G	1097.31	PASS	AB=0.983;AC=17;AF=0.304;AN=56;BaseQRankSum=17.498;DP=605;FS=4.684;HRun=2;HaplotypeScore=95.6301;InbreedingCoeff=0.3438;MQ=85.80;MQ0=0;MQRankSum=-5.334;QD=4.42;ReadPosRankSum=7.403;VQSLOD=0.5957;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:46,0:46:29.14:190,0,29	0/1:5,0:5:13.70:25,0,14	0/0:24,0:24:56.35:0,56,615	0/0:25,0:25:71.86:0,72,792	0/0:24,0:24:63.19:0,63,864	0/0:22,0:22:63.18:0,63,851	0/0:24,0:24:72.18:0,72,958	0/0:21,0:21:60.11:0,60,728	0/0:17,0:17:43.98:0,44,582	0/1:22,0:22:68.26:72,0,68	0/1:11,0:11:28.83:47,0,29	0/1:13,2:15:13.28:119,0,13	1/1:17,2:19:7.22:144,7,0	0/0:21,0:21:57.16:0,57,754	0/0:26,0:26:78.22:0,78,1065	0/0:25,0:25:72.24:0,72,1023	0/1:22,0:22:68.74:70,0,69	1/1:18,0:18:20.65:73,21,0	0/0:27,0:27:78.66:0,79,983	0/0:20,0:20:54.04:0,54,654	0/0:22,0:22:66.15:0,66,856	1/1:15,1:16:1.54:73,2,0	1/1:18,1:19:33.17:196,33,0	1/1:41,0:41:27.18:189,27,0	0/1:14,0:14:37.65:80,0,38	0/0:25,0:25:75.23:0,75,1022	0/0:32,0:32:93.22:0,93,1210	0/0:2,0:2:6.02:0,6,86
chr10	72044306	.	AACACACACACACACACACACACACACACACACACAC	A	3554.16	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.021;DP=524;FS=23.204;HRun=0;HaplotypeScore=406.8422;InbreedingCoeff=0.8310;MQ=65.76;MQ0=13;MQRankSum=-5.533;QD=48.69;ReadPosRankSum=3.321;VQSLOD=0.8616;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:72.72:0,73,6914	0/0:5,0:5:6.02:0,6,421	0/0:15,0:12:9.03:0,9,310	0/0:28,0:23:36.12:0,36,1401	0/0:17,0:17:27.09:0,27,3419	0/0:22,0:21:45.15:0,45,4606	0/0:21,0:21:48.16:0,48,4830	0/0:20,0:17:27.09:0,27,2068	0/0:17,0:17:18.06:0,18,1471	0/0:19,0:19:27.09:0,27,2887	0/0:12,0:14:15.05:0,15,1517	1/1:10,4:14:6.02:547,6,0	1/1:13,5:18:12.04:1094,12,0	0/0:16,0:16:24.08:0,24,2553	0/0:21,0:21:39.13:0,39,4086	0/0:15,0:15:33.11:0,33,3793	0/0:30,0:37:52.12:0,52,5313	0/0:17,0:21:39.13:0,39,4441	0/0:17,0:17:24.55:0,25,1636	0/0:9,0:9:12.04:0,12,1151	0/0:37,0:35:48.64:0,49,5364	1/1:8,5:13:6.02:547,6,0	1/1:8,4:12:5.30:546,5,0	1/1:12,4:14:8.36:819,8,0	0/0:14,0:13:24.55:0,25,2070	0/0:14,0:16:36.12:0,36,3728	0/0:21,0:23:34.88:0,35,3885	0/0:9,0:9:9.03:0,9,1425
chr10	72046130	.	C	CCA	550.34	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=2.394;DP=441;FS=0.000;HRun=0;HaplotypeScore=63.6407;InbreedingCoeff=0.8466;MQ=66.43;MQ0=8;MQRankSum=0.418;QD=11.47;ReadPosRankSum=-0.063;VQSLOD=2.9073;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:60.13:0,60,765	0/0:3,0:3:3.01:0,3,41	0/0:37,0:23:41.67:0,42,618	0/0:50,0:25:25.02:0,25,405	0/0:14,0:14:30.10:0,30,404	0/0:12,0:12:30.03:0,30,382	0/0:17,0:17:41.93:0,42,523	0/0:31,0:29:62.75:0,63,804	0/0:11,0:11:30.10:0,30,400	0/0:11,0:10:18.05:0,18,235	0/0:10,0:10:27.09:0,27,368	1/1:9,0:8:17.69:241,18,0	1/1:8,0:7:18.03:260,18,0	0/0:9,0:9:15:0,15,198	0/0:14,0:14:39.09:0,39,509	0/0:6,0:6:9.03:0,9,122	0/0:16,0:15:21.07:0,21,280	0/0:12,0:12:29.83:0,30,358	0/0:18,0:18:42.11:0,42,539	0/0:13,0:13:36.09:0,36,470	0/0:25,0:24:64.77:0,65,803	./.	1/1:7,0:7:12.04:183,12,0	1/1:5,19:23:0.89:2,1,0	0/0:14,0:13:29.99:0,30,381	0/0:6,0:6:12.04:0,12,164	0/0:19,0:19:48.15:0,48,618	0/0:7,0:7:18.04:0,18,221
chr10	72046132	.	A	ACA	550.33	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=2.358;DP=432;FS=0.000;HRun=0;HaplotypeScore=64.0254;InbreedingCoeff=0.8471;MQ=64.84;MQ0=8;MQRankSum=-0.043;QD=11.71;ReadPosRankSum=0.101;VQSLOD=2.6859;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.13:0,60,765	0/0:3,0:3:3.01:0,3,41	0/0:36,0:22:41.67:0,42,618	0/0:48,0:23:25.02:0,25,405	0/0:14,0:14:30.10:0,30,404	0/0:11,0:11:30.03:0,30,382	0/0:17,0:17:41.93:0,42,523	0/0:27,0:25:62.75:0,63,804	0/0:11,0:11:30.10:0,30,400	0/0:11,0:10:18.05:0,18,235	0/0:11,0:11:27.09:0,27,368	1/1:10,0:9:17.69:241,18,0	1/1:8,0:7:18.03:260,18,0	0/0:10,0:10:15:0,15,198	0/0:14,0:14:39.09:0,39,509	0/0:6,0:6:9.03:0,9,122	0/0:14,0:13:23.81:0,24,292	0/0:12,0:12:29.83:0,30,358	0/0:20,0:20:42.11:0,42,539	0/0:13,0:13:36.09:0,36,470	0/0:25,0:24:64.77:0,65,803	./.	1/1:6,0:6:12.04:183,12,0	1/1:23,0:22:0.89:2,1,0	0/0:14,0:13:29.96:0,30,381	0/0:6,0:6:12.04:0,12,164	0/0:18,0:18:48.15:0,48,618	0/0:7,0:7:18.04:0,18,221
chr10	72046216	.	TC	T	2077.93	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.866;DP=441;FS=5.328;HRun=6;HaplotypeScore=53.8700;InbreedingCoeff=0.9885;MQ=70.56;MQ0=8;MQRankSum=1.540;QD=26.99;ReadPosRankSum=1.208;VQSLOD=4.0472;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.20:0,63,828	0/0:10,0:10:24.07:0,24,303	0/0:24,0:18:27.77:0,28,400	0/0:50,0:28:45.36:0,45,718	0/0:8,0:8:24.06:0,24,301	0/0:22,0:22:60.07:0,60,787	0/0:20,0:20:50.83:0,51,634	0/0:20,0:20:57.18:0,57,733	0/0:8,0:8:24.04:0,24,296	0/0:13,0:13:39.13:0,39,509	0/0:9,0:9:27.07:0,27,341	1/1:1,14:15:42.11:450,42,0	1/1:1,11:12:33.08:354,33,0	0/0:7,0:7:21.07:0,21,276	0/0:16,0:16:48.14:0,48,613	0/0:9,0:9:21.06:0,21,262	0/0:28,0:28:72.19:0,72,922	0/0:16,1:17:15.94:0,16,545	0/0:11,0:11:24.08:0,24,314	0/0:18,0:18:54.16:0,54,696	0/0:11,0:11:30.10:0,30,393	1/1:1,16:17:45.11:483,45,0	1/1:1,14:15:42.09:451,42,0	1/1:2,16:18:48.12:515,48,0	0/0:11,0:11:33.11:0,33,434	0/0:12,0:12:28.89:0,29,345	0/0:11,0:10:27.06:0,27,327	0/0:5,0:5:15.05:0,15,197
chr10	72046307	.	C	CTT	1988.72	PASS	AB=0.600;AC=17;AF=0.304;AN=56;BaseQRankSum=3.361;DP=474;FS=3.444;HRun=13;HaplotypeScore=75.8026;InbreedingCoeff=0.6458;MQ=71.79;MQ0=4;MQRankSum=-0.443;QD=11.30;ReadPosRankSum=0.675;VQSLOD=2.4803;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:29:39.87:0,40,476	1/1:3,4:8:8.34:68,8,0	0/0:27,0:18:4.33:0,4,152	0/0:22,0:9:9.38:0,9,65	0/0:19,0:22:38.12:0,38,349	0/0:16,0:16:41.98:0,42,370	0/0:14,0:14:38.45:0,38,321	0/0:21,0:21:44.69:0,45,376	0/0:8,0:8:14.94:0,15,132	1/1:6,6:14:20.54:225,21,0	1/1:8,8:18:26.36:241,26,0	1/1:5,0:12:20.82:102,21,0	0/1:2,1:10:35.79:50,0,36	0/0:7,0:7:11.94:0,12,102	0/0:9,0:10:23.69:0,24,196	0/0:6,0:6:11.94:0,12,106	1/1:7,22:33:62.16:761,62,0	0/0:15,0:17:38.70:0,39,328	0/0:10,0:14:8.11:0,8,138	0/0:15,0:15:29.69:0,30,251	0/0:6,0:6:8.92:0,9,79	0/1:12,0:21:30.33:105,0,30	1/1:11,1:25:42.54:174,43,0	0/1:3,2:18:15.89:131,0,16	1/1:6,7:17:26.98:326,27,0	0/0:18,1:19:1.13:0,1,300	0/0:20,0:24:26.68:0,27,341	0/0:15,0:18:38.56:0,39,318
chr10	72047686	.	GTTTTTTGT	G	3063.34	PASS	AB=0.963;AC=11;AF=0.196;AN=56;BaseQRankSum=8.815;DP=638;FS=6.140;HRun=0;HaplotypeScore=162.8364;InbreedingCoeff=0.9094;MQ=68.57;MQ0=0;MQRankSum=-4.959;QD=24.91;ReadPosRankSum=1.247;VQSLOD=2.9893;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:1,1:47:38.37:0,38,288	1/1:1,10:11:20.96:517,21,0	0/0:18,0:17:44.24:0,44,770	0/0:23,0:21:56.94:0,57,1104	0/0:30,0:30:87.22:0,87,2851	0/0:24,0:24:69.19:0,69,2245	0/0:24,0:24:66.14:0,66,1795	0/0:42,0:42:99:0,117,2184	0/0:15,0:15:41.99:0,42,1188	1/1:1,23:24:64.23:1085,64,0	1/1:0,15:15:40.84:298,41,0	0/0:18,0:18:42.11:0,42,515	0/0:18,0:18:54.12:0,54,625	0/0:18,0:18:48.12:0,48,1482	0/0:24,0:24:72.18:0,72,2195	0/0:23,0:23:69.19:0,69,2230	1/1:0,20:21:21.07:565,21,0	0/0:16,0:16:39.47:0,39,881	0/0:30,0:30:76.96:0,77,1711	0/0:15,0:15:45.12:0,45,1440	0/0:39,0:39:99:0,117,3539	0/0:19,0:19:57.08:0,57,616	0/0:14,0:14:36.07:0,36,374	0/0:29,0:29:72.18:0,72,870	1/1:2,24:26:41.63:769,42,0	0/1:25,1:26:5.25:5,0,1736	0/0:18,0:18:54.13:0,54,1752	0/0:11,0:11:30.06:0,30,1068
chr10	72047689	.	TTTTG	T	3928.55	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=12.955;DP=644;FS=10.381;HRun=0;HaplotypeScore=114.5545;InbreedingCoeff=0.9389;MQ=67.66;MQ0=1;MQRankSum=-1.162;QD=16.30;ReadPosRankSum=2.191;VQSLOD=2.9968;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:47,0:47:34.21:528,34,0	1/1:10,0:10:18.02:167,18,0	0/0:19,0:18:9.03:0,9,190	0/0:22,0:20:17.63:0,18,308	0/0:31,0:31:63.22:0,63,1432	0/0:23,0:23:45.14:0,45,1002	0/0:24,0:24:39.13:0,39,872	0/0:42,0:42:39.02:0,39,775	0/0:14,0:14:24.04:0,24,518	1/1:23,0:23:7.07:228,7,0	1/1:15,0:15:3:28,3,0	1/1:5,14:19:30.10:473,30,0	1/1:7,12:19:33.11:520,33,0	0/0:19,0:19:36.11:0,36,764	0/0:24,0:24:45.14:0,45,1018	0/0:24,0:24:45.15:0,45,1042	1/1:21,0:21:21.02:195,21,0	0/0:12,0:19:24:0,24,308	0/0:32,0:31:28.81:0,29,645	0/0:15,0:15:27.09:0,27,640	0/0:40,0:40:72.21:0,72,1535	1/1:6,15:21:25.85:423,26,0	1/1:5,8:13:21.07:331,21,0	1/1:7,22:29:53.67:813,54,0	1/1:24,0:24:24.03:222,24,0	0/0:26,0:26:8.34:0,8,581	0/0:19,0:18:39.13:0,39,902	0/0:10,0:10:21.07:0,21,499
chr10	72048093	.	CAAT	C	953.99	PASS	AB=1.000;AC=34;AF=0.773;AN=44;BaseQRankSum=3.296;DP=236;FS=5.909;HRun=0;HaplotypeScore=43.2012;InbreedingCoeff=0.3852;MQ=75.42;MQ0=3;MQRankSum=-0.704;QD=5.78;ReadPosRankSum=-0.085;VQSLOD=0.6109;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:2.98:21,3,0	1/1:2,0:2:2.22:7,2,0	./.	./.	1/1:11,4:15:6.02:79,6,0	1/1:5,4:9:9.03:119,9,0	./.	1/1:25,0:24:5.99:50,6,0	1/1:5,2:7:6.02:79,6,0	0/1:14,0:14:16.72:49,0,17	1/1:8,0:8:1.25:3,1,0	./.	1/1:2,0:4:2.98:21,3,0	1/1:5,3:8:6.02:79,6,0	1/1:5,3:8:9.03:119,9,0	1/1:2,0:2:2.99:24,3,0	0/1:12,0:12:0.31:16,0,0	0/0:19,0:19:24.08:0,24,449	0/0:13,0:13:9.03:0,9,163	0/0:6,0:6:6.02:0,6,115	1/1:5,1:6:3.01:40,3,0	./.	1/1:1,0:6:2.98:21,3,0	./.	1/1:8,0:8:2.04:6,2,0	1/1:5,3:8:9.03:119,9,0	0/0:7,0:7:6.02:0,6,115	1/1:2,10:12:18.06:237,18,0
chr10	72048122	.	ATAATAATAATAATAATAG	A	270.18	PASS	AB=1.000;AC=8;AF=0.160;AN=50;BaseQRankSum=3.531;DP=190;FS=4.985;HRun=0;HaplotypeScore=101.7780;InbreedingCoeff=-0.0352;MQ=55.93;MQ0=4;MQRankSum=-0.125;QD=4.16;ReadPosRankSum=-0.408;VQSLOD=1.7564;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:10:3.01:152,3,0	0/0:4,0:4:3.40:0,3,18	./.	./.	0/0:6,0:6:18.03:0,18,610	0/0:8,0:8:21.03:0,21,805	0/0:3,0:3:9.01:0,9,150	0/0:20,0:19:51.07:0,51,882	0/0:3,0:3:9.01:0,9,388	0/1:12,0:12:49.12:49,0,183	0/1:8,0:8:53.64:54,0,58	0/0:5,0:5:14.97:0,15,208	0/1:4,0:4:49.99:50,0,69	0/0:4,0:4:8.90:0,9,349	0/0:4,0:4:12.04:0,12,618	0/0:5,0:5:15.01:0,15,199	0/1:17,0:17:30.06:30,0,389	0/0:13,0:13:39.12:0,39,2403	0/0:11,0:9:24.06:0,24,947	0/0:5,0:5:15.02:0,15,691	0/0:2,0:2:6.02:0,6,315	0/0:2,0:2:6.02:0,6,101	0/1:7,0:7:53.08:53,0,74	./.	0/0:8,0:8:10.22:0,10,76	0/1:7,0:7:6.92:7,0,799	0/0:3,0:3:7.58:0,8,524	0/0:17,0:17:39.05:0,39,1470
chr10	72048128	.	ATAATAATAATAG	A	1698.30	PASS	AB=1.000;AC=15;AF=0.300;AN=50;BaseQRankSum=4.127;DP=195;FS=0.000;HRun=0;HaplotypeScore=76.0159;InbreedingCoeff=0.5580;MQ=56.41;MQ0=3;MQRankSum=-0.372;QD=21.77;ReadPosRankSum=1.388;VQSLOD=1.8188;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:3.01:91,3,0	1/1:0,4:4:3.01:96,3,0	./.	./.	0/0:6,0:6:15.03:0,15,352	0/0:8,0:8:21.02:0,21,487	0/0:4,0:4:11.99:0,12,102	0/0:19,0:18:52.79:0,53,496	0/0:3,0:3:9.01:0,9,232	1/1:0,12:12:32.91:621,33,0	1/1:0,8:8:17.72:180,18,0	0/0:6,0:6:17.78:0,18,127	0/1:4,0:4:31.97:58,0,32	0/0:4,0:4:8.90:0,9,209	0/0:4,0:4:12.02:0,12,322	0/0:5,0:5:14.98:0,15,124	1/1:17,1:18:44.47:499,44,0	0/0:13,0:13:36.12:0,36,1561	0/0:12,0:10:30.05:0,30,643	0/0:6,0:6:18.02:0,18,490	0/0:3,0:3:9.01:0,9,204	0/0:2,0:2:5.83:0,6,33	0/1:7,0:7:31.23:72,0,31	./.	1/1:1,7:8:9.03:244,9,0	0/1:8,0:8:3.92:4,0,516	0/0:3,0:3:2.09:0,2,360	0/0:19,0:19:45.03:0,45,919
chr10	72049901	.	A	AT	2378.72	PASS	AB=0.875;AC=14;AF=0.250;AN=56;BaseQRankSum=-6.462;DP=479;FS=0.444;HRun=10;HaplotypeScore=51.6842;InbreedingCoeff=0.8115;MQ=65.01;MQ0=2;MQRankSum=-0.991;QD=17.24;ReadPosRankSum=1.202;VQSLOD=3.9523;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:73.93:0,74,595	1/1:2,5:9:20.72:188,21,0	0/0:9,0:9:11.92:0,12,88	0/0:8,0:6:8.98:0,9,73	0/0:22,0:22:50.90:0,51,416	0/0:20,1:21:49.13:0,49,390	0/1:6,1:7:30.67:31,0,102	0/0:26,0:26:71.85:0,72,583	0/0:13,0:13:32.96:0,33,271	1/1:4,17:21:51.13:544,51,0	1/1:5,21:27:34.86:543,35,0	0/0:14,0:14:23.93:0,24,197	0/0:12,0:13:35:0,35,277	0/0:14,1:15:9.96:0,10,288	0/0:15,0:15:44.92:0,45,364	0/0:14,1:14:7:0,7,264	1/1:7,19:26:38.50:607,38,0	1/1:5,6:11:17.91:175,18,0	0/0:23,1:24:27.92:0,28,427	0/0:20,0:21:52.95:0,53,422	0/0:11,0:11:32.96:0,33,271	0/0:10,0:10:29.95:0,30,243	0/0:18,0:18:50.93:0,51,417	0/0:12,0:12:32.96:0,33,271	1/1:4,19:23:45.11:478,45,0	0/0:25,1:26:36.82:0,37,498	0/1:11,2:14:0.15:0,0,192	0/0:13,0:13:35.95:0,36,296
chr10	72050928	.	GT	G	2018.01	PASS	AB=0.818;AC=15;AF=0.268;AN=56;BaseQRankSum=6.083;DP=549;FS=2.364;HRun=12;HaplotypeScore=74.3196;InbreedingCoeff=0.7965;MQ=71.78;MQ0=1;MQRankSum=-0.686;QD=12.01;ReadPosRankSum=2.725;VQSLOD=3.8047;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,25:32:47.23:550,47,0	1/1:1,6:7:14.94:116,15,0	0/1:14,2:16:26.15:26,0,157	0/0:11,0:11:6.01:0,6,61	0/0:25,2:27:11.10:0,11,467	0/0:20,0:21:56.95:0,57,562	0/0:20,0:20:57.11:0,57,579	0/0:32,2:34:31.66:0,32,675	0/0:10,1:12:0.64:0,1,174	1/1:10,13:23:29.82:232,30,0	1/1:4,8:12:23.89:186,24,0	0/0:7,0:20:51.90:0,52,306	0/0:7,0:19:34.71:0,35,212	0/0:16,0:16:45:0,45,438	0/0:21,1:23:30.70:0,31,472	0/0:15,1:16:18.83:0,19,362	1/1:8,21:29:56.73:441,57,0	1/1:8,19:28:25.78:366,26,0	0/0:17,2:19:9.82:0,10,276	0/0:17,2:20:23.48:0,23,374	0/0:11,0:11:30.05:0,30,299	0/0:4,0:17:37.58:0,38,217	0/0:2,0:12:20.01:0,20,106	0/0:6,0:23:45.88:0,46,268	1/1:4,15:19:14.37:295,14,0	0/0:18,2:20:1.59:0,2,364	0/0:29,0:30:74.98:0,75,745	0/0:10,0:10:27.01:0,27,253
chr10	72050985	.	T	TGA	3706.92	PASS	AB=0.871;AC=13;AF=0.232;AN=56;BaseQRankSum=-1.698;DP=676;FS=4.341;HRun=0;HaplotypeScore=126.5515;InbreedingCoeff=0.2871;MQ=63.59;MQ0=15;MQRankSum=0.937;QD=17.57;ReadPosRankSum=-2.688;VQSLOD=3.2545;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:32:59.97:549,60,0	1/1:5,6:11:21.01:286,21,0	0/0:62,0:25:10.10:0,10,82	0/0:74,0:37:17.29:0,17,230	0/0:30,0:30:72.18:0,72,831	0/0:16,0:16:42.12:0,42,495	0/0:26,0:27:65.94:0,66,700	0/0:27,0:28:44.79:0,45,420	0/0:14,0:14:24.04:0,24,264	0/1:18,11:29:26.61:809,0,27	0/1:12,5:17:27.75:367,0,28	0/1:13,0:13:46.39:46,0,76	0/1:16,0:16:30.68:31,0,231	0/0:10,0:11:20.84:0,21,242	0/0:19,0:19:42.10:0,42,482	0/0:20,0:21:53.97:0,54,601	1/1:28,21:49:56.90:1344,57,0	0/0:25,0:27:51.84:0,52,523	0/0:18,0:19:23.74:0,24,216	0/0:17,0:17:38.75:0,39,410	0/0:20,0:19:54.11:0,54,633	0/1:16,0:17:18.28:18,0,91	0/1:17,0:17:36.83:37,0,121	0/0:26,0:26:11.02:0,11,212	0/1:3,6:9:18.14:220,0,18	0/0:21,0:21:47.96:0,48,504	0/0:24,0:25:59.83:0,60,666	0/0:5,0:5:15.04:0,15,176
chr10	72050996	.	G	GAGAGAGAC	1405.43	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=1.681;DP=649;FS=7.595;HRun=0;HaplotypeScore=191.0934;InbreedingCoeff=0.7386;MQ=58.82;MQ0=12;MQRankSum=0.860;QD=11.07;ReadPosRankSum=-0.381;VQSLOD=2.0072;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:31:22.65:203,0,23	0/0:10,0:10:20.90:0,21,192	0/0:49,0:18:8.94:0,9,66	0/0:64,0:27:2.34:0,2,24	0/0:35,0:35:65.84:0,66,1088	0/0:18,0:18:39.10:0,39,857	0/0:32,0:31:63.13:0,63,1159	0/0:25,0:25:30.05:0,30,346	0/0:15,0:15:17.83:0,18,354	0/0:28,0:28:47.66:0,48,547	0/0:15,0:15:31.12:0,31,331	1/1:12,2:15:5.15:306,5,0	1/1:13,3:17:18.04:401,18,0	0/0:9,0:9:21.54:0,22,497	0/0:18,0:18:24.08:0,24,537	0/0:21,0:21:51.15:0,51,1100	0/0:51,0:51:50.86:0,51,847	0/0:24,0:24:42.20:0,42,860	0/0:16,0:16:11.86:0,12,144	0/0:16,0:16:36.06:0,36,594	0/0:20,0:19:47.37:0,47,1030	1/1:16,4:20:11.97:131,12,0	1/1:9,5:16:9.02:195,9,0	1/1:23,2:27:21.04:333,21,0	0/0:10,0:10:11.89:0,12,129	0/0:20,0:20:33.07:0,33,632	0/0:21,0:21:45.15:0,45,1025	0/0:5,0:5:3.01:0,3,76
chr10	72051177	.	TTG	T	373.82	PASS	AB=0.958;AC=22;AF=0.423;AN=52;BaseQRankSum=1.280;DP=560;FS=0.000;HRun=0;HaplotypeScore=81.9717;InbreedingCoeff=-0.0058;MQ=62.14;MQ0=12;MQRankSum=0.664;QD=1.06;ReadPosRankSum=0.642;VQSLOD=1.5227;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,11:41:14.45:55,0,14	1/1:6,2:8:3.01:32,3,0	./.	./.	0/0:15,0:15:12:0,12,131	0/1:11,1:12:17.44:17,0,69	0/1:31,2:33:8.03:8,0,172	0/0:23,0:23:5.88:0,6,36	0/1:16,0:16:39.19:39,0,92	1/1:18,0:16:2.97:21,3,0	1/1:15,1:18:2.65:14,3,0	0/0:17,0:17:6:0,6,64	0/0:13,0:13:17.81:0,18,163	0/0:12,0:12:14.69:0,15,133	0/1:23,0:23:11.11:11,0,220	0/1:21,0:21:5.99:6,0,259	1/1:28,2:30:2.07:144,2,0	1/1:14,0:17:5.68:28,6,0	0/1:24,0:24:32.18:32,0,66	0/1:11,1:12:15.95:26,0,16	0/1:38,0:38:19.87:20,0,149	0/0:17,0:17:9:0,9,91	0/0:10,0:10:2.99:0,3,24	0/0:25,0:34:6.01:0,6,69	1/1:12,0:17:8.83:65,9,0	0/1:22,0:20:8.44:8,0,147	0/0:17,0:17:12.02:0,12,157	0/0:9,0:8:2.90:0,3,16
chr10	72052147	.	CCAA	C	1157.67	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.491;DP=712;FS=12.532;HRun=0;HaplotypeScore=99.2242;InbreedingCoeff=0.9933;MQ=87.91;MQ0=1;MQRankSum=-3.258;QD=28.24;ReadPosRankSum=-1.034;VQSLOD=3.0094;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,38:41:80.95:1253,81,0	0/0:7,0:7:21.07:0,21,451	0/0:26,0:26:62.38:0,62,1254	0/0:29,0:29:32.83:0,33,1179	0/0:19,0:19:51.06:0,51,1095	0/0:27,0:27:78.27:0,78,1676	0/0:41,0:41:99:0,117,2460	0/0:33,0:33:84.29:0,84,1795	0/0:29,0:29:84.26:0,84,1729	0/0:21,0:21:54.19:0,54,1155	0/0:19,0:19:57.17:0,57,1170	0/0:23,0:23:66.23:0,66,1395	0/0:25,0:25:60.21:0,60,1276	0/0:19,0:19:42.13:0,42,862	0/0:31,0:31:78.24:0,78,1628	0/0:32,0:32:93.31:0,93,1944	0/0:34,0:33:84.29:0,84,1804	0/0:27,0:27:78.23:0,78,1624	0/0:17,0:17:33.11:0,33,709	0/0:24,0:23:57.19:0,57,1175	0/0:40,0:40:99:0,108,2232	0/0:25,0:25:69.24:0,69,1481	0/0:23,0:23:69.22:0,69,1441	0/0:34,0:34:93.27:0,93,1878	0/0:14,0:14:36.12:0,36,773	0/0:19,0:19:57.20:0,57,1224	0/0:25,0:25:66.23:0,66,1415	0/0:8,0:8:24.08:0,24,516
chr10	72052856	.	A	AACAC	1137.76	PASS	AB=0.906;AC=24;AF=0.462;AN=52;BaseQRankSum=3.449;DP=514;FS=0.681;HRun=0;HaplotypeScore=96.1390;InbreedingCoeff=0.4928;MQ=62.54;MQ0=12;MQRankSum=-0.395;QD=4.17;ReadPosRankSum=-2.277;VQSLOD=1.0085;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:38:0.25:277,0,0	1/1:6,0:6:6.01:72,6,0	1/1:33,0:16:0.47:1,0,0	./.	0/0:13,0:13:17.07:0,17,200	0/0:10,0:10:9.81:0,10,107	0/0:26,0:27:26.98:0,27,343	0/1:18,0:18:16.83:17,0,20	0/0:15,0:16:16.76:0,17,218	1/1:11,0:19:24.71:262,25,0	1/1:8,0:8:2.88:37,3,0	0/1:11,0:10:18.77:19,0,41	0/1:18,0:18:1.51:2,0,73	0/0:15,0:16:14.61:0,15,123	0/0:8,0:10:6.28:0,6,91	0/0:15,0:15:6.56:0,7,203	1/1:13,10:28:14.99:218,15,0	0/1:12,0:21:86.08:86,0,104	0/0:14,0:14:7.73:0,8,57	0/0:15,0:15:11.93:0,12,149	0/0:36,0:35:26.44:0,26,343	1/1:7,0:12:1.23:10,1,0	1/1:7,0:18:16.72:83,17,0	1/1:8,0:23:9.46:53,9,0	1/1:11,4:18:9.03:175,9,0	0/0:14,0:15:11.94:0,12,177	0/0:14,0:15:16.60:0,17,215	./.
chr10	72053007	.	T	TA	1741.78	PASS	AB=0.957;AC=11;AF=0.196;AN=56;BaseQRankSum=-6.837;DP=583;FS=2.776;HRun=11;HaplotypeScore=65.9042;InbreedingCoeff=0.7835;MQ=79.09;MQ0=0;MQRankSum=0.986;QD=12.71;ReadPosRankSum=-1.166;VQSLOD=3.3798;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:82.71:0,83,632	1/1:1,11:12:30.02:294,30,0	0/0:25,0:22:29.31:0,29,203	0/0:21,0:20:1.31:0,1,107	0/0:23,0:23:47.76:0,48,367	0/0:21,0:21:50.80:0,51,395	0/0:14,0:14:32.85:0,33,255	0/0:32,1:33:38.23:0,38,479	0/0:15,1:16:32.82:0,33,252	1/1:11,14:26:21.68:381,22,0	1/1:9,14:26:28.62:339,29,0	0/0:13,0:13:29.81:0,30,226	0/0:22,0:23:55.10:0,55,423	0/0:14,0:14:29.88:0,30,232	0/0:16,1:17:11.36:0,11,269	0/0:19,0:19:44.80:0,45,347	1/1:5,27:32:63.13:640,63,0	0/0:16,0:16:41.81:0,42,325	0/0:15,1:19:11.69:0,12,244	0/1:20,1:22:8.41:8,0,251	0/0:14,1:15:5.39:0,5,225	0/0:26,2:28:37.30:0,37,463	0/0:18,0:19:46.82:0,47,354	0/0:17,0:17:44.78:0,45,342	1/1:7,12:19:6.82:251,7,0	0/0:19,1:21:7.42:0,7,231	0/0:29,0:28:77.62:0,78,594	0/0:14,0:14:32.85:0,33,255
chr10	72053302	.	T	TG	2934.82	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-5.932;DP=585;FS=0.846;HRun=9;HaplotypeScore=62.0516;InbreedingCoeff=0.8621;MQ=84.16;MQ0=0;MQRankSum=0.313;QD=19.57;ReadPosRankSum=-2.146;VQSLOD=3.1652;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,33:39:61.18:903,61,0	1/1:0,5:5:15.04:166,15,0	0/1:19,0:18:24.13:24,0,174	0/0:25,0:24:25.21:0,25,257	0/0:28,0:28:68.92:0,69,586	0/0:17,0:17:47.97:0,48,411	0/0:21,0:22:58.98:0,59,492	0/0:22,0:22:53.91:0,54,457	0/0:25,0:27:74.01:0,74,628	1/1:10,14:25:45.03:459,45,0	1/1:3,14:18:44.88:449,45,0	0/0:11,0:11:29.99:0,30,260	0/0:17,0:17:44.99:0,45,391	0/0:21,0:21:59.99:0,60,521	0/0:27,0:27:77.97:0,78,673	0/0:22,0:22:53.97:0,54,466	1/1:2,23:27:68.85:724,69,0	0/0:25,0:25:62.97:0,63,544	0/0:19,0:19:41.96:0,42,361	0/0:16,0:17:47.01:0,47,392	0/0:27,0:27:65.87:0,66,555	0/0:17,0:17:44.96:0,45,384	0/0:18,0:18:47.85:0,48,397	0/0:22,0:22:56.96:0,57,489	1/1:3,14:17:36.10:398,36,0	0/0:24,1:25:55.01:0,55,551	0/0:17,0:17:44.93:0,45,380	0/0:9,0:9:2.31:0,2,156
chr10	72053804	.	G	GACAAAGCCTTTGACCTC	32577.55	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=0.619;DP=744;FS=1.475;HRun=0;HaplotypeScore=319.2785;InbreedingCoeff=0.9986;MQ=86.77;MQ0=0;MQRankSum=-18.372;QD=160.48;ReadPosRankSum=0.827;VQSLOD=4.5347;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,7:45:92.64:6234,93,0	0/0:7,0:7:21.07:0,21,961	0/0:24,0:24:55.24:0,55,1961	0/0:33,0:33:78.10:0,78,3081	0/0:24,0:24:63.20:0,63,2937	0/0:11,0:11:33.11:0,33,1562	0/0:31,0:31:84.29:0,84,3677	0/0:30,0:30:84.29:0,84,3381	0/0:36,0:36:99:0,102,4749	0/0:22,0:22:51.17:0,51,2176	0/0:16,0:16:27.09:0,27,1326	1/1:19,20:41:99:8135,111,0	1/1:17,11:34:83.57:6159,84,0	0/0:31,0:31:87.30:0,87,4068	0/0:44,0:44:99:0,129,6064	0/0:32,0:32:90.31:0,90,4222	0/0:43,0:43:99:0,117,4665	1/1:5,4:13:27.05:1923,27,0	0/0:11,0:11:27.09:0,27,1007	0/0:20,0:20:48.16:0,48,2169	0/0:43,0:43:99:0,114,4715	1/1:11,6:19:48.12:2822,48,0	1/1:16,7:27:59.84:3687,60,0	1/1:13,7:24:48.16:3618,48,0	0/0:21,0:21:60.21:0,60,2611	0/0:23,0:23:63.22:0,63,2682	0/0:26,0:26:75.26:0,75,3214	0/0:13,0:13:39.13:0,39,1920
chr10	72054532	.	AG	A	372.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.557;DP=618;FS=16.857;HRun=3;HaplotypeScore=80.9165;InbreedingCoeff=0.9978;MQ=102.19;MQ0=0;MQRankSum=-7.250;QD=17.76;ReadPosRankSum=-1.378;VQSLOD=2.1489;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:57.57:468,58,0	0/0:10,0:10:30.10:0,30,431	0/0:34,0:34:93.62:0,94,1220	0/0:38,0:38:99:0,99,1362	0/0:13,0:13:30.10:0,30,431	0/0:22,0:22:66.22:0,66,951	0/0:25,0:25:75.24:0,75,1059	0/0:30,0:30:87.24:0,87,1210	0/0:23,0:23:63.18:0,63,873	0/0:21,0:21:63.20:0,63,890	0/0:12,0:12:33.10:0,33,457	0/0:17,0:17:48.16:0,48,690	0/0:20,0:20:60.19:0,60,841	0/0:18,0:18:54.18:0,54,770	0/0:31,0:30:90.23:0,90,1253	0/0:15,0:15:45.14:0,45,631	0/0:56,0:56:99:0,166,2346	0/0:25,0:25:72.23:0,72,1019	0/0:18,0:18:48.12:0,48,636	0/0:14,0:14:39.13:0,39,560	0/0:33,0:33:87.75:0,88,1234	0/0:14,0:14:39.10:0,39,522	0/0:21,0:21:54.17:0,54,761	0/0:32,0:32:90.28:0,90,1271	0/0:10,0:10:30.09:0,30,415	0/0:18,0:18:52.99:0,53,739	0/0:16,0:15:48.16:0,48,688	0/0:11,0:11:33.09:0,33,455
chr10	72054537	.	T	TC	184.38	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.484;DP=607;FS=12.850;HRun=1;HaplotypeScore=81.5615;InbreedingCoeff=0.9978;MQ=100.42;MQ0=0;MQRankSum=-6.053;QD=9.70;ReadPosRankSum=-0.940;VQSLOD=-0.1224;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:42.77:279,43,0	0/0:10,0:10:30.08:0,30,375	0/0:31,0:31:83.26:0,83,1063	0/0:37,0:37:99:0,101,1277	0/0:13,0:13:33.11:0,33,428	0/0:23,0:23:69.21:0,69,881	0/0:25,0:25:72.16:0,72,899	0/0:29,0:29:84.26:0,84,1078	0/0:24,0:24:66.21:0,66,856	0/0:18,0:18:54.18:0,54,700	0/0:12,0:12:30.57:0,31,390	0/0:18,0:18:51.17:0,51,662	0/0:21,0:21:57.17:0,57,724	0/0:20,0:20:57.18:0,57,735	0/0:29,0:28:84.27:0,84,1091	0/0:16,0:16:48.16:0,48,623	0/0:54,0:54:99:0,159,2049	0/0:24,0:24:69.22:0,69,896	0/0:17,0:17:48.16:0,48,623	0/0:14,0:14:39.13:0,39,506	0/0:32,0:32:82.48:0,82,1074	0/0:16,0:16:36.12:0,36,467	0/0:19,0:19:51.17:0,51,662	0/0:32,0:32:93.29:0,93,1191	0/0:10,0:10:30.10:0,30,389	0/0:17,0:17:45.13:0,45,561	0/0:16,0:15:45.12:0,45,568	0/0:11,0:11:33.11:0,33,428
chr10	72054541	.	G	GGCCCCTTA	2846.74	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.487;DP=698;FS=17.243;HRun=0;HaplotypeScore=200.3167;InbreedingCoeff=0.9964;MQ=95.22;MQ0=0;MQRankSum=-7.332;QD=74.91;ReadPosRankSum=-1.653;VQSLOD=2.3645;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,19:38:81.15:2942,81,0	0/0:9,0:9:27.09:0,27,801	0/0:29,0:29:78.85:0,79,2219	0/0:39,0:39:92.15:0,92,2944	0/0:23,0:23:30.02:0,30,904	0/0:27,0:27:72.15:0,72,2024	0/0:21,0:21:63.20:0,63,1763	0/0:33,0:33:90.29:0,90,2499	0/0:25,0:25:72.20:0,72,1995	0/0:23,0:23:48.16:0,48,1387	0/0:15,0:15:30.10:0,30,864	0/0:24,0:24:54.17:0,54,1564	0/0:19,0:19:57.20:0,57,1602	0/0:23,0:23:57.20:0,57,1716	0/0:36,0:35:87.28:0,87,2564	0/0:22,0:22:51.16:0,51,1478	0/0:52,0:52:99:0,157,4578	0/0:25,0:25:72.20:0,72,2067	0/0:19,0:19:48.16:0,48,1432	0/0:20,0:20:39.13:0,39,1160	0/0:37,0:37:84.29:0,84,2464	0/0:24,0:24:36.12:0,36,1046	0/0:22,0:22:51.16:0,51,1387	0/0:30,0:30:87.30:0,87,2570	0/0:13,0:13:27.09:0,27,814	0/0:20,0:20:39.12:0,39,1017	0/0:19,0:18:45.15:0,45,1280	0/0:11,0:11:33.11:0,33,995
chr10	72055130	.	A	ACCC	786.21	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.359;DP=404;FS=0.944;HRun=7;HaplotypeScore=64.5731;InbreedingCoeff=0.8926;MQ=93.04;MQ0=0;MQRankSum=-3.881;QD=43.68;ReadPosRankSum=-1.270;VQSLOD=3.1464;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:45.15:0,45,613	0/0:7,0:7:18.06:0,18,246	0/0:21,0:21:48.15:0,48,651	0/0:23,0:24:54.01:0,54,717	0/0:8,0:8:21.07:0,21,287	0/0:20,0:20:51.14:0,51,680	0/0:17,0:17:51.13:0,51,672	0/0:23,0:23:57.17:0,57,778	0/0:10,0:10:27.08:0,27,367	0/0:14,0:14:36.08:0,36,471	0/0:16,0:16:48.16:0,48,654	0/0:5,0:5:12.04:0,12,164	0/0:7,0:7:21.07:0,21,287	0/0:14,0:14:39.13:0,39,532	0/0:13,0:13:36.12:0,36,490	0/0:9,0:9:24.08:0,24,327	0/0:27,0:27:63.20:0,63,859	1/1:8,10:18:48.16:881,48,0	0/0:12,0:12:27.06:0,27,353	0/0:18,0:18:39.12:0,39,532	0/0:18,0:17:42.10:0,42,556	0/0:13,0:13:33.07:0,33,450	0/0:14,0:14:33.09:0,33,450	0/0:20,0:20:48.14:0,48,652	0/0:9,0:9:18.03:0,18,244	0/0:17,0:17:48.16:0,48,654	0/0:9,0:9:24.05:0,24,310	0/0:3,0:3:9.03:0,9,118
chr10	72055179	.	T	TAC	400.22	PASS	AB=0.920;AC=8;AF=0.160;AN=50;BaseQRankSum=-2.333;DP=411;FS=1.074;HRun=0;HaplotypeScore=81.3471;InbreedingCoeff=0.1300;MQ=69.06;MQ0=10;MQRankSum=2.043;QD=5.07;ReadPosRankSum=-1.211;VQSLOD=2.4385;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:20:7.02:0,7,72	1/1:6,0:6:0.89:2,1,0	./.	0/0:27,0:15:0.89:0,1,2	0/0:7,0:9:11.83:0,12,93	0/0:17,0:17:11.22:0,11,93	0/0:18,0:18:20.96:0,21,186	0/0:21,0:20:5.42:0,5,36	0/0:11,0:11:5.93:0,6,62	0/0:12,0:12:13.06:0,13,67	0/0:15,0:15:4.88:0,5,20	0/0:10,0:10:8.52:0,9,42	0/0:8,0:8:2.84:0,3,14	0/0:8,0:8:3.01:0,3,32	0/0:11,0:12:11.55:0,12,102	0/0:9,0:9:14.87:0,15,143	0/0:26,0:26:17.30:0,17,99	0/0:11,0:15:11.48:0,11,61	0/0:12,0:11:5.90:0,6,48	1/1:14,1:15:11.88:135,12,0	0/1:21,1:20:23.60:88,0,24	0/0:18,0:18:3.30:0,3,15	./.	./.	0/0:12,0:15:12.32:0,12,79	0/1:11,4:15:25.72:182,0,26	0/1:13,1:14:23.14:60,0,23	0/1:7,0:6:53.09:53,0,73
chr10	72055215	.	CACACACACACAT	C	2512.37	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=8.199;DP=451;FS=0.989;HRun=0;HaplotypeScore=148.2285;InbreedingCoeff=0.7743;MQ=51.34;MQ0=19;MQRankSum=0.822;QD=14.19;ReadPosRankSum=-2.474;VQSLOD=2.2921;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:51.51:0,52,686	1/1:6,0:6:13.78:126,14,0	1/1:6,0:1:2.50:9,2,0	0/0:8,0:1:2.80:0,3,13	0/0:15,0:15:33.05:0,33,845	0/0:17,0:17:45.10:0,45,1372	0/0:13,0:13:36.12:0,36,1348	0/0:27,0:25:69.36:0,69,983	0/0:13,0:12:24.08:0,24,1161	1/1:18,1:18:39.46:521,39,0	1/1:16,0:16:25.80:245,26,0	1/1:1,11:12:9.03:342,9,0	1/1:1,6:7:3.01:113,3,0	0/0:6,0:5:5.20:0,5,165	0/0:12,0:12:21.04:0,21,771	0/0:12,0:12:27.09:0,27,1248	1/1:41,0:41:44.13:518,44,0	0/1:18,0:17:99:115,0,229	0/0:14,0:12:35.34:0,35,906	0/0:14,0:13:27.05:0,27,1017	0/0:25,0:22:45.07:0,45,1331	1/1:3,10:12:6.27:223,6,0	0/0:3,13:15:0.47:0,0,1	1/1:12,0:11:12.43:94,12,0	1/1:27,0:26:27.37:405,27,0	0/0:25,0:23:69.19:0,69,2423	0/0:14,0:14:30.05:0,30,1208	0/0:12,0:10:25.28:0,25,1028
chr10	72055217	.	CACACACACAT	C	4169.92	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=5.960;DP=450;FS=3.364;HRun=0;HaplotypeScore=131.3111;InbreedingCoeff=0.7116;MQ=51.55;MQ0=18;MQRankSum=0.342;QD=20.05;ReadPosRankSum=-2.078;VQSLOD=2.5673;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:12.66:13,0,381	1/1:5,1:6:14.97:193,15,0	1/1:6,0:1:2.50:9,2,0	0/0:6,0:1:2.80:0,3,13	0/0:15,0:15:33.05:0,33,659	0/0:17,0:17:45.07:0,45,1105	0/0:13,0:13:36.10:0,36,1063	0/0:26,0:24:69.36:0,69,868	0/0:13,0:12:24.08:0,24,943	1/1:17,2:18:50.90:821,51,0	1/1:15,2:17:27:377,27,0	1/1:12,0:12:9.03:242,9,0	1/1:7,0:7:3.01:80,3,0	0/0:7,0:6:8.22:0,8,156	0/0:12,0:12:21.03:0,21,637	0/0:12,0:12:27.08:0,27,1043	1/1:38,3:41:97.74:1066,98,0	0/1:17,0:16:99:202,0,186	0/0:14,0:12:34.78:0,35,756	0/0:14,0:13:27.05:0,27,862	0/0:24,0:21:42.09:0,42,1042	1/1:13,0:12:6:156,6,0	0/0:16,0:15:0.47:0,0,1	1/1:12,0:11:10.02:72,10,0	1/1:26,2:28:59.95:939,60,0	0/0:25,0:23:69.17:0,69,1979	0/0:16,0:16:36.04:0,36,1076	0/0:12,0:10:24.97:0,25,871
chr10	72055256	.	GT	G	2285.09	PASS	AB=0.944;AC=12;AF=0.214;AN=56;BaseQRankSum=7.357;DP=468;FS=1.933;HRun=10;HaplotypeScore=80.0567;InbreedingCoeff=0.7430;MQ=69.47;MQ0=0;MQRankSum=0.052;QD=16.09;ReadPosRankSum=2.923;VQSLOD=4.2696;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:64.77:0,65,343	1/1:0,5:5:15:130,15,0	0/1:14,2:15:26:26,0,149	0/1:12,0:10:7.90:8,0,141	0/0:22,0:22:63.08:0,63,672	0/0:17,0:17:48.13:0,48,530	0/0:16,0:16:42.08:0,42,445	0/0:25,0:25:57.15:0,57,630	0/0:12,0:12:27.07:0,27,299	1/1:2,16:18:47.97:413,48,0	1/1:3,14:17:28.05:325,28,0	0/0:11,0:11:18.05:0,18,199	0/0:8,0:8:15.04:0,15,166	0/0:8,0:8:18.52:0,19,200	0/0:9,0:10:23.90:0,24,247	0/0:8,0:8:21:0,21,204	1/1:5,38:43:98.96:859,99,0	0/0:4,0:22:48.43:0,48,248	0/0:19,0:19:48.13:0,48,529	0/0:16,1:18:21.89:0,22,434	0/0:13,0:13:30.08:0,30,332	0/0:5,0:5:5.81:0,6,66	0/0:14,0:14:21.06:0,21,232	0/0:9,0:9:24.06:0,24,266	1/1:1,30:31:80.98:703,81,0	0/0:28,1:29:46.14:0,46,737	0/0:12,1:14:3.86:0,4,254	0/0:10,0:10:27.07:0,27,299
chr10	72055257	.	T	TTTG	1827.11	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.646;DP=477;FS=17.463;HRun=0;HaplotypeScore=102.6613;InbreedingCoeff=0.9229;MQ=70.09;MQ0=0;MQRankSum=-2.870;QD=48.08;ReadPosRankSum=-0.905;VQSLOD=4.3390;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,34:38:99:1922,99,0	0/0:6,0:6:15.03:0,15,150	0/0:17,0:16:22.24:0,22,439	0/0:12,0:10:20.95:0,21,275	0/0:22,0:22:65.95:0,66,1042	0/0:18,0:18:51.16:0,51,834	0/0:16,0:16:48.13:0,48,724	0/0:25,0:25:69.20:0,69,1077	0/0:11,0:11:33.09:0,33,510	0/0:18,0:18:49.34:0,49,481	0/0:17,0:17:48.02:0,48,476	0/0:11,0:11:21.03:0,21,326	0/0:8,0:8:18.03:0,18,276	0/0:8,0:8:18.53:0,19,306	0/0:11,0:11:29.92:0,30,425	0/0:8,0:8:21.06:0,21,315	0/0:44,0:44:99:0,107,1062	0/0:23,0:23:48.29:0,48,251	0/0:18,0:18:51.16:0,51,842	0/0:19,0:19:53.98:0,54,766	0/0:13,0:13:36.11:0,36,564	0/0:5,0:5:11.95:0,12,142	0/0:14,0:14:24.03:0,24,376	0/0:10,0:10:23.97:0,24,408	0/0:32,0:32:84.13:0,84,827	0/0:29,0:29:87.26:0,87,1342	0/0:14,0:14:38.89:0,39,523	0/0:10,0:10:30.09:0,30,483
chr10	72055784	.	GGTGT	G	666.51	PASS	AB=0.887;AC=10;AF=0.208;AN=48;BaseQRankSum=3.203;DP=525;FS=3.136;HRun=0;HaplotypeScore=106.4913;InbreedingCoeff=0.1754;MQ=65.06;MQ0=4;MQRankSum=2.121;QD=3.88;ReadPosRankSum=2.353;VQSLOD=2.1505;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:10,0:11:12.04:0,12,240	./.	./.	0/0:19,0:19:11.05:0,11,289	0/0:14,0:14:24.08:0,24,498	0/0:19,0:19:29.84:0,30,646	0/0:22,0:22:8.31:0,8,78	0/1:18,1:20:20.21:20,0,453	0/0:22,0:22:33.11:0,33,515	./.	0/1:12,0:17:32.89:33,0,38	0/1:12,1:14:15.52:38,0,16	0/1:20,1:21:20.05:20,0,427	0/0:17,0:20:29.06:0,29,426	0/1:24,1:24:13.92:14,0,592	0/0:11,0:18:2.84:0,3,9	0/0:12,0:18:20.45:0,20,242	0/0:13,0:13:13.86:0,14,236	0/0:13,0:13:15.04:0,15,309	0/0:45,0:45:29.89:0,30,606	0/0:23,2:28:19.63:0,20,156	1/1:13,3:16:5.88:94,6,0	1/1:20,17:36:36.12:563,36,0	0/0:14,0:19:20.80:0,21,337	0/0:16,0:18:25.98:0,26,331	0/1:18,1:21:26.49:26,0,250	0/0:9,0:9:17.78:0,18,282
chr10	72057166	.	CA	C	5671.19	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.089;DP=738;FS=2.625;HRun=8;HaplotypeScore=77.0558;InbreedingCoeff=0.9842;MQ=68.73;MQ0=7;MQRankSum=-1.253;QD=23.83;ReadPosRankSum=2.584;VQSLOD=5.7499;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:61,1:61:99:0,162,1917	1/1:0,14:14:39.06:377,39,0	0/0:31,1:18:24.55:0,25,406	0/0:48,0:34:42.74:0,43,607	0/0:17,0:17:48.15:0,48,580	0/0:21,0:21:63.18:0,63,751	0/0:31,0:31:83.29:0,83,983	0/0:18,0:18:49.93:0,50,561	0/0:19,0:19:51.15:0,51,606	1/1:3,27:30:81.13:782,81,0	1/1:1,17:18:48.07:462,48,0	1/1:0,28:28:75.12:724,75,0	1/1:2,19:21:48.08:464,48,0	0/0:23,1:24:31.21:0,31,659	0/0:34,0:34:99:0,102,1209	0/0:30,0:30:81.24:0,81,967	1/1:2,26:28:66.11:637,66,0	0/0:26,0:26:75.15:0,75,887	0/0:25,0:24:66.19:0,66,786	0/0:22,0:22:63.19:0,63,761	0/0:21,0:21:57.16:0,57,674	1/1:4,18:22:51.07:492,51,0	1/1:2,21:23:51.08:491,51,0	1/1:4,31:35:89.88:852,90,0	1/1:2,17:19:41.90:391,42,0	0/0:33,1:32:67.30:0,67,1083	0/0:32,0:32:81.25:0,81,977	0/0:2,0:2:6.02:0,6,72
chr10	72057595	.	AAGCATAGAGGAGTCGT	A	7301.59	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=11.689;DP=648;FS=1.137;HRun=0;HaplotypeScore=275.1214;InbreedingCoeff=0.9157;MQ=87.05;MQ0=0;MQRankSum=-11.710;QD=43.20;ReadPosRankSum=2.628;VQSLOD=4.1443;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,17:36:30.10:1336,30,0	0/0:12,0:12:30.10:0,30,2002	0/0:24,0:24:33.10:0,33,1860	0/0:25,0:25:48.16:0,48,2567	0/0:14,0:14:24.08:0,24,1704	0/0:24,0:24:45.15:0,45,3196	0/0:35,0:35:75.26:0,75,4974	0/0:19,0:19:27.09:0,27,1332	0/0:33,0:33:87.30:0,87,5799	0/0:23,0:23:51.18:0,51,3010	0/0:8,0:8:21.07:0,21,1303	1/1:11,12:23:39.13:1737,39,0	1/1:8,16:24:39.13:1737,39,0	0/1:20,0:20:1.70:2,0,3164	0/0:31,0:31:66.23:0,66,4617	0/0:22,0:22:60.21:0,60,4481	0/0:39,0:39:87.30:0,87,6168	1/1:15,9:24:21.07:935,21,0	0/0:26,0:26:48.16:0,48,2602	0/0:14,0:14:30.10:0,30,1520	0/0:51,0:51:99:0,102,6831	1/1:6,6:12:11.89:519,12,0	1/1:3,7:10:6.02:268,6,0	1/1:11,9:20:18.06:769,18,0	0/0:20,0:20:48.16:0,48,3020	0/0:23,0:23:51.18:0,51,3614	0/0:22,0:21:60.19:0,60,4077	0/0:14,0:14:33.11:0,33,2203
chr10	72058454	.	TGATAGATAGATAGATA	T	509.06	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=4.796;DP=310;FS=2.105;HRun=0;HaplotypeScore=138.3930;InbreedingCoeff=0.7585;MQ=56.42;MQ0=1;MQRankSum=-2.511;QD=12.12;ReadPosRankSum=-2.677;VQSLOD=2.1951;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:13:9.46:0,9,513	0/0:5,0:5:15.05:0,15,868	0/0:10,0:10:3.01:0,3,47	./.	0/0:4,0:10:18.06:0,18,741	0/0:12,0:12:33.11:0,33,1853	0/0:8,0:7:9.03:0,9,467	0/0:17,0:16:30.09:0,30,1087	0/0:9,0:9:24.08:0,24,1273	0/0:8,0:11:21.07:0,21,887	0/0:8,0:12:15.05:0,15,545	1/1:3,7:10:6.02:264,6,0	1/1:4,9:13:8.86:172,9,0	0/0:4,0:4:6.02:0,6,400	0/0:10,0:10:24.08:0,24,1561	0/0:7,0:11:21.07:0,21,1344	0/0:18,0:19:39.13:0,39,2331	0/0:13,0:20:18.03:0,18,256	0/0:7,0:7:12.04:0,12,350	0/0:13,0:13:27.09:0,27,1399	0/0:10,0:10:27.09:0,27,1775	1/1:4,10:14:14.75:100,15,0	1/1:5,0:5:6.02:110,6,0	0/0:6,4:10:0:0,0,0	0/0:10,0:12:27.09:0,27,1239	0/0:10,0:10:12.04:0,12,730	0/0:12,0:12:36.12:0,36,1856	0/0:15,0:15:33.11:0,33,1997
chr10	72059546	.	CT	C	4360.82	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.254;DP=770;FS=2.159;HRun=2;HaplotypeScore=75.9413;InbreedingCoeff=0.9989;MQ=92.39;MQ0=0;MQRankSum=-2.741;QD=34.34;ReadPosRankSum=1.572;VQSLOD=5.2499;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,175,2543	0/0:7,0:7:21.07:0,21,315	0/0:34,0:34:99:0,99,1453	0/0:30,0:30:78.20:0,78,1104	0/0:31,0:31:84.26:0,84,1217	0/0:20,0:20:60.20:0,60,890	0/0:25,0:25:75.24:0,75,1101	0/0:26,0:26:78.23:0,78,1082	0/0:39,0:39:99:0,114,1708	0/0:33,0:33:96.31:0,96,1406	0/0:28,0:28:84.25:0,84,1235	1/1:0,23:23:57.19:740,57,0	1/1:1,29:30:75.24:973,75,0	0/0:25,0:25:75.25:0,75,1123	0/0:30,0:30:87.29:0,87,1304	0/0:40,0:40:99:0,117,1727	0/0:26,0:26:75.24:0,75,1097	0/0:21,0:21:63.21:0,63,944	0/0:22,0:22:60.20:0,60,899	0/0:29,0:29:81.26:0,81,1194	0/0:40,0:40:99:0,117,1711	1/1:0,22:22:57.19:740,57,0	1/1:0,19:19:57.19:740,57,0	1/1:0,33:33:90.29:1168,90,0	0/0:22,0:22:60.20:0,60,899	0/0:26,0:26:78.26:0,78,1159	0/0:20,0:20:60.20:0,60,895	0/0:11,0:11:30.10:0,30,450
chr10	72059790	.	TTC	T	399.15	PASS	AB=0.935;AC=21;AF=0.420;AN=50;BaseQRankSum=4.348;DP=496;FS=8.056;HRun=0;HaplotypeScore=91.1059;InbreedingCoeff=-0.1289;MQ=73.34;MQ0=7;MQRankSum=-0.091;QD=1.32;ReadPosRankSum=-0.489;VQSLOD=1.0861;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:2.99:0,3,23	0/1:8,2:10:4.02:27,0,4	./.	0/1:31,0:23:0.15:0,0,0	0/0:18,0:19:4.82:0,5,32	0/0:24,0:24:5.06:0,5,346	0/0:18,0:20:6.95:0,7,223	0/0:36,0:35:8.91:0,9,74	0/1:14,1:15:40.96:41,0,182	0/1:13,1:16:4.81:76,0,5	1/1:10,4:13:3.89:34,4,0	0/0:17,0:16:6.02:0,6,86	0/1:20,0:18:36.64:37,0,37	0/0:16,2:18:18.04:0,18,243	0/1:17,2:17:17.99:18,0,110	0/1:11,1:12:20.57:21,0,121	0/1:17,3:19:48.80:49,0,87	1/1:14,0:18:11.36:56,11,0	0/1:23,1:22:20.54:21,0,80	0/1:26,1:27:14.59:15,0,176	0/1:17,0:17:6.60:9,0,7	./.	1/1:16,0:16:3.45:19,3,0	0/0:13,0:13:3.64:0,4,43	1/1:10,5:15:6.01:62,6,0	0/1:17,0:15:14.24:14,0,44	0/1:10,1:9:46.97:47,0,116	./.
chr10	72059923	.	G	GTA	6180.58	PASS	AB=0.533;AC=11;AF=0.196;AN=56;BaseQRankSum=-7.370;DP=670;FS=10.068;HRun=0;HaplotypeScore=88.0099;InbreedingCoeff=0.9192;MQ=66.31;MQ0=1;MQRankSum=1.071;QD=42.04;ReadPosRankSum=0.312;VQSLOD=6.1661;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:30:65.52:1130,66,0	0/0:14,0:13:42.14:0,42,552	0/0:17,0:12:14.59:0,15,124	0/0:21,0:17:6.96:0,7,88	0/0:43,0:43:99:0,108,1402	0/0:23,0:23:63.19:0,63,812	0/0:20,0:20:54.14:0,54,677	0/0:42,0:42:99:0,108,1346	0/0:27,0:27:69.22:0,69,906	0/0:29,0:29:78.25:0,78,1025	0/0:27,0:26:72.21:0,72,917	1/1:1,16:17:39.13:668,39,0	0/1:2,14:16:0.29:578,0,0	0/0:14,0:14:36.12:0,36,473	0/0:24,0:24:60.18:0,60,774	0/0:12,0:12:36.12:0,36,473	0/0:29,0:29:69.18:0,69,873	0/0:24,0:24:60.19:0,60,788	0/0:16,0:16:42.12:0,42,537	0/0:35,0:35:93.29:0,93,1205	0/0:18,0:18:45.12:0,45,567	1/1:1,30:31:81.28:1389,81,0	1/1:1,20:21:57.20:977,57,0	1/1:1,31:32:84.29:1439,84,0	0/0:22,0:22:54.16:0,54,694	0/0:26,0:26:63.20:0,63,827	0/0:30,0:30:90.25:0,90,1149	0/0:7,0:7:15.05:0,15,196
chr10	72063265	.	T	TACAC	1150.47	PASS	AB=0.871;AC=16;AF=0.333;AN=48;BaseQRankSum=1.757;DP=671;FS=4.437;HRun=0;HaplotypeScore=116.5534;InbreedingCoeff=0.4814;MQ=50.90;MQ0=42;MQRankSum=-1.507;QD=5.96;ReadPosRankSum=-1.229;VQSLOD=2.3511;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:3.21:0,3,28	1/1:6,0:6:5.98:85,6,0	./.	./.	0/0:21,0:22:6.02:0,6,92	./.	0/1:29,0:29:2.15:2,0,83	0/0:33,0:30:11.92:0,12,89	0/0:23,0:27:21.53:0,22,287	1/1:19,0:18:15.03:262,15,0	1/1:12,0:12:6.02:101,6,0	1/1:17,2:25:17.52:302,18,0	1/1:9,0:14:2.72:12,3,0	0/0:13,0:15:15:0,15,186	0/0:22,0:22:42.11:0,42,605	0/0:22,0:24:38.95:0,39,524	0/1:15,2:23:27.60:226,0,28	0/0:14,0:20:11.93:0,12,92	0/0:11,0:11:2.63:0,3,21	0/0:24,0:24:14.79:0,15,231	0/0:44,0:42:9.33:0,9,95	1/1:9,3:16:8.76:113,9,0	0/0:5,1:7:0.88:0,1,2	0/1:25,10:39:15.98:198,0,16	0/0:9,2:11:2.97:0,3,21	0/0:23,0:22:13.18:0,13,157	0/1:8,0:8:0.03:0,0,0	./.
chr10	72065285	.	TGG	T	1743.17	PASS	AB=0.833;AC=20;AF=0.370;AN=54;BaseQRankSum=2.160;DP=311;FS=3.021;HRun=12;HaplotypeScore=51.1901;InbreedingCoeff=0.6081;MQ=89.03;MQ0=1;MQRankSum=1.128;QD=12.36;ReadPosRankSum=6.284;VQSLOD=1.2718;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,9:24:33.01:322,33,0	./.	0/1:14,0:14:11.87:30,0,12	0/0:22,1:18:3.17:0,3,102	0/0:8,0:8:5.37:0,5,69	0/0:7,0:8:7.99:0,8,43	0/0:14,0:15:32.55:0,33,371	0/0:10,0:10:3.01:0,3,41	0/0:6,0:6:11.53:0,12,142	1/1:5,4:9:11.99:122,12,0	1/1:3,3:6:9.01:91,9,0	1/1:10,5:15:11.54:251,12,0	1/1:4,5:10:2.04:164,2,0	0/0:9,0:9:6.02:0,6,87	0/0:8,0:8:8.59:0,9,129	0/0:14,0:16:3.06:0,3,198	1/1:11,13:26:47.40:448,47,0	0/0:10,0:11:9.03:0,9,114	0/0:12,0:12:6:0,6,66	0/0:5,0:5:6.02:0,6,81	0/0:13,0:15:14.49:0,14,126	1/1:3,0:4:8.74:69,9,0	1/1:2,8:10:11.47:121,11,0	0/1:6,6:12:0.98:134,0,1	1/1:7,4:11:18:172,18,0	0/0:9,0:9:3.01:0,3,43	0/0:11,0:11:21.14:0,21,175	0/0:2,0:2:5.99:0,6,48
chr10	72065669	.	C	CCTGTCCAGGAAATCAGGTGGCCCACA	1753	PASS	AB=0.707;AC=22;AF=0.917;AN=24;BaseQRankSum=-1.797;DP=47;FS=6.085;HRun=0;HaplotypeScore=39.4925;InbreedingCoeff=-0.2049;MQ=127.01;MQ0=0;MQRankSum=-1.383;QD=44.95;ReadPosRankSum=-0.138;VQSLOD=0.6363;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:6:8.97:92,9,0	1/1:1,0:1:3.01:76,3,0	0/1:4,1:7:63.95:552,0,64	0/1:3,0:5:5.51:165,0,6	./.	./.	./.	1/1:3,0:3:9.01:182,9,0	./.	./.	./.	./.	1/1:1,0:1:3.01:73,3,0	./.	1/1:4,0:4:3.01:105,3,0	1/1:3,0:4:11.98:242,12,0	./.	./.	1/1:1,0:1:3.01:86,3,0	./.	1/1:2,0:3:6.02:185,6,0	./.	./.	./.	1/1:2,0:2:5.99:59,6,0	./.	1/1:2,0:2:2.97:20,3,0	./.
chr10	72066586	.	A	AG	15374.41	PASS	AB=0.789;AC=54;AF=0.964;AN=56;BaseQRankSum=-4.257;DP=477;FS=12.644;HRun=1;HaplotypeScore=111.5340;InbreedingCoeff=-0.0389;MQ=81.36;MQ0=0;MQRankSum=-7.195;QD=32.23;ReadPosRankSum=4.541;VQSLOD=3.2923;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,13:24:54.17:739,54,0	1/1:11,0:11:30.10:406,30,0	0/1:15,6:21:99:203,0,150	0/1:12,4:16:98.33:151,0,98	1/1:14,3:17:45.08:529,45,0	1/1:11,3:14:42.13:565,42,0	1/1:11,4:15:36.11:479,36,0	1/1:4,14:18:45.15:622,45,0	1/1:13,5:18:45.14:599,45,0	1/1:13,2:15:36.12:514,36,0	1/1:7,1:8:15.05:202,15,0	1/1:15,2:17:39.11:488,39,0	1/1:9,2:11:27.02:338,27,0	1/1:11,3:14:35.79:399,36,0	1/1:31,4:35:96.26:1252,96,0	1/1:15,5:20:51.15:677,51,0	1/1:20,8:29:84.19:1177,84,0	1/1:13,5:18:51.17:721,51,0	1/1:15,10:25:69.23:991,69,0	1/1:14,4:18:51.15:686,51,0	1/1:5,2:7:12.04:179,12,0	1/1:12,4:16:36.12:513,36,0	1/1:9,3:12:27.55:336,28,0	1/1:12,3:15:33.10:425,33,0	1/1:7,5:12:27.04:334,27,0	1/1:17,4:21:57.19:821,57,0	1/1:17,1:18:44.71:546,45,0	1/1:12,0:12:33.11:483,33,0
chr10	72066590	.	CT	C	12131.08	PASS	AB=0.774;AC=54;AF=0.964;AN=56;BaseQRankSum=0.039;DP=461;FS=9.830;HRun=3;HaplotypeScore=115.2138;InbreedingCoeff=-0.0390;MQ=80.71;MQ0=0;MQRankSum=-6.737;QD=26.31;ReadPosRankSum=4.109;VQSLOD=3.4226;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,13:25:54.12:598,54,0	1/1:10,1:11:33.08:365,33,0	0/1:14,6:20:99:132,0,116	0/1:10,4:14:99:105,0,105	1/1:14,4:18:44.99:438,45,0	1/1:10,2:12:36.07:384,36,0	1/1:10,5:15:36.07:392,36,0	1/1:2,16:18:48.14:551,48,0	1/1:14,4:18:48.02:501,48,0	1/1:13,3:16:33.08:384,33,0	1/1:5,2:7:15.03:163,15,0	1/1:13,3:16:36.01:350,36,0	1/1:7,2:9:23.72:243,24,0	1/1:11,3:14:37.47:344,37,0	1/1:31,3:34:93.14:979,93,0	1/1:17,2:19:48.06:512,48,0	1/1:25,4:29:81.18:921,81,0	1/1:16,3:19:48.14:566,48,0	1/1:13,9:22:60.17:694,60,0	1/1:14,4:18:48.01:515,48,0	1/1:3,2:5:12.04:148,12,0	1/1:12,3:15:33.08:383,33,0	1/1:8,3:11:22.66:259,23,0	1/1:12,2:14:36.03:377,36,0	1/1:6,5:11:27.02:290,27,0	1/1:18,3:21:57.14:660,57,0	1/1:15,1:17:42.88:436,43,0	1/1:12,1:13:36.11:442,36,0
chr10	72066634	.	CT	C	695.22	PASS	AB=0.938;AC=3;AF=0.054;AN=56;BaseQRankSum=2.906;DP=512;FS=1.258;HRun=11;HaplotypeScore=109.0180;InbreedingCoeff=0.5399;MQ=66.95;MQ0=0;MQRankSum=0.876;QD=12.64;ReadPosRankSum=1.329;VQSLOD=3.5048;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,36:40:95.87:788,96,0	0/0:13,0:13:27.06:0,27,282	0/0:12,0:12:4.61:0,5,89	0/1:14,1:15:7.81:8,0,107	0/0:18,1:19:20.44:0,20,411	0/0:15,0:15:42.11:0,42,448	0/0:19,0:19:45.07:0,45,467	0/0:20,1:21:23.48:0,23,455	0/0:14,0:14:24.05:0,24,249	0/0:15,0:15:27.06:0,27,283	0/0:15,0:15:42.03:0,42,423	0/0:23,1:24:26.50:0,26,487	0/0:13,0:14:26.18:0,26,302	0/0:15,0:15:36.09:0,36,383	0/0:22,1:23:35.46:0,35,570	0/0:14,0:15:35.92:0,36,365	0/0:28,1:29:45.59:0,46,704	0/0:12,0:13:35.90:0,36,356	0/0:29,1:33:47:0,47,646	0/0:20,0:20:48.07:0,48,493	0/0:10,0:10:30.08:0,30,320	0/0:6,1:9:2.27:0,2,213	0/0:18,0:19:44.91:0,45,450	0/0:16,0:17:41.94:0,42,430	0/0:16,0:16:42.07:0,42,435	0/0:20,0:21:41.81:0,42,413	0/0:20,0:19:48.08:0,48,499	0/0:16,0:16:39.07:0,39,400
chr10	72067190	.	TA	T	3493.77	PASS	AB=0.881;AC=25;AF=0.446;AN=56;BaseQRankSum=8.552;DP=530;FS=9.591;HRun=11;HaplotypeScore=64.0479;InbreedingCoeff=0.7599;MQ=74.00;MQ0=1;MQRankSum=0.094;QD=14.20;ReadPosRankSum=2.716;VQSLOD=3.4292;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,19:26:21.09:368,21,0	1/1:3,6:9:17.97:148,18,0	0/1:18,2:19:19.15:19,0,55	0/1:16,0:14:4.31:4,0,61	0/0:23,1:24:41.52:0,42,647	0/0:11,0:11:33.08:0,33,352	0/0:11,1:12:8.64:0,9,286	0/0:23,0:23:60.15:0,60,639	0/0:21,0:21:48.12:0,48,512	1/1:2,19:21:56.93:468,57,0	1/1:3,14:17:41.95:345,42,0	1/1:3,13:16:34.20:274,34,0	1/1:1,10:11:17.98:148,18,0	0/0:15,0:16:35.92:0,36,365	0/0:22,0:21:48.12:0,48,511	0/0:21,1:23:44.31:0,44,635	1/1:3,21:23:27.98:436,28,0	0/0:22,0:22:38.53:0,39,611	0/0:17,1:19:0.93:0,1,296	0/0:23,1:25:32.31:0,32,518	0/0:10,0:10:24.06:0,24,256	1/1:5,17:23:43.97:351,44,0	1/1:4,8:12:23.96:197,24,0	1/1:3,16:19:44.93:369,45,0	1/1:3,17:20:41.94:345,42,0	0/0:26,0:26:63.14:0,63,658	0/0:29,1:30:50.53:0,51,736	0/1:7,2:9:22.24:22,0,188
chr10	72067230	.	GGTGTGTGT	G	855.38	PASS	AB=0.923;AC=14;AF=0.250;AN=56;BaseQRankSum=4.441;DP=549;FS=11.755;HRun=0;HaplotypeScore=156.5475;InbreedingCoeff=0.5399;MQ=64.97;MQ0=9;MQRankSum=-5.510;QD=5.98;ReadPosRankSum=1.223;VQSLOD=2.2469;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:3.01:0,3,72	0/0:9,0:10:15.02:0,15,202	0/0:35,0:27:6.02:0,6,75	0/0:27,0:15:3.01:0,3,43	1/1:19,0:23:6.02:112,6,0	0/0:12,0:12:15.52:0,16,484	0/0:16,0:16:20.80:0,21,721	0/0:31,0:30:15.04:0,15,363	0/0:18,0:18:42.10:0,42,1442	0/1:15,0:16:20.77:21,0,148	0/0:19,0:17:6.02:0,6,111	1/1:11,6:17:18.06:446,18,0	1/1:7,2:12:11.93:202,12,0	0/0:13,0:13:15.80:0,16,586	0/0:22,0:23:45.12:0,45,1229	0/0:18,0:20:21.04:0,21,632	0/0:17,0:24:5.06:0,5,131	0/0:19,0:22:17.99:0,18,249	0/0:21,0:21:13.29:0,13,418	0/0:14,0:14:15.05:0,15,423	0/0:28,0:26:30.57:0,31,873	1/1:14,2:15:3.01:75,3,0	1/1:9,1:10:3.01:75,3,0	1/1:22,7:30:3.01:75,3,0	0/1:17,0:19:9.95:10,0,19	0/0:17,0:20:9.01:0,9,190	0/0:16,0:17:9.03:0,9,308	0/0:15,0:14:21.05:0,21,706
chr10	72067515	.	C	CTGTG	11528.99	PASS	AB=0.574;AC=21;AF=0.375;AN=56;BaseQRankSum=-2.296;DP=1129;FS=4.497;HRun=0;HaplotypeScore=220.5514;InbreedingCoeff=0.9168;MQ=59.70;MQ0=5;MQRankSum=-0.138;QD=27.92;ReadPosRankSum=4.165;VQSLOD=4.4615;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,27:39:60.16:1487,60,0	1/1:6,0:15:21.96:99,22,0	0/0:42,0:34:51.30:0,51,834	0/0:48,0:32:5.22:0,5,572	0/0:19,0:20:54.18:0,54,878	0/0:38,0:39:91.05:0,91,1598	0/0:34,0:37:84.24:0,84,1306	0/0:60,0:60:99:0,129,2086	0/0:68,0:69:99:0,169,2780	1/1:20,0:59:34.81:425,35,0	1/1:8,0:30:52.15:236,52,0	1/1:7,32:43:83.49:1887,83,0	1/1:24,32:56:81.27:1943,81,0	0/0:42,0:45:99:0,102,1662	0/0:61,0:62:99:0,163,2613	0/0:48,0:49:99:0,114,1837	1/1:10,0:27:6.84:210,7,0	0/0:25,0:25:54.14:0,54,858	0/0:30,0:26:36.08:0,36,570	0/0:32,0:32:78.01:0,78,1214	0/0:65,0:65:99:0,129,2074	1/1:11,23:35:53.88:1277,54,0	1/1:4,30:35:74.83:1797,75,0	1/1:8,32:45:80.35:2015,80,0	0/1:7,0:26:3.45:152,0,3	0/0:47,0:47:99:0,111,1735	0/0:29,0:29:81.25:0,81,1307	0/0:15,0:15:33.11:0,33,554
chr10	72069315	.	TCACA	T	735.51	PASS	AB=0.913;AC=22;AF=0.407;AN=54;BaseQRankSum=2.717;DP=438;FS=7.792;HRun=0;HaplotypeScore=99.5519;InbreedingCoeff=0.3342;MQ=71.18;MQ0=7;MQRankSum=-0.482;QD=3.71;ReadPosRankSum=0.170;VQSLOD=1.4300;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:17:0.47:1,0,0	1/1:2,0:2:2.99:23,3,0	0/0:23,0:19:0:0,0,0	./.	0/0:24,0:24:18.01:0,18,233	1/1:8,6:14:3.01:47,3,0	0/0:17,0:18:23.80:0,24,441	0/0:8,0:8:2.97:0,3,20	0/0:16,0:17:29.68:0,30,495	0/1:14,0:15:11.92:12,0,111	0/1:17,0:16:23.54:40,0,24	0/1:9,2:11:3.27:159,0,3	1/1:5,0:4:2.99:23,3,0	0/0:9,0:10:21.26:0,21,337	0/0:14,0:15:14.79:0,15,265	0/0:21,0:20:41.33:0,41,770	0/0:24,0:25:14.51:0,15,140	0/0:17,0:16:14.71:0,15,78	0/1:15,0:15:14.84:15,0,43	0/0:14,2:17:6.20:0,6,36	0/1:18,0:17:1.76:2,0,127	1/1:6,4:11:5.89:93,6,0	1/1:11,3:14:6.21:191,6,0	1/1:25,2:27:12.89:145,13,0	1/1:11,1:13:2.24:115,2,0	0/0:21,0:19:23.36:0,23,484	0/1:9,0:15:29.37:29,0,51	0/0:3,0:3:6.02:0,6,141
chr10	72069364	.	TAC	T	1844.95	PASS	AB=0.968;AC=26;AF=0.464;AN=56;BaseQRankSum=6.254;DP=641;FS=9.264;HRun=0;HaplotypeScore=111.5820;InbreedingCoeff=0.6895;MQ=48.51;MQ0=36;MQRankSum=2.460;QD=6.52;ReadPosRankSum=1.063;VQSLOD=2.6748;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,13:19:6.02:73,6,0	1/1:2,4:6:3.92:39,4,0	0/0:59,0:8:21.53:0,22,309	0/0:53,0:11:27.05:0,27,390	0/0:23,0:23:45.15:0,45,727	0/0:21,0:20:33.10:0,33,503	0/1:19,0:18:33.45:33,0,165	0/0:21,0:21:45.15:0,45,699	0/0:12,0:12:12.18:0,12,343	1/1:9,21:29:65.76:743,66,0	1/1:10,8:16:8.79:87,9,0	1/1:7,7:13:9.92:143,10,0	1/1:3,10:12:11.50:119,12,0	0/0:16,0:16:36.07:0,36,554	0/1:16,1:15:0.61:1,0,422	0/0:27,0:27:49.41:0,49,780	1/1:12,13:25:15.05:183,15,0	0/0:24,0:22:37.19:0,37,592	0/0:23,0:20:17.57:0,18,508	0/1:16,0:16:3.62:4,0,422	0/0:35,0:32:56.94:0,57,900	1/1:6,16:22:5.91:73,6,0	1/1:11,15:26:11.90:135,12,0	1/1:12,19:29:12.04:146,12,0	1/1:10,3:13:23.73:262,24,0	0/0:27,0:26:41.28:0,41,911	0/0:16,0:16:33.07:0,33,482	0/1:12,1:12:6.60:7,0,368
chr10	72070141	.	GGACAAGT	G	4339.87	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.389;DP=652;FS=15.498;HRun=0;HaplotypeScore=153.2786;InbreedingCoeff=0.9966;MQ=80.24;MQ0=0;MQRankSum=-11.835;QD=52.93;ReadPosRankSum=1.170;VQSLOD=4.1647;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,132,5093	0/0:8,0:8:24.08:0,24,910	0/0:21,0:21:60.21:0,60,2285	0/0:17,0:17:39.18:0,39,1665	0/0:14,0:14:42.14:0,42,1638	0/0:17,0:17:42.14:0,42,1651	0/0:23,0:23:66.21:0,66,2394	0/0:31,0:31:90.31:0,90,3441	0/0:28,0:28:84.29:0,84,3402	0/0:40,0:40:99:0,120,4915	0/0:17,0:17:51.18:0,51,2006	1/1:0,14:14:36.12:955,36,0	1/1:2,18:20:48.16:1284,48,0	0/0:17,0:17:48.15:0,48,1791	0/0:31,0:31:90.31:0,90,3579	0/0:22,0:22:66.23:0,66,2657	0/0:36,0:36:99:0,108,4419	0/0:24,0:24:69.22:0,69,2695	0/0:20,0:20:60.19:0,60,2159	0/0:17,0:17:48.15:0,48,1754	0/0:49,0:49:99:0,141,5357	1/1:3,19:22:39.13:1050,39,0	1/1:0,13:13:21.07:566,21,0	1/1:2,11:13:18.06:485,18,0	0/0:13,0:13:39.13:0,39,1569	0/0:30,0:30:90.31:0,90,3653	0/0:31,0:31:90.31:0,90,3569	0/0:16,0:16:48.16:0,48,1966
chr10	72070250	.	TTCTCTC	T	273.81	PASS	AB=0.975;AC=10;AF=0.208;AN=48;BaseQRankSum=3.010;DP=506;FS=20.516;HRun=0;HaplotypeScore=110.7886;InbreedingCoeff=-0.0036;MQ=64.78;MQ0=21;MQRankSum=-1.288;QD=1.93;ReadPosRankSum=1.851;VQSLOD=0.7388;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:16:3.01:0,3,40	./.	./.	0/0:36,0:17:1.55:0,2,4	0/0:14,0:14:3.01:0,3,87	0/0:14,0:13:3.01:0,3,94	0/0:29,0:30:18.06:0,18,472	0/0:33,0:33:19.93:0,20,230	0/1:10,0:9:13.82:14,0,201	1/1:21,0:20:1.82:5,2,0	./.	0/0:14,0:14:9.03:0,9,223	0/0:10,0:10:5.98:0,6,108	0/1:15,0:15:4.25:4,0,434	0/0:15,0:15:21.06:0,21,455	1/1:9,5:14:8.48:136,8,0	0/1:23,0:21:39.97:114,0,40	0/0:25,0:23:21.07:0,21,424	0/1:13,0:13:29.84:30,0,194	0/0:18,0:18:9.03:0,9,241	0/0:19,1:18:2.05:0,2,307	0/0:11,0:10:3.01:0,3,75	0/0:20,0:21:6.02:0,6,146	0/0:22,0:21:12.02:0,12,269	./.	0/1:20,0:20:18.90:19,0,102	0/1:23,1:23:75.40:75,0,486	0/0:16,0:14:3.48:0,3,43
chr10	72070282	.	CTCTCTCTCTCTCTCT	C	500.15	PASS	AB=0.960;AC=6;AF=0.111;AN=54;BaseQRankSum=4.927;DP=504;FS=9.334;HRun=0;HaplotypeScore=150.8802;InbreedingCoeff=0.1865;MQ=36.05;MQ0=95;MQRankSum=-2.714;QD=5.88;ReadPosRankSum=-4.516;VQSLOD=-0.1992;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:17:33.22:33,0,140	./.	0/0:8,0:2:6.02:0,6,162	0/0:16,0:1:3.01:0,3,99	0/0:18,0:15:14.88:0,15,506	0/0:17,0:13:14.52:0,15,381	0/0:23,0:19:25.36:0,25,1389	0/0:29,0:26:70.75:0,71,2349	0/0:11,0:10:12.93:0,13,703	1/1:7,11:15:11.35:237,11,0	0/0:9,0:7:0.47:0,0,1	0/0:14,0:13:14.56:0,15,855	0/1:9,0:9:21.06:21,0,313	0/0:20,0:15:27.86:0,28,1468	0/0:16,0:15:30.94:0,31,1712	0/0:14,0:14:17.37:0,17,657	0/1:21,0:15:99:313,0,153	0/0:27,0:21:42.54:0,43,1914	0/0:18,0:14:35.95:0,36,964	0/0:20,0:18:15.43:0,15,778	0/0:37,0:24:26.50:0,26,1443	0/0:14,0:11:3.29:0,3,163	0/0:25,0:24:26.33:0,26,1014	0/0:19,0:13:10.37:0,10,776	0/1:6,0:3:19.84:20,0,74	0/0:26,0:24:69.08:0,69,2023	0/0:21,0:17:37.84:0,38,1892	0/0:17,0:10:18.06:0,18,406
chr10	72070304	.	CGTGTGTGTGTGTGT	C	787.84	PASS	AB=0.963;AC=20;AF=0.556;AN=36;BaseQRankSum=0.578;DP=463;FS=19.590;HRun=0;HaplotypeScore=113.8783;InbreedingCoeff=0.2719;MQ=30.26;MQ0=107;MQRankSum=-1.555;QD=3.79;ReadPosRankSum=1.466;VQSLOD=0.9756;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:21:0:0,0,0	./.	./.	./.	0/0:15,1:13:2.85:0,3,89	1/1:13,2:11:9.03:322,9,0	./.	./.	./.	./.	./.	0/0:9,0:8:0.46:0,0,1	0/0:7,0:7:2.88:0,3,15	0/0:21,0:16:0.46:0,0,2	1/1:10,0:8:3.01:68,3,0	./.	./.	0/0:25,0:19:0:0,0,1	1/1:19,1:16:2.98:116,3,0	1/1:18,0:16:0.47:1,0,0	0/0:51,0:36:0.05:0,0,1	1/1:11,0:9:0.06:0,0,0	1/1:17,0:15:0.80:1,1,0	1/1:17,0:8:0.94:1,1,0	0/0:7,0:5:3.01:0,3,46	0/1:23,2:23:99:158,0,124	1/1:21,4:20:2.11:115,2,0	1/1:14,0:10:3.01:98,3,0
chr10	72071692	.	T	TGATA	3116.03	PASS	AB=0.800;AC=19;AF=0.380;AN=50;BaseQRankSum=1.942;DP=737;FS=1.072;HRun=0;HaplotypeScore=156.2465;InbreedingCoeff=0.7212;MQ=54.79;MQ0=4;MQRankSum=-4.285;QD=11.09;ReadPosRankSum=-4.277;VQSLOD=1.9169;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:8.22:0,8,188	0/0:11,0:11:18.06:0,18,278	./.	./.	0/0:31,0:31:36.12:0,36,552	1/1:11,0:28:8.86:88,9,0	1/1:14,0:18:3:29,3,0	1/1:47,0:44:44.84:454,45,0	0/0:23,0:23:33.11:0,33,495	0/0:36,0:33:51.17:0,51,780	0/0:30,0:30:36.12:0,36,552	0/0:24,0:24:2.61:0,3,18	./.	0/0:31,0:31:63.20:0,63,948	0/0:32,0:32:54.17:0,54,805	0/0:18,0:18:24.08:0,24,365	0/0:27,0:28:54.09:0,54,867	0/0:8,0:15:8.14:0,8,82	1/1:16,0:23:18.05:272,18,0	0/1:27,8:36:71.53:324,0,72	1/1:11,16:29:30.10:703,30,0	0/0:35,0:35:0:0,0,0	0/0:23,0:23:2.67:0,3,27	1/1:23,0:22:0.12:38,0,0	0/0:34,0:34:66.22:0,66,992	1/1:18,0:32:53.75:533,54,0	1/1:15,18:33:30.10:703,30,0	1/1:4,0:8:12.02:154,12,0
chr10	72071730	.	ATAGATAGG	A	443.42	PASS	AB=0.750;AC=8;AF=0.148;AN=54;BaseQRankSum=3.825;DP=758;FS=0.000;HRun=0;HaplotypeScore=217.1896;InbreedingCoeff=0.6850;MQ=58.38;MQ0=8;MQRankSum=-0.312;QD=3.38;ReadPosRankSum=-1.838;VQSLOD=2.2360;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:64.75:65,0,79	0/0:10,0:10:30.07:0,30,938	0/0:19,0:16:35.12:0,35,330	0/0:19,0:7:16.62:0,17,118	0/0:33,0:33:95.03:0,95,2248	0/0:28,0:28:41.18:0,41,515	0/0:19,0:17:17.88:0,18,323	0/0:62,0:58:99:0,171,2497	0/0:24,0:24:71.23:0,71,1916	0/0:35,0:34:99:0,99,2738	0/0:22,0:22:66.15:0,66,1896	1/1:0,20:20:2.71:88,3,0	./.	0/0:29,0:29:87.23:0,87,2859	0/0:31,0:31:93.22:0,93,2769	0/0:16,0:16:48.10:0,48,1297	0/0:33,0:33:84.40:0,84,2863	0/0:17,0:17:30.83:0,31,412	0/0:27,0:23:62.76:0,63,902	0/0:32,0:32:80.77:0,81,1316	0/0:24,0:24:45.85:0,46,1316	0/1:0,33:33:0.01:2,0,0	1/1:0,32:32:5.67:109,6,0	1/1:17,3:19:11.45:306,11,0	0/0:33,0:33:99:0,99,3238	0/0:41,0:41:99:0,120,1873	0/0:34,0:34:75.06:0,75,1804	0/0:22,0:22:49.16:0,49,709
chr10	72071734	.	ATAGG	A	1168.82	PASS	AB=1.000;AC=10;AF=0.185;AN=54;BaseQRankSum=5.946;DP=754;FS=0.570;HRun=0;HaplotypeScore=167.6872;InbreedingCoeff=0.7536;MQ=59.11;MQ0=5;MQRankSum=0.941;QD=7.90;ReadPosRankSum=-0.127;VQSLOD=2.7688;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,11:26:57.08:871,57,0	0/0:10,0:10:30.07:0,30,627	0/0:21,0:18:41.10:0,41,377	0/0:21,0:9:19.19:0,19,137	0/0:33,0:33:95.03:0,95,1616	0/0:25,0:25:37.24:0,37,375	0/0:19,0:17:17.84:0,18,225	0/0:60,1:58:99:0,171,1893	0/0:25,0:25:74.21:0,74,1311	0/0:39,0:38:99:0,111,2025	0/0:23,0:23:66.14:0,66,1320	1/1:20,0:20:3.01:42,3,0	./.	0/0:29,0:29:87.21:0,87,1984	0/0:31,0:31:93.21:0,93,1890	0/0:17,0:17:51.10:0,51,936	0/0:33,0:33:76.53:0,77,1948	0/1:16,0:16:34.52:35,0,145	0/0:23,0:21:24.53:0,25,569	0/0:26,0:26:68.51:0,69,839	0/0:25,0:25:48.83:0,49,851	0/1:33,0:33:0.32:1,0,0	1/1:32,0:32:5.97:63,6,0	1/1:21,0:20:32.44:307,32,0	0/0:32,0:32:96.22:0,96,2135	0/0:40,0:40:99:0,117,1253	0/0:34,0:34:75.03:0,75,1195	0/0:22,0:22:56.99:0,57,526
chr10	72071735	.	TAGG	T	98.18	PASS	AB=0.980;AC=9;AF=0.161;AN=56;BaseQRankSum=6.105;DP=755;FS=1.987;HRun=0;HaplotypeScore=160.3064;InbreedingCoeff=0.4098;MQ=59.84;MQ0=4;MQRankSum=-0.357;QD=0.68;ReadPosRankSum=0.491;VQSLOD=2.9574;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:72.40:147,0,72	0/0:10,0:10:30.10:0,30,704	0/0:23,0:20:57.10:0,57,1058	0/0:21,0:9:20.93:0,21,282	0/0:33,0:33:96.33:0,96,2179	0/0:24,0:24:30.89:0,31,635	0/0:17,1:16:27.02:0,27,503	0/0:60,1:58:99:0,172,3408	0/0:25,0:25:75.23:0,75,1664	0/0:38,0:38:99:0,111,2542	0/0:23,0:23:69.23:0,69,1555	1/1:20,0:20:2.58:20,3,0	0/1:17,0:17:0.15:0,0,0	0/0:29,0:29:87.28:0,87,2017	0/0:30,0:30:90.31:0,90,2077	0/0:17,0:17:51.18:0,51,1179	0/0:34,1:35:75.40:0,75,2196	0/1:15,1:16:22.31:22,0,429	0/0:23,0:21:42.63:0,43,1060	0/0:27,0:27:71.57:0,72,1363	0/0:24,1:25:50.45:0,50,1005	1/1:33,0:33:0.30:2,0,0	1/1:32,0:32:2.08:20,2,0	0/0:22,0:21:0.45:0,0,201	0/0:32,0:32:96.33:0,96,2257	0/0:40,0:40:99:0,115,2318	0/0:33,0:33:72.16:0,72,1477	0/0:21,1:22:8.66:0,9,1177
chr10	72071736	.	AGG	A	147.16	PASS	AB=0.979;AC=12;AF=0.214;AN=56;BaseQRankSum=7.640;DP=758;FS=3.255;HRun=3;HaplotypeScore=149.1669;InbreedingCoeff=0.2378;MQ=59.89;MQ0=4;MQRankSum=-2.959;QD=0.58;ReadPosRankSum=-1.563;VQSLOD=-0.5116;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:98.15:109,0,98	0/0:10,0:10:30.10:0,30,579	0/0:23,0:21:47.40:0,47,980	0/0:20,0:9:20.75:0,21,251	0/0:33,0:33:96:0,96,1830	0/1:22,0:22:61.28:61,0,532	0/1:16,2:16:2.83:3,0,410	0/0:60,0:58:99:0,139,2390	0/0:25,0:25:75.23:0,75,1404	0/0:39,0:39:99:0,111,2133	0/0:23,0:23:66.20:0,66,1221	1/1:20,0:20:2.88:15,3,0	0/1:17,0:17:0:0,0,0	0/0:29,0:29:87.28:0,87,1622	0/0:30,0:30:87.28:0,87,1642	0/0:18,0:18:54.19:0,54,1035	0/0:36,1:37:99:0,104,1865	0/0:16,0:17:21.66:0,22,465	0/1:23,0:21:3.87:4,0,794	0/0:27,0:27:34.49:0,34,1070	0/0:25,0:25:51.16:0,51,747	0/1:33,0:33:0.30:1,0,0	1/1:32,0:32:5.85:37,6,0	0/0:22,0:21:9.30:0,9,218	0/0:33,0:33:99:0,99,1857	0/1:41,1:42:18.99:19,0,1798	0/0:30,0:30:70.70:0,71,1125	0/1:21,1:22:30.10:30,0,1022
chr10	72071859	.	GAGATAGAT	G	1514.37	PASS	AB=0.944;AC=5;AF=0.104;AN=48;BaseQRankSum=6.184;DP=677;FS=0.752;HRun=0;HaplotypeScore=161.6341;InbreedingCoeff=0.5663;MQ=56.01;MQ0=10;MQRankSum=-3.006;QD=17.82;ReadPosRankSum=0.545;VQSLOD=2.7865;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:11.90:0,12,133	./.	./.	0/0:17,0:9:2.84:0,3,14	0/0:35,0:35:54.15:0,54,1602	0/0:17,0:17:27.09:0,27,994	0/0:12,0:11:12.04:0,12,321	0/0:54,0:48:71.67:0,72,1619	0/0:20,0:20:39.13:0,39,1396	1/1:10,26:35:72.21:1509,72,0	./.	0/0:15,0:17:15.04:0,15,199	0/0:4,0:26:12.01:0,12,144	0/0:7,1:26:38.95:0,39,320	0/0:30,0:30:63.20:0,63,2260	0/0:27,0:27:45.15:0,45,1514	1/1:13,2:15:3.01:55,3,0	0/0:22,0:22:46.70:0,47,1453	0/0:23,0:18:27.09:0,27,1007	0/0:31,0:31:39.13:0,39,1391	0/0:21,0:21:48.16:0,48,1888	0/0:24,0:26:20.96:0,21,276	0/0:11,0:15:9.03:0,9,134	0/0:16,0:17:9.01:0,9,147	./.	0/1:32,2:34:64.92:65,0,2367	0/0:37,0:36:87.30:0,87,3049	0/0:20,0:20:32.46:0,32,1129
chr10	72071893	.	GAT	G	290.49	PASS	AB=0.913;AC=11;AF=0.204;AN=54;BaseQRankSum=10.256;DP=668;FS=6.474;HRun=0;HaplotypeScore=93.3539;InbreedingCoeff=-0.0684;MQ=50.87;MQ0=14;MQRankSum=-1.487;QD=1.33;ReadPosRankSum=1.361;VQSLOD=0.5189;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,2:14:43.21:61,0,43	0/0:9,0:9:15.05:0,15,227	./.	0/0:15,0:4:8.70:0,9,99	0/0:37,0:37:78.25:0,78,1294	0/0:16,0:16:39.10:0,39,612	0/1:17,0:16:0.36:0,0,461	0/0:46,0:39:99:0,105,1637	0/0:26,0:26:72.23:0,72,1163	0/1:39,0:38:3.25:3,0,661	0/0:22,0:22:15.05:0,15,228	0/1:11,5:16:71.32:71,0,153	1/1:24,0:24:2.92:34,3,0	0/1:21,0:21:4.55:5,0,74	0/0:29,0:29:84.27:0,84,1421	0/0:26,0:26:72.23:0,72,1187	0/1:15,1:16:25.90:26,0,239	0/1:26,3:29:93.74:94,0,968	0/0:19,0:12:36.11:0,36,604	0/0:30,0:30:66.22:0,66,1105	0/0:23,0:23:69.24:0,69,1199	0/1:19,5:22:70.80:71,0,176	0/0:24,0:22:9.03:0,9,154	0/1:15,1:14:46.12:58,0,46	0/0:19,0:19:6.01:0,6,69	0/0:44,0:43:99:0,105,1748	0/0:38,0:37:99:0,105,1784	0/0:17,0:17:36.12:0,36,636
chr10	72071895	.	T	TAG	358.27	PASS	AB=0.938;AC=8;AF=0.148;AN=54;BaseQRankSum=5.684;DP=671;FS=3.477;HRun=0;HaplotypeScore=95.2449;InbreedingCoeff=0.0046;MQ=50.72;MQ0=12;MQRankSum=-2.128;QD=2.65;ReadPosRankSum=-2.664;VQSLOD=1.7250;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,6:14:17.70:160,0,18	0/0:9,0:9:15.05:0,15,227	./.	0/0:19,0:4:9.02:0,9,115	0/0:36,0:36:78.25:0,78,1165	0/0:16,0:16:39.10:0,39,548	0/0:17,0:17:1.09:0,1,465	0/0:51,0:44:99:0,108,1572	0/0:25,0:25:72.23:0,72,1073	0/0:41,0:40:61.62:0,62,1073	0/0:26,0:26:18.05:0,18,253	0/1:15,0:15:66.30:66,0,116	1/1:21,0:21:3.41:19,3,0	0/0:22,0:22:45.01:0,45,432	0/0:30,0:30:87.26:0,87,1281	0/0:24,0:24:72.23:0,72,1077	0/1:15,0:15:26.08:26,0,249	0/1:27,1:29:94.32:94,0,855	0/0:17,0:12:36.11:0,36,531	0/0:31,0:31:66.02:0,66,1005	0/0:24,0:24:69.23:0,69,1054	0/1:23,0:21:84.16:88,0,84	0/0:21,0:20:8.94:0,9,108	0/1:15,0:14:34.20:34,0,37	0/0:19,0:20:6.48:0,6,69	0/0:41,0:40:99:0,108,1600	0/0:37,0:36:99:0,105,1556	0/0:18,0:18:35.78:0,36,530
chr10	72071905	.	TGATAG	T	50.17	PASS	AB=0.844;AC=5;AF=0.093;AN=54;BaseQRankSum=4.506;DP=635;FS=3.054;HRun=0;HaplotypeScore=118.7004;InbreedingCoeff=0.1282;MQ=50.23;MQ0=17;MQRankSum=-0.983;QD=0.87;ReadPosRankSum=-1.904;VQSLOD=2.2680;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:16:46.55:47,0,91	0/0:9,0:9:14.90:0,15,499	./.	0/0:19,0:4:7.84:0,8,180	0/0:34,0:34:72.23:0,72,2103	0/0:16,0:16:36.11:0,36,1030	0/0:12,0:13:35.92:0,36,1139	0/0:40,0:34:99:0,102,2964	0/0:25,0:25:72.25:0,72,2236	0/0:40,0:39:99:0,117,3235	0/0:24,0:24:27.09:0,27,896	0/1:7,3:12:26.91:27,0,372	1/1:15,0:15:0.18:49,0,0	0/0:22,0:22:57.20:0,57,1760	0/0:29,0:29:87.28:0,87,2705	0/0:26,0:26:78.27:0,78,2415	0/0:14,0:14:23.53:0,24,754	0/0:28,0:29:77.33:0,77,2092	0/0:17,0:11:33.11:0,33,995	0/0:33,0:33:78.23:0,78,2338	0/0:24,0:24:72.25:0,72,2258	0/0:15,3:17:12.04:0,12,388	0/0:20,0:19:9.03:0,9,300	0/1:10,1:11:35.93:36,0,94	0/0:19,0:19:12.04:0,12,393	0/0:38,0:37:69.50:0,70,3257	0/0:36,0:35:99:0,105,3291	0/0:17,0:17:33.11:0,33,928
chr10	72071931	.	T	TG	351.87	PASS	AB=0.830;AC=7;AF=0.125;AN=56;BaseQRankSum=4.823;DP=668;FS=2.521;HRun=0;HaplotypeScore=80.6368;InbreedingCoeff=0.0782;MQ=53.53;MQ0=17;MQRankSum=2.058;QD=4.04;ReadPosRankSum=-4.512;VQSLOD=2.2780;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:9,3:12:37.76:41,0,38	0/0:12,0:12:23.92:0,24,336	0/0:13,1:2:6.02:0,6,84	0/0:21,0:7:11.97:0,12,144	0/0:31,0:31:69.23:0,69,965	0/0:18,0:18:36.12:0,36,503	0/0:13,0:13:36.10:0,36,485	0/0:52,0:47:99:0,136,1840	0/0:27,0:27:72.22:0,72,987	0/0:40,0:40:99:0,120,1661	0/0:26,0:26:51.17:0,51,713	0/1:11,2:13:99:100,0,147	1/1:7,1:8:3.01:48,3,0	0/0:21,0:21:57.18:0,57,781	0/0:32,0:32:93.29:0,93,1283	0/0:34,0:34:99:0,102,1426	0/0:21,0:21:35.89:0,36,485	0/0:27,0:27:75.04:0,75,1009	0/0:16,0:13:39.12:0,39,529	0/0:32,0:32:87.29:0,87,1217	0/0:23,0:23:66.22:0,66,923	0/1:15,4:16:99:168,0,144	0/1:18,4:20:80.39:80,0,111	0/1:9,3:8:35.94:42,0,36	0/0:24,0:24:23.66:0,24,335	0/0:36,0:35:99:0,102,1426	0/0:43,0:43:99:0,120,1643	0/0:18,0:18:45.14:0,45,629
chr10	72072168	.	A	ATAGT	4716.78	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-0.843;DP=524;FS=4.971;HRun=0;HaplotypeScore=130.0935;InbreedingCoeff=0.8411;MQ=45.54;MQ0=4;MQRankSum=-3.703;QD=24.31;ReadPosRankSum=-2.965;VQSLOD=4.0807;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,16:22:10.94:262,11,0	1/1:0,6:6:6.92:102,7,0	0/0:18,0:3:7.58:0,8,117	0/1:10,0:4:10.59:11,0,147	0/0:27,0:27:39.12:0,39,698	0/0:16,0:16:21.01:0,21,334	0/0:16,0:15:11.27:0,11,189	0/0:43,0:39:99:0,114,1972	0/0:12,0:12:14.99:0,15,243	1/1:4,26:28:27.16:1648,27,0	1/1:3,17:19:21.41:385,21,0	1/1:0,17:17:31.70:501,32,0	1/1:3,15:18:30.40:310,30,0	0/0:20,0:20:11.99:0,12,164	0/0:20,0:20:36.08:0,36,588	0/0:22,0:22:21.48:0,21,504	1/1:11,4:15:23.89:273,24,0	0/0:10,0:10:18:0,18,345	0/0:10,0:9:24.08:0,24,455	0/0:26,0:26:44.87:0,45,757	0/0:11,0:11:5.94:0,6,114	1/1:1,18:18:42.16:638,42,0	1/1:3,11:13:10.36:123,10,0	1/1:4,3:7:3.01:81,3,0	1/1:1,15:14:22.36:385,22,0	0/0:29,0:29:81.24:0,81,1402	0/0:31,0:31:59.21:0,59,1134	0/0:19,0:17:42.06:0,42,726
chr10	72072268	.	GAT	G	138.37	PASS	AB=1.000;AC=23;AF=0.575;AN=40;BaseQRankSum=3.744;DP=53;FS=0.000;HRun=0;HaplotypeScore=61.6970;InbreedingCoeff=0.2404;MQ=75.07;MQ0=0;MQRankSum=-0.982;QD=4.61;ReadPosRankSum=1.195;VQSLOD=1.7405;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:2,0:2:0.03:0,0,0	1/1:0,1:1:2.22:7,2,0	0/1:2,0:1:6.81:7,0,41	0/0:2,0:2:3.01:0,3,41	0/0:1,0:1:0:0,0,0	0/0:3,0:3:3.37:0,3,17	./.	./.	./.	./.	0/0:1,0:1:0:0,0,0	1/1:6,1:7:13:70,13,0	1/1:0,1:1:2.04:6,2,0	1/1:3,0:3:2.22:7,2,0	0/0:6,0:6:1.82:0,2,23	0/1:4,0:4:8.10:27,0,8	1/1:4,1:5:1.72:5,2,0	1/1:1,0:1:2.50:9,2,0	1/1:1,0:1:3.01:42,3,0	./.	./.	1/1:1,0:1:0.89:2,1,0	./.	0/0:1,0:1:0:0,0,0	./.	1/1:1,0:1:3.01:36,3,0	0/0:3,0:3:3.13:0,3,17	1/1:1,0:1:3:25,3,0
chr10	72072270	.	T	TAG	221.14	PASS	AB=0.833;AC=22;AF=0.550;AN=40;BaseQRankSum=3.028;DP=59;FS=8.852;HRun=0;HaplotypeScore=67.4451;InbreedingCoeff=0.2606;MQ=71.75;MQ0=0;MQRankSum=-1.535;QD=7.90;ReadPosRankSum=2.862;VQSLOD=2.1446;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:3,1:4:1.96:0,2,7	1/1:1,0:1:1.25:3,1,0	0/1:1,0:1:3.26:3,0,20	0/0:2,0:2:2.90:0,3,16	0/0:0,1:1:0:0,0,0	0/0:0,3:3:2.50:0,2,6	./.	./.	./.	1/1:1,0:1:0.89:2,1,0	0/0:1,1:2:2.04:0,2,7	1/1:2,6:8:3.08:72,3,0	0/1:2,0:2:0.79:24,0,1	0/0:1,0:3:0:0,0,0	0/0:2,3:6:4.05:0,4,9	1/1:3,1:4:0.68:49,1,0	1/1:2,3:5:2.98:23,3,0	1/1:1,0:1:3:26,3,0	1/1:0,0:1:3.01:42,3,0	./.	./.	1/1:0,1:1:1.82:5,2,0	./.	./.	./.	1/1:0,1:1:3.01:41,3,0	0/0:2,1:3:2.27:0,2,6	1/1:1,0:1:3.01:33,3,0
chr10	72072277	.	G	GA	351.73	PASS	AB=1.000;AC=34;AF=0.810;AN=42;BaseQRankSum=2.386;DP=61;FS=0.000;HRun=1;HaplotypeScore=68.5327;InbreedingCoeff=0.2495;MQ=70.73;MQ0=0;MQRankSum=-1.252;QD=7.48;ReadPosRankSum=-1.110;VQSLOD=0.2116;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:2.71:21,3,0	1/1:1,0:1:2.96:19,3,0	0/0:2,0:1:5.98:0,6,49	0/0:3,0:3:2.95:0,3,19	1/1:0,1:1:0.47:1,0,0	1/1:0,3:3:2.60:10,3,0	./.	./.	./.	0/1:2,0:2:3.70:4,0,4	1/1:2,0:2:2.84:21,3,0	1/1:8,0:8:14.13:95,14,0	1/1:2,0:2:2.84:9,3,0	0/0:2,1:3:0.47:0,0,1	1/1:1,5:6:5.22:19,5,0	1/1:0,4:4:5.11:46,5,0	1/1:5,0:5:2.99:24,3,0	1/1:0,1:1:3.01:47,3,0	1/1:1,0:1:3.01:39,3,0	./.	./.	1/1:1,0:1:2.50:9,2,0	./.	0/1:1,0:1:0:0,0,0	./.	1/1:0,1:1:3.01:33,3,0	1/1:0,3:3:0.66:7,1,0	1/1:0,1:1:3.01:47,3,0
chr10	72072278	.	T	TTA	757.31	PASS	AC=26;AF=0.650;AN=40;BaseQRankSum=4.563;DP=61;FS=6.237;HRun=0;HaplotypeScore=66.9289;InbreedingCoeff=0.3377;MQ=70.73;MQ0=0;MQRankSum=-0.674;QD=22.95;ReadPosRankSum=2.222;VQSLOD=3.8099;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:4:3.01:39,3,0	1/1:0,1:1:3.01:35,3,0	0/0:2,0:1:5.93:0,6,51	0/0:3,0:3:2.92:0,3,18	0/0:0,0:1:0:0,0,0	0/0:0,0:3:2.50:0,2,6	./.	./.	./.	1/1:1,1:2:6.02:92,6,0	1/1:0,2:2:3.01:39,3,0	1/1:1,7:8:21.06:285,21,0	1/1:0,2:2:6.01:85,6,0	0/0:3,0:3:0:0,0,0	0/0:3,0:6:4.05:0,4,9	1/1:3,0:4:0.68:42,1,0	1/1:0,4:5:3.01:54,3,0	1/1:1,0:1:2.99:23,3,0	1/1:1,0:1:3.01:54,3,0	./.	./.	1/1:0,1:1:3.01:45,3,0	./.	./.	./.	1/1:0,0:1:3.01:51,3,0	0/0:2,0:3:2.27:0,2,6	1/1:1,0:1:2.99:24,3,0
chr10	72072281	.	T	TA	587.73	PASS	AB=1.000;AC=35;AF=0.833;AN=42;BaseQRankSum=2.766;DP=61;FS=0.000;HRun=1;HaplotypeScore=67.6007;InbreedingCoeff=0.2488;MQ=70.73;MQ0=0;MQRankSum=-1.262;QD=12.50;ReadPosRankSum=-0.564;VQSLOD=1.7872;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:4:2.70:33,3,0	1/1:0,1:1:2.98:22,3,0	0/0:2,0:1:5.96:0,6,47	0/0:3,0:3:2.04:0,2,6	1/1:1,0:1:0.47:1,0,0	1/1:3,0:3:2.60:10,3,0	./.	./.	./.	1/1:1,1:2:6.02:81,6,0	1/1:0,2:2:2.82:32,3,0	1/1:1,7:8:20.62:178,21,0	1/1:0,2:2:5.99:66,6,0	0/0:2,1:3:0.47:0,0,1	1/1:4,2:6:5.22:19,5,0	1/1:1,3:4:5.10:35,5,0	1/1:0,5:5:3.01:39,3,0	1/1:0,1:1:3.01:39,3,0	1/1:1,0:1:3.01:35,3,0	./.	./.	1/1:0,1:1:2.98:21,3,0	./.	0/1:1,0:1:0:0,0,0	./.	1/1:1,0:1:3.01:31,3,0	1/1:1,2:3:0.66:7,1,0	1/1:0,1:1:3.01:34,3,0
chr10	72072284	.	TGTG	T	634.49	PASS	AB=0.650;AC=28;AF=0.667;AN=42;BaseQRankSum=4.345;DP=61;FS=7.186;HRun=0;HaplotypeScore=67.6332;InbreedingCoeff=0.2741;MQ=70.73;MQ0=0;MQRankSum=-1.071;QD=17.15;ReadPosRankSum=1.920;VQSLOD=2.2110;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:4:2.73:42,3,0	1/1:1,0:1:3.01:44,3,0	0/0:1,0:2:0.02:0,0,0	0/0:3,0:3:6.01:0,6,60	0/0:0,1:1:0:0,0,0	0/0:0,3:3:2.33:0,2,12	./.	./.	./.	1/1:1,0:2:6:66,6,0	1/1:2,0:2:3.01:43,3,0	1/1:7,0:8:20.27:249,20,0	1/1:2,0:2:6.02:74,6,0	1/1:0,2:3:2.37:8,2,0	0/0:0,4:6:0.76:0,1,15	0/1:0,1:4:4.37:28,0,4	1/1:4,0:5:2.56:32,3,0	1/1:0,0:1:2.92:17,3,0	1/1:0,1:1:3.01:40,3,0	./.	./.	1/1:1,0:1:3.01:45,3,0	./.	0/1:0,1:1:0:0,0,0	./.	1/1:0,1:1:3.01:41,3,0	0/0:0,1:3:3.08:0,3,13	1/1:0,0:1:2.74:12,3,0
chr10	72072285	.	G	GA	387.77	PASS	AB=1.000;AC=45;AF=0.865;AN=52;BaseQRankSum=-0.641;DP=125;FS=8.963;HRun=0;HaplotypeScore=125.1889;InbreedingCoeff=0.2984;MQ=53.50;MQ0=0;MQRankSum=0.710;QD=3.34;ReadPosRankSum=-2.033;VQSLOD=2.5216;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:0.52:2,1,0	1/1:4,0:4:0.25:7,0,0	0/1:2,0:1:0.24:0,0,6	0/0:3,0:3:1.05:0,1,25	1/1:4,0:4:2.33:6,2,0	1/1:8,0:8:12.78:40,13,0	0/0:1,0:1:0:0,0,0	./.	1/1:2,0:2:2.04:6,2,0	1/1:5,1:6:13.19:51,13,0	1/1:6,0:5:1.06:5,1,0	1/1:10,0:10:3.76:35,4,0	1/1:3,0:3:4.88:20,5,0	1/1:3,1:4:1.35:5,1,0	1/1:9,2:11:15.41:49,15,0	1/1:6,3:9:11.32:37,11,0	1/1:5,0:5:2.99:23,3,0	1/1:1,1:2:4.05:13,4,0	1/1:2,0:2:5.40:25,5,0	1/1:4,0:4:6.11:18,6,0	./.	0/1:2,0:2:0.89:1,0,1	1/1:3,0:3:4.55:13,5,0	0/1:1,0:1:0:0,0,0	1/1:5,0:5:6.08:20,6,0	1/1:6,0:6:13.26:42,13,0	1/1:8,2:10:12.23:50,12,0	1/1:1,1:2:2.43:12,2,0
chr10	72072288	.	AT	A	219.04	PASS	AB=0.854;AC=25;AF=0.500;AN=50;BaseQRankSum=5.887;DP=125;FS=0.000;HRun=1;HaplotypeScore=113.7725;InbreedingCoeff=0.3215;MQ=53.50;MQ0=0;MQRankSum=0.977;QD=2.84;ReadPosRankSum=5.814;VQSLOD=-0.4383;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:2.69:20,3,0	0/1:4,0:4:2.41:14,0,2	0/0:2,0:1:5.95:0,6,42	0/0:3,0:3:6.02:0,6,84	0/0:3,1:4:1.71:0,2,6	0/0:5,3:8:12.69:0,13,37	./.	./.	0/0:1,1:2:2.04:0,2,6	1/1:6,0:6:13.01:54,13,0	0/1:6,0:5:5.04:11,0,5	1/1:10,0:10:3.78:73,4,0	1/1:3,0:3:1.41:23,1,0	0/1:2,2:4:1.88:2,0,2	0/0:7,4:11:10.06:0,10,34	0/1:8,1:9:5.02:5,0,19	1/1:5,0:5:2.49:21,2,0	1/1:2,0:2:5.34:21,5,0	1/1:1,1:2:5.04:33,5,0	0/0:3,1:4:6.11:0,6,18	./.	0/1:2,0:2:1.10:8,0,1	0/0:3,0:3:6.11:0,6,18	0/1:0,1:1:0:0,0,0	0/0:5,0:5:0.67:0,1,14	1/1:5,1:6:8.82:52,9,0	0/1:9,1:10:6.01:6,0,10	1/1:2,0:2:4.82:17,5,0
chr10	72072289	.	T	TA	1306.61	PASS	AB=1.000;AC=45;AF=0.900;AN=50;BaseQRankSum=1.961;DP=125;FS=0.000;HRun=1;HaplotypeScore=110.2262;InbreedingCoeff=0.3635;MQ=53.50;MQ0=0;MQRankSum=-2.460;QD=11.46;ReadPosRankSum=-0.992;VQSLOD=1.3088;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,4:5:2.69:30,3,0	1/1:0,4:4:2.79:39,3,0	0/0:2,0:1:3.85:0,4,12	0/0:3,0:3:6.02:0,6,77	1/1:1,3:4:2.51:7,3,0	1/1:3,5:8:12.78:40,13,0	./.	./.	1/1:1,1:2:2.04:6,2,0	1/1:0,6:6:17.79:233,18,0	1/1:0,6:5:6.87:38,7,0	1/1:1,9:10:24.27:192,24,0	1/1:0,3:3:8:50,8,0	1/1:2,2:4:1.35:5,1,0	1/1:4,7:11:15.41:49,15,0	1/1:1,8:9:15.29:63,15,0	1/1:1,4:5:3.01:32,3,0	1/1:0,2:2:4.56:32,5,0	1/1:1,1:2:6.02:76,6,0	1/1:1,3:4:6.11:18,6,0	./.	1/1:0,2:2:5.04:34,5,0	1/1:0,3:3:6.11:18,6,0	0/1:1,0:1:0:0,0,0	1/1:0,5:5:6.08:20,6,0	1/1:1,5:6:18.05:244,18,0	1/1:1,9:10:12.71:117,13,0	1/1:0,2:2:5.98:66,6,0
chr10	72072292	.	T	TA	1984.10	PASS	AB=0.607;AC=42;AF=0.808;AN=52;BaseQRankSum=2.702;DP=170;FS=5.370;HRun=1;HaplotypeScore=147.0744;InbreedingCoeff=0.3350;MQ=51.98;MQ0=0;MQRankSum=-1.660;QD=13.05;ReadPosRankSum=3.047;VQSLOD=3.0005;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,5:6:6.13:58,6,0	0/1:2,4:6:1.88:38,0,2	0/0:2,0:1:4.72:0,5,16	0/0:4,0:4:5.43:0,5,75	0/0:3,4:7:0.60:0,1,5	1/1:4,8:12:11.13:79,11,0	1/1:2,1:3:6.02:85,6,0	./.	1/1:1,2:3:5.05:53,5,0	1/1:4,6:10:26.27:345,26,0	1/1:0,6:5:6.88:46,7,0	1/1:2,10:12:20.27:279,20,0	1/1:2,3:5:14:127,14,0	0/1:2,4:6:0.36:0,0,3	1/1:0,11:11:15.41:49,15,0	1/1:1,9:10:12.97:73,13,0	1/1:1,5:6:0.68:34,1,0	1/1:3,2:5:4.40:81,4,0	1/1:0,2:2:6.02:88,6,0	1/1:2,4:6:1.44:10,1,0	./.	1/1:1,2:3:2.71:39,3,0	0/1:5,3:8:0.89:7,0,1	0/1:0,1:1:0:0,0,0	1/1:2,5:7:1.41:13,1,0	1/1:3,6:9:23.91:351,24,0	1/1:3,10:13:13.38:160,13,0	1/1:0,2:2:6.02:78,6,0
chr10	72072297	.	T	TA	2451.01	PASS	AB=0.615;AC=42;AF=0.808;AN=52;BaseQRankSum=3.184;DP=210;FS=5.021;HRun=1;HaplotypeScore=156.0453;InbreedingCoeff=0.2552;MQ=48.30;MQ0=0;MQRankSum=0.807;QD=12.90;ReadPosRankSum=4.832;VQSLOD=2.9295;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:6:4.60:92,5,0	0/1:1,6:7:1.88:45,0,2	0/0:3,0:1:5.79:0,6,37	0/1:4,0:4:14.47:14,0,36	0/0:1,7:8:0.60:0,1,5	1/1:0,12:12:14.09:100,14,0	1/1:1,4:5:6.70:139,7,0	./.	0/1:0,3:3:0.30:2,0,0	1/1:0,10:10:30.06:440,30,0	1/1:1,6:6:6.88:58,7,0	1/1:0,12:12:20.27:326,20,0	1/1:3,5:8:6.61:99,7,0	0/1:2,6:8:0.36:0,0,3	1/1:1,11:12:15.41:49,15,0	1/1:3,10:13:12.97:81,13,0	1/1:0,6:6:3.01:47,3,0	1/1:1,5:6:13.56:163,14,0	1/1:0,4:4:12.04:191,12,0	1/1:3,6:9:1.44:10,1,0	./.	1/1:4,4:7:0.38:43,0,0	0/1:3,8:11:3.41:6,0,3	0/1:0,1:1:0:0,0,0	1/1:1,7:8:1.41:13,1,0	1/1:1,9:10:29.99:380,30,0	1/1:2,14:16:15.19:169,15,0	1/1:2,2:4:6.49:96,6,0
chr10	72072302	.	G	GA	3144.70	PASS	AB=0.514;AC=43;AF=0.796;AN=54;BaseQRankSum=1.790;DP=251;FS=8.256;HRun=1;HaplotypeScore=170.1673;InbreedingCoeff=0.3529;MQ=45.52;MQ0=0;MQRankSum=0.134;QD=13.91;ReadPosRankSum=5.053;VQSLOD=2.9736;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,6:7:4.60:93,5,0	0/1:0,7:7:1.88:47,0,2	0/0:2,0:1:2.74:0,3,12	0/0:5,0:5:3.90:0,4,41	0/0:2,8:10:0.60:0,1,5	1/1:1,12:13:14.14:127,14,0	1/1:2,5:7:3.69:92,4,0	1/1:6,3:7:12.04:177,12,0	0/1:0,4:4:0.30:2,0,0	1/1:4,10:13:39.09:582,39,0	1/1:1,7:7:6.88:59,7,0	1/1:0,12:12:20.27:338,20,0	1/1:1,8:9:8.73:144,9,0	0/1:1,8:9:0.36:0,0,3	1/1:2,12:14:15.41:49,15,0	1/1:1,13:14:12.97:83,13,0	1/1:0,6:6:3.01:48,3,0	1/1:0,6:6:10.59:148,11,0	1/1:2,5:6:15.05:239,15,0	1/1:2,10:12:1.44:10,1,0	./.	1/1:2,8:9:0.38:46,0,0	0/1:2,11:13:3.35:6,0,3	0/1:0,1:1:0:0,0,0	1/1:2,8:10:6.38:32,6,0	1/1:0,10:10:30.10:462,30,0	1/1:4,16:20:25.47:328,25,0	1/1:0,4:4:9.03:142,9,0
chr10	72072308	.	G	GA	4115.83	PASS	AB=0.640;AC=47;AF=0.870;AN=54;BaseQRankSum=0.095;DP=294;FS=9.431;HRun=1;HaplotypeScore=187.0450;InbreedingCoeff=0.1902;MQ=49.78;MQ0=0;MQRankSum=-0.494;QD=15.19;ReadPosRankSum=5.441;VQSLOD=3.0826;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:8:4.60:93,5,0	1/1:1,8:9:8.44:143,8,0	0/0:5,0:3:1.25:0,1,3	0/1:6,1:7:31.81:32,0,64	0/0:0,10:10:0.60:0,1,5	1/1:0,15:15:14.14:127,14,0	1/1:1,7:8:6.70:140,7,0	1/1:4,9:11:21.06:305,21,0	1/1:1,5:6:5.71:74,6,0	1/1:1,14:14:39.13:622,39,0	1/1:1,8:8:6.88:59,7,0	1/1:0,12:12:20.27:338,20,0	1/1:0,10:10:8.73:145,9,0	0/1:1,8:10:0.36:0,0,3	1/1:1,14:15:15.41:49,15,0	1/1:2,14:16:12.97:83,13,0	1/1:0,6:7:6.02:96,6,0	1/1:1,6:7:13.55:168,14,0	1/1:0,7:6:15.05:239,15,0	1/1:3,14:17:4.44:35,4,0	./.	1/1:1,12:12:3.39:94,3,0	0/1:1,14:15:0.34:50,0,0	1/1:2,1:3:2.99:24,3,0	1/1:1,10:11:6.49:64,6,0	1/1:1,11:12:36.12:557,36,0	1/1:0,20:20:28.52:402,29,0	1/1:2,4:6:1.17:177,1,0
chr10	72073235	.	TTA	T	965.80	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.609;DP=612;FS=3.695;HRun=0;HaplotypeScore=102.7629;InbreedingCoeff=0.9461;MQ=56.16;MQ0=4;MQRankSum=-0.864;QD=26.10;ReadPosRankSum=0.026;VQSLOD=4.7788;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,35:35:74.46:1061,74,0	0/0:10,0:10:27.05:0,27,450	0/0:15,0:11:9.85:0,10,357	0/0:11,0:8:19.90:0,20,299	0/0:30,0:30:75.60:0,76,1204	0/0:23,0:23:69.22:0,69,1208	0/0:10,0:10:30.09:0,30,510	0/0:35,0:35:96.28:0,96,1605	0/0:15,0:15:45.12:0,45,723	0/0:42,0:42:99:0,117,2050	0/0:27,0:27:72.21:0,72,1181	0/0:21,0:20:57.16:0,57,939	0/0:19,0:19:57.18:0,57,967	0/0:13,0:13:39.10:0,39,606	0/0:18,0:18:47.03:0,47,809	0/0:26,0:26:75.19:0,75,1194	0/0:33,0:33:93.28:0,93,1556	0/0:19,0:17:45.15:0,45,808	0/0:26,0:25:75.24:0,75,1293	0/0:22,0:22:63.13:0,63,1019	0/0:10,0:10:27.03:0,27,421	0/0:13,0:13:36.03:0,36,536	0/0:16,0:16:45.13:0,45,772	0/0:20,0:19:38.67:0,39,675	0/0:27,0:27:78.13:0,78,1257	0/0:31,0:31:90.14:0,90,1457	0/0:29,0:29:87.13:0,87,1406	0/0:14,0:14:42.13:0,42,701
chr10	72073358	.	GTGTGTC	G	253.92	PASS	AB=0.871;AC=7;AF=0.125;AN=56;BaseQRankSum=4.554;DP=734;FS=8.555;HRun=0;HaplotypeScore=150.0954;InbreedingCoeff=-0.1503;MQ=46.99;MQ0=30;MQRankSum=-1.546;QD=1.81;ReadPosRankSum=-4.841;VQSLOD=0.1470;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:32,3:32:91.86:92,0,132	0/0:6,0:6:5.33:0,5,54	0/0:24,0:2:2.97:0,3,21	0/0:26,0:3:6.02:0,6,121	0/0:19,0:19:32.58:0,33,880	0/0:25,0:25:44.76:0,45,1208	0/0:36,0:36:78.15:0,78,1926	0/0:61,0:49:99:0,111,2622	0/0:18,0:17:35.93:0,36,798	0/1:20,0:18:22.47:22,0,232	0/1:13,0:13:6.09:6,0,191	0/1:9,16:26:27.57:43,0,28	0/1:10,16:27:28.19:91,0,28	0/0:14,0:14:30.05:0,30,828	0/0:31,0:30:57.14:0,57,1559	0/0:25,0:25:48.02:0,48,1415	0/0:37,0:36:16.46:0,16,976	0/0:20,1:18:26.23:0,26,529	0/0:25,0:19:28.92:0,29,986	0/0:18,0:18:51.03:0,51,1425	0/0:78,3:79:99:0,173,4903	0/1:12,1:13:18.98:63,0,19	0/1:5,0:6:18.98:63,0,19	0/0:22,22:44:14.93:0,15,208	0/0:15,0:15:10.45:0,10,433	0/0:33,0:27:74.59:0,75,1831	0/0:19,0:19:48.12:0,48,1143	0/0:13,0:13:39.09:0,39,1051
chr10	72074340	.	T	TAC	1781.25	PASS	AB=0.820;AC=18;AF=0.346;AN=52;BaseQRankSum=-6.119;DP=464;FS=4.766;HRun=0;HaplotypeScore=67.8585;InbreedingCoeff=0.5711;MQ=61.80;MQ0=2;MQRankSum=1.441;QD=8.65;ReadPosRankSum=0.431;VQSLOD=2.5627;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,19:35:15.12:204,0,15	0/0:9,0:9:15.04:0,15,166	./.	./.	0/0:17,0:18:20.86:0,21,202	0/0:18,0:20:17.41:0,17,138	0/0:14,0:15:26.67:0,27,257	0/0:25,0:25:8.96:0,9,79	0/1:13,0:13:10.74:11,0,204	0/0:22,0:22:18.03:0,18,191	0/0:25,0:25:24.05:0,24,263	0/0:7,0:9:5.68:0,6,28	0/0:3,0:9:14.11:0,14,68	0/0:5,0:6:14.87:0,15,147	0/1:18,0:20:9.18:9,0,252	0/0:16,0:16:18.03:0,18,199	1/1:14,14:30:3.93:296,4,0	1/1:6,0:11:9:79,9,0	1/1:11,4:15:12:147,12,0	1/1:4,7:11:12.04:181,12,0	1/1:8,12:20:21.07:316,21,0	0/0:7,0:16:28.41:0,28,140	0/0:8,0:14:11.36:0,11,56	0/0:5,0:12:8.52:0,9,42	0/0:10,0:11:9.02:0,9,95	1/1:10,7:18:18.06:268,18,0	0/1:8,10:19:9.11:273,0,9	1/1:3,10:14:12.04:181,12,0
chr10	72075219	.	G	GGA	1159.55	PASS	AB=0.561;AC=8;AF=0.143;AN=56;BaseQRankSum=-0.159;DP=520;FS=7.110;HRun=0;HaplotypeScore=77.8867;InbreedingCoeff=0.5910;MQ=65.13;MQ0=11;MQRankSum=0.695;QD=17.84;ReadPosRankSum=2.262;VQSLOD=2.8001;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:71.84:0,72,853	0/0:7,0:7:21.03:0,21,250	0/0:44,0:26:37.01:0,37,391	0/0:53,1:27:50.41:0,50,588	0/0:14,0:14:36.07:0,36,440	0/0:20,0:19:45.14:0,45,569	0/0:21,0:21:44.92:0,45,506	0/0:18,0:17:36.09:0,36,432	0/0:14,0:13:21.01:0,21,248	0/0:22,0:21:19.23:0,19,473	0/0:7,0:7:14.96:0,15,154	1/1:2,5:7:9.03:144,9,0	0/1:1,7:8:23.04:184,0,23	0/0:14,0:13:20.69:0,21,221	0/0:19,0:17:26.53:0,27,296	0/0:15,0:16:30.01:0,30,345	0/0:16,0:15:11.48:0,11,365	0/0:12,0:12:27.02:0,27,304	0/0:14,0:13:33.05:0,33,388	0/0:15,0:15:27.09:0,27,344	0/0:30,0:30:75.16:0,75,918	0/1:6,13:20:16.37:379,0,16	1/1:7,9:16:30.10:465,30,0	1/1:7,7:14:1.16:126,1,0	0/0:14,0:14:30.09:0,30,378	0/0:22,0:22:48.15:0,48,610	0/0:10,0:9:21.06:0,21,251	0/0:9,0:9:13.89:0,14,256
chr10	72075264	.	G	GGA	104.48	PASS	AB=0.973;AC=9;AF=0.161;AN=56;BaseQRankSum=6.858;DP=446;FS=29.620;HRun=0;HaplotypeScore=76.1492;InbreedingCoeff=0.0948;MQ=46.32;MQ0=46;MQRankSum=-3.949;QD=0.79;ReadPosRankSum=-0.505;VQSLOD=-0.1621;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:23:23.69:0,24,474	0/0:3,0:3:3.01:0,3,40	0/1:54,0:12:4:4,0,136	0/0:78,0:13:12.78:0,13,175	0/0:14,0:14:21.07:0,21,338	0/0:15,0:15:30.01:0,30,425	0/0:13,0:10:24.07:0,24,383	0/0:21,0:14:30.52:0,31,423	0/0:6,0:6:7.89:0,8,105	0/1:15,1:13:55.96:56,0,366	0/0:6,0:6:15:0,15,207	0/1:3,0:3:0.01:0,0,0	0/0:1,0:1:0:0,0,0	0/0:4,0:3:9.03:0,9,147	0/1:10,0:6:1.01:1,0,44	0/0:7,0:6:13.27:0,13,222	0/0:12,0:11:20.06:0,20,297	0/0:11,0:9:18.95:0,19,291	0/0:17,0:10:26.88:0,27,372	0/1:13,1:13:44.11:44,0,99	0/0:32,0:30:68.73:0,69,1021	0/1:9,0:9:15.97:16,0,25	1/1:3,0:2:4.57:48,5,0	0/0:9,0:7:1.23:0,1,40	0/0:19,2:20:5.24:0,5,376	0/1:20,1:17:54.44:54,0,379	0/0:4,0:3:9.03:0,9,141	0/0:9,0:9:18.06:0,18,293
chr10	72075308	.	GGA	G	248.08	PASS	AB=0.910;AC=10;AF=0.179;AN=56;BaseQRankSum=7.569;DP=509;FS=42.479;HRun=0;HaplotypeScore=89.4398;InbreedingCoeff=-0.2530;MQ=42.57;MQ0=35;MQRankSum=-4.398;QD=1.75;ReadPosRankSum=2.016;VQSLOD=-0.2359;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,20:27:99:221,0,260	0/1:3,0:2:12.63:13,0,42	0/0:51,0:8:11.27:0,11,113	0/0:81,0:17:5.06:0,5,103	0/1:4,1:5:10.99:11,0,45	0/1:15,0:13:36.62:37,0,127	0/0:21,0:20:35.93:0,36,646	0/0:36,0:28:36.09:0,36,568	0/0:7,0:6:15.05:0,15,254	0/0:22,1:19:3.61:0,4,486	0/0:11,0:11:12.04:0,12,204	0/0:2,0:2:3.01:0,3,51	0/1:7,1:7:8.96:9,0,67	0/1:6,0:7:10.44:10,0,157	0/0:12,0:11:10.29:0,10,293	0/1:11,0:10:5.21:5,0,116	0/0:11,0:10:21.95:0,22,378	0/0:8,0:7:15.05:0,15,247	0/0:25,0:12:16.30:0,16,229	0/0:12,0:9:18.06:0,18,258	0/0:26,1:25:45.15:0,45,748	0/1:10,1:10:14.40:14,0,89	0/0:15,2:16:0.46:0,0,265	0/0:12,0:8:12.04:0,12,187	0/1:18,1:19:25.97:26,0,362	0/1:25,4:25:36.33:36,0,630	0/0:4,0:3:8.99:0,9,102	0/0:6,0:4:12.04:0,12,204
chr10	72075321	.	AGAGAGG	A	343.09	PASS	AB=0.933;AC=11;AF=0.196;AN=56;BaseQRankSum=8.129;DP=543;FS=52.039;HRun=0;HaplotypeScore=119.9714;InbreedingCoeff=-0.1223;MQ=48.99;MQ0=26;MQRankSum=-4.729;QD=2.17;ReadPosRankSum=2.224;VQSLOD=0.2127;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:33:54.81:0,55,871	1/1:2,0:3:1.39:4,1,0	0/0:60,0:12:29.33:0,29,378	0/0:77,0:18:18.17:0,18,517	0/0:6,0:6:14.87:0,15,206	0/1:10,3:11:99:220,0,292	0/1:19,1:20:14.26:14,0,1612	0/0:37,0:30:41.84:0,42,981	0/0:11,0:10:27.06:0,27,619	0/1:21,0:20:28.16:28,0,1003	0/0:12,1:13:15.48:0,15,385	0/0:6,0:6:15.05:0,15,375	0/0:7,0:6:15.05:0,15,323	0/1:8,1:10:58.36:58,0,472	0/1:11,0:12:1.80:2,0,730	0/1:11,0:10:69.97:70,0,380	0/0:16,0:15:41.91:0,42,1058	0/0:8,0:7:17.73:0,18,421	0/0:28,0:14:24.08:0,24,599	0/0:8,0:7:12.04:0,12,408	0/0:23,0:21:51.18:0,51,1653	0/1:18,0:15:21.55:22,0,194	0/0:18,1:19:1.26:0,1,836	0/0:14,0:10:20.35:0,20,447	0/1:19,1:19:50.92:51,0,756	0/1:28,0:24:9.23:9,0,1134	0/0:4,0:3:9.03:0,9,300	0/0:7,0:6:18.06:0,18,515
chr10	72076340	.	G	GGA	545.50	PASS	AB=0.985;AC=15;AF=0.268;AN=56;BaseQRankSum=5.973;DP=423;FS=30.774;HRun=0;HaplotypeScore=89.1966;InbreedingCoeff=-0.3181;MQ=41.01;MQ0=18;MQRankSum=-5.651;QD=2.01;ReadPosRankSum=2.119;VQSLOD=0.1424;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:4.37:0,4,82	0/1:10,0:10:15.21:15,0,48	1/1:27,0:6:5.81:23,6,0	0/1:30,0:6:15.77:16,0,31	0/0:18,0:17:3.02:0,3,46	0/0:13,0:12:4.58:0,5,77	0/1:14,0:12:25.78:26,0,83	0/0:20,0:15:0.69:0,1,300	0/1:8,2:9:28.64:29,0,65	0/1:26,1:25:87.36:261,0,87	0/0:20,0:22:1.56:0,2,4	0/0:7,0:6:0.58:0,1,2	0/1:10,0:10:41.48:47,0,41	0/0:8,0:8:2.59:0,3,22	0/0:12,0:9:8.03:0,8,26	0/0:13,1:13:2.19:0,2,56	0/0:3,0:3:4.56:0,5,42	0/0:2,0:2:1.59:0,2,7	0/1:12,0:9:13.91:14,0,229	0/1:16,0:15:12.55:13,0,14	0/0:6,0:3:9:0,9,106	0/1:26,0:26:21.89:22,0,150	0/1:21,0:20:6.15:6,0,87	0/0:5,0:5:3.01:0,3,46	0/1:24,0:23:29.80:30,0,209	0/1:24,0:25:99:106,0,301	0/0:12,2:13:25.59:0,26,180	0/1:16,0:14:78.19:78,0,181
chr10	72076352	.	G	GGAA	423.98	PASS	AB=0.983;AC=15;AF=0.268;AN=56;BaseQRankSum=6.605;DP=548;FS=55.959;HRun=0;HaplotypeScore=117.3490;InbreedingCoeff=-0.2500;MQ=54.03;MQ0=20;MQRankSum=-6.340;QD=1.46;ReadPosRankSum=2.385;VQSLOD=-0.0292;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:10:13.75:14,0,226	0/1:12,1:12:99:112,0,184	0/0:51,0:17:21.99:0,22,288	0/0:60,0:18:26.22:0,26,355	0/0:20,0:19:2.58:0,3,81	0/1:16,0:15:23.94:24,0,203	0/0:17,0:14:23.71:0,24,334	0/0:26,0:21:57.44:0,57,829	0/0:10,0:9:14.19:0,14,210	0/1:30,2:29:56.35:56,0,533	0/1:26,1:27:35.87:36,0,245	0/0:10,0:9:10.21:0,10,131	0/0:10,0:10:10.29:0,10,151	1/1:8,0:8:3.03:22,3,0	0/0:13,0:10:1.82:0,2,43	0/1:16,1:16:38.76:39,0,266	0/0:5,0:5:13.12:0,13,178	0/0:3,0:3:8.74:0,9,89	0/0:15,0:12:34.58:0,35,504	0/1:21,0:20:3.95:4,0,314	0/0:11,0:8:21.07:0,21,381	0/1:31,0:31:19.34:19,0,312	0/1:22,0:21:20.03:20,0,218	0/0:6,0:6:9.45:0,9,106	0/1:27,0:26:73.96:74,0,525	0/1:29,0:29:4.23:4,0,592	0/1:15,0:14:7.64:8,0,367	0/1:23,0:21:99:140,0,675
chr10	72078261	.	CTT	C	1742.01	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=1.529;DP=495;FS=6.876;HRun=5;HaplotypeScore=79.9533;InbreedingCoeff=0.9001;MQ=51.35;MQ0=20;MQRankSum=-2.891;QD=26.00;ReadPosRankSum=-0.219;VQSLOD=2.0937;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:6.45:0,6,91	0/0:8,0:8:23.86:0,24,288	0/0:9,0:3:9.03:0,9,116	0/0:17,0:7:0.02:0,0,118	0/0:25,0:24:60.60:0,61,897	0/0:14,0:10:30.09:0,30,475	0/0:18,0:18:42.80:0,43,611	0/0:28,0:28:65.08:0,65,969	0/0:16,0:14:35.93:0,36,506	0/0:25,0:24:59.77:0,60,833	0/0:16,0:14:42.10:0,42,544	1/1:10,5:14:38.16:467,38,0	1/1:9,1:10:27.05:304,27,0	0/0:6,0:6:16.94:0,17,193	0/0:14,0:14:32.93:0,33,475	0/0:13,0:13:33.11:0,33,539	0/0:28,0:27:62.95:0,63,719	0/0:23,0:23:46.04:0,46,606	0/0:24,0:20:51.12:0,51,748	0/0:13,0:13:36.08:0,36,574	0/0:12,0:12:25.88:0,26,347	1/1:1,7:8:20.93:229,21,0	1/1:9,2:11:21.39:235,21,0	1/1:14,9:23:39.22:679,39,0	0/0:31,0:28:71.98:0,72,856	0/0:23,0:22:56.70:0,57,775	0/0:30,0:29:78.14:0,78,1101	0/0:6,0:6:14.87:0,15,176
chr10	72078267	.	CTTT	C	1491.02	PASS	AB=0.770;AC=16;AF=0.286;AN=56;BaseQRankSum=8.024;DP=493;FS=6.097;HRun=18;HaplotypeScore=89.1547;InbreedingCoeff=0.5701;MQ=49.46;MQ0=20;MQRankSum=1.404;QD=7.77;ReadPosRankSum=5.676;VQSLOD=-0.6218;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:18.67:0,19,127	1/1:2,7:9:14.71:134,15,0	0/0:7,0:2:0:0,0,0	0/0:14,0:6:0:0,0,1	0/0:20,0:22:34.09:0,34,340	0/0:13,0:9:12.02:0,12,162	0/0:16,0:17:22.27:0,22,284	0/0:26,0:28:36.02:0,36,359	0/0:16,0:14:32.94:0,33,459	1/1:11,15:25:29.95:293,30,0	1/1:7,9:14:26.48:246,26,0	0/1:13,1:15:20.04:45,0,20	1/1:8,0:9:7.85:53,8,0	0/0:6,0:6:16.79:0,17,166	0/0:10,0:13:32.89:0,33,351	0/0:11,0:13:15.91:0,16,201	1/1:9,19:27:41.71:411,42,0	0/1:16,1:26:17.85:18,0,78	0/0:20,0:16:14.96:0,15,142	0/0:12,1:13:3.42:0,3,366	0/0:9,0:11:19.07:0,19,170	0/1:7,0:9:4.84:7,0,5	0/0:9,0:11:10.46:0,10,39	0/1:13,2:22:26.48:78,0,26	1/1:12,17:27:40.74:388,41,0	0/0:21,1:21:3.52:0,4,303	0/0:27,0:27:38.79:0,39,423	0/0:7,0:9:20.74:0,21,202
chr10	72080466	.	A	ATTCGCCACC	13596.26	PASS	AB=0.905;AC=23;AF=0.411;AN=56;BaseQRankSum=-4.747;DP=471;FS=7.537;HRun=0;HaplotypeScore=125.5184;InbreedingCoeff=0.9150;MQ=93.76;MQ0=0;MQRankSum=-15.057;QD=75.96;ReadPosRankSum=-0.037;VQSLOD=4.7133;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,6:21:30.10:1169,30,0	1/1:5,1:6:12.04:426,12,0	0/0:24,0:24:60.19:0,60,1534	0/0:23,0:23:57.17:0,57,1398	0/0:8,0:8:24.08:0,24,647	0/0:25,0:25:75.26:0,75,2187	0/0:27,0:27:81.24:0,81,2268	0/0:24,0:24:63.20:0,63,1742	0/0:13,0:13:39.13:0,39,1069	1/1:5,9:15:39.13:1759,39,0	1/1:3,5:9:21.07:895,21,0	1/1:13,8:20:48.16:1914,48,0	1/1:1,8:10:26.66:1264,27,0	0/0:13,0:13:39.13:0,39,1157	0/0:10,0:10:30.10:0,30,919	0/0:17,0:17:51.18:0,51,1516	1/1:6,11:21:39.13:1703,39,0	0/0:17,0:17:51.18:0,51,1498	0/0:13,0:12:36.12:0,36,1066	0/0:10,0:10:27.09:0,27,814	0/0:44,0:44:99:0,132,3947	1/1:3,2:8:12.04:471,12,0	1/1:6,6:14:30.10:1173,30,0	1/1:4,13:21:23.22:1118,23,0	1/1:5,8:14:36.08:1471,36,0	0/1:17,2:19:99:233,0,1442	0/0:17,0:17:51.16:0,51,1429	0/0:7,0:7:21.07:0,21,643
chr10	72082727	.	TGA	T	3438.62	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.740;DP=445;FS=3.382;HRun=0;HaplotypeScore=56.5814;InbreedingCoeff=0.9296;MQ=79.31;MQ0=0;MQRankSum=-1.964;QD=38.64;ReadPosRankSum=2.134;VQSLOD=5.4594;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:69.23:989,69,0	0/0:6,0:6:18.06:0,18,329	0/0:12,0:12:30.10:0,30,519	0/0:10,0:11:20.30:0,20,323	0/0:10,0:10:30.10:0,30,550	0/0:16,0:16:48.16:0,48,874	0/0:23,0:23:63.20:0,63,1118	0/0:21,0:21:63.22:0,63,1149	0/0:14,0:14:36.12:0,36,660	0/0:11,0:11:33.11:0,33,603	0/0:4,0:4:12.04:0,12,220	1/1:0,17:17:42.14:602,42,0	1/1:0,14:14:39.13:559,39,0	0/0:17,0:17:48.15:0,48,849	0/0:18,0:18:54.17:0,54,960	0/0:13,0:13:36.12:0,36,660	0/0:29,0:29:87.30:0,87,1595	0/0:42,1:43:84.91:0,85,2213	0/0:20,0:20:54.19:0,54,988	0/0:6,0:6:18.06:0,18,314	0/0:32,0:32:96.32:0,96,1694	1/1:0,4:4:9.03:129,9,0	1/1:0,3:3:9.03:129,9,0	1/1:0,26:26:72.24:1032,72,0	0/0:6,0:6:18.06:0,18,330	0/0:19,0:19:57.19:0,57,1026	0/0:24,0:24:72.23:0,72,1290	0/0:1,0:1:3.01:0,3,55
chr10	72083353	.	C	CT	8341.85	PASS	AC=54;AF=0.964;AN=56;BaseQRankSum=4.875;DP=403;FS=10.392;HRun=3;HaplotypeScore=323.1367;InbreedingCoeff=0.6511;MQ=44.23;MQ0=0;MQRankSum=-0.249;QD=20.91;ReadPosRankSum=2.759;VQSLOD=1.9411;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,16:31:47.87:488,48,0	1/1:1,2:3:9.02:99,9,0	1/1:3,0:3:2.74:12,3,0	0/0:4,0:4:10.41:0,10,49	1/1:3,9:12:7.08:46,7,0	1/1:0,17:17:48.04:480,48,0	1/1:3,11:14:36.04:361,36,0	1/1:8,9:17:38.65:460,39,0	1/1:5,15:20:54:526,54,0	1/1:6,7:13:31.56:321,32,0	1/1:3,4:7:10.21:96,10,0	1/1:4,17:21:49.96:503,50,0	1/1:2,8:10:23.51:219,24,0	1/1:3,17:20:33.24:354,33,0	1/1:3,7:10:21.05:214,21,0	1/1:6,14:20:36.32:389,36,0	1/1:4,12:16:24.68:274,25,0	1/1:6,10:16:29.52:354,30,0	1/1:4,14:18:49.03:578,49,0	1/1:0,10:10:15.89:179,16,0	1/1:5,6:11:10.98:110,11,0	1/1:3,7:10:14.72:137,15,0	1/1:1,13:14:24.88:213,25,0	1/1:7,12:19:19.89:200,20,0	1/1:5,11:16:33.11:313,33,0	1/1:2,21:23:66.20:787,66,0	1/1:12,8:20:25.60:353,26,0	1/1:0,8:8:24.07:278,24,0
chr10	72083366	.	T	TC	12084.19	PASS	AC=52;AF=1.000;AN=52;DP=404;FS=0.000;HRun=3;HaplotypeScore=362.7110;InbreedingCoeff=-0.0060;MQ=34.13;MQ0=0;QD=30.14;VQSLOD=2.4107;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:69.23:963,69,0	1/1:2,4:6:15.05:209,15,0	./.	./.	1/1:3,9:12:21.07:293,21,0	1/1:5,17:22:54.18:750,54,0	1/1:1,16:17:45.15:628,45,0	1/1:7,9:16:33.02:417,33,0	1/1:2,17:19:51.13:690,51,0	1/1:0,9:10:27.08:363,27,0	1/1:1,10:11:18.04:251,18,0	1/1:4,19:23:53.90:710,54,0	1/1:0,9:9:24.08:335,24,0	1/1:3,18:21:39.13:544,39,0	1/1:3,9:12:30.06:397,30,0	1/1:3,13:16:39.13:545,39,0	1/1:7,14:21:24.04:313,24,0	1/1:1,14:15:39.13:545,39,0	1/1:4,13:17:42.14:583,42,0	1/1:3,9:12:18.06:251,18,0	1/1:2,5:7:6.02:84,6,0	1/1:2,8:10:21.03:271,21,0	1/1:1,12:13:24.08:334,24,0	1/1:3,16:19:24.05:335,24,0	1/1:2,14:16:33.11:458,33,0	1/1:2,23:25:72.24:1000,72,0	1/1:4,12:16:42.10:565,42,0	1/1:2,7:9:18.06:251,18,0
chr10	72083375	.	A	AC	6444.74	PASS	AC=52;AF=1.000;AN=52;DP=362;FS=0.000;HRun=4;HaplotypeScore=367.9849;InbreedingCoeff=-0.0111;MQ=34.40;MQ0=0;QD=17.90;VQSLOD=1.6929;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,18:25:50.98:471,51,0	1/1:2,4:6:14.93:120,15,0	./.	./.	1/1:1,9:10:21.03:220,21,0	1/1:6,14:20:42:393,42,0	1/1:5,12:17:36:331,36,0	1/1:6,4:10:12.01:112,12,0	1/1:5,10:15:30.04:304,30,0	1/1:3,8:11:23.99:228,24,0	1/1:1,8:9:20.99:217,21,0	1/1:10,13:23:41.88:357,42,0	1/1:4,5:9:15.02:164,15,0	1/1:9,11:20:32.99:311,33,0	1/1:0,9:9:27.01:262,27,0	1/1:3,10:13:30.04:304,30,0	1/1:4,13:17:27.04:265,27,0	1/1:5,11:16:33:309,33,0	1/1:8,6:14:15.03:167,15,0	1/1:6,5:11:12.01:124,12,0	1/1:2,3:5:6.01:58,6,0	1/1:3,5:8:14.98:136,15,0	1/1:7,5:12:15.02:154,15,0	1/1:7,9:16:20.89:197,21,0	1/1:5,10:15:26.50:221,27,0	1/1:8,18:26:54.09:550,54,0	1/1:2,13:15:36.02:351,36,0	1/1:4,4:8:12.01:119,12,0
chr10	72083386	.	T	TTC	5304.41	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=1.324;DP=296;FS=0.000;HRun=0;HaplotypeScore=362.4999;InbreedingCoeff=0.6068;MQ=35.58;MQ0=0;MQRankSum=-0.618;QD=18.04;ReadPosRankSum=1.576;VQSLOD=3.8962;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:21:49.96:285,50,0	1/1:0,5:5:14.64:92,15,0	./.	0/0:2,0:2:2.98:0,3,23	1/1:4,9:13:8.54:147,9,0	1/1:5,13:18:51.78:345,52,0	1/1:4,12:16:38.97:283,39,0	1/1:4,4:8:21:189,21,0	1/1:1,10:11:25.39:150,25,0	1/1:2,8:10:29.95:267,30,0	1/1:2,7:9:19.43:114,19,0	1/1:4,14:18:42.46:299,42,0	1/1:2,5:7:18.16:117,18,0	1/1:3,12:15:40.31:225,40,0	1/1:1,9:10:29.42:196,29,0	1/1:3,10:13:35.46:238,35,0	1/1:1,13:14:35.27:256,35,0	1/1:1,11:12:32.86:276,33,0	1/1:2,6:8:17.51:151,18,0	1/1:0,5:5:13.62:91,14,0	1/1:2,3:5:8.69:68,9,0	1/1:2,5:7:17.37:99,17,0	1/1:1,6:7:20.45:145,20,0	1/1:1,9:10:25.58:154,26,0	1/1:1,9:10:21.56:156,22,0	1/1:6,18:24:69.69:585,70,0	1/1:1,13:14:38.03:270,38,0	1/1:0,4:4:12:108,12,0
chr10	72083391	.	T	TA	11928.82	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=2.585;DP=334;FS=3.022;HRun=1;HaplotypeScore=338.7577;InbreedingCoeff=0.7001;MQ=39.99;MQ0=0;MQRankSum=-1.209;QD=36.04;ReadPosRankSum=2.684;VQSLOD=3.5143;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:57.08:794,57,0	1/1:0,5:5:15.05:223,15,0	0/1:3,0:2:0:0,0,0	0/0:3,0:3:4.26:0,4,42	1/1:1,14:15:23.15:350,23,0	1/1:2,18:20:57.16:824,57,0	1/1:0,16:16:45.15:669,45,0	1/1:1,8:9:24.08:358,24,0	1/1:0,11:11:33.11:488,33,0	1/1:3,10:13:36.12:518,36,0	1/1:1,9:10:27.05:359,27,0	1/1:0,18:18:45.15:669,45,0	1/1:3,7:10:24:290,24,0	1/1:2,16:18:45.11:625,45,0	1/1:2,10:12:27.09:398,27,0	1/1:1,13:14:39.13:575,39,0	1/1:1,14:15:39.13:578,39,0	1/1:0,12:12:30.10:445,30,0	1/1:1,8:9:21.07:296,21,0	1/1:1,5:6:15.05:213,15,0	1/1:1,6:7:12:146,12,0	1/1:0,7:7:18.06:265,18,0	1/1:2,7:9:23.99:294,24,0	1/1:2,10:12:21.03:299,21,0	1/1:0,10:10:30.06:415,30,0	1/1:4,24:28:75.17:1039,75,0	1/1:0,15:15:45.12:634,45,0	1/1:1,3:4:12.04:163,12,0
chr10	72083401	.	G	GA	11552.01	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.700;DP=357;FS=8.490;HRun=3;HaplotypeScore=344.3016;InbreedingCoeff=0.8060;MQ=41.56;MQ0=0;MQRankSum=-3.438;QD=33.01;ReadPosRankSum=0.912;VQSLOD=1.5272;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:63.20:837,63,0	1/1:0,5:5:15.05:209,15,0	0/0:4,0:3:6.01:0,6,60	0/0:3,0:3:5.88:0,6,42	1/1:1,16:17:39.11:468,39,0	1/1:2,22:24:63.21:850,63,0	1/1:2,10:12:30.10:406,30,0	1/1:3,9:12:21.06:290,21,0	1/1:1,12:13:36.10:471,36,0	1/1:2,12:14:39.13:536,39,0	1/1:1,10:11:27.08:339,27,0	1/1:4,14:18:45.15:610,45,0	1/1:1,9:10:27.09:362,27,0	1/1:1,18:19:54.17:693,54,0	1/1:2,9:11:27.09:369,27,0	1/1:0,15:15:45.06:581,45,0	1/1:1,14:15:42.10:564,42,0	1/1:2,11:13:27.09:377,27,0	1/1:3,9:12:21.07:288,21,0	1/1:1,6:7:21.07:269,21,0	1/1:2,7:9:18.06:244,18,0	1/1:1,6:7:21.02:254,21,0	1/1:0,9:9:27.03:304,27,0	1/1:4,11:15:24.03:319,24,0	1/1:1,8:9:24.07:301,24,0	1/1:6,24:30:75.25:1042,75,0	1/1:3,11:14:36.12:486,36,0	1/1:2,2:4:6.02:84,6,0
chr10	72083413	.	TG	T	6641.08	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.961;DP=339;FS=1.791;HRun=8;HaplotypeScore=315.6051;InbreedingCoeff=0.7408;MQ=44.39;MQ0=0;MQRankSum=-3.827;QD=20.06;ReadPosRankSum=2.810;VQSLOD=-0.0833;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:24:54.07:517,54,0	1/1:1,5:6:12.01:114,12,0	0/0:5,0:4:8.98:0,9,78	0/0:3,0:3:6.01:0,6,59	1/1:1,16:17:24.03:228,24,0	1/1:3,20:23:54.07:516,54,0	1/1:1,10:11:21.03:201,21,0	1/1:9,5:14:8.99:86,9,0	1/1:2,9:11:24.02:229,24,0	1/1:2,11:13:33.05:317,33,0	1/1:1,9:10:18.01:173,18,0	1/1:3,13:16:36.05:345,36,0	1/1:1,9:10:27.02:250,27,0	1/1:2,14:16:41.95:378,42,0	1/1:1,9:10:24.03:228,24,0	1/1:1,11:12:30.04:286,30,0	1/1:3,13:16:36.04:346,36,0	1/1:4,5:9:18.01:173,18,0	1/1:2,8:10:18.03:173,18,0	1/1:1,5:6:12.02:115,12,0	1/1:0,9:9:18.03:173,18,0	1/1:1,9:10:24.04:230,24,0	1/1:3,8:11:11.99:107,12,0	1/1:2,12:14:26.99:257,27,0	1/1:2,7:9:15.02:145,15,0	1/1:6,23:29:69.10:663,69,0	1/1:0,13:13:39.01:364,39,0	1/1:1,1:2:3:29,3,0
chr10	72083460	.	C	CT	15892.71	PASS	AB=0.769;AC=55;AF=0.982;AN=56;BaseQRankSum=-0.932;DP=395;FS=2.919;HRun=0;HaplotypeScore=148.5632;InbreedingCoeff=-0.0276;MQ=64.95;MQ0=0;MQRankSum=-2.370;QD=40.23;ReadPosRankSum=1.665;VQSLOD=4.1721;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:48.06:733,48,0	1/1:0,3:3:9.03:143,9,0	1/1:1,4:5:9.03:142,9,0	0/1:7,3:10:40.51:165,0,41	1/1:0,13:13:27.09:430,27,0	1/1:0,17:17:39.13:620,39,0	1/1:0,19:19:57.19:909,57,0	1/1:0,23:23:69.23:1075,69,0	1/1:0,18:18:45.15:698,45,0	1/1:0,16:16:45.13:692,45,0	1/1:0,7:7:14.98:209,15,0	1/1:0,24:24:69.24:1097,69,0	1/1:1,10:11:30.10:478,30,0	1/1:0,15:15:39.13:620,39,0	1/1:0,16:16:45.15:717,45,0	1/1:1,8:9:24.08:382,24,0	1/1:0,18:18:45.15:708,45,0	1/1:0,16:16:45.15:718,45,0	1/1:0,10:10:30.10:466,30,0	1/1:0,8:8:21.07:335,21,0	1/1:1,25:26:57.67:910,58,0	1/1:1,16:17:36.12:572,36,0	1/1:0,8:8:15.05:238,15,0	1/1:0,22:22:60.20:946,60,0	1/1:0,11:11:27.09:430,27,0	1/1:1,22:23:66.14:981,66,0	1/1:0,10:10:24.08:383,24,0	1/1:0,2:2:6.02:96,6,0
chr10	72085191	.	AT	A	962.37	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.443;DP=504;FS=11.186;HRun=3;HaplotypeScore=65.6596;InbreedingCoeff=0.9171;MQ=76.07;MQ0=0;MQRankSum=1.575;QD=14.15;ReadPosRankSum=4.384;VQSLOD=1.7440;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:33.05:0,33,209	0/0:11,0:11:26.83:0,27,231	0/0:27,0:15:27.41:0,27,258	0/0:30,0:23:1.13:0,1,283	0/0:24,0:24:55.09:0,55,546	0/0:27,0:27:56.70:0,57,612	0/0:20,0:20:52.12:0,52,551	0/0:27,0:27:65.02:0,65,612	0/0:14,0:14:37.25:0,37,365	0/0:15,0:15:26.99:0,27,262	0/0:19,0:18:34.93:0,35,287	1/1:3,12:15:20.16:272,20,0	1/1:6,4:10:29.83:261,30,0	0/0:12,0:12:27.82:0,28,279	0/0:20,0:20:51.59:0,52,471	0/0:23,0:23:66.87:0,67,778	0/0:22,0:22:42:0,42,442	0/0:8,0:8:17.97:0,18,163	0/0:21,0:22:31.73:0,32,422	0/0:22,0:22:54.25:0,54,526	0/0:4,0:4:6:0,6,53	1/1:1,10:10:17.85:164,18,0	1/1:5,12:17:16.71:156,17,0	1/1:1,14:15:26.98:280,27,0	0/0:12,0:12:27.82:0,28,275	0/0:26,0:26:67.30:0,67,636	0/0:21,0:21:53.82:0,54,426	0/0:12,0:12:30.48:0,30,308
chr10	72085193	.	TTA	T	369.70	PASS	AB=0.917;AC=7;AF=0.125;AN=56;BaseQRankSum=7.833;DP=501;FS=7.987;HRun=0;HaplotypeScore=70.8127;InbreedingCoeff=0.5029;MQ=75.45;MQ0=0;MQRankSum=0.807;QD=5.28;ReadPosRankSum=4.777;VQSLOD=1.2396;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:31.89:0,32,272	0/0:10,0:10:29.18:0,29,319	0/0:27,0:15:17.83:0,18,276	0/0:30,0:22:17.41:0,17,344	0/0:23,0:23:53.52:0,54,795	0/0:24,0:24:59.80:0,60,946	0/0:21,0:21:61.30:0,61,813	0/0:26,0:26:69.08:0,69,792	0/0:15,0:15:44.97:0,45,557	0/0:13,0:13:30.07:0,30,394	0/0:20,0:19:46.61:0,47,451	1/1:13,1:14:4.51:100,5,0	0/1:10,2:12:11.80:163,0,12	0/0:13,0:13:35.97:0,36,455	0/0:19,0:19:56.98:0,57,692	0/0:23,0:23:69.17:0,69,1137	0/0:20,0:20:48.06:0,48,639	0/0:8,0:8:22.55:0,23,253	0/0:23,0:23:46.43:0,46,649	0/0:22,0:22:64.14:0,64,805	0/0:4,0:4:11.99:0,12,115	0/1:12,0:11:20.50:49,0,21	0/1:15,2:17:5.52:88,0,6	1/1:14,1:15:18.52:104,19,0	0/0:12,0:12:35.92:0,36,450	0/0:25,0:25:68.26:0,68,873	0/0:21,0:21:56.84:0,57,647	0/0:13,0:13:33.04:0,33,482
chr10	72085323	.	C	CAAGTGCTTATGAAATAT	1826.02	PASS	AB=0.757;AC=30;AF=0.938;AN=32;BaseQRankSum=-2.199;DP=40;FS=6.368;HRun=0;HaplotypeScore=20.0617;InbreedingCoeff=-0.2312;MQ=126.21;MQ0=0;MQRankSum=-2.276;QD=55.33;ReadPosRankSum=-0.270;VQSLOD=1.1713;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:3.01:74,3,0	./.	0/1:3,0:5:14.72:263,0,15	0/1:3,1:4:38.50:267,0,39	1/1:0,0:1:3.01:132,3,0	1/1:3,0:3:3.01:75,3,0	./.	./.	./.	1/1:1,0:1:3.01:37,3,0	1/1:2,0:2:3.01:38,3,0	1/1:2,0:2:6.02:77,6,0	1/1:0,0:1:3.01:134,3,0	1/1:2,0:2:6.02:90,6,0	./.	./.	./.	./.	1/1:2,0:3:9.03:314,9,0	1/1:1,0:1:3.01:50,3,0	./.	1/1:1,0:1:3.01:78,3,0	1/1:2,0:3:6.01:195,6,0	./.	./.	1/1:1,0:1:3.01:53,3,0	1/1:1,0:1:3.01:39,3,0	./.
chr10	72086496	.	C	CT	2244.47	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.927;DP=674;FS=6.273;HRun=1;HaplotypeScore=110.1043;InbreedingCoeff=0.9938;MQ=76.45;MQ0=0;MQRankSum=-15.650;QD=18.86;ReadPosRankSum=-2.099;VQSLOD=3.0371;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,16:24:33.69:409,34,0	0/0:12,0:12:36.12:0,36,467	0/0:23,0:22:20.84:0,21,416	0/0:15,0:14:18.76:0,19,295	0/0:22,0:22:63.17:0,63,787	0/0:26,0:25:78.23:0,78,984	0/0:21,0:21:60.19:0,60,779	0/0:43,0:43:99:0,126,1624	0/0:26,0:26:78.24:0,78,996	0/0:35,0:35:99:0,102,1325	0/0:17,0:17:51.17:0,51,662	1/1:2,23:25:74.81:635,75,0	1/1:5,13:18:50.56:412,51,0	0/0:20,0:20:60.20:0,60,779	0/0:35,0:35:99:0,105,1364	0/0:29,0:29:87.27:0,87,1115	0/0:26,0:26:65.55:0,66,876	0/0:14,0:14:39.13:0,39,506	0/0:19,0:19:54.18:0,54,701	0/0:28,0:28:84.27:0,84,1090	0/0:45,0:45:99:0,132,1671	1/1:5,27:32:83.49:679,83,0	1/1:0,5:5:14.86:107,15,0	1/1:0,15:15:23.35:190,23,0	0/0:24,0:24:69.22:0,69,896	0/0:25,0:25:72.23:0,72,935	0/0:35,0:35:99:0,105,1348	0/0:14,0:14:33.11:0,33,428
chr10	72086500	.	TAACA	T	3632.97	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=14.968;DP=663;FS=5.033;HRun=0;HaplotypeScore=137.9312;InbreedingCoeff=0.9106;MQ=74.63;MQ0=0;MQRankSum=-13.957;QD=31.05;ReadPosRankSum=-0.528;VQSLOD=3.5194;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:39.08:487,39,0	0/0:13,0:13:39.08:0,39,963	0/0:20,0:18:26.30:0,26,679	0/1:15,0:14:7.36:7,0,488	0/0:22,0:22:63.22:0,63,1671	0/0:26,0:25:78.27:0,78,2133	0/0:22,0:22:63.22:0,63,1719	0/0:45,0:45:99:0,135,3556	0/0:26,0:26:78.27:0,78,2129	0/0:36,0:36:99:0,108,2978	0/0:19,0:19:57.20:0,57,1591	1/1:0,23:23:69.23:961,69,0	1/1:2,14:16:45.14:597,45,0	0/0:20,0:20:60.20:0,60,1601	0/0:35,0:35:99:0,102,2854	0/0:27,0:27:81.28:0,81,2227	0/0:25,0:25:75.09:0,75,1994	0/0:14,0:14:42.14:0,42,1069	0/0:18,0:18:54.17:0,54,1419	0/0:29,0:29:84.29:0,84,2302	0/0:48,0:48:99:0,141,3935	1/1:0,27:27:78.25:1105,78,0	1/1:0,5:5:15.05:183,15,0	1/1:2,13:15:22.35:293,22,0	0/0:26,0:26:78.27:0,78,2182	0/0:26,0:26:75.26:0,75,2021	0/0:35,0:35:99:0,105,2839	0/0:14,0:14:42.14:0,42,1130
chr10	72087921	.	AT	A	4740.05	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=11.479;DP=592;FS=5.222;HRun=10;HaplotypeScore=64.5079;InbreedingCoeff=0.9454;MQ=84.12;MQ0=0;MQRankSum=-1.226;QD=21.07;ReadPosRankSum=3.740;VQSLOD=5.9147;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:32:74.98:651,75,0	0/0:9,0:9:24.06:0,24,266	0/0:26,0:25:44.29:0,44,499	0/0:16,1:16:2.26:0,2,197	0/0:29,0:29:75.18:0,75,812	0/0:21,0:21:48.12:0,48,524	0/0:19,1:20:28.07:0,28,529	0/0:39,0:39:78.08:0,78,1058	0/0:17,0:17:51.12:0,51,555	1/1:5,21:26:62.97:547,63,0	1/1:4,19:23:50.97:443,51,0	1/1:1,16:17:44.99:391,45,0	1/1:2,17:19:47.99:417,48,0	0/0:17,0:17:45.11:0,45,490	0/0:28,1:29:49.14:0,49,764	0/0:12,0:12:4.16:0,4,273	1/1:3,22:25:59.99:521,60,0	0/0:14,0:14:36.08:0,36,388	0/0:24,0:24:44.95:0,45,472	0/0:31,0:31:81.17:0,81,875	0/0:13,0:13:39.11:0,39,431	1/1:2,23:25:68.98:599,69,0	1/1:0,19:19:44.99:391,45,0	1/1:3,22:25:59.98:521,60,0	1/1:2,12:14:29.98:260,30,0	0/0:17,1:18:13.06:0,13,372	0/0:23,0:23:66.15:0,66,718	0/0:7,0:7:21.06:0,21,232
chr10	72088204	.	A	AC	9556.67	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=4.551;DP=690;FS=4.178;HRun=1;HaplotypeScore=224.0381;InbreedingCoeff=-0.1952;MQ=73.36;MQ0=0;MQRankSum=-7.014;QD=13.85;ReadPosRankSum=12.853;VQSLOD=2.5511;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:63,0:63:27.20:816,27,0	1/1:11,0:11:6.06:182,6,0	0/1:22,0:22:86.82:87,0,114	0/1:22,0:22:40.90:200,0,41	0/1:18,0:18:66.73:175,0,67	0/1:17,0:17:1.04:250,0,1	1/1:30,0:30:35.16:486,35,0	0/1:34,0:34:99:335,0,115	1/1:24,0:24:26.66:419,27,0	1/1:30,0:30:87.31:554,87,0	1/1:15,1:16:28.57:325,29,0	1/1:33,0:33:41.07:591,41,0	1/1:15,0:15:1.47:212,1,0	1/1:29,0:29:32.50:435,32,0	1/1:34,0:34:91.67:625,92,0	1/1:37,0:37:55.60:669,56,0	0/1:28,0:28:45.15:255,0,45	0/1:21,0:21:2.56:270,0,3	1/1:20,0:20:9.93:253,10,0	1/1:17,2:19:27.58:337,28,0	0/1:26,0:26:82.40:191,0,82	1/1:16,1:17:34.68:257,35,0	1/1:16,1:17:7.46:175,7,0	0/1:25,0:25:62.07:144,0,62	1/1:20,0:20:49.89:328,50,0	1/1:30,1:31:11.99:461,12,0	1/1:25,0:25:38.60:411,39,0	1/1:6,0:6:17.68:112,18,0
chr10	72088704	.	CT	C	35.72	PASS	AB=0.883;AC=9;AF=0.161;AN=56;BaseQRankSum=2.538;DP=551;FS=5.042;HRun=14;HaplotypeScore=88.9694;InbreedingCoeff=-0.0375;MQ=71.41;MQ0=1;MQRankSum=0.084;QD=0.23;ReadPosRankSum=0.843;VQSLOD=-0.5662;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:30:21.96:0,22,252	1/1:5,1:6:2.87:20,3,0	0/0:12,0:10:11.66:0,12,86	0/0:15,0:11:11.82:0,12,84	0/0:16,0:16:24:0,24,215	0/0:19,1:23:21.11:0,21,303	0/0:22,0:25:33.38:0,33,466	0/1:24,5:30:18.38:18,0,327	0/1:15,3:18:22.37:22,0,212	0/0:26,1:27:33.56:0,34,411	0/0:13,0:13:24.02:0,24,219	0/1:13,2:15:29.93:30,0,81	0/0:19,0:19:31.26:0,31,176	0/0:13,0:13:30.03:0,30,278	0/0:19,0:20:47.81:0,48,414	0/0:18,2:20:12.46:0,12,258	0/0:33,4:39:4.46:0,4,539	0/0:19,1:20:31.16:0,31,402	0/0:20,0:21:30.30:0,30,286	0/1:14,3:17:14.17:14,0,155	0/1:14,3:17:25.75:26,0,204	0/0:19,0:19:16.64:0,17,131	0/1:21,1:22:27.05:27,0,77	0/1:25,2:27:12.46:12,0,172	0/0:16,2:17:0.91:0,1,282	0/0:12,1:14:20.69:0,21,165	0/0:18,0:21:26.69:0,27,218	0/0:11,0:13:29.64:0,30,233
chr10	72088948	.	G	GA	1853.79	PASS	AB=0.896;AC=20;AF=0.357;AN=56;BaseQRankSum=-3.463;DP=545;FS=11.235;HRun=11;HaplotypeScore=64.3189;InbreedingCoeff=0.3451;MQ=68.15;MQ0=2;MQRankSum=-1.853;QD=7.27;ReadPosRankSum=-0.594;VQSLOD=0.7810;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,2:19:37.26:216,37,0	0/1:5,1:8:8.43:8,0,106	0/0:15,0:13:27.28:0,27,169	0/1:17,0:16:5.62:6,0,104	0/0:23,0:23:26.38:0,26,386	0/0:17,0:18:34.79:0,35,339	0/1:14,1:15:7.58:8,0,214	0/0:29,2:33:48.25:0,48,532	0/0:15,0:15:41.07:0,41,309	0/0:32,0:32:50.24:0,50,573	0/1:14,2:17:1.55:2,0,163	1/1:3,11:14:30.06:304,30,0	1/1:2,16:18:21.85:403,22,0	0/1:10,1:11:6.55:7,0,139	0/0:13,0:15:31.88:0,32,236	0/0:23,0:23:59.74:0,60,464	0/0:22,1:25:30.40:0,30,399	0/0:19,0:19:38.77:0,39,302	0/0:25,0:25:47.94:0,48,432	0/0:22,0:23:64.79:0,65,493	0/1:13,0:13:0.45:0,0,175	0/1:7,9:17:13.58:225,0,14	1/1:4,22:26:54.11:547,54,0	1/1:2,6:11:29.55:250,30,0	0/0:22,1:23:23.26:0,23,359	0/1:21,2:24:5.07:5,0,319	0/1:19,2:21:7.07:7,0,317	0/1:19,3:23:46.57:47,0,228
chr10	72090201	.	T	TC	205.45	PASS	AB=0.977;AC=8;AF=0.143;AN=56;BaseQRankSum=6.433;DP=468;FS=0.883;HRun=0;HaplotypeScore=55.9660;InbreedingCoeff=0.3194;MQ=63.19;MQ0=3;MQRankSum=-2.946;QD=4.78;ReadPosRankSum=-3.100;VQSLOD=2.6897;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:8.93:67,9,0	0/0:11,0:11:33.11:0,33,457	0/0:17,0:12:22.33:0,22,325	0/0:12,0:10:24.42:0,24,268	0/0:21,0:21:63.02:0,63,728	0/0:16,0:16:42.10:0,42,564	0/0:32,0:32:96.29:0,96,1278	0/0:16,0:15:45.10:0,45,525	0/0:17,0:17:51.15:0,51,676	0/0:21,0:21:63.18:0,63,828	0/0:10,0:10:30:0,30,374	0/1:4,0:4:29.15:48,0,29	0/1:9,1:8:21.94:22,0,164	0/0:18,0:18:54.12:0,54,699	0/0:23,0:23:66.18:0,66,886	0/0:20,0:20:57.18:0,57,780	0/0:30,0:30:87.15:0,87,1148	0/0:26,0:26:77.58:0,78,1014	0/0:21,0:20:60.07:0,60,737	0/0:13,0:13:39.02:0,39,471	0/0:22,0:22:63.11:0,63,837	0/1:8,0:8:61.15:82,0,61	0/1:10,0:9:82.79:83,0,90	1/1:1,4:5:3.01:39,3,0	0/0:16,0:16:48.12:0,48,634	0/0:27,0:27:78.18:0,78,979	0/0:18,0:18:54.10:0,54,680	0/0:18,0:18:51.15:0,51,678
chr10	72090408	.	C	CGAG	4171.96	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-7.188;DP=504;FS=7.705;HRun=0;HaplotypeScore=74.7563;InbreedingCoeff=0.9604;MQ=90.14;MQ0=0;MQRankSum=-4.686;QD=52.81;ReadPosRankSum=3.421;VQSLOD=5.8328;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:21:51.05:1153,51,0	0/0:4,0:4:6.02:0,6,100	0/0:26,0:26:72.07:0,72,1090	0/0:26,0:26:78.26:0,78,1254	0/0:17,0:17:42.14:0,42,697	0/0:18,0:18:48.16:0,48,798	0/0:15,0:15:39.09:0,39,618	0/0:27,0:27:66.21:0,66,1049	0/0:15,0:15:36.08:0,36,568	0/0:11,0:11:27.09:0,27,440	0/0:4,0:4:12.04:0,12,199	1/1:1,4:5:12.04:271,12,0	1/1:1,15:16:36.12:812,36,0	0/0:21,0:21:54.18:0,54,897	0/0:24,0:24:57.19:0,57,947	0/0:9,0:9:27.08:0,27,424	0/0:45,0:45:99:0,99,1645	0/0:23,0:23:66.18:0,66,1058	0/0:23,0:23:66.20:0,66,1048	0/0:11,0:11:27.09:0,27,448	0/0:50,0:50:99:0,147,2414	1/1:0,5:5:15.05:338,15,0	1/1:0,6:7:20.99:378,21,0	1/1:2,22:25:54.19:1221,54,0	0/0:15,0:15:42.14:0,42,686	0/0:20,0:20:45.15:0,45,749	0/0:15,0:15:45.14:0,45,722	0/0:6,0:6:18.06:0,18,299
chr10	72090507	.	C	CCTTCTGCCTTTCTCCAGCTCCTTCCC	1682.94	PASS	AB=0.667;AC=16;AF=0.889;AN=18;BaseQRankSum=-2.739;DP=40;FS=6.419;HRun=0;HaplotypeScore=55.7321;MQ=131.21;MQ0=0;MQRankSum=-1.174;QD=73.17;ReadPosRankSum=-0.503;VQSLOD=1.5668;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,0:1:3.01:41,3,0	0/1:2,0:4:31.11:584,0,31	0/1:3,1:6:26.46:645,0,26	1/1:2,0:2:0.47:1,0,0	./.	1/1:2,0:2:6.02:109,6,0	1/1:2,0:2:6.01:83,6,0	1/1:2,0:2:3.01:57,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:2,0:2:6.02:112,6,0	./.	./.	./.	./.	./.	./.	1/1:2,0:2:6.02:134,6,0
chr10	72100469	.	T	TG	1587.69	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=6.581;DP=562;FS=0.392;HRun=2;HaplotypeScore=65.2647;InbreedingCoeff=0.9844;MQ=70.84;MQ0=0;MQRankSum=1.153;QD=9.51;ReadPosRankSum=0.523;VQSLOD=1.2209;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:37,1:38:44.14:306,44,0	0/0:4,0:4:12:0,12,130	0/0:19,0:9:17.76:0,18,175	0/0:22,0:20:12.96:0,13,326	0/0:26,0:26:61.22:0,61,611	0/0:17,0:17:35.12:0,35,356	0/0:24,0:24:64.79:0,65,685	0/0:34,0:34:78.29:0,78,811	0/0:20,0:20:56.91:0,57,585	1/1:3,12:15:34.98:327,35,0	1/1:9,2:12:28.14:304,28,0	0/0:16,0:16:24.37:0,24,309	1/1:16,0:16:17.28:100,17,0	0/0:18,0:18:40.37:0,40,479	0/0:22,0:22:62.67:0,63,679	0/0:16,0:16:32.85:0,33,321	0/0:42,0:42:99:0,107,1115	0/0:22,0:22:51.09:0,51,569	0/0:22,0:22:61.36:0,61,584	0/0:12,0:12:36.07:0,36,399	0/0:14,0:14:39.02:0,39,380	0/0:11,0:11:27.03:0,27,282	1/1:19,0:19:19.35:150,19,0	1/1:25,0:25:36.89:201,37,0	0/0:16,0:16:45.01:0,45,462	1/1:30,0:29:38.17:291,38,0	0/0:18,0:18:53.55:0,54,505	1/1:12,0:12:17.94:115,18,0
chr10	72102271	.	GA	G	3435.84	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.357;DP=539;FS=8.671;HRun=7;HaplotypeScore=58.2315;InbreedingCoeff=0.9625;MQ=81.50;MQ0=0;MQRankSum=-0.476;QD=25.64;ReadPosRankSum=1.852;VQSLOD=4.0716;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,37:39:99:1069,105,0	0/0:1,0:1:3.01:0,3,38	0/0:25,0:25:50.34:0,50,620	0/0:8,0:7:16.75:0,17,159	0/0:25,0:25:69.21:0,69,850	0/0:23,0:23:60.19:0,60,751	0/0:20,0:20:51.16:0,51,630	0/0:19,0:19:54.12:0,54,650	0/0:16,0:16:48.14:0,48,591	0/0:18,0:18:48.15:0,48,596	0/0:22,0:22:63.19:0,63,776	0/0:14,0:14:42.13:0,42,527	1/1:2,15:17:42.09:426,42,0	0/0:17,0:17:48.15:0,48,603	0/0:17,0:17:48.14:0,48,591	0/0:14,0:14:33.09:0,33,402	0/0:38,0:38:99:0,102,1283	0/0:16,0:16:48.09:0,48,572	0/0:13,0:13:39.12:0,39,491	0/0:23,0:23:66.17:0,66,812	0/0:21,0:21:63.19:0,63,777	0/0:12,0:12:33.11:0,33,415	1/1:3,20:23:51.11:520,51,0	1/1:0,17:17:45.10:459,45,0	0/0:24,0:24:69.21:0,69,857	1/1:5,19:24:22.36:534,22,0	0/0:19,0:19:51.15:0,51,617	1/1:0,14:14:42.10:428,42,0
chr10	72103692	.	T	TCC	2353.27	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.217;DP=534;FS=2.459;HRun=8;HaplotypeScore=72.6438;InbreedingCoeff=0.9757;MQ=72.07;MQ0=1;MQRankSum=-2.763;QD=21.01;ReadPosRankSum=1.242;VQSLOD=2.3941;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,12:18:15.05:238,15,0	0/0:11,0:11:30.05:0,30,323	0/0:16,0:16:12.47:0,12,323	0/0:12,0:10:24.05:0,24,254	0/0:32,0:32:93.17:0,93,1011	0/0:25,0:25:57.10:0,57,621	0/0:8,0:8:21.03:0,21,224	0/0:32,0:33:81.07:0,81,869	0/0:25,0:25:69.15:0,69,749	0/0:23,0:23:60.16:0,60,668	0/0:13,0:13:35.90:0,36,388	0/0:14,0:14:36.07:0,36,392	1/1:4,11:16:27.09:427,27,0	0/0:15,0:15:36.97:0,37,400	0/0:20,0:20:48.11:0,48,535	0/0:21,0:21:48.10:0,48,527	0/0:21,0:21:57.13:0,57,635	1/1:5,17:22:36.12:571,36,0	0/0:23,0:22:48.09:0,48,533	0/0:14,0:14:36.02:0,36,378	0/0:9,0:9:24.06:0,24,267	0/0:28,0:28:75.19:0,75,836	1/1:3,16:19:18.48:258,18,0	1/1:3,6:10:11.92:190,12,0	0/0:34,0:34:90.23:0,90,1002	1/1:5,17:22:17.71:672,18,0	0/0:25,0:25:69.16:0,69,769	1/1:1,4:5:12.04:190,12,0
chr10	72104184	.	A	AT	7133.13	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=18.565;DP=680;FS=2.276;HRun=0;HaplotypeScore=120.1647;InbreedingCoeff=0.9995;MQ=71.75;MQ0=0;MQRankSum=-16.766;QD=39.85;ReadPosRankSum=0.539;VQSLOD=4.4402;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:69.23:978,69,0	0/0:8,0:8:24.08:0,24,335	0/0:26,0:26:75.25:0,75,1032	0/0:17,0:17:45.14:0,45,595	0/0:30,0:30:87.29:0,87,1216	0/0:13,0:13:39.13:0,39,545	0/0:21,0:21:60.19:0,60,824	0/0:27,0:27:78.24:0,78,1061	0/0:30,0:30:87.29:0,87,1216	1/1:0,18:18:54.18:766,54,0	1/1:0,18:18:54.18:775,54,0	0/0:31,0:31:90.30:0,90,1255	1/1:0,27:27:78.26:1105,78,0	0/0:38,0:38:99:0,114,1593	0/0:32,0:32:90.27:0,90,1211	0/0:34,0:34:99:0,102,1427	0/0:31,0:31:93.30:0,93,1285	1/1:1,12:13:39.13:550,39,0	0/0:13,0:13:39.12:0,39,529	0/0:28,0:28:84.28:0,84,1175	0/0:48,0:48:99:0,144,1994	0/0:17,0:17:51.17:0,51,713	1/1:1,16:17:51.16:713,51,0	1/1:0,16:16:33.11:471,33,0	0/0:23,0:23:66.22:0,66,921	1/1:0,32:32:96.32:1364,96,0	0/0:34,0:33:99:0,102,1421	1/1:1,9:10:30.08:411,30,0
chr10	72104214	.	T	TGACTTCCACAGCTGTCCC	27717.86	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.817;DP=773;FS=4.542;HRun=0;HaplotypeScore=389.6356;InbreedingCoeff=0.9983;MQ=61.93;MQ0=1;MQRankSum=-17.686;QD=127.73;ReadPosRankSum=-3.169;VQSLOD=3.0830;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,8:33:67.47:3284,67,0	0/0:9,0:9:27.09:0,27,1143	0/0:34,0:32:66.07:0,66,1635	0/0:29,0:25:53.55:0,54,2058	0/0:25,0:25:66.23:0,66,3022	0/0:17,0:17:48.16:0,48,2087	0/0:28,0:28:81.28:0,81,3414	0/0:33,0:33:78.26:0,78,3318	0/0:34,0:34:84.27:0,84,3837	1/1:19,8:27:72.17:4363,72,0	1/1:17,6:23:36.03:1603,36,0	0/0:32,0:32:81.26:0,81,3767	1/1:18,9:27:72.20:4499,72,0	0/0:40,0:40:99:0,105,4584	0/0:38,0:38:99:0,111,5105	0/0:31,0:31:84.29:0,84,3975	0/0:39,0:39:99:0,117,5196	1/1:15,2:17:42.14:2984,42,0	0/0:15,0:15:39.13:0,39,1546	0/0:23,0:23:66.21:0,66,2790	0/0:59,0:59:99:0,169,7722	0/0:14,0:14:36.11:0,36,1552	1/1:15,5:20:33.11:1536,33,0	1/1:19,5:24:26.62:1497,27,0	0/0:22,0:22:54.19:0,54,2497	1/1:23,12:35:90.31:6489,90,0	0/0:34,0:33:81.26:0,81,3768	1/1:7,3:10:18.06:1464,18,0
chr10	72104315	.	T	TAC	5725.73	PASS	AB=0.703;AC=13;AF=0.232;AN=56;BaseQRankSum=-11.491;DP=715;FS=13.875;HRun=0;HaplotypeScore=94.6401;InbreedingCoeff=0.7201;MQ=64.89;MQ0=4;MQRankSum=-2.026;QD=26.39;ReadPosRankSum=2.536;VQSLOD=5.2062;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,16:32:49.39:785,49,0	0/0:13,0:13:30.05:0,30,348	0/1:26,0:18:8.83:9,0,251	0/0:36,0:29:44.60:0,45,490	0/0:19,0:19:54.14:0,54,642	0/0:18,0:18:48.14:0,48,591	0/0:20,0:20:51.16:0,51,642	0/0:38,0:38:81.24:0,81,989	0/0:22,0:22:60.18:0,60,742	0/0:21,0:21:57.16:0,57,695	0/0:18,0:18:42.12:0,42,515	0/0:25,0:25:66.16:0,66,789	1/1:5,23:27:51.17:844,51,0	0/0:25,0:25:60.19:0,60,756	0/0:27,0:27:69.22:0,69,870	0/0:32,0:32:90.27:0,90,1119	0/0:21,0:21:54.11:0,54,666	1/1:4,20:24:45.15:747,45,0	0/0:24,0:23:26.04:0,26,511	0/0:27,0:27:69.21:0,69,857	0/0:51,0:51:99:0,120,1485	0/0:16,0:16:42.13:0,42,530	0/1:6,21:28:9.84:907,0,10	1/1:2,18:20:30.04:498,30,0	0/0:24,0:24:60.05:0,60,717	1/1:7,30:37:52.33:1241,52,0	0/0:20,0:20:57.18:0,57,719	0/1:4,18:22:24.41:696,0,24
chr10	72104531	.	TAC	T	2397.65	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=13.057;DP=414;FS=0.000;HRun=0;HaplotypeScore=59.0837;InbreedingCoeff=0.8254;MQ=64.95;MQ0=2;MQRankSum=-0.097;QD=16.54;ReadPosRankSum=3.166;VQSLOD=2.9515;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:26.84:196,27,0	0/0:10,0:10:30.07:0,30,435	0/0:8,0:6:5.81:0,6,57	0/0:8,0:5:9.01:0,9,103	0/0:18,0:18:45.12:0,45,722	0/0:23,0:23:63.13:0,63,950	0/0:3,0:3:6.02:0,6,104	0/0:27,0:27:75.19:0,75,1097	0/0:11,0:11:33.10:0,33,543	1/1:2,19:21:60.12:727,60,0	1/1:1,18:19:39.13:518,39,0	0/0:12,0:12:36.11:0,36,590	1/1:18,0:18:32.71:241,33,0	0/0:5,0:5:12.02:0,12,178	0/0:16,0:16:48.11:0,48,721	0/0:16,0:16:48.15:0,48,798	0/0:20,0:20:54.12:0,54,848	0/1:15,0:15:11.21:108,0,11	0/0:16,0:16:33.08:0,33,489	0/0:23,0:23:55:0,55,823	0/0:3,0:3:9.03:0,9,156	0/0:3,0:3:9.02:0,9,129	1/1:5,0:5:5.97:44,6,0	./.	0/0:18,0:18:54.16:0,54,877	1/1:34,0:32:77.54:579,78,0	0/0:27,0:26:69.21:0,69,1127	1/1:12,0:12:23.86:175,24,0
chr10	72104537	.	CACAT	C	2945.97	PASS	AB=0.955;AC=11;AF=0.204;AN=54;BaseQRankSum=7.241;DP=418;FS=0.520;HRun=0;HaplotypeScore=72.7417;InbreedingCoeff=0.7957;MQ=65.16;MQ0=2;MQRankSum=0.226;QD=26.30;ReadPosRankSum=2.649;VQSLOD=3.1093;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:20:27.09:536,27,0	0/0:10,0:10:30.08:0,30,693	0/0:6,0:4:5.81:0,6,81	0/0:8,0:5:9.01:0,9,165	0/0:16,0:16:48.13:0,48,1204	0/0:23,0:23:63.19:0,63,1597	0/0:3,0:3:9.03:0,9,239	0/0:32,0:32:96.23:0,96,1938	0/0:11,0:11:33.10:0,33,862	0/1:20,1:21:77.42:77,0,144	0/0:20,0:20:36.83:0,37,155	0/0:14,0:14:42.10:0,42,995	1/1:0,19:19:33.01:657,33,0	0/0:5,0:5:15.01:0,15,296	0/0:17,0:17:51.12:0,51,1175	0/0:16,0:16:48.15:0,48,1281	0/0:22,0:22:60.15:0,60,1471	0/0:14,0:14:31.52:0,32,170	0/0:13,0:13:36.11:0,36,860	0/0:23,0:23:69:0,69,1515	0/0:3,0:3:9.03:0,9,251	0/0:4,0:4:12.03:0,12,239	1/1:0,4:4:6.02:119,6,0	./.	0/0:20,0:20:60.16:0,60,1463	1/1:3,30:31:58.12:1249,58,0	0/0:25,0:24:72.23:0,72,1859	1/1:0,14:14:24.08:478,24,0
chr10	72104539	.	CAT	C	1584.09	PASS	AB=1.000;AC=17;AF=0.315;AN=54;BaseQRankSum=13.276;DP=416;FS=2.096;HRun=0;HaplotypeScore=62.2531;InbreedingCoeff=0.8782;MQ=65.24;MQ0=2;MQRankSum=-1.167;QD=10.49;ReadPosRankSum=3.436;VQSLOD=3.1336;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:26.69:178,27,0	0/0:10,0:10:23.29:0,23,356	0/1:7,0:5:0.82:1,0,26	0/0:7,0:4:5.91:0,6,80	0/0:16,0:16:45.14:0,45,717	0/0:23,0:23:57.19:0,57,934	0/0:3,0:3:9.03:0,9,146	0/0:32,0:32:78.20:0,78,1111	0/0:11,0:11:30.10:0,30,494	1/1:21,0:21:23.46:234,23,0	1/1:20,0:20:15.62:183,16,0	0/0:14,0:14:39.11:0,39,585	1/1:19,0:19:32.53:218,33,0	0/0:5,0:5:12.02:0,12,172	0/0:17,0:17:39.13:0,39,644	0/0:16,0:16:45.15:0,45,744	0/0:22,0:22:54.17:0,54,864	1/1:2,12:14:27.09:340,27,0	0/0:14,0:14:36.10:0,36,533	0/0:22,1:23:16.32:0,16,785	0/0:3,0:3:9.03:0,9,150	0/0:4,0:4:9.02:0,9,125	1/1:4,0:4:5.93:40,6,0	./.	0/0:20,0:20:54.16:0,54,848	1/1:31,0:29:58.11:428,58,0	0/0:24,0:24:69.20:0,69,1084	1/1:14,0:14:23.74:159,24,0
chr10	72105355	.	T	TA	8131.69	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=3.450;DP=797;FS=0.992;HRun=0;HaplotypeScore=85.7590;InbreedingCoeff=0.9981;MQ=84.41;MQ0=0;MQRankSum=-6.052;QD=41.28;ReadPosRankSum=3.607;VQSLOD=5.4700;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,57:60:99:2300,144,0	0/0:6,0:6:18.06:0,18,251	0/0:28,0:28:74.88:0,75,1037	0/0:31,0:31:74.33:0,74,1001	0/0:27,0:27:81.24:0,81,1109	0/0:22,0:22:66.21:0,66,905	0/0:25,0:25:72.21:0,72,970	0/0:27,0:27:75.21:0,75,985	0/0:35,0:35:99:0,99,1345	0/0:26,0:26:78.26:0,78,1088	0/0:14,0:14:39.13:0,39,545	0/0:33,0:33:93.27:0,93,1261	1/1:0,26:26:75.26:1198,75,0	0/0:37,0:37:99:0,108,1481	0/0:45,0:45:99:0,132,1811	0/0:32,0:32:90.25:0,90,1189	0/0:38,0:38:99:0,111,1550	1/1:0,15:15:42.14:671,42,0	0/0:22,0:22:66.20:0,66,890	0/0:33,0:33:96.28:0,96,1304	0/0:44,0:44:99:0,132,1791	0/0:32,0:32:96.30:0,96,1309	1/1:1,19:20:51.17:814,51,0	1/1:1,24:25:65.16:1066,65,0	0/0:22,0:22:63.19:0,63,848	1/1:4,38:42:75.38:1700,75,0	0/0:21,0:21:60.14:0,60,781	1/1:0,9:9:24.08:383,24,0
chr10	72106072	.	TAAG	T	3147.30	PASS	AB=0.764;AC=11;AF=0.196;AN=56;BaseQRankSum=12.178;DP=470;FS=1.594;HRun=0;HaplotypeScore=75.1178;InbreedingCoeff=0.6494;MQ=58.07;MQ0=3;MQRankSum=-1.666;QD=31.79;ReadPosRankSum=2.462;VQSLOD=4.1296;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:25:63.22:1109,63,0	0/0:6,0:6:18.06:0,18,426	0/0:14,0:10:30.07:0,30,647	0/0:20,0:14:33.11:0,33,689	0/0:19,0:19:51.15:0,51,1116	0/0:19,0:19:54.19:0,54,1248	0/0:10,0:10:30.10:0,30,710	0/0:51,0:50:99:0,144,3335	0/0:19,0:19:57.20:0,57,1344	0/0:23,0:23:69.23:0,69,1545	0/0:10,0:10:30.09:0,30,666	0/0:13,0:13:39.13:0,39,879	1/1:0,15:15:33.58:582,34,0	0/0:11,0:11:33.11:0,33,777	0/0:14,0:14:42.13:0,42,947	0/0:10,0:10:30.10:0,30,710	0/0:27,0:27:78.25:0,78,1771	0/1:12,0:12:32.81:33,0,161	0/0:19,0:19:57.18:0,57,1304	0/0:21,0:21:46.71:0,47,1246	0/0:27,0:27:81.22:0,81,1797	0/0:4,0:4:12.04:0,12,284	1/1:0,7:7:15.05:265,15,0	1/1:0,18:18:41.81:741,42,0	0/0:18,0:18:54.19:0,54,1275	0/1:6,7:13:46.91:346,0,47	0/0:16,0:16:48.16:0,48,1135	0/1:4,5:9:99:244,0,120
chr10	72106073	.	AAGAGCATTGACTACTCTACC	A	659.87	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.476;DP=458;FS=0.000;HRun=0;HaplotypeScore=242.2044;InbreedingCoeff=0.9239;MQ=56.99;MQ0=3;MQRankSum=-3.483;QD=59.99;ReadPosRankSum=0.564;VQSLOD=2.5729;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:62.47:0,62,3059	0/0:6,0:6:18.06:0,18,1727	0/0:14,0:10:27.09:0,27,1503	0/0:19,0:14:33.11:0,33,2408	0/0:17,0:17:45.15:0,45,3623	0/0:19,0:19:54.19:0,54,4560	0/0:10,0:10:30.10:0,30,2712	0/0:51,0:50:99:0,138,11266	0/0:19,0:19:51.17:0,51,3763	0/0:23,0:23:60.21:0,60,4390	0/0:11,0:11:30.10:0,30,2666	0/0:13,0:13:36.12:0,36,2743	0/0:15,0:15:32.70:0,33,1793	0/0:11,0:11:33.11:0,33,2934	0/0:14,0:14:39.12:0,39,2605	0/0:10,0:10:30.08:0,30,2556	0/0:26,0:26:72.25:0,72,6313	1/1:6,5:11:15.05:748,15,0	0/0:19,0:19:54.19:0,54,4913	0/0:20,0:20:51.18:0,51,4128	0/0:27,0:27:72.23:0,72,5873	0/0:4,0:4:12.04:0,12,1086	0/0:7,0:7:15.05:0,15,897	0/0:18,0:18:41.93:0,42,2379	0/0:18,0:18:51.17:0,51,4774	0/0:8,0:8:24.08:0,24,1306	0/0:16,0:16:48.16:0,48,4274	0/0:7,0:7:21.07:0,21,1135
chr10	72107088	.	C	CTT	1555.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.538;DP=760;FS=4.529;HRun=3;HaplotypeScore=85.4255;InbreedingCoeff=0.9999;MQ=86.82;MQ0=0;MQRankSum=-3.799;QD=42.03;ReadPosRankSum=1.728;VQSLOD=3.1694;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.28:0,87,1198	0/0:13,0:13:39.13:0,39,546	0/0:23,0:23:60.06:0,60,789	0/0:27,0:27:72.16:0,72,948	0/0:25,0:25:69.22:0,69,948	0/0:17,0:17:51.16:0,51,696	0/0:33,0:33:96.29:0,96,1309	0/0:21,0:21:54.18:0,54,754	0/0:25,0:25:72.24:0,72,1004	0/0:37,0:37:99:0,111,1524	0/0:19,0:19:57.17:0,57,777	0/0:31,0:31:90.29:0,90,1239	0/0:27,0:27:69.21:0,69,945	0/0:23,0:23:66.22:0,66,920	0/0:32,0:32:93.28:0,93,1278	0/0:31,0:31:87.28:0,87,1199	0/0:26,0:26:72.24:0,72,1005	1/1:1,35:37:90.31:1650,90,0	0/0:23,0:23:69.20:0,69,915	0/0:32,0:32:93.28:0,93,1267	0/0:29,0:29:81.27:0,81,1131	0/0:30,0:30:90.29:0,90,1240	0/0:20,0:20:60.17:0,60,804	0/0:38,0:38:99:0,108,1485	0/0:31,0:30:87.29:0,87,1215	0/0:33,0:33:93.30:0,93,1287	0/0:28,0:28:84.26:0,84,1157	0/0:18,0:18:54.18:0,54,755
chr10	72110181	.	TA	T	2016.56	PASS	AB=0.855;AC=17;AF=0.304;AN=56;BaseQRankSum=8.045;DP=661;FS=19.378;HRun=12;HaplotypeScore=74.8117;InbreedingCoeff=0.7476;MQ=71.55;MQ0=0;MQRankSum=0.323;QD=10.24;ReadPosRankSum=4.197;VQSLOD=1.1899;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:54:71.75:0,72,411	1/1:2,3:5:8.94:70,9,0	0/1:7,2:9:17.97:35,0,18	0/0:12,0:12:10.21:0,10,69	0/0:28,1:29:46.66:0,47,592	0/0:19,0:19:36.02:0,36,350	0/0:23,0:23:60.04:0,60,582	0/0:22,1:23:18.71:0,19,330	0/0:23,1:24:27.83:0,28,443	1/1:12,22:35:67.69:512,68,0	1/1:8,8:18:30.90:221,31,0	0/0:15,0:17:38.85:0,39,350	1/1:2,21:23:50.78:395,51,0	0/0:24,0:27:50.91:0,51,489	0/0:31,0:31:84.12:0,84,826	0/0:28,0:28:66.12:0,66,665	0/0:30,2:32:37.68:0,38,738	1/1:6,13:19:25.85:246,26,0	0/0:24,1:26:33.59:0,34,468	0/0:28,2:30:27.68:0,28,417	0/0:9,0:9:18.02:0,18,172	0/1:20,2:22:5.87:6,0,273	1/1:5,19:24:50.03:393,50,0	1/1:4,15:19:41.80:325,42,0	0/1:19,3:22:12.56:13,0,401	0/0:25,1:27:27.76:0,28,415	0/0:35,0:35:84.13:0,84,830	0/0:18,0:18:42.06:0,42,415
chr10	72110290	.	ATTT	A	315.86	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=10.815;DP=695;FS=6.208;HRun=3;HaplotypeScore=124.9353;InbreedingCoeff=0.7407;MQ=82.42;MQ0=0;MQRankSum=-9.348;QD=4.65;ReadPosRankSum=2.549;VQSLOD=-0.1791;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.29:0,84,2070	0/0:6,0:6:18.06:0,18,443	0/0:26,0:26:75.26:0,75,1783	0/0:16,0:14:42.14:0,42,971	0/0:30,0:30:90.29:0,90,2162	0/0:22,0:22:66.21:0,66,1555	0/0:36,0:36:99:0,108,2619	0/0:26,0:26:78.27:0,78,1869	0/0:23,0:23:69.24:0,69,1701	1/1:33,8:41:12.14:356,12,0	0/1:27,0:27:4.04:60,0,4	0/0:20,0:20:60.21:0,60,1467	0/0:18,0:18:54.19:0,54,1302	0/0:29,0:29:87.28:0,87,2072	0/0:33,0:33:99:0,99,2416	0/0:26,0:26:78.27:0,78,1898	0/0:33,0:33:99:0,99,2413	0/0:14,0:14:42.14:0,42,1004	0/0:27,0:27:81.26:0,81,1884	0/0:32,0:32:96.31:0,96,2312	0/0:25,0:25:75.22:0,75,1722	0/0:18,0:18:54.19:0,54,1331	0/0:25,0:26:78.26:0,78,1879	0/0:25,0:25:75.26:0,75,1845	0/0:24,0:24:72.21:0,72,1657	0/0:27,0:27:75.08:0,75,1802	0/0:28,0:28:81.28:0,81,1992	0/0:9,0:9:27.08:0,27,617
chr10	72110293	.	T	TAAAAA	5111.22	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=12.399;DP=702;FS=1.559;HRun=0;HaplotypeScore=141.4868;InbreedingCoeff=0.9948;MQ=81.61;MQ0=0;MQRankSum=-10.934;QD=68.15;ReadPosRankSum=1.140;VQSLOD=5.6748;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.29:0,84,1823	0/0:6,0:6:18.06:0,18,394	0/0:26,0:26:75.26:0,75,1634	0/0:15,0:13:39.10:0,39,746	0/0:30,0:30:90.28:0,90,1869	0/0:21,0:21:63.22:0,63,1430	0/0:37,0:37:99:0,108,2314	0/0:24,0:24:72.25:0,72,1627	0/0:23,0:23:69.24:0,69,1566	1/1:11,34:46:99:3316,129,0	1/1:3,25:29:66.18:1795,66,0	0/0:21,0:21:60.21:0,60,1336	0/0:17,0:17:51.17:0,51,1113	0/0:29,0:29:84.29:0,84,1889	0/0:33,0:33:99:0,99,2183	0/0:30,0:30:84.29:0,84,1800	0/0:34,0:34:99:0,102,2186	0/0:14,0:14:39.13:0,39,864	0/0:25,0:25:75.26:0,75,1707	0/0:34,0:34:96.33:0,96,2079	0/0:22,0:22:66.23:0,66,1495	0/0:20,0:20:60.21:0,60,1265	0/0:26,0:26:58.58:0,59,1664	0/0:26,0:26:75.24:0,75,1678	0/0:22,0:22:66.23:0,66,1439	0/0:25,0:25:72.25:0,72,1623	0/0:30,0:30:87.27:0,87,1787	0/0:8,0:8:24.08:0,24,551
chr10	72111580	.	T	TA	312.28	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.674;DP=293;FS=2.138;HRun=2;HaplotypeScore=32.0043;InbreedingCoeff=0.7510;MQ=56.24;MQ0=6;MQRankSum=1.007;QD=10.41;ReadPosRankSum=1.150;VQSLOD=1.6545;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,11:13:21.05:242,21,0	0/0:6,0:5:14.98:0,15,164	0/0:3,0:1:2.84:0,3,14	0/0:9,0:5:6.44:0,6,81	0/0:11,0:11:26.91:0,27,267	0/0:14,0:14:27.07:0,27,316	0/0:9,0:8:8.89:0,9,72	0/0:28,0:26:60.92:0,61,602	0/0:4,0:4:8.95:0,9,80	0/0:13,0:12:36.08:0,36,411	0/0:2,0:2:3.01:0,3,37	0/0:5,0:5:15:0,15,166	1/1:7,0:7:14.16:79,14,0	0/0:6,0:6:15.03:0,15,170	0/0:6,0:6:18.04:0,18,201	0/0:4,0:4:9.01:0,9,89	0/0:33,0:31:87.02:0,87,942	0/0:24,0:22:62.52:0,63,644	0/0:13,0:13:36.33:0,36,330	0/0:3,0:3:8.94:0,9,91	0/0:9,0:8:11.93:0,12,105	0/0:5,0:5:14.97:0,15,151	1/1:8,0:8:17.77:116,18,0	1/1:1,0:1:2.97:20,3,0	0/0:17,0:17:45.08:0,45,503	0/0:9,0:9:23.99:0,24,243	0/0:15,0:15:38.90:0,39,420	0/0:15,0:14:42.10:0,42,479
chr10	72111737	.	CCCCCTAGGTAGACATTTCTTTTGTTTG	C	2566.86	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.286;DP=448;FS=23.308;HRun=0;HaplotypeScore=267.6573;InbreedingCoeff=0.9280;MQ=61.56;MQ0=18;MQRankSum=-4.163;QD=122.23;ReadPosRankSum=2.885;VQSLOD=1.9612;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:81.19:0,81,7422	0/0:5,0:5:15.04:0,15,1265	0/0:21,0:13:39.13:0,39,2988	0/0:24,0:15:45.15:0,45,2932	0/0:14,0:14:42.14:0,42,4497	0/0:20,0:20:60.20:0,60,5786	0/0:18,0:14:36.12:0,36,4002	0/0:32,0:32:96.29:0,96,7628	0/0:9,0:9:24.08:0,24,2428	1/1:3,12:15:36.07:2239,36,0	1/1:4,2:5:6.02:439,6,0	0/0:7,0:7:21.07:0,21,1940	0/0:11,0:10:27.09:0,27,3027	0/0:11,0:11:30.08:0,30,3212	0/0:17,0:15:42.14:0,42,4587	0/0:9,0:9:24.08:0,24,2845	0/0:26,0:26:75.26:0,75,8067	0/0:31,0:31:77.92:0,78,7865	0/0:21,0:21:63.22:0,63,6126	0/0:13,0:13:39.13:0,39,4696	0/0:19,0:18:48.16:0,48,5571	0/0:10,0:10:30.09:0,30,3392	0/0:8,0:8:24.08:0,24,2685	0/0:13,0:11:27.08:0,27,2240	0/0:23,0:22:63.22:0,63,7017	0/0:11,0:10:30.10:0,30,3679	0/0:13,0:13:36.12:0,36,3718	0/0:11,0:11:30.10:0,30,3750
chr10	72112625	.	C	CA	3105.07	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.222;DP=711;FS=13.188;HRun=1;HaplotypeScore=74.3281;InbreedingCoeff=0.9999;MQ=85.79;MQ0=0;MQRankSum=-4.581;QD=34.12;ReadPosRankSum=2.715;VQSLOD=2.3646;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:54.18:781,54,0	0/0:15,0:15:45.13:0,45,570	0/0:25,0:25:72.17:0,72,873	0/0:20,0:20:54.15:0,54,664	0/0:24,0:24:72.23:0,72,934	0/0:35,0:35:96.29:0,96,1231	0/0:24,0:24:66.21:0,66,856	0/0:36,0:36:96.30:0,96,1233	0/0:28,0:28:75.23:0,75,959	0/0:36,0:36:99:0,105,1352	0/0:33,0:33:96.31:0,96,1245	0/0:20,0:20:60.19:0,60,777	1/1:1,24:25:66.22:963,66,0	0/0:26,0:26:78.25:0,78,1013	0/0:35,0:35:99:0,102,1309	0/0:24,0:24:72.22:0,72,920	0/0:15,0:15:42.14:0,42,545	0/0:15,0:15:42.14:0,42,543	0/0:14,0:14:36.12:0,36,468	0/0:27,0:27:78.25:0,78,1013	0/0:34,0:34:96.31:0,96,1246	0/0:23,0:23:69.22:0,69,895	1/1:0,18:18:48.16:697,48,0	1/1:0,23:22:57.19:825,57,0	0/0:22,0:22:66.20:0,66,840	0/0:37,0:37:99:0,108,1401	0/0:35,0:35:99:0,102,1265	0/0:17,0:17:48.16:0,48,623
chr10	72113540	.	CT	C	1991.96	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.830;DP=613;FS=3.221;HRun=1;HaplotypeScore=70.6384;InbreedingCoeff=0.9996;MQ=76.70;MQ0=0;MQRankSum=-3.870;QD=35.57;ReadPosRankSum=0.565;VQSLOD=3.7921;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.26:0,84,1268	0/0:9,0:9:27.09:0,27,422	0/0:21,0:21:61.59:0,62,833	0/0:18,0:18:51.17:0,51,792	0/0:22,0:22:66.21:0,66,1007	0/0:21,0:21:44.29:0,44,919	0/0:18,0:18:54.17:0,54,823	0/0:37,0:37:99:0,111,1694	0/0:20,0:20:60.16:0,60,866	0/0:33,0:33:93.22:0,93,1381	0/0:21,0:21:51.17:0,51,796	0/0:19,0:19:57.15:0,57,826	1/1:0,19:19:57.10:755,57,0	0/0:22,0:22:66.17:0,66,983	0/0:23,0:23:69.22:0,69,1057	0/0:27,0:27:81.25:0,81,1224	0/0:27,0:27:81.25:0,81,1241	0/0:20,0:20:57.19:0,57,890	0/0:18,0:18:54.16:0,54,786	0/0:16,0:16:48.16:0,48,750	0/0:33,0:33:99:0,99,1526	0/0:28,0:28:78.24:0,78,1176	1/1:2,16:18:45.14:609,45,0	1/1:1,18:19:57.14:770,57,0	0/0:18,0:18:54.16:0,54,801	0/0:23,0:23:69.21:0,69,1035	0/0:17,0:17:48.16:0,48,748	0/0:14,0:14:42.12:0,42,632
chr10	72113597	.	CCCTT	C	5702.55	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.949;DP=621;FS=2.282;HRun=0;HaplotypeScore=115.4259;InbreedingCoeff=0.9995;MQ=71.11;MQ0=0;MQRankSum=-5.189;QD=43.20;ReadPosRankSum=2.266;VQSLOD=4.9598;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,35:39:87.30:1600,87,0	0/0:10,0:10:30.10:0,30,760	0/0:24,0:24:66.22:0,66,1571	0/0:21,0:21:52.06:0,52,1142	0/0:24,0:24:66.21:0,66,1659	0/0:25,0:25:69.24:0,69,1761	0/0:16,0:16:48.14:0,48,1133	0/0:26,0:26:75.26:0,75,1933	0/0:25,0:25:75.26:0,75,1917	1/1:4,26:30:81.26:1452,81,0	1/1:1,17:18:45.15:789,45,0	0/0:23,0:23:63.22:0,63,1664	1/1:2,9:11:33.11:603,33,0	0/0:20,0:20:54.19:0,54,1390	0/0:19,0:19:57.20:0,57,1450	0/0:22,0:22:63.22:0,63,1657	0/0:27,0:27:78.27:0,78,2027	0/0:25,0:25:72.25:0,72,1841	0/0:25,0:25:72.24:0,72,1766	0/0:22,0:22:60.21:0,60,1561	0/0:32,0:32:87.30:0,87,2213	0/0:27,0:27:72.25:0,72,1858	1/1:0,16:16:42.14:741,42,0	1/1:2,16:18:29.89:516,30,0	0/0:16,0:16:45.15:0,45,1186	0/0:34,0:34:41.13:0,41,2293	0/0:17,0:17:51.17:0,51,1292	0/0:9,0:9:27.09:0,27,692
chr10	72115634	.	AC	A	1934.71	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.723;DP=663;FS=0.544;HRun=1;HaplotypeScore=66.9167;InbreedingCoeff=0.9984;MQ=87.08;MQ0=0;MQRankSum=-4.167;QD=33.36;ReadPosRankSum=3.120;VQSLOD=3.4641;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:39.13:0,39,621	0/0:17,0:17:51.17:0,51,815	0/0:30,0:30:84.18:0,84,1167	0/0:17,0:17:23.33:0,23,509	0/0:36,0:36:99:0,102,1605	0/0:30,0:30:87.30:0,87,1384	0/0:14,0:14:42.14:0,42,668	0/0:43,0:43:99:0,129,1998	0/0:16,0:16:48.16:0,48,765	0/0:26,0:26:78.26:0,78,1235	0/0:19,0:19:57.19:0,57,911	0/0:29,0:29:87.30:0,87,1386	1/1:0,27:27:72.21:986,72,0	0/0:15,0:15:45.15:0,45,716	0/0:19,0:19:57.18:0,57,885	0/0:32,0:32:96.33:0,96,1531	0/0:24,0:24:72.25:0,72,1147	0/0:18,0:18:54.18:0,54,852	0/0:17,0:17:51.17:0,51,816	0/0:29,0:29:84.27:0,84,1307	0/0:25,0:25:75.26:0,75,1193	0/0:28,0:28:81.26:0,81,1269	1/1:0,22:22:54.18:755,54,0	1/1:0,9:9:24.08:336,24,0	0/0:21,0:21:63.21:0,63,1007	0/0:25,0:25:75.26:0,75,1199	0/0:40,0:40:99:0,120,1893	0/0:19,0:19:51.17:0,51,811
chr10	72117228	.	A	AGT	1786.70	PASS	AB=0.835;AC=31;AF=0.596;AN=52;BaseQRankSum=-1.839;DP=599;FS=1.562;HRun=0;HaplotypeScore=102.5449;InbreedingCoeff=-0.0493;MQ=66.72;MQ0=16;MQRankSum=-0.187;QD=3.85;ReadPosRankSum=0.429;VQSLOD=2.7012;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:29:2.50:9,2,0	1/1:2,5:7:6.02:89,6,0	./.	./.	0/1:26,0:27:6.63:127,0,7	0/0:9,0:17:11.36:0,11,56	1/1:15,6:21:12:153,12,0	1/1:25,0:24:8.26:63,8,0	0/1:18,1:18:41.29:67,0,41	0/0:23,0:23:10.73:0,11,59	0/0:16,0:15:14.66:0,15,135	0/1:13,5:20:23.41:62,0,23	1/1:16,0:15:9.20:68,9,0	0/1:14,11:25:52.55:132,0,53	0/1:14,5:19:20.31:80,0,20	1/1:6,6:13:9.03:133,9,0	0/1:13,14:27:23.56:243,0,24	0/1:12,0:22:23.55:24,0,60	1/1:29,0:27:14.95:137,15,0	1/1:11,4:14:3.01:45,3,0	0/1:27,0:27:8.85:142,0,9	0/1:14,9:23:16.33:161,0,16	1/1:20,0:19:5.12:27,5,0	1/1:29,0:29:2.99:24,3,0	0/1:15,5:18:32.46:32,0,70	0/0:19,0:18:6.82:0,7,70	0/1:23,1:25:54.28:131,0,54	0/0:6,0:7:1.44:0,1,40
chr10	72117428	.	TTTTTCTCCTCCTC	T	230.53	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.658;DP=575;FS=4.203;HRun=0;HaplotypeScore=192.0600;InbreedingCoeff=0.9362;MQ=63.95;MQ0=7;MQRankSum=-3.408;QD=19.21;ReadPosRankSum=1.631;VQSLOD=2.3731;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.16:0,69,3165	0/0:10,0:10:30.09:0,30,1374	0/0:40,0:24:64.46:0,64,1886	0/0:44,0:23:40.58:0,41,1029	0/0:20,0:20:57.16:0,57,2700	0/0:23,0:23:63.20:0,63,2828	0/0:25,0:25:66.19:0,66,2454	0/0:31,0:30:72.20:0,72,2169	0/0:17,0:17:45.14:0,45,2056	0/0:17,0:17:45.14:0,45,2098	0/0:16,0:16:45.14:0,45,2458	0/0:13,0:13:36.12:0,36,1638	0/0:9,0:9:27.09:0,27,1121	0/0:17,0:17:45.14:0,45,1793	0/0:19,0:19:48.08:0,48,1889	0/0:15,0:15:42.12:0,42,1667	0/0:21,0:21:56.96:0,57,2399	1/1:2,10:11:9.03:314,9,0	0/0:16,0:15:39.12:0,39,1383	0/0:24,0:24:60.18:0,60,2390	0/0:22,0:22:63.18:0,63,2366	0/0:18,0:18:51.14:0,51,2149	0/0:12,0:12:30.10:0,30,1212	0/0:32,0:32:76.20:0,76,3921	0/0:17,0:17:45.15:0,45,2335	0/0:28,0:28:84.29:0,84,4149	0/0:21,0:21:63.19:0,63,2961	0/0:10,0:10:30.10:0,30,1719
chr10	72117755	.	CAAA	C	2211.50	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.374;DP=565;FS=2.576;HRun=15;HaplotypeScore=98.1775;InbreedingCoeff=0.9784;MQ=70.68;MQ0=3;MQRankSum=-6.747;QD=16.50;ReadPosRankSum=5.649;VQSLOD=2.8295;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:21:38.78:465,39,0	0/0:5,0:5:15.05:0,15,247	0/0:31,0:17:8.87:0,9,300	0/0:15,0:10:17.04:0,17,174	0/0:29,0:33:76.43:0,76,1197	0/0:15,0:17:48.12:0,48,739	0/0:14,0:16:42.10:0,42,704	0/0:19,0:20:30.08:0,30,488	0/0:20,0:20:51.11:0,51,854	1/1:6,19:25:53.98:605,54,0	1/1:5,18:24:37.35:434,37,0	0/0:12,0:14:19.29:0,19,264	1/1:8,0:24:44.01:265,44,0	0/0:17,0:17:45.14:0,45,781	0/0:24,0:30:84.21:0,84,1303	0/0:18,0:20:48.08:0,48,724	0/0:20,0:24:51.08:0,51,783	1/1:1,9:10:24.03:269,24,0	0/0:13,0:18:41.91:0,42,646	0/0:24,0:26:57.17:0,57,982	0/0:16,0:19:33.09:0,33,547	0/0:21,0:21:51.17:0,51,876	1/1:3,0:16:35.19:213,35,0	1/1:0,0:14:26.41:158,26,0	0/0:8,0:13:30.10:0,30,526	0/0:25,1:31:18.74:0,19,744	0/0:29,0:33:81.28:0,81,1379	0/0:4,0:6:15.03:0,15,231
chr10	72117988	.	C	CA	1363.04	PASS	AB=0.779;AC=6;AF=0.107;AN=56;BaseQRankSum=-1.511;DP=560;FS=1.195;HRun=8;HaplotypeScore=57.7017;InbreedingCoeff=0.6396;MQ=70.49;MQ0=0;MQRankSum=0.148;QD=20.04;ReadPosRankSum=0.017;VQSLOD=3.4448;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.02:0,42,384	0/0:6,0:6:18.01:0,18,165	0/1:9,0:9:21.36:21,0,22	0/0:11,0:11:11.71:0,12,103	0/0:25,0:25:71.79:0,72,630	0/0:27,0:26:66.03:0,66,604	0/0:12,0:12:33.01:0,33,302	0/0:31,0:31:78.03:0,78,710	0/0:21,0:21:57.02:0,57,522	0/0:31,0:31:78:0,78,704	0/0:28,0:28:78.01:0,78,706	0/0:23,0:23:59.97:0,60,533	1/1:2,21:23:54.16:623,54,0	0/0:22,0:23:53.66:0,54,516	0/0:22,0:22:57.03:0,57,522	0/0:30,0:29:87.05:0,87,796	0/0:18,0:18:48.02:0,48,439	0/0:9,0:9:26.97:0,27,239	0/0:21,1:22:22.40:0,22,456	0/0:31,0:31:78.03:0,78,714	0/0:9,0:9:27:0,27,242	0/0:24,0:24:60.01:0,60,549	0/1:4,15:19:9.74:405,0,10	1/1:1,16:17:39.12:450,39,0	0/0:10,0:10:24:0,24,215	0/0:16,0:16:39.02:0,39,357	0/0:35,0:34:81:0,81,737	0/0:12,0:12:36.02:0,36,329
chr10	72118702	.	TC	T	1734.53	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.175;DP=719;FS=1.850;HRun=2;HaplotypeScore=66.8887;InbreedingCoeff=0.9997;MQ=90.26;MQ0=0;MQRankSum=-2.873;QD=32.12;ReadPosRankSum=3.117;VQSLOD=3.6706;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,54:54:99:1829,141,0	0/0:11,0:11:33.11:0,33,495	0/0:29,0:29:81.24:0,81,1148	0/0:33,0:33:66.78:0,67,1309	0/0:15,0:15:45.14:0,45,653	0/0:22,0:22:63.21:0,63,943	0/0:26,0:26:75.24:0,75,1105	0/0:33,0:33:99:0,99,1448	0/0:23,0:23:69.23:0,69,1034	0/0:21,0:21:60.19:0,60,881	0/0:25,0:25:72.23:0,72,1058	0/0:20,0:20:60.19:0,60,879	0/0:26,0:26:78.26:0,78,1167	0/0:22,0:22:63.21:0,63,943	0/0:34,0:34:99:0,102,1489	0/0:27,0:27:81.27:0,81,1212	0/0:39,0:39:99:0,117,1726	0/0:24,0:24:66.17:0,66,938	0/0:25,0:25:75.19:0,75,1075	0/0:18,0:18:48.15:0,48,694	0/0:23,0:23:69.23:0,69,1032	0/0:28,0:28:84.26:0,84,1215	0/0:22,0:22:66.16:0,66,925	0/0:31,0:31:84.27:0,84,1238	0/0:24,0:24:72.24:0,72,1077	0/0:25,0:25:75.25:0,75,1123	0/0:18,0:18:45.15:0,45,674	0/0:21,0:21:54.16:0,54,770
chr10	72119107	.	CTTTCTTTCTT	C	1889.16	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.220;DP=525;FS=6.812;HRun=0;HaplotypeScore=159.7277;InbreedingCoeff=0.9345;MQ=79.14;MQ0=0;MQRankSum=-6.393;QD=65.14;ReadPosRankSum=-0.817;VQSLOD=3.0431;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,105,5064	0/0:6,0:6:15.05:0,15,780	0/0:24,0:23:54.09:0,54,2174	0/0:17,0:15:35.85:0,36,1046	0/0:31,0:31:81.25:0,81,3651	0/0:21,0:21:63.20:0,63,2991	0/0:15,0:15:39.13:0,39,1909	0/0:24,0:24:51.17:0,51,2140	0/0:13,0:13:36.12:0,36,1871	0/0:21,0:20:57.20:0,57,2639	0/0:15,0:15:42.13:0,42,1951	0/0:15,0:15:45.15:0,45,2337	0/0:20,0:20:54.17:0,54,2532	0/0:10,0:10:27.09:0,27,1202	0/0:22,0:22:63.20:0,63,2984	0/0:20,0:20:57.20:0,57,2809	0/0:33,0:33:87.26:0,87,3897	0/0:13,0:13:36.12:0,36,1803	0/0:17,0:17:39.12:0,39,1622	0/0:20,0:20:54.19:0,54,2752	0/0:16,0:16:42.13:0,42,1947	0/0:16,0:16:45.12:0,45,1940	0/0:16,0:16:39.12:0,39,1830	0/0:13,0:13:36.12:0,36,1639	0/0:22,0:22:63.22:0,63,3212	1/1:7,18:25:66.17:1810,66,0	0/0:17,0:16:48.16:0,48,2333	1/1:2,2:4:6.02:191,6,0
chr10	72119143	.	T	TG	4334.60	PASS	AB=0.722;AC=19;AF=0.339;AN=56;BaseQRankSum=-7.412;DP=519;FS=13.776;HRun=8;HaplotypeScore=62.8139;InbreedingCoeff=0.8813;MQ=72.75;MQ0=0;MQRankSum=-0.470;QD=24.08;ReadPosRankSum=0.862;VQSLOD=4.4765;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,38:41:99:1142,99,0	0/0:7,0:7:18:0,18,165	0/0:22,0:21:41.92:0,42,354	0/0:17,0:16:5.19:0,5,150	0/0:33,0:33:93.05:0,93,850	0/0:19,0:19:51.02:0,51,467	0/0:17,0:17:51.03:0,51,467	0/0:21,0:21:45.01:0,45,409	0/0:11,0:11:30.02:0,30,275	1/1:5,13:18:39.12:450,39,0	1/1:4,15:19:45.13:513,45,0	0/0:18,0:18:45.02:0,45,412	1/1:2,11:13:27.08:311,27,0	0/1:8,5:13:99:137,0,156	0/0:18,0:18:45.02:0,45,412	0/0:19,0:19:50.98:0,51,453	0/0:27,0:27:66:0,66,597	1/1:10,0:13:14.39:78,14,0	0/0:18,0:19:44.03:0,44,383	0/0:22,0:22:54.01:0,54,494	0/0:16,0:16:45.02:0,45,412	0/0:19,0:19:51.02:0,51,466	1/1:2,19:21:54.16:623,54,0	1/1:2,15:17:36.11:415,36,0	0/0:14,0:14:29.98:0,30,269	1/1:4,18:22:54.15:613,54,0	0/0:20,0:19:54.03:0,54,494	1/1:0,3:3:5.95:52,6,0
chr10	72119599	.	A	AG	1621.32	PASS	AB=0.913;AC=19;AF=0.339;AN=56;BaseQRankSum=9.753;DP=543;FS=6.086;HRun=0;HaplotypeScore=72.5322;InbreedingCoeff=0.3729;MQ=57.96;MQ0=11;MQRankSum=0.329;QD=7.14;ReadPosRankSum=-4.932;VQSLOD=1.5486;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:6:54,6,0	0/0:4,0:4:12.04:0,12,168	0/1:15,0:5:8.91:9,0,78	0/1:7,0:4:3.18:3,0,74	0/1:22,7:29:76.88:77,0,651	0/0:20,0:20:54.14:0,54,732	0/0:19,1:17:3.13:0,3,519	0/0:32,0:31:84.21:0,84,1093	0/0:19,0:19:6.97:0,7,403	1/1:20,0:18:48.55:568,49,0	1/1:18,0:18:29.99:386,30,0	0/0:18,0:18:51.15:0,51,681	1/1:9,0:9:8.98:79,9,0	0/0:17,0:17:47.72:0,48,652	0/0:19,0:19:57.19:0,57,797	0/0:21,0:21:63.19:0,63,847	0/0:34,0:33:83.14:0,83,1123	0/1:4,4:7:4.01:153,0,4	0/0:20,0:19:29.01:0,29,637	0/1:22,0:22:66.56:67,0,524	0/1:14,0:13:35.49:35,0,330	0/0:25,0:25:1.79:0,2,695	1/1:13,0:12:2.79:33,3,0	1/1:6,3:9:23.97:259,24,0	0/0:30,0:30:78.71:0,79,1047	0/0:28,0:28:84.26:0,84,1137	0/1:32,3:34:78.64:79,0,1054	0/0:8,0:7:21.07:0,21,293
chr10	72121274	.	G	GA	1045.86	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-0.265;DP=542;FS=0.000;HRun=0;HaplotypeScore=91.5531;InbreedingCoeff=0.9325;MQ=72.44;MQ0=1;MQRankSum=-1.442;QD=33.74;ReadPosRankSum=0.001;VQSLOD=3.0186;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:60.03:0,60,719	0/0:9,0:9:24.04:0,24,297	0/0:26,0:21:44.95:0,45,494	0/0:13,0:12:2.37:0,2,84	0/0:23,0:23:68.96:0,69,897	0/0:21,0:21:56.54:0,57,730	0/0:22,0:22:60.14:0,60,781	0/0:26,0:26:62.33:0,62,864	0/0:21,0:21:63.19:0,63,838	0/0:22,0:22:63.13:0,63,812	0/0:17,0:17:48.15:0,48,639	0/0:18,0:18:54.17:0,54,728	1/1:1,8:9:26.30:372,26,0	0/0:11,0:11:30.08:0,30,391	0/0:26,0:26:75.17:0,75,998	0/0:16,0:16:48.15:0,48,648	0/0:35,0:35:99:0,102,1360	0/0:16,0:15:45.10:0,45,582	0/0:28,0:28:81.20:0,81,1057	0/0:15,0:15:45.14:0,45,607	0/0:17,0:17:51.15:0,51,693	0/0:24,0:24:72.15:0,72,970	1/1:1,9:10:25.18:361,25,0	1/1:0,12:12:30.10:455,30,0	0/0:11,0:11:27.09:0,27,369	0/0:26,0:26:78.25:0,78,1069	0/0:33,0:33:99:0,99,1284	0/0:10,0:10:30.04:0,30,378
chr10	72121315	.	C	CT	538.12	PASS	AB=0.943;AC=6;AF=0.111;AN=54;BaseQRankSum=1.681;DP=494;FS=5.787;HRun=9;HaplotypeScore=84.4961;InbreedingCoeff=0.6055;MQ=49.40;MQ0=23;MQRankSum=-4.360;QD=6.99;ReadPosRankSum=-2.627;VQSLOD=1.1495;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:27,4:27:10.65:134,0,11	0/0:10,0:10:13.99:0,14,108	./.	0/1:5,0:5:0:0,0,0	0/0:22,0:22:32.53:0,33,265	0/0:22,0:22:35.96:0,36,312	0/0:19,0:19:20.02:0,20,178	0/0:17,0:13:14.89:0,15,129	0/0:19,0:18:32.79:0,33,279	1/1:16,9:23:10.69:307,11,0	1/1:11,5:15:21.90:219,22,0	0/0:13,0:13:14.90:0,15,130	0/0:10,0:10:14.91:0,15,130	0/0:10,0:10:17.98:0,18,155	0/0:26,0:24:20.41:0,20,338	0/0:14,0:12:23.79:0,24,197	0/0:36,0:34:43.26:0,43,366	0/0:18,0:18:19.23:0,19,179	0/0:13,0:11:26.95:0,27,230	0/0:24,0:23:28.83:0,29,240	0/0:12,0:12:11.48:0,11,102	0/0:25,0:24:32.76:0,33,285	0/0:15,0:15:29.82:0,30,252	0/0:10,0:10:1.98:0,2,24	0/0:8,0:8:8.94:0,9,74	0/0:28,0:26:44.93:0,45,390	0/0:28,0:27:44.89:0,45,388	0/0:12,0:7:2.95:0,3,26
chr10	72122098	.	A	AT	2074.45	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.569;DP=570;FS=2.886;HRun=9;HaplotypeScore=60.9172;InbreedingCoeff=0.9682;MQ=83.76;MQ0=0;MQRankSum=1.445;QD=26.94;ReadPosRankSum=0.418;VQSLOD=4.0278;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:68.96:0,69,594	0/0:4,0:4:12:0,12,104	0/0:21,0:21:33.53:0,34,262	0/0:12,1:13:7.38:0,7,102	0/0:21,0:21:56.95:0,57,488	0/0:19,0:19:50.99:0,51,443	0/0:17,0:17:47.96:0,48,412	0/0:31,0:31:53.95:0,54,468	0/0:20,0:20:59.96:0,60,516	0/0:34,0:34:77.91:0,78,670	0/0:28,0:28:80.98:0,81,703	0/0:16,0:16:41.96:0,42,361	1/1:0,18:18:54.15:597,54,0	0/0:15,0:15:41.98:0,42,362	0/0:21,0:21:56.98:0,57,495	0/0:13,0:13:35.99:0,36,312	0/0:22,0:22:59.99:0,60,521	1/1:1,16:17:39.11:431,39,0	0/0:17,0:17:38.98:0,39,338	0/0:17,0:17:50.99:0,51,442	0/0:26,0:26:68.96:0,69,596	0/0:26,0:26:71.97:0,72,622	1/1:2,20:23:55.98:628,56,0	1/1:1,17:19:53.98:578,54,0	0/0:16,0:16:47.99:0,48,417	0/0:25,1:26:35.76:0,36,536	0/0:36,0:36:91.97:0,92,780	0/0:8,0:8:20.99:0,21,182
chr10	72122384	.	GA	G	1176.42	PASS	AB=0.942;AC=14;AF=0.250;AN=56;BaseQRankSum=8.099;DP=367;FS=5.071;HRun=11;HaplotypeScore=39.0797;InbreedingCoeff=0.6176;MQ=76.57;MQ0=0;MQRankSum=-3.202;QD=9.05;ReadPosRankSum=2.790;VQSLOD=1.6074;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:62.93:517,63,0	0/0:5,0:5:9.01:0,9,88	0/1:13,0:12:3.59:4,0,150	0/0:9,0:9:9.43:0,9,81	0/0:7,0:7:18.03:0,18,184	0/0:16,0:16:42.08:0,42,434	0/0:12,0:12:27.06:0,27,281	0/0:29,0:30:65.99:0,66,675	0/0:17,0:18:44.27:0,44,506	0/0:17,1:18:23.47:0,23,450	0/1:17,3:21:13.94:14,0,466	0/0:6,0:6:18.03:0,18,185	1/1:2,12:14:26.95:222,27,0	0/0:5,0:5:12.03:0,12,124	0/0:6,0:6:18.03:0,18,185	0/0:9,0:10:26.89:0,27,264	0/0:23,0:23:60.14:0,60,631	1/1:2,14:16:32.76:271,33,0	0/0:14,1:15:11.42:0,11,308	0/0:9,0:10:20.89:0,21,206	0/1:15,2:17:4.24:4,0,344	0/0:11,1:12:2.39:0,2,209	1/1:1,8:9:17.98:148,18,0	1/1:0,7:7:20.96:169,21,0	0/1:6,0:6:6.31:6,0,142	0/0:7,0:7:18.01:0,18,181	0/0:12,0:12:30.04:0,30,308	0/0:16,0:16:47.98:0,48,454
chr10	72122500	.	CAATA	C	133.99	PASS	AB=1.000;AC=9;AF=0.173;AN=52;BaseQRankSum=5.063;DP=261;FS=0.000;HRun=0;HaplotypeScore=49.0001;InbreedingCoeff=0.4178;MQ=65.45;MQ0=1;MQRankSum=-2.082;QD=1.89;ReadPosRankSum=0.653;VQSLOD=0.8813;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,7:12:9.03:139,9,0	0/0:2,0:2:6.01:0,6,96	./.	0/0:6,0:6:0:0,0,0	0/0:14,0:14:9.03:0,9,190	0/0:10,0:10:12.04:0,12,284	0/0:5,0:5:3.01:0,3,71	0/0:24,0:24:20.64:0,21,151	0/0:8,0:8:18.06:0,18,362	1/1:14,0:14:2.74:12,3,0	1/1:14,0:14:2.92:17,3,0	0/0:3,0:3:3.01:0,3,71	0/0:3,0:3:2.88:0,3,15	0/0:2,0:2:3.01:0,3,71	0/0:9,0:9:9.03:0,9,213	0/0:10,0:10:5.99:0,6,50	0/0:20,0:20:32.93:0,33,375	1/1:20,0:20:11.84:79,12,0	0/0:15,0:14:9.02:0,9,169	0/0:5,0:5:6.01:0,6,96	0/0:4,0:4:9.02:0,9,167	0/0:3,0:3:3.01:0,3,71	./.	0/0:3,0:3:2.99:0,3,24	0/0:9,0:9:9.03:0,9,172	0/1:11,0:11:15.90:16,0,157	0/0:9,0:9:12.01:0,12,191	0/0:7,0:7:12.04:0,12,276
chr10	72122527	.	TAAATAAATAAATAAAC	T	697.96	PASS	AB=0.944;AC=6;AF=0.111;AN=54;BaseQRankSum=7.486;DP=224;FS=14.961;HRun=0;HaplotypeScore=101.6959;InbreedingCoeff=0.4008;MQ=55.43;MQ0=2;MQRankSum=1.790;QD=14.54;ReadPosRankSum=-0.050;VQSLOD=1.2105;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:21.86:0,22,601	0/0:4,0:4:12.01:0,12,384	0/0:1,0:1:2.98:0,3,21	0/0:2,0:2:3.46:0,3,24	0/0:6,0:6:18.04:0,18,871	0/0:9,0:9:24.02:0,24,1088	0/0:3,0:3:9.02:0,9,334	0/0:32,0:31:83.93:0,84,1369	0/0:9,0:9:27.06:0,27,1426	1/1:0,12:12:23.92:254,24,0	1/1:0,12:12:26.40:223,26,0	0/0:3,0:3:9.02:0,9,465	0/0:2,0:2:6.02:0,6,176	0/0:4,0:4:11.99:0,12,308	0/0:7,0:7:18.04:0,18,879	0/0:5,0:5:9.02:0,9,292	0/0:19,0:19:57.13:0,57,2253	0/1:16,0:16:69.77:237,0,70	0/0:14,0:13:27.03:0,27,1186	0/0:3,0:3:9.01:0,9,360	0/0:6,0:6:18.02:0,18,705	0/0:1,0:1:3.01:0,3,236	./.	0/0:1,0:1:3.01:0,3,118	0/0:9,0:9:27.06:0,27,1124	0/1:7,1:8:99:116,0,735	0/0:13,0:12:39:0,39,1128	0/0:9,0:9:27.01:0,27,1051
chr10	72123455	.	GT	G	1723.69	PASS	AB=0.892;AC=12;AF=0.214;AN=56;BaseQRankSum=9.512;DP=479;FS=0.446;HRun=11;HaplotypeScore=53.2966;InbreedingCoeff=0.6429;MQ=68.38;MQ0=1;MQRankSum=-1.114;QD=11.73;ReadPosRankSum=1.362;VQSLOD=3.0142;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:59.93:493,60,0	0/0:12,0:12:27.05:0,27,274	0/1:12,1:12:1.43:1,0,152	0/0:10,0:9:14.59:0,15,120	0/0:28,0:28:69.16:0,69,728	0/0:20,1:22:35.30:0,35,548	0/0:14,0:14:35.99:0,36,359	0/0:21,0:21:63.14:0,63,655	0/0:15,0:15:33.08:0,33,352	1/1:7,25:33:73.94:597,74,0	1/1:1,17:19:52.88:416,53,0	0/0:2,0:11:25.60:0,26,129	0/0:14,0:14:36.08:0,36,378	0/0:18,0:18:51.11:0,51,535	0/0:10,0:11:29.91:0,30,302	0/0:14,0:14:36.09:0,36,384	0/0:22,1:23:38.49:0,38,606	1/1:4,15:19:41.94:344,42,0	0/1:11,2:13:16.22:16,0,236	0/0:29,0:29:69.15:0,69,716	0/0:11,0:11:11.82:0,12,297	0/0:8,0:8:21.04:0,21,218	0/0:13,0:13:33.08:0,33,351	0/0:11,0:11:33.06:0,33,343	0/0:15,0:15:39.10:0,39,416	0/1:15,3:18:22.85:23,0,375	0/0:31,1:32:44.53:0,45,678	0/1:10,1:11:0.60:1,0,190
chr10	72124831	.	T	TCACA	1194.32	PASS	AB=1.000;AC=16;AF=0.348;AN=46;BaseQRankSum=3.441;DP=484;FS=7.612;HRun=0;HaplotypeScore=98.2487;InbreedingCoeff=0.6240;MQ=71.61;MQ0=9;MQRankSum=-3.190;QD=7.42;ReadPosRankSum=-4.108;VQSLOD=-0.1335;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:5.69:0,6,49	0/0:3,0:3:3.01:0,3,43	./.	./.	0/0:24,0:24:9.02:0,9,134	0/0:21,0:21:12.01:0,12,143	0/0:12,0:12:9.03:0,9,133	./.	0/0:18,0:19:9.01:0,9,120	1/1:22,0:22:14.66:131,15,0	0/1:22,0:21:0:0,0,0	0/0:11,0:11:9.03:0,9,135	1/1:16,0:15:9.03:106,9,0	0/0:3,0:4:6.01:0,6,74	1/1:10,0:17:14.97:64,15,0	0/0:18,0:19:14.24:0,14,206	0/0:20,0:20:15.48:0,15,202	1/1:16,4:21:29.06:416,29,0	1/1:6,0:6:1.36:3,1,0	0/0:14,0:16:8.93:0,9,73	0/0:28,0:28:3:0,3,27	0/1:18,0:18:34.88:35,0,62	./.	1/1:23,0:23:24.05:374,24,0	0/0:13,0:13:6.01:0,6,92	1/1:11,2:15:15.03:226,15,0	0/0:8,0:10:5.49:0,5,41	./.
chr10	72125965	.	G	GT	2150.71	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-3.930;DP=604;FS=3.559;HRun=7;HaplotypeScore=58.1794;InbreedingCoeff=0.9728;MQ=58.02;MQ0=10;MQRankSum=-1.073;QD=15.70;ReadPosRankSum=3.368;VQSLOD=3.5736;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,132,1246	0/0:11,0:10:27.04:0,27,261	0/0:21,0:8:11.01:0,11,85	0/0:24,0:12:27.04:0,27,261	0/0:23,0:23:57.09:0,57,549	0/0:23,0:23:63.08:0,63,603	0/0:17,0:16:45.07:0,45,434	0/0:20,0:20:42.03:0,42,394	0/0:15,0:13:36.04:0,36,342	1/1:8,23:31:66.13:753,66,0	1/1:4,20:22:45.14:544,45,0	0/0:20,0:20:51.06:0,51,486	1/1:2,1:13:20.62:130,21,0	0/0:20,0:20:60.10:0,60,579	0/0:26,0:26:63.07:0,63,603	0/0:16,0:16:39.06:0,39,377	0/0:22,0:22:60.10:0,60,579	1/1:7,23:29:60.18:725,60,0	0/0:16,0:14:24.02:0,24,232	0/0:21,0:21:48.07:0,48,463	0/0:18,0:17:39.04:0,39,369	0/0:22,0:22:54.08:0,54,520	1/1:7,0:19:10.96:92,11,0	1/1:3,0:20:14.71:92,15,0	0/0:26,0:26:69.10:0,69,666	0/0:23,0:22:63.08:0,63,601	0/0:27,0:27:66.02:0,66,611	0/0:7,0:7:12.02:0,12,116
chr10	72126912	.	GCA	G	233.66	PASS	AB=0.859;AC=14;AF=0.269;AN=52;BaseQRankSum=2.582;DP=493;FS=0.000;HRun=0;HaplotypeScore=74.0272;InbreedingCoeff=-0.1127;MQ=68.43;MQ0=9;MQRankSum=0.066;QD=1.20;ReadPosRankSum=0.563;VQSLOD=1.2551;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:36:12:0,12,105	1/1:7,0:7:2.99:25,3,0	./.	./.	0/1:13,3:16:20.91:21,0,119	0/1:13,5:18:44.82:45,0,201	0/1:22,1:23:18.07:18,0,162	0/0:21,0:20:6.01:0,6,71	0/1:11,1:13:17.89:18,0,119	0/0:10,0:15:17.23:0,17,161	0/0:5,0:12:6.57:0,7,67	0/1:18,2:20:5.85:6,0,327	0/0:6,0:7:9.02:0,9,113	0/0:10,0:10:15.05:0,15,225	0/1:13,1:14:38.81:39,0,286	0/1:4,2:8:28.79:29,0,143	0/1:26,6:32:99:140,0,517	1/1:19,0:17:4.87:19,5,0	0/0:4,0:4:3.01:0,3,45	0/1:9,2:11:8.82:9,0,244	0/0:41,0:40:46.99:0,47,683	0/0:14,0:15:3.91:0,4,209	0/0:15,0:16:16.35:0,16,162	0/0:35,0:44:58.02:0,58,514	0/1:10,3:13:8.89:9,0,250	0/0:14,0:15:12.92:0,13,162	0/0:15,0:14:33.56:0,34,455	0/0:2,0:2:5.99:0,6,67
chr10	72127025	.	A	AT	1027.71	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-5.032;DP=509;FS=4.868;HRun=10;HaplotypeScore=57.4645;InbreedingCoeff=0.7928;MQ=70.34;MQ0=0;MQRankSum=-2.213;QD=22.34;ReadPosRankSum=1.540;VQSLOD=4.7369;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:36:75.97:0,76,603	0/0:6,0:6:17.96:0,18,145	0/0:21,0:15:25.72:0,26,186	0/0:26,0:23:4.02:0,4,188	0/0:27,1:28:41.93:0,42,534	0/0:13,1:15:0.03:0,0,192	0/0:14,0:14:38.95:0,39,320	0/0:30,0:29:71.86:0,72,589	0/0:21,0:21:52.96:0,53,422	0/0:16,0:16:10.22:0,10,245	0/0:17,0:18:40.97:0,41,326	0/0:7,0:7:20.98:0,21,172	1/1:2,9:11:5.43:263,5,0	0/0:16,0:16:44.62:0,45,356	0/0:10,0:10:26.96:0,27,222	0/0:12,0:12:26.95:0,27,222	0/0:40,0:40:99:0,111,911	0/0:16,0:16:41.95:0,42,345	0/0:19,0:20:43.97:0,44,349	0/0:14,0:14:38.95:0,39,320	0/0:25,0:25:53.88:0,54,440	0/0:14,0:14:29.93:0,30,246	1/1:5,10:15:42.07:432,42,0	1/1:1,19:20:34.01:466,34,0	0/0:12,0:13:38:0,38,301	0/0:17,0:17:44.94:0,45,367	0/0:23,0:22:62.90:0,63,514	0/0:3,0:3:8.99:0,9,74
chr10	72127190	.	T	TG	1045.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.611;DP=519;FS=13.666;HRun=0;HaplotypeScore=62.8063;InbreedingCoeff=0.8014;MQ=70.57;MQ0=3;MQRankSum=-0.198;QD=26.13;ReadPosRankSum=4.545;VQSLOD=3.6809;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,39:40:94.82:1140,95,0	0/0:9,0:9:27.03:0,27,322	0/0:28,0:10:24.25:0,24,222	0/0:21,0:12:1.88:0,2,82	0/0:21,0:21:58.22:0,58,600	0/0:13,0:13:30.02:0,30,333	0/0:16,0:16:38.46:0,38,393	0/0:24,0:23:61.57:0,62,658	0/0:19,0:19:55.63:0,56,585	0/0:26,0:26:62.17:0,62,689	0/0:8,0:8:24.05:0,24,271	0/0:10,0:10:27.04:0,27,299	0/0:8,0:8:21.05:0,21,247	0/0:14,0:14:37.59:0,38,410	0/0:14,0:14:33.06:0,33,368	0/0:18,0:18:52.92:0,53,594	0/0:40,0:40:99:0,108,1200	0/0:16,0:16:37.12:0,37,410	0/0:13,0:13:19.08:0,19,378	0/0:10,0:10:30.03:0,30,337	0/0:9,0:9:27.03:0,27,283	0/0:17,0:17:51:0,51,530	0/0:20,0:20:57.08:0,57,635	0/0:31,0:31:88.97:0,89,1058	0/0:16,0:16:46.62:0,47,473	0/0:17,0:17:32.06:0,32,388	0/0:35,0:34:99:0,99,985	0/0:5,0:5:14.04:0,14,124
chr10	72127872	.	C	CT	1710.30	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-2.287;DP=553;FS=2.420;HRun=9;HaplotypeScore=61.6054;InbreedingCoeff=0.9749;MQ=67.12;MQ0=1;MQRankSum=0.244;QD=22.21;ReadPosRankSum=1.476;VQSLOD=4.6068;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:98.95:0,99,859	0/0:11,0:11:32.97:0,33,281	0/0:20,0:16:40.86:0,41,327	0/0:11,0:7:8.33:0,8,62	0/0:25,0:25:65.99:0,66,573	0/0:15,0:15:41.99:0,42,365	0/0:15,0:15:44.99:0,45,390	0/0:32,0:33:77:0,77,654	0/0:14,0:14:38.97:0,39,334	1/1:10,17:27:51.11:552,51,0	1/1:4,26:30:49.15:771,49,0	0/0:9,0:9:26.99:0,27,234	0/0:13,0:13:35.99:0,36,312	0/0:12,0:12:32.99:0,33,287	0/0:17,0:17:47.99:0,48,417	0/0:11,0:11:29.98:0,30,257	0/0:26,0:26:65.95:0,66,567	1/1:3,17:20:48.13:531,48,0	0/0:30,0:30:65.97:0,66,573	0/0:22,0:22:53.97:0,54,469	0/0:11,0:11:32.99:0,33,286	0/0:11,0:11:23.98:0,24,208	0/0:20,0:20:47.99:0,48,417	0/0:18,0:18:47.99:0,48,417	0/0:22,0:22:59.98:0,60,521	0/0:22,0:22:62.95:0,63,541	0/0:22,0:22:59.99:0,60,521	0/0:29,0:29:68.98:0,69,599
chr10	72130523	.	ATAGG	A	1980.57	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=7.511;DP=605;FS=1.258;HRun=0;HaplotypeScore=101.5188;InbreedingCoeff=0.8988;MQ=59.93;MQ0=3;MQRankSum=-0.378;QD=15.84;ReadPosRankSum=1.647;VQSLOD=3.3326;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:26:9.01:84,9,0	0/0:8,0:8:9.03:0,9,174	./.	./.	0/0:22,0:22:21.07:0,21,490	0/0:12,0:12:18.06:0,18,415	0/0:23,0:23:21.04:0,21,397	0/0:23,0:23:3.01:0,3,68	0/0:25,0:25:48.09:0,48,940	0/0:18,0:32:51.14:0,51,807	0/0:17,0:29:43.07:0,43,582	0/0:29,0:29:48.12:0,48,1067	1/1:10,13:23:36.12:559,36,0	0/0:26,0:26:45.15:0,45,1056	0/0:30,0:30:60.21:0,60,1393	0/0:16,0:16:33.11:0,33,776	0/0:24,0:24:45.13:0,45,925	0/0:18,0:18:33.03:0,33,648	0/0:13,0:12:3.01:0,3,71	0/0:22,0:22:39.13:0,39,890	0/0:30,0:30:33.11:0,33,757	0/0:26,0:26:51.18:0,51,1156	1/1:12,10:22:21.07:326,21,0	1/1:7,6:13:15.05:233,15,0	0/0:18,0:18:33.11:0,33,762	1/1:16,14:30:42.12:629,42,0	0/0:23,0:23:51.18:0,51,1195	1/1:4,7:11:21.07:326,21,0
chr10	72132018	.	AGTAG	A	586.47	PASS	AB=0.845;AC=9;AF=0.161;AN=56;BaseQRankSum=5.999;DP=420;FS=0.000;HRun=0;HaplotypeScore=78.9746;InbreedingCoeff=-0.0058;MQ=54.57;MQ0=5;MQRankSum=-5.810;QD=4.85;ReadPosRankSum=-0.734;VQSLOD=1.6472;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,6:8:3.01:50,3,0	0/0:8,0:8:18:0,18,344	0/0:11,0:7:15.03:0,15,285	0/0:21,0:12:27.08:0,27,571	0/0:7,0:7:15.05:0,15,373	0/0:6,0:6:9.03:0,9,224	0/0:11,0:11:27.05:0,27,554	0/0:39,0:38:96.26:0,96,2276	0/0:23,0:23:63.22:0,63,1538	0/1:36,5:41:99:221,0,1074	0/1:8,2:10:79.22:79,0,238	0/0:13,0:13:36.12:0,36,880	0/1:6,1:7:41.88:42,0,122	0/0:14,0:14:36.12:0,36,875	0/0:14,0:14:36.12:0,36,899	0/0:17,0:17:42.14:0,42,1014	0/1:17,1:18:9.77:10,0,848	0/1:13,3:15:99:168,0,454	0/0:19,0:19:39.03:0,39,967	0/0:14,0:14:39.13:0,39,954	0/0:17,0:17:45.15:0,45,1032	0/0:10,0:10:24.08:0,24,599	0/1:6,2:8:69.49:69,0,329	0/1:9,3:11:83.73:84,0,257	0/0:10,0:10:24.05:0,24,545	0/0:19,0:19:51.18:0,51,1253	0/0:8,0:8:21.07:0,21,508	0/0:16,0:14:39.13:0,39,905
chr10	72132098	.	AGTAG	A	350.58	PASS	AC=2;AF=0.045;AN=44;BaseQRankSum=3.495;DP=569;FS=7.145;HRun=0;HaplotypeScore=90.1689;InbreedingCoeff=0.5658;MQ=47.02;MQ0=30;MQRankSum=2.569;QD=11.31;ReadPosRankSum=-1.688;VQSLOD=2.1049;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:14:5.92:0,6,40	./.	./.	./.	0/0:6,0:6:5.85:0,6,141	0/0:25,0:25:39.08:0,39,808	0/0:17,0:16:24.08:0,24,546	0/0:42,0:36:9.03:0,9,150	0/0:26,0:26:30.04:0,30,590	0/0:14,0:11:19.71:0,20,175	0/0:2,0:2:3:0,3,25	./.	0/0:7,0:11:6.91:0,7,107	0/0:29,0:28:42.09:0,42,888	0/0:38,0:35:54.19:0,54,1262	0/0:35,0:35:60.19:0,60,1384	0/0:19,0:19:27.09:0,27,595	0/0:13,0:18:21.07:0,21,363	0/0:30,0:25:37.37:0,37,811	0/0:14,0:13:14.99:0,15,174	0/0:45,0:43:72.20:0,72,1576	./.	0/0:7,0:6:6.02:0,6,141	0/0:21,0:18:30.09:0,30,653	0/0:9,0:10:12.04:0,12,263	1/1:14,17:28:30.09:442,30,0	0/0:20,0:20:28.91:0,29,637	./.
chr10	72132278	.	AGTAGGTAG	A	2501.08	PASS	AB=0.789;AC=39;AF=0.813;AN=48;BaseQRankSum=-3.153;DP=611;FS=0.000;HRun=0;HaplotypeScore=106.2188;InbreedingCoeff=0.3648;MQ=39.83;MQ0=122;MQRankSum=-1.739;QD=5.31;ReadPosRankSum=-1.511;VQSLOD=1.9119;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:23.96:0,24,233	1/1:3,2:5:3.01:72,3,0	./.	./.	1/1:20,0:9:2.97:20,3,0	0/0:17,0:22:26.92:0,27,213	1/1:28,0:11:3.01:73,3,0	./.	1/1:15,14:25:6.23:285,6,0	1/1:14,0:19:11.50:115,11,0	1/1:15,0:12:2.90:16,3,0	1/1:24,0:15:11.93:158,12,0	0/0:8,0:5:1.25:0,1,3	1/1:24,12:25:6.02:145,6,0	1/1:27,9:25:5.91:128,6,0	1/1:20,11:25:15.05:367,15,0	1/1:11,0:9:5.94:45,6,0	1/1:12,0:12:6.02:112,6,0	1/1:21,4:14:12.01:241,12,0	1/1:9,6:12:14.84:147,15,0	0/1:42,15:48:3.97:13,0,4	1/1:6,5:8:11.90:145,12,0	0/1:6,0:7:0:0,0,0	./.	1/1:12,0:8:11.97:222,12,0	1/1:29,0:19:5.05:59,5,0	1/1:16,9:20:9.50:218,10,0	0/1:9,0:6:18.42:50,0,18
chr10	72134202	.	TA	T	1340.13	PASS	AB=0.869;AC=16;AF=0.286;AN=56;BaseQRankSum=9.901;DP=542;FS=0.931;HRun=14;HaplotypeScore=75.1114;InbreedingCoeff=0.6057;MQ=61.81;MQ0=11;MQRankSum=1.742;QD=6.98;ReadPosRankSum=2.861;VQSLOD=2.9019;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,30:34:45.59:394,46,0	0/0:6,0:6:6.19:0,6,80	0/0:22,0:14:14.96:0,15,125	0/0:16,0:13:9.84:0,10,108	0/0:24,1:25:40.24:0,40,471	0/0:14,0:13:21:0,21,188	0/0:15,1:17:21.21:0,21,307	0/0:27,1:24:41.84:0,42,362	0/0:18,0:21:9.46:0,9,216	1/1:4,17:21:52.68:351,53,0	1/1:5,9:14:28.81:191,29,0	0/0:13,0:12:2.40:0,2,159	1/1:1,14:15:32.33:225,32,0	0/0:14,0:14:20.76:0,21,178	0/0:23,1:26:14.03:0,14,354	0/1:14,5:18:5.42:5,0,231	0/0:24,0:27:39.10:0,39,484	0/0:18,0:17:24.81:0,25,212	0/1:21,2:19:5.54:6,0,218	0/1:15,3:18:25.81:26,0,204	0/0:13,0:13:15:0,15,131	0/0:18,0:17:25.26:0,25,222	1/1:4,7:11:23.51:152,24,0	1/1:1,15:16:23.76:163,24,0	0/0:21,1:22:27.36:0,27,360	0/1:18,2:20:16.95:17,0,140	0/0:26,1:28:16.32:0,16,399	0/0:18,1:18:7.69:0,8,203
chr10	72134301	.	ATGGAATTCAG	A	5100.30	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.319;DP=504;FS=3.011;HRun=0;HaplotypeScore=148.3141;InbreedingCoeff=0.9228;MQ=69.10;MQ0=0;MQRankSum=-8.702;QD=60.00;ReadPosRankSum=-1.086;VQSLOD=4.4812;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.14:0,78,3664	0/0:7,0:7:21.04:0,21,719	0/0:12,0:11:18.28:0,18,743	0/0:18,0:17:28.63:0,29,933	0/0:28,0:28:81.26:0,81,3857	0/0:31,0:31:90.23:0,90,3894	0/0:25,0:25:72.23:0,72,3539	0/0:22,0:22:63.13:0,63,2047	0/0:12,0:12:36.10:0,36,1355	1/1:0,25:24:72.15:1886,72,0	1/1:0,18:18:47.44:1240,47,0	0/0:15,0:15:45.07:0,45,1858	1/1:5,4:9:13.82:564,14,0	0/0:13,0:13:37:0,37,1700	0/0:23,0:23:66.20:0,66,3243	0/0:16,0:16:48.16:0,48,2337	0/0:27,0:26:69.20:0,69,3200	1/1:0,3:3:3.01:100,3,0	0/0:19,0:19:57.16:0,57,2433	0/0:21,0:21:62.80:0,63,2922	0/0:21,0:20:57.16:0,57,2633	0/0:15,0:15:45.15:0,45,2401	1/1:0,15:15:42.14:1147,42,0	1/1:0,15:14:6.02:164,6,0	0/0:19,0:19:57.17:0,57,2766	0/0:24,0:24:72.19:0,72,3045	0/0:21,0:21:63.19:0,63,2917	0/0:3,0:3:9.03:0,9,423
chr10	72135684	.	TTTTG	T	2849.24	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.492;DP=575;FS=5.585;HRun=0;HaplotypeScore=93.5848;InbreedingCoeff=0.9358;MQ=65.11;MQ0=2;MQRankSum=-0.901;QD=36.53;ReadPosRankSum=2.124;VQSLOD=3.7503;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,27:39:74.42:1558,74,0	0/0:8,0:8:18.04:0,18,386	0/0:18,0:17:36.09:0,36,629	0/0:18,0:16:26.28:0,26,455	0/0:32,0:32:72.25:0,72,1747	0/0:18,0:18:45.15:0,45,1076	0/0:7,0:7:15.05:0,15,363	0/0:31,0:31:57.18:0,57,1202	0/0:12,0:12:30.10:0,30,716	1/1:3,19:22:57.16:889,57,0	1/1:3,14:17:33.11:544,33,0	0/0:15,0:15:42.06:0,42,952	0/0:20,0:20:54.18:0,54,1335	0/0:14,0:14:39.12:0,39,896	0/0:19,0:19:51.15:0,51,1210	0/0:21,0:21:54.19:0,54,1326	0/0:23,0:23:60.17:0,60,1355	0/0:18,0:18:39.08:0,39,879	0/0:20,1:20:3.45:0,3,1052	0/0:19,0:19:54.17:0,54,1203	0/0:17,0:17:45.15:0,45,1015	0/0:25,0:25:69.22:0,69,1571	0/0:36,0:36:96.30:0,96,2162	0/0:15,0:14:33.07:0,33,649	0/0:21,0:21:54.19:0,54,1303	0/0:19,0:19:45.15:0,45,1105	0/0:35,0:35:93.30:0,93,2238	0/0:15,0:15:36.12:0,36,817
chr10	72136170	.	A	AT	1151.40	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.161;DP=523;FS=3.047;HRun=7;HaplotypeScore=45.9737;InbreedingCoeff=0.9011;MQ=69.83;MQ0=2;MQRankSum=0.783;QD=27.41;ReadPosRankSum=0.604;VQSLOD=4.1881;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.11:0,72,695	0/0:13,0:13:33.05:0,33,319	0/0:14,0:12:24.04:0,24,232	0/0:10,0:8:8.20:0,8,106	0/0:30,0:30:81.12:0,81,782	0/0:32,0:32:93.11:0,93,882	0/0:15,0:15:36.04:0,36,342	0/0:28,0:28:66.07:0,66,629	0/0:16,0:16:36.04:0,36,344	1/1:3,16:19:48.13:567,48,0	1/1:2,21:23:60.10:705,60,0	0/0:14,0:14:14.68:0,15,271	0/0:22,0:22:60.07:0,60,569	0/0:9,0:9:21.03:0,21,203	0/0:13,0:13:36.04:0,36,342	0/0:17,0:17:45.07:0,45,435	0/0:18,0:18:54.03:0,54,506	0/0:1,0:15:22.41:0,22,66	0/0:33,0:31:84.06:0,84,792	0/0:23,0:23:66.07:0,66,623	0/0:13,0:13:30.04:0,30,285	0/0:3,0:3:6:0,6,58	0/0:12,0:12:33.04:0,33,315	0/0:7,0:7:18.03:0,18,174	0/0:21,0:21:63.09:0,63,605	0/0:30,0:30:75.09:0,75,718	0/0:31,0:31:81.13:0,81,782	0/0:15,0:15:45.07:0,45,435
chr10	72137986	.	G	GCA	1183.18	PASS	AB=0.781;AC=9;AF=0.161;AN=56;BaseQRankSum=6.491;DP=558;FS=1.293;HRun=0;HaplotypeScore=94.8183;InbreedingCoeff=0.2443;MQ=60.07;MQ0=9;MQRankSum=-0.962;QD=8.90;ReadPosRankSum=1.331;VQSLOD=3.5416;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:31.92:0,32,133	0/0:8,0:8:14.78:0,15,183	0/0:17,0:3:3:0,3,26	0/0:13,0:3:0.15:0,0,2	0/0:14,0:14:42.02:0,42,542	0/0:18,0:18:39.13:0,39,539	0/0:38,0:37:99:0,105,1440	0/0:22,0:21:24.68:0,25,525	0/0:16,0:16:44.17:0,44,585	0/1:19,5:24:28.09:212,0,28	1/1:5,7:13:0.76:81,1,0	0/0:18,0:18:46.70:0,47,632	0/1:10,11:22:18.28:328,0,18	0/0:26,0:25:68.79:0,69,867	0/0:24,0:22:69.23:0,69,968	0/0:18,0:18:48.16:0,48,679	0/0:35,0:35:74.28:0,74,1131	1/1:7,0:18:23.99:207,24,0	0/0:15,0:14:26.47:0,26,341	0/0:19,0:19:54.06:0,54,698	0/0:38,0:38:83.66:0,84,1130	0/0:18,0:18:36.10:0,36,490	0/1:7,2:9:29.09:113,0,29	0/1:14,13:27:89.92:355,0,90	0/0:11,0:11:30.03:0,30,353	0/1:1,1:18:25.85:26,0,49	0/0:17,0:17:46.61:0,47,653	0/0:0,0:1:0.89:0,1,2
chr10	72137988	.	ACG	A	1614.64	PASS	AB=0.976;AC=16;AF=0.286;AN=56;BaseQRankSum=6.476;DP=562;FS=1.374;HRun=0;HaplotypeScore=85.8952;InbreedingCoeff=0.3400;MQ=60.08;MQ0=9;MQRankSum=1.411;QD=7.99;ReadPosRankSum=0.296;VQSLOD=3.1510;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:39:36.11:548,36,0	0/1:7,1:8:29.82:30,0,182	0/0:17,0:3:3:0,3,26	0/0:11,0:2:1.19:0,1,3	0/0:15,0:15:7.18:0,7,430	0/0:19,0:19:28.03:0,28,409	0/0:37,0:36:58.44:0,58,1230	0/0:23,0:22:18.38:0,18,378	0/0:15,0:15:12.69:0,13,476	1/1:25,1:26:2.80:410,3,0	0/1:11,0:11:16.96:17,0,18	0/0:19,0:19:41.95:0,42,584	1/1:22,1:23:1.16:190,1,0	0/0:25,0:24:11.01:0,11,634	0/0:24,0:22:35.48:0,35,891	0/0:17,0:17:26.30:0,26,617	0/0:38,0:38:50.43:0,50,1203	0/1:19,0:18:1.40:38,0,1	0/0:13,0:12:7.83:0,8,297	0/1:19,0:19:17.09:17,0,457	0/0:39,0:39:38.65:0,39,827	0/0:16,0:16:25.15:0,25,546	0/1:9,0:9:29.68:63,0,30	0/1:28,1:28:99:144,0,105	0/0:13,0:13:18.39:0,18,319	1/1:18,0:18:38.85:302,39,0	0/0:18,0:18:37.56:0,38,774	1/1:1,0:1:2.99:23,3,0
chr10	72137990	.	GCA	G	801.48	PASS	AB=0.911;AC=20;AF=0.385;AN=52;BaseQRankSum=4.823;DP=575;FS=4.987;HRun=0;HaplotypeScore=89.3215;InbreedingCoeff=-0.3230;MQ=58.65;MQ0=11;MQRankSum=2.841;QD=2.09;ReadPosRankSum=1.372;VQSLOD=1.5786;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:41:14.83:233,15,0	0/1:8,0:8:14.89:15,0,124	./.	./.	0/1:15,1:16:66.67:67,0,303	0/1:16,3:20:23.73:24,0,218	0/1:34,4:37:67.77:68,0,749	0/0:18,0:20:20.58:0,21,195	0/1:16,0:16:61.13:61,0,289	0/0:29,0:28:19.46:0,19,314	0/0:12,0:12:8.73:0,9,93	0/1:16,2:19:3.43:3,0,335	0/0:24,0:24:4.43:0,4,229	0/1:20,2:22:86.68:87,0,357	0/1:22,3:23:46.40:46,0,598	0/1:14,3:17:33.89:34,0,374	0/1:34,2:37:25.55:26,0,862	0/0:21,0:20:32.82:0,33,272	0/1:12,0:11:18.46:18,0,167	0/1:17,4:21:94.88:95,0,320	0/1:35,5:40:49.44:49,0,509	0/1:14,3:17:0.42:0,0,401	0/0:10,0:10:7.13:0,7,200	0/0:29,0:28:30.86:0,31,528	0/1:10,2:12:9.59:10,0,256	0/1:18,0:18:24.34:103,0,24	0/0:16,1:18:11.62:0,12,576	1/1:1,0:1:2.88:15,3,0
chr10	72138626	.	T	TA	616.26	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.134;DP=611;FS=4.771;HRun=10;HaplotypeScore=60.4389;InbreedingCoeff=0.8720;MQ=62.16;MQ0=5;MQRankSum=1.082;QD=19.26;ReadPosRankSum=0.840;VQSLOD=4.6456;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,28:32:47.56:711,48,0	0/0:8,0:8:20.97:0,21,172	0/0:21,0:11:23.40:0,23,159	0/0:22,0:12:17.82:0,18,143	0/0:27,2:29:13.89:0,14,519	0/0:25,0:25:68.85:0,69,558	0/0:19,0:17:38.93:0,39,320	0/0:34,0:31:76.88:0,77,614	0/0:17,0:17:47.89:0,48,384	0/0:29,0:29:65.82:0,66,530	0/0:24,0:24:68.90:0,69,562	0/0:12,0:13:5.94:0,6,198	0/0:16,0:16:44.93:0,45,366	0/0:15,0:16:40.94:0,41,317	0/0:24,0:24:68.87:0,69,560	0/0:14,0:14:32.96:0,33,271	0/0:32,0:31:77.89:0,78,640	0/0:32,0:32:77.90:0,78,640	0/0:21,0:16:35.88:0,36,286	0/0:21,0:21:36.07:0,36,394	0/0:16,0:16:32.94:0,33,269	0/0:13,0:13:21.52:0,22,233	0/0:32,0:31:61.93:0,62,551	0/0:13,0:13:38.96:0,39,320	0/0:21,0:21:53.91:0,54,440	0/0:25,0:25:64.73:0,65,521	0/0:27,0:27:68.87:0,69,563	0/0:14,0:14:38.96:0,39,320
chr10	72139035	.	G	GA	2860.04	PASS	AB=0.957;AC=18;AF=0.321;AN=56;BaseQRankSum=-3.716;DP=608;FS=0.000;HRun=11;HaplotypeScore=66.9683;InbreedingCoeff=0.6222;MQ=64.55;MQ0=0;MQRankSum=0.924;QD=12.43;ReadPosRankSum=0.204;VQSLOD=3.3511;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:29:51.13:257,51,0	0/0:14,0:14:29.83:0,30,232	0/1:12,0:12:22.40:22,0,90	0/1:8,0:6:17.23:24,0,17	0/0:34,2:37:46.22:0,46,530	0/0:25,2:27:41.27:0,41,501	0/1:9,1:11:13.39:13,0,100	0/0:28,0:33:58.77:0,59,417	0/0:25,0:26:49.79:0,50,377	1/1:8,23:33:65.26:685,65,0	1/1:11,14:26:47.69:497,48,0	0/0:15,0:16:34.88:0,35,261	1/1:5,16:21:24.86:434,25,0	0/0:24,0:24:62.74:0,63,487	0/0:26,0:26:65.71:0,66,509	0/0:14,1:17:12.48:0,12,260	0/0:14,0:14:38.83:0,39,302	1/1:4,14:18:36.07:365,36,0	0/0:14,0:14:32.79:0,33,253	0/0:27,2:30:6.84:0,7,409	0/0:16,0:16:41.81:0,42,325	0/0:22,0:22:47.78:0,48,371	1/1:10,19:29:16.73:344,17,0	1/1:4,17:21:39.08:396,39,0	0/0:15,1:18:4.44:0,4,208	0/0:24,1:28:27.94:0,28,455	0/1:19,2:20:22.02:22,0,216	0/0:13,1:16:4.44:0,4,208
chr10	72139274	.	GA	G	1549.46	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.623;DP=643;FS=9.875;HRun=9;HaplotypeScore=70.1385;InbreedingCoeff=0.9802;MQ=77.72;MQ0=0;MQRankSum=0.594;QD=13.02;ReadPosRankSum=1.178;VQSLOD=2.5491;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.21:0,72,831	0/0:9,0:9:24.07:0,24,277	0/0:19,1:20:8.35:0,8,302	0/0:12,0:12:18.67:0,19,192	0/0:32,0:32:84.24:0,84,956	0/0:35,0:35:90.24:0,90,1012	0/0:23,0:23:51.15:0,51,588	0/0:29,0:29:84.22:0,84,938	0/0:18,0:18:51.15:0,51,589	1/1:4,0:34:56.41:165,56,0	1/1:3,0:26:44.81:132,45,0	0/0:17,0:17:45.09:0,45,504	1/1:1,18:19:47.92:439,48,0	0/0:22,0:22:60.17:0,60,682	0/0:32,0:32:90.27:0,90,1039	0/0:25,0:25:60.18:0,60,692	0/0:31,0:31:90.22:0,90,1006	0/0:9,0:9:18.05:0,18,208	0/0:16,0:16:42.10:0,42,461	0/0:36,0:36:91.50:0,92,1154	0/0:16,0:16:36.09:0,36,406	0/0:22,0:22:60.18:0,60,688	1/1:1,24:25:69.04:632,69,0	1/1:2,13:15:39.02:357,39,0	0/0:15,0:15:45.13:0,45,519	0/0:29,0:30:71.27:0,71,860	0/0:31,0:30:90.27:0,90,1038	0/0:16,0:16:24.07:0,24,276
chr10	72140292	.	G	GA	2787.49	PASS	AB=0.812;AC=15;AF=0.268;AN=56;BaseQRankSum=-3.273;DP=585;FS=0.877;HRun=9;HaplotypeScore=67.9415;InbreedingCoeff=0.7791;MQ=84.20;MQ0=0;MQRankSum=-0.712;QD=15.15;ReadPosRankSum=1.717;VQSLOD=3.9130;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:22:39.08:466,39,0	0/0:9,0:9:20.98:0,21,182	0/1:38,0:30:4.77:5,0,278	0/0:32,0:25:41.38:0,41,315	0/0:35,0:35:80.90:0,81,692	0/0:25,0:25:74.97:0,75,647	0/0:14,0:14:32.99:0,33,286	0/0:28,0:28:44.15:0,44,542	0/0:19,0:19:47.96:0,48,410	1/1:7,17:24:48.12:521,48,0	1/1:5,15:20:39.10:429,39,0	0/0:14,0:14:26.96:0,27,229	0/1:7,17:24:0.96:447,0,1	0/0:21,0:21:56.96:0,57,490	0/0:16,0:16:35.99:0,36,312	0/0:12,0:12:26.96:0,27,230	0/0:18,0:18:50.99:0,51,442	1/1:2,13:15:36.10:398,36,0	0/0:30,0:30:53.89:0,54,454	0/1:12,2:14:30.42:30,0,217	0/0:21,0:21:11.86:0,12,323	0/0:14,0:14:26.96:0,27,229	1/1:2,20:22:51.10:549,51,0	1/1:0,4:4:12.03:133,12,0	0/0:29,0:28:68.97:0,69,596	0/0:30,1:31:29.73:0,30,480	0/0:20,0:20:21.50:0,22,333	0/0:13,0:13:38.97:0,39,333
chr10	72140771	.	ACTGTTTCTT	A	2470.37	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.907;DP=630;FS=4.456;HRun=0;HaplotypeScore=175.2188;InbreedingCoeff=0.9687;MQ=74.59;MQ0=0;MQRankSum=-8.741;QD=63.34;ReadPosRankSum=-1.654;VQSLOD=2.9014;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,36:39:90.31:2565,90,0	0/0:11,0:11:33.11:0,33,1485	0/0:17,0:17:15.60:0,16,1030	0/0:11,0:11:24.08:0,24,804	0/0:16,0:16:45.15:0,45,2007	0/0:27,0:27:78.27:0,78,3397	0/0:24,0:24:66.23:0,66,3096	0/0:29,0:29:84.28:0,84,3172	0/0:17,0:17:51.16:0,51,2108	0/0:33,0:33:96.33:0,96,4546	0/0:13,0:13:39.13:0,39,1876	0/0:20,0:20:60.19:0,60,2556	0/0:19,0:19:54.19:0,54,2489	0/0:26,0:26:72.25:0,72,3198	0/0:25,0:25:75.25:0,75,3124	0/0:19,0:19:57.18:0,57,2400	0/0:31,0:31:81.28:0,81,3767	0/0:15,0:15:42.14:0,42,1911	0/0:17,0:17:48.16:0,48,1979	0/0:14,0:14:39.13:0,39,1877	0/0:59,0:59:99:0,169,7319	0/0:16,0:16:42.14:0,42,2028	0/0:12,0:12:36.12:0,36,1714	0/0:42,0:42:99:0,117,5192	0/0:19,0:19:48.16:0,48,2318	0/0:19,0:19:48.16:0,48,2134	0/0:35,0:35:99:0,102,4788	0/0:5,0:5:15.05:0,15,725
chr10	72141242	.	A	ATC	4131.11	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=12.039;DP=429;FS=6.498;HRun=0;HaplotypeScore=71.2596;InbreedingCoeff=0.6637;MQ=58.07;MQ0=5;MQRankSum=-4.015;QD=30.15;ReadPosRankSum=2.126;VQSLOD=5.3117;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,9:31:66.23:1199,66,0	0/0:7,0:7:21.04:0,21,278	0/0:5,0:4:8.70:0,9,98	0/0:4,0:4:9.03:0,9,137	0/0:36,0:35:99:0,102,1514	0/0:24,0:24:60.15:0,60,756	0/0:4,0:4:8.99:0,9,92	0/0:36,0:34:99:0,99,1449	0/0:5,0:5:15.05:0,15,225	1/1:24,0:27:81.23:1221,81,0	1/1:16,0:17:45.15:696,45,0	0/0:8,0:8:24.08:0,24,367	1/1:11,0:11:30.10:466,30,0	0/0:14,0:14:42.11:0,42,582	0/0:10,0:10:27.09:0,27,413	0/0:8,0:8:21.07:0,21,322	0/0:30,0:30:78.22:0,78,1143	0/0:18,0:17:36.06:0,36,452	0/0:14,0:12:33.11:0,33,496	0/1:14,0:14:6.62:7,0,554	0/0:8,0:8:18.06:0,18,263	0/0:3,0:3:6.02:0,6,92	1/1:8,0:10:27.09:429,27,0	0/1:4,0:4:36.84:85,0,37	0/0:17,0:17:51.17:0,51,779	0/1:22,0:21:28.14:28,0,739	0/0:28,0:28:81.21:0,81,1186	0/0:12,0:12:36.12:0,36,551
chr10	72141243	.	T	TC	3019.79	PASS	AB=0.818;AC=13;AF=0.232;AN=56;BaseQRankSum=13.357;DP=423;FS=4.891;HRun=0;HaplotypeScore=64.2553;InbreedingCoeff=0.6761;MQ=58.44;MQ0=5;MQRankSum=-4.507;QD=22.88;ReadPosRankSum=2.534;VQSLOD=4.8820;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,19:29:57.01:584,57,0	0/0:7,0:7:21.04:0,21,270	0/0:6,0:4:8.63:0,9,72	0/0:4,0:4:9.03:0,9,125	0/0:36,0:35:99:0,102,1347	0/0:24,0:24:59.37:0,59,533	0/0:4,0:4:8.63:0,9,54	0/0:37,0:35:99:0,99,1339	0/0:5,0:5:15.04:0,15,194	1/1:6,22:27:74.80:1049,75,0	1/1:1,14:15:42.14:617,42,0	0/0:8,0:8:24.08:0,24,330	1/1:0,11:11:30.10:453,30,0	0/0:14,0:14:42.12:0,42,554	0/0:10,0:10:27.09:0,27,377	0/0:7,0:7:21.07:0,21,293	0/0:30,0:30:78.25:0,78,1062	0/0:18,0:17:35.92:0,36,344	0/0:13,0:11:33.11:0,33,455	0/1:13,1:14:2.84:3,0,496	0/0:8,0:8:18.04:0,18,233	0/0:3,0:3:6.02:0,6,84	1/1:2,7:9:27.08:377,27,0	0/1:1,2:3:32.81:83,0,33	0/0:17,0:17:51.17:0,51,709	0/1:21,2:22:33.61:34,0,663	0/0:28,0:28:84.26:0,84,1138	0/0:12,0:12:36.12:0,36,503
chr10	72141245	.	T	TA	967.36	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=2.339;DP=424;FS=7.771;HRun=12;HaplotypeScore=70.1152;InbreedingCoeff=0.5849;MQ=58.57;MQ0=5;MQRankSum=-4.657;QD=7.01;ReadPosRankSum=-0.805;VQSLOD=1.8864;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:29:56.92:453,57,0	0/0:7,0:7:17.88:0,18,130	0/0:6,0:4:11.17:0,11,65	0/0:4,0:4:8.94:0,9,65	0/0:35,1:35:27.88:0,28,516	1/1:6,17:23:20.16:358,20,0	1/1:2,3:5:9.01:85,9,0	0/0:35,1:36:57.51:0,58,565	0/0:5,0:5:8.91:0,9,63	0/1:28,0:27:8.45:8,0,48	0/1:15,0:15:13.23:28,0,13	0/0:9,0:9:17.86:0,18,131	0/1:11,0:11:1.31:21,0,1	0/0:12,0:12:35.80:0,36,263	0/0:10,0:10:23.75:0,24,169	0/0:7,0:7:17.89:0,18,131	0/0:29,0:29:68.48:0,68,503	1/1:5,13:17:18.03:175,18,0	0/0:12,0:11:28.88:0,29,203	0/0:15,0:15:25.60:0,26,180	0/0:8,0:8:14.79:0,15,108	0/0:4,0:4:8.94:0,9,65	0/1:9,0:9:4.15:4,0,10	0/0:3,0:3:1.58:0,2,22	0/0:18,0:18:38.70:0,39,281	0/0:21,0:22:28.18:0,28,253	0/0:28,0:28:67.64:0,68,486	0/0:12,0:12:35.80:0,36,263
chr10	72142275	.	T	TA	810.29	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.539;DP=497;FS=2.568;HRun=2;HaplotypeScore=61.4352;InbreedingCoeff=0.7064;MQ=64.21;MQ0=11;MQRankSum=-0.484;QD=14.22;ReadPosRankSum=1.816;VQSLOD=3.2099;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,39:43:74.75:905,75,0	0/0:3,0:3:9:0,9,95	0/0:14,0:8:15.02:0,15,148	0/1:13,0:7:1.49:1,0,5	0/0:21,0:21:60.05:0,60,647	0/0:24,0:23:60.02:0,60,672	0/0:12,0:11:32.96:0,33,332	0/0:30,0:30:74.18:0,74,854	0/0:22,0:21:52.85:0,53,555	0/0:11,0:11:23.09:0,23,130	0/0:13,0:13:12.33:0,12,83	0/0:19,0:18:49.19:0,49,532	0/0:11,0:11:21.59:0,22,114	0/0:15,0:15:39.05:0,39,413	0/0:18,0:18:49:0,49,549	0/0:16,0:16:45.07:0,45,480	0/0:27,0:27:65.89:0,66,749	0/0:29,0:27:62.67:0,63,742	0/0:19,0:17:45.09:0,45,499	0/0:23,0:22:57.02:0,57,607	0/0:19,0:19:46.92:0,47,479	0/0:12,0:12:32.90:0,33,316	0/0:6,0:6:7.05:0,7,39	0/0:13,0:13:24.59:0,25,160	0/0:16,0:16:39:0,39,423	0/0:11,0:11:30.02:0,30,329	0/0:30,0:30:62.59:0,63,632	0/0:6,0:5:15.03:0,15,171
chr10	72143050	.	T	TC	6664.64	PASS	AB=0.733;AC=52;AF=0.963;AN=54;BaseQRankSum=-4.315;DP=204;FS=32.910;HRun=2;HaplotypeScore=26.3506;InbreedingCoeff=-0.0734;MQ=74.04;MQ0=0;MQRankSum=-2.531;QD=32.67;ReadPosRankSum=3.463;VQSLOD=2.5213;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:14:36.11:499,36,0	1/1:0,1:1:3.01:43,3,0	0/1:5,5:9:41.67:177,0,42	0/1:3,1:4:31.23:31,0,71	1/1:0,3:3:9.03:129,9,0	1/1:0,8:8:18.06:259,18,0	1/1:2,9:11:6.10:203,6,0	1/1:1,13:14:39.13:561,39,0	1/1:0,4:4:9.03:128,9,0	1/1:1,13:14:39.11:537,39,0	1/1:1,6:7:18.06:259,18,0	1/1:0,6:6:18.06:259,18,0	1/1:3,8:11:26.58:352,27,0	1/1:0,5:5:9.03:129,9,0	1/1:0,3:3:6.02:86,6,0	1/1:0,4:4:12.04:173,12,0	1/1:0,7:7:12.04:172,12,0	1/1:0,3:3:6.02:86,6,0	1/1:0,6:6:18.06:259,18,0	1/1:0,13:13:36.12:510,36,0	1/1:4,15:19:41.22:636,41,0	1/1:0,6:6:12.04:172,12,0	1/1:0,6:6:11.95:146,12,0	1/1:1,7:8:12.04:173,12,0	./.	1/1:0,6:6:18.06:255,18,0	1/1:0,6:6:18.06:257,18,0	1/1:1,4:5:12.04:173,12,0
chr10	72143568	.	A	ACACGCATG	7985.46	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-3.944;DP=784;FS=4.693;HRun=0;HaplotypeScore=206.4886;InbreedingCoeff=0.9838;MQ=67.74;MQ0=0;MQRankSum=-11.797;QD=41.59;ReadPosRankSum=-0.911;VQSLOD=4.0846;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:12.96:501,13,0	0/0:10,0:10:27.08:0,27,658	0/0:27,0:25:62.95:0,63,955	0/0:27,0:26:54.96:0,55,980	0/0:26,0:26:60.13:0,60,1433	0/0:31,0:31:75.23:0,75,1868	0/0:35,0:35:78.16:0,78,1777	0/0:23,0:23:21.96:0,22,643	0/0:30,0:30:75.18:0,75,1653	1/1:4,26:37:93.08:2990,93,0	1/1:2,22:27:24.08:1011,24,0	0/0:36,0:36:99:0,99,2209	1/1:11,19:35:39.13:1644,39,0	0/0:34,0:34:81.25:0,81,2027	0/0:28,0:28:66.17:0,66,1525	0/0:35,0:35:90.29:0,90,2266	0/0:36,0:36:75.23:0,75,1861	0/0:22,0:22:57.17:0,57,1412	0/0:21,0:21:36.07:0,36,610	0/0:18,0:18:42.13:0,42,944	0/0:48,0:48:99:0,117,2611	0/0:25,0:25:66.14:0,66,1414	1/1:4,19:26:33.11:1367,33,0	1/1:10,13:32:14.73:472,15,0	0/0:26,0:26:66.15:0,66,1415	0/0:24,0:24:34.19:0,34,1293	0/0:24,0:24:57.11:0,57,1177	0/0:5,0:5:12.04:0,12,283
chr10	72144736	.	A	AT	4299.98	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.268;DP=539;FS=0.000;HRun=6;HaplotypeScore=71.0616;InbreedingCoeff=0.9927;MQ=69.05;MQ0=0;MQRankSum=-0.488;QD=32.58;ReadPosRankSum=-1.471;VQSLOD=4.4213;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:51.16:640,51,0	0/0:12,0:12:36.08:0,36,367	0/0:8,0:7:14.75:0,15,136	0/0:7,0:7:21.04:0,21,210	0/0:29,0:29:81.18:0,81,826	0/0:19,0:19:51.12:0,51,520	0/0:9,0:9:21.03:0,21,207	0/0:32,0:32:84.17:0,84,847	0/0:17,0:17:48.11:0,48,490	1/1:1,25:26:78.23:961,78,0	1/1:1,20:21:54.13:661,54,0	0/0:32,0:32:90.20:0,90,918	1/1:1,14:15:36.12:453,36,0	0/0:22,0:22:54.12:0,54,550	0/0:22,0:22:63.12:0,63,635	0/0:20,0:20:54.12:0,54,549	0/0:29,0:29:84.19:0,84,857	1/1:3,13:16:39.12:491,39,0	0/0:29,0:29:75.01:0,75,737	0/0:31,0:31:84.19:0,84,857	0/0:12,0:12:30.07:0,30,306	0/0:9,0:9:24.04:0,24,237	1/1:2,16:18:48.15:604,48,0	1/1:2,14:16:39.12:491,39,0	0/0:19,0:19:51.11:0,51,520	0/0:19,1:20:16.38:0,16,483	0/0:18,0:18:48.11:0,48,490	0/0:11,0:11:33.08:0,33,337
chr10	72144757	.	TA	T	269.59	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.950;DP=556;FS=0.000;HRun=10;HaplotypeScore=82.4721;InbreedingCoeff=0.9357;MQ=70.74;MQ0=0;MQRankSum=-3.166;QD=12.25;ReadPosRankSum=0.141;VQSLOD=3.3695;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,17:22:41.97:364,42,0	0/0:10,0:10:21.06:0,21,232	0/0:13,0:12:26.16:0,26,251	0/0:7,0:6:9.02:0,9,92	0/0:36,2:39:52.48:0,52,990	0/0:20,0:20:51.98:0,52,550	0/0:11,0:11:33.09:0,33,365	0/0:34,0:34:72.11:0,72,780	0/0:16,0:16:42.11:0,42,464	0/0:20,0:20:39.07:0,39,419	0/0:25,0:25:66.17:0,66,723	0/0:29,1:30:37.11:0,37,638	0/0:17,0:17:39.11:0,39,431	0/0:21,0:21:57.15:0,57,629	0/0:27,1:29:54.94:0,55,804	0/0:20,0:20:51.14:0,51,564	0/0:25,0:25:65.91:0,66,707	0/0:13,0:13:36.03:0,36,373	0/0:24,1:25:45.73:0,46,714	0/0:31,0:31:78.21:0,78,863	0/0:18,0:19:54.12:0,54,581	0/0:11,0:11:23.65:0,24,243	0/0:20,0:20:51.12:0,51,555	0/0:15,0:15:36.10:0,36,398	0/0:18,0:18:48.13:0,48,531	0/0:18,0:18:48.11:0,48,522	0/0:16,0:16:33.09:0,33,365	0/0:11,0:11:24.06:0,24,262
chr10	72145111	.	T	TG	6663.42	PASS	AB=0.535;AC=11;AF=0.196;AN=56;BaseQRankSum=-12.312;DP=677;FS=2.981;HRun=0;HaplotypeScore=64.9732;InbreedingCoeff=0.8866;MQ=86.52;MQ0=0;MQRankSum=-3.542;QD=42.99;ReadPosRankSum=2.520;VQSLOD=5.5355;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:72.25:1151,72,0	0/0:11,0:11:33.11:0,33,461	0/0:16,0:16:48.16:0,48,658	0/0:29,0:29:73.71:0,74,950	0/0:42,0:42:99:0,126,1745	0/0:20,0:20:60.20:0,60,837	0/0:14,0:14:42.14:0,42,587	0/0:40,0:40:99:0,120,1638	0/0:25,0:25:75.24:0,75,1024	1/1:0,27:27:78.27:1248,78,0	1/1:0,32:32:87.29:1361,87,0	0/0:25,0:25:75.25:0,75,1048	1/1:0,26:26:75.26:1199,75,0	0/0:19,0:19:57.19:0,57,795	0/0:31,0:31:90.28:0,90,1227	0/0:27,0:27:81.26:0,81,1118	0/0:18,0:18:54.18:0,54,755	0/0:24,0:24:69.21:0,69,945	0/0:28,0:28:78.26:0,78,1089	0/0:37,0:37:99:0,108,1491	0/0:17,0:17:51.17:0,51,713	0/0:21,0:21:60.19:0,60,824	1/1:0,20:20:50.91:814,51,0	0/1:3,20:23:54.53:890,0,55	0/0:11,0:11:33.11:0,33,462	0/0:25,1:26:30.28:0,30,997	0/0:30,0:30:90.30:0,90,1257	0/0:11,0:11:33.11:0,33,462
chr10	72145412	.	C	CA	1185.67	PASS	AB=0.565;AC=3;AF=0.054;AN=56;BaseQRankSum=-7.741;DP=695;FS=0.619;HRun=7;HaplotypeScore=92.7113;InbreedingCoeff=0.8136;MQ=74.46;MQ0=0;MQRankSum=-0.718;QD=22.37;ReadPosRankSum=-0.385;VQSLOD=3.0161;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:90.10:0,90,861	0/0:8,0:8:15.01:0,15,145	0/0:25,0:22:43.76:0,44,392	0/0:14,0:14:42.06:0,42,399	0/0:41,0:41:99:0,111,1039	0/0:32,0:32:89.84:0,90,839	0/0:20,0:20:48.07:0,48,464	0/0:32,0:32:87.10:0,87,827	0/0:22,0:22:60.09:0,60,577	0/0:27,0:27:66.10:0,66,637	0/0:26,0:27:68.13:0,68,639	0/0:22,0:22:54.03:0,54,508	0/0:31,0:31:75.12:0,75,724	0/0:26,0:26:72.11:0,72,695	0/0:32,0:32:87.06:0,87,820	0/0:27,0:27:75.12:0,75,724	0/0:12,0:12:33.02:0,33,311	0/0:11,0:11:30.05:0,30,290	0/0:17,0:17:45.02:0,45,421	0/0:27,0:27:72.11:0,72,695	0/0:31,0:31:78.10:0,78,745	0/0:26,0:26:66.08:0,66,629	0/0:25,0:25:56.99:0,57,530	0/0:14,0:14:30.05:0,30,289	0/0:18,0:18:27:0,27,249	1/1:9,31:40:38.35:1029,38,0	0/0:31,0:31:81.12:0,81,779	0/1:3,10:13:1.23:263,0,1
chr10	72145440	.	GTTCATTCATTCA	G	5495.19	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.992;DP=706;FS=1.031;HRun=0;HaplotypeScore=239.8858;InbreedingCoeff=0.9470;MQ=63.86;MQ0=1;MQRankSum=-7.904;QD=30.53;ReadPosRankSum=1.268;VQSLOD=4.2686;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,24:42:36.12:1191,36,0	0/0:14,0:14:39.13:0,39,2117	0/0:24,0:20:21.07:0,21,868	0/0:22,0:21:29.49:0,29,1809	0/0:35,0:35:72.25:0,72,3498	0/0:29,0:29:66.23:0,66,3501	0/0:23,0:23:51.18:0,51,2645	0/0:39,0:39:66.22:0,66,2790	0/0:23,0:23:60.21:0,60,3434	1/1:15,17:32:38.14:1102,38,0	1/1:11,17:28:30.10:774,30,0	0/0:24,0:24:63.22:0,63,3580	1/1:9,19:28:36.12:1257,36,0	0/0:21,0:21:48.16:0,48,2701	0/0:30,0:30:63.22:0,63,3512	0/0:30,0:30:69.24:0,69,3905	0/0:17,0:17:42.12:0,42,2102	1/1:3,0:14:6.23:16,6,0	0/0:26,0:26:36.11:0,36,1139	0/0:28,0:28:66.23:0,66,3384	0/0:23,0:23:57.20:0,57,3012	0/0:26,0:26:63.22:0,63,3289	1/1:3,19:22:28.39:1050,28,0	1/1:6,8:14:3.01:104,3,0	0/0:3,0:16:24.08:0,24,620	0/0:37,0:37:93.32:0,93,4998	0/0:27,0:27:69.24:0,69,3436	0/0:12,0:12:24.55:0,25,1422
chr10	72145972	.	TAATA	T	583.95	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=5.214;DP=356;FS=10.822;HRun=0;HaplotypeScore=48.5751;InbreedingCoeff=0.6045;MQ=53.84;MQ0=20;MQRankSum=0.267;QD=25.39;ReadPosRankSum=2.244;VQSLOD=1.6941;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:39.13:678,39,0	0/0:8,0:8:15.05:0,15,381	./.	0/0:13,0:3:6.91:0,7,150	0/0:21,0:21:42.14:0,42,1053	0/0:23,0:22:39.13:0,39,990	0/0:10,0:9:21.07:0,21,524	0/0:31,0:29:63.22:0,63,1543	0/0:9,0:9:12.04:0,12,300	0/0:15,0:15:21.07:0,21,534	0/0:15,0:15:33.11:0,33,833	0/0:6,0:6:6.02:0,6,152	0/0:6,0:6:9.03:0,9,228	0/0:10,0:10:12.04:0,12,305	0/0:11,0:11:24.08:0,24,609	0/0:5,0:5:9.03:0,9,228	0/0:21,0:21:39.13:0,39,986	0/0:20,0:20:51.18:0,51,1260	0/0:14,0:12:21.07:0,21,473	0/0:10,0:10:27.09:0,27,672	0/0:7,0:7:15.05:0,15,368	0/0:4,0:4:9.03:0,9,222	0/0:7,0:7:12.04:0,12,304	0/0:3,0:3:6.02:0,6,152	0/0:12,0:12:21.07:0,21,534	0/0:17,0:17:39.12:0,39,924	0/0:17,0:17:36.12:0,36,841	0/0:9,0:9:21.07:0,21,528
chr10	72147045	.	G	GA	180.67	PASS	AB=0.833;AC=3;AF=0.054;AN=56;BaseQRankSum=5.836;DP=509;FS=0.000;HRun=11;HaplotypeScore=69.2268;InbreedingCoeff=0.5724;MQ=76.60;MQ0=4;MQRankSum=1.590;QD=5.02;ReadPosRankSum=-0.551;VQSLOD=1.2699;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:59.91:265,60,0	0/1:4,1:5:21.48:21,0,37	0/0:44,0:25:23.96:0,24,197	0/0:39,1:20:17.05:0,17,107	0/0:21,0:21:32.42:0,32,434	0/0:9,0:9:23.91:0,24,186	0/0:22,1:24:22.38:0,22,345	0/0:22,1:24:28.07:0,28,344	0/0:8,0:8:17.88:0,18,134	0/0:20,0:21:49.71:0,50,369	0/0:22,0:22:53.63:0,54,401	0/0:14,0:14:25.92:0,26,192	0/0:8,0:8:11.94:0,12,93	0/0:11,0:11:26.85:0,27,204	0/0:12,0:12:20.91:0,21,162	0/0:11,0:11:32.87:0,33,254	0/0:26,0:26:60.64:0,61,465	0/0:20,0:20:43.97:0,44,223	0/0:13,1:15:10.09:0,10,213	0/0:22,3:24:28.93:0,29,397	0/0:11,0:11:26.77:0,27,199	0/0:19,0:19:38.68:0,39,302	0/0:21,0:21:56.39:0,56,426	0/0:15,0:15:38.83:0,39,298	0/0:13,0:13:26.87:0,27,207	0/0:15,0:15:34.88:0,35,258	0/0:16,0:15:8.48:0,8,245	0/0:7,0:7:20.92:0,21,162
chr10	72147051	.	A	AAAC	1295.87	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.051;DP=510;FS=1.557;HRun=0;HaplotypeScore=83.3577;InbreedingCoeff=0.7794;MQ=77.84;MQ0=7;MQRankSum=1.723;QD=44.69;ReadPosRankSum=0.226;VQSLOD=5.2867;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:69.23:1390,69,0	0/0:6,0:6:14.82:0,15,163	0/0:44,0:22:0.83:0,1,481	0/0:47,0:21:23.61:0,24,307	0/0:21,0:21:63:0,63,970	0/0:9,0:9:24.08:0,24,385	0/0:21,0:21:53.97:0,54,810	0/0:22,0:21:60.64:0,61,868	0/0:8,0:8:18.06:0,18,286	0/0:19,0:19:54.17:0,54,818	0/0:22,0:22:57.18:0,57,875	0/0:12,0:12:33.09:0,33,465	0/0:8,0:8:21.04:0,21,272	0/0:12,0:12:33.08:0,33,477	0/0:9,0:9:21.07:0,21,336	0/0:13,0:13:39.12:0,39,581	0/0:26,0:26:75.18:0,75,1082	0/0:20,0:20:60.16:0,60,872	0/0:16,0:16:48.04:0,48,624	0/0:22,0:21:62.96:0,63,927	0/0:11,0:11:30.08:0,30,434	0/0:20,0:20:48.14:0,48,723	0/0:21,0:21:60.20:0,60,922	0/0:14,0:14:42.13:0,42,634	0/0:12,0:12:36.09:0,36,508	0/0:17,0:17:45.13:0,45,639	0/0:20,0:19:53.89:0,54,713	0/0:8,0:8:21.07:0,21,336
chr10	72147057	.	C	CA	560.79	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=0.517;DP=521;FS=0.788;HRun=11;HaplotypeScore=70.6470;InbreedingCoeff=0.6718;MQ=75.79;MQ0=13;MQRankSum=0.298;QD=7.68;ReadPosRankSum=-2.065;VQSLOD=1.8665;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:54.16:0,54,558	0/0:4,0:4:11.93:0,12,113	0/0:48,0:20:7.83:0,8,172	0/1:51,0:21:2.34:2,0,143	0/0:21,0:21:57.07:0,57,591	0/0:9,0:9:27.07:0,27,290	0/0:23,0:21:60.09:0,60,617	0/0:24,0:23:60.11:0,60,619	0/0:8,0:8:21:0,21,212	0/0:19,0:18:49.36:0,49,372	0/0:19,0:19:46.90:0,47,344	0/0:10,0:10:27.05:0,27,282	0/0:11,0:11:12.73:0,13,126	0/0:12,0:12:30.07:0,30,322	0/0:10,0:10:27.07:0,27,289	0/0:14,0:14:36.09:0,36,386	0/0:26,0:26:60.03:0,60,624	1/1:9,13:22:54.11:655,54,0	0/0:18,0:16:39.07:0,39,411	0/0:22,0:21:51.05:0,51,521	0/0:11,0:10:27.07:0,27,289	0/0:17,0:17:48.12:0,48,515	0/0:24,0:24:51.41:0,51,385	0/0:15,0:15:38.44:0,38,298	0/0:13,0:13:36.07:0,36,376	0/0:15,0:15:42.10:0,42,444	0/0:20,0:19:54.02:0,54,555	0/0:10,0:10:26.99:0,27,264
chr10	72147138	.	GA	G	1302.56	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=9.050;DP=445;FS=9.502;HRun=3;HaplotypeScore=91.6928;InbreedingCoeff=0.7838;MQ=72.27;MQ0=21;MQRankSum=-7.129;QD=12.17;ReadPosRankSum=5.090;VQSLOD=1.3674;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:6:0.46:24,0,0	0/0:4,0:4:10.95:0,11,89	0/0:63,0:14:29.12:0,29,206	0/0:55,0:22:38.22:0,38,286	0/0:17,0:16:35.90:0,36,369	0/0:12,0:12:33.05:0,33,393	0/0:13,0:12:20.54:0,21,238	0/0:19,0:18:48.05:0,48,498	0/0:6,0:5:12.01:0,12,148	1/1:9,2:11:23.97:215,24,0	1/1:13,3:16:35.71:297,36,0	0/0:13,0:13:35.14:0,35,424	1/1:15,1:13:35.93:309,36,0	0/0:10,0:10:23.96:0,24,255	0/0:17,0:13:36.11:0,36,487	0/0:5,0:5:14.96:0,15,167	0/0:15,0:14:44.85:0,45,477	0/0:12,0:12:15.38:0,15,90	0/0:10,0:10:29.48:0,29,294	0/0:14,0:13:23.77:0,24,257	0/0:14,0:12:27.89:0,28,303	0/0:10,0:9:15.91:0,16,162	1/1:15,1:16:38.91:329,39,0	1/1:16,2:17:35.88:290,36,0	0/0:6,0:5:8.72:0,9,60	0/1:22,0:21:19.19:19,0,143	0/0:12,0:12:32.97:0,33,341	0/0:8,0:7:3.83:0,4,33
chr10	72147139	.	AAAC	A	1444.76	PASS	AB=0.955;AC=10;AF=0.179;AN=56;BaseQRankSum=9.221;DP=454;FS=7.513;HRun=0;HaplotypeScore=103.4824;InbreedingCoeff=0.8199;MQ=71.72;MQ0=23;MQRankSum=-8.619;QD=14.59;ReadPosRankSum=5.255;VQSLOD=2.6862;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:8:15.65:0,16,166	0/0:4,0:4:12.04:0,12,226	0/0:67,0:14:35.40:0,35,466	0/0:58,0:22:40.59:0,41,551	0/0:17,0:16:41.11:0,41,824	0/0:12,0:12:36.12:0,36,804	0/0:14,0:13:21.07:0,21,473	0/0:18,0:18:48.16:0,48,1029	0/0:6,0:5:12.93:0,13,280	0/1:9,1:10:0.94:243,0,1	1/1:12,3:15:26.92:368,27,0	0/0:13,0:13:39.13:0,39,857	1/1:16,0:13:30.43:304,30,0	0/0:10,0:10:24.08:0,24,501	0/0:18,0:14:39.12:0,39,889	0/0:6,0:6:15:0,15,311	0/0:15,0:14:45.15:0,45,944	0/0:12,0:12:23.32:0,23,388	0/0:10,0:10:30.10:0,30,599	0/0:13,0:12:26.57:0,27,520	0/0:14,0:12:30.10:0,30,613	0/0:10,0:9:21.07:0,21,399	1/1:17,0:16:31.55:349,32,0	1/1:18,0:17:33.94:342,34,0	0/0:6,0:5:12.04:0,12,192	0/1:23,0:22:3.92:4,0,676	0/0:12,0:12:36.12:0,36,704	0/0:10,0:9:24.35:0,24,293
chr10	72147140	.	AACC	A	2577.22	PASS	AB=0.977;AC=12;AF=0.214;AN=56;BaseQRankSum=7.724;DP=454;FS=10.407;HRun=0;HaplotypeScore=99.4762;InbreedingCoeff=0.8093;MQ=72.54;MQ0=23;MQRankSum=-7.798;QD=24.54;ReadPosRankSum=4.874;VQSLOD=3.2213;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:9:1.03:1,0,133	0/0:4,0:4:12.02:0,12,183	0/0:69,0:15:29.29:0,29,301	0/0:58,0:22:36.36:0,36,310	0/0:17,0:16:41.80:0,42,797	0/0:12,0:12:36.10:0,36,737	0/0:14,0:13:21.07:0,21,471	0/0:18,0:18:48.11:0,48,923	0/0:6,0:5:14.64:0,15,285	1/1:5,3:8:24.08:400,24,0	1/1:7,7:15:43.75:561,44,0	0/0:13,0:13:39.13:0,39,858	1/1:6,10:13:36.09:551,36,0	0/0:10,0:10:23.99:0,24,424	0/0:18,0:14:39.13:0,39,896	0/0:6,0:6:14.91:0,15,260	0/0:15,0:14:44.99:0,45,837	0/0:12,0:12:29.72:0,30,375	0/0:10,0:10:30.03:0,30,477	0/0:13,0:12:26.74:0,27,498	0/0:14,0:12:30.04:0,30,538	0/0:10,0:9:23.92:0,24,348	1/1:5,11:16:42.03:607,42,0	1/1:7,11:17:35.89:585,36,0	0/0:6,0:5:12.02:0,12,150	0/1:20,1:20:50.23:50,0,507	0/0:13,0:13:36.01:0,36,612	0/0:10,0:9:25.31:0,25,264
chr10	72147141	.	AC	A	809.94	PASS	AB=0.982;AC=21;AF=0.375;AN=56;BaseQRankSum=7.248;DP=464;FS=11.420;HRun=11;HaplotypeScore=95.6698;InbreedingCoeff=0.5898;MQ=71.86;MQ0=25;MQRankSum=-5.061;QD=5.19;ReadPosRankSum=1.796;VQSLOD=0.9364;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:9:12.96:0,13,80	0/1:4,0:4:0.31:0,0,20	0/0:68,5:15:20.96:0,21,120	0/0:58,1:22:4.95:0,5,44	0/0:15,1:15:4.63:0,5,192	0/0:12,0:12:27.03:0,27,263	0/0:14,0:13:2.28:0,2,141	0/0:18,0:18:26.85:0,27,233	0/1:6,0:5:5.88:6,0,74	1/1:8,0:8:18.94:72,19,0	1/1:15,0:15:25.80:111,26,0	0/0:13,0:13:13.05:0,13,258	1/1:16,0:13:23.69:96,24,0	0/0:10,0:10:14.96:0,15,137	0/0:18,0:14:36.01:0,36,343	0/0:6,0:6:8.92:0,9,83	0/0:15,0:14:31.79:0,32,294	1/1:12,0:12:20.02:113,20,0	0/0:11,0:11:1.47:0,1,67	0/1:14,0:13:1.94:2,0,132	0/0:16,0:13:16.81:0,17,130	0/1:9,1:9:10.79:11,0,81	1/1:17,0:16:26.97:102,27,0	1/1:18,0:17:24.72:83,25,0	0/1:5,0:4:10.14:10,0,11	1/1:9,12:20:39.04:263,39,0	0/0:13,0:13:20.07:0,20,140	1/1:8,2:9:8.89:133,9,0
chr10	72147150	.	CCCAAA	C	1890.40	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=9.625;DP=497;FS=6.977;HRun=0;HaplotypeScore=113.5131;InbreedingCoeff=0.8324;MQ=61.19;MQ0=30;MQRankSum=-7.787;QD=21.24;ReadPosRankSum=4.106;VQSLOD=2.8067;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:8:11.28:0,11,189	0/0:3,0:3:6.02:0,6,101	0/0:88,0:15:36.78:0,37,472	0/0:77,0:18:10.02:0,10,267	0/0:20,0:19:47.73:0,48,1063	0/0:12,0:12:33.10:0,33,825	0/0:14,0:13:27.98:0,28,605	0/0:17,0:17:45.11:0,45,892	0/0:9,0:8:24.06:0,24,456	1/1:7,2:8:23.99:301,24,0	1/1:12,3:15:43.56:554,44,0	0/0:20,0:20:60.19:0,60,1326	1/1:12,1:10:29.84:281,30,0	0/0:9,0:9:23.91:0,24,521	0/0:20,0:16:48.15:0,48,1091	0/0:5,0:5:12.04:0,12,294	0/0:16,0:15:42.06:0,42,1089	0/0:12,0:12:25.83:0,26,256	0/0:8,0:8:24.08:0,24,503	0/0:14,0:13:34.02:0,34,705	0/0:17,0:13:30.09:0,30,511	0/0:11,0:10:29.97:0,30,649	1/1:14,1:14:35.94:426,36,0	1/1:16,2:17:42:494,42,0	0/0:5,0:4:6.91:0,7,151	0/1:19,0:19:10.54:11,0,604	0/0:11,0:11:30.08:0,30,551	0/0:10,0:9:27.07:0,27,435
chr10	72147159	.	A	AAC	578.82	PASS	AB=0.892;AC=10;AF=0.179;AN=56;BaseQRankSum=6.788;DP=514;FS=12.152;HRun=0;HaplotypeScore=106.8161;InbreedingCoeff=0.4383;MQ=56.11;MQ0=30;MQRankSum=-4.360;QD=3.94;ReadPosRankSum=1.830;VQSLOD=1.2670;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:8:23.11:23,0,27	0/0:5,0:5:15:0,15,131	0/0:80,0:14:22.10:0,22,224	0/1:77,0:13:5.57:6,0,128	0/0:22,0:22:48.19:0,48,559	0/0:12,0:11:30.08:0,30,384	0/0:16,0:15:32.05:0,32,336	0/0:14,0:13:36:0,36,409	0/0:12,0:11:27.42:0,27,277	1/1:6,1:6:6.89:102,7,0	1/1:8,7:15:0.70:225,1,0	0/0:21,0:21:59.99:0,60,635	1/1:8,2:7:6.32:110,6,0	0/0:11,0:11:32.83:0,33,339	0/0:25,0:21:60.98:0,61,631	0/0:7,0:7:17.99:0,18,186	0/0:19,0:18:52.87:0,53,589	0/0:15,0:14:5.84:0,6,149	0/0:14,0:11:29.86:0,30,325	0/0:13,0:12:36.01:0,36,424	0/0:13,0:10:20.95:0,21,228	0/0:13,0:12:36.09:0,36,436	0/1:5,5:10:3.13:124,0,3	0/1:16,2:16:11.47:127,0,11	0/0:13,0:13:27.41:0,27,240	0/0:17,0:16:50.31:0,50,548	0/0:12,0:12:29.85:0,30,292	0/0:13,0:12:24.12:0,24,295
chr10	72147160	.	AAAACAAAAAAAAC	A	4122.91	PASS	AB=0.972;AC=14;AF=0.250;AN=56;BaseQRankSum=8.975;DP=508;FS=5.083;HRun=0;HaplotypeScore=162.6634;InbreedingCoeff=0.7546;MQ=54.08;MQ0=29;MQRankSum=-7.772;QD=42.50;ReadPosRankSum=4.025;VQSLOD=3.0704;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:8:4.17:119,4,0	0/0:5,0:5:15.05:0,15,792	0/0:78,0:13:25.12:0,25,501	0/0:75,0:12:9.52:0,10,401	0/0:21,0:21:56.83:0,57,2146	0/0:12,0:11:30.10:0,30,1514	0/0:16,0:15:35.95:0,36,1308	0/0:14,0:13:39.12:0,39,1611	0/0:12,0:11:33.11:0,33,1660	1/1:5,1:6:18.01:430,18,0	1/1:11,4:15:45.05:1122,45,0	0/0:21,0:21:63.20:0,63,2482	1/1:5,5:7:1.07:399,1,0	0/0:12,0:12:36.04:0,36,1276	0/0:25,0:21:61.41:0,61,2977	0/0:7,0:7:18.05:0,18,610	0/0:19,0:18:53.26:0,53,2541	0/0:15,0:14:35.49:0,35,671	0/1:13,0:10:0.88:1,0,1203	0/0:14,0:13:39.09:0,39,1645	0/0:13,0:10:21.07:0,21,931	0/0:14,0:13:36.12:0,36,1603	1/1:6,4:10:27.02:726,27,0	1/1:5,10:14:39.05:1261,39,0	0/0:12,0:12:27.09:0,27,1409	0/1:16,1:16:65.29:65,0,2186	0/0:12,0:12:32.99:0,33,1404	0/0:13,0:12:30.07:0,30,1209
chr10	72147172	.	AC	A	855.48	PASS	AB=0.984;AC=14;AF=0.250;AN=56;BaseQRankSum=11.008;DP=474;FS=0.000;HRun=2;HaplotypeScore=85.9815;InbreedingCoeff=0.6802;MQ=44.38;MQ0=23;MQRankSum=-10.189;QD=7.50;ReadPosRankSum=0.567;VQSLOD=0.7143;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:13:18.49:112,18,0	0/1:7,0:7:1.63:2,0,196	0/0:58,1:8:11.18:0,11,119	0/0:60,1:8:16.73:0,17,141	0/0:17,0:17:44.95:0,45,530	0/0:11,0:10:27.01:0,27,337	0/0:15,0:14:27.15:0,27,335	0/0:14,0:12:14.19:0,14,410	0/0:13,0:12:33.10:0,33,445	1/1:7,5:10:29.44:222,29,0	1/1:10,2:12:31.93:190,32,0	0/0:17,0:17:31.67:0,32,498	0/1:8,0:5:5.46:55,0,5	0/0:11,0:11:29.16:0,29,298	0/0:25,0:21:50.57:0,51,741	0/0:4,0:4:9.03:0,9,114	0/0:17,0:16:46.65:0,47,572	0/1:14,0:11:23.97:24,0,49	0/1:14,0:11:2.81:3,0,278	0/0:16,0:15:41.36:0,41,477	0/0:13,0:11:26.40:0,26,296	0/0:15,0:14:39.09:0,39,495	1/1:7,3:9:23.57:152,24,0	1/1:19,1:19:41.17:276,41,0	0/0:12,0:12:19.09:0,19,248	0/0:18,1:17:31.43:0,31,579	0/0:10,0:10:27.05:0,27,348	0/0:10,0:10:22.45:0,22,234
chr10	72147173	.	CCA	C	633.37	PASS	AB=0.900;AC=8;AF=0.143;AN=56;BaseQRankSum=9.738;DP=475;FS=0.630;HRun=0;HaplotypeScore=93.3627;InbreedingCoeff=0.1877;MQ=44.28;MQ0=22;MQRankSum=-7.463;QD=6.53;ReadPosRankSum=2.854;VQSLOD=3.2536;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:13:16.18:85,16,0	0/0:7,0:7:18.53:0,19,359	0/0:56,0:8:11.84:0,12,145	0/0:62,0:8:17.06:0,17,235	0/0:17,0:17:45.07:0,45,788	0/0:11,0:10:26.68:0,27,476	0/0:15,0:14:30.09:0,30,505	0/0:14,0:12:14.21:0,14,601	0/0:13,0:12:33.10:0,33,632	0/1:10,2:10:52.78:78,0,53	0/1:11,3:14:19.25:195,0,19	0/0:17,0:17:51.14:0,51,880	0/1:7,1:5:22.29:45,0,22	0/0:10,0:11:30.02:0,30,500	0/0:25,0:21:52.08:0,52,1117	0/0:3,0:3:9.03:0,9,178	0/0:17,0:16:48.14:0,48,883	0/1:14,0:10:54.17:54,0,57	0/0:14,0:11:31.46:0,31,518	0/0:16,0:16:45.13:0,45,792	0/0:13,0:11:27.08:0,27,488	0/0:15,0:14:39.12:0,39,704	0/1:10,1:10:32.63:84,0,33	0/1:20,2:20:2.70:232,0,3	0/0:12,0:12:26.45:0,26,443	0/0:19,0:17:49.43:0,49,974	0/0:10,0:10:27.09:0,27,512	0/0:10,0:10:23.11:0,23,343
chr10	72147195	.	CAAAAA	C	1106.76	PASS	AB=0.882;AC=11;AF=0.196;AN=56;BaseQRankSum=8.278;DP=446;FS=1.334;HRun=17;HaplotypeScore=108.8822;InbreedingCoeff=0.8048;MQ=48.02;MQ0=6;MQRankSum=-5.862;QD=11.77;ReadPosRankSum=4.627;VQSLOD=-0.2455;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:10:5.60:0,6,36	0/0:7,0:8:24.02:0,24,447	0/0:22,0:5:6:0,6,63	0/0:27,0:3:0:0,0,0	0/0:16,0:17:44.55:0,45,637	0/0:7,0:7:18.02:0,18,336	0/0:17,0:16:39.06:0,39,722	0/0:15,0:17:42.10:0,42,671	0/0:13,0:15:30.06:0,30,665	1/1:4,0:19:35.10:293,35,0	1/1:2,0:12:23.64:208,24,0	0/0:17,0:18:51.17:0,51,1087	1/1:4,2:5:11.91:148,12,0	0/0:14,0:14:36.12:0,36,820	0/0:21,0:19:54.18:0,54,1178	0/0:7,0:7:21:0,21,308	0/0:15,0:16:36.12:0,36,736	0/1:13,0:12:34.05:68,0,34	0/0:22,0:20:53.10:0,53,924	0/0:8,0:12:29.69:0,30,623	0/0:16,0:15:39.06:0,39,672	0/0:10,0:9:24.08:0,24,472	1/1:4,8:12:23.81:307,24,0	1/1:8,18:24:17.70:255,18,0	0/0:9,0:13:36.12:0,36,804	0/0:23,0:23:35.19:0,35,993	0/0:14,0:13:38.58:0,39,638	0/0:11,0:11:23.88:0,24,340
chr10	72147210	.	A	AAC	501.86	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=7.740;DP=466;FS=5.631;HRun=0;HaplotypeScore=103.1570;InbreedingCoeff=0.7607;MQ=56.60;MQ0=6;MQRankSum=-5.231;QD=3.80;ReadPosRankSum=2.786;VQSLOD=2.0603;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,10:18:5.96:64,6,0	0/0:9,0:9:17.92:0,18,163	0/0:18,0:8:8.13:0,8,81	0/1:12,0:5:4.62:5,0,12	0/0:19,0:19:30.11:0,30,284	0/0:10,0:9:15.45:0,15,134	0/0:23,0:22:50.93:0,51,472	0/0:26,0:23:60.83:0,61,558	0/0:18,0:18:33.47:0,33,319	1/1:18,0:17:30.91:185,31,0	1/1:11,0:11:13.14:79,13,0	0/0:23,0:23:40.73:0,41,331	1/1:6,0:6:12.02:65,12,0	0/0:15,0:15:38.66:0,39,333	0/0:25,0:23:50.70:0,51,471	0/0:9,0:8:6.25:0,6,138	0/0:17,0:17:32.92:0,33,299	1/1:14,0:11:18.66:147,19,0	0/0:29,0:25:63.42:0,63,542	0/0:15,0:15:26.79:0,27,229	0/0:17,0:16:35.90:0,36,350	0/0:12,0:11:23.87:0,24,229	1/1:16,0:15:18.61:116,19,0	1/1:20,0:19:0.44:18,0,0	0/0:14,0:14:32.93:0,33,334	0/0:28,0:26:32.19:0,32,405	0/1:16,0:15:2.21:2,0,141	0/0:7,0:7:8.61:0,9,47
chr10	72147599	.	GA	G	1321.16	PASS	AB=0.917;AC=3;AF=0.054;AN=56;BaseQRankSum=8.365;DP=617;FS=0.489;HRun=10;HaplotypeScore=65.8179;InbreedingCoeff=0.5308;MQ=72.73;MQ0=0;MQRankSum=0.575;QD=18.87;ReadPosRankSum=5.127;VQSLOD=4.1739;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,58:59:99:1399,162,0	0/0:9,0:9:15.03:0,15,159	0/0:23,0:21:0.70:0,1,246	0/1:9,1:11:27.39:27,0,66	0/0:22,0:22:48:0,48,497	0/0:18,0:18:51.14:0,51,562	0/0:36,1:37:64.17:0,64,927	0/0:28,1:29:48.01:0,48,739	0/0:28,0:28:78.19:0,78,846	0/0:25,0:25:54.12:0,54,574	0/0:17,0:17:33.05:0,33,350	0/0:28,0:28:68.67:0,69,727	0/0:15,0:15:39.11:0,39,431	0/0:16,0:16:42.11:0,42,465	0/0:17,0:17:45.12:0,45,497	0/0:19,0:19:48.13:0,48,531	0/0:39,0:39:99:0,111,1196	0/0:28,0:28:72.17:0,72,785	0/0:19,0:19:54.12:0,54,579	0/0:13,0:13:24.06:0,24,265	0/0:22,1:23:41.92:0,42,597	0/0:14,1:15:12.99:0,13,349	0/0:15,0:15:38.97:0,39,400	0/0:34,1:34:73.20:0,73,1025	0/0:8,0:8:24.03:0,24,248	0/0:22,1:23:22.06:0,22,458	0/0:17,0:17:35.92:0,36,368	0/0:7,0:7:18.05:0,18,199
chr10	72147901	.	T	TA	519.18	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=4.704;DP=179;FS=3.851;HRun=0;HaplotypeScore=24.7406;InbreedingCoeff=0.6529;MQ=72.87;MQ0=5;MQRankSum=0.197;QD=12.98;ReadPosRankSum=0.867;VQSLOD=3.7442;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:20.07:0,20,165	0/0:5,0:5:14.94:0,15,184	0/0:19,0:6:17.67:0,18,178	0/0:17,0:8:22.01:0,22,136	0/0:8,0:8:24.08:0,24,329	0/0:6,0:6:18.06:0,18,242	0/1:6,0:6:9.57:10,0,169	0/0:7,0:7:21.06:0,21,279	0/0:4,0:4:12.04:0,12,164	1/1:3,7:10:19.06:195,19,0	1/1:1,6:7:0.32:174,0,0	0/0:6,0:6:18.06:0,18,240	1/1:5,2:7:9.52:98,10,0	0/0:4,0:4:12.04:0,12,165	0/0:4,0:4:12.03:0,12,150	0/0:3,0:3:9.03:0,9,122	0/0:10,0:10:30.10:0,30,416	0/0:5,0:5:15.05:0,15,208	0/0:6,0:6:18.04:0,18,233	0/0:2,0:2:6.02:0,6,84	0/0:3,0:3:6.02:0,6,84	0/0:2,0:2:3.01:0,3,42	1/1:1,4:5:11.82:131,12,0	1/1:1,4:5:6.01:64,6,0	0/0:3,0:3:9.03:0,9,126	0/0:9,0:9:27.08:0,27,362	0/0:4,0:4:12.04:0,12,164	0/0:4,0:4:12.04:0,12,167
chr10	72157815	.	C	CTCAGAAAGTCCT	18701.27	PASS	AB=0.944;AC=23;AF=0.411;AN=56;BaseQRankSum=-1.818;DP=437;FS=2.391;HRun=0;HaplotypeScore=147.5957;InbreedingCoeff=0.8948;MQ=84.84;MQ0=1;MQRankSum=-14.175;QD=110.01;ReadPosRankSum=2.356;VQSLOD=5.3390;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,2:13:21.07:963,21,0	0/0:8,0:8:18.06:0,18,535	0/0:24,0:23:32.48:0,32,1153	0/0:22,0:17:6.66:0,7,504	0/0:19,0:19:48.12:0,48,1458	0/0:23,0:23:63.22:0,63,2209	0/0:14,0:14:23.64:0,24,1318	0/0:29,0:29:66.23:0,66,2232	0/0:11,0:11:30.10:0,30,1041	1/1:11,6:19:51.18:2421,51,0	1/1:7,8:16:39.13:2080,39,0	1/1:5,4:9:21.07:1026,21,0	1/1:10,11:21:51.18:2836,51,0	0/0:10,0:10:21.07:0,21,727	0/0:13,0:13:30.10:0,30,1020	0/0:16,0:16:45.14:0,45,1469	1/1:12,5:17:42.14:2157,42,0	1/1:3,3:6:10.44:556,10,0	0/0:16,0:16:39.13:0,39,1300	0/0:24,0:24:60.17:0,60,1782	0/0:8,0:8:21.07:0,21,728	1/1:11,6:17:42.14:2059,42,0	1/1:8,8:16:39.13:1980,39,0	1/1:2,2:4:9.03:526,9,0	1/1:3,11:14:36.12:1966,36,0	0/1:16,1:17:99:132,0,1540	0/0:16,0:16:35.85:0,36,1068	0/0:13,0:13:33.11:0,33,1193
chr10	72157840	.	GA	G	655.61	PASS	AB=0.862;AC=15;AF=0.268;AN=56;BaseQRankSum=4.988;DP=475;FS=0.000;HRun=14;HaplotypeScore=102.2728;InbreedingCoeff=0.4074;MQ=76.45;MQ0=2;MQRankSum=-2.754;QD=3.77;ReadPosRankSum=1.399;VQSLOD=1.3399;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:16:37.75:252,38,0	0/0:6,0:6:8.04:0,8,62	0/0:29,1:22:16.82:0,17,184	0/1:26,1:18:12.11:12,0,116	0/0:17,1:21:14.72:0,15,281	0/0:21,2:24:13.96:0,14,387	0/0:14,0:16:38.66:0,39,321	0/0:34,1:35:58.22:0,58,508	0/0:9,0:10:10.09:0,10,73	1/1:6,9:17:24.77:155,25,0	0/1:15,4:19:31.73:81,0,32	0/0:8,0:8:20.91:0,21,170	0/0:18,1:19:21.45:0,21,337	0/1:6,1:7:2.53:3,0,116	0/0:12,1:14:10.90:0,11,214	0/1:14,2:15:0.90:1,0,257	1/1:6,8:14:17.76:123,18,0	1/1:3,6:9:17.80:122,18,0	0/1:15,2:18:1.99:2,0,254	0/0:19,4:23:7.35:0,7,346	0/0:14,0:15:10.43:0,10,210	0/0:14,0:14:4.08:0,4,169	0/0:16,0:18:28.53:0,29,234	0/0:4,0:4:11.99:0,12,106	0/1:9,5:14:13.04:67,0,13	0/0:22,1:23:15.42:0,15,270	0/0:16,0:20:35.84:0,36,310	0/1:13,3:16:1.26:1,0,261
chr10	72157914	.	AAGAGAGAG	A	413.38	PASS	AB=0.933;AC=15;AF=0.313;AN=48;BaseQRankSum=4.148;DP=419;FS=2.130;HRun=0;HaplotypeScore=105.9802;InbreedingCoeff=0.5585;MQ=72.58;MQ0=15;MQRankSum=-1.932;QD=3.76;ReadPosRankSum=-0.173;VQSLOD=2.1697;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:18.06:0,18,567	0/0:7,0:7:15.05:0,15,432	./.	./.	0/0:11,0:11:15.02:0,15,403	0/0:11,0:11:15.05:0,15,459	0/0:7,0:6:5.98:0,6,48	0/0:26,0:25:3.01:0,3,43	0/0:6,0:6:6:0,6,106	1/1:14,0:14:4.26:75,4,0	1/1:10,0:10:3.01:33,3,0	1/1:9,0:12:3.01:40,3,0	1/1:16,0:15:3.01:74,3,0	0/0:11,0:11:9.50:0,10,275	0/0:12,0:13:21.06:0,21,639	0/0:7,0:7:12.02:0,12,303	0/1:13,0:14:20.91:21,0,28	./.	0/0:18,0:17:6.02:0,6,216	0/0:13,0:13:12:0,12,214	0/0:15,0:16:15.01:0,15,315	./.	1/1:18,2:19:5.98:97,6,0	1/1:13,1:14:9.02:148,9,0	1/1:8,2:10:3.01:74,3,0	0/0:14,0:14:21.07:0,21,604	0/0:13,0:15:12.02:0,12,236	0/0:14,0:11:5.50:0,6,112
chr10	72158027	.	G	GT	733.27	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.617;DP=562;FS=1.781;HRun=6;HaplotypeScore=68.8360;InbreedingCoeff=0.9961;MQ=85.81;MQ0=0;MQRankSum=-1.909;QD=30.55;ReadPosRankSum=0.501;VQSLOD=4.2628;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:75.17:0,75,764	0/0:15,0:15:45.09:0,45,453	0/0:16,0:16:39.05:0,39,387	0/0:23,0:23:63.10:0,63,626	0/0:20,0:20:60.12:0,60,606	0/0:19,0:19:51.12:0,51,520	0/0:24,0:24:63.08:0,63,620	0/0:38,0:38:90.15:0,90,904	0/0:13,0:13:39.09:0,39,397	0/0:15,0:15:39.09:0,39,398	0/0:16,0:16:42.09:0,42,428	0/0:12,0:12:27.05:0,27,275	0/0:16,0:16:45.10:0,45,459	0/0:15,0:15:45.07:0,45,444	0/0:20,0:20:51.11:0,51,520	0/0:29,0:29:84.19:0,84,857	0/0:24,0:24:69.13:0,69,696	1/1:0,24:24:66.21:828,66,0	0/0:9,0:9:24.01:0,24,234	0/0:23,0:23:63.14:0,63,642	0/0:16,0:16:42.09:0,42,428	0/0:19,0:19:54.12:0,54,551	0/0:26,0:26:75.17:0,75,765	0/0:25,0:25:63.11:0,63,633	0/0:16,0:16:45.10:0,45,459	0/0:25,0:25:69.15:0,69,698	0/0:22,0:22:66.15:0,66,673	0/0:12,0:12:30.06:0,30,305
chr10	72158203	.	TAC	T	212.39	PASS	AB=0.894;AC=10;AF=0.185;AN=54;BaseQRankSum=3.132;DP=629;FS=3.033;HRun=0;HaplotypeScore=115.2845;InbreedingCoeff=-0.1531;MQ=57.32;MQ0=5;MQRankSum=2.130;QD=0.98;ReadPosRankSum=0.798;VQSLOD=2.3384;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:9.43:0,9,83	0/0:10,0:10:6.01:0,6,64	./.	0/0:29,0:17:3.01:0,3,45	0/1:13,3:16:39.95:40,0,271	0/0:14,0:13:18.06:0,18,272	0/1:32,6:38:76.87:77,0,615	0/0:18,0:18:9.03:0,9,135	0/0:21,0:21:3.47:0,3,435	0/0:27,0:25:49.04:0,49,430	0/0:10,0:10:2.06:0,2,32	0/0:25,0:31:8.36:0,8,77	0/0:19,0:19:13.61:0,14,127	0/0:23,1:24:5.61:0,6,486	0/1:27,3:30:37.30:37,0,670	0/1:19,4:23:27.93:28,0,412	0/0:14,0:26:6.22:0,6,38	0/0:11,0:14:9.02:0,9,103	0/1:23,1:24:9.64:10,0,263	0/1:15,3:18:45.97:46,0,203	0/1:43,4:45:58.89:59,0,748	0/0:27,0:25:2.98:0,3,8	0/0:14,0:13:6.36:0,6,40	0/0:34,0:38:6.69:0,7,72	0/0:16,0:20:6:0,6,52	0/1:17,1:18:15.46:15,0,208	0/0:7,0:15:24.01:0,24,243	1/1:2,1:3:3.01:34,3,0
chr10	72160626	.	GGAGTACCCGT	G	17554.78	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=18.960;DP=757;FS=0.313;HRun=0;HaplotypeScore=237.5897;InbreedingCoeff=0.9995;MQ=86.62;MQ0=0;MQRankSum=-19.293;QD=65.50;ReadPosRankSum=2.515;VQSLOD=4.5264;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,35:47:84.63:2607,85,0	0/0:11,0:11:33.07:0,33,1457	0/0:29,0:29:78.22:0,78,3091	0/0:30,0:30:87.29:0,87,4009	0/0:21,0:21:57.20:0,57,2813	0/0:28,0:28:84.27:0,84,4191	0/0:30,0:30:87.28:0,87,4434	0/0:39,0:39:99:0,114,5501	0/0:22,0:22:63.22:0,63,3288	1/1:3,21:24:63.22:2052,63,0	1/1:3,27:30:60.12:1834,60,0	1/1:0,29:29:75.21:2392,75,0	1/1:5,33:38:72.25:2372,72,0	0/0:27,0:27:72.25:0,72,3675	0/0:28,0:28:81.28:0,81,4142	0/0:34,0:34:96.28:0,96,4482	1/1:2,12:14:24.08:791,24,0	0/0:19,0:18:51.13:0,51,2488	0/0:20,0:20:51.17:0,51,2520	0/0:32,0:32:96.32:0,96,4564	0/0:47,0:47:99:0,138,6748	1/1:3,20:23:51.13:1540,51,0	1/1:5,19:24:48.16:1520,48,0	1/1:4,14:18:27.09:865,27,0	1/1:0,21:21:48.16:1581,48,0	0/0:24,0:24:69.24:0,69,3375	0/0:33,0:33:99:0,99,4989	0/0:15,0:15:45.09:0,45,1840
chr10	72165111	.	AG	A	4250.43	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.928;DP=485;FS=37.084;HRun=2;HaplotypeScore=282.5149;InbreedingCoeff=0.7827;MQ=51.45;MQ0=10;MQRankSum=-3.971;QD=9.28;ReadPosRankSum=2.012;VQSLOD=0.5936;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:33.21:120,33,0	1/1:6,3:9:20.96:112,21,0	0/0:13,0:12:2.27:0,2,37	0/0:13,0:10:11.92:0,12,87	1/1:13,9:21:46.56:290,47,0	1/1:13,1:14:30.16:119,30,0	1/1:17,1:19:35.09:123,35,0	1/1:11,0:11:25:93,25,0	1/1:16,1:17:34.88:120,35,0	1/1:15,8:23:61.86:381,62,0	1/1:6,6:12:31.20:178,31,0	1/1:24,0:24:51.32:198,51,0	1/1:17,1:18:35.06:122,35,0	1/1:19,0:19:37.38:126,37,0	1/1:25,1:25:53.15:199,53,0	1/1:21,1:21:49.23:216,49,0	1/1:8,1:8:12.15:49,12,0	1/1:3,0:3:8.43:59,8,0	1/1:7,0:7:18.84:91,19,0	1/1:14,6:20:48.71:211,49,0	1/1:19,0:19:28.84:115,29,0	1/1:24,11:33:64.29:299,64,0	1/1:16,6:22:42.38:178,42,0	1/1:17,0:17:11.36:35,11,0	1/1:13,11:23:56.53:303,57,0	1/1:21,3:23:61.56:316,62,0	1/1:15,5:19:36.44:147,36,0	1/1:3,1:4:10.54:51,11,0
chr10	72165138	.	T	TACACACT	598.68	PASS	AB=0.667;AC=2;AF=0.50;AN=4;BaseQRankSum=-0.296;DP=10;FS=7.782;HRun=0;HaplotypeScore=77.1313;MQ=254.00;MQ0=0;MQRankSum=-1.580;QD=59.87;ReadPosRankSum=1.214;VQSLOD=2.8041;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:2,3:7:25.43:517,0,25	0/1:2,0:3:28.98:147,0,29	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	72166056	.	A	AC	1148.35	PASS	AB=0.843;AC=11;AF=0.196;AN=56;BaseQRankSum=14.090;DP=854;FS=137.305;HRun=1;HaplotypeScore=372.3600;InbreedingCoeff=-0.2371;MQ=42.85;MQ0=3;MQRankSum=-13.082;QD=2.97;ReadPosRankSum=-2.366;VQSLOD=-0.1444;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:8.91:0,9,150	0/1:17,5:22:54.79:55,0,361	0/0:31,0:23:69.19:0,69,870	0/0:30,0:21:60.18:0,60,757	0/1:33,5:38:38.87:39,0,429	0/0:26,0:26:51.25:0,51,695	0/0:25,0:25:36.32:0,36,504	0/0:50,0:50:99:0,119,1631	0/0:33,0:33:54.79:0,55,749	0/1:38,9:46:99:229,0,929	0/1:18,11:29:84.65:85,0,139	0/0:39,0:39:62.51:0,63,923	0/1:17,1:18:0.50:1,0,304	0/0:30,0:30:49.43:0,49,650	0/0:35,0:35:62.24:0,62,791	0/0:43,0:43:54.91:0,55,697	0/0:9,0:9:9.26:0,9,149	0/0:14,0:14:35.66:0,36,419	0/0:21,0:20:54.18:0,54,698	0/1:32,10:42:99:178,0,888	0/0:14,0:14:24.55:0,25,313	0/1:36,7:43:99:142,0,600	0/1:28,8:36:99:204,0,358	0/0:19,0:19:30.10:0,30,387	0/1:30,11:41:99:268,0,318	0/1:49,4:53:75.58:76,0,1283	0/0:31,1:32:57.61:0,58,739	0/1:15,3:18:16.53:17,0,381
chr10	72166081	.	T	TCACA	8420.81	PASS	AB=0.683;AC=18;AF=0.321;AN=56;BaseQRankSum=5.822;DP=841;FS=40.085;HRun=0;HaplotypeScore=320.4992;InbreedingCoeff=0.8604;MQ=45.95;MQ0=11;MQRankSum=-7.249;QD=27.52;ReadPosRankSum=-2.112;VQSLOD=3.2744;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,1:25:39.09:661,39,0	0/0:17,0:17:27.66:0,28,520	0/0:35,0:20:18.42:0,18,165	0/0:29,0:20:23.95:0,24,287	0/0:36,0:36:29.54:0,30,987	0/0:22,0:22:31.66:0,32,720	0/0:27,0:27:25.34:0,25,461	0/0:46,0:47:94.83:0,95,1365	0/0:30,0:30:68.46:0,68,1130	1/1:34,0:37:19.38:606,19,0	0/1:17,2:26:4.57:179,0,5	1/1:16,22:39:73.58:1671,74,0	1/1:7,13:21:47.60:985,48,0	0/0:26,0:26:54.18:0,54,872	0/0:36,0:36:78.11:0,78,1218	0/0:42,0:42:83.08:0,83,1576	1/1:8,2:16:33.09:587,33,0	0/0:17,0:18:48.16:0,48,780	0/0:14,0:14:18.06:0,18,283	0/0:43,0:43:60.93:0,61,1235	0/0:19,0:19:40.08:0,40,645	1/1:24,18:44:71:1503,71,0	0/1:13,20:33:6.92:881,0,7	1/1:2,19:21:36.04:887,36,0	1/1:28,1:36:10.02:460,10,0	0/0:46,0:46:43.50:0,43,1368	0/0:29,0:29:39.39:0,39,901	0/0:18,0:18:21.12:0,21,454
chr10	72167093	.	ATTTT	A	4327.60	PASS	AB=0.895;AC=19;AF=0.339;AN=56;BaseQRankSum=6.979;DP=535;FS=5.818;HRun=16;HaplotypeScore=96.8259;InbreedingCoeff=0.8925;MQ=68.78;MQ0=0;MQRankSum=1.014;QD=21.97;ReadPosRankSum=6.779;VQSLOD=3.7756;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:28:36.95:0,37,335	0/0:6,0:7:12.03:0,12,172	0/0:11,0:7:6.02:0,6,78	0/0:13,0:10:5.95:0,6,48	0/0:18,0:20:48.03:0,48,980	0/0:15,0:16:39.12:0,39,779	0/0:7,0:7:18.06:0,18,372	0/0:27,0:35:69.20:0,69,1172	0/0:16,0:19:42.14:0,42,891	1/1:4,15:19:44.99:576,45,0	1/1:3,17:20:32.66:390,33,0	1/1:5,14:20:32.96:418,33,0	1/1:4,14:18:29.95:376,30,0	0/0:12,0:15:27.09:0,27,527	0/0:21,0:25:51.17:0,51,1008	0/0:18,0:24:51.09:0,51,940	1/1:7,17:25:43.16:555,43,0	0/0:4,0:11:23.53:0,24,160	0/0:29,0:30:66.14:0,66,1338	0/0:25,0:29:60.20:0,60,1163	0/0:10,0:10:27.09:0,27,566	1/1:1,17:19:51.08:655,51,0	1/1:5,21:26:50.75:631,51,0	1/1:4,10:16:26.93:323,27,0	1/1:2,15:17:35.88:395,36,0	0/1:15,1:17:8.23:8,0,543	0/0:20,0:26:57.09:0,57,1013	0/0:9,0:12:27.01:0,27,475
chr10	72167267	.	AT	A	668.13	PASS	AB=0.920;AC=5;AF=0.089;AN=56;BaseQRankSum=3.297;DP=605;FS=0.580;HRun=11;HaplotypeScore=73.6356;InbreedingCoeff=0.6889;MQ=70.02;MQ0=0;MQRankSum=-0.465;QD=10.28;ReadPosRankSum=1.072;VQSLOD=2.9761;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:26:53.93:443,54,0	0/0:10,0:10:30.07:0,30,319	0/1:21,2:20:33.82:34,0,200	0/0:11,0:10:0.10:0,0,140	0/0:34,0:34:73.41:0,73,762	0/0:16,1:17:17.25:0,17,383	0/0:18,0:18:51.13:0,51,544	0/0:32,2:34:56.44:0,56,767	0/0:17,0:17:48.12:0,48,512	0/0:21,0:21:57.12:0,57,597	0/0:30,0:30:84.07:0,84,871	0/0:15,1:16:14.38:0,14,338	0/0:18,0:18:45.07:0,45,467	0/0:12,0:12:36.06:0,36,369	0/0:18,0:18:42.11:0,42,448	0/0:17,0:17:21.53:0,22,418	0/0:25,0:25:72.14:0,72,754	1/1:1,15:16:38.95:320,39,0	0/0:35,2:38:65.19:0,65,851	0/0:27,1:31:77.94:0,78,782	0/0:18,0:18:51.12:0,51,537	0/0:23,0:23:57.14:0,57,605	0/0:20,1:21:35.49:0,35,567	0/0:21,0:21:57.12:0,57,599	0/0:22,1:23:44.36:0,44,662	0/0:26,0:26:54.14:0,54,576	0/0:29,2:31:47.53:0,48,704	0/0:10,0:10:30.08:0,30,319
chr10	72167636	.	G	GA	5893.65	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=2.331;DP=627;FS=7.041;HRun=9;HaplotypeScore=83.8316;InbreedingCoeff=0.9483;MQ=75.09;MQ0=4;MQRankSum=-1.152;QD=20.61;ReadPosRankSum=1.198;VQSLOD=5.4533;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:38:71.51:358,72,0	0/1:11,0:11:0.12:0,0,227	0/0:28,0:19:33.89:0,34,232	0/0:30,0:23:11.08:0,11,210	0/0:34,0:34:89.96:0,90,777	0/0:19,0:19:53.95:0,54,460	0/0:15,0:15:35.96:0,36,305	0/0:26,2:28:31.64:0,32,550	0/0:13,0:13:38.99:0,39,339	1/1:3,18:21:41.08:598,41,0	1/1:8,19:27:34.39:602,34,0	1/1:4,18:22:35.43:512,35,0	1/1:4,14:18:36.10:398,36,0	0/0:11,0:11:29.98:0,30,257	0/0:18,0:18:38.94:0,39,331	0/0:26,0:26:77.95:0,78,668	1/1:5,34:39:99:1095,100,0	1/1:7,0:28:57.36:285,57,0	0/0:21,0:21:17.88:0,18,379	0/0:28,0:28:77.96:0,78,674	0/0:11,0:11:29.57:0,30,241	1/1:4,19:23:34.11:603,34,0	1/1:2,12:14:10.04:339,10,0	1/1:2,17:19:45.12:498,45,0	1/1:5,19:26:40.31:605,40,0	0/0:20,1:21:26.78:0,27,459	0/0:28,0:28:62.94:0,63,543	0/0:10,0:10:23.99:0,24,208
chr10	72168146	.	GA	G	1490.01	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.880;DP=720;FS=0.543;HRun=6;HaplotypeScore=67.0282;InbreedingCoeff=0.9998;MQ=84.96;MQ0=0;MQRankSum=-3.619;QD=27.09;ReadPosRankSum=1.989;VQSLOD=4.1705;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:35:90.22:967,90,0	0/0:11,0:11:33.11:0,33,433	0/0:29,0:29:72.23:0,72,937	0/0:22,0:21:54.09:0,54,637	0/0:27,0:27:78.24:0,78,1011	0/0:24,0:24:72.23:0,72,946	0/0:27,0:27:75.23:0,75,972	0/0:37,0:37:99:0,102,1321	0/0:28,0:28:75.24:0,75,970	0/0:25,0:25:66.21:0,66,852	0/0:27,0:27:78.23:0,78,999	0/0:22,0:22:63.20:0,63,828	0/0:28,0:28:81.25:0,81,1049	0/0:23,0:23:69.22:0,69,894	0/0:26,0:26:69.22:0,69,895	0/0:38,0:38:99:0,111,1431	0/0:13,0:13:39.13:0,39,513	1/1:0,20:20:60.15:645,60,0	0/0:20,0:20:54.12:0,54,671	0/0:36,0:36:99:0,105,1342	0/0:31,0:31:87.27:0,87,1130	0/0:36,0:36:99:0,108,1392	0/0:23,0:23:63.19:0,63,813	0/0:20,0:20:57.10:0,57,698	0/0:33,0:33:90.28:0,90,1170	0/0:22,0:22:60.20:0,60,790	0/0:22,0:22:66.21:0,66,868	0/0:15,0:15:45.09:0,45,533
chr10	72170441	.	GTC	G	612.17	PASS	AB=1.000;AC=24;AF=0.462;AN=52;BaseQRankSum=0.906;DP=491;FS=4.117;HRun=0;HaplotypeScore=86.3538;InbreedingCoeff=0.1451;MQ=62.13;MQ0=10;MQRankSum=0.556;QD=2.16;ReadPosRankSum=4.677;VQSLOD=1.2664;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:16:20.64:146,21,0	1/1:5,0:5:2.98:21,3,0	./.	./.	0/1:16,0:16:50.38:64,0,50	0/0:19,0:22:6.08:0,6,63	0/1:20,0:20:32.75:33,0,44	0/0:25,0:25:4.21:0,4,23	0/1:10,0:10:27.76:28,0,38	1/1:10,0:13:17.60:121,18,0	1/1:19,0:24:8.02:54,8,0	0/0:15,0:13:6:0,6,51	0/0:13,0:13:15.42:0,15,131	0/1:21,0:21:9.20:9,0,119	0/1:11,0:11:3.61:4,0,44	0/1:25,0:24:22.06:22,0,153	1/1:10,0:12:14.53:90,15,0	1/1:7,7:12:2.90:16,3,0	0/1:16,0:15:8.47:8,0,86	0/0:16,0:16:12.37:0,12,95	0/0:19,0:18:8.73:0,9,61	0/0:12,0:11:5.99:0,6,50	0/0:21,0:21:15.91:0,16,113	0/0:25,0:25:19.32:0,19,147	1/1:17,0:19:14.18:104,14,0	0/1:27,0:26:1.32:1,0,258	0/1:19,0:19:11.86:12,0,123	0/1:14,0:14:46.76:47,0,50
chr10	72170534	.	AGG	A	654.80	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=4.183;DP=393;FS=8.101;HRun=11;HaplotypeScore=55.7432;InbreedingCoeff=0.7057;MQ=64.98;MQ0=13;MQRankSum=1.674;QD=7.53;ReadPosRankSum=4.424;VQSLOD=-0.5537;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:15:14.97:0,15,51	0/0:4,0:5:6.01:0,6,57	0/0:30,0:15:14.89:0,15,194	0/0:35,0:10:14.22:0,14,123	0/0:12,0:12:26.58:0,27,248	0/0:15,0:15:20.94:0,21,245	0/0:22,0:20:5.70:0,6,223	0/0:12,0:13:11.50:0,12,124	0/0:15,0:16:34.61:0,35,366	1/1:2,11:12:24.05:248,24,0	1/1:3,11:13:18.02:181,18,0	0/0:15,0:15:31.01:0,31,378	0/0:11,0:11:20.99:0,21,219	0/0:14,0:16:35.84:0,36,339	0/0:11,0:11:23.99:0,24,241	0/0:14,0:14:33.04:0,33,368	1/1:5,17:21:27.06:281,27,0	1/1:8,0:8:4.54:27,5,0	0/0:9,0:9:17.97:0,18,187	0/0:11,0:11:20.59:0,21,218	0/0:5,0:4:2.12:0,2,44	0/0:5,0:5:8.98:0,9,74	0/0:8,0:8:9.01:0,9,98	0/0:10,0:9:15.02:0,15,169	1/1:2,14:16:6.02:64,6,0	0/1:14,0:13:16.93:17,0,86	0/0:11,0:13:20.43:0,20,170	0/0:9,0:10:23.46:0,23,199
chr10	72171609	.	GCT	G	556.67	PASS	AB=0.962;AC=26;AF=0.481;AN=54;BaseQRankSum=1.969;DP=530;FS=3.314;HRun=0;HaplotypeScore=85.3022;InbreedingCoeff=0.0706;MQ=65.78;MQ0=28;MQRankSum=1.511;QD=1.71;ReadPosRankSum=2.559;VQSLOD=1.6508;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:19:0:0,0,0	0/1:13,0:13:8.85:9,0,37	./.	0/0:44,0:17:0:0,0,0	1/1:13,0:12:1.25:3,1,0	1/1:20,0:19:8.73:53,9,0	0/1:26,0:26:12.23:12,0,106	0/0:42,0:40:3.02:0,3,6	0/0:17,0:17:0.78:0,1,16	1/1:12,0:11:2.94:18,3,0	0/1:19,0:19:6.93:7,0,18	0/0:16,0:14:6.38:0,6,47	0/1:14,0:13:25.55:26,0,89	0/1:11,3:13:0.06:0,0,0	0/0:12,0:11:3.35:0,3,16	0/1:15,0:15:7.33:7,0,38	1/1:21,2:23:27.21:224,27,0	1/1:9,0:10:14.71:100,15,0	0/1:13,0:12:23.80:24,0,34	0/0:14,0:14:2.80:0,3,13	0/0:12,0:8:3:0,3,26	1/1:23,0:23:2.31:13,2,0	0/0:13,0:12:3.47:0,3,27	0/1:31,0:25:33.22:33,0,38	1/1:20,0:19:17.35:109,17,0	0/0:13,0:13:3.74:0,4,45	0/1:21,0:21:29.41:41,0,29	1/1:17,0:12:2.97:20,3,0
chr10	72171661	.	TTTCACACA	T	1034.06	PASS	AB=0.954;AC=20;AF=0.385;AN=52;BaseQRankSum=-3.205;DP=433;FS=49.483;HRun=0;HaplotypeScore=132.3448;InbreedingCoeff=-0.4296;MQ=38.26;MQ0=61;MQRankSum=4.310;QD=3.22;ReadPosRankSum=6.589;VQSLOD=0.2791;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:7.55:0,8,27	0/1:9,0:8:14.67:15,0,137	./.	./.	0/1:14,0:13:6.37:28,0,6	0/1:16,0:13:96.26:96,0,109	0/1:24,0:21:31.50:31,0,239	0/0:12,0:10:29.46:0,29,188	0/1:12,0:10:5.26:5,0,110	0/1:11,0:8:42.06:60,0,42	0/0:6,0:11:10.96:0,11,51	0/1:10,9:15:7.79:54,0,8	0/1:15,0:10:60.75:188,0,61	0/0:15,0:14:26.19:0,26,299	0/1:21,0:14:5.93:6,0,164	0/1:16,0:14:65.50:65,0,251	0/1:25,0:22:73.07:183,0,73	0/1:17,0:12:99:129,0,129	0/1:11,0:8:37.55:38,0,183	0/1:13,1:11:55.28:55,0,138	0/0:17,0:9:6.86:0,7,32	0/0:17,0:14:1.04:0,1,40	0/1:9,0:17:3.11:3,0,31	1/1:32,0:23:3.27:98,3,0	0/1:12,0:12:4.91:78,0,5	0/1:19,0:19:3.17:3,0,395	0/1:14,0:12:42.23:42,0,205	0/0:8,0:4:6.49:0,6,102
chr10	72171663	.	TCACA	T	227.99	PASS	AB=0.945;AC=20;AF=0.435;AN=46;BaseQRankSum=3.758;DP=441;FS=1.162;HRun=0;HaplotypeScore=119.7237;InbreedingCoeff=0.2850;MQ=38.19;MQ0=62;MQRankSum=-0.852;QD=0.98;ReadPosRankSum=-1.874;VQSLOD=2.1059;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:30:0.29:0,0,0	0/0:8,0:7:5.56:0,6,60	./.	./.	1/1:14,0:13:2.84:14,3,0	0/0:16,0:13:8.89:0,9,100	0/1:26,0:22:19.63:20,0,158	0/0:14,0:12:0:0,0,0	0/0:13,0:10:2.37:0,2,69	1/1:9,0:8:3:28,3,0	./.	1/1:18,1:15:6.06:80,6,0	1/1:16,0:11:6.01:71,6,0	0/0:15,0:14:10.56:0,11,182	0/0:21,0:14:10.80:0,11,125	0/1:15,0:13:15.60:16,0,177	./.	0/0:18,0:13:3.01:0,3,67	0/0:14,0:11:3.01:0,3,65	0/1:14,0:11:19.03:19,0,96	1/1:21,0:11:0.62:15,1,0	1/1:14,3:14:2.92:17,3,0	1/1:16,0:16:6.39:40,6,0	1/1:26,6:23:3.01:46,3,0	./.	0/0:18,0:18:14.85:0,15,174	0/0:14,0:12:2.45:0,2,134	0/0:8,0:4:5.98:0,6,68
chr10	72172556	.	C	CCA	860.08	PASS	AB=0.779;AC=34;AF=0.944;AN=36;BaseQRankSum=0.549;DP=45;FS=3.128;HRun=0;HaplotypeScore=17.6709;InbreedingCoeff=-0.1890;MQ=141.81;MQ0=0;MQRankSum=-1.793;QD=22.63;ReadPosRankSum=0.403;VQSLOD=3.3854;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:5.93:40,6,0	./.	0/1:4,0:7:12.40:129,0,12	0/1:5,0:6:9.01:107,0,9	./.	./.	./.	1/1:2,0:2:6.01:81,6,0	./.	1/1:0,0:1:2.60:10,3,0	1/1:1,1:2:5.99:48,6,0	1/1:2,0:2:6.01:74,6,0	1/1:1,0:1:3:25,3,0	./.	1/1:1,1:2:3:28,3,0	./.	./.	1/1:1,0:1:3.01:49,3,0	1/1:1,2:3:9.01:106,9,0	1/1:2,0:2:3.01:50,3,0	1/1:2,0:2:5.98:47,6,0	./.	1/1:1,0:1:2.98:21,3,0	./.	1/1:0,1:1:3:26,3,0	1/1:1,0:1:3.01:54,3,0	1/1:0,1:1:3:28,3,0	1/1:0,1:1:3:25,3,0
chr10	72177143	.	CG	C	5354.17	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.990;DP=724;FS=1.445;HRun=5;HaplotypeScore=68.5042;InbreedingCoeff=0.9992;MQ=83.91;MQ0=0;MQRankSum=-2.590;QD=30.95;ReadPosRankSum=3.487;VQSLOD=5.5415;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,45:45:99:1429,126,0	0/0:13,0:13:39.12:0,39,517	0/0:26,0:26:66.22:0,66,900	0/0:16,0:16:44.98:0,45,563	0/0:27,0:27:81.24:0,81,1073	0/0:31,0:31:84.28:0,84,1147	0/0:16,0:16:42.14:0,42,573	0/0:38,0:38:99:0,102,1380	0/0:23,0:23:63.20:0,63,847	0/0:24,0:24:72.23:0,72,967	0/0:25,0:25:69.22:0,69,926	1/1:2,26:28:78.22:883,78,0	1/1:0,22:22:60.16:680,60,0	0/0:21,0:21:63.21:0,63,860	0/0:32,0:32:90.30:0,90,1230	0/0:28,0:28:84.28:0,84,1149	0/0:35,0:35:96.29:0,96,1278	1/1:1,15:16:45.13:509,45,0	0/0:24,0:24:63.21:0,63,861	0/0:43,0:43:99:0,126,1639	0/0:39,0:39:99:0,105,1412	1/1:0,22:22:60.17:680,60,0	1/1:3,21:24:63.11:697,63,0	1/1:2,14:16:42.12:476,42,0	0/0:26,0:26:78.23:0,78,1034	0/0:26,0:26:66.21:0,66,886	0/0:30,0:30:90.29:0,90,1215	0/0:8,0:8:21.07:0,21,287
chr10	72177877	.	A	AATGCCAGCAGGATGGGGCCAGAGTGT	42945.05	PASS	AB=0.646;AC=54;AF=0.964;AN=56;BaseQRankSum=-1.632;DP=315;FS=16.712;HRun=0;HaplotypeScore=244.6698;InbreedingCoeff=-0.0512;MQ=60.09;MQ0=0;MQRankSum=-2.912;QD=136.33;ReadPosRankSum=1.908;VQSLOD=3.2255;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:14.99:707,15,0	1/1:4,0:4:12.04:1033,12,0	0/1:4,1:8:29.34:1270,0,29	0/1:2,0:5:15.29:246,0,15	1/1:15,0:15:11.95:328,12,0	1/1:6,0:6:18.06:1110,18,0	1/1:18,0:18:51.14:3232,51,0	1/1:14,0:14:42.14:2849,42,0	1/1:17,0:17:43.94:3054,44,0	1/1:8,0:8:21.96:1856,22,0	1/1:13,0:13:15.39:289,15,0	1/1:16,0:16:48.16:3182,48,0	1/1:16,0:16:36.59:1954,37,0	1/1:6,0:6:3.01:219,3,0	1/1:14,0:14:39.09:2259,39,0	1/1:10,0:10:30.07:2214,30,0	1/1:13,0:13:33.07:2424,33,0	1/1:10,0:10:27.09:2106,27,0	1/1:9,0:9:27.08:1538,27,0	1/1:13,0:13:24:1112,24,0	1/1:6,0:6:12:602,12,0	1/1:20,0:20:36.04:2160,36,0	1/1:18,0:18:30.02:1693,30,0	1/1:11,0:11:14.97:369,15,0	1/1:14,0:14:39.12:2395,39,0	1/1:8,0:8:21.07:842,21,0	1/1:9,0:9:23.40:1142,23,0	1/1:3,0:3:9.03:759,9,0
chr10	72180853	.	C	CTGTT	9029.09	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-1.454;DP=700;FS=10.029;HRun=0;HaplotypeScore=127.2395;InbreedingCoeff=0.9994;MQ=72.69;MQ0=0;MQRankSum=-4.329;QD=52.19;ReadPosRankSum=1.867;VQSLOD=6.0814;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:29:60.16:1468,60,0	0/0:11,0:11:30.10:0,30,524	0/0:38,0:32:35.68:0,36,456	0/0:18,0:16:30.10:0,30,512	0/0:22,0:22:60.20:0,60,1031	0/0:12,0:12:27.05:0,27,444	0/0:23,0:23:54.14:0,54,916	0/0:41,0:41:82.54:0,83,1378	0/0:25,0:25:60.21:0,60,1054	0/0:24,0:24:60.21:0,60,1060	0/0:29,0:29:78.24:0,78,1321	1/1:8,11:20:42.14:997,42,0	1/1:7,8:15:27.09:684,27,0	0/0:26,0:26:72.23:0,72,1244	0/0:33,0:33:81.28:0,81,1430	0/0:28,0:28:72.25:0,72,1272	0/0:25,0:25:63.22:0,63,1112	1/1:4,22:27:54.18:1353,54,0	0/0:27,0:27:57.18:0,57,929	0/0:22,0:22:57.19:0,57,1007	0/0:16,0:16:33.11:0,33,583	1/1:4,20:24:57.19:1439,57,0	1/1:9,19:28:66.19:1548,66,0	1/1:9,19:28:66.20:1540,66,0	0/0:26,0:26:69.24:0,69,1219	0/0:34,0:34:87.28:0,87,1484	0/0:30,0:30:84.28:0,84,1455	0/0:16,0:15:48.16:0,48,848
chr10	72180868	.	GT	G	3838.11	PASS	AB=0.897;AC=19;AF=0.339;AN=56;BaseQRankSum=11.436;DP=672;FS=8.986;HRun=10;HaplotypeScore=100.2671;InbreedingCoeff=0.9233;MQ=73.65;MQ0=0;MQRankSum=0.386;QD=16.83;ReadPosRankSum=4.730;VQSLOD=3.4729;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:63.12:0,63,678	0/0:10,0:10:24.06:0,24,266	0/0:31,0:23:34.86:0,35,358	0/0:19,0:14:26.54:0,27,223	0/0:25,1:26:46.10:0,46,706	0/0:11,0:11:32.71:0,33,315	0/0:25,1:26:43.12:0,43,685	0/0:33,0:33:81.19:0,81,874	0/0:24,0:24:61.61:0,62,650	1/1:2,21:23:62.98:547,63,0	1/1:3,27:30:71.98:625,72,0	1/1:1,18:19:41.96:352,42,0	1/1:4,11:15:26.98:229,27,0	0/0:28,0:28:71.95:0,72,759	0/0:35,0:35:76.71:0,77,817	0/1:23,3:26:5.95:6,0,617	1/1:5,16:21:38.98:338,39,0	0/0:25,0:24:53.94:0,54,558	0/0:19,1:20:24.97:0,25,476	0/0:25,0:25:63.15:0,63,679	0/0:14,1:15:7.47:0,7,280	1/1:9,13:22:44.92:375,45,0	1/1:9,13:23:44.38:360,44,0	1/1:3,20:23:47.75:408,48,0	1/1:1,25:26:68.98:599,69,0	0/0:35,2:37:50.24:0,50,985	0/0:32,0:34:95.92:0,96,1013	0/0:17,0:15:48.13:0,48,531
chr10	72183346	.	C	CT	680.05	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=5.416;DP=502;FS=2.724;HRun=8;HaplotypeScore=84.8665;InbreedingCoeff=0.5675;MQ=84.14;MQ0=9;MQRankSum=-1.402;QD=6.42;ReadPosRankSum=-0.950;VQSLOD=0.9073;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:28,1:33:67.41:360,67,0	0/0:6,0:6:6:0,6,55	0/0:38,0:21:24.52:0,25,198	0/0:35,0:22:0.29:0,0,42	0/0:8,0:8:14.96:0,15,127	0/0:17,0:17:41.22:0,41,342	0/0:17,0:16:26.94:0,27,228	0/0:19,0:19:8.10:0,8,204	0/0:18,0:18:38.86:0,39,332	0/0:12,0:12:12.56:0,13,79	1/1:8,0:8:6.13:49,6,0	0/0:19,0:19:41.92:0,42,347	0/0:11,0:11:6.90:0,7,171	0/0:6,0:6:12.01:0,12,110	0/0:24,0:24:50.19:0,50,411	0/0:16,0:16:38.97:0,39,348	0/0:16,0:16:12.49:0,12,83	1/1:8,16:23:38.55:388,39,0	0/1:23,0:23:5.52:6,0,295	0/0:15,0:15:27.86:0,28,239	0/0:20,0:20:47.84:0,48,405	0/0:20,0:20:38.31:0,38,310	0/0:15,0:15:35.11:0,35,267	0/0:27,0:27:38.92:0,39,322	0/1:17,0:17:16.46:21,0,16	0/0:17,0:17:32.63:0,33,272	0/0:11,0:11:14.45:0,14,115	0/0:9,0:9:12:0,12,110
chr10	72183354	.	T	TGG	533.66	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-0.168;DP=488;FS=8.777;HRun=10;HaplotypeScore=85.3567;InbreedingCoeff=0.8944;MQ=76.77;MQ0=15;MQRankSum=-2.920;QD=8.89;ReadPosRankSum=-0.805;VQSLOD=0.6513;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:69.22:0,69,353	0/0:3,0:3:9.02:0,9,90	0/0:38,0:18:4.76:0,5,82	0/0:34,0:16:8.50:0,9,72	0/0:10,0:10:18.03:0,18,182	0/0:19,0:19:36.06:0,36,361	0/0:12,0:12:24.03:0,24,243	0/0:17,0:17:36.04:0,36,355	0/0:20,0:21:47.79:0,48,461	1/1:5,6:11:11.97:131,12,0	1/1:2,6:13:14.60:112,15,0	0/0:16,0:16:35.68:0,36,153	0/0:13,0:13:27.45:0,27,118	0/0:6,0:6:12:0,12,122	0/0:21,0:22:46.07:0,46,439	0/0:16,0:16:42.96:0,43,423	1/1:4,10:19:14.41:179,14,0	0/0:23,0:22:19.49:0,19,95	0/0:20,0:21:29.73:0,30,285	0/0:18,0:18:33.47:0,33,325	0/0:16,0:17:41.68:0,42,393	0/0:19,0:19:43.27:0,43,190	0/0:16,0:16:35.29:0,35,152	0/0:20,0:20:32.90:0,33,142	1/1:4,11:17:18.10:264,18,0	0/0:15,0:15:33.03:0,33,332	0/0:13,0:13:24.01:0,24,237	0/0:5,0:5:15.03:0,15,152
chr10	72183363	.	GGT	G	3538.12	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=6.580;DP=463;FS=3.209;HRun=0;HaplotypeScore=65.3985;InbreedingCoeff=0.8089;MQ=67.15;MQ0=17;MQRankSum=1.911;QD=19.99;ReadPosRankSum=3.760;VQSLOD=3.5879;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:34:81.01:779,81,0	0/0:6,0:6:17.82:0,18,214	0/0:29,0:11:7.14:0,7,140	0/1:28,0:9:3.86:4,0,29	0/0:8,0:8:18.06:0,18,317	0/0:16,0:16:42.11:0,42,649	0/0:9,0:8:24.08:0,24,427	0/0:16,0:16:44.97:0,45,705	0/0:20,0:20:57.07:0,57,932	0/0:9,0:8:17.96:0,18,190	0/0:13,0:13:18.73:0,19,170	1/1:0,17:17:39.13:555,39,0	1/1:0,13:13:30.10:425,30,0	0/0:6,0:6:15.05:0,15,258	0/0:19,0:19:51.02:0,51,843	0/0:16,0:16:48.10:0,48,800	0/0:17,0:17:15.04:0,15,176	0/1:29,0:27:94.98:100,0,95	0/0:19,0:18:47.96:0,48,645	0/0:14,0:14:35.79:0,36,622	0/0:17,0:16:45.92:0,46,755	1/1:2,16:18:46.66:616,47,0	1/1:1,15:16:39.05:527,39,0	1/1:0,20:20:39.08:531,39,0	0/0:15,0:15:29.99:0,30,302	0/0:17,0:17:51.09:0,51,720	0/0:12,0:12:30.09:0,30,521	0/0:7,0:7:21.04:0,21,326
chr10	72183364	.	GTT	G	1641.88	PASS	AB=0.978;AC=15;AF=0.268;AN=56;BaseQRankSum=9.657;DP=459;FS=0.000;HRun=2;HaplotypeScore=70.0365;InbreedingCoeff=0.7798;MQ=64.22;MQ0=18;MQRankSum=1.083;QD=8.78;ReadPosRankSum=3.936;VQSLOD=0.6376;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,3:34:43.12:337,43,0	0/0:6,0:6:18.01:0,18,260	0/1:26,0:9:15.78:16,0,84	0/1:27,0:7:2.30:2,0,31	0/0:8,0:8:18.06:0,18,323	0/0:16,0:16:44.40:0,44,652	0/0:9,0:8:24.08:0,24,420	0/0:15,0:15:45.10:0,45,746	0/0:20,0:20:57.18:0,57,970	0/0:9,0:8:13.52:0,14,202	0/1:13,0:13:1.58:2,0,159	1/1:17,0:17:38.81:338,39,0	1/1:13,0:13:29.75:231,30,0	0/0:6,0:6:15.03:0,15,241	0/0:19,0:19:51.17:0,51,873	0/0:16,0:16:48.15:0,48,823	0/0:16,0:16:14.26:0,14,151	0/0:28,0:27:34.03:0,34,262	0/0:19,0:17:44.89:0,45,689	0/0:15,0:15:38.57:0,39,656	0/0:18,0:17:48.62:0,49,814	1/1:17,0:18:41.20:322,41,0	1/1:15,1:16:38.52:285,39,0	1/1:20,0:20:38.68:297,39,0	0/0:15,0:15:27.80:0,28,311	0/0:17,0:17:51.07:0,51,803	0/0:12,0:12:30.57:0,31,531	0/0:7,0:7:21.07:0,21,363
chr10	72185833	.	C	CGCGTGTGT	2414.94	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=1.886;DP=706;FS=9.733;HRun=0;HaplotypeScore=184.4017;InbreedingCoeff=0.0798;MQ=60.53;MQ0=2;MQRankSum=-5.479;QD=12.78;ReadPosRankSum=-2.749;VQSLOD=1.3507;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:14.32:0,14,119	0/0:9,0:9:23.84:0,24,393	0/0:28,0:18:26.22:0,26,393	0/1:30,0:21:8.47:8,0,296	0/0:28,0:28:57.05:0,57,1112	0/0:21,0:21:54.14:0,54,1245	0/0:31,0:31:78.12:0,78,1418	0/0:24,0:24:38.94:0,39,470	0/0:33,0:33:72.12:0,72,1348	1/1:26,0:26:23.16:1308,23,0	0/0:19,0:19:1:0,1,106	0/1:19,0:19:34.95:258,0,35	0/1:29,0:29:6.99:513,0,7	0/0:29,0:29:66.17:0,66,1425	0/0:37,0:37:84.22:0,84,1902	0/0:30,0:30:66.09:0,66,1484	0/1:22,0:22:94.41:94,0,161	0/1:26,0:26:75.23:75,0,173	0/0:29,0:29:27.07:0,27,455	0/0:15,0:15:30.05:0,30,514	0/0:48,0:48:99:0,108,2112	0/0:16,4:24:11.98:0,12,98	0/1:20,0:20:59.96:96,0,60	0/0:17,0:17:5.42:0,5,47	0/1:17,0:17:15.97:205,0,16	0/0:28,0:28:56.87:0,57,1171	0/0:24,0:24:45.05:0,45,1003	0/0:13,0:13:30.02:0,30,606
chr10	72185844	.	G	GTGTGTGCA	3653.80	PASS	AB=0.597;AC=19;AF=0.339;AN=56;BaseQRankSum=-6.161;DP=767;FS=8.906;HRun=0;HaplotypeScore=183.5255;InbreedingCoeff=0.7939;MQ=58.89;MQ0=4;MQRankSum=-4.249;QD=13.84;ReadPosRankSum=-0.775;VQSLOD=2.1090;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,21:37:0:0,0,0	0/0:10,0:10:21.05:0,21,403	0/0:43,0:24:23.25:0,23,265	0/0:42,0:24:11.18:0,11,257	0/0:27,0:27:54.12:0,54,1074	0/0:21,0:21:48.16:0,48,1188	0/0:30,0:30:57.12:0,57,1130	0/0:24,0:24:47.96:0,48,599	0/0:31,0:31:57.12:0,57,1201	1/1:3,26:31:66.15:1887,66,0	1/1:7,13:21:2.84:35,3,0	1/1:5,20:26:12.02:348,12,0	1/1:2,27:30:14.34:623,14,0	0/0:28,0:28:69.12:0,69,1414	0/0:40,0:40:90.12:0,90,1854	0/0:28,0:28:75.14:0,75,1573	1/1:14,8:25:8.77:237,9,0	1/1:12,16:28:3.01:125,3,0	0/0:24,0:23:17.79:0,18,279	0/0:16,0:16:30.50:0,30,502	0/0:46,0:46:99:0,108,2138	1/1:22,0:22:2.86:24,3,0	1/1:3,19:24:3.01:125,3,0	0/0:9,12:23:0.41:0,0,1	1/1:3,16:20:6.02:250,6,0	0/0:31,0:31:66.06:0,66,1300	0/0:26,0:26:59.91:0,60,1087	0/0:13,0:13:30.03:0,30,559
chr10	72188542	.	GA	G	6391.48	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.577;DP=735;FS=8.019;HRun=2;HaplotypeScore=88.8137;InbreedingCoeff=0.9971;MQ=57.86;MQ0=1;MQRankSum=-4.960;QD=35.71;ReadPosRankSum=1.729;VQSLOD=5.1062;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:32:87.17:1065,87,0	0/0:6,0:6:18.06:0,18,270	0/0:29,0:28:84.27:0,84,1191	0/0:19,0:17:48.16:0,48,706	0/0:34,0:34:99:0,99,1463	0/0:23,0:23:69.22:0,69,1012	0/0:22,0:22:66.21:0,66,967	0/0:30,0:30:90.29:0,90,1314	0/0:25,0:25:75.25:0,75,1123	0/0:34,0:34:99:0,102,1524	0/0:30,0:30:90.30:0,90,1348	1/1:3,25:28:78.25:1007,78,0	1/1:2,23:25:69.22:892,69,0	0/0:15,0:15:45.15:0,45,673	0/0:30,0:30:84.28:0,84,1259	0/0:20,0:20:54.17:0,54,789	0/0:25,0:25:72.20:0,72,1034	1/1:1,17:18:51.17:662,51,0	0/0:31,0:31:90.24:0,90,1250	0/0:29,0:29:87.29:0,87,1296	0/0:50,0:50:99:0,147,2203	1/1:1,28:29:87.28:1128,87,0	1/1:1,22:23:69.21:881,69,0	1/1:3,21:24:60.58:757,61,0	0/0:31,0:31:87.29:0,87,1303	0/0:30,0:30:87.29:0,87,1286	0/0:35,0:35:99:0,105,1540	0/0:7,0:7:18.06:0,18,270
chr10	72188605	.	ATC	A	7690.19	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=16.262;DP=743;FS=3.621;HRun=0;HaplotypeScore=96.1626;InbreedingCoeff=0.9985;MQ=58.39;MQ0=4;MQRankSum=-2.645;QD=40.91;ReadPosRankSum=0.921;VQSLOD=6.7692;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:78.26:1180,78,0	0/0:16,0:16:48.16:0,48,908	0/0:26,0:15:45.06:0,45,744	0/0:32,0:28:80.63:0,81,1443	0/0:29,0:29:84.25:0,84,1520	0/0:23,0:23:66.21:0,66,1230	0/0:18,0:18:54.15:0,54,957	0/0:34,0:34:99:0,102,1817	0/0:23,0:23:69.22:0,69,1277	0/0:24,0:24:69.22:0,69,1250	0/0:29,0:29:87.07:0,87,1483	1/1:2,24:26:75.07:1104,75,0	1/1:5,20:25:75.20:1043,75,0	0/0:25,0:25:72.22:0,72,1304	0/0:29,0:29:87.28:0,87,1627	0/0:25,0:25:72.25:0,72,1390	0/0:30,0:30:90.29:0,90,1682	1/1:3,20:23:60.65:893,61,0	0/0:30,0:29:87.30:0,87,1673	0/0:33,0:33:99:0,99,1900	0/0:38,0:38:99:0,111,2023	1/1:2,36:38:99:1561,111,0	1/1:2,17:19:54.18:803,54,0	1/1:5,23:28:78.03:1107,78,0	0/0:27,0:27:78.25:0,78,1463	0/0:31,0:31:90.31:0,90,1729	0/0:27,0:27:81.26:0,81,1509	0/0:6,0:6:18.06:0,18,343
chr10	72189114	.	C	CTTTTTTT	6046.48	PASS	AB=0.867;AC=15;AF=0.278;AN=54;BaseQRankSum=8.675;DP=242;FS=18.818;HRun=2;HaplotypeScore=74.1688;InbreedingCoeff=0.8067;MQ=64.77;MQ0=1;MQRankSum=-9.614;QD=74.65;ReadPosRankSum=-2.535;VQSLOD=1.1478;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:14,2:18:42.14:1380,42,0	0/0:3,0:4:6.02:0,6,147	0/0:12,0:9:21.97:0,22,568	0/0:9,0:6:18.06:0,18,383	1/1:3,0:3:0.94:3,1,0	0/0:7,0:7:21.07:0,21,495	0/0:16,0:16:26.08:0,26,633	0/0:8,0:8:18.05:0,18,396	0/0:7,0:7:18.06:0,18,438	0/0:4,0:4:6:0,6,147	./.	0/1:11,2:13:14.69:1171,0,15	1/1:10,0:10:24.05:646,24,0	0/0:7,0:7:21.07:0,21,513	0/0:6,0:6:18.06:0,18,442	0/0:8,0:8:21.07:0,21,516	0/0:8,0:8:21.07:0,21,480	1/1:5,4:9:24.08:740,24,0	0/0:8,0:8:21.07:0,21,502	0/0:8,0:8:12.02:0,12,232	0/0:11,0:10:15.05:0,15,368	1/1:7,3:12:36.11:1039,36,0	1/1:3,3:6:15.05:516,15,0	1/1:4,3:9:18.53:552,19,0	0/0:10,0:10:24.06:0,24,538	0/0:10,0:10:21.07:0,21,516	0/0:12,0:12:33.11:0,33,790	0/0:4,0:4:9.03:0,9,221
chr10	72189115	.	T	TTTTTTTTTC	6503.85	PASS	AB=0.867;AC=15;AF=0.278;AN=54;BaseQRankSum=5.546;DP=236;FS=20.650;HRun=0;HaplotypeScore=81.2368;InbreedingCoeff=0.7751;MQ=64.78;MQ0=1;MQRankSum=-9.841;QD=84.47;ReadPosRankSum=-3.062;VQSLOD=2.7591;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:15:42.14:1519,42,0	0/0:4,0:4:6.02:0,6,175	0/0:12,0:9:21.95:0,22,661	0/0:9,0:6:18.06:0,18,450	1/1:3,0:3:0.94:3,1,0	0/0:7,0:7:21.07:0,21,593	0/0:16,0:16:29.01:0,29,745	0/0:8,0:8:18.05:0,18,471	0/0:7,0:7:18.06:0,18,530	0/0:3,0:3:6.01:0,6,177	./.	0/1:11,2:13:15.14:1292,0,15	1/1:7,3:10:24.05:670,24,0	0/0:7,0:7:21.07:0,21,605	0/0:6,0:6:18.06:0,18,533	0/0:8,0:8:21.07:0,21,619	0/0:8,0:8:21.07:0,21,571	1/1:9,0:9:24.08:813,24,0	0/0:8,0:8:21.07:0,21,570	0/0:9,0:9:1.10:0,1,256	0/0:9,0:8:15.05:0,15,444	1/1:12,0:12:36.10:1067,36,0	1/1:6,0:6:15.05:552,15,0	1/1:8,0:8:18.53:589,19,0	0/0:11,0:11:24.53:0,25,642	0/0:9,0:9:21.07:0,21,622	0/0:12,0:12:33.11:0,33,933	0/0:4,0:4:9.03:0,9,265
chr10	72190846	.	C	CTTT	911.71	PASS	AB=0.764;AC=18;AF=0.321;AN=56;BaseQRankSum=8.270;DP=288;FS=11.811;HRun=0;HaplotypeScore=74.4353;InbreedingCoeff=0.6470;MQ=53.37;MQ0=22;MQRankSum=-5.796;QD=19.82;ReadPosRankSum=5.055;VQSLOD=2.1213;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,1:4:12.02:121,12,0	0/0:4,0:4:12.04:0,12,215	0/0:49,0:12:26.77:0,27,397	0/0:71,0:22:19.29:0,19,489	0/0:8,0:7:14.87:0,15,266	0/0:5,0:5:12.04:0,12,214	0/0:13,0:12:30.10:0,30,518	0/0:6,0:6:18.02:0,18,289	0/0:9,0:9:18.03:0,18,254	1/1:3,2:3:9.03:122,9,0	1/1:0,4:4:12.04:178,12,0	0/1:3,1:3:2.96:40,0,3	1/1:4,1:4:4.35:51,4,0	0/0:8,0:7:12.30:0,12,138	0/0:11,0:9:15.55:0,16,207	0/0:7,0:6:12.04:0,12,210	1/1:1,3:4:1.58:126,2,0	0/0:8,0:7:14.41:0,14,256	0/0:12,1:11:30.07:0,30,478	0/0:2,0:2:3.01:0,3,53	0/0:9,0:9:10.26:0,10,213	1/1:2,2:3:6.02:92,6,0	0/1:5,3:7:32.95:144,0,33	1/1:0,1:2:3.01:34,3,0	1/1:0,4:4:12.04:183,12,0	0/0:9,0:9:22.63:0,23,379	0/0:9,0:9:18.06:0,18,312	0/0:1,0:1:3.01:0,3,54
chr10	72190859	.	C	CA	111.10	PASS	AB=0.856;AC=10;AF=0.185;AN=54;BaseQRankSum=-3.294;DP=326;FS=15.372;HRun=0;HaplotypeScore=73.7281;InbreedingCoeff=0.5293;MQ=40.77;MQ0=33;MQRankSum=0.455;QD=1.25;ReadPosRankSum=-0.930;VQSLOD=0.4475;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:23.44:0,23,155	./.	0/0:30,0:6:5.13:0,5,74	0/1:45,0:9:3.95:4,0,36	0/0:5,0:4:3:0,3,26	0/0:6,0:4:0:0,0,0	0/0:15,0:9:3.44:0,3,21	0/0:8,0:6:2.98:0,3,21	0/0:7,0:7:5.93:0,6,44	0/0:14,0:11:26.67:0,27,190	0/0:14,0:13:20.82:0,21,146	0/0:12,0:8:17.81:0,18,124	0/0:8,0:6:14.71:0,15,102	0/0:12,0:11:18.74:0,19,142	0/0:12,0:9:12.22:0,12,70	0/0:7,0:6:8.84:0,9,66	0/0:13,0:12:32.54:0,33,227	0/0:8,0:7:9.40:0,9,68	1/1:11,0:9:11.59:77,12,0	1/1:7,0:7:2.96:24,3,0	0/1:7,4:9:0:0,0,0	0/0:15,0:14:23.91:0,24,191	0/0:15,0:14:30.47:0,30,217	0/0:6,0:6:2.88:0,3,25	0/0:8,0:8:14.92:0,15,111	1/1:7,0:5:4.67:37,5,0	1/1:7,0:7:14.32:100,14,0	0/0:3,0:1:2.22:0,2,7
chr10	72191422	.	TG	T	3894.39	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.804;DP=603;FS=0.000;HRun=3;HaplotypeScore=92.9556;InbreedingCoeff=0.9990;MQ=74.78;MQ0=0;MQRankSum=-3.492;QD=32.73;ReadPosRankSum=2.596;VQSLOD=3.8176;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,35:36:93.29:1148,93,0	0/0:11,0:11:33.11:0,33,475	0/0:28,0:28:75.19:0,75,1011	0/0:25,0:25:69.05:0,69,928	0/0:22,0:22:63.18:0,63,881	0/0:21,0:21:60.20:0,60,864	0/0:22,0:22:66.21:0,66,933	0/0:27,0:27:75.23:0,75,1034	0/0:14,0:14:42.14:0,42,605	0/0:25,0:25:69.22:0,69,967	0/0:7,0:7:21.03:0,21,279	1/1:1,20:21:57.18:706,57,0	1/1:2,14:16:42.13:519,42,0	0/0:19,0:19:57.18:0,57,804	0/0:16,0:16:48.16:0,48,690	0/0:18,0:18:51.16:0,51,714	0/0:36,0:36:99:0,108,1537	0/0:28,0:28:84.28:0,84,1210	0/0:21,0:20:57.18:0,57,803	0/0:17,0:17:51.17:0,51,734	0/0:53,0:53:99:0,153,2144	1/1:1,14:15:36.11:446,36,0	1/1:1,10:11:33.10:406,33,0	1/1:1,19:20:54.17:669,54,0	0/0:16,0:16:48.15:0,48,674	0/0:24,0:24:72.23:0,72,1020	0/0:21,0:21:63.21:0,63,905	0/0:13,0:13:39.13:0,39,561
chr10	72191724	.	G	GATAT	716.53	PASS	AB=1.000;AC=10;AF=0.192;AN=52;BaseQRankSum=3.950;DP=341;FS=7.665;HRun=0;HaplotypeScore=60.7820;InbreedingCoeff=0.6304;MQ=84.07;MQ0=2;MQRankSum=-0.791;QD=10.69;ReadPosRankSum=0.707;VQSLOD=1.5193;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,8:12:15.05:347,15,0	0/0:7,0:7:21.07:0,21,349	0/0:22,0:13:10.73:0,11,152	0/1:37,0:18:28.29:28,0,61	0/0:12,0:12:33.08:0,33,535	0/0:19,0:19:51.12:0,51,817	0/0:10,0:10:21.07:0,21,357	0/0:30,0:30:78.25:0,78,1284	0/0:16,0:16:33.10:0,33,533	0/0:12,0:12:29.97:0,30,316	0/1:4,0:4:12.95:13,0,90	1/1:0,7:7:12.04:300,12,0	1/1:4,1:5:6.01:100,6,0	0/0:12,0:12:30.10:0,30,513	0/0:8,0:8:21.07:0,21,363	0/0:9,0:9:18.06:0,18,304	0/0:20,0:20:48.14:0,48,561	0/0:8,0:8:24.06:0,24,380	0/0:14,0:14:30.08:0,30,462	0/0:7,0:7:21.07:0,21,357	0/0:2,0:2:6.02:0,6,104	1/1:1,1:2:3.01:75,3,0	./.	./.	0/0:10,0:10:27.07:0,27,305	0/0:18,0:18:51.17:0,51,867	0/0:20,0:20:57.19:0,57,942	0/0:15,0:15:33.10:0,33,542
chr10	72192094	.	T	TA	2471.67	PASS	AB=0.969;AC=21;AF=0.375;AN=56;BaseQRankSum=10.312;DP=495;FS=0.000;HRun=11;HaplotypeScore=71.7919;InbreedingCoeff=0.8853;MQ=74.37;MQ0=0;MQRankSum=-1.539;QD=12.61;ReadPosRankSum=0.765;VQSLOD=3.5317;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,41:47:69.20:862,69,0	0/0:7,0:8:19.92:0,20,141	0/1:30,1:19:8.33:8,0,103	0/0:21,0:21:28.88:0,29,173	0/0:18,0:18:44.69:0,45,339	0/0:22,0:23:58.78:0,59,447	0/0:19,0:19:56.74:0,57,435	0/0:31,0:31:71.68:0,72,554	0/0:16,0:16:35.84:0,36,279	1/1:1,0:13:34.20:176,34,0	1/1:2,1:10:23:132,23,0	1/1:6,8:14:30.06:302,30,0	1/1:3,5:9:14.86:136,15,0	0/0:11,0:12:26.26:0,26,193	0/0:22,0:22:59.76:0,60,462	0/0:15,0:15:35.81:0,36,273	1/1:5,1:25:49.61:244,50,0	0/0:14,0:16:34.90:0,35,261	0/0:18,0:18:41.78:0,42,321	0/0:20,0:21:49.83:0,50,377	0/0:21,0:21:56.76:0,57,438	1/1:1,8:9:21:202,21,0	1/1:4,7:11:0.76:177,1,0	1/1:6,14:20:18.98:373,19,0	1/1:4,0:7:11.53:72,12,0	0/0:13,0:13:29.88:0,30,232	0/0:15,0:15:32.83:0,33,255	0/0:7,0:7:17.93:0,18,139
chr10	72193102	.	T	TTTCCTTCC	7108.65	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=12.765;DP=598;FS=8.896;HRun=0;HaplotypeScore=177.3573;InbreedingCoeff=0.9644;MQ=62.53;MQ0=3;MQRankSum=-12.244;QD=29.01;ReadPosRankSum=-0.403;VQSLOD=3.9746;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,24:37:27.98:1065,28,0	0/0:13,0:13:24.05:0,24,521	0/0:20,0:13:5.98:0,6,65	0/0:20,0:15:9.03:0,9,200	0/0:13,0:13:30.10:0,30,732	0/0:13,0:13:12.04:0,12,768	0/0:29,0:29:54.17:0,54,1221	0/0:30,0:29:27.08:0,27,608	0/0:26,0:26:54.19:0,54,1350	1/1:32,0:32:39.10:740,39,0	1/1:11,0:10:27.09:485,27,0	1/1:21,0:21:32.85:561,33,0	1/1:19,0:19:30.08:601,30,0	0/0:20,0:20:39.13:0,39,977	0/0:25,0:25:54.19:0,54,1329	0/0:26,0:26:45.14:0,45,1035	1/1:19,0:19:20.96:434,21,0	1/1:20,0:20:18.04:429,18,0	0/0:23,0:23:27.09:0,27,681	0/0:16,0:16:33.11:0,33,746	0/0:34,0:34:72.22:0,72,1523	1/1:22,0:21:45.09:835,45,0	1/1:19,0:19:39.01:703,39,0	1/1:23,0:22:21.01:335,21,0	1/1:20,0:20:48.08:919,48,0	0/0:15,0:15:27.08:0,27,599	0/0:23,0:22:45.15:0,45,1038	0/0:7,0:7:12.04:0,12,285
chr10	72193131	.	TCTC	T	1941.16	PASS	AB=0.829;AC=11;AF=0.196;AN=56;BaseQRankSum=10.129;DP=575;FS=11.874;HRun=0;HaplotypeScore=122.0458;InbreedingCoeff=-0.2416;MQ=46.28;MQ0=20;MQRankSum=-8.097;QD=9.07;ReadPosRankSum=-2.352;VQSLOD=2.1933;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:37:5.70:6,0,392	0/0:8,0:8:24.08:0,24,582	0/0:40,0:5:15.05:0,15,319	0/0:32,0:5:12.04:0,12,284	0/0:13,0:12:36.12:0,36,884	0/0:22,0:21:66.23:0,66,1540	0/0:28,0:27:78.25:0,78,1762	0/0:26,0:25:58.72:0,59,1442	0/0:22,0:22:66.23:0,66,1596	0/1:19,3:25:99:158,0,606	0/1:7,3:12:43.68:296,0,44	0/1:9,5:15:99:192,0,337	0/1:7,4:13:99:204,0,245	0/0:17,0:17:51.18:0,51,1233	0/0:22,0:22:66.23:0,66,1626	0/0:19,0:19:57.20:0,57,1349	0/1:14,1:15:78.85:79,0,440	0/1:8,3:10:99:108,0,291	0/0:17,0:16:45.15:0,45,1050	0/0:13,0:13:39.13:0,39,886	0/0:34,0:33:90.28:0,90,1963	0/1:11,5:19:99:210,0,495	0/1:12,5:21:99:320,0,369	0/1:15,6:22:99:128,0,186	0/1:9,6:20:99:387,0,321	0/0:18,0:18:54.19:0,54,1229	0/0:23,0:22:69.24:0,69,1633	0/0:6,0:6:18.06:0,18,393
chr10	72193158	.	C	CTTCCTCCTCCTC	3173.08	PASS	AB=0.951;AC=14;AF=0.269;AN=52;BaseQRankSum=8.972;DP=463;FS=14.453;HRun=0;HaplotypeScore=194.6568;InbreedingCoeff=0.4907;MQ=43.81;MQ0=24;MQRankSum=-9.149;QD=18.89;ReadPosRankSum=-2.806;VQSLOD=1.3681;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:20:21.76:150,0,22	0/0:5,0:4:8.98:0,9,317	0/0:19,0:1:3.01:0,3,69	./.	0/0:17,0:16:35.85:0,36,801	0/0:18,0:16:48.03:0,48,1151	0/0:17,0:16:34.93:0,35,1043	0/0:18,0:16:33.39:0,33,498	0/0:15,0:15:42.04:0,42,1177	1/1:13,14:30:39.28:1080,39,0	./.	0/1:10,0:11:54.12:275,0,54	1/1:10,0:8:6.95:85,7,0	0/0:17,0:16:42.12:0,42,1246	0/0:21,0:20:54.10:0,54,1489	0/0:19,0:19:49.14:0,49,1460	1/1:23,0:22:36.05:814,36,0	0/0:10,0:9:8.29:0,8,210	0/0:16,0:14:33.03:0,33,842	0/0:9,0:9:27.07:0,27,781	0/0:24,0:23:50.99:0,51,1529	1/1:16,0:18:3.37:251,3,0	0/1:16,0:17:70.35:240,0,70	0/1:15,0:16:12.59:13,0,57	1/1:20,0:20:7.29:432,7,0	0/0:19,0:18:30:0,30,1052	0/0:20,0:20:53.97:0,54,1575	0/0:5,0:5:15:0,15,288
chr10	72193169	.	TTC	T	607.11	PASS	AB=0.928;AC=17;AF=0.327;AN=52;BaseQRankSum=1.611;DP=439;FS=9.015;HRun=0;HaplotypeScore=86.7575;InbreedingCoeff=0.5473;MQ=46.21;MQ0=21;MQRankSum=1.587;QD=4.19;ReadPosRankSum=0.478;VQSLOD=1.6748;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:23.33:0,23,209	0/0:10,0:9:9.02:0,9,100	./.	./.	0/0:14,0:14:8.85:0,9,114	1/1:18,0:17:11.06:105,11,0	0/1:13,5:17:27.03:27,0,39	0/0:18,0:16:5.95:0,6,42	0/0:13,0:13:15.03:0,15,195	0/0:24,0:24:37.55:0,38,354	0/0:5,0:5:2.58:0,3,10	1/1:7,3:10:15.03:159,15,0	1/1:5,2:5:8.08:97,8,0	0/0:20,0:19:18.06:0,18,264	0/1:24,0:23:5.91:6,0,332	0/0:23,0:23:32.27:0,32,388	0/0:18,0:19:19.24:0,19,190	1/1:9,0:8:6.02:66,6,0	0/0:14,0:12:9.03:0,9,135	0/0:12,0:12:9:0,9,114	0/0:31,0:28:24.06:0,24,313	1/1:8,1:9:6.02:66,6,0	1/1:15,1:16:9.02:97,9,0	1/1:7,7:14:11.86:110,12,0	0/0:18,0:17:5.95:0,6,44	0/0:20,0:18:9.20:0,9,246	0/1:19,0:19:47.86:48,0,128	0/0:6,0:6:2.99:0,3,23
chr10	72193697	.	T	TTTCTTTTTCTTTTTC	4001.11	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-2.247;DP=660;FS=9.916;HRun=0;HaplotypeScore=267.2639;InbreedingCoeff=0.7118;MQ=52.26;MQ0=27;MQRankSum=-0.449;QD=20.84;ReadPosRankSum=1.352;VQSLOD=0.9916;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,4:27:49.61:1441,50,0	0/0:11,0:10:28.40:0,28,419	0/0:53,0:18:19.50:0,20,159	0/0:59,0:11:16.55:0,17,90	0/0:32,0:31:73.18:0,73,1234	0/0:19,0:19:52.26:0,52,777	0/0:16,0:16:29.85:0,30,615	0/0:34,0:34:60.37:0,60,562	0/0:19,0:19:46.41:0,46,896	0/1:38,0:34:99:101,0,764	0/1:13,0:13:16.84:17,0,390	1/1:15,0:16:22.68:510,23,0	1/1:22,0:21:13.79:420,14,0	0/0:12,0:12:27.32:0,27,340	0/0:13,0:13:38.48:0,38,499	0/0:16,0:15:41.63:0,42,799	0/0:38,0:38:7.38:0,7,1450	0/0:23,0:22:38.95:0,39,653	0/0:22,0:20:20.17:0,20,553	0/0:23,0:22:8.31:0,8,796	0/0:10,0:9:19.67:0,20,211	1/1:14,0:15:18.06:609,18,0	1/1:28,0:27:25.42:672,25,0	1/1:8,0:8:13.22:228,13,0	0/1:23,0:23:3.78:4,0,743	0/0:24,0:23:54.09:0,54,681	0/0:29,0:28:49.54:0,50,1205	0/0:15,0:13:16.55:0,17,322
chr10	72194051	.	T	TA	10823.30	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=16.965;DP=738;FS=7.556;HRun=2;HaplotypeScore=98.6579;InbreedingCoeff=0.9999;MQ=81.82;MQ0=0;MQRankSum=-2.154;QD=37.58;ReadPosRankSum=2.984;VQSLOD=4.9958;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,47:48:99:1901,132,0	0/0:10,0:10:30.09:0,30,372	0/0:17,0:17:44.50:0,45,528	0/0:23,0:23:60.01:0,60,724	0/0:27,0:27:72.21:0,72,879	0/0:18,0:18:48.13:0,48,581	0/0:42,0:42:99:0,123,1511	0/0:37,0:37:99:0,99,1205	0/0:20,0:20:60.19:0,60,744	1/1:3,29:32:83.97:1204,84,0	1/1:1,21:22:60.20:863,60,0	1/1:2,27:29:81.27:1167,81,0	1/1:3,25:28:75.25:1080,75,0	0/0:23,0:23:69.22:0,69,854	0/0:31,0:31:87.27:0,87,1078	0/0:21,0:21:60.19:0,60,744	1/1:2,32:34:90.30:1295,90,0	0/0:21,0:21:54.17:0,54,669	0/0:24,0:24:66.21:0,66,818	0/0:22,0:22:66.21:0,66,817	0/0:41,0:41:99:0,123,1484	1/1:2,17:19:45.15:648,45,0	1/1:1,23:24:63.78:945,64,0	1/1:2,28:30:69.23:994,69,0	1/1:3,19:22:51.17:726,51,0	0/0:29,1:30:38.03:0,38,913	0/0:21,0:21:63.16:0,63,752	0/0:22,0:22:66.21:0,66,817
chr10	72194747	.	A	AAG	10871.82	PASS	AB=0.941;AC=21;AF=0.375;AN=56;BaseQRankSum=-8.248;DP=724;FS=3.197;HRun=0;HaplotypeScore=91.1083;InbreedingCoeff=0.9338;MQ=75.49;MQ0=2;MQRankSum=-0.089;QD=42.97;ReadPosRankSum=5.118;VQSLOD=6.7431;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,40:43:99:1910,102,0	0/0:12,0:12:30.10:0,30,441	0/0:50,0:34:77.43:0,77,1022	0/0:71,0:43:64.29:0,64,974	0/0:22,0:22:60.20:0,60,883	0/0:28,0:28:84.28:0,84,1235	0/0:19,0:19:57.17:0,57,799	0/0:41,0:41:99:0,114,1624	0/0:26,0:26:72.22:0,72,1023	1/1:0,22:22:66.21:1192,66,0	1/1:0,24:24:69.24:1269,69,0	1/1:1,21:22:48.16:899,48,0	1/1:1,26:27:65.98:1235,66,0	0/0:19,0:19:57.17:0,57,817	0/0:24,0:24:66.21:0,66,954	0/0:21,0:21:63.21:0,63,926	1/1:1,23:24:57.20:1067,57,0	0/0:26,0:26:75.23:0,75,1083	0/0:16,0:16:45.14:0,45,635	0/0:27,0:27:75.25:0,75,1104	0/0:19,0:19:54.18:0,54,795	1/1:1,15:16:39.13:710,39,0	1/1:1,13:14:30.10:561,30,0	1/1:0,29:29:66.23:1235,66,0	1/1:2,14:16:42.14:787,42,0	0/1:15,1:16:8.05:8,0,615	0/0:24,0:24:69.20:0,69,971	0/0:26,0:26:69.20:0,69,975
chr10	72195003	.	C	CT	3519.96	PASS	AB=0.667;AC=19;AF=0.339;AN=56;BaseQRankSum=-1.097;DP=587;FS=0.787;HRun=8;HaplotypeScore=80.4249;InbreedingCoeff=0.9172;MQ=68.97;MQ0=3;MQRankSum=-3.905;QD=17.60;ReadPosRankSum=1.089;VQSLOD=3.6167;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:34:37.98:181,38,0	0/0:10,0:10:27.01:0,27,247	0/0:29,0:20:39.67:0,40,371	0/0:26,0:14:26.07:0,26,200	0/0:17,0:17:45.02:0,45,411	0/0:21,0:21:54.02:0,54,494	0/0:23,0:23:69.02:0,69,626	0/0:38,0:38:69.86:0,70,632	0/0:12,0:12:27.01:0,27,247	1/1:3,21:24:63.13:701,63,0	1/1:4,18:23:48.14:551,48,0	1/1:12,0:17:18.98:209,19,0	1/1:5,0:7:17.36:104,17,0	0/0:12,0:12:33.02:0,33,302	0/0:21,0:21:54.01:0,54,490	0/0:18,0:18:41.25:0,41,383	1/1:2,30:32:84.25:969,84,0	0/0:37,0:37:99:0,105,955	0/0:29,0:28:60.02:0,60,549	0/0:22,0:22:60.03:0,60,549	0/0:8,0:8:21:0,21,192	1/1:11,0:14:17.29:117,17,0	1/1:9,1:19:32.49:217,32,0	0/1:7,0:13:11.44:89,0,11	1/1:1,13:14:33.10:381,33,0	0/0:23,1:24:13.38:0,13,374	0/0:19,0:19:57.03:0,57,521	0/0:21,0:21:63.03:0,63,577
chr10	72195017	.	TC	T	1853.31	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.988;DP=579;FS=6.683;HRun=1;HaplotypeScore=79.6627;InbreedingCoeff=0.9888;MQ=65.37;MQ0=5;MQRankSum=-8.146;QD=16.55;ReadPosRankSum=-1.447;VQSLOD=3.0891;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,33:40:48.99:568,49,0	0/0:7,0:7:21.05:0,21,246	0/0:27,0:16:22.87:0,23,348	0/0:25,0:11:13.42:0,13,132	0/0:18,0:18:53.95:0,54,616	0/0:22,0:22:59.17:0,59,722	0/0:28,0:28:84.19:0,84,1001	0/0:38,0:38:99:0,101,1227	0/0:11,0:11:33.09:0,33,413	0/0:23,0:23:69.10:0,69,829	0/0:22,0:22:60.15:0,60,731	1/1:10,8:18:35.93:336,36,0	1/1:5,3:8:17.68:173,18,0	0/0:12,0:12:36.10:0,36,449	0/0:19,0:19:57.16:0,57,721	0/0:14,0:14:27.92:0,28,432	0/0:35,0:35:99:0,102,1302	0/0:33,0:33:99:0,99,1177	0/0:25,0:24:72.20:0,72,892	0/0:21,0:21:63.13:0,63,741	0/0:7,0:7:18.05:0,18,233	1/1:4,6:10:20.39:257,20,0	1/1:8,11:19:49.52:453,50,0	1/1:8,9:16:22.87:254,23,0	0/0:15,0:15:42.10:0,42,512	0/0:19,0:19:56.88:0,57,672	0/0:26,0:26:78.20:0,78,950	0/0:20,0:20:60.12:0,60,740
chr10	72196512	.	GC	G	56.06	PASS	AB=0.792;AC=10;AF=0.185;AN=54;BaseQRankSum=1.211;DP=146;FS=0.000;HRun=1;HaplotypeScore=21.9467;InbreedingCoeff=0.3093;MQ=54.88;MQ0=15;MQRankSum=-1.029;QD=3.74;ReadPosRankSum=-0.410;VQSLOD=-0.3136;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:9.02:0,9,110	0/0:1,0:1:2.98:0,3,22	0/0:21,0:2:6.02:0,6,87	0/0:23,0:3:8.99:0,9,109	0/0:2,0:2:3:0,3,25	0/0:7,0:6:11.84:0,12,129	0/0:6,0:6:17.53:0,18,197	0/0:8,0:6:14.77:0,15,171	0/0:3,0:3:6.02:0,6,96	1/1:0,1:1:3.01:35,3,0	1/1:0,1:1:3.01:37,3,0	0/1:2,1:3:27.61:28,0,33	0/1:4,1:4:10.37:10,0,88	0/0:4,0:3:6.02:0,6,96	0/0:3,0:3:9.03:0,9,134	0/0:5,0:5:12.04:0,12,192	1/1:0,2:2:3.01:37,3,0	1/1:3,0:3:5.60:38,6,0	0/0:5,0:4:11.89:0,12,100	0/0:4,0:4:9:0,9,118	0/0:10,0:10:23.98:0,24,300	./.	0/0:3,0:3:6.02:0,6,95	0/0:12,0:12:7.71:0,8,31	0/0:2,1:2:2.92:0,3,17	0/0:5,0:5:12.03:0,12,139	0/0:1,0:1:3.01:0,3,48	0/0:1,0:1:3.01:0,3,37
chr10	72196514	.	G	GGTGT	497.92	PASS	AB=0.857;AC=16;AF=0.364;AN=44;BaseQRankSum=-0.139;DP=175;FS=0.000;HRun=0;HaplotypeScore=39.1177;InbreedingCoeff=0.5175;MQ=52.41;MQ0=16;MQRankSum=-0.788;QD=11.58;ReadPosRankSum=0.158;VQSLOD=2.2645;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:3,0:5:6.97:16,0,7	0/0:2,0:2:3.01:0,3,42	./.	./.	0/0:2,0:2:3.01:0,3,43	0/0:9,0:8:11.94:0,12,107	0/0:9,0:9:24.02:0,24,282	0/0:11,0:9:5.81:0,6,75	0/0:5,0:5:8.77:0,9,106	1/1:1,0:1:3.01:65,3,0	1/1:2,0:2:3.01:35,3,0	1/1:4,0:4:3.01:62,3,0	1/1:5,0:4:9.03:186,9,0	0/0:5,0:4:6.02:0,6,95	0/0:3,0:3:9.03:0,9,142	0/0:5,0:5:12.04:0,12,189	1/1:5,0:5:10.18:109,10,0	1/1:1,0:4:8.99:97,9,0	./.	0/0:4,0:4:6.02:0,6,95	0/0:10,0:10:12.03:0,12,170	./.	./.	1/1:3,10:13:3.01:71,3,0	0/1:4,0:3:0:0,0,0	0/0:5,0:5:3:0,3,28	0/0:3,0:3:6.47:0,6,72	./.
chr10	72199363	.	GCTA	G	295.67	PASS	AB=0.909;AC=8;AF=0.143;AN=56;BaseQRankSum=8.320;DP=425;FS=10.032;HRun=0;HaplotypeScore=159.8372;InbreedingCoeff=-0.1164;MQ=43.48;MQ0=6;MQRankSum=-5.180;QD=2.33;ReadPosRankSum=-2.785;VQSLOD=1.1846;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:23:28:0,28,1174	0/0:7,0:7:18.95:0,19,441	0/0:11,0:2:5.80:0,6,33	0/1:13,0:3:4.14:48,0,4	0/0:9,0:9:27.09:0,27,576	0/1:3,3:6:99:148,0,197	0/0:10,0:10:21.01:0,21,416	0/1:19,3:14:16.42:16,0,779	0/0:18,0:19:22.72:0,23,1076	0/1:16,1:16:49.21:49,0,607	0/1:5,2:7:68.47:68,0,203	0/0:13,0:13:32.91:0,33,724	0/0:30,0:29:65.97:0,66,1129	0/0:15,0:15:45.10:0,45,795	0/0:23,0:23:57.20:0,57,1309	0/0:13,0:13:30.09:0,30,601	0/0:22,0:22:37.62:0,38,846	0/0:10,0:11:30.40:0,30,563	0/0:11,0:11:22.16:0,22,423	0/0:4,0:4:12.04:0,12,276	0/0:21,0:21:52.99:0,53,1093	0/1:27,0:26:16.85:17,0,809	0/1:18,0:18:13.20:13,0,451	0/0:28,0:28:1.21:0,1,682	0/1:17,0:16:69.03:69,0,523	0/0:7,0:7:18.06:0,18,442	0/0:10,1:11:27.09:0,27,630	0/0:6,0:6:18.04:0,18,391
chr10	72199911	.	TGTG	T	80.40	PASS	AB=0.965;AC=4;AF=0.071;AN=56;BaseQRankSum=2.709;DP=601;FS=46.352;HRun=0;HaplotypeScore=173.6024;InbreedingCoeff=0.2153;MQ=44.77;MQ0=17;MQRankSum=-5.743;QD=1.28;ReadPosRankSum=-4.297;VQSLOD=-0.3965;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:1:2.90:16,3,0	0/0:5,0:5:9:0,9,106	0/0:36,0:8:14.27:0,14,358	0/0:36,0:15:22.79:0,23,422	0/0:12,0:12:16.14:0,16,321	0/0:15,0:15:25.91:0,26,402	0/0:27,1:26:55.20:0,55,764	0/0:24,0:13:29.96:0,30,364	0/0:27,0:26:75.68:0,76,1029	0/0:21,0:16:31.68:0,32,510	0/0:8,0:7:1.96:0,2,175	0/0:26,0:23:54.08:0,54,740	0/0:26,0:24:32.03:0,32,463	0/0:31,0:31:45.95:0,46,967	0/0:43,0:43:42.91:0,43,1347	0/0:37,0:36:61:0,61,1248	0/0:15,0:14:3.15:0,3,328	0/0:10,0:10:8.74:0,9,298	0/0:12,0:11:16.38:0,16,296	0/0:15,0:15:33.99:0,34,468	0/0:33,0:31:45.46:0,45,826	0/0:13,0:10:14.05:0,14,180	0/0:10,0:9:13.80:0,14,218	0/1:49,4:53:99:151,0,675	0/1:8,0:7:6.98:7,0,45	0/0:28,0:24:60.17:0,60,692	0/0:20,0:18:55.02:0,55,722	0/0:6,0:5:12.04:0,12,170
chr10	72199940	.	CTGT	C	4604.07	PASS	AB=0.804;AC=12;AF=0.214;AN=56;BaseQRankSum=9.196;DP=924;FS=14.965;HRun=0;HaplotypeScore=214.3980;InbreedingCoeff=0.7690;MQ=38.15;MQ0=28;MQRankSum=-8.015;QD=21.02;ReadPosRankSum=2.616;VQSLOD=3.6738;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,7:8:41.32:84,0,41	0/0:6,0:6:12.04:0,12,207	0/0:39,0:7:17.87:0,18,270	0/0:48,1:16:19.06:0,19,316	0/1:22,1:21:5.88:6,0,643	0/0:22,0:21:42.01:0,42,709	0/0:40,0:38:96.31:0,96,1797	0/0:38,0:34:87.28:0,87,1710	0/0:47,0:45:99:0,114,2283	0/0:52,0:42:92.36:0,92,1521	0/0:18,0:15:20.92:0,21,312	1/1:10,29:36:38.67:1076,39,0	1/1:3,36:39:78.06:1088,78,0	0/0:48,0:46:88.63:0,89,1962	0/0:67,0:67:99:0,137,3011	0/0:50,0:48:98.02:0,98,2100	0/0:16,0:15:21.61:0,22,494	0/0:19,0:19:3.89:0,4,833	0/0:16,0:13:26.34:0,26,548	0/0:31,0:31:71.54:0,72,1252	0/0:49,0:48:99:0,114,2124	1/1:12,10:17:30.08:373,30,0	1/1:5,10:12:27.09:384,27,0	1/1:23,42:65:34.51:1592,35,0	0/0:18,0:16:21.04:0,21,290	0/0:37,0:35:85.16:0,85,1661	0/0:33,0:32:77:0,77,1374	0/0:9,0:9:24.03:0,24,441
chr10	72200009	.	T	TTGC	1207.56	PASS	AB=0.971;AC=6;AF=0.115;AN=52;BaseQRankSum=4.970;DP=1092;FS=3.571;HRun=0;HaplotypeScore=179.1272;InbreedingCoeff=0.4976;MQ=38.24;MQ0=147;MQRankSum=-0.432;QD=15.09;ReadPosRankSum=1.955;VQSLOD=3.6052;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:22:36.08:0,36,478	0/0:15,0:10:24.04:0,24,345	./.	./.	0/0:21,0:15:17.89:0,18,210	0/0:22,0:17:32.94:0,33,463	0/0:62,0:56:99:0,111,1643	0/0:60,0:27:54.18:0,54,886	0/0:51,0:50:99:0,132,1898	0/1:30,2:22:99:230,0,218	1/1:5,2:6:6.02:138,6,0	0/0:70,0:62:99:0,153,2054	0/0:60,0:56:99:0,114,1446	0/0:60,0:58:99:0,168,2465	0/0:80,0:79:99:0,228,3419	0/0:63,0:61:99:0,171,2673	1/1:3,20:25:4.77:929,5,0	0/0:26,0:25:43.08:0,43,749	0/0:19,0:12:30.06:0,30,433	0/0:28,0:21:36.90:0,37,489	0/0:67,0:56:99:0,126,1670	0/0:28,0:22:21:0,21,292	0/0:18,0:16:20.86:0,21,230	0/0:70,0:68:99:0,118,1804	0/1:16,0:7:28.72:29,0,72	0/0:48,0:34:78.08:0,78,1106	0/0:35,0:31:93.16:0,93,1399	0/0:12,0:6:15.05:0,15,255
chr10	72200875	.	A	AGTGTGTGTGTGT	1765.38	PASS	AB=0.875;AC=8;AF=0.143;AN=56;BaseQRankSum=4.138;DP=854;FS=5.148;HRun=0;HaplotypeScore=311.7341;InbreedingCoeff=0.6868;MQ=58.31;MQ0=39;MQRankSum=-5.028;QD=15.22;ReadPosRankSum=-3.330;VQSLOD=0.7473;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:41.25:0,41,1332	0/0:14,0:14:27.08:0,27,799	0/0:58,0:21:21.07:0,21,466	0/0:70,0:34:26.16:0,26,630	0/0:24,0:24:52.40:0,52,1307	0/0:23,0:23:18.05:0,18,539	0/1:26,0:26:35.49:35,0,1126	0/0:33,0:33:45.04:0,45,1108	0/0:32,0:32:63.60:0,64,1702	1/1:29,0:27:54.15:1659,54,0	0/1:14,6:20:0.18:0,0,1	0/0:26,0:28:60.17:0,60,1823	0/0:23,0:23:51.05:0,51,1504	0/0:25,0:25:56.23:0,56,1831	0/0:38,0:38:89.89:0,90,2703	0/0:40,0:40:28.28:0,28,2157	1/1:11,0:15:3.48:149,3,0	0/0:15,0:15:26.93:0,27,680	0/0:19,0:18:33.04:0,33,853	0/0:32,0:31:45.15:0,45,1443	0/0:59,0:56:73.29:0,73,2044	0/0:31,0:31:57.19:0,57,1590	0/0:24,0:24:45.47:0,45,1453	0/0:43,0:44:62.48:0,62,2372	1/1:25,0:25:3.48:51,3,0	0/0:24,0:24:57.02:0,57,1788	0/0:30,0:30:63.21:0,63,2022	0/0:19,0:18:39.10:0,39,1054
chr10	72201185	.	TG	T	21050.43	PASS	AB=0.713;AC=54;AF=0.964;AN=56;BaseQRankSum=-4.933;DP=647;FS=1.397;HRun=3;HaplotypeScore=69.0108;InbreedingCoeff=-0.0371;MQ=73.70;MQ0=0;MQRankSum=-5.052;QD=32.54;ReadPosRankSum=3.519;VQSLOD=5.2557;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:69.22:855,69,0	1/1:1,15:16:48.15:594,48,0	0/1:6,11:14:89.90:292,0,90	0/1:6,2:9:49.58:52,0,50	1/1:1,30:31:90.28:1102,90,0	1/1:1,18:19:48.15:595,48,0	1/1:2,24:26:60.19:743,60,0	1/1:0,21:21:63.19:767,63,0	1/1:1,11:12:30.09:372,30,0	1/1:2,27:29:81.25:1004,81,0	1/1:0,18:18:45.14:553,45,0	1/1:0,26:26:72.23:893,72,0	1/1:1,16:17:45.14:549,45,0	1/1:2,25:27:72.23:893,72,0	1/1:0,32:32:93.29:1153,93,0	1/1:2,26:28:75.24:930,75,0	1/1:1,26:27:78.25:967,78,0	1/1:0,22:22:60.19:743,60,0	1/1:1,26:27:78.23:949,78,0	1/1:0,37:37:99:1258,102,0	1/1:0,24:24:69.22:855,69,0	1/1:0,28:28:81.25:990,81,0	1/1:1,27:28:72.13:892,72,0	1/1:1,17:18:45.14:558,45,0	1/1:1,20:21:54.17:669,54,0	1/1:0,24:24:69.22:854,69,0	1/1:0,25:25:54.17:669,54,0	1/1:0,10:10:24.08:298,24,0
chr10	72201695	.	T	TGCAC	1614.95	PASS	AB=0.846;AC=15;AF=0.268;AN=56;BaseQRankSum=0.697;DP=573;FS=19.819;HRun=0;HaplotypeScore=118.6138;InbreedingCoeff=0.3047;MQ=65.74;MQ0=16;MQRankSum=0.027;QD=7.88;ReadPosRankSum=-2.431;VQSLOD=0.7673;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:40.77:0,41,518	0/0:5,0:7:11.78:0,12,118	0/0:24,0:16:34.20:0,34,375	0/0:34,0:19:52.13:0,52,515	0/1:18,0:18:23.52:24,0,309	0/0:17,0:20:48.81:0,49,600	0/0:25,0:26:58.60:0,59,748	0/1:19,0:19:16.17:16,0,373	0/0:21,0:20:22.39:0,22,409	1/1:2,12:14:37.32:365,37,0	1/1:0,9:13:3.01:82,3,0	0/1:12,0:17:57.27:57,0,178	0/1:7,0:13:20.89:21,0,91	0/0:11,0:11:19.33:0,19,305	0/0:21,0:27:51.05:0,51,405	0/0:9,0:20:31.76:0,32,256	1/1:2,29:33:35.86:949,36,0	0/0:10,0:14:19.49:0,19,310	0/0:17,0:17:44.71:0,45,414	0/0:18,0:20:50.97:0,51,539	0/0:44,0:57:66.88:0,67,993	0/1:20,0:20:2.55:3,0,150	0/1:12,0:16:15.97:16,0,179	0/1:15,0:29:93.79:94,0,208	1/1:3,1:11:13.20:158,13,0	0/0:20,0:18:0.44:0,0,436	0/0:12,0:14:15.84:0,16,369	0/0:7,0:6:16.15:0,16,150
chr10	72202150	.	A	AGG	2795.36	PASS	AB=0.541;AC=13;AF=0.232;AN=56;BaseQRankSum=-3.829;DP=575;FS=0.000;HRun=9;HaplotypeScore=88.4425;InbreedingCoeff=0.9048;MQ=78.28;MQ0=1;MQRankSum=0.809;QD=17.92;ReadPosRankSum=-0.849;VQSLOD=2.0341;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,17:31:32.60:463,33,0	0/0:7,0:7:15:0,15,147	0/0:19,0:18:20.07:0,20,290	0/0:15,0:13:20.83:0,21,203	0/0:12,0:12:33.07:0,33,342	0/0:24,0:23:63.13:0,63,661	0/0:36,0:37:81.11:0,81,909	0/0:20,0:20:30.01:0,30,313	0/0:28,0:28:78.18:0,78,824	0/0:2,0:17:41.17:0,41,179	0/0:0,0:4:10.73:0,11,45	1/1:12,9:22:50.55:632,51,0	1/1:3,15:23:37.76:469,38,0	0/0:26,0:26:69.10:0,69,709	0/0:21,0:22:48.04:0,48,566	0/0:22,0:22:63.15:0,63,670	0/0:4,0:29:65.86:0,66,287	0/1:3,0:20:4.09:57,0,4	0/0:12,0:12:14.98:0,15,153	0/0:10,0:10:21.03:0,21,223	0/0:43,0:43:88.88:0,89,921	1/1:5,9:15:18.06:277,18,0	1/1:7,4:11:12.04:185,12,0	1/1:8,21:34:57.95:900,58,0	0/0:1,0:24:57.64:0,58,251	0/0:23,0:23:57.10:0,57,603	0/0:14,0:14:36.06:0,36,383	0/0:11,0:11:21.04:0,21,223
chr10	72202760	.	TG	T	1112.79	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.498;DP=747;FS=2.347;HRun=2;HaplotypeScore=77.5369;InbreedingCoeff=0.9939;MQ=82.55;MQ0=0;MQRankSum=-2.930;QD=35.90;ReadPosRankSum=0.598;VQSLOD=4.1555;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1750	0/0:8,0:8:24.08:0,24,360	0/0:21,0:21:58.68:0,59,765	0/0:27,0:27:70.42:0,70,959	0/0:19,0:19:57.19:0,57,851	0/0:21,0:21:63.21:0,63,943	0/0:27,0:27:81.27:0,81,1213	0/0:32,0:32:96.25:0,96,1322	0/0:21,0:21:63.21:0,63,943	0/0:31,0:31:93.27:0,93,1362	0/0:9,0:9:24.08:0,24,360	0/0:37,0:37:99:0,105,1553	0/0:34,0:34:99:0,102,1506	0/0:30,0:30:90.30:0,90,1347	0/0:56,0:56:99:0,169,2492	0/0:47,0:47:99:0,141,2112	0/0:24,0:24:66.22:0,66,989	1/1:0,31:31:93.30:1208,93,0	0/0:22,0:22:66.20:0,66,952	0/0:14,0:14:39.13:0,39,584	0/0:44,0:44:99:0,132,1941	0/0:15,0:15:39.12:0,39,565	0/0:9,0:9:24.08:0,24,360	0/0:29,0:29:84.28:0,84,1259	0/0:29,0:29:87.27:0,87,1265	0/0:31,0:31:90.30:0,90,1333	0/0:20,0:20:60.17:0,60,856	0/0:19,0:19:57.16:0,57,813
chr10	72204053	.	C	CAGAG	686.59	PASS	AB=0.940;AC=22;AF=0.524;AN=42;BaseQRankSum=-3.408;DP=513;FS=24.551;HRun=0;HaplotypeScore=104.8898;InbreedingCoeff=0.4175;MQ=61.04;MQ0=11;MQRankSum=0.894;QD=3.07;ReadPosRankSum=2.265;VQSLOD=-0.0182;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:39:21.50:0,21,154	./.	./.	./.	./.	0/1:21,0:20:0:0,0,0	0/0:26,0:25:11.99:0,12,157	1/1:20,0:19:0.94:2,1,0	0/0:8,5:15:0.94:0,1,2	1/1:15,0:15:6.91:82,7,0	./.	1/1:7,4:13:5.85:83,6,0	1/1:12,0:12:6.02:135,6,0	0/1:11,0:16:7.06:7,0,40	0/0:18,0:19:2.78:0,3,46	0/0:19,0:19:6.02:0,6,92	1/1:19,5:25:8.77:152,9,0	./.	0/1:12,0:12:0:0,0,0	./.	0/1:31,0:29:27.73:28,0,60	1/1:10,0:10:3.01:43,3,0	1/1:15,0:15:2.99:23,3,0	1/1:24,0:24:12.49:200,12,0	1/1:10,0:10:3.01:66,3,0	0/0:22,0:22:6.49:0,6,84	0/0:12,0:15:11.96:0,12,129	0/0:15,0:16:3:0,3,28
chr10	72204326	.	T	TAC	817.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.253;DP=737;FS=7.269;HRun=0;HaplotypeScore=107.6687;InbreedingCoeff=0.9913;MQ=63.91;MQ0=5;MQRankSum=0.071;QD=31.43;ReadPosRankSum=-0.472;VQSLOD=5.6075;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:47:99:0,111,1303	0/0:12,0:12:27.08:0,27,335	0/0:28,0:16:19.86:0,20,293	0/0:26,0:20:23.80:0,24,275	0/0:24,0:23:50.79:0,51,566	0/0:26,0:26:60.15:0,60,726	0/0:30,0:30:63.15:0,63,753	0/0:28,0:27:57.16:0,57,696	0/0:20,0:21:54:0,54,642	0/0:26,0:26:66.19:0,66,794	0/0:11,0:12:32.93:0,33,380	0/0:24,0:24:63.20:0,63,778	0/0:31,0:31:81.24:0,81,991	0/0:30,0:30:75.20:0,75,899	0/0:35,0:35:90.28:0,90,1111	0/0:32,0:32:75.19:0,75,909	0/0:24,0:25:56.98:0,57,654	1/1:4,22:26:57.19:912,57,0	0/0:22,0:23:54:0,54,643	0/0:25,0:25:54.12:0,54,649	0/0:30,0:32:74.89:0,75,864	0/0:27,0:29:60.02:0,60,718	0/0:24,0:24:57.18:0,57,705	0/0:28,0:30:73.29:0,73,857	0/0:20,0:20:51.12:0,51,614	0/0:24,0:24:45.14:0,45,557	0/0:28,0:29:57.88:0,58,669	0/0:17,0:17:45.14:0,45,557
chr10	72206318	.	AT	A	3023.26	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.574;DP=537;FS=13.284;HRun=4;HaplotypeScore=49.9757;InbreedingCoeff=0.9953;MQ=70.96;MQ0=0;MQRankSum=1.352;QD=31.17;ReadPosRankSum=3.509;VQSLOD=2.8953;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.19:0,57,797	0/0:13,0:13:39.08:0,39,505	0/0:9,1:9:19.25:0,19,282	0/0:8,0:8:21.05:0,21,249	0/0:37,0:37:99:0,108,1477	0/0:20,0:20:57.18:0,57,780	0/0:14,0:14:39.13:0,39,546	0/0:36,0:36:93.29:0,93,1259	0/0:9,0:9:27.09:0,27,376	1/1:2,18:20:54.17:648,54,0	1/1:0,26:26:75.15:881,75,0	0/0:15,0:15:42.14:0,42,587	0/0:20,0:20:60.20:0,60,839	0/0:13,0:13:39.13:0,39,546	0/0:18,0:17:54.16:0,54,721	0/0:16,0:16:48.15:0,48,654	1/1:0,30:30:81.25:971,81,0	0/0:21,0:21:60.14:0,60,784	0/0:23,0:23:66.22:0,66,924	0/0:25,0:25:75.21:0,75,1014	0/0:9,0:9:27.09:0,27,378	0/0:12,0:12:36.11:0,36,487	0/0:13,0:13:39.13:0,39,546	0/0:11,0:11:33.11:0,33,462	1/1:1,20:21:57.17:684,57,0	0/0:25,1:26:39.25:0,39,972	0/0:44,0:44:99:0,126,1745	0/0:8,0:8:21.07:0,21,294
chr10	72208574	.	CTCT	C	1975.12	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.593;DP=696;FS=12.266;HRun=0;HaplotypeScore=104.9745;InbreedingCoeff=0.9955;MQ=79.62;MQ0=0;MQRankSum=-4.810;QD=28.62;ReadPosRankSum=2.800;VQSLOD=3.3650;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,43:47:83.77:1347,84,0	0/0:13,0:13:39.12:0,39,815	0/0:19,0:19:47.34:0,47,874	0/0:25,0:25:60.20:0,60,1193	0/0:25,0:25:69.29:0,69,1442	0/0:27,0:26:78.27:0,78,1699	0/0:24,0:24:69.24:0,69,1498	0/0:26,0:26:66.23:0,66,1380	0/0:17,0:17:51.16:0,51,1047	0/0:25,0:25:72.25:0,72,1551	0/0:15,0:15:42.06:0,42,782	0/0:33,0:33:93.31:0,93,1963	0/0:28,0:28:84.27:0,84,1806	0/0:29,0:29:87.30:0,87,1886	0/0:34,0:34:96.33:0,96,2105	0/0:15,0:15:45.14:0,45,930	0/0:37,0:37:99:0,99,2095	1/1:0,22:22:48.16:750,48,0	0/0:19,0:19:57.19:0,57,1180	0/0:23,0:23:66.22:0,66,1376	0/0:58,0:58:99:0,166,3481	0/0:28,0:28:81.19:0,81,1661	0/0:18,0:18:51.16:0,51,1072	0/0:24,0:24:69.24:0,69,1501	0/0:27,0:27:66.21:0,66,1403	0/0:13,0:12:30.10:0,30,661	0/0:19,0:19:54.17:0,54,1147	0/0:6,0:6:18.06:0,18,351
chr10	72208610	.	AC	A	2993.75	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.547;DP=669;FS=2.599;HRun=2;HaplotypeScore=70.1647;InbreedingCoeff=0.9911;MQ=82.23;MQ0=0;MQRankSum=-0.814;QD=32.19;ReadPosRankSum=2.002;VQSLOD=3.6961;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:93.28:0,93,1356	0/0:9,0:9:27.09:0,27,404	0/0:18,0:18:51.17:0,51,764	0/0:27,0:27:78.23:0,78,1103	0/0:25,0:25:75.25:0,75,1124	0/0:21,0:21:63.21:0,63,944	0/0:28,0:28:81.26:0,81,1187	0/0:31,0:31:90.30:0,90,1330	0/0:16,0:16:48.16:0,48,718	1/1:0,21:21:60.19:778,60,0	1/1:1,17:18:45.15:584,45,0	0/0:31,0:31:90.30:0,90,1349	0/0:27,0:27:78.26:0,78,1169	0/0:30,0:30:90.29:0,90,1329	0/0:31,0:31:93.31:0,93,1376	0/0:13,0:13:36.12:0,36,539	1/1:0,36:36:90.29:1169,90,0	0/0:26,0:26:75.25:0,75,1124	0/0:21,0:21:63.20:0,63,924	0/0:21,0:21:60.20:0,60,897	0/0:45,0:45:99:0,129,1932	0/0:28,0:28:81.27:0,81,1213	0/0:20,0:20:57.19:0,57,854	0/0:27,0:27:81.27:0,81,1213	1/1:0,18:18:48.16:623,48,0	0/0:14,0:14:39.13:0,39,582	0/0:20,0:20:60.20:0,60,899	0/0:4,0:4:12.04:0,12,180
chr10	72209248	.	GTA	G	550.50	PASS	AB=0.924;AC=23;AF=0.426;AN=54;BaseQRankSum=8.113;DP=305;FS=1.330;HRun=0;HaplotypeScore=102.9844;InbreedingCoeff=0.3616;MQ=56.76;MQ0=0;MQRankSum=-7.997;QD=3.09;ReadPosRankSum=4.432;VQSLOD=1.4196;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:21.29:100,21,0	1/1:3,0:3:2.98:21,3,0	0/1:5,0:2:0:0,0,0	0/0:5,0:3:2.74:0,3,12	0/0:11,0:11:21.05:0,21,309	0/0:12,0:12:26.98:0,27,349	0/1:4,0:4:16.58:17,0,41	0/1:32,0:32:13.25:13,0,314	0/0:4,0:4:6.02:0,6,92	0/0:9,0:9:15.01:0,15,154	0/0:5,0:5:12.02:0,12,130	1/1:14,0:14:22.68:111,23,0	1/1:14,0:14:19.89:98,20,0	0/0:4,0:4:3.01:0,3,48	0/1:2,2:4:29.45:29,0,44	0/1:6,2:8:24.34:24,0,108	0/0:26,0:26:52.38:0,52,527	1/1:9,0:9:2.84:14,3,0	0/0:14,0:14:23.96:0,24,128	./.	0/0:8,0:8:17.15:0,17,107	1/1:8,0:8:11.36:56,11,0	1/1:21,0:21:33.70:159,34,0	1/1:7,0:7:2.84:14,3,0	0/0:12,0:12:12.02:0,12,135	0/1:19,0:19:47.36:47,0,83	0/0:13,0:13:19.74:0,20,131	0/1:12,0:12:24.85:25,0,68
chr10	72209258	.	ATATATATATGTGTGTGTGTGTGTGTG	A	9531.06	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=9.914;DP=284;FS=1.312;HRun=0;HaplotypeScore=194.0831;InbreedingCoeff=0.7421;MQ=54.90;MQ0=0;MQRankSum=-9.465;QD=117.67;ReadPosRankSum=6.449;VQSLOD=3.8933;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:16:0.24:2012,0,0	0/0:4,0:4:6.02:0,6,585	./.	0/0:5,0:2:3:0,3,25	0/0:10,0:10:27.08:0,27,2533	0/0:13,0:13:36.12:0,36,3483	0/0:5,0:5:15.05:0,15,909	0/0:30,0:30:87.29:0,87,5432	0/0:2,0:2:6.02:0,6,661	0/0:12,0:12:33.06:0,33,1952	0/0:6,0:6:18.06:0,18,1699	1/1:0,13:13:24.55:1705,25,0	1/1:1,8:10:21.07:1489,21,0	0/0:1,0:1:3.01:0,3,370	0/0:4,0:4:9.03:0,9,986	0/0:6,0:6:15.05:0,15,1377	0/0:24,0:24:66.20:0,66,4733	1/1:0,6:6:3.01:213,3,0	0/0:11,0:11:33.11:0,33,1850	0/0:6,0:6:6.01:0,6,120	0/0:10,0:10:18.06:0,18,1183	1/1:0,8:8:12.04:853,12,0	1/1:0,22:22:44.58:3047,45,0	1/1:2,4:6:3.01:213,3,0	0/0:14,0:14:27.08:0,27,2257	0/0:15,0:15:41.97:0,42,2565	0/0:12,0:12:21.07:0,21,1322	0/0:10,0:10:30.10:0,30,2428
chr10	72209266	.	ATGTG	A	2058.50	PASS	AB=1.000;AC=27;AF=0.500;AN=54;BaseQRankSum=8.119;DP=299;FS=8.034;HRun=0;HaplotypeScore=112.4397;InbreedingCoeff=0.7462;MQ=51.09;MQ0=2;MQRankSum=-6.287;QD=12.11;ReadPosRankSum=5.889;VQSLOD=1.8355;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:22.20:286,22,0	0/0:4,0:4:5.81:0,6,80	0/0:2,0:1:3.01:0,3,48	./.	0/0:10,0:10:24.08:0,24,529	0/0:15,0:15:36.12:0,36,734	0/0:8,0:8:15.05:0,15,250	0/0:35,0:35:52.63:0,53,788	0/0:4,0:4:12.04:0,12,240	0/0:9,0:9:16.92:0,17,251	0/0:10,0:9:20.96:0,21,208	1/1:13,0:13:24.03:226,24,0	1/1:9,0:9:21.02:196,21,0	0/0:2,0:2:6.02:0,6,120	0/0:6,0:6:12.01:0,12,212	0/0:7,0:7:18.06:0,18,343	0/1:24,0:23:9.78:10,0,409	1/1:6,0:6:3:28,3,0	1/1:7,4:11:12.04:191,12,0	1/1:1,6:7:3.01:37,3,0	1/1:6,6:12:6.02:97,6,0	1/1:8,0:8:12.01:112,12,0	1/1:22,0:22:42.16:422,42,0	1/1:5,0:5:3:28,3,0	0/0:14,0:14:17.67:0,18,220	1/1:7,5:12:18.94:252,19,0	1/1:5,11:16:5.99:97,6,0	1/1:5,5:10:17.82:279,18,0
chr10	72209704	.	G	GT	3545.78	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=12.725;DP=642;FS=8.435;HRun=6;HaplotypeScore=78.1145;InbreedingCoeff=0.8882;MQ=80.37;MQ0=0;MQRankSum=-1.248;QD=28.83;ReadPosRankSum=1.430;VQSLOD=4.1477;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.14:0,96,958	0/0:14,0:14:39.09:0,39,398	0/0:24,0:24:56.18:0,56,552	0/1:16,0:16:18.66:19,0,296	0/0:30,0:30:90.20:0,90,917	0/0:15,0:15:42.08:0,42,422	0/0:23,0:23:66.15:0,66,673	0/0:32,0:32:90.20:0,90,918	0/0:17,0:17:51.12:0,51,520	0/0:32,0:32:90.20:0,90,918	0/0:23,0:23:60.13:0,60,611	1/1:1,18:19:45.14:566,45,0	1/1:2,23:25:72.22:893,72,0	0/0:20,0:20:45.08:0,45,452	0/0:24,0:24:69.16:0,69,704	0/0:16,0:16:39.08:0,39,396	0/0:31,0:31:87.05:0,87,858	0/0:22,0:22:63.14:0,63,643	0/0:22,0:22:57.13:0,57,581	0/0:29,0:29:78.16:0,78,789	0/0:23,0:23:57.12:0,57,582	1/1:3,18:21:54.17:679,54,0	1/1:3,20:23:60.19:748,60,0	1/1:0,19:19:51.16:642,51,0	0/0:16,0:16:45.08:0,45,451	0/0:23,0:23:63.13:0,63,637	0/0:36,0:36:93.20:0,93,949	0/0:12,0:12:36.08:0,36,367
chr10	72210764	.	A	ATCTGTTC	10875.54	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-6.635;DP=747;FS=2.282;HRun=0;HaplotypeScore=165.1299;InbreedingCoeff=0.9606;MQ=77.48;MQ0=0;MQRankSum=-15.207;QD=80.56;ReadPosRankSum=-1.932;VQSLOD=4.9621;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:81.28:0,81,1985	0/0:18,0:18:54.18:0,54,1237	0/0:15,0:15:30.57:0,31,576	0/0:20,0:21:5.67:0,6,923	0/0:30,0:30:90.31:0,90,2143	0/0:31,0:31:81.26:0,81,1903	0/0:23,0:23:60.18:0,60,1389	0/0:38,0:38:78.23:0,78,1668	0/0:34,0:34:93.28:0,93,2220	0/0:39,0:39:99:0,108,2496	0/0:19,0:19:39.13:0,39,932	1/1:6,28:34:90.31:3377,90,0	1/1:7,21:30:63.22:2353,63,0	0/0:27,0:27:78.27:0,78,1866	0/0:31,0:30:75.24:0,75,1762	0/0:34,0:34:93.32:0,93,2162	0/0:13,0:13:36.12:0,36,870	0/0:12,0:12:36.12:0,36,864	0/0:19,0:19:45.15:0,45,1081	0/0:33,0:33:84.27:0,84,1983	0/0:35,0:35:99:0,99,2380	1/1:8,21:29:72.25:2544,72,0	1/1:10,19:32:71.81:2256,72,0	1/1:4,6:10:9.03:345,9,0	0/0:28,0:28:75.26:0,75,1769	0/0:31,0:31:84.29:0,84,2017	0/0:30,0:30:84.29:0,84,1974	0/0:18,0:18:48.15:0,48,1128
chr10	72211595	.	TAA	T	149.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.518;DP=303;FS=2.219;HRun=2;HaplotypeScore=42.6191;InbreedingCoeff=0.8308;MQ=72.40;MQ0=0;MQRankSum=-4.461;QD=21.31;ReadPosRankSum=0.608;VQSLOD=1.6430;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:51.17:0,51,1006	0/0:5,0:5:15.05:0,15,290	0/0:6,0:6:15.05:0,15,221	0/0:4,0:4:9.03:0,9,136	0/0:19,0:19:57.19:0,57,1064	0/0:10,0:10:30.06:0,30,496	0/0:8,0:8:24.08:0,24,480	0/0:20,0:19:60.19:0,60,1066	0/0:10,0:10:30.09:0,30,527	0/0:16,0:16:45.15:0,45,827	0/0:14,0:14:42.13:0,42,804	0/0:7,0:7:21.07:0,21,401	0/0:10,0:10:30.10:0,30,580	0/0:10,0:10:30.10:0,30,546	0/0:11,0:11:33.11:0,33,641	0/0:5,0:5:15.05:0,15,300	0/0:17,0:17:51.17:0,51,982	1/1:0,7:7:21.06:241,21,0	0/0:7,0:7:21.07:0,21,420	0/0:13,0:13:39.12:0,39,745	0/0:9,0:9:24.06:0,24,408	0/0:3,0:3:9.03:0,9,180	0/0:8,0:8:24.08:0,24,462	0/0:5,0:5:15.05:0,15,282	0/0:14,0:14:42.14:0,42,804	0/0:22,0:22:66.22:0,66,1251	0/0:12,0:12:36.12:0,36,679	0/0:12,0:12:36.12:0,36,683
chr10	72211598	.	TTAATTAA	T	405.86	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.330;DP=290;FS=2.153;HRun=0;HaplotypeScore=70.6819;InbreedingCoeff=0.8055;MQ=71.36;MQ0=0;MQRankSum=-5.309;QD=40.59;ReadPosRankSum=1.232;VQSLOD=3.1110;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:54.19:0,54,1993	0/0:5,0:5:15.05:0,15,586	0/0:5,0:5:12.01:0,12,250	0/0:4,0:4:8.96:0,9,137	0/0:16,0:16:48.15:0,48,1760	0/0:9,0:9:27.09:0,27,967	0/0:8,0:8:24.08:0,24,926	0/0:19,0:18:51.16:0,51,1752	0/0:9,0:9:27.09:0,27,864	0/0:15,0:15:39.13:0,39,1358	0/0:13,0:13:39.13:0,39,1464	0/0:6,0:6:18.06:0,18,689	0/0:11,0:11:27.09:0,27,1019	0/0:10,0:10:27.08:0,27,808	0/0:10,0:10:30.10:0,30,1159	0/0:5,0:5:15.05:0,15,594	0/0:16,0:16:48.16:0,48,1802	1/1:3,7:10:29.46:500,29,0	0/0:8,0:8:24.08:0,24,876	0/0:12,0:12:36.12:0,36,1406	0/0:6,0:6:18.04:0,18,617	0/0:3,0:3:9.03:0,9,357	0/0:8,0:8:24.08:0,24,854	0/0:4,0:4:12.04:0,12,465	0/0:13,0:13:39.11:0,39,1450	0/0:21,0:21:63.22:0,63,2176	0/0:12,0:12:33.11:0,33,1230	0/0:12,0:12:33.11:0,33,1146
chr10	72211964	.	A	ATGTGTGTGTTTTCG	663.37	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=6.077;DP=683;FS=2.058;HRun=0;HaplotypeScore=269.0067;InbreedingCoeff=0.4385;MQ=67.62;MQ0=12;MQRankSum=-4.229;QD=10.53;ReadPosRankSum=-0.887;VQSLOD=2.2460;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:36.01:0,36,511	0/0:6,0:6:9.03:0,9,227	0/0:45,0:25:32.87:0,33,533	0/0:51,0:25:27.01:0,27,371	0/0:25,0:25:60.21:0,60,1571	0/0:29,0:29:46.94:0,47,1433	0/0:27,0:27:57.16:0,57,1373	0/0:30,0:30:51.11:0,51,908	0/0:21,0:21:48.16:0,48,1493	0/1:25,0:25:24.05:24,0,472	0/0:11,0:11:14.61:0,15,308	0/0:25,0:25:30.37:0,30,521	0/0:17,0:17:23.71:0,24,316	0/0:18,0:18:48.14:0,48,1434	0/0:32,0:31:63.19:0,63,2071	0/0:36,0:36:78.25:0,78,2101	0/1:26,0:26:0.18:0,0,357	1/1:6,5:12:18:742,18,0	0/0:35,0:35:37.37:0,37,751	0/0:7,0:7:12.04:0,12,331	0/0:42,0:42:84.27:0,84,2316	0/0:16,0:16:16.81:0,17,332	0/0:9,0:9:9:0,9,106	0/0:40,0:40:75.48:0,75,1052	0/0:15,0:15:4.54:0,5,220	0/0:24,0:24:27.07:0,27,634	0/0:27,0:27:69.21:0,69,1853	0/0:9,0:9:20.98:0,21,394
chr10	72211977	.	C	CGTGT	4504.97	PASS	AB=1.000;AC=20;AF=0.400;AN=50;BaseQRankSum=-3.234;DP=714;FS=1.020;HRun=0;HaplotypeScore=133.0785;InbreedingCoeff=0.7372;MQ=60.04;MQ0=15;MQRankSum=0.277;QD=18.02;ReadPosRankSum=2.121;VQSLOD=4.4424;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,9:30:22.84:509,23,0	0/0:6,0:5:9.03:0,9,138	./.	./.	0/0:24,0:26:33.09:0,33,477	0/0:27,0:32:45.09:0,45,614	0/1:30,0:30:7.65:8,0,530	0/0:31,0:35:4.17:0,4,385	0/0:21,0:21:36.12:0,36,553	1/1:17,0:24:24:390,24,0	./.	1/1:15,6:24:44.31:761,44,0	1/1:7,8:17:20.81:436,21,0	0/0:23,0:26:48.12:0,48,714	0/0:29,0:33:72.24:0,72,1101	0/0:32,0:37:51.13:0,51,698	1/1:18,6:31:26.83:525,27,0	0/1:15,0:15:22.61:23,0,305	0/0:30,0:32:27.08:0,27,367	0/0:8,0:8:15.04:0,15,218	0/0:40,0:43:90.23:0,90,1255	1/1:8,7:16:4.89:141,5,0	1/1:3,2:5:6.02:143,6,0	1/1:21,17:40:74.38:1516,74,0	1/1:12,1:17:3.01:52,3,0	0/0:27,0:27:26.67:0,27,372	0/0:30,0:30:60.20:0,60,929	0/0:7,0:9:12.03:0,12,147
chr10	72212091	.	CTGT	C	333.28	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.290;DP=723;FS=3.169;HRun=0;HaplotypeScore=116.6336;InbreedingCoeff=0.9903;MQ=78.93;MQ0=0;MQRankSum=0.494;QD=18.52;ReadPosRankSum=-1.730;VQSLOD=2.8450;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,99,1139	0/0:10,0:10:30.09:0,30,601	0/0:38,0:35:55.78:0,56,937	0/0:33,0:30:45.58:0,46,896	0/0:17,0:17:51.09:0,51,764	0/0:25,0:25:72.05:0,72,1112	0/0:19,0:19:51.07:0,51,913	0/0:28,0:28:72.13:0,72,993	0/0:24,0:24:69.17:0,69,1268	0/0:32,0:32:93.19:0,93,1381	0/0:17,0:17:47.47:0,47,743	0/0:33,0:33:87.15:0,87,1128	0/0:25,0:25:54.57:0,55,712	0/0:18,0:18:51.08:0,51,750	0/0:36,0:36:99:0,102,2074	0/0:45,0:45:99:0,129,2615	0/0:32,0:32:87.14:0,87,1629	1/1:3,15:18:27.09:427,27,0	0/0:23,0:23:66.03:0,66,830	0/0:13,0:13:39.02:0,39,387	0/0:53,0:53:99:0,159,2375	0/0:15,0:15:42.08:0,42,508	0/0:18,0:18:42.06:0,42,517	0/0:35,0:35:99:0,99,1396	0/0:16,0:16:47.29:0,47,780	0/0:25,0:25:62.75:0,63,812	0/0:30,0:30:74.22:0,74,1419	0/0:6,0:6:18.03:0,18,310
chr10	72212098	.	T	TGTG	4452.05	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-10.038;DP=743;FS=2.194;HRun=0;HaplotypeScore=109.4098;InbreedingCoeff=0.9199;MQ=75.00;MQ0=1;MQRankSum=0.133;QD=26.19;ReadPosRankSum=1.162;VQSLOD=5.1267;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:22,18:40:39.13:779,39,0	0/0:11,0:11:27.07:0,27,361	0/0:39,0:33:29.94:0,30,325	0/0:34,0:29:29.68:0,30,331	0/0:17,0:17:24.08:0,24,337	0/0:27,0:27:42.09:0,42,522	0/0:17,0:17:36.12:0,36,505	0/0:26,0:26:30.05:0,30,384	0/0:25,0:25:57.16:0,57,766	0/0:35,0:35:48.12:0,48,602	0/0:17,0:17:24.08:0,24,336	1/1:16,20:36:51.18:1017,51,0	1/1:10,14:24:33.58:650,34,0	0/0:19,0:19:21.06:0,21,281	0/0:37,0:37:93.30:0,93,1289	0/0:45,0:45:99:0,123,1652	0/0:32,0:32:75.18:0,75,1010	0/0:18,0:18:8.63:0,9,198	0/0:23,0:23:20.99:0,21,250	0/0:12,0:12:3.01:0,3,42	0/0:57,0:57:84.17:0,84,1086	1/1:11,6:17:6.33:304,6,0	1/1:7,9:16:21.07:421,21,0	1/1:11,25:37:27.12:1281,27,0	0/0:18,0:18:15.12:0,15,409	0/0:22,0:22:27.08:0,27,351	0/0:33,0:34:66.12:0,66,820	0/0:7,0:7:12.04:0,12,169
chr10	72214963	.	GT	G	647.65	PASS	AB=0.863;AC=16;AF=0.286;AN=56;BaseQRankSum=3.327;DP=578;FS=4.810;HRun=15;HaplotypeScore=70.8379;InbreedingCoeff=0.2325;MQ=71.44;MQ0=4;MQRankSum=0.416;QD=2.67;ReadPosRankSum=2.275;VQSLOD=-0.3623;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:25:46.38:0,46,252	0/1:3,1:5:11.75:12,0,31	0/0:30,0:13:0.92:0,1,90	0/1:24,0:16:12.77:13,0,29	0/0:28,0:31:51.29:0,51,438	0/0:17,1:23:26.59:0,27,361	0/0:25,2:27:16.09:0,16,368	0/1:27,5:32:2.21:2,0,375	0/0:13,1:17:13.72:0,14,227	1/1:5,5:12:15.78:87,16,0	1/1:7,19:32:42.18:240,42,0	0/0:10,0:12:15.19:0,15,136	0/0:15,1:17:18.26:0,18,178	0/0:11,0:13:22.82:0,23,205	0/0:6,0:16:17.36:0,17,109	0/1:17,1:21:2.41:2,0,237	1/1:4,13:18:11.10:187,11,0	0/0:15,1:19:11.82:0,12,209	0/1:20,3:26:60.37:60,0,176	0/0:34,2:38:32.16:0,32,473	0/0:13,1:16:10.24:0,10,179	0/1:10,4:15:27.36:27,0,62	0/1:11,3:17:32.68:33,0,152	0/0:9,0:9:8.92:0,9,64	1/1:5,14:19:0.23:127,0,0	0/1:18,1:21:20.26:20,0,178	0/0:30,3:33:36.32:0,36,500	0/0:8,0:9:20.10:0,20,193
chr10	72215397	.	C	CTTTGT	893.24	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.001;DP=734;FS=5.523;HRun=0;HaplotypeScore=132.6981;InbreedingCoeff=0.9142;MQ=73.22;MQ0=0;MQRankSum=-4.167;QD=28.81;ReadPosRankSum=0.772;VQSLOD=3.3808;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,102,1811	0/0:7,0:7:9.03:0,9,171	0/0:29,0:28:37.60:0,38,529	0/0:25,0:23:22.84:0,23,374	0/0:35,0:35:60.10:0,60,1006	0/0:25,0:24:62.92:0,63,1083	0/0:23,0:23:48.11:0,48,787	0/0:27,0:27:36.07:0,36,525	0/0:22,0:22:60.18:0,60,1065	0/0:40,0:40:99:0,99,1760	0/0:25,0:25:63.19:0,63,1119	0/0:21,0:21:51.17:0,51,942	0/0:22,0:22:48.16:0,48,913	0/0:24,0:24:51.04:0,51,939	0/0:35,0:35:93.28:0,93,1660	0/0:19,0:19:42.10:0,42,685	0/0:24,0:24:54.19:0,54,1004	1/1:7,20:31:38.99:988,39,0	0/0:13,0:13:24.08:0,24,441	0/0:40,0:40:87.26:0,87,1553	0/0:27,0:27:60.17:0,60,1032	0/0:26,0:26:57.13:0,57,938	0/0:19,0:18:42.12:0,42,735	0/0:26,0:25:54.14:0,54,930	0/0:28,0:27:69.22:0,69,1281	0/0:31,0:31:69.22:0,69,1224	0/0:41,0:41:99:0,99,1755	0/0:9,0:9:12.04:0,12,228
chr10	72215979	.	CGTGTGT	C	2283.61	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.860;DP=816;FS=5.590;HRun=0;HaplotypeScore=193.0270;InbreedingCoeff=0.9044;MQ=57.67;MQ0=10;MQRankSum=-10.434;QD=14.55;ReadPosRankSum=-0.234;VQSLOD=2.7934;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:42:4.22:30,4,0	0/0:6,0:8:18.06:0,18,458	0/0:26,0:11:12.04:0,12,206	0/0:28,0:16:15.87:0,16,432	0/0:25,0:27:66.23:0,66,1947	0/0:30,0:31:68.23:0,68,1905	0/0:26,0:26:63.18:0,63,1819	0/0:44,0:45:17.72:0,18,1624	0/0:20,0:21:52.95:0,53,1448	0/0:25,0:26:60.21:0,60,1827	0/0:22,0:26:66.23:0,66,1987	1/1:5,22:28:27.09:540,27,0	1/1:7,25:32:42.61:820,43,0	0/0:19,0:23:47.49:0,47,1527	0/0:40,0:43:93.30:0,93,2686	0/0:47,0:47:99:0,117,3413	0/0:29,0:32:62.56:0,63,1920	0/0:12,0:17:16.25:0,16,327	0/0:23,0:22:48.15:0,48,1204	0/0:38,0:38:81.28:0,81,2462	0/0:50,0:49:99:0,99,3124	1/1:4,20:25:29.97:591,30,0	1/1:8,22:30:24.17:470,24,0	0/0:13,10:23:2.14:0,2,42	0/0:28,0:31:66.22:0,66,1901	0/0:25,0:27:57.19:0,57,1607	0/0:18,0:18:45.11:0,45,1296	0/0:20,0:21:48.14:0,48,1404
chr10	72217433	.	A	AGAAG	1530.02	PASS	AC=20;AF=0.385;AN=52;BaseQRankSum=0.811;DP=518;FS=0.000;HRun=0;HaplotypeScore=83.0840;InbreedingCoeff=0.8214;MQ=54.17;MQ0=12;MQRankSum=-1.864;QD=9.56;ReadPosRankSum=0.951;VQSLOD=2.5156;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,1:24:6:76,6,0	0/0:8,0:8:15.05:0,15,235	./.	./.	0/0:15,0:14:27.08:0,27,401	0/0:31,0:31:57.09:0,57,811	0/0:24,0:24:24.01:0,24,304	0/0:32,0:20:21.01:0,21,234	0/0:17,0:17:29.75:0,30,389	1/1:10,9:19:30.07:625,30,0	1/1:5,4:9:8.95:159,9,0	1/1:9,0:15:23.30:179,23,0	1/1:4,0:19:9.03:156,9,0	0/0:24,0:24:45.15:0,45,704	0/0:22,0:20:36.09:0,36,500	0/0:20,0:20:30.09:0,30,446	1/1:5,7:12:6.02:142,6,0	0/0:7,0:12:6:0,6,51	0/0:8,0:8:3.01:0,3,47	0/0:19,0:19:42.08:0,42,560	0/0:31,0:30:57.09:0,57,859	1/1:10,0:17:8.95:121,9,0	1/1:5,0:10:3.01:56,3,0	1/1:10,0:20:5.05:64,5,0	1/1:5,7:13:5.01:140,5,0	0/0:24,0:25:45.14:0,45,665	0/0:11,0:12:18.04:0,18,240	0/0:10,0:9:24.05:0,24,350
chr10	72220300	.	GACCTCCACACATGCTGAA	G	598.87	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.816;DP=483;FS=0.000;HRun=0;HaplotypeScore=221.8925;InbreedingCoeff=0.9823;MQ=79.00;MQ0=0;MQRankSum=-4.186;QD=46.07;ReadPosRankSum=1.093;VQSLOD=2.7735;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:13:18.02:689,18,0	0/0:10,0:10:30.10:0,30,2629	0/0:15,0:15:45.15:0,45,2908	0/0:16,0:16:45.02:0,45,3028	0/0:30,0:30:90.31:0,90,6716	0/0:16,0:15:48.16:0,48,3129	0/0:21,0:21:63.22:0,63,4886	0/0:38,0:38:99:0,114,7896	0/0:16,0:16:48.16:0,48,4082	0/0:16,0:16:48.16:0,48,3674	0/0:13,0:13:39.13:0,39,3208	0/0:19,0:18:54.19:0,54,4408	0/0:14,0:14:39.13:0,39,2930	0/0:10,0:10:30.10:0,30,2294	0/0:24,0:24:72.25:0,72,5722	0/0:16,0:16:48.16:0,48,3899	0/0:24,0:24:72.25:0,72,5866	0/0:16,0:16:48.16:0,48,3913	0/0:18,0:18:54.19:0,54,4129	0/0:25,0:25:75.24:0,75,5313	0/0:20,0:20:60.21:0,60,4278	0/0:6,0:6:18.06:0,18,1378	0/0:17,0:17:51.18:0,51,3775	0/0:12,0:12:36.12:0,36,2806	0/0:16,0:16:48.16:0,48,3726	0/0:12,0:12:36.12:0,36,2984	0/0:19,0:19:57.20:0,57,4946	0/0:11,0:11:33.11:0,33,2360
chr10	72220477	.	C	CAG	601.91	PASS	AB=0.841;AC=20;AF=0.385;AN=52;BaseQRankSum=0.714;DP=437;FS=0.000;HRun=0;HaplotypeScore=59.5415;InbreedingCoeff=0.2832;MQ=63.67;MQ0=7;MQRankSum=1.189;QD=2.88;ReadPosRankSum=-0.868;VQSLOD=1.3833;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:23:5.27:0,5,27	0/0:5,0:6:5.85:0,6,46	./.	0/1:23,0:10:0:0,0,0	0/0:19,0:18:9.47:0,9,88	0/0:20,0:20:3:0,3,32	0/0:15,0:16:14.86:0,15,142	0/1:18,0:18:0:0,0,0	0/1:9,8:17:19.94:120,0,20	1/1:17,0:17:15.04:181,15,0	1/1:12,0:11:9.01:92,9,0	1/1:4,7:10:3.01:44,3,0	0/0:12,0:12:2.83:0,3,31	0/0:17,0:17:15.01:0,15,148	0/0:14,0:14:12.03:0,12,127	0/1:13,1:15:29.13:29,0,95	0/1:6,1:12:22.05:61,0,22	0/1:13,5:19:47.86:117,0,48	1/1:17,0:17:0.08:1,0,0	0/0:21,0:21:3.01:0,3,32	./.	0/0:9,0:9:3.01:0,3,32	1/1:17,0:17:3:28,3,0	1/1:14,0:13:2.99:25,3,0	1/1:17,0:16:5.99:50,6,0	0/0:10,0:10:3:0,3,32	0/0:19,0:21:11.86:0,12,110	0/0:11,0:12:8.85:0,9,77
chr10	72222083	.	G	GTAAGC	9557.03	PASS	AB=0.970;AC=19;AF=0.339;AN=56;BaseQRankSum=-6.924;DP=453;FS=4.358;HRun=0;HaplotypeScore=84.4013;InbreedingCoeff=0.9516;MQ=90.85;MQ0=1;MQRankSum=-9.379;QD=59.73;ReadPosRankSum=3.331;VQSLOD=5.0509;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.21:0,66,1430	0/0:5,0:5:15.05:0,15,334	0/0:25,0:25:49.51:0,50,1137	0/0:16,0:16:44.64:0,45,650	0/0:19,0:19:51.18:0,51,1136	0/0:10,0:10:24.08:0,24,533	0/0:27,0:27:69.23:0,69,1488	0/0:27,0:27:78.24:0,78,1528	0/0:15,0:15:42.13:0,42,895	1/1:1,10:14:36.09:999,36,0	1/1:1,7:9:21.03:600,21,0	1/1:5,13:18:51.17:1565,51,0	1/1:2,11:13:36.12:1141,36,0	0/0:10,0:10:30.09:0,30,629	0/0:13,0:13:39.08:0,39,781	0/0:19,0:19:54.14:0,54,1157	1/1:6,8:13:36.06:1038,36,0	0/0:12,0:12:27.09:0,27,602	0/0:13,0:13:36.09:0,36,676	0/0:17,0:17:48.16:0,48,1051	0/0:13,0:13:39.13:0,39,869	1/1:2,11:14:39.13:1207,39,0	1/1:1,7:8:15.01:405,15,0	1/1:7,13:21:42.14:1288,42,0	1/1:3,13:16:42.14:1313,42,0	0/1:31,1:31:0.33:0,0,1859	0/0:21,0:21:63.17:0,63,1266	0/0:8,0:7:24.06:0,24,491
chr10	72222166	.	TC	T	1316.68	PASS	AB=0.893;AC=9;AF=0.161;AN=56;BaseQRankSum=2.150;DP=449;FS=1.662;HRun=9;HaplotypeScore=64.1923;InbreedingCoeff=0.7720;MQ=70.93;MQ0=4;MQRankSum=-0.950;QD=13.72;ReadPosRankSum=3.379;VQSLOD=3.6208;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:39.95:0,40,166	0/0:3,0:3:9.03:0,9,104	0/0:23,0:15:21.84:0,22,288	0/0:19,0:15:24.70:0,25,223	0/0:19,0:19:41.82:0,42,448	0/0:14,0:14:30.09:0,30,345	0/0:22,1:23:35.81:0,36,654	0/0:16,0:16:18.03:0,18,190	0/0:13,0:13:39.05:0,39,403	1/1:2,16:17:45:408,45,0	1/1:1,9:9:23.56:194,24,0	0/0:13,0:16:6.50:0,7,113	0/0:9,0:13:21.59:0,22,129	0/0:8,0:8:15.04:0,15,165	0/0:12,0:12:24.05:0,24,259	0/0:12,1:13:11.65:0,12,385	1/1:5,19:23:52.56:470,53,0	0/0:20,0:20:32.75:0,33,147	0/0:11,0:11:15.03:0,15,163	0/0:7,0:7:12.51:0,13,140	0/1:22,3:25:19.26:19,0,505	0/0:4,0:8:14.39:0,14,85	0/0:8,0:15:6.52:0,7,81	0/0:18,0:24:26.61:0,27,197	1/1:2,17:18:25.26:389,25,0	0/0:15,0:15:35.69:0,36,394	0/0:18,1:19:26.73:0,27,491	0/0:12,1:13:8.64:0,9,353
chr10	72222167	.	C	CT	1003.12	PASS	AB=0.992;AC=9;AF=0.161;AN=56;BaseQRankSum=0.079;DP=459;FS=16.766;HRun=1;HaplotypeScore=66.2847;InbreedingCoeff=0.3898;MQ=70.58;MQ0=4;MQRankSum=-0.484;QD=7.84;ReadPosRankSum=1.385;VQSLOD=-0.5952;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:48.16:655,48,0	0/0:3,0:3:9.03:0,9,125	0/0:25,0:16:31.63:0,32,370	0/0:17,0:14:18.08:0,18,293	0/0:19,0:19:51.59:0,52,626	0/0:15,0:15:42.09:0,42,519	0/0:24,0:24:63.11:0,63,837	0/0:16,0:16:33.06:0,33,351	0/0:13,0:13:38.97:0,39,449	0/0:19,0:18:49.91:0,50,304	0/0:10,0:9:26.34:0,26,162	0/1:16,0:16:37.63:38,0,74	0/1:13,0:13:12.49:12,0,72	0/0:8,0:8:23.59:0,24,244	0/0:12,0:12:35.96:0,36,409	0/0:13,0:13:39.04:0,39,517	0/0:25,0:24:58.52:0,59,349	1/1:5,16:20:22.17:406,22,0	0/0:11,0:11:17.98:0,18,286	0/0:7,0:7:10.57:0,11,209	0/0:26,0:26:74.84:0,75,816	0/1:8,0:8:1.17:1,0,57	0/1:17,0:16:1.14:1,0,164	0/1:24,0:25:30.34:30,0,106	0/0:19,0:18:52.72:0,53,328	0/0:15,0:15:42.10:0,42,520	0/0:19,0:19:56.87:0,57,625	0/0:13,0:13:39.03:0,39,499
chr10	72222637	.	CAG	C	8985.88	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.080;DP=569;FS=1.513;HRun=0;HaplotypeScore=75.9553;InbreedingCoeff=0.9978;MQ=82.51;MQ0=1;MQRankSum=-0.922;QD=35.10;ReadPosRankSum=3.917;VQSLOD=6.8346;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:75.25:999,75,0	0/0:7,0:7:21.07:0,21,364	0/0:14,0:14:36.11:0,36,588	0/0:18,0:19:44.38:0,44,681	0/0:13,0:13:33.11:0,33,566	0/0:16,0:16:42.14:0,42,727	0/0:29,0:29:75.26:0,75,1299	0/0:15,0:15:39.13:0,39,676	0/0:16,0:16:45.15:0,45,774	1/1:1,14:15:42.14:559,42,0	1/1:1,8:9:24.08:320,24,0	1/1:1,19:19:57.19:756,57,0	1/1:2,19:21:51.17:679,51,0	0/0:31,0:31:87.30:0,87,1489	0/0:23,0:23:69.24:0,69,1188	0/0:16,0:16:39.12:0,39,649	1/1:2,28:30:81.27:1079,81,0	1/1:2,38:40:99:1438,108,0	0/0:15,0:15:45.13:0,45,705	0/0:12,0:12:36.12:0,36,624	0/0:35,0:35:93.26:0,93,1497	1/1:1,14:15:39.13:519,39,0	1/1:2,27:29:75.19:999,75,0	1/1:2,31:33:81.27:1079,81,0	1/1:1,15:16:42.14:559,42,0	0/0:30,0:30:72.25:0,72,1240	0/0:14,0:14:42.14:0,42,719	0/0:8,0:8:18.06:0,18,312
chr10	72223651	.	TAAAAGGGTG	T	10085.94	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.316;DP=624;FS=3.386;HRun=0;HaplotypeScore=174.5518;InbreedingCoeff=0.9967;MQ=84.98;MQ0=0;MQRankSum=-15.472;QD=55.72;ReadPosRankSum=2.287;VQSLOD=4.3465;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.20:0,57,2682	0/0:11,0:11:24.08:0,24,1130	0/0:26,0:26:57.20:0,57,2345	0/0:21,0:21:45.13:0,45,1691	0/0:21,0:21:51.18:0,51,2224	0/0:32,0:32:75.24:0,75,3260	0/0:23,0:23:66.23:0,66,3018	0/0:40,0:40:87.30:0,87,3936	0/0:23,0:23:63.20:0,63,2678	1/1:8,20:28:66.21:1819,66,0	1/1:1,18:19:45.11:1239,45,0	1/1:9,13:22:30.10:871,30,0	1/1:7,15:22:45.15:1307,45,0	0/0:20,0:20:54.19:0,54,2498	0/0:31,0:31:81.28:0,81,3772	0/0:24,0:24:63.22:0,63,2925	1/1:4,13:17:24.08:697,24,0	0/0:18,0:18:42.11:0,42,1668	0/0:15,0:15:33.11:0,33,1532	0/0:27,0:27:78.27:0,78,3583	0/0:25,0:25:60.21:0,60,2769	1/1:1,20:21:54.19:1554,54,0	1/1:1,17:18:41.77:1170,42,0	1/1:7,13:20:15.05:385,15,0	1/1:1,13:14:36.12:1045,36,0	0/0:19,0:19:51.18:0,51,2400	0/0:31,0:30:84.27:0,84,3759	0/0:16,0:16:45.15:0,45,2110
chr10	72224844	.	TTATGTATG	T	3857.65	PASS	AB=0.816;AC=18;AF=0.333;AN=54;BaseQRankSum=9.631;DP=675;FS=2.419;HRun=0;HaplotypeScore=180.6934;InbreedingCoeff=0.8623;MQ=69.77;MQ0=4;MQRankSum=-10.544;QD=16.28;ReadPosRankSum=-2.551;VQSLOD=2.2360;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:35:26.94:0,27,220	0/0:10,0:10:21.07:0,21,844	0/1:20,0:19:0:0,0,0	./.	0/0:25,0:25:57.20:0,57,2136	0/0:14,0:14:33.11:0,33,1260	0/0:28,0:28:33.11:0,33,1273	0/0:19,0:16:15.05:0,15,361	0/0:31,0:31:60.21:0,60,2327	1/1:14,0:26:31.20:489,31,0	1/1:7,0:22:20.98:205,21,0	1/1:15,19:34:48.16:1182,48,0	1/1:10,15:25:20.76:512,21,0	0/0:23,0:23:45.15:0,45,1636	0/0:25,0:39:51.17:0,51,1464	0/0:16,0:40:54.10:0,54,1806	0/1:13,0:30:18.48:50,0,18	0/0:11,0:18:23.96:0,24,220	0/0:11,0:9:12.04:0,12,454	0/0:28,0:28:51.16:0,51,1835	0/0:30,0:30:45.15:0,45,1691	1/1:7,8:15:18.06:370,18,0	1/1:6,12:18:24.08:580,24,0	1/1:15,7:22:6.49:90,6,0	1/1:11,0:24:27.04:379,27,0	0/0:25,0:25:39.13:0,39,1600	0/0:30,0:30:66.23:0,66,2502	0/0:15,0:15:30.10:0,30,1166
chr10	72225915	.	G	GGT	3041.91	PASS	AB=0.834;AC=31;AF=0.574;AN=54;BaseQRankSum=-0.448;DP=571;FS=4.078;HRun=0;HaplotypeScore=109.1127;InbreedingCoeff=-0.4387;MQ=57.35;MQ0=18;MQRankSum=1.282;QD=6.06;ReadPosRankSum=1.747;VQSLOD=2.9323;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:21:11.36:0,11,56	0/1:6,3:9:23.29:70,0,23	1/1:23,0:9:0.47:1,0,0	0/1:34,0:14:0:0,0,0	0/1:21,3:26:41.37:294,0,41	0/1:6,4:10:10.68:80,0,11	0/1:23,3:29:62.39:216,0,62	0/0:32,0:31:2.99:0,3,27	0/1:14,3:17:25.31:157,0,25	1/1:20,0:20:12.21:91,12,0	0/1:18,0:18:64.28:64,0,103	./.	1/1:9,0:10:23.47:172,23,0	0/1:8,6:14:59.03:74,0,59	0/1:7,4:11:55.79:144,0,56	0/1:4,7:12:35.95:254,0,36	0/1:23,0:24:59.57:137,0,60	0/1:20,0:21:11.36:138,0,11	1/1:22,1:23:0.88:78,1,0	0/1:12,5:19:23.57:60,0,24	0/1:18,10:26:71.43:71,0,74	0/1:16,0:17:14.72:79,0,15	1/1:21,0:20:26.57:214,27,0	1/1:29,0:28:31.68:237,32,0	0/1:20,0:20:10.39:70,0,10	0/1:25,1:25:77.09:114,0,77	0/1:19,4:24:57.13:114,0,57	0/1:5,6:12:6.01:262,0,6
chr10	72225926	.	G	GTGTA	593.41	PASS	AB=0.932;AC=6;AF=0.107;AN=56;BaseQRankSum=4.412;DP=597;FS=3.991;HRun=0;HaplotypeScore=131.5501;InbreedingCoeff=-0.1166;MQ=54.60;MQ0=23;MQRankSum=-0.533;QD=4.90;ReadPosRankSum=2.805;VQSLOD=2.3161;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:48.44:0,48,413	0/0:10,0:10:4.53:0,5,162	0/0:21,0:7:8.98:0,9,84	0/0:33,0:10:14.90:0,15,120	0/0:29,0:29:29.06:0,29,392	0/0:13,0:13:18.68:0,19,169	0/0:34,0:34:11.99:0,12,572	0/0:33,0:31:83.57:0,84,681	0/0:18,0:18:33.54:0,34,289	0/0:18,0:18:46.12:0,46,396	0/0:19,0:18:39:0,39,461	0/0:18,0:18:11.98:0,12,98	0/1:11,0:11:71.76:72,0,93	0/0:17,0:16:21.83:0,22,251	0/0:15,0:14:24.85:0,25,275	0/0:13,0:13:17.46:0,17,144	0/0:25,0:25:62.35:0,62,673	0/1:7,14:22:13.05:378,0,13	0/0:22,0:22:43.81:0,44,451	0/1:19,0:19:8.96:9,0,265	0/0:38,0:34:44.87:0,45,439	0/1:21,0:21:58.37:58,0,159	0/1:19,0:18:67.45:95,0,67	0/1:28,0:26:99:103,0,201	0/0:19,0:19:40.59:0,41,410	0/0:23,0:22:30.97:0,31,504	0/0:20,0:19:25.37:0,25,283	0/0:11,0:10:11.64:0,12,87
chr10	72225954	.	G	GTGCA	3628.03	PASS	AB=0.789;AC=16;AF=0.296;AN=54;BaseQRankSum=1.425;DP=588;FS=0.000;HRun=0;HaplotypeScore=119.9495;InbreedingCoeff=0.6713;MQ=55.36;MQ0=14;MQRankSum=1.552;QD=16.57;ReadPosRankSum=4.901;VQSLOD=2.8692;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:59.84:0,60,816	0/0:9,0:9:17.75:0,18,248	0/0:11,0:7:21.07:0,21,328	0/0:20,0:11:18.65:0,19,375	0/0:31,0:31:67.84:0,68,776	0/0:16,0:16:30.73:0,31,428	0/0:30,0:30:41.33:0,41,745	0/0:23,0:21:51.04:0,51,667	0/0:18,0:18:35.14:0,35,446	1/1:0,0:17:44.97:602,45,0	1/1:16,0:21:5.70:359,6,0	./.	1/1:1,10:17:17.66:405,18,0	0/0:17,0:16:24.70:0,25,347	0/0:20,0:19:47.49:0,47,659	0/1:17,0:17:7.49:7,0,368	1/1:15,0:26:23.18:529,23,0	0/1:26,0:25:6.14:6,0,307	0/0:18,0:18:35.37:0,35,465	0/0:19,0:19:11.48:0,11,369	0/0:36,0:32:55.16:0,55,735	1/1:2,13:19:16.12:356,16,0	1/1:4,10:21:26.65:574,27,0	0/1:11,19:32:36.79:618,0,37	0/1:4,0:18:2.84:171,0,3	0/0:23,0:23:60.07:0,60,874	0/0:23,0:22:46.62:0,47,622	0/0:13,0:13:29.41:0,29,267
chr10	72227182	.	G	GA	1170.31	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=-5.128;DP=627;FS=2.698;HRun=10;HaplotypeScore=63.9996;InbreedingCoeff=0.5450;MQ=62.11;MQ0=13;MQRankSum=0.264;QD=12.58;ReadPosRankSum=0.504;VQSLOD=3.4291;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,38:49:99:1235,117,0	0/0:5,0:5:14.98:0,15,123	0/1:20,0:6:14.12:41,0,14	0/1:23,0:11:0.72:1,0,105	0/0:25,1:26:33.93:0,34,484	0/0:17,0:18:43.97:0,44,351	0/0:25,0:25:59.19:0,59,491	0/0:26,1:26:35.94:0,36,487	0/0:23,0:23:59.83:0,60,484	0/0:16,0:16:38.95:0,39,320	0/0:14,0:14:32.96:0,33,271	0/0:18,0:19:46.95:0,47,375	0/0:22,0:22:56.93:0,57,467	0/0:16,0:16:41.91:0,42,339	0/0:24,0:25:62.74:0,63,499	0/0:17,0:17:41.95:0,42,345	0/0:35,0:35:83.87:0,84,690	0/0:31,0:31:77.82:0,78,632	0/0:28,0:28:66.57:0,67,516	0/0:19,0:20:52.98:0,53,424	0/0:12,0:12:29.97:0,30,246	0/0:19,0:19:47.93:0,48,394	0/0:17,0:17:41.87:0,42,337	0/0:31,0:31:86.88:0,87,714	0/0:17,0:17:46.98:0,47,375	0/0:27,0:28:55.86:0,56,444	0/0:26,0:26:68.90:0,69,564	0/0:14,0:14:35.92:0,36,290
chr10	72227568	.	T	TG	608.19	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.134;DP=639;FS=9.078;HRun=0;HaplotypeScore=62.9738;InbreedingCoeff=0.9925;MQ=86.52;MQ0=0;MQRankSum=-0.358;QD=38.01;ReadPosRankSum=1.084;VQSLOD=3.4217;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:45.15:703,45,0	0/0:10,0:10:30.08:0,30,389	0/0:21,0:22:18.62:0,19,790	0/0:21,0:21:63.04:0,63,808	0/0:23,0:23:69.22:0,69,945	0/0:16,0:15:45.12:0,45,595	0/0:18,0:18:51.17:0,51,713	0/0:39,0:38:99:0,111,1520	0/0:31,0:31:93.26:0,93,1262	0/0:22,0:22:63.21:0,63,867	0/0:18,0:18:54.18:0,54,752	0/0:32,0:32:96.05:0,96,1295	0/0:20,0:20:57.19:0,57,795	0/0:26,0:26:78.26:0,78,1091	0/0:38,0:38:99:0,114,1549	0/0:30,0:30:87.27:0,87,1184	0/0:19,0:19:57.16:0,57,761	0/0:22,0:22:63.18:0,63,859	0/0:19,0:19:51.17:0,51,713	0/0:20,0:20:60.19:0,60,821	0/0:26,0:26:75.25:0,75,1048	0/0:19,0:19:57.18:0,57,781	0/0:25,0:25:75.25:0,75,1048	0/0:19,0:19:57.18:0,57,780	0/0:24,0:24:72.23:0,72,992	0/0:26,0:26:72.23:0,72,990	0/0:23,0:22:69.23:0,69,964	0/0:15,0:15:45.15:0,45,625
chr10	72228243	.	T	TA	1228.62	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.312;DP=555;FS=0.000;HRun=8;HaplotypeScore=48.4235;InbreedingCoeff=0.9903;MQ=69.92;MQ0=0;MQRankSum=-0.027;QD=25.07;ReadPosRankSum=1.181;VQSLOD=4.0905;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:63.19:727,63,0	0/0:11,0:11:27.01:0,27,247	0/0:15,0:15:42.02:0,42,383	0/0:10,0:9:17.03:0,17,141	0/0:31,0:31:77.98:0,78,698	0/0:32,0:32:84.02:0,84,764	0/0:9,0:9:21.01:0,21,192	0/0:25,0:25:66.03:0,66,601	0/0:23,0:23:63.03:0,63,577	0/0:16,0:16:42.02:0,42,384	0/0:18,0:18:48.02:0,48,439	0/0:20,0:20:57.03:0,57,521	0/0:19,0:19:57.03:0,57,522	0/0:17,0:17:51.03:0,51,467	0/0:22,0:22:60.03:0,60,549	0/0:22,0:22:48:0,48,435	0/0:32,0:32:84:0,84,757	1/1:3,18:21:54.16:623,54,0	0/0:8,0:8:23.99:0,24,214	0/0:28,0:28:77.98:0,78,700	0/0:12,0:12:36.02:0,36,329	0/0:25,0:25:69.02:0,69,627	0/0:22,0:22:54.03:0,54,494	0/0:12,0:12:33:0,33,297	0/0:28,0:28:81.04:0,81,741	0/0:23,0:23:63.02:0,63,572	0/0:16,0:16:48.03:0,48,439	0/0:10,0:10:27.01:0,27,247
chr10	72230228	.	TGTGTGTG	T	906.63	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=7.230;DP=584;FS=27.088;HRun=0;HaplotypeScore=106.6692;InbreedingCoeff=0.5633;MQ=43.06;MQ0=101;MQRankSum=-4.688;QD=5.27;ReadPosRankSum=0.055;VQSLOD=0.1370;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:29:49.47:0,49,620	0/0:5,0:4:12.04:0,12,323	0/0:9,0:2:6.01:0,6,66	0/0:24,0:4:4.37:0,4,40	0/0:13,0:11:24.08:0,24,441	0/0:16,0:15:18.01:0,18,764	0/0:31,0:29:53.22:0,53,808	0/0:25,0:16:45.14:0,45,567	0/0:16,0:13:30.96:0,31,539	0/0:13,0:11:22.03:0,22,333	0/0:7,0:6:6.02:0,6,75	1/1:7,14:15:6.02:167,6,0	1/1:25,0:10:17.52:360,18,0	0/0:14,0:14:20.98:0,21,544	0/0:26,0:25:60.20:0,60,1273	0/0:27,0:25:60.20:0,60,1060	0/1:25,0:20:24.09:24,0,285	0/1:21,0:12:41.26:41,0,168	0/1:10,0:6:5.34:5,0,210	0/0:11,0:9:21.07:0,21,308	0/0:51,0:38:75.25:0,75,1119	1/1:7,13:14:5.93:161,6,0	1/1:8,11:14:6.02:145,6,0	1/1:28,0:14:14.74:167,15,0	0/0:15,0:12:6.48:0,6,210	0/0:23,0:20:55.72:0,56,802	0/0:23,0:19:47.98:0,48,708	0/0:25,0:22:44.51:0,45,820
chr10	72230547	.	C	CT	1745.30	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=3.555;DP=499;FS=11.156;HRun=8;HaplotypeScore=60.8492;InbreedingCoeff=0.8298;MQ=60.67;MQ0=2;MQRankSum=1.381;QD=18.37;ReadPosRankSum=3.026;VQSLOD=2.6261;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:69.11:0,69,666	0/0:2,0:2:6.01:0,6,58	0/1:11,0:8:15.79:16,0,60	0/0:7,0:5:5.60:0,6,29	0/0:16,0:16:42.05:0,42,399	0/0:16,0:16:45.04:0,45,422	0/0:9,0:9:24.03:0,24,230	0/0:28,0:27:50.90:0,51,492	0/0:13,0:13:30.02:0,30,283	0/0:24,0:23:66.10:0,66,633	0/0:12,0:12:33.05:0,33,319	1/1:2,14:16:39.59:471,40,0	1/1:2,13:15:27.08:326,27,0	0/0:17,0:17:45.07:0,45,434	0/0:19,0:19:48.04:0,48,452	0/0:22,0:22:66.08:0,66,626	0/0:34,0:34:86.97:0,87,839	0/0:27,0:27:72.09:0,72,688	0/0:15,0:14:20.92:0,21,180	0/0:17,0:17:48.07:0,48,461	0/0:10,0:10:30.05:0,30,290	1/1:4,8:11:15.01:160,15,0	1/1:2,10:12:24.07:282,24,0	1/1:5,23:28:40.12:666,40,0	0/0:22,0:22:54.06:0,54,513	0/0:27,0:27:66.10:0,66,637	0/0:32,0:32:81.09:0,81,766	0/0:6,0:6:9.01:0,9,87
chr10	72232246	.	TG	T	3847.08	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.483;DP=656;FS=1.282;HRun=1;HaplotypeScore=72.3803;InbreedingCoeff=0.9981;MQ=83.75;MQ0=0;MQRankSum=-2.622;QD=35.62;ReadPosRankSum=2.696;VQSLOD=4.0505;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.24:0,78,1221	0/0:14,0:14:42.13:0,42,648	0/0:21,0:21:63.20:0,63,956	0/0:17,0:17:42.92:0,43,721	0/0:33,0:33:99:0,99,1547	0/0:26,0:26:78.24:0,78,1221	0/0:17,0:17:51.16:0,51,789	0/0:30,0:30:87.30:0,87,1389	0/0:23,0:23:69.22:0,69,1072	0/0:36,0:36:99:0,108,1696	0/0:26,0:26:78.21:0,78,1190	1/1:0,17:17:48.16:623,48,0	1/1:0,23:23:63.20:820,63,0	0/0:23,0:23:69.24:0,69,1101	0/0:22,0:22:66.21:0,66,1029	0/0:22,0:22:66.23:0,66,1055	0/0:29,0:29:87.27:0,87,1358	0/0:30,0:30:90.31:0,90,1429	0/0:25,0:25:75.15:0,75,1166	0/0:28,0:28:84.22:0,84,1247	0/0:23,0:23:69.24:0,69,1103	1/1:0,17:17:45.14:579,45,0	1/1:0,25:25:69.22:891,69,0	1/1:0,26:26:72.23:934,72,0	0/0:17,0:17:51.17:0,51,813	0/0:26,0:26:78.25:0,78,1202	0/0:28,0:28:84.29:0,84,1340	0/0:6,0:6:18.06:0,18,287
chr10	72232900	.	G	GTTT	2030.91	PASS	AB=0.605;AC=19;AF=0.339;AN=56;BaseQRankSum=2.497;DP=495;FS=11.000;HRun=13;HaplotypeScore=67.4175;InbreedingCoeff=0.8228;MQ=57.80;MQ0=8;MQRankSum=-1.885;QD=9.76;ReadPosRankSum=-0.637;VQSLOD=-0.6951;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,26:41:34.18:736,34,0	0/0:7,0:7:8.90:0,9,97	0/0:13,0:10:14.78:0,15,127	0/0:6,0:4:2.44:0,2,24	0/0:17,0:20:12.50:0,12,254	0/0:9,0:11:14.75:0,15,173	0/0:11,0:10:20.97:0,21,224	0/0:18,0:18:30.81:0,31,273	0/0:14,0:14:32.69:0,33,334	1/1:4,1:17:33.15:289,33,0	1/1:7,1:22:16.39:179,16,0	1/1:8,1:21:9.03:128,9,0	1/1:5,2:17:12.02:153,12,0	0/0:18,0:18:31.81:0,32,282	0/0:23,0:22:13.72:0,14,288	0/0:15,0:17:47.94:0,48,478	0/1:9,2:25:7.10:199,0,7	0/0:9,0:24:44.35:0,44,265	0/0:19,0:20:31.95:0,32,325	0/0:10,0:11:7.27:0,7,82	0/0:17,0:19:21.98:0,22,246	1/1:7,0:15:8.98:105,9,0	1/1:7,0:13:6.02:79,6,0	1/1:7,1:18:12.98:179,13,0	1/1:6,0:18:26.01:184,26,0	0/0:22,0:23:26.94:0,27,274	0/0:15,0:12:15.28:0,15,162	0/0:9,0:9:17.90:0,18,176
chr10	72233242	.	AGT	A	2349.58	PASS	AB=0.894;AC=34;AF=0.654;AN=52;BaseQRankSum=4.963;DP=636;FS=8.171;HRun=0;HaplotypeScore=102.2754;InbreedingCoeff=0.0846;MQ=69.65;MQ0=22;MQRankSum=0.020;QD=5.10;ReadPosRankSum=-1.976;VQSLOD=1.4572;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,10:39:38.85:392,39,0	1/1:2,4:6:6.01:66,6,0	./.	./.	1/1:15,5:21:8.82:66,9,0	0/1:16,8:24:19.43:158,0,19	1/1:15,11:27:21.05:230,21,0	0/1:27,0:27:12.45:12,0,18	0/1:13,6:19:23.81:176,0,24	0/1:24,0:23:18.75:29,0,19	0/1:24,0:24:15.28:20,0,15	0/0:11,1:13:21.04:0,21,267	0/1:10,0:10:22.56:23,0,29	1/1:9,9:18:14.88:163,15,0	1/1:10,7:20:23.13:185,23,0	1/1:8,4:14:14.68:116,15,0	0/1:20,0:20:8.01:8,0,35	0/1:17,0:16:13.97:14,0,33	1/1:11,1:11:5.69:44,6,0	1/1:10,4:12:3.01:33,3,0	1/1:20,14:32:12.03:131,12,0	0/0:22,0:20:18:0,18,224	0/0:16,0:16:14.70:0,15,215	0/0:29,1:30:5.75:0,6,451	1/1:26,0:26:9.74:72,10,0	1/1:16,11:27:29.87:290,30,0	0/1:9,11:20:20.94:187,0,21	0/1:11,4:15:58.66:106,0,59
chr10	72233279	.	GTGTGTA	G	1312.89	PASS	AB=0.791;AC=8;AF=0.143;AN=56;BaseQRankSum=5.182;DP=647;FS=3.916;HRun=0;HaplotypeScore=151.8299;InbreedingCoeff=0.6145;MQ=52.91;MQ0=21;MQRankSum=-0.937;QD=11.22;ReadPosRankSum=0.288;VQSLOD=2.7089;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:28:0,28,635	0/0:11,0:11:23.73:0,24,216	0/0:32,0:13:35.98:0,36,335	0/0:34,0:15:44.95:0,45,426	0/0:15,0:15:26.41:0,26,248	0/0:28,0:29:55.77:0,56,725	0/0:27,0:27:34.96:0,35,571	0/0:23,0:23:51.42:0,51,444	0/0:24,0:24:63.01:0,63,758	1/1:6,20:23:58.42:510,58,0	0/1:7,18:25:14.91:127,0,15	0/0:15,0:15:32.93:0,33,781	0/0:8,0:8:14.86:0,15,119	0/0:16,0:16:4.49:0,4,312	0/0:33,0:32:36.95:0,37,762	0/0:21,0:21:0.34:0,0,396	1/1:23,1:25:39.95:406,40,0	0/1:20,0:20:44.50:185,0,44	0/0:15,0:12:24.75:0,25,329	0/0:13,0:11:20.99:0,21,240	0/0:34,0:31:38.19:0,38,456	0/0:18,0:18:38.99:0,39,704	0/0:13,0:13:29.97:0,30,511	0/0:37,0:37:54.12:0,54,1576	1/1:4,17:21:10.61:234,11,0	0/0:31,0:29:50.36:0,50,811	0/0:33,0:32:70.52:0,71,775	0/0:16,0:16:33.32:0,33,524
chr10	72233283	.	GTA	G	1258.51	PASS	AB=0.977;AC=21;AF=0.375;AN=56;BaseQRankSum=12.738;DP=638;FS=20.413;HRun=0;HaplotypeScore=113.0294;InbreedingCoeff=0.1212;MQ=53.72;MQ0=17;MQRankSum=-1.789;QD=3.49;ReadPosRankSum=2.818;VQSLOD=0.5829;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:33:53.12:53,0,179	0/1:10,0:10:23.55:24,0,107	0/0:29,0:13:35.98:0,36,335	0/0:33,0:18:44.12:0,44,450	0/0:15,1:16:13.32:0,13,171	0/0:27,0:27:15.56:0,16,375	0/1:25,0:25:38.33:38,0,194	0/0:19,1:20:12.77:0,13,380	0/1:26,0:26:23.68:24,0,366	1/1:23,0:20:46.75:404,47,0	1/1:24,0:25:5.94:42,6,0	0/0:13,0:13:32.74:0,33,407	0/1:8,1:9:23.22:23,0,83	0/1:15,0:16:52.93:53,0,92	0/0:35,0:34:42.12:0,42,513	0/0:20,1:21:7.51:0,8,317	1/1:25,0:25:31.37:331,31,0	1/1:20,0:20:19.87:221,20,0	0/0:15,1:13:5.58:0,6,222	0/1:14,0:12:0.43:0,0,147	0/1:34,0:31:7.58:8,0,301	0/0:17,0:17:38.99:0,39,439	0/0:14,0:14:2.94:0,3,270	0/0:36,0:36:3.11:0,3,793	1/1:20,0:20:14.52:98,15,0	0/1:33,0:31:58.37:58,0,364	0/1:32,1:32:5.48:5,0,432	0/1:13,1:14:52.31:52,0,169
chr10	72233807	.	T	TG	2803.87	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-4.775;DP=689;FS=17.306;HRun=4;HaplotypeScore=68.7345;InbreedingCoeff=0.9668;MQ=88.97;MQ0=0;MQRankSum=-2.478;QD=33.38;ReadPosRankSum=0.089;VQSLOD=2.0012;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,150,1700	0/0:6,0:6:15.04:0,15,170	0/0:23,0:23:48.10:0,48,530	0/0:28,0:28:61.88:0,62,635	0/0:22,0:22:57.13:0,57,633	0/0:29,0:29:84.24:0,84,952	0/0:25,0:25:75.11:0,75,795	0/0:25,0:25:66.15:0,66,721	0/0:27,0:27:75.20:0,75,841	1/1:3,22:25:63.18:842,63,0	1/1:1,11:12:27.09:369,27,0	0/0:23,0:23:63.18:0,63,714	0/0:25,0:25:66.19:0,66,749	0/0:19,0:19:54.15:0,54,613	0/0:24,0:24:72.18:0,72,805	0/0:27,0:27:75.20:0,75,840	1/1:1,30:31:90.30:1221,90,0	0/0:25,0:25:75.20:0,75,839	0/0:23,0:23:54.15:0,54,611	0/0:19,0:19:51.14:0,51,579	0/0:48,0:48:99:0,123,1385	0/0:14,0:14:36.08:0,36,397	0/0:24,0:24:45.07:0,45,485	0/0:27,0:27:81.22:0,81,907	1/1:0,16:16:39.13:531,39,0	0/0:37,1:38:40.14:0,40,822	0/0:24,0:24:69.20:0,69,783	0/0:2,0:2:6.02:0,6,68
chr10	72234086	.	C	CAGG	16443.14	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-10.917;DP=744;FS=1.655;HRun=0;HaplotypeScore=105.0584;InbreedingCoeff=0.9985;MQ=90.36;MQ0=1;MQRankSum=-10.569;QD=51.07;ReadPosRankSum=3.930;VQSLOD=6.6464;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,38:47:99:2164,99,0	0/0:6,0:6:18.06:0,18,294	0/0:27,0:27:69.19:0,69,1060	0/0:37,0:37:67.17:0,67,1236	0/0:28,0:28:74.99:0,75,1184	0/0:23,0:23:66.23:0,66,1065	0/0:25,0:25:72.22:0,72,1125	0/0:28,0:28:69.23:0,69,1094	0/0:24,0:24:72.25:0,72,1173	1/1:5,26:32:84.29:1800,84,0	1/1:4,17:21:45.15:996,45,0	1/1:1,30:31:84.29:1876,84,0	1/1:1,18:19:51.18:1134,51,0	0/0:23,0:23:69.24:0,69,1127	0/0:27,0:27:72.23:0,72,1146	0/0:31,0:29:87.27:0,87,1347	1/1:4,26:32:60.21:1325,60,0	1/1:2,28:30:75.26:1675,75,0	0/0:19,0:19:48.14:0,48,732	0/0:28,0:28:81.28:0,81,1317	0/0:39,0:38:99:0,102,1627	1/1:4,16:20:42.12:924,42,0	1/1:4,27:32:54.19:1203,54,0	1/1:0,40:41:99:2343,105,0	1/1:1,16:17:45.15:1003,45,0	0/0:24,0:24:72.25:0,72,1176	0/0:25,0:25:69.24:0,69,1125	0/0:8,0:8:24.08:0,24,392
chr10	72234500	.	A	AG	11321.05	PASS	AB=0.920;AC=23;AF=0.411;AN=56;BaseQRankSum=-15.026;DP=725;FS=1.612;HRun=1;HaplotypeScore=66.7214;InbreedingCoeff=0.9264;MQ=85.99;MQ0=0;MQRankSum=-3.552;QD=37.61;ReadPosRankSum=3.864;VQSLOD=5.4529;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:81.27:1206,81,0	0/0:10,0:10:30.03:0,30,340	0/0:23,0:23:66.17:0,66,811	0/0:24,0:24:72.08:0,72,857	0/0:28,0:28:81.23:0,81,1012	0/0:26,0:26:78.25:0,78,1012	0/0:29,0:29:87.28:0,87,1129	0/0:43,0:43:99:0,126,1583	0/0:25,0:25:69.20:0,69,868	1/1:0,23:23:69.23:1031,69,0	1/1:1,27:28:66.22:988,66,0	1/1:1,27:28:75.22:1099,75,0	1/1:0,27:28:78.26:1157,78,0	0/0:28,0:28:81.24:0,81,1023	0/0:34,0:34:96.31:0,96,1246	0/0:31,0:31:93.30:0,93,1208	1/1:0,25:25:63.21:943,63,0	1/1:0,22:22:66.22:989,66,0	0/0:24,0:24:72.23:0,72,922	0/0:13,0:13:39.13:0,39,506	0/0:37,0:37:99:0,108,1387	1/1:0,29:29:78.18:1141,78,0	1/1:1,26:27:69.14:1034,69,0	1/1:0,17:17:48.16:719,48,0	1/1:1,22:23:66.22:989,66,0	0/1:21,2:23:23.72:24,0,711	0/0:32,0:32:96.31:0,96,1243	0/0:17,0:17:51.17:0,51,662
chr10	72235839	.	A	ATTCT	2000.81	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.607;DP=703;FS=12.672;HRun=0;HaplotypeScore=129.6777;InbreedingCoeff=0.9777;MQ=63.68;MQ0=0;MQRankSum=-6.846;QD=11.77;ReadPosRankSum=0.305;VQSLOD=2.6989;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,21:28:45.15:1097,45,0	0/0:12,0:12:24.05:0,24,345	0/0:16,0:14:19.12:0,19,281	0/0:12,0:12:12.04:0,12,181	0/0:33,0:33:81.24:0,81,1250	0/0:31,0:31:63.14:0,63,904	0/0:21,0:21:42.07:0,42,555	0/0:28,0:28:42.08:0,42,512	0/0:22,0:22:63.17:0,63,959	1/1:40,0:40:39.68:342,40,0	1/1:28,0:28:35.56:278,36,0	0/0:30,0:30:66.18:0,66,1003	0/0:29,0:29:69.18:0,69,1050	0/0:25,0:25:63.15:0,63,929	0/0:31,0:32:63.19:0,63,987	0/0:21,0:21:51.08:0,51,732	1/1:16,0:16:9.86:79,10,0	1/1:23,0:22:17.48:118,17,0	0/0:12,0:12:18.04:0,18,250	0/0:26,0:26:57.18:0,57,910	0/0:17,0:17:45.13:0,45,689	0/0:35,0:35:77.32:0,77,1032	0/0:27,0:27:66.16:0,66,1001	0/0:26,0:27:69.04:0,69,898	1/1:35,0:35:38.58:272,39,0	0/0:31,0:31:51.13:0,51,744	0/0:37,0:37:66.12:0,66,930	0/0:9,0:9:21.05:0,21,318
chr10	72236065	.	G	GA	1443.57	PASS	AB=0.656;AC=8;AF=0.143;AN=56;BaseQRankSum=-5.184;DP=588;FS=4.619;HRun=11;HaplotypeScore=65.4928;InbreedingCoeff=0.7605;MQ=59.06;MQ0=11;MQRankSum=-2.248;QD=13.37;ReadPosRankSum=1.417;VQSLOD=3.8799;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,2:28:37.27:0,37,459	0/0:10,0:10:23.91:0,24,186	0/0:9,0:2:5.98:0,6,46	0/0:15,1:9:17.16:0,17,123	0/0:28,0:30:70.35:0,70,534	0/0:16,1:17:17.38:0,17,318	0/0:20,2:22:22.36:0,22,344	0/0:23,0:22:46.82:0,47,354	0/0:20,0:20:38.82:0,39,301	0/0:18,0:18:43.87:0,44,331	0/0:13,0:14:25.91:0,26,191	0/1:8,13:23:4.71:291,0,5	1/1:9,18:28:43.87:443,44,0	0/0:23,1:25:22.35:0,22,340	0/0:17,0:17:38.84:0,39,302	0/0:26,1:28:37.34:0,37,463	0/0:27,1:29:39.57:0,40,478	0/0:21,0:24:50.90:0,51,366	0/0:19,0:18:32.55:0,33,242	0/0:17,0:18:31.89:0,32,235	0/0:30,0:29:66.54:0,67,492	1/1:8,14:21:12.84:312,13,0	0/1:7,5:11:3.84:132,0,4	1/1:3,17:22:35.28:416,35,0	0/0:22,0:22:49.84:0,50,377	0/0:22,0:20:31.88:0,32,238	0/0:23,0:25:30.81:0,31,359	0/0:8,0:9:22.95:0,23,168
chr10	72237846	.	CAA	C	1432.29	PASS	AB=0.696;AC=15;AF=0.268;AN=56;BaseQRankSum=11.627;DP=611;FS=5.670;HRun=16;HaplotypeScore=88.8982;InbreedingCoeff=0.3803;MQ=65.21;MQ0=1;MQRankSum=-2.050;QD=6.57;ReadPosRankSum=9.119;VQSLOD=0.2196;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,18:33:24.07:326,24,0	0/0:12,0:16:42.01:0,42,439	0/1:27,1:18:52.03:52,0,124	0/0:17,0:14:7.28:0,7,83	0/0:30,1:32:40.34:0,40,635	0/0:20,0:34:60.49:0,60,584	0/0:17,0:20:32.38:0,32,292	0/0:31,0:34:53.41:0,53,545	0/0:16,0:20:43.81:0,44,448	0/1:10,9:25:10.28:167,0,10	0/1:2,7:9:2.77:129,0,3	0/1:12,3:18:24.82:74,0,25	0/1:13,7:26:4.34:64,0,4	0/0:20,0:20:35.97:0,36,337	0/0:20,0:24:35.98:0,36,345	0/0:27,1:27:46.86:0,47,610	1/1:6,7:14:3.75:151,4,0	0/0:4,0:7:5.36:0,5,31	0/0:21,0:27:27.21:0,27,447	0/0:22,1:27:27.65:0,28,462	0/0:17,0:19:45.36:0,45,431	1/1:10,11:24:23.14:215,23,0	1/1:4,9:15:19.62:202,20,0	0/1:10,4:15:27.93:91,0,28	0/1:2,6:11:27.37:134,0,27	0/0:19,1:23:14.43:0,14,213	0/0:27,0:28:55.75:0,56,547	0/0:17,0:17:33:0,33,340
chr10	72241207	.	TAA	T	3632.04	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.236;DP=558;FS=0.949;HRun=2;HaplotypeScore=89.9903;InbreedingCoeff=0.9807;MQ=66.13;MQ0=1;MQRankSum=-0.992;QD=39.48;ReadPosRankSum=3.594;VQSLOD=3.8557;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:72.25:0,72,1375	0/0:5,0:5:15.05:0,15,305	0/0:23,0:21:63:0,63,1168	0/0:20,0:18:47.92:0,48,807	0/0:33,0:33:99:0,99,1941	0/0:14,0:14:42.14:0,42,830	0/0:16,0:16:48.16:0,48,975	0/0:19,0:19:57.18:0,57,1113	0/0:18,0:18:51.18:0,51,1026	0/0:26,0:26:69.24:0,69,1400	0/0:20,0:20:57.19:0,57,1124	1/1:0,16:16:41.96:685,42,0	1/1:1,26:27:68.71:1097,69,0	0/0:13,0:13:33.11:0,33,643	0/0:23,0:23:69.24:0,69,1384	0/0:22,0:22:66.21:0,66,1254	0/0:29,0:29:84.29:0,84,1649	0/0:14,0:14:8.45:0,8,630	0/0:13,0:13:39.13:0,39,759	0/0:28,0:28:84.29:0,84,1688	0/0:26,0:26:78.27:0,78,1540	1/1:0,14:14:33.11:538,33,0	1/1:0,21:21:48.16:783,48,0	1/1:1,13:14:33.11:529,33,0	0/0:19,0:19:51.16:0,51,993	0/0:30,0:30:87.30:0,87,1724	0/0:20,0:20:60.21:0,60,1204	0/0:8,0:8:24.08:0,24,464
chr10	72243527	.	TTG	T	232.60	PASS	AB=0.930;AC=14;AF=0.250;AN=56;BaseQRankSum=5.712;DP=648;FS=7.706;HRun=0;HaplotypeScore=110.6038;InbreedingCoeff=-0.1492;MQ=65.94;MQ0=13;MQRankSum=1.132;QD=0.76;ReadPosRankSum=4.269;VQSLOD=1.3960;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:40:4.75:5,0,12	0/1:11,1:12:8.08:8,0,350	0/0:48,0:27:39.04:0,39,507	0/0:43,0:28:27.56:0,28,368	0/1:13,4:18:91.34:91,0,465	0/0:20,0:20:13.93:0,14,599	0/1:15,1:17:25.26:25,0,236	0/1:41,2:43:23.97:24,0,542	0/1:19,1:20:2.06:2,0,432	0/0:17,0:16:36.96:0,37,257	0/0:13,0:13:0.67:0,1,22	0/0:21,0:21:8.75:0,9,265	0/0:26,0:26:6.21:0,6,342	0/1:21,1:22:3.02:3,0,632	0/0:26,2:28:31.04:0,31,935	0/1:24,3:27:13.16:13,0,737	0/0:16,0:15:8.89:0,9,50	1/1:15,0:15:9.53:46,10,0	0/0:14,0:14:15.05:0,15,208	0/0:17,0:17:24.08:0,24,366	0/0:33,0:33:22.65:0,23,940	0/1:21,0:20:0.82:1,0,131	0/1:24,0:24:39.92:40,0,87	0/1:32,0:31:12.13:12,0,303	0/0:18,0:18:3:0,3,26	0/1:11,4:15:99:103,0,209	0/0:17,1:18:9.98:0,10,621	0/0:10,0:10:5.28:0,5,356
chr10	72243547	.	GTGTGT	G	952.79	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=6.960;DP=691;FS=13.884;HRun=0;HaplotypeScore=135.5685;InbreedingCoeff=0.3046;MQ=55.92;MQ0=48;MQRankSum=-1.468;QD=4.89;ReadPosRankSum=0.376;VQSLOD=1.1619;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:51,0:46:40.88:495,41,0	0/0:12,0:12:33.11:0,33,778	0/0:65,0:26:62.23:0,62,947	0/0:52,0:22:42.89:0,43,626	0/0:20,0:20:51.23:0,51,1018	0/0:24,0:24:69.11:0,69,1353	0/0:9,0:9:15.30:0,15,397	0/0:29,0:29:72.23:0,72,1324	0/0:16,0:15:45.15:0,45,1119	0/1:21,0:19:88.34:88,0,324	0/0:11,0:11:0.68:0,1,45	0/0:25,0:21:23.56:0,24,384	0/0:27,0:22:23.68:0,24,438	0/0:25,0:25:63.21:0,63,1439	0/0:26,0:26:75.22:0,75,1787	0/0:27,0:27:69.23:0,69,1743	0/1:20,0:17:2.25:2,0,86	1/1:5,13:16:18.04:309,18,0	0/0:12,0:12:27.09:0,27,489	0/0:15,0:14:39.13:0,39,804	0/0:39,0:39:93.79:0,94,2086	0/1:19,0:18:14.92:15,0,179	0/1:27,0:25:88.01:107,0,88	0/1:39,0:35:81.73:82,0,475	0/0:18,0:18:3.01:0,3,51	0/0:15,0:15:39.12:0,39,708	0/0:18,0:18:54.18:0,54,1347	0/0:11,0:11:33.06:0,33,668
chr10	72243549	.	GTGT	G	1957.91	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=5.571;DP=690;FS=7.651;HRun=0;HaplotypeScore=113.2112;InbreedingCoeff=0.7162;MQ=55.91;MQ0=49;MQRankSum=-0.303;QD=7.80;ReadPosRankSum=1.756;VQSLOD=1.8306;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:52,0:47:41.69:459,42,0	0/0:11,0:11:32.70:0,33,622	0/0:66,0:27:67.09:0,67,1004	0/0:52,0:22:42.08:0,42,637	0/0:20,0:20:47.61:0,48,832	0/0:24,0:24:68.76:0,69,1130	0/0:10,0:10:15.46:0,15,369	0/0:27,0:27:71.33:0,71,1201	0/0:16,0:15:47.75:0,48,887	0/1:21,0:19:64.33:146,0,64	0/0:11,0:11:0.65:0,1,19	1/1:24,2:22:14.07:207,14,0	1/1:25,2:22:4.60:243,5,0	0/0:22,0:22:62.79:0,63,1164	0/0:27,0:27:77.82:0,78,1499	0/0:26,0:26:68.41:0,68,1328	0/1:20,0:17:30.46:53,0,30	1/1:18,0:16:18.03:194,18,0	0/0:11,0:11:30.10:0,30,486	0/0:14,0:13:39.13:0,39,699	0/0:39,0:38:91.41:0,91,1760	1/1:18,1:18:8.17:145,8,0	1/1:24,3:25:23.85:337,24,0	1/1:39,2:37:17.08:362,17,0	0/0:18,0:18:2.99:0,3,24	0/0:15,0:15:40.86:0,41,582	0/0:19,0:19:56.78:0,57,1088	0/0:11,0:11:33.01:0,33,595
chr10	72243551	.	GTTGTGTC	G	1842.79	PASS	AB=0.910;AC=11;AF=0.196;AN=56;BaseQRankSum=3.347;DP=691;FS=16.602;HRun=0;HaplotypeScore=151.6243;InbreedingCoeff=0.1550;MQ=55.76;MQ0=50;MQRankSum=-2.747;QD=7.46;ReadPosRankSum=0.001;VQSLOD=1.8855;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,38:47:40.66:1013,41,0	0/0:11,0:11:33.11:0,33,1011	0/0:67,0:28:73.53:0,74,1257	0/0:51,0:21:42.72:0,43,794	0/0:20,0:20:47.61:0,48,1166	0/0:23,0:23:68.82:0,69,1727	0/0:11,0:11:27.09:0,27,623	0/0:28,0:28:74.34:0,74,1560	0/0:17,0:16:51.18:0,51,1696	0/1:19,0:19:71.29:71,0,539	0/0:11,0:12:0.58:0,1,46	0/1:21,0:21:99:145,0,674	0/1:26,0:22:99:150,0,684	0/0:21,0:21:62.79:0,63,1801	0/0:27,0:27:78.23:0,78,2296	0/0:27,0:27:74.84:0,75,2431	0/1:18,0:17:34.41:34,0,108	1/1:14,0:15:13.22:74,13,0	0/0:11,0:11:30.10:0,30,541	0/0:15,0:14:42.14:0,42,1103	0/0:36,0:36:91.43:0,91,2644	0/1:17,0:18:85.69:86,0,289	0/1:23,0:23:99:199,0,172	0/1:36,0:37:99:227,0,787	0/0:19,0:19:3.01:0,3,84	0/0:16,0:16:47.34:0,47,1143	0/0:20,0:20:57.20:0,57,1862	0/0:11,0:11:33.04:0,33,747
chr10	72243552	.	T	TGTGTGTGTG	1535.05	PASS	AB=0.663;AC=14;AF=0.250;AN=56;BaseQRankSum=0.663;DP=693;FS=2.926;HRun=0;HaplotypeScore=176.2530;InbreedingCoeff=0.3675;MQ=56.06;MQ0=50;MQRankSum=-2.863;QD=6.00;ReadPosRankSum=-0.832;VQSLOD=2.7953;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:44:99:135,0,290	0/0:11,0:11:33.11:0,33,829	0/0:65,0:27:71.82:0,72,1027	0/0:51,0:21:40.33:0,40,614	0/0:20,0:20:57.17:0,57,1135	0/0:23,0:23:68.17:0,68,1358	0/0:10,0:10:27.08:0,27,635	0/0:26,0:26:75.16:0,75,1501	0/0:17,0:16:51.17:0,51,1168	1/1:3,0:19:48.16:950,48,0	1/1:1,0:13:2.66:81,3,0	0/0:6,0:21:16.95:0,17,432	0/1:3,0:19:0.33:0,0,386	0/0:21,0:21:63.17:0,63,1545	0/0:27,0:27:78.23:0,78,2029	0/0:30,0:30:75.22:0,75,1840	1/1:2,1:20:9.03:257,9,0	0/1:18,0:17:53.48:53,0,208	0/0:10,0:10:30.10:0,30,495	0/0:15,0:14:42.13:0,42,839	0/0:39,0:38:91.22:0,91,2055	0/1:4,0:18:15.36:15,0,143	0/1:6,0:23:60.59:61,0,100	0/1:8,0:38:7.76:8,0,494	1/1:0,1:21:3.01:132,3,0	0/0:16,0:16:48.15:0,48,938	0/0:20,0:20:57.19:0,57,1434	0/0:11,0:11:27.25:0,27,746
chr10	72243556	.	GTC	G	211.97	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=7.193;DP=691;FS=3.957;HRun=0;HaplotypeScore=110.1384;InbreedingCoeff=0.5574;MQ=56.26;MQ0=47;MQRankSum=-4.201;QD=2.02;ReadPosRankSum=0.049;VQSLOD=1.8941;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:39,11:44:41.31:303,41,0	0/0:12,0:12:33.11:0,33,571	0/0:60,0:24:50.32:0,50,777	0/0:52,0:23:48.26:0,48,632	0/0:18,0:18:48.13:0,48,743	0/0:21,0:21:57.15:0,57,966	0/0:11,0:11:30.09:0,30,456	0/0:29,0:29:75.18:0,75,1110	0/0:18,0:17:54.15:0,54,954	0/1:23,0:21:11.28:11,0,415	1/1:13,0:13:1.16:3,1,0	0/0:26,0:22:51.09:0,51,372	0/0:25,0:20:57.88:0,58,434	0/0:21,0:21:63.19:0,63,1061	0/0:27,0:27:75.24:0,75,1277	0/0:34,0:34:96.29:0,96,1657	0/1:19,0:16:0.96:1,0,45	0/0:19,0:17:21.23:0,21,177	0/0:11,0:11:33.05:0,33,438	0/0:15,0:14:42.11:0,42,703	0/0:40,0:39:99:0,99,1627	0/0:17,0:16:28.94:0,29,208	0/0:23,0:21:25.34:0,25,151	0/0:42,0:38:77.99:0,78,594	0/0:14,0:14:8.98:0,9,86	0/0:20,0:20:57.14:0,57,881	0/0:20,0:20:54.16:0,54,947	0/0:11,0:11:19.71:0,20,424
chr10	72244273	.	G	GTAAC	13392.77	PASS	AB=0.917;AC=23;AF=0.411;AN=56;BaseQRankSum=-3.479;DP=490;FS=4.552;HRun=0;HaplotypeScore=76.1948;InbreedingCoeff=0.9062;MQ=80.03;MQ0=0;MQRankSum=-5.680;QD=64.70;ReadPosRankSum=3.209;VQSLOD=7.0605;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:29:78.27:2133,78,0	0/0:7,0:7:21.07:0,21,407	0/0:17,0:17:48.03:0,48,868	0/0:12,0:13:19.40:0,19,643	0/0:21,0:21:63.22:0,63,1220	0/0:22,0:22:63.22:0,63,1221	0/0:8,0:8:18.05:0,18,316	0/0:44,0:44:99:0,132,2383	0/0:16,0:16:45.14:0,45,838	1/1:2,22:25:75.23:1944,75,0	1/1:2,17:21:54.06:1349,54,0	1/1:1,12:14:36.04:918,36,0	1/1:0,15:17:42.14:1146,42,0	0/0:9,0:9:27.09:0,27,494	0/0:23,0:23:66.21:0,66,1237	0/0:22,0:22:63.20:0,63,1170	1/1:1,19:22:60.21:1641,60,0	1/1:2,13:16:45.15:1206,45,0	0/0:17,0:17:45.15:0,45,859	0/0:18,0:18:51.16:0,51,955	0/0:18,0:18:54.17:0,54,1004	1/1:0,7:7:21.07:573,21,0	1/1:0,6:7:18.06:491,18,0	1/1:1,4:5:9.50:247,10,0	1/1:0,21:21:60.21:1640,60,0	0/1:20,2:22:99:104,0,982	0/0:25,0:25:75.26:0,75,1454	0/0:3,0:3:9.03:0,9,174
chr10	72246233	.	AT	A	262.14	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.962;DP=564;FS=3.637;HRun=9;HaplotypeScore=52.8996;InbreedingCoeff=0.9957;MQ=81.07;MQ0=0;MQRankSum=0.252;QD=15.42;ReadPosRankSum=0.552;VQSLOD=3.6917;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:39.02:357,39,0	0/0:15,0:15:39.12:0,39,450	0/0:23,0:21:35.42:0,35,367	0/0:13,1:14:22.49:0,22,311	0/0:33,0:33:90.26:0,90,1029	0/0:25,0:25:72.21:0,72,831	0/0:12,0:12:33.07:0,33,362	0/0:37,0:37:84.22:0,84,946	0/0:17,0:17:42.12:0,42,485	0/0:26,0:26:78.20:0,78,871	0/0:22,0:22:60.18:0,60,690	0/0:13,0:13:33.10:0,33,381	0/0:18,0:18:54.15:0,54,615	0/0:17,0:17:45.13:0,45,519	0/0:17,0:17:42.11:0,42,474	0/0:17,0:17:51.15:0,51,589	0/0:18,0:18:45.12:0,45,511	0/0:16,0:16:36.11:0,36,415	0/0:24,0:24:60.17:0,60,682	0/0:24,0:24:57.16:0,57,650	0/0:17,0:17:45.13:0,45,519	0/0:18,0:18:48.14:0,48,546	0/0:21,0:21:57.17:0,57,658	0/0:13,0:13:39.12:0,39,450	0/0:18,0:18:48.14:0,48,554	0/0:32,0:32:90.26:0,90,1031	0/0:26,1:27:50.75:0,51,827	0/0:13,0:13:33.10:0,33,381
chr10	72247331	.	G	GGTT	8370.50	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-11.224;DP=724;FS=15.416;HRun=0;HaplotypeScore=98.0319;InbreedingCoeff=0.9999;MQ=80.59;MQ0=0;MQRankSum=-3.782;QD=54.71;ReadPosRankSum=2.306;VQSLOD=6.2841;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1599	0/0:13,0:13:33.11:0,33,533	0/0:23,0:22:51.17:0,51,818	0/0:18,0:18:42.14:0,42,664	0/0:30,0:30:87.28:0,87,1394	0/0:26,0:26:75.23:0,75,1177	0/0:22,0:22:63.18:0,63,974	0/0:40,0:40:99:0,111,1763	0/0:37,0:37:99:0,105,1713	0/0:21,0:21:60.20:0,60,959	0/0:13,0:13:39.13:0,39,634	1/1:4,29:34:84.29:1866,84,0	1/1:3,32:35:89.97:2006,90,0	0/0:19,0:19:51.16:0,51,808	0/0:33,0:33:90.30:0,90,1447	0/0:34,0:34:99:0,99,1554	0/0:25,0:25:66.23:0,66,1078	0/0:22,0:22:60.20:0,60,980	0/0:19,0:19:54.16:0,54,852	0/0:22,0:22:57.19:0,57,931	0/0:38,0:38:99:0,105,1642	1/1:4,21:28:66.18:1369,66,0	1/1:3,19:22:57.20:1267,57,0	1/1:1,31:34:84.76:1862,85,0	0/0:27,0:27:72.25:0,72,1175	0/0:28,0:28:78.27:0,78,1273	0/0:14,0:14:39.13:0,39,636	0/0:12,0:12:36.12:0,36,580
chr10	72247797	.	C	CGGCGG	977.36	PASS	AB=0.996;AC=25;AF=0.500;AN=50;BaseQRankSum=-2.397;DP=149;FS=2.638;HRun=0;HaplotypeScore=46.5016;InbreedingCoeff=0.2137;MQ=65.80;MQ0=0;MQRankSum=-1.554;QD=9.40;ReadPosRankSum=-4.388;VQSLOD=-0.1131;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:3.01:84,3,0	0/1:4,0:4:6.43:6,0,83	0/0:2,0:1:3.01:0,3,46	0/0:2,0:2:5.58:0,6,34	0/0:3,0:3:3.01:0,3,52	./.	0/1:9,0:9:30.36:30,0,122	./.	0/1:4,0:4:10.16:31,0,10	0/1:3,0:3:19.98:20,0,29	1/1:3,0:3:5.98:47,6,0	1/1:1,0:1:3.01:75,3,0	1/1:3,0:3:8.93:124,9,0	0/0:4,0:4:0.39:0,0,55	1/1:2,0:2:2.98:21,3,0	./.	0/0:20,0:20:12.21:0,12,551	1/1:1,10:11:12.04:308,12,0	0/0:3,0:3:9.03:0,9,115	1/1:2,0:2:0.89:2,1,0	0/1:45,0:46:88.50:89,0,994	1/1:3,0:3:0.89:2,1,0	1/1:1,2:3:2.81:162,3,0	1/1:1,6:7:6.02:125,6,0	0/0:3,0:3:9.03:0,9,123	0/0:3,0:3:3.01:0,3,44	0/0:1,0:1:3.01:0,3,38	0/0:3,0:3:6.02:0,6,77
chr10	72248928	.	A	AT	1501.79	PASS	AB=0.979;AC=11;AF=0.196;AN=56;BaseQRankSum=-0.910;DP=466;FS=6.353;HRun=6;HaplotypeScore=77.3353;InbreedingCoeff=0.8696;MQ=80.10;MQ0=8;MQRankSum=-1.225;QD=14.58;ReadPosRankSum=0.187;VQSLOD=3.1279;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:27:0,27,254	0/0:3,0:3:6.01:0,6,61	0/0:41,0:26:34.63:0,35,324	0/1:45,0:23:3.13:3,0,106	0/0:20,0:20:57.13:0,57,581	0/0:21,0:21:29.23:0,29,467	0/0:4,0:4:12.03:0,12,122	0/0:14,0:14:36.08:0,36,367	0/0:9,0:9:21.05:0,21,213	0/0:19,0:19:54.10:0,54,539	0/0:23,0:23:54.11:0,54,550	1/1:0,16:16:39.12:491,39,0	1/1:0,10:10:24.08:302,24,0	0/0:7,0:7:18.03:0,18,178	0/0:11,1:12:11.60:0,12,236	0/0:24,0:24:63.09:0,63,625	0/0:28,0:28:84.18:0,84,850	0/0:20,0:20:54.10:0,54,543	0/0:5,0:5:15.03:0,15,153	0/0:20,0:20:57.10:0,57,569	0/0:9,0:9:27.06:0,27,275	1/1:3,6:9:12.28:218,12,0	1/1:2,15:17:39.06:471,39,0	1/1:0,5:5:15.05:189,15,0	0/0:27,0:27:78.14:0,78,775	0/0:21,0:21:60.13:0,60,612	0/0:16,0:16:42.09:0,42,426	0/0:11,0:11:24.04:0,24,245
chr10	72250005	.	T	TA	9544.94	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-12.059;DP=681;FS=1.754;HRun=0;HaplotypeScore=68.2754;InbreedingCoeff=0.9999;MQ=67.38;MQ0=3;MQRankSum=-0.426;QD=41.14;ReadPosRankSum=2.653;VQSLOD=5.6446;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1423	0/0:11,0:11:33.11:0,33,461	0/0:26,0:24:62.16:0,62,838	0/0:30,0:28:77.65:0,78,995	0/0:17,0:17:51.17:0,51,712	0/0:17,0:17:51.16:0,51,695	0/0:22,0:22:66.22:0,66,923	0/0:22,0:22:63.19:0,63,851	0/0:22,0:22:63.21:0,63,880	1/1:0,29:29:84.27:1314,84,0	1/1:0,24:24:66.23:1052,66,0	1/1:2,20:22:60.20:959,60,0	1/1:0,28:28:75.26:1198,75,0	0/0:34,0:34:99:0,102,1390	0/0:31,0:31:93.29:0,93,1270	0/0:34,0:34:99:0,102,1424	1/1:1,20:21:49.05:769,49,0	1/1:0,28:28:60.20:958,60,0	0/0:20,0:19:54.15:0,54,720	0/0:20,0:20:60.19:0,60,820	0/0:35,0:35:99:0,102,1393	1/1:1,17:18:45.15:707,45,0	1/1:1,16:17:42.14:670,42,0	1/1:1,24:25:63.21:1007,63,0	1/1:0,20:20:57.19:911,57,0	0/0:34,0:34:72.39:0,72,1315	0/0:28,0:28:78.26:0,78,1090	0/0:12,0:12:36.11:0,36,484
chr10	72250265	.	C	CG	3767.11	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.927;DP=701;FS=14.234;HRun=6;HaplotypeScore=69.5502;InbreedingCoeff=0.9961;MQ=89.41;MQ0=0;MQRankSum=-2.429;QD=29.43;ReadPosRankSum=0.880;VQSLOD=3.0363;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:72.20:0,72,789	0/0:6,0:6:15.03:0,15,153	0/0:19,0:20:49.59:0,50,469	0/0:31,0:32:69.29:0,69,649	0/0:43,0:43:99:0,111,1094	0/0:21,0:21:60.13:0,60,612	0/0:27,0:27:63.14:0,63,643	0/0:18,0:18:30.06:0,30,306	0/0:23,0:23:63.13:0,63,636	0/0:32,0:32:87.19:0,87,887	0/0:26,0:26:75.17:0,75,764	1/1:3,25:28:60.19:755,60,0	1/1:3,23:26:63.20:790,63,0	0/0:22,0:22:60.12:0,60,605	0/0:28,0:28:78.17:0,78,795	0/0:32,0:32:87.16:0,87,877	0/0:31,0:31:84.19:0,84,857	0/0:20,0:20:45.10:0,45,458	0/0:18,0:18:45.10:0,45,458	0/0:30,0:30:90.18:0,90,904	0/0:23,0:23:63.12:0,63,634	1/1:2,18:20:51.16:642,51,0	1/1:2,28:30:69.22:863,69,0	1/1:3,21:24:57.18:717,57,0	0/0:24,0:24:66.15:0,66,673	0/0:32,0:32:81.18:0,81,826	0/0:20,0:20:48.10:0,48,489	0/0:13,0:13:36.05:0,36,357
chr10	72251970	.	CTAGAACACTG	C	2554.85	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.964;DP=757;FS=10.356;HRun=0;HaplotypeScore=216.6796;InbreedingCoeff=0.8971;MQ=69.85;MQ0=3;MQRankSum=-7.023;QD=17.62;ReadPosRankSum=1.473;VQSLOD=1.5342;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,5:23:6.02:165,6,0	0/0:8,0:8:18.06:0,18,783	0/0:28,0:25:6.49:0,6,85	0/0:38,0:32:8.94:0,9,122	0/0:33,0:33:66.23:0,66,2844	0/0:28,0:28:51.18:0,51,2169	0/0:25,0:25:39.12:0,39,1276	0/0:31,0:31:12.04:0,12,269	0/0:27,0:27:39.12:0,39,1393	0/0:38,0:46:87.30:0,87,2947	0/0:28,0:31:38.10:0,38,833	1/1:12,20:32:33.11:969,33,0	1/1:16,7:23:6.02:176,6,0	0/0:23,0:23:39.12:0,39,1309	0/0:33,0:33:54.19:0,54,2443	0/0:25,0:25:45.15:0,45,1611	0/0:24,0:28:28.34:0,28,893	0/0:12,0:18:18.06:0,18,672	0/0:26,0:26:33.11:0,33,1408	0/0:24,0:24:48.16:0,48,1954	0/0:39,0:39:60.21:0,60,2558	1/1:15,17:32:27.09:713,27,0	1/1:9,10:19:15.05:440,15,0	1/1:9,6:15:9.03:264,9,0	0/0:34,0:37:75.24:0,75,1806	0/0:35,0:35:49.41:0,49,1946	0/0:22,0:22:39.13:0,39,1682	0/0:7,0:7:15.05:0,15,608
chr10	72252863	.	GT	G	1154.46	PASS	AB=0.808;AC=14;AF=0.250;AN=56;BaseQRankSum=10.339;DP=609;FS=2.380;HRun=14;HaplotypeScore=70.3796;InbreedingCoeff=0.6071;MQ=71.66;MQ0=5;MQRankSum=0.408;QD=5.98;ReadPosRankSum=1.950;VQSLOD=2.6953;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,1:39:57.95:180,58,0	0/0:7,1:9:3.31:0,3,161	0/1:38,0:15:2.28:3,0,2	0/0:19,0:12:10.23:0,10,93	0/0:23,1:24:36.36:0,36,457	0/0:20,2:22:12.87:0,13,397	0/0:20,1:21:33.46:0,33,443	0/0:29,1:30:18.45:0,18,310	0/0:22,0:22:27.59:0,28,352	0/0:26,0:26:42.47:0,42,512	0/0:10,3:14:6.27:0,6,184	1/1:2,24:26:53.56:370,54,0	1/1:5,11:15:26.35:174,26,0	0/0:18,1:20:18.25:0,18,294	0/0:24,2:27:39.26:0,39,477	0/0:24,1:27:39.10:0,39,464	0/0:19,1:22:42.64:0,43,518	0/0:15,2:17:0.71:0,1,274	0/0:27,1:27:59.77:0,60,513	0/0:12,0:16:41.56:0,42,335	0/0:15,0:15:39.02:0,39,356	0/1:2,8:10:13.04:67,0,13	1/1:5,12:17:31.71:208,32,0	1/1:0,15:15:41.66:288,42,0	0/0:17,0:20:21.15:0,21,299	0/0:32,3:36:39.54:0,40,580	0/1:18,2:19:4.27:4,0,228	0/1:7,3:10:37.71:38,0,115
chr10	72253032	.	C	CT	312.85	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.848;DP=470;FS=6.526;HRun=11;HaplotypeScore=77.6311;InbreedingCoeff=0.7699;MQ=67.45;MQ0=0;MQRankSum=-0.512;QD=11.59;ReadPosRankSum=-2.339;VQSLOD=2.7343;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,17:24:37.47:407,37,0	0/0:8,0:8:20.88:0,21,159	0/0:11,0:5:2.66:0,3,11	0/0:18,0:16:18.81:0,19,164	0/0:28,1:29:37.51:0,38,458	0/0:9,0:9:23.90:0,24,184	0/0:12,0:12:23.88:0,24,186	0/0:31,0:30:68.67:0,69,532	0/0:12,0:11:29.89:0,30,232	0/0:23,0:23:40.49:0,40,117	0/0:18,0:18:18.77:0,19,54	0/0:16,0:16:24.44:0,24,71	0/0:7,0:7:12.22:0,12,35	0/0:11,0:12:31.90:0,32,234	0/0:17,0:18:43.84:0,44,328	0/0:16,0:17:34.87:0,35,261	0/0:26,0:26:38.69:0,39,112	0/0:20,0:19:27.72:0,28,80	0/0:15,0:14:35.84:0,36,278	0/0:24,0:24:65.72:0,66,509	0/0:10,0:10:20.90:0,21,163	0/0:11,0:11:10.17:0,10,29	0/0:12,0:12:21.01:0,21,64	0/0:12,0:12:14.25:0,14,41	0/0:21,0:21:31.26:0,31,95	0/0:17,0:17:41.82:0,42,321	0/0:22,0:23:61.80:0,62,470	0/0:11,0:11:23.90:0,24,186
chr10	72253041	.	TTTA	T	1448.28	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=12.260;DP=463;FS=1.614;HRun=0;HaplotypeScore=83.2226;InbreedingCoeff=0.9830;MQ=67.27;MQ0=2;MQRankSum=-0.799;QD=9.05;ReadPosRankSum=4.860;VQSLOD=2.5025;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:26:16.07:0,16,343	0/0:8,0:8:24.07:0,24,484	0/0:16,0:4:11.92:0,12,137	0/0:21,0:17:40.48:0,40,670	0/0:27,0:27:75.19:0,75,1547	0/0:10,0:10:30.09:0,30,594	0/0:11,0:11:30.10:0,30,674	0/0:28,0:27:75.25:0,75,1642	0/0:11,0:10:30.10:0,30,675	1/1:25,0:25:28.69:256,29,0	1/1:14,0:14:24.63:96,25,0	1/1:15,0:15:29.82:102,30,0	1/1:8,0:8:14.85:51,15,0	0/0:12,0:12:36.11:0,36,706	0/0:18,0:18:48.16:0,48,1040	0/0:14,0:14:42.14:0,42,902	1/1:26,0:26:50.01:182,50,0	1/1:3,17:18:20.84:612,21,0	0/0:17,0:16:48.13:0,48,960	0/0:24,0:24:72.23:0,72,1583	0/0:11,0:11:33.07:0,33,612	1/1:6,1:7:12.87:83,13,0	1/1:11,0:11:23.20:80,23,0	1/1:11,0:11:17.47:60,17,0	1/1:22,1:23:22.87:145,23,0	0/0:16,0:16:48.15:0,48,994	0/0:22,0:22:66.22:0,66,1442	0/0:8,0:8:24.08:0,24,551
chr10	72253042	.	TTA	T	4652.76	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=10.477;DP=456;FS=0.000;HRun=0;HaplotypeScore=63.1024;InbreedingCoeff=0.9086;MQ=66.29;MQ0=2;MQRankSum=1.034;QD=24.88;ReadPosRankSum=4.287;VQSLOD=5.2171;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:25:11.16:11,0,76	0/0:8,0:8:24.06:0,24,379	0/0:14,0:2:5.91:0,6,68	0/0:20,0:16:29.10:0,29,481	0/0:27,0:27:73.05:0,73,1203	0/0:10,0:10:30.06:0,30,460	0/0:11,0:11:30.10:0,30,532	0/0:27,0:26:75.24:0,75,1298	0/0:11,0:10:30.10:0,30,535	1/1:5,19:24:70.70:896,71,0	1/1:0,14:14:35.94:431,36,0	1/1:0,15:15:36.12:501,36,0	1/1:0,8:8:18.06:250,18,0	0/0:12,0:12:35.96:0,36,540	0/0:18,0:18:48.02:0,48,808	0/0:14,0:14:41.99:0,42,696	1/1:1,25:26:60.16:812,60,0	1/1:20,0:18:37.47:293,37,0	0/0:17,0:16:48.11:0,48,761	0/0:23,0:23:69.23:0,69,1236	0/0:11,0:11:30.08:0,30,473	1/1:1,6:7:15.03:189,15,0	1/1:0,11:11:30.05:394,30,0	1/1:0,11:11:21.07:292,21,0	1/1:1,22:23:45.04:582,45,0	0/0:16,0:16:48.15:0,48,797	0/0:22,0:22:66.02:0,66,1128	0/0:8,0:8:24.08:0,24,438
chr10	72253561	.	AT	A	4279.71	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=11.463;DP=550;FS=2.564;HRun=9;HaplotypeScore=61.4500;InbreedingCoeff=0.9792;MQ=71.06;MQ0=5;MQRankSum=0.408;QD=22.41;ReadPosRankSum=3.001;VQSLOD=5.7855;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1101	0/0:11,0:11:18.05:0,18,208	0/0:25,0:17:32.61:0,33,306	0/0:27,0:16:15.66:0,16,182	0/0:17,0:17:45.13:0,45,520	0/0:17,0:17:48.14:0,48,554	0/0:13,1:14:8.63:0,9,342	0/0:21,0:21:54.14:0,54,607	0/0:19,0:19:51.08:0,51,556	1/1:3,14:17:42.02:384,42,0	1/1:0,14:14:42.02:384,42,0	1/1:1,25:26:69.04:631,69,0	1/1:1,12:13:33.01:302,33,0	0/0:8,0:8:15.04:0,15,173	0/0:17,0:17:42.10:0,42,465	0/0:23,0:23:69.15:0,69,781	1/1:3,22:25:54.03:494,54,0	1/1:5,18:23:48.02:439,48,0	0/0:23,0:23:66.17:0,66,744	0/0:21,0:21:51.15:0,51,589	0/0:20,0:20:60.13:0,60,652	1/1:0,14:14:39.02:357,39,0	1/1:1,17:18:38.71:356,39,0	1/1:6,21:27:66.02:603,66,0	1/1:3,11:14:36.02:328,36,0	0/0:22,2:24:11.22:0,11,623	0/0:29,0:29:81.24:0,81,935	0/0:8,0:8:24.07:0,24,277
chr10	72254207	.	TTGTG	T	2380.45	PASS	AB=0.950;AC=19;AF=0.339;AN=56;BaseQRankSum=8.702;DP=415;FS=3.688;HRun=0;HaplotypeScore=78.5825;InbreedingCoeff=0.8361;MQ=60.88;MQ0=4;MQRankSum=-0.417;QD=18.31;ReadPosRankSum=1.875;VQSLOD=3.3368;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:32:11.81:0,12,192	0/0:4,0:4:9.03:0,9,221	0/0:24,0:10:6.90:0,7,160	0/0:14,0:8:1.52:0,2,69	0/0:6,0:6:12.04:0,12,268	0/0:8,0:8:12.04:0,12,294	0/0:13,0:13:21.07:0,21,508	0/0:44,0:44:76.96:0,77,1607	0/0:18,0:18:48.16:0,48,1176	1/1:5,6:11:18.04:270,18,0	1/1:2,9:11:24.03:352,24,0	1/1:4,6:10:15.05:237,15,0	1/1:6,10:16:15.05:225,15,0	0/0:10,0:11:29.84:0,30,650	0/0:15,0:15:33.11:0,33,797	0/0:7,0:8:23.82:0,24,522	1/1:11,14:25:39.13:644,39,0	0/0:23,0:23:42.14:0,42,1008	0/0:12,0:12:19.86:0,20,350	0/0:13,0:13:30.08:0,30,686	0/0:22,0:21:21.07:0,21,515	1/1:4,6:10:15.05:209,15,0	1/1:3,5:8:9.03:149,9,0	1/1:3,5:8:12.04:198,12,0	1/1:2,9:12:21.01:294,21,0	0/1:18,1:19:6.87:7,0,843	0/0:5,0:5:12.04:0,12,283	0/0:11,0:12:32.85:0,33,747
chr10	72254406	.	TATACACATATGTATAC	T	960.72	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.715;DP=391;FS=0.000;HRun=0;HaplotypeScore=157.9487;InbreedingCoeff=0.8155;MQ=65.91;MQ0=1;MQRankSum=-4.747;QD=56.51;ReadPosRankSum=1.207;VQSLOD=3.3662;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:24.08:1054,24,0	0/0:4,0:4:12.04:0,12,748	0/0:17,0:9:19.88:0,20,278	0/0:13,0:6:8.82:0,9,157	0/0:16,0:16:48.16:0,48,3634	0/0:12,0:12:36.12:0,36,2501	0/0:12,0:12:36.12:0,36,2514	0/0:58,0:58:99:0,156,8240	0/0:13,0:13:39.13:0,39,2969	0/0:15,0:15:45.15:0,45,3038	0/0:17,0:17:48.11:0,48,3008	0/0:6,0:6:18.06:0,18,1186	0/0:6,0:6:18.04:0,18,1036	0/0:15,0:15:45.13:0,45,3197	0/0:9,0:9:27.09:0,27,1844	0/0:10,0:10:27.09:0,27,1781	0/0:15,0:15:45.12:0,45,2907	0/0:10,0:10:30.09:0,30,1711	0/0:22,0:22:63.13:0,63,3061	0/0:12,0:12:36.12:0,36,2818	0/0:5,0:5:15.05:0,15,1045	0/0:4,0:4:12.04:0,12,944	0/0:13,0:13:36.12:0,36,2523	0/0:3,0:3:9.03:0,9,710	0/0:23,0:23:69.24:0,69,5074	0/0:20,0:20:60.21:0,60,4196	0/0:14,0:14:42.14:0,42,2992	0/0:10,0:10:30.10:0,30,2150
chr10	72255229	.	CT	C	1286.70	PASS	AB=0.826;AC=13;AF=0.232;AN=56;BaseQRankSum=5.850;DP=374;FS=4.730;HRun=12;HaplotypeScore=46.2381;InbreedingCoeff=0.6386;MQ=71.84;MQ0=9;MQRankSum=0.774;QD=10.38;ReadPosRankSum=1.794;VQSLOD=2.5983;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:26:34.40:100,34,0	0/0:5,0:5:8.98:0,9,80	0/0:10,0:8:2.49:0,2,20	0/1:11,0:10:8.51:9,0,68	0/0:15,0:15:36.07:0,36,365	0/0:9,0:9:20.97:0,21,195	0/0:11,1:11:0.81:0,1,188	0/0:19,0:19:29.30:0,29,274	0/1:5,1:6:4.80:5,0,134	1/1:3,12:15:35.85:278,36,0	1/1:0,11:11:26.88:208,27,0	0/0:1,0:5:11.53:0,12,73	0/0:5,0:10:26.01:0,26,160	0/0:9,0:9:21.04:0,21,213	0/0:20,0:19:36.03:0,36,351	0/0:6,0:6:15.03:0,15,152	1/1:4,15:16:38.85:302,39,0	0/1:7,11:16:22.03:216,0,22	0/0:14,0:15:32.86:0,33,305	0/0:18,0:18:36.02:0,36,348	0/0:9,0:10:20.85:0,21,189	0/0:4,0:13:28.34:0,28,152	0/0:3,0:12:19.86:0,20,100	0/0:5,0:9:11.51:0,12,66	1/1:1,15:16:44.82:348,45,0	0/0:16,0:17:43.17:0,43,413	0/0:24,1:25:40.38:0,40,585	0/0:9,0:9:27.05:0,27,274
chr10	72255758	.	CAGATAGAT	C	1293.06	PASS	AB=0.833;AC=21;AF=0.457;AN=46;BaseQRankSum=5.135;DP=597;FS=6.044;HRun=0;HaplotypeScore=159.3418;InbreedingCoeff=0.6610;MQ=68.35;MQ0=3;MQRankSum=-5.606;QD=5.75;ReadPosRankSum=-3.134;VQSLOD=1.3365;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,8:33:6.02:111,6,0	0/1:8,1:10:57.75:58,0,81	./.	./.	0/0:15,0:14:18.06:0,18,725	0/0:18,0:20:12.02:0,12,387	0/0:19,0:19:6.01:0,6,117	./.	0/0:22,0:37:29.55:0,30,272	0/0:25,0:25:33.11:0,33,1137	0/0:15,0:15:6.01:0,6,130	1/1:17,0:23:6.02:112,6,0	1/1:26,0:34:15.05:279,15,0	0/0:27,0:27:36.12:0,36,1444	0/0:29,0:29:30.10:0,30,1113	0/0:20,0:21:27.08:0,27,991	0/0:24,0:24:15.05:0,15,467	./.	1/1:21,1:19:3.01:73,3,0	1/1:11,5:16:12.04:291,12,0	./.	1/1:8,0:10:3.01:56,3,0	1/1:9,0:12:6.02:104,6,0	1/1:16,0:19:5.69:67,6,0	0/0:15,0:15:9.03:0,9,363	1/1:15,4:18:9.01:168,9,0	1/1:23,3:26:6.02:145,6,0	0/0:4,3:7:3.01:0,3,58
chr10	72256002	.	C	CT	2768.21	PASS	AB=0.632;AC=19;AF=0.339;AN=56;BaseQRankSum=0.414;DP=444;FS=5.143;HRun=10;HaplotypeScore=43.8272;InbreedingCoeff=0.8945;MQ=63.34;MQ0=2;MQRankSum=0.334;QD=17.30;ReadPosRankSum=0.017;VQSLOD=3.8681;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:31:57.14:607,57,0	0/0:7,0:7:17.98:0,18,148	0/0:3,0:4:5.02:0,5,31	0/0:6,0:6:9.44:0,9,73	0/0:36,0:36:89.79:0,90,728	0/0:16,0:16:44.95:0,45,369	0/0:5,0:5:8.98:0,9,74	0/0:36,0:36:89.83:0,90,732	0/0:16,0:16:13.92:0,14,267	1/1:3,16:19:42.09:439,42,0	0/1:5,7:12:3.63:159,0,4	1/1:14,0:14:32.36:205,32,0	1/1:15,0:15:32.27:195,32,0	0/0:13,0:13:29.92:0,30,242	0/0:8,0:9:22.79:0,23,178	0/0:12,0:12:29.96:0,30,246	1/1:3,25:27:63.16:671,63,0	0/0:21,0:21:52.90:0,53,438	0/0:15,0:15:36.80:0,37,282	0/0:23,0:23:59.60:0,60,479	0/0:12,0:12:29.96:0,30,246	1/1:6,0:6:11.72:69,12,0	1/1:12,0:12:28.69:160,29,0	1/1:7,0:7:11.76:71,12,0	1/1:4,12:16:39.06:403,39,0	0/0:19,0:19:50.93:0,51,419	0/0:23,0:23:68.86:0,69,557	0/0:8,0:8:23.97:0,24,197
chr10	72256004	.	T	TC	1781.24	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=5.552;DP=439;FS=5.060;HRun=0;HaplotypeScore=46.3664;InbreedingCoeff=0.6750;MQ=62.26;MQ0=2;MQRankSum=-0.737;QD=11.57;ReadPosRankSum=2.728;VQSLOD=3.7357;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:2.77:104,0,3	0/0:7,0:7:21.06:0,21,278	0/0:4,0:4:11.99:0,12,119	0/0:5,0:5:9.11:0,9,143	0/0:36,0:36:99:0,108,1407	0/0:16,0:16:48.15:0,48,651	0/0:6,0:6:15.03:0,15,179	0/0:37,0:35:99:0,99,1333	0/0:16,0:16:46:0,46,578	0/1:19,0:19:43.23:43,0,91	0/1:11,0:11:5.71:6,0,125	1/1:1,13:14:33.10:459,33,0	1/1:1,15:16:33.10:460,33,0	0/0:13,0:13:38.94:0,39,484	0/0:9,0:9:23.44:0,23,301	0/0:13,0:13:36.11:0,36,474	1/1:26,0:25:22.82:107,23,0	0/0:21,0:21:57.02:0,57,762	0/0:18,0:16:44.44:0,44,536	0/0:23,0:23:69.19:0,69,897	0/0:12,0:12:36.10:0,36,469	1/1:0,5:5:14.96:184,15,0	1/1:0,11:11:30.10:400,30,0	1/1:0,6:6:12.04:167,12,0	0/1:15,0:15:22.76:42,0,23	0/0:18,0:18:54.15:0,54,729	0/0:23,0:23:69.23:0,69,956	0/0:8,0:8:24.08:0,24,334
chr10	72256110	.	TG	T	3615.91	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=11.308;DP=522;FS=2.548;HRun=2;HaplotypeScore=55.5732;InbreedingCoeff=0.9996;MQ=55.15;MQ0=9;MQRankSum=1.280;QD=33.48;ReadPosRankSum=3.198;VQSLOD=3.7504;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,114,1708	0/0:12,0:11:33.11:0,33,491	./.	./.	0/0:22,0:22:57.18:0,57,836	0/0:19,0:19:54.18:0,54,809	0/0:15,0:14:39.08:0,39,540	0/0:22,0:21:60.20:0,60,889	0/0:18,0:18:54.16:0,54,771	1/1:2,13:14:39.13:504,39,0	1/1:1,21:21:54.18:700,54,0	0/0:19,0:19:57.19:0,57,850	0/0:10,0:10:30.10:0,30,450	0/0:13,0:13:39.13:0,39,584	0/0:13,0:13:36.12:0,36,539	0/0:15,0:15:42.13:0,42,608	1/1:2,25:26:75.24:972,75,0	1/1:1,24:24:63.17:817,63,0	0/0:22,0:20:57.18:0,57,825	0/0:22,0:21:54.18:0,54,807	0/0:33,0:32:93.32:0,93,1393	0/0:10,0:10:30.10:0,30,449	0/0:16,0:15:42.14:0,42,629	0/0:17,0:17:48.16:0,48,718	1/1:1,18:19:48.16:623,48,0	0/0:19,0:18:54.18:0,54,809	0/0:30,0:30:81.27:0,81,1212	0/0:19,0:19:57.19:0,57,854
chr10	72256190	.	CT	C	2203.32	PASS	AB=0.889;AC=11;AF=0.196;AN=56;BaseQRankSum=10.870;DP=525;FS=11.086;HRun=6;HaplotypeScore=48.8209;InbreedingCoeff=0.8855;MQ=65.46;MQ0=3;MQRankSum=0.653;QD=21.39;ReadPosRankSum=2.142;VQSLOD=2.0506;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.22:0,81,1041	0/0:10,0:10:27.09:0,27,355	0/0:12,0:9:27.09:0,27,351	0/0:18,1:16:39.12:0,39,497	0/0:23,0:23:63.20:0,63,827	0/0:16,0:16:42.14:0,42,552	0/0:18,0:18:54.16:0,54,696	0/0:31,0:31:69.21:0,69,891	0/0:21,0:21:57.19:0,57,750	1/1:2,11:13:33.08:355,33,0	1/1:4,17:20:57.14:612,57,0	0/0:23,0:23:61.75:0,62,793	0/0:16,0:16:48.14:0,48,612	0/0:18,0:18:54.15:0,54,681	0/0:18,0:18:45.15:0,45,591	0/0:17,0:17:45.15:0,45,592	1/1:4,17:21:63.16:676,63,0	1/1:0,12:12:33.08:355,33,0	0/0:26,0:25:63.20:0,63,828	0/0:17,0:17:45.15:0,45,591	0/0:28,0:28:81.25:0,81,1050	0/0:16,0:16:45.15:0,45,591	0/0:13,0:13:39.12:0,39,499	0/0:14,0:14:33.11:0,33,433	1/1:1,11:12:33.08:355,33,0	0/1:21,3:24:30.55:31,0,683	0/0:27,0:27:69.22:0,69,907	0/0:7,0:7:21.07:0,21,276
chr10	72256438	.	T	TG	3831.17	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-11.223;DP=631;FS=1.351;HRun=2;HaplotypeScore=61.8320;InbreedingCoeff=0.9520;MQ=87.90;MQ0=0;MQRankSum=-2.182;QD=36.49;ReadPosRankSum=0.813;VQSLOD=4.1858;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,117,1450	0/0:14,0:14:42.13:0,42,520	0/0:18,0:18:54.15:0,54,638	0/0:26,0:26:42.77:0,43,651	0/0:24,0:24:60.17:0,60,730	0/0:21,0:21:63.19:0,63,770	0/0:14,0:14:36.11:0,36,446	0/0:29,0:29:87.27:0,87,1068	0/0:22,0:22:66.21:0,66,816	1/1:3,19:22:51.17:733,51,0	1/1:0,19:19:54.18:777,54,0	0/0:19,0:19:51.15:0,51,619	0/0:27,0:27:81.22:0,81,977	0/0:22,0:22:60.16:0,60,718	0/0:19,0:19:57.18:0,57,707	0/0:31,0:31:90.26:0,90,1090	1/1:3,32:35:90.30:1294,90,0	1/1:0,12:12:27.09:389,27,0	0/0:20,0:20:60.16:0,60,728	0/0:23,0:23:66.21:0,66,818	0/0:37,0:37:99:0,108,1333	0/0:14,0:14:42.11:0,42,500	0/0:17,0:17:48.13:0,48,582	0/0:17,0:17:51.16:0,51,632	1/1:0,17:17:45.15:637,45,0	0/0:29,2:31:3.84:0,4,928	0/0:30,0:30:90.27:0,90,1102	0/0:5,0:5:9.01:0,9,97
chr10	72257762	.	T	TACAC	20687.70	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-15.752;DP=699;FS=1.636;HRun=0;HaplotypeScore=107.7480;InbreedingCoeff=0.9994;MQ=68.42;MQ0=1;MQRankSum=-6.738;QD=70.37;ReadPosRankSum=3.874;VQSLOD=7.1315;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,36:41:99:2702,99,0	0/0:7,0:7:21.07:0,21,400	0/0:22,0:21:60.19:0,60,1073	0/0:21,0:21:57.20:0,57,1067	0/0:25,0:25:69.24:0,69,1321	0/0:23,0:23:66.14:0,66,1230	0/0:23,0:23:66.23:0,66,1279	0/0:37,0:37:96.29:0,96,1735	0/0:26,0:26:78.27:0,78,1497	1/1:2,23:27:78.21:2011,78,0	1/1:1,18:21:54.19:1476,54,0	1/1:4,25:30:81.28:2212,81,0	1/1:3,30:35:84.25:2233,84,0	0/0:17,0:17:45.15:0,45,861	0/0:28,0:28:84.29:0,84,1628	0/0:19,0:19:57.17:0,57,1063	1/1:1,16:17:42.14:1148,42,0	1/1:1,13:15:39.13:1054,39,0	0/0:20,0:20:36.20:0,36,1025	0/0:36,0:36:99:0,102,1943	0/0:16,0:15:48.13:0,48,851	1/1:5,33:37:99:2774,102,0	1/1:2,28:30:81.17:2212,81,0	1/1:1,16:17:45.15:1231,45,0	1/1:2,20:23:60.21:1634,60,0	0/0:34,0:34:99:0,99,1879	0/0:33,0:33:93.30:0,93,1757	0/0:18,0:18:48.13:0,48,861
chr10	72257973	.	AGATG	A	2052.73	PASS	AB=0.964;AC=11;AF=0.212;AN=52;BaseQRankSum=8.059;DP=721;FS=4.616;HRun=0;HaplotypeScore=126.1747;InbreedingCoeff=0.8283;MQ=60.55;MQ0=6;MQRankSum=1.401;QD=13.59;ReadPosRankSum=0.719;VQSLOD=3.3555;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:42.14:0,42,963	0/0:7,0:7:3.01:0,3,70	./.	./.	0/0:18,0:18:24.08:0,24,560	0/1:26,1:26:15.94:16,0,561	0/0:27,0:27:33.08:0,33,660	0/0:32,0:31:9.03:0,9,118	0/0:22,0:22:39.12:0,39,864	0/0:13,0:20:33.10:0,33,545	0/0:17,0:24:20.64:0,21,371	1/1:17,15:32:39.13:598,39,0	1/1:19,7:26:18.06:276,18,0	0/0:19,0:19:21.07:0,21,490	0/0:47,0:47:69.24:0,69,1546	0/0:33,0:33:48.15:0,48,1024	0/0:19,0:20:21.02:0,21,300	0/0:19,0:19:24.04:0,24,477	0/0:22,0:22:12.04:0,12,252	0/0:23,0:22:39.12:0,39,817	0/0:59,0:59:78.25:0,78,1695	1/1:14,12:26:33.11:506,33,0	1/1:9,8:17:24.08:368,24,0	1/1:13,10:23:30.10:460,30,0	0/0:11,0:20:24.04:0,24,384	0/0:25,0:24:39.13:0,39,833	0/0:37,0:37:51.18:0,51,1148	0/0:11,0:11:33.11:0,33,758
chr10	72258698	.	A	AGT	1631.51	PASS	AB=0.859;AC=18;AF=0.360;AN=50;BaseQRankSum=-0.733;DP=574;FS=7.203;HRun=0;HaplotypeScore=92.9960;InbreedingCoeff=0.6172;MQ=58.88;MQ0=5;MQRankSum=-1.176;QD=6.94;ReadPosRankSum=-1.669;VQSLOD=2.2826;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:22:4.15:39,4,0	0/0:13,0:13:18.05:0,18,200	./.	./.	0/0:21,0:20:24.06:0,24,266	0/0:27,0:28:53.98:0,54,580	0/1:19,0:19:15.18:15,0,268	0/0:39,0:38:29.45:0,29,255	0/0:17,0:17:33.09:0,33,362	0/1:14,5:21:3.63:178,0,4	0/1:7,6:13:8.28:240,0,8	1/1:13,1:22:5.99:49,6,0	1/1:19,0:18:15.79:116,16,0	0/0:15,0:16:23.89:0,24,236	0/0:31,0:30:44.54:0,45,455	0/0:24,0:25:26.77:0,27,280	1/1:8,18:27:20.12:697,20,0	1/1:16,0:16:8.23:57,8,0	0/0:21,0:19:9.02:0,9,100	0/0:23,0:22:26.86:0,27,279	0/0:18,0:22:20.78:0,21,213	0/0:9,0:9:0:0,0,0	./.	1/1:30,0:28:8.52:94,9,0	1/1:8,12:20:21.07:317,21,0	0/1:24,0:26:1.09:1,0,355	0/0:28,0:28:42.06:0,42,447	0/0:6,0:6:9.89:0,10,59
chr10	72265575	.	A	ACTG	6202.85	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-9.605;DP=687;FS=5.800;HRun=0;HaplotypeScore=106.5226;InbreedingCoeff=0.9973;MQ=77.40;MQ0=0;MQRankSum=-3.632;QD=49.23;ReadPosRankSum=1.490;VQSLOD=7.2426;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,138,2217	0/0:8,0:8:21.07:0,21,337	0/0:14,0:14:28.43:0,28,432	0/0:22,0:22:51.05:0,51,762	0/0:24,0:23:57.18:0,57,870	0/0:11,0:11:33.10:0,33,507	0/0:26,0:26:75.24:0,75,1181	0/0:32,0:32:87.30:0,87,1394	0/0:32,0:32:93.26:0,93,1442	0/0:10,0:10:24.08:0,24,385	0/0:24,0:23:60.20:0,60,953	1/1:1,29:33:84.76:1843,85,0	1/1:3,21:24:66.23:1446,66,0	0/0:32,0:32:90.29:0,90,1418	0/0:31,0:31:84.29:0,84,1350	0/0:27,0:27:72.25:0,72,1154	0/0:18,0:18:45.15:0,45,723	0/0:16,0:16:45.15:0,45,723	0/0:23,0:23:60.19:0,60,937	0/0:12,0:12:33.10:0,33,503	0/0:50,0:50:99:0,141,2242	1/1:3,21:25:57.20:1213,57,0	1/1:1,10:13:21.05:441,21,0	1/1:3,28:31:57.66:1260,58,0	0/0:22,0:22:63.21:0,63,1012	0/0:30,0:29:75.26:0,75,1205	0/0:29,0:29:81.25:0,81,1259	0/0:17,0:17:45.15:0,45,723
chr10	72266800	.	CGTGTGTGTGTGTGTGT	C	1919.43	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.719;DP=490;FS=16.893;HRun=0;HaplotypeScore=187.1733;InbreedingCoeff=0.8149;MQ=68.73;MQ0=11;MQRankSum=-5.017;QD=30.47;ReadPosRankSum=-1.451;VQSLOD=1.1493;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:25:30.06:0,30,1605	0/0:4,0:4:9.03:0,9,423	0/0:28,0:16:9.03:0,9,304	0/0:34,0:24:12.03:0,12,299	0/0:26,0:26:27.08:0,27,1615	0/0:19,0:20:39.13:0,39,2337	0/0:17,0:16:21.51:0,22,1162	0/0:15,0:12:10.83:0,11,340	0/0:3,0:7:9.50:0,10,627	1/1:17,5:23:14.53:619,15,0	1/1:4,10:15:18.06:674,18,0	0/0:16,0:16:11.32:0,11,727	0/0:8,0:6:6.02:0,6,269	0/0:17,0:17:33.11:0,33,2312	0/0:21,0:21:42.14:0,42,2658	0/0:15,0:15:33.09:0,33,1993	1/1:6,8:14:9.03:397,9,0	0/0:13,0:19:27.09:0,27,1331	0/0:15,0:14:15.05:0,15,1002	0/0:15,0:15:21.07:0,21,1303	0/0:26,0:26:33.09:0,33,1754	0/0:14,0:13:6:0,6,399	0/0:14,0:14:9.86:0,10,721	0/0:25,0:25:15.05:0,15,575	1/1:5,6:11:9.03:377,9,0	0/0:19,0:19:51.17:0,51,3026	0/0:12,0:12:32.60:0,33,1909	0/0:13,0:12:27.09:0,27,1713
chr10	72268198	.	A	AAAAC	6638.45	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.448;DP=696;FS=1.379;HRun=0;HaplotypeScore=130.6858;InbreedingCoeff=0.9951;MQ=70.88;MQ0=3;MQRankSum=0.721;QD=34.94;ReadPosRankSum=-0.931;VQSLOD=4.4505;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,37:51:61.37:1877,61,0	0/0:13,0:13:33.11:0,33,530	0/0:31,0:22:17.96:0,18,184	0/0:34,0:30:19.50:0,19,399	0/0:17,0:17:20.50:0,21,397	0/0:17,0:17:33.10:0,33,504	0/0:25,0:25:39.11:0,39,582	0/0:26,0:26:33.11:0,33,530	0/0:23,0:23:60.17:0,60,899	0/0:4,0:23:38.35:0,38,363	0/0:3,0:26:50.43:0,50,455	1/1:7,14:22:36.12:869,36,0	1/1:14,18:33:42.14:1013,42,0	0/0:18,0:18:51.16:0,51,801	0/0:23,0:23:54.18:0,54,848	0/0:18,0:18:39.12:0,39,607	0/0:4,0:24:39:0,39,355	0/0:7,0:26:23.89:0,24,394	0/0:21,0:21:30.07:0,30,419	0/0:23,0:23:51.11:0,51,751	0/0:22,0:22:51.17:0,51,816	1/1:9,17:26:46.23:893,46,0	1/1:5,14:19:30.10:724,30,0	1/1:10,27:37:56.51:1261,57,0	0/0:2,0:15:27.03:0,27,252	0/0:30,0:31:66.21:0,66,1019	0/0:26,0:25:60.15:0,60,914	0/0:23,0:23:51.17:0,51,797
chr10	72269399	.	TGTGTGTGTGTGTGTGTGTGTGTGCGCGCGC	T	230.41	PASS	AB=0.855;AC=2;AF=0.036;AN=56;BaseQRankSum=0.985;DP=434;FS=19.526;HRun=0;HaplotypeScore=238.5086;InbreedingCoeff=-0.0768;MQ=42.97;MQ0=29;MQRankSum=-3.897;QD=3.78;ReadPosRankSum=-3.397;VQSLOD=0.8308;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,16:38:60.06:294,0,60	0/0:1,0:1:3.01:0,3,281	0/0:10,0:5:8.99:0,9,306	0/0:13,0:2:3.01:0,3,85	0/0:22,0:22:45.15:0,45,3031	0/0:14,0:14:29.45:0,29,2252	0/0:14,0:13:25.02:0,25,1398	0/0:14,0:14:39.61:0,40,2025	0/0:5,0:3:6.02:0,6,723	0/0:23,0:22:63.20:0,63,3689	0/0:12,0:12:23.62:0,24,1135	0/0:17,0:13:25.46:0,25,1059	0/0:16,0:16:20.50:0,20,1144	0/0:8,0:8:12.04:0,12,1440	0/0:6,0:3:3.01:0,3,275	0/0:3,0:3:3.01:0,3,100	0/1:22,0:21:23.56:24,0,2280	0/0:19,0:18:41.89:0,42,2157	0/0:9,0:9:24.08:0,24,1231	0/0:12,0:10:15.05:0,15,1082	0/0:26,0:22:42.13:0,42,2416	0/0:23,0:23:36.12:0,36,2312	0/0:9,0:9:15.05:0,15,769	0/0:28,0:26:9.63:0,10,693	0/0:23,0:23:34.37:0,34,2592	0/0:24,0:20:60.20:0,60,4363	0/0:16,0:16:35.28:0,35,2773	0/0:6,0:4:9.03:0,9,716
chr10	72269421	.	TGCGCGCGCGCGCGCGCGCGCGC	T	656.82	PASS	AB=0.809;AC=9;AF=0.173;AN=52;BaseQRankSum=5.310;DP=341;FS=4.644;HRun=0;HaplotypeScore=150.4214;InbreedingCoeff=0.2974;MQ=42.93;MQ0=24;MQRankSum=-4.501;QD=6.99;ReadPosRankSum=0.833;VQSLOD=2.6899;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:2.99:27,3,0	0/0:2,0:2:3.01:0,3,246	./.	0/1:1,0:1:0:0,0,0	0/0:16,0:16:27.08:0,27,1131	0/0:9,0:9:18.06:0,18,1708	0/0:15,0:14:30.47:0,30,2120	0/1:10,0:11:45.03:45,0,215	0/0:4,0:3:6.02:0,6,428	0/0:17,0:16:39.13:0,39,1087	0/0:10,0:10:8.64:0,9,408	0/1:10,1:10:0.61:402,0,1	0/1:5,7:15:30.97:70,0,31	0/0:9,0:9:15.05:0,15,1211	0/0:4,0:1:3:0,3,25	./.	0/0:23,0:22:16.30:0,16,671	0/0:15,0:14:19.31:0,19,706	0/0:11,0:11:30.10:0,30,1869	0/0:10,0:10:12.04:0,12,827	0/0:19,0:17:34:0,34,2373	0/0:10,4:16:5.51:0,6,37	1/1:2,1:5:5.85:127,6,0	0/1:16,6:23:54.57:113,0,55	0/0:20,0:20:16.71:0,17,570	0/0:21,0:17:16.14:0,16,1837	0/0:12,0:12:22.81:0,23,1244	0/0:8,0:7:18.06:0,18,644
chr10	72269439	.	CGCGCGCGCGT	C	991.21	PASS	AB=0.990;AC=20;AF=0.370;AN=54;BaseQRankSum=8.082;DP=336;FS=0.741;HRun=0;HaplotypeScore=97.7138;InbreedingCoeff=0.3491;MQ=59.36;MQ0=11;MQRankSum=-1.839;QD=6.35;ReadPosRankSum=1.697;VQSLOD=1.5140;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:15.97:0,16,187	0/0:6,0:6:15.02:0,15,283	0/0:3,0:3:6.02:0,6,69	0/1:7,0:5:0.22:9,0,0	0/0:13,0:13:27.07:0,27,499	0/0:13,0:13:36.08:0,36,1175	0/0:26,0:25:60.06:0,60,1381	0/1:12,0:12:32.49:32,0,153	0/0:4,0:3:5.99:0,6,106	1/1:4,12:15:24.32:331,24,0	1/1:2,13:15:5.55:26,6,0	0/1:7,0:5:12.95:142,0,13	1/1:11,0:11:3.01:50,3,0	0/0:12,0:12:27.03:0,27,600	0/0:2,0:1:2.94:0,3,18	0/0:3,0:3:5.97:0,6,46	1/1:1,22:22:6.68:242,7,0	0/1:14,0:13:11.05:15,0,11	0/0:15,0:15:41.83:0,42,912	0/0:11,0:10:24.02:0,24,494	0/0:25,0:25:65.77:0,66,1578	./.	1/1:3,0:3:3.48:55,3,0	1/1:8,0:8:3.48:54,3,0	1/1:3,12:15:0.76:94,1,0	0/1:15,1:15:62.60:63,0,554	0/0:10,0:10:23.18:0,23,478	0/1:9,0:8:45.79:46,0,248
chr10	72270288	.	CT	C	1006.27	PASS	AB=0.889;AC=14;AF=0.250;AN=56;BaseQRankSum=1.912;DP=572;FS=2.037;HRun=14;HaplotypeScore=100.1504;InbreedingCoeff=0.3931;MQ=69.65;MQ0=3;MQRankSum=2.901;QD=4.14;ReadPosRankSum=0.986;VQSLOD=1.9306;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:14:13.60:0,14,56	0/0:15,0:15:12.14:0,12,236	0/1:31,1:16:4.54:5,0,46	0/1:30,0:24:15.33:15,0,46	0/0:22,1:24:10.02:0,10,393	0/0:21,0:22:53.89:0,54,484	0/0:16,0:17:41.84:0,42,367	0/0:22,0:25:41.83:0,42,363	0/1:17,2:21:17.68:18,0,287	1/1:4,11:15:7.85:198,8,0	1/1:7,15:22:18.40:278,18,0	0/0:23,0:23:17.24:0,17,98	0/0:19,0:19:37.46:0,37,215	0/0:13,0:16:14.12:0,14,248	0/1:16,4:20:31.27:31,0,310	0/0:13,1:15:15.29:0,15,273	1/1:8,17:27:26.10:277,26,0	0/1:18,4:22:35.14:35,0,265	0/0:13,1:18:19.15:0,19,291	0/1:20,6:26:54.45:54,0,364	0/0:6,0:6:10.57:0,11,87	0/0:22,0:22:24.32:0,24,138	0/0:24,0:24:33.86:0,34,201	0/0:16,0:16:8.30:0,8,40	1/1:9,14:26:20.73:269,21,0	0/0:13,0:14:29.87:0,30,265	0/0:23,0:24:47.80:0,48,402	0/0:13,1:15:15.28:0,15,267
chr10	72270290	.	T	TC	841	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=5.965;DP=587;FS=19.042;HRun=0;HaplotypeScore=108.7239;InbreedingCoeff=0.6494;MQ=69.17;MQ0=4;MQRankSum=-8.422;QD=5.46;ReadPosRankSum=1.068;VQSLOD=2.1719;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,4:14:35.53:289,36,0	0/0:14,0:14:40.35:0,40,488	0/1:34,0:17:3.50:3,0,60	0/0:34,0:25:15.47:0,15,114	0/0:25,0:25:69.04:0,69,808	0/0:22,0:22:66.07:0,66,798	0/0:17,0:17:48.60:0,49,603	0/0:27,0:27:71.71:0,72,739	0/0:21,0:21:60.41:0,60,655	0/0:15,0:15:41.45:0,41,350	0/0:23,0:23:63.13:0,63,531	1/1:23,0:23:34.12:274,34,0	0/1:19,0:19:18.01:82,0,18	0/0:16,0:16:39.89:0,40,464	0/0:19,0:19:57.04:0,57,668	0/0:16,0:16:42.98:0,43,518	0/0:27,0:27:46.68:0,47,509	0/0:24,0:24:65.56:0,66,703	0/0:18,0:18:46.45:0,46,523	0/0:25,0:25:73.34:0,73,715	0/0:6,0:6:13.85:0,14,153	1/1:22,0:22:21.32:193,21,0	0/1:25,0:25:1.63:136,0,2	0/1:17,0:17:2.74:23,0,3	0/0:30,0:30:66.54:0,67,534	0/0:14,0:14:39.98:0,40,475	0/0:24,0:24:63.06:0,63,679	0/0:15,0:15:35.50:0,35,461
chr10	72270302	.	TGAC	T	163.88	PASS	AB=0.833;AC=2;AF=0.036;AN=56;BaseQRankSum=4.836;DP=533;FS=5.083;HRun=0;HaplotypeScore=108.6572;InbreedingCoeff=-0.0399;MQ=70.74;MQ0=6;MQRankSum=-1.653;QD=3.49;ReadPosRankSum=-0.202;VQSLOD=1.8001;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,5:13:99:223,0,352	0/0:12,0:13:39.13:0,39,767	0/0:38,0:18:9.73:0,10,369	0/1:32,0:22:29.71:30,0,297	0/0:26,0:26:78.18:0,78,1544	0/0:21,0:21:63.21:0,63,1293	0/0:18,0:18:54.19:0,54,1130	0/0:22,0:23:65.03:0,65,1324	0/0:17,0:18:54.12:0,54,944	0/0:18,0:18:54.18:0,54,994	0/0:19,0:19:57.19:0,57,992	0/0:7,0:7:21.07:0,21,370	0/0:15,0:15:45.12:0,45,704	0/0:14,0:14:39.02:0,39,741	0/0:18,0:19:54.18:0,54,1074	0/0:15,0:15:45.15:0,45,878	0/0:23,0:24:58.71:0,59,879	0/0:20,0:20:57.19:0,57,1117	0/0:17,0:17:48.16:0,48,946	0/0:29,0:29:72.05:0,72,1420	0/0:6,0:6:18.06:0,18,338	0/0:12,0:12:36.12:0,36,708	0/0:17,0:17:51.17:0,51,1001	0/0:6,0:6:15.05:0,15,235	0/0:31,0:31:84.28:0,84,1566	0/0:21,0:21:60.21:0,60,1255	0/0:25,0:25:66.22:0,66,1273	0/0:14,0:14:42.14:0,42,868
chr10	72270318	.	TA	T	1605.77	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.385;DP=542;FS=9.993;HRun=8;HaplotypeScore=80.0768;InbreedingCoeff=0.9882;MQ=69.29;MQ0=5;MQRankSum=-6.322;QD=20.59;ReadPosRankSum=1.531;VQSLOD=3.4793;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,10:12:27.04:260,27,0	0/0:13,0:13:36.11:0,36,434	0/0:31,0:16:23.21:0,23,216	0/0:24,0:19:20.80:0,21,155	0/0:34,0:34:93.27:0,93,1101	0/0:22,0:22:66.20:0,66,797	0/0:17,0:17:48.15:0,48,580	0/0:22,0:22:60.15:0,60,687	0/0:19,0:19:42.10:0,42,474	0/0:22,0:22:54.14:0,54,629	0/0:20,0:20:48.15:0,48,580	1/1:2,7:9:15.02:145,15,0	1/1:3,10:13:30.05:288,30,0	0/0:10,0:10:30.06:0,30,331	0/0:19,0:19:51.12:0,51,583	0/0:15,0:15:36.08:0,36,402	0/0:24,0:24:60.10:0,60,672	0/0:22,0:22:57.16:0,57,675	0/0:19,0:19:54.13:0,54,607	0/0:24,0:24:60.17:0,60,714	0/0:5,0:5:12.04:0,12,145	1/1:1,12:13:36.06:347,36,0	1/1:2,20:22:54.08:521,54,0	1/1:0,9:9:24.04:232,24,0	0/0:37,0:37:99:0,99,1178	0/0:24,0:24:66.17:0,66,764	0/0:25,0:25:57.11:0,57,649	0/0:15,0:15:45.14:0,45,543
chr10	72270554	.	TGCAGAAGGTAGAG	T	5852.77	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.415;DP=680;FS=17.330;HRun=0;HaplotypeScore=248.9319;InbreedingCoeff=0.9618;MQ=69.53;MQ0=0;MQRankSum=-11.373;QD=68.06;ReadPosRankSum=2.570;VQSLOD=3.0821;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,8444	0/0:6,0:6:18.06:0,18,1138	0/0:24,0:24:69.24:0,69,3346	0/0:24,0:24:69.19:0,69,3390	0/0:15,0:15:42.14:0,42,2317	0/0:22,0:22:63.21:0,63,3829	0/0:23,0:23:63.22:0,63,3586	0/0:28,0:28:75.26:0,75,4409	0/0:38,0:38:99:0,108,6368	0/0:19,0:19:45.15:0,45,2478	0/0:18,0:18:45.15:0,45,2933	1/1:1,14:15:36.12:1416,36,0	1/1:1,15:16:36.12:1416,36,0	0/0:28,0:28:75.26:0,75,4753	0/0:44,0:44:99:0,126,7773	0/0:27,0:27:72.25:0,72,4364	0/0:44,0:44:99:0,126,7250	0/0:23,0:23:67.47:0,67,3909	0/0:21,0:21:60.21:0,60,3123	0/0:22,0:22:57.20:0,57,3528	0/0:47,0:47:99:0,138,8541	1/1:3,16:19:39.13:1489,39,0	1/1:1,6:7:12.04:472,12,0	1/1:10,19:29:26.91:1061,27,0	0/0:19,0:17:54.18:0,54,3102	0/0:25,0:25:72.25:0,72,4263	0/0:20,0:19:60.21:0,60,3806	0/0:10,0:9:4.97:0,5,1427
chr10	72270930	.	A	AGCGAGCGC	2108.31	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=10.549;DP=744;FS=41.306;HRun=0;HaplotypeScore=235.4685;InbreedingCoeff=0.0752;MQ=68.17;MQ0=20;MQRankSum=-9.883;QD=8.33;ReadPosRankSum=-1.152;VQSLOD=1.2173;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,15:41:7.52:142,8,0	0/0:10,0:10:30.10:0,30,753	0/0:59,0:23:47.29:0,47,697	0/0:63,0:24:56.76:0,57,939	0/0:21,0:21:63.18:0,63,1432	0/0:24,0:24:66.21:0,66,1680	0/0:23,0:23:60.18:0,60,1443	0/0:38,0:36:99:0,102,2528	0/0:21,0:21:54.18:0,54,1446	0/1:19,0:19:99:243,0,672	0/1:27,0:27:29.13:29,0,862	0/1:16,0:16:99:168,0,182	1/1:15,0:29:36.18:749,36,0	0/0:22,0:22:53.91:0,54,1442	0/0:26,0:26:69.18:0,69,1627	0/0:20,0:20:57.20:0,57,1554	0/1:19,0:19:99:344,0,342	0/1:11,0:11:99:164,0,296	0/0:29,0:29:78.18:0,78,1699	0/0:20,0:20:51.16:0,51,1228	0/0:30,0:29:81.28:0,81,2145	0/1:19,0:19:99:222,0,167	0/1:21,0:21:65.41:65,0,86	0/1:21,0:21:34.12:76,0,34	0/1:29,0:28:70.01:70,0,792	0/0:29,0:29:19.12:0,19,1827	0/0:39,0:39:99:0,108,2796	0/0:17,0:15:36.12:0,36,841
chr10	72274528	.	G	GGAGGAGGAA	6081.76	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.231;DP=511;FS=27.953;HRun=0;HaplotypeScore=141.8076;InbreedingCoeff=0.9618;MQ=62.75;MQ0=9;MQRankSum=-9.092;QD=53.82;ReadPosRankSum=-2.423;VQSLOD=2.7892;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,3:31:38.15:1084,38,0	0/0:6,0:6:15.04:0,15,326	0/0:37,0:21:28.35:0,28,678	0/0:27,0:15:13.86:0,14,245	0/0:15,0:15:36.12:0,36,994	0/0:8,0:8:15.05:0,15,421	0/0:20,0:19:46.71:0,47,1226	0/0:13,0:13:13.28:0,13,321	0/0:16,0:16:30.10:0,30,828	0/0:15,0:14:21.07:0,21,541	0/0:18,0:18:32.93:0,33,797	1/1:5,10:15:15.05:694,15,0	1/1:2,9:12:18.06:771,18,0	0/0:17,0:17:36.11:0,36,959	0/0:23,0:23:54.19:0,54,1483	0/0:10,0:10:27.09:0,27,749	0/0:37,0:38:17.76:0,18,2249	0/0:14,0:14:30.01:0,30,704	0/0:7,0:5:15.02:0,15,242	0/0:21,0:21:42.14:0,42,1176	0/0:28,0:28:60.17:0,60,1531	1/1:8,5:14:36.02:1059,36,0	1/1:10,6:15:26.96:847,27,0	1/1:18,7:24:50.53:1627,51,0	0/0:22,0:22:42.14:0,42,1055	0/0:18,0:18:45.62:0,46,1195	0/0:20,0:20:54.18:0,54,1467	0/0:3,0:3:9.03:0,9,219
chr10	72274587	.	AAG	A	114.27	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.978;DP=450;FS=12.515;HRun=0;HaplotypeScore=86.3832;InbreedingCoeff=0.7313;MQ=53.55;MQ0=11;MQRankSum=-3.954;QD=10.39;ReadPosRankSum=0.585;VQSLOD=2.5953;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,5:10:15.05:203,15,0	0/0:5,0:5:15.04:0,15,230	0/0:27,0:8:9.01:0,9,113	0/0:34,0:9:7.46:0,7,112	0/0:18,0:18:48.16:0,48,811	0/0:11,0:11:30.08:0,30,493	0/0:18,0:17:36:0,36,582	0/0:20,0:19:54.18:0,54,881	0/0:16,0:16:28.99:0,29,594	0/0:23,0:23:60.14:0,60,976	0/0:16,0:16:45.15:0,45,771	0/0:13,0:11:24.08:0,24,369	0/0:13,0:13:33.11:0,33,490	0/0:17,0:17:51.17:0,51,896	0/0:18,0:17:51.15:0,51,821	0/0:11,0:11:33.11:0,33,575	0/0:32,0:32:72.43:0,72,1147	0/0:14,0:13:36.12:0,36,637	0/0:13,0:11:28.33:0,28,439	0/0:15,0:15:42.14:0,42,728	0/0:15,0:14:40.66:0,41,629	0/0:6,0:6:4.95:0,5,156	0/0:8,0:7:15.05:0,15,249	0/0:7,0:7:11.91:0,12,177	0/0:16,0:16:36.12:0,36,631	0/0:16,0:16:45.14:0,45,769	0/0:26,0:26:69.20:0,69,1127	0/0:11,0:11:30.10:0,30,500
chr10	72274611	.	GAA	G	1150.96	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=7.370;DP=405;FS=25.208;HRun=3;HaplotypeScore=71.8698;InbreedingCoeff=0.8642;MQ=48.85;MQ0=27;MQRankSum=-6.805;QD=26.16;ReadPosRankSum=-1.813;VQSLOD=0.9165;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,4:7:6.02:88,6,0	0/0:8,0:8:24.04:0,24,354	./.	0/0:14,0:2:2.58:0,3,48	0/0:15,0:14:36.12:0,36,667	0/0:19,0:15:42.12:0,42,700	0/0:17,0:15:29.96:0,30,483	0/0:18,0:14:42.10:0,42,643	0/0:16,0:16:38:0,38,785	0/0:21,0:19:27.42:0,27,520	0/0:14,0:14:35.91:0,36,391	1/1:1,10:9:27.09:408,27,0	1/1:1,10:11:30.10:452,30,0	0/0:16,0:16:48.10:0,48,857	0/0:18,0:17:51.16:0,51,869	0/0:17,0:17:51.13:0,51,788	0/0:28,0:28:63.90:0,64,723	0/0:17,0:15:3.64:0,4,372	0/0:9,0:7:15.34:0,15,147	0/0:16,0:16:45.06:0,45,760	0/0:13,0:12:31.58:0,32,438	1/1:1,3:4:11.40:144,11,0	1/1:2,4:5:9.03:136,9,0	1/1:0,4:4:6.02:91,6,0	0/0:21,0:17:47.98:0,48,576	0/0:16,0:16:45.12:0,45,712	0/0:25,0:25:66.93:0,67,1124	0/0:12,0:12:33.11:0,33,602
chr10	72274631	.	GGA	G	190.89	PASS	AC=8;AF=0.167;AN=48;BaseQRankSum=6.338;DP=388;FS=0.000;HRun=0;HaplotypeScore=74.1160;InbreedingCoeff=0.8579;MQ=50.62;MQ0=18;MQRankSum=-4.261;QD=19.09;ReadPosRankSum=1.360;VQSLOD=3.2923;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:7:21.07:0,21,403	./.	./.	0/0:18,0:17:45.15:0,45,824	0/0:22,0:19:54.16:0,54,985	0/0:18,0:16:27.11:0,27,451	0/0:18,0:15:45.11:0,45,680	0/0:20,0:20:42.83:0,43,1023	0/0:25,0:23:62.22:0,62,763	0/0:15,0:15:38.49:0,38,434	1/1:0,3:3:8.38:66,8,0	1/1:1,3:5:12.03:171,12,0	0/0:17,0:17:51.17:0,51,971	0/0:18,0:17:51.17:0,51,964	0/0:14,0:14:42.14:0,42,833	0/0:33,0:33:75.61:0,76,882	0/0:18,0:16:31.13:0,31,377	0/0:10,0:9:26.92:0,27,329	0/0:17,0:17:48.14:0,48,880	0/0:13,0:12:31.60:0,32,497	1/1:0,1:1:3.01:41,3,0	./.	1/1:0,1:1:3.01:42,3,0	0/0:22,0:18:50.77:0,51,567	0/0:16,0:16:48.12:0,48,810	0/0:28,0:28:75.22:0,75,1360	0/0:13,0:13:39.13:0,39,759
chr10	72274635	.	GGA	G	196.47	PASS	AC=8;AF=0.167;AN=48;BaseQRankSum=6.316;DP=383;FS=1.193;HRun=0;HaplotypeScore=79.3156;InbreedingCoeff=0.8583;MQ=50.83;MQ0=15;MQRankSum=-3.669;QD=21.83;ReadPosRankSum=1.425;VQSLOD=3.6016;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:7:21.07:0,21,403	./.	./.	0/0:18,0:18:48.16:0,48,870	0/0:22,0:19:54.16:0,54,988	0/0:18,0:16:28.82:0,29,483	0/0:18,0:15:45.11:0,45,671	0/0:21,0:21:40.84:0,41,1062	0/0:22,0:21:56.11:0,56,582	0/0:16,0:16:38.44:0,38,371	1/1:0,3:3:8.45:71,8,0	1/1:1,3:4:12.04:171,12,0	0/0:18,0:18:54.18:0,54,1012	0/0:16,0:15:45.14:0,45,857	0/0:14,0:14:42.14:0,42,832	0/0:33,1:34:78.48:0,78,771	0/0:17,0:15:28.12:0,28,331	0/0:10,0:10:29.89:0,30,358	0/0:18,0:18:51.13:0,51,865	0/0:13,0:12:30.53:0,31,509	1/1:0,1:1:3.01:42,3,0	./.	1/1:0,1:1:3.01:42,3,0	0/0:20,0:16:44.71:0,45,438	0/0:16,0:16:48.12:0,48,813	0/0:27,0:27:75.25:0,75,1390	0/0:15,0:15:45.10:0,45,786
chr10	72274639	.	GGA	G	263.42	PASS	AB=1.000;AC=11;AF=0.212;AN=52;BaseQRankSum=7.192;DP=396;FS=24.962;HRun=0;HaplotypeScore=82.8344;InbreedingCoeff=0.5039;MQ=51.29;MQ0=13;MQRankSum=-0.530;QD=4.05;ReadPosRankSum=2.028;VQSLOD=0.7213;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:3:2.90:0,3,16	0/0:7,0:7:21.07:0,21,403	./.	./.	0/0:20,0:20:54.18:0,54,955	0/0:24,0:21:60.18:0,60,1073	0/0:20,0:18:39.05:0,39,584	0/0:16,0:13:39.10:0,39,591	0/0:22,0:22:37.87:0,38,1096	0/1:22,0:21:0.54:1,0,265	0/1:15,0:15:31.68:32,0,125	1/1:0,3:3:8.49:73,8,0	1/1:1,3:4:12.03:151,12,0	0/0:19,0:19:57.12:0,57,980	0/0:15,0:14:42.14:0,42,832	0/0:14,0:14:42.14:0,42,811	0/0:36,0:36:48.45:0,48,424	0/1:17,0:15:60.92:61,0,100	0/0:11,0:11:32.69:0,33,318	0/0:21,0:21:57.79:0,58,898	0/0:14,0:13:4.23:0,4,443	1/1:0,1:1:3.01:43,3,0	0/0:3,0:3:0.68:0,1,2	1/1:2,1:3:3.01:43,3,0	0/0:22,0:18:26.11:0,26,295	0/0:16,0:16:43.67:0,44,656	0/0:29,0:29:81.19:0,81,1346	0/0:15,0:15:45.08:0,45,761
chr10	72274690	.	AG	A	1533.55	PASS	AB=0.929;AC=14;AF=0.250;AN=56;BaseQRankSum=8.876;DP=516;FS=3.998;HRun=2;HaplotypeScore=73.3597;InbreedingCoeff=0.7858;MQ=59.08;MQ0=10;MQRankSum=-5.290;QD=17.43;ReadPosRankSum=0.164;VQSLOD=3.6840;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:13:24.08:310,24,0	0/0:12,0:12:36.11:0,36,516	0/0:13,0:13:32.50:0,33,463	0/0:10,0:7:20.65:0,21,254	0/0:21,0:21:60.20:0,60,890	0/0:22,0:20:60.20:0,60,893	0/0:24,0:24:60.15:0,60,795	0/0:35,0:34:90.09:0,90,1261	0/0:16,0:16:45.15:0,45,669	0/0:27,0:26:78.23:0,78,1107	0/0:20,0:20:57.19:0,57,845	1/1:1,3:4:9.03:116,9,0	1/1:1,11:11:33.11:432,33,0	0/1:8,0:8:3.27:3,0,248	0/0:9,0:8:21.07:0,21,313	0/0:19,0:19:57.18:0,57,826	0/0:41,1:42:99:0,109,1556	0/0:18,0:16:47.83:0,48,650	0/0:16,0:15:24.01:0,24,557	0/1:20,4:24:14.42:14,0,698	0/0:13,1:13:36.09:0,36,496	1/1:1,8:9:26.30:317,26,0	1/1:1,9:10:3.67:289,4,0	1/1:0,7:7:18.06:232,18,0	0/0:34,0:30:39.34:0,39,1050	0/0:16,0:16:11.07:0,11,526	0/0:31,0:30:70.10:0,70,1184	0/0:29,0:28:36.52:0,37,1040
chr10	72274887	.	C	CTG	163.45	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=5.374;DP=528;FS=15.790;HRun=0;HaplotypeScore=70.4769;InbreedingCoeff=0.7944;MQ=66.63;MQ0=0;MQRankSum=-3.645;QD=12.57;ReadPosRankSum=0.847;VQSLOD=1.8258;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,4:5:12.03:150,12,0	0/0:8,0:8:24.08:0,24,391	0/0:21,0:19:54.12:0,54,807	0/0:23,0:21:60.20:0,60,956	0/0:17,0:17:48.16:0,48,783	0/0:26,0:26:78.25:0,78,1245	0/0:27,0:27:81.26:0,81,1292	0/0:39,0:39:99:0,108,1734	0/0:20,0:20:57.19:0,57,930	0/0:30,0:30:90.27:0,90,1436	0/0:18,0:18:51.17:0,51,829	./.	1/1:0,1:1:2.99:24,3,0	0/0:20,0:20:57.19:0,57,927	0/0:25,0:25:72.25:0,72,1175	0/0:19,0:19:54.17:0,54,850	0/0:25,0:25:72.25:0,72,1174	0/0:24,0:24:69.19:0,69,1086	0/0:14,1:15:4.10:0,4,620	0/0:14,0:14:42.14:0,42,685	0/0:42,0:42:99:0,123,1973	1/1:0,1:1:3:28,3,0	1/1:0,2:2:6.02:79,6,0	1/1:1,3:4:2.98:22,3,0	0/0:22,0:21:57.18:0,57,906	0/0:27,0:27:81.28:0,81,1309	0/0:26,0:26:78.27:0,78,1268	0/0:26,0:26:78.27:0,78,1269
chr10	72276684	.	T	TA	5055.75	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.216;DP=627;FS=1.235;HRun=1;HaplotypeScore=61.2158;InbreedingCoeff=1.0000;MQ=81.12;MQ0=0;MQRankSum=-0.497;QD=39.50;ReadPosRankSum=1.690;VQSLOD=5.5137;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:84.28:1259,84,0	0/0:18,0:18:51.17:0,51,662	0/0:21,0:20:48.41:0,48,629	0/0:20,0:19:49.49:0,49,593	0/0:23,0:23:63.20:0,63,818	0/0:22,0:22:66.20:0,66,841	0/0:16,0:16:48.16:0,48,623	0/0:26,0:26:75.20:0,75,932	0/0:26,0:26:75.24:0,75,974	0/0:26,0:26:75.23:0,75,960	0/0:14,0:14:39.13:0,39,506	1/1:0,19:19:57.19:854,57,0	1/1:1,19:20:48.16:719,48,0	0/0:17,0:17:51.17:0,51,662	0/0:20,0:20:60.19:0,60,778	0/0:21,0:21:60.20:0,60,779	0/0:38,0:38:99:0,114,1479	0/0:17,0:17:51.15:0,51,647	0/0:24,0:24:66.19:0,66,831	0/0:25,0:25:72.23:0,72,935	0/0:33,0:33:99:0,99,1270	1/1:0,19:19:57.15:829,57,0	1/1:0,21:21:50.88:764,51,0	1/1:2,17:19:42.14:630,42,0	0/0:22,0:22:66.21:0,66,857	0/0:19,0:19:57.19:0,57,739	0/0:33,0:32:93.30:0,93,1206	0/0:18,0:18:54.18:0,54,698
chr10	72277928	.	G	GCA	7307	PASS	AB=0.784;AC=11;AF=0.196;AN=56;BaseQRankSum=16.346;DP=1229;FS=2.777;HRun=0;HaplotypeScore=231.3093;InbreedingCoeff=0.8858;MQ=57.81;MQ0=9;MQRankSum=0.958;QD=25.20;ReadPosRankSum=0.996;VQSLOD=4.7847;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:55,21:75:99:428,0,1194	0/0:15,0:15:42.14:0,42,551	0/0:34,0:10:20.96:0,21,248	0/0:32,0:13:26.73:0,27,307	0/0:31,0:31:81.26:0,81,1064	0/0:27,0:27:75.24:0,75,986	0/0:36,0:36:90.29:0,90,1182	0/0:47,0:46:99:0,114,1486	0/0:53,0:53:99:0,135,1744	0/0:61,0:61:99:0,156,2039	0/0:26,0:26:72.23:0,72,946	1/1:7,58:65:99:2103,123,0	1/1:7,38:50:65.92:1706,66,0	0/0:67,0:67:99:0,187,2395	0/0:70,0:70:99:0,175,2272	0/0:58,0:58:99:0,157,2050	0/0:30,0:30:66.13:0,66,938	0/0:37,0:36:83.50:0,84,1087	0/0:21,0:21:48.16:0,48,627	0/0:36,0:36:99:0,105,1364	0/0:120,0:115:99:0,313,4082	1/1:2,35:37:54.14:926,54,0	1/1:2,17:18:36.12:617,36,0	1/1:9,33:38:90.05:1526,90,0	0/0:30,0:30:84.21:0,84,1042	0/0:59,0:59:99:0,160,2090	0/0:31,0:31:93.29:0,93,1206	0/0:18,0:18:54.18:0,54,710
chr10	72278056	.	G	GCA	4081.26	PASS	AB=0.753;AC=6;AF=0.107;AN=56;BaseQRankSum=3.803;DP=1324;FS=3.875;HRun=0;HaplotypeScore=225.9054;InbreedingCoeff=-0.1213;MQ=57.30;MQ0=5;MQRankSum=0.220;QD=14.02;ReadPosRankSum=-10.029;VQSLOD=0.9124;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:53,5:57:99:203,0,852	0/0:11,0:11:27.09:0,27,355	0/0:40,0:25:38.39:0,38,745	0/0:41,1:31:60.53:0,61,713	0/0:32,0:32:78.24:0,78,1011	0/0:32,0:32:81.25:0,81,1049	0/0:33,0:33:78.23:0,78,1008	0/0:60,0:60:99:0,150,1908	0/0:72,0:72:99:0,205,2659	0/0:91,0:89:99:0,250,3250	0/0:28,0:28:69.21:0,69,888	0/1:34,25:56:99:1003,0,299	0/1:45,24:68:99:1209,0,629	0/0:73,0:73:99:0,208,2720	0/0:66,0:66:99:0,175,2271	0/0:65,0:65:99:0,187,2429	0/0:16,1:17:12.43:0,12,465	0/0:31,2:33:26.61:0,27,864	0/0:21,0:21:45.15:0,45,590	0/0:31,0:31:93.29:0,93,1205	0/0:106,0:104:99:0,245,3353	0/1:26,9:34:99:550,0,150	0/1:14,14:21:99:423,0,221	0/1:23,19:36:99:694,0,206	0/0:36,0:36:90.27:0,90,1167	0/0:74,0:74:99:0,208,2706	0/0:43,0:42:99:0,123,1564	0/0:27,0:27:66.21:0,66,865
chr10	72278184	.	G	GCA	2457.92	PASS	AB=0.844;AC=8;AF=0.143;AN=56;BaseQRankSum=11.616;DP=1259;FS=9.159;HRun=0;HaplotypeScore=216.0822;InbreedingCoeff=0.4113;MQ=61.68;MQ0=13;MQRankSum=-0.298;QD=13.81;ReadPosRankSum=-8.889;VQSLOD=0.2908;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:15,19:31:23.60:553,24,0	0/0:7,0:7:18.06:0,18,236	0/0:49,0:17:15.13:0,15,201	0/0:55,0:18:23.74:0,24,229	0/0:37,0:37:99:0,99,1301	0/0:34,0:34:96.30:0,96,1247	0/0:50,0:50:99:0,120,1531	0/0:49,0:49:99:0,126,1630	0/0:72,0:72:99:0,196,2530	0/0:72,0:72:99:0,193,2466	0/0:22,0:22:54.18:0,54,710	0/1:23,7:30:50.21:354,0,50	1/1:18,16:33:35.08:848,35,0	0/0:71,0:71:99:0,196,2531	0/0:76,0:76:99:0,211,2731	0/0:75,0:75:99:0,210,2700	0/0:29,0:29:49.97:0,50,993	0/0:32,1:33:29.92:0,30,958	0/0:16,0:16:32.99:0,33,411	0/0:36,0:36:93.30:0,93,1222	0/0:161,0:160:99:0,418,5433	0/1:25,4:29:99:332,0,113	0/1:17,3:20:63.07:200,0,63	0/1:24,7:28:26.34:319,0,26	0/0:26,0:26:69.20:0,69,886	0/0:68,0:68:99:0,190,2485	0/0:31,0:30:84.27:0,84,1100	0/0:8,0:8:21.54:0,22,277
chr10	72278273	.	ACGTG	A	1767.07	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=19.626;DP=1342;FS=15.360;HRun=0;HaplotypeScore=322.6049;InbreedingCoeff=0.9033;MQ=59.68;MQ0=8;MQRankSum=-1.048;QD=7.21;ReadPosRankSum=3.341;VQSLOD=0.5699;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:61,3:64:30.17:0,30,1196	0/0:17,0:17:51.18:0,51,1420	0/0:38,0:15:34.70:0,35,599	0/0:55,0:19:48.05:0,48,825	0/0:22,0:22:60.21:0,60,1671	0/0:24,0:24:66.23:0,66,1823	0/0:73,0:73:99:0,211,5560	0/0:39,0:39:99:0,117,3138	0/0:56,0:56:99:0,163,4283	0/0:73,0:73:99:0,214,5817	0/0:24,0:24:66.19:0,66,1754	1/1:54,0:54:99:502,112,0	1/1:59,2:61:44.43:480,44,0	0/0:71,0:71:99:0,208,5646	0/0:67,0:67:99:0,202,5323	0/0:51,0:51:99:0,147,3839	0/0:31,0:31:87.30:0,87,2337	0/0:24,0:24:72.25:0,72,1887	0/0:16,0:16:39.13:0,39,1079	0/0:30,0:30:87.28:0,87,2293	0/0:177,0:177:99:0,501,13391	1/1:53,1:53:79.32:414,79,0	0/1:25,0:25:3.99:195,0,4	1/1:48,3:48:14.95:340,15,0	0/0:30,0:30:90.31:0,90,2438	0/0:50,0:50:99:0,147,4030	0/0:39,0:39:99:0,114,2999	0/0:26,0:26:75.21:0,75,1940
chr10	72278276	.	TGC	T	7599.73	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=19.043;DP=1349;FS=13.656;HRun=0;HaplotypeScore=251.5306;InbreedingCoeff=0.9800;MQ=60.14;MQ0=8;MQRankSum=-1.463;QD=31.02;ReadPosRankSum=3.781;VQSLOD=3.7075;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:65:79.98:0,80,1220	0/0:18,0:18:54.17:0,54,1055	0/0:35,0:14:23.12:0,23,374	0/0:56,0:21:40.25:0,40,579	0/0:25,0:25:72.22:0,72,1381	0/0:25,0:25:69.22:0,69,1351	0/0:74,0:74:99:0,220,4305	0/0:40,0:40:99:0,120,2323	0/0:55,0:55:99:0,162,3036	0/0:72,0:72:99:0,217,4112	0/0:25,0:25:72.19:0,72,1371	1/1:1,52:53:99:1929,126,0	1/1:10,49:59:99:2156,151,0	0/0:72,0:72:99:0,216,4216	0/0:67,0:67:99:0,202,3962	0/0:50,0:50:99:0,147,2608	0/0:30,0:30:87.24:0,87,1683	0/0:23,0:23:69.12:0,69,1209	0/0:13,0:13:39.12:0,39,746	0/0:30,0:30:90.24:0,90,1646	0/0:176,0:176:99:0,518,9711	1/1:5,51:55:86.30:1273,86,0	1/1:4,23:27:7.29:836,7,0	1/1:15,35:47:99:1405,103,0	0/0:33,0:33:96.29:0,96,1824	0/0:50,0:50:99:0,150,2951	0/0:38,0:38:99:0,111,2176	0/0:29,0:29:87.21:0,87,1631
chr10	72278373	.	TGC	T	9893.41	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=23.335;DP=1195;FS=7.117;HRun=0;HaplotypeScore=226.3103;InbreedingCoeff=0.9874;MQ=57.96;MQ0=13;MQRankSum=0.287;QD=22.43;ReadPosRankSum=4.315;VQSLOD=4.1267;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:49,0:50:75.38:571,75,0	0/0:20,0:20:57.07:0,57,899	0/0:35,0:13:8.50:0,9,138	0/0:44,0:13:13.31:0,13,255	0/0:28,0:28:78.21:0,78,1376	0/0:31,0:31:77.09:0,77,1501	0/0:39,0:39:88.94:0,89,1719	0/0:35,0:35:69.57:0,70,1376	0/0:55,0:55:99:0,101,2362	1/1:6,66:72:99:2718,187,0	1/1:0,22:22:51.17:751,51,0	1/1:42,0:40:86.64:663,87,0	1/1:41,0:41:95.61:732,96,0	0/0:63,0:63:99:0,161,2941	0/0:62,0:62:99:0,167,3089	0/0:46,0:46:99:0,129,2263	1/1:0,36:35:90.30:1323,90,0	1/1:3,13:16:45.08:590,45,0	0/0:23,0:23:58.72:0,59,1068	0/0:28,0:28:66.18:0,66,1394	0/0:146,0:146:99:0,350,6419	1/1:39,0:39:67.94:515,68,0	1/1:34,1:35:50.43:389,50,0	1/1:54,0:52:95.51:737,96,0	1/1:4,30:34:63.19:905,63,0	0/0:53,0:53:83.82:0,84,2152	0/0:22,0:22:66.02:0,66,1087	0/0:23,0:23:66.01:0,66,964
chr10	72278374	.	GCGCA	G	8944.68	PASS	AB=0.931;AC=15;AF=0.268;AN=56;BaseQRankSum=12.334;DP=1189;FS=11.690;HRun=0;HaplotypeScore=269.0774;InbreedingCoeff=0.7234;MQ=58.43;MQ0=12;MQRankSum=1.849;QD=23.54;ReadPosRankSum=0.399;VQSLOD=3.0339;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,27:47:56.90:1265,57,0	0/0:20,0:20:57.07:0,57,1285	0/0:36,0:12:15.32:0,15,244	0/0:45,0:14:16.40:0,16,471	0/0:27,0:27:81.22:0,81,2085	0/0:32,0:32:93.22:0,93,2334	0/0:40,0:40:99:0,111,2643	0/0:34,0:34:95.98:0,96,2049	0/0:54,0:56:96.97:0,97,3605	0/1:70,2:72:99:250,0,175	0/0:22,0:22:29.81:0,30,80	1/1:16,25:40:90.18:1584,90,0	1/1:11,30:41:96.19:1692,96,0	0/0:61,0:61:99:0,177,4381	0/0:61,0:61:99:0,183,4621	0/0:44,0:44:99:0,129,3382	0/0:36,0:35:54.51:0,55,145	0/1:14,2:16:78.30:120,0,78	0/0:24,0:24:69.01:0,69,1595	0/0:29,0:29:84.15:0,84,2095	0/0:145,0:145:99:0,415,9769	1/1:11,27:39:70.15:1189,70,0	1/1:3,32:35:51.92:1018,52,0	1/1:12,40:51:95.65:1807,96,0	0/1:33,1:34:20.49:20,0,57	0/0:52,0:52:99:0,152,3365	0/0:22,0:22:66.02:0,66,1574	0/0:23,0:23:66.02:0,66,1433
chr10	72278376	.	GCA	G	4676.96	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=22.901;DP=1200;FS=3.675;HRun=0;HaplotypeScore=238.5064;InbreedingCoeff=0.9687;MQ=58.39;MQ0=12;MQRankSum=5.857;QD=10.75;ReadPosRankSum=4.033;VQSLOD=4.3478;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:47,0:47:12.02:283,12,0	0/0:20,0:20:42.14:0,42,685	0/0:38,0:12:10.50:0,10,89	0/0:45,0:14:25.24:0,25,312	0/0:31,0:31:87.20:0,87,1269	0/0:32,1:33:53.35:0,53,1281	0/0:40,1:41:53.08:0,53,1422	0/0:31,2:33:4.38:0,4,1035	0/0:56,1:57:50.80:0,51,1908	1/1:69,1:70:99:897,120,0	1/1:23,0:23:50.34:340,50,0	1/1:41,0:39:78.36:436,78,0	1/1:40,0:40:78.35:429,78,0	0/0:61,1:62:99:0,126,2470	0/0:62,1:63:99:0,132,2577	0/0:45,0:45:99:0,120,1905	1/1:37,0:36:68.90:571,69,0	1/1:17,0:16:26.09:254,26,0	0/0:24,2:26:26.26:0,26,873	0/0:28,1:29:38.36:0,38,1131	0/0:139,6:145:99:0,204,5167	1/1:38,0:38:59.70:318,60,0	1/1:33,0:33:48.97:267,49,0	1/1:56,0:53:87:479,87,0	1/1:33,0:33:62.06:404,62,0	0/0:48,3:51:24.52:0,25,1643	0/0:22,0:22:54.18:0,54,877	0/0:24,0:24:51.16:0,51,805
chr10	72278629	.	G	GA	3824	PASS	AB=0.905;AC=9;AF=0.161;AN=56;BaseQRankSum=-13.021;DP=782;FS=3.359;HRun=6;HaplotypeScore=86.4413;InbreedingCoeff=0.8385;MQ=79.13;MQ0=0;MQRankSum=-1.136;QD=25.16;ReadPosRankSum=1.473;VQSLOD=3.7721;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1071	0/0:21,0:21:60.12:0,60,605	0/0:21,0:21:51.06:0,51,498	0/0:15,0:15:4.85:0,5,223	0/0:27,0:27:78.17:0,78,795	0/0:28,0:28:81.18:0,81,826	0/0:21,0:21:57.13:0,57,582	0/0:34,0:34:96.22:0,96,979	0/0:28,0:28:81.18:0,81,826	1/1:6,32:38:96.31:1207,96,0	1/1:2,20:22:54.09:644,54,0	0/0:34,0:34:93.21:0,93,946	0/0:28,0:28:75.17:0,75,765	0/0:36,0:36:99:0,99,1010	0/0:35,0:35:99:0,105,1065	0/0:28,0:28:84.18:0,84,850	1/1:1,27:28:78.25:981,78,0	0/0:25,0:25:37.77:0,38,697	0/0:18,0:18:54.12:0,54,550	0/0:27,0:27:78.16:0,78,788	0/0:34,0:34:87.17:0,87,874	0/0:31,0:31:75.17:0,75,764	0/0:36,0:36:93.21:0,93,947	0/0:29,0:29:78.15:0,78,786	1/1:1,25:26:75.24:944,75,0	0/1:34,4:38:48.75:49,0,810	0/0:24,0:24:66.15:0,66,673	0/0:14,0:14:39.09:0,39,398
chr10	72278888	.	G	GT	5271.11	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=18.577;DP=849;FS=0.631;HRun=1;HaplotypeScore=111.8994;InbreedingCoeff=1.0000;MQ=88.55;MQ0=0;MQRankSum=-8.370;QD=27.03;ReadPosRankSum=3.379;VQSLOD=4.8175;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:39,17:56:99:1467,152,0	0/0:18,0:18:54.18:0,54,755	0/0:35,0:35:99:0,102,1354	0/0:30,0:30:87.25:0,87,1182	0/0:25,0:25:72.24:0,72,996	0/0:18,0:18:54.17:0,54,738	0/0:27,0:27:78.24:0,78,1070	0/0:39,0:39:99:0,111,1534	0/0:30,0:30:87.28:0,87,1200	0/0:28,0:28:84.28:0,84,1172	0/0:23,0:23:69.23:0,69,962	1/1:24,11:35:91.77:911,92,0	1/1:21,4:25:71.40:745,71,0	0/0:35,0:35:99:0,105,1468	0/0:38,0:38:99:0,114,1594	0/0:37,0:37:99:0,111,1536	0/0:39,0:39:99:0,114,1574	0/0:29,0:29:84.28:0,84,1175	0/0:21,0:21:57.15:0,57,775	0/0:27,0:27:81.26:0,81,1115	0/0:50,0:50:99:0,150,2080	1/1:15,7:22:59.06:605,59,0	1/1:20,4:24:69.90:703,70,0	1/1:23,10:33:74.29:841,74,0	0/0:23,0:23:69.23:0,69,965	0/0:33,0:33:93.30:0,93,1284	0/0:35,0:35:99:0,105,1450	0/0:14,0:14:42.14:0,42,587
chr10	72278890	.	AT	A	3607.64	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=18.930;DP=854;FS=0.317;HRun=2;HaplotypeScore=116.8184;InbreedingCoeff=1.0000;MQ=90.01;MQ0=0;MQRankSum=-4.519;QD=18.79;ReadPosRankSum=4.250;VQSLOD=3.8242;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:37,16:53:99:950,129,0	0/0:18,0:18:54.18:0,54,809	0/0:36,0:36:96.30:0,96,1382	0/0:33,0:33:90.30:0,90,1346	0/0:25,0:25:72.24:0,72,1078	0/0:19,0:19:57.19:0,57,851	0/0:26,0:26:78.26:0,78,1169	0/0:38,0:38:99:0,105,1521	0/0:30,0:30:84.26:0,84,1218	0/0:28,0:28:81.27:0,81,1198	0/0:24,0:24:72.23:0,72,1059	1/1:24,12:36:86.46:718,86,0	1/1:21,4:25:69.44:570,69,0	0/0:36,0:36:99:0,105,1574	0/0:38,0:38:99:0,114,1684	0/0:37,0:37:99:0,111,1663	0/0:40,0:40:99:0,114,1689	0/0:30,0:30:87.26:0,87,1261	0/0:22,0:22:63.21:0,63,934	0/0:27,0:27:75.24:0,75,1102	0/0:49,0:49:99:0,147,2133	1/1:14,7:21:49.41:385,49,0	1/1:20,4:24:58.35:486,58,0	1/1:23,10:33:60.17:499,60,0	0/0:23,0:23:66.20:0,66,967	0/0:32,0:32:96.33:0,96,1439	0/0:37,0:37:99:0,111,1607	0/0:14,0:14:42.14:0,42,629
chr10	72280583	.	TTA	T	2177.13	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=10.487;DP=437;FS=1.748;HRun=0;HaplotypeScore=62.1159;InbreedingCoeff=0.9324;MQ=70.59;MQ0=0;MQRankSum=0.281;QD=12.10;ReadPosRankSum=-1.160;VQSLOD=3.1842;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:41.97:0,42,377	0/0:8,0:8:24.08:0,24,380	0/1:9,0:9:4.54:5,0,217	0/0:8,0:8:11.99:0,12,135	0/0:21,0:21:56.75:0,57,835	0/0:16,0:16:48.13:0,48,730	0/0:13,0:13:36.03:0,36,462	0/0:27,0:27:75.21:0,75,1149	0/0:12,0:12:36.12:0,36,574	1/1:19,0:19:36.05:306,36,0	1/1:15,0:15:25.44:177,25,0	1/1:13,1:14:37.22:268,37,0	1/1:17,0:17:30.41:228,30,0	0/0:19,0:19:57.16:0,57,865	0/0:12,0:12:33.07:0,33,488	0/0:10,0:10:30.06:0,30,405	1/1:24,0:23:45.45:221,45,0	1/1:2,16:18:35.94:492,36,0	0/0:22,0:22:66.19:0,66,992	0/0:6,0:6:18.03:0,18,243	0/0:12,0:12:36.09:0,36,558	1/1:13,0:13:28.97:166,29,0	1/1:17,0:17:27.40:197,27,0	1/1:16,1:17:35.22:207,35,0	1/1:16,1:17:13.10:130,13,0	0/0:24,0:24:67.11:0,67,995	0/0:21,0:21:63.15:0,63,924	0/0:7,0:7:21.04:0,21,304
chr10	72280584	.	TA	T	4550.22	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=7.351;DP=433;FS=3.422;HRun=1;HaplotypeScore=45.9234;InbreedingCoeff=0.9217;MQ=70.68;MQ0=0;MQRankSum=0.314;QD=25.71;ReadPosRankSum=-1.217;VQSLOD=4.3618;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:40.54:0,41,251	0/0:8,0:8:24.06:0,24,289	0/1:9,0:9:11.50:11,0,160	0/0:8,0:8:11.99:0,12,119	0/0:21,0:21:56.64:0,57,659	0/0:16,0:16:48.12:0,48,576	0/0:13,0:13:36.02:0,36,384	0/0:26,0:26:75.20:0,75,895	0/0:12,0:12:36.10:0,36,438	1/1:12,6:18:52.35:563,52,0	1/1:7,8:15:41.62:433,42,0	1/1:7,7:14:39.05:444,39,0	1/1:10,7:17:45.95:512,46,0	0/0:20,0:20:60.13:0,60,699	0/0:11,0:11:33.08:0,33,389	0/0:10,0:10:30.04:0,30,326	1/1:0,24:24:48.16:667,48,0	1/1:17,1:18:35.94:309,36,0	0/0:22,0:22:66.17:0,66,781	0/0:6,0:6:18.03:0,18,197	0/0:12,0:12:36.08:0,36,436	1/1:1,12:13:29.86:305,30,0	1/1:7,10:17:42.54:513,43,0	1/1:8,7:15:42.53:474,43,0	1/1:2,15:17:24.95:319,25,0	0/0:24,0:24:44.19:0,44,762	0/0:21,0:21:63.13:0,63,736	0/0:7,0:7:21.02:0,21,234
chr10	72280585	.	A	AT	167.07	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.125;DP=431;FS=8.484;HRun=9;HaplotypeScore=61.2303;InbreedingCoeff=0.5985;MQ=71.81;MQ0=0;MQRankSum=-0.271;QD=8.79;ReadPosRankSum=-2.949;VQSLOD=0.7174;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:19:26.74:261,27,0	0/0:8,0:8:20.99:0,21,182	0/0:9,0:9:5.99:0,6,110	0/0:9,0:9:4.81:0,5,31	0/0:21,0:21:53.98:0,54,468	0/0:16,0:16:41.99:0,42,365	0/0:12,0:12:26.96:0,27,226	0/0:26,0:26:65.96:0,66,570	0/0:12,0:12:32.98:0,33,286	0/0:18,0:18:9.01:0,9,29	0/0:15,0:15:5.06:0,5,28	0/0:14,0:14:12.11:0,12,30	0/0:15,0:15:14.40:0,14,42	0/0:20,0:20:50.96:0,51,439	0/0:11,0:11:26.99:0,27,234	0/0:10,0:10:20.99:0,21,182	0/0:24,0:23:24.57:0,25,56	0/0:18,0:18:22.10:0,22,62	0/0:22,0:22:59.98:0,60,520	0/0:6,0:6:15:0,15,130	0/0:12,0:12:32.99:0,33,287	0/0:13,0:13:7.75:0,8,18	0/0:17,0:17:17.98:0,18,52	0/0:15,0:15:11.54:0,12,28	0/0:17,0:17:15.54:0,16,43	0/0:25,0:25:50.89:0,51,443	0/0:20,0:20:47.93:0,48,410	0/0:7,0:7:14.99:0,15,130
chr10	72281075	.	C	CTTTCTTTT	2501.22	PASS	AB=0.891;AC=15;AF=0.268;AN=56;BaseQRankSum=7.047;DP=574;FS=7.226;HRun=0;HaplotypeScore=152.1560;InbreedingCoeff=0.3332;MQ=65.04;MQ0=6;MQRankSum=-7.693;QD=11.97;ReadPosRankSum=-6.995;VQSLOD=-0.7136;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:40:26.44:182,0,26	0/0:17,0:18:47.88:0,48,776	0/0:27,0:15:13.01:0,13,260	0/0:22,0:11:13.90:0,14,120	0/0:24,0:27:66.97:0,67,1318	0/0:20,0:20:43.32:0,43,915	0/0:21,0:21:52.61:0,53,841	0/0:22,0:22:52.91:0,53,899	0/0:20,0:21:60.11:0,60,1388	1/1:3,0:27:65.13:953,65,0	1/1:4,0:16:17.55:299,18,0	0/1:11,0:11:29.60:140,0,30	0/1:6,0:12:15.71:54,0,16	0/0:15,0:15:21.95:0,22,693	0/0:22,0:22:48:0,48,996	0/0:14,0:14:39.12:0,39,902	1/1:10,0:32:20.84:556,21,0	0/1:15,0:15:88.60:153,0,89	0/0:27,0:25:28.16:0,28,627	0/0:23,0:24:60.83:0,61,1222	0/0:19,0:21:6.82:0,7,622	0/1:8,0:8:26.75:27,0,40	0/1:14,0:14:32.79:75,0,33	0/1:9,0:9:10:40,0,10	1/1:0,10:21:6.02:200,6,0	0/0:29,0:30:55.07:0,55,1300	0/0:22,0:22:35.06:0,35,866	0/0:9,0:10:24.08:0,24,529
chr10	72282185	.	C	CA	1597.87	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.673;DP=694;FS=1.903;HRun=0;HaplotypeScore=108.3118;InbreedingCoeff=0.9954;MQ=73.84;MQ0=0;MQRankSum=-2.634;QD=15.67;ReadPosRankSum=3.467;VQSLOD=5.5381;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,107,634	0/0:9,0:9:26.99:0,27,335	0/0:22,0:21:62.77:0,63,704	0/0:20,0:20:28.11:0,28,510	0/0:22,0:22:66.09:0,66,828	0/0:23,0:23:64.75:0,65,867	0/0:35,0:35:95.12:0,95,1258	0/0:25,0:25:69.16:0,69,846	0/0:23,0:23:66.11:0,66,862	1/1:7,15:22:57.20:485,57,0	1/1:4,13:17:15.57:267,16,0	0/0:29,0:29:83.41:0,83,457	0/0:19,0:19:54.41:0,54,290	0/0:25,0:25:75.19:0,75,966	0/0:32,0:32:93.19:0,93,1222	0/0:20,0:20:60.05:0,60,777	1/1:8,26:34:41.57:543,42,0	0/0:30,0:30:82.96:0,83,434	0/0:19,0:19:54.15:0,54,690	0/0:11,0:11:33.10:0,33,444	0/0:35,0:35:96.21:0,96,1203	0/0:21,0:21:53.83:0,54,269	0/0:18,0:18:45.02:0,45,237	0/0:34,0:34:94.29:0,94,476	1/1:6,23:29:47.53:463,48,0	0/0:22,1:23:38.94:0,39,680	0/0:22,0:22:66.21:0,66,902	0/0:24,0:24:69.22:0,69,945
chr10	72282186	.	C	CA	2443.67	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=8.983;DP=692;FS=2.138;HRun=0;HaplotypeScore=106.2979;InbreedingCoeff=0.4309;MQ=73.91;MQ0=0;MQRankSum=-2.018;QD=8.85;ReadPosRankSum=-0.930;VQSLOD=3.6780;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:51,0:51:73.46:73,0,111	0/0:9,0:9:26.75:0,27,314	0/0:22,0:21:62.21:0,62,617	0/0:19,0:19:46.08:0,46,495	0/0:22,0:22:62.64:0,63,782	0/0:23,0:23:61.75:0,62,823	0/0:35,0:36:98:0,98,1240	0/0:23,0:23:63.15:0,63,758	0/0:23,0:23:59.87:0,60,789	1/1:7,15:22:66.08:652,66,0	1/1:4,13:17:35.93:363,36,0	0/0:29,0:29:28.82:0,29,137	0/1:20,0:20:44.85:52,0,45	0/0:24,0:24:69.19:0,69,895	0/0:32,0:32:95.93:0,96,1222	0/0:20,0:20:39.38:0,39,743	1/1:9,26:35:79.57:767,80,0	0/1:30,0:30:28.78:29,0,74	0/0:18,0:18:54.14:0,54,672	0/0:11,0:11:33.10:0,33,443	0/0:35,0:35:99:0,99,1215	0/1:21,0:21:14.01:14,0,40	0/1:17,0:17:34.96:35,0,46	0/1:34,0:34:34.87:35,0,73	1/1:6,23:29:68.71:605,69,0	0/0:22,1:23:27.25:0,27,623	0/0:23,0:23:63.21:0,63,852	0/0:24,0:24:66.22:0,66,902
chr10	72283483	.	T	TG	2916.19	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.654;DP=613;FS=1.385;HRun=7;HaplotypeScore=81.1584;InbreedingCoeff=0.9899;MQ=82.20;MQ0=0;MQRankSum=-1.105;QD=25.81;ReadPosRankSum=-0.517;VQSLOD=3.9669;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:10.14:55,10,0	0/0:14,0:14:39.06:0,39,377	0/0:29,0:29:37.46:0,37,437	0/0:22,0:22:41.20:0,41,329	0/0:18,0:18:51.06:0,51,486	0/0:13,0:13:30.03:0,30,284	0/0:23,0:23:63.10:0,63,608	0/0:19,0:19:36.04:0,36,348	0/0:25,0:25:69.10:0,69,666	0/0:21,0:21:51.08:0,51,492	0/0:20,0:20:45.06:0,45,434	1/1:1,16:17:48.15:580,48,0	1/1:3,19:22:51.16:616,51,0	0/0:22,0:22:63.10:0,63,608	0/0:35,0:35:84.12:0,84,811	0/0:33,0:33:99:0,99,956	0/0:32,0:32:93.14:0,93,898	0/0:19,0:19:54.06:0,54,514	0/0:10,0:10:24.03:0,24,232	0/0:21,0:21:54.07:0,54,515	0/0:26,0:26:75.05:0,75,707	1/1:1,15:16:48.06:547,48,0	1/1:1,14:15:36.11:435,36,0	1/1:3,27:31:72.22:869,72,0	0/0:27,0:27:66.10:0,66,636	0/0:32,0:32:75.11:0,75,724	0/0:26,0:26:69.11:0,69,666	0/0:13,0:13:39.06:0,39,377
chr10	72284311	.	T	TG	2315.36	PASS	AB=0.976;AC=12;AF=0.214;AN=56;BaseQRankSum=-7.260;DP=711;FS=5.649;HRun=8;HaplotypeScore=78.0731;InbreedingCoeff=0.7948;MQ=83.05;MQ0=0;MQRankSum=-0.249;QD=14.56;ReadPosRankSum=-0.966;VQSLOD=3.5232;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,1:19:5.85:45,6,0	0/0:11,0:11:27:0,27,247	0/0:30,0:30:40.56:0,41,354	0/1:19,0:19:35.24:35,0,191	0/0:34,1:35:49.43:0,49,700	0/0:17,0:17:35.99:0,36,325	0/0:25,0:26:68.03:0,68,598	0/0:40,0:40:93.03:0,93,847	0/0:33,0:33:89.96:0,90,814	1/1:7,22:29:41.73:731,42,0	1/1:4,12:16:27.08:312,27,0	0/0:22,0:22:57.02:0,57,522	0/0:27,0:28:71.04:0,71,629	0/0:25,0:25:62.97:0,63,575	0/0:37,0:37:84.01:0,84,764	0/0:26,0:26:72.02:0,72,651	1/1:6,26:32:26.31:810,26,0	0/0:11,0:11:30:0,30,269	0/0:26,0:26:60.02:0,60,546	0/0:39,1:40:84.98:0,85,811	0/0:31,0:31:75.02:0,75,686	0/0:32,0:32:77.98:0,78,705	0/0:25,0:25:57.02:0,57,521	0/0:31,0:31:87.01:0,87,796	1/1:5,19:24:26.69:553,27,0	0/1:19,1:20:1.63:2,0,241	0/0:22,0:22:57.03:0,57,521	0/0:4,0:4:12.01:0,12,110
chr10	72285194	.	C	CTGTT	7236.94	PASS	AB=0.789;AC=10;AF=0.179;AN=56;BaseQRankSum=-11.406;DP=668;FS=5.050;HRun=0;HaplotypeScore=107.8157;InbreedingCoeff=0.7742;MQ=64.66;MQ0=1;MQRankSum=-0.668;QD=36.74;ReadPosRankSum=1.062;VQSLOD=5.0293;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,41:64:67.99:2631,68,0	0/0:14,0:14:30.10:0,30,493	0/0:17,0:15:30.06:0,30,430	0/0:13,0:13:19.27:0,19,388	0/0:38,0:38:81.21:0,81,1244	0/0:22,0:22:39.12:0,39,617	0/0:32,0:32:69.20:0,69,1075	0/0:20,0:20:30.09:0,30,451	0/0:15,0:16:39.13:0,39,619	1/1:12,14:26:45.15:1098,45,0	0/1:8,13:20:8.06:772,0,8	0/0:20,0:20:45.15:0,45,740	0/0:20,0:20:48.16:0,48,789	0/0:17,0:17:45.13:0,45,708	0/0:18,0:18:36.12:0,36,592	0/0:19,0:19:42.14:0,42,691	1/1:14,25:41:69.24:1687,69,0	0/0:8,0:22:39.04:0,39,363	0/0:16,0:16:33.11:0,33,541	0/0:30,0:30:63.21:0,63,1036	0/0:31,0:31:63.18:0,63,980	0/0:22,0:22:42.09:0,42,637	0/0:20,0:20:42.14:0,42,681	0/0:29,0:29:72.19:0,72,1101	1/1:5,16:21:42.14:1027,42,0	0/1:23,1:24:22.22:22,0,716	0/0:19,0:19:36.12:0,36,592	0/0:16,0:16:33.05:0,33,487
chr10	72285527	.	TACAGACAGACAG	T	3142.51	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=5.273;DP=575;FS=0.000;HRun=0;HaplotypeScore=197.0932;InbreedingCoeff=0.5984;MQ=63.82;MQ0=4;MQRankSum=-5.934;QD=22.29;ReadPosRankSum=0.423;VQSLOD=2.7118;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:14.98:0,15,450	0/0:9,0:9:21.07:0,21,977	0/0:26,0:21:3.80:0,4,311	0/0:13,0:11:18.06:0,18,364	0/0:39,0:39:77.90:0,78,3011	0/0:22,0:22:51.13:0,51,1858	0/0:17,0:17:48.14:0,48,2198	0/0:35,0:35:42.12:0,42,952	0/0:20,0:20:48.16:0,48,2156	0/1:30,0:30:99:411,0,601	0/0:21,0:21:15.05:0,15,285	1/1:5,7:12:6.02:210,6,0	1/1:7,10:17:18.06:603,18,0	0/0:15,0:15:27.08:0,27,1042	0/0:21,0:21:45.15:0,45,1981	0/0:15,0:15:42.12:0,42,1727	0/1:16,0:16:75.97:76,0,266	0/1:12,0:12:50.84:51,0,362	0/0:21,0:21:33.10:0,33,1318	0/0:36,0:35:90.24:0,90,3577	0/0:24,0:24:69.22:0,69,2862	1/1:5,13:18:24:734,24,0	1/1:6,15:21:33.58:1137,34,0	1/1:7,8:15:3:91,3,0	0/0:14,0:14:14.83:0,15,287	0/0:21,0:21:48.10:0,48,1871	0/0:32,0:32:72.21:0,72,3270	0/0:10,0:10:18.06:0,18,973
chr10	72285547	.	GACAGACAGACAGAC	G	2182.67	PASS	AB=0.979;AC=9;AF=0.161;AN=56;BaseQRankSum=7.123;DP=554;FS=2.622;HRun=0;HaplotypeScore=211.2508;InbreedingCoeff=0.0716;MQ=56.05;MQ0=10;MQRankSum=-6.258;QD=15.16;ReadPosRankSum=-0.867;VQSLOD=2.6097;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:14.98:0,15,502	0/0:9,0:9:24.08:0,24,1338	0/0:18,0:13:3.80:0,4,311	0/0:13,0:8:17.51:0,18,363	0/0:36,0:36:55.13:0,55,3662	0/0:26,0:24:31.23:0,31,2440	0/0:20,0:20:44.25:0,44,2853	0/0:22,0:20:48.61:0,49,1191	0/0:18,0:18:54.19:0,54,2591	0/1:29,0:28:99:383,0,1041	0/0:20,0:19:21.07:0,21,544	0/1:13,0:13:99:101,0,122	1/1:12,2:14:18.06:485,18,0	0/0:14,0:14:39.12:0,39,1432	0/0:21,0:21:46.82:0,47,2378	0/0:16,0:16:34.75:0,35,2018	0/1:20,0:19:85.61:86,0,548	0/1:10,0:10:41.80:42,0,764	0/0:16,0:16:45.14:0,45,1821	0/0:35,0:34:93.25:0,93,4193	0/0:29,0:29:63.32:0,63,3530	0/1:19,1:20:99:435,0,175	0/1:16,1:17:6.37:677,0,6	0/1:20,1:21:77.69:117,0,78	0/0:15,0:14:2.07:0,2,403	0/0:18,0:18:54.12:0,54,2191	0/0:32,0:32:87.26:0,87,4237	0/0:6,0:6:18.06:0,18,1133
chr10	72285549	.	CAG	C	1404.82	PASS	AB=0.954;AC=13;AF=0.232;AN=56;BaseQRankSum=12.532;DP=558;FS=0.473;HRun=0;HaplotypeScore=103.8677;InbreedingCoeff=0.3336;MQ=54.79;MQ0=11;MQRankSum=-2.951;QD=7.63;ReadPosRankSum=3.674;VQSLOD=3.2433;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:15.05:0,15,230	0/0:9,0:9:24:0,24,421	0/0:18,0:12:20.06:0,20,360	0/0:14,0:8:19.87:0,20,286	0/0:35,0:35:90.29:0,90,1546	0/0:27,0:25:69.19:0,69,1120	0/0:20,0:20:60.20:0,60,1050	0/0:23,0:21:54.01:0,54,885	0/0:18,0:18:54.18:0,54,1007	1/1:17,12:28:67.18:687,67,0	1/1:3,18:20:7.32:198,7,0	0/1:13,0:13:5.75:6,0,154	0/1:14,0:14:4.15:58,0,4	0/0:13,0:13:39.08:0,39,636	0/0:19,0:19:57.19:0,57,1023	0/0:16,0:16:45.06:0,45,720	0/1:14,6:19:44.69:182,0,45	0/1:9,1:10:61.25:61,0,90	0/0:17,0:17:51.12:0,51,816	0/0:33,0:32:93.32:0,93,1646	0/0:29,0:29:78.17:0,78,1386	0/1:22,0:22:51.22:51,0,221	0/1:19,0:19:31.13:100,0,31	0/1:21,0:21:6.68:7,0,75	1/1:1,14:14:17.99:221,18,0	0/0:19,0:19:57.18:0,57,966	0/0:33,0:33:90.20:0,90,1554	0/0:6,0:6:18.06:0,18,347
chr10	72285553	.	CAG	C	1352.71	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=12.807;DP=549;FS=0.000;HRun=0;HaplotypeScore=102.6547;InbreedingCoeff=0.3112;MQ=54.13;MQ0=13;MQRankSum=-3.958;QD=7.39;ReadPosRankSum=3.672;VQSLOD=2.7612;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,1:23:15.01:0,15,182	0/0:9,0:9:24:0,24,419	0/0:21,0:13:33.76:0,34,354	0/0:13,0:7:11.44:0,11,221	0/0:35,0:35:84.25:0,84,1430	0/0:24,0:22:60.20:0,60,996	0/0:22,0:22:60.19:0,60,1020	0/0:20,0:18:48.01:0,48,827	0/0:18,0:18:54.18:0,54,990	1/1:26,1:26:66.40:677,66,0	1/1:19,2:20:8.07:195,8,0	0/1:13,0:13:1.53:2,0,145	0/1:15,0:15:43.24:43,0,55	0/0:12,0:12:36.12:0,36,616	0/0:20,0:20:60.16:0,60,1001	0/0:13,0:13:39.05:0,39,675	0/1:17,0:16:66.22:212,0,66	0/1:10,0:10:39.55:40,0,90	0/0:17,0:17:48.15:0,48,736	0/0:33,0:32:81.27:0,81,1421	0/0:30,0:30:72.17:0,72,1357	0/1:22,0:22:40.12:40,0,261	0/1:22,0:21:51.73:81,0,52	0/1:21,0:21:5.10:5,0,77	1/1:14,1:14:17.99:221,18,0	0/0:18,0:18:51.17:0,51,878	0/0:31,0:31:82.46:0,82,1392	0/0:6,0:6:18.06:0,18,346
chr10	72286130	.	C	CTGA	11109.30	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-13.991;DP=594;FS=1.504;HRun=0;HaplotypeScore=80.9642;InbreedingCoeff=0.9970;MQ=91.85;MQ0=0;MQRankSum=-5.004;QD=53.41;ReadPosRankSum=3.042;VQSLOD=7.2814;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:63.15:1380,63,0	0/0:9,0:9:24.08:0,24,409	0/0:27,0:27:72.15:0,72,1092	0/0:25,0:25:58.33:0,58,823	0/0:32,0:32:96.28:0,96,1550	0/0:29,0:29:84.27:0,84,1405	0/0:26,0:26:72.23:0,72,1201	0/0:41,0:41:99:0,111,1816	0/0:23,0:23:69.23:0,69,1151	1/1:2,29:31:90.28:1961,90,0	1/1:1,20:22:39.13:881,39,0	1/1:1,19:21:42.14:955,42,0	1/1:1,13:16:30.10:691,30,0	0/0:11,0:11:33.10:0,33,531	0/0:20,0:20:60.21:0,60,1023	0/0:13,0:13:39.13:0,39,665	1/1:0,23:23:57.20:1309,57,0	1/1:0,9:9:27.09:622,27,0	0/0:21,0:21:60.19:0,60,980	0/0:27,0:27:78.27:0,78,1326	0/0:26,0:26:69.18:0,69,1095	1/1:1,12:14:30.10:689,30,0	1/1:1,21:22:48.16:1105,48,0	1/1:1,12:13:30.10:689,30,0	1/1:1,13:14:36.12:828,36,0	0/0:24,0:24:69.22:0,69,1126	0/0:27,0:27:81.28:0,81,1381	0/0:5,0:5:15.05:0,15,256
chr10	72287573	.	C	CAA	930.15	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.140;DP=580;FS=0.000;HRun=11;HaplotypeScore=85.5511;InbreedingCoeff=0.9164;MQ=68.89;MQ0=0;MQRankSum=-1.189;QD=26.58;ReadPosRankSum=-0.920;VQSLOD=3.4827;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,24:35:75.61:1025,76,0	0/0:10,0:10:30.05:0,30,291	0/0:5,0:6:8.02:0,8,63	0/0:11,0:12:17.06:0,17,154	0/0:31,0:33:80.56:0,81,751	0/0:26,0:27:77.84:0,78,734	0/0:15,0:17:35.77:0,36,332	0/0:20,0:21:39.99:0,40,380	0/0:17,0:17:45.05:0,45,429	0/0:24,0:26:62.51:0,63,577	0/0:24,0:25:41.91:0,42,449	0/0:29,0:30:56.86:0,57,591	0/0:19,0:19:39.03:0,39,378	0/0:25,0:25:54.01:0,54,524	0/0:25,0:25:63.04:0,63,605	0/0:23,0:23:60.07:0,60,576	0/0:15,0:15:42.06:0,42,407	0/0:18,0:22:62.05:0,62,542	0/0:13,0:14:17.86:0,18,224	0/0:22,0:22:54.02:0,54,513	0/0:17,0:19:41.76:0,42,385	0/0:16,0:16:39.02:0,39,378	0/0:19,0:19:45.02:0,45,430	0/0:14,0:14:36.03:0,36,349	0/0:22,0:22:60.06:0,60,577	0/0:20,0:22:44.68:0,45,469	0/0:29,0:32:65.65:0,66,667	0/0:12,0:12:30.02:0,30,291
chr10	72291382	.	GCAGTTGTGAACACC	G	14803.72	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=16.449;DP=691;FS=5.752;HRun=0;HaplotypeScore=270.6729;InbreedingCoeff=0.9919;MQ=65.46;MQ0=1;MQRankSum=-15.374;QD=77.51;ReadPosRankSum=4.667;VQSLOD=3.9621;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,6545	0/0:12,0:12:33.11:0,33,1921	0/0:25,0:24:69.24:0,69,3875	0/0:22,0:22:53.31:0,53,2701	0/0:42,0:42:99:0,117,6374	0/0:22,0:22:66.23:0,66,4485	0/0:33,0:33:93.32:0,93,5318	0/0:33,0:33:93.32:0,93,5555	0/0:23,0:23:66.23:0,66,4403	1/1:1,21:22:57.18:2033,57,0	1/1:0,15:15:33.11:1279,33,0	1/1:0,22:22:39.13:1664,39,0	1/1:0,18:18:48.16:2048,48,0	0/0:25,0:25:75.26:0,75,4947	0/0:32,0:32:96.33:0,96,5900	0/0:31,0:31:90.31:0,90,5625	1/1:0,12:12:12.04:512,12,0	1/1:2,9:11:15.05:640,15,0	0/0:29,0:29:87.29:0,87,5241	0/0:30,0:30:90.29:0,90,5740	0/0:39,0:39:99:0,108,6482	1/1:0,30:30:69.24:2828,69,0	1/1:1,25:26:45.02:1679,45,0	1/1:2,17:19:24.08:968,24,0	1/1:2,14:16:27.09:1152,27,0	0/0:25,0:25:75.25:0,75,4780	0/0:32,0:32:93.32:0,93,6371	0/0:7,0:7:21.07:0,21,1316
chr10	72292257	.	A	AT	4605.67	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-12.436;DP=561;FS=2.899;HRun=1;HaplotypeScore=53.8889;InbreedingCoeff=0.9600;MQ=75.63;MQ0=0;MQRankSum=-3.043;QD=42.25;ReadPosRankSum=1.542;VQSLOD=5.1877;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.22:0,69,896	0/0:7,0:7:21.07:0,21,273	0/0:21,0:21:59.29:0,59,709	0/0:9,0:10:24.08:0,24,312	0/0:32,0:32:93.30:0,93,1207	0/0:29,0:29:84.26:0,84,1076	0/0:19,0:19:54.15:0,54,672	0/0:24,0:24:66.21:0,66,857	0/0:17,0:17:51.17:0,51,661	1/1:0,25:25:75.24:1103,75,0	1/1:0,22:22:60.20:899,60,0	0/0:20,0:20:57.19:0,57,740	0/0:24,0:24:69.22:0,69,895	0/0:22,0:22:66.20:0,66,842	0/0:23,0:23:66.21:0,66,857	0/0:24,0:24:69.22:0,69,896	1/1:0,15:15:39.13:585,39,0	1/1:1,27:28:81.27:1209,81,0	0/0:15,0:15:45.15:0,45,584	0/0:25,0:25:72.23:0,72,934	0/0:13,0:13:39.13:0,39,506	0/0:15,0:15:45.15:0,45,584	0/0:17,0:17:48.16:0,48,623	0/0:15,0:15:45.15:0,45,584	1/1:0,19:19:54.18:809,54,0	0/0:16,1:17:3.17:0,3,527	0/0:27,0:27:81.26:0,81,1051	0/0:12,0:12:36.12:0,36,467
chr10	72292399	.	CA	C	4068.59	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=12.039;DP=479;FS=2.189;HRun=9;HaplotypeScore=47.1124;InbreedingCoeff=0.9598;MQ=74.45;MQ0=0;MQRankSum=-1.057;QD=21.64;ReadPosRankSum=3.676;VQSLOD=4.1936;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:47.95:429,48,0	0/0:6,0:6:9.03:0,9,104	0/0:13,1:13:5.48:0,5,245	0/0:8,0:8:12.88:0,13,155	0/0:26,0:26:75.22:0,75,864	0/0:27,0:27:75.19:0,75,837	0/0:13,0:13:36.11:0,36,415	0/0:28,0:28:69.09:0,69,769	0/0:17,0:17:42.10:0,42,465	1/1:6,10:16:29.97:263,30,0	1/1:3,24:27:57:522,57,0	1/1:0,17:17:45.02:412,45,0	1/1:2,12:14:33.02:302,33,0	0/0:15,0:15:45.13:0,45,519	0/0:20,0:20:51.13:0,51,570	0/0:19,0:19:54.16:0,54,623	1/1:1,11:12:30.01:275,30,0	1/1:0,21:21:51.03:466,51,0	0/0:14,1:15:11.66:0,12,380	0/0:28,0:28:75.20:0,75,847	0/0:6,0:6:12.04:0,12,138	1/1:4,13:17:39.02:356,39,0	1/1:1,16:17:42.02:384,42,0	1/1:0,8:8:24.01:220,24,0	1/1:7,14:21:48.02:439,48,0	0/0:17,0:17:42.12:0,42,477	0/0:25,0:25:48.13:0,48,545	0/0:7,0:7:15.04:0,15,173
chr10	72293145	.	C	CA	3143.64	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-11.664;DP=574;FS=7.237;HRun=7;HaplotypeScore=60.8440;InbreedingCoeff=0.9982;MQ=68.09;MQ0=2;MQRankSum=0.113;QD=28.84;ReadPosRankSum=-0.497;VQSLOD=3.9970;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.08:0,54,521	0/0:9,0:9:27.04:0,27,261	0/0:23,0:19:37:0,37,362	0/0:25,0:16:21:0,21,210	0/0:26,0:26:66.10:0,66,637	0/0:23,0:23:54.08:0,54,521	0/0:18,0:18:45.07:0,45,435	0/0:23,0:23:51.07:0,51,492	0/0:16,0:16:45.06:0,45,429	1/1:2,23:25:69.20:822,69,0	1/1:2,25:27:66.16:781,66,0	0/0:13,0:13:39.05:0,39,370	0/0:25,0:25:63.07:0,63,601	0/0:13,0:13:33.04:0,33,313	0/0:22,0:22:60.09:0,60,579	0/0:22,0:22:60.08:0,60,575	1/1:5,29:34:60.61:976,61,0	0/0:30,0:30:75.07:0,75,715	0/0:16,0:16:42.02:0,42,396	0/0:25,0:25:72.08:0,72,684	0/0:13,0:13:30.04:0,30,290	0/0:19,0:19:54.05:0,54,506	0/0:19,0:19:45.07:0,45,435	0/0:18,0:18:42.06:0,42,406	1/1:1,22:23:60.18:725,60,0	0/0:18,0:18:48.07:0,48,464	0/0:16,0:16:48.08:0,48,464	0/0:12,0:12:36.04:0,36,341
chr10	72293960	.	T	TC	4802.42	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=15.540;DP=723;FS=0.372;HRun=1;HaplotypeScore=90.8199;InbreedingCoeff=0.9999;MQ=84.57;MQ0=0;MQRankSum=-1.305;QD=37.81;ReadPosRankSum=2.716;VQSLOD=5.3024;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,1752	0/0:16,0:16:48.13:0,48,597	0/0:18,0:18:33.06:0,33,489	0/0:31,0:30:66.68:0,67,788	0/0:28,0:28:84.27:0,84,1090	0/0:27,0:27:78.25:0,78,1013	0/0:27,0:27:81.24:0,81,1025	0/0:40,0:40:99:0,117,1453	0/0:36,0:36:99:0,99,1271	0/0:23,0:23:66.21:0,66,844	0/0:17,0:17:51.16:0,51,651	1/1:0,25:25:66.22:955,66,0	1/1:1,17:18:45.15:640,45,0	0/0:20,0:20:60.20:0,60,779	0/0:39,0:39:99:0,111,1426	0/0:23,0:23:66.21:0,66,845	0/0:21,0:21:63.18:0,63,790	0/0:26,0:26:78.20:0,78,977	0/0:20,0:20:57.18:0,57,726	0/0:26,0:26:78.20:0,78,955	0/0:21,0:21:60.14:0,60,712	1/1:1,34:35:87.29:1256,87,0	1/1:0,15:15:39.13:566,39,0	1/1:0,34:34:96.32:1385,96,0	0/0:23,0:23:69.22:0,69,896	0/0:21,0:21:63.18:0,63,783	0/0:34,0:34:99:0,99,1226	0/0:11,0:11:33.11:0,33,428
chr10	72298102	.	A	AT	4075.85	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-7.045;DP=661;FS=2.632;HRun=9;HaplotypeScore=62.6502;InbreedingCoeff=0.9136;MQ=62.01;MQ0=0;MQRankSum=0.033;QD=23.03;ReadPosRankSum=1.912;VQSLOD=4.6658;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,34:42:87.18:948,87,0	0/0:16,0:16:44.91:0,45,376	0/1:10,0:5:2.75:3,0,43	0/0:13,0:10:8.51:0,9,74	0/0:26,0:26:65.90:0,66,557	0/0:34,0:34:89.91:0,90,771	0/0:16,0:16:47.99:0,48,417	0/0:39,0:39:84.02:0,84,812	0/0:21,0:21:47.98:0,48,417	1/1:4,24:28:72.18:787,72,0	1/1:4,18:23:54.02:566,54,0	0/0:14,0:14:38.97:0,39,335	0/0:15,0:15:35.98:0,36,310	0/0:26,0:26:71.97:0,72,622	0/0:29,0:29:86.97:0,87,751	0/0:25,0:25:68.98:0,69,598	1/1:3,23:26:60.16:663,60,0	1/1:4,22:26:11.14:579,11,0	0/0:21,0:21:50.97:0,51,441	0/0:28,0:28:65.96:0,66,573	0/0:17,0:17:50.96:0,51,437	0/0:22,0:22:54.59:0,55,481	0/0:19,0:19:41.95:0,42,359	0/0:17,0:17:47.99:0,48,417	1/1:0,22:22:48.13:531,48,0	0/0:30,0:30:71.97:0,72,625	0/0:36,0:36:83.91:0,84,721	0/0:20,0:20:53.97:0,54,469
chr10	72299418	.	T	TGC	1560.21	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.214;DP=787;FS=0.000;HRun=0;HaplotypeScore=119.0200;InbreedingCoeff=0.7232;MQ=65.91;MQ0=2;MQRankSum=-0.960;QD=31.20;ReadPosRankSum=2.466;VQSLOD=5.6128;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,42:49:81.55:1655,82,0	0/0:20,0:20:54.13:0,54,646	0/0:12,0:12:1.16:0,1,10	0/0:20,0:17:3.01:0,3,36	0/0:26,0:26:66.12:0,66,745	0/0:25,0:24:57.12:0,57,660	0/0:30,0:30:75.14:0,75,853	0/0:38,0:38:63.14:0,63,710	0/0:26,0:26:66:0,66,763	0/0:40,0:41:99:0,102,1153	0/0:25,0:25:54.05:0,54,618	0/0:31,0:31:72.15:0,72,835	0/0:32,0:32:60.04:0,60,686	0/0:34,0:34:84.17:0,84,969	0/0:23,0:23:57.11:0,57,647	0/0:22,0:22:48.10:0,48,549	0/0:37,0:37:90.21:0,90,1068	0/0:16,0:16:42.03:0,42,476	0/0:17,0:17:29.97:0,30,328	0/0:24,0:24:54.16:0,54,663	0/0:43,0:43:80.93:0,81,959	0/0:28,0:29:65.99:0,66,748	0/0:31,0:31:66.18:0,66,799	0/0:32,0:32:69.20:0,69,848	0/0:33,0:33:83.99:0,84,943	0/0:34,0:35:93.26:0,93,1118	0/0:26,0:26:66.18:0,66,799	0/0:9,0:9:24.08:0,24,300
chr10	72299690	.	ATGT	A	7586.56	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.137;DP=888;FS=5.481;HRun=0;HaplotypeScore=126.1599;InbreedingCoeff=0.9992;MQ=62.15;MQ0=4;MQRankSum=0.918;QD=24.96;ReadPosRankSum=3.733;VQSLOD=4.4284;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:52:99:0,102,1264	0/0:10,0:10:27.09:0,27,537	0/0:35,0:29:24.06:0,24,404	0/0:43,0:38:57.08:0,57,958	0/0:28,0:28:63.17:0,63,1135	0/0:24,0:24:60.20:0,60,1161	0/0:28,0:28:57.16:0,57,1052	0/0:39,0:38:63.20:0,63,1184	0/0:36,0:36:84.24:0,84,1572	1/1:11,28:39:80.94:1053,81,0	1/1:6,16:22:30.01:397,30,0	1/1:12,23:35:42.14:592,42,0	1/1:6,28:34:66.22:931,66,0	0/0:26,0:26:51.15:0,51,935	0/0:45,1:46:71.99:0,72,1961	0/0:33,0:33:72.22:0,72,1345	1/1:4,28:32:72.24:1015,72,0	1/1:4,25:29:60.20:846,60,0	0/0:21,0:20:33.11:0,33,627	0/0:24,0:24:42.11:0,42,772	0/0:49,0:49:99:0,105,1993	1/1:7,18:25:44.96:566,45,0	1/1:6,17:23:32.31:464,32,0	1/1:10,31:41:77.55:1088,78,0	1/1:7,17:24:45.15:634,45,0	0/0:41,1:42:44.97:0,45,1585	0/0:33,0:32:78.22:0,78,1451	0/0:15,0:15:27.09:0,27,534
chr10	72299870	.	ATTC	A	4367.94	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.842;DP=760;FS=0.832;HRun=0;HaplotypeScore=110.7546;InbreedingCoeff=0.9609;MQ=80.65;MQ0=0;MQRankSum=-4.674;QD=33.86;ReadPosRankSum=3.811;VQSLOD=5.0277;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,2732	0/0:16,0:16:45.13:0,45,870	0/0:28,0:30:68.10:0,68,1566	0/0:18,0:18:42.43:0,42,699	0/0:31,0:31:90.29:0,90,1927	0/0:30,0:30:87.30:0,87,1897	0/0:22,0:22:57.20:0,57,1224	0/0:36,0:36:90.31:0,90,1935	0/0:28,0:28:78.27:0,78,1721	0/0:29,0:28:75.26:0,75,1613	0/0:21,0:21:51.17:0,51,1064	1/1:5,23:28:54.18:835,54,0	1/1:0,27:27:66.23:1057,66,0	0/0:24,0:24:69.22:0,69,1418	0/0:35,0:35:99:0,99,2101	0/0:26,0:26:75.26:0,75,1638	0/0:17,0:17:45.15:0,45,975	0/0:17,1:18:3.09:0,3,886	0/0:20,0:20:57.16:0,57,1126	0/0:27,0:27:78.27:0,78,1694	0/0:30,0:30:84.25:0,84,1746	1/1:1,20:21:51.13:775,51,0	1/1:1,18:19:35.74:546,36,0	1/1:0,34:34:72.25:1156,72,0	0/0:38,0:38:99:0,111,2322	0/0:29,0:29:84.28:0,84,1792	0/0:32,0:32:96.33:0,96,2061	0/0:29,0:29:60.17:0,60,1157
chr10	72300176	.	GGGCCATATACCCAGGA	G	16985.53	PASS	AB=0.941;AC=21;AF=0.375;AN=56;BaseQRankSum=16.889;DP=627;FS=0.365;HRun=0;HaplotypeScore=276.4574;InbreedingCoeff=0.9050;MQ=96.52;MQ0=0;MQRankSum=-16.210;QD=77.56;ReadPosRankSum=5.522;VQSLOD=4.1451;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,8003	0/0:12,0:12:33.11:0,33,2606	0/0:37,0:37:99:0,102,6033	0/0:29,0:29:83.77:0,84,4853	0/0:24,0:24:72.25:0,72,5611	0/0:25,0:25:75.26:0,75,5456	0/0:23,0:23:69.24:0,69,4806	0/0:30,0:30:81.28:0,81,5161	0/0:16,0:16:48.16:0,48,3702	1/1:3,24:27:69.24:3166,69,0	1/1:4,18:22:51.17:2261,51,0	1/1:2,20:22:54.19:2534,54,0	1/1:4,19:23:47.76:2252,48,0	0/0:17,0:17:51.13:0,51,3653	0/0:22,0:21:66.23:0,66,4915	0/0:21,0:21:63.22:0,63,4919	1/1:3,12:15:21.07:985,21,0	1/1:5,6:11:6.02:150,6,0	0/0:24,0:24:72.25:0,72,3981	0/0:24,0:24:69.24:0,69,4857	0/0:23,0:23:69.24:0,69,5271	1/1:1,17:18:45.15:1910,45,0	1/1:1,12:13:27.09:1259,27,0	1/1:3,13:16:15.05:511,15,0	1/1:2,18:20:42.14:1905,42,0	0/1:30,2:32:50.51:51,0,6270	0/0:24,0:23:69.24:0,69,4826	0/0:19,0:19:57.20:0,57,4322
chr10	72301556	.	A	AT	2130.02	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-0.853;DP=621;FS=2.073;HRun=9;HaplotypeScore=72.3091;InbreedingCoeff=0.9038;MQ=77.95;MQ0=0;MQRankSum=-1.662;QD=19.02;ReadPosRankSum=1.093;VQSLOD=4.2083;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:27:41.78:0,42,587	0/0:12,0:12:32.98:0,33,286	0/0:19,0:19:38.81:0,39,314	0/1:11,0:11:2.20:2,0,87	0/0:24,0:24:55.99:0,56,470	0/0:24,0:24:53.95:0,54,466	0/0:14,0:14:32.98:0,33,287	0/0:20,0:20:56.98:0,57,495	0/0:21,0:21:56.90:0,57,476	0/0:28,1:31:45.83:0,46,599	0/0:31,0:31:86.95:0,87,750	1/1:1,17:18:42.11:465,42,0	1/1:6,19:25:28.11:538,28,0	0/0:22,0:22:59.97:0,60,520	0/0:26,0:26:68.96:0,69,594	0/0:24,0:24:62.97:0,63,547	0/0:30,0:30:83.91:0,84,716	0/0:25,0:25:62.93:0,63,540	0/0:14,1:15:5.80:0,6,279	0/0:22,1:24:37.84:0,38,546	0/0:17,0:17:38.99:0,39,339	1/1:4,16:20:46.33:487,46,0	1/1:3,20:24:45.84:481,46,0	1/1:0,14:14:30.08:332,30,0	0/0:34,0:34:95.96:0,96,830	0/0:31,0:31:83.98:0,84,729	0/0:28,0:28:74.93:0,75,644	0/0:10,0:10:23.99:0,24,208
chr10	72302124	.	A	ATT	2455.95	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=2.887;DP=494;FS=14.594;HRun=3;HaplotypeScore=96.3274;InbreedingCoeff=0.7289;MQ=73.94;MQ0=8;MQRankSum=0.056;QD=16.05;ReadPosRankSum=-2.089;VQSLOD=-0.3629;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:2.91:29,0,3	0/0:8,0:8:9.02:0,9,121	0/1:36,0:12:11.71:12,0,171	0/1:21,0:16:79.12:79,0,89	0/0:22,0:22:54.18:0,54,729	0/0:9,0:9:24.08:0,24,316	0/0:11,0:11:18.04:0,18,232	0/0:31,0:31:65.23:0,65,845	0/0:16,0:16:23.85:0,24,280	1/1:3,11:15:39.11:588,39,0	1/1:12,0:12:35.02:434,35,0	0/0:18,0:18:42.13:0,42,539	0/0:18,0:18:33.09:0,33,417	0/0:14,0:13:30.10:0,30,404	0/0:16,0:16:30.10:0,30,402	0/0:16,0:16:33.10:0,33,454	1/1:23,0:26:69.78:804,70,0	1/1:9,0:9:18.05:244,18,0	0/0:20,0:19:36.11:0,36,471	0/0:25,0:25:57.18:0,57,762	0/0:13,0:13:24.08:0,24,330	0/0:11,0:11:24.06:0,24,309	0/0:18,0:18:36.08:0,36,442	0/0:12,0:12:23.65:0,24,314	1/1:12,0:14:33.05:451,33,0	0/0:23,0:23:57.19:0,57,782	0/0:25,0:24:57.14:0,57,715	0/0:15,0:15:33.11:0,33,448
chr10	72302380	.	TC	T	1073.36	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.110;DP=742;FS=3.469;HRun=2;HaplotypeScore=84.2528;InbreedingCoeff=0.9960;MQ=93.56;MQ0=0;MQRankSum=-4.343;QD=29.82;ReadPosRankSum=1.543;VQSLOD=3.3450;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,35:36:90.29:1168,90,0	0/0:8,0:8:21.06:0,21,293	0/0:37,0:37:99:0,105,1511	0/0:29,0:29:78.25:0,78,1136	0/0:31,0:31:93.29:0,93,1352	0/0:38,0:38:99:0,114,1668	0/0:20,0:20:60.15:0,60,837	0/0:27,0:27:78.26:0,78,1168	0/0:23,0:23:69.22:0,69,1013	0/0:21,0:21:60.20:0,60,899	0/0:19,0:19:57.19:0,57,854	0/0:19,0:19:51.12:0,51,729	0/0:29,0:29:84.27:0,84,1238	0/0:27,0:27:78.25:0,78,1148	0/0:34,0:34:96.32:0,96,1429	0/0:24,0:24:69.22:0,69,1014	0/0:37,0:37:99:0,111,1662	0/0:19,0:19:54.18:0,54,803	0/0:18,0:18:51.17:0,51,760	0/0:29,0:29:87.29:0,87,1301	0/0:44,0:44:99:0,132,1935	0/0:23,0:23:69.22:0,69,1013	0/0:20,0:20:60.16:0,60,855	0/0:24,0:24:69.22:0,69,1015	0/0:25,0:25:75.25:0,75,1122	0/0:27,0:27:81.27:0,81,1214	0/0:30,0:30:90.29:0,90,1328	0/0:24,0:24:72.24:0,72,1079
chr10	72305696	.	A	AG	9674.28	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-7.552;DP=652;FS=3.164;HRun=2;HaplotypeScore=70.0383;InbreedingCoeff=0.9994;MQ=87.04;MQ0=0;MQRankSum=-4.500;QD=36.65;ReadPosRankSum=1.730;VQSLOD=5.6331;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,33:36:87.29:1247,87,0	0/0:14,0:14:42.13:0,42,520	0/0:20,0:20:54.12:0,54,624	0/0:30,0:30:68.75:0,69,777	0/0:16,0:16:39.12:0,39,474	0/0:14,0:14:39.12:0,39,481	0/0:27,0:27:78.23:0,78,954	0/0:22,0:22:54.14:0,54,638	0/0:22,0:22:66.21:0,66,818	1/1:1,14:15:45.11:617,45,0	1/1:2,9:11:21.07:300,21,0	1/1:1,26:27:75.25:1078,75,0	1/1:0,28:28:78.26:1123,78,0	0/0:23,0:23:63.17:0,63,756	0/0:35,0:35:99:0,102,1252	0/0:28,0:28:81.23:0,81,980	1/1:2,30:32:81.27:1166,81,0	1/1:1,22:23:54.18:777,54,0	0/0:16,0:16:48.13:0,48,571	0/0:24,0:24:60.18:0,60,742	0/0:42,0:42:99:0,105,1275	1/1:2,24:26:54.14:770,54,0	1/1:2,16:18:45.15:645,45,0	1/1:1,30:31:90.30:1296,90,0	1/1:0,17:17:47.90:655,48,0	0/0:14,0:14:39.12:0,39,483	0/0:26,0:26:75.24:0,75,927	0/0:15,0:15:36.11:0,36,446
chr10	72305926	.	T	TATAG	2625.17	PASS	AB=0.900;AC=35;AF=0.729;AN=48;BaseQRankSum=-2.852;DP=569;FS=0.000;HRun=0;HaplotypeScore=175.2750;InbreedingCoeff=0.2604;MQ=59.60;MQ0=6;MQRankSum=1.150;QD=6.18;ReadPosRankSum=0.783;VQSLOD=2.4495;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:8.25:0,8,43	1/1:5,0:10:6.02:119,6,0	./.	./.	0/1:13,0:18:0:1,0,0	./.	1/1:21,0:21:8.69:86,9,0	./.	1/1:8,0:14:6.02:104,6,0	1/1:26,0:26:8.96:87,9,0	0/1:12,0:12:0:0,0,0	1/1:32,0:32:6.86:48,7,0	0/1:20,0:20:0:0,0,0	1/1:24,0:24:3.46:25,3,0	1/1:15,0:15:6.02:102,6,0	1/1:16,0:21:5.94:104,6,0	0/1:24,0:24:0:0,0,0	1/1:13,0:13:3.19:23,3,0	1/1:20,7:26:21.07:410,21,0	0/1:14,3:17:30.24:257,0,30	1/1:18,12:30:18.06:416,18,0	1/1:18,0:18:0.47:1,0,0	0/0:17,0:17:0.44:0,0,1	0/0:25,0:25:2.58:0,3,20	0/1:28,0:28:18.99:41,0,19	0/1:11,11:22:9.19:550,0,9	1/1:13,7:22:9.03:173,9,0	1/1:11,0:11:12.04:196,12,0
chr10	72305981	.	A	ACCGACC	1413.03	PASS	AB=0.961;AC=13;AF=0.232;AN=56;BaseQRankSum=9.267;DP=488;FS=1.134;HRun=0;HaplotypeScore=248.6681;InbreedingCoeff=0.0877;MQ=55.87;MQ0=7;MQRankSum=-9.392;QD=6.14;ReadPosRankSum=-4.836;VQSLOD=1.4764;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:71.28:81,0,71	0/0:12,0:12:24.63:0,25,496	0/0:17,0:15:45.15:0,45,1011	0/0:14,0:12:36.03:0,36,764	0/0:15,0:15:21.07:0,21,538	0/0:14,0:14:22.80:0,23,586	0/0:15,0:15:25.30:0,25,602	0/1:32,0:26:56.39:56,0,430	0/0:7,0:7:9.87:0,10,137	0/1:17,1:18:99:392,0,163	1/1:8,0:8:3.01:66,3,0	0/1:34,0:34:13.56:284,0,14	0/1:15,0:15:61.92:62,0,128	0/0:10,0:10:13.01:0,13,265	0/0:10,0:10:18.06:0,18,403	0/0:17,0:17:26.62:0,27,589	0/1:9,0:11:88.12:125,0,88	0/1:9,0:9:76.60:169,0,77	0/0:24,0:21:60.07:0,60,1098	0/0:8,0:8:21:0,21,335	0/0:24,0:24:39.09:0,39,661	0/1:36,0:36:30.56:79,0,31	1/1:28,0:28:13.27:84,13,0	0/0:10,0:10:2.79:0,3,43	0/1:23,3:26:0.86:171,0,1	0/0:24,0:24:69.08:0,69,1224	0/0:20,0:20:45.04:0,45,865	0/0:17,0:16:48.16:0,48,1113
chr10	72305994	.	G	GACCA	3151.88	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=13.676;DP=474;FS=36.850;HRun=0;HaplotypeScore=226.6348;InbreedingCoeff=0.4159;MQ=65.76;MQ0=1;MQRankSum=-12.087;QD=12.81;ReadPosRankSum=-3.071;VQSLOD=1.6120;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:24.92:266,25,0	0/0:11,0:11:16.34:0,16,397	0/0:20,0:20:57.08:0,57,888	0/0:17,0:16:40.01:0,40,542	0/0:11,0:11:23.83:0,24,413	0/0:14,0:14:29.53:0,30,485	0/0:14,0:14:23.95:0,24,399	0/1:26,0:25:60:328,0,60	0/0:9,0:9:14.59:0,15,178	0/1:16,0:15:34.02:166,0,34	1/1:6,0:6:3.78:18,4,0	1/1:32,2:35:85.64:985,86,0	1/1:15,4:19:47:548,47,0	0/0:8,0:8:14.94:0,15,191	0/0:7,0:7:17.99:0,18,269	0/0:16,0:16:30.35:0,30,502	0/1:10,0:10:50.68:64,0,51	0/1:10,0:10:46.68:47,0,52	0/0:20,0:19:18.31:0,18,656	0/1:12,0:12:7.35:7,0,156	0/0:25,0:25:33.12:0,33,422	1/1:34,5:39:64.25:471,64,0	1/1:27,1:28:50.38:381,50,0	0/1:9,0:9:30.10:30,0,65	0/1:24,0:24:31.81:32,0,32	0/0:18,0:18:46.23:0,46,641	0/0:21,0:21:29.50:0,29,651	0/0:17,0:17:50.96:0,51,779
chr10	72306011	.	C	CTGGATTTGGT	26065.95	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=4.106;DP=489;FS=1.973;HRun=0;HaplotypeScore=186.6925;InbreedingCoeff=0.9929;MQ=74.13;MQ0=0;MQRankSum=-17.174;QD=126.53;ReadPosRankSum=-0.763;VQSLOD=5.1188;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,6:10:27.09:1240,27,0	0/0:11,0:11:26.81:0,27,826	0/0:17,0:18:53.96:0,54,1393	0/0:15,0:15:39.57:0,40,1163	0/0:17,0:17:51.16:0,51,1428	0/0:17,0:17:48.15:0,48,1560	0/0:20,0:20:54.18:0,54,1542	0/0:23,0:23:60.18:0,60,1676	0/0:9,0:9:24.08:0,24,800	1/1:8,13:21:57.16:2677,57,0	1/1:3,4:7:18.06:799,18,0	1/1:11,22:33:96.33:4803,96,0	1/1:12,12:25:72.25:3315,72,0	0/0:10,0:10:27.09:0,27,884	0/0:10,0:10:30.09:0,30,875	0/0:15,0:15:42.62:0,43,1402	1/1:8,6:14:39.04:1189,39,0	1/1:2,6:8:18.06:901,18,0	0/0:18,0:18:54.18:0,54,1671	0/0:20,0:20:51.17:0,51,1313	0/0:26,0:26:75.24:0,75,2269	1/1:7,27:34:96.29:4620,96,0	1/1:7,15:23:69.24:3056,69,0	1/1:4,3:7:12.51:384,13,0	1/1:11,13:24:72.25:3082,72,0	0/0:15,0:15:45.15:0,45,1398	0/0:20,0:20:51.17:0,51,1649	0/0:19,0:19:54.19:0,54,1802
chr10	72306108	.	TTG	T	34.33	PASS	AB=0.925;AC=5;AF=0.147;AN=34;BaseQRankSum=2.200;DP=313;FS=57.167;HRun=0;HaplotypeScore=65.7976;InbreedingCoeff=0.2032;MQ=37.05;MQ0=58;MQRankSum=0.060;QD=0.90;ReadPosRankSum=-0.156;VQSLOD=-0.6042;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:8,0:8:23.88:0,24,210	1/1:7,0:1:2.92:17,3,0	0/0:11,0:2:0.85:0,1,1	0/0:34,0:30:58.04:0,58,510	0/1:6,0:5:30.78:31,0,48	0/0:19,0:16:34.96:0,35,291	0/0:28,0:24:26.83:0,27,376	0/0:6,0:6:14.55:0,15,84	./.	./.	./.	./.	0/1:9,2:11:64.54:69,0,65	0/0:13,1:13:17.69:0,18,231	0/1:12,1:11:18.95:19,0,136	./.	./.	0/0:20,0:18:32.23:0,32,368	0/0:25,0:23:28.40:0,28,326	0/0:15,0:12:19.19:0,19,140	./.	./.	./.	./.	0/0:24,0:21:34.48:0,34,361	0/0:18,0:18:22.12:0,22,250	0/0:26,0:19:35.11:0,35,305
chr10	72306484	.	TTG	T	676.61	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=8.297;DP=616;FS=42.995;HRun=0;HaplotypeScore=75.6445;InbreedingCoeff=0.6632;MQ=64.73;MQ0=0;MQRankSum=-1.430;QD=19.33;ReadPosRankSum=0.060;VQSLOD=1.3299;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,7:28:73.88:769,74,0	0/0:9,0:9:27.09:0,27,531	0/1:7,0:7:10.92:11,0,178	0/0:7,0:7:20.04:0,20,251	0/0:24,0:24:66.20:0,66,1269	0/0:18,0:18:54.19:0,54,1097	0/0:36,0:36:99:0,108,2106	0/0:23,0:23:66.20:0,66,1205	0/0:19,0:19:57.20:0,57,1137	0/0:23,0:23:69.23:0,69,1368	0/0:14,0:14:42.13:0,42,795	0/0:28,0:28:84.29:0,84,1706	0/0:22,0:22:63.22:0,63,1274	0/0:24,0:24:69.24:0,69,1402	0/0:45,0:45:99:0,135,2708	0/0:29,0:29:87.30:0,87,1768	0/0:20,0:20:60.21:0,60,1219	0/0:20,0:20:60.19:0,60,1182	0/0:18,0:18:54.16:0,54,1025	0/0:14,0:14:42.14:0,42,851	0/0:51,0:51:99:0,150,2992	0/0:17,0:17:45.15:0,45,894	0/0:15,0:15:42.13:0,42,815	0/0:18,0:18:54.19:0,54,1071	0/0:15,0:15:39.12:0,39,739	0/0:27,0:27:81.25:0,81,1476	0/0:22,0:22:66.22:0,66,1272	0/0:23,0:23:69.24:0,69,1401
chr10	72306488	.	C	CCA	1279.51	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=8.019;DP=605;FS=21.073;HRun=0;HaplotypeScore=78.1514;InbreedingCoeff=0.4720;MQ=66.07;MQ0=0;MQRankSum=-1.146;QD=26.66;ReadPosRankSum=-2.150;VQSLOD=2.2806;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:24,8:33:95.68:1364,96,0	0/0:9,0:9:27.09:0,27,439	0/1:6,0:6:14.07:14,0,117	0/1:9,0:9:14.17:14,0,209	0/0:21,0:21:60.19:0,60,944	0/0:19,0:19:57.19:0,57,930	0/0:34,0:34:99:0,99,1564	0/0:25,0:25:72.23:0,72,1129	0/0:18,0:18:54.18:0,54,881	0/0:22,0:22:66.22:0,66,1054	0/0:13,0:13:33.07:0,33,459	0/0:29,0:29:87.30:0,87,1406	0/0:23,0:23:63.21:0,63,1027	0/0:24,0:24:69.24:0,69,1124	0/0:43,0:43:99:0,129,2104	0/0:32,0:32:96.31:0,96,1534	0/0:23,0:23:66.22:0,66,1067	0/0:21,0:21:63.22:0,63,1027	0/0:16,0:16:48.16:0,48,761	0/0:14,0:14:39.13:0,39,635	0/0:47,0:47:99:0,135,2169	0/0:16,0:16:45.15:0,45,727	0/0:12,0:12:33.11:0,33,527	0/0:17,0:17:51.13:0,51,803	0/0:13,0:13:33.11:0,33,538	0/0:25,0:25:69.23:0,69,1098	0/0:19,0:19:57.18:0,57,906	0/0:22,0:22:66.23:0,66,1072
chr10	72306668	.	A	AG	39.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.368;DP=564;FS=2.019;HRun=0;HaplotypeScore=94.4606;InbreedingCoeff=0.5775;MQ=63.97;MQ0=4;MQRankSum=-2.265;QD=1.72;ReadPosRankSum=1.716;VQSLOD=2.1170;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:57.84:0,58,284	0/0:6,0:6:13.29:0,13,164	0/0:29,0:11:24.33:0,24,201	0/0:21,0:7:1.49:0,1,34	0/0:35,0:35:85.93:0,86,973	0/0:13,0:13:35.83:0,36,376	0/0:9,0:9:24.07:0,24,306	0/0:30,0:30:71.55:0,72,643	0/0:10,0:10:26.98:0,27,282	0/0:23,0:23:25.40:0,25,195	0/0:23,1:24:5.63:0,6,64	0/0:20,0:20:47.97:0,48,308	0/0:18,0:18:30.76:0,31,222	0/0:15,0:15:23.37:0,23,234	0/0:15,0:15:37.19:0,37,381	0/0:27,0:27:70.37:0,70,754	0/0:22,1:23:11.80:0,12,101	1/1:14,9:23:4.98:119,5,0	0/0:25,0:25:65.34:0,65,611	0/0:17,0:16:36.78:0,37,331	0/0:11,0:11:22.36:0,22,218	0/0:19,0:19:42.97:0,43,259	0/0:19,0:19:37.93:0,38,248	0/0:17,0:17:24.83:0,25,164	0/0:17,0:17:18.90:0,19,81	0/0:29,0:29:80.25:0,80,801	0/0:15,0:15:39.04:0,39,462	0/0:10,0:10:21.02:0,21,216
chr10	72306669	.	A	AGAGAG	3933.56	PASS	AB=0.675;AC=15;AF=0.268;AN=56;BaseQRankSum=1.654;DP=579;FS=0.463;HRun=0;HaplotypeScore=130.0066;InbreedingCoeff=0.4117;MQ=64.95;MQ0=4;MQRankSum=-4.740;QD=16.88;ReadPosRankSum=4.065;VQSLOD=3.3215;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:45:37.89:0,38,303	0/0:6,0:6:15.04:0,15,288	0/0:29,0:11:13.42:0,13,289	0/1:22,0:8:25.55:46,0,26	0/0:35,0:35:82.74:0,83,1603	0/0:11,0:11:30.10:0,30,645	0/0:9,0:9:27.07:0,27,505	0/0:30,0:30:59.03:0,59,859	0/0:11,0:11:29.95:0,30,473	0/1:8,10:23:5.51:610,0,6	1/1:2,18:23:23.99:640,24,0	0/1:12,0:22:68.55:111,0,69	0/1:7,0:18:32.91:33,0,74	0/0:15,0:15:25.31:0,25,466	0/0:17,0:17:33.10:0,33,665	0/0:27,0:27:66.54:0,67,1260	1/1:2,13:26:26.89:622,27,0	1/1:7,8:24:33.16:747,33,0	0/0:26,0:26:51.81:0,52,776	0/0:16,0:15:35.51:0,36,623	0/0:11,0:11:25.60:0,26,363	0/1:6,0:19:4.19:270,0,4	0/1:8,0:20:62.78:102,0,63	0/1:6,0:19:40.77:133,0,41	1/1:1,12:17:20.95:619,21,0	0/0:28,0:28:73.91:0,74,1369	0/0:17,0:17:36.07:0,36,676	0/0:13,0:13:18.01:0,18,255
chr10	72308749	.	GCA	G	681.26	PASS	AB=0.895;AC=22;AF=0.440;AN=50;BaseQRankSum=3.884;DP=530;FS=1.675;HRun=0;HaplotypeScore=71.4348;InbreedingCoeff=0.0084;MQ=65.63;MQ0=14;MQRankSum=1.942;QD=2.50;ReadPosRankSum=1.606;VQSLOD=1.5558;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:26:2.84:14,3,0	0/1:7,3:10:19.94:20,0,117	./.	./.	0/0:16,1:16:6:0,6,68	0/0:17,0:17:21.03:0,21,263	0/1:13,0:15:4.69:5,0,136	0/0:23,0:22:1.25:0,1,3	0/1:11,1:13:13.92:14,0,201	0/0:17,0:14:0.81:0,1,30	0/0:15,0:14:3.01:0,3,39	1/1:11,6:17:12.03:128,12,0	1/1:10,0:13:5.79:33,6,0	0/1:17,0:18:10.49:10,0,126	0/1:21,3:23:45.93:46,0,136	0/1:19,3:23:51:51,0,226	0/1:11,1:18:20.09:20,0,84	0/0:13,0:20:14.53:0,15,120	1/1:13,0:12:3.01:32,3,0	0/1:10,1:12:8.11:8,0,37	0/0:31,0:31:26.56:0,27,322	1/1:12,0:12:2.98:23,3,0	./.	1/1:21,8:32:45.16:391,45,0	0/0:20,0:20:14.92:0,15,170	0/0:19,0:19:9.03:0,9,117	0/1:13,2:15:19.94:20,0,120	0/1:9,0:8:19.92:20,0,117
chr10	72308952	.	TC	T	1380.70	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.746;DP=662;FS=11.329;HRun=4;HaplotypeScore=64.6606;InbreedingCoeff=0.9958;MQ=71.85;MQ0=0;MQRankSum=-4.081;QD=27.07;ReadPosRankSum=1.812;VQSLOD=2.4742;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,49:51:99:1476,123,0	0/0:9,0:9:27.09:0,27,378	0/0:20,0:20:57.10:0,57,727	0/0:24,0:23:55.73:0,56,706	0/0:16,0:16:48.16:0,48,672	0/0:19,0:19:56.97:0,57,753	0/0:26,0:26:78.18:0,78,1051	0/0:21,0:21:60.19:0,60,825	0/0:17,0:17:48.16:0,48,672	0/0:22,0:22:63.16:0,63,859	0/0:13,0:13:39.13:0,39,546	0/0:38,0:38:99:0,102,1390	0/0:25,0:25:72.24:0,72,1005	0/0:23,0:23:69.16:0,69,925	0/0:32,0:32:93.28:0,93,1268	0/0:31,0:31:90.27:0,90,1225	0/0:35,0:35:99:0,99,1336	0/0:33,0:33:96.25:0,96,1284	0/0:27,0:27:75.22:0,75,1001	0/0:17,0:17:48.14:0,48,652	0/0:37,0:37:99:0,105,1409	0/0:16,0:16:45.15:0,45,629	0/0:10,0:10:27.09:0,27,377	0/0:40,0:40:99:0,117,1636	0/0:15,0:15:45.14:0,45,612	0/0:15,0:15:45.15:0,45,630	0/0:21,0:21:60.17:0,60,798	0/0:8,0:8:24.07:0,24,319
chr10	72309400	.	AAAAT	A	2741.20	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.639;DP=576;FS=0.000;HRun=0;HaplotypeScore=91.3644;InbreedingCoeff=0.9963;MQ=64.28;MQ0=1;MQRankSum=-2.339;QD=35.60;ReadPosRankSum=2.853;VQSLOD=3.1826;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.32:0,93,2364	0/0:16,0:16:39.13:0,39,970	0/0:15,0:14:33.07:0,33,765	0/0:17,0:15:35.37:0,35,828	0/0:28,0:28:81.27:0,81,2051	0/0:25,0:25:66.23:0,66,1714	0/0:19,0:19:51.11:0,51,1109	0/0:48,0:48:99:0,117,2890	0/0:17,0:17:42.14:0,42,1059	0/0:24,0:24:72.24:0,72,1789	0/0:15,0:15:39.13:0,39,942	1/1:3,13:16:30.10:539,30,0	1/1:0,18:18:36.12:634,36,0	0/0:21,0:21:57.18:0,57,1398	0/0:20,0:20:57.18:0,57,1400	0/0:17,0:17:51.16:0,51,1240	0/0:34,0:34:96.32:0,96,2393	0/0:18,0:18:45.15:0,45,1132	0/0:29,0:29:81.22:0,81,1892	0/0:19,0:19:48.16:0,48,1242	0/0:19,0:19:54.19:0,54,1373	1/1:2,16:16:42.09:722,42,0	1/1:2,14:16:39.13:700,39,0	1/1:1,8:9:16.13:321,16,0	0/0:19,0:19:57.20:0,57,1480	0/0:18,0:18:45.13:0,45,1036	0/0:20,0:20:54.19:0,54,1402	0/0:8,0:8:24.08:0,24,593
chr10	72310408	.	T	TA	3502.18	PASS	AB=0.931;AC=23;AF=0.411;AN=56;BaseQRankSum=2.641;DP=539;FS=1.640;HRun=11;HaplotypeScore=62.8748;InbreedingCoeff=0.7654;MQ=76.46;MQ0=1;MQRankSum=-0.368;QD=14.59;ReadPosRankSum=0.551;VQSLOD=4.1145;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:22:43.85:0,44,328	0/0:4,0:5:13.99:0,14,99	0/1:17,1:13:38.97:39,0,43	0/0:15,0:14:16:0,16,131	0/0:26,1:29:36.35:0,36,443	0/0:13,0:13:38.85:0,39,302	0/1:10,1:12:1.51:2,0,161	0/0:31,0:31:32.28:0,32,428	0/0:15,0:15:44.34:0,44,334	1/1:4,22:27:65.78:604,66,0	1/1:4,28:32:86.94:815,87,0	1/1:3,2:13:25.90:161,26,0	1/1:2,2:17:34.39:194,34,0	0/0:20,0:21:46.84:0,47,354	0/0:19,0:20:46.82:0,47,351	0/0:13,0:13:29.86:0,30,229	1/1:2,11:13:3.82:220,4,0	1/1:2,15:17:1.63:380,2,0	0/1:10,1:12:4.51:5,0,142	0/0:35,0:35:89.54:0,90,682	0/0:7,0:7:20.92:0,21,163	1/1:4,0:19:37.24:207,37,0	1/1:3,0:23:42.92:235,43,0	1/1:2,0:10:19.95:102,20,0	1/1:3,24:27:23.78:539,24,0	0/0:29,1:31:43.27:0,43,508	0/0:25,0:27:76.72:0,77,581	0/0:13,0:14:25.90:0,26,192
chr10	72311336	.	AGTGTGTGTGTGTGTGTGTGTGT	A	3419.17	PASS	AB=0.923;AC=13;AF=0.260;AN=50;BaseQRankSum=7.835;DP=696;FS=0.823;HRun=0;HaplotypeScore=359.6345;InbreedingCoeff=0.6984;MQ=62.03;MQ0=10;MQRankSum=-6.333;QD=20.60;ReadPosRankSum=1.725;VQSLOD=1.2339;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:30.10:0,30,1028	0/0:7,0:8:12.04:0,12,850	0/0:27,0:19:6.02:0,6,149	0/0:24,0:17:16.29:0,16,357	0/0:17,0:17:30.10:0,30,1781	0/0:23,0:25:30.10:0,30,1028	0/0:30,0:36:54.15:0,54,2421	0/0:24,0:24:21.06:0,21,538	0/0:27,0:27:54.64:0,55,3207	1/1:18,0:28:18.06:922,18,0	1/1:9,0:13:0.75:4,1,0	1/1:14,10:23:12.04:650,12,0	1/1:18,11:31:27.09:1394,27,0	0/0:28,1:30:51.18:0,51,3385	0/0:23,0:23:30.10:0,30,1515	0/0:33,0:33:57.15:0,57,3756	1/1:21,0:28:3.01:154,3,0	1/1:12,5:17:3.01:174,3,0	0/0:21,0:21:24.08:0,24,787	0/0:17,0:16:15.05:0,15,1125	0/0:53,0:50:90.31:0,90,5305	./.	./.	0/0:28,11:38:0:0,0,0	./.	0/1:22,0:24:99:121,0,3138	0/0:23,0:23:40.69:0,41,2633	0/0:5,0:5:9.03:0,9,447
chr10	72311744	.	C	CT	2217.95	PASS	AB=0.887;AC=16;AF=0.286;AN=56;BaseQRankSum=-4.592;DP=519;FS=1.444;HRun=11;HaplotypeScore=70.0633;InbreedingCoeff=0.5834;MQ=66.21;MQ0=4;MQRankSum=0.039;QD=10.71;ReadPosRankSum=0.423;VQSLOD=3.1312;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,21:27:44.60:534,45,0	0/0:10,0:11:19.96:0,20,145	0/0:12,1:13:20.42:0,20,145	0/1:19,1:17:8.37:8,0,99	0/1:15,5:21:40.97:41,0,217	0/0:15,1:17:0.76:0,1,183	0/0:13,0:17:36.93:0,37,265	0/0:26,1:30:27.91:0,28,352	0/0:12,0:13:33.95:0,34,244	1/1:6,9:15:25.25:231,25,0	1/1:4,15:19:6.75:229,7,0	0/0:10,0:10:25.93:0,26,191	0/0:13,0:13:23.85:0,24,181	0/0:14,0:16:30.93:0,31,221	0/0:9,0:10:13.96:0,14,99	0/0:18,0:19:34.84:0,35,259	1/1:8,24:34:62.07:638,62,0	1/1:8,22:30:53.94:532,54,0	0/0:22,0:22:2.77:0,3,198	0/0:16,0:14:26.83:0,27,206	0/0:21,1:26:28.62:0,29,362	0/0:17,0:18:31.02:0,31,232	0/0:18,0:18:35.84:0,36,279	0/0:21,0:21:38.84:0,39,302	1/1:4,7:10:17.87:167,18,0	0/1:19,2:21:13.10:13,0,275	0/0:20,0:20:41.74:0,42,320	0/1:6,1:7:12.51:13,0,98
chr10	72312186	.	ATCACTCACTAGTCCTCCAGT	A	2433.99	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.640;DP=656;FS=10.419;HRun=0;HaplotypeScore=322.2881;InbreedingCoeff=0.8656;MQ=81.39;MQ0=1;MQRankSum=-5.899;QD=28.98;ReadPosRankSum=0.198;VQSLOD=0.5932;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,117,9538	0/0:9,0:9:15.05:0,15,1011	0/0:33,0:31:9.03:0,9,163	0/0:27,0:26:7.24:0,7,114	0/0:15,0:15:30.09:0,30,2009	0/0:16,0:16:39.13:0,39,2810	0/0:32,0:32:69.22:0,69,4331	0/0:40,0:40:24.06:0,24,501	0/0:33,0:33:51.14:0,51,3743	0/0:17,0:17:27.09:0,27,2113	0/0:5,0:5:12.04:0,12,940	1/1:9,7:16:12.04:634,12,0	1/1:19,13:32:18.06:945,18,0	0/0:16,0:16:27.09:0,27,2121	0/0:43,0:43:78.25:0,78,6091	0/0:22,0:22:39.13:0,39,3098	0/0:28,0:28:51.18:0,51,3831	0/0:19,0:19:45.15:0,45,3447	0/0:30,0:29:33.10:0,33,2081	0/0:10,0:10:12.04:0,12,1115	0/0:41,0:41:66.18:0,66,4630	1/1:6,6:12:17.98:674,18,0	1/1:4,0:4:2.97:20,3,0	1/1:13,7:20:6.02:317,6,0	0/0:12,0:12:21.07:0,21,1453	0/0:18,0:18:15.04:0,15,895	0/0:25,0:24:54.19:0,54,4040	0/0:22,0:22:48.12:0,48,3231
chr10	72317451	.	GTGTGTGTGTGCGCGTGTGCA	G	852.55	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.103;DP=886;FS=1.554;HRun=0;HaplotypeScore=423.4036;InbreedingCoeff=0.9905;MQ=66.36;MQ0=2;MQRankSum=-4.180;QD=53.28;ReadPosRankSum=2.086;VQSLOD=0.9708;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,160,12633	0/0:15,0:15:45.15:0,45,3362	0/0:41,0:22:27.53:0,28,1095	0/0:40,0:23:54.12:0,54,2103	0/0:18,0:18:54.17:0,54,4062	0/0:16,0:16:42.14:0,42,3460	0/0:33,0:33:81.26:0,81,6414	0/0:30,0:30:66.23:0,66,5081	0/0:31,0:31:75.26:0,75,5984	0/0:33,0:32:84.28:0,84,7185	0/0:18,0:18:51.18:0,51,4183	0/0:31,0:31:81.28:0,81,6504	0/0:30,0:30:81.28:0,81,6849	0/0:36,0:36:93.32:0,93,7751	0/0:36,0:36:93.31:0,93,7247	0/0:22,0:22:54.19:0,54,4527	0/0:44,0:44:99:0,117,9519	1/1:5,11:16:18.06:943,18,0	0/0:24,0:24:51.18:0,51,4003	0/0:29,0:29:78.27:0,78,6062	0/0:91,0:91:99:0,241,19428	0/0:27,0:27:81.25:0,81,6185	0/0:18,0:18:42.14:0,42,3847	0/0:48,0:48:99:0,126,10334	0/0:25,0:25:69.24:0,69,5869	0/0:40,0:40:99:0,105,8609	0/0:24,0:24:69.24:0,69,5202	0/0:10,0:10:30.10:0,30,2181
chr10	72320473	.	CTG	C	75.23	PASS	AB=0.957;AC=11;AF=0.196;AN=56;BaseQRankSum=4.954;DP=754;FS=5.335;HRun=0;HaplotypeScore=130.5112;InbreedingCoeff=-0.0187;MQ=56.20;MQ0=15;MQRankSum=0.273;QD=0.33;ReadPosRankSum=-0.846;VQSLOD=2.1789;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:8.66:0,9,76	0/0:14,0:14:8.71:0,9,354	0/0:36,0:13:6.02:0,6,91	0/0:58,0:18:0.47:0,0,1	0/1:21,1:22:38.80:39,0,378	0/0:12,0:12:15.05:0,15,217	0/1:27,1:28:1.37:1,0,416	0/1:29,2:30:31.84:32,0,331	0/0:33,0:31:63.11:0,63,903	0/1:28,0:27:10.29:10,0,84	0/1:9,0:9:0:0,0,0	0/0:27,0:27:11.95:0,12,111	0/0:21,0:21:18.01:0,18,135	0/1:27,0:27:40.49:40,0,588	0/0:35,2:36:54.41:0,54,809	0/0:30,3:34:11.82:0,12,698	1/1:16,0:16:0.86:2,1,0	0/0:14,0:25:5.95:0,6,43	0/1:20,1:19:7.48:7,0,293	0/0:17,0:17:33.11:0,33,507	0/0:69,7:76:25.98:0,26,1656	0/0:26,0:26:8.99:0,9,74	0/0:13,0:13:0.17:0,0,1	0/0:23,0:22:8.17:0,8,70	0/0:17,0:17:3.18:0,3,26	0/1:22,2:24:21.43:21,0,561	0/0:23,0:23:39.13:0,39,592	0/1:17,2:21:43.19:43,0,546
chr10	72321041	.	CA	C	4811.43	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=12.828;DP=591;FS=8.532;HRun=10;HaplotypeScore=67.9663;InbreedingCoeff=0.8616;MQ=81.86;MQ0=0;MQRankSum=-1.171;QD=19.80;ReadPosRankSum=5.300;VQSLOD=5.3082;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:47.97:417,48,0	0/0:8,0:8:21.06:0,21,232	0/0:21,1:21:9.46:0,9,375	0/1:19,0:19:17.87:18,0,100	0/0:31,0:31:80.11:0,80,851	0/0:19,1:20:28.09:0,28,537	0/0:18,0:18:51.14:0,51,564	0/0:30,0:32:63:0,63,678	0/0:16,0:16:45.11:0,45,489	1/1:2,20:22:59.97:517,60,0	1/1:1,19:20:41.97:365,42,0	1/1:1,26:27:71.99:625,72,0	1/1:1,28:29:77.98:677,78,0	0/0:19,0:19:56.15:0,56,579	0/0:22,0:22:60.15:0,60,657	0/0:23,2:25:1.48:0,1,536	1/1:0,16:16:44.99:391,45,0	1/1:1,13:15:35.03:292,35,0	0/0:22,1:24:30.60:0,31,530	0/0:22,0:22:2.13:0,2,478	0/0:22,0:22:48.12:0,48,523	1/1:6,20:26:47.96:417,48,0	1/1:2,18:20:44.99:391,45,0	1/1:0,13:13:38.99:339,39,0	1/1:1,14:15:41.99:365,42,0	0/0:32,1:33:49.15:0,49,764	0/0:23,2:25:40.13:0,40,671	0/0:8,0:9:23.90:0,24,247
chr10	72321443	.	A	ACTG	622.80	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=-2.486;DP=512;FS=2.694;HRun=0;HaplotypeScore=81.8929;InbreedingCoeff=0.9928;MQ=49.18;MQ0=20;MQRankSum=0.187;QD=36.64;ReadPosRankSum=1.046;VQSLOD=4.4360;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:15:33.11:717,33,0	0/0:9,0:8:21.07:0,21,337	./.	./.	0/0:22,0:21:48.16:0,48,760	0/0:23,0:22:36.12:0,36,571	0/0:25,0:23:51.17:0,51,809	0/0:34,0:31:84.24:0,84,1291	0/0:16,0:16:36.10:0,36,553	0/0:18,0:18:48.16:0,48,756	0/0:25,0:25:69.23:0,69,1090	0/0:15,0:12:30.10:0,30,482	0/0:14,0:14:27.05:0,27,434	0/0:15,0:15:38.89:0,39,627	0/0:18,0:18:48.12:0,48,743	0/0:21,0:20:57.16:0,57,865	0/0:21,0:19:42.10:0,42,647	0/0:22,0:19:45.14:0,45,695	0/0:20,0:20:45.10:0,45,650	0/0:20,0:19:54.18:0,54,868	0/0:20,0:19:48.16:0,48,763	0/0:13,0:12:30.10:0,30,482	0/0:18,0:18:39.13:0,39,612	0/0:26,0:24:42.14:0,42,670	0/0:13,0:13:33.11:0,33,522	0/0:22,0:21:60.20:0,60,957	0/0:20,0:19:48.05:0,48,755	0/0:16,0:16:36.12:0,36,579
chr10	72321588	.	TA	T	3130.38	PASS	AB=0.944;AC=22;AF=0.393;AN=56;BaseQRankSum=15.013;DP=585;FS=6.078;HRun=12;HaplotypeScore=87.1941;InbreedingCoeff=0.8379;MQ=61.73;MQ0=2;MQRankSum=2.322;QD=13.38;ReadPosRankSum=2.099;VQSLOD=3.9680;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:41:93.10:0,93,978	0/0:6,0:7:20.86:0,21,190	0/1:15,0:9:5.29:5,0,96	0/0:10,1:6:1.84:0,2,23	0/0:24,2:26:22.66:0,23,588	0/0:18,1:19:26.46:0,26,456	0/0:13,0:13:24.04:0,24,237	0/0:39,2:42:51.20:0,51,849	0/0:18,0:18:48.07:0,48,474	1/1:10,17:28:62.62:445,63,0	1/1:3,18:21:56.77:439,57,0	1/1:1,10:12:31.92:238,32,0	1/1:4,17:22:52.73:400,53,0	0/0:15,0:15:36.07:0,36,365	0/1:21,3:24:9.61:10,0,446	0/0:20,0:19:45.08:0,45,452	1/1:0,19:19:53.79:418,54,0	1/1:4,0:19:30.98:89,31,0	0/0:23,0:23:45.07:0,45,446	0/0:23,1:24:36.55:0,37,517	0/0:14,0:15:35.89:0,36,343	1/1:3,10:13:35.22:258,35,0	1/1:8,8:17:31.82:230,32,0	1/1:0,14:15:37.90:284,38,0	1/1:5,22:27:68.69:530,69,0	0/0:30,1:32:57.44:0,57,710	0/0:21,2:23:10.63:0,11,459	0/0:22,0:22:51.10:0,51,518
chr10	72322283	.	T	TG	2315.99	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.852;DP=679;FS=1.097;HRun=2;HaplotypeScore=72.6526;InbreedingCoeff=0.9986;MQ=67.45;MQ0=0;MQRankSum=-1.142;QD=34.06;ReadPosRankSum=2.558;VQSLOD=4.0947;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,32:38:87.25:1229,87,0	0/0:16,0:16:48.11:0,48,578	0/0:21,0:21:54.16:0,54,669	0/0:25,0:24:63.16:0,63,750	0/0:43,0:43:99:0,111,1330	0/0:20,0:20:60.18:0,60,731	0/0:23,0:23:66.19:0,66,806	0/0:23,0:23:69.15:0,69,800	0/0:19,0:19:51.14:0,51,618	0/0:24,0:24:66.20:0,66,807	0/0:15,0:15:42.13:0,42,520	0/0:30,0:30:81.25:0,81,1004	0/0:23,0:23:66.18:0,66,792	0/0:20,0:20:57.18:0,57,706	0/0:36,0:36:99:0,108,1338	0/0:15,0:15:42.13:0,42,521	0/0:48,0:48:99:0,144,1713	1/1:1,29:29:84.28:1209,84,0	0/0:24,0:24:66.20:0,66,806	0/0:20,0:20:60.16:0,60,717	0/0:35,0:35:99:0,99,1182	0/0:15,0:15:36.11:0,36,446	0/0:9,0:8:24.08:0,24,297	0/0:25,0:25:75.24:0,75,929	0/0:19,0:19:54.17:0,54,669	0/0:20,0:20:60.19:0,60,744	0/0:33,0:33:96.29:0,96,1177	0/0:10,0:10:30.09:0,30,368
chr10	72323001	.	GC	G	3569.16	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.539;DP=611;FS=0.844;HRun=2;HaplotypeScore=68.3299;InbreedingCoeff=0.9936;MQ=67.78;MQ0=0;MQRankSum=0.240;QD=34.32;ReadPosRankSum=4.186;VQSLOD=3.9149;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1477	0/0:6,0:6:18.06:0,18,270	0/0:12,0:12:16.16:0,16,340	0/0:13,0:12:24.08:0,24,358	0/0:20,0:20:51.16:0,51,741	0/0:18,0:18:54.17:0,54,787	0/0:23,0:23:66.20:0,66,947	0/0:20,0:20:57.17:0,57,799	0/0:25,0:25:75.24:0,75,1104	0/0:23,0:23:69.23:0,69,1030	0/0:15,0:15:45.15:0,45,656	1/1:1,24:25:69.22:855,69,0	1/1:0,24:24:60.19:744,60,0	0/0:22,0:22:66.22:0,66,989	0/0:43,0:43:99:0,129,1913	0/0:23,0:23:69.23:0,69,1034	0/0:37,0:37:99:0,108,1614	0/0:26,0:26:78.26:0,78,1169	0/0:21,0:21:63.20:0,63,924	0/0:24,0:24:66.12:0,66,866	0/0:38,0:37:99:0,111,1539	1/1:0,15:15:45.14:558,45,0	1/1:0,13:13:33.10:409,33,0	1/1:0,27:27:81.25:1003,81,0	0/0:9,0:9:27.08:0,27,386	0/0:23,0:23:63.20:0,63,925	0/0:23,0:23:66.22:0,66,988	0/0:7,0:7:21.07:0,21,315
chr10	72323780	.	T	TC	2224.45	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.192;DP=443;FS=41.896;HRun=1;HaplotypeScore=98.2058;InbreedingCoeff=0.9656;MQ=53.68;MQ0=3;MQRankSum=-5.821;QD=25.28;ReadPosRankSum=2.837;VQSLOD=1.2380;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:9.96:0,10,152	0/0:8,0:8:15.05:0,15,194	0/0:25,0:14:33:0,33,400	0/0:28,0:16:41.72:0,42,408	0/0:17,0:16:30.08:0,30,375	0/0:10,0:10:21.07:0,21,273	0/0:15,0:15:33.09:0,33,414	0/0:17,0:16:33.08:0,33,401	0/0:10,0:10:21.05:0,21,259	0/0:10,0:10:30.07:0,30,373	0/0:18,0:18:51.17:0,51,662	1/1:5,14:19:38.68:582,39,0	1/1:3,23:26:60.09:888,60,0	0/0:8,0:8:18.06:0,18,234	0/0:14,0:14:36.12:0,36,467	0/0:15,0:15:42.14:0,42,544	0/0:16,0:16:27.09:0,27,349	0/0:10,0:10:24.04:0,24,292	0/0:13,0:13:39.12:0,39,499	0/0:22,0:21:45.15:0,45,584	0/0:19,0:19:45.15:0,45,584	1/1:2,11:13:14.52:223,15,0	1/1:1,8:9:11.17:218,11,0	1/1:5,16:21:38.96:484,39,0	0/0:9,0:9:18.06:0,18,234	0/0:14,0:14:39.13:0,39,507	0/0:16,0:16:39.11:0,39,491	0/0:24,0:24:54.18:0,54,700
chr10	72323794	.	A	ACAAC	3831.78	PASS	AB=0.609;AC=9;AF=0.161;AN=56;BaseQRankSum=10.722;DP=579;FS=5.320;HRun=0;HaplotypeScore=124.1636;InbreedingCoeff=0.8689;MQ=49.17;MQ0=10;MQRankSum=-8.270;QD=41.20;ReadPosRankSum=4.693;VQSLOD=3.8984;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:14.92:0,15,165	0/0:7,0:7:18.06:0,18,305	0/0:23,0:7:12.04:0,12,171	0/0:26,0:11:29.81:0,30,448	0/0:25,0:24:55.40:0,55,849	0/0:17,0:17:45.13:0,45,682	0/0:16,0:15:36.12:0,36,594	0/0:24,0:23:60.56:0,61,895	0/0:15,0:15:42.07:0,42,590	0/0:18,0:18:47.24:0,47,543	0/0:21,0:21:59.96:0,60,654	1/1:10,7:17:33.07:574,33,0	1/1:4,23:29:84.16:1654,84,0	0/0:16,0:13:39:0,39,554	0/0:23,0:21:36.10:0,36,579	0/0:26,0:26:75.06:0,75,1245	0/0:22,0:22:49.97:0,50,462	0/0:13,0:10:14.94:0,15,162	0/0:16,0:14:42.10:0,42,626	0/0:33,0:32:81.22:0,81,1211	0/0:17,0:17:44.84:0,45,678	1/1:1,12:14:31.99:612,32,0	0/1:5,6:14:8.39:419,0,8	1/1:6,11:19:35.39:573,35,0	0/0:15,0:15:31.78:0,32,326	0/0:26,0:24:72.10:0,72,1134	0/0:32,0:32:87.21:0,87,1326	0/0:31,0:31:78.26:0,78,1255
chr10	72323797	.	A	ACAAC	3822.21	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=11.340;DP=594;FS=5.212;HRun=0;HaplotypeScore=125.8253;InbreedingCoeff=0.8872;MQ=50.34;MQ0=12;MQRankSum=-8.185;QD=41.55;ReadPosRankSum=7.575;VQSLOD=3.4960;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:6.14:0,6,138	0/0:7,0:7:18.06:0,18,299	0/0:23,0:7:15.02:0,15,152	0/0:29,0:12:25:0,25,438	0/0:25,0:24:58.18:0,58,887	0/0:18,0:18:48.15:0,48,751	0/0:17,0:16:45.05:0,45,657	0/0:26,0:25:63.63:0,64,973	0/0:15,0:15:39.11:0,39,601	0/0:18,0:18:44.69:0,45,493	0/0:18,0:18:50.97:0,51,608	1/1:11,7:18:32.85:591,33,0	1/1:29,0:29:84.16:1667,84,0	0/0:17,0:14:42.10:0,42,609	0/0:23,0:21:36.09:0,36,554	0/0:27,0:27:78.06:0,78,1267	0/0:22,0:22:49.18:0,49,480	0/0:13,0:10:15.02:0,15,186	0/0:19,0:17:45.10:0,45,621	0/0:33,0:32:84.18:0,84,1202	0/0:16,0:16:43.93:0,44,727	1/1:15,0:15:38.49:645,38,0	0/1:14,0:14:2.18:405,0,2	1/1:16,0:16:29.79:514,30,0	0/0:15,0:15:31.86:0,32,427	0/0:29,0:26:66.22:0,66,1139	0/0:34,0:34:96.28:0,96,1511	0/0:31,0:31:78.23:0,78,1195
chr10	72323799	.	AAAAAAAC	A	38.67	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=3.214;DP=596;FS=16.029;HRun=0;HaplotypeScore=161.7871;InbreedingCoeff=0.3305;MQ=49.21;MQ0=12;MQRankSum=-1.488;QD=0.61;ReadPosRankSum=-1.070;VQSLOD=1.8423;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,22:25:9.48:118,9,0	0/0:7,0:7:18.06:0,18,349	0/0:22,0:5:11.87:0,12,88	0/0:29,0:12:22.73:0,23,588	0/0:25,0:24:57.11:0,57,1361	0/0:18,0:18:48.05:0,48,944	0/0:18,0:17:31.77:0,32,898	0/0:27,0:26:71.50:0,72,996	0/0:16,0:16:40.82:0,41,944	0/0:18,0:18:0.63:0,1,734	0/0:18,0:18:51.15:0,51,945	0/0:18,0:18:0.36:0,0,452	0/0:29,0:29:23.43:0,23,1601	0/0:17,0:14:42.11:0,42,1015	0/0:23,0:21:30.10:0,30,710	0/0:26,0:26:74.88:0,75,1975	0/1:23,0:23:13.95:14,0,641	0/1:13,0:10:4.61:5,0,245	0/0:19,0:17:47.79:0,48,939	0/0:32,0:31:77.10:0,77,1717	0/0:16,0:16:39.88:0,40,1055	0/0:15,0:15:38.44:0,38,635	0/0:14,0:14:19.44:0,19,387	0/0:17,0:17:29.88:0,30,528	0/0:15,0:15:21.21:0,21,382	0/0:30,0:27:75.14:0,75,1651	0/0:34,0:34:95.93:0,96,2361	0/0:30,0:30:70.65:0,71,1321
chr10	72324100	.	AAAAAGAAAC	A	1499.94	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-0.407;DP=559;FS=4.057;HRun=0;HaplotypeScore=158.1054;InbreedingCoeff=0.2878;MQ=50.97;MQ0=24;MQRankSum=-0.020;QD=6.85;ReadPosRankSum=-1.200;VQSLOD=2.4687;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:9.40:0,9,751	0/0:11,0:11:27.09:0,27,570	0/0:48,0:9:11.14:0,11,145	0/0:45,0:12:5.57:0,6,201	0/0:22,0:20:0.72:0,1,919	0/1:16,0:16:3.95:4,0,733	0/0:20,0:19:51.12:0,51,1282	0/1:28,0:28:18.42:18,0,1197	0/0:11,0:11:7.71:0,8,461	0/1:22,0:20:99:110,0,119	0/1:16,0:16:44.36:129,0,44	1/1:20,0:19:37.15:365,37,0	1/1:17,0:16:41.72:463,42,0	0/0:18,0:17:6.84:0,7,723	0/0:13,0:13:29.47:0,29,537	0/0:11,0:10:5.76:0,6,599	0/1:29,0:27:99:143,0,175	0/0:21,0:21:24.92:0,25,638	0/0:23,0:18:13.45:0,13,920	0/0:26,0:24:12.84:0,13,1175	0/0:12,0:11:19.35:0,19,487	1/1:8,0:7:6.01:64,6,0	1/1:12,0:11:25.27:260,25,0	1/1:2,11:12:1.25:3,1,0	0/1:18,0:18:99:105,0,178	0/0:28,0:27:30.50:0,31,1386	0/0:12,0:12:23.34:0,23,551	0/1:20,0:18:3.08:3,0,607
chr10	72324101	.	AAAAGAAAC	A	1764.80	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=1.006;DP=559;FS=0.869;HRun=0;HaplotypeScore=148.7743;InbreedingCoeff=0.1733;MQ=50.83;MQ0=24;MQRankSum=-1.128;QD=6.15;ReadPosRankSum=-2.532;VQSLOD=2.3193;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:8.16:0,8,628	0/0:11,0:11:26.84:0,27,521	0/0:49,0:10:8.19:0,8,122	0/1:44,0:12:11.30:11,0,176	0/1:22,0:20:13.14:13,0,831	0/1:17,0:17:34.01:34,0,671	0/0:20,0:19:38.95:0,39,1158	0/1:28,0:28:18.51:19,0,1057	0/0:11,0:11:7.02:0,7,397	0/1:23,0:21:36.04:187,0,36	0/1:16,0:16:12.86:196,0,13	1/1:20,0:19:36.49:335,36,0	1/1:16,0:15:41.65:438,42,0	0/0:18,0:17:6.83:0,7,636	0/0:12,0:12:19.59:0,20,442	0/0:11,0:10:5.35:0,5,533	0/1:29,0:27:83.61:202,0,84	0/0:21,0:21:12.93:0,13,504	0/0:22,0:17:11.46:0,11,799	0/0:26,0:24:12.45:0,12,1018	0/0:13,0:12:10.42:0,10,470	1/1:1,7:7:5.98:52,6,0	1/1:13,0:12:26.17:307,26,0	1/1:13,0:12:1.25:3,1,0	0/1:18,0:18:98.26:134,0,98	0/0:27,0:26:11.56:0,12,1230	0/0:12,0:12:21.63:0,22,488	0/1:20,0:18:7.16:7,0,533
chr10	72325232	.	GT	G	3600.80	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=11.996;DP=539;FS=0.000;HRun=10;HaplotypeScore=63.5279;InbreedingCoeff=0.9486;MQ=68.82;MQ0=3;MQRankSum=0.837;QD=18.37;ReadPosRankSum=2.539;VQSLOD=4.3228;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:17:30.40:340,30,0	0/0:4,0:4:9.02:0,9,99	0/0:26,1:17:17.24:0,17,290	0/0:19,0:15:12.03:0,12,184	0/0:22,1:23:34.11:0,34,604	0/0:30,0:30:72.18:0,72,789	0/0:12,0:12:30.08:0,30,332	0/0:38,2:40:67.17:0,67,915	0/0:10,1:11:1.14:0,1,239	1/1:3,20:23:59.94:509,60,0	1/1:5,17:23:22.84:400,23,0	1/1:2,13:15:32.98:287,33,0	1/1:2,10:12:23.99:208,24,0	0/0:11,0:11:27.07:0,27,299	0/0:21,1:22:31.09:0,31,564	0/0:27,0:27:71.97:0,72,754	1/1:2,25:27:65.98:573,66,0	1/1:1,0:25:44.81:132,45,0	0/0:19,0:18:41.58:0,42,429	0/0:19,0:21:50.92:0,51,524	0/0:7,0:7:21.03:0,21,216	1/1:2,4:6:14.99:129,15,0	1/1:2,16:19:41.02:345,41,0	1/1:1,7:8:18:156,18,0	1/1:1,20:21:59.99:521,60,0	0/0:25,0:25:66.15:0,66,709	0/0:26,0:26:72.18:0,72,787	0/0:19,0:19:45.10:0,45,480
chr10	72326506	.	G	GTGTTT	2379.57	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=-1.091;DP=562;FS=14.855;HRun=0;HaplotypeScore=93.5110;InbreedingCoeff=0.9017;MQ=31.98;MQ0=147;MQRankSum=-4.852;QD=24.79;ReadPosRankSum=-1.362;VQSLOD=2.1358;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:34:48.15:0,48,872	0/0:12,0:12:15.05:0,15,283	./.	./.	0/0:20,0:20:14.57:0,15,274	0/0:9,0:6:9.03:0,9,169	0/0:25,0:15:21.07:0,21,396	0/0:29,0:20:30.09:0,30,534	0/0:22,0:18:24.08:0,24,452	0/0:3,0:7:9.03:0,9,105	0/0:9,0:17:21.06:0,21,244	1/1:9,13:21:33.07:884,33,0	1/1:10,9:17:21.07:602,21,0	0/0:20,0:16:10.53:0,11,268	0/0:22,0:17:24.08:0,24,452	0/0:17,0:11:10.75:0,11,223	0/0:5,0:11:15.57:0,16,152	0/0:21,0:10:15.05:0,15,283	0/0:10,0:7:12.04:0,12,226	0/0:26,0:26:48.10:0,48,826	0/0:23,0:13:21.07:0,21,396	1/1:7,12:15:21.07:603,21,0	1/1:7,10:13:12.04:344,12,0	1/1:8,6:8:8.93:112,9,0	0/0:1,0:15:35.84:0,36,396	0/0:27,0:21:48.15:0,48,858	0/0:23,0:19:20.95:0,21,376	0/0:15,0:11:15.05:0,15,282
chr10	72328515	.	GGGA	G	2216.75	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=1.821;DP=269;FS=10.015;HRun=0;HaplotypeScore=42.8948;InbreedingCoeff=0.8612;MQ=87.98;MQ0=0;MQRankSum=-0.963;QD=18.47;ReadPosRankSum=-1.212;VQSLOD=1.7593;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:39.09:292,39,0	0/0:3,0:3:9.03:0,9,112	0/0:11,0:11:25.44:0,25,292	0/0:22,0:20:20.24:0,20,392	0/0:10,0:10:12.01:0,12,142	0/0:10,0:10:15.02:0,15,204	0/0:18,0:18:40.79:0,41,500	0/0:7,0:7:17.98:0,18,180	0/0:9,0:9:24.03:0,24,294	1/1:13,0:13:23.88:183,24,0	1/1:6,0:6:5.70:38,6,0	1/1:8,0:8:8.76:137,9,0	1/1:7,0:7:12.74:85,13,0	0/0:7,0:7:13.45:0,13,182	0/0:10,0:10:20.72:0,21,280	0/0:11,0:11:30.05:0,30,382	1/1:17,1:18:25.08:314,25,0	1/1:1,18:19:48.16:695,48,0	0/0:2,0:2:2.99:0,3,28	0/0:5,0:5:8.99:0,9,94	0/0:15,0:15:32.86:0,33,347	1/1:6,0:6:13.25:108,13,0	1/1:2,0:2:6:52,6,0	1/1:14,0:14:34.09:270,34,0	1/1:11,0:11:29.96:255,30,0	0/0:4,0:4:12.03:0,12,151	0/0:4,0:4:9.01:0,9,121	0/0:1,0:1:3.01:0,3,37
chr10	72328517	.	GA	G	2165.79	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=2.059;DP=270;FS=4.543;HRun=1;HaplotypeScore=33.9797;InbreedingCoeff=0.8069;MQ=86.90;MQ0=0;MQRankSum=-2.379;QD=16.66;ReadPosRankSum=-0.613;VQSLOD=3.4137;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,1:18:45.51:342,46,0	0/0:3,0:3:8.99:0,9,74	0/0:11,0:11:19.77:0,20,196	0/0:20,0:19:35.13:0,35,288	0/0:10,0:10:11.96:0,12,93	0/0:10,0:10:14.75:0,15,144	0/0:17,1:18:10.84:0,11,312	0/0:7,0:7:17.97:0,18,157	0/0:9,0:9:23.51:0,24,178	1/1:1,11:12:23.02:181,23,0	1/1:0,5:5:5.91:38,6,0	1/1:8,0:8:20.96:176,21,0	1/1:7,0:7:21:181,21,0	0/1:7,0:7:3.74:4,0,141	0/0:10,0:10:2.96:0,3,155	0/0:10,0:10:24.65:0,25,217	1/1:20,0:20:50.76:405,51,0	1/1:18,1:19:47.07:294,47,0	0/0:1,0:1:3:0,3,27	0/0:5,0:5:8.96:0,9,71	0/0:14,1:15:28.80:0,29,246	1/1:6,0:6:15:131,15,0	1/1:3,0:3:8.99:75,9,0	1/1:14,0:14:35.85:294,36,0	1/1:11,0:11:29.96:255,30,0	0/0:5,0:5:15.01:0,15,143	0/0:4,0:4:8.96:0,9,72	0/0:1,0:1:3:0,3,25
chr10	72331314	.	GGTGTGTGT	G	2448.79	PASS	AB=0.996;AC=14;AF=0.250;AN=56;BaseQRankSum=8.179;DP=686;FS=2.769;HRun=0;HaplotypeScore=174.4689;InbreedingCoeff=0.4274;MQ=63.31;MQ0=9;MQRankSum=-5.854;QD=10.46;ReadPosRankSum=-0.079;VQSLOD=2.5156;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:26:36.58:0,37,1147	0/0:15,0:16:29.74:0,30,735	0/0:30,0:17:17.14:0,17,186	0/0:32,0:18:15:0,15,153	0/0:18,0:18:23.59:0,24,416	0/0:16,0:17:36.08:0,36,1041	0/0:40,0:40:80.89:0,81,1983	0/0:37,0:37:67.93:0,68,1301	0/0:25,0:25:45.10:0,45,1164	1/1:8,13:21:42.04:755,42,0	1/1:10,2:14:21.07:445,21,0	0/1:15,0:15:8.16:245,0,8	0/1:17,0:17:27.75:98,0,28	0/0:27,0:27:57:0,57,1704	0/0:21,0:25:44.07:0,44,1397	0/0:25,0:28:66.19:0,66,2172	1/1:6,21:27:11.92:312,12,0	0/0:8,0:13:12.02:0,12,356	0/0:18,0:19:35.12:0,35,880	0/0:21,0:22:46.30:0,46,1237	0/0:51,0:51:99:0,111,3306	0/1:25,0:25:17.95:46,0,18	0/1:16,0:15:32.42:143,0,32	0/1:38,0:38:45.89:114,0,46	1/1:4,17:21:17.85:448,18,0	0/1:39,0:38:19.62:20,0,2362	0/0:18,0:18:30.08:0,30,800	0/0:7,0:7:15.05:0,15,291
chr10	72331327	.	GTGTGTGTGTGTGTA	G	1804.48	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=5.059;DP=688;FS=1.354;HRun=0;HaplotypeScore=230.4531;InbreedingCoeff=0.5936;MQ=54.62;MQ0=15;MQRankSum=-3.296;QD=8.43;ReadPosRankSum=0.374;VQSLOD=2.6468;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:13.15:0,13,1674	0/0:14,0:14:23.62:0,24,1170	0/0:35,0:13:12.04:0,12,435	0/1:36,0:12:0.83:1,0,25	0/0:15,0:15:33.11:0,33,1355	0/0:19,0:18:36.11:0,36,1918	0/0:36,0:36:72.70:0,73,3429	0/0:34,0:33:63.82:0,64,2428	0/0:23,0:23:50.99:0,51,2314	0/1:25,0:24:8.28:8,0,580	0/1:17,0:17:17.56:18,0,633	1/1:9,4:13:33:728,33,0	1/1:11,2:13:23.99:406,24,0	0/0:22,0:22:46.91:0,47,2754	0/0:25,0:25:48.87:0,49,2586	0/0:34,0:34:85.06:0,85,4111	0/0:29,0:28:21.03:0,21,419	0/0:11,0:11:14.78:0,15,611	0/0:22,0:21:25.66:0,26,1898	0/0:21,0:21:33.39:0,33,2454	0/0:63,0:63:99:0,146,6784	1/1:3,20:23:2.83:121,3,0	1/1:5,10:14:9.97:343,10,0	1/1:7,32:39:9.03:337,9,0	0/0:22,0:22:21.03:0,21,275	0/1:33,0:32:10.59:11,0,4251	0/0:16,0:16:33.96:0,34,1492	0/0:7,0:7:18.04:0,18,652
chr10	72331341	.	A	ATG	194.43	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.393;DP=685;FS=5.560;HRun=0;HaplotypeScore=116.9189;InbreedingCoeff=0.5457;MQ=53.11;MQ0=13;MQRankSum=1.342;QD=6.08;ReadPosRankSum=2.404;VQSLOD=3.0103;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,18:32:19.88:286,20,0	0/0:9,0:12:23.74:0,24,240	0/0:33,0:10:17.66:0,18,138	0/0:32,0:8:16.58:0,17,163	0/0:14,0:14:24.07:0,24,283	0/0:21,0:20:38.70:0,39,432	0/0:29,0:33:44.33:0,44,489	0/0:33,0:32:44.81:0,45,497	0/0:24,0:24:47.98:0,48,546	0/0:21,0:20:39.11:0,39,444	0/0:20,0:21:41.16:0,41,434	0/0:19,0:19:15.73:0,16,72	0/0:12,0:12:6.84:0,7,26	0/0:19,0:22:32.85:0,33,357	0/0:27,0:26:54.10:0,54,590	0/0:32,0:32:60.15:0,60,699	0/0:32,0:32:33.04:0,33,355	0/0:14,0:14:2.60:0,3,93	0/0:23,0:22:36.09:0,36,415	0/0:21,0:21:48.13:0,48,546	0/0:62,0:62:99:0,99,1150	0/0:22,0:22:2.78:0,3,13	0/0:11,0:11:8.32:0,8,41	0/0:33,0:33:5.64:0,6,27	0/0:23,0:23:15.94:0,16,146	0/0:31,0:31:63:0,63,697	0/0:15,0:16:29.60:0,30,332	0/0:7,0:7:6:0,6,59
chr10	72338617	.	A	AGT	16050.33	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-8.541;DP=791;FS=13.108;HRun=0;HaplotypeScore=92.1530;InbreedingCoeff=0.9998;MQ=86.90;MQ0=0;MQRankSum=-1.101;QD=48.93;ReadPosRankSum=3.769;VQSLOD=5.0625;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,49:51:99:2420,132,0	0/0:16,0:16:45.15:0,45,644	0/0:30,0:30:61.92:0,62,1079	0/0:23,0:23:57.16:0,57,795	0/0:39,0:39:99:0,111,1586	0/0:23,0:23:63.21:0,63,902	0/0:22,0:22:66.19:0,66,925	0/0:34,0:34:90.30:0,90,1289	0/0:22,0:22:63.20:0,63,885	1/1:0,27:29:84.27:1508,84,0	1/1:1,15:16:45.15:825,45,0	1/1:1,38:39:99:1870,102,0	1/1:1,30:32:84.29:1539,84,0	0/0:26,0:26:78.26:0,78,1113	0/0:40,0:40:99:0,120,1700	0/0:31,0:31:78.26:0,78,1117	1/1:0,33:33:99:1801,99,0	1/1:2,24:26:69.24:1261,69,0	0/0:22,0:22:63.21:0,63,902	0/0:26,0:26:69.22:0,69,971	0/0:34,0:34:99:0,99,1392	1/1:2,29:32:78.27:1430,78,0	1/1:3,10:13:27.09:495,27,0	1/1:1,23:24:66.23:1210,66,0	1/1:1,31:33:93.32:1691,93,0	0/0:31,1:32:38.28:0,38,1219	0/0:29,0:29:84.27:0,84,1186	0/0:14,0:14:42.14:0,42,600
chr10	72341025	.	CCT	C	294.09	PASS	AB=0.796;AC=2;AF=0.036;AN=56;BaseQRankSum=5.943;DP=765;FS=10.767;HRun=0;HaplotypeScore=94.3557;InbreedingCoeff=-0.0446;MQ=78.94;MQ0=0;MQRankSum=5.917;QD=8.65;ReadPosRankSum=-3.625;VQSLOD=1.5127;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1945	0/0:12,0:12:36.12:0,36,730	0/1:12,6:18:99:241,0,493	0/1:13,3:16:99:142,0,405	0/0:5,0:5:15.05:0,15,285	0/0:14,0:14:36.11:0,36,693	0/0:34,0:34:99:0,102,2039	0/0:34,0:34:99:0,99,1870	0/0:44,0:44:99:0,129,2547	0/0:19,0:19:54.17:0,54,992	0/0:8,0:8:21.07:0,21,422	0/0:48,0:48:99:0,144,2922	0/0:30,0:30:90.30:0,90,1760	0/0:45,0:45:99:0,135,2687	0/0:33,0:33:99:0,99,1938	0/0:28,0:28:84.28:0,84,1671	0/0:31,0:31:93.32:0,93,1830	0/0:35,0:35:99:0,105,2089	0/0:26,0:26:78.27:0,78,1550	0/0:10,0:10:24.08:0,24,487	0/0:89,0:89:99:0,265,5151	0/0:16,0:16:45.15:0,45,890	0/0:8,0:8:18.06:0,18,364	0/0:54,0:54:99:0,163,3215	0/0:15,0:15:42.13:0,42,792	0/0:23,0:23:66.70:0,67,1327	0/0:34,0:34:99:0,102,2043	0/0:1,0:1:3.01:0,3,61
chr10	72343374	.	GC	G	2562.41	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.316;DP=639;FS=0.000;HRun=2;HaplotypeScore=60.8165;InbreedingCoeff=0.9987;MQ=85.51;MQ0=0;MQRankSum=-3.495;QD=36.61;ReadPosRankSum=2.119;VQSLOD=4.1725;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,53:53:99:2064,160,0	0/0:13,0:13:36.11:0,36,518	0/0:17,0:17:51.17:0,51,765	0/0:24,0:24:69.23:0,69,1014	0/0:20,0:20:57.19:0,57,846	0/0:24,0:24:72.23:0,72,1055	0/0:24,0:24:69.22:0,69,1015	0/0:30,0:30:87.29:0,87,1299	0/0:21,0:21:63.21:0,63,939	0/0:19,0:19:57.19:0,57,834	0/0:20,0:20:60.20:0,60,893	0/0:31,0:31:93.28:0,93,1352	0/0:22,0:22:66.22:0,66,988	0/0:24,0:24:72.24:0,72,1079	0/0:25,0:25:72.24:0,72,1079	0/0:29,0:29:87.28:0,87,1273	0/0:19,0:19:54.18:0,54,809	1/1:0,17:17:48.16:620,48,0	0/0:20,0:20:60.19:0,60,879	0/0:17,0:17:48.14:0,48,679	0/0:26,0:26:78.26:0,78,1169	0/0:18,0:18:51.17:0,51,758	0/0:14,0:14:42.14:0,42,629	0/0:27,0:27:81.26:0,81,1193	0/0:14,0:14:33.11:0,33,495	0/0:27,0:27:81.26:0,81,1177	0/0:36,0:36:99:0,108,1596	0/0:8,0:8:24.03:0,24,298
chr10	72344249	.	CACAGATAGATAGATAGATAGATAG	C	1445.86	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=4.042;DP=537;FS=1.146;HRun=0;HaplotypeScore=307.5325;InbreedingCoeff=0.7244;MQ=57.99;MQ0=3;MQRankSum=-4.405;QD=19.81;ReadPosRankSum=0.772;VQSLOD=1.8414;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:42.51:0,43,1401	0/0:16,0:16:48.13:0,48,3607	0/0:10,0:5:12.02:0,12,189	0/1:8,0:4:18.68:19,0,22	0/0:20,0:20:60.12:0,60,4114	0/0:14,0:14:42.08:0,42,2707	0/0:16,0:16:45.07:0,45,2102	0/0:47,0:45:99:0,135,3444	0/0:17,0:16:48.12:0,48,2676	0/0:22,0:22:66.12:0,66,1734	0/0:22,0:22:36.97:0,37,675	1/1:1,17:18:9.03:568,9,0	1/1:1,21:22:14.87:692,15,0	0/0:10,0:10:30.06:0,30,1634	0/0:16,0:16:48.05:0,48,2587	0/0:18,0:18:51.14:0,51,3397	0/0:24,0:24:21.49:0,21,407	0/0:13,0:13:26.85:0,27,555	0/0:18,0:18:53.45:0,53,1937	0/0:28,0:28:84.13:0,84,4035	0/0:26,0:26:78.16:0,78,6368	./.	1/1:0,19:19:3.01:197,3,0	1/1:6,0:6:1.96:109,2,0	0/0:18,0:18:26.98:0,27,291	0/0:24,0:24:72.08:0,72,4518	0/0:29,0:29:87.09:0,87,4766	0/0:24,0:24:72.12:0,72,4131
chr10	72346554	.	A	AT	3111.88	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=6.404;DP=509;FS=0.925;HRun=7;HaplotypeScore=62.2506;InbreedingCoeff=0.9696;MQ=77.45;MQ0=2;MQRankSum=-1.159;QD=23.05;ReadPosRankSum=1.750;VQSLOD=3.7681;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:54.17:652,54,0	0/0:7,0:7:18:0,18,163	0/0:31,0:19:4.14:0,4,185	0/0:21,0:16:20.97:0,21,209	0/0:24,0:24:69.11:0,69,666	0/0:16,0:16:42.04:0,42,395	0/0:16,0:15:39.05:0,39,372	0/0:18,0:18:36.05:0,36,348	0/0:19,0:19:42.03:0,42,393	0/0:22,0:23:47.08:0,47,434	0/0:16,0:16:42:0,42,386	1/1:2,20:23:45.14:537,45,0	1/1:3,15:18:33.08:377,33,0	0/0:20,0:20:53.87:0,54,491	0/0:19,0:19:48.01:0,48,459	0/0:20,0:20:54.06:0,54,512	0/0:23,0:23:57:0,57,519	1/1:3,7:10:18.06:217,18,0	0/0:12,0:12:24.01:0,24,221	0/0:16,0:16:39.03:0,39,372	0/0:17,0:17:45.06:0,45,429	1/1:1,17:18:39.03:431,39,0	1/1:3,14:18:42.11:488,42,0	1/1:0,22:23:51.16:607,51,0	0/0:13,0:13:36.03:0,36,338	0/0:14,0:14:35.26:0,35,321	0/0:17,0:17:45.02:0,45,416	0/0:11,0:11:33.05:0,33,318
chr10	72349654	.	AAAC	A	3938.17	PASS	AC=22;AF=0.407;AN=54;BaseQRankSum=13.972;DP=665;FS=2.345;HRun=0;HaplotypeScore=122.3044;InbreedingCoeff=0.9552;MQ=56.28;MQ0=7;MQRankSum=-6.395;QD=14.81;ReadPosRankSum=1.311;VQSLOD=3.7021;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:26:16.86:133,17,0	0/0:21,0:21:45.15:0,45,864	./.	0/0:21,0:17:3.01:0,3,38	0/0:31,0:31:78.22:0,78,1330	0/0:19,0:19:39.13:0,39,764	0/0:14,0:14:15.05:0,15,273	0/0:40,0:37:30.10:0,30,537	0/0:25,0:25:45.15:0,45,865	1/1:25,0:25:53.69:351,54,0	1/1:36,0:36:65.04:446,65,0	1/1:5,14:18:33.11:448,33,0	1/1:6,14:20:42.14:570,42,0	0/0:15,0:15:24.08:0,24,446	0/0:24,0:24:66.23:0,66,1259	0/0:23,0:23:10.41:0,10,867	1/1:25,1:26:35.78:291,36,0	1/1:13,0:13:9.80:63,10,0	0/0:21,0:20:24:0,24,371	0/0:31,1:32:25.39:0,25,1113	0/0:25,0:25:48.16:0,48,893	1/1:7,13:20:30.07:388,30,0	1/1:9,20:28:35.86:488,36,0	1/1:11,20:31:42.14:571,42,0	1/1:19,0:19:26.78:188,27,0	0/0:36,0:36:84.25:0,84,1567	0/0:28,0:27:42.14:0,42,806	0/0:8,0:9:20.56:0,21,342
chr10	72349674	.	AC	A	154.95	PASS	AB=0.893;AC=3;AF=0.054;AN=56;BaseQRankSum=7.169;DP=690;FS=6.375;HRun=1;HaplotypeScore=118.2244;InbreedingCoeff=0.4381;MQ=54.81;MQ0=7;MQRankSum=-5.229;QD=3.78;ReadPosRankSum=0.282;VQSLOD=0.0562;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,2:25:19.87:129,0,20	0/0:19,0:19:57.19:0,57,890	0/0:19,1:11:30.10:0,30,432	0/0:18,0:11:30.04:0,30,389	0/0:38,0:38:99:0,114,1758	0/0:17,0:17:51.17:0,51,794	0/0:12,0:12:36.10:0,36,525	0/0:38,0:36:99:0,108,1567	0/0:23,0:23:69.23:0,69,1065	0/0:29,0:28:67.68:0,68,490	0/0:39,0:39:90.42:0,90,668	0/0:19,0:18:25.75:0,26,207	0/0:20,0:20:29.79:0,30,218	0/0:12,0:12:36.11:0,36,533	0/0:31,0:31:93.32:0,93,1441	0/0:23,0:23:67.46:0,67,1009	0/0:28,0:28:43.92:0,44,325	1/1:14,2:16:1.94:117,2,0	0/0:21,0:19:57.18:0,57,841	0/0:37,0:37:99:0,107,1583	0/0:21,0:21:60.67:0,61,932	0/0:23,0:23:47.33:0,47,537	0/0:35,0:34:60.41:0,60,659	0/0:30,0:30:47.52:0,48,453	0/0:22,0:22:32.48:0,32,232	0/0:36,0:36:99:0,108,1687	0/0:26,0:25:78.26:0,78,1184	0/0:11,0:12:13.78:0,14,438
chr10	72349677	.	AC	A	505.48	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.824;DP=701;FS=5.249;HRun=1;HaplotypeScore=120.3826;InbreedingCoeff=0.9855;MQ=56.35;MQ0=7;MQRankSum=-7.034;QD=11.49;ReadPosRankSum=-2.279;VQSLOD=1.2086;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,7:27:28:395,28,0	0/0:19,0:19:57.19:0,57,889	0/0:21,0:13:29.15:0,29,441	0/0:16,0:9:27.01:0,27,317	0/0:40,0:40:99:0,117,1761	0/0:17,0:17:51.17:0,51,794	0/0:11,0:11:33.11:0,33,494	0/0:39,0:37:99:0,111,1580	0/0:23,0:23:69.22:0,69,1046	0/0:28,0:27:62.46:0,62,457	0/0:38,0:38:85.63:0,86,577	0/0:20,0:19:28.74:0,29,233	0/0:20,0:20:29.79:0,30,218	0/0:10,0:10:30.10:0,30,469	0/0:30,0:30:90.31:0,90,1401	0/0:23,0:23:67.47:0,67,1024	0/0:32,0:32:37.69:0,38,230	1/1:14,1:17:23.27:232,23,0	0/0:23,0:21:63.15:0,63,886	0/0:41,0:41:99:0,119,1698	0/0:20,0:20:57.67:0,58,896	0/0:24,0:24:50.31:0,50,547	0/0:36,0:35:57.28:0,57,582	0/0:31,0:31:47.52:0,48,455	0/0:21,0:21:29.31:0,29,178	0/0:36,0:36:99:0,108,1657	0/0:25,0:24:75.25:0,75,1135	0/0:11,0:12:13.86:0,14,478
chr10	72349680	.	ACAACAAC	A	7068.26	PASS	AB=0.533;AC=11;AF=0.196;AN=56;BaseQRankSum=13.402;DP=698;FS=0.367;HRun=0;HaplotypeScore=174.9625;InbreedingCoeff=0.8858;MQ=59.05;MQ0=6;MQRankSum=-10.475;QD=42.32;ReadPosRankSum=0.318;VQSLOD=4.6361;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:32:70.13:1094,70,0	0/0:18,0:18:54.19:0,54,1987	0/0:24,0:15:42.13:0,42,595	0/0:15,0:8:24.07:0,24,375	0/0:38,0:38:99:0,114,3550	0/0:19,0:19:57.18:0,57,1859	0/0:11,0:11:30.10:0,30,812	0/0:36,0:34:99:0,102,2402	0/0:22,0:22:66.19:0,66,2187	1/1:1,28:28:81.20:1848,81,0	1/1:0,37:37:99:2216,99,0	0/0:20,0:19:48.16:0,48,687	0/0:22,0:22:60.20:0,60,861	0/0:10,0:10:30.10:0,30,1034	0/0:31,0:31:93.32:0,93,3208	0/0:22,0:22:66.22:0,66,2229	0/1:4,28:32:55.93:798,0,56	1/1:16,0:17:29.59:359,30,0	0/0:24,0:23:69.20:0,69,1549	0/0:38,0:38:99:0,114,3244	0/0:20,0:20:57.65:0,58,1979	0/0:22,0:22:46.72:0,47,882	0/0:35,0:34:75.25:0,75,1062	0/0:31,0:31:75.25:0,75,1160	1/1:0,20:20:27.09:753,27,0	0/0:36,0:36:99:0,108,3741	0/0:25,0:24:75.22:0,75,2217	0/0:11,0:12:35.83:0,36,943
chr10	72349961	.	T	TACC	16136.78	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-15.126;DP=668;FS=30.817;HRun=0;HaplotypeScore=88.5876;InbreedingCoeff=0.9999;MQ=84.62;MQ0=0;MQRankSum=-4.720;QD=59.55;ReadPosRankSum=5.030;VQSLOD=3.6236;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,35:43:99:2561,111,0	0/0:14,0:14:42.10:0,42,682	0/0:28,0:28:72.24:0,72,1200	0/0:19,0:19:54.32:0,54,887	0/0:22,0:22:66.23:0,66,1150	0/0:19,0:19:57.20:0,57,997	0/0:20,0:20:60.19:0,60,1019	0/0:43,0:43:99:0,120,2080	0/0:18,0:18:54.19:0,54,953	1/1:1,19:21:60.21:1395,60,0	1/1:0,16:16:45.15:1051,45,0	1/1:0,27:27:72.25:1702,72,0	1/1:1,17:18:51.17:1205,51,0	0/0:30,0:30:90.31:0,90,1588	0/0:26,0:26:78.25:0,78,1348	0/0:24,0:24:69.22:0,69,1190	1/1:0,36:36:93.32:2198,93,0	1/1:0,20:21:57.20:1348,57,0	0/0:14,0:14:39.12:0,39,634	0/0:26,0:26:78.27:0,78,1369	0/0:26,0:26:75.24:0,75,1294	1/1:1,17:20:45.15:1061,45,0	1/1:5,16:21:51.13:1141,51,0	1/1:1,23:25:51.18:1206,51,0	1/1:0,20:22:54.19:1270,54,0	0/0:23,0:23:66.23:0,66,1158	0/0:34,0:34:99:0,102,1766	0/0:11,0:11:33.11:0,33,582
chr10	72350210	.	TG	T	6407.52	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.668;DP=640;FS=2.893;HRun=1;HaplotypeScore=61.5703;InbreedingCoeff=0.9993;MQ=70.11;MQ0=0;MQRankSum=-2.126;QD=40.05;ReadPosRankSum=1.907;VQSLOD=5.5918;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:99:1636,117,0	0/0:8,0:8:24.05:0,24,358	0/0:20,0:20:60.20:0,60,960	0/0:15,0:15:45.10:0,45,657	0/0:22,0:22:66.21:0,66,1023	0/0:25,0:25:75.22:0,75,1150	0/0:24,0:24:72.22:0,72,1126	0/0:30,0:30:84.28:0,84,1322	0/0:29,0:29:87.27:0,87,1339	1/1:0,26:26:78.26:1091,78,0	1/1:0,9:9:27.09:377,27,0	0/0:20,0:20:60.20:0,60,959	0/0:19,0:19:57.19:0,57,911	0/0:30,0:30:90.31:0,90,1437	0/0:26,0:26:78.27:0,78,1240	0/0:18,0:18:54.18:0,54,863	1/1:0,29:29:78.26:1091,78,0	1/1:0,33:33:90.30:1248,90,0	0/0:21,0:21:63.21:0,63,986	0/0:21,0:21:63.21:0,63,1007	0/0:30,0:30:90.29:0,90,1411	0/0:12,0:12:36.12:0,36,575	0/0:15,0:15:42.14:0,42,669	0/0:21,0:21:60.20:0,60,959	1/1:0,24:24:69.23:965,69,0	0/0:25,1:26:36.29:0,36,1156	0/0:34,0:34:99:0,102,1625	0/0:14,0:14:42.14:0,42,671
chr10	72351437	.	CGG	C	217.60	PASS	AB=0.706;AC=3;AF=0.058;AN=52;BaseQRankSum=5.072;DP=338;FS=0.000;HRun=2;HaplotypeScore=53.5213;InbreedingCoeff=0.4658;MQ=39.08;MQ0=8;MQRankSum=-2.899;QD=7.50;ReadPosRankSum=1.432;VQSLOD=0.2882;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:9:9.03:116,9,0	0/0:7,0:7:15:0,15,216	./.	./.	0/0:15,0:12:18.06:0,18,328	0/0:17,0:17:48.12:0,48,873	0/0:11,0:11:33.11:0,33,612	0/0:22,0:19:57.19:0,57,1033	0/0:12,0:12:27.56:0,28,494	0/0:13,0:11:33.11:0,33,602	0/0:5,0:4:9.03:0,9,141	0/0:17,0:16:45.14:0,45,818	0/0:14,0:12:36.06:0,36,627	0/0:18,0:16:48.16:0,48,879	0/0:11,0:9:24.08:0,24,441	0/0:12,0:12:26.99:0,27,463	0/0:14,0:13:26.81:0,27,538	0/1:7,5:10:72.20:198,0,72	0/0:9,0:9:24.08:0,24,482	0/0:12,0:10:21.06:0,21,381	0/0:9,0:8:24.08:0,24,429	0/0:19,0:13:23.73:0,24,456	0/0:9,0:4:3.01:0,3,60	0/0:12,0:11:27.52:0,28,480	0/0:15,0:12:18.06:0,18,344	0/0:14,0:13:39.13:0,39,754	0/0:13,0:10:30.09:0,30,560	0/0:7,0:6:9.02:0,9,182
chr10	72351469	.	AAAAAAAC	A	521.09	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=4.720;DP=438;FS=5.464;HRun=0;HaplotypeScore=99.8854;InbreedingCoeff=0.7459;MQ=55.19;MQ0=7;MQRankSum=1.749;QD=7.24;ReadPosRankSum=0.706;VQSLOD=1.7434;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:35.30:0,35,275	0/0:13,0:12:33.07:0,33,740	0/0:20,0:7:10.40:0,10,127	0/0:16,0:12:23.31:0,23,266	0/0:19,0:12:27.95:0,28,629	0/0:14,0:13:38.92:0,39,591	0/0:18,0:17:44.99:0,45,778	0/0:23,0:18:42.41:0,42,560	0/0:11,0:11:27.03:0,27,448	0/0:5,0:3:3.88:0,4,26	0/0:1,0:1:2.96:0,3,19	0/1:22,0:20:56.47:179,0,56	1/1:20,0:14:20.86:231,21,0	0/0:13,0:11:26.95:0,27,440	0/0:20,0:19:48.92:0,49,747	0/0:17,0:16:45.05:0,45,854	0/0:18,0:16:16.58:0,17,239	0/0:26,0:25:30.46:0,30,406	0/0:16,0:14:42:0,42,770	0/0:20,0:13:39.05:0,39,810	0/0:9,0:9:17.53:0,18,186	1/1:2,5:6:8.85:58,9,0	1/1:10,1:8:14.40:101,14,0	1/1:12,0:11:13.77:108,14,0	0/0:14,0:12:13.54:0,14,154	0/0:24,0:18:46.29:0,46,733	0/0:19,0:14:33.04:0,33,724	0/0:10,0:9:15.05:0,15,329
chr10	72352843	.	CA	C	4276.32	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.691;DP=664;FS=1.729;HRun=2;HaplotypeScore=66.7817;InbreedingCoeff=0.9998;MQ=63.30;MQ0=0;MQRankSum=-1.237;QD=35.34;ReadPosRankSum=2.911;VQSLOD=5.4008;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.29:0,93,1372	0/0:11,0:11:33.11:0,33,493	0/0:13,0:13:39.13:0,39,562	0/0:15,0:14:39.11:0,39,540	0/0:31,0:30:90.25:0,90,1251	0/0:24,0:24:72.22:0,72,1039	0/0:18,0:18:54.17:0,54,787	0/0:21,0:21:60.18:0,60,846	0/0:19,0:19:57.19:0,57,854	0/0:26,0:26:78.25:0,78,1121	0/0:13,0:13:36.05:0,36,492	1/1:0,32:32:87.15:1129,87,0	1/1:0,17:17:45.14:584,45,0	0/0:20,0:20:57.17:0,57,819	0/0:32,0:32:93.31:0,93,1376	0/0:28,0:28:84.26:0,84,1220	0/0:38,0:38:99:0,111,1641	0/0:33,0:33:99:0,99,1438	0/0:21,0:21:54.17:0,54,788	0/0:17,0:17:51.13:0,51,702	0/0:33,0:33:99:0,99,1461	1/1:0,13:13:39.13:506,39,0	1/1:0,16:16:45.14:578,45,0	1/1:0,43:43:99:1479,117,0	0/0:28,0:28:84.26:0,84,1234	0/0:34,0:34:99:0,99,1450	0/0:22,0:21:66.22:0,66,989	0/0:13,0:13:39.13:0,39,580
chr10	72354078	.	GAGAA	G	3590.85	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.781;DP=667;FS=0.972;HRun=0;HaplotypeScore=109.4630;InbreedingCoeff=0.9975;MQ=65.80;MQ0=5;MQRankSum=-0.379;QD=28.73;ReadPosRankSum=4.124;VQSLOD=3.6554;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:51.15:0,51,1135	0/0:11,0:11:25.89:0,26,566	0/0:31,0:22:39.82:0,40,637	0/0:27,0:16:19.79:0,20,382	0/0:36,0:36:93.29:0,93,2180	0/0:22,0:22:63.20:0,63,1476	0/0:17,0:17:42.93:0,43,821	0/0:34,0:34:90.25:0,90,1749	0/0:19,0:19:52.97:0,53,1124	0/0:29,0:29:75.02:0,75,1589	0/0:25,0:25:66.18:0,66,1416	1/1:0,21:21:45.15:782,45,0	1/1:3,23:26:39.05:674,39,0	0/0:20,0:20:54.17:0,54,1219	0/0:31,0:31:72.18:0,72,1552	0/0:23,0:23:57.17:0,57,1279	0/0:26,0:26:74.83:0,75,1710	1/1:2,17:19:27.09:469,27,0	0/0:27,0:26:53.97:0,54,931	0/0:27,0:27:75.20:0,75,1652	0/0:14,0:14:33.10:0,33,739	1/1:1,20:21:36.12:625,36,0	1/1:4,20:23:39.13:677,39,0	1/1:2,12:14:21.07:365,21,0	0/0:25,0:24:69.20:0,69,1627	0/0:31,0:31:87.25:0,87,1845	0/0:30,0:30:78.23:0,78,1798	0/0:16,0:16:45.14:0,45,1040
chr10	72354559	.	CT	C	5528.58	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=8.790;DP=570;FS=0.000;HRun=1;HaplotypeScore=70.4559;InbreedingCoeff=0.9309;MQ=86.80;MQ0=0;MQRankSum=-3.323;QD=27.51;ReadPosRankSum=3.244;VQSLOD=4.6414;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:66.22:914,66,0	0/0:6,0:6:18.05:0,18,264	0/0:22,0:22:61.41:0,61,733	0/0:23,0:22:45.48:0,45,690	0/0:20,0:20:60.14:0,60,852	0/0:23,0:23:69.18:0,69,1007	0/0:24,0:24:72.21:0,72,1100	0/0:17,0:17:48.16:0,48,747	0/0:29,0:29:87.27:0,87,1325	1/1:3,0:12:12.31:83,12,0	1/1:1,0:7:5.98:34,6,0	1/1:0,29:29:69.23:950,69,0	1/1:0,22:22:60.18:827,60,0	0/0:36,0:36:99:0,105,1553	0/0:18,0:18:54.18:0,54,860	0/0:20,0:20:60.16:0,60,884	0/1:3,0:13:2.41:2,0,4	1/1:0,20:20:54.18:749,54,0	0/0:19,0:19:53.75:0,54,780	0/0:19,0:19:54.14:0,54,791	0/0:37,0:37:99:0,111,1693	1/1:0,19:19:51.17:692,51,0	1/1:0,19:20:41.90:557,42,0	1/1:0,19:19:48.16:664,48,0	1/1:9,0:10:8.35:56,8,0	0/0:19,0:19:54.16:0,54,798	0/0:26,0:26:78.23:0,78,1171	0/0:11,0:11:33.11:0,33,525
chr10	72355397	.	CG	C	1050.80	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.601;DP=289;FS=0.833;HRun=4;HaplotypeScore=30.3224;InbreedingCoeff=0.7990;MQ=82.16;MQ0=0;MQRankSum=-1.642;QD=26.27;ReadPosRankSum=2.683;VQSLOD=1.9922;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:51.16:0,51,696	0/0:1,0:1:3.01:0,3,42	0/0:8,0:8:21.07:0,21,289	0/0:8,0:8:5.22:0,5,179	0/0:6,0:6:12.02:0,12,150	0/0:11,0:11:27.09:0,27,377	0/0:19,1:20:24.20:0,24,729	0/0:19,0:19:51.15:0,51,682	0/0:9,0:9:27.09:0,27,377	1/1:1,1:2:6.02:71,6,0	1/1:0,5:5:9.03:107,9,0	0/0:9,0:9:27.09:0,27,378	0/0:10,0:10:30.09:0,30,404	0/0:10,0:10:30.08:0,30,401	0/0:4,0:4:9.03:0,9,126	0/0:5,0:5:15.04:0,15,195	1/1:6,19:25:69.20:810,69,0	0/0:21,0:21:57.19:0,57,788	0/0:12,0:12:27.07:0,27,345	0/0:2,0:2:6.02:0,6,84	0/0:27,0:27:78.23:0,78,1042	0/0:8,0:8:24.08:0,24,335	0/0:5,0:5:15.05:0,15,205	0/0:17,0:17:48.16:0,48,667	1/1:0,8:8:18.05:209,18,0	0/0:8,0:8:21.07:0,21,294	0/0:5,0:5:15.05:0,15,209	0/0:3,0:3:9.03:0,9,126
chr10	72355401	.	GT	G	358.82	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.635;DP=280;FS=0.827;HRun=1;HaplotypeScore=32.4997;InbreedingCoeff=0.8061;MQ=84.24;MQ0=0;MQRankSum=-2.268;QD=8.97;ReadPosRankSum=2.591;VQSLOD=1.2244;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.01:0,54,785	0/0:1,0:1:3.01:0,3,30	0/0:7,0:7:21.07:0,21,329	0/0:10,0:10:14.17:0,14,318	0/0:3,0:3:9.03:0,9,141	0/0:10,0:10:27.09:0,27,422	0/0:20,0:20:47.95:0,48,875	0/0:20,0:20:57.18:0,57,850	0/0:9,0:9:27.08:0,27,400	1/1:1,1:2:5.23:42,5,0	1/1:5,0:5:8.15:36,8,0	0/0:9,0:9:27.09:0,27,422	0/0:10,0:10:30.10:0,30,467	0/0:11,0:11:33.10:0,33,491	0/0:3,0:3:9.03:0,9,141	0/0:5,0:5:15.05:0,15,233	1/1:21,4:25:21.99:347,22,0	0/0:21,0:21:59.54:0,60,853	0/0:9,0:9:27.09:0,27,419	0/0:2,0:2:6.02:0,6,94	0/0:27,0:27:75.24:0,75,1148	0/0:8,0:8:24.07:0,24,329	0/0:5,0:5:15.04:0,15,212	0/0:16,0:16:48.16:0,48,733	1/1:8,0:8:16.38:79,16,0	0/0:7,0:7:21.07:0,21,327	0/0:5,0:5:15.04:0,15,213	0/0:3,0:3:9.03:0,9,141
chr10	72356314	.	G	GCC	2790.12	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=-1.589;DP=557;FS=0.459;HRun=9;HaplotypeScore=87.4631;InbreedingCoeff=0.8289;MQ=81.03;MQ0=0;MQRankSum=-2.167;QD=14.46;ReadPosRankSum=-0.847;VQSLOD=1.4268;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:35:74.07:0,74,323	0/0:3,0:3:9.02:0,9,96	0/0:21,0:22:20.54:0,21,372	0/1:21,0:21:5.67:6,0,315	0/0:36,0:36:81.17:0,81,862	0/0:24,0:24:60.10:0,60,623	0/0:34,0:34:75.12:0,75,789	0/0:27,0:27:51:0,51,519	0/0:22,0:22:51.09:0,51,530	1/1:7,0:11:15.02:172,15,0	1/1:5,0:8:0.94:3,1,0	1/1:5,18:24:38.62:563,39,0	1/1:7,10:18:23.44:323,23,0	0/0:22,0:22:57.09:0,57,589	0/0:22,0:22:63.14:0,63,670	0/0:19,0:19:48.10:0,48,502	1/1:7,1:28:29.78:287,30,0	1/1:5,15:24:50.14:702,50,0	0/1:11,0:12:1.45:1,0,180	0/0:15,0:15:39.98:0,40,416	0/0:38,0:38:99:0,99,1046	1/1:1,1:10:9.02:103,9,0	1/1:2,5:8:9.03:136,9,0	1/1:5,17:23:41.58:583,42,0	1/1:6,0:6:9.03:115,9,0	0/0:21,0:21:51.09:0,51,542	0/0:17,0:18:41.78:0,42,417	0/0:6,0:6:18.05:0,18,192
chr10	72357082	.	GC	G	7319.35	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.144;DP=793;FS=3.614;HRun=8;HaplotypeScore=79.3173;InbreedingCoeff=0.9997;MQ=80.19;MQ0=0;MQRankSum=-1.450;QD=24.64;ReadPosRankSum=3.115;VQSLOD=5.7215;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:78.12:753,78,0	0/0:11,0:11:27.07:0,27,316	0/0:22,0:22:41.42:0,41,551	0/0:28,0:28:44.03:0,44,595	0/0:31,0:31:90.25:0,90,1064	0/0:27,0:27:75.22:0,75,894	0/0:30,0:30:90.24:0,90,1061	0/0:30,0:30:69.20:0,69,815	0/0:28,0:28:75.23:0,75,906	1/1:4,28:32:84.12:806,84,0	1/1:4,28:32:81.07:772,81,0	1/1:2,34:37:99:991,104,0	1/1:2,29:31:78.12:753,78,0	0/0:40,0:40:99:0,111,1331	0/0:36,0:36:99:0,105,1258	0/0:33,0:33:96.28:0,96,1148	1/1:0,21:21:60.10:579,60,0	1/1:2,10:12:30.05:290,30,0	0/0:15,0:15:39.10:0,39,453	0/0:38,0:38:99:0,102,1197	0/0:44,0:43:99:0,129,1496	1/1:2,35:37:90.04:850,90,0	1/1:1,22:23:60.05:570,60,0	1/1:2,24:26:66.10:637,66,0	1/1:2,12:14:33.05:319,33,0	0/0:35,1:36:73.30:0,73,1143	0/0:34,0:34:93.28:0,93,1116	0/0:13,0:13:39.12:0,39,471
chr10	72357935	.	C	CT	5246.75	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-11.835;DP=642;FS=2.083;HRun=5;HaplotypeScore=65.8419;InbreedingCoeff=0.9990;MQ=88.47;MQ0=0;MQRankSum=-2.227;QD=33.63;ReadPosRankSum=3.244;VQSLOD=5.4285;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:54.18:709,54,0	0/0:8,0:8:21.05:0,21,225	0/0:33,0:31:65.38:0,65,648	0/0:25,0:25:28.44:0,28,371	0/0:27,0:27:75.17:0,75,798	0/0:29,0:29:80.79:0,81,848	0/0:19,0:19:57.13:0,57,604	0/0:31,0:31:81.16:0,81,843	0/0:17,0:17:45.09:0,45,474	0/0:28,0:28:84.21:0,84,903	0/0:15,0:15:30.05:0,30,308	1/1:2,22:24:63.20:828,63,0	1/1:1,18:19:48.16:632,48,0	0/0:23,0:23:66.17:0,66,709	0/0:25,0:25:66.16:0,66,709	0/0:19,0:19:51.13:0,51,548	0/0:34,0:34:96.24:0,96,1031	1/1:3,31:34:84.27:1105,84,0	0/0:24,0:24:60.14:0,60,638	0/0:28,0:28:69.17:0,69,741	0/0:25,0:25:75.19:0,75,806	1/1:2,20:22:57.19:750,57,0	1/1:0,16:16:45.15:591,45,0	1/1:0,20:20:48.16:631,48,0	0/0:18,0:18:48.12:0,48,516	0/0:27,0:27:81.19:0,81,856	0/0:16,0:16:48.12:0,48,515	0/0:15,0:15:45.09:0,45,474
chr10	72358074	.	AAT	A	5087.16	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.867;DP=682;FS=0.374;HRun=0;HaplotypeScore=85.0244;InbreedingCoeff=0.9979;MQ=81.54;MQ0=0;MQRankSum=-1.487;QD=43.11;ReadPosRankSum=3.771;VQSLOD=6.7427;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,2076	0/0:6,0:6:18.06:0,18,347	0/0:21,0:21:63.22:0,63,1179	0/0:15,0:15:28.42:0,28,647	0/0:34,0:34:99:0,102,1937	0/0:28,0:28:84.25:0,84,1539	0/0:16,0:16:48.16:0,48,927	0/0:39,0:39:99:0,111,2076	0/0:28,0:28:84.29:0,84,1622	0/0:25,0:25:72.25:0,72,1391	0/0:21,0:21:63.22:0,63,1185	1/1:0,23:23:66.22:1010,66,0	1/1:1,23:24:63.21:963,63,0	0/0:20,0:20:57.15:0,57,1002	0/0:21,0:21:60.19:0,60,1113	0/0:25,0:25:75.24:0,75,1415	0/0:33,0:33:96.33:0,96,1852	0/0:20,0:20:60.15:0,60,1104	0/0:17,0:17:51.17:0,51,972	0/0:33,0:33:96.31:0,96,1818	0/0:25,0:25:75.20:0,75,1325	1/1:0,23:23:66.22:1010,66,0	1/1:0,14:14:42.14:634,42,0	1/1:0,34:34:96.33:1470,96,0	0/0:21,0:21:60.21:0,60,1159	0/0:46,0:46:99:0,138,2654	0/0:19,0:18:57.20:0,57,1089	0/0:14,0:14:42.14:0,42,811
chr10	72358560	.	GCACA	G	863.07	PASS	AB=0.928;AC=16;AF=0.296;AN=54;BaseQRankSum=5.559;DP=502;FS=1.719;HRun=0;HaplotypeScore=90.2695;InbreedingCoeff=0.4837;MQ=62.48;MQ0=10;MQRankSum=-0.639;QD=4.62;ReadPosRankSum=2.891;VQSLOD=1.8189;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:30:14.96:139,15,0	0/0:5,0:5:3.01:0,3,71	./.	0/0:33,0:22:0.89:0,1,2	0/0:8,0:8:9.03:0,9,175	0/1:24,1:26:7.63:8,0,677	0/0:19,0:21:29.57:0,30,527	0/0:19,0:18:10.85:0,11,182	0/0:20,0:22:20.78:0,21,385	0/0:18,0:18:27.56:0,28,574	0/0:13,0:12:2.70:0,3,68	1/1:13,7:20:15.05:220,15,0	1/1:12,4:15:12.04:187,12,0	0/0:16,0:18:14.78:0,15,227	0/0:22,0:23:26.83:0,27,570	0/1:15,1:18:25.91:26,0,327	0/0:11,0:11:18.02:0,18,314	0/0:6,0:15:21.06:0,21,359	0/0:10,0:10:6.02:0,6,138	0/1:16,0:18:10.14:10,0,235	0/0:32,0:31:24.03:0,24,512	1/1:5,2:8:6.01:75,6,0	1/1:6,1:9:6.01:74,6,0	1/1:13,9:21:18.06:280,18,0	0/0:18,0:17:3.01:0,3,71	0/1:18,1:19:16.62:17,0,444	0/0:11,0:11:19.31:0,19,381	0/0:8,0:10:17.46:0,17,306
chr10	72358770	.	TTTTC	T	904.81	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=0.960;DP=474;FS=0.560;HRun=0;HaplotypeScore=92.0829;InbreedingCoeff=0.4738;MQ=61.15;MQ0=21;MQRankSum=-2.994;QD=7.12;ReadPosRankSum=-0.355;VQSLOD=2.1757;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:19:38.59:327,39,0	0/0:9,0:9:27.04:0,27,351	0/0:70,0:23:17.92:0,18,236	0/0:46,0:11:5.72:0,6,37	0/0:16,0:16:39.44:0,39,534	0/0:12,0:12:24.47:0,24,350	0/0:8,0:7:11.97:0,12,126	0/0:30,0:30:26.56:0,27,682	0/0:9,0:8:18.02:0,18,274	1/1:16,0:14:10.83:119,11,0	0/1:11,0:11:65.83:68,0,66	0/0:10,0:9:6.30:0,6,38	0/0:9,0:9:2.68:0,3,13	0/0:7,0:7:14.06:0,14,214	0/0:15,0:13:26.90:0,27,430	0/0:11,0:9:25.05:0,25,316	0/1:27,0:21:19.24:76,0,19	1/1:11,4:13:27.01:329,27,0	0/0:16,0:15:36.63:0,37,440	0/0:18,0:18:32.89:0,33,522	0/0:8,0:8:6.46:0,6,100	1/1:6,0:5:4.82:33,5,0	0/1:16,0:16:5.67:69,0,6	0/0:8,0:7:8.91:0,9,33	0/1:14,0:14:48.44:48,0,66	0/0:19,0:19:46.29:0,46,646	0/0:19,0:19:54.79:0,55,832	0/0:6,0:6:17.72:0,18,276
chr10	72358775	.	TTTC	T	1211.05	PASS	AB=0.989;AC=17;AF=0.304;AN=56;BaseQRankSum=2.547;DP=507;FS=1.685;HRun=0;HaplotypeScore=84.4652;InbreedingCoeff=0.6432;MQ=52.72;MQ0=42;MQRankSum=-3.648;QD=7.97;ReadPosRankSum=-3.487;VQSLOD=2.1086;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,3:18:38.70:352,39,0	0/0:9,0:9:26.96:0,27,288	0/0:75,0:20:21.96:0,22,237	0/0:58,0:11:6.09:0,6,39	0/0:18,0:16:23.27:0,23,412	0/0:10,0:10:23.14:0,23,269	0/0:9,0:7:11.95:0,12,103	0/0:33,0:33:18.92:0,19,575	0/0:9,0:7:18:0,18,236	1/1:18,0:15:22.08:219,22,0	0/1:13,0:12:13.48:115,0,13	0/0:11,0:8:3.03:0,3,17	1/1:13,1:13:6.25:34,6,0	0/0:7,0:6:14.70:0,15,178	0/0:13,0:11:25.42:0,25,335	0/0:12,0:9:26.17:0,26,297	0/1:27,1:22:4.62:118,0,5	1/1:15,0:12:26.11:234,26,0	0/0:19,0:17:44.76:0,45,453	0/0:15,0:14:35.84:0,36,414	0/0:9,0:8:6.45:0,6,82	1/1:5,0:4:5.97:48,6,0	1/1:15,0:15:19.26:174,19,0	1/1:8,0:7:3.29:10,3,0	0/1:14,0:14:19.67:92,0,20	0/0:22,0:21:26.46:0,26,491	0/0:20,0:19:56.36:0,56,707	0/0:6,0:6:17.98:0,18,234
chr10	72358776	.	TTC	T	1734.90	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=2.377;DP=511;FS=4.281;HRun=0;HaplotypeScore=76.2115;InbreedingCoeff=0.7261;MQ=52.49;MQ0=42;MQRankSum=-5.563;QD=8.42;ReadPosRankSum=-4.222;VQSLOD=1.8935;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,1:18:38.76:312,39,0	0/0:9,0:9:24.72:0,25,186	0/0:75,0:20:12.67:0,13,217	0/0:60,0:11:6.03:0,6,37	0/0:18,0:16:1.40:0,1,298	0/1:10,0:10:0.91:1,0,171	0/0:9,0:7:11.23:0,11,69	0/1:34,0:33:30.73:31,0,416	0/0:11,0:8:17.92:0,18,185	1/1:15,3:15:28.74:318,29,0	1/1:12,1:12:13.58:180,14,0	1/1:11,0:8:2.46:14,2,0	1/1:4,10:13:9.32:68,9,0	0/0:7,0:6:14.05:0,14,133	0/0:13,0:11:20.30:0,20,216	0/0:12,0:9:25.34:0,25,237	1/1:28,0:22:8.52:139,9,0	1/1:15,0:12:24.74:201,25,0	0/0:19,0:17:27.26:0,27,335	0/0:15,0:14:34.25:0,34,329	0/0:9,0:8:6.03:0,6,54	1/1:4,0:3:6.01:70,6,0	1/1:14,1:15:34.96:322,35,0	1/1:8,0:7:11.54:78,12,0	1/1:13,1:14:15.47:203,15,0	0/0:22,0:21:4.79:0,5,348	0/0:20,0:19:49.31:0,49,547	0/0:6,0:6:17.58:0,18,177
chr10	72358795	.	GGTT	G	166.55	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=3.604;DP=559;FS=26.293;HRun=0;HaplotypeScore=84.7461;InbreedingCoeff=0.3975;MQ=37.75;MQ0=69;MQRankSum=-3.106;QD=0.99;ReadPosRankSum=-0.926;VQSLOD=0.0639;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,4:19:24.98:199,25,0	0/0:9,0:9:23.80:0,24,363	0/0:77,0:9:10.74:0,11,141	0/1:76,0:11:8.69:9,0,36	0/0:19,0:17:25.39:0,25,476	0/0:9,0:9:9.75:0,10,292	0/0:8,0:5:7.57:0,8,106	0/0:34,0:31:87.16:0,87,1337	0/0:11,0:8:15.91:0,16,238	0/0:15,0:11:20.54:0,21,180	0/1:10,0:9:0.61:1,0,151	0/0:13,0:9:14.99:0,15,151	0/1:14,0:13:16.51:17,0,126	0/0:10,0:9:20.08:0,20,312	0/0:13,0:11:25.02:0,25,439	0/0:16,0:11:26.85:0,27,451	0/1:28,0:21:1.75:2,0,142	1/1:18,0:12:13.32:69,13,0	0/0:35,0:26:71.08:0,71,1006	0/0:16,0:13:21:0,21,524	0/0:10,0:9:7.38:0,7,91	0/0:4,0:3:2.68:0,3,11	0/0:16,0:16:21.07:0,21,312	0/0:10,0:8:4.79:0,5,177	0/0:12,0:12:17.91:0,18,257	0/0:22,0:21:59.87:0,60,852	0/0:22,0:20:46.83:0,47,689	0/0:9,0:8:21.03:0,21,307
chr10	72360097	.	T	TAATA	1415.59	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.568;DP=565;FS=0.852;HRun=0;HaplotypeScore=81.4894;InbreedingCoeff=0.8152;MQ=57.03;MQ0=12;MQRankSum=0.238;QD=37.25;ReadPosRankSum=2.778;VQSLOD=3.4515;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,25:38:63.22:1510,63,0	0/0:8,0:8:15.05:0,15,255	0/0:10,0:2:3.01:0,3,51	0/0:11,0:6:15.05:0,15,244	0/0:25,0:25:72.23:0,72,1186	0/0:20,0:20:45.15:0,45,759	0/0:15,0:15:30.10:0,30,508	0/0:36,0:35:90.30:0,90,1488	0/0:19,0:19:51.16:0,51,838	0/0:23,0:22:57.19:0,57,952	0/0:14,0:14:39.12:0,39,636	0/0:18,0:18:33.11:0,33,559	0/0:20,0:20:54.18:0,54,911	0/0:14,0:14:33.11:0,33,560	0/0:15,0:15:33.11:0,33,556	0/0:27,0:27:69.21:0,69,1118	0/0:25,0:25:60.20:0,60,1014	0/0:24,0:23:51.17:0,51,864	0/0:21,0:19:36.12:0,36,609	0/0:24,0:24:63.22:0,63,1065	0/0:18,0:17:33.11:0,33,555	0/0:11,0:11:15.05:0,15,247	0/0:19,0:19:42.14:0,42,712	0/0:11,0:11:27.09:0,27,458	0/0:21,0:21:54.18:0,54,916	0/0:26,0:26:54.18:0,54,914	0/0:32,0:32:87.28:0,87,1449	0/0:20,0:20:51.17:0,51,865
chr10	72361008	.	CTACATCCTGGA	C	5674.79	PASS	AB=0.986;AC=10;AF=0.179;AN=56;BaseQRankSum=11.883;DP=746;FS=5.571;HRun=0;HaplotypeScore=247.8601;InbreedingCoeff=0.7751;MQ=81.68;MQ0=0;MQRankSum=-11.992;QD=50.67;ReadPosRankSum=1.093;VQSLOD=4.2045;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,151,7589	0/0:9,0:9:27.09:0,27,1477	0/0:21,0:21:60.20:0,60,2452	0/0:33,0:33:95.91:0,96,3784	0/0:32,0:32:96.32:0,96,4973	0/0:35,0:35:99:0,99,5343	0/0:25,0:25:72.25:0,72,3475	0/0:45,0:45:99:0,135,5967	0/0:33,0:33:99:0,99,5517	1/1:4,13:17:39.13:1386,39,0	1/1:0,21:21:60.21:1905,60,0	0/0:27,0:27:81.28:0,81,4324	0/0:28,0:28:84.29:0,84,4508	0/0:25,0:25:75.23:0,75,3459	0/0:23,0:22:69.22:0,69,3644	0/0:27,0:27:78.27:0,78,4332	1/1:1,12:13:24.08:806,24,0	0/1:10,0:10:99:181,0,285	0/0:25,0:25:72.25:0,72,3263	0/0:27,0:27:75.26:0,75,3916	0/0:44,0:44:99:0,132,7213	0/0:22,0:22:63.22:0,63,3386	0/0:23,0:23:69.22:0,69,3556	0/0:35,0:35:99:0,105,5414	1/1:0,17:17:39.13:1389,39,0	0/1:33,1:34:6.40:6,0,5094	0/0:22,0:20:66.23:0,66,3342	0/0:23,0:23:60.21:0,60,3348
chr10	72361011	.	CATCCTGGATGCTAAT	C	669.99	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=10.729;DP=743;FS=0.000;HRun=0;HaplotypeScore=327.6835;InbreedingCoeff=0.8719;MQ=82.79;MQ0=0;MQRankSum=-10.706;QD=9.18;ReadPosRankSum=1.345;VQSLOD=1.3803;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,120,7864	0/0:9,0:9:24.08:0,24,1742	0/0:22,0:22:36.12:0,36,2100	0/0:33,0:33:60.19:0,60,3038	0/0:32,0:32:81.28:0,81,5394	0/0:36,0:36:93.32:0,93,6643	0/0:26,0:26:57.20:0,57,3407	0/0:46,0:46:90.30:0,90,5844	0/0:33,0:33:96.31:0,96,5976	1/1:13,0:13:16.07:47,16,0	0/1:21,0:21:7.91:65,0,8	0/0:28,0:28:72.25:0,72,4307	0/0:28,0:28:75.24:0,75,4323	0/0:24,0:24:54.19:0,54,3388	0/0:22,0:21:60.21:0,60,4109	0/0:27,0:27:75.26:0,75,5272	1/1:12,0:12:13.27:43,13,0	1/1:4,6:10:15.05:604,15,0	0/0:24,0:24:45.12:0,45,2395	0/0:29,0:29:69.24:0,69,4586	0/0:44,0:44:99:0,117,7894	0/0:21,0:21:57.20:0,57,3288	0/0:23,0:23:57.20:0,57,3373	0/0:35,0:35:84.29:0,84,4955	1/1:17,0:17:21.67:72,22,0	0/0:34,0:34:77.60:0,78,5416	0/0:22,0:20:51.17:0,51,3366	0/0:21,0:21:60.21:0,60,3598
chr10	72362211	.	T	TC	3750.02	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.243;DP=655;FS=8.842;HRun=7;HaplotypeScore=70.6469;InbreedingCoeff=0.9995;MQ=86.94;MQ0=0;MQRankSum=-5.587;QD=30.74;ReadPosRankSum=0.257;VQSLOD=3.6587;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,120,1151	0/0:10,0:10:27.04:0,27,261	0/0:19,0:20:35.68:0,36,429	0/0:28,0:28:56.97:0,57,522	0/0:25,0:25:75.12:0,75,724	0/0:26,0:26:69.10:0,69,665	0/0:15,0:15:42.07:0,42,405	0/0:30,0:30:63.05:0,63,600	0/0:14,0:14:39.06:0,39,377	0/0:18,0:18:45.07:0,45,434	0/0:20,0:20:60.05:0,60,562	1/1:2,26:28:75.21:893,75,0	1/1:3,18:21:48.15:578,48,0	0/0:22,0:23:59.10:0,59,551	0/0:31,0:31:81.11:0,81,777	0/0:25,0:25:72.08:0,72,683	0/0:33,0:33:93.15:0,93,898	0/0:11,0:11:30:0,30,280	0/0:20,0:21:47.09:0,47,436	0/0:21,0:21:60.07:0,60,572	0/0:27,0:27:69.10:0,69,666	1/1:1,18:19:51.16:616,51,0	1/1:1,18:19:48.15:577,48,0	1/1:2,33:35:90.28:1086,90,0	0/0:19,0:19:57.06:0,57,542	0/0:25,0:25:72.11:0,72,695	0/0:32,0:32:93.13:0,93,892	0/0:14,0:14:33.05:0,33,319
chr10	72363237	.	GA	G	593.75	PASS	AB=1.000;AC=17;AF=0.315;AN=54;BaseQRankSum=2.231;DP=378;FS=2.682;HRun=1;HaplotypeScore=38.3008;InbreedingCoeff=0.3919;MQ=51.90;MQ0=48;MQRankSum=-1.126;QD=4.91;ReadPosRankSum=-2.495;VQSLOD=-0.4262;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:11:1.52:70,2,0	0/0:3,0:3:3:0,3,25	0/0:32,0:8:15.59:0,16,92	0/0:32,0:6:10.96:0,11,85	0/0:6,0:6:2.97:0,3,25	0/0:11,1:10:16.96:0,17,144	0/0:24,1:22:31.89:0,32,221	0/0:17,0:9:8.80:0,9,59	0/1:13,0:12:11.08:87,0,11	0/1:3,0:6:9.86:10,0,38	0/0:5,0:3:0.89:0,1,2	1/1:3,0:3:6:52,6,0	1/1:13,0:9:20.97:175,21,0	0/0:14,0:14:21.50:0,22,147	0/0:11,0:11:21.63:0,22,147	0/0:25,2:25:59.67:0,60,472	0/1:18,0:13:25.28:25,0,112	0/1:12,0:7:0.28:46,0,0	0/0:11,0:10:12.02:0,12,136	./.	0/0:22,0:19:2.55:0,3,220	1/1:5,1:6:8.74:65,9,0	1/1:1,0:1:0.47:1,0,0	1/1:23,0:12:26.21:215,26,0	0/0:13,0:10:5.64:0,6,50	0/0:11,0:10:14.80:0,15,114	0/0:11,0:11:6.60:0,7,147	0/1:8,0:3:7.44:7,0,34
chr10	72364865	.	AC	A	2124.28	PASS	AB=0.886;AC=26;AF=0.464;AN=56;BaseQRankSum=1.485;DP=435;FS=14.845;HRun=11;HaplotypeScore=54.9967;InbreedingCoeff=0.4378;MQ=71.07;MQ0=0;MQRankSum=0.284;QD=7.48;ReadPosRankSum=4.206;VQSLOD=0.5302;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,1:19:8.78:0,9,71	0/0:11,0:11:8.98:0,9,78	0/0:9,0:8:8.65:0,9,84	0/0:12,0:12:14.58:0,15,96	0/0:10,0:10:6:0,6,57	0/0:17,0:18:23.98:0,24,231	0/1:22,2:25:0.76:1,0,175	0/1:19,3:22:31.23:31,0,69	0/0:20,1:21:15.31:0,15,347	1/1:3,3:6:8.97:74,9,0	1/1:4,3:7:5.98:49,6,0	1/1:18,9:29:51.93:404,52,0	1/1:12,12:25:31.95:252,32,0	0/1:9,5:14:22.60:41,0,23	0/1:12,2:14:25.22:25,0,162	0/0:13,0:13:18.02:0,18,173	1/1:10,29:40:82.92:671,83,0	0/0:14,0:14:34.54:0,35,197	0/1:10,0:10:3.33:3,0,137	0/1:8,0:8:0:0,0,0	0/0:21,0:21:17.91:0,18,164	1/1:6,10:16:23.83:187,24,0	1/1:4,2:6:5.99:49,6,0	1/1:7,18:27:57.03:436,57,0	1/1:6,5:11:8.95:72,9,0	0/1:9,1:10:11.82:12,0,78	0/1:9,4:12:6.62:7,0,128	0/0:3,0:3:6.02:0,6,64
chr10	72367216	.	CAT	C	1056.89	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.971;DP=634;FS=17.853;HRun=0;HaplotypeScore=100.6827;InbreedingCoeff=0.9779;MQ=92.31;MQ0=0;MQRankSum=-9.687;QD=23.49;ReadPosRankSum=0.755;VQSLOD=3.3236;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,2546	0/0:5,0:5:15.05:0,15,294	0/0:25,0:25:72.25:0,72,1410	0/0:30,0:30:87.27:0,87,1611	0/0:12,0:12:36.11:0,36,694	0/0:18,0:18:54.19:0,54,1083	0/0:34,0:34:99:0,102,2047	0/0:31,0:31:90.31:0,90,1799	0/0:19,0:19:57.20:0,57,1146	1/1:3,8:11:27.04:301,27,0	1/1:1,3:4:9.01:94,9,0	0/0:28,0:28:81.28:0,81,1634	0/0:26,0:26:78.23:0,78,1477	0/0:28,0:28:81.26:0,81,1569	0/0:25,0:25:75.26:0,75,1488	0/0:26,0:26:78.27:0,78,1584	1/1:1,19:20:44.86:493,45,0	0/0:28,0:28:84.26:0,84,1655	0/0:16,0:16:48.16:0,48,961	0/0:11,0:11:30.10:0,30,608	0/0:38,0:38:99:0,114,2287	0/0:20,0:20:60.19:0,60,1181	0/0:10,0:10:30.09:0,30,573	0/0:44,0:44:99:0,129,2528	1/1:1,9:10:27.08:325,27,0	0/0:35,1:36:75.06:0,75,2033	0/0:25,0:25:72.25:0,72,1455	0/0:10,0:10:27.09:0,27,548
chr10	72367223	.	TGAG	T	1237.99	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.301;DP=626;FS=17.430;HRun=0;HaplotypeScore=111.9335;InbreedingCoeff=0.9775;MQ=89.96;MQ0=0;MQRankSum=-10.206;QD=30.95;ReadPosRankSum=0.720;VQSLOD=2.8611;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,3177	0/0:5,0:5:15.05:0,15,342	0/0:23,0:23:66.16:0,66,1423	0/0:28,0:28:79.89:0,80,1753	0/0:12,0:12:36.12:0,36,880	0/0:17,0:17:51.18:0,51,1244	0/0:33,0:33:99:0,99,2388	0/0:31,0:31:90.30:0,90,2100	0/0:18,0:18:54.19:0,54,1294	1/1:0,8:8:24.08:324,24,0	1/1:0,3:3:8.99:95,9,0	0/0:26,0:26:75.26:0,75,1848	0/0:23,0:23:69.24:0,69,1636	0/0:26,0:26:78.27:0,78,1827	0/0:24,0:24:72.25:0,72,1772	0/0:27,0:27:81.26:0,81,1916	1/1:1,19:20:51.03:624,51,0	0/0:28,0:28:84.29:0,84,2065	0/0:17,0:17:51.17:0,51,1183	0/0:11,0:11:33.11:0,33,813	0/0:44,0:44:99:0,132,3216	0/0:21,0:21:60.21:0,60,1449	0/0:9,0:9:27.07:0,27,613	0/0:45,0:45:99:0,132,3236	1/1:0,9:9:27.09:351,27,0	0/0:40,1:41:81.77:0,82,2883	0/0:22,0:22:66.19:0,66,1495	0/0:10,0:10:27.09:0,27,665
chr10	72367552	.	GCA	G	98.21	PASS	AB=0.793;AC=3;AF=0.058;AN=52;BaseQRankSum=4.258;DP=396;FS=5.065;HRun=0;HaplotypeScore=85.5948;InbreedingCoeff=0.3971;MQ=45.48;MQ0=30;MQRankSum=-4.476;QD=2.34;ReadPosRankSum=1.391;VQSLOD=1.4999;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:16:29.74:0,30,283	0/0:4,0:4:12.04:0,12,228	0/0:3,0:2:6.02:0,6,78	0/0:2,0:1:3.01:0,3,43	0/0:8,0:7:9.03:0,9,158	0/0:6,0:6:15.03:0,15,228	0/0:32,0:25:51.11:0,51,773	0/0:4,0:1:3.01:0,3,43	0/0:17,0:15:30.97:0,31,503	1/1:14,5:19:10.56:149,11,0	0/0:9,2:12:1.55:0,2,4	0/0:21,0:19:45.14:0,45,755	0/0:15,0:14:27.09:0,27,386	0/0:15,0:14:36.12:0,36,616	0/0:14,0:12:30.09:0,30,507	0/0:12,0:11:30.08:0,30,486	0/1:17,6:23:24.64:46,0,25	0/0:18,0:18:13.64:0,14,162	0/0:15,0:12:30.95:0,31,385	./.	0/0:34,0:26:42:0,42,579	./.	0/0:7,0:6:9.03:0,9,142	0/0:33,0:31:15:0,15,200	0/0:16,0:16:1.78:0,2,4	0/0:20,0:17:44.50:0,45,653	0/0:13,0:10:30.09:0,30,502	0/0:8,0:8:15:0,15,234
chr10	72367554	.	A	AGCGAGCGAGCGAG	1428.20	PASS	AB=0.893;AC=6;AF=0.111;AN=54;BaseQRankSum=4.926;DP=382;FS=1.041;HRun=0;HaplotypeScore=135.3106;InbreedingCoeff=0.3645;MQ=45.42;MQ0=36;MQRankSum=-4.782;QD=25.06;ReadPosRankSum=3.830;VQSLOD=2.5241;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:17:27.02:0,27,768	0/0:4,0:4:12.04:0,12,503	0/0:3,0:2:6.02:0,6,157	0/0:1,0:1:3.01:0,3,80	0/0:8,0:7:9.03:0,9,323	0/0:6,0:6:14.96:0,15,470	0/0:33,0:26:54.17:0,54,1972	0/0:4,0:1:3.01:0,3,89	0/0:18,0:15:30.99:0,31,1179	0/1:8,3:11:99:750,0,116	0/0:9,4:13:0.47:0,0,2	0/0:23,0:20:45.63:0,46,1692	0/0:16,0:14:26.66:0,27,994	0/0:16,0:14:36.12:0,36,1506	0/0:14,0:12:30.09:0,30,1115	0/0:12,0:11:30.10:0,30,1141	1/1:14,1:15:17.82:637,18,0	0/0:17,0:17:39.05:0,39,730	0/0:14,0:11:28.69:0,29,667	0/0:4,0:4:3:0,3,25	0/0:35,0:26:42.04:0,42,1152	./.	0/0:8,0:7:9.50:0,10,363	0/0:31,0:29:15:0,15,345	1/1:6,4:10:1.55:97,2,0	0/1:21,0:18:63.69:64,0,1370	0/0:12,0:9:27.09:0,27,1131	0/0:6,0:6:15.05:0,15,628
chr10	72367556	.	GCA	G	108.96	PASS	AB=0.933;AC=5;AF=0.093;AN=54;BaseQRankSum=6.011;DP=371;FS=7.692;HRun=0;HaplotypeScore=76.9814;InbreedingCoeff=0.3351;MQ=45.02;MQ0=36;MQRankSum=-5.716;QD=1.98;ReadPosRankSum=2.429;VQSLOD=0.6852;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:15:11.94:0,12,109	0/0:4,0:4:12.04:0,12,228	0/0:3,0:2:5.93:0,6,60	0/0:2,0:1:2.98:0,3,22	0/0:8,0:7:9.03:0,9,143	0/0:6,0:6:15.03:0,15,224	0/0:34,0:27:54.11:0,54,817	0/0:4,0:1:3.01:0,3,43	0/0:19,0:16:33.54:0,34,492	1/1:11,0:11:8.16:62,8,0	0/1:12,0:12:0:0,0,0	0/0:23,0:20:45.14:0,45,753	0/0:17,0:15:27.05:0,27,346	0/0:16,0:14:36.12:0,36,616	0/0:13,0:11:27.08:0,27,464	0/0:13,0:12:33.07:0,33,498	0/1:16,0:16:8.05:8,0,8	0/1:12,4:16:30.91:140,0,31	0/0:11,0:8:22.17:0,22,290	0/0:4,0:4:3.01:0,3,43	0/0:30,0:21:27.03:0,27,414	./.	0/0:8,0:7:9.03:0,9,142	0/0:29,0:27:9.03:0,9,137	0/0:7,2:9:0.22:0,0,1	0/0:21,0:18:41.99:0,42,625	0/0:12,0:9:27.09:0,27,478	0/0:6,0:6:14.98:0,15,233
chr10	72367566	.	ACG	A	428.83	PASS	AB=0.927;AC=19;AF=0.365;AN=52;BaseQRankSum=5.621;DP=396;FS=25.184;HRun=0;HaplotypeScore=84.9889;InbreedingCoeff=0.1234;MQ=44.69;MQ0=38;MQRankSum=-3.687;QD=1.92;ReadPosRankSum=0.304;VQSLOD=0.2026;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:17:17.58:125,18,0	0/0:5,0:5:11.90:0,12,88	./.	./.	0/1:8,0:7:25.12:32,0,25	0/1:7,3:10:33.89:34,0,55	0/0:36,0:29:23.81:0,24,404	1/1:4,0:1:0.47:1,0,0	0/1:14,8:19:52.63:53,0,187	0/1:16,0:15:38.17:119,0,38	0/1:12,0:12:0:0,0,0	0/0:23,0:20:41.74:0,42,359	1/1:10,0:10:2.63:13,3,0	0/0:18,0:16:21.62:0,22,300	0/0:13,0:11:26.69:0,27,248	0/0:12,0:11:16.79:0,17,203	1/1:19,0:18:3.57:63,4,0	1/1:15,0:15:4.44:83,4,0	0/0:11,0:7:6.93:0,7,41	0/0:7,0:7:8.75:0,9,51	0/1:22,5:18:27.31:27,0,74	0/0:8,0:7:3.01:0,3,32	0/0:10,0:9:5.98:0,6,53	0/1:34,0:32:7.19:7,0,15	0/0:9,0:9:0.12:0,0,1	0/0:20,0:17:21.46:0,21,237	0/1:15,0:12:12.70:13,0,204	0/1:7,0:7:7.51:8,0,62
chr10	72367568	.	GCA	G	106.24	PASS	AB=0.967;AC=18;AF=0.360;AN=50;BaseQRankSum=3.871;DP=415;FS=5.294;HRun=0;HaplotypeScore=86.7928;InbreedingCoeff=0.1629;MQ=44.19;MQ0=40;MQRankSum=1.287;QD=0.46;ReadPosRankSum=0.964;VQSLOD=1.3105;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,11:18:6.02:66,6,0	./.	./.	./.	1/1:9,0:8:4.91:21,5,0	0/1:12,0:12:8.80:9,0,44	0/0:36,0:29:11.46:0,11,400	0/0:8,0:4:4.21:0,4,23	0/1:21,0:18:12.74:13,0,153	0/0:18,0:17:8.09:0,8,107	0/1:12,0:12:0:0,0,0	0/0:23,0:20:8.35:0,8,77	1/1:11,0:9:3.01:33,3,0	0/1:16,3:17:11.80:12,0,217	0/0:12,0:10:11.88:0,12,125	0/1:12,1:12:17.79:18,0,154	0/1:19,0:18:0.58:1,0,26	0/0:15,0:15:11.74:0,12,72	0/0:11,0:7:2.22:0,2,7	0/0:7,0:7:9.03:0,9,121	1/1:30,0:21:2.92:17,3,0	0/0:8,0:7:2.37:0,2,8	0/1:10,0:9:7.33:14,0,7	1/1:33,0:31:2.76:33,3,0	0/0:9,0:9:0.22:0,0,1	0/0:22,0:19:36.89:0,37,343	0/1:14,1:14:8.71:9,0,206	0/0:7,0:7:6.02:0,6,76
chr10	72367570	.	A	ACGCGCGCG	692.50	PASS	AB=1.000;AC=12;AF=0.231;AN=52;BaseQRankSum=2.876;DP=439;FS=1.680;HRun=0;HaplotypeScore=129.1637;InbreedingCoeff=0.5105;MQ=44.24;MQ0=43;MQRankSum=-0.040;QD=5.58;ReadPosRankSum=0.793;VQSLOD=2.6514;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:19:18.05:0,18,406	0/0:3,0:3:6.02:0,6,157	./.	./.	0/0:9,0:8:9.03:0,9,186	0/0:12,0:12:15.65:0,16,257	0/0:39,0:32:30.28:0,30,866	0/0:8,0:4:9.43:0,9,54	0/0:22,0:19:30.10:0,30,645	0/1:19,0:18:71.03:71,0,286	0/0:13,0:13:0.43:0,0,1	1/1:22,0:19:32.68:513,33,0	1/1:4,0:11:2.81:25,3,0	0/0:19,0:17:38.63:0,39,767	0/0:16,0:14:26.98:0,27,523	0/0:13,0:12:33.10:0,33,723	0/0:20,0:19:2.35:0,2,143	0/1:14,0:14:33.16:33,0,176	0/0:11,0:7:12.87:0,13,232	0/0:7,0:7:9.03:0,9,150	0/0:30,0:21:15.05:0,15,339	1/1:9,0:8:6.47:51,6,0	1/1:10,0:9:5.70:109,6,0	1/1:5,26:35:2.58:38,3,0	0/0:11,0:11:2.07:0,2,25	0/0:22,0:19:49.68:0,50,787	0/0:17,0:15:42.06:0,42,707	0/0:8,0:8:18.04:0,18,412
chr10	72368073	.	CT	C	2605.78	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.264;DP=617;FS=13.474;HRun=2;HaplotypeScore=60.7213;InbreedingCoeff=0.9995;MQ=82.84;MQ0=0;MQRankSum=-0.701;QD=32.98;ReadPosRankSum=0.850;VQSLOD=2.3854;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1453	0/0:10,0:10:30.10:0,30,448	0/0:23,0:23:66.13:0,66,894	0/0:20,0:20:41.32:0,41,642	0/0:32,0:32:93.29:0,93,1338	0/0:29,0:29:87.26:0,87,1240	0/0:12,0:12:36.10:0,36,518	0/0:37,0:37:99:0,111,1613	0/0:21,0:21:63.21:0,63,940	0/0:28,0:28:84.28:0,84,1244	0/0:19,0:19:57.12:0,57,809	1/1:1,18:19:51.17:662,51,0	1/1:0,18:18:51.07:658,51,0	0/0:23,0:23:69.23:0,69,1011	0/0:28,0:28:84.27:0,84,1237	0/0:22,0:22:66.20:0,66,951	0/0:30,0:30:87.27:0,87,1280	0/0:28,0:28:78.26:0,78,1166	0/0:17,0:17:51.16:0,51,727	0/0:28,0:28:84.28:0,84,1256	0/0:16,0:16:44.97:0,45,632	1/1:0,18:18:54.05:644,54,0	1/1:0,15:15:35.96:467,36,0	1/1:0,9:9:27.09:350,27,0	0/0:18,0:18:54.18:0,54,809	0/0:26,0:26:78.25:0,78,1131	0/0:25,0:25:75.24:0,75,1103	0/0:11,0:11:33.11:0,33,494
chr10	72370114	.	TA	T	4753.94	PASS	AB=0.868;AC=22;AF=0.393;AN=56;BaseQRankSum=12.271;DP=649;FS=4.911;HRun=12;HaplotypeScore=66.2723;InbreedingCoeff=0.8269;MQ=60.63;MQ0=0;MQRankSum=1.915;QD=15.38;ReadPosRankSum=3.310;VQSLOD=5.9609;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,35:40:71.09:729,71,0	0/0:7,0:7:18.04:0,18,183	0/1:8,2:5:31.44:31,0,59	0/0:9,0:2:2.99:0,3,24	0/0:34,1:35:60.92:0,61,786	0/0:17,0:17:24.04:0,24,399	0/0:25,1:26:41.71:0,42,590	0/1:25,3:27:8.13:8,0,413	0/0:25,0:25:41.46:0,41,587	1/1:5,29:34:80.58:615,81,0	1/1:4,9:13:29.88:231,30,0	1/1:1,17:19:46.87:354,47,0	1/1:5,19:24:38.10:399,38,0	0/0:12,0:13:32.89:0,33,314	0/0:21,0:21:53.73:0,54,493	0/0:22,3:25:57.11:0,57,579	1/1:9,23:33:40.89:444,41,0	0/0:26,1:26:33.73:0,34,495	0/0:11,1:13:9.54:0,10,242	0/0:30,0:31:43.37:0,43,562	0/0:22,0:23:44.91:0,45,430	1/1:5,20:25:59.50:446,60,0	1/1:3,22:26:55.64:423,56,0	1/1:4,22:26:65.74:511,66,0	1/1:5,25:31:73.76:563,74,0	0/0:28,2:30:34.67:0,35,702	0/0:27,0:27:61.91:0,62,601	0/0:11,0:11:27.04:0,27,267
chr10	72370961	.	TAC	T	128.15	PASS	AB=0.905;AC=15;AF=0.341;AN=44;BaseQRankSum=1.956;DP=340;FS=7.578;HRun=0;HaplotypeScore=49.7778;InbreedingCoeff=0.0387;MQ=63.63;MQ0=8;MQRankSum=0.659;QD=0.90;ReadPosRankSum=2.107;VQSLOD=0.2149;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:8.81:59,9,0	./.	./.	./.	0/1:14,3:17:17.63:18,0,106	0/0:17,0:17:9.03:0,9,126	0/0:9,0:9:3.01:0,3,44	0/0:18,0:18:0.89:0,1,2	0/0:7,0:6:3.01:0,3,40	0/0:9,0:9:8.24:0,8,79	0/1:6,1:7:17.50:26,0,17	1/1:6,0:6:2.84:14,3,0	./.	./.	0/0:10,0:10:8.52:0,9,96	0/0:9,0:10:5.99:0,6,49	0/1:22,1:23:16.78:17,0,115	1/1:12,1:12:3.01:32,3,0	0/0:14,0:14:1.25:0,1,3	0/0:8,0:8:3.01:0,3,44	0/0:21,1:22:6.02:0,6,87	1/1:4,0:5:1.25:3,1,0	./.	0/1:10,0:10:0:0,0,0	0/1:8,1:9:19.80:20,0,75	0/0:6,0:5:5.69:0,6,46	0/1:12,1:12:19.32:19,0,100	0/1:11,3:14:45.47:45,0,117
chr10	72374288	.	ATT	A	2010.24	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=3.045;DP=521;FS=8.273;HRun=13;HaplotypeScore=69.5346;InbreedingCoeff=0.9447;MQ=68.63;MQ0=8;MQRankSum=1.544;QD=16.21;ReadPosRankSum=3.919;VQSLOD=2.3197;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,22:26:45.70:513,46,0	0/0:5,0:8:20.55:0,21,239	0/0:40,0:15:9.38:0,9,202	0/0:22,0:12:7.23:0,7,53	0/0:20,0:21:49.98:0,50,624	0/0:16,0:16:36.07:0,36,445	0/0:21,0:23:59.68:0,60,810	0/0:23,0:23:42.24:0,42,452	0/0:9,0:9:15.04:0,15,201	1/1:4,10:14:26.97:252,27,0	1/1:9,15:24:20.80:386,21,0	0/0:5,0:17:20.98:0,21,185	0/0:2,0:15:14.96:0,15,133	0/0:11,0:13:35.27:0,35,440	0/0:20,0:20:51.16:0,51,717	0/0:16,0:16:30.10:0,30,433	1/1:8,32:41:44.58:714,45,0	0/0:16,0:16:38.57:0,39,501	0/0:12,0:15:30.05:0,30,379	0/0:17,0:19:44.87:0,45,538	0/0:12,0:12:36.11:0,36,502	0/0:7,0:7:10.83:0,11,88	0/0:8,0:11:14.36:0,14,103	0/0:4,0:22:27.04:0,27,258	1/1:3,13:16:33.03:320,33,0	0/0:15,0:15:39.38:0,39,485	0/0:26,0:25:65.53:0,66,856	0/0:9,0:9:27.05:0,27,349
chr10	72374581	.	GAAT	G	172	PASS	AB=0.949;AC=6;AF=0.143;AN=42;BaseQRankSum=3.183;DP=213;FS=5.221;HRun=0;HaplotypeScore=30.2614;InbreedingCoeff=0.1755;MQ=72.05;MQ0=1;MQRankSum=0.376;QD=3.07;ReadPosRankSum=-0.214;VQSLOD=0.5065;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,8:12:18.02:217,18,0	0/0:3,0:3:6.01:0,6,84	./.	./.	0/0:8,0:8:3.01:0,3,57	0/0:7,0:7:15.05:0,15,284	0/0:7,0:7:6.02:0,6,115	./.	1/1:6,0:6:3.01:39,3,0	0/0:4,0:4:3.01:0,3,52	./.	0/0:8,0:7:6.02:0,6,115	0/0:5,0:5:3.01:0,3,38	./.	0/0:9,0:9:12.04:0,12,220	0/0:5,0:5:3.01:0,3,57	0/1:20,1:21:6.15:6,0,482	0/0:8,0:8:9.03:0,9,172	0/0:6,0:6:3.01:0,3,57	./.	0/0:5,0:5:6.02:0,6,114	0/0:3,0:4:3.01:0,3,39	0/0:0,0:1:3.01:0,3,39	./.	0/0:8,0:8:15.05:0,15,286	0/0:4,0:4:3.01:0,3,57	0/0:15,0:15:9.03:0,9,171	0/1:16,1:17:18.16:18,0,321
chr10	72380685	.	T	TA	528.34	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.093;DP=465;FS=0.896;HRun=8;HaplotypeScore=40.9472;InbreedingCoeff=0.8984;MQ=70.90;MQ0=0;MQRankSum=-0.598;QD=27.81;ReadPosRankSum=1.447;VQSLOD=3.8905;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.03:0,72,659	0/0:7,0:7:21.01:0,21,192	0/0:10,0:9:12.13:0,12,124	0/0:5,0:5:9:0,9,82	0/0:28,0:28:84.05:0,84,768	0/0:11,0:11:27.01:0,27,247	0/0:7,0:7:18:0,18,165	0/0:26,0:26:66.02:0,66,600	0/0:11,0:11:33.02:0,33,302	0/0:25,0:25:69.04:0,69,631	0/0:20,0:21:62.07:0,62,555	0/0:20,0:20:54:0,54,488	0/0:15,0:15:42.01:0,42,384	0/0:11,0:11:32.81:0,33,288	0/0:16,0:16:45.02:0,45,411	0/0:16,0:16:45.02:0,45,412	0/0:26,0:26:63:0,63,569	1/1:0,19:19:54.16:623,54,0	0/0:16,0:16:42.01:0,42,379	0/0:23,0:23:66.02:0,66,599	0/0:7,0:7:21.01:0,21,192	0/0:8,0:8:21.01:0,21,192	0/0:16,0:16:45.02:0,45,412	0/0:11,0:11:33.02:0,33,302	0/0:28,0:28:78.04:0,78,714	0/0:24,0:24:66.03:0,66,600	0/0:24,0:23:57.02:0,57,522	0/0:8,0:8:24.01:0,24,220
chr10	72381941	.	A	AAC	752.05	PASS	AB=0.971;AC=24;AF=0.500;AN=48;BaseQRankSum=0.259;DP=466;FS=3.536;HRun=0;HaplotypeScore=83.2906;InbreedingCoeff=0.4959;MQ=65.25;MQ0=10;MQRankSum=-1.285;QD=3.48;ReadPosRankSum=-1.249;VQSLOD=1.8390;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:4.77:35,0,5	1/1:7,3:11:6.02:89,6,0	./.	./.	0/0:22,0:24:14.85:0,15,135	0/0:17,0:19:5.85:0,6,46	0/0:7,0:6:3.01:0,3,32	./.	0/0:10,0:10:3:0,3,32	1/1:18,0:18:17.15:120,17,0	1/1:14,1:18:0.47:2,0,0	1/1:9,4:13:9.03:133,9,0	1/1:7,3:16:6:52,6,0	0/0:19,0:19:17.85:0,18,159	0/0:23,0:21:18.04:0,18,193	0/1:11,1:16:29.55:30,0,78	1/1:21,0:20:8.97:72,9,0	1/1:7,0:13:4.25:29,4,0	1/1:11,0:10:0.47:1,0,0	0/0:15,0:15:3.01:0,3,32	0/0:23,0:24:17.86:0,18,168	1/1:7,0:7:3.01:38,3,0	1/1:16,3:19:3.01:44,3,0	1/1:13,9:24:18.05:262,18,0	0/0:18,0:20:0.32:0,0,1	0/0:13,0:13:6.01:0,6,59	0/0:18,0:18:5.97:0,6,64	./.
chr10	72387437	.	A	AT	3056.31	PASS	AB=0.929;AC=11;AF=0.196;AN=56;BaseQRankSum=-7.181;DP=530;FS=0.859;HRun=9;HaplotypeScore=57.6868;InbreedingCoeff=0.8522;MQ=64.84;MQ0=1;MQRankSum=2.303;QD=21.83;ReadPosRankSum=3.649;VQSLOD=4.3845;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,39:42:99:1133,104,0	0/0:6,0:6:14.95:0,15,124	0/0:18,0:13:14.67:0,15,156	0/0:12,0:10:10.81:0,11,82	0/0:19,0:19:47.97:0,48,417	0/0:19,1:20:20.85:0,21,409	0/0:21,0:21:36.35:0,36,402	0/0:27,0:27:62.96:0,63,543	0/0:23,0:23:41.96:0,42,364	1/1:7,13:20:36.10:398,36,0	1/1:2,19:21:60.16:659,60,0	0/0:18,0:18:53.99:0,54,469	0/0:12,0:12:26.98:0,27,231	0/0:15,0:15:32.97:0,33,286	0/1:12,1:13:6.20:6,0,181	0/0:15,1:15:2.80:0,3,253	1/1:9,21:30:40.55:671,41,0	0/0:25,0:25:56.98:0,57,495	0/0:27,0:26:59.93:0,60,512	0/0:16,0:16:41.94:0,42,352	0/0:16,0:16:32.98:0,33,286	0/0:13,0:13:32.49:0,32,286	0/0:15,0:15:35.97:0,36,308	0/0:19,0:19:34.51:0,35,332	1/1:1,13:14:33.09:365,33,0	0/0:26,0:26:71.95:0,72,620	0/0:21,0:21:38.95:0,39,338	0/0:5,0:5:15:0,15,130
chr10	72387606	.	A	AGAGGGAACATAAACTAGGCTAGC	3573.46	PASS	AB=0.833;AC=43;AF=0.977;AN=44;BaseQRankSum=-1.466;DP=52;FS=0.000;HRun=0;HaplotypeScore=33.2478;InbreedingCoeff=-0.1747;MQ=123.99;MQ0=0;MQRankSum=-0.933;QD=72.93;ReadPosRankSum=-0.755;VQSLOD=2.3013;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:2.99:23,3,0	./.	1/1:3,1:6:18.04:1090,18,0	0/1:4,0:5:11.48:417,0,11	./.	1/1:3,0:3:3:25,3,0	1/1:2,0:3:9.03:290,9,0	1/1:3,0:3:6.01:102,6,0	./.	1/1:1,0:1:3.01:41,3,0	1/1:2,0:2:6:124,6,0	1/1:1,0:1:3.01:73,3,0	1/1:3,0:3:3.01:74,3,0	1/1:1,0:1:3.01:186,3,0	1/1:2,0:2:3.01:50,3,0	1/1:2,0:2:3.01:51,3,0	1/1:2,0:2:3.01:86,3,0	./.	1/1:1,0:1:3.01:122,3,0	./.	1/1:3,0:3:6.02:109,6,0	1/1:2,0:2:6.02:173,6,0	1/1:2,0:2:6.02:182,6,0	./.	1/1:2,0:2:6.02:182,6,0	1/1:1,0:1:3.01:42,3,0	1/1:1,0:1:3.01:49,3,0	1/1:1,0:1:3.01:84,3,0
chr10	72387688	.	G	GAA	2234.04	PASS	AB=0.704;AC=19;AF=0.339;AN=56;BaseQRankSum=0.571;DP=320;FS=2.418;HRun=11;HaplotypeScore=49.6577;InbreedingCoeff=0.7603;MQ=50.56;MQ0=3;MQRankSum=-0.169;QD=16.55;ReadPosRankSum=1.416;VQSLOD=1.9350;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,13:21:12:451,12,0	0/0:3,0:3:9.01:0,9,87	0/0:5,0:3:8.91:0,9,74	0/0:8,0:7:18.01:0,18,167	0/0:13,0:13:36.04:0,36,349	0/0:11,0:11:23.96:0,24,233	0/0:12,0:13:32.78:0,33,302	0/0:20,0:21:59.83:0,60,565	0/0:6,0:7:8.92:0,9,137	0/1:1,0:11:0.09:89,0,0	1/1:2,0:11:18.35:62,18,0	1/1:3,10:15:35.09:442,35,0	1/1:2,2:5:11.53:136,12,0	0/0:10,0:12:11.63:0,12,148	0/0:17,0:17:41.97:0,42,407	0/0:12,0:12:36.06:0,36,349	1/1:4,0:13:9.54:79,10,0	0/1:8,0:7:5.25:5,0,101	0/0:8,0:7:18.02:0,18,175	0/0:13,0:13:33.03:0,33,320	0/0:5,0:5:15.02:0,15,145	1/1:6,10:17:27.09:391,27,0	1/1:1,14:16:38.62:530,39,0	0/1:3,7:9:11.01:199,0,11	1/1:0,0:7:14.97:51,15,0	0/0:17,0:17:48.05:0,48,466	0/0:14,0:17:46.26:0,46,423	0/0:3,0:3:8.97:0,9,78
chr10	72392023	.	CCAAA	C	583.46	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.996;DP=741;FS=0.000;HRun=0;HaplotypeScore=115.5764;InbreedingCoeff=0.9998;MQ=70.49;MQ0=0;MQRankSum=-0.226;QD=32.41;ReadPosRankSum=0.972;VQSLOD=3.2600;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.24:0,84,1921	0/0:12,0:12:36.11:0,36,864	0/0:26,0:26:63.21:0,63,1438	0/0:29,0:29:66.20:0,66,1333	0/0:32,0:32:87.30:0,87,2181	0/0:19,0:19:45.14:0,45,1066	0/0:28,0:28:69.22:0,69,1695	0/0:31,0:31:68.96:0,69,1656	0/0:29,0:29:78.24:0,78,1856	0/0:28,0:28:72.20:0,72,1772	0/0:21,0:21:51.18:0,51,1289	0/0:32,0:32:90.31:0,90,2283	0/0:30,0:30:84.27:0,84,2077	0/0:22,0:22:57.17:0,57,1394	0/0:33,0:33:96.30:0,96,2336	0/0:37,0:37:93.31:0,93,2296	0/0:37,0:37:90.24:0,90,2220	1/1:1,17:18:39.13:678,39,0	0/0:21,0:21:57.19:0,57,1399	0/0:27,0:27:66.23:0,66,1674	0/0:28,0:28:84.29:0,84,2129	0/0:30,0:30:81.28:0,81,2041	0/0:25,0:25:69.24:0,69,1741	0/0:25,0:25:66.23:0,66,1677	0/0:22,0:22:63.22:0,63,1574	0/0:21,0:21:54.16:0,54,1318	0/0:31,0:31:75.23:0,75,1796	0/0:17,0:17:51.18:0,51,1291
chr10	72392613	.	T	TTA	730.04	PASS	AB=0.864;AC=12;AF=0.250;AN=48;BaseQRankSum=-5.388;DP=242;FS=0.000;HRun=0;HaplotypeScore=35.0773;InbreedingCoeff=0.3493;MQ=77.70;MQ0=4;MQRankSum=1.116;QD=9.73;ReadPosRankSum=0.472;VQSLOD=2.8865;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:6:11.96:12,0,18	0/1:4,1:5:32.54:33,0,115	0/1:21,0:9:0:0,0,0	0/0:37,0:14:5.81:0,6,48	0/0:8,0:8:3.01:0,3,36	0/0:2,0:10:19.89:0,20,98	./.	0/0:32,0:32:45.80:0,46,469	0/0:2,0:2:3.01:0,3,36	1/1:4,3:7:9.03:140,9,0	1/1:5,1:6:3.01:48,3,0	0/0:3,0:3:0.89:0,1,2	0/0:5,0:6:5.84:0,6,40	./.	0/0:5,0:5:6.02:0,6,71	0/0:2,0:3:5.85:0,6,50	0/1:7,11:18:2.44:442,0,2	0/0:16,0:16:16.81:0,17,84	0/0:9,0:9:9.03:0,9,107	0/0:6,0:6:9.03:0,9,107	0/0:4,0:4:6.02:0,6,71	./.	0/0:3,0:3:2.74:0,3,12	./.	1/1:4,5:9:9.03:143,9,0	1/1:3,0:3:3.01:45,3,0	0/0:5,0:5:2.68:0,3,11	0/0:8,0:10:23.90:0,24,257
chr10	72392617	.	ATATATATATATATATATG	A	808.33	PASS	AC=2;AF=0.042;AN=48;BaseQRankSum=3.979;DP=228;FS=0.000;HRun=0;HaplotypeScore=95.5999;InbreedingCoeff=0.3703;MQ=76.30;MQ0=6;MQRankSum=-2.644;QD=50.52;ReadPosRankSum=1.947;VQSLOD=2.7690;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:9.03:0,9,398	0/0:5,0:5:15.05:0,15,1082	0/0:20,0:8:0.67:0,1,2	0/0:41,0:15:18.96:0,19,337	0/0:7,0:7:5.81:0,6,385	0/0:10,0:10:21.07:0,21,1337	./.	0/0:31,0:31:69.24:0,69,3865	0/0:1,0:1:3.01:0,3,258	0/0:5,0:5:9.03:0,9,527	0/0:5,0:5:6.01:0,6,261	0/0:3,0:3:5.85:0,6,82	0/0:5,0:5:8.86:0,9,299	./.	0/0:4,0:4:6.02:0,6,373	0/0:4,0:4:9.03:0,9,616	0/0:18,0:18:39.13:0,39,2712	1/1:1,15:16:17.64:896,18,0	0/0:8,0:8:15.05:0,15,948	0/0:5,0:5:9.03:0,9,713	0/0:4,0:4:9.03:0,9,448	./.	0/0:1,0:1:3.01:0,3,142	./.	0/0:7,0:7:12.04:0,12,916	0/0:2,0:2:6.01:0,6,81	0/0:5,0:5:6.02:0,6,240	0/0:11,0:10:24.08:0,24,1557
chr10	72394714	.	TG	T	4538.13	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.531;DP=756;FS=1.592;HRun=3;HaplotypeScore=75.6501;InbreedingCoeff=0.9988;MQ=87.07;MQ0=0;MQRankSum=-4.081;QD=33.13;ReadPosRankSum=1.316;VQSLOD=5.3973;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,169,2419	0/0:9,0:9:27.09:0,27,388	0/0:31,0:31:84.24:0,84,1142	0/0:25,0:25:45.66:0,46,874	0/0:30,0:30:87.28:0,87,1232	0/0:16,0:16:48.16:0,48,691	0/0:22,0:22:57.19:0,57,820	0/0:32,0:32:90.29:0,90,1264	0/0:24,0:24:72.23:0,72,1018	0/0:37,0:37:99:0,102,1454	0/0:20,0:20:57.19:0,57,820	1/1:1,18:19:51.16:632,51,0	1/1:2,28:30:81.25:1004,81,0	0/0:29,0:29:84.28:0,84,1210	0/0:32,0:32:96.28:0,96,1324	0/0:23,0:23:66.22:0,66,949	0/0:24,0:24:66.18:0,66,927	0/0:25,0:25:75.25:0,75,1080	0/0:32,0:32:90.29:0,90,1267	0/0:33,0:33:96.32:0,96,1381	0/0:36,0:36:99:0,108,1472	1/1:1,22:23:51.16:632,51,0	1/1:1,19:20:51.16:633,51,0	1/1:0,45:45:99:1636,132,0	0/0:32,0:32:96.30:0,96,1362	0/0:23,0:23:66.22:0,66,951	0/0:21,0:21:63.20:0,63,888	0/0:7,0:7:21.04:0,21,280
chr10	72395462	.	G	GT	579.64	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.222;DP=723;FS=0.996;HRun=1;HaplotypeScore=68.2375;InbreedingCoeff=0.9994;MQ=86.45;MQ0=0;MQRankSum=-1.848;QD=34.10;ReadPosRankSum=3.483;VQSLOD=3.5862;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,1772	0/0:13,0:13:36.10:0,36,453	0/0:25,0:25:72.20:0,72,890	0/0:28,0:28:74.76:0,75,905	0/0:36,0:36:99:0,105,1344	0/0:32,0:32:96.31:0,96,1246	0/0:12,0:12:33.11:0,33,429	0/0:32,0:32:87.27:0,87,1117	0/0:17,0:17:51.17:0,51,661	0/0:35,0:35:99:0,105,1350	0/0:22,0:22:63.18:0,63,789	0/0:23,0:23:69.22:0,69,895	0/0:16,0:16:48.13:0,48,594	0/0:23,0:23:60.19:0,60,778	0/0:26,0:26:75.24:0,75,965	0/0:22,0:22:66.20:0,66,843	0/0:19,0:19:54.18:0,54,701	1/1:2,15:17:45.15:675,45,0	0/0:15,0:15:45.15:0,45,584	0/0:45,0:45:99:0,135,1721	0/0:49,0:49:99:0,144,1855	0/0:30,0:30:87.28:0,87,1129	0/0:22,0:22:66.21:0,66,856	0/0:28,0:28:81.26:0,81,1052	0/0:15,0:15:45.14:0,45,571	0/0:35,0:35:99:0,105,1363	0/0:28,0:28:84.26:0,84,1072	0/0:12,0:12:36.12:0,36,466
chr10	72397463	.	T	TA	625.73	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=0.771;DP=405;FS=1.513;HRun=10;HaplotypeScore=69.3473;InbreedingCoeff=0.7168;MQ=76.17;MQ0=5;MQRankSum=-2.763;QD=8.02;ReadPosRankSum=-1.761;VQSLOD=1.8438;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:15.87:183,16,0	0/1:3,0:3:0:0,0,0	0/0:46,0:25:56.34:0,56,329	0/0:40,0:17:9.73:0,10,68	0/0:18,0:18:19.12:0,19,161	0/1:9,0:9:10.81:11,0,55	0/0:11,0:10:12.66:0,13,135	0/0:16,0:15:20.91:0,21,163	0/0:5,0:5:8.96:0,9,74	0/0:15,0:15:28.75:0,29,165	0/0:11,0:11:22.90:0,23,122	1/1:4,10:15:23.18:223,23,0	1/1:4,3:7:5.91:49,6,0	0/0:10,0:10:8.93:0,9,71	0/0:9,3:12:7.01:0,7,145	0/0:12,0:12:4.25:0,4,152	0/0:20,0:20:40.33:0,40,220	1/1:8,3:9:4.79:47,5,0	0/0:19,0:20:20.99:0,21,286	0/0:11,0:11:8.90:0,9,65	0/0:6,0:6:11.92:0,12,90	1/1:1,1:2:3.01:32,3,0	1/1:1,3:4:8.77:64,9,0	1/1:0,6:6:18.05:192,18,0	0/0:21,0:21:31.55:0,32,183	0/0:11,0:11:20.81:0,21,157	0/0:20,0:22:43.32:0,43,348	0/0:19,0:20:43.92:0,44,349
chr10	72397473	.	AG	A	1362.95	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=3.028;DP=414;FS=1.158;HRun=10;HaplotypeScore=58.8184;InbreedingCoeff=0.7532;MQ=76.44;MQ0=4;MQRankSum=-0.647;QD=12.28;ReadPosRankSum=-0.115;VQSLOD=3.1174;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,8:23:48.65:334,49,0	0/0:5,0:5:8.99:0,9,81	0/0:44,1:23:21.69:0,22,160	0/0:41,0:18:5.67:0,6,68	0/0:16,0:16:29.81:0,30,274	0/0:10,0:10:20.91:0,21,172	0/0:9,0:9:26.89:0,27,269	0/1:12,0:10:8.80:9,0,109	0/0:7,0:7:21.03:0,21,213	1/1:2,16:18:44.38:349,44,0	1/1:7,8:15:24.63:304,25,0	0/0:12,0:12:22.94:0,23,173	0/0:7,0:8:17.81:0,18,142	0/0:9,0:9:17.98:0,18,162	0/0:12,0:12:21.04:0,21,219	0/0:14,0:14:30.02:0,30,304	1/1:3,21:24:38.99:338,39,0	0/0:8,0:7:6.21:0,6,66	0/0:23,0:23:6.24:0,6,352	0/0:10,0:10:8.98:0,9,73	0/0:8,0:8:8.96:0,9,81	0/0:2,0:2:5.97:0,6,45	0/0:5,0:5:5.98:0,6,47	0/0:6,0:6:17.90:0,18,134	1/1:5,14:19:23.07:204,23,0	0/0:10,0:10:12.03:0,12,125	0/0:22,0:22:54.08:0,54,555	0/0:19,0:19:43.94:0,44,479
chr10	72399234	.	TTTTTG	T	2526.65	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.222;DP=609;FS=3.465;HRun=0;HaplotypeScore=123.5883;InbreedingCoeff=0.9931;MQ=64.22;MQ0=5;MQRankSum=-6.180;QD=26.32;ReadPosRankSum=-0.099;VQSLOD=3.5604;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:72.25:0,72,1916	0/0:10,0:9:24.08:0,24,697	0/0:26,0:15:26.88:0,27,469	0/0:31,0:17:30.07:0,30,533	0/0:40,0:40:99:0,99,2677	0/0:20,0:20:54.17:0,54,1506	0/0:14,0:14:30.10:0,30,824	0/0:29,0:28:60.20:0,60,1525	0/0:20,0:20:54.18:0,54,1453	1/1:9,16:25:48.16:878,48,0	1/1:7,15:22:39.02:600,39,0	0/0:18,0:18:42.14:0,42,1131	0/0:9,0:9:24.08:0,24,676	0/0:17,0:17:45.15:0,45,1223	0/0:17,0:17:39.13:0,39,1063	0/0:13,0:13:39.13:0,39,966	1/1:7,17:24:24.08:461,24,0	0/0:12,0:11:15.05:0,15,366	0/0:20,0:20:39.13:0,39,1022	0/0:23,0:23:60.20:0,60,1658	0/0:12,0:12:33.11:0,33,845	0/0:18,0:18:42.14:0,42,1078	0/0:18,0:18:48.16:0,48,1346	0/0:30,0:30:78.27:0,78,2047	1/1:6,19:25:39.13:748,39,0	0/0:29,0:28:78.27:0,78,2178	0/0:21,0:21:54.19:0,54,1447	0/0:34,0:34:75.25:0,75,2167
chr10	72399854	.	AGTGCCTCGCAACT	A	5431.36	PASS	AB=0.972;AC=9;AF=0.161;AN=56;BaseQRankSum=11.452;DP=648;FS=2.488;HRun=0;HaplotypeScore=230.1660;InbreedingCoeff=0.8627;MQ=83.00;MQ0=2;MQRankSum=-8.601;QD=51.24;ReadPosRankSum=0.854;VQSLOD=4.3227;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,160,9566	0/0:10,0:10:27.09:0,27,1479	0/0:25,0:23:66.17:0,66,3491	0/0:27,0:25:72.25:0,72,3471	0/0:32,0:32:96.32:0,96,5417	0/0:22,0:22:63.22:0,63,3826	0/0:32,0:32:96.33:0,96,5714	0/0:40,0:40:99:0,117,6643	0/0:22,0:22:63.22:0,63,3940	1/1:0,21:21:57.18:1891,57,0	1/1:0,18:18:45.07:1442,45,0	0/0:21,0:20:60.19:0,60,3181	0/0:15,0:15:42.14:0,42,2270	0/0:20,0:20:57.20:0,57,3410	0/0:23,0:23:66.23:0,66,3917	0/0:24,0:24:72.25:0,72,4424	1/1:0,14:14:15.01:504,15,0	0/0:11,0:11:33.11:0,33,1955	0/0:23,0:23:69.23:0,69,3803	0/0:19,0:19:54.19:0,54,2968	0/0:42,0:42:99:0,126,7642	0/0:24,0:24:66.23:0,66,4051	0/0:16,0:16:48.16:0,48,2904	0/0:19,0:19:57.20:0,57,3528	1/1:1,17:18:39.13:1573,39,0	0/1:34,1:35:21.70:22,0,5505	0/0:15,0:15:45.15:0,45,2760	0/0:7,0:7:21.07:0,21,1244
chr10	72400034	.	T	TTCA	7890.11	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-10.671;DP=735;FS=4.389;HRun=0;HaplotypeScore=100.7037;InbreedingCoeff=0.9950;MQ=90.43;MQ0=0;MQRankSum=-2.842;QD=55.56;ReadPosRankSum=2.399;VQSLOD=6.6436;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:33:78.27:1741,78,0	0/0:7,0:7:21.07:0,21,343	0/0:35,0:35:96.33:0,96,1557	0/0:23,0:23:47.50:0,47,700	0/0:41,0:41:99:0,117,1905	0/0:37,0:37:90.29:0,90,1443	0/0:26,0:26:78.24:0,78,1218	0/0:45,0:45:99:0,111,1792	0/0:20,0:20:60.20:0,60,978	1/1:2,28:32:87.28:1878,87,0	1/1:0,25:28:72.25:1593,72,0	0/0:22,0:22:63.20:0,63,1003	0/0:22,0:22:66.21:0,66,1054	0/0:20,0:20:57.19:0,57,931	0/0:32,0:32:93.32:0,93,1498	0/0:38,0:38:99:0,108,1717	1/1:3,11:14:30.10:670,30,0	1/1:0,9:9:27.09:602,27,0	0/0:21,0:21:63.22:0,63,1027	0/0:37,0:37:99:0,105,1715	0/0:22,0:22:63.22:0,63,1029	0/0:31,0:31:87.30:0,87,1419	0/0:27,0:27:78.25:0,78,1249	0/0:28,0:28:78.27:0,78,1274	1/1:5,21:26:63.22:1406,63,0	0/0:28,1:29:14.23:0,14,1205	0/0:17,0:17:51.17:0,51,833	0/0:13,0:13:39.13:0,39,637
chr10	72400596	.	C	CA	5637.54	PASS	AB=0.929;AC=11;AF=0.196;AN=56;BaseQRankSum=-0.331;DP=582;FS=3.778;HRun=1;HaplotypeScore=89.5941;InbreedingCoeff=0.8932;MQ=76.90;MQ0=0;MQRankSum=-7.819;QD=34.38;ReadPosRankSum=0.063;VQSLOD=4.6533;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:31:75.25:1116,75,0	0/0:15,0:15:45.15:0,45,583	0/0:11,0:11:33.09:0,33,393	0/0:15,0:15:38.46:0,38,436	0/0:11,0:11:30.10:0,30,389	0/0:18,0:17:54.16:0,54,687	0/0:19,0:19:51.17:0,51,662	0/0:23,0:23:60.19:0,60,779	0/0:13,0:13:39.13:0,39,506	1/1:1,36:37:99:1658,111,0	1/1:1,18:19:48.16:719,48,0	0/0:18,0:18:48.16:0,48,623	0/0:19,0:19:54.18:0,54,701	0/0:19,0:19:54.18:0,54,700	0/0:32,0:32:96.31:0,96,1247	0/0:26,0:25:75.23:0,75,960	1/1:0,28:28:78.22:1144,78,0	0/0:21,0:21:63.20:0,63,814	0/0:26,0:26:66.21:0,66,853	0/0:23,0:23:66.20:0,66,842	0/0:25,0:25:69.22:0,69,896	0/0:12,0:12:33.11:0,33,428	0/0:17,0:17:45.13:0,45,570	0/0:13,0:13:39.13:0,39,506	1/1:0,23:23:66.22:989,66,0	0/1:24,2:26:11.71:12,0,856	0/0:28,0:28:84.27:0,84,1089	0/0:14,0:14:30.08:0,30,373
chr10	72400624	.	G	GA	4837.95	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=0.225;DP=580;FS=1.251;HRun=2;HaplotypeScore=86.4804;InbreedingCoeff=0.9996;MQ=87.51;MQ0=0;MQRankSum=-1.792;QD=38.70;ReadPosRankSum=2.419;VQSLOD=5.3842;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:87.27:0,87,1078	0/0:16,0:16:45.11:0,45,542	0/0:21,0:21:53.62:0,54,614	0/0:24,0:24:63.13:0,63,736	0/0:13,0:13:39.07:0,39,445	1/1:1,18:18:54.18:778,54,0	1/1:2,21:23:54.18:778,54,0	0/0:27,0:27:78.20:0,78,921	0/0:12,0:12:36.11:0,36,446	0/0:24,0:24:69.21:0,69,846	0/0:14,0:14:39.12:0,39,483	1/1:0,19:19:54.18:778,54,0	1/1:1,19:20:54.18:777,54,0	0/0:19,0:19:57.16:0,57,693	0/0:30,0:30:84.26:0,84,1041	0/0:31,0:30:90.27:0,90,1102	0/0:21,0:21:60.19:0,60,743	0/0:20,0:20:60.16:0,60,728	0/0:25,0:25:75.23:0,75,918	0/0:23,0:23:63.20:0,63,781	0/0:21,0:21:60.19:0,60,743	1/1:0,9:9:27.09:389,27,0	1/1:1,18:19:48.16:691,48,0	1/1:1,15:16:45.15:648,45,0	0/0:19,0:19:47.98:0,48,571	0/0:21,0:21:63.17:0,63,758	0/0:29,0:29:78.24:0,78,967	0/0:9,0:9:27.08:0,27,335
chr10	72401172	.	GATCT	G	8444.19	PASS	AB=0.931;AC=23;AF=0.411;AN=56;BaseQRankSum=16.355;DP=541;FS=10.610;HRun=0;HaplotypeScore=111.4881;InbreedingCoeff=0.9245;MQ=88.06;MQ0=0;MQRankSum=-5.298;QD=39.64;ReadPosRankSum=5.257;VQSLOD=4.8396;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:72.23:1334,72,0	0/0:6,0:6:18.06:0,18,520	0/0:24,0:24:69.22:0,69,1756	0/0:27,0:25:69.60:0,70,1815	0/0:26,0:26:75.24:0,75,2056	0/0:17,0:17:48.15:0,48,1325	0/0:22,0:22:66.21:0,66,1850	0/0:26,0:26:75.25:0,75,2020	0/0:15,0:15:42.13:0,42,1152	1/1:0,16:16:41.59:763,42,0	1/1:0,9:9:24.08:456,24,0	1/1:2,16:18:42.14:792,42,0	1/1:1,11:12:30.10:570,30,0	0/0:13,0:13:39.12:0,39,1066	0/0:24,0:24:72.25:0,72,2085	0/0:12,0:12:36.11:0,36,979	1/1:2,16:19:42.10:797,42,0	1/1:2,16:18:45.15:854,45,0	0/0:16,0:16:48.16:0,48,1289	0/0:26,0:26:78.25:0,78,2105	0/0:31,0:31:93.30:0,93,2585	1/1:1,13:14:26.59:512,27,0	1/1:1,12:13:29.60:568,30,0	1/1:0,23:23:57.19:1082,57,0	1/1:3,14:17:36.12:683,36,0	0/1:25,2:27:32.45:32,0,2052	0/0:29,0:27:87.30:0,87,2469	0/0:14,0:14:42.14:0,42,1210
chr10	72402146	.	GCA	G	180.81	PASS	AB=0.991;AC=12;AF=0.222;AN=54;BaseQRankSum=4.418;DP=420;FS=32.986;HRun=0;HaplotypeScore=97.9979;InbreedingCoeff=0.5135;MQ=51.13;MQ0=18;MQRankSum=-2.993;QD=1.34;ReadPosRankSum=-0.098;VQSLOD=0.1117;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:17:5.92:39,6,0	0/0:10,0:10:15.05:0,15,243	0/0:16,0:8:18.02:0,18,196	0/0:19,0:9:1.71:0,2,83	0/0:12,0:12:12.03:0,12,172	0/0:14,0:14:16.93:0,17,373	0/0:23,0:22:39.10:0,39,562	0/0:10,0:8:18.05:0,18,234	0/0:12,0:12:11.73:0,12,198	0/1:26,1:26:41.55:42,0,43	0/1:22,0:21:0.12:2,0,0	0/0:19,0:19:6.99:0,7,36	./.	0/0:19,0:19:18.06:0,18,276	0/0:18,0:16:20.96:0,21,256	0/0:12,0:12:15.19:0,15,152	0/0:26,0:26:9.02:0,9,27	1/1:2,10:10:12.04:145,12,0	0/0:11,0:10:23.75:0,24,336	0/0:11,0:11:6.01:0,6,77	0/0:17,0:16:29.93:0,30,452	0/1:6,0:6:0.22:0,0,1	1/1:13,0:12:0.31:33,0,0	1/1:11,0:9:3.49:37,3,0	0/1:25,0:25:2.67:20,0,3	0/0:12,0:10:26.78:0,27,360	0/0:14,0:14:30.01:0,30,317	0/0:8,0:8:9.48:0,9,102
chr10	72402389	.	TA	T	1725.71	PASS	AB=0.888;AC=23;AF=0.411;AN=56;BaseQRankSum=10.811;DP=551;FS=5.966;HRun=13;HaplotypeScore=72.7757;InbreedingCoeff=0.6201;MQ=71.05;MQ0=1;MQRankSum=0.181;QD=6.28;ReadPosRankSum=4.181;VQSLOD=2.4630;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:19:43.74:312,44,0	0/0:9,0:9:12.02:0,12,116	0/1:20,1:17:13.37:13,0,126	0/1:19,0:14:9.13:9,0,55	0/1:23,6:31:64.20:64,0,229	0/0:23,1:24:33:0,33,458	0/0:17,0:18:44.64:0,45,400	0/0:29,3:32:13.05:0,13,440	0/0:17,1:19:16.33:0,16,282	1/1:7,13:20:22.75:265,23,0	1/1:5,16:22:11.56:239,12,0	1/1:3,0:16:3.35:46,3,0	1/1:2,1:22:25.93:93,26,0	0/0:18,1:20:33.10:0,33,416	0/0:25,0:25:66.04:0,66,611	0/0:21,0:22:56.92:0,57,536	0/1:9,9:18:19.79:164,0,20	0/1:25,0:25:1.47:315,0,1	0/0:14,0:15:14.02:0,14,234	0/0:15,1:16:8.13:0,8,236	0/0:16,0:16:36.06:0,36,349	1/1:6,0:14:17.34:50,17,0	1/1:2,0:11:16.28:47,16,0	1/1:1,0:19:32.59:94,33,0	1/1:6,11:17:29.75:219,30,0	0/0:20,0:20:34.23:0,34,306	0/0:21,0:22:23.29:0,23,395	0/0:15,0:16:35.89:0,36,335
chr10	72402960	.	GT	G	2938.53	PASS	AB=0.600;AC=21;AF=0.375;AN=56;BaseQRankSum=14.403;DP=544;FS=4.684;HRun=12;HaplotypeScore=74.9937;InbreedingCoeff=0.9326;MQ=63.32;MQ0=0;MQRankSum=-1.862;QD=12.45;ReadPosRankSum=4.009;VQSLOD=3.8853;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,31:37:88.59:672,89,0	0/0:5,0:6:14.86:0,15,136	0/0:9,0:9:16.18:0,16,121	0/0:8,0:7:12.65:0,13,93	0/0:17,1:20:24.65:0,25,406	0/0:19,0:20:56.88:0,57,533	0/0:14,1:15:21.84:0,22,397	0/0:36,1:37:54.91:0,55,732	0/0:12,0:12:36.06:0,36,359	1/1:2,18:21:52.19:376,52,0	1/1:5,16:22:47.37:354,47,0	1/1:3,0:18:28.51:82,29,0	1/1:1,0:22:40.74:118,41,0	0/0:16,1:17:27.87:0,28,464	0/0:19,1:20:21.85:0,22,398	0/0:17,0:17:45.08:0,45,447	1/1:3,26:30:70.76:540,71,0	1/1:1,11:13:31.92:238,32,0	0/0:20,0:20:53.94:0,54,507	0/0:26,1:28:42.81:0,43,590	0/0:7,0:7:21.02:0,21,206	0/1:4,0:12:4.62:28,0,5	1/1:2,0:17:28.51:82,29,0	1/1:0,0:10:20.37:59,20,0	1/1:4,29:34:79.70:610,80,0	0/0:33,1:34:63.91:0,64,815	0/0:27,0:27:60.09:0,60,596	0/0:7,0:9:26.72:0,27,242
chr10	72403979	.	ACACACACG	A	656.73	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.340;DP=700;FS=9.292;HRun=0;HaplotypeScore=202.2532;InbreedingCoeff=0.6951;MQ=62.87;MQ0=0;MQRankSum=-4.254;QD=24.32;ReadPosRankSum=1.670;VQSLOD=2.2707;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,123,1165	0/0:9,0:9:27.07:0,27,980	0/0:25,0:22:66.21:0,66,2167	0/0:28,0:26:62.33:0,62,1813	0/0:19,0:19:51.12:0,51,1853	0/0:29,0:29:81.18:0,81,2871	0/0:29,0:29:84.16:0,84,2485	0/0:19,0:19:57.15:0,57,1778	0/0:30,0:30:87.21:0,87,3080	0/0:21,0:21:60.08:0,60,665	0/0:8,0:8:17.79:0,18,244	0/0:23,0:23:66.08:0,66,743	0/0:29,0:29:66.04:0,66,665	0/0:32,0:32:96.13:0,96,2937	0/0:21,0:21:60.16:0,60,2311	0/0:21,0:21:63.12:0,63,2055	0/0:39,0:39:96.06:0,96,929	1/1:1,26:27:1.53:733,2,0	0/0:37,0:36:99:0,103,3456	0/0:10,0:10:30:0,30,783	0/0:59,0:59:99:0,174,6330	0/0:15,0:15:36:0,36,330	0/0:14,0:14:26.92:0,27,250	0/0:37,0:37:96.07:0,96,927	0/0:22,0:22:60.09:0,60,626	0/0:23,0:23:69.19:0,69,2332	0/0:21,0:21:63.15:0,63,2041	0/0:4,0:4:12.04:0,12,511
chr10	72403983	.	ACACG	A	7946.62	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.037;DP=706;FS=2.032;HRun=0;HaplotypeScore=122.4009;InbreedingCoeff=0.9668;MQ=63.73;MQ0=0;MQRankSum=-1.725;QD=28.18;ReadPosRankSum=7.398;VQSLOD=4.6550;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:14,34:48:84.29:1417,84,0	0/0:9,0:9:21.07:0,21,519	0/0:28,0:25:54.12:0,54,1119	0/0:29,0:27:44.76:0,45,805	0/0:18,0:18:45.14:0,45,1023	0/0:28,0:28:63.17:0,63,1508	0/0:31,0:31:54.12:0,54,1153	0/0:19,0:19:36.12:0,36,841	0/0:28,0:28:66.23:0,66,1608	1/1:9,11:20:36.12:581,36,0	1/1:5,3:8:3.01:51,3,0	1/1:7,16:23:45.15:759,45,0	1/1:6,23:29:57.13:929,57,0	0/0:36,0:36:69.09:0,69,1472	0/0:20,0:20:54.13:0,54,1259	0/0:21,0:21:45.11:0,45,1065	1/1:11,26:37:66.23:1108,66,0	1/1:26,1:27:30.06:316,30,0	0/0:37,0:37:81.70:0,82,1801	0/0:10,0:10:15.05:0,15,373	0/0:62,0:62:99:0,156,3445	1/1:2,13:15:30.10:506,30,0	1/1:3,11:14:20.94:355,21,0	1/1:11,26:37:66.23:1114,66,0	1/1:4,20:24:48.16:810,48,0	0/0:23,0:23:51.17:0,51,1183	0/0:21,0:21:42.13:0,42,959	0/0:4,0:4:12.04:0,12,297
chr10	72406834	.	G	GATTT	842.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.892;DP=522;FS=4.110;HRun=0;HaplotypeScore=92.0058;InbreedingCoeff=0.9129;MQ=63.18;MQ0=5;MQRankSum=-1.910;QD=49.54;ReadPosRankSum=1.717;VQSLOD=4.1038;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.12:0,81,1449	0/0:10,0:10:30.10:0,30,552	0/0:15,0:13:6.97:0,7,306	0/0:14,0:11:27.09:0,27,492	0/0:23,0:23:63.22:0,63,1159	0/0:18,0:18:51.17:0,51,939	0/0:24,0:24:66.23:0,66,1214	0/0:28,0:28:60.20:0,60,1068	0/0:10,0:10:21.07:0,21,381	0/0:22,0:22:57.20:0,57,1049	0/0:15,0:15:36.12:0,36,662	0/0:17,0:17:51.17:0,51,939	0/0:15,0:15:42.13:0,42,742	0/0:18,0:18:51.17:0,51,939	0/0:22,0:22:63.22:0,63,1159	0/0:16,0:16:45.15:0,45,828	0/0:25,0:24:66.23:0,66,1215	1/1:3,14:16:36.12:937,36,0	0/0:17,0:17:41.41:0,41,737	0/0:18,0:18:54.19:0,54,994	0/0:16,0:16:48.16:0,48,883	0/0:21,0:21:60.21:0,60,1104	0/0:16,0:16:45.09:0,45,828	0/0:29,0:29:75.24:0,75,1349	0/0:12,0:11:27.09:0,27,496	0/0:15,0:15:45.14:0,45,793	0/0:27,0:27:78.27:0,78,1435	0/0:12,0:10:27.09:0,27,497
chr10	72407085	.	TA	T	4799.94	PASS	AB=0.833;AC=23;AF=0.411;AN=56;BaseQRankSum=15.729;DP=553;FS=0.705;HRun=10;HaplotypeScore=71.8908;InbreedingCoeff=0.9109;MQ=66.79;MQ0=0;MQRankSum=0.922;QD=20.60;ReadPosRankSum=2.625;VQSLOD=5.8186;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,34:41:78.44:812,78,0	0/0:7,0:7:18.05:0,18,199	0/1:4,1:5:20.04:20,0,27	0/0:7,0:7:12.01:0,12,122	0/0:21,2:23:8.06:0,8,544	0/0:29,0:29:75.20:0,75,830	0/0:20,0:20:49.38:0,49,534	0/0:40,0:40:99:0,105,1142	0/0:19,0:19:51.14:0,51,564	1/1:4,13:17:38.98:339,39,0	1/1:4,13:17:35.98:312,36,0	1/1:0,16:16:38.99:338,39,0	1/1:0,9:9:24:208,24,0	0/0:16,0:16:36.10:0,36,396	0/0:17,0:17:45.08:0,45,480	0/0:15,0:15:36.08:0,36,389	1/1:4,28:32:74.98:651,75,0	1/1:2,20:22:56.93:488,57,0	0/0:24,0:24:57.15:0,57,630	0/0:21,0:21:48.10:0,48,519	0/0:10,0:10:24.06:0,24,263	1/1:2,9:11:26.89:225,27,0	1/1:4,19:23:50.98:443,51,0	1/1:1,22:23:62.99:547,63,0	1/1:1,16:17:47.99:416,48,0	0/0:29,0:29:84.21:0,84,913	0/0:32,0:32:87.16:0,87,923	0/0:11,0:11:27.02:0,27,284
chr10	72408992	.	AAAAACAAAC	A	4749.95	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.987;DP=602;FS=3.836;HRun=0;HaplotypeScore=164.6684;InbreedingCoeff=0.9950;MQ=65.23;MQ0=0;MQRankSum=-10.739;QD=59.37;ReadPosRankSum=-0.093;VQSLOD=4.8259;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.25:0,72,3096	0/0:7,0:7:21.07:0,21,1014	0/0:22,0:20:54.18:0,54,1492	0/0:16,0:14:35.67:0,36,710	0/0:24,0:24:66.23:0,66,2854	0/0:28,0:28:78.27:0,78,3495	0/0:24,0:24:69.24:0,69,2755	0/0:38,0:38:99:0,111,4457	0/0:27,0:27:78.27:0,78,3400	1/1:0,18:18:54.14:1476,54,0	1/1:1,18:19:45.15:1161,45,0	0/0:18,0:18:54.18:0,54,2180	0/0:19,0:19:57.20:0,57,2569	0/0:14,0:14:42.14:0,42,1722	0/0:33,0:33:96.31:0,96,4029	0/0:23,0:23:69.22:0,69,2783	1/1:4,18:22:33.11:977,33,0	1/1:7,0:7:15.05:190,15,0	0/0:25,0:25:75.26:0,75,3312	0/0:23,0:23:69.24:0,69,3314	0/0:22,0:22:66.23:0,66,2959	0/0:14,0:14:30.10:0,30,1439	0/0:28,0:28:78.27:0,78,3512	0/0:19,0:19:54.18:0,54,2359	1/1:0,14:14:33.11:946,33,0	0/0:26,0:25:75.26:0,75,3206	0/0:32,0:32:96.32:0,96,4065	0/0:12,0:12:36.12:0,36,1634
chr10	72408993	.	AAAACAAAC	A	3008.69	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.298;DP=602;FS=2.368;HRun=0;HaplotypeScore=157.7037;InbreedingCoeff=0.9874;MQ=64.85;MQ0=0;MQRankSum=-10.926;QD=38.08;ReadPosRankSum=-1.089;VQSLOD=3.1645;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.70:0,70,2663	0/0:7,0:7:21.07:0,21,874	0/0:21,0:19:18.11:0,18,921	0/0:18,0:13:12.98:0,13,342	0/0:24,0:24:60.21:0,60,2383	0/0:28,0:28:72.23:0,72,2910	0/0:23,0:23:60.19:0,60,2089	0/0:38,0:38:99:0,99,3487	0/0:28,0:28:75.26:0,75,2923	1/1:18,0:18:51.12:899,51,0	1/1:19,0:19:41.97:699,42,0	0/0:19,0:19:48.16:0,48,1777	0/0:20,0:20:57.20:0,57,2221	0/0:14,0:14:33.11:0,33,1393	0/0:34,0:34:87.28:0,87,3340	0/0:23,0:23:54.19:0,54,2214	1/1:21,0:21:33.11:603,33,0	1/1:2,5:7:15.05:394,15,0	0/0:25,0:25:69.24:0,69,2703	0/0:23,0:23:69.24:0,69,2813	0/0:22,0:22:66.17:0,66,2441	0/0:13,0:13:30.10:0,30,1266	0/0:28,0:28:75.24:0,75,2907	0/0:19,0:19:48.16:0,48,1945	1/1:14,0:14:33.04:587,33,0	0/0:26,0:25:66.23:0,66,2600	0/0:32,0:32:84.29:0,84,3314	0/0:12,0:12:36.12:0,36,1359
chr10	72409021	.	T	TA	196.26	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.863;DP=587;FS=3.019;HRun=7;HaplotypeScore=83.2661;InbreedingCoeff=0.9915;MQ=66.25;MQ0=1;MQRankSum=-3.686;QD=24.53;ReadPosRankSum=0.632;VQSLOD=4.1258;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.13:0,84,811	0/0:7,0:7:21.03:0,21,203	0/0:22,0:22:57.49:0,57,531	0/0:12,0:11:30.01:0,30,276	0/0:26,0:26:66.04:0,66,626	0/0:23,0:23:60.09:0,60,579	0/0:19,0:19:51.08:0,51,492	0/0:37,0:37:93.15:0,93,898	0/0:26,0:26:72.11:0,72,695	0/0:25,0:24:60.03:0,60,565	0/0:19,0:19:42.05:0,42,405	0/0:17,0:17:48.08:0,48,463	0/0:20,0:20:57.08:0,57,544	0/0:11,0:11:33.05:0,33,318	0/0:32,0:32:81.08:0,81,769	0/0:20,0:20:54.08:0,54,522	0/0:21,0:21:45.07:0,45,431	1/1:0,8:8:24.07:290,24,0	0/0:23,0:23:63.09:0,63,604	0/0:26,0:26:63.09:0,63,602	0/0:19,0:19:51.08:0,51,492	0/0:13,0:13:39.05:0,39,372	0/0:21,0:21:57.08:0,57,545	0/0:23,0:23:57.08:0,57,550	0/0:15,0:15:27.03:0,27,260	0/0:27,0:26:75.12:0,75,724	0/0:33,0:33:93.14:0,93,898	0/0:10,0:10:30.05:0,30,289
chr10	72409246	.	TA	T	154.52	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=4.986;DP=469;FS=1.320;HRun=3;HaplotypeScore=50.0918;InbreedingCoeff=0.9309;MQ=69.79;MQ0=4;MQRankSum=-3.712;QD=14.05;ReadPosRankSum=0.759;VQSLOD=2.6086;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.27:0,81,1164	0/0:12,0:12:33.11:0,33,475	0/0:16,1:14:13.30:0,13,208	./.	0/0:20,0:20:57.18:0,57,802	0/0:15,0:15:45.14:0,45,628	0/0:18,0:18:51.16:0,51,714	0/0:25,0:25:72.16:0,72,918	0/0:19,0:19:57.16:0,57,781	0/0:21,0:21:63.13:0,63,845	0/0:25,0:25:57.05:0,57,991	0/0:16,0:16:45.14:0,45,630	0/0:15,0:15:45.15:0,45,645	0/0:6,0:6:18.05:0,18,240	0/0:15,0:15:45.11:0,45,588	0/0:8,0:8:24.07:0,24,326	0/0:25,0:24:66.15:0,66,903	1/1:3,8:10:21.05:246,21,0	0/0:16,0:15:45.14:0,45,631	0/0:19,0:18:54.17:0,54,747	0/0:10,0:10:27.09:0,27,388	0/0:4,0:4:12.04:0,12,173	0/0:19,0:19:57.16:0,57,779	0/0:8,0:8:24.06:0,24,326	0/0:19,0:19:54.15:0,54,718	0/0:25,0:25:72.22:0,72,1002	0/0:33,0:32:99:0,99,1415	0/0:8,0:8:24.08:0,24,337
chr10	72409708	.	TG	T	153.84	PASS	AB=0.889;AC=3;AF=0.054;AN=56;BaseQRankSum=5.362;DP=610;FS=5.029;HRun=1;HaplotypeScore=97.8015;InbreedingCoeff=0.6385;MQ=59.60;MQ0=0;MQRankSum=-3.787;QD=3.85;ReadPosRankSum=-1.701;VQSLOD=-0.3252;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,4:32:50.52:51,0,143	0/0:7,0:7:21.07:0,21,304	0/0:26,0:19:48.09:0,48,658	0/0:20,0:15:16.91:0,17,480	0/0:25,0:25:72.16:0,72,988	0/0:15,0:15:45.13:0,45,638	0/0:20,0:20:60.17:0,60,837	0/0:31,0:31:75.19:0,75,1250	0/0:20,0:20:60.16:0,60,835	0/0:33,0:33:97.64:0,98,1278	0/0:18,0:18:34.78:0,35,696	0/0:21,0:21:43.60:0,44,273	0/0:15,0:15:28.86:0,29,179	0/0:18,0:18:51.15:0,51,724	0/0:21,0:21:63.20:0,63,902	0/0:29,0:29:87.25:0,87,1212	0/0:37,0:37:95.72:0,96,1297	1/1:3,5:8:23.97:209,24,0	0/0:19,0:18:57.13:0,57,748	0/0:23,0:22:66.13:0,66,877	0/0:19,0:19:57.18:0,57,814	0/0:15,0:15:28.46:0,28,198	0/0:19,0:19:48.52:0,49,250	0/0:15,0:15:37.88:0,38,241	0/0:25,0:25:65.65:0,66,852	0/0:24,0:24:69.22:0,69,978	0/0:23,0:23:69.21:0,69,988	0/0:32,0:32:96.22:0,96,1314
chr10	72409709	.	G	GT	2246.46	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=8.127;DP=616;FS=5.609;HRun=4;HaplotypeScore=93.0275;InbreedingCoeff=0.9040;MQ=59.71;MQ0=0;MQRankSum=-1.420;QD=17.55;ReadPosRankSum=1.170;VQSLOD=3.0160;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,1:33:21.13:178,21,0	0/0:8,0:8:21.05:0,21,230	0/0:27,0:20:45.11:0,45,498	0/0:20,0:15:34.34:0,34,375	0/0:26,0:26:69.18:0,69,771	0/0:15,0:15:42.10:0,42,466	0/0:19,0:19:57.16:0,57,646	0/0:31,0:31:85.63:0,86,936	0/0:20,0:20:54.15:0,54,612	0/0:34,0:34:46.99:0,47,296	0/0:18,0:18:12.60:0,13,146	1/1:3,18:21:17.08:433,17,0	1/1:1,14:15:27.09:342,27,0	0/0:18,0:18:51.14:0,51,578	0/0:21,0:21:63.16:0,63,705	0/0:29,0:29:81.23:0,81,918	0/0:36,0:36:70.52:0,71,328	0/1:9,0:9:5.86:6,0,40	0/0:21,0:20:54.13:0,54,596	0/0:23,0:22:60.16:0,60,670	0/0:20,0:20:54.15:0,54,613	1/1:1,13:14:36.11:454,36,0	1/1:0,19:19:48.15:606,48,0	1/1:2,15:17:31.59:415,32,0	0/0:22,1:23:11.31:0,11,162	0/0:24,0:24:65.84:0,66,706	0/0:23,0:23:69.18:0,69,771	0/0:32,0:32:90.26:0,90,1019
chr10	72409713	.	TG	T	1481.36	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=9.502;DP=626;FS=2.322;HRun=1;HaplotypeScore=97.5369;InbreedingCoeff=0.8765;MQ=62.20;MQ0=0;MQRankSum=-2.159;QD=9.14;ReadPosRankSum=-0.190;VQSLOD=1.0376;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,4:32:33.23:275,33,0	0/0:8,0:8:24.01:0,24,306	0/0:30,0:23:59.82:0,60,749	0/0:22,0:17:32.87:0,33,506	0/0:26,0:26:75.14:0,75,1009	0/0:15,0:15:45.12:0,45,618	0/0:21,0:21:63.16:0,63,861	0/0:31,0:31:72.43:0,72,1165	0/0:20,0:20:60.17:0,60,836	0/1:32,0:32:33.83:34,0,107	0/0:18,0:18:22.23:0,22,120	1/1:20,0:20:34.77:247,35,0	1/1:17,0:17:33.48:218,33,0	0/0:20,0:20:60.17:0,60,823	0/0:22,0:22:66.18:0,66,907	0/0:29,0:29:87.25:0,87,1232	0/0:35,0:35:68.54:0,69,235	1/1:8,2:10:19.26:146,19,0	0/0:21,0:20:62.96:0,63,795	0/0:22,0:21:63.20:0,63,900	0/0:21,0:21:62.97:0,63,849	1/1:14,0:14:41.24:263,41,0	1/1:19,0:19:46.62:270,47,0	1/1:18,0:18:33.94:228,34,0	0/0:23,0:23:2.65:0,3,74	0/0:26,0:26:74.19:0,74,930	0/0:24,0:24:72.23:0,72,1030	0/0:30,0:30:90.30:0,90,1301
chr10	72409716	.	TTTG	T	247.48	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.886;DP=631;FS=22.978;HRun=0;HaplotypeScore=127.7252;InbreedingCoeff=0.9956;MQ=62.96;MQ0=0;MQRankSum=-3.228;QD=22.50;ReadPosRankSum=-2.629;VQSLOD=1.1315;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:54.37:0,54,602	0/0:8,0:8:24.08:0,24,469	0/0:29,0:22:57.13:0,57,880	0/0:23,0:18:50.16:0,50,728	0/0:25,0:25:75.25:0,75,1395	0/0:15,0:15:45.13:0,45,863	0/0:21,0:21:60.20:0,60,1156	0/0:30,0:30:62.25:0,62,1431	0/0:20,0:20:60.19:0,60,1151	0/0:31,0:31:59.42:0,59,937	0/0:18,0:18:25.47:0,25,614	0/0:19,0:19:38.86:0,39,434	0/0:17,0:17:32.87:0,33,386	0/0:20,0:20:60.18:0,60,1090	0/0:22,0:22:60.20:0,60,1224	0/0:30,0:30:90.26:0,90,1677	0/0:36,0:36:75.93:0,76,1028	1/1:7,4:11:29.99:342,30,0	0/0:20,0:20:51.16:0,51,910	0/0:22,0:21:63.18:0,63,1166	0/0:22,0:22:63.21:0,63,1229	0/0:16,0:16:45.12:0,45,540	0/0:19,0:19:46.70:0,47,574	0/0:19,0:19:43.18:0,43,497	0/0:24,0:24:53.99:0,54,637	0/0:23,0:23:69.22:0,69,1244	0/0:26,0:26:78.23:0,78,1428	0/0:30,0:30:64.26:0,64,1703
chr10	72409719	.	G	GT	2826.04	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.001;DP=617;FS=2.448;HRun=7;HaplotypeScore=93.2093;InbreedingCoeff=0.9804;MQ=63.31;MQ0=0;MQRankSum=-1.491;QD=23.55;ReadPosRankSum=-0.169;VQSLOD=3.4615;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:23.91:0,24,289	0/0:8,0:8:24.04:0,24,232	0/0:26,0:22:47.97:0,48,453	0/0:22,0:18:42.78:0,43,381	0/0:25,0:25:75.12:0,75,723	0/0:16,0:16:42.06:0,42,406	0/0:20,0:20:60.08:0,60,573	0/0:29,0:29:63.03:0,63,591	0/0:20,0:20:51.07:0,51,492	1/1:2,28:30:84.26:1010,84,0	1/1:2,16:18:45.09:517,45,0	0/0:18,0:18:9.01:0,9,108	0/0:15,0:15:25.09:0,25,128	0/0:19,0:19:54.09:0,54,521	0/0:21,0:21:60.08:0,60,573	0/0:31,0:31:81.12:0,81,782	1/1:7,29:37:52.74:830,53,0	1/1:10,0:11:13.98:58,14,0	0/0:19,0:19:51.08:0,51,493	0/0:21,0:20:54.08:0,54,521	0/0:21,0:21:63.10:0,63,608	0/0:17,0:17:38.31:0,38,219	0/0:20,0:20:41.12:0,41,185	0/0:18,0:18:35.62:0,36,200	1/1:1,23:24:49.96:585,50,0	0/0:24,1:25:32.87:0,33,596	0/0:26,0:26:69.11:0,69,666	0/0:28,0:29:86.16:0,86,813
chr10	72410591	.	G	GA	599.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.588;DP=702;FS=0.000;HRun=1;HaplotypeScore=65.7471;InbreedingCoeff=0.9992;MQ=72.74;MQ0=0;MQRankSum=-1.550;QD=29.98;ReadPosRankSum=0.540;VQSLOD=3.2119;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,1721	0/0:10,0:10:30.08:0,30,373	0/0:12,0:12:33.08:0,33,398	0/0:20,0:19:48.15:0,48,610	0/0:26,0:26:75.06:0,75,944	0/0:30,0:30:90.29:0,90,1168	0/0:21,0:21:63.16:0,63,774	0/0:27,0:27:81.23:0,81,1003	0/0:23,0:23:60.19:0,60,779	0/0:29,0:29:84.26:0,84,1077	0/0:21,0:21:60.20:0,60,778	0/0:18,0:18:54.18:0,54,698	0/0:22,0:22:66.20:0,66,843	0/0:26,0:26:78.22:0,78,982	0/0:25,0:25:69.22:0,69,884	0/0:31,0:30:90.28:0,90,1153	0/0:21,0:21:57.19:0,57,740	1/1:1,19:20:48.13:695,48,0	0/0:20,0:20:57.17:0,57,725	0/0:25,0:25:72.23:0,72,934	0/0:26,0:26:78.16:0,78,960	0/0:23,0:23:69.21:0,69,880	0/0:26,0:26:78.25:0,78,1000	0/0:34,0:34:99:0,102,1324	0/0:25,0:25:75.24:0,75,973	0/0:38,0:38:99:0,111,1426	0/0:40,0:39:99:0,117,1518	0/0:16,0:16:42.08:0,42,511
chr10	72411725	.	G	GTTC	245.08	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.356;DP=610;FS=4.229;HRun=0;HaplotypeScore=85.6449;InbreedingCoeff=0.9773;MQ=63.41;MQ0=0;MQRankSum=-2.039;QD=35.01;ReadPosRankSum=-0.989;VQSLOD=3.5452;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.30:0,96,1520	0/0:11,0:11:30.09:0,30,466	0/0:20,0:18:48.13:0,48,766	0/0:17,0:13:25.38:0,25,420	0/0:24,0:24:66.22:0,66,1077	0/0:24,0:24:66.21:0,66,1054	0/0:10,0:10:30.10:0,30,487	0/0:34,0:34:90.31:0,90,1468	0/0:14,0:14:42.14:0,42,684	0/0:22,0:22:63.21:0,63,1009	0/0:27,0:27:81.28:0,81,1322	0/0:19,0:19:54.18:0,54,882	0/0:29,0:29:84.29:0,84,1368	0/0:19,0:19:57.19:0,57,931	0/0:18,0:18:51.16:0,51,809	0/0:22,0:22:63.22:0,63,1029	0/0:16,0:16:45.13:0,45,707	1/1:2,4:7:15.05:333,15,0	0/0:17,0:17:36.11:0,36,566	0/0:32,0:32:96.33:0,96,1567	0/0:37,0:37:99:0,102,1630	0/0:24,0:24:69.24:0,69,1126	0/0:32,0:32:90.29:0,90,1445	0/0:19,0:19:51.17:0,51,833	0/0:29,0:29:87.30:0,87,1413	0/0:26,0:26:78.25:0,78,1230	0/0:20,0:20:51.17:0,51,833	0/0:7,0:7:21.04:0,21,316
chr10	72412138	.	CTT	C	1329.16	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.616;DP=700;FS=3.207;HRun=3;HaplotypeScore=82.0276;InbreedingCoeff=0.9995;MQ=86.59;MQ0=0;MQRankSum=-2.428;QD=34.98;ReadPosRankSum=1.900;VQSLOD=3.4791;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:38:93.32:1424,93,0	0/0:18,0:18:54.16:0,54,1007	0/0:27,0:27:36.92:0,37,1230	0/0:23,0:23:63.53:0,64,1107	0/0:43,0:43:99:0,126,2396	0/0:33,0:33:99:0,99,1897	0/0:11,0:11:33.09:0,33,597	0/0:37,0:37:99:0,111,2134	0/0:19,0:19:57.20:0,57,1092	0/0:26,0:26:78.26:0,78,1478	0/0:42,0:42:99:0,126,2391	0/0:13,0:13:39.13:0,39,748	0/0:27,0:27:81.28:0,81,1545	0/0:19,0:19:54.18:0,54,1005	0/0:21,0:21:60.16:0,60,1122	0/0:15,0:15:45.15:0,45,864	0/0:17,0:17:51.17:0,51,978	0/0:24,0:24:69.24:0,69,1332	0/0:22,0:22:66.22:0,66,1229	0/0:32,0:32:96.27:0,96,1784	0/0:25,0:25:75.24:0,75,1408	0/0:26,0:26:75.25:0,75,1398	0/0:20,0:20:60.21:0,60,1153	0/0:21,0:21:63.22:0,63,1192	0/0:19,0:19:57.18:0,57,1069	0/0:35,0:35:99:0,102,1963	0/0:23,0:23:63.22:0,63,1216	0/0:24,0:24:72.25:0,72,1379
chr10	72414231	.	T	TA	3925.63	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-1.495;DP=478;FS=14.493;HRun=8;HaplotypeScore=50.4351;InbreedingCoeff=0.9351;MQ=67.95;MQ0=0;MQRankSum=-0.077;QD=20.77;ReadPosRankSum=2.000;VQSLOD=2.3558;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,16:21:48.14:553,48,0	0/0:6,0:6:15.01:0,15,137	0/0:5,0:5:14.47:0,14,112	0/1:5,0:5:5.95:6,0,21	0/0:22,0:22:66.02:0,66,598	0/0:20,0:20:47.04:0,47,413	0/0:17,0:17:42.02:0,42,384	0/0:26,0:26:68.96:0,69,619	0/0:28,0:28:71.95:0,72,638	1/1:2,0:18:48.59:260,49,0	1/1:2,2:17:31.25:159,31,0	1/1:1,12:13:27.08:312,27,0	1/1:6,17:23:45.13:519,45,0	0/0:9,0:9:24.01:0,24,219	0/0:12,0:12:33.01:0,33,299	0/0:12,0:12:36:0,36,321	1/1:1,1:12:25.57:130,26,0	1/1:2,21:23:54.16:623,54,0	0/0:17,0:17:45.02:0,45,410	0/0:27,0:27:75.04:0,75,686	0/0:20,0:20:54.02:0,54,493	1/1:1,14:15:30.09:343,30,0	1/1:3,20:23:54.16:623,54,0	1/1:2,8:10:24.07:277,24,0	1/1:2,0:9:22.85:121,23,0	0/0:18,0:19:33.43:0,33,397	0/0:27,0:27:69:0,69,621	0/0:22,0:22:60.03:0,60,549
chr10	72414354	.	TAA	T	764.42	PASS	AB=0.833;AC=12;AF=0.214;AN=56;BaseQRankSum=3.430;DP=533;FS=9.512;HRun=16;HaplotypeScore=75.4194;InbreedingCoeff=0.7267;MQ=74.64;MQ0=2;MQRankSum=-0.082;QD=6.07;ReadPosRankSum=2.445;VQSLOD=-0.5813;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,10:20:20.22:231,20,0	0/0:10,0:10:26.30:0,26,321	0/1:44,0:22:7.01:7,0,184	0/0:47,0:20:7.40:0,7,102	0/0:12,0:17:34.84:0,35,378	0/0:14,0:18:34.93:0,35,389	0/0:12,0:12:29.61:0,30,304	0/0:31,0:33:70.22:0,70,736	0/0:14,0:14:36.03:0,36,419	0/0:23,0:23:42.05:0,42,470	0/0:24,0:25:56.63:0,57,619	1/1:5,8:15:7.97:144,8,0	0/1:5,5:10:11.93:41,0,12	0/0:9,0:9:15.03:0,15,176	0/0:4,0:5:15.04:0,15,185	0/0:11,0:13:23.55:0,24,267	0/0:14,0:19:12.78:0,13,219	0/0:18,0:19:42.13:0,42,536	0/0:11,0:13:29.05:0,29,304	0/0:21,0:21:49.37:0,49,579	0/0:10,0:12:26.98:0,27,274	1/1:3,8:12:26.93:222,27,0	1/1:4,10:18:11.26:197,11,0	1/1:6,1:7:4.58:89,5,0	0/0:18,0:18:45.04:0,45,503	0/0:20,0:24:53.28:0,53,546	0/0:32,0:36:80.15:0,80,879	0/0:9,0:18:32.56:0,33,343
chr10	72414621	.	T	TAA	493.43	PASS	AC=16;AF=0.320;AN=50;BaseQRankSum=2.743;DP=265;FS=19.641;HRun=1;HaplotypeScore=43.7868;InbreedingCoeff=0.8010;MQ=91.00;MQ0=0;MQRankSum=-0.665;QD=32.90;ReadPosRankSum=-4.784;VQSLOD=1.2552;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:4:12.04:0,12,196	0/0:26,0:21:60.20:0,60,929	0/0:27,0:16:45.13:0,45,682	0/0:8,0:8:24.06:0,24,365	0/0:13,0:13:39.13:0,39,631	0/0:8,0:8:24.08:0,24,371	0/0:27,0:27:75.23:0,75,1157	0/0:8,0:8:24.08:0,24,376	1/1:1,0:1:3.01:41,3,0	1/1:2,0:2:5.99:50,6,0	./.	1/1:1,1:2:6.02:120,6,0	0/0:14,0:14:33.11:0,33,527	0/0:12,0:12:36.11:0,36,562	0/0:14,0:14:39.09:0,39,557	1/1:1,0:1:3.01:60,3,0	1/1:1,1:2:6.02:101,6,0	0/0:17,0:17:51.12:0,51,779	0/0:16,0:16:48.14:0,48,734	0/0:8,0:8:21.07:0,21,342	./.	1/1:0,2:4:8.99:117,9,0	1/1:1,1:2:6.02:108,6,0	1/1:0,1:1:3.01:59,3,0	0/0:19,0:19:57.18:0,57,907	0/0:23,0:23:66.21:0,66,1026	0/0:5,0:5:15.05:0,15,244
chr10	72414671	.	A	ATT	2853.61	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=12.166;DP=456;FS=4.955;HRun=0;HaplotypeScore=111.4455;InbreedingCoeff=0.9788;MQ=64.38;MQ0=13;MQRankSum=-10.380;QD=32.43;ReadPosRankSum=-1.179;VQSLOD=5.6108;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:24.07:323,24,0	0/0:9,0:9:27.06:0,27,405	0/0:34,0:12:17.42:0,17,350	0/0:45,0:15:21:0,21,393	0/0:26,0:26:66.18:0,66,1002	0/0:13,0:13:39.12:0,39,602	0/0:13,0:13:39.12:0,39,578	0/0:32,0:32:90.30:0,90,1414	0/0:10,0:10:30.10:0,30,480	1/1:8,0:8:24.06:317,24,0	1/1:9,0:9:24.03:290,24,0	1/1:12,0:12:33.09:421,33,0	1/1:9,1:10:27.07:331,27,0	0/0:17,0:17:42.14:0,42,678	0/0:19,0:19:54.17:0,54,849	0/0:19,0:19:57.19:0,57,915	1/1:5,0:5:15.05:197,15,0	1/1:9,0:9:22.84:298,23,0	0/0:32,0:32:96.19:0,96,1517	0/0:26,0:26:75.25:0,75,1188	0/0:9,0:9:27.09:0,27,435	1/1:10,3:13:36.07:442,36,0	1/1:6,0:6:15:198,15,0	1/1:4,0:4:9.01:108,9,0	1/1:4,0:4:12.04:152,12,0	0/0:24,0:24:34.27:0,34,1029	0/0:25,0:25:69.23:0,69,1092	0/0:15,0:15:42.13:0,42,658
chr10	72415029	.	C	CG	244.73	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.292;DP=498;FS=0.000;HRun=2;HaplotypeScore=78.2540;InbreedingCoeff=0.8906;MQ=55.82;MQ0=10;MQRankSum=-2.585;QD=12.24;ReadPosRankSum=-1.952;VQSLOD=1.4996;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,9:17:14.17:332,14,0	0/0:7,0:7:21:0,21,240	0/0:32,0:10:14.20:0,14,128	0/0:39,0:11:9.26:0,9,109	0/0:20,0:20:45.05:0,45,500	0/0:20,0:20:57.16:0,57,689	0/0:17,0:17:33.10:0,33,408	0/0:21,0:21:57.09:0,57,669	0/0:16,0:16:33.09:0,33,389	0/0:17,0:17:51.08:0,51,568	0/0:21,0:20:30.01:0,30,334	0/0:12,0:12:30.09:0,30,360	0/0:16,0:16:18.03:0,18,200	0/0:16,0:16:45.12:0,45,527	0/0:15,0:14:42.06:0,42,478	0/0:13,0:13:36.08:0,36,410	0/0:21,0:20:36.03:0,36,398	0/0:22,0:22:54.09:0,54,622	0/0:18,0:17:51.12:0,51,595	0/0:21,0:21:54.08:0,54,623	0/0:14,0:14:36.02:0,36,396	0/0:15,0:14:36.11:0,36,439	0/0:13,0:12:26.99:0,27,286	0/0:14,0:13:29.99:0,30,325	0/0:10,0:10:17.95:0,18,185	0/0:14,0:14:42.12:0,42,510	0/0:18,0:18:54.15:0,54,645	0/0:14,0:13:33.10:0,33,407
chr10	72415046	.	AG	A	1945.88	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=9.634;DP=579;FS=6.201;HRun=3;HaplotypeScore=82.9301;InbreedingCoeff=0.9522;MQ=61.86;MQ0=11;MQRankSum=-4.857;QD=10.58;ReadPosRankSum=1.297;VQSLOD=1.2494;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,1:21:36.41:194,36,0	0/0:6,0:6:17:0,17,148	0/0:64,0:19:32.90:0,33,268	0/0:60,0:19:14.85:0,15,143	0/0:19,0:19:42.65:0,43,369	0/0:26,0:26:70.89:0,71,814	0/0:22,0:23:34.23:0,34,592	0/0:26,0:26:65.77:0,66,697	0/0:16,0:16:19.80:0,20,195	1/1:7,14:20:48.75:464,49,0	1/1:3,19:23:35.80:369,36,0	1/1:8,0:8:14.80:103,15,0	1/1:12,0:12:5.22:34,5,0	0/0:17,0:17:50.74:0,51,582	0/0:20,0:20:49.80:0,50,577	0/0:13,0:13:35.06:0,35,382	1/1:5,18:22:20.04:296,20,0	1/1:20,3:23:32.24:262,32,0	0/0:20,0:19:46.71:0,47,436	0/0:19,0:20:26.97:0,27,383	0/0:12,0:12:22.68:0,23,203	1/1:16,1:16:31.21:210,31,0	1/1:11,0:10:6.40:39,6,0	1/1:11,1:12:12.56:61,13,0	1/1:3,8:11:12.91:132,13,0	0/0:14,0:14:42.09:0,42,478	0/0:23,0:22:57.07:0,57,640	0/0:13,0:13:37.13:0,37,344
chr10	72415048	.	G	GAAAA	662.33	PASS	AB=0.943;AC=13;AF=0.232;AN=56;BaseQRankSum=6.020;DP=582;FS=6.127;HRun=0;HaplotypeScore=119.1653;InbreedingCoeff=0.5670;MQ=63.87;MQ0=11;MQRankSum=-4.372;QD=4.42;ReadPosRankSum=-1.574;VQSLOD=1.4878;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,1:18:0.59:279,0,1	0/0:6,0:6:18.03:0,18,304	0/0:66,0:20:43.76:0,44,440	0/0:59,0:19:32.47:0,32,378	0/0:20,0:20:45.13:0,45,711	0/0:26,0:26:72.23:0,72,1342	0/0:23,0:23:46.72:0,47,975	0/0:24,0:24:69.20:0,69,1160	0/0:16,0:16:27.06:0,27,459	0/1:18,0:20:46.29:46,0,149	0/1:21,0:23:2.92:3,0,199	0/1:8,0:8:0.35:49,0,0	1/1:1,7:15:2.76:64,3,0	0/0:17,0:17:51.12:0,51,886	0/0:21,0:21:57.18:0,57,1044	0/0:13,0:13:36.10:0,36,603	0/0:23,0:22:35.72:0,36,306	0/1:19,0:26:24.52:25,0,154	0/0:20,0:19:54.15:0,54,907	0/0:21,0:21:58.91:0,59,768	0/0:12,0:12:27.52:0,28,429	1/1:13,0:15:19.52:152,20,0	1/1:4,0:10:9.41:103,9,0	1/1:5,3:11:9.22:103,9,0	0/0:12,0:13:13.24:0,13,108	0/0:14,0:14:42.12:0,42,706	0/0:25,0:24:66.07:0,66,1235	0/0:13,0:13:39.11:0,39,652
chr10	72415049	.	GA	G	209.25	PASS	AB=0.892;AC=13;AF=0.232;AN=56;BaseQRankSum=4.419;DP=597;FS=1.081;HRun=15;HaplotypeScore=97.1994;InbreedingCoeff=-0.1704;MQ=63.88;MQ0=11;MQRankSum=-0.062;QD=1.02;ReadPosRankSum=3.170;VQSLOD=-0.5129;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:22:12.06:0,12,126	0/1:3,1:5:4.42:4,0,79	0/0:65,0:20:19.51:0,20,117	0/0:60,0:20:10.50:0,11,86	0/1:18,2:21:15.14:15,0,110	0/0:22,3:26:16.99:0,17,383	0/0:20,0:24:12.30:0,12,309	0/0:21,1:24:16.43:0,16,230	0/1:14,1:15:26.47:26,0,41	0/1:23,0:22:44.70:45,0,58	1/1:23,0:23:1.48:68,1,0	0/0:9,0:9:12.01:0,12,64	0/0:12,0:12:1.15:0,1,11	0/0:17,0:17:38.95:0,39,334	0/0:18,2:22:11.34:0,11,340	0/1:9,2:12:1.27:1,0,129	0/1:24,0:23:43.45:79,0,43	0/0:28,0:28:14.61:0,15,226	0/1:15,4:18:41.14:41,0,156	0/0:22,0:22:3.66:0,4,203	0/1:8,1:12:2.14:2,0,126	0/0:14,0:13:0.37:0,0,49	0/0:15,0:14:28.82:0,29,163	0/0:13,0:12:11.45:0,11,60	0/1:14,0:14:44.37:44,0,50	0/0:14,0:15:20.80:0,21,166	0/1:21,2:24:2.12:2,0,345	0/1:10,1:12:13.39:13,0,83
chr10	72415994	.	G	GACACAGACACAGACACAC	5691.18	PASS	AB=0.779;AC=20;AF=0.357;AN=56;BaseQRankSum=5.686;DP=744;FS=18.662;HRun=0;HaplotypeScore=290.1409;InbreedingCoeff=0.8001;MQ=53.81;MQ0=14;MQRankSum=-5.337;QD=18.07;ReadPosRankSum=-5.479;VQSLOD=1.2808;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:40:30.02:423,30,0	0/0:11,0:11:19.22:0,19,763	0/0:31,0:6:13.78:0,14,157	0/0:19,0:6:7.58:0,8,112	0/0:23,0:25:47.17:0,47,1523	0/0:22,0:22:54.17:0,54,1708	0/0:34,0:40:96.17:0,96,2677	0/0:23,0:22:20.15:0,20,608	0/0:26,0:28:59.76:0,60,2328	1/1:27,0:27:72.19:1483,72,0	0/0:5,0:8:0.47:0,0,1	1/1:5,15:36:3.01:35,3,0	1/1:23,0:23:56.99:1591,57,0	0/0:34,0:37:89.23:0,89,3268	0/0:32,0:34:84.21:0,84,3101	0/0:20,0:24:60.17:0,60,1796	1/1:9,0:36:13.84:921,14,0	1/1:16,0:16:35.94:581,36,0	0/0:22,0:22:28.20:0,28,626	0/0:20,0:21:53.91:0,54,1348	0/0:48,0:50:99:0,101,3043	1/1:26,0:25:4.29:39,4,0	1/1:17,0:17:17.43:246,17,0	1/1:31,0:31:15.60:161,16,0	0/1:7,0:34:0:0,0,0	0/1:26,0:26:99:212,0,1181	0/0:17,0:17:45.96:0,46,1487	0/0:6,0:11:14.99:0,15,350
chr10	72415998	.	C	CAG	949.97	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=9.020;DP=735;FS=6.380;HRun=0;HaplotypeScore=124.3723;InbreedingCoeff=0.2296;MQ=52.58;MQ0=14;MQRankSum=-3.342;QD=3.65;ReadPosRankSum=-1.633;VQSLOD=1.9742;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:43,0:41:7.84:196,8,0	0/0:14,0:14:39.05:0,39,477	0/0:31,0:7:14.86:0,15,118	0/0:21,0:6:4.54:0,5,57	0/0:25,0:24:56.83:0,57,595	0/0:22,0:22:53.12:0,53,674	0/0:42,0:42:99:0,99,1078	0/0:17,0:16:44.77:0,45,404	0/0:27,0:27:69.09:0,69,877	0/1:28,0:28:93.42:309,0,93	1/1:11,0:7:2.56:10,3,0	0/1:33,0:33:13.80:14,0,30	0/1:23,0:23:99:130,0,108	0/0:37,0:37:88.39:0,88,1341	0/0:36,0:36:70.24:0,70,1067	0/0:25,0:25:65.68:0,66,734	1/1:33,0:32:14.85:124,15,0	0/1:15,0:15:12.90:136,0,13	0/0:22,0:21:59.74:0,60,563	0/0:21,0:21:37.83:0,38,580	0/0:56,0:56:99:0,135,1467	0/0:11,15:25:9:0,9,87	0/1:18,0:18:5.73:125,0,6	0/1:32,0:32:34.39:55,0,34	0/1:24,0:24:9.68:10,0,18	0/0:24,0:24:4.98:0,5,584	0/0:19,0:19:37.27:0,37,631	0/0:10,0:10:17.98:0,18,184
chr10	72416612	.	CAAAAAAAAGAAAAGAAAAAAG	C	415.26	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.194;DP=564;FS=5.339;HRun=0;HaplotypeScore=282.8745;InbreedingCoeff=0.7122;MQ=57.30;MQ0=11;MQRankSum=-3.214;QD=69.21;ReadPosRankSum=1.559;VQSLOD=2.3822;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:24:29.05:0,29,1034	0/0:10,0:10:15.05:0,15,905	0/0:10,0:3:6.46:0,6,70	0/0:10,0:1:0.47:0,0,1	0/0:35,0:36:87.28:0,87,6830	0/0:14,0:14:36.11:0,36,2720	0/0:20,0:20:42.14:0,42,3656	0/0:29,0:29:55.53:0,56,3583	0/0:15,0:14:21.07:0,21,1300	0/0:26,0:27:48.16:0,48,3529	0/0:21,0:21:42.13:0,42,2681	0/0:17,0:17:24.08:0,24,2084	0/0:14,0:14:21.06:0,21,1600	0/0:16,0:16:36.12:0,36,3086	0/0:31,0:32:60.21:0,60,5029	0/0:35,0:35:72.25:0,72,6530	0/0:38,0:38:81.26:0,81,6555	1/1:1,5:6:9.03:498,9,0	0/0:16,0:15:33.08:0,33,2214	0/0:24,0:24:48.16:0,48,4336	0/0:17,0:16:21.07:0,21,1793	0/0:20,0:20:36.08:0,36,2344	0/0:24,0:24:45.15:0,45,3316	0/0:20,0:20:45.15:0,45,3787	0/0:24,0:24:60.21:0,60,5012	0/0:22,0:20:30.10:0,30,2780	0/0:18,0:18:39.13:0,39,2686	0/0:2,0:2:6.02:0,6,584
chr10	72416621	.	GAAAAGAA	G	780.89	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=6.070;DP=556;FS=0.000;HRun=0;HaplotypeScore=118.8424;InbreedingCoeff=0.7647;MQ=57.85;MQ0=14;MQRankSum=-6.303;QD=15.94;ReadPosRankSum=1.097;VQSLOD=2.7455;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:22:33.11:745,33,0	0/0:10,0:10:21.07:0,21,658	0/0:19,0:5:10.53:0,11,148	0/1:19,0:6:5.47:5,0,12	0/0:37,0:37:99:0,99,3296	0/0:17,0:17:48.15:0,48,1583	0/0:16,0:16:45.15:0,45,1640	0/0:31,0:31:68.25:0,68,2082	0/0:13,0:12:27.09:0,27,774	0/0:26,0:26:60.20:0,60,1980	0/0:21,0:21:51.16:0,51,1519	0/0:17,0:17:39.13:0,39,1273	0/0:12,0:12:27.07:0,27,823	0/0:18,0:18:48.16:0,48,1572	0/0:28,0:28:75.25:0,75,2529	0/0:30,0:30:81.27:0,81,2903	0/0:35,0:35:87.26:0,87,2913	1/1:5,0:5:9.03:149,9,0	0/0:18,0:17:42.11:0,42,1189	0/0:24,0:24:57.19:0,57,2105	0/0:13,0:13:24.08:0,24,761	0/0:16,0:16:36.08:0,36,1008	0/0:19,0:19:48.16:0,48,1507	0/0:20,0:20:48.16:0,48,1673	0/0:26,0:26:75.26:0,75,2578	0/0:18,0:16:42.14:0,42,1492	0/0:19,0:19:48.16:0,48,1460	0/0:4,0:3:9.03:0,9,303
chr10	72416920	.	T	TTAA	6791.54	PASS	AB=0.889;AC=23;AF=0.411;AN=56;BaseQRankSum=12.274;DP=469;FS=0.000;HRun=0;HaplotypeScore=94.9372;InbreedingCoeff=0.8879;MQ=73.87;MQ0=1;MQRankSum=-4.330;QD=34.65;ReadPosRankSum=1.154;VQSLOD=5.3265;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:45:99:1136,122,0	0/1:7,1:8:46.32:46,0,363	0/0:36,0:16:25.79:0,26,298	0/0:19,0:11:23.69:0,24,265	0/0:17,0:17:48.16:0,48,852	0/0:24,0:24:72.23:0,72,1299	0/0:12,0:12:36.12:0,36,665	0/0:23,0:23:69.21:0,69,1167	0/0:8,0:8:21.04:0,21,321	1/1:14,1:15:38.80:587,39,0	1/1:19,2:21:59.64:837,60,0	1/1:6,0:6:15.84:117,16,0	1/1:7,0:8:22.16:184,22,0	0/0:10,0:10:30.05:0,30,466	0/0:17,0:17:51.13:0,51,804	0/0:12,0:12:36.12:0,36,661	1/1:26,0:26:78.22:1352,78,0	1/1:24,4:28:83.98:1308,84,0	0/0:18,0:18:51.14:0,51,857	0/0:13,0:13:39.11:0,39,662	0/0:11,0:11:33.08:0,33,546	1/1:1,0:1:3.01:30,3,0	1/1:9,0:9:8.97:184,9,0	1/1:15,0:16:40.72:338,41,0	1/1:13,0:13:39.13:674,39,0	0/0:20,0:20:17.99:0,18,930	0/0:20,0:20:57.19:0,57,1033	0/0:11,0:11:33.11:0,33,607
chr10	72416927	.	ATTT	A	1729.24	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=8.588;DP=453;FS=0.462;HRun=8;HaplotypeScore=106.8626;InbreedingCoeff=0.8503;MQ=76.29;MQ0=1;MQRankSum=-4.204;QD=14.06;ReadPosRankSum=0.090;VQSLOD=0.4759;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:45:62.54:0,63,545	0/0:10,0:10:27.56:0,28,545	0/0:36,0:16:22.89:0,23,352	0/1:23,0:12:2.39:2,0,65	0/0:16,0:16:48.16:0,48,959	0/0:25,0:25:75.26:0,75,1605	0/0:13,0:13:39.13:0,39,815	0/0:22,0:22:57.14:0,57,1025	0/0:6,0:6:12.04:0,12,259	1/1:14,3:17:37.88:355,38,0	1/1:14,2:18:32.29:292,32,0	0/0:5,0:5:13.37:0,13,94	0/0:7,0:7:4.86:0,5,89	0/0:8,0:8:24.08:0,24,487	0/0:13,0:13:39.13:0,39,843	0/0:12,0:12:36.12:0,36,739	1/1:23,0:23:43.96:440,44,0	1/1:24,3:27:58.05:497,58,0	0/0:17,0:17:51.14:0,51,975	0/0:12,0:12:36.11:0,36,658	0/0:9,0:9:24.07:0,24,479	0/0:1,0:1:2.74:0,3,12	0/0:8,0:8:19.49:0,19,121	0/0:15,0:15:19.09:0,19,147	1/1:15,0:15:36.04:315,36,0	0/0:19,0:19:23.02:0,23,1035	0/0:20,0:20:57.09:0,57,1100	0/0:11,0:11:33.11:0,33,710
chr10	72417924	.	GTT	G	335.27	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.182;DP=548;FS=4.985;HRun=15;HaplotypeScore=76.6461;InbreedingCoeff=0.4698;MQ=49.07;MQ0=34;MQRankSum=1.192;QD=10.82;ReadPosRankSum=3.354;VQSLOD=2.7560;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,19:30:45.01:428,45,0	0/0:11,0:11:22.52:0,23,240	0/0:65,0:9:2.04:0,2,6	0/0:68,0:9:11.60:0,12,84	0/0:26,0:26:57.03:0,57,598	0/0:17,0:17:21.83:0,22,258	0/0:11,0:15:21.29:0,21,225	0/0:28,0:28:53.37:0,53,667	0/0:9,0:9:20.98:0,21,252	0/0:13,0:13:3.33:0,3,21	0/0:13,0:12:15.38:0,15,81	0/0:6,0:5:4.31:0,4,36	0/0:5,0:5:2.90:0,3,8	0/0:7,0:6:14.85:0,15,148	0/0:5,0:5:4.56:0,5,47	0/0:13,0:15:40.66:0,41,439	0/0:25,0:21:5.93:0,6,82	0/0:14,0:12:5.20:0,5,26	0/0:25,0:18:29.81:0,30,266	0/0:22,0:21:50.03:0,50,531	0/0:19,0:19:40.11:0,40,410	0/0:10,0:10:8.97:0,9,70	0/0:10,0:10:8.36:0,8,48	0/0:8,0:7:2.03:0,2,6	0/0:16,0:16:0:0,0,0	0/0:24,0:25:50.33:0,50,558	0/0:17,0:19:39.69:0,40,443	0/0:18,0:17:41.56:0,42,482
chr10	72418781	.	G	GA	5974.99	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-10.610;DP=583;FS=0.707;HRun=8;HaplotypeScore=58.6333;InbreedingCoeff=0.9731;MQ=65.78;MQ0=4;MQRankSum=1.652;QD=25.21;ReadPosRankSum=3.847;VQSLOD=5.5129;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:36:90.06:1003,90,0	0/0:10,0:10:27.01:0,27,247	0/0:19,0:15:14.73:0,15,210	0/0:16,1:9:8.76:0,9,120	0/0:35,1:36:67.43:0,67,870	0/0:19,0:19:54:0,54,488	0/0:25,0:25:69.03:0,69,631	0/0:32,0:30:81.04:0,81,740	0/0:18,0:18:42.01:0,42,384	1/1:3,19:22:54.16:623,54,0	1/1:5,17:22:45.09:504,45,0	1/1:2,15:17:42.12:484,42,0	1/1:3,11:14:24.07:277,24,0	0/0:18,0:18:47.06:0,47,418	0/0:18,0:18:51.02:0,51,466	0/0:17,0:17:42.01:0,42,384	1/1:5,28:33:50.21:773,50,0	1/1:2,16:18:45.13:519,45,0	0/0:16,0:16:39.49:0,39,358	0/0:27,0:26:72.03:0,72,659	0/0:19,0:19:54.01:0,54,490	1/1:6,16:22:45.13:512,45,0	1/1:1,19:20:44.93:516,45,0	1/1:2,16:18:36.11:415,36,0	1/1:1,14:15:30.09:346,30,0	0/0:35,0:35:75.18:0,75,826	0/0:17,0:16:48.02:0,48,439	0/0:3,0:3:5.92:0,6,55
chr10	72419446	.	T	TA	79.63	PASS	AB=1.000;AC=13;AF=0.260;AN=50;BaseQRankSum=4.287;DP=302;FS=0.000;HRun=0;HaplotypeScore=40.0158;InbreedingCoeff=0.6497;MQ=60.84;MQ0=5;MQRankSum=2.173;QD=4.19;ReadPosRankSum=-1.978;VQSLOD=2.4462;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,6:7:2.94:18,3,0	0/0:6,0:6:18.05:0,18,235	0/0:9,0:7:16.24:0,16,123	0/0:6,0:4:5.25:0,5,54	0/0:26,0:25:56.60:0,57,654	0/0:21,0:21:50.94:0,51,599	0/0:15,0:15:35.23:0,35,410	0/0:26,0:25:74.91:0,75,835	0/0:10,0:10:26.91:0,27,306	1/1:2,0:2:6.01:57,6,0	1/1:1,0:1:2.99:23,3,0	0/1:2,0:2:13.79:19,0,14	./.	0/0:16,0:16:38.86:0,39,380	0/0:22,0:22:62.90:0,63,666	0/0:23,0:23:54.08:0,54,678	1/1:1,2:2:3:26,3,0	0/0:1,0:1:0:0,0,0	0/0:14,0:14:29.69:0,30,334	0/0:24,0:24:58.57:0,59,649	0/0:17,0:16:39.55:0,40,501	./.	1/1:2,0:1:3:25,3,0	./.	1/1:2,0:2:6.01:55,6,0	0/0:20,0:19:48.31:0,48,493	0/0:14,0:14:42:0,42,457	0/0:12,0:12:36:0,36,422
chr10	72419644	.	A	AT	6333.45	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.596;DP=520;FS=13.952;HRun=0;HaplotypeScore=90.4689;InbreedingCoeff=0.9983;MQ=69.17;MQ0=0;MQRankSum=-4.074;QD=29.19;ReadPosRankSum=2.841;VQSLOD=3.7957;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,40:46:99:1317,123,0	0/0:10,0:10:30.10:0,30,419	0/0:19,0:19:51.12:0,51,652	0/0:14,0:15:39.09:0,39,507	0/0:22,0:22:66.22:0,66,922	0/0:15,0:15:45.15:0,45,629	0/0:15,0:15:42.14:0,42,587	0/0:25,0:25:72.20:0,72,940	0/0:19,0:19:57.18:0,57,780	1/1:3,13:16:42.10:492,42,0	1/1:1,18:19:51.12:552,51,0	1/1:0,10:10:30.07:324,30,0	1/1:1,7:8:18.03:183,18,0	0/0:11,0:11:33.10:0,33,444	0/0:33,0:33:96.30:0,96,1321	0/0:17,0:17:48.15:0,48,655	1/1:1,25:26:75.16:809,75,0	1/1:3,18:21:57.16:648,57,0	0/0:21,0:20:57.19:0,57,794	0/0:13,0:13:36.12:0,36,503	0/0:27,0:27:81.25:0,81,1113	1/1:0,13:13:36.08:389,36,0	1/1:1,27:28:72.09:783,72,0	1/1:1,14:15:33.06:342,33,0	1/1:1,14:15:45.11:494,45,0	0/0:17,0:17:51.17:0,51,711	0/0:15,0:15:42.11:0,42,549	0/0:8,0:8:24.08:0,24,336
chr10	72419645	.	C	CT	6464.11	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=17.159;DP=528;FS=12.944;HRun=0;HaplotypeScore=90.9578;InbreedingCoeff=0.9982;MQ=67.31;MQ0=0;MQRankSum=-6.049;QD=29.25;ReadPosRankSum=2.293;VQSLOD=4.0134;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,40:46:99:1268,123,0	0/0:10,0:10:30.10:0,30,418	0/0:20,0:19:54.17:0,54,724	0/0:15,0:14:33.08:0,33,442	0/0:23,0:23:66.22:0,66,922	0/0:15,0:15:45.15:0,45,628	0/0:15,0:15:45.11:0,45,607	0/0:23,0:23:63.14:0,63,855	0/0:20,0:20:57.19:0,57,793	1/1:3,13:16:45.11:508,45,0	1/1:1,18:19:54.13:598,54,0	1/1:1,10:11:30.07:324,30,0	1/1:2,7:9:18.02:182,18,0	0/0:11,0:11:33.11:0,33,460	0/0:34,0:34:93.31:0,93,1299	0/0:16,0:16:45.15:0,45,628	1/1:2,25:27:75.19:832,75,0	1/1:4,18:22:63.13:699,63,0	0/0:22,0:21:60.14:0,60,798	0/0:13,0:13:36.12:0,36,503	0/0:27,0:27:78.26:0,78,1089	1/1:1,13:14:36.08:389,36,0	1/1:1,27:28:75.17:827,75,0	1/1:1,14:15:36.06:369,36,0	1/1:0,14:14:42.11:469,42,0	0/0:18,0:18:51.16:0,51,695	0/0:15,0:15:39.11:0,39,524	0/0:10,0:10:24.08:0,24,335
chr10	72419738	.	A	AT	4572.59	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=-8.090;DP=471;FS=0.822;HRun=0;HaplotypeScore=48.4296;InbreedingCoeff=0.8253;MQ=70.53;MQ0=1;MQRankSum=-0.185;QD=25.55;ReadPosRankSum=0.352;VQSLOD=5.5063;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:11.80:12,0,70	0/0:5,0:5:15.04:0,15,192	0/0:10,0:9:3.85:0,4,268	0/0:13,0:9:17.98:0,18,182	0/0:14,0:14:42.10:0,42,521	0/0:17,0:17:51.16:0,51,685	0/0:13,0:13:39.11:0,39,499	0/0:28,0:28:80.37:0,80,992	0/0:19,0:19:53.42:0,53,723	1/1:2,21:23:60.09:765,60,0	1/1:0,17:17:51.17:707,51,0	1/1:0,13:13:33.11:459,33,0	1/1:1,13:14:30.10:418,30,0	0/0:23,0:23:66.18:0,66,869	0/0:28,0:28:84.23:0,84,1102	0/0:12,0:12:33.11:0,33,459	1/1:0,25:25:63.21:878,63,0	1/1:1,12:13:30.10:418,30,0	0/0:22,0:22:66.07:0,66,857	0/0:12,0:12:30.97:0,31,388	0/0:15,0:15:39.10:0,39,496	1/1:0,6:6:18.06:250,18,0	1/1:0,10:10:24.08:335,24,0	1/1:4,5:9:23.98:282,24,0	0/1:16,0:16:13.50:48,0,14	0/0:18,0:18:54.05:0,54,693	0/0:30,0:30:90.26:0,90,1184	0/0:13,0:13:36.09:0,36,453
chr10	72422142	.	T	TA	11636.80	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-1.747;DP=734;FS=6.769;HRun=3;HaplotypeScore=76.2260;InbreedingCoeff=0.9997;MQ=76.82;MQ0=0;MQRankSum=-3.418;QD=37.54;ReadPosRankSum=3.673;VQSLOD=5.2826;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,48:49:99:1723,123,0	0/0:12,0:12:27.08:0,27,324	0/0:15,0:15:42.12:0,42,490	0/0:22,0:22:45.68:0,46,583	0/0:25,0:25:72.21:0,72,852	0/0:29,0:29:87.27:0,87,1042	0/0:26,0:26:78.23:0,78,925	0/0:37,0:37:96.28:0,96,1141	0/0:29,0:29:84.25:0,84,996	1/1:2,23:25:69.23:967,69,0	1/1:2,20:22:60.20:840,60,0	1/1:1,20:21:60.20:840,60,0	1/1:2,26:28:69.23:966,69,0	0/0:25,0:25:75.22:0,75,889	0/0:23,0:23:66.18:0,66,769	0/0:21,0:20:57.16:0,57,673	1/1:2,35:37:99:1428,102,0	1/1:0,23:23:63.21:882,63,0	0/0:28,0:28:81.25:0,81,972	0/0:26,0:26:69.21:0,69,827	0/0:40,0:40:99:0,111,1316	1/1:2,18:20:54.18:756,54,0	1/1:2,22:24:66.22:924,66,0	1/1:0,34:34:96.32:1344,96,0	1/1:2,25:27:69.23:966,69,0	0/0:27,1:28:39.22:0,39,893	0/0:29,0:29:78.22:0,78,923	0/0:9,0:9:27.07:0,27,312
chr10	72423467	.	G	GGTGT	1743.42	PASS	AB=0.871;AC=11;AF=0.196;AN=56;BaseQRankSum=-2.085;DP=589;FS=1.321;HRun=0;HaplotypeScore=117.8414;InbreedingCoeff=0.5696;MQ=61.50;MQ0=10;MQRankSum=-0.583;QD=12.54;ReadPosRankSum=-0.215;VQSLOD=3.4095;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:33:56.88:0,57,763	0/1:6,0:6:9.94:10,0,131	0/0:37,0:14:5.98:0,6,68	0/0:33,0:19:15.01:0,15,150	0/0:21,0:21:32.44:0,32,514	0/0:17,0:18:11.47:0,11,318	0/0:16,0:19:14.32:0,14,255	0/0:27,0:26:0.07:0,0,211	0/0:21,0:21:28.35:0,28,428	1/1:10,4:17:24.53:311,25,0	1/1:4,7:15:15.05:358,15,0	0/0:19,0:21:32.71:0,33,539	0/0:16,0:17:30.03:0,30,426	0/0:9,0:10:15.04:0,15,219	0/0:27,0:27:43.37:0,43,627	0/0:13,0:13:17.95:0,18,255	0/1:21,18:43:3.11:826,0,3	1/1:11,1:20:12.40:170,12,0	0/0:11,0:9:11.91:0,12,92	0/1:15,0:19:15.81:16,0,446	0/0:36,0:34:12.01:0,12,527	0/0:13,0:13:11.72:0,12,143	0/0:8,0:8:14.98:0,15,237	0/0:26,0:28:54.13:0,54,803	1/1:8,10:19:9.03:215,9,0	0/0:9,0:10:15.03:0,15,198	0/0:22,0:22:4.09:0,4,312	0/0:21,0:24:33.04:0,33,436
chr10	72423902	.	T	TGG	12453.59	PASS	AB=0.906;AC=23;AF=0.411;AN=56;BaseQRankSum=-13.524;DP=645;FS=7.655;HRun=3;HaplotypeScore=79.0287;InbreedingCoeff=0.9247;MQ=80.47;MQ0=1;MQRankSum=-3.617;QD=41.51;ReadPosRankSum=3.904;VQSLOD=4.0155;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,50:55:99:2470,135,0	0/0:8,0:8:21.07:0,21,289	0/0:24,0:24:60.20:0,60,839	0/0:20,0:20:54.17:0,54,730	0/0:22,0:22:57.17:0,57,796	0/0:22,0:22:63.21:0,63,882	0/0:29,0:29:78.23:0,78,1048	0/0:21,0:20:60.19:0,60,816	0/0:21,0:21:57.16:0,57,761	1/1:1,23:24:69.21:1202,69,0	1/1:1,8:9:24.08:439,24,0	1/1:0,23:23:63.17:1119,63,0	1/1:2,18:20:51.17:935,51,0	0/0:26,0:26:73.47:0,73,985	0/0:21,0:21:60.19:0,60,820	0/0:21,0:21:63.20:0,63,864	1/1:1,32:33:87.26:1560,87,0	1/1:1,29:29:75.26:1375,75,0	0/0:21,0:21:54.15:0,54,734	0/0:15,0:15:42.14:0,42,582	0/0:39,0:39:99:0,102,1400	1/1:2,10:12:24.08:440,24,0	1/1:0,16:16:42.14:768,42,0	1/1:4,30:34:63.32:1464,63,0	1/1:2,13:15:33.11:605,33,0	0/1:26,3:29:77.78:78,0,1002	0/0:27,0:27:81.27:0,81,1131	0/0:8,0:8:24.08:0,24,335
chr10	72424048	.	A	AG	3485.23	PASS	AB=0.900;AC=11;AF=0.196;AN=56;BaseQRankSum=-12.268;DP=553;FS=1.980;HRun=0;HaplotypeScore=60.9344;InbreedingCoeff=0.8754;MQ=59.42;MQ0=6;MQRankSum=4.119;QD=26.60;ReadPosRankSum=6.428;VQSLOD=4.4891;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,39:40:77.07:1005,77,0	0/1:8,1:9:15.03:15,0,199	0/0:53,0:15:18.63:0,19,240	0/0:37,0:13:14.50:0,14,86	0/0:26,0:26:75.05:0,75,881	0/0:13,0:13:25.59:0,26,374	0/0:16,0:16:47.57:0,48,533	0/0:13,0:13:27.06:0,27,322	0/0:28,0:28:78.15:0,78,960	1/1:1,18:19:50.56:621,51,0	1/1:1,12:13:35.36:422,35,0	0/0:17,0:17:23.52:0,24,160	0/0:14,0:14:14.65:0,15,118	0/0:15,0:15:42.04:0,42,453	0/0:17,0:17:50.71:0,51,558	0/0:12,0:12:33.10:0,33,428	1/1:2,34:36:87.09:1115,87,0	0/0:11,0:11:17.39:0,17,109	0/0:20,0:20:52.31:0,52,597	0/0:20,0:20:56.56:0,57,595	0/0:12,0:12:32.62:0,33,360	0/0:20,0:18:47.09:0,47,366	0/0:12,0:12:27.28:0,27,188	0/0:11,0:11:18.95:0,19,144	1/1:1,13:14:24.07:307,24,0	0/0:20,1:21:21.26:0,21,657	0/0:26,0:25:72.96:0,73,820	0/0:8,0:8:24.01:0,24,243
chr10	72424149	.	GCTT	G	1853.62	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=8.042;DP=463;FS=20.827;HRun=0;HaplotypeScore=91.7982;InbreedingCoeff=0.6525;MQ=73.56;MQ0=1;MQRankSum=-2.483;QD=10.36;ReadPosRankSum=7.228;VQSLOD=1.4443;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:32.40:130,0,32	0/0:5,0:5:14.54:0,15,251	0/0:20,0:16:35.79:0,36,638	0/0:19,0:19:51.51:0,52,842	0/0:14,0:14:33.56:0,34,579	0/0:20,0:20:57.19:0,57,995	0/0:17,0:17:45.12:0,45,807	0/0:12,0:12:33.11:0,33,611	0/0:16,0:16:45.15:0,45,849	0/0:22,0:22:6.86:0,7,76	0/1:19,0:19:40.84:41,0,50	1/1:15,2:17:26.44:281,26,0	1/1:14,0:14:27.05:286,27,0	0/0:17,0:17:48.15:0,48,781	0/0:17,0:17:51.16:0,51,849	0/0:13,0:13:33.07:0,33,566	0/1:30,0:30:5.51:6,0,79	1/1:10,0:10:24.05:259,24,0	0/0:22,0:22:60.19:0,60,1013	0/0:12,0:12:33.11:0,33,524	0/0:15,0:15:45.12:0,45,787	1/1:14,0:14:33.08:354,33,0	1/1:18,1:19:9.22:239,9,0	1/1:17,2:19:39.09:443,39,0	0/1:10,0:9:5.81:6,0,35	0/0:18,0:18:48.63:0,49,835	0/0:18,0:18:54.18:0,54,1026	0/0:6,0:6:15.05:0,15,292
chr10	72424150	.	CT	C	4414.63	PASS	AB=0.833;AC=23;AF=0.411;AN=56;BaseQRankSum=10.135;DP=457;FS=29.259;HRun=2;HaplotypeScore=69.2367;InbreedingCoeff=0.9226;MQ=72.51;MQ0=1;MQRankSum=-3.515;QD=21.53;ReadPosRankSum=8.216;VQSLOD=2.8889;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,2:27:68.04:531,68,0	0/1:4,1:5:23.59:24,0,142	0/0:19,0:14:30.90:0,31,328	0/0:19,0:19:49.95:0,50,518	0/0:13,0:13:30:0,30,319	0/0:19,0:19:55.50:0,55,582	0/0:17,0:17:40.89:0,41,479	0/0:11,1:12:33.01:0,33,349	0/0:15,0:15:45.05:0,45,487	1/1:2,18:22:57.07:635,57,0	1/1:7,10:20:57.08:626,57,0	1/1:14,2:16:26.58:191,27,0	1/1:13,1:14:25.75:197,26,0	0/0:18,0:18:42.40:0,42,406	0/0:17,0:17:34.98:0,35,415	0/0:13,0:13:25.69:0,26,311	1/1:0,28:29:60.06:744,60,0	1/1:10,0:10:23.94:193,24,0	0/0:21,0:21:34.95:0,35,519	0/0:12,0:12:32.92:0,33,289	0/0:16,0:16:40.12:0,40,445	1/1:13,1:14:32.87:256,33,0	1/1:17,2:19:53.62:408,54,0	1/1:16,3:19:38.64:302,39,0	1/1:0,10:9:24.08:308,24,0	0/0:18,0:18:24.28:0,24,427	0/0:18,0:18:54.08:0,54,616	0/0:5,0:5:15.02:0,15,179
chr10	72424151	.	TTCC	T	4470.75	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=8.553;DP=455;FS=22.685;HRun=0;HaplotypeScore=82.3235;InbreedingCoeff=0.9712;MQ=71.36;MQ0=1;MQRankSum=-1.547;QD=22.47;ReadPosRankSum=8.502;VQSLOD=2.5665;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,2:26:53.75:459,54,0	0/0:5,0:5:3.04:0,3,205	0/0:17,0:12:36.03:0,36,564	0/0:19,0:19:50.88:0,51,783	0/0:12,0:12:30.03:0,30,444	0/0:19,0:19:56.98:0,57,850	0/0:17,0:17:45.07:0,45,801	0/0:12,0:12:33.05:0,33,486	0/0:15,0:15:45.11:0,45,815	1/1:20,0:21:36.03:274,36,0	1/1:19,0:20:35.66:236,36,0	1/1:4,11:16:26.88:411,27,0	1/1:1,13:14:27.09:470,27,0	0/0:18,0:18:50.85:0,51,618	0/0:18,0:18:54:0,54,732	0/0:13,0:13:33.05:0,33,544	1/1:30,0:30:50.71:219,51,0	1/1:0,10:10:24.08:437,24,0	0/0:21,0:21:60.04:0,60,744	0/0:12,0:12:32.82:0,33,373	0/0:16,0:16:44.91:0,45,727	1/1:1,12:14:33.11:571,33,0	1/1:11,7:19:50.83:616,51,0	1/1:5,14:19:39.13:691,39,0	1/1:10,0:9:20.55:87,21,0	0/0:18,0:18:24.35:0,24,595	0/0:19,0:19:54.12:0,54,978	0/0:5,0:5:15.03:0,15,278
chr10	72424152	.	TC	T	1067.51	PASS	AB=0.887;AC=28;AF=0.500;AN=56;BaseQRankSum=9.121;DP=450;FS=3.180;HRun=12;HaplotypeScore=78.0014;InbreedingCoeff=0.4997;MQ=72.11;MQ0=1;MQRankSum=-1.645;QD=3.63;ReadPosRankSum=6.305;VQSLOD=0.1746;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:21.99:90,22,0	0/0:5,0:5:0.10:0,0,67	0/0:17,1:13:5.57:0,6,97	0/0:18,0:18:21.16:0,21,135	0/0:10,1:12:11.97:0,12,112	0/0:18,1:19:0.77:0,1,171	0/0:15,1:17:6.51:0,7,208	0/0:13,0:13:12.02:0,12,122	0/0:14,0:14:19.39:0,19,177	1/1:21,0:21:35.36:157,35,0	1/1:20,0:20:37.91:187,38,0	1/1:16,0:16:16.44:49,16,0	1/1:14,0:14:19.25:58,19,0	0/1:12,3:16:32.25:32,0,94	0/1:16,2:18:25.79:26,0,115	0/1:10,3:13:5.30:5,0,120	1/1:30,0:30:52.28:249,52,0	1/1:10,0:10:17.58:53,18,0	0/1:20,1:21:28.55:29,0,85	0/1:9,0:11:0.82:1,0,20	0/1:15,0:16:8.91:9,0,109	1/1:15,0:15:25.96:80,26,0	1/1:18,0:18:17.28:53,17,0	1/1:19,0:19:27.18:82,27,0	1/1:10,0:9:22.32:104,22,0	0/0:16,0:16:9.01:0,9,86	0/0:19,0:19:27:0,27,256	0/0:5,0:5:8.95:0,9,73
chr10	72424877	.	CAAA	C	3414.24	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.640;DP=758;FS=4.468;HRun=3;HaplotypeScore=128.3538;InbreedingCoeff=0.9999;MQ=86.95;MQ0=0;MQRankSum=-3.943;QD=33.80;ReadPosRankSum=2.030;VQSLOD=1.9340;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,3372	0/0:17,0:17:51.18:0,51,1247	0/0:29,0:29:87.30:0,87,2011	0/0:27,0:27:78.27:0,78,1802	0/0:21,0:21:63.22:0,63,1553	0/0:25,0:25:75.26:0,75,1846	0/0:25,0:25:75.24:0,75,1799	0/0:28,0:28:84.29:0,84,2071	0/0:36,0:36:99:0,108,2545	0/0:24,0:24:72.25:0,72,1772	0/0:16,0:16:48.16:0,48,1112	1/1:2,22:24:60.18:812,60,0	1/1:1,23:24:72.22:1008,72,0	0/0:25,0:25:72.25:0,72,1751	0/0:37,0:37:99:0,111,2604	0/0:29,0:29:87.28:0,87,2096	0/0:37,0:37:99:0,111,2709	0/0:32,0:32:96.33:0,96,2348	0/0:22,0:22:66.23:0,66,1589	0/0:19,0:19:57.19:0,57,1320	0/0:53,0:53:99:0,160,3848	1/1:0,14:14:30.09:384,30,0	1/1:2,12:14:39.08:428,39,0	1/1:0,24:25:54.04:782,54,0	0/0:26,0:26:78.27:0,78,1899	0/0:34,0:34:99:0,102,2471	0/0:32,0:32:93.32:0,93,2263	0/0:17,0:17:51.18:0,51,1184
chr10	72424881	.	T	TG	2379.76	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.936;DP=753;FS=5.999;HRun=0;HaplotypeScore=101.1022;InbreedingCoeff=0.9998;MQ=87.48;MQ0=0;MQRankSum=-4.937;QD=23.56;ReadPosRankSum=1.571;VQSLOD=4.9262;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,1888	0/0:17,0:17:51.17:0,51,713	0/0:30,0:30:90.30:0,90,1239	0/0:28,0:28:81.27:0,81,1131	0/0:22,0:22:66.20:0,66,905	0/0:25,0:25:75.24:0,75,1032	0/0:25,0:25:75.25:0,75,1048	0/0:31,0:31:93.28:0,93,1254	0/0:34,0:34:99:0,99,1383	0/0:25,0:25:75.08:0,75,1018	0/0:14,0:14:42.14:0,42,587	1/1:2,22:24:62.98:620,63,0	1/1:1,23:24:72.04:769,72,0	0/0:25,0:25:69.23:0,69,965	0/0:34,0:34:99:0,102,1407	0/0:29,0:29:87.26:0,87,1183	0/0:37,0:37:99:0,111,1512	0/0:33,0:33:99:0,99,1382	0/0:23,0:23:63.07:0,63,870	0/0:18,0:18:54.18:0,54,754	0/0:51,0:51:99:0,154,2140	1/1:0,14:14:29.90:271,30,0	1/1:1,12:13:35.65:273,36,0	1/1:1,24:26:56.61:622,57,0	0/0:25,0:25:75.23:0,75,1029	0/0:34,0:34:99:0,99,1354	0/0:30,0:30:87.29:0,87,1215	0/0:17,0:17:51.17:0,51,711
chr10	72425527	.	AACACACAC	A	98.78	PASS	AB=0.780;AC=8;AF=0.167;AN=48;BaseQRankSum=2.155;DP=454;FS=4.405;HRun=0;HaplotypeScore=115.9374;InbreedingCoeff=0.3966;MQ=71.66;MQ0=13;MQRankSum=-1.031;QD=1.25;ReadPosRankSum=-1.060;VQSLOD=2.1342;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:21.07:0,21,653	0/0:5,0:5:3.01:0,3,100	./.	./.	0/0:18,0:18:9.01:0,9,236	0/0:10,0:10:12.02:0,12,287	0/0:13,0:15:15.05:0,15,424	./.	0/0:13,0:15:21.05:0,21,552	0/0:15,0:14:12.04:0,12,312	0/0:16,0:15:12.02:0,12,191	0/1:9,5:14:29.51:44,0,30	0/1:11,3:14:4.98:67,0,5	0/0:10,0:9:0:0,0,0	0/0:15,0:15:18.52:0,19,475	0/0:16,0:15:21.07:0,21,693	0/0:14,0:15:12.04:0,12,293	0/0:16,0:15:8.95:0,9,88	0/0:17,0:16:21.90:0,22,384	0/0:18,0:21:4.17:0,4,31	0/0:24,0:24:18.04:0,18,394	1/1:12,6:18:2.90:16,3,0	1/1:11,4:15:0.08:69,0,0	1/1:13,5:18:2.92:17,3,0	0/0:12,0:12:12.03:0,12,277	0/0:15,0:15:15:0,15,355	0/0:15,0:18:33.06:0,33,548	./.
chr10	72425732	.	A	AAC	964.07	PASS	AB=0.822;AC=21;AF=0.375;AN=56;BaseQRankSum=2.549;DP=439;FS=10.162;HRun=0;HaplotypeScore=66.4682;InbreedingCoeff=0.6217;MQ=51.51;MQ0=58;MQRankSum=-1.260;QD=4.59;ReadPosRankSum=2.427;VQSLOD=0.7099;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:2,0:7:26.36:31,0,26	0/0:8,0:7:20.87:0,21,185	0/1:32,0:9:1.78:2,0,39	0/0:17,0:7:9.38:0,9,64	0/0:23,0:22:54.80:0,55,422	0/0:10,0:7:18.82:0,19,161	0/0:20,0:17:39.50:0,39,351	0/0:28,0:26:65.93:0,66,523	0/0:6,0:5:14.79:0,15,117	1/1:7,14:18:33.92:255,34,0	1/1:8,2:17:4.93:83,5,0	1/1:13,0:11:21.54:121,22,0	1/1:15,0:11:18.09:87,18,0	0/0:6,0:7:17.42:0,17,128	0/1:10,0:7:8.68:9,0,43	0/0:10,0:10:29.31:0,29,241	1/1:9,7:9:8.93:83,9,0	1/1:7,0:9:8.36:66,8,0	0/0:20,0:14:37.83:0,38,315	0/0:17,0:16:42.59:0,43,312	0/0:12,0:8:12.90:0,13,106	1/1:21,0:21:12.90:184,13,0	0/1:17,0:16:9.50:93,0,9	1/1:6,0:5:10.94:77,11,0	0/1:2,10:14:3.16:69,0,3	0/0:23,0:18:48.94:0,49,346	0/0:16,0:14:36.88:0,37,265	0/0:10,0:7:19.69:0,20,123
chr10	72426289	.	C	CT	4852.60	PASS	AB=0.929;AC=19;AF=0.339;AN=56;BaseQRankSum=-8.862;DP=561;FS=9.019;HRun=7;HaplotypeScore=55.7507;InbreedingCoeff=0.9416;MQ=69.91;MQ0=0;MQRankSum=0.728;QD=26.09;ReadPosRankSum=0.360;VQSLOD=5.1604;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,913	0/0:14,0:14:39.05:0,39,372	0/1:12,1:12:3.06:19,0,3	0/0:12,0:9:14.82:0,15,104	0/0:29,0:29:78.99:0,79,746	0/0:20,0:20:57.06:0,57,539	0/0:16,0:16:42.05:0,42,399	0/0:31,0:31:81.01:0,81,742	0/0:17,0:17:44.99:0,45,429	1/1:1,25:26:75.16:850,75,0	1/1:3,23:26:60.49:683,60,0	1/1:1,10:11:24.07:290,24,0	1/1:1,18:19:39.12:470,39,0	0/0:25,0:25:57.04:0,57,532	0/0:13,0:13:32.97:0,33,306	0/0:11,0:11:21.02:0,21,199	1/1:3,19:22:45.61:544,46,0	0/0:25,1:25:32.86:0,33,591	0/0:24,0:24:45.03:0,45,427	0/0:15,0:15:35.87:0,36,316	0/0:20,0:20:54.06:0,54,512	1/1:1,11:12:33.05:381,33,0	1/1:2,21:23:50.09:711,50,0	1/1:0,22:22:57.17:688,57,0	1/1:2,10:12:18.06:217,18,0	0/0:26,0:26:60.05:0,60,563	0/0:32,0:32:81.07:0,81,762	0/0:7,0:6:18.03:0,18,174
chr10	72426674	.	T	TA	2889.19	PASS	AB=0.947;AC=23;AF=0.411;AN=56;BaseQRankSum=-8.756;DP=254;FS=8.466;HRun=4;HaplotypeScore=22.9222;InbreedingCoeff=0.7414;MQ=66.79;MQ0=0;MQRankSum=1.132;QD=23.68;ReadPosRankSum=3.825;VQSLOD=1.6325;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:27.09:361,27,0	0/0:6,0:6:18.04:0,18,194	0/1:17,1:7:13.15:13,0,27	0/0:11,0:8:3.46:0,3,59	0/0:13,0:13:33.07:0,33,356	0/0:11,0:11:33.09:0,33,366	0/0:3,0:3:6.02:0,6,68	0/0:22,0:22:66.15:0,66,711	0/0:5,0:5:15.03:0,15,162	1/1:1,5:6:15.05:200,15,0	1/1:1,7:8:21.07:282,21,0	1/1:0,3:3:6.02:80,6,0	1/1:0,3:3:9.03:120,9,0	0/0:2,0:2:6.02:0,6,68	0/0:3,0:3:9.03:0,9,102	0/0:6,0:6:12.01:0,12,119	1/1:0,17:17:42.14:563,42,0	1/1:3,24:27:60.20:804,60,0	0/0:20,0:20:54.10:0,54,563	0/0:7,0:7:15.04:0,15,170	0/0:1,0:1:3.01:0,3,34	1/1:1,2:3:3.01:40,3,0	1/1:1,5:6:15.05:201,15,0	1/1:2,0:2:3:25,3,0	1/1:0,14:14:30.10:402,30,0	0/0:3,0:3:6.01:0,6,61	0/0:5,0:5:15.04:0,15,169	0/0:14,0:14:36.10:0,36,407
chr10	72427478	.	TA	T	3070.31	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=10.684;DP=454;FS=1.889;HRun=6;HaplotypeScore=44.0458;InbreedingCoeff=0.9681;MQ=63.46;MQ0=0;MQRankSum=1.313;QD=24.76;ReadPosRankSum=1.397;VQSLOD=3.3460;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,1618	0/0:8,0:8:24.07:0,24,302	0/0:7,0:5:15.04:0,15,183	0/0:8,0:5:8.39:0,8,90	0/0:18,0:18:44.86:0,45,537	0/0:17,0:17:42.12:0,42,538	0/0:5,0:5:15.05:0,15,197	0/0:32,0:32:81.26:0,81,1066	0/0:13,0:13:36.12:0,36,474	1/1:1,14:15:42.10:452,42,0	1/1:3,19:22:37.26:574,37,0	1/1:0,9:9:18.05:193,18,0	1/1:1,8:9:24.06:257,24,0	0/0:13,0:13:27.08:0,27,343	0/0:16,0:16:42.14:0,42,553	0/0:9,0:9:24.08:0,24,316	1/1:0,27:26:78.20:838,78,0	0/0:16,0:15:45.14:0,45,583	0/0:29,0:29:78.23:0,78,977	0/0:24,0:24:72.15:0,72,925	0/0:6,0:6:15.05:0,15,197	1/1:0,5:5:9.02:97,9,0	1/1:1,14:15:30.05:322,30,0	1/1:1,6:7:15.04:161,15,0	1/1:1,14:15:36.09:387,36,0	0/0:26,0:26:78.25:0,78,1026	0/0:20,0:20:51.15:0,51,655	0/0:19,0:19:57.19:0,57,750
chr10	72428761	.	CT	C	1356.09	PASS	AB=0.886;AC=26;AF=0.464;AN=56;BaseQRankSum=3.357;DP=453;FS=0.999;HRun=14;HaplotypeScore=55.0872;InbreedingCoeff=0.3783;MQ=63.78;MQ0=7;MQRankSum=3.350;QD=5.04;ReadPosRankSum=5.129;VQSLOD=1.4840;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:24:5.27:178,5,0	0/1:4,4:8:18.86:32,0,19	0/0:14,0:6:1.69:0,2,24	0/1:8,3:10:6.47:6,0,55	0/0:17,1:18:0.01:0,0,120	0/0:16,0:16:33.44:0,33,290	0/0:26,0:27:57.51:0,58,477	0/0:25,3:26:16.96:0,17,262	0/0:15,0:16:35.38:0,35,283	1/1:12,2:14:9.92:111,10,0	1/1:3,10:13:10.47:66,10,0	1/1:2,4:6:5.87:41,6,0	1/1:4,5:9:15.33:103,15,0	0/0:14,0:13:22.67:0,23,180	0/0:13,0:13:27.31:0,27,209	0/0:9,1:10:3.37:0,3,155	1/1:19,17:38:47.43:436,47,0	0/1:5,0:18:5.03:5,0,56	0/0:18,0:18:43.13:0,43,378	0/1:10,0:11:7.06:7,0,43	0/1:13,0:14:0.96:1,0,204	0/1:5,4:9:8.03:54,0,8	1/1:3,7:10:13.62:88,14,0	1/1:8,11:20:30.05:242,30,0	1/1:1,13:14:17.85:123,18,0	0/1:26,0:24:8.34:8,0,177	0/1:19,2:20:40.77:41,0,160	0/0:9,0:9:24.01:0,24,218
chr10	72428872	.	CT	C	581.55	PASS	AB=0.735;AC=12;AF=0.222;AN=54;BaseQRankSum=0.806;DP=333;FS=29.388;HRun=9;HaplotypeScore=48.0194;InbreedingCoeff=0.5038;MQ=42.35;MQ0=30;MQRankSum=-3.330;QD=7.65;ReadPosRankSum=2.577;VQSLOD=-0.0109;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:30:48.61:0,49,430	./.	0/0:5,0:1:3.01:0,3,31	0/0:5,0:2:0:0,0,0	0/0:11,0:10:12.03:0,12,130	0/0:14,0:13:26.82:0,27,289	0/0:21,0:21:35.07:0,35,338	0/0:24,0:18:22.75:0,23,232	0/0:7,0:7:9.03:0,9,104	1/1:4,8:12:23.63:219,24,0	1/1:3,3:5:8.89:82,9,0	0/1:7,5:12:21.75:89,0,22	0/0:8,0:8:10.74:0,11,56	0/0:7,0:5:6.02:0,6,69	0/0:15,0:13:11.98:0,12,115	0/0:17,0:16:27.72:0,28,257	0/1:20,9:27:29.26:156,0,29	0/0:18,0:16:25.55:0,26,256	0/0:21,0:19:28.74:0,29,260	0/0:3,0:3:3.01:0,3,35	0/0:7,1:6:11.62:0,12,114	1/1:2,1:2:0.90:24,1,0	1/1:2,4:6:12:109,12,0	0/0:3,2:5:3.40:0,3,17	1/1:4,4:7:5.81:55,6,0	0/0:16,0:15:29.99:0,30,315	0/0:15,1:16:7.90:0,8,313	0/0:1,0:1:3.01:0,3,35
chr10	72429116	.	A	AC	1178.13	PASS	AB=0.863;AC=11;AF=0.196;AN=56;BaseQRankSum=-2.157;DP=359;FS=0.583;HRun=9;HaplotypeScore=44.4609;InbreedingCoeff=0.4271;MQ=76.80;MQ0=0;MQRankSum=1.533;QD=10.07;ReadPosRankSum=0.795;VQSLOD=1.4579;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:0.14:7,0,0	0/1:4,2:6:48.36:48,0,86	0/1:15,0:14:20.33:20,0,111	0/0:11,0:10:7.60:0,8,105	0/0:11,0:11:17.98:0,18,156	0/0:9,0:10:23.03:0,23,188	0/0:19,0:19:47.94:0,48,406	0/0:14,0:14:29.93:0,30,251	0/0:9,0:9:26.99:0,27,234	1/1:5,8:13:1.02:238,1,0	0/1:3,3:6:16.92:57,0,17	0/0:10,0:10:23.98:0,24,208	0/0:11,0:11:29.98:0,30,256	0/0:16,0:16:41.99:0,42,362	0/0:10,0:10:26.98:0,27,234	0/0:6,0:6:18:0,18,156	1/1:6,28:35:34.97:819,35,0	0/0:2,0:21:34.36:0,34,104	0/0:12,0:12:29.98:0,30,257	0/0:6,0:6:15:0,15,130	0/0:10,0:10:23.98:0,24,208	0/0:8,0:8:24:0,24,208	0/1:8,1:9:6:6,0,179	0/0:15,1:16:14.81:0,15,357	1/1:1,6:7:12.03:133,12,0	0/0:18,0:18:47.98:0,48,414	0/0:16,1:16:14.81:0,15,357	0/0:7,0:7:14.98:0,15,130
chr10	72429125	.	CA	C	630.77	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=5.048;DP=356;FS=1.543;HRun=1;HaplotypeScore=45.4528;InbreedingCoeff=0.4309;MQ=74.69;MQ0=0;MQRankSum=-2.031;QD=10.17;ReadPosRankSum=1.251;VQSLOD=1.4834;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:53.91:695,54,0	0/0:7,0:7:17.92:0,18,202	0/1:15,0:14:19.01:19,0,290	0/0:9,0:8:16.61:0,17,206	0/0:10,0:10:23.97:0,24,293	0/0:11,0:11:28.47:0,28,348	0/0:16,0:16:48.13:0,48,639	0/0:13,0:13:33.04:0,33,423	0/0:11,0:11:33.08:0,33,424	0/0:13,0:13:38.42:0,38,277	0/0:4,0:4:10.50:0,11,88	0/0:8,0:8:24.08:0,24,334	0/0:12,0:12:35.95:0,36,440	0/0:15,0:15:42.14:0,42,583	0/0:11,0:11:30.08:0,30,399	0/0:6,0:6:18.06:0,18,251	0/0:33,0:33:90.82:0,91,599	0/1:21,0:21:23.60:32,0,24	0/0:15,0:15:42.11:0,42,528	0/0:9,0:9:27.04:0,27,308	0/0:8,0:8:24.08:0,24,333	0/0:10,0:10:30.07:0,30,373	0/0:10,0:10:29.92:0,30,372	0/0:16,0:16:48.07:0,48,610	0/0:7,0:7:11.75:0,12,71	0/0:18,0:18:51.14:0,51,692	0/0:17,0:16:48.09:0,48,639	0/0:5,0:5:15.05:0,15,206
chr10	72429456	.	AAGACAGACAGAC	A	8059.54	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=13.001;DP=623;FS=0.459;HRun=0;HaplotypeScore=209.1359;InbreedingCoeff=0.9837;MQ=68.46;MQ0=5;MQRankSum=-11.941;QD=38.75;ReadPosRankSum=1.012;VQSLOD=4.5009;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,17:38:33.11:1083,33,0	0/0:13,0:13:24.08:0,24,1378	0/0:33,0:27:21.02:0,21,744	0/0:25,0:22:42.14:0,42,1510	0/0:18,0:18:27.09:0,27,1427	0/0:21,0:21:45.13:0,45,2047	0/0:30,0:30:54.17:0,54,2448	0/0:33,0:33:48.15:0,48,2121	0/0:27,0:27:66.20:0,66,3034	1/1:10,11:21:33.11:1082,33,0	1/1:7,7:14:24.08:774,24,0	1/1:6,13:19:33.11:1145,33,0	1/1:5,9:14:20.93:728,21,0	0/0:24,0:23:54.19:0,54,3117	0/0:22,0:22:57.17:0,57,2976	0/0:32,0:33:72.23:0,72,3873	1/1:12,10:22:18.06:518,18,0	1/1:7,8:15:18.06:625,18,0	0/0:15,0:15:18.05:0,18,804	0/0:14,0:14:39.13:0,39,2211	0/0:27,0:27:57.16:0,57,2661	1/1:5,7:12:21.03:541,21,0	1/1:2,4:6:12.04:416,12,0	1/1:20,10:30:11.08:317,11,0	1/1:4,13:17:24.08:832,24,0	0/0:30,0:30:57.19:0,57,3115	0/0:36,0:37:87.28:0,87,4369	0/0:13,0:13:36.12:0,36,2073
chr10	72431142	.	G	GA	3963.18	PASS	AB=0.736;AC=19;AF=0.339;AN=56;BaseQRankSum=-9.310;DP=590;FS=0.763;HRun=10;HaplotypeScore=65.9338;InbreedingCoeff=0.7254;MQ=74.71;MQ0=1;MQRankSum=1.340;QD=17.77;ReadPosRankSum=2.614;VQSLOD=4.2765;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:33:57.10:0,57,647	0/0:3,0:3:2.99:0,3,25	0/1:23,0:19:2.37:2,0,120	0/0:13,0:10:7.19:0,7,49	0/0:23,0:23:47.07:0,47,366	0/0:24,0:24:68.88:0,69,561	0/0:17,1:19:17.99:0,18,343	0/0:33,0:33:83.83:0,84,680	0/0:19,0:19:53.94:0,54,443	1/1:3,22:26:62.96:641,63,0	1/1:4,16:20:19.33:411,19,0	1/1:0,13:13:33.08:352,33,0	1/1:3,18:22:42.03:447,42,0	0/0:21,0:24:54.98:0,55,430	0/0:22,0:22:53.88:0,54,438	0/0:14,0:16:31.99:0,32,252	1/1:7,24:32:41.37:629,41,0	0/1:5,8:14:40.99:205,0,41	0/0:29,0:32:74.33:0,74,559	0/0:28,0:28:62.13:0,62,485	0/0:22,0:24:48.88:0,49,365	1/1:6,21:28:38.22:548,38,0	1/1:5,14:19:5.52:251,6,0	1/1:3,14:17:17.46:391,17,0	0/1:3,6:9:12.61:84,0,13	0/0:22,0:23:55.23:0,55,419	0/0:27,0:27:65.81:0,66,528	0/0:4,0:4:8.98:0,9,74
chr10	72431818	.	AC	A	1695.07	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=10.984;DP=701;FS=8.811;HRun=2;HaplotypeScore=67.5784;InbreedingCoeff=0.9702;MQ=75.03;MQ0=0;MQRankSum=-4.075;QD=31.98;ReadPosRankSum=2.273;VQSLOD=3.2036;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,53:53:99:1790,138,0	0/0:16,0:16:44.96:0,45,674	0/0:13,0:13:36.11:0,36,506	0/0:18,0:18:53.91:0,54,690	0/0:24,0:24:72.24:0,72,1071	0/0:24,0:24:72.23:0,72,1057	0/0:22,0:22:63.16:0,63,897	0/0:26,0:26:72.23:0,72,1058	0/0:22,0:22:63.21:0,63,942	0/0:24,0:24:72.24:0,72,1076	0/0:22,0:22:63.21:0,63,925	0/0:35,0:35:99:0,105,1512	0/0:22,0:22:63.18:0,63,886	0/0:24,0:24:72.24:0,72,1077	0/0:32,0:32:96.33:0,96,1437	0/0:28,0:27:81.24:0,81,1157	0/0:46,0:46:99:0,135,1959	0/0:18,0:18:54.18:0,54,809	0/0:24,0:23:72.23:0,72,1040	0/0:23,0:23:69.23:0,69,1034	0/0:46,0:46:99:0,138,2020	0/0:15,0:15:42.13:0,42,611	0/0:26,0:26:78.26:0,78,1167	0/0:21,0:21:63.20:0,63,920	0/0:17,0:17:51.17:0,51,763	0/0:32,1:33:57.38:0,57,1337	0/0:23,0:23:66.22:0,66,988	0/0:4,0:4:12.04:0,12,178
chr10	72433550	.	GA	G	503.79	PASS	AB=0.683;AC=15;AF=0.288;AN=52;BaseQRankSum=3.263;DP=427;FS=0.998;HRun=2;HaplotypeScore=53.9448;InbreedingCoeff=0.6823;MQ=38.41;MQ0=45;MQRankSum=-4.020;QD=7.00;ReadPosRankSum=-0.057;VQSLOD=0.6595;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,18:15:0.86:0,1,2	./.	0/0:82,0:14:19.38:0,19,310	0/0:97,2:19:14.98:0,15,280	0/0:9,0:8:3.01:0,3,40	0/0:12,1:11:16.12:0,16,163	0/0:17,0:17:32.86:0,33,316	0/0:14,0:14:33.10:0,33,423	0/0:10,0:9:15.89:0,16,182	1/1:7,0:7:11.97:138,12,0	0/1:0,10:7:0.24:0,0,0	1/1:2,4:3:6.02:73,6,0	0/1:3,2:3:0.01:0,0,8	0/0:7,0:7:15.05:0,15,197	0/0:9,0:9:15.94:0,16,201	0/0:5,0:4:9.03:0,9,119	1/1:10,4:11:18.06:227,18,0	1/1:1,8:8:12.03:141,12,0	0/0:8,0:8:20.10:0,20,257	0/0:8,0:7:21.07:0,21,279	0/0:17,0:14:29.90:0,30,338	1/1:1,6:7:3.01:38,3,0	1/1:0,4:4:3.01:38,3,0	0/1:8,2:9:0.02:0,0,0	./.	0/0:19,0:17:50.65:0,51,646	0/0:3,0:1:3.01:0,3,40	0/0:8,0:7:18.06:0,18,238
chr10	72433551	.	A	AG	526.52	PASS	AB=1.000;AC=15;AF=0.288;AN=52;BaseQRankSum=2.942;DP=429;FS=2.280;HRun=1;HaplotypeScore=56.5167;InbreedingCoeff=0.6837;MQ=38.43;MQ0=43;MQRankSum=-4.096;QD=7.98;ReadPosRankSum=-0.101;VQSLOD=0.6633;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,3:15:0.86:0,1,2	./.	0/0:83,0:14:25.85:0,26,338	0/0:100,0:19:21.43:0,21,280	0/0:9,0:8:3.01:0,3,40	0/0:13,0:11:14.39:0,14,146	0/0:17,0:17:32.85:0,33,317	0/0:14,0:14:33.10:0,33,424	0/0:10,0:9:15.50:0,16,182	1/1:0,7:7:12.04:160,12,0	0/1:10,0:7:0:0,0,0	1/1:6,0:3:6.02:73,6,0	0/0:5,0:3:0.03:0,0,12	0/0:7,0:7:15.05:0,15,198	0/0:9,0:9:15.94:0,16,202	0/0:5,0:4:9.03:0,9,120	1/1:5,9:11:18.06:227,18,0	1/1:9,0:8:12.03:141,12,0	0/0:9,0:9:20.98:0,21,260	0/0:8,0:7:21.07:0,21,280	0/0:16,1:14:29.60:0,30,339	1/1:7,0:7:3.01:38,3,0	1/1:4,0:4:3.01:38,3,0	1/1:7,2:9:0.47:1,0,0	./.	0/0:19,0:17:50.65:0,51,646	0/0:2,0:1:3.01:0,3,40	0/0:8,0:7:18.06:0,18,239
chr10	72433577	.	GGA	G	610.88	PASS	AB=0.786;AC=23;AF=0.426;AN=54;BaseQRankSum=0.992;DP=397;FS=3.267;HRun=0;HaplotypeScore=57.5409;InbreedingCoeff=-0.0301;MQ=51.55;MQ0=21;MQRankSum=-4.069;QD=3.51;ReadPosRankSum=-2.720;VQSLOD=1.0214;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,3:19:19.02:19,0,28	1/1:0,1:1:3:28,3,0	0/0:63,0:16:28.86:0,29,296	0/0:84,1:22:19.74:0,20,330	0/0:6,3:9:6.02:0,6,96	0/1:7,3:10:4.85:5,0,93	0/1:6,5:10:27.60:28,0,120	0/1:20,4:24:36.91:37,0,495	0/0:6,3:9:14.92:0,15,179	1/1:7,3:10:7.18:31,7,0	0/0:7,2:6:0:0,0,0	1/1:2,6:8:5.59:64,6,0	1/1:0,3:3:6.64:45,7,0	0/1:4,2:6:17.83:18,0,131	0/1:7,4:11:42.39:42,0,124	0/1:1,3:4:39.60:43,0,40	1/1:4,9:10:8.98:100,9,0	0/0:5,0:4:7.89:0,8,57	0/1:16,0:14:99:120,0,246	0/1:9,2:11:35.84:36,0,84	0/0:10,2:12:12.02:0,12,184	0/0:4,6:10:0.39:0,0,1	1/1:1,3:4:3.01:36,3,0	0/0:7,3:7:0:0,0,0	0/0:3,2:5:1.25:0,1,3	0/1:12,2:14:82.13:82,0,287	0/1:1,1:2:31.37:31,0,42	./.
chr10	72433579	.	A	AGAG	943.56	PASS	AB=0.969;AC=31;AF=0.574;AN=54;BaseQRankSum=1.475;DP=379;FS=13.384;HRun=0;HaplotypeScore=71.5255;InbreedingCoeff=-0.1278;MQ=52.47;MQ0=19;MQRankSum=-4.628;QD=4.41;ReadPosRankSum=-2.022;VQSLOD=0.4387;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:20:25.84:75,0,26	1/1:1,0:1:2.99:23,3,0	0/0:57,0:13:29.55:0,30,290	0/0:79,0:22:22.32:0,22,337	0/0:9,0:9:6.02:0,6,96	0/1:9,0:9:5.26:5,0,88	0/1:11,0:10:27.01:27,0,120	0/1:22,0:22:34.67:35,0,480	0/1:9,0:9:5.57:6,0,116	1/1:9,0:9:12.22:58,12,0	0/1:7,0:6:0:0,0,0	1/1:8,0:8:6.48:68,6,0	1/1:3,0:3:6.64:45,7,0	0/1:6,0:6:20.50:21,0,127	0/1:9,0:11:58.57:59,0,79	0/1:4,0:4:39.30:48,0,39	1/1:12,0:9:8.97:100,9,0	0/1:5,0:4:8.03:18,0,8	0/1:12,4:14:99:256,0,192	0/1:10,0:11:57.67:58,0,84	0/0:13,0:12:11.55:0,12,95	1/1:10,0:10:0.47:1,0,0	1/1:4,0:4:3.01:36,3,0	1/1:9,1:7:0.47:1,0,0	0/1:5,0:5:0:0,0,0	0/1:13,0:13:99:130,0,244	0/1:2,0:2:26.12:26,0,42	./.
chr10	72436444	.	TGAGAGA	T	535.31	PASS	AB=0.995;AC=18;AF=0.375;AN=48;BaseQRankSum=2.186;DP=614;FS=28.436;HRun=0;HaplotypeScore=135.2007;InbreedingCoeff=0.0812;MQ=42.69;MQ0=60;MQRankSum=-2.186;QD=1.67;ReadPosRankSum=-0.169;VQSLOD=0.6318;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:16:2.04:0,2,6	0/0:7,0:7:8.60:0,9,98	./.	./.	./.	0/1:24,0:23:8.01:8,0,20	0/1:31,0:26:0:0,0,0	0/0:27,0:21:10.81:0,11,57	0/0:25,0:23:7.33:0,7,52	1/1:26,0:24:0.39:124,0,0	0/0:15,0:15:0.23:0,0,0	0/1:26,0:19:8.99:9,0,15	0/0:16,0:12:4.76:0,5,86	1/1:28,0:24:2.04:6,2,0	0/1:21,0:20:14.17:14,0,16	0/0:20,14:33:2.52:0,3,23	1/1:16,0:12:3.21:88,3,0	1/1:21,0:16:2.22:7,2,0	0/1:23,0:15:10.91:119,0,11	0/0:17,0:16:1.55:0,2,4	1/1:29,0:25:8.50:117,9,0	./.	0/0:25,0:19:2.69:0,3,13	0/0:23,0:18:0.37:0,0,0	0/1:18,0:14:0.10:0,0,1	0/1:36,0:32:25.24:39,0,25	0/1:20,0:18:60.95:125,0,61	0/0:15,0:10:2.99:0,3,24
chr10	72436491	.	GAGAGAGAGAC	G	587.26	PASS	AB=0.994;AC=18;AF=0.321;AN=56;BaseQRankSum=4.671;DP=665;FS=2.786;HRun=0;HaplotypeScore=159.8770;InbreedingCoeff=-0.0591;MQ=39.04;MQ0=83;MQRankSum=-4.792;QD=1.71;ReadPosRankSum=-0.081;VQSLOD=2.8425;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:10:2.76:0,3,8	0/0:10,0:10:18.33:0,18,245	0/0:5,0:2:3.41:0,3,19	0/0:16,0:3:8.78:0,9,52	0/0:32,0:31:17.25:0,17,267	0/1:23,0:20:5.93:6,0,72	0/0:27,0:20:17.20:0,17,220	0/1:37,0:28:29.07:29,0,291	0/0:31,0:27:15.78:0,16,255	0/1:24,0:22:99:140,0,135	1/1:11,0:9:1.59:6,2,0	0/1:32,1:22:38.78:39,0,67	0/1:16,0:12:21.93:22,0,177	0/0:27,0:23:26.84:0,27,363	0/0:30,0:26:43.45:0,43,324	0/0:44,1:43:40.27:0,40,357	1/1:19,0:9:1.07:100,1,0	0/1:13,0:8:9.30:9,0,16	0/1:25,1:17:99:150,0,139	0/0:34,0:33:1.88:0,2,241	0/1:44,0:36:84.86:85,0,243	1/1:10,1:10:1.82:5,2,0	0/0:9,0:6:2.83:0,3,56	0/1:28,0:20:0:0,0,0	0/1:8,0:8:0.17:0,0,0	0/0:38,0:32:27.60:0,28,423	0/1:32,0:30:99:131,0,235	0/1:19,0:9:3.49:3,0,56
chr10	72436497	.	GAGAC	G	716.15	PASS	AB=0.988;AC=23;AF=0.411;AN=56;BaseQRankSum=5.691;DP=661;FS=6.768;HRun=0;HaplotypeScore=115.7057;InbreedingCoeff=-0.2422;MQ=39.63;MQ0=82;MQRankSum=-2.956;QD=1.46;ReadPosRankSum=0.266;VQSLOD=1.5466;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:11:0.79:0,1,4	0/0:11,0:11:16.73:0,17,113	0/0:10,0:2:3.41:0,3,19	0/0:29,0:3:8.78:0,9,52	0/0:34,0:33:11.18:0,11,254	0/1:24,0:21:53.74:54,0,80	0/0:24,0:18:17.06:0,17,220	0/1:32,0:26:23.76:24,0,335	0/1:35,0:31:61.57:62,0,135	0/1:22,0:20:48.84:124,0,49	1/1:10,0:8:0.47:1,0,0	1/1:30,1:20:0.14:97,0,0	0/1:16,0:12:19.07:27,0,19	0/1:26,0:22:6.09:6,0,231	0/1:31,0:27:36.07:36,0,211	0/1:48,0:46:8.94:9,0,263	1/1:19,0:9:2.59:95,3,0	0/1:11,0:6:8.76:9,0,16	0/1:25,0:15:57.64:58,0,138	0/0:35,0:34:8.12:0,8,255	0/1:43,0:36:78.33:78,0,202	0/1:8,0:8:0:0,0,0	0/0:8,0:5:2.64:0,3,12	0/1:26,0:18:0:0,0,0	0/1:4,0:4:0.13:0,0,0	0/1:27,7:29:74.51:75,0,317	0/1:26,1:25:96.33:96,0,116	0/1:20,0:11:0.82:1,0,65
chr10	72436528	.	T	TGAGA	252.20	PASS	AB=0.985;AC=12;AF=0.222;AN=54;BaseQRankSum=6.267;DP=669;FS=0.947;HRun=0;HaplotypeScore=137.4763;InbreedingCoeff=0.2927;MQ=47.98;MQ0=57;MQRankSum=-3.242;QD=1.61;ReadPosRankSum=-3.217;VQSLOD=1.7309;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:37,4:36:32.74:79,0,33	0/0:13,0:13:31.62:0,32,491	0/0:29,0:8:15.90:0,16,204	0/0:53,0:10:17.51:0,18,236	0/0:27,0:25:43.69:0,44,1026	0/0:18,0:17:35.09:0,35,607	0/0:27,0:27:63.72:0,64,1039	0/0:35,0:30:77.69:0,78,1089	0/0:32,0:30:56.54:0,57,936	0/1:15,0:14:6.94:7,0,62	./.	0/1:22,0:18:32.96:50,0,33	0/1:17,0:15:43.29:43,0,51	0/0:29,0:27:63.20:0,63,1138	0/0:35,0:33:74.93:0,75,1299	0/0:37,0:35:39.56:0,40,1238	1/1:16,0:9:5.34:44,5,0	0/1:12,0:11:46.81:83,0,47	0/0:23,0:19:53.90:0,54,796	0/0:27,0:26:56.98:0,57,1076	0/0:40,0:37:75.21:0,75,1280	0/0:7,0:7:1.82:0,2,5	1/1:9,0:6:2.91:47,3,0	0/1:24,0:20:0.29:0,0,0	1/1:1,0:1:3.01:39,3,0	0/0:33,0:28:80.94:0,81,1502	0/0:30,0:29:64.11:0,64,1016	0/0:10,0:8:18.06:0,18,298
chr10	72436553	.	G	GAGAC	339.10	PASS	AB=0.777;AC=3;AF=0.054;AN=56;BaseQRankSum=5.109;DP=669;FS=23.977;HRun=0;HaplotypeScore=156.8607;InbreedingCoeff=-0.0723;MQ=57.52;MQ0=26;MQRankSum=-4.543;QD=5.22;ReadPosRankSum=-2.220;VQSLOD=0.7474;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,17:43:99:240,0,220	0/0:14,0:14:39.10:0,39,669	0/0:49,0:12:19.68:0,20,276	0/0:56,0:22:12.36:0,12,404	0/0:20,0:20:54.13:0,54,955	0/0:18,0:18:48.15:0,48,888	0/0:22,0:22:63.08:0,63,1016	0/0:36,0:34:93.25:0,93,1663	0/0:25,0:25:62.21:0,62,1147	0/0:16,0:15:11.38:0,11,429	0/0:10,0:10:5.95:0,6,76	0/0:21,0:21:23.69:0,24,494	0/0:13,0:13:12.11:0,12,219	0/0:31,0:31:84.25:0,84,1517	0/0:32,0:30:78.22:0,78,1414	0/0:31,0:31:84.25:0,84,1549	0/1:7,3:10:99:164,0,114	0/1:9,1:10:34.56:35,0,206	0/0:26,0:25:34.21:0,34,1016	0/0:22,0:22:63.15:0,63,1081	0/0:41,0:38:95.83:0,96,1634	0/0:8,0:8:5.99:0,6,73	0/0:13,0:14:14.99:0,15,249	0/0:20,0:20:8.39:0,8,178	0/0:8,0:8:23.52:0,24,262	0/0:42,0:42:99:0,120,2103	0/0:22,0:22:63.04:0,63,1116	0/0:7,0:6:17.93:0,18,291
chr10	72436574	.	AGT	A	356.93	PASS	AB=0.978;AC=14;AF=0.250;AN=56;BaseQRankSum=6.108;DP=764;FS=4.796;HRun=0;HaplotypeScore=147.2326;InbreedingCoeff=0.1251;MQ=54.42;MQ0=21;MQRankSum=-2.101;QD=1.29;ReadPosRankSum=1.403;VQSLOD=2.3522;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:42:12.40:12,0,112	0/0:11,0:11:24.66:0,25,302	0/0:63,0:11:5.75:0,6,61	0/0:78,0:32:16.62:0,17,228	0/0:16,0:16:39.02:0,39,498	0/1:22,1:22:27.96:28,0,594	0/0:36,0:36:49.57:0,50,816	0/0:33,0:32:20.38:0,20,413	0/0:26,0:26:40.71:0,41,649	0/1:17,0:16:12.51:95,0,13	0/0:8,3:11:0.52:0,1,4	1/1:18,1:19:7.36:56,7,0	0/1:18,0:17:20.52:57,0,21	0/1:27,1:28:11.26:11,0,686	0/0:29,0:29:53.30:0,53,859	0/0:35,0:35:37.11:0,37,988	0/1:20,1:19:3.92:79,0,4	0/0:16,0:16:2.63:0,3,180	0/0:27,0:24:5.06:0,5,429	0/0:21,0:21:43.80:0,44,669	0/1:46,1:45:13.92:14,0,884	0/0:13,2:15:3.66:0,4,8	1/1:21,1:22:3.39:54,3,0	0/1:26,1:26:13.18:22,0,13	1/1:12,1:13:3.79:80,4,0	0/0:38,0:38:40.63:0,41,930	0/0:27,0:27:24.98:0,25,616	0/0:5,0:5:6.02:0,6,97
chr10	72436623	.	C	CAG	4205.87	PASS	AB=0.706;AC=21;AF=0.375;AN=56;BaseQRankSum=12.527;DP=907;FS=1.268;HRun=0;HaplotypeScore=184.0115;InbreedingCoeff=0.9145;MQ=54.12;MQ0=21;MQRankSum=-3.704;QD=15.58;ReadPosRankSum=0.812;VQSLOD=3.8163;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,3:23:12.01:175,12,0	0/0:13,0:13:24.05:0,24,297	0/0:77,0:17:17.87:0,18,248	0/0:119,0:35:50.08:0,50,416	0/0:19,0:19:45.05:0,45,524	0/0:23,0:23:45.94:0,46,630	0/0:34,0:34:63.06:0,63,835	0/0:45,0:39:79.16:0,79,1056	0/0:21,0:21:42.51:0,43,502	1/1:11,6:16:36.88:432,37,0	0/1:7,5:12:4.74:165,0,5	1/1:16,12:28:29.43:411,29,0	1/1:12,11:21:22.22:334,22,0	0/0:32,0:32:75.14:0,75,868	0/0:38,0:38:76.74:0,77,1205	0/0:38,0:38:87.09:0,87,1038	1/1:13,10:21:16.69:440,17,0	1/1:9,5:14:27.02:366,27,0	0/0:27,0:21:49.34:0,49,549	0/0:27,0:27:57.12:0,57,838	0/0:54,0:53:99:0,126,1538	1/1:26,8:34:22.58:301,23,0	1/1:14,8:22:21.79:302,22,0	1/1:16,38:52:63.04:1050,63,0	1/1:10,10:20:4.79:230,5,0	0/0:37,0:37:82.41:0,82,1025	0/0:21,0:21:54.17:0,54,689	0/0:12,0:12:36.10:0,36,456
chr10	72436644	.	A	AGT	914.72	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=11.679;DP=873;FS=2.885;HRun=0;HaplotypeScore=209.8517;InbreedingCoeff=0.4810;MQ=53.88;MQ0=20;MQRankSum=-4.961;QD=3.43;ReadPosRankSum=-2.676;VQSLOD=2.4869;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:13.22:57,13,0	0/0:12,0:12:30.10:0,30,386	0/0:66,0:17:23.39:0,23,174	0/0:87,0:28:15.85:0,16,171	0/0:19,0:19:56.81:0,57,645	0/0:27,0:27:49.57:0,50,620	0/0:29,0:29:59.43:0,59,556	0/0:47,0:43:99:0,99,1075	0/0:23,0:23:35.24:0,35,471	1/1:16,5:19:36.29:378,36,0	1/1:8,5:14:7.45:77,7,0	0/1:30,0:30:5.11:104,0,5	0/1:24,0:22:54.73:68,0,55	0/0:28,0:28:68.63:0,69,754	0/0:37,0:37:73.74:0,74,932	0/0:40,0:40:99:0,99,1136	1/1:18,1:19:10.15:172,10,0	0/1:11,0:11:8.99:49,0,9	0/0:24,0:16:41.74:0,42,457	0/0:27,0:27:55.66:0,56,744	0/0:63,0:61:99:0,145,1694	0/1:30,0:30:6.17:6,0,59	0/1:28,0:28:14.25:55,0,14	0/1:52,0:50:79.58:80,0,160	1/1:13,6:19:7.69:47,8,0	0/0:36,0:36:82.78:0,83,985	0/0:23,0:23:59.19:0,59,565	0/0:16,0:16:45.03:0,45,522
chr10	72436652	.	TGA	T	291.14	PASS	AB=0.973;AC=12;AF=0.214;AN=56;BaseQRankSum=3.146;DP=868;FS=13.649;HRun=0;HaplotypeScore=214.5984;InbreedingCoeff=-0.0730;MQ=53.22;MQ0=19;MQRankSum=2.025;QD=1.01;ReadPosRankSum=-3.757;VQSLOD=0.5310;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,4:17:14.99:164,15,0	0/0:15,0:15:5.42:0,5,502	0/0:49,0:13:8.86:0,9,84	0/0:80,0:24:7.83:0,8,107	0/0:24,0:24:60.15:0,60,864	0/1:31,1:31:55.12:55,0,566	0/1:28,1:29:48.63:49,0,552	0/0:40,0:37:31.96:0,32,835	0/1:25,0:25:2.86:3,0,561	0/0:24,0:23:45.23:0,45,381	0/0:16,0:16:14.80:0,15,57	0/1:31,1:32:31.82:32,0,164	0/1:28,0:26:16.31:16,0,136	0/0:29,1:30:34.61:0,35,848	0/0:38,0:38:9.48:0,9,863	0/0:40,0:40:81.20:0,81,1221	0/1:15,0:14:2.68:3,0,68	0/1:11,0:11:16.15:16,0,44	0/0:24,0:15:35.77:0,36,489	0/0:25,0:25:1.39:0,1,717	0/0:60,2:62:71.83:0,72,1918	0/1:29,2:31:4.54:5,0,134	0/1:30,0:30:42.94:43,0,111	0/0:51,0:49:45.57:0,46,515	0/0:16,0:16:7.66:0,8,25	0/1:32,5:37:50.48:50,0,1150	0/0:26,0:26:44.53:0,45,578	0/0:16,0:18:29.05:0,29,552
chr10	72436704	.	A	AGT	3961.19	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=14.314;DP=954;FS=3.813;HRun=0;HaplotypeScore=202.0318;InbreedingCoeff=0.9056;MQ=54.01;MQ0=16;MQRankSum=-2.466;QD=12.46;ReadPosRankSum=0.485;VQSLOD=3.5098;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,11:23:20.64:268,21,0	0/0:19,0:19:35.13:0,35,570	0/0:60,0:10:10.43:0,10,109	0/0:95,0:25:15.21:0,15,103	0/0:21,0:20:42.04:0,42,471	0/0:32,1:32:0.23:0,0,593	0/0:34,0:34:81.14:0,81,897	0/0:43,0:43:78.14:0,78,825	0/0:33,0:33:78.13:0,78,867	1/1:33,0:33:46.85:306,47,0	1/1:23,0:23:16.29:61,16,0	1/1:11,33:42:31.94:442,32,0	1/1:18,14:31:41.67:553,42,0	0/0:35,0:35:84.17:0,84,966	0/0:34,0:34:83.19:0,83,877	0/0:39,0:39:90.04:0,90,1005	0/1:19,0:19:2.14:16,0,2	1/1:13,7:20:39.23:430,39,0	0/0:19,0:17:24.04:0,24,262	0/0:24,0:24:63.09:0,63,666	0/0:68,0:66:99:0,138,1529	1/1:21,12:33:32.50:473,33,0	1/1:20,7:27:33.02:445,33,0	1/1:23,20:42:47.63:868,48,0	1/1:19,0:19:21.22:98,21,0	0/0:39,0:39:61.51:0,62,986	0/0:24,0:23:57.02:0,57,619	0/0:15,0:15:27.06:0,27,317
chr10	72436768	.	A	AGT	3599.89	PASS	AB=0.853;AC=22;AF=0.393;AN=56;BaseQRankSum=11.070;DP=903;FS=8.712;HRun=0;HaplotypeScore=149.8835;InbreedingCoeff=0.7892;MQ=48.50;MQ0=20;MQRankSum=-6.142;QD=8.93;ReadPosRankSum=2.142;VQSLOD=2.9902;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,11:28:14.77:183,15,0	0/0:12,0:12:27.03:0,27,291	0/0:50,0:7:2.14:0,2,41	0/1:84,0:10:2.61:3,0,13	0/0:17,0:16:42.09:0,42,472	0/0:24,0:24:66.09:0,66,714	0/0:35,0:35:65.86:0,66,761	0/0:37,0:36:55.61:0,56,576	0/0:31,0:31:74.88:0,75,845	1/1:24,12:36:69.32:925,69,0	1/1:12,4:18:10.41:127,10,0	1/1:33,13:45:28.51:572,29,0	1/1:28,8:36:4.16:381,4,0	0/0:36,0:37:89.87:0,90,988	0/0:37,0:37:72.70:0,73,920	0/0:30,0:30:66.52:0,67,770	1/1:4,18:25:17.89:258,18,0	1/1:8,7:15:32.98:451,33,0	0/0:25,0:20:29.85:0,30,299	0/0:21,0:23:47.74:0,48,509	0/0:63,0:63:99:0,130,1445	1/1:25,10:35:17.07:225,17,0	1/1:11,6:16:2.74:12,3,0	1/1:22,12:33:23.87:343,24,0	0/1:12,10:24:91.13:121,0,91	0/0:37,0:37:90.22:0,90,1031	0/0:25,0:25:65.77:0,66,723	0/0:16,0:15:29.92:0,30,294
chr10	72436803	.	C	CAG	84.28	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=7.319;DP=805;FS=0.000;HRun=0;HaplotypeScore=134.0879;InbreedingCoeff=0.2209;MQ=48.78;MQ0=15;MQRankSum=-4.902;QD=0.49;ReadPosRankSum=-1.600;VQSLOD=2.3072;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,4:19:2.99:24,3,0	0/0:8,0:8:24.02:0,24,267	0/0:49,0:3:3.01:0,3,36	0/0:83,0:9:0.55:0,1,90	0/0:18,0:18:33.04:0,33,374	0/1:20,0:20:17.85:18,0,418	0/0:37,0:37:77.48:0,77,833	0/0:34,0:33:66.15:0,66,748	0/0:32,0:32:77.71:0,78,865	0/1:29,0:26:28.68:36,0,29	0/1:12,0:10:0.01:1,0,0	0/1:35,0:34:36.63:37,0,84	0/1:32,0:32:46.94:48,0,47	0/0:37,0:36:78.07:0,78,886	0/0:35,0:35:75.19:0,75,885	0/0:31,0:31:75.11:0,75,869	0/0:13,0:13:8.68:0,9,62	1/1:7,0:10:5.51:48,6,0	0/0:18,0:16:33.04:0,33,364	0/0:25,0:25:41.13:0,41,568	0/0:59,0:59:99:0,123,1352	0/0:33,0:33:2.64:0,3,20	0/0:22,0:21:2.97:0,3,20	0/0:25,0:25:5.72:0,6,45	0/1:14,0:14:0.01:0,0,0	0/0:36,0:36:32.10:0,32,862	0/0:23,0:23:57.13:0,57,668	0/0:16,0:15:42.08:0,42,489
chr10	72436816	.	A	AGTGTGT	1506.06	PASS	AB=0.909;AC=19;AF=0.339;AN=56;BaseQRankSum=10.466;DP=802;FS=18.427;HRun=0;HaplotypeScore=174.4472;InbreedingCoeff=0.6955;MQ=53.30;MQ0=15;MQRankSum=-6.911;QD=7.38;ReadPosRankSum=-2.829;VQSLOD=1.2197;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:19:2.49:0,2,6	0/0:10,0:10:9.99:0,10,429	0/0:57,0:10:15.01:0,15,232	0/0:97,0:16:0.03:0,0,219	0/0:16,0:16:30.09:0,30,594	0/0:21,0:21:51.17:0,51,1042	0/0:38,0:38:74.77:0,75,1592	0/0:37,0:36:81.26:0,81,1644	0/0:31,0:33:87.28:0,87,1782	1/1:26,0:24:35.79:504,36,0	1/1:10,0:9:2.88:24,3,0	1/1:31,0:31:27:464,27,0	1/1:29,1:30:25.15:353,25,0	0/0:32,0:32:81.24:0,81,1635	0/0:33,0:33:83.31:0,83,1701	0/0:30,0:30:81.25:0,81,1644	0/1:8,0:10:38.75:89,0,39	1/1:11,0:11:14.96:188,15,0	0/0:15,0:13:30.10:0,30,617	0/0:23,0:23:54.19:0,54,1148	0/0:66,0:66:99:0,144,2838	1/1:30,1:31:2.85:18,3,0	1/1:23,0:22:2.43:13,2,0	1/1:17,5:22:0.04:1,0,0	1/1:7,0:8:2.86:30,3,0	0/0:34,0:34:78.73:0,79,1665	0/0:20,0:21:63.20:0,63,1277	0/0:15,0:14:39.13:0,39,851
chr10	72436828	.	T	TGAGAGAGA	2233.41	PASS	AB=0.909;AC=17;AF=0.315;AN=54;BaseQRankSum=8.087;DP=800;FS=16.333;HRun=0;HaplotypeScore=190.9085;InbreedingCoeff=0.7537;MQ=53.20;MQ0=14;MQRankSum=-7.146;QD=12.14;ReadPosRankSum=-3.236;VQSLOD=0.7261;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,5:18:0:0,0,0	0/0:9,0:9:24.08:0,24,506	0/0:66,0:17:26.82:0,27,430	0/0:100,0:25:28.20:0,28,438	0/0:17,0:17:27.09:0,27,584	0/0:20,0:20:57.17:0,57,1275	0/0:37,0:37:86.41:0,86,1988	0/0:37,0:37:72.24:0,72,1719	0/0:33,0:33:84.27:0,84,2012	1/1:21,0:20:26.33:686,26,0	./.	1/1:30,0:29:10.46:304,10,0	1/1:34,0:34:31.01:681,31,0	0/0:32,0:32:81.23:0,81,1829	0/0:34,0:34:81.24:0,81,1938	0/0:29,0:29:72.25:0,72,1725	0/1:9,0:10:25.65:127,0,26	1/1:5,1:9:11.85:456,12,0	0/0:16,0:13:27.01:0,27,465	0/0:21,0:21:48.15:0,48,1089	0/0:67,0:66:99:0,144,3328	1/1:31,0:31:5.03:30,5,0	1/1:20,0:20:1.71:5,2,0	1/1:21,0:21:2.21:95,2,0	1/1:6,0:7:2.78:24,3,0	0/0:32,0:32:78.21:0,78,1865	0/0:21,0:21:51.09:0,51,1142	0/0:15,0:14:39.13:0,39,942
chr10	72436841	.	G	GAGAGAGAGAGAC	4662.05	PASS	AB=0.900;AC=16;AF=0.286;AN=56;BaseQRankSum=6.926;DP=805;FS=1.566;HRun=0;HaplotypeScore=237.0035;InbreedingCoeff=0.7112;MQ=56.51;MQ0=16;MQRankSum=-4.751;QD=25.90;ReadPosRankSum=-3.758;VQSLOD=3.2157;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:5.77:0,6,39	0/0:9,0:9:27.08:0,27,743	0/0:65,0:23:50.11:0,50,889	0/0:93,0:29:27.85:0,28,758	0/0:14,0:14:36.07:0,36,907	0/0:22,0:22:63.14:0,63,1862	0/0:39,0:39:99:0,101,2924	0/0:37,0:37:99:0,102,2676	0/0:31,0:31:90.24:0,90,2935	1/1:1,9:26:57.36:1839,57,0	1/1:9,0:11:5.99:48,6,0	1/1:22,3:28:4.58:512,5,0	1/1:21,3:28:42.32:1183,42,0	0/0:33,0:33:96.22:0,96,2808	0/0:33,0:33:96.24:0,96,2932	0/0:28,0:28:84.22:0,84,2558	0/1:9,1:12:35.18:343,0,35	0/1:9,0:9:46.20:307,0,46	0/0:23,0:18:44.85:0,45,802	0/0:20,0:20:51.15:0,51,1569	0/0:68,0:68:99:0,163,4984	1/1:29,5:34:20.95:190,21,0	0/0:7,12:20:0:0,0,0	1/1:17,3:22:5.56:141,6,0	1/1:9,0:9:8.79:100,9,0	0/0:34,0:34:65.30:0,65,2782	0/0:21,0:21:60.07:0,60,1709	0/0:16,0:15:39.13:0,39,1347
chr10	72437534	.	G	GTT	1424.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.906;DP=538;FS=3.588;HRun=3;HaplotypeScore=72.0994;InbreedingCoeff=0.9935;MQ=80.09;MQ0=2;MQRankSum=-2.344;QD=45.94;ReadPosRankSum=1.242;VQSLOD=3.0873;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:31:84.29:1519,84,0	0/0:10,0:10:30.10:0,30,417	0/0:9,0:9:23.06:0,23,299	0/0:19,0:19:48.12:0,48,631	0/0:31,0:31:84.25:0,84,1141	0/0:21,0:22:63.21:0,63,882	0/0:14,0:14:39.13:0,39,545	0/0:25,0:25:60.20:0,60,839	0/0:12,0:12:36.08:0,36,482	0/0:22,0:22:63.20:0,63,867	0/0:21,0:21:54.16:0,54,751	0/0:15,0:15:39.12:0,39,528	0/0:10,0:10:24.08:0,24,335	0/0:22,0:22:66.22:0,66,922	0/0:18,0:18:54.18:0,54,755	0/0:24,0:24:72.24:0,72,1007	0/0:23,0:21:48.16:0,48,667	0/0:14,0:14:36.09:0,36,484	0/0:24,0:24:63.20:0,63,863	0/0:26,0:26:75.21:0,75,1029	0/0:20,0:20:57.15:0,57,761	0/0:17,0:17:48.16:0,48,683	0/0:20,0:20:54.18:0,54,755	0/0:15,0:15:45.11:0,45,607	0/0:19,0:19:51.16:0,51,698	0/0:24,0:24:66.22:0,66,923	0/0:20,0:20:57.17:0,57,780	0/0:11,0:11:27.09:0,27,378
chr10	72437594	.	GCA	G	3212.20	PASS	AB=0.964;AC=22;AF=0.393;AN=56;BaseQRankSum=10.518;DP=620;FS=3.047;HRun=0;HaplotypeScore=104.8851;InbreedingCoeff=0.9002;MQ=68.08;MQ0=5;MQRankSum=-0.537;QD=13.11;ReadPosRankSum=3.386;VQSLOD=3.3693;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:61.47:418,61,0	0/0:9,0:9:24.07:0,24,362	0/0:39,0:24:40.49:0,40,489	0/0:32,0:17:25.90:0,26,315	0/0:34,0:34:75.84:0,76,1345	0/0:24,0:24:59.94:0,60,834	0/0:18,0:17:45.11:0,45,660	0/0:19,0:19:33.08:0,33,445	0/1:12,1:13:3.36:3,0,382	1/1:15,7:22:22.15:350,22,0	1/1:10,9:19:48.64:544,49,0	1/1:9,4:13:28:251,28,0	1/1:18,6:24:34.51:308,35,0	0/0:14,0:14:38.88:0,39,521	0/0:24,0:24:51.15:0,51,776	0/0:16,0:16:42.11:0,42,618	1/1:29,8:35:65.88:484,66,0	0/1:13,0:13:1.68:2,0,147	0/0:19,0:19:38.91:0,39,447	0/0:28,1:29:31.32:0,31,801	0/0:16,0:16:42.10:0,42,604	1/1:18,3:21:41.04:356,41,0	1/1:20,6:26:44.22:348,44,0	1/1:7,1:8:16.91:133,17,0	1/1:23,1:24:36.36:230,36,0	0/0:32,0:32:59.58:0,60,1047	0/0:32,1:33:46.43:0,46,1249	0/0:16,0:16:42.09:0,42,624
chr10	72437606	.	AC	A	3808.99	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=13.676;DP=651;FS=10.449;HRun=1;HaplotypeScore=99.6355;InbreedingCoeff=0.9214;MQ=60.86;MQ0=16;MQRankSum=-2.238;QD=15.67;ReadPosRankSum=4.028;VQSLOD=2.8917;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,19:32:58.35:808,58,0	0/0:10,0:10:30.04:0,30,354	0/0:48,0:19:40.68:0,41,474	0/0:38,0:19:36.43:0,36,355	0/0:38,0:36:99:0,102,1286	0/0:26,0:26:66.46:0,66,758	0/0:18,0:17:51.08:0,51,609	0/0:22,0:22:59.28:0,59,611	0/0:13,0:13:23.76:0,24,343	1/1:19,1:20:43.15:276,43,0	1/1:19,0:19:49.55:279,50,0	1/1:13,0:13:28.94:181,29,0	1/1:22,1:23:54.92:294,55,0	0/0:16,0:16:37.12:0,37,431	0/0:21,0:21:57.11:0,57,696	0/0:18,0:18:22.74:0,23,569	1/1:36,1:35:74.74:462,75,0	0/1:19,0:19:30.22:41,0,30	0/0:18,0:16:35.35:0,35,414	0/0:28,0:28:67.55:0,68,810	0/0:15,0:14:42.08:0,42,506	1/1:21,0:20:51.32:288,51,0	1/1:25,0:24:55.33:318,55,0	1/1:8,1:9:17.48:142,17,0	1/1:13,11:24:70.94:720,71,0	0/0:28,1:29:25.36:0,25,900	0/0:32,0:32:56.58:0,57,1082	0/0:18,0:17:51.05:0,51,591
chr10	72437607	.	C	CA	653.50	PASS	AB=0.975;AC=16;AF=0.286;AN=56;BaseQRankSum=12.893;DP=656;FS=1.825;HRun=10;HaplotypeScore=114.1475;InbreedingCoeff=-0.0274;MQ=59.74;MQ0=16;MQRankSum=-2.631;QD=2.22;ReadPosRankSum=3.648;VQSLOD=-0.6131;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:31:17.73:148,18,0	0/0:10,0:10:26.92:0,27,214	0/0:44,0:16:4.49:0,4,125	0/0:36,0:18:16.96:0,17,141	0/0:38,0:37:78.36:0,78,719	0/0:23,1:26:37.94:0,38,485	0/0:19,0:18:41.93:0,42,342	0/0:22,0:22:44.24:0,44,365	0/1:12,1:13:5.44:5,0,155	0/1:19,0:19:40.79:41,0,64	0/1:19,0:19:10.97:11,0,113	0/1:14,0:14:20.60:21,0,37	0/1:23,0:23:29.54:98,0,30	0/0:17,0:17:26.26:0,26,220	0/0:22,0:22:49.21:0,49,383	0/1:17,2:19:15.35:15,0,290	0/1:37,0:35:34.55:107,0,35	0/1:19,0:19:43.16:43,0,119	0/1:16,3:18:6.81:7,0,150	0/0:27,1:28:21.76:0,22,375	0/0:15,0:14:29.95:0,30,246	0/1:21,0:20:60.11:60,0,60	0/1:26,0:25:26.78:98,0,27	0/1:9,0:9:7.19:7,0,12	1/1:24,0:24:25.94:158,26,0	0/0:30,0:30:33.77:0,34,481	0/0:33,0:33:59.46:0,59,647	0/0:18,0:17:41.94:0,42,345
chr10	72437612	.	A	AAAAC	5562.44	PASS	AB=0.743;AC=17;AF=0.304;AN=56;BaseQRankSum=9.492;DP=644;FS=13.860;HRun=0;HaplotypeScore=124.1912;InbreedingCoeff=0.7514;MQ=58.24;MQ0=17;MQRankSum=-0.137;QD=23.87;ReadPosRankSum=5.265;VQSLOD=3.8059;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:30:38.13:352,0,38	0/0:10,0:10:27.07:0,27,415	0/0:42,0:13:25:0,25,288	0/0:31,0:12:25.81:0,26,324	0/0:40,0:38:74.04:0,74,1489	0/0:25,0:25:71.62:0,72,1123	0/0:20,0:19:51.07:0,51,759	0/0:25,0:24:61.70:0,62,832	0/0:13,0:13:32.98:0,33,439	1/1:10,9:20:39.70:662,40,0	1/1:9,12:21:53.75:597,54,0	1/1:6,7:13:22.41:321,22,0	1/1:8,12:24:17.88:845,18,0	0/0:15,0:15:41.84:0,42,542	0/0:22,0:22:59.20:0,59,867	0/0:20,0:20:53.92:0,54,777	1/1:16,21:40:36.41:912,36,0	0/0:20,0:20:34.62:0,35,475	0/0:16,0:14:35.42:0,35,420	0/0:21,0:21:60.06:0,60,879	0/0:13,0:12:33.10:0,33,511	1/1:6,16:21:28.39:749,28,0	1/1:10,15:25:35.12:833,35,0	0/1:5,5:11:0.29:85,0,0	0/1:16,0:23:99:207,0,138	0/0:26,1:27:0.31:0,0,1056	0/0:33,0:33:94.44:0,94,1481	0/0:18,0:17:45.14:0,45,739
chr10	72439068	.	C	CGT	2511.70	PASS	AB=0.780;AC=9;AF=0.161;AN=56;BaseQRankSum=4.645;DP=927;FS=13.488;HRun=0;HaplotypeScore=162.4854;InbreedingCoeff=0.8520;MQ=63.35;MQ0=6;MQRankSum=-0.710;QD=16.97;ReadPosRankSum=3.383;VQSLOD=3.2590;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:24.07:0,24,296	0/0:15,0:15:36.11:0,36,446	0/0:31,0:23:18.49:0,18,210	0/0:42,0:34:41.26:0,41,421	0/0:15,0:16:40.20:0,40,434	0/0:22,0:22:50.93:0,51,590	0/0:41,0:41:63.19:0,63,765	0/0:35,0:34:46.60:0,47,761	0/0:29,1:30:11.88:0,12,648	0/0:41,0:41:80.52:0,81,977	0/0:19,0:19:14.90:0,15,172	1/1:10,23:32:23.76:798,24,0	1/1:14,14:29:21.13:463,21,0	0/0:33,0:33:66.20:0,66,802	0/0:42,0:43:95.96:0,96,1331	0/0:42,0:42:99:0,111,1337	0/0:28,0:28:38.59:0,39,534	0/0:20,0:20:21.07:0,21,259	0/0:35,0:33:59.86:0,60,731	0/0:24,0:24:67.09:0,67,804	0/0:102,0:100:99:0,204,2408	1/1:15,15:31:7.43:648,7,0	1/1:8,15:23:24.08:394,24,0	0/1:23,9:31:7.14:368,0,7	0/0:25,0:25:33.04:0,33,407	0/0:54,0:54:99:0,128,1484	0/0:30,1:31:29.07:0,29,864	0/0:14,0:14:26.30:0,26,302
chr10	72439090	.	TGTGTGTGC	T	4374.71	PASS	AB=0.659;AC=21;AF=0.404;AN=52;BaseQRankSum=10.681;DP=924;FS=9.138;HRun=0;HaplotypeScore=255.1803;InbreedingCoeff=0.8989;MQ=54.28;MQ0=15;MQRankSum=-0.808;QD=13.18;ReadPosRankSum=0.008;VQSLOD=2.1405;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:40,1:39:4.30:15,4,0	0/0:18,0:18:33.45:0,33,565	./.	./.	0/0:18,0:18:20.67:0,21,469	0/0:25,0:25:54.04:0,54,1386	0/0:34,0:35:63.08:0,63,1150	0/0:28,0:25:32.92:0,33,430	0/0:33,0:33:72.47:0,72,1507	1/1:21,26:45:65.02:843,65,0	1/1:6,14:20:3.31:50,3,0	1/1:37,0:36:60.09:826,60,0	1/1:20,0:20:36.03:485,36,0	0/0:35,0:35:71.66:0,72,1448	0/0:53,0:53:99:0,108,2548	0/0:48,0:48:77.86:0,78,1920	1/1:27,2:29:48.39:746,48,0	1/1:24,0:24:6:87,6,0	0/0:37,0:31:39.84:0,40,639	0/0:29,0:29:53.28:0,53,1283	0/0:118,0:113:99:0,231,5166	1/1:29,0:29:38.16:472,38,0	1/1:20,0:20:29.50:377,30,0	1/1:38,0:37:26.50:474,27,0	0/1:13,14:27:0.09:0,0,0	0/0:54,0:53:10.47:0,10,2143	0/0:29,0:29:51.07:0,51,990	0/0:10,0:10:14.68:0,15,350
chr10	72439094	.	TGTGC	T	1206.81	PASS	AB=0.943;AC=9;AF=0.167;AN=54;BaseQRankSum=12.709;DP=920;FS=1.400;HRun=0;HaplotypeScore=207.4389;InbreedingCoeff=0.0251;MQ=53.99;MQ0=17;MQRankSum=-2.766;QD=4.50;ReadPosRankSum=0.218;VQSLOD=2.8045;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:41,1:40:8.62:9,0,197	0/0:18,0:18:47.12:0,47,841	./.	0/0:14,0:6:7.74:0,8,58	0/0:16,0:16:32.65:0,33,596	0/0:27,0:27:57.14:0,57,1288	0/0:35,0:35:93.22:0,93,1823	0/0:29,0:26:65.99:0,66,979	0/0:35,0:35:86.84:0,87,1531	0/1:47,0:45:99:137,0,563	0/0:20,0:20:8.44:0,8,153	0/1:37,2:38:41.59:323,0,42	0/1:19,1:20:16.30:203,0,16	0/0:33,0:33:87.14:0,87,1751	0/0:52,0:52:99:0,130,2990	0/0:45,0:45:99:0,120,2562	0/1:28,0:28:99:138,0,235	0/0:25,0:25:4.29:0,4,177	0/0:33,0:28:55.11:0,55,938	0/0:31,0:31:56.42:0,56,1332	0/0:114,0:109:99:0,268,5624	0/1:23,8:31:62.66:159,0,63	1/1:21,2:23:8.72:196,9,0	0/1:35,3:37:22.76:182,0,23	0/0:28,0:28:14.58:0,15,229	0/0:56,0:55:99:0,124,2779	0/0:27,0:27:69.37:0,69,1273	0/0:10,0:10:23.68:0,24,457
chr10	72439108	.	TGTGTGC	T	1840.49	PASS	AB=1.000;AC=16;AF=0.308;AN=52;BaseQRankSum=13.597;DP=918;FS=6.236;HRun=0;HaplotypeScore=256.1488;InbreedingCoeff=0.2611;MQ=53.46;MQ0=15;MQRankSum=1.260;QD=5.11;ReadPosRankSum=0.248;VQSLOD=1.8166;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,37:45:7.63:79,8,0	0/0:15,0:15:33.43:0,33,590	./.	./.	0/0:19,0:19:38.63:0,39,702	0/0:25,0:25:57.03:0,57,1443	0/0:38,0:38:51.56:0,52,1778	0/0:26,0:22:65.80:0,66,852	0/0:33,0:33:87.52:0,88,1852	0/1:48,0:45:99:459,0,140	1/1:23,0:23:3:14,3,0	0/1:36,0:35:54.52:304,0,55	0/1:25,0:25:99:155,0,142	0/0:35,0:35:87.09:0,87,1754	0/0:47,0:46:99:0,107,2489	0/0:45,0:45:99:0,102,2190	1/1:26,0:26:42.93:375,43,0	1/1:3,28:31:6:92,6,0	0/0:29,0:27:47.16:0,47,848	0/0:31,0:31:25.57:0,26,1411	0/0:126,0:121:99:0,282,5980	0/1:31,0:31:99:220,0,104	0/1:22,0:22:22.97:135,0,23	0/1:37,0:37:99:156,0,103	0/1:25,0:25:0.13:0,0,0	0/0:55,0:54:99:0,102,2615	0/0:22,0:22:63.10:0,63,1245	0/1:8,0:7:12.37:12,0,299
chr10	72439110	.	TGTGC	T	1236.29	PASS	AB=0.959;AC=14;AF=0.269;AN=52;BaseQRankSum=12.737;DP=920;FS=5.223;HRun=0;HaplotypeScore=227.7447;InbreedingCoeff=0.2245;MQ=53.40;MQ0=17;MQRankSum=-0.781;QD=3.69;ReadPosRankSum=-0.253;VQSLOD=2.0619;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:48,0:45:7.66:43,8,0	0/0:15,0:15:33.07:0,33,523	./.	./.	0/0:19,0:19:38.70:0,39,674	0/0:25,0:25:57.03:0,57,1243	0/0:38,0:38:91.43:0,91,1760	0/0:27,0:23:68.84:0,69,995	0/0:32,0:32:86.15:0,86,1659	0/1:46,0:43:99:393,0,250	0/0:23,0:23:1.74:0,2,7	0/1:31,3:33:99:193,0,217	0/1:23,2:25:99:102,0,289	0/0:36,0:36:92.41:0,92,1670	0/0:46,0:45:99:0,114,2112	0/0:45,0:45:99:0,102,2066	1/1:25,0:25:24.77:249,25,0	1/1:31,0:31:6:58,6,0	0/0:29,0:27:56.58:0,57,765	0/0:30,0:30:60.40:0,60,1333	0/0:129,0:124:99:0,295,5503	0/1:30,4:33:99:165,0,338	0/1:22,1:23:89.27:89,0,154	0/1:37,1:38:87.84:88,0,197	0/1:23,0:23:0.15:0,0,0	0/0:53,0:52:99:0,110,2401	0/0:22,0:22:66.05:0,66,1198	0/1:8,0:7:12.39:12,0,247
chr10	72439114	.	CGT	C	317.43	PASS	AB=0.957;AC=12;AF=0.231;AN=52;BaseQRankSum=6.724;DP=928;FS=7.300;HRun=0;HaplotypeScore=201.8551;InbreedingCoeff=0.0535;MQ=53.28;MQ0=17;MQRankSum=-2.067;QD=0.96;ReadPosRankSum=0.390;VQSLOD=1.6075;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:42:2.36:12,2,0	0/1:13,2:15:15.09:15,0,231	./.	./.	0/1:20,1:20:35.98:36,0,412	0/0:27,0:27:48.16:0,48,755	0/1:39,1:40:15.36:15,0,1141	0/0:30,1:28:23.18:0,23,683	0/1:32,3:35:59.05:59,0,926	0/1:43,1:42:99:188,0,341	0/0:22,0:22:2.02:0,2,37	0/0:35,0:34:30.31:0,30,604	0/0:26,0:26:41.46:0,41,598	0/0:35,2:37:38.51:0,39,1036	0/0:42,4:45:20.08:0,20,1173	0/0:42,0:42:63.91:0,64,1056	0/1:25,0:25:80.26:87,0,80	1/1:30,0:30:2.74:12,3,0	0/0:26,1:24:10.97:0,11,487	0/0:28,0:28:59.80:0,60,838	0/0:123,5:124:14.72:0,15,3098	0/0:32,1:32:41.83:0,42,576	0/0:24,0:24:33.92:0,34,402	0/0:38,0:39:28.96:0,29,288	0/1:22,0:22:0.19:0,0,0	0/1:52,2:53:28.14:28,0,1287	0/0:24,0:24:27.13:0,27,722	0/0:8,0:7:9.03:0,9,127
chr10	72439286	.	T	TATGG	265.72	PASS	AB=0.560;AC=1;AF=0.018;AN=56;BaseQRankSum=6.835;DP=1024;FS=2.661;HRun=0;HaplotypeScore=205.8009;InbreedingCoeff=0.3724;MQ=56.29;MQ0=9;MQRankSum=-5.129;QD=18.98;ReadPosRankSum=-2.574;VQSLOD=3.2117;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,117,2370	0/0:11,0:11:27.08:0,27,513	0/0:60,0:22:30.32:0,30,859	0/0:66,0:27:37.15:0,37,1265	0/0:14,0:14:39.11:0,39,777	0/0:29,0:29:81.16:0,81,1546	0/0:35,0:35:99:0,99,1993	0/0:42,0:42:99:0,126,2480	0/0:38,0:38:99:0,101,2088	0/0:40,0:40:99:0,114,2174	0/0:14,0:14:42.14:0,42,866	0/0:45,0:45:99:0,116,2180	0/0:22,0:22:63.18:0,63,1211	0/0:43,0:43:99:0,123,2436	0/0:40,0:40:99:0,113,2250	0/0:34,0:34:99:0,99,2007	0/0:21,0:22:53.42:0,53,912	0/1:2,7:14:5:340,0,5	0/0:28,0:28:70.67:0,71,1517	0/0:36,0:36:99:0,106,2052	0/0:126,0:127:99:0,349,6914	0/0:21,0:21:57.18:0,57,1155	0/0:20,0:20:60.19:0,60,1200	0/0:52,0:51:99:0,111,2457	0/0:30,0:30:87.28:0,87,1756	0/0:47,0:47:99:0,130,2638	0/0:22,0:22:66.19:0,66,1270	0/0:21,0:21:60.21:0,60,1250
chr10	72440071	.	AC	A	1186.41	PASS	AB=0.798;AC=5;AF=0.089;AN=56;BaseQRankSum=8.657;DP=573;FS=15.570;HRun=1;HaplotypeScore=86.8814;InbreedingCoeff=-0.0929;MQ=54.71;MQ0=10;MQRankSum=-4.088;QD=8.66;ReadPosRankSum=-2.603;VQSLOD=-0.6467;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,14:32:99:281,0,555	0/0:10,0:10:30.10:0,30,451	0/1:10,1:3:2.55:3,0,36	0/0:8,0:6:14.62:0,15,161	0/0:32,0:32:96.24:0,96,1345	0/0:24,0:24:69.23:0,69,1019	0/0:26,0:26:75.20:0,75,1108	0/0:37,0:32:90.46:0,90,1171	0/0:12,0:12:36.11:0,36,526	0/1:28,0:27:99:201,0,604	0/1:17,17:34:99:567,0,515	0/0:14,0:14:23.89:0,24,308	0/0:13,0:13:29.68:0,30,295	0/0:15,0:15:45.14:0,45,660	0/0:16,0:16:48.14:0,48,673	0/0:14,0:14:42.12:0,42,596	0/1:18,13:31:99:246,0,656	0/0:25,0:25:31.37:0,31,606	0/0:24,0:23:69.07:0,69,878	0/0:28,0:28:84.24:0,84,1198	0/0:19,0:18:54.17:0,54,798	0/0:21,0:20:57.04:0,57,628	0/0:21,0:20:45.05:0,45,452	0/0:13,0:13:27.08:0,27,364	0/0:17,0:17:11.79:0,12,296	0/0:29,0:29:70.48:0,70,1170	0/0:12,0:12:36.12:0,36,540	0/0:6,0:6:18.04:0,18,233
chr10	72440072	.	CAAACAAA	C	1632.06	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=3.088;DP=578;FS=5.576;HRun=0;HaplotypeScore=147.7028;InbreedingCoeff=0.8400;MQ=54.72;MQ0=9;MQRankSum=-3.341;QD=18.55;ReadPosRankSum=1.512;VQSLOD=2.7046;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:59.99:0,60,860	0/0:10,0:10:27.09:0,27,852	0/0:12,0:3:4.11:0,4,80	0/1:7,0:6:4:4,0,143	0/0:29,0:29:69.23:0,69,1865	0/0:24,0:24:57.18:0,57,1541	0/0:27,0:27:54.12:0,54,1258	0/0:35,0:30:39.13:0,39,638	0/0:12,0:12:15.05:0,15,409	0/0:11,0:34:72.66:0,73,1287	0/0:34,0:34:74.42:0,74,1231	1/1:6,8:14:6.02:137,6,0	1/1:5,8:13:15.05:336,15,0	0/0:15,0:15:27.09:0,27,851	0/0:14,0:14:33.11:0,33,818	0/0:14,0:14:27.09:0,27,634	0/0:33,0:33:44.81:0,45,753	0/0:17,0:26:18.06:0,18,340	0/0:25,0:24:51.17:0,51,1063	0/0:27,0:27:51.17:0,51,1206	0/0:19,0:18:30.09:0,30,949	1/1:9,12:20:36.12:632,36,0	1/1:8,11:19:16.28:381,16,0	1/1:13,0:13:21.06:309,21,0	0/0:5,0:18:15.04:0,15,215	0/0:28,0:28:61.76:0,62,1943	0/0:13,0:13:24.08:0,24,658	0/0:5,0:5:12.04:0,12,236
chr10	72440079	.	A	AC	360.50	PASS	AB=0.898;AC=4;AF=0.071;AN=56;BaseQRankSum=2.325;DP=570;FS=3.199;HRun=0;HaplotypeScore=91.9432;InbreedingCoeff=-0.0871;MQ=54.81;MQ0=6;MQRankSum=-0.848;QD=6.11;ReadPosRankSum=-0.848;VQSLOD=2.9714;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:69.03:0,69,906	0/0:11,0:11:33.10:0,33,444	0/0:14,0:4:9.03:0,9,116	0/0:8,0:6:3.09:0,3,159	0/0:32,0:32:96.30:0,96,1308	0/0:23,0:23:66.22:0,66,922	0/0:29,0:29:87.23:0,87,1149	0/0:30,0:30:75.09:0,75,929	0/0:9,0:9:27.07:0,27,359	0/0:35,0:34:87.09:0,87,1111	0/0:37,0:36:98.28:0,98,1285	0/0:13,0:13:16.76:0,17,152	0/1:12,0:12:17.54:18,0,152	0/0:12,0:12:36.10:0,36,473	0/0:15,0:15:45.15:0,45,629	0/0:15,0:15:42.12:0,42,555	0/0:34,1:35:73.11:0,73,971	0/0:23,0:23:42.14:0,42,569	0/0:29,0:28:84.24:0,84,1080	0/0:26,0:26:78.23:0,78,1042	0/0:15,0:14:42.13:0,42,572	0/1:19,0:18:99:209,0,265	0/1:15,0:15:18.72:19,0,127	0/1:4,9:13:76.62:223,0,77	0/0:19,0:18:29.28:0,29,254	0/0:27,0:27:78.24:0,78,1059	0/0:11,0:11:33.11:0,33,461	0/0:7,0:7:12.74:0,13,197
chr10	72440718	.	T	TCTC	7910.42	PASS	AB=0.784;AC=31;AF=0.554;AN=56;BaseQRankSum=-12.531;DP=658;FS=6.962;HRun=0;HaplotypeScore=128.9743;InbreedingCoeff=0.5110;MQ=67.52;MQ0=19;MQRankSum=3.969;QD=16.31;ReadPosRankSum=-2.068;VQSLOD=3.8836;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:33:30.38:0,30,279	0/1:3,5:9:33.30:112,0,33	1/1:51,0:15:2.74:12,3,0	0/1:61,0:26:0.30:0,0,38	1/1:6,8:14:15.05:299,15,0	0/1:10,7:18:27.28:226,0,27	1/1:10,10:21:12.04:217,12,0	1/1:17,13:32:40.51:670,41,0	0/1:10,12:23:9.21:569,0,9	0/1:11,0:21:8.02:8,0,155	0/0:10,0:18:16.48:0,16,117	0/0:6,0:21:38.71:0,39,278	0/0:4,0:13:29.76:0,30,212	1/1:4,12:18:24.08:482,24,0	1/1:5,20:28:48.16:947,48,0	0/1:13,24:39:12.46:1206,0,12	0/0:4,0:14:29.75:0,30,209	0/0:4,0:12:20.74:0,21,147	1/1:6,10:16:33.01:506,33,0	1/1:8,14:23:30.06:526,30,0	1/1:7,24:33:36.12:701,36,0	0/1:7,0:13:10.50:11,0,58	0/0:8,0:20:19.41:0,19,130	0/0:8,0:20:26.78:0,27,189	0/0:4,0:18:23.81:0,24,167	1/1:4,10:15:27.09:494,27,0	1/1:9,20:29:43.22:805,43,0	1/1:1,6:10:6.02:120,6,0
chr10	72440758	.	CTCT	C	5301.86	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=9.755;DP=630;FS=3.840;HRun=0;HaplotypeScore=131.7262;InbreedingCoeff=0.8611;MQ=58.80;MQ0=15;MQRankSum=-7.429;QD=25.86;ReadPosRankSum=1.454;VQSLOD=4.9954;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:35:16.75:17,0,665	0/0:14,0:14:30.97:0,31,609	0/0:38,0:16:23.91:0,24,425	0/0:36,0:12:5.02:0,5,256	0/0:19,0:18:51.14:0,51,971	0/0:24,0:23:30.79:0,31,842	0/0:17,0:17:15.85:0,16,527	0/0:21,0:20:42.09:0,42,659	0/0:20,0:20:48.05:0,48,825	1/1:3,17:19:51.11:668,51,0	1/1:4,14:18:36.08:526,36,0	1/1:5,20:25:60.16:844,60,0	1/1:3,15:18:33.10:488,33,0	0/0:20,0:20:45.10:0,45,808	0/0:33,0:32:69.18:0,69,1228	0/0:30,0:30:84.21:0,84,1454	1/1:5,11:16:39.07:534,39,0	0/0:20,0:19:0.10:0,0,416	0/0:19,0:18:48.09:0,48,725	0/0:25,0:25:66.08:0,66,1161	0/0:29,0:29:50.10:0,50,977	1/1:1,11:12:36.11:534,36,0	1/1:3,17:20:45.14:673,45,0	1/1:8,14:22:30.05:380,30,0	1/1:1,17:18:45.10:638,45,0	0/0:18,0:18:51.16:0,51,1021	0/0:32,0:32:60.69:0,61,1122	0/0:10,0:10:15.05:0,15,297
chr10	72440963	.	C	CT	1231.74	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.588;DP=642;FS=4.400;HRun=9;HaplotypeScore=59.9160;InbreedingCoeff=0.9146;MQ=75.28;MQ0=0;MQRankSum=-2.109;QD=21.61;ReadPosRankSum=-0.792;VQSLOD=4.1946;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,29:33:61.15:889,61,0	0/0:3,0:3:8.80:0,9,65	0/0:20,0:22:11.18:0,11,274	0/0:11,0:11:14.07:0,14,182	0/0:19,0:19:50.97:0,51,443	0/0:27,0:27:74.97:0,75,651	0/0:28,0:28:77.94:0,78,669	0/0:36,1:37:10.61:0,11,665	0/0:22,0:23:56.01:0,56,475	0/0:31,0:31:80.96:0,81,700	0/0:19,0:19:47.97:0,48,417	0/0:22,0:22:59.98:0,60,521	0/0:22,0:22:62.99:0,63,547	0/0:23,0:23:62.96:0,63,542	0/0:32,0:32:83.98:0,84,729	0/0:28,0:28:77.96:0,78,674	0/0:23,0:23:65.98:0,66,573	1/1:6,18:24:42.11:465,42,0	0/0:18,0:18:38.96:0,39,339	0/0:27,0:27:62.82:0,63,535	0/0:17,0:17:47.98:0,48,417	0/0:17,1:18:14.80:0,15,357	0/0:18,0:18:50.99:0,51,442	0/0:24,1:24:32.80:0,33,514	0/0:19,0:19:50.98:0,51,443	0/0:25,0:25:59.85:0,60,509	0/0:35,0:35:86.97:0,87,755	0/0:13,0:13:23.95:0,24,208
chr10	72442815	.	TA	T	679.63	PASS	AB=1.000;AC=3;AF=0.056;AN=54;BaseQRankSum=6.838;DP=534;FS=2.689;HRun=6;HaplotypeScore=51.1206;InbreedingCoeff=0.8659;MQ=67.20;MQ0=0;MQRankSum=-0.637;QD=17.43;ReadPosRankSum=1.313;VQSLOD=3.1915;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:29:72.18:774,72,0	0/0:7,0:7:21.06:0,21,263	./.	0/1:9,0:9:0.30:1,0,0	0/0:25,0:25:69.22:0,69,892	0/0:20,0:20:60.20:0,60,790	0/0:13,0:13:39.11:0,39,498	0/0:33,0:33:93.29:0,93,1198	0/0:15,0:15:42.14:0,42,553	0/0:26,0:26:66.20:0,66,852	0/0:17,0:17:51.17:0,51,671	0/0:15,0:15:42.14:0,42,551	0/0:11,0:11:27.09:0,27,353	0/0:20,0:20:57.14:0,57,730	0/0:22,0:22:60.18:0,60,769	0/0:19,0:19:57.19:0,57,750	0/0:32,0:32:87.21:0,87,1081	0/0:19,0:19:51.17:0,51,667	0/0:17,0:17:39.13:0,39,513	0/0:22,0:22:57.18:0,57,736	0/0:23,0:23:60.20:0,60,790	0/0:9,0:9:24.07:0,24,303	0/0:22,0:22:63.19:0,63,814	0/0:18,0:18:45.13:0,45,576	0/0:22,0:22:66.21:0,66,866	0/0:34,0:34:90.27:0,90,1148	0/0:25,0:25:72.22:0,72,932	0/0:7,0:7:21.07:0,21,276
chr10	72443418	.	CATT	C	380.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.473;DP=327;FS=16.881;HRun=0;HaplotypeScore=56.6758;InbreedingCoeff=0.6166;MQ=77.86;MQ0=1;MQRankSum=-2.582;QD=23.79;ReadPosRankSum=2.638;VQSLOD=1.8523;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:29.96:0,30,252	0/0:4,0:4:9.03:0,9,190	0/0:10,0:9:18.06:0,18,265	0/0:12,0:12:13.05:0,13,230	0/0:10,0:10:27.06:0,27,491	0/0:19,0:19:54.19:0,54,1141	0/0:6,0:6:14.99:0,15,234	0/0:34,0:34:84.25:0,84,1666	0/0:7,0:7:15.05:0,15,295	0/0:13,0:13:33.04:0,33,327	0/0:9,0:9:20.98:0,21,189	0/0:2,0:2:6.02:0,6,82	0/0:6,0:6:18.05:0,18,228	0/0:7,0:7:15.02:0,15,239	0/0:9,0:9:15.02:0,15,240	0/0:7,0:7:15.05:0,15,304	0/0:21,0:21:59.78:0,60,472	1/1:1,15:16:30.10:475,30,0	0/0:20,0:19:54.18:0,54,1086	0/0:8,0:8:21.04:0,21,346	0/0:4,0:4:9.02:0,9,152	0/0:3,0:3:6.02:0,6,96	0/0:6,0:6:12.01:0,12,133	0/0:3,0:3:6:0,6,65	0/0:15,0:14:35.97:0,36,357	0/0:17,0:16:39.11:0,39,683	0/0:22,0:22:60.17:0,60,1167	0/0:23,0:23:66.21:0,66,1354
chr10	72443425	.	AT	A	486.74	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=10.703;DP=298;FS=10.162;HRun=9;HaplotypeScore=39.6672;InbreedingCoeff=0.7728;MQ=71.84;MQ0=2;MQRankSum=0.194;QD=4.97;ReadPosRankSum=2.155;VQSLOD=-0.0724;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,11:13:27.01:247,27,0	0/0:5,0:5:9.03:0,9,104	0/0:7,0:6:15.03:0,15,155	0/0:11,0:9:17.58:0,18,158	0/0:10,0:9:21.06:0,21,242	0/0:19,0:19:54.16:0,54,623	0/0:5,0:5:9.03:0,9,104	0/0:36,0:35:92.63:0,93,1036	0/0:6,0:6:15.04:0,15,173	1/1:11,0:11:16.30:65,16,0	1/1:8,0:8:13.32:41,13,0	1/1:2,0:2:5.44:24,5,0	1/1:6,0:6:15.97:69,16,0	0/0:4,0:4:9.03:0,9,104	0/0:5,0:5:9.03:0,9,104	0/0:5,0:5:12.04:0,12,138	1/1:21,0:20:44.22:136,44,0	0/1:16,0:16:5.17:5,0,21	0/0:20,0:19:51.13:0,51,570	0/0:7,0:7:15.04:0,15,173	0/0:3,0:3:6.02:0,6,69	1/1:2,0:2:2.49:9,2,0	1/1:3,0:3:2.74:12,3,0	1/1:2,0:2:2.74:12,3,0	1/1:14,0:13:19.97:61,20,0	0/0:14,0:13:19.48:0,19,270	0/0:20,0:20:57.17:0,57,658	0/0:22,0:22:63.19:0,63,727
chr10	72443433	.	TTA	T	1726.55	PASS	AB=0.923;AC=19;AF=0.339;AN=56;BaseQRankSum=6.651;DP=288;FS=5.118;HRun=0;HaplotypeScore=39.4606;InbreedingCoeff=0.7176;MQ=65.98;MQ0=8;MQRankSum=2.458;QD=23.33;ReadPosRankSum=1.049;VQSLOD=3.4050;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:31.21:0,31,156	0/0:4,1:5:9.03:0,9,171	0/0:6,0:5:15.03:0,15,244	0/0:9,0:7:14.84:0,15,197	0/0:11,0:10:29.80:0,30,449	0/0:19,0:19:54.19:0,54,1022	0/0:3,0:3:9.03:0,9,170	0/0:43,0:36:99:0,102,1752	0/0:6,0:6:15.05:0,15,284	1/1:0,8:8:21.05:287,21,0	1/1:0,8:8:18.06:263,18,0	1/1:3,0:3:1.77:5,2,0	1/1:6,1:7:7.44:55,7,0	0/0:4,0:4:9.03:0,9,171	0/0:4,0:4:9.03:0,9,171	0/0:4,0:4:12.04:0,12,228	1/1:0,21:20:60.20:876,60,0	0/0:18,0:17:34.95:0,35,240	0/0:19,0:18:54.14:0,54,928	0/0:5,0:5:15.05:0,15,284	0/0:3,0:3:6.02:0,6,114	1/1:1,0:1:0.89:2,1,0	1/1:1,0:1:0.89:2,1,0	1/1:1,0:1:0.89:2,1,0	1/1:0,12:12:27.09:395,27,0	0/1:11,1:11:10.82:11,0,469	0/0:21,0:21:60.18:0,60,1087	0/0:21,0:21:63.22:0,63,1193
chr10	72443434	.	TA	T	879.85	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=8.447;DP=288;FS=13.425;HRun=3;HaplotypeScore=37.2374;InbreedingCoeff=0.7532;MQ=65.87;MQ0=9;MQRankSum=3.254;QD=11.73;ReadPosRankSum=1.855;VQSLOD=0.4439;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:15.39:16,0,15	0/0:5,0:5:9.03:0,9,122	0/0:6,0:5:13.28:0,13,154	0/0:9,0:7:14.76:0,15,141	0/0:11,0:10:29.80:0,30,336	0/0:20,0:20:54.18:0,54,733	0/0:3,0:3:9.03:0,9,122	0/0:44,0:36:99:0,99,1255	0/0:6,0:6:15.05:0,15,203	1/1:8,0:8:17.37:98,17,0	1/1:8,0:8:17.42:98,17,0	1/1:0,3:3:6.02:74,6,0	1/1:1,6:7:17.95:201,18,0	0/0:4,0:4:9.03:0,9,122	0/0:4,0:4:9.03:0,9,122	0/0:4,0:4:12.04:0,12,163	1/1:21,0:20:58.05:327,58,0	0/0:19,0:18:38.60:0,39,288	0/0:17,0:16:48.15:0,48,636	0/0:5,0:5:15.05:0,15,204	0/0:2,0:2:6.02:0,6,81	1/1:0,1:1:3.01:37,3,0	1/1:0,1:1:3.01:37,3,0	1/1:0,1:1:3.01:37,3,0	1/1:12,0:11:26.12:147,26,0	0/0:12,0:11:16.53:0,17,356	0/0:21,0:21:60.16:0,60,778	0/0:21,0:21:63.21:0,63,855
chr10	72444066	.	CTCTTT	C	599.86	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.401;DP=396;FS=12.609;HRun=0;HaplotypeScore=68.5572;InbreedingCoeff=0.6440;MQ=60.63;MQ0=5;MQRankSum=0.459;QD=27.27;ReadPosRankSum=2.812;VQSLOD=2.2098;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:92.70:0,93,2124	0/0:8,0:7:18.06:0,18,500	0/0:21,0:9:0.11:0,0,390	0/0:15,0:7:10.60:0,11,202	0/0:6,0:6:18.03:0,18,311	0/0:11,0:11:33.08:0,33,697	0/0:16,0:15:42.12:0,42,1026	0/0:35,0:34:93.22:0,93,2083	0/0:12,0:12:30.08:0,30,649	0/0:14,0:14:42.13:0,42,968	0/0:13,0:12:36.05:0,36,828	0/0:8,0:8:24.05:0,24,541	0/0:8,0:8:24.04:0,24,486	0/0:13,0:12:33.09:0,33,899	0/0:7,0:7:17.02:0,17,361	0/0:6,0:6:18.05:0,18,394	0/0:32,0:32:78.21:0,78,1954	1/1:1,19:22:19.89:691,20,0	0/0:15,0:14:42.12:0,42,896	0/0:17,0:17:47.85:0,48,1053	0/0:13,0:13:36.06:0,36,754	0/0:9,0:9:27.08:0,27,707	0/0:12,0:12:33.11:0,33,931	0/0:11,0:11:20.92:0,21,450	0/0:11,0:11:33.10:0,33,733	0/0:11,0:10:27.96:0,28,594	0/0:13,0:13:39.13:0,39,1019	0/0:1,0:1:3.01:0,3,91
chr10	72445248	.	T	TA	1071.68	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=-0.129;DP=632;FS=10.935;HRun=10;HaplotypeScore=63.3582;InbreedingCoeff=0.5665;MQ=73.02;MQ0=0;MQRankSum=-0.649;QD=12.91;ReadPosRankSum=2.132;VQSLOD=2.3787;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,41:49:71.01:1166,71,0	0/0:8,0:8:23.97:0,24,197	0/1:12,0:14:0.10:0,0,162	0/0:8,0:8:8.95:0,9,71	0/0:16,0:16:35.92:0,36,291	0/0:24,0:24:48.80:0,49,392	0/0:28,0:29:73.91:0,74,593	0/0:42,0:42:80.81:0,81,664	0/0:14,0:15:34.98:0,35,277	0/0:34,0:33:83.88:0,84,689	0/0:19,0:19:41.92:0,42,345	0/0:20,0:20:53.90:0,54,439	0/0:16,0:16:41.95:0,42,345	0/0:23,0:24:55.91:0,56,449	0/0:19,0:21:49.93:0,50,400	0/0:26,0:26:65.92:0,66,542	0/0:33,0:34:85.88:0,86,690	0/0:17,0:18:42.99:0,43,332	0/1:18,0:20:1.25:1,0,261	0/0:24,0:24:62.91:0,63,517	0/0:24,0:24:68.91:0,69,564	0/0:12,0:12:26.96:0,27,222	0/0:20,1:21:21.93:0,22,384	0/0:27,1:28:45.92:0,46,584	0/0:15,1:16:6.96:0,7,264	0/0:32,0:32:71.87:0,72,591	0/0:24,0:25:61.90:0,62,491	0/0:12,0:12:23.96:0,24,197
chr10	72446041	.	TACACACACACACACAC	T	8843.89	PASS	AB=0.778;AC=19;AF=0.339;AN=56;BaseQRankSum=11.977;DP=679;FS=7.161;HRun=0;HaplotypeScore=271.5929;InbreedingCoeff=0.7274;MQ=66.43;MQ0=11;MQRankSum=-8.082;QD=33.88;ReadPosRankSum=4.109;VQSLOD=2.9310;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:32:25.22:63,0,25	0/0:11,0:14:27.09:0,27,1682	0/0:45,0:28:21.07:0,21,793	0/0:42,0:23:15.04:0,15,494	0/0:25,0:25:53.87:0,54,3617	0/0:21,0:21:30.10:0,30,2101	0/0:41,0:41:69.24:0,69,4705	0/0:17,0:17:24.07:0,24,1103	0/0:16,0:17:30.10:0,30,2056	1/1:13,23:35:68.80:2079,69,0	1/1:3,16:18:23.63:825,24,0	1/1:8,12:20:24.08:1056,24,0	1/1:6,6:12:6.02:265,6,0	0/0:16,0:16:24.08:0,24,1724	0/0:21,0:25:60.21:0,60,4047	0/0:20,0:22:45.63:0,46,2979	0/1:10,9:20:42.42:774,0,42	0/0:15,0:18:42.14:0,42,2870	0/0:17,0:18:27.56:0,28,1907	0/0:26,0:26:53.34:0,53,3804	0/0:28,0:28:54.19:0,54,3598	1/1:9,20:29:30.06:1184,30,0	1/1:12,6:19:9.03:399,9,0	1/1:14,10:24:18.06:791,18,0	1/1:14,13:26:23.15:1269,23,0	0/1:21,0:22:99:138,0,2297	0/0:31,0:33:81.28:0,81,5171	0/0:8,0:8:21.07:0,21,1531
chr10	72446483	.	C	CT	10161.33	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-15.344;DP=786;FS=0.000;HRun=6;HaplotypeScore=74.1153;InbreedingCoeff=0.9999;MQ=80.35;MQ0=0;MQRankSum=-3.177;QD=31.95;ReadPosRankSum=3.583;VQSLOD=5.0816;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,43:48:99:1321,105,0	0/0:11,0:11:30.06:0,30,306	0/0:28,0:27:60.01:0,60,598	0/0:27,0:28:45.10:0,45,637	0/0:38,0:38:99:0,99,1002	0/0:26,0:26:75.17:0,75,765	0/0:15,0:15:42.09:0,42,429	0/0:36,0:36:87.17:0,87,882	0/0:32,0:32:90.19:0,90,911	1/1:4,39:43:99:1422,114,0	1/1:5,28:33:81.22:998,81,0	1/1:2,22:24:63.16:775,63,0	1/1:1,26:27:72.23:905,72,0	0/0:28,1:29:43.44:0,43,758	0/0:30,0:30:87.20:0,87,888	0/0:35,0:35:99:0,99,1010	1/1:2,35:37:99:1283,102,0	1/1:1,16:17:45.14:566,45,0	0/0:32,0:32:84.18:0,84,856	0/0:24,0:23:69.09:0,69,686	0/0:30,0:30:81.18:0,81,826	1/1:3,22:25:69.20:853,69,0	1/1:0,13:13:39.12:491,39,0	1/1:2,23:25:60.19:755,60,0	1/1:3,23:26:63.20:793,63,0	0/0:31,1:32:52.46:0,52,850	0/0:22,0:22:66.11:0,66,662	0/0:19,0:20:57.60:0,58,583
chr10	72446915	.	TA	T	1067.22	PASS	AB=0.882;AC=3;AF=0.054;AN=56;BaseQRankSum=8.529;DP=628;FS=7.100;HRun=10;HaplotypeScore=61.6041;InbreedingCoeff=0.6241;MQ=64.63;MQ0=0;MQRankSum=1.717;QD=16.42;ReadPosRankSum=2.101;VQSLOD=4.1527;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,46:50:99:1119,129,0	0/0:11,0:11:30.08:0,30,332	0/1:13,2:14:53.90:54,0,82	0/0:12,0:10:12.49:0,12,124	0/0:29,0:29:70.06:0,70,758	0/0:20,1:22:27.18:0,27,558	0/0:21,0:21:57.14:0,57,618	0/0:32,0:32:72.65:0,73,790	0/0:22,1:23:37.10:0,37,628	0/0:29,1:30:52.15:0,52,790	0/0:18,1:19:15.78:0,16,370	0/0:21,0:21:60.05:0,60,617	0/0:22,0:22:57.06:0,57,599	0/0:16,0:16:39.07:0,39,419	0/0:27,1:28:75.19:0,75,822	0/0:29,0:30:52.58:0,53,739	0/0:26,0:26:72.15:0,72,771	0/0:8,0:7:18.03:0,18,189	0/0:26,1:27:46.12:0,46,727	0/0:22,0:22:60.15:0,60,657	0/0:15,0:15:42.11:0,42,464	0/0:23,0:23:63.03:0,63,635	0/0:21,0:21:57.12:0,57,606	0/0:19,0:18:48.05:0,48,514	0/0:19,0:19:51.09:0,51,550	0/0:33,0:33:78.19:0,78,849	0/0:23,0:23:69.19:0,69,763	0/0:11,0:11:24.93:0,25,256
chr10	72447155	.	T	TA	5226.88	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.637;DP=698;FS=0.378;HRun=0;HaplotypeScore=104.2857;InbreedingCoeff=0.9979;MQ=84.21;MQ0=0;MQRankSum=0.254;QD=44.67;ReadPosRankSum=3.874;VQSLOD=4.3777;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,2013	0/0:6,0:6:18.06:0,18,252	0/0:26,0:25:75.20:0,75,1005	0/0:20,0:20:28.99:0,29,671	0/0:18,0:18:51.15:0,51,693	0/0:22,0:22:66.22:0,66,923	0/0:16,0:16:48.16:0,48,671	0/0:31,0:31:90.30:0,90,1259	0/0:28,0:28:84.28:0,84,1175	0/0:33,0:33:99:0,99,1385	0/0:19,0:19:57.19:0,57,797	1/1:1,27:28:78.27:1247,78,0	1/1:1,19:20:57.19:911,57,0	0/0:24,0:24:72.22:0,72,989	0/0:33,0:33:93.31:0,93,1300	0/0:25,0:25:75.25:0,75,1048	0/0:33,0:33:99:0,99,1358	0/0:28,0:28:78.23:0,78,1070	0/0:24,0:24:69.23:0,69,962	0/0:22,0:22:66.22:0,66,918	0/0:43,0:43:99:0,129,1749	1/1:1,17:18:51.17:815,51,0	1/1:0,22:22:57.19:911,57,0	1/1:1,28:29:84.29:1343,84,0	0/0:15,0:15:41.98:0,42,587	0/0:20,0:20:57.17:0,57,779	0/0:34,0:34:99:0,102,1391	0/0:11,0:11:33.07:0,33,439
chr10	72447679	.	A	AG	803.40	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.964;DP=590;FS=3.097;HRun=1;HaplotypeScore=65.6614;InbreedingCoeff=0.9628;MQ=55.01;MQ0=13;MQRankSum=-0.260;QD=33.48;ReadPosRankSum=1.408;VQSLOD=3.4518;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:84.21:0,84,1068	0/0:8,0:8:20.96:0,21,233	0/0:11,0:7:18.03:0,18,234	0/0:10,0:7:17.97:0,18,201	0/0:27,0:27:56.10:0,56,738	0/0:24,0:20:51.17:0,51,662	0/0:19,0:19:51.10:0,51,627	0/0:38,0:33:78.22:0,78,992	0/0:13,0:13:27.09:0,27,351	0/0:31,0:31:93.30:0,93,1207	0/0:21,0:21:48.11:0,48,604	0/0:22,0:22:51.11:0,51,639	0/0:13,0:13:30.03:0,30,369	0/0:15,0:15:33.11:0,33,429	0/0:34,0:34:83.99:0,84,1090	0/0:22,0:22:57.14:0,57,721	0/0:37,0:33:81.26:0,81,1051	1/1:1,23:23:60.20:898,60,0	0/0:29,0:28:78.25:0,78,1003	0/0:21,0:21:60.11:0,60,741	0/0:23,0:19:57.19:0,57,740	0/0:10,0:10:30.05:0,30,370	0/0:18,0:17:42.14:0,42,545	0/0:14,0:13:36.12:0,36,467	0/0:17,0:17:45.09:0,45,556	0/0:18,0:16:48.13:0,48,606	0/0:27,0:27:62.94:0,63,797	0/0:7,0:7:15.05:0,15,195
chr10	72449600	.	C	CCACAGTA	16476.97	PASS	AB=0.944;AC=55;AF=0.982;AN=56;BaseQRankSum=1.358;DP=366;FS=20.331;HRun=0;HaplotypeScore=371.8154;InbreedingCoeff=-0.0390;MQ=78.25;MQ0=0;MQRankSum=-2.177;QD=45.02;ReadPosRankSum=1.963;VQSLOD=3.4090;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:12.04:397,12,0	1/1:3,0:3:3.48:89,3,0	1/1:11,3:14:16.61:858,17,0	0/1:16,1:16:9.55:796,0,10	1/1:16,0:16:21.52:556,22,0	1/1:14,0:14:18.53:577,19,0	1/1:4,0:4:3.01:89,3,0	1/1:16,0:16:34:924,34,0	1/1:16,0:16:21.01:450,21,0	1/1:20,0:20:38.42:948,38,0	1/1:18,0:18:36.11:971,36,0	1/1:7,0:7:15.04:402,15,0	1/1:11,0:11:21.07:620,21,0	1/1:6,0:6:12.04:376,12,0	1/1:14,0:14:18.06:512,18,0	1/1:11,0:11:17.73:491,18,0	1/1:14,0:14:18.06:541,18,0	1/1:11,0:11:12.04:366,12,0	1/1:5,0:4:9.03:318,9,0	1/1:12,0:12:24.08:640,24,0	1/1:13,0:13:21.04:387,21,0	1/1:19,0:19:27.08:720,27,0	1/1:17,0:17:26.88:723,27,0	1/1:16,0:16:27.08:564,27,0	1/1:13,0:13:27.56:860,28,0	1/1:18,0:18:24.08:675,24,0	1/1:23,0:23:48.12:1316,48,0	1/1:3,0:3:9.03:311,9,0
chr10	72449605	.	G	GTACACAGAATGATACAGTATTAT	3372.75	PASS	AB=0.758;AC=30;AF=0.938;AN=32;BaseQRankSum=-2.057;DP=65;FS=10.936;HRun=0;HaplotypeScore=44.0812;InbreedingCoeff=-0.2117;MQ=148.59;MQ0=0;MQRankSum=-0.812;QD=58.15;ReadPosRankSum=-1.191;VQSLOD=0.6859;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:5,0:9:4.83:1068,0,5	0/1:11,1:13:9.69:1419,0,10	1/1:2,0:2:2.98:22,3,0	./.	./.	./.	1/1:2,0:2:5.96:45,6,0	1/1:1,0:1:2.98:22,3,0	1/1:2,0:3:6.01:118,6,0	1/1:1,0:1:3:25,3,0	./.	./.	1/1:4,0:5:3.01:50,3,0	./.	1/1:1,0:1:3.01:49,3,0	./.	./.	1/1:3,0:3:6.02:114,6,0	1/1:5,0:5:9.01:166,9,0	1/1:2,0:2:3:26,3,0	1/1:2,0:3:3.01:50,3,0	1/1:3,0:3:3:25,3,0	1/1:0,0:2:3.01:147,3,0	1/1:2,0:2:3:28,3,0	./.	./.
chr10	72450603	.	TG	T	450.13	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.190;DP=689;FS=1.029;HRun=2;HaplotypeScore=71.5615;InbreedingCoeff=0.9918;MQ=88.69;MQ0=0;MQRankSum=1.649;QD=30.01;ReadPosRankSum=1.541;VQSLOD=3.2773;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,1811	0/0:11,0:11:33.06:0,33,468	0/0:31,0:31:90.21:0,90,1223	0/0:30,0:30:76.09:0,76,1010	0/0:19,0:19:57.12:0,57,823	0/0:27,0:27:81.26:0,81,1166	0/0:22,0:22:66.18:0,66,938	0/0:30,0:30:87.23:0,87,1219	0/0:17,0:17:51.16:0,51,742	0/0:30,0:30:90.23:0,90,1262	0/0:19,0:19:54.17:0,54,777	0/0:21,0:21:63.21:0,63,935	0/0:23,0:23:63.21:0,63,935	0/0:19,0:19:57.13:0,57,797	0/0:32,0:32:90.30:0,90,1331	0/0:31,0:31:93.26:0,93,1355	0/0:29,0:29:84.24:0,84,1233	1/1:1,14:15:42.14:545,42,0	0/0:27,0:27:78.26:0,78,1159	0/0:24,0:24:69.18:0,69,987	0/0:26,0:26:78.18:0,78,1118	0/0:21,0:21:60.06:0,60,805	0/0:30,0:30:90.24:0,90,1318	0/0:34,0:33:93.27:0,93,1329	0/0:15,0:15:42.14:0,42,629	0/0:31,0:31:90.21:0,90,1276	0/0:25,0:25:75.20:0,75,1086	0/0:6,0:6:18.06:0,18,269
chr10	72452532	.	G	GC	4743.36	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=2.481;DP=655;FS=0.000;HRun=2;HaplotypeScore=68.9470;InbreedingCoeff=0.9750;MQ=70.43;MQ0=0;MQRankSum=-0.869;QD=38.56;ReadPosRankSum=2.881;VQSLOD=5.4186;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1371	0/0:7,0:7:17.63:0,18,183	0/0:7,0:7:20.94:0,21,223	0/0:10,0:11:6.63:0,7,137	0/0:32,0:32:93.28:0,93,1139	0/0:26,0:26:69.21:0,69,855	0/0:27,0:27:81.25:0,81,993	0/0:28,0:28:84.25:0,84,1022	0/0:26,0:26:72.23:0,72,892	1/1:0,16:16:48.16:691,48,0	1/1:0,9:9:24.08:339,24,0	0/0:26,0:26:75.22:0,75,917	0/0:20,0:20:57.17:0,57,693	0/0:29,0:29:78.21:0,78,941	0/0:27,0:27:75.22:0,75,916	0/0:16,0:16:48.13:0,48,571	1/1:2,36:38:99:1468,102,0	1/1:0,41:41:99:1598,111,0	0/0:27,0:27:78.22:0,78,934	0/0:25,0:25:66.18:0,66,802	0/0:59,0:59:99:0,171,2075	0/0:18,0:18:54.16:0,54,655	0/0:12,0:12:36.11:0,36,446	0/0:32,0:32:93.28:0,93,1140	1/1:0,19:19:45.15:647,45,0	0/0:15,0:15:42.13:0,42,520	0/0:13,0:13:39.12:0,39,483	0/0:11,0:11:33.08:0,33,393
chr10	72453370	.	C	CT	580.04	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=7.294;DP=467;FS=19.368;HRun=8;HaplotypeScore=55.3666;InbreedingCoeff=0.4506;MQ=73.12;MQ0=3;MQRankSum=2.445;QD=4.23;ReadPosRankSum=3.580;VQSLOD=-0.1679;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,19:26:39.10:438,39,0	0/0:9,0:9:24:0,24,216	0/0:16,0:12:3.73:0,4,55	0/1:20,0:11:0.02:0,0,91	0/0:17,0:17:39.01:0,39,357	0/0:25,0:25:71.63:0,72,619	0/0:18,0:18:51:0,51,459	0/0:20,0:20:50.88:0,51,439	0/0:14,0:14:42:0,42,379	0/0:20,0:20:54.01:0,54,486	0/0:21,0:21:50.93:0,51,441	1/1:18,0:18:29.99:112,30,0	0/1:8,0:8:11.43:11,0,67	0/0:7,0:7:17.98:0,18,159	0/0:10,0:10:23.98:0,24,213	0/0:10,0:10:30.01:0,30,271	0/0:24,0:24:43.73:0,44,396	0/1:19,0:19:51.96:52,0,55	0/0:18,0:18:44.96:0,45,400	0/0:19,0:19:41.95:0,42,366	0/0:8,0:8:21:0,21,188	0/1:18,0:18:23.41:33,0,23	0/1:16,0:16:28.28:28,0,144	1/1:11,0:11:18.82:64,19,0	0/0:17,0:17:38.86:0,39,327	0/0:25,0:25:65.89:0,66,584	0/0:14,0:15:38.01:0,38,322	0/0:17,0:17:32.98:0,33,295
chr10	72453378	.	T	TG	1534.98	PASS	AB=0.831;AC=13;AF=0.232;AN=56;BaseQRankSum=-3.556;DP=488;FS=16.025;HRun=9;HaplotypeScore=58.0181;InbreedingCoeff=0.5390;MQ=72.17;MQ0=5;MQRankSum=0.166;QD=9.53;ReadPosRankSum=3.841;VQSLOD=0.6862;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:23:33.36:87,0,33	0/0:9,0:9:23.98:0,24,205	0/1:19,0:11:12.78:13,0,37	0/1:24,0:11:6.49:6,0,44	0/0:21,0:21:53.88:0,54,447	0/0:25,0:25:57.84:0,58,492	0/0:18,0:18:47.97:0,48,412	0/0:21,0:22:49.97:0,50,409	0/0:17,0:17:44.84:0,45,376	0/0:23,0:23:50.95:0,51,438	0/0:18,0:18:38.98:0,39,336	1/1:2,18:21:39.08:420,39,0	0/1:4,7:11:10.98:118,0,11	0/0:8,0:8:20.97:0,21,176	0/0:13,0:13:23.93:0,24,198	0/0:13,0:13:32.96:0,33,282	0/0:16,0:16:35.97:0,36,312	0/1:5,12:17:4.42:356,0,4	0/0:20,0:20:50.02:0,50,426	0/0:19,0:19:32.96:0,33,280	0/0:10,0:10:23.97:0,24,203	1/1:5,8:13:24:250,24,0	1/1:9,10:20:20.97:212,21,0	1/1:3,10:13:8.06:246,8,0	0/0:14,0:15:28.97:0,29,235	0/0:26,0:26:59.95:0,60,518	0/0:18,0:18:44.77:0,45,360	0/0:16,0:15:29.97:0,30,260
chr10	72457433	.	C	CTATT	1729.81	PASS	AB=0.657;AC=9;AF=0.173;AN=52;BaseQRankSum=-5.898;DP=297;FS=6.968;HRun=0;HaplotypeScore=48.7460;InbreedingCoeff=0.6132;MQ=67.56;MQ0=0;MQRankSum=1.770;QD=26.21;ReadPosRankSum=0.637;VQSLOD=1.9689;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:18:15.90:0,16,142	0/0:4,0:4:12.04:0,12,191	./.	./.	0/0:18,0:18:18.05:0,18,265	0/0:20,0:20:36.11:0,36,549	0/0:8,0:8:9.01:0,9,119	0/0:31,0:31:27.09:0,27,428	0/0:6,0:6:12.04:0,12,190	1/1:4,3:7:9.03:214,9,0	1/1:7,4:11:12.04:265,12,0	0/0:5,0:5:6.02:0,6,95	0/0:9,0:9:15.05:0,15,231	0/0:9,0:9:15.04:0,15,217	0/0:7,0:7:12.04:0,12,189	0/0:6,0:6:15.05:0,15,237	1/1:7,10:18:30.10:676,30,0	0/1:11,11:23:17.53:577,0,18	0/0:18,0:18:24.08:0,24,374	0/0:6,0:6:3.01:0,3,48	0/0:2,0:2:3.01:0,3,48	0/0:6,0:6:9.03:0,9,143	0/0:5,0:5:3.01:0,3,48	0/0:4,0:4:9.03:0,9,143	1/1:5,2:7:6.02:143,6,0	0/0:12,0:12:15.05:0,15,230	0/0:13,0:13:24.08:0,24,381	0/0:17,0:17:18.03:0,18,238
chr10	72460089	.	CA	C	741.89	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.807;DP=623;FS=5.904;HRun=1;HaplotypeScore=57.1127;InbreedingCoeff=0.9954;MQ=89.53;MQ0=0;MQRankSum=-3.942;QD=32.26;ReadPosRankSum=1.208;VQSLOD=3.0646;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:60.20:837,60,0	0/0:7,0:7:21.07:0,21,335	0/0:24,0:24:69.10:0,69,970	0/0:26,0:26:78.22:0,78,1181	0/0:20,0:20:60.20:0,60,958	0/0:23,0:23:69.15:0,69,1048	0/0:23,0:23:66.23:0,66,1055	0/0:32,0:32:93.27:0,93,1380	0/0:26,0:26:78.25:0,78,1223	0/0:21,0:21:57.14:0,57,835	0/0:19,0:19:51.17:0,51,813	0/0:23,0:23:69.22:0,69,1077	0/0:20,0:20:57.18:0,57,885	0/0:18,0:18:54.17:0,54,838	0/0:28,0:28:84.28:0,84,1321	0/0:27,0:27:81.26:0,81,1271	0/0:19,0:19:57.19:0,57,910	0/0:19,0:19:57.17:0,57,886	0/0:18,0:18:54.17:0,54,814	0/0:27,0:27:81.26:0,81,1268	0/0:39,0:39:99:0,117,1796	0/0:23,0:23:69.20:0,69,1073	0/0:13,0:13:39.13:0,39,623	0/0:26,0:26:78.25:0,78,1221	0/0:18,0:18:54.16:0,54,802	0/0:26,0:26:78.25:0,78,1200	0/0:25,0:24:75.22:0,75,1147	0/0:10,0:10:30.08:0,30,449
chr10	72460285	.	GTA	G	1773.63	PASS	AB=0.892;AC=15;AF=0.268;AN=56;BaseQRankSum=5.291;DP=418;FS=9.567;HRun=0;HaplotypeScore=67.2446;InbreedingCoeff=0.6402;MQ=69.39;MQ0=1;MQRankSum=0.056;QD=13.75;ReadPosRankSum=3.960;VQSLOD=2.5059;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,2:25:21:21,0,645	0/0:9,0:9:21.03:0,21,273	0/0:9,0:5:1.25:0,1,3	0/0:13,0:8:1.72:0,2,4	0/1:11,2:13:38.89:39,0,456	0/0:24,0:23:31.88:0,32,942	0/0:15,0:15:39.13:0,39,636	0/0:19,0:19:42.14:0,42,684	0/0:8,0:8:18.06:0,18,296	0/0:6,0:25:57.02:0,57,503	0/0:6,0:16:30.02:0,30,307	1/1:5,14:19:39.12:488,39,0	1/1:1,11:12:33.11:413,33,0	0/0:10,0:10:21.07:0,21,346	0/0:16,0:16:36.12:0,36,594	0/0:14,1:15:7.60:0,8,605	0/1:6,1:15:8.04:8,0,193	1/1:2,6:9:17.89:201,18,0	0/0:21,1:22:10.63:0,11,705	0/0:21,0:21:51.17:0,51,838	0/0:12,0:12:27.05:0,27,416	1/1:5,8:13:24.08:300,24,0	1/1:1,12:13:33.11:413,33,0	1/1:3,7:10:6.01:75,6,0	0/0:3,0:11:18:0,18,158	0/0:20,0:20:16.26:0,16,689	0/0:17,1:18:7.58:0,8,592	0/0:6,0:6:18.06:0,18,294
chr10	72460310	.	AACACACAC	A	438.59	PASS	AB=0.924;AC=11;AF=0.212;AN=52;BaseQRankSum=3.420;DP=449;FS=14.606;HRun=0;HaplotypeScore=122.7620;InbreedingCoeff=0.4359;MQ=54.61;MQ0=18;MQRankSum=-3.843;QD=4.22;ReadPosRankSum=-2.617;VQSLOD=1.1550;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:33.11:0,33,934	0/0:6,0:7:6.01:0,6,147	./.	./.	0/0:14,0:13:9.03:0,9,259	0/0:19,0:19:18.05:0,18,428	0/0:19,0:18:15.03:0,15,343	0/0:16,0:16:3.01:0,3,36	0/0:14,0:14:5.17:0,5,481	0/0:17,0:18:6:0,6,72	0/0:12,0:13:2.98:0,3,42	1/1:18,3:22:15.05:268,15,0	0/1:12,1:11:67.79:68,0,96	0/0:11,0:11:18.06:0,18,397	0/0:16,0:18:24.04:0,24,472	0/0:21,0:19:24.08:0,24,677	0/1:13,1:15:52.67:53,0,188	1/1:12,0:13:1.81:29,2,0	0/0:21,0:21:15.52:0,16,341	0/0:16,0:17:12.04:0,12,323	0/0:22,0:21:33.11:0,33,880	1/1:14,2:17:9.29:151,9,0	0/1:12,0:11:0:0,0,0	1/1:10,0:10:0.32:0,0,0	0/0:13,0:14:9.50:0,9,196	0/0:17,0:17:18.06:0,18,362	0/0:14,0:17:30.10:0,30,736	0/0:8,0:7:9.03:0,9,235
chr10	72460854	.	G	GTCCT	2836.52	PASS	AB=1.000;AC=22;AF=0.423;AN=52;BaseQRankSum=7.147;DP=722;FS=2.948;HRun=0;HaplotypeScore=139.7278;InbreedingCoeff=0.7914;MQ=68.06;MQ0=6;MQRankSum=-0.688;QD=9.85;ReadPosRankSum=-2.622;VQSLOD=2.9592;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:0.07:0,0,309	0/0:11,0:11:23.92:0,24,292	./.	./.	0/0:25,0:25:51.10:0,51,680	0/0:17,0:17:30.08:0,30,419	0/0:37,0:38:31.68:0,32,557	0/0:34,0:31:5.93:0,6,44	0/0:33,0:33:60.13:0,60,836	1/1:30,0:30:36.11:680,36,0	1/1:21,0:21:18.79:244,19,0	1/1:32,0:32:25.96:203,26,0	1/1:15,0:14:15.12:122,15,0	0/0:22,0:22:36.01:0,36,473	0/0:39,0:39:54.14:0,54,746	0/1:35,0:35:13.05:13,0,683	1/1:28,0:28:15.01:255,15,0	1/1:14,0:14:18.04:348,18,0	0/0:27,0:24:27.04:0,27,369	1/1:12,9:22:32.96:590,33,0	0/0:50,0:50:63.18:0,63,903	1/1:20,0:20:12.85:88,13,0	1/1:23,0:23:22.68:186,23,0	1/1:36,0:37:31.89:304,32,0	0/0:17,0:17:11.08:0,11,304	0/0:30,0:30:30.27:0,30,636	0/0:22,0:22:30.09:0,30,434	0/1:11,0:11:5.43:5,0,41
chr10	72461284	.	A	ACTTT	1017.68	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=0.494;DP=601;FS=13.639;HRun=0;HaplotypeScore=100.3885;InbreedingCoeff=0.6392;MQ=73.60;MQ0=1;MQRankSum=-4.404;QD=29.08;ReadPosRankSum=-0.003;VQSLOD=2.5520;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:22:45.15:1105,45,0	0/0:7,0:7:15.04:0,15,239	0/0:18,0:18:41.97:0,42,612	0/0:17,0:14:18.04:0,18,257	0/0:33,0:33:84.27:0,84,1432	0/0:24,0:24:66.22:0,66,1145	0/0:12,0:12:27.06:0,27,398	0/0:34,0:34:66.21:0,66,1119	0/0:23,0:23:63.19:0,63,1060	0/0:22,0:22:57.20:0,57,1015	0/0:19,0:19:45.15:0,45,775	0/0:24,0:24:63.18:0,63,1033	0/0:21,0:20:54.19:0,54,961	0/0:14,0:14:36.10:0,36,584	0/0:26,0:26:72.25:0,72,1277	0/0:19,0:19:51.16:0,51,879	0/0:25,0:25:53.83:0,54,887	0/0:15,0:15:42.12:0,42,691	0/0:33,0:32:75.21:0,75,1171	0/0:31,0:31:81.26:0,81,1381	0/0:14,0:14:36.11:0,36,612	0/0:16,0:16:33.11:0,33,562	0/0:22,0:22:63.22:0,63,1121	0/0:11,0:11:30.09:0,30,506	0/0:25,0:25:60.18:0,60,1012	0/0:34,0:34:93.29:0,93,1577	0/0:27,0:27:72.19:0,72,1168	0/1:13,0:12:18.50:19,0,468
chr10	72461339	.	A	ATG	1216.23	PASS	AB=0.749;AC=8;AF=0.143;AN=56;BaseQRankSum=-4.756;DP=578;FS=1.391;HRun=0;HaplotypeScore=84.4378;InbreedingCoeff=0.3329;MQ=59.90;MQ0=11;MQRankSum=-0.359;QD=8.45;ReadPosRankSum=-1.256;VQSLOD=2.8288;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:5.95:45,6,0	0/0:5,0:7:11.76:0,12,116	0/0:26,0:13:11.31:0,11,76	0/0:33,0:16:8.99:0,9,87	0/0:22,0:26:44.71:0,45,451	0/0:20,0:20:38.93:0,39,411	0/0:20,0:22:29.73:0,30,289	0/1:30,1:31:33.70:34,0,241	0/0:23,0:23:53.98:0,54,590	1/1:6,10:18:35.36:397,35,0	0/1:9,8:17:15.86:211,0,16	0/0:23,0:25:41.93:0,42,444	0/0:13,0:13:26.89:0,27,274	0/0:11,0:11:24.05:0,24,262	0/0:25,0:25:51.15:0,51,577	0/0:16,0:17:38.94:0,39,421	0/1:17,18:34:59.69:463,0,60	0/0:11,0:24:31.25:0,31,154	0/0:19,0:24:38.17:0,38,314	0/0:17,0:20:44.61:0,45,439	0/0:21,0:23:41.93:0,42,445	0/0:8,0:8:20.99:0,21,203	0/0:13,0:15:29.92:0,30,319	0/0:8,0:11:26.56:0,27,235	0/1:12,10:24:26.99:208,0,27	0/0:27,0:31:38.39:0,38,328	0/0:18,0:18:26.77:0,27,253	0/0:9,0:8:3.01:0,3,34
chr10	72461520	.	TA	T	1331.17	PASS	AB=0.797;AC=13;AF=0.232;AN=56;BaseQRankSum=4.086;DP=443;FS=0.473;HRun=14;HaplotypeScore=57.8672;InbreedingCoeff=0.4068;MQ=80.47;MQ0=2;MQRankSum=0.154;QD=7.88;ReadPosRankSum=2.377;VQSLOD=2.5596;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:56.50:390,57,0	0/0:5,0:5:6:0,6,52	0/1:20,0:18:27.35:27,0,50	0/0:12,0:11:6.25:0,6,32	0/1:18,4:24:37.63:38,0,227	0/0:9,0:9:17.82:0,18,153	0/0:12,0:12:26.92:0,27,227	0/0:27,1:28:12.68:0,13,239	0/0:13,2:16:1.15:0,1,276	1/1:4,14:18:40.69:271,41,0	0/1:4,2:7:18.42:18,0,20	0/0:12,2:13:0.43:0,0,142	0/0:13,0:15:32.86:0,33,289	0/0:12,0:13:11.19:0,11,121	0/0:14,3:18:29.87:0,30,265	0/0:18,0:19:12.38:0,12,241	1/1:4,24:27:56.47:390,56,0	0/1:4,7:11:7.60:102,0,8	0/1:12,4:17:40.35:40,0,219	0/0:13,0:15:20.78:0,21,165	0/0:14,0:15:22.92:0,23,193	0/0:9,0:9:13.82:0,14,113	0/0:8,0:8:12:0,12,108	0/0:13,0:15:25.85:0,26,226	1/1:2,13:15:32.69:226,33,0	0/0:20,1:22:30.19:0,30,393	0/0:13,0:16:23.66:0,24,185	0/0:10,0:12:23.59:0,24,180
chr10	72461658	.	AAAAT	A	462.27	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.479;DP=432;FS=1.537;HRun=0;HaplotypeScore=85.7075;InbreedingCoeff=0.8849;MQ=57.47;MQ0=6;MQRankSum=0.375;QD=7.84;ReadPosRankSum=0.955;VQSLOD=2.4358;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:48.05:0,48,593	0/0:6,0:6:18.03:0,18,337	0/0:13,0:5:12.82:0,13,133	0/0:13,0:8:8.14:0,8,195	0/0:22,0:22:51.11:0,51,852	0/0:6,0:6:12.03:0,12,189	0/0:16,0:16:42.10:0,42,817	0/0:32,0:29:81.17:0,81,1209	0/0:8,0:8:21.03:0,21,387	0/0:14,0:14:5.24:0,5,89	0/0:19,0:18:10.43:0,10,95	1/1:9,0:8:8.98:93,9,0	1/1:14,0:13:8.81:78,9,0	0/0:13,0:13:30.04:0,30,506	0/0:12,0:12:27.06:0,27,481	0/0:17,0:17:39.06:0,39,756	0/0:20,0:19:28.26:0,28,130	0/0:17,0:16:29.96:0,30,357	0/0:16,0:15:38.90:0,39,629	0/0:22,0:22:45.07:0,45,772	0/0:18,0:18:23.65:0,24,551	1/1:8,0:8:13.25:88,13,0	1/1:12,1:12:14.27:103,14,0	1/1:12,3:14:23.72:263,24,0	0/0:15,0:15:20.82:0,21,104	0/0:26,0:26:60.11:0,60,1043	0/0:13,0:13:30.05:0,30,443	0/0:5,0:5:12.04:0,12,238
chr10	72461659	.	AAAT	A	1107.94	PASS	AB=0.977;AC=13;AF=0.232;AN=56;BaseQRankSum=7.477;DP=435;FS=2.868;HRun=0;HaplotypeScore=76.1876;InbreedingCoeff=0.4859;MQ=57.69;MQ0=5;MQRankSum=-1.698;QD=8.52;ReadPosRankSum=2.975;VQSLOD=2.8081;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:47.22:0,47,430	0/0:6,0:6:17.93:0,18,263	0/0:13,0:5:14.14:0,14,121	0/0:13,0:8:16.36:0,16,179	0/0:23,0:23:39.23:0,39,739	0/0:6,0:6:14.93:0,15,168	0/0:16,0:16:42.02:0,42,665	0/0:31,0:29:83.84:0,84,1015	0/0:8,0:8:17.21:0,17,309	0/1:13,1:14:36.82:150,0,37	0/1:18,1:18:39.24:88,0,39	0/1:10,0:9:0.10:100,0,0	1/1:5,9:13:10.27:119,10,0	0/0:13,0:13:32.96:0,33,458	0/0:13,0:13:32.92:0,33,433	0/0:17,0:17:43.95:0,44,631	0/1:22,0:21:63.21:63,0,71	0/0:17,0:16:20.27:0,20,257	0/0:16,0:15:41.68:0,42,529	0/0:22,0:22:49.25:0,49,698	0/0:17,0:18:19.65:0,20,458	1/1:1,7:8:19.22:177,19,0	1/1:4,9:12:2.10:159,2,0	1/1:13,2:15:38.41:365,38,0	0/1:15,0:15:49:53,0,49	0/0:26,0:26:63.20:0,63,892	0/0:12,0:12:29.98:0,30,397	0/0:5,0:5:11.97:0,12,190
chr10	72462656	.	T	TCATA	5486.06	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.105;DP=616;FS=3.213;HRun=0;HaplotypeScore=108.1444;InbreedingCoeff=0.9233;MQ=60.66;MQ0=6;MQRankSum=1.870;QD=35.62;ReadPosRankSum=1.805;VQSLOD=4.7897;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,11:34:48.13:963,48,0	0/0:7,0:7:9.02:0,9,119	0/0:20,0:6:1.73:0,2,45	0/0:12,0:5:5.85:0,6,48	0/0:32,0:32:78.25:0,78,1220	0/0:16,0:16:36.09:0,36,547	0/0:13,0:13:18.04:0,18,262	0/0:37,0:37:54.15:0,54,765	0/0:20,0:20:45.15:0,45,719	1/1:26,0:26:62.66:1026,63,0	1/1:24,0:24:60.21:1110,60,0	0/0:15,0:15:39.11:0,39,580	0/0:25,0:25:42.09:0,42,590	0/0:15,0:15:39.13:0,39,626	0/0:39,0:39:84.29:0,84,1327	0/0:20,0:20:48.16:0,48,778	1/1:25,0:25:45.14:804,45,0	1/1:8,8:15:48.14:999,48,0	0/0:16,0:15:21.04:0,21,289	0/0:36,0:36:81.26:0,81,1240	0/0:17,0:17:39.13:0,39,616	0/0:11,0:11:21.07:0,21,338	0/0:16,0:16:29.82:0,30,450	0/0:20,0:20:36.09:0,36,522	1/1:29,0:29:29.76:584,30,0	0/0:36,0:37:29.20:0,29,1337	0/0:23,0:23:57.18:0,57,875	0/0:15,0:15:30.10:0,30,483
chr10	72462681	.	C	CATAT	6646.58	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-1.650;DP=759;FS=3.449;HRun=0;HaplotypeScore=133.0542;InbreedingCoeff=0.8420;MQ=55.09;MQ0=18;MQRankSum=4.497;QD=42.07;ReadPosRankSum=2.337;VQSLOD=5.4776;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:36:99:512,0,100	0/0:7,0:7:16.26:0,16,196	0/0:52,0:7:14.06:0,14,143	0/0:48,0:11:23.85:0,24,207	0/0:40,0:40:99:0,111,1773	0/0:20,0:19:52.61:0,53,799	0/0:22,0:22:53.51:0,54,635	0/0:32,0:32:96.15:0,96,1383	0/0:25,0:25:69.05:0,69,1078	1/1:5,20:27:80.62:1606,81,0	1/1:14,14:28:75.17:1727,75,0	0/0:23,0:23:63.10:0,63,950	0/0:23,0:23:54.08:0,54,843	0/0:21,0:21:59.69:0,60,928	0/0:40,0:40:99:0,108,1855	0/0:27,0:27:78.09:0,78,1195	1/1:13,13:26:71.95:1359,72,0	1/1:19,0:18:3.55:583,4,0	0/0:20,0:18:47.21:0,47,553	0/0:36,0:36:99:0,102,1731	0/0:32,0:32:69.05:0,69,1008	0/0:16,0:16:36.04:0,36,537	0/0:16,0:16:41.80:0,42,655	0/0:22,0:22:63.05:0,63,903	1/1:2,20:22:32.54:860,33,0	0/0:38,1:39:31.28:0,31,1856	0/0:23,0:23:66.15:0,66,1154	0/0:17,0:17:45.06:0,45,713
chr10	72462712	.	ATGTG	A	3187.88	PASS	AB=0.682;AC=14;AF=0.250;AN=56;BaseQRankSum=5.064;DP=832;FS=3.521;HRun=0;HaplotypeScore=154.3158;InbreedingCoeff=0.4115;MQ=54.43;MQ0=23;MQRankSum=0.618;QD=12.21;ReadPosRankSum=0.907;VQSLOD=3.2406;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:31:36.12:0,36,726	0/0:10,0:10:10.09:0,10,426	0/0:54,0:7:6.49:0,6,146	0/0:71,0:15:3.01:0,3,44	0/0:34,0:39:71.43:0,71,1456	0/0:20,0:20:38.80:0,39,763	0/0:23,0:25:57.46:0,57,1128	0/0:28,0:30:47.24:0,47,939	0/0:21,0:27:25.41:0,25,946	0/1:18,2:30:99:101,0,159	0/1:12,1:27:9.38:9,0,133	1/1:8,21:30:48:779,48,0	1/1:7,19:27:48.16:777,48,0	0/0:22,0:22:45.02:0,45,815	0/0:36,1:42:29.08:0,29,1571	0/0:20,0:26:43.83:0,44,779	0/1:12,2:32:36.10:36,0,111	0/1:6,2:16:60.78:61,0,119	0/0:14,0:10:15.05:0,15,344	0/0:35,1:37:20.59:0,21,1487	0/0:43,1:48:44.19:0,44,1875	1/1:4,14:19:30.10:486,30,0	1/1:7,9:17:21.05:341,21,0	0/1:10,17:27:39.43:769,0,39	0/0:15,0:18:19.45:0,19,157	0/1:31,3:34:2.75:3,0,834	0/0:29,1:30:15.56:0,16,1295	0/0:15,0:22:47.08:0,47,842
chr10	72463878	.	A	AT	860.48	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.725;DP=604;FS=2.225;HRun=10;HaplotypeScore=57.8466;InbreedingCoeff=0.9568;MQ=68.98;MQ0=1;MQRankSum=-1.448;QD=17.93;ReadPosRankSum=1.415;VQSLOD=4.4023;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,28:34:39.74:630,40,0	0/0:10,0:10:29.95:0,30,243	0/0:9,0:9:8.46:0,8,90	0/0:16,0:15:23.32:0,23,177	0/0:31,0:33:75.97:0,76,603	0/0:20,0:20:50.93:0,51,419	0/0:18,0:18:38.95:0,39,320	0/0:41,0:41:86.80:0,87,710	0/0:15,0:16:34.99:0,35,277	0/0:33,0:34:73.91:0,74,597	0/0:18,0:18:47.94:0,48,394	0/0:17,0:17:47.94:0,48,394	0/0:21,0:21:47.90:0,48,394	0/0:16,0:16:32.93:0,33,271	0/0:23,0:23:56.89:0,57,468	0/0:17,0:17:45.40:0,45,368	0/0:23,0:23:33.62:0,34,420	1/1:1,13:14:33.08:352,33,0	0/0:13,0:13:29.95:0,30,246	0/0:18,0:18:38.91:0,39,320	0/0:20,0:21:52.95:0,53,425	0/0:14,0:15:34.96:0,35,277	0/0:16,0:16:41.93:0,42,345	0/0:48,0:48:99:0,132,1083	0/0:15,3:18:15.96:0,16,338	0/0:29,0:29:74.88:0,75,613	0/0:31,0:31:86.89:0,87,714	0/0:14,0:14:20.94:0,21,172
chr10	72464559	.	C	CTT	530.22	PASS	AB=0.767;AC=13;AF=0.232;AN=56;BaseQRankSum=3.778;DP=558;FS=3.993;HRun=15;HaplotypeScore=94.3019;InbreedingCoeff=0.1904;MQ=80.03;MQ0=6;MQRankSum=-0.278;QD=2.85;ReadPosRankSum=-2.213;VQSLOD=-0.4127;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,4:32:6.98:179,7,0	0/1:5,0:6:0.36:0,0,37	0/0:46,0:26:4.60:0,5,111	0/0:27,0:19:5.59:0,6,44	0/0:19,0:22:19.94:0,20,302	0/0:21,0:21:38.51:0,39,308	0/0:21,0:21:20.04:0,20,165	0/0:27,0:31:28.37:0,28,241	0/0:17,0:19:26.48:0,26,249	0/1:6,0:11:9.85:51,0,10	0/1:11,1:24:42.33:56,0,42	0/0:17,0:18:22.58:0,23,226	0/0:16,0:22:25.91:0,26,224	0/0:14,0:15:13.95:0,14,106	0/0:19,0:21:33.33:0,33,277	0/0:19,0:20:12.72:0,13,226	0/1:5,2:24:14.25:83,0,14	1/1:3,4:8:13.44:129,13,0	0/1:16,0:21:10.40:10,0,137	0/1:13,1:17:27:27,0,125	0/0:8,0:9:14.60:0,15,106	0/0:10,0:12:0.93:0,1,131	0/0:11,0:12:14.43:0,14,106	0/1:16,0:17:8.58:9,0,108	1/1:10,7:26:0.20:133,0,0	0/0:15,0:18:15.17:0,15,173	0/0:20,0:24:21.09:0,21,308	0/0:11,0:13:20.37:0,20,193
chr10	72466529	.	AGTGG	A	2624.03	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.510;DP=644;FS=0.547;HRun=0;HaplotypeScore=105.1323;InbreedingCoeff=0.9667;MQ=81.30;MQ0=0;MQRankSum=-5.311;QD=48.59;ReadPosRankSum=2.640;VQSLOD=4.6142;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:90.78:1703,91,0	0/0:3,0:3:9.03:0,9,247	0/0:20,0:20:57.18:0,57,1358	0/0:16,0:16:37.67:0,38,963	0/0:29,0:29:78.26:0,78,2130	0/0:29,0:29:87.30:0,87,2347	0/0:22,0:22:60.21:0,60,1643	0/0:24,0:24:72.22:0,72,1794	0/0:28,0:28:81.25:0,81,2103	0/0:32,0:32:96.32:0,96,2551	0/0:27,0:27:81.28:0,81,2218	0/0:28,0:28:84.29:0,84,2285	0/0:20,0:20:54.17:0,54,1400	0/0:15,0:15:42.14:0,42,1109	0/0:31,0:31:93.29:0,93,2369	0/0:25,0:25:75.24:0,75,1938	0/0:21,0:21:63.20:0,63,1646	1/1:0,19:19:54.19:1042,54,0	0/0:32,0:32:93.30:0,93,2359	0/0:32,0:32:93.30:0,93,2423	0/0:18,0:18:51.17:0,51,1348	0/0:27,0:27:81.27:0,81,2154	0/0:21,0:21:63.21:0,63,1664	0/0:15,0:15:45.14:0,45,1167	0/0:11,0:11:33.11:0,33,866	0/0:17,0:17:51.17:0,51,1334	0/0:41,0:40:99:0,120,3239	0/0:6,0:6:18.06:0,18,493
chr10	72469869	.	GGTGT	G	593.13	PASS	AB=0.972;AC=14;AF=0.280;AN=50;BaseQRankSum=3.856;DP=580;FS=3.260;HRun=0;HaplotypeScore=106.9883;InbreedingCoeff=0.5596;MQ=54.00;MQ0=23;MQRankSum=-1.263;QD=3.19;ReadPosRankSum=-0.626;VQSLOD=2.1587;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:30:8.98:77,9,0	0/0:12,0:12:15.03:0,15,266	./.	./.	0/0:19,0:19:8.82:0,9,119	0/0:20,0:20:24.08:0,24,524	0/0:28,0:31:8.77:0,9,153	0/0:27,0:26:3.01:0,3,39	1/1:14,4:19:12.03:167,12,0	1/1:13,2:13:11.95:155,12,0	1/1:19,4:22:9.03:138,9,0	0/0:21,0:23:24.07:0,24,375	0/0:12,0:14:3.01:0,3,52	0/0:15,0:15:24.07:0,24,354	0/0:24,0:25:17.77:0,18,272	0/0:23,0:23:17.70:0,18,312	1/1:19,1:24:9.01:102,9,0	1/1:17,0:17:6.01:56,6,0	0/0:16,0:15:8.99:0,9,117	0/1:20,0:20:17.53:42,0,18	0/1:32,1:31:20.06:20,0,256	0/0:11,0:13:3.01:0,3,52	0/0:13,0:13:3.01:0,3,50	0/0:33,0:35:48.16:0,48,905	./.	0/0:26,0:26:12.24:0,12,125	0/0:7,0:7:6.02:0,6,136	0/0:12,0:12:11.95:0,12,167
chr10	72470272	.	T	TTG	2802.39	PASS	AB=0.803;AC=17;AF=0.327;AN=52;BaseQRankSum=3.498;DP=659;FS=2.331;HRun=0;HaplotypeScore=103.1816;InbreedingCoeff=0.3454;MQ=64.60;MQ0=8;MQRankSum=0.300;QD=9.70;ReadPosRankSum=0.283;VQSLOD=3.3257;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,23:52:3.63:339,0,4	0/0:10,0:13:14.80:0,15,121	./.	./.	0/0:16,0:16:20.99:0,21,210	0/0:10,0:12:17.88:0,18,179	0/0:23,0:25:29.80:0,30,277	0/0:27,0:25:5.01:0,5,34	0/0:12,0:12:19.70:0,20,185	1/1:17,3:20:4.50:214,4,0	1/1:10,5:15:18.04:241,18,0	0/1:23,6:29:22.79:360,0,23	1/1:25,3:28:15.24:365,15,0	0/0:19,0:21:47.45:0,47,416	0/0:34,0:35:41.83:0,42,406	0/0:26,0:30:56.53:0,57,527	0/1:22,7:29:93.28:307,0,93	1/1:11,4:15:0.68:165,1,0	0/0:17,0:16:5.68:0,6,28	0/0:19,0:21:10.86:0,11,263	0/0:40,0:41:53.72:0,54,491	0/1:9,4:13:32.02:36,0,32	0/1:8,2:10:2.01:40,0,2	0/1:33,15:48:0.10:836,0,0	1/1:8,2:11:3.01:45,3,0	0/1:18,1:19:14.37:14,0,245	0/0:18,0:20:29.64:0,30,264	0/0:5,0:5:5.99:0,6,57
chr10	72470309	.	TGC	T	1319.07	PASS	AB=0.990;AC=14;AF=0.250;AN=56;BaseQRankSum=-0.693;DP=565;FS=0.000;HRun=0;HaplotypeScore=91.2481;InbreedingCoeff=-0.1514;MQ=62.92;MQ0=9;MQRankSum=0.134;QD=5.17;ReadPosRankSum=-3.793;VQSLOD=1.3957;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:47,1:48:50.16:283,0,50	0/0:14,0:14:23.59:0,24,225	0/1:12,0:6:3.06:3,0,11	0/1:8,0:5:6.43:20,0,6	0/0:14,0:14:26.84:0,27,385	0/0:22,0:22:50.80:0,51,557	0/0:22,0:21:49.69:0,50,526	0/0:26,0:25:63.22:0,63,537	0/0:15,0:14:32.83:0,33,347	0/1:19,0:18:30.46:155,0,30	0/0:9,0:9:6.87:0,7,31	0/1:28,0:28:87.10:197,0,87	0/1:16,1:17:68.75:83,0,69	0/0:22,0:21:30.02:0,30,503	0/0:21,2:23:4.27:0,4,622	0/0:41,0:39:46.99:0,47,1013	0/1:25,0:25:98.57:99,0,143	0/1:9,0:9:9.67:76,0,10	0/1:13,0:12:1.88:2,0,177	0/0:16,0:16:21.35:0,21,411	0/0:36,0:36:82.60:0,83,904	0/1:9,0:9:16.40:39,0,16	0/1:8,0:8:19.02:99,0,19	0/1:47,2:49:99:372,0,106	1/1:10,0:10:1.07:37,1,0	0/0:24,0:24:55.49:0,55,570	0/0:22,0:21:46.53:0,47,548	0/0:4,0:4:6.01:0,6,105
chr10	72470655	.	T	TTTTTG	2949.62	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.889;DP=462;FS=3.368;HRun=0;HaplotypeScore=79.7843;InbreedingCoeff=0.9683;MQ=69.41;MQ0=2;MQRankSum=0.510;QD=46.09;ReadPosRankSum=0.938;VQSLOD=3.6114;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:60.20:0,60,1097	0/0:11,0:11:24.08:0,24,452	0/0:18,0:15:21.07:0,21,332	0/0:18,0:14:11.91:0,12,197	0/0:12,0:12:30.10:0,30,511	0/0:15,0:15:33.11:0,33,608	0/0:14,0:14:33.10:0,33,512	0/0:28,0:28:33.11:0,33,551	0/0:16,0:16:33.11:0,33,590	1/1:6,10:15:30.09:766,30,0	1/1:2,8:11:21.07:607,21,0	0/0:18,0:18:48.15:0,48,870	0/0:15,0:15:42.14:0,42,792	0/0:13,0:13:27.09:0,27,476	0/0:18,0:18:45.14:0,45,813	0/0:25,0:25:63.22:0,63,1189	1/1:2,25:28:42.14:1215,42,0	0/0:24,0:24:51.08:0,51,837	0/0:15,0:15:27.07:0,27,443	0/0:12,0:12:33.11:0,33,624	0/0:17,0:17:36.12:0,36,647	0/0:12,0:12:27.09:0,27,487	0/0:12,0:12:24.08:0,24,438	0/0:16,0:16:42.14:0,42,793	1/1:2,7:9:18.06:521,18,0	0/0:19,0:19:42.14:0,42,739	0/0:19,0:19:48.16:0,48,858	0/0:4,0:4:9.03:0,9,153
chr10	72470799	.	GA	G	1036.10	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=7.846;DP=313;FS=3.214;HRun=7;HaplotypeScore=37.3554;InbreedingCoeff=0.8105;MQ=76.89;MQ0=0;MQRankSum=-1.976;QD=17.86;ReadPosRankSum=1.718;VQSLOD=2.9752;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.15:0,51,628	0/0:1,0:1:3.01:0,3,38	0/0:10,0:10:6.11:0,6,148	0/1:9,0:7:3.86:4,0,85	0/0:13,0:13:33.09:0,33,402	0/0:12,0:12:24.08:0,24,302	0/0:11,0:11:27.09:0,27,335	0/0:22,0:22:60.18:0,60,742	0/0:9,0:9:27.06:0,27,314	1/1:1,9:10:27.06:275,27,0	1/1:2,11:13:33.07:336,33,0	0/0:11,0:11:30.10:0,30,376	0/0:6,0:6:15.05:0,15,189	0/0:8,0:8:18.06:0,18,227	0/0:9,0:9:24.08:0,24,301	0/0:15,0:15:42.13:0,42,528	1/1:5,12:16:33.06:336,33,0	0/0:13,0:13:39.10:0,39,474	0/0:19,0:19:54.17:0,54,679	0/0:13,0:13:36.11:0,36,441	0/0:12,0:12:33.11:0,33,415	0/0:3,0:3:9.03:0,9,113	0/0:7,0:7:18.06:0,18,226	0/0:5,0:5:12.04:0,12,151	1/1:1,8:9:24.05:244,24,0	0/0:13,0:13:33.10:0,33,404	0/0:11,0:11:30.10:0,30,377	0/0:15,0:15:45.14:0,45,566
chr10	72470828	.	C	CT	797.60	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.943;DP=320;FS=2.205;HRun=12;HaplotypeScore=46.7811;InbreedingCoeff=0.8102;MQ=68.91;MQ0=1;MQRankSum=-5.360;QD=13.99;ReadPosRankSum=-0.889;VQSLOD=3.5395;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:50.45:0,50,361	0/0:2,0:2:5.97:0,6,44	0/0:17,0:11:11.13:0,11,63	0/0:10,0:5:8.76:0,9,57	0/0:16,0:16:35.76:0,36,261	0/0:14,0:14:32.71:0,33,233	0/0:6,0:6:8.94:0,9,66	0/0:29,0:31:75.54:0,76,528	0/0:6,0:6:17.90:0,18,131	1/1:4,9:13:24.02:222,24,0	1/1:6,4:10:21.01:190,21,0	0/0:11,0:11:29.79:0,30,217	0/0:5,0:5:14.91:0,15,109	0/0:6,0:6:14.81:0,15,103	0/0:8,0:8:11.98:0,12,105	0/0:11,0:11:23.81:0,24,174	1/1:8,13:20:18.87:313,19,0	0/0:15,0:15:16.69:0,17,224	0/0:23,0:25:58.64:0,59,417	0/0:11,0:12:25.85:0,26,176	0/0:8,0:8:20.88:0,21,153	0/0:3,0:3:5.96:0,6,44	0/0:3,0:3:5.96:0,6,44	0/0:5,0:5:2.93:0,3,22	1/1:6,7:13:24.03:229,24,0	0/0:7,0:6:14.87:0,15,108	0/0:7,0:7:20.88:0,21,153	0/0:17,0:17:32.73:0,33,241
chr10	72474115	.	AAGAGCGCCCGACTGCTCTTCC	A	1989.01	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=5.928;DP=344;FS=1.131;HRun=0;HaplotypeScore=153.4654;InbreedingCoeff=0.7980;MQ=41.22;MQ0=55;MQRankSum=-4.800;QD=66.30;ReadPosRankSum=1.903;VQSLOD=3.3556;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:33:86.91:0,87,7628	./.	0/0:4,0:2:6.01:0,6,59	0/0:6,0:4:6.02:0,6,82	0/0:11,0:11:33.11:0,33,2221	0/0:17,0:17:39.13:0,39,3258	0/0:11,0:11:33.11:0,33,2597	0/0:24,0:10:27.09:0,27,1608	0/0:11,0:10:21.07:0,21,1934	0/0:8,0:6:18.06:0,18,1457	0/0:7,0:6:15.05:0,15,990	1/1:0,3:2:3.01:175,3,0	1/1:3,6:9:12.04:699,12,0	0/0:4,0:4:12.04:0,12,1027	0/0:8,0:8:18.06:0,18,1720	0/0:15,0:11:30.10:0,30,2558	0/0:33,0:26:63.22:0,63,5640	0/0:19,0:14:33.11:0,33,2954	0/0:22,0:19:42.09:0,42,3063	0/0:14,0:14:36.11:0,36,2890	0/0:25,0:15:36.12:0,36,3130	1/1:0,5:5:15.05:874,15,0	1/1:3,3:3:6.02:213,6,0	1/1:5,2:4:3.01:175,3,0	0/0:4,0:4:12.04:0,12,1059	0/0:13,0:12:36.12:0,36,3280	0/0:4,0:4:12.04:0,12,1115	0/0:14,0:14:39.13:0,39,3485
chr10	72474214	.	GTA	G	1574.14	PASS	AB=0.854;AC=8;AF=0.154;AN=52;BaseQRankSum=5.421;DP=415;FS=4.086;HRun=0;HaplotypeScore=45.0651;InbreedingCoeff=0.7910;MQ=33.10;MQ0=96;MQRankSum=-0.738;QD=21.27;ReadPosRankSum=2.505;VQSLOD=3.3741;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:20:39.13:0,39,713	0/0:2,0:1:3.01:0,3,55	./.	./.	0/0:18,0:15:24.08:0,24,439	0/0:24,0:21:45.15:0,45,824	0/0:6,0:5:11.99:0,12,183	0/0:41,0:27:75.21:0,75,1338	0/0:11,0:11:30.10:0,30,548	1/1:3,15:15:42.14:601,42,0	1/1:0,12:12:30.10:429,30,0	0/0:13,0:10:12.04:0,12,219	0/0:9,0:6:12.04:0,12,220	0/0:10,0:10:27.09:0,27,477	0/0:9,0:9:15.04:0,15,246	0/0:22,0:18:39:0,39,703	0/1:17,12:12:0.31:429,0,0	0/0:22,0:12:21.07:0,21,368	0/0:24,0:14:42.14:0,42,758	0/0:14,0:13:33.11:0,33,603	0/0:21,0:9:27.09:0,27,494	0/0:6,0:6:9.03:0,9,164	0/0:6,0:6:15.05:0,15,274	0/1:7,0:3:0:0,0,0	1/1:0,8:8:18.06:258,18,0	0/0:18,0:14:42.14:0,42,740	0/0:26,0:22:48.16:0,48,878	0/0:12,0:8:21.07:0,21,385
chr10	72476337	.	GCTCTCTCTCTCTCTCTCTCT	G	143.72	PASS	AB=0.810;AC=4;AF=0.071;AN=56;BaseQRankSum=2.328;DP=367;FS=1.679;HRun=0;HaplotypeScore=169.8731;InbreedingCoeff=0.2514;MQ=73.22;MQ0=6;MQRankSum=-1.056;QD=2.82;ReadPosRankSum=0.515;VQSLOD=2.9575;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,11:22:6.64:73,0,7	0/0:4,0:4:12.04:0,12,654	0/0:21,0:17:13.60:0,14,391	0/0:26,0:15:13.88:0,14,546	0/0:6,0:6:9:0,9,124	0/0:18,0:20:42.09:0,42,1442	0/0:13,0:13:33.11:0,33,1575	0/0:40,0:39:69.23:0,69,2267	0/0:8,0:8:15.05:0,15,689	0/0:5,0:5:6.02:0,6,218	0/0:4,0:4:3.01:0,3,51	0/0:9,0:12:30.10:0,30,1456	0/0:8,0:8:15.05:0,15,1049	0/0:8,0:11:12.04:0,12,568	0/0:11,0:12:27.92:0,28,1170	0/0:9,0:9:21.07:0,21,974	0/0:13,0:13:27.01:0,27,563	1/1:5,4:9:3.01:155,3,0	0/0:14,0:14:18.05:0,18,293	0/0:5,0:5:12.04:0,12,831	0/1:19,0:20:17.52:18,0,1243	0/0:7,0:7:8.98:0,9,247	0/0:12,0:12:12.03:0,12,456	0/0:10,0:20:28.34:0,28,1334	0/0:2,0:2:5.97:0,6,110	0/0:15,0:17:39.13:0,39,2171	0/0:20,0:19:36.11:0,36,1899	0/0:5,0:5:12.04:0,12,562
chr10	72476404	.	CCA	C	49.29	PASS	AB=0.993;AC=7;AF=0.130;AN=54;BaseQRankSum=4.821;DP=463;FS=2.608;HRun=0;HaplotypeScore=65.3593;InbreedingCoeff=0.4044;MQ=57.02;MQ0=20;MQRankSum=-0.310;QD=0.35;ReadPosRankSum=-1.457;VQSLOD=1.1067;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:28.29:0,28,569	0/0:3,0:3:9.03:0,9,155	0/0:85,1:22:19.38:0,19,455	0/1:98,2:23:15.83:16,0,471	0/0:11,0:11:6.39:0,6,570	0/1:17,0:17:2.49:2,0,704	0/0:14,0:14:36.17:0,36,573	0/0:18,0:18:48.16:0,48,891	0/0:13,0:13:36.12:0,36,688	1/1:2,1:3:9.02:117,9,0	0/0:0,3:3:0:0,0,0	0/0:10,0:10:22.95:0,23,325	0/0:9,0:9:24.01:0,24,418	0/0:11,0:11:27.09:0,27,468	0/0:18,0:18:46.04:0,46,856	0/0:12,0:10:32.84:0,33,548	1/1:9,0:9:1.05:21,1,0	0/0:6,0:6:12.51:0,13,223	0/0:6,0:6:18.06:0,18,327	0/0:9,0:9:24.08:0,24,404	0/0:22,0:21:9.33:0,9,791	0/0:5,0:5:12.04:0,12,232	0/0:7,0:7:15.05:0,15,293	0/0:16,0:16:33.01:0,33,567	./.	0/1:12,0:12:3.28:3,0,524	0/0:13,0:13:39.12:0,39,639	0/0:7,0:7:21.07:0,21,403
chr10	72476462	.	T	TCCTC	540.95	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.369;DP=280;FS=7.546;HRun=0;HaplotypeScore=41.7926;InbreedingCoeff=0.7418;MQ=54.66;MQ0=13;MQRankSum=1.838;QD=22.54;ReadPosRankSum=-1.884;VQSLOD=1.1759;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:58.37:0,58,911	0/0:1,0:1:3.01:0,3,55	0/0:25,0:10:20.92:0,21,298	0/0:30,0:12:16.90:0,17,314	0/0:6,0:6:15.01:0,15,207	0/0:5,0:5:15.05:0,15,269	0/0:9,0:9:27.06:0,27,392	0/0:22,0:21:54.13:0,54,804	0/0:7,0:7:17.99:0,18,279	1/1:2,6:9:21.06:386,21,0	1/1:1,0:1:2.96:19,3,0	0/0:6,0:6:12.04:0,12,215	0/0:1,0:1:3.01:0,3,55	0/0:10,0:10:27.09:0,27,490	0/0:12,0:12:36.07:0,36,516	0/0:5,0:5:12.04:0,12,204	1/1:0,8:8:3.01:75,3,0	0/0:12,0:11:24.06:0,24,379	0/0:6,0:4:12.02:0,12,161	0/0:5,0:5:12.04:0,12,215	0/0:27,0:25:63.05:0,63,935	0/0:5,0:5:15.05:0,15,263	0/0:6,0:6:18.02:0,18,289	0/0:6,0:6:12.04:0,12,205	1/1:6,0:6:15.03:199,15,0	0/0:8,0:8:21.06:0,21,325	0/0:14,0:14:42.08:0,42,641	0/0:6,0:6:18.06:0,18,298
chr10	72476636	.	AATATAAATAT	A	338.75	PASS	AC=4;AF=0.111;AN=36;BaseQRankSum=1.090;DP=113;FS=1.454;HRun=0;HaplotypeScore=47.2197;InbreedingCoeff=0.4362;MQ=85.89;MQ0=2;MQRankSum=-0.638;QD=18.82;ReadPosRankSum=0.638;VQSLOD=1.8696;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:11.97:95,12,0	./.	0/0:7,0:6:4.93:0,5,31	0/0:18,0:7:3.45:0,3,22	./.	0/0:2,0:2:5.68:0,6,38	./.	0/0:18,0:18:42.98:0,43,971	0/0:1,0:1:3:0,3,27	0/0:4,0:4:9.03:0,9,275	0/0:2,0:2:3.01:0,3,117	./.	./.	0/0:5,0:5:6.01:0,6,184	0/0:4,0:4:9.02:0,9,311	./.	0/0:13,0:13:30.04:0,30,909	1/1:2,8:12:12.04:346,12,0	0/0:3,0:3:6.01:0,6,57	./.	0/0:4,0:4:9:0,9,78	./.	0/0:2,0:2:6:0,6,54	./.	0/0:5,0:5:15.04:0,15,419	0/0:1,0:1:3.01:0,3,97	./.	0/0:3,0:2:3.44:0,3,21
chr10	72476664	.	T	TA	547.44	PASS	AC=8;AF=0.235;AN=34;BaseQRankSum=4.374;DP=98;FS=4.498;HRun=1;HaplotypeScore=22.7080;InbreedingCoeff=0.5608;MQ=63.93;MQ0=2;MQRankSum=-0.634;QD=24.88;ReadPosRankSum=4.232;VQSLOD=3.5771;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:1:2.99:0,3,23	./.	0/0:4,0:2:3.22:0,3,14	./.	./.	./.	0/0:1,0:1:3.01:0,3,38	0/0:14,0:14:41.92:0,42,484	./.	1/1:0,5:4:12.04:175,12,0	1/1:0,1:1:3.01:45,3,0	./.	0/0:2,0:2:6.02:0,6,76	0/0:1,0:1:3.01:0,3,39	0/0:2,0:2:6.02:0,6,77	0/0:1,0:1:3:0,3,25	1/1:1,10:11:21.07:314,21,0	0/0:21,0:21:42.01:0,42,465	0/0:2,0:2:6.02:0,6,77	./.	./.	./.	./.	./.	1/1:1,4:5:9.03:135,9,0	0/0:2,0:2:5.91:0,6,54	0/0:3,0:3:9.03:0,9,114	0/0:6,0:4:12.04:0,12,152
chr10	72477083	.	AAC	A	132	PASS	AB=0.933;AC=5;AF=0.096;AN=52;BaseQRankSum=2.524;DP=418;FS=0.000;HRun=0;HaplotypeScore=61.9339;InbreedingCoeff=0.2889;MQ=62.03;MQ0=10;MQRankSum=1.628;QD=2.10;ReadPosRankSum=-0.114;VQSLOD=1.1543;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,6:18:18.05:201,18,0	0/0:6,0:6:6.02:0,6,91	./.	0/0:33,0:20:3.01:0,3,46	0/0:14,0:14:15.05:0,15,224	0/0:17,0:17:30.10:0,30,448	0/0:19,0:19:27.04:0,27,345	0/0:24,0:24:25.33:0,25,363	0/0:18,0:18:8.59:0,9,511	0/0:11,0:11:29.76:0,30,250	0/0:12,0:11:9:0,9,93	0/1:9,0:9:0:0,0,0	0/0:15,0:15:6.02:0,6,78	0/0:16,0:16:24.08:0,24,364	0/1:18,2:20:30.90:31,0,419	0/1:14,2:16:0.42:0,0,401	0/0:17,0:20:10.33:0,10,85	0/0:7,0:10:14.99:0,15,149	0/0:8,0:8:8.99:0,9,111	0/0:6,0:7:12.02:0,12,141	0/0:27,0:26:4.92:0,5,370	./.	0/0:9,0:9:2.68:0,3,12	0/0:10,0:9:2.81:0,3,42	0/0:14,0:17:6:0,6,52	0/0:11,0:11:18.06:0,18,272	0/0:11,0:11:24.08:0,24,364	0/0:10,0:10:18.04:0,18,251
chr10	72478762	.	C	CTGTG	658.45	PASS	AB=0.813;AC=10;AF=0.179;AN=56;BaseQRankSum=4.450;DP=533;FS=6.845;HRun=0;HaplotypeScore=106.6700;InbreedingCoeff=0.7401;MQ=71.59;MQ0=7;MQRankSum=-1.949;QD=6.21;ReadPosRankSum=-0.948;VQSLOD=1.8168;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:0.04:0,0,0	0/0:12,0:12:30.10:0,30,542	0/0:35,0:25:57.01:0,57,1030	0/0:33,0:20:40.81:0,41,700	0/0:29,0:29:72.18:0,72,1133	0/0:18,0:18:42.13:0,42,709	0/0:18,0:18:44.17:0,44,747	0/0:22,0:22:57.16:0,57,950	0/0:20,0:20:60.17:0,60,1025	1/1:13,0:13:4.73:32,5,0	1/1:18,0:17:14.71:129,15,0	0/0:13,0:12:33.10:0,33,579	0/0:15,0:14:36.12:0,36,666	0/0:12,0:12:36.12:0,36,675	0/0:23,0:22:63.19:0,63,1087	0/0:20,0:20:54.17:0,54,985	1/1:7,1:16:2.72:53,3,0	0/1:10,13:25:48.94:338,0,49	0/0:19,0:19:48.14:0,48,815	0/0:13,0:13:36.10:0,36,540	0/0:26,0:25:57.06:0,57,912	0/0:12,0:12:30.10:0,30,537	0/0:12,0:11:27.06:0,27,420	0/0:30,0:30:75.22:0,75,1329	1/1:14,0:14:15.89:251,16,0	0/0:19,0:19:54.17:0,54,913	0/0:21,0:20:57.19:0,57,1032	0/0:5,0:5:15.02:0,15,203
chr10	72478856	.	G	GGT	248.27	PASS	AB=0.950;AC=14;AF=0.259;AN=54;BaseQRankSum=1.937;DP=501;FS=0.000;HRun=0;HaplotypeScore=101.8028;InbreedingCoeff=0.3771;MQ=58.50;MQ0=20;MQRankSum=-1.133;QD=1.61;ReadPosRankSum=0.677;VQSLOD=1.6813;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:30:20.94:0,21,193	0/0:5,0:5:6.01:0,6,59	1/1:29,0:7:0.47:1,0,0	./.	0/0:13,0:13:15.02:0,15,154	0/0:19,0:19:14.87:0,15,144	0/1:16,0:15:1.10:1,0,163	0/0:28,0:27:8.04:0,8,87	0/1:19,0:19:6.95:7,0,185	0/0:10,0:14:8.48:0,8,41	0/0:9,0:15:3.31:0,3,15	1/1:7,3:10:8.92:105,9,0	1/1:10,0:9:0.02:18,0,0	0/0:14,0:14:9.01:0,9,97	0/0:14,0:14:14.92:0,15,153	0/0:12,0:12:24.01:0,24,246	0/1:20,0:19:5.65:20,0,6	0/0:22,0:22:4.21:0,4,178	0/0:19,0:15:5.51:0,6,64	0/0:14,0:14:8.67:0,9,61	0/0:44,0:43:36.65:0,37,343	1/1:10,0:9:6:67,6,0	1/1:5,6:11:4.87:51,5,0	0/1:21,6:27:4.95:114,0,5	0/0:6,0:9:2.84:0,3,14	0/0:14,0:14:8.68:0,9,61	0/0:15,0:15:12.03:0,12,129	0/0:11,0:9:12.03:0,12,130
chr10	72480979	.	TA	T	1013.86	PASS	AB=0.842;AC=16;AF=0.286;AN=56;BaseQRankSum=5.828;DP=488;FS=0.000;HRun=14;HaplotypeScore=56.6359;InbreedingCoeff=0.3487;MQ=78.36;MQ0=0;MQRankSum=-0.530;QD=4.78;ReadPosRankSum=2.420;VQSLOD=1.2991;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,2:15:11.13:11,0,193	0/0:8,0:8:17.99:0,18,158	0/0:25,0:17:17.05:0,17,100	0/1:12,1:12:11.04:11,0,41	0/1:22,3:25:0.89:1,0,266	0/0:17,0:17:33.03:0,33,302	0/1:9,3:12:20.14:20,0,118	0/1:28,5:34:27.61:28,0,437	0/0:15,0:16:29.87:0,30,265	1/1:2,9:11:17.72:122,18,0	0/1:6,13:21:18.19:167,0,18	0/0:15,2:17:15.44:0,15,281	0/1:8,1:10:2.58:3,0,117	0/0:15,0:15:16.72:0,17,259	0/0:18,0:18:39.03:0,39,359	0/0:17,0:17:21.01:0,21,301	1/1:3,18:22:46.65:314,47,0	1/1:0,11:12:25.83:170,26,0	0/0:25,1:27:26.57:0,27,397	0/0:19,1:21:3.31:0,3,241	0/0:12,0:12:26.98:0,27,237	0/0:11,0:11:30.03:0,30,276	0/0:17,0:19:30.38:0,30,261	0/0:13,0:13:17.38:0,17,277	1/1:8,16:24:49.87:336,50,0	0/1:11,2:12:3.08:3,0,100	0/0:27,2:29:30.69:0,31,529	0/0:10,0:10:11.58:0,12,107
chr10	72481974	.	AAAAC	A	454.80	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.686;DP=630;FS=2.617;HRun=0;HaplotypeScore=101.0739;InbreedingCoeff=0.9880;MQ=69.98;MQ0=0;MQRankSum=-1.675;QD=30.32;ReadPosRankSum=0.464;VQSLOD=3.2072;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:82.52:0,83,1947	0/0:12,0:12:30.10:0,30,739	0/0:28,0:27:66.14:0,66,1435	0/0:24,0:24:30.65:0,31,584	0/0:35,0:35:87.30:0,87,2129	0/0:17,0:17:39.13:0,39,956	0/0:25,0:25:60.21:0,60,1480	0/0:22,0:22:36.12:0,36,887	0/0:16,0:16:33.09:0,33,756	0/0:20,0:20:39.13:0,39,962	0/0:16,0:16:36.12:0,36,887	0/0:19,0:19:48.15:0,48,1133	0/0:16,0:16:45.15:0,45,1103	0/0:23,0:23:63.20:0,63,1466	0/0:40,0:40:99:0,99,2436	0/0:26,0:26:66.23:0,66,1627	0/0:30,0:30:66.23:0,66,1587	1/1:3,12:15:33.11:549,33,0	0/0:10,0:10:18.06:0,18,444	0/0:20,0:20:45.15:0,45,1084	0/0:33,0:33:78.27:0,78,1896	0/0:18,0:18:39.13:0,39,912	0/0:17,0:17:39.13:0,39,957	0/0:30,0:30:66.23:0,66,1628	0/0:16,0:16:36.12:0,36,888	0/0:24,0:24:57.20:0,57,1406	0/0:31,0:31:81.28:0,81,1985	0/0:8,0:8:24.08:0,24,592
chr10	72482645	.	CT	C	663.28	PASS	AB=0.794;AC=9;AF=0.161;AN=56;BaseQRankSum=4.884;DP=375;FS=4.822;HRun=12;HaplotypeScore=39.8799;InbreedingCoeff=0.3232;MQ=62.73;MQ0=8;MQRankSum=0.891;QD=6.03;ReadPosRankSum=0.385;VQSLOD=0.9675;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:29:53.57:0,54,597	0/0:3,0:3:6.01:0,6,61	0/0:18,0:4:11.91:0,12,93	0/0:17,0:6:6:0,6,53	0/0:17,0:17:24.04:0,24,239	0/0:16,0:16:32.84:0,33,299	0/1:7,2:9:28.49:28,0,93	0/0:27,0:27:35.90:0,36,344	0/0:7,0:7:14.98:0,15,135	1/1:4,6:10:16.97:122,17,0	0/1:7,3:11:2.75:82,0,3	0/0:6,0:6:9.02:0,9,91	0/0:10,0:9:18.01:0,18,171	0/0:10,0:9:21.03:0,21,207	0/0:4,0:4:6.01:0,6,61	0/1:7,0:7:11.18:11,0,74	1/1:10,26:35:49.09:440,49,0	0/1:21,4:24:9.68:10,0,433	0/0:22,0:20:30.05:0,30,299	0/0:9,0:9:24.05:0,24,244	0/0:4,0:4:9.02:0,9,91	0/0:5,0:5:5.96:0,6,49	0/0:3,1:4:5.97:0,6,50	0/0:8,0:7:12.01:0,12,115	0/1:2,8:10:9.52:118,0,10	0/0:18,1:19:12.83:0,13,308	0/0:11,0:11:27.01:0,27,258	0/0:14,0:14:33.07:0,33,335
chr10	72484609	.	C	CT	1159.21	PASS	AB=0.851;AC=19;AF=0.339;AN=56;BaseQRankSum=1.916;DP=541;FS=6.686;HRun=14;HaplotypeScore=85.0525;InbreedingCoeff=0.2368;MQ=59.67;MQ0=10;MQRankSum=-2.082;QD=4.26;ReadPosRankSum=-2.574;VQSLOD=1.0183;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:28:19.27:0,19,188	0/0:10,0:10:23.63:0,24,153	0/1:15,0:9:1.61:2,0,40	0/1:10,0:8:9.71:10,0,14	0/0:17,0:19:29.56:0,30,168	0/1:22,3:26:6.53:7,0,208	0/1:17,1:20:1.71:2,0,102	0/0:24,1:28:21.87:0,22,240	0/0:14,0:14:25.57:0,26,159	1/1:15,7:21:21:185,21,0	0/1:9,2:12:1.37:97,0,1	1/1:10,10:20:10.57:188,11,0	0/1:14,9:23:1.06:220,0,1	0/0:16,0:16:22.57:0,23,139	0/1:22,1:22:7.20:7,0,166	0/0:26,0:26:36.99:0,37,236	1/1:12,10:22:13.53:219,14,0	0/0:25,1:28:8.07:0,8,205	0/0:17,0:16:20.57:0,21,134	0/0:22,0:22:26.39:0,26,172	0/0:18,0:18:26.26:0,26,173	0/1:7,4:11:6.26:67,0,6	1/1:9,11:20:1.60:142,2,0	0/1:7,11:19:27.75:155,0,28	0/1:7,4:11:17.13:17,0,29	0/1:12,0:12:8.49:8,0,78	0/0:26,1:30:14.69:0,15,201	0/0:9,0:9:5.88:0,6,38
chr10	72486577	.	G	GC	3886.59	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-12.183;DP=689;FS=8.348;HRun=2;HaplotypeScore=67.7222;InbreedingCoeff=0.9348;MQ=81.02;MQ0=0;MQRankSum=-1.120;QD=39.26;ReadPosRankSum=-1.249;VQSLOD=3.3788;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,105,1288	0/0:6,0:6:18.02:0,18,205	0/0:17,0:17:47.88:0,48,573	0/0:18,0:18:44.79:0,45,572	0/0:18,0:18:51.15:0,51,621	0/0:23,0:23:69.22:0,69,855	0/0:33,0:33:96.24:0,96,1159	0/0:18,0:18:51.16:0,51,631	0/0:24,0:24:69.20:0,69,841	1/1:0,24:24:72.21:994,72,0	1/1:1,12:13:30.10:431,30,0	0/0:21,0:21:60.19:0,60,743	0/0:36,0:36:99:0,108,1337	0/0:32,0:32:87.27:0,87,1077	0/0:18,0:18:48.15:0,48,595	0/0:21,0:21:60.19:0,60,744	1/1:0,27:27:78.26:1123,78,0	0/0:25,0:25:75.24:0,75,929	0/0:27,0:27:78.24:0,78,955	0/0:15,0:15:45.14:0,45,556	0/0:60,0:60:99:0,168,2039	0/0:25,0:25:63.14:0,63,763	0/0:18,0:18:45.14:0,45,557	0/0:36,0:36:99:0,108,1339	1/1:0,35:35:93.31:1339,93,0	0/0:28,2:30:0.88:0,1,917	0/0:18,0:18:51.16:0,51,632	0/0:10,0:10:27.08:0,27,334
chr10	72487053	.	A	AGT	4005.65	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-10.689;DP=647;FS=0.949;HRun=0;HaplotypeScore=74.8610;InbreedingCoeff=0.9997;MQ=86.61;MQ0=0;MQRankSum=0.254;QD=46.04;ReadPosRankSum=3.003;VQSLOD=5.0587;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.30:0,90,1325	0/0:15,0:15:45.14:0,45,643	0/0:21,0:21:57.16:0,57,762	0/0:22,0:22:53.26:0,53,733	0/0:25,0:25:75.25:0,75,1103	0/0:24,0:24:72.23:0,72,1038	0/0:17,0:17:51.16:0,51,732	0/0:33,0:33:99:0,99,1412	0/0:26,0:26:75.24:0,75,1083	1/1:1,20:22:63.19:1144,63,0	1/1:0,17:18:51.17:952,51,0	0/0:25,0:25:63.21:0,63,928	0/0:22,0:22:63.15:0,63,883	0/0:17,0:17:51.17:0,51,746	0/0:29,0:29:87.29:0,87,1281	0/0:29,0:29:81.26:0,81,1173	1/1:2,21:24:57.20:1066,57,0	0/0:15,0:15:42.14:0,42,618	0/0:22,0:22:66.22:0,66,956	0/0:29,0:29:78.26:0,78,1149	0/0:17,0:17:51.17:0,51,751	0/0:25,0:25:75.23:0,75,1065	0/0:18,0:18:54.18:0,54,794	0/0:15,0:15:45.15:0,45,662	1/1:4,19:23:45.15:843,45,0	0/0:45,1:46:79.25:0,79,1888	0/0:28,0:28:81.27:0,81,1192	0/0:9,0:9:27.07:0,27,375
chr10	72489199	.	ATTTT	A	1657.65	PASS	AB=0.553;AC=9;AF=0.161;AN=56;BaseQRankSum=4.071;DP=462;FS=1.095;HRun=15;HaplotypeScore=84.9766;InbreedingCoeff=0.7251;MQ=70.92;MQ0=6;MQRankSum=-0.085;QD=13.70;ReadPosRankSum=4.273;VQSLOD=0.4595;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,1:42:27.91:146,0,28	0/0:7,0:8:18.02:0,18,326	0/0:43,0:18:10.89:0,11,352	0/0:22,0:9:9.06:0,9,58	0/0:17,0:20:46.92:0,47,845	0/0:14,0:13:36.12:0,36,718	0/0:9,0:9:18.05:0,18,368	0/0:27,0:29:49.43:0,49,809	0/0:13,0:13:27.04:0,27,483	1/1:6,15:22:41.70:491,42,0	1/1:6,11:18:16.79:319,17,0	0/0:12,0:12:30.08:0,30,497	0/0:9,0:9:27.05:0,27,437	0/0:6,0:7:17.85:0,18,333	0/0:13,0:14:42.13:0,42,823	0/0:13,0:13:30.10:0,30,683	1/1:1,17:18:35.97:490,36,0	0/0:12,0:15:20.99:0,21,251	0/0:18,0:22:49.20:0,49,729	0/0:14,0:13:39.08:0,39,631	0/0:4,0:4:3:0,3,26	0/0:4,0:4:9.02:0,9,153	0/0:8,0:8:15.04:0,15,276	0/0:11,0:10:24.07:0,24,479	1/1:6,15:21:1.99:365,2,0	0/0:15,0:17:42.01:0,42,756	0/0:19,0:19:51.10:0,51,883	0/0:9,0:10:24.05:0,24,434
chr10	72490306	.	ATTC	A	3718.24	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.686;DP=539;FS=20.335;HRun=0;HaplotypeScore=74.5616;InbreedingCoeff=0.9938;MQ=76.04;MQ0=0;MQRankSum=-2.466;QD=48.29;ReadPosRankSum=1.662;VQSLOD=3.6448;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,2346	0/0:5,0:5:15.05:0,15,340	0/0:18,0:18:51.16:0,51,1053	0/0:11,0:11:27.09:0,27,600	0/0:16,0:16:48.16:0,48,1087	0/0:18,0:18:54.19:0,54,1224	0/0:10,0:10:27.09:0,27,612	0/0:41,0:41:99:0,114,2529	0/0:18,0:18:51.18:0,51,1156	1/1:1,30:31:90.31:1499,90,0	1/1:0,15:15:45.11:720,45,0	0/0:17,0:17:48.16:0,48,1082	0/0:16,0:16:45.15:0,45,1019	0/0:18,0:18:54.19:0,54,1224	0/0:19,0:19:57.20:0,57,1292	0/0:19,0:19:54.17:0,54,1181	1/1:0,14:14:42.14:700,42,0	0/0:21,0:21:63.22:0,63,1424	0/0:25,0:25:72.25:0,72,1617	0/0:19,0:19:57.20:0,57,1292	0/0:7,0:7:21.07:0,21,476	0/0:17,0:17:51.18:0,51,1155	0/0:12,0:12:36.12:0,36,816	0/0:20,0:20:57.19:0,57,1261	1/1:0,17:17:48.16:800,48,0	0/0:31,0:31:93.32:0,93,2093	0/0:36,0:34:99:0,108,2429	0/0:11,0:11:33.11:0,33,748
chr10	72495362	.	G	GT	5759.91	PASS	AB=0.673;AC=54;AF=0.964;AN=56;BaseQRankSum=-2.328;DP=187;FS=11.555;HRun=1;HaplotypeScore=40.8361;InbreedingCoeff=0.0666;MQ=69.62;MQ0=0;MQRankSum=-2.258;QD=30.80;ReadPosRankSum=1.717;VQSLOD=3.0712;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:30.05:406,30,0	1/1:0,1:1:3.01:43,3,0	0/1:3,1:3:1.71:93,0,2	0/1:1,0:4:1.43:67,0,1	1/1:2,9:11:11.82:169,12,0	1/1:0,8:8:21.07:299,21,0	1/1:0,7:7:18.06:258,18,0	1/1:11,5:16:48.16:687,48,0	1/1:5,0:5:6.02:90,6,0	1/1:0,3:3:9.03:129,9,0	1/1:0,8:8:21.07:295,21,0	1/1:0,10:10:27.09:379,27,0	1/1:0,5:5:15.05:215,15,0	1/1:6,0:6:6.02:90,6,0	1/1:0,8:8:21.07:301,21,0	1/1:0,4:4:12.04:171,12,0	1/1:1,3:4:6.01:71,6,0	1/1:0,5:5:12.04:171,12,0	1/1:0,3:3:9.03:129,9,0	1/1:0,7:7:21.07:284,21,0	1/1:1,9:10:18.06:258,18,0	1/1:0,2:2:6.02:86,6,0	1/1:0,10:10:24.08:336,24,0	1/1:0,4:4:0.42:1,0,0	1/1:0,6:6:18.06:254,18,0	1/1:0,9:9:27.09:390,27,0	1/1:8,0:8:3.01:45,3,0	1/1:0,2:2:3.01:43,3,0
chr10	72496886	.	G	GA	1323.27	PASS	AB=0.879;AC=17;AF=0.304;AN=56;BaseQRankSum=-3.163;DP=460;FS=4.104;HRun=12;HaplotypeScore=53.3083;InbreedingCoeff=0.5669;MQ=63.43;MQ0=8;MQRankSum=-0.168;QD=8.32;ReadPosRankSum=1.219;VQSLOD=2.3163;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,25:34:33.05:321,33,0	0/1:7,1:8:11.29:11,0,90	0/0:7,0:7:8.09:0,8,29	0/1:4,0:3:0.16:2,0,0	0/0:21,0:23:36.74:0,37,252	0/1:11,1:12:5.32:5,0,129	0/0:9,0:9:14.54:0,15,102	0/0:28,2:30:39.33:0,39,451	0/0:12,0:12:32.70:0,33,234	0/0:22,0:21:35.18:0,35,244	0/0:9,0:9:20.88:0,21,153	1/1:5,10:14:33.05:320,33,0	1/1:2,11:13:24.03:227,24,0	0/1:12,1:13:30.69:31,0,124	0/0:14,2:16:6.55:0,7,208	0/0:20,0:20:53.62:0,54,390	0/0:26,0:28:60.61:0,61,419	0/1:8,9:15:3.88:128,0,4	0/0:6,0:7:10.95:0,11,71	0/0:27,0:29:63.63:0,64,447	0/0:15,0:14:32.45:0,32,230	1/1:2,10:12:0.77:135,1,0	1/1:7,9:16:2.45:158,2,0	1/1:3,9:12:18.34:161,18,0	0/0:15,0:16:31.75:0,32,221	0/0:8,0:9:22.91:0,23,159	0/0:29,1:30:49.51:0,50,499	0/0:14,0:12:29.81:0,30,217
chr10	72497972	.	GAA	G	1304.69	PASS	AB=0.765;AC=8;AF=0.143;AN=56;BaseQRankSum=5.677;DP=645;FS=1.677;HRun=13;HaplotypeScore=92.3645;InbreedingCoeff=0.7543;MQ=70.24;MQ0=3;MQRankSum=-1.409;QD=11.35;ReadPosRankSum=3.183;VQSLOD=2.7597;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:32:68.57:0,69,838	0/0:6,0:7:17.55:0,18,225	0/0:33,0:19:19.59:0,20,230	0/1:28,0:17:2.46:2,0,55	0/0:15,0:18:44.57:0,45,545	0/0:15,0:17:35.55:0,36,445	0/0:32,1:34:48.20:0,48,977	0/0:23,0:23:51.12:0,51,667	0/0:24,0:24:48.09:0,48,637	1/1:5,12:18:23.88:282,24,0	0/1:4,10:18:3.40:172,0,3	0/0:26,0:28:66.90:0,67,838	0/0:16,0:18:6.38:0,6,361	0/0:16,0:17:35.60:0,36,468	0/0:21,1:23:45.14:0,45,619	0/0:17,0:19:39.05:0,39,517	1/1:3,30:32:71.96:678,72,0	0/0:21,0:24:67.65:0,68,852	0/0:24,1:27:6.36:0,6,609	0/0:18,1:23:18.10:0,18,467	0/0:16,0:18:41.35:0,41,454	0/0:28,0:28:75.15:0,75,954	0/0:22,0:25:61.66:0,62,778	0/0:22,0:26:56.67:0,57,772	1/1:3,14:17:33.04:319,33,0	0/0:23,1:27:36.56:0,37,781	0/0:19,0:22:53.64:0,54,679	0/0:14,0:14:36.12:0,36,518
chr10	72500173	.	TAC	T	299.02	PASS	AB=0.925;AC=23;AF=0.426;AN=54;BaseQRankSum=4.662;DP=427;FS=1.651;HRun=0;HaplotypeScore=64.4668;InbreedingCoeff=-0.1016;MQ=71.36;MQ0=11;MQRankSum=-1.832;QD=1.12;ReadPosRankSum=-0.186;VQSLOD=1.5705;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:12.97:0,13,127	0/0:7,0:7:10.07:0,10,190	0/0:26,0:18:0:0,0,0	./.	0/0:13,0:13:15.05:0,15,220	0/1:18,0:18:12.32:12,0,123	0/1:15,1:17:50.49:50,0,92	0/0:27,0:26:21.07:0,21,306	0/1:11,4:15:11.98:12,0,236	1/1:6,0:11:5.75:34,6,0	1/1:3,0:7:8.52:42,9,0	0/0:11,0:11:9.01:0,9,113	0/0:8,0:8:9.50:0,10,136	0/1:7,1:8:18.01:18,0,144	0/1:18,0:18:44.54:45,0,77	0/1:7,1:8:24.02:24,0,74	1/1:16,0:16:2.68:14,3,0	0/1:17,0:15:11.79:12,0,164	0/1:13,1:13:15.03:15,0,151	0/0:14,0:13:18.06:0,18,260	0/1:28,0:28:12.68:13,0,355	0/1:15,4:19:6.26:6,0,265	0/0:13,0:13:22.32:0,22,316	0/1:22,2:24:47.15:47,0,292	1/1:5,0:10:5.68:28,6,0	0/1:11,1:12:21.03:21,0,106	0/1:13,1:14:34.56:35,0,283	1/1:5,2:7:3.01:33,3,0
chr10	72500302	.	T	TA	1855.66	PASS	AB=0.951;AC=13;AF=0.232;AN=56;BaseQRankSum=-6.873;DP=451;FS=11.742;HRun=11;HaplotypeScore=58.4847;InbreedingCoeff=0.7470;MQ=74.78;MQ0=0;MQRankSum=-1.983;QD=12.13;ReadPosRankSum=0.912;VQSLOD=1.9190;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,9:17:24.94:272,25,0	0/0:11,0:11:32.85:0,33,251	0/0:21,0:20:39.30:0,39,269	0/1:17,0:16:2.89:3,0,83	0/0:24,1:25:35.27:0,35,455	0/0:17,0:17:44.78:0,45,345	0/0:12,0:12:20.89:0,21,162	0/0:19,0:19:23.84:0,24,180	0/0:15,0:15:38.82:0,39,299	1/1:5,24:30:71.93:700,72,0	1/1:5,9:14:32.99:317,33,0	0/1:12,1:13:3.57:4,0,159	0/0:10,0:10:27.36:0,27,207	0/0:8,0:8:20.92:0,21,163	0/0:16,0:16:47.77:0,48,365	0/0:12,0:12:32.87:0,33,255	1/1:6,15:21:45.09:457,45,0	0/0:17,0:17:38.84:0,39,305	0/0:11,0:11:20.90:0,21,163	0/0:21,0:21:47.80:0,48,370	0/0:10,0:10:20.89:0,21,158	0/0:12,0:12:23.87:0,24,183	0/0:20,0:20:50.79:0,51,395	0/0:16,0:16:36.68:0,37,261	1/1:4,10:14:27.94:276,28,0	0/1:23,2:25:3.17:3,0,337	0/0:13,1:13:2.43:0,2,202	0/0:10,0:10:22.94:0,23,168
chr10	72500342	.	CGTGTGTGTGTGT	C	578.60	PASS	AB=0.955;AC=10;AF=0.192;AN=52;BaseQRankSum=3.788;DP=429;FS=0.000;HRun=0;HaplotypeScore=133.3219;InbreedingCoeff=0.5903;MQ=60.06;MQ0=34;MQRankSum=-3.753;QD=8.51;ReadPosRankSum=0.782;VQSLOD=2.1966;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:30.57:0,31,713	0/0:11,0:11:9.50:0,10,343	./.	./.	0/0:33,0:33:45.61:0,46,1511	0/0:21,0:21:18.95:0,19,593	0/0:12,0:9:12.04:0,12,398	0/0:16,0:16:12.04:0,12,302	0/1:7,0:6:0:0,0,0	1/1:12,3:16:15.05:419,15,0	1/1:8,2:10:3:26,3,0	0/0:15,0:12:18.06:0,18,643	0/0:12,0:10:21.07:0,21,794	0/0:8,0:8:9.03:0,9,267	0/0:11,0:11:6.02:0,6,240	0/0:9,0:9:6.02:0,6,286	1/1:12,0:10:3.01:102,3,0	0/1:9,0:9:19.83:20,0,104	0/0:9,0:9:6.02:0,6,107	0/0:17,0:17:15.51:0,16,536	0/0:14,0:12:18.05:0,18,685	0/0:16,0:15:21.07:0,21,899	0/0:24,0:23:27.46:0,27,1158	0/0:19,0:15:12.02:0,12,415	1/1:4,6:11:6.02:146,6,0	0/0:18,0:16:18.05:0,18,463	0/0:18,0:17:29.92:0,30,873	0/0:14,0:10:12.51:0,13,474
chr10	72502552	.	C	CT	356.69	PASS	AB=0.964;AC=16;AF=0.286;AN=56;BaseQRankSum=0.602;DP=395;FS=2.260;HRun=15;HaplotypeScore=94.5108;InbreedingCoeff=0.3084;MQ=70.21;MQ0=15;MQRankSum=-3.103;QD=2.38;ReadPosRankSum=-3.186;VQSLOD=-0.4190;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:28,1:29:11.28:11,0,126	0/0:3,0:3:5.85:0,6,36	0/0:18,0:12:1.86:0,2,23	0/0:27,0:12:11.52:0,12,66	0/0:22,0:23:13.91:0,14,79	0/0:10,0:9:8.69:0,9,54	0/0:16,0:16:17.42:0,17,107	0/0:27,0:25:1.43:0,1,81	0/0:12,0:11:19.38:0,19,116	1/1:5,6:12:17.78:132,18,0	1/1:5,2:9:14.45:91,14,0	0/0:10,0:10:11.47:0,11,66	0/1:8,0:8:0:0,0,0	0/1:13,1:15:32.91:33,0,37	0/0:16,0:16:1.57:0,2,16	0/1:8,0:8:8.64:9,0,42	1/1:14,2:19:16.34:114,16,0	0/0:12,0:13:4.89:0,5,41	0/0:14,0:14:18.37:0,18,96	0/0:15,0:14:19.68:0,20,122	0/0:5,0:6:1.82:0,2,16	1/1:6,0:6:3:25,3,0	0/1:13,1:14:36.23:42,0,36	0/0:10,0:9:11.44:0,11,71	1/1:12,2:14:6.88:51,7,0	0/0:9,0:9:6.54:0,7,39	0/0:14,0:14:7:0,7,39	0/1:13,0:12:10.31:10,0,42
chr10	72502569	.	GTTC	G	553.59	PASS	AB=0.987;AC=20;AF=0.357;AN=56;BaseQRankSum=-0.582;DP=368;FS=0.000;HRun=0;HaplotypeScore=62.1039;InbreedingCoeff=-0.5142;MQ=46.17;MQ0=34;MQRankSum=-1.256;QD=2.08;ReadPosRankSum=0.480;VQSLOD=1.4341;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,2:29:99:101,0,182	0/0:5,0:4:6.02:0,6,89	1/1:8,0:3:5.03:29,5,0	0/0:22,0:4:5.12:0,5,72	0/1:21,0:21:19.74:20,0,183	0/1:12,0:9:8.33:8,0,136	0/0:14,0:13:11.85:0,12,193	0/1:26,0:24:84.25:84,0,180	0/0:10,0:9:2.81:0,3,126	0/1:9,0:9:35.98:36,0,53	0/1:9,0:8:25.66:26,0,50	0/0:13,0:13:3.09:0,3,168	0/1:6,0:6:13.52:14,0,16	0/0:12,0:12:12.64:0,13,137	0/1:11,0:11:23.99:24,0,41	0/1:7,0:7:28:28,0,54	0/1:16,0:16:69.96:70,0,87	0/1:13,1:13:67.02:94,0,67	0/1:11,0:11:16.95:17,0,136	0/1:18,0:17:32.57:33,0,246	0/1:7,0:6:28.26:28,0,44	0/0:4,0:4:2.93:0,3,76	0/0:10,0:10:1.62:0,2,140	0/0:12,0:8:1.72:0,2,27	0/1:12,1:11:20.37:20,0,91	0/1:13,0:12:16.66:17,0,134	0/1:15,0:14:5.50:6,0,73	0/1:15,0:12:48.02:48,0,72
chr10	72502570	.	TTC	T	902.67	PASS	AB=0.949;AC=25;AF=0.446;AN=56;BaseQRankSum=1.262;DP=370;FS=0.000;HRun=0;HaplotypeScore=55.8902;InbreedingCoeff=-0.5880;MQ=45.90;MQ0=35;MQRankSum=-2.522;QD=2.84;ReadPosRankSum=3.149;VQSLOD=1.4784;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:29:93.18:116,0,93	0/0:5,0:4:5.70:0,6,67	1/1:8,0:3:5.03:29,5,0	0/0:22,0:4:5.12:0,5,72	0/1:21,1:22:36.89:37,0,121	0/1:12,0:9:23.26:23,0,96	0/0:14,0:13:1.07:0,1,119	0/1:18,10:25:99:114,0,144	0/1:9,1:9:3.19:3,0,56	0/1:10,0:10:21.59:22,0,64	0/1:7,2:8:33.99:43,0,34	0/1:13,0:13:7.38:7,0,90	0/1:5,1:6:0.23:33,0,0	0/1:10,2:12:0.98:1,0,58	0/1:10,1:11:4.80:75,0,5	0/1:7,0:7:17.62:36,0,18	0/1:14,2:16:53.72:116,0,54	0/1:13,1:13:53.28:73,0,53	0/1:11,0:11:21.87:22,0,97	0/1:17,1:16:60.39:60,0,162	0/1:7,0:6:28.74:39,0,29	0/1:4,0:4:0.87:1,0,40	0/1:11,0:10:3.61:4,0,111	0/0:11,0:7:2.20:0,2,28	0/1:13,0:11:25.15:25,0,36	0/1:13,0:12:22.32:22,0,86	0/1:15,0:14:13.18:76,0,13	0/1:15,0:12:51.08:67,0,51
chr10	72502571	.	TC	T	1223.50	PASS	AB=0.943;AC=30;AF=0.536;AN=56;BaseQRankSum=1.125;DP=372;FS=0.474;HRun=1;HaplotypeScore=49.5456;InbreedingCoeff=-0.4821;MQ=43.85;MQ0=38;MQRankSum=-3.317;QD=3.67;ReadPosRankSum=4.793;VQSLOD=0.2637;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,4:29:84.86:136,0,85	0/0:5,0:4:5.61:0,6,47	1/1:6,1:2:5.03:29,5,0	0/0:22,0:4:5.11:0,5,71	0/1:20,2:22:58.62:59,0,71	0/1:11,1:9:38.89:39,0,59	0/1:12,2:13:33.99:34,0,65	0/1:27,1:25:99:116,0,114	0/1:10,0:9:7.17:31,0,7	0/1:10,0:10:17.54:18,0,62	0/1:8,1:8:28.21:40,0,28	0/1:11,2:13:35.51:36,0,38	1/1:5,1:6:11.20:37,11,0	0/1:12,0:12:12.80:26,0,13	1/1:10,1:11:16.34:86,16,0	1/1:7,0:7:11.56:55,12,0	0/1:14,2:16:60:119,0,60	0/1:13,1:13:47.85:48,0,61	0/1:12,0:11:26.36:26,0,72	0/1:16,2:16:77.59:78,0,90	0/1:7,0:6:17.10:39,0,17	0/1:4,0:4:0.44:0,0,22	0/1:12,0:10:19.90:20,0,84	0/0:10,2:7:2.81:0,3,29	0/1:12,1:11:21.45:35,0,21	0/1:11,2:12:45.83:58,0,46	1/1:12,3:14:5.78:137,6,0	0/1:15,0:12:35.49:80,0,35
chr10	72503489	.	G	GTATATA	3787.07	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-0.086;DP=580;FS=1.873;HRun=0;HaplotypeScore=119.8433;InbreedingCoeff=0.9930;MQ=63.50;MQ0=0;MQRankSum=-8.456;QD=51.18;ReadPosRankSum=-0.258;VQSLOD=3.8257;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:69.68:0,70,1437	0/0:11,0:11:27.07:0,27,546	0/0:17,0:17:15.40:0,15,578	0/0:14,0:14:25.13:0,25,433	0/0:30,0:31:68.72:0,69,1565	0/0:28,0:29:78.24:0,78,1596	0/0:12,0:12:30.09:0,30,613	0/0:40,0:40:78.25:0,78,1552	0/0:22,0:22:51.16:0,51,1072	1/1:6,12:20:48.12:1303,48,0	1/1:10,9:20:33.11:956,33,0	0/0:16,0:16:33.11:0,33,703	0/0:18,0:18:48.15:0,48,1006	0/0:17,0:17:45.15:0,45,982	0/0:18,0:18:48.16:0,48,1048	0/0:14,0:14:36.12:0,36,786	1/1:7,3:14:27.09:715,27,0	0/0:12,0:12:30.10:0,30,652	0/0:18,0:19:48.15:0,48,931	0/0:41,0:41:99:0,105,2170	0/0:14,0:14:33.10:0,33,678	0/0:17,0:17:36.12:0,36,757	0/0:24,0:24:54.15:0,54,1075	0/0:7,0:7:21.07:0,21,457	1/1:7,8:20:29.20:813,29,0	0/0:27,0:27:66.23:0,66,1416	0/0:35,0:34:87.28:0,87,1856	0/0:25,0:25:75.20:0,75,1478
chr10	72503865	.	ATGTGTGTGTG	A	5136.01	PASS	AB=0.671;AC=8;AF=0.143;AN=56;BaseQRankSum=7.716;DP=690;FS=1.066;HRun=0;HaplotypeScore=220.9836;InbreedingCoeff=0.7005;MQ=64.07;MQ0=8;MQRankSum=-10.429;QD=39.51;ReadPosRankSum=1.476;VQSLOD=4.4440;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,14:31:24.98:661,0,25	0/0:7,0:7:15.05:0,15,743	0/0:35,0:19:18.06:0,18,635	0/0:32,0:19:24.08:0,24,852	0/0:23,0:26:54.15:0,54,2263	0/0:18,0:20:45.63:0,46,1960	0/0:23,0:25:51.15:0,51,2145	0/0:21,0:22:39.13:0,39,1382	0/0:23,0:24:54.19:0,54,2493	1/1:9,19:29:57.19:1583,57,0	1/1:4,19:24:48.16:1415,48,0	0/0:15,0:26:53:0,53,2315	0/0:6,0:22:35.84:0,36,1599	0/0:17,0:17:42.14:0,42,1972	0/0:39,0:43:93.09:0,93,4299	0/0:26,0:28:66.21:0,66,2733	0/1:16,14:30:68.98:742,0,69	0/0:8,0:13:27.09:0,27,1039	0/0:18,0:16:31.66:0,32,1107	0/0:23,0:25:57.20:0,57,2340	0/0:45,0:48:99:0,99,4287	0/0:11,0:24:32.98:0,33,1377	0/0:5,0:11:18.63:0,19,934	0/0:6,0:17:33.11:0,33,1383	1/1:5,11:16:24.08:735,24,0	0/0:23,0:24:57.20:0,57,2277	0/0:24,0:26:63.22:0,63,2554	0/0:23,0:24:57.20:0,57,2307
chr10	72504064	.	C	CT	999.85	PASS	AB=0.855;AC=12;AF=0.214;AN=56;BaseQRankSum=6.377;DP=428;FS=1.891;HRun=12;HaplotypeScore=65.6628;InbreedingCoeff=0.3373;MQ=61.18;MQ0=4;MQRankSum=-1.612;QD=8.06;ReadPosRankSum=-0.562;VQSLOD=2.4357;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:58.64:0,59,422	0/0:9,0:9:22.69:0,23,158	0/1:6,0:4:4.07:4,0,12	0/0:8,0:8:6.21:0,6,27	0/0:10,0:9:14.88:0,15,109	0/0:10,0:11:28.88:0,29,203	0/0:20,0:18:35.53:0,36,252	0/0:36,0:37:53:0,53,374	0/0:9,0:10:16.93:0,17,115	1/1:3,13:16:36.06:348,36,0	0/1:6,4:10:1.03:131,0,1	0/0:11,0:11:13.89:0,14,85	0/0:13,0:13:32.79:0,33,239	0/1:11,1:12:8.36:8,0,110	0/0:20,0:20:34.75:0,35,246	0/0:7,0:7:20.88:0,21,153	1/1:10,22:32:1.03:529,1,0	0/0:22,1:22:17.81:0,18,298	0/0:22,0:22:49.24:0,49,335	0/1:8,1:9:8.30:8,0,110	0/0:17,1:18:3:0,3,243	0/0:6,0:7:10.94:0,11,71	0/0:11,0:10:17.84:0,18,127	0/0:18,0:19:31.75:0,32,224	0/1:4,4:7:4.72:97,0,5	0/1:21,2:25:9.65:10,0,243	0/0:15,0:15:26.81:0,27,195	1/1:6,0:5:1.82:5,2,0
chr10	72504332	.	GC	G	2723.79	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=4.815;DP=392;FS=1.209;HRun=2;HaplotypeScore=43.0109;InbreedingCoeff=0.8655;MQ=44.89;MQ0=36;MQRankSum=-1.092;QD=28.37;ReadPosRankSum=0.126;VQSLOD=3.0675;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:19:24.08:0,24,359	0/0:2,0:2:6.02:0,6,90	./.	./.	0/0:17,0:17:48.15:0,48,697	0/0:13,0:12:27.09:0,27,404	0/0:7,0:7:9.03:0,9,135	0/0:13,0:10:27.09:0,27,392	0/0:7,0:7:21.06:0,21,294	1/1:1,18:18:51.17:662,51,0	1/1:0,16:16:42.14:545,42,0	0/0:7,0:7:21.07:0,21,306	0/0:5,0:5:15.05:0,15,223	0/0:7,0:7:8.98:0,9,135	0/0:9,0:8:15.05:0,15,225	0/0:4,0:4:12.04:0,12,180	1/1:1,40:30:81.26:1050,81,0	0/0:25,0:21:33.11:0,33,490	0/0:17,0:16:48.15:0,48,700	0/0:16,0:16:48.16:0,48,718	0/0:27,0:25:24.04:0,24,334	0/0:8,0:8:21.07:0,21,315	0/0:7,0:7:15.05:0,15,225	0/0:3,0:3:3.01:0,3,45	1/1:1,19:18:48.12:623,48,0	0/0:17,0:17:51.16:0,51,728	0/0:15,0:15:45.15:0,45,674	0/0:5,0:5:12.04:0,12,180
chr10	72505111	.	A	AT	977.03	PASS	AB=0.910;AC=19;AF=0.339;AN=56;BaseQRankSum=-4.593;DP=479;FS=4.977;HRun=14;HaplotypeScore=54.1212;InbreedingCoeff=0.2650;MQ=67.19;MQ0=1;MQRankSum=2.415;QD=4.05;ReadPosRankSum=-2.383;VQSLOD=0.2492;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:23:26.19:0,26,97	0/0:9,0:9:20.62:0,21,134	1/1:18,0:10:4.48:40,4,0	0/1:16,0:8:5.10:5,0,44	0/1:16,5:22:57.63:58,0,138	0/1:22,0:23:0.53:1,0,209	0/0:14,0:17:19.29:0,19,171	0/0:29,0:29:37.96:0,38,237	0/0:11,0:11:26.57:0,27,173	1/1:11,13:25:19.48:263,19,0	1/1:6,10:17:7.52:172,8,0	0/0:13,1:16:9.17:0,9,176	0/0:7,0:7:14.73:0,15,96	0/1:9,2:11:29.15:29,0,86	0/0:21,0:22:52.17:0,52,332	0/0:18,0:18:41.27:0,41,268	1/1:8,6:16:23.66:290,24,0	0/0:2,0:13:25.34:0,25,84	0/1:14,0:14:6.15:6,0,78	0/0:14,0:15:4.96:0,5,135	0/0:13,2:18:9.20:0,9,164	0/1:12,2:14:26.12:26,0,108	0/0:16,1:19:7.13:0,7,158	0/1:7,1:8:5.65:6,0,95	1/1:5,12:17:21:185,21,0	0/1:18,5:24:59.30:59,0,138	0/0:19,0:20:11.24:0,11,191	0/1:15,1:16:12.47:12,0,150
chr10	72505891	.	A	AGTGT	1898.94	PASS	AB=0.886;AC=20;AF=0.385;AN=52;BaseQRankSum=1.078;DP=455;FS=3.189;HRun=0;HaplotypeScore=100.0453;InbreedingCoeff=0.4642;MQ=65.38;MQ0=5;MQRankSum=-0.644;QD=8.12;ReadPosRankSum=-1.002;VQSLOD=2.4064;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:27:5.57:67,6,0	0/0:2,0:2:0:0,0,0	./.	./.	0/0:15,0:14:17.99:0,18,220	0/0:11,0:18:15.04:0,15,197	0/0:17,0:19:13.88:0,14,431	0/1:22,0:21:0.30:0,0,30	0/1:10,0:10:12.92:13,0,129	1/1:23,0:22:32.84:351,33,0	0/1:9,0:14:1.05:147,0,1	1/1:6,5:13:15.05:354,15,0	1/1:7,0:11:9.03:138,9,0	0/0:9,0:11:11.75:0,12,166	0/0:10,0:13:15.02:0,15,156	0/0:6,0:6:9.03:0,9,118	0/1:23,0:27:9.77:213,0,10	0/1:21,0:21:50.42:50,0,112	0/0:20,0:20:8.96:0,9,110	0/0:18,0:20:14.59:0,15,334	0/0:23,0:23:27.06:0,27,367	1/1:2,5:9:6.02:142,6,0	1/1:6,4:10:8.77:154,9,0	0/1:14,8:24:38.58:266,0,39	1/1:12,0:20:15.98:177,16,0	0/0:16,0:17:11.63:0,12,284	0/0:14,0:14:15.04:0,15,204	0/0:10,0:10:6.01:0,6,72
chr10	72505929	.	TGCGC	T	1945.40	PASS	AB=0.986;AC=8;AF=0.143;AN=56;BaseQRankSum=-0.258;DP=490;FS=6.305;HRun=0;HaplotypeScore=96.8612;InbreedingCoeff=0.1177;MQ=60.81;MQ0=4;MQRankSum=-1.624;QD=13.23;ReadPosRankSum=-1.620;VQSLOD=2.5308;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:27:33.44:156,0,33	0/0:3,0:3:6.02:0,6,80	0/0:21,0:13:32.68:0,33,579	0/0:21,0:13:35.30:0,35,579	0/0:18,0:17:39.09:0,39,747	0/0:16,0:16:30.10:0,30,557	0/0:31,0:29:81.28:0,81,1506	0/0:23,0:22:66.04:0,66,983	0/0:7,0:7:18.06:0,18,414	0/1:20,0:19:23.33:263,0,23	0/1:16,0:16:31.10:172,0,31	0/0:13,0:13:27.09:0,27,539	0/0:8,0:8:18.05:0,18,235	0/0:15,0:15:33.73:0,34,694	0/0:13,0:13:32.32:0,32,526	0/0:10,0:10:21.06:0,21,346	0/1:19,1:21:20.46:367,0,20	1/1:18,4:22:49.83:792,50,0	0/0:15,0:15:30.57:0,31,419	0/0:19,0:19:54.17:0,54,1079	0/0:33,0:33:80.91:0,81,1353	0/0:12,0:12:24.08:0,24,391	0/0:12,0:12:27.09:0,27,469	0/0:30,0:29:56.33:0,56,997	0/1:20,0:20:19:313,0,19	0/1:20,0:20:24.94:25,0,738	0/0:14,0:14:36.58:0,37,597	0/0:8,0:8:24.05:0,24,411
chr10	72507189	.	AGT	A	182.25	PASS	AB=0.942;AC=11;AF=0.229;AN=48;BaseQRankSum=3.404;DP=559;FS=1.953;HRun=0;HaplotypeScore=138.5623;InbreedingCoeff=0.1770;MQ=54.52;MQ0=11;MQRankSum=-2.451;QD=1.40;ReadPosRankSum=-1.523;VQSLOD=2.5957;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:0.42:0,0,235	./.	0/0:33,0:18:9.80:0,10,65	0/0:35,0:14:4.42:0,4,198	0/0:10,0:10:30.10:0,30,467	0/0:24,1:25:27.97:0,28,407	0/0:25,0:25:33.10:0,33,502	0/1:17,2:19:35.77:36,0,198	0/0:18,0:17:21.91:0,22,308	1/1:19,0:19:0.36:113,0,0	0/0:9,0:9:0:0,0,0	0/0:14,0:14:2.97:0,3,20	1/1:10,0:8:0.45:1,0,0	0/0:24,0:24:29.30:0,29,397	0/0:12,0:12:12.03:0,12,169	0/0:24,3:27:36.09:0,36,513	1/1:15,0:14:0.47:1,0,0	0/1:10,0:10:2.50:75,0,2	0/0:14,0:10:9.03:0,9,127	0/0:9,0:9:15.04:0,15,217	0/0:104,6:105:75.56:0,76,2559	0/0:8,0:7:3:0,3,25	./.	./.	./.	0/1:17,1:16:37.78:38,0,274	0/1:10,2:12:28.29:28,0,274	0/0:14,0:14:33.11:0,33,524
chr10	72507193	.	T	TGCGA	229.34	PASS	AB=0.961;AC=9;AF=0.173;AN=52;BaseQRankSum=2.942;DP=588;FS=8.470;HRun=0;HaplotypeScore=160.9785;InbreedingCoeff=0.4435;MQ=49.41;MQ0=14;MQRankSum=-2.269;QD=2.90;ReadPosRankSum=-3.858;VQSLOD=0.5545;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:26.32:0,26,426	./.	0/0:34,0:15:41.46:0,41,640	0/0:37,0:13:34.35:0,34,590	0/0:11,0:11:30.10:0,30,597	0/0:25,0:24:44.42:0,44,765	0/0:28,0:28:60.17:0,60,1032	0/0:17,0:16:45.06:0,45,721	0/0:18,0:17:33.09:0,33,547	0/0:22,0:22:47.91:0,48,579	0/0:8,0:8:2.93:0,3,49	0/1:13,2:14:24.22:114,0,24	1/1:10,2:10:6.22:55,6,0	0/0:22,0:22:39.09:0,39,679	0/0:13,0:13:17.98:0,18,295	0/0:26,0:26:48.12:0,48,851	0/1:17,0:16:7.25:7,0,124	0/0:10,0:10:24.08:0,24,387	0/0:16,0:11:24.05:0,24,404	0/0:11,0:11:15.05:0,15,289	0/0:118,0:112:99:0,243,4524	0/1:9,0:9:39.93:84,0,40	1/1:8,0:8:3.01:45,3,0	1/1:16,2:18:5.98:57,6,0	./.	0/0:17,0:15:42.14:0,42,696	0/0:12,0:12:30.10:0,30,531	0/0:14,0:14:42.14:0,42,795
chr10	72507201	.	T	TGCGA	92.93	PASS	AB=1.000;AC=9;AF=0.173;AN=52;BaseQRankSum=4.091;DP=598;FS=12.126;HRun=0;HaplotypeScore=161.0308;InbreedingCoeff=0.3853;MQ=44.62;MQ0=16;MQRankSum=-2.438;QD=1.03;ReadPosRankSum=-3.179;VQSLOD=1.1022;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:23.35:0,23,422	./.	0/0:28,0:11:24:0,24,336	0/0:45,0:13:30.37:0,30,488	0/0:14,0:14:42.14:0,42,784	0/0:25,0:24:44.15:0,44,757	0/0:25,0:25:59.96:0,60,922	0/0:19,0:16:45.07:0,45,658	0/0:18,0:17:30.09:0,30,512	0/1:22,0:22:45.43:45,0,378	1/1:9,0:9:2.58:25,3,0	0/0:13,0:13:2.66:0,3,35	0/1:16,0:14:14.16:32,0,14	0/0:21,0:21:36.09:0,36,634	0/0:13,0:13:18:0,18,323	0/0:24,0:24:42.11:0,42,742	1/1:13,2:15:0.99:100,1,0	0/0:11,0:11:24.97:0,25,378	0/0:13,0:8:24.05:0,24,375	0/0:14,0:14:17.95:0,18,333	0/0:112,0:105:99:0,223,4130	0/0:13,0:13:2.47:0,2,47	0/1:11,0:11:0:0,0,0	1/1:16,0:16:0.47:1,0,0	./.	0/0:20,0:18:46.97:0,47,680	0/0:17,0:17:42.05:0,42,637	0/0:12,0:12:33.11:0,33,659
chr10	72507209	.	TGC	T	722.63	PASS	AB=0.955;AC=14;AF=0.292;AN=48;BaseQRankSum=6.669;DP=568;FS=11.627;HRun=0;HaplotypeScore=118.8129;InbreedingCoeff=0.1808;MQ=42.11;MQ0=15;MQRankSum=-5.786;QD=3.44;ReadPosRankSum=-3.937;VQSLOD=0.6360;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,3:21:49.86:50,0,87	./.	0/1:22,0:6:11.66:12,0,12	0/1:41,0:10:32.98:33,0,134	0/0:15,0:15:38.53:0,39,534	0/0:20,0:19:8.66:0,9,415	0/0:23,0:23:45.04:0,45,765	0/0:20,0:17:7.24:0,7,258	0/1:18,0:17:5.10:5,0,320	0/1:15,7:22:3.82:356,0,4	1/1:5,3:8:3:25,3,0	0/0:12,0:11:1.22:0,1,21	0/1:16,0:14:0.82:1,0,1	0/0:17,0:17:17.64:0,18,366	0/0:15,0:15:16.48:0,16,192	0/0:23,0:23:35.86:0,36,559	1/1:10,3:13:17.49:106,17,0	1/1:6,4:9:21.01:251,21,0	0/0:12,0:7:2.01:0,2,144	0/0:12,0:12:13.29:0,13,220	0/0:109,0:103:99:0,137,3106	0/0:13,0:13:3.01:0,3,45	./.	./.	./.	0/1:21,0:18:19.31:19,0,317	0/1:17,0:17:8.64:9,0,284	0/0:13,0:13:36.02:0,36,639
chr10	72507239	.	TGC	T	42.07	PASS	AB=1.000;AC=4;AF=0.080;AN=50;BaseQRankSum=7.107;DP=536;FS=4.093;HRun=0;HaplotypeScore=97.1141;InbreedingCoeff=0.2627;MQ=40.95;MQ0=19;MQRankSum=-4.196;QD=0.76;ReadPosRankSum=-0.495;VQSLOD=1.5860;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:19:15.03:0,15,250	0/0:6,0:5:8.13:0,8,61	0/0:22,0:6:10.66:0,11,60	0/0:31,0:1:3.01:0,3,49	0/0:16,0:16:36.05:0,36,576	0/0:19,0:18:17.10:0,17,382	0/0:23,0:23:43.09:0,43,739	0/0:18,0:16:4.45:0,4,529	0/0:10,0:9:6.27:0,6,239	0/1:31,0:31:31.01:31,0,278	0/0:9,0:9:3.01:0,3,55	0/0:13,3:15:2.21:0,2,8	0/0:9,3:11:4.90:0,5,14	0/0:12,0:11:8.99:0,9,267	0/0:12,0:12:20.81:0,21,279	0/0:23,0:22:32.91:0,33,501	1/1:11,0:12:16.35:102,16,0	0/0:9,0:6:10.22:0,10,223	0/0:10,0:7:17.97:0,18,238	0/0:12,0:12:12:0,12,183	0/0:96,1:92:99:0,110,2374	0/0:11,4:14:0:0,0,0	./.	./.	./.	0/0:26,0:20:7.76:0,8,382	0/1:12,0:11:15.94:16,0,365	0/0:9,1:10:13.27:0,13,408
chr10	72507241	.	CGA	C	78	PASS	AB=0.985;AC=6;AF=0.120;AN=50;BaseQRankSum=6.507;DP=535;FS=1.428;HRun=0;HaplotypeScore=97.8120;InbreedingCoeff=0.1991;MQ=40.90;MQ0=17;MQRankSum=-5.532;QD=0.86;ReadPosRankSum=0.941;VQSLOD=1.5532;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,4:19:12.91:0,13,224	0/0:6,0:5:8.56:0,9,84	0/0:25,0:6:11.62:0,12,107	0/0:31,0:1:3.01:0,3,36	0/0:15,1:16:39.08:0,39,596	0/0:18,0:18:24.64:0,25,455	0/0:25,0:24:48.65:0,49,818	0/0:17,0:15:37.16:0,37,620	0/0:11,0:10:19.29:0,19,305	0/1:29,2:31:21.38:21,0,502	0/0:9,1:10:3.01:0,3,58	0/0:14,0:15:2.59:0,3,12	0/0:10,0:11:6.97:0,7,19	0/0:11,1:11:23.51:0,24,312	0/0:12,0:12:21.07:0,21,357	0/0:22,0:22:21.99:0,22,622	1/1:7,5:12:16.49:138,16,0	0/1:9,0:6:1.65:2,0,216	0/0:10,0:8:18.04:0,18,277	0/0:10,1:11:12.48:0,12,190	0/0:94,0:89:99:0,189,2751	0/0:12,0:14:0.47:0,0,1	./.	./.	./.	0/1:27,0:20:9.30:9,0,471	0/1:12,0:11:22.39:22,0,371	0/0:10,0:10:9.96:0,10,381
chr10	72507255	.	AGT	A	57.31	PASS	AB=0.966;AC=10;AF=0.208;AN=48;BaseQRankSum=5.733;DP=552;FS=0.000;HRun=0;HaplotypeScore=101.1582;InbreedingCoeff=0.0935;MQ=39.71;MQ0=17;MQRankSum=-3.798;QD=0.39;ReadPosRankSum=0.415;VQSLOD=1.8045;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:2.87:0,3,15	0/0:8,0:7:9.03:0,9,144	0/0:21,0:5:6.01:0,6,74	./.	0/0:13,0:13:21.07:0,21,334	0/0:19,0:18:21.07:0,21,319	0/0:27,0:25:38.49:0,38,636	0/1:11,1:12:11.61:12,0,190	0/0:13,1:12:15.52:0,16,243	0/1:32,0:31:35.27:35,0,138	1/1:10,0:10:2.98:21,3,0	0/0:12,2:13:0:0,0,0	0/0:14,1:15:2.89:0,3,18	0/0:17,0:16:21.04:0,21,305	0/0:13,0:13:21.02:0,21,304	0/0:28,0:26:39.12:0,39,605	0/1:15,0:14:14.40:14,0,26	0/1:10,0:7:5.34:5,0,11	0/0:10,0:8:17.98:0,18,224	0/0:13,0:12:9.03:0,9,138	0/0:90,4:91:72.15:0,72,1994	./.	./.	./.	1/1:25,1:26:2.88:15,3,0	0/1:27,0:19:9.38:9,0,407	0/1:12,2:13:69.70:70,0,216	0/0:4,0:4:9.01:0,9,121
chr10	72507267	.	T	TGCGA	56.88	PASS	AB=0.990;AC=9;AF=0.180;AN=50;BaseQRankSum=6.464;DP=566;FS=2.057;HRun=0;HaplotypeScore=117.0753;InbreedingCoeff=0.2597;MQ=38.34;MQ0=20;MQRankSum=-5.937;QD=0.44;ReadPosRankSum=-4.989;VQSLOD=0.4275;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:19:23.62:24,0,38	0/0:7,0:6:9:0,9,179	0/0:19,0:4:11.89:0,12,123	./.	0/0:17,0:16:18.55:0,19,415	0/0:21,0:20:29.90:0,30,507	0/0:29,0:26:52.24:0,52,956	0/0:11,0:11:26.30:0,26,424	0/0:17,0:15:13.91:0,14,297	0/1:30,0:29:99:106,0,356	0/0:9,1:10:3.01:0,3,37	1/1:15,0:12:1.25:3,1,0	0/1:14,0:14:15.58:16,0,26	0/0:21,0:20:27.08:0,27,456	0/0:16,0:15:21.03:0,21,380	0/0:30,0:27:45.05:0,45,829	0/0:11,0:11:13.28:0,13,124	0/0:6,0:4:7.90:0,8,34	0/0:13,0:10:21.07:0,21,371	0/0:15,0:14:5.26:0,5,173	0/0:96,0:89:99:0,162,2934	1/1:23,0:20:0.47:1,0,0	./.	./.	1/1:22,3:25:4.12:18,4,0	0/0:29,0:20:53.58:0,54,825	0/0:15,0:14:34.70:0,35,543	0/0:4,0:4:9.02:0,9,167
chr10	72507273	.	TGC	T	240.96	PASS	AB=0.944;AC=13;AF=0.271;AN=48;BaseQRankSum=7.226;DP=531;FS=1.546;HRun=0;HaplotypeScore=92.9158;InbreedingCoeff=0.2763;MQ=38.08;MQ0=16;MQRankSum=-6.163;QD=1.52;ReadPosRankSum=-0.349;VQSLOD=1.9382;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,7:16:0:0,0,0	0/0:7,0:6:8.95:0,9,171	0/0:16,0:3:5.75:0,6,46	./.	0/0:17,0:16:21.03:0,21,350	0/0:22,0:21:23.15:0,23,301	0/0:28,0:24:33.97:0,34,714	0/1:11,0:11:13.28:13,0,192	0/0:16,0:14:15.52:0,16,286	0/1:26,1:24:41.39:125,0,41	0/0:8,1:10:0:0,0,0	0/1:11,1:9:0.01:0,0,0	0/1:14,0:14:0.36:0,0,0	0/0:20,0:19:23.97:0,24,349	0/0:15,0:13:20.80:0,21,331	0/0:29,0:26:39.03:0,39,712	1/1:9,3:11:0.97:74,1,0	1/1:5,0:3:4.72:33,5,0	0/0:12,0:10:23.08:0,23,178	0/0:15,0:14:8.99:0,9,124	0/0:91,0:82:99:0,117,2282	./.	./.	./.	1/1:17,0:17:2.88:15,3,0	0/1:29,0:20:43.35:43,0,440	0/1:14,0:13:60.21:60,0,225	0/0:3,0:3:6.02:0,6,115
chr10	72507281	.	TGC	T	170.13	PASS	AB=0.980;AC=11;AF=0.250;AN=44;BaseQRankSum=7.427;DP=475;FS=6.566;HRun=0;HaplotypeScore=81.0188;InbreedingCoeff=0.4921;MQ=37.56;MQ0=16;MQRankSum=-6.901;QD=1.47;ReadPosRankSum=-2.360;VQSLOD=0.4330;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,1:13:0:0,0,0	0/0:6,0:6:9.03:0,9,167	./.	./.	0/0:17,0:16:17.96:0,18,221	0/0:17,0:16:10.89:0,11,185	0/0:25,0:21:27.16:0,27,757	0/0:8,0:8:6.58:0,7,238	0/0:17,0:15:15.52:0,16,287	0/1:20,0:18:43.75:44,0,119	./.	0/1:12,0:9:0.05:0,0,0	0/1:12,0:11:0.28:0,0,0	0/0:19,1:19:21.07:0,21,374	0/0:15,1:14:17.86:0,18,338	0/0:30,0:27:41.95:0,42,632	1/1:7,4:10:16.53:172,17,0	1/1:4,0:3:7.73:54,8,0	0/0:10,0:7:17.89:0,18,288	0/0:13,1:13:6.02:0,6,114	0/0:82,0:74:99:0,125,2096	./.	./.	./.	1/1:12,2:15:2.88:15,3,0	0/1:26,1:18:6.95:7,0,479	0/0:13,0:12:17.16:0,17,299	0/0:3,0:3:6.02:0,6,115
chr10	72507297	.	TGC	T	44.90	PASS	AB=0.963;AC=9;AF=0.225;AN=40;BaseQRankSum=3.513;DP=363;FS=0.000;HRun=0;HaplotypeScore=63.2149;InbreedingCoeff=0.1916;MQ=36.50;MQ0=12;MQRankSum=-4.251;QD=0.62;ReadPosRankSum=-0.106;VQSLOD=1.3024;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:5,0:5:11.53:0,12,154	./.	./.	0/0:11,1:11:5.98:0,6,74	0/0:15,0:14:8.93:0,9,128	0/0:19,0:15:26.47:0,26,312	0/1:10,0:9:7.22:7,0,123	0/0:11,1:11:9.46:0,9,130	0/1:15,0:14:56.17:56,0,161	./.	./.	0/1:10,0:9:0:0,0,0	0/0:20,0:19:17.96:0,18,249	0/0:13,0:11:8.78:0,9,129	0/0:21,0:19:21:0,21,301	0/1:6,0:6:0:0,0,1	1/1:2,0:1:2.60:10,3,0	0/1:12,2:9:66.81:67,0,115	0/0:13,1:13:6.89:0,7,82	0/0:66,0:56:79.98:0,80,1043	./.	./.	./.	1/1:15,0:14:0.47:1,0,0	0/0:22,0:16:3.64:0,4,286	0/0:12,0:11:14.81:0,15,167	0/0:2,0:2:5.98:0,6,64
chr10	72509098	.	C	CT	19055.25	PASS	AC=54;AF=1.000;AN=54;BaseQRankSum=-1.702;DP=557;FS=0.000;HRun=2;HaplotypeScore=255.9668;InbreedingCoeff=0.0643;MQ=39.03;MQ0=0;MQRankSum=0.775;QD=34.33;ReadPosRankSum=1.459;VQSLOD=3.8852;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:27:57.19:818,57,0	1/1:0,6:6:18.03:237,18,0	1/1:2,0:2:2.68:12,3,0	./.	1/1:5,27:32:60.07:778,60,0	1/1:3,36:39:99:1441,102,0	1/1:3,7:10:27.08:361,27,0	1/1:5,31:36:96.29:1353,96,0	1/1:1,18:19:54.18:776,54,0	1/1:2,16:18:48.16:690,48,0	1/1:1,22:23:63.17:879,63,0	1/1:3,25:28:75.24:1060,75,0	1/1:1,17:18:51.09:687,51,0	1/1:1,9:10:27.09:387,27,0	1/1:2,25:27:69.23:991,69,0	1/1:3,23:26:66.19:926,66,0	1/1:1,16:17:48.15:671,48,0	1/1:2,4:6:0.33:158,0,0	1/1:7,15:22:48.16:688,48,0	1/1:6,28:34:75.16:1020,75,0	1/1:7,4:11:9.03:129,9,0	1/1:3,26:29:78.26:1120,78,0	1/1:6,11:17:33.11:473,33,0	1/1:3,10:13:27.08:370,27,0	1/1:1,17:18:48.12:667,48,0	1/1:6,29:35:90.27:1272,90,0	1/1:5,18:23:54.14:753,54,0	1/1:0,9:9:27.02:339,27,0
chr10	72510117	.	TGCCTAGCAAGCGC	T	3460.04	PASS	AC=8;AF=0.160;AN=50;BaseQRankSum=8.107;DP=188;FS=5.328;HRun=0;HaplotypeScore=67.3174;InbreedingCoeff=0.7888;MQ=46.64;MQ0=11;MQRankSum=-6.985;QD=111.61;ReadPosRankSum=2.437;VQSLOD=3.2953;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:32.71:0,33,1931	0/0:3,0:3:9.03:0,9,604	./.	./.	0/0:2,0:2:3.01:0,3,126	0/0:9,0:9:21.07:0,21,1123	0/0:10,0:10:24.08:0,24,1475	0/0:6,0:6:9.03:0,9,292	0/0:2,0:2:6.02:0,6,408	1/1:0,8:7:21.07:880,21,0	1/1:0,11:11:30.10:1197,30,0	0/0:5,0:5:15.05:0,15,784	0/0:4,0:4:12.04:0,12,599	0/0:5,0:5:15.05:0,15,547	0/0:5,0:5:15.05:0,15,977	0/0:6,0:6:18.06:0,18,1046	1/1:0,4:4:12.04:503,12,0	0/0:16,0:15:42.14:0,42,2668	0/0:9,0:6:18.06:0,18,1069	0/0:2,0:2:3.01:0,3,126	0/0:7,0:6:14.65:0,15,901	./.	0/0:7,0:7:12.04:0,12,660	0/0:4,0:4:9.03:0,9,601	1/1:1,7:7:21.07:880,21,0	0/0:10,0:10:27.09:0,27,1237	0/0:11,0:11:33.11:0,33,1835	0/0:6,0:4:12.01:0,12,548
chr10	72510168	.	GA	G	1295.99	PASS	AB=0.817;AC=12;AF=0.214;AN=56;BaseQRankSum=6.812;DP=401;FS=2.279;HRun=13;HaplotypeScore=52.7017;InbreedingCoeff=0.4124;MQ=59.62;MQ0=10;MQRankSum=-2.169;QD=8.25;ReadPosRankSum=2.127;VQSLOD=2.4263;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,20:37:68.07:495,68,0	0/0:5,0:5:12.01:0,12,112	0/1:22,0:6:1.18:1,0,74	0/0:15,0:4:8.65:0,9,57	0/0:17,0:17:4.22:0,4,291	0/0:18,0:17:38.97:0,39,355	0/1:4,2:6:25.80:26,0,94	0/0:32,1:32:25.45:0,25,548	0/0:5,0:5:12.02:0,12,116	0/1:10,1:11:2.36:148,0,2	0/1:5,7:12:25.58:156,0,26	0/0:4,0:4:5.14:0,5,79	0/0:9,0:9:18.03:0,18,175	0/0:7,0:8:17.47:0,17,128	0/1:11,1:12:11.67:12,0,180	0/0:12,0:12:27.51:0,28,259	1/1:5,12:17:22.79:191,23,0	0/1:9,8:16:3.53:124,0,4	0/0:27,0:26:36.33:0,36,491	0/0:8,0:8:17.76:0,18,154	0/0:6,0:6:14.98:0,15,136	0/0:4,0:4:6.01:0,6,58	0/0:7,0:7:14.99:0,15,137	0/0:6,0:6:11.92:0,12,103	1/1:2,20:22:41.37:306,41,0	0/0:22,0:22:50.84:0,51,462	0/0:16,0:16:39.06:0,39,379	0/0:21,1:18:21.18:0,21,335
chr10	72511823	.	T	TACACAC	3059.85	PASS	AB=1.000;AC=13;AF=0.250;AN=52;BaseQRankSum=0.219;DP=748;FS=1.934;HRun=0;HaplotypeScore=168.2104;InbreedingCoeff=0.8527;MQ=56.20;MQ0=10;MQRankSum=-6.628;QD=16.63;ReadPosRankSum=-3.608;VQSLOD=2.6910;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,3:41:8.58:208,9,0	0/0:9,0:10:15.05:0,15,285	./.	./.	0/0:26,0:30:30.07:0,30,765	0/0:18,0:18:36.12:0,36,735	0/0:32,0:35:63.19:0,63,1158	0/0:25,0:26:10.24:0,10,82	0/0:34,0:36:71.31:0,71,1272	1/1:18,16:35:60.15:1468,60,0	1/1:5,15:24:9.13:290,9,0	0/0:16,0:20:38.02:0,38,632	0/0:28,0:28:48.06:0,48,858	0/0:27,0:29:63.15:0,63,1122	0/0:25,0:28:54.04:0,54,1026	0/0:22,0:25:53.92:0,54,1001	1/1:9,11:24:23.26:601,23,0	1/1:10,10:21:11.80:272,12,0	0/1:23,0:23:7.81:8,0,232	0/0:29,0:31:45.26:0,45,808	0/0:43,0:47:72.83:0,73,1373	0/0:21,0:23:42.13:0,42,788	0/0:13,0:13:14.82:0,15,222	0/0:45,0:45:89.84:0,90,1857	1/1:4,8:16:11.99:388,12,0	0/0:18,0:21:17.20:0,17,705	0/0:25,0:29:66.12:0,66,1211	0/0:11,0:12:15.05:0,15,289
chr10	72512392	.	AATAG	A	1090	PASS	AB=0.954;AC=16;AF=0.308;AN=52;BaseQRankSum=-1.022;DP=545;FS=5.864;HRun=0;HaplotypeScore=110.3626;InbreedingCoeff=0.5474;MQ=62.06;MQ0=2;MQRankSum=2.401;QD=4.98;ReadPosRankSum=1.076;VQSLOD=1.8206;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,1:35:32.92:409,33,0	0/0:7,0:7:14.99:0,15,169	./.	./.	0/0:33,0:33:48.02:0,48,899	0/0:26,0:26:38.94:0,39,445	0/0:17,0:17:17.96:0,18,147	0/0:30,0:30:23.80:0,24,169	0/1:14,0:14:22.48:22,0,195	0/0:33,0:33:56.82:0,57,669	0/0:16,0:16:36:0,36,433	0/0:11,0:11:1.55:0,2,43	0/0:19,0:19:21.21:0,21,207	0/0:17,0:17:26.99:0,27,336	0/0:19,0:19:36.01:0,36,456	0/1:16,0:16:99:146,0,106	0/0:25,0:26:32.99:0,33,456	0/0:14,0:13:20.94:0,21,169	1/1:11,6:17:15:147,15,0	1/1:14,19:34:6.39:119,6,0	1/1:6,15:20:6.02:93,6,0	0/0:13,0:13:11.03:0,11,99	0/0:17,0:17:23.97:0,24,200	0/1:27,0:27:0.52:1,0,83	0/0:20,0:19:15.48:0,15,177	0/1:17,5:22:61.64:160,0,62	1/1:7,18:25:3.01:46,3,0	1/1:8,0:8:14.94:116,15,0
chr10	72512436	.	GATACATAC	G	2566.15	PASS	AB=1.000;AC=16;AF=0.308;AN=52;BaseQRankSum=-0.747;DP=572;FS=8.356;HRun=0;HaplotypeScore=175.5319;InbreedingCoeff=0.5184;MQ=56.60;MQ0=6;MQRankSum=0.163;QD=12.96;ReadPosRankSum=-2.915;VQSLOD=1.5739;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:33.09:0,33,508	0/0:16,0:16:39.13:0,39,785	./.	./.	0/0:35,0:35:69.20:0,69,1724	0/0:20,0:20:30.10:0,30,798	0/0:21,0:21:18.49:0,18,285	0/0:44,0:40:3.26:0,3,32	0/0:14,0:14:27.09:0,27,736	0/1:33,0:33:99:361,0,330	0/1:21,0:21:99:309,0,229	1/1:4,11:15:3.01:71,3,0	1/1:22,2:24:37.92:583,38,0	0/0:16,0:16:30.10:0,30,779	0/0:22,0:22:42.14:0,42,1009	0/0:17,0:17:27.09:0,27,711	0/1:18,0:18:99:184,0,328	1/1:17,0:16:24.08:385,24,0	0/0:18,0:18:27.09:0,27,470	0/0:37,0:37:54.89:0,55,1009	0/0:25,0:24:33.11:0,33,547	1/1:4,7:11:6:93,6,0	1/1:10,0:17:3.39:24,3,0	1/1:13,0:13:15.05:272,15,0	0/1:28,0:26:99:457,0,176	0/0:14,0:13:24.55:0,25,425	0/0:27,0:27:24.08:0,24,389	0/0:21,0:21:54.17:0,54,901
chr10	72514436	.	C	CAGGATAAAT	1916.25	PASS	AB=0.750;AC=33;AF=0.971;AN=34;BaseQRankSum=-2.096;DP=44;FS=6.410;HRun=0;HaplotypeScore=16.6328;InbreedingCoeff=-0.1672;MQ=144.12;MQ0=0;MQRankSum=-1.102;QD=47.91;ReadPosRankSum=-1.528;VQSLOD=1.7268;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:1:3:25,3,0	./.	1/1:3,1:10:20.74:848,21,0	0/1:2,0:3:5.83:100,0,6	1/1:3,0:3:9.01:177,9,0	1/1:2,0:2:3:25,3,0	1/1:1,0:1:3.01:48,3,0	1/1:1,0:1:3.01:52,3,0	1/1:1,0:1:3:25,3,0	./.	./.	./.	1/1:2,0:2:5.96:45,6,0	./.	1/1:1,0:1:3:25,3,0	./.	./.	./.	1/1:2,0:2:6.02:122,6,0	1/1:1,0:1:3.01:88,3,0	1/1:1,0:1:2.99:24,3,0	./.	1/1:1,0:1:3.01:72,3,0	1/1:3,0:3:3.01:48,3,0	1/1:4,0:4:12.02:250,12,0	./.	1/1:3,0:3:2.97:20,3,0	./.
chr10	72515737	.	C	CT	695.46	PASS	AB=0.947;AC=6;AF=0.107;AN=56;BaseQRankSum=-3.373;DP=633;FS=1.986;HRun=11;HaplotypeScore=70.6033;InbreedingCoeff=0.5398;MQ=74.16;MQ0=1;MQRankSum=-2.456;QD=9.80;ReadPosRankSum=-2.221;VQSLOD=2.4694;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:54.06:532,54,0	0/0:12,0:12:32.87:0,33,255	0/0:21,0:24:18:0,18,206	0/1:11,0:10:10.04:10,0,25	0/0:29,0:31:54.61:0,55,403	0/0:16,0:16:38.83:0,39,302	0/0:25,0:24:55.75:0,56,421	0/0:12,0:12:20.89:0,21,163	0/0:16,0:16:31.93:0,32,253	0/0:26,0:27:49.78:0,50,377	0/0:21,0:21:38.80:0,39,302	0/0:18,0:18:23.80:0,24,186	0/0:20,0:21:40.82:0,41,304	0/0:21,0:21:42.92:0,43,329	0/0:32,1:33:52.03:0,52,514	0/0:35,0:36:9.15:0,9,546	0/0:28,0:28:52.26:0,52,555	1/1:3,15:18:27.04:268,27,0	0/0:21,0:22:14.60:0,15,258	0/0:27,0:27:56.65:0,57,437	0/1:15,2:17:19.06:19,0,237	0/0:23,1:24:23.30:0,23,364	0/0:20,1:21:23.35:0,23,364	0/0:26,1:29:45.68:0,46,518	0/0:12,3:15:2.41:0,2,201	0/0:33,1:35:17.56:0,18,319	0/0:32,0:32:58.73:0,59,447	0/0:12,1:14:4.46:0,4,208
chr10	72518785	.	G	GCA	699.99	PASS	AB=0.883;AC=17;AF=0.327;AN=52;BaseQRankSum=-2.043;DP=570;FS=3.050;HRun=0;HaplotypeScore=82.8087;InbreedingCoeff=-0.0403;MQ=66.52;MQ0=10;MQRankSum=-1.296;QD=2.62;ReadPosRankSum=-0.865;VQSLOD=1.9030;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:39:29.93:0,30,222	0/1:4,0:4:17.88:18,0,26	./.	./.	0/1:17,1:18:32.31:32,0,85	0/1:18,6:25:29.27:29,0,114	0/1:14,0:16:13.32:13,0,45	0/1:23,0:23:19.86:35,0,20	0/0:17,0:17:5.99:0,6,56	1/1:14,4:22:12.04:168,12,0	0/1:10,1:12:8.13:38,0,8	0/1:14,5:24:28.72:29,0,106	0/0:11,0:14:5.68:0,6,28	0/0:10,0:11:11.85:0,12,104	0/0:12,0:14:11.52:0,12,84	0/0:16,0:17:17.88:0,18,176	0/1:18,6:28:71.54:74,0,72	0/0:18,0:19:11.60:0,12,91	0/0:13,0:13:5.97:0,6,52	0/1:17,0:18:32.79:33,0,38	0/0:27,0:32:11.85:0,12,111	0/1:12,5:19:52.78:77,0,53	0/1:7,1:9:23.38:52,0,23	1/1:19,9:31:10.77:175,11,0	1/1:10,4:16:6.02:87,6,0	0/0:27,0:28:11.82:0,12,98	0/0:25,0:27:35.59:0,36,368	0/0:3,0:4:8.85:0,9,79
chr10	72520551	.	AACAGT	A	1048.08	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.127;DP=714;FS=1.658;HRun=0;HaplotypeScore=138.0089;InbreedingCoeff=0.9920;MQ=82.16;MQ0=0;MQRankSum=-7.527;QD=40.31;ReadPosRankSum=-0.605;VQSLOD=3.6579;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:26:71.56:1143,72,0	0/0:15,0:15:45.15:0,45,1425	0/0:19,0:19:57.11:0,57,1443	0/0:21,0:21:56:0,56,1701	0/0:26,0:26:78.24:0,78,2362	0/0:33,0:33:99:0,99,3147	0/0:19,0:19:57.20:0,57,1829	0/0:32,0:32:96.32:0,96,3040	0/0:21,0:21:63.22:0,63,2030	0/0:25,0:25:72.25:0,72,2394	0/0:35,0:35:99:0,105,3413	0/0:32,0:32:96.33:0,96,3066	0/0:22,0:22:66.19:0,66,2119	0/0:30,0:30:90.31:0,90,2897	0/0:26,0:26:78.27:0,78,2537	0/0:18,0:18:54.19:0,54,1723	0/0:25,0:25:75.24:0,75,2421	0/0:14,0:14:42.13:0,42,1269	0/0:17,0:17:51.17:0,51,1578	0/0:38,0:38:99:0,114,3654	0/0:33,0:33:96.33:0,96,3139	0/0:31,0:31:93.32:0,93,2979	0/0:29,0:29:87.30:0,87,2706	0/0:30,0:30:90.29:0,90,2850	0/0:20,0:20:60.18:0,60,1849	0/0:37,0:37:99:0,111,3473	0/0:34,0:34:99:0,102,3229	0/0:6,0:6:18.06:0,18,553
chr10	72520558	.	CTTAGTTG	C	1302.79	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.641;DP=714;FS=2.565;HRun=0;HaplotypeScore=167.0238;InbreedingCoeff=0.9702;MQ=80.63;MQ0=0;MQRankSum=-7.542;QD=52.11;ReadPosRankSum=-1.044;VQSLOD=3.5992;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:75.18:1398,75,0	0/0:16,0:16:48.16:0,48,1914	0/0:17,0:17:51.18:0,51,2045	0/0:20,0:20:52.32:0,52,1513	0/0:26,0:26:78.27:0,78,3024	0/0:34,0:34:99:0,102,3860	0/0:19,0:19:57.20:0,57,2127	0/0:37,0:37:99:0,111,4111	0/0:20,0:20:60.20:0,60,2211	0/0:30,0:30:81.27:0,81,3131	0/0:37,0:37:99:0,111,4526	0/0:30,0:30:84.29:0,84,3407	0/0:21,0:21:63.22:0,63,2470	0/0:31,0:31:93.32:0,93,3774	0/0:25,0:25:75.26:0,75,2884	0/0:17,0:17:51.18:0,51,2090	0/0:22,0:22:66.23:0,66,2644	0/0:14,0:14:39.13:0,39,1515	0/0:17,0:17:45.15:0,45,1603	0/0:43,0:43:99:0,126,4948	0/0:35,0:35:99:0,105,3729	0/0:32,0:32:96.33:0,96,3686	0/0:24,0:24:72.25:0,72,2762	0/0:30,0:30:90.27:0,90,3560	0/0:18,0:18:54.19:0,54,1935	0/0:33,0:33:99:0,99,3936	0/0:36,0:36:99:0,105,4265	0/0:5,0:5:12.04:0,12,492
chr10	72520711	.	CCAAACAAACAAA	C	3723.98	PASS	AB=0.923;AC=9;AF=0.161;AN=56;BaseQRankSum=8.554;DP=739;FS=4.798;HRun=0;HaplotypeScore=253.4117;InbreedingCoeff=0.7848;MQ=69.94;MQ0=1;MQRankSum=-5.856;QD=31.83;ReadPosRankSum=1.106;VQSLOD=2.8621;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:45:99:0,102,4648	0/0:13,0:13:15.05:0,15,883	0/0:22,0:19:12.04:0,12,385	0/0:33,0:30:27.09:0,27,908	0/0:35,0:35:75.25:0,75,4102	0/0:28,0:28:63.21:0,63,3402	0/0:18,0:19:36.12:0,36,2017	0/0:26,0:26:33.11:0,33,1483	0/0:29,0:29:60.21:0,60,3166	1/1:11,18:29:54.18:1580,54,0	1/1:4,14:19:35.97:1059,36,0	0/0:37,0:37:72.25:0,72,3608	0/0:26,0:26:60.21:0,60,3367	0/0:33,0:34:75.25:0,75,3746	0/0:23,0:24:36.12:0,36,1874	0/0:20,0:20:42.13:0,42,1998	1/1:8,6:14:1.97:49,2,0	0/0:9,0:18:27.09:0,27,693	0/0:11,0:11:9.50:0,10,402	0/0:33,0:33:75.26:0,75,4243	0/0:31,0:33:69.22:0,69,3600	0/0:23,0:24:60.21:0,60,3234	0/0:31,0:33:87.27:0,87,4388	0/0:28,0:28:72.25:0,72,3786	1/1:7,10:19:30.10:1004,30,0	0/1:33,1:36:32.29:32,0,3342	0/0:44,0:44:93.32:0,93,4672	0/0:6,0:5:18:0,18,708
chr10	72523020	.	TCACACA	T	211.57	PASS	AB=0.833;AC=8;AF=0.200;AN=40;BaseQRankSum=2.688;DP=210;FS=0.000;HRun=0;HaplotypeScore=61.7870;InbreedingCoeff=0.3040;MQ=46.41;MQ0=21;MQRankSum=-2.327;QD=6.04;ReadPosRankSum=0.978;VQSLOD=1.4261;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:2.54:0,3,243	./.	./.	./.	0/0:9,0:12:18.06:0,18,393	0/0:12,0:12:27.09:0,27,578	0/0:6,0:6:6.02:0,6,170	0/0:12,0:11:12.04:0,12,230	0/0:5,0:4:2.04:0,2,6	0/1:2,0:3:17.73:38,0,18	./.	1/1:5,3:8:5.63:104,6,0	1/1:5,0:4:3.01:48,3,0	0/0:7,0:6:12.04:0,12,324	0/0:1,0:4:3.01:0,3,78	0/0:5,0:4:6.02:0,6,194	0/0:12,0:12:14.61:0,15,109	0/0:6,0:7:12.04:0,12,281	0/0:6,0:6:12.82:0,13,159	0/0:6,0:5:6.02:0,6,183	0/0:14,0:13:8.54:0,9,216	./.	0/1:9,0:8:76.33:76,0,87	1/1:4,5:9:3.01:60,3,0	./.	0/0:6,0:4:6.02:0,6,135	./.	./.
chr10	72523340	.	AAGG	A	2866.22	PASS	AB=0.636;AC=11;AF=0.196;AN=56;BaseQRankSum=9.624;DP=602;FS=20.751;HRun=0;HaplotypeScore=103.4873;InbreedingCoeff=0.9074;MQ=59.21;MQ0=3;MQRankSum=-5.543;QD=29.86;ReadPosRankSum=1.605;VQSLOD=2.2074;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,10:20:38.96:614,39,0	0/0:5,0:5:15.04:0,15,262	0/0:29,0:20:41.68:0,42,637	0/0:27,0:20:28.57:0,29,471	0/0:26,0:26:69.08:0,69,1248	0/0:32,0:32:82.83:0,83,1560	0/0:14,0:14:16.17:0,16,614	0/0:25,0:25:44.69:0,45,794	0/0:25,0:25:63.22:0,63,1288	1/1:6,13:19:49.98:710,50,0	1/1:7,4:11:24.08:362,24,0	0/0:22,0:22:66.09:0,66,1314	0/0:34,0:34:87.27:0,87,1694	0/0:19,0:19:47.82:0,48,876	0/0:27,0:27:75.18:0,75,1432	0/0:33,0:32:84.27:0,84,1649	1/1:8,7:15:9.14:354,9,0	0/1:3,4:7:2.96:167,0,3	0/0:17,0:17:39.12:0,39,762	0/0:17,0:17:39.12:0,39,770	0/0:20,0:20:45.76:0,46,837	0/0:24,0:24:69.10:0,69,1295	0/0:13,0:12:27.08:0,27,518	0/0:23,0:23:58.85:0,59,1116	1/1:7,17:23:40.26:834,40,0	0/0:29,0:29:81.27:0,81,1614	0/0:23,0:23:60.19:0,60,1191	0/0:22,0:22:54.19:0,54,1127
chr10	72523354	.	A	AG	2097.12	PASS	AB=0.693;AC=6;AF=0.107;AN=56;BaseQRankSum=10.868;DP=651;FS=1.554;HRun=1;HaplotypeScore=107.8734;InbreedingCoeff=-0.1262;MQ=61.13;MQ0=3;MQRankSum=-10.856;QD=13.89;ReadPosRankSum=-2.787;VQSLOD=2.1125;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,7:26:99:221,0,336	0/0:7,0:7:21.07:0,21,272	0/0:29,0:22:18.84:0,19,596	0/0:22,0:19:4.74:0,5,451	0/0:25,0:25:66.20:0,66,834	0/0:30,0:30:84.18:0,84,1039	0/0:15,0:15:27.29:0,27,485	0/0:28,2:30:59:0,59,744	0/0:27,0:27:81.24:0,81,1022	0/1:17,18:35:99:627,0,409	0/1:9,14:23:99:495,0,158	0/0:25,0:25:72.23:0,72,931	0/0:30,0:30:90.28:0,90,1155	0/0:17,0:17:51.15:0,51,648	0/0:27,0:27:81.24:0,81,1024	0/0:32,0:31:93.30:0,93,1206	0/1:12,9:21:99:380,0,177	0/1:5,5:9:69.61:70,0,107	0/0:16,0:16:45.13:0,45,560	0/0:16,0:16:48.15:0,48,611	0/0:16,0:16:40.32:0,40,542	0/0:27,0:27:75.15:0,75,945	0/0:13,0:12:36.10:0,36,453	0/0:20,0:20:58.07:0,58,740	0/1:22,14:35:99:429,0,502	0/0:30,0:30:87.28:0,87,1117	0/0:23,0:23:63.20:0,63,815	0/0:19,0:19:57.18:0,57,727
chr10	72530885	.	A	AT	2858.08	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.842;DP=638;FS=11.083;HRun=7;HaplotypeScore=66.5721;InbreedingCoeff=0.9967;MQ=81.43;MQ0=0;MQRankSum=1.296;QD=28.87;ReadPosRankSum=0.379;VQSLOD=3.6337;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,114,1101	0/0:9,0:9:27.04:0,27,261	0/0:23,0:23:51.02:0,51,475	0/0:21,0:22:19.04:0,19,276	0/0:23,0:23:63.10:0,63,608	0/0:19,0:19:51.08:0,51,492	0/0:18,0:18:39.04:0,39,371	0/0:32,0:32:78.11:0,78,749	0/0:18,0:18:39.02:0,39,365	1/1:1,24:25:69.18:809,69,0	1/1:4,14:18:39.12:470,39,0	0/0:20,0:20:54.08:0,54,521	0/0:18,0:18:51.06:0,51,485	0/0:27,0:27:66.08:0,66,631	0/0:18,0:18:44.20:0,44,433	0/0:25,0:25:69.11:0,69,666	1/1:1,21:22:57.17:689,57,0	0/0:22,0:22:54.08:0,54,521	0/0:21,0:21:57.09:0,57,550	0/0:18,0:18:39.04:0,39,371	0/0:26,0:26:72.11:0,72,695	0/0:25,0:25:66.10:0,66,637	0/0:21,0:21:54.08:0,54,521	0/0:36,0:36:93.08:0,93,877	1/1:1,33:34:87.27:1051,87,0	0/0:24,0:24:36.58:0,37,553	0/0:19,0:19:51.08:0,51,493	0/0:7,0:7:21.03:0,21,202
chr10	72530942	.	CGTGTGTGTGT	C	119.41	PASS	AB=1.000;AC=6;AF=0.125;AN=48;BaseQRankSum=2.731;DP=569;FS=2.385;HRun=0;HaplotypeScore=155.9604;InbreedingCoeff=0.4556;MQ=65.93;MQ0=13;MQRankSum=-0.371;QD=1.37;ReadPosRankSum=0.219;VQSLOD=2.5355;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/0:15,0:14:9.01:0,9,214	0/0:21,0:20:25.33:0,25,611	0/0:22,0:21:15.05:0,15,397	0/0:19,0:19:0.94:0,1,1	0/0:18,0:18:24.14:0,24,416	0/1:26,0:26:0:0,0,0	1/1:11,0:11:3.46:24,3,0	0/0:28,0:28:30.57:0,31,742	0/0:17,0:16:9.01:0,9,141	0/0:14,0:14:12.01:0,12,298	0/0:17,0:17:12.01:0,12,141	0/0:15,0:15:21.07:0,21,574	0/1:30,0:30:10.11:24,0,10	1/1:16,4:19:6.02:175,6,0	0/0:15,0:15:6.02:0,6,180	0/0:15,0:18:24.07:0,24,589	0/0:39,0:37:24.95:0,25,523	0/0:12,0:12:3.01:0,3,48	0/0:11,0:11:6.02:0,6,115	0/0:39,0:39:48.14:0,48,1258	0/0:22,0:21:1.60:0,2,6	0/0:19,0:18:15.03:0,15,506	0/0:21,0:21:30.10:0,30,811	0/0:5,0:3:6.02:0,6,245
chr10	72532155	.	C	CA	3498.72	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.700;DP=753;FS=2.247;HRun=9;HaplotypeScore=72.5651;InbreedingCoeff=0.9703;MQ=72.05;MQ0=1;MQRankSum=-1.724;QD=25.17;ReadPosRankSum=1.267;VQSLOD=4.4778;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:62.97:0,63,547	0/0:13,0:13:35.99:0,36,313	0/0:25,0:25:37.65:0,38,318	0/0:19,0:18:33.54:0,34,268	0/0:45,0:45:99:0,117,1012	0/0:32,0:32:77.97:0,78,677	0/0:15,0:16:44.02:0,44,371	0/0:24,0:24:41.01:0,41,407	0/0:15,0:15:41.96:0,42,357	0/0:33,0:35:82.04:0,82,689	0/0:22,0:22:53.98:0,54,469	1/1:2,16:18:45.12:496,45,0	1/1:6,21:27:40.16:667,40,0	0/0:21,0:21:56.98:0,57,495	0/0:30,0:30:77.97:0,78,676	0/0:32,0:32:77.96:0,78,674	0/0:28,0:28:65.95:0,66,568	0/0:30,0:31:55.47:0,55,617	0/0:21,0:21:44.95:0,45,390	0/0:36,0:36:86.93:0,87,748	0/0:21,0:21:44.94:0,45,383	1/1:5,36:41:99:1095,99,0	1/1:3,24:27:66.18:730,66,0	1/1:7,19:26:5.06:510,5,0	0/0:24,0:24:62.98:0,63,547	0/0:40,0:40:86.94:0,87,753	0/0:43,0:44:99:0,108,930	0/0:14,0:14:38.98:0,39,339
chr10	72533452	.	ATC	A	1272.30	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=8.525;DP=457;FS=0.663;HRun=0;HaplotypeScore=70.5214;InbreedingCoeff=0.9584;MQ=77.75;MQ0=3;MQRankSum=-5.642;QD=23.56;ReadPosRankSum=2.787;VQSLOD=4.1622;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:48.15:0,48,881	0/0:8,0:8:24.07:0,24,430	0/0:18,0:13:31.32:0,31,492	0/0:34,0:22:25.98:0,26,254	0/0:24,0:24:72.23:0,72,1333	0/0:18,0:18:51.16:0,51,951	0/0:4,0:4:12.02:0,12,177	0/0:49,0:49:99:0,141,2448	0/0:12,0:12:36.10:0,36,604	1/1:2,12:14:38.38:564,38,0	1/1:2,8:10:18.06:274,18,0	0/0:11,0:11:27.06:0,27,448	0/0:22,0:22:66.15:0,66,1100	0/0:16,0:16:45.15:0,45,796	0/0:12,0:12:36.07:0,36,594	0/0:9,0:9:24.07:0,24,430	1/1:7,8:14:8.10:177,8,0	0/0:29,0:29:84.26:0,84,1516	0/0:19,0:19:57.15:0,57,945	0/0:20,0:20:60.21:0,60,1146	0/0:5,0:5:15.04:0,15,251	0/0:8,0:8:24.07:0,24,411	0/0:9,0:9:27.08:0,27,488	./.	1/1:3,12:15:27.09:410,27,0	0/0:27,1:28:21.46:0,21,1433	0/0:22,0:22:66.21:0,66,1221	0/0:7,0:7:18.06:0,18,347
chr10	72533474	.	C	CTATA	1861.43	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.709;DP=508;FS=3.421;HRun=0;HaplotypeScore=89.2415;InbreedingCoeff=0.8788;MQ=69.94;MQ0=2;MQRankSum=-4.498;QD=31.02;ReadPosRankSum=-0.412;VQSLOD=3.5458;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:56.84:0,57,963	0/0:9,0:9:27.09:0,27,489	0/0:14,0:12:23.66:0,24,403	0/0:27,0:16:0.33:0,0,188	0/0:34,0:34:96.31:0,96,1689	0/0:17,0:17:45.11:0,45,728	0/0:7,0:7:21.04:0,21,326	0/0:42,0:42:99:0,120,2110	0/0:12,0:12:36.10:0,36,601	1/1:9,5:14:33.11:763,33,0	1/1:4,5:9:18.06:405,18,0	0/0:12,0:12:36.11:0,36,625	0/0:27,0:27:78.25:0,78,1394	0/0:18,0:18:48.14:0,48,809	0/0:18,0:18:48.16:0,48,851	0/0:11,0:11:33.09:0,33,546	1/1:2,15:17:6.02:157,6,0	0/0:23,0:23:60.13:0,60,1003	0/0:25,0:25:54.18:0,54,983	0/0:25,0:25:69.22:0,69,1224	0/0:6,0:6:15.05:0,15,263	0/0:15,0:15:42.13:0,42,710	0/0:11,0:11:33.09:0,33,546	0/0:4,0:4:9.01:0,9,134	1/1:11,8:19:33.09:688,33,0	0/0:37,0:37:22.17:0,22,1666	0/0:22,0:22:63.20:0,63,1089	0/0:7,0:7:21.07:0,21,386
chr10	72535923	.	ATT	A	656.79	PASS	AB=1.000;AC=5;AF=0.093;AN=54;BaseQRankSum=2.407;DP=554;FS=4.127;HRun=16;HaplotypeScore=73.8220;InbreedingCoeff=0.6786;MQ=67.52;MQ0=6;MQRankSum=0.619;QD=8.42;ReadPosRankSum=4.357;VQSLOD=1.2019;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,25:32:56.56:518,57,0	0/0:8,0:10:20.39:0,20,212	0/1:31,0:20:15.48:15,0,67	0/0:12,0:6:8.86:0,9,75	0/0:16,1:22:21.62:0,22,431	0/0:9,0:11:17.41:0,17,191	0/0:21,2:26:12.72:0,13,357	0/0:32,0:38:76.90:0,77,867	0/0:15,0:21:51.10:0,51,538	0/0:19,0:19:42.13:0,42,534	0/0:15,0:15:34.35:0,34,427	0/0:16,0:18:36.03:0,36,389	0/0:14,0:17:37.72:0,38,376	0/0:13,0:14:32.28:0,32,292	0/0:37,0:36:74.89:0,75,977	0/0:16,1:20:18.08:0,18,411	0/0:17,0:17:41.12:0,41,401	1/1:3,12:15:29.82:251,30,0	0/0:11,0:16:34.80:0,35,370	0/0:17,0:21:51.08:0,51,602	0/0:13,1:15:1.30:0,1,222	0/0:15,1:19:31.74:0,32,305	0/0:22,0:27:67.32:0,67,740	0/0:14,0:16:35.29:0,35,339	0/0:17,0:17:49.24:0,49,521	0/0:20,0:24:47.42:0,47,513	0/0:16,0:20:42.57:0,43,436	./.
chr10	72537385	.	CTT	C	1322.57	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=6.905;DP=203;FS=0.812;HRun=5;HaplotypeScore=24.7014;InbreedingCoeff=0.7157;MQ=76.61;MQ0=3;MQRankSum=-0.459;QD=33.91;ReadPosRankSum=1.949;VQSLOD=1.8929;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.12:0,39,686	0/0:4,0:4:9.03:0,9,165	0/0:10,0:5:5.10:0,5,145	0/0:13,0:8:18.05:0,18,276	0/0:8,0:8:9.03:0,9,165	0/0:10,0:10:30.09:0,30,522	0/0:2,0:2:6.02:0,6,110	0/0:21,0:21:60.19:0,60,1020	0/0:2,0:2:6.01:0,6,82	1/1:0,2:1:3.01:42,3,0	1/1:0,6:6:18.06:252,18,0	0/0:3,0:3:5.99:0,6,76	0/0:5,0:5:15.05:0,15,275	0/0:4,0:4:12.04:0,12,220	0/0:6,0:6:18.06:0,18,330	0/0:5,0:5:12.04:0,12,210	1/1:1,21:22:57.19:797,57,0	0/0:11,0:11:33.11:0,33,597	0/0:12,0:12:33.10:0,33,574	0/0:1,0:1:3.01:0,3,55	0/0:8,0:8:21.05:0,21,342	./.	0/0:3,0:3:9.03:0,9,165	0/0:9,0:9:27.04:0,27,430	1/1:0,9:9:27.09:378,27,0	0/0:4,0:4:12.04:0,12,220	0/0:6,0:6:18.06:0,18,325	0/0:3,0:3:9.03:0,9,165
chr10	72538232	.	AAAATAAAT	A	584.43	PASS	AC=6;AF=0.130;AN=46;BaseQRankSum=4.846;DP=297;FS=4.657;HRun=0;HaplotypeScore=71.3054;InbreedingCoeff=0.5464;MQ=69.48;MQ0=1;MQRankSum=-5.211;QD=17.71;ReadPosRankSum=0.247;VQSLOD=1.3291;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:3.01:0,3,104	0/0:5,0:5:6.02:0,6,247	./.	./.	0/0:13,0:13:9.03:0,9,371	0/0:21,0:21:33.11:0,33,1354	0/0:8,0:8:6.02:0,6,105	0/0:33,0:33:39.13:0,39,963	0/0:13,0:13:9.03:0,9,371	./.	1/1:7,3:10:9.03:227,9,0	0/0:14,0:14:12.04:0,12,436	0/0:9,0:9:12.04:0,12,395	0/0:10,0:11:12.02:0,12,301	0/0:4,0:4:3.01:0,3,123	0/0:10,0:10:6.02:0,6,247	1/1:7,7:13:15.05:293,15,0	0/0:8,0:8:6.02:0,6,136	0/0:18,0:19:30.09:0,30,1071	0/0:13,0:13:6.02:0,6,220	0/0:3,0:3:6.02:0,6,192	./.	0/0:9,0:9:3.01:0,3,94	./.	1/1:3,6:9:9.03:186,9,0	0/0:13,0:13:3.01:0,3,36	0/0:12,0:12:21.07:0,21,613	0/0:16,0:16:24.08:0,24,989
chr10	72541195	.	G	GA	1016.28	PASS	AB=0.847;AC=10;AF=0.179;AN=56;BaseQRankSum=-2.446;DP=608;FS=7.046;HRun=12;HaplotypeScore=62.2016;InbreedingCoeff=0.3503;MQ=54.42;MQ0=29;MQRankSum=-0.895;QD=5.08;ReadPosRankSum=-0.001;VQSLOD=1.3524;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:37.75:0,38,265	0/0:7,0:7:17.62:0,18,118	0/0:86,0:10:1.49:0,1,42	0/1:96,0:16:15.55:16,0,55	0/0:21,0:21:0.51:0,1,168	0/0:13,0:13:22.17:0,22,172	0/0:10,0:10:16.93:0,17,115	0/0:33,0:34:43.29:0,43,304	0/0:12,0:12:23.82:0,24,173	1/1:18,9:27:14.10:290,14,0	1/1:6,12:18:45.01:423,45,0	0/0:10,0:11:5.90:0,6,30	0/0:8,0:10:25.58:0,26,169	0/1:7,1:8:13.08:13,0,75	0/0:15,0:16:34.50:0,34,230	0/0:8,0:7:17.90:0,18,131	1/1:4,11:16:0.17:189,0,0	0/0:18,0:20:31:0,31,261	0/0:15,0:14:8.87:0,9,160	0/0:33,0:33:35.57:0,36,410	0/0:6,0:6:14.89:0,15,109	0/0:4,0:4:8.95:0,9,66	0/0:18,0:18:23.51:0,24,173	0/0:13,0:13:14.70:0,15,109	0/1:8,11:19:28.95:227,0,29	0/0:19,0:20:46.60:0,47,325	0/0:25,0:26:64.03:0,64,445	0/1:12,2:13:2.34:2,0,148
chr10	72542988	.	AC	A	2502.16	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.347;DP=576;FS=0.462;HRun=2;HaplotypeScore=87.7641;InbreedingCoeff=0.9989;MQ=90.47;MQ0=0;MQRankSum=-3.981;QD=32.92;ReadPosRankSum=3.122;VQSLOD=3.6826;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.15:0,51,724	0/0:10,0:10:30.10:0,30,449	0/0:23,0:23:69.17:0,69,1006	0/0:21,0:21:63.18:0,63,907	0/0:22,0:22:66.20:0,66,945	0/0:33,0:33:99:0,99,1464	0/0:11,0:11:33.10:0,33,473	0/0:35,0:35:99:0,102,1473	0/0:26,0:26:78.26:0,78,1151	1/1:0,19:19:54.18:700,54,0	1/1:0,14:14:39.08:487,39,0	0/0:15,0:15:45.15:0,45,673	0/0:22,0:22:63.21:0,63,944	0/0:12,0:12:36.12:0,36,539	0/0:27,0:27:81.26:0,81,1190	0/0:28,0:28:84.26:0,84,1221	1/1:0,21:21:57.18:735,57,0	0/0:17,0:17:51.17:0,51,755	0/0:22,0:22:66.20:0,66,965	0/0:20,0:20:60.19:0,60,879	0/0:15,0:15:45.15:0,45,674	0/0:13,0:13:39.13:0,39,581	0/0:9,0:9:24.08:0,24,359	0/0:23,0:23:69.19:0,69,1009	1/1:1,21:22:57.19:740,57,0	0/0:38,1:39:78.43:0,78,1652	0/0:31,0:31:90.30:0,90,1346	0/0:9,0:9:27.09:0,27,404
chr10	72543704	.	ATGTGTGTGTG	A	3745.89	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.094;DP=1086;FS=8.359;HRun=0;HaplotypeScore=310.8626;InbreedingCoeff=0.9478;MQ=56.02;MQ0=20;MQRankSum=-6.318;QD=32.02;ReadPosRankSum=-0.153;VQSLOD=1.8537;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:62:17.74:0,18,291	0/0:14,0:16:36.12:0,36,1268	0/0:41,0:14:12.04:0,12,278	0/0:51,0:32:17.93:0,18,770	0/0:25,0:31:69.22:0,69,2534	0/0:32,0:33:77.63:0,78,3084	0/0:43,0:44:99:0,102,3958	0/0:48,0:43:65.07:0,65,1745	0/0:40,0:40:84.26:0,84,3371	1/1:4,34:37:95.66:2463,96,0	1/1:6,12:18:6.01:125,6,0	0/0:50,0:53:99:0,111,4498	0/0:33,0:34:87.28:0,87,3261	0/0:37,0:40:93.30:0,93,3689	0/0:52,0:54:99:0,111,4493	0/0:34,0:38:84.29:0,84,3831	1/1:13,21:34:24.08:659,24,0	0/0:12,0:20:12.04:0,12,300	0/0:24,0:18:39.09:0,39,1300	0/0:28,0:31:78.27:0,78,2925	0/0:109,0:110:99:0,231,8524	0/0:31,0:32:75.24:0,75,3229	0/0:20,0:21:50.59:0,51,1924	0/0:58,0:58:99:0,129,5357	1/1:4,23:27:29.95:499,30,0	0/0:40,0:40:99:0,102,4204	0/0:23,0:23:60.21:0,60,2131	0/0:17,0:17:48.16:0,48,1540
chr10	72544122	.	A	AT	685.97	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.573;DP=622;FS=0.000;HRun=7;HaplotypeScore=57.3640;InbreedingCoeff=0.9914;MQ=77.15;MQ0=0;MQRankSum=-1.012;QD=21.44;ReadPosRankSum=1.128;VQSLOD=3.1655;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,26:32:66.16:781,66,0	0/0:8,0:8:21.02:0,21,197	0/0:20,0:19:40.58:0,41,370	0/0:15,0:15:42.02:0,42,391	0/0:34,0:34:81.11:0,81,776	0/0:30,0:30:78.12:0,78,753	0/0:19,0:19:54.07:0,54,515	0/0:36,0:36:96.13:0,96,920	0/0:20,0:20:60.10:0,60,579	0/0:22,0:22:60.09:0,60,576	0/0:17,0:17:51.08:0,51,492	0/0:22,0:22:60.09:0,60,579	0/0:28,0:28:75.07:0,75,716	0/0:21,0:21:60.10:0,60,579	0/0:28,0:28:75.10:0,75,718	0/0:21,0:21:63.10:0,63,608	0/0:12,0:12:33.02:0,33,311	0/0:20,0:20:48.05:0,48,456	0/0:13,0:13:36.06:0,36,348	0/0:24,0:24:63.10:0,63,608	0/0:26,0:26:69.08:0,69,660	0/0:18,0:18:48.06:0,48,458	0/0:16,0:16:39.06:0,39,376	0/0:14,0:14:42.07:0,42,406	0/0:32,0:32:87.14:0,87,840	0/0:36,0:36:89.97:0,90,848	0/0:31,0:31:87.14:0,87,840	0/0:7,0:7:21.03:0,21,203
chr10	72544571	.	A	AT	1390.55	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.748;DP=631;FS=1.147;HRun=9;HaplotypeScore=59.9443;InbreedingCoeff=0.9940;MQ=75.90;MQ0=1;MQRankSum=-3.263;QD=23.18;ReadPosRankSum=2.008;VQSLOD=4.5841;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,30:36:75.20:830,75,0	0/0:9,0:9:20.99:0,21,182	0/0:22,0:22:42.14:0,42,356	0/0:16,0:14:19.91:0,20,157	0/0:36,0:36:89.91:0,90,769	0/0:25,0:25:71.96:0,72,620	0/0:18,0:18:38.98:0,39,339	0/0:30,0:30:65.90:0,66,558	0/0:18,0:18:41.99:0,42,365	0/0:32,0:32:51.63:0,52,609	0/0:26,0:26:38.55:0,39,493	0/0:18,0:18:47.97:0,48,413	0/0:22,0:22:59.95:0,60,516	0/0:24,0:24:62.96:0,63,542	0/0:18,0:18:53.99:0,54,469	0/0:20,0:20:56.98:0,57,495	0/0:38,0:38:92.95:0,93,807	1/1:3,21:24:63.13:683,63,0	0/0:24,1:25:29.70:0,30,469	0/0:24,0:24:62.98:0,63,547	0/0:26,0:26:65.94:0,66,564	0/0:23,0:23:62.97:0,63,545	0/0:25,0:25:65.96:0,66,570	0/0:13,0:13:29.97:0,30,260	0/0:16,0:16:44.99:0,45,391	0/0:22,0:22:65.97:0,66,568	0/0:16,0:16:44.95:0,45,382	0/0:9,0:9:26.99:0,27,234
chr10	72547272	.	AGAGTTAGTTGAGTCAT	A	7193.72	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.054;DP=706;FS=3.179;HRun=0;HaplotypeScore=297.3807;InbreedingCoeff=0.9975;MQ=77.16;MQ0=0;MQRankSum=-11.389;QD=92.23;ReadPosRankSum=1.371;VQSLOD=4.2493;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,151,10938	0/0:12,0:12:36.12:0,36,2351	0/0:18,0:17:37.59:0,38,1038	0/0:15,0:15:21.06:0,21,742	0/0:18,0:18:48.16:0,48,3524	0/0:29,0:28:87.30:0,87,6451	0/0:27,0:27:78.27:0,78,5958	0/0:38,0:38:99:0,108,7606	0/0:20,0:20:57.20:0,57,4117	1/1:3,21:24:57.15:2090,57,0	1/1:2,15:17:45.15:2124,45,0	0/0:26,0:26:78.27:0,78,5611	0/0:31,0:31:93.32:0,93,6622	0/0:25,0:25:75.24:0,75,5338	0/0:31,0:31:90.31:0,90,5697	0/0:22,0:22:63.20:0,63,4576	1/1:3,17:20:30.10:1420,30,0	0/0:30,0:30:84.29:0,84,6397	0/0:23,0:23:66.21:0,66,3828	0/0:34,0:34:99:0,102,7329	0/0:32,0:32:93.32:0,93,6689	0/0:25,0:25:75.26:0,75,5731	0/0:21,0:21:60.21:0,60,4061	0/0:36,0:36:99:0,105,7763	1/1:3,14:17:33.11:1560,33,0	0/0:30,0:30:87.30:0,87,6451	0/0:26,0:25:78.27:0,78,5881	0/0:7,0:7:21.07:0,21,1387
chr10	72548327	.	G	GA	1318.60	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-5.463;DP=315;FS=3.355;HRun=8;HaplotypeScore=33.1893;InbreedingCoeff=0.9255;MQ=71.72;MQ0=0;MQRankSum=0.034;QD=24.88;ReadPosRankSum=1.137;VQSLOD=3.8932;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.03:0,51,467	0/0:5,0:5:15.01:0,15,137	0/0:13,0:12:17.91:0,18,148	0/0:10,0:10:19.51:0,20,157	0/0:17,0:17:42.01:0,42,384	0/0:11,0:11:24.01:0,24,220	0/0:15,0:15:38.98:0,39,345	0/0:20,0:20:48.02:0,48,439	0/0:7,0:7:18.01:0,18,165	1/1:3,10:13:30.07:334,30,0	1/1:3,17:20:45.56:506,46,0	0/0:11,0:11:24.01:0,24,220	0/0:10,0:10:21:0,21,192	0/0:8,0:8:21:0,21,192	0/0:10,0:10:18.01:0,18,164	0/0:14,0:13:33.01:0,33,302	1/1:0,11:12:35.94:395,36,0	0/0:12,0:12:21.01:0,21,192	0/0:12,0:11:30.02:0,30,274	0/0:11,0:11:33.01:0,33,300	0/0:3,0:3:9:0,9,82	0/0:6,0:6:15:0,15,133	0/0:5,0:5:12:0,12,110	0/0:18,0:18:45.02:0,45,411	1/1:1,7:8:21.06:242,21,0	0/0:10,0:10:24:0,24,220	0/0:13,0:13:33.01:0,33,302	0/0:2,0:2:6:0,6,55
chr10	72549735	.	T	TG	2702.17	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-10.391;DP=716;FS=0.000;HRun=5;HaplotypeScore=69.8534;InbreedingCoeff=0.9991;MQ=93.54;MQ0=0;MQRankSum=-0.944;QD=29.37;ReadPosRankSum=0.837;VQSLOD=4.0214;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,1050	0/0:13,0:13:36.09:0,36,387	0/0:27,0:27:69.02:0,69,709	0/0:35,0:35:86.29:0,86,903	0/0:33,0:33:96.23:0,96,1024	0/0:24,0:24:56.50:0,57,588	0/0:23,0:23:66.16:0,66,703	0/0:32,0:32:96.19:0,96,996	0/0:24,0:24:69.17:0,69,741	1/1:4,25:29:75.20:952,75,0	1/1:4,23:27:57.10:726,57,0	0/0:22,0:22:60.13:0,60,636	0/0:26,0:26:69.15:0,69,733	0/0:37,0:37:99:0,105,1120	0/0:44,0:44:99:0,114,1217	0/0:31,0:31:90.21:0,90,958	1/1:1,13:14:36.12:474,36,0	0/0:10,0:10:30.04:0,30,310	0/0:14,0:14:36.09:0,36,387	0/0:30,0:30:84.21:0,84,902	0/0:29,0:28:78.19:0,78,831	0/0:18,0:18:51.13:0,51,548	0/0:13,0:13:36.09:0,36,387	0/0:28,0:28:75.19:0,75,806	1/1:0,22:22:54.18:711,54,0	0/0:24,0:24:66.17:0,66,709	0/0:38,0:38:99:0,111,1170	0/0:13,0:13:24.06:0,24,258
chr10	72550586	.	ATATC	A	538.54	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=0.751;DP=294;FS=3.538;HRun=0;HaplotypeScore=51.4329;InbreedingCoeff=0.2966;MQ=72.35;MQ0=8;MQRankSum=-0.379;QD=8.29;ReadPosRankSum=1.356;VQSLOD=1.5608;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:18:6.02:85,6,0	0/0:3,0:3:6.01:0,6,98	0/0:13,0:8:20.99:0,21,189	0/0:30,0:20:22.53:0,23,330	0/0:5,0:5:9.45:0,9,73	0/0:8,0:8:14.94:0,15,117	0/0:9,0:9:24.01:0,24,359	0/0:23,0:22:43.36:0,43,549	0/0:7,0:7:17.97:0,18,147	0/1:13,0:12:10.96:219,0,11	1/1:5,0:5:5.99:49,6,0	0/0:10,0:8:17.94:0,18,171	0/0:9,0:9:26.94:0,27,239	0/0:9,0:9:23.94:0,24,250	0/0:5,0:5:9.46:0,9,76	0/0:9,0:9:24.01:0,24,336	0/1:10,0:10:27.41:70,0,27	0/1:12,0:11:34.38:142,0,34	0/0:13,0:12:33:0,33,395	0/0:8,0:8:14.98:0,15,124	0/0:17,0:16:33.79:0,34,369	0/0:2,0:2:3.01:0,3,41	0/0:12,0:11:26.94:0,27,218	0/0:8,0:7:11.99:0,12,118	0/1:7,0:6:10.03:108,0,10	0/0:10,0:10:28.63:0,29,391	0/0:9,0:9:24.02:0,24,337	0/0:10,0:8:20.97:0,21,282
chr10	72550629	.	T	TCTC	179.98	PASS	AB=1.000;AC=17;AF=0.327;AN=52;BaseQRankSum=1.707;DP=229;FS=2.545;HRun=0;HaplotypeScore=44.9740;InbreedingCoeff=0.2986;MQ=49.59;MQ0=32;MQRankSum=-0.544;QD=2.19;ReadPosRankSum=-0.917;VQSLOD=0.9935;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:34.58:0,35,328	0/1:3,0:3:6:6,0,40	0/0:7,0:3:4.20:0,4,29	0/0:9,0:4:8.99:0,9,78	./.	0/0:6,0:6:6.01:0,6,62	0/0:7,0:6:11.94:0,12,106	0/0:16,0:12:29.73:0,30,247	0/0:7,0:7:5.18:0,5,56	0/1:8,0:4:2.07:2,0,6	0/1:3,0:1:0:0,0,0	1/1:6,0:9:0.59:55,1,0	1/1:1,0:3:3.01:59,3,0	0/0:9,0:7:15.03:0,15,164	0/0:3,0:2:6.01:0,6,57	0/0:6,0:6:12.01:0,12,135	0/1:12,0:14:28.78:29,0,116	1/1:6,0:5:7.42:39,7,0	0/1:9,0:6:9.71:10,0,115	./.	0/0:14,0:12:20.30:0,20,211	1/1:1,3:5:5.96:45,6,0	0/1:4,0:1:0:0,0,0	1/1:1,6:6:3.01:68,3,0	0/0:4,0:6:4.27:0,4,27	0/1:7,0:6:3.24:3,0,163	0/0:12,0:11:2.31:0,2,116	0/0:9,0:6:14.96:0,15,147
chr10	72551554	.	CTT	C	738.24	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.548;DP=344;FS=0.000;HRun=13;HaplotypeScore=44.1575;InbreedingCoeff=0.8069;MQ=68.46;MQ0=10;MQRankSum=2.013;QD=15.07;ReadPosRankSum=3.159;VQSLOD=1.6912;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:42.59:0,43,580	0/0:2,0:2:6.02:0,6,86	0/0:12,0:7:9.03:0,9,114	0/0:8,0:6:2.96:0,3,19	0/0:9,0:10:20.50:0,21,245	0/0:19,0:20:44.64:0,45,617	0/0:9,0:10:27.09:0,27,376	0/0:41,0:41:99:0,113,1458	0/0:14,0:14:30.10:0,30,434	1/1:4,6:10:18:174,18,0	1/1:2,9:12:14.93:195,15,0	0/0:8,0:8:21.07:0,21,304	0/0:12,0:12:30.06:0,30,401	0/0:11,0:12:26.58:0,27,355	0/0:8,0:8:21.04:0,21,279	0/0:12,0:12:24.02:0,24,324	1/1:6,13:18:36.02:349,36,0	0/0:15,0:13:32.56:0,33,420	0/0:15,0:16:36.47:0,36,454	0/0:6,0:7:8.97:0,9,82	0/0:7,0:7:12.04:0,12,167	0/0:1,0:1:3.01:0,3,43	0/0:2,0:2:5.98:0,6,63	0/0:7,0:7:15.02:0,15,195	1/1:0,8:8:18.03:175,18,0	0/0:19,0:18:45.14:0,45,627	0/0:15,0:14:30.06:0,30,397	0/0:9,0:7:15.04:0,15,194
chr10	72553499	.	TTG	T	135.28	PASS	AB=0.943;AC=14;AF=0.269;AN=52;BaseQRankSum=3.703;DP=789;FS=18.313;HRun=0;HaplotypeScore=102.1673;InbreedingCoeff=0.0525;MQ=68.45;MQ0=30;MQRankSum=-1.754;QD=0.45;ReadPosRankSum=-0.432;VQSLOD=0.5262;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:34,1:33:17.42:17,0,144	0/0:11,0:10:15.03:0,15,187	./.	./.	0/0:27,1:27:32.81:0,33,403	0/1:17,1:17:19.80:20,0,87	0/0:42,0:38:20.40:0,20,243	0/0:34,0:33:24.17:0,24,231	0/0:23,0:23:0.92:0,1,160	0/0:14,2:13:2.98:0,3,22	0/0:20,0:19:2.88:0,3,15	0/0:28,0:36:21.06:0,21,263	0/0:31,0:31:23.09:0,23,381	0/1:38,3:40:40.64:41,0,388	0/1:33,4:37:2.63:3,0,354	0/1:34,7:41:27.10:27,0,329	0/1:23,0:22:9.07:26,0,9	1/1:6,0:13:8.52:42,9,0	0/1:22,1:22:23.57:24,0,75	1/1:24,0:23:2.98:22,3,0	0/0:45,0:45:9.30:0,9,379	0/0:20,0:20:14.96:0,15,164	0/0:21,0:21:14.92:0,15,186	0/0:32,0:30:18.03:0,18,398	1/1:19,0:18:5.85:46,6,0	0/0:28,0:27:0.14:0,0,158	0/1:23,0:23:11.91:12,0,162	0/0:11,0:10:6.02:0,6,84
chr10	72553529	.	GTGTGTGTGTGTGTCTGTC	G	956.67	PASS	AB=0.719;AC=7;AF=0.125;AN=56;BaseQRankSum=4.495;DP=742;FS=0.756;HRun=0;HaplotypeScore=266.5402;InbreedingCoeff=0.4106;MQ=50.96;MQ0=34;MQRankSum=1.155;QD=7.47;ReadPosRankSum=-0.111;VQSLOD=2.3615;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:41:99:208,0,899	0/0:8,0:7:18.06:0,18,1192	0/0:9,0:3:5.94:0,6,41	0/0:15,0:1:3.01:0,3,60	0/0:25,0:24:60.19:0,60,2443	0/0:18,0:17:41.99:0,42,844	0/0:32,0:28:56.86:0,57,1380	0/0:33,0:32:72.35:0,72,1080	0/0:32,0:30:72.23:0,72,2608	1/1:23,0:20:34.77:481,35,0	0/1:5,12:16:10.94:83,0,11	0/0:41,0:37:66.65:0,67,1611	0/0:34,0:34:91.78:0,92,3145	0/0:47,0:44:90.03:0,90,3314	0/0:39,0:39:81.73:0,82,2564	0/0:40,0:40:83.04:0,83,2768	0/1:5,15:19:39.56:79,0,40	0/0:20,0:18:13.75:0,14,529	0/0:13,0:11:25.62:0,26,522	0/0:19,0:17:21.07:0,21,847	0/0:46,0:46:81.67:0,82,2675	0/0:20,0:19:39.56:0,40,875	0/0:19,0:18:39.13:0,39,1395	0/0:38,0:34:66.23:0,66,2522	1/1:4,20:23:6.02:242,6,0	0/0:30,0:28:74.05:0,74,2450	0/0:29,0:29:66.14:0,66,2290	0/0:7,0:4:7.27:0,7,213
chr10	72553541	.	GTCTGTC	G	1261	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=6.128;DP=705;FS=1.794;HRun=0;HaplotypeScore=136.8040;InbreedingCoeff=0.1893;MQ=51.63;MQ0=31;MQRankSum=-0.127;QD=7.83;ReadPosRankSum=0.303;VQSLOD=2.7315;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:35:35.02:820,0,35	0/0:9,0:8:24.05:0,24,570	0/0:4,0:2:2.96:0,3,19	0/1:10,0:6:0.38:0,0,164	0/0:21,0:20:45.14:0,45,844	0/0:15,0:14:2.70:0,3,362	0/0:28,0:25:51.56:0,52,745	0/0:41,0:40:61.94:0,62,918	0/0:32,0:30:75.25:0,75,1406	1/1:10,11:18:0.61:415,1,0	0/1:16,0:15:25.79:28,0,26	0/0:40,0:36:74.77:0,75,1051	0/0:33,0:33:22.32:0,22,1330	0/0:41,0:38:52.51:0,53,1345	0/0:34,0:34:72.83:0,73,1295	0/0:37,0:37:55.95:0,56,1318	0/1:20,0:19:20.53:53,0,21	0/0:24,0:22:29.27:0,29,464	0/0:15,0:11:0.51:0,1,339	0/0:14,0:15:24.08:0,24,443	0/0:39,0:39:56.83:0,57,1041	0/0:16,0:15:26:0,26,392	0/0:20,0:19:41.82:0,42,566	0/0:37,0:35:26.69:0,27,948	1/1:24,0:23:5.85:65,6,0	0/1:32,0:30:0.67:1,0,1060	0/0:27,0:27:24.52:0,25,933	0/0:12,0:9:24.08:0,24,349
chr10	72554290	.	TCG	T	833.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.353;DP=701;FS=4.533;HRun=0;HaplotypeScore=79.5223;InbreedingCoeff=0.9045;MQ=78.09;MQ0=0;MQRankSum=-3.843;QD=33.35;ReadPosRankSum=0.863;VQSLOD=5.6088;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:57.19:929,57,0	0/0:17,0:17:51.16:0,51,992	0/0:15,0:15:45.06:0,45,791	0/0:17,0:17:47.37:0,47,818	0/0:29,0:29:87.29:0,87,1725	0/0:26,0:26:78.27:0,78,1535	0/0:27,0:27:81.25:0,81,1571	0/0:28,0:28:81.26:0,81,1531	0/0:24,0:24:72.22:0,72,1376	0/0:36,0:36:99:0,108,2102	0/0:23,0:23:66.23:0,66,1312	0/0:23,0:23:66.17:0,66,1226	0/0:32,0:32:96.22:0,96,1788	0/0:31,0:31:93.28:0,93,1765	0/0:29,0:29:87.27:0,87,1689	0/0:27,0:27:81.28:0,81,1624	0/0:31,0:31:93.30:0,93,1831	0/0:26,0:26:78.23:0,78,1481	0/0:18,0:18:50.61:0,51,1029	0/0:38,0:38:99:0,114,2199	0/0:28,0:28:84.26:0,84,1582	0/0:29,0:29:87.26:0,87,1681	0/0:24,0:24:72.21:0,72,1412	0/0:26,0:26:75.26:0,75,1521	0/0:19,0:19:57.15:0,57,1067	0/0:28,0:28:84.20:0,84,1620	0/0:23,0:23:69.21:0,69,1326	0/0:2,0:2:5.96:0,6,44
chr10	72566536	.	TA	T	3021.04	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.829;DP=549;FS=3.771;HRun=4;HaplotypeScore=49.7658;InbreedingCoeff=0.9523;MQ=64.00;MQ0=0;MQRankSum=1.293;QD=29.33;ReadPosRankSum=1.885;VQSLOD=3.3605;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.09:0,54,711	0/0:10,0:10:30.08:0,30,389	0/0:4,0:3:9.03:0,9,126	0/0:3,0:3:6.02:0,6,79	0/0:36,0:36:99:0,108,1479	0/0:28,0:28:75.22:0,75,1015	0/0:13,0:13:30.06:0,30,367	0/0:38,0:38:99:0,108,1454	0/0:10,0:10:30.10:0,30,420	1/1:1,31:32:93.27:1094,93,0	1/1:1,30:31:81.12:936,81,0	0/0:18,0:18:54.12:0,54,717	0/0:13,0:13:36.12:0,36,504	0/0:25,0:25:75.23:0,75,1017	0/0:27,0:27:81.26:0,81,1116	0/0:18,0:18:51.17:0,51,714	1/1:0,14:14:36.01:431,36,0	0/0:23,0:23:66.22:0,66,922	0/0:9,0:9:21.06:0,21,278	0/0:26,0:26:75.25:0,75,1050	0/0:11,0:11:33.08:0,33,441	0/0:12,0:12:36.11:0,36,488	0/0:16,0:16:48.15:0,48,654	0/0:6,0:6:18.06:0,18,252	1/1:3,23:26:60.18:720,60,0	0/0:27,0:27:81.27:0,81,1134	0/0:32,0:32:96.30:0,96,1310	0/0:20,0:20:57.18:0,57,780
chr10	72567186	.	CT	C	733.92	PASS	AB=0.859;AC=7;AF=0.125;AN=56;BaseQRankSum=6.430;DP=557;FS=5.882;HRun=12;HaplotypeScore=59.9027;InbreedingCoeff=0.4188;MQ=60.22;MQ0=8;MQRankSum=0.859;QD=6.80;ReadPosRankSum=3.961;VQSLOD=1.9089;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,31:37:45.92:598,46,0	0/0:11,1:12:3.75:0,4,208	0/0:20,0:10:10.63:0,11,102	0/0:20,0:12:8.42:0,8,54	0/0:29,0:32:65.47:0,65,602	0/0:13,0:14:1.62:0,2,211	0/1:15,3:17:16.42:16,0,213	0/0:28,2:30:6.46:0,6,400	0/0:14,0:14:32.95:0,33,311	0/0:24,1:25:36.70:0,37,528	0/1:11,2:13:4.32:4,0,135	0/0:17,0:17:30.05:0,30,298	0/0:21,0:23:50.85:0,51,477	0/0:12,0:12:22.83:0,23,235	0/0:23,0:22:51.09:0,51,507	0/0:11,0:11:33.07:0,33,335	0/0:20,0:20:47.98:0,48,457	1/1:3,13:16:29.87:232,30,0	0/0:21,1:23:12.46:0,12,332	0/0:17,0:17:33.02:0,33,319	0/0:19,0:19:35.94:0,36,324	0/0:12,0:12:20.99:0,21,194	0/0:19,1:18:12.82:0,13,302	0/0:23,1:25:30.13:0,30,527	0/0:22,2:25:25.63:0,26,404	0/0:25,1:27:42.02:0,42,619	0/1:19,2:23:19.39:19,0,217	0/0:6,0:6:11.99:0,12,113
chr10	72575182	.	TA	T	3857.19	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.614;DP=585;FS=4.141;HRun=3;HaplotypeScore=53.3068;InbreedingCoeff=0.9794;MQ=86.66;MQ0=0;MQRankSum=-2.179;QD=31.62;ReadPosRankSum=1.901;VQSLOD=3.5621;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.18:0,54,777	0/0:11,0:11:30.08:0,30,398	0/0:25,0:25:69.16:0,69,892	0/0:13,0:13:34.84:0,35,430	0/0:38,0:38:99:0,111,1561	0/0:19,0:19:54.17:0,54,759	0/0:10,0:10:30.10:0,30,432	0/0:32,0:32:87.24:0,87,1186	0/0:13,0:13:39.10:0,39,523	1/1:1,23:24:69.22:855,69,0	1/1:3,27:30:72.22:886,72,0	0/0:16,0:16:48.16:0,48,691	0/0:22,0:22:63.20:0,63,889	0/0:19,0:19:57.12:0,57,779	0/0:19,0:19:57.19:0,57,821	0/0:23,0:23:69.23:0,69,994	1/1:0,20:20:42.13:518,42,0	1/1:0,24:24:69.22:854,69,0	0/0:25,0:25:66.20:0,66,916	0/0:31,0:31:90.30:0,90,1294	0/0:21,0:21:63.19:0,63,871	0/0:20,0:20:54.64:0,55,753	0/0:24,0:24:72.19:0,72,995	0/0:11,0:11:33.11:0,33,475	1/1:0,24:24:60.19:744,60,0	0/0:14,1:15:7.95:0,8,568	0/0:32,0:31:96.31:0,96,1355	0/0:5,0:5:15.05:0,15,216
chr10	72575872	.	CAGAGAG	C	736.53	PASS	AB=0.882;AC=15;AF=0.313;AN=48;BaseQRankSum=3.983;DP=414;FS=1.025;HRun=0;HaplotypeScore=103.1435;InbreedingCoeff=0.5633;MQ=68.73;MQ0=11;MQRankSum=-3.928;QD=6.09;ReadPosRankSum=0.983;VQSLOD=2.0475;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:15:3.37:0,3,41	0/0:8,0:8:8.94:0,9,184	./.	0/0:34,0:13:0.47:0,0,1	1/1:16,0:20:3.01:42,3,0	0/0:12,0:13:8.80:0,9,231	0/0:11,0:11:2.68:0,3,96	./.	1/1:5,0:10:6.13:32,6,0	1/1:9,6:16:10.63:221,11,0	1/1:5,6:12:9.03:163,9,0	0/0:15,0:16:30.10:0,30,820	0/1:13,1:15:39.33:39,0,439	1/1:6,0:11:1.77:4,2,0	0/0:8,0:9:12.04:0,12,281	0/0:12,0:14:12.04:0,12,270	1/1:12,6:18:18.06:344,18,0	./.	0/0:23,0:24:12.07:0,12,360	0/0:16,0:16:18.06:0,18,518	0/0:9,0:9:6.02:0,6,160	0/0:9,0:10:8.99:0,9,229	0/0:10,0:13:3.48:0,3,39	0/0:12,0:13:12.04:0,12,322	1/1:15,2:18:3.48:43,3,0	0/0:13,0:12:6.01:0,6,99	0/0:10,0:12:17.05:0,17,417	./.
chr10	72578729	.	GGCTAA	G	5680.44	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.522;DP=662;FS=1.387;HRun=0;HaplotypeScore=123.6974;InbreedingCoeff=0.9987;MQ=89.04;MQ0=0;MQRankSum=-3.348;QD=55.15;ReadPosRankSum=3.879;VQSLOD=5.4667;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.20:0,57,1813	0/0:7,0:7:21.07:0,21,661	0/0:18,0:18:51.18:0,51,1618	0/0:32,0:32:93.32:0,93,2698	0/0:37,0:37:99:0,108,3376	0/0:26,0:25:78.27:0,78,2373	0/0:25,0:25:72.25:0,72,2281	0/0:30,0:29:90.31:0,90,2762	0/0:21,0:21:63.22:0,63,1996	1/1:2,30:32:90.31:2001,90,0	1/1:1,22:23:54.19:1204,54,0	0/0:16,0:16:48.16:0,48,1473	0/0:17,0:17:51.18:0,51,1616	0/0:22,0:22:63.21:0,63,2005	0/0:20,0:20:60.21:0,60,1859	0/0:20,0:20:57.19:0,57,1822	1/1:1,24:25:45.15:1004,45,0	0/0:11,0:11:30.10:0,30,903	0/0:25,0:25:75.24:0,75,2264	0/0:30,0:30:87.30:0,87,2780	0/0:26,0:26:75.26:0,75,2397	0/0:34,0:34:95.88:0,96,3021	0/0:30,0:30:90.31:0,90,2742	0/0:20,0:20:60.20:0,60,1835	1/1:0,23:23:66.23:1472,66,0	0/0:31,0:30:93.32:0,93,2834	0/0:29,0:29:84.27:0,84,2542	0/0:13,0:13:39.13:0,39,1247
chr10	72580327	.	TC	T	14435.13	PASS	AC=54;AF=1.000;AN=54;DP=473;FS=0.000;HRun=4;HaplotypeScore=150.9532;InbreedingCoeff=-0.0016;MQ=53.76;MQ0=0;QD=30.52;VQSLOD=3.0555;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:18:45.03:479,45,0	1/1:0,8:8:24.07:283,24,0	1/1:0,4:4:12:106,12,0	./.	1/1:1,28:29:78.23:908,78,0	1/1:2,17:19:51.15:595,51,0	1/1:1,6:7:17.99:193,18,0	1/1:10,20:30:66.09:727,66,0	1/1:2,12:14:39.09:442,39,0	1/1:3,36:39:99:1309,111,0	1/1:0,21:20:57.17:667,57,0	1/1:3,11:14:39.11:452,39,0	1/1:1,21:22:66.16:759,66,0	1/1:1,11:12:32.97:342,33,0	1/1:2,13:15:42.13:500,42,0	1/1:4,17:21:54.02:586,54,0	1/1:1,14:15:45.07:511,45,0	1/1:1,12:13:39.05:444,39,0	1/1:2,8:10:27.07:311,27,0	1/1:6,15:20:48.10:547,48,0	1/1:4,11:14:36.01:397,36,0	1/1:1,7:8:24.07:273,24,0	1/1:2,15:17:48.13:556,48,0	1/1:2,8:10:27.03:303,27,0	1/1:3,18:21:57.15:665,57,0	1/1:8,17:25:66.13:748,66,0	1/1:6,25:31:81.13:903,81,0	1/1:0,14:14:36.11:428,36,0
chr10	72580336	.	AC	A	17108.17	PASS	AB=0.600;AC=53;AF=0.946;AN=56;BaseQRankSum=0.903;DP=455;FS=9.855;HRun=1;HaplotypeScore=134.9977;InbreedingCoeff=0.4707;MQ=58.10;MQ0=0;MQRankSum=-2.984;QD=37.68;ReadPosRankSum=2.908;VQSLOD=3.3120;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:42.14:575,42,0	1/1:1,8:9:24.08:324,24,0	0/1:2,4:6:7.74:152,0,8	0/0:1,0:1:2.68:0,3,11	1/1:1,25:26:72.23:954,72,0	1/1:0,18:18:51.16:671,51,0	1/1:0,4:4:12.04:164,12,0	1/1:0,24:24:72.24:991,72,0	1/1:0,17:17:48.16:655,48,0	1/1:0,38:38:99:1540,111,0	1/1:3,16:18:54.15:694,54,0	1/1:0,16:16:39.13:541,39,0	1/1:0,22:22:63.21:864,63,0	1/1:0,10:10:30.10:414,30,0	1/1:1,15:16:42.13:561,42,0	1/1:0,22:22:51.17:695,51,0	1/1:2,15:17:48.16:656,48,0	1/1:0,12:12:36.12:497,36,0	1/1:0,10:10:30.10:403,30,0	1/1:1,20:20:54.09:695,54,0	1/1:1,10:11:33.11:453,33,0	1/1:0,8:8:21.07:280,21,0	1/1:2,15:17:51.14:650,51,0	1/1:1,8:9:27.09:373,27,0	1/1:0,20:20:57.19:780,57,0	1/1:0,22:22:66.21:900,66,0	1/1:1,25:26:78.25:1044,78,0	1/1:3,14:17:42.14:584,42,0
chr10	72580690	.	G	GTA	1389.88	PASS	AB=0.991;AC=30;AF=0.536;AN=56;BaseQRankSum=-10.870;DP=532;FS=5.227;HRun=0;HaplotypeScore=219.1552;InbreedingCoeff=-0.3580;MQ=77.01;MQ0=0;MQRankSum=12.323;QD=2.80;ReadPosRankSum=-1.445;VQSLOD=2.2261;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:15.49:39,0,15	0/1:12,0:12:14.71:40,0,15	0/1:18,3:21:99:100,0,411	0/1:15,1:16:3.10:3,0,287	0/1:34,0:34:33.19:40,0,33	0/1:27,0:27:27.49:27,0,31	0/1:16,0:16:7.02:26,0,7	1/1:30,0:30:64.12:300,64,0	0/1:14,0:14:20.52:92,0,21	1/1:24,0:24:1.21:70,1,0	0/0:19,0:18:2.55:0,3,50	0/1:18,0:18:28.27:97,0,28	0/1:21,0:21:38.53:39,0,62	0/1:17,0:17:8.61:32,0,9	1/1:32,0:32:6.91:173,7,0	1/1:23,0:23:17.69:102,18,0	0/1:12,0:12:5.57:13,0,6	0/0:4,0:4:0.10:0,0,26	1/1:21,0:21:19.54:123,20,0	0/1:20,0:20:16.13:60,0,16	0/1:22,0:22:7.68:38,0,8	0/1:8,0:8:5.48:20,0,5	0/1:21,0:21:1.19:1,0,57	0/0:12,0:12:3.76:0,4,33	0/1:18,0:18:4.59:48,0,5	0/1:25,0:25:6.19:50,0,6	0/1:24,0:24:2.52:3,0,50	0/1:6,0:6:3.08:3,0,38
chr10	72581697	.	TTCC	T	4441.44	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.174;DP=737;FS=4.083;HRun=0;HaplotypeScore=105.8194;InbreedingCoeff=0.9952;MQ=66.18;MQ0=7;MQRankSum=-0.575;QD=27.25;ReadPosRankSum=2.563;VQSLOD=4.6874;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,38:47:46.07:1193,46,0	0/0:13,0:13:24.08:0,24,492	0/0:31,0:19:27.97:0,28,477	0/0:33,0:22:21.08:0,21,544	0/0:27,0:27:60.20:0,60,1172	0/0:21,0:21:54.17:0,54,1055	0/0:12,0:12:30.09:0,30,566	0/0:33,0:33:42.14:0,42,844	0/0:25,0:25:28.98:0,29,1081	1/1:7,24:31:75.24:1072,75,0	1/1:3,21:24:57.14:771,57,0	0/0:34,0:34:84.27:0,84,1659	0/0:28,0:28:55:0,55,1153	0/0:22,0:22:54.18:0,54,1072	0/0:33,0:33:75.26:0,75,1527	0/0:23,0:23:48.16:0,48,982	1/1:5,14:19:21.96:308,22,0	1/1:6,10:15:29.97:408,30,0	0/0:19,0:18:42.14:0,42,799	0/0:25,0:25:57.20:0,57,1154	0/0:43,0:43:99:0,102,2080	0/0:26,0:26:60.19:0,60,1128	0/0:19,0:19:45.15:0,45,911	0/0:39,0:39:99:0,105,2144	1/1:4,22:26:48.16:691,48,0	0/0:22,0:22:16.53:0,17,1030	0/0:35,0:34:75.23:0,75,1462	0/0:11,0:11:33.11:0,33,660
chr10	72582769	.	TG	T	12098.47	PASS	AB=0.583;AC=51;AF=0.944;AN=54;BaseQRankSum=-1.476;DP=504;FS=6.786;HRun=1;HaplotypeScore=101.0433;InbreedingCoeff=0.4467;MQ=42.56;MQ0=95;MQRankSum=-1.613;QD=26.02;ReadPosRankSum=0.213;VQSLOD=4.3040;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:13:24.08:335,24,0	1/1:2,8:8:18.06:251,18,0	0/0:21,1:2:2.04:0,2,6	./.	1/1:4,23:23:39:497,39,0	1/1:8,14:13:36.12:502,36,0	1/1:1,5:5:8.99:103,9,0	1/1:2,30:29:87.22:1159,87,0	1/1:0,14:13:30.06:397,30,0	1/1:5,21:21:57.19:789,57,0	1/1:0,12:11:24.01:303,24,0	1/1:7,15:14:32.95:461,33,0	1/1:1,20:20:57.14:772,57,0	1/1:2,10:8:18.01:228,18,0	1/1:4,20:16:42.07:562,42,0	1/1:3,14:14:27.09:377,27,0	1/1:7,12:12:30.06:392,30,0	0/1:6,15:15:1.87:441,0,2	1/1:2,10:10:27.02:353,27,0	1/1:3,19:18:50.98:640,51,0	1/1:4,6:6:15.05:209,15,0	1/1:4,5:5:14.86:158,15,0	1/1:0,12:11:30.03:394,30,0	1/1:4,7:7:21.07:282,21,0	1/1:4,21:20:57.12:771,57,0	1/1:6,18:19:53.97:722,54,0	1/1:7,22:22:57.19:795,57,0	1/1:3,6:6:15.05:209,15,0
chr10	72583068	.	G	GT	853.32	PASS	AB=0.887;AC=18;AF=0.321;AN=56;BaseQRankSum=2.316;DP=537;FS=3.824;HRun=14;HaplotypeScore=81.4752;InbreedingCoeff=0.0566;MQ=72.42;MQ0=10;MQRankSum=-0.478;QD=2.98;ReadPosRankSum=-2.134;VQSLOD=0.0701;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:47.79:48,0,55	0/0:8,0:8:11.89:0,12,68	0/0:36,0:17:15.55:0,16,83	0/0:40,0:17:6.73:0,7,51	0/1:18,3:21:15.06:15,0,155	0/0:15,0:15:9.86:0,10,129	0/1:22,2:24:5.44:5,0,189	0/1:36,3:39:65.21:65,0,166	0/1:13,0:13:28.95:29,0,73	1/1:3,12:15:29.58:220,30,0	0/1:7,4:11:11.10:134,0,11	0/0:13,0:12:23.50:0,23,150	0/0:20,3:24:4.76:0,5,151	0/1:15,0:15:18.97:19,0,58	0/1:11,1:12:0.49:0,0,114	0/1:18,1:22:16.47:16,0,115	0/1:5,16:21:11.44:158,0,11	1/1:11,1:14:23.15:131,23,0	0/1:12,2:14:0.77:1,0,114	0/0:21,1:20:6.96:0,7,162	0/0:9,1:11:19.86:0,20,116	0/0:11,0:11:23.62:0,24,152	0/0:12,0:12:21.24:0,21,132	0/0:23,0:23:14.37:0,14,176	1/1:3,13:19:20.97:170,21,0	0/0:18,0:18:20.26:0,20,134	0/1:18,3:22:9.38:9,0,188	0/0:11,0:12:25.66:0,26,159
chr10	72583088	.	C	CT	320.12	PASS	AB=0.847;AC=6;AF=0.107;AN=56;BaseQRankSum=1.678;DP=534;FS=4.132;HRun=10;HaplotypeScore=63.9860;InbreedingCoeff=0.3530;MQ=57.76;MQ0=27;MQRankSum=-4.204;QD=3.52;ReadPosRankSum=0.907;VQSLOD=-0.3605;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:6,13:18:0.48:200,0,0	0/0:5,0:5:11.73:0,12,92	0/0:53,0:8:11.81:0,12,84	0/0:47,0:15:7.90:0,8,40	0/0:22,0:23:40.35:0,40,295	0/1:10,2:12:8:8,0,148	0/0:22,0:20:38.82:0,39,309	0/1:28,2:30:27.89:28,0,294	0/0:14,0:14:38.94:0,39,319	0/1:16,0:16:12.42:12,0,207	0/0:13,0:12:25.75:0,26,189	0/0:13,0:12:17.32:0,17,128	0/0:26,0:26:48.30:0,48,381	0/0:15,0:15:23.36:0,23,219	0/0:12,0:12:26.91:0,27,217	0/0:16,0:16:26.89:0,27,218	0/0:20,0:20:20.82:0,21,162	1/1:10,4:14:22.22:197,22,0	0/0:17,0:16:38.90:0,39,315	0/0:18,0:15:23.64:0,24,176	0/0:11,0:11:14.94:0,15,123	0/0:7,0:7:14.97:0,15,123	0/0:12,0:12:17.90:0,18,148	0/0:22,0:22:44.84:0,45,355	0/0:21,0:18:17.49:0,17,184	0/0:21,0:19:20.85:0,21,320	0/0:23,0:23:53.64:0,54,419	0/0:9,0:8:8.97:0,9,74
chr10	72588251	.	CA	C	1872.09	PASS	AB=0.848;AC=10;AF=0.179;AN=56;BaseQRankSum=9.621;DP=632;FS=0.885;HRun=10;HaplotypeScore=70.1910;InbreedingCoeff=0.7191;MQ=67.03;MQ0=12;MQRankSum=0.268;QD=14.74;ReadPosRankSum=2.322;VQSLOD=4.1006;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:91.27:0,91,1044	0/1:3,1:4:17.03:17,0,57	0/0:52,0:17:28.35:0,28,244	0/0:50,0:14:18.66:0,19,150	0/0:30,3:33:18.12:0,18,862	0/0:19,0:19:45.07:0,45,483	0/0:18,0:18:45.12:0,45,496	0/0:35,1:36:63.99:0,64,890	0/0:17,1:18:19.07:0,19,437	1/1:4,23:27:68.97:595,69,0	1/1:0,14:14:38.99:338,39,0	0/0:28,0:28:66.17:0,66,721	0/0:13,0:13:39.09:0,39,418	0/0:21,0:21:51.07:0,51,541	0/0:16,0:17:47.96:0,48,512	0/0:13,0:14:32.91:0,33,339	1/1:5,30:35:77.97:677,78,0	0/0:18,0:18:26.21:0,26,392	0/0:21,0:19:50.91:0,51,517	0/0:28,0:28:75.13:0,75,795	0/0:16,0:16:45.11:0,45,491	0/0:14,0:14:39.09:0,39,423	0/0:18,0:19:25.52:0,26,440	0/0:12,0:12:30.06:0,30,321	1/1:2,18:21:19.85:390,20,0	0/1:23,3:25:24.03:24,0,437	0/0:17,0:17:48.09:0,48,506	0/0:1,0:1:3.01:0,3,33
chr10	72588463	.	A	AC	855.28	PASS	AB=0.799;AC=8;AF=0.143;AN=56;BaseQRankSum=0.941;DP=487;FS=8.245;HRun=0;HaplotypeScore=63.6475;InbreedingCoeff=0.4484;MQ=66.18;MQ0=4;MQRankSum=0.934;QD=7.31;ReadPosRankSum=5.503;VQSLOD=2.5130;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,21:30:4.53:231,0,5	0/0:3,0:3:8.32:0,8,50	0/0:42,0:13:23.15:0,23,175	0/0:31,0:11:11.49:0,11,99	0/0:20,0:20:48.50:0,48,386	0/0:13,0:13:34.14:0,34,248	0/0:8,0:8:20.92:0,21,195	0/0:26,0:26:65.50:0,66,589	0/0:16,0:16:35.90:0,36,287	1/1:19,0:19:29.49:318,29,0	0/1:15,0:14:42.11:91,0,42	0/0:9,0:9:17.78:0,18,128	0/0:16,0:15:39.03:0,39,294	0/0:16,0:16:42.14:0,42,318	0/0:15,0:14:29.20:0,29,221	0/0:18,0:18:50.17:0,50,444	1/1:17,0:17:22.48:115,22,0	0/1:11,12:25:12.07:165,0,12	0/0:15,0:15:44.98:0,45,414	0/0:24,0:24:63.44:0,63,492	0/0:11,0:11:23.37:0,23,211	0/0:13,0:13:31.95:0,32,240	0/0:10,0:10:26.88:0,27,216	0/0:14,0:13:22.09:0,22,198	0/1:11,0:11:20.66:82,0,21	0/0:21,0:21:54.47:0,54,450	0/0:26,0:26:67.10:0,67,499	0/0:3,0:3:8.19:0,8,53
chr10	72589114	.	T	TG	448.71	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.307;DP=616;FS=0.935;HRun=7;HaplotypeScore=64.6829;InbreedingCoeff=0.9949;MQ=90.16;MQ0=0;MQRankSum=-0.839;QD=20.40;ReadPosRankSum=0.668;VQSLOD=3.1304;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:22:45.14:544,45,0	0/0:12,0:12:33.05:0,33,319	0/0:31,0:30:59.79:0,60,533	0/0:28,1:29:25.05:0,25,478	0/0:25,0:25:72.10:0,72,690	0/0:23,0:23:66.11:0,66,637	0/0:19,0:19:48.02:0,48,449	0/0:25,0:25:54.05:0,54,509	0/0:12,0:12:36.06:0,36,347	0/0:22,0:22:60.10:0,60,579	0/0:18,0:18:51.08:0,51,493	0/0:25,0:25:69.11:0,69,666	0/0:23,0:23:57.08:0,57,550	0/0:25,0:25:69.09:0,69,661	0/0:29,0:29:75.12:0,75,724	0/0:36,0:36:99:0,102,985	0/0:20,0:20:57.09:0,57,550	0/0:11,0:11:27.04:0,27,261	0/0:16,0:16:42.02:0,42,396	0/0:19,0:19:51.08:0,51,492	0/0:31,0:31:78.12:0,78,753	0/0:22,0:22:63.10:0,63,608	0/0:21,0:21:60.10:0,60,579	0/0:18,0:18:45.07:0,45,434	0/0:18,0:18:51.08:0,51,491	0/0:26,0:26:69.09:0,69,661	0/0:30,0:30:78.12:0,78,753	0/0:8,0:8:24.04:0,24,231
chr10	72590480	.	TCTTCCTTCCTTCCTTCCTTC	T	3928.58	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=7.794;DP=579;FS=4.079;HRun=0;HaplotypeScore=291.5151;InbreedingCoeff=0.5579;MQ=59.56;MQ0=3;MQRankSum=-1.636;QD=40.09;ReadPosRankSum=1.121;VQSLOD=1.7516;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:10:58.50:250,0,59	0/0:13,0:13:33.11:0,33,1768	0/0:10,0:4:6.02:0,6,177	0/0:11,0:7:2.06:0,2,8	0/0:29,0:29:72.23:0,72,3885	0/0:27,0:27:63.20:0,63,2621	0/0:16,0:16:36.58:0,37,1614	0/0:33,0:33:57.04:0,57,1882	0/0:15,0:15:42.12:0,42,2014	1/1:25,0:25:54.17:1337,54,0	1/1:1,17:18:33.11:653,33,0	0/0:21,0:21:57.17:0,57,1577	0/0:21,0:20:51.17:0,51,1479	0/0:22,0:22:60.21:0,60,3371	0/0:21,0:21:51.17:0,51,2860	0/0:30,0:30:81.25:0,81,4236	0/1:18,0:17:48.37:661,0,48	0/1:7,0:5:36.29:90,0,36	0/0:15,0:14:24.07:0,24,721	0/0:25,0:25:60.19:0,60,2916	0/0:24,0:24:54.17:0,54,2572	0/0:23,0:23:57.20:0,57,1775	0/0:20,0:19:25.73:0,26,712	0/0:18,0:16:26.58:0,27,762	1/1:20,0:20:45.12:936,45,0	0/0:34,0:34:81.28:0,81,4902	0/0:28,0:28:75.25:0,75,3849	0/0:24,0:22:57.13:0,57,2805
chr10	72590508	.	CCTTCCTTTCTTTCTTTCTTTCTTTCTTTCATT	C	2819.56	PASS	AB=1.000;AC=21;AF=0.389;AN=54;BaseQRankSum=6.874;DP=561;FS=6.779;HRun=0;HaplotypeScore=425.1310;InbreedingCoeff=0.6822;MQ=52.75;MQ0=13;MQRankSum=-1.185;QD=15.75;ReadPosRankSum=1.838;VQSLOD=0.7987;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:7:24.85:166,0,25	0/0:11,0:11:27.09:0,27,1557	1/1:8,0:1:2.04:6,2,0	./.	0/0:38,0:38:99:0,105,4177	0/0:19,0:19:48.06:0,48,1465	0/0:15,0:15:41.88:0,42,676	0/0:34,0:31:75.40:0,75,637	0/0:19,0:19:51.12:0,51,2142	1/1:19,0:19:22.20:196,22,0	0/1:17,0:17:32.63:33,0,45	1/1:20,0:19:47.11:528,47,0	1/1:16,0:15:38.36:696,38,0	0/0:26,0:26:75.17:0,75,2597	0/0:26,0:26:78.21:0,78,2916	0/0:31,0:30:87.18:0,87,3306	0/1:17,0:16:16.18:38,0,16	1/1:6,0:4:4.32:24,4,0	0/0:18,0:17:26.66:0,27,1684	0/0:26,0:26:74.97:0,75,2957	0/0:20,0:20:50.99:0,51,1271	1/1:20,0:19:42.92:670,43,0	1/1:10,12:21:21.49:193,21,0	1/1:16,0:14:17.86:391,18,0	1/1:11,0:11:2.25:74,2,0	0/0:37,0:37:99:0,105,3442	0/0:33,0:33:99:0,99,3523	0/0:20,0:18:51:0,51,1870
chr10	72590574	.	ATTCT	A	1524.87	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=5.436;DP=481;FS=0.596;HRun=0;HaplotypeScore=95.2329;InbreedingCoeff=0.5251;MQ=53.47;MQ0=6;MQRankSum=-2.254;QD=10.10;ReadPosRankSum=0.301;VQSLOD=2.6353;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:1.03:0,1,17	0/1:17,0:17:13.37:13,0,608	0/0:9,0:4:9:0,9,124	0/0:4,0:3:8.89:0,9,105	0/0:35,0:35:66.21:0,66,1340	0/0:15,0:15:39.13:0,39,793	0/1:15,0:15:20.12:20,0,422	0/0:37,0:34:45.11:0,45,730	0/0:20,0:20:48.15:0,48,945	1/1:14,1:15:42.11:621,42,0	1/1:8,4:11:20.93:258,21,0	0/0:14,0:14:7.97:0,8,41	0/1:18,0:18:11.36:11,0,30	0/0:18,0:18:42.14:0,42,842	0/0:15,0:15:27.09:0,27,571	0/0:26,0:25:54.17:0,54,1142	1/1:10,0:10:27.09:384,27,0	1/1:10,0:9:9.34:275,9,0	0/0:18,0:14:33.11:0,33,702	0/0:26,0:26:48.15:0,48,989	0/0:7,0:7:12.04:0,12,247	0/0:2,0:2:0:0,0,0	1/1:18,0:18:2.21:14,2,0	0/0:14,0:12:8.97:0,9,72	1/1:0,14:14:6.02:96,6,0	0/0:24,0:24:48.16:0,48,950	0/0:36,0:35:34.53:0,35,1474	0/1:22,0:20:4.33:4,0,898
chr10	72590674	.	TCTTC	T	2810.92	PASS	AB=0.892;AC=10;AF=0.179;AN=56;BaseQRankSum=8.014;DP=663;FS=6.004;HRun=0;HaplotypeScore=113.7873;InbreedingCoeff=0.5032;MQ=58.62;MQ0=2;MQRankSum=3.056;QD=16.63;ReadPosRankSum=-0.704;VQSLOD=2.9919;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:35.64:0,36,257	0/0:8,0:8:21.02:0,21,212	0/0:19,0:12:19.19:0,19,129	0/0:19,0:11:7.70:0,8,71	0/0:34,0:34:87.13:0,87,1399	0/1:19,0:19:28.15:28,0,192	0/0:16,0:16:15.08:0,15,188	0/0:30,0:28:53.65:0,54,438	0/0:24,0:24:63.04:0,63,841	1/1:4,31:35:69.19:1242,69,0	1/1:14,5:19:48.02:635,48,0	0/0:24,0:23:57.05:0,57,825	0/0:22,0:22:47.42:0,47,481	0/0:26,0:26:44.94:0,45,490	0/0:32,0:32:87.09:0,87,1265	0/0:31,0:31:78.08:0,78,1165	0/1:8,25:32:12.94:288,0,13	1/1:14,3:17:29.99:475,30,0	0/0:19,0:18:17.92:0,18,370	0/0:25,0:25:71.93:0,72,1066	0/0:16,0:15:42.10:0,42,791	0/1:24,0:24:99:106,0,218	0/0:25,0:25:60.47:0,60,788	0/0:25,0:26:63.26:0,63,800	0/1:22,0:22:99:200,0,104	0/0:34,0:34:77.75:0,78,1538	0/0:29,0:29:78.92:0,79,1108	0/0:16,0:14:33.03:0,33,560
chr10	72590686	.	C	CCTTT	518.83	PASS	AB=1.000;AC=7;AF=0.135;AN=52;BaseQRankSum=0.852;DP=649;FS=16.439;HRun=0;HaplotypeScore=126.0768;InbreedingCoeff=0.6244;MQ=56.62;MQ0=8;MQRankSum=-3.044;QD=6.18;ReadPosRankSum=-0.675;VQSLOD=1.5731;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:5.60:0,6,39	1/1:7,0:7:6.01:78,6,0	./.	./.	0/0:29,0:29:35.76:0,36,476	0/0:16,0:16:12.02:0,12,132	0/0:15,0:16:14.51:0,15,101	0/0:26,0:23:2.87:0,3,17	0/0:26,0:26:29.99:0,30,349	0/0:36,0:35:59.80:0,60,538	0/0:21,0:21:38.98:0,39,407	0/0:27,0:26:48.02:0,48,545	0/1:27,0:27:12.28:12,0,83	1/1:14,14:28:6.02:140,6,0	0/0:30,0:30:36.06:0,36,464	0/0:30,0:30:42.04:0,42,518	0/0:29,0:28:18.05:0,18,194	0/0:21,0:21:23.89:0,24,200	0/0:21,0:16:12.02:0,12,146	0/0:27,0:27:36.02:0,36,421	0/0:17,0:16:30.06:0,30,397	0/0:19,0:23:29.80:0,30,246	0/0:25,0:25:30.05:0,30,379	0/0:25,0:25:2.39:0,2,356	1/1:22,0:22:21.07:418,21,0	0/0:35,0:36:57.11:0,57,721	0/0:31,0:31:36.03:0,36,442	0/0:13,0:13:20.91:0,21,235
chr10	72590730	.	T	TCTTC	1136.51	PASS	AB=0.925;AC=10;AF=0.179;AN=56;BaseQRankSum=2.019;DP=617;FS=0.000;HRun=0;HaplotypeScore=125.3352;InbreedingCoeff=0.2572;MQ=55.54;MQ0=9;MQRankSum=0.875;QD=6.31;ReadPosRankSum=-1.753;VQSLOD=2.0973;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:18.60:0,19,284	0/1:5,0:5:13.86:14,0,69	0/0:16,0:9:20.05:0,20,182	0/0:10,0:6:6.22:0,6,117	0/0:35,0:35:87.04:0,87,991	0/0:8,0:8:16.57:0,17,177	0/0:20,0:20:29:0,29,299	0/0:26,0:19:32.95:0,33,294	0/0:21,0:21:51.04:0,51,648	0/0:35,0:35:58.77:0,59,824	0/0:22,0:22:59.99:0,60,669	0/1:31,0:30:97.52:220,0,98	0/1:5,20:27:14.08:44,0,14	0/1:26,0:26:71.17:71,0,180	0/0:22,0:22:51.05:0,51,610	0/0:25,0:25:66.55:0,67,803	0/0:26,0:26:45.58:0,46,487	0/0:18,0:17:45.02:0,45,510	0/0:13,0:12:31.86:0,32,351	0/0:27,0:26:63:0,63,702	0/0:17,0:16:42.07:0,42,582	1/1:25,0:25:26.69:298,27,0	0/1:18,0:18:84.34:120,0,84	0/1:25,0:25:71.75:253,0,72	1/1:23,0:23:21.06:272,21,0	0/0:37,0:37:94.97:0,95,1158	0/0:29,0:29:74.95:0,75,842	0/0:10,0:10:11.18:0,11,174
chr10	72591900	.	AACAC	A	792.91	PASS	AB=0.886;AC=11;AF=0.212;AN=52;BaseQRankSum=-0.743;DP=651;FS=2.717;HRun=0;HaplotypeScore=149.6667;InbreedingCoeff=0.5802;MQ=57.67;MQ0=15;MQRankSum=0.101;QD=4.43;ReadPosRankSum=0.361;VQSLOD=2.0313;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:63:80.05:0,80,1386	0/0:5,0:8:5.29:0,5,24	./.	./.	0/0:15,0:15:17.76:0,18,233	0/0:26,0:26:33.03:0,33,645	0/0:25,0:26:23.62:0,24,437	0/0:18,0:17:11.75:0,12,114	0/0:12,0:16:26.30:0,26,459	0/0:25,0:25:27.98:0,28,486	0/0:21,0:20:24.08:0,24,414	1/1:12,5:18:8.73:112,9,0	1/1:13,10:25:12.75:252,13,0	0/0:20,0:20:41.99:0,42,722	0/1:24,1:26:7.57:8,0,510	0/0:21,0:23:44.32:0,44,757	0/0:26,0:26:27.09:0,27,457	0/0:17,0:17:33.11:0,33,603	0/0:15,0:14:24.07:0,24,456	0/0:19,0:19:30.10:0,30,644	0/0:47,0:47:56.19:0,56,749	1/1:19,8:26:7.22:70,7,0	1/1:9,3:13:6.02:93,6,0	0/1:29,15:45:16.08:403,0,16	0/0:21,0:21:20.10:0,20,303	0/1:24,0:22:3.44:3,0,412	0/0:18,1:21:10.56:0,11,419	0/0:5,0:6:11.74:0,12,97
chr10	72591920	.	C	CAT	1355.13	PASS	AB=0.735;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.380;DP=681;FS=5.031;HRun=0;HaplotypeScore=134.6729;InbreedingCoeff=0.2237;MQ=54.61;MQ0=18;MQRankSum=3.625;QD=6.99;ReadPosRankSum=0.744;VQSLOD=3.1816;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:67,0:67:88.01:88,0,485	0/0:7,0:7:14.90:0,15,118	0/0:16,0:6:14.80:0,15,107	0/0:15,0:3:5.95:0,6,43	0/0:18,0:17:38.94:0,39,378	0/0:27,0:27:33.56:0,34,536	0/0:27,0:27:71.79:0,72,657	0/0:26,0:25:74.66:0,75,602	0/0:17,0:17:41.83:0,42,459	1/1:7,20:27:25.45:602,25,0	0/1:5,16:20:19.63:206,0,20	0/0:19,0:19:33.50:0,34,232	0/0:24,0:24:43.94:0,44,316	0/0:22,0:21:42.82:0,43,584	0/0:31,0:31:74.37:0,74,676	0/0:25,0:25:44.28:0,44,587	0/1:7,25:33:22.24:310,0,22	0/0:18,0:17:33.07:0,33,171	0/0:16,0:14:39.27:0,39,363	0/0:21,0:21:53.68:0,54,561	0/0:47,0:44:99:0,100,907	0/0:24,0:23:41.59:0,42,300	0/0:18,0:18:41.75:0,42,320	0/0:42,0:41:48.04:0,48,398	0/1:4,16:22:5.31:266,0,5	0/1:24,0:22:20.09:20,0,390	0/0:23,0:22:36.33:0,36,467	0/0:4,0:4:11.99:0,12,110
chr10	72593429	.	AT	A	1304.10	PASS	AB=0.852;AC=14;AF=0.250;AN=56;BaseQRankSum=10.529;DP=523;FS=1.434;HRun=13;HaplotypeScore=66.0123;InbreedingCoeff=0.7493;MQ=71.09;MQ0=0;MQRankSum=-0.503;QD=9.88;ReadPosRankSum=4.051;VQSLOD=3.1516;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,17:24:10.50:240,10,0	0/0:8,2:10:2.10:0,2,175	0/1:17,2:15:28.04:28,0,39	0/1:9,3:10:13.70:24,0,14	0/0:23,1:27:43.80:0,44,538	0/0:23,0:28:56.92:0,57,535	0/0:15,1:16:20.15:0,20,350	0/0:29,0:29:60.08:0,60,575	0/0:21,1:23:22.44:0,22,372	1/1:5,13:19:35.24:248,35,0	1/1:3,15:20:35.28:341,35,0	0/0:15,1:16:11.07:0,11,254	0/0:18,0:18:32.06:0,32,432	0/0:12,2:14:7.87:0,8,220	0/0:20,1:21:31.93:0,32,435	0/0:18,0:18:51.05:0,51,481	1/1:1,11:12:29.82:218,30,0	1/1:1,7:8:17.89:131,18,0	0/0:14,0:19:35.33:0,35,273	0/0:30,1:36:64.60:0,65,693	0/0:9,0:9:21.01:0,21,195	0/0:13,0:15:41.84:0,42,375	0/0:16,0:16:35.93:0,36,335	0/0:20,1:21:32.17:0,32,470	1/1:4,14:18:35.76:263,36,0	0/0:19,0:19:39.04:0,39,370	0/0:29,1:30:61.98:0,62,704	0/0:6,0:6:15.02:0,15,146
chr10	72594001	.	A	AC	11258.02	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-17.419;DP=640;FS=2.070;HRun=1;HaplotypeScore=55.8389;InbreedingCoeff=0.9982;MQ=91.97;MQ0=0;MQRankSum=-3.899;QD=41.85;ReadPosRankSum=3.167;VQSLOD=5.3159;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:60.20:899,60,0	0/0:6,0:6:18.06:0,18,234	0/0:32,0:32:81.21:0,81,986	0/0:20,0:20:48.20:0,48,592	0/0:26,0:26:75.21:0,75,945	0/0:24,0:24:69.18:0,69,864	0/0:20,0:20:57.17:0,57,727	0/0:28,0:28:81.24:0,81,1016	0/0:28,0:28:78.25:0,78,1013	1/1:1,25:26:78.25:1149,78,0	1/1:1,24:25:75.25:1119,75,0	1/1:0,27:27:78.26:1168,78,0	1/1:0,27:27:72.24:1079,72,0	0/0:21,0:21:63.20:0,63,818	0/0:20,0:20:57.17:0,57,726	0/0:16,0:16:48.16:0,48,623	1/1:0,24:24:69.23:1034,69,0	1/1:1,7:8:21.06:298,21,0	0/0:16,0:16:48.13:0,48,607	0/0:31,0:31:93.30:0,93,1207	0/0:24,0:24:69.20:0,69,880	1/1:0,33:33:93.19:1365,93,0	1/1:0,24:24:69.23:1034,69,0	1/1:2,25:27:72.24:1079,72,0	1/1:0,24:23:69.23:1034,69,0	0/0:15,0:15:45.15:0,45,584	0/0:33,0:33:96.29:0,96,1218	0/0:11,0:11:30.10:0,30,389
chr10	72594428	.	AACC	A	723.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.574;DP=649;FS=5.094;HRun=0;HaplotypeScore=89.4660;InbreedingCoeff=0.9986;MQ=88.11;MQ0=0;MQRankSum=-3.032;QD=42.58;ReadPosRankSum=1.722;VQSLOD=5.3065;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,2450	0/0:9,0:9:27.08:0,27,579	0/0:26,0:26:74.83:0,75,1522	0/0:22,0:22:60.21:0,60,1292	0/0:25,0:25:75.26:0,75,1677	0/0:26,0:26:75.25:0,75,1668	0/0:29,0:29:81.28:0,81,1867	0/0:29,0:29:72.25:0,72,1623	0/0:15,0:15:39.13:0,39,881	0/0:27,0:27:78.26:0,78,1738	0/0:18,0:18:54.17:0,54,1201	0/0:27,0:27:81.28:0,81,1867	0/0:37,0:37:99:0,108,2455	0/0:21,0:21:63.22:0,63,1434	0/0:28,0:28:84.29:0,84,1928	0/0:24,0:24:72.25:0,72,1623	0/0:22,0:22:66.23:0,66,1513	1/1:0,17:17:48.16:819,48,0	0/0:24,0:24:63.22:0,63,1410	0/0:32,0:32:96.33:0,96,2168	0/0:22,0:22:66.23:0,66,1515	0/0:17,0:17:51.16:0,51,1133	0/0:25,0:25:75.24:0,75,1616	0/0:21,0:21:60.21:0,60,1377	0/0:27,0:27:81.27:0,81,1826	0/0:16,0:16:45.15:0,45,981	0/0:16,0:16:48.16:0,48,1098	0/0:11,0:11:33.11:0,33,692
chr10	72595887	.	AT	A	2789.32	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.010;DP=607;FS=0.000;HRun=11;HaplotypeScore=63.4738;InbreedingCoeff=0.9265;MQ=68.47;MQ0=1;MQRankSum=0.323;QD=18.00;ReadPosRankSum=0.790;VQSLOD=4.5987;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,33:36:86.89:714,87,0	0/0:5,0:5:12.03:0,12,128	0/0:16,0:12:20.27:0,20,199	0/0:17,0:10:11.81:0,12,90	0/0:37,2:41:30.96:0,31,894	0/0:10,1:14:11.15:0,11,292	0/0:9,0:9:24.06:0,24,256	0/0:25,1:27:35.29:0,35,540	0/0:17,0:17:45.10:0,45,472	1/1:5,26:32:77.79:634,78,0	1/1:3,25:29:44.95:564,45,0	0/0:19,0:19:46.50:0,47,509	0/0:20,0:20:53.96:0,54,545	0/0:24,0:24:57.14:0,57,607	0/0:23,1:23:29.41:0,29,505	0/0:13,0:13:33.08:0,33,345	1/1:3,19:22:47.85:394,48,0	1/1:3,19:22:39.56:448,40,0	0/0:22,1:23:35.51:0,36,582	0/0:34,0:34:90.08:0,90,933	0/0:16,0:16:39.08:0,39,407	0/0:14,0:14:36.09:0,36,383	0/0:21,1:22:29.49:0,29,519	0/0:29,1:30:46.57:0,47,685	1/1:3,11:14:0.97:214,1,0	0/0:32,0:32:75.64:0,76,789	0/0:29,0:28:84.13:0,84,873	0/0:6,0:6:15.04:0,15,160
chr10	72598385	.	TTG	T	298.33	PASS	AB=0.954;AC=15;AF=0.288;AN=52;BaseQRankSum=3.303;DP=549;FS=0.000;HRun=0;HaplotypeScore=87.4434;InbreedingCoeff=0.1813;MQ=67.78;MQ0=5;MQRankSum=-0.807;QD=1.39;ReadPosRankSum=0.831;VQSLOD=1.5722;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:49:35.85:0,36,301	0/0:6,0:6:6.01:0,6,67	./.	0/0:20,0:17:0:0,0,0	0/0:23,0:23:18.04:0,18,244	0/0:19,0:18:19.60:0,20,246	0/0:23,0:23:12.02:0,12,153	0/0:22,0:22:4.26:0,4,40	0/0:14,0:14:9.03:0,9,133	1/1:20,3:21:12:118,12,0	1/1:8,3:11:3.01:33,3,0	0/0:10,0:15:2.60:0,3,10	0/1:19,0:18:11.46:11,0,28	0/1:11,2:13:53:53,0,74	0/1:20,4:24:8.49:8,0,214	0/1:17,0:17:20.49:20,0,102	1/1:16,2:19:14.54:122,15,0	0/1:18,0:18:3.16:3,0,190	0/0:13,0:13:9.03:0,9,129	0/0:17,0:17:6.01:0,6,65	0/0:32,0:32:27.02:0,27,329	0/0:11,0:14:0:0,0,0	./.	0/0:25,0:23:2.98:0,3,22	1/1:15,1:17:5.68:46,6,0	0/1:32,0:32:5.99:6,0,169	0/1:21,1:22:23.48:23,0,76	0/0:3,0:3:3.01:0,3,40
chr10	72598964	.	T	TACACAC	1423.89	PASS	AB=0.983;AC=14;AF=0.280;AN=50;BaseQRankSum=1.126;DP=543;FS=9.857;HRun=0;HaplotypeScore=139.4897;InbreedingCoeff=0.6368;MQ=62.41;MQ0=9;MQRankSum=-5.035;QD=9.25;ReadPosRankSum=-0.860;VQSLOD=2.1537;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:29:58.34:58,0,86	./.	./.	./.	0/0:38,0:39:24.80:0,25,371	0/0:21,0:21:21:0,21,367	0/0:18,0:21:11.95:0,12,167	1/1:22,0:22:0.47:1,0,0	0/0:15,0:16:7.29:0,7,697	1/1:25,0:25:27.52:474,28,0	1/1:10,0:10:9.02:133,9,0	0/0:25,0:25:21.84:0,22,400	0/1:14,0:14:2.91:3,0,183	0/0:23,0:23:30.57:0,31,511	0/0:24,0:25:30.09:0,30,521	0/0:19,0:19:15:0,15,213	1/1:7,0:11:6.02:117,6,0	1/1:8,5:13:6.01:122,6,0	0/0:17,0:16:5.95:0,6,45	0/0:15,0:16:12.04:0,12,222	0/0:24,0:23:21.05:0,21,342	0/0:15,0:15:11.07:0,11,173	0/0:16,0:13:15.03:0,15,236	0/0:17,0:18:17.89:0,18,270	1/1:27,2:29:27.09:672,27,0	0/0:16,0:16:3.48:0,3,46	0/0:21,0:20:30.09:0,30,544	0/0:10,0:9:11.93:0,12,186
chr10	72603801	.	A	AT	2702.92	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.945;DP=621;FS=1.229;HRun=11;HaplotypeScore=71.7320;InbreedingCoeff=0.9661;MQ=70.48;MQ0=2;MQRankSum=0.028;QD=16.58;ReadPosRankSum=2.396;VQSLOD=4.7167;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,1:35:48.63:266,49,0	0/0:16,0:16:41.82:0,42,323	0/0:8,0:7:5.97:0,6,46	0/0:14,0:13:21.96:0,22,146	0/0:35,0:36:88.53:0,89,661	0/0:15,0:16:40.84:0,41,302	0/0:15,1:16:11.31:0,11,263	0/0:36,0:36:74.67:0,75,578	0/0:19,0:20:25.94:0,26,330	1/1:5,26:31:57.77:739,58,0	1/1:2,11:13:33.07:335,33,0	0/0:22,0:23:46.83:0,47,371	0/0:18,0:18:44.49:0,44,332	0/0:26,0:27:76.68:0,77,578	0/0:32,1:33:56.19:0,56,617	0/0:26,0:27:61.72:0,62,465	1/1:3,22:25:66.13:669,66,0	1/1:3,1:21:51.09:255,51,0	0/0:21,1:22:14.36:0,14,295	0/0:19,0:19:41.59:0,42,310	0/0:16,0:17:46.85:0,47,354	0/0:19,0:19:50.79:0,51,392	0/0:19,0:19:50.76:0,51,387	0/0:13,0:13:35.84:0,36,275	1/1:10,27:37:29.42:625,29,0	0/0:30,0:30:59.71:0,60,463	0/0:22,0:22:62.71:0,63,482	0/0:7,0:7:20.92:0,21,163
chr10	72604064	.	CCA	C	372.42	PASS	AB=0.878;AC=16;AF=0.286;AN=56;BaseQRankSum=5.298;DP=658;FS=2.080;HRun=0;HaplotypeScore=97.5773;InbreedingCoeff=-0.3136;MQ=62.72;MQ0=7;MQRankSum=1.342;QD=1.05;ReadPosRankSum=2.643;VQSLOD=1.6752;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:21:0.89:2,1,0	0/0:17,0:17:36.12:0,36,547	0/0:35,0:24:17.69:0,18,271	0/0:31,0:21:21.46:0,21,258	0/1:28,5:34:68.07:68,0,785	0/1:19,1:21:21.40:21,0,275	0/0:19,1:21:7.79:0,8,518	0/1:19,2:21:47.63:48,0,165	0/1:23,2:25:8.47:8,0,749	0/0:16,0:21:44.98:0,45,380	0/0:12,0:15:10.90:0,11,83	0/1:22,3:27:34.71:35,0,599	0/1:23,2:25:14.46:14,0,667	0/0:17,1:18:1.89:0,2,453	0/1:26,4:30:14.47:14,0,679	0/1:25,2:28:11.50:12,0,665	0/0:13,0:29:38.50:0,38,336	0/0:15,0:17:31.72:0,32,231	0/1:17,2:19:32.78:33,0,364	0/1:14,3:17:50.37:50,0,378	0/1:13,5:18:81.95:82,0,99	0/1:15,3:19:57.85:58,0,463	0/1:14,3:16:35.61:36,0,335	0/0:27,1:28:28.88:0,29,869	0/0:19,0:32:23.84:0,24,191	0/0:31,2:33:14.43:0,14,511	0/1:24,6:30:42.60:43,0,609	0/0:5,0:5:15.05:0,15,232
chr10	72604475	.	A	AC	7993.15	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-15.093;DP=865;FS=6.187;HRun=1;HaplotypeScore=79.7600;InbreedingCoeff=0.9997;MQ=83.97;MQ0=0;MQRankSum=-1.315;QD=40.17;ReadPosRankSum=4.356;VQSLOD=5.4236;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,49:50:99:2068,138,0	0/0:12,0:12:36.08:0,36,436	0/0:30,0:30:81.25:0,81,1025	0/0:20,0:20:54.17:0,54,684	0/0:37,0:37:99:0,108,1368	0/0:30,0:30:90.28:0,90,1154	0/0:27,0:27:78.23:0,78,985	0/0:33,0:33:99:0,99,1275	0/0:42,0:42:99:0,126,1594	1/1:1,36:37:99:1503,105,0	1/1:0,18:18:45.15:674,45,0	0/0:34,0:34:99:0,102,1277	0/0:34,0:34:99:0,102,1308	0/0:39,0:39:99:0,111,1411	0/0:42,0:42:99:0,126,1622	0/0:46,0:46:99:0,138,1792	1/1:3,45:48:99:1858,126,0	1/1:0,22:22:63.21:943,63,0	0/0:27,0:26:75.22:0,75,939	0/0:25,0:25:69.21:0,69,882	0/0:46,0:46:99:0,135,1753	0/0:31,0:31:93.20:0,93,1170	0/0:13,0:13:36.11:0,36,455	0/0:29,0:29:87.27:0,87,1114	1/1:0,24:24:69.03:947,69,0	0/0:21,0:21:57.18:0,57,729	0/0:39,0:39:99:0,117,1488	0/0:9,0:9:27.09:0,27,350
chr10	72607366	.	T	TTC	1455.44	PASS	AB=0.752;AC=6;AF=0.107;AN=56;BaseQRankSum=1.728;DP=725;FS=15.805;HRun=0;HaplotypeScore=154.5201;InbreedingCoeff=-0.0572;MQ=63.54;MQ0=18;MQRankSum=-2.152;QD=9.21;ReadPosRankSum=1.105;VQSLOD=2.7364;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,18:29:34.83:60,0,35	0/0:3,0:3:9.03:0,9,142	0/0:56,0:22:39.06:0,39,600	0/0:70,0:26:23.51:0,24,582	0/0:21,0:21:51.04:0,51,772	0/0:26,0:26:63.15:0,63,917	0/0:17,0:17:43.81:0,44,581	0/0:23,0:23:57.19:0,57,867	0/0:29,0:29:69.01:0,69,1019	0/1:18,8:22:99:299,0,176	0/1:24,1:25:46.27:370,0,46	0/0:22,0:21:46.94:0,47,579	0/0:26,0:22:47.84:0,48,555	0/0:21,0:21:54.14:0,54,767	0/0:34,0:34:96.29:0,96,1468	0/0:32,0:32:78.11:0,78,1112	0/1:6,19:23:11.09:151,0,11	0/1:5,6:11:46.08:46,0,75	0/0:19,0:19:41.87:0,42,598	0/0:27,0:27:69.15:0,69,981	0/0:29,0:29:75.23:0,75,1132	0/0:18,0:17:18.03:0,18,232	0/0:10,0:10:18.06:0,18,273	0/0:19,0:19:20.41:0,20,245	0/1:37,2:36:8.14:654,0,8	0/0:26,0:26:64.39:0,64,948	0/0:35,0:35:96.25:0,96,1442	0/0:4,0:4:12.02:0,12,168
chr10	72607544	.	TA	T	2841.11	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.193;DP=596;FS=3.939;HRun=10;HaplotypeScore=56.6649;InbreedingCoeff=0.9162;MQ=65.13;MQ0=0;MQRankSum=0.915;QD=19.73;ReadPosRankSum=2.126;VQSLOD=4.7427;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:65.98:573,66,0	0/0:12,0:12:27.07:0,27,299	0/0:9,0:8:2.92:0,3,64	0/0:6,0:5:12:0,12,112	0/0:37,1:38:58.18:0,58,862	0/0:22,0:22:66.18:0,66,730	0/0:21,0:21:60.14:0,60,647	0/0:40,0:40:99:0,108,1186	0/0:33,0:33:87.16:0,87,928	1/1:3,19:22:56.86:484,57,0	1/1:7,18:25:53.96:466,54,0	0/0:12,1:13:7.04:0,7,304	0/0:22,1:23:34.84:0,35,593	0/0:17,0:17:45.07:0,45,470	0/0:24,2:26:8.07:0,8,545	0/0:21,0:21:57.15:0,57,630	1/1:3,19:22:53.99:469,54,0	1/1:0,17:17:44.99:391,45,0	0/0:13,0:13:30.06:0,30,316	0/0:31,0:31:63.16:0,63,689	0/0:18,0:18:51.11:0,51,552	0/0:9,0:9:21.06:0,21,232	0/0:18,0:19:49.21:0,49,515	0/0:11,0:12:26.91:0,27,280	1/1:7,26:33:48.21:644,48,0	0/0:27,0:27:66.17:0,66,717	0/0:28,1:29:55.12:0,55,816	0/0:13,0:13:8.75:0,9,263
chr10	72609328	.	CT	C	8899.37	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=13.550;DP=599;FS=1.352;HRun=2;HaplotypeScore=61.5744;InbreedingCoeff=0.9845;MQ=81.66;MQ0=0;MQRankSum=-2.281;QD=36.18;ReadPosRankSum=3.705;VQSLOD=5.3966;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,45:46:99:1500,117,0	0/0:2,0:2:6.02:0,6,90	0/0:12,0:13:24.71:0,25,367	0/0:21,0:21:44.96:0,45,659	0/0:28,0:28:84.28:0,84,1257	0/0:28,0:28:78.26:0,78,1169	0/0:21,0:21:63.18:0,63,900	0/0:32,0:32:96.32:0,96,1419	0/0:22,0:22:63.21:0,63,943	1/1:0,26:26:78.25:1013,78,0	1/1:0,21:21:60.20:779,60,0	1/1:0,22:22:57.19:740,57,0	1/1:0,28:28:81.26:1051,81,0	0/0:18,0:18:54.17:0,54,787	0/0:17,0:17:51.17:0,51,765	0/0:24,0:24:72.24:0,72,1078	1/1:0,25:25:69.22:896,69,0	1/1:0,13:13:36.12:467,36,0	0/0:17,0:17:51.17:0,51,752	0/0:23,0:23:66.22:0,66,971	0/0:18,0:18:54.18:0,54,809	1/1:0,14:14:42.14:545,42,0	1/1:0,20:20:57.08:740,57,0	1/1:0,14:14:39.13:506,39,0	1/1:0,17:17:51.17:662,51,0	0/0:31,0:31:90.30:0,90,1331	0/0:30,0:30:90.29:0,90,1330	0/0:8,0:8:24.08:0,24,360
chr10	72609556	.	CTGTG	C	537.59	PASS	AB=0.922;AC=25;AF=0.500;AN=50;BaseQRankSum=3.533;DP=534;FS=0.961;HRun=0;HaplotypeScore=92.1810;InbreedingCoeff=0.4336;MQ=55.14;MQ0=25;MQRankSum=-2.915;QD=1.85;ReadPosRankSum=2.880;VQSLOD=1.5444;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:34:2.74:28,3,0	0/0:4,0:5:11.78:0,12,206	./.	./.	1/1:12,0:15:2.98:22,3,0	0/1:20,0:21:11.23:11,0,405	0/0:22,0:21:15.04:0,15,277	0/0:24,0:24:2.37:0,2,8	1/1:15,10:25:15.05:229,15,0	0/1:6,0:9:1.70:2,0,22	0/0:10,0:11:1.27:0,1,4	0/0:18,0:17:18.06:0,18,377	0/0:13,0:19:9.03:0,9,173	1/1:11,5:16:3.01:46,3,0	0/0:14,0:14:9.02:0,9,155	0/0:19,0:19:17.81:0,18,394	1/1:17,0:26:5.91:44,6,0	0/1:15,0:15:20.36:20,0,43	./.	1/1:9,2:11:3:46,3,0	0/1:26,0:26:0:0,0,0	0/1:15,0:15:0:0,0,0	0/0:9,0:15:3.01:0,3,52	0/0:24,0:34:23.79:0,24,404	1/1:12,0:22:11.49:76,11,0	1/1:22,1:22:3:46,3,0	1/1:17,6:23:6.01:75,6,0	1/1:4,1:3:3.01:46,3,0
chr10	72609559	.	T	TGT	130.61	PASS	AB=1.000;AC=13;AF=0.283;AN=46;BaseQRankSum=0.314;DP=549;FS=1.330;HRun=0;HaplotypeScore=87.8744;InbreedingCoeff=0.1084;MQ=54.47;MQ0=25;MQRankSum=-0.639;QD=0.70;ReadPosRankSum=-0.453;VQSLOD=1.4451;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:34:8.17:17,0,8	0/1:5,0:5:16.09:16,0,37	./.	./.	0/0:16,0:16:0.47:0,0,1	0/1:22,0:21:3.28:3,0,123	0/0:26,0:25:9:0,9,87	1/1:23,0:23:1.25:3,1,0	0/0:23,0:23:14.04:0,14,66	0/1:8,0:8:10.94:11,0,23	0/0:10,0:10:3.01:0,3,30	1/1:15,4:18:5.77:84,6,0	1/1:20,0:20:4.56:43,5,0	0/0:15,0:15:2.84:0,3,14	0/0:15,0:15:6.02:0,6,63	0/0:24,0:23:9.44:0,9,76	0/0:26,0:26:2.84:0,3,14	0/0:15,0:14:0.45:0,0,10	./.	0/0:11,0:11:2.84:0,3,14	./.	./.	1/1:16,0:16:3.01:44,3,0	0/1:38,0:37:31.84:32,0,47	0/0:22,0:21:5.68:0,6,28	0/0:27,0:26:2.84:0,3,14	0/0:23,0:22:5.47:0,5,28	0/0:5,0:3:2.84:0,3,14
chr10	72610752	.	AT	A	69.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.554;DP=593;FS=0.000;HRun=2;HaplotypeScore=55.0156;InbreedingCoeff=0.9554;MQ=71.12;MQ0=0;MQRankSum=-1.243;QD=13.98;ReadPosRankSum=-0.673;VQSLOD=2.4213;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:78.25:0,78,1143	0/0:8,0:8:24.07:0,24,340	0/0:9,0:9:24.08:0,24,345	0/0:7,0:7:18.06:0,18,255	0/0:30,0:30:87.29:0,87,1304	0/0:17,0:17:51.17:0,51,764	0/0:16,0:16:48.16:0,48,718	0/0:39,0:39:99:0,114,1669	0/0:16,0:16:48.16:0,48,719	0/0:26,0:26:78.26:0,78,1145	0/0:22,0:22:66.22:0,66,988	0/0:22,0:22:66.22:0,66,971	0/0:34,0:34:99:0,99,1471	0/0:26,0:26:75.25:0,75,1123	0/0:34,0:34:99:0,99,1464	0/0:24,0:24:72.24:0,72,1079	0/0:25,0:25:75.24:0,75,1093	1/1:0,5:5:12.04:156,12,0	0/0:15,0:15:39.10:0,39,535	0/0:12,0:12:33.10:0,33,476	0/0:20,0:20:60.19:0,60,878	0/0:9,0:9:27.09:0,27,405	0/0:25,0:25:75.25:0,75,1124	0/0:17,0:17:48.16:0,48,720	0/0:31,0:31:93.29:0,93,1372	0/0:27,0:27:78.26:0,78,1151	0/0:32,0:32:96.31:0,96,1418	0/0:18,0:18:54.15:0,54,768
chr10	72612988	.	T	TGA	1395.01	PASS	AB=0.588;AC=7;AF=0.125;AN=56;BaseQRankSum=11.256;DP=579;FS=1.194;HRun=0;HaplotypeScore=94.7910;InbreedingCoeff=0.8258;MQ=63.21;MQ0=0;MQRankSum=-9.664;QD=27.35;ReadPosRankSum=-0.533;VQSLOD=4.5781;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1681	0/0:12,0:12:36.12:0,36,582	0/0:6,0:6:13.97:0,14,154	0/0:6,0:5:15.04:0,15,207	0/0:25,0:25:72.24:0,72,1153	0/0:16,0:16:48.16:0,48,783	0/0:19,0:19:57.19:0,57,922	0/0:37,0:37:99:0,105,1666	0/0:22,0:22:66.23:0,66,1073	1/1:0,10:12:36.12:505,36,0	1/1:0,11:11:28.24:257,28,0	0/0:16,0:16:48.16:0,48,780	0/0:22,0:22:66.21:0,66,1048	0/0:28,0:28:81.28:0,81,1317	0/0:30,0:30:90.31:0,90,1466	0/0:23,0:23:66.23:0,66,1068	0/1:3,7:10:64.46:275,0,64	0/0:17,0:17:51.17:0,51,832	0/0:24,0:24:72.24:0,72,1139	0/0:37,0:37:99:0,108,1726	0/0:20,0:19:57.19:0,57,930	0/0:10,0:10:27.08:0,27,418	0/0:24,0:24:69.23:0,69,1097	0/0:22,0:22:66.23:0,66,1069	1/1:2,16:18:50.89:508,51,0	0/0:32,0:32:93.31:0,93,1495	0/0:36,0:36:99:0,108,1714	0/0:8,0:8:24.08:0,24,392
chr10	72612996	.	TTAA	T	1073.54	PASS	AB=0.588;AC=7;AF=0.125;AN=56;BaseQRankSum=11.566;DP=601;FS=0.000;HRun=0;HaplotypeScore=110.8634;InbreedingCoeff=0.7809;MQ=64.65;MQ0=0;MQRankSum=-9.887;QD=20.65;ReadPosRankSum=1.015;VQSLOD=3.2054;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,2612	0/0:12,0:12:36.11:0,36,783	0/0:7,0:7:2.31:0,2,237	0/0:7,0:6:14.88:0,15,244	0/0:26,0:26:78.27:0,78,1843	0/0:16,0:16:48.16:0,48,1167	0/0:18,0:18:54.14:0,54,1253	0/0:44,0:44:99:0,129,2957	0/0:21,0:21:63.22:0,63,1471	1/1:3,10:13:33.09:378,33,0	1/1:0,11:11:28.69:192,29,0	0/0:19,0:19:57.18:0,57,1262	0/0:23,0:23:69.22:0,69,1556	0/0:27,0:27:81.26:0,81,1869	0/0:36,0:36:99:0,108,2488	0/0:24,0:24:72.25:0,72,1725	0/1:3,7:10:99:201,0,116	0/0:18,0:18:54.19:0,54,1284	0/0:27,0:27:81.28:0,81,1866	0/0:40,0:40:99:0,120,2789	0/0:19,0:18:54.16:0,54,1217	0/0:12,0:12:36.12:0,36,830	0/0:23,0:23:69.24:0,69,1678	0/0:21,0:21:63.22:0,63,1496	1/1:2,16:18:53.45:451,53,0	0/0:31,0:31:93.32:0,93,2221	0/0:34,0:34:99:0,102,2290	0/0:8,0:8:24.08:0,24,517
chr10	72612997	.	TAA	T	987.29	PASS	AB=0.909;AC=7;AF=0.125;AN=56;BaseQRankSum=11.870;DP=608;FS=0.531;HRun=2;HaplotypeScore=100.0370;InbreedingCoeff=0.7958;MQ=65.37;MQ0=0;MQRankSum=-10.196;QD=18.28;ReadPosRankSum=0.280;VQSLOD=1.1482;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,2113	0/0:11,0:11:33.10:0,33,615	0/0:8,0:8:7.12:0,7,255	0/0:7,0:6:8.29:0,8,169	0/0:26,0:26:78.27:0,78,1502	0/0:16,0:16:48.16:0,48,944	0/0:18,0:18:51.17:0,51,984	0/0:44,0:44:99:0,129,2478	0/0:22,0:22:66.23:0,66,1255	1/1:12,1:13:33.07:340,33,0	1/1:12,0:12:34.36:213,34,0	0/0:19,0:19:57.18:0,57,1041	0/0:23,0:23:69.21:0,69,1251	0/0:28,0:28:84.27:0,84,1586	0/0:36,0:36:99:0,108,2054	0/0:24,0:24:72.25:0,72,1399	0/1:9,1:10:87.94:178,0,88	0/0:18,0:18:54.19:0,54,1046	0/0:27,0:27:81.28:0,81,1538	0/0:40,0:40:99:0,120,2255	0/0:19,0:18:51.16:0,51,967	0/0:12,0:12:36.12:0,36,687	0/0:23,0:23:69.24:0,69,1356	0/0:21,0:21:63.22:0,63,1209	1/1:17,2:19:55.67:406,56,0	0/0:32,0:32:96.33:0,96,1864	0/0:35,0:35:99:0,105,1890	0/0:9,0:9:27.02:0,27,446
chr10	72613002	.	T	TA	2317.62	PASS	AB=0.619;AC=7;AF=0.125;AN=56;BaseQRankSum=13.021;DP=625;FS=1.011;HRun=4;HaplotypeScore=92.0485;InbreedingCoeff=0.8350;MQ=70.44;MQ0=0;MQRankSum=-11.348;QD=34.08;ReadPosRankSum=-0.936;VQSLOD=3.4333;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1248	0/0:11,0:11:33.07:0,33,362	0/0:12,0:12:24.38:0,24,263	0/0:10,0:9:20.88:0,21,202	0/0:26,0:26:72.19:0,72,806	0/0:16,0:16:48.14:0,48,545	0/0:16,0:16:45.13:0,45,511	0/0:47,0:47:99:0,120,1344	0/0:24,0:24:69.18:0,69,772	1/1:8,11:19:54.14:686,54,0	1/1:4,12:16:48.11:607,48,0	0/0:17,0:17:51.15:0,51,578	0/0:22,0:22:57.14:0,57,635	0/0:28,0:28:75.21:0,75,851	0/0:35,0:35:99:0,102,1148	0/0:25,0:25:69.19:0,69,782	0/1:5,8:13:28.94:401,0,29	0/0:18,0:18:54.13:0,54,600	0/0:27,0:27:81.23:0,81,919	0/0:40,0:40:99:0,117,1308	0/0:18,0:17:51.15:0,51,578	0/0:12,0:12:33.09:0,33,374	0/0:23,0:23:66.19:0,66,749	0/0:19,0:19:57.16:0,57,647	1/1:2,18:20:60.19:772,60,0	0/0:34,0:34:99:0,102,1148	0/0:29,0:29:87.23:0,87,976	0/0:10,0:10:30.09:0,30,339
chr10	72613535	.	C	CA	2747.91	PASS	AB=0.938;AC=9;AF=0.161;AN=56;BaseQRankSum=1.630;DP=600;FS=0.432;HRun=6;HaplotypeScore=75.6241;InbreedingCoeff=0.8594;MQ=67.86;MQ0=4;MQRankSum=-0.776;QD=22.71;ReadPosRankSum=-1.274;VQSLOD=2.4060;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:38.84:0,39,342	0/0:4,0:4:12.02:0,12,117	0/0:37,0:20:43.62:0,44,431	0/0:35,0:16:39.08:0,39,389	0/0:20,0:20:51.01:0,51,497	0/0:14,0:14:33.07:0,33,336	0/0:23,0:23:51.08:0,51,513	0/0:26,0:25:66.13:0,66,668	0/0:21,0:21:57.11:0,57,573	1/1:18,11:28:78.22:930,78,0	1/1:16,8:22:53.49:582,53,0	0/0:18,0:18:42.09:0,42,428	0/0:19,0:19:54.11:0,54,547	0/0:29,0:29:72.16:0,72,733	0/0:28,0:28:71.79:0,72,711	0/0:17,0:17:50.72:0,51,487	1/1:7,14:20:47.34:541,47,0	0/1:14,1:15:29.02:29,0,279	0/0:11,0:11:26.93:0,27,258	0/0:19,0:19:44.32:0,44,439	0/0:22,0:22:51.07:0,51,510	0/0:19,0:19:54.11:0,54,544	0/0:15,0:15:42.09:0,42,427	0/0:28,0:29:59.14:0,59,608	1/1:23,9:32:71.69:830,72,0	0/0:25,0:25:37.74:0,38,659	0/0:21,0:21:51.09:0,51,510	0/0:7,0:7:21.05:0,21,214
chr10	72613543	.	GGT	G	930.39	PASS	AB=0.968;AC=19;AF=0.365;AN=52;BaseQRankSum=5.337;DP=651;FS=2.262;HRun=0;HaplotypeScore=96.5522;InbreedingCoeff=-0.0798;MQ=61.86;MQ0=8;MQRankSum=1.760;QD=2.35;ReadPosRankSum=1.110;VQSLOD=1.9476;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:30:0,30,300	0/0:5,0:5:2.99:0,3,23	./.	./.	0/1:23,2:25:6.01:6,0,223	0/1:19,0:19:17.27:17,0,130	0/1:20,1:22:17.54:18,0,136	0/0:28,0:27:7.23:0,7,38	0/1:26,0:26:2.31:2,0,295	1/1:33,0:31:27.91:268,28,0	1/1:25,0:23:23.70:199,24,0	0/1:18,0:18:5.91:6,0,205	0/0:18,0:18:3.01:0,3,45	0/0:28,0:28:12.02:0,12,155	0/1:27,1:28:5.53:6,0,327	0/0:20,1:21:3.47:0,3,416	0/1:22,0:21:22.99:137,0,23	0/0:20,0:20:5.32:0,5,230	0/0:10,0:10:12.03:0,12,144	0/1:15,4:19:99:123,0,234	0/1:28,0:28:17.35:17,0,163	0/0:20,0:20:12.03:0,12,158	0/1:22,1:23:65.84:66,0,227	0/1:35,0:35:0.24:0,0,178	1/1:29,0:29:20.93:187,21,0	0/1:25,0:24:13.35:13,0,155	0/1:18,1:19:20.50:21,0,121	0/0:10,0:9:12.03:0,12,153
chr10	72613544	.	GT	G	1199.36	PASS	AB=0.913;AC=9;AF=0.161;AN=56;BaseQRankSum=12.043;DP=678;FS=2.449;HRun=1;HaplotypeScore=91.0204;InbreedingCoeff=0.9032;MQ=60.52;MQ0=8;MQRankSum=0.641;QD=8.95;ReadPosRankSum=-0.031;VQSLOD=0.9576;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:48.07:0,48,541	0/0:4,0:4:12.02:0,12,129	0/0:32,0:15:42.94:0,43,464	0/0:33,0:14:39.08:0,39,431	0/0:27,0:27:49.61:0,50,692	0/0:20,0:20:42.70:0,43,549	0/0:27,0:27:60.50:0,61,699	0/0:29,0:28:75.55:0,76,853	0/0:26,0:26:59.06:0,59,796	1/1:23,13:34:67.26:385,67,0	1/1:15,12:25:47.01:345,47,0	0/0:19,0:19:48.94:0,49,629	0/0:20,0:20:51.08:0,51,624	0/0:28,0:28:75.21:0,75,913	0/0:29,0:29:70.22:0,70,894	0/0:22,0:22:58.36:0,58,766	1/1:18,2:21:9.22:203,9,0	0/1:19,2:20:0.36:0,0,457	0/0:9,0:9:24.08:0,24,330	0/0:20,0:20:30.13:0,30,436	0/0:30,0:30:55.80:0,56,687	0/0:22,0:22:57.16:0,57,691	0/0:24,0:24:35.95:0,36,606	0/0:38,0:38:67.80:0,68,822	1/1:12,16:28:45.03:421,45,0	0/0:25,1:25:31.50:0,32,755	0/0:19,0:19:49.37:0,49,590	0/0:10,0:9:24.08:0,24,324
chr10	72613891	.	GTTT	G	1274.29	PASS	AB=0.600;AC=8;AF=0.143;AN=56;BaseQRankSum=3.622;DP=487;FS=1.206;HRun=16;HaplotypeScore=75.7932;InbreedingCoeff=0.7121;MQ=74.31;MQ0=1;MQRankSum=-1.343;QD=11.69;ReadPosRankSum=5.532;VQSLOD=0.6344;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,9:21:16.10:176,16,0	0/0:6,0:8:21.07:0,21,322	0/0:24,0:21:29.84:0,30,264	0/0:10,0:5:6.01:0,6,59	0/0:20,0:23:48.15:0,48,775	0/0:17,0:21:27.04:0,27,421	0/0:12,0:13:24.06:0,24,364	0/0:36,0:41:68.75:0,69,925	0/0:16,0:17:36.10:0,36,576	0/1:7,13:22:4.81:326,0,5	0/1:8,11:21:11.45:242,0,11	0/0:10,0:12:27.07:0,27,396	0/0:6,0:18:24.54:0,25,341	0/0:16,0:17:43.59:0,44,628	0/0:17,0:17:43.70:0,44,738	0/0:8,0:10:22.26:0,22,273	1/1:7,14:22:37.07:375,37,0	0/0:10,0:18:35.91:0,36,338	0/0:17,0:19:39.07:0,39,528	0/0:16,0:16:30.08:0,30,459	0/0:7,0:8:24.05:0,24,365	0/0:6,0:6:15.03:0,15,197	0/0:11,0:14:36.96:0,37,537	0/0:7,0:7:9.03:0,9,151	1/1:7,10:21:31.22:308,31,0	0/0:22,0:23:54.15:0,54,823	0/0:22,0:22:42.06:0,42,642	0/0:5,0:8:15.01:0,15,174
chr10	72614790	.	G	GGAAAGAAA	3678.34	PASS	AB=0.995;AC=22;AF=0.440;AN=50;BaseQRankSum=4.071;DP=413;FS=9.810;HRun=0;HaplotypeScore=130.6251;InbreedingCoeff=0.3949;MQ=63.44;MQ0=1;MQRankSum=-3.275;QD=14.60;ReadPosRankSum=-4.328;VQSLOD=0.0676;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:9.01:90,9,0	0/0:3,0:3:9.03:0,9,222	./.	./.	0/0:12,0:14:15.05:0,15,350	1/1:2,0:11:14.97:122,15,0	0/1:15,0:15:31.06:98,0,31	./.	0/0:7,0:7:15.05:0,15,369	0/1:29,0:30:99:359,0,387	0/1:23,0:23:35.64:302,0,36	1/1:20,1:21:36.09:933,36,0	1/1:9,4:15:3.01:122,3,0	0/0:15,0:15:27.07:0,27,549	0/0:12,0:12:27.08:0,27,612	0/0:17,0:17:27.09:0,27,639	0/1:12,0:12:74.38:74,0,100	1/1:10,0:10:3.01:77,3,0	0/0:8,0:8:9.03:0,9,193	0/1:22,0:22:5.90:6,0,301	0/0:13,0:13:21.07:0,21,481	1/1:5,11:16:29.89:643,30,0	1/1:13,8:22:9.68:282,10,0	1/1:14,1:16:12.51:256,13,0	0/1:27,0:27:99:315,0,261	0/0:13,0:13:18.06:0,18,405	0/0:17,0:17:18.06:0,18,390	0/0:2,0:2:3.01:0,3,71
chr10	72614852	.	GACGA	G	2050.80	PASS	AB=0.832;AC=7;AF=0.125;AN=56;BaseQRankSum=9.698;DP=286;FS=26.329;HRun=0;HaplotypeScore=113.2078;InbreedingCoeff=0.2475;MQ=55.15;MQ0=1;MQRankSum=-8.479;QD=18.99;ReadPosRankSum=1.790;VQSLOD=1.4962;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:21.19:0,21,190	0/0:2,0:2:3.01:0,3,69	0/0:17,0:13:22.90:0,23,381	0/0:13,0:7:15.04:0,15,241	0/0:7,0:7:21:0,21,468	0/0:7,0:7:21.07:0,21,478	0/0:13,0:13:33.58:0,34,793	0/0:8,0:8:14.54:0,15,278	0/0:5,0:5:12.04:0,12,283	0/1:25,11:36:59.53:783,0,60	1/1:24,4:28:8.42:539,8,0	0/0:13,0:13:30.57:0,31,622	0/0:6,0:6:12.03:0,12,243	0/0:7,0:7:15.05:0,15,357	0/0:9,0:9:18.06:0,18,462	0/0:8,0:8:15.04:0,15,339	0/1:7,2:9:47.99:251,0,48	1/1:4,0:4:2.96:19,3,0	0/0:1,0:1:3.01:0,3,79	0/0:4,0:4:12.04:0,12,309	0/0:5,0:5:6.02:0,6,127	0/0:9,0:9:24.55:0,25,426	0/0:10,0:10:24.94:0,25,392	0/0:12,0:12:26.97:0,27,483	0/1:28,3:30:99:584,0,120	0/0:4,0:4:6.02:0,6,128	0/0:4,0:4:6.02:0,6,113	0/0:1,0:1:3.01:0,3,73
chr10	72614860	.	AACAGAGGGAGGGAGGGAGG	A	5206.08	PASS	AB=0.912;AC=6;AF=0.107;AN=56;BaseQRankSum=8.146;DP=237;FS=9.620;HRun=0;HaplotypeScore=155.0966;InbreedingCoeff=0.1090;MQ=57.25;MQ0=1;MQRankSum=-8.612;QD=53.12;ReadPosRankSum=4.503;VQSLOD=3.3894;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:99:378,0,182	0/0:1,0:1:3.01:0,3,71	0/0:16,0:13:29.98:0,30,543	0/0:8,0:4:12.01:0,12,188	0/0:8,0:8:21.07:0,21,608	0/0:7,0:7:21.04:0,21,507	0/0:11,0:11:33.11:0,33,1058	0/0:5,0:5:13.86:0,14,280	0/0:4,0:4:12.04:0,12,516	0/1:30,2:32:99:1532,0,162	1/1:13,8:21:21.87:1529,22,0	0/0:13,0:13:33.57:0,34,1278	0/0:6,0:6:12.04:0,12,624	0/0:5,0:5:15.04:0,15,420	0/0:7,0:7:20.28:0,20,720	0/0:4,0:4:12.04:0,12,333	0/1:8,1:9:17.94:408,0,18	0/0:3,0:3:2.98:0,3,22	0/0:1,0:1:3.01:0,3,71	0/0:6,0:6:16.87:0,17,478	0/0:2,0:2:6.02:0,6,353	0/0:8,0:8:15.05:0,15,747	0/0:10,0:10:14.59:0,15,879	0/0:9,0:9:27.09:0,27,1399	0/1:19,6:24:59.12:1359,0,59	0/0:2,0:2:6.02:0,6,236	0/0:2,0:2:6.02:0,6,343	0/0:1,0:1:3.01:0,3,282
chr10	72614863	.	AGAGGGAGGGAGGGAGG	A	5674.42	PASS	AC=10;AF=0.208;AN=48;BaseQRankSum=7.779;DP=217;FS=0.729;HRun=0;HaplotypeScore=127.0163;InbreedingCoeff=0.6340;MQ=58.52;MQ0=1;MQRankSum=-6.518;QD=65.98;ReadPosRankSum=1.064;VQSLOD=4.2276;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,4:10:21.07:812,21,0	./.	0/0:17,0:13:2.13:0,2,84	./.	0/0:8,0:8:12:0,12,123	0/0:4,0:4:3.01:0,3,125	0/0:10,0:10:12.01:0,12,283	0/0:5,0:5:1.55:0,2,4	0/0:4,0:4:9.02:0,9,234	1/1:19,10:29:57.17:1626,57,0	1/1:17,3:20:36.12:1472,36,0	0/0:7,0:12:21.07:0,21,664	0/0:6,0:6:9.03:0,9,347	0/0:4,0:4:6.01:0,6,110	0/0:6,0:6:11.25:0,11,316	0/0:4,0:4:3.01:0,3,51	1/1:7,0:7:12.04:434,12,0	./.	./.	0/0:6,0:6:4.83:0,5,129	0/0:3,0:3:3.01:0,3,230	0/0:6,0:8:12.04:0,12,430	0/0:8,0:9:14.95:0,15,552	0/0:3,0:9:24.08:0,24,868	1/1:16,4:20:33.11:1331,33,0	0/0:2,0:2:3.01:0,3,94	0/0:2,0:2:6.02:0,6,231	0/0:1,0:1:3.01:0,3,229
chr10	72616138	.	C	CA	933.73	PASS	AB=0.883;AC=16;AF=0.286;AN=56;BaseQRankSum=-3.112;DP=592;FS=1.060;HRun=14;HaplotypeScore=74.6525;InbreedingCoeff=0.3199;MQ=67.60;MQ0=1;MQRankSum=-1.746;QD=4.60;ReadPosRankSum=-1.481;VQSLOD=1.5183;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:14:17.93:87,18,0	0/1:10,1:11:5.74:6,0,95	0/0:11,0:9:5.22:0,5,20	0/1:12,0:10:0.31:0,0,16	0/0:31,0:33:48.15:0,48,298	0/0:23,0:26:41.29:0,41,247	0/0:20,1:21:23.86:0,24,281	0/0:38,4:45:6:0,6,382	0/1:22,0:24:18.74:19,0,98	0/1:18,8:27:5.70:191,0,6	1/1:7,10:17:10.73:211,11,0	0/0:25,0:25:13.62:0,14,219	0/0:20,0:20:32.27:0,32,210	0/0:10,1:13:4.34:0,4,138	0/0:33,0:33:55.73:0,56,361	0/0:19,0:22:15.16:0,15,203	0/1:3,5:9:8.10:89,0,8	1/1:2,6:9:8.16:100,8,0	0/1:13,3:17:28.08:28,0,83	0/0:31,1:35:45.34:0,45,404	0/0:10,0:11:13.73:0,14,83	0/0:22,0:25:32.49:0,32,190	0/0:14,1:20:31.69:0,32,177	0/0:15,0:15:28.37:0,28,178	1/1:13,12:26:12.25:334,12,0	0/1:16,1:18:33.59:34,0,47	0/0:27,1:33:34.86:0,35,323	0/1:15,1:18:3.79:4,0,98
chr10	72616189	.	T	TTGC	2666.71	PASS	AB=0.950;AC=9;AF=0.161;AN=56;BaseQRankSum=-6.713;DP=549;FS=1.969;HRun=0;HaplotypeScore=81.1470;InbreedingCoeff=0.8828;MQ=75.61;MQ0=0;MQRankSum=-1.000;QD=28.67;ReadPosRankSum=0.854;VQSLOD=3.9157;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:27.09:0,27,391	0/0:7,0:7:18.04:0,18,237	0/0:26,0:26:39.06:0,39,502	0/0:11,0:11:29.65:0,30,361	0/0:28,0:28:63.15:0,63,866	0/0:19,0:19:48.16:0,48,693	0/0:18,0:18:33.08:0,33,456	0/0:32,0:32:57.19:0,57,810	0/0:16,0:16:45.15:0,45,651	1/1:10,10:21:39.13:774,39,0	1/1:7,7:14:21.07:417,21,0	0/0:23,0:23:63.17:0,63,888	0/0:23,0:23:54.18:0,54,781	0/0:24,0:24:63.21:0,63,907	0/0:21,0:21:54.15:0,54,743	0/0:24,0:24:60.20:0,60,865	1/1:4,16:21:54.19:1079,54,0	0/0:14,0:14:33.11:0,33,474	0/0:17,0:17:33.09:0,33,456	0/0:29,0:29:57.19:0,57,823	0/0:23,0:23:57.19:0,57,821	0/0:21,0:21:45.15:0,45,651	0/0:17,0:17:39.11:0,39,538	0/0:14,0:14:36.12:0,36,517	1/1:7,9:18:27.09:553,27,0	0/1:18,1:19:7.26:7,0,667	0/0:27,0:27:75.24:0,75,1065	0/0:10,0:10:30.10:0,30,422
chr10	72622250	.	TAAAA	T	5482.42	PASS	AB=0.917;AC=13;AF=0.232;AN=56;BaseQRankSum=12.978;DP=501;FS=0.861;HRun=4;HaplotypeScore=79.1351;InbreedingCoeff=0.8718;MQ=60.48;MQ0=9;MQRankSum=1.178;QD=35.83;ReadPosRankSum=1.588;VQSLOD=1.6427;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:59.98:1154,60,0	0/0:13,0:13:39.13:0,39,1068	0/0:9,0:5:15.05:0,15,408	0/0:16,0:8:7.43:0,7,132	0/0:33,0:33:97.88:0,98,2663	0/0:17,0:17:51.18:0,51,1403	0/0:12,0:12:33.11:0,33,955	0/0:33,0:31:90.12:0,90,2138	0/0:18,0:18:54.15:0,54,1300	1/1:0,26:26:78.14:1299,78,0	1/1:0,22:22:65.57:975,66,0	0/0:14,0:14:42.12:0,42,1094	0/0:21,0:21:63.10:0,63,1584	0/0:19,0:19:57.17:0,57,1399	0/0:8,0:8:24.06:0,24,564	0/0:28,0:28:84.27:0,84,2275	1/1:0,19:19:45.12:898,45,0	1/1:0,21:21:36.07:697,36,0	0/0:19,0:17:51.07:0,51,1123	0/0:14,0:14:42.11:0,42,1033	0/0:9,0:9:27:0,27,586	0/0:3,0:3:9.03:0,9,261	0/0:12,0:12:33.10:0,33,757	0/0:10,0:10:30.07:0,30,685	1/1:0,16:16:21.07:440,21,0	0/1:20,2:22:19.05:19,0,1232	0/0:25,0:24:72.22:0,72,1911	0/0:15,0:15:45.14:0,45,1181
chr10	72623041	.	AG	A	1343.77	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.697;DP=667;FS=7.617;HRun=1;HaplotypeScore=87.9273;InbreedingCoeff=0.9958;MQ=89.57;MQ0=0;MQRankSum=-12.744;QD=14.14;ReadPosRankSum=2.405;VQSLOD=2.8668;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1856	0/0:15,0:15:45.15:0,45,717	0/0:27,0:27:78.25:0,78,1202	0/0:30,0:30:81.24:0,81,1233	0/0:46,0:46:99:0,138,2178	0/0:22,0:22:60.19:0,60,936	0/0:23,0:23:69.22:0,69,1074	0/0:28,0:28:84.27:0,84,1302	0/0:14,0:14:42.14:0,42,671	0/0:28,0:28:84.27:0,84,1301	0/0:23,0:23:69.22:0,69,1080	1/1:2,15:17:47.51:363,48,0	1/1:0,27:27:71.21:504,71,0	0/0:27,0:27:81.28:0,81,1290	0/0:22,0:22:66.23:0,66,1055	0/0:22,0:22:66.23:0,66,1055	0/0:28,0:28:81.28:0,81,1294	0/0:17,0:17:48.16:0,48,767	0/0:21,0:21:63.18:0,63,979	0/0:14,0:14:42.14:0,42,671	0/0:29,0:29:87.23:0,87,1358	1/1:2,22:24:56.22:374,56,0	1/1:0,12:14:26.65:179,27,0	1/1:0,13:12:14.80:98,15,0	0/0:23,0:23:69.24:0,69,1103	0/0:32,0:32:93.29:0,93,1460	0/0:24,0:24:72.21:0,72,1102	0/0:18,0:18:54.13:0,54,791
chr10	72623043	.	TCTAG	T	2796.35	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.767;DP=666;FS=6.537;HRun=0;HaplotypeScore=123.2461;InbreedingCoeff=0.9917;MQ=90.24;MQ0=0;MQRankSum=-12.935;QD=29.44;ReadPosRankSum=2.093;VQSLOD=3.4212;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,3068	0/0:15,0:15:45.15:0,45,1304	0/0:31,0:31:90.31:0,90,2481	0/0:28,0:28:53.01:0,53,1995	0/0:46,0:46:99:0,138,3850	0/0:22,0:22:60.19:0,60,1566	0/0:22,0:22:66.18:0,66,1596	0/0:27,0:27:81.27:0,81,2216	0/0:15,0:15:45.15:0,45,1296	0/0:27,0:27:81.28:0,81,2252	0/0:22,0:22:66.23:0,66,1861	1/1:2,15:17:51.06:634,51,0	1/1:4,23:27:75.21:1014,75,0	0/0:26,0:26:78.25:0,78,2197	0/0:22,0:22:66.23:0,66,1899	0/0:23,0:23:69.21:0,69,1845	0/0:28,0:28:81.26:0,81,2208	0/0:18,0:18:51.18:0,51,1469	0/0:21,0:21:63.18:0,63,1569	0/0:14,0:14:42.14:0,42,1217	0/0:30,0:30:90.30:0,90,2456	1/1:2,22:24:51.97:760,52,0	1/1:2,12:14:27.08:366,27,0	1/1:3,10:12:11.53:196,12,0	0/0:24,0:24:72.23:0,72,2021	0/0:30,0:30:90.31:0,90,2576	0/0:23,0:23:69.22:0,69,1854	0/0:18,0:18:54.16:0,54,1429
chr10	72624638	.	ACTT	A	687.81	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.855;DP=582;FS=13.398;HRun=0;HaplotypeScore=81.9882;InbreedingCoeff=0.9971;MQ=84.45;MQ0=0;MQRankSum=-1.418;QD=38.21;ReadPosRankSum=1.453;VQSLOD=4.1430;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:51:783,51,0	0/0:9,0:9:27.09:0,27,612	0/0:22,0:22:62.95:0,63,1323	0/0:15,0:15:39.13:0,39,818	0/0:26,0:26:78.27:0,78,1762	0/0:37,0:37:96.32:0,96,2109	0/0:15,0:15:42.14:0,42,930	0/0:34,0:34:99:0,102,2207	0/0:11,0:11:33.11:0,33,748	0/0:26,0:26:75.26:0,75,1673	0/0:28,0:28:81.25:0,81,1741	0/0:22,0:22:66.23:0,66,1465	0/0:26,0:26:75.22:0,75,1630	0/0:16,0:16:48.16:0,48,1084	0/0:21,0:21:60.18:0,60,1242	0/0:20,0:20:57.20:0,57,1289	0/0:23,0:23:69.17:0,69,1412	0/0:9,0:9:27.09:0,27,593	0/0:13,0:13:33.07:0,33,610	0/0:20,0:20:60.19:0,60,1311	0/0:17,0:17:48.15:0,48,1039	0/0:12,0:12:33.11:0,33,710	0/0:18,0:18:54.17:0,54,1178	0/0:22,0:22:66.20:0,66,1388	0/0:22,0:22:60.20:0,60,1316	0/0:32,0:32:90.29:0,90,1911	0/0:25,0:25:72.25:0,72,1595	0/0:23,0:23:66.20:0,66,1408
chr10	72625274	.	CCTTTCTTT	C	607.04	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=2.504;DP=346;FS=1.328;HRun=0;HaplotypeScore=102.1716;InbreedingCoeff=0.7852;MQ=55.23;MQ0=0;MQRankSum=-1.464;QD=43.36;ReadPosRankSum=-0.152;VQSLOD=3.4748;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:24.02:0,24,389	0/0:4,0:4:9.03:0,9,297	./.	./.	1/1:2,12:14:30.05:701,30,0	0/0:17,0:17:39.11:0,39,1406	0/0:11,0:11:27.07:0,27,789	0/0:24,0:24:45.11:0,45,1227	0/0:15,0:15:33.11:0,33,1289	0/0:12,0:12:20.56:0,21,511	0/0:19,0:19:37.18:0,37,821	0/0:11,0:11:30.10:0,30,1184	0/0:18,0:18:48.16:0,48,1754	0/0:8,0:8:21.07:0,21,763	0/0:7,0:7:15.05:0,15,608	0/0:11,0:11:27.09:0,27,1008	0/0:24,0:24:31.75:0,32,365	0/0:15,0:15:27.98:0,28,658	0/0:11,0:11:24.08:0,24,799	0/0:10,0:10:21.07:0,21,749	0/0:13,0:13:24.08:0,24,1004	0/0:5,0:5:14.94:0,15,372	0/0:11,0:11:27.09:0,27,987	0/0:20,0:20:5.27:0,5,1586	0/0:11,0:11:27.07:0,27,542	0/0:9,0:9:24.08:0,24,867	0/0:14,0:13:33.11:0,33,1299	0/0:6,0:6:12.04:0,12,431
chr10	72627911	.	A	AT	920.37	PASS	AB=0.974;AC=12;AF=0.214;AN=56;BaseQRankSum=-6.479;DP=278;FS=0.999;HRun=10;HaplotypeScore=31.1032;InbreedingCoeff=0.6957;MQ=79.14;MQ0=0;MQRankSum=0.244;QD=12.11;ReadPosRankSum=0.274;VQSLOD=1.9402;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:16:38.88:379,39,0	0/0:3,0:3:5.99:0,6,49	0/0:5,0:5:6.45:0,6,50	0/1:14,0:13:13.95:14,0,99	0/0:10,0:10:26.96:0,27,220	0/0:11,1:12:0.93:0,1,209	0/0:9,0:9:26.97:0,27,222	0/0:24,0:24:53.91:0,54,441	0/0:11,0:11:26.89:0,27,221	1/1:1,4:5:12.02:120,12,0	1/1:2,5:6:12.03:128,12,0	0/0:5,0:5:14.98:0,15,123	0/0:10,0:10:23.46:0,23,196	0/1:17,1:18:0.76:1,0,212	0/0:10,0:10:29.93:0,30,240	0/0:11,0:11:32.95:0,33,268	1/1:0,7:7:21.05:224,21,0	0/0:8,0:8:23.97:0,24,197	0/0:9,0:10:23.01:0,23,178	0/0:10,0:10:20.95:0,21,172	0/0:11,0:11:31.78:0,32,251	0/0:3,0:3:5.98:0,6,49	0/0:6,0:6:14.98:0,15,123	0/0:15,0:16:43.97:0,44,351	1/1:2,7:9:21.05:224,21,0	0/0:13,1:14:6.97:0,7,263	0/0:10,0:10:29.97:0,30,246	0/0:4,0:4:11.95:0,12,93
chr10	72629571	.	CTTT	C	971.67	PASS	AB=0.957;AC=11;AF=0.196;AN=56;BaseQRankSum=6.315;DP=483;FS=8.747;HRun=17;HaplotypeScore=80.3325;InbreedingCoeff=0.8190;MQ=79.81;MQ0=1;MQRankSum=-5.056;QD=8.60;ReadPosRankSum=5.020;VQSLOD=-0.7316;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,13:24:30.75:322,31,0	0/0:5,0:6:18.06:0,18,303	0/0:29,0:21:17.22:0,17,245	0/1:21,0:14:2.44:2,0,44	0/0:16,0:21:45.47:0,45,558	0/0:18,0:22:39.09:0,39,582	0/0:17,0:18:31.33:0,31,470	0/0:21,0:22:39.06:0,39,575	0/0:9,0:13:28.31:0,28,394	1/1:13,9:22:4.88:223,5,0	1/1:5,5:11:17.79:177,18,0	0/0:10,0:12:25.30:0,25,351	0/0:20,0:20:42.07:0,42,648	0/0:19,0:24:51.10:0,51,723	0/0:15,0:19:42.06:0,42,571	0/0:11,0:13:33.09:0,33,497	1/1:8,8:16:20.64:215,21,0	0/0:10,0:13:25.88:0,26,252	0/0:17,0:20:42.97:0,43,593	0/0:23,0:23:43.63:0,44,617	0/0:11,0:11:24.06:0,24,322	0/0:6,0:7:18.02:0,18,240	0/0:13,0:13:27.05:0,27,390	0/0:12,0:13:27.07:0,27,389	1/1:12,6:18:0.34:188,0,0	0/0:16,0:20:51.09:0,51,700	0/0:17,0:20:48.12:0,48,703	0/0:5,0:5:15.05:0,15,220
chr10	72629612	.	GA	G	3680.86	PASS	AB=0.565;AC=21;AF=0.375;AN=56;BaseQRankSum=8.283;DP=430;FS=3.625;HRun=9;HaplotypeScore=56.3139;InbreedingCoeff=0.9130;MQ=72.78;MQ0=0;MQRankSum=-1.048;QD=21.03;ReadPosRankSum=1.974;VQSLOD=4.4594;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:35:87.04:796,87,0	0/0:11,0:11:30.09:0,30,346	0/0:9,0:10:15.45:0,15,125	0/0:18,0:15:14.79:0,15,226	0/0:17,0:17:45.13:0,45,519	0/0:18,0:18:45.13:0,45,517	0/0:12,0:12:33.10:0,33,379	0/0:15,0:15:42.11:0,42,468	0/0:16,0:16:33.09:0,33,371	1/1:6,13:19:36.01:329,36,0	1/1:3,10:13:27.01:247,27,0	0/1:3,10:13:10.75:168,0,11	1/1:1,17:18:48.02:439,48,0	0/0:23,0:23:54.12:0,54,594	0/0:15,0:15:27.08:0,27,311	0/0:12,0:12:33.10:0,33,381	1/1:2,20:22:57.03:522,57,0	1/1:2,14:15:39.02:357,39,0	0/0:26,0:26:48.14:0,48,554	0/0:15,0:15:42.11:0,42,473	0/0:9,0:9:24.07:0,24,277	1/1:1,5:6:12:110,12,0	1/1:3,5:8:15:137,15,0	1/1:1,13:14:32.64:302,33,0	1/1:0,11:11:30.01:274,30,0	0/0:17,0:17:48.13:0,48,544	0/0:16,0:16:48.12:0,48,537	0/0:4,0:4:12.02:0,12,127
chr10	72629795	.	T	TG	2715.58	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.688;DP=612;FS=20.332;HRun=0;HaplotypeScore=84.7600;InbreedingCoeff=0.9529;MQ=59.49;MQ0=11;MQRankSum=-4.555;QD=27.16;ReadPosRankSum=0.469;VQSLOD=2.3867;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,115,1171	0/0:12,0:12:36.06:0,36,444	0/0:25,0:10:18.28:0,18,288	0/0:27,0:13:3.84:0,4,206	0/0:22,0:22:60.01:0,60,773	0/0:15,0:15:39.12:0,39,530	0/0:20,0:20:57.18:0,57,781	0/0:39,0:38:63.19:0,63,1256	0/0:11,0:11:30.10:0,30,419	1/1:8,13:21:40.06:630,40,0	1/1:8,10:18:43.30:534,43,0	0/0:17,0:17:48.12:0,48,634	0/0:17,0:16:48.16:0,48,662	0/0:24,0:24:69.16:0,69,903	0/0:15,0:15:45.13:0,45,598	0/0:19,0:19:54.15:0,54,704	1/1:15,17:32:63.10:881,63,0	0/0:15,0:14:17.43:0,17,122	0/0:35,0:33:90.19:0,90,1139	0/0:29,0:29:84.27:0,84,1154	0/0:18,0:18:54.12:0,54,659	0/0:18,0:18:54.17:0,54,739	0/0:21,0:21:63.09:0,63,770	0/0:20,0:20:51.08:0,51,688	1/1:3,26:29:56.84:830,57,0	0/0:20,0:20:60.19:0,60,809	0/0:22,0:21:66.19:0,66,879	0/0:7,0:7:21.06:0,21,278
chr10	72629799	.	TG	T	1839	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.015;DP=603;FS=18.580;HRun=1;HaplotypeScore=86.4617;InbreedingCoeff=0.9944;MQ=58.32;MQ0=13;MQRankSum=-8.209;QD=11.79;ReadPosRankSum=-0.685;VQSLOD=0.6559;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:41:43.48:279,43,0	0/0:14,0:14:38.98:0,39,415	0/0:24,0:9:21.11:0,21,164	0/0:26,0:12:16.69:0,17,195	0/0:23,0:23:52.65:0,53,710	0/0:14,0:14:42.10:0,42,500	0/0:20,0:20:52:0,52,655	0/0:38,0:37:95.33:0,95,1119	0/0:11,0:11:30.05:0,30,336	1/1:21,2:23:54.90:352,55,0	1/1:18,0:18:50.16:350,50,0	0/0:15,0:15:45.09:0,45,517	0/0:18,0:17:48.04:0,48,562	0/0:24,0:24:68.65:0,69,750	0/0:16,0:16:48.11:0,48,563	0/0:18,0:18:51.04:0,51,573	1/1:31,1:31:72.60:442,73,0	1/1:12,3:14:21.29:174,21,0	0/0:33,0:31:80.89:0,81,951	0/0:31,0:30:84.13:0,84,985	0/0:14,0:14:39.08:0,39,476	0/0:18,0:18:46.09:0,46,607	0/0:23,0:23:58.44:0,58,696	0/0:21,0:21:39.87:0,40,610	1/1:27,0:27:64.41:429,64,0	0/0:19,0:19:57.16:0,57,692	0/0:21,0:20:61.97:0,62,725	0/0:6,0:6:18.06:0,18,224
chr10	72629807	.	G	GT	2249.28	PASS	AB=0.924;AC=16;AF=0.286;AN=56;BaseQRankSum=11.707;DP=595;FS=6.476;HRun=11;HaplotypeScore=83.4989;InbreedingCoeff=0.6917;MQ=55.80;MQ0=17;MQRankSum=-6.055;QD=9.49;ReadPosRankSum=-0.705;VQSLOD=2.5970;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:29,11:40:23.23:511,23,0	0/0:12,0:13:37.87:0,38,280	0/0:21,0:7:6.84:0,7,49	0/1:25,0:11:1.82:2,0,27	0/0:20,1:22:16.05:0,16,318	0/1:11,2:14:25.97:26,0,180	0/0:18,0:20:43.79:0,44,315	0/0:37,0:35:67.70:0,68,510	0/0:11,0:11:29.87:0,30,230	1/1:13,9:23:29.57:417,30,0	1/1:11,7:19:38.19:346,38,0	0/0:16,0:16:30.70:0,31,220	0/0:18,0:17:38.07:0,38,286	0/0:20,0:21:52.81:0,53,396	0/1:13,1:14:0.57:1,0,179	0/0:17,0:18:46.85:0,47,352	1/1:22,13:34:60.62:594,61,0	1/1:15,3:16:13.83:98,14,0	0/0:32,0:30:67.25:0,67,495	0/0:29,0:29:37.29:0,37,451	0/0:16,0:16:40.86:0,41,306	0/0:17,0:17:50.81:0,51,394	0/1:21,3:24:32.25:32,0,318	0/0:21,0:21:47.52:0,48,355	1/1:14,11:25:44.77:409,45,0	0/0:18,0:18:15.51:0,16,255	0/0:18,0:18:46.86:0,47,354	0/0:6,0:6:14.94:0,15,116
chr10	72631646	.	TACACACAC	T	717.33	PASS	AB=0.907;AC=14;AF=0.304;AN=46;BaseQRankSum=4.797;DP=460;FS=8.781;HRun=0;HaplotypeScore=109.0939;InbreedingCoeff=0.6356;MQ=60.83;MQ0=16;MQRankSum=-5.636;QD=4.66;ReadPosRankSum=1.205;VQSLOD=1.2405;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,6:34:0:0,0,0	0/0:6,0:7:6.49:0,6,107	./.	./.	0/0:20,0:19:20.88:0,21,586	0/0:14,0:15:27.07:0,27,660	0/0:22,0:22:15.05:0,15,378	0/0:17,0:16:8.99:0,9,97	0/0:6,0:6:12.04:0,12,366	./.	./.	1/1:17,2:17:5.85:148,6,0	1/1:18,2:20:5.64:148,6,0	0/0:18,0:18:15.05:0,15,367	0/0:21,0:21:9.03:0,9,251	0/0:20,0:20:38.78:0,39,1076	0/1:23,0:24:38.86:47,0,39	1/1:10,0:11:5.65:71,6,0	0/0:11,0:11:4.57:0,5,97	0/0:17,0:20:27.01:0,27,359	0/0:30,0:30:18.04:0,18,338	1/1:8,0:9:3:56,3,0	./.	1/1:19,1:19:9.50:173,9,0	1/1:9,0:14:12.04:223,12,0	0/0:15,0:13:21.94:0,22,353	0/0:10,0:10:12.04:0,12,272	0/0:8,0:7:6.02:0,6,143
chr10	72637818	.	AAGC	A	596.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.529;DP=718;FS=10.451;HRun=0;HaplotypeScore=99.0184;InbreedingCoeff=0.9209;MQ=74.49;MQ0=0;MQRankSum=-1.721;QD=14.19;ReadPosRankSum=-0.006;VQSLOD=2.7095;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,24:42:48.14:691,48,0	0/0:6,0:6:15.05:0,15,306	0/0:25,0:24:44.77:0,45,908	0/0:31,1:30:11.44:0,11,879	0/0:13,0:13:21.06:0,21,392	0/0:15,0:15:36.12:0,36,734	0/0:21,0:21:51.15:0,51,943	0/0:36,0:36:61.42:0,61,1124	0/0:27,0:27:69.24:0,69,1400	0/0:26,0:26:33.10:0,33,576	0/0:15,0:15:18.03:0,18,295	0/0:26,0:26:66.21:0,66,1289	0/0:37,0:37:90.29:0,90,1768	0/0:40,0:40:81.26:0,81,1604	0/0:39,0:39:96.30:0,96,1884	0/0:26,0:26:69.21:0,69,1335	0/0:29,0:29:69.24:0,69,1388	0/0:22,0:22:48.14:0,48,921	0/0:24,0:24:27.07:0,27,480	0/0:24,0:24:30.09:0,30,575	0/0:36,0:36:81.13:0,81,1543	0/0:15,0:15:27.09:0,27,550	0/0:18,0:18:15.04:0,15,270	0/0:22,0:22:42.13:0,42,820	0/0:27,0:27:54.15:0,54,1018	0/0:29,0:29:36.11:0,36,693	0/0:37,0:37:96.33:0,96,1923	0/0:9,0:9:21.07:0,21,413
chr10	72639393	.	CT	C	6090.28	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=13.650;DP=556;FS=12.956;HRun=6;HaplotypeScore=57.9677;InbreedingCoeff=0.9810;MQ=77.73;MQ0=0;MQRankSum=-3.294;QD=27.43;ReadPosRankSum=4.001;VQSLOD=4.3650;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:48.12:516,48,0	0/0:14,0:14:42.14:0,42,553	0/0:14,0:13:4.87:0,5,285	0/0:13,0:13:35.13:0,35,390	0/0:27,0:27:78.25:0,78,1021	0/0:22,0:22:63.19:0,63,811	0/0:17,0:17:45.14:0,45,579	0/0:34,0:34:90.23:0,90,1151	0/0:22,0:22:66.20:0,66,853	1/1:1,17:18:51.13:546,51,0	1/1:1,28:29:72.18:773,72,0	1/1:2,18:20:54.14:580,54,0	1/1:2,20:22:51.13:548,51,0	0/0:18,0:18:54.16:0,54,695	0/0:17,0:17:51.17:0,51,670	0/0:12,0:12:31.34:0,31,397	1/1:1,17:18:39.10:419,39,0	1/1:1,18:19:54.14:580,54,0	0/0:19,0:19:57.17:0,57,718	0/0:26,0:26:78.24:0,78,1011	0/0:10,0:10:27.09:0,27,355	1/1:1,17:18:48.12:516,48,0	1/1:3,19:22:51.12:548,51,0	1/1:1,8:9:24.06:258,24,0	1/1:2,27:29:75.18:806,75,0	0/0:25,0:25:72.22:0,72,924	0/0:29,0:28:75.24:0,75,986	0/0:15,0:14:30.10:0,30,395
chr10	72640682	.	A	AT	2728.86	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-9.181;DP=513;FS=1.417;HRun=9;HaplotypeScore=51.1906;InbreedingCoeff=0.9896;MQ=75.42;MQ0=0;MQRankSum=-0.908;QD=24.81;ReadPosRankSum=2.377;VQSLOD=4.4278;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:69.19:764,69,0	0/0:5,0:5:15:0,15,130	0/0:22,0:18:27.71:0,28,218	0/0:17,1:16:14.27:0,14,122	0/0:28,0:28:74.50:0,75,650	0/0:19,0:19:50.99:0,51,443	0/0:21,0:21:49.77:0,50,417	0/0:36,0:36:77.94:0,78,673	0/0:9,0:9:26.98:0,27,232	1/1:0,11:11:33.09:365,33,0	1/1:3,12:14:39.10:428,39,0	0/0:23,0:23:68.97:0,69,595	0/0:25,0:25:62.96:0,63,543	0/0:17,0:17:47.98:0,48,417	0/0:14,0:14:35.99:0,36,312	0/0:18,0:18:47.97:0,48,413	1/1:3,22:24:66.18:730,66,0	1/1:4,13:17:30.08:332,30,0	0/0:22,1:23:17.80:0,18,383	0/0:11,0:11:32.99:0,33,286	0/0:9,0:9:23.99:0,24,208	0/0:14,0:14:38.98:0,39,338	0/0:10,0:10:29.98:0,30,258	0/0:17,0:17:44.98:0,45,391	1/1:0,13:13:27.07:299,27,0	0/0:21,1:22:26.81:0,27,461	0/0:28,0:28:74.96:0,75,651	0/0:13,0:13:38.99:0,39,338
chr10	72641016	.	T	TTGTGTGTG	2442.22	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-0.597;DP=491;FS=0.000;HRun=0;HaplotypeScore=129.4973;InbreedingCoeff=0.8744;MQ=61.78;MQ0=4;MQRankSum=-8.087;QD=23.48;ReadPosRankSum=-1.454;VQSLOD=2.9815;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,4:24:12.04:436,12,0	0/0:5,0:5:9.03:0,9,230	0/0:31,0:12:18.04:0,18,345	0/0:27,0:15:8.24:0,8,161	0/0:18,0:19:42.13:0,42,996	0/0:9,0:9:18.53:0,19,433	0/0:11,0:11:24.08:0,24,522	0/0:28,0:29:33.10:0,33,718	0/0:10,0:13:14.66:0,15,362	1/1:10,4:15:15.05:563,15,0	1/1:12,4:18:12.02:338,12,0	0/0:17,0:17:32.68:0,33,725	0/0:21,0:22:33.11:0,33,806	0/0:15,0:16:42.14:0,42,1015	0/0:20,0:22:42.14:0,42,1053	0/0:13,0:14:36.12:0,36,871	1/1:11,1:14:3.48:125,3,0	1/1:9,0:14:9.45:415,9,0	0/0:22,0:23:18.01:0,18,433	0/0:20,0:18:27.08:0,27,634	0/0:43,0:43:69.22:0,69,1677	0/0:6,0:6:12.03:0,12,256	0/0:8,0:9:15.03:0,15,310	0/0:13,0:13:26.98:0,27,690	1/1:12,5:19:21.07:737,21,0	0/0:14,0:14:30.10:0,30,765	0/0:14,0:16:30.09:0,30,645	0/0:8,0:8:6.02:0,6,153
chr10	72642331	.	TA	T	1902.15	PASS	AB=0.788;AC=26;AF=0.464;AN=56;BaseQRankSum=5.269;DP=544;FS=11.217;HRun=15;HaplotypeScore=71.6745;InbreedingCoeff=0.2654;MQ=77.84;MQ0=2;MQRankSum=-0.239;QD=5.68;ReadPosRankSum=4.716;VQSLOD=1.5294;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,16:22:8.76:205,0,9	0/1:5,1:6:7.29:7,0,60	0/0:29,2:21:1.11:0,1,113	0/0:27,0:18:6.82:0,7,115	0/0:23,3:30:17.17:0,17,482	0/0:20,1:23:25.57:0,26,338	0/0:9,1:11:1.57:0,2,127	0/1:30,5:36:0.94:1,0,350	0/1:17,3:20:2.54:3,0,228	1/1:10,8:18:23.55:153,24,0	1/1:6,11:17:22.82:153,23,0	1/1:2,21:23:50.19:327,50,0	0/1:7,10:18:3.48:98,0,3	0/0:13,2:16:10.57:0,11,206	0/0:14,1:15:7.73:0,8,192	0/1:17,3:21:12.98:13,0,257	1/1:6,6:13:4.30:137,4,0	1/1:8,17:25:46.61:296,47,0	0/0:14,0:15:38.57:0,39,297	0/0:26,3:30:10.32:0,10,350	0/0:10,0:10:26.99:0,27,237	1/1:4,10:14:3.01:146,3,0	0/1:5,6:11:8.73:78,0,9	1/1:1,10:11:26.60:173,27,0	1/1:9,19:30:39.40:242,39,0	0/1:14,4:19:24.90:25,0,166	0/1:18,4:23:17.51:18,0,312	0/1:6,1:7:7.28:7,0,63
chr10	72642877	.	CCCCCA	C	2651.51	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=1.315;DP=470;FS=20.672;HRun=0;HaplotypeScore=105.1086;InbreedingCoeff=0.8518;MQ=67.68;MQ0=5;MQRankSum=-3.255;QD=19.35;ReadPosRankSum=4.529;VQSLOD=1.2774;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:18:5.71:57,6,0	0/0:7,0:6:16.59:0,17,207	0/1:28,0:18:5.71:6,0,378	0/0:27,0:22:45.97:0,46,688	0/0:11,0:11:17.98:0,18,150	0/0:11,0:11:18.42:0,18,236	0/0:17,0:17:34.32:0,34,336	0/0:9,0:9:14.97:0,15,124	0/0:14,0:14:26.19:0,26,271	1/1:5,19:22:44.90:535,45,0	1/1:8,13:21:29.02:499,29,0	0/0:25,0:25:50.79:0,51,947	0/0:25,1:26:22.22:0,22,1044	0/0:8,0:8:12.85:0,13,101	0/0:14,0:14:32.96:0,33,391	0/0:21,0:21:50.97:0,51,558	1/1:4,23:27:56.23:1090,56,0	0/0:8,0:8:20.94:0,21,195	0/0:11,0:11:23.93:0,24,241	0/0:14,0:14:26.97:0,27,273	0/0:16,0:16:32.55:0,33,377	0/0:23,0:23:36.31:0,36,704	0/0:24,0:24:19.02:0,19,791	0/0:14,0:14:39.08:0,39,517	1/1:9,10:19:40.29:636,40,0	0/0:14,0:14:19.85:0,20,198	0/0:13,0:13:27.46:0,27,355	0/0:6,0:6:8.75:0,9,86
chr10	72642878	.	CCCCACA	C	760.62	PASS	AB=0.978;AC=10;AF=0.179;AN=56;BaseQRankSum=7.413;DP=460;FS=0.000;HRun=0;HaplotypeScore=118.5470;InbreedingCoeff=0.7028;MQ=67.95;MQ0=5;MQRankSum=-4.018;QD=7.38;ReadPosRankSum=5.965;VQSLOD=1.8221;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,10:17:5.56:110,6,0	0/0:7,0:6:12.89:0,13,107	0/0:29,0:19:8.11:0,8,515	0/0:26,0:21:9.91:0,10,722	0/0:11,0:11:12.01:0,12,148	0/0:11,0:11:11.06:0,11,214	0/0:17,0:17:27.98:0,28,424	0/0:11,0:11:21.02:0,21,269	0/0:11,0:11:26.38:0,26,312	0/1:19,0:20:2.20:83,0,2	1/1:16,0:17:21.32:191,21,0	0/0:26,0:26:50.35:0,50,1522	0/0:27,0:27:12.75:0,13,1616	0/0:9,0:9:18.46:0,18,193	0/0:15,0:15:31.30:0,31,301	0/0:21,0:21:48.03:0,48,553	1/1:25,0:26:46.92:306,47,0	0/0:7,0:7:11.97:0,12,152	0/0:12,0:12:28.13:0,28,378	0/0:14,0:14:4.01:0,4,222	0/0:16,0:16:29.59:0,30,446	0/0:21,0:21:38.47:0,38,1153	0/0:25,0:25:19.78:0,20,1352	0/0:14,0:14:42.14:0,42,911	1/1:16,0:17:31.11:220,31,0	0/0:14,0:14:26.74:0,27,266	0/0:13,0:13:27.43:0,27,319	0/1:4,0:4:10.40:10,0,65
chr10	72642881	.	CA	C	723.94	PASS	AB=0.963;AC=16;AF=0.286;AN=56;BaseQRankSum=6.723;DP=423;FS=7.109;HRun=1;HaplotypeScore=79.3079;InbreedingCoeff=0.5912;MQ=69.82;MQ0=5;MQRankSum=-3.276;QD=4.89;ReadPosRankSum=3.624;VQSLOD=0.6443;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:4.74:17,5,0	1/1:5,2:6:3.46:25,3,0	0/0:30,1:20:24.35:0,24,270	0/0:25,0:20:13.60:0,14,336	0/0:8,0:8:5.98:0,6,49	0/1:12,0:12:10.71:11,0,93	0/0:15,0:15:19.16:0,19,148	0/1:11,0:11:8.18:8,0,95	0/0:8,0:8:7.98:0,8,54	1/1:22,0:20:35.11:262,35,0	1/1:16,0:16:17.24:119,17,0	0/0:25,0:25:71.61:0,72,726	0/0:31,0:31:71.25:0,71,810	0/0:8,0:8:11.90:0,12,92	0/1:11,1:12:2.03:2,0,38	0/0:13,0:13:17.75:0,18,136	1/1:25,0:25:54.63:285,55,0	0/0:5,0:5:10.12:0,10,67	0/1:12,1:13:1.94:2,0,154	0/0:10,0:11:20.89:0,21,159	0/0:10,0:10:20.55:0,21,166	0/0:20,0:20:58.07:0,58,566	0/0:24,0:24:71.36:0,71,684	0/0:15,0:15:42.03:0,42,417	1/1:16,0:16:28.15:168,28,0	0/0:13,0:13:10.26:0,10,77	0/0:7,0:7:6.36:0,6,60	0/0:6,0:6:8.94:0,9,72
chr10	72644037	.	CA	C	3595.17	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.599;DP=540;FS=14.655;HRun=4;HaplotypeScore=49.1411;InbreedingCoeff=0.9778;MQ=70.78;MQ0=0;MQRankSum=-0.987;QD=32.98;ReadPosRankSum=0.214;VQSLOD=2.4946;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.25:0,81,1115	0/0:7,0:7:21.07:0,21,294	0/0:9,0:9:21.07:0,21,285	0/0:5,0:5:9.03:0,9,126	0/0:31,0:31:93.31:0,93,1292	0/0:21,0:21:57.19:0,57,798	0/0:9,0:9:27.09:0,27,377	0/0:27,0:27:81.25:0,81,1103	0/0:15,0:15:45.15:0,45,630	1/1:1,33:34:99:1151,99,0	1/1:3,26:29:75.23:896,75,0	0/0:11,0:11:33.11:0,33,462	0/0:30,0:30:87.28:0,87,1201	0/0:20,0:20:54.18:0,54,755	0/0:16,0:15:48.16:0,48,672	0/0:20,0:20:54.18:0,54,756	1/1:0,16:16:45.14:540,45,0	0/0:23,0:23:63.21:0,63,881	0/0:9,0:9:21.07:0,21,294	0/0:16,0:16:48.16:0,48,662	0/0:6,0:6:18.04:0,18,234	0/0:19,0:19:57.19:0,57,797	0/0:25,0:25:75.25:0,75,1050	0/0:9,0:9:27.09:0,27,378	1/1:0,30:30:84.26:1008,84,0	0/0:27,0:27:78.26:0,78,1087	0/0:34,0:33:99:0,102,1425	0/0:15,0:15:45.14:0,45,613
chr10	72646599	.	GA	G	692.53	PASS	AB=0.969;AC=6;AF=0.107;AN=56;BaseQRankSum=7.716;DP=607;FS=1.340;HRun=9;HaplotypeScore=61.4066;InbreedingCoeff=0.6626;MQ=77.82;MQ0=0;MQRankSum=0.314;QD=9.23;ReadPosRankSum=0.452;VQSLOD=1.9227;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,16:21:44.05:390,44,0	0/0:14,0:14:39.12:0,39,450	0/1:14,0:15:4:4,0,296	0/1:17,0:17:17.88:18,0,234	0/0:34,0:34:99:0,99,1132	0/0:21,0:21:60.18:0,60,692	0/0:10,0:10:27.08:0,27,312	0/0:37,0:38:99:0,99,1122	0/0:13,0:13:36.11:0,36,415	0/0:29,0:29:78.23:0,78,900	0/0:20,1:21:29.70:0,30,596	0/0:18,0:18:54.14:0,54,604	0/0:24,0:24:69.19:0,69,785	0/0:9,0:9:24.07:0,24,277	0/0:24,0:24:63.19:0,63,727	0/0:25,0:25:63.16:0,63,707	0/0:24,0:24:69.19:0,69,786	1/1:2,20:22:45.02:412,45,0	0/0:29,0:29:72.19:0,72,807	0/0:21,0:21:51.14:0,51,580	0/0:13,0:13:39.12:0,39,449	0/0:25,1:26:47.74:0,48,792	0/0:24,0:24:69.20:0,69,788	0/0:6,0:6:15.04:0,15,173	0/0:29,1:30:50.76:0,51,838	0/0:27,0:27:78.18:0,78,878	0/0:32,1:31:62.80:0,63,976	0/0:19,0:19:54.16:0,54,623
chr10	72646864	.	CA	C	645.24	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.114;DP=608;FS=5.798;HRun=2;HaplotypeScore=59.4591;InbreedingCoeff=0.9825;MQ=83.78;MQ0=0;MQRankSum=-3.356;QD=26.89;ReadPosRankSum=0.206;VQSLOD=3.0010;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1737	0/0:8,0:8:24.08:0,24,354	0/0:21,0:21:56.08:0,56,867	0/0:22,0:22:58.72:0,59,787	0/0:26,0:26:78.26:0,78,1158	0/0:15,0:15:42.14:0,42,629	0/0:19,0:19:57.15:0,57,793	0/0:18,0:18:54.18:0,54,808	0/0:15,0:15:45.15:0,45,668	0/0:24,0:24:66.22:0,66,989	0/0:16,0:16:48.16:0,48,719	0/0:27,0:27:78.26:0,78,1167	0/0:25,0:25:75.25:0,75,1101	0/0:25,0:25:75.25:0,75,1122	0/0:24,0:24:72.24:0,72,1079	0/0:17,0:17:51.17:0,51,764	0/0:24,0:24:72.22:0,72,1047	1/1:1,23:24:57.19:740,57,0	0/0:15,0:15:45.14:0,45,656	0/0:26,0:26:75.25:0,75,1121	0/0:42,0:42:99:0,123,1813	0/0:15,0:15:45.15:0,45,673	0/0:19,0:19:57.18:0,57,829	0/0:23,0:23:69.21:0,69,989	0/0:20,0:20:60.19:0,60,877	0/0:24,0:24:69.23:0,69,1015	0/0:29,0:29:84.27:0,84,1233	0/0:5,0:5:15.05:0,15,225
chr10	72652349	.	C	CCTGCCCCTCTCTCTAGAG	24352.68	PASS	AB=0.646;AC=11;AF=0.196;AN=56;BaseQRankSum=2.728;DP=696;FS=2.638;HRun=0;HaplotypeScore=308.0875;InbreedingCoeff=0.8725;MQ=74.91;MQ0=0;MQRankSum=-15.787;QD=144.10;ReadPosRankSum=-1.637;VQSLOD=3.8993;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,10:46:93.32:6580,93,0	0/0:10,0:10:30.10:0,30,1264	0/0:19,0:19:57.02:0,57,2000	0/0:12,0:12:32.11:0,32,748	0/0:30,0:30:84.29:0,84,3791	0/0:19,0:19:57.15:0,57,2356	0/0:31,0:31:90.29:0,90,4356	0/0:25,0:25:72.25:0,72,3295	0/0:23,0:23:63.22:0,63,2951	1/1:22,5:32:96.27:5804,96,0	1/1:10,1:13:8.95:483,9,0	0/0:30,0:30:87.28:0,87,4260	0/0:35,0:35:99:0,105,4980	0/0:30,0:30:90.31:0,90,4492	0/0:28,0:28:84.29:0,84,3954	0/0:22,0:22:66.23:0,66,3347	0/1:14,11:31:91.54:4911,0,92	1/1:9,5:16:39.13:2703,39,0	0/0:22,0:22:66.21:0,66,2789	0/0:24,0:24:72.25:0,72,3577	0/0:25,0:25:75.26:0,75,3627	0/0:20,0:20:60.21:0,60,2781	0/0:26,0:26:68.74:0,69,3381	0/0:39,0:39:99:0,114,5563	1/1:19,5:31:63.22:3872,63,0	0/0:28,0:28:81.28:0,81,4248	0/0:19,0:19:57.18:0,57,2636	0/0:10,0:10:24.08:0,24,1161
chr10	72653190	.	GAA	G	2457.71	PASS	AB=0.760;AC=16;AF=0.286;AN=56;BaseQRankSum=4.130;DP=517;FS=2.922;HRun=12;HaplotypeScore=70.5793;InbreedingCoeff=0.7400;MQ=74.95;MQ0=2;MQRankSum=2.368;QD=12.67;ReadPosRankSum=3.992;VQSLOD=2.2273;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,19:27:17.54:425,18,0	0/0:9,0:9:26.58:0,27,362	0/0:13,0:13:17.73:0,18,200	0/1:13,1:12:8.93:9,0,175	0/0:21,0:21:59.67:0,60,819	0/0:25,0:27:59.14:0,59,781	0/0:8,0:10:27.08:0,27,370	0/0:26,0:28:66.18:0,66,912	0/1:10,1:11:0.42:0,0,371	1/1:6,16:22:25.33:462,25,0	1/1:1,19:21:47.76:458,48,0	0/0:1,0:9:20.46:0,20,85	0/1:7,1:21:0.72:1,0,66	0/0:11,0:11:26.58:0,27,364	0/0:20,0:21:57.19:0,57,832	0/0:12,0:15:36.11:0,36,502	1/1:4,26:32:50.56:623,51,0	1/1:3,17:19:42.08:427,42,0	0/0:10,0:11:26.58:0,27,367	0/0:23,0:25:67.49:0,67,882	0/0:15,0:17:42.13:0,42,592	0/1:4,1:13:4.54:5,0,89	0/0:10,0:27:32.80:0,33,125	0/0:4,0:15:25.34:0,25,116	1/1:4,8:13:17.74:233,18,0	0/0:25,0:28:68.20:0,68,934	0/0:31,0:31:84.28:0,84,1244	0/0:4,0:4:12.04:0,12,179
chr10	72655267	.	AGG	A	7316.93	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.525;DP=773;FS=8.833;HRun=4;HaplotypeScore=107.1323;InbreedingCoeff=0.9936;MQ=87.47;MQ0=0;MQRankSum=-3.837;QD=37.14;ReadPosRankSum=4.048;VQSLOD=3.6455;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,34:39:99:1457,99,0	0/0:9,0:9:27.09:0,27,506	0/0:26,0:26:78.25:0,78,1380	0/0:28,0:28:81.28:0,81,1407	0/0:33,0:33:96.29:0,96,1678	0/0:27,0:27:78.25:0,78,1413	0/0:16,0:16:48.16:0,48,894	0/0:38,0:38:99:0,111,1991	0/0:22,0:22:66.23:0,66,1231	0/0:37,0:37:99:0,108,1970	0/0:23,0:23:69.24:0,69,1237	1/1:3,29:32:75.25:1101,75,0	1/1:1,31:32:78.26:1148,78,0	0/0:31,0:31:87.30:0,87,1625	0/0:29,0:29:87.30:0,87,1614	0/0:30,0:30:81.28:0,81,1496	0/0:21,0:21:60.21:0,60,1124	0/0:15,0:15:45.15:0,45,827	0/0:18,0:18:51.17:0,51,943	0/0:33,0:33:96.33:0,96,1785	0/0:35,0:35:99:0,105,1888	1/1:5,27:32:78.26:1146,78,0	1/1:5,21:26:63.21:919,63,0	1/1:0,36:36:99:1546,105,0	0/0:31,0:31:90.30:0,90,1648	0/0:29,0:29:84.27:0,84,1479	0/0:40,0:40:99:0,117,2176	0/0:5,0:5:12.04:0,12,225
chr10	72655270	.	GGT	G	3438.01	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=17.793;DP=770;FS=7.362;HRun=0;HaplotypeScore=119.3433;InbreedingCoeff=0.9935;MQ=88.94;MQ0=0;MQRankSum=-6.783;QD=18.00;ReadPosRankSum=4.505;VQSLOD=3.5923;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,1:36:78.05:678,78,0	0/0:9,0:9:27.09:0,27,548	0/0:27,0:27:81.23:0,81,1467	0/0:30,0:30:87.25:0,87,1488	0/0:33,0:33:96.21:0,96,1604	0/0:25,0:25:75.26:0,75,1501	0/0:17,0:17:51.17:0,51,1019	0/0:37,0:37:99:0,111,2132	0/0:24,0:24:72.19:0,72,1374	0/0:39,0:39:99:0,111,2166	0/0:23,0:23:69.21:0,69,1283	1/1:31,1:32:30.36:507,30,0	1/1:32,0:32:56.16:515,56,0	0/0:30,0:30:90.29:0,90,1737	0/0:29,0:29:87.30:0,87,1729	0/0:28,0:28:84.23:0,84,1629	0/0:22,0:22:66.21:0,66,1287	0/0:15,0:15:45.11:0,45,871	0/0:18,0:18:54.16:0,54,999	0/0:34,0:34:99:0,102,1911	0/0:35,0:35:99:0,102,1968	1/1:27,2:29:77.03:554,77,0	1/1:21,3:24:62.44:506,62,0	1/1:38,0:38:63.94:678,64,0	0/0:29,0:29:87.30:0,87,1735	0/0:31,0:31:87.25:0,87,1622	0/0:40,0:40:99:0,120,2374	0/0:4,0:4:12.04:0,12,243
chr10	72657762	.	ATGTGTGTGTGTGTGTG	A	2723.45	PASS	AB=0.770;AC=13;AF=0.232;AN=56;BaseQRankSum=5.183;DP=604;FS=0.000;HRun=0;HaplotypeScore=257.4443;InbreedingCoeff=0.4813;MQ=63.21;MQ0=17;MQRankSum=0.163;QD=14.33;ReadPosRankSum=4.175;VQSLOD=1.9887;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:21.15:0,21,351	0/0:10,0:10:21.07:0,21,1311	0/0:21,0:16:3.01:0,3,30	0/0:19,0:17:8.98:0,9,123	0/0:26,0:24:39.08:0,39,1011	0/0:16,0:17:24.05:0,24,564	0/0:27,0:27:34.21:0,34,879	0/0:22,0:22:30.08:0,30,541	0/0:28,0:28:52.71:0,53,2277	1/1:26,0:26:15.95:595,16,0	1/1:19,0:19:6.02:159,6,0	0/1:14,0:20:99:333,0,364	0/1:16,0:23:99:542,0,351	0/0:23,0:23:39.12:0,39,1835	0/0:14,0:13:24.08:0,24,817	0/0:25,0:24:54.17:0,54,2422	1/1:17,0:14:15.31:187,15,0	0/0:16,0:14:15.03:0,15,468	0/0:23,0:23:26:0,26,651	0/0:8,0:8:9.03:0,9,312	0/0:26,0:24:42.11:0,42,1508	0/1:9,4:13:0:0,0,0	0/1:9,11:22:94.72:95,0,98	0/1:25,0:26:87.09:536,0,87	1/1:22,0:22:12.04:441,12,0	0/0:26,0:26:47.64:0,48,1480	0/0:28,0:28:45.13:0,45,1934	0/0:17,0:17:39.09:0,39,1742
chr10	72657784	.	GTGTGTGTGTGTGTGTGTGTGTCTGTCTGTCTGTCTGTC	G	3689.35	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=7.013;DP=647;FS=3.155;HRun=0;HaplotypeScore=479.9831;InbreedingCoeff=0.6904;MQ=49.77;MQ0=31;MQRankSum=-2.549;QD=24.93;ReadPosRankSum=0.857;VQSLOD=0.4488;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:28:57.15:0,57,3835	0/0:10,0:9:27.08:0,27,3300	0/0:7,0:4:9.01:0,9,127	0/0:6,0:4:12:0,12,163	0/0:30,0:28:57.06:0,57,4162	0/0:28,0:26:57.17:0,57,4121	0/0:32,0:31:44.22:0,44,2718	0/0:21,0:20:57.18:0,57,1528	0/0:28,0:27:65.24:0,65,5972	1/1:5,22:26:43.07:1573,43,0	1/1:2,20:22:6.02:396,6,0	0/1:23,0:23:27.53:28,0,3911	0/0:23,0:22:51.09:0,51,3354	0/0:25,0:23:54.63:0,55,5107	0/0:17,0:15:42.14:0,42,4225	0/0:30,0:29:57.17:0,57,5306	1/1:20,0:16:20.44:401,20,0	0/0:15,0:12:15.02:0,15,1248	0/0:18,0:17:45.43:0,45,2874	0/0:16,0:14:27.56:0,28,2528	0/0:34,0:31:75.20:0,75,6077	0/0:20,0:19:17.98:0,18,1962	0/0:28,0:27:12.13:0,12,2825	0/1:32,0:32:99:122,0,3880	1/1:2,22:24:12.04:1169,12,0	0/0:25,0:24:72.21:0,72,5910	0/0:31,0:29:72.21:0,72,7262	0/0:20,0:19:55.74:0,56,6299
chr10	72657802	.	G	GTGTC	1291.23	PASS	AB=0.901;AC=13;AF=0.241;AN=54;BaseQRankSum=5.005;DP=642;FS=2.835;HRun=0;HaplotypeScore=175.1171;InbreedingCoeff=0.5857;MQ=48.94;MQ0=34;MQRankSum=3.657;QD=6.59;ReadPosRankSum=-0.766;VQSLOD=2.9432;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:27:41.90:0,42,335	1/1:9,1:9:14.77:232,15,0	./.	0/0:3,0:1:2.99:0,3,23	0/0:27,0:24:32.76:0,33,266	0/0:30,0:28:48.46:0,48,373	0/0:35,0:34:25.62:0,26,220	0/0:31,0:29:26.32:0,26,189	0/0:24,0:24:20.76:0,21,234	0/0:24,0:23:11.92:0,12,106	0/0:20,0:20:1.55:0,2,4	0/1:23,0:23:4.54:166,0,5	1/1:23,0:22:0.32:58,0,0	0/0:22,0:20:23.84:0,24,230	0/1:19,0:17:37.83:144,0,38	0/1:19,13:32:18.92:65,0,19	0/0:21,0:17:16.56:0,17,114	0/0:17,0:14:0.47:0,0,1	0/0:15,0:15:17.93:0,18,145	0/0:18,0:16:26.35:0,26,203	0/0:28,0:26:38.76:0,39,293	1/1:22,0:21:20.97:173,21,0	1/1:36,0:35:44.35:361,44,0	1/1:30,0:30:23.78:259,24,0	0/0:22,0:22:9.48:0,9,82	0/0:23,0:20:38.92:0,39,338	0/0:27,0:25:38.94:0,39,370	0/0:21,0:20:29.91:0,30,292
chr10	72659969	.	G	GGTTTT	1367.55	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.015;DP=602;FS=4.300;HRun=0;HaplotypeScore=115.0997;InbreedingCoeff=0.8064;MQ=65.49;MQ0=0;MQRankSum=-6.296;QD=36.96;ReadPosRankSum=-1.421;VQSLOD=3.0240;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,15:37:57.19:1462,57,0	0/0:12,0:12:27.09:0,27,510	0/0:19,0:15:3.39:0,3,292	0/0:17,0:13:8.55:0,9,107	0/0:28,0:28:66.21:0,66,1202	0/0:19,0:19:33.10:0,33,591	0/0:28,0:28:69.22:0,69,1271	0/0:31,0:31:54.15:0,54,954	0/0:17,0:17:39.13:0,39,729	0/0:26,0:26:57.17:0,57,975	0/0:22,0:22:48.16:0,48,897	0/0:21,0:21:51.16:0,51,927	0/0:22,0:22:39.12:0,39,695	0/0:17,0:17:45.14:0,45,817	0/0:20,0:20:48.15:0,48,854	0/0:16,0:16:36.12:0,36,668	0/0:31,0:31:72.23:0,72,1311	0/0:28,0:28:66.20:0,66,1203	0/0:16,0:16:27.09:0,27,503	0/0:25,0:25:54.19:0,54,1006	0/0:9,0:9:19.10:0,19,394	0/0:17,0:17:36.12:0,36,681	0/0:15,0:15:39.13:0,39,715	0/0:24,0:24:54.19:0,54,1019	0/0:19,0:19:45.15:0,45,838	0/0:32,0:32:72.25:0,72,1355	0/0:16,0:16:45.15:0,45,841	0/0:18,0:18:39.12:0,39,684
chr10	72659996	.	GT	G	444.79	PASS	AB=0.955;AC=3;AF=0.054;AN=56;BaseQRankSum=7.247;DP=585;FS=2.549;HRun=9;HaplotypeScore=67.0550;InbreedingCoeff=0.6607;MQ=70.20;MQ0=0;MQRankSum=-4.585;QD=9.08;ReadPosRankSum=0.529;VQSLOD=2.1286;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:28:51.20:537,51,0	0/0:12,0:12:30.06:0,30,332	0/1:20,1:18:9.87:10,0,266	0/0:19,0:16:32.57:0,33,338	0/0:23,0:24:44.95:0,45,489	0/0:13,0:13:33.10:0,33,381	0/0:30,0:30:75.22:0,75,865	0/0:32,0:32:75.21:0,75,856	0/0:15,0:15:42.12:0,42,484	0/0:21,0:21:54.16:0,54,623	0/0:18,0:18:42.12:0,42,485	0/0:16,1:17:17.67:0,18,457	0/0:23,0:23:66.20:0,66,761	0/0:18,0:18:45.12:0,45,509	0/0:20,0:20:54.16:0,54,623	0/0:16,0:16:48.14:0,48,554	0/0:24,2:26:17.28:0,17,705	0/0:29,0:29:78.23:0,78,899	0/0:20,0:20:48.14:0,48,553	0/0:22,0:22:54.16:0,54,623	0/0:13,0:13:27.08:0,27,312	0/0:27,0:27:78.21:0,78,880	0/0:14,0:14:33.10:0,33,381	0/0:21,0:21:48.14:0,48,554	0/0:22,1:24:41.57:0,42,714	0/0:27,1:28:53.77:0,54,871	0/0:24,0:24:63.19:0,63,726	0/0:10,0:10:30.09:0,30,346
chr10	72660662	.	AT	A	2246.36	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.712;DP=621;FS=1.362;HRun=9;HaplotypeScore=74.0997;InbreedingCoeff=0.9431;MQ=70.64;MQ0=6;MQRankSum=-1.394;QD=18.72;ReadPosRankSum=1.253;VQSLOD=3.9169;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,19:29:50.22:518,50,0	0/0:14,0:14:35.75:0,36,373	0/0:48,0:23:27.08:0,27,336	0/0:47,1:19:5.57:0,6,186	0/0:28,0:28:80.53:0,81,866	0/0:27,0:27:69.66:0,70,784	0/0:12,0:12:30.05:0,30,315	0/0:27,0:27:75.20:0,75,845	0/0:10,0:11:32.61:0,33,315	1/1:4,13:17:43.78:380,44,0	1/1:3,9:12:27:243,27,0	0/0:17,0:17:45.07:0,45,477	0/0:16,1:17:15.13:0,15,423	0/0:17,0:17:39.12:0,39,450	0/0:16,0:16:36.08:0,36,391	0/0:15,0:15:38.27:0,38,463	1/1:5,24:28:74.98:676,75,0	0/0:22,0:22:24.05:0,24,261	0/0:29,2:31:20.29:0,20,741	0/0:16,0:16:39.12:0,39,450	0/0:13,0:13:39.12:0,39,450	0/0:12,1:13:5.59:0,6,296	0/0:19,0:19:47.49:0,47,512	0/0:21,0:21:52:0,52,561	1/1:5,28:33:65.74:604,66,0	0/0:25,0:25:63.19:0,63,727	0/0:30,0:31:84.63:0,85,895	0/0:12,0:12:27.07:0,27,302
chr10	72663645	.	T	TAA	538.25	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.488;DP=602;FS=7.895;HRun=0;HaplotypeScore=89.0948;InbreedingCoeff=0.9915;MQ=84.43;MQ0=2;MQRankSum=-1.175;QD=20.70;ReadPosRankSum=0.472;VQSLOD=3.6727;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,19:26:44.71:633,45,0	0/0:7,0:7:18.03:0,18,264	0/0:33,0:27:54.14:0,54,746	0/0:24,0:21:53.15:0,53,576	0/0:12,0:12:36.12:0,36,581	0/0:22,0:22:66.23:0,66,1072	0/0:27,0:27:78.23:0,78,1202	0/0:38,0:38:99:0,108,1570	0/0:14,0:14:42.14:0,42,674	0/0:22,0:22:56.51:0,57,347	0/0:21,0:21:54.44:0,54,369	0/0:26,0:26:78.27:0,78,1270	0/0:17,0:17:51.13:0,51,754	0/0:20,0:20:60.20:0,60,963	0/0:26,0:26:78.27:0,78,1265	0/0:19,0:19:57.18:0,57,905	0/0:33,0:33:70.57:0,71,578	0/0:20,0:20:51.81:0,52,374	0/0:18,0:18:50.54:0,51,782	0/0:26,0:26:78.26:0,78,1237	0/0:13,0:13:39.13:0,39,632	0/0:13,0:13:39.13:0,39,632	0/0:19,0:19:54.18:0,54,874	0/0:12,0:12:33.11:0,33,523	0/0:18,0:18:51.34:0,51,317	0/0:29,0:29:80.53:0,81,1264	0/0:29,0:29:87.28:0,87,1390	0/0:18,0:18:54.17:0,54,847
chr10	72664114	.	A	AT	2583.23	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.530;DP=630;FS=4.728;HRun=8;HaplotypeScore=58.2838;InbreedingCoeff=0.9791;MQ=81.02;MQ0=0;MQRankSum=-1.174;QD=24.84;ReadPosRankSum=2.339;VQSLOD=4.6138;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.01:0,69,625	0/0:5,0:5:15.01:0,15,137	0/0:22,0:22:55.01:0,55,479	0/0:17,0:17:9.73:0,10,246	0/0:33,0:33:90.04:0,90,823	0/0:27,0:27:63.01:0,63,577	0/0:17,0:17:48.02:0,48,436	0/0:30,0:30:76.57:0,77,684	0/0:27,0:27:71.99:0,72,650	1/1:4,16:20:23.68:526,24,0	1/1:6,16:22:48.05:518,48,0	0/0:26,0:26:72.03:0,72,659	0/0:26,0:26:66.01:0,66,600	0/0:21,0:21:60.03:0,60,549	0/0:26,0:26:69.02:0,69,632	0/0:24,0:24:66.03:0,66,604	1/1:1,38:39:87.26:1004,87,0	0/0:12,0:12:23.95:0,24,210	0/0:36,0:36:96.04:0,96,875	0/0:7,0:7:21.01:0,21,192	0/0:10,0:10:27.01:0,27,247	0/0:14,0:14:36.02:0,36,329	0/0:21,0:21:60.02:0,60,544	0/0:24,0:24:69.04:0,69,631	1/1:1,22:23:61.42:695,61,0	0/0:27,0:27:72.03:0,72,659	0/0:38,0:38:99:0,105,961	0/0:11,0:11:33.02:0,33,302
chr10	72664454	.	A	AAT	339.32	PASS	AB=1.000;AC=7;AF=0.167;AN=42;BaseQRankSum=2.795;DP=187;FS=2.664;HRun=0;HaplotypeScore=36.6173;InbreedingCoeff=0.4468;MQ=84.33;MQ0=3;MQRankSum=0.431;QD=7.54;ReadPosRankSum=0.364;VQSLOD=2.7961;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:11,0:7:0.81:0,1,2	0/1:30,0:15:2.49:2,0,45	0/0:6,0:6:6.02:0,6,74	0/0:7,0:7:21.07:0,21,260	./.	0/0:45,0:45:87.25:0,87,1045	0/0:3,0:3:9.03:0,9,111	0/0:4,0:4:8.39:0,8,40	0/0:6,0:6:2.80:0,3,13	0/0:2,0:2:3.01:0,3,37	1/1:4,0:4:0.47:1,0,0	0/0:5,0:5:12.04:0,12,148	0/0:5,0:5:12.04:0,12,148	0/0:4,0:4:9.03:0,9,112	0/0:7,0:7:11.19:0,11,53	1/1:4,6:10:27.09:427,27,0	0/0:4,0:4:6.02:0,6,74	./.	./.	./.	./.	1/1:1,0:1:1.82:5,2,0	0/0:5,0:5:8.39:0,8,40	0/0:4,0:4:9.02:0,9,103	0/0:4,0:4:12.02:0,12,135	0/0:10,0:10:21.07:0,21,259
chr10	72664455	.	ATATATATATATATG	A	1231.01	PASS	AC=8;AF=0.190;AN=42;BaseQRankSum=4.419;DP=182;FS=12.167;HRun=0;HaplotypeScore=74.2247;InbreedingCoeff=0.6437;MQ=84.90;MQ0=3;MQRankSum=-4.606;QD=55.96;ReadPosRankSum=1.459;VQSLOD=2.2076;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:11,0:7:2.63:0,3,9	0/0:30,0:15:11.95:0,12,156	0/0:5,0:5:6.02:0,6,411	0/0:7,0:7:21.07:0,21,1304	./.	0/0:44,0:44:90.27:0,90,4442	0/0:3,0:3:9.03:0,9,383	1/1:0,4:4:12.03:389,12,0	1/1:5,1:6:3.01:121,3,0	0/0:2,0:2:6.02:0,6,231	0/0:3,0:3:3.01:0,3,182	0/0:5,0:5:12.04:0,12,674	0/0:5,0:5:12.02:0,12,640	0/0:4,0:4:9.03:0,9,615	1/1:3,4:7:12.04:485,12,0	0/0:10,0:10:24.97:0,25,1141	0/0:5,0:5:9.03:0,9,471	./.	./.	./.	./.	0/0:1,0:1:3.01:0,3,182	1/1:2,3:5:9.03:364,9,0	0/0:4,0:4:9.03:0,9,496	0/0:4,0:4:12.02:0,12,640	0/0:10,0:10:21.07:0,21,1084
chr10	72664469	.	G	GTA	406.60	PASS	AB=1.000;AC=14;AF=0.304;AN=46;BaseQRankSum=3.447;DP=163;FS=1.024;HRun=0;HaplotypeScore=37.4047;InbreedingCoeff=0.3213;MQ=69.88;MQ0=3;MQRankSum=-2.054;QD=8.84;ReadPosRankSum=-0.129;VQSLOD=3.0146;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:2,0:2:6:0,6,60	0/1:7,0:3:0.11:0,0,0	0/0:24,0:9:0.85:0,1,5	0/0:3,0:3:9.03:0,9,110	0/0:8,0:8:21.05:0,21,244	./.	0/0:33,0:37:83.73:0,84,925	0/0:3,0:3:3.01:0,3,37	0/1:7,0:7:19.94:43,0,20	1/1:4,0:4:1.62:18,2,0	1/1:1,2:3:3.01:49,3,0	1/1:3,0:3:3.01:48,3,0	0/0:4,0:4:9.03:0,9,110	0/0:4,0:4:9.03:0,9,110	0/0:3,0:3:9.03:0,9,110	0/1:7,0:7:29.65:30,0,37	1/1:3,6:9:18.06:288,18,0	0/0:3,0:3:6.02:0,6,73	./.	0/0:1,0:1:3.01:0,3,36	./.	./.	1/1:0,1:1:3.01:49,3,0	0/1:5,0:5:18.20:18,0,27	0/0:4,0:4:6.02:0,6,73	0/0:7,0:7:18.06:0,18,217	0/0:13,0:13:30.04:0,30,320
chr10	72668429	.	CGTGGTGCACAGCAGCTTGGTGCACAGCAGT	C	1008.12	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=1.553;DP=745;FS=0.616;HRun=0;HaplotypeScore=506.2095;InbreedingCoeff=0.4785;MQ=72.42;MQ0=1;MQRankSum=0.850;QD=6.42;ReadPosRankSum=1.463;VQSLOD=0.3279;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:36:99:192,0,4655	0/0:10,0:10:27.08:0,27,1546	0/0:12,0:12:4.36:0,4,255	0/0:20,0:19:12.67:0,13,241	0/0:11,0:11:21.07:0,21,2172	0/0:23,0:23:51.17:0,51,3940	0/0:54,0:54:99:0,135,6457	0/0:19,0:19:39.09:0,39,861	0/0:25,0:25:60.16:0,60,4661	1/1:11,0:11:11.04:245,11,0	1/1:2,0:2:6.02:89,6,0	0/0:60,0:60:99:0,147,13561	0/0:33,0:33:87.23:0,87,7611	0/0:44,0:44:99:0,108,8919	0/0:20,0:20:48.11:0,48,2035	0/0:24,0:24:66.17:0,66,5031	1/1:4,29:33:3.01:232,3,0	0/1:31,0:31:99:218,0,4569	0/0:15,0:15:30.05:0,30,841	0/0:10,0:10:21.05:0,21,1442	0/0:112,0:111:99:0,277,16340	0/0:18,0:18:30.07:0,30,1783	0/0:9,0:9:23.99:0,24,1269	0/0:47,0:47:99:0,123,9020	1/1:2,16:18:3.01:155,3,0	0/1:26,0:26:24.52:25,0,3710	0/0:19,0:19:51.14:0,51,3798	0/0:3,0:3:5.94:0,6,600
chr10	72669367	.	A	ACGGT	3367.48	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-9.329;DP=888;FS=0.579;HRun=0;HaplotypeScore=148.4792;InbreedingCoeff=0.9992;MQ=82.52;MQ0=0;MQRankSum=-4.741;QD=55.20;ReadPosRankSum=2.149;VQSLOD=4.7262;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,48:61:99:3367,129,0	0/0:12,0:12:30.10:0,30,545	0/0:29,0:29:75.24:0,75,1328	0/0:21,0:21:48.13:0,48,810	0/0:33,0:33:90.29:0,90,1605	0/0:30,0:30:81.28:0,81,1464	0/0:38,0:38:99:0,111,1965	0/0:37,0:37:99:0,99,1795	0/0:17,0:17:45.15:0,45,819	0/0:26,0:26:60.21:0,60,1089	0/0:15,0:15:39.13:0,39,709	0/0:43,0:43:99:0,117,2116	0/0:41,0:41:96.33:0,96,1735	0/0:28,0:28:75.24:0,75,1334	0/0:52,0:51:99:0,135,2445	0/0:30,0:30:78.25:0,78,1369	0/0:30,0:30:81.28:0,81,1469	0/0:34,0:34:96.22:0,96,1644	0/0:30,0:30:74.92:0,75,1344	0/0:22,0:22:57.18:0,57,997	0/0:55,0:55:99:0,141,2512	0/0:39,0:39:99:0,105,1907	0/0:32,0:32:90.31:0,90,1635	0/0:31,0:31:87.30:0,87,1572	0/0:29,0:29:84.27:0,84,1487	0/0:32,0:32:90.31:0,90,1630	0/0:30,0:30:72.23:0,72,1280	0/0:11,0:11:33.11:0,33,600
chr10	72671135	.	A	AAG	2284.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-9.084;DP=718;FS=18.617;HRun=0;HaplotypeScore=83.9962;InbreedingCoeff=0.9433;MQ=77.84;MQ0=0;MQRankSum=-4.410;QD=43.10;ReadPosRankSum=2.384;VQSLOD=3.5487;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,48:53:99:2379,135,0	0/0:9,0:9:24.08:0,24,330	0/0:31,0:30:75.54:0,76,969	0/0:29,0:28:51.11:0,51,766	0/0:13,0:13:39.12:0,39,520	0/0:21,0:21:57.18:0,57,766	0/0:26,0:26:72.24:0,72,988	0/0:26,0:26:66.20:0,66,869	0/0:27,0:27:72.24:0,72,989	0/0:29,0:29:84.20:0,84,1117	0/0:14,0:14:42.13:0,42,563	0/0:28,0:28:81.21:0,81,1061	0/0:23,0:23:60.19:0,60,808	0/0:32,0:32:90.28:0,90,1219	0/0:24,0:24:72.23:0,72,973	0/0:34,0:34:93.30:0,93,1264	0/0:34,0:33:96.28:0,96,1268	0/0:34,0:34:99:0,99,1358	0/0:22,0:22:63.17:0,63,830	0/0:20,0:20:48.15:0,48,645	0/0:39,0:39:99:0,99,1360	0/0:32,0:32:93.27:0,93,1217	0/0:12,0:12:36.12:0,36,495	0/0:21,0:21:57.14:0,57,746	0/0:28,0:28:81.25:0,81,1070	0/0:25,0:25:72.22:0,72,947	0/0:29,0:28:87.25:0,87,1161	0/0:3,0:3:9.03:0,9,124
chr10	72671835	.	G	GA	327.21	PASS	AB=0.950;AC=5;AF=0.089;AN=56;BaseQRankSum=5.605;DP=612;FS=3.305;HRun=11;HaplotypeScore=75.6696;InbreedingCoeff=0.3449;MQ=74.19;MQ0=0;MQRankSum=-0.652;QD=3.94;ReadPosRankSum=-1.906;VQSLOD=0.5722;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:21:27.37:415,27,0	0/0:12,0:12:29.83:0,30,228	0/0:13,0:11:12.40:0,12,90	0/0:17,0:17:10.74:0,11,130	0/0:27,0:27:59.63:0,60,457	0/0:25,0:26:64.74:0,65,491	0/0:17,0:18:37.85:0,38,279	0/0:25,0:25:38.72:0,39,298	0/0:29,0:29:70.18:0,70,535	0/0:24,0:24:50.75:0,51,392	0/1:12,0:13:4.22:4,0,105	0/1:22,2:24:11.41:11,0,277	0/0:26,1:28:40.30:0,40,486	0/0:24,1:26:3.55:0,4,319	0/0:20,0:22:51.77:0,52,376	0/0:22,1:24:33.40:0,33,422	0/0:22,0:23:58.79:0,59,447	0/0:17,0:17:47.80:0,48,371	0/0:19,0:21:21.92:0,22,316	0/0:27,0:27:30.05:0,30,331	0/0:18,0:18:22.09:0,22,183	0/0:21,0:21:50.76:0,51,395	0/0:21,0:20:23.15:0,23,240	0/0:12,0:12:26.87:0,27,209	0/0:19,0:20:52.76:0,53,395	0/1:23,2:25:7.14:7,0,316	0/0:34,1:37:76.14:0,76,686	0/0:21,0:21:47.74:0,48,370
chr10	72672149	.	GGAGAGGGAGAGAGAGAGAGAGAGA	G	1395.17	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=-0.306;DP=500;FS=19.466;HRun=0;HaplotypeScore=240.8952;InbreedingCoeff=0.6027;MQ=46.40;MQ0=42;MQRankSum=5.122;QD=11.82;ReadPosRankSum=-1.200;VQSLOD=0.9606;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:13:1.51:17,2,0	0/0:9,0:7:15.83:0,16,473	0/0:13,0:6:8.83:0,9,59	0/0:14,0:5:8.89:0,9,61	0/0:12,0:12:15.03:0,15,561	0/0:21,0:21:43.36:0,43,1298	0/0:25,0:22:39.03:0,39,326	0/0:25,0:23:8.78:0,9,213	0/0:20,0:17:40.08:0,40,626	0/0:22,0:20:47.58:0,48,1163	0/0:10,0:10:9.48:0,9,243	0/1:20,0:20:2.75:109,0,3	1/1:4,17:19:2.69:181,3,0	0/0:23,0:22:49.19:0,49,1398	0/0:24,0:22:41.13:0,41,1005	0/0:24,0:24:59.81:0,60,1080	0/0:14,0:12:18.85:0,19,164	0/0:15,0:13:29.87:0,30,867	0/0:18,0:17:48.82:0,49,1578	0/0:15,0:15:29.30:0,29,280	0/0:21,0:16:30.06:0,30,1551	1/1:13,0:11:4.22:42,4,0	0/1:21,0:19:54.31:250,0,54	1/1:27,0:23:51.32:939,51,0	0/0:20,0:19:39.08:0,39,710	0/0:17,0:15:39.10:0,39,1067	0/0:10,0:10:22.21:0,22,494	0/0:10,0:9:24.03:0,24,578
chr10	72673819	.	GC	G	3757.81	PASS	AB=0.906;AC=9;AF=0.161;AN=56;BaseQRankSum=10.600;DP=715;FS=3.608;HRun=1;HaplotypeScore=67.4931;InbreedingCoeff=0.8671;MQ=82.21;MQ0=0;MQRankSum=-1.621;QD=30.30;ReadPosRankSum=1.137;VQSLOD=3.4078;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,147,2312	0/0:8,0:8:24.08:0,24,384	0/0:21,0:21:63.21:0,63,994	0/0:26,0:26:67.03:0,67,1047	0/0:24,0:24:72.24:0,72,1122	0/0:19,0:19:57.19:0,57,911	0/0:32,0:32:93.32:0,93,1456	0/0:26,0:26:78.26:0,78,1225	0/0:24,0:24:72.23:0,72,1121	1/1:0,25:25:75.25:1043,75,0	1/1:0,23:23:60.20:830,60,0	0/0:22,0:22:66.22:0,66,1050	0/0:21,0:21:63.21:0,63,995	0/0:25,0:25:75.26:0,75,1197	0/0:38,0:38:99:0,114,1794	0/0:29,0:29:87.30:0,87,1384	1/1:0,31:31:90.30:1259,90,0	0/0:27,0:27:81.28:0,81,1279	0/0:27,0:27:81.25:0,81,1231	0/0:21,0:21:63.20:0,63,982	0/0:35,0:35:99:0,105,1653	0/0:25,0:25:75.25:0,75,1165	0/0:15,0:15:45.15:0,45,715	0/0:37,0:37:99:0,111,1735	1/1:0,16:16:42.14:587,42,0	0/1:26,3:28:38.67:39,0,1089	0/0:26,0:26:78.27:0,78,1237	0/0:14,0:14:42.14:0,42,671
chr10	72676117	.	C	CAG	1309.48	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.011;DP=731;FS=7.744;HRun=0;HaplotypeScore=84.9833;InbreedingCoeff=0.9958;MQ=84.57;MQ0=1;MQRankSum=-5.828;QD=46.77;ReadPosRankSum=0.255;VQSLOD=4.4702;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:75.26:1404,75,0	0/0:7,0:7:21.07:0,21,309	0/0:24,0:24:66.22:0,66,946	0/0:22,0:22:38.20:0,38,834	0/0:39,0:39:99:0,111,1634	0/0:28,0:28:84.27:0,84,1217	0/0:20,0:20:57.19:0,57,839	0/0:40,0:40:99:0,108,1574	0/0:16,0:16:39.10:0,39,536	0/0:27,0:27:75.25:0,75,1105	0/0:31,0:31:93.31:0,93,1368	0/0:25,0:25:63.21:0,63,927	0/0:22,0:22:63.21:0,63,927	0/0:22,0:22:63.21:0,63,927	0/0:27,0:27:78.25:0,78,1129	0/0:26,0:26:78.26:0,78,1148	0/0:20,0:20:57.17:0,57,816	0/0:33,0:33:99:0,99,1436	0/0:25,0:25:72.23:0,72,1042	0/0:24,0:24:72.24:0,72,1060	0/0:35,0:35:99:0,102,1499	0/0:27,0:27:81.27:0,81,1190	0/0:23,0:23:69.23:0,69,1003	0/0:21,0:21:60.20:0,60,883	0/0:19,0:19:57.19:0,57,839	0/0:40,0:40:90.53:0,91,1636	0/0:34,0:33:99:0,102,1401	0/0:26,0:26:72.23:0,72,1037
chr10	72680678	.	A	ATAACGACGG	16209.33	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-4.408;DP=801;FS=6.134;HRun=0;HaplotypeScore=207.6174;InbreedingCoeff=0.8865;MQ=81.19;MQ0=0;MQRankSum=-17.647;QD=80.24;ReadPosRankSum=-0.263;VQSLOD=4.1748;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,25:53:99:4145,114,0	0/0:20,0:20:60.21:0,60,1846	0/0:32,0:32:90.21:0,90,2413	0/0:32,0:32:80.84:0,81,2254	0/0:28,0:28:84.27:0,84,2525	0/0:25,0:25:72.25:0,72,2202	0/0:28,0:28:81.28:0,81,2457	0/0:29,0:29:87.29:0,87,2596	0/0:36,0:36:99:0,99,3059	1/1:9,25:35:99:4668,102,0	1/1:7,16:25:54.10:2296,54,0	0/0:29,0:29:84.29:0,84,2621	0/0:20,0:20:60.21:0,60,1772	0/0:30,0:30:87.27:0,87,2573	0/0:37,0:37:99:0,108,3307	0/0:34,0:34:96.32:0,96,2838	1/1:8,11:24:48.12:2122,48,0	0/0:23,0:23:69.24:0,69,2147	0/0:25,0:25:66.21:0,66,1911	0/0:20,0:20:60.21:0,60,1878	0/0:40,0:40:99:0,117,3606	0/0:26,0:26:72.25:0,72,2267	0/0:15,0:15:45.15:0,45,1388	0/0:27,0:27:81.28:0,81,2485	1/1:7,16:26:66.18:2944,66,0	0/1:39,0:39:33.57:34,0,3328	0/0:34,0:34:99:0,102,3110	0/0:9,0:9:24.08:0,24,759
chr10	72681538	.	GGCTGAA	G	1939.53	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.690;DP=724;FS=0.681;HRun=0;HaplotypeScore=148.3230;InbreedingCoeff=0.9960;MQ=81.34;MQ0=1;MQRankSum=-8.696;QD=46.18;ReadPosRankSum=-0.192;VQSLOD=3.6808;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,39:42:90.31:2034,90,0	0/0:9,0:9:27.09:0,27,901	0/0:25,0:25:42.62:0,43,1356	0/0:14,0:14:27.76:0,28,911	0/0:19,0:19:48.16:0,48,1633	0/0:29,0:29:81.28:0,81,2771	0/0:25,0:25:66.23:0,66,2249	0/0:27,0:27:66.22:0,66,2167	0/0:27,0:27:78.27:0,78,2666	0/0:40,0:40:99:0,114,3819	0/0:23,0:23:63.22:0,63,2178	0/0:26,0:26:72.25:0,72,2451	0/0:26,0:26:75.26:0,75,2506	0/0:30,0:30:75.26:0,75,2528	0/0:33,0:33:87.28:0,87,2898	0/0:24,0:24:69.22:0,69,2300	0/0:28,0:28:78.27:0,78,2603	0/0:25,0:25:75.26:0,75,2598	0/0:20,0:20:48.16:0,48,1568	0/0:26,0:26:78.25:0,78,2623	0/0:48,0:47:99:0,129,4375	0/0:30,0:30:84.29:0,84,2853	0/0:17,0:17:45.15:0,45,1448	0/0:31,0:31:93.32:0,93,3198	0/0:20,0:20:54.19:0,54,1861	0/0:28,0:28:81.28:0,81,2798	0/0:24,0:24:66.23:0,66,2207	0/0:8,0:8:24.03:0,24,587
chr10	72681682	.	GAGCC	G	5278.04	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.269;DP=613;FS=0.409;HRun=0;HaplotypeScore=107.5832;InbreedingCoeff=0.9904;MQ=77.36;MQ0=0;MQRankSum=-2.949;QD=45.50;ReadPosRankSum=4.359;VQSLOD=5.2068;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,2522	0/0:13,0:13:33.11:0,33,805	0/0:17,0:17:45.15:0,45,1141	0/0:11,0:11:25.60:0,26,629	0/0:16,0:16:42.14:0,42,1057	0/0:18,0:18:51.18:0,51,1347	0/0:26,0:26:63.20:0,63,1580	0/0:26,0:26:54.17:0,54,1286	0/0:17,0:17:39.12:0,39,985	1/1:4,23:27:66.23:1211,66,0	1/1:0,10:10:17.98:331,18,0	0/0:26,0:26:72.25:0,72,1851	0/0:24,0:24:69.24:0,69,1730	0/0:20,0:20:57.20:0,57,1461	0/0:19,0:19:54.19:0,54,1408	0/0:15,0:15:45.15:0,45,1200	1/1:0,29:29:78.27:1453,78,0	1/1:2,29:31:78.27:1456,78,0	0/0:21,0:21:63.21:0,63,1513	0/0:16,0:16:42.13:0,42,1020	0/0:69,0:68:99:0,190,4762	0/0:15,0:15:45.15:0,45,1094	0/0:12,0:12:33.09:0,33,749	0/0:39,0:39:99:0,111,2809	1/1:1,18:19:45.15:827,45,0	0/0:12,0:12:33.11:0,33,841	0/0:23,0:22:66.23:0,66,1675	0/0:4,0:4:12.04:0,12,320
chr10	72682176	.	CT	C	1787.89	PASS	AB=0.849;AC=15;AF=0.268;AN=56;BaseQRankSum=10.285;DP=546;FS=0.799;HRun=12;HaplotypeScore=58.2710;InbreedingCoeff=0.5077;MQ=70.17;MQ0=0;MQRankSum=0.420;QD=7.71;ReadPosRankSum=2.960;VQSLOD=2.1754;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:32,5:37:5.82:6,0,650	0/1:7,2:9:22.42:22,0,159	0/0:17,0:13:17.07:0,17,164	0/0:8,0:7:7.97:0,8,44	0/0:28,0:29:39.75:0,40,563	0/0:9,1:10:6.83:0,7,251	0/0:13,0:14:35.87:0,36,339	0/1:29,5:35:41.92:42,0,534	0/0:12,1:13:12.68:0,13,282	1/1:4,15:20:19.39:322,19,0	1/1:4,18:27:31.43:382,31,0	0/0:18,0:18:51.08:0,51,505	0/1:9,2:12:19.30:19,0,163	0/0:23,0:23:37.16:0,37,419	0/0:16,1:17:21.85:0,22,403	0/0:11,0:11:24.05:0,24,244	1/1:1,24:28:63.84:476,64,0	1/1:7,1:27:38.55:138,39,0	0/0:20,1:21:18.83:0,19,362	0/0:31,3:35:28.18:0,28,745	0/0:9,0:9:27.04:0,27,268	0/0:9,0:9:24.04:0,24,239	0/0:12,0:12:31.88:0,32,310	0/1:4,1:5:11.20:11,0,79	1/1:3,26:32:74.83:553,75,0	0/0:27,4:32:16.55:0,17,690	0/0:20,1:21:30.77:0,31,466	0/0:8,3:15:2.39:0,2,196
chr10	72682619	.	C	CA	620.30	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.428;DP=804;FS=2.986;HRun=6;HaplotypeScore=87.0414;InbreedingCoeff=0.9959;MQ=69.24;MQ0=0;MQRankSum=-2.650;QD=29.54;ReadPosRankSum=1.150;VQSLOD=4.1983;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1009	0/0:9,0:9:21.04:0,21,214	0/0:38,0:37:86.44:0,86,839	0/0:28,0:28:53.02:0,53,586	0/0:32,0:32:74.71:0,75,764	0/0:26,0:26:66.07:0,66,673	0/0:16,0:16:42.07:0,42,421	0/0:36,0:36:84.18:0,84,856	0/0:21,0:21:57.13:0,57,581	0/0:37,0:37:99:0,99,1001	0/0:31,0:31:81.18:0,81,824	0/0:24,0:24:72.16:0,72,735	0/0:30,0:30:84.15:0,84,842	0/0:37,0:37:99:0,102,1040	0/0:23,0:23:63.14:0,63,643	0/0:36,0:36:93.20:0,93,949	0/0:36,0:36:99:0,99,1009	1/1:0,21:21:57.18:715,57,0	0/0:22,0:21:57.11:0,57,576	0/0:39,0:39:96.21:0,96,979	0/0:35,0:35:93.15:0,93,926	0/0:19,0:19:48.11:0,48,490	0/0:19,0:19:54.12:0,54,551	0/0:36,0:36:99:0,99,1010	0/0:36,0:36:90.20:0,90,918	0/0:42,0:42:99:0,117,1187	0/0:26,0:26:75.17:0,75,765	0/0:15,0:15:45.10:0,45,459
chr10	72683490	.	AAGAG	A	3771.43	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.171;DP=586;FS=6.536;HRun=0;HaplotypeScore=101.4648;InbreedingCoeff=0.9956;MQ=68.74;MQ0=2;MQRankSum=-0.912;QD=40.55;ReadPosRankSum=3.534;VQSLOD=3.9868;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:78.25:0,78,1930	0/0:6,0:6:18.06:0,18,468	0/0:32,0:28:77.51:0,78,1779	0/0:27,0:22:47.67:0,48,1051	0/0:29,0:29:87.28:0,87,2188	0/0:11,0:11:33.11:0,33,857	0/0:20,0:20:48.15:0,48,1165	0/0:34,0:34:90.28:0,90,2234	0/0:15,0:15:42.11:0,42,977	1/1:2,23:25:69.21:1184,69,0	1/1:1,15:16:33.11:593,33,0	0/0:13,0:13:33.10:0,33,804	0/0:12,0:12:24.07:0,24,568	0/0:14,0:14:36.12:0,36,935	0/0:16,0:16:39.13:0,39,1013	0/0:20,0:20:57.18:0,57,1428	1/1:2,27:28:63.22:1132,63,0	0/0:27,0:26:72.25:0,72,1868	0/0:14,0:14:36.10:0,36,858	0/0:17,0:17:42.14:0,42,1062	0/0:26,0:26:75.26:0,75,1933	0/0:18,0:18:51.18:0,51,1324	0/0:25,0:25:66.21:0,66,1657	0/0:12,0:12:30.10:0,30,779	1/1:1,22:21:48.16:863,48,0	0/0:33,0:33:93.79:0,94,2330	0/0:30,0:31:90.06:0,90,2164	0/0:8,0:8:21.07:0,21,537
chr10	72683535	.	C	CA	1690.89	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-6.321;DP=536;FS=1.775;HRun=8;HaplotypeScore=67.6322;InbreedingCoeff=0.9958;MQ=66.03;MQ0=1;MQRankSum=-0.614;QD=21.68;ReadPosRankSum=-0.306;VQSLOD=3.6694;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.03:0,60,549	0/0:9,0:9:27.01:0,27,247	0/0:16,0:14:26.28:0,26,208	0/0:16,0:16:35.60:0,36,267	0/0:26,0:26:69.03:0,69,632	0/0:22,0:22:57.02:0,57,522	0/0:14,0:14:35.97:0,36,321	0/0:31,0:31:72.01:0,72,655	0/0:15,0:15:35.99:0,36,325	0/0:17,0:17:33:0,33,302	0/0:16,0:16:42.01:0,42,383	1/1:2,8:10:24.07:277,24,0	1/1:2,10:12:18.04:199,18,0	0/0:16,0:16:22.44:0,22,335	0/0:12,0:12:33:0,33,298	0/0:25,0:25:72.04:0,72,659	0/0:24,0:24:57:0,57,515	0/0:20,0:20:44.88:0,45,412	0/0:14,0:14:30:0,30,275	0/0:20,0:20:57.03:0,57,521	0/0:15,0:15:42.01:0,42,379	1/1:4,15:19:45.13:519,45,0	1/1:7,17:24:51.07:559,51,0	1/1:1,12:13:27.08:312,27,0	0/0:28,0:27:62.51:0,63,546	0/0:27,0:27:72:0,72,656	0/0:39,0:39:99:0,111,1011	0/0:12,0:12:36.02:0,36,329
chr10	72683663	.	A	AAC	2398.82	PASS	AB=0.903;AC=23;AF=0.426;AN=54;BaseQRankSum=2.477;DP=552;FS=1.082;HRun=0;HaplotypeScore=92.0861;InbreedingCoeff=0.6611;MQ=56.94;MQ0=6;MQRankSum=-2.527;QD=8.33;ReadPosRankSum=1.957;VQSLOD=3.3043;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:41:5.96:45,6,0	0/0:8,0:9:20.89:0,21,222	0/0:31,0:12:3.44:0,3,34	./.	0/0:23,0:25:38.78:0,39,404	0/0:17,0:17:18.17:0,18,332	0/0:6,0:6:6.02:0,6,69	0/1:43,0:47:10.08:10,0,499	0/0:12,0:12:18.05:0,18,208	1/1:10,1:10:6:54,6,0	1/1:13,0:15:9:78,9,0	1/1:4,5:10:3.48:48,3,0	0/1:10,7:17:22.62:128,0,23	0/0:7,0:7:12.04:0,12,139	0/0:13,0:15:29.71:0,30,305	0/0:16,0:18:38.78:0,39,409	1/1:15,0:19:16.56:145,17,0	1/1:12,0:32:54:488,54,0	0/0:12,0:11:15.01:0,15,159	0/0:24,0:25:47.97:0,48,533	0/1:16,0:16:10.85:11,0,229	1/1:6,11:17:33.11:498,33,0	1/1:4,14:19:15.95:406,16,0	1/1:5,18:22:39.13:606,39,0	1/1:14,1:19:9.88:81,10,0	0/0:28,0:28:65.67:0,66,726	0/0:33,0:33:75.22:0,75,866	0/0:9,0:8:18.03:0,18,196
chr10	72683944	.	T	TGATA	3179.81	PASS	AB=0.829;AC=18;AF=0.360;AN=50;BaseQRankSum=-3.516;DP=626;FS=3.644;HRun=0;HaplotypeScore=119.7221;InbreedingCoeff=0.7460;MQ=59.19;MQ0=3;MQRankSum=-0.402;QD=15.00;ReadPosRankSum=-0.233;VQSLOD=3.3771;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:43:18.04:237,18,0	0/0:7,0:11:5.96:0,6,47	./.	./.	0/0:13,0:30:41.95:0,42,369	0/0:26,0:26:33.11:0,33,480	0/0:24,0:24:15.51:0,16,198	./.	0/0:22,0:22:27.09:0,27,406	0/0:13,0:23:29.99:0,30,267	0/0:14,0:21:14.14:0,14,138	1/1:13,0:21:24.08:415,24,0	0/0:19,0:19:15.04:0,15,205	1/1:11,7:18:15.05:346,15,0	0/0:22,0:22:33.08:0,33,450	0/0:27,0:27:45.14:0,45,651	0/1:17,0:17:56.38:56,0,117	0/0:17,0:22:3:0,3,28	0/0:21,0:20:18.04:0,18,234	0/0:28,0:28:42.13:0,42,611	0/0:20,0:21:24.07:0,24,344	1/1:10,7:17:15.03:345,15,0	1/1:8,7:15:21.07:465,21,0	1/1:11,6:17:6.02:138,6,0	0/1:11,10:22:20.96:457,0,21	1/1:18,2:29:27.09:496,27,0	0/0:43,0:43:66.16:0,66,903	1/1:4,6:11:18.06:415,18,0
chr10	72684403	.	A	AAGAAGAAAGCTGCAA	3162.45	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.998;DP=690;FS=10.011;HRun=0;HaplotypeScore=267.9655;InbreedingCoeff=0.9999;MQ=90.57;MQ0=0;MQRankSum=-7.540;QD=77.13;ReadPosRankSum=-1.954;VQSLOD=1.8732;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,1:41:57.15:3257,57,0	0/0:13,0:13:39.13:0,39,1652	0/0:31,0:31:84.25:0,84,2701	0/0:24,0:24:59.78:0,60,1461	0/0:34,0:34:99:0,99,3987	0/0:33,0:33:96.33:0,96,3894	0/0:19,0:19:51.16:0,51,1990	0/0:27,0:27:63.19:0,63,1873	0/0:18,0:18:54.17:0,54,2026	0/0:32,0:32:90.29:0,90,3665	0/0:26,0:26:69.24:0,69,2674	0/0:14,0:14:42.14:0,42,1846	0/0:18,0:18:51.16:0,51,2101	0/0:24,0:24:57.71:0,58,2487	0/0:28,0:28:84.27:0,84,3111	0/0:20,0:20:60.21:0,60,2270	0/0:24,0:24:72.22:0,72,2684	0/0:22,0:22:63.16:0,63,2382	0/0:21,0:21:57.18:0,57,2166	0/0:23,0:23:69.24:0,69,2821	0/0:29,0:29:84.29:0,84,3574	0/0:18,0:18:51.16:0,51,2071	0/0:28,0:28:78.27:0,78,3127	0/0:20,0:20:57.19:0,57,2299	0/0:24,0:24:66.23:0,66,2533	0/0:33,0:33:96.33:0,96,4011	0/0:28,0:28:84.27:0,84,3243	0/0:18,0:18:51.17:0,51,2223
chr10	72684583	.	AC	A	4262.57	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.992;DP=655;FS=0.388;HRun=1;HaplotypeScore=63.5555;InbreedingCoeff=0.9951;MQ=81.66;MQ0=0;MQRankSum=-1.703;QD=39.11;ReadPosRankSum=-0.355;VQSLOD=5.0943;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,1965	0/0:9,0:9:27.07:0,27,407	0/0:20,1:21:60.18:0,60,896	0/0:13,0:13:36.12:0,36,548	0/0:26,0:26:78.27:0,78,1239	0/0:16,0:16:48.16:0,48,767	0/0:15,0:15:45.11:0,45,670	0/0:31,0:31:93.32:0,93,1486	0/0:30,0:30:90.29:0,90,1410	1/1:0,33:33:96.31:1326,96,0	1/1:0,15:15:45.11:607,45,0	0/0:23,0:23:69.22:0,69,1075	0/0:20,0:20:60.17:0,60,912	0/0:34,0:34:99:0,99,1580	0/0:32,0:32:96.33:0,96,1532	0/0:35,0:35:99:0,105,1676	1/1:0,36:36:93.28:1280,93,0	0/0:26,0:26:78.27:0,78,1247	0/0:15,0:15:42.14:0,42,670	0/0:24,0:24:72.25:0,72,1150	0/0:27,0:27:81.28:0,81,1295	0/0:10,0:10:30.10:0,30,479	0/0:21,0:21:63.17:0,63,979	0/0:19,0:19:57.18:0,57,887	1/1:0,25:25:75.25:1049,75,0	0/0:27,0:27:81.28:0,81,1294	0/0:23,0:23:69.24:0,69,1103	0/0:5,0:5:15.05:0,15,234
chr10	72685040	.	TAC	T	328.54	PASS	AB=0.903;AC=13;AF=0.241;AN=54;BaseQRankSum=2.707;DP=625;FS=0.000;HRun=0;HaplotypeScore=112.0612;InbreedingCoeff=-0.1859;MQ=66.20;MQ0=11;MQRankSum=3.092;QD=1.37;ReadPosRankSum=1.390;VQSLOD=1.4125;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:38:11.66:0,12,62	1/1:3,2:5:6.02:67,6,0	./.	0/0:30,0:20:6.02:0,6,82	0/1:13,2:16:48.73:49,0,263	0/1:19,2:21:36.45:36,0,332	0/1:31,4:36:99:103,0,321	0/0:29,0:29:10.37:0,10,252	0/0:21,0:21:11.51:0,12,514	0/0:29,0:29:50.35:0,50,449	0/0:25,0:25:8.63:0,9,48	0/1:15,1:16:56.79:57,0,140	0/0:19,0:20:24.94:0,25,465	0/0:17,0:17:15.05:0,15,218	0/1:21,2:24:36.40:36,0,311	0/0:24,0:23:30.07:0,30,410	0/0:28,0:28:17.13:0,17,131	0/0:15,0:17:26.81:0,27,235	0/1:18,0:16:15.57:16,0,82	0/1:13,1:14:15.21:15,0,208	0/1:51,3:54:15.76:16,0,966	0/1:12,1:13:3.19:3,0,356	0/0:6,0:6:9.03:0,9,133	0/0:28,1:30:2.16:0,2,565	0/0:22,0:22:4.60:0,5,17	0/1:14,1:16:56.17:56,0,147	0/0:19,2:21:10.51:0,11,506	0/1:3,1:4:21.23:21,0,124
chr10	72685070	.	C	CACACAT	1716.05	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=7.248;DP=784;FS=0.000;HRun=0;HaplotypeScore=195.4576;InbreedingCoeff=0.8069;MQ=48.80;MQ0=32;MQRankSum=-8.668;QD=12.26;ReadPosRankSum=-1.304;VQSLOD=2.6327;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:32:48.97:59,0,49	0/0:7,0:7:20.98:0,21,215	0/0:66,0:12:18.11:0,18,172	0/0:80,0:20:40.51:0,41,354	0/0:19,0:19:47.64:0,48,696	0/0:19,0:19:42.05:0,42,736	0/0:32,0:32:69.59:0,70,1016	0/0:37,0:36:90.70:0,91,945	0/0:24,0:23:60.09:0,60,1020	1/1:25,5:31:23.29:997,23,0	1/1:14,5:22:9.02:158,9,0	0/0:23,0:22:18.02:0,18,549	0/0:26,0:26:59.81:0,60,881	0/0:18,0:18:38.98:0,39,491	0/0:17,0:17:44.80:0,45,677	0/0:24,0:24:53.75:0,54,847	1/1:23,12:34:54.63:559,55,0	0/0:19,0:18:17.09:0,17,207	0/0:22,0:18:38.77:0,39,398	0/0:15,0:15:36.02:0,36,532	0/0:74,0:73:99:0,174,2367	0/0:24,0:24:71.86:0,72,926	0/0:14,0:14:35.90:0,36,408	0/0:32,0:32:68.33:0,68,1083	1/1:16,1:18:5.50:97,5,0	0/0:21,0:21:31.19:0,31,695	0/0:26,0:25:68.64:0,69,1050	0/0:5,0:5:15.03:0,15,278
chr10	72685099	.	T	TAC	1693.57	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.448;DP=836;FS=1.734;HRun=0;HaplotypeScore=166.3587;InbreedingCoeff=0.9820;MQ=50.52;MQ0=23;MQRankSum=-9.958;QD=14.86;ReadPosRankSum=-2.316;VQSLOD=3.2409;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:28.99:0,29,380	0/0:14,0:14:36.06:0,36,430	0/0:85,0:21:35.39:0,35,371	0/0:95,0:24:30.01:0,30,352	0/0:27,0:27:72.20:0,72,891	0/0:20,0:20:36.04:0,36,432	0/0:31,0:32:72.20:0,72,894	0/0:37,0:37:74.81:0,75,981	0/0:21,0:21:54.13:0,54,661	1/1:13,15:28:57.07:858,57,0	1/1:10,10:20:17.52:74,18,0	0/0:18,0:19:40.67:0,41,565	0/0:23,0:23:60.18:0,60,747	0/0:18,0:18:48.15:0,48,616	0/0:20,0:20:54.16:0,54,681	0/0:26,0:26:69.22:0,69,886	1/1:4,23:26:39.60:637,40,0	1/1:12,5:16:15.67:205,16,0	0/0:25,0:23:51.16:0,51,656	0/0:21,0:21:45.35:0,45,645	0/0:67,0:67:99:0,117,1896	0/0:31,0:31:90.29:0,90,1156	0/0:19,0:19:45.10:0,45,547	0/0:30,0:29:67.33:0,67,853	1/1:4,18:22:13.61:91,14,0	0/0:26,0:26:58.76:0,59,731	0/0:25,0:24:60.11:0,60,746	0/0:4,0:4:12.04:0,12,154
chr10	72685117	.	T	TACACACACAC	3129.91	PASS	AB=0.991;AC=14;AF=0.250;AN=56;BaseQRankSum=6.873;DP=746;FS=13.190;HRun=0;HaplotypeScore=245.1960;InbreedingCoeff=0.5328;MQ=52.84;MQ0=17;MQRankSum=-8.732;QD=11.26;ReadPosRankSum=-3.088;VQSLOD=0.6980;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:35:59.30:59,0,566	0/0:14,0:14:38.92:0,39,1093	0/1:49,0:16:41:41,0,180	0/1:55,0:20:99:107,0,383	0/0:23,0:23:48.16:0,48,1472	0/0:19,0:19:32.94:0,33,926	0/0:29,0:29:57.15:0,57,1537	0/0:34,0:34:19.92:0,20,1860	0/0:22,0:22:54.18:0,54,1656	1/1:19,7:29:39.12:1530,39,0	1/1:4,13:20:0.47:1,0,0	0/1:18,0:18:11.53:12,0,956	0/0:18,0:19:36.12:0,36,987	0/0:19,0:19:51.16:0,51,1425	0/0:22,0:22:57.16:0,57,1611	0/0:23,0:23:57.19:0,57,1748	1/1:17,8:24:27.05:1160,27,0	1/1:5,0:15:21.76:120,22,0	0/0:21,0:21:33.11:0,33,902	0/0:19,0:19:48.16:0,48,1471	0/0:59,0:59:99:0,108,3204	0/0:36,0:38:75.24:0,75,2148	0/0:29,0:28:72.15:0,72,1877	0/0:28,0:29:57.19:0,57,1656	1/1:12,16:29:6.50:269,6,0	0/0:22,0:22:57.19:0,57,1748	0/0:23,0:23:54.18:0,54,1634	0/0:3,0:3:6.02:0,6,184
chr10	72685767	.	AT	A	3986.06	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.098;DP=610;FS=1.429;HRun=1;HaplotypeScore=58.3606;InbreedingCoeff=0.9932;MQ=72.27;MQ0=0;MQRankSum=-0.093;QD=39.86;ReadPosRankSum=-0.249;VQSLOD=3.9922;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1631	0/0:11,0:11:33.11:0,33,526	0/0:11,0:11:33.11:0,33,512	0/0:13,0:13:15.30:0,15,431	0/0:34,0:34:99:0,99,1583	0/0:20,0:20:60.20:0,60,959	0/0:21,0:21:63.21:0,63,1002	0/0:34,0:34:99:0,102,1631	0/0:17,0:17:51.17:0,51,815	1/1:0,25:25:75.25:1049,75,0	1/1:0,25:25:63.21:881,63,0	0/0:23,0:23:69.24:0,69,1101	0/0:14,0:14:42.14:0,42,672	0/0:13,0:13:39.13:0,39,624	0/0:22,0:22:66.23:0,66,1055	0/0:29,0:29:87.28:0,87,1368	1/1:0,37:37:99:1510,108,0	0/0:21,0:21:63.21:0,63,1006	0/0:36,0:36:99:0,108,1705	0/0:25,0:25:75.26:0,75,1199	0/0:30,0:30:87.30:0,87,1386	0/0:6,0:6:18.05:0,18,265	0/0:19,0:19:54.18:0,54,861	0/0:18,0:18:54.18:0,54,863	1/1:0,13:13:39.13:546,39,0	0/0:23,1:24:30.27:0,30,1061	0/0:23,0:23:69.24:0,69,1103	0/0:11,0:11:33.10:0,33,501
chr10	72686233	.	T	TG	246.99	PASS	AB=1.000;AC=5;AF=0.109;AN=46;BaseQRankSum=4.748;DP=105;FS=2.649;HRun=7;HaplotypeScore=21.9572;InbreedingCoeff=0.1671;MQ=73.68;MQ0=0;MQRankSum=-2.839;QD=7.72;ReadPosRankSum=0.729;VQSLOD=-0.6200;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,10:15:31.90:329,32,0	./.	0/0:5,0:5:3:0,3,29	0/1:5,0:5:0.68:1,0,32	./.	0/0:6,0:6:12:0,12,107	0/0:3,0:3:5.11:0,5,53	0/0:6,0:6:11.97:0,12,97	0/0:2,0:2:5.12:0,5,20	0/0:3,0:3:6.01:0,6,58	0/0:5,0:5:6:0,6,58	0/0:3,0:3:7.04:0,7,40	0/0:3,0:3:2.95:0,3,19	0/0:3,0:3:8.95:0,9,76	0/0:5,0:5:8.59:0,9,64	0/0:2,0:2:5.68:0,6,40	0/0:6,0:6:14.81:0,15,129	./.	0/1:4,0:4:0:0,0,0	./.	0/1:8,0:8:14.90:15,0,21	0/0:4,0:4:2.72:0,3,26	0/0:3,0:3:6.01:0,6,57	0/0:2,0:2:2.94:0,3,29	0/0:4,0:4:5.75:0,6,40	0/0:1,0:1:3:0,3,29	./.	0/0:2,0:2:5.88:0,6,35
chr10	72686236	.	G	GGAC	43.15	PASS	AB=0.636;AC=1;AF=0.022;AN=46;BaseQRankSum=1.387;DP=95;FS=7.241;HRun=0;HaplotypeScore=25.2498;InbreedingCoeff=-0.1094;MQ=65.87;MQ0=0;MQRankSum=-2.134;QD=6.16;ReadPosRankSum=-0.347;VQSLOD=0.1357;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:35.04:0,35,213	./.	0/0:4,0:4:3.01:0,3,53	0/0:4,0:4:6.91:0,7,105	./.	0/0:6,0:6:15.05:0,15,247	0/0:3,0:3:9.03:0,9,138	0/0:5,0:5:15.05:0,15,257	0/0:2,0:2:6.02:0,6,100	0/0:2,0:2:6.02:0,6,106	0/0:5,0:5:6.48:0,6,107	0/0:3,0:3:9.03:0,9,146	0/0:2,0:2:6.01:0,6,65	0/0:3,0:3:9.03:0,9,159	0/0:5,0:5:15.04:0,15,226	0/0:2,0:2:6.02:0,6,103	0/0:6,0:6:18.06:0,18,310	./.	0/0:3,0:3:6.02:0,6,93	./.	0/1:3,4:7:79.38:116,0,79	0/0:4,0:4:5.20:0,5,97	0/0:3,0:3:6.02:0,6,106	0/0:2,0:2:3.01:0,3,53	0/0:3,0:3:9.03:0,9,136	0/0:1,0:1:3.01:0,3,53	./.	0/0:2,0:2:6.02:0,6,104
chr10	72686480	.	G	GA	1869.56	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.785;DP=634;FS=12.980;HRun=0;HaplotypeScore=64.8591;InbreedingCoeff=0.9691;MQ=85.93;MQ0=0;MQRankSum=-2.468;QD=42.49;ReadPosRankSum=0.324;VQSLOD=3.0372;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:43:99:1964,123,0	0/0:4,0:4:12.04:0,12,168	0/0:25,0:25:72.23:0,72,975	0/0:21,0:21:63.21:0,63,865	0/0:17,0:16:45.15:0,45,626	0/0:23,0:23:66.22:0,66,922	0/0:30,0:30:90.17:0,90,1194	0/0:43,0:43:99:0,126,1745	0/0:28,0:28:69.23:0,69,963	0/0:14,0:14:36.11:0,36,487	0/0:13,0:13:39.13:0,39,545	0/0:19,0:19:54.15:0,54,735	0/0:16,0:16:42.12:0,42,568	0/0:26,0:26:75.15:0,75,1005	0/0:25,0:25:66:0,66,839	0/0:20,0:20:60.13:0,60,814	0/0:45,0:45:99:0,135,1884	0/0:18,0:18:54.16:0,54,735	0/0:30,0:30:87.25:0,87,1142	0/0:11,0:11:33.11:0,33,460	0/0:44,0:44:99:0,126,1722	0/0:16,0:16:42.14:0,42,587	0/0:11,0:11:30.08:0,30,417	0/0:26,0:26:78.26:0,78,1090	0/0:14,0:13:39.13:0,39,545	0/0:24,0:24:69.23:0,69,964	0/0:13,0:13:36.09:0,36,481	0/0:14,0:14:42.12:0,42,555
chr10	72688419	.	CT	C	1164.83	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.295;DP=707;FS=5.141;HRun=2;HaplotypeScore=68.0181;InbreedingCoeff=0.9994;MQ=89.45;MQ0=0;MQRankSum=-3.744;QD=31.48;ReadPosRankSum=-0.430;VQSLOD=3.0406;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:37:77.36:1260,77,0	0/0:10,0:10:30.10:0,30,449	0/0:30,0:30:63.55:0,64,1200	0/0:22,1:23:39.75:0,40,732	0/0:35,0:35:99:0,105,1534	0/0:32,0:32:96.31:0,96,1413	0/0:22,0:22:66.21:0,66,967	0/0:29,0:29:84.25:0,84,1173	0/0:26,0:26:78.26:0,78,1166	0/0:36,0:36:99:0,108,1572	0/0:21,0:21:60.19:0,60,876	0/0:19,0:19:57.19:0,57,837	0/0:26,0:26:78.25:0,78,1143	0/0:17,0:17:51.13:0,51,704	0/0:21,0:21:63.20:0,63,923	0/0:26,0:26:78.25:0,78,1147	0/0:28,0:28:81.27:0,81,1211	0/0:20,0:19:60.20:0,60,896	0/0:22,0:22:66.21:0,66,951	0/0:22,0:22:63.20:0,63,926	0/0:43,0:43:99:0,123,1799	0/0:26,0:26:78.26:0,78,1168	0/0:15,0:15:45.15:0,45,674	0/0:21,0:21:63.20:0,63,923	0/0:20,0:20:57.17:0,57,816	0/0:32,0:32:93.30:0,93,1356	0/0:32,0:32:96.31:0,96,1415	0/0:16,0:16:48.15:0,48,699
chr10	72689257	.	A	AAAACAAACAAACAAAAAC	701.44	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=2.144;DP=570;FS=0.000;HRun=0;HaplotypeScore=246.4359;InbreedingCoeff=0.5747;MQ=72.23;MQ0=3;MQRankSum=-2.792;QD=15.94;ReadPosRankSum=-1.306;VQSLOD=1.5840;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,2:22:9.03:767,9,0	0/0:14,0:14:42.13:0,42,1738	0/0:31,0:17:10.27:0,10,144	0/1:22,0:11:31.94:32,0,51	0/0:30,0:30:81.17:0,81,3525	0/0:20,0:20:51.16:0,51,2095	0/0:23,0:23:54.19:0,54,2559	0/0:29,0:29:57.17:0,57,2208	0/0:15,0:15:39.13:0,39,1739	0/0:20,0:20:54.19:0,54,2654	0/0:24,0:24:66.21:0,66,2924	0/0:15,0:15:45.15:0,45,1922	0/0:15,0:15:45.15:0,45,2086	0/0:20,0:20:57.16:0,57,2346	0/0:14,0:14:42.14:0,42,1959	0/0:16,0:16:42.13:0,42,1844	0/0:21,0:21:54.16:0,54,2392	0/0:11,0:11:33.08:0,33,1308	0/0:20,0:20:51.13:0,51,1658	0/0:24,0:24:66.22:0,66,2792	0/0:19,0:19:48.16:0,48,1898	0/0:20,0:20:48.12:0,48,1946	0/0:23,0:23:66.17:0,66,2714	0/0:12,0:12:30.09:0,30,1339	0/0:32,0:32:84.19:0,84,3728	0/0:20,0:20:57.17:0,57,2435	0/0:18,0:17:42.11:0,42,1721	0/0:20,0:20:57.20:0,57,2823
chr10	72689804	.	GA	G	607.89	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.329;DP=650;FS=3.284;HRun=10;HaplotypeScore=71.1742;InbreedingCoeff=0.8914;MQ=73.22;MQ0=3;MQRankSum=0.719;QD=17.88;ReadPosRankSum=2.610;VQSLOD=4.4849;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:34:80.97:703,81,0	0/0:6,0:6:15.04:0,15,166	0/0:32,0:22:37.32:0,37,290	0/0:20,0:14:8.18:0,8,116	0/0:26,0:26:63.17:0,63,695	0/0:22,0:23:59.98:0,60,635	0/0:27,0:27:68.92:0,69,742	0/0:23,0:22:63.17:0,63,694	0/0:18,0:18:45.11:0,45,488	0/0:19,0:19:51.14:0,51,564	0/0:12,0:12:30.08:0,30,332	0/0:25,0:25:63.17:0,63,697	0/0:31,0:31:90.23:0,90,987	0/0:23,0:23:63.17:0,63,696	0/0:32,0:32:58.52:0,59,870	0/0:21,0:21:60.14:0,60,654	0/0:23,0:23:66.12:0,66,700	0/0:36,1:37:73.18:0,73,1016	0/0:27,1:26:37.04:0,37,619	0/0:28,0:28:75.64:0,76,813	0/0:13,0:13:39.11:0,39,431	0/0:22,0:22:57.15:0,57,629	0/0:18,1:19:25.08:0,25,504	0/0:31,0:31:84.20:0,84,910	0/0:19,0:19:44.95:0,45,479	0/0:24,0:25:71.98:0,72,769	0/0:28,0:28:75.20:0,75,826	0/0:5,0:5:11.52:0,12,108
chr10	72690293	.	C	CT	947.91	PASS	AB=0.917;AC=15;AF=0.268;AN=56;BaseQRankSum=4.700;DP=432;FS=1.663;HRun=9;HaplotypeScore=53.4927;InbreedingCoeff=0.7241;MQ=77.07;MQ0=0;MQRankSum=1.531;QD=8.10;ReadPosRankSum=2.348;VQSLOD=1.1171;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:47.31:0,47,380	0/0:5,0:5:12:0,12,104	0/0:10,0:9:11.66:0,12,81	0/0:14,0:10:2.08:0,2,35	0/0:22,0:22:59.96:0,60,515	0/0:13,0:13:29.97:0,30,258	0/0:10,0:10:20.97:0,21,178	0/0:35,0:35:77.96:0,78,675	0/0:12,0:12:20.96:0,21,177	0/1:21,0:21:7.12:86,0,7	0/1:13,0:13:1.65:42,0,2	1/1:3,7:11:21:218,21,0	1/1:4,7:11:18.05:199,18,0	0/0:10,0:10:11.98:0,12,102	0/0:13,0:13:35.95:0,36,302	0/0:13,0:13:26.97:0,27,229	1/1:25,0:25:39.23:150,39,0	0/0:30,0:30:80.88:0,81,682	0/0:23,0:23:53.43:0,53,439	0/0:25,0:25:50.87:0,51,424	0/0:8,0:8:14.98:0,15,128	1/1:1,7:8:17.97:183,18,0	1/1:3,5:8:11.95:116,12,0	0/1:4,2:6:17.02:57,0,17	1/1:14,0:14:14.37:85,14,0	0/0:15,0:15:32.98:0,33,284	0/0:20,0:20:44.93:0,45,383	0/0:18,0:17:50.99:0,51,443
chr10	72690302	.	T	TA	1826.72	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=-2.398;DP=391;FS=4.571;HRun=7;HaplotypeScore=42.8885;InbreedingCoeff=0.6049;MQ=71.01;MQ0=0;MQRankSum=1.862;QD=17.23;ReadPosRankSum=1.803;VQSLOD=3.1582;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:8.37:0,8,29	0/0:6,0:6:18.01:0,18,166	0/0:12,0:7:11.72:0,12,84	0/0:9,0:5:1.88:0,2,25	0/0:22,0:22:63.08:0,63,596	0/0:14,0:14:36:0,36,328	0/0:11,0:11:26.99:0,27,244	0/0:36,0:36:99:0,102,943	0/0:7,0:7:21.03:0,21,202	1/1:2,18:20:54.07:588,54,0	1/1:5,7:12:33.02:353,33,0	0/1:9,0:9:8.56:21,0,9	1/1:7,0:7:13.37:44,13,0	0/0:4,0:4:9.01:0,9,86	0/0:12,0:12:27.04:0,27,260	0/0:10,0:10:24.02:0,24,226	1/1:3,21:24:45.14:534,45,0	0/0:31,0:31:75.06:0,75,707	0/0:21,0:21:48:0,48,449	0/0:17,0:17:39.05:0,39,374	0/0:8,0:8:15.01:0,15,138	0/1:8,0:8:9.08:24,0,9	0/1:6,0:6:10.96:11,0,13	0/1:4,0:4:7.40:7,0,43	1/1:3,13:16:36.11:425,36,0	0/0:13,0:13:36.04:0,36,338	0/0:15,0:15:42.05:0,42,399	0/0:18,0:17:51.08:0,51,491
chr10	72691508	.	CGTGTGTGTGT	C	1444.66	PASS	AB=0.838;AC=6;AF=0.111;AN=54;BaseQRankSum=4.847;DP=1033;FS=6.343;HRun=0;HaplotypeScore=296.9296;InbreedingCoeff=0.3798;MQ=50.88;MQ0=23;MQRankSum=-1.706;QD=11.56;ReadPosRankSum=-1.666;VQSLOD=1.5281;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:52:25.14:0,25,389	0/0:13,0:13:27.09:0,27,865	./.	0/0:41,0:15:2.98:0,3,21	0/0:15,0:15:27.09:0,27,860	0/0:26,0:24:15.44:0,15,251	0/0:40,0:40:31.60:0,32,778	0/0:52,0:46:36.07:0,36,540	0/0:34,0:34:51.17:0,51,1597	1/1:24,13:39:0.58:842,1,0	1/1:10,7:18:2.59:33,3,0	0/0:43,0:48:73.11:0,73,2423	0/0:49,0:51:93.10:0,93,2950	0/0:38,0:38:51.11:0,51,1696	0/0:36,0:38:66.69:0,67,1995	0/0:32,0:34:57.67:0,58,1666	0/1:22,13:36:27.45:253,0,27	0/1:30,1:32:51.92:427,0,52	0/0:25,0:17:21.07:0,21,553	0/0:17,0:16:24.08:0,24,701	0/0:131,0:127:99:0,146,4581	0/0:36,0:36:60.18:0,60,1889	0/0:16,0:17:21.07:0,21,556	0/0:49,0:50:83.26:0,83,2604	0/0:12,7:20:0.47:0,0,1	0/0:35,0:36:69.23:0,69,2015	0/0:33,0:34:51.65:0,52,1664	0/0:22,0:22:39.07:0,39,984
chr10	72693193	.	GCACACGCGCGCGCGTGCGCGCGCGCGCACACACA	G	1140.40	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.735;DP=383;FS=10.741;HRun=0;HaplotypeScore=284.6933;InbreedingCoeff=0.6576;MQ=74.25;MQ0=2;MQRankSum=-2.790;QD=38.01;ReadPosRankSum=-0.303;VQSLOD=0.4515;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,14:24:17.89:1230,18,0	0/0:9,0:9:21.05:0,21,1580	1/1:6,0:5:0.89:2,1,0	0/0:17,0:11:11.36:0,11,172	0/0:11,0:11:33.11:0,33,3127	0/0:17,0:17:48.16:0,48,5666	0/0:33,0:33:87.19:0,87,8022	0/0:14,0:14:27:0,27,927	0/0:9,0:9:24.05:0,24,1650	0/0:17,0:17:45.15:0,45,3025	0/0:8,0:8:18.53:0,19,485	0/0:6,0:6:15.04:0,15,291	0/0:8,0:8:12.02:0,12,1027	0/0:12,0:12:36.11:0,36,2970	0/0:3,0:3:6.02:0,6,493	0/0:7,0:7:6.02:0,6,712	0/0:22,0:22:20.36:0,20,551	0/0:22,0:22:63.15:0,63,6357	0/0:16,0:16:45.13:0,45,2670	0/0:9,0:9:17.84:0,18,1696	0/0:33,0:33:87.30:0,87,9537	0/0:16,0:16:36.12:0,36,3198	0/0:10,0:10:27.09:0,27,2774	0/0:23,0:23:63.16:0,63,5695	0/0:12,0:12:9.92:0,10,560	0/0:8,0:8:21.07:0,21,2320	0/0:3,0:3:6.02:0,6,781	0/0:8,0:8:14.72:0,15,684
chr10	72693206	.	CGT	C	608.83	PASS	AB=0.933;AC=13;AF=0.232;AN=56;BaseQRankSum=6.192;DP=351;FS=23.372;HRun=0;HaplotypeScore=61.1677;InbreedingCoeff=0.7162;MQ=71.24;MQ0=6;MQRankSum=-1.934;QD=7.25;ReadPosRankSum=0.585;VQSLOD=1.3269;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:14.20:70,14,0	0/0:6,0:6:15:0,15,172	1/1:5,0:4:0.47:1,0,0	0/1:13,0:8:5.98:17,0,6	0/0:11,0:11:33.06:0,33,441	0/0:19,0:19:37.69:0,38,751	0/0:35,0:35:83.78:0,84,1201	0/0:9,0:8:12.02:0,12,129	0/0:7,0:7:21.05:0,21,294	1/1:13,6:18:44.13:483,44,0	1/1:3,1:4:5.97:46,6,0	0/0:7,0:7:13.23:0,13,78	0/0:5,0:5:14.98:0,15,165	0/0:13,0:13:32.38:0,32,380	0/0:4,0:4:2.98:0,3,55	0/0:7,0:7:8.99:0,9,92	1/1:2,15:16:3.01:42,3,0	0/0:20,0:20:54.07:0,54,750	0/0:11,0:11:29.83:0,30,316	0/0:9,1:10:17.25:0,17,222	0/0:37,0:36:88.30:0,88,1211	0/0:15,0:15:30.06:0,30,411	0/0:13,0:13:36.03:0,36,424	0/0:21,0:21:56.90:0,57,847	1/1:4,7:11:9:107,9,0	0/0:11,0:11:32.95:0,33,365	0/0:4,0:4:9:0,9,106	0/0:2,0:2:6.02:0,6,88
chr10	72694720	.	CTG	C	1101	PASS	AB=0.904;AC=5;AF=0.089;AN=56;BaseQRankSum=6.801;DP=783;FS=10.843;HRun=0;HaplotypeScore=128.3049;InbreedingCoeff=0.3247;MQ=61.68;MQ0=5;MQRankSum=-1.499;QD=8.67;ReadPosRankSum=1.957;VQSLOD=3.0218;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,45:55:98.51:1158,99,0	0/0:10,0:10:27.09:0,27,424	0/0:33,1:21:44.51:0,45,651	0/0:33,0:23:34.28:0,34,409	0/0:26,1:27:27.22:0,27,899	0/0:20,0:20:48.15:0,48,739	0/1:23,3:26:20.82:21,0,623	0/0:39,0:39:93.30:0,93,1445	0/0:29,2:31:45.27:0,45,1186	0/0:19,0:40:86.37:0,86,787	0/0:16,0:27:38.68:0,39,428	0/0:15,0:15:27.07:0,27,397	0/0:30,1:31:27.21:0,27,867	0/0:19,0:19:51.17:0,51,807	0/0:31,2:33:39.26:0,39,1087	0/1:31,4:35:29.67:30,0,1026	0/0:16,0:29:32.67:0,33,362	0/0:26,0:26:57.18:0,57,874	0/0:20,0:19:21.06:0,21,315	0/0:29,0:29:66.22:0,66,1048	0/0:37,1:38:57.78:0,58,1337	0/0:24,0:24:49.16:0,49,854	0/0:20,0:21:27.48:0,27,704	0/0:26,2:29:6.32:0,6,1029	0/0:7,0:17:33.12:0,33,398	0/0:28,1:29:39.34:0,39,1111	0/0:35,0:35:87.29:0,87,1367	0/1:10,1:11:14.85:15,0,263
chr10	72694750	.	T	TTGTC	9557.50	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=3.033;DP=823;FS=12.752;HRun=0;HaplotypeScore=149.5345;InbreedingCoeff=0.9785;MQ=63.73;MQ0=6;MQRankSum=-8.426;QD=46.17;ReadPosRankSum=-0.287;VQSLOD=4.7897;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:43,14:57:99:2270,101,0	0/0:14,0:14:36.11:0,36,576	0/0:55,0:38:69.12:0,69,1053	0/0:44,0:34:6.12:0,6,830	0/0:29,0:29:66.23:0,66,1108	0/0:23,0:23:51.17:0,51,870	0/0:22,0:22:54.17:0,54,890	0/0:41,0:41:66.23:0,66,1107	0/0:35,0:35:96.30:0,96,1556	1/1:15,28:44:99:2331,102,0	1/1:6,21:27:59.87:1361,60,0	0/0:15,0:15:42.14:0,42,716	0/0:25,0:25:48.16:0,48,811	0/0:20,0:20:39.12:0,39,638	0/0:31,0:31:87.28:0,87,1452	0/0:31,0:31:81.28:0,81,1370	1/1:11,19:32:42.14:1005,42,0	1/1:4,23:27:57.20:1428,57,0	0/0:21,0:21:57.09:0,57,859	0/0:24,0:24:66.14:0,66,1067	0/0:45,0:45:99:0,114,1885	0/0:20,0:20:51.17:0,51,867	0/0:23,0:23:54.18:0,54,913	0/0:31,0:31:78.22:0,78,1281	1/1:2,18:20:48.16:1161,48,0	0/0:26,0:26:75.25:0,75,1253	0/0:29,0:29:84.29:0,84,1416	0/0:10,0:10:21.02:0,21,316
chr10	72695892	.	CCT	C	460.38	PASS	AB=1.000;AC=24;AF=0.480;AN=50;BaseQRankSum=-0.295;DP=494;FS=5.066;HRun=0;HaplotypeScore=68.9045;InbreedingCoeff=0.5156;MQ=65.77;MQ0=14;MQRankSum=0.484;QD=2.30;ReadPosRankSum=1.898;VQSLOD=1.2293;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:3.01:0,3,40	1/1:5,1:4:2.84:14,3,0	./.	0/0:31,0:15:0.83:0,1,2	1/1:10,2:12:3.01:32,3,0	0/1:15,0:15:0:0,0,0	1/1:12,3:16:11.47:111,11,0	./.	1/1:10,2:11:6.02:65,6,0	0/0:22,0:22:9.91:0,10,117	0/0:12,0:12:5.46:0,5,30	0/0:26,0:26:11.43:0,11,72	0/0:18,0:18:13.20:0,13,123	1/1:17,5:23:11.60:111,12,0	1/1:15,4:19:11.86:111,12,0	1/1:10,0:13:2.84:14,3,0	0/0:28,0:28:34.08:0,34,283	0/0:15,0:16:0.90:0,1,157	1/1:15,1:16:3.01:32,3,0	./.	0/1:23,0:21:27.86:28,0,33	0/0:12,0:12:5.75:0,6,53	0/0:13,0:13:3.45:0,3,24	0/0:23,0:22:14.34:0,14,103	0/0:21,0:20:18:0,18,197	1/1:16,0:16:3.01:32,3,0	1/1:10,0:10:2.91:21,3,0	1/1:16,1:17:5.84:46,6,0
chr10	72696747	.	AGTCACC	A	2352.33	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.407;DP=760;FS=2.968;HRun=0;HaplotypeScore=160.2200;InbreedingCoeff=0.9983;MQ=89.09;MQ0=0;MQRankSum=-10.196;QD=44.38;ReadPosRankSum=2.952;VQSLOD=3.7051;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,144,4796	0/0:11,0:11:30.10:0,30,1005	0/0:31,0:31:66.23:0,66,2027	0/0:30,0:30:66.23:0,66,1967	0/0:20,0:20:51.18:0,51,1686	0/0:24,0:24:66.23:0,66,2110	0/0:41,0:41:99:0,108,3586	0/0:27,0:27:72.24:0,72,2148	0/0:28,0:28:81.28:0,81,2724	0/0:16,0:16:45.15:0,45,1513	0/0:16,0:16:42.14:0,42,1392	0/0:33,0:33:87.30:0,87,2895	0/0:41,0:41:96.31:0,96,3047	0/0:30,0:30:84.29:0,84,2802	1/1:7,23:30:57.20:1237,57,0	1/1:2,21:23:57.20:1237,57,0	0/0:41,0:41:99:0,102,3430	0/0:20,0:19:54.19:0,54,1809	0/0:28,0:28:66.18:0,66,2002	0/0:14,0:14:36.12:0,36,1206	0/0:60,0:59:99:0,147,4599	0/0:20,0:20:48.16:0,48,1608	0/0:12,0:12:33.11:0,33,1045	0/0:43,0:43:99:0,108,3634	0/0:22,0:22:57.17:0,57,1770	0/0:23,0:23:57.20:0,57,1892	0/0:13,0:13:33.11:0,33,1092	0/0:10,0:10:24.08:0,24,809
chr10	72697087	.	GC	G	1307.29	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.077;DP=598;FS=9.109;HRun=2;HaplotypeScore=59.3147;InbreedingCoeff=0.9912;MQ=77.88;MQ0=0;MQRankSum=-4.176;QD=33.52;ReadPosRankSum=1.061;VQSLOD=3.2268;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:39:99:1402,108,0	0/0:8,0:8:24.08:0,24,357	0/0:15,0:15:36.11:0,36,497	0/0:17,0:17:31.80:0,32,546	0/0:25,0:25:72.23:0,72,1058	0/0:21,0:21:63.21:0,63,942	0/0:20,0:20:60.14:0,60,872	0/0:35,0:35:99:0,102,1474	0/0:23,0:23:69.23:0,69,1034	0/0:27,0:27:81.27:0,81,1194	0/0:13,0:13:39.12:0,39,564	0/0:35,0:35:99:0,105,1508	0/0:14,0:14:42.14:0,42,628	0/0:15,0:15:45.12:0,45,649	0/0:26,0:26:75.25:0,75,1123	0/0:12,0:12:36.10:0,36,519	0/0:35,0:35:99:0,105,1574	0/0:20,0:20:60.20:0,60,897	0/0:16,0:16:48.16:0,48,719	0/0:10,0:10:27.09:0,27,405	0/0:62,0:62:99:0,180,2596	0/0:12,0:12:36.10:0,36,517	0/0:11,0:11:30.10:0,30,447	0/0:31,0:31:93.31:0,93,1385	0/0:10,0:10:30.10:0,30,449	0/0:16,0:16:48.16:0,48,719	0/0:21,0:21:63.20:0,63,922	0/0:9,0:9:21.07:0,21,315
chr10	72697416	.	TA	T	2256.78	PASS	AB=0.973;AC=16;AF=0.286;AN=56;BaseQRankSum=2.546;DP=524;FS=1.407;HRun=1;HaplotypeScore=67.0842;InbreedingCoeff=0.6857;MQ=76.45;MQ0=3;MQRankSum=1.386;QD=13.04;ReadPosRankSum=-4.365;VQSLOD=0.8335;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:23.54:0,24,319	0/0:13,0:13:39.04:0,39,426	0/0:23,1:19:30.64:0,31,473	0/0:31,0:21:16.31:0,16,294	0/0:26,0:26:75.06:0,75,857	0/0:17,0:17:47.84:0,48,581	0/0:14,0:14:42.07:0,42,542	0/0:36,0:36:99:0,102,1219	0/0:14,0:14:42.11:0,42,539	1/1:17,0:17:17.19:197,17,0	0/1:18,1:19:3.64:124,0,4	1/1:0,12:12:15.05:209,15,0	1/1:0,8:8:21.07:292,21,0	0/0:18,0:18:51.14:0,51,649	0/0:15,0:15:45.12:0,45,574	0/0:11,0:11:33.11:0,33,447	0/1:36,1:36:17.25:219,0,17	0/1:29,1:30:21.07:205,0,21	0/0:22,0:22:60.37:0,60,741	0/0:25,0:25:75.16:0,75,918	0/0:21,0:21:63.20:0,63,843	1/1:1,14:15:39.78:515,40,0	1/1:0,11:11:18.06:251,18,0	1/1:1,13:14:30.07:397,30,0	0/1:10,0:10:7.78:42,0,8	0/0:22,0:22:34.12:0,34,720	0/0:8,0:8:24.08:0,24,323	0/0:6,0:6:18.06:0,18,245
chr10	72697417	.	A	ATT	827.96	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=0.547;DP=526;FS=1.351;HRun=8;HaplotypeScore=82.4952;InbreedingCoeff=0.3217;MQ=76.35;MQ0=4;MQRankSum=0.691;QD=8.90;ReadPosRankSum=-2.846;VQSLOD=-0.2636;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,22:29:58.08:894,58,0	0/0:13,0:13:27.04:0,27,283	0/0:25,0:19:32.53:0,33,409	0/0:31,0:21:23.14:0,23,277	0/0:25,0:25:51.11:0,51,568	0/0:17,0:17:42.01:0,42,441	0/0:14,0:14:36.08:0,36,401	0/0:36,0:36:75.15:0,75,818	0/0:14,0:14:36.07:0,36,391	0/0:17,0:17:6.48:0,6,101	0/0:19,0:19:37.99:0,38,215	0/0:13,0:13:12.47:0,12,46	0/0:9,0:9:7.01:0,7,42	0/0:19,0:19:48.10:0,48,521	0/0:14,0:14:39.11:0,39,435	0/0:12,0:12:33.08:0,33,368	0/1:38,0:37:29.27:29,0,359	0/0:26,0:26:57.67:0,58,377	0/0:21,0:22:44.60:0,45,451	0/0:24,0:24:60.14:0,60,660	0/0:21,0:21:63.15:0,63,690	0/1:15,0:15:17.93:18,0,58	0/1:11,0:11:5.05:5,0,22	0/0:14,0:14:14.49:0,14,69	0/0:10,0:10:23.46:0,23,141	0/0:22,0:22:47.80:0,48,527	0/0:9,0:9:24.06:0,24,267	0/0:6,0:6:18.05:0,18,201
chr10	72697976	.	T	TTGTG	1061.57	PASS	AB=0.736;AC=18;AF=0.346;AN=52;BaseQRankSum=5.378;DP=529;FS=6.678;HRun=0;HaplotypeScore=118.2266;InbreedingCoeff=0.6660;MQ=55.33;MQ0=12;MQRankSum=-5.122;QD=5.44;ReadPosRankSum=-1.317;VQSLOD=1.8731;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:9:0,9,84	0/0:8,0:8:10.85:0,11,134	./.	./.	0/0:13,0:18:20.94:0,21,251	0/0:21,0:20:30.10:0,30,428	0/0:12,0:12:14.91:0,15,205	0/0:24,0:22:8.99:0,9,83	0/0:16,0:16:11.90:0,12,123	1/1:23,0:22:5.23:274,5,0	1/1:18,2:21:12.02:160,12,0	1/1:5,0:12:3.01:61,3,0	1/1:7,0:14:15.05:246,15,0	0/0:21,0:24:21.04:0,21,258	0/0:14,0:14:14.94:0,15,208	0/0:7,0:10:18.01:0,18,197	1/1:12,7:21:0.36:25,0,0	1/1:16,0:22:24.90:227,25,0	0/0:20,0:18:6.49:0,6,94	0/0:19,0:19:12.46:0,12,137	0/0:26,0:30:27.03:0,27,315	1/1:12,0:12:5.93:64,6,0	1/1:12,0:17:2.98:33,3,0	0/1:21,0:28:13.35:140,0,13	0/1:11,8:19:0:0,0,0	0/0:18,0:17:12.56:0,13,159	0/0:19,0:18:14.09:0,14,214	0/0:12,0:12:9.42:0,9,112
chr10	72698137	.	TTTTTTC	T	876.94	PASS	AB=0.854;AC=8;AF=0.143;AN=56;BaseQRankSum=0.497;DP=454;FS=6.743;HRun=0;HaplotypeScore=103.4782;InbreedingCoeff=0.6037;MQ=56.51;MQ0=19;MQRankSum=-3.173;QD=12.01;ReadPosRankSum=-0.708;VQSLOD=1.6625;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:29.83:0,30,301	0/1:4,0:4:4.61:5,0,85	0/0:46,0:12:15.50:0,16,164	0/0:46,0:14:6.18:0,6,101	0/0:17,0:17:44.86:0,45,768	0/0:9,0:9:3.66:0,4,302	0/0:10,0:10:21.05:0,21,484	0/0:21,0:21:32.66:0,33,715	0/0:9,0:9:14.07:0,14,277	1/1:17,2:18:27.36:329,27,0	1/1:8,0:8:5.12:46,5,0	0/0:17,0:17:33.64:0,34,309	0/0:13,0:12:28.97:0,29,241	0/0:7,0:7:15.92:0,16,343	0/0:5,0:5:15.01:0,15,239	0/0:9,0:9:21:0,21,361	1/1:23,2:24:45.77:470,46,0	0/0:20,0:19:20.61:0,21,529	0/0:18,0:17:35.18:0,35,553	0/0:13,0:13:33.83:0,34,562	0/0:12,0:11:24.01:0,24,495	0/0:11,0:11:23.49:0,23,286	0/0:10,0:9:13.53:0,14,122	0/0:17,0:15:30.81:0,31,297	0/1:10,7:16:11.33:170,0,11	0/0:12,0:10:5.45:0,5,241	0/0:14,0:14:14.35:0,14,389	0/0:18,0:18:39.13:0,39,936
chr10	72698160	.	T	TC	780.47	PASS	AB=0.736;AC=9;AF=0.161;AN=56;BaseQRankSum=-0.960;DP=400;FS=5.127;HRun=6;HaplotypeScore=62.5385;InbreedingCoeff=0.5502;MQ=50.68;MQ0=23;MQRankSum=-2.613;QD=8.77;ReadPosRankSum=1.842;VQSLOD=0.4618;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:48.07:0,48,472	0/0:3,0:3:5.93:0,6,40	0/0:36,0:6:8.92:0,9,71	0/1:35,0:6:3.17:3,0,25	0/0:16,0:16:23.99:0,24,232	0/0:11,0:11:17.94:0,18,160	0/0:9,0:8:17.76:0,18,157	0/0:22,0:22:35.86:0,36,336	0/0:7,0:7:6.01:0,6,61	0/0:11,0:11:30.06:0,30,300	0/0:7,0:7:11.95:0,12,99	0/1:6,6:12:18.15:100,0,18	1/1:4,9:12:24.07:285,24,0	0/0:8,0:8:20.86:0,21,181	0/0:8,0:8:14.99:0,15,142	0/0:10,0:10:20.68:0,21,184	0/0:29,0:27:53.87:0,54,516	0/0:23,0:22:41.84:0,42,373	0/0:16,0:14:8.90:0,9,147	0/0:8,0:8:20.97:0,21,192	0/0:15,0:14:25.99:0,26,240	1/1:6,6:12:20.98:240,21,0	1/1:3,1:3:6.01:63,6,0	0/1:2,11:12:6.11:237,0,6	0/0:17,0:16:12.02:0,12,121	0/0:7,0:7:14.99:0,15,142	0/0:10,0:10:18.03:0,18,183	0/0:14,0:14:24.05:0,24,244
chr10	72698258	.	TTTG	T	4126.27	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=11.951;DP=396;FS=3.340;HRun=0;HaplotypeScore=59.7911;InbreedingCoeff=0.9436;MQ=61.30;MQ0=0;MQRankSum=-5.729;QD=27.15;ReadPosRankSum=1.710;VQSLOD=3.2662;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,12:13:27.02:349,27,0	0/0:6,0:6:15.05:0,15,271	0/0:27,0:22:41.53:0,42,745	0/0:13,0:11:11.39:0,11,189	0/0:21,0:21:51.15:0,51,970	0/0:12,0:12:33.10:0,33,627	0/0:19,0:19:51.16:0,51,963	0/0:29,0:29:60.19:0,60,1112	0/0:7,0:7:15.05:0,15,295	1/1:2,12:14:33.11:479,33,0	1/1:1,11:12:30.02:389,30,0	1/1:2,9:11:33.10:464,33,0	1/1:2,6:8:21.06:287,21,0	0/0:12,0:12:36.12:0,36,737	0/0:8,0:8:21.04:0,21,356	0/0:11,0:11:30.10:0,30,613	1/1:2,29:31:63.21:916,63,0	1/1:5,0:10:5.95:42,6,0	0/0:12,0:12:21.07:0,21,405	0/0:13,0:13:36.12:0,36,708	0/0:6,0:6:9.03:0,9,184	1/1:2,4:6:15.04:202,15,0	1/1:3,9:12:29.60:305,30,0	1/1:3,7:9:8.98:106,9,0	1/1:0,22:22:42.10:587,42,0	0/0:19,1:20:7.98:0,8,869	0/0:16,0:16:45.15:0,45,914	0/0:11,0:11:30.10:0,30,613
chr10	72698284	.	A	AT	1313.99	PASS	AB=0.952;AC=13;AF=0.232;AN=56;BaseQRankSum=3.261;DP=479;FS=1.161;HRun=10;HaplotypeScore=68.4222;InbreedingCoeff=0.6672;MQ=67.35;MQ0=0;MQRankSum=-6.021;QD=11.53;ReadPosRankSum=-2.421;VQSLOD=2.7094;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:21:26.48:0,26,77	0/1:9,1:10:2.03:2,0,190	0/0:29,0:16:7.44:0,7,70	0/1:18,0:13:21.14:21,0,64	0/0:20,0:20:47.93:0,48,394	0/0:15,0:15:35.95:0,36,296	0/0:17,1:18:16.19:0,16,332	0/0:30,0:30:59.89:0,60,490	0/0:11,0:11:23.96:0,24,197	0/0:18,0:18:44.92:0,45,369	0/0:15,0:15:35.95:0,36,295	1/1:2,15:17:45.11:479,45,0	1/1:3,10:13:27.06:280,27,0	0/0:17,0:17:44.93:0,45,369	0/0:11,0:11:0.86:0,1,192	0/0:17,0:17:41.94:0,42,345	0/0:36,0:36:71.88:0,72,591	0/0:8,0:7:8.21:0,8,56	0/0:16,1:17:9:0,9,250	0/1:17,1:18:7.96:8,0,315	0/0:9,0:9:21.83:0,22,171	1/1:0,9:9:21.05:224,21,0	1/1:6,11:18:29.90:296,30,0	1/1:1,10:10:18:179,18,0	0/0:26,0:26:44.93:0,45,369	0/0:17,0:17:50.94:0,51,419	0/0:19,0:20:46.96:0,47,375	0/0:10,0:10:29.96:0,30,246
chr10	72699007	.	G	GT	1756.79	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-9.546;DP=567;FS=8.127;HRun=2;HaplotypeScore=53.6753;InbreedingCoeff=0.9099;MQ=77.03;MQ0=0;MQRankSum=-3.841;QD=36.60;ReadPosRankSum=1.724;VQSLOD=4.0101;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,45:48:99:1852,129,0	0/0:3,0:3:9.01:0,9,98	0/0:10,0:10:30.08:0,30,352	0/0:19,0:17:44.29:0,44,474	0/0:15,0:15:42.12:0,42,506	0/0:20,0:20:60.19:0,60,743	0/0:19,0:19:54.15:0,54,645	0/0:18,0:18:48.13:0,48,572	0/0:24,0:24:66.21:0,66,818	0/0:16,0:16:45.13:0,45,545	0/0:9,0:9:24.03:0,24,280	0/0:27,0:27:81.24:0,81,991	0/0:20,0:20:60.19:0,60,742	0/0:27,0:27:75.20:0,75,901	0/0:12,0:12:36.09:0,36,422	0/0:18,0:18:51.16:0,51,632	0/0:39,0:39:99:0,114,1382	0/0:22,0:22:63.14:0,63,750	0/0:22,0:22:62.16:0,62,719	0/0:5,0:5:12.04:0,12,149	0/0:51,0:51:99:0,150,1845	0/0:8,0:8:24.08:0,24,297	0/0:7,0:7:21.05:0,21,248	0/0:33,0:33:99:0,99,1209	0/0:13,0:13:39.12:0,39,482	0/0:24,0:24:69.20:0,69,833	0/0:29,0:28:84.26:0,84,1041	0/0:9,0:9:27.08:0,27,327
chr10	72700965	.	A	AT	411.35	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.000;DP=709;FS=1.872;HRun=9;HaplotypeScore=66.5209;InbreedingCoeff=0.9945;MQ=76.45;MQ0=0;MQRankSum=-2.679;QD=17.88;ReadPosRankSum=-0.261;VQSLOD=3.7423;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,117,1010	0/0:11,0:11:29.99:0,30,260	0/0:16,0:16:29.98:0,30,260	0/0:13,0:13:29.98:0,30,257	0/0:38,0:38:98.94:0,99,859	0/0:19,0:20:44.01:0,44,371	0/0:25,0:25:44.88:0,45,526	0/0:30,1:33:38.65:0,39,527	0/0:26,0:26:65.98:0,66,573	0/0:25,0:25:65.97:0,66,571	0/0:20,0:20:53.97:0,54,469	0/0:24,0:24:65.96:0,66,570	0/0:15,0:15:35.97:0,36,309	0/0:28,0:29:76.97:0,77,650	0/0:23,0:23:56.99:0,57,495	0/0:25,0:25:59.98:0,60,521	0/0:36,2:38:56.77:0,57,722	1/1:4,19:23:25.08:505,25,0	0/0:24,0:24:65.98:0,66,573	0/0:27,0:27:59.96:0,60,521	0/0:38,0:40:99:0,112,949	0/0:21,0:21:47.97:0,48,414	0/0:18,0:18:44.94:0,45,383	0/0:27,0:27:68.97:0,69,595	0/0:26,0:26:59.95:0,60,520	0/0:32,0:32:86.97:0,87,755	0/0:37,0:37:99:0,111,963	0/0:8,0:8:24:0,24,208
chr10	72701489	.	C	CGG	2097.94	PASS	AB=0.857;AC=9;AF=0.161;AN=56;BaseQRankSum=3.555;DP=515;FS=7.346;HRun=0;HaplotypeScore=76.6977;InbreedingCoeff=0.6499;MQ=62.20;MQ0=27;MQRankSum=0.458;QD=25.58;ReadPosRankSum=-0.192;VQSLOD=4.3424;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:19:47.87:0,48,715	0/1:4,0:4:11.55:12,0,80	0/0:20,0:14:39.08:0,39,568	0/0:31,0:25:66.01:0,66,951	0/0:18,0:17:42.11:0,42,585	0/1:18,0:17:10.75:11,0,427	0/0:31,0:31:73.13:0,73,1097	0/0:17,0:16:37.45:0,37,527	0/0:13,0:11:24.07:0,24,341	0/0:19,0:17:43.47:0,43,637	0/0:7,0:7:11.75:0,12,183	1/1:16,0:16:48.06:676,48,0	1/1:9,0:9:17.53:277,18,0	0/0:19,0:16:35.89:0,36,494	0/0:17,0:16:48.15:0,48,675	0/0:18,0:18:44.44:0,44,609	0/0:35,0:34:76.35:0,76,1036	0/0:24,0:21:55.09:0,55,777	0/0:17,0:16:45.05:0,45,595	0/0:11,0:10:16.14:0,16,268	0/0:47,0:46:62.17:0,62,1056	0/0:0,10:10:0.24:0,0,0	0/1:1,3:4:0:0,0,0	1/1:31,0:31:84.27:1271,84,0	0/0:15,0:15:10.43:0,10,397	0/0:19,0:19:51.62:0,52,725	0/0:20,0:19:39.60:0,40,566	0/0:3,0:2:6.02:0,6,91
chr10	72702675	.	C	CT	2996.11	PASS	AB=0.895;AC=3;AF=0.054;AN=56;BaseQRankSum=-9.946;DP=743;FS=0.000;HRun=0;HaplotypeScore=101.3305;InbreedingCoeff=0.6459;MQ=74.16;MQ0=2;MQRankSum=-0.267;QD=29.66;ReadPosRankSum=1.387;VQSLOD=3.5545;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,67:67:99:3069,193,0	0/0:13,0:13:39.13:0,39,544	0/0:31,0:16:48.16:0,48,651	0/0:31,0:19:45.12:0,45,592	0/0:24,0:24:72.24:0,72,1001	0/0:28,0:28:84.25:0,84,1151	0/0:21,0:21:57.19:0,57,797	0/0:30,0:30:87.29:0,87,1217	0/0:22,0:22:63.17:0,63,830	0/0:30,0:30:90.29:0,90,1241	0/0:27,0:27:75.25:0,75,1047	0/1:30,4:34:33.56:34,0,836	0/0:24,1:25:40.13:0,40,893	0/0:27,1:28:78.24:0,78,1085	0/0:24,0:24:72.24:0,72,1007	0/0:34,0:33:99:0,102,1411	0/0:32,0:32:96.32:0,96,1342	0/0:15,0:15:45.15:0,45,628	0/0:27,0:27:81.23:0,81,1081	0/0:14,0:14:42.14:0,42,587	0/0:40,0:40:99:0,117,1602	0/0:26,3:29:43.34:0,43,603	0/0:14,3:17:21.03:0,21,293	0/0:16,0:16:47.80:0,48,573	0/0:12,0:12:36.12:0,36,503	0/0:32,0:32:96.32:0,96,1343	0/0:25,0:25:75.23:0,75,1025	0/0:15,0:15:45.15:0,45,624
chr10	72702695	.	CT	C	154.64	PASS	AB=0.630;AC=1;AF=0.018;AN=56;BaseQRankSum=4.307;DP=750;FS=1.227;HRun=1;HaplotypeScore=130.4430;InbreedingCoeff=-0.0196;MQ=58.74;MQ0=6;MQRankSum=-3.869;QD=9.10;ReadPosRankSum=-1.683;VQSLOD=0.5763;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:64:99:0,187,2857	0/0:13,0:13:39.12:0,39,599	0/0:29,0:7:18.02:0,18,253	0/0:36,0:17:32.83:0,33,480	0/0:25,0:25:75.21:0,75,1168	0/0:25,0:25:75.24:0,75,1175	0/0:21,0:21:63.21:0,63,1007	0/0:27,0:26:78.25:0,78,1199	0/0:23,0:23:64.44:0,64,1020	0/0:25,0:25:75.23:0,75,1155	0/0:30,0:30:87.28:0,87,1358	0/0:33,0:33:84.63:0,85,1322	0/0:24,0:24:60.13:0,60,889	0/0:20,0:20:54.18:0,54,863	0/0:26,0:26:78.27:0,78,1241	0/0:30,0:29:90.29:0,90,1413	0/0:30,0:30:90.29:0,90,1411	0/1:7,10:17:99:229,0,293	0/0:24,0:20:60.20:0,60,958	0/0:16,0:16:45.15:0,45,719	0/0:45,0:45:99:0,132,2038	0/0:31,0:31:52.50:0,53,756	0/0:23,0:23:27.01:0,27,373	0/0:19,1:20:12.19:0,12,455	0/0:20,0:20:60.15:0,60,868	0/0:32,0:31:90.27:0,90,1390	0/0:25,0:25:75.22:0,75,1144	0/0:16,0:16:48.13:0,48,720
chr10	72702718	.	CTG	C	748.75	PASS	AB=0.741;AC=5;AF=0.089;AN=56;BaseQRankSum=8.951;DP=738;FS=1.516;HRun=0;HaplotypeScore=144.0872;InbreedingCoeff=-0.0981;MQ=55.84;MQ0=19;MQRankSum=-8.307;QD=6.24;ReadPosRankSum=0.344;VQSLOD=3.0923;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:66:99:0,196,3611	0/0:13,0:13:36.12:0,36,695	0/0:37,0:14:36.12:0,36,635	0/0:44,0:23:66.19:0,66,1200	0/0:24,0:24:72.23:0,72,1356	0/0:22,0:22:57.18:0,57,1057	0/0:22,0:22:66.21:0,66,1240	0/0:26,0:26:78.25:0,78,1440	0/0:24,0:24:72.23:0,72,1338	0/0:30,0:29:87.26:0,87,1608	0/0:34,0:34:99:0,99,1858	0/1:22,9:31:99:240,0,772	0/1:13,6:19:99:203,0,438	0/0:24,0:24:66.18:0,66,1164	0/0:25,0:25:75.23:0,75,1380	0/0:20,0:19:60.17:0,60,1091	0/0:29,0:28:81.22:0,81,1449	0/0:19,0:19:36.12:0,36,662	0/0:14,0:10:27.09:0,27,493	0/0:15,0:15:45.15:0,45,868	0/0:39,0:39:99:0,111,2051	0/1:18,12:30:99:160,0,651	0/1:8,15:23:89.44:234,0,89	0/1:14,3:17:29.09:29,0,164	0/0:26,0:26:78.25:0,78,1472	0/0:32,0:32:93.30:0,93,1723	0/0:19,0:19:57.20:0,57,1088	0/0:14,0:14:42.13:0,42,777
chr10	72702724	.	GTC	G	706.18	PASS	AB=0.732;AC=5;AF=0.089;AN=56;BaseQRankSum=9.046;DP=712;FS=1.501;HRun=0;HaplotypeScore=142.7823;InbreedingCoeff=-0.0979;MQ=56.77;MQ0=17;MQRankSum=-8.555;QD=6.19;ReadPosRankSum=1.144;VQSLOD=3.3760;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,184,3673	0/0:13,0:13:39.13:0,39,762	0/0:32,0:17:42.14:0,42,843	0/0:38,0:23:66.23:0,66,1331	0/0:24,0:24:72.25:0,72,1462	0/0:21,0:21:57.18:0,57,1090	0/0:23,0:23:69.22:0,69,1287	0/0:26,0:26:78.27:0,78,1557	0/0:21,0:21:63.18:0,63,1180	0/0:27,0:26:78.27:0,78,1566	0/0:34,0:34:99:0,99,1950	0/1:21,9:30:99:243,0,821	0/1:12,6:18:99:189,0,422	0/0:22,0:22:63.22:0,63,1256	0/0:25,0:25:75.26:0,75,1503	0/0:24,0:23:72.23:0,72,1418	0/0:28,0:27:78.27:0,78,1563	0/0:18,0:18:36.10:0,36,658	0/0:14,0:11:33.10:0,33,636	0/0:16,0:16:48.16:0,48,963	0/0:37,0:37:99:0,111,2142	0/1:15,12:27:99:155,0,564	0/1:8,15:23:77.72:214,0,78	0/1:13,3:16:21.92:22,0,157	0/0:27,0:27:81.26:0,81,1598	0/0:34,0:34:96.31:0,96,1826	0/0:19,0:19:57.20:0,57,1155	0/0:13,0:13:39.13:0,39,784
chr10	72702739	.	CTGTATG	C	5259.22	PASS	AB=0.645;AC=9;AF=0.161;AN=56;BaseQRankSum=13.312;DP=738;FS=2.018;HRun=0;HaplotypeScore=191.4662;InbreedingCoeff=0.8676;MQ=68.96;MQ0=7;MQRankSum=-13.904;QD=40.15;ReadPosRankSum=-1.357;VQSLOD=4.3151;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,169,5955	0/0:13,0:13:39.12:0,39,1281	0/0:30,0:24:66.23:0,66,2365	0/0:35,0:26:75.26:0,75,2645	0/0:27,0:27:81.28:0,81,2912	0/0:22,0:22:63.19:0,63,2214	0/0:21,0:21:63.20:0,63,2109	0/0:24,0:24:72.23:0,72,2316	0/0:20,0:20:60.21:0,60,2146	0/0:33,0:32:90.30:0,90,3138	0/0:33,0:33:96.32:0,96,3517	1/1:5,23:28:54.95:1194,55,0	1/1:2,20:22:51.11:1157,51,0	0/0:22,0:22:66.23:0,66,2415	0/0:25,0:25:75.24:0,75,2659	0/0:28,0:27:84.29:0,84,3036	0/0:28,0:27:75.26:0,75,2695	0/0:19,0:19:42.14:0,42,1522	0/0:20,0:18:54.19:0,54,1969	0/0:19,0:19:57.20:0,57,2047	0/0:37,0:37:99:0,105,3447	1/1:0,32:32:65.35:1512,65,0	1/1:1,28:29:48.16:1158,48,0	0/1:9,11:20:37.60:238,0,38	0/0:25,0:25:75.26:0,75,2696	0/0:35,0:35:99:0,105,3721	0/0:21,0:21:63.22:0,63,2220	0/0:13,0:13:39.13:0,39,1429
chr10	72702742	.	T	TG	452.73	PASS	AB=0.985;AC=7;AF=0.125;AN=56;BaseQRankSum=8.539;DP=734;FS=7.578;HRun=1;HaplotypeScore=139.1727;InbreedingCoeff=0.4392;MQ=70.55;MQ0=5;MQRankSum=-8.770;QD=3.59;ReadPosRankSum=-0.786;VQSLOD=-0.3828;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,172,2367	0/0:14,0:14:39.11:0,39,525	0/0:28,0:23:66.22:0,66,910	0/0:34,0:27:78.23:0,78,1055	0/0:28,0:28:81.27:0,81,1131	0/0:23,0:23:66.19:0,66,887	0/0:22,0:22:66.22:0,66,918	0/0:24,0:24:69.22:0,69,949	0/0:22,0:22:63.20:0,63,864	0/0:31,0:30:87.29:0,87,1217	0/0:33,0:33:96.28:0,96,1343	1/1:23,4:27:13.57:258,14,0	0/1:20,1:21:16.16:55,0,16	0/0:24,0:24:72.23:0,72,988	0/0:24,0:24:72.24:0,72,1007	0/0:28,0:27:84.28:0,84,1174	0/0:27,0:26:75.25:0,75,1048	0/0:19,0:19:42.14:0,42,587	0/0:19,0:18:54.18:0,54,754	0/0:20,0:20:57.19:0,57,797	0/0:35,0:35:96.30:0,96,1324	0/1:32,0:32:5.84:200,0,6	0/1:28,0:28:28.46:31,0,28	1/1:15,3:18:0.08:37,0,0	0/0:25,0:25:75.25:0,75,1049	0/0:36,0:36:99:0,108,1475	0/0:21,0:21:63.21:0,63,876	0/0:13,0:13:39.13:0,39,545
chr10	72702743	.	A	AACC	1262.41	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.414;DP=735;FS=4.007;HRun=0;HaplotypeScore=170.9970;InbreedingCoeff=0.9958;MQ=71.25;MQ0=4;MQRankSum=-13.758;QD=10.02;ReadPosRankSum=-1.607;VQSLOD=3.1639;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,171,3139	0/0:14,0:14:39.12:0,39,696	0/0:27,0:23:66.23:0,66,1221	0/0:34,0:27:74.58:0,75,1372	0/0:28,0:28:84.26:0,84,1504	0/0:23,0:23:69.22:0,69,1238	0/0:22,0:22:66.21:0,66,1191	0/0:24,0:24:72.22:0,72,1247	0/0:22,0:22:66.21:0,66,1185	0/0:31,0:30:90.29:0,90,1619	0/0:33,0:33:96.33:0,96,1790	1/1:23,4:27:28.67:496,29,0	1/1:20,1:21:15.08:266,15,0	0/0:24,0:24:72.25:0,72,1335	0/0:24,0:24:72.25:0,72,1343	0/0:28,0:27:84.29:0,84,1566	0/0:28,0:27:75.24:0,75,1366	0/0:19,0:19:42.14:0,42,783	0/0:18,0:18:54.19:0,54,1007	0/0:23,0:23:60.19:0,60,1087	0/0:34,0:34:99:0,99,1786	1/1:32,0:32:57.09:261,57,0	1/1:28,0:28:38.74:194,39,0	1/1:15,3:18:26.62:219,27,0	0/0:25,0:25:75.26:0,75,1392	0/0:36,0:36:99:0,108,2001	0/0:21,0:21:63.19:0,63,1141	0/0:13,0:13:39.13:0,39,727
chr10	72702745	.	G	GAGACCTC	4108.96	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.482;DP=736;FS=5.761;HRun=0;HaplotypeScore=216.5576;InbreedingCoeff=0.9988;MQ=73.03;MQ0=3;MQRankSum=-13.093;QD=31.61;ReadPosRankSum=-1.243;VQSLOD=2.6919;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,166,4581	0/0:13,0:13:39.13:0,39,1055	0/0:26,0:25:69.22:0,69,1835	0/0:33,0:28:74.54:0,75,2062	0/0:27,0:27:81.28:0,81,2231	0/0:23,0:23:69.24:0,69,1866	0/0:20,0:20:60.21:0,60,1676	0/0:22,0:22:63.22:0,63,1711	0/0:21,0:21:63.22:0,63,1716	0/0:30,0:30:90.29:0,90,2368	0/0:33,0:33:96.31:0,96,2684	1/1:25,4:29:32.01:1395,32,0	1/1:21,1:22:26.33:771,26,0	0/0:24,0:24:72.25:0,72,2001	0/0:25,0:25:75.24:0,75,2024	0/0:28,0:27:84.27:0,84,2281	0/0:29,0:28:75.24:0,75,2036	0/0:20,0:20:42.14:0,42,1163	0/0:19,0:19:54.19:0,54,1490	0/0:25,0:25:69.19:0,69,1653	0/0:38,0:38:99:0,99,2647	1/1:32,0:32:23.74:676,24,0	1/1:28,0:28:38.64:818,39,0	1/1:16,3:19:26.66:450,27,0	0/0:25,0:25:72.25:0,72,2013	0/0:36,0:36:99:0,108,2990	0/0:20,0:20:60.19:0,60,1611	0/0:13,0:13:39.13:0,39,1090
chr10	72706284	.	A	AGAGGGAGG	537.07	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.972;DP=453;FS=1.803;HRun=0;HaplotypeScore=109.2441;InbreedingCoeff=0.6755;MQ=62.54;MQ0=1;MQRankSum=-3.813;QD=28.27;ReadPosRankSum=0.200;VQSLOD=3.4886;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,11:19:15.05:625,15,0	0/0:5,0:5:12.04:0,12,279	0/0:18,0:11:3.01:0,3,44	0/0:21,0:15:11.82:0,12,246	0/0:18,0:18:42.11:0,42,963	0/0:17,0:17:36.11:0,36,839	0/0:33,0:33:75.25:0,75,1637	0/0:13,0:13:24.06:0,24,424	0/0:12,0:12:36.12:0,36,885	0/0:18,0:18:36.12:0,36,819	0/0:11,0:11:21.07:0,21,543	0/0:21,0:21:39.13:0,39,1009	0/0:17,0:17:36.12:0,36,899	0/0:22,0:22:57.18:0,57,1365	0/0:13,0:13:36.11:0,36,822	0/0:14,0:14:36.12:0,36,903	0/0:22,0:22:36.02:0,36,781	0/0:11,0:11:15.05:0,15,355	0/0:10,0:10:12.03:0,12,261	0/0:10,0:10:18.04:0,18,413	0/0:32,0:32:66.22:0,66,1547	0/0:14,0:14:36.11:0,36,821	0/0:5,0:5:15.05:0,15,388	0/0:18,0:18:15.05:0,15,358	0/0:12,0:12:33.07:0,33,745	0/0:17,0:17:33.11:0,33,852	0/0:26,0:26:54.15:0,54,1314	0/0:3,0:3:6.02:0,6,155
chr10	72707157	.	AAACAACAAC	A	1320.85	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.508;DP=690;FS=0.000;HRun=0;HaplotypeScore=190.3628;InbreedingCoeff=0.9986;MQ=65.31;MQ0=0;MQRankSum=-6.951;QD=57.43;ReadPosRankSum=0.975;VQSLOD=3.0295;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:51.17:1416,51,0	0/0:18,0:18:45.15:0,45,2029	0/0:33,0:26:66.23:0,66,2763	0/0:14,0:14:28.34:0,28,1042	0/0:35,0:35:87.28:0,87,3765	0/0:19,0:19:51.18:0,51,2376	0/0:29,0:29:63.22:0,63,2848	0/0:32,0:32:75.23:0,75,2782	0/0:21,0:21:54.16:0,54,2366	0/0:28,0:28:69.22:0,69,2384	0/0:29,0:29:66.22:0,66,2488	0/0:16,0:16:45.15:0,45,2050	0/0:26,0:26:69.24:0,69,3127	0/0:24,0:24:66.23:0,66,2927	0/0:27,0:27:75.26:0,75,3439	0/0:15,0:15:39.13:0,39,1792	0/0:20,0:20:51.18:0,51,2044	0/0:33,0:33:90.27:0,90,3857	0/0:22,0:23:63.19:0,63,2515	0/0:37,0:37:99:0,105,4623	0/0:15,0:15:39.13:0,39,1827	0/0:27,0:27:72.25:0,72,3132	0/0:20,0:20:54.17:0,54,2350	0/0:20,0:19:51.18:0,51,2308	0/0:35,0:35:90.31:0,90,3638	0/0:29,0:29:75.24:0,75,3263	0/0:30,0:30:75.26:0,75,3321	0/0:12,0:12:30.10:0,30,1405
chr10	72708916	.	CAAA	C	1507.47	PASS	AB=0.702;AC=13;AF=0.232;AN=56;BaseQRankSum=3.865;DP=502;FS=6.951;HRun=16;HaplotypeScore=80.0435;InbreedingCoeff=0.5000;MQ=67.96;MQ0=2;MQRankSum=-0.639;QD=8.42;ReadPosRankSum=4.840;VQSLOD=-0.3086;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:8,1:23:29.06:29,0,39	0/0:5,0:7:18.05:0,18,266	0/1:20,0:10:4.04:4,0,65	0/0:14,0:10:15.41:0,15,176	0/0:21,0:23:34.62:0,35,446	0/0:18,0:19:51.14:0,51,722	0/0:13,0:15:30.07:0,30,420	0/0:24,0:29:64.18:0,64,807	0/0:20,0:20:39.09:0,39,530	1/1:7,14:22:44.80:469,45,0	1/1:5,7:13:16.62:177,17,0	0/0:5,0:6:7.17:0,7,43	0/0:8,0:10:15.52:0,16,106	0/0:13,0:14:39.09:0,39,535	0/0:12,0:12:36.05:0,36,464	0/0:12,0:13:31.27:0,31,379	1/1:9,12:22:36.87:400,37,0	0/0:13,0:22:54.16:0,54,458	0/0:14,0:15:28.34:0,28,454	0/0:15,0:18:32.96:0,33,427	0/0:7,0:7:18.03:0,18,239	0/1:6,1:18:13.83:14,0,34	0/1:8,2:15:37.86:48,0,38	0/1:6,1:15:17.51:18,0,28	1/1:10,21:31:32.81:523,33,0	0/0:27,2:30:13.41:0,13,812	0/0:26,0:28:68.98:0,69,761	0/0:19,0:20:38.07:0,38,483
chr10	72711601	.	A	ATGG	5880.37	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-9.747;DP=596;FS=1.940;HRun=0;HaplotypeScore=75.0996;InbreedingCoeff=0.9989;MQ=57.32;MQ0=16;MQRankSum=-2.160;QD=51.13;ReadPosRankSum=4.172;VQSLOD=7.1897;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:26:50.65:1426,51,0	0/0:25,0:25:75.24:0,75,1220	0/0:22,0:13:33.11:0,33,538	0/0:28,0:19:54.18:0,54,900	0/0:13,0:13:36.12:0,36,599	0/0:21,0:21:60.19:0,60,975	0/0:21,0:20:51.17:0,51,844	0/0:29,0:29:21.31:0,21,993	0/0:23,0:23:57.19:0,57,946	1/1:6,17:20:57.20:1264,57,0	1/1:5,12:15:33.11:746,33,0	0/0:23,0:22:66.23:0,66,1100	0/0:23,0:23:66.23:0,66,1099	0/0:22,0:22:60.21:0,60,1000	0/0:26,0:26:75.26:0,75,1250	0/0:24,0:24:66.23:0,66,1097	1/1:1,14:15:42.14:950,42,0	1/1:0,13:13:36.12:816,36,0	0/0:18,0:16:48.15:0,48,768	0/0:14,0:14:39.13:0,39,647	0/0:25,0:24:72.25:0,72,1199	0/0:23,0:23:66.23:0,66,1100	0/0:18,0:18:51.17:0,51,849	0/0:18,0:18:51.17:0,51,843	1/1:3,17:18:30.10:679,30,0	0/0:27,0:27:78.27:0,78,1300	0/0:26,0:26:66.22:0,66,1079	0/0:12,0:12:36.12:0,36,600
chr10	72711682	.	A	AAATC	801.26	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.825;DP=691;FS=3.699;HRun=0;HaplotypeScore=102.3945;InbreedingCoeff=0.9684;MQ=58.98;MQ0=7;MQRankSum=0.797;QD=40.06;ReadPosRankSum=1.248;VQSLOD=3.9738;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,12:18:17.28:891,17,0	0/0:16,0:16:15.05:0,15,245	0/0:44,0:15:42.06:0,42,581	0/0:33,0:13:29.07:0,29,341	0/0:27,0:27:72.24:0,72,1148	0/0:17,0:17:39.13:0,39,637	0/0:21,0:21:33.10:0,33,502	0/0:36,0:36:42.13:0,42,640	0/0:23,0:23:57.17:0,57,883	0/0:22,0:20:39.13:0,39,636	0/0:21,0:20:41.95:0,42,638	0/0:24,0:24:48.14:0,48,738	0/0:21,0:21:45.15:0,45,734	0/0:26,0:26:60.20:0,60,955	0/0:36,0:36:90.30:0,90,1446	0/0:35,0:35:84.29:0,84,1362	0/0:26,0:26:72.20:0,72,1098	0/0:16,0:16:45.15:0,45,700	0/0:20,0:18:30.09:0,30,465	0/0:10,0:10:21.07:0,21,343	0/0:31,0:30:69.22:0,69,1097	0/0:25,0:25:57.19:0,57,927	0/0:22,0:22:60.19:0,60,952	0/0:17,0:17:30.10:0,30,486	0/0:27,0:25:57.18:0,57,907	0/0:31,0:31:75.26:0,75,1223	0/0:30,0:30:72.25:0,72,1171	0/0:14,0:14:30.09:0,30,465
chr10	72713913	.	G	GA	391.71	PASS	AB=0.937;AC=5;AF=0.089;AN=56;BaseQRankSum=-3.320;DP=588;FS=1.561;HRun=11;HaplotypeScore=62.9094;InbreedingCoeff=0.3241;MQ=70.63;MQ0=2;MQRankSum=-0.524;QD=5.52;ReadPosRankSum=-2.491;VQSLOD=1.0066;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:40.55:0,41,400	0/0:18,0:19:40.85:0,41,308	0/1:20,1:15:5.45:5,0,91	0/1:17,0:16:20.24:20,0,55	0/0:30,0:30:68.71:0,69,534	0/0:17,0:18:49.85:0,50,377	0/0:15,0:16:43.88:0,44,331	0/0:33,1:34:44.26:0,44,527	0/0:14,0:14:41.84:0,42,325	0/0:26,0:26:61.75:0,62,467	0/0:22,0:22:50.78:0,51,395	0/0:16,1:19:13.43:0,13,277	0/0:18,0:18:41.83:0,42,325	0/0:19,0:19:47.77:0,48,371	0/0:24,0:24:53.75:0,54,416	0/0:12,2:14:5.42:0,5,225	0/0:15,1:16:8.36:0,8,246	1/1:5,16:21:45.09:457,45,0	0/0:32,0:33:76.70:0,77,586	0/0:31,0:31:80.47:0,80,617	0/0:8,0:8:20.92:0,21,163	0/0:24,0:24:68.72:0,69,534	0/0:25,0:25:68.73:0,69,534	0/1:10,2:12:28.01:28,0,174	0/0:25,0:25:65.72:0,66,511	0/0:21,0:21:50.78:0,51,395	0/0:28,0:29:79.71:0,80,609	0/0:7,0:8:22.96:0,23,168
chr10	72715585	.	CACAT	C	152.09	PASS	AB=0.984;AC=8;AF=0.143;AN=56;BaseQRankSum=5.219;DP=658;FS=3.437;HRun=0;HaplotypeScore=114.8592;InbreedingCoeff=0.3067;MQ=67.07;MQ0=11;MQRankSum=-2.195;QD=1.64;ReadPosRankSum=-3.759;VQSLOD=1.3147;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:21.91:0,22,373	0/0:10,0:10:5.24:0,5,366	0/0:42,0:19:37.37:0,37,418	0/0:54,0:28:64.71:0,65,561	0/0:19,0:19:35.78:0,36,344	0/0:21,0:21:42.07:0,42,559	0/0:30,0:29:75.85:0,76,990	0/0:24,0:23:59.33:0,59,512	0/0:22,0:22:34.23:0,34,618	0/0:19,0:19:19.50:0,20,550	0/0:12,0:12:9:0,9,85	0/1:28,0:28:6.28:6,0,337	1/1:2,24:26:8.91:148,9,0	0/0:18,0:18:23.90:0,24,476	0/0:31,0:31:70.64:0,71,755	0/0:32,0:32:55.05:0,55,929	0/0:24,0:24:32.12:0,32,412	0/1:14,1:14:78.74:79,0,157	0/0:19,0:19:35.58:0,36,311	0/0:13,0:13:29.99:0,30,346	0/0:57,0:57:61.02:0,61,1339	0/1:13,0:13:18.76:19,0,125	0/0:14,0:12:8.17:0,8,155	0/0:24,0:24:8.14:0,8,300	0/1:10,0:10:4.29:4,0,108	0/0:30,0:29:79.95:0,80,1130	0/0:17,0:17:37.72:0,38,391	1/1:1,0:1:2.98:21,3,0
chr10	72715589	.	TACAC	T	533.88	PASS	AB=0.794;AC=14;AF=0.269;AN=52;BaseQRankSum=4.611;DP=685;FS=0.000;HRun=0;HaplotypeScore=117.5982;InbreedingCoeff=0.5446;MQ=62.52;MQ0=11;MQRankSum=0.123;QD=3.24;ReadPosRankSum=0.761;VQSLOD=1.8975;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:33:9.01:84,9,0	0/0:10,0:11:18.26:0,18,284	./.	./.	0/0:23,0:23:14.87:0,15,155	0/0:20,0:23:23.78:0,24,379	0/0:30,0:35:34.96:0,35,588	0/0:23,0:22:2.88:0,3,15	0/0:21,0:22:20.33:0,20,359	0/0:22,0:22:25.26:0,25,340	0/0:13,0:13:6.02:0,6,110	0/1:30,1:34:9.55:159,0,10	1/1:26,0:26:8.89:102,9,0	0/0:22,0:22:13.74:0,14,277	0/0:29,0:30:23.78:0,24,318	0/0:27,0:32:31.02:0,31,667	0/0:22,0:22:12.04:0,12,201	0/1:10,8:17:25.80:124,0,26	0/0:15,0:15:3.01:0,3,40	0/0:14,0:14:9.03:0,9,169	0/0:61,0:62:59.27:0,59,863	1/1:8,6:14:7.84:97,8,0	1/1:9,3:10:3.01:33,3,0	1/1:20,7:27:0.76:43,1,0	0/0:10,0:10:9.42:0,9,132	0/0:31,0:30:35.13:0,35,568	0/0:18,0:18:23.94:0,24,259	1/1:0,1:1:3.01:46,3,0
chr10	72716322	.	ATCACT	A	1630.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.272;DP=566;FS=0.000;HRun=0;HaplotypeScore=103.9309;InbreedingCoeff=0.9824;MQ=75.67;MQ0=0;MQRankSum=-3.739;QD=49.41;ReadPosRankSum=0.937;VQSLOD=3.7857;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:81.28:1726,81,0	0/0:6,0:6:18.06:0,18,564	0/0:12,0:12:36.12:0,36,1095	0/0:10,0:11:29.50:0,30,694	0/0:24,0:24:63.20:0,63,1859	0/0:20,0:20:60.21:0,60,1876	0/0:16,0:16:45.15:0,45,1384	0/0:29,0:29:87.28:0,87,2496	0/0:26,0:26:78.25:0,78,2368	0/0:35,0:35:99:0,99,2902	0/0:12,0:12:36.08:0,36,1053	0/0:19,0:19:54.19:0,54,1681	0/0:22,0:22:66.21:0,66,1902	0/0:16,0:16:45.15:0,45,1401	0/0:15,0:15:45.15:0,45,1407	0/0:18,0:18:51.18:0,51,1545	0/0:29,0:29:78.27:0,78,2414	0/0:19,0:19:48.15:0,48,1410	0/0:36,0:36:99:0,105,3244	0/0:19,0:19:57.20:0,57,1695	0/0:10,0:10:27.09:0,27,845	0/0:20,0:19:48.16:0,48,1495	0/0:25,0:25:69.24:0,69,2161	0/0:24,0:24:69.24:0,69,2148	0/0:23,0:23:69.24:0,69,2142	0/0:23,0:23:69.24:0,69,2121	0/0:17,0:16:51.18:0,51,1597	0/0:7,0:7:18.06:0,18,563
chr10	72716411	.	CA	C	533.33	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.385;DP=598;FS=2.081;HRun=1;HaplotypeScore=58.6827;InbreedingCoeff=0.9988;MQ=86.47;MQ0=0;MQRankSum=-2.440;QD=31.37;ReadPosRankSum=1.762;VQSLOD=3.4229;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.20:0,60,957	0/0:13,0:13:39.13:0,39,623	0/0:21,0:21:60.15:0,60,890	0/0:21,0:21:28.15:0,28,686	0/0:20,0:20:57.15:0,57,883	0/0:19,0:19:57.18:0,57,883	0/0:19,0:19:57.18:0,57,886	0/0:29,0:29:87.27:0,87,1329	0/0:17,0:17:51.17:0,51,812	0/0:26,0:26:75.26:0,75,1198	0/0:25,0:25:63.18:0,63,959	0/0:29,0:29:87.27:0,87,1340	0/0:16,0:16:48.15:0,48,744	0/0:17,0:17:51.16:0,51,791	0/0:19,0:19:57.19:0,57,911	0/0:16,0:16:48.16:0,48,765	0/0:15,0:15:45.15:0,45,719	1/1:0,17:17:45.15:628,45,0	0/0:29,0:29:87.27:0,87,1329	0/0:25,0:25:72.25:0,72,1146	0/0:22,0:22:66.23:0,66,1055	0/0:16,0:16:48.16:0,48,767	0/0:24,0:24:69.22:0,69,1078	0/0:17,0:17:51.17:0,51,815	0/0:22,0:22:66.22:0,66,1049	0/0:34,0:34:99:0,102,1630	0/0:35,0:35:99:0,105,1617	0/0:11,0:11:33.11:0,33,527
chr10	72718150	.	AACACACACAC	A	308.12	PASS	AB=0.870;AC=6;AF=0.125;AN=48;BaseQRankSum=3.568;DP=449;FS=2.785;HRun=0;HaplotypeScore=175.2088;InbreedingCoeff=0.2984;MQ=59.93;MQ0=8;MQRankSum=-3.064;QD=6.29;ReadPosRankSum=-0.235;VQSLOD=2.7232;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:12.04:0,12,280	0/0:4,0:5:6.02:0,6,226	./.	./.	0/0:22,0:22:33.11:0,33,1324	0/0:16,0:15:14.78:0,15,549	0/0:19,0:19:18.06:0,18,492	0/0:24,0:22:4.32:0,4,24	0/0:10,0:10:6.01:0,6,69	0/0:27,0:26:45.52:0,46,1069	0/0:13,0:13:21.07:0,21,598	0/1:13,2:15:15.74:167,0,16	1/1:12,1:12:3.01:88,3,0	0/0:8,0:8:15.05:0,15,535	0/0:23,0:24:23.79:0,24,724	0/0:12,0:12:9.02:0,9,181	0/1:10,1:12:76.25:76,0,193	0/0:13,0:13:9.18:0,9,263	0/0:13,0:13:6.02:0,6,134	0/0:16,0:18:18.06:0,18,510	0/0:14,0:12:15.05:0,15,491	1/1:8,1:9:3.01:88,3,0	./.	./.	0/0:24,0:23:24.55:0,25,780	0/0:23,0:23:26.51:0,27,799	0/0:14,0:13:18.06:0,18,629	0/0:8,0:8:6.91:0,7,150
chr10	72719490	.	TCAGATCA	T	2233.28	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.676;DP=698;FS=12.488;HRun=0;HaplotypeScore=153.7878;InbreedingCoeff=0.9443;MQ=64.48;MQ0=0;MQRankSum=-9.178;QD=51.94;ReadPosRankSum=0.205;VQSLOD=3.0669;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,37:43:90.31:2328,90,0	0/0:9,0:9:27.08:0,27,904	0/0:30,0:29:83.96:0,84,3109	0/0:34,0:34:93.30:0,93,3242	0/0:44,0:44:99:0,132,5162	0/0:14,0:14:42.14:0,42,1622	0/0:16,0:16:48.15:0,48,1707	0/0:37,0:37:99:0,111,4453	0/0:24,0:24:69.24:0,69,2739	0/0:27,0:27:81.28:0,81,3112	0/0:17,0:17:51.18:0,51,2020	0/0:31,0:31:90.31:0,90,3472	0/0:20,0:20:57.20:0,57,2304	0/0:26,0:26:75.26:0,75,3012	0/0:32,0:32:96.33:0,96,3591	0/0:22,0:22:66.21:0,66,2488	0/0:30,0:30:90.31:0,90,3651	0/0:22,0:22:66.23:0,66,2519	0/0:19,0:19:57.20:0,57,2248	0/0:33,0:33:93.29:0,93,3475	0/0:35,0:35:99:0,102,4145	0/0:23,0:23:66.23:0,66,2506	0/0:15,0:15:45.15:0,45,1707	0/0:20,0:20:54.19:0,54,2211	0/0:21,0:21:63.22:0,63,2486	0/0:26,0:26:78.26:0,78,2925	0/0:25,0:25:72.25:0,72,2839	0/0:3,0:3:9.03:0,9,368
chr10	72723079	.	C	CA	7611.05	PASS	AC=48;AF=0.960;AN=50;BaseQRankSum=-0.926;DP=297;FS=19.127;HRun=1;HaplotypeScore=51.0441;InbreedingCoeff=0.6044;MQ=42.01;MQ0=3;MQRankSum=-2.972;QD=28.72;ReadPosRankSum=2.199;VQSLOD=3.2436;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,7:7:12.04:180,12,0	1/1:0,7:7:21.07:314,21,0	0/0:5,0:3:8.98:0,9,92	./.	1/1:1,16:17:18.02:243,18,0	1/1:3,12:15:24.08:359,24,0	1/1:0,3:3:6.02:90,6,0	1/1:2,6:8:18.02:244,18,0	1/1:0,10:10:21.07:314,21,0	1/1:0,17:16:48.16:719,48,0	1/1:0,11:11:26.91:349,27,0	1/1:0,10:10:18.06:269,18,0	1/1:0,9:9:24.08:359,24,0	1/1:0,9:9:27.09:404,27,0	1/1:1,8:8:21.06:294,21,0	1/1:3,7:10:12.04:180,12,0	1/1:0,10:10:15.05:224,15,0	1/1:0,5:5:15.05:224,15,0	1/1:1,8:8:21.07:314,21,0	1/1:27,0:27:3.01:45,3,0	1/1:0,5:3:9.03:135,9,0	./.	1/1:1,10:11:27.09:399,27,0	./.	1/1:0,17:15:38.99:534,39,0	1/1:1,10:11:33.10:476,33,0	1/1:1,20:20:48.16:718,48,0	1/1:0,6:6:15.05:225,15,0
chr10	72723084	.	A	AG	6829.99	PASS	AC=46;AF=0.958;AN=48;BaseQRankSum=-1.982;DP=267;FS=26.735;HRun=1;HaplotypeScore=51.4286;InbreedingCoeff=0.6046;MQ=39.92;MQ0=2;MQRankSum=-2.435;QD=31.77;ReadPosRankSum=1.832;VQSLOD=3.0722;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:6:12.04:179,12,0	1/1:1,6:7:18.01:263,18,0	0/0:4,0:3:5.99:0,6,61	./.	1/1:0,16:16:15.05:208,15,0	1/1:1,11:12:24.04:334,24,0	1/1:0,3:3:6.02:90,6,0	1/1:3,2:5:9.03:134,9,0	1/1:0,10:10:21.02:288,21,0	1/1:0,16:15:45.15:673,45,0	1/1:0,10:10:20.90:258,21,0	1/1:1,8:9:18.06:269,18,0	1/1:1,8:9:23.91:303,24,0	1/1:0,9:9:27.09:403,27,0	1/1:0,8:7:18.06:269,18,0	1/1:1,5:6:12.04:179,12,0	1/1:2,7:9:14.98:197,15,0	1/1:0,5:5:15:198,15,0	1/1:1,6:7:18.01:269,18,0	./.	1/1:0,5:3:8.96:108,9,0	./.	1/1:0,10:10:26.79:343,27,0	./.	1/1:0,17:15:36.12:508,36,0	1/1:0,10:10:30.10:448,30,0	1/1:2,17:18:48.16:711,48,0	1/1:0,6:6:14.98:197,15,0
chr10	72723333	.	T	TA	616.07	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.729;DP=390;FS=6.363;HRun=7;HaplotypeScore=43.2782;InbreedingCoeff=0.8482;MQ=64.03;MQ0=0;MQRankSum=1.175;QD=24.64;ReadPosRankSum=0.492;VQSLOD=3.6399;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,18:25:59.36:711,59,0	0/0:7,0:7:18.03:0,18,174	0/0:9,0:7:12.08:0,12,126	0/0:3,0:3:6.01:0,6,58	0/0:20,0:20:53.76:0,54,503	0/0:19,0:19:54.09:0,54,521	0/0:10,0:10:24.04:0,24,232	0/0:28,0:28:69.10:0,69,666	0/0:8,0:8:24.03:0,24,226	0/0:14,0:12:36.06:0,36,347	0/0:12,0:12:30.04:0,30,284	0/0:10,0:10:27.04:0,27,261	0/0:20,0:20:57.09:0,57,549	0/0:9,0:9:24.03:0,24,232	0/0:14,0:14:42.07:0,42,405	0/0:9,0:9:24.03:0,24,232	0/0:16,0:16:33.04:0,33,319	0/0:25,0:25:72.08:0,72,686	0/0:11,0:11:33.05:0,33,319	0/0:23,0:23:57.02:0,57,539	0/0:9,0:9:24.04:0,24,232	0/0:11,0:11:29.98:0,30,268	0/0:19,0:19:51.07:0,51,486	0/0:8,0:8:21.03:0,21,203	0/0:10,0:10:30.03:0,30,283	0/0:12,0:11:27.04:0,27,261	0/0:24,0:24:66.10:0,66,637	0/0:5,0:5:15.02:0,15,145
chr10	72725075	.	TAAG	T	4275.07	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.677;DP=613;FS=0.000;HRun=0;HaplotypeScore=86.4116;InbreedingCoeff=0.9985;MQ=75.33;MQ0=0;MQRankSum=-2.658;QD=39.22;ReadPosRankSum=1.446;VQSLOD=5.5357;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.20:0,57,1254	0/0:10,0:10:30.10:0,30,654	0/0:14,0:14:33.11:0,33,673	0/0:8,0:8:21.07:0,21,447	0/0:29,0:29:87.30:0,87,1885	0/0:20,0:20:60.21:0,60,1339	0/0:17,0:17:45.15:0,45,986	0/0:36,0:36:99:0,105,2346	0/0:18,0:18:54.19:0,54,1206	1/1:2,31:33:93.30:1486,93,0	1/1:2,24:26:60.16:927,60,0	0/0:28,0:28:75.26:0,75,1645	0/0:14,0:14:39.13:0,39,871	0/0:16,0:16:45.14:0,45,956	0/0:18,0:18:45.15:0,45,1005	0/0:24,0:24:72.25:0,72,1608	1/1:2,11:13:30.10:490,30,0	0/0:24,0:24:66.23:0,66,1444	0/0:19,0:19:51.18:0,51,1140	0/0:35,0:35:99:0,102,2236	0/0:21,0:21:60.21:0,60,1340	0/0:21,0:21:63.22:0,63,1407	0/0:25,0:25:66.23:0,66,1457	0/0:15,0:15:45.15:0,45,1005	1/1:2,35:37:84.29:1372,84,0	0/0:34,0:34:96.33:0,96,2095	0/0:25,0:25:75.26:0,75,1640	0/0:14,0:14:42.14:0,42,937
chr10	72726583	.	CCACAGCACA	C	3745.70	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=10.527;DP=795;FS=22.764;HRun=0;HaplotypeScore=221.0062;InbreedingCoeff=0.9543;MQ=71.88;MQ0=2;MQRankSum=-10.945;QD=27.54;ReadPosRankSum=-4.193;VQSLOD=1.4371;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:20,14:34:33.11:824,33,0	0/0:17,0:17:24.08:0,24,959	0/0:33,0:28:15.04:0,15,264	0/0:30,0:27:12.93:0,13,356	0/0:17,0:17:24.07:0,24,845	0/0:16,0:16:30.10:0,30,1302	0/0:26,0:26:51.18:0,51,2185	0/0:23,0:23:9.03:0,9,336	0/0:25,0:25:33.11:0,33,1495	0/0:36,0:36:54.18:0,54,2144	0/0:19,0:19:27.09:0,27,1077	1/1:16,20:36:41.61:1112,42,0	1/1:7,13:20:24.08:657,24,0	0/0:33,0:33:45.15:0,45,1982	0/0:39,0:39:66.23:0,66,2779	0/0:27,0:27:51.18:0,51,2247	0/0:44,0:44:84.29:0,84,3732	0/0:26,0:26:25.33:0,25,909	0/0:14,0:12:9.03:0,9,409	0/0:20,0:20:18.06:0,18,753	0/0:95,0:94:99:0,190,7945	1/1:13,12:25:29.58:734,30,0	1/1:16,5:21:18.06:419,18,0	./.	0/0:29,0:29:48.16:0,48,2025	0/0:27,0:27:36.12:0,36,1604	0/0:19,0:19:54.19:0,54,2283	0/0:11,0:11:15.05:0,15,680
chr10	72728546	.	G	GAC	2751.21	PASS	AB=0.663;AC=6;AF=0.107;AN=56;BaseQRankSum=-8.189;DP=685;FS=1.024;HRun=0;HaplotypeScore=102.7635;InbreedingCoeff=0.0167;MQ=62.92;MQ0=5;MQRankSum=1.709;QD=18.22;ReadPosRankSum=1.040;VQSLOD=3.6195;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:47.61:0,48,475	0/0:9,0:9:15.04:0,15,171	0/0:38,0:24:14.15:0,14,151	0/0:19,0:14:6.02:0,6,65	0/0:29,0:29:57.09:0,57,649	0/0:26,0:26:34.34:0,34,379	0/0:17,0:21:32.69:0,33,301	0/0:32,0:36:38.43:0,38,355	0/0:27,0:30:44.62:0,45,452	0/0:11,0:29:39.94:0,40,217	0/0:9,0:21:25.57:0,26,126	0/1:7,15:22:17.22:639,0,17	0/1:9,16:25:91.63:463,0,92	0/0:23,0:28:53.65:0,54,555	0/0:27,0:29:70.40:0,70,740	0/0:15,0:17:23.73:0,24,233	0/0:8,0:18:25.57:0,26,126	0/0:8,0:16:11.36:0,11,56	0/0:23,0:24:19.32:0,19,314	0/0:21,0:21:33.09:0,33,376	0/0:15,0:15:36.10:0,36,410	0/1:8,19:27:14.61:680,0,15	0/1:12,9:22:69.45:336,0,69	0/1:7,21:29:1.49:728,0,1	0/0:8,0:19:19.89:0,20,98	0/1:23,2:26:29.12:29,0,351	0/0:28,0:33:55.84:0,56,579	0/0:17,0:19:38.40:0,38,366
chr10	72729694	.	C	CA	4471.97	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.402;DP=724;FS=0.788;HRun=3;HaplotypeScore=66.4860;InbreedingCoeff=0.9999;MQ=86.71;MQ0=0;MQRankSum=-1.572;QD=34.94;ReadPosRankSum=3.072;VQSLOD=5.4938;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,135,1558	0/0:13,0:13:36.11:0,36,432	0/0:21,0:21:48.15:0,48,649	0/0:27,0:27:69.67:0,70,836	0/0:18,0:18:48.13:0,48,565	0/0:18,0:18:51.16:0,51,612	0/0:14,0:14:36.11:0,36,432	0/0:40,0:40:99:0,102,1206	0/0:21,0:21:63.17:0,63,741	0/0:17,0:17:48.15:0,48,576	0/0:17,0:17:48.14:0,48,563	1/1:1,27:28:69.23:966,69,0	1/1:0,25:25:66.22:923,66,0	0/0:29,0:29:81.21:0,81,947	0/0:36,0:36:99:0,105,1259	0/0:23,0:23:60.18:0,60,718	0/0:26,0:26:75.23:0,75,896	0/0:27,0:27:75.20:0,75,886	0/0:27,0:27:75.21:0,75,886	0/0:29,0:29:81.21:0,81,937	0/0:40,0:40:99:0,111,1331	1/1:4,21:25:57.19:798,57,0	1/1:1,19:20:54.14:734,54,0	1/1:2,28:30:75.25:1050,75,0	0/0:21,0:21:60.17:0,60,710	0/0:30,0:30:87.25:0,87,1033	0/0:29,0:29:84.24:0,84,995	0/0:25,0:25:75.23:0,75,899
chr10	72730784	.	TA	T	272	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.982;DP=596;FS=0.000;HRun=7;HaplotypeScore=55.4563;InbreedingCoeff=0.8731;MQ=75.96;MQ0=0;MQRankSum=-1.376;QD=16.00;ReadPosRankSum=0.038;VQSLOD=3.2146;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.12:0,78,931	0/0:8,0:8:24.05:0,24,286	0/0:15,0:15:42.09:0,42,480	0/0:7,0:8:4.64:0,5,63	0/0:31,0:31:81.25:0,81,1006	0/0:18,0:18:51.16:0,51,630	0/0:8,0:8:18:0,18,208	0/0:44,0:44:99:0,108,1327	0/0:21,0:21:60.17:0,60,730	0/0:32,0:32:96.30:0,96,1199	0/0:22,0:22:63.20:0,63,792	0/0:17,0:17:51.16:0,51,641	0/0:19,0:19:57.18:0,57,714	0/0:21,0:21:60.18:0,60,743	0/0:34,0:34:99:0,99,1246	0/0:20,0:20:60.16:0,60,720	0/0:18,0:18:54.16:0,54,667	1/1:1,16:17:36.08:367,36,0	0/0:16,0:16:39.12:0,39,475	0/0:28,0:28:78.23:0,78,951	0/0:13,0:13:33.09:0,33,401	0/0:14,0:14:36.12:0,36,453	0/0:11,0:11:30.10:0,30,377	0/0:22,0:22:66.19:0,66,806	0/0:25,0:25:75.24:0,75,943	0/0:33,0:33:81.26:0,81,1019	0/0:36,0:36:99:0,105,1307	0/0:16,0:16:48.15:0,48,603
chr10	72735677	.	A	AACAC	13523.67	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-14.952;DP=586;FS=1.092;HRun=0;HaplotypeScore=84.6905;InbreedingCoeff=0.9319;MQ=89.02;MQ0=3;MQRankSum=-4.609;QD=59.31;ReadPosRankSum=4.504;VQSLOD=6.3337;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,34:39:81.28:2137,81,0	0/0:1,0:1:3.01:0,3,57	0/0:22,0:22:54.16:0,54,914	0/0:23,0:23:54.62:0,55,922	0/0:13,0:13:33.10:0,33,593	0/0:23,0:23:69.22:0,69,1277	0/0:32,0:32:93.31:0,93,1734	0/0:28,0:28:72.21:0,72,1227	0/0:28,0:28:84.26:0,84,1530	1/1:1,18:19:54.17:1328,54,0	1/1:1,5:6:7.58:165,8,0	1/1:2,14:15:39.13:1013,39,0	1/1:0,18:20:45.15:1202,45,0	0/0:22,0:22:66.22:0,66,1211	0/0:24,0:24:69.22:0,69,1278	0/0:25,0:25:75.21:0,75,1387	1/1:2,33:35:87.30:2334,87,0	1/1:3,27:29:69.24:1834,69,0	0/0:17,0:17:42.12:0,42,729	0/0:8,0:8:16.73:0,17,392	0/0:46,0:46:99:0,129,2361	1/1:0,6:6:11.93:231,12,0	1/1:0,9:9:24.08:636,24,0	1/1:3,34:37:81.28:2185,81,0	1/1:1,6:9:18.06:458,18,0	0/0:23,0:23:69.22:0,69,1249	0/0:22,0:22:63.17:0,63,1072	0/0:1,0:1:3.01:0,3,57
chr10	72735984	.	TACACACACACACACACACAC	T	803.74	PASS	AB=0.880;AC=10;AF=0.200;AN=50;BaseQRankSum=2.550;DP=569;FS=0.000;HRun=0;HaplotypeScore=248.5265;InbreedingCoeff=0.5591;MQ=69.66;MQ0=14;MQRankSum=-0.771;QD=5.66;ReadPosRankSum=1.616;VQSLOD=2.4905;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:43:8.50:277,0,9	0/0:10,0:10:15.05:0,15,792	./.	./.	0/0:16,0:16:15.05:0,15,1094	0/0:22,0:21:24.08:0,24,1356	0/0:23,0:23:27.54:0,28,1167	0/0:14,0:14:3.01:0,3,95	0/0:15,0:16:21.07:0,21,1527	0/0:25,0:25:39.49:0,39,2554	./.	1/1:16,3:18:3.01:125,3,0	1/1:14,4:18:3.01:158,3,0	0/0:10,0:10:9.03:0,9,719	0/0:14,0:14:9.03:0,9,587	0/0:15,0:15:12.04:0,12,542	0/0:23,0:22:25.71:0,26,1332	0/0:13,0:12:15.05:0,15,1019	0/0:10,0:10:7.58:0,8,158	0/0:15,0:14:18.06:0,18,1461	0/0:35,0:33:27.09:0,27,1822	0/1:16,3:19:0:0,0,0	1/1:14,0:13:3.01:46,3,0	1/1:29,0:29:9.03:325,9,0	0/0:17,0:17:12.04:0,12,593	0/0:21,0:21:26.57:0,27,1787	0/0:28,0:27:36.12:0,36,2427	0/0:4,0:4:3.01:0,3,270
chr10	72737864	.	A	AT	1140.91	PASS	AB=0.923;AC=5;AF=0.089;AN=56;BaseQRankSum=-8.748;DP=518;FS=0.000;HRun=9;HaplotypeScore=46.3331;InbreedingCoeff=0.8136;MQ=71.02;MQ0=0;MQRankSum=-1.442;QD=18.70;ReadPosRankSum=-0.066;VQSLOD=3.3644;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,37:39:90.24:996,90,0	0/0:2,0:2:6:0,6,52	0/0:5,0:5:15:0,15,130	0/0:17,0:16:23.94:0,24,204	0/0:26,0:26:62.97:0,63,545	0/0:18,0:18:41.98:0,42,365	0/0:17,0:17:44.92:0,45,378	0/0:29,0:29:68.95:0,69,598	0/0:21,0:21:53.98:0,54,468	0/0:22,0:22:62.99:0,63,547	0/0:19,1:21:19.84:0,20,390	0/0:16,0:16:35.97:0,36,309	0/0:15,0:15:32.95:0,33,282	0/0:15,0:15:38.99:0,39,339	0/0:21,0:21:53.97:0,54,468	0/0:19,0:19:50.99:0,51,443	0/0:26,0:26:77.92:0,78,664	1/1:0,9:9:24.06:265,24,0	0/1:10,1:12:1.17:1,0,204	0/0:20,0:20:47.97:0,48,415	0/0:29,1:31:43.93:0,44,598	0/0:11,0:11:26.98:0,27,234	0/0:17,0:17:41.98:0,42,362	0/0:16,0:16:41.95:0,42,358	0/0:18,0:18:47.95:0,48,410	0/0:20,0:20:56.98:0,57,495	0/0:20,0:20:47.95:0,48,412	0/0:14,0:14:35.97:0,36,312
chr10	72741582	.	A	ACGAC	1120.44	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=2.586;DP=794;FS=4.490;HRun=0;HaplotypeScore=135.8668;InbreedingCoeff=0.6456;MQ=78.09;MQ0=1;MQRankSum=-2.460;QD=23.84;ReadPosRankSum=2.075;VQSLOD=3.6177;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:99:302,0,223	0/0:11,0:11:33.11:0,33,678	0/0:29,0:29:70.32:0,70,1163	0/0:29,0:29:57.32:0,57,1037	0/0:31,0:31:90.24:0,90,1636	0/0:32,0:32:96.23:0,96,1665	0/0:22,0:22:63.20:0,63,1195	0/0:26,0:26:78.22:0,78,1283	0/0:34,0:34:99:0,99,1687	0/0:43,0:43:99:0,120,2284	0/0:25,0:24:75.18:0,75,1319	0/0:25,0:25:60.13:0,60,998	0/0:29,0:29:54.16:0,54,998	0/0:32,0:32:93.19:0,93,1535	0/0:40,0:40:99:0,111,2141	0/0:28,0:28:84.23:0,84,1569	0/0:33,0:33:99:0,99,1715	1/1:2,19:22:33.11:925,33,0	0/0:24,0:24:69.22:0,69,1249	0/0:29,0:29:87.21:0,87,1553	0/0:45,0:45:99:0,132,2284	0/0:25,0:25:72.18:0,72,1301	0/0:28,0:28:62.62:0,63,1108	0/0:21,0:21:45.14:0,45,821	0/0:34,0:34:99:0,102,1861	0/0:27,0:27:81.24:0,81,1521	0/0:38,0:38:99:0,108,1827	0/0:7,0:6:21.05:0,21,399
chr10	72741594	.	C	CTGAA	1391.01	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.337;DP=802;FS=0.747;HRun=0;HaplotypeScore=136.2809;InbreedingCoeff=0.9871;MQ=72.32;MQ0=1;MQRankSum=-0.186;QD=27.27;ReadPosRankSum=3.586;VQSLOD=3.7596;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,20:27:27.16:1017,27,0	0/0:11,0:11:30.10:0,30,499	0/0:24,0:24:27.01:0,27,350	0/0:30,0:29:33.06:0,33,452	0/0:29,0:29:60.19:0,60,973	0/0:33,0:33:63.19:0,63,999	0/0:27,0:27:63.13:0,63,898	0/0:30,0:30:54.11:0,54,696	0/0:30,0:30:50.94:0,51,779	0/0:44,0:44:99:0,117,1763	0/0:22,0:21:54.17:0,54,872	0/0:25,0:25:42.06:0,42,662	0/0:27,0:27:47.87:0,48,646	0/0:30,0:30:63.11:0,63,890	0/0:41,0:41:99:0,99,1524	0/0:27,0:27:66.21:0,66,1073	0/0:32,0:32:78.24:0,78,1255	1/1:24,0:23:14.14:491,14,0	0/0:30,0:30:75.16:0,75,1021	0/0:26,0:26:63.22:0,63,1035	0/0:48,0:48:99:0,114,1638	0/0:27,0:28:49.97:0,50,780	0/0:26,0:26:38.49:0,38,640	0/0:21,0:21:30.10:0,30,498	0/0:32,0:32:72.15:0,72,1066	0/0:35,0:35:81.19:0,81,1138	0/0:35,0:35:75.08:0,75,1144	0/0:8,0:8:24.04:0,24,346
chr10	72741654	.	TGTTGTG	T	4421.99	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.359;DP=753;FS=1.483;HRun=0;HaplotypeScore=170.1217;InbreedingCoeff=0.9998;MQ=66.93;MQ0=5;MQRankSum=-11.321;QD=37.79;ReadPosRankSum=1.194;VQSLOD=4.8242;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:87.21:0,87,2645	0/0:12,0:12:33.09:0,33,902	0/0:34,0:26:57.39:0,57,1284	0/0:31,0:27:52.47:0,52,1689	0/0:25,0:25:69.21:0,69,2143	0/0:29,0:29:78.25:0,78,2398	0/0:22,0:22:57.16:0,57,1683	0/0:35,0:35:90.25:0,90,2393	0/0:22,0:22:63.21:0,63,1993	0/0:38,0:38:99:0,105,3198	0/0:20,0:20:54.18:0,54,1598	1/1:0,18:18:38.96:838,39,0	1/1:0,29:29:51.18:1158,51,0	0/0:19,0:19:54.16:0,54,1590	0/0:24,0:24:66.22:0,66,2071	0/0:22,0:22:63.20:0,63,2023	0/0:42,0:42:99:0,120,3689	0/0:20,0:20:36.33:0,36,1434	0/0:24,0:24:63.15:0,63,1733	0/0:21,0:21:57.11:0,57,1394	0/0:50,0:50:99:0,132,3969	1/1:5,19:24:56.94:1057,57,0	1/1:1,21:22:32.63:745,33,0	1/1:3,21:24:32.98:624,33,0	0/0:31,0:31:87.23:0,87,2444	0/0:31,0:31:84.27:0,84,2709	0/0:32,0:32:93.27:0,93,2815	0/0:13,0:13:39.12:0,39,1286
chr10	72744585	.	AC	A	1828.43	PASS	AB=0.974;AC=21;AF=0.375;AN=56;BaseQRankSum=2.033;DP=432;FS=4.350;HRun=11;HaplotypeScore=67.3232;InbreedingCoeff=0.4643;MQ=74.69;MQ0=3;MQRankSum=0.047;QD=7.71;ReadPosRankSum=3.121;VQSLOD=2.3319;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:26:74.91:76,0,75	0/0:5,0:5:9.01:0,9,88	0/0:29,0:17:25.93:0,26,201	0/0:15,0:11:19.95:0,20,168	0/1:18,0:18:0.52:1,0,172	0/1:15,2:17:3.62:4,0,153	0/0:20,0:20:37.62:0,38,356	0/0:17,1:18:2.41:0,2,214	0/0:13,1:14:8.43:0,8,284	0/1:17,0:17:11.29:11,0,56	0/1:24,1:25:34.66:78,0,35	1/1:4,11:15:35.73:281,36,0	1/1:4,13:17:38.93:319,39,0	0/0:11,0:11:15.04:0,15,158	0/0:11,0:11:23.80:0,24,214	1/1:6,2:8:15.71:115,16,0	0/0:18,0:18:13.34:0,13,114	1/1:1,9:10:26.77:217,27,0	0/1:8,0:13:0.23:0,0,93	0/0:12,0:13:5.83:0,6,34	0/0:5,0:5:10.75:0,11,69	1/1:2,14:16:41.78:327,42,0	1/1:6,21:27:45.76:369,46,0	1/1:1,11:12:20.97:172,21,0	0/1:16,0:16:47.32:47,0,67	0/0:9,0:13:22.33:0,22,149	0/0:7,0:18:8.42:0,8,43	0/0:1,0:5:5.82:0,6,35
chr10	72746308	.	TAAA	T	349.43	PASS	AB=0.548;AC=1;AF=0.018;AN=56;BaseQRankSum=4.628;DP=586;FS=0.000;HRun=7;HaplotypeScore=78.5782;InbreedingCoeff=0.1854;MQ=54.84;MQ0=10;MQRankSum=0.922;QD=20.55;ReadPosRankSum=1.839;VQSLOD=0.1074;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.22:0,81,1466	0/0:9,0:9:24.07:0,24,494	0/0:25,0:12:33.11:0,33,442	0/0:30,0:17:42.13:0,42,658	0/0:25,0:25:72.23:0,72,1388	0/0:24,0:24:72.24:0,72,1403	0/0:24,0:24:60.20:0,60,1064	0/0:43,0:42:99:0,120,1990	0/0:19,0:19:57.18:0,57,1127	0/0:26,0:26:69.24:0,69,1414	0/0:23,0:23:66.22:0,66,1351	0/0:16,0:16:45.11:0,45,944	0/0:12,0:12:36.12:0,36,699	0/0:17,0:17:48.16:0,48,943	0/0:18,0:19:57.17:0,57,1102	0/0:17,0:17:48.16:0,48,970	0/0:26,0:26:65.16:0,65,1263	0/1:3,14:17:8.80:424,0,9	0/0:24,0:18:48.15:0,48,820	0/0:25,0:25:72.23:0,72,1315	0/0:10,0:9:30.09:0,30,575	0/0:15,0:15:42.13:0,42,798	0/0:13,0:13:39.13:0,39,746	0/0:23,0:23:69.23:0,69,1338	0/0:16,0:16:45.15:0,45,894	0/0:25,0:25:72.24:0,72,1411	0/0:29,0:28:87.27:0,87,1658	0/0:5,0:5:15.05:0,15,285
chr10	72746553	.	TTG	T	1350.58	PASS	AB=0.913;AC=14;AF=0.259;AN=54;BaseQRankSum=5.200;DP=650;FS=0.000;HRun=0;HaplotypeScore=114.7520;InbreedingCoeff=0.4754;MQ=66.55;MQ0=10;MQRankSum=1.396;QD=6.34;ReadPosRankSum=2.329;VQSLOD=3.1666;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:20:2.84:14,3,0	0/0:10,2:12:15.03:0,15,203	./.	0/0:23,0:11:0:0,0,0	0/0:25,1:25:1.42:0,1,537	0/1:25,3:27:41.56:42,0,682	0/0:21,0:22:28:0,28,560	0/0:25,0:25:25.41:0,25,333	0/1:24,0:23:36.73:37,0,294	0/0:20,0:21:38.43:0,38,361	0/0:19,0:20:15.01:0,15,156	1/1:9,15:24:32.96:371,33,0	1/1:12,14:25:32.93:368,33,0	0/0:17,1:18:11.09:0,11,542	0/1:30,0:30:95.49:95,0,544	0/0:24,0:24:51.13:0,51,719	0/0:23,0:23:27.92:0,28,188	0/0:12,0:14:10.58:0,11,50	0/0:17,0:16:9.03:0,9,121	0/0:23,1:24:2.18:0,2,436	0/0:44,0:43:71.82:0,72,980	0/1:10,5:15:12.42:66,0,12	1/1:10,12:22:21.01:223,21,0	1/1:8,16:24:27.08:305,27,0	0/0:22,0:31:10.21:0,10,79	0/0:24,0:24:30.10:0,30,447	0/0:27,1:29:29.64:0,30,887	0/0:14,0:15:12.81:0,13,295
chr10	72746591	.	A	ATG	785.34	PASS	AB=0.611;AC=7;AF=0.125;AN=56;BaseQRankSum=1.428;DP=654;FS=4.230;HRun=0;HaplotypeScore=119.9539;InbreedingCoeff=0.7987;MQ=57.36;MQ0=10;MQRankSum=-1.942;QD=8.82;ReadPosRankSum=-0.017;VQSLOD=2.8682;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:30.05:0,30,366	0/0:10,0:10:18.06:0,18,220	0/0:30,0:12:30.04:0,30,348	0/0:33,0:14:32.84:0,33,372	0/0:26,0:26:41.90:0,42,460	0/0:30,0:29:56.61:0,57,620	0/0:19,0:19:42.13:0,42,513	0/0:23,0:25:41.23:0,41,459	0/0:16,0:16:17.79:0,18,220	1/1:6,10:17:36.44:520,36,0	0/1:8,13:20:24.62:134,0,25	0/0:24,0:25:47.34:0,47,534	0/0:23,0:25:43.69:0,44,483	0/0:19,0:20:38.75:0,39,438	0/0:23,0:24:47.96:0,48,546	0/0:30,0:31:68.70:0,69,807	1/1:12,13:26:14.66:170,15,0	0/0:18,0:18:19.13:0,19,284	0/0:15,0:15:26.09:0,26,349	0/0:19,0:19:42.13:0,42,512	0/0:37,0:40:75.04:0,75,881	0/0:20,0:20:36.11:0,36,438	0/0:22,0:21:32.59:0,33,360	0/0:33,0:33:60.17:0,60,719	1/1:14,10:24:8.05:103,8,0	0/0:19,0:19:41.49:0,41,484	0/0:28,0:28:63.20:0,63,769	0/0:15,0:15:36.11:0,36,435
chr10	72746887	.	GGT	G	734.76	PASS	AB=0.933;AC=25;AF=0.521;AN=48;BaseQRankSum=5.997;DP=511;FS=4.424;HRun=0;HaplotypeScore=69.3068;InbreedingCoeff=0.3949;MQ=65.62;MQ0=9;MQRankSum=0.073;QD=2.67;ReadPosRankSum=1.850;VQSLOD=1.4922;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:21:5.64:27,6,0	0/0:9,0:9:9.02:0,9,111	./.	./.	0/1:24,0:24:14:14,0,37	0/1:21,2:23:49.45:49,0,95	0/0:16,0:14:12.02:0,12,157	0/0:27,0:27:5.94:0,6,41	0/1:15,4:19:2.18:2,0,318	1/1:20,0:23:8.52:42,9,0	./.	1/1:6,3:10:8.86:78,9,0	1/1:16,11:27:21.04:226,21,0	0/0:10,0:10:6:0,6,68	0/0:22,0:21:15.03:0,15,201	0/0:18,0:18:18.03:0,18,223	1/1:23,0:23:5.80:34,6,0	1/1:12,2:13:3:32,3,0	./.	0/0:16,0:16:3:0,3,25	0/0:30,0:30:9.01:0,9,105	1/1:11,1:13:5.85:46,6,0	1/1:8,3:11:9.02:97,9,0	1/1:13,8:19:15.04:161,15,0	1/1:11,0:15:5.68:28,6,0	0/0:25,0:23:12.03:0,12,142	0/1:20,2:22:46.45:46,0,105	0/1:7,0:7:20.23:20,0,85
chr10	72750556	.	C	CA	469.93	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-5.076;DP=375;FS=16.182;HRun=9;HaplotypeScore=34.3195;InbreedingCoeff=0.7327;MQ=70.48;MQ0=0;MQRankSum=0.396;QD=16.20;ReadPosRankSum=0.226;VQSLOD=1.9311;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:56.98:0,57,495	0/0:10,0:10:23.99:0,24,208	0/0:6,1:7:8.97:0,9,73	0/1:4,0:4:1.62:2,0,3	0/0:16,0:16:47.99:0,48,416	0/0:19,0:19:47.96:0,48,413	0/0:6,0:6:18:0,18,156	0/0:25,0:24:62.98:0,63,547	0/0:8,0:8:24:0,24,208	0/0:18,0:18:44.98:0,45,391	0/0:15,0:15:41.99:0,42,365	0/0:9,0:9:21:0,21,182	0/0:8,0:8:20.98:0,21,182	0/0:5,0:5:15:0,15,130	0/0:11,0:11:32.99:0,33,287	0/0:3,0:3:8.98:0,9,75	0/0:16,0:16:47.99:0,48,417	1/1:1,24:25:51.14:564,51,0	0/0:20,0:21:46.96:0,47,388	0/0:11,0:11:29.99:0,30,260	0/0:7,0:7:21:0,21,182	0/0:5,0:5:15:0,15,130	0/0:5,0:5:15:0,15,130	0/0:7,0:7:21:0,21,182	0/0:16,0:17:47.02:0,47,394	0/0:34,0:34:86.97:0,87,752	0/0:26,0:26:62.98:0,63,547	0/0:15,0:15:32.43:0,32,285
chr10	72750914	.	A	AT	415.50	PASS	AB=0.794;AC=9;AF=0.161;AN=56;BaseQRankSum=-3.924;DP=372;FS=6.514;HRun=14;HaplotypeScore=45.6215;InbreedingCoeff=0.2532;MQ=69.86;MQ0=0;MQRankSum=0.877;QD=4.72;ReadPosRankSum=-0.407;VQSLOD=0.9277;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:28.40:0,28,179	0/0:6,0:6:11.80:0,12,77	0/0:12,0:8:8.78:0,9,56	0/0:8,0:6:8.40:0,8,57	0/1:11,0:11:27.82:28,0,74	0/0:14,1:16:5.15:0,5,152	0/1:8,1:10:12.55:13,0,49	0/0:22,1:24:10.94:0,11,191	0/0:10,0:10:20.62:0,21,134	0/0:12,0:12:23.57:0,24,154	0/0:7,0:7:13.85:0,14,82	0/1:2,10:12:1.28:110,0,1	1/1:4,12:16:11.20:219,11,0	0/0:15,0:15:29.42:0,29,192	0/0:19,0:19:23.48:0,23,154	0/0:17,0:18:43.39:0,43,275	0/0:19,0:19:40.40:0,40,256	0/0:15,2:17:0.17:0,0,127	0/0:11,0:14:17.19:0,17,103	0/0:5,0:6:13.85:0,14,83	0/0:11,0:11:14.59:0,15,96	0/0:2,3:5:2.88:0,3,19	1/1:1,2:5:5.63:40,6,0	0/1:5,8:14:14.68:122,0,15	0/0:15,0:15:20.29:0,20,133	0/0:23,0:24:34.39:0,34,217	0/1:18,2:20:21.99:22,0,126	0/0:7,0:7:5.87:0,6,38
chr10	72751478	.	AGTGT	A	1181.61	PASS	AB=0.858;AC=14;AF=0.292;AN=48;BaseQRankSum=6.503;DP=579;FS=2.519;HRun=0;HaplotypeScore=99.6207;InbreedingCoeff=0.6234;MQ=62.03;MQ0=23;MQRankSum=-0.854;QD=7.98;ReadPosRankSum=2.831;VQSLOD=2.5670;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:26.79:0,27,386	./.	./.	0/0:49,0:22:0.94:0,1,2	0/0:14,0:15:20.74:0,21,245	0/0:34,0:33:33.09:0,33,595	0/0:25,0:28:35.84:0,36,724	0/0:33,0:31:3.01:0,3,59	0/0:19,0:19:23.47:0,23,451	1/1:15,0:23:14.69:123,15,0	./.	1/1:14,7:20:20.43:284,20,0	1/1:10,8:18:24.54:354,25,0	0/0:27,0:27:33.03:0,33,677	0/1:21,0:22:9.48:9,0,476	0/0:11,0:11:18.05:0,18,303	0/1:15,0:21:9.34:72,0,9	0/0:10,0:8:6.02:0,6,136	0/0:24,0:24:20.64:0,21,237	0/0:3,0:3:3.01:0,3,61	0/0:42,0:42:35.69:0,36,489	1/1:6,1:7:3.01:38,3,0	1/1:1,2:3:6.02:93,6,0	1/1:19,11:30:24.08:372,24,0	./.	0/0:21,0:21:29.99:0,30,393	0/0:20,0:20:29.71:0,30,445	0/0:8,0:8:3.01:0,3,37
chr10	72751733	.	G	GT	6237.23	PASS	AB=0.753;AC=54;AF=0.964;AN=56;BaseQRankSum=3.192;DP=309;FS=0.000;HRun=0;HaplotypeScore=115.9284;InbreedingCoeff=-0.0593;MQ=50.08;MQ0=0;MQRankSum=-1.953;QD=20.19;ReadPosRankSum=3.928;VQSLOD=6.4325;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,10:13:26.98:230,27,0	1/1:1,6:7:18.01:165,18,0	0/1:7,5:12:11.24:235,0,11	0/1:6,2:8:55.86:58,0,56	1/1:4,13:17:35.49:317,35,0	1/1:0,12:12:36.02:334,36,0	1/1:2,3:5:12.02:137,12,0	1/1:11,22:33:83.72:827,84,0	1/1:0,4:4:12.01:111,12,0	1/1:2,15:17:50.61:476,51,0	1/1:1,10:11:21:189,21,0	1/1:1,5:6:8.37:60,8,0	1/1:0,6:6:12:114,12,0	1/1:0,4:4:9:83,9,0	1/1:1,13:14:36:324,36,0	1/1:0,8:8:15:130,15,0	1/1:1,8:9:17.97:154,18,0	1/1:1,8:10:29.40:270,29,0	1/1:8,18:25:63.47:585,63,0	1/1:1,9:10:15:135,15,0	1/1:2,8:10:10.17:107,10,0	1/1:3,7:10:13.87:100,14,0	1/1:3,6:9:8.38:66,8,0	1/1:1,6:7:4.12:29,4,0	1/1:2,5:6:11.50:94,12,0	1/1:1,16:17:50.53:476,51,0	1/1:1,13:14:38.96:349,39,0	1/1:0,3:3:9:80,9,0
chr10	72751734	.	G	GT	5693.34	PASS	AB=0.781;AC=54;AF=0.964;AN=56;BaseQRankSum=4.462;DP=325;FS=2.574;HRun=0;HaplotypeScore=129.5656;InbreedingCoeff=-0.0664;MQ=48.36;MQ0=0;MQRankSum=-1.817;QD=17.52;ReadPosRankSum=4.726;VQSLOD=7.1177;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,10:14:26.98:230,27,0	1/1:2,6:8:15.48:139,15,0	0/1:6,5:11:25.50:191,0,25	0/1:6,1:7:18.97:19,0,73	1/1:4,13:17:27.46:239,27,0	1/1:0,12:12:36.02:334,36,0	1/1:4,3:7:9.01:92,9,0	1/1:13,22:35:72.28:780,72,0	1/1:0,4:4:12.01:111,12,0	1/1:5,15:20:53.93:451,54,0	1/1:1,10:11:21:190,21,0	1/1:1,5:6:6.47:53,6,0	1/1:0,6:6:12:114,12,0	1/1:0,4:4:9:83,9,0	1/1:3,13:16:36.01:324,36,0	1/1:0,8:8:15:130,15,0	1/1:0,8:8:14.99:132,15,0	1/1:2,9:11:30.03:283,30,0	1/1:8,18:25:40.30:495,40,0	1/1:1,9:10:12.48:112,12,0	1/1:1,7:9:1.67:67,2,0	1/1:3,7:10:9.94:86,10,0	1/1:3,6:9:6.48:60,6,0	1/1:1,6:7:1.73:23,2,0	1/1:5,5:9:9.48:86,9,0	1/1:1,16:17:47.52:436,48,0	1/1:3,12:16:38.54:313,39,0	1/1:3,3:6:14.94:120,15,0
chr10	72751761	.	A	AT	9246.57	PASS	AB=0.889;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.081;DP=261;FS=8.622;HRun=2;HaplotypeScore=93.8967;InbreedingCoeff=0.4153;MQ=52.52;MQ0=0;MQRankSum=-3.127;QD=36.55;ReadPosRankSum=1.717;VQSLOD=4.9487;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:29.97:405,30,0	1/1:1,3:4:12.03:154,12,0	0/0:6,0:5:1.75:0,2,8	0/1:7,0:4:0.97:1,0,86	1/1:2,16:18:51.03:663,51,0	1/1:1,10:11:30.10:427,30,0	1/1:0,3:3:9.03:129,9,0	1/1:5,33:37:99:1441,102,0	1/1:0,2:2:6.02:86,6,0	1/1:4,16:20:60.17:799,60,0	1/1:1,6:7:18.06:252,18,0	1/1:0,2:2:6.02:86,6,0	1/1:3,4:7:15.04:197,15,0	1/1:1,2:3:6.02:86,6,0	1/1:1,8:9:26.94:319,27,0	1/1:1,8:9:24.08:345,24,0	1/1:0,7:7:18.06:256,18,0	1/1:1,7:8:24.08:345,24,0	1/1:5,14:18:48.15:666,48,0	1/1:1,4:5:15.04:197,15,0	1/1:2,0:2:5.99:50,6,0	1/1:0,1:1:3.01:43,3,0	1/1:1,1:2:3.01:43,3,0	0/0:1,1:1:0.47:0,0,1	1/1:3,14:16:45.14:624,45,0	1/1:1,9:10:27.09:387,27,0	1/1:0,22:22:66.22:945,66,0	1/1:0,7:7:21.07:301,21,0
chr10	72751770	.	A	AT	8690.19	PASS	AB=0.750;AC=49;AF=0.907;AN=54;BaseQRankSum=-0.703;DP=266;FS=2.169;HRun=3;HaplotypeScore=87.7349;InbreedingCoeff=0.3715;MQ=58.70;MQ0=0;MQRankSum=-2.484;QD=34.21;ReadPosRankSum=2.174;VQSLOD=5.4071;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:14:30.10:417,30,0	1/1:0,3:3:8.98:102,9,0	0/1:4,2:5:23.70:35,0,24	0/0:8,0:5:5.78:0,6,44	1/1:2,17:19:48.05:641,48,0	1/1:1,11:12:27.02:352,27,0	1/1:1,2:3:9.01:107,9,0	1/1:8,33:40:99:1343,102,0	1/1:0,2:2:6.02:83,6,0	1/1:2,16:18:51.08:651,51,0	1/1:4,4:8:20.94:245,21,0	1/1:0,2:2:6.02:83,6,0	1/1:2,4:6:12.04:168,12,0	1/1:0,2:2:6.02:83,6,0	1/1:1,6:7:21:268,21,0	1/1:1,8:9:24.08:335,24,0	1/1:0,8:8:18.06:246,18,0	1/1:0,8:8:24.08:335,24,0	1/1:3,17:20:51.17:710,51,0	1/1:1,5:6:17.99:227,18,0	./.	1/1:0,1:1:3.01:42,3,0	1/1:0,2:2:6.02:84,6,0	0/0:1,1:1:0.47:0,0,1	1/1:0,17:16:45.15:627,45,0	1/1:2,7:9:24.07:317,24,0	1/1:4,20:24:66.20:900,66,0	1/1:0,7:7:21.07:287,21,0
chr10	72751833	.	AATAAT	A	349.39	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=2.163;DP=310;FS=1.538;HRun=0;HaplotypeScore=73.9339;InbreedingCoeff=0.7816;MQ=69.70;MQ0=0;MQRankSum=0.609;QD=49.91;ReadPosRankSum=3.108;VQSLOD=3.9416;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:48.16:0,48,1452	0/0:5,0:5:15.05:0,15,465	0/0:4,0:3:6.02:0,6,144	0/0:9,0:8:18.05:0,18,353	0/0:23,0:23:57.20:0,57,1728	0/0:13,0:13:33.11:0,33,1008	0/0:8,0:8:24.08:0,24,732	0/0:29,0:29:81.28:0,81,2466	0/0:3,0:3:9.03:0,9,277	0/0:18,0:18:51.18:0,51,1581	0/0:7,0:7:21.07:0,21,585	0/0:6,0:6:18.06:0,18,556	0/0:9,0:9:21.07:0,21,651	0/0:8,0:8:24.08:0,24,729	0/0:8,0:8:24.08:0,24,744	0/0:14,0:14:39.13:0,39,1205	0/0:12,0:12:33.11:0,33,1010	1/1:0,7:7:21.07:441,21,0	0/0:26,0:26:72.25:0,72,2216	0/0:6,0:6:18.06:0,18,515	0/0:7,0:7:21.07:0,21,636	./.	0/0:5,0:5:15.05:0,15,439	0/0:5,0:4:12.04:0,12,357	0/0:20,0:20:48.16:0,48,1465	0/0:13,0:13:39.13:0,39,1165	0/0:22,0:22:60.21:0,60,1852	./.
chr10	72752119	.	T	TA	340.04	PASS	AB=1.000;AC=5;AF=0.093;AN=54;BaseQRankSum=-3.273;DP=328;FS=1.963;HRun=10;HaplotypeScore=40.6735;InbreedingCoeff=0.5307;MQ=72.07;MQ0=2;MQRankSum=-0.821;QD=8.29;ReadPosRankSum=-1.680;VQSLOD=0.8575;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:36.09:382,36,0	0/0:7,0:7:17.97:0,18,148	0/0:12,0:7:7.43:0,7,44	0/0:7,0:5:5.59:0,6,35	0/0:20,0:20:53.91:0,54,438	0/0:21,0:22:55.95:0,56,446	0/0:5,0:5:14.88:0,15,109	0/0:25,0:25:68.37:0,68,544	0/0:3,0:3:8.99:0,9,74	0/0:14,0:14:14.61:0,15,43	1/1:8,0:8:2.08:62,2,0	0/0:8,0:8:14.97:0,15,123	0/0:9,0:9:17.98:0,18,148	0/0:12,0:12:32.80:0,33,252	0/0:10,0:10:26.95:0,27,218	0/0:13,0:13:38.95:0,39,318	0/0:26,0:26:40.12:0,40,119	0/1:15,0:15:10.41:10,0,41	0/0:17,0:17:35.93:0,36,295	0/0:3,0:3:8.98:0,9,72	0/0:10,0:10:23.96:0,24,194	./.	0/0:3,0:3:8.97:0,9,70	0/0:7,0:7:11.94:0,12,93	0/0:22,0:22:8.85:0,9,56	0/0:10,0:10:23.97:0,24,197	0/0:14,0:15:40.99:0,41,326	0/0:5,0:5:14.98:0,15,123
chr10	72754255	.	T	TGTGAC	804.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.167;DP=596;FS=0.000;HRun=0;HaplotypeScore=105.2530;InbreedingCoeff=0.9404;MQ=75.07;MQ0=0;MQRankSum=-2.327;QD=73.14;ReadPosRankSum=0.060;VQSLOD=5.1522;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.24:0,75,1632	0/0:7,0:7:21.07:0,21,489	0/0:17,0:17:51.11:0,51,1038	0/0:15,0:15:39.11:0,39,873	0/0:25,0:25:68.94:0,69,1607	0/0:20,0:20:57.20:0,57,1328	0/0:16,0:16:45.15:0,45,1028	0/0:38,0:38:99:0,111,2513	0/0:19,0:19:51.17:0,51,1148	0/0:21,0:21:63.21:0,63,1404	0/0:27,0:27:78.27:0,78,1789	0/0:22,0:22:66.21:0,66,1472	0/0:19,0:19:48.15:0,48,1074	0/0:22,0:22:66.21:0,66,1489	0/0:25,0:25:66.23:0,66,1494	0/0:17,0:17:51.18:0,51,1189	0/0:27,0:27:69.24:0,69,1601	1/1:3,7:11:27.09:899,27,0	0/0:24,0:24:69.23:0,69,1497	0/0:38,0:38:99:0,108,2517	0/0:13,0:13:39.13:0,39,909	0/0:15,0:15:36.10:0,36,750	0/0:25,0:25:69.24:0,69,1608	0/0:18,0:18:51.17:0,51,1164	0/0:24,0:24:72.23:0,72,1629	0/0:31,0:31:93.31:0,93,2120	0/0:30,0:30:72.25:0,72,1644	0/0:3,0:3:9.03:0,9,210
chr10	72755298	.	G	GTAAATAAATAAATAAA	1850.14	PASS	AC=10;AF=0.238;AN=42;BaseQRankSum=-1.183;DP=292;FS=0.000;HRun=0;HaplotypeScore=119.5505;InbreedingCoeff=0.7673;MQ=59.05;MQ0=0;MQRankSum=-3.390;QD=38.54;ReadPosRankSum=-1.816;VQSLOD=2.2924;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:13:12.03:0,12,125	0/0:8,0:8:15.05:0,15,658	./.	./.	0/0:16,0:16:39.13:0,39,1570	0/0:25,0:25:54.19:0,54,1949	0/0:7,0:7:6.02:0,6,76	0/0:29,0:29:24.08:0,24,854	0/0:8,0:8:9.03:0,9,395	./.	1/1:11,3:14:15.04:810,15,0	./.	1/1:7,0:7:3.01:75,3,0	0/0:7,0:7:6.02:0,6,264	0/0:9,0:9:9.02:0,9,231	0/0:11,0:11:21.07:0,21,821	1/1:12,2:13:12.04:542,12,0	1/1:1,0:1:3.01:42,3,0	0/0:9,0:9:21.04:0,21,582	0/0:18,0:18:15.02:0,15,363	0/0:8,0:8:6.02:0,6,178	./.	./.	./.	1/1:11,1:12:12.04:522,12,0	0/0:12,0:12:18.06:0,18,788	0/0:18,0:18:42.14:0,42,1720	0/0:12,0:12:36.12:0,36,1409
chr10	72755371	.	G	GTATC	1986.52	PASS	AB=0.963;AC=21;AF=0.420;AN=50;BaseQRankSum=-4.637;DP=375;FS=0.854;HRun=0;HaplotypeScore=76.2884;InbreedingCoeff=0.6362;MQ=63.64;MQ0=4;MQRankSum=0.580;QD=12.19;ReadPosRankSum=-0.903;VQSLOD=2.9640;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:15:24.02:0,24,220	0/0:8,0:8:15.05:0,15,228	./.	./.	0/0:17,0:17:24.08:0,24,365	0/0:25,0:25:36.11:0,36,519	0/0:8,0:9:4.26:0,4,49	0/1:33,0:33:0:0,0,0	0/0:11,0:11:18.03:0,18,230	1/1:7,9:16:24.08:539,24,0	1/1:8,6:14:18.06:418,18,0	1/1:8,0:8:6.02:122,6,0	1/1:11,0:11:9.03:152,9,0	0/0:10,0:10:18.05:0,18,253	0/0:13,0:14:15.04:0,15,210	0/0:14,0:15:18.04:0,18,236	1/1:5,7:12:18.06:387,18,0	1/1:4,0:4:5.04:32,5,0	0/0:8,0:7:3.01:0,3,46	0/1:13,1:14:51.58:52,0,206	0/0:8,0:8:21.07:0,21,319	./.	1/1:9,0:9:3.01:67,3,0	1/1:7,0:7:0.47:1,0,0	1/1:6,8:14:15.05:348,15,0	0/1:20,1:21:42.59:43,0,298	0/0:14,0:14:18.06:0,18,274	0/0:23,0:23:27.04:0,27,364
chr10	72755720	.	TG	T	760.21	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.095;DP=689;FS=12.278;HRun=3;HaplotypeScore=65.8333;InbreedingCoeff=0.9989;MQ=83.56;MQ0=0;MQRankSum=-3.926;QD=29.24;ReadPosRankSum=0.458;VQSLOD=2.1823;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:69.22:855,69,0	0/0:14,0:14:42.14:0,42,605	0/0:26,0:25:72.21:0,72,977	0/0:29,0:29:69.28:0,69,989	0/0:26,0:26:78.25:0,78,1104	0/0:24,0:24:72.24:0,72,1036	0/0:15,0:15:45.13:0,45,628	0/0:31,0:31:93.30:0,93,1323	0/0:32,0:32:90.30:0,90,1295	0/0:21,0:21:63.21:0,63,891	0/0:21,0:21:63.21:0,63,903	0/0:19,0:19:57.19:0,57,820	0/0:25,0:25:72.24:0,72,1036	0/0:31,0:31:87.28:0,87,1230	0/0:40,0:40:99:0,117,1646	0/0:26,0:26:75.25:0,75,1078	0/0:21,0:21:60.19:0,60,847	0/0:10,0:10:30.10:0,30,431	0/0:27,0:27:78.25:0,78,1103	0/0:35,0:35:99:0,102,1441	0/0:26,0:26:72.24:0,72,1037	0/0:36,0:36:99:0,105,1508	0/0:28,0:28:84.28:0,84,1201	0/0:23,0:23:69.21:0,69,974	0/0:19,0:19:54.18:0,54,777	0/0:24,0:24:72.23:0,72,1019	0/0:24,0:24:66.21:0,66,933	0/0:10,0:10:30.10:0,30,432
chr10	72757873	.	AT	A	4454.36	PASS	AB=0.933;AC=21;AF=0.375;AN=56;BaseQRankSum=12.585;DP=648;FS=0.673;HRun=10;HaplotypeScore=70.3381;InbreedingCoeff=0.9378;MQ=71.19;MQ0=0;MQRankSum=-1.536;QD=19.28;ReadPosRankSum=3.505;VQSLOD=5.6222;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,2:28:19.88:0,20,645	0/0:14,0:14:36.10:0,36,398	0/1:13,1:14:5.08:5,0,146	0/0:14,0:14:30.06:0,30,314	0/0:36,0:36:96.21:0,96,1028	0/0:30,0:30:66.63:0,67,714	0/0:25,0:25:66.16:0,66,720	0/0:34,0:34:87.19:0,87,932	0/0:26,0:27:78.02:0,78,829	1/1:5,23:28:71.97:625,72,0	1/1:1,21:22:50.97:443,51,0	1/1:2,20:22:56.99:495,57,0	1/1:4,16:20:41.97:365,42,0	0/0:19,1:20:57.15:0,57,631	0/0:18,0:19:29.07:0,29,490	0/0:22,2:24:34.07:0,34,592	1/1:3,18:21:56.97:491,57,0	1/1:9,0:9:17.48:103,17,0	0/0:22,2:24:17.16:0,17,614	0/0:32,0:32:81.21:0,81,889	0/0:22,0:22:60.16:0,60,664	1/1:2,24:26:59.97:521,60,0	1/1:4,21:25:56.98:495,57,0	1/1:3,20:23:34.19:422,34,0	1/1:2,19:21:56.98:492,57,0	0/0:28,0:28:84.23:0,84,929	0/0:27,0:27:81.21:0,81,887	0/0:13,0:13:39.11:0,39,431
chr10	72757937	.	C	CTT	685.29	PASS	AB=0.624;AC=9;AF=0.161;AN=56;BaseQRankSum=7.722;DP=521;FS=7.585;HRun=11;HaplotypeScore=92.8687;InbreedingCoeff=0.5757;MQ=79.30;MQ0=0;MQRankSum=-1.168;QD=5.76;ReadPosRankSum=-1.128;VQSLOD=-0.1346;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,13:21:33.01:407,33,0	0/0:6,0:6:15.02:0,15,145	0/0:19,0:20:30.73:0,31,231	0/0:12,0:12:2.50:0,2,53	0/0:22,0:23:34.31:0,34,329	0/0:18,0:18:38.80:0,39,345	0/0:17,0:20:47.18:0,47,400	0/0:21,0:22:47.77:0,48,440	0/0:22,0:22:66.11:0,66,640	1/1:10,0:23:12.32:129,12,0	0/1:10,0:18:20.85:66,0,21	0/0:21,0:21:38.90:0,39,378	0/0:22,0:22:51.03:0,51,494	0/0:13,0:14:29.71:0,30,274	0/0:24,0:25:56.82:0,57,582	0/0:22,0:22:57.06:0,57,547	0/1:9,0:29:33.24:109,0,33	0/1:3,0:10:7.67:33,0,8	0/0:18,0:18:38.96:0,39,372	0/0:27,0:28:37.34:0,37,539	0/0:9,0:9:17.99:0,18,175	0/0:22,0:22:38.80:0,39,360	0/0:4,0:5:14.94:0,15,133	0/0:17,0:17:39.02:0,39,378	1/1:13,0:18:18.91:97,19,0	0/0:18,0:18:32.92:0,33,314	0/0:18,0:20:50.69:0,51,464	0/0:15,0:18:44.43:0,44,391
chr10	72760470	.	TAC	T	162.34	PASS	AB=0.930;AC=11;AF=0.204;AN=54;BaseQRankSum=2.378;DP=552;FS=4.425;HRun=0;HaplotypeScore=82.4360;InbreedingCoeff=-0.1510;MQ=61.43;MQ0=5;MQRankSum=0.555;QD=0.82;ReadPosRankSum=1.493;VQSLOD=1.4316;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:16,16:34:2.57:93,0,3	0/0:5,0:5:9.01:0,9,114	0/0:25,0:19:0:0,0,0	0/0:24,0:19:6.02:0,6,82	0/1:13,0:14:35.63:36,0,108	0/1:13,0:13:18.20:18,0,101	0/0:26,2:28:21.46:0,21,281	0/0:21,0:21:2.99:0,3,24	0/0:18,0:17:11.76:0,12,154	0/0:14,0:24:39.94:0,40,300	0/0:15,0:14:13.30:0,13,116	0/1:15,0:15:0.08:0,0,0	0/0:13,0:14:9:0,9,81	0/0:20,0:20:26.80:0,27,247	0/1:29,1:31:53.27:53,0,539	0/1:16,0:18:6.67:7,0,232	0/0:40,0:40:37.16:0,37,288	0/0:12,0:11:12.38:0,12,86	0/1:16,0:16:14.14:14,0,76	0/1:14,0:13:20.76:21,0,90	0/0:31,0:32:2.33:0,2,243	0/0:14,0:13:5.99:0,6,49	0/0:13,0:13:5.98:0,6,48	0/0:26,0:25:2.98:0,3,22	./.	0/1:16,0:16:10.55:11,0,157	0/1:13,4:16:14.06:26,0,14	0/1:9,0:9:14.88:15,0,154
chr10	72760509	.	A	ACACACACACG	818.38	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=7.069;DP=717;FS=71.468;HRun=0;HaplotypeScore=195.5522;InbreedingCoeff=0.1498;MQ=55.10;MQ0=8;MQRankSum=-2.037;QD=2.77;ReadPosRankSum=-1.488;VQSLOD=0.0270;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:62.80:0,63,685	0/0:11,0:10:20.99:0,21,263	0/0:25,0:16:45.01:0,45,435	0/0:33,0:23:36.07:0,36,414	0/0:24,0:24:5.31:0,5,411	0/1:17,0:17:34.61:35,0,325	0/0:26,0:26:8.52:0,9,360	0/0:30,0:28:72.97:0,73,599	0/0:25,0:24:47.68:0,48,457	0/1:31,0:31:99:163,0,242	0/1:20,0:19:50.09:50,0,162	1/1:3,12:22:0.40:1,0,0	1/1:3,0:22:8.97:138,9,0	0/0:23,0:23:42.03:0,42,452	0/0:38,0:38:99:0,99,1331	0/0:18,0:18:38.10:0,38,521	0/1:42,0:42:99:180,0,340	0/1:15,0:14:99:116,0,174	0/1:17,0:16:13.23:13,0,213	0/0:27,0:26:62.72:0,63,511	0/0:41,0:40:26.64:0,27,508	1/1:3,0:23:3.01:98,3,0	1/1:1,16:23:3.36:157,3,0	1/1:7,25:39:0.47:1,0,0	0/0:30,0:29:35.89:0,36,287	0/0:28,0:28:74.39:0,74,595	0/1:11,0:11:6.55:7,0,155	0/1:11,0:11:13.46:13,0,307
chr10	72761069	.	AC	A	2589.72	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.750;DP=628;FS=1.880;HRun=7;HaplotypeScore=64.3648;InbreedingCoeff=0.9985;MQ=68.76;MQ0=0;MQRankSum=1.637;QD=23.33;ReadPosRankSum=3.171;VQSLOD=4.0288;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.16:0,69,833	0/0:7,0:7:21.06:0,21,252	0/0:23,0:19:35.94:0,36,409	0/0:25,0:20:26.70:0,27,280	0/0:34,0:34:96.27:0,96,1168	0/0:28,0:28:75.09:0,75,905	0/0:16,0:16:45.06:0,45,545	0/0:38,0:37:99:0,99,1245	0/0:21,0:21:60.16:0,60,729	0/0:29,0:29:75.20:0,75,908	0/0:28,0:28:63.17:0,63,757	1/1:2,18:20:45.10:456,45,0	1/1:1,18:19:54.12:551,54,0	0/0:16,0:16:42.13:0,42,517	0/0:21,0:21:63.16:0,63,759	0/0:19,0:19:54.16:0,54,667	0/0:22,0:22:57.16:0,57,700	0/0:23,0:23:57.13:0,57,698	0/0:18,0:18:48.14:0,48,590	0/0:28,0:28:72.21:0,72,876	0/0:10,0:10:27.09:0,27,339	1/1:2,24:26:66.07:651,66,0	1/1:2,27:29:71.19:709,71,0	1/1:3,14:17:39.09:398,39,0	0/0:24,0:24:63.16:0,63,765	0/0:18,0:18:48.13:0,48,580	0/0:31,0:31:90.21:0,90,1077	0/0:14,0:14:42.13:0,42,528
chr10	72761739	.	ATTAT	A	475.12	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.685;DP=502;FS=1.241;HRun=0;HaplotypeScore=80.1722;InbreedingCoeff=0.9725;MQ=71.80;MQ0=0;MQRankSum=-0.884;QD=39.59;ReadPosRankSum=1.515;VQSLOD=3.7985;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.21:0,60,1576	0/0:5,0:5:15.05:0,15,405	0/0:6,0:6:18.06:0,18,442	0/0:12,0:12:33.05:0,33,675	0/0:35,0:35:96.29:0,96,2491	0/0:26,0:26:78.27:0,78,2104	0/0:18,0:18:54.19:0,54,1393	0/0:28,0:28:81.28:0,81,2114	0/0:13,0:13:36.12:0,36,968	0/0:27,0:27:81.27:0,81,2108	0/0:30,0:30:84.27:0,84,2103	0/0:19,0:19:57.20:0,57,1504	0/0:12,0:12:33.11:0,33,880	0/0:16,0:16:48.16:0,48,1250	0/0:25,0:25:75.26:0,75,2019	0/0:11,0:11:30.10:0,30,799	0/0:16,0:16:48.16:0,48,1289	1/1:1,11:12:30.10:570,30,0	0/0:15,0:15:39.12:0,39,923	0/0:24,0:24:72.23:0,72,1843	0/0:10,0:10:24.08:0,24,648	0/0:11,0:11:30.10:0,30,809	0/0:20,0:20:60.21:0,60,1617	0/0:13,0:13:36.12:0,36,972	0/0:20,0:19:54.14:0,54,1352	0/0:24,0:24:69.24:0,69,1809	0/0:22,0:22:63.22:0,63,1656	0/0:12,0:12:36.12:0,36,946
chr10	72762048	.	C	CA	1469.20	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=7.024;DP=420;FS=4.299;HRun=10;HaplotypeScore=49.5598;InbreedingCoeff=0.7786;MQ=57.20;MQ0=21;MQRankSum=1.115;QD=11.30;ReadPosRankSum=2.454;VQSLOD=2.6544;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,21:27:51.13:544,51,0	0/0:9,0:9:23.97:0,24,197	0/1:8,0:2:12.63:14,0,13	0/0:9,0:5:1.57:0,2,27	0/0:21,0:21:39.39:0,39,321	0/0:13,0:12:26.90:0,27,218	0/0:5,1:4:5.98:0,6,49	0/0:30,0:29:59.85:0,60,487	0/0:10,0:10:26.97:0,27,222	1/1:19,0:18:20.97:193,21,0	1/1:33,0:32:27.28:386,27,0	0/0:16,0:16:23.95:0,24,197	0/0:8,0:7:14.97:0,15,122	0/0:7,0:8:17.92:0,18,141	0/0:5,0:5:11.99:0,12,99	0/0:12,0:12:23.94:0,24,195	1/1:32,0:29:56:354,56,0	0/0:24,1:25:53.91:0,54,440	0/0:13,0:13:34.74:0,35,270	0/0:10,0:11:25.98:0,26,200	0/0:8,0:6:5.99:0,6,49	0/0:3,0:3:5.99:0,6,49	0/0:21,0:22:55.68:0,56,437	0/0:13,0:11:23:0,23,178	1/1:9,0:9:26.33:153,26,0	0/0:15,0:15:20.88:0,21,254	0/0:22,0:22:56.92:0,57,465	0/0:9,0:5:14.98:0,15,123
chr10	72762057	.	A	AT	2666.22	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=0.514;DP=413;FS=11.910;HRun=0;HaplotypeScore=44.5711;InbreedingCoeff=0.6959;MQ=60.19;MQ0=15;MQRankSum=0.370;QD=22.03;ReadPosRankSum=5.675;VQSLOD=4.6227;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:49.63:50,0,55	0/0:10,0:10:27.08:0,27,358	0/0:8,0:2:4.56:0,5,39	0/1:9,0:5:3.84:4,0,69	0/0:22,0:22:54.12:0,54,671	0/0:15,0:14:42.04:0,42,493	0/0:5,0:3:8.99:0,9,103	0/0:31,0:30:87.18:0,87,1049	0/0:12,0:12:33.09:0,33,427	1/1:2,14:17:48.54:630,49,0	1/1:4,27:30:69.07:977,69,0	0/0:12,0:12:33.05:0,33,407	0/0:9,0:8:21.05:0,21,262	0/0:6,0:6:17.85:0,18,222	0/0:8,0:8:24.05:0,24,275	0/0:11,0:11:30.05:0,30,381	1/1:3,24:24:57.19:794,57,0	0/0:22,0:22:57.18:0,57,754	0/0:14,0:13:31.98:0,32,468	0/0:13,0:13:38.88:0,39,453	0/0:6,0:6:9.02:0,9,110	0/0:4,0:4:12.02:0,12,137	0/0:20,0:20:56.97:0,57,747	0/0:16,0:14:38.87:0,39,435	1/1:0,9:9:27.09:377,27,0	0/0:16,1:17:3.20:0,3,498	0/0:21,0:21:60.18:0,60,804	0/0:10,0:7:21.05:0,21,260
chr10	72763218	.	T	TCTATTCTATTC	704.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.762;DP=557;FS=8.362;HRun=0;HaplotypeScore=183.7805;InbreedingCoeff=0.8813;MQ=75.74;MQ0=0;MQRankSum=-3.153;QD=46.99;ReadPosRankSum=-1.039;VQSLOD=2.5338;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,5:15:17.99:795,18,0	0/0:13,0:13:36.12:0,36,1185	0/0:14,0:14:6.13:0,6,1013	0/0:9,0:9:21.06:0,21,500	0/0:26,0:25:75.26:0,75,2558	0/0:26,0:26:75.25:0,75,2542	0/0:12,0:12:36.11:0,36,1216	0/0:31,0:31:93.29:0,93,2829	0/0:17,0:17:51.18:0,51,1873	0/0:24,0:24:72.24:0,72,2375	0/0:22,0:22:60.21:0,60,1906	0/0:29,0:29:87.28:0,87,2853	0/0:25,0:25:72.25:0,72,2593	0/0:22,0:22:66.17:0,66,2005	0/0:24,0:24:69.22:0,69,2396	0/0:18,0:18:54.18:0,54,1816	0/0:34,0:34:99:0,102,3459	0/0:13,0:13:39.13:0,39,1384	0/0:16,0:16:48.14:0,48,1253	0/0:25,0:25:66.23:0,66,2405	0/0:9,0:9:27.08:0,27,849	0/0:23,0:23:66.18:0,66,2088	0/0:11,0:11:30.10:0,30,1048	0/0:13,0:13:36.12:0,36,1138	0/0:22,0:22:66.23:0,66,2359	0/0:27,0:27:78.27:0,78,2701	0/0:32,0:32:96.28:0,96,3115	0/0:5,0:5:15.05:0,15,559
chr10	72763640	.	TA	T	5023.87	PASS	AB=0.909;AC=23;AF=0.411;AN=56;BaseQRankSum=12.977;DP=491;FS=1.618;HRun=7;HaplotypeScore=47.1006;InbreedingCoeff=0.9334;MQ=75.29;MQ0=0;MQRankSum=0.227;QD=24.75;ReadPosRankSum=3.602;VQSLOD=5.0018;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:45.10:459,45,0	0/0:5,0:5:15.05:0,15,189	0/0:10,0:10:16.73:0,17,161	0/1:8,1:10:4.43:4,0,216	0/0:22,0:22:57.17:0,57,702	0/0:17,0:17:48.15:0,48,604	0/0:12,0:12:33.11:0,33,415	0/0:29,0:29:72.21:0,72,882	0/0:15,0:15:42.12:0,42,515	1/1:5,20:25:60.13:612,60,0	1/1:1,32:33:93.21:948,93,0	1/1:0,18:18:51.12:520,51,0	1/1:1,11:12:30.07:306,30,0	0/0:20,0:20:60.19:0,60,752	0/0:21,0:21:60.19:0,60,755	0/0:14,0:14:36.12:0,36,453	1/1:0,24:23:60.14:612,60,0	1/1:1,5:6:15.03:153,15,0	0/0:15,0:15:36.11:0,36,451	0/0:41,0:41:99:0,111,1358	0/0:16,0:16:45.11:0,45,549	1/1:0,12:12:33.08:337,33,0	1/1:5,20:25:60.14:612,60,0	1/1:1,4:5:12.03:122,12,0	1/1:3,12:15:33.07:337,33,0	0/0:19,1:20:23.56:0,24,611	0/0:25,0:25:66.19:0,66,815	0/0:6,0:6:18.06:0,18,226
chr10	72763772	.	AT	A	2233.15	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.419;DP=489;FS=1.938;HRun=10;HaplotypeScore=51.7520;InbreedingCoeff=0.9113;MQ=72.88;MQ0=1;MQRankSum=0.697;QD=18.61;ReadPosRankSum=2.586;VQSLOD=4.4670;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:24:54.14:0,54,283	0/0:12,0:12:33.09:0,33,362	0/0:22,0:15:12.30:0,12,88	0/0:10,0:9:23.47:0,23,189	0/0:31,0:31:81.20:0,81,880	0/0:12,0:13:29.91:0,30,313	0/0:12,0:12:36.04:0,36,376	0/0:34,0:34:93.18:0,93,1001	0/0:11,0:11:18.04:0,18,192	1/1:5,21:26:62.98:547,63,0	1/1:2,27:29:50.80:669,51,0	0/0:9,0:9:27.06:0,27,290	0/0:19,1:20:22.07:0,22,472	0/0:12,0:12:27.07:0,27,299	0/0:17,0:17:51.14:0,51,564	0/0:17,0:17:42.11:0,42,465	1/1:2,24:26:53.99:469,54,0	1/1:1,10:11:23.92:201,24,0	0/0:18,0:18:48.13:0,48,531	0/0:26,0:26:63.17:0,63,697	0/0:2,0:2:6.02:0,6,66	0/0:6,0:6:15.04:0,15,166	0/0:15,0:16:41.95:0,42,446	0/0:2,0:2:6.02:0,6,66	1/1:4,24:28:59.98:521,60,0	0/0:17,2:20:4.85:0,5,476	0/0:22,0:22:54.15:0,54,597	0/0:13,0:13:27.07:0,27,299
chr10	72768078	.	A	AACCTTTTGGGGGT	11604.10	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-1.721;DP=389;FS=3.681;HRun=0;HaplotypeScore=137.8059;InbreedingCoeff=0.9855;MQ=76.26;MQ0=0;MQRankSum=-12.369;QD=148.77;ReadPosRankSum=0.481;VQSLOD=5.5978;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,5:14:36.12:2029,36,0	0/0:9,0:9:21.06:0,21,738	0/0:13,0:13:33.04:0,33,1010	0/0:6,0:6:14.87:0,15,456	0/0:23,0:23:66.23:0,66,2549	0/0:14,0:14:42.14:0,42,1620	0/0:7,0:7:21.07:0,21,795	0/0:25,0:25:69.22:0,69,2036	0/0:16,0:16:48.16:0,48,1659	1/1:8,4:12:33.11:1853,33,0	1/1:8,6:14:39.13:2150,39,0	0/0:14,0:14:33.11:0,33,1247	0/0:12,0:12:30.09:0,30,1114	0/0:18,0:18:51.18:0,51,1813	0/0:11,0:11:33.11:0,33,1189	0/0:17,0:17:45.15:0,45,1581	1/1:7,10:16:48.08:2662,48,0	1/1:3,2:5:12.04:544,12,0	0/0:13,0:13:33.11:0,33,1056	0/0:21,0:21:63.22:0,63,2462	0/0:10,0:10:30.10:0,30,1070	0/0:7,0:7:18.05:0,18,553	0/0:7,0:7:21.07:0,21,787	0/0:10,0:10:27.09:0,27,1010	1/1:7,9:16:48.16:2366,48,0	0/0:20,0:20:54.18:0,54,1890	0/0:26,0:26:66.23:0,66,2581	0/0:12,0:12:33.08:0,33,1137
chr10	72768105	.	T	TA	1186.35	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-1.595;DP=357;FS=5.552;HRun=11;HaplotypeScore=58.8889;InbreedingCoeff=0.6481;MQ=65.81;MQ0=1;MQRankSum=-3.115;QD=16.03;ReadPosRankSum=-0.909;VQSLOD=4.0862;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:14.91:0,15,116	0/0:5,0:5:5.96:0,6,46	0/1:7,0:6:0.38:0,0,57	0/0:2,0:2:2.80:0,3,13	0/0:22,0:25:50.91:0,51,366	0/0:11,0:11:23.91:0,24,186	0/0:8,0:8:20.90:0,21,162	0/0:21,0:21:55.80:0,56,421	0/0:13,0:14:34.88:0,35,259	1/1:4,11:16:5.91:268,6,0	1/1:3,11:14:30.06:304,30,0	0/0:0,0:18:30.56:0,31,88	0/0:2,0:11:14.25:0,14,41	0/0:16,1:17:14.40:0,14,295	0/0:12,0:12:26.88:0,27,209	0/0:22,0:22:62.74:0,63,485	1/1:5,14:19:39.04:385,39,0	0/0:1,0:8:12.22:0,12,36	0/0:14,0:16:35.98:0,36,249	0/0:16,0:16:38.84:0,39,302	0/0:1,0:1:2.99:0,3,23	0/0:1,0:6:10.18:0,10,29	0/0:0,0:6:12.22:0,12,35	0/0:4,0:7:8.94:0,9,32	1/1:3,15:18:1.58:369,2,0	0/0:14,1:15:2.41:0,2,200	0/0:20,0:22:43.84:0,44,331	0/0:7,0:8:19.96:0,20,145
chr10	72768922	.	CTCT	C	7146.92	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=13.280;DP=454;FS=1.216;HRun=0;HaplotypeScore=69.9054;InbreedingCoeff=0.9851;MQ=72.17;MQ0=0;MQRankSum=-5.140;QD=42.80;ReadPosRankSum=1.848;VQSLOD=6.2622;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:26:48.16:800,48,0	0/0:10,0:10:30.09:0,30,639	0/0:13,0:13:36.08:0,36,754	0/0:6,0:6:15.05:0,15,323	0/0:19,0:18:51.18:0,51,1142	0/0:19,0:19:51.18:0,51,1155	0/0:12,0:12:36.11:0,36,773	0/0:32,0:32:93.31:0,93,2038	0/0:14,0:14:42.14:0,42,939	1/1:4,16:20:60.20:963,60,0	1/1:3,12:15:45.15:731,45,0	1/1:0,20:20:45.12:719,45,0	1/1:2,12:14:30.10:500,30,0	0/0:20,0:20:57.20:0,57,1262	0/0:17,0:17:48.16:0,48,1088	0/0:14,0:14:33.11:0,33,747	1/1:3,25:28:78.27:1287,78,0	1/1:1,7:8:21.07:350,21,0	0/0:20,0:20:51.13:0,51,1108	0/0:28,0:28:84.27:0,84,1844	0/0:5,0:5:15.05:0,15,340	./.	1/1:0,11:11:33.11:549,33,0	1/1:0,3:3:9.03:150,9,0	1/1:0,22:22:66.23:1098,66,0	0/0:12,0:12:36.12:0,36,802	0/0:38,0:38:99:0,108,2405	0/0:8,0:8:24.08:0,24,486
chr10	72768994	.	CA	C	2694.08	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.068;DP=590;FS=0.462;HRun=4;HaplotypeScore=63.5894;InbreedingCoeff=0.9902;MQ=80.38;MQ0=0;MQRankSum=-2.276;QD=28.66;ReadPosRankSum=1.202;VQSLOD=3.2765;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1384	0/0:11,0:11:33.10:0,33,445	0/0:17,0:17:30.59:0,31,601	0/0:22,0:22:66.10:0,66,817	0/0:28,0:28:81.27:0,81,1123	0/0:18,0:18:51.17:0,51,714	0/0:25,0:24:72.24:0,72,1003	0/0:26,0:26:72.23:0,72,979	0/0:23,0:23:69.22:0,69,947	1/1:0,25:25:72.22:864,72,0	1/1:0,17:17:42.13:503,42,0	0/0:23,0:23:54.17:0,54,739	0/0:25,0:25:66.22:0,66,923	0/0:25,0:25:72.24:0,72,1005	0/0:14,0:14:42.13:0,42,571	0/0:20,0:20:60.20:0,60,840	1/1:6,21:27:60.15:696,60,0	0/0:5,0:5:12.04:0,12,155	0/0:14,0:14:36.12:0,36,504	0/0:21,0:21:60.17:0,60,793	0/0:29,0:29:84.28:0,84,1173	0/0:9,0:9:27.08:0,27,363	0/0:17,0:17:51.05:0,51,620	0/0:26,0:26:78.20:0,78,1051	1/1:1,24:25:66.20:792,66,0	0/0:21,1:22:30.19:0,30,814	0/0:32,0:32:93.27:0,93,1252	0/0:8,0:8:24.08:0,24,335
chr10	72769443	.	GTAGAGCACTTGCC	G	1266.30	PASS	AB=0.676;AC=1;AF=0.018;AN=56;BaseQRankSum=2.969;DP=456;FS=5.546;HRun=0;HaplotypeScore=154.6604;InbreedingCoeff=-0.0170;MQ=54.83;MQ0=10;MQRankSum=-3.705;QD=55.06;ReadPosRankSum=-1.423;VQSLOD=2.6026;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:12,11:21:19.20:1341,0,19	0/0:7,0:7:21.07:0,21,1386	0/0:6,0:4:3.01:0,3,131	0/0:7,0:3:3.01:0,3,130	0/0:14,0:14:42.14:0,42,2770	0/0:25,0:25:72.23:0,72,4078	0/0:18,0:17:39.13:0,39,2254	0/0:29,0:27:81.28:0,81,5047	0/0:9,0:9:27.09:0,27,1776	0/0:21,0:21:57.20:0,57,3502	0/0:9,0:9:24.08:0,24,1580	0/0:19,0:19:51.63:0,52,2859	0/0:11,0:11:33.11:0,33,2025	0/0:9,0:9:27.07:0,27,1606	0/0:15,0:15:42.13:0,42,2360	0/0:17,0:17:51.18:0,51,3214	0/0:34,0:33:93.32:0,93,5618	0/0:24,0:24:60.21:0,60,3624	0/0:19,0:18:48.16:0,48,2635	0/0:8,0:8:24.08:0,24,1568	0/0:21,0:20:51.18:0,51,3065	0/0:9,0:9:24.08:0,24,1516	0/0:12,0:11:33.11:0,33,2170	0/0:12,0:12:36.12:0,36,2296	0/0:14,0:13:39.13:0,39,2349	0/0:15,0:14:39.13:0,39,2269	0/0:36,0:35:99:0,102,6302	0/0:13,0:13:33.11:0,33,2077
chr10	72769498	.	GA	G	631.36	PASS	AB=0.911;AC=15;AF=0.268;AN=56;BaseQRankSum=5.355;DP=456;FS=8.961;HRun=14;HaplotypeScore=54.9182;InbreedingCoeff=0.5029;MQ=62.98;MQ0=17;MQRankSum=1.430;QD=3.39;ReadPosRankSum=2.340;VQSLOD=-0.6451;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,17:25:30.84:209,31,0	0/1:5,1:6:5.58:6,0,90	0/1:29,0:17:11.07:11,0,116	0/1:15,0:8:1.79:2,0,15	0/0:17,0:16:23.01:0,23,191	0/0:10,0:9:15.02:0,15,139	0/0:22,0:21:31.91:0,32,303	0/0:23,3:26:1.84:0,2,277	0/0:10,0:10:4.30:0,4,166	1/1:7,5:13:14.75:98,15,0	1/1:5,7:11:8.83:58,9,0	0/0:14,0:15:32.86:0,33,288	0/0:14,0:13:20.50:0,20,171	0/0:13,1:16:13.50:0,13,233	0/0:15,0:14:28.16:0,28,227	0/0:15,0:14:21.01:0,21,190	1/1:11,17:28:35:252,35,0	0/0:19,0:19:35.07:0,35,307	0/1:15,3:16:12.96:13,0,197	0/0:14,0:15:11.76:0,12,200	0/0:10,0:8:15:0,15,133	0/0:4,0:5:6.89:0,7,57	0/0:12,0:13:13.34:0,13,115	0/0:8,0:11:17.62:0,18,130	1/1:4,7:12:19.88:129,20,0	0/1:21,4:25:29.44:29,0,314	0/0:22,0:22:28.13:0,28,287	0/0:11,0:10:21:0,21,187
chr10	72769714	.	AT	A	1557.04	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=9.780;DP=328;FS=5.510;HRun=8;HaplotypeScore=33.4915;InbreedingCoeff=0.7603;MQ=76.61;MQ0=0;MQRankSum=0.983;QD=19.46;ReadPosRankSum=2.316;VQSLOD=2.8546;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.13:0,48,568	0/0:4,0:4:12.04:0,12,145	0/0:10,0:8:3:0,3,29	0/1:9,0:9:10.56:11,0,98	0/0:13,0:13:39.12:0,39,471	0/0:18,0:18:51.13:0,51,594	0/0:7,0:7:18.04:0,18,202	0/0:31,0:31:84.03:0,84,975	0/0:4,0:4:9.03:0,9,108	1/1:5,15:20:45.06:435,45,0	1/1:2,14:16:42.06:405,42,0	0/0:8,0:8:21.05:0,21,244	0/0:6,0:6:18.06:0,18,217	0/0:7,0:7:21.05:0,21,241	0/0:9,0:9:27.08:0,27,326	0/0:13,0:13:33.09:0,33,389	1/1:2,16:18:45.07:434,45,0	0/0:10,0:10:30.09:0,30,362	0/0:16,0:16:48.14:0,48,571	0/0:19,0:19:51.14:0,51,605	0/0:5,0:5:12.04:0,12,145	0/0:2,0:2:6.02:0,6,72	0/0:6,0:6:15.05:0,15,181	0/0:2,0:2:5.98:0,6,46	1/1:1,16:17:45.07:434,45,0	0/0:16,0:16:45.14:0,45,543	0/0:14,0:14:39.12:0,39,471	0/0:12,0:12:36.11:0,36,435
chr10	72770303	.	AT	A	425.97	PASS	AB=0.886;AC=4;AF=0.071;AN=56;BaseQRankSum=6.200;DP=533;FS=1.590;HRun=10;HaplotypeScore=53.2377;InbreedingCoeff=0.4662;MQ=63.65;MQ0=1;MQRankSum=-1.079;QD=8.52;ReadPosRankSum=0.205;VQSLOD=1.6016;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:95.68:0,96,1000	0/0:9,0:9:21.06:0,21,232	0/0:8,0:7:17.88:0,18,177	0/0:7,0:7:11.91:0,12,111	0/0:20,0:20:43:0,43,466	0/0:17,0:17:48.13:0,48,531	0/0:21,0:21:63.13:0,63,683	0/0:33,0:33:75.12:0,75,780	0/0:11,0:11:30.07:0,30,323	0/1:9,1:10:5:5,0,178	0/0:17,0:17:36.08:0,36,387	0/0:23,0:23:60.03:0,60,622	0/0:14,0:14:9.18:0,9,307	0/0:14,0:14:42.11:0,42,465	0/0:19,0:19:25.09:0,25,505	0/0:14,0:14:39.11:0,39,431	0/0:18,0:18:48.11:0,48,521	1/1:1,19:21:59.02:501,59,0	0/1:16,3:18:29.99:30,0,376	0/0:31,0:32:82.95:0,83,901	0/0:21,0:21:63.17:0,63,697	0/0:21,0:21:54.13:0,54,588	0/0:17,1:18:19.20:0,19,424	0/0:13,0:13:39.08:0,39,421	0/0:14,0:14:39.11:0,39,431	0/0:28,0:28:75.19:0,75,821	0/0:41,0:42:99:0,114,1219	0/0:14,0:14:36.10:0,36,398
chr10	72771622	.	C	CA	768.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.451;DP=655;FS=4.600;HRun=7;HaplotypeScore=73.3936;InbreedingCoeff=0.9747;MQ=70.41;MQ0=0;MQRankSum=0.974;QD=25.61;ReadPosRankSum=-0.923;VQSLOD=4.0192;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,22:30:77.93:863,78,0	0/0:7,0:7:18.03:0,18,174	0/0:24,0:22:24.59:0,25,314	0/0:21,0:16:15.70:0,16,156	0/0:31,0:31:78.10:0,78,748	0/0:25,0:25:72.11:0,72,695	0/0:18,0:18:51.04:0,51,480	0/0:27,0:27:75.12:0,75,724	0/0:27,0:27:63.09:0,63,608	0/0:31,0:31:87.14:0,87,839	0/0:18,0:18:51.07:0,51,488	0/0:20,0:20:54.08:0,54,521	0/0:25,0:25:60.09:0,60,579	0/0:19,0:19:54.09:0,54,521	0/0:26,0:26:78.11:0,78,748	0/0:29,0:29:84.11:0,84,806	0/0:18,0:18:35.08:0,35,346	0/0:21,0:21:57.09:0,57,550	0/0:17,0:16:33.05:0,33,319	0/0:33,0:33:87.13:0,87,840	0/0:24,0:24:72.11:0,72,691	0/0:21,0:21:60.10:0,60,583	0/0:27,0:27:68.79:0,69,666	0/0:19,0:19:48.08:0,48,464	0/0:31,0:31:90.13:0,90,865	0/0:33,0:33:96.15:0,96,924	0/0:24,0:24:66.11:0,66,637	0/0:9,0:9:24.04:0,24,232
chr10	72771696	.	TA	T	1463.94	PASS	AB=0.873;AC=10;AF=0.179;AN=56;BaseQRankSum=5.216;DP=679;FS=3.697;HRun=14;HaplotypeScore=85.6618;InbreedingCoeff=0.6674;MQ=69.58;MQ0=0;MQRankSum=2.265;QD=9.09;ReadPosRankSum=3.498;VQSLOD=3.3553;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:34:79.09:0,79,447	0/0:9,0:9:24.03:0,24,223	0/0:12,0:11:8.99:0,9,77	0/1:14,2:12:18.85:19,0,72	0/0:29,1:34:60.38:0,60,633	0/0:21,0:22:41.86:0,42,369	0/0:15,0:19:32.87:0,33,293	0/0:24,1:27:42.11:0,42,488	0/0:30,1:31:60.28:0,60,669	1/1:6,22:29:64.33:432,64,0	1/1:5,26:31:68.29:468,68,0	0/0:14,0:25:28.43:0,28,172	0/0:14,0:26:29.36:0,29,186	0/1:25,5:30:30.62:31,0,449	0/0:26,1:27:28.98:0,29,387	0/0:28,2:30:24.89:0,25,509	1/1:5,19:25:49.62:335,50,0	0/0:18,0:18:39.01:0,39,353	0/0:17,2:22:1.97:0,2,334	0/0:31,1:32:50.49:0,50,567	0/0:22,0:22:48.49:0,48,435	0/0:6,0:21:21.58:0,22,119	0/0:9,0:26:12.48:0,12,61	0/0:9,0:9:2.47:0,2,12	1/1:11,18:30:34.27:347,34,0	0/0:33,1:36:39.27:0,39,475	0/0:30,0:30:73.57:0,74,647	0/0:4,0:5:13.89:0,14,104
chr10	72772659	.	G	GAAGGTATAAA	1637.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.283;DP=611;FS=1.049;HRun=0;HaplotypeScore=174.0373;InbreedingCoeff=0.9044;MQ=88.65;MQ0=0;MQRankSum=-5.456;QD=116.99;ReadPosRankSum=-1.664;VQSLOD=3.3754;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,7:14:39.13:1733,39,0	0/0:2,0:2:6.02:0,6,194	0/0:30,0:30:56.18:0,56,1546	0/0:14,0:14:27.09:0,27,815	0/0:28,0:28:81.26:0,81,2451	0/0:22,0:22:66.23:0,66,2083	0/0:15,0:15:42.14:0,42,1342	0/0:38,0:38:99:0,102,2782	0/0:23,0:23:66.21:0,66,1992	0/0:22,0:22:63.21:0,63,1912	0/0:28,0:28:75.24:0,75,2353	0/0:26,0:26:69.22:0,69,2075	0/0:22,0:22:66.23:0,66,2083	0/0:19,0:19:54.17:0,54,1651	0/0:19,0:19:54.17:0,54,1597	0/0:22,0:22:60.19:0,60,1823	0/0:27,0:27:72.25:0,72,2221	0/0:18,0:18:54.17:0,54,1573	0/0:15,0:15:45.15:0,45,1345	0/0:38,0:38:99:0,105,3152	0/0:16,0:16:48.09:0,48,1253	0/0:23,0:23:69.24:0,69,2150	0/0:22,0:22:63.19:0,63,1939	0/0:16,0:16:42.14:0,42,1268	0/0:16,0:16:48.16:0,48,1461	0/0:23,0:23:63.20:0,63,1959	0/0:30,0:30:78.27:0,78,2479	0/0:22,0:22:66.23:0,66,1975
chr10	72773173	.	CTTCT	C	174.34	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.745;DP=606;FS=0.000;HRun=0;HaplotypeScore=95.6645;InbreedingCoeff=0.9717;MQ=73.12;MQ0=1;MQRankSum=-0.968;QD=14.53;ReadPosRankSum=-0.483;VQSLOD=3.1887;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.28:0,93,2149	0/0:8,0:8:21.07:0,21,528	0/0:25,0:24:51.56:0,52,951	0/0:15,0:15:18.25:0,18,571	0/0:28,0:28:69.22:0,69,1653	0/0:22,0:22:66.23:0,66,1630	0/0:12,0:12:33.11:0,33,755	0/0:26,0:26:60.19:0,60,1350	0/0:21,0:21:51.17:0,51,1177	0/0:23,0:23:63.22:0,63,1505	0/0:20,0:20:60.18:0,60,1395	0/0:25,0:25:69.24:0,69,1733	0/0:22,0:22:60.16:0,60,1302	0/0:19,0:19:57.20:0,57,1373	0/0:24,0:24:57.19:0,57,1357	0/0:25,0:25:66.22:0,66,1619	0/0:26,0:26:63.13:0,63,1456	1/1:3,9:12:15.05:263,15,0	0/0:26,0:26:63.19:0,63,1407	0/0:25,0:25:57.17:0,57,1352	0/0:20,0:20:54.17:0,54,1250	0/0:18,0:18:51.16:0,51,1134	0/0:18,0:18:48.15:0,48,1092	0/0:15,0:15:45.14:0,45,1038	0/0:30,0:29:87.25:0,87,1964	0/0:37,0:37:93.32:0,93,2279	0/0:21,0:21:63.17:0,63,1431	0/0:12,0:12:30.10:0,30,664
chr10	72778325	.	ATGTGTGTG	A	2369.81	PASS	AB=0.617;AC=15;AF=0.278;AN=54;BaseQRankSum=8.869;DP=463;FS=19.246;HRun=0;HaplotypeScore=127.0568;InbreedingCoeff=0.6366;MQ=56.13;MQ0=5;MQRankSum=-10.003;QD=15.90;ReadPosRankSum=-0.031;VQSLOD=1.6538;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:11:2.03:14,2,0	0/0:9,0:9:21.07:0,21,695	./.	0/0:10,0:5:3.01:0,3,35	0/0:25,0:27:66.21:0,66,2144	0/0:17,0:17:24.08:0,24,888	0/0:8,0:10:15.05:0,15,537	0/0:34,0:34:30.05:0,30,817	0/0:11,0:11:23.23:0,23,729	1/1:10,4:14:12.04:293,12,0	1/1:9,10:20:24.08:504,24,0	1/1:9,1:15:14.62:138,15,0	0/1:4,1:14:16.98:165,0,17	0/0:6,0:9:7.27:0,7,176	0/0:17,0:16:24.06:0,24,679	0/0:15,0:15:30.10:0,30,1184	1/1:7,4:11:6.02:147,6,0	0/0:4,0:10:23.18:0,23,178	0/0:15,0:17:21.06:0,21,650	0/0:18,0:20:42.13:0,42,1356	0/0:18,0:22:27.05:0,27,746	0/1:8,1:19:14.58:166,0,15	0/1:8,1:19:1.94:99,0,2	0/0:12,0:12:0.47:0,0,1	1/1:11,15:26:42.14:1018,42,0	0/0:29,0:28:48.16:0,48,1489	0/0:21,0:24:42.14:0,42,1464	0/0:10,0:11:27.09:0,27,961
chr10	72780140	.	TCC	T	2285.63	PASS	AB=0.528;AC=3;AF=0.054;AN=56;BaseQRankSum=9.211;DP=677;FS=7.312;HRun=2;HaplotypeScore=79.0273;InbreedingCoeff=0.6396;MQ=75.49;MQ0=0;MQRankSum=-5.010;QD=40.10;ReadPosRankSum=1.885;VQSLOD=3.3307;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:99:1663,102,0	0/0:5,0:5:15.04:0,15,269	0/0:25,0:25:75.24:0,75,1459	0/0:21,0:21:57.10:0,57,1019	0/0:24,0:24:72.25:0,72,1454	0/0:29,0:29:87.30:0,87,1739	0/0:21,0:21:63.20:0,63,1233	0/0:30,0:30:90.30:0,90,1789	0/0:26,0:26:78.27:0,78,1585	0/0:31,0:31:93.32:0,93,1848	0/0:20,0:20:60.21:0,60,1218	0/0:23,0:23:69.23:0,69,1344	0/0:20,0:20:60.21:0,60,1189	0/0:26,0:26:78.27:0,78,1569	0/0:27,0:27:81.27:0,81,1610	0/0:26,0:26:78.27:0,78,1583	0/0:22,0:22:66.21:0,66,1301	0/1:2,17:19:53.64:728,0,54	0/0:32,0:32:96.33:0,96,1919	0/0:28,0:28:84.29:0,84,1686	0/0:27,0:27:81.28:0,81,1631	0/0:29,0:29:87.30:0,87,1740	0/0:21,0:21:63.17:0,63,1171	0/0:24,0:24:72.13:0,72,1379	0/0:21,0:21:63.22:0,63,1252	0/0:30,0:30:90.31:0,90,1828	0/0:24,0:24:72.25:0,72,1449	0/0:8,0:8:24.08:0,24,487
chr10	72780566	.	TA	T	3441.45	PASS	AB=0.995;AC=49;AF=0.875;AN=56;BaseQRankSum=5.961;DP=568;FS=2.252;HRun=4;HaplotypeScore=99.2962;InbreedingCoeff=-0.1675;MQ=75.71;MQ0=0;MQRankSum=-2.521;QD=6.06;ReadPosRankSum=7.922;VQSLOD=-0.3835;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:40,1:41:49.49:270,49,0	1/1:11,0:11:17.04:60,17,0	1/1:15,0:15:2.23:45,2,0	0/1:15,0:16:46.23:55,0,46	1/1:12,0:12:27.25:115,27,0	1/1:26,0:26:32.36:180,32,0	0/1:26,0:26:47.78:94,0,48	1/1:32,0:32:16.97:104,17,0	1/1:29,1:30:64.61:280,65,0	1/1:18,1:19:36.23:165,36,0	0/1:17,0:17:4.49:65,0,4	1/1:24,0:24:8.53:145,9,0	1/1:12,0:12:9.52:86,10,0	1/1:16,0:16:9.50:107,9,0	0/1:23,0:23:12.97:108,0,13	1/1:17,0:17:6.89:90,7,0	0/1:33,0:33:5.75:134,0,6	1/1:14,0:14:1.05:66,1,0	0/1:24,1:25:35.55:89,0,36	1/1:18,0:18:35.61:129,36,0	1/1:20,0:20:30.43:97,30,0	1/1:14,3:17:39.02:224,39,0	1/1:15,1:16:31.76:157,32,0	1/1:15,0:15:9.80:83,10,0	0/1:17,0:17:9.01:83,0,9	1/1:25,1:26:5.96:145,6,0	1/1:23,0:23:51.21:196,51,0	1/1:7,0:7:17.36:67,17,0
chr10	72780755	.	AG	A	11335.33	PASS	AC=52;AF=1.000;AN=52;BaseQRankSum=-5.949;DP=462;FS=2.736;HRun=4;HaplotypeScore=599.8793;InbreedingCoeff=-0.0151;MQ=32.90;MQ0=0;MQRankSum=0.712;QD=24.64;ReadPosRankSum=8.560;VQSLOD=0.0983;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,6:8:11.95:124,12,0	1/1:0,10:10:10.31:215,10,0	./.	./.	1/1:2,27:29:48.24:623,48,0	1/1:1,17:18:40.44:487,40,0	1/1:2,24:26:66.07:762,66,0	1/1:6,19:25:5.20:373,5,0	1/1:0,14:14:41.53:450,42,0	1/1:0,22:22:53.17:560,53,0	1/1:1,16:17:30.99:459,31,0	1/1:1,20:21:62.11:694,62,0	1/1:2,20:22:45.90:531,46,0	1/1:2,24:26:36.07:510,36,0	1/1:1,23:24:41.07:570,41,0	1/1:0,16:16:24.63:404,25,0	1/1:1,16:17:18.69:338,19,0	1/1:1,10:11:20.43:224,20,0	1/1:2,11:13:29.26:304,29,0	1/1:0,16:16:42.10:494,42,0	1/1:2,7:9:10.36:111,10,0	1/1:0,27:27:34.19:527,34,0	1/1:0,25:25:57.66:710,58,0	1/1:0,7:7:11.90:142,12,0	1/1:0,17:17:50.94:586,51,0	1/1:1,19:20:56.65:644,57,0	1/1:3,15:18:39.42:448,39,0	1/1:0,2:2:5.38:44,5,0
chr10	72780763	.	GCT	G	14457.06	PASS	AC=52;AF=1.000;AN=52;BaseQRankSum=-4.727;DP=433;FS=14.294;HRun=0;HaplotypeScore=641.4642;InbreedingCoeff=-0.0139;MQ=28.82;MQ0=0;MQRankSum=-1.308;QD=33.39;ReadPosRankSum=6.378;VQSLOD=1.2202;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:6:11.91:161,12,0	1/1:0,10:10:21.03:290,21,0	./.	./.	1/1:0,27:27:54.57:768,55,0	1/1:0,17:17:35.45:566,35,0	1/1:0,24:24:59.47:907,59,0	1/1:0,19:19:34.93:557,35,0	1/1:0,14:14:41.90:555,42,0	1/1:0,21:21:51.88:690,52,0	1/1:0,16:16:33.61:551,34,0	1/1:0,20:20:56.64:820,57,0	1/1:0,19:19:44.93:657,45,0	1/1:0,26:26:44.84:659,45,0	1/1:0,25:25:50.75:806,51,0	1/1:0,17:17:33.67:533,34,0	1/1:0,17:17:29.44:474,29,0	1/1:0,8:8:18.06:275,18,0	1/1:0,12:12:27.09:409,27,0	1/1:0,15:15:37.97:589,38,0	1/1:0,8:8:5.14:141,5,0	1/1:0,26:26:52.76:749,53,0	1/1:0,25:25:50.62:913,51,0	1/1:0,7:7:11.99:164,12,0	1/1:0,17:17:51.12:797,51,0	1/1:0,20:20:57.05:876,57,0	1/1:0,15:15:32.42:501,32,0	1/1:0,2:2:3.01:49,3,0
chr10	72780771	.	GT	G	3838.72	PASS	AB=0.600;AC=49;AF=0.942;AN=52;BaseQRankSum=0.914;DP=415;FS=0.731;HRun=1;HaplotypeScore=665.2087;InbreedingCoeff=0.3134;MQ=28.82;MQ0=0;MQRankSum=0.003;QD=9.65;ReadPosRankSum=8.213;VQSLOD=0.6802;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,4:6:5.78:35,6,0	0/1:3,6:9:4.16:34,0,4	./.	./.	1/1:7,18:25:18.64:179,19,0	1/1:3,14:17:22.49:180,22,0	1/1:13,10:22:30.37:216,30,0	0/0:9,8:17:4.46:0,4,39	1/1:4,8:12:21.96:151,22,0	1/1:4,16:20:33.30:201,33,0	1/1:3,13:16:26.43:212,26,0	1/1:6,12:18:34.06:228,34,0	1/1:6,13:19:19.02:154,19,0	1/1:6,20:26:18.89:171,19,0	1/1:8,17:25:10.44:188,10,0	1/1:0,17:17:24.83:219,25,0	1/1:5,10:15:7.67:128,8,0	1/1:3,4:7:6.47:51,6,0	1/1:7,5:12:10.64:49,11,0	1/1:2,13:15:32.82:238,33,0	1/1:2,5:7:6.35:30,6,0	1/1:5,21:26:6.60:175,7,0	1/1:8,16:24:34.64:276,35,0	1/1:3,4:7:5.81:41,6,0	1/1:11,6:17:25.53:172,26,0	1/1:3,15:18:36:291,36,0	1/1:4,11:15:26.95:188,27,0	1/1:0,2:2:5.36:32,5,0
chr10	72780777	.	ATC	A	5024.37	PASS	AB=0.500;AC=50;AF=0.962;AN=52;BaseQRankSum=-2.090;DP=287;FS=16.303;HRun=0;HaplotypeScore=576.3342;InbreedingCoeff=-0.0535;MQ=28.90;MQ0=0;MQRankSum=0.839;QD=17.51;ReadPosRankSum=5.974;VQSLOD=2.9683;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:4:2.63:31,3,0	1/1:0,6:6:8.07:72,8,0	./.	./.	1/1:0,18:18:27.17:256,27,0	1/1:0,14:14:22.95:251,23,0	1/1:0,10:10:20.39:204,20,0	0/1:0,8:8:2.45:39,0,2	1/1:0,8:8:19.39:194,19,0	1/1:0,16:16:30.89:255,31,0	1/1:0,13:13:23.60:247,24,0	1/1:0,12:12:21.38:295,21,0	1/1:0,13:13:18.97:219,19,0	1/1:0,20:20:25.92:250,26,0	1/1:0,17:17:23.73:267,24,0	1/1:0,17:17:33.44:341,33,0	1/1:0,10:10:15.25:168,15,0	1/1:0,4:4:8.94:87,9,0	1/1:0,5:5:5.83:38,6,0	1/1:0,13:13:29.38:306,29,0	0/1:0,5:5:2.44:25,0,2	1/1:0,21:21:32.77:286,33,0	1/1:0,16:16:25.21:321,25,0	1/1:0,4:4:6:61,6,0	1/1:0,6:6:16.59:161,17,0	1/1:0,15:15:39.05:420,39,0	1/1:0,10:10:19.20:195,19,0	1/1:0,2:2:3.01:34,3,0
chr10	72780784	.	GC	G	4053.61	PASS	AB=0.500;AC=49;AF=0.942;AN=52;BaseQRankSum=-3.576;DP=287;FS=0.761;HRun=1;HaplotypeScore=574.1627;InbreedingCoeff=0.3105;MQ=28.90;MQ0=0;MQRankSum=-0.281;QD=14.53;ReadPosRankSum=5.349;VQSLOD=0.2920;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:4:5.79:37,6,0	0/1:0,6:6:2.41:41,0,2	./.	./.	1/1:0,18:18:18.97:232,19,0	1/1:0,14:14:23.34:207,23,0	1/1:0,10:10:25.85:182,26,0	0/0:0,8:8:4.02:0,4,37	1/1:0,8:8:22.40:173,22,0	1/1:0,16:16:33.94:230,34,0	1/1:0,13:13:18.69:189,19,0	1/1:0,12:12:34.71:257,35,0	1/1:0,13:13:24.77:208,25,0	1/1:0,19:20:19.46:194,19,0	1/1:0,17:17:8.67:180,9,0	1/1:0,17:17:25.11:257,25,0	1/1:0,10:10:5.10:127,5,0	1/1:0,4:4:6.88:53,7,0	1/1:0,5:5:7.81:32,8,0	1/1:1,12:13:29.59:248,30,0	1/1:0,5:5:6.37:33,6,0	1/1:1,20:21:17.17:217,17,0	1/1:0,16:16:29.42:258,29,0	1/1:0,4:4:5.84:46,6,0	1/1:0,6:6:17.18:126,17,0	1/1:0,15:15:40.43:327,40,0	1/1:0,10:10:20.76:162,21,0	1/1:0,2:2:5.37:35,5,0
chr10	72780786	.	GC	G	1645.62	PASS	AB=0.500;AC=49;AF=0.942;AN=52;BaseQRankSum=-3.087;DP=287;FS=1.617;HRun=1;HaplotypeScore=583.0583;InbreedingCoeff=0.2983;MQ=28.90;MQ0=0;MQRankSum=1.210;QD=5.90;ReadPosRankSum=4.749;VQSLOD=1.1241;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:4:5.34:22,5,0	0/1:0,6:6:3.71:12,0,4	./.	./.	1/1:0,18:18:15.86:105,16,0	1/1:0,14:14:18.01:83,18,0	1/1:0,10:10:23.61:94,24,0	0/0:0,8:8:5.43:0,5,39	1/1:0,8:8:19.96:80,20,0	1/1:0,16:16:29.68:120,30,0	1/1:0,13:13:14.78:74,15,0	1/1:0,12:12:29.86:113,30,0	1/1:0,13:13:21.95:101,22,0	1/1:1,19:20:15.89:87,16,0	1/1:0,17:17:5.31:63,5,0	1/1:0,17:17:20.14:96,20,0	1/1:0,10:10:2.24:40,2,0	1/1:0,4:4:5.27:22,5,0	1/1:0,5:5:4.92:14,5,0	1/1:1,12:13:24.64:109,25,0	1/1:0,5:5:5.76:19,6,0	1/1:0,21:21:12.05:84,12,0	1/1:0,16:16:24.52:106,25,0	1/1:0,4:4:4.86:18,5,0	1/1:0,6:6:14.72:53,15,0	1/1:0,15:15:35.17:138,35,0	1/1:0,10:10:17.66:72,18,0	1/1:0,2:2:5.05:20,5,0
chr10	72780788	.	AC	A	4127.07	PASS	AB=0.500;AC=49;AF=0.942;AN=52;BaseQRankSum=-3.601;DP=288;FS=0.761;HRun=1;HaplotypeScore=575.4455;InbreedingCoeff=0.3040;MQ=28.90;MQ0=0;MQRankSum=-0.047;QD=14.74;ReadPosRankSum=4.316;VQSLOD=0.2327;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:4:5.79:37,6,0	0/1:0,6:6:2.41:44,0,2	./.	./.	1/1:0,18:18:19.10:233,19,0	1/1:0,14:14:23.36:215,23,0	1/1:0,10:10:25.84:182,26,0	0/0:0,8:8:3.66:0,4,36	1/1:0,8:8:22.41:174,22,0	1/1:0,16:16:34.09:243,34,0	1/1:0,13:13:18.59:193,19,0	1/1:1,12:13:34.74:259,35,0	1/1:0,13:13:24.76:201,25,0	1/1:0,20:20:19.65:202,20,0	1/1:0,17:17:8.68:182,9,0	1/1:0,17:17:25.14:263,25,0	1/1:0,10:10:5.11:128,5,0	1/1:0,4:4:6.89:55,7,0	1/1:0,5:5:7.92:35,8,0	1/1:0,13:13:30.13:257,30,0	1/1:0,5:5:6.37:34,6,0	1/1:0,21:21:17.19:222,17,0	1/1:0,16:16:29.43:259,29,0	1/1:0,4:4:5.98:47,6,0	1/1:0,6:6:17.18:127,17,0	1/1:0,15:15:40.44:337,40,0	1/1:0,10:10:20.77:163,21,0	1/1:0,2:2:5.37:35,5,0
chr10	72780795	.	AG	A	3976.86	PASS	AB=0.500;AC=50;AF=0.962;AN=52;BaseQRankSum=-1.934;DP=407;FS=3.397;HRun=2;HaplotypeScore=732.5092;InbreedingCoeff=-0.0559;MQ=28.85;MQ0=0;MQRankSum=0.101;QD=9.77;ReadPosRankSum=0.514;VQSLOD=-0.0159;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:2.75:28,3,0	0/1:0,8:7:2.63:35,0,3	./.	./.	1/1:0,26:26:17.36:139,17,0	1/1:0,21:21:19.82:174,20,0	1/1:0,18:18:17.87:145,18,0	0/1:0,19:19:3.20:212,0,3	1/1:0,12:12:21.12:123,21,0	1/1:0,19:19:39.96:271,40,0	1/1:0,17:16:18.18:156,18,0	1/1:0,19:19:34.43:221,34,0	1/1:0,19:19:24.62:173,25,0	1/1:0,26:26:19.39:172,19,0	1/1:0,26:26:8.32:149,8,0	1/1:0,17:17:24.87:217,25,0	1/1:0,16:16:10.69:143,11,0	1/1:0,6:6:9.14:62,9,0	1/1:0,14:14:33.95:246,34,0	1/1:0,16:16:29.32:210,29,0	1/1:0,5:5:6.34:30,6,0	1/1:1,21:22:16.32:182,16,0	1/1:0,20:20:28.68:210,29,0	1/1:0,8:8:0.66:29,1,0	1/1:0,9:9:17.07:109,17,0	1/1:0,15:15:40.28:305,40,0	1/1:0,14:14:23.46:163,23,0	1/1:0,5:5:11.31:74,11,0
chr10	72780798	.	AC	A	4559.85	PASS	AB=0.500;AC=52;AF=0.963;AN=54;BaseQRankSum=-3.119;DP=408;FS=0.724;HRun=1;HaplotypeScore=704.1960;InbreedingCoeff=0.1255;MQ=31.44;MQ0=0;MQRankSum=1.122;QD=11.18;ReadPosRankSum=-1.247;VQSLOD=1.2852;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:7.92:41,8,0	0/1:0,8:7:1.94:42,0,2	1/1:1,0:1:0.47:1,0,0	./.	1/1:0,26:26:15.58:143,16,0	1/1:0,21:21:20.68:202,21,0	1/1:0,18:18:28.35:181,28,0	0/1:0,19:19:2.40:243,0,2	1/1:0,12:12:21.42:137,21,0	1/1:0,19:19:40.27:304,40,0	1/1:0,17:16:18.53:183,19,0	1/1:0,19:19:34.68:251,35,0	1/1:0,19:19:24.74:193,25,0	1/1:0,26:26:19.57:197,20,0	1/1:0,26:26:8.65:174,9,0	1/1:0,17:17:25.09:250,25,0	1/1:0,16:16:10.83:164,11,0	1/1:0,6:6:10.20:73,10,0	1/1:0,14:14:34.52:278,35,0	1/1:0,16:16:30.97:235,31,0	1/1:0,5:5:6.36:33,6,0	1/1:0,22:22:16.70:212,17,0	1/1:0,20:20:29.28:244,29,0	1/1:0,8:8:0.73:36,1,0	1/1:0,9:9:17.64:125,18,0	1/1:0,15:15:40.48:345,40,0	1/1:0,14:14:23.60:188,24,0	1/1:0,5:5:11.36:85,11,0
chr10	72780807	.	AT	A	11733.80	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=-5.515;DP=431;FS=1.596;HRun=1;HaplotypeScore=707.4795;InbreedingCoeff=0.4660;MQ=31.34;MQ0=0;MQRankSum=-0.087;QD=27.29;ReadPosRankSum=-6.069;VQSLOD=-0.2953;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:21.03:253,21,0	1/1:0,8:7:1.39:130,1,0	0/0:1,0:1:2.04:0,2,6	./.	1/1:0,24:24:30.31:455,30,0	1/1:0,22:22:44.85:662,45,0	1/1:0,22:22:54.53:625,55,0	1/1:0,15:15:20.50:402,21,0	1/1:0,13:13:38.94:484,39,0	1/1:0,20:20:48.20:564,48,0	1/1:0,17:16:22.30:367,22,0	1/1:0,18:18:50.34:643,50,0	1/1:0,19:19:43.25:557,43,0	1/1:0,30:30:50.81:771,51,0	1/1:0,27:27:39.54:721,40,0	1/1:0,18:18:28.33:487,28,0	1/1:0,17:17:22.21:428,22,0	1/1:0,6:6:14.71:121,15,0	1/1:0,18:18:46.91:524,47,0	1/1:0,18:18:47.39:609,47,0	1/1:0,6:6:9.07:52,9,0	1/1:0,26:26:34.93:632,35,0	1/1:0,20:20:36.54:541,37,0	1/1:0,10:10:6.81:158,7,0	1/1:0,9:9:27.04:351,27,0	1/1:0,17:17:44.62:584,45,0	1/1:0,14:14:30.50:400,30,0	1/1:0,6:6:17.42:215,17,0
chr10	72780816	.	AGT	A	9448.33	PASS	AB=0.500;AC=51;AF=0.944;AN=54;BaseQRankSum=-3.361;DP=323;FS=7.744;HRun=0;HaplotypeScore=557.2804;InbreedingCoeff=0.3642;MQ=32.11;MQ0=0;MQRankSum=-0.212;QD=29.34;ReadPosRankSum=-3.775;VQSLOD=1.3583;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:20.76:248,21,0	1/1:0,8:7:12.04:171,12,0	0/0:1,0:1:2.04:0,2,6	./.	1/1:0,18:18:31.13:389,31,0	1/1:0,18:18:38.28:572,38,0	1/1:0,16:16:30.60:482,31,0	1/1:0,3:3:5.52:55,6,0	1/1:0,10:10:29.91:409,30,0	1/1:0,13:13:27.86:340,28,0	1/1:0,12:11:18.55:304,19,0	1/1:0,14:14:38.37:575,38,0	1/1:0,17:18:41.82:587,42,0	1/1:0,26:26:47.37:700,47,0	1/1:0,22:22:41.68:652,42,0	1/1:0,14:14:24.60:383,25,0	1/1:0,14:14:26.69:404,27,0	1/1:0,4:4:8.92:90,9,0	1/1:0,13:13:30.01:386,30,0	1/1:0,16:16:40.42:589,40,0	0/1:0,3:3:2.43:35,0,2	1/1:0,22:22:40.67:545,41,0	1/1:0,11:11:12.33:278,12,0	1/1:0,10:10:9.83:204,10,0	1/1:0,7:7:21:306,21,0	1/1:0,8:8:20.52:251,21,0	1/1:0,10:10:20.37:302,20,0	1/1:0,5:5:12.04:193,12,0
chr10	72780824	.	AC	A	3629.19	PASS	AB=0.500;AC=51;AF=0.944;AN=54;BaseQRankSum=-3.493;DP=324;FS=4.875;HRun=2;HaplotypeScore=573.8499;InbreedingCoeff=0.3133;MQ=32.10;MQ0=0;MQRankSum=-1.141;QD=11.24;ReadPosRankSum=-3.059;VQSLOD=-0.0001;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:19.71:107,20,0	1/1:0,8:7:0.08:48,0,0	0/0:1,0:1:2.04:0,2,6	./.	1/1:0,18:18:13.30:112,13,0	1/1:0,18:18:30.88:218,31,0	1/1:0,16:16:37.96:210,38,0	0/1:0,3:3:2.52:12,0,3	1/1:0,10:10:27.69:163,28,0	1/1:0,13:13:27.84:150,28,0	1/1:0,12:11:12.02:110,12,0	1/1:0,14:14:40.19:243,40,0	1/1:0,18:18:38.77:251,39,0	1/1:0,25:26:36.89:274,37,0	1/1:0,22:22:22.96:232,23,0	1/1:0,14:14:15.83:145,16,0	1/1:1,14:15:14.76:151,15,0	1/1:0,4:4:3.31:10,3,0	1/1:0,13:13:23.69:126,24,0	1/1:0,16:16:33:226,33,0	1/1:0,3:3:6.17:21,6,0	1/1:0,22:22:18.76:187,19,0	1/1:0,10:11:13.09:101,13,0	1/1:0,10:10:14.87:106,15,0	1/1:0,7:7:19.78:122,20,0	1/1:0,8:8:11.97:87,12,0	1/1:0,10:10:20.32:129,20,0	1/1:0,5:5:14.22:87,14,0
chr10	72780826	.	AC	A	3665.68	PASS	AB=0.500;AC=51;AF=0.944;AN=54;BaseQRankSum=-3.824;DP=324;FS=6.378;HRun=1;HaplotypeScore=573.0224;InbreedingCoeff=0.3159;MQ=32.10;MQ0=0;MQRankSum=-0.349;QD=11.35;ReadPosRankSum=-3.044;VQSLOD=0.2272;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:19.74:109,20,0	1/1:0,8:7:0.09:48,0,0	0/0:1,0:1:2.04:0,2,6	./.	1/1:0,18:18:13.40:118,13,0	1/1:0,18:18:30.89:219,31,0	1/1:0,16:16:37.97:211,38,0	0/1:0,3:3:2.52:12,0,3	1/1:0,10:10:27.70:164,28,0	1/1:0,13:13:27.84:150,28,0	1/1:0,12:11:12.02:111,12,0	1/1:0,14:14:40.20:243,40,0	1/1:0,18:18:38.76:252,39,0	1/1:1,25:26:36.97:276,37,0	1/1:0,22:22:22.96:233,23,0	1/1:0,14:14:15.83:145,16,0	1/1:1,14:15:14.22:149,14,0	1/1:0,4:4:3.31:10,3,0	1/1:0,13:13:23.70:126,24,0	1/1:0,16:16:32.73:226,33,0	1/1:0,3:3:6.17:21,6,0	1/1:0,22:22:18.76:187,19,0	1/1:1,10:11:14.59:110,15,0	1/1:0,10:10:19.26:119,19,0	1/1:0,7:7:19.80:122,20,0	1/1:0,8:8:11.97:87,12,0	1/1:0,10:10:20.32:129,20,0	1/1:0,5:5:14.22:87,14,0
chr10	72780836	.	AT	A	4931.08	PASS	AB=0.500;AC=47;AF=0.839;AN=56;BaseQRankSum=-5.320;DP=218;FS=8.957;HRun=1;HaplotypeScore=341.6957;InbreedingCoeff=0.2915;MQ=47.85;MQ0=0;MQRankSum=0.090;QD=23.48;ReadPosRankSum=5.400;VQSLOD=2.7936;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:15.04:193,15,0	0/1:0,6:5:4.60:71,0,5	0/0:2,0:3:1.26:0,1,5	0/0:2,1:2:2.84:0,3,14	1/1:0,14:14:9.50:191,9,0	1/1:0,12:12:14.62:281,15,0	1/1:0,9:9:22.62:291,23,0	0/0:0,2:2:1.25:0,1,3	1/1:0,6:6:18.06:246,18,0	1/1:0,10:10:21.29:247,21,0	1/1:0,9:8:4.32:149,4,0	1/1:0,8:8:24.08:327,24,0	1/1:0,12:12:22.28:325,22,0	1/1:1,20:21:23.65:395,24,0	1/1:0,19:19:15.61:426,16,0	0/1:0,7:7:4.78:39,0,5	1/1:0,12:12:22.38:302,22,0	1/1:0,2:2:2.88:15,3,0	1/1:0,5:5:11.23:112,11,0	1/1:0,8:8:17.30:247,17,0	1/1:0,1:1:1.82:5,2,0	0/1:0,12:12:5.58:177,0,6	1/1:1,5:6:3.77:139,4,0	1/1:0,7:7:17.88:203,18,0	1/1:0,3:3:9.03:123,9,0	1/1:0,5:5:8.39:123,8,0	1/1:0,7:7:12.48:173,12,0	1/1:0,4:4:11.40:132,11,0
chr10	72780840	.	GTATT	G	5624.30	PASS	AB=0.500;AC=49;AF=0.907;AN=54;BaseQRankSum=-3.839;DP=219;FS=13.321;HRun=0;HaplotypeScore=353.5472;InbreedingCoeff=0.4272;MQ=50.73;MQ0=0;MQRankSum=-0.226;QD=26.66;ReadPosRankSum=6.963;VQSLOD=3.4520;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:15.05:210,15,0	1/1:0,6:5:9.83:113,10,0	0/0:2,0:3:0.42:0,0,2	0/0:3,1:3:3.90:0,4,44	1/1:0,14:14:21.26:251,21,0	1/1:0,12:12:20.79:331,21,0	1/1:0,9:9:21.74:312,22,0	0/1:0,2:2:0.78:2,0,1	1/1:0,6:6:18.06:258,18,0	1/1:0,10:10:5.80:260,6,0	1/1:0,9:8:8.56:177,9,0	1/1:0,8:8:24.08:359,24,0	1/1:1,11:12:11.27:311,11,0	1/1:0,21:21:8.56:438,9,0	1/1:0,19:19:19.75:503,20,0	1/1:0,7:7:4.30:51,4,0	1/1:1,11:12:32.32:363,32,0	1/1:0,2:2:2.79:15,3,0	1/1:0,5:5:9.79:118,10,0	1/1:0,8:8:22.56:293,23,0	./.	1/1:0,12:12:13.78:231,14,0	1/1:0,6:6:14.48:188,14,0	1/1:0,7:7:18.05:238,18,0	1/1:0,3:3:9.03:138,9,0	1/1:0,5:5:11.83:153,12,0	1/1:0,7:7:10.97:176,11,0	1/1:0,4:4:7.70:136,8,0
chr10	72780847	.	GT	G	1058.45	PASS	AB=0.518;AC=47;AF=0.839;AN=56;BaseQRankSum=-3.874;DP=232;FS=6.501;HRun=1;HaplotypeScore=359.6788;InbreedingCoeff=0.3423;MQ=47.83;MQ0=0;MQRankSum=-0.446;QD=4.77;ReadPosRankSum=6.363;VQSLOD=0.0751;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,5:7:13.97:50,14,0	0/1:0,6:5:5.26:12,0,5	0/0:2,0:2:4.26:0,4,47	0/0:4,2:5:4.59:0,5,28	1/1:1,14:15:8.43:51,8,0	1/1:0,12:12:10.89:59,11,0	1/1:0,9:9:18.54:66,19,0	0/0:0,2:2:2.37:0,2,8	1/1:0,6:6:14.97:53,15,0	1/1:0,10:10:19.51:83,20,0	1/1:1,9:9:3.39:34,3,0	1/1:0,8:8:20.51:76,21,0	1/1:0,12:12:18.59:77,19,0	1/1:2,21:23:18.90:98,19,0	1/1:0,19:19:10.86:84,11,0	0/1:1,7:8:4.42:8,0,4	1/1:1,11:12:17.73:73,18,0	1/1:2,2:4:4.44:14,4,0	1/1:1,5:6:8.11:30,8,0	1/1:0,8:8:12.74:59,13,0	1/1:0,1:1:1.82:5,2,0	0/1:1,12:13:5.19:33,0,5	1/1:0,6:6:1.88:27,2,0	1/1:0,7:7:11.08:39,11,0	1/1:0,3:3:7.85:30,8,0	1/1:0,5:5:3.67:26,4,0	1/1:1,7:8:13.12:56,13,0	1/1:0,4:4:10.21:40,10,0
chr10	72781274	.	TA	T	2773.56	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.711;DP=601;FS=0.387;HRun=9;HaplotypeScore=64.0748;InbreedingCoeff=0.9719;MQ=73.97;MQ0=0;MQRankSum=-0.419;QD=22.19;ReadPosRankSum=2.710;VQSLOD=4.4398;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:38:99:934,102,0	0/0:8,1:9:18.05:0,18,208	0/0:18,0:16:5.52:0,6,243	0/0:18,0:15:17.26:0,17,210	0/0:24,1:25:60.18:0,60,692	0/0:25,0:25:60.16:0,60,682	0/0:23,0:23:57.17:0,57,657	0/0:37,0:37:99:0,99,1117	0/0:18,0:18:45.13:0,45,519	1/1:2,18:20:54.02:490,54,0	1/1:4,17:21:48.01:439,48,0	0/0:22,0:22:51.15:0,51,589	0/0:26,0:27:75.05:0,75,844	0/0:29,0:29:78.23:0,78,900	0/0:26,0:26:75.22:0,75,865	0/0:17,0:17:48.14:0,48,554	1/1:3,16:19:45.02:412,45,0	1/1:2,13:15:39.02:357,39,0	0/0:18,0:18:45.13:0,45,519	0/0:17,0:17:45.12:0,45,510	0/0:34,0:34:90.27:0,90,1038	0/0:20,0:20:51.71:0,52,581	0/0:17,0:17:39.12:0,39,450	0/0:25,0:25:66.20:0,66,762	1/1:0,12:12:36.02:329,36,0	0/0:21,0:21:60.18:0,60,692	0/0:24,0:24:66.20:0,66,762	0/0:6,0:6:18.05:0,18,208
chr10	72781713	.	AAG	A	572.10	PASS	AB=0.968;AC=22;AF=0.440;AN=50;BaseQRankSum=0.199;DP=404;FS=26.600;HRun=0;HaplotypeScore=73.2421;InbreedingCoeff=-0.5483;MQ=27.68;MQ0=64;MQRankSum=-0.607;QD=1.93;ReadPosRankSum=3.806;VQSLOD=-0.3941;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:17:10.04:10,0,58	0/1:7,0:6:22.36:22,0,59	./.	./.	0/1:32,0:30:54.16:54,0,174	0/1:20,0:16:40.09:40,0,56	0/1:7,1:6:22.37:22,0,24	0/1:17,1:12:56.23:59,0,56	0/1:15,0:14:26.18:26,0,43	0/0:15,0:9:0.61:0,1,50	0/1:17,1:17:41.66:102,0,42	0/1:5,1:6:6.23:22,0,6	0/1:4,0:3:9.23:9,0,12	1/1:7,0:6:3.03:22,3,0	0/1:21,0:19:62.01:62,0,85	0/1:10,0:10:3.88:4,0,66	0/1:11,0:7:2.96:3,0,31	./.	0/1:11,0:10:4.46:4,0,86	0/1:21,1:21:8.68:120,0,9	0/1:10,0:8:7.44:7,0,16	0/0:6,0:6:6.61:0,7,32	0/1:5,0:4:5.87:6,0,12	0/1:8,2:7:7.80:47,0,8	0/1:12,0:12:9:9,0,38	0/1:25,0:20:57.13:57,0,62	0/0:20,0:18:8.75:0,9,199	0/0:26,0:17:20.29:0,20,208
chr10	72781738	.	AGAACC	A	2459.18	PASS	AB=0.876;AC=28;AF=0.500;AN=56;BaseQRankSum=-1.415;DP=503;FS=16.040;HRun=0;HaplotypeScore=93.8225;InbreedingCoeff=-0.6820;MQ=33.95;MQ0=70;MQRankSum=-3.778;QD=5.45;ReadPosRankSum=-3.560;VQSLOD=-0.1485;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,4:19:71.33:273,0,71	0/0:7,0:6:11.09:0,11,114	0/1:21,0:2:0:0,0,0	0/0:39,0:3:2.05:0,2,7	0/1:27,1:26:77.65:78,0,336	0/1:17,0:16:24.01:24,0,205	0/1:12,1:12:58.09:58,0,211	0/1:22,1:16:51.34:51,0,312	0/1:10,3:13:45.19:126,0,45	0/1:16,4:15:99:214,0,243	0/1:13,4:16:99:161,0,195	1/1:3,5:8:10.28:141,10,0	0/1:13,1:13:79.82:138,0,80	0/1:5,0:5:7.07:7,0,35	0/1:19,1:20:75.46:75,0,159	0/1:9,2:13:99:124,0,135	0/1:18,2:15:57.02:143,0,57	0/1:15,4:12:27.30:108,0,27	0/1:16,0:13:5.79:6,0,268	0/1:19,3:23:82.89:83,0,502	0/1:8,2:9:27.10:137,0,27	0/1:8,3:12:30.62:151,0,31	0/1:13,0:10:58.60:59,0,117	1/1:7,1:6:10.14:103,10,0	0/1:11,3:14:83.60:84,0,175	0/1:24,1:22:91.91:92,0,220	0/1:17,2:19:48.51:49,0,219	0/1:19,3:16:99:125,0,423
chr10	72781742	.	CCA	C	556.07	PASS	AB=0.993;AC=24;AF=0.429;AN=56;BaseQRankSum=3.495;DP=508;FS=9.006;HRun=0;HaplotypeScore=83.3537;InbreedingCoeff=-0.3289;MQ=34.31;MQ0=68;MQRankSum=-2.555;QD=1.59;ReadPosRankSum=-1.867;VQSLOD=0.4190;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:20:47.98:48,0,77	0/0:8,0:6:6.40:0,6,72	0/0:25,0:2:2.92:0,3,18	0/0:47,0:3:0.47:0,0,1	0/1:28,0:27:12.75:13,0,196	0/0:17,0:16:8.84:0,9,108	0/1:13,0:12:32.43:32,0,130	0/0:23,0:16:11.01:0,11,257	0/1:13,0:13:16.99:17,0,34	0/1:19,0:15:35.48:35,0,182	0/1:14,1:14:55.15:55,0,193	1/1:8,0:8:11.45:62,11,0	0/1:14,0:13:44.58:61,0,45	0/1:5,0:5:3.64:9,0,4	0/1:21,0:20:32.37:32,0,89	0/1:14,0:14:15.19:15,0,100	0/1:20,0:15:30.73:31,0,109	0/1:20,0:13:10.81:43,0,11	0/0:16,0:12:26.41:0,26,215	0/1:23,0:22:5.06:5,0,352	0/1:9,0:8:14.35:38,0,14	1/1:13,0:13:5.72:58,6,0	0/1:15,0:13:36.43:36,0,85	1/1:6,1:5:9.81:72,10,0	0/1:15,0:15:4.99:5,0,217	0/1:27,2:23:39.37:39,0,164	0/0:23,0:21:5.26:0,5,230	0/1:23,0:16:5.72:6,0,259
chr10	72781854	.	GACAC	G	1251.71	PASS	AB=0.728;AC=8;AF=0.143;AN=56;BaseQRankSum=3.565;DP=560;FS=14.721;HRun=0;HaplotypeScore=102.9758;InbreedingCoeff=0.5439;MQ=60.36;MQ0=12;MQRankSum=0.958;QD=14.06;ReadPosRankSum=0.067;VQSLOD=2.0746;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:6:0,6,79	0/0:9,0:9:9.03:0,9,192	0/0:19,0:11:3.01:0,3,64	0/0:28,0:15:2.99:0,3,23	0/0:20,0:20:36.10:0,36,735	0/0:18,0:18:9.76:0,10,429	0/0:27,0:27:32.81:0,33,534	0/0:22,0:21:18.06:0,18,382	0/0:27,0:27:42.02:0,42,797	1/1:11,5:15:14.94:164,15,0	1/1:11,6:17:18.06:281,18,0	0/0:10,0:21:12.04:0,12,208	0/0:19,0:18:24.06:0,24,420	0/1:8,1:10:27.43:39,0,27	0/0:21,0:23:38.58:0,39,746	0/0:15,0:18:29.57:0,30,550	0/1:11,16:28:35.27:606,0,35	0/0:16,0:16:21.96:0,22,386	0/0:19,0:20:24.17:0,24,358	0/0:20,0:22:41.26:0,41,666	0/0:19,0:22:32.82:0,33,574	0/0:13,0:13:6.02:0,6,104	0/0:22,0:21:9.03:0,9,185	0/0:14,0:15:12.01:0,12,191	1/1:8,9:18:21.06:312,21,0	0/0:22,0:20:33.03:0,33,584	0/0:19,0:20:26.60:0,27,439	0/0:13,0:12:20.91:0,21,290
chr10	72786884	.	TACACACAC	T	954.63	PASS	AB=0.901;AC=10;AF=0.200;AN=50;BaseQRankSum=5.525;DP=464;FS=6.074;HRun=0;HaplotypeScore=122.0494;InbreedingCoeff=0.6918;MQ=59.77;MQ0=7;MQRankSum=-5.680;QD=13.45;ReadPosRankSum=-1.133;VQSLOD=2.1885;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:17:46.69:47,0,60	./.	./.	./.	0/0:11,0:13:30.09:0,30,929	0/0:21,0:21:30.10:0,30,1184	0/0:21,0:21:27.09:0,27,839	0/0:19,0:19:16.61:0,17,341	0/0:16,0:16:21.04:0,21,709	0/0:11,0:11:21.06:0,21,603	0/0:16,0:16:18.06:0,18,651	1/1:4,5:9:15.05:376,15,0	1/1:10,4:14:12.04:301,12,0	0/0:17,0:17:24.08:0,24,710	0/0:24,0:24:39.13:0,39,1348	0/0:23,0:22:33.10:0,33,1109	0/0:25,0:26:42.14:0,42,1478	0/0:13,0:15:19.31:0,19,642	0/0:11,0:11:6.02:0,6,90	0/0:11,0:17:8.08:0,8,180	0/0:35,0:35:49.86:0,50,1751	1/1:4,2:5:6.02:150,6,0	1/1:4,3:7:9.03:225,9,0	0/1:15,3:18:0:0,0,0	0/0:14,0:14:18.06:0,18,686	0/0:18,0:18:18.06:0,18,630	0/0:15,0:21:15:0,15,160	0/0:4,0:3:3.01:0,3,123
chr10	72787290	.	T	TA	261	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=5.924;DP=488;FS=4.039;HRun=10;HaplotypeScore=49.6370;InbreedingCoeff=0.7015;MQ=62.01;MQ0=1;MQRankSum=-1.325;QD=7.91;ReadPosRankSum=1.321;VQSLOD=1.4246;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:55.96:355,56,0	0/0:6,0:6:17.95:0,18,143	0/1:10,0:9:2.62:3,0,82	0/0:9,0:6:14.19:0,14,103	0/0:22,0:22:59.93:0,60,492	0/0:20,0:20:52.96:0,53,423	0/0:11,0:11:32.96:0,33,270	0/0:27,1:28:39.56:0,40,469	0/0:10,0:10:26.97:0,27,222	0/0:33,0:33:77.86:0,78,638	0/0:34,3:37:34.91:0,35,699	0/0:10,0:10:26.91:0,27,215	0/0:15,0:15:32.95:0,33,271	0/0:8,0:8:20.96:0,21,172	0/0:23,0:23:56.91:0,57,466	0/0:16,0:17:43.97:0,44,348	0/0:29,0:28:68.87:0,69,562	0/0:12,0:12:26.95:0,27,222	0/0:23,0:23:53.90:0,54,440	0/0:25,0:25:65.89:0,66,540	0/0:8,0:8:14.97:0,15,123	0/0:6,0:6:14.98:0,15,123	0/0:17,0:17:41.92:0,42,342	0/0:8,0:8:17.98:0,18,148	0/0:23,0:23:62.91:0,63,515	0/0:17,0:17:44.92:0,45,366	0/0:20,0:20:52.89:0,53,411	0/0:18,0:18:47.93:0,48,394
chr10	72787298	.	A	AG	697.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.373;DP=518;FS=1.816;HRun=0;HaplotypeScore=49.1281;InbreedingCoeff=0.9629;MQ=62.99;MQ0=1;MQRankSum=-0.703;QD=31.72;ReadPosRankSum=3.590;VQSLOD=3.6584;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:57.19:793,57,0	0/0:7,0:7:21.06:0,21,275	0/0:10,0:9:20.74:0,21,204	0/0:9,0:6:15:0,15,166	0/0:22,0:22:66.20:0,66,882	0/0:19,0:19:54.09:0,54,726	0/0:12,0:12:33.11:0,33,456	0/0:30,0:30:82.75:0,83,1025	0/0:11,0:11:33.09:0,33,429	0/0:37,0:37:99:0,105,1337	0/0:38,0:38:96.69:0,97,1369	0/0:10,0:10:30.07:0,30,394	0/0:14,0:14:42.08:0,42,530	0/0:10,0:10:30.07:0,30,371	0/0:23,0:23:69.20:0,69,904	0/0:18,0:18:51.07:0,51,657	0/0:28,0:28:78.23:0,78,1035	0/0:13,0:13:30.09:0,30,400	0/0:22,0:22:63.11:0,63,814	0/0:29,0:29:81.23:0,81,1051	0/0:8,0:8:24.05:0,24,288	0/0:8,0:8:18.05:0,18,236	0/0:20,0:20:54.11:0,54,685	0/0:9,0:9:24.06:0,24,304	0/0:26,0:26:69.22:0,69,930	0/0:19,0:19:57.16:0,57,738	0/0:23,0:23:66.17:0,66,836	0/0:21,0:21:63.11:0,63,785
chr10	72787873	.	AG	A	408.68	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.045;DP=700;FS=1.102;HRun=1;HaplotypeScore=67.5488;InbreedingCoeff=0.9047;MQ=86.53;MQ0=0;MQRankSum=-2.196;QD=31.44;ReadPosRankSum=2.253;VQSLOD=3.4288;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.33:0,96,1532	0/0:10,0:10:30.10:0,30,479	0/0:25,0:25:75.25:0,75,1139	0/0:27,0:27:81.27:0,81,1248	0/0:36,0:36:99:0,108,1703	0/0:34,0:34:99:0,99,1526	0/0:16,0:16:48.15:0,48,744	0/0:42,0:42:99:0,123,1840	0/0:30,0:30:90.29:0,90,1412	0/0:38,0:38:99:0,114,1823	0/0:16,0:16:45.15:0,45,719	0/0:22,0:22:63.21:0,63,1006	0/0:23,0:23:69.24:0,69,1102	0/0:29,0:29:87.28:0,87,1365	0/0:41,0:41:99:0,123,1918	0/0:15,0:15:45.15:0,45,719	0/0:23,0:23:69.21:0,69,1077	1/1:0,13:13:36.12:503,36,0	0/0:34,0:34:99:0,102,1603	0/0:27,0:27:81.28:0,81,1294	0/0:26,0:26:75.26:0,75,1199	0/0:12,0:12:36.12:0,36,575	0/0:25,0:25:72.25:0,72,1151	0/0:17,0:17:51.17:0,51,815	0/0:23,0:23:69.24:0,69,1100	0/0:34,0:34:99:0,99,1557	0/0:27,0:27:81.28:0,81,1289	0/0:2,0:2:6.02:0,6,96
chr10	72788040	.	TACTA	T	6161.95	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.854;DP=725;FS=2.772;HRun=0;HaplotypeScore=120.3883;InbreedingCoeff=0.9993;MQ=88.21;MQ0=0;MQRankSum=-3.740;QD=44.98;ReadPosRankSum=4.090;VQSLOD=5.5717;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,3355	0/0:8,0:8:24.08:0,24,637	0/0:27,0:27:72.25:0,72,1734	0/0:28,0:28:78.26:0,78,1777	0/0:32,0:32:93.32:0,93,2425	0/0:25,0:25:75.24:0,75,1923	0/0:26,0:26:78.27:0,78,1993	0/0:31,0:31:81.28:0,81,2136	0/0:32,0:32:84.29:0,84,2185	0/0:34,0:34:96.32:0,96,2429	0/0:27,0:27:78.27:0,78,2032	1/1:1,23:23:63.22:1158,63,0	1/1:0,30:27:69:1287,69,0	0/0:26,0:26:78.27:0,78,2013	0/0:38,0:38:99:0,111,2917	0/0:21,0:21:63.22:0,63,1669	0/0:24,0:24:66.23:0,66,1693	0/0:12,0:12:33.11:0,33,856	0/0:21,0:21:60.21:0,60,1574	0/0:22,0:22:60.21:0,60,1599	0/0:11,0:11:30.10:0,30,797	1/1:0,22:22:60.21:1103,60,0	1/1:0,28:29:69.24:1271,69,0	1/1:1,30:31:72.72:1344,73,0	0/0:13,0:13:39.13:0,39,1040	0/0:30,0:30:84.29:0,84,2238	0/0:35,0:35:99:0,105,2694	0/0:19,0:19:57.20:0,57,1520
chr10	72788943	.	TCCCCCCTACCCTTCAGTTGCATGGAAAGTCTGGTTATTAGAG	T	2199.57	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.229;DP=452;FS=4.122;HRun=0;HaplotypeScore=317.7347;InbreedingCoeff=0.9027;MQ=73.82;MQ0=16;MQRankSum=0.425;QD=33.33;ReadPosRankSum=-0.667;VQSLOD=1.7269;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:24:55.43:1040,55,0	0/0:7,0:5:9:0,9,125	0/0:27,0:16:48.01:0,48,616	0/0:26,0:15:34.52:0,35,335	0/0:21,0:20:45.15:0,45,891	0/0:13,0:11:14.98:0,15,315	0/0:24,0:21:50.70:0,51,782	0/0:19,0:15:37.37:0,37,613	0/0:14,0:14:29.84:0,30,594	0/0:16,0:15:39.11:0,39,741	0/0:16,0:8:15.52:0,16,326	1/1:13,0:9:24.08:443,24,0	1/1:9,0:7:20.81:383,21,0	0/0:16,0:16:17.87:0,18,314	0/0:25,0:25:53.74:0,54,1182	0/0:21,0:20:54.66:0,55,1158	0/0:21,0:16:42.02:0,42,789	0/0:9,0:8:18.06:0,18,281	0/0:14,0:8:21.07:0,21,538	0/0:15,0:10:30.10:0,30,572	0/0:24,0:23:43.39:0,43,868	0/0:3,12:13:2.49:0,2,6	1/1:9,0:6:12.04:268,12,0	1/1:9,0:8:14.98:234,15,0	0/0:6,0:5:15.05:0,15,297	0/0:11,0:11:30.10:0,30,591	0/0:18,0:16:51.16:0,51,1030	0/0:7,0:4:6.02:0,6,87
chr10	72789726	.	AAAGG	A	868.28	PASS	AB=0.944;AC=23;AF=0.479;AN=48;BaseQRankSum=1.733;DP=496;FS=12.064;HRun=0;HaplotypeScore=93.6783;InbreedingCoeff=0.6096;MQ=57.07;MQ0=7;MQRankSum=0.875;QD=4.06;ReadPosRankSum=-0.783;VQSLOD=0.5418;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:27.04:0,27,436	1/1:8,0:8:2.99:24,3,0	./.	./.	0/0:11,0:11:6.02:0,6,137	0/0:23,0:23:12.02:0,12,150	0/0:20,0:17:2.94:0,3,18	./.	0/0:17,0:17:6.01:0,6,96	1/1:14,1:15:5.97:89,6,0	1/1:14,0:14:5.99:50,6,0	1/1:29,0:29:6.02:87,6,0	1/1:30,0:30:15.03:185,15,0	0/0:14,0:14:9.03:0,9,176	1/1:12,2:14:3.01:45,3,0	0/1:16,1:17:35.60:36,0,80	1/1:17,0:17:6.01:67,6,0	1/1:12,0:12:8.93:82,9,0	0/0:16,0:15:6.01:0,6,68	0/0:25,0:25:12.02:0,12,143	0/0:22,0:22:9.01:0,9,106	1/1:11,0:11:8.96:106,9,0	1/1:10,0:10:5.93:44,6,0	1/1:37,0:37:20.92:222,21,0	./.	0/0:15,0:14:8.99:0,9,110	0/0:3,0:3:0.47:0,0,1	0/0:9,0:9:15.05:0,15,218
chr10	72791551	.	AAACTTT	A	1535.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.699;DP=746;FS=4.012;HRun=0;HaplotypeScore=160.5103;InbreedingCoeff=0.9996;MQ=85.39;MQ0=0;MQRankSum=-8.071;QD=51.18;ReadPosRankSum=-1.029;VQSLOD=3.5573;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:30:69.24:1630,69,0	0/0:18,0:18:48.16:0,48,1690	0/0:26,0:25:66.17:0,66,2024	0/0:30,0:30:84.28:0,84,2785	0/0:37,0:37:99:0,108,3808	0/0:18,0:18:54.19:0,54,1914	0/0:18,0:18:48.16:0,48,1618	0/0:26,0:26:66.23:0,66,2091	0/0:14,0:14:42.14:0,42,1498	0/0:30,0:30:87.30:0,87,3095	0/0:25,0:25:75.24:0,75,2469	0/0:33,0:33:96.32:0,96,3196	0/0:34,0:34:93.32:0,93,3224	0/0:23,0:23:63.21:0,63,2133	0/0:44,0:44:99:0,129,4478	0/0:36,0:36:99:0,105,3693	0/0:27,0:27:81.28:0,81,2867	0/0:11,0:11:33.11:0,33,1155	0/0:21,0:21:57.20:0,57,1949	0/0:29,0:29:84.29:0,84,2926	0/0:46,0:46:99:0,132,4392	0/0:26,0:26:75.24:0,75,2591	0/0:23,0:23:66.17:0,66,2193	0/0:27,0:27:81.28:0,81,2836	0/0:31,0:31:90.31:0,90,3088	0/0:22,0:22:66.23:0,66,2344	0/0:29,0:28:87.30:0,87,3079	0/0:12,0:12:36.12:0,36,1218
chr10	72791869	.	ATATC	A	7731.74	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.307;DP=800;FS=3.517;HRun=0;HaplotypeScore=138.9503;InbreedingCoeff=0.9996;MQ=92.33;MQ0=1;MQRankSum=-5.460;QD=40.06;ReadPosRankSum=5.317;VQSLOD=5.1527;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:33:72.20:1357,72,0	0/0:21,0:21:60.21:0,60,1610	0/0:42,0:42:99:0,120,3090	0/0:31,0:31:69.23:0,69,1948	0/0:27,0:27:81.28:0,81,2091	0/0:30,0:30:84.29:0,84,2271	0/0:28,0:28:81.26:0,81,2115	0/0:39,0:39:99:0,111,2895	0/0:35,0:35:99:0,102,2784	0/0:29,0:29:84.28:0,84,2238	0/0:24,0:24:66.23:0,66,1763	1/1:2,32:34:75.21:1415,75,0	1/1:1,27:28:69.19:1299,69,0	0/0:23,0:23:63.22:0,63,1681	0/0:38,0:38:99:0,111,2936	0/0:29,0:29:87.30:0,87,2339	0/0:23,0:23:63.22:0,63,1726	0/0:13,0:13:36.12:0,36,934	0/0:20,0:20:54.17:0,54,1353	0/0:37,0:37:99:0,105,2831	0/0:36,0:36:99:0,108,2856	1/1:5,35:39:75.26:1454,75,0	1/1:1,22:23:42.14:814,42,0	1/1:3,32:34:72.25:1393,72,0	0/0:18,0:18:54.19:0,54,1479	0/0:32,0:32:96.33:0,96,2631	0/0:22,0:22:66.23:0,66,1763	0/0:10,0:10:24.06:0,24,581
chr10	72792628	.	A	ATT	4568.49	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.941;DP=488;FS=3.346;HRun=0;HaplotypeScore=75.7247;InbreedingCoeff=0.9951;MQ=69.63;MQ0=0;MQRankSum=-4.115;QD=51.91;ReadPosRankSum=4.309;VQSLOD=5.4256;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,99,1612	0/0:5,0:5:15.05:0,15,245	0/0:15,0:14:39.11:0,39,592	0/0:10,0:9:24.07:0,24,368	0/0:30,0:30:90.31:0,90,1468	0/0:13,0:13:36.12:0,36,587	0/0:17,0:17:51.17:0,51,827	0/0:15,0:15:45.15:0,45,713	0/0:17,0:17:51.17:0,51,829	1/1:1,20:21:60.21:1074,60,0	1/1:0,18:18:54.19:993,54,0	0/0:12,0:12:36.12:0,36,585	0/0:13,0:13:39.13:0,39,634	0/0:18,0:18:54.18:0,54,878	0/0:20,0:20:54.15:0,54,852	0/0:16,0:16:48.16:0,48,781	1/1:0,17:18:48.16:863,48,0	1/1:0,15:16:45.15:821,45,0	0/0:16,0:16:48.16:0,48,782	0/0:27,0:27:81.25:0,81,1274	0/0:13,0:13:39.11:0,39,606	0/0:22,0:22:66.23:0,66,1074	0/0:10,0:10:30.10:0,30,484	0/0:13,0:13:39.13:0,39,624	1/1:0,15:15:45.15:818,45,0	0/0:31,1:32:41.92:0,42,1457	0/0:20,0:20:60.20:0,60,968	0/0:8,0:8:24.08:0,24,389
chr10	72793427	.	A	ATGATG	13504.87	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=0.174;DP=707;FS=3.319;HRun=0;HaplotypeScore=128.0274;InbreedingCoeff=0.9600;MQ=89.01;MQ0=0;MQRankSum=-6.960;QD=64.00;ReadPosRankSum=3.505;VQSLOD=5.8901;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,3111	0/0:6,0:6:18.06:0,18,376	0/0:34,0:34:87.30:0,87,1839	0/0:37,0:37:99:0,111,2320	0/0:20,0:20:54.19:0,54,1167	0/0:26,0:26:78.25:0,78,1648	0/0:29,0:29:87.28:0,87,1799	0/0:32,0:32:93.31:0,93,1977	0/0:20,0:20:57.20:0,57,1205	1/1:4,24:29:81.28:2487,81,0	1/1:4,14:20:33.11:1046,33,0	1/1:3,0:25:69.24:1709,69,0	1/1:2,0:24:54.19:1335,54,0	0/0:22,0:22:63.22:0,63,1336	0/0:27,0:27:81.25:0,81,1675	0/0:20,0:20:60.21:0,60,1282	1/1:3,25:30:69.24:2187,69,0	1/1:2,7:10:21.07:637,21,0	0/0:33,0:33:96.33:0,96,2027	0/0:21,0:21:60.21:0,60,1288	0/0:32,0:32:87.30:0,87,1888	1/1:2,0:9:12.04:312,12,0	1/1:4,0:18:42.12:1043,42,0	1/1:5,0:27:54.19:1326,54,0	1/1:3,16:19:45.15:1425,45,0	0/0:34,1:35:1.11:0,1,1920	0/0:35,0:35:99:0,99,2131	0/0:17,0:17:51.18:0,51,1107
chr10	72794497	.	GA	G	2803.90	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.462;DP=504;FS=3.398;HRun=2;HaplotypeScore=77.1748;InbreedingCoeff=0.9601;MQ=76.31;MQ0=0;MQRankSum=-8.516;QD=28.91;ReadPosRankSum=-2.716;VQSLOD=2.6715;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1679	0/0:3,0:3:9.03:0,9,135	0/0:14,0:14:36.39:0,36,537	0/0:8,0:8:21.07:0,21,310	0/0:10,0:10:30.10:0,30,449	0/0:6,0:6:15.05:0,15,224	0/0:41,0:41:99:0,123,1839	0/0:12,0:12:36.12:0,36,540	0/0:6,0:6:18.06:0,18,270	0/0:16,0:16:48.16:0,48,719	0/0:7,0:7:18.06:0,18,270	1/1:4,28:32:33.25:911,33,0	1/1:2,15:17:48.16:621,48,0	0/0:16,0:16:45.14:0,45,654	0/0:5,0:5:15.05:0,15,225	0/0:10,0:10:30.10:0,30,450	0/0:34,0:34:99:0,102,1483	0/0:38,0:38:99:0,111,1655	0/0:18,0:18:54.16:0,54,787	0/0:3,0:3:9.03:0,9,135	0/0:65,0:65:99:0,193,2837	1/1:0,16:16:45.15:578,45,0	1/1:0,8:8:24.08:311,24,0	1/1:5,19:24:48.09:556,48,0	0/0:13,0:13:39.13:0,39,583	0/0:21,0:21:60.19:0,60,880	0/0:7,0:7:21.04:0,21,291	0/0:16,0:16:48.16:0,48,719
chr10	72795990	.	T	TGAGA	1497.29	PASS	AB=0.792;AC=29;AF=0.580;AN=50;BaseQRankSum=0.280;DP=595;FS=4.281;HRun=0;HaplotypeScore=117.9655;InbreedingCoeff=0.3667;MQ=72.41;MQ0=7;MQRankSum=0.196;QD=4.35;ReadPosRankSum=-0.013;VQSLOD=1.8670;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:17.93:251,18,0	0/1:6,0:7:8.53:9,0,18	./.	./.	1/1:21,3:26:3.01:70,3,0	0/0:27,0:27:12.03:0,12,166	0/0:20,0:21:15.03:0,15,190	0/0:26,0:26:0.46:0,0,1	0/0:13,0:16:6:0,6,56	0/0:12,0:14:6.39:0,6,75	0/0:16,0:16:3.01:0,3,46	0/1:17,0:18:26.97:27,0,29	0/1:11,0:17:22.33:22,0,60	./.	0/0:16,0:18:8.59:0,9,203	0/0:21,0:23:15.03:0,15,191	0/1:16,0:29:28.69:29,0,96	1/1:11,0:16:5.49:24,5,0	1/1:15,0:14:6.02:134,6,0	1/1:26,0:25:3.47:26,3,0	1/1:23,0:23:12.02:175,12,0	1/1:23,0:23:5.35:34,5,0	1/1:20,0:20:12.04:233,12,0	0/1:13,0:22:0.47:0,0,101	1/1:13,3:17:3.01:70,3,0	1/1:20,0:20:16.85:212,17,0	1/1:20,9:34:16.20:273,16,0	1/1:3,2:5:3.48:71,3,0
chr10	72796139	.	AGTTTT	A	7547.05	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.277;DP=584;FS=0.370;HRun=0;HaplotypeScore=112.7862;InbreedingCoeff=0.9972;MQ=79.71;MQ0=1;MQRankSum=-6.952;QD=38.51;ReadPosRankSum=3.028;VQSLOD=4.9458;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.17:0,81,2097	0/0:12,0:12:33.11:0,33,884	0/0:24,0:22:55.74:0,56,1088	0/0:22,0:21:39.48:0,39,585	0/0:34,0:34:99:0,99,2588	0/0:23,0:23:66.21:0,66,1803	0/0:19,0:19:54.15:0,54,1399	0/0:41,0:41:96.28:0,96,2433	0/0:20,0:20:57.13:0,57,1274	1/1:1,20:21:57.15:1064,57,0	1/1:5,17:22:44.85:779,45,0	1/1:1,22:23:54.19:1115,54,0	1/1:0,18:18:30.10:619,30,0	0/0:17,0:17:45.13:0,45,1178	0/0:16,0:16:39.11:0,39,1058	0/0:26,0:26:78.22:0,78,1990	1/1:3,25:28:54.13:1073,54,0	1/1:2,13:15:27.09:558,27,0	0/0:16,0:14:45.13:0,45,1186	0/0:16,0:16:39.13:0,39,1082	0/0:15,0:15:42.13:0,42,1108	1/1:1,16:17:38.95:619,39,0	1/1:2,16:18:39.03:723,39,0	1/1:3,10:13:14.79:310,15,0	1/1:2,19:21:36.11:687,36,0	0/0:16,0:16:45.13:0,45,1038	0/0:27,0:27:78.18:0,78,2043	0/0:17,0:17:51.09:0,51,1075
chr10	72796805	.	CAAATAAATAAATAAATAAAT	C	4562.05	PASS	AB=1.000;AC=19;AF=0.380;AN=50;BaseQRankSum=7.778;DP=327;FS=0.702;HRun=0;HaplotypeScore=146.2022;InbreedingCoeff=0.7051;MQ=54.26;MQ0=3;MQRankSum=-4.675;QD=29.43;ReadPosRankSum=0.943;VQSLOD=4.0088;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:13:15.05:0,15,550	0/0:2,0:2:6.02:0,6,314	./.	./.	0/0:11,0:11:12.04:0,12,945	0/0:13,0:14:33.11:0,33,2744	0/0:10,0:10:21.07:0,21,1324	0/0:38,0:34:39.11:0,39,1139	./.	1/1:6,10:16:25.53:665,26,0	1/1:7,8:15:17.91:560,18,0	1/1:4,8:12:12.04:627,12,0	1/1:5,11:16:16.54:882,17,0	0/0:5,0:5:3.01:0,3,273	0/0:7,0:7:15.05:0,15,1093	0/0:8,0:8:15.05:0,15,917	1/1:15,22:37:15.05:777,15,0	0/1:19,0:19:84.24:333,0,84	0/0:5,0:5:12.04:0,12,736	0/0:4,0:4:6.02:0,6,348	0/0:8,0:8:9.03:0,9,684	1/1:6,0:6:6.02:104,6,0	1/1:4,2:6:3.01:132,3,0	1/1:7,9:16:2.90:161,3,0	1/1:4,8:12:6.02:322,6,0	0/0:9,0:9:21.07:0,21,1581	0/0:6,0:6:6.02:0,6,494	0/0:7,0:7:21.07:0,21,1733
chr10	72797333	.	TGGG	T	868.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.931;DP=374;FS=26.465;HRun=12;HaplotypeScore=58.1497;InbreedingCoeff=0.3664;MQ=73.58;MQ0=0;MQRankSum=-0.964;QD=21.17;ReadPosRankSum=6.013;VQSLOD=0.1745;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:21:11.97:0,12,108	0/0:3,0:3:3.01:0,3,40	0/0:12,0:11:8.45:0,8,177	0/0:12,0:11:15.01:0,15,162	0/0:5,0:5:6:0,6,68	0/0:8,0:10:10.22:0,10,73	0/0:16,0:19:30.48:0,30,372	0/0:10,0:10:6.02:0,6,100	0/0:11,0:11:9.03:0,9,152	0/0:5,0:7:5.36:0,5,31	0/0:4,0:5:3.01:0,3,45	0/0:12,0:12:18.05:0,18,257	0/0:13,0:14:15.04:0,15,215	0/0:20,0:20:15.05:0,15,240	0/0:20,0:20:24.08:0,24,381	0/0:24,0:25:42.06:0,42,613	0/0:19,0:22:34.23:0,34,360	1/1:8,31:41:76.42:961,76,0	0/0:2,0:2:5.99:0,6,69	0/0:5,0:5:5.98:0,6,69	0/0:23,0:23:18.06:0,18,311	0/0:7,0:7:3.01:0,3,45	0/0:1,0:1:3.01:0,3,46	0/0:19,0:21:21.04:0,21,283	0/0:13,0:14:14.94:0,15,142	0/0:7,0:7:0:0,0,0	0/0:18,0:19:21.07:0,21,325	0/0:4,0:6:6.02:0,6,88
chr10	72797899	.	AG	A	999.71	PASS	AB=0.944;AC=15;AF=0.268;AN=56;BaseQRankSum=2.877;DP=443;FS=0.599;HRun=12;HaplotypeScore=59.5973;InbreedingCoeff=0.4390;MQ=85.59;MQ0=0;MQRankSum=-0.059;QD=5.78;ReadPosRankSum=3.295;VQSLOD=1.6932;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,1:17:8.21:8,0,107	0/0:4,0:4:3.01:0,3,30	0/0:26,0:23:14.67:0,15,168	0/1:15,0:14:19.02:19,0,51	0/0:17,0:17:9.01:0,9,88	0/0:19,0:20:6.64:0,7,143	0/0:15,0:15:30.02:0,30,293	0/1:9,1:10:9.71:10,0,78	0/0:13,0:13:30.04:0,30,293	0/0:11,0:13:5.96:0,6,49	0/0:16,0:16:2.99:0,3,24	1/1:7,15:22:32.87:255,33,0	1/1:2,15:17:32.86:255,33,0	0/0:16,1:17:10.30:0,10,270	0/0:16,0:16:21.04:0,21,213	0/0:14,0:14:29.90:0,30,271	0/0:9,0:21:19.89:0,20,100	0/0:3,0:9:8.52:0,9,43	0/1:11,1:12:11.21:11,0,77	0/0:9,0:9:6.01:0,6,59	0/1:15,1:16:5.23:5,0,117	1/1:6,14:20:32.78:245,33,0	1/1:10,13:23:11.62:88,12,0	1/1:6,14:20:35.83:279,36,0	0/0:11,0:17:8.83:0,9,62	0/0:13,0:14:20.87:0,21,192	0/0:22,1:23:15.68:0,16,325	0/0:5,0:5:5.95:0,6,42
chr10	72798248	.	TTA	T	5642.25	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=12.268;DP=455;FS=1.214;HRun=0;HaplotypeScore=58.5651;InbreedingCoeff=0.9193;MQ=71.57;MQ0=1;MQRankSum=-2.851;QD=37.12;ReadPosRankSum=3.776;VQSLOD=6.4538;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:22.98:0,23,90	0/0:4,0:4:12.02:0,12,197	0/0:12,0:8:19.84:0,20,162	0/0:11,0:9:0.49:0,0,85	0/0:28,0:28:81.22:0,81,1386	0/0:15,0:15:45.14:0,45,811	0/0:11,0:11:33.09:0,33,570	0/0:35,0:35:99:0,102,1723	0/0:17,0:17:51.13:0,51,845	1/1:3,14:17:47.68:639,48,0	1/1:2,26:28:65.18:959,65,0	1/1:1,18:19:53.99:747,54,0	1/1:0,16:16:39.13:576,39,0	0/0:19,0:19:57.13:0,57,911	0/0:17,0:17:51.13:0,51,852	0/0:16,0:16:48.14:0,48,838	1/1:0,12:12:33.11:489,33,0	1/1:3,13:16:48.08:652,48,0	0/0:16,0:16:48.09:0,48,759	0/0:20,0:20:60.16:0,60,1030	0/0:8,0:8:24.06:0,24,397	1/1:1,14:15:45.01:613,45,0	1/1:6,4:10:0.59:285,1,0	1/1:0,10:10:27.07:380,27,0	1/1:3,6:8:23.86:301,24,0	0/0:19,1:20:18.36:0,18,1020	0/0:32,0:31:96.27:0,96,1725	0/0:9,0:9:27.09:0,27,519
chr10	72798249	.	TA	T	2011.49	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=15.109;DP=457;FS=1.230;HRun=8;HaplotypeScore=62.5422;InbreedingCoeff=0.9195;MQ=72.52;MQ0=1;MQRankSum=-1.206;QD=12.19;ReadPosRankSum=3.136;VQSLOD=2.6817;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,11:13:27.04:260,27,0	0/0:4,0:4:12.02:0,12,131	0/0:13,0:9:8.91:0,9,77	0/0:11,0:9:12.40:0,12,81	0/0:28,0:28:75.20:0,75,863	0/0:16,0:16:42.11:0,42,488	0/0:11,0:11:30.08:0,30,346	0/0:36,0:36:93.24:0,93,1060	0/0:17,0:17:48.10:0,48,531	1/1:16,0:16:45.68:234,46,0	1/1:28,0:28:57.04:305,57,0	1/1:19,0:19:52.11:283,52,0	1/1:17,0:17:40.52:222,41,0	0/0:19,0:19:51.11:0,51,567	0/0:17,0:17:45.11:0,45,515	0/0:16,0:16:42.09:0,42,485	1/1:12,0:12:31.85:171,32,0	1/1:16,0:16:42.33:224,42,0	0/0:15,0:15:42.09:0,42,468	0/0:20,0:20:57.15:0,57,651	0/0:8,0:8:18.06:0,18,215	1/1:14,1:15:37.78:210,38,0	0/1:10,0:10:6.13:71,0,6	1/1:10,0:10:26.16:148,26,0	1/1:9,0:8:19.99:102,20,0	0/0:19,0:19:44.06:0,44,632	0/0:33,0:32:93.24:0,93,1075	0/0:9,0:9:27.08:0,27,322
chr10	72798293	.	G	GT	1968.18	PASS	AB=0.926;AC=13;AF=0.232;AN=56;BaseQRankSum=-1.990;DP=499;FS=7.083;HRun=9;HaplotypeScore=83.9164;InbreedingCoeff=0.8822;MQ=76.76;MQ0=1;MQRankSum=-1.724;QD=18.39;ReadPosRankSum=-0.984;VQSLOD=3.3963;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:38.92:0,39,330	0/0:3,0:3:9:0,9,78	0/0:24,0:18:13.30:0,13,131	0/1:23,0:17:16.63:17,0,47	0/0:29,0:30:82.95:0,83,695	0/0:17,0:17:23.74:0,24,366	0/0:11,0:11:32.98:0,33,283	0/0:23,0:25:59.91:0,60,506	0/0:12,0:12:32.99:0,33,286	0/0:25,0:25:68.96:0,69,591	0/0:34,0:35:91.70:0,92,753	1/1:4,16:20:54.12:579,54,0	1/1:4,9:13:33.02:348,33,0	0/0:15,0:15:44.95:0,45,381	0/0:14,0:14:32.99:0,33,286	0/0:16,0:16:41.96:0,42,361	0/0:14,0:14:35.95:0,36,304	1/1:5,10:15:33.09:364,33,0	0/0:25,0:25:53.95:0,54,463	0/0:21,0:22:65.01:0,65,549	0/0:5,0:5:15:0,15,130	1/1:3,8:11:24.06:265,24,0	1/1:2,11:13:33.09:361,33,0	1/1:5,5:10:21.04:223,21,0	0/0:14,0:14:38.95:0,39,328	0/0:22,0:22:59.97:0,60,516	0/0:34,0:33:89.95:0,90,777	0/0:12,0:12:35.99:0,36,313
chr10	72798308	.	G	GCAAAA	4470.16	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-6.234;DP=543;FS=1.749;HRun=0;HaplotypeScore=119.0057;InbreedingCoeff=0.8370;MQ=76.17;MQ0=1;MQRankSum=-2.304;QD=36.34;ReadPosRankSum=0.538;VQSLOD=4.9426;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:8.34:0,8,689	0/0:4,0:4:9.03:0,9,168	0/0:33,0:21:26.63:0,27,303	0/1:34,0:22:17.89:18,0,74	0/0:32,0:32:84.27:0,84,1552	0/0:21,0:21:51.16:0,51,909	0/0:14,0:14:39.11:0,39,661	0/0:25,0:25:36.11:0,36,621	0/0:12,0:12:36.12:0,36,680	1/1:8,16:24:48.16:1337,48,0	1/1:16,18:34:66.22:1835,66,0	0/0:21,0:21:48.13:0,48,858	0/0:12,0:12:27.02:0,27,438	0/0:17,0:17:36.11:0,36,640	0/0:16,0:16:42.11:0,42,728	0/0:17,0:17:45.13:0,45,778	1/1:4,7:11:21.07:603,21,0	0/0:14,0:14:33.11:0,33,595	0/0:21,0:21:36.12:0,36,679	0/0:27,0:27:63.11:0,63,1083	0/0:8,0:8:20.97:0,21,313	0/0:12,0:12:30.09:0,30,534	0/0:17,0:17:42.14:0,42,776	0/0:9,0:9:21.07:0,21,397	1/1:6,9:19:24.08:676,24,0	0/0:21,0:21:45.13:0,45,762	0/0:29,0:28:66.22:0,66,1216	0/0:17,0:17:51.17:0,51,964
chr10	72798477	.	GATTTCTCTATTAGTC	G	4501.79	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.502;DP=516;FS=10.845;HRun=0;HaplotypeScore=208.9529;InbreedingCoeff=0.9915;MQ=79.93;MQ0=0;MQRankSum=-8.221;QD=97.87;ReadPosRankSum=0.941;VQSLOD=3.6665;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.16:0,48,3356	0/0:5,0:5:15.05:0,15,856	0/0:14,0:14:42.14:0,42,2067	0/0:14,0:14:36.09:0,36,1180	0/0:36,0:36:99:0,108,6967	0/0:19,0:19:57.20:0,57,3993	0/0:21,0:21:63.21:0,63,4199	0/0:40,0:40:99:0,114,7389	0/0:22,0:22:66.23:0,66,4539	1/1:1,14:15:42.09:1665,42,0	1/1:1,11:12:27.09:1083,27,0	0/0:12,0:12:36.12:0,36,2592	0/0:15,0:15:45.11:0,45,2969	0/0:25,0:25:75.26:0,75,5416	0/0:24,0:24:66.23:0,66,4656	0/0:23,0:23:69.23:0,69,4948	1/1:3,7:10:21.07:944,21,0	0/0:17,0:17:51.16:0,51,3520	0/0:20,0:20:51.17:0,51,3234	0/0:29,0:29:87.30:0,87,6070	0/0:17,0:17:48.16:0,48,3097	0/0:11,0:11:33.11:0,33,2238	0/0:14,0:14:39.09:0,39,2389	0/0:11,0:11:33.11:0,33,2316	1/1:1,8:8:18.06:809,18,0	0/0:26,0:26:78.27:0,78,5545	0/0:29,0:29:81.25:0,81,5486	0/0:10,0:10:30.10:0,30,2035
chr10	72798800	.	T	TTCAGGTTCTC	2307.33	PASS	AB=0.750;AC=43;AF=0.977;AN=44;BaseQRankSum=-1.832;DP=45;FS=11.579;HRun=0;HaplotypeScore=18.2233;InbreedingCoeff=-0.1882;MQ=99.81;MQ0=0;MQRankSum=-2.633;QD=51.27;ReadPosRankSum=0.114;VQSLOD=1.3887;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:3:25,3,0	1/1:1,0:1:3.01:92,3,0	1/1:3,1:6:14.05:366,14,0	0/1:6,0:8:72.88:381,0,73	1/1:1,0:1:3.01:106,3,0	1/1:1,0:1:3.01:92,3,0	1/1:2,0:2:5.98:126,6,0	1/1:3,0:3:6.01:103,6,0	1/1:2,0:2:3.01:106,3,0	1/1:2,0:2:6.02:167,6,0	1/1:1,0:1:3.01:106,3,0	./.	1/1:1,0:1:2.97:20,3,0	1/1:1,0:1:2.99:24,3,0	1/1:1,0:1:2.97:20,3,0	1/1:1,0:1:2.97:20,3,0	./.	1/1:2,0:2:3.01:81,3,0	1/1:1,0:1:3.01:108,3,0	./.	1/1:2,0:2:5.99:96,6,0	./.	1/1:1,0:1:3.01:133,3,0	1/1:1,0:1:3.01:44,3,0	1/1:1,0:1:3.01:107,3,0	./.	./.	1/1:1,0:1:3.01:71,3,0
chr10	72799335	.	C	CT	4263.63	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-9.656;DP=568;FS=3.279;HRun=9;HaplotypeScore=61.9407;InbreedingCoeff=0.9327;MQ=75.85;MQ0=0;MQRankSum=-2.489;QD=23.30;ReadPosRankSum=1.839;VQSLOD=5.8817;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:56.96:0,57,488	0/0:15,0:15:35.96:0,36,312	0/0:23,0:21:7.35:0,7,202	0/0:14,0:13:21.72:0,22,160	0/0:25,0:25:67.94:0,68,567	0/0:25,0:26:67.98:0,68,572	0/0:10,0:10:29.95:0,30,251	0/0:29,0:29:74.88:0,75,629	0/0:15,0:15:38.99:0,39,339	1/1:4,22:26:69.10:741,69,0	1/1:5,18:23:1.97:463,2,0	1/1:3,6:9:24.04:252,24,0	1/1:1,17:18:39.11:431,39,0	0/0:14,0:14:34.78:0,35,286	0/0:32,0:32:86.92:0,87,744	0/0:25,1:26:41.79:0,42,588	1/1:3,26:29:54.15:597,54,0	1/1:5,21:26:57.15:630,57,0	0/0:18,0:18:44.97:0,45,385	0/0:15,1:16:11.78:0,12,323	0/0:10,0:10:26.99:0,27,234	1/1:2,6:8:15:153,15,0	1/1:4,15:19:39.11:431,39,0	1/1:2,9:11:24.06:265,24,0	1/1:4,10:14:27.07:299,27,0	0/0:14,1:15:5.80:0,6,277	0/0:35,0:35:95.88:0,96,813	0/0:37,1:38:99:0,101,863
chr10	72799665	.	CT	C	3032.33	PASS	AB=0.826;AC=22;AF=0.393;AN=56;BaseQRankSum=9.861;DP=516;FS=5.297;HRun=12;HaplotypeScore=54.9418;InbreedingCoeff=0.8503;MQ=69.90;MQ0=1;MQRankSum=-0.234;QD=14.79;ReadPosRankSum=1.722;VQSLOD=4.4304;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:39.03:0,39,381	0/1:6,1:7:2.20:2,0,162	0/0:13,1:11:15.96:0,16,118	0/0:7,0:7:11.78:0,12,85	0/0:23,4:27:27.58:0,28,534	0/0:19,0:21:28.51:0,29,405	0/1:5,2:7:28.44:28,0,104	0/0:39,0:39:81.11:0,81,806	0/0:12,0:12:24.03:0,24,232	1/1:3,19:22:56.01:425,56,0	1/1:2,21:24:61.75:465,62,0	1/1:1,15:17:40.88:307,41,0	1/1:2,9:13:27.98:197,28,0	0/0:14,1:15:15.85:0,16,342	0/0:15,0:15:27.03:0,27,261	0/0:22,1:23:36.84:0,37,544	1/1:3,8:11:22.94:168,23,0	1/1:2,16:18:35.82:277,36,0	0/0:28,1:29:24.85:0,25,425	0/0:11,1:12:9.82:0,10,276	0/0:10,0:10:23.94:0,24,229	1/1:2,11:13:29.87:232,30,0	1/1:5,21:26:32.31:434,32,0	1/1:3,13:16:35.82:279,36,0	1/1:2,27:30:9.93:432,10,0	0/0:27,0:27:42.07:0,42,421	0/0:25,3:28:14.11:0,14,494	0/0:11,0:11:21.04:0,21,213
chr10	72799788	.	ATG	A	429	PASS	AB=0.972;AC=20;AF=0.417;AN=48;BaseQRankSum=5.101;DP=462;FS=11.357;HRun=0;HaplotypeScore=69.6649;InbreedingCoeff=0.2732;MQ=65.92;MQ0=15;MQRankSum=0.659;QD=2.09;ReadPosRankSum=2.793;VQSLOD=0.5682;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:27:8.52:42,9,0	./.	./.	0/0:38,0:20:0:0,0,0	0/0:15,0:15:2.99:0,3,24	0/0:18,0:18:20.26:0,20,236	0/1:16,0:17:2.34:2,0,102	0/0:26,0:26:2.98:0,3,21	0/0:10,0:10:3.01:0,3,44	0/1:13,0:13:7.78:8,0,15	./.	0/1:15,0:15:14.99:34,0,15	1/1:6,0:6:2.84:14,3,0	0/0:7,0:7:3.01:0,3,35	0/1:17,1:18:72.27:72,0,133	0/0:14,0:14:15.05:0,15,218	1/1:16,0:18:13.56:83,14,0	0/1:13,0:13:7.65:8,0,17	0/0:19,0:19:9:0,9,81	./.	0/0:29,0:29:21.03:0,21,235	1/1:6,3:9:5.88:64,6,0	1/1:14,0:14:2.77:22,3,0	1/1:17,3:18:12.03:129,12,0	1/1:13,0:15:14.21:85,14,0	0/1:14,0:13:19.61:20,0,171	0/0:17,0:17:17.78:0,18,203	0/0:11,0:11:3.01:0,3,44
chr10	72799834	.	GTGTA	G	462.26	PASS	AB=0.958;AC=12;AF=0.214;AN=56;BaseQRankSum=5.483;DP=395;FS=21.687;HRun=0;HaplotypeScore=86.2675;InbreedingCoeff=-0.1420;MQ=56.70;MQ0=14;MQRankSum=-1.774;QD=3.12;ReadPosRankSum=-0.761;VQSLOD=0.2045;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,3:30:99:144,0,167	1/1:5,0:5:1.76:5,2,0	0/0:23,0:7:17.79:0,18,126	0/0:22,0:9:20.91:0,21,161	0/1:13,0:13:6.60:7,0,90	0/0:14,0:14:27.05:0,27,483	0/0:19,0:19:12.95:0,13,342	0/0:10,0:10:16.91:0,17,179	0/0:13,0:13:6.48:0,6,206	0/1:8,0:8:9.11:9,0,109	0/0:4,0:4:4.81:0,5,30	0/1:8,0:7:33.19:33,0,108	0/1:8,1:9:48:48,0,81	0/0:6,0:6:11.25:0,11,112	0/0:17,0:18:26.16:0,26,512	0/0:16,0:16:37.92:0,38,668	0/1:19,3:20:65.35:228,0,65	0/0:15,0:13:5.95:0,6,140	0/0:12,0:12:10.72:0,11,268	0/1:11,1:12:1.47:1,0,30	0/0:28,0:27:48.22:0,48,693	0/0:8,1:9:9.01:0,9,103	0/1:6,0:5:17.84:18,0,19	0/1:22,0:19:2.23:2,0,161	0/1:10,0:10:13.22:100,0,13	0/0:13,0:13:3.16:0,3,575	0/0:18,0:16:16.09:0,16,396	0/0:6,0:6:15.42:0,15,178
chr10	72799847	.	GGA	G	468.95	PASS	AB=0.971;AC=12;AF=0.222;AN=54;BaseQRankSum=2.557;DP=390;FS=9.986;HRun=0;HaplotypeScore=73.9769;InbreedingCoeff=0.0487;MQ=57.08;MQ0=21;MQRankSum=-0.771;QD=3.35;ReadPosRankSum=0.172;VQSLOD=1.0293;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,7:33:41.05:414,41,0	0/0:4,0:4:3.43:0,3,47	0/0:25,0:8:3.01:0,3,35	./.	0/0:13,0:13:9.40:0,9,168	0/0:14,0:13:18.49:0,18,196	0/0:18,0:19:10.40:0,10,263	0/0:12,0:12:18.02:0,18,221	0/1:12,0:12:10.49:10,0,280	0/0:10,0:10:1.37:0,1,48	0/0:7,0:5:3:0,3,26	0/0:6,0:5:2.12:0,2,31	0/1:9,0:9:11.55:12,0,42	0/1:5,0:5:22.59:23,0,114	0/0:19,0:19:26.89:0,27,330	0/1:13,3:16:14.78:15,0,217	0/0:21,0:18:8.94:0,9,66	0/1:12,0:11:3.88:4,0,27	0/1:11,1:12:46.62:47,0,95	1/1:2,7:8:6.02:69,6,0	0/0:24,0:23:29.25:0,29,399	0/0:6,0:6:0:0,0,0	0/0:5,0:5:2.98:0,3,22	0/1:22,0:20:3.50:4,0,148	0/0:10,0:9:0:0,0,0	0/0:13,0:13:19.12:0,19,317	0/0:16,0:15:15.46:0,15,232	0/1:9,0:5:9.57:10,0,95
chr10	72799876	.	A	AAG	430.61	PASS	AB=0.916;AC=15;AF=0.268;AN=56;BaseQRankSum=4.917;DP=452;FS=23.193;HRun=0;HaplotypeScore=80.7285;InbreedingCoeff=0.3770;MQ=53.62;MQ0=17;MQRankSum=-1.005;QD=2.81;ReadPosRankSum=0.368;VQSLOD=0.3485;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:43.80:0,44,423	0/0:5,0:5:8.69:0,9,87	0/0:20,0:7:13.84:0,14,135	0/0:32,0:6:14.75:0,15,127	0/1:11,7:18:23.02:106,0,23	0/0:13,0:13:24.07:0,24,285	0/0:11,0:14:23.75:0,24,262	0/0:30,0:30:44.82:0,45,460	0/0:11,0:11:18.03:0,18,198	0/1:15,0:15:8.66:37,0,9	1/1:18,0:16:4.23:65,4,0	0/1:11,0:10:7.59:27,0,8	0/1:8,0:9:5.89:38,0,6	0/0:9,0:9:21.06:0,21,249	0/0:17,0:17:36.05:0,36,416	0/0:17,0:17:26.58:0,27,292	1/1:20,0:19:2.47:44,2,0	0/0:13,0:12:2.75:0,3,13	0/0:13,0:14:29.91:0,30,313	0/0:13,0:12:18:0,18,184	0/0:14,0:13:24.54:0,25,286	1/1:3,0:3:0.47:1,0,0	1/1:10,0:10:6.47:56,6,0	0/1:23,0:23:9.13:163,0,9	1/1:23,0:22:1.64:43,2,0	0/0:16,0:16:33.08:0,33,369	0/0:14,0:14:21.06:0,21,250	0/0:10,0:9:20.71:0,21,196
chr10	72799989	.	A	AAT	309.84	PASS	AB=0.980;AC=5;AF=0.089;AN=56;BaseQRankSum=-2.584;DP=396;FS=2.278;HRun=0;HaplotypeScore=50.1365;InbreedingCoeff=0.3099;MQ=70.63;MQ0=0;MQRankSum=1.163;QD=5.74;ReadPosRankSum=-1.958;VQSLOD=1.9725;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,12:20:7.21:369,7,0	0/0:9,0:9:23.91:0,24,271	0/1:9,0:8:32.60:33,0,41	0/1:8,0:8:4.32:4,0,8	0/0:23,0:24:30.06:0,30,558	0/0:14,0:14:42.10:0,42,481	0/0:7,0:10:20.90:0,21,235	0/0:40,0:41:89.90:0,90,986	0/0:9,0:9:21.07:0,21,257	0/0:12,0:13:29.93:0,30,345	0/0:10,0:10:21.07:0,21,257	0/0:10,0:10:24.06:0,24,273	0/0:13,0:13:24:0,24,252	0/0:4,0:4:9.03:0,9,110	0/0:13,0:13:21.07:0,21,256	0/0:12,0:13:38.86:0,39,393	0/0:21,0:21:57.16:0,57,676	0/0:15,0:15:32.85:0,33,347	0/0:14,0:15:32.93:0,33,373	0/0:14,0:15:38.89:0,39,436	0/1:15,1:16:9.53:10,0,391	0/0:3,0:3:9.03:0,9,110	0/0:17,0:19:36.59:0,37,495	0/0:7,0:7:6.02:0,6,74	0/0:23,0:23:57.18:0,57,699	0/0:14,0:14:27.07:0,27,311	0/0:14,0:15:33.10:0,33,404	0/0:11,0:11:30.09:0,30,367
chr10	72800477	.	C	CTT	2658	PASS	AB=0.923;AC=22;AF=0.393;AN=56;BaseQRankSum=3.663;DP=446;FS=6.505;HRun=14;HaplotypeScore=88.3666;InbreedingCoeff=0.6863;MQ=73.97;MQ0=3;MQRankSum=-3.366;QD=14.52;ReadPosRankSum=-4.078;VQSLOD=1.7119;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,1:43:66.79:0,67,553	0/0:8,0:8:11.92:0,12,100	0/0:23,0:15:2.92:0,3,124	0/0:25,0:12:5.63:0,6,39	0/0:10,0:11:17.40:0,17,137	0/0:5,0:14:19.07:0,19,82	0/0:17,0:18:23.69:0,24,239	0/0:23,0:25:5.42:0,5,169	0/0:16,0:17:14.38:0,14,153	1/1:13,2:16:24.35:243,24,0	1/1:11,5:17:33.16:344,33,0	1/1:5,5:12:14.41:162,14,0	1/1:3,9:12:21.04:256,21,0	0/0:11,0:11:8.03:0,8,73	0/0:9,0:9:5.65:0,6,50	0/0:21,0:21:17.44:0,17,150	1/1:24,10:37:88.21:863,88,0	1/1:13,4:18:35.39:378,35,0	0/1:14,0:14:27.83:28,0,82	0/0:9,0:9:17.81:0,18,150	0/0:6,0:6:8.95:0,9,72	1/1:3,4:8:8.39:83,8,0	1/1:5,3:9:3.01:40,3,0	1/1:3,4:9:8.39:87,8,0	1/1:16,3:19:33.03:356,33,0	0/1:9,1:11:21.41:21,0,149	0/0:12,0:13:5.49:0,5,91	0/0:9,0:10:26.69:0,27,212
chr10	72800495	.	G	GT	1082.73	PASS	AB=0.833;AC=8;AF=0.143;AN=56;BaseQRankSum=2.574;DP=453;FS=7.846;HRun=11;HaplotypeScore=65.6119;InbreedingCoeff=0.6401;MQ=73.71;MQ0=2;MQRankSum=-3.661;QD=9.02;ReadPosRankSum=0.246;VQSLOD=2.1429;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:40:51.83:0,52,161	0/0:6,0:6:8.95:0,9,69	0/1:39,0:24:18.26:18,0,178	0/0:27,0:11:16.56:0,17,86	0/0:14,1:15:11.77:0,12,262	0/0:17,0:17:35.80:0,36,276	0/0:13,0:13:23.88:0,24,183	0/0:25,0:26:35.74:0,36,276	0/0:13,0:13:29.71:0,30,220	0/1:6,5:12:1.35:152,0,1	1/1:9,4:13:5.15:129,5,0	0/0:12,0:12:17.88:0,18,137	0/0:14,0:14:8.32:0,8,97	0/0:8,0:8:11.88:0,12,86	0/0:12,0:12:26.84:0,27,209	0/0:17,0:17:44.80:0,45,346	1/1:16,21:36:31.55:643,32,0	0/0:10,0:17:18.01:0,18,53	0/0:12,0:14:28.91:0,29,214	0/0:10,0:10:20.88:0,21,160	0/0:4,0:4:8.95:0,9,70	0/0:7,0:7:11.17:0,11,77	0/0:9,0:9:14.74:0,15,114	0/0:8,0:8:8.95:0,9,70	1/1:5,14:19:9.83:281,10,0	0/0:17,0:17:29.49:0,29,212	0/0:16,0:17:40.82:0,41,303	0/0:9,0:9:14.93:0,15,116
chr10	72801570	.	CGTGTGT	C	527.02	PASS	AC=12;AF=0.273;AN=44;BaseQRankSum=5.512;DP=547;FS=5.826;HRun=0;HaplotypeScore=126.9882;InbreedingCoeff=0.7119;MQ=60.21;MQ0=12;MQRankSum=-3.434;QD=4.88;ReadPosRankSum=1.325;VQSLOD=2.0056;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:18:0:0,0,0	0/0:9,0:9:8.91:0,9,239	./.	./.	0/0:13,0:12:3.01:0,3,61	0/0:19,0:18:15.05:0,15,457	0/0:32,0:36:27.09:0,27,667	./.	0/0:15,0:14:9.03:0,9,213	1/1:11,0:12:3.01:42,3,0	./.	1/1:15,1:18:6.90:121,7,0	1/1:14,2:18:15.64:192,16,0	0/0:19,0:19:18.04:0,18,393	0/0:14,0:15:15.05:0,15,400	0/0:12,0:15:21.07:0,21,527	1/1:18,5:22:8.55:152,9,0	1/1:12,1:22:7.80:70,8,0	0/0:19,0:18:6.02:0,6,113	0/0:11,0:10:9.03:0,9,210	0/0:89,0:89:41.69:0,42,1530	./.	./.	0/0:27,8:35:0:0,0,0	1/1:6,7:14:6.41:95,6,0	0/0:18,0:20:21.05:0,21,369	0/0:10,0:10:15.05:0,15,410	0/0:12,0:13:8.99:0,9,155
chr10	72802057	.	CCAGCACTTGGA	C	14131.42	PASS	AB=0.571;AC=19;AF=0.339;AN=56;BaseQRankSum=17.552;DP=731;FS=12.450;HRun=0;HaplotypeScore=243.5865;InbreedingCoeff=0.9111;MQ=78.79;MQ0=0;MQRankSum=-17.913;QD=63.37;ReadPosRankSum=1.530;VQSLOD=2.9550;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,157,8590	0/0:10,0:10:30.10:0,30,1542	0/0:18,0:18:45.15:0,45,2080	0/0:25,0:25:63.18:0,63,2484	0/0:27,0:27:81.28:0,81,4317	0/0:32,0:32:96.32:0,96,5022	0/0:31,0:30:93.32:0,93,5143	0/0:31,0:31:81.28:0,81,4320	0/0:26,0:26:78.27:0,78,4396	1/1:4,16:20:48.16:1693,48,0	1/1:5,5:10:9.03:211,9,0	1/1:2,29:31:66.23:2327,66,0	1/1:2,15:17:36.12:1215,36,0	0/0:15,0:15:45.15:0,45,2279	0/0:21,0:21:63.22:0,63,3221	0/0:29,0:29:84.29:0,84,4581	1/1:4,16:20:39.13:1320,39,0	1/1:3,23:26:63.22:2191,63,0	0/0:32,0:32:90.31:0,90,4916	0/0:21,0:21:60.21:0,60,3330	0/0:67,0:67:99:0,199,10596	1/1:1,15:16:33.11:991,33,0	1/1:0,24:24:54.18:1621,54,0	0/1:9,27:36:99:1070,0,132	1/1:4,19:23:45.15:1492,45,0	0/0:24,0:24:69.24:0,69,3781	0/0:22,0:22:63.22:0,63,3480	0/0:21,0:21:63.22:0,63,3533
chr10	72802598	.	TC	T	5698.37	PASS	AB=0.957;AC=21;AF=0.375;AN=56;BaseQRankSum=12.881;DP=659;FS=2.197;HRun=9;HaplotypeScore=77.8962;InbreedingCoeff=0.9236;MQ=73.27;MQ0=0;MQRankSum=-0.772;QD=21.92;ReadPosRankSum=4.626;VQSLOD=5.5132;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:37:74.67:0,75,1074	0/0:11,0:11:24.06:0,24,267	0/0:17,0:17:41.80:0,42,418	0/1:20,1:21:23.66:24,0,208	0/0:20,0:20:54.12:0,54,600	0/0:13,0:13:33.09:0,33,371	0/0:30,2:32:62.75:0,63,944	0/0:28,0:28:35.59:0,36,594	0/0:17,0:17:48.13:0,48,546	1/1:0,21:21:60.02:543,60,0	1/1:0,14:14:38.98:349,39,0	1/1:1,23:24:63.03:576,63,0	1/1:2,16:18:51.01:462,51,0	0/0:27,0:27:66.16:0,66,739	0/0:30,0:30:83:0,83,958	0/0:27,0:28:75.05:0,75,837	1/1:5,46:51:99:1180,129,0	1/1:6,29:35:93.02:843,93,0	0/0:15,0:15:39.12:0,39,450	0/0:15,0:15:42.10:0,42,473	0/0:38,0:42:99:0,108,1169	1/1:2,11:13:30.01:274,30,0	1/1:1,16:17:48.02:439,48,0	1/1:2,27:29:40.42:624,40,0	1/1:1,15:16:42.02:384,42,0	0/0:21,2:23:32.71:0,33,630	0/0:27,0:27:75.21:0,75,854	0/0:16,0:17:50.98:0,51,568
chr10	72804869	.	TCC	T	3901.11	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=16.290;DP=633;FS=0.368;HRun=2;HaplotypeScore=94.5201;InbreedingCoeff=0.9986;MQ=82.74;MQ0=0;MQRankSum=-3.504;QD=29.11;ReadPosRankSum=4.527;VQSLOD=3.3308;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,150,2868	0/0:8,0:8:24.08:0,24,481	0/0:17,0:17:48.16:0,48,914	0/0:21,0:21:51.39:0,51,1097	0/0:19,0:19:57.20:0,57,1156	0/0:16,0:16:48.16:0,48,955	0/0:38,0:38:99:0,114,2279	0/0:18,0:18:54.18:0,54,1045	0/0:21,0:21:63.22:0,63,1262	0/0:14,0:14:36.12:0,36,701	0/0:7,0:7:21.07:0,21,414	1/1:0,19:19:48.15:568,48,0	1/1:3,21:24:68.74:728,69,0	0/0:31,0:31:93.31:0,93,1809	0/0:18,0:18:54.17:0,54,1061	0/0:26,0:26:78.24:0,78,1513	0/0:42,0:42:99:0,126,2523	1/1:4,25:29:84.36:915,84,0	0/0:22,0:22:66.23:0,66,1293	0/0:16,0:16:48.16:0,48,955	0/0:41,0:41:99:0,123,2467	1/1:1,14:15:45.04:484,45,0	1/1:1,15:16:33.07:343,33,0	1/1:3,28:31:76.86:864,77,0	0/0:21,0:21:60.17:0,60,1111	0/0:28,0:28:84.28:0,84,1673	0/0:14,0:14:42.14:0,42,809	0/0:11,0:11:33.11:0,33,670
chr10	72804872	.	AC	A	2499.86	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=16.468;DP=627;FS=0.377;HRun=2;HaplotypeScore=85.7177;InbreedingCoeff=0.9986;MQ=82.93;MQ0=0;MQRankSum=-4.192;QD=19.23;ReadPosRankSum=5.033;VQSLOD=3.6930;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,1987	0/0:8,0:8:24:0,24,292	0/0:17,0:17:45.14:0,45,653	0/0:21,0:21:51.01:0,51,752	0/0:19,0:19:57.18:0,57,833	0/0:16,0:16:48.16:0,48,718	0/0:40,0:40:99:0,120,1792	0/0:17,0:17:51.17:0,51,764	0/0:21,0:21:63.21:0,63,944	0/0:14,0:14:36.12:0,36,536	0/0:7,0:7:21.07:0,21,315	1/1:0,19:19:47.98:408,48,0	1/1:3,21:24:66.55:515,67,0	0/0:30,0:30:90.30:0,90,1346	0/0:18,0:18:54.17:0,54,791	0/0:24,0:24:72.24:0,72,1079	0/0:42,0:42:99:0,126,1868	1/1:4,25:29:79:624,79,0	0/0:26,0:26:75.25:0,75,1110	0/0:16,0:16:48.15:0,48,699	0/0:42,0:42:99:0,126,1825	1/1:0,14:14:41.35:321,41,0	1/1:0,15:15:32.64:234,33,0	1/1:1,28:29:69.85:586,70,0	0/0:19,0:19:51.17:0,51,760	0/0:28,0:28:84.28:0,84,1232	0/0:14,0:14:42.14:0,42,628	0/0:11,0:11:33.11:0,33,495
chr10	72805689	.	T	TA	3522.03	PASS	AB=0.563;AC=19;AF=0.339;AN=56;BaseQRankSum=-2.544;DP=518;FS=12.367;HRun=8;HaplotypeScore=68.1009;InbreedingCoeff=0.9308;MQ=86.99;MQ0=1;MQRankSum=-1.499;QD=20.84;ReadPosRankSum=4.061;VQSLOD=3.1632;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:86.97:0,87,781	0/0:11,0:11:30.02:0,30,275	0/0:34,0:29:67.22:0,67,539	0/0:33,1:31:18.28:0,18,323	0/0:13,0:13:30.01:0,30,274	0/0:21,0:21:60:0,60,540	0/0:27,0:27:69.01:0,69,625	0/0:24,0:24:38.98:0,39,350	0/0:7,0:7:15:0,15,137	1/1:3,7:10:21.04:229,21,0	1/1:1,9:10:27.08:312,27,0	1/1:2,0:9:19.89:101,20,0	1/1:1,0:15:25.13:130,25,0	0/0:18,0:18:50.06:0,50,445	0/0:13,0:13:33.02:0,33,302	0/0:17,0:17:51.03:0,51,466	1/1:4,40:44:62.70:1226,63,0	1/1:4,26:30:57.21:750,57,0	0/0:20,1:21:22.41:0,22,458	0/0:4,0:4:12.01:0,12,109	0/0:23,0:23:54.02:0,54,494	1/1:0,1:12:31.71:199,32,0	1/1:2,0:8:12.69:69,13,0	1/1:0,1:22:56.83:289,57,0	0/1:2,7:9:3.39:218,0,3	0/0:23,0:24:65.07:0,65,583	0/0:13,0:13:33.01:0,33,302	0/0:9,0:9:27.01:0,27,247
chr10	72808945	.	ATGTGTG	A	1271.37	PASS	AB=0.769;AC=25;AF=0.521;AN=48;BaseQRankSum=4.324;DP=521;FS=1.828;HRun=0;HaplotypeScore=109.2370;InbreedingCoeff=0.6247;MQ=64.61;MQ0=5;MQRankSum=-5.760;QD=5.36;ReadPosRankSum=-0.198;VQSLOD=1.7886;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:38:51.17:0,51,1371	1/1:4,1:6:6.02:102,6,0	./.	./.	0/0:9,0:10:5.13:0,5,84	1/1:11,3:15:9.03:163,9,0	1/1:17,4:21:12.01:203,12,0	0/0:19,0:18:1.25:0,1,3	1/1:17,3:21:7.51:152,8,0	0/0:22,0:20:18.95:0,19,463	0/0:8,0:8:11.80:0,12,277	0/0:21,0:22:21.07:0,21,568	0/0:12,0:11:9.03:0,9,263	1/1:13,2:15:3.01:40,3,0	1/1:20,4:25:15.05:265,15,0	1/1:11,3:14:9.03:181,9,0	0/0:25,0:35:11.53:0,12,237	0/1:14,1:20:42.42:42,0,161	./.	1/1:10,1:11:3.01:60,3,0	1/1:41,0:40:2.67:58,3,0	0/0:13,0:14:8.47:0,8,91	1/1:9,0:10:2.84:14,3,0	0/0:30,0:31:44.25:0,44,1037	0/0:16,0:15:24.08:0,24,651	1/1:17,0:18:3.01:42,3,0	1/1:18,0:17:6.02:120,6,0	./.
chr10	72809789	.	T	TGG	4923.91	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-3.187;DP=646;FS=7.837;HRun=8;HaplotypeScore=93.5766;InbreedingCoeff=0.9718;MQ=76.22;MQ0=0;MQRankSum=-1.845;QD=21.79;ReadPosRankSum=0.794;VQSLOD=3.3986;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:46:80.32:275,80,0	0/0:2,0:2:6.02:0,6,67	0/0:17,0:17:19.98:0,20,343	0/0:15,0:15:21.19:0,21,307	0/0:19,0:19:36.06:0,36,401	0/0:18,0:18:39.08:0,39,435	0/0:36,0:36:90.20:0,90,992	0/0:25,0:25:51.05:0,51,544	0/0:14,0:14:36.09:0,36,401	0/0:21,0:21:51.11:0,51,567	0/0:14,0:14:30.06:0,30,333	1/1:8,26:34:51.17:810,51,0	1/1:6,9:18:26.58:388,27,0	0/0:22,0:22:57.14:0,57,635	0/0:11,0:11:33.09:0,33,368	0/0:17,0:17:45.10:0,45,492	0/0:44,0:44:99:0,108,1194	1/1:11,33:52:99:1580,116,0	0/0:22,0:22:54.13:0,54,601	0/0:15,0:15:36.05:0,36,384	0/0:64,0:65:99:0,168,1818	1/1:4,10:15:14.99:201,15,0	1/1:5,12:19:23.57:342,24,0	1/1:8,29:42:93.75:1329,94,0	0/0:8,0:8:24.06:0,24,268	0/0:9,0:9:21.04:0,21,234	0/0:19,0:19:57.05:0,57,578	0/0:7,0:7:15.04:0,15,167
chr10	72810493	.	ATG	A	1482.73	PASS	AB=0.978;AC=13;AF=0.232;AN=56;BaseQRankSum=10.619;DP=573;FS=4.028;HRun=0;HaplotypeScore=88.7110;InbreedingCoeff=0.6448;MQ=75.14;MQ0=0;MQRankSum=-1.592;QD=12.05;ReadPosRankSum=1.190;VQSLOD=3.1731;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:33.71:0,34,595	0/0:8,0:8:21.07:0,21,343	0/0:26,0:23:44.92:0,45,572	0/0:38,0:34:47.09:0,47,743	0/0:16,0:16:42.07:0,42,572	0/0:17,0:17:45.14:0,45,705	0/0:27,0:27:60.20:0,60,978	0/0:36,1:37:38:0,38,1005	0/0:24,0:24:37.31:0,37,861	1/1:12,0:12:24.08:297,24,0	1/1:11,0:11:20.56:191,21,0	0/0:20,0:20:5.10:0,5,52	0/0:14,0:14:10.77:0,11,97	0/0:23,0:23:63.19:0,63,981	0/0:22,0:22:48.14:0,48,748	0/0:19,0:19:51.17:0,51,814	1/1:19,0:19:34.76:342,35,0	1/1:28,0:28:60.17:729,60,0	0/0:18,0:18:30.57:0,31,485	0/1:13,1:14:10.11:10,0,365	0/0:33,1:34:44.10:0,44,1201	0/1:11,0:11:11.47:11,0,62	0/0:14,0:14:8.56:0,9,74	0/1:18,0:18:21.31:21,0,117	1/1:10,0:10:5.99:58,6,0	0/0:26,0:26:66.23:0,66,1074	0/0:20,1:21:10.97:0,11,691	0/0:10,0:10:27.06:0,27,392
chr10	72810503	.	GT	G	409.40	PASS	AB=0.833;AC=7;AF=0.125;AN=56;BaseQRankSum=8.441;DP=545;FS=32.283;HRun=1;HaplotypeScore=88.8978;InbreedingCoeff=0.8559;MQ=73.80;MQ0=1;MQRankSum=-1.823;QD=8.71;ReadPosRankSum=2.122;VQSLOD=-0.4908;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1546	0/0:7,0:7:21.07:0,21,336	0/0:28,0:24:72.08:0,72,997	0/0:32,0:28:51.19:0,51,1053	0/0:17,0:17:48.16:0,48,747	0/0:18,0:18:51.17:0,51,796	0/0:25,0:25:72.24:0,72,1112	0/0:33,0:33:97.18:0,97,1413	0/0:24,0:24:66.16:0,66,983	1/1:2,8:10:13.07:163,13,0	1/1:2,4:11:19.94:115,20,0	0/0:12,0:12:16.48:0,16,193	0/0:14,0:14:31.61:0,32,300	0/0:21,0:21:63.21:0,63,1006	0/0:23,0:23:63.20:0,63,945	0/0:19,0:19:57.18:0,57,877	1/1:12,7:21:12.20:227,12,0	0/0:25,0:25:28.71:0,29,122	0/0:17,0:17:49.70:0,50,697	0/0:11,0:11:30.99:0,31,461	0/0:36,0:35:99:0,103,1548	0/0:12,0:12:19.78:0,20,169	0/0:10,0:10:13.55:0,14,197	0/0:21,0:21:31.68:0,32,388	0/1:4,1:5:3.88:47,0,4	0/0:26,0:26:78.25:0,78,1192	0/0:19,0:19:52.06:0,52,806	0/0:9,0:9:27.09:0,27,431
chr10	72810505	.	GT	G	1231.63	PASS	AB=0.931;AC=15;AF=0.268;AN=56;BaseQRankSum=11.430;DP=544;FS=6.938;HRun=1;HaplotypeScore=80.9552;InbreedingCoeff=0.5249;MQ=73.16;MQ0=1;MQRankSum=-1.918;QD=8.67;ReadPosRankSum=-0.789;VQSLOD=0.4162;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,110,1434	0/0:7,0:7:21.07:0,21,336	0/0:28,0:24:59.76:0,60,936	0/0:31,0:27:60.83:0,61,1069	0/0:17,0:17:48.16:0,48,746	0/0:18,0:18:54.17:0,54,820	0/0:24,0:24:69.23:0,69,1074	0/0:32,0:32:94.19:0,94,1397	0/0:24,0:24:69.10:0,69,1014	1/1:2,8:10:15.78:168,16,0	1/1:7,4:11:23.13:144,23,0	0/1:12,0:12:16.94:17,0,22	0/1:11,1:12:42.50:42,0,43	0/0:21,0:21:63.21:0,63,1007	0/0:22,0:22:63.21:0,63,956	0/0:19,0:19:57.19:0,57,890	1/1:15,7:22:23.95:269,24,0	1/1:5,18:23:45.71:421,46,0	0/0:17,0:17:49.05:0,49,708	0/0:11,0:11:30.97:0,31,446	0/0:35,0:34:99:0,100,1500	0/1:11,3:14:24.76:102,0,25	0/1:9,1:10:13.88:106,0,14	0/1:23,0:23:32.94:97,0,33	1/1:4,1:5:6.04:49,6,0	0/0:27,0:27:81.25:0,81,1214	0/0:19,0:19:52.04:0,52,793	0/0:9,0:9:27.09:0,27,431
chr10	72810507	.	GT	G	1279.66	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=12.319;DP=545;FS=10.755;HRun=1;HaplotypeScore=80.4361;InbreedingCoeff=0.5376;MQ=76.47;MQ0=1;MQRankSum=-2.668;QD=9.14;ReadPosRankSum=-2.507;VQSLOD=-0.4537;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:17.09:0,17,254	0/0:7,0:7:21.07:0,21,314	0/0:29,0:26:72.84:0,73,867	0/0:33,0:29:76.88:0,77,986	0/0:18,0:18:51.09:0,51,632	0/0:17,0:17:51.15:0,51,713	0/0:25,0:25:72.21:0,72,1010	0/0:31,0:31:85.86:0,86,1146	0/0:25,0:25:52.34:0,52,938	1/1:10,0:10:17.49:169,17,0	1/1:13,0:13:29.29:192,29,0	0/1:13,0:13:15.12:21,0,15	0/1:12,0:12:32.83:43,0,33	0/0:21,0:21:63.19:0,63,901	0/0:22,0:22:63.17:0,63,840	0/0:20,0:20:60.17:0,60,823	1/1:20,0:20:24.61:254,25,0	1/1:4,18:22:52.13:428,52,0	0/0:19,0:19:51.61:0,52,644	0/0:11,0:11:25.69:0,26,405	0/0:33,0:32:88.94:0,89,1290	0/1:14,0:14:16.09:106,0,16	0/1:10,0:10:9.43:107,0,9	0/1:21,0:21:27.38:96,0,27	1/1:5,0:5:6.45:48,6,0	0/0:27,0:27:81.25:0,81,1123	0/0:18,0:18:43.78:0,44,709	0/0:9,0:9:27.06:0,27,363
chr10	72815164	.	A	AGTGT	4547.22	PASS	AB=0.518;AC=19;AF=0.339;AN=56;BaseQRankSum=15.288;DP=915;FS=0.776;HRun=0;HaplotypeScore=190.8620;InbreedingCoeff=0.8935;MQ=65.83;MQ0=12;MQRankSum=-9.691;QD=14.53;ReadPosRankSum=-4.895;VQSLOD=3.8222;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:39:56.53:645,57,0	0/0:5,0:7:18:0,18,203	0/0:45,0:29:19.61:0,20,197	0/0:56,0:34:13.61:0,14,227	0/0:29,0:29:87.01:0,87,1044	0/0:27,0:28:53.96:0,54,618	0/0:28,0:28:68.86:0,69,838	0/0:54,0:54:93.08:0,93,856	0/0:36,0:36:89.86:0,90,1166	1/1:35,0:40:82.35:606,82,0	1/1:1,0:18:6.02:102,6,0	1/1:11,23:37:45.14:1001,45,0	1/1:6,20:27:27.02:577,27,0	0/0:28,0:28:75.14:0,75,1057	0/0:37,0:38:96.17:0,96,1309	0/0:31,0:31:75.13:0,75,1030	0/1:2,1:29:6:110,0,6	0/0:29,0:28:46.63:0,47,497	0/0:26,0:29:35.21:0,35,566	0/0:27,0:28:71.77:0,72,912	0/0:42,0:41:90.58:0,91,1281	1/1:11,20:34:41.66:690,42,0	1/1:2,11:13:11.96:233,12,0	1/1:26,9:36:41.51:478,42,0	1/1:2,0:30:6.02:104,6,0	0/0:40,0:41:99:0,102,1322	0/0:31,0:31:80.87:0,81,1004	0/0:20,0:20:45.74:0,46,687
chr10	72815177	.	GTGTC	G	439.20	PASS	AB=0.948;AC=8;AF=0.148;AN=54;BaseQRankSum=5.153;DP=906;FS=1.531;HRun=0;HaplotypeScore=201.2175;InbreedingCoeff=-0.0805;MQ=58.45;MQ0=13;MQRankSum=0.736;QD=1.81;ReadPosRankSum=-5.241;VQSLOD=1.2066;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:49,0:43:25.43:25,0,198	0/0:8,0:8:17.94:0,18,231	./.	0/0:47,0:25:2.44:0,2,51	0/0:33,0:33:57.12:0,57,1129	0/0:30,0:30:39.03:0,39,715	0/0:31,0:31:57.17:0,57,1184	0/0:52,0:52:40.12:0,40,693	0/0:38,0:38:69.12:0,69,1446	0/0:35,0:33:53.46:0,53,651	0/0:16,0:15:15:0,15,133	0/0:32,0:32:14.16:0,14,387	0/1:28,0:28:72.85:73,0,205	0/0:30,0:30:66.14:0,66,1407	0/0:41,0:41:99:0,99,1885	0/0:35,0:35:75.21:0,75,1588	0/0:25,0:25:17.86:0,18,179	0/1:15,15:29:1.60:353,0,2	0/1:25,1:25:7.58:8,0,677	0/0:29,0:29:66.10:0,66,1217	0/0:50,0:49:77.15:0,77,1727	0/1:35,0:35:31.97:32,0,218	0/1:15,0:14:31.91:32,0,76	0/1:38,0:38:35.38:35,0,111	0/0:17,0:17:12.04:0,12,195	0/0:48,0:47:90.05:0,90,1661	0/0:30,0:30:59.53:0,60,1242	0/1:21,1:22:11.79:12,0,702
chr10	72815341	.	C	CTCTG	3501.01	PASS	AB=0.955;AC=14;AF=0.250;AN=56;BaseQRankSum=6.771;DP=706;FS=0.000;HRun=0;HaplotypeScore=180.6681;InbreedingCoeff=0.8223;MQ=54.80;MQ0=15;MQRankSum=1.937;QD=15.99;ReadPosRankSum=-0.950;VQSLOD=2.7106;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:38:10.55:551,11,0	0/0:6,0:6:12.04:0,12,234	0/0:24,0:13:27.38:0,27,281	0/0:28,0:17:40.75:0,41,402	0/1:17,0:20:1.56:2,0,291	0/0:20,0:21:49.34:0,49,453	0/0:30,0:34:45.30:0,45,827	0/0:32,0:29:56.42:0,56,523	0/0:12,0:23:44.91:0,45,425	0/0:16,0:19:20.01:0,20,270	0/0:9,0:14:19.68:0,20,216	1/1:28,2:30:62.06:715,62,0	1/1:14,3:17:31.33:492,31,0	0/0:18,0:20:36.47:0,36,467	0/0:32,0:34:89.29:0,89,987	0/0:27,0:29:80.38:0,80,1020	0/0:28,0:26:13.78:0,14,200	0/0:33,0:35:92.22:0,92,746	0/0:9,0:8:17.89:0,18,139	0/0:15,0:17:47.99:0,48,523	0/0:50,0:50:88.82:0,89,956	1/1:7,24:32:18.01:358,18,0	1/1:19,1:21:44.98:580,45,0	1/1:37,5:42:19.12:790,19,0	0/1:14,0:15:14.27:14,0,125	0/0:24,0:25:61.54:0,62,686	0/0:22,0:26:73.95:0,74,849	0/0:7,0:8:14.97:0,15,155
chr10	72815436	.	C	CT	3029.13	PASS	AB=0.976;AC=14;AF=0.250;AN=56;BaseQRankSum=-4.807;DP=588;FS=0.398;HRun=9;HaplotypeScore=62.5282;InbreedingCoeff=0.8313;MQ=70.99;MQ0=1;MQRankSum=0.590;QD=18.93;ReadPosRankSum=-0.586;VQSLOD=3.6299;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,26:31:49.16:770,49,0	0/0:7,0:7:17.98:0,18,153	0/1:19,1:20:6.79:7,0,240	0/1:12,0:12:6.22:6,0,170	0/0:22,0:23:64.99:0,65,545	0/0:18,1:19:11.81:0,12,331	0/0:24,0:24:62.98:0,63,547	0/0:27,0:27:62.97:0,63,547	0/0:20,0:20:50.96:0,51,439	0/0:38,0:38:86.95:0,87,754	0/0:16,0:16:41.62:0,42,364	1/1:2,21:23:31.10:571,31,0	1/1:3,21:24:57.15:630,57,0	0/0:19,0:19:53.97:0,54,465	0/0:27,0:26:74.98:0,75,651	0/0:22,0:22:62.97:0,63,542	0/0:23,0:23:65.97:0,66,569	0/0:23,0:23:56.97:0,57,494	0/0:8,0:8:24:0,24,208	0/0:16,0:16:41.26:0,41,360	0/0:24,0:24:59.98:0,60,521	1/1:1,14:15:39.11:431,39,0	1/1:2,15:17:16.08:405,16,0	1/1:2,16:18:36.10:398,36,0	0/0:20,0:20:47.02:0,47,396	0/0:29,0:29:74.98:0,75,651	0/0:32,1:31:53.77:0,54,692	0/0:10,0:10:24:0,24,208
chr10	72816582	.	AC	A	3419.96	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.228;DP=649;FS=5.425;HRun=1;HaplotypeScore=62.8135;InbreedingCoeff=0.9909;MQ=89.00;MQ0=0;MQRankSum=-1.719;QD=40.23;ReadPosRankSum=2.016;VQSLOD=4.3921;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1890	0/0:8,0:8:24.08:0,24,383	0/0:30,0:30:86:0,86,1233	0/0:19,0:19:48.13:0,48,708	0/0:26,0:26:78.27:0,78,1241	0/0:23,0:23:69.24:0,69,1101	0/0:22,0:22:66.23:0,66,1051	0/0:25,0:25:72.25:0,72,1146	0/0:23,0:23:69.12:0,69,995	1/1:0,23:23:69.21:945,69,0	1/1:0,21:21:60.20:839,60,0	0/0:28,0:28:78.27:0,78,1238	0/0:19,0:19:57.19:0,57,895	0/0:23,0:23:69.22:0,69,1077	0/0:33,0:33:96.27:0,96,1482	0/0:17,0:17:51.17:0,51,814	1/1:0,21:21:60.20:839,60,0	0/0:25,0:25:72.25:0,72,1150	0/0:26,0:26:72.23:0,72,1120	0/0:29,0:29:87.27:0,87,1363	0/0:27,0:27:78.25:0,78,1219	0/0:30,0:30:90.31:0,90,1423	0/0:18,0:18:51.17:0,51,814	0/0:25,0:24:75.26:0,75,1197	1/1:0,20:20:57.19:797,57,0	0/0:23,0:23:66.23:0,66,1054	0/0:21,0:21:57.18:0,57,885	0/0:4,0:4:12.04:0,12,191
chr10	72817270	.	A	AT	3457.61	PASS	AB=0.980;AC=18;AF=0.321;AN=56;BaseQRankSum=1.018;DP=559;FS=8.239;HRun=8;HaplotypeScore=60.4480;InbreedingCoeff=0.7083;MQ=75.35;MQ0=2;MQRankSum=0.069;QD=16.23;ReadPosRankSum=3.476;VQSLOD=3.2960;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:1.95:253,0,2	0/0:10,0:10:23.99:0,24,214	0/0:20,0:19:19.54:0,20,249	0/0:17,0:15:32.56:0,33,253	0/0:21,0:21:54:0,54,485	0/0:18,0:18:54.01:0,54,489	0/0:22,0:22:63.03:0,63,576	0/0:21,0:21:53.94:0,54,468	0/0:19,0:19:42.01:0,42,384	1/1:5,24:29:50.71:796,51,0	1/1:2,14:16:42.08:470,42,0	1/1:14,0:14:34.52:151,35,0	1/1:15,0:15:14.55:129,15,0	0/0:20,0:20:54.01:0,54,486	0/0:18,0:18:35.98:0,36,318	0/0:12,0:12:33.02:0,33,302	1/1:1,29:30:81.24:935,81,0	0/0:36,0:36:96:0,96,867	0/0:27,0:27:74.95:0,75,660	0/0:27,0:27:65.84:0,66,565	0/0:25,0:25:71.93:0,72,641	1/1:11,0:10:1.16:70,1,0	0/1:13,0:13:4.92:127,0,5	0/1:17,0:17:6.04:99,0,6	1/1:0,13:13:36.11:415,36,0	0/1:21,2:23:12.29:12,0,402	0/0:19,0:19:56.99:0,57,511	0/0:14,0:14:42:0,42,377
chr10	72817278	.	T	TC	3720	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=2.356;DP=563;FS=3.001;HRun=6;HaplotypeScore=61.3289;InbreedingCoeff=0.8394;MQ=70.50;MQ0=3;MQRankSum=0.343;QD=18.42;ReadPosRankSum=2.630;VQSLOD=3.4240;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:32:84.22:1022,84,0	0/0:11,0:11:24.03:0,24,233	0/0:16,0:16:6.97:0,7,164	0/0:14,0:12:27.40:0,27,213	0/0:21,0:21:51.07:0,51,503	0/0:21,0:21:59.93:0,60,571	0/0:21,0:21:63.07:0,63,621	0/0:20,0:20:36.06:0,36,366	0/0:15,0:15:45.06:0,45,447	0/1:29,0:29:19.80:73,0,20	0/1:17,0:17:5.21:99,0,5	1/1:6,12:18:48.10:546,48,0	1/1:4,11:15:39.11:468,39,0	0/0:20,0:20:57.08:0,57,560	0/0:14,0:13:27.05:0,27,274	0/0:12,0:12:36.03:0,36,349	1/1:31,0:31:31.26:213,31,0	0/0:36,0:36:99:0,99,980	0/0:28,0:27:60.05:0,60,590	0/0:22,0:22:48.10:0,48,487	0/0:31,0:31:84.96:0,85,822	1/1:8,7:14:29.97:323,30,0	1/1:5,10:15:36.03:412,36,0	1/1:3,12:15:39.11:469,39,0	1/1:15,0:15:13.11:95,13,0	0/0:23,0:23:43.43:0,43,505	0/0:20,0:20:54.09:0,54,540	0/0:15,0:15:39.02:0,39,383
chr10	72817362	.	AT	A	2382.80	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.387;DP=571;FS=2.326;HRun=10;HaplotypeScore=60.6578;InbreedingCoeff=0.9840;MQ=69.91;MQ0=1;MQRankSum=-1.456;QD=19.37;ReadPosRankSum=2.077;VQSLOD=4.5813;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:31:50.80:670,51,0	0/0:9,0:9:24.06:0,24,266	0/0:18,0:16:19.39:0,19,172	0/0:11,0:9:11.80:0,12,96	0/0:26,0:26:72.19:0,72,796	0/0:22,1:23:40.13:0,40,671	0/0:16,0:15:39.07:0,39,413	0/0:28,1:29:40.15:0,40,671	0/0:25,0:25:72.17:0,72,785	0/0:20,1:21:28.09:0,28,538	0/0:19,0:20:56.98:0,57,604	1/1:1,26:27:62.99:547,63,0	1/1:2,10:12:32.99:286,33,0	0/0:19,0:20:53.97:0,54,570	0/0:20,1:21:34.11:0,34,605	0/0:16,0:16:42.11:0,42,465	0/0:27,0:27:63.17:0,63,697	0/0:30,0:30:78.21:0,78,862	0/0:23,2:26:13.90:0,14,592	0/0:5,0:5:15.04:0,15,166	0/0:27,0:27:69.17:0,69,754	1/1:2,14:16:35.98:312,36,0	1/1:2,10:12:26.99:234,27,0	1/1:2,23:25:59.98:521,60,0	0/0:17,0:17:48.13:0,48,531	0/0:22,0:22:63.17:0,63,697	0/0:24,1:25:43.14:0,43,704	0/0:14,0:14:39.05:0,39,409
chr10	72817598	.	AGTTTGACGT	A	4721.08	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.215;DP=507;FS=39.644;HRun=0;HaplotypeScore=137.1445;InbreedingCoeff=0.9794;MQ=94.69;MQ0=0;MQRankSum=-11.456;QD=60.53;ReadPosRankSum=2.823;VQSLOD=2.9056;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,26:31:48.16:1453,48,0	0/0:3,0:3:9.03:0,9,420	0/0:33,0:33:87.25:0,87,3494	0/0:24,0:24:72.25:0,72,3141	0/0:15,0:15:45.14:0,45,1811	0/0:24,0:24:63.22:0,63,2829	0/0:24,0:24:63.22:0,63,2972	0/0:20,0:20:48.16:0,48,2279	0/0:26,0:26:69.21:0,69,2922	0/0:16,0:16:45.15:0,45,2091	0/0:9,0:9:24.08:0,24,1149	1/1:1,8:9:24.08:727,24,0	1/1:0,10:10:30.10:906,30,0	0/0:20,0:20:57.18:0,57,2385	0/0:25,0:25:69.22:0,69,3139	0/0:25,0:25:75.26:0,75,3459	0/0:35,0:34:96.33:0,96,4492	0/0:20,0:20:48.16:0,48,2159	0/0:22,0:22:57.20:0,57,2550	0/0:17,0:17:48.16:0,48,2180	0/0:22,0:22:63.20:0,63,2827	1/1:1,8:9:18.06:545,18,0	1/1:0,6:6:18.06:545,18,0	1/1:3,10:13:18.53:545,19,0	0/0:6,0:6:18.06:0,18,789	0/0:15,0:15:39.13:0,39,1734	0/0:22,0:22:63.22:0,63,2907	0/0:6,0:6:18.06:0,18,846
chr10	72817735	.	G	GGGTTCGGTC	2261.38	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=1.738;DP=337;FS=2.090;HRun=0;HaplotypeScore=88.5645;InbreedingCoeff=0.8818;MQ=69.19;MQ0=6;MQRankSum=-6.121;QD=70.67;ReadPosRankSum=-0.302;VQSLOD=3.3821;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,7:8:18.06:669,18,0	0/0:4,0:5:15.01:0,15,411	0/0:34,0:18:50.11:0,50,1201	0/0:43,0:14:27.93:0,28,759	0/0:15,0:15:45.15:0,45,1463	0/0:11,0:11:33.11:0,33,1076	0/0:15,0:17:51.09:0,51,1480	0/0:15,0:15:45.14:0,45,1358	0/0:10,0:10:30.10:0,30,979	0/0:15,0:15:42.14:0,42,1365	0/0:12,0:13:36.08:0,36,1082	1/1:1,3:3:6.02:226,6,0	1/1:0,2:2:6.02:302,6,0	0/0:6,0:6:18.05:0,18,480	0/0:6,0:6:18.06:0,18,564	0/0:6,0:6:18.05:0,18,500	0/0:23,0:23:69.24:0,69,2242	0/0:18,0:18:51.17:0,51,1563	0/0:10,0:10:27.08:0,27,710	0/0:5,0:5:15.05:0,15,480	0/0:12,0:11:30.10:0,30,952	1/1:0,8:7:15.05:728,15,0	1/1:1,3:3:9.03:350,9,0	1/1:0,2:2:3.01:151,3,0	0/0:4,0:5:15.01:0,15,394	0/0:16,0:16:45.15:0,45,1410	0/0:11,0:11:33.11:0,33,1043	0/0:6,0:6:15.05:0,15,489
chr10	72817744	.	CG	C	263.30	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.449;DP=342;FS=9.944;HRun=2;HaplotypeScore=58.2806;InbreedingCoeff=0.8053;MQ=69.43;MQ0=11;MQRankSum=-3.762;QD=8.23;ReadPosRankSum=1.723;VQSLOD=0.2409;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,8:8:11.92:112,12,0	0/0:6,0:6:11.92:0,12,129	0/0:35,0:19:12.79:0,13,281	0/0:33,0:14:8.96:0,9,176	0/0:14,0:14:42.10:0,42,565	0/0:11,0:11:26.99:0,27,279	0/0:14,0:13:32.69:0,33,370	0/0:21,0:21:47.85:0,48,575	0/0:12,0:12:26.81:0,27,271	0/0:14,0:14:42.08:0,42,518	0/0:11,0:11:26.94:0,27,324	1/1:0,3:2:3.01:38,3,0	1/1:0,2:2:6.02:76,6,0	0/0:5,0:5:14.96:0,15,154	0/0:5,0:5:15.02:0,15,184	0/0:5,0:5:12.02:0,12,156	0/0:25,0:25:63.15:0,63,876	0/0:23,0:22:51.06:0,51,630	0/0:8,0:7:14.92:0,15,154	0/0:7,0:7:12.03:0,12,158	0/0:10,0:9:17.99:0,18,186	1/1:3,5:7:11.95:116,12,0	1/1:1,7:5:6.02:69,6,0	0/0:1,1:2:0:0,0,0	0/0:10,0:10:26.80:0,27,262	0/0:15,0:15:36.06:0,36,430	0/0:10,0:10:26.99:0,27,297	0/0:13,0:11:17.88:0,18,232
chr10	72817774	.	A	AG	216.80	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.917;DP=374;FS=0.905;HRun=0;HaplotypeScore=59.9506;InbreedingCoeff=0.6594;MQ=65.19;MQ0=14;MQRankSum=-0.288;QD=12.75;ReadPosRankSum=-0.272;VQSLOD=4.1170;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,3:16:44.12:311,44,0	0/0:5,0:5:11.99:0,12,103	0/0:30,0:12:6.45:0,6,129	0/0:26,1:12:3.07:0,3,78	0/0:13,0:12:30.32:0,30,239	0/0:6,0:6:14.43:0,14,111	0/0:18,0:17:40.44:0,40,315	0/0:29,0:29:72.19:0,72,529	0/0:10,0:10:25.01:0,25,174	0/0:10,0:10:22.82:0,23,189	0/0:9,0:8:23.85:0,24,217	0/0:8,0:7:14.57:0,15,97	0/0:6,0:6:17.66:0,18,120	0/0:6,0:6:17.29:0,17,131	0/0:8,0:8:23.31:0,23,180	0/0:10,0:10:29.30:0,29,210	0/0:28,0:28:59.62:0,60,513	0/0:18,0:17:42.93:0,43,258	0/0:11,0:9:26.56:0,27,220	0/0:11,0:11:22.27:0,22,149	0/0:11,0:11:17.99:0,18,167	0/0:12,0:12:29.63:0,30,217	0/0:15,0:12:6.37:0,6,125	0/0:8,0:8:20.81:0,21,151	0/0:14,0:14:41.91:0,42,403	0/0:18,0:18:48.90:0,49,339	0/0:8,0:8:18.43:0,18,155	0/0:8,0:7:16.79:0,17,105
chr10	72818091	.	C	CT	8707.72	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=5.663;DP=607;FS=1.438;HRun=0;HaplotypeScore=69.5784;InbreedingCoeff=0.9990;MQ=85.73;MQ0=0;MQRankSum=-5.715;QD=40.88;ReadPosRankSum=2.660;VQSLOD=5.6293;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:81.28:1260,81,0	0/0:9,0:9:24.08:0,24,334	0/0:17,0:17:48.11:0,48,632	0/0:25,0:25:45.12:0,45,818	0/0:17,0:17:45.15:0,45,623	0/0:21,0:21:63.21:0,63,877	0/0:27,0:27:81.27:0,81,1126	0/0:16,0:16:45.06:0,45,582	0/0:23,0:23:69.21:0,69,926	1/1:0,13:13:39.13:609,39,0	1/1:0,13:13:33.04:486,33,0	1/1:1,33:34:96.33:1490,96,0	1/1:2,17:19:41.93:613,42,0	0/0:24,0:24:72.20:0,72,982	0/0:22,0:22:63.17:0,63,855	0/0:33,0:33:93.26:0,93,1257	1/1:1,33:34:93.32:1454,93,0	0/0:18,0:18:54.17:0,54,737	0/0:12,0:12:36.12:0,36,501	0/0:20,0:20:56.97:0,57,742	0/0:40,0:40:99:0,111,1439	1/1:0,17:17:51.17:790,51,0	1/1:1,17:18:45.08:657,45,0	1/1:0,22:22:60.20:929,60,0	1/1:0,12:12:27.09:422,27,0	0/0:22,1:23:22.17:0,22,815	0/0:32,0:32:96.19:0,96,1287	0/0:15,0:15:45.15:0,45,625
chr10	72818173	.	G	GT	1868.97	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.197;DP=544;FS=10.696;HRun=0;HaplotypeScore=86.8129;InbreedingCoeff=0.9830;MQ=77.93;MQ0=0;MQRankSum=-12.284;QD=24.59;ReadPosRankSum=1.113;VQSLOD=4.1982;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:51.12:531,51,0	0/0:6,0:6:15.05:0,15,210	0/0:14,0:13:39.12:0,39,516	0/0:22,0:22:54.16:0,54,717	0/0:21,0:21:63.19:0,63,847	0/0:23,0:23:60.20:0,60,838	0/0:23,0:23:60.20:0,60,839	0/0:34,0:34:99:0,102,1409	0/0:21,0:21:60.20:0,60,839	0/0:17,0:17:51.16:0,51,683	0/0:16,0:16:48.12:0,48,642	1/1:1,13:14:42.06:441,42,0	1/1:2,16:18:54.07:530,54,0	0/0:23,0:23:66.22:0,66,920	0/0:26,0:26:75.25:0,75,1048	0/0:28,0:28:78.26:0,78,1091	0/0:28,0:28:78.26:0,78,1091	0/0:22,0:22:63.21:0,63,880	0/0:13,0:13:36.12:0,36,501	0/0:15,0:15:45.15:0,45,625	0/0:44,0:44:99:0,132,1828	1/1:0,10:10:27.04:276,27,0	1/1:0,6:6:15.03:155,15,0	1/1:1,9:9:12.02:121,12,0	0/0:7,0:7:21.07:0,21,294	0/0:26,0:26:75.24:0,75,1029	0/0:34,0:34:99:0,99,1354	0/0:5,0:5:15.05:0,15,210
chr10	72818177	.	AG	A	385.97	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.803;DP=527;FS=11.170;HRun=1;HaplotypeScore=88.7579;InbreedingCoeff=0.9762;MQ=76.42;MQ0=0;MQRankSum=-12.696;QD=5.51;ReadPosRankSum=1.824;VQSLOD=-0.4574;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:39.83:143,40,0	0/0:5,0:5:15.05:0,15,240	0/0:14,0:13:38.61:0,39,533	0/0:19,1:20:48.12:0,48,683	0/0:20,0:20:60.19:0,60,920	0/0:23,0:23:66.20:0,66,1019	0/0:24,0:24:72.23:0,72,1115	0/0:30,0:30:87.28:0,87,1363	0/0:23,0:23:69.20:0,69,1037	0/0:17,0:17:51.15:0,51,788	0/0:15,0:15:45.13:0,45,670	1/1:0,12:12:30.33:113,30,0	1/1:0,16:16:39.96:143,40,0	0/0:23,0:23:66.22:0,66,1040	0/0:25,0:25:75.17:0,75,1163	0/0:28,0:28:84.27:0,84,1307	0/0:28,0:28:78.23:0,78,1197	0/0:22,0:22:66.22:0,66,1050	0/0:14,0:14:42.14:0,42,657	0/0:14,0:14:42.14:0,42,670	0/0:42,0:42:99:0,126,2010	1/1:0,10:10:24.68:90,25,0	1/1:0,6:6:12.43:46,12,0	1/1:0,9:8:9.73:34,10,0	0/0:7,0:7:21.07:0,21,335	0/0:25,0:25:75.22:0,75,1152	0/0:33,0:33:96.27:0,96,1446	0/0:5,0:5:15.05:0,15,240
chr10	72818179	.	TTG	T	2877.61	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.939;DP=526;FS=9.805;HRun=0;HaplotypeScore=88.4489;InbreedingCoeff=0.9861;MQ=74.09;MQ0=0;MQRankSum=-12.835;QD=41.11;ReadPosRankSum=1.577;VQSLOD=5.2693;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:48.16:772,48,0	0/0:5,0:5:15.05:0,15,304	0/0:14,1:14:39.13:0,39,761	0/0:18,0:18:48.10:0,48,860	0/0:20,0:20:60.21:0,60,1219	0/0:23,0:23:66.21:0,66,1304	0/0:25,0:25:75.23:0,75,1436	0/0:31,0:31:90.30:0,90,1795	0/0:22,0:22:66.23:0,66,1341	0/0:17,0:17:51.17:0,51,1022	0/0:15,0:15:45.14:0,45,863	1/1:0,12:12:36.12:583,36,0	1/1:0,16:16:48.16:779,48,0	0/0:24,0:24:72.24:0,72,1405	0/0:25,0:25:72.25:0,72,1462	0/0:27,0:27:81.28:0,81,1645	0/0:26,0:26:72.25:0,72,1463	0/0:22,0:22:66.23:0,66,1341	0/0:14,0:14:42.14:0,42,853	0/0:14,0:14:42.14:0,42,853	0/0:42,0:42:99:0,126,2547	1/1:0,10:10:30.10:475,30,0	1/1:0,6:6:15.05:243,15,0	1/1:0,9:8:14.96:211,15,0	0/0:8,0:8:21.07:0,21,427	0/0:25,0:25:75.26:0,75,1524	0/0:33,0:33:99:0,99,1947	0/0:5,0:5:15.05:0,15,305
chr10	72818199	.	G	GTTGT	4188.27	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=9.375;DP=571;FS=7.895;HRun=0;HaplotypeScore=118.2043;InbreedingCoeff=0.8806;MQ=65.21;MQ0=1;MQRankSum=-7.913;QD=33.51;ReadPosRankSum=-3.730;VQSLOD=2.3377;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:9,14:23:45.15:1040,45,0	0/0:7,0:7:21.07:0,21,340	./.	0/1:20,0:17:29.57:30,0,132	0/0:26,0:25:33.11:0,33,535	0/0:22,0:22:45.15:0,45,728	0/0:19,0:19:39.13:0,39,607	0/0:20,0:20:15.05:0,15,243	0/0:20,0:20:45.15:0,45,729	0/0:21,0:21:48.16:0,48,778	0/0:18,0:18:45.15:0,45,717	1/1:8,11:19:36.12:840,36,0	1/1:10,9:19:30.57:658,31,0	0/0:27,0:27:57.17:0,57,876	0/0:25,0:25:48.15:0,48,754	0/0:33,0:33:69.23:0,69,1106	0/0:26,0:26:60.20:0,60,972	0/0:25,0:25:51.17:0,51,826	0/0:19,0:19:36.11:0,36,561	0/0:10,0:10:21.06:0,21,317	0/0:35,0:35:48.16:0,48,778	1/1:6,10:18:33.11:756,33,0	1/1:5,7:13:27.09:591,27,0	1/1:7,6:12:12.04:274,12,0	0/0:8,0:8:12.04:0,12,194	0/0:28,0:28:60.20:0,60,949	0/0:35,0:35:90.29:0,90,1435	0/0:6,0:6:18.06:0,18,292
chr10	72818458	.	TAA	T	994.94	PASS	AB=0.655;AC=16;AF=0.286;AN=56;BaseQRankSum=5.422;DP=521;FS=2.680;HRun=14;HaplotypeScore=73.8069;InbreedingCoeff=0.8051;MQ=63.18;MQ0=12;MQRankSum=-7.348;QD=8.58;ReadPosRankSum=2.278;VQSLOD=1.5422;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:11:15.71:69,16,0	0/0:7,0:7:17.65:0,18,212	0/0:54,1:10:20.36:0,20,182	0/0:50,0:11:19.46:0,19,128	0/0:36,0:36:60.40:0,60,964	0/0:14,0:13:24.05:0,24,301	0/0:11,0:11:27.06:0,27,343	0/0:34,0:33:65.53:0,66,812	0/0:11,0:11:30.06:0,30,384	0/0:9,1:20:8.32:0,8,118	0/0:5,0:15:28.03:0,28,121	1/1:3,8:11:24.02:222,24,0	1/1:4,8:11:3.64:199,4,0	0/0:16,0:16:36.10:0,36,484	0/0:16,0:15:41.63:0,42,551	0/0:9,0:11:26.56:0,27,310	0/1:8,2:18:21.79:22,0,73	1/1:5,12:19:16.74:243,17,0	0/0:19,0:19:45.13:0,45,599	0/0:17,0:20:51.27:0,51,634	0/0:8,0:8:14.99:0,15,158	1/1:3,4:7:15:135,15,0	1/1:5,6:11:17.94:166,18,0	1/1:3,7:8:14.70:128,15,0	0/1:8,1:15:0.58:1,0,56	0/0:12,0:13:32.94:0,33,421	0/0:17,0:19:39.12:0,39,520	0/0:20,0:21:54.16:0,54,726
chr10	72818479	.	GA	G	1701.48	PASS	AB=0.912;AC=22;AF=0.393;AN=56;BaseQRankSum=10.108;DP=562;FS=3.672;HRun=10;HaplotypeScore=77.4834;InbreedingCoeff=0.8148;MQ=69.68;MQ0=11;MQRankSum=-4.609;QD=7.46;ReadPosRankSum=2.215;VQSLOD=2.1420;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:12:20.17:80,20,0	0/0:5,0:5:12.03:0,12,133	0/1:73,1:20:10.45:10,0,228	0/0:56,1:17:11.58:0,12,174	0/0:34,0:34:68.29:0,68,891	0/0:10,0:10:30.07:0,30,323	0/0:12,0:12:26.73:0,27,268	0/0:34,0:34:72.57:0,73,743	0/0:15,0:15:39.09:0,39,422	1/1:6,19:25:59.96:515,60,0	1/1:2,16:18:44.97:385,45,0	1/1:3,0:12:16.29:48,16,0	1/1:3,0:13:16.29:48,16,0	0/1:14,3:17:39.05:39,0,278	0/0:22,0:21:60.16:0,60,661	0/0:13,0:13:36.07:0,36,381	1/1:1,14:15:38.98:338,39,0	0/0:20,0:20:21.53:0,22,444	0/0:21,0:20:42.09:0,42,449	0/0:26,0:26:60:0,60,622	0/0:5,0:5:9.01:0,9,92	1/1:1,0:8:12.40:37,12,0	1/1:0,0:8:16.30:48,16,0	1/1:3,0:9:10.18:30,10,0	1/1:1,14:15:38.99:338,39,0	0/0:14,1:15:10.04:0,10,339	0/0:21,0:21:51.12:0,51,548	0/0:22,0:22:31.03:0,31,541
chr10	72819205	.	ACACGCACGCACGCACGCACGCACGCACGCACGCACGCACGCACG	A	467.67	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=1.505;DP=469;FS=8.685;HRun=0;HaplotypeScore=437.0100;InbreedingCoeff=0.5792;MQ=73.21;MQ0=4;MQRankSum=-1.338;QD=3.34;ReadPosRankSum=-1.877;VQSLOD=0.6621;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:2.99:24,3,0	0/0:3,0:3:5.99:0,6,79	0/0:25,0:18:19.31:0,19,669	0/0:23,0:20:18.04:0,18,731	0/0:2,0:2:3.01:0,3,332	0/0:11,0:12:17.97:0,18,1062	0/0:45,0:45:75.24:0,75,6235	0/0:16,0:16:21.07:0,21,962	0/0:11,0:16:27.05:0,27,1997	0/0:7,0:7:18.03:0,18,615	0/0:4,0:4:3.01:0,3,49	1/1:20,14:34:3.01:329,3,0	./.	0/0:19,0:19:42.06:0,42,4739	0/0:13,0:16:33.11:0,33,3691	0/0:9,0:9:21.07:0,21,2150	0/0:21,0:21:24.07:0,24,660	0/0:20,0:29:33.54:0,34,3056	0/0:10,0:10:12.04:0,12,372	0/0:8,0:8:6.02:0,6,490	0/0:28,0:26:39.09:0,39,1858	1/1:17,0:17:3.01:64,3,0	1/1:11,0:11:5.99:49,6,0	1/1:21,0:21:6.95:70,7,0	1/1:5,0:15:3.01:67,3,0	0/1:11,0:11:9.92:10,0,376	0/0:8,0:8:6.02:0,6,600	0/0:8,0:9:11.71:0,12,1370
chr10	72819748	.	TTTC	T	7215.61	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=16.137;DP=745;FS=3.369;HRun=0;HaplotypeScore=112.0538;InbreedingCoeff=0.9983;MQ=78.20;MQ0=0;MQRankSum=-3.372;QD=40.09;ReadPosRankSum=3.589;VQSLOD=6.2283;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,55:57:99:2324,110,0	0/0:6,0:6:18.06:0,18,403	0/0:28,0:28:78.08:0,78,1479	0/0:23,0:23:54.16:0,54,1036	0/0:30,0:30:84.29:0,84,1820	0/0:15,0:15:45.15:0,45,985	0/0:26,0:26:72.25:0,72,1576	0/0:27,0:27:75.21:0,75,1522	0/0:24,0:24:69.22:0,69,1483	0/0:38,0:38:99:0,102,2177	0/0:19,0:19:54.18:0,54,1166	1/1:0,15:15:36.12:593,36,0	1/1:1,24:25:66.19:1047,66,0	0/0:18,0:18:48.15:0,48,1015	0/0:27,0:27:72.25:0,72,1595	0/0:26,0:26:75.24:0,75,1597	0/0:41,0:41:99:0,120,2622	0/0:31,0:31:87.30:0,87,1923	0/0:26,0:26:66.23:0,66,1458	0/0:34,0:34:99:0,102,2256	0/0:29,0:29:84.23:0,84,1724	1/1:0,21:21:57.15:908,57,0	1/1:1,24:25:63:960,63,0	1/1:1,36:37:84.29:1385,84,0	0/0:27,0:27:81.28:0,81,1786	0/0:34,0:34:96.31:0,96,2059	0/0:23,0:23:66.23:0,66,1478	0/0:13,0:13:36.12:0,36,806
chr10	72820780	.	TA	T	1271.59	PASS	AB=0.600;AC=11;AF=0.196;AN=56;BaseQRankSum=10.918;DP=543;FS=1.534;HRun=12;HaplotypeScore=69.7861;InbreedingCoeff=0.8513;MQ=64.32;MQ0=2;MQRankSum=-0.363;QD=12.84;ReadPosRankSum=2.600;VQSLOD=3.9679;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:26:59.76:464,60,0	0/0:11,0:11:24.03:0,24,237	0/0:24,1:14:10.44:0,10,197	0/0:27,0:16:4.15:0,4,120	0/0:21,0:21:53.93:0,54,513	0/0:25,1:26:21.92:0,22,547	0/0:19,0:19:51.10:0,51,518	0/0:35,0:33:87.16:0,87,876	0/0:13,0:13:21.03:0,21,207	0/0:19,0:20:47.93:0,48,471	0/0:21,2:24:16.48:0,16,510	1/1:4,17:21:35.83:278,36,0	0/1:3,6:9:7.15:124,0,7	0/0:8,0:8:21.04:0,21,213	0/0:11,1:12:9.81:0,10,269	0/0:15,0:15:42.08:0,42,422	0/0:32,0:32:67.35:0,67,743	0/0:26,0:26:72.11:0,72,719	0/0:26,0:29:71.27:0,71,675	0/0:16,0:16:32.90:0,33,319	0/0:13,0:13:27.49:0,27,265	1/1:3,14:17:29.83:227,30,0	1/1:5,7:12:23.27:170,23,0	1/1:4,9:13:23.91:186,24,0	0/0:16,0:18:44.92:0,45,439	0/0:16,0:16:45.09:0,45,454	0/0:20,1:22:16.97:0,17,434	0/0:15,0:15:36.05:0,36,357
chr10	72823792	.	CCGAGT	C	5196.49	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.848;DP=756;FS=3.095;HRun=0;HaplotypeScore=167.7408;InbreedingCoeff=0.9989;MQ=82.98;MQ0=0;MQRankSum=-17.050;QD=32.28;ReadPosRankSum=-0.390;VQSLOD=4.4062;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,35:45:99:1374,102,0	0/0:14,0:14:42.14:0,42,1314	0/0:23,0:23:60.16:0,60,1710	0/0:31,0:31:84.29:0,84,2540	0/0:28,0:28:84.29:0,84,2687	0/0:18,0:18:54.19:0,54,1708	0/0:34,0:34:99:0,99,2800	0/0:39,0:39:99:0,114,3511	0/0:36,0:36:99:0,105,3286	0/0:22,0:22:66.23:0,66,2055	0/0:18,0:18:54.19:0,54,1743	1/1:6,34:40:99:1509,111,0	1/1:6,17:23:60.17:852,60,0	0/0:32,0:32:96.33:0,96,3053	0/0:40,0:40:99:0,111,3365	0/0:19,0:19:54.19:0,54,1609	0/0:29,0:29:87.30:0,87,2791	0/0:35,0:34:99:0,99,3079	0/0:24,0:24:69.23:0,69,2064	0/0:19,0:19:54.17:0,54,1656	0/0:47,0:47:99:0,135,4218	1/1:3,15:18:44.98:553,45,0	1/1:6,16:22:50.99:631,51,0	1/1:2,11:13:20.76:278,21,0	0/0:16,0:16:48.15:0,48,1479	0/0:38,0:38:99:0,108,3300	0/0:24,0:24:66.23:0,66,2129	0/0:9,0:9:27.09:0,27,792
chr10	72823801	.	A	AC	2715.76	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.818;DP=744;FS=4.619;HRun=0;HaplotypeScore=118.8451;InbreedingCoeff=0.9989;MQ=86.43;MQ0=0;MQRankSum=-15.928;QD=18.11;ReadPosRankSum=2.230;VQSLOD=5.9586;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,37:39:80.98:730,81,0	0/0:13,0:13:39.12:0,39,528	0/0:27,0:27:68.93:0,69,898	0/0:34,0:34:96.20:0,96,1237	0/0:30,0:30:84.24:0,84,1136	0/0:18,0:18:54.18:0,54,754	0/0:29,0:29:84.28:0,84,1174	0/0:43,0:43:99:0,126,1692	0/0:36,0:36:99:0,105,1419	0/0:23,0:23:69.23:0,69,952	0/0:22,0:22:60.20:0,60,839	1/1:1,34:35:89.88:753,90,0	1/1:0,20:20:50.94:447,51,0	0/0:35,0:35:99:0,105,1467	0/0:35,0:35:99:0,102,1394	0/0:18,0:18:54.16:0,54,718	0/0:27,0:27:81.22:0,81,1077	0/0:34,0:33:99:0,102,1389	0/0:24,0:24:72.23:0,72,986	0/0:18,0:18:51.13:0,51,689	0/0:44,0:44:99:0,132,1790	1/1:0,17:17:38.99:367,39,0	1/1:1,21:22:44.84:391,45,0	1/1:0,17:17:26.67:216,27,0	0/0:16,0:16:48.16:0,48,671	0/0:34,0:34:99:0,102,1410	0/0:27,0:27:75.24:0,75,1030	0/0:7,0:7:21.07:0,21,293
chr10	72824093	.	A	AGGACATGTGTGCTATAGTCAGAGGTCT	16259.22	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=1.769;DP=650;FS=2.570;HRun=0;HaplotypeScore=393.6455;InbreedingCoeff=0.9691;MQ=73.94;MQ0=0;MQRankSum=-10.232;QD=100.37;ReadPosRankSum=4.169;VQSLOD=3.6676;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,2:47:33.04:3336,33,0	0/0:3,0:3:9.01:0,9,459	0/0:27,0:27:66.20:0,66,1683	0/0:24,0:23:42.84:0,43,1318	0/0:23,0:23:63.13:0,63,2999	0/0:12,0:12:36.10:0,36,1975	0/0:21,0:21:63.16:0,63,3444	0/0:25,0:25:69.16:0,69,2322	0/0:29,0:29:84.26:0,84,4812	0/0:21,0:21:60.18:0,60,2847	0/0:12,0:12:36.08:0,36,1882	1/1:9,3:25:30.10:3120,30,0	1/1:13,5:33:45.84:4754,46,0	0/0:22,0:22:54.16:0,54,2985	0/0:32,0:32:90.27:0,90,5101	0/0:35,0:35:99:0,99,5363	0/0:23,0:23:66.18:0,66,3533	0/0:22,0:22:63.19:0,63,3725	0/0:17,0:17:45.14:0,45,2398	0/0:22,0:22:60.18:0,60,3517	0/0:51,0:51:99:0,147,8052	1/1:12,3:20:24:2550,24,0	1/1:11,1:24:12.04:1412,12,0	1/1:3,3:13:9.03:1087,9,0	0/0:17,0:17:51.10:0,51,2295	0/0:32,0:32:90.27:0,90,4706	0/0:17,0:17:51.18:0,51,3354	./.
chr10	72825247	.	AT	A	4391.42	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.434;DP=635;FS=0.760;HRun=4;HaplotypeScore=62.2185;InbreedingCoeff=0.9993;MQ=80.14;MQ0=0;MQRankSum=-2.998;QD=29.87;ReadPosRankSum=3.303;VQSLOD=4.9611;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,43:46:99:1332,111,0	0/0:8,0:8:24.08:0,24,336	0/0:20,0:20:54.16:0,54,703	0/0:12,0:12:28.32:0,28,325	0/0:20,0:20:57.19:0,57,798	0/0:28,0:28:78.26:0,78,1092	0/0:13,0:13:39.13:0,39,545	0/0:27,0:27:81.24:0,81,1088	0/0:18,0:18:54.15:0,54,720	0/0:23,0:23:66.21:0,66,910	0/0:15,0:15:42.12:0,42,569	1/1:0,18:18:51.16:612,51,0	1/1:1,19:20:45.14:540,45,0	0/0:12,0:12:33.11:0,33,462	0/0:35,0:35:99:0,102,1413	0/0:34,0:34:99:0,99,1369	0/0:24,0:24:72.24:0,72,1007	0/0:25,0:24:75.25:0,75,1050	0/0:26,0:26:75.23:0,75,1031	0/0:32,0:32:93.30:0,93,1285	0/0:33,0:33:99:0,99,1386	1/1:3,12:15:33.10:396,33,0	1/1:0,25:25:68.81:828,69,0	1/1:3,20:23:57.17:684,57,0	0/0:21,0:21:63.21:0,63,880	0/0:29,0:29:84.26:0,84,1158	0/0:21,0:21:63.21:0,63,882	0/0:12,0:12:36.12:0,36,504
chr10	72827096	.	GCA	G	587.54	PASS	AB=0.901;AC=20;AF=0.385;AN=52;BaseQRankSum=4.038;DP=645;FS=8.199;HRun=0;HaplotypeScore=94.6772;InbreedingCoeff=-0.4481;MQ=61.06;MQ0=17;MQRankSum=1.094;QD=1.48;ReadPosRankSum=0.310;VQSLOD=0.5233;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:43.27:0,43,445	0/1:8,2:11:53.38:53,0,221	./.	./.	0/1:15,2:17:25.20:25,0,273	0/1:16,3:19:6.10:6,0,279	0/1:35,1:36:8.69:9,0,397	0/0:29,0:29:15.04:0,15,187	0/1:24,2:28:99:144,0,254	0/0:20,0:20:25.03:0,25,201	0/1:16,0:16:15.07:15,0,140	0/1:17,1:19:14.87:15,0,222	0/1:19,2:21:30.22:30,0,284	0/1:15,1:17:14.20:14,0,352	0/0:23,2:25:14.94:0,15,578	0/1:13,3:18:88.70:89,0,278	0/0:26,0:38:39.51:0,40,433	1/1:4,0:14:11.36:56,11,0	0/1:12,3:15:48.24:48,0,118	0/1:15,0:15:15.07:15,0,167	0/1:32,1:32:55.57:56,0,282	0/1:18,2:21:59.42:59,0,104	0/0:18,0:17:24.05:0,24,249	0/1:33,3:35:15.20:15,0,426	0/0:20,0:22:30.01:0,30,314	0/1:20,2:21:25:25,0,264	0/1:18,1:18:34.08:34,0,330	0/1:16,3:18:35.49:35,0,233
chr10	72827135	.	C	CAT	1583.42	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=6.167;DP=674;FS=0.891;HRun=0;HaplotypeScore=128.5703;InbreedingCoeff=0.2365;MQ=63.76;MQ0=8;MQRankSum=1.637;QD=7.69;ReadPosRankSum=1.225;VQSLOD=3.5165;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:37,4:41:34.95:755,35,0	0/0:16,0:16:47.77:0,48,481	0/0:29,0:21:48.66:0,49,427	0/0:19,0:12:34.59:0,35,249	0/0:21,0:21:50.87:0,51,513	0/0:19,0:19:38.68:0,39,379	0/0:30,0:29:86.69:0,87,859	0/0:31,0:31:79.64:0,80,649	0/0:26,0:26:35.92:0,36,538	0/0:25,0:25:36.70:0,37,277	0/0:19,0:19:3.70:0,4,203	0/1:18,0:18:18.90:169,0,19	0/1:22,0:22:33.54:157,0,34	0/0:18,0:18:44.33:0,44,526	0/0:25,0:25:65.91:0,66,779	0/0:24,0:23:62.94:0,63,637	0/1:34,0:33:99:118,0,301	0/0:15,0:15:23.81:0,24,183	0/0:26,0:26:68.45:0,68,567	0/0:25,0:24:55.47:0,55,457	0/0:36,0:34:78.74:0,79,652	1/1:18,0:18:10:190,10,0	0/1:16,0:16:35.18:131,0,35	0/1:32,0:32:64.88:174,0,65	0/1:25,0:25:42.06:42,0,253	0/0:25,0:25:71.21:0,71,640	0/0:18,0:18:47.38:0,47,523	0/0:21,0:21:56.32:0,56,526
chr10	72827206	.	T	TACACACACACAC	1772.15	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=3.179;DP=688;FS=8.481;HRun=0;HaplotypeScore=251.0144;InbreedingCoeff=0.6062;MQ=66.38;MQ0=4;MQRankSum=-5.875;QD=17.55;ReadPosRankSum=-1.957;VQSLOD=0.7762;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:37.23:0,37,1195	0/0:17,0:20:42.10:0,42,1131	0/0:30,0:21:23.07:0,23,516	0/0:24,0:18:1.51:0,2,475	0/0:25,0:25:54.15:0,54,1726	0/0:28,0:28:72.22:0,72,2363	0/0:28,0:29:6.07:0,6,1750	0/0:33,0:35:63.16:0,63,1542	0/0:33,0:33:84.16:0,84,2393	1/1:17,0:16:38.63:642,39,0	1/1:6,6:12:3.48:132,3,0	0/0:20,0:20:24.21:0,24,1211	0/1:20,0:20:49.82:50,0,753	0/0:25,0:25:71.79:0,72,2120	0/0:24,0:24:60.19:0,60,1969	0/0:31,0:32:71.71:0,72,2067	1/1:6,8:16:21.07:954,21,0	0/0:31,0:31:70.59:0,71,1778	0/0:27,0:27:57.15:0,57,1577	0/0:25,0:25:60:0,60,1578	0/0:26,0:25:51.58:0,52,1356	0/1:19,0:19:5.75:6,0,912	0/0:22,0:24:21.81:0,22,870	0/0:19,0:19:39.13:0,39,1093	1/1:14,2:15:2.70:137,3,0	0/0:30,0:30:72.16:0,72,2013	0/0:26,0:25:72.20:0,72,2237	0/0:18,0:18:8.78:0,9,844
chr10	72827224	.	CACAT	C	1486.31	PASS	AB=0.997;AC=13;AF=0.232;AN=56;BaseQRankSum=8.136;DP=730;FS=1.075;HRun=0;HaplotypeScore=141.3168;InbreedingCoeff=0.0573;MQ=58.85;MQ0=4;MQRankSum=-1.206;QD=6.07;ReadPosRankSum=-5.205;VQSLOD=0.8159;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:60.20:1051,60,0	0/0:17,0:17:48.05:0,48,1035	0/0:34,0:21:43.37:0,43,735	0/0:24,0:13:17.16:0,17,640	0/0:25,0:25:69.16:0,69,1536	0/0:31,0:31:90.25:0,90,2130	0/0:26,0:26:75.12:0,75,1640	0/0:33,0:33:90.17:0,90,1687	0/0:35,0:35:90.24:0,90,2169	0/1:20,0:19:80.78:81,0,242	0/1:11,0:11:11.75:61,0,12	0/1:25,0:25:99:113,0,615	0/1:22,0:22:82.22:82,0,541	0/0:33,0:33:99:0,99,2120	0/0:30,0:30:84.20:0,84,1848	0/0:33,0:33:89.18:0,89,1993	0/1:18,0:18:98.64:137,0,99	0/1:34,1:35:25.01:39,0,25	0/0:28,0:28:78.18:0,78,1705	0/0:22,0:22:65.96:0,66,1619	0/0:31,0:31:87.11:0,87,1733	0/1:24,0:24:6.40:6,0,577	0/1:22,0:22:20.28:20,0,594	0/1:17,0:17:6.43:6,0,545	1/1:16,0:15:0.86:44,1,0	0/0:33,0:33:96.28:0,96,2109	0/0:34,0:33:99:0,99,2094	0/0:16,0:16:41.85:0,42,947
chr10	72827226	.	CAT	C	2400.52	PASS	AB=0.974;AC=17;AF=0.304;AN=56;BaseQRankSum=11.357;DP=729;FS=2.295;HRun=0;HaplotypeScore=112.0059;InbreedingCoeff=0.5097;MQ=58.18;MQ0=4;MQRankSum=-1.263;QD=9.68;ReadPosRankSum=-2.386;VQSLOD=3.2744;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:59.43:414,59,0	0/0:17,0:17:35.83:0,36,723	0/0:33,0:20:46.29:0,46,585	0/0:25,0:15:16.22:0,16,458	0/0:26,0:26:72.13:0,72,1138	0/0:32,0:32:93.21:0,93,1545	0/0:26,0:26:63.82:0,64,1157	0/0:32,0:32:74.18:0,74,1217	0/0:33,0:33:93.22:0,93,1587	1/1:20,0:19:15.05:154,15,0	1/1:10,0:10:11.85:98,12,0	0/1:24,1:25:99:156,0,242	0/1:23,0:23:99:153,0,168	0/0:34,0:34:99:0,102,1513	0/0:28,0:28:84.15:0,84,1339	0/0:32,0:32:81.62:0,82,1397	1/1:19,0:19:5.05:166,5,0	1/1:1,34:35:75.23:1106,75,0	0/0:27,0:27:78.16:0,78,1228	0/0:22,0:22:65.79:0,66,1093	0/0:32,0:32:90.10:0,90,1317	0/1:23,1:24:99:141,0,207	0/1:22,0:22:43.13:43,0,246	0/1:17,1:18:83.57:84,0,220	1/1:17,0:16:3.14:71,3,0	0/0:33,0:33:99:0,99,1507	0/0:34,0:33:78.24:0,78,1507	0/0:15,0:15:41.60:0,42,691
chr10	72827959	.	T	TA	3142.62	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=10.464;DP=539;FS=0.000;HRun=1;HaplotypeScore=76.9242;InbreedingCoeff=0.9110;MQ=71.36;MQ0=0;MQRankSum=-1.007;QD=25.97;ReadPosRankSum=1.730;VQSLOD=3.5230;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,19:32:80.24:877,80,0	0/0:6,0:6:18.05:0,18,224	0/0:13,0:11:5.74:0,6,224	0/1:8,0:7:2.26:2,0,60	0/0:23,0:23:68.98:0,69,837	0/0:19,0:19:57.18:0,57,775	0/0:14,0:14:39.13:0,39,539	0/0:31,0:30:81.18:0,81,966	0/0:18,0:18:54.16:0,54,702	0/0:25,0:25:73.07:0,73,874	0/0:20,0:20:56.64:0,57,691	1/1:10,17:27:71.89:837,72,0	1/1:6,17:23:59.90:728,60,0	0/0:22,0:22:60.96:0,61,822	0/0:25,0:25:72.11:0,72,886	0/0:17,0:17:42.93:0,43,607	0/0:30,0:30:89.98:0,90,1060	0/0:14,0:14:38.84:0,39,488	0/0:27,0:27:72.02:0,72,839	0/0:20,0:20:60.15:0,60,756	0/0:19,0:19:54.63:0,55,699	1/1:4,6:10:26.74:301,27,0	1/1:0,13:13:30:327,30,0	1/1:1,7:8:21.06:256,21,0	0/0:9,1:9:26.67:0,27,329	0/0:31,0:31:90.25:0,90,1150	0/0:27,0:27:75.20:0,75,960	0/0:7,0:7:18.06:0,18,249
chr10	72827968	.	TTAA	T	1914.98	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=10.926;DP=530;FS=3.785;HRun=0;HaplotypeScore=99.9753;InbreedingCoeff=0.7532;MQ=73.97;MQ0=0;MQRankSum=-1.465;QD=16.37;ReadPosRankSum=2.895;VQSLOD=3.0504;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:28,2:30:0.26:586,0,0	0/0:5,0:5:15.03:0,15,295	0/0:15,0:13:29.20:0,29,355	0/1:7,0:6:12.41:12,0,77	0/0:22,0:22:65.94:0,66,1199	0/0:20,0:20:60.19:0,60,1274	0/0:17,0:17:51.17:0,51,1041	0/0:27,0:27:78.23:0,78,1506	0/0:19,0:19:57.16:0,57,1167	0/0:28,0:28:58.96:0,59,883	0/0:19,0:19:57.18:0,57,714	1/1:19,5:24:15.67:426,16,0	1/1:19,3:22:35.63:414,36,0	0/0:20,0:20:60.17:0,60,1166	0/0:20,0:20:60.18:0,60,1208	0/0:18,0:18:54.17:0,54,1089	0/0:28,0:28:35.68:0,36,826	0/0:15,0:15:45.13:0,45,567	0/0:27,0:27:75.21:0,75,1429	0/0:19,0:19:57.17:0,57,1204	0/0:21,0:21:60.65:0,61,1216	1/1:8,2:10:13.50:217,14,0	0/1:14,0:14:4.44:152,0,4	1/1:10,0:10:29.81:277,30,0	0/0:13,0:12:36.11:0,36,452	0/0:31,0:31:90.30:0,90,1800	0/0:23,0:23:69.18:0,69,1300	0/0:6,0:6:18.06:0,18,407
chr10	72827969	.	TAA	T	2861	PASS	AB=0.875;AC=13;AF=0.232;AN=56;BaseQRankSum=11.255;DP=532;FS=3.157;HRun=7;HaplotypeScore=86.9519;InbreedingCoeff=0.9209;MQ=74.66;MQ0=0;MQRankSum=-0.404;QD=24.66;ReadPosRankSum=2.057;VQSLOD=2.9315;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,17:29:72.19:844,72,0	0/0:6,0:6:15.05:0,15,251	0/0:14,0:14:14.34:0,14,266	0/1:6,1:6:3.67:4,0,36	0/0:22,0:22:57.17:0,57,858	0/0:20,0:20:57.19:0,57,954	0/0:17,0:17:48.16:0,48,798	0/0:27,0:27:72.23:0,72,1176	0/0:18,0:18:51.17:0,51,831	0/0:29,0:29:82.29:0,82,1201	0/0:19,0:19:57.19:0,57,869	1/1:8,16:24:51.35:635,51,0	1/1:5,17:22:54.14:617,54,0	0/0:20,0:20:51.15:0,51,788	0/0:20,0:20:57.17:0,57,894	0/0:18,0:18:51.16:0,51,814	0/0:28,0:28:73.45:0,73,1118	0/0:15,0:15:45.13:0,45,690	0/0:27,0:27:72.24:0,72,1173	0/0:19,0:19:54.18:0,54,902	0/0:22,0:22:60.18:0,60,997	1/1:3,6:9:27.06:310,27,0	1/1:6,8:14:24.03:251,24,0	1/1:4,7:11:33.09:388,33,0	0/0:13,0:12:36.12:0,36,555	0/0:30,0:30:87.28:0,87,1404	0/0:23,0:23:54.18:0,54,904	0/0:7,0:7:21.07:0,21,346
chr10	72828259	.	CT	C	2563.39	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.507;DP=509;FS=0.849;HRun=9;HaplotypeScore=58.8227;InbreedingCoeff=0.9400;MQ=71.57;MQ0=0;MQRankSum=-0.582;QD=20.51;ReadPosRankSum=2.998;VQSLOD=4.1877;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,38:41:99:906,99,0	0/0:4,0:4:11.25:0,11,111	0/0:14,1:14:1.96:0,2,222	0/0:14,0:9:16.90:0,17,148	0/0:16,0:16:48.12:0,48,537	0/0:27,0:27:75.21:0,75,856	0/0:16,0:16:45.13:0,45,519	0/0:14,1:15:11.65:0,12,388	0/0:14,0:14:35.69:0,36,390	0/0:22,0:22:54.16:0,54,623	0/0:13,0:13:36.11:0,36,416	1/1:0,16:16:45.02:412,45,0	1/1:1,14:15:30.01:275,30,0	0/0:14,2:16:14.66:0,15,423	0/0:8,0:8:24.06:0,24,268	0/0:11,0:11:33.10:0,33,381	0/0:51,0:52:99:0,144,1641	0/0:31,1:32:59.80:0,60,941	0/0:16,0:17:47.94:0,48,513	0/0:11,0:11:27.08:0,27,312	0/0:22,0:22:63.19:0,63,727	1/1:0,15:16:41.05:363,41,0	1/1:0,19:19:44.61:410,45,0	1/1:3,15:18:42.02:384,42,0	0/0:14,0:14:36.11:0,36,416	0/0:20,0:20:57.17:0,57,656	0/0:14,0:14:39.11:0,39,442	0/0:11,0:11:33.07:0,33,360
chr10	72828672	.	GTCC	G	6228.97	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.268;DP=714;FS=2.052;HRun=0;HaplotypeScore=105.7678;InbreedingCoeff=1.0000;MQ=87.14;MQ0=0;MQRankSum=-2.721;QD=40.45;ReadPosRankSum=3.427;VQSLOD=6.1503;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:36:90.31:1427,90,0	0/0:16,0:16:45.15:0,45,980	0/0:23,0:23:57.17:0,57,1129	0/0:28,0:28:69.22:0,69,1317	0/0:32,0:32:93.32:0,93,2030	0/0:29,0:29:87.28:0,87,1859	0/0:19,0:19:57.18:0,57,1181	0/0:29,0:29:84.28:0,84,1778	0/0:29,0:29:81.28:0,81,1750	0/0:29,0:29:81.28:0,81,1770	0/0:13,0:13:36.12:0,36,769	1/1:1,22:23:54.18:856,54,0	1/1:2,23:25:66.22:1043,66,0	0/0:28,0:28:81.28:0,81,1738	0/0:28,0:28:78.27:0,78,1706	0/0:26,0:26:69.22:0,69,1468	0/0:24,0:24:60.21:0,60,1309	0/0:21,0:21:63.22:0,63,1374	0/0:21,0:21:57.20:0,57,1243	0/0:26,0:26:75.26:0,75,1630	0/0:46,0:46:99:0,138,2977	1/1:2,23:25:66.23:1046,66,0	1/1:1,15:16:39.13:619,39,0	1/1:0,29:29:78.27:1237,78,0	0/0:23,0:23:63.22:0,63,1352	0/0:31,0:30:93.32:0,93,2034	0/0:23,0:23:69.24:0,69,1505	0/0:16,0:16:48.16:0,48,1038
chr10	72829069	.	TAC	T	6839.93	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.239;DP=682;FS=3.446;HRun=0;HaplotypeScore=84.5116;InbreedingCoeff=0.9788;MQ=81.01;MQ0=0;MQRankSum=0.343;QD=38.00;ReadPosRankSum=1.174;VQSLOD=6.9625;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,52:52:99:2066,135,0	0/0:2,0:2:6.02:0,6,116	0/0:19,0:19:54.16:0,54,972	0/0:21,0:21:31.85:0,32,835	0/0:20,0:20:57.20:0,57,1091	0/0:27,0:27:81.28:0,81,1547	0/0:21,0:21:63.22:0,63,1206	0/0:28,0:28:81.27:0,81,1523	0/0:22,0:22:66.23:0,66,1253	0/0:18,0:18:54.19:0,54,1039	0/0:13,0:13:32.80:0,33,637	1/1:0,26:26:72.24:1102,72,0	1/1:1,22:23:54.18:827,54,0	0/0:25,0:25:69.22:0,69,1297	0/0:31,0:31:93.30:0,93,1753	0/0:27,0:27:78.25:0,78,1425	0/0:43,0:43:99:0,129,2405	0/0:21,0:21:60.21:0,60,1157	0/0:19,0:19:57.19:0,57,1048	0/0:16,0:16:45.15:0,45,869	0/0:60,0:60:99:0,181,3361	1/1:1,16:17:29.87:458,30,0	1/1:0,17:17:42.14:642,42,0	1/1:0,45:45:99:1745,114,0	0/0:16,0:16:48.15:0,48,893	0/0:16,0:16:48.16:0,48,924	0/0:24,0:24:72.25:0,72,1368	0/0:13,0:13:39.13:0,39,753
chr10	72830697	.	A	ATT	4209.43	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-3.707;DP=606;FS=5.230;HRun=9;HaplotypeScore=72.5516;InbreedingCoeff=0.9890;MQ=67.60;MQ0=0;MQRankSum=-2.038;QD=34.22;ReadPosRankSum=1.020;VQSLOD=3.9216;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:33:71.72:1053,72,0	0/0:6,0:6:18.05:0,18,192	0/0:15,0:15:20.56:0,21,197	0/0:16,0:15:16.92:0,17,203	0/0:26,0:26:66.15:0,66,702	0/0:22,0:22:60.15:0,60,638	0/0:23,0:23:54.10:0,54,572	0/0:30,0:30:69.14:0,69,734	0/0:21,0:21:51.07:0,51,535	0/0:26,0:26:57.08:0,57,607	0/0:16,0:16:33.06:0,33,351	1/1:1,21:22:48.16:739,48,0	1/1:3,16:20:42.14:638,42,0	0/0:28,0:29:71.90:0,72,746	0/0:22,0:24:53.54:0,54,526	0/0:21,0:21:48.07:0,48,502	0/0:35,0:35:87.18:0,87,926	0/0:25,0:24:69.16:0,69,734	0/0:27,0:27:72.16:0,72,759	0/0:26,0:26:66.16:0,66,702	0/0:17,0:17:48.12:0,48,511	1/1:3,10:14:32.55:444,33,0	1/1:1,14:15:39.13:600,39,0	1/1:3,16:19:48.16:734,48,0	0/0:23,0:23:57.11:0,57,600	0/0:19,0:19:45.09:0,45,471	0/0:30,0:29:81.19:0,81,862	0/0:4,0:4:12.03:0,12,128
chr10	72831493	.	GTTGTCCTTC	G	6869.55	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.471;DP=653;FS=0.000;HRun=0;HaplotypeScore=180.7926;InbreedingCoeff=0.9987;MQ=73.59;MQ0=0;MQRankSum=-13.188;QD=54.52;ReadPosRankSum=-0.986;VQSLOD=4.3751;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,35:41:72.09:2022,72,0	0/0:13,0:13:39.13:0,39,1934	0/0:21,0:21:52.14:0,52,2233	0/0:21,0:20:33.43:0,33,2048	0/0:20,0:20:54.19:0,54,2444	0/0:22,0:22:66.23:0,66,2990	0/0:23,0:23:69.24:0,69,3296	0/0:29,0:29:87.30:0,87,3836	0/0:26,0:26:78.27:0,78,3575	0/0:24,0:24:69.24:0,69,3222	0/0:21,0:21:63.21:0,63,2985	1/1:2,18:20:48.16:1474,48,0	1/1:0,8:8:24.08:757,24,0	0/0:31,0:31:93.32:0,93,4420	0/0:28,0:28:84.27:0,84,3852	0/0:24,0:24:72.25:0,72,3299	0/0:47,0:47:99:0,141,6620	0/0:16,0:16:48.16:0,48,2338	0/0:17,0:17:48.15:0,48,2050	0/0:25,0:25:72.25:0,72,3526	0/0:42,0:42:99:0,126,5798	1/1:0,17:17:38.96:1071,39,0	1/1:2,13:15:27.09:834,27,0	1/1:4,21:25:24.06:712,24,0	0/0:18,0:18:54.19:0,54,2619	0/0:24,0:24:69.23:0,69,3080	0/0:26,0:26:75.26:0,75,3425	0/0:9,0:9:27.08:0,27,1024
chr10	72832310	.	ACCTTGCTT	A	15827.77	PASS	AB=0.960;AC=21;AF=0.375;AN=56;BaseQRankSum=19.297;DP=749;FS=11.541;HRun=0;HaplotypeScore=202.7058;InbreedingCoeff=0.9260;MQ=84.63;MQ0=0;MQRankSum=-19.574;QD=56.93;ReadPosRankSum=6.453;VQSLOD=3.1897;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:48.16:1330,48,0	0/0:16,0:16:48.16:0,48,2006	0/0:33,0:32:87.25:0,87,3139	0/0:28,0:28:75.21:0,75,2912	0/0:24,0:24:72.22:0,72,2941	0/0:23,0:23:66.23:0,66,2930	0/0:31,0:31:84.24:0,84,3405	0/0:36,0:36:99:0,99,4010	0/0:37,0:37:99:0,108,4528	1/1:2,27:29:69.22:1904,69,0	1/1:0,20:20:45.11:1224,45,0	1/1:0,32:32:78.15:2236,78,0	1/1:3,25:28:69.24:1948,69,0	0/0:24,0:24:69.23:0,69,2976	0/0:26,0:26:66.23:0,66,2885	0/0:46,0:46:99:0,135,5491	1/1:2,14:16:30.57:861,31,0	0/0:12,0:12:36.12:0,36,1579	0/0:33,0:33:90.26:0,90,3294	0/0:27,0:27:81.26:0,81,3392	0/0:24,0:24:66.21:0,66,2639	1/1:1,29:30:66.23:1783,66,0	1/1:0,23:23:47.72:1348,48,0	1/1:2,18:20:28.88:858,29,0	1/1:0,29:29:81.28:2322,81,0	0/1:23,1:24:13.78:14,0,2910	0/0:44,0:44:99:0,126,5227	0/0:7,0:7:21.07:0,21,939
chr10	72833183	.	GGAA	G	114.04	PASS	AB=0.929;AC=10;AF=0.200;AN=50;BaseQRankSum=1.459;DP=230;FS=29.220;HRun=0;HaplotypeScore=46.9216;InbreedingCoeff=0.2440;MQ=36.34;MQ0=28;MQRankSum=-3.933;QD=2.24;ReadPosRankSum=-2.352;VQSLOD=-0.3615;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:7:14.45:14,0,100	0/0:2,0:2:6.02:0,6,138	./.	./.	0/0:4,0:4:7.27:0,7,90	0/0:9,0:9:21.04:0,21,406	0/0:11,0:9:24.08:0,24,425	0/0:21,0:11:29.06:0,29,485	0/0:13,0:13:22.75:0,23,603	0/1:3,1:4:6.64:50,0,7	1/1:3,2:3:2.88:48,3,0	0/0:9,0:7:6.02:0,6,88	./.	0/0:5,0:5:15.05:0,15,291	0/0:8,0:7:18.06:0,18,337	0/0:11,0:9:18.06:0,18,321	1/1:6,0:4:1.49:41,1,0	0/0:5,0:4:5.50:0,6,33	0/0:14,0:7:17.05:0,17,327	0/0:7,0:3:3.01:0,3,43	0/0:17,0:11:24.08:0,24,461	0/1:10,1:11:5.06:5,0,103	0/1:12,0:11:39.78:40,0,135	0/0:6,0:2:2.97:0,3,20	1/1:3,1:3:3.01:42,3,0	0/0:13,0:11:30.10:0,30,563	0/0:4,0:4:12.04:0,12,244	0/0:14,0:13:39.13:0,39,777
chr10	72833228	.	GGAA	G	105.22	PASS	AB=0.828;AC=9;AF=0.161;AN=56;BaseQRankSum=5.963;DP=309;FS=8.652;HRun=0;HaplotypeScore=65.4105;InbreedingCoeff=0.1541;MQ=51.96;MQ0=26;MQRankSum=-4.916;QD=1.10;ReadPosRankSum=0.053;VQSLOD=0.5105;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:16:5.77:6,0,121	0/0:3,0:3:6.02:0,6,132	1/1:21,0:3:0.77:5,1,0	0/0:14,0:3:8.97:0,9,96	0/0:5,0:4:12.04:0,12,277	0/0:18,0:17:48.16:0,48,1025	0/0:11,0:11:33.08:0,33,614	0/0:16,0:11:27.04:0,27,441	0/0:13,0:13:19.84:0,20,685	0/0:8,0:7:3.83:0,4,97	0/0:6,0:6:12.36:0,12,69	0/1:3,4:7:6.66:41,0,7	0/0:5,2:5:5.60:0,6,20	0/0:8,0:7:21.03:0,21,381	0/0:4,0:3:6.01:0,6,96	0/0:12,0:11:33.07:0,33,673	0/1:9,0:7:18.73:19,0,46	0/0:3,0:3:5.04:0,5,73	0/0:10,0:6:18.02:0,18,328	0/0:6,0:5:12.04:0,12,245	0/0:16,0:15:39.12:0,39,717	0/1:14,4:18:26.20:26,0,82	1/1:7,6:12:6.35:101,6,0	0/1:6,5:7:16.02:34,0,16	0/0:8,0:8:6:0,6,83	0/0:17,0:17:48.14:0,48,974	0/0:8,0:8:24.01:0,24,414	0/0:19,0:17:16.14:0,16,713
chr10	72838322	.	A	AAAAC	1583.16	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.884;DP=765;FS=5.226;HRun=0;HaplotypeScore=120.4393;InbreedingCoeff=0.9937;MQ=62.03;MQ0=2;MQRankSum=0.735;QD=38.61;ReadPosRankSum=1.017;VQSLOD=3.3586;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,31:41:68.53:1678,69,0	0/0:21,0:21:39.11:0,39,578	0/0:33,0:21:21.43:0,21,266	0/0:22,0:19:25.89:0,26,346	0/0:21,0:21:48.11:0,48,678	0/0:24,0:24:60.18:0,60,933	0/0:16,0:16:35.33:0,35,534	0/0:27,0:27:42.12:0,42,578	0/0:29,0:29:60.19:0,60,923	0/0:34,0:34:72.24:0,72,1152	0/0:24,0:24:60.20:0,60,947	0/0:31,0:31:75.24:0,75,1166	0/0:29,0:29:75.21:0,75,1148	0/0:26,0:26:66.22:0,66,1056	0/0:25,0:25:54.18:0,54,855	0/0:26,0:26:57.17:0,57,892	0/0:37,0:37:84.29:0,84,1358	0/0:23,0:23:45.10:0,45,674	0/0:22,0:21:48.13:0,48,755	0/0:26,0:26:45.11:0,45,641	0/0:30,0:30:66.21:0,66,1041	0/0:24,0:24:57.17:0,57,859	0/0:28,0:28:60.20:0,60,976	0/0:58,0:58:51.17:0,51,1820	0/0:21,0:21:54.17:0,54,859	0/0:31,0:31:63.19:0,63,991	0/0:27,0:27:57.17:0,57,863	0/0:9,0:9:27.04:0,27,366
chr10	72839435	.	TTGTG	T	2251.98	PASS	AB=0.883;AC=13;AF=0.232;AN=56;BaseQRankSum=4.494;DP=1158;FS=0.000;HRun=0;HaplotypeScore=215.8884;InbreedingCoeff=0.8755;MQ=57.40;MQ0=14;MQRankSum=-1.313;QD=8.87;ReadPosRankSum=2.553;VQSLOD=2.8237;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,8:35:21:291,21,0	0/0:13,0:13:28.38:0,28,533	0/0:42,0:22:11.49:0,11,244	0/0:36,0:27:43.19:0,43,664	0/0:22,0:22:48.16:0,48,1023	0/0:26,0:26:52.76:0,53,1125	0/0:85,0:71:25.43:0,25,1458	0/0:52,0:33:50.26:0,50,1056	0/0:47,0:41:42.80:0,43,1328	0/0:38,0:37:45.51:0,46,329	0/0:13,0:16:13.99:0,14,63	1/1:24,15:39:47.53:876,48,0	1/1:22,7:23:38.98:527,39,0	0/0:45,0:39:70.65:0,71,1542	0/0:61,0:54:74.15:0,74,1745	0/0:43,0:40:74.69:0,75,1434	0/1:44,1:45:11.61:12,0,182	0/0:36,0:42:47:0,47,360	0/0:40,0:37:65.84:0,66,1052	0/0:28,0:28:63.11:0,63,1422	0/0:146,0:136:99:0,188,3894	1/1:16,11:25:26.80:359,27,0	1/1:14,5:17:9.03:145,9,0	1/1:39,9:41:13.78:228,14,0	0/0:25,0:28:36.22:0,36,167	0/0:38,0:37:89.44:0,89,1696	0/0:22,0:21:50.76:0,51,1006	0/0:10,0:9:15.05:0,15,345
chr10	72839467	.	A	ATG	1803.15	PASS	AB=0.971;AC=20;AF=0.385;AN=52;BaseQRankSum=9.841;DP=1643;FS=1.959;HRun=0;HaplotypeScore=318.4857;InbreedingCoeff=0.5749;MQ=36.61;MQ0=137;MQRankSum=-6.509;QD=3.16;ReadPosRankSum=-1.096;VQSLOD=1.8419;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:54,5:49:13.59:242,14,0	0/1:17,0:16:11.42:11,0,86	./.	./.	0/0:30,0:26:27.06:0,27,303	0/0:36,0:27:37.67:0,38,444	0/0:154,0:125:51.44:0,51,914	0/0:125,0:50:41.28:0,41,418	0/0:63,0:52:11.37:0,11,545	0/1:87,1:59:29.68:351,0,30	1/1:34,0:29:5.96:55,6,0	0/1:50,4:45:17.05:149,0,17	1/1:25,4:20:18.89:227,19,0	0/0:56,0:43:56.73:0,57,642	0/0:62,0:49:52.73:0,53,574	0/0:58,0:46:23.81:0,24,592	0/1:50,1:35:22.86:258,0,23	1/1:61,0:52:25.16:339,25,0	0/0:58,0:31:34.18:0,34,380	0/0:45,0:38:44.63:0,45,464	0/0:224,0:191:99:0,163,1913	1/1:42,2:40:11.63:156,12,0	1/1:21,1:20:0.04:0,0,0	1/1:50,4:44:2.79:60,3,0	1/1:52,0:40:12.77:136,13,0	0/0:76,0:54:68.91:0,69,778	0/0:28,0:24:27.26:0,27,301	0/0:18,0:13:26.55:0,27,246
chr10	72839485	.	G	GTGGT	3541.02	PASS	AB=0.903;AC=13;AF=0.241;AN=54;BaseQRankSum=6.595;DP=1993;DS;FS=3.126;HRun=0;HaplotypeScore=441.9061;InbreedingCoeff=-0.1194;MQ=32.82;MQ0=196;MQRankSum=-4.861;QD=3.99;ReadPosRankSum=-4.194;VQSLOD=0.3048;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:64,9:58:0.68:314,1,0	0/0:22,0:18:21.54:0,22,264	./.	0/0:11,0:1:3:0,3,25	0/0:39,0:33:33.10:0,33,594	0/0:44,0:33:41.04:0,41,806	0/0:171,0:139:99:0,132,2036	0/1:177,0:55:1.38:1,0,889	0/0:80,0:64:50.16:0,50,1127	0/1:116,6:91:99:809,0,1050	0/1:41,3:37:99:216,0,130	0/1:47,9:44:55.85:273,0,56	0/1:37,8:30:49.40:458,0,49	0/0:62,0:48:72.90:0,73,1207	0/0:80,0:63:55.68:0,56,965	0/0:73,0:59:81.08:0,81,1439	0/1:47,3:38:99:441,0,162	0/1:66,0:58:87.43:87,0,450	0/0:59,0:27:52.87:0,53,816	0/0:44,0:33:53.88:0,54,867	0/0:247,0:206:99:0,218,4000	0/1:46,13:53:69.17:243,0,69	0/1:33,4:29:24.40:114,0,24	0/1:67,4:61:1.68:210,0,2	0/1:59,10:58:86.47:374,0,86	0/0:91,1:58:99:0,103,1709	0/0:38,0:31:41.69:0,42,571	0/0:22,0:15:27.06:0,27,398
chr10	72839585	.	GGT	G	1817.36	PASS	AB=0.962;AC=16;AF=0.286;AN=56;BaseQRankSum=6.532;DP=1441;DS;FS=2.134;HRun=0;HaplotypeScore=235.7099;InbreedingCoeff=0.4879;MQ=37.42;MQ0=163;MQRankSum=2.212;QD=3.94;ReadPosRankSum=1.243;VQSLOD=2.6048;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,6:30:1.91:6,2,0	0/1:14,0:12:4.59:5,0,184	0/0:18,0:3:8.98:0,9,85	0/1:17,0:3:5.97:6,0,33	0/0:33,0:29:56.83:0,57,908	0/0:41,0:37:64.94:0,65,995	0/1:72,0:52:0.27:0,0,654	0/0:129,0:48:94.54:0,95,1123	0/0:49,0:37:67.43:0,67,1080	0/0:71,1:46:37.85:0,38,694	0/0:31,0:25:9.03:0,9,146	0/1:40,14:43:14.26:396,0,14	1/1:28,10:26:20.63:293,21,0	0/0:41,0:33:59.66:0,60,926	0/0:60,0:43:69.81:0,70,1153	0/0:60,0:47:80.67:0,81,1219	0/1:38,1:28:78.87:79,0,114	0/0:29,1:24:2.21:0,2,453	0/0:66,1:26:51.13:0,51,718	0/0:34,0:28:51.15:0,51,773	0/0:184,4:151:99:0,214,3323	1/1:36,11:45:43.32:493,43,0	1/1:32,11:36:38.98:475,39,0	1/1:48,14:42:20.58:233,21,0	0/0:33,0:26:18.05:0,18,246	0/0:57,1:42:61.51:0,62,1236	0/1:25,0:18:0.74:1,0,394	0/0:24,0:18:42.13:0,42,628
chr10	72839598	.	GTA	G	829.41	PASS	AB=0.985;AC=12;AF=0.214;AN=56;BaseQRankSum=11.365;DP=1257;DS;FS=8.584;HRun=0;HaplotypeScore=221.0533;InbreedingCoeff=0.3595;MQ=39.64;MQ0=84;MQRankSum=-1.901;QD=2.36;ReadPosRankSum=0.496;VQSLOD=0.9607;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:26:3.94:11,0,4	0/0:10,0:10:16.27:0,16,254	0/0:25,0:3:9.03:0,9,116	0/1:24,0:4:8.43:8,0,38	0/0:33,0:31:57.15:0,57,1103	0/0:35,0:33:45.87:0,46,1016	0/0:56,0:40:73.62:0,74,1044	0/0:133,0:67:71.61:0,72,1300	0/0:37,1:32:56.47:0,56,1202	0/1:55,0:33:75.79:76,0,363	0/0:22,0:18:8.93:0,9,92	0/1:46,2:39:38.93:143,0,39	1/1:31,1:23:17.25:175,17,0	0/0:39,0:36:73.29:0,73,1097	0/0:46,0:39:78.80:0,79,1316	0/0:47,0:38:67.23:0,67,1401	0/1:24,0:13:44.36:44,0,77	0/0:27,0:23:14.54:0,15,531	0/0:49,0:24:56.06:0,56,770	0/0:28,0:27:68.58:0,69,902	0/0:199,1:159:99:0,247,3929	0/1:45,0:43:99:212,0,104	1/1:35,1:30:35.57:174,36,0	1/1:48,2:37:20.21:151,20,0	0/0:25,0:21:14.81:0,15,141	0/0:46,0:39:81.87:0,82,1350	0/0:23,0:19:1.02:0,1,525	0/0:19,0:15:40.07:0,40,568
chr10	72839608	.	GTATA	G	145.87	PASS	AB=0.940;AC=10;AF=0.179;AN=56;BaseQRankSum=9.408;DP=1092;DS;FS=0.612;HRun=0;HaplotypeScore=232.7901;InbreedingCoeff=0.3258;MQ=41.97;MQ0=61;MQRankSum=-6.846;QD=0.86;ReadPosRankSum=-1.371;VQSLOD=2.4975;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:24:2.49:30,2,0	0/0:10,0:10:17.65:0,18,384	0/0:36,0:4:12.03:0,12,220	0/0:35,0:5:9.02:0,9,117	0/0:29,0:28:65.33:0,65,1596	0/0:29,0:29:53.53:0,54,1355	0/0:45,2:40:1:0,1,2096	0/0:97,0:61:80.64:0,81,2208	0/0:33,0:33:56.69:0,57,1631	0/1:27,3:19:15.65:97,0,16	1/1:15,0:14:8.86:57,9,0	0/0:41,0:34:11.61:0,12,940	0/1:29,1:24:28.86:29,0,462	0/0:39,0:38:44.96:0,45,1656	0/0:45,0:39:75.24:0,75,1801	0/0:37,0:36:75.57:0,76,1850	0/1:15,0:11:27.69:28,0,71	0/1:27,0:25:24.76:25,0,820	0/0:41,0:19:39.12:0,39,800	0/0:24,0:23:63.21:0,63,1521	0/0:162,1:140:99:0,256,6256	0/0:39,0:37:56.79:0,57,1292	0/0:36,0:28:36.11:0,36,906	0/0:42,0:32:17.41:0,17,332	1/1:16,0:13:2.96:20,3,0	0/0:47,0:42:73.10:0,73,2297	0/0:22,0:20:17.72:0,18,1031	0/0:18,0:16:46.82:0,47,947
chr10	72839609	.	TATATA	T	381.83	PASS	AB=0.955;AC=8;AF=0.143;AN=56;BaseQRankSum=9.691;DP=1045;DS;FS=6.466;HRun=0;HaplotypeScore=235.4274;InbreedingCoeff=0.1036;MQ=42.66;MQ0=55;MQRankSum=-6.548;QD=2.81;ReadPosRankSum=-1.035;VQSLOD=1.8398;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,2:24:7.68:0,8,139	0/0:8,0:9:17.09:0,17,500	0/0:37,0:4:12.04:0,12,361	0/0:37,0:5:12.01:0,12,220	0/0:30,0:29:66.96:0,67,2202	0/0:29,1:28:59.56:0,60,1835	0/0:42,1:38:84.55:0,85,2857	0/0:95,0:60:75.86:0,76,3292	0/0:32,1:32:70.59:0,71,2162	0/1:24,0:14:60.35:168,0,60	1/1:11,0:10:8.98:73,9,0	0/0:40,0:34:5.49:0,5,1352	0/1:27,0:22:4.05:4,0,709	0/0:37,1:37:83.72:0,84,2372	0/0:40,0:38:83.58:0,84,2534	0/0:38,0:35:81.39:0,81,2585	0/1:14,0:10:35.77:36,0,150	0/1:26,1:24:99:157,0,1224	0/0:39,0:19:45.15:0,45,1282	0/0:24,0:23:63.22:0,63,2042	0/0:153,5:136:99:0,265,8470	0/0:37,0:36:62.23:0,62,1842	0/0:34,0:28:34.83:0,35,1155	0/0:38,2:31:16.33:0,16,510	0/1:9,0:7:10.88:21,0,11	0/0:49,0:43:70.27:0,70,3382	0/1:20,2:20:56.11:56,0,1409	0/0:20,0:18:54.18:0,54,1527
chr10	72839613	.	T	TG	140.60	PASS	AB=0.937;AC=8;AF=0.143;AN=56;BaseQRankSum=7.487;DP=1052;DS;FS=2.667;HRun=0;HaplotypeScore=189.1072;InbreedingCoeff=0.3048;MQ=42.55;MQ0=60;MQRankSum=-4.490;QD=1.28;ReadPosRankSum=-0.137;VQSLOD=2.8744;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,2:26:11.68:0,12,116	0/0:9,0:9:20.66:0,21,260	0/0:37,0:5:15.05:0,15,199	0/0:39,0:5:9.03:0,9,107	0/0:28,0:27:69.17:0,69,893	0/0:24,3:26:47.67:0,48,771	0/0:37,0:34:92.63:0,93,1239	0/0:97,0:58:99:0,108,1419	0/0:28,1:28:63.21:0,63,871	0/1:25,2:13:26.02:91,0,26	1/1:10,0:9:8.89:61,9,0	0/0:41,0:35:24.86:0,25,732	0/0:27,0:23:21.10:0,21,354	0/0:37,0:36:83.88:0,84,1090	0/0:44,1:42:84.26:0,84,1140	0/0:39,0:36:81.72:0,82,1100	0/1:13,0:9:8.98:9,0,144	0/1:23,2:25:66.91:67,0,499	0/0:45,0:17:39.13:0,39,542	0/0:25,0:25:66.22:0,66,911	0/0:154,10:141:99:0,267,3661	0/0:38,0:37:62.62:0,63,837	0/0:33,0:27:36.59:0,37,504	0/0:42,1:32:16.57:0,17,222	1/1:8,1:6:2.63:19,3,0	0/0:43,2:39:74.36:0,74,1432	0/1:20,3:21:25.64:26,0,577	0/0:19,0:18:51.16:0,51,680
chr10	72839624	.	GTA	G	85.93	PASS	AB=0.960;AC=7;AF=0.125;AN=56;BaseQRankSum=8.407;DP=1299;DS;FS=5.748;HRun=0;HaplotypeScore=247.5688;InbreedingCoeff=0.1559;MQ=38.27;MQ0=117;MQRankSum=-6.096;QD=0.34;ReadPosRankSum=-5.120;VQSLOD=1.3410;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:48,6:41:20.08:113,20,0	0/0:14,0:14:14.30:0,14,311	0/0:29,0:3:8.98:0,9,115	0/0:31,0:4:5.98:0,6,77	0/0:33,0:31:39.12:0,39,959	0/0:35,0:33:39.60:0,40,854	0/0:62,0:54:71.04:0,71,1485	0/0:134,0:66:63.51:0,64,1487	0/0:42,0:40:65.80:0,66,1071	0/0:42,0:20:5.17:0,5,191	0/0:10,0:7:9.02:0,9,95	0/1:46,1:41:32.75:33,0,449	0/1:27,0:23:9.96:10,0,244	0/0:44,0:41:34.24:0,34,1101	0/0:50,0:42:37.94:0,38,1155	0/0:42,1:39:60.08:0,60,972	0/1:18,1:13:29.70:47,0,30	0/0:29,0:27:16.45:0,16,714	0/1:54,0:15:2.99:3,0,308	0/0:27,0:26:66.14:0,66,1053	0/0:221,0:181:99:0,217,4105	0/0:37,2:37:11.98:0,12,851	0/0:35,1:27:33:0,33,509	0/1:41,6:36:4.36:4,0,160	0/0:12,0:7:2.93:0,3,30	0/0:53,0:43:63.21:0,63,1718	0/0:30,0:24:37.98:0,38,694	0/0:20,0:18:48.12:0,48,766
chr10	72839651	.	ATG	A	48.29	PASS	AB=0.943;AC=6;AF=0.115;AN=52;BaseQRankSum=7.512;DP=1479;DS;FS=0.813;HRun=0;HaplotypeScore=280.2665;InbreedingCoeff=0.0562;MQ=35.43;MQ0=158;MQRankSum=-5.399;QD=0.24;ReadPosRankSum=-0.526;VQSLOD=1.9033;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:59,4:47:66.11:75,0,66	0/0:17,0:16:19.95:0,20,315	./.	./.	0/0:33,0:31:59.64:0,60,813	0/0:36,0:30:51.26:0,51,747	0/0:93,2:72:34.50:0,35,1363	0/0:179,4:72:91.14:0,91,1187	0/0:43,1:38:46.57:0,47,572	0/1:52,2:23:17.22:17,0,144	1/1:11,0:7:1.82:5,2,0	0/0:36,2:32:13.96:0,14,81	0/1:29,2:25:28.36:28,0,41	0/0:61,4:57:67.73:0,68,961	0/0:66,4:51:76.15:0,76,1040	0/0:50,0:45:73.84:0,74,983	0/0:20,0:13:10.54:0,11,60	0/1:35,3:34:32.17:32,0,583	0/0:70,1:20:38.40:0,38,570	0/0:37,0:35:77.30:0,77,1285	0/0:243,2:192:99:0,172,3175	0/0:31,2:28:16.19:0,16,112	0/0:32,1:21:2.20:0,2,23	0/0:45,3:37:2.03:0,2,19	0/0:14,2:11:2.37:0,2,8	0/0:61,0:47:99:0,100,1222	0/0:32,0:24:45.46:0,45,554	0/0:21,0:18:40.92:0,41,576
chr10	72839665	.	ATG	A	40.04	PASS	AB=0.949;AC=7;AF=0.135;AN=52;BaseQRankSum=5.514;DP=1496;DS;FS=12.446;HRun=0;HaplotypeScore=294.5857;InbreedingCoeff=-0.0064;MQ=34.55;MQ0=187;MQRankSum=-3.663;QD=0.14;ReadPosRankSum=1.150;VQSLOD=0.4729;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:60,4:48:11.30:11,0,108	0/0:20,0:18:17.90:0,18,277	./.	./.	0/0:29,1:28:48.05:0,48,706	0/0:36,0:29:48.20:0,48,709	0/0:96,6:78:3.87:0,4,1222	0/0:187,5:63:87.31:0,87,1208	0/0:45,4:42:49.81:0,50,685	0/0:55,0:25:9.76:0,10,243	1/1:12,0:7:1.52:4,2,0	0/0:31,5:29:21.06:0,21,158	0/0:25,2:23:8.44:0,8,155	0/0:58,2:52:27.64:0,28,900	0/0:75,3:57:18.66:0,19,828	0/0:57,1:51:37.66:0,38,1116	0/1:17,3:14:34.87:35,0,83	0/1:38,1:34:70.51:71,0,572	0/1:80,1:23:24.57:25,0,476	0/0:47,1:43:61.51:0,62,1440	0/0:225,7:181:77.50:0,78,2815	0/0:23,0:17:4.56:0,5,31	0/0:34,1:21:3:0,3,28	0/0:41,1:32:5.46:0,5,29	0/0:20,0:14:2.37:0,2,8	0/1:64,2:50:5.24:5,0,1254	0/0:32,1:25:41.52:0,42,501	0/0:23,0:20:34.50:0,34,535
chr10	72839676	.	TGTG	T	38.33	PASS	AB=0.995;AC=5;AF=0.093;AN=54;BaseQRankSum=8.131;DP=1504;DS;FS=7.166;HRun=0;HaplotypeScore=302.1943;InbreedingCoeff=0.0907;MQ=34.01;MQ0=194;MQRankSum=-6.552;QD=0.21;ReadPosRankSum=-3.990;VQSLOD=1.0625;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:63,0:45:20.15:20,0,173	0/0:18,0:17:19.11:0,19,355	./.	0/0:7,0:1:3.01:0,3,39	0/0:31,0:28:51.63:0,52,985	0/0:36,0:30:53.18:0,53,1025	0/0:98,2:72:83:0,83,1834	0/0:189,1:76:88.02:0,88,1977	0/0:61,0:49:70.38:0,70,1307	0/1:59,1:28:80.87:81,0,384	0/0:15,0:9:0.06:0,0,12	0/1:38,0:28:32.97:33,0,186	0/0:28,1:23:9.67:0,10,228	0/0:57,0:49:34.71:0,35,1355	0/0:71,1:51:72.71:0,73,1297	0/0:62,0:53:97.28:0,97,1759	0/0:20,0:15:13.59:0,14,241	0/0:36,0:31:38.77:0,39,1024	0/0:87,1:22:25.97:0,26,632	0/0:49,0:43:74.25:0,74,2045	0/0:227,4:177:99:0,200,4133	1/1:25,0:18:2.86:8,3,0	0/0:32,0:18:2.87:0,3,19	0/0:37,0:26:1.08:0,1,13	0/0:22,1:16:3.81:0,4,19	0/0:67,0:50:99:0,113,2076	0/0:29,0:23:45.09:0,45,831	0/0:23,0:20:48.16:0,48,992
chr10	72839699	.	TGTG	T	617.81	PASS	AB=0.970;AC=13;AF=0.232;AN=56;BaseQRankSum=9.520;DP=1336;DS;FS=2.786;HRun=0;HaplotypeScore=258.9992;InbreedingCoeff=0.2589;MQ=35.20;MQ0=162;MQRankSum=-8.760;QD=1.91;ReadPosRankSum=-5.896;VQSLOD=1.4094;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:44,1:32:35.55:96,0,36	0/0:20,0:20:41.50:0,42,678	0/0:27,0:2:6.02:0,6,86	0/0:40,0:5:5.31:0,5,148	0/0:31,3:29:57.68:0,58,1228	0/0:29,0:22:31.43:0,31,692	0/0:78,0:54:90.16:0,90,1775	0/0:127,1:67:45.51:0,46,2207	0/0:55,1:45:67.09:0,67,1301	0/1:48,3:29:99:100,0,120	0/1:17,1:11:17.68:30,0,18	1/1:36,0:29:18.89:231,19,0	0/1:21,2:18:51.77:150,0,52	0/0:51,0:44:73.75:0,74,1631	0/0:69,0:50:86.74:0,87,1695	0/0:61,2:56:35.67:0,36,1728	0/1:23,0:16:33.92:34,0,222	0/1:30,0:27:35.43:35,0,225	0/0:65,0:16:29.92:0,30,578	0/0:40,3:38:86.44:0,86,1906	0/0:190,1:156:99:0,165,3978	1/1:24,3:21:2.68:17,3,0	1/1:23,5:19:5.74:76,6,0	0/1:39,0:29:0.11:2,0,0	0/0:25,0:23:0.56:0,1,2	0/0:50,2:39:56.38:0,56,1837	0/0:23,0:19:19.13:0,19,632	0/0:15,0:14:30.07:0,30,670
chr10	72839702	.	G	GTGTGTGGTGT	2241.05	PASS	AB=0.847;AC=15;AF=0.268;AN=56;BaseQRankSum=8.828;DP=1289;DS;FS=5.413;HRun=0;HaplotypeScore=334.9389;InbreedingCoeff=0.2646;MQ=36.19;MQ0=152;MQRankSum=-9.370;QD=6.83;ReadPosRankSum=-5.714;VQSLOD=0.7602;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:25:33.44:121,0,33	0/0:20,0:20:30.21:0,30,819	0/0:31,0:3:9.02:0,9,115	0/0:41,0:5:10.84:0,11,171	0/0:34,0:30:58.91:0,59,1678	0/0:27,0:19:35.90:0,36,973	0/0:69,0:52:91.28:0,91,2399	0/0:115,0:65:65.25:0,65,2883	0/0:57,0:48:75.47:0,75,1955	0/1:30,14:32:42.57:1062,0,43	0/1:16,0:10:9.73:49,0,10	1/1:29,0:29:10.92:453,11,0	0/1:23,0:20:36.19:403,0,36	0/0:51,0:44:55.94:0,56,2338	0/0:68,0:53:90.99:0,91,2377	0/0:58,0:56:32.58:0,33,2397	0/1:22,0:16:51.30:51,0,256	0/1:12,0:17:99:118,0,160	0/0:60,0:15:30.07:0,30,701	0/0:43,0:39:67.15:0,67,2708	0/0:171,0:148:99:0,181,5633	1/1:23,0:21:5.87:40,6,0	1/1:25,0:20:6.02:77,6,0	0/1:29,0:25:8.13:25,0,8	1/1:17,9:27:1.21:3,1,0	0/0:53,0:42:57.01:0,57,2533	0/0:22,0:17:19.05:0,19,916	0/0:15,0:14:30.06:0,30,972
chr10	72839737	.	GGT	G	2565.48	PASS	AB=0.836;AC=12;AF=0.214;AN=56;BaseQRankSum=8.396;DP=1478;DS;FS=11.709;HRun=0;HaplotypeScore=282.0456;InbreedingCoeff=0.3232;MQ=37.98;MQ0=98;MQRankSum=-3.074;QD=6.12;ReadPosRankSum=-2.848;VQSLOD=1.3554;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:34,14:30:9.39:85,0,9	0/0:20,1:21:36.12:0,36,591	0/0:43,1:5:9.03:0,9,142	0/0:52,0:6:6.01:0,6,68	0/0:39,2:35:52.54:0,53,839	0/0:24,2:24:36.25:0,36,666	0/0:67,2:51:89.92:0,90,1422	0/0:133,0:68:95.35:0,95,1554	0/0:59,2:58:71.51:0,72,1335	0/1:67,4:46:76.76:77,0,871	0/0:33,0:26:9.66:0,10,283	0/1:32,16:37:71.55:540,0,72	0/1:22,12:32:10.68:479,0,11	0/0:50,2:42:23.54:0,24,885	0/0:70,0:60:83.39:0,83,1367	0/0:51,0:49:84.07:0,84,1445	0/0:22,0:18:17.95:0,18,395	0/1:20,7:24:66.13:363,0,66	0/0:48,0:22:35.33:0,35,519	0/0:52,0:46:56.47:0,56,1369	0/0:147,1:128:99:0,158,2983	1/1:33,13:41:39.10:496,39,0	1/1:29,12:33:4.70:214,5,0	1/1:47,16:50:37.35:449,37,0	0/0:37,0:34:36:0,36,470	0/0:69,0:54:80.31:0,80,1513	0/1:30,0:26:24.19:24,0,504	0/0:12,0:9:15.05:0,15,253
chr10	72839748	.	GTA	G	1048.79	PASS	AB=0.970;AC=11;AF=0.196;AN=56;BaseQRankSum=11.768;DP=1586;DS;FS=2.632;HRun=0;HaplotypeScore=305.4676;InbreedingCoeff=-0.0427;MQ=37.60;MQ0=143;MQRankSum=-4.446;QD=2.09;ReadPosRankSum=1.210;VQSLOD=2.0962;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:54,0:35:42.98:43,0,76	0/0:20,0:20:36.08:0,36,592	0/0:28,0:3:8.97:0,9,92	0/0:34,0:2:5.95:0,6,64	0/0:44,0:37:18.16:0,18,857	0/0:32,0:26:32.47:0,32,696	0/0:76,1:60:87.44:0,87,1666	0/0:141,1:61:93.16:0,93,1692	0/0:67,0:60:66.54:0,67,1464	0/1:83,3:53:56.75:57,0,844	0/0:37,1:30:23.08:0,23,271	0/1:53,0:41:99:212,0,114	0/1:36,0:30:21.45:211,0,21	0/0:48,1:40:42.94:0,43,1068	0/0:80,0:64:90.22:0,90,1551	0/0:56,0:52:99:0,108,1712	0/1:25,0:21:2.34:2,0,237	0/1:36,0:31:99:173,0,164	0/0:54,0:25:44.32:0,44,668	0/0:55,0:48:81.40:0,81,1425	0/0:158,1:132:99:0,195,3543	0/1:51,1:45:5.75:177,0,6	1/1:46,0:35:4.41:91,4,0	0/1:68,3:58:25.17:135,0,25	0/0:44,1:39:35.08:0,35,387	0/0:77,2:57:63.04:0,63,1761	0/1:33,2:30:89.98:90,0,632	0/0:10,0:8:1.51:0,2,261
chr10	72839758	.	GTA	G	577.52	PASS	AB=0.980;AC=9;AF=0.161;AN=56;BaseQRankSum=10.700;DP=1660;DS;FS=23.913;HRun=0;HaplotypeScore=314.6087;InbreedingCoeff=0.1944;MQ=37.37;MQ0=192;MQRankSum=-4.899;QD=1.86;ReadPosRankSum=-1.749;VQSLOD=0.9547;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:36:8.27:0,8,312	0/0:19,0:19:34.92:0,35,600	0/1:17,0:3:6.20:27,0,6	0/0:21,0:2:3.01:0,3,52	0/0:43,1:35:51.62:0,52,754	0/0:31,0:29:24.17:0,24,645	0/0:83,3:63:75.85:0,76,1671	0/0:144,0:62:98.80:0,99,1642	0/0:68,0:58:68.54:0,69,1496	0/1:90,1:51:99:216,0,494	1/1:41,1:30:0.48:85,0,0	0/0:62,0:49:71.14:0,71,860	0/0:38,0:32:21.11:0,21,401	0/0:49,1:37:43.51:0,44,990	0/0:86,0:67:97.98:0,98,1689	0/0:64,0:55:99:0,107,1769	1/1:26,1:22:25.26:201,25,0	0/1:39,0:33:26.37:26,0,530	0/0:59,0:27:50.27:0,50,965	0/0:49,1:41:87.10:0,87,1422	0/0:172,1:144:99:0,215,3714	0/0:58,0:47:47.87:0,48,573	0/0:43,2:36:18.39:0,18,257	0/0:68,2:58:48.57:0,49,583	0/1:46,1:42:82.03:139,0,82	0/0:85,1:59:0.14:0,0,1426	0/1:38,1:32:22.57:23,0,621	0/0:12,0:8:1.39:0,1,133
chr10	72839760	.	ATG	A	1557.01	PASS	AB=0.876;AC=7;AF=0.130;AN=54;BaseQRankSum=5.136;DP=1676;DS;FS=2.155;HRun=0;HaplotypeScore=313.4705;InbreedingCoeff=0.4427;MQ=37.31;MQ0=195;MQRankSum=-2.775;QD=6.11;ReadPosRankSum=-0.869;VQSLOD=2.7195;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:38:7.08:0,7,284	0/0:19,0:19:33.11:0,33,520	./.	0/0:19,0:1:3.01:0,3,34	0/0:43,0:34:45.69:0,46,672	0/0:34,0:30:10.80:0,11,605	0/0:88,0:63:73.94:0,74,1430	0/0:147,0:64:92.54:0,93,1433	0/0:68,1:57:84.07:0,84,1233	0/1:84,10:51:99:566,0,286	1/1:29,11:29:24.04:304,24,0	0/0:68,0:51:79.17:0,79,1146	0/0:43,0:34:46.54:0,47,625	0/0:50,0:37:57.61:0,58,854	0/0:87,1:68:97.88:0,98,1479	0/0:62,1:53:99:0,103,1597	1/1:20,10:23:13.40:355,13,0	0/0:41,1:34:22.67:0,23,740	0/0:61,0:27:63.63:0,64,943	0/0:50,0:40:75.03:0,75,1142	0/0:173,1:145:99:0,216,3323	0/0:58,1:47:40.16:0,40,804	0/0:48,1:36:25.84:0,26,377	0/0:73,0:61:42.17:0,42,855	0/1:31,18:42:39.71:461,0,40	0/0:86,1:58:12.59:0,13,1329	0/1:41,0:33:5.45:5,0,538	0/0:12,0:8:7.84:0,8,91
chr10	72841608	.	CT	C	2846.46	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=9.640;DP=682;FS=3.713;HRun=11;HaplotypeScore=72.2735;InbreedingCoeff=0.9618;MQ=71.79;MQ0=1;MQRankSum=-0.429;QD=15.14;ReadPosRankSum=4.152;VQSLOD=4.4718;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,38:51:97.69:782,98,0	1/1:1,1:2:3:25,3,0	0/0:13,1:12:17.99:0,18,161	0/0:14,0:11:12.46:0,12,106	0/0:19,0:19:33.08:0,33,352	0/0:17,0:17:50.87:0,51,524	0/0:23,0:23:54.06:0,54,547	0/0:31,0:31:72.15:0,72,747	0/0:30,1:31:53.49:0,53,736	0/0:30,0:31:62.99:0,63,628	0/0:15,0:15:35.87:0,36,358	1/1:3,21:24:44.94:369,45,0	1/1:1,25:26:56.90:464,57,0	0/0:21,0:21:51.02:0,51,492	0/0:26,1:27:35.51:0,36,583	0/0:24,0:25:56.28:0,56,621	0/0:20,0:20:22.81:0,23,416	1/1:7,16:24:49.95:400,50,0	0/0:22,1:24:35.32:0,35,550	0/0:25,0:25:51.11:0,51,527	0/0:41,2:43:80.49:0,80,1028	1/1:4,11:15:23.92:197,24,0	1/1:1,17:18:41.95:345,42,0	1/1:2,22:28:62.07:467,62,0	0/0:25,2:27:17.09:0,17,578	0/0:36,1:39:65.43:0,65,876	0/0:31,0:31:84.16:0,84,869	0/0:15,0:16:44.95:0,45,462
chr10	72841739	.	CGTGTGTGT	C	1221.08	PASS	AB=0.767;AC=13;AF=0.241;AN=54;BaseQRankSum=5.702;DP=653;FS=1.774;HRun=0;HaplotypeScore=152.5249;InbreedingCoeff=0.7175;MQ=62.78;MQ0=13;MQRankSum=-6.104;QD=7.98;ReadPosRankSum=2.686;VQSLOD=2.3927;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:33:10.98:73,0,11	0/0:16,0:15:15.05:0,15,579	./.	0/0:51,0:20:0:0,0,0	0/0:10,0:10:3.01:0,3,86	0/0:21,0:22:36.55:0,37,1209	0/0:25,0:24:30.07:0,30,750	0/0:29,0:29:15.51:0,16,322	0/0:29,0:31:32.96:0,33,913	0/0:21,0:21:18.05:0,18,515	0/0:14,0:14:18.06:0,18,715	1/1:19,5:24:15.01:319,15,0	1/1:15,6:22:15.52:355,16,0	0/0:16,0:16:9.03:0,9,294	0/0:18,0:18:21.54:0,22,797	0/0:21,0:25:33.11:0,33,1033	0/0:26,0:33:63.15:0,63,1898	1/1:12,9:21:17.67:394,18,0	0/0:14,0:13:13.28:0,13,320	0/0:8,0:8:12.04:0,12,449	0/0:50,0:54:29.98:0,30,976	1/1:6,3:9:2.90:19,3,0	1/1:8,1:9:3.01:75,3,0	1/1:25,6:33:13.96:153,14,0	0/0:18,0:19:14.47:0,14,555	0/0:18,0:19:25.31:0,25,743	0/0:17,0:16:18.06:0,18,683	0/0:9,0:8:6.02:0,6,238
chr10	72842865	.	AATCTGG	A	5262.79	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.670;DP=594;FS=15.990;HRun=0;HaplotypeScore=137.6197;InbreedingCoeff=0.9853;MQ=83.20;MQ0=0;MQRankSum=-13.694;QD=46.57;ReadPosRankSum=0.821;VQSLOD=3.7517;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:30.02:594,30,0	0/0:19,0:19:57.20:0,57,2086	0/0:15,0:15:45.15:0,45,1425	0/0:24,0:24:68.45:0,68,2135	0/0:10,0:10:30.10:0,30,1099	0/0:22,0:22:63.22:0,63,2227	0/0:34,0:34:99:0,99,3627	0/0:23,0:23:69.23:0,69,2263	0/0:15,0:15:45.13:0,45,1485	0/0:24,0:23:69.22:0,69,2307	0/0:8,0:8:18.06:0,18,659	1/1:3,31:34:81.24:1939,81,0	1/1:2,18:20:51.18:1254,51,0	0/0:30,0:30:87.28:0,87,3098	0/0:18,0:18:54.19:0,54,1979	0/0:24,0:24:69.24:0,69,2423	0/0:30,0:30:90.31:0,90,3207	0/0:30,0:29:90.31:0,90,3251	0/0:20,0:20:57.18:0,57,1942	0/0:12,0:12:36.12:0,36,1254	0/0:46,0:46:99:0,135,4512	1/1:3,16:18:36.08:792,36,0	1/1:0,5:5:8.99:167,9,0	1/1:2,11:13:21.03:516,21,0	0/0:19,0:18:54.16:0,54,1824	0/0:17,0:17:45.15:0,45,1647	0/0:25,0:25:75.26:0,75,2711	0/0:16,0:16:45.15:0,45,1568
chr10	72843280	.	ATGTGTGTGTG	A	2683.88	PASS	AB=0.893;AC=9;AF=0.161;AN=56;BaseQRankSum=5.027;DP=834;FS=3.833;HRun=0;HaplotypeScore=248.3377;InbreedingCoeff=0.7159;MQ=50.20;MQ0=32;MQRankSum=-7.814;QD=17.20;ReadPosRankSum=-1.353;VQSLOD=2.5868;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:46:43.32:239,0,43	0/0:10,0:11:12.51:0,13,447	0/0:29,0:8:0.47:0,0,1	0/0:37,0:9:3.45:0,3,22	0/0:16,0:17:39.13:0,39,1326	0/0:23,0:27:39.10:0,39,1286	0/0:36,0:38:60.03:0,60,1749	0/0:38,0:32:30.08:0,30,536	0/0:17,0:22:36.12:0,36,1260	0/0:33,0:34:57.59:0,58,1196	0/0:9,0:8:11.99:0,12,335	1/1:23,9:33:47.17:1181,47,0	1/1:13,11:24:20.25:481,20,0	0/0:23,0:26:39.13:0,39,1510	0/0:22,0:27:53.42:0,53,2249	0/0:28,0:30:54.13:0,54,1820	0/0:28,0:32:66.17:0,66,1668	0/0:15,0:18:25.22:0,25,498	0/0:26,0:22:21.02:0,21,737	0/0:20,0:20:27.56:0,28,919	0/0:102,0:95:98.86:0,99,3509	1/1:15,15:30:33.41:883,33,0	1/1:13,4:17:2.94:54,3,0	0/0:26,14:38:2.76:0,3,7	0/0:14,0:16:27.09:0,27,714	0/0:33,0:36:81.27:0,81,2746	0/0:19,0:19:30.09:0,30,1149	0/0:12,0:9:18.06:0,18,725
chr10	72844501	.	G	GA	6101.02	PASS	AB=0.967;AC=24;AF=0.429;AN=56;BaseQRankSum=-13.097;DP=589;FS=4.542;HRun=9;HaplotypeScore=57.8119;InbreedingCoeff=0.8541;MQ=76.24;MQ0=1;MQRankSum=-0.891;QD=21.33;ReadPosRankSum=2.047;VQSLOD=5.7252;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,25:32:66.18:730,66,0	0/0:10,0:10:26.95:0,27,227	0/0:26,0:24:42.32:0,42,343	0/1:17,0:13:3.98:4,0,152	0/0:25,0:26:71:0,71,601	0/0:22,0:22:56.96:0,57,489	0/1:13,1:14:3.19:3,0,204	0/0:32,0:32:68.79:0,69,578	0/0:18,0:18:41.98:0,42,365	1/1:9,17:26:41.08:590,41,0	1/1:5,22:29:0.82:605,1,0	1/1:2,12:14:33.09:365,33,0	1/1:3,14:17:42.11:461,42,0	0/0:14,0:14:29.95:0,30,253	0/0:15,0:15:41.99:0,42,364	0/0:23,0:23:59.99:0,60,521	1/1:5,18:24:56.13:570,56,0	1/1:4,22:26:37.30:638,37,0	0/0:15,1:16:11.80:0,12,328	0/0:26,2:28:11.62:0,12,559	0/0:13,0:12:29.99:0,30,260	1/1:3,20:24:33.94:580,34,0	1/1:5,22:27:57.15:626,57,0	1/1:2,15:17:45.12:498,45,0	1/1:1,17:18:39.11:431,39,0	0/0:26,0:26:74.98:0,75,648	0/0:26,0:26:71.96:0,72,621	0/0:8,0:8:24:0,24,208
chr10	72844627	.	G	GA	1925.31	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.943;DP=648;FS=5.875;HRun=10;HaplotypeScore=65.0978;InbreedingCoeff=0.9449;MQ=78.44;MQ0=0;MQRankSum=0.881;QD=19.06;ReadPosRankSum=0.986;VQSLOD=4.5506;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:74.87:0,75,615	0/0:15,1:16:12.95:0,13,312	0/0:23,0:24:11.52:0,12,157	0/0:21,0:21:16.92:0,17,145	0/0:26,0:27:70.92:0,71,569	0/0:24,0:25:58.95:0,59,474	0/0:15,0:15:38.93:0,39,320	0/0:33,0:33:77.89:0,78,640	0/0:25,0:25:62.89:0,63,517	1/1:7,23:30:69.17:730,69,0	1/1:12,22:36:18.81:605,19,0	0/0:22,0:22:59.90:0,60,490	0/0:16,0:16:35.95:0,36,295	0/0:18,0:18:47.88:0,48,388	0/0:20,0:20:38.91:0,39,317	0/0:19,0:19:44.91:0,45,369	1/1:1,16:17:45.11:480,45,0	0/0:1,0:12:22.41:0,22,65	0/0:28,0:28:65.86:0,66,537	0/0:30,0:31:73.91:0,74,595	0/0:17,0:16:41.94:0,42,345	0/0:22,0:23:52.95:0,53,425	0/0:23,0:23:59.90:0,60,489	0/0:20,0:20:56.87:0,57,459	1/1:5,13:18:5.47:263,5,0	0/0:24,0:24:65.88:0,66,536	0/0:24,0:24:65.92:0,66,542	0/0:29,0:32:61.25:0,61,675
chr10	72848380	.	C	CGT	2818.99	PASS	AB=0.609;AC=7;AF=0.125;AN=56;BaseQRankSum=2.689;DP=716;FS=2.218;HRun=0;HaplotypeScore=104.3839;InbreedingCoeff=0.8773;MQ=70.63;MQ0=2;MQRankSum=-0.678;QD=34.38;ReadPosRankSum=2.597;VQSLOD=5.8980;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:75.23:0,75,931	0/0:8,0:8:18.06:0,18,226	0/0:28,0:25:42.02:0,42,495	0/0:31,0:30:30.81:0,31,614	0/0:28,0:28:78.22:0,78,955	0/0:17,0:17:45.09:0,45,548	0/0:34,0:34:81.23:0,81,993	0/0:29,0:29:72.22:0,72,885	0/0:33,0:33:96.27:0,96,1174	1/1:5,15:20:48.15:769,48,0	1/1:2,7:10:21.06:343,21,0	0/0:30,0:30:75.23:0,75,932	0/0:33,0:33:93.07:0,93,1132	0/0:28,0:28:69.22:0,69,869	0/0:24,0:24:54:0,54,656	0/0:17,0:19:53.82:0,54,619	1/1:2,36:37:84.29:1395,84,0	0/0:32,0:32:81.24:0,81,1003	0/0:21,0:21:57.14:0,57,689	0/0:19,0:19:50.99:0,51,619	0/0:71,0:71:99:0,184,2279	0/0:19,0:19:51.16:0,51,643	0/0:12,0:13:23.91:0,24,279	0/0:31,0:31:72.19:0,72,888	0/1:5,9:14:4.62:461,0,5	0/0:27,0:28:42.59:0,43,701	0/0:16,0:16:33.11:0,33,416	0/0:8,0:8:24.08:0,24,302
chr10	72851343	.	C	CTTCT	10800.73	PASS	AB=0.895;AC=23;AF=0.411;AN=56;BaseQRankSum=-9.303;DP=671;FS=6.391;HRun=0;HaplotypeScore=108.6533;InbreedingCoeff=0.9213;MQ=59.35;MQ0=4;MQRankSum=-1.642;QD=39.13;ReadPosRankSum=1.892;VQSLOD=5.1399;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,6:12:21.07:489,21,0	0/0:13,0:13:27.09:0,27,453	0/0:27,0:17:27.08:0,27,412	0/0:27,0:13:13.38:0,13,230	0/0:32,0:32:84.27:0,84,1383	0/0:29,0:29:72.23:0,72,1200	0/0:25,0:25:60.20:0,60,994	0/0:42,0:42:69.71:0,70,1157	0/0:25,0:25:64.06:0,64,1041	1/1:10,23:33:72.22:1602,72,0	1/1:6,8:14:21.07:472,21,0	1/1:3,13:16:33.11:812,33,0	1/1:8,17:26:30.10:750,30,0	0/0:18,0:18:39.12:0,39,624	0/0:23,0:23:42.14:0,42,687	0/0:22,0:22:60.20:0,60,1004	1/1:6,22:27:36.12:895,36,0	1/1:11,12:23:45.11:1063,45,0	0/0:27,0:27:54.18:0,54,891	0/0:27,0:27:69.22:0,69,1151	0/0:15,0:15:39.13:0,39,658	1/1:2,20:22:32.49:1345,32,0	1/1:1,16:17:36.12:893,36,0	1/1:6,26:33:57.19:1385,57,0	1/1:3,15:18:36.12:897,36,0	0/1:30,4:34:99:199,0,1166	0/0:26,0:26:78.25:0,78,1297	0/0:16,0:16:36.12:0,36,614
chr10	72851383	.	TGC	T	429.78	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.298;DP=641;FS=6.933;HRun=0;HaplotypeScore=113.3240;InbreedingCoeff=0.9997;MQ=74.29;MQ0=0;MQRankSum=-9.250;QD=13.86;ReadPosRankSum=0.150;VQSLOD=3.2766;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:46.31:257,46,0	0/0:13,0:13:39.13:0,39,792	0/0:45,0:37:99:0,104,1899	0/0:32,1:27:61.63:0,62,1325	0/0:19,0:19:57.20:0,57,1157	0/0:19,0:19:54.19:0,54,1095	0/0:29,0:29:87.29:0,87,1731	0/0:28,0:28:66.18:0,66,1445	0/0:23,0:23:66.23:0,66,1279	0/0:29,0:29:87.30:0,87,1758	0/0:19,0:19:51.18:0,51,1035	0/0:20,0:20:51.15:0,51,998	0/0:14,0:14:39.12:0,39,749	0/0:18,0:18:54.19:0,54,1063	0/0:19,0:19:57.20:0,57,1145	0/0:23,0:23:66.23:0,66,1338	0/0:35,0:35:84.18:0,84,1621	1/1:1,13:14:38.66:294,39,0	0/0:25,0:25:75.26:0,75,1508	0/0:27,0:26:81.28:0,81,1646	0/0:14,0:14:36.12:0,36,720	0/0:22,0:22:63.22:0,63,1266	0/0:22,0:22:59.97:0,60,1218	0/0:24,0:24:60.12:0,60,1193	0/0:19,0:19:54.19:0,54,1097	0/0:32,1:33:80.25:0,80,1901	0/0:27,0:27:75.26:0,75,1508	0/0:11,0:11:33.09:0,33,632
chr10	72851388	.	C	CTT	790.38	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.068;DP=626;FS=6.942;HRun=2;HaplotypeScore=111.9585;InbreedingCoeff=0.9996;MQ=76.08;MQ0=0;MQRankSum=-9.036;QD=21.96;ReadPosRankSum=0.436;VQSLOD=1.5695;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:48.05:471,48,0	0/0:13,0:13:39.13:0,39,636	0/0:39,0:34:87.05:0,87,1334	0/0:32,0:28:73.51:0,74,1076	0/0:19,0:19:57.19:0,57,930	0/0:18,0:18:54.17:0,54,857	0/0:27,0:27:78.24:0,78,1224	0/0:27,0:27:75.15:0,75,1109	0/0:21,0:21:60.18:0,60,932	0/0:28,0:28:84.29:0,84,1360	0/0:20,0:20:51.17:0,51,831	0/0:19,0:19:51.11:0,51,798	0/0:12,0:12:33.11:0,33,538	0/0:18,0:18:54.18:0,54,866	0/0:20,0:20:57.19:0,57,924	0/0:22,0:22:63.22:0,63,1025	0/0:37,0:37:87.30:0,87,1391	1/1:5,13:18:41.32:441,41,0	0/0:23,0:23:69.23:0,69,1087	0/0:29,0:28:87.28:0,87,1367	0/0:15,0:15:39.13:0,39,629	0/0:22,0:22:63.21:0,63,1019	0/0:21,0:21:56.85:0,57,929	0/0:25,0:25:60.01:0,60,925	0/0:19,0:19:54.18:0,54,880	0/0:29,1:30:59.39:0,59,1349	0/0:23,0:23:69.23:0,69,1101	0/0:11,0:11:33.11:0,33,522
chr10	72851408	.	CTTTGACACA	C	1640.70	PASS	AB=0.968;AC=5;AF=0.089;AN=56;BaseQRankSum=7.457;DP=600;FS=13.565;HRun=0;HaplotypeScore=177.7909;InbreedingCoeff=0.8282;MQ=86.25;MQ0=0;MQRankSum=-6.821;QD=25.24;ReadPosRankSum=0.268;VQSLOD=2.1870;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,12:17:30.10:947,30,0	0/0:9,0:9:27.09:0,27,1156	0/0:26,0:25:66.20:0,66,2961	0/0:32,0:30:58.78:0,59,3187	0/0:20,0:20:54.19:0,54,2413	0/0:19,0:18:48.13:0,48,2152	0/0:24,0:24:72.25:0,72,3460	0/0:25,0:25:72.25:0,72,3278	0/0:20,0:20:57.20:0,57,2802	0/0:21,0:21:63.22:0,63,3109	0/0:23,0:23:63.22:0,63,3101	0/0:19,0:19:51.18:0,51,2498	0/0:14,0:14:36.12:0,36,1683	0/0:17,0:17:48.16:0,48,2227	0/0:20,0:20:57.20:0,57,2793	0/0:20,0:20:57.20:0,57,2758	0/0:38,0:38:90.31:0,90,4343	1/1:5,13:17:27.09:813,27,0	0/0:24,0:24:72.25:0,72,3452	0/0:27,0:27:78.27:0,78,3556	0/0:18,0:18:51.18:0,51,2310	0/0:21,0:21:57.11:0,57,2534	0/0:19,0:19:48.15:0,48,2167	0/0:23,0:23:60.21:0,60,2700	0/0:23,0:23:63.22:0,63,2903	0/1:29,1:30:4.50:4,0,3755	0/0:22,0:22:66.23:0,66,3155	0/0:9,0:9:27.09:0,27,1299
chr10	72851736	.	T	TCCC	1864.70	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-4.473;DP=564;FS=6.961;HRun=7;HaplotypeScore=91.4944;InbreedingCoeff=0.9712;MQ=71.52;MQ0=0;MQRankSum=0.155;QD=27.83;ReadPosRankSum=-0.169;VQSLOD=1.3457;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,138,1832	0/0:10,0:10:21.05:0,21,274	0/0:15,0:14:34.33:0,34,424	0/0:23,0:21:47.87:0,48,606	0/0:21,0:21:51.16:0,51,696	0/0:25,0:25:60.18:0,60,801	0/0:34,0:34:84.20:0,84,1128	0/0:26,0:26:54.14:0,54,735	0/0:10,0:10:24.06:0,24,311	1/1:1,2:5:9.01:148,9,0	1/1:6,12:21:36.10:669,36,0	0/0:15,0:15:33.10:0,33,442	0/0:12,0:12:30.01:0,30,386	0/0:14,0:14:30.06:0,30,375	0/0:20,0:20:48.14:0,48,639	0/0:17,0:17:42.12:0,42,556	1/1:5,19:25:39.13:809,39,0	0/0:19,0:19:51.09:0,51,673	0/0:22,0:22:54.17:0,54,733	0/0:27,0:27:69.20:0,69,925	0/0:39,0:39:99:0,99,1349	0/0:11,0:11:27.08:0,27,368	0/0:16,0:16:45.15:0,45,614	0/0:30,0:30:90.28:0,90,1209	1/1:2,11:16:21.04:395,21,0	0/0:19,0:19:51.16:0,51,693	0/0:11,0:11:30.10:0,30,409	0/0:5,0:5:12.04:0,12,162
chr10	72852361	.	T	TTAAA	4671.60	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.289;DP=550;FS=5.322;HRun=0;HaplotypeScore=87.8240;InbreedingCoeff=0.9272;MQ=66.51;MQ0=0;MQRankSum=-2.553;QD=47.67;ReadPosRankSum=-1.040;VQSLOD=4.7403;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:81.28:0,81,1367	0/0:3,0:3:9.03:0,9,152	0/0:11,0:12:8.07:0,8,195	0/0:12,0:12:26.98:0,27,410	0/0:26,0:26:63.18:0,63,1003	0/0:27,0:27:72.23:0,72,1174	0/0:18,0:18:42.14:0,42,709	0/0:34,0:34:57.18:0,57,934	0/0:14,0:14:39.13:0,39,654	1/1:8,18:27:60.18:1402,60,0	1/1:7,13:20:36.12:820,36,0	0/0:21,0:21:54.18:0,54,912	0/0:17,0:17:48.15:0,48,777	0/0:16,0:16:39.13:0,39,658	0/0:19,0:19:42.14:0,42,709	0/0:17,0:17:45.15:0,45,760	1/1:10,22:32:66.22:1562,66,0	0/0:23,0:23:51.15:0,51,831	0/0:25,0:25:69.24:0,69,1154	0/0:21,0:21:42.14:0,42,709	0/0:12,0:12:36.11:0,36,576	0/0:11,0:11:18.06:0,18,301	0/0:9,0:9:18.06:0,18,303	0/0:9,0:9:12.04:0,12,203	1/1:9,9:19:39.13:888,39,0	0/0:32,1:33:6.59:0,7,1242	0/0:32,0:31:84.29:0,84,1412	0/0:8,0:8:21.07:0,21,355
chr10	72852781	.	T	TA	734.56	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.714;DP=622;FS=1.779;HRun=6;HaplotypeScore=62.3595;InbreedingCoeff=0.9970;MQ=77.88;MQ0=0;MQRankSum=-1.021;QD=26.23;ReadPosRankSum=2.263;VQSLOD=4.1760;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,1193	0/0:11,0:11:30.05:0,30,298	0/0:12,0:12:24.02:0,24,225	0/0:18,0:18:35.60:0,36,296	0/0:29,0:29:78.14:0,78,780	0/0:18,0:18:51.09:0,51,508	0/0:27,0:27:72.15:0,72,729	0/0:29,0:29:84.18:0,84,852	0/0:26,0:26:72.02:0,72,717	0/0:24,0:24:66.13:0,66,665	0/0:15,0:15:39.09:0,39,397	0/0:24,0:24:63.13:0,63,637	0/0:17,0:17:48.11:0,48,489	0/0:16,0:16:45.09:0,45,452	0/0:17,0:17:48.05:0,48,465	0/0:18,0:18:48.11:0,48,490	0/0:19,0:19:57.11:0,57,574	1/1:2,26:28:66.21:829,66,0	0/0:22,0:22:66.14:0,66,667	0/0:23,0:23:57.12:0,57,577	0/0:27,0:27:75.15:0,75,756	0/0:27,0:27:72.13:0,72,726	0/0:19,0:19:54.12:0,54,551	0/0:27,0:27:72.12:0,72,724	0/0:24,0:24:72.16:0,72,734	0/0:35,0:35:96.21:0,96,973	0/0:16,0:16:45.10:0,45,459	0/0:12,0:12:36.08:0,36,367
chr10	72854048	.	AC	A	5785.25	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=10.220;DP=553;FS=5.798;HRun=7;HaplotypeScore=60.8247;InbreedingCoeff=0.9983;MQ=86.09;MQ0=1;MQRankSum=-3.713;QD=26.18;ReadPosRankSum=4.000;VQSLOD=5.5466;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:31:72.16:734,72,0	0/0:6,0:6:18.06:0,18,226	0/0:21,0:20:53.94:0,54,605	0/0:26,0:25:60.91:0,61,673	0/0:25,0:25:75.21:0,75,917	0/0:24,0:24:60.17:0,60,729	0/0:25,0:25:69.17:0,69,826	0/0:12,0:12:30.09:0,30,367	0/0:14,0:14:42.13:0,42,528	1/1:1,22:23:63.10:626,63,0	1/1:2,10:12:27.06:275,27,0	1/1:0,17:17:48.11:489,48,0	1/1:0,15:15:42.10:428,42,0	0/0:13,0:13:36.12:0,36,453	0/0:12,0:12:33.11:0,33,415	0/0:24,0:24:69.20:0,69,845	1/1:0,29:29:81.18:826,81,0	1/1:0,15:15:33.07:337,33,0	0/0:21,0:21:45.14:0,45,565	0/0:20,0:20:54.16:0,54,666	0/0:31,0:31:90.29:0,90,1132	1/1:1,25:26:63.14:642,63,0	1/1:1,10:11:27.06:275,27,0	1/1:2,27:29:70.78:786,71,0	1/1:0,13:13:36.08:367,36,0	0/0:27,1:28:44.61:0,45,849	0/0:12,0:11:36.09:0,36,437	0/0:18,0:17:45.14:0,45,566
chr10	72854835	.	CT	C	2524.54	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.508;DP=681;FS=0.463;HRun=2;HaplotypeScore=69.5255;InbreedingCoeff=0.9979;MQ=90.77;MQ0=0;MQRankSum=-0.730;QD=34.12;ReadPosRankSum=3.253;VQSLOD=3.9738;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,50:50:99:1789,138,0	0/0:15,0:15:45.15:0,45,674	0/0:27,0:27:73.46:0,73,1011	0/0:31,0:31:84.05:0,84,1079	0/0:15,0:15:42.14:0,42,627	0/0:28,0:28:84.28:0,84,1258	0/0:16,0:16:48.16:0,48,719	0/0:36,0:36:99:0,108,1559	0/0:29,0:29:84.27:0,84,1238	0/0:23,0:23:66.21:0,66,958	0/0:21,0:21:57.14:0,57,808	0/0:29,0:29:87.28:0,87,1263	0/0:25,0:25:75.24:0,75,1105	0/0:16,0:16:45.14:0,45,654	0/0:34,0:34:99:0,99,1464	0/0:18,0:18:54.18:0,54,809	0/0:27,1:28:45.32:0,45,1151	1/1:1,23:24:66.21:857,66,0	0/0:21,0:21:63.19:0,63,885	0/0:24,0:24:69.21:0,69,989	0/0:23,0:23:69.21:0,69,992	0/0:31,0:31:93.32:0,93,1392	0/0:25,0:25:72.24:0,72,1078	0/0:26,0:26:78.26:0,78,1169	0/0:20,0:20:57.19:0,57,854	0/0:14,0:14:42.13:0,42,609	0/0:22,0:21:63.21:0,63,944	0/0:10,0:10:21.07:0,21,313
chr10	72857026	.	C	CCT	1119.40	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.803;DP=575;FS=5.490;HRun=0;HaplotypeScore=77.0901;InbreedingCoeff=0.9895;MQ=88.95;MQ0=0;MQRankSum=-7.514;QD=38.60;ReadPosRankSum=0.177;VQSLOD=5.3349;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:19:48.16:861,48,0	0/0:5,0:5:15.04:0,15,203	0/0:25,0:25:63.19:0,63,877	0/0:23,0:23:63.53:0,64,846	0/0:21,0:21:57.19:0,57,837	0/0:19,0:19:54.16:0,54,756	0/0:21,0:21:63.18:0,63,888	0/0:33,0:33:99:0,99,1440	0/0:18,0:18:51.16:0,51,734	0/0:23,0:23:66.21:0,66,939	0/0:21,0:21:63.20:0,63,904	0/0:16,0:16:45.15:0,45,663	0/0:26,0:26:78.20:0,78,1085	0/0:25,0:25:75.25:0,75,1103	0/0:26,0:26:78.25:0,78,1129	0/0:23,0:23:69.23:0,69,1016	0/0:24,0:24:72.23:0,72,1040	1/1:2,7:9:21.05:379,21,0	0/0:15,0:15:42.14:0,42,618	0/0:17,0:17:51.17:0,51,750	0/0:29,0:29:81.26:0,81,1174	0/0:16,0:16:48.16:0,48,706	0/0:21,0:21:51.15:0,51,713	0/0:16,0:16:42.10:0,42,594	0/0:26,0:26:78.25:0,78,1129	0/0:20,0:20:54.18:0,54,795	0/0:27,0:27:78.26:0,78,1148	0/0:10,0:10:30.10:0,30,442
chr10	72857031	.	G	GGT	1218.61	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.507;DP=582;FS=2.571;HRun=0;HaplotypeScore=76.2199;InbreedingCoeff=0.9950;MQ=87.53;MQ0=0;MQRankSum=-6.629;QD=46.87;ReadPosRankSum=-1.059;VQSLOD=4.6439;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:16:48.16:874,48,0	0/0:6,0:6:18.05:0,18,270	0/0:24,0:24:44.42:0,44,997	0/0:22,0:22:60.34:0,60,922	0/0:18,0:18:54.16:0,54,839	0/0:17,0:17:51.17:0,51,830	0/0:25,0:25:72.22:0,72,1119	0/0:33,0:33:99:0,99,1572	0/0:20,0:20:57.17:0,57,883	0/0:24,0:24:69.24:0,69,1123	0/0:22,0:22:66.21:0,66,1039	0/0:15,0:15:45.15:0,45,734	0/0:26,0:26:78.22:0,78,1191	0/0:26,0:26:78.25:0,78,1247	0/0:28,0:28:84.27:0,84,1344	0/0:24,0:24:72.19:0,72,1099	0/0:27,0:27:78.19:0,78,1163	1/1:1,8:9:27.09:466,27,0	0/0:15,0:15:42.14:0,42,685	0/0:19,0:19:54.16:0,54,834	0/0:29,0:29:87.25:0,87,1339	0/0:14,0:14:42.12:0,42,625	0/0:21,0:21:60.20:0,60,944	0/0:15,0:15:42.14:0,42,685	0/0:26,0:26:75.26:0,75,1222	0/0:22,0:22:60.19:0,60,935	0/0:28,0:28:84.29:0,84,1369	0/0:10,0:10:30.10:0,30,485
chr10	72857351	.	G	GGT	6452.37	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=10.113;DP=878;FS=2.933;HRun=0;HaplotypeScore=155.4486;InbreedingCoeff=0.9980;MQ=66.07;MQ0=8;MQRankSum=-3.638;QD=27.34;ReadPosRankSum=0.624;VQSLOD=6.1775;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:89.96:0,90,1089	0/0:12,0:13:29.91:0,30,336	0/0:47,0:23:29.65:0,30,327	0/0:45,0:30:40.17:0,40,617	0/0:28,0:28:63.18:0,63,766	0/0:27,0:27:75.24:0,75,937	0/0:27,0:27:72.16:0,72,872	0/0:34,0:33:78.23:0,78,949	0/0:31,0:31:84.22:0,84,1009	1/1:19,12:32:74.60:1111,75,0	1/1:8,4:12:17.82:285,18,0	1/1:18,15:34:68.63:933,69,0	1/1:12,18:30:70.47:1054,70,0	0/0:38,0:39:96.12:0,96,1159	0/0:39,0:39:93.28:0,93,1149	0/0:38,0:38:99:0,102,1233	1/1:13,9:22:32.96:476,33,0	0/0:19,0:19:44.88:0,45,526	0/0:26,0:25:48.14:0,48,587	0/0:23,0:23:57.18:0,57,709	0/0:89,0:89:99:0,211,2554	1/1:12,19:31:36.12:557,36,0	1/1:8,12:21:23.38:330,23,0	1/1:14,24:38:77.10:1195,77,0	1/1:10,5:15:33.11:510,33,0	0/0:28,0:28:69.22:0,69,859	0/0:31,0:31:79.48:0,79,963	0/0:14,0:14:36.11:0,36,448
chr10	72857365	.	A	AGT	5513.83	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=11.134;DP=916;FS=0.745;HRun=0;HaplotypeScore=165.1216;InbreedingCoeff=0.8796;MQ=57.37;MQ0=20;MQRankSum=-3.376;QD=18.50;ReadPosRankSum=0.395;VQSLOD=5.1009;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:43:61.42:0,61,288	0/0:10,0:11:25.94:0,26,273	0/1:53,0:17:57.16:86,0,57	0/0:50,0:23:2.77:0,3,124	0/0:25,0:25:69.04:0,69,810	0/0:33,0:33:75.22:0,75,897	0/0:33,0:33:66.16:0,66,799	0/0:47,0:43:91.68:0,92,1109	0/0:33,0:33:87.08:0,87,1016	1/1:16,21:42:17.09:993,17,0	1/1:5,11:17:8.69:142,9,0	1/1:13,22:38:18.51:724,19,0	1/1:7,22:29:62.95:937,63,0	0/0:32,0:34:80.83:0,81,887	0/0:33,0:33:90.25:0,90,1071	0/0:38,0:38:90.16:0,90,1059	1/1:9,8:17:27.06:402,27,0	0/0:12,0:22:43.21:0,43,193	0/0:24,0:19:36.10:0,36,425	0/0:19,0:20:51.16:0,51,618	0/0:91,0:92:99:0,185,2159	1/1:11,12:23:32.15:498,32,0	1/1:2,19:21:20.34:287,20,0	1/1:17,21:38:70.15:1078,70,0	1/1:14,5:19:24.08:367,24,0	0/0:32,0:31:84.25:0,84,1003	0/0:33,0:33:81.25:0,81,981	0/0:13,0:13:27.08:0,27,327
chr10	72857474	.	ATG	A	1667.65	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.102;DP=1105;FS=18.729;HRun=0;HaplotypeScore=144.2277;InbreedingCoeff=0.9940;MQ=57.69;MQ0=20;MQRankSum=2.372;QD=25.27;ReadPosRankSum=1.723;VQSLOD=3.2424;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,25:36:75.24:973,75,0	0/0:17,0:17:48.16:0,48,816	0/0:42,1:17:25.08:0,25,583	0/0:40,0:19:17.19:0,17,518	0/0:28,0:28:66.23:0,66,1110	0/0:29,0:29:71.15:0,71,1187	0/0:37,0:34:90.28:0,90,1470	0/0:62,0:58:99:0,123,1960	0/0:46,1:47:87.42:0,87,2052	0/0:53,0:53:99:0,132,2266	0/0:32,0:32:93.29:0,93,1513	0/0:48,0:48:99:0,117,1957	0/0:33,0:33:87.20:0,87,1402	0/0:48,0:48:99:0,141,2330	0/0:52,0:52:99:0,135,2227	0/0:43,0:43:99:0,111,1848	0/0:28,0:28:78.25:0,78,1298	1/1:3,24:26:63.20:816,63,0	0/0:29,0:25:57.17:0,57,918	0/0:40,0:40:99:0,114,1894	0/0:87,0:83:99:0,198,3325	0/0:37,0:37:93.07:0,93,1547	0/0:38,0:38:99:0,111,1853	0/0:42,0:42:93.14:0,93,1498	0/0:34,0:34:87.30:0,87,1465	0/0:50,0:50:99:0,138,2341	0/0:31,0:31:87.30:0,87,1462	0/0:11,0:11:33.11:0,33,561
chr10	72857534	.	A	ATG	1975.60	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.527;DP=1154;FS=2.537;HRun=0;HaplotypeScore=151.0682;InbreedingCoeff=0.9967;MQ=55.55;MQ0=12;MQRankSum=1.501;QD=25.66;ReadPosRankSum=-0.788;VQSLOD=4.0453;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,41:53:96.64:1561,97,0	0/0:11,0:11:24.08:0,24,311	0/0:40,0:14:33.06:0,33,404	0/0:48,0:21:33.08:0,33,398	0/0:32,0:32:90.23:0,90,1105	0/0:36,0:36:83.98:0,84,1007	0/0:39,0:36:87.23:0,87,1085	0/0:68,0:58:99:0,120,1504	0/0:49,0:49:99:0,129,1569	0/0:60,0:60:99:0,118,1884	0/0:29,0:29:81.25:0,81,1037	0/0:62,0:62:99:0,136,1809	0/0:35,0:35:84.22:0,84,1057	0/0:46,0:45:99:0,123,1521	0/0:45,0:45:99:0,129,1628	0/0:47,0:47:99:0,111,1428	0/0:33,0:33:81.26:0,81,1051	1/1:15,9:24:21.84:536,22,0	0/0:25,0:22:48.10:0,48,574	0/0:40,0:40:99:0,102,1324	0/0:80,0:79:99:0,175,2427	0/0:41,0:41:99:0,105,1307	0/0:40,0:40:99:0,105,1319	0/0:50,0:49:99:0,129,1633	0/0:29,0:29:72.20:0,72,897	0/0:54,0:54:99:0,147,1848	0/0:25,0:25:69.22:0,69,888	0/0:13,0:13:30.08:0,30,374
chr10	72857856	.	G	GTT	4722.49	PASS	AB=0.642;AC=17;AF=0.304;AN=56;BaseQRankSum=-0.004;DP=744;FS=0.671;HRun=10;HaplotypeScore=113.5722;InbreedingCoeff=0.9223;MQ=83.02;MQ0=0;MQRankSum=-0.442;QD=17.56;ReadPosRankSum=2.327;VQSLOD=3.6027;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:40:95.90:0,96,1013	0/0:15,0:15:38.98:0,39,382	0/0:46,0:41:65.54:0,66,584	0/0:34,0:26:33.72:0,34,300	0/0:31,0:31:71.99:0,72,703	0/0:28,0:28:75.15:0,75,760	0/0:28,0:28:81.18:0,81,821	0/0:29,0:32:65.30:0,65,683	0/0:16,0:17:41.83:0,42,479	0/1:15,0:34:10.13:143,0,10	1/1:4,0:30:29.31:169,29,0	1/1:8,22:32:28.44:748,28,0	1/1:4,23:29:60.66:858,61,0	0/0:20,0:20:54.10:0,54,542	0/0:31,0:32:80.85:0,81,788	0/0:16,0:17:47.84:0,48,469	1/1:1,0:30:28.33:163,28,0	0/0:15,0:15:36.06:0,36,364	0/0:22,0:24:56.65:0,57,545	0/0:31,0:33:71.31:0,71,822	0/0:12,0:12:27.04:0,27,275	1/1:5,21:28:64.47:875,64,0	1/1:6,25:32:60.20:894,60,0	1/1:4,17:24:53.66:749,54,0	1/1:4,0:30:34.93:123,35,0	0/0:15,0:16:41.82:0,42,409	0/0:24,0:24:56.35:0,56,631	0/0:9,0:10:23.78:0,24,225
chr10	72859327	.	G	GCACA	6829.72	PASS	AB=0.777;AC=22;AF=0.393;AN=56;BaseQRankSum=8.693;DP=857;FS=4.443;HRun=0;HaplotypeScore=175.2532;InbreedingCoeff=0.8187;MQ=65.17;MQ0=16;MQRankSum=-3.283;QD=19.02;ReadPosRankSum=-0.177;VQSLOD=4.4192;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:43:11.84:106,12,0	0/0:9,0:11:21.06:0,21,297	0/0:42,0:23:12.03:0,12,157	0/0:59,0:34:35.16:0,35,495	0/0:26,0:29:41.55:0,42,780	0/0:25,0:29:44.53:0,45,770	0/0:29,0:30:60.13:0,60,847	0/0:29,0:30:19.03:0,19,469	0/0:22,0:26:33.67:0,34,699	1/1:11,4:37:62.47:844,62,0	1/1:5,3:20:14.79:263,15,0	1/1:13,8:24:52.77:913,53,0	1/1:11,15:28:35.69:811,36,0	0/0:26,0:30:66.21:0,66,1024	0/0:26,0:30:69.22:0,69,1071	0/0:25,0:30:18.79:0,19,965	1/1:9,2:28:27.01:476,27,0	1/1:8,0:17:6.02:105,6,0	0/0:19,0:19:33.08:0,33,470	0/0:24,0:29:63.17:0,63,935	0/0:48,0:61:99:0,102,1443	1/1:18,15:37:16.60:1146,17,0	0/1:6,9:17:25.21:366,0,25	1/1:23,12:43:78.84:1275,79,0	1/1:16,2:29:23.98:460,24,0	0/1:32,0:36:65.28:65,0,822	0/0:25,0:29:53.74:0,54,746	0/0:11,0:12:30.09:0,30,463
chr10	72859452	.	CACAT	C	1427.33	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=12.735;DP=784;FS=2.097;HRun=0;HaplotypeScore=163.5955;InbreedingCoeff=0.4079;MQ=57.56;MQ0=15;MQRankSum=-2.135;QD=3.85;ReadPosRankSum=0.020;VQSLOD=2.2456;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:38.81:306,39,0	0/0:7,0:7:17.93:0,18,196	0/0:33,0:15:35.83:0,36,346	0/0:42,0:18:3.85:0,4,246	0/1:22,0:22:6.09:6,0,947	0/0:23,0:23:42.46:0,42,722	0/0:28,0:28:77.98:0,78,1188	0/1:28,0:28:43.06:43,0,543	0/0:28,0:28:59.13:0,59,1211	0/1:31,0:31:94.75:95,0,231	0/0:17,0:17:10.93:0,11,181	1/1:27,1:28:59.60:403,60,0	1/1:31,1:32:23.56:154,24,0	0/0:25,0:25:41.79:0,42,1074	0/0:33,0:32:51.66:0,52,1329	0/0:34,0:34:59.24:0,59,1572	0/1:26,0:26:59.13:59,0,249	0/1:13,0:13:15.17:15,0,134	0/0:15,0:15:38.66:0,39,549	0/0:20,0:20:56.95:0,57,949	0/0:62,0:62:86.58:0,87,2000	1/1:33,1:34:17.47:69,17,0	1/1:25,0:24:5.15:65,5,0	1/1:64,1:64:72.59:343,73,0	0/1:14,0:14:38.58:39,0,85	0/1:32,0:32:21.49:21,0,974	0/0:25,0:25:20.11:0,20,972	0/0:21,0:21:33.79:0,34,995
chr10	72859454	.	CAT	C	3656.18	PASS	AB=0.961;AC=18;AF=0.321;AN=56;BaseQRankSum=9.960;DP=779;FS=7.616;HRun=0;HaplotypeScore=132.7862;InbreedingCoeff=0.4713;MQ=57.10;MQ0=15;MQRankSum=0.802;QD=10.95;ReadPosRankSum=-0.423;VQSLOD=3.0795;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:38.76:292,39,0	0/1:7,0:7:27.85:28,0,90	0/0:33,0:15:35.83:0,36,346	0/0:40,0:16:3.85:0,4,246	0/0:21,0:21:15.86:0,16,680	0/0:24,0:24:18.63:0,19,525	0/0:28,0:28:71.31:0,71,926	0/1:18,8:26:61.35:61,0,437	0/0:27,0:27:16.49:0,16,823	0/1:28,0:28:17.80:18,0,279	0/0:19,0:19:21.26:0,21,172	1/1:17,10:27:71.83:765,72,0	1/1:3,26:29:27.05:364,27,0	0/0:25,0:25:47.91:0,48,744	0/0:34,0:33:4.77:0,5,905	0/0:33,0:33:54.24:0,54,1107	0/1:28,0:28:74.76:75,0,273	0/1:13,0:13:2.31:2,0,113	0/0:19,0:19:47.89:0,48,502	0/0:20,0:20:56.95:0,57,727	0/0:61,0:61:94.23:0,94,1500	1/1:4,29:33:23.81:355,24,0	1/1:0,25:24:26.98:379,27,0	1/1:8,58:65:84.27:1249,84,0	0/0:14,0:14:12.12:0,12,114	0/1:32,0:32:68.13:68,0,675	0/0:25,0:25:5.11:0,5,651	0/0:21,0:21:14.57:0,15,657
chr10	72859456	.	TACACAC	T	1530.13	PASS	AB=0.883;AC=10;AF=0.179;AN=56;BaseQRankSum=3.825;DP=790;FS=8.445;HRun=0;HaplotypeScore=193.7963;InbreedingCoeff=0.4843;MQ=56.26;MQ0=15;MQRankSum=-3.813;QD=9.56;ReadPosRankSum=0.395;VQSLOD=1.9533;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:10.12:34,0,10	0/0:4,0:7:12.04:0,12,246	0/0:32,0:13:2.97:0,3,20	0/0:41,0:14:3.01:0,3,38	0/0:19,0:21:46.52:0,47,1094	0/0:25,0:25:33.06:0,33,760	0/0:28,0:28:48.15:0,48,1210	0/0:28,0:28:35.85:0,36,592	0/0:23,0:27:51.15:0,51,1413	1/1:9,17:29:48.99:794,49,0	0/1:9,10:19:11.97:57,0,12	0/0:27,0:27:7.17:0,7,359	0/1:29,0:29:3.51:4,0,171	0/0:21,0:24:41.38:0,41,1162	0/0:31,0:32:72.88:0,73,1601	0/0:35,0:35:87.08:0,87,2055	1/1:23,3:27:31.62:349,32,0	0/1:12,2:14:69.33:158,0,69	0/0:20,0:19:33.03:0,33,650	0/0:21,0:21:30.09:0,30,886	0/0:57,0:61:94.44:0,94,2192	0/0:33,0:33:29.94:0,30,279	0/0:26,0:25:26.71:0,27,268	0/0:65,0:63:70:0,70,768	1/1:10,4:14:14.85:291,15,0	0/0:31,0:31:54.93:0,55,1117	0/0:22,0:25:42.50:0,42,1143	0/0:19,0:20:44.92:0,45,1098
chr10	72859787	.	T	TACAGAGCACGC	32056.42	PASS	AB=0.973;AC=23;AF=0.411;AN=56;BaseQRankSum=-9.888;DP=882;FS=1.733;HRun=0;HaplotypeScore=263.7102;InbreedingCoeff=0.9237;MQ=80.63;MQ0=0;MQRankSum=-19.414;QD=75.78;ReadPosRankSum=2.825;VQSLOD=4.2620;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,33:65:54.15:3037,54,0	0/0:9,0:9:27.09:0,27,819	0/0:27,0:27:63.22:0,63,1843	0/0:28,0:28:66.14:0,66,1716	0/0:25,0:25:75.24:0,75,2418	0/0:29,0:29:87.30:0,87,2908	0/0:17,0:17:51.18:0,51,1652	0/0:33,0:33:81.26:0,81,2493	0/0:38,0:38:99:0,102,3279	1/1:19,20:45:99:5684,117,0	1/1:14,7:23:15.05:843,15,0	1/1:15,20:37:78.27:4106,78,0	1/1:15,24:39:84.29:4327,84,0	0/0:28,0:28:78.27:0,78,2538	0/0:33,0:33:90.30:0,90,2932	0/0:26,0:26:72.25:0,72,2439	1/1:12,11:26:33.11:1659,33,0	1/1:12,9:25:45.15:2320,45,0	0/0:29,0:29:69.19:0,69,2120	0/0:31,0:31:81.26:0,81,2576	0/0:57,0:57:99:0,160,5287	1/1:17,19:38:51.17:2845,51,0	1/1:7,22:32:59.33:3363,59,0	1/1:9,21:34:33.11:1850,33,0	1/1:4,17:22:33.11:1856,33,0	0/1:35,1:36:99:166,0,2927	0/0:27,0:27:78.25:0,78,2589	0/0:22,0:22:57.20:0,57,1893
chr10	72861037	.	CTCTCTCTCTCTCTCTCTCTT	C	510.26	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=3.097;DP=472;FS=8.723;HRun=0;HaplotypeScore=188.4899;InbreedingCoeff=0.0410;MQ=58.81;MQ0=22;MQRankSum=-0.929;QD=4.05;ReadPosRankSum=-1.722;VQSLOD=1.7859;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:36:89.01:371,0,89	0/0:11,0:11:27.09:0,27,1440	0/0:18,0:5:6.39:0,6,54	0/0:43,0:22:13.82:0,14,249	0/0:10,0:10:18.50:0,18,389	0/0:14,0:13:26.97:0,27,729	0/0:23,0:22:60.13:0,60,2356	0/0:18,0:17:40.83:0,41,855	0/0:23,0:23:60.66:0,61,3692	0/1:13,0:13:48.32:48,0,1244	0/0:3,0:3:3.48:0,3,51	0/1:13,0:13:5.43:5,0,664	0/0:10,0:10:12.03:0,12,392	0/0:12,0:11:24.08:0,24,1572	0/0:13,0:12:36.11:0,36,2157	0/0:15,0:15:32.58:0,33,1364	0/1:25,0:25:13.66:14,0,2201	1/1:0,13:13:3.01:171,3,0	0/0:17,0:17:50.72:0,51,1796	0/0:11,0:11:28.88:0,29,738	0/0:23,0:22:46.70:0,47,2007	0/0:18,0:17:15.98:0,16,456	0/0:12,0:12:2.65:0,3,991	0/1:26,0:25:22.15:22,0,1544	0/0:7,0:6:3.48:0,3,179	0/0:15,0:14:41.68:0,42,1316	0/0:15,0:15:34.01:0,34,1335	0/0:15,0:9:23.49:0,23,488
chr10	72861041	.	CTCTCTCTCTCTCTCTTTT	C	613.96	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.087;DP=470;FS=2.967;HRun=0;HaplotypeScore=175.8301;InbreedingCoeff=0.6985;MQ=59.51;MQ0=21;MQRankSum=-0.693;QD=11.58;ReadPosRankSum=0.435;VQSLOD=2.5441;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,25:40:9.97:601,10,0	0/0:12,0:12:30.10:0,30,1198	0/0:18,0:6:15.48:0,15,190	0/0:46,0:24:9.78:0,10,450	0/0:11,0:11:24.55:0,25,521	0/0:15,0:14:33.80:0,34,799	0/0:22,0:21:51.16:0,51,2032	0/0:13,0:12:36.12:0,36,883	0/0:23,0:23:60.68:0,61,3219	0/0:14,0:14:23.72:0,24,1033	0/0:3,0:3:1.55:0,2,4	0/0:13,0:13:28.08:0,28,485	0/0:9,0:9:9.03:0,9,269	0/0:12,0:11:27.09:0,27,1387	0/0:13,0:12:33.11:0,33,1882	0/0:15,0:15:34.21:0,34,1163	0/0:24,0:24:52.21:0,52,1946	1/1:13,0:13:3.01:114,3,0	0/0:17,0:17:50.64:0,51,1581	0/0:11,0:11:31.07:0,31,756	0/0:24,0:23:53.96:0,54,1652	0/0:16,0:15:18.87:0,19,298	0/0:12,0:12:26.11:0,26,746	0/0:26,0:25:48.62:0,49,1216	0/0:6,0:5:3.48:0,3,176	0/0:15,0:14:42.10:0,42,1249	0/0:12,0:12:27.56:0,28,1172	0/0:15,0:9:24.97:0,25,474
chr10	72861047	.	CTCTCTCTCTT	C	954.26	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=3.291;DP=474;FS=1.172;HRun=0;HaplotypeScore=123.8453;InbreedingCoeff=0.2123;MQ=67.35;MQ0=17;MQRankSum=-0.282;QD=4.82;ReadPosRankSum=0.626;VQSLOD=2.1698;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:12.04:264,12,0	0/0:10,0:10:21.94:0,22,355	0/0:23,0:11:12.67:0,13,167	0/1:54,0:30:13.37:13,0,215	0/0:12,0:12:27.49:0,27,262	0/0:15,0:15:34.70:0,35,445	0/0:19,0:18:50.87:0,51,961	0/0:15,0:15:44.21:0,44,387	0/0:25,0:25:66.62:0,67,1753	0/1:14,0:14:99:162,0,380	0/0:3,0:3:0.47:0,0,1	1/1:13,0:13:8.45:192,8,0	0/1:10,0:10:27.78:28,0,38	0/0:13,0:12:27.03:0,27,680	0/0:13,0:12:36.09:0,36,927	0/0:16,0:16:32.55:0,33,571	0/1:24,0:24:99:182,0,648	1/1:13,0:13:3.01:81,3,0	0/0:18,0:18:53.64:0,54,843	0/0:11,0:11:29.54:0,30,324	0/0:24,0:23:49.78:0,50,592	0/0:5,11:15:3.48:0,3,49	0/1:13,0:13:24.95:25,0,192	0/1:25,0:24:99:146,0,157	0/1:7,0:6:18.42:18,0,43	0/0:17,0:16:17.43:0,17,679	0/0:14,0:14:36.03:0,36,666	0/0:12,0:8:19.44:0,19,144
chr10	72861049	.	CTCTCTCTT	C	1132.26	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=2.683;DP=467;FS=1.765;HRun=0;HaplotypeScore=108.9913;InbreedingCoeff=0.4249;MQ=69.36;MQ0=16;MQRankSum=0.294;QD=5.75;ReadPosRankSum=1.285;VQSLOD=2.2470;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:12.04:208,12,0	0/0:9,0:9:24.44:0,24,260	0/0:25,0:13:14.41:0,14,177	0/1:56,0:32:14.14:14,0,257	0/0:13,0:13:27.08:0,27,226	0/0:14,0:14:34.70:0,35,393	0/0:20,0:19:53.86:0,54,810	0/0:15,0:15:44.04:0,44,392	0/0:24,0:24:63.62:0,64,1363	0/1:15,0:15:99:188,0,253	0/0:3,0:3:0.47:0,0,1	1/1:11,0:11:26.52:213,27,0	1/1:2,8:10:2.81:81,3,0	0/0:12,0:11:27.02:0,27,551	0/0:13,0:12:36.08:0,36,738	0/0:16,0:16:29.55:0,30,417	0/1:24,0:24:99:203,0,398	1/1:13,0:13:3.01:67,3,0	0/0:18,0:18:50.68:0,51,677	0/0:12,0:12:32.53:0,33,302	0/0:23,0:22:40.75:0,41,431	0/0:12,0:12:3.15:0,3,11	0/1:11,0:11:52.77:71,0,53	1/1:25,0:24:11.81:237,12,0	0/1:7,0:6:17.11:18,0,17	0/0:16,0:15:15.21:0,15,582	0/0:14,0:14:36.02:0,36,515	0/0:11,0:7:16.55:0,17,134
chr10	72861241	.	TTG	T	237.48	PASS	AB=0.916;AC=11;AF=0.196;AN=56;BaseQRankSum=4.640;DP=605;FS=2.308;HRun=0;HaplotypeScore=86.2566;InbreedingCoeff=-0.0186;MQ=67.08;MQ0=9;MQRankSum=-0.860;QD=0.93;ReadPosRankSum=-0.656;VQSLOD=1.7002;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:22,11:33:20.75:139,21,0	0/0:15,0:15:3.33:0,3,308	0/0:23,0:10:9.92:0,10,138	0/0:25,0:17:17.65:0,18,245	0/0:22,0:21:54.12:0,54,794	0/0:19,0:19:0.95:0,1,470	0/1:26,2:28:4.14:4,0,847	0/1:19,1:20:40.92:41,0,124	0/1:26,2:28:2.07:2,0,854	0/0:20,0:20:16.97:0,17,325	0/0:17,0:16:28.85:0,29,305	0/1:24,0:24:1.96:2,0,438	0/0:18,0:18:48.11:0,48,724	0/0:16,0:16:45.12:0,45,675	0/0:15,0:15:39.13:0,39,610	0/1:21,3:24:19.16:19,0,633	0/0:28,0:31:30.91:0,31,376	0/0:5,0:15:10.82:0,11,83	0/0:20,0:19:33.07:0,33,481	0/0:22,0:22:27.21:0,27,532	0/1:21,5:26:86.54:87,0,574	0/0:21,0:21:51.14:0,51,741	0/1:14,3:17:25.22:25,0,508	0/0:30,0:30:42.54:0,43,1023	0/0:20,0:20:34.75:0,35,390	0/1:33,4:36:49.92:50,0,1038	0/1:16,1:17:8.08:8,0,348	0/0:2,0:2:6.02:0,6,94
chr10	72861266	.	T	TG	248.40	PASS	AB=0.845;AC=4;AF=0.071;AN=56;BaseQRankSum=7.449;DP=665;FS=2.491;HRun=1;HaplotypeScore=85.8967;InbreedingCoeff=-0.0816;MQ=58.42;MQ0=19;MQRankSum=2.345;QD=2.82;ReadPosRankSum=4.010;VQSLOD=-0.0594;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:23.39:0,23,112	0/0:11,0:11:33.09:0,33,434	0/0:31,0:13:27.54:0,28,337	0/0:27,0:13:39.03:0,39,464	0/0:24,0:23:60.09:0,60,803	0/0:20,0:20:60.12:0,60,774	0/0:32,0:32:96.22:0,96,1252	0/0:31,0:31:84.04:0,84,1019	0/0:26,0:26:35.18:0,35,953	0/1:21,2:22:80.42:80,0,141	0/1:13,3:15:36.60:37,0,71	0/0:20,0:20:46.35:0,46,599	0/0:22,0:22:63.21:0,63,861	0/0:20,0:19:57.18:0,57,765	0/0:22,0:22:60.20:0,60,821	0/0:30,0:30:78.17:0,78,1006	0/1:25,5:30:99:115,0,114	0/0:18,0:17:17.84:0,18,269	0/0:21,0:18:45.13:0,45,588	0/0:22,0:21:55.06:0,55,739	0/0:25,0:25:72.04:0,72,866	0/0:26,0:26:72.10:0,72,887	0/0:22,0:22:63.02:0,63,777	0/0:36,0:35:94.46:0,94,1234	0/1:13,6:19:84.39:126,0,84	0/0:35,0:34:99:0,99,1277	0/0:16,0:16:45.08:0,45,574	0/0:2,0:2:6.02:0,6,84
chr10	72861267	.	T	TG	253.05	PASS	AB=0.875;AC=5;AF=0.089;AN=56;BaseQRankSum=7.414;DP=664;FS=3.457;HRun=0;HaplotypeScore=86.9722;InbreedingCoeff=-0.1022;MQ=58.40;MQ0=18;MQRankSum=2.626;QD=2.01;ReadPosRankSum=2.874;VQSLOD=2.2903;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:39:20.11:20,0,59	0/0:11,0:11:33.09:0,33,441	0/0:31,0:13:30.52:0,31,352	0/0:25,0:13:39.04:0,39,466	0/0:24,0:23:63.10:0,63,830	0/0:20,0:20:57.19:0,57,782	0/0:31,0:31:93.31:0,93,1275	0/0:31,0:31:90.24:0,90,1142	0/0:27,0:27:76.13:0,76,1026	0/1:20,2:21:58.36:58,0,134	0/1:13,3:15:36.60:37,0,71	0/0:20,0:20:51.58:0,52,638	0/0:21,0:21:63.21:0,63,876	0/0:20,0:19:57.18:0,57,775	0/0:22,0:22:66.20:0,66,885	0/0:30,0:30:81.21:0,81,1069	0/1:25,5:30:99:130,0,134	0/0:19,0:18:30.07:0,30,370	0/0:21,0:18:46.95:0,47,589	0/0:22,0:21:60.07:0,60,778	0/0:24,0:24:69.14:0,69,916	0/0:25,0:25:69.03:0,69,872	0/0:25,0:25:60.18:0,60,807	0/0:35,0:34:92.75:0,93,1234	0/1:13,6:19:85.20:126,0,85	0/0:35,0:34:99:0,99,1334	0/0:16,0:16:45.12:0,45,604	0/0:2,0:2:6.02:0,6,84
chr10	72861414	.	T	TTTCATTCA	3680.42	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=4.534;DP=610;FS=0.000;HRun=0;HaplotypeScore=155.8070;InbreedingCoeff=0.7873;MQ=68.56;MQ0=1;MQRankSum=-9.160;QD=26.48;ReadPosRankSum=-3.061;VQSLOD=2.4412;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:11.64:0,12,75	0/0:12,0:12:24.08:0,24,574	0/0:18,0:17:3:0,3,40	0/0:16,0:14:3.01:0,3,38	0/0:23,0:23:33.11:0,33,799	0/0:16,0:16:39.12:0,39,913	0/0:30,0:30:48.16:0,48,1127	0/0:35,0:35:18.06:0,18,321	0/0:20,0:20:36.12:0,36,829	0/0:21,0:22:30.07:0,30,589	0/0:17,0:17:33.11:0,33,730	1/1:17,5:24:39.13:1529,39,0	1/1:14,6:22:18.06:664,18,0	0/1:25,0:25:65.33:65,0,1119	0/0:18,0:18:36.12:0,36,835	0/0:21,0:22:33.10:0,33,740	0/0:21,0:21:36.12:0,36,864	0/0:13,0:13:18.06:0,18,423	0/0:17,0:17:18.06:0,18,410	0/0:26,0:27:39.12:0,39,878	0/0:25,0:25:42.14:0,42,1012	1/1:20,2:23:15.03:424,15,0	1/1:18,3:21:9.03:266,9,0	1/1:15,6:24:24.06:731,24,0	0/0:20,0:20:36.12:0,36,830	0/0:35,0:35:63.21:0,63,1472	0/0:29,0:29:54.19:0,54,1325	0/0:14,0:14:18.05:0,18,399
chr10	72861620	.	TACAA	T	3954.46	PASS	AB=0.964;AC=12;AF=0.214;AN=56;BaseQRankSum=12.285;DP=733;FS=0.000;HRun=0;HaplotypeScore=118.8416;InbreedingCoeff=0.7827;MQ=70.43;MQ0=6;MQRankSum=-0.111;QD=18.65;ReadPosRankSum=1.953;VQSLOD=3.4421;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:49.01:0,49,1071	0/0:15,0:15:30.10:0,30,719	0/0:25,0:22:12.04:0,12,275	0/1:37,1:34:17.81:18,0,583	0/0:27,0:27:54.14:0,54,1222	0/0:23,0:23:42.14:0,42,998	0/0:37,0:37:60.21:0,60,1437	0/0:33,0:33:39.13:0,39,883	0/0:19,0:19:42.14:0,42,1004	0/0:30,0:29:54.19:0,54,1273	0/0:25,0:25:36.12:0,36,863	1/1:18,23:41:54.18:856,54,0	1/1:6,6:12:21.07:335,21,0	0/1:20,1:21:11.78:12,0,712	0/0:20,0:20:42.14:0,42,992	0/0:23,0:23:63.20:0,63,1458	0/0:32,0:32:61.45:0,61,1441	0/0:21,0:21:35.61:0,36,763	0/0:26,0:26:43.39:0,43,1010	0/0:15,0:15:33.11:0,33,791	0/0:31,1:32:15.32:0,15,1385	1/1:10,27:37:69.24:1102,69,0	1/1:9,19:28:48.16:767,48,0	1/1:10,25:32:15.67:866,16,0	0/0:23,0:23:39.13:0,39,931	0/0:26,0:25:48.16:0,48,1106	0/0:28,0:28:66.23:0,66,1553	0/0:12,0:12:30.10:0,30,715
chr10	72862629	.	GATATATATATATATATATATAT	G	246.31	PASS	AC=2;AF=0.063;AN=32;BaseQRankSum=2.027;DP=171;FS=3.070;HRun=0;HaplotypeScore=94.1626;InbreedingCoeff=0.2347;MQ=66.41;MQ0=3;MQRankSum=-2.027;QD=15.39;ReadPosRankSum=-0.617;VQSLOD=1.3830;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,9:15:6.02:323,6,0	./.	0/0:3,0:3:2.84:0,3,14	0/0:3,0:2:3.01:0,3,40	./.	0/0:5,0:5:9.03:0,9,227	./.	0/0:18,0:17:33.11:0,33,819	./.	0/0:4,0:4:3.01:0,3,119	./.	0/0:4,0:5:3.01:0,3,88	./.	./.	./.	0/0:3,0:3:3.01:0,3,80	0/0:20,0:23:48.16:0,48,3167	0/0:19,0:25:48.12:0,48,2082	0/0:9,0:9:12.03:0,12,286	./.	./.	./.	./.	0/0:3,0:4:2.97:0,3,20	0/0:7,0:9:12.04:0,12,623	0/0:2,0:2:3.01:0,3,308	0/0:3,0:3:3.01:0,3,221	0/0:10,0:11:18.06:0,18,1060
chr10	72865660	.	CG	C	2043.66	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.388;DP=768;FS=2.471;HRun=1;HaplotypeScore=84.6042;InbreedingCoeff=0.9997;MQ=90.74;MQ0=0;MQRankSum=-4.314;QD=36.49;ReadPosRankSum=3.192;VQSLOD=4.1380;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,56:56:99:2139,154,0	0/0:12,0:12:33.08:0,33,500	0/0:28,0:28:73.20:0,73,1064	0/0:31,0:32:84.22:0,84,1283	0/0:21,0:21:63.20:0,63,977	0/0:20,0:20:60.20:0,60,954	0/0:33,0:33:99:0,99,1513	0/0:36,0:36:99:0,108,1594	0/0:20,0:20:60.20:0,60,956	0/0:33,0:33:96.27:0,96,1454	0/0:22,0:22:66.14:0,66,965	0/0:23,0:23:69.22:0,69,993	0/0:32,0:32:96.28:0,96,1366	0/0:28,0:28:84.27:0,84,1300	0/0:25,0:25:75.26:0,75,1193	0/0:26,0:26:75.23:0,75,1148	0/0:32,0:32:96.33:0,96,1531	0/0:30,0:30:90.31:0,90,1436	0/0:29,0:29:87.30:0,87,1386	0/0:17,0:17:50.93:0,51,724	0/0:30,0:30:87.30:0,87,1385	0/0:23,0:23:63.11:0,63,870	0/0:26,0:26:75.20:0,75,1052	0/0:40,0:40:99:0,120,1740	0/0:25,0:25:75.22:0,75,1170	0/0:37,0:37:99:0,105,1607	0/0:17,0:16:48.16:0,48,765	0/0:15,0:15:45.15:0,45,716
chr10	72866599	.	G	GTCCC	907.96	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=6.467;DP=402;FS=4.308;HRun=0;HaplotypeScore=77.6764;InbreedingCoeff=0.7354;MQ=77.52;MQ0=0;MQRankSum=-2.645;QD=9.66;ReadPosRankSum=-0.867;VQSLOD=2.1238;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:36.55:427,37,0	0/0:5,0:5:15.03:0,15,246	0/0:16,0:17:14.53:0,15,281	0/0:14,0:13:21.26:0,21,284	0/0:14,0:14:39.03:0,39,607	0/0:23,0:23:63.17:0,63,1052	0/0:21,0:21:63.18:0,63,1082	0/0:11,0:11:21.03:0,21,220	0/0:19,0:19:48.15:0,48,828	0/1:10,0:10:0.94:1,0,80	0/0:3,0:3:0.94:0,1,2	1/1:0,7:7:3.01:75,3,0	1/1:6,0:6:5.64:31,6,0	0/0:20,0:20:54.10:0,54,892	0/0:19,0:19:48.16:0,48,870	0/0:19,0:19:48.08:0,48,803	0/0:28,0:27:20.77:0,21,141	0/1:9,0:9:12.21:12,0,33	0/0:18,0:18:51.99:0,52,788	0/0:11,0:11:27.02:0,27,400	0/0:28,0:28:81.14:0,81,1167	1/1:3,0:3:8.98:132,9,0	1/1:7,0:7:11.97:166,12,0	1/1:14,0:14:23.70:221,24,0	1/1:7,0:8:3.63:19,4,0	0/0:12,0:12:32.98:0,33,425	0/0:14,0:14:36.11:0,36,631	0/0:11,0:11:24.08:0,24,439
chr10	72866600	.	T	TCC	1210.53	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=5.471;DP=405;FS=7.303;HRun=10;HaplotypeScore=64.8195;InbreedingCoeff=0.6868;MQ=75.25;MQ0=0;MQRankSum=-1.898;QD=7.47;ReadPosRankSum=-2.785;VQSLOD=-0.6104;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:36.04:359,36,0	0/0:5,0:5:15.03:0,15,151	0/1:16,0:15:26.95:27,0,101	0/1:14,0:13:12.74:13,0,104	0/0:14,0:14:32.72:0,33,316	0/0:23,0:23:54.08:0,54,549	0/0:21,0:21:54.09:0,54,549	0/0:10,0:11:2.96:0,3,30	0/0:19,0:19:42.04:0,42,420	1/1:6,4:11:15.01:196,15,0	1/1:1,3:4:9.03:134,9,0	1/1:9,0:9:3:26,3,0	0/1:7,0:7:0:0,0,0	0/0:19,0:20:38.78:0,39,449	0/0:17,0:19:47.83:0,48,463	0/0:19,0:19:44.99:0,45,430	1/1:6,20:27:32.45:351,32,0	1/1:4,0:9:0.89:2,1,0	0/0:18,0:18:38.20:0,38,378	0/0:11,0:11:17.99:0,18,176	0/0:28,0:28:51:0,51,505	1/1:5,0:5:6:61,6,0	1/1:8,0:8:6:55,6,0	1/1:14,0:14:8.87:62,9,0	1/1:7,0:7:9.02:115,9,0	0/0:12,0:12:14.96:0,15,152	0/0:14,0:14:33.05:0,33,336	0/0:9,0:9:24.03:0,24,236
chr10	72866602	.	C	CCT	1100.32	PASS	AB=0.990;AC=18;AF=0.321;AN=56;BaseQRankSum=8.175;DP=408;FS=2.779;HRun=0;HaplotypeScore=68.2588;InbreedingCoeff=0.4610;MQ=74.44;MQ0=0;MQRankSum=-1.554;QD=7.24;ReadPosRankSum=-0.089;VQSLOD=2.5903;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,29:34:19.63:599,20,0	0/0:5,0:5:15.05:0,15,229	0/1:15,1:15:9.36:9,0,284	0/0:12,0:11:21.94:0,22,240	0/0:16,0:16:39.57:0,40,534	0/0:22,0:22:63.19:0,63,904	0/0:22,0:22:66.17:0,66,925	0/0:11,0:11:21.03:0,21,210	0/0:18,0:18:48.14:0,48,693	0/1:11,0:11:51:51,0,69	1/1:5,0:5:8.87:61,9,0	1/1:9,0:9:3:28,3,0	0/1:7,0:7:17.07:22,0,17	0/0:19,0:19:53.74:0,54,747	0/0:18,0:18:48.15:0,48,712	0/0:19,0:19:54.07:0,54,741	0/1:28,0:27:76.20:76,0,83	0/1:11,0:11:10.17:10,0,36	0/0:19,0:19:54.08:0,54,715	0/0:12,0:12:30.01:0,30,369	0/0:29,0:29:81.15:0,81,1032	1/1:5,0:5:8.94:106,9,0	1/1:8,0:8:9.81:75,10,0	1/1:11,0:11:23.65:221,24,0	0/1:7,0:7:11.58:25,0,12	0/0:12,0:12:32.98:0,33,380	0/0:13,0:13:36.11:0,36,519	0/0:9,0:9:24.08:0,24,359
chr10	72867586	.	CTG	C	615.57	PASS	AB=0.987;AC=25;AF=0.481;AN=52;BaseQRankSum=6.006;DP=464;FS=14.634;HRun=0;HaplotypeScore=82.9087;InbreedingCoeff=0.2405;MQ=61.94;MQ0=32;MQRankSum=-4.227;QD=2.81;ReadPosRankSum=1.034;VQSLOD=0.5510;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:7:2.84:18,3,0	0/0:9,0:9:20.08:0,20,169	0/0:54,0:13:7.55:0,8,104	0/0:80,0:24:4.84:0,5,211	0/0:14,0:13:23.42:0,23,189	0/1:22,0:22:46.04:46,0,232	0/0:26,0:25:7.71:0,8,380	0/0:15,0:15:23.50:0,23,232	0/1:19,0:18:6.76:7,0,213	1/1:2,4:5:11.93:92,12,0	./.	1/1:5,0:4:2.82:19,3,0	1/1:3,0:2:2.80:13,3,0	0/0:13,0:12:20.89:0,21,207	0/1:18,1:18:57.64:58,0,152	0/1:18,0:17:30.87:31,0,287	1/1:12,1:13:25.87:175,26,0	1/1:10,0:10:26.81:200,27,0	0/1:17,0:17:3.14:3,0,224	0/0:15,4:19:17.83:0,18,191	0/1:12,0:13:3.29:3,0,128	0/1:6,0:5:0:0,0,0	./.	1/1:13,0:12:2.90:16,3,0	1/1:7,0:6:8.89:75,9,0	0/1:24,0:24:2.87:3,0,405	0/1:15,0:15:19.09:19,0,186	0/0:10,0:8:0.13:0,0,41
chr10	72867601	.	TTA	T	283.23	PASS	AB=0.884;AC=13;AF=0.241;AN=54;BaseQRankSum=7.661;DP=465;FS=4.358;HRun=0;HaplotypeScore=89.5965;InbreedingCoeff=0.0104;MQ=67.08;MQ0=23;MQRankSum=-3.236;QD=2.21;ReadPosRankSum=-2.671;VQSLOD=0.6320;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,4:7:5.88:51,6,0	0/0:9,0:9:17.24:0,17,478	0/0:68,0:22:26.44:0,26,675	0/0:90,0:29:26.12:0,26,769	0/0:12,2:14:30.10:0,30,597	0/1:21,1:22:77.99:78,0,658	0/0:28,0:27:72.21:0,72,1259	0/0:13,1:14:28.37:0,28,716	0/0:18,1:19:28.83:0,29,804	0/0:5,0:5:11.20:0,11,191	0/0:3,0:3:0:0,0,0	0/1:3,3:5:6.30:21,0,6	1/1:1,1:2:2.88:15,3,0	0/0:10,1:11:30.06:0,30,548	0/0:17,0:17:3.15:0,3,651	0/1:14,0:14:4.02:4,0,652	0/1:10,3:13:40.22:40,0,258	0/1:10,0:10:51.70:52,0,316	0/1:13,0:13:47.69:48,0,516	0/0:15,0:15:31.84:0,32,565	0/0:12,3:15:30.10:0,30,598	0/0:6,1:6:3.22:0,3,13	./.	0/0:11,2:12:2.61:0,3,12	0/0:5,1:6:9.03:0,9,163	0/1:19,1:20:86.67:87,0,786	0/1:11,2:13:13.32:13,0,395	0/1:4,3:7:18.50:19,0,129
chr10	72867618	.	C	CCACACACACA	2175.81	PASS	AB=0.889;AC=22;AF=0.423;AN=52;BaseQRankSum=3.856;DP=460;FS=1.685;HRun=0;HaplotypeScore=169.0346;InbreedingCoeff=0.7063;MQ=61.09;MQ0=14;MQRankSum=-3.932;QD=13.60;ReadPosRankSum=-2.662;VQSLOD=2.5629;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:17.58:377,18,0	0/0:9,0:9:12.04:0,12,300	./.	./.	0/0:18,0:18:24.08:0,24,643	0/0:24,0:24:35:0,35,804	0/0:29,0:29:45.09:0,45,1104	0/0:20,0:18:11.98:0,12,141	0/0:18,0:18:14.95:0,15,428	1/1:9,0:9:9.03:285,9,0	0/1:5,0:7:0.07:0,0,1	1/1:11,0:11:12.51:371,13,0	1/1:7,0:7:3.90:102,4,0	0/0:13,0:14:18.53:0,19,511	0/0:14,0:15:27.09:0,27,716	0/0:10,0:12:27.08:0,27,639	1/1:18,0:19:13.89:409,14,0	1/1:10,1:14:9.03:343,9,0	0/0:13,0:13:14.55:0,15,384	0/0:27,0:27:44.99:0,45,1094	0/0:13,0:13:6.02:0,6,178	1/1:6,1:10:6.02:238,6,0	1/1:9,0:7:3.01:90,3,0	1/1:14,0:17:2.99:42,3,0	1/1:5,0:9:3.01:90,3,0	0/1:21,0:21:8.14:8,0,640	0/0:7,0:11:9.50:0,9,210	0/0:7,0:7:9.03:0,9,267
chr10	72868573	.	GA	G	1765.58	PASS	AB=0.886;AC=17;AF=0.304;AN=56;BaseQRankSum=6.479;DP=664;FS=2.722;HRun=12;HaplotypeScore=77.5104;InbreedingCoeff=0.5852;MQ=63.01;MQ0=0;MQRankSum=1.169;QD=6.44;ReadPosRankSum=2.821;VQSLOD=2.5591;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:38:63.73:0,64,793	0/0:12,1:13:15.83:0,16,337	1/1:11,0:9:4.13:19,4,0	0/0:10,0:7:11.97:0,12,104	0/0:30,2:33:28.40:0,28,616	0/0:17,0:18:50.91:0,51,489	0/1:20,3:26:1.07:1,0,492	0/1:25,3:28:6.61:7,0,479	0/1:17,3:21:16.86:17,0,305	1/1:10,19:31:7.94:392,8,0	1/1:5,19:25:49.79:377,50,0	0/0:23,0:23:27.87:0,28,460	0/1:28,3:32:0.75:1,0,518	0/0:17,0:17:40.55:0,41,378	0/1:26,6:32:32.07:32,0,596	0/0:21,2:23:36.88:0,37,556	1/1:6,24:30:69.58:536,70,0	1/1:8,13:22:40.86:308,41,0	0/0:26,0:31:45.18:0,45,529	0/0:25,0:25:63.10:0,63,623	0/0:24,2:26:19.48:0,19,536	0/0:24,2:26:5.57:0,6,589	0/0:11,1:12:30.06:0,30,304	0/0:18,0:18:54.10:0,54,543	1/1:4,12:16:32.85:255,33,0	0/0:27,2:29:39.72:0,40,570	0/0:28,2:30:57.41:0,57,742	0/0:16,1:17:10.59:0,11,255
chr10	72870302	.	GCTT	G	1770.49	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.158;DP=693;FS=22.846;HRun=0;HaplotypeScore=150.0326;InbreedingCoeff=0.9929;MQ=77.92;MQ0=0;MQRankSum=-13.326;QD=13.72;ReadPosRankSum=3.092;VQSLOD=1.5769;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,14:27:47.86:420,48,0	0/0:10,0:10:30.10:0,30,691	0/0:16,0:16:12.71:0,13,593	0/0:23,0:23:54.08:0,54,1054	0/0:24,0:24:69.22:0,69,1530	0/0:22,0:22:66.22:0,66,1478	0/0:30,0:30:90.30:0,90,1987	0/0:38,0:38:99:0,105,2397	0/0:35,0:35:99:0,102,2352	0/0:36,0:36:99:0,102,2341	0/0:15,0:15:42.14:0,42,969	1/1:11,14:25:50.94:462,51,0	1/1:13,15:28:55.36:427,55,0	0/0:27,0:27:78.25:0,78,1750	0/0:23,0:23:66.20:0,66,1457	0/0:27,0:27:81.28:0,81,1868	0/0:34,0:34:99:0,102,2298	0/0:31,0:31:78.23:0,78,1717	0/0:24,0:24:69.24:0,69,1571	0/0:18,0:18:54.16:0,54,1158	0/0:50,0:50:99:0,147,3321	1/1:8,8:16:23.99:205,24,0	1/1:10,12:22:26.69:278,27,0	1/1:2,9:11:20.51:165,21,0	0/0:23,0:23:69.24:0,69,1592	0/0:23,0:23:66.23:0,66,1523	0/0:21,0:21:63.22:0,63,1450	0/0:14,0:14:39.13:0,39,899
chr10	72870311	.	A	AGGTGATAC	8296.88	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.494;DP=639;FS=37.767;HRun=0;HaplotypeScore=181.5205;InbreedingCoeff=0.9986;MQ=79.33;MQ0=0;MQRankSum=-13.651;QD=102.43;ReadPosRankSum=4.320;VQSLOD=3.5512;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:16:45.15:1708,45,0	0/0:11,0:11:33.11:0,33,1000	0/0:15,0:15:38.61:0,39,1000	0/0:23,0:23:59.55:0,60,1538	0/0:21,0:21:63.20:0,63,1842	0/0:21,0:21:63.22:0,63,1783	0/0:29,0:29:84.29:0,84,2522	0/0:43,0:43:99:0,120,3546	0/0:34,0:34:99:0,102,3029	0/0:32,0:32:96.32:0,96,2827	0/0:15,0:15:42.14:0,42,1272	1/1:2,14:16:48.16:1675,48,0	1/1:3,15:18:51.18:1856,51,0	0/0:27,0:27:81.28:0,81,2354	0/0:21,0:21:63.22:0,63,1908	0/0:25,0:25:75.26:0,75,2153	0/0:35,0:35:99:0,105,3022	0/0:28,0:28:78.27:0,78,2282	0/0:24,0:24:69.24:0,69,2001	0/0:16,0:16:48.16:0,48,1387	0/0:50,0:50:99:0,151,4484	1/1:0,8:8:24.08:903,24,0	1/1:1,12:13:36.12:1380,36,0	1/1:1,9:10:20.72:775,21,0	0/0:27,0:27:75.22:0,75,2124	0/0:25,0:25:72.20:0,72,2101	0/0:23,0:23:66.23:0,66,1926	0/0:13,0:13:39.13:0,39,1181
chr10	72871976	.	C	CCA	707.31	PASS	AB=0.934;AC=18;AF=0.360;AN=50;BaseQRankSum=1.850;DP=487;FS=2.761;HRun=0;HaplotypeScore=123.6891;InbreedingCoeff=0.1470;MQ=62.09;MQ0=8;MQRankSum=-2.050;QD=2.85;ReadPosRankSum=0.703;VQSLOD=2.4038;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:26:8.43:53,8,0	0/0:4,0:3:3.01:0,3,32	./.	./.	0/1:12,0:12:11.91:12,0,55	0/1:13,0:13:36.17:36,0,69	0/0:15,0:20:14.67:0,15,71	1/1:21,0:21:2.84:14,3,0	0/0:21,0:21:15.04:0,15,159	0/0:22,0:22:5.02:0,5,20	0/0:7,0:14:2.84:0,3,14	0/1:20,1:21:20.15:67,0,20	1/1:12,2:15:23.72:235,24,0	0/0:12,0:14:14.86:0,15,134	0/1:24,1:27:14.44:14,0,178	0/0:17,0:22:27.33:0,27,209	0/0:10,0:13:2.84:0,3,14	0/1:17,4:20:24.28:258,0,24	0/1:15,0:15:18.91:74,0,19	0/0:7,0:7:5.91:0,6,48	0/0:20,0:21:11.82:0,12,98	1/1:16,0:16:2.99:24,3,0	1/1:20,2:22:5.87:39,6,0	0/1:22,3:23:0.05:0,0,0	./.	0/0:19,0:17:6.94:0,7,91	0/1:10,1:12:32.68:33,0,84	0/0:11,0:10:17.87:0,18,167
chr10	72872033	.	TGC	T	2049.88	PASS	AB=0.968;AC=13;AF=0.232;AN=56;BaseQRankSum=8.301;DP=577;FS=14.471;HRun=0;HaplotypeScore=110.8193;InbreedingCoeff=0.8582;MQ=60.31;MQ0=15;MQRankSum=-0.982;QD=11.39;ReadPosRankSum=-2.797;VQSLOD=2.1148;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,21:25:18.05:252,18,0	0/0:5,0:5:12.04:0,12,214	0/0:37,0:13:34.95:0,35,502	0/1:29,1:11:10.05:10,0,351	0/0:9,0:9:18.04:0,18,292	0/0:16,0:16:15.29:0,15,591	0/0:19,0:19:48.06:0,48,784	0/0:27,0:27:78.17:0,78,1230	0/0:23,0:23:65.87:0,66,1101	0/0:17,0:17:35.27:0,35,611	0/0:16,0:16:32.90:0,33,587	1/1:9,20:29:27.09:377,27,0	1/1:6,18:24:45.15:629,45,0	0/0:20,0:20:48.15:0,48,825	0/0:22,0:22:53.49:0,53,1016	0/0:20,0:20:34.83:0,35,641	0/0:21,0:21:54.17:0,54,932	0/0:17,0:17:49.42:0,49,741	0/0:16,0:16:34.70:0,35,723	0/0:9,0:9:25.62:0,26,406	0/0:49,0:49:99:0,105,2136	1/1:5,14:19:21.07:294,21,0	1/1:10,7:17:3.01:42,3,0	1/1:12,23:33:45.13:628,45,0	0/0:12,0:12:24.08:0,24,424	0/0:22,0:21:42.69:0,43,843	0/0:8,0:8:20.38:0,20,297	0/0:12,0:12:32.32:0,32,547
chr10	72872883	.	GCTCTATCTCTCTCTCTCT	G	2817.39	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=2.557;DP=655;FS=5.242;HRun=0;HaplotypeScore=235.2789;InbreedingCoeff=0.9088;MQ=72.42;MQ0=33;MQRankSum=-2.479;QD=14.91;ReadPosRankSum=3.996;VQSLOD=2.2342;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:43,0:43:99:868,108,0	0/0:12,0:12:29.24:0,29,381	0/0:73,0:26:49.09:0,49,467	0/0:110,0:43:78.14:0,78,755	0/0:15,0:14:9.87:0,10,184	0/0:7,0:7:20.98:0,21,305	0/0:29,0:29:70.96:0,71,902	0/0:36,0:36:75.85:0,76,616	0/0:8,0:8:6.95:0,7,90	1/1:12,4:16:34.28:300,34,0	1/1:7,0:7:17.98:149,18,0	1/1:10,0:10:20.76:147,21,0	1/1:18,0:18:35.60:262,36,0	0/0:16,0:16:40.08:0,40,319	0/0:11,0:11:32.84:0,33,255	0/0:17,0:17:41.60:0,42,424	0/1:22,0:22:4.98:414,0,5	1/1:18,0:18:45.21:341,45,0	0/0:22,0:20:47.84:0,48,579	0/0:13,0:13:30.36:0,30,234	0/0:37,0:36:50.48:0,50,386	1/1:8,0:8:8.99:75,9,0	1/1:17,0:17:25.95:158,26,0	1/1:14,0:14:14.84:108,15,0	1/1:16,0:16:26.84:213,27,0	0/0:13,0:12:32.03:0,32,452	0/0:20,0:20:40.64:0,41,369	0/0:27,0:26:70.83:0,71,1073
chr10	72872886	.	CTA	C	2937.51	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=3.044;DP=649;FS=0.000;HRun=0;HaplotypeScore=75.4740;InbreedingCoeff=0.8644;MQ=70.09;MQ0=41;MQRankSum=-3.305;QD=14.47;ReadPosRankSum=1.943;VQSLOD=3.1713;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:44,0:43:99:868,108,0	0/0:12,0:12:16.23:0,16,175	0/0:71,0:24:49.59:0,50,469	0/0:109,0:42:77.37:0,77,751	0/0:14,0:13:9.87:0,10,184	0/0:9,0:9:2.01:0,2,128	0/0:29,0:29:70.89:0,71,581	0/0:32,0:32:65.66:0,66,614	0/0:7,0:7:6.95:0,7,90	1/1:16,0:16:38.96:322,39,0	1/1:8,0:7:17.98:149,18,0	1/1:10,0:10:20.76:147,21,0	1/1:17,0:17:35.60:262,36,0	0/0:17,0:17:20.40:0,20,262	0/0:11,0:11:32.84:0,33,255	0/0:18,0:18:23.20:0,23,276	1/1:22,0:22:62.77:496,63,0	1/1:18,0:18:44.74:340,45,0	0/0:21,0:17:44.14:0,44,363	0/0:12,0:12:29.89:0,30,233	0/0:35,0:32:50.48:0,50,385	1/1:3,5:8:8.99:75,9,0	1/1:16,0:16:25.95:158,26,0	1/1:14,0:14:14.57:107,15,0	1/1:15,0:15:26.84:213,27,0	0/1:15,0:14:18.79:19,0,181	0/0:19,0:19:40.84:0,41,369	0/0:30,0:27:28.78:0,29,399
chr10	72872995	.	C	CT	5815.16	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.461;DP=562;FS=7.555;HRun=0;HaplotypeScore=86.3369;InbreedingCoeff=0.9988;MQ=101.25;MQ0=0;MQRankSum=-9.757;QD=40.95;ReadPosRankSum=1.980;VQSLOD=5.3314;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:81.28:1294,81,0	0/0:10,0:10:30.09:0,30,401	0/0:31,0:31:93.24:0,93,1235	0/0:37,0:37:99:0,102,1423	0/0:19,0:19:57.18:0,57,770	0/0:19,0:19:56.53:0,57,729	0/0:24,0:24:72.24:0,72,1002	0/0:23,0:23:69.22:0,69,949	0/0:14,0:14:42.14:0,42,586	0/0:10,0:10:30.06:0,30,383	0/0:22,0:22:66.21:0,66,903	1/1:1,17:18:51.16:767,51,0	1/1:0,18:18:54.18:831,54,0	0/0:19,0:19:54.17:0,54,737	0/0:19,0:19:54.18:0,54,754	0/0:12,0:12:36.10:0,36,471	0/0:29,0:29:84.28:0,84,1174	0/0:25,0:25:69.22:0,69,944	0/0:13,0:13:39.10:0,39,511	0/0:10,0:10:30.09:0,30,402	0/0:27,0:27:75.25:0,75,1045	1/1:1,29:30:87.28:1279,87,0	1/1:2,19:21:54.17:788,54,0	1/1:0,20:20:57.19:855,57,0	0/0:18,0:18:54.18:0,54,750	0/0:15,0:15:45.11:0,45,605	0/0:7,0:7:21.07:0,21,292	0/0:17,0:17:51.17:0,51,712
chr10	72872999	.	ACT	A	4002.04	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.249;DP=562;FS=0.896;HRun=0;HaplotypeScore=103.6087;InbreedingCoeff=0.9987;MQ=100.04;MQ0=0;MQRankSum=-6.030;QD=37.06;ReadPosRankSum=2.751;VQSLOD=5.4441;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:78.27:0,78,1501	0/0:10,0:10:30.08:0,30,523	0/0:27,0:27:81.28:0,81,1546	0/0:39,0:39:99:0,105,1942	0/0:18,0:18:54.17:0,54,1009	0/0:18,0:18:51.17:0,51,984	0/0:25,0:25:72.25:0,72,1380	0/0:26,0:26:78.26:0,78,1472	0/0:14,0:14:42.14:0,42,811	0/0:10,0:10:30.10:0,30,580	0/0:21,0:21:63.20:0,63,1184	1/1:1,17:18:51.17:759,51,0	1/1:1,17:18:48.16:706,48,0	0/0:19,0:19:51.17:0,51,975	0/0:18,0:18:51.17:0,51,977	0/0:12,0:12:36.12:0,36,695	0/0:30,0:30:87.30:0,87,1670	0/0:27,0:27:75.26:0,75,1447	0/0:14,0:14:39.09:0,39,716	0/0:12,0:12:33.11:0,33,630	0/0:25,0:25:69.24:0,69,1332	1/1:3,27:30:72.19:1036,72,0	1/1:2,20:22:54.12:758,54,0	1/1:1,19:20:51.17:744,51,0	0/0:19,0:19:51.17:0,51,985	0/0:15,0:15:45.15:0,45,870	0/0:7,0:7:21.07:0,21,401	0/0:17,0:17:51.17:0,51,985
chr10	72873142	.	A	AGTGTGTGTGT	1915.02	PASS	AB=0.967;AC=15;AF=0.288;AN=52;BaseQRankSum=2.665;DP=565;FS=13.351;HRun=0;HaplotypeScore=190.8685;InbreedingCoeff=0.3387;MQ=63.63;MQ0=14;MQRankSum=-5.330;QD=7.25;ReadPosRankSum=-1.900;VQSLOD=1.5899;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:41:5.20:20,5,0	0/0:11,0:11:9.03:0,9,196	./.	./.	0/0:16,0:16:18.06:0,18,446	0/0:18,0:18:21.06:0,21,535	0/0:20,0:21:24.55:0,25,592	0/1:29,0:29:5.25:5,0,135	0/0:12,0:12:15.46:0,15,238	1/1:13,5:18:27.09:857,27,0	0/1:12,2:16:0:0,0,0	0/1:14,0:14:14.05:14,0,146	0/1:10,0:10:0:0,0,0	0/0:17,0:16:14.96:0,15,304	0/0:14,0:14:5.44:0,5,167	0/0:15,0:15:15.04:0,15,377	1/1:27,9:36:25.01:683,25,0	0/1:29,0:29:2.23:388,0,2	0/1:11,0:11:19.83:20,0,118	0/0:11,0:11:6.02:0,6,176	0/0:61,0:61:78.19:0,78,1866	0/0:16,0:14:5.89:0,6,85	0/0:21,0:21:2.19:0,2,5	0/1:21,0:21:0:0,0,0	0/1:14,1:14:0:0,0,0	0/1:23,0:20:67.42:67,0,405	0/0:6,0:6:3:0,3,26	0/0:9,0:8:12:0,12,284
chr10	72873172	.	TGTGTGTGTGTGCGCGCGCGCGCGCGCGCGCAC	T	1752	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=5.374;DP=520;FS=11.231;HRun=0;HaplotypeScore=324.5039;InbreedingCoeff=0.7334;MQ=49.86;MQ0=13;MQRankSum=-5.045;QD=33.06;ReadPosRankSum=2.074;VQSLOD=0.9043;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:5.94:0,6,158	0/0:11,0:11:24.08:0,24,1889	./.	0/0:9,0:6:12.04:0,12,261	0/0:16,0:16:26.98:0,27,2476	0/0:17,0:17:42.62:0,43,4602	0/0:29,0:28:72.25:0,72,5629	0/0:26,0:26:68.44:0,68,2838	0/0:17,0:17:39.13:0,39,3608	0/0:14,0:13:37.94:0,38,1989	0/0:13,0:13:5.90:0,6,378	1/1:3,9:12:12.04:880,12,0	1/1:2,5:7:3.01:251,3,0	0/0:20,0:19:48.16:0,48,4501	0/0:10,0:10:18.53:0,19,1484	0/0:9,0:9:21.07:0,21,1829	0/0:35,0:35:42.64:0,43,2622	0/0:32,0:31:87.74:0,88,7096	0/0:15,0:15:41.70:0,42,2297	0/0:11,0:11:24.08:0,24,2497	0/0:57,0:57:99:0,126,12534	1/1:8,13:18:6.02:505,6,0	1/1:6,7:13:3.48:245,3,0	0/0:18,0:18:2.09:0,2,67	0/0:19,0:18:20.89:0,21,1907	0/0:24,0:21:57.20:0,57,4336	0/0:6,0:5:15.05:0,15,1033	0/0:18,0:17:48.14:0,48,3859
chr10	72873182	.	TGCGCGCGCGCGCGCGCGCGCAC	T	1078.70	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=4.847;DP=473;FS=0.985;HRun=0;HaplotypeScore=211.8400;InbreedingCoeff=0.7601;MQ=55.84;MQ0=11;MQRankSum=-3.748;QD=13.32;ReadPosRankSum=0.615;VQSLOD=2.4258;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,20:34:2.31:52,2,0	0/0:10,0:10:24.07:0,24,1476	0/0:6,0:4:6.49:0,6,128	./.	0/0:15,0:15:27.05:0,27,1535	0/0:17,0:17:42.57:0,43,3135	0/0:31,0:30:80.30:0,80,6278	0/0:22,0:22:56.08:0,56,2366	0/0:15,0:15:36.07:0,36,2683	0/0:11,0:10:23.71:0,24,1329	0/0:12,0:12:9.03:0,9,884	1/1:9,0:9:12.04:522,12,0	1/1:5,0:5:3.01:162,3,0	0/0:20,0:19:48.08:0,48,3548	0/0:8,0:8:15.52:0,16,1083	0/0:8,0:8:21.05:0,21,1408	0/0:34,0:34:39.75:0,40,2425	0/0:29,0:30:48.76:0,49,5226	0/0:15,0:15:16.46:0,16,1890	0/0:10,0:10:18.88:0,19,1669	0/0:53,0:53:99:0,120,8240	1/1:15,0:13:6.02:326,6,0	1/1:7,0:7:3.48:154,3,0	1/1:0,11:11:0.47:1,0,0	0/0:21,0:20:26.97:0,27,2529	0/0:19,0:18:53.77:0,54,3062	0/0:10,0:9:24.07:0,24,1795	0/0:15,0:14:42.10:0,42,3020
chr10	72873185	.	GCGCGCGCGCGCGCGCGCA	G	836.43	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=4.897;DP=446;FS=0.000;HRun=0;HaplotypeScore=178.4907;InbreedingCoeff=0.7603;MQ=57.22;MQ0=10;MQRankSum=-4.751;QD=11.15;ReadPosRankSum=1.101;VQSLOD=2.6525;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,4:28:2.85:99,3,0	0/0:10,0:10:21.03:0,21,1159	0/0:6,0:4:4.85:0,5,115	./.	0/0:19,0:19:36.11:0,36,2057	0/0:16,0:16:39.61:0,40,2611	0/0:34,0:33:87.28:0,87,5776	0/0:19,0:19:44.64:0,45,1873	0/0:14,0:14:30.10:0,30,2155	0/0:10,0:9:20.88:0,21,1103	0/0:11,0:11:15.05:0,15,1186	1/1:9,0:9:9.92:380,10,0	1/1:5,0:5:3.01:125,3,0	0/0:18,0:17:45.15:0,45,3099	0/0:8,0:8:15.02:0,15,818	0/0:6,0:6:18.06:0,18,1083	0/0:28,0:28:43.73:0,44,2215	0/0:29,0:28:74.19:0,74,4529	0/0:15,0:15:36.29:0,36,1682	0/0:10,0:10:18.16:0,18,1370	0/0:50,0:50:99:0,117,6751	1/1:15,0:13:6.02:252,6,0	1/1:7,0:7:3.48:117,3,0	1/1:11,0:11:0.47:1,0,0	0/0:18,0:17:27.09:0,27,2075	0/0:21,0:18:50.90:0,51,2654	0/0:9,0:8:24.08:0,24,1675	0/0:14,0:13:39.13:0,39,2400
chr10	72873377	.	GGACGGCCAAT	G	3997.52	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.098;DP=631;FS=1.257;HRun=0;HaplotypeScore=184.2002;InbreedingCoeff=0.9967;MQ=87.44;MQ0=1;MQRankSum=-9.539;QD=54.02;ReadPosRankSum=2.008;VQSLOD=3.2415;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,141,7186	0/0:11,0:11:30.09:0,30,1348	0/0:21,0:21:59.55:0,60,2154	0/0:25,0:25:45.74:0,46,2965	0/0:16,0:16:45.15:0,45,2279	0/0:22,0:21:57.20:0,57,2961	0/0:25,0:25:72.25:0,72,3563	0/0:37,0:37:99:0,105,5149	0/0:32,0:32:96.33:0,96,4748	0/0:24,0:24:69.21:0,69,3249	0/0:18,0:18:54.19:0,54,2771	1/1:4,13:17:27.09:897,27,0	1/1:1,10:11:21.07:700,21,0	0/0:37,0:37:99:0,111,5690	0/0:30,0:30:87.30:0,87,4539	0/0:25,0:25:75.26:0,75,3964	0/0:27,0:27:78.27:0,78,3861	0/0:20,0:20:54.17:0,54,2621	0/0:16,0:16:45.15:0,45,2193	0/0:14,0:14:36.12:0,36,1802	0/0:40,0:40:99:0,120,5875	1/1:1,11:12:24.08:800,24,0	1/1:1,9:10:24.08:800,24,0	1/1:2,22:24:24.08:801,24,0	0/0:13,0:13:36.12:0,36,1856	0/0:20,0:20:57.20:0,57,3034	0/0:26,0:25:75.26:0,75,3662	0/0:8,0:8:24.08:0,24,1079
chr10	72873998	.	G	GA	254.72	PASS	AB=0.750;AC=11;AF=0.196;AN=56;BaseQRankSum=0.858;DP=194;FS=1.056;HRun=1;HaplotypeScore=32.0639;InbreedingCoeff=0.5410;MQ=70.90;MQ0=0;MQRankSum=0.414;QD=7.72;ReadPosRankSum=-0.401;VQSLOD=0.4675;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:9.21:0,9,94	0/0:4,0:4:11.97:0,12,105	0/0:11,0:9:8.90:0,9,142	0/0:7,0:6:2.20:0,2,43	0/0:7,0:7:8.95:0,9,83	0/0:10,0:10:23.01:0,23,175	0/0:12,0:12:35.67:0,36,314	0/0:7,0:6:14.97:0,15,129	0/0:14,0:14:32.81:0,33,275	1/1:0,1:2:3.01:39,3,0	1/1:2,0:2:6.01:61,6,0	0/0:13,0:13:35.08:0,35,308	0/0:7,0:7:14.91:0,15,112	0/0:6,0:6:11.35:0,11,80	0/0:8,0:9:21:0,21,222	0/0:4,0:4:8.99:0,9,84	1/1:2,12:14:6.01:77,6,0	1/1:2,5:7:3.77:107,4,0	0/0:10,0:10:11.77:0,12,102	0/0:3,0:3:8.94:0,9,67	0/0:14,0:14:23.95:0,24,207	0/0:2,0:2:2.90:0,3,16	0/0:3,0:3:5.96:0,6,45	0/0:2,0:3:8.92:0,9,67	1/1:3,2:5:9.88:85,10,0	0/1:2,1:3:30.25:30,0,55	0/0:6,0:6:11.97:0,12,96	0/0:2,0:2:2.99:0,3,23
chr10	72874821	.	TCTACTTTG	T	10537.21	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=16.682;DP=793;FS=0.000;HRun=0;HaplotypeScore=209.8657;InbreedingCoeff=0.9999;MQ=70.95;MQ0=0;MQRankSum=-17.597;QD=65.86;ReadPosRankSum=0.704;VQSLOD=4.6475;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,35:41:96.29:2573,96,0	0/0:12,0:12:36.12:0,36,1543	0/0:35,0:35:98.66:0,99,3904	0/0:30,0:30:87.30:0,87,3279	0/0:32,0:32:96.33:0,96,4153	0/0:19,0:19:57.20:0,57,2549	0/0:38,0:38:99:0,111,4719	0/0:30,0:30:81.27:0,81,3211	0/0:37,0:37:99:0,105,4431	0/0:37,0:37:99:0,111,4745	0/0:22,0:22:63.22:0,63,2774	1/1:2,21:23:63.22:1771,63,0	1/1:4,28:32:78.27:2231,78,0	0/0:22,0:22:66.23:0,66,2931	0/0:37,0:37:99:0,111,4525	0/0:32,0:32:90.31:0,90,3845	0/0:36,0:36:99:0,108,4548	0/0:20,0:20:57.16:0,57,2401	0/0:25,0:25:66.23:0,66,2800	0/0:25,0:25:75.26:0,75,3268	0/0:51,0:51:99:0,147,6259	1/1:1,28:29:75.21:2084,75,0	1/1:2,14:16:35.88:864,36,0	1/1:2,17:19:34.47:1014,34,0	0/0:13,0:13:36.12:0,36,1609	0/0:25,0:25:75.25:0,75,2998	0/0:39,0:39:99:0,114,4893	0/0:16,0:16:48.16:0,48,2129
chr10	72876187	.	GTCT	G	3221.02	PASS	AB=0.929;AC=11;AF=0.196;AN=56;BaseQRankSum=4.880;DP=646;FS=4.149;HRun=0;HaplotypeScore=119.1094;InbreedingCoeff=0.8978;MQ=89.54;MQ0=0;MQRankSum=-3.457;QD=34.27;ReadPosRankSum=1.196;VQSLOD=4.4605;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:90.27:0,90,1916	0/0:8,0:8:21.04:0,21,415	0/0:25,0:25:60.21:0,60,1289	0/0:27,0:27:66.23:0,66,1369	0/0:20,0:20:54.17:0,54,1133	0/0:16,0:16:45.15:0,45,976	0/0:39,0:39:99:0,114,2429	0/0:29,0:29:81.28:0,81,1759	0/1:12,1:13:8.44:8,0,748	1/1:2,23:25:69.21:1065,69,0	1/1:1,11:12:30.10:474,30,0	0/0:21,0:21:60.21:0,60,1300	0/0:20,0:20:54.19:0,54,1173	0/0:21,0:21:57.20:0,57,1238	0/0:35,0:35:96.33:0,96,2083	0/0:21,0:21:63.22:0,63,1376	1/1:0,16:16:42.12:666,42,0	1/1:1,8:9:24.08:380,24,0	0/0:24,0:24:66.22:0,66,1392	0/0:10,0:10:30.10:0,30,656	0/0:67,0:67:99:0,184,3897	0/0:21,0:21:57.20:0,57,1240	0/0:18,0:18:48.16:0,48,1022	0/0:35,0:35:99:0,99,2128	1/1:0,19:19:51.17:806,51,0	0/0:27,1:28:36.70:0,37,1708	0/0:23,0:20:57.20:0,57,1237	0/0:8,0:8:21.07:0,21,459
chr10	72876229	.	A	AG	6239.34	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.560;DP=605;FS=1.151;HRun=0;HaplotypeScore=77.5352;InbreedingCoeff=0.9966;MQ=89.81;MQ0=0;MQRankSum=-3.055;QD=45.54;ReadPosRankSum=1.998;VQSLOD=4.9368;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:81.28:1283,81,0	0/0:7,0:7:18.05:0,18,235	0/0:20,0:20:54.14:0,54,717	0/0:29,0:29:73.86:0,74,1100	0/0:18,0:18:54.18:0,54,752	0/0:15,0:15:45.15:0,45,629	0/0:30,0:30:87.28:0,87,1196	0/0:27,0:27:75.24:0,75,1031	0/0:17,0:17:51.15:0,51,679	0/0:26,0:26:78.24:0,78,1056	0/0:15,0:15:45.14:0,45,611	1/1:0,24:24:72.25:1150,72,0	1/1:0,12:12:36.12:575,36,0	0/0:23,0:23:69.21:0,69,946	0/0:27,0:27:78.26:0,78,1091	0/0:27,0:27:78.25:0,78,1074	0/0:22,0:22:66.22:0,66,915	0/0:13,0:13:39.13:0,39,545	0/0:26,0:26:78.19:0,78,1047	0/0:11,0:11:33.11:0,33,462	0/0:47,0:47:99:0,141,1965	1/1:0,20:20:60.20:959,60,0	1/1:1,15:16:42.14:671,42,0	1/1:0,35:35:99:1602,102,0	0/0:14,0:14:42.12:0,42,568	0/0:31,0:31:93.29:0,93,1269	0/0:17,0:15:51.16:0,51,691	0/0:6,0:6:18.06:0,18,252
chr10	72878837	.	GTC	G	2508.23	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.739;DP=558;FS=2.228;HRun=0;HaplotypeScore=75.3517;InbreedingCoeff=0.9696;MQ=86.48;MQ0=1;MQRankSum=-3.186;QD=28.83;ReadPosRankSum=3.008;VQSLOD=5.2661;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1920	0/0:6,0:6:18.06:0,18,364	0/0:16,0:16:42.04:0,42,541	0/0:21,0:21:53.86:0,54,894	0/0:9,0:9:27.08:0,27,498	0/0:19,0:19:51.15:0,51,995	0/0:30,0:30:90.25:0,90,1745	0/0:31,0:31:84.25:0,84,1554	0/0:15,0:15:45.14:0,45,863	1/1:2,23:25:69.23:933,69,0	1/1:0,2:2:6.02:81,6,0	0/0:30,0:30:90.31:0,90,1809	0/0:16,0:16:48.15:0,48,936	0/0:25,0:25:72.23:0,72,1404	0/0:16,0:16:48.15:0,48,938	0/0:20,0:20:60.18:0,60,1141	1/1:0,18:18:42.14:568,42,0	1/1:4,25:29:60.20:812,60,0	0/0:16,0:16:45.11:0,45,737	0/0:8,0:8:24.06:0,24,415	0/0:56,0:55:99:0,150,2942	0/0:12,0:12:30.10:0,30,578	0/0:7,0:7:21.04:0,21,348	0/0:47,0:47:99:0,141,2797	1/1:5,8:13:21.07:284,21,0	0/0:19,0:19:57.19:0,57,1112	0/0:11,0:11:32.95:0,33,582	0/0:7,0:7:21.07:0,21,402
chr10	72880486	.	A	ACACCCTC	1339.37	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.545;DP=625;FS=6.813;HRun=0;HaplotypeScore=145.9524;InbreedingCoeff=0.9320;MQ=70.16;MQ0=0;MQRankSum=-6.183;QD=35.25;ReadPosRankSum=-1.472;VQSLOD=2.5195;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:25:27.09:853,27,0	0/0:15,0:15:31.30:0,31,670	0/0:26,0:25:45.19:0,45,1152	0/0:29,0:26:51.16:0,51,998	0/0:15,0:15:30.10:0,30,646	0/0:16,0:16:42.14:0,42,958	0/0:33,0:33:79.13:0,79,1828	0/0:18,0:18:30.10:0,30,675	0/0:20,0:20:54.17:0,54,1233	0/0:21,0:21:54.19:0,54,1228	0/0:9,0:9:15.05:0,15,364	0/0:28,0:28:69.24:0,69,1556	0/0:23,0:23:63.22:0,63,1454	0/0:25,0:25:54.19:0,54,1231	0/0:27,0:27:69.22:0,69,1564	0/0:19,0:19:51.16:0,51,1165	0/0:31,0:31:78.24:0,78,1746	1/1:9,3:13:18.06:606,18,0	0/0:22,0:22:42.14:0,42,904	0/0:19,0:19:45.15:0,45,1047	0/0:54,0:54:99:0,147,3427	0/0:26,0:26:59.88:0,60,1307	0/0:9,0:9:6.02:0,6,146	0/0:37,0:36:90.29:0,90,2058	0/0:26,0:26:66.23:0,66,1573	0/0:18,0:18:45.15:0,45,1019	0/0:15,0:15:42.14:0,42,1012	0/0:6,0:6:18.06:0,18,412
chr10	72881006	.	TCCC	T	4090.75	PASS	AB=0.601;AC=14;AF=0.250;AN=56;BaseQRankSum=-1.415;DP=436;FS=21.462;HRun=12;HaplotypeScore=77.8766;InbreedingCoeff=0.7193;MQ=74.05;MQ0=0;MQRankSum=-1.175;QD=23.24;ReadPosRankSum=7.221;VQSLOD=0.3100;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,29:42:83.16:1016,83,0	0/0:2,0:2:5.93:0,6,62	0/0:9,0:9:2.65:0,3,118	0/0:13,0:11:23.68:0,24,256	0/0:9,0:9:9:0,9,107	0/0:1,0:10:20.42:0,20,144	0/0:18,0:21:30.02:0,30,417	0/0:15,0:16:11.96:0,12,110	0/0:16,0:18:33.01:0,33,431	0/1:7,1:13:21.90:22,0,101	0/0:9,0:9:10.19:0,10,71	1/1:4,24:28:66.16:834,66,0	1/1:2,17:19:48.11:586,48,0	0/0:14,0:15:24.03:0,24,326	0/0:10,0:12:27.06:0,27,417	0/0:6,0:8:12.02:0,12,200	0/0:9,0:26:49.08:0,49,374	0/1:1,1:14:12.77:21,0,13	0/0:9,0:11:23.64:0,24,360	0/0:8,0:8:9.02:0,9,122	0/0:21,0:24:39.01:0,39,496	1/1:1,23:24:60.10:722,60,0	1/1:2,12:15:29.97:359,30,0	1/1:3,18:21:42.11:531,42,0	0/0:8,0:15:20.12:0,20,134	0/0:11,0:13:8.99:0,9,105	0/0:10,0:11:24.04:0,24,373	0/0:10,0:10:14.33:0,14,224
chr10	72882729	.	T	TG	4358.76	PASS	AB=0.622;AC=22;AF=0.393;AN=56;BaseQRankSum=-8.389;DP=562;FS=18.074;HRun=9;HaplotypeScore=65.2031;InbreedingCoeff=0.8518;MQ=71.41;MQ0=0;MQRankSum=-0.936;QD=20.18;ReadPosRankSum=0.868;VQSLOD=3.6619;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:45:74.29:0,74,236	0/0:10,0:10:29.96:0,30,254	0/0:14,0:16:19.82:0,20,236	0/0:16,0:15:31.93:0,32,247	0/0:15,1:16:8.82:0,9,305	0/0:18,0:18:41.97:0,42,360	0/0:18,0:18:47.98:0,48,417	0/0:39,0:39:64.66:0,65,565	0/0:22,0:22:56.96:0,57,491	0/0:20,0:20:47.98:0,48,417	0/0:21,0:21:56.89:0,57,485	1/1:1,14:15:36.10:398,36,0	1/1:3,15:18:30.08:332,30,0	0/0:13,0:13:35.98:0,36,309	0/0:17,0:17:41.96:0,42,361	0/0:17,0:17:44.98:0,45,391	0/0:39,0:39:99:0,105,911	1/1:1,11:12:33.09:365,33,0	0/1:8,11:19:7.25:364,0,7	0/1:9,16:25:7.07:360,0,7	1/1:3,19:22:39.11:431,39,0	1/1:6,12:18:7.64:270,8,0	1/1:4,9:13:24.06:265,24,0	1/1:3,18:21:16.06:405,16,0	0/0:19,0:19:50.96:0,51,438	1/1:5,19:24:31.10:571,31,0	1/1:3,12:15:24.06:265,24,0	1/1:1,12:13:30.08:332,30,0
chr10	72882900	.	T	TCAGA	4149.05	PASS	AB=0.822;AC=12;AF=0.214;AN=56;BaseQRankSum=-5.826;DP=767;FS=0.000;HRun=0;HaplotypeScore=144.3801;InbreedingCoeff=0.6256;MQ=72.61;MQ0=2;MQRankSum=0.685;QD=17.66;ReadPosRankSum=-2.285;VQSLOD=2.4757;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:48,0:50:31.03:465,31,0	0/0:16,0:16:30.10:0,30,465	0/0:30,0:26:3.01:0,3,35	0/0:23,0:19:3.01:0,3,44	0/0:24,0:24:42.10:0,42,606	0/0:24,0:25:42.12:0,42,611	0/0:35,0:35:33.11:0,33,501	0/0:40,0:40:6.02:0,6,92	0/0:21,0:21:36.12:0,36,557	0/0:20,0:33:38.34:0,38,290	0/0:7,0:15:18.02:0,18,168	1/1:12,16:30:30.03:706,30,0	1/1:21,13:34:1.56:982,2,0	0/0:24,0:24:57.18:0,57,863	0/0:33,0:33:63.17:0,63,913	0/0:19,0:20:45.13:0,45,655	0/1:10,0:32:13.52:14,0,420	0/0:5,0:15:3:0,3,28	0/0:19,0:19:15.05:0,15,233	0/0:26,0:26:48.16:0,48,745	0/0:44,0:44:72.23:0,72,1093	1/1:12,16:28:27.09:636,27,0	1/1:13,9:22:12.04:283,12,0	0/1:17,20:38:39.01:1065,0,39	0/0:10,0:25:23.97:0,24,224	0/0:24,0:24:36.10:0,36,534	0/0:23,0:23:39.13:0,39,603	0/0:16,0:16:30.10:0,30,466
chr10	72883633	.	TGTGA	T	666.89	PASS	AB=1.000;AC=24;AF=0.480;AN=50;BaseQRankSum=1.438;DP=274;FS=1.276;HRun=0;HaplotypeScore=49.1629;InbreedingCoeff=-0.0072;MQ=36.18;MQ0=63;MQRankSum=1.729;QD=3.60;ReadPosRankSum=1.484;VQSLOD=0.7180;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,0:1:2.99:24,3,0	./.	./.	1/1:11,0:7:8.94:66,9,0	0/0:6,0:5:3.41:0,3,20	0/0:17,0:11:9.88:0,10,79	0/1:9,0:6:0:0,0,0	0/1:11,0:8:8.39:8,0,19	1/1:9,0:6:5.91:48,6,0	0/0:6,0:5:2.99:0,3,24	0/0:6,0:4:0.47:0,0,1	0/1:10,0:8:19.43:45,0,19	1/1:10,0:8:17.91:140,18,0	0/0:7,0:6:0.47:0,0,1	1/1:9,0:6:8.78:73,9,0	0/1:23,0:21:49.71:50,0,103	0/1:7,0:5:14.67:15,0,17	1/1:5,0:4:2.96:26,3,0	0/0:2,0:1:0:0,0,0	1/1:30,0:19:3.62:98,4,0	0/1:15,0:13:30.10:31,0,30	0/0:3,5:6:0:0,0,0	0/0:22,0:17:1.67:0,2,86	0/1:5,0:3:15.35:15,0,19	0/1:16,0:11:0.54:71,0,1	0/1:9,0:8:35.44:70,0,35	0/1:5,0:2:9.07:17,0,9
chr10	72883635	.	TGA	T	636.22	PASS	AB=0.966;AC=24;AF=0.500;AN=48;BaseQRankSum=1.751;DP=281;FS=2.760;HRun=0;HaplotypeScore=48.3896;InbreedingCoeff=0.1047;MQ=37.36;MQ0=60;MQRankSum=0.403;QD=3.59;ReadPosRankSum=2.241;VQSLOD=1.6627;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,0:1:2.99:24,3,0	./.	./.	1/1:11,0:7:8.94:66,9,0	0/0:8,0:7:6.41:0,6,45	0/0:15,0:10:9.47:0,9,78	./.	0/1:10,0:7:18.99:28,0,19	1/1:9,0:6:5.94:48,6,0	0/0:7,0:6:5.95:0,6,43	0/0:7,0:5:3.47:0,3,27	0/1:11,0:9:14.15:14,0,19	1/1:11,0:9:20.86:159,21,0	1/1:8,0:7:2.75:23,3,0	1/1:9,0:6:8.98:73,9,0	0/1:23,0:21:34.10:34,0,105	0/0:9,0:6:5.99:0,6,48	1/1:5,0:4:2.96:26,3,0	0/0:3,0:2:0:0,0,0	1/1:28,0:18:14.59:112,15,0	0/1:16,0:14:27.76:28,0,51	0/0:8,0:6:0:0,0,0	0/0:24,0:19:7.71:0,8,133	0/1:5,0:3:15.35:15,0,19	0/1:10,6:11:0.54:71,0,1	0/1:9,0:8:35.34:43,0,35	0/1:5,0:2:12.97:17,0,13
chr10	72884692	.	CTT	C	1318.41	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.579;DP=584;FS=9.540;HRun=4;HaplotypeScore=69.0307;InbreedingCoeff=0.9947;MQ=85.88;MQ0=0;MQRankSum=-4.035;QD=38.78;ReadPosRankSum=0.780;VQSLOD=2.3888;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:34:96.32:1413,96,0	0/0:8,0:8:24.08:0,24,449	0/0:22,0:22:51.28:0,51,1061	0/0:16,0:16:32.95:0,33,651	0/0:16,0:16:48.15:0,48,855	0/0:19,0:19:57.19:0,57,1039	0/0:27,0:27:81.28:0,81,1514	0/0:32,0:32:84.29:0,84,1574	0/0:22,0:22:66.23:0,66,1227	0/0:12,0:12:36.10:0,36,632	0/0:17,0:17:51.17:0,51,952	0/0:25,0:25:72.25:0,72,1349	0/0:19,0:19:57.20:0,57,1068	0/0:16,0:16:48.16:0,48,899	0/0:34,0:34:99:0,99,1850	0/0:17,0:17:51.17:0,51,956	0/0:35,0:35:99:0,105,1948	0/0:23,0:23:69.20:0,69,1257	0/0:19,0:19:54.19:0,54,999	0/0:19,0:19:54.19:0,54,1007	0/0:32,0:32:96.33:0,96,1799	0/0:11,0:11:33.10:0,33,588	0/0:11,0:11:29.74:0,30,531	0/0:30,0:30:87.29:0,87,1600	0/0:23,0:23:57.20:0,57,1064	0/0:15,0:15:45.15:0,45,843	0/0:22,0:22:66.23:0,66,1234	0/0:8,0:8:24.08:0,24,450
chr10	72885098	.	A	AAAAC	5944.26	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-7.842;DP=662;FS=5.627;HRun=0;HaplotypeScore=108.7796;InbreedingCoeff=0.9790;MQ=68.85;MQ0=0;MQRankSum=0.746;QD=38.35;ReadPosRankSum=0.735;VQSLOD=4.9831;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,30:45:75.26:1817,75,0	0/0:6,0:6:9.02:0,9,115	0/0:22,0:17:11.60:0,12,194	0/0:24,0:22:24.08:0,24,365	0/0:26,0:26:48.16:0,48,779	0/0:20,0:20:48.15:0,48,752	0/0:27,0:26:63.16:0,63,944	0/0:17,0:17:27.09:0,27,436	0/0:23,0:23:51.17:0,51,802	0/0:23,0:23:45.13:0,45,684	0/0:24,0:24:45.14:0,45,707	1/1:15,14:29:36.12:856,36,0	1/1:9,7:16:27.09:636,27,0	0/0:24,0:24:48.14:0,48,729	0/0:32,0:32:54.17:0,54,848	0/0:19,0:19:48.16:0,48,757	0/0:47,0:47:99:0,111,1751	0/0:17,0:17:42.07:0,42,603	0/0:23,0:23:48.06:0,48,654	0/0:29,0:29:81.26:0,81,1268	0/0:26,0:26:45.15:0,45,723	1/1:8,9:19:24.03:528,24,0	1/1:6,10:17:24.08:581,24,0	1/1:4,24:29:63.22:1526,63,0	0/0:21,0:21:54.18:0,54,853	0/0:17,0:17:42.12:0,42,618	0/0:31,0:31:72.24:0,72,1147	0/0:9,0:9:21.07:0,21,341
chr10	72885694	.	A	ATCT	8066.48	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=0.075;DP=582;FS=0.352;HRun=0;HaplotypeScore=93.8685;InbreedingCoeff=0.9552;MQ=59.07;MQ0=9;MQRankSum=-1.580;QD=48.30;ReadPosRankSum=1.247;VQSLOD=6.6631;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,21:43:99:2141,117,0	0/0:9,0:9:27:0,27,362	0/0:31,0:6:17.75:0,18,214	0/0:25,0:15:1.58:0,2,207	0/0:19,0:19:46.08:0,46,797	0/0:11,0:10:30.07:0,30,483	0/0:29,0:29:71.99:0,72,1140	0/0:21,0:19:47.48:0,47,668	0/0:26,0:26:78.18:0,78,1219	0/0:16,0:15:41.32:0,41,588	0/0:17,0:17:45.06:0,45,702	1/1:13,13:26:72.15:1431,72,0	1/1:9,18:27:75.08:1364,75,0	0/0:15,0:14:42.11:0,42,657	0/0:25,0:25:69.13:0,69,1021	0/0:10,0:10:30.09:0,30,511	0/0:16,0:16:42.13:0,42,733	0/0:10,0:10:26.40:0,26,415	0/0:15,0:16:48.10:0,48,739	0/0:17,0:17:50.25:0,50,737	0/0:31,0:30:78.25:0,78,1384	1/1:9,15:24:53.90:909,54,0	1/1:11,10:21:44.93:757,45,0	1/1:12,13:26:72.19:1465,72,0	0/0:16,0:16:48.14:0,48,768	0/0:15,0:15:42.04:0,42,539	0/0:24,0:24:72.17:0,72,1136	0/0:16,0:16:44.97:0,45,598
chr10	72885749	.	C	CTCT	6419.96	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-1.590;DP=567;FS=3.501;HRun=0;HaplotypeScore=92.0267;InbreedingCoeff=0.9954;MQ=57.65;MQ0=5;MQRankSum=-0.850;QD=39.39;ReadPosRankSum=2.184;VQSLOD=6.1422;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,29:40:99:1831,99,0	0/0:9,0:8:24.07:0,24,367	0/0:25,0:14:26.21:0,26,320	0/0:17,0:9:18.02:0,18,275	0/0:26,0:26:72.22:0,72,1153	0/0:15,0:15:42.11:0,42,647	0/0:20,0:20:54.05:0,54,757	0/0:22,0:21:54.02:0,54,683	0/0:23,0:23:63.02:0,63,826	0/0:19,0:19:56.97:0,57,839	0/0:19,0:19:48.09:0,48,712	1/1:6,20:27:60.17:1218,60,0	1/1:4,26:31:62.96:1206,63,0	0/0:16,0:16:42.10:0,42,660	0/0:24,0:24:72.16:0,72,1076	0/0:17,0:17:45.15:0,45,764	0/0:18,0:17:45.99:0,46,711	0/0:17,0:17:29.23:0,29,648	0/0:16,0:15:42.12:0,42,630	0/0:13,0:13:33.10:0,33,530	0/0:34,0:34:93.20:0,93,1392	1/1:9,19:28:59.35:1078,59,0	1/1:4,13:17:26.51:457,27,0	1/1:4,15:20:30.09:630,30,0	0/0:18,0:17:51.46:0,51,723	0/0:12,0:12:30.08:0,30,439	0/0:18,0:18:51.17:0,51,852	0/0:6,0:6:18.04:0,18,278
chr10	72886145	.	CT	C	3890.02	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.977;DP=632;FS=2.161;HRun=1;HaplotypeScore=90.1882;InbreedingCoeff=0.9651;MQ=78.93;MQ0=0;MQRankSum=-5.124;QD=29.03;ReadPosRankSum=-1.189;VQSLOD=3.1865;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,25:41:99:1221,112,0	0/0:10,0:10:30.10:0,30,472	0/0:22,0:22:49.49:0,49,830	0/0:17,0:17:51.12:0,51,694	0/0:17,0:17:45.12:0,45,644	0/0:27,0:27:78.23:0,78,1190	0/0:31,0:31:93.29:0,93,1427	0/0:29,0:29:84.24:0,84,1206	0/0:24,0:24:68.92:0,69,1001	0/0:27,0:26:81.25:0,81,1204	0/0:20,0:20:39.88:0,40,535	1/1:13,15:28:75.64:822,76,0	1/1:5,10:15:41.94:506,42,0	0/0:26,0:26:78.24:0,78,1184	0/0:24,0:24:69.21:0,69,1055	0/0:18,0:18:54.14:0,54,833	0/0:40,0:40:99:0,117,1866	0/0:23,0:23:69.18:0,69,1041	0/0:23,0:23:69.22:0,69,1062	0/0:24,0:24:72.21:0,72,1063	0/0:43,0:43:99:0,126,1895	1/1:9,9:18:41.82:446,42,0	1/1:6,7:13:29.81:340,30,0	1/1:5,14:19:45.40:554,45,0	0/0:15,0:15:42.13:0,42,633	0/0:19,0:19:57.17:0,57,842	0/0:18,0:17:54.15:0,54,813	0/0:1,0:1:3.01:0,3,48
chr10	72886175	.	AT	A	2691.73	PASS	AB=0.944;AC=14;AF=0.250;AN=56;BaseQRankSum=12.062;DP=633;FS=4.626;HRun=10;HaplotypeScore=94.8622;InbreedingCoeff=0.8507;MQ=66.93;MQ0=0;MQRankSum=-4.493;QD=17.04;ReadPosRankSum=-0.129;VQSLOD=3.8122;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,36:43:64.82:780,65,0	0/0:11,0:11:30.07:0,30,324	0/1:7,1:7:12.05:12,0,88	0/1:10,0:9:1.47:1,0,20	0/0:15,0:15:36.09:0,36,391	0/0:19,0:19:51.14:0,51,564	0/0:25,0:25:66.18:0,66,730	0/0:35,0:36:90.08:0,90,977	0/0:26,0:26:69.17:0,69,755	0/0:9,0:28:56.91:0,57,291	0/0:3,0:15:35.62:0,36,192	1/1:1,27:28:77.97:677,78,0	1/1:1,18:19:33.26:422,33,0	0/0:27,0:27:69.17:0,69,754	0/0:24,0:24:60.14:0,60,649	0/0:18,0:18:51.12:0,51,555	0/0:8,0:44:99:0,99,512	0/0:6,0:31:82.99:0,83,457	0/0:24,0:24:69.19:0,69,763	0/0:25,0:25:63.15:0,63,681	0/0:34,0:34:96.19:0,96,1047	1/1:2,16:18:44.98:391,45,0	1/1:2,13:15:38.98:338,39,0	1/1:3,14:17:29.83:260,30,0	0/0:1,0:19:39.80:0,40,199	0/0:27,0:28:71.98:0,72,764	0/0:19,0:18:42.11:0,42,464	0/0:7,0:7:21:0,21,203
chr10	72887956	.	TTTA	T	596.47	PASS	AB=1.000;AC=15;AF=0.375;AN=40;BaseQRankSum=3.015;DP=181;FS=2.106;HRun=0;HaplotypeScore=41.2095;InbreedingCoeff=0.3836;MQ=58.67;MQ0=1;MQRankSum=0.556;QD=5.85;ReadPosRankSum=2.716;VQSLOD=0.9880;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:1,0:1:3.01:0,3,58	./.	./.	0/0:4,0:4:2.99:0,3,24	0/0:5,0:5:9.02:0,9,141	./.	1/1:16,0:30:8.94:67,9,0	0/0:5,0:5:3.01:0,3,58	0/1:6,0:6:13.83:70,0,14	0/1:4,0:4:26.08:41,0,26	1/1:1,0:1:2.94:18,3,0	1/1:8,0:8:8.79:52,9,0	0/0:3,0:3:6.01:0,6,83	0/0:5,0:5:6.02:0,6,68	./.	0/1:19,0:19:82.33:82,0,215	1/1:8,17:25:30.04:351,30,0	1/1:5,0:5:3:26,3,0	0/0:5,0:5:12:0,12,132	./.	./.	1/1:4,0:4:3.01:31,3,0	./.	0/0:7,0:7:15.03:0,15,159	0/0:6,0:6:15.04:0,15,218	0/0:7,0:7:17.97:0,18,259	0/0:12,0:12:21.05:0,21,373
chr10	72888103	.	C	CTTT	1478.34	PASS	AB=0.875;AC=13;AF=0.232;AN=56;BaseQRankSum=-1.771;DP=342;FS=1.675;HRun=10;HaplotypeScore=50.4330;InbreedingCoeff=0.7972;MQ=71.43;MQ0=0;MQRankSum=-0.857;QD=19.20;ReadPosRankSum=0.876;VQSLOD=0.9212;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,1:15:18.06:261,18,0	0/0:2,0:2:3.01:0,3,36	0/0:16,0:17:16.97:0,17,194	0/0:9,0:9:12.77:0,13,108	0/0:11,0:11:33.10:0,33,401	0/0:14,0:14:36.08:0,36,438	0/0:18,0:19:42.92:0,43,484	0/0:30,0:30:47.98:0,48,567	0/0:4,0:4:12.04:0,12,146	0/0:11,0:12:28.71:0,29,342	0/0:2,0:2:3.01:0,3,36	1/1:0,9:9:9.03:173,9,0	1/1:2,9:12:15.05:288,15,0	0/1:12,2:14:24.62:25,0,332	0/0:21,0:22:58.49:0,58,714	0/0:6,0:7:14.96:0,15,164	0/0:17,0:18:48.02:0,48,550	0/0:13,0:13:28.59:0,29,316	0/0:11,0:12:26.91:0,27,288	0/0:9,0:9:24.07:0,24,292	0/0:12,0:15:29.71:0,30,363	1/1:0,3:5:13.27:196,13,0	1/1:3,10:13:15.52:271,16,0	1/1:1,7:9:24.08:447,24,0	0/0:8,0:8:18.01:0,18,207	0/0:16,0:16:36.06:0,36,423	0/0:13,0:14:36:0,36,406	0/0:9,0:9:21.05:0,21,255
chr10	72889229	.	G	GT	4490.20	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=16.215;DP=700;FS=0.379;HRun=0;HaplotypeScore=95.0948;InbreedingCoeff=0.9990;MQ=88.89;MQ0=0;MQRankSum=-1.866;QD=31.40;ReadPosRankSum=4.753;VQSLOD=4.6471;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,37:40:86.15:1191,86,0	0/0:11,0:11:33.10:0,33,446	0/0:24,0:24:72.03:0,72,930	0/0:30,0:30:79.62:0,80,1096	0/0:27,0:27:78.25:0,78,1068	0/0:22,0:22:57.19:0,57,796	0/0:29,0:29:87.28:0,87,1201	0/0:28,0:28:81.21:0,81,1048	0/0:23,0:23:69.22:0,69,949	0/0:27,0:27:72.24:0,72,993	0/0:27,0:27:78.26:0,78,1084	1/1:0,21:21:53.21:724,53,0	1/1:0,15:15:29.69:378,30,0	0/0:26,0:26:78.21:0,78,1043	0/0:31,0:31:93.28:0,93,1251	0/0:32,0:32:96.30:0,96,1307	0/0:29,0:29:87.24:0,87,1149	0/0:21,0:20:60.17:0,60,802	0/0:15,0:15:45.13:0,45,611	0/0:30,0:30:87.24:0,87,1157	0/0:43,0:43:99:0,126,1629	1/1:2,23:25:66.21:911,66,0	1/1:0,21:21:47.91:608,48,0	1/1:0,21:21:48.16:678,48,0	0/0:25,0:25:75.19:0,75,955	0/0:30,0:30:87.27:0,87,1177	0/0:20,0:20:60.20:0,60,825	0/0:7,0:7:21.07:0,21,293
chr10	72890729	.	GGA	G	588.13	PASS	AB=0.802;AC=5;AF=0.093;AN=54;BaseQRankSum=7.155;DP=568;FS=44.513;HRun=0;HaplotypeScore=102.9280;InbreedingCoeff=0.0407;MQ=62.57;MQ0=12;MQRankSum=-6.339;QD=7.35;ReadPosRankSum=-1.295;VQSLOD=1.2209;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,11:32:99:314,0,242	0/0:7,0:7:21.07:0,21,381	0/0:39,0:17:41.83:0,42,651	0/0:33,0:19:44.90:0,45,647	0/0:13,0:13:39.13:0,39,742	0/0:18,0:18:54.18:0,54,1013	0/0:34,0:34:99:0,99,1816	0/0:25,0:24:51.17:0,51,942	0/0:19,0:18:48.16:0,48,905	0/0:23,0:22:60.20:0,60,1128	0/0:10,0:10:27.09:0,27,500	0/1:9,4:13:71.75:149,0,72	0/1:5,1:6:34.59:35,0,38	0/0:20,0:20:57.18:0,57,1025	0/0:17,0:17:48.15:0,48,884	0/0:12,0:12:36.12:0,36,672	0/0:29,0:29:84.27:0,84,1566	0/0:20,0:20:57.20:0,57,1096	0/0:19,0:17:45.15:0,45,767	0/0:13,0:12:20.99:0,21,385	0/0:54,0:54:99:0,134,2809	./.	0/1:11,0:11:0:0,0,0	0/1:8,10:18:37.14:199,0,37	0/0:21,0:20:60.21:0,60,1157	0/0:30,0:30:81.27:0,81,1490	0/0:20,0:20:60.17:0,60,1077	0/0:5,0:5:15.05:0,15,290
chr10	72890746	.	AAGT	A	1046.73	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=10.212;DP=532;FS=10.523;HRun=0;HaplotypeScore=111.5455;InbreedingCoeff=0.9083;MQ=64.73;MQ0=4;MQRankSum=-8.436;QD=14.54;ReadPosRankSum=-0.405;VQSLOD=2.5881;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,16:28:47.91:572,48,0	0/0:6,0:6:18.06:0,18,435	0/0:33,0:15:27.61:0,28,462	0/0:30,1:16:4.72:0,5,425	0/0:10,0:10:30.10:0,30,715	0/0:19,0:19:57.20:0,57,1402	0/0:34,0:34:99:0,102,2406	0/0:28,0:28:74.94:0,75,1606	0/0:18,0:18:54.17:0,54,1234	0/0:22,0:22:66.22:0,66,1463	0/0:8,0:8:24.08:0,24,540	1/1:5,9:14:26.94:296,27,0	1/1:1,4:5:12.04:153,12,0	0/0:16,0:16:48.14:0,48,1096	0/0:16,0:16:45.15:0,45,1050	0/0:8,0:8:24.08:0,24,569	0/0:30,0:30:84.22:0,84,1727	0/0:18,0:18:50.63:0,51,1224	0/0:11,0:11:33.09:0,33,625	0/0:9,0:8:24.08:0,24,564	0/0:55,0:55:99:0,159,3715	./.	0/1:11,0:11:0:0,0,0	1/1:9,4:14:17.89:179,18,0	0/0:22,0:21:63.22:0,63,1460	0/0:28,0:28:84.29:0,84,2050	0/0:23,0:23:66.22:0,66,1485	0/0:8,0:8:24.08:0,24,559
chr10	72890752	.	AAG	A	423.07	PASS	AB=0.702;AC=7;AF=0.135;AN=52;BaseQRankSum=9.882;DP=501;FS=11.793;HRun=0;HaplotypeScore=91.2038;InbreedingCoeff=0.5818;MQ=64.52;MQ0=2;MQRankSum=-8.333;QD=6.13;ReadPosRankSum=0.502;VQSLOD=1.8244;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:30.57:313,31,0	0/0:6,0:6:18.06:0,18,333	0/1:26,1:12:1.38:1,0,339	0/0:32,0:18:5.25:0,5,466	0/0:10,0:10:30.10:0,30,576	0/0:20,0:20:60.21:0,60,1158	0/0:34,0:34:99:0,99,1827	0/0:25,0:25:69.02:0,69,1249	0/0:19,0:19:51.17:0,51,960	0/0:21,0:21:63.21:0,63,1158	0/0:8,0:8:24.08:0,24,463	0/1:0,10:10:2.32:123,0,2	1/1:2,3:5:9.47:79,9,0	0/0:14,0:14:42.14:0,42,806	0/0:16,0:16:45.15:0,45,847	0/0:8,0:8:24.08:0,24,462	0/0:23,0:23:69.20:0,69,1273	0/0:17,0:17:48.16:0,48,908	0/0:8,0:8:21.07:0,21,392	0/0:9,0:9:27.07:0,27,440	0/0:61,1:62:99:0,138,3271	./.	./.	0/1:4,5:9:20.45:36,0,20	0/0:21,0:21:63.16:0,63,1099	0/0:31,0:31:93.30:0,93,1724	0/0:22,0:22:63.22:0,63,1209	0/0:8,0:8:24.08:0,24,445
chr10	72890757	.	GA	G	440.72	PASS	AB=0.722;AC=7;AF=0.135;AN=52;BaseQRankSum=9.391;DP=502;FS=13.877;HRun=2;HaplotypeScore=82.8777;InbreedingCoeff=0.8670;MQ=62.98;MQ0=2;MQRankSum=-7.481;QD=9.38;ReadPosRankSum=1.585;VQSLOD=0.1000;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:40.70:290,41,0	0/0:6,0:6:15.05:0,15,234	0/0:24,0:10:27.03:0,27,356	0/0:31,1:19:45.33:0,45,552	0/0:10,0:10:30.05:0,30,424	0/0:20,0:20:60.20:0,60,959	0/0:35,0:35:99:0,105,1634	0/0:21,0:21:57.08:0,57,855	0/0:19,0:19:57.15:0,57,827	0/0:20,0:20:57.19:0,57,879	0/0:9,0:9:27.09:0,27,407	1/1:0,10:10:13.21:121,13,0	1/1:2,4:6:14.49:83,14,0	0/0:15,0:15:45.13:0,45,678	0/0:17,0:17:48.16:0,48,764	0/0:9,0:9:24.07:0,24,360	0/0:24,0:24:72.25:0,72,1137	0/0:20,0:20:57.19:0,57,868	0/0:7,0:7:21.07:0,21,336	0/0:9,0:9:24.08:0,24,372	0/0:62,0:62:99:0,183,2854	./.	./.	0/1:8,5:13:3.66:89,0,4	0/0:17,0:17:51.17:0,51,803	0/0:29,0:29:87.29:0,87,1361	0/0:23,0:23:69.19:0,69,1029	0/0:9,0:9:26.73:0,27,337
chr10	72898192	.	AAAAC	A	3886.70	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.559;DP=580;FS=1.484;HRun=0;HaplotypeScore=95.9984;InbreedingCoeff=0.9817;MQ=60.79;MQ0=2;MQRankSum=1.320;QD=27.18;ReadPosRankSum=3.598;VQSLOD=3.6244;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,21:32:22.52:804,23,0	0/0:14,0:14:36.12:0,36,845	0/0:14,0:8:18.06:0,18,402	0/0:14,0:8:12.04:0,12,279	0/0:22,0:22:54.15:0,54,1125	0/0:31,0:31:78.27:0,78,1792	0/0:24,0:24:54.18:0,54,1211	0/0:35,0:35:42.11:0,42,804	0/0:22,0:22:51.16:0,51,1196	0/0:29,0:29:69.24:0,69,1632	0/0:21,0:21:54.15:0,54,1215	1/1:3,11:14:30.10:491,30,0	1/1:7,14:21:30.10:492,30,0	0/0:7,0:7:15.04:0,15,291	0/0:14,0:14:33.11:0,33,757	0/0:20,0:20:42.13:0,42,939	0/0:21,0:21:33.11:0,33,749	0/0:20,0:20:33.57:0,34,854	0/0:15,0:15:30.10:0,30,656	0/0:25,0:25:54.18:0,54,1240	0/0:8,0:8:12.04:0,12,277	1/1:4,25:29:57.15:904,57,0	1/1:3,20:23:38.05:606,38,0	1/1:7,17:24:36.12:590,36,0	0/0:21,0:21:45.15:0,45,1058	0/0:28,0:28:69.23:0,69,1577	0/0:19,0:19:42.12:0,42,973	0/0:13,0:13:36.12:0,36,878
chr10	72898609	.	TATCATCATCATCATC	T	1499.50	PASS	AC=12;AF=0.240;AN=50;BaseQRankSum=5.128;DP=700;FS=0.827;HRun=0;HaplotypeScore=261.0182;InbreedingCoeff=0.8319;MQ=69.57;MQ0=4;MQRankSum=-4.567;QD=10.41;ReadPosRankSum=-0.425;VQSLOD=2.4173;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:28:11.96:122,12,0	0/0:6,0:8:9.03:0,9,620	./.	./.	0/0:14,0:24:19.57:0,20,1229	0/0:16,0:34:24.07:0,24,1376	0/0:30,0:31:41.39:0,41,1606	0/0:34,0:34:6:0,6,52	0/0:15,0:23:30.10:0,30,1563	0/0:15,0:21:26.91:0,27,440	0/0:10,0:22:20.59:0,21,133	1/1:16,11:27:21.07:744,21,0	1/1:16,9:25:9.03:300,9,0	0/0:18,0:27:15.03:0,15,705	0/0:24,0:38:20.94:0,21,1188	0/0:18,0:28:36.10:0,36,1948	0/0:6,0:13:5.75:0,6,31	1/1:8,0:17:3.01:105,3,0	0/0:18,0:17:15.04:0,15,613	0/0:35,0:34:33.09:0,33,1662	0/0:41,0:42:60.17:0,60,3152	1/1:17,7:23:8.99:215,9,0	1/1:11,12:23:6.02:174,6,0	./.	0/0:12,0:19:17.60:0,18,165	0/0:28,0:29:27.09:0,27,1546	0/0:27,0:28:27.09:0,27,1364	0/0:17,0:17:12.04:0,12,728
chr10	72903136	.	A	AAAC	6930.05	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.826;DP=782;FS=11.048;HRun=0;HaplotypeScore=110.2409;InbreedingCoeff=0.9986;MQ=64.33;MQ0=4;MQRankSum=2.076;QD=38.72;ReadPosRankSum=3.581;VQSLOD=5.6260;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,33:43:70.94:1609,71,0	0/0:9,0:9:24.05:0,24,321	0/0:48,0:32:66.12:0,66,861	0/0:49,0:24:20.92:0,21,341	0/0:29,0:29:69.23:0,69,1002	0/0:19,0:19:42.13:0,42,580	0/0:23,0:23:51.17:0,51,732	0/0:21,0:21:41.79:0,42,576	0/0:26,0:26:60.19:0,60,849	0/0:33,0:33:87.29:0,87,1265	0/0:24,0:24:60.19:0,60,853	1/1:6,24:31:54.19:1109,54,0	1/1:2,17:20:42.14:863,42,0	0/0:28,0:28:63.19:0,63,880	0/0:23,0:23:63.21:0,63,917	0/0:34,0:34:78.26:0,78,1118	0/0:42,0:42:90.28:0,90,1262	0/0:25,0:25:36.60:0,37,830	0/0:19,0:18:30.99:0,31,438	0/0:19,0:19:45.15:0,45,655	0/0:26,0:26:69.18:0,69,942	1/1:7,27:34:69.19:1333,69,0	1/1:5,25:30:57.20:1158,57,0	1/1:3,17:21:42.14:858,42,0	0/0:23,0:23:61.45:0,61,868	0/0:28,0:28:72.23:0,72,1022	0/0:40,0:40:99:0,108,1542	0/0:15,0:15:42.14:0,42,611
chr10	72903403	.	T	TTTTGTTTG	6439.56	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-1.120;DP=700;FS=4.337;HRun=0;HaplotypeScore=166.5381;InbreedingCoeff=0.9696;MQ=64.60;MQ0=5;MQRankSum=-6.702;QD=38.10;ReadPosRankSum=1.812;VQSLOD=4.7456;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:45:73.87:593,74,0	0/0:10,0:10:24.07:0,24,491	0/0:29,0:26:24.07:0,24,374	0/0:26,0:20:6.45:0,6,91	0/0:24,0:24:54.15:0,54,1221	0/0:23,0:23:48.16:0,48,1071	0/0:26,0:26:45.15:0,45,1042	0/0:29,0:29:21.05:0,21,398	0/0:25,0:25:60.21:0,60,1366	0/0:34,0:34:60.15:0,60,1287	0/0:21,0:21:54.18:0,54,1269	1/1:14,22:38:45.15:1859,45,0	1/1:14,10:26:21.07:856,21,0	0/0:28,0:28:57.20:0,57,1340	0/0:24,0:24:51.14:0,51,1143	0/0:21,0:21:39.11:0,39,788	0/0:32,0:32:60.15:0,60,1358	0/0:23,0:23:48.16:0,48,1159	0/0:24,0:22:33:0,33,762	0/0:17,0:17:36.12:0,36,855	0/0:21,0:21:36.12:0,36,799	1/1:5,15:23:42.14:1550,42,0	1/1:7,6:15:21.54:856,22,0	1/1:14,7:22:18.06:726,18,0	0/0:31,0:31:63.19:0,63,1378	0/0:22,0:22:45.13:0,45,932	0/0:28,0:27:72.22:0,72,1636	0/0:13,0:13:12.03:0,12,255
chr10	72905055	.	A	AGATAGAT	115.31	PASS	AB=1.000;AC=5;AF=0.156;AN=32;BaseQRankSum=1.298;DP=424;FS=0.000;HRun=0;HaplotypeScore=89.9624;InbreedingCoeff=0.4481;MQ=24.42;MQ0=220;MQRankSum=-1.817;QD=1.36;ReadPosRankSum=0.029;VQSLOD=1.2214;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/0:22,0:17:9.03:0,9,161	./.	0/0:6,0:1:1.25:0,1,3	./.	0/0:17,0:7:2.91:0,3,46	0/0:21,0:13:27.09:0,27,631	0/1:24,0:18:0:0,0,0	./.	./.	0/1:14,0:3:0:1,0,0	0/0:19,0:5:0:0,0,0	./.	./.	0/0:17,0:2:4.57:0,5,75	0/0:10,0:6:12.04:0,12,252	0/0:29,0:21:12.04:0,12,242	0/0:14,0:4:3.01:0,3,70	0/1:15,0:11:0:0,0,0	1/1:18,14:25:5.94:190,6,0	./.	./.	0/0:20,0:14:27.09:0,27,609	0/0:16,0:11:5.98:0,6,66	0/0:15,0:9:14.98:0,15,184
chr10	72905102	.	C	CATAG	1233.71	PASS	AB=0.902;AC=16;AF=0.421;AN=38;BaseQRankSum=-3.197;DP=435;FS=8.104;HRun=0;HaplotypeScore=116.4813;InbreedingCoeff=0.5984;MQ=33.10;MQ0=130;MQRankSum=0.485;QD=7.52;ReadPosRankSum=-0.154;VQSLOD=1.9332;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:11,0:8:21.07:0,21,315	./.	./.	0/0:37,0:35:41.25:0,41,641	0/1:23,0:15:0.01:1,0,0	0/0:9,0:6:8.92:0,9,133	./.	0/0:18,0:14:11.50:0,12,166	1/1:7,0:6:5.97:65,6,0	./.	1/1:8,0:3:2.97:20,3,0	./.	0/0:16,0:12:1.84:0,2,45	0/1:24,0:15:0.34:0,0,1	1/1:6,7:8:9.03:184,9,0	1/1:10,0:4:3.01:40,3,0	./.	0/0:13,0:8:18.04:0,18,253	0/1:9,15:21:3.81:402,0,4	1/1:5,14:16:27.09:635,27,0	1/1:9,0:3:2.94:18,3,0	0/1:21,0:14:0.01:0,0,0	./.	./.	0/0:26,0:24:60.18:0,60,885	0/0:25,0:23:14.55:0,15,204	0/0:36,0:34:78.13:0,78,1076
chr10	72906145	.	CATAG	C	867.30	PASS	AC=16;AF=0.615;AN=26;BaseQRankSum=-2.008;DP=196;FS=3.132;HRun=0;HaplotypeScore=43.3408;InbreedingCoeff=0.3862;MQ=20.29;MQ0=123;MQRankSum=-1.484;QD=11.56;ReadPosRankSum=1.135;VQSLOD=2.2919;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:2:2.99:0,3,24	./.	./.	./.	./.	./.	./.	./.	./.	1/1:5,8:6:15.05:237,15,0	0/0:5,5:4:0:0,0,0	1/1:2,7:7:2.65:47,3,0	1/1:0,4:4:3.01:47,3,0	./.	./.	1/1:6,0:1:2.96:19,3,0	1/1:7,10:12:21.07:322,21,0	0/0:11,0:5:2.98:0,3,21	./.	./.	0/0:6,0:1:0.89:0,1,2	0/0:2,8:8:0:0,0,0	1/1:0,4:4:2.86:47,3,0	1/1:2,7:7:3.01:47,3,0	1/1:2,11:10:12.04:190,12,0	./.	./.	./.
chr10	72908504	.	A	AAAAAG	5731.70	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-10.812;DP=621;FS=2.205;HRun=0;HaplotypeScore=113.5382;InbreedingCoeff=0.9854;MQ=74.06;MQ0=2;MQRankSum=-1.260;QD=44.09;ReadPosRankSum=3.008;VQSLOD=4.6103;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,20:29:44.62:1361,45,0	0/0:14,0:14:30.08:0,30,481	0/0:44,0:29:31.44:0,31,376	0/0:48,0:30:22.01:0,22,388	0/0:17,0:17:42.12:0,42,679	0/0:26,0:26:55.43:0,55,977	0/0:16,0:16:30.06:0,30,488	0/0:35,0:34:63.18:0,63,984	0/0:24,0:24:57.20:0,57,1052	0/0:23,0:23:57.01:0,57,937	0/0:15,0:15:33.11:0,33,613	1/1:3,10:13:18.06:513,18,0	1/1:3,13:16:30.10:852,30,0	0/0:13,0:13:21.07:0,21,383	0/0:22,0:22:48.14:0,48,815	0/0:22,0:22:50.52:0,51,828	0/0:38,0:38:78.21:0,78,1353	1/1:1,19:21:33.11:940,33,0	0/0:20,0:19:42.11:0,42,623	0/0:20,0:20:42.13:0,42,712	0/0:10,0:10:24.08:0,24,446	1/1:6,18:25:42.14:985,42,0	1/1:4,13:18:12.65:749,13,0	1/1:1,7:8:12.04:330,12,0	0/0:30,0:30:69.23:0,69,1249	0/0:19,0:19:45.14:0,45,771	0/0:25,0:25:60.19:0,60,1048	0/0:10,0:10:24.05:0,24,356
chr10	72909910	.	T	TCA	2419.28	PASS	AB=0.796;AC=12;AF=0.214;AN=56;BaseQRankSum=-5.767;DP=555;FS=1.160;HRun=0;HaplotypeScore=81.2644;InbreedingCoeff=0.8424;MQ=69.50;MQ0=0;MQRankSum=-1.127;QD=17.92;ReadPosRankSum=0.627;VQSLOD=3.2632;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:24:28.72:191,29,0	0/0:3,0:3:9.03:0,9,107	0/0:28,0:19:23.74:0,24,254	0/1:29,0:22:3.10:3,0,192	0/0:19,0:19:36.11:0,36,429	0/0:28,0:28:67.92:0,68,820	0/0:23,0:23:55.09:0,55,632	0/0:24,0:24:39.07:0,39,433	0/0:17,0:17:30.09:0,30,357	0/0:20,0:20:30.09:0,30,358	0/0:18,0:18:36.11:0,36,429	0/1:5,11:16:2.66:445,0,3	1/1:3,6:9:18.06:287,18,0	0/0:10,0:10:21.06:0,21,250	0/0:22,0:22:48.13:0,48,561	0/0:15,0:15:33.09:0,33,382	0/0:20,0:20:45.14:0,45,536	0/0:14,0:14:30.09:0,30,358	0/0:17,0:16:30.08:0,30,349	0/0:20,0:20:51.12:0,51,584	0/0:63,0:65:99:0,135,1780	1/1:3,13:15:36.12:573,36,0	1/1:6,11:18:24.08:381,24,0	1/1:4,18:23:45.15:717,45,0	0/0:14,0:13:36.11:0,36,429	0/0:19,0:19:48.14:0,48,563	0/0:16,0:16:30.09:0,30,357	0/0:8,0:8:15.04:0,15,179
chr10	72911933	.	AAGAGAGAGAG	A	1927.12	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.045;DP=595;FS=15.211;HRun=0;HaplotypeScore=164.2900;InbreedingCoeff=0.9265;MQ=62.00;MQ0=18;MQRankSum=-5.248;QD=23.22;ReadPosRankSum=1.955;VQSLOD=2.1487;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:54.62:0,55,1553	0/0:4,0:4:9.03:0,9,431	0/0:35,0:17:19.75:0,20,236	0/0:49,0:15:14.68:0,15,200	0/0:16,0:16:30.57:0,31,1272	0/0:17,0:17:30.10:0,30,1209	0/0:26,0:28:51.16:0,51,1947	0/0:27,0:25:51.17:0,51,1597	0/0:10,0:14:15.05:0,15,509	0/0:23,0:23:54.15:0,54,1742	0/0:9,0:11:21.07:0,21,689	1/1:3,9:13:12.04:331,12,0	1/1:12,6:18:36.08:853,36,0	0/0:20,0:20:36.12:0,36,1422	0/0:15,0:17:37.01:0,37,1465	0/0:18,0:18:39.11:0,39,1304	0/0:23,0:25:60.19:0,60,2367	0/0:15,0:15:27.07:0,27,802	0/0:16,0:14:30.02:0,30,1126	0/0:22,0:22:45.02:0,45,1856	0/0:29,0:31:69.22:0,69,2369	1/1:9,4:13:24.07:448,24,0	1/1:5,14:19:8.14:273,8,0	1/1:4,15:19:6.02:184,6,0	0/0:21,0:20:51.17:0,51,1915	0/0:27,0:27:49.38:0,49,1648	0/0:18,0:19:39.06:0,39,1274	0/0:17,0:19:42.11:0,42,1500
chr10	72911962	.	AGC	A	575.32	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=8.412;DP=586;FS=18.818;HRun=0;HaplotypeScore=86.6409;InbreedingCoeff=0.3922;MQ=71.95;MQ0=18;MQRankSum=-1.546;QD=10.65;ReadPosRankSum=3.698;VQSLOD=1.5853;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,8:25:54.11:665,54,0	0/0:5,0:5:14.99:0,15,208	0/0:49,0:24:40.13:0,40,419	0/0:59,0:19:27.47:0,27,323	0/0:17,0:17:23.86:0,24,514	0/0:17,0:17:44.95:0,45,597	0/0:24,0:24:46.41:0,46,736	0/0:35,0:33:70.48:0,70,802	0/0:15,0:15:1.83:0,2,227	0/0:20,0:20:24.40:0,24,590	0/0:13,0:13:10.03:0,10,253	0/0:14,0:14:12.98:0,13,101	0/1:13,0:12:13.50:13,0,80	0/0:11,0:11:33.07:0,33,536	0/0:15,0:15:14.93:0,15,487	0/0:18,0:17:41.99:0,42,596	0/0:24,0:23:26.04:0,26,716	0/0:14,0:14:32.28:0,32,234	0/0:21,0:20:47.39:0,47,487	0/0:16,0:15:24.39:0,24,552	0/0:30,0:29:3.91:0,4,552	0/0:11,0:11:23.78:0,24,149	0/1:15,0:15:0.46:0,0,19	0/0:20,0:20:7.42:0,7,62	0/0:17,0:16:28.38:0,28,492	0/0:21,0:20:46.25:0,46,655	0/0:18,0:18:23.27:0,23,528	0/0:28,0:27:35.90:0,36,715
chr10	72912050	.	CCTATCTATCTATCATCTAT	C	1116.06	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-3.501;DP=534;FS=0.000;HRun=0;HaplotypeScore=239.7326;InbreedingCoeff=0.8199;MQ=58.24;MQ0=8;MQRankSum=0.356;QD=10.84;ReadPosRankSum=3.244;VQSLOD=2.4021;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:15.05:229,15,0	0/0:5,0:5:12.04:0,12,798	0/0:16,0:7:12.03:0,12,150	0/0:18,0:7:12.04:0,12,168	0/0:27,0:27:61.76:0,62,1969	0/0:18,0:18:42.13:0,42,1507	0/0:15,0:14:27.09:0,27,532	0/0:30,0:30:78.25:0,78,1075	0/0:19,0:19:38.92:0,39,888	0/0:23,0:23:51.17:0,51,1441	0/0:17,0:17:39.08:0,39,914	1/1:2,15:17:3.01:156,3,0	1/1:2,9:11:2.92:156,3,0	0/0:15,0:15:39.13:0,39,986	0/0:13,0:13:36.12:0,36,2246	0/0:19,0:19:51.17:0,51,1746	0/0:24,0:24:54.18:0,54,977	0/0:18,0:17:42.14:0,42,1567	0/0:21,0:20:48.16:0,48,1996	0/0:14,0:14:33.11:0,33,1344	0/0:21,0:21:42.14:0,42,1489	1/1:2,21:23:2.94:138,3,0	1/1:1,17:19:2.71:156,3,0	1/1:14,0:14:27.09:436,27,0	0/0:20,0:20:50.90:0,51,808	0/0:29,0:29:81.27:0,81,3744	0/0:25,0:25:57.18:0,57,2803	0/0:24,0:23:63.21:0,63,1479
chr10	72912063	.	CATCT	C	2044.64	PASS	AB=0.901;AC=30;AF=0.625;AN=48;BaseQRankSum=6.113;DP=547;FS=0.000;HRun=0;HaplotypeScore=111.2476;InbreedingCoeff=0.4589;MQ=55.94;MQ0=9;MQRankSum=-3.361;QD=5.91;ReadPosRankSum=1.277;VQSLOD=1.6743;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:20:0.47:1,0,0	0/0:4,0:4:6.02:0,6,139	./.	./.	1/1:13,14:27:29.13:452,29,0	0/0:11,0:19:9.03:0,9,157	0/1:17,0:16:30.31:30,0,262	./.	1/1:9,1:14:15.02:157,15,0	1/1:8,0:20:24.89:241,25,0	1/1:11,11:22:15.05:219,15,0	1/1:15,0:15:3:28,3,0	1/1:9,0:9:2.67:28,3,0	1/1:12,6:18:12.04:181,12,0	0/0:6,0:18:21.07:0,21,383	1/1:9,12:21:33.11:499,33,0	1/1:20,0:30:2.78:27,3,0	0/1:9,5:17:4.24:233,0,4	0/0:25,0:24:15.05:0,15,347	0/0:17,0:17:24.08:0,24,552	0/0:15,0:19:9.03:0,9,169	1/1:22,0:22:2.68:11,3,0	1/1:18,0:18:2.84:28,3,0	./.	1/1:15,0:24:6.48:57,6,0	0/1:29,1:30:6.25:6,0,778	0/1:21,1:22:9.25:9,0,679	0/0:24,0:22:9.03:0,9,183
chr10	72912792	.	TCACACACACACACA	T	473.04	PASS	AB=0.821;AC=5;AF=0.104;AN=48;BaseQRankSum=3.603;DP=469;FS=4.234;HRun=0;HaplotypeScore=152.6956;InbreedingCoeff=0.6244;MQ=41.14;MQ0=35;MQRankSum=-2.557;QD=7.75;ReadPosRankSum=1.175;VQSLOD=2.3795;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,1:30:0:0,0,0	0/0:6,0:6:6.02:0,6,110	./.	./.	0/0:21,0:21:24.08:0,24,1116	0/0:19,0:16:15.99:0,16,805	0/0:26,0:23:15.99:0,16,732	0/0:22,0:18:24.55:0,25,676	0/0:26,0:21:31.35:0,31,1529	0/0:12,0:12:12.04:0,12,469	0/0:9,0:8:9.03:0,9,533	1/1:17,0:15:3.01:115,3,0	1/1:15,5:21:12.04:458,12,0	0/0:18,0:18:8.90:0,9,456	0/0:15,0:15:21.54:0,22,1129	0/0:14,0:14:15.52:0,16,689	0/0:12,0:12:30.03:0,30,1290	0/0:18,0:19:21.02:0,21,408	0/0:15,0:15:17.12:0,17,427	0/0:19,0:17:15.18:0,15,643	0/0:30,0:27:21.07:0,21,1090	0/1:18,5:20:0:0,0,0	./.	0/0:25,2:26:2.31:0,2,6	./.	0/0:18,0:17:26.19:0,26,645	0/0:9,0:9:21.07:0,21,851	0/0:8,0:6:6.02:0,6,281
chr10	72913953	.	T	TACAC	512.21	PASS	AB=1.000;AC=24;AF=0.500;AN=48;BaseQRankSum=-0.660;DP=447;FS=3.111;HRun=0;HaplotypeScore=97.3781;InbreedingCoeff=0.3405;MQ=62.32;MQ0=6;MQRankSum=-1.897;QD=2.02;ReadPosRankSum=-0.295;VQSLOD=1.7649;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:32:5.99:0,6,53	0/0:5,0:5:3.01:0,3,46	./.	./.	0/0:7,0:7:3.01:0,3,43	1/1:15,0:14:2.95:22,3,0	0/0:27,0:26:14.66:0,15,169	1/1:19,0:19:0.94:2,1,0	0/1:18,0:18:4.73:11,0,5	1/1:14,0:14:0.47:1,0,0	0/1:11,0:11:0:0,0,0	./.	1/1:17,0:17:5.74:88,6,0	0/1:6,0:6:0:0,0,0	0/0:15,0:15:3.01:0,3,45	0/0:10,0:10:3.01:0,3,45	1/1:26,0:28:3.22:13,3,0	0/0:12,0:15:5.45:0,5,55	./.	0/0:10,0:10:3:0,3,26	0/1:45,0:44:45.25:52,0,45	1/1:18,0:17:5.76:123,6,0	1/1:12,4:16:2.60:69,3,0	1/1:20,0:20:15.02:216,15,0	0/0:10,0:10:3:0,3,28	1/1:18,0:18:0.94:2,1,0	1/1:7,0:7:4.26:45,4,0	0/0:3,0:4:3:0,3,28
chr10	72918000	.	GGT	G	229.51	PASS	AB=0.957;AC=12;AF=0.214;AN=56;BaseQRankSum=2.529;DP=748;FS=4.902;HRun=0;HaplotypeScore=126.2157;InbreedingCoeff=-0.1552;MQ=65.32;MQ0=20;MQRankSum=1.857;QD=0.75;ReadPosRankSum=1.807;VQSLOD=1.8606;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:23:5.42:0,5,18	0/0:10,0:7:8.75:0,9,77	0/0:39,0:31:7.44:0,7,103	0/0:43,0:32:9.03:0,9,111	0/1:17,1:16:14.35:14,0,205	0/0:23,0:20:6.11:0,6,199	0/0:38,0:35:24.06:0,24,340	0/0:38,0:29:15:0,15,164	0/0:20,0:18:12.04:0,12,183	0/1:34,1:30:8.45:8,0,180	0/1:13,0:12:27.62:28,0,40	0/0:18,0:17:1.22:0,1,4	0/0:17,0:15:0.10:0,0,0	0/1:15,1:16:16.40:16,0,148	0/1:18,1:18:45.63:46,0,187	0/1:27,1:26:23.46:23,0,205	0/0:32,1:33:15.49:0,15,540	0/0:18,0:18:16.87:0,17,130	0/1:23,0:21:27.52:28,0,40	0/0:20,0:18:12.04:0,12,182	0/1:92,5:94:99:115,0,849	0/0:22,0:20:9.59:0,10,71	0/0:14,0:13:3:0,3,25	0/0:33,0:26:3.48:0,3,36	0/1:33,2:30:47.24:47,0,143	0/0:27,0:25:18.37:0,18,347	0/1:10,1:10:11.68:12,0,218	1/1:8,1:9:1.42:31,1,0
chr10	72921566	.	GT	G	225.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.603;DP=740;FS=13.225;HRun=1;HaplotypeScore=95.3618;InbreedingCoeff=0.9722;MQ=59.66;MQ0=9;MQRankSum=-1.028;QD=7.26;ReadPosRankSum=2.713;VQSLOD=-0.4413;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,24:31:44.59:320,45,0	0/0:8,0:8:21.03:0,21,308	0/0:50,0:23:66.22:0,66,1002	0/0:35,0:21:17.94:0,18,588	0/0:24,0:24:69.22:0,69,1072	0/0:20,0:20:60.20:0,60,951	0/0:18,0:18:54.18:0,54,863	0/0:38,0:38:99:0,111,1754	0/0:27,0:27:78.23:0,78,1191	0/0:24,0:24:72.25:0,72,1151	0/0:14,0:14:39.13:0,39,624	0/0:28,0:28:62.71:0,63,962	0/0:15,0:15:35.15:0,35,533	0/0:29,0:29:87.28:0,87,1367	0/0:19,0:19:54.17:0,54,833	0/0:14,0:14:39.09:0,39,595	0/0:31,0:31:93.32:0,93,1478	0/0:34,0:34:87.30:0,87,1389	0/0:25,0:25:59.37:0,59,987	0/0:13,0:13:39.13:0,39,606	0/0:93,0:93:99:0,271,4266	0/0:15,0:15:26.82:0,27,431	0/0:11,0:11:15.63:0,16,202	0/0:42,0:41:77.66:0,78,1240	0/0:25,0:24:72.19:0,72,1073	0/0:31,0:30:84.29:0,84,1343	0/0:16,0:16:48.16:0,48,760	0/0:9,0:9:27.09:0,27,431
chr10	72921568	.	CT	C	225.73	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.476;DP=753;FS=13.193;HRun=1;HaplotypeScore=98.7448;InbreedingCoeff=0.9727;MQ=59.27;MQ0=9;MQRankSum=-0.844;QD=7.52;ReadPosRankSum=2.911;VQSLOD=-0.3775;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,24:30:44.60:321,45,0	0/0:8,0:8:21.06:0,21,312	0/0:56,0:25:72.23:0,72,1027	0/0:38,0:22:18.13:0,18,603	0/0:23,0:23:66.22:0,66,1025	0/0:21,0:21:63.17:0,63,957	0/0:20,0:20:60.19:0,60,905	0/0:36,0:36:99:0,105,1617	0/0:26,0:26:75.26:0,75,1199	0/0:25,0:25:72.25:0,72,1144	0/0:14,0:14:42.14:0,42,669	0/0:28,0:28:61.74:0,62,917	0/0:16,0:16:40.14:0,40,529	0/0:31,0:31:93.30:0,93,1460	0/0:20,0:20:57.16:0,57,850	0/0:14,0:14:39.13:0,39,615	0/0:32,0:32:96.31:0,96,1490	0/0:35,0:35:87.28:0,87,1342	0/0:26,0:25:65.37:0,65,1005	0/0:14,0:14:42.14:0,42,647	0/0:94,0:94:99:0,274,4242	0/0:15,0:15:26.82:0,27,431	0/0:10,0:10:15.63:0,16,202	0/0:42,0:41:76.69:0,77,1174	0/0:23,0:22:66.21:0,66,1027	0/0:32,0:31:90.31:0,90,1402	0/0:15,0:15:45.14:0,45,695	0/0:9,0:9:27.09:0,27,417
chr10	72921615	.	C	CGTGTGTGCGT	2946.59	PASS	AB=0.849;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.043;DP=740;FS=1.444;HRun=0;HaplotypeScore=207.4870;InbreedingCoeff=0.7426;MQ=55.36;MQ0=3;MQRankSum=-7.991;QD=11.08;ReadPosRankSum=-2.537;VQSLOD=2.0228;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,13:40:12.02:245,12,0	0/0:12,0:12:36.08:0,36,948	0/1:31,0:14:0.75:1,0,131	0/1:28,0:14:29.10:29,0,225	0/0:18,0:18:36.07:0,36,951	0/0:20,0:20:48.10:0,48,1313	0/0:29,0:29:57.09:0,57,1405	0/0:25,0:24:54.13:0,54,1352	0/0:18,0:18:51.04:0,51,1295	0/0:28,0:28:66.21:0,66,1770	0/0:11,0:11:24.08:0,24,719	1/1:11,26:38:15.05:697,15,0	1/1:3,17:24:21.03:869,21,0	0/0:35,0:35:81.16:0,81,2053	0/0:18,0:18:48.16:0,48,1399	0/0:14,0:14:17.74:0,18,708	0/0:35,0:35:93.14:0,93,2507	1/1:5,14:20:24.08:1095,24,0	0/0:22,0:22:35.91:0,36,673	0/0:15,0:15:36.12:0,36,995	0/0:81,0:81:99:0,184,5175	1/1:3,21:28:2.93:89,3,0	0/1:3,9:17:0:0,0,0	1/1:13,21:38:3.01:92,3,0	0/0:25,0:25:66.16:0,66,1657	0/0:40,0:40:99:0,99,2453	0/0:10,0:10:21.07:0,21,595	0/0:18,0:18:50.20:0,50,1431
chr10	72922367	.	G	GTGTC	426.36	PASS	AB=0.778;AC=2;AF=0.036;AN=56;BaseQRankSum=0.013;DP=615;FS=1.143;HRun=0;HaplotypeScore=103.3946;InbreedingCoeff=0.1479;MQ=53.98;MQ0=16;MQRankSum=1.682;QD=6.99;ReadPosRankSum=2.100;VQSLOD=2.1848;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,32:40:5.29:453,0,5	0/0:9,0:9:14.74:0,15,123	0/0:33,0:11:20.87:0,21,164	0/0:26,0:10:14.62:0,15,126	0/0:26,0:26:50.01:0,50,524	0/0:18,0:17:38.98:0,39,413	0/0:25,0:25:60.02:0,60,678	0/0:21,0:20:58.58:0,59,431	0/0:20,0:20:48.33:0,48,563	0/0:23,0:23:39.29:0,39,426	0/0:15,0:15:21.44:0,21,202	0/0:20,0:19:32.76:0,33,252	0/0:11,0:11:11.53:0,12,88	0/0:28,0:28:53.54:0,54,433	0/0:22,0:22:56.91:0,57,635	0/0:18,0:18:47.87:0,48,501	0/0:36,0:36:62.51:0,63,665	0/0:20,0:19:51.34:0,51,567	0/0:21,0:21:54.83:0,55,527	0/0:17,0:17:35.96:0,36,336	0/0:34,0:31:53.47:0,53,460	0/0:20,0:16:14.77:0,15,115	0/0:16,0:16:13.02:0,13,102	0/1:21,0:21:61.98:62,0,77	0/0:14,0:14:22.74:0,23,176	0/0:34,0:31:75.16:0,75,745	0/0:14,0:14:32.05:0,32,274	0/0:13,0:13:31.17:0,31,280
chr10	72923822	.	GATAT	G	392.22	PASS	AB=1.000;AC=5;AF=0.192;AN=26;BaseQRankSum=1.762;DP=168;FS=12.092;HRun=0;HaplotypeScore=32.4857;InbreedingCoeff=0.4203;MQ=79.54;MQ0=1;MQRankSum=-0.335;QD=8.35;ReadPosRankSum=3.750;VQSLOD=0.2127;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:8.59:9,0,156	./.	0/0:8,0:5:0:0,0,0	0/0:14,0:7:0.47:0,0,2	./.	0/0:5,0:5:6.02:0,6,125	./.	0/0:26,0:25:36.07:0,36,647	0/0:4,0:4:2.99:0,3,23	1/1:5,0:5:3:25,3,0	./.	./.	./.	0/0:3,0:3:6:0,6,89	./.	0/0:2,0:2:6.02:0,6,144	1/1:13,13:30:23.56:455,24,0	0/0:14,0:14:11.98:0,12,164	./.	./.	./.	./.	./.	./.	0/0:4,0:6:5.74:0,6,37	./.	./.	0/0:5,0:10:20.99:0,21,341
chr10	72925416	.	GT	G	627.47	PASS	AB=0.914;AC=7;AF=0.125;AN=56;BaseQRankSum=6.828;DP=522;FS=0.567;HRun=12;HaplotypeScore=56.3071;InbreedingCoeff=0.4862;MQ=76.17;MQ0=2;MQRankSum=0.110;QD=5.55;ReadPosRankSum=0.782;VQSLOD=1.4928;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,24:33:56.74:441,57,0	0/0:6,0:6:18.02:0,18,172	0/1:24,0:21:15.62:16,0,84	0/0:18,0:18:14.33:0,14,93	0/0:18,1:19:27.88:0,28,455	0/0:29,1:31:51.72:0,52,679	0/0:20,0:20:47.97:0,48,464	0/0:27,0:27:54.08:0,54,533	0/0:15,0:15:36.05:0,36,353	0/0:29,0:29:78.13:0,78,773	0/0:10,2:12:0.82:0,1,190	0/1:15,2:17:1.41:1,0,339	0/0:19,0:20:50.92:0,51,495	0/0:14,1:15:12.83:0,13,306	0/0:17,1:18:18.85:0,19,373	0/0:10,0:10:30.06:0,30,304	0/0:27,1:28:51.86:0,52,689	1/1:6,19:26:24.22:288,24,0	0/0:20,0:21:27.93:0,28,364	0/1:9,2:11:16.10:16,0,186	0/0:14,0:14:33.02:0,33,319	0/0:7,0:8:17.86:0,18,160	0/0:21,0:22:56.93:0,57,555	0/0:12,0:14:30.74:0,31,334	0/0:4,0:4:9.02:0,9,91	0/0:25,0:25:69.12:0,69,690	0/0:18,0:17:48.06:0,48,471	0/0:12,0:13:32.86:0,33,303
chr10	72926419	.	AAGAGAGAGAGAGAGAG	A	953.73	PASS	AB=0.773;AC=9;AF=0.173;AN=52;BaseQRankSum=5.280;DP=439;FS=16.639;HRun=0;HaplotypeScore=163.6804;InbreedingCoeff=0.6182;MQ=62.22;MQ0=10;MQRankSum=-3.913;QD=10.04;ReadPosRankSum=0.945;VQSLOD=1.9791;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:30:6.02:192,6,0	0/0:6,0:7:9.03:0,9,289	./.	0/0:20,0:8:1.36:0,1,3	0/0:16,0:22:18.06:0,18,943	0/0:14,0:14:21.07:0,21,1081	0/0:12,0:11:15.05:0,15,968	0/0:17,0:17:15.05:0,15,535	0/0:13,0:13:13.59:0,14,731	0/0:8,0:8:9.02:0,9,201	0/0:10,0:10:9.02:0,9,210	1/1:8,0:8:3.01:53,3,0	1/1:7,11:19:14.25:621,14,0	0/0:21,0:21:30.10:0,30,1703	0/0:16,0:15:12.04:0,12,765	0/0:18,0:19:30.10:0,30,1957	0/0:9,0:19:18.04:0,18,500	0/0:20,0:20:29.28:0,29,748	0/0:14,0:14:20.23:0,20,635	0/0:14,0:14:12.51:0,13,636	0/0:13,0:13:15.05:0,15,793	1/1:9,11:20:2.99:131,3,0	0/1:12,0:16:11.16:91,0,11	./.	0/0:14,0:14:15.05:0,15,655	0/0:15,0:14:18.06:0,18,1042	0/0:16,0:24:21.48:0,21,848	0/0:5,0:4:6.02:0,6,356
chr10	72929380	.	GGTCCCC	G	409.38	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=5.076;DP=341;FS=14.273;HRun=0;HaplotypeScore=77.2273;InbreedingCoeff=0.9443;MQ=45.31;MQ0=15;MQRankSum=-3.647;QD=37.22;ReadPosRankSum=1.548;VQSLOD=2.1621;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:9:27.09:503,27,0	0/0:7,0:7:21.07:0,21,681	./.	./.	0/0:20,0:19:45.15:0,45,1615	0/0:16,0:16:42.14:0,42,1560	0/0:17,0:15:39.13:0,39,1316	0/0:25,0:25:72.25:0,72,2508	0/0:12,0:12:30.10:0,30,1082	0/0:13,0:12:36.12:0,36,1216	0/0:11,0:11:33.11:0,33,1179	0/0:11,0:11:33.10:0,33,1070	0/0:6,0:6:15.05:0,15,564	0/0:7,0:7:18.06:0,18,643	0/0:7,0:7:18.06:0,18,677	0/0:13,0:13:33.11:0,33,1223	0/0:17,0:15:42.13:0,42,1305	0/0:12,0:10:30.03:0,30,936	0/0:14,0:12:36.12:0,36,1323	0/0:22,0:21:60.21:0,60,2252	0/0:10,0:9:27.09:0,27,968	0/0:8,0:8:24.07:0,24,816	0/0:16,0:15:42.14:0,42,1544	0/0:13,0:11:30.10:0,30,1096	0/0:13,0:13:39.13:0,39,1367	0/0:19,0:19:57.15:0,57,1908	0/0:11,0:11:33.11:0,33,1118	0/0:10,0:6:15.05:0,15,557
chr10	72929387	.	AGCTCCG	A	411.22	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=5.063;DP=325;FS=14.021;HRun=0;HaplotypeScore=69.9658;InbreedingCoeff=0.9263;MQ=43.70;MQ0=16;MQRankSum=-4.374;QD=37.38;ReadPosRankSum=2.297;VQSLOD=2.3899;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:9:27.09:505,27,0	0/0:6,0:6:18.06:0,18,612	./.	./.	0/0:21,0:20:42.13:0,42,1475	0/0:16,0:16:42.13:0,42,1428	0/0:14,0:12:30.10:0,30,1078	0/0:23,0:23:66.14:0,66,1995	0/0:11,0:11:27.09:0,27,957	0/0:11,0:10:30.10:0,30,1030	0/0:10,0:10:30.10:0,30,1079	0/0:10,0:10:30.10:0,30,1003	0/0:7,0:7:15.05:0,15,501	0/0:6,0:6:15.05:0,15,537	0/0:7,0:7:18.05:0,18,569	0/0:14,0:14:35.91:0,36,1201	0/0:14,0:12:30.04:0,30,1063	0/0:10,0:8:24.04:0,24,701	0/0:15,0:13:39.13:0,39,1398	0/0:23,0:22:60.20:0,60,2102	0/0:9,0:8:24.08:0,24,812	0/0:9,0:9:21.07:0,21,741	0/0:15,0:14:39.13:0,39,1354	0/0:14,0:12:30.10:0,30,1061	0/0:13,0:13:39.13:0,39,1366	0/0:16,0:16:45.14:0,45,1547	0/0:8,0:8:24.08:0,24,862	0/0:10,0:6:15.05:0,15,502
chr10	72929880	.	A	AT	539.49	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-2.577;DP=549;FS=0.000;HRun=7;HaplotypeScore=50.6260;InbreedingCoeff=0.6988;MQ=67.68;MQ0=0;MQRankSum=-0.592;QD=17.98;ReadPosRankSum=0.372;VQSLOD=3.0275;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:54.12:634,54,0	0/0:9,0:9:21.02:0,21,197	0/1:10,0:8:0.26:0,0,64	0/0:6,0:6:4.46:0,4,19	0/0:31,0:31:93.13:0,93,891	0/0:22,0:22:63.06:0,63,594	0/0:14,0:14:36.06:0,36,347	0/0:25,0:25:54.03:0,54,499	0/0:17,0:17:51.03:0,51,473	0/0:26,0:26:75:0,75,696	0/0:24,0:24:63.06:0,63,595	0/0:16,0:16:48.05:0,48,450	0/0:16,0:16:48.05:0,48,451	0/0:9,0:9:24.01:0,24,222	0/0:20,0:20:48.05:0,48,458	0/0:16,0:16:47.96:0,48,425	0/0:35,0:35:96.09:0,96,905	0/0:29,0:29:81.06:0,81,762	0/0:24,0:24:66.03:0,66,607	0/0:24,0:24:57.03:0,57,537	0/0:7,0:7:18.03:0,18,174	0/0:15,0:15:42.03:0,42,391	0/0:20,0:20:54.05:0,54,507	0/0:23,0:23:60.02:0,60,563	0/0:19,0:19:51.05:0,51,485	0/0:31,0:31:83.97:0,84,778	0/0:32,0:32:86:0,86,800	0/0:9,0:9:24.03:0,24,232
chr10	72930632	.	T	TA	973.44	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=1.610;DP=357;FS=1.535;HRun=6;HaplotypeScore=39.7366;InbreedingCoeff=0.7762;MQ=81.04;MQ0=0;MQRankSum=0.811;QD=28.63;ReadPosRankSum=-0.112;VQSLOD=3.5770;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:45.14:566,45,0	0/0:9,0:9:21.05:0,21,214	0/0:14,0:7:7.56:0,8,78	0/0:21,1:14:4.30:0,4,86	0/0:16,0:16:39.09:0,39,397	0/0:12,0:12:36.08:0,36,367	0/0:9,0:9:24.05:0,24,245	0/0:32,0:32:69.14:0,69,704	0/0:4,0:4:9.02:0,9,92	0/0:11,0:11:24.05:0,24,245	0/0:21,0:21:54.12:0,54,551	0/0:8,0:8:24.05:0,24,244	./.	0/0:7,0:7:15.03:0,15,153	0/0:9,0:9:27.06:0,27,275	0/0:3,0:3:6.01:0,6,61	0/0:18,0:18:51.11:0,51,520	1/1:2,15:17:41.75:527,42,0	0/0:16,0:16:45.08:0,45,448	0/0:13,0:13:27.06:0,27,275	0/0:7,0:7:21.05:0,21,214	0/0:3,0:3:9.01:0,9,85	0/0:11,0:11:27.06:0,27,275	0/0:3,0:3:9.02:0,9,92	0/0:15,0:15:39.06:0,39,390	0/0:15,0:15:42.09:0,42,428	0/0:18,0:18:54.12:0,54,551	0/0:26,0:26:78.18:0,78,796
chr10	72930950	.	C	CTCCTCCTCT	4036.48	PASS	AB=0.909;AC=10;AF=0.179;AN=56;BaseQRankSum=-1.476;DP=569;FS=5.540;HRun=0;HaplotypeScore=148.9251;InbreedingCoeff=0.7036;MQ=60.83;MQ0=12;MQRankSum=-6.119;QD=41.61;ReadPosRankSum=0.064;VQSLOD=2.7770;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:4.23:0,4,1607	0/0:7,0:7:21.01:0,21,462	0/0:27,0:10:16.53:0,17,236	0/0:18,0:8:9.70:0,10,279	0/0:20,0:20:51.11:0,51,1132	0/0:22,0:22:60.11:0,60,1506	0/0:20,0:20:51.12:0,51,1183	0/0:30,0:28:59.99:0,60,821	0/0:15,0:15:45.14:0,45,1262	0/0:23,0:23:60.20:0,60,1619	0/0:24,0:24:65.97:0,66,1429	1/1:3,8:14:15.05:694,15,0	1/1:2,14:24:21.07:988,21,0	0/0:19,0:19:42.12:0,42,1049	0/0:19,0:19:57.12:0,57,1420	0/0:19,0:18:42.09:0,42,1000	0/0:26,0:24:27.51:0,28,1150	0/1:10,0:10:36.53:312,0,37	0/0:19,0:19:48.02:0,48,847	0/0:20,0:19:48.12:0,48,1103	0/0:25,0:25:63.14:0,63,1376	1/1:0,15:19:29.61:550,30,0	1/1:3,8:12:8.91:220,9,0	0/1:14,4:18:11.80:1273,0,12	0/0:20,0:20:54.08:0,54,1251	0/0:28,0:26:72.18:0,72,1658	0/0:23,0:23:66.15:0,66,1619	0/0:14,0:14:36.05:0,36,862
chr10	72931055	.	T	TCTGGC	657.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.943;DP=515;FS=0.000;HRun=0;HaplotypeScore=98.6567;InbreedingCoeff=0.9015;MQ=69.81;MQ0=0;MQRankSum=-4.706;QD=73.06;ReadPosRankSum=0.509;VQSLOD=5.1797;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.32:0,93,1983	0/0:10,0:10:27.08:0,27,536	0/0:20,0:20:57.16:0,57,1138	0/0:19,0:19:49.98:0,50,955	0/0:10,0:10:27.08:0,27,519	0/0:17,0:17:48.16:0,48,984	0/0:26,0:26:63.19:0,63,1234	0/0:21,0:21:57.20:0,57,1181	0/0:20,0:20:57.20:0,57,1215	0/0:18,0:18:54.19:0,54,1151	0/0:17,0:17:51.18:0,51,1077	0/0:17,0:17:51.18:0,51,1087	0/0:16,0:16:48.15:0,48,982	0/0:30,0:30:81.26:0,81,1687	0/0:15,0:15:39.13:0,39,832	0/0:22,0:22:66.23:0,66,1406	0/0:20,0:20:57.20:0,57,1215	1/1:1,8:9:24.08:751,24,0	0/0:19,0:19:57.20:0,57,1210	0/0:13,0:13:39.12:0,39,776	0/0:22,0:22:66.23:0,66,1392	0/0:19,0:19:54.19:0,54,1150	0/0:16,0:16:48.15:0,48,984	0/0:32,0:32:78.27:0,78,1643	0/0:17,0:17:48.14:0,48,982	0/0:19,0:19:51.17:0,51,1050	0/0:15,0:15:45.14:0,45,919	0/0:2,0:2:6.02:0,6,128
chr10	72935137	.	AATAC	A	2762.18	PASS	AB=0.944;AC=13;AF=0.250;AN=52;BaseQRankSum=8.715;DP=779;FS=18.109;HRun=0;HaplotypeScore=125.8690;InbreedingCoeff=0.8586;MQ=69.76;MQ0=4;MQRankSum=0.324;QD=14.46;ReadPosRankSum=0.326;VQSLOD=2.3528;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,16:43:27.09:418,27,0	0/1:16,1:17:22.30:22,0,463	./.	./.	0/0:25,0:25:45.14:0,45,1008	0/0:25,0:25:11.17:0,11,689	0/0:24,0:25:21.05:0,21,420	0/0:47,0:47:17.90:0,18,191	0/0:41,1:42:16.83:0,17,1319	0/0:29,0:29:36.12:0,36,827	0/0:21,0:21:36.11:0,36,799	1/1:12,28:40:45.15:696,45,0	1/1:4,13:18:39.13:585,39,0	0/0:28,0:28:45.14:0,45,1005	0/0:46,0:46:46.92:0,47,1967	0/0:35,0:35:66.21:0,66,1489	0/0:8,0:17:12.04:0,12,209	0/0:24,1:25:10.58:0,11,933	0/0:24,0:23:12.04:0,12,276	0/0:11,0:27:48.14:0,48,781	0/0:30,0:30:51.16:0,51,1116	1/1:13,7:20:14.84:232,15,0	1/1:9,16:25:35.92:530,36,0	1/1:15,13:28:30.10:464,30,0	0/0:30,0:31:45.14:0,45,947	0/0:41,0:41:66.22:0,66,1432	0/0:22,0:22:39.12:0,39,841	0/0:9,0:9:12.04:0,12,282
chr10	72935322	.	A	ACCTT	7539.46	PASS	AB=0.600;AC=27;AF=0.500;AN=54;BaseQRankSum=-3.787;DP=687;FS=27.364;HRun=0;HaplotypeScore=111.3702;InbreedingCoeff=0.8413;MQ=66.37;MQ0=4;MQRankSum=-0.097;QD=22.57;ReadPosRankSum=-3.081;VQSLOD=2.4837;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:21:9.01:0,9,84	0/0:15,0:15:30.06:0,30,400	0/0:17,0:12:0:0,0,0	./.	1/1:13,11:24:33.03:707,33,0	0/0:28,0:30:55.91:0,56,748	0/0:27,0:27:21:0,21,232	0/0:32,0:32:5.96:0,6,51	1/1:12,10:22:24.08:563,24,0	0/0:32,0:32:48.12:0,48,631	0/0:26,0:26:48.10:0,48,622	1/1:11,1:25:21.07:336,21,0	1/1:11,0:22:36.12:614,36,0	0/0:19,0:19:21.06:0,21,302	0/0:41,0:41:75.25:0,75,1153	0/0:21,0:21:39.09:0,39,503	0/0:34,0:34:48.09:0,48,649	1/1:17,0:17:18.06:327,18,0	1/1:17,11:26:36.11:742,36,0	1/1:16,15:32:48.10:1012,48,0	1/1:13,6:19:6.02:141,6,0	1/1:10,13:23:38.88:735,39,0	1/1:13,0:22:21.54:349,22,0	1/1:21,0:23:6.60:61,7,0	0/0:29,0:29:57.16:0,57,799	1/1:18,17:36:12.43:1131,12,0	0/1:7,14:21:20.20:399,0,20	1/1:8,11:20:18.06:422,18,0
chr10	72935327	.	C	CCTTT	4316.64	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=12.169;DP=659;FS=28.887;HRun=0;HaplotypeScore=116.3010;InbreedingCoeff=-0.1562;MQ=65.75;MQ0=8;MQRankSum=-0.620;QD=14.39;ReadPosRankSum=4.242;VQSLOD=2.8803;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:35.87:0,36,310	0/0:13,0:13:39.10:0,39,617	0/0:17,0:11:20.19:0,20,187	0/0:9,0:8:7.32:0,7,120	0/1:24,0:24:99:382,0,164	0/0:29,0:29:81.14:0,81,1206	0/0:23,0:23:66.01:0,66,743	0/0:27,0:27:77.96:0,78,734	0/1:19,0:19:99:318,0,161	0/0:32,0:32:84.05:0,84,1210	0/0:25,0:25:75.12:0,75,1104	0/1:25,0:25:99:157,0,143	0/1:21,0:21:52.87:347,0,53	0/0:22,0:22:63.07:0,63,747	0/0:39,0:39:99:0,117,1779	0/0:19,0:19:57.14:0,57,871	0/0:33,0:33:90.06:0,90,1224	1/1:0,17:17:18.06:485,18,0	0/1:28,0:23:99:356,0,196	0/1:31,0:31:99:578,0,203	0/1:16,0:16:50.74:51,0,212	0/1:23,0:23:99:386,0,184	0/1:22,0:22:99:183,0,232	0/0:21,0:21:9.26:0,9,281	0/0:29,0:29:84.19:0,84,1294	0/1:33,0:33:99:613,0,349	0/1:22,0:22:99:235,0,144	0/1:19,0:19:99:227,0,132
chr10	72938075	.	AC	A	609.41	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.663;DP=653;FS=7.486;HRun=6;HaplotypeScore=70.8960;InbreedingCoeff=0.8062;MQ=73.10;MQ0=1;MQRankSum=0.184;QD=27.70;ReadPosRankSum=0.758;VQSLOD=4.1711;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,111,1443	0/0:13,0:13:33.10:0,33,418	0/0:31,0:26:39.71:0,40,692	0/0:28,0:22:0.80:0,1,385	0/0:30,0:30:81.26:0,81,1064	0/0:17,0:17:48.14:0,48,616	0/0:26,0:26:75.23:0,75,964	0/0:22,0:22:54.12:0,54,666	0/0:12,0:12:36.12:0,36,468	0/0:27,0:27:75.22:0,75,959	0/0:23,0:23:66.21:0,66,867	0/0:30,0:30:78.24:0,78,1016	0/0:30,0:30:78.25:0,78,1013	0/0:23,0:23:60.20:0,60,789	0/0:20,0:20:60.19:0,60,782	0/0:16,0:16:48.12:0,48,601	0/0:26,0:26:75.23:0,75,973	1/1:0,22:22:66.16:704,66,0	0/0:24,0:24:69.21:0,69,889	0/0:24,0:24:63.19:0,63,802	0/0:19,0:19:54.15:0,54,691	0/0:22,0:22:63.20:0,63,823	0/0:18,0:18:54.16:0,54,694	0/0:33,0:33:93.29:0,93,1210	0/0:15,0:15:45.15:0,45,591	0/0:21,0:21:54.18:0,54,710	0/0:23,0:23:66.19:0,66,850	0/0:17,0:17:45.13:0,45,577
chr10	72939465	.	CCTCTCTCTT	C	376.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.520;DP=507;FS=11.465;HRun=0;HaplotypeScore=138.2365;InbreedingCoeff=0.9347;MQ=81.89;MQ0=0;MQRankSum=-3.666;QD=41.87;ReadPosRankSum=0.914;VQSLOD=3.0417;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,5109	0/0:4,0:4:12.04:0,12,589	0/0:20,0:19:57.19:0,57,2440	0/0:17,0:17:42.61:0,43,1445	0/0:19,0:19:54.17:0,54,2397	0/0:22,0:22:63.22:0,63,3080	0/0:31,0:31:87.25:0,87,3720	0/0:33,0:33:93.31:0,93,4280	0/0:16,0:16:45.13:0,45,2065	0/0:11,0:11:30.10:0,30,1460	0/0:14,0:14:39.13:0,39,1910	0/0:23,0:23:63.22:0,63,2879	0/0:19,0:19:51.16:0,51,2324	0/0:14,0:14:42.14:0,42,2022	0/0:24,0:23:66.21:0,66,3005	0/0:17,0:17:48.12:0,48,1936	0/0:23,0:23:69.24:0,69,3306	1/1:0,9:9:15.05:465,15,0	0/0:22,0:22:66.23:0,66,3060	0/0:7,0:7:21.07:0,21,1030	0/0:24,0:24:72.23:0,72,3343	0/0:16,0:16:43.02:0,43,1938	0/0:5,0:5:15.05:0,15,736	0/0:28,0:28:81.28:0,81,3912	0/0:11,0:11:33.11:0,33,1539	0/0:10,0:10:30.10:0,30,1454	0/0:18,0:18:54.19:0,54,2503	0/0:13,0:13:39.13:0,39,1908
chr10	72943206	.	G	GCT	4734.11	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.093;DP=728;FS=0.000;HRun=0;HaplotypeScore=116.1756;InbreedingCoeff=0.9984;MQ=86.04;MQ0=0;MQRankSum=-1.803;QD=34.06;ReadPosRankSum=2.706;VQSLOD=6.5281;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,111,1376	0/0:7,0:8:20.90:0,21,237	0/0:50,0:37:37.09:0,37,473	0/0:54,0:40:26.16:0,26,398	0/0:25,0:25:63.20:0,63,781	0/0:20,0:20:45.14:0,45,558	0/0:30,0:30:87.27:0,87,1079	0/0:36,0:36:81.25:0,81,994	0/0:23,0:23:54.17:0,54,670	0/0:21,0:22:54:0,54,641	0/0:18,0:18:42.13:0,42,521	1/1:2,28:30:66.23:1083,66,0	1/1:8,28:36:46.92:1280,47,0	0/0:23,0:23:48.15:0,48,595	0/0:25,0:25:66.19:0,66,806	0/0:24,0:24:63.19:0,63,769	0/0:34,0:34:93.28:0,93,1139	1/1:10,14:25:45.14:715,45,0	0/0:19,0:19:42.11:0,42,507	0/0:17,0:17:45.12:0,45,533	0/0:28,0:28:81.25:0,81,1004	1/1:3,8:11:24.02:394,24,0	1/1:2,12:14:36.12:574,36,0	1/1:7,14:23:42.14:689,42,0	0/0:23,0:23:57.18:0,57,707	0/0:24,0:24:57.18:0,57,707	0/0:19,0:19:51.15:0,51,619	0/0:20,0:20:42.13:0,42,521
chr10	72944808	.	GA	G	3842.24	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.002;DP=712;FS=4.944;HRun=7;HaplotypeScore=81.0798;InbreedingCoeff=0.9966;MQ=77.90;MQ0=0;MQRankSum=0.463;QD=25.79;ReadPosRankSum=3.632;VQSLOD=4.3457;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,138,1718	0/0:5,0:5:15.05:0,15,188	0/0:23,0:23:45.90:0,46,518	0/0:18,0:17:32.64:0,33,334	0/0:34,0:34:99:0,99,1176	0/0:36,0:36:93.21:0,93,1134	0/0:30,0:30:78.24:0,78,969	0/0:25,0:25:69.19:0,69,822	0/0:24,0:24:60.18:0,60,742	0/0:23,0:23:66.20:0,66,810	0/0:25,0:25:72.22:0,72,889	1/1:2,34:36:87.19:886,87,0	1/1:1,22:23:57.13:581,57,0	0/0:34,0:34:87.20:0,87,1034	0/0:30,0:30:84.23:0,84,1016	0/0:18,0:18:54.16:0,54,665	0/0:24,0:24:69.22:0,69,865	1/1:1,10:11:30.07:306,30,0	0/0:16,0:16:42.12:0,42,505	0/0:25,0:25:63.18:0,63,768	0/0:40,0:40:99:0,99,1243	1/1:0,25:25:72.15:729,72,0	1/1:0,22:22:50.26:496,50,0	1/1:1,31:32:84.13:844,84,0	0/0:21,0:21:54.16:0,54,667	0/0:23,0:23:57.16:0,57,694	0/0:25,0:25:69.20:0,69,843	0/0:13,0:13:39.12:0,39,491
chr10	72945301	.	C	CTGTCCCAG	9386.72	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-5.779;DP=680;FS=0.443;HRun=0;HaplotypeScore=178.7997;InbreedingCoeff=0.9925;MQ=85.06;MQ0=0;MQRankSum=-13.351;QD=85.33;ReadPosRankSum=-0.655;VQSLOD=5.0539;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:93.32:0,93,2539	0/0:4,0:4:12.04:0,12,333	0/0:28,0:28:66.22:0,66,1772	0/0:32,0:32:46.87:0,47,1520	0/0:24,0:24:65.82:0,66,1757	0/0:20,0:20:57.18:0,57,1499	0/0:22,0:22:57.18:0,57,1489	0/0:37,0:37:99:0,102,2462	0/0:34,0:34:90.31:0,90,2441	0/0:21,0:21:57.20:0,57,1552	0/0:16,0:16:45.14:0,45,1110	1/1:7,17:27:66.22:2608,66,0	1/1:6,10:20:42.14:1748,42,0	0/0:22,0:22:66.23:0,66,1787	0/0:26,0:26:75.24:0,75,1982	0/0:23,0:23:66.21:0,66,1738	0/0:37,0:37:99:0,108,2934	0/0:20,0:20:51.18:0,51,1405	0/0:17,0:17:45.15:0,45,1207	0/0:25,0:25:63.22:0,63,1690	0/0:31,0:31:87.30:0,87,2312	1/1:7,19:30:63.21:2606,63,0	1/1:2,9:12:30.10:1250,30,0	1/1:4,13:21:27.09:1175,27,0	0/0:19,0:19:54.19:0,54,1429	0/0:24,0:24:69.24:0,69,1856	0/0:36,0:36:99:0,105,2793	0/0:17,0:17:51.17:0,51,1344
chr10	72948462	.	GTTCA	G	3021.18	PASS	AB=0.918;AC=12;AF=0.214;AN=56;BaseQRankSum=11.069;DP=652;FS=0.966;HRun=0;HaplotypeScore=110.4204;InbreedingCoeff=0.7264;MQ=70.14;MQ0=1;MQRankSum=2.739;QD=20.41;ReadPosRankSum=1.474;VQSLOD=3.4268;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:27:36.01:328,36,0	0/1:9,1:10:27.23:27,0,413	0/0:22,0:16:9.03:0,9,183	0/0:22,0:17:15.05:0,15,345	0/0:27,0:27:63.68:0,64,1395	0/0:22,0:22:42.14:0,42,1011	0/0:18,0:18:36.11:0,36,795	0/0:42,0:42:27.44:0,27,1462	0/0:10,0:22:27.08:0,27,445	1/1:8,16:24:54.16:844,54,0	1/1:2,12:14:36.12:580,36,0	0/0:29,0:29:69.15:0,69,1520	0/0:27,0:27:57.20:0,57,1332	0/0:21,0:21:45.14:0,45,1029	0/0:22,1:23:5.86:0,6,1132	0/0:29,0:29:63.21:0,63,1453	1/1:9,19:28:48.16:773,48,0	0/0:5,0:21:39.10:0,39,645	0/0:27,0:27:39.11:0,39,829	0/0:29,0:29:60.18:0,60,1325	0/0:21,0:21:48.13:0,48,992	0/0:17,0:17:42.12:0,42,917	0/0:19,0:19:33.11:0,33,796	0/0:27,0:27:69.24:0,69,1614	1/1:4,15:20:39.13:608,39,0	0/1:23,2:25:42.44:42,0,1082	0/0:31,0:31:75.22:0,75,1723	0/0:8,0:8:3.01:0,3,49
chr10	72949074	.	CTTT	C	5249.40	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.018;DP=591;FS=2.418;HRun=3;HaplotypeScore=85.7040;InbreedingCoeff=0.9987;MQ=64.71;MQ0=2;MQRankSum=-0.590;QD=51.46;ReadPosRankSum=2.711;VQSLOD=4.7638;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,2504	0/0:9,0:9:27.09:0,27,667	0/0:20,0:17:46.96:0,47,1079	0/0:20,0:17:48.16:0,48,1156	0/0:21,0:21:63.22:0,63,1553	0/0:14,0:14:42.14:0,42,1003	0/0:24,0:24:72.25:0,72,1773	0/0:41,0:41:99:0,123,3014	0/0:21,0:21:60.21:0,60,1475	0/0:23,0:23:69.24:0,69,1707	0/0:12,0:12:33.11:0,33,820	1/1:0,30:30:90.31:1674,90,0	1/1:1,15:16:42.14:783,42,0	0/0:16,0:16:48.16:0,48,1183	0/0:25,0:25:75.24:0,75,1775	0/0:19,0:19:57.20:0,57,1405	0/0:36,0:36:99:0,105,2539	0/0:20,0:21:63.17:0,63,1452	0/0:19,0:17:51.18:0,51,1257	0/0:15,0:15:45.15:0,45,1110	0/0:34,0:34:99:0,102,2514	1/1:0,15:15:45.15:836,45,0	1/1:0,14:14:42.14:783,42,0	1/1:0,27:27:63.22:1174,63,0	0/0:18,0:18:51.18:0,51,1257	0/0:15,0:15:45.15:0,45,1109	0/0:23,0:23:69.24:0,69,1678	0/0:7,0:7:21.07:0,21,518
chr10	72949187	.	CCTCTGTGTGTGT	C	158.78	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=5.210;DP=516;FS=0.000;HRun=0;HaplotypeScore=149.7520;InbreedingCoeff=0.4180;MQ=69.05;MQ0=10;MQRankSum=-1.242;QD=2.94;ReadPosRankSum=0.140;VQSLOD=2.2482;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:6.48:0,6,105	0/0:5,0:5:12.04:0,12,264	0/0:18,0:12:24.03:0,24,470	0/0:23,0:16:23.01:0,23,445	0/0:17,0:17:45.15:0,45,983	0/0:19,0:19:43.35:0,43,1388	0/0:21,0:20:54.14:0,54,1387	0/0:34,0:32:92.90:0,93,1583	0/0:18,0:18:51.17:0,51,1422	0/0:16,0:16:48.16:0,48,1368	0/0:7,0:7:18.06:0,18,342	0/1:13,0:12:5.32:5,0,44	0/1:15,0:15:7.75:92,0,8	0/0:17,0:17:48.14:0,48,1176	0/0:18,0:18:48.64:0,49,1438	0/0:21,0:21:50.26:0,50,1264	0/0:21,0:21:54.64:0,55,1424	1/1:13,0:13:3.01:74,3,0	0/0:17,0:16:48.09:0,48,877	0/0:8,0:7:18.05:0,18,407	0/0:46,0:45:99:0,102,2460	0/0:6,6:11:7.73:0,8,39	0/1:13,0:12:0.99:93,0,1	0/0:29,0:29:0:0,0,1	0/0:13,0:13:39.13:0,39,906	0/0:22,0:22:65.44:0,65,1584	0/0:11,0:11:30.09:0,30,786	0/0:13,0:13:39.13:0,39,1013
chr10	72949188	.	CTCTG	C	837.87	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=3.500;DP=529;FS=0.000;HRun=0;HaplotypeScore=84.8213;InbreedingCoeff=0.8906;MQ=67.46;MQ0=10;MQRankSum=-1.329;QD=8.30;ReadPosRankSum=0.847;VQSLOD=2.2705;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,33:36:5.93:75,6,0	0/0:5,0:5:11.99:0,12,100	0/0:18,0:12:29.10:0,29,289	0/0:22,0:15:30.76:0,31,262	0/0:17,0:17:44.93:0,45,408	0/0:21,0:21:39.47:0,39,511	0/0:23,0:22:50.94:0,51,554	0/0:35,0:33:87.07:0,87,760	0/0:20,0:20:50.72:0,51,605	0/0:16,0:16:48.09:0,48,518	0/0:8,0:8:17.78:0,18,138	1/1:13,0:12:23.94:193,24,0	1/1:13,0:15:41.60:325,42,0	0/0:17,0:17:41.94:0,42,421	0/0:21,0:21:51.47:0,51,632	0/0:21,0:21:45.92:0,46,476	0/0:21,0:21:50.79:0,51,528	1/1:0,0:13:3.01:39,3,0	0/0:18,0:16:19.94:0,20,362	0/0:8,0:7:14.98:0,15,124	0/0:46,0:45:98.89:0,99,996	1/1:12,0:11:11.91:91,12,0	1/1:11,0:11:32.97:286,33,0	0/0:2,0:29:0:0,0,0	0/0:14,0:14:41.99:0,42,480	0/0:22,0:22:64.18:0,64,665	0/0:12,0:12:29.90:0,30,310	0/0:14,0:14:41.88:0,42,428
chr10	72949723	.	A	ATTT	565.63	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.658;DP=550;FS=2.585;HRun=2;HaplotypeScore=89.0126;InbreedingCoeff=0.9885;MQ=78.06;MQ0=0;MQRankSum=-4.585;QD=51.42;ReadPosRankSum=1.682;VQSLOD=3.8490;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.10:0,69,1066	0/0:13,0:13:36.07:0,36,560	0/0:30,0:29:71.40:0,71,1206	0/0:18,0:16:45.15:0,45,765	0/0:16,0:16:48.08:0,48,691	0/0:24,0:24:72.21:0,72,1211	0/0:25,0:25:75.24:0,75,1279	0/0:26,0:26:78.21:0,78,1233	0/0:16,0:16:48.14:0,48,783	0/0:17,0:17:51.17:0,51,896	0/0:14,0:14:42.14:0,42,739	0/0:20,0:20:60.21:0,60,1051	0/0:22,0:22:63.18:0,63,1050	0/0:15,0:15:45.14:0,45,764	0/0:15,0:15:45.15:0,45,793	0/0:20,0:20:57.18:0,57,977	0/0:28,0:28:78.27:0,78,1375	1/1:5,6:11:16.79:655,17,0	0/0:20,0:20:51.10:0,51,775	0/0:23,0:23:66.03:0,66,1068	0/0:25,0:25:72.22:0,72,1223	0/0:25,0:25:66.18:0,66,1075	0/0:12,0:12:36.11:0,36,606	0/0:16,0:16:48.16:0,48,839	0/0:11,0:11:33.11:0,33,570	0/0:20,0:20:57.20:0,57,1005	0/0:32,0:32:93.30:0,93,1610	0/0:12,0:12:36.11:0,36,605
chr10	72949727	.	A	AG	165.33	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.853;DP=542;FS=1.631;HRun=1;HaplotypeScore=64.4937;InbreedingCoeff=0.9924;MQ=75.48;MQ0=0;MQRankSum=-4.735;QD=23.62;ReadPosRankSum=2.234;VQSLOD=3.8055;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.17:0,63,787	0/0:10,0:10:30.10:0,30,389	0/0:28,0:27:75.24:0,75,954	0/0:21,0:18:54.17:0,54,685	0/0:15,0:15:39.13:0,39,505	0/0:24,0:24:72.22:0,72,919	0/0:24,0:24:66.18:0,66,827	0/0:26,0:26:78.25:0,78,1001	0/0:15,0:15:45.15:0,45,584	0/0:17,0:17:48.16:0,48,622	0/0:14,0:14:42.12:0,42,529	0/0:20,0:20:57.19:0,57,740	0/0:22,0:22:66.21:0,66,855	0/0:15,0:15:45.15:0,45,584	0/0:15,0:15:45.15:0,45,584	0/0:19,0:19:57.19:0,57,740	0/0:31,0:31:83.61:0,84,1089	1/1:1,6:7:18.95:256,19,0	0/0:19,0:19:51.16:0,51,649	0/0:22,0:22:66.21:0,66,857	0/0:24,0:24:72.22:0,72,920	0/0:22,0:22:66.21:0,66,857	0/0:13,0:13:39.13:0,39,506	0/0:16,0:16:48.16:0,48,623	0/0:12,0:12:36.12:0,36,467	0/0:20,0:20:60.20:0,60,779	0/0:36,0:36:99:0,105,1348	0/0:12,0:12:36.12:0,36,467
chr10	72949730	.	T	TACTC	424.57	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.828;DP=550;FS=0.000;HRun=0;HaplotypeScore=101.6469;InbreedingCoeff=0.9953;MQ=73.71;MQ0=1;MQRankSum=-4.772;QD=53.07;ReadPosRankSum=1.155;VQSLOD=4.5627;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:59.50:0,60,1193	0/0:11,0:11:33.11:0,33,629	0/0:28,0:26:72.20:0,72,1308	0/0:22,0:19:54.15:0,54,998	0/0:13,0:13:39.13:0,39,769	0/0:22,0:22:66.21:0,66,1283	0/0:22,0:22:63.22:0,63,1258	0/0:27,0:27:81.25:0,81,1530	0/0:17,0:17:51.16:0,51,955	0/0:16,0:16:45.15:0,45,866	0/0:14,0:14:42.13:0,42,785	0/0:20,0:20:60.20:0,60,1164	0/0:22,0:22:63.21:0,63,1224	0/0:16,0:16:48.15:0,48,923	0/0:16,0:16:48.15:0,48,923	0/0:19,0:19:57.18:0,57,1104	0/0:34,0:34:99:0,99,1839	1/1:2,6:8:21.07:517,21,0	0/0:17,0:17:51.16:0,51,956	0/0:24,0:24:66.20:0,66,1231	0/0:25,0:25:66.23:0,66,1314	0/0:23,0:23:66.18:0,66,1277	0/0:15,0:15:42.14:0,42,819	0/0:16,0:16:48.15:0,48,922	0/0:13,0:13:36.12:0,36,719	0/0:20,0:20:60.20:0,60,1165	0/0:36,0:36:99:0,108,2105	0/0:12,0:12:36.12:0,36,719
chr10	72950036	.	AAC	A	3800.79	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.166;DP=574;FS=9.869;HRun=0;HaplotypeScore=77.3893;InbreedingCoeff=0.9989;MQ=88.46;MQ0=0;MQRankSum=-2.492;QD=37.26;ReadPosRankSum=6.061;VQSLOD=5.2376;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.29:0,90,1679	0/0:11,0:11:33.10:0,33,602	0/0:31,0:31:84.70:0,85,1373	0/0:27,0:26:71.86:0,72,1005	0/0:23,0:23:69.22:0,69,1257	0/0:26,0:26:78.21:0,78,1323	0/0:17,0:17:51.16:0,51,928	0/0:29,0:29:80.99:0,81,1317	0/0:22,0:22:66.19:0,66,1205	0/0:22,0:22:66.20:0,66,1181	0/0:20,0:20:60.17:0,60,1074	1/1:0,13:13:36.12:537,36,0	1/1:0,13:13:33.10:492,33,0	0/0:13,0:13:39.13:0,39,751	0/0:17,0:17:51.12:0,51,881	0/0:14,0:14:42.14:0,42,809	0/0:39,0:39:99:0,117,2084	1/1:0,15:15:33.07:468,33,0	0/0:17,0:17:51.11:0,51,838	0/0:18,0:18:54.15:0,54,971	0/0:24,0:24:72.25:0,72,1388	1/1:0,21:21:54.18:805,54,0	1/1:0,15:15:42.10:602,42,0	1/1:0,25:25:59.98:896,60,0	0/0:18,0:18:54.17:0,54,984	0/0:29,0:29:87.26:0,87,1572	0/0:18,0:18:54.14:0,54,939	0/0:7,0:7:20.95:0,21,299
chr10	72950519	.	A	ACAT	1467.85	PASS	AB=0.883;AC=9;AF=0.173;AN=52;BaseQRankSum=-5.034;DP=419;FS=13.214;HRun=0;HaplotypeScore=72.3836;InbreedingCoeff=0.4665;MQ=72.49;MQ0=0;MQRankSum=3.981;QD=14.39;ReadPosRankSum=-2.165;VQSLOD=1.3813;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:9:11.67:12,0,16	0/0:3,0:3:2.98:0,3,22	0/0:22,0:19:8.74:0,9,56	./.	0/0:21,0:21:42.08:0,42,523	0/0:24,0:24:45.13:0,45,582	0/0:11,0:11:15.03:0,15,173	0/0:25,0:25:12.02:0,12,123	0/0:17,0:17:30.07:0,30,359	1/1:10,15:26:48.16:903,48,0	1/1:3,8:11:14.79:159,15,0	0/0:5,0:5:9.03:0,9,111	0/0:6,0:6:5.88:0,6,36	0/0:10,0:10:21.05:0,21,251	0/0:23,0:23:36.01:0,36,401	0/0:16,0:16:27.03:0,27,300	0/1:11,13:24:27.91:162,0,28	0/0:6,0:6:5.94:0,6,40	0/0:13,0:13:21.05:0,21,254	0/0:14,0:14:30.07:0,30,357	0/0:17,0:17:24.03:0,24,260	./.	0/0:9,0:9:12:0,12,139	0/0:4,0:4:3.01:0,3,40	1/1:7,11:19:18.06:348,18,0	0/1:13,0:13:33.88:34,0,242	0/0:23,0:23:39.10:0,39,489	0/0:32,0:32:71.74:0,72,956
chr10	72950566	.	GTAGTAA	G	162.33	PASS	AB=0.918;AC=7;AF=0.125;AN=56;BaseQRankSum=5.032;DP=388;FS=8.037;HRun=0;HaplotypeScore=94.0996;InbreedingCoeff=0.1083;MQ=58.77;MQ0=2;MQRankSum=-5.744;QD=4.16;ReadPosRankSum=-1.604;VQSLOD=0.1628;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:9:14.49:14,0,92	0/0:5,0:5:15.05:0,15,533	0/0:12,0:10:17.30:0,17,374	0/0:10,0:6:9.03:0,9,179	0/0:23,0:23:66.16:0,66,1883	0/0:21,0:21:57.18:0,57,1907	0/0:14,0:14:33.10:0,33,1058	0/0:31,0:31:92.05:0,92,2521	0/0:11,0:11:30.05:0,30,821	0/0:24,0:24:71.27:0,71,1601	0/0:12,0:12:27.01:0,27,839	0/1:3,7:10:45.39:45,0,195	0/1:10,0:10:99:102,0,237	0/0:8,0:8:21.05:0,21,632	0/0:14,0:14:33.10:0,33,1017	0/0:10,0:10:27.04:0,27,681	0/0:20,0:20:36.04:0,36,1191	0/0:11,0:11:15.16:0,15,226	0/0:19,0:18:50.98:0,51,1365	0/0:12,0:12:33.08:0,33,936	0/0:9,0:9:24.07:0,24,755	1/1:1,0:1:3.01:32,3,0	0/1:7,0:7:45.71:46,0,109	0/1:2,0:2:9.97:49,0,10	0/0:23,0:23:53.67:0,54,1808	0/0:16,0:16:45.14:0,45,1401	0/0:17,0:17:40.08:0,40,1371	0/0:27,0:27:72.20:0,72,2082
chr10	72950569	.	GTAA	G	123.20	PASS	AB=0.792;AC=7;AF=0.125;AN=56;BaseQRankSum=2.808;DP=372;FS=0.000;HRun=0;HaplotypeScore=68.9375;InbreedingCoeff=0.2538;MQ=59.01;MQ0=2;MQRankSum=-3.159;QD=4.25;ReadPosRankSum=-1.128;VQSLOD=0.9125;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:10.20:0,10,72	0/0:5,0:5:15.05:0,15,306	0/0:10,0:8:9.03:0,9,157	0/0:9,0:5:3.01:0,3,61	0/0:23,0:23:57.16:0,57,1037	0/0:20,0:20:57.17:0,57,1070	0/0:13,0:13:33.10:0,33,629	0/0:32,0:32:32.45:0,32,1333	0/0:9,0:9:21.07:0,21,426	0/0:21,0:21:1.70:0,2,690	0/0:12,0:12:24.08:0,24,475	0/1:10,0:10:28.37:28,0,78	0/1:4,6:10:86.68:87,0,113	0/0:7,0:7:18.06:0,18,358	0/0:12,0:12:33.10:0,33,612	0/0:8,0:8:18.06:0,18,355	0/0:20,0:20:33.11:0,33,674	0/0:11,0:11:9.43:0,9,78	0/0:18,0:18:39.10:0,39,717	0/0:12,0:12:27.08:0,27,507	0/0:9,0:9:21.07:0,21,417	1/1:0,1:1:3.01:34,3,0	0/1:4,2:6:34.13:59,0,34	1/1:1,1:2:3.01:36,3,0	0/0:23,0:23:10.79:0,11,984	0/0:17,0:17:45.14:0,45,834	0/0:17,0:17:39.13:0,39,776	0/0:25,0:25:57.12:0,57,1010
chr10	72950620	.	TA	T	291.79	PASS	AB=1.000;AC=3;AF=0.056;AN=54;BaseQRankSum=4.934;DP=334;FS=6.227;HRun=8;HaplotypeScore=47.3216;InbreedingCoeff=0.5238;MQ=74.68;MQ0=0;MQRankSum=-3.075;QD=13.26;ReadPosRankSum=0.260;VQSLOD=2.6206;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:39.06:376,39,0	0/0:6,0:6:12.04:0,12,145	0/1:8,0:7:20.10:20,0,53	0/0:11,1:11:11.80:0,12,90	0/0:15,0:15:36.10:0,36,424	0/0:13,0:13:36.11:0,36,434	0/0:15,0:15:42.07:0,42,469	0/0:22,0:22:66.16:0,66,763	0/0:9,0:9:27.08:0,27,326	0/0:9,0:9:24.07:0,24,290	0/0:10,0:10:30.09:0,30,362	0/0:8,0:8:9.03:0,9,109	0/0:10,0:10:18.06:0,18,217	0/0:11,0:11:27.07:0,27,314	0/0:17,0:17:42.12:0,42,496	0/0:11,0:11:27.08:0,27,326	0/0:23,0:23:60.17:0,60,712	0/0:9,0:9:21.04:0,21,239	0/0:13,0:13:30.08:0,30,353	0/0:10,0:10:27.07:0,27,315	0/0:11,0:11:30.09:0,30,362	./.	0/0:2,0:2:3.01:0,3,36	0/0:9,0:9:27:0,27,307	0/0:22,0:22:54.17:0,54,652	0/0:18,0:18:48.15:0,48,580	0/0:16,0:15:45.11:0,45,519	0/0:11,0:11:24.07:0,24,290
chr10	72950644	.	TAC	T	56.07	PASS	AB=0.942;AC=12;AF=0.240;AN=50;BaseQRankSum=3.889;DP=366;FS=16.024;HRun=0;HaplotypeScore=58.7555;InbreedingCoeff=-0.1561;MQ=64.82;MQ0=7;MQRankSum=0.524;QD=0.31;ReadPosRankSum=0.027;VQSLOD=0.0153;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:5.68:28,6,0	0/0:5,0:5:9.03:0,9,136	./.	./.	0/1:14,0:14:18.01:18,0,104	0/1:15,1:16:9.36:9,0,228	0/0:13,0:13:18.06:0,18,272	0/1:14,1:15:21.35:21,0,101	0/0:11,0:11:11.19:0,11,152	0/0:9,0:8:9.91:0,10,120	0/0:13,0:13:18.03:0,18,227	0/0:6,0:6:2.88:0,3,15	0/0:12,0:12:4.25:0,4,33	0/0:10,0:10:15.05:0,15,220	0/1:14,2:16:39.69:40,0,266	0/1:11,2:13:15.33:15,0,205	0/0:21,2:23:8.62:0,9,503	0/0:7,0:9:15:0,15,160	0/1:14,1:14:18.36:18,0,123	0/0:11,0:11:15.04:0,15,203	0/1:19,0:19:6.30:6,0,313	./.	0/0:1,0:1:3.01:0,3,41	0/0:17,0:17:20.54:0,21,124	0/1:18,1:19:0.29:0,0,370	0/1:17,1:18:21.27:21,0,101	0/1:17,1:17:12.32:12,0,230	0/0:11,0:11:21.05:0,21,281
chr10	72950821	.	A	AGGTGGAGGTTAG	5222.33	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=-1.578;DP=304;FS=6.609;HRun=0;HaplotypeScore=109.0102;InbreedingCoeff=0.9254;MQ=93.68;MQ0=0;MQRankSum=-9.060;QD=137.43;ReadPosRankSum=1.402;VQSLOD=5.3539;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,8:15:42.14:2252,42,0	0/0:4,0:4:12.03:0,12,365	0/0:15,0:15:45.11:0,45,1301	0/0:16,0:16:39.13:0,39,1176	0/0:8,0:8:24.08:0,24,898	0/0:11,0:11:33.10:0,33,1153	0/0:10,0:10:27.07:0,27,925	0/0:13,0:13:36.10:0,36,1193	0/0:10,0:10:24.05:0,24,665	0/0:14,0:14:33.06:0,33,1037	0/0:7,0:7:21.07:0,21,790	1/1:2,3:5:15.05:921,15,0	1/1:0,4:5:12.04:737,12,0	0/0:12,0:12:36.11:0,36,1205	0/0:9,0:9:27.09:0,27,972	0/0:10,0:10:27.08:0,27,867	0/0:29,0:29:81.23:0,81,2646	1/1:6,1:7:18.06:945,18,0	0/0:31,0:31:87.28:0,87,3025	0/0:2,0:2:6.02:0,6,226	0/0:8,0:8:18.06:0,18,677	./.	./.	1/1:1,3:4:6.02:368,6,0	0/0:11,0:11:33.11:0,33,1242	0/0:16,0:16:48.16:0,48,1663	0/0:14,0:14:42.14:0,42,1448	0/0:16,0:16:48.16:0,48,1806
chr10	72950857	.	A	AT	771.88	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=4.071;DP=316;FS=20.128;HRun=9;HaplotypeScore=45.9989;InbreedingCoeff=0.8134;MQ=72.74;MQ0=11;MQRankSum=-6.897;QD=17.54;ReadPosRankSum=-2.034;VQSLOD=1.8314;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:39.11:430,39,0	0/0:2,0:2:6:0,6,52	0/0:35,1:10:11.80:0,12,88	0/0:31,0:21:3.99:0,4,117	0/0:5,0:5:15:0,15,130	0/0:9,0:9:26.90:0,27,225	0/0:10,0:10:26.99:0,27,234	0/0:25,0:24:65.93:0,66,563	0/0:8,0:8:24:0,24,208	0/0:9,0:9:24:0,24,208	0/0:4,0:4:12:0,12,104	1/1:1,6:7:18.05:199,18,0	1/1:1,4:5:12.03:133,12,0	0/0:7,0:7:12:0,12,104	0/0:7,0:7:21:0,21,182	0/0:7,0:7:18:0,18,156	0/0:26,0:26:48.68:0,49,544	1/1:3,6:9:12.03:133,12,0	0/0:29,0:29:62.40:0,62,560	0/0:1,0:1:3:0,3,26	0/0:5,0:5:12:0,12,104	./.	./.	1/1:0,2:2:3.48:35,3,0	0/0:12,0:12:32.99:0,33,286	0/0:14,0:14:35.99:0,36,313	0/0:8,0:8:17.99:0,18,156	0/0:15,0:15:32.99:0,33,286
chr10	72950895	.	CT	C	107.38	PASS	AB=0.833;AC=5;AF=0.100;AN=50;BaseQRankSum=3.641;DP=247;FS=3.129;HRun=8;HaplotypeScore=29.2456;InbreedingCoeff=0.4329;MQ=47.43;MQ0=17;MQRankSum=-3.377;QD=5.11;ReadPosRankSum=-0.097;VQSLOD=-0.5914;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:36.07:0,36,418	./.	0/0:9,0:2:3.01:0,3,36	0/0:16,0:7:9:0,9,88	0/0:5,0:5:15.03:0,15,170	0/0:9,0:9:21.02:0,21,237	0/0:9,0:7:17.97:0,18,179	0/0:27,0:26:60.12:0,60,676	0/0:6,0:6:15.05:0,15,181	0/0:6,0:5:12.04:0,12,145	0/0:2,0:2:3.01:0,3,36	1/1:3,1:4:5.75:40,6,0	0/0:1,0:1:2.60:0,3,10	0/0:6,0:5:12.02:0,12,133	0/0:7,0:7:9.02:0,9,102	0/0:2,0:2:6.01:0,6,63	0/0:29,0:29:81.19:0,81,947	1/1:7,5:10:15.02:144,15,0	0/0:28,0:25:54.15:0,54,632	0/0:3,0:2:3.01:0,3,36	0/0:8,0:8:12.04:0,12,145	./.	./.	0/1:4,1:4:18.77:36,0,19	0/0:7,0:7:12.04:0,12,145	0/0:13,0:11:15.05:0,15,181	0/0:3,0:3:9.03:0,9,109	0/0:9,0:8:18.06:0,18,217
chr10	72951141	.	AAAAAGGAAAAAGAAAAAAG	A	807.85	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.523;DP=439;FS=3.543;HRun=0;HaplotypeScore=180.4637;InbreedingCoeff=0.8825;MQ=62.32;MQ0=4;MQRankSum=-4.405;QD=22.44;ReadPosRankSum=0.773;VQSLOD=2.4180;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,28:36:23.99:901,24,0	0/0:6,0:6:18.06:0,18,1538	0/0:36,0:15:41.44:0,41,822	0/0:21,0:9:22.43:0,22,1148	0/0:4,0:4:12.04:0,12,1003	0/0:5,0:5:15.05:0,15,1195	0/0:19,0:19:48.10:0,48,3434	0/0:21,0:21:60.19:0,60,4306	0/0:15,0:15:45.14:0,45,3613	0/0:16,0:16:42.13:0,42,3511	0/0:13,0:13:39.12:0,39,2631	0/0:9,0:9:12.04:0,12,605	0/0:8,0:8:18.06:0,18,748	0/0:13,0:13:39.13:0,39,3327	0/0:12,0:12:33.09:0,33,2522	0/0:6,0:6:18.06:0,18,1597	0/0:34,0:34:99:0,102,7379	0/0:10,0:10:18.53:0,19,1191	0/0:17,0:17:51.18:0,51,3762	0/0:10,0:10:30.10:0,30,2207	0/0:19,0:19:54.18:0,54,4267	0/0:10,0:10:21.07:0,21,1362	0/0:10,0:9:18.06:0,18,625	0/0:18,0:18:27.09:0,27,1347	0/0:12,0:12:30.07:0,30,2366	0/0:28,0:28:78.25:0,78,5931	0/0:24,0:24:69.23:0,69,5632	0/0:7,0:7:21.07:0,21,1634
chr10	72951159	.	AG	A	513	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.203;DP=475;FS=1.589;HRun=1;HaplotypeScore=51.8775;InbreedingCoeff=0.9516;MQ=63.84;MQ0=3;MQRankSum=-4.480;QD=5.40;ReadPosRankSum=-1.645;VQSLOD=-0.0599;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:18.94:95,19,0	0/0:7,0:7:21.04:0,21,244	0/0:26,0:11:17.65:0,18,185	0/0:21,1:14:21.44:0,21,303	0/0:8,0:8:17.88:0,18,233	0/0:9,0:9:27.07:0,27,334	0/0:18,0:18:54.16:0,54,685	0/0:29,0:29:46.99:0,47,826	0/0:19,0:19:57.13:0,57,682	0/0:17,0:17:51.13:0,51,630	0/0:13,0:13:39.03:0,39,467	1/1:13,0:13:12.91:99,13,0	1/1:7,0:7:5.50:43,5,0	0/0:16,0:16:48.06:0,48,555	0/0:16,0:16:45.07:0,45,524	0/0:7,0:7:21.07:0,21,272	0/0:31,0:31:90.20:0,90,1100	1/1:1,10:11:15.52:207,16,0	0/0:32,0:32:92.82:0,93,1056	0/0:14,0:14:42.11:0,42,525	0/0:17,0:17:51.14:0,51,630	1/1:9,0:9:12.77:79,13,0	1/1:7,0:7:11.63:69,12,0	1/1:18,0:18:17.53:109,18,0	0/0:14,0:14:42.10:0,42,503	0/0:27,0:27:81.26:0,81,1032	0/0:27,0:27:81.24:0,81,1030	0/0:11,0:11:33.05:0,33,393
chr10	72952289	.	G	GA	7930.34	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-3.579;DP=631;FS=0.696;HRun=0;HaplotypeScore=96.9666;InbreedingCoeff=0.9995;MQ=92.99;MQ0=0;MQRankSum=-6.137;QD=39.65;ReadPosRankSum=1.013;VQSLOD=5.0186;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,37:39:93.32:1484,93,0	0/0:11,0:11:33.11:0,33,460	0/0:31,0:31:90.26:0,90,1189	0/0:30,0:30:68.08:0,68,904	0/0:17,0:17:51.17:0,51,719	0/0:17,0:17:51.17:0,51,713	0/0:15,0:15:42.14:0,42,586	0/0:35,0:35:96.31:0,96,1326	0/0:20,0:20:60.20:0,60,838	0/0:23,0:22:66.22:0,66,909	0/0:12,0:12:36.12:0,36,503	1/1:0,26:26:78.20:1210,78,0	1/1:2,33:35:96.28:1501,96,0	0/0:12,0:12:36.03:0,36,463	0/0:27,0:27:81.24:0,81,1085	0/0:21,0:21:60.15:0,60,816	0/0:21,0:21:63.19:0,63,862	1/1:0,17:17:51.17:814,51,0	0/0:19,0:19:54.18:0,54,748	0/0:22,0:22:66.22:0,66,919	0/0:36,0:36:99:0,102,1408	1/1:0,21:22:51.17:815,51,0	1/1:1,31:32:66.23:1052,66,0	1/1:0,29:29:66.12:1054,66,0	0/0:13,0:13:36.12:0,36,503	0/0:19,0:19:57.18:0,57,781	0/0:22,0:22:66.22:0,66,923	0/0:8,0:8:24.05:0,24,316
chr10	72952348	.	TTTTTTTG	T	2141.36	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.651;DP=463;FS=24.842;HRun=0;HaplotypeScore=127.5053;InbreedingCoeff=0.9054;MQ=41.03;MQ0=43;MQRankSum=-5.237;QD=22.78;ReadPosRankSum=5.767;VQSLOD=1.0080;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,15:21:31.65:786,32,0	0/0:13,0:13:36.06:0,36,920	0/0:7,0:2:5.89:0,6,65	0/0:3,0:2:6.02:0,6,75	0/0:26,0:25:36.17:0,36,983	0/0:10,0:10:12.49:0,12,538	0/0:22,0:19:51.04:0,51,1092	0/0:30,0:28:69.07:0,69,1473	0/0:18,0:15:30.03:0,30,620	0/0:14,0:13:37.60:0,38,790	0/0:16,0:16:37.28:0,37,710	1/1:7,1:7:11.13:96,11,0	1/1:4,7:11:25.98:425,26,0	0/0:15,0:14:39.13:0,39,873	0/0:20,0:20:56.39:0,56,1241	0/0:19,0:18:53.05:0,53,1043	0/0:23,0:21:35.55:0,36,647	1/1:9,3:11:1.80:247,2,0	0/0:20,0:19:51.04:0,51,793	0/0:15,0:14:41.92:0,42,921	0/0:15,0:12:28.71:0,29,570	1/1:3,3:5:14.84:192,15,0	1/1:6,4:10:17.07:244,17,0	1/1:7,8:13:23.66:337,24,0	0/0:16,0:15:35.06:0,35,638	0/0:21,0:20:60.21:0,60,1404	0/0:26,0:25:69.02:0,69,1391	0/0:20,0:13:36.03:0,36,872
chr10	72952359	.	CT	C	817.80	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=9.876;DP=406;FS=35.969;HRun=8;HaplotypeScore=76.6498;InbreedingCoeff=0.8938;MQ=37.27;MQ0=46;MQRankSum=-5.804;QD=13.19;ReadPosRankSum=6.273;VQSLOD=0.9118;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,15:16:30.37:340,30,0	0/0:10,0:10:12.47:0,12,128	./.	0/0:1,0:1:2.98:0,3,21	0/0:24,0:23:35.45:0,35,384	0/0:9,0:9:17.08:0,17,187	0/0:24,0:21:37.84:0,38,370	0/0:25,0:21:36.53:0,37,397	0/0:15,0:12:17.72:0,18,188	0/0:13,0:12:21.06:0,21,253	0/0:13,0:13:30.02:0,30,314	./.	1/1:0,7:7:20.93:169,21,0	0/0:12,0:11:29.61:0,30,293	0/0:21,0:21:53.17:0,53,601	0/0:14,1:15:7.17:0,7,369	0/0:22,0:20:32.21:0,32,347	1/1:2,6:7:18.01:165,18,0	0/0:19,0:11:15.05:0,15,179	0/0:14,0:13:18.52:0,19,207	0/0:18,0:14:18.06:0,18,217	1/1:1,3:3:5.99:49,6,0	1/1:1,4:4:8.95:68,9,0	1/1:3,8:9:23.95:199,24,0	0/0:20,0:19:33.06:0,33,362	0/0:21,0:20:39.12:0,39,470	0/0:25,0:24:47.99:0,48,494	0/0:20,0:13:30.09:0,30,355
chr10	72952731	.	AAAACAAAC	A	5592.22	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.138;DP=689;FS=9.717;HRun=0;HaplotypeScore=163.3072;InbreedingCoeff=0.9377;MQ=57.89;MQ0=2;MQRankSum=-13.002;QD=34.52;ReadPosRankSum=3.369;VQSLOD=3.8251;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,27:36:32.35:1173,32,0	0/0:10,0:10:21.06:0,21,729	0/0:24,0:13:21.28:0,21,562	0/0:28,0:20:36.11:0,36,1108	0/0:28,0:28:66.23:0,66,2457	0/0:13,0:13:39.13:0,39,1573	0/0:20,0:20:23.63:0,24,1618	0/0:32,0:32:78.21:0,78,2541	0/0:28,0:28:78.27:0,78,3006	0/0:28,0:28:72.24:0,72,2645	0/0:24,0:24:57.19:0,57,2177	1/1:1,20:21:45.15:1181,45,0	1/1:3,21:24:53.85:1441,54,0	0/0:26,0:26:69.24:0,69,2716	0/0:31,0:31:78.27:0,78,2925	0/0:20,0:20:57.20:0,57,2185	0/0:35,0:35:7.75:0,8,2974	1/1:4,18:22:2.88:80,3,0	0/0:27,0:27:69.24:0,69,2535	0/0:25,0:25:60.17:0,60,2145	0/0:21,0:21:42.13:0,42,1490	1/1:1,6:7:15.05:355,15,0	1/1:5,20:24:33.05:861,33,0	1/1:7,20:27:23.51:502,24,0	0/0:31,0:31:84.29:0,84,3410	0/0:33,0:33:93.32:0,93,3567	0/0:38,0:38:99:0,105,3953	0/0:4,0:3:9.03:0,9,383
chr10	72953006	.	C	CATGTCCCCA	13405.85	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-4.515;DP=699;FS=7.818;HRun=0;HaplotypeScore=181.1572;InbreedingCoeff=0.9942;MQ=73.43;MQ0=0;MQRankSum=-15.826;QD=79.32;ReadPosRankSum=0.973;VQSLOD=4.2759;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,21:39:66.16:2880,66,0	0/0:9,0:9:24.08:0,24,675	0/0:20,0:20:29.69:0,30,1119	0/0:16,0:17:39.11:0,39,1078	0/0:17,0:17:51.18:0,51,1441	0/0:28,0:28:78.27:0,78,2286	0/0:32,0:32:90.30:0,90,2463	0/0:20,0:20:48.14:0,48,1180	0/0:34,0:34:84.29:0,84,2445	0/0:32,0:32:96.29:0,96,2529	0/0:17,0:17:51.16:0,51,1432	1/1:10,22:33:78.23:3291,78,0	1/1:5,18:24:60.21:2784,60,0	0/0:38,0:38:99:0,111,3075	0/0:27,0:27:75.23:0,75,2066	0/0:26,0:26:72.24:0,72,1875	0/0:31,0:31:90.31:0,90,2597	1/1:9,8:21:45.15:1937,45,0	0/0:25,0:25:60.17:0,60,1417	0/0:25,0:25:63.22:0,63,1768	0/0:56,0:56:99:0,156,4094	1/1:2,5:8:18.02:626,18,0	1/1:7,10:19:20.78:745,21,0	1/1:9,13:24:29.62:1143,30,0	0/0:16,0:16:45.15:0,45,1278	0/0:26,0:26:75.26:0,75,2142	0/0:26,0:26:72.24:0,72,2025	0/0:8,0:8:15.05:0,15,420
chr10	72953450	.	CACAG	C	5335.07	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.728;DP=717;FS=0.822;HRun=0;HaplotypeScore=124.5647;InbreedingCoeff=0.9905;MQ=86.19;MQ0=0;MQRankSum=-4.196;QD=45.60;ReadPosRankSum=4.617;VQSLOD=5.0682;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,154,3947	0/0:8,0:8:24.08:0,24,599	0/0:20,0:20:54.16:0,54,1254	0/0:27,0:27:66.20:0,66,1556	0/0:21,0:21:60.21:0,60,1583	0/0:26,0:26:75.24:0,75,1921	0/0:37,0:37:99:0,99,2559	0/0:31,0:31:87.29:0,87,2156	0/0:26,0:26:72.25:0,72,1901	0/0:21,0:21:63.22:0,63,1612	0/0:15,0:15:45.15:0,45,1182	1/1:0,19:19:45.15:828,45,0	1/1:0,22:22:60.20:1086,60,0	0/0:24,1:25:11:0,11,1553	0/0:28,0:28:81.28:0,81,2117	0/0:31,0:31:90.31:0,90,2347	0/0:27,0:27:81.28:0,81,2103	0/0:16,0:16:48.16:0,48,1245	0/0:23,0:23:57.20:0,57,1503	0/0:18,0:18:51.18:0,51,1342	0/0:42,0:42:99:0,117,2997	1/1:1,29:30:75.26:1379,75,0	1/1:0,11:11:30.10:552,30,0	1/1:2,33:35:81.28:1491,81,0	0/0:23,0:23:66.23:0,66,1682	0/0:28,0:28:84.29:0,84,2204	0/0:40,0:40:99:0,105,2760	0/0:14,0:14:36.12:0,36,951
chr10	72953645	.	GAC	G	771.80	PASS	AB=0.893;AC=15;AF=0.278;AN=54;BaseQRankSum=6.086;DP=646;FS=3.038;HRun=0;HaplotypeScore=98.6660;InbreedingCoeff=-0.0802;MQ=60.45;MQ0=11;MQRankSum=0.342;QD=2.43;ReadPosRankSum=2.151;VQSLOD=2.0033;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:14.74:0,15,116	0/0:11,0:11:15.05:0,15,225	0/0:27,0:11:3.01:0,3,45	./.	1/1:6,10:15:21.06:234,21,0	0/1:23,1:27:24.60:25,0,498	0/1:27,3:30:61.01:61,0,370	0/1:30,1:31:5.42:5,0,318	0/0:34,2:36:35.83:0,36,936	0/0:16,0:16:9.02:0,9,117	0/1:9,1:10:21.33:21,0,124	0/0:26,0:26:6:0,6,55	0/0:19,0:18:8.95:0,9,86	1/1:9,12:21:33.02:351,33,0	0/0:26,0:26:45.13:0,45,658	0/1:24,6:30:42.97:43,0,605	0/1:22,6:28:74.30:74,0,628	0/0:15,0:12:20.92:0,21,188	0/1:13,2:15:17.42:17,0,144	0/1:11,2:13:36.66:37,0,333	0/1:42,2:43:9.63:10,0,629	0/0:29,0:28:14.77:0,15,158	0/0:15,0:15:3.01:0,3,40	0/0:23,0:23:2.86:0,3,24	0/1:18,2:20:36.71:37,0,287	0/0:23,0:23:30.06:0,30,394	0/1:29,4:33:15.47:15,0,605	0/0:5,0:5:9.01:0,9,114
chr10	72953681	.	C	CACACAT	756.46	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=4.830;DP=684;FS=0.815;HRun=0;HaplotypeScore=159.9805;InbreedingCoeff=0.1496;MQ=61.05;MQ0=10;MQRankSum=-2.746;QD=4.53;ReadPosRankSum=-0.525;VQSLOD=2.3797;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,25:40:14.88:335,15,0	0/0:10,0:10:27.02:0,27,412	0/0:27,0:20:43.14:0,43,543	0/0:29,0:21:37.68:0,38,515	0/0:17,0:16:29.69:0,30,450	0/0:29,0:29:75.08:0,75,1216	0/0:28,0:28:75.02:0,75,996	0/0:26,0:26:75.07:0,75,942	0/0:31,0:31:84.16:0,84,1606	0/0:15,0:15:32.04:0,32,397	0/0:13,0:13:33.01:0,33,420	0/1:25,0:25:99:163,0,113	0/1:21,0:20:68.85:69,0,138	0/0:21,0:21:54.01:0,54,729	0/0:25,0:25:43.68:0,44,1169	0/0:35,0:35:93.04:0,93,1454	0/0:32,0:31:87.03:0,87,1548	0/1:20,0:17:99:211,0,192	0/0:16,0:16:41.12:0,41,463	0/0:19,0:18:54.05:0,54,866	0/0:38,0:37:83.90:0,84,1176	0/1:35,0:34:72.89:73,0,199	0/0:13,0:13:1.37:0,1,148	0/1:26,0:26:40.87:41,0,119	0/0:21,0:21:63.04:0,63,870	0/0:23,0:23:57.05:0,57,725	0/0:35,0:35:89.79:0,90,1409	0/0:14,0:13:35.95:0,36,389
chr10	72957462	.	GCCTGGTGAGA	G	7879.99	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.706;DP=648;FS=9.056;HRun=0;HaplotypeScore=200.3633;InbreedingCoeff=0.9990;MQ=84.10;MQ0=0;MQRankSum=-14.391;QD=58.81;ReadPosRankSum=2.043;VQSLOD=3.9714;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,30:40:57.19:1724,57,0	0/0:9,0:9:27.09:0,27,1441	0/0:23,0:23:63.18:0,63,2562	0/0:24,0:24:63.17:0,63,2595	0/0:21,0:21:63.22:0,63,3187	0/0:22,0:22:66.23:0,66,3398	0/0:24,0:24:69.24:0,69,3624	0/0:41,0:41:99:0,120,5692	0/0:19,0:19:57.18:0,57,2721	0/0:28,0:28:84.29:0,84,4312	0/0:26,0:26:75.26:0,75,3827	1/1:2,18:20:45.15:1392,45,0	1/1:3,17:20:48.16:1577,48,0	0/0:25,0:25:72.25:0,72,3655	0/0:32,0:32:90.28:0,90,4276	0/0:24,0:24:69.24:0,69,3390	0/0:29,0:29:84.29:0,84,4346	0/0:15,0:15:45.09:0,45,1699	0/0:17,0:17:48.14:0,48,2313	0/0:15,0:15:42.62:0,43,2169	0/0:39,0:39:99:0,105,5270	1/1:0,20:19:42.14:1291,42,0	1/1:4,17:21:42:1258,42,0	1/1:1,12:13:21.54:638,22,0	0/0:22,0:22:63.20:0,63,3086	0/0:23,0:23:69.23:0,69,3345	0/0:23,0:23:69.24:0,69,3415	0/0:13,0:13:36.12:0,36,1839
chr10	72957600	.	GCA	G	1589.39	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=8.040;DP=590;FS=16.586;HRun=0;HaplotypeScore=104.5921;InbreedingCoeff=0.7926;MQ=56.78;MQ0=10;MQRankSum=-0.687;QD=11.11;ReadPosRankSum=3.156;VQSLOD=2.5162;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:7.54:18,0,8	0/0:8,0:8:18.04:0,18,271	0/0:19,0:2:4.53:0,5,15	0/0:20,0:4:8.15:0,8,82	0/0:12,0:12:30.10:0,30,476	0/0:20,1:21:42.14:0,42,685	0/0:31,0:31:65.69:0,66,968	0/0:24,0:23:45.15:0,45,712	0/0:16,1:17:33.09:0,33,495	0/0:22,0:22:48.15:0,48,750	0/0:14,0:14:21.38:0,21,342	1/1:16,8:24:22.96:412,23,0	1/1:16,5:21:42.09:453,42,0	0/0:31,0:31:39.02:0,39,855	0/0:24,0:24:57.18:0,57,890	0/0:16,0:16:42.12:0,42,644	0/0:25,0:25:54.66:0,55,891	0/1:12,0:12:2.22:2,0,38	0/0:20,0:20:39.96:0,40,642	0/0:12,0:12:33.05:0,33,474	0/0:65,2:64:72.27:0,72,2190	1/1:14,3:17:24.07:287,24,0	1/1:12,2:14:23.85:255,24,0	1/1:23,6:29:30.83:340,31,0	0/0:20,0:20:33.11:0,33,526	0/0:16,1:17:10.23:0,10,609	0/0:18,0:18:45.15:0,45,725	0/0:9,0:8:18.06:0,18,289
chr10	72957608	.	ACACACACG	A	3097.62	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=3.488;DP=623;FS=19.412;HRun=0;HaplotypeScore=170.3274;InbreedingCoeff=0.8906;MQ=54.83;MQ0=19;MQRankSum=0.892;QD=26.25;ReadPosRankSum=4.584;VQSLOD=2.1085;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:9.24:0,9,170	0/0:9,0:8:21.05:0,21,358	0/0:18,0:2:4.63:0,5,16	0/0:19,0:4:5.65:0,6,86	0/0:14,0:13:33.11:0,33,758	0/0:24,0:24:49.11:0,49,1195	0/0:34,0:33:72.24:0,72,1482	0/0:21,0:20:53.52:0,54,975	0/0:20,0:20:39.11:0,39,780	0/0:22,0:20:59.85:0,60,1331	0/0:14,0:14:0.07:0,0,545	1/1:23,2:25:40.95:748,41,0	1/1:18,2:20:42.14:812,42,0	0/0:34,0:33:50.99:0,51,1491	0/0:24,0:24:60.38:0,60,1372	0/0:20,0:19:48.14:0,48,1113	0/0:25,0:25:67.67:0,68,1842	1/1:11,0:11:19.79:191,20,0	0/0:24,0:23:40.01:0,40,1284	0/0:14,0:14:36.02:0,36,731	0/0:76,0:68:99:0,131,3500	1/1:15,1:16:23.48:470,23,0	1/1:14,0:14:23.86:398,24,0	1/1:29,3:31:32.80:662,33,0	0/0:17,0:16:33.11:0,33,768	0/0:20,0:19:38.07:0,38,1127	0/0:19,0:19:48.14:0,48,954	0/0:11,0:10:27.09:0,27,840
chr10	72957662	.	ACAC	A	3863.12	PASS	AB=0.938;AC=30;AF=0.536;AN=56;BaseQRankSum=-4.051;DP=601;FS=11.623;HRun=0;HaplotypeScore=84.9402;InbreedingCoeff=-0.1997;MQ=53.13;MQ0=97;MQRankSum=-0.218;QD=7.60;ReadPosRankSum=0.816;VQSLOD=1.8755;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,16:21:1.41:0,1,3	1/1:5,4:5:5.60:53,6,0	0/0:24,0:11:32.66:0,33,274	0/0:19,0:12:35.89:0,36,313	0/1:10,0:9:2:57,0,2	0/1:20,1:16:16.29:110,0,16	0/1:34,1:27:60.89:200,0,61	0/1:21,0:16:65.96:215,0,66	0/1:14,2:13:2.91:222,0,3	0/1:19,1:12:99:144,0,127	0/0:13,0:11:5.96:0,6,66	1/1:7,16:18:6.02:86,6,0	1/1:7,5:6:15.05:218,15,0	0/1:22,0:14:44.88:98,0,45	0/1:20,1:18:37.89:128,0,38	0/1:10,12:20:75.79:127,0,76	0/1:33,0:27:50.20:50,0,149	1/1:19,0:10:24.03:278,24,0	0/1:29,2:22:92.27:258,0,92	0/1:10,0:7:5.91:88,0,6	0/1:68,2:40:63.04:591,0,63	1/1:9,1:5:5.66:67,6,0	1/1:17,1:17:4.88:77,5,0	1/1:12,25:29:15.01:178,15,0	0/0:13,0:10:10.10:0,10,54	0/1:16,2:15:20.45:271,0,20	0/1:12,1:10:37.88:88,0,38	0/1:15,2:14:54.60:260,0,55
chr10	72957664	.	AC	A	5199.71	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-3.648;DP=592;FS=2.787;HRun=5;HaplotypeScore=69.0878;InbreedingCoeff=0.6317;MQ=55.95;MQ0=94;MQRankSum=-3.145;QD=9.94;ReadPosRankSum=5.519;VQSLOD=1.4224;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,2:20:0.47:0,0,2	1/1:9,0:5:3.01:34,3,0	0/0:26,0:13:35.66:0,36,301	0/0:19,1:13:13.47:0,13,288	1/1:7,1:7:8.92:82,9,0	1/1:8,11:14:26.60:280,27,0	1/1:12,20:24:41.04:458,41,0	1/1:10,12:17:29.98:310,30,0	1/1:5,12:14:30:311,30,0	1/1:9,8:11:4.94:176,5,0	1/1:13,0:11:1.36:2,1,0	1/1:19,4:18:5.98:47,6,0	1/1:7,4:6:14.97:133,15,0	1/1:11,13:16:17.99:183,18,0	1/1:8,12:17:35.99:376,36,0	1/1:17,3:18:17.93:162,18,0	1/1:27,5:27:28.15:245,28,0	1/1:5,14:11:24.06:264,24,0	1/1:19,12:22:32.97:343,33,0	1/1:2,9:8:15.04:169,15,0	1/1:32,34:38:59.89:601,60,0	1/1:1,10:6:5.85:67,6,0	1/1:18,0:17:5.26:42,5,0	1/1:34,2:28:14.99:146,15,0	1/1:14,1:12:5.67:41,6,0	1/1:7,9:14:26.97:275,27,0	1/1:7,5:9:14.96:142,15,0	1/1:6,11:14:30:310,30,0
chr10	72957665	.	C	CA	3740.83	PASS	AB=0.856;AC=43;AF=0.768;AN=56;BaseQRankSum=1.145;DP=596;FS=0.000;HRun=1;HaplotypeScore=81.4949;InbreedingCoeff=0.1211;MQ=56.36;MQ0=94;MQRankSum=-2.572;QD=7.13;ReadPosRankSum=7.355;VQSLOD=0.3194;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:22:0.44:0,0,1	1/1:5,3:4:2.73:33,3,0	0/0:26,0:13:35.65:0,36,299	0/0:20,0:13:13.47:0,13,289	1/1:3,7:10:6.90:79,7,0	1/1:16,3:14:1.47:125,1,0	1/1:29,4:25:9.46:210,9,0	0/1:19,3:17:3.52:255,0,4	1/1:14,3:14:21.77:185,22,0	1/1:17,2:12:26.75:254,27,0	0/1:4,9:11:19.86:40,0,20	1/1:23,0:18:5.34:22,5,0	1/1:10,1:6:14.09:98,14,0	0/1:20,3:15:48.88:111,0,49	1/1:18,2:18:21.70:136,22,0	0/1:18,2:18:13.28:15,0,13	1/1:9,21:25:8.54:388,9,0	1/1:18,2:11:23.93:250,24,0	0/1:28,2:21:8.14:219,0,8	1/1:12,0:9:9.18:76,9,0	1/1:57,9:39:33.45:436,33,0	1/1:12,0:7:6.02:68,6,0	1/1:4,14:17:4.99:70,5,0	1/1:31,5:28:14.54:128,15,0	1/1:2,13:12:9.92:142,10,0	1/1:16,2:15:3.92:202,4,0	0/1:9,2:8:12.54:38,0,13	0/1:15,1:13:21.94:158,0,22
chr10	72958230	.	TCA	T	242.98	PASS	AB=0.929;AC=17;AF=0.354;AN=48;BaseQRankSum=-1.626;DP=554;FS=4.391;HRun=0;HaplotypeScore=79.4198;InbreedingCoeff=0.1836;MQ=67.55;MQ0=15;MQRankSum=0.270;QD=1.46;ReadPosRankSum=2.731;VQSLOD=1.0024;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:5.99:0,6,48	1/1:5,0:5:3.01:32,3,0	./.	./.	0/0:14,0:14:3.01:0,3,44	0/0:17,0:22:9:0,9,86	0/0:24,0:22:6.48:0,6,88	./.	1/1:11,1:13:3:32,3,0	1/1:12,1:13:3:32,3,0	1/1:11,4:15:3.01:32,3,0	0/0:26,0:26:8.99:0,9,88	0/0:13,0:13:14.77:0,15,108	0/1:16,1:19:34.05:34,0,48	0/1:13,3:16:51.76:52,0,74	0/0:10,0:10:3.01:0,3,43	1/1:23,4:28:8.24:77,8,0	0/0:16,0:14:9.47:0,9,126	0/0:17,0:17:6.02:0,6,87	./.	0/0:30,0:29:1.27:0,1,363	0/0:13,0:13:11.97:0,12,108	0/0:13,0:13:5.85:0,6,48	0/0:35,0:36:32.91:0,33,269	1/1:11,0:11:3.01:32,3,0	0/1:20,0:20:22.83:23,0,79	0/1:15,1:16:16.84:17,0,149	0/1:9,0:9:25.81:26,0,38
chr10	72958239	.	C	CACACAT	218.72	PASS	AB=0.931;AC=6;AF=0.107;AN=56;BaseQRankSum=6.427;DP=589;FS=4.282;HRun=0;HaplotypeScore=124.6791;InbreedingCoeff=-0.0922;MQ=59.45;MQ0=17;MQRankSum=-1.492;QD=1.58;ReadPosRankSum=0.800;VQSLOD=2.2928;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,23:33:43.81:163,0,44	0/0:4,0:4:11.98:0,12,113	0/0:39,0:16:32.75:0,33,333	0/0:38,0:19:33.04:0,33,328	0/0:17,0:17:41.88:0,42,374	0/0:23,0:23:41.74:0,42,340	0/0:24,0:22:50.34:0,50,454	0/0:19,0:18:41.17:0,41,336	0/0:15,0:15:29.94:0,30,264	0/0:14,0:14:41.88:0,42,380	0/0:14,0:14:17.99:0,18,173	0/1:25,0:25:2.51:3,0,99	0/1:15,0:15:13.69:14,0,155	0/0:24,0:23:50.92:0,51,542	0/0:18,0:18:41.95:0,42,432	0/0:14,0:14:23.88:0,24,226	0/0:29,0:28:14.39:0,14,471	0/0:19,0:17:38.12:0,38,442	0/0:16,0:16:38.82:0,39,381	0/0:16,0:16:35.93:0,36,292	0/0:42,0:40:84.07:0,84,1046	0/1:12,0:12:34.02:34,0,34	0/1:13,0:13:6.10:6,0,12	0/1:38,0:38:71.85:113,0,72	0/0:10,0:10:15:0,15,150	0/0:29,0:29:68.56:0,69,655	0/0:19,0:19:35.45:0,35,489	0/0:8,0:8:18.87:0,19,215
chr10	72958245	.	C	CACAT	1424.79	PASS	AB=0.731;AC=7;AF=0.125;AN=56;BaseQRankSum=0.493;DP=580;FS=2.294;HRun=0;HaplotypeScore=102.2373;InbreedingCoeff=0.2212;MQ=57.17;MQ0=19;MQRankSum=0.771;QD=10.79;ReadPosRankSum=3.066;VQSLOD=2.8279;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:31:16.63:49,0,17	0/0:4,0:4:9:0,9,85	0/0:33,0:10:9.02:0,9,94	0/0:37,0:16:23.99:0,24,220	0/0:18,0:18:47.81:0,48,407	0/0:23,0:23:39.81:0,40,318	0/0:24,0:22:47.57:0,48,407	0/0:23,0:22:41.45:0,41,386	0/0:16,0:16:32.94:0,33,276	0/0:15,0:15:38.91:0,39,340	0/0:13,0:13:20.98:0,21,185	0/1:8,14:23:39.20:158,0,39	0/1:14,1:15:8.33:320,0,8	0/0:24,0:23:50.82:0,51,482	0/0:17,0:17:41.95:0,42,393	0/0:12,0:12:26.91:0,27,245	0/0:31,0:30:48.91:0,49,426	0/0:19,0:17:41.32:0,41,419	0/0:13,0:13:35.82:0,36,336	0/0:14,0:14:35.93:0,36,292	0/0:47,0:45:96.09:0,96,1046	0/1:2,10:13:11.29:227,0,11	1/1:1,11:12:5.89:103,6,0	0/1:9,24:36:5.88:697,0,6	0/0:9,0:9:15:0,15,137	0/0:29,0:29:82.69:0,83,736	0/0:19,0:19:35.71:0,36,428	0/0:8,0:8:23.78:0,24,226
chr10	72958435	.	AT	A	4798.72	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.535;DP=650;FS=1.226;HRun=1;HaplotypeScore=78.0111;InbreedingCoeff=0.9999;MQ=85.11;MQ0=0;MQRankSum=-10.795;QD=36.08;ReadPosRankSum=-0.213;VQSLOD=4.8063;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:33:72.17:999,72,0	0/0:14,0:14:42.14:0,42,670	0/0:24,0:24:72.25:0,72,1142	0/0:32,0:32:96.32:0,96,1498	0/0:24,0:24:72.23:0,72,1123	0/0:27,0:27:78.27:0,78,1244	0/0:23,0:23:69.24:0,69,1098	0/0:25,0:25:75.25:0,75,1179	0/0:29,0:29:87.27:0,87,1344	0/0:29,0:29:87.29:0,87,1370	0/0:20,0:20:60.20:0,60,955	1/1:2,21:23:69.23:952,69,0	1/1:1,11:12:36.12:503,36,0	0/0:19,0:19:57.19:0,57,911	0/0:29,0:29:87.30:0,87,1388	0/0:30,0:30:90.29:0,90,1414	0/0:33,0:33:96.31:0,96,1506	1/1:1,13:14:36.12:501,36,0	0/0:19,0:19:57.17:0,57,858	0/0:26,0:26:78.25:0,78,1218	0/0:35,0:35:99:0,99,1583	1/1:1,15:16:45.15:628,45,0	1/1:1,19:20:57.17:772,57,0	1/1:1,13:13:32.77:443,33,0	0/0:14,0:14:42.14:0,42,670	0/0:25,0:25:75.26:0,75,1200	0/0:24,0:24:72.23:0,72,1123	0/0:16,0:16:48.16:0,48,748
chr10	72958476	.	CT	C	5030.83	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=16.224;DP=669;FS=4.377;HRun=1;HaplotypeScore=89.7841;InbreedingCoeff=0.9986;MQ=81.32;MQ0=0;MQRankSum=-11.677;QD=34.94;ReadPosRankSum=1.477;VQSLOD=4.9954;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:81.27:1115,81,0	0/0:15,0:15:42.13:0,42,649	0/0:22,0:22:66.18:0,66,977	0/0:22,0:22:18.91:0,19,719	0/0:24,0:24:72.22:0,72,1104	0/0:30,0:30:90.29:0,90,1413	0/0:21,0:21:63.18:0,63,960	0/0:28,0:28:81.25:0,81,1232	0/0:25,0:25:75.21:0,75,1129	0/0:22,0:22:63.21:0,63,1003	0/0:21,0:21:57:0,57,855	1/1:0,20:20:54.18:747,54,0	1/1:0,11:11:27.09:372,27,0	0/0:25,0:25:72.22:0,72,1100	0/0:22,0:22:66.21:0,66,1028	0/0:31,0:31:93.30:0,93,1463	0/0:33,0:33:99:0,99,1535	1/1:0,15:15:42.14:583,42,0	0/0:25,0:25:72.18:0,72,1021	0/0:27,0:27:81.25:0,81,1249	0/0:43,0:43:99:0,129,1959	1/1:0,25:25:63.21:864,63,0	1/1:1,20:21:57.18:789,57,0	1/1:1,18:18:42.09:559,42,0	0/0:17,0:17:51.17:0,51,815	0/0:29,0:29:87.28:0,87,1348	0/0:24,0:24:72.25:0,72,1144	0/0:19,0:19:57.19:0,57,910
chr10	72959129	.	TC	T	1833.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.828;DP=753;FS=2.530;HRun=2;HaplotypeScore=70.0964;InbreedingCoeff=0.9995;MQ=70.56;MQ0=0;MQRankSum=-3.657;QD=33.95;ReadPosRankSum=0.526;VQSLOD=3.9146;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,54:54:99:1928,150,0	0/0:15,0:15:45.11:0,45,632	0/0:22,0:22:66.05:0,66,944	0/0:29,0:29:87.29:0,87,1270	0/0:20,0:20:57.18:0,57,834	0/0:22,0:22:63.19:0,63,905	0/0:26,0:26:72.24:0,72,1079	0/0:32,0:32:93.29:0,93,1340	0/0:26,0:26:78.26:0,78,1167	0/0:33,0:33:96.33:0,96,1439	0/0:20,0:20:57.19:0,57,845	0/0:21,0:21:60.20:0,60,899	0/0:27,0:27:78.24:0,78,1146	0/0:22,0:22:66.22:0,66,987	0/0:28,0:28:81.22:0,81,1187	0/0:23,0:23:69.18:0,69,953	0/0:31,0:31:87.27:0,87,1265	0/0:24,0:24:72.24:0,72,1079	0/0:26,0:26:75.22:0,75,1083	0/0:33,0:33:90.30:0,90,1347	0/0:39,0:39:99:0,114,1644	0/0:31,0:31:90.30:0,90,1330	0/0:20,0:20:60.18:0,60,856	0/0:25,0:25:75.23:0,75,1081	0/0:23,0:23:69.22:0,69,997	0/0:37,0:37:99:0,105,1556	0/0:34,0:33:99:0,99,1483	0/0:10,0:10:30.10:0,30,449
chr10	72959302	.	GAAAA	G	3551.16	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.857;DP=697;FS=5.884;HRun=13;HaplotypeScore=123.5915;InbreedingCoeff=0.9885;MQ=67.12;MQ0=4;MQRankSum=1.885;QD=20.18;ReadPosRankSum=7.571;VQSLOD=1.5831;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:33:9.35:52,9,0	0/0:9,0:10:27.08:0,27,537	0/0:29,0:20:33.12:0,33,609	0/0:10,0:13:25.90:0,26,322	0/0:28,0:30:66.17:0,66,1287	0/0:32,0:33:87.24:0,87,1721	0/0:13,0:16:42.14:0,42,925	0/0:39,0:43:93.23:0,93,1768	0/0:25,0:26:66.22:0,66,1450	0/0:32,0:35:84.22:0,84,1690	0/0:20,0:20:51.10:0,51,984	1/1:7,14:20:30.01:430,30,0	1/1:4,26:30:51.10:737,51,0	0/0:15,0:18:54:0,54,1035	0/0:19,0:18:48:0,48,966	0/0:21,0:21:60.16:0,60,1209	0/0:17,0:24:54.17:0,54,1134	1/1:1,0:22:21.18:56,21,0	0/0:22,0:25:59.67:0,60,1053	0/0:34,0:37:97.55:0,98,2027	0/0:16,0:16:30.10:0,30,722	1/1:1,20:21:50.93:690,51,0	1/1:1,23:23:59.94:796,60,0	1/1:3,22:25:54.14:790,54,0	0/0:23,0:25:75.05:0,75,1466	0/0:25,0:31:73.70:0,74,1307	0/0:39,0:39:90.24:0,90,1998	0/0:9,0:9:27.06:0,27,503
chr10	72959541	.	CA	C	6260.26	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=18.182;DP=736;FS=5.203;HRun=5;HaplotypeScore=83.7219;InbreedingCoeff=0.9999;MQ=86.79;MQ0=0;MQRankSum=-3.072;QD=30.69;ReadPosRankSum=5.299;VQSLOD=5.2059;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:44:99:1361,120,0	0/0:10,0:10:30.05:0,30,372	0/0:33,0:33:68.59:0,69,1112	0/0:20,0:20:51.12:0,51,648	0/0:25,0:25:72.23:0,72,970	0/0:29,0:29:78.22:0,78,1019	0/0:21,0:21:54.18:0,54,739	0/0:32,0:32:90.30:0,90,1229	0/0:27,0:27:78.23:0,78,1036	0/0:30,0:30:84.27:0,84,1122	0/0:25,0:25:60.19:0,60,806	1/1:0,24:24:63.18:715,63,0	1/1:3,22:25:66.19:748,66,0	0/0:22,0:22:57.19:0,57,780	0/0:30,0:30:87.29:0,87,1190	0/0:24,0:24:72.24:0,72,984	0/0:24,0:24:69.23:0,69,934	1/1:1,28:29:78.22:885,78,0	0/0:16,0:16:48.14:0,48,627	0/0:23,0:23:63.18:0,63,816	0/0:39,0:39:99:0,111,1499	1/1:2,19:21:54.15:612,54,0	1/1:0,16:16:48.14:544,48,0	1/1:2,43:45:99:1395,123,0	0/0:20,0:20:54.16:0,54,703	0/0:24,0:24:69.23:0,69,944	0/0:30,0:30:78.26:0,78,1066	0/0:28,0:28:72.24:0,72,985
chr10	72960211	.	G	GC	3926.74	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.295;DP=498;FS=4.284;HRun=1;HaplotypeScore=65.0340;InbreedingCoeff=0.9868;MQ=84.44;MQ0=1;MQRankSum=-3.185;QD=29.30;ReadPosRankSum=3.814;VQSLOD=3.4805;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,31:34:72.31:1038,72,0	0/0:8,0:8:18.05:0,18,235	0/0:12,0:12:36.10:0,36,463	0/0:19,0:19:51.14:0,51,690	0/0:19,0:19:54.18:0,54,749	0/0:20,0:20:57.17:0,57,779	0/0:25,0:25:72.24:0,72,1005	0/0:20,0:20:60.19:0,60,820	0/0:16,0:16:45.15:0,45,629	0/0:15,0:15:45.13:0,45,599	0/0:8,0:8:24.08:0,24,318	1/1:1,14:15:30:437,30,0	1/1:1,11:12:35.56:389,36,0	0/0:24,0:24:60.20:0,60,834	0/0:9,0:9:27.09:0,27,378	0/0:9,0:9:27.06:0,27,357	0/0:34,0:34:99:0,102,1418	1/1:0,39:39:99:1309,102,0	0/0:14,0:14:39.59:0,40,531	0/0:6,0:6:18.06:0,18,250	0/0:44,0:44:99:0,126,1725	1/1:0,6:6:15.05:179,15,0	1/1:3,2:6:12.03:155,12,0	1/1:2,16:18:30.23:419,30,0	0/0:20,0:20:57.19:0,57,796	0/0:13,0:13:36.12:0,36,503	0/0:22,0:22:63.17:0,63,843	0/0:7,0:7:21.03:0,21,272
chr10	72961251	.	TTTTG	T	1474.56	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.642;DP=675;FS=8.000;HRun=0;HaplotypeScore=116.8421;InbreedingCoeff=0.9985;MQ=66.20;MQ0=1;MQRankSum=-3.248;QD=35.96;ReadPosRankSum=0.306;VQSLOD=3.6152;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,35:41:93.32:1569,93,0	0/0:12,0:12:26.90:0,27,625	0/0:28,0:26:42.23:0,42,982	0/0:29,0:27:53.61:0,54,1339	0/0:20,0:20:54.09:0,54,1076	0/0:22,0:22:48.15:0,48,1070	0/0:17,0:17:42.14:0,42,1011	0/0:29,0:29:75.23:0,75,1605	0/0:29,0:29:87.28:0,87,2005	0/0:30,0:30:84.29:0,84,1914	0/0:18,0:18:48.08:0,48,1102	0/0:20,0:20:48.15:0,48,1158	0/0:22,0:22:57.11:0,57,1236	0/0:19,0:19:48.16:0,48,1083	0/0:38,0:38:99:0,108,2522	0/0:28,0:28:69.24:0,69,1661	0/0:35,0:35:93.24:0,93,2128	0/0:14,0:14:39.13:0,39,944	0/0:25,0:25:63.17:0,63,1285	0/0:24,0:24:69.20:0,69,1472	0/0:24,0:24:57.18:0,57,1351	0/0:18,0:18:48.16:0,48,1102	0/0:14,0:14:36.06:0,36,792	0/0:25,0:25:57.19:0,57,1249	0/0:14,0:14:41.88:0,42,920	0/0:38,0:38:99:0,102,2261	0/0:28,0:28:57.19:0,57,1231	0/0:14,0:14:36.12:0,36,879
chr10	72961339	.	GT	G	4945.74	PASS	AB=1.000;AC=54;AF=0.964;AN=56;BaseQRankSum=2.783;DP=375;FS=9.001;HRun=1;HaplotypeScore=125.1801;InbreedingCoeff=-0.0234;MQ=98.38;MQ0=0;MQRankSum=-4.785;QD=13.19;ReadPosRankSum=7.807;VQSLOD=3.1288;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:29.06:257,29,0	1/1:8,0:8:17.28:97,17,0	0/1:25,0:25:49.28:49,0,259	0/1:24,0:24:99:103,0,114	1/1:7,1:8:23.23:149,23,0	1/1:17,0:17:45.83:253,46,0	1/1:17,0:17:34.59:212,35,0	1/1:21,0:21:55.82:237,56,0	1/1:19,0:19:55.56:350,56,0	1/1:13,0:13:34.12:213,34,0	1/1:4,0:4:11.75:72,12,0	1/1:12,0:12:34.14:184,34,0	1/1:13,0:13:38.15:252,38,0	1/1:22,0:22:24.46:300,24,0	1/1:15,0:15:42.27:235,42,0	1/1:13,0:13:31.19:166,31,0	1/1:19,1:20:54.40:321,54,0	1/1:6,0:6:17.19:93,17,0	1/1:10,0:10:26.97:120,27,0	1/1:4,1:5:14.71:105,15,0	1/1:15,0:15:36.78:190,37,0	1/1:12,0:12:32.06:196,32,0	1/1:9,1:10:20.63:145,21,0	1/1:16,0:16:40.33:229,40,0	1/1:4,0:4:11.18:53,11,0	1/1:11,0:11:28.11:148,28,0	1/1:17,0:17:23.31:204,23,0	1/1:1,0:1:2.80:13,3,0
chr10	72963518	.	CAAA	C	283.95	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.120;DP=717;FS=1.237;HRun=3;HaplotypeScore=111.6103;InbreedingCoeff=0.9975;MQ=78.46;MQ0=0;MQRankSum=-5.369;QD=28.39;ReadPosRankSum=-0.260;VQSLOD=1.0106;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,3133	0/0:8,0:8:24.08:0,24,592	0/0:25,0:24:69.24:0,69,1611	0/0:23,0:23:61.09:0,61,1456	0/0:22,0:22:66.23:0,66,1627	0/0:26,0:26:78.27:0,78,1923	0/0:34,0:34:99:0,102,2464	0/0:34,0:34:99:0,99,2394	0/0:19,0:19:57.20:0,57,1406	0/0:31,0:31:93.32:0,93,2304	0/0:20,0:20:57.20:0,57,1399	0/0:18,0:18:54.18:0,54,1272	0/0:29,0:29:87.26:0,87,2068	0/0:31,0:31:93.31:0,93,2247	0/0:29,0:29:87.28:0,87,2095	0/0:27,0:27:81.26:0,81,1927	0/0:27,0:27:81.25:0,81,1921	1/1:1,9:10:30.05:378,30,0	0/0:19,0:19:57.20:0,57,1392	0/0:25,0:25:75.24:0,75,1765	0/0:33,0:33:99:0,99,2427	0/0:23,0:23:69.24:0,69,1682	0/0:18,0:18:54.19:0,54,1314	0/0:33,0:32:99:0,99,2443	0/0:20,0:20:60.21:0,60,1455	0/0:37,0:37:99:0,111,2742	0/0:26,0:26:78.27:0,78,1920	0/0:26,0:26:78.27:0,78,1925
chr10	72963524	.	TGCTGC	T	250.41	PASS	AB=0.571;AC=1;AF=0.018;AN=56;BaseQRankSum=4.539;DP=708;FS=0.000;HRun=0;HaplotypeScore=140.2968;InbreedingCoeff=0.2580;MQ=77.21;MQ0=0;MQRankSum=-4.494;QD=20.87;ReadPosRankSum=1.412;VQSLOD=3.3634;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,4438	0/0:8,0:8:24.08:0,24,798	0/0:21,0:21:58.43:0,58,1515	0/0:19,0:19:57.11:0,57,1694	0/0:24,0:24:72.25:0,72,2356	0/0:26,0:26:78.27:0,78,2568	0/0:33,0:33:99:0,99,3283	0/0:35,0:35:99:0,105,3347	0/0:19,0:19:57.20:0,57,1840	0/0:32,0:32:96.30:0,96,2963	0/0:19,0:19:57.20:0,57,1895	0/0:15,0:15:45.15:0,45,999	0/0:28,0:28:84.27:0,84,1833	0/0:28,0:28:84.29:0,84,2785	0/0:28,0:28:84.27:0,84,2562	0/0:27,0:27:81.28:0,81,2664	0/0:21,0:21:63.22:0,63,2045	0/1:3,9:12:7.23:325,0,7	0/0:19,0:19:57.20:0,57,1810	0/0:26,0:26:78.27:0,78,2458	0/0:34,0:34:99:0,102,3259	0/0:22,0:22:63.20:0,63,1375	0/0:21,0:21:63.15:0,63,1327	0/0:33,0:32:99:0,99,2181	0/0:22,0:22:66.23:0,66,2151	0/0:38,0:38:99:0,114,3767	0/0:26,0:26:78.27:0,78,2539	0/0:26,0:26:78.27:0,78,2555
chr10	72965396	.	ACCACTACCAACC	A	8439.52	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.374;DP=622;FS=4.818;HRun=0;HaplotypeScore=236.8022;InbreedingCoeff=0.9764;MQ=81.02;MQ0=0;MQRankSum=-14.101;QD=66.45;ReadPosRankSum=1.324;VQSLOD=4.0650;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,25:34:63.22:2208,63,0	0/0:6,0:6:15.05:0,15,820	0/0:17,0:17:48.16:0,48,2373	0/0:29,0:29:78.27:0,78,3511	0/0:30,0:30:84.26:0,84,4396	0/0:28,0:28:81.26:0,81,4639	0/0:46,0:46:99:0,123,6701	0/0:25,0:25:69.24:0,69,3750	0/0:21,0:21:63.20:0,63,3533	0/0:22,0:22:63.22:0,63,3325	0/0:19,0:19:54.19:0,54,3024	1/1:3,17:20:51.18:1883,51,0	1/1:4,10:14:30.10:1109,30,0	0/0:26,0:26:78.27:0,78,4545	0/0:15,0:15:45.15:0,45,2674	0/0:15,0:15:36.12:0,36,2078	0/0:32,0:32:90.31:0,90,5320	1/1:8,17:25:42.14:1515,42,0	0/0:25,0:25:69.66:0,70,3689	0/0:13,0:13:39.13:0,39,2366	0/0:39,0:39:99:0,108,6078	1/1:3,10:13:24.08:829,24,0	1/1:1,9:10:20.84:766,21,0	1/1:4,7:11:5.98:131,6,0	0/0:14,0:14:42.14:0,42,2438	0/0:26,0:26:72.25:0,72,3872	0/0:34,0:34:99:0,99,5093	0/0:13,0:13:36.12:0,36,1914
chr10	72966555	.	TG	T	5136.56	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=17.232;DP=716;FS=6.380;HRun=5;HaplotypeScore=88.3364;InbreedingCoeff=0.9892;MQ=93.12;MQ0=0;MQRankSum=-3.089;QD=30.04;ReadPosRankSum=2.157;VQSLOD=5.3595;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,58:60:99:1838,162,0	0/0:11,0:11:33.11:0,33,451	0/0:25,1:26:66.13:0,66,849	0/0:38,0:38:84.53:0,85,1227	0/0:22,0:22:60.20:0,60,820	0/0:20,0:20:54.18:0,54,738	0/0:43,0:43:99:0,123,1683	0/0:34,0:34:93.29:0,93,1243	0/0:25,0:25:69.23:0,69,943	0/0:20,0:20:54.17:0,54,724	0/0:12,0:12:33.08:0,33,430	1/1:1,23:24:66.19:748,66,0	1/1:4,18:22:48.13:544,48,0	0/0:24,0:24:72.24:0,72,985	0/0:26,0:26:78.26:0,78,1067	0/0:20,0:20:57.19:0,57,780	0/0:33,1:34:65.29:0,65,1264	1/1:1,18:19:48.14:545,48,0	0/0:17,0:17:48.15:0,48,635	0/0:15,0:15:45.15:0,45,616	0/0:62,0:62:99:0,175,2379	1/1:0,13:13:33.09:374,33,0	1/1:0,3:3:9.03:102,9,0	1/1:1,29:30:87.25:986,87,0	0/0:18,0:18:48.16:0,48,656	0/0:28,0:28:81.24:0,81,1075	0/0:33,0:33:96.31:0,96,1301	0/0:17,0:17:45.15:0,45,615
chr10	72966922	.	A	AAC	930.29	PASS	AB=0.830;AC=19;AF=0.432;AN=44;BaseQRankSum=0.573;DP=535;FS=0.955;HRun=0;HaplotypeScore=85.3421;InbreedingCoeff=0.2627;MQ=70.54;MQ0=8;MQRankSum=0.785;QD=4.15;ReadPosRankSum=-0.988;VQSLOD=2.4576;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:34:2.84:0,3,14	0/1:11,0:11:37.22:37,0,53	./.	./.	./.	0/0:14,0:15:14.86:0,15,136	0/0:22,0:22:8.98:0,9,84	./.	0/0:17,0:17:9.02:0,9,97	1/1:18,0:18:21.89:192,22,0	1/1:12,0:12:8.92:122,9,0	1/1:9,7:17:3.01:44,3,0	1/1:14,0:14:8.88:80,9,0	0/0:16,0:17:14.79:0,15,107	0/1:9,1:10:26.22:38,0,26	0/1:9,2:11:26.60:38,0,27	0/1:13,0:26:42.97:130,0,43	0/0:21,0:24:9.14:0,9,145	0/0:13,0:13:3.01:0,3,32	0/0:12,0:12:4.10:0,4,86	0/0:32,0:32:6.31:0,6,47	1/1:15,0:15:3.01:43,3,0	1/1:17,0:17:5.97:46,6,0	0/1:32,15:50:9.83:285,0,10	1/1:14,1:22:3:26,3,0	./.	0/0:11,0:11:8.48:0,8,78	./.
chr10	72967106	.	G	GCACA	1784.24	PASS	AB=0.863;AC=19;AF=0.365;AN=52;BaseQRankSum=1.776;DP=500;FS=2.310;HRun=0;HaplotypeScore=112.9355;InbreedingCoeff=0.6116;MQ=65.22;MQ0=14;MQRankSum=-2.038;QD=8.04;ReadPosRankSum=-1.320;VQSLOD=2.3577;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:22:0:1,0,0	0/0:9,0:12:13.28:0,13,174	./.	0/1:32,0:18:0:0,0,0	0/0:8,0:10:14.99:0,15,171	0/0:15,0:16:21.06:0,21,314	0/0:24,0:29:36.09:0,36,489	0/0:26,0:25:18.01:0,18,258	0/0:9,0:13:7.05:0,7,171	0/1:7,2:13:77.51:160,0,78	1/1:3,4:8:2.85:71,3,0	1/1:20,0:24:9.03:150,9,0	1/1:13,0:13:15.99:237,16,0	0/0:19,0:23:20.70:0,21,422	0/0:14,0:16:24.06:0,24,342	0/0:6,0:7:15.04:0,15,214	0/1:15,15:36:0.49:807,0,0	1/1:8,0:10:12.04:205,12,0	0/0:14,0:15:16.77:0,17,243	0/1:10,0:10:27.72:28,0,175	0/0:28,0:29:33.10:0,33,484	./.	1/1:9,0:9:0.47:1,0,0	1/1:29,0:33:9.27:124,9,0	1/1:3,4:10:11.51:168,12,0	0/0:8,0:11:17.95:0,18,242	0/0:9,0:11:23.09:0,23,300	0/0:14,0:14:27.09:0,27,428
chr10	72968036	.	GGA	G	1448.66	PASS	AB=0.905;AC=24;AF=0.462;AN=52;BaseQRankSum=-0.770;DP=551;FS=6.239;HRun=0;HaplotypeScore=102.5887;InbreedingCoeff=0.0527;MQ=63.74;MQ0=11;MQRankSum=1.742;QD=3.96;ReadPosRankSum=0.291;VQSLOD=2.1591;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:28:13.74:14,0,18	0/1:13,0:13:22.73:23,0,40	./.	./.	0/0:14,0:14:5.79:0,6,48	0/0:16,4:20:15.42:0,15,142	0/1:28,3:31:8.35:215,0,8	0/0:19,0:19:1.02:0,1,28	1/1:14,8:23:10.24:190,10,0	0/1:23,0:23:0.40:0,0,121	0/0:10,0:12:3.95:0,4,47	0/0:21,0:20:1.06:0,1,42	0/0:7,0:7:5.78:0,6,37	1/1:6,7:14:18:176,18,0	0/1:17,11:29:15.37:76,0,15	1/1:17,3:21:23.60:212,24,0	0/1:28,0:30:36.91:37,0,53	0/0:15,0:15:23.88:0,24,224	1/1:16,3:18:5.59:61,6,0	0/1:18,1:23:32.73:82,0,33	1/1:22,4:24:14.89:161,15,0	0/0:17,0:17:2.18:0,2,25	0/0:15,0:13:3:0,3,25	1/1:13,0:11:0.47:1,0,0	0/1:14,0:15:16.87:22,0,17	0/1:17,7:23:26.55:78,0,27	1/1:16,2:17:20.25:153,20,0	0/1:10,2:12:19.94:106,0,20
chr10	72968077	.	GAC	G	1357.15	PASS	AB=0.941;AC=26;AF=0.500;AN=52;BaseQRankSum=9.723;DP=595;FS=45.244;HRun=0;HaplotypeScore=128.2432;InbreedingCoeff=-0.2240;MQ=45.04;MQ0=41;MQRankSum=-0.467;QD=3.11;ReadPosRankSum=1.060;VQSLOD=1.1775;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:27:44.02:379,44,0	0/1:8,6:14:39.48:39,0,109	./.	./.	0/1:20,0:17:0.16:0,0,136	0/0:18,0:16:0.05:0,0,179	0/1:39,0:37:71.23:71,0,366	0/0:34,0:29:12.94:0,13,170	0/1:25,0:25:27.26:27,0,204	0/1:30,1:30:99:173,0,309	0/1:14,1:13:6.93:7,0,87	1/1:19,0:16:17.89:122,18,0	1/1:8,0:7:8.07:38,8,0	0/0:21,0:21:0.14:0,0,166	0/0:27,0:26:13.24:0,13,224	0/1:18,2:19:33.65:34,0,113	0/1:29,2:30:99:126,0,276	0/1:18,0:18:49.64:50,0,124	0/0:26,0:20:0.78:0,1,173	0/1:27,1:25:27.08:27,0,186	0/1:29,1:23:84.55:85,0,149	1/1:10,0:10:5.60:49,6,0	1/1:18,0:15:2.99:25,3,0	1/1:19,0:17:2.92:18,3,0	0/1:21,1:22:57.18:57,0,174	0/0:33,0:31:27.75:0,28,327	0/1:23,1:23:67.26:67,0,171	0/1:11,2:12:89.67:114,0,90
chr10	72968081	.	GAGAC	G	632.55	PASS	AB=0.960;AC=12;AF=0.231;AN=52;BaseQRankSum=10.201;DP=600;FS=13.645;HRun=0;HaplotypeScore=147.2652;InbreedingCoeff=0.4029;MQ=44.73;MQ0=42;MQRankSum=-1.526;QD=3.74;ReadPosRankSum=-1.205;VQSLOD=1.7953;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:29:39.08:313,39,0	0/1:12,0:12:8.60:9,0,282	./.	./.	0/0:18,0:16:13.15:0,13,451	0/1:18,0:16:7.17:7,0,360	0/0:43,0:41:69.72:0,70,1335	0/0:42,0:35:95.28:0,95,1355	0/0:24,0:24:25.36:0,25,891	0/0:31,0:30:70.45:0,70,1118	0/0:13,0:12:0.17:0,0,196	1/1:18,0:15:16.30:129,16,0	0/1:8,0:7:4.64:5,0,7	0/0:21,0:21:42.58:0,43,761	0/0:27,0:26:46.96:0,47,815	0/0:18,0:17:36.06:0,36,642	0/0:31,0:30:28.65:0,29,985	0/1:11,5:16:74.26:289,0,74	0/0:29,0:22:64.78:0,65,918	0/0:26,0:22:32.32:0,32,623	0/0:32,0:26:44.06:0,44,775	0/0:8,0:8:0.47:0,0,1	0/1:19,0:16:0:0,0,0	1/1:18,0:17:2.94:19,3,0	0/0:22,0:22:26.36:0,26,641	0/0:33,0:31:69.61:0,70,1434	0/1:24,0:23:3.49:3,0,770	0/0:13,0:12:20.08:0,20,302
chr10	72968087	.	GAGAC	G	492.37	PASS	AB=0.975;AC=10;AF=0.192;AN=52;BaseQRankSum=9.996;DP=617;FS=2.205;HRun=0;HaplotypeScore=154.5728;InbreedingCoeff=0.5853;MQ=45.00;MQ0=40;MQRankSum=-1.530;QD=3.82;ReadPosRankSum=-0.083;VQSLOD=2.8165;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:27:32.65:282,33,0	0/0:14,0:14:16.52:0,17,420	./.	./.	0/0:20,0:18:6.14:0,6,529	0/0:17,0:15:0.46:0,0,341	0/0:45,0:43:89.30:0,89,1491	0/0:45,0:38:99:0,102,1608	0/0:22,0:22:44.18:0,44,892	0/0:29,0:28:78.07:0,78,1373	0/0:13,0:12:17.94:0,18,256	1/1:16,3:16:23.27:200,23,0	0/1:11,0:10:4.18:4,0,8	0/0:19,0:19:39.60:0,40,778	0/0:27,0:26:54.16:0,54,954	0/0:19,0:18:42.13:0,42,806	0/0:31,0:30:54.46:0,54,1123	0/1:19,0:19:83.77:123,0,84	0/0:28,0:22:62.33:0,62,1037	0/0:29,0:25:48.16:0,48,871	0/0:36,0:30:44.94:0,45,956	0/1:8,0:7:0.01:0,0,0	0/1:16,2:15:0:0,0,0	1/1:19,2:20:2.76:17,3,0	0/0:22,0:22:38.61:0,39,734	0/0:32,0:31:89.16:0,89,1608	0/0:24,0:23:16.28:0,16,969	0/0:13,0:12:20.44:0,20,329
chr10	72968095	.	GAC	G	712.55	PASS	AB=0.867;AC=8;AF=0.148;AN=54;BaseQRankSum=11.164;DP=620;FS=2.574;HRun=0;HaplotypeScore=124.4448;InbreedingCoeff=0.6657;MQ=45.53;MQ0=40;MQRankSum=-3.419;QD=6.54;ReadPosRankSum=-1.375;VQSLOD=2.9185;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:28:44.17:345,44,0	0/0:12,0:12:20.76:0,21,438	0/0:6,0:1:2.99:0,3,23	0/0:10,0:1:0.47:0,0,1	0/0:21,0:19:33.08:0,33,564	0/0:14,0:12:20.96:0,21,368	0/0:37,0:35:78.13:0,78,1424	0/0:44,0:38:99:0,111,1850	0/0:22,0:22:37.56:0,38,846	0/0:30,0:29:87.12:0,87,1333	0/0:13,0:12:7.20:0,7,243	1/1:18,1:16:24.78:191,25,0	1/1:12,1:12:22.93:162,23,0	0/0:20,0:20:45.12:0,45,761	0/0:30,0:29:63.11:0,63,1018	0/0:20,0:20:45.12:0,45,764	0/0:32,0:31:15:0,15,949	0/1:14,8:22:81.05:149,0,81	0/0:31,0:25:75.02:0,75,1116	0/0:29,0:25:51.17:0,51,941	0/0:33,0:27:59.58:0,60,1050	./.	0/0:13,0:11:0.62:0,1,2	0/1:21,0:20:0.14:13,0,0	0/0:22,0:22:42.14:0,42,795	0/0:31,0:30:89.83:0,90,1544	0/0:27,0:26:45.78:0,46,961	0/0:11,0:10:5.94:0,6,275
chr10	72968105	.	GAGAC	G	41.39	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=6.064;DP=619;FS=0.961;HRun=0;HaplotypeScore=138.5426;InbreedingCoeff=0.4877;MQ=47.55;MQ0=43;MQRankSum=-2.546;QD=0.48;ReadPosRankSum=-2.101;VQSLOD=2.4416;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:25:46.79:0,47,396	0/0:12,0:12:21.41:0,21,412	0/0:12,0:5:11.97:0,12,136	0/0:18,0:6:4.68:0,5,74	0/0:19,0:17:39.13:0,39,718	0/0:13,0:11:24.08:0,24,416	0/0:35,0:33:75.25:0,75,1362	0/0:43,0:37:99:0,102,1450	0/0:24,0:24:54.18:0,54,1027	0/0:26,0:25:69.01:0,69,1226	0/0:13,0:12:18.06:0,18,317	1/1:17,2:16:11.41:110,11,0	0/1:13,0:12:18.61:19,0,25	0/0:16,0:16:36.59:0,37,719	0/0:29,0:28:58.08:0,58,1007	0/0:20,0:20:54.05:0,54,931	0/0:31,0:30:69.02:0,69,1285	0/1:21,0:21:13.02:13,0,232	0/0:30,0:23:67.76:0,68,1077	0/0:30,0:26:48.16:0,48,899	0/0:42,0:36:87.18:0,87,1439	0/0:6,0:5:0.47:0,0,1	1/1:11,1:10:1.72:6,2,0	1/1:20,2:22:0.71:13,1,0	0/0:21,0:21:48.16:0,48,875	0/0:28,0:27:72.19:0,72,1391	0/0:25,0:24:26.86:0,27,981	0/0:7,0:6:9.02:0,9,192
chr10	72968117	.	CAG	C	899.13	PASS	AB=0.600;AC=9;AF=0.161;AN=56;BaseQRankSum=7.831;DP=655;FS=4.926;HRun=0;HaplotypeScore=121.0915;InbreedingCoeff=0.8948;MQ=54.57;MQ0=35;MQRankSum=-6.024;QD=11.83;ReadPosRankSum=1.884;VQSLOD=3.4022;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:26:48.16:0,48,845	0/0:9,0:9:23.75:0,24,383	0/0:22,0:12:36.06:0,36,531	0/0:32,0:19:33.05:0,33,475	0/0:20,0:19:48.15:0,48,817	0/0:15,0:13:30.09:0,30,501	0/0:37,0:35:90.31:0,90,1590	0/0:39,0:34:99:0,99,1589	0/0:25,0:25:60.18:0,60,1011	0/0:28,0:27:72.24:0,72,1211	0/0:12,0:11:27.07:0,27,417	1/1:5,13:15:32.90:450,33,0	1/1:1,13:13:30.08:392,30,0	0/0:16,0:16:33.11:0,33,585	0/0:33,0:32:72.25:0,72,1267	0/0:21,0:21:54.18:0,54,942	0/0:32,0:31:77.85:0,78,1313	0/0:24,0:24:54.47:0,54,665	0/0:30,0:24:66.16:0,66,1028	0/0:29,0:26:54.18:0,54,948	0/0:46,0:40:99:0,108,1800	0/1:3,6:8:0:0,0,0	1/1:3,8:10:6.02:82,6,0	1/1:5,19:24:8.72:123,9,0	0/0:20,0:20:54.16:0,54,901	0/0:29,0:28:75.21:0,75,1226	0/0:25,0:25:57.17:0,57,962	0/0:6,0:5:9.03:0,9,160
chr10	72969027	.	GT	G	1291.48	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=8.126;DP=577;FS=8.741;HRun=7;HaplotypeScore=59.8741;InbreedingCoeff=0.7790;MQ=72.10;MQ0=0;MQRankSum=-0.508;QD=17.22;ReadPosRankSum=1.630;VQSLOD=2.9494;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:72.16:734,72,0	0/0:9,0:9:24.08:0,24,302	0/0:28,0:24:27.73:0,28,478	0/1:22,0:19:12.15:12,0,199	0/0:21,0:21:57.18:0,57,717	0/0:22,0:22:66.21:0,66,830	0/0:19,0:19:54.13:0,54,661	0/0:30,0:30:69.22:0,69,868	0/0:21,0:21:60.19:0,60,755	0/0:23,0:23:66.21:0,66,828	0/0:21,0:21:60.14:0,60,732	0/0:27,0:27:72.22:0,72,893	0/0:18,0:18:50.99:0,51,618	0/0:12,0:12:36.11:0,36,441	0/0:15,0:15:39.12:0,39,490	0/0:14,0:14:39.09:0,39,453	0/0:25,0:25:69.21:0,69,853	1/1:0,23:23:66.15:673,66,0	0/0:16,0:16:39.12:0,39,490	0/0:31,0:31:84.24:0,84,1030	0/0:18,0:18:51.15:0,51,629	0/0:20,0:20:57.18:0,57,713	0/0:24,0:24:69.21:0,69,854	0/0:26,0:26:72.22:0,72,894	0/0:21,0:21:51.14:0,51,617	0/0:20,0:20:51.15:0,51,630	0/0:17,0:17:42.12:0,42,514	0/0:4,0:4:12.04:0,12,151
chr10	72970032	.	TTGTGTG	T	1916.28	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.925;DP=835;FS=1.967;HRun=0;HaplotypeScore=220.8325;InbreedingCoeff=0.8942;MQ=60.37;MQ0=11;MQRankSum=-8.855;QD=12.36;ReadPosRankSum=0.814;VQSLOD=2.8198;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:31:12.84:160,13,0	0/0:9,0:11:23.28:0,23,682	0/0:38,0:22:7.27:0,7,132	0/0:28,1:16:3.48:0,3,88	0/0:22,0:25:39.13:0,39,1068	0/0:24,0:25:39.13:0,39,1113	0/0:24,0:24:39.12:0,39,1080	0/0:27,0:26:21.06:0,21,471	0/0:33,0:38:66.22:0,66,1620	1/1:26,7:36:10.79:551,11,0	1/1:2,8:11:15.05:288,15,0	0/0:43,0:47:40.38:0,40,473	0/0:28,0:31:7.73:0,8,243	0/0:29,0:31:52.05:0,52,1385	0/0:34,0:39:54.18:0,54,1506	0/0:31,0:41:71.50:0,72,2265	1/1:19,13:32:15.05:308,15,0	1/1:18,0:19:12.04:246,12,0	0/0:25,0:25:26.12:0,26,708	0/0:14,0:17:27.09:0,27,643	0/0:60,0:65:56.92:0,57,2253	0/0:26,0:28:20.64:0,21,445	0/0:21,0:22:9.21:0,9,147	0/0:39,0:44:24.01:0,24,406	1/1:9,14:26:15.38:540,15,0	0/0:31,0:36:60.17:0,60,1265	0/0:9,0:12:24.97:0,25,562	0/0:16,0:21:38.32:0,38,955
chr10	72970036	.	G	GTA	1957.44	PASS	AB=0.970;AC=7;AF=0.125;AN=56;BaseQRankSum=5.376;DP=869;FS=2.323;HRun=0;HaplotypeScore=182.5353;InbreedingCoeff=0.6946;MQ=58.26;MQ0=15;MQRankSum=0.557;QD=11.45;ReadPosRankSum=4.275;VQSLOD=3.2051;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:59.28:0,59,453	0/0:11,0:11:26.95:0,27,302	0/0:41,0:20:48.49:0,48,507	0/0:35,0:15:25.57:0,26,270	0/0:23,0:23:60.03:0,60,675	0/0:26,0:26:47.89:0,48,681	0/0:28,0:28:63.29:0,63,721	0/0:27,0:26:75.69:0,76,652	0/0:41,0:41:69.04:0,69,1042	0/0:34,0:34:98.88:0,99,821	0/0:11,0:11:20.86:0,21,152	1/1:49,0:49:40.60:662,41,0	1/1:28,1:29:39.83:453,40,0	0/0:29,0:29:80.58:0,81,865	0/0:41,0:40:99:0,108,1110	0/0:46,0:46:99:0,123,1381	0/0:30,0:30:52.56:0,53,405	0/0:18,0:18:53.74:0,54,422	0/0:27,0:25:71.88:0,72,708	0/0:22,0:22:24.84:0,25,383	0/0:78,0:78:99:0,138,1535	0/1:29,0:29:28.98:289,0,29	0/1:21,1:21:0.93:213,0,1	0/1:40,2:42:0.18:483,0,0	0/0:25,0:25:41.70:0,42,303	0/0:38,0:38:99:0,109,1064	0/0:14,0:14:22.30:0,22,309	0/0:21,0:21:57.44:0,57,590
chr10	72970077	.	AGT	A	3120.88	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.826;DP=876;FS=0.401;HRun=0;HaplotypeScore=167.9073;InbreedingCoeff=0.9976;MQ=52.95;MQ0=28;MQRankSum=0.643;QD=21.98;ReadPosRankSum=-0.109;VQSLOD=4.0089;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:72.24:0,72,1187	0/0:16,0:16:42.14:0,42,709	0/0:58,0:14:33.39:0,33,564	0/0:61,0:16:32.04:0,32,439	0/0:22,0:22:54.18:0,54,906	0/0:22,0:22:54.18:0,54,898	0/0:34,1:35:57.30:0,57,1498	0/0:32,0:31:72.24:0,72,1216	0/0:39,0:39:99:0,108,1784	0/0:26,0:26:63.21:0,63,1056	0/0:15,0:15:39.13:0,39,660	1/1:11,25:36:74.17:854,74,0	1/1:6,23:29:74.28:917,74,0	0/0:32,0:32:84.27:0,84,1394	0/0:36,0:36:75.26:0,75,1264	0/0:43,0:43:99:0,111,1832	0/0:34,0:34:63.21:0,63,1055	0/0:14,1:14:27.99:0,28,555	0/0:15,0:14:39.13:0,39,656	0/0:18,0:18:48.15:0,48,798	0/0:73,0:73:99:0,193,3162	1/1:8,15:23:47.48:550,47,0	1/1:8,6:13:17.73:206,18,0	1/1:6,34:40:60.50:769,61,0	0/0:34,0:34:75.26:0,75,1265	0/0:26,0:26:72.23:0,72,1199	0/0:18,0:18:53.85:0,54,871	0/0:27,0:27:77.75:0,78,1278
chr10	72970126	.	CTG	C	2243.73	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.782;DP=904;FS=5.497;HRun=0;HaplotypeScore=136.3114;InbreedingCoeff=0.9997;MQ=63.51;MQ0=2;MQRankSum=-1.153;QD=31.60;ReadPosRankSum=-0.412;VQSLOD=5.3482;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,44:51:99:1735,132,0	0/0:15,0:15:33.11:0,33,566	0/0:40,0:35:81.64:0,82,1334	0/0:38,0:30:49.47:0,49,1085	0/0:20,0:20:60.21:0,60,1029	0/0:27,0:27:78.27:0,78,1328	0/0:46,0:46:99:0,120,2041	0/0:36,0:36:84.28:0,84,1416	0/0:43,0:43:99:0,117,1956	0/0:32,0:32:87.29:0,87,1453	0/0:12,0:12:33.11:0,33,553	0/0:37,0:37:93.30:0,93,1550	0/0:26,0:26:78.27:0,78,1327	0/0:32,0:32:87.30:0,87,1492	0/0:37,0:37:99:0,108,1852	0/0:34,0:34:87.30:0,87,1488	0/0:34,0:34:68.72:0,69,1139	1/1:1,19:20:48.16:631,48,0	0/0:18,0:18:48.14:0,48,794	0/0:23,0:24:66.17:0,66,1073	0/0:98,0:96:99:0,262,4375	0/0:28,0:28:72.22:0,72,1205	0/0:20,0:20:57.20:0,57,978	0/0:48,0:48:99:0,109,1791	0/0:23,0:23:54.16:0,54,893	0/0:27,0:27:78.27:0,78,1332	0/0:15,0:15:45.15:0,45,772	0/0:22,0:22:54.18:0,54,926
chr10	72970542	.	TG	T	2254	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=12.133;DP=702;FS=5.244;HRun=4;HaplotypeScore=74.3147;InbreedingCoeff=0.9994;MQ=68.50;MQ0=0;MQRankSum=-2.966;QD=32.20;ReadPosRankSum=0.020;VQSLOD=4.0957;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,59:60:99:2016,169,0	0/0:10,0:10:30.10:0,30,420	0/0:27,0:26:69.16:0,69,906	0/0:24,0:22:63.20:0,63,853	0/0:28,0:28:84.27:0,84,1154	0/0:22,0:22:63.21:0,63,882	0/0:32,0:32:93.28:0,93,1268	0/0:35,0:35:90.28:0,90,1220	0/0:22,0:22:63.20:0,63,865	0/0:25,0:25:72.24:0,72,1002	0/0:15,0:15:42.13:0,42,570	0/0:27,0:27:81.27:0,81,1134	0/0:29,0:29:80.83:0,81,1134	0/0:23,0:23:69.23:0,69,966	0/0:22,0:22:48.16:0,48,672	0/0:18,0:18:51.17:0,51,714	0/0:25,0:25:72.22:0,72,990	1/1:0,10:10:30.09:360,30,0	0/0:17,0:17:42.14:0,42,588	0/0:31,0:31:84.28:0,84,1170	0/0:31,0:31:90.28:0,90,1238	0/0:33,0:33:87.28:0,87,1198	0/0:20,0:20:48.16:0,48,665	0/0:25,0:25:75.24:0,75,1033	0/0:21,0:21:60.19:0,60,823	0/0:22,0:22:63.21:0,63,881	0/0:33,0:33:99:0,99,1371	0/0:15,0:15:42.14:0,42,588
chr10	72970873	.	C	CT	1211.92	PASS	AB=0.900;AC=5;AF=0.089;AN=56;BaseQRankSum=-6.955;DP=634;FS=3.227;HRun=11;HaplotypeScore=69.9050;InbreedingCoeff=0.7381;MQ=70.11;MQ0=1;MQRankSum=1.012;QD=13.47;ReadPosRankSum=0.889;VQSLOD=3.9681;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,46:63:53.37:1071,53,0	0/1:8,1:9:6.58:7,0,133	0/0:19,0:16:8.92:0,9,75	0/0:16,0:14:15.57:0,16,122	0/0:26,1:28:40.10:0,40,465	0/0:20,0:20:50.78:0,51,391	0/0:24,1:25:17.26:0,17,412	0/0:21,0:21:44.31:0,44,341	0/0:20,1:23:30.40:0,30,398	0/0:22,0:23:61.27:0,61,463	0/0:13,0:13:31.92:0,32,238	0/0:25,0:26:46.79:0,47,354	0/0:18,0:18:41.83:0,42,325	0/0:18,0:18:44.73:0,45,339	0/0:27,0:29:75.78:0,76,567	0/0:21,1:22:32.38:0,32,431	0/0:24,0:24:56.72:0,57,437	1/1:6,12:18:6.91:251,7,0	0/0:32,0:32:74.65:0,75,578	0/0:26,0:27:52.76:0,53,400	0/0:15,0:15:32.82:0,33,252	0/0:16,0:16:35.76:0,36,271	0/0:18,0:18:32.82:0,33,252	0/0:24,0:25:61.72:0,62,462	0/0:18,0:18:47.77:0,48,365	0/0:27,0:28:70.77:0,71,540	0/0:23,0:23:62.76:0,63,488	0/0:15,0:17:33.94:0,34,244
chr10	72973174	.	C	CT	3962.46	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-13.104;DP=697;FS=9.639;HRun=6;HaplotypeScore=66.1001;InbreedingCoeff=0.9845;MQ=77.88;MQ0=0;MQRankSum=-1.032;QD=31.96;ReadPosRankSum=1.482;VQSLOD=3.8112;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,111,1132	0/0:5,0:5:12.03:0,12,122	0/0:27,0:27:64.87:0,65,625	0/0:17,0:17:11.40:0,11,419	0/0:21,0:21:57.09:0,57,571	0/0:25,0:25:69.13:0,69,691	0/0:12,0:12:36.08:0,36,367	0/0:27,0:27:66.12:0,66,661	0/0:22,0:22:60.11:0,60,605	0/0:26,0:26:75.17:0,75,765	0/0:34,0:34:93.19:0,93,941	1/1:1,24:25:69.22:868,69,0	1/1:3,32:35:87.28:1094,87,0	0/0:24,0:24:57.12:0,57,581	0/0:34,0:34:93.19:0,93,944	0/0:28,0:28:78.16:0,78,789	0/0:34,0:34:99:0,99,1002	0/0:31,0:31:81.18:0,81,826	0/0:31,0:31:90.19:0,90,912	0/0:23,0:23:54.11:0,54,551	0/0:26,0:26:75.15:0,75,758	1/1:1,15:16:42.13:528,42,0	1/1:2,20:22:54.03:679,54,0	1/1:3,23:26:63.20:793,63,0	0/0:26,0:26:72.15:0,72,729	0/0:22,0:22:57.12:0,57,582	0/0:25,0:25:72.13:0,72,719	0/0:12,0:12:27.04:0,27,267
chr10	72973635	.	A	ACAGG	970.13	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.953;DP=526;FS=1.073;HRun=0;HaplotypeScore=94.0335;InbreedingCoeff=0.7037;MQ=58.10;MQ0=3;MQRankSum=-0.692;QD=17.97;ReadPosRankSum=2.236;VQSLOD=2.9857;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,6:27:3.01:72,3,0	0/0:5,0:5:15.02:0,15,192	0/0:19,0:15:8.98:0,9,74	0/0:18,0:16:12.02:0,12,135	0/0:16,0:15:15.03:0,15,215	0/0:24,0:24:40.91:0,41,599	0/0:21,0:21:27.05:0,27,342	0/0:20,0:20:21.03:0,21,223	0/0:11,0:11:15.01:0,15,169	0/0:14,0:14:9.02:0,9,121	0/0:14,0:14:8.99:0,9,116	0/0:12,0:12:24.08:0,24,383	0/0:22,0:22:33.09:0,33,480	0/0:19,0:19:42.09:0,42,578	0/0:23,0:23:45.09:0,45,623	0/0:19,0:19:36.10:0,36,529	0/0:31,0:31:29.07:0,29,552	1/1:10,17:27:42.07:1007,42,0	0/0:15,0:14:9.03:0,9,144	0/0:11,0:11:6:0,6,72	0/0:41,0:41:54.13:0,54,763	0/0:12,0:12:30.09:0,30,455	0/0:16,0:16:11.89:0,12,144	0/0:27,0:27:51.14:0,51,767	0/0:18,0:18:23.73:0,24,337	0/0:18,0:18:18.04:0,18,244	0/0:15,0:15:27.06:0,27,384	0/0:11,0:10:18.06:0,18,287
chr10	72973781	.	A	AT	1457.45	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.463;DP=532;FS=1.963;HRun=7;HaplotypeScore=50.6910;InbreedingCoeff=0.9780;MQ=68.46;MQ0=0;MQRankSum=-1.708;QD=27.50;ReadPosRankSum=2.635;VQSLOD=4.3617;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,22:28:63.19:761,63,0	0/0:9,0:9:21:0,21,195	0/0:7,0:7:19.42:0,19,163	0/0:10,0:10:12.01:0,12,111	0/0:33,0:33:96.10:0,96,907	0/0:23,0:23:66.07:0,66,626	0/0:12,0:12:30.03:0,30,284	0/0:39,0:39:99:0,105,1014	0/0:16,0:16:48.06:0,48,458	0/0:19,0:19:45.07:0,45,435	0/0:29,0:29:75.11:0,75,720	0/0:13,0:13:33.05:0,33,318	0/0:11,0:11:30:0,30,273	0/0:12,0:12:33.05:0,33,319	0/0:13,0:13:30.03:0,30,286	0/0:14,0:14:36.03:0,36,338	0/0:33,0:33:90.12:0,90,864	1/1:2,23:25:69.18:818,69,0	0/0:16,0:16:39.03:0,39,364	0/0:27,0:27:75.08:0,75,708	0/0:17,0:17:39.06:0,39,376	0/0:16,0:16:39.06:0,39,377	0/0:22,0:22:63.09:0,63,604	0/0:16,0:16:45:0,45,423	0/0:23,0:23:66.10:0,66,634	0/0:14,0:14:36.04:0,36,348	0/0:21,0:20:51.03:0,51,475	0/0:14,0:14:42.05:0,42,398
chr10	72975986	.	G	GGACA	2326.90	PASS	AB=0.856;AC=8;AF=0.154;AN=52;BaseQRankSum=-8.155;DP=571;FS=4.576;HRun=0;HaplotypeScore=109.4123;InbreedingCoeff=0.3484;MQ=65.03;MQ0=2;MQRankSum=1.514;QD=20.41;ReadPosRankSum=-0.327;VQSLOD=2.7005;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:26:13.56:0,14,112	0/0:5,0:5:3.01:0,3,46	./.	./.	0/0:26,0:26:36.09:0,36,505	0/1:11,0:11:55.26:55,0,146	0/0:22,0:23:30.06:0,30,384	0/0:23,0:23:3:0,3,46	0/0:24,0:24:42.13:0,42,628	0/0:11,0:18:15.02:0,15,140	0/0:7,0:12:9.01:0,9,84	1/1:9,16:26:45.15:1053,45,0	1/1:11,12:23:30.10:688,30,0	0/0:30,0:30:39.13:0,39,602	0/0:28,0:28:24.07:0,24,348	0/0:17,0:17:27.09:0,27,417	0/0:10,0:17:15.02:0,15,140	0/1:10,0:16:2.75:3,0,97	0/0:22,0:22:15.05:0,15,231	0/0:23,0:23:23.95:0,24,359	0/0:33,0:33:66.20:0,66,974	0/1:9,3:12:37.27:132,0,37	0/0:20,0:21:27.07:0,27,376	0/1:12,13:24:19.69:536,0,20	0/0:6,0:9:9.01:0,9,84	0/0:26,0:26:24.06:0,24,347	0/0:17,0:17:21.07:0,21,324	0/0:4,0:4:12.04:0,12,185
chr10	72976332	.	CCTCTCTCT	C	240.15	PASS	AB=0.881;AC=16;AF=0.471;AN=34;BaseQRankSum=1.842;DP=607;FS=2.251;HRun=0;HaplotypeScore=136.5766;InbreedingCoeff=0.2595;MQ=76.18;MQ0=35;MQRankSum=-0.171;QD=1.39;ReadPosRankSum=-0.817;VQSLOD=2.0205;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:11.94:0,12,90	0/0:10,0:10:3:0,3,25	./.	./.	./.	1/1:22,0:21:1.25:3,1,0	0/0:21,0:21:3:0,3,25	0/0:43,0:42:4.46:0,4,11	1/1:21,0:22:2.94:18,3,0	0/1:18,0:18:24.28:24,0,43	./.	0/0:19,0:19:3.07:0,3,25	0/0:10,0:10:0.47:0,0,1	./.	./.	1/1:8,0:11:5.38:40,5,0	1/1:16,4:18:3.01:74,3,0	0/0:20,0:19:1.82:0,2,5	0/0:20,0:20:3:0,3,27	1/1:10,0:10:3:28,3,0	1/1:30,0:28:5.85:75,6,0	./.	./.	./.	./.	1/1:24,0:23:4.25:13,4,0	0/1:11,5:16:14.85:78,0,15	./.
chr10	72976422	.	T	TAC	3478.37	PASS	AB=0.636;AC=17;AF=0.304;AN=56;BaseQRankSum=-6.442;DP=623;FS=10.684;HRun=0;HaplotypeScore=89.2766;InbreedingCoeff=0.9038;MQ=52.97;MQ0=23;MQRankSum=2.138;QD=22.44;ReadPosRankSum=2.919;VQSLOD=3.8002;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:63.19:0,63,770	0/0:4,0:4:12.04:0,12,147	0/0:61,0:14:21.47:0,21,204	0/0:72,0:18:18.35:0,18,171	0/0:12,0:12:30.08:0,30,355	0/0:17,0:17:38.15:0,38,446	0/0:19,0:19:39.09:0,39,476	0/0:29,0:29:51.04:0,51,593	0/0:26,0:27:62.70:0,63,720	1/1:8,10:18:30.40:575,30,0	0/1:3,4:7:3.46:89,0,3	1/1:3,20:23:39.13:631,39,0	1/1:1,13:14:24.08:385,24,0	0/0:14,0:15:39.43:0,39,455	0/0:18,0:18:35.82:0,36,439	0/0:17,0:17:48.14:0,48,574	1/1:5,19:24:33.11:534,33,0	0/0:28,0:28:43.71:0,44,644	0/0:23,1:22:6.99:0,7,547	0/0:13,0:13:33.09:0,33,391	0/0:30,0:28:22.76:0,23,693	1/1:3,6:9:8.97:145,9,0	1/1:6,5:11:12.04:195,12,0	1/1:7,24:31:30.10:487,30,0	1/1:2,14:16:27.09:438,27,0	0/0:16,0:17:34.15:0,34,368	0/0:19,0:20:56.98:0,57,650	0/0:5,0:5:15.05:0,15,182
chr10	72977098	.	C	CTG	6118.94	PASS	AB=0.706;AC=20;AF=0.357;AN=56;BaseQRankSum=-5.438;DP=652;FS=2.807;HRun=0;HaplotypeScore=91.7960;InbreedingCoeff=0.6218;MQ=65.58;MQ0=4;MQRankSum=-0.809;QD=22.09;ReadPosRankSum=0.106;VQSLOD=4.7380;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:29:20.03:163,20,0	0/0:7,0:7:15.05:0,15,178	0/0:40,0:25:31.88:0,32,341	0/0:31,0:20:32.63:0,33,352	0/0:27,0:27:57.16:0,57,664	0/0:18,0:18:39.12:0,39,462	0/0:19,0:19:39.12:0,39,462	0/0:25,0:25:21.05:0,21,240	0/0:27,0:27:48.15:0,48,568	1/1:8,17:24:14.96:715,15,0	1/1:8,14:22:42.14:666,42,0	0/1:10,13:23:88.02:600,0,88	1/1:12,16:28:48.16:760,48,0	0/0:23,0:24:63.02:0,63,724	0/0:21,0:22:50.96:0,51,569	0/0:20,0:21:50.97:0,51,572	0/1:11,8:19:44.02:306,0,44	1/1:7,0:17:26.99:237,27,0	0/0:15,0:15:30.08:0,30,346	0/0:23,0:24:63.01:0,63,714	0/0:31,1:31:12.63:0,13,617	1/1:3,25:28:64.44:1036,64,0	0/1:6,11:19:28.98:502,0,29	1/1:12,12:24:0.43:487,0,0	1/1:10,17:27:17.48:594,17,0	0/1:14,2:16:53.05:53,0,373	0/0:33,1:35:24.50:0,24,748	0/0:5,0:7:5.85:0,6,50
chr10	72977157	.	CATAG	C	2617.82	PASS	AB=0.800;AC=13;AF=0.232;AN=56;BaseQRankSum=8.398;DP=562;FS=1.681;HRun=0;HaplotypeScore=139.5782;InbreedingCoeff=0.8639;MQ=69.13;MQ0=1;MQRankSum=0.690;QD=18.18;ReadPosRankSum=4.027;VQSLOD=3.6227;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,16:25:39.13:608,39,0	0/0:7,0:7:21.06:0,21,464	0/0:24,0:20:12.04:0,12,217	0/0:12,0:10:7.43:0,7,174	0/0:22,0:22:51.18:0,51,1218	0/0:17,0:17:36.09:0,36,748	0/0:23,0:23:51.11:0,51,983	0/0:32,0:32:57.16:0,57,1170	0/0:31,0:31:66.21:0,66,1514	0/0:12,0:18:34.07:0,34,475	0/0:12,0:17:17.98:0,18,202	1/1:9,8:17:30.07:413,30,0	1/1:7,10:17:27.04:350,27,0	0/0:26,0:26:60.21:0,60,1428	0/0:26,1:27:11.03:0,11,1194	0/0:20,0:20:45.14:0,45,1021	0/0:6,0:8:15.01:0,15,177	0/1:12,4:15:10.71:135,0,11	0/0:13,0:13:18.05:0,18,348	0/0:26,0:25:54.14:0,54,1123	0/0:13,0:13:30.10:0,30,732	1/1:11,12:24:33.07:451,33,0	1/1:11,9:20:27.06:385,27,0	1/1:14,11:25:30.09:464,30,0	0/0:13,0:29:29.08:0,29,299	0/0:23,0:23:57.19:0,57,1326	0/0:26,0:26:72.17:0,72,1509	0/0:4,0:4:9.03:0,9,219
chr10	72977205	.	G	GAGAT	5449.79	PASS	AB=0.832;AC=17;AF=0.304;AN=56;BaseQRankSum=-6.153;DP=575;FS=0.000;HRun=0;HaplotypeScore=126.2910;InbreedingCoeff=0.7235;MQ=55.48;MQ0=6;MQRankSum=2.171;QD=28.38;ReadPosRankSum=-1.262;VQSLOD=4.4387;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:44.97:0,45,741	0/0:13,0:13:30.09:0,30,469	0/0:24,0:10:9.03:0,9,130	0/0:14,0:8:8.86:0,9,105	0/0:26,0:26:63.18:0,63,985	0/0:12,0:12:30.10:0,30,497	0/0:25,0:25:42.14:0,42,696	0/0:32,0:32:51.17:0,51,807	0/0:27,0:27:57.13:0,57,881	1/1:14,11:25:54.16:1197,54,0	1/1:11,5:16:26.82:590,27,0	0/1:12,6:18:16.61:635,0,17	1/1:7,6:13:18.06:424,18,0	0/0:26,0:26:66.20:0,66,1057	0/0:18,0:18:33.11:0,33,539	0/0:14,0:14:36.12:0,36,588	1/1:7,5:12:27.09:606,27,0	0/0:15,0:14:30.05:0,30,459	0/0:16,0:16:24:0,24,315	0/0:30,0:29:69.24:0,69,1123	0/0:20,0:20:45.15:0,45,731	1/1:8,6:14:14.78:336,15,0	1/1:9,8:17:17.85:419,18,0	1/1:18,7:25:27.09:584,27,0	0/1:18,7:25:18.87:631,0,19	0/1:26,1:27:28.64:29,0,650	0/0:34,0:34:81.24:0,81,1281	0/0:7,0:7:15.05:0,15,249
chr10	72977266	.	TAGAA	T	4284.34	PASS	AB=0.698;AC=31;AF=0.620;AN=50;BaseQRankSum=4.788;DP=527;FS=0.000;HRun=0;HaplotypeScore=104.5642;InbreedingCoeff=0.8229;MQ=60.89;MQ0=6;MQRankSum=0.453;QD=14.23;ReadPosRankSum=-2.562;VQSLOD=4.1225;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:22:14.64:126,15,0	./.	./.	./.	0/0:32,0:32:60.19:0,60,1313	0/0:19,0:19:30.04:0,30,560	0/0:13,0:13:15.52:0,16,304	0/0:29,0:24:0:0,0,0	0/0:12,0:27:27.07:0,27,412	1/1:23,1:23:24.02:286,24,0	1/1:14,3:17:30.07:416,30,0	1/1:15,0:15:18.01:209,18,0	1/1:14,2:16:33.01:433,33,0	0/0:14,0:14:21.07:0,21,444	0/0:19,0:18:39.13:0,39,835	0/0:18,0:18:36.10:0,36,747	1/1:16,3:19:19.23:229,19,0	1/1:14,0:15:11.60:78,12,0	1/1:9,7:16:27.04:323,27,0	1/1:14,10:24:24.08:368,24,0	0/0:20,0:20:2.11:0,2,429	1/1:9,3:12:20.98:256,21,0	1/1:9,3:12:21.01:237,21,0	1/1:21,3:24:21.07:340,21,0	1/1:11,9:20:36.11:530,36,0	1/1:11,8:18:21.03:256,21,0	0/1:21,16:37:28.75:126,0,29	1/1:8,0:7:8.97:71,9,0
chr10	72978080	.	G	GCC	1788.63	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-2.805;DP=602;FS=15.439;HRun=8;HaplotypeScore=75.0427;InbreedingCoeff=0.9896;MQ=80.68;MQ0=0;MQRankSum=-2.904;QD=22.64;ReadPosRankSum=1.547;VQSLOD=1.2188;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:81.17:0,81,882	0/0:9,0:9:21.05:0,21,234	0/0:13,0:13:27.03:0,27,282	0/0:20,0:20:42.02:0,42,448	0/0:22,0:24:56.82:0,57,672	0/0:20,0:20:57.15:0,57,636	0/0:21,0:21:51.13:0,51,568	0/0:14,0:14:33.05:0,33,356	0/0:28,0:28:81.22:0,81,903	1/1:5,15:23:38.09:512,38,0	1/1:3,12:15:33.11:523,33,0	0/0:18,0:18:42.06:0,42,449	0/0:14,0:14:39.10:0,39,434	0/0:29,0:29:78.21:0,78,869	0/0:24,0:25:54.06:0,54,660	0/0:28,0:29:78.15:0,78,927	1/1:5,2:26:38.56:390,39,0	0/0:20,0:20:54.14:0,54,602	0/0:22,0:22:57.13:0,57,626	0/0:17,0:17:51.12:0,51,559	0/0:30,0:30:84.19:0,84,925	0/0:29,0:29:75.18:0,75,834	0/0:17,0:17:42.09:0,42,464	0/0:23,0:23:54.12:0,54,602	1/1:1,13:15:33.11:524,33,0	0/0:31,2:33:30.53:0,31,769	0/0:31,0:31:95.98:0,96,1040	0/0:4,0:4:12.03:0,12,134
chr10	72979144	.	T	TAATA	1460.60	PASS	AC=14;AF=0.280;AN=50;BaseQRankSum=-2.208;DP=327;FS=3.091;HRun=0;HaplotypeScore=54.0505;InbreedingCoeff=0.7330;MQ=64.69;MQ0=0;MQRankSum=-0.418;QD=20.29;ReadPosRankSum=-0.610;VQSLOD=3.1419;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,5:13:15.05:353,15,0	0/0:5,0:5:6.02:0,6,93	./.	./.	0/0:20,0:19:18.06:0,18,280	0/0:15,0:15:30.09:0,30,445	1/1:5,0:5:3.01:59,3,0	0/0:41,0:41:21.06:0,21,287	0/0:12,0:12:12.04:0,12,176	1/1:7,4:11:12.04:279,12,0	1/1:4,4:8:12:204,12,0	0/0:14,0:14:24.08:0,24,371	0/0:9,0:9:9.01:0,9,116	0/0:6,0:6:6.02:0,6,93	0/0:10,0:13:11.99:0,12,103	0/0:9,0:9:9.03:0,9,140	1/1:9,1:13:12.04:215,12,0	1/1:7,0:11:6.02:104,6,0	0/0:13,0:13:12.04:0,12,187	0/0:12,0:12:3.01:0,3,47	0/0:10,0:10:6:0,6,70	./.	0/0:7,0:7:3.01:0,3,47	0/0:5,0:5:3.01:0,3,47	1/1:5,5:10:18.06:414,18,0	0/0:15,0:15:18.06:0,18,280	0/0:17,0:16:21.04:0,21,282	0/0:7,0:7:15.05:0,15,206
chr10	72979716	.	AG	A	2721.75	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.674;DP=695;FS=13.266;HRun=2;HaplotypeScore=66.5327;InbreedingCoeff=0.9557;MQ=86.12;MQ0=0;MQRankSum=-3.490;QD=35.81;ReadPosRankSum=2.282;VQSLOD=3.1083;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,47:47:99:1753,135,0	0/0:3,0:3:9.03:0,9,134	0/0:22,0:22:57.53:0,58,814	0/0:24,0:24:60.84:0,61,878	0/0:23,0:23:66.21:0,66,956	0/0:26,0:26:69.21:0,69,995	0/0:36,0:36:99:0,102,1484	0/0:23,0:22:66.21:0,66,943	0/0:28,0:28:81.27:0,81,1207	0/0:30,0:30:87.25:0,87,1278	0/0:15,0:15:42.14:0,42,627	0/0:19,0:19:51.17:0,51,764	0/0:21,0:21:60.19:0,60,873	0/0:28,0:28:78.22:0,78,1136	0/0:26,0:26:72.20:0,72,1054	0/0:24,0:24:72.23:0,72,1053	0/0:29,0:29:81.27:0,81,1214	1/1:0,29:29:84.27:1090,84,0	0/0:28,0:28:78.25:0,78,1138	0/0:25,0:25:69.22:0,69,1012	0/0:40,0:40:99:0,117,1751	0/0:16,0:16:48.16:0,48,719	0/0:10,0:10:30.10:0,30,450	0/0:39,0:39:99:0,111,1664	0/0:24,0:24:69.23:0,69,1034	0/0:25,0:25:69.23:0,69,1032	0/0:31,0:31:90.30:0,90,1347	0/0:4,0:4:12.04:0,12,180
chr10	72979884	.	G	GA	1049.44	PASS	AB=0.954;AC=14;AF=0.250;AN=56;BaseQRankSum=-2.728;DP=523;FS=8.079;HRun=11;HaplotypeScore=52.5754;InbreedingCoeff=0.5699;MQ=62.85;MQ0=8;MQRankSum=0.318;QD=9.13;ReadPosRankSum=1.331;VQSLOD=1.7524;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,3:30:13.77:0,14,467	0/0:4,0:4:8.96:0,9,70	0/1:13,0:9:12.76:13,0,51	0/1:10,0:5:7.75:8,0,78	0/0:31,0:33:58.12:0,58,508	0/0:15,0:15:32.87:0,33,255	0/1:11,1:13:7.51:8,0,122	0/0:29,0:29:58.57:0,59,446	0/0:16,0:16:37.88:0,38,284	0/0:15,0:14:32.85:0,33,253	0/0:17,2:19:14.38:0,14,294	1/1:0,6:6:9.02:91,9,0	1/1:2,13:16:29.89:288,30,0	0/0:12,0:12:23.90:0,24,186	0/0:18,0:17:41.83:0,42,323	0/0:18,0:18:41.83:0,42,325	0/0:26,0:26:34.78:0,35,376	0/0:23,0:26:32.41:0,32,402	0/1:14,2:16:18.96:19,0,236	0/0:24,0:24:32.11:0,32,381	0/0:17,2:19:2.37:0,2,202	1/1:3,11:14:33.07:334,33,0	1/1:3,11:14:6.72:225,7,0	1/1:5,7:12:24.04:239,24,0	0/0:20,0:22:57.83:0,58,426	0/0:27,0:26:62.73:0,63,487	0/0:34,0:33:79.38:0,79,597	0/0:21,0:20:50.78:0,51,394
chr10	72981282	.	AGCCTTGCTTCCAG	A	7545.71	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.448;DP=714;FS=9.867;HRun=0;HaplotypeScore=263.9093;InbreedingCoeff=0.9966;MQ=85.67;MQ0=0;MQRankSum=-12.656;QD=83.84;ReadPosRankSum=5.570;VQSLOD=2.7982;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,8579	0/0:8,0:8:24.08:0,24,1392	0/0:32,0:32:94.83:0,95,4525	0/0:18,0:18:48.16:0,48,2437	0/0:32,0:32:91.67:0,92,5959	0/0:21,0:21:63.22:0,63,4102	0/0:29,0:29:87.30:0,87,5850	0/0:31,0:31:93.32:0,93,5452	0/0:27,0:27:81.26:0,81,4886	0/0:25,0:25:72.25:0,72,4619	0/0:13,0:13:39.13:0,39,2233	1/1:0,17:17:48.16:2011,48,0	1/1:0,24:24:54.19:2263,54,0	0/0:29,0:29:87.30:0,87,5331	0/0:25,0:25:75.26:0,75,4892	0/0:24,0:24:72.25:0,72,4842	0/0:41,0:41:99:0,123,7773	0/0:39,0:39:99:0,117,7213	0/0:23,0:23:69.24:0,69,4141	0/0:22,0:22:66.23:0,66,4379	0/0:65,0:65:99:0,196,12031	1/1:0,17:17:27.09:1131,27,0	1/1:0,17:17:30.09:1257,30,0	1/1:0,15:15:22.83:883,23,0	0/0:22,0:22:66.23:0,66,4308	0/0:25,0:25:75.25:0,75,4643	0/0:23,0:23:69.24:0,69,4572	0/0:6,0:6:18.06:0,18,1180
chr10	72985196	.	G	GACAC	1835.92	PASS	AB=0.875;AC=19;AF=0.396;AN=48;BaseQRankSum=-0.072;DP=655;FS=19.014;HRun=0;HaplotypeScore=136.4662;InbreedingCoeff=0.5702;MQ=60.64;MQ0=6;MQRankSum=-0.747;QD=6.44;ReadPosRankSum=-1.153;VQSLOD=1.1308;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:37:15.07:214,0,15	0/0:6,0:6:9.03:0,9,140	./.	./.	./.	0/0:17,0:17:18.05:0,18,273	0/0:38,0:39:38.23:0,38,512	0/0:32,0:32:7.65:0,8,87	0/0:24,0:24:14.05:0,14,190	1/1:21,1:22:22.32:379,22,0	1/1:7,2:9:2.45:70,2,0	1/1:20,0:24:9.03:171,9,0	1/1:21,0:21:8.96:139,9,0	0/0:17,0:19:18.05:0,18,254	0/0:18,0:18:23.86:0,24,397	0/0:21,0:21:30.10:0,30,458	0/1:22,17:47:15.10:501,0,15	0/1:26,0:29:20.56:21,0,544	0/0:13,0:15:5.20:0,5,55	0/0:14,0:16:9.01:0,9,118	0/0:50,0:52:27.05:0,27,351	1/1:15,0:15:6.01:74,6,0	1/1:22,0:22:8.84:96,9,0	1/1:35,0:35:8.42:132,8,0	1/1:13,8:22:9.03:212,9,0	0/0:21,0:24:13.97:0,14,158	0/0:17,0:21:8.76:0,9,102	./.
chr10	72987134	.	ATCTC	A	930.82	PASS	AB=0.941;AC=13;AF=0.232;AN=56;BaseQRankSum=1.494;DP=646;FS=13.249;HRun=0;HaplotypeScore=121.4607;InbreedingCoeff=0.2603;MQ=75.42;MQ0=46;MQRankSum=0.684;QD=3.45;ReadPosRankSum=0.076;VQSLOD=1.6435;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:19.56:20,0,287	0/0:8,0:10:11.26:0,11,160	0/0:54,0:20:0.47:0,0,1	0/1:62,0:27:0.29:1,0,0	0/0:16,1:19:1.71:0,2,180	0/0:14,0:16:6.10:0,6,318	0/1:21,0:22:64.79:65,0,240	0/0:26,0:22:10.74:0,11,68	0/0:12,0:14:29.56:0,30,466	1/1:14,5:17:20.53:208,21,0	0/1:15,9:24:5.95:6,0,42	0/0:24,0:24:16.93:0,17,256	0/0:22,0:22:5.98:0,6,118	0/0:15,0:17:15.02:0,15,300	0/0:25,0:28:7.35:0,7,310	0/0:17,1:19:6.49:0,6,388	1/1:10,13:23:17.52:364,18,0	0/1:19,0:19:99:109,0,244	0/0:23,0:22:7.55:0,8,96	0/0:15,0:15:18.03:0,18,291	0/1:25,0:26:53.20:53,0,67	0/0:17,0:16:8.23:0,8,95	0/0:12,0:15:14.99:0,15,143	0/1:18,0:21:30.82:31,0,150	1/1:16,0:16:13.29:231,13,0	0/0:14,0:14:15:0,15,184	0/0:19,0:19:14.74:0,15,133	0/0:21,0:19:24.05:0,24,383
chr10	72987174	.	C	CTCTCTCTG	1248.41	PASS	AB=0.887;AC=17;AF=0.304;AN=56;BaseQRankSum=3.836;DP=643;FS=10.753;HRun=0;HaplotypeScore=161.9762;InbreedingCoeff=-0.1282;MQ=54.21;MQ0=45;MQRankSum=-0.149;QD=3.42;ReadPosRankSum=-1.182;VQSLOD=1.9280;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:36:16.59:437,17,0	0/0:8,0:8:12.79:0,13,243	1/1:17,0:3:3.85:23,4,0	0/1:19,0:3:10.68:11,0,22	0/1:22,0:18:40.04:40,0,161	0/1:22,0:20:0.74:1,0,358	0/0:26,0:26:4.02:0,4,438	0/0:26,0:22:28:0,28,211	0/0:18,0:18:38.80:0,39,524	0/1:22,0:17:16.70:17,0,190	0/0:19,0:18:10.69:0,11,91	0/1:10,19:29:34.31:34,0,84	0/1:7,19:28:26.90:90,0,27	0/1:17,0:16:0.32:0,0,338	0/1:27,0:27:52.97:53,0,259	0/0:28,0:27:38.44:0,38,596	0/0:27,0:27:4:0,4,530	0/1:7,0:27:15.78:149,0,16	0/0:17,0:15:23.45:0,23,210	0/0:16,0:16:36:0,36,325	0/1:28,0:27:8.03:8,0,323	0/0:10,13:26:3.23:0,3,33	0/1:22,0:22:14.83:105,0,15	0/1:26,0:25:20.87:364,0,21	0/1:14,0:17:69.79:70,0,243	0/0:23,0:23:57.07:0,57,546	0/0:20,0:20:7.02:0,7,162	0/0:21,0:20:47.95:0,48,526
chr10	72989054	.	G	GTGTT	11317.90	PASS	AB=0.555;AC=20;AF=0.357;AN=56;BaseQRankSum=-15.327;DP=711;FS=6.395;HRun=0;HaplotypeScore=103.4753;InbreedingCoeff=0.8581;MQ=71.60;MQ0=5;MQRankSum=0.998;QD=41.61;ReadPosRankSum=1.957;VQSLOD=5.2485;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,29:39:84.29:2016,84,0	0/0:9,0:9:21.07:0,21,337	0/0:42,0:31:20.92:0,21,240	0/0:31,0:29:29.46:0,29,439	0/0:15,0:15:24.06:0,24,340	0/0:22,0:23:37.16:0,37,543	0/0:32,0:32:54.14:0,54,790	0/0:35,0:35:45.11:0,45,631	0/0:12,0:12:33.11:0,33,530	1/1:10,11:22:36.12:858,36,0	1/1:6,10:16:30.06:635,30,0	1/1:6,18:25:48.16:1148,48,0	1/1:4,20:24:51.09:1226,51,0	0/0:26,0:26:48.16:0,48,770	0/0:29,0:29:66.23:0,66,1059	0/0:29,0:29:69.21:0,69,1059	1/1:5,22:27:51.04:1168,51,0	1/1:15,11:26:30.10:681,30,0	0/0:19,0:20:36.12:0,36,558	0/0:23,0:23:48.14:0,48,726	0/0:40,0:41:84.21:0,84,1234	1/1:8,13:22:36.08:793,36,0	0/1:1,7:8:27.14:360,0,27	0/1:11,30:39:6.03:1927,0,6	1/1:8,9:18:21.07:505,21,0	0/0:20,0:19:27.09:0,27,431	0/0:29,0:29:72.25:0,72,1156	0/0:23,0:23:48.12:0,48,714
chr10	72992498	.	GA	G	926.40	PASS	AB=0.955;AC=5;AF=0.089;AN=56;BaseQRankSum=9.324;DP=625;FS=17.440;HRun=11;HaplotypeScore=68.2546;InbreedingCoeff=0.7109;MQ=69.00;MQ0=0;MQRankSum=0.516;QD=9.26;ReadPosRankSum=2.168;VQSLOD=0.9155;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,29:34:71.88:591,72,0	0/0:10,0:10:27.07:0,27,288	0/0:34,1:20:29.68:0,30,242	0/1:39,2:22:28.42:28,0,117	0/0:21,1:22:26.43:0,26,449	0/0:20,0:25:59.42:0,59,546	0/0:21,0:21:29.65:0,30,483	0/0:24,2:27:16.81:0,17,562	0/0:23,0:23:15.15:0,15,504	0/0:27,1:28:14.24:0,14,550	0/0:16,1:18:23.26:0,23,416	0/0:13,1:14:14.54:0,15,351	0/0:18,0:23:53.88:0,54,525	0/0:20,0:20:45.10:0,45,473	0/0:15,0:15:37.32:0,37,378	0/0:25,1:26:38.47:0,38,591	0/0:24,0:25:65.98:0,66,667	1/1:3,21:24:27.94:436,28,0	0/0:15,0:15:36.09:0,36,382	0/0:26,0:26:66.16:0,66,697	0/0:16,0:20:44.77:0,45,437	0/0:19,2:21:4.89:0,5,462	0/0:14,0:15:30.03:0,30,300	0/0:21,0:21:51.09:0,51,531	0/0:23,0:23:60.14:0,60,634	0/0:17,1:18:14.44:0,14,353	0/0:20,0:20:47.96:0,48,483	0/0:12,0:13:35.45:0,35,365
chr10	72993261	.	T	TC	1599.74	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.884;DP=528;FS=2.821;HRun=4;HaplotypeScore=53.0265;InbreedingCoeff=0.9818;MQ=87.66;MQ0=0;MQRankSum=-1.999;QD=30.76;ReadPosRankSum=2.378;VQSLOD=3.9305;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:60.20:819,60,0	0/0:9,0:9:27.08:0,27,305	0/0:24,0:22:44.94:0,45,459	0/0:18,0:18:11.69:0,12,397	0/0:18,0:18:51.09:0,51,555	0/0:13,0:13:36.01:0,36,379	0/0:33,0:33:84.19:0,84,929	0/0:18,0:18:45.08:0,45,488	0/0:17,0:17:44.96:0,45,449	0/0:20,0:20:57.16:0,57,643	0/0:14,0:14:39.08:0,39,428	0/0:23,0:23:59.96:0,60,659	0/0:15,0:15:45.08:0,45,494	0/0:11,0:11:33.09:0,33,374	0/0:21,0:21:57.16:0,57,646	0/0:20,0:20:54.07:0,54,570	0/0:27,0:27:75.13:0,75,833	1/1:1,25:26:66.22:902,66,0	0/0:19,0:19:48.08:0,48,519	0/0:10,0:10:27.96:0,28,308	0/0:25,0:25:72.20:0,72,815	0/0:17,0:17:51.15:0,51,578	0/0:18,0:18:54.10:0,54,590	0/0:18,0:18:54.10:0,54,587	0/0:22,0:22:66.18:0,66,740	0/0:18,0:18:54.07:0,54,584	0/0:16,0:16:41.88:0,42,425	0/0:12,0:12:33.03:0,33,358
chr10	72995566	.	G	GGCGAA	5479.89	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-11.378;DP=724;FS=0.000;HRun=0;HaplotypeScore=130.4451;InbreedingCoeff=0.9905;MQ=88.81;MQ0=0;MQRankSum=-3.233;QD=72.10;ReadPosRankSum=1.832;VQSLOD=6.4566;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:33:75.26:2244,75,0	0/0:5,0:5:15.04:0,15,267	0/0:28,0:28:54.60:0,55,1002	0/0:34,0:34:61.87:0,62,1244	0/0:25,0:25:69.20:0,69,1276	0/0:21,0:21:60.19:0,60,1165	0/0:32,0:32:83.06:0,83,1544	0/0:23,0:22:45.14:0,45,810	0/0:22,0:22:63.20:0,63,1223	0/0:32,0:32:72.21:0,72,1399	0/0:20,0:20:54.19:0,54,1061	0/0:17,0:17:48.16:0,48,959	0/0:30,0:30:78.20:0,78,1417	0/0:39,0:39:99:0,108,2123	0/0:28,0:28:81.25:0,81,1548	0/0:25,0:25:60.21:0,60,1199	0/0:42,0:42:99:0,120,2324	1/1:1,41:43:99:3236,108,0	0/0:24,0:24:63.10:0,63,1182	0/0:11,0:11:30.10:0,30,600	0/0:43,0:43:99:0,117,2320	0/0:13,0:13:36.12:0,36,715	0/0:18,0:18:51.18:0,51,1019	0/0:31,0:31:87.26:0,87,1666	0/0:21,0:21:60.20:0,60,1165	0/0:27,0:27:78.25:0,78,1491	0/0:28,0:28:81.28:0,81,1609	0/0:9,0:9:24.08:0,24,480
chr10	72997088	.	CT	C	2977.83	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.716;DP=737;FS=11.246;HRun=2;HaplotypeScore=68.9466;InbreedingCoeff=0.9998;MQ=84.54;MQ0=0;MQRankSum=-2.768;QD=35.88;ReadPosRankSum=1.851;VQSLOD=3.5850;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,50:50:99:1908,147,0	0/0:18,0:18:54.17:0,54,789	0/0:25,0:25:75.22:0,75,1074	0/0:24,0:23:60.15:0,60,814	0/0:23,0:23:69.23:0,69,1034	0/0:25,0:25:75.24:0,75,1104	0/0:30,0:30:90.30:0,90,1346	0/0:40,0:40:99:0,120,1747	0/0:24,0:24:72.23:0,72,1058	0/0:24,0:24:69.23:0,69,1018	0/0:12,0:12:36.12:0,36,538	0/0:25,0:25:75.25:0,75,1123	0/0:22,0:22:63.21:0,63,944	0/0:27,0:27:78.25:0,78,1147	0/0:42,0:42:99:0,123,1820	0/0:28,0:28:84.28:0,84,1259	0/0:35,0:35:99:0,102,1529	1/1:3,30:33:93.28:1191,93,0	0/0:25,0:25:75.25:0,75,1120	0/0:29,0:29:87.29:0,87,1304	0/0:35,0:35:99:0,105,1506	0/0:13,0:13:36.11:0,36,519	0/0:15,0:15:45.15:0,45,672	0/0:28,0:28:81.27:0,81,1210	0/0:20,0:20:57.19:0,57,853	0/0:32,0:32:96.30:0,96,1400	0/0:20,0:20:60.19:0,60,878	0/0:13,0:13:39.13:0,39,585
chr10	72998583	.	GGA	G	199.15	PASS	AB=0.952;AC=11;AF=0.212;AN=52;BaseQRankSum=1.411;DP=544;FS=21.108;HRun=0;HaplotypeScore=74.6692;InbreedingCoeff=0.2908;MQ=52.40;MQ0=32;MQRankSum=-2.333;QD=1.31;ReadPosRankSum=-1.523;VQSLOD=0.0020;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:21:12.67:0,13,82	0/1:5,0:5:0:0,0,0	./.	./.	0/1:17,0:17:0.13:0,0,0	0/0:13,0:13:3.47:0,3,26	0/0:23,0:22:2.99:0,3,24	0/0:28,0:26:2.97:0,3,20	0/0:18,0:18:20.97:0,21,210	1/1:22,0:21:5.84:45,6,0	0/0:9,0:9:0:0,0,0	0/0:14,0:14:8.99:0,9,77	0/0:16,0:16:18.24:0,18,137	0/0:13,0:13:8.99:0,9,97	0/0:17,0:17:8.81:0,9,107	0/1:18,1:19:22.73:23,0,75	0/0:17,0:23:31.09:0,31,313	1/1:13,0:12:9.94:63,10,0	1/1:23,0:22:3:30,3,0	0/0:15,0:14:6.01:0,6,69	0/0:17,0:15:12.01:0,12,143	0/0:11,0:11:3.19:0,3,25	0/0:11,0:11:3:0,3,25	0/0:14,0:15:8.80:0,9,66	0/0:13,2:15:11.74:0,12,113	0/1:23,5:28:99:146,0,130	0/1:23,0:22:19.77:20,0,93	0/0:14,0:12:9.46:0,9,78
chr10	72998926	.	C	CT	628.21	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-2.592;DP=617;FS=4.455;HRun=10;HaplotypeScore=72.8954;InbreedingCoeff=0.7333;MQ=74.48;MQ0=3;MQRankSum=-2.648;QD=11.42;ReadPosRankSum=-0.368;VQSLOD=3.1423;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:20:41.81:413,42,0	0/0:6,0:6:14.97:0,15,123	0/0:41,0:32:49.50:0,49,367	0/1:21,0:18:12.02:12,0,117	0/0:25,0:24:59.88:0,60,492	0/0:23,0:24:52.95:0,53,424	0/0:18,0:19:49.97:0,50,399	0/0:43,2:44:40.78:0,41,733	0/0:16,0:16:44.87:0,45,362	0/0:26,0:26:59.88:0,60,490	0/0:21,0:23:55:0,55,430	0/0:17,0:17:35.33:0,35,294	0/0:16,0:16:38.94:0,39,320	0/0:15,0:15:41.95:0,42,344	0/0:19,0:19:50.85:0,51,411	0/0:23,0:24:67.94:0,68,548	0/0:28,1:29:52.17:0,52,547	1/1:1,12:13:11.45:327,11,0	0/0:23,0:24:61.92:0,62,492	0/0:17,1:18:10.27:0,10,289	0/0:15,0:16:9.07:0,9,270	0/0:15,0:15:41.94:0,42,343	0/0:24,0:24:62.17:0,62,509	0/0:15,0:16:44.17:0,44,352	0/0:27,0:27:68.90:0,69,566	0/0:15,0:16:28.49:0,28,227	0/0:28,0:28:75.51:0,76,598	0/0:29,0:31:79.92:0,80,646
chr10	72999000	.	CCCTT	C	887.38	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.564;DP=681;FS=1.720;HRun=0;HaplotypeScore=111.9002;InbreedingCoeff=0.9760;MQ=60.71;MQ0=2;MQRankSum=-4.087;QD=25.35;ReadPosRankSum=-1.198;VQSLOD=3.2201;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,13:29:48.12:794,48,0	0/0:13,0:13:39.13:0,39,922	0/0:33,0:20:12.23:0,12,636	0/0:36,0:24:48.63:0,49,1055	0/0:40,0:40:99:0,108,2497	0/0:29,0:29:72.23:0,72,1695	0/0:20,0:20:51.13:0,51,1158	0/0:25,0:25:57.20:0,57,1414	0/0:21,0:21:57.20:0,57,1414	0/0:31,0:31:90.28:0,90,2153	0/0:29,0:29:78.25:0,78,1831	0/0:15,0:15:39.13:0,39,938	0/0:22,0:22:57.20:0,57,1394	0/0:18,0:18:45.15:0,45,1073	0/0:25,0:25:63.20:0,63,1494	0/0:21,0:21:60.21:0,60,1506	0/0:38,0:38:96.32:0,96,2147	1/1:4,2:6:15.01:212,15,0	0/0:30,0:30:64.95:0,65,1312	0/0:31,0:31:90.31:0,90,2197	0/0:14,0:14:36.12:0,36,860	0/0:23,0:23:60.20:0,60,1442	0/0:23,0:23:57.17:0,57,1335	0/0:18,0:18:48.16:0,48,1181	0/0:19,0:19:51.18:0,51,1203	0/0:15,0:15:45.15:0,45,1076	0/0:41,0:39:99:0,111,2616	0/0:16,0:16:27.09:0,27,645
chr10	72999175	.	C	CT	3565	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=13.030;DP=507;FS=1.767;HRun=3;HaplotypeScore=94.7913;InbreedingCoeff=0.9810;MQ=78.89;MQ0=0;MQRankSum=0.674;QD=16.50;ReadPosRankSum=4.400;VQSLOD=3.5817;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:17.26:68,17,0	0/0:10,0:10:17.99:0,18,194	0/0:20,0:18:35.34:0,35,317	0/0:15,0:14:16.42:0,16,183	0/0:17,0:17:29.37:0,29,330	0/0:20,0:20:54.07:0,54,600	0/0:14,0:14:42.05:0,42,445	0/0:23,0:23:47.99:0,48,428	0/0:21,0:21:51.07:0,51,548	1/1:26,0:26:44.65:218,45,0	1/1:15,0:15:15.35:42,15,0	1/1:5,10:15:40.34:479,40,0	1/1:10,18:29:82.42:939,82,0	0/0:14,0:14:36.08:0,36,406	0/0:15,0:15:36.05:0,36,384	0/0:18,0:18:45.01:0,45,473	1/1:19,0:19:12.96:87,13,0	1/1:10,0:11:9.57:44,10,0	0/0:18,0:18:44.98:0,45,415	0/0:23,0:23:38.89:0,39,386	0/0:16,0:16:38.97:0,39,378	1/1:1,13:14:36.06:450,36,0	1/1:0,11:12:30.09:383,30,0	1/1:0,26:27:60.19:772,60,0	1/1:17,0:17:18.13:83,18,0	0/0:10,0:10:29.86:0,30,288	0/0:25,0:25:57.01:0,57,560	0/0:11,0:11:33.02:0,33,334
chr10	72999178	.	TC	T	521.99	PASS	AB=0.922;AC=14;AF=0.250;AN=56;BaseQRankSum=4.645;DP=496;FS=13.049;HRun=11;HaplotypeScore=95.8351;InbreedingCoeff=0.5771;MQ=78.52;MQ0=0;MQRankSum=-0.041;QD=3.00;ReadPosRankSum=0.919;VQSLOD=-0.3301;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:44.07:0,44,224	0/0:10,0:10:24.05:0,24,249	0/0:18,0:17:0.74:0,1,161	0/1:15,0:14:3.74:4,0,76	0/0:15,1:16:14:0,14,327	0/0:20,0:20:51.09:0,51,526	0/0:14,0:14:8.43:0,8,266	0/1:19,1:20:13.41:13,0,26	0/0:19,0:20:30.28:0,30,403	0/0:25,1:26:21.87:0,22,189	0/0:15,0:15:17.97:0,18,131	1/1:17,0:17:24.71:136,25,0	1/1:28,0:28:20.05:128,20,0	0/0:13,0:13:36.06:0,36,363	0/0:14,0:14:29.93:0,30,283	0/0:17,0:17:15.14:0,15,352	0/0:18,0:18:32.46:0,32,186	0/0:11,0:11:5.07:0,5,57	0/1:13,4:17:93.33:93,0,101	0/0:22,0:22:11.22:0,11,261	0/0:17,0:17:30.88:0,31,287	1/1:13,0:13:27.09:102,27,0	1/1:12,0:12:16.82:65,17,0	1/1:26,0:26:38.73:152,39,0	0/0:17,0:17:41.23:0,41,184	0/0:10,1:11:18.03:0,18,183	0/1:23,2:25:7.19:7,0,327	0/0:11,0:11:27.02:0,27,263
chr10	73000178	.	A	AT	334.34	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.052;DP=612;FS=0.000;HRun=10;HaplotypeScore=66.8189;InbreedingCoeff=0.9094;MQ=78.42;MQ0=0;MQRankSum=-2.996;QD=20.90;ReadPosRankSum=-1.539;VQSLOD=3.9135;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:57:99:0,147,1207	0/0:11,0:11:32.94:0,33,268	0/0:16,0:16:26.79:0,27,272	0/0:18,0:19:39.32:0,39,290	0/0:23,0:23:59.91:0,60,489	0/0:17,0:17:38.93:0,39,320	0/0:25,0:25:53:0,53,435	0/0:25,0:25:68.46:0,68,564	0/0:17,0:17:38.95:0,39,320	0/0:19,0:20:40.96:0,41,326	0/0:20,0:19:38.90:0,39,320	0/0:17,0:17:32.93:0,33,271	0/0:13,0:13:35.96:0,36,296	0/0:26,0:26:68.86:0,69,561	0/0:26,0:26:71.88:0,72,588	0/0:32,0:32:89.89:0,90,739	0/0:28,0:28:65.91:0,66,542	1/1:3,13:16:43.29:429,43,0	0/0:19,0:19:44.90:0,45,363	0/0:21,0:21:50.91:0,51,416	0/0:24,0:25:38.37:0,38,429	0/0:12,0:12:20.92:0,21,172	0/0:16,1:17:6.95:0,7,264	0/0:30,0:30:80.83:0,81,655	0/0:14,0:14:29.94:0,30,246	0/0:25,0:25:28.10:0,28,429	0/0:28,0:29:76.93:0,77,619	0/0:11,0:11:20.94:0,21,169
chr10	73000640	.	CA	C	6475.13	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.809;DP=662;FS=4.058;HRun=9;HaplotypeScore=66.8203;InbreedingCoeff=0.9687;MQ=71.65;MQ0=0;MQRankSum=-1.397;QD=23.13;ReadPosRankSum=3.060;VQSLOD=5.9067;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:75.04:686,75,0	0/0:9,1:10:2.62:0,3,284	0/0:13,1:14:14.68:0,15,156	0/0:19,0:18:16:0,16,264	0/0:24,0:24:66.18:0,66,745	0/0:24,0:24:72.21:0,72,831	0/0:22,0:22:61.42:0,61,695	0/0:28,0:28:66.19:0,66,753	0/0:25,1:26:35.71:0,36,657	1/1:6,34:40:99:957,105,0	1/1:1,16:17:45.02:412,45,0	1/1:1,21:23:59.06:528,59,0	1/1:3,18:21:54.91:496,55,0	0/0:21,0:21:60.17:0,60,686	0/0:32,0:33:90.10:0,90,1016	0/0:23,0:23:60.18:0,60,692	1/1:1,37:38:99:933,102,0	1/1:0,18:18:54.03:492,54,0	0/0:18,0:20:44.80:0,45,479	0/0:22,0:22:51.14:0,51,579	0/0:27,0:27:72.16:0,72,797	1/1:8,18:26:22.40:460,22,0	1/1:4,18:22:51.02:467,51,0	1/1:4,23:27:60.03:549,60,0	1/1:3,19:22:54.03:494,54,0	0/0:21,1:22:35.70:0,36,649	0/0:39,0:39:99:0,111,1252	0/0:8,0:8:24.07:0,24,277
chr10	73000819	.	AT	A	957.27	PASS	AB=0.921;AC=6;AF=0.107;AN=56;BaseQRankSum=7.137;DP=636;FS=2.647;HRun=9;HaplotypeScore=68.2241;InbreedingCoeff=0.6390;MQ=83.66;MQ0=0;MQRankSum=-2.643;QD=11.00;ReadPosRankSum=1.435;VQSLOD=2.8721;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,19:26:51:467,51,0	0/0:14,0:14:39.12:0,39,450	0/1:17,1:18:35.32:35,0,237	0/0:26,0:25:40.02:0,40,405	0/0:21,1:25:38.44:0,38,624	0/0:22,0:22:63.15:0,63,712	0/0:28,0:30:75:0,75,821	0/0:26,0:26:57.16:0,57,650	0/0:27,1:29:56.54:0,57,824	0/0:21,1:22:29.78:0,30,588	0/0:18,0:18:39.05:0,39,415	0/0:25,0:25:66.19:0,66,753	0/0:29,0:29:84.24:0,84,960	0/0:23,0:23:60.16:0,60,673	0/0:24,0:24:72.20:0,72,823	0/0:31,0:31:87.23:0,87,984	0/0:23,0:23:54.16:0,54,623	1/1:3,23:26:37.38:580,37,0	0/0:18,0:18:39.09:0,39,431	0/1:15,2:17:9.82:10,0,387	0/0:22,0:22:57.16:0,57,648	0/0:17,0:17:36.10:0,36,407	0/0:18,0:18:45.11:0,45,497	0/0:27,0:27:75.21:0,75,854	0/0:22,0:22:57.15:0,57,646	0/0:16,0:16:45.13:0,45,519	0/0:23,0:23:63.16:0,63,708	0/0:19,0:19:57.17:0,57,658
chr10	73001472	.	AATT	A	1636.43	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.174;DP=300;FS=14.970;HRun=0;HaplotypeScore=41.2294;InbreedingCoeff=0.7382;MQ=66.98;MQ0=0;MQRankSum=-0.220;QD=22.42;ReadPosRankSum=3.970;VQSLOD=1.7061;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:39.13:0,39,793	0/0:4,0:4:9.03:0,9,185	0/0:8,0:6:9.02:0,9,125	0/0:4,0:2:3.01:0,3,34	0/0:11,0:11:24.08:0,24,472	0/0:21,0:21:54.19:0,54,1096	0/0:2,0:2:3.01:0,3,62	0/0:36,0:36:70.47:0,70,1332	0/0:5,0:5:9.03:0,9,185	1/1:6,7:13:21.07:303,21,0	1/1:5,9:14:18.06:263,18,0	0/0:3,0:3:3.01:0,3,61	0/0:6,0:6:15.05:0,15,308	0/0:4,0:4:12.04:0,12,246	0/0:7,0:7:15.05:0,15,308	0/0:3,0:3:6.02:0,6,117	1/1:3,24:27:54.18:788,54,0	0/0:22,0:22:63.22:0,63,1261	0/0:12,0:12:27.09:0,27,554	0/0:8,0:8:21.07:0,21,421	0/0:5,0:5:15.05:0,15,296	0/0:2,0:2:6.02:0,6,123	0/0:8,0:8:15.05:0,15,305	0/0:2,0:2:6.02:0,6,111	1/1:6,13:19:30.10:438,30,0	0/0:12,0:12:24.08:0,24,484	0/0:7,0:7:18.06:0,18,358	0/0:14,0:14:30.10:0,30,604
chr10	73001583	.	GGTGTGTGTGT	G	335.13	PASS	AB=0.893;AC=6;AF=0.125;AN=48;BaseQRankSum=3.721;DP=473;FS=6.362;HRun=0;HaplotypeScore=131.3000;InbreedingCoeff=0.0525;MQ=64.91;MQ0=27;MQRankSum=-3.423;QD=3.19;ReadPosRankSum=-0.215;VQSLOD=2.2117;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:10,0:8:3.01:0,3,145	./.	./.	0/0:12,0:12:9:0,9,312	0/0:20,0:20:15.04:0,15,449	0/0:23,0:20:15.39:0,15,228	0/0:30,0:29:12.54:0,13,71	0/0:15,0:14:5.93:0,6,74	0/0:15,0:14:2.96:0,3,19	0/0:12,0:12:0:0,0,0	0/1:9,3:11:67.10:67,0,67	./.	0/0:8,0:7:6:0,6,135	0/0:8,0:8:3.01:0,3,148	0/0:11,0:11:17.90:0,18,230	0/1:32,0:30:99:124,0,111	0/1:24,0:23:99:130,0,113	0/0:25,0:24:15.05:0,15,519	0/0:10,0:10:3.01:0,3,148	0/0:32,0:26:8.99:0,9,251	1/1:10,0:10:3.01:42,3,0	0/0:11,0:11:3:0,3,25	0/1:19,8:25:3.63:82,0,4	0/0:17,0:14:2.99:0,3,24	0/0:14,0:12:14.98:0,15,323	0/0:6,0:5:9.03:0,9,339	0/0:6,0:5:3.01:0,3,146
chr10	73001632	.	GTGTGTGTA	G	1311.47	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=8.450;DP=446;FS=10.394;HRun=0;HaplotypeScore=98.9027;InbreedingCoeff=0.5033;MQ=49.01;MQ0=46;MQRankSum=-1.835;QD=6.52;ReadPosRankSum=-0.021;VQSLOD=1.2806;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:38.84:303,39,0	0/0:6,0:6:17.95:0,18,291	0/1:30,0:2:0.88:1,0,13	0/0:30,0:8:7.65:0,8,145	0/0:8,0:8:21.01:0,21,400	0/0:20,0:20:32.89:0,33,443	0/0:32,0:27:63.20:0,63,746	0/0:9,0:8:20.66:0,21,177	0/0:14,0:11:20.94:0,21,166	1/1:11,0:10:23.43:193,23,0	1/1:2,9:11:2.71:17,3,0	0/1:16,0:16:15.99:16,0,88	0/0:4,0:3:3:0,3,25	0/0:3,0:3:6.01:0,6,86	0/0:19,0:19:35.48:0,35,470	0/0:14,0:13:17.98:0,18,193	1/1:13,23:32:14.98:325,15,0	0/1:25,0:23:17.68:436,0,18	0/0:16,0:16:42:0,42,542	0/0:5,0:5:9:0,9,159	0/0:25,0:19:32.53:0,33,479	0/1:11,0:11:1.97:2,0,107	0/0:9,0:8:14.97:0,15,122	0/1:27,0:25:11.32:11,0,169	1/1:17,0:13:20.98:177,21,0	0/0:15,0:12:25.37:0,25,320	0/0:8,0:5:12.50:0,12,317	0/0:8,0:7:17.99:0,18,265
chr10	73001638	.	GTA	G	1326.86	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=8.182;DP=441;FS=1.028;HRun=0;HaplotypeScore=68.1779;InbreedingCoeff=0.3037;MQ=55.00;MQ0=32;MQRankSum=-2.609;QD=5.46;ReadPosRankSum=-0.841;VQSLOD=2.6548;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:47.79:372,48,0	0/0:7,0:7:19.17:0,19,145	0/1:34,0:5:10.90:11,0,48	0/1:32,0:10:11.31:11,0,134	0/0:8,0:8:23.99:0,24,245	0/1:20,0:20:20.24:20,0,239	0/0:32,1:30:71.63:0,72,591	0/0:15,0:14:41.98:0,42,368	0/0:12,0:11:0.24:0,0,142	1/1:0,11:11:29.93:242,30,0	1/1:9,0:9:2.92:17,3,0	0/0:13,0:13:22.48:0,22,163	0/0:2,0:2:3:0,3,25	0/1:2,0:2:18.98:28,0,19	0/0:21,0:21:38.80:0,39,371	0/1:8,0:8:3.99:4,0,105	1/1:27,0:26:14.87:106,15,0	1/1:25,0:23:58.28:427,58,0	0/1:19,0:19:48.94:49,0,232	0/0:5,0:5:9:0,9,78	0/0:25,0:20:41.77:0,42,368	0/0:12,0:12:4.04:0,4,155	0/0:8,0:7:17.97:0,18,148	0/0:27,0:25:29.77:0,30,224	1/1:13,0:11:20.98:177,21,0	0/1:16,0:13:38.93:39,0,132	0/1:7,0:6:6.70:7,0,77	0/0:10,0:9:23.86:0,24,214
chr10	73003346	.	A	AT	1387.56	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.462;DP=478;FS=0.000;HRun=6;HaplotypeScore=64.2105;InbreedingCoeff=0.9951;MQ=79.94;MQ0=0;MQRankSum=-2.546;QD=33.04;ReadPosRankSum=0.753;VQSLOD=3.6658;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:48.10:0,48,489	0/0:9,0:9:27.06:0,27,275	0/0:18,0:18:41.08:0,41,389	0/0:23,0:21:40.20:0,40,419	0/0:29,0:29:75.15:0,75,759	1/1:0,18:18:54.17:679,54,0	1/1:1,23:24:66.21:830,66,0	0/0:30,0:29:81.18:0,81,826	0/0:12,0:12:36.08:0,36,367	0/0:15,0:15:44.89:0,45,449	0/0:20,0:20:60.12:0,60,606	0/0:10,0:10:30.07:0,30,306	0/0:11,0:11:27.06:0,27,275	0/0:14,0:14:36.06:0,36,357	0/0:18,0:18:54.12:0,54,551	0/0:15,0:15:45.07:0,45,445	0/0:22,0:22:57.10:0,57,581	0/0:20,0:20:40.31:0,40,500	0/0:15,0:15:36.08:0,36,367	0/0:21,0:21:63.11:0,63,628	0/0:10,0:10:27.06:0,27,275	0/0:11,0:11:27.06:0,27,275	0/0:14,0:14:33.07:0,33,337	0/0:9,0:9:24.05:0,24,245	0/0:13,0:13:39.07:0,39,390	0/0:9,0:9:24.05:0,24,244	0/0:31,0:31:81.17:0,81,823	0/0:16,0:16:42.06:0,42,418
chr10	73003371	.	CAGAGAGAG	C	1001.98	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.006;DP=532;FS=14.201;HRun=0;HaplotypeScore=135.4867;InbreedingCoeff=0.8396;MQ=69.89;MQ0=5;MQRankSum=-5.653;QD=15.42;ReadPosRankSum=2.036;VQSLOD=2.2347;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:27.09:0,27,1039	0/0:12,0:12:12.04:0,12,454	0/0:26,0:16:3.48:0,3,42	0/0:50,0:25:11.75:0,12,150	0/0:24,0:25:33.10:0,33,1046	0/0:12,0:14:30.08:0,30,827	0/0:21,0:24:24.08:0,24,744	0/0:28,0:27:35.32:0,35,901	0/0:9,0:9:24.08:0,24,841	0/0:17,0:24:48.22:0,48,1563	0/0:15,0:21:21.07:0,21,655	1/1:5,3:9:12.04:282,12,0	1/1:7,6:15:15.05:338,15,0	0/0:9,0:11:18.06:0,18,585	0/0:20,0:21:45.14:0,45,1502	0/0:11,0:12:15.04:0,15,423	0/0:22,0:27:57.15:0,57,1673	0/0:21,0:22:36.12:0,36,1172	0/0:11,0:11:15.05:0,15,502	0/0:24,0:25:24.08:0,24,859	0/0:10,0:12:21.07:0,21,665	1/1:9,4:14:9.03:179,9,0	1/1:11,4:16:12.04:282,12,0	1/1:9,2:11:3.01:76,3,0	0/0:19,0:21:42.14:0,42,1424	0/0:11,0:14:27.09:0,27,809	0/0:24,0:25:39.60:0,40,1418	0/0:11,0:11:6.02:0,6,247
chr10	73003593	.	TG	T	4143.68	PASS	AB=0.857;AC=19;AF=0.339;AN=56;BaseQRankSum=7.130;DP=581;FS=15.237;HRun=9;HaplotypeScore=67.2999;InbreedingCoeff=0.8807;MQ=83.75;MQ0=0;MQRankSum=-1.187;QD=21.14;ReadPosRankSum=4.200;VQSLOD=3.0226;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:43.94:0,44,208	0/0:7,0:7:21.05:0,21,232	0/0:18,0:18:35.04:0,35,356	0/0:16,0:16:29.97:0,30,323	0/0:31,0:31:78.18:0,78,857	0/0:19,0:19:39.09:0,39,431	0/0:26,0:26:63.17:0,63,716	0/0:16,1:17:2.54:0,3,262	0/0:22,1:23:32.70:0,33,621	1/1:3,18:21:50.98:456,51,0	1/1:5,10:15:23.02:241,23,0	1/1:2,29:31:78.03:714,78,0	1/1:4,22:26:60.03:549,60,0	0/0:23,0:23:66.17:0,66,747	0/0:28,0:28:81.22:0,81,915	0/0:21,2:23:5.22:0,5,548	1/1:2,28:31:83.08:747,83,0	0/0:11,0:11:24.56:0,25,108	0/0:23,0:23:53.81:0,54,583	0/0:19,0:19:45.13:0,45,519	0/0:22,0:24:35.93:0,36,387	1/1:4,15:19:42.02:384,42,0	1/1:4,13:17:36.01:329,36,0	1/1:1,19:20:57.02:522,57,0	1/1:2,8:10:21.01:192,21,0	0/0:25,0:25:63.11:0,63,718	0/0:23,0:23:45.12:0,45,508	0/1:4,1:6:9.57:10,0,135
chr10	73003598	.	G	GGT	1067.22	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.052;DP=572;FS=19.586;HRun=0;HaplotypeScore=88.9109;InbreedingCoeff=0.9943;MQ=84.08;MQ0=0;MQRankSum=-3.472;QD=23.20;ReadPosRankSum=0.876;VQSLOD=2.7079;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:35:42.37:718,42,0	0/0:7,0:7:21.06:0,21,292	0/0:18,0:18:42.55:0,43,525	0/0:16,0:16:45.03:0,45,568	0/0:31,0:31:84.24:0,84,1186	0/0:18,0:18:48.11:0,48,637	0/0:25,0:25:72.17:0,72,991	0/0:19,0:19:41.67:0,42,474	0/0:21,0:21:63.13:0,63,875	0/0:21,0:21:62.75:0,63,495	0/0:13,0:13:35.85:0,36,292	0/0:32,0:32:86.52:0,87,650	0/0:25,0:25:62.66:0,63,469	0/0:22,0:22:66.22:0,66,981	0/0:27,0:27:81.27:0,81,1187	0/0:24,0:24:69.14:0,69,911	0/0:32,0:32:89.51:0,90,673	1/1:0,11:11:27.09:471,27,0	0/0:21,0:21:54.17:0,54,769	0/0:17,0:17:51.12:0,51,714	0/0:19,0:19:43.80:0,44,537	0/0:20,0:20:53.75:0,54,411	0/0:16,0:16:41.79:0,42,318	0/0:20,0:20:59.68:0,60,448	0/0:11,0:11:26.88:0,27,209	0/0:25,0:25:66.17:0,66,944	0/0:19,0:19:45.14:0,45,648	0/0:7,0:7:20.51:0,21,234
chr10	73004059	.	ACGCG	A	326.33	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=4.587;DP=522;FS=6.208;HRun=0;HaplotypeScore=101.5594;InbreedingCoeff=0.6063;MQ=63.22;MQ0=9;MQRankSum=-3.524;QD=6.28;ReadPosRankSum=-1.748;VQSLOD=1.4962;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:3.01:60,3,0	0/0:9,0:8:3.62:0,4,369	0/1:14,0:8:4.47:4,0,51	0/0:9,0:3:2.97:0,3,20	0/0:26,0:23:60.26:0,60,1338	0/0:30,0:30:81.23:0,81,1827	0/0:26,0:26:50.26:0,50,1517	0/0:19,0:18:48.53:0,49,725	0/0:21,0:21:51.09:0,51,1005	0/0:18,0:18:44.17:0,44,895	0/0:17,0:17:32.63:0,33,406	0/0:13,0:13:38.32:0,38,684	0/0:21,0:21:56.98:0,57,1239	0/0:14,0:14:42.14:0,42,945	0/0:14,0:14:17.17:0,17,859	0/0:10,0:9:27.08:0,27,616	0/0:17,0:17:30.03:0,30,442	1/1:11,1:12:30.30:374,30,0	0/0:14,0:14:42.05:0,42,787	0/0:26,0:26:73.09:0,73,1535	0/0:29,0:29:78.26:0,78,1552	0/0:15,0:15:16.78:0,17,757	0/0:20,0:20:54.18:0,54,1227	0/0:28,0:28:81.28:0,81,1839	0/0:24,0:24:51.04:0,51,841	0/0:16,0:16:48.12:0,48,951	0/0:22,0:23:67.28:0,67,1471	0/0:11,0:11:9.19:0,9,642
chr10	73004063	.	G	GCACACA	2078	PASS	AB=1.000;AC=10;AF=0.185;AN=54;BaseQRankSum=-1.544;DP=557;FS=16.487;HRun=0;HaplotypeScore=131.9420;InbreedingCoeff=0.6240;MQ=60.86;MQ0=10;MQRankSum=-3.659;QD=16.23;ReadPosRankSum=-3.077;VQSLOD=1.5308;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:5.90:0,6,42	0/0:8,0:8:18.84:0,19,264	./.	0/0:11,0:3:3.01:0,3,39	0/0:22,0:23:49.05:0,49,880	0/0:29,0:32:57.19:0,57,1089	0/0:22,0:24:41.66:0,42,838	0/1:21,0:20:21.93:22,0,170	0/0:18,0:23:21.05:0,21,354	1/1:6,15:25:47.89:1177,48,0	1/1:5,11:25:4.99:191,5,0	0/0:10,0:12:21.07:0,21,388	0/0:21,0:21:38.80:0,39,757	0/0:16,0:16:23.82:0,24,490	0/0:13,0:13:8.15:0,8,549	0/0:11,0:10:23.08:0,23,342	1/1:9,8:20:9.03:272,9,0	0/0:12,0:12:9.45:0,9,87	0/0:12,0:13:21.07:0,21,365	0/0:24,0:28:57.19:0,57,1046	0/0:30,0:32:36.08:0,36,612	0/0:11,0:15:24.08:0,24,452	0/0:18,0:18:41.63:0,42,770	0/0:27,0:29:57.15:0,57,1031	1/1:7,14:26:24.08:542,24,0	0/0:18,0:19:37.11:0,37,484	0/0:22,0:22:57.14:0,57,946	0/1:11,0:11:29.89:30,0,142
chr10	73004836	.	TAGAGCTGGTTCC	T	3061.93	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.986;DP=781;FS=0.709;HRun=0;HaplotypeScore=258.2889;InbreedingCoeff=0.9978;MQ=58.97;MQ0=0;MQRankSum=-8.957;QD=54.68;ReadPosRankSum=1.620;VQSLOD=2.8963;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,25:39:51.18:1815,51,0	0/0:17,0:17:48.16:0,48,2726	0/0:23,0:21:63.19:0,63,3488	0/0:36,0:35:99:0,102,5663	0/0:23,0:23:66.23:0,66,3946	0/0:20,0:20:60.21:0,60,3412	0/0:37,0:37:99:0,108,6207	0/0:40,0:40:99:0,114,6232	0/0:24,0:24:66.23:0,66,3863	0/0:51,0:51:99:0,148,8368	0/0:14,0:14:42.14:0,42,2564	0/0:27,0:27:75.26:0,75,4534	0/0:23,0:23:69.24:0,69,3963	0/0:30,0:30:84.28:0,84,4938	0/0:31,0:31:90.31:0,90,5282	0/0:27,0:27:75.24:0,75,4209	0/0:34,0:34:99:0,102,6174	1/1:4,13:17:36.12:1368,36,0	0/0:19,0:18:48.16:0,48,2645	0/0:37,0:37:99:0,108,6383	0/0:42,0:42:99:0,117,6766	0/0:26,0:26:75.26:0,75,4310	0/0:29,0:29:78.27:0,78,4672	0/0:35,0:35:99:0,102,5955	0/0:35,0:35:99:0,105,6349	0/0:18,0:18:54.19:0,54,3211	0/0:20,0:20:57.20:0,57,3534	0/0:7,0:7:21.07:0,21,1249
chr10	73005295	.	AG	A	117.99	PASS	AB=0.875;AC=3;AF=0.054;AN=56;BaseQRankSum=8.091;DP=667;FS=2.524;HRun=1;HaplotypeScore=109.8056;InbreedingCoeff=0.6491;MQ=47.71;MQ0=28;MQRankSum=-6.801;QD=6.21;ReadPosRankSum=-1.982;VQSLOD=-0.1486;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,5:9:20.89:165,21,0	0/0:16,0:15:24.63:0,25,298	0/0:23,0:1:3.01:0,3,37	0/0:32,0:2:6.02:0,6,75	0/0:27,0:27:50.34:0,50,683	0/0:22,0:22:63.16:0,63,825	0/0:26,0:24:57.19:0,57,788	0/0:25,0:24:69.03:0,69,816	0/0:25,0:25:41.16:0,41,520	0/0:36,0:35:99:0,103,1369	0/0:18,0:17:38.96:0,39,522	0/0:18,0:17:30.06:0,30,348	0/0:25,0:25:54.43:0,54,707	0/0:26,0:26:45.01:0,45,579	0/0:35,0:33:80.08:0,80,1021	0/0:18,0:18:16.50:0,16,404	0/0:24,0:20:46.86:0,47,569	0/1:6,1:6:3.53:57,0,4	0/0:19,0:19:57.11:0,57,734	0/0:31,0:31:36.41:0,36,480	0/0:30,0:29:46.55:0,47,625	0/0:30,0:30:43.58:0,44,576	0/0:24,0:24:44.96:0,45,587	0/0:29,0:27:42.13:0,42,519	0/0:30,0:30:40.84:0,41,566	0/0:22,0:22:66.20:0,66,813	0/0:24,0:22:51.15:0,51,689	0/0:13,0:13:36.39:0,36,459
chr10	73005429	.	C	CATCAT	1915.52	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.983;DP=669;FS=19.531;HRun=0;HaplotypeScore=131.3015;InbreedingCoeff=0.9957;MQ=87.61;MQ0=0;MQRankSum=-6.716;QD=44.55;ReadPosRankSum=0.196;VQSLOD=2.5422;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,22:34:48.16:1518,48,0	0/0:12,0:12:36.10:0,36,747	0/0:26,0:26:62.39:0,62,1399	0/0:26,0:26:56.47:0,56,1423	0/0:30,0:30:90.25:0,90,1847	0/0:26,0:26:78.21:0,78,1637	0/0:24,0:24:72.19:0,72,1562	0/0:37,0:37:99:0,105,2296	0/0:28,0:28:81.28:0,81,1855	0/0:24,0:24:72.24:0,72,1635	0/0:14,0:14:42.14:0,42,977	0/0:24,0:24:72.23:0,72,1610	0/0:26,0:26:78.26:0,78,1712	0/0:26,0:26:72.22:0,72,1580	0/0:29,0:29:84.26:0,84,1828	0/0:19,0:19:57.20:0,57,1310	0/0:23,0:22:60.18:0,60,1307	1/1:7,2:9:18.06:517,18,0	0/0:17,0:17:51.16:0,51,1142	0/0:22,0:22:66.21:0,66,1451	0/0:35,0:35:99:0,105,2396	0/0:17,0:17:51.18:0,51,1186	0/0:12,0:12:36.05:0,36,691	0/0:25,0:25:75.19:0,75,1600	0/0:25,0:25:75.26:0,75,1692	0/0:29,0:29:84.27:0,84,1869	0/0:34,0:34:99:0,99,2208	0/0:16,0:16:48.16:0,48,1118
chr10	73005847	.	C	CTG	476.61	PASS	AB=0.899;AC=25;AF=0.543;AN=46;BaseQRankSum=-1.196;DP=519;FS=0.000;HRun=0;HaplotypeScore=121.2360;InbreedingCoeff=0.0413;MQ=67.61;MQ0=9;MQRankSum=0.754;QD=1.62;ReadPosRankSum=-1.136;VQSLOD=2.0982;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:29:0.47:1,0,0	0/1:9,2:11:25.56:38,0,26	./.	./.	0/0:17,0:17:2.51:0,3,15	./.	0/0:24,0:24:2.54:0,3,31	1/1:14,0:13:2.60:10,3,0	./.	1/1:7,5:12:8.34:56,8,0	1/1:16,0:16:5.60:57,6,0	0/0:8,0:11:2.84:0,3,14	0/0:9,0:13:2.84:0,3,14	1/1:9,0:9:5.05:50,5,0	1/1:20,0:19:5.97:45,6,0	0/1:10,2:13:26.08:37,0,26	0/0:22,0:21:0.33:0,0,1	1/1:20,0:19:9.03:108,9,0	0/1:17,0:17:9:9,0,17	0/1:18,0:18:43.34:45,0,43	0/1:42,0:42:13.52:14,0,39	0/0:10,0:13:2.84:0,3,14	./.	0/0:38,0:40:5.46:0,5,28	1/1:17,0:17:5.90:38,6,0	1/1:20,0:19:6.19:34,6,0	0/1:14,2:16:7.63:38,0,8	0/1:13,5:18:31.85:32,0,52
chr10	73006642	.	C	CT	1553.24	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.732;DP=470;FS=6.629;HRun=4;HaplotypeScore=75.8257;InbreedingCoeff=0.9633;MQ=80.04;MQ0=6;MQRankSum=-1.504;QD=31.06;ReadPosRankSum=4.152;VQSLOD=4.1701;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:34:90.30:1217,90,0	0/0:7,0:7:21:0,21,212	0/0:46,1:31:15.19:0,15,231	0/0:55,0:30:23.68:0,24,292	0/0:18,0:18:42.01:0,42,457	0/0:9,0:9:23.81:0,24,228	0/0:12,0:12:33.06:0,33,353	0/0:17,0:16:33.08:0,33,360	0/0:13,0:13:36.08:0,36,392	0/0:15,0:15:33.05:0,33,359	0/0:16,0:16:36.03:0,36,384	0/0:23,0:23:62.99:0,63,650	0/0:16,0:16:48.11:0,48,531	0/0:17,0:17:51.08:0,51,560	0/0:22,0:21:39.03:0,39,529	0/0:12,0:12:30.06:0,30,322	0/0:18,0:18:42.23:0,42,458	1/1:2,14:16:35.48:458,35,0	0/0:10,0:10:24.07:0,24,272	0/0:7,0:7:18.04:0,18,193	0/0:16,0:16:45.10:0,45,489	0/0:12,0:12:26.41:0,26,260	0/0:8,0:8:24.07:0,24,268	0/0:12,0:12:30.06:0,30,326	0/0:13,0:13:39.08:0,39,415	0/0:8,0:8:23.80:0,24,242	0/0:5,0:5:15.03:0,15,161	0/0:8,0:8:15.04:0,15,169
chr10	73007446	.	TC	T	568.21	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.316;DP=456;FS=0.839;HRun=7;HaplotypeScore=59.3921;InbreedingCoeff=0.9669;MQ=79.85;MQ0=1;MQRankSum=-1.748;QD=19.59;ReadPosRankSum=1.668;VQSLOD=3.2348;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,15:19:39.08:427,39,0	0/0:11,0:11:33.11:0,33,451	0/0:26,0:25:40.04:0,40,618	0/0:13,0:12:23.50:0,24,257	0/0:15,0:15:32.19:0,32,445	0/0:16,0:16:39.12:0,39,532	0/0:19,0:19:51.16:0,51,680	0/0:15,0:15:27.05:0,27,335	0/0:17,0:17:51.16:0,51,682	0/0:13,0:13:36.12:0,36,491	0/0:26,0:26:69.23:0,69,940	0/0:17,0:17:47.51:0,48,605	0/0:11,0:11:30.06:0,30,389	0/0:12,0:12:36.12:0,36,491	0/0:18,0:18:54.17:0,54,726	0/0:17,0:17:51.16:0,51,683	0/0:21,0:21:60.20:0,60,813	1/1:3,7:10:25.30:262,25,0	0/0:23,0:23:60.19:0,60,802	0/0:21,0:21:54.18:0,54,738	0/0:15,0:15:45.12:0,45,577	0/0:10,0:10:27.09:0,27,369	0/0:14,0:13:33.11:0,33,450	0/0:14,0:14:33.11:0,33,450	0/0:18,0:18:41.97:0,42,540	0/0:17,0:17:45.15:0,45,612	0/0:23,0:23:63.21:0,63,858	0/0:4,0:4:9.03:0,9,123
chr10	73007474	.	CA	C	2108.90	PASS	AB=0.729;AC=18;AF=0.321;AN=56;BaseQRankSum=5.717;DP=475;FS=14.159;HRun=12;HaplotypeScore=65.0877;InbreedingCoeff=0.6655;MQ=76.48;MQ0=1;MQRankSum=0.771;QD=10.49;ReadPosRankSum=4.916;VQSLOD=1.2880;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:25:56.42:0,56,310	0/0:10,0:10:27.02:0,27,253	0/0:20,1:19:24.47:0,24,173	0/0:12,0:11:10.99:0,11,71	0/0:15,0:15:30.03:0,30,288	0/1:12,2:14:10.42:10,0,258	0/0:17,2:19:24.86:0,25,434	0/0:18,0:20:38.86:0,39,356	0/0:18,0:18:43.30:0,43,412	1/1:3,8:12:25.93:192,26,0	1/1:8,16:24:41.73:325,42,0	1/1:7,16:23:46.82:354,47,0	1/1:5,7:13:19.89:145,20,0	0/0:20,1:21:18.84:0,19,367	0/0:12,1:13:6.80:0,7,241	0/0:14,1:15:18.84:0,19,367	0/1:8,17:26:29.55:339,0,30	0/0:9,0:12:20.73:0,21,124	0/1:15,3:19:48.09:48,0,187	0/0:16,0:16:27.03:0,27,258	0/0:15,0:18:33.37:0,33,363	1/1:4,10:15:6.32:149,6,0	0/1:5,11:16:3.60:159,0,4	1/1:2,15:18:34.89:261,35,0	1/1:5,15:20:41.82:325,42,0	0/0:14,0:14:27.05:0,27,274	0/0:17,0:17:38.98:0,39,354	0/0:8,0:8:18.04:0,18,183
chr10	73007625	.	T	TA	1227.18	PASS	AB=0.741;AC=18;AF=0.321;AN=56;BaseQRankSum=-4.581;DP=487;FS=0.530;HRun=13;HaplotypeScore=70.4608;InbreedingCoeff=0.5337;MQ=78.02;MQ0=0;MQRankSum=0.056;QD=7.22;ReadPosRankSum=-0.567;VQSLOD=2.3923;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:9.06:0,9,23	0/0:3,0:3:2.96:0,3,21	0/1:20,1:19:25.43:60,0,25	0/0:14,0:14:3.87:0,4,39	0/0:15,0:15:17.71:0,18,123	0/0:21,0:22:46.50:0,46,309	0/0:20,0:24:44.71:0,45,285	0/0:25,0:25:35.65:0,36,261	0/0:20,0:22:47.12:0,47,296	1/1:3,13:17:26.85:232,27,0	1/1:7,13:20:13.94:260,14,0	1/1:5,14:19:17.85:149,18,0	1/1:5,9:14:12.01:111,12,0	0/0:21,1:22:16.07:0,16,241	0/0:20,0:20:32.53:0,33,224	0/0:18,0:19:43.46:0,43,284	0/1:8,13:21:9.20:119,0,9	0/0:15,1:16:13.17:0,13,33	0/0:14,2:17:0.89:0,1,142	0/0:15,0:17:25.35:0,25,154	0/0:18,1:19:7.76:0,8,197	1/1:2,9:12:15.85:130,16,0	0/1:6,8:14:1.09:122,0,1	1/1:3,8:13:0.11:120,0,0	1/1:6,8:14:9.90:85,10,0	0/0:14,2:16:1.82:0,2,157	0/0:20,0:21:44.91:0,45,298	0/1:2,1:3:14.33:22,0,14
chr10	73007638	.	AGGAT	A	846.18	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=4.404;DP=474;FS=7.197;HRun=0;HaplotypeScore=83.1256;InbreedingCoeff=0.6692;MQ=74.30;MQ0=0;MQRankSum=0.493;QD=15.11;ReadPosRankSum=2.015;VQSLOD=2.1928;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:21.07:397,21,0	0/0:3,0:3:6.02:0,6,110	0/1:18,0:15:26.75:27,0,460	0/0:13,0:13:2.14:0,2,292	0/0:16,0:16:45.15:0,45,1049	0/0:19,0:19:51.18:0,51,1259	0/0:19,0:19:51.17:0,51,1150	0/0:25,0:25:66.23:0,66,1500	0/0:21,0:21:54.19:0,54,1295	0/0:20,0:20:54.19:0,54,1219	0/0:23,0:23:60.21:0,60,1314	0/0:17,0:17:26.98:0,27,556	0/0:8,0:8:15.05:0,15,275	0/0:23,0:23:51.11:0,51,1157	0/0:18,0:18:45.14:0,45,1064	0/0:18,0:18:51.17:0,51,1194	0/0:21,0:21:36.11:0,36,777	1/1:2,12:14:30.10:550,30,0	0/0:21,0:21:63.17:0,63,1448	0/0:16,0:16:45.15:0,45,987	0/0:23,0:23:66.23:0,66,1572	0/0:9,0:9:24.08:0,24,471	0/0:13,0:13:33.11:0,33,723	0/0:12,0:12:30.10:0,30,670	0/0:11,0:11:15.05:0,15,287	0/0:21,0:21:63.21:0,63,1460	0/0:23,0:22:63.22:0,63,1507	0/0:5,0:5:15.05:0,15,336
chr10	73008582	.	AGCTCG	A	3071.53	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.724;DP=598;FS=6.207;HRun=0;HaplotypeScore=116.3109;InbreedingCoeff=0.9136;MQ=82.40;MQ0=0;MQRankSum=-2.307;QD=40.41;ReadPosRankSum=5.259;VQSLOD=3.1385;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,43:45:75.72:1629,76,0	0/0:8,0:8:24.08:0,24,760	0/0:14,0:14:33.05:0,33,741	0/0:22,0:23:43.77:0,44,1114	0/0:14,0:14:42.14:0,42,1279	0/0:19,0:19:54.19:0,54,1690	0/0:30,0:30:84.29:0,84,2588	0/0:19,0:19:54.19:0,54,1670	0/0:16,0:16:42.14:0,42,1331	0/0:10,0:10:27.09:0,27,848	0/0:8,0:8:24.08:0,24,748	0/0:24,0:24:66.17:0,66,1939	0/0:14,0:14:39.12:0,39,1152	0/0:26,0:26:78.27:0,78,2422	0/0:17,0:17:47.87:0,48,1452	0/0:21,0:21:54.19:0,54,1675	0/0:33,0:33:99:0,99,3100	1/1:1,30:31:72.25:1563,72,0	0/0:21,0:21:60.20:0,60,1767	0/0:10,0:10:30.10:0,30,924	0/0:75,0:75:99:0,220,6765	0/0:14,0:14:39.13:0,39,1221	0/0:13,0:13:39.09:0,39,1123	0/0:27,0:27:81.26:0,81,2445	0/0:16,0:16:48.16:0,48,1474	0/0:30,1:31:28.34:0,28,2678	0/0:18,0:18:54.16:0,54,1465	0/0:1,0:1:3.01:0,3,95
chr10	73008733	.	T	TG	3088.87	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.453;DP=571;FS=1.583;HRun=0;HaplotypeScore=54.8747;InbreedingCoeff=0.9979;MQ=84.33;MQ0=0;MQRankSum=-2.746;QD=41.74;ReadPosRankSum=1.365;VQSLOD=4.2074;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,48:48:99:2060,129,0	0/0:8,0:8:24.08:0,24,336	0/0:18,0:18:54.13:0,54,707	0/0:16,0:16:45.12:0,45,602	0/0:17,0:17:45.15:0,45,629	0/0:11,0:11:33.10:0,33,445	0/0:18,0:18:54.15:0,54,718	0/0:26,0:26:78.24:0,78,1060	0/0:21,0:21:63.21:0,63,880	0/0:15,0:15:41.42:0,41,583	0/0:10,0:10:27.09:0,27,378	0/0:20,0:20:57.19:0,57,797	0/0:22,0:22:66.22:0,66,923	0/0:28,0:28:84.28:0,84,1174	0/0:14,0:14:42.14:0,42,587	0/0:19,0:19:57.19:0,57,796	0/0:32,0:32:96.32:0,96,1341	1/1:0,26:26:72.25:1150,72,0	0/0:19,0:19:57.14:0,57,758	0/0:14,0:14:42.14:0,42,585	0/0:41,0:41:99:0,123,1700	0/0:13,0:13:39.13:0,39,546	0/0:14,0:14:39.13:0,39,545	0/0:31,0:30:90.26:0,90,1237	0/0:17,0:17:45.15:0,45,629	0/0:26,0:26:75.24:0,75,1034	0/0:17,0:17:45.13:0,45,611	0/0:10,0:10:30.10:0,30,420
chr10	73010123	.	GGT	G	231.77	PASS	AB=1.000;AC=15;AF=0.441;AN=34;BaseQRankSum=1.363;DP=544;FS=17.413;HRun=0;HaplotypeScore=74.3643;InbreedingCoeff=0.2507;MQ=69.28;MQ0=17;MQRankSum=-0.444;QD=1.21;ReadPosRankSum=1.775;VQSLOD=-0.3148;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:35:2.84:14,3,0	./.	./.	./.	0/0:15,0:15:3.01:0,3,41	0/1:25,0:24:25.07:25,0,37	1/1:23,0:24:5.84:43,6,0	./.	0/0:12,0:12:2.99:0,3,24	./.	0/0:7,0:8:0:0,0,0	0/0:22,0:22:8.72:0,9,75	./.	0/1:17,0:16:24.54:25,0,37	0/0:26,0:24:6:0,6,53	./.	1/1:23,0:24:2.84:14,3,0	0/0:22,0:22:0:0,0,0	./.	./.	0/0:46,0:46:8.99:0,9,74	./.	1/1:9,0:8:0.88:2,1,0	1/1:25,4:29:20.72:184,21,0	1/1:13,0:14:5.68:28,6,0	./.	0/0:10,0:10:6.02:0,6,87	0/1:12,0:12:13.48:13,0,159
chr10	73012657	.	A	ATGTTGTTGTTGTTGTTGT	7863.10	PASS	AB=0.958;AC=19;AF=0.339;AN=56;BaseQRankSum=0.703;DP=841;FS=7.871;HRun=0;HaplotypeScore=328.2915;InbreedingCoeff=0.8495;MQ=65.22;MQ0=3;MQRankSum=-8.876;QD=26.48;ReadPosRankSum=-3.677;VQSLOD=1.9732;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:68:38.95:0,39,1415	0/0:14,0:14:30.05:0,30,1091	0/0:50,0:37:11:0,11,145	0/0:37,0:28:26.50:0,27,389	0/0:30,0:34:66.67:0,67,2253	0/0:31,0:31:42.13:0,42,1477	0/0:22,0:22:42.12:0,42,1447	0/0:38,0:38:46.33:0,46,752	0/0:19,0:19:42.12:0,42,1358	1/1:16,16:47:66.23:3546,66,0	1/1:9,6:20:8.99:329,9,0	1/1:11,0:33:18.06:689,18,0	1/1:10,0:30:18.06:553,18,0	0/0:23,0:23:42.14:0,42,1560	0/0:24,0:25:51.14:0,51,1696	0/0:33,0:33:69.24:0,69,2425	1/1:12,12:28:15.05:946,15,0	0/0:12,0:38:53.82:0,54,956	0/0:18,0:18:14.77:0,15,340	0/0:12,0:13:30.09:0,30,951	0/0:43,0:43:69.22:0,69,2520	1/1:12,0:23:6.02:149,6,0	1/1:13,0:24:15.01:444,15,0	1/1:13,0:42:21.07:744,21,0	1/1:11,6:27:3.01:253,3,0	0/1:22,1:23:99:211,0,909	0/0:25,0:25:38.49:0,38,1443	0/0:12,0:13:26.96:0,27,604
chr10	73013615	.	T	TG	2386.10	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-7.378;DP=584;FS=1.531;HRun=7;HaplotypeScore=61.2169;InbreedingCoeff=0.9605;MQ=89.73;MQ0=0;MQRankSum=-1.350;QD=26.81;ReadPosRankSum=0.926;VQSLOD=4.3753;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,111,1071	0/0:13,0:13:36.06:0,36,348	0/0:24,0:24:44.13:0,44,483	0/0:20,0:20:33.34:0,33,317	0/0:15,0:15:42.06:0,42,400	0/0:18,0:18:45.05:0,45,429	0/0:23,0:23:66.09:0,66,631	0/0:25,0:25:51.07:0,51,490	0/0:12,0:12:3.37:0,3,208	0/0:28,0:28:66.09:0,66,633	0/0:22,0:22:63.10:0,63,608	1/1:2,15:17:48.15:579,48,0	1/1:3,12:15:33.10:399,33,0	0/0:16,0:16:42.06:0,42,406	0/0:17,0:17:45.07:0,45,434	0/0:15,0:15:42.06:0,42,405	0/0:43,0:43:99:0,108,1043	0/0:23,0:23:60.09:0,60,579	0/0:16,0:16:33.03:0,33,314	0/0:20,0:20:54.07:0,54,513	0/0:27,0:27:72.11:0,72,695	1/1:3,18:21:45.14:542,45,0	1/1:4,13:17:42.12:497,42,0	1/1:4,15:19:45.14:544,45,0	0/0:23,0:23:49.30:0,49,462	0/0:24,0:24:66.09:0,66,632	0/0:20,0:20:57.09:0,57,550	0/0:8,0:8:18.02:0,18,174
chr10	73014009	.	CTT	C	523.47	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.562;DP=678;FS=7.566;HRun=4;HaplotypeScore=88.4847;InbreedingCoeff=0.9983;MQ=87.61;MQ0=0;MQRankSum=-1.153;QD=37.39;ReadPosRankSum=2.307;VQSLOD=2.7556;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.21:0,93,1549	0/0:9,0:9:27.08:0,27,476	0/0:22,0:22:63.21:0,63,1062	0/0:27,0:27:79.10:0,79,1304	0/0:25,0:25:75.25:0,75,1361	0/0:15,0:15:42.14:0,42,758	0/0:29,0:29:87.29:0,87,1586	0/0:24,0:24:63.19:0,63,1068	0/0:15,0:15:42.14:0,42,745	0/0:43,0:43:99:0,126,2331	0/0:23,0:23:69.23:0,69,1260	0/0:24,0:24:72.20:0,72,1305	0/0:24,0:24:69.24:0,69,1271	0/0:20,0:20:60.21:0,60,1124	0/0:24,0:24:69.24:0,69,1293	0/0:28,0:28:81.26:0,81,1453	0/0:24,0:23:72.25:0,72,1348	1/1:0,14:14:42.14:618,42,0	0/0:26,0:26:78.23:0,78,1312	0/0:33,0:33:96.31:0,96,1741	0/0:32,0:32:96.32:0,96,1760	0/0:26,0:26:78.23:0,78,1420	0/0:15,0:15:36.12:0,36,674	0/0:33,0:33:99:0,99,1780	0/0:21,0:21:60.19:0,60,1053	0/0:31,0:31:93.32:0,93,1738	0/0:27,0:27:78.27:0,78,1436	0/0:10,0:10:30.10:0,30,562
chr10	73014154	.	A	AGTGTGTGTGTGT	3933.97	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-0.956;DP=711;FS=1.500;HRun=0;HaplotypeScore=233.9871;InbreedingCoeff=0.8299;MQ=58.78;MQ0=8;MQRankSum=-8.236;QD=20.60;ReadPosRankSum=-2.319;VQSLOD=2.4683;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:33:20.55:384,21,0	0/0:6,0:7:18.06:0,18,567	0/0:28,0:14:8.62:0,9,103	0/0:21,0:11:4.25:0,4,70	0/0:21,0:21:42.14:0,42,1380	0/0:22,0:24:42.14:0,42,1300	0/0:22,0:24:45.14:0,45,1298	0/0:24,0:25:35.88:0,36,673	0/0:24,0:25:51.14:0,51,1515	0/0:29,0:32:57.18:0,57,1701	0/0:27,0:28:51.15:0,51,1441	1/1:11,4:23:9.03:529,9,0	1/1:9,7:27:19.62:1000,20,0	0/0:21,0:22:57.02:0,57,1889	0/0:30,0:30:69.21:0,69,2195	0/0:29,0:31:72.25:0,72,2284	0/0:28,0:31:63.17:0,63,1981	0/0:4,0:12:12.51:0,13,298	0/1:12,0:11:16.64:17,0,435	0/0:24,0:25:48.16:0,48,1538	0/0:32,0:32:81.25:0,81,2431	1/1:20,3:32:11.84:645,12,0	1/1:9,5:24:11.74:644,12,0	1/1:26,4:37:18.06:715,18,0	0/0:20,0:22:51.16:0,51,1479	0/0:27,0:30:54.18:0,54,1522	0/0:31,0:30:54.18:0,54,1617	0/0:17,0:18:30.10:0,30,954
chr10	73015327	.	C	CTGTGTGTGTG	253.84	PASS	AB=1.000;AC=4;AF=0.074;AN=54;BaseQRankSum=5.258;DP=480;FS=1.179;HRun=0;HaplotypeScore=141.5647;InbreedingCoeff=0.2222;MQ=43.80;MQ0=28;MQRankSum=-2.093;QD=5.29;ReadPosRankSum=-2.260;VQSLOD=2.0940;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:15.05:0,15,373	0/0:3,0:3:2.35:0,2,96	0/0:5,0:1:3.01:0,3,32	./.	0/0:25,0:25:54.17:0,54,1481	0/0:22,0:21:42.14:0,42,1334	0/0:37,0:36:41.63:0,42,866	0/0:20,0:20:57:0,57,1093	0/0:15,0:14:27.09:0,27,845	0/0:26,0:20:20.17:0,20,1464	0/0:5,0:4:3.01:0,3,102	1/1:21,0:20:11.52:148,12,0	0/1:12,0:10:99:169,0,182	0/0:18,0:17:28.70:0,29,814	0/0:23,0:22:48.13:0,48,1339	0/0:18,0:18:39.13:0,39,1136	0/0:11,0:9:3.93:0,4,233	0/0:22,0:20:57.20:0,57,1614	0/0:6,0:6:15:0,15,279	0/0:12,0:11:15.42:0,15,310	0/0:33,0:32:34:0,34,898	0/1:15,0:13:9.29:44,0,9	0/0:10,0:9:0.32:0,0,138	0/0:13,4:16:6.02:0,6,101	0/0:12,0:11:5.52:0,6,144	0/0:37,0:36:91.93:0,92,2764	0/0:20,0:18:54.12:0,54,1421	0/0:7,0:3:6.02:0,6,188
chr10	73016429	.	CCA	C	5065.35	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.494;DP=583;FS=2.169;HRun=0;HaplotypeScore=77.0922;InbreedingCoeff=0.9646;MQ=72.96;MQ0=1;MQRankSum=-2.000;QD=28.62;ReadPosRankSum=2.772;VQSLOD=5.8068;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.26:0,75,1231	0/0:7,0:7:18.06:0,18,296	0/0:30,0:29:64.14:0,64,1032	0/0:17,0:14:23.95:0,24,359	0/0:8,0:8:6.02:0,6,100	0/0:16,0:16:36.12:0,36,594	0/0:28,1:29:37.04:0,37,1132	0/0:24,0:24:63.22:0,63,1050	0/0:15,0:15:39.13:0,39,648	1/1:4,14:18:45.14:561,45,0	1/1:3,8:11:15.05:191,15,0	1/1:8,13:21:36.11:455,36,0	1/1:3,20:23:26.13:727,26,0	0/0:28,0:28:75.26:0,75,1248	0/0:25,0:25:66.21:0,66,1065	0/0:14,0:14:42.14:0,42,703	1/1:4,37:41:99:1299,102,0	0/0:33,0:33:78.27:0,78,1300	0/0:19,0:19:36.12:0,36,597	0/0:16,0:16:42.14:0,42,700	0/0:54,1:55:99:0,106,2321	1/1:3,4:7:9.03:115,9,0	1/1:1,9:10:21.03:267,21,0	1/1:3,34:36:87.28:1108,87,0	1/1:1,8:9:27.09:344,27,0	0/0:17,0:17:51.17:0,51,843	0/0:20,0:20:54.18:0,54,902	0/0:6,0:6:12.02:0,12,174
chr10	73016871	.	GTTGTT	G	8293.23	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.768;DP=693;FS=0.000;HRun=0;HaplotypeScore=126.1145;InbreedingCoeff=0.9939;MQ=70.09;MQ0=3;MQRankSum=2.815;QD=29.30;ReadPosRankSum=4.397;VQSLOD=4.6623;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,35:45:66.23:1220,66,0	0/0:10,0:10:24.08:0,24,647	0/0:46,0:38:29.11:0,29,569	0/0:33,0:21:12.03:0,12,255	0/0:29,0:29:54.18:0,54,1422	0/0:20,0:20:42.14:0,42,1164	0/0:15,0:15:27.09:0,27,666	0/0:20,0:20:30.10:0,30,667	0/0:19,0:19:54.19:0,54,1424	1/1:7,12:19:36.12:665,36,0	1/1:7,15:22:42.14:698,42,0	1/1:7,12:19:24.08:444,24,0	1/1:4,13:17:27.09:499,27,0	0/0:15,0:15:30.10:0,30,816	0/0:32,0:32:75.26:0,75,2087	0/0:27,0:27:57.19:0,57,1583	1/1:10,40:50:90.31:1646,90,0	1/1:8,17:25:39.13:721,39,0	0/0:25,0:24:39.08:0,39,941	0/0:36,0:36:81.28:0,81,2112	0/0:25,0:25:57.20:0,57,1609	1/1:6,15:21:30.06:500,30,0	1/1:6,16:22:38.96:682,39,0	1/1:3,16:19:24.08:444,24,0	1/1:8,16:24:42.14:776,42,0	0/0:17,0:17:30.10:0,30,801	0/0:20,0:20:33.07:0,33,746	0/0:19,0:19:42.14:0,42,1107
chr10	73018048	.	C	CAG	1807.52	PASS	AB=0.852;AC=29;AF=0.558;AN=52;BaseQRankSum=-0.122;DP=564;FS=3.398;HRun=0;HaplotypeScore=98.6585;InbreedingCoeff=-0.1476;MQ=67.48;MQ0=9;MQRankSum=-0.953;QD=4.22;ReadPosRankSum=-1.107;VQSLOD=2.1675;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:11.98:102,12,0	./.	./.	0/1:40,0:16:0:0,0,0	0/0:15,0:17:2.78:0,3,14	0/0:13,0:19:2.84:0,3,14	0/1:23,0:23:66.85:94,0,67	1/1:22,0:21:0.40:0,0,0	0/0:19,0:20:19.88:0,20,159	1/1:20,0:19:24.04:265,24,0	1/1:10,0:10:2.94:25,3,0	0/1:13,7:21:36:118,0,36	1/1:16,8:23:10.03:211,10,0	0/0:18,0:20:21.34:0,21,199	0/1:12,6:20:99:184,0,113	0/1:8,7:15:20.22:121,0,20	1/1:11,1:25:21.02:203,21,0	0/0:9,0:19:2.14:0,2,88	0/1:11,3:14:25.74:39,0,26	0/1:20,0:20:23.46:47,0,23	0/1:17,0:17:20.22:99,0,20	0/1:20,7:27:32.25:32,0,72	1/1:13,0:16:3:26,3,0	0/1:8,4:13:15.22:166,0,15	1/1:17,0:15:2.93:26,3,0	0/1:17,1:21:57.34:115,0,57	0/1:13,1:20:50.12:50,0,104	0/1:7,0:7:16.87:37,0,17
chr10	73018053	.	A	AGAGC	575.58	PASS	AB=0.956;AC=8;AF=0.143;AN=56;BaseQRankSum=6.430;DP=565;FS=2.597;HRun=0;HaplotypeScore=117.9086;InbreedingCoeff=-0.1667;MQ=61.76;MQ0=13;MQRankSum=-3.025;QD=3.51;ReadPosRankSum=0.103;VQSLOD=2.2941;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,17:38:73.34:145,0,73	0/0:8,0:8:22.96:0,23,171	0/0:27,0:15:29.19:0,29,316	0/0:37,0:12:19.58:0,20,209	0/0:16,0:16:26.78:0,27,222	0/0:25,0:24:50.92:0,51,430	0/0:22,0:22:38.80:0,39,413	0/0:22,0:21:53.01:0,53,449	0/0:21,0:21:54.03:0,54,600	0/1:20,0:20:99:224,0,227	0/0:10,0:10:6.46:0,6,49	0/0:21,0:21:37.16:0,37,359	0/0:24,0:23:42.11:0,42,339	0/0:22,0:22:54.36:0,54,632	0/0:19,0:19:34.40:0,34,399	0/0:14,0:14:22.41:0,22,215	0/1:26,0:26:86.98:248,0,87	0/0:20,0:20:47.96:0,48,478	0/0:14,0:14:37.11:0,37,272	0/0:19,0:19:36.74:0,37,318	0/1:18,0:17:31.94:32,0,253	0/0:26,0:26:48.31:0,48,465	0/1:18,0:17:24.49:24,0,114	0/0:13,0:13:19.10:0,19,168	0/1:18,0:16:13.49:13,0,117	0/0:21,0:21:14.66:0,15,508	0/1:18,0:18:13.79:14,0,315	0/1:7,0:6:6.93:7,0,85
chr10	73018543	.	C	CAAAAA	1052.26	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=2.869;DP=306;FS=3.886;HRun=13;HaplotypeScore=133.7885;InbreedingCoeff=0.6878;MQ=56.04;MQ0=0;MQRankSum=-4.005;QD=12.53;ReadPosRankSum=-3.582;VQSLOD=0.0565;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:6.18:72,6,0	0/0:5,0:5:5.81:0,6,87	0/0:9,0:8:0.25:0,0,169	0/0:7,0:5:2.72:0,3,25	0/0:11,0:11:11.14:0,11,173	0/0:13,0:13:20.70:0,21,305	0/0:10,0:10:14.55:0,15,211	0/0:16,0:16:20.54:0,21,288	0/0:18,0:18:23.25:0,23,348	1/1:13,1:16:24.07:507,24,0	1/1:8,1:9:5.38:88,5,0	0/1:2,0:2:0:0,0,0	1/1:4,0:4:3.01:63,3,0	0/0:14,0:14:26.57:0,27,372	0/0:24,0:26:27.72:0,28,585	0/0:8,0:8:17.90:0,18,261	1/1:7,2:9:6.96:133,7,0	1/1:4,0:4:5.99:76,6,0	0/0:13,0:16:14.42:0,14,388	0/0:16,0:17:29.55:0,30,421	0/0:20,0:20:16.86:0,17,260	0/1:3,0:3:0:0,0,0	1/1:6,0:6:3.01:67,3,0	0/1:1,0:1:0:0,0,0	1/1:11,0:13:12.04:214,12,0	0/0:18,0:18:17.01:0,17,234	0/0:10,0:11:26.87:0,27,357	0/0:3,0:3:9.03:0,9,131
chr10	73018574	.	T	TC	4344.93	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.632;DP=439;FS=85.543;HRun=1;HaplotypeScore=115.5497;InbreedingCoeff=0.8237;MQ=79.99;MQ0=0;MQRankSum=-4.814;QD=10.70;ReadPosRankSum=0.166;VQSLOD=1.0750;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:23.53:125,24,0	1/1:4,1:5:12.94:78,13,0	0/0:22,0:22:49.59:0,50,381	0/0:11,0:11:29.80:0,30,235	1/1:19,1:20:20.18:134,20,0	1/1:14,0:14:14.40:62,14,0	1/1:15,0:15:29.16:140,29,0	1/1:16,0:16:32.06:232,32,0	1/1:22,0:22:2.70:157,3,0	1/1:25,0:25:59.18:411,59,0	1/1:14,0:14:20.52:111,21,0	1/1:10,0:10:26.07:143,26,0	1/1:13,0:13:27.93:145,28,0	1/1:18,0:18:22.15:134,22,0	1/1:28,1:29:43.53:308,44,0	1/1:18,0:18:34.23:168,34,0	1/1:18,0:18:33.33:175,33,0	1/1:6,0:6:13.59:66,14,0	1/1:22,1:23:45.83:322,46,0	1/1:16,3:19:35.64:217,36,0	1/1:33,0:33:70.72:371,71,0	1/1:10,0:10:27.09:150,27,0	1/1:11,0:11:28.91:156,29,0	1/1:5,0:5:14.40:75,14,0	1/1:13,0:13:19.83:115,20,0	1/1:20,0:20:44.31:212,44,0	1/1:14,1:15:20.39:120,20,0	1/1:3,0:3:5.88:19,6,0
chr10	73021664	.	A	AGGGGTCTCCT	9992.75	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-9.131;DP=682;FS=2.796;HRun=0;HaplotypeScore=190.8759;InbreedingCoeff=0.9902;MQ=85.66;MQ0=0;MQRankSum=-11.360;QD=80.59;ReadPosRankSum=1.053;VQSLOD=4.9676;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,135,3912	0/0:6,0:6:18.06:0,18,536	0/0:28,0:28:33.88:0,34,1255	0/0:21,0:21:52.58:0,53,1189	0/0:34,0:34:93.31:0,93,2749	0/0:21,0:21:51.16:0,51,1524	0/0:23,0:23:66.23:0,66,1930	0/0:25,0:25:42.14:0,42,1245	0/0:12,0:12:33.11:0,33,1031	1/1:5,25:40:99:4733,105,0	1/1:9,6:18:12.04:612,12,0	0/0:29,0:29:81.21:0,81,2322	0/0:14,0:14:39.12:0,39,1089	0/0:29,0:29:69.22:0,69,2004	0/0:26,0:26:57.18:0,57,1643	0/0:27,0:27:69.22:0,69,2052	1/1:10,10:25:30.10:1430,30,0	1/1:10,8:23:36.12:1841,36,0	0/0:24,0:24:51.14:0,51,1402	0/0:29,0:29:81.27:0,81,2454	0/0:33,0:33:84.27:0,84,2527	0/0:30,0:30:72.23:0,72,2159	0/0:22,0:22:57.18:0,57,1712	0/0:20,0:20:57.18:0,57,1683	1/1:5,10:18:27.09:1377,27,0	0/0:29,0:29:81.25:0,81,2274	0/0:19,0:19:42.14:0,42,1225	0/0:9,0:9:27.09:0,27,737
chr10	73022154	.	CATGATAGCA	C	5323	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.010;DP=688;FS=0.482;HRun=0;HaplotypeScore=187.2321;InbreedingCoeff=0.9711;MQ=81.94;MQ0=0;MQRankSum=-10.186;QD=71.93;ReadPosRankSum=-0.825;VQSLOD=4.6607;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,6653	0/0:12,0:12:36.12:0,36,1702	0/0:20,0:20:60.21:0,60,2724	0/0:26,0:26:72.23:0,72,2930	0/0:26,0:26:78.27:0,78,3608	0/0:27,0:26:81.26:0,81,3703	0/0:31,0:31:90.29:0,90,4207	0/0:29,0:29:84.27:0,84,3618	0/0:38,0:38:99:0,114,5459	1/1:1,26:27:78.25:2239,78,0	1/1:0,15:15:36.08:979,36,0	0/0:15,0:15:45.15:0,45,2232	0/0:20,0:20:60.21:0,60,2565	0/0:27,0:27:78.27:0,78,3766	0/0:20,0:20:60.21:0,60,2883	0/0:27,0:27:81.28:0,81,3889	1/1:2,18:20:39.07:1154,39,0	0/0:25,0:25:75.22:0,75,3516	0/0:18,0:18:51.18:0,51,2354	0/0:37,0:37:99:0,108,4626	0/0:30,0:30:87.28:0,87,4049	0/0:29,0:29:87.30:0,87,4060	0/0:28,0:28:84.27:0,84,3853	0/0:21,0:21:54.19:0,54,2643	1/1:1,11:12:33.11:950,33,0	0/0:31,0:32:6.87:0,7,4152	0/0:25,0:25:75.26:0,75,3478	0/0:5,0:5:15.05:0,15,744
chr10	73022727	.	ACTCTCTCTCTCTCTCT	A	1343.40	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=5.554;DP=583;FS=13.918;HRun=0;HaplotypeScore=220.2968;InbreedingCoeff=0.7526;MQ=71.22;MQ0=15;MQRankSum=-3.941;QD=15.44;ReadPosRankSum=0.812;VQSLOD=1.2711;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:21.07:0,21,1144	./.	0/0:31,0:18:0:0,0,0	0/0:43,0:22:0.47:0,0,1	./.	0/0:15,0:15:18.06:0,18,1102	0/0:23,0:23:27.09:0,27,1523	0/0:50,0:48:29.16:0,29,633	0/0:11,0:11:13.29:0,13,647	0/0:15,0:15:18.06:0,18,928	0/0:16,0:16:2.89:0,3,192	1/1:13,4:17:6.02:224,6,0	1/1:10,7:18:9.03:374,9,0	0/0:19,0:19:12.04:0,12,663	0/0:26,0:27:27.09:0,27,1530	0/0:20,0:21:32.73:0,33,1944	0/0:22,0:22:48.15:0,48,2274	0/0:17,0:16:24.08:0,24,1274	0/0:15,0:15:12.04:0,12,579	0/0:20,0:20:15.05:0,15,751	0/0:22,0:20:24.08:0,24,1343	1/1:11,4:15:9.03:373,9,0	1/1:15,5:21:12.51:462,13,0	1/1:14,0:14:3.01:54,3,0	0/0:18,0:18:9:0,9,583	0/0:27,0:27:40.43:0,40,2041	0/0:25,0:25:40.95:0,41,2109	0/0:17,0:15:10.59:0,11,446
chr10	73023538	.	ACTCTCT	A	419.05	PASS	AB=0.857;AC=7;AF=0.125;AN=56;BaseQRankSum=1.747;DP=579;FS=0.000;HRun=0;HaplotypeScore=122.7485;InbreedingCoeff=0.4778;MQ=67.85;MQ0=12;MQRankSum=-0.978;QD=6.87;ReadPosRankSum=-0.432;VQSLOD=2.2142;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:45.14:0,45,1038	0/0:6,0:6:6.02:0,6,175	0/0:28,0:16:0:0,0,0	0/0:39,0:20:2.51:0,3,7	0/0:12,0:12:3.01:0,3,96	0/0:29,0:29:33.09:0,33,822	0/0:22,0:21:21.07:0,21,640	0/0:35,0:33:6.48:0,6,88	0/0:17,0:17:21.05:0,21,548	0/0:13,0:11:6.01:0,6,62	0/0:19,0:19:24.08:0,24,472	1/1:16,0:16:12.04:210,12,0	1/1:13,4:17:9.03:182,9,0	0/0:10,0:10:15.05:0,15,310	0/0:21,0:20:18.06:0,18,409	0/0:15,0:21:9.03:0,9,209	0/0:30,0:30:21.07:0,21,585	0/0:21,0:21:14.91:0,15,346	0/0:11,0:11:5.05:0,5,63	0/0:20,0:21:5.14:0,5,96	0/0:28,0:27:33.08:0,33,758	1/1:10,0:9:3.01:53,3,0	0/1:15,3:18:8.24:101,0,8	0/0:19,8:28:2.99:0,3,23	0/0:14,0:14:3.01:0,3,39	0/0:21,0:21:24.07:0,24,610	0/0:28,0:28:48.15:0,48,1216	0/0:9,0:8:6.02:0,6,171
chr10	73025398	.	TGG	T	1656.87	PASS	AB=0.653;AC=14;AF=0.250;AN=56;BaseQRankSum=2.927;DP=401;FS=1.049;HRun=11;HaplotypeScore=65.5960;InbreedingCoeff=0.5783;MQ=80.73;MQ0=2;MQRankSum=-0.617;QD=11.20;ReadPosRankSum=6.714;VQSLOD=0.9250;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:35:68.59:299,69,0	0/0:3,0:4:9:0,9,114	0/1:12,1:14:19.84:20,0,201	0/0:20,0:20:19.44:0,19,399	0/0:14,0:16:31.47:0,31,293	0/0:4,0:4:9:0,9,95	0/0:18,0:18:24.48:0,24,247	0/0:22,0:22:20.55:0,21,265	0/0:12,0:13:23.48:0,23,204	1/1:4,14:18:42.09:441,42,0	1/1:1,8:9:24.06:254,24,0	0/0:11,0:15:32.49:0,32,179	0/1:1,1:9:13.99:14,0,34	0/0:17,0:18:32.51:0,33,346	0/0:16,0:17:36.41:0,36,359	0/0:7,0:8:17.52:0,18,181	1/1:7,17:25:53.60:534,54,0	0/0:15,0:15:39.05:0,39,441	0/0:11,0:13:23.39:0,23,235	0/0:8,0:9:11.49:0,11,86	0/0:11,0:13:26.04:0,26,313	0/1:4,2:14:36.46:40,0,36	0/1:4,0:10:15.81:16,0,28	0/0:11,0:21:15.26:0,15,192	1/1:5,8:12:21.04:222,21,0	0/0:11,0:11:8.98:0,9,93	0/0:12,0:12:29.53:0,30,357	0/0:4,0:4:9:0,9,96
chr10	73025408	.	GGT	G	282.36	PASS	AB=0.952;AC=6;AF=0.107;AN=56;BaseQRankSum=5.883;DP=404;FS=15.137;HRun=0;HaplotypeScore=70.3401;InbreedingCoeff=0.2105;MQ=75.16;MQ0=2;MQRankSum=-0.085;QD=3.72;ReadPosRankSum=6.354;VQSLOD=0.1204;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:59.32:0,59,271	0/0:5,0:5:12.02:0,12,166	0/0:12,0:12:7.14:0,7,324	0/0:15,0:16:0.57:0,1,451	0/0:13,0:14:37.68:0,38,430	0/0:4,0:4:12.03:0,12,154	0/0:15,0:15:33.06:0,33,442	0/0:19,0:19:50.76:0,51,546	0/0:14,0:14:41.68:0,42,449	0/1:18,0:18:49.30:58,0,49	1/1:9,1:10:20.12:129,20,0	0/0:17,0:17:41.69:0,42,381	0/0:10,0:10:17:0,17,121	0/0:16,0:16:40.24:0,40,524	0/0:17,0:17:48.46:0,48,640	0/0:7,0:7:17.95:0,18,268	0/1:23,1:24:39.06:142,0,39	0/0:14,0:14:41.88:0,42,620	0/0:15,0:15:38.76:0,39,410	0/0:9,0:9:26.94:0,27,282	0/0:13,0:13:35.87:0,36,450	0/0:17,0:17:26.51:0,27,272	0/1:11,1:12:5.73:6,0,123	0/0:22,1:23:22.18:0,22,389	0/1:11,1:11:19.31:72,0,19	0/0:13,0:13:33.02:0,33,341	0/0:16,0:16:44.45:0,44,543	0/0:7,0:7:17.97:0,18,210
chr10	73025869	.	A	AAG	2747.20	PASS	AB=0.712;AC=19;AF=0.339;AN=56;BaseQRankSum=-1.423;DP=463;FS=3.591;HRun=0;HaplotypeScore=63.8093;InbreedingCoeff=0.7092;MQ=66.06;MQ0=27;MQRankSum=2.018;QD=14.16;ReadPosRankSum=5.862;VQSLOD=3.1665;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,22:29:35.54:492,36,0	0/0:4,0:4:8.97:0,9,71	0/0:24,0:8:3.98:0,4,75	0/0:42,0:18:4.44:0,4,63	0/0:14,0:14:38.97:0,39,393	0/0:18,0:18:44.95:0,45,478	0/0:12,0:11:29.98:0,30,315	0/0:26,0:26:69.80:0,70,685	0/0:10,0:9:26.95:0,27,248	1/1:4,2:20:50.87:481,51,0	0/1:2,0:9:2.89:36,0,3	1/1:4,6:9:5.77:210,6,0	0/1:4,3:4:10.93:41,0,11	0/0:12,0:12:24.01:0,24,248	0/0:6,0:6:18.04:0,18,201	0/0:4,0:4:12.03:0,12,143	1/1:8,2:33:13.90:367,14,0	0/0:28,0:22:41.97:0,42,418	0/0:17,0:15:44.99:0,45,438	0/0:10,0:9:23.91:0,24,228	0/0:6,0:4:8.93:0,9,67	1/1:2,6:7:14.97:200,15,0	1/1:1,13:14:21.93:326,22,0	1/1:3,13:16:30.04:435,30,0	1/1:1,3:18:27.01:320,27,0	0/1:19,1:22:40.17:40,0,464	0/0:19,0:18:29.92:0,30,463	0/0:15,0:15:44.85:0,45,434
chr10	73025878	.	AG	A	570.39	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.643;DP=443;FS=12.834;HRun=1;HaplotypeScore=65.4291;InbreedingCoeff=0.6156;MQ=75.81;MQ0=17;MQRankSum=-1.715;QD=20.37;ReadPosRankSum=-2.403;VQSLOD=2.1268;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:42.12:0,42,540	0/0:2,0:2:6.02:0,6,80	0/0:32,0:13:21.18:0,21,164	0/0:47,0:22:14.89:0,15,282	0/0:14,0:14:39.04:0,39,495	0/0:15,0:15:36.03:0,36,447	0/0:10,0:9:26.69:0,27,307	0/0:27,0:27:70.74:0,71,882	0/0:9,0:8:4.96:0,5,165	0/0:20,0:19:54.15:0,54,692	0/0:6,0:6:9.03:0,9,114	0/0:7,0:6:15.05:0,15,198	0/0:6,0:6:11.92:0,12,120	0/0:10,0:10:10.91:0,11,258	0/0:7,0:7:20.93:0,21,235	0/0:4,0:4:11.90:0,12,100	0/0:27,0:27:48.12:0,48,604	1/1:5,23:23:48.16:665,48,0	0/0:20,0:19:44.74:0,45,580	0/0:8,0:8:23.44:0,23,286	0/0:7,0:6:4.29:0,4,147	0/0:6,0:6:14.75:0,15,128	0/0:13,0:13:29.46:0,29,335	0/0:17,0:17:36.01:0,36,435	0/0:18,0:18:35.98:0,36,423	0/0:24,0:24:68.15:0,68,825	0/0:19,0:19:51.03:0,51,599	0/0:13,0:13:39.13:0,39,506
chr10	73026019	.	CT	C	1122.46	PASS	AB=0.918;AC=14;AF=0.250;AN=56;BaseQRankSum=4.197;DP=370;FS=0.000;HRun=15;HaplotypeScore=40.7472;InbreedingCoeff=0.6505;MQ=67.62;MQ0=2;MQRankSum=1.859;QD=7.85;ReadPosRankSum=2.537;VQSLOD=2.2058;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:23:46.20:290,46,0	0/0:6,0:6:12:0,12,105	0/0:21,0:9:2.98:0,3,21	0/0:12,0:6:8.33:0,8,50	0/1:15,2:17:5.55:6,0,202	0/0:15,0:17:32.83:0,33,278	0/0:7,1:8:4.73:0,5,165	0/0:39,2:41:29.40:0,29,520	0/0:1,0:1:3:0,3,26	1/1:4,9:14:28.55:176,29,0	1/1:1,9:10:26.56:170,27,0	0/0:6,0:6:14.58:0,15,111	0/0:7,0:8:19.64:0,20,145	0/0:7,0:6:12:0,12,106	0/0:6,0:6:9:0,9,79	0/0:3,0:3:6:0,6,53	1/1:10,18:29:29.76:319,30,0	1/1:6,10:17:25.60:157,26,0	0/0:20,1:22:19.54:0,20,278	0/1:11,1:16:7.83:8,0,139	0/0:9,0:9:4.93:0,5,130	0/0:2,0:2:3:0,3,26	0/0:4,0:5:5.83:0,6,38	0/0:13,0:13:20.99:0,21,181	1/1:2,13:16:28.61:179,29,0	0/0:17,1:17:32.31:0,32,320	0/0:9,0:9:17.96:0,18,149	0/0:11,0:12:29.09:0,29,272
chr10	73026334	.	A	ATG	395.52	PASS	AB=0.925;AC=13;AF=0.232;AN=56;BaseQRankSum=4.272;DP=540;FS=0.000;HRun=0;HaplotypeScore=90.1064;InbreedingCoeff=0.3869;MQ=60.61;MQ0=8;MQRankSum=-0.225;QD=2.37;ReadPosRankSum=-2.468;VQSLOD=1.4787;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,1:25:0.63:92,1,0	0/0:3,0:3:6.02:0,6,88	0/0:25,0:21:57.63:0,58,814	0/0:31,0:26:78.17:0,78,1115	0/0:10,0:10:15.05:0,15,222	0/0:26,0:26:47.31:0,47,654	0/0:25,0:25:66.22:0,66,965	0/0:19,0:17:48.15:0,48,682	0/0:24,0:24:53.91:0,54,771	0/1:18,0:17:5.20:47,0,5	0/0:10,0:10:8.89:0,9,62	0/1:30,1:31:2.81:146,0,3	1/1:20,0:20:9.08:106,9,0	0/0:13,0:13:28.63:0,29,381	0/0:20,0:20:48.15:0,48,696	0/0:15,0:15:42.11:0,42,579	0/1:23,0:24:18.25:18,0,89	0/0:22,0:20:30.78:0,31,496	0/0:22,0:22:54.59:0,55,750	0/0:22,0:22:57.19:0,57,844	0/0:44,0:44:81.07:0,81,1125	1/1:2,4:6:1.23:41,1,0	1/1:8,0:8:4.19:44,4,0	0/1:12,11:25:14.06:37,0,14	0/1:10,0:10:15.13:15,0,31	0/0:16,0:16:39.10:0,39,536	0/0:19,0:18:44.48:0,44,659	0/0:7,0:6:12.91:0,13,156
chr10	73026558	.	T	TG	166.11	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.472;DP=528;FS=10.965;HRun=2;HaplotypeScore=67.5163;InbreedingCoeff=0.7919;MQ=71.70;MQ0=3;MQRankSum=-2.195;QD=18.46;ReadPosRankSum=0.239;VQSLOD=2.4900;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:42.90:0,43,405	0/0:7,0:7:18.01:0,18,184	0/0:28,0:22:1.47:0,1,185	0/0:21,0:16:14.78:0,15,172	0/0:17,0:16:38.68:0,39,397	0/0:11,0:11:26.74:0,27,250	0/0:16,0:16:24.64:0,25,305	0/0:27,0:27:60:0,60,603	0/0:14,0:14:42.03:0,42,419	0/0:20,0:20:42.77:0,43,358	0/0:20,0:20:39.25:0,39,317	0/0:19,0:19:42.30:0,42,398	0/0:14,0:14:35.94:0,36,331	0/0:12,0:12:32.95:0,33,302	0/0:20,0:20:50.31:0,50,517	0/0:14,0:14:39.06:0,39,406	0/0:36,0:36:35.01:0,35,371	1/1:1,8:9:19.62:257,20,0	0/0:23,0:23:51.12:0,51,514	0/0:18,0:18:44.78:0,45,465	0/0:18,0:18:42.04:0,42,429	0/0:20,0:20:45.42:0,45,392	0/0:19,0:19:48.52:0,49,504	0/0:19,0:19:39.37:0,39,445	0/0:19,0:19:20.69:0,21,161	0/0:20,0:20:47.96:0,48,418	0/0:20,0:20:45.49:0,45,449	0/0:12,0:12:33.90:0,34,340
chr10	73026560	.	G	GA	1090.21	PASS	AB=0.854;AC=19;AF=0.339;AN=56;BaseQRankSum=-3.181;DP=567;FS=2.898;HRun=15;HaplotypeScore=74.2625;InbreedingCoeff=-0.3078;MQ=70.96;MQ0=3;MQRankSum=0.022;QD=2.82;ReadPosRankSum=-1.289;VQSLOD=-0.2195;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,17:37:68.63:241,0,69	0/0:6,0:7:12.76:0,13,62	0/1:30,1:22:8.80:9,0,27	0/0:21,0:16:5.18:0,5,39	0/1:16,3:18:21.01:21,0,113	0/1:11,2:13:7.64:8,0,71	0/1:11,3:14:46.04:46,0,96	0/0:26,0:28:23:0,23,195	0/0:19,0:20:22.19:0,22,131	0/1:16,5:22:5.08:85,0,5	1/1:17,4:21:2.76:114,3,0	0/1:16,3:19:29.85:30,0,69	0/0:16,0:16:11.50:0,12,72	0/0:15,0:16:13.26:0,13,76	0/0:17,1:19:3.18:0,3,124	0/0:15,0:15:23.34:0,23,143	0/1:14,21:37:37.14:280,0,37	0/1:11,0:11:11.42:84,0,11	0/1:22,2:25:8.46:8,0,165	0/1:16,1:18:7.87:8,0,159	0/0:17,0:18:5.95:0,6,126	0/1:16,1:21:42.29:42,0,44	0/0:17,0:20:11.46:0,11,154	0/1:18,4:22:12.18:12,0,159	0/1:8,11:21:1.72:148,0,2	0/1:15,6:22:37.47:90,0,37	0/1:16,1:21:13.79:14,0,120	0/1:11,0:12:0.18:0,0,89
chr10	73028553	.	A	AGT	7284.85	PASS	AB=0.654;AC=20;AF=0.357;AN=56;BaseQRankSum=1.210;DP=1188;FS=2.137;HRun=0;HaplotypeScore=226.6283;InbreedingCoeff=0.7098;MQ=56.81;MQ0=15;MQRankSum=-1.374;QD=18.73;ReadPosRankSum=-1.863;VQSLOD=4.7240;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:13,33:47:84.96:1801,85,0	0/1:13,1:14:12.58:13,0,353	0/0:73,0:26:41.93:0,42,463	0/0:78,0:39:33.57:0,34,535	0/0:26,0:26:69.20:0,69,830	0/0:28,0:29:68.95:0,69,818	0/0:53,0:54:99:0,123,1480	0/0:54,0:55:99:0,117,1361	0/0:39,0:39:82.11:0,82,977	0/1:19,32:50:12.70:1665,0,13	0/1:2,17:19:1.11:499,0,1	1/1:16,0:52:49.60:414,50,0	1/1:10,0:39:62.49:492,62,0	0/0:55,0:56:99:0,144,1695	0/0:64,0:65:99:0,162,1944	0/0:34,0:34:86.94:0,87,1037	1/1:13,15:28:5.68:729,6,0	1/1:5,14:19:2.50:547,3,0	0/0:19,0:18:42.10:0,42,481	0/0:24,0:25:69.05:0,69,820	0/0:150,1:155:99:0,357,4254	1/1:9,1:32:9.12:111,9,0	0/1:2,0:13:1.43:28,0,1	1/1:12,0:48:16.83:117,17,0	1/1:8,18:26:57.11:870,57,0	0/0:48,0:48:99:0,114,1374	0/0:26,0:27:50.88:0,51,586	0/0:14,0:14:36.11:0,36,440
chr10	73028598	.	A	ATG	1378.73	PASS	AB=1.000;AC=11;AF=0.212;AN=52;BaseQRankSum=6.794;DP=929;FS=4.038;HRun=0;HaplotypeScore=160.9707;InbreedingCoeff=0.5476;MQ=50.48;MQ0=79;MQRankSum=-3.178;QD=10.37;ReadPosRankSum=-0.426;VQSLOD=3.2270;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:11.22:0,11,603	0/0:16,0:16:36.11:0,36,458	./.	./.	0/0:19,0:19:51.15:0,51,636	0/0:32,0:32:69.22:0,69,878	0/0:49,0:45:99:0,114,1435	0/0:51,0:29:60.17:0,60,748	0/0:37,0:37:79.04:0,79,944	1/1:8,19:25:54.17:877,54,0	1/1:6,8:14:5.50:100,5,0	0/1:24,0:24:30.97:31,0,150	0/1:22,0:22:21.89:22,0,232	0/0:54,0:54:99:0,135,1687	0/0:40,0:40:96.26:0,96,1179	0/0:36,0:36:90.29:0,90,1145	1/1:6,7:13:16.40:247,16,0	0/0:9,0:9:5.30:0,5,24	0/0:30,0:20:42.13:0,42,534	0/0:27,0:28:65.70:0,66,810	0/0:138,0:134:99:0,322,4024	0/1:20,0:19:12.92:13,0,103	0/0:9,0:8:1.14:0,1,3	0/0:27,0:27:2.87:0,3,71	1/1:6,7:13:15.05:248,15,0	0/0:50,0:48:99:0,129,1603	0/0:24,0:24:72.21:0,72,891	0/0:17,0:17:36.11:0,36,458
chr10	73028638	.	A	ATG	2505.68	PASS	AB=0.667;AC=9;AF=0.167;AN=54;BaseQRankSum=-1.196;DP=851;FS=3.275;HRun=0;HaplotypeScore=112.6248;InbreedingCoeff=0.8056;MQ=53.66;MQ0=90;MQRankSum=0.266;QD=32.12;ReadPosRankSum=-4.539;VQSLOD=4.4226;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:80.95:0,81,965	0/0:12,0:12:33.11:0,33,419	./.	0/0:43,0:1:0.89:0,1,2	0/0:21,0:20:51.15:0,51,635	0/0:26,0:26:59.27:0,59,830	0/0:39,0:37:93.28:0,93,1166	0/0:41,0:29:38.94:0,39,459	0/0:36,0:36:87.28:0,87,1106	1/1:11,21:28:75.24:1210,75,0	0/1:4,4:8:23.14:186,0,23	0/0:29,0:28:57.64:0,58,712	0/0:21,0:21:48.15:0,48,611	0/0:48,0:48:99:0,126,1589	0/0:29,0:29:72.20:0,72,885	0/0:33,0:32:87.25:0,87,1080	1/1:4,7:11:24.08:401,24,0	1/1:8,0:8:5.99:49,6,0	0/0:28,0:18:48.15:0,48,611	0/0:20,0:20:48.14:0,48,597	0/0:121,0:115:99:0,241,2970	0/0:21,0:20:51.16:0,51,647	0/0:9,0:9:24.08:0,24,305	0/0:27,0:27:34.94:0,35,410	1/1:5,14:19:51.16:816,51,0	0/0:39,0:39:99:0,105,1325	0/0:32,0:32:84.23:0,84,1050	0/0:13,0:13:27.09:0,27,344
chr10	73028717	.	AGTGT	A	1202.07	PASS	AB=0.962;AC=10;AF=0.179;AN=56;BaseQRankSum=11.208;DP=870;FS=2.141;HRun=0;HaplotypeScore=206.8859;InbreedingCoeff=0.0456;MQ=54.93;MQ0=3;MQRankSum=-1.945;QD=4.79;ReadPosRankSum=-4.756;VQSLOD=1.7758;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:29:20.76:116,0,21	0/0:8,0:8:18.05:0,18,393	0/0:39,0:17:35.97:0,36,573	0/0:41,0:22:59.76:0,60,938	0/0:29,0:29:81.26:0,81,1668	0/0:22,0:22:57.16:0,57,1224	0/0:28,0:28:78.24:0,78,1525	0/0:41,0:39:90.23:0,90,1549	0/0:35,0:35:93.27:0,93,1983	0/1:43,2:45:16.69:416,0,17	0/1:20,1:21:36.14:140,0,36	0/1:23,1:24:19.08:61,0,19	0/1:27,1:28:46.41:123,0,46	0/0:48,0:48:99:0,123,2310	0/0:35,0:35:99:0,102,2260	0/0:31,0:31:81.26:0,81,1667	0/1:14,1:15:14.99:19,0,15	0/0:22,0:22:55.92:0,56,727	0/0:23,0:23:60.16:0,60,1048	0/0:20,0:20:48.16:0,48,995	0/0:79,0:77:99:0,168,3385	0/1:22,1:23:23.17:23,0,133	0/1:27,1:28:12.88:34,0,13	0/0:41,0:41:10.34:0,10,84	1/1:37,0:37:30.41:420,30,0	0/0:33,0:33:81.26:0,81,1557	0/0:26,0:26:65.61:0,66,1312	0/0:17,0:17:47.40:0,47,891
chr10	73028726	.	ATG	A	2604.52	PASS	AB=0.888;AC=25;AF=0.481;AN=52;BaseQRankSum=11.150;DP=845;FS=5.123;HRun=0;HaplotypeScore=168.2542;InbreedingCoeff=-0.0576;MQ=54.09;MQ0=10;MQRankSum=-3.373;QD=4.37;ReadPosRankSum=0.790;VQSLOD=2.4905;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,1:30:7.57:50,0,8	0/1:8,1:8:44.29:44,0,202	./.	./.	0/0:30,0:30:28.77:0,29,628	0/0:23,0:23:38.33:0,38,525	0/1:27,2:29:16.28:16,0,549	0/1:39,0:35:16.05:53,0,16	0/0:34,0:35:46.63:0,47,662	1/1:30,1:46:15.37:272,15,0	0/1:15,2:22:24.13:56,0,24	1/1:9,13:22:26.86:279,27,0	1/1:16,14:30:14.49:289,14,0	0/0:37,1:42:22.96:0,23,552	0/0:35,0:35:69.22:0,69,1023	0/1:25,2:27:29.69:30,0,409	0/1:14,0:16:10.53:32,0,11	0/1:18,0:21:14.17:14,0,27	0/1:21,1:20:7.18:7,0,274	0/1:20,1:21:34.76:35,0,295	0/1:71,4:71:99:143,0,656	0/1:14,7:22:40.12:236,0,40	0/1:14,16:30:0.12:300,0,0	1/1:25,12:37:55.25:628,55,0	1/1:19,2:36:48.78:272,49,0	0/1:33,2:35:15.14:15,0,501	0/1:26,0:26:2.49:2,0,324	0/0:16,0:16:15.51:0,16,203
chr10	73028801	.	G	GT	2365.44	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.652;DP=698;FS=11.673;HRun=8;HaplotypeScore=119.2776;InbreedingCoeff=0.9947;MQ=87.24;MQ0=2;MQRankSum=-2.276;QD=23.19;ReadPosRankSum=0.436;VQSLOD=2.4257;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:99:0,105,941	0/0:8,0:8:14.87:0,15,137	0/0:32,0:31:71:0,71,619	0/0:31,0:30:36.92:0,37,395	0/0:18,0:18:42.01:0,42,384	0/0:19,0:19:51.01:0,51,462	0/0:20,0:20:27.48:0,27,416	0/0:38,0:38:99:0,108,973	0/0:27,0:27:66.02:0,66,604	1/1:3,25:29:78.23:896,78,0	1/1:5,14:19:39.50:422,40,0	0/0:27,0:27:72.03:0,72,658	0/0:26,0:26:56.96:0,57,513	0/0:24,0:23:54.02:0,54,494	0/0:24,0:24:60.02:0,60,549	0/0:18,0:18:48.02:0,48,439	1/1:3,19:22:32.71:628,33,0	0/0:21,0:21:53.97:0,54,485	0/0:20,0:20:47.99:0,48,429	0/0:23,0:23:69.04:0,69,631	0/0:31,0:31:84.03:0,84,763	0/0:26,1:27:43.41:0,43,644	0/0:26,0:26:59.76:0,60,545	0/0:25,1:26:40.40:0,40,619	1/1:9,23:32:51.15:581,51,0	0/0:34,0:34:87.03:0,87,791	0/0:24,1:24:31.57:0,32,529	0/0:9,0:10:29.05:0,29,253
chr10	73030364	.	G	GGACCTGCCCCACTGGTGTCGCCCAT	7340.88	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-6.305;DP=675;FS=5.378;HRun=0;HaplotypeScore=355.9748;InbreedingCoeff=0.9472;MQ=84.57;MQ0=0;MQRankSum=-6.841;QD=53.98;ReadPosRankSum=-0.185;VQSLOD=2.4560;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,141,7377	0/0:9,0:9:24.05:0,24,1226	0/0:22,0:22:50.31:0,50,1942	0/0:29,0:30:68.30:0,68,2053	0/0:29,0:29:84.23:0,84,4942	0/0:22,0:22:66.18:0,66,3429	0/0:19,0:19:51.17:0,51,2682	0/0:29,0:28:75.18:0,75,3193	0/0:20,0:20:56.85:0,57,3338	0/0:18,0:18:54.19:0,54,3392	0/0:12,0:12:30.09:0,30,1646	1/1:5,7:36:24.55:2794,25,0	1/1:1,5:29:15.05:1752,15,0	0/0:33,0:33:87.24:0,87,4379	0/0:22,0:22:66.22:0,66,4087	0/0:28,0:28:81.22:0,81,4190	0/0:16,0:16:42.10:0,42,2171	0/0:18,0:18:51.06:0,51,2272	0/0:16,0:16:45.11:0,45,2249	0/0:23,0:23:63.11:0,63,3012	0/0:39,0:39:99:0,108,5194	1/1:1,3:21:8.75:1049,9,0	1/1:1,2:31:7.54:1043,8,0	1/1:3,5:19:8.98:703,9,0	0/0:20,0:20:60.09:0,60,2839	0/0:31,0:31:89.99:0,90,4607	0/0:23,0:23:60.15:0,60,3015	0/0:10,0:10:30.09:0,30,1841
chr10	73030762	.	CT	C	1793.30	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.319;DP=777;FS=22.932;HRun=1;HaplotypeScore=76.5177;InbreedingCoeff=0.9960;MQ=88.67;MQ0=0;MQRankSum=-3.523;QD=36.60;ReadPosRankSum=1.741;VQSLOD=1.8578;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,49:49:99:1888,135,0	0/0:8,0:8:21.07:0,21,336	0/0:26,0:26:75.02:0,75,1105	0/0:30,0:30:84.22:0,84,1249	0/0:45,0:45:99:0,135,2122	0/0:37,0:37:99:0,111,1745	0/0:26,0:26:78.25:0,78,1222	0/0:27,0:27:75.26:0,75,1192	0/0:30,0:30:87.28:0,87,1368	0/0:33,0:33:99:0,99,1584	0/0:20,0:20:51.17:0,51,806	0/0:25,0:25:75.26:0,75,1197	0/0:24,0:24:72.24:0,72,1140	0/0:19,0:19:57.19:0,57,911	0/0:33,0:33:99:0,99,1556	0/0:21,0:21:63.21:0,63,1007	0/0:26,0:26:78.23:0,78,1194	0/0:25,0:25:75.26:0,75,1194	0/0:19,0:19:57.17:0,57,868	0/0:27,0:27:81.26:0,81,1270	0/0:39,0:39:99:0,117,1820	0/0:29,0:29:87.28:0,87,1368	0/0:27,0:27:69.24:0,69,1100	0/0:31,0:31:93.30:0,93,1461	0/0:25,0:25:75.26:0,75,1199	0/0:32,0:32:93.32:0,93,1488	0/0:30,0:30:87.28:0,87,1367	0/0:14,0:14:42.14:0,42,671
chr10	73031837	.	CCCCACGCCCGCGCCCACGCCCACG	C	4174.23	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=5.942;DP=450;FS=1.771;HRun=0;HaplotypeScore=257.2430;InbreedingCoeff=0.6869;MQ=77.59;MQ0=2;MQRankSum=-6.205;QD=36.62;ReadPosRankSum=3.189;VQSLOD=2.1899;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:21.07:0,21,1159	0/0:3,0:3:3.01:0,3,154	0/1:21,0:19:23.80:24,0,488	0/0:16,0:16:24.06:0,24,747	0/0:5,0:5:3.01:0,3,333	0/0:14,0:14:33.07:0,33,2344	0/0:42,0:42:99:0,108,8555	0/0:3,0:3:6.02:0,6,413	0/0:10,0:10:27.09:0,27,2532	0/0:18,0:18:33.08:0,33,1522	0/0:9,0:9:9.03:0,9,298	1/1:10,12:22:21.07:1321,21,0	1/1:7,13:20:24.08:1511,24,0	0/0:22,0:22:48.16:0,48,4676	0/0:8,0:8:18.06:0,18,1276	0/0:7,0:7:15.05:0,15,1644	0/0:34,0:34:30.10:0,30,1713	0/0:21,0:21:48:0,48,3094	0/0:12,0:12:27.08:0,27,1924	./.	0/0:43,0:43:81.28:0,81,7498	1/1:7,2:9:3.01:189,3,0	1/1:6,0:6:3.01:154,3,0	1/1:17,19:36:15.96:975,16,0	0/0:10,0:10:15.05:0,15,890	0/0:16,0:16:27.08:0,27,2534	0/0:8,0:8:18.06:0,18,1597	0/0:5,0:5:15.05:0,15,1407
chr10	73031847	.	GCGCCCA	G	2419.04	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=9.098;DP=422;FS=2.799;HRun=0;HaplotypeScore=104.2222;InbreedingCoeff=0.8076;MQ=71.49;MQ0=3;MQRankSum=-9.281;QD=14.93;ReadPosRankSum=3.708;VQSLOD=2.1869;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,17:23:21.07:418,21,0	0/0:4,0:4:5.99:0,6,53	0/0:18,0:16:14.47:0,14,114	0/0:12,0:11:14.98:0,15,143	0/0:4,0:4:3.01:0,3,100	0/0:14,0:14:27.06:0,27,674	0/0:42,0:42:99:0,108,2352	0/0:2,0:2:3.01:0,3,100	0/0:10,0:10:27.08:0,27,722	1/1:4,10:14:24.07:443,24,0	1/1:3,4:6:3.01:64,3,0	1/1:18,0:18:21.07:294,21,0	1/1:16,0:16:24.08:335,24,0	0/0:24,0:24:60.19:0,60,1691	0/0:8,0:8:12.04:0,12,370	0/0:9,0:9:24.08:0,24,690	1/1:6,27:33:27.09:553,27,0	0/0:22,0:22:20.05:0,20,719	0/0:12,0:12:27.06:0,27,575	0/0:2,0:2:3.01:0,3,50	0/0:48,0:48:99:0,114,2910	1/1:6,0:6:3.01:42,3,0	1/1:4,0:4:2.37:8,2,0	1/1:33,0:33:14.55:178,15,0	1/1:2,6:8:15.05:281,15,0	0/0:17,0:17:30.10:0,30,827	0/0:6,0:6:15.05:0,15,501	0/0:6,0:6:18.04:0,18,467
chr10	73033096	.	TCA	T	5951.27	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.506;DP=704;FS=10.785;HRun=0;HaplotypeScore=86.9047;InbreedingCoeff=0.9968;MQ=80.29;MQ0=0;MQRankSum=-2.405;QD=39.41;ReadPosRankSum=1.407;VQSLOD=6.6005;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,40:44:99:1765,120,0	0/0:11,0:11:30.10:0,30,561	0/0:21,0:21:56.40:0,56,1000	0/0:20,0:20:51.15:0,51,890	0/0:18,0:18:54.16:0,54,978	0/0:15,0:15:39.13:0,39,730	0/0:28,0:28:81.28:0,81,1516	0/0:35,0:35:99:0,99,1836	0/0:25,0:25:75.24:0,75,1360	1/1:2,34:36:99:1494,102,0	1/1:5,13:18:45.15:662,45,0	0/0:22,0:22:60.19:0,60,1089	0/0:20,0:20:57.20:0,57,1068	0/0:25,0:25:69.24:0,69,1285	0/0:33,0:33:99:0,99,1833	0/0:22,0:22:60.21:0,60,1109	1/1:0,41:41:99:1546,105,0	0/0:27,0:27:78.22:0,78,1414	0/0:22,0:22:66.22:0,66,1202	0/0:13,0:13:39.13:0,39,730	0/0:57,0:57:99:0,163,2967	0/0:17,0:17:51.17:0,51,955	0/0:14,0:14:42.14:0,42,774	0/0:32,0:32:96.29:0,96,1733	1/1:1,11:12:33.11:484,33,0	0/0:19,1:20:16.01:0,16,1018	0/0:38,0:38:99:0,114,2077	0/0:18,0:18:54.18:0,54,984
chr10	73033191	.	A	AT	9435.81	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-12.732;DP=649;FS=32.381;HRun=1;HaplotypeScore=70.6467;InbreedingCoeff=0.9968;MQ=86.35;MQ0=1;MQRankSum=-8.523;QD=39.65;ReadPosRankSum=3.485;VQSLOD=2.6959;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,51:51:99:2114,142,0	0/0:8,0:8:24.08:0,24,311	0/0:26,0:26:78.25:0,78,1003	0/0:31,0:31:90.22:0,90,1112	0/0:19,0:19:54.16:0,54,687	0/0:17,0:17:45.04:0,45,583	0/0:30,0:30:78.15:0,78,997	0/0:33,0:33:69.21:0,69,882	0/0:24,0:24:69.21:0,69,872	1/1:3,28:31:81.27:1195,81,0	1/1:3,15:18:42.10:604,42,0	1/1:2,16:18:45.11:650,45,0	1/1:1,25:27:72.20:1051,72,0	0/0:16,0:16:39.60:0,40,507	0/0:29,0:29:87.28:0,87,1129	0/0:16,0:16:45.13:0,45,566	1/1:2,28:30:90.26:1305,90,0	0/0:28,0:28:81.26:0,81,1049	0/0:19,0:19:54.12:0,54,676	0/0:16,0:16:42.61:0,43,543	0/0:47,0:46:99:0,123,1563	1/1:2,8:10:27.09:403,27,0	1/1:0,9:9:24.08:360,24,0	1/1:2,29:31:81.27:1214,81,0	1/1:1,12:13:36.12:540,36,0	0/0:25,0:25:54.17:0,54,688	0/0:22,0:21:66.20:0,66,841	0/0:5,0:5:15.04:0,15,181
chr10	73037145	.	T	TTAAATAAA	2663.68	PASS	AC=18;AF=0.391;AN=46;BaseQRankSum=0.414;DP=378;FS=1.668;HRun=0;HaplotypeScore=93.6611;InbreedingCoeff=0.7691;MQ=61.97;MQ0=1;MQRankSum=-5.666;QD=20.03;ReadPosRankSum=-4.651;VQSLOD=0.9281;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:9:6.02:191,6,0	0/0:11,0:11:3.01:0,3,75	./.	./.	0/0:20,0:20:21.07:0,21,511	0/0:16,0:16:33.11:0,33,799	0/0:8,0:8:3.01:0,3,58	1/1:36,0:32:21.04:286,21,0	0/0:9,0:9:3.01:0,3,75	1/1:7,2:9:9.03:250,9,0	1/1:12,2:14:9.03:346,9,0	1/1:3,0:8:11.98:98,12,0	1/1:2,0:2:3.01:97,3,0	0/0:7,0:7:12.04:0,12,301	0/0:14,0:14:9.02:0,9,151	0/0:11,0:11:12.04:0,12,302	1/1:17,6:25:18.53:635,19,0	1/1:10,3:16:7.84:251,8,0	0/0:17,0:17:21.07:0,21,480	0/0:19,0:19:12.03:0,12,250	0/0:11,0:11:6.02:0,6,151	./.	./.	./.	1/1:7,6:14:18.06:683,18,0	0/0:13,0:13:12.04:0,12,302	0/0:22,0:22:36.11:0,36,819	0/0:18,0:18:45.14:0,45,1042
chr10	73037314	.	TTC	T	153.64	PASS	AB=0.977;AC=14;AF=0.318;AN=44;BaseQRankSum=1.867;DP=454;FS=16.220;HRun=0;HaplotypeScore=75.7193;InbreedingCoeff=0.3695;MQ=64.94;MQ0=15;MQRankSum=-0.046;QD=1.26;ReadPosRankSum=1.989;VQSLOD=0.3333;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:28:14.51:110,15,0	1/1:6,0:6:2.99:24,3,0	./.	./.	./.	0/1:18,2:20:3.98:4,0,36	0/0:19,0:19:2.92:0,3,17	0/0:30,0:30:1.25:0,1,3	0/0:9,0:9:3.01:0,3,38	0/0:9,0:9:3.88:0,4,26	./.	./.	1/1:5,0:8:5.74:30,6,0	0/0:12,0:12:6.86:0,7,55	0/0:15,0:12:4.26:0,4,44	0/1:4,0:5:3.06:3,0,19	0/0:37,0:37:34.63:0,35,256	1/1:8,8:16:9.02:95,9,0	0/0:19,0:18:9.03:0,9,116	0/0:20,0:20:0.47:0,0,1	0/0:20,0:19:2.57:0,3,13	./.	1/1:8,0:10:2.04:6,2,0	0/1:10,0:10:0:0,0,0	0/0:9,0:9:2.97:0,3,20	0/1:16,0:16:5.77:6,0,133	0/0:15,0:15:18.49:0,18,183	0/0:16,0:15:15.05:0,15,182
chr10	73037747	.	CG	C	4235.24	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.730;DP=610;FS=7.239;HRun=1;HaplotypeScore=71.6279;InbreedingCoeff=0.9981;MQ=77.76;MQ0=2;MQRankSum=-1.198;QD=39.58;ReadPosRankSum=2.845;VQSLOD=5.5220;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,1977	0/0:7,0:7:21.07:0,21,335	0/0:25,0:24:69.21:0,69,1047	0/0:26,0:20:47.28:0,47,723	0/0:28,0:28:81.28:0,81,1285	0/0:24,0:24:69.24:0,69,1098	0/0:20,0:20:60.17:0,60,927	0/0:36,0:36:99:0,105,1646	0/0:20,0:20:57.18:0,57,886	0/0:20,0:20:57.19:0,57,911	0/0:16,0:16:48.13:0,48,733	1/1:0,28:28:81.27:1132,81,0	1/1:0,15:15:39.13:545,39,0	0/0:21,0:21:60.18:0,60,933	0/0:18,0:18:54.18:0,54,863	0/0:20,0:20:60.16:0,60,930	0/0:24,0:24:72.24:0,72,1131	0/0:14,0:14:42.14:0,42,659	0/0:19,0:19:57.16:0,57,840	0/0:18,0:18:51.17:0,51,811	0/0:34,0:34:96.31:0,96,1495	1/1:0,19:19:54.18:754,54,0	1/1:0,21:21:60.20:839,60,0	1/1:0,24:24:69.23:965,69,0	0/0:13,0:13:39.13:0,39,615	0/0:23,0:23:69.19:0,69,1075	0/0:26,0:26:78.27:0,78,1238	0/0:7,0:7:21.07:0,21,327
chr10	73038315	.	GA	G	220.43	PASS	AB=0.950;AC=3;AF=0.054;AN=56;BaseQRankSum=5.843;DP=707;FS=0.630;HRun=12;HaplotypeScore=77.8087;InbreedingCoeff=0.4885;MQ=76.82;MQ0=0;MQRankSum=-0.361;QD=5.51;ReadPosRankSum=-0.040;VQSLOD=2.0026;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:58:99:0,132,1299	0/0:9,0:9:21.04:0,21,213	0/0:27,0:23:29.59:0,30,227	0/1:18,1:17:41.60:42,0,84	0/0:18,0:18:45.09:0,45,454	0/0:22,0:23:53.94:0,54,532	0/0:27,3:31:10.99:0,11,479	0/0:30,3:33:11.43:0,11,638	0/0:18,2:21:10.38:0,10,415	0/0:33,0:33:71.85:0,72,669	0/0:21,1:28:19.71:0,20,444	0/0:19,0:23:56.93:0,57,551	0/0:14,2:16:3.74:0,4,194	0/0:13,1:15:4.52:0,5,266	0/0:19,2:22:24.59:0,25,403	0/0:17,0:17:42.05:0,42,405	0/0:28,1:29:51.86:0,52,690	1/1:4,16:21:37.89:284,38,0	0/0:21,2:24:18.57:0,19,481	0/0:21,0:22:41.91:0,42,404	0/0:44,1:46:87.77:0,88,989	0/0:23,0:23:54.09:0,54,542	0/0:31,0:31:74.50:0,74,728	0/0:36,0:36:95.84:0,96,910	0/0:21,0:21:45.07:0,45,442	0/0:30,0:33:83.66:0,84,795	0/0:15,0:16:32.86:0,33,298	0/0:12,0:12:33.02:0,33,324
chr10	73039131	.	A	AT	7404.71	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-13.175;DP=710;FS=3.741;HRun=4;HaplotypeScore=64.4766;InbreedingCoeff=0.9983;MQ=77.89;MQ0=0;MQRankSum=-4.734;QD=39.81;ReadPosRankSum=2.653;VQSLOD=4.0944;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,64:65:99:2563,172,0	0/0:7,0:7:21.07:0,21,273	0/0:23,0:23:58.16:0,58,794	0/0:19,0:19:41.11:0,41,669	0/0:21,0:21:63.19:0,63,803	0/0:22,0:22:63.20:0,63,818	0/0:33,0:33:93.30:0,93,1207	0/0:32,0:32:87.27:0,87,1116	0/0:21,0:21:63.20:0,63,818	1/1:0,20:20:60.20:892,60,0	1/1:0,19:19:54.18:802,54,0	0/0:22,0:22:63.19:0,63,802	0/0:20,0:20:60.19:0,60,777	0/0:21,0:21:60.19:0,60,778	0/0:23,0:23:69.22:0,69,896	0/0:18,0:18:54.18:0,54,701	1/1:0,40:40:99:1664,111,0	1/1:0,20:20:48.16:719,48,0	0/0:23,0:23:69.22:0,69,883	0/0:22,0:22:66.21:0,66,855	0/0:44,0:44:99:0,126,1618	0/0:29,0:29:87.28:0,87,1129	0/0:16,0:16:48.16:0,48,623	0/0:22,0:22:66.21:0,66,857	1/1:1,21:22:51.17:765,51,0	0/0:48,2:50:49.72:0,50,1620	0/0:28,0:28:84.27:0,84,1088	0/0:8,0:8:21.07:0,21,273
chr10	73040038	.	GCT	G	2907.15	PASS	AB=0.826;AC=33;AF=0.635;AN=52;BaseQRankSum=5.869;DP=657;FS=5.631;HRun=0;HaplotypeScore=94.2881;InbreedingCoeff=0.4240;MQ=64.94;MQ0=10;MQRankSum=-1.723;QD=6.17;ReadPosRankSum=1.661;VQSLOD=2.5496;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:42:32.95:0,33,318	1/1:3,8:11:12.03:133,12,0	./.	./.	1/1:18,9:27:23.90:246,24,0	0/1:8,9:18:21.45:170,0,21	1/1:13,8:22:17.88:180,18,0	1/1:27,0:26:6.01:66,6,0	1/1:12,10:22:29.78:292,30,0	0/1:25,2:27:0.09:0,0,362	0/0:14,0:14:14.72:0,15,190	0/0:16,0:16:32.89:0,33,438	0/0:17,0:17:30.08:0,30,415	1/1:11,19:30:29.81:308,30,0	1/1:13,8:23:20.72:194,21,0	1/1:7,10:17:26.90:298,27,0	0/0:29,0:29:45.06:0,45,604	0/0:7,0:10:12.02:0,12,135	1/1:16,2:19:8.86:79,9,0	1/1:13,9:22:17.88:178,18,0	1/1:26,3:33:26.23:203,26,0	0/1:24,4:28:84.58:85,0,423	0/1:24,5:30:38.36:38,0,267	0/1:29,5:35:38.33:38,0,455	0/1:17,4:21:9.10:9,0,272	0/1:18,7:24:20.81:198,0,21	1/1:15,4:22:35.59:332,36,0	1/1:6,1:8:5.85:47,6,0
chr10	73042383	.	CAGAGAGAGAGAGAGAGAGAGAGAGAG	C	1361.39	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.817;DP=555;FS=32.733;HRun=0;HaplotypeScore=302.0884;InbreedingCoeff=0.7803;MQ=68.55;MQ0=12;MQRankSum=-1.135;QD=12.72;ReadPosRankSum=-0.446;VQSLOD=1.1005;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:8.89:100,9,0	0/0:4,0:4:6.02:0,6,362	0/0:36,0:17:0.47:0,0,1	0/0:43,0:17:0.47:0,0,1	0/0:22,0:22:21.07:0,21,1700	0/0:17,0:17:18.06:0,18,1774	0/0:15,0:18:27.56:0,28,2100	0/0:33,0:32:32.14:0,32,2035	0/0:15,0:17:27.09:0,27,2134	1/1:29,5:33:11.65:399,12,0	1/1:7,2:9:6.02:403,6,0	0/0:11,0:13:24.08:0,24,1447	0/0:16,0:18:33.11:0,33,2271	0/0:15,0:17:27.08:0,27,1768	0/0:10,0:11:15.05:0,15,1277	0/0:11,0:11:15.86:0,16,1165	1/1:16,2:16:2.60:200,3,0	0/0:9,0:10:27.02:0,27,962	0/0:17,0:17:20.74:0,21,1423	0/0:17,0:17:22.84:0,23,1225	0/0:34,0:35:48.16:0,48,4482	0/0:19,0:19:30.10:0,30,1787	0/0:16,0:18:27.09:0,27,1584	0/0:24,0:24:40:0,40,2515	1/1:10,2:12:6.02:403,6,0	0/0:26,0:25:45.15:0,45,3913	0/0:14,0:14:30.10:0,30,2382	0/0:7,0:7:10.59:0,11,430
chr10	73043329	.	GAGCT	G	6011.19	PASS	AB=0.926;AC=13;AF=0.232;AN=56;BaseQRankSum=13.542;DP=733;FS=34.465;HRun=0;HaplotypeScore=118.5125;InbreedingCoeff=0.8990;MQ=73.83;MQ0=3;MQRankSum=-4.210;QD=37.57;ReadPosRankSum=5.743;VQSLOD=2.7118;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:35:93.32:1735,93,0	0/0:14,0:14:42.14:0,42,1109	0/0:32,0:32:87.30:0,87,2157	0/0:27,0:27:75.25:0,75,1845	0/0:28,0:28:81.28:0,81,2127	0/0:24,0:24:66.23:0,66,1760	0/0:36,0:36:99:0,105,2621	0/0:50,0:50:99:0,135,3561	0/0:42,0:42:99:0,126,3256	1/1:2,20:22:60.21:1117,60,0	1/1:1,12:12:27.09:504,27,0	0/0:26,0:26:66.23:0,66,1738	0/0:29,0:29:81.28:0,81,2116	0/0:30,0:30:87.27:0,87,2201	0/0:27,0:27:75.26:0,75,1923	0/0:29,0:29:81.28:0,81,2149	1/1:5,15:20:27.09:504,27,0	1/1:0,22:22:63.17:1140,63,0	0/0:22,0:22:51.17:0,51,1343	0/0:17,0:17:48.16:0,48,1274	0/0:42,0:42:99:0,108,2808	0/0:24,0:24:66.23:0,66,1751	0/0:17,0:17:51.18:0,51,1354	0/0:20,0:20:57.17:0,57,1462	1/1:0,21:20:54.14:971,54,0	0/1:23,2:25:39.72:40,0,1681	0/0:28,0:28:84.29:0,84,2194	0/0:9,0:9:24.08:0,24,640
chr10	73044093	.	ACTCTCT	A	136.98	PASS	AB=0.838;AC=10;AF=0.263;AN=38;BaseQRankSum=2.945;DP=369;FS=8.224;HRun=0;HaplotypeScore=78.4704;InbreedingCoeff=0.3842;MQ=74.48;MQ0=12;MQRankSum=0.330;QD=1.59;ReadPosRankSum=-0.409;VQSLOD=0.5151;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:4.51:0,5,85	0/0:7,0:7:2.86:0,3,20	./.	./.	./.	./.	0/0:15,0:14:12.04:0,12,383	0/0:27,0:27:2.51:0,3,7	0/0:13,0:13:6.02:0,6,193	1/1:10,0:10:1.25:3,1,0	./.	1/1:10,1:13:9.03:153,9,0	1/1:12,1:13:3.01:61,3,0	0/0:13,0:13:11.99:0,12,276	0/0:14,0:14:12:0,12,171	./.	0/0:18,0:19:19.21:0,19,256	0/0:12,0:12:2.55:0,3,47	1/1:15,0:15:2.79:17,3,0	0/0:6,0:5:0:0,0,0	0/0:21,0:21:2:0,2,12	0/0:5,2:7:0:0,0,0	./.	0/1:21,7:28:0:0,0,0	0/0:6,0:8:6.02:0,6,82	./.	0/1:6,0:6:7.62:8,0,35	./.
chr10	73044220	.	TTATATATATATATATATATATA	T	1753.03	PASS	AB=1.000;AC=13;AF=0.722;AN=18;BaseQRankSum=2.075;DP=126;FS=1.359;HRun=0;HaplotypeScore=73.9033;MQ=88.98;MQ0=3;MQRankSum=-3.261;QD=30.75;ReadPosRankSum=1.647;VQSLOD=1.2230;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:10:12.04:268,12,0	./.	0/1:9,0:7:0:0,0,0	./.	./.	./.	./.	./.	./.	1/1:4,5:9:15.52:529,16,0	1/1:5,1:6:9.03:176,9,0	1/1:5,0:5:3:28,3,0	./.	./.	./.	./.	1/1:9,1:10:15.02:453,15,0	0/0:14,0:14:30.10:0,30,1850	./.	./.	./.	./.	./.	./.	1/1:4,2:7:15.03:398,15,0	./.	./.	0/0:4,0:5:9.03:0,9,378
chr10	73044241	.	T	TGC	453.37	PASS	AB=0.833;AC=11;AF=0.500;AN=22;BaseQRankSum=3.145;DP=73;FS=0.000;HRun=0;HaplotypeScore=56.3274;InbreedingCoeff=0.4969;MQ=81.06;MQ0=6;MQRankSum=-2.051;QD=12.25;ReadPosRankSum=-1.535;VQSLOD=2.9230;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:5:3.46:12,3,0	./.	1/1:9,0:3:0.46:1,0,0	0/0:16,0:8:2.63:0,3,14	./.	./.	./.	0/0:3,0:2:3.01:0,3,48	./.	1/1:6,1:7:14.98:178,15,0	1/1:3,1:4:9.02:108,9,0	0/0:1,0:1:2.74:0,3,12	./.	./.	./.	./.	1/1:4,2:6:14.23:141,14,0	0/0:12,0:12:33.11:0,33,522	./.	./.	./.	./.	./.	./.	0/1:4,1:5:5.84:116,0,6	./.	./.	0/0:3,0:3:7.27:0,7,90
chr10	73044272	.	TTA	T	194.56	PASS	AB=0.794;AC=10;AF=0.714;AN=14;BaseQRankSum=0.566;DP=95;FS=0.000;HRun=0;HaplotypeScore=70.6466;MQ=85.71;MQ0=5;MQRankSum=0.453;QD=2.78;ReadPosRankSum=2.152;VQSLOD=1.1178;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:9.02:0,9,92	./.	./.	0/1:34,0:13:0:0,0,1	./.	./.	./.	1/1:5,0:5:2.84:14,3,0	./.	./.	1/1:3,1:4:3.01:33,3,0	./.	./.	./.	./.	./.	0/1:3,6:10:45.73:155,0,46	1/1:9,0:11:2.84:14,3,0	./.	./.	./.	./.	./.	./.	1/1:4,2:6:6.01:60,6,0	./.	./.	./.
chr10	73044838	.	C	CT	2046.59	PASS	AB=0.950;AC=14;AF=0.250;AN=56;BaseQRankSum=2.029;DP=410;FS=9.051;HRun=1;HaplotypeScore=65.0663;InbreedingCoeff=0.8868;MQ=64.50;MQ0=14;MQRankSum=-1.776;QD=15.50;ReadPosRankSum=3.303;VQSLOD=3.0069;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:28:26.67:359,27,0	0/0:9,0:9:27.07:0,27,338	0/0:23,0:13:38.46:0,38,398	0/0:23,0:11:18.13:0,18,352	0/0:17,0:16:33.03:0,33,457	0/0:11,0:10:27.08:0,27,353	0/0:19,0:17:35.84:0,36,481	0/0:19,0:19:50.16:0,50,612	0/0:14,0:14:29.89:0,30,350	1/1:2,14:16:33.16:469,33,0	1/1:1,10:10:21.07:277,21,0	0/0:14,0:13:24.93:0,25,295	0/0:7,0:7:12.03:0,12,144	0/0:10,0:8:20.83:0,21,227	0/0:17,0:15:39.13:0,39,528	0/0:12,0:11:24.06:0,24,322	1/1:3,14:17:30.09:444,30,0	1/1:2,13:15:24.03:340,24,0	0/0:12,0:12:29.87:0,30,371	0/0:10,0:10:24.08:0,24,331	0/0:9,0:8:18.02:0,18,239	0/0:14,0:14:36.10:0,36,464	0/0:16,0:16:39.02:0,39,450	0/1:3,0:3:0:0,0,0	1/1:2,21:24:24.01:339,24,0	0/1:16,2:17:3.55:4,0,464	0/0:12,0:10:24.06:0,24,312	0/0:9,0:9:21.07:0,21,283
chr10	73047532	.	G	GGAGA	1114.04	PASS	AB=0.957;AC=29;AF=0.558;AN=52;BaseQRankSum=0.087;DP=530;FS=33.191;HRun=0;HaplotypeScore=93.1788;InbreedingCoeff=0.3937;MQ=73.30;MQ0=18;MQRankSum=-1.052;QD=3.71;ReadPosRankSum=-0.704;VQSLOD=-0.3646;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:2.53:0,3,27	1/1:6,0:6:2.99:24,3,0	./.	0/1:51,0:15:0:0,0,0	0/0:10,0:11:6.01:0,6,69	0/1:18,0:18:10.15:29,0,10	0/0:22,0:22:7.21:0,7,72	1/1:19,0:18:1.25:3,1,0	0/0:15,0:23:17.94:0,18,156	1/1:21,0:21:10.18:84,10,0	1/1:7,0:7:6.01:74,6,0	0/1:13,3:18:24.36:64,0,24	1/1:6,7:14:3.01:64,3,0	0/0:18,0:20:17.82:0,18,230	0/0:21,0:21:8.94:0,9,131	0/0:11,0:14:9.02:0,9,120	1/1:17,1:19:5.06:247,5,0	1/1:15,0:15:12.03:209,12,0	1/1:15,0:15:1.82:5,2,0	0/0:11,0:10:3:0,3,25	0/1:31,0:30:18.92:19,0,20	./.	1/1:8,0:8:2.66:24,3,0	1/1:18,0:18:24.01:304,24,0	1/1:13,0:13:11.99:102,12,0	0/1:18,0:19:3.28:3,0,20	0/0:23,0:24:20.24:0,20,235	1/1:8,0:8:2.98:21,3,0
chr10	73048457	.	CGCGT	C	1495.97	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=7.259;DP=571;FS=0.670;HRun=0;HaplotypeScore=118.0653;InbreedingCoeff=0.8575;MQ=56.48;MQ0=14;MQRankSum=1.180;QD=16.62;ReadPosRankSum=0.591;VQSLOD=3.2237;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:9.29:0,9,90	0/0:10,0:10:27.09:0,27,646	./.	0/0:29,0:7:0.17:0,0,33	0/0:26,0:26:32.60:0,33,560	0/0:17,0:16:21.06:0,21,457	0/0:44,0:44:81.22:0,81,1725	0/0:18,0:18:15.47:0,15,239	0/0:17,0:17:33.07:0,33,722	0/0:24,0:23:12:0,12,197	0/0:13,0:13:9.15:0,9,94	1/1:9,12:21:30.10:471,30,0	1/1:5,8:13:21.06:337,21,0	0/0:15,0:14:21.05:0,21,456	0/0:10,0:9:6.02:0,6,144	0/0:17,0:17:30.05:0,30,597	0/0:21,0:21:13.79:0,14,175	0/0:17,0:17:11.95:0,12,162	0/0:25,0:25:30.02:0,30,531	0/0:13,0:13:17.93:0,18,375	0/0:44,0:44:87.22:0,87,1857	1/1:7,12:18:21.07:337,21,0	1/1:6,9:15:17.94:278,18,0	1/1:16,6:22:15.05:241,15,0	0/0:20,0:20:11.51:0,12,168	0/0:21,0:20:39:0,39,722	0/0:20,0:20:36.12:0,36,833	0/0:10,0:9:24.08:0,24,577
chr10	73048487	.	C	CGTGTGTGT	1246.82	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=2.092;DP=588;FS=8.897;HRun=0;HaplotypeScore=158.1803;InbreedingCoeff=0.7167;MQ=52.80;MQ0=16;MQRankSum=-2.721;QD=6.85;ReadPosRankSum=-2.170;VQSLOD=1.8308;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:20:5.81:120,6,0	0/0:16,0:16:45.15:0,45,974	0/1:21,0:2:9.27:12,0,9	0/1:32,0:10:0.40:0,0,185	0/0:22,0:22:36.09:0,36,635	0/0:16,0:15:30.10:0,30,589	0/0:51,0:52:99:0,126,2376	0/0:14,0:14:36.10:0,36,604	0/0:14,0:14:24.08:0,24,640	1/1:6,13:18:33.06:560,33,0	1/1:2,6:9:3.01:128,3,0	0/0:22,0:22:42.14:0,42,752	0/0:16,0:16:41.68:0,42,727	0/0:16,0:15:29.96:0,30,536	0/0:8,0:7:9.03:0,9,202	0/0:12,0:12:21.07:0,21,560	1/1:6,19:31:15.04:354,15,0	1/1:4,1:22:3.01:106,3,0	0/0:20,0:20:38.92:0,39,702	0/0:11,0:11:27.09:0,27,556	0/0:60,0:60:99:0,150,2891	0/0:14,0:13:27.05:0,27,513	0/0:16,0:16:33.09:0,33,545	0/0:22,0:22:48.16:0,48,824	1/1:9,13:26:2.93:127,3,0	0/0:22,0:22:47.78:0,48,863	0/0:21,0:21:54.07:0,54,1063	0/0:12,0:11:30.01:0,30,659
chr10	73049111	.	CT	C	1416.75	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.455;DP=292;FS=2.429;HRun=1;HaplotypeScore=30.2824;InbreedingCoeff=0.8892;MQ=79.51;MQ0=0;MQRankSum=-3.160;QD=33.73;ReadPosRankSum=0.459;VQSLOD=3.1248;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:30.10:419,30,0	0/0:2,0:2:6.02:0,6,96	0/0:5,0:4:12.04:0,12,191	0/0:10,0:10:24.05:0,24,344	0/0:7,0:7:21.07:0,21,335	0/0:12,0:12:36.11:0,36,552	0/0:28,0:28:84.27:0,84,1312	0/0:10,0:10:30.09:0,30,440	0/0:11,0:11:33.11:0,33,525	1/1:0,5:5:15.05:209,15,0	1/1:0,1:1:3.01:41,3,0	0/0:26,0:26:75.21:0,75,1120	0/0:11,0:11:33.11:0,33,526	0/0:12,0:12:36.12:0,36,568	0/0:18,0:18:54.18:0,54,861	0/0:16,0:16:48.13:0,48,717	1/1:0,15:15:45.15:628,45,0	1/1:0,5:5:9.03:126,9,0	0/0:13,0:13:39.13:0,39,623	0/0:6,0:6:18.06:0,18,287	0/0:14,0:14:42.06:0,42,593	0/0:8,0:8:21.07:0,21,335	0/0:8,0:8:24.08:0,24,383	0/0:7,0:7:21.07:0,21,336	1/1:0,4:4:12.04:167,12,0	0/0:12,0:12:33.11:0,33,527	0/0:12,0:12:36.12:0,36,574	0/0:2,0:2:6.02:0,6,96
chr10	73049403	.	AGC	A	242.21	PASS	AB=0.545;AC=7;AF=0.125;AN=56;BaseQRankSum=6.165;DP=364;FS=0.000;HRun=0;HaplotypeScore=67.9713;InbreedingCoeff=0.7752;MQ=84.03;MQ0=0;MQRankSum=-6.096;QD=10.53;ReadPosRankSum=2.044;VQSLOD=3.2345;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:23.39:0,23,479	0/0:6,0:6:15.05:0,15,291	0/0:15,0:15:39.12:0,39,758	0/0:12,0:12:31.84:0,32,612	0/0:3,0:3:9.03:0,9,183	0/0:5,0:5:15.05:0,15,288	0/0:25,0:25:75.21:0,75,1454	0/0:14,0:14:36.12:0,36,672	0/0:8,0:8:24.08:0,24,487	0/1:1,5:6:2.93:100,0,3	1/1:0,2:2:2.99:24,3,0	0/0:28,0:28:75.26:0,75,1511	0/0:11,0:11:33.11:0,33,629	0/0:17,0:17:51.15:0,51,951	0/0:7,0:7:21.07:0,21,423	0/0:9,0:9:27.09:0,27,546	1/1:2,8:10:10.15:157,10,0	0/0:28,0:28:81.27:0,81,1600	0/0:15,0:15:39.13:0,39,735	0/0:5,0:5:15.05:0,15,304	0/0:49,0:49:99:0,144,2709	0/0:8,0:8:21.03:0,21,366	0/0:8,0:8:21.07:0,21,411	0/0:29,0:29:84.25:0,84,1669	1/1:0,5:5:11.96:92,12,0	0/0:7,0:7:21.03:0,21,351	0/0:11,0:11:33.10:0,33,632	0/0:8,0:8:24.08:0,24,487
chr10	73049408	.	CAA	C	233.84	PASS	AB=0.573;AC=6;AF=0.107;AN=56;BaseQRankSum=6.262;DP=388;FS=0.000;HRun=2;HaplotypeScore=73.8445;InbreedingCoeff=0.5861;MQ=84.48;MQ0=0;MQRankSum=-6.727;QD=8.35;ReadPosRankSum=1.066;VQSLOD=0.4492;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:5.38:0,5,260	0/0:5,0:5:15.05:0,15,299	0/0:17,0:17:45.06:0,45,790	0/0:13,0:13:39.12:0,39,717	0/0:4,0:4:12.04:0,12,234	0/0:7,0:7:21.01:0,21,307	0/0:26,0:26:78.21:0,78,1507	0/0:15,0:15:39.13:0,39,792	0/0:9,0:9:27.09:0,27,531	0/1:1,5:6:8.70:98,0,9	1/1:1,2:3:5.93:41,6,0	0/0:28,0:28:78.20:0,78,1507	0/0:12,0:12:36.11:0,36,695	0/0:17,0:17:51.18:0,51,1033	0/0:7,0:7:21.07:0,21,427	0/0:11,0:11:33.09:0,33,567	0/1:4,8:12:7.68:111,0,8	0/0:29,0:29:81.15:0,81,852	0/0:15,0:15:42.13:0,42,783	0/0:5,0:5:15.05:0,15,282	0/0:52,0:52:99:0,150,2973	0/0:9,0:9:27.02:0,27,504	0/0:8,0:8:21.07:0,21,426	0/0:28,0:28:81.24:0,81,1628	1/1:2,5:7:14.90:110,15,0	0/0:8,0:8:24.05:0,24,415	0/0:11,0:11:33.11:0,33,670	0/0:9,0:9:27.06:0,27,507
chr10	73049421	.	T	TGC	824.32	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.227;DP=393;FS=1.638;HRun=0;HaplotypeScore=83.3952;InbreedingCoeff=0.8339;MQ=81.60;MQ0=0;MQRankSum=-6.625;QD=26.59;ReadPosRankSum=-2.795;VQSLOD=4.0260;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:25.39:0,25,182	0/0:4,0:4:8.94:0,9,67	0/0:16,0:18:3.18:0,3,430	0/0:13,0:13:26.45:0,26,272	0/0:4,0:4:11.36:0,11,112	0/0:11,0:11:30.09:0,30,397	0/0:28,0:28:75.21:0,75,985	0/0:16,0:16:32.99:0,33,348	0/0:9,0:9:21.05:0,21,259	1/1:4,3:7:14.27:174,14,0	1/1:1,2:3:5.38:60,5,0	0/0:29,0:29:71.96:0,72,628	0/0:14,0:13:32.97:0,33,292	0/0:18,0:18:53.67:0,54,664	0/0:7,0:7:21.05:0,21,263	0/0:9,0:9:24.06:0,24,303	1/1:4,11:15:38.84:557,39,0	0/0:28,0:28:75.16:0,75,944	0/0:12,0:12:33:0,33,356	0/0:2,0:2:3:0,3,26	0/0:49,0:49:99:0,120,1520	0/0:11,0:10:29.78:0,30,230	0/0:7,0:7:18:0,18,158	0/0:29,0:29:75.04:0,75,664	1/1:3,3:6:14.71:181,15,0	0/0:9,0:9:24.06:0,24,304	0/0:12,0:12:30.05:0,30,354	0/0:6,0:6:14.95:0,15,147
chr10	73049424	.	GC	G	1598.52	PASS	AB=0.909;AC=12;AF=0.222;AN=54;BaseQRankSum=5.315;DP=393;FS=11.192;HRun=10;HaplotypeScore=69.5463;InbreedingCoeff=0.7102;MQ=82.93;MQ0=0;MQRankSum=-3.957;QD=14.53;ReadPosRankSum=3.713;VQSLOD=2.8691;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:17:17.38:0,17,123	0/0:4,0:4:3:0,3,25	0/0:18,0:18:37.74:0,38,340	0/0:17,0:17:24.29:0,24,230	0/0:4,0:4:6.02:0,6,66	0/0:11,0:11:30.07:0,30,323	0/0:24,1:25:40.14:0,40,671	0/0:16,0:16:15.03:0,15,160	0/0:8,0:8:15.04:0,15,166	0/0:8,0:8:9.24:0,9,52	0/0:3,0:3:2.90:0,3,16	1/1:5,23:28:59.97:518,60,0	1/1:0,15:14:35.90:312,36,0	0/0:18,0:19:50.96:0,51,536	0/1:7,1:8:2:2,0,200	0/0:8,0:8:21.05:0,21,225	0/0:14,0:14:30.32:0,30,163	0/0:26,2:28:46.09:0,46,703	0/1:12,1:13:4.83:5,0,206	./.	0/0:48,0:48:82.43:0,82,1114	1/1:1,10:10:26.95:227,27,0	1/1:2,5:7:11.99:104,12,0	1/1:2,26:28:69.45:599,69,0	0/0:6,0:6:8.68:0,9,47	0/0:11,0:11:24.06:0,24,264	0/0:10,0:10:24.04:0,24,249	0/0:6,0:6:6.02:0,6,66
chr10	73049792	.	AC	A	738.84	PASS	AB=0.898;AC=13;AF=0.232;AN=56;BaseQRankSum=2.671;DP=519;FS=1.662;HRun=10;HaplotypeScore=77.4811;InbreedingCoeff=-0.0774;MQ=80.98;MQ0=1;MQRankSum=0.100;QD=3.36;ReadPosRankSum=0.790;VQSLOD=-0.2384;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:96.13:0,96,990	0/1:8,1:9:11.10:11,0,102	0/0:19,0:21:7.20:0,7,293	0/1:30,1:29:11.22:11,0,211	0/1:12,1:13:2:2,0,200	0/0:12,0:12:21.02:0,21,207	0/0:36,3:40:15.05:0,15,872	0/1:13,0:13:3.21:3,0,128	0/1:8,2:10:25.06:25,0,187	0/0:8,0:8:19.59:0,20,90	0/0:13,0:14:10.27:0,10,74	0/0:15,0:15:33.09:0,33,365	0/0:16,0:16:8.92:0,9,244	0/1:16,1:17:14.08:14,0,310	0/1:16,2:17:10:10,0,348	0/0:15,0:15:33.52:0,34,351	0/0:33,0:33:72.79:0,73,334	1/1:3,28:31:77.98:677,78,0	0/0:13,0:14:20.87:0,21,204	0/1:6,3:9:34.57:35,0,102	0/1:22,4:26:54.31:54,0,344	0/0:9,0:9:21.04:0,21,222	0/0:10,0:10:26.97:0,27,243	0/1:26,3:29:7.01:7,0,607	0/0:16,0:17:25.22:0,25,117	0/0:22,1:23:19.06:0,19,429	0/1:12,2:14:38.31:38,0,232	0/0:3,0:3:9:0,9,88
chr10	73049799	.	C	CCCT	2935.95	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-5.961;DP=520;FS=4.186;HRun=0;HaplotypeScore=99.8762;InbreedingCoeff=0.9750;MQ=79.85;MQ0=1;MQRankSum=-4.261;QD=38.13;ReadPosRankSum=2.574;VQSLOD=4.7262;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,102,1349	0/0:8,0:8:18.04:0,18,237	0/0:20,0:20:43.87:0,44,585	0/0:28,0:25:49.99:0,50,503	0/0:14,0:14:27.03:0,27,355	0/0:9,0:9:21.04:0,21,286	0/0:37,0:37:99:0,103,1477	0/0:13,0:13:27.04:0,27,305	0/0:11,0:11:27.04:0,27,337	1/1:1,10:11:27.06:488,27,0	1/1:3,13:16:21.94:440,22,0	0/0:17,0:17:44.59:0,45,601	0/0:18,0:18:39.48:0,39,488	0/0:20,0:20:48.06:0,48,619	0/0:17,0:16:45.12:0,45,624	0/0:17,0:17:33.10:0,33,489	1/1:2,28:33:78.26:1616,78,0	0/0:31,0:31:84.04:0,84,743	0/0:15,0:15:32.69:0,33,363	0/0:10,0:10:17.72:0,18,213	0/0:33,0:33:70.47:0,70,799	0/0:9,0:9:27.04:0,27,355	0/0:9,0:9:24.91:0,25,271	0/0:30,0:30:84.20:0,84,1141	1/1:1,12:17:27.09:551,27,0	0/0:20,0:20:45.13:0,45,662	0/0:14,0:14:33.08:0,33,457	0/0:3,0:3:9.03:0,9,141
chr10	73052168	.	TACA	T	220.15	PASS	AB=0.805;AC=3;AF=0.054;AN=56;BaseQRankSum=3.026;DP=795;FS=16.251;HRun=0;HaplotypeScore=136.4058;InbreedingCoeff=-0.0696;MQ=57.40;MQ0=16;MQRankSum=-3.477;QD=2.86;ReadPosRankSum=-4.626;VQSLOD=-0.1179;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,5:40:55.50:0,55,1140	0/0:7,0:7:21.06:0,21,445	0/0:63,0:18:52.17:0,52,1007	0/0:69,0:28:46.38:0,46,1482	0/0:13,0:13:36.12:0,36,886	0/0:14,0:14:33.08:0,33,759	0/0:39,0:39:99:0,99,2339	0/0:27,0:27:77.79:0,78,1808	0/0:36,0:35:95.92:0,96,2182	0/1:20,7:26:99:288,0,1190	0/0:6,2:8:14.92:0,15,369	0/1:30,7:39:12.80:13,0,1467	0/0:19,7:25:1.39:0,1,1226	0/0:35,0:35:93.32:0,93,2157	0/0:30,0:30:84.12:0,84,1986	0/0:22,0:22:60.21:0,60,1427	0/0:21,1:21:6.60:0,7,183	0/0:32,0:32:26.92:0,27,487	0/0:15,0:15:40.95:0,41,901	0/0:5,0:5:15.05:0,15,366	0/0:91,0:90:99:0,220,5187	0/0:13,5:18:27.09:0,27,665	0/1:6,3:8:15.19:15,0,142	0/0:35,12:45:22.92:0,23,1757	0/0:12,4:15:23.69:0,24,564	0/0:20,0:20:16.09:0,16,1313	0/0:15,0:15:42.14:0,42,1005	0/0:6,0:6:18.06:0,18,443
chr10	73052176	.	G	GTGTA	2373.04	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=5.363;DP=873;FS=3.308;HRun=0;HaplotypeScore=158.8668;InbreedingCoeff=0.6200;MQ=53.74;MQ0=28;MQRankSum=-1.530;QD=8.54;ReadPosRankSum=3.038;VQSLOD=2.7042;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:41:31.22:597,31,0	0/0:5,0:5:14.77:0,15,206	0/0:71,0:18:39.33:0,39,330	0/0:84,0:25:62.32:0,62,562	0/0:15,0:15:44.94:0,45,478	0/0:14,0:14:30.42:0,30,295	0/0:38,0:38:92.91:0,93,1149	0/0:31,0:31:52.45:0,52,534	0/0:37,0:36:89.95:0,90,1048	1/1:32,0:31:56.68:693,57,0	1/1:10,0:10:15.01:173,15,0	0/1:38,0:37:84.81:85,0,270	0/1:23,0:22:14.32:14,0,174	0/0:38,0:38:93:0,93,1150	0/0:34,0:34:91.44:0,91,1146	0/0:24,0:24:57.53:0,58,751	0/1:21,0:20:18.13:133,0,18	1/1:1,36:39:24.08:644,24,0	0/0:17,0:17:46.01:0,46,385	0/0:5,0:5:11.88:0,12,128	0/0:117,0:116:99:0,240,2385	0/0:16,0:15:14.96:0,15,119	1/1:8,0:6:5.70:29,6,0	0/1:49,0:46:14.57:15,0,335	1/1:16,0:15:17.05:180,17,0	0/0:26,0:25:50.53:0,51,661	0/0:15,0:15:41.53:0,42,451	0/0:8,0:8:24.01:0,24,305
chr10	73052178	.	G	GTA	1230.58	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=6.038;DP=877;FS=11.050;HRun=0;HaplotypeScore=131.0797;InbreedingCoeff=0.6770;MQ=53.63;MQ0=28;MQRankSum=-1.095;QD=7.74;ReadPosRankSum=3.045;VQSLOD=3.0212;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,10:41:27.71:421,28,0	0/0:5,0:5:14.77:0,15,172	0/0:69,0:16:39.91:0,40,332	0/0:86,0:26:62.36:0,62,567	0/0:15,0:15:44.94:0,45,441	0/0:15,0:15:36.40:0,36,324	0/0:38,0:38:96.01:0,96,1020	0/0:27,0:27:71.56:0,72,603	0/0:36,0:35:89.83:0,90,929	0/1:32,0:31:98.46:338,0,98	1/1:10,0:10:15:135,15,0	0/0:38,0:37:43.87:0,44,361	0/0:22,0:21:5.46:0,5,209	0/0:38,0:38:95.89:0,96,1009	0/0:36,0:36:95.71:0,96,1009	0/0:24,0:24:40.04:0,40,637	0/1:21,0:20:18.30:96,0,18	1/1:39,0:39:8.10:258,8,0	0/0:17,0:17:50.41:0,50,398	0/0:5,0:5:11.88:0,12,117	0/0:122,0:121:99:0,241,2323	0/0:17,0:16:14.96:0,15,118	0/0:9,0:7:5.57:0,6,31	0/0:49,0:46:57.66:0,58,461	1/1:15,0:14:17.83:144,18,0	0/0:25,0:24:53.78:0,54,651	0/0:15,0:15:41.20:0,41,387	0/0:9,0:9:24.01:0,24,274
chr10	73052199	.	T	TGTGC	945.42	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=11.027;DP=843;FS=16.838;HRun=0;HaplotypeScore=155.5673;InbreedingCoeff=0.0594;MQ=54.70;MQ0=28;MQRankSum=-1.165;QD=4.24;ReadPosRankSum=3.449;VQSLOD=1.7949;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:42,6:49:57.68:635,58,0	0/0:5,0:5:15:0,15,215	0/0:73,0:26:23.04:0,23,447	0/0:79,0:20:5.51:0,6,426	0/0:12,0:12:36:0,36,415	0/0:15,0:15:38.96:0,39,375	0/0:38,0:38:87.54:0,88,1098	0/0:27,0:27:67.76:0,68,614	0/0:31,0:30:78.04:0,78,963	0/1:29,0:28:80.57:81,0,243	0/0:11,0:11:0.82:0,1,68	0/1:31,0:30:83.32:83,0,141	0/0:19,0:18:4.76:0,5,133	0/0:35,0:35:89.95:0,90,1126	0/0:31,0:31:83.96:0,84,1061	0/0:22,0:22:48.54:0,49,676	0/1:23,0:22:6.36:6,0,146	0/1:34,0:34:79.73:231,0,80	0/0:14,0:14:36.67:0,37,309	0/0:6,0:6:8.95:0,9,106	0/0:117,0:116:99:0,246,2396	0/0:15,0:14:8.98:0,9,73	0/1:11,0:9:16.29:20,0,16	0/1:45,0:42:25.49:25,0,267	0/0:16,0:15:1.80:0,2,89	0/0:29,0:28:59.96:0,60,743	0/0:15,0:15:44.95:0,45,495	0/0:10,0:10:26.96:0,27,324
chr10	73053535	.	TA	T	431.40	PASS	AB=0.838;AC=15;AF=0.268;AN=56;BaseQRankSum=1.655;DP=383;FS=2.206;HRun=14;HaplotypeScore=74.8084;InbreedingCoeff=0.2846;MQ=83.99;MQ0=1;MQRankSum=-3.476;QD=3.72;ReadPosRankSum=-0.662;VQSLOD=0.7791;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,2:18:18.17:0,18,287	0/0:8,1:9:0.42:0,0,139	0/0:27,0:18:13.61:0,14,111	0/0:15,0:13:5.17:0,5,53	0/0:15,1:17:10.32:0,10,225	0/0:20,1:21:18.53:0,19,282	0/1:9,1:10:11.20:11,0,137	0/0:19,1:20:23.96:0,24,215	0/0:2,0:2:3:0,3,28	0/0:15,0:16:26.87:0,27,237	0/0:13,1:15:0.28:0,0,129	1/1:1,4:5:14.88:103,15,0	1/1:1,7:8:20.79:144,21,0	0/1:7,3:10:34.12:34,0,126	0/0:3,0:4:11.85:0,12,98	0/0:5,0:5:15:0,15,135	0/0:29,2:33:75.30:0,75,662	0/1:23,0:23:11.53:12,0,54	0/1:14,2:16:5.13:5,0,239	0/1:13,2:15:20.11:20,0,114	0/1:4,2:6:11.59:12,0,41	0/1:4,3:8:5.76:91,0,6	1/1:3,4:7:11.86:82,12,0	1/1:2,5:8:13.21:87,13,0	0/0:20,0:21:27.41:0,27,376	0/0:14,0:15:29.81:0,30,250	0/0:21,1:22:27.40:0,27,381	0/0:7,0:7:14.84:0,15,121
chr10	73053548	.	AAG	A	480.96	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=1.229;DP=402;FS=16.850;HRun=0;HaplotypeScore=83.9511;InbreedingCoeff=0.5256;MQ=78.54;MQ0=1;MQRankSum=-0.553;QD=15.51;ReadPosRankSum=-0.901;VQSLOD=1.8944;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:59.88:0,60,694	0/0:7,0:7:17.84:0,18,222	0/0:20,0:13:5.02:0,5,148	0/0:17,0:15:20.83:0,21,206	0/0:15,0:15:35.40:0,35,460	0/0:21,0:21:30.78:0,31,605	0/0:14,0:14:25.14:0,25,402	0/0:16,0:16:38.18:0,38,417	0/0:3,0:3:9.01:0,9,102	0/0:18,0:18:47.36:0,47,514	0/0:14,0:14:29.77:0,30,346	0/0:7,0:7:20.33:0,20,123	0/0:14,0:14:35.59:0,36,220	0/0:10,0:10:28.67:0,29,296	0/0:6,0:6:18.03:0,18,214	0/0:9,0:9:27.05:0,27,332	0/0:36,0:36:92.55:0,93,1172	1/1:16,7:23:55.60:572,56,0	0/0:20,0:20:53.31:0,53,584	0/0:14,0:14:24.79:0,25,307	0/0:8,0:8:14.76:0,15,129	0/1:8,0:8:12.88:13,0,88	0/0:8,0:8:23.42:0,23,158	0/0:8,0:8:6.23:0,6,67	0/0:22,0:22:43.67:0,44,644	0/0:16,0:16:41.90:0,42,526	0/0:18,0:18:54.02:0,54,725	0/0:8,0:8:23.91:0,24,262
chr10	73053549	.	AG	A	435.38	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=2.544;DP=390;FS=29.102;HRun=1;HaplotypeScore=75.2782;InbreedingCoeff=0.2881;MQ=76.39;MQ0=0;MQRankSum=-3.980;QD=10.88;ReadPosRankSum=0.322;VQSLOD=0.1120;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:58.06:0,58,535	0/0:7,0:7:15.82:0,16,165	0/0:13,1:11:4.15:0,4,120	0/0:14,1:14:13.80:0,14,161	0/0:16,0:16:7.65:0,8,339	0/0:20,0:20:9.64:0,10,432	0/0:13,1:14:0.14:0,0,285	0/0:14,0:14:38.24:0,38,340	0/0:3,0:3:8.88:0,9,72	0/0:18,0:18:46.76:0,47,415	0/0:12,0:12:27.88:0,28,285	0/0:8,0:8:11.24:0,11,82	0/0:13,0:13:2.69:0,3,122	0/0:12,0:12:10.68:0,11,220	0/0:7,0:7:20.95:0,21,191	0/0:9,0:9:27.02:0,27,261	0/0:35,0:35:90.91:0,91,876	1/1:21,2:23:64.32:518,64,0	0/0:19,0:19:39.54:0,40,443	0/0:11,1:12:7.72:0,8,218	0/0:6,1:7:13.51:0,14,107	0/1:7,0:7:20.51:21,0,33	0/0:8,0:8:11.73:0,12,100	0/1:10,0:10:2.18:2,0,43	0/0:21,0:21:43:0,43,476	0/0:16,0:16:41.63:0,42,406	0/0:19,0:19:53.86:0,54,554	0/0:8,0:8:23.32:0,23,205
chr10	73053562	.	TG	T	3609.42	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=9.784;DP=398;FS=0.000;HRun=9;HaplotypeScore=62.1874;InbreedingCoeff=0.9625;MQ=70.54;MQ0=0;MQRankSum=-3.005;QD=19.62;ReadPosRankSum=2.998;VQSLOD=3.9200;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,21:27:66:598,66,0	0/0:5,0:5:15.04:0,15,173	0/0:3,0:3:3.01:0,3,35	0/0:14,0:14:26.91:0,27,325	0/0:17,0:17:30.08:0,30,336	0/0:19,0:19:45.13:0,45,519	0/0:13,0:13:39.05:0,39,423	0/0:13,0:13:33.53:0,34,353	0/0:6,0:6:12.04:0,12,138	1/1:5,12:17:30.16:296,30,0	1/1:1,11:12:30.02:274,30,0	1/1:3,8:11:21:192,21,0	1/1:1,10:11:30.01:274,30,0	0/0:13,0:13:39.12:0,39,450	0/0:12,0:12:33.10:0,33,381	0/0:9,0:9:21.06:0,21,242	1/1:6,29:35:78.02:712,78,0	1/1:3,15:18:35.98:329,36,0	0/0:20,0:20:45.08:0,45,494	0/0:14,0:14:21.06:0,21,242	0/0:11,0:11:27.54:0,28,303	1/1:1,7:8:15:137,15,0	1/1:2,10:12:27.01:247,27,0	1/1:3,12:15:21:192,21,0	1/1:4,14:18:39.02:357,39,0	0/0:16,1:17:24.06:0,24,269	0/0:20,0:20:51.14:0,51,579	0/0:8,0:8:24.06:0,24,267
chr10	73054399	.	C	CTGTT	3065.47	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.044;DP=687;FS=6.630;HRun=0;HaplotypeScore=106.2097;InbreedingCoeff=0.9152;MQ=68.44;MQ0=0;MQRankSum=-1.049;QD=51.09;ReadPosRankSum=2.006;VQSLOD=4.8078;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:37:84.20:1988,84,0	0/0:15,0:15:45.15:0,45,764	0/0:24,0:24:27.13:0,27,598	0/0:28,0:28:53.78:0,54,906	0/0:23,0:23:51.15:0,51,822	0/0:13,0:13:36.12:0,36,611	0/0:22,0:22:54.18:0,54,914	0/0:38,0:37:77.54:0,78,1293	0/0:27,0:27:66.23:0,66,1116	0/0:36,0:36:81.23:0,81,1341	0/0:22,0:22:54.18:0,54,912	0/0:30,0:30:63.18:0,63,1011	0/0:29,0:29:72.25:0,72,1212	0/0:30,0:30:66.23:0,66,1116	0/0:26,0:26:63.21:0,63,1061	0/0:19,0:19:48.16:0,48,815	0/0:31,1:33:3.31:0,3,1181	1/1:4,18:23:48.16:1199,48,0	0/0:20,0:20:48.11:0,48,755	0/0:24,0:24:60.21:0,60,1016	0/0:37,0:37:93.32:0,93,1578	0/0:10,0:10:27.06:0,27,401	0/0:15,0:15:27.09:0,27,458	0/0:24,0:24:57.19:0,57,959	0/0:19,0:19:48.14:0,48,787	0/0:32,0:32:87.30:0,87,1462	0/0:23,0:22:54.18:0,54,909	0/0:8,0:8:18.06:0,18,305
chr10	73054593	.	A	ATG	3645.82	PASS	AB=0.582;AC=6;AF=0.107;AN=56;BaseQRankSum=-10.376;DP=796;FS=1.950;HRun=0;HaplotypeScore=97.1414;InbreedingCoeff=0.6932;MQ=62.44;MQ0=5;MQRankSum=1.075;QD=31.98;ReadPosRankSum=1.140;VQSLOD=5.8952;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:45:79.15:0,79,1135	0/0:13,0:13:32.82:0,33,382	0/0:39,0:18:25.19:0,25,273	0/0:32,0:26:17.10:0,17,206	0/0:18,0:18:45.14:0,45,547	0/0:25,0:27:68.85:0,69,773	0/0:29,0:29:63.17:0,63,745	0/0:36,0:37:63.17:0,63,739	0/0:37,0:37:99:0,102,1236	0/1:10,22:32:99:866,0,108	0/1:3,9:12:3.53:438,0,4	0/0:22,0:22:57.18:0,57,696	0/0:29,0:29:78.23:0,78,941	0/0:30,0:32:78.06:0,78,918	0/0:34,0:34:68.42:0,68,964	0/0:27,0:27:74.80:0,75,866	1/1:7,29:36:41.59:1163,42,0	0/0:22,0:22:54.08:0,54,614	0/0:15,0:15:21.20:0,21,274	0/0:27,0:27:63.19:0,63,759	0/0:56,0:56:99:0,129,1463	0/0:16,0:17:35.91:0,36,405	0/0:21,0:21:38.40:0,38,475	0/0:38,0:38:81.14:0,81,1088	1/1:8,26:34:41.60:1179,42,0	0/0:26,0:26:57.16:0,57,675	0/0:11,0:11:30.09:0,30,367	0/0:25,0:26:63.03:0,63,747
chr10	73056000	.	T	TA	280.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.510;DP=392;FS=0.000;HRun=12;HaplotypeScore=48.4336;InbreedingCoeff=0.5252;MQ=75.39;MQ0=0;MQRankSum=1.618;QD=13.36;ReadPosRankSum=1.172;VQSLOD=3.5151;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:35:68.59:0,69,472	0/0:4,0:4:11.93:0,12,87	0/0:9,0:9:3.91:0,4,58	0/0:10,0:10:2.22:0,2,9	0/0:12,1:13:3.61:0,4,186	0/0:9,0:11:15.92:0,16,99	0/0:16,0:19:50.82:0,51,342	0/0:22,0:23:40.71:0,41,289	0/0:11,0:11:23.80:0,24,172	0/0:17,0:19:43.73:0,44,312	0/0:12,0:12:26.81:0,27,197	0/0:13,0:13:23.76:0,24,175	0/0:7,0:7:11.91:0,12,88	0/0:16,0:16:26.78:0,27,197	0/0:8,0:8:17.89:0,18,131	0/0:14,0:14:41.75:0,42,305	0/0:23,0:26:54.75:0,55,384	1/1:6,14:21:23.47:373,23,0	0/0:16,1:17:0.63:0,1,166	0/0:9,0:9:17.88:0,18,131	0/0:10,0:10:20.84:0,21,153	0/0:6,0:6:11.92:0,12,88	0/0:9,0:9:17.89:0,18,131	0/0:19,1:22:25.55:0,26,330	0/0:13,0:13:35.69:0,36,257	0/0:13,0:13:32.78:0,33,238	0/0:14,0:14:32.80:0,33,241	0/0:8,0:8:20.85:0,21,153
chr10	73056853	.	T	TG	3900.95	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.636;DP=676;FS=1.253;HRun=7;HaplotypeScore=83.5985;InbreedingCoeff=0.9958;MQ=79.64;MQ0=0;MQRankSum=-1.433;QD=27.86;ReadPosRankSum=0.911;VQSLOD=4.1645;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:29:48.15:580,48,0	0/0:16,0:16:45.07:0,45,434	0/0:21,0:21:35.41:0,35,319	0/0:15,0:15:14.11:0,14,227	0/0:22,0:22:54.07:0,54,521	0/0:15,0:15:42.07:0,42,406	0/0:46,0:46:99:0,111,1072	0/0:33,0:33:66.08:0,66,637	0/0:29,0:29:84.14:0,84,811	1/1:4,25:29:78.24:941,78,0	1/1:3,11:14:33.10:393,33,0	0/0:36,0:36:84.11:0,84,811	0/0:20,0:20:57.06:0,57,539	0/0:13,0:13:39.06:0,39,376	0/0:26,0:26:72.10:0,72,690	0/0:15,0:15:42.06:0,42,406	1/1:5,18:23:54.17:652,54,0	1/1:1,18:19:51.16:615,51,0	0/0:26,0:26:72.10:0,72,690	0/0:26,0:26:60.55:0,61,580	0/0:44,0:44:99:0,105,1013	0/0:17,0:17:42.06:0,42,405	0/0:25,0:25:29.40:0,29,462	0/0:22,0:22:60.09:0,60,579	1/1:2,24:26:60.18:720,60,0	0/0:31,0:31:81.13:0,81,782	0/0:26,0:26:69.10:0,69,666	0/0:12,0:12:33.05:0,33,319
chr10	73057331	.	GTCCTCATCCT	G	264.48	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.249;DP=770;FS=0.000;HRun=0;HaplotypeScore=221.8477;InbreedingCoeff=0.9681;MQ=84.37;MQ0=0;MQRankSum=-3.431;QD=14.69;ReadPosRankSum=-0.495;VQSLOD=2.4564;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,6179	0/0:15,0:15:45.15:0,45,2263	0/0:27,0:27:74.94:0,75,3310	0/0:26,0:26:75.25:0,75,3095	0/0:21,0:21:60.21:0,60,3050	0/0:19,0:19:51.16:0,51,2551	0/0:28,0:28:81.26:0,81,3668	0/0:31,0:31:81.27:0,81,3866	0/0:30,0:30:87.26:0,87,4012	0/0:22,0:23:66.19:0,66,2889	0/0:14,0:14:39.12:0,39,1902	0/0:48,0:48:99:0,135,6554	0/0:27,0:27:75.22:0,75,3539	0/0:28,0:28:81.28:0,81,3949	0/0:35,0:35:99:0,105,5436	0/0:34,0:34:99:0,99,4811	0/0:42,0:42:99:0,120,5783	1/1:2,16:18:12.04:350,12,0	0/0:25,0:25:63.21:0,63,2794	0/0:14,0:14:36.11:0,36,1620	0/0:43,0:43:99:0,123,5839	0/0:22,0:22:60.21:0,60,2980	0/0:23,0:23:66.20:0,66,2939	0/0:37,0:37:99:0,99,4870	0/0:17,0:17:51.16:0,51,2382	0/0:34,0:34:99:0,99,5047	0/0:32,0:32:93.31:0,93,4542	0/0:11,0:11:33.11:0,33,1625
chr10	73057828	.	GAC	G	679.35	PASS	AB=0.928;AC=24;AF=0.571;AN=42;BaseQRankSum=0.581;DP=529;FS=2.195;HRun=0;HaplotypeScore=81.1568;InbreedingCoeff=0.3619;MQ=69.44;MQ0=11;MQRankSum=0.904;QD=2.33;ReadPosRankSum=1.692;VQSLOD=1.6277;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:5.30:16,5,0	1/1:3,1:5:2.98:32,3,0	./.	./.	./.	0/1:13,0:12:4.93:29,0,5	1/1:32,6:38:9.02:95,9,0	./.	1/1:15,3:18:5.63:63,6,0	0/0:21,0:21:14.91:0,15,131	0/0:12,0:12:14.98:0,15,136	1/1:16,0:21:19.54:93,20,0	1/1:17,0:23:5.68:28,6,0	0/1:10,6:16:11.89:83,0,12	0/0:11,6:17:0:0,0,0	1/1:8,6:14:12.03:127,12,0	0/0:27,0:27:23.95:0,24,220	0/0:17,0:23:12.02:0,12,136	1/1:17,0:16:2.96:19,3,0	./.	0/1:59,1:59:45.28:53,0,45	./.	./.	0/0:23,0:23:0:0,0,0	0/0:13,0:17:3:0,3,26	1/1:11,2:12:6.01:64,6,0	1/1:7,7:14:9.02:95,9,0	0/1:15,0:14:6.43:24,0,6
chr10	73058172	.	CCTT	C	3654.22	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.355;DP=626;FS=4.050;HRun=0;HaplotypeScore=102.2884;InbreedingCoeff=0.9919;MQ=64.98;MQ0=28;MQRankSum=-6.983;QD=38.87;ReadPosRankSum=1.546;VQSLOD=4.3896;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:28:53.11:0,53,1418	0/0:5,0:5:12.04:0,12,277	0/0:22,0:17:41.02:0,41,839	0/0:14,0:12:29.76:0,30,564	0/0:22,0:22:54.19:0,54,1203	0/0:21,0:21:57.19:0,57,1241	0/0:18,0:18:29.10:0,29,834	0/0:33,0:29:84.28:0,84,1773	0/0:25,0:24:72.24:0,72,1566	0/0:28,0:25:61.04:0,61,1241	0/0:15,0:14:35.10:0,35,811	1/1:4,20:21:54.14:879,54,0	1/1:1,21:22:60.20:1019,60,0	0/0:22,0:21:60.21:0,60,1354	0/0:28,0:27:72.25:0,72,1638	0/0:16,0:14:36.12:0,36,763	0/0:31,0:27:31.86:0,32,1002	0/0:15,0:14:32.63:0,33,758	0/0:32,0:27:75.23:0,75,1440	0/0:17,0:17:31.67:0,32,909	0/0:25,0:24:69.17:0,69,1494	1/1:1,18:19:51.13:807,51,0	1/1:2,15:17:35.99:559,36,0	1/1:5,7:11:25.27:390,25,0	0/0:24,0:21:42.14:0,42,905	0/0:33,0:33:99:0,99,2282	0/0:30,0:29:86.77:0,87,1876	0/0:25,0:25:48.24:0,48,1416
chr10	73058208	.	TCTC	T	1061.32	PASS	AB=0.967;AC=9;AF=0.173;AN=52;BaseQRankSum=4.621;DP=723;FS=0.550;HRun=0;HaplotypeScore=138.8379;InbreedingCoeff=0.0396;MQ=45.91;MQ0=61;MQRankSum=-2.488;QD=4.96;ReadPosRankSum=-2.652;VQSLOD=1.9145;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:31:37.47:0,37,614	0/0:8,0:7:15.05:0,15,244	./.	0/0:3,0:2:3.01:0,3,30	0/0:26,0:24:65.23:0,65,1222	0/0:32,0:29:25.62:0,26,1021	0/0:43,0:39:78.30:0,78,1291	0/0:32,0:17:36.94:0,37,350	0/0:28,0:27:66.21:0,66,1228	0/1:44,0:36:50.26:556,0,50	1/1:20,0:16:22.77:262,23,0	0/1:26,1:23:33.04:33,0,177	0/1:23,0:20:60.58:61,0,145	0/0:32,0:28:63.17:0,63,1045	0/0:24,0:23:57.18:0,57,1042	0/0:28,0:25:49.42:0,49,761	0/1:27,1:23:37.56:39,0,38	0/0:17,0:16:23.77:0,24,480	0/0:26,0:18:47.99:0,48,810	0/0:22,0:22:53.34:0,53,920	0/0:42,0:40:82.04:0,82,1792	0/1:28,1:26:72.15:72,0,129	0/1:22,2:24:99:106,0,219	0/1:18,1:15:76.10:76,0,130	./.	0/0:38,0:37:99:0,105,1781	0/0:29,0:27:78:0,78,1369	0/0:26,0:19:48.13:0,48,841
chr10	73058211	.	C	CCTT	1450.79	PASS	AB=0.890;AC=9;AF=0.173;AN=52;BaseQRankSum=4.948;DP=726;FS=0.000;HRun=0;HaplotypeScore=141.4522;InbreedingCoeff=0.0391;MQ=45.64;MQ0=63;MQRankSum=-3.488;QD=6.78;ReadPosRankSum=-2.049;VQSLOD=2.3588;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:24.54:0,25,598	0/0:8,0:7:15.05:0,15,255	./.	0/0:2,0:1:3.01:0,3,30	0/0:27,0:25:51.78:0,52,1090	0/0:33,0:30:14.90:0,15,1075	0/0:43,0:39:78.30:0,78,1338	0/0:29,0:14:36.94:0,37,350	0/0:27,0:26:66.21:0,66,1089	0/1:12,32:36:32.56:902,0,33	1/1:6,14:16:23.95:333,24,0	0/1:26,0:22:72.12:72,0,140	0/1:21,0:18:33.06:33,0,116	0/0:32,0:28:63.17:0,63,985	0/0:27,0:25:60.17:0,60,965	0/0:27,0:24:56.86:0,57,773	0/1:13,15:23:48.37:63,0,48	0/0:18,0:17:41.70:0,42,520	0/0:28,0:19:50.99:0,51,778	0/0:22,0:22:54.17:0,54,848	0/0:43,0:41:85.04:0,85,1629	0/1:30,0:26:19.08:19,0,133	0/1:24,0:24:88.82:89,0,165	0/1:19,0:15:83.37:83,0,150	./.	0/0:38,0:37:99:0,105,1660	0/0:29,0:27:78:0,78,1290	0/0:27,0:20:48.13:0,48,753
chr10	73058220	.	CCTT	C	2115.39	PASS	AB=0.863;AC=11;AF=0.212;AN=52;BaseQRankSum=11.008;DP=712;FS=12.044;HRun=0;HaplotypeScore=138.6984;InbreedingCoeff=-0.0276;MQ=45.14;MQ0=61;MQRankSum=-8.120;QD=8.53;ReadPosRankSum=0.381;VQSLOD=2.7700;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,4:31:55.81:327,0,56	0/0:7,0:6:15.05:0,15,310	./.	./.	0/0:28,0:26:69.21:0,69,1332	0/0:36,0:34:89.14:0,89,1512	0/0:42,1:39:85:0,85,1456	0/0:28,0:14:38.91:0,39,355	0/0:25,0:24:60.21:0,60,1201	0/0:46,0:36:47.38:0,47,840	0/0:23,0:18:18.92:0,19,161	0/1:14,6:17:99:357,0,158	0/1:12,8:17:99:380,0,228	0/0:30,0:26:57.16:0,57,1049	0/0:28,0:25:57.16:0,57,1055	0/0:27,0:26:32.34:0,32,915	0/1:26,0:22:2.66:3,0,125	1/1:18,1:18:33.97:289,34,0	0/0:27,0:17:48.14:0,48,901	0/1:21,0:21:43.69:44,0,891	0/0:45,0:43:42.23:0,42,2022	0/1:20,8:24:99:432,0,125	0/1:13,7:20:99:248,0,297	0/1:18,3:17:99:140,0,339	0/0:18,0:13:10.11:0,10,46	0/1:39,0:38:44.34:44,0,1810	0/0:24,0:23:49.52:0,50,1303	0/0:26,0:19:48.16:0,48,914
chr10	73058256	.	CCTT	C	869.84	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=6.051;DP=714;FS=3.296;HRun=0;HaplotypeScore=133.5533;InbreedingCoeff=0.3946;MQ=47.89;MQ0=39;MQRankSum=-0.621;QD=6.30;ReadPosRankSum=2.526;VQSLOD=2.9326;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:29:19.24:313,19,0	0/0:11,0:10:21.06:0,21,323	0/0:17,0:4:6.02:0,6,94	0/0:10,0:4:5.75:0,6,32	1/1:11,15:23:39.13:535,39,0	0/0:31,0:28:45.11:0,45,712	0/0:39,0:35:51.16:0,51,775	0/0:29,0:24:35.92:0,36,482	0/0:26,1:26:0.50:0,0,617	0/1:40,0:33:31.60:32,0,145	0/1:23,0:19:44.61:55,0,45	0/0:21,0:18:25.38:0,25,143	0/0:22,0:19:31.95:0,32,288	0/0:26,0:24:48.13:0,48,810	0/0:27,0:24:3.55:0,4,691	0/0:31,0:29:51.17:0,51,918	0/0:23,0:20:17.27:0,17,195	0/0:14,0:14:20.80:0,21,100	0/0:25,0:22:36.07:0,36,570	0/0:27,0:26:39.12:0,39,600	0/0:46,0:44:90.24:0,90,1470	0/0:27,0:23:22.71:0,23,152	0/0:23,0:23:34.36:0,34,257	0/0:25,0:22:43.38:0,43,352	0/1:17,0:16:29.17:76,0,29	0/0:36,0:36:69.23:0,69,1157	0/0:23,0:23:54.18:0,54,925	0/0:16,0:15:21.07:0,21,376
chr10	73059496	.	A	AC	2756.49	PASS	AB=0.585;AC=11;AF=0.196;AN=56;BaseQRankSum=-4.927;DP=638;FS=1.871;HRun=8;HaplotypeScore=69.0819;InbreedingCoeff=0.8712;MQ=79.69;MQ0=0;MQRankSum=-1.088;QD=20.12;ReadPosRankSum=1.117;VQSLOD=3.6191;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:36:83.05:0,83,746	0/0:7,0:7:18:0,18,165	0/0:24,0:23:23.73:0,24,383	0/0:19,0:18:41.59:0,42,354	0/0:19,0:19:56.99:0,57,508	0/0:15,0:15:39.02:0,39,357	0/0:29,0:29:69.01:0,69,625	0/0:25,1:27:7.33:0,7,311	0/0:25,0:26:71.05:0,71,632	0/0:26,0:26:63.03:0,63,576	0/0:5,0:5:12:0,12,106	1/1:1,22:24:60.01:671,60,0	1/1:0,20:20:57.17:658,57,0	0/0:17,0:17:36:0,36,329	0/0:29,0:29:75.03:0,75,686	0/0:16,0:16:48.03:0,48,439	0/0:41,0:42:99:0,113,1021	1/1:3,0:20:32.49:161,32,0	0/0:14,0:14:29.96:0,30,267	0/0:21,0:21:60:0,60,539	0/0:49,0:49:99:0,129,1180	0/1:7,17:24:3.44:468,0,3	1/1:2,13:16:11.48:367,11,0	1/1:9,24:33:8.67:603,9,0	0/0:18,0:18:51.02:0,51,463	0/0:19,0:20:56.06:0,56,496	0/0:35,0:35:95.99:0,96,863	0/0:7,0:7:12:0,12,110
chr10	73061488	.	GCT	G	54.25	PASS	AB=0.849;AC=2;AF=0.036;AN=56;BaseQRankSum=4.125;DP=613;FS=0.000;HRun=0;HaplotypeScore=114.8456;InbreedingCoeff=-0.0369;MQ=73.68;MQ0=0;MQRankSum=4.115;QD=2.01;ReadPosRankSum=-3.614;VQSLOD=1.2276;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,138,2645	0/0:8,0:8:24.08:0,24,463	0/1:9,4:13:99:122,0,417	0/1:13,1:14:19.78:20,0,476	0/0:26,0:26:78.27:0,78,1503	0/0:28,0:28:84.27:0,84,1590	0/0:41,0:41:99:0,108,2024	0/0:19,0:19:36.12:0,36,685	0/0:23,0:23:69.24:0,69,1307	0/0:18,0:18:51.17:0,51,942	0/0:19,0:19:54.19:0,54,1030	0/0:23,0:23:66.23:0,66,1264	0/0:17,0:17:51.13:0,51,946	0/0:19,0:19:57.20:0,57,1097	0/0:14,0:14:39.13:0,39,740	0/0:15,0:15:45.15:0,45,869	0/0:32,0:32:96.33:0,96,1850	0/0:24,0:24:72.22:0,72,1338	0/0:16,0:16:45.15:0,45,870	0/0:16,0:16:45.15:0,45,857	0/0:39,0:39:99:0,114,2199	0/0:25,0:25:60.21:0,60,1146	0/0:15,0:15:42.14:0,42,800	0/0:33,0:32:93.32:0,93,1795	0/0:20,0:20:60.21:0,60,1158	0/0:21,0:21:63.21:0,63,1193	0/0:15,0:15:45.15:0,45,853	0/0:10,0:10:30.10:0,30,575
chr10	73061678	.	C	CAT	5474.39	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.888;DP=544;FS=5.866;HRun=0;HaplotypeScore=114.6977;InbreedingCoeff=0.9969;MQ=88.39;MQ0=0;MQRankSum=-15.599;QD=35.78;ReadPosRankSum=1.900;VQSLOD=7.1983;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:28:51.21:969,51,0	0/0:7,0:7:18.03:0,18,266	0/0:18,0:18:54.18:0,54,856	0/0:28,0:28:69.21:0,69,1081	0/0:30,0:30:83.80:0,84,1356	0/0:29,0:29:87.25:0,87,1391	0/0:31,0:31:90.29:0,90,1434	0/0:20,0:20:54.18:0,54,879	0/0:25,0:25:75.26:0,75,1224	1/1:1,13:14:36.12:547,36,0	1/1:1,6:7:17.89:224,18,0	1/1:0,17:17:37.03:685,37,0	1/1:2,9:11:30.10:443,30,0	0/0:25,0:25:75.24:0,75,1197	0/0:21,0:21:63.22:0,63,1028	0/0:19,0:19:57.18:0,57,907	1/1:3,13:16:38.92:535,39,0	1/1:0,7:10:27.09:380,27,0	0/0:25,0:25:72.24:0,72,1142	0/0:15,0:15:42.14:0,42,684	0/0:32,0:32:96.31:0,96,1540	1/1:0,14:13:36.12:500,36,0	1/1:0,8:8:24.08:349,24,0	1/1:2,14:17:37.07:486,37,0	1/1:1,8:9:26.95:357,27,0	0/0:19,0:19:54.18:0,54,881	0/0:20,0:20:60.20:0,60,973	0/0:27,0:27:81.27:0,81,1299
chr10	73061679	.	C	CG	1703.97	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=17.029;DP=545;FS=5.172;HRun=0;HaplotypeScore=118.9257;InbreedingCoeff=0.9959;MQ=87.14;MQ0=0;MQRankSum=-15.666;QD=11.06;ReadPosRankSum=3.200;VQSLOD=4.0123;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,23:28:66.83:349,67,0	0/0:7,0:7:18.03:0,18,230	0/0:18,0:18:54.18:0,54,754	0/0:25,0:26:72.18:0,72,944	0/0:30,0:30:84.23:0,84,1138	0/0:29,0:29:84.28:0,84,1174	0/0:30,0:30:90.28:0,90,1223	0/0:21,0:21:54.18:0,54,746	0/0:25,0:25:75.25:0,75,1042	1/1:1,13:14:34.79:190,35,0	1/1:1,6:7:16.18:78,16,0	1/1:0,17:17:36.43:220,36,0	1/1:3,9:12:28.72:162,29,0	0/0:26,0:26:72.23:0,72,989	0/0:21,0:21:63.21:0,63,877	0/0:20,0:20:57.18:0,57,775	1/1:3,13:16:36.46:195,36,0	1/1:3,7:10:26.38:166,26,0	0/0:24,0:24:72.22:0,72,970	0/0:15,0:15:42.14:0,42,587	0/0:32,0:32:96.27:0,96,1318	1/1:2,14:13:34.43:181,34,0	1/1:0,8:8:22.08:117,22,0	1/1:3,14:17:32.65:158,33,0	1/1:1,8:9:24.35:114,24,0	0/0:20,0:20:54.18:0,54,752	0/0:20,0:20:60.17:0,60,803	0/0:27,0:27:81.26:0,81,1114
chr10	73061680	.	C	CTAA	9583.55	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.991;DP=588;FS=1.507;HRun=0;HaplotypeScore=138.3327;InbreedingCoeff=0.9977;MQ=84.26;MQ0=0;MQRankSum=-17.339;QD=48.40;ReadPosRankSum=2.013;VQSLOD=6.8127;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,25:41:99:1817,102,0	0/0:7,0:7:18.06:0,18,332	0/0:19,0:19:54.19:0,54,1006	0/0:25,0:25:69.24:0,69,1261	0/0:30,0:30:81.28:0,81,1508	0/0:29,0:29:84.29:0,84,1565	0/0:31,0:31:87.26:0,87,1576	0/0:22,0:22:54.16:0,54,943	0/0:25,0:25:75.24:0,75,1353	1/1:4,13:17:48.16:1010,48,0	1/1:3,7:10:24.04:417,24,0	1/1:3,17:20:60.20:1180,60,0	1/1:2,11:13:36.12:736,36,0	0/0:25,0:25:72.20:0,72,1305	0/0:21,0:21:63.20:0,63,1114	0/0:20,0:20:60.17:0,60,1043	1/1:7,14:21:53.92:1013,54,0	1/1:6,7:13:20.22:612,20,0	0/0:24,0:24:69.23:0,69,1246	0/0:15,0:15:42.14:0,42,766	0/0:32,0:32:96.33:0,96,1765	1/1:6,14:17:32.83:862,33,0	1/1:2,8:10:29.67:500,30,0	1/1:5,15:20:34.42:707,34,0	1/1:4,9:13:36.08:730,36,0	0/0:20,0:20:57.11:0,57,990	0/0:18,0:18:54.18:0,54,993	0/0:27,0:27:81.28:0,81,1508
chr10	73062104	.	GAT	G	218.87	PASS	AB=0.871;AC=11;AF=0.204;AN=54;BaseQRankSum=6.274;DP=251;FS=37.919;HRun=0;HaplotypeScore=45.8145;InbreedingCoeff=-0.2604;MQ=79.17;MQ0=7;MQRankSum=-2.433;QD=1.39;ReadPosRankSum=4.544;VQSLOD=-0.4016;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:30.08:0,30,419	0/0:1,0:1:0:0,0,0	0/1:39,0:16:9.58:10,0,371	0/1:31,0:18:38.37:54,0,38	0/1:8,1:9:12.30:12,0,123	0/0:3,0:3:6.02:0,6,91	0/0:20,1:22:25.42:0,25,643	0/1:2,1:3:14.20:14,0,40	0/1:10,0:10:25.62:26,0,229	0/0:5,0:5:15.05:0,15,208	0/0:1,0:1:3.01:0,3,45	0/0:4,0:4:10.58:0,11,122	0/1:3,0:3:11.99:12,0,81	0/1:6,5:12:39.72:40,0,78	0/1:3,1:4:29.69:30,0,79	0/1:6,0:8:46.36:46,0,196	0/1:17,5:22:82.16:82,0,446	0/0:8,0:8:24.03:0,24,291	0/0:7,0:7:18.06:0,18,269	0/0:4,0:4:9:0,9,113	0/0:10,0:10:24.06:0,24,340	0/0:1,0:1:3.01:0,3,45	0/0:2,0:2:6.02:0,6,88	./.	0/0:6,0:6:17.41:0,17,187	0/0:3,0:3:9.03:0,9,125	0/1:13,2:15:32.06:32,0,297	0/0:3,0:3:9.03:0,9,134
chr10	73062128	.	TA	T	1637.09	PASS	AB=0.842;AC=15;AF=0.268;AN=56;BaseQRankSum=3.694;DP=332;FS=6.164;HRun=10;HaplotypeScore=50.9747;InbreedingCoeff=0.6496;MQ=82.74;MQ0=2;MQRankSum=-2.685;QD=14.36;ReadPosRankSum=2.875;VQSLOD=3.5823;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:17:47.99:417,48,0	0/0:3,0:3:9.02:0,9,100	0/0:26,1:17:11.80:0,12,257	0/0:21,0:17:13.40:0,13,174	0/1:8,1:9:7.53:8,0,149	0/0:10,1:11:0.98:0,1,226	0/0:20,0:20:39.11:0,39,431	0/0:14,1:15:39.10:0,39,424	0/0:12,0:12:32.32:0,32,322	1/1:2,14:16:41.57:348,42,0	1/1:0,4:4:8.99:78,9,0	0/0:10,0:10:27.06:0,27,290	0/0:4,0:4:12.03:0,12,133	0/0:13,0:13:27.96:0,28,301	0/0:10,0:10:30.08:0,30,332	0/0:13,0:13:24.02:0,24,252	1/1:7,19:26:50.78:443,51,0	1/1:3,10:13:29.99:260,30,0	0/1:12,2:14:19.02:19,0,266	0/0:3,0:3:9.02:0,9,100	0/0:14,0:14:39.11:0,39,431	0/1:2,1:3:17.04:17,0,49	0/0:7,0:7:18.05:0,18,199	0/0:3,0:3:9.02:0,9,100	1/1:2,9:11:26.99:234,27,0	0/0:5,0:5:12.03:0,12,133	0/0:17,0:16:23.96:0,24,248	0/0:10,0:10:30.06:0,30,322
chr10	73063022	.	TTCCTCCTCTTCC	T	4102.07	PASS	AB=0.973;AC=11;AF=0.196;AN=56;BaseQRankSum=10.187;DP=697;FS=1.591;HRun=0;HaplotypeScore=229.4741;InbreedingCoeff=0.6565;MQ=58.96;MQ0=9;MQRankSum=-4.098;QD=24.71;ReadPosRankSum=-1.071;VQSLOD=2.5606;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:78.62:79,0,1992	0/0:13,0:12:29.82:0,30,1516	0/0:41,0:21:45.78:0,46,1206	0/0:43,0:19:39.05:0,39,1062	0/0:22,0:22:63.19:0,63,2934	0/0:25,0:25:69.16:0,69,2983	0/0:34,0:34:96.30:0,96,3990	0/0:29,0:28:72.19:0,72,2276	0/0:25,0:25:75.21:0,75,3252	1/1:0,23:23:69.23:1673,69,0	1/1:1,22:23:42.02:1020,42,0	0/0:29,0:29:54.74:0,55,3427	0/0:25,0:25:40.16:0,40,2736	0/0:25,0:25:75.25:0,75,3930	0/0:23,0:23:66.23:0,66,3203	0/0:17,0:17:48.16:0,48,2572	1/1:4,19:23:16.61:509,17,0	0/1:24,0:24:39.36:39,0,1828	0/0:18,0:16:39.12:0,39,1354	0/0:25,0:25:72.22:0,72,3074	0/0:21,0:21:51.15:0,51,2045	0/0:16,0:16:38.42:0,38,1820	0/0:22,0:22:58.91:0,59,2749	0/0:32,0:32:61.33:0,61,3762	1/1:2,21:23:21.07:736,21,0	0/1:21,2:23:44.75:45,0,2695	0/0:31,0:31:87.26:0,87,3925	0/0:13,0:13:36.12:0,36,1910
chr10	73063439	.	C	CT	779.98	PASS	AB=0.867;AC=19;AF=0.339;AN=56;BaseQRankSum=-5.348;DP=518;FS=0.000;HRun=15;HaplotypeScore=91.4190;InbreedingCoeff=0.1159;MQ=69.35;MQ0=5;MQRankSum=1.372;QD=2.95;ReadPosRankSum=-2.000;VQSLOD=-0.0822;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:38.66:0,39,108	0/1:5,1:7:8.38:8,0,61	0/0:25,0:12:14.36:0,14,79	0/1:20,1:12:11.84:12,0,22	0/1:21,4:27:49.55:50,0,92	0/1:17,2:19:18.22:18,0,125	0/0:15,1:16:15.91:0,16,204	0/0:23,1:24:24.24:0,24,141	0/1:13,2:15:21.85:22,0,103	0/0:25,0:25:32.40:0,32,91	0/0:23,0:23:32.48:0,32,91	1/1:1,7:8:11.99:101,12,0	1/1:1,6:7:1.99:110,2,0	0/1:15,4:19:47.02:47,0,84	0/1:16,2:19:18.87:19,0,118	0/0:14,0:14:26.29:0,26,160	0/0:21,0:21:32.54:0,33,91	0/0:17,0:17:24.44:0,24,69	0/0:18,0:20:21.52:0,22,118	0/1:24,4:28:33.87:34,0,155	0/1:13,1:14:8.14:8,0,71	1/1:6,6:14:16.06:169,16,0	0/1:7,14:21:2.68:183,0,3	1/1:5,10:14:17.98:151,18,0	0/0:15,0:15:12.11:0,12,34	0/1:26,3:29:24.33:24,0,193	0/0:20,0:23:12.83:0,13,155	0/0:3,0:4:10.86:0,11,60
chr10	73063451	.	TTTTA	T	4025.90	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=4.758;DP=510;FS=0.000;HRun=0;HaplotypeScore=91.8957;InbreedingCoeff=0.8801;MQ=64.31;MQ0=5;MQRankSum=-2.007;QD=31.70;ReadPosRankSum=5.456;VQSLOD=3.2998;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:59.98:936,60,0	0/0:9,0:9:27.07:0,27,517	0/0:25,0:10:23.67:0,24,409	0/0:20,0:10:23.99:0,24,296	0/0:28,0:28:81.65:0,82,1548	0/0:16,0:16:48.14:0,48,1074	0/0:16,0:16:48.16:0,48,1127	0/0:21,0:20:60.13:0,60,1081	0/0:16,0:15:45.15:0,45,997	1/1:2,22:24:66.08:949,66,0	1/1:0,24:24:65.74:923,66,0	0/0:13,0:13:30.05:0,30,454	0/0:8,0:8:21.07:0,21,444	0/0:16,0:16:45.13:0,45,985	0/0:21,0:21:63.17:0,63,1283	0/0:14,0:14:42.11:0,42,923	1/1:0,22:22:51.12:839,51,0	0/1:19,0:19:10.87:37,0,11	0/0:17,0:17:48.05:0,48,877	0/0:28,0:28:84.22:0,84,1724	0/0:12,0:12:35.06:0,35,625	0/0:14,0:14:42.11:0,42,807	0/0:24,0:24:64.06:0,64,1207	0/0:12,0:11:21.07:0,21,442	1/1:0,12:12:23.95:342,24,0	0/0:28,0:28:84.22:0,84,1723	0/0:18,0:18:54.18:0,54,1225	0/0:7,0:7:8.65:0,9,369
chr10	73063452	.	TTTA	T	2561	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=10.250;DP=507;FS=3.023;HRun=0;HaplotypeScore=86.7794;InbreedingCoeff=0.8973;MQ=64.39;MQ0=5;MQRankSum=-1.197;QD=19.26;ReadPosRankSum=5.910;VQSLOD=3.4089;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:25,1:26:60.02:588,60,0	0/0:9,0:9:27.06:0,27,421	0/0:26,0:11:23.50:0,23,311	0/0:20,0:10:22.62:0,23,199	0/0:28,0:28:61.78:0,62,1190	0/0:16,0:16:45.14:0,45,852	0/0:16,0:16:48.16:0,48,917	0/0:20,0:19:57.11:0,57,870	0/0:16,0:15:45.14:0,45,800	1/1:23,0:23:66.03:615,66,0	1/1:24,0:24:65.66:573,66,0	0/0:13,0:13:30.05:0,30,371	0/0:8,0:8:21.07:0,21,344	0/0:16,0:16:45.13:0,45,802	0/0:21,0:21:63.16:0,63,1047	0/0:14,0:14:39.11:0,39,744	1/1:22,0:22:51.03:488,51,0	1/1:15,4:19:32.81:256,33,0	0/0:17,0:17:45.11:0,45,689	0/0:27,0:27:76.99:0,77,1313	0/0:10,0:10:27.08:0,27,479	0/0:15,0:15:42.11:0,42,653	0/0:24,0:24:63.63:0,64,976	0/0:12,0:11:21.07:0,21,342	1/1:12,0:12:23.91:211,24,0	0/0:28,0:28:83.70:0,84,1402	0/0:18,0:18:54.17:0,54,971	0/1:7,0:7:20.24:20,0,290
chr10	73063453	.	TTA	T	2241.93	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.905;DP=505;FS=4.339;HRun=0;HaplotypeScore=78.8127;InbreedingCoeff=0.9426;MQ=64.48;MQ0=5;MQRankSum=-1.827;QD=17.79;ReadPosRankSum=5.680;VQSLOD=3.4728;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:59.77:461,60,0	0/0:10,0:10:29.99:0,30,364	0/0:26,0:11:23.56:0,24,232	0/0:21,0:11:14.91:0,15,183	0/0:27,0:27:77.86:0,78,877	0/0:15,0:15:45.12:0,45,659	0/0:16,0:16:48.12:0,48,701	0/0:20,0:19:55.25:0,55,670	0/0:16,0:15:45.05:0,45,602	1/1:23,0:23:65.81:521,66,0	1/1:24,0:24:65.46:479,65,0	0/0:13,0:13:30.03:0,30,302	0/0:8,0:8:21.05:0,21,246	0/0:16,0:16:44.92:0,45,620	0/0:22,0:22:66.09:0,66,845	0/0:14,0:14:42.11:0,42,612	1/1:22,0:22:50.83:394,51,0	1/1:5,14:19:36.04:397,36,0	0/0:17,0:17:41.97:0,42,507	0/0:26,0:26:72.18:0,72,997	0/0:9,0:9:27.07:0,27,381	0/0:14,0:14:42.07:0,42,494	0/0:24,0:24:63.49:0,63,749	0/0:12,0:11:21.05:0,21,247	1/1:12,0:12:23.83:175,24,0	0/0:28,0:28:60.74:0,61,1063	0/0:18,0:18:53.81:0,54,718	0/0:7,0:7:0.02:0,0,219
chr10	73064284	.	T	TATAG	1917	PASS	AB=0.912;AC=15;AF=0.300;AN=50;BaseQRankSum=-4.300;DP=543;FS=0.647;HRun=0;HaplotypeScore=132.4057;InbreedingCoeff=0.6064;MQ=64.75;MQ0=1;MQRankSum=1.127;QD=10.36;ReadPosRankSum=-1.328;VQSLOD=2.6588;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:8.93:9,0,65	0/0:5,0:5:12.03:0,12,161	./.	./.	1/1:14,10:26:15.01:330,15,0	1/1:14,0:20:18.06:309,18,0	1/1:14,0:14:14.87:109,15,0	./.	0/0:18,0:18:21.07:0,21,313	0/0:32,0:32:15.02:0,15,139	0/0:21,0:21:5.47:0,5,190	0/0:14,0:14:9.01:0,9,84	0/0:7,0:7:3:0,3,27	1/1:6,3:9:3.01:69,3,0	0/1:9,5:14:33.41:196,0,33	0/0:19,0:19:36.12:0,36,544	1/1:14,16:30:18.06:417,18,0	0/0:9,0:19:14.98:0,15,131	0/0:17,0:16:6.01:0,6,73	0/0:22,0:22:33.05:0,33,400	0/0:12,0:12:15.05:0,15,220	0/0:17,0:17:20.63:0,21,166	0/0:23,0:22:20.77:0,21,200	0/0:14,0:14:6.56:0,7,27	0/1:19,0:19:2.67:3,0,68	1/1:12,10:23:30.10:646,30,0	0/0:26,0:45:38.86:0,39,341	0/0:20,0:20:42.12:0,42,603
chr10	73064330	.	TAGATAGATATAG	T	5123.85	PASS	AB=0.979;AC=16;AF=0.286;AN=56;BaseQRankSum=8.270;DP=492;FS=13.332;HRun=0;HaplotypeScore=174.0626;InbreedingCoeff=0.6703;MQ=61.03;MQ0=8;MQRankSum=-6.488;QD=29.62;ReadPosRankSum=-1.053;VQSLOD=3.0156;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:27.09:903,27,0	0/0:7,0:7:21.07:0,21,813	0/0:7,0:7:16.27:0,16,227	0/1:10,0:6:6.60:7,0,113	0/0:23,0:23:50.20:0,50,1549	0/0:15,0:15:27.09:0,27,784	0/0:15,0:15:36.12:0,36,891	0/0:27,0:24:68.82:0,69,1035	0/0:13,0:13:36.12:0,36,1423	1/1:2,18:20:57.10:1176,57,0	1/1:0,21:21:39.13:1410,39,0	1/1:1,10:11:12.04:447,12,0	1/1:0,10:10:6.01:142,6,0	0/0:9,0:9:18.06:0,18,560	0/0:15,0:15:36.12:0,36,1176	0/0:19,0:19:57.19:0,57,2648	0/0:31,0:30:54.18:0,54,1650	0/0:17,0:17:30.52:0,31,673	0/0:10,0:7:18.02:0,18,491	0/0:22,0:21:60.21:0,60,2414	0/0:13,0:13:30.10:0,30,1158	0/1:21,0:21:1.86:98,0,2	0/1:24,0:23:76.63:85,0,77	0/1:18,0:18:36.04:166,0,36	1/1:1,16:16:18.06:690,18,0	0/0:22,0:22:63.22:0,63,2596	0/0:32,0:32:68.96:0,69,1583	0/0:22,0:22:66.23:0,66,2770
chr10	73064334	.	TAGATATAG	T	4585.93	PASS	AB=0.755;AC=18;AF=0.321;AN=56;BaseQRankSum=9.279;DP=495;FS=8.475;HRun=0;HaplotypeScore=147.3904;InbreedingCoeff=0.8195;MQ=62.13;MQ0=7;MQRankSum=-6.969;QD=26.66;ReadPosRankSum=-0.509;VQSLOD=4.0985;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:27.09:516,27,0	0/0:7,0:7:21.05:0,21,580	0/0:8,0:8:14.08:0,14,226	0/1:15,0:9:6.09:6,0,274	0/0:23,0:23:47.18:0,47,1129	0/0:16,0:16:30.10:0,30,679	0/0:16,0:16:39.05:0,39,615	0/0:28,0:26:63.92:0,64,912	0/0:13,0:13:36.12:0,36,1033	1/1:19,0:19:45.95:793,46,0	1/1:21,0:21:39.13:856,39,0	1/1:10,0:10:12.04:263,12,0	1/1:10,0:10:6.01:96,6,0	0/0:8,0:8:15.05:0,15,371	0/0:15,0:15:39.12:0,39,939	0/0:19,0:19:57.19:0,57,1969	0/0:33,0:32:57.19:0,57,1307	0/0:17,0:17:30.55:0,31,382	0/0:10,0:7:18.01:0,18,332	0/0:23,0:22:60.19:0,60,1771	0/0:13,0:13:30.10:0,30,838	1/1:0,18:18:20.62:610,21,0	0/1:1,23:23:23.80:503,0,24	1/1:12,6:18:30.53:530,31,0	1/1:17,0:16:18.06:413,18,0	0/0:22,0:22:57.18:0,57,1731	0/0:30,0:30:62.83:0,63,781	0/0:22,0:22:66.23:0,66,1900
chr10	73064438	.	T	TTG	780.62	PASS	AB=0.826;AC=18;AF=0.333;AN=54;BaseQRankSum=-5.727;DP=584;FS=17.929;HRun=0;HaplotypeScore=89.6261;InbreedingCoeff=0.3905;MQ=63.35;MQ0=24;MQRankSum=-0.053;QD=3.41;ReadPosRankSum=1.380;VQSLOD=0.7653;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:8.81:84,9,0	1/1:7,0:7:3:25,3,0	./.	0/1:35,0:17:0:0,0,0	0/0:20,0:24:23.58:0,24,214	0/0:17,0:19:17.50:0,17,138	0/0:25,0:25:9.02:0,9,97	1/1:32,0:30:5.99:59,6,0	1/1:7,7:12:9.03:133,9,0	0/0:18,0:18:2.43:0,2,14	0/0:8,0:10:5.68:0,6,28	1/1:10,4:14:6.02:88,6,0	1/1:9,0:9:2.99:23,3,0	0/0:12,0:12:5.88:0,6,64	0/1:14,6:20:20.29:121,0,20	0/0:22,0:26:20.22:0,20,171	0/0:26,0:28:26.54:0,27,225	0/0:7,0:15:19.89:0,20,98	0/0:15,0:13:2.84:0,3,14	0/0:12,0:12:9.02:0,9,97	0/0:42,0:42:2.12:0,2,232	0/1:9,4:13:23.30:80,0,23	1/1:16,6:21:2.73:44,3,0	0/1:30,9:41:66.87:280,0,67	0/0:8,0:13:5.68:0,6,28	0/0:18,0:18:4.70:0,5,53	0/0:23,0:26:23.72:0,24,222	0/0:4,0:5:2.84:0,3,14
chr10	73064720	.	T	TG	5479.91	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=5.717;DP=503;FS=7.611;HRun=2;HaplotypeScore=62.7729;InbreedingCoeff=0.9932;MQ=86.24;MQ0=0;MQRankSum=-2.415;QD=38.86;ReadPosRankSum=3.390;VQSLOD=5.3113;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,46:47:99:1814,126,0	0/0:5,0:5:15.05:0,15,186	0/0:21,0:22:42.01:0,42,567	0/0:11,0:11:27.07:0,27,322	0/0:8,0:8:21.07:0,21,260	0/0:24,0:24:66.21:0,66,814	0/0:29,0:29:84.24:0,84,1017	0/0:26,0:26:60.17:0,60,719	0/0:12,0:12:36.11:0,36,446	0/0:16,0:16:48.15:0,48,595	0/0:13,0:13:30.09:0,30,372	1/1:0,7:7:21.07:302,21,0	1/1:3,8:11:21.07:302,21,0	0/0:16,0:16:48.15:0,48,594	0/0:18,0:18:51.16:0,51,632	0/0:9,0:9:24.06:0,24,285	0/0:36,0:36:99:0,105,1301	1/1:0,18:18:51.17:735,51,0	0/0:9,0:9:23.94:0,24,275	0/0:13,0:13:33.10:0,33,409	0/0:33,0:33:96.29:0,96,1175	1/1:1,9:10:27.09:388,27,0	1/1:0,16:16:39.13:556,39,0	1/1:0,32:32:96.32:1383,96,0	0/0:10,0:10:24.07:0,24,298	0/0:18,0:18:48.15:0,48,595	0/0:22,0:22:57.18:0,57,706	0/0:12,0:12:36.11:0,36,446
chr10	73067262	.	TA	T	443.86	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.498;DP=492;FS=0.000;HRun=11;HaplotypeScore=63.0121;InbreedingCoeff=0.7613;MQ=78.51;MQ0=3;MQRankSum=-2.246;QD=16.44;ReadPosRankSum=0.027;VQSLOD=4.1319;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:67.13:539,67,0	0/0:3,0:3:6.02:0,6,64	0/0:47,1:26:10.74:0,11,228	0/0:32,1:16:10.07:0,10,176	0/0:18,0:18:33.08:0,33,344	0/0:22,0:23:59.09:0,59,672	0/0:14,1:15:8.45:0,8,293	0/0:34,0:34:75.13:0,75,764	0/0:11,0:11:33.08:0,33,349	0/0:19,0:19:45.07:0,45,461	0/0:14,0:14:30.05:0,30,304	0/0:20,0:20:42.04:0,42,423	0/0:8,0:8:23.92:0,24,228	0/0:12,0:12:31.37:0,31,332	0/0:11,0:11:27.07:0,27,286	0/0:10,0:10:26.84:0,27,260	0/0:29,0:29:84.19:0,84,878	0/0:12,0:12:33.08:0,33,350	0/0:14,0:14:25.93:0,26,284	0/0:14,0:15:33.04:0,33,327	0/0:6,0:6:12.03:0,12,127	0/0:10,0:10:20.97:0,21,193	0/0:16,0:16:35.89:0,36,299	0/0:18,0:18:42.11:0,42,443	0/0:15,0:16:41.90:0,42,411	0/0:20,0:20:53.96:0,54,548	0/0:22,0:22:62.96:0,63,634	0/0:7,0:7:18.03:0,18,184
chr10	73067579	.	T	TTGCTGCTGC	1303.95	PASS	AB=1.000;AC=18;AF=0.409;AN=44;BaseQRankSum=1.682;DP=450;FS=1.026;HRun=0;HaplotypeScore=135.4229;InbreedingCoeff=0.6973;MQ=79.39;MQ0=5;MQRankSum=-4.264;QD=8.10;ReadPosRankSum=-0.915;VQSLOD=1.8736;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:2.99:23,3,0	0/0:9,0:9:9.03:0,9,245	0/0:21,0:19:3.01:0,3,71	0/0:32,0:28:9:0,9,129	./.	./.	0/0:30,0:30:39.13:0,39,973	1/1:16,0:16:0.47:1,0,0	0/0:16,0:16:36.08:0,36,919	1/1:11,0:10:0.47:1,0,0	0/1:3,0:3:0:0,0,0	1/1:27,0:27:12.04:353,12,0	1/1:12,0:13:9.03:282,9,0	0/0:16,0:16:33.08:0,33,783	0/0:25,0:25:33.11:0,33,860	0/0:8,0:8:21.07:0,21,572	0/0:29,0:29:51.18:0,51,1361	1/1:11,3:17:15.05:617,15,0	1/1:17,0:16:1.77:5,2,0	0/1:10,0:10:0:0,0,0	0/0:26,0:25:15.05:0,15,351	./.	./.	1/1:25,0:25:8.70:162,9,0	./.	./.	0/0:19,0:20:36.12:0,36,884	0/0:4,0:4:9.03:0,9,245
chr10	73068188	.	T	TG	739.40	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.012;DP=319;FS=1.565;HRun=8;HaplotypeScore=54.1194;InbreedingCoeff=0.9161;MQ=99.50;MQ0=0;MQRankSum=-6.195;QD=16.43;ReadPosRankSum=-1.139;VQSLOD=3.3055;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:39.01:0,39,357	0/0:4,0:4:12.01:0,12,110	0/0:24,0:24:36.55:0,37,412	0/0:16,0:16:10.95:0,11,116	0/0:11,0:11:24.01:0,24,219	0/0:12,0:12:27:0,27,247	0/0:13,0:13:33.01:0,33,302	0/0:11,0:11:23.99:0,24,216	0/0:13,0:13:27.01:0,27,247	0/0:13,0:13:27.01:0,27,247	0/0:10,0:10:26.99:0,27,239	1/1:5,4:9:18.05:207,18,0	1/1:3,3:7:13.25:126,13,0	0/0:7,0:7:14.99:0,15,133	0/0:13,0:13:32.99:0,33,298	0/0:5,0:5:15.01:0,15,137	0/0:18,0:18:42:0,42,383	0/0:9,0:9:26.95:0,27,234	0/0:11,0:11:20.99:0,21,188	0/0:14,0:14:30.01:0,30,274	0/0:21,0:21:36:0,36,328	1/1:3,9:12:27.05:298,27,0	1/1:2,8:10:14.91:172,15,0	1/1:3,4:7:9.03:104,9,0	0/0:12,0:12:30.01:0,30,274	0/0:5,0:5:12.01:0,12,110	0/0:9,0:9:17.98:0,18,160	0/0:2,0:2:6:0,6,55
chr10	73068200	.	C	CA	993.10	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.550;DP=306;FS=2.803;HRun=8;HaplotypeScore=52.1784;InbreedingCoeff=0.9073;MQ=93.26;MQ0=1;MQRankSum=-6.846;QD=14.82;ReadPosRankSum=-2.342;VQSLOD=2.9963;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:21:39.77:202,40,0	0/0:4,0:4:12.01:0,12,110	0/0:21,0:21:24.37:0,24,355	0/0:14,0:13:15.76:0,16,145	0/0:12,0:12:26.99:0,27,243	0/0:14,0:15:32.02:0,32,273	0/0:14,0:14:30:0,30,275	0/0:14,0:14:36.01:0,36,329	0/0:11,0:11:30.01:0,30,274	0/0:12,0:12:17.89:0,18,165	0/0:10,0:10:27.01:0,27,246	1/1:2,8:10:15.04:173,15,0	1/1:5,2:7:17.39:148,17,0	0/0:7,0:7:17.90:0,18,153	0/0:12,0:13:24.01:0,24,241	0/0:6,0:6:12:0,12,110	0/0:18,0:18:47.93:0,48,427	0/0:8,0:8:21.01:0,21,192	0/0:6,0:6:15.01:0,15,137	0/0:9,0:9:21:0,21,192	0/0:14,0:14:27.01:0,27,247	1/1:2,12:14:5.77:316,6,0	1/1:3,5:8:15.04:172,15,0	1/1:1,6:7:14.72:161,15,0	0/0:15,0:15:22.55:0,23,279	0/0:5,0:5:5.99:0,6,55	0/0:8,0:8:20.50:0,20,173	0/0:3,0:3:9:0,9,82
chr10	73070131	.	ATG	A	549.60	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=4.265;DP=701;FS=1.757;HRun=0;HaplotypeScore=115.6020;InbreedingCoeff=0.5823;MQ=67.79;MQ0=2;MQRankSum=-1.409;QD=9.16;ReadPosRankSum=0.964;VQSLOD=3.0749;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,22:28:51.15:642,51,0	0/0:8,0:8:18.04:0,18,277	0/1:32,0:15:8.36:8,0,351	0/0:25,0:15:2.24:0,2,189	0/0:26,0:26:63.20:0,63,1016	0/0:22,0:22:60.21:0,60,1012	0/0:23,0:23:60.21:0,60,1005	0/0:38,0:38:93.30:0,93,1528	0/0:24,0:24:69.24:0,69,1150	0/0:32,0:32:87.30:0,87,1461	0/0:15,0:15:42.14:0,42,706	0/0:33,0:33:69.23:0,69,1142	0/0:18,1:19:51.17:0,51,851	0/0:27,0:27:66.21:0,66,1061	0/0:29,0:29:72.25:0,72,1211	0/0:28,0:28:72.25:0,72,1204	0/0:24,0:24:63.22:0,63,1053	0/0:11,0:11:24.08:0,24,404	0/0:26,1:27:21.58:0,22,890	0/0:21,0:21:60.21:0,60,1012	0/0:46,0:46:99:0,123,2063	0/0:30,1:31:78.25:0,78,1282	0/0:25,1:26:21.58:0,22,918	0/0:17,0:17:33.05:0,33,552	0/0:22,1:23:42.14:0,42,709	0/0:28,0:28:72.25:0,72,1211	0/0:26,0:26:40.03:0,40,1215	0/0:11,0:11:18.03:0,18,251
chr10	73070163	.	GTA	G	4941.50	PASS	AB=0.929;AC=21;AF=0.375;AN=56;BaseQRankSum=16.494;DP=650;FS=6.336;HRun=0;HaplotypeScore=109.3760;InbreedingCoeff=0.7513;MQ=67.46;MQ0=5;MQRankSum=-0.064;QD=17.71;ReadPosRankSum=1.739;VQSLOD=4.8903;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,15:24:27.36:290,27,0	0/0:12,0:12:30.10:0,30,495	0/0:14,0:8:10.28:0,10,143	0/1:18,1:9:25.65:26,0,34	0/0:24,0:24:69.22:0,69,1100	0/0:22,1:23:25.70:0,26,940	0/0:15,1:17:4.63:0,5,583	0/0:44,0:44:81.26:0,81,1292	0/1:18,2:20:26.88:27,0,645	1/1:7,22:29:66.18:784,66,0	1/1:2,20:22:57.18:700,57,0	1/1:5,19:24:38.63:478,39,0	1/1:4,12:16:29.59:368,30,0	0/0:22,0:22:57.19:0,57,938	0/0:27,1:28:35.60:0,36,1076	0/0:22,1:23:22.68:0,23,903	0/0:29,0:28:84.29:0,84,1375	0/0:12,0:12:33.08:0,33,516	0/0:18,0:18:51.15:0,51,793	0/0:25,0:25:63.18:0,63,988	0/0:46,0:46:99:0,111,1822	1/1:7,27:35:59.92:729,60,0	1/1:7,22:29:59.46:719,59,0	1/1:1,11:12:24.08:295,24,0	1/1:4,18:23:42.88:516,43,0	0/1:24,2:26:10.91:11,0,877	0/0:25,0:25:57.19:0,57,938	0/0:9,0:9:27.04:0,27,392
chr10	73070204	.	TATTC	T	288.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.687;DP=695;FS=0.000;HRun=0;HaplotypeScore=150.9798;InbreedingCoeff=0.7968;MQ=63.98;MQ0=0;MQRankSum=-0.469;QD=9.93;ReadPosRankSum=-0.007;VQSLOD=2.8994;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:29:19.34:379,19,0	0/0:11,0:11:30.10:0,30,745	0/0:9,0:7:4.50:0,5,224	0/0:15,0:10:5.98:0,6,260	0/0:31,0:31:93.32:0,93,2401	0/0:32,0:32:90.31:0,90,2274	0/0:16,0:16:48.16:0,48,1148	0/0:40,0:40:99:0,111,2807	0/0:21,0:21:60.21:0,60,1571	0/0:35,0:35:96.33:0,96,2514	0/0:29,0:29:84.29:0,84,2123	0/0:17,0:17:45.14:0,45,1091	0/0:25,0:25:63.22:0,63,1624	0/0:26,0:26:78.24:0,78,1920	0/0:30,0:30:78.27:0,78,1928	0/0:25,0:25:66.23:0,66,1710	0/0:24,0:23:63.20:0,63,1576	0/0:14,0:14:36.12:0,36,943	0/0:16,0:16:42.14:0,42,1042	0/0:30,0:30:87.28:0,87,2130	0/0:37,0:37:99:0,105,2668	0/0:39,0:39:99:0,103,2495	0/0:31,0:31:78.25:0,78,1939	0/0:13,0:13:33.07:0,33,777	0/0:31,0:31:72.25:0,72,1844	0/0:36,0:36:99:0,108,2789	0/0:20,0:20:60.21:0,60,1567	0/0:13,0:13:39.13:0,39,999
chr10	73071001	.	A	AACACAC	1217.54	PASS	AB=0.814;AC=14;AF=0.250;AN=56;BaseQRankSum=3.123;DP=679;FS=2.149;HRun=0;HaplotypeScore=166.5883;InbreedingCoeff=0.5825;MQ=67.20;MQ0=12;MQRankSum=1.130;QD=5.07;ReadPosRankSum=-2.284;VQSLOD=2.5424;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,12:46:11.11:203,11,0	0/0:8,0:10:24.08:0,24,435	0/0:38,0:19:3.01:0,3,30	0/1:35,0:20:1.22:1,0,8	0/0:24,0:26:46.02:0,46,841	0/0:13,0:16:8.42:0,8,286	0/1:25,0:29:5.56:6,0,586	0/0:22,0:21:24.05:0,24,340	0/0:16,0:22:40:0,40,651	0/0:12,0:32:39.56:0,40,524	0/0:8,0:19:12.04:0,12,168	0/1:10,0:22:45.82:180,0,46	1/1:10,0:21:9.03:115,9,0	0/0:18,0:19:24.06:0,24,400	0/0:23,0:23:53.95:0,54,933	0/0:12,0:15:27.09:0,27,465	0/0:34,0:39:81.27:0,81,1471	1/1:10,0:15:8.17:157,8,0	0/0:10,0:11:12.04:0,12,200	0/0:21,0:23:57.17:0,57,1011	0/0:40,0:42:11.17:0,11,789	1/1:7,0:20:14.18:200,14,0	1/1:7,0:20:26.30:318,26,0	0/1:11,0:31:19.54:209,0,20	0/0:5,0:16:15.05:0,15,209	0/0:22,0:24:23.89:0,24,441	0/0:21,0:23:48.13:0,48,888	0/0:13,0:14:22.41:0,22,381
chr10	73071152	.	GT	G	271.94	PASS	AB=0.916;AC=4;AF=0.071;AN=56;BaseQRankSum=4.055;DP=522;FS=6.188;HRun=10;HaplotypeScore=52.6812;InbreedingCoeff=0.5445;MQ=73.24;MQ0=0;MQRankSum=0.663;QD=7.16;ReadPosRankSum=-0.143;VQSLOD=1.0259;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.20:0,87,943	0/1:8,1:10:2.16:2,0,189	0/0:22,0:20:26.29:0,26,309	0/1:11,1:12:8.04:8,0,125	0/0:21,0:23:38.57:0,39,546	0/0:14,0:14:38.13:0,38,405	0/0:15,0:16:44.94:0,45,471	0/0:27,0:28:34.21:0,34,564	0/0:20,0:20:54.14:0,54,587	0/0:23,0:23:60.15:0,60,652	0/0:17,0:17:48.11:0,48,521	0/0:13,0:13:30.08:0,30,332	0/0:21,0:21:54.15:0,54,596	0/0:12,0:13:35.92:0,36,370	0/0:18,0:18:48.13:0,48,531	0/0:12,0:12:36.10:0,36,398	0/0:22,0:22:60.16:0,60,664	1/1:0,16:16:41.99:365,42,0	0/0:22,0:22:60.15:0,60,655	0/0:20,0:20:51.09:0,51,543	0/0:16,0:17:44.95:0,45,479	0/0:14,0:14:42.10:0,42,456	0/0:18,0:18:54.14:0,54,587	0/0:20,0:20:51.14:0,51,564	0/0:14,0:14:42.09:0,42,449	0/0:22,0:22:60.14:0,60,652	0/0:25,0:26:69.02:0,69,744	0/0:17,0:17:45.07:0,45,483
chr10	73071642	.	TGA	T	420.24	PASS	AB=0.939;AC=29;AF=0.690;AN=42;BaseQRankSum=6.072;DP=603;FS=2.326;HRun=0;HaplotypeScore=98.8279;InbreedingCoeff=0.3570;MQ=70.86;MQ0=8;MQRankSum=2.054;QD=1.18;ReadPosRankSum=0.826;VQSLOD=1.6540;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:35:2.84:14,3,0	./.	./.	./.	0/0:20,0:20:8.82:0,9,130	0/1:10,0:11:5.13:5,0,60	1/1:17,0:21:5.68:28,6,0	0/0:26,0:25:6.84:0,7,45	0/0:17,0:17:9:0,9,110	1/1:27,0:32:5.27:27,5,0	1/1:12,0:21:0.62:2,1,0	1/1:16,8:26:17.71:156,18,0	1/1:15,0:18:5.68:28,6,0	0/0:23,3:26:6.88:0,7,106	0/1:24,3:27:31.49:31,0,157	0/0:20,0:20:12.01:0,12,153	0/1:27,0:27:7.84:8,0,241	1/1:11,3:14:8.86:78,9,0	./.	./.	./.	1/1:17,0:19:2.84:14,3,0	./.	1/1:19,0:22:5.48:28,5,0	1/1:12,0:21:2.84:14,3,0	1/1:22,3:24:6.01:64,6,0	1/1:14,4:18:3.01:32,3,0	1/1:14,2:16:3.01:32,3,0
chr10	73071884	.	G	GGTGTGTGT	3475.78	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=1.967;DP=968;FS=0.606;HRun=0;HaplotypeScore=241.4820;InbreedingCoeff=0.8774;MQ=58.87;MQ0=15;MQRankSum=-5.635;QD=11.10;ReadPosRankSum=-2.776;VQSLOD=2.1308;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:46:3.01:85,3,0	0/0:10,0:10:23.91:0,24,433	0/0:43,0:15:8.93:0,9,120	0/0:47,0:25:18.91:0,19,356	0/0:18,0:20:30.10:0,30,705	0/0:24,0:26:45.06:0,45,987	0/0:30,0:32:45.24:0,45,1005	0/0:30,0:30:27.06:0,27,425	0/0:37,0:39:77.81:0,78,1758	1/1:15,0:34:28.27:511,28,0	1/1:4,1:17:6.02:209,6,0	1/1:13,16:33:9.03:349,9,0	1/1:5,14:23:9.03:371,9,0	0/0:37,0:38:75.25:0,75,1800	0/0:38,0:38:83.89:0,84,1989	0/0:32,0:35:75.54:0,76,1614	0/0:38,0:45:59.16:0,59,1694	1/1:11,0:29:5.20:194,5,0	0/0:26,0:26:35.08:0,35,617	0/0:17,0:19:39.01:0,39,715	0/0:121,0:124:99:0,128,4192	1/1:8,12:29:18.06:682,18,0	1/1:5,11:22:12.01:495,12,0	1/1:23,21:53:8.21:371,8,0	1/1:7,0:20:6.02:209,6,0	0/0:33,0:33:65.79:0,66,1346	0/0:22,0:23:51.17:0,51,1184	0/0:24,0:25:47.92:0,48,935
chr10	73073233	.	GGA	G	1507.26	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.438;DP=450;FS=0.483;HRun=0;HaplotypeScore=84.9210;InbreedingCoeff=0.9616;MQ=76.38;MQ0=2;MQRankSum=-6.826;QD=19.83;ReadPosRankSum=-1.695;VQSLOD=2.8561;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:19.28:153,19,0	0/0:9,0:9:25.79:0,26,371	0/0:27,0:22:26.40:0,26,365	0/0:14,1:10:15.85:0,16,118	0/0:27,0:27:81.26:0,81,1245	0/0:20,0:20:53.95:0,54,860	0/0:17,0:17:51.09:0,51,746	0/0:20,0:20:57.11:0,57,802	0/0:12,0:12:36.10:0,36,565	0/0:17,0:17:40.93:0,41,727	0/0:18,0:18:54.15:0,54,836	1/1:6,2:8:19.52:184,20,0	1/1:7,3:10:24.42:241,24,0	0/0:16,0:16:45.13:0,45,722	0/0:16,0:16:48.14:0,48,741	0/0:19,0:19:54.12:0,54,831	0/0:20,0:20:56:0,56,788	0/0:19,0:19:3.84:0,4,223	0/0:13,0:13:38.86:0,39,571	0/0:13,0:13:39.12:0,39,597	0/0:9,0:9:27.08:0,27,431	1/1:15,5:20:50.84:484,51,0	1/1:13,4:17:50.56:484,51,0	1/1:10,1:11:20.29:148,20,0	0/0:15,0:15:42.13:0,42,657	0/0:26,0:26:78.24:0,78,1252	0/0:18,0:18:48.14:0,48,754	0/0:7,0:7:21.07:0,21,326
chr10	73073234	.	GA	G	1895.75	PASS	AB=0.882;AC=13;AF=0.232;AN=56;BaseQRankSum=10.395;DP=452;FS=1.536;HRun=1;HaplotypeScore=75.2396;InbreedingCoeff=0.8905;MQ=77.18;MQ0=2;MQRankSum=-6.317;QD=20.61;ReadPosRankSum=-2.137;VQSLOD=3.2418;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,4:10:26.72:256,27,0	0/0:9,0:9:25.78:0,26,290	0/0:25,1:21:34.47:0,34,306	0/1:13,2:10:16.89:17,0,65	0/0:27,0:27:80.66:0,81,911	0/0:19,0:19:49.62:0,50,638	0/0:17,0:17:51.04:0,51,575	0/0:21,0:21:60.09:0,60,676	0/0:12,0:12:35.89:0,36,424	0/0:16,1:17:10.01:0,10,538	0/0:18,0:18:53.94:0,54,655	1/1:4,5:9:24.02:248,24,0	1/1:5,5:10:24.49:247,24,0	0/0:15,0:15:45.13:0,45,561	0/0:16,0:16:48.11:0,48,581	0/0:19,0:19:48.43:0,48,639	0/0:20,0:20:51.73:0,52,571	0/0:19,0:19:39.64:0,40,405	0/0:14,0:14:28.88:0,29,440	0/0:13,0:13:38.95:0,39,438	0/0:9,0:9:27.08:0,27,341	1/1:7,13:20:51.11:560,51,0	1/1:6,11:17:51.01:518,51,0	1/1:3,8:11:21.05:241,21,0	0/0:15,0:15:42.09:0,42,499	0/0:26,0:26:77.83:0,78,961	0/0:17,0:17:47.71:0,48,544	0/0:10,0:10:26.96:0,27,283
chr10	73073426	.	T	TGAGAGA	1686.80	PASS	AB=1.000;AC=19;AF=0.365;AN=52;BaseQRankSum=3.963;DP=506;FS=17.769;HRun=0;HaplotypeScore=135.0188;InbreedingCoeff=0.5876;MQ=62.43;MQ0=9;MQRankSum=-2.081;QD=8.23;ReadPosRankSum=-3.361;VQSLOD=0.1947;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:34:4.70:0,5,128	0/0:8,0:8:14.13:0,14,186	0/1:18,0:11:0:0,0,0	./.	0/0:8,0:9:2.98:0,3,42	0/0:15,0:15:17.79:0,18,232	0/0:19,0:19:28.82:0,29,443	0/0:26,0:26:2.97:0,3,21	0/0:17,0:17:14.94:0,15,241	1/1:20,0:20:29.05:432,29,0	./.	1/1:9,9:21:8.04:174,8,0	1/1:18,0:17:14.05:179,14,0	0/0:15,0:15:16.63:0,17,333	0/0:17,0:17:26.57:0,27,428	0/0:17,0:17:26.88:0,27,483	0/0:14,0:14:5.13:0,5,364	1/1:14,0:12:21.05:336,21,0	0/0:21,0:20:6.02:0,6,100	0/0:12,0:14:2.09:0,2,81	0/1:24,0:24:31.30:31,0,92	1/1:8,1:14:5.90:77,6,0	1/1:17,0:17:18.05:313,18,0	1/1:20,0:20:9.03:178,9,0	1/1:6,0:14:6.02:97,6,0	0/1:25,0:25:47.25:47,0,55	0/0:16,0:17:21.07:0,21,363	0/0:15,0:15:5.88:0,6,113
chr10	73074803	.	GGAGA	G	102.28	PASS	AB=0.729;AC=1;AF=0.020;AN=50;BaseQRankSum=1.482;DP=470;FS=2.397;HRun=0;HaplotypeScore=81.6087;InbreedingCoeff=0.1960;MQ=58.34;MQ0=25;MQRankSum=1.232;QD=2.01;ReadPosRankSum=1.708;VQSLOD=1.6919;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:32,19:51:7.82:176,0,8	0/0:4,0:5:11.77:0,12,192	./.	./.	0/0:12,0:12:12.04:0,12,279	0/0:7,0:7:9.03:0,9,215	0/0:16,0:18:32.85:0,33,704	0/0:22,0:19:23.71:0,24,292	0/0:20,0:20:23.82:0,24,439	0/0:13,0:12:18.06:0,18,263	0/0:12,0:11:6.01:0,6,69	0/0:10,0:9:3.01:0,3,52	0/0:15,0:15:15.02:0,15,225	0/0:15,0:14:12.04:0,12,241	0/0:21,0:18:29.84:0,30,657	0/0:12,0:12:21.07:0,21,501	0/0:18,0:18:28.87:0,29,598	0/0:14,0:17:38.54:0,39,823	0/0:15,0:17:19.52:0,20,267	0/0:9,0:7:11.99:0,12,181	0/0:23,0:27:32.83:0,33,625	0/0:12,0:11:3.01:0,3,51	./.	0/0:20,0:20:9.03:0,9,144	0/0:13,0:13:0.47:0,0,1	0/0:18,0:18:19.31:0,19,404	0/0:10,0:10:14.91:0,15,203	0/0:13,0:9:24.03:0,24,481
chr10	73074829	.	A	AGAGAGAGAGAGAGAGG	2170.16	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=2.060;DP=420;FS=2.873;HRun=0;HaplotypeScore=158.6319;InbreedingCoeff=0.6101;MQ=56.95;MQ0=20;MQRankSum=-4.454;QD=21.28;ReadPosRankSum=-0.600;VQSLOD=2.5346;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:48.01:0,48,786	0/0:4,0:4:8.94:0,9,389	0/0:11,0:8:21.06:0,21,237	0/0:19,0:5:6.41:0,6,77	0/0:10,0:10:24.02:0,24,492	0/0:12,0:12:24.01:0,24,500	0/0:22,0:21:38.75:0,39,1229	0/0:28,0:26:60.03:0,60,757	0/0:13,0:13:16.63:0,17,780	0/1:10,0:10:96.65:184,0,97	0/1:11,0:10:18.01:19,0,18	1/1:6,6:13:6.49:372,6,0	1/1:12,0:12:26.69:611,27,0	0/0:11,0:10:21.04:0,21,471	0/0:18,0:15:39.09:0,39,1293	0/0:8,0:8:21.07:0,21,879	0/0:19,0:19:45.07:0,45,1148	0/1:21,0:20:99:112,0,1276	0/0:18,0:18:27.20:0,27,575	0/0:8,0:6:8.92:0,9,222	0/0:30,0:29:44.69:0,45,988	1/1:10,0:9:9.01:145,9,0	1/1:8,0:7:9.49:65,9,0	1/1:16,0:16:23.62:834,24,0	0/0:11,0:11:11.48:0,11,95	0/0:14,0:13:29.71:0,30,761	0/0:10,0:10:21.02:0,21,494	0/0:13,0:9:24.04:0,24,759
chr10	73075060	.	TTCTCTCTCTCTC	T	921.45	PASS	AB=0.874;AC=7;AF=0.152;AN=46;BaseQRankSum=4.562;DP=418;FS=6.808;HRun=0;HaplotypeScore=134.5698;InbreedingCoeff=0.3361;MQ=70.79;MQ0=25;MQRankSum=-1.399;QD=14.40;ReadPosRankSum=1.866;VQSLOD=2.2306;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:35.74:0,36,824	./.	0/0:26,0:17:2.92:0,3,17	0/0:34,0:23:1.55:0,2,4	0/0:12,0:12:3.01:0,3,129	0/0:15,0:14:9.03:0,9,426	0/0:10,0:7:12.02:0,12,414	0/0:18,0:18:9:0,9,169	0/0:9,0:7:14.89:0,15,261	0/1:7,4:11:12.87:315,0,13	./.	1/1:5,4:10:0.22:92,0,0	1/1:0,4:6:15.05:449,15,0	0/0:11,0:10:15.05:0,15,631	0/0:9,0:9:9.03:0,9,435	0/0:13,0:13:15.05:0,15,636	0/0:26,0:26:33.11:0,33,1252	0/0:28,0:26:24.07:0,24,782	0/0:22,0:22:21.96:0,22,911	./.	0/0:21,0:20:21.07:0,21,670	./.	./.	0/1:23,0:18:65.92:66,0,94	0/1:12,1:13:2.95:120,0,3	0/0:14,0:12:24.08:0,24,1006	0/0:11,0:10:18.03:0,18,586	0/0:12,0:12:9.03:0,9,277
chr10	73075502	.	C	CT	890.39	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.808;DP=697;FS=0.824;HRun=0;HaplotypeScore=65.5163;InbreedingCoeff=0.9831;MQ=86.77;MQ0=0;MQRankSum=-3.005;QD=42.40;ReadPosRankSum=1.898;VQSLOD=4.2908;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,1709	0/0:11,0:11:33.11:0,33,460	0/0:26,0:26:68.72:0,69,895	0/0:23,0:23:69.09:0,69,814	0/0:23,0:23:69.11:0,69,882	0/0:24,0:24:72.23:0,72,987	0/0:37,0:37:99:0,105,1397	0/0:33,0:33:90.28:0,90,1228	0/0:23,0:23:69.22:0,69,947	0/0:32,0:32:96.30:0,96,1290	0/0:17,0:17:48.13:0,48,634	0/0:26,0:26:78.22:0,78,1039	0/0:21,0:21:57.17:0,57,776	0/0:25,0:25:75.24:0,75,1030	0/0:26,0:26:75.24:0,75,1024	0/0:21,0:21:63.18:0,63,843	0/0:26,0:26:78.23:0,78,1054	1/1:0,21:20:63.21:985,63,0	0/0:27,0:27:81.10:0,81,1104	0/0:16,0:16:48.15:0,48,653	0/0:38,0:38:99:0,111,1511	0/0:22,0:22:63.19:0,63,848	0/0:22,0:22:66.19:0,66,885	0/0:30,0:30:81.21:0,81,1091	0/0:10,0:10:27.09:0,27,377	0/0:32,0:32:93.28:0,93,1249	0/0:37,0:36:99:0,111,1417	0/0:5,0:5:15.01:0,15,171
chr10	73076165	.	AAAAAAGAAAGAAAG	A	497.09	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.234;DP=488;FS=3.701;HRun=0;HaplotypeScore=173.9120;InbreedingCoeff=0.7027;MQ=46.55;MQ0=12;MQRankSum=-2.951;QD=22.60;ReadPosRankSum=1.457;VQSLOD=2.4660;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:87.52:0,88,1899	0/0:9,0:8:24.08:0,24,1259	0/0:5,0:3:7.84:0,8,176	0/0:4,0:2:6:0,6,142	0/0:11,0:11:24.03:0,24,1180	0/0:27,0:25:50.99:0,51,1896	0/0:21,0:20:51.12:0,51,2242	0/0:33,0:33:87.07:0,87,3466	0/0:20,0:20:54.44:0,54,1983	0/0:13,0:13:36.03:0,36,886	0/0:7,0:7:15.93:0,16,342	0/0:26,0:25:65.98:0,66,1993	0/0:9,0:9:21.49:0,21,577	0/0:25,0:25:71.04:0,71,2902	0/0:21,0:21:53.88:0,54,1956	0/0:21,0:21:47.84:0,48,2206	0/0:22,0:21:45.03:0,45,2414	1/1:4,18:21:17.53:587,18,0	0/0:28,0:26:69.49:0,69,2190	0/0:11,0:11:33.06:0,33,1509	0/0:15,0:14:29.29:0,29,1208	0/0:5,0:5:15.05:0,15,488	0/0:10,0:9:15.05:0,15,550	0/0:17,0:14:9.40:0,9,161	0/0:11,0:11:20.97:0,21,577	0/0:27,0:27:66.14:0,66,2820	0/0:24,0:24:60.05:0,60,2337	0/0:6,0:2:5.97:0,6,220
chr10	73076167	.	AAAAG	A	826.49	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=3.314;DP=495;FS=25.569;HRun=0;HaplotypeScore=89.4134;InbreedingCoeff=0.8034;MQ=47.31;MQ0=10;MQRankSum=-0.531;QD=6.21;ReadPosRankSum=-1.975;VQSLOD=0.2972;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,4:37:36.09:280,36,0	0/0:9,0:8:23.98:0,24,383	0/0:5,0:3:8.36:0,8,56	0/0:7,0:5:14.58:0,15,110	0/0:11,0:11:18.06:0,18,386	0/0:25,0:23:26.94:0,27,448	0/0:21,0:20:35.87:0,36,534	0/0:32,0:32:52.20:0,52,657	0/0:20,0:20:24.07:0,24,501	1/1:13,0:13:12.04:109,12,0	0/1:7,0:7:7.66:25,0,8	1/1:27,0:26:42.48:321,42,0	1/1:10,0:10:10.06:49,10,0	0/0:25,0:25:45.06:0,45,763	0/0:23,0:23:29.98:0,30,495	0/0:22,0:22:36.04:0,36,681	0/0:22,0:21:39.12:0,39,746	1/1:22,0:21:14.65:126,15,0	0/0:29,0:27:42.02:0,42,578	0/0:11,0:11:24.05:0,24,383	0/0:16,0:15:21.52:0,22,352	1/1:6,0:6:8.70:50,9,0	1/1:10,0:9:8.69:50,9,0	0/0:18,0:15:0:0,0,0	0/0:11,0:11:0.94:0,1,1	0/0:27,0:27:50.81:0,51,668	0/0:23,0:23:39.07:0,39,634	0/0:5,0:3:6:0,6,91
chr10	73076168	.	AAAG	A	1610.67	PASS	AB=0.794;AC=18;AF=0.321;AN=56;BaseQRankSum=3.583;DP=490;FS=14.770;HRun=0;HaplotypeScore=77.9313;InbreedingCoeff=0.7541;MQ=48.96;MQ0=10;MQRankSum=-1.682;QD=9.94;ReadPosRankSum=-1.928;VQSLOD=1.1377;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:37:18.29:260,0,18	0/0:9,0:8:23.98:0,24,334	0/0:5,0:3:8.01:0,8,45	0/0:8,0:6:10.73:0,11,98	0/0:11,0:11:20.96:0,21,333	0/0:25,0:23:9.77:0,10,370	0/0:21,0:20:45.27:0,45,487	0/0:31,0:31:51.75:0,52,638	0/0:20,0:20:37.64:0,38,494	1/1:4,9:13:29.64:238,30,0	1/1:8,0:8:5.67:59,6,0	1/1:24,4:27:65.47:616,65,0	1/1:9,1:10:23.84:201,24,0	0/0:25,0:25:60.08:0,60,691	0/0:23,0:23:40.75:0,41,476	0/0:21,0:21:41.26:0,41,586	0/0:22,0:21:38.39:0,38,602	1/1:22,0:21:14.67:107,15,0	0/0:29,0:27:56.88:0,57,573	0/0:11,0:11:29.87:0,30,381	0/0:15,0:14:26.56:0,27,324	1/1:5,1:6:11.83:114,12,0	0/1:3,7:9:5.99:112,0,6	1/1:7,10:15:2.89:25,3,0	1/1:10,0:10:13.40:74,13,0	0/0:25,0:25:43.92:0,44,609	0/0:22,0:22:46.39:0,46,570	0/0:5,0:3:5.97:0,6,79
chr10	73076169	.	AAG	A	1426.20	PASS	AB=0.858;AC=18;AF=0.321;AN=56;BaseQRankSum=5.613;DP=478;FS=16.804;HRun=0;HaplotypeScore=69.2527;InbreedingCoeff=0.6842;MQ=49.58;MQ0=9;MQRankSum=-1.229;QD=8.86;ReadPosRankSum=-1.879;VQSLOD=1.5745;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:35:44.60:249,0,45	0/0:9,0:8:23.98:0,24,275	0/1:5,0:3:0.25:0,0,20	0/0:8,0:6:10.40:0,10,81	0/0:10,0:10:20.99:0,21,268	0/0:24,0:22:19.31:0,19,306	0/0:20,0:19:31.95:0,32,419	0/0:31,0:31:62.35:0,62,572	0/0:19,0:19:40.23:0,40,442	1/1:11,2:13:28.59:211,29,0	0/1:1,7:8:4.46:61,0,4	1/1:23,4:26:62.01:503,62,0	1/1:10,0:10:23.20:168,23,0	0/0:25,0:25:54.84:0,55,560	0/0:21,0:21:26.80:0,27,393	0/0:20,0:20:40.93:0,41,481	0/0:22,0:21:33.50:0,33,470	1/1:21,0:20:14.59:89,15,0	0/0:27,0:25:40.92:0,41,514	0/0:11,0:11:29.65:0,30,319	0/0:15,0:14:25.13:0,25,275	1/1:2,4:6:11.98:117,12,0	0/1:8,1:9:11.72:62,0,12	1/1:17,0:15:3.26:10,3,0	1/1:3,6:9:14.40:146,14,0	0/0:26,0:26:47.70:0,48,542	0/0:22,0:22:46.84:0,47,475	0/0:7,0:5:11.93:0,12,113
chr10	73076701	.	C	CACATGA	2921.57	PASS	AB=0.954;AC=43;AF=0.768;AN=56;BaseQRankSum=-7.462;DP=346;FS=21.279;HRun=0;HaplotypeScore=97.3962;InbreedingCoeff=-0.2659;MQ=64.75;MQ0=0;MQRankSum=0.760;QD=8.44;ReadPosRankSum=-2.715;VQSLOD=-0.5410;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:20.81:200,21,0	1/1:8,0:8:20.35:135,20,0	0/1:2,1:5:11.93:19,0,12	0/1:6,0:6:45.36:105,0,45	1/1:23,0:23:15.95:128,16,0	1/1:16,0:16:12.42:197,12,0	0/1:18,0:18:5.13:26,0,5	1/1:18,0:18:16.70:230,17,0	1/1:15,0:15:19.11:153,19,0	0/1:17,0:17:12.98:167,0,13	1/1:7,0:7:11.41:66,11,0	1/1:10,0:10:15.73:121,16,0	1/1:7,0:7:5.58:34,6,0	1/1:11,0:11:6.22:115,6,0	0/1:7,0:7:7.74:11,0,8	0/1:7,0:7:6.60:105,0,7	0/1:7,0:7:0.09:66,0,0	0/1:10,0:10:10.22:33,0,10	0/1:12,0:12:0.97:117,0,1	0/1:17,0:17:5.40:86,0,5	1/1:12,0:12:10.11:149,10,0	0/1:21,0:21:15.75:173,0,16	1/1:14,0:14:14.34:122,14,0	1/1:14,0:14:14.88:146,15,0	1/1:13,0:13:3.65:119,4,0	1/1:13,0:13:5.22:159,5,0	0/1:18,0:18:9.68:55,0,10	0/1:4,0:4:13.97:22,0,14
chr10	73078265	.	TACACACACACACACAC	T	2473.94	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.920;DP=637;FS=7.475;HRun=0;HaplotypeScore=248.8958;InbreedingCoeff=0.8392;MQ=64.33;MQ0=5;MQRankSum=-6.543;QD=18.89;ReadPosRankSum=2.180;VQSLOD=1.5634;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:38:36.11:0,36,1761	0/0:7,0:7:15.05:0,15,978	0/0:25,0:17:6.02:0,6,259	0/0:25,0:17:3.01:0,3,135	0/0:12,0:12:27.09:0,27,1693	0/0:18,0:20:42.13:0,42,2437	0/0:31,0:31:57.17:0,57,3114	0/0:17,0:17:42.14:0,42,2295	0/0:26,0:25:57.20:0,57,3269	0/0:21,0:21:42.14:0,42,2179	0/0:14,0:14:20.48:0,20,1237	1/1:7,21:30:38.80:1618,39,0	1/1:14,8:23:5.18:243,5,0	0/0:20,0:20:39.13:0,39,2706	0/0:22,0:23:42.07:0,42,2680	0/0:18,0:19:39.12:0,39,2150	0/0:29,0:31:70.09:0,70,3924	0/0:17,0:17:36.09:0,36,1362	0/0:12,0:14:24.06:0,24,915	0/0:19,0:19:27.09:0,27,1216	0/0:46,0:51:99:0,105,6393	1/1:10,7:17:9.50:332,10,0	1/1:8,9:17:9.03:212,9,0	1/1:25,19:42:5.20:221,5,0	0/0:23,0:23:45.63:0,46,2732	0/0:16,0:21:48.16:0,48,2935	0/0:20,0:21:51.18:0,51,3218	0/0:3,0:7:12.04:0,12,805
chr10	73078305	.	CCG	C	1399.20	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=5.612;DP=681;FS=25.780;HRun=0;HaplotypeScore=112.4895;InbreedingCoeff=0.7047;MQ=64.37;MQ0=5;MQRankSum=0.275;QD=12.27;ReadPosRankSum=-2.333;VQSLOD=1.1691;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:10.15:0,10,889	0/0:14,0:14:36.57:0,37,543	0/0:24,0:11:26.24:0,26,363	0/1:31,0:20:8.96:9,0,506	0/0:12,0:12:31.02:0,31,564	0/0:20,0:20:50.80:0,51,769	0/0:35,0:35:99:0,102,1648	0/0:32,0:32:82.29:0,82,1280	0/0:30,0:30:80.91:0,81,1253	1/1:19,1:21:51.06:638,51,0	1/1:11,1:14:32.46:362,32,0	0/0:35,0:35:70.89:0,71,719	0/0:16,0:16:25.87:0,26,315	0/0:17,0:17:48.16:0,48,828	0/0:23,0:23:61.85:0,62,963	0/0:17,0:17:44.89:0,45,742	0/0:33,0:33:81.56:0,82,1371	0/0:16,0:16:15.08:0,15,397	0/0:17,0:16:44.89:0,45,556	0/0:11,0:11:30.07:0,30,425	0/0:81,0:79:99:0,191,2947	0/0:12,0:12:17.97:0,18,235	0/0:15,0:15:27.08:0,27,355	0/0:32,0:32:27.24:0,27,360	1/1:19,2:24:48.16:515,48,0	0/1:24,0:24:28.26:28,0,748	0/0:27,0:27:74.27:0,74,1168	0/0:14,0:14:33.11:0,33,489
chr10	73078372	.	CT	C	653.09	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.312;DP=786;FS=0.000;HRun=1;HaplotypeScore=86.0232;InbreedingCoeff=0.9996;MQ=88.89;MQ0=0;MQRankSum=-0.511;QD=32.65;ReadPosRankSum=3.437;VQSLOD=3.4007;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:99:0,114,1755	0/0:18,0:18:54.16:0,54,825	0/0:29,1:30:82.81:0,83,1313	0/0:32,0:32:90.03:0,90,1319	0/0:16,0:16:48.16:0,48,767	0/0:25,0:25:72.25:0,72,1150	0/0:33,0:33:99:0,99,1562	0/0:35,0:35:99:0,105,1595	0/0:34,0:34:99:0,99,1557	0/0:30,0:30:90.31:0,90,1439	0/0:18,0:18:51.16:0,51,790	0/0:39,0:39:99:0,108,1725	0/0:23,0:23:69.22:0,69,1075	0/0:32,0:32:96.33:0,96,1526	0/0:25,0:25:75.24:0,75,1171	0/0:27,0:27:78.23:0,78,1220	0/0:29,1:30:48.37:0,48,1340	1/1:0,20:20:54.18:748,54,0	0/0:23,0:23:63.21:0,63,1003	0/0:11,0:11:33.11:0,33,527	0/0:82,0:82:99:0,244,3865	0/0:15,0:15:45.15:0,45,720	0/0:25,0:25:69.22:0,69,1080	0/0:42,0:41:87.30:0,87,1389	0/0:15,0:15:45.14:0,45,696	0/0:27,0:27:81.28:0,81,1283	0/0:26,0:25:78.22:0,78,1216	0/0:12,0:12:36.12:0,36,572
chr10	73080412	.	GGT	G	1534.75	PASS	AB=0.926;AC=10;AF=0.179;AN=56;BaseQRankSum=10.179;DP=846;FS=2.112;HRun=0;HaplotypeScore=101.1873;InbreedingCoeff=0.5111;MQ=65.90;MQ0=7;MQRankSum=0.738;QD=8.87;ReadPosRankSum=0.983;VQSLOD=3.3768;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,102,1611	0/1:13,1:14:3.82:4,0,449	0/0:44,1:25:7.78:0,8,472	0/0:44,0:23:33.80:0,34,467	0/0:14,0:14:36.12:0,36,582	0/0:27,0:28:49.07:0,49,962	0/0:34,1:35:47.55:0,48,1275	0/0:36,1:37:32.29:0,32,1029	0/0:24,1:25:26.28:0,26,942	1/1:6,21:28:62.99:726,63,0	1/1:3,5:8:15.05:185,15,0	0/0:32,1:33:41.33:0,41,1164	0/0:23,1:24:29.28:0,29,985	0/0:22,0:22:57.19:0,57,927	0/1:32,3:35:8.48:8,0,1377	0/0:26,0:27:58.10:0,58,1108	0/1:30,3:33:30.34:30,0,1018	0/0:28,0:28:60.20:0,60,964	0/0:24,1:26:9.06:0,9,763	0/0:22,0:22:57.19:0,57,919	0/0:92,1:93:99:0,207,3779	0/0:28,1:29:23.25:0,23,862	0/0:17,1:18:2.19:0,2,544	0/0:22,0:24:57.19:0,57,907	1/1:5,21:28:62.86:730,63,0	0/0:26,1:27:33.54:0,34,1038	0/1:25,2:26:4.63:5,0,955	0/0:29,0:29:75.26:0,75,1215
chr10	73081827	.	TGAG	T	2001.52	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.523;DP=762;FS=0.000;HRun=0;HaplotypeScore=119.4613;InbreedingCoeff=0.9960;MQ=82.73;MQ0=0;MQRankSum=-5.089;QD=44.48;ReadPosRankSum=3.208;VQSLOD=5.2859;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:45:99:2096,123,0	0/0:16,0:16:48.16:0,48,1087	0/0:27,0:27:75.26:0,75,1579	0/0:26,0:26:77.07:0,77,1642	0/0:18,0:18:54.19:0,54,1246	0/0:26,0:26:69.19:0,69,1541	0/0:46,0:46:99:0,135,3076	0/0:23,0:23:66.20:0,66,1392	0/0:30,0:30:90.31:0,90,2052	0/0:32,0:32:87.30:0,87,2004	0/0:23,0:23:69.24:0,69,1590	0/0:33,0:33:96.33:0,96,2190	0/0:26,0:26:75.24:0,75,1649	0/0:32,0:32:93.02:0,93,2143	0/0:29,0:29:87.30:0,87,1970	0/0:20,0:20:60.21:0,60,1377	0/0:35,0:35:99:0,105,2393	0/0:19,0:19:57.20:0,57,1289	0/0:23,0:23:66.18:0,66,1468	0/0:20,0:20:60.19:0,60,1339	0/0:48,0:48:99:0,144,3320	0/0:26,0:26:78.25:0,78,1729	0/0:24,0:24:66.20:0,66,1474	0/0:34,0:34:99:0,102,2341	0/0:21,0:21:63.22:0,63,1452	0/0:28,0:28:81.27:0,81,1820	0/0:25,0:25:75.26:0,75,1676	0/0:7,0:7:21.07:0,21,484
chr10	73083173	.	AAT	A	643.25	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.275;DP=394;FS=2.141;HRun=0;HaplotypeScore=47.6333;InbreedingCoeff=0.8433;MQ=71.50;MQ0=1;MQRankSum=-0.852;QD=25.73;ReadPosRankSum=2.311;VQSLOD=4.2171;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:63.19:0,63,1027	0/0:10,0:10:30.08:0,30,453	0/0:11,0:8:16.36:0,16,198	0/0:9,0:7:17.72:0,18,183	0/0:24,0:24:72.17:0,72,1106	0/0:22,0:22:63.20:0,63,1061	0/0:7,0:7:21.06:0,21,335	0/0:35,0:33:93.12:0,93,1400	0/0:7,0:7:21.05:0,21,313	0/0:15,0:15:45.15:0,45,747	0/0:13,0:13:39.11:0,39,620	0/0:9,0:9:27.04:0,27,343	0/0:20,0:20:58.96:0,59,834	0/0:8,0:8:20.16:0,20,334	0/0:10,0:10:30.10:0,30,513	0/0:12,0:12:33.11:0,33,570	0/0:20,0:20:54.11:0,54,856	1/1:0,25:24:51.17:738,51,0	0/0:18,0:17:48.15:0,48,809	0/0:14,0:14:42.13:0,42,698	0/0:2,0:2:6:0,6,76	0/0:7,0:7:21.04:0,21,309	0/0:4,0:4:12.04:0,12,207	0/0:8,0:8:18.03:0,18,255	0/0:12,0:12:33.09:0,33,516	0/0:22,0:22:66.20:0,66,1034	0/0:19,0:19:57.10:0,57,857	0/0:10,0:10:30.09:0,30,465
chr10	73085179	.	TTG	T	39.42	PASS	AB=0.944;AC=5;AF=0.114;AN=44;BaseQRankSum=5.249;DP=241;FS=24.936;HRun=0;HaplotypeScore=41.0040;InbreedingCoeff=0.1702;MQ=89.78;MQ0=8;MQRankSum=1.161;QD=0.36;ReadPosRankSum=-2.019;VQSLOD=-0.5094;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:4:12.04:0,12,221	0/1:30,0:12:4.29:37,0,4	0/1:66,0:24:6.39:6,0,80	0/0:4,0:4:12.03:0,12,208	0/0:10,0:10:27.09:0,27,549	./.	0/0:41,0:41:99:0,123,2264	0/0:4,0:4:12.01:0,12,191	./.	./.	0/0:3,0:3:9.03:0,9,168	0/0:4,0:4:9.03:0,9,160	0/0:3,0:3:9:0,9,143	0/0:4,0:4:12.04:0,12,244	0/0:1,0:1:3.01:0,3,61	0/0:14,1:15:38.96:0,39,617	1/1:3,4:7:5.34:73,5,0	0/0:9,0:9:27.04:0,27,427	0/0:2,0:2:6.02:0,6,122	0/0:1,0:1:3.01:0,3,61	./.	0/0:3,0:3:9.03:0,9,183	0/0:1,0:1:3.01:0,3,61	./.	0/0:2,0:2:6.02:0,6,122	0/1:4,1:5:26.21:26,0,217	0/0:16,0:15:45.15:0,45,865
chr10	73085387	.	TAG	T	174.80	PASS	AC=6;AF=0.136;AN=44;BaseQRankSum=3.485;DP=375;FS=0.000;HRun=0;HaplotypeScore=52.0199;InbreedingCoeff=0.4657;MQ=61.89;MQ0=49;MQRankSum=3.054;QD=17.48;ReadPosRankSum=-1.726;VQSLOD=3.0496;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:1,0:1:3.01:0,3,58	0/0:61,0:18:17.02:0,17,99	0/0:169,0:48:30.11:0,30,352	0/0:3,0:3:9.03:0,9,173	0/0:11,0:11:21.07:0,21,387	0/0:1,0:1:3.01:0,3,40	0/0:54,0:30:87.25:0,87,1463	0/0:1,0:1:3.01:0,3,58	1/1:1,4:5:15.03:202,15,0	1/1:2,1:3:1.14:37,1,0	./.	0/0:1,0:1:1.25:0,1,3	0/0:1,0:1:3.01:0,3,58	./.	0/0:1,0:1:3.01:0,3,58	0/0:12,0:10:21.07:0,21,399	0/0:9,0:6:6.17:0,6,79	0/0:9,0:6:18.05:0,18,310	0/0:2,0:2:6.02:0,6,116	./.	./.	1/1:1,1:1:3.01:44,3,0	./.	0/0:3,4:6:0.89:0,1,2	0/0:7,0:6:18.06:0,18,347	0/0:2,0:2:6.02:0,6,116	0/0:7,0:6:15.05:0,15,288
chr10	73085417	.	G	GAT	352.81	PASS	AB=0.857;AC=12;AF=0.273;AN=44;BaseQRankSum=6.328;DP=282;FS=7.797;HRun=0;HaplotypeScore=41.0077;InbreedingCoeff=0.4119;MQ=62.04;MQ0=23;MQRankSum=0.339;QD=2.94;ReadPosRankSum=1.827;VQSLOD=-0.0101;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:1,0:1:3.01:0,3,41	0/0:39,0:14:5.70:0,6,59	0/1:83,0:21:3.67:4,0,40	0/0:3,0:3:6.02:0,6,82	0/0:9,0:9:15.05:0,15,206	0/0:2,0:2:3.01:0,3,41	0/0:55,0:44:99:0,111,1484	0/0:1,0:1:3.01:0,3,41	1/1:7,1:8:17.72:180,18,0	0/1:3,2:5:27.28:121,0,27	./.	1/1:0,1:1:3.01:53,3,0	0/0:2,0:2:3.01:0,3,41	./.	0/0:1,0:1:3.01:0,3,36	0/0:16,0:14:36.11:0,36,476	1/1:7,2:7:7.85:64,8,0	0/0:9,0:7:18.06:0,18,247	0/0:4,0:4:9.03:0,9,123	./.	./.	1/1:2,0:2:2.60:10,3,0	./.	1/1:5,2:6:3.01:53,3,0	0/0:5,0:4:12.04:0,12,165	0/0:4,0:4:9.03:0,9,123	0/0:3,0:3:9.03:0,9,124
chr10	73085485	.	TATAG	T	218.32	PASS	AC=6;AF=0.143;AN=42;BaseQRankSum=4.042;DP=182;FS=8.426;HRun=0;HaplotypeScore=33.9500;InbreedingCoeff=0.4544;MQ=55.67;MQ0=13;MQRankSum=-2.970;QD=18.19;ReadPosRankSum=1.249;VQSLOD=1.7415;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:3,0:3:9.03:0,9,199	0/0:11,0:1:0.47:0,0,1	0/0:15,0:5:9:0,9,99	0/0:1,0:1:3.01:0,3,43	0/0:9,0:9:24.08:0,24,562	./.	0/0:58,0:47:99:0,119,1590	0/0:2,0:2:6.02:0,6,110	1/1:0,4:4:12.04:203,12,0	1/1:1,1:2:2.98:22,3,0	0/0:4,0:3:3.01:0,3,78	./.	0/0:2,0:2:3.01:0,3,78	0/0:1,0:1:3.01:0,3,78	0/0:2,0:2:6.02:0,6,121	0/0:20,0:20:52.01:0,52,835	1/1:4,2:5:6.02:102,6,0	0/0:14,0:10:25.02:0,25,452	0/0:1,0:1:3.01:0,3,43	0/0:1,0:1:3.01:0,3,43	0/0:1,0:1:3.01:0,3,78	./.	./.	./.	./.	0/0:5,0:5:9.03:0,9,162	0/0:9,0:9:24.08:0,24,423
chr10	73085550	.	AT	A	79.91	PASS	AB=0.714;AC=7;AF=0.159;AN=44;BaseQRankSum=5.245;DP=233;FS=0.000;HRun=2;HaplotypeScore=29.7090;InbreedingCoeff=0.5143;MQ=46.81;MQ0=17;MQRankSum=-2.646;QD=3.20;ReadPosRankSum=-0.265;VQSLOD=-0.4799;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,4:6:0.12:0,0,0	0/0:2,0:2:6.02:0,6,82	./.	./.	0/0:6,0:6:0:0,0,0	0/0:16,0:15:24.08:0,24,359	0/0:3,0:3:6.02:0,6,89	0/0:46,0:44:99:0,126,1828	0/0:3,0:2:6.02:0,6,89	1/1:1,0:1:3.01:37,3,0	./.	0/0:1,0:1:3.01:0,3,45	./.	0/0:4,0:4:9.03:0,9,124	0/0:5,0:5:15.05:0,15,224	0/0:6,0:6:18.06:0,18,268	0/0:26,2:26:64.06:0,64,939	1/1:5,7:10:13.13:140,13,0	0/0:15,0:13:11.13:0,11,465	0/0:1,0:1:3.01:0,3,45	0/0:2,0:2:6.02:0,6,89	0/0:1,0:1:3.01:0,3,44	1/1:2,0:2:2.22:7,2,0	./.	./.	0/0:8,0:7:10.58:0,11,190	0/0:6,0:6:15.04:0,15,204	0/0:27,0:23:54.18:0,54,796
chr10	73085587	.	A	AT	327.42	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=-2.256;DP=292;FS=7.499;HRun=1;HaplotypeScore=34.9425;InbreedingCoeff=0.7622;MQ=48.97;MQ0=24;MQRankSum=2.789;QD=18.19;ReadPosRankSum=-1.908;VQSLOD=2.7158;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:13:21.19:0,21,273	0/0:3,0:3:9.03:0,9,116	./.	./.	0/0:9,0:9:12.04:0,12,156	0/0:14,0:13:30.10:0,30,389	0/0:6,0:6:15.05:0,15,195	0/0:53,0:23:66.19:0,66,827	0/0:7,0:6:18.06:0,18,234	0/0:10,0:10:30.10:0,30,390	0/0:6,0:5:15.05:0,15,195	1/1:0,3:3:3.01:45,3,0	1/1:0,1:1:3.01:45,3,0	0/0:6,0:6:15.05:0,15,195	0/0:6,0:6:15.05:0,15,195	0/0:6,0:6:15.05:0,15,195	0/0:31,0:28:75.24:0,75,973	0/0:19,0:17:38.86:0,39,479	0/0:17,0:12:36.12:0,36,468	0/0:3,0:3:9.03:0,9,117	0/0:3,0:3:9.01:0,9,100	1/1:1,3:4:6.02:90,6,0	1/1:4,3:7:5.31:150,5,0	1/1:0,3:3:9.03:135,9,0	0/0:6,0:6:12.04:0,12,156	0/0:12,0:12:33.11:0,33,428	0/0:12,0:12:33.11:0,33,423	0/0:23,0:21:48.11:0,48,604
chr10	73087353	.	TAGCTAGGGCTAG	T	855.52	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.122;DP=650;FS=0.000;HRun=0;HaplotypeScore=216.6326;InbreedingCoeff=0.9982;MQ=82.43;MQ0=0;MQRankSum=-4.365;QD=77.77;ReadPosRankSum=-0.077;VQSLOD=3.3237;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,6997	0/0:15,0:15:45.15:0,45,2587	0/0:20,0:21:38.44:0,38,2104	0/0:14,0:14:33:0,33,927	0/0:17,0:17:51.18:0,51,2886	0/0:27,0:27:78.25:0,78,4678	0/0:27,0:27:75.24:0,75,4323	0/0:25,0:25:72.25:0,72,4078	0/0:18,0:18:54.19:0,54,3210	0/0:21,0:21:63.22:0,63,3723	0/0:11,0:11:33.11:0,33,1977	0/0:32,0:32:96.33:0,96,5579	0/0:23,0:23:63.22:0,63,3857	0/0:33,0:33:99:0,99,5672	0/0:32,0:32:93.32:0,93,5483	0/0:24,0:24:69.24:0,69,3638	0/0:28,0:28:81.28:0,81,4683	1/1:1,10:11:27.09:950,27,0	0/0:24,0:24:66.23:0,66,3672	0/0:20,0:20:60.21:0,60,3564	0/0:47,0:47:99:0,135,7916	0/0:15,0:15:45.15:0,45,2487	0/0:13,0:13:39.13:0,39,2213	0/0:25,0:25:72.25:0,72,4358	0/0:14,0:14:39.13:0,39,2333	0/0:31,0:31:84.28:0,84,4619	0/0:31,0:31:90.31:0,90,5464	0/0:13,0:13:39.13:0,39,2404
chr10	73089443	.	ACCATCACCACCATCATCATCC	A	366.79	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=-0.605;DP=1054;FS=5.191;HRun=0;HaplotypeScore=550.1548;InbreedingCoeff=0.4143;MQ=60.95;MQ0=5;MQRankSum=-5.360;QD=2.53;ReadPosRankSum=-1.497;VQSLOD=-0.5132;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:88,0:85:99:240,0,271	0/0:11,0:11:18.06:0,18,782	0/0:42,0:37:33.39:0,33,513	0/0:44,0:36:17.36:0,17,500	0/0:29,0:29:48.13:0,48,2370	0/0:27,0:27:60.16:0,60,2919	0/0:38,0:38:60.16:0,60,2460	0/0:36,0:36:48.15:0,48,1123	0/0:32,0:32:60.19:0,60,3441	0/0:56,0:56:99:0,126,4827	0/0:24,0:24:30.02:0,30,1203	0/0:49,0:49:99:0,106,5997	0/0:53,0:53:99:0,107,6229	0/0:30,0:30:60.19:0,60,3967	0/0:38,0:38:84.27:0,84,5218	0/0:37,0:36:81.25:0,81,4982	0/0:27,0:27:45.13:0,45,2811	1/1:11,19:30:6.02:220,6,0	0/0:29,0:29:39.08:0,39,1964	0/0:25,0:25:54.19:0,54,3316	0/0:79,0:78:99:0,141,8105	0/1:27,0:27:3.87:4,0,1228	0/0:31,0:30:37.21:0,37,1327	0/0:40,0:40:49.98:0,50,2931	0/0:50,0:51:75.19:0,75,2313	0/0:34,0:33:63.19:0,63,3146	0/0:34,0:34:75.26:0,75,4691	0/0:13,0:13:33.11:0,33,2100
chr10	73089468	.	T	TCACCTC	1069.12	PASS	AB=0.850;AC=2;AF=0.036;AN=56;BaseQRankSum=2.698;DP=1121;FS=8.885;HRun=0;HaplotypeScore=300.5382;InbreedingCoeff=-0.0380;MQ=59.32;MQ0=8;MQRankSum=-7.369;QD=6.85;ReadPosRankSum=-4.194;VQSLOD=-0.1068;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:75,36:127:99:1070,0,1333	0/0:10,0:10:21.07:0,21,465	0/0:37,0:32:43.57:0,44,1132	0/0:36,0:29:53.82:0,54,1140	0/0:24,0:24:57.16:0,57,1224	0/0:28,0:28:78.21:0,78,1631	0/0:32,0:32:84.24:0,84,1752	0/0:33,0:33:90.29:0,90,1855	0/0:30,0:30:87.28:0,87,1891	0/0:62,0:61:99:0,175,3886	0/0:32,0:32:48.09:0,48,1083	0/0:62,0:62:99:0,131,3120	0/0:60,0:59:99:0,123,2952	0/0:31,0:31:93.27:0,93,2043	0/0:33,0:33:96.31:0,96,2104	0/0:41,0:40:99:0,114,2497	0/0:35,0:35:96.30:0,96,2117	0/1:25,0:25:88.40:88,0,115	0/0:25,0:25:66.16:0,66,1276	0/0:28,0:28:78.24:0,78,1648	0/0:76,0:73:99:0,186,4070	0/0:36,1:37:13.61:0,14,1528	0/0:35,0:34:66.54:0,67,1382	0/0:42,0:42:77.58:0,78,1636	0/0:54,0:55:48.48:0,48,1620	0/0:33,0:32:93.29:0,93,1960	0/0:32,0:32:96.33:0,96,2179	0/0:15,0:14:39.13:0,39,885
chr10	73089489	.	TCACCTC	T	920.38	PASS	AB=0.785;AC=2;AF=0.036;AN=56;BaseQRankSum=2.483;DP=1095;FS=14.741;HRun=0;HaplotypeScore=301.8298;InbreedingCoeff=-0.0385;MQ=57.27;MQ0=4;MQRankSum=-6.151;QD=8.29;ReadPosRankSum=-1.869;VQSLOD=0.9395;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:127,1:127:99:0,225,6366	0/0:6,0:6:15.05:0,15,528	0/0:35,0:28:62.39:0,62,1866	0/0:37,0:29:54.99:0,55,1703	0/0:20,0:20:51.16:0,51,1625	0/0:24,0:24:72.21:0,72,2247	0/0:31,0:32:81.22:0,81,2551	0/0:30,0:30:75.25:0,75,2246	0/0:30,0:30:87.26:0,87,2764	0/1:54,13:66:99:881,0,3614	0/0:22,8:30:13.21:0,13,1279	0/0:64,0:64:99:0,155,4830	0/0:59,0:59:99:0,146,4388	0/0:28,0:28:81.28:0,81,2789	0/0:33,0:33:90.30:0,90,2971	0/0:40,0:40:99:0,117,3887	0/0:37,0:37:99:0,108,3599	0/0:31,0:31:33.38:0,33,1386	0/0:31,0:31:87.26:0,87,2530	0/0:29,0:28:78.27:0,78,2476	0/0:80,0:78:99:0,203,6685	0/0:36,0:36:68.94:0,69,2169	0/0:30,0:30:49.37:0,49,1471	0/0:44,0:44:88.44:0,88,2657	0/1:28,16:44:99:129,0,1373	0/0:26,0:26:63.04:0,63,1976	0/0:30,0:30:87.27:0,87,2537	0/0:13,0:12:39.13:0,39,1377
chr10	73089523	.	CATT	C	1154.46	PASS	AB=0.887;AC=6;AF=0.107;AN=56;BaseQRankSum=5.785;DP=926;FS=8.079;HRun=0;HaplotypeScore=215.7911;InbreedingCoeff=-0.1184;MQ=72.04;MQ0=0;MQRankSum=-5.843;QD=3.97;ReadPosRankSum=-5.596;VQSLOD=0.1947;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:73,1:73:7.50:8,0,1491	0/0:5,0:5:14.96:0,15,265	0/0:42,0:38:99:0,105,2295	0/0:56,1:49:99:0,120,2354	0/0:17,0:17:51.17:0,51,1208	0/0:17,0:17:51.17:0,51,1207	0/0:32,0:32:92.88:0,93,2109	0/0:32,0:32:96.30:0,96,2136	0/0:33,0:33:95.58:0,96,2038	0/0:45,0:45:58.76:0,59,724	0/0:14,0:14:31.63:0,32,208	0/1:42,12:54:99:533,0,1815	0/1:40,10:50:99:423,0,1904	0/0:23,0:23:69.23:0,69,1618	0/0:30,0:30:90.27:0,90,2058	0/0:37,0:37:99:0,111,2629	0/0:42,0:42:99:0,126,3096	0/0:30,0:30:63.19:0,63,1435	0/0:15,0:15:45.11:0,45,988	0/0:25,0:25:69.19:0,69,1643	0/0:61,0:61:99:0,184,4322	0/1:27,12:39:99:129,0,1537	0/0:18,5:23:12.45:0,12,1006	0/1:41,4:45:99:163,0,1788	0/1:29,0:29:20.58:21,0,350	0/0:17,0:17:51.16:0,51,1203	0/0:28,0:28:81.69:0,82,1852	0/0:10,0:10:27.05:0,27,608
chr10	73092388	.	ATGTG	A	2044.23	PASS	AB=0.727;AC=13;AF=0.250;AN=52;BaseQRankSum=4.081;DP=552;FS=1.282;HRun=0;HaplotypeScore=94.7610;InbreedingCoeff=0.8348;MQ=59.40;MQ0=9;MQRankSum=0.748;QD=14.81;ReadPosRankSum=1.906;VQSLOD=2.8061;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,13:30:20.59:419,21,0	0/0:6,0:8:11.51:0,12,157	./.	./.	0/0:19,0:20:26.83:0,27,457	0/0:23,0:20:30.10:0,30,674	0/0:16,0:28:14.08:0,14,231	0/0:24,0:24:11.47:0,11,111	0/0:14,0:20:39.58:0,40,692	0/0:17,0:28:47.62:0,48,799	0/0:7,0:14:6.02:0,6,119	1/1:11,9:20:18.06:282,18,0	1/1:6,13:20:33.09:479,33,0	0/0:12,0:12:18.06:0,18,369	0/0:16,0:18:23.55:0,24,417	0/0:15,0:15:28.34:0,28,585	0/0:27,0:33:41.58:0,42,724	0/1:10,1:15:61.50:62,0,112	0/0:21,0:19:9.02:0,9,169	0/0:14,0:14:20.54:0,21,344	0/0:16,0:15:18.02:0,18,271	1/1:7,6:13:15.04:216,15,0	1/1:5,9:17:27.07:366,27,0	1/1:11,10:20:27.08:404,27,0	0/0:7,0:16:14.99:0,15,257	0/0:21,0:25:35.43:0,35,396	0/0:23,0:25:45.36:0,45,881	0/0:7,0:9:14.52:0,15,230
chr10	73093633	.	GCGCGCACACACA	G	1657.19	PASS	AB=1.000;AC=13;AF=0.250;AN=52;BaseQRankSum=2.969;DP=472;FS=6.252;HRun=0;HaplotypeScore=138.9257;InbreedingCoeff=0.7332;MQ=58.16;MQ0=12;MQRankSum=-0.502;QD=16.09;ReadPosRankSum=1.308;VQSLOD=1.8480;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:11,0:11:27.09:0,27,592	1/1:4,0:3:0.46:1,0,0	./.	0/0:15,0:15:40.93:0,41,1271	0/0:19,0:16:45.14:0,45,1477	0/0:26,0:26:52.86:0,53,1379	0/0:12,0:12:16.05:0,16,242	0/0:17,0:17:48.16:0,48,1352	0/0:11,0:10:30.06:0,30,765	0/0:5,0:4:2.74:0,3,41	1/1:3,13:16:12.04:461,12,0	1/1:0,10:11:6.02:203,6,0	0/0:16,0:16:39.08:0,39,1564	0/0:10,0:10:27.09:0,27,1114	0/0:12,0:12:36.12:0,36,1173	0/0:35,0:35:92.01:0,92,3502	0/1:22,0:22:99:302,0,1071	0/0:16,0:12:33.10:0,33,844	0/0:21,0:21:52.05:0,52,1656	0/0:41,0:41:99:0,99,2570	1/1:2,1:16:9.41:247,9,0	1/1:10,0:10:27.09:484,27,0	1/1:2,22:23:2.80:115,3,0	0/0:20,0:20:34.48:0,34,960	0/0:17,0:15:45.11:0,45,1297	0/0:14,0:14:37.36:0,37,1481	0/0:13,0:11:24.08:0,24,614
chr10	73093637	.	GCA	G	329.81	PASS	AB=0.970;AC=21;AF=0.420;AN=50;BaseQRankSum=3.627;DP=495;FS=6.211;HRun=0;HaplotypeScore=80.7436;InbreedingCoeff=-0.0629;MQ=55.61;MQ0=16;MQRankSum=0.132;QD=1.04;ReadPosRankSum=-0.026;VQSLOD=1.0058;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:2.68:0,3,11	0/1:11,0:11:27.99:47,0,28	./.	./.	0/0:14,0:14:11.12:0,11,153	0/0:18,0:15:12.02:0,12,149	0/1:29,0:29:17.52:18,0,159	0/0:12,0:12:7.20:0,7,45	0/1:18,1:19:34.94:35,0,103	0/0:12,0:11:9.01:0,9,83	0/0:9,0:8:2.59:0,3,25	1/1:16,0:16:11.36:56,11,0	1/1:11,0:11:5.06:21,5,0	0/0:15,3:18:1.66:0,2,324	0/1:13,0:13:0.73:1,0,203	0/1:12,0:12:12.34:12,0,112	0/1:34,2:37:99:127,0,402	0/0:21,0:21:30.93:0,31,297	0/1:17,0:12:3.04:3,0,17	0/1:22,0:22:22.99:23,0,256	0/1:41,4:43:8.28:8,0,152	1/1:16,0:16:5.66:28,6,0	./.	1/1:24,0:23:2.63:14,3,0	0/0:15,0:23:9.01:0,9,94	0/1:17,0:15:15.85:16,0,136	0/1:13,1:14:38:38,0,202	1/1:10,2:10:1.81:30,2,0
chr10	73093643	.	A	ACG	337.24	PASS	AB=0.914;AC=6;AF=0.111;AN=54;BaseQRankSum=5.245;DP=496;FS=0.934;HRun=0;HaplotypeScore=80.4275;InbreedingCoeff=0.3755;MQ=53.61;MQ0=19;MQRankSum=1.228;QD=5.72;ReadPosRankSum=-0.143;VQSLOD=2.9152;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:2.22:0,2,7	0/0:10,0:10:23.77:0,24,234	1/1:2,0:1:2.04:6,2,0	./.	0/0:14,0:14:38.95:0,39,389	0/0:20,0:17:39:0,39,398	0/0:28,0:26:44.17:0,44,467	0/0:13,0:13:38.65:0,39,279	0/0:19,0:19:46.44:0,46,432	0/0:9,0:8:23.22:0,23,201	0/0:11,0:10:8.98:0,9,73	0/0:16,0:16:5:0,5,36	1/1:11,0:11:1.94:7,2,0	0/0:18,0:18:38.83:0,39,470	0/0:15,0:15:27.22:0,27,340	0/0:13,0:13:36:0,36,360	0/0:37,0:37:91.36:0,91,992	0/1:19,5:24:9.21:410,0,9	0/0:16,0:11:29.64:0,30,263	0/0:23,0:23:54.32:0,54,603	0/0:43,0:41:83.47:0,83,747	0/0:16,0:16:8.61:0,9,46	0/0:8,0:8:20.96:0,21,172	0/0:24,0:23:2.68:0,3,14	0/1:22,0:22:1.12:1,0,218	0/0:20,0:16:48.01:0,48,503	0/0:14,0:14:35.88:0,36,388	0/0:11,0:8:17.93:0,18,158
chr10	73097130	.	CAA	C	1884.55	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=3.379;DP=504;FS=5.233;HRun=12;HaplotypeScore=78.7831;InbreedingCoeff=0.9118;MQ=68.89;MQ0=6;MQRankSum=2.100;QD=14.39;ReadPosRankSum=3.694;VQSLOD=2.5563;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,23:27:59.33:609,59,0	0/0:5,0:5:15.03:0,15,187	0/0:20,0:10:8.31:0,8,110	0/1:30,0:12:2.70:3,0,21	0/0:21,1:22:22.46:0,22,609	0/0:17,0:18:50.64:0,51,679	0/0:18,0:18:48.13:0,48,652	0/0:19,0:19:39.01:0,39,446	0/0:9,0:11:26.05:0,26,301	0/0:17,0:16:33.23:0,33,389	0/0:15,0:15:31.26:0,31,350	1/1:2,8:9:26.73:255,27,0	1/1:2,8:11:14.75:204,15,0	0/0:13,0:14:35.09:0,35,454	0/0:17,0:17:50.62:0,51,674	0/0:14,0:15:41.62:0,42,571	0/0:25,0:29:72.14:0,72,937	0/0:14,0:23:51.07:0,51,428	0/0:14,0:15:32.58:0,33,420	0/0:24,0:25:57.10:0,57,759	0/0:15,0:17:50.81:0,51,669	1/1:1,13:14:24.03:244,24,0	1/1:2,18:22:44.56:421,45,0	1/1:2,14:16:33.07:336,33,0	0/0:24,0:21:40.20:0,40,370	0/0:17,0:19:51.14:0,51,682	0/0:17,0:16:35.10:0,35,472	0/0:7,0:8:18.05:0,18,250
chr10	73097237	.	A	AG	447.81	PASS	AB=0.844;AC=10;AF=0.179;AN=56;BaseQRankSum=-0.542;DP=635;FS=56.515;HRun=0;HaplotypeScore=59.7273;InbreedingCoeff=-0.1833;MQ=42.39;MQ0=106;MQRankSum=3.264;QD=1.94;ReadPosRankSum=0.693;VQSLOD=0.0558;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:34:35.60:36,0,156	0/0:9,0:7:12.76:0,13,83	0/0:20,0:3:4.66:0,5,19	0/1:29,0:5:4.38:4,0,5	0/0:27,0:25:64.93:0,65,462	0/0:17,0:16:36.97:0,37,266	0/0:28,0:19:56.37:0,56,393	0/0:36,0:31:78.45:0,78,542	0/0:11,0:7:20.55:0,21,135	0/1:14,21:33:76.13:256,0,76	0/1:11,9:19:40.35:40,0,47	0/1:5,9:14:25.94:35,0,26	0/1:17,1:13:35.07:43,0,35	0/0:11,0:10:29.65:0,30,220	0/0:16,0:12:26.74:0,27,187	0/0:14,0:12:35.28:0,35,262	0/0:42,0:37:75.98:0,76,501	0/0:17,0:7:15.53:0,16,98	0/0:27,0:20:50.78:0,51,411	0/0:24,0:20:57.11:0,57,393	0/0:9,0:5:11.96:0,12,96	0/1:15,0:15:48.48:48,0,62	0/1:12,0:10:41.37:84,0,41	0/1:21,0:8:18.84:19,0,33	0/1:7,12:19:23.54:24,0,51	0/0:35,0:34:93.59:0,94,669	0/0:24,0:19:53.66:0,54,408	0/0:37,0:26:74.33:0,74,540
chr10	73097788	.	G	GAC	1183.91	PASS	AB=0.820;AC=18;AF=0.346;AN=52;BaseQRankSum=-0.497;DP=508;FS=2.540;HRun=0;HaplotypeScore=92.8157;InbreedingCoeff=0.1830;MQ=66.98;MQ0=6;MQRankSum=-0.554;QD=5.00;ReadPosRankSum=-3.243;VQSLOD=1.3601;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,15:50:71.02:281,0,71	0/0:8,0:8:9.02:0,9,98	./.	./.	0/0:10,0:11:8.85:0,9,80	0/0:12,0:12:3.01:0,3,33	0/1:23,0:25:5.51:6,0,96	0/0:24,0:24:3.01:0,3,33	0/0:19,0:20:8.85:0,9,80	1/1:16,0:16:14.74:123,15,0	1/1:14,0:13:9.02:110,9,0	0/1:6,6:14:26.82:39,0,27	0/1:8,6:13:17.80:164,0,18	0/1:13,0:14:29.62:30,0,98	0/0:12,0:13:17.86:0,18,168	0/0:16,0:17:17.88:0,18,178	0/0:25,0:30:37.73:0,38,310	1/1:11,0:11:9.27:91,9,0	0/0:8,0:9:5.84:0,6,42	0/1:7,1:10:19.24:36,0,19	0/0:28,0:28:20.60:0,21,216	0/1:9,2:12:8.35:39,0,8	1/1:7,6:12:9.03:135,9,0	0/1:17,10:29:8.77:271,0,9	1/1:14,0:14:2.99:24,3,0	0/0:18,0:18:11.68:0,12,122	0/0:17,0:21:24.05:0,24,271	0/0:12,0:12:2.98:0,3,23
chr10	73097940	.	GAA	G	3023.26	PASS	AB=0.941;AC=16;AF=0.286;AN=56;BaseQRankSum=7.641;DP=584;FS=8.763;HRun=13;HaplotypeScore=76.2670;InbreedingCoeff=0.8409;MQ=73.77;MQ0=1;MQRankSum=0.344;QD=17.48;ReadPosRankSum=4.138;VQSLOD=2.4490;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,20:27:50.41:477,50,0	0/1:10,0:10:1.77:2,0,286	0/0:22,0:19:23.98:0,24,285	0/0:10,0:10:13.21:0,13,144	0/0:18,0:20:53.59:0,54,671	0/0:17,0:18:38.58:0,39,507	0/0:16,0:20:50.12:0,50,622	0/0:28,0:29:72.19:0,72,994	0/0:18,0:18:46.94:0,47,621	0/0:20,0:20:45.14:0,45,632	0/0:19,0:20:54.15:0,54,716	1/1:3,14:17:36.04:349,36,0	1/1:3,23:26:57.06:553,57,0	0/0:17,0:20:50.07:0,50,610	0/0:24,0:25:59.69:0,60,833	0/0:17,0:19:53.15:0,53,708	0/0:30,0:30:71.73:0,72,1002	1/1:3,20:23:33.17:526,33,0	0/0:13,0:17:38.57:0,39,480	0/0:22,0:24:53.12:0,53,659	0/1:13,2:14:28.07:28,0,263	1/1:1,18:19:46.35:462,46,0	1/1:3,15:18:42.06:407,42,0	1/1:2,15:18:44.80:418,45,0	0/0:12,1:15:7.38:0,7,384	0/0:28,0:31:83.66:0,84,1050	0/0:32,0:33:84.04:0,84,1122	0/0:18,0:18:39.12:0,39,548
chr10	73098303	.	TA	T	683.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.858;DP=570;FS=16.968;HRun=2;HaplotypeScore=59.5544;InbreedingCoeff=0.9826;MQ=71.40;MQ0=0;MQRankSum=-1.170;QD=28.49;ReadPosRankSum=1.977;VQSLOD=2.0490;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.22:0,66,988	0/0:16,0:16:45.15:0,45,669	0/0:13,0:12:26.10:0,26,282	0/0:9,0:9:18.27:0,18,224	0/0:33,0:33:96.32:0,96,1434	0/0:22,0:22:66.22:0,66,989	0/0:14,0:14:42.14:0,42,629	0/0:41,0:41:99:0,123,1809	0/0:13,0:13:39.13:0,39,584	0/0:19,0:19:54.18:0,54,792	0/0:19,0:19:57.18:0,57,836	0/0:22,0:22:63.21:0,63,927	0/0:12,0:12:36.10:0,36,518	0/0:15,0:15:36.12:0,36,540	0/0:21,0:21:63.21:0,63,944	0/0:30,0:29:90.28:0,90,1311	0/0:25,0:25:75.25:0,75,1123	1/1:0,24:24:60.20:779,60,0	0/0:22,0:22:66.22:0,66,972	0/0:19,0:19:54.17:0,54,791	0/0:11,0:11:33.09:0,33,474	0/0:7,0:7:18.06:0,18,265	0/0:17,0:17:48.15:0,48,689	0/0:12,0:12:33.11:0,33,495	0/0:26,0:26:78.25:0,78,1149	0/0:30,0:30:87.29:0,87,1286	0/0:25,0:25:72.20:0,72,1017	0/0:31,0:31:87.29:0,87,1296
chr10	73099241	.	CA	C	473.61	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=10.924;DP=471;FS=0.509;HRun=1;HaplotypeScore=57.5727;InbreedingCoeff=0.5936;MQ=85.78;MQ0=0;MQRankSum=-2.052;QD=6.31;ReadPosRankSum=3.182;VQSLOD=0.7254;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:24.18:157,0,24	0/0:6,0:6:18.04:0,18,233	0/0:16,0:16:25.25:0,25,540	0/0:19,0:19:45.03:0,45,666	0/0:18,0:18:54.15:0,54,757	0/0:19,0:19:57.18:0,57,840	0/0:33,0:33:99:0,99,1409	0/0:21,0:21:60.16:0,60,822	0/0:11,0:11:33.09:0,33,468	0/0:21,0:21:41.23:0,41,826	0/0:9,0:9:27.09:0,27,401	1/1:14,2:16:4.30:147,4,0	1/1:8,1:9:23.97:129,24,0	0/0:17,0:17:51.17:0,51,766	0/0:21,0:21:54.24:0,54,820	0/0:19,0:19:54.04:0,54,750	0/0:25,0:25:75.21:0,75,1097	0/0:30,0:30:90.23:0,90,1297	0/0:10,0:10:30.10:0,30,458	0/0:11,0:11:30.05:0,30,410	0/0:36,0:36:99:0,105,1514	0/1:3,0:3:10.94:11,0,15	0/1:4,0:4:3.54:4,0,19	1/1:16,1:17:17.17:171,17,0	0/0:14,0:14:39.11:0,39,538	0/0:18,0:18:48.15:0,48,711	0/0:12,0:12:33.11:0,33,500	0/0:10,0:10:30.02:0,30,365
chr10	73099242	.	AC	A	1792.92	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.535;DP=473;FS=0.511;HRun=5;HaplotypeScore=54.8309;InbreedingCoeff=0.9326;MQ=86.43;MQ0=0;MQRankSum=-5.726;QD=23.28;ReadPosRankSum=2.217;VQSLOD=2.5368;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:25:57.16:646,57,0	0/0:5,0:5:15.01:0,15,184	0/0:15,1:16:8.38:0,8,449	0/0:20,0:20:47.17:0,47,554	0/0:18,0:18:51.17:0,51,691	0/0:19,0:19:54.18:0,54,738	0/0:33,0:33:87.28:0,87,1173	0/0:20,0:20:45.14:0,45,596	0/0:11,0:11:30.10:0,30,410	0/0:22,0:22:54.18:0,54,738	0/0:9,0:9:27.09:0,27,367	1/1:6,12:18:39.09:427,39,0	1/1:2,8:10:27.07:302,27,0	0/0:17,0:17:51.17:0,51,695	0/0:21,0:21:54.16:0,54,721	0/0:19,0:19:54.15:0,54,703	0/0:25,0:25:69.21:0,69,912	0/0:30,0:30:84.28:0,84,1139	0/0:10,0:10:30.09:0,30,395	0/0:12,0:12:33.08:0,33,414	0/0:35,0:35:96.30:0,96,1294	1/1:1,2:3:9.01:92,9,0	1/1:1,3:4:3.01:34,3,0	1/1:2,15:17:42.11:469,42,0	0/0:13,0:13:36.12:0,36,489	0/0:19,0:19:48.16:0,48,656	0/0:12,0:12:36.11:0,36,476	0/0:10,0:10:18.04:0,18,228
chr10	73100557	.	C	CT	456.08	PASS	AB=1.000;AC=8;AF=0.148;AN=54;BaseQRankSum=-0.569;DP=455;FS=11.385;HRun=7;HaplotypeScore=46.6335;InbreedingCoeff=0.6338;MQ=34.82;MQ0=122;MQRankSum=-0.767;QD=6.42;ReadPosRankSum=-1.053;VQSLOD=-0.3990;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:15:17.32:0,17,173	0/0:11,0:7:9.01:0,9,87	./.	0/1:4,0:1:0:0,0,0	0/0:16,0:15:7.62:0,8,85	0/0:15,0:11:20.77:0,21,200	0/1:12,0:8:3.09:3,0,100	0/0:31,0:27:62.45:0,62,607	0/0:11,0:6:12.02:0,12,116	1/1:12,11:19:30.09:362,30,0	1/1:7,3:10:7.74:77,8,0	0/0:7,0:7:20.98:0,21,192	0/0:15,0:11:8.47:0,8,85	0/0:8,0:4:2.59:0,3,29	0/0:26,0:17:35.68:0,36,346	0/0:10,0:10:20.93:0,21,202	0/0:29,0:18:25.73:0,26,259	0/0:25,0:16:12.60:0,13,140	0/0:19,0:12:15.02:0,15,143	0/0:13,0:10:8.79:0,9,86	0/0:13,0:7:8.68:0,9,86	0/0:8,0:7:12.01:0,12,110	0/0:15,0:9:11.06:0,11,114	0/0:21,0:11:8.71:0,9,87	1/1:12,10:19:12.04:145,12,0	0/0:18,0:12:23.61:0,24,225	0/0:12,0:10:14.39:0,14,144	0/0:32,0:18:10.11:0,10,112
chr10	73100712	.	CTTT	C	1051.95	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.644;DP=494;FS=8.284;HRun=5;HaplotypeScore=89.4400;InbreedingCoeff=0.9115;MQ=53.52;MQ0=22;MQRankSum=-2.839;QD=10.84;ReadPosRankSum=0.646;VQSLOD=-0.4410;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:12:35.53:268,36,0	0/0:8,0:8:12.98:0,13,274	0/0:23,0:5:5.16:0,5,91	0/0:14,0:7:8.23:0,8,79	0/0:19,0:19:54.18:0,54,1189	0/0:18,0:18:45.15:0,45,1020	0/0:15,0:13:35.91:0,36,583	0/0:38,0:21:57.12:0,57,996	0/0:7,0:7:15.05:0,15,345	0/0:12,0:12:34.06:0,34,186	0/0:18,0:18:32.28:0,32,346	1/1:17,0:16:44.62:342,45,0	1/1:12,0:10:22.45:132,22,0	0/0:17,0:17:36.11:0,36,784	0/0:23,0:21:23.22:0,23,938	0/0:24,0:24:51.18:0,51,1170	0/0:42,0:42:69.40:0,69,1674	1/1:1,22:23:3:25,3,0	0/0:21,0:16:48.11:0,48,885	0/0:13,0:13:38.98:0,39,686	0/0:8,0:8:20.99:0,21,376	1/1:7,0:6:14.96:122,15,0	1/1:13,0:12:23.84:184,24,0	1/1:12,0:11:10.40:168,10,0	0/0:23,0:23:61.41:0,61,355	0/0:20,0:19:50.84:0,51,1104	0/0:22,0:22:59.82:0,60,1092	0/0:11,0:11:18.02:0,18,406
chr10	73100717	.	TC	T	1790.42	PASS	AB=0.646;AC=10;AF=0.179;AN=56;BaseQRankSum=9.043;DP=509;FS=17.528;HRun=1;HaplotypeScore=72.6048;InbreedingCoeff=0.6927;MQ=50.94;MQ0=35;MQRankSum=1.530;QD=22.66;ReadPosRankSum=2.195;VQSLOD=2.5092;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,9:14:59.44:318,0,59	0/0:9,0:9:17.11:0,17,191	0/0:17,1:4:12.03:0,12,139	0/0:12,0:3:8.05:0,8,77	0/0:20,0:19:54.17:0,54,732	0/0:18,0:18:45.08:0,45,604	0/0:14,0:12:36.12:0,36,498	0/0:37,0:19:54.11:0,54,693	0/0:9,0:9:14.63:0,15,209	0/0:12,0:11:33.08:0,33,347	0/0:18,0:18:51.04:0,51,555	1/1:2,15:16:45.15:622,45,0	1/1:4,8:10:23.94:287,24,0	0/0:18,0:18:32.95:0,33,460	0/0:27,0:24:51.11:0,51,662	0/0:26,0:26:50.53:0,51,710	0/0:42,0:40:83.35:0,83,1071	0/0:24,0:23:2.95:0,3,25	0/0:21,0:15:45.14:0,45,611	0/0:15,0:15:41.91:0,42,559	0/0:10,0:9:24.03:0,24,311	1/1:3,5:6:15.05:209,15,0	1/1:7,8:12:24.08:332,24,0	0/1:6,6:11:80.51:189,0,81	0/0:23,0:23:63.02:0,63,639	0/0:19,0:18:51.17:0,51,712	0/0:25,0:24:65.87:0,66,817	0/0:13,0:12:21.05:0,21,275
chr10	73101547	.	A	ATTG	14738.67	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-13.506;DP=801;FS=8.299;HRun=0;HaplotypeScore=107.8806;InbreedingCoeff=1.0000;MQ=84.43;MQ0=0;MQRankSum=-5.079;QD=54.79;ReadPosRankSum=2.791;VQSLOD=6.9365;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,46:48:99:2745,123,0	0/0:18,0:18:51.16:0,51,809	0/0:29,0:29:36.18:0,36,869	0/0:23,0:23:44.04:0,44,644	0/0:36,0:36:99:0,99,1562	0/0:26,0:26:78.26:0,78,1252	0/0:38,0:38:99:0,111,1765	0/0:27,0:27:78.25:0,78,1228	0/0:28,0:28:72.22:0,72,1127	1/1:9,28:39:99:2132,102,0	1/1:0,14:16:45.15:999,45,0	1/1:2,20:22:57.20:1271,57,0	1/1:0,20:20:51.18:1137,51,0	0/0:31,0:31:87.30:0,87,1419	0/0:33,0:33:96.30:0,96,1520	0/0:29,0:29:84.27:0,84,1347	0/0:34,0:34:99:0,99,1540	1/1:1,25:26:63.22:1398,63,0	0/0:26,0:26:70.11:0,70,1103	0/0:26,0:26:69.24:0,69,1124	0/0:39,0:39:99:0,105,1638	1/1:2,24:26:69.24:1540,69,0	1/1:3,21:24:51.04:1137,51,0	1/1:2,27:28:69.24:1510,69,0	1/1:2,17:19:39.13:870,39,0	0/0:38,0:38:99:0,105,1669	0/0:30,0:29:84.24:0,84,1294	0/0:21,0:21:63.22:0,63,1024
chr10	73105159	.	AAAAG	A	1096.80	PASS	AB=0.846;AC=12;AF=0.222;AN=54;BaseQRankSum=4.000;DP=389;FS=10.565;HRun=0;HaplotypeScore=67.0822;InbreedingCoeff=0.5945;MQ=60.39;MQ0=23;MQRankSum=-3.370;QD=9.22;ReadPosRankSum=1.723;VQSLOD=0.7606;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,8:16:35.05:396,35,0	0/0:8,0:8:21.07:0,21,432	0/0:31,0:13:10.60:0,11,269	0/1:27,0:12:6.21:6,0,55	0/0:12,0:12:21.29:0,21,269	0/0:11,0:11:21.04:0,21,315	0/0:20,0:19:50.74:0,51,776	0/0:20,0:19:50.94:0,51,752	0/0:6,0:6:9.85:0,10,110	0/0:12,0:9:21.43:0,21,317	0/0:13,0:11:23.96:0,24,338	1/1:3,7:10:10.72:147,11,0	1/1:7,2:8:14.84:159,15,0	0/0:15,0:15:38.14:0,38,693	0/0:10,0:10:29.81:0,30,483	0/0:6,0:6:15:0,15,245	0/0:32,0:32:39.28:0,39,814	0/1:21,1:20:9.82:67,0,10	0/0:15,0:13:29.45:0,29,487	0/0:10,0:8:17.99:0,18,280	0/0:13,0:10:22:0,22,316	0/1:3,5:5:3.05:141,0,3	1/1:3,5:6:12.04:164,12,0	0/1:10,3:12:37.63:183,0,38	0/0:9,0:8:15.05:0,15,285	0/0:12,0:9:19.07:0,19,243	0/0:9,0:9:18.03:0,18,281	./.
chr10	73105160	.	AAAG	A	967.44	PASS	AB=0.967;AC=14;AF=0.250;AN=56;BaseQRankSum=4.615;DP=392;FS=8.662;HRun=0;HaplotypeScore=64.3985;InbreedingCoeff=0.7205;MQ=60.52;MQ0=23;MQRankSum=-4.079;QD=8.00;ReadPosRankSum=0.686;VQSLOD=1.5638;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,1:16:36.40:319,36,0	0/0:8,0:8:21.05:0,21,341	0/0:31,0:13:1.58:0,2,210	0/1:28,0:13:7.73:8,0,33	0/0:12,0:12:20.62:0,21,212	0/0:11,0:11:21.02:0,21,255	0/0:19,0:18:47.37:0,47,587	0/0:21,0:20:53.87:0,54,624	0/0:6,0:6:5.97:0,6,75	0/0:12,0:9:15.04:0,15,221	0/0:13,0:11:23.46:0,23,280	1/1:10,0:10:14.90:136,15,0	1/1:8,1:8:14.95:129,15,0	0/0:15,0:15:38.13:0,38,545	0/0:10,0:10:29.79:0,30,391	0/0:6,0:6:15:0,15,205	0/0:31,0:31:52.07:0,52,676	1/1:8,14:20:15.02:157,15,0	0/0:14,0:12:32.44:0,32,413	0/0:9,0:7:15.04:0,15,200	0/0:14,0:11:23.96:0,24,262	1/1:9,0:6:14.98:130,15,0	1/1:7,0:6:12.01:112,12,0	0/1:13,1:13:19.89:160,0,20	0/0:9,0:8:15.04:0,15,215	0/0:13,0:10:18.73:0,19,216	0/0:9,0:9:18.02:0,18,229	0/0:8,0:6:5.94:0,6,40
chr10	73105291	.	CCGACTTG	C	1635.85	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=7.707;DP=433;FS=6.328;HRun=0;HaplotypeScore=99.9210;InbreedingCoeff=0.8038;MQ=60.15;MQ0=6;MQRankSum=-6.951;QD=18.80;ReadPosRankSum=0.984;VQSLOD=2.5537;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:14:21.07:479,21,0	0/0:9,0:9:21.07:0,21,811	0/1:12,0:11:34.19:34,0,943	0/0:20,0:17:39.02:0,39,1308	0/0:12,0:12:27.09:0,27,1003	0/0:12,0:12:30.10:0,30,932	0/0:28,0:28:81.28:0,81,3130	0/0:22,0:22:48.16:0,48,1771	0/0:10,0:10:12.17:0,12,463	0/0:15,0:15:39.13:0,39,1331	0/0:7,0:7:18.06:0,18,696	1/1:8,0:3:9.03:222,9,0	1/1:4,0:3:6.02:148,6,0	0/0:16,0:16:32.76:0,33,1255	0/0:13,0:13:27.09:0,27,1044	0/0:9,0:9:11.51:0,12,462	0/0:34,0:34:90.29:0,90,3301	1/1:4,11:14:12.04:296,12,0	0/0:16,0:15:42.14:0,42,1505	0/0:10,0:10:30.10:0,30,1156	0/0:51,0:50:99:0,135,5082	1/1:9,0:4:6:98,6,0	1/1:7,0:4:3.01:74,3,0	1/1:15,0:11:21.05:466,21,0	0/0:20,0:20:48.16:0,48,1805	0/0:21,0:21:51.18:0,51,1923	0/0:11,0:11:24.07:0,24,756	0/0:10,0:10:21.07:0,21,751
chr10	73105300	.	GA	G	189.38	PASS	AB=0.723;AC=10;AF=0.179;AN=56;BaseQRankSum=8.041;DP=450;FS=2.618;HRun=1;HaplotypeScore=61.5105;InbreedingCoeff=0.3993;MQ=60.07;MQ0=2;MQRankSum=-7.394;QD=2.37;ReadPosRankSum=1.839;VQSLOD=-0.6331;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:5,11:13:20.87:105,0,21	0/0:9,0:9:24.08:0,24,383	0/0:12,0:12:34.67:0,35,531	0/0:16,0:16:47.19:0,47,723	0/0:11,0:11:30.10:0,30,479	0/0:12,0:12:30.10:0,30,479	0/0:30,0:30:87.28:0,87,1367	0/0:23,0:23:60.18:0,60,914	0/0:12,0:12:17.88:0,18,285	0/0:15,0:15:39.13:0,39,614	0/0:7,0:7:21.07:0,21,336	1/1:1,8:4:8.71:48,9,0	0/1:4,3:6:18.39:18,0,79	0/0:17,0:17:36.09:0,36,575	0/0:17,0:17:30.10:0,30,480	0/0:11,0:11:11.50:0,11,191	0/0:33,0:33:93.29:0,93,1450	0/1:15,0:14:14.15:14,0,43	0/0:19,0:18:51.17:0,51,812	0/0:12,0:12:36.12:0,36,574	0/0:53,0:52:99:0,154,2441	1/1:4,7:5:5.90:40,6,0	1/1:2,5:4:2.88:15,3,0	0/1:5,10:11:19.06:92,0,19	0/0:21,0:21:57.19:0,57,906	0/0:20,0:20:60.20:0,60,953	0/0:12,0:11:30.09:0,30,455	0/0:8,0:8:24.08:0,24,384
chr10	73105303	.	TTGCGCA	T	759.40	PASS	AB=0.707;AC=9;AF=0.161;AN=56;BaseQRankSum=7.906;DP=465;FS=3.953;HRun=0;HaplotypeScore=99.4618;InbreedingCoeff=0.2095;MQ=59.93;MQ0=3;MQRankSum=-7.865;QD=9.04;ReadPosRankSum=2.144;VQSLOD=2.1625;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:6,11:14:71.05:279,0,71	0/0:9,0:9:24.08:0,24,876	0/0:12,0:12:36.06:0,36,1086	0/0:17,0:16:48.08:0,48,1446	0/0:12,0:12:33.10:0,33,1029	0/0:12,0:12:30.09:0,30,946	0/0:30,0:30:87.30:0,87,3131	0/0:21,0:21:63.20:0,63,1882	0/0:12,0:12:17.72:0,18,618	0/0:14,0:14:36.07:0,36,1130	0/0:8,0:8:24.08:0,24,813	0/1:5,8:8:19.07:137,0,19	0/1:4,3:6:21.12:88,0,21	0/0:17,0:17:35.91:0,36,1351	0/0:19,0:19:33.11:0,33,1177	0/0:14,0:14:17.17:0,17,576	0/0:33,0:33:90.30:0,90,3237	0/1:16,0:15:20.83:21,0,223	0/0:19,0:17:51.12:0,51,1548	0/0:12,0:12:36.12:0,36,1224	0/0:55,0:54:99:0,160,5483	0/1:4,7:5:37.70:41,0,38	1/1:1,5:3:3.01:49,3,0	1/1:4,10:10:3.60:280,4,0	0/0:21,0:21:54.19:0,54,1834	0/0:21,0:20:60.20:0,60,2150	0/0:12,0:11:30.09:0,30,1019	0/0:11,0:11:33.11:0,33,908
chr10	73106599	.	C	CGTGT	5580.79	PASS	AB=0.647;AC=13;AF=0.232;AN=56;BaseQRankSum=2.615;DP=705;FS=21.074;HRun=0;HaplotypeScore=148.2147;InbreedingCoeff=0.7092;MQ=59.65;MQ0=9;MQRankSum=-3.460;QD=23.16;ReadPosRankSum=2.999;VQSLOD=2.8681;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:41:60.23:377,60,0	0/0:5,0:6:6.02:0,6,99	0/0:30,0:12:6.01:0,6,70	0/0:20,0:11:4.97:0,5,53	0/0:16,0:17:35.87:0,36,548	0/0:15,0:15:36.11:0,36,571	0/0:43,0:46:96.30:0,96,1505	0/0:28,0:28:24.79:0,25,530	0/0:11,0:14:39.10:0,39,548	0/0:21,0:23:47.85:0,48,675	0/0:22,0:22:25.62:0,26,351	1/1:21,16:38:68.89:1346,69,0	1/1:10,7:19:35.48:572,35,0	0/0:20,0:20:45.15:0,45,729	0/0:23,0:23:57.19:0,57,939	0/0:30,0:30:48.16:0,48,770	0/1:8,0:27:6.54:135,0,7	1/1:21,0:21:24.11:661,24,0	0/0:21,0:20:22.57:0,23,359	0/0:9,0:9:15.05:0,15,241	0/0:58,0:60:99:0,108,1825	0/1:13,11:25:1.45:739,0,1	1/1:16,10:27:32.55:601,33,0	0/1:22,20:42:36.03:1149,0,36	0/0:18,0:18:24.08:0,24,370	0/0:22,0:23:42.13:0,42,640	0/0:17,0:21:39.10:0,39,535	0/0:11,0:15:33.08:0,33,434
chr10	73106646	.	ACCCG	A	5970.15	PASS	AB=0.742;AC=20;AF=0.357;AN=56;BaseQRankSum=12.290;DP=560;FS=8.390;HRun=0;HaplotypeScore=120.1552;InbreedingCoeff=0.8919;MQ=58.31;MQ0=2;MQRankSum=-5.172;QD=24.57;ReadPosRankSum=6.376;VQSLOD=3.4583;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,26:34:41.94:712,42,0	0/0:8,0:8:21.01:0,21,298	0/0:7,0:2:3:0,3,25	0/1:17,0:6:1.01:1,0,110	0/0:22,0:22:51.08:0,51,1035	0/0:14,0:14:42.09:0,42,817	0/0:41,0:41:99:0,120,2436	0/0:19,0:19:50.91:0,51,623	0/0:15,0:15:34.82:0,35,671	1/1:0,28:28:69.16:1259,69,0	1/1:1,13:14:15.05:300,15,0	1/1:8,30:38:63.02:1176,63,0	1/1:5,10:15:24.01:381,24,0	0/0:16,0:16:44.71:0,45,658	0/0:22,0:22:66.15:0,66,1261	0/0:13,0:13:36.08:0,36,721	0/0:21,0:21:57.10:0,57,1130	1/1:3,19:22:48.08:870,48,0	0/0:21,0:21:63.15:0,63,1268	0/0:6,0:6:16.66:0,17,217	0/0:51,0:51:99:0,150,2968	1/1:3,9:12:15:299,15,0	0/1:3,8:11:0:0,0,0	1/1:9,25:34:42.97:733,43,0	1/1:1,15:16:12.04:240,12,0	0/0:18,0:18:45.04:0,45,761	0/0:10,0:10:26.94:0,27,448	0/0:13,0:13:33.04:0,33,593
chr10	73107065	.	AACCGCACAGTT	A	551.52	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.719;DP=707;FS=5.415;HRun=0;HaplotypeScore=214.1733;InbreedingCoeff=0.9800;MQ=82.52;MQ0=0;MQRankSum=-2.520;QD=42.42;ReadPosRankSum=-0.253;VQSLOD=3.0116;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,7059	0/0:16,0:16:45.14:0,45,2159	0/0:28,0:27:75.24:0,75,3449	0/0:16,0:16:16.24:0,16,1717	0/0:25,0:25:72.19:0,72,3774	0/0:22,0:22:66.17:0,66,3310	0/0:16,0:16:48.16:0,48,2633	0/0:39,0:39:99:0,114,6350	0/0:29,0:29:84.28:0,84,4577	0/0:29,0:29:87.26:0,87,4639	0/0:19,0:19:54.19:0,54,3085	0/0:32,0:32:93.30:0,93,5006	0/0:22,0:22:63.14:0,63,3242	0/0:24,0:24:72.24:0,72,3876	0/0:37,0:37:99:0,111,6005	0/0:27,0:27:78.24:0,78,4039	0/0:34,0:34:99:0,99,5208	1/1:0,13:13:18.06:642,18,0	0/0:17,0:17:42.14:0,42,2413	0/0:19,0:19:57.20:0,57,2948	0/0:30,0:30:84.29:0,84,4662	0/0:25,0:25:66.22:0,66,3509	0/0:16,0:16:48.16:0,48,2717	0/0:30,0:30:90.30:0,90,4977	0/0:27,0:27:72.25:0,72,4017	0/0:26,0:26:77.07:0,77,4152	0/0:25,0:25:75.17:0,75,3970	0/0:22,0:22:66.23:0,66,3805
chr10	73108677	.	G	GA	1130.56	PASS	AB=0.815;AC=12;AF=0.222;AN=54;BaseQRankSum=4.043;DP=470;FS=0.000;HRun=11;HaplotypeScore=74.3198;InbreedingCoeff=0.6332;MQ=50.27;MQ0=19;MQRankSum=-4.668;QD=9.27;ReadPosRankSum=-0.119;VQSLOD=2.5570;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,16:28:48.26:446,48,0	0/0:10,0:12:19.91:0,20,145	0/1:4,0:5:7.07:7,0,9	./.	0/0:23,0:23:26.78:0,27,207	0/0:22,0:22:47.72:0,48,356	0/0:22,0:21:13.39:0,13,236	0/0:22,0:21:37.86:0,38,283	0/0:15,0:15:14.86:0,15,116	0/0:10,0:10:23.89:0,24,183	0/0:21,0:21:29.81:0,30,232	0/1:10,2:12:1.28:68,0,1	1/1:7,8:15:6.90:237,7,0	0/0:15,0:15:14.78:0,15,115	0/0:17,0:16:29.79:0,30,229	0/0:20,0:18:6.39:0,6,145	0/0:27,2:26:17.26:0,17,315	0/1:11,10:16:5.20:134,0,5	0/0:22,0:20:44.79:0,45,348	0/0:18,1:18:35.75:0,36,271	0/0:5,0:4:8.97:0,9,70	1/1:9,6:13:20.96:192,21,0	0/1:10,5:15:5.30:118,0,5	1/1:6,4:7:9.02:90,9,0	0/0:13,0:13:20.87:0,21,162	0/0:20,0:20:33.89:0,34,237	0/0:19,0:20:22.84:0,23,167	0/0:12,0:11:23.87:0,24,182
chr10	73108696	.	G	GA	966.76	PASS	AB=0.902;AC=16;AF=0.286;AN=56;BaseQRankSum=0.695;DP=480;FS=6.523;HRun=11;HaplotypeScore=63.5855;InbreedingCoeff=0.5578;MQ=56.21;MQ0=16;MQRankSum=-1.242;QD=5.14;ReadPosRankSum=-1.379;VQSLOD=1.0317;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:10,23:34:48.40:472,48,0	0/0:12,0:12:20.89:0,21,163	0/0:21,0:13:14.41:0,14,134	0/1:12,0:8:13.13:13,0,13	0/0:22,0:22:50.77:0,51,395	0/1:17,1:18:6.50:6,0,297	0/0:21,0:22:39.87:0,40,290	0/0:22,0:22:35.31:0,35,262	0/0:13,0:13:26.83:0,27,204	0/0:12,0:12:17.89:0,18,139	0/0:14,0:16:31.74:0,32,226	1/1:4,9:13:15.03:152,15,0	1/1:7,8:15:11.97:111,12,0	0/0:10,0:10:20.22:0,20,149	0/0:15,0:14:32.85:0,33,255	0/0:13,0:11:29.88:0,30,232	0/0:28,1:28:25.56:0,26,372	0/0:23,0:19:35.84:0,36,277	0/1:28,2:29:4.18:4,0,332	0/1:12,1:13:3.57:4,0,159	0/0:7,0:7:7.27:0,7,126	1/1:6,11:16:18.01:173,18,0	0/1:7,7:13:4.13:114,0,4	1/1:2,6:6:9.02:91,9,0	0/0:14,0:14:38.82:0,39,299	0/0:21,0:20:38.81:0,39,302	0/0:14,0:15:16.59:0,17,137	0/1:12,1:13:0.56:1,0,179
chr10	73109224	.	CTG	C	5369.58	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.521;DP=1307;FS=36.652;HRun=0;HaplotypeScore=182.7497;InbreedingCoeff=0.9855;MQ=50.59;MQ0=36;MQRankSum=2.289;QD=18.14;ReadPosRankSum=1.623;VQSLOD=3.3508;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:37,45:71:89.94:1069,90,0	0/0:17,0:17:43.22:0,43,620	0/0:49,0:19:36.08:0,36,515	0/0:42,0:13:25.64:0,26,292	0/0:31,0:25:44.92:0,45,637	0/0:26,0:26:48.14:0,48,754	0/0:41,0:35:72.21:0,72,1147	0/0:56,0:46:99:0,114,1718	0/0:53,0:51:99:0,111,1714	0/0:55,0:51:99:0,135,2060	0/0:30,0:26:42.13:0,42,676	1/1:19,33:45:90.14:1062,90,0	1/1:13,20:27:57.61:684,58,0	0/0:57,0:53:99:0,102,1640	0/0:52,0:51:99:0,129,1998	0/0:55,0:54:99:0,121,1948	0/0:44,1:40:43.09:0,43,1184	0/0:45,1:39:27.26:0,27,1191	0/0:43,0:26:64.02:0,64,982	0/0:36,1:35:8.23:0,8,1097	0/0:144,1:128:99:0,256,4060	1/1:12,20:29:41.58:676,42,0	1/1:6,15:20:36.12:457,36,0	1/1:30,46:67:99:1422,117,0	0/0:21,0:17:27.34:0,27,494	0/0:48,0:44:99:0,117,1775	0/0:37,0:36:84.06:0,84,1332	0/0:23,0:23:54.18:0,54,880
chr10	73109370	.	CTG	C	1625.68	PASS	AB=0.861;AC=11;AF=0.212;AN=52;BaseQRankSum=6.058;DP=2453;DS;FS=0.470;HRun=0;HaplotypeScore=278.8171;InbreedingCoeff=0.1463;MQ=30.41;MQ0=442;MQRankSum=-2.805;QD=2.08;ReadPosRankSum=2.800;VQSLOD=2.1736;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:123,15:79:53.36:53,0,172	0/0:26,0:19:21.05:0,21,314	./.	./.	0/0:67,1:42:45.14:0,45,697	0/0:73,2:51:32.82:0,33,703	0/0:169,3:60:75.59:0,76,1202	0/0:106,0:12:30.10:0,30,492	0/0:114,4:75:80.57:0,81,1557	0/1:87,16:50:99:578,0,323	1/1:33,7:20:6.02:78,6,0	0/1:81,25:60:99:369,0,241	0/1:76,16:41:99:138,0,408	0/0:97,3:60:99:0,100,1548	0/0:105,0:58:79:0,79,1182	0/0:98,1:65:99:0,118,1659	0/0:148,6:98:99:0,114,2130	0/0:68,1:51:11.61:0,12,922	0/0:67,0:30:65.43:0,65,963	0/0:50,0:28:34.27:0,34,513	0/0:248,2:148:99:0,170,2642	0/1:50,3:27:32.52:33,0,34	1/1:29,13:26:12.03:142,12,0	0/1:113,30:87:40.24:208,0,40	0/1:49,12:43:18.65:177,0,19	0/0:102,3:57:87.88:0,88,1633	0/0:69,0:50:71.01:0,71,1056	0/0:26,0:19:27.96:0,28,424
chr10	73109380	.	GTC	G	626.38	PASS	AB=0.989;AC=12;AF=0.231;AN=52;BaseQRankSum=8.573;DP=2488;DS;FS=4.568;HRun=0;HaplotypeScore=292.7260;InbreedingCoeff=0.1202;MQ=29.61;MQ0=483;MQRankSum=-3.321;QD=0.72;ReadPosRankSum=-0.771;VQSLOD=1.9094;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:140,0:75:6.97:7,0,202	0/0:26,1:21:20.31:0,20,310	./.	./.	0/0:64,0:37:37.06:0,37,601	0/0:69,1:45:41.94:0,42,781	0/0:170,1:59:74.91:0,75,1193	0/0:116,0:12:33.03:0,33,553	0/0:120,0:75:99:0,106,1694	0/1:104,2:48:99:283,0,381	1/1:44,0:23:8.66:50,9,0	0/1:110,2:62:99:172,0,277	0/1:93,1:41:31.02:31,0,429	0/0:104,1:64:90.37:0,90,1681	0/0:101,2:58:58.11:0,58,1189	0/0:100,1:63:98.36:0,98,1804	0/0:161,1:102:88.96:0,89,2593	0/1:68,3:48:31.67:32,0,1007	0/0:81,0:30:43.24:0,43,992	0/0:47,0:26:35.77:0,36,568	0/0:249,0:142:99:0,175,2772	0/1:56,0:29:7.84:8,0,51	1/1:45,0:26:11.47:72,11,0	0/1:142,0:83:56.06:69,0,56	0/1:62,0:43:30.54:55,0,31	0/0:104,0:54:50.18:0,50,1856	0/0:67,0:48:61.81:0,62,1051	0/0:28,0:21:24.84:0,25,526
chr10	73109610	.	GTC	G	152.24	PASS	AB=0.990;AC=10;AF=0.200;AN=50;BaseQRankSum=6.469;DP=2370;DS;FS=0.000;HRun=0;HaplotypeScore=222.1107;InbreedingCoeff=0.1489;MQ=27.62;MQ0=410;MQRankSum=-3.681;QD=0.21;ReadPosRankSum=-6.322;VQSLOD=0.5966;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:135,1:63:18.03:18,0,30	0/0:11,0:7:7.84:0,8,121	./.	./.	0/0:57,0:36:12.02:0,12,149	0/0:74,0:49:53:0,53,859	0/0:174,0:65:74.83:0,75,1229	0/0:105,0:13:33.03:0,33,502	0/0:115,0:59:47.73:0,48,1144	0/1:94,0:45:83.42:83,0,688	./.	0/1:108,0:62:20.54:21,0,95	0/1:84,2:51:53.55:54,0,204	0/0:107,0:70:67.88:0,68,1301	0/0:96,0:56:48.61:0,49,971	0/0:92,0:55:79.11:0,79,1364	0/0:140,1:98:99:0,103,2212	0/1:58,1:38:5.78:6,0,544	0/0:63,0:24:62.89:0,63,811	0/0:62,0:47:45.62:0,46,684	0/0:243,0:147:99:0,147,2413	0/0:70,0:38:3.01:0,3,58	1/1:54,0:31:2.99:23,3,0	1/1:119,0:57:9.42:66,9,0	0/1:73,0:46:14.87:18,0,15	0/0:120,0:67:99:0,134,2571	0/0:53,0:39:72.85:0,73,1238	0/0:16,0:10:8.98:0,9,115
chr10	73109612	.	C	CTG	1226.34	PASS	AB=0.933;AC=13;AF=0.260;AN=50;BaseQRankSum=2.765;DP=2349;DS;FS=6.429;HRun=0;HaplotypeScore=224.7626;InbreedingCoeff=0.2905;MQ=27.75;MQ0=405;MQRankSum=-5.055;QD=1.65;ReadPosRankSum=-5.656;VQSLOD=0.3640;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:129,3:64:1.28:43,1,0	0/0:12,0:8:6.02:0,6,75	./.	./.	0/0:56,0:36:9.50:0,9,108	0/0:75,0:50:40.55:0,41,532	0/0:169,0:64:66.03:0,66,734	0/0:106,0:13:21.06:0,21,255	0/0:110,0:58:12.11:0,12,670	0/1:86,8:47:99:668,0,201	./.	0/1:90,17:62:13.07:234,0,13	0/1:72,12:50:83.70:131,0,84	0/0:100,0:68:67.98:0,68,881	0/0:97,1:58:50.54:0,51,636	0/0:93,0:56:80.67:0,81,961	0/0:133,0:94:99:0,130,1574	0/1:60,0:38:10.53:11,0,266	0/0:62,0:24:47.84:0,48,541	0/0:63,0:48:41.93:0,42,471	0/0:243,0:148:99:0,135,1647	0/0:64,6:38:3.01:0,3,38	1/1:51,2:30:2.99:23,3,0	1/1:115,2:57:15.03:207,15,0	1/1:56,14:44:3.46:26,3,0	0/0:120,0:67:99:0,126,1678	0/0:50,0:37:69.01:0,69,822	0/1:16,0:10:31.44:31,0,31
chr10	73109755	.	C	CGTGT	3539.30	PASS	AB=0.885;AC=17;AF=0.304;AN=56;BaseQRankSum=0.298;DP=1042;FS=7.635;HRun=0;HaplotypeScore=196.6251;InbreedingCoeff=0.5889;MQ=45.52;MQ0=36;MQRankSum=1.103;QD=11.38;ReadPosRankSum=-2.174;VQSLOD=2.2449;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:53.67:0,54,694	0/0:8,0:8:8.15:0,8,132	0/0:37,0:3:3.01:0,3,42	0/0:45,0:5:3.01:0,3,48	0/0:23,0:22:18.04:0,18,233	0/0:19,0:17:15.50:0,15,206	0/0:54,0:50:1.41:0,1,637	0/0:37,0:34:11.65:0,12,407	0/0:43,0:35:23.82:0,24,551	1/1:27,2:26:27.05:404,27,0	1/1:20,0:18:5.02:95,5,0	0/1:28,9:33:8.65:599,0,9	1/1:32,7:38:24.12:666,24,0	0/0:40,0:39:50.40:0,50,666	0/0:39,0:38:48.79:0,49,762	0/0:38,0:37:26.09:0,26,605	0/0:61,0:57:29.93:0,30,1124	1/1:34,0:29:21.35:263,21,0	0/0:22,0:17:15.32:0,15,234	0/1:20,0:18:70.61:71,0,83	0/0:123,0:110:77.33:0,77,931	1/1:23,1:21:11.28:123,11,0	1/1:13,1:14:16.83:211,17,0	0/1:54,7:59:29.77:832,0,30	1/1:20,2:22:14.53:277,15,0	0/0:33,0:32:7.05:0,7,437	0/0:24,0:22:20.53:0,21,279	0/0:13,0:13:3.34:0,3,245
chr10	73110594	.	TGG	T	4673.69	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=6.801;DP=530;FS=7.693;HRun=11;HaplotypeScore=70.9768;InbreedingCoeff=0.9374;MQ=78.26;MQ0=2;MQRankSum=0.325;QD=25.26;ReadPosRankSum=6.925;VQSLOD=4.2427;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:63.16:671,63,0	0/0:6,0:6:18.03:0,18,232	0/0:26,0:23:37.97:0,38,375	0/0:17,0:14:2.97:0,3,186	0/0:16,0:19:32.58:0,33,449	0/0:25,0:25:40.34:0,40,538	0/0:25,0:25:50.81:0,51,738	0/0:25,0:25:19.60:0,20,253	0/0:21,0:21:27.07:0,27,374	1/1:6,15:21:45.02:470,45,0	1/1:2,12:14:36.09:383,36,0	1/1:2,14:16:36.07:383,36,0	1/1:3,22:25:69.15:731,69,0	0/0:12,0:14:3.24:0,3,266	0/0:18,0:18:25.57:0,26,353	0/0:23,0:23:36.11:0,36,530	0/0:24,0:24:48.15:0,48,718	1/1:3,18:21:45.09:479,45,0	0/0:16,0:17:35.57:0,36,439	0/0:16,0:16:30.06:0,30,399	0/0:15,0:13:18.02:0,18,250	1/1:4,11:15:30.06:319,30,0	1/1:3,17:20:10.79:441,11,0	1/1:1,10:11:30.07:319,30,0	1/1:2,16:17:45.11:479,45,0	0/0:22,0:24:35.55:0,36,489	0/0:23,0:24:38.59:0,39,520	0/0:6,0:6:15.04:0,15,206
chr10	73113922	.	C	CAT	1059.77	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.750;DP=786;FS=1.721;HRun=0;HaplotypeScore=94.3915;InbreedingCoeff=0.9939;MQ=85.84;MQ0=0;MQRankSum=-2.061;QD=44.16;ReadPosRankSum=0.726;VQSLOD=5.2061;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.30:0,90,1289	0/0:10,0:10:24.08:0,24,344	0/0:31,0:31:51.27:0,51,924	0/0:29,0:30:56.46:0,56,925	0/0:26,0:26:78.18:0,78,1054	0/0:30,0:30:81.27:0,81,1159	0/0:22,0:22:60.20:0,60,852	0/0:45,0:44:99:0,111,1572	0/0:26,0:26:72.24:0,72,1031	0/0:23,0:23:66.22:0,66,946	0/0:14,0:14:42.14:0,42,602	0/0:37,0:37:99:0,111,1553	0/0:31,0:31:87.24:0,87,1190	0/0:39,0:39:99:0,108,1547	0/0:39,0:39:99:0,108,1545	0/0:31,0:31:87.28:0,87,1226	0/0:26,0:26:78.23:0,78,1095	1/1:1,23:24:63.22:1155,63,0	0/0:35,0:35:93.31:0,93,1330	0/0:25,0:25:75.23:0,75,1054	0/0:37,0:37:99:0,102,1397	0/0:34,0:34:90.29:0,90,1289	0/0:23,0:23:66.19:0,66,905	0/0:29,0:29:79.49:0,79,1097	0/0:23,0:23:66.20:0,66,926	0/0:35,0:35:99:0,99,1396	0/0:23,0:23:69.21:0,69,969	0/0:7,0:7:21.05:0,21,281
chr10	73120399	.	GAAC	G	656.74	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.285;DP=588;FS=5.069;HRun=0;HaplotypeScore=80.7600;InbreedingCoeff=0.9802;MQ=72.81;MQ0=0;MQRankSum=-4.153;QD=36.49;ReadPosRankSum=0.490;VQSLOD=4.0276;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.19:0,60,1292	0/0:7,0:7:21.05:0,21,422	0/0:8,0:8:21.07:0,21,425	0/0:10,0:10:21.07:0,21,407	0/0:29,0:29:75.26:0,75,1648	0/0:31,0:31:93.30:0,93,2021	0/0:19,0:19:51.18:0,51,1136	0/0:46,0:46:99:0,132,2803	0/0:18,0:18:51.18:0,51,1115	0/0:30,0:30:84.28:0,84,1834	0/0:29,0:29:84.29:0,84,1832	0/0:18,0:18:54.19:0,54,1200	0/0:20,0:20:57.20:0,57,1263	0/0:15,0:15:42.14:0,42,916	0/0:32,0:32:96.32:0,96,2099	0/0:21,0:21:60.18:0,60,1221	0/0:25,0:25:69.24:0,69,1486	1/1:0,18:18:48.10:752,48,0	0/0:19,0:19:57.18:0,57,1173	0/0:24,0:24:72.25:0,72,1607	0/0:24,0:24:69.22:0,69,1473	0/0:18,0:18:54.19:0,54,1203	0/0:17,0:17:45.14:0,45,963	0/0:6,0:6:18.06:0,18,402	0/0:25,0:25:69.24:0,69,1540	0/0:14,0:14:42.14:0,42,924	0/0:27,0:27:81.28:0,81,1757	0/0:18,0:18:54.19:0,54,1188
chr10	73122060	.	T	TAGAGGC	408.40	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.635;DP=597;FS=0.000;HRun=0;HaplotypeScore=122.1173;InbreedingCoeff=0.8743;MQ=69.88;MQ0=0;MQRankSum=-3.555;QD=31.42;ReadPosRankSum=-0.877;VQSLOD=3.2874;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:9.74:0,10,820	0/0:9,0:9:24.08:0,24,508	0/0:18,0:13:11.90:0,12,224	0/0:26,0:21:17.93:0,18,629	0/0:29,0:29:48.15:0,48,958	0/0:22,0:22:36.12:0,36,744	0/0:9,0:9:15.05:0,15,317	0/0:30,0:30:33.11:0,33,682	0/0:22,0:22:51.18:0,51,1080	0/0:18,0:18:36.11:0,36,676	0/0:26,0:26:54.14:0,54,1100	0/0:23,0:23:51.15:0,51,1003	0/0:19,0:19:51.16:0,51,1022	0/0:23,0:23:60.21:0,60,1252	0/0:26,0:26:66.23:0,66,1397	0/0:30,0:30:78.27:0,78,1624	0/0:26,0:26:42.10:0,42,754	1/1:8,5:13:15.05:497,15,0	0/0:22,0:22:33.09:0,33,622	0/0:27,0:27:51.16:0,51,1040	0/0:17,0:17:36.12:0,36,732	0/0:23,0:23:36.11:0,36,724	0/0:27,0:27:36.12:0,36,747	0/0:15,0:15:21.07:0,21,445	0/0:13,0:13:24.08:0,24,490	0/0:12,0:12:21.07:0,21,444	0/0:34,0:33:84.27:0,84,1714	0/0:9,0:9:21.07:0,21,445
chr10	73126227	.	A	AACC	96.06	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.722;DP=546;FS=0.000;HRun=0;HaplotypeScore=80.2169;InbreedingCoeff=0.8755;MQ=62.49;MQ0=6;MQRankSum=-1.468;QD=8.73;ReadPosRankSum=0.085;VQSLOD=2.3866;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:63.17:0,63,840	0/0:11,0:11:15.05:0,15,200	0/0:29,0:15:21.07:0,21,275	0/0:19,0:15:18.05:0,18,224	0/0:19,0:19:45.12:0,45,600	0/0:15,0:15:30.10:0,30,412	0/0:22,0:22:30.09:0,30,397	0/0:27,0:26:38.71:0,39,490	0/0:27,0:28:57.12:0,57,732	0/0:16,0:16:24.07:0,24,314	0/0:11,0:11:24.08:0,24,332	0/0:23,0:23:42.12:0,42,562	0/0:24,0:24:66.18:0,66,873	0/0:20,0:20:42.14:0,42,575	0/0:34,0:34:69.23:0,69,949	0/0:18,0:18:48.16:0,48,662	0/0:22,0:22:48.14:0,48,646	1/1:6,5:11:9.50:180,10,0	0/0:15,0:15:18.94:0,19,236	0/0:17,0:17:30.10:0,30,415	0/0:21,0:21:42.14:0,42,575	0/0:15,0:15:33.11:0,33,455	0/0:13,0:13:24.08:0,24,330	0/0:20,0:20:42.13:0,42,563	0/0:15,0:15:27.09:0,27,373	0/0:16,0:16:27.09:0,27,371	0/0:25,0:25:57.19:0,57,781	0/0:6,0:6:12.04:0,12,166
chr10	73127271	.	AAAC	A	1799.66	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.095;DP=396;FS=13.190;HRun=0;HaplotypeScore=70.3910;InbreedingCoeff=0.9014;MQ=62.57;MQ0=1;MQRankSum=-6.379;QD=32.14;ReadPosRankSum=0.444;VQSLOD=2.9601;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.10:0,39,707	0/0:5,0:5:15.02:0,15,233	0/0:26,0:9:1.57:0,2,139	0/0:28,0:12:17.67:0,18,123	0/0:24,0:24:64.60:0,65,1010	0/0:17,0:17:50.65:0,51,698	0/0:5,0:5:15.04:0,15,267	0/0:36,0:36:66.20:0,66,1262	0/0:6,0:6:15.01:0,15,207	1/1:7,7:14:39.10:561,39,0	1/1:9,8:17:41.82:455,42,0	0/0:13,0:13:36.06:0,36,556	0/0:5,0:5:15.01:0,15,190	0/0:12,0:12:33.09:0,33,595	0/0:12,0:12:36.01:0,36,541	0/0:6,0:6:18:0,18,280	0/0:24,0:24:58.40:0,58,1202	1/1:8,2:10:25.70:262,26,0	0/0:20,0:19:56.55:0,57,848	0/0:16,0:16:44.32:0,44,739	0/0:4,0:4:12.03:0,12,173	0/0:5,0:5:15.05:0,15,293	0/0:8,0:8:21.03:0,21,350	0/0:4,0:4:12.02:0,12,181	1/1:2,13:14:42.14:680,42,0	0/0:16,0:16:41.65:0,42,777	0/0:20,0:20:60.10:0,60,964	0/0:14,0:14:42.12:0,42,800
chr10	73127291	.	AT	A	787.10	PASS	AB=0.805;AC=10;AF=0.179;AN=56;BaseQRankSum=6.920;DP=437;FS=0.512;HRun=14;HaplotypeScore=69.0443;InbreedingCoeff=0.3934;MQ=63.94;MQ0=5;MQRankSum=-3.842;QD=7.22;ReadPosRankSum=-0.546;VQSLOD=2.4475;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:38.97:0,39,352	0/1:4,1:5:5.57:6,0,96	0/0:38,0:12:8.23:0,8,48	0/1:31,0:11:17.81:18,0,35	0/0:24,1:26:31.76:0,32,383	0/0:17,2:20:18.72:0,19,439	0/0:6,0:6:15.02:0,15,139	0/0:31,2:32:6.56:0,7,333	0/0:2,0:3:5.84:0,6,43	1/1:6,8:14:22.64:149,23,0	1/1:2,15:18:43.68:293,44,0	0/0:9,0:11:29.69:0,30,246	0/0:6,0:6:9.01:0,9,83	0/0:13,0:14:32.89:0,33,277	0/0:13,0:14:19.98:0,20,201	0/1:9,2:10:11.14:11,0,192	0/0:25,1:27:25.20:0,25,491	0/1:3,8:12:23.86:138,0,24	0/0:18,2:20:0.87:0,1,291	0/0:12,1:14:6.28:0,6,189	0/0:1,0:2:2.84:0,3,14	0/0:5,0:5:15.02:0,15,139	0/0:10,0:11:28.67:0,29,221	0/0:6,0:6:12.48:0,12,112	1/1:1,16:16:47.57:327,48,0	0/0:16,0:17:25.71:0,26,247	0/0:19,1:21:33.22:0,33,417	0/0:14,1:16:7.71:0,8,166
chr10	73127930	.	C	CA	919.92	PASS	AB=0.897;AC=17;AF=0.304;AN=56;BaseQRankSum=-0.413;DP=452;FS=25.431;HRun=13;HaplotypeScore=59.1806;InbreedingCoeff=0.3906;MQ=54.99;MQ0=16;MQRankSum=0.458;QD=5.23;ReadPosRankSum=0.889;VQSLOD=0.3953;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:11,14:24:19.85:248,0,20	0/1:6,0:5:0:0,0,0	0/0:7,0:4:6.77:0,7,41	0/1:9,0:7:9.79:10,0,18	0/1:17,3:21:46.63:47,0,135	0/0:11,0:11:22.26:0,22,137	0/0:18,0:16:37.36:0,37,235	0/0:20,0:22:30:0,30,227	0/0:14,0:14:7.11:0,7,180	0/0:14,0:15:33.31:0,33,205	0/1:15,0:15:6.35:6,0,120	0/1:9,4:13:9.38:150,0,9	1/1:4,12:16:13.57:115,14,0	0/0:17,0:16:36.95:0,37,232	0/0:17,1:19:12.25:0,12,202	0/0:17,0:17:41.94:0,42,262	0/0:21,0:22:47.25:0,47,292	1/1:8,5:13:22.77:203,23,0	0/1:18,0:18:10.84:11,0,147	0/0:19,0:20:9.85:0,10,204	0/0:8,0:9:22.07:0,22,136	1/1:4,2:6:6.01:56,6,0	1/1:7,11:19:3.27:161,3,0	1/1:5,6:9:9.01:84,9,0	0/0:24,0:24:33.98:0,34,225	0/0:13,1:15:8.88:0,9,188	0/0:20,1:21:47.56:0,48,281	0/0:16,0:15:27.35:0,27,174
chr10	73130364	.	GACAT	G	8243.05	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.831;DP=756;FS=2.982;HRun=0;HaplotypeScore=124.9100;InbreedingCoeff=0.9983;MQ=83.48;MQ0=0;MQRankSum=-5.920;QD=56.85;ReadPosRankSum=3.638;VQSLOD=6.2435;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:36.12:729,36,0	0/0:8,0:8:24.08:0,24,695	0/0:27,0:27:50.16:0,50,1963	0/0:18,0:18:54.11:0,54,1260	0/0:29,0:29:87.28:0,87,2365	0/0:31,0:31:93.31:0,93,2582	0/0:30,0:30:87.23:0,87,2451	0/0:35,0:35:99:0,105,2746	0/0:23,0:23:69.19:0,69,1741	0/0:30,0:30:90.30:0,90,2551	0/0:21,0:21:63.22:0,63,1825	1/1:1,32:33:90.31:1846,90,0	1/1:0,28:28:78.27:1628,78,0	0/0:34,0:34:99:0,102,2768	0/0:48,0:48:99:0,144,4007	0/0:30,0:30:90.31:0,90,2571	0/0:16,0:16:48.16:0,48,1390	0/0:8,0:8:24.08:0,24,686	0/0:21,0:21:63.22:0,63,1819	0/0:40,0:40:99:0,120,3436	0/0:46,0:46:99:0,138,3981	1/1:1,30:31:90.31:1853,90,0	1/1:0,19:19:57.20:1183,57,0	1/1:0,20:20:48.07:1005,48,0	0/0:30,0:30:90.29:0,90,2495	0/0:42,0:42:99:0,126,3554	0/0:37,0:37:99:0,111,3147	0/0:7,0:7:21.07:0,21,567
chr10	73135449	.	CTTAA	C	800.59	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.946;DP=669;FS=0.965;HRun=0;HaplotypeScore=101.0225;InbreedingCoeff=0.9947;MQ=75.81;MQ0=0;MQRankSum=-3.197;QD=42.14;ReadPosRankSum=3.062;VQSLOD=3.8898;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,2720	0/0:9,0:9:24.07:0,24,585	0/0:8,0:8:24.08:0,24,583	0/0:18,0:18:54.18:0,54,1282	0/0:33,0:33:90.25:0,90,2263	0/0:27,0:27:81.22:0,81,1941	0/0:11,0:11:30.10:0,30,772	0/0:46,0:46:99:0,123,3104	0/0:25,0:25:72.25:0,72,1921	0/0:39,0:39:99:0,117,3020	0/0:28,0:28:78.24:0,78,1900	0/0:21,0:21:60.21:0,60,1601	0/0:21,0:21:63.22:0,63,1668	0/0:29,0:29:81.26:0,81,2094	0/0:25,0:25:75.26:0,75,1952	0/0:25,0:25:72.23:0,72,1856	0/0:27,0:27:81.28:0,81,2127	1/1:0,19:19:48.16:895,48,0	0/0:16,0:16:45.13:0,45,1066	0/0:27,0:27:81.26:0,81,2077	0/0:20,0:20:54.15:0,54,1281	0/0:18,0:18:48.13:0,48,1221	0/0:14,0:14:36.10:0,36,892	0/0:13,0:13:39.12:0,39,984	0/0:25,0:25:75.26:0,75,2001	0/0:37,0:37:99:0,105,2710	0/0:42,0:42:99:0,120,3201	0/0:11,0:11:30.10:0,30,766
chr10	73136207	.	G	GTA	1240.65	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-5.457;DP=311;FS=11.942;HRun=0;HaplotypeScore=36.4475;InbreedingCoeff=0.8630;MQ=74.55;MQ0=1;MQRankSum=-1.114;QD=32.65;ReadPosRankSum=1.775;VQSLOD=4.8094;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.14:0,45,573	0/0:6,0:6:12.02:0,12,139	0/0:6,0:5:6.01:0,6,67	0/0:12,0:9:7.82:0,8,82	0/0:12,0:12:33.11:0,33,420	0/0:17,0:17:48.13:0,48,596	0/0:4,0:4:9.03:0,9,115	0/0:36,0:36:81.25:0,81,1020	0/0:8,0:8:21.07:0,21,267	1/1:1,10:12:33.10:528,33,0	1/1:0,7:8:21.07:351,21,0	0/0:11,0:11:30.09:0,30,369	0/0:6,0:6:18.06:0,18,229	0/0:7,0:7:18.03:0,18,202	0/0:6,0:6:15.05:0,15,191	0/0:12,0:12:30.10:0,30,382	0/0:18,0:18:42.11:0,42,518	0/0:10,0:10:20.49:0,20,266	0/0:12,0:12:33.08:0,33,393	0/0:7,0:7:21.06:0,21,255	0/0:10,0:10:24.08:0,24,306	0/0:3,0:3:9.03:0,9,115	0/0:5,0:5:12.04:0,12,153	0/0:5,0:5:15.05:0,15,190	1/1:2,16:17:30.10:502,30,0	0/0:12,0:12:24.06:0,24,291	0/0:18,0:17:51.16:0,51,649	0/0:14,0:14:39.12:0,39,497
chr10	73136513	.	T	TA	338.35	PASS	AB=0.889;AC=3;AF=0.054;AN=56;BaseQRankSum=-2.509;DP=483;FS=0.960;HRun=9;HaplotypeScore=47.7757;InbreedingCoeff=0.6026;MQ=71.64;MQ0=0;MQRankSum=0.835;QD=14.10;ReadPosRankSum=-0.043;VQSLOD=3.1511;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:98.93:0,99,851	0/0:5,0:5:12:0,12,104	0/0:10,0:9:11.61:0,12,77	0/0:8,0:8:8.23:0,8,91	0/0:18,0:19:52.98:0,53,439	0/0:17,1:18:14.77:0,15,350	0/0:10,0:10:23.97:0,24,206	0/0:28,0:28:56.95:0,57,490	0/0:23,0:23:65.96:0,66,566	0/0:25,0:26:73.39:0,73,611	0/0:13,0:13:35.98:0,36,308	0/0:11,0:11:32.98:0,33,283	0/0:13,0:13:35.99:0,36,312	0/0:17,0:17:41.97:0,42,361	0/0:20,0:20:53.96:0,54,463	0/0:21,0:21:56.97:0,57,491	0/0:28,0:28:80.97:0,81,699	1/1:2,14:16:39.11:431,39,0	0/0:23,0:23:47.93:0,48,410	0/0:13,0:13:38.99:0,39,339	0/0:19,0:19:53.96:0,54,463	0/1:7,1:8:9.17:9,0,158	0/0:12,0:12:26.98:0,27,234	0/0:9,0:10:26.03:0,26,214	0/0:9,0:9:26.99:0,27,234	0/0:31,0:31:86.97:0,87,753	0/0:29,0:29:74.92:0,75,638	0/0:7,0:7:21:0,21,182
chr10	73136731	.	AG	A	3479.43	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=10.618;DP=398;FS=2.608;HRun=5;HaplotypeScore=50.8565;InbreedingCoeff=0.9683;MQ=80.50;MQ0=8;MQRankSum=-0.939;QD=26.56;ReadPosRankSum=3.715;VQSLOD=3.1376;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:48.08:524,48,0	0/0:6,0:6:18.06:0,18,241	0/0:23,0:15:16.56:0,17,177	0/0:19,0:13:20.91:0,21,169	0/0:14,0:14:42.04:0,42,518	0/0:10,0:10:27.09:0,27,356	0/0:14,0:14:30.03:0,30,379	0/0:29,0:29:78:0,78,918	0/0:6,0:6:15.05:0,15,201	1/1:1,11:12:33.09:361,33,0	1/1:1,16:17:45.04:465,45,0	1/1:1,11:12:26.76:305,27,0	1/1:2,4:6:12.03:135,12,0	0/0:9,0:9:27.08:0,27,346	0/0:18,0:18:54.12:0,54,661	0/0:12,0:12:30.09:0,30,386	0/0:21,0:21:57.16:0,57,741	1/1:0,9:9:24.06:261,24,0	0/0:13,0:12:33.10:0,33,426	0/0:15,0:15:36.12:0,36,482	0/0:4,0:4:6.01:0,6,65	1/1:1,11:12:27.08:304,27,0	1/1:1,21:22:54.15:610,54,0	1/1:1,4:4:12.03:136,12,0	1/1:1,13:14:36.04:379,36,0	0/0:24,0:24:66.16:0,66,843	0/0:15,0:15:45.13:0,45,582	0/0:15,0:14:42.14:0,42,562
chr10	73137884	.	T	TAC	45.49	PASS	AB=0.845;AC=6;AF=0.130;AN=46;BaseQRankSum=-0.290;DP=424;FS=1.723;HRun=0;HaplotypeScore=74.3014;InbreedingCoeff=0.0834;MQ=67.80;MQ0=15;MQRankSum=0.683;QD=0.80;ReadPosRankSum=-0.414;VQSLOD=1.3425;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:2.84:0,3,14	1/1:4,1:5:3.01:44,3,0	./.	./.	0/0:19,0:17:8.89:0,9,76	0/1:11,7:19:36.88:76,0,37	0/1:19,0:19:15.65:16,0,26	0/0:17,0:17:2.90:0,3,16	0/0:11,0:11:0.39:0,0,24	0/0:19,0:18:7.74:0,8,76	0/0:13,0:13:5.95:0,6,43	./.	0/0:13,0:13:2.84:0,3,14	0/0:9,0:9:3.01:0,3,32	0/0:13,0:13:9.02:0,9,95	0/0:14,0:13:12.02:0,12,128	0/0:22,0:23:26.34:0,26,269	1/1:10,0:9:2.74:12,3,0	0/0:12,0:11:3.01:0,3,32	0/0:9,0:9:3:0,3,28	0/0:27,0:26:4.25:0,4,35	./.	0/0:11,0:11:7.68:0,8,34	./.	0/0:12,0:10:14.82:0,15,125	0/0:13,0:13:1.51:0,2,29	0/0:13,0:11:2.98:0,3,22	0/0:13,0:13:8.09:0,8,150
chr10	73137911	.	ACACACACACACACACACACACT	A	1509.63	PASS	AB=0.992;AC=15;AF=0.268;AN=56;BaseQRankSum=4.035;DP=494;FS=8.591;HRun=0;HaplotypeScore=215.5324;InbreedingCoeff=0.4072;MQ=50.13;MQ0=28;MQRankSum=0.380;QD=10.00;ReadPosRankSum=-5.076;VQSLOD=0.0647;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,1:23:47.97:437,0,48	0/0:8,0:8:19.84:0,20,1281	0/0:17,0:5:5.53:0,6,128	0/0:22,0:10:17.99:0,18,238	0/0:22,0:20:37.61:0,38,1778	0/0:20,0:18:21.06:0,21,1439	0/0:27,0:26:61.06:0,61,2869	0/0:18,0:17:42.12:0,42,1064	0/0:12,0:12:26.45:0,26,1979	0/1:22,0:21:20.27:20,0,1506	0/1:15,0:15:23.02:23,0,954	1/1:11,0:11:20.05:254,20,0	1/1:0,10:10:2.09:180,2,0	0/0:13,0:12:26.98:0,27,1364	0/0:15,0:15:30.09:0,30,1869	0/0:21,0:20:48.59:0,49,3459	0/0:27,0:27:66.63:0,67,3924	0/1:19,0:16:40.24:40,0,1018	0/0:22,0:19:52.20:0,52,2081	0/0:10,0:9:21.06:0,21,1126	0/0:37,0:32:54.61:0,55,2822	1/1:6,0:6:3.01:47,3,0	1/1:3,11:13:8.26:527,8,0	1/1:12,0:12:6.02:133,6,0	0/1:19,0:17:13.74:14,0,1506	0/0:20,0:20:54.18:0,54,2806	0/0:17,0:15:21.48:0,21,739	0/0:15,0:14:42.10:0,42,2764
chr10	73137929	.	ACACTCACT	A	1578.89	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=4.605;DP=494;FS=7.238;HRun=0;HaplotypeScore=119.5263;InbreedingCoeff=0.6670;MQ=52.94;MQ0=26;MQRankSum=-0.872;QD=12.05;ReadPosRankSum=1.609;VQSLOD=1.4407;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:3.61:47,4,0	0/0:9,0:9:21.07:0,21,585	0/0:25,0:15:44.93:0,45,822	0/0:30,0:20:53.93:0,54,805	0/0:21,0:19:29.93:0,30,648	0/0:21,0:19:27.09:0,27,619	0/0:20,0:19:45.15:0,45,1050	0/0:22,0:21:54.12:0,54,956	0/0:12,0:12:20.93:0,21,536	1/1:6,12:17:33.11:546,33,0	1/1:12,1:13:23.57:385,24,0	0/0:12,0:12:1.47:0,1,4	1/1:10,0:10:2.95:49,3,0	0/0:13,0:12:26.92:0,27,620	0/0:13,0:13:18.06:0,18,567	0/0:21,0:20:49.40:0,49,1383	0/0:27,0:27:47.90:0,48,1290	0/1:16,0:15:16.56:17,0,19	0/0:25,0:21:48.16:0,48,1019	0/0:12,0:11:24.08:0,24,500	0/0:37,0:33:54.18:0,54,1112	0/0:7,0:7:0.89:0,1,2	1/1:12,0:11:9.45:123,9,0	0/0:8,0:8:0.40:0,0,1	1/1:18,3:20:30.10:531,30,0	0/1:24,0:24:52.40:52,0,681	0/0:13,0:11:18.53:0,19,348	0/0:13,0:12:24.08:0,24,879
chr10	73138064	.	A	AC	45.94	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.234;DP=417;FS=8.520;HRun=2;HaplotypeScore=44.8792;InbreedingCoeff=0.8086;MQ=64.60;MQ0=12;MQRankSum=-1.465;QD=6.56;ReadPosRankSum=-0.198;VQSLOD=-0.0251;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.14:0,57,688	0/0:3,0:3:9.03:0,9,111	0/0:13,0:11:26.92:0,27,284	0/0:13,0:8:14.20:0,14,184	0/0:19,0:19:54.16:0,54,657	0/0:28,0:28:75.19:0,75,911	0/0:14,0:12:36.11:0,36,435	0/0:21,0:20:57.04:0,57,638	0/0:6,0:5:11.93:0,12,112	0/0:17,0:17:36.09:0,36,431	0/0:12,0:12:27.02:0,27,299	0/0:16,0:15:36.11:0,36,445	0/0:12,0:12:33.10:0,33,408	0/0:7,0:7:21.07:0,21,260	0/0:11,0:11:30.08:0,30,359	0/0:14,0:14:39.12:0,39,482	0/0:22,0:19:56.39:0,56,675	1/1:2,5:5:9.03:129,9,0	0/0:29,0:26:60.19:0,60,741	0/0:18,0:17:48.15:0,48,594	0/0:20,0:18:39.12:0,39,479	0/0:11,0:11:27.08:0,27,334	0/0:10,0:10:24.07:0,24,296	0/0:12,0:11:32.93:0,33,367	0/0:16,0:15:36:0,36,414	0/0:24,0:24:60.17:0,60,730	0/0:16,0:16:42.12:0,42,505	0/0:4,0:4:11.90:0,12,127
chr10	73138141	.	GA	G	652.34	PASS	AB=0.771;AC=16;AF=0.286;AN=56;BaseQRankSum=7.317;DP=392;FS=7.111;HRun=9;HaplotypeScore=68.0428;InbreedingCoeff=0.7306;MQ=50.95;MQ0=27;MQRankSum=-8.796;QD=6.80;ReadPosRankSum=2.016;VQSLOD=0.9846;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,5:8:6:55,6,0	0/0:8,0:7:21.06:0,21,238	0/0:22,0:3:5.40:0,5,25	0/0:21,0:5:2.97:0,3,21	0/0:22,0:22:33.09:0,33,371	0/0:24,0:24:57.06:0,57,636	0/0:10,0:8:18.05:0,18,207	0/0:21,0:19:42.04:0,42,455	0/0:8,0:7:18.04:0,18,197	1/1:2,0:12:20.37:60,20,0	1/1:2,0:8:10.18:30,10,0	1/1:3,11:13:21.01:192,21,0	0/1:6,6:11:16.58:119,0,17	0/0:7,0:6:11.90:0,12,119	0/0:15,0:15:21.02:0,21,227	0/0:17,1:18:17.12:0,17,377	0/0:25,0:22:50.15:0,50,539	0/1:6,0:5:0.94:1,0,30	0/0:23,1:21:20.74:0,21,462	0/0:21,0:19:45.13:0,45,519	0/0:13,0:12:15:0,15,150	1/1:1,8:9:21.01:191,21,0	1/1:3,10:13:18:164,18,0	0/0:7,0:4:3.01:0,3,35	1/1:2,0:9:8.33:25,8,0	0/0:14,0:14:18.01:0,18,187	0/0:8,0:8:18.05:0,18,205	0/0:8,0:7:14.81:0,15,138
chr10	73138173	.	CAA	C	1300.53	PASS	AB=0.843;AC=13;AF=0.232;AN=56;BaseQRankSum=6.550;DP=508;FS=5.862;HRun=7;HaplotypeScore=82.1671;InbreedingCoeff=0.0397;MQ=47.89;MQ0=40;MQRankSum=-6.974;QD=5.99;ReadPosRankSum=1.153;VQSLOD=-0.6997;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:12,1:13:10.88:155,0,11	0/0:9,0:9:27.09:0,27,452	0/1:43,0:5:3.91:4,0,16	0/1:41,1:6:5.30:13,0,5	0/0:27,0:27:57.98:0,58,803	0/0:23,0:23:49.97:0,50,934	0/0:10,0:9:24.03:0,24,336	0/0:35,0:27:62.14:0,62,1029	0/0:11,0:11:30.06:0,30,434	0/1:11,15:22:54.15:382,0,54	0/1:5,8:12:2.91:250,0,3	0/1:9,1:10:8.01:83,0,8	0/1:10,3:11:69.96:70,0,99	0/0:10,0:10:21.04:0,21,271	0/0:11,0:11:24.07:0,24,324	0/0:20,0:19:38.43:0,38,551	0/0:27,0:24:35.45:0,35,612	0/1:8,0:8:28.60:77,0,29	0/0:33,0:29:67.09:0,67,869	0/0:23,0:23:63.09:0,63,887	0/0:9,0:7:18.06:0,18,273	1/1:7,2:9:16.89:137,17,0	0/1:11,3:14:36.53:44,0,37	0/1:8,0:6:18.11:22,0,18	0/1:6,10:14:11.69:220,0,12	0/0:17,0:15:23.83:0,24,478	0/0:13,0:13:32.72:0,33,409	0/0:13,0:12:27.13:0,27,290
chr10	73139702	.	TA	T	1298.83	PASS	AB=0.943;AC=24;AF=0.429;AN=56;BaseQRankSum=10.811;DP=407;FS=2.636;HRun=12;HaplotypeScore=49.9813;InbreedingCoeff=0.7172;MQ=66.16;MQ0=1;MQRankSum=-0.549;QD=7.14;ReadPosRankSum=3.404;VQSLOD=1.8884;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:29.84:232,30,0	0/0:9,1:10:6.81:0,7,244	0/0:10,0:7:7.35:0,7,86	0/1:9,0:8:2.98:6,0,3	0/1:23,2:25:0.92:1,0,480	0/0:12,0:13:26.89:0,27,258	0/0:13,0:13:26.99:0,27,256	0/0:34,1:35:9.72:0,10,525	0/0:11,0:11:30.06:0,30,305	1/1:3,0:12:16.76:49,17,0	1/1:1,0:14:18.32:53,18,0	1/1:3,15:18:38.85:302,39,0	1/1:1,14:15:38.84:302,39,0	0/1:7,0:7:2.50:3,0,134	0/0:19,2:22:30.70:0,31,477	0/0:13,1:14:9.84:0,10,281	0/0:17,1:18:18.81:0,19,358	1/1:2,10:12:26.90:209,27,0	0/1:18,4:22:32.96:33,0,411	0/0:17,1:17:9.84:0,10,282	0/0:5,0:5:12.02:0,12,122	1/1:2,1:4:5.02:29,5,0	1/1:1,5:6:14.94:116,15,0	1/1:1,5:8:16.02:105,16,0	1/1:1,0:14:22.41:65,22,0	0/0:20,0:19:54.11:0,54,548	0/0:19,2:21:30.78:0,31,474	0/0:13,1:14:11.33:0,11,243
chr10	73140157	.	T	TTAAAA	9938.65	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-6.327;DP=704;FS=4.506;HRun=0;HaplotypeScore=132.1341;InbreedingCoeff=0.9900;MQ=67.00;MQ0=6;MQRankSum=-5.666;QD=72.54;ReadPosRankSum=-0.310;VQSLOD=5.9025;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,38:47:99:3383,114,0	0/0:8,0:8:24.08:0,24,504	0/0:30,0:28:78.14:0,78,1469	0/0:31,0:26:65.71:0,66,1186	0/0:30,0:29:74.54:0,75,1532	0/0:20,0:20:57.20:0,57,1197	0/0:19,0:19:14.89:0,15,1031	0/0:34,0:31:84.27:0,84,1667	0/0:20,0:20:60.21:0,60,1253	0/0:20,0:20:48.16:0,48,1007	0/0:19,0:19:48.63:0,49,980	1/1:3,10:14:33.11:1007,33,0	1/1:2,10:13:36.12:1095,36,0	0/0:21,0:21:60.18:0,60,1184	0/0:29,0:29:87.28:0,87,1788	0/0:31,0:31:87.28:0,87,1753	0/0:32,0:32:93.28:0,93,1839	0/0:24,0:24:63.17:0,63,1276	0/0:33,0:31:90.28:0,90,1774	0/0:18,0:18:44.93:0,45,816	0/0:46,0:45:99:0,123,2541	1/1:4,17:21:57.20:1549,57,0	1/1:0,13:13:39.13:1065,39,0	1/1:5,22:27:63.22:1839,63,0	0/0:25,0:24:66.21:0,66,1330	0/0:36,0:36:99:0,102,2061	0/0:36,0:36:99:0,99,2078	0/0:5,0:5:12.04:0,12,252
chr10	73140320	.	T	TATAA	467.98	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.556;DP=736;FS=1.431;HRun=0;HaplotypeScore=115.7873;InbreedingCoeff=0.9401;MQ=81.20;MQ0=0;MQRankSum=-1.879;QD=58.50;ReadPosRankSum=0.157;VQSLOD=4.9637;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:75.24:0,75,1350	0/0:9,0:9:27.07:0,27,470	0/0:24,0:24:66.21:0,66,1190	0/0:14,0:14:39.05:0,39,609	0/0:30,0:30:87.28:0,87,1584	0/0:34,0:34:93.32:0,93,1729	0/0:13,0:13:33.11:0,33,616	0/0:51,0:51:99:0,144,2653	0/0:26,0:26:66.23:0,66,1215	0/0:23,0:23:63.21:0,63,1150	0/0:34,0:34:90.31:0,90,1656	0/0:29,0:29:81.26:0,81,1460	0/0:30,0:30:84.29:0,84,1567	0/0:30,0:30:84.29:0,84,1561	0/0:34,0:34:93.32:0,93,1736	0/0:38,0:38:99:0,114,2086	0/0:30,0:30:87.30:0,87,1617	1/1:0,7:8:21.07:560,21,0	0/0:28,0:28:81.25:0,81,1415	0/0:30,0:30:78.27:0,78,1447	0/0:21,0:21:54.17:0,54,966	0/0:20,0:20:54.17:0,54,953	0/0:24,0:24:63.22:0,63,1162	0/0:19,0:19:45.15:0,45,829	0/0:31,0:31:84.25:0,84,1498	0/0:32,0:32:90.31:0,90,1680	0/0:39,0:39:99:0,111,2029	0/0:5,0:5:9.03:0,9,168
chr10	73140530	.	AAAAAAC	A	990.24	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=5.069;DP=495;FS=5.107;HRun=0;HaplotypeScore=110.2272;InbreedingCoeff=0.7861;MQ=61.33;MQ0=7;MQRankSum=-4.202;QD=12.86;ReadPosRankSum=-0.025;VQSLOD=2.4700;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:21:30:0,30,581	0/0:6,0:6:18.05:0,18,456	0/1:19,0:9:1.66:2,0,129	0/0:24,0:15:8.91:0,9,90	0/0:15,0:15:29.44:0,29,664	0/0:19,0:19:27.30:0,27,1185	0/0:18,0:18:42.11:0,42,1170	0/0:32,0:32:60.16:0,60,1245	0/0:12,0:12:27.06:0,27,646	1/1:4,15:19:42.09:700,42,0	1/1:3,7:10:17.93:194,18,0	0/0:6,0:19:27.54:0,28,607	0/0:5,0:15:30.08:0,30,674	0/0:19,0:19:36.12:0,36,954	0/0:25,0:25:57.19:0,57,1719	0/0:23,0:23:42.08:0,42,1000	0/0:30,0:30:72.24:0,72,2073	1/1:3,0:9:3.01:42,3,0	0/0:26,0:23:47.66:0,48,974	0/0:10,0:10:18.04:0,18,478	0/0:7,0:7:15.05:0,15,465	0/0:4,0:6:11.86:0,12,137	0/0:6,0:8:15.05:0,15,397	0/0:11,0:23:21.04:0,21,447	1/1:4,16:20:14.96:201,15,0	0/0:28,0:28:57.18:0,57,1714	0/0:28,0:27:54.13:0,54,1321	0/0:4,0:3:3.01:0,3,95
chr10	73140736	.	TA	T	787.99	PASS	AB=0.929;AC=13;AF=0.232;AN=56;BaseQRankSum=5.831;DP=321;FS=2.077;HRun=10;HaplotypeScore=35.5786;InbreedingCoeff=0.7638;MQ=60.68;MQ0=1;MQRankSum=1.474;QD=12.12;ReadPosRankSum=2.062;VQSLOD=2.4032;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:21:53.99:469,54,0	0/0:4,0:4:9.02:0,9,99	0/0:8,0:1:3:0,3,29	0/0:11,0:8:15:0,15,144	0/0:24,0:24:60.16:0,60,663	0/0:14,0:14:39.11:0,39,431	0/0:4,0:4:11.49:0,11,98	0/0:29,1:31:55.05:0,55,794	0/0:5,0:5:15.04:0,15,166	0/0:9,0:9:19.87:0,20,102	0/0:11,0:11:17.51:0,18,103	1/1:2,9:11:21:182,21,0	1/1:3,3:6:8.99:78,9,0	0/0:7,0:7:18.05:0,18,198	0/0:8,0:8:18.05:0,18,199	0/0:10,0:10:1.66:0,2,210	0/0:20,0:20:44.77:0,45,464	0/1:12,1:13:5:24,0,5	0/0:21,1:22:34.10:0,34,597	0/0:10,0:10:24.06:0,24,265	0/0:3,0:3:9.02:0,9,99	1/1:3,3:6:8.99:78,9,0	1/1:1,3:4:9:78,9,0	1/1:2,2:4:6:52,6,0	0/0:10,0:10:22.14:0,22,141	0/0:18,0:18:45.06:0,45,494	0/0:13,0:12:36.57:0,37,399	0/0:13,0:14:24.72:0,25,385
chr10	73140741	.	A	AT	91.32	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.063;DP=311;FS=0.000;HRun=0;HaplotypeScore=39.1412;InbreedingCoeff=0.6525;MQ=62.61;MQ0=1;MQRankSum=-3.185;QD=9.13;ReadPosRankSum=2.496;VQSLOD=3.1894;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:56.20:0,56,373	0/0:3,0:3:9.03:0,9,126	0/0:8,0:1:2.37:0,2,8	0/0:12,0:9:15.02:0,15,162	0/0:22,0:22:63.20:0,63,862	0/0:13,0:13:39.13:0,39,544	0/0:4,0:4:11.39:0,11,119	0/0:33,0:33:93.16:0,93,1152	0/0:5,0:5:15.05:0,15,209	0/0:9,0:9:26.65:0,27,310	0/0:9,0:9:23.79:0,24,260	0/0:9,0:9:20.69:0,21,136	0/0:6,0:6:14.84:0,15,105	0/0:8,0:8:24.06:0,24,302	0/0:8,0:8:21.06:0,21,278	0/0:9,0:9:27.06:0,27,343	0/0:18,0:18:50.13:0,50,639	1/1:2,8:10:11.42:176,11,0	0/0:20,0:20:60.14:0,60,800	0/0:9,0:9:27.08:0,27,361	0/0:5,0:5:12.03:0,12,151	0/0:4,0:4:11.87:0,12,86	0/0:5,0:5:11.87:0,12,85	0/0:6,0:6:8.89:0,9,60	0/0:10,0:10:29.75:0,30,363	0/0:18,0:18:50.89:0,51,665	0/0:14,0:13:39.12:0,39,527	0/0:14,0:14:35.13:0,35,502
chr10	73140743	.	A	AAT	258.40	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=4.819;DP=310;FS=2.181;HRun=0;HaplotypeScore=44.5925;InbreedingCoeff=0.2758;MQ=62.61;MQ0=1;MQRankSum=-1.524;QD=6.98;ReadPosRankSum=0.145;VQSLOD=2.6313;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.84:0,55,379	0/0:3,0:3:9.03:0,9,129	0/0:8,0:1:3.01:0,3,33	0/0:12,0:9:16.77:0,17,195	0/0:21,0:21:63.20:0,63,885	0/0:13,0:13:39.13:0,39,563	0/0:4,0:4:0.36:0,0,101	0/0:35,0:35:96.18:0,96,1200	0/0:5,0:5:15.05:0,15,214	0/1:9,0:9:4.61:5,0,49	0/1:7,0:7:8.48:8,0,43	0/0:10,0:10:22.66:0,23,153	0/0:5,0:5:13.38:0,13,86	0/0:7,0:7:21.06:0,21,283	0/0:7,0:7:21.06:0,21,286	0/0:8,0:8:24.07:0,24,330	0/0:19,0:19:40.79:0,41,625	1/1:2,8:11:28.33:348,28,0	0/0:20,0:20:60.17:0,60,824	0/0:12,0:12:27.08:0,27,367	0/0:5,0:5:15.03:0,15,181	0/0:3,0:3:7.73:0,8,39	0/0:5,0:5:13.73:0,14,92	0/0:6,0:6:14.32:0,14,103	0/1:10,0:10:5.96:6,0,65	0/0:18,0:18:50.65:0,51,675	0/0:14,0:13:38.89:0,39,543	0/0:14,0:14:41.58:0,42,524
chr10	73142355	.	T	TAA	6669.42	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-9.573;DP=581;FS=4.673;HRun=0;HaplotypeScore=74.1116;InbreedingCoeff=0.9966;MQ=89.53;MQ0=1;MQRankSum=-2.860;QD=55.12;ReadPosRankSum=2.193;VQSLOD=5.2836;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:31:81.28:1644,81,0	0/0:12,0:12:36.12:0,36,587	0/0:23,0:23:63.21:0,63,1011	0/0:22,0:22:56.31:0,56,875	0/0:18,0:18:51.17:0,51,828	0/0:18,0:18:48.16:0,48,783	0/0:21,0:21:62.99:0,63,967	0/0:35,0:35:96.32:0,96,1543	0/0:19,0:19:57.18:0,57,905	0/0:31,0:31:93.30:0,93,1485	0/0:12,0:12:36.12:0,36,584	1/1:0,23:23:63.22:1280,63,0	1/1:0,18:18:54.19:1097,54,0	0/0:18,0:18:51.16:0,51,807	0/0:35,0:35:99:0,105,1713	0/0:24,0:24:72.25:0,72,1174	0/0:21,0:21:57.19:0,57,930	0/0:6,0:6:14.98:0,15,213	0/0:18,0:18:48.15:0,48,760	0/0:26,0:26:78.24:0,78,1224	0/0:28,0:28:84.29:0,84,1369	1/1:1,12:14:39.09:751,39,0	1/1:0,19:19:51.18:1035,51,0	1/1:2,14:15:44.64:862,45,0	0/0:12,0:12:36.12:0,36,585	0/0:24,0:24:72.25:0,72,1164	0/0:23,0:23:69.24:0,69,1125	0/0:14,0:14:42.14:0,42,678
chr10	73142700	.	GA	G	348.10	PASS	AB=0.823;AC=9;AF=0.161;AN=56;BaseQRankSum=5.858;DP=552;FS=1.844;HRun=14;HaplotypeScore=65.9632;InbreedingCoeff=0.3196;MQ=53.36;MQ0=11;MQRankSum=1.235;QD=2.74;ReadPosRankSum=2.907;VQSLOD=-0.6508;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:32:63.22:0,63,670	0/0:9,0:9:11.99:0,12,105	0/0:6,0:4:7.03:0,7,36	0/0:6,0:2:2.80:0,3,13	0/0:25,2:26:8.60:0,9,344	0/1:16,2:19:9.81:10,0,185	0/0:24,2:25:6.70:0,7,315	0/0:22,1:22:7.62:0,8,199	0/0:10,0:11:26.82:0,27,224	1/1:9,7:15:17.78:123,18,0	0/1:9,6:15:3.29:71,0,3	0/0:23,2:25:25.19:0,25,348	0/1:13,3:16:8.16:8,0,204	0/0:14,0:14:26.98:0,27,234	0/0:29,2:31:44.64:0,45,575	0/0:15,3:19:0.78:0,1,273	0/0:27,0:25:57.01:0,57,513	0/0:11,0:10:14.99:0,15,133	0/1:13,2:14:4.79:5,0,136	0/0:23,0:24:36.81:0,37,422	0/0:23,0:23:19.23:0,19,243	0/0:20,1:19:36.44:0,36,318	0/0:21,1:25:17.55:0,18,322	0/1:16,4:20:36.24:36,0,228	1/1:8,15:25:36.75:238,37,0	0/0:18,1:19:14.60:0,15,302	0/0:27,0:28:56.78:0,57,487	0/0:15,0:14:32.97:0,33,288
chr10	73148147	.	A	ATGGC	697.35	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.425;DP=632;FS=0.000;HRun=0;HaplotypeScore=102.3327;InbreedingCoeff=0.9913;MQ=86.69;MQ0=0;MQRankSum=-3.149;QD=58.11;ReadPosRankSum=2.357;VQSLOD=4.8913;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.23:0,66,1214	0/0:8,0:8:18.06:0,18,331	0/0:23,0:23:66.23:0,66,1192	0/0:19,0:19:45.15:0,45,793	0/0:33,0:33:90.28:0,90,1595	0/0:37,0:37:99:0,102,1832	0/0:21,0:21:60.19:0,60,1073	0/0:36,0:36:99:0,99,1764	0/0:31,0:31:81.25:0,81,1429	0/0:21,0:21:57.18:0,57,992	0/0:19,0:19:54.15:0,54,914	0/0:39,0:39:99:0,111,2036	0/0:21,0:21:54.19:0,54,994	0/0:24,0:24:66.23:0,66,1202	0/0:31,0:31:81.28:0,81,1491	0/0:24,0:24:66.21:0,66,1183	0/0:24,0:24:66.10:0,66,1210	1/1:1,10:12:30.10:792,30,0	0/0:18,0:18:45.15:0,45,821	0/0:19,0:19:54.17:0,54,942	0/0:17,0:17:48.15:0,48,833	0/0:19,0:19:54.17:0,54,955	0/0:21,0:21:51.10:0,51,840	0/0:13,0:13:36.12:0,36,654	0/0:20,0:20:60.19:0,60,1074	0/0:19,0:19:45.15:0,45,828	0/0:24,0:24:66.20:0,66,1153	0/0:15,0:15:36.10:0,36,629
chr10	73148790	.	TAAA	T	337.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.195;DP=728;FS=2.827;HRun=6;HaplotypeScore=98.0044;InbreedingCoeff=0.9947;MQ=70.61;MQ0=0;MQRankSum=-4.040;QD=33.72;ReadPosRankSum=1.275;VQSLOD=1.9541;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,2127	0/0:14,0:14:42.14:0,42,909	0/0:13,0:13:33.11:0,33,698	0/0:9,0:9:21.07:0,21,435	0/0:19,0:19:51.18:0,51,1157	0/0:21,0:21:60.19:0,60,1276	0/0:24,0:24:66.23:0,66,1496	0/0:41,0:40:99:0,111,2472	0/0:26,0:26:72.24:0,72,1591	0/0:35,0:35:96.32:0,96,2070	0/0:25,0:25:75.26:0,75,1677	0/0:39,0:39:99:0,117,2448	0/0:31,0:31:90.31:0,90,2024	0/0:23,0:23:66.23:0,66,1445	0/0:34,0:34:99:0,99,2200	0/0:34,0:34:99:0,99,2184	0/0:19,0:19:57.18:0,57,1230	1/1:0,10:10:27.09:431,27,0	0/0:28,0:28:81.27:0,81,1774	0/0:30,0:30:84.28:0,84,1847	0/0:29,0:29:78.27:0,78,1767	0/0:29,0:29:87.29:0,87,1906	0/0:31,0:31:90.30:0,90,1996	0/0:28,0:28:81.27:0,81,1794	0/0:22,0:22:66.19:0,66,1320	0/0:29,0:29:84.27:0,84,1820	0/0:34,0:34:84.28:0,84,1831	0/0:17,0:17:51.18:0,51,1156
chr10	73148897	.	GA	G	1167.52	PASS	AB=0.849;AC=18;AF=0.321;AN=56;BaseQRankSum=6.284;DP=696;FS=0.000;HRun=15;HaplotypeScore=91.7585;InbreedingCoeff=0.1436;MQ=68.36;MQ0=2;MQRankSum=0.856;QD=3.52;ReadPosRankSum=4.618;VQSLOD=0.4812;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,11:30:8.50:175,8,0	0/0:5,0:5:10.81:0,11,81	0/1:23,2:17:33.53:34,0,81	0/1:11,0:8:4.59:5,0,60	0/0:27,2:31:31.91:0,32,494	0/0:19,1:22:0.34:0,0,247	0/1:15,4:19:38.11:38,0,188	0/0:26,2:29:27.78:0,28,370	0/1:26,3:30:6.90:7,0,272	0/0:24,1:25:21.50:0,21,293	0/0:21,1:24:12.27:0,12,312	1/1:16,20:37:37.02:250,37,0	1/1:8,19:28:52.06:331,52,0	0/0:15,1:20:4.53:0,5,138	0/0:36,1:42:60.08:0,60,608	0/0:36,0:39:69.92:0,70,629	0/1:20,3:23:8.28:8,0,275	0/0:12,0:15:30.05:0,30,229	0/1:17,4:21:34.67:35,0,194	0/0:39,0:41:82.98:0,83,651	0/0:17,0:18:4.64:0,5,138	1/1:2,8:12:15.70:88,16,0	0/1:14,8:25:33.57:135,0,34	0/1:10,17:31:27.95:215,0,28	0/1:15,2:18:6.48:6,0,207	0/0:21,2:26:16.65:0,17,333	0/0:21,1:25:22.91:0,23,317	0/1:16,1:22:13.68:14,0,218
chr10	73148974	.	C	CTAAATGAATA	11844.96	PASS	AB=0.964;AC=7;AF=0.125;AN=56;BaseQRankSum=-9.265;DP=805;FS=1.369;HRun=0;HaplotypeScore=226.1842;InbreedingCoeff=0.8230;MQ=76.26;MQ0=0;MQRankSum=-12.527;QD=79.50;ReadPosRankSum=-0.757;VQSLOD=4.2974;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.19:0,54,1603	0/0:8,0:8:15.05:0,15,469	0/0:16,0:16:30.09:0,30,667	0/0:18,0:18:11.56:0,12,497	0/0:34,0:34:90.31:0,90,2814	0/0:28,0:28:75.26:0,75,2327	0/0:23,0:23:54.19:0,54,1561	0/0:39,0:39:81.28:0,81,2436	0/0:31,0:31:75.24:0,75,2255	1/1:17,24:42:93.31:4243,93,0	1/1:18,27:45:87.11:3779,87,0	0/0:28,0:28:66.21:0,66,1942	0/0:30,0:30:69.24:0,69,2136	0/0:21,0:21:54.17:0,54,1616	0/0:44,0:44:99:0,120,3488	0/0:43,0:43:99:0,117,3370	0/0:26,0:26:66.23:0,66,2021	0/0:18,0:18:36.12:0,36,1075	0/0:29,0:29:63.21:0,63,1801	0/0:44,0:44:99:0,114,3415	0/0:13,0:13:33.11:0,33,1030	0/0:33,0:33:93.31:0,93,2767	0/0:23,0:23:60.21:0,60,1812	0/0:30,0:30:68.85:0,69,2113	1/1:7,27:34:75.26:3738,75,0	0/1:26,1:27:84.27:84,0,1961	0/0:37,0:36:99:0,105,3246	0/0:19,0:19:45.15:0,45,1407
chr10	73149441	.	A	AC	5485.91	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=7.339;DP=484;FS=0.000;HRun=1;HaplotypeScore=64.9256;InbreedingCoeff=0.9880;MQ=66.64;MQ0=4;MQRankSum=-0.030;QD=37.57;ReadPosRankSum=2.587;VQSLOD=5.3846;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,11:15:39.05:592,39,0	0/0:8,0:8:24.08:0,24,336	0/0:35,0:15:25.20:0,25,300	0/0:20,0:11:15.92:0,16,182	0/0:28,0:28:78.25:0,78,1071	0/0:17,0:17:42.14:0,42,588	0/0:6,0:6:18.06:0,18,252	0/0:36,0:36:96.31:0,96,1328	0/0:17,0:17:51.13:0,51,691	1/1:11,15:26:72.20:1079,72,0	1/1:5,11:15:29.84:479,30,0	1/1:9,9:19:54.11:748,54,0	1/1:8,9:17:48.15:743,48,0	0/0:19,0:19:51.15:0,51,695	0/0:23,0:23:69.23:0,69,965	0/0:16,0:16:48.12:0,48,621	0/0:14,0:14:39.10:0,39,525	1/1:1,6:8:21.06:314,21,0	0/0:14,0:14:42.01:0,42,560	0/0:15,0:14:39.13:0,39,546	0/0:13,0:13:39.11:0,39,527	1/1:2,5:7:15.03:216,15,0	1/1:2,9:10:21.07:335,21,0	1/1:6,4:10:12.04:188,12,0	1/1:8,9:17:51.16:793,51,0	0/0:16,0:16:45.15:0,45,627	0/0:23,0:22:66.21:0,66,902	0/0:15,0:15:45.15:0,45,629
chr10	73150017	.	CCAGG	C	5594.85	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=8.564;DP=392;FS=0.448;HRun=0;HaplotypeScore=76.2782;InbreedingCoeff=0.9579;MQ=44.79;MQ0=5;MQRankSum=-9.349;QD=44.40;ReadPosRankSum=-0.710;VQSLOD=4.5506;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,12:15:33.11:595,33,0	0/0:9,0:8:24.08:0,24,629	0/0:13,0:2:6.02:0,6,146	0/0:11,0:4:5.51:0,6,50	0/0:17,0:17:30.10:0,30,799	0/0:11,0:10:27.09:0,27,715	0/0:17,1:16:48.16:0,48,1212	0/0:16,0:15:39.13:0,39,1003	0/0:14,0:14:42.14:0,42,1119	1/1:2,14:16:42.14:779,42,0	1/1:2,9:11:27.09:493,27,0	1/1:0,17:17:44.97:833,45,0	1/1:3,13:14:36.12:671,36,0	0/0:12,0:12:36.12:0,36,953	0/0:19,0:19:48.16:0,48,1278	0/0:19,0:19:57.20:0,57,1517	0/0:15,0:15:42.14:0,42,1108	1/1:0,10:10:27.09:504,27,0	0/0:7,0:7:21.07:0,21,559	0/0:4,0:4:12.04:0,12,320	0/0:14,0:14:42.14:0,42,1111	1/1:0,7:7:18.06:327,18,0	1/1:2,10:12:27.09:504,27,0	1/1:1,7:8:15.05:277,15,0	1/1:0,13:13:33.11:612,33,0	0/0:25,0:25:72.25:0,72,1894	0/0:21,0:21:60.21:0,60,1596	0/0:19,0:18:54.19:0,54,1419
chr10	73150506	.	C	CT	4512.98	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-9.148;DP=555;FS=0.407;HRun=3;HaplotypeScore=51.4309;InbreedingCoeff=0.9944;MQ=74.69;MQ0=0;MQRankSum=0.375;QD=35.26;ReadPosRankSum=2.635;VQSLOD=5.2815;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:75.21:1028,75,0	0/0:6,0:6:15.05:0,15,180	0/0:14,0:14:20.07:0,20,370	0/0:11,0:11:27.08:0,27,318	0/0:30,0:30:87.27:0,87,1044	0/0:24,0:24:69.21:0,69,828	0/0:14,0:14:33.06:0,33,396	0/0:43,0:43:99:0,111,1293	0/0:23,0:23:66.19:0,66,780	0/0:30,0:30:78.20:0,78,913	0/0:26,0:26:63.18:0,63,744	1/1:0,13:13:39.13:546,39,0	1/1:1,23:24:60.20:840,60,0	0/0:13,0:13:36.11:0,36,432	0/0:10,0:10:27.08:0,27,324	0/0:16,0:16:48.15:0,48,576	0/0:19,0:19:45.14:0,45,539	0/0:7,0:7:21.06:0,21,251	0/0:20,0:20:60.16:0,60,701	0/0:26,0:26:78.24:0,78,936	0/0:15,0:15:45.12:0,45,528	1/1:5,19:24:54.18:755,54,0	1/1:0,15:15:39.13:546,39,0	1/1:3,21:24:57.19:798,57,0	0/0:23,0:22:69.21:0,69,828	0/0:16,0:16:48.12:0,48,554	0/0:15,0:15:42.12:0,42,492	0/0:26,0:25:69.17:0,69,810
chr10	73150915	.	G	GCTCTCT	18195.02	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-10.575;DP=637;FS=0.000;HRun=0;HaplotypeScore=134.0906;InbreedingCoeff=0.9957;MQ=73.58;MQ0=0;MQRankSum=-18.192;QD=80.87;ReadPosRankSum=2.935;VQSLOD=5.6623;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,15:21:51.17:1902,51,0	0/0:5,0:5:15.05:0,15,360	0/0:23,0:23:62.88:0,63,1336	0/0:19,0:19:47.01:0,47,1136	0/0:32,0:32:96.30:0,96,2342	0/0:24,0:24:72.23:0,72,1793	0/0:19,0:19:57.20:0,57,1435	0/0:27,0:27:78.26:0,78,1918	0/0:23,0:23:66.23:0,66,1651	1/1:3,22:27:81.19:2810,81,0	1/1:5,22:31:54.18:2019,54,0	1/1:5,20:28:69.24:2519,69,0	1/1:3,13:18:48.12:1650,48,0	0/0:18,0:18:54.19:0,54,1348	0/0:34,0:34:99:0,102,2505	0/0:34,0:34:99:0,102,2605	0/0:19,0:19:57.17:0,57,1350	1/1:3,11:17:37.01:1353,37,0	0/0:21,0:21:63.22:0,63,1555	0/0:27,0:27:81.28:0,81,2076	0/0:19,0:19:54.19:0,54,1377	1/1:3,19:24:54.19:2008,54,0	1/1:1,19:23:48.16:1797,48,0	1/1:0,12:14:17.82:674,18,0	1/1:5,14:21:39.13:1462,39,0	0/0:32,0:32:96.33:0,96,2459	0/0:29,0:28:87.30:0,87,2210	0/0:7,0:7:21.07:0,21,538
chr10	73154839	.	CTGTCTG	C	1567.15	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=11.528;DP=660;FS=1.156;HRun=0;HaplotypeScore=132.0226;InbreedingCoeff=0.8513;MQ=63.01;MQ0=21;MQRankSum=-4.379;QD=9.06;ReadPosRankSum=2.998;VQSLOD=2.3445;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:11.99:111,12,0	0/0:9,0:9:27.07:0,27,739	0/0:37,0:11:18.29:0,18,301	0/0:54,0:20:11.81:0,12,300	0/0:25,0:24:63.10:0,63,1425	0/0:26,0:26:75.24:0,75,2288	0/0:21,0:21:60.20:0,60,1344	0/0:29,0:25:75.25:0,75,1404	0/0:19,0:19:54.18:0,54,1406	1/1:1,9:9:27.09:493,27,0	1/1:2,11:11:6.02:144,6,0	1/1:28,0:28:13.58:325,14,0	1/1:15,0:15:15.91:136,16,0	0/0:17,0:17:48.16:0,48,1312	0/0:33,0:33:99:0,99,2535	0/0:28,0:28:78.22:0,78,2027	0/0:34,0:34:87.27:0,87,2449	0/0:20,0:20:29.34:0,29,392	0/0:13,0:10:21.07:0,21,427	0/0:28,0:27:73.12:0,73,1992	0/0:25,0:25:69.23:0,69,1593	0/1:18,0:17:8.49:111,0,8	1/1:21,0:21:18.35:191,18,0	1/1:22,0:22:3.48:32,3,0	1/1:0,10:10:9.03:219,9,0	0/0:26,0:26:64.33:0,64,1859	0/0:26,0:26:75.20:0,75,1856	0/0:14,0:14:42.13:0,42,905
chr10	73154841	.	GTCTGTCTC	G	2721.46	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=10.778;DP=657;FS=1.164;HRun=0;HaplotypeScore=145.7554;InbreedingCoeff=0.7569;MQ=62.23;MQ0=20;MQRankSum=-5.944;QD=14.17;ReadPosRankSum=3.575;VQSLOD=2.4255;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:12.04:310,12,0	0/0:9,0:9:24.07:0,24,760	0/0:37,0:10:8.25:0,8,157	0/0:52,0:19:29.19:0,29,195	0/0:25,0:24:57.08:0,57,1467	0/0:26,0:26:72.13:0,72,2494	0/0:22,0:22:60.06:0,60,1262	0/0:31,0:27:80.84:0,81,1148	0/0:19,0:19:57.08:0,57,1493	0/1:10,0:9:24.86:112,0,25	1/1:13,0:11:5.42:27,5,0	1/1:0,27:28:36.12:958,36,0	1/1:0,15:15:17.58:407,18,0	0/0:17,0:17:48.09:0,48,1361	0/0:32,0:32:93.19:0,93,2661	0/0:27,0:27:72.09:0,72,2087	0/0:33,0:33:83.90:0,84,2595	0/1:19,0:19:38.95:39,0,292	0/0:13,0:11:30.01:0,30,499	0/0:27,0:26:70.07:0,70,2039	0/0:26,0:26:75.05:0,75,1453	1/1:1,18:18:18.06:408,18,0	1/1:1,18:20:20.45:540,20,0	1/1:2,20:22:3.48:83,3,0	1/1:10,0:10:7.67:33,8,0	0/0:26,0:26:72.15:0,72,1946	0/0:25,0:25:72.56:0,73,1919	0/0:16,0:16:39.01:0,39,748
chr10	73154845	.	G	GTC	65.79	PASS	AB=0.922;AC=4;AF=0.071;AN=56;BaseQRankSum=3.383;DP=655;FS=0.000;HRun=0;HaplotypeScore=103.8120;InbreedingCoeff=0.3083;MQ=64.42;MQ0=15;MQRankSum=2.262;QD=0.72;ReadPosRankSum=-2.681;VQSLOD=1.2247;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:6.88:0,7,38	0/0:8,0:8:21.06:0,21,249	0/0:39,0:14:8.86:0,9,167	0/1:54,0:20:7.27:7,0,15	0/0:23,0:22:45.05:0,45,514	0/0:25,0:25:63.18:0,63,737	0/0:24,0:24:45.10:0,45,503	0/0:34,0:30:47.64:0,48,489	0/0:19,0:19:36.11:0,36,426	1/1:11,0:10:6.52:111,7,0	0/0:14,0:12:4.26:0,4,11	0/0:28,0:28:30.22:0,30,146	0/0:15,0:15:11.05:0,11,56	0/0:18,0:18:30.08:0,30,346	0/0:31,0:32:81.05:0,81,916	0/0:25,0:25:51.14:0,51,585	0/0:31,0:31:66.16:0,66,749	0/0:19,0:19:24.18:0,24,281	0/0:12,0:11:24:0,24,266	0/0:27,0:26:54.58:0,55,629	0/0:26,0:26:45.13:0,45,523	0/0:18,0:17:11.20:0,11,54	0/0:19,0:20:16.80:0,17,82	0/0:22,0:22:2.60:0,3,10	0/0:10,0:10:4:0,4,11	0/1:21,4:25:47.20:47,0,491	0/0:22,0:23:50.92:0,51,537	0/0:15,0:15:12.04:0,12,142
chr10	73154990	.	GGT	G	297.33	PASS	AB=1.000;AC=15;AF=0.288;AN=52;BaseQRankSum=4.589;DP=294;FS=9.366;HRun=0;HaplotypeScore=46.2363;InbreedingCoeff=0.5917;MQ=73.25;MQ0=4;MQRankSum=-0.890;QD=4.80;ReadPosRankSum=0.353;VQSLOD=0.9061;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,1:9:15.92:124,16,0	0/0:2,0:2:2.71:0,3,22	0/0:18,0:10:20.93:0,21,228	0/0:18,0:12:17.17:0,17,227	0/0:11,0:11:22.76:0,23,193	0/0:7,0:7:11.81:0,12,81	0/0:14,0:14:28.16:0,28,259	0/0:10,0:10:17.92:0,18,173	0/0:16,0:16:0.40:0,0,210	0/1:4,0:4:11.72:17,0,12	1/1:0,6:6:5.68:58,6,0	1/1:1,13:14:0.12:1,0,0	1/1:6,0:6:9.44:58,9,0	0/0:14,0:13:28.60:0,29,374	0/0:19,0:19:38.41:0,38,501	0/0:26,0:26:63.85:0,64,615	0/0:22,0:22:16.49:0,16,506	1/1:6,0:6:10.36:74,10,0	0/0:6,0:5:9:0,9,79	0/0:7,0:7:11.96:0,12,118	0/0:12,0:12:10.34:0,10,226	./.	0/1:5,0:5:0:0,0,0	1/1:5,0:4:11.75:91,12,0	./.	0/0:10,0:10:15.33:0,15,112	0/0:17,0:17:32.18:0,32,262	0/1:7,0:7:31.80:32,0,138
chr10	73156957	.	CGA	C	11133.55	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=16.021;DP=708;FS=10.533;HRun=0;HaplotypeScore=89.1699;InbreedingCoeff=0.9993;MQ=76.10;MQ0=4;MQRankSum=-1.746;QD=44.18;ReadPosRankSum=3.629;VQSLOD=5.9054;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:84.29:1371,84,0	0/0:9,0:9:27.08:0,27,501	0/0:15,0:15:38.48:0,38,690	0/0:12,0:13:27.34:0,27,503	0/0:17,0:17:51.17:0,51,1005	0/0:21,0:21:60.21:0,60,1201	0/0:26,0:26:78.27:0,78,1572	0/0:33,0:33:99:0,99,1951	0/0:32,0:32:96.33:0,96,1921	1/1:0,27:26:78.25:1248,78,0	1/1:0,14:14:30.10:489,30,0	1/1:0,43:41:99:1909,117,0	1/1:0,33:33:93.32:1517,93,0	0/0:26,0:26:78.27:0,78,1582	0/0:31,0:31:93.32:0,93,1889	0/0:39,0:39:99:0,117,2377	0/0:40,0:40:99:0,120,2437	1/1:0,22:22:57.19:930,57,0	0/0:17,0:17:51.18:0,51,1036	0/0:29,0:29:81.23:0,81,1577	0/0:41,0:41:99:0,120,2417	1/1:0,18:18:45.15:734,45,0	1/1:0,20:20:57.19:928,57,0	1/1:0,30:29:81.28:1322,81,0	1/1:0,14:14:42.14:685,42,0	0/0:27,1:28:35.32:0,35,1596	0/0:31,0:31:93.32:0,93,1865	0/0:8,0:8:24.08:0,24,487
chr10	73159208	.	GGAGGAAGAA	G	974.59	PASS	AB=0.634;AC=1;AF=0.018;AN=56;BaseQRankSum=6.124;DP=949;FS=0.000;HRun=0;HaplotypeScore=245.2727;InbreedingCoeff=-0.0184;MQ=65.29;MQ0=11;MQRankSum=-5.475;QD=37.48;ReadPosRankSum=0.398;VQSLOD=2.7699;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.23:0,75,3073	0/0:11,0:11:21.06:0,21,862	0/0:69,0:41:72.50:0,72,2283	0/0:77,0:36:63.84:0,64,1548	0/0:29,0:29:78.27:0,78,3475	0/0:20,0:19:54.13:0,54,2178	0/0:14,0:14:39.13:0,39,1552	0/0:46,0:46:99:0,123,4601	0/0:19,0:19:48.16:0,48,2017	0/0:31,0:30:84.29:0,84,3900	0/0:20,0:20:54.15:0,54,2192	0/0:51,0:51:99:0,135,5801	0/0:33,0:33:87.28:0,87,3844	0/0:27,0:27:68.74:0,69,2983	0/0:34,0:34:96.33:0,96,4120	0/0:35,0:35:93.30:0,93,3977	0/0:31,0:31:83.59:0,84,3760	0/0:36,0:36:99:0,102,4436	0/0:16,0:16:36.11:0,36,1237	0/0:27,0:27:78.24:0,78,3114	0/0:30,0:30:84.27:0,84,3435	0/0:48,0:48:99:0,123,4791	0/0:43,0:43:99:0,114,5051	0/0:72,0:72:99:0,196,8016	0/1:11,15:26:99:1049,0,1208	0/0:40,0:40:99:0,117,5197	0/0:20,0:20:48.14:0,48,2020	0/0:16,0:16:30.09:0,30,1129
chr10	73160068	.	T	TC	15953.63	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-17.690;DP=925;FS=1.386;HRun=0;HaplotypeScore=84.3469;InbreedingCoeff=0.9956;MQ=63.84;MQ0=1;MQRankSum=1.183;QD=35.37;ReadPosRankSum=6.504;VQSLOD=4.2221;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,46:46:99:1456,102,0	0/0:16,0:16:48.10:0,48,602	0/0:25,0:18:53.90:0,54,644	0/0:16,0:11:29.79:0,30,294	0/0:23,0:23:66.19:0,66,873	0/0:24,0:24:72.21:0,72,957	0/0:25,0:25:75.25:0,75,1043	0/0:34,0:34:96.26:0,96,1212	0/0:28,0:28:84.26:0,84,1141	1/1:2,42:44:99:1749,126,0	1/1:1,15:16:42.05:574,42,0	1/1:2,60:62:99:2183,152,0	1/1:1,64:65:99:2315,163,0	0/0:34,0:34:99:0,99,1337	0/0:31,0:31:93.29:0,93,1268	0/0:31,0:31:90.29:0,90,1228	0/0:26,0:26:72.23:0,72,989	1/1:1,21:22:12.28:686,12,0	0/0:23,0:23:63.15:0,63,798	0/0:20,0:20:60.19:0,60,816	0/0:28,0:28:84.18:0,84,1100	1/1:0,51:51:99:1833,132,0	1/1:0,46:46:99:1686,120,0	1/1:1,74:76:99:2528,178,0	1/1:0,23:23:66.22:944,66,0	0/0:34,1:35:53.37:0,53,1177	0/0:30,0:30:90.21:0,90,1191	0/0:25,0:25:66.10:0,66,905
chr10	73161166	.	T	TCTCCAGACTGTTA	48849.04	PASS	AB=0.905;AC=21;AF=0.375;AN=56;BaseQRankSum=-11.712;DP=857;FS=2.349;HRun=0;HaplotypeScore=251.4200;InbreedingCoeff=0.9217;MQ=74.24;MQ0=0;MQRankSum=-21.312;QD=113.60;ReadPosRankSum=2.870;VQSLOD=5.0156;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,15:40:63.08:3761,63,0	0/0:8,0:8:21.07:0,21,783	0/0:24,0:24:63.17:0,63,2121	0/0:20,0:20:47.91:0,48,1378	0/0:31,0:31:87.16:0,87,3183	0/0:27,0:27:75.24:0,75,2904	0/0:32,0:32:93.31:0,93,3430	0/0:24,0:24:66.21:0,66,2113	0/0:33,0:33:96.33:0,96,3861	1/1:10,19:42:99:5820,111,0	1/1:4,6:14:24.01:1210,24,0	1/1:13,31:66:99:8776,141,0	1/1:7,24:47:84.29:5284,84,0	0/0:30,0:30:84.29:0,84,3275	0/0:20,0:20:60.18:0,60,2090	0/0:22,0:22:66.23:0,66,2643	0/0:36,0:36:99:0,102,3282	1/1:5,9:22:33.11:2140,33,0	0/0:30,0:30:81.12:0,81,2698	0/0:29,0:29:84.27:0,84,3041	0/0:34,0:34:96.33:0,96,3753	1/1:14,35:62:99:8302,129,0	1/1:9,23:43:90.01:5191,90,0	1/1:9,16:41:59.42:3815,59,0	1/1:9,17:34:69.17:4210,69,0	0/1:17,2:19:99:340,0,1956	0/0:21,0:21:60.17:0,60,2013	0/0:6,0:6:18.06:0,18,726
chr10	73163446	.	TA	T	856.95	PASS	AB=0.545;AC=5;AF=0.089;AN=56;BaseQRankSum=5.770;DP=477;FS=0.000;HRun=10;HaplotypeScore=53.3663;InbreedingCoeff=0.7279;MQ=65.84;MQ0=7;MQRankSum=1.461;QD=18.63;ReadPosRankSum=0.435;VQSLOD=4.0410;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:72.19:0,72,796	0/0:9,0:9:27.07:0,27,299	0/0:20,0:12:26.63:0,27,277	0/0:20,0:10:1.09:0,1,113	0/0:20,0:20:46.26:0,46,467	0/0:16,0:16:48.11:0,48,521	0/0:4,0:4:12.03:0,12,133	0/0:42,0:37:61.51:0,62,881	0/0:9,0:9:23.28:0,23,254	1/1:1,15:16:44.99:391,45,0	0/1:2,10:12:3.17:204,0,3	0/0:22,1:23:28.07:0,28,526	0/0:21,0:21:57.13:0,57,614	0/0:8,0:8:15.04:0,15,166	0/0:12,0:12:27.02:0,27,270	0/0:19,0:19:51.05:0,51,538	0/0:27,0:27:75.16:0,75,803	0/0:22,0:22:48.11:0,48,521	0/0:24,0:23:66.16:0,66,715	0/0:10,0:9:21.04:0,21,224	0/0:8,0:8:24.05:0,24,256	0/0:3,0:3:6:0,6,58	0/0:10,0:10:12.03:0,12,133	0/0:12,0:12:30.04:0,30,318	1/1:1,17:18:44.99:391,45,0	0/0:23,0:23:69.04:0,69,722	0/0:23,0:22:63.16:0,63,689	0/0:17,0:17:42.11:0,42,464
chr10	73165756	.	A	AC	8970.97	PASS	AB=0.939;AC=21;AF=0.375;AN=56;BaseQRankSum=-0.176;DP=670;FS=0.959;HRun=1;HaplotypeScore=80.8335;InbreedingCoeff=0.9515;MQ=72.59;MQ0=1;MQRankSum=-2.465;QD=26.08;ReadPosRankSum=4.399;VQSLOD=4.8231;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,39:40:93.22:1218,93,0	0/0:4,0:4:12.02:0,12,129	0/0:19,0:18:26.70:0,27,296	0/0:9,0:8:20.83:0,21,201	0/0:27,0:27:81.20:0,81,974	0/0:16,0:16:47.99:0,48,575	0/0:14,0:14:39.02:0,39,439	0/0:33,0:33:90.24:0,90,1071	0/0:13,0:13:36.12:0,36,464	1/1:3,23:26:73.52:870,74,0	1/1:0,18:19:50.87:574,51,0	1/1:3,37:41:78.08:1040,78,0	1/1:1,27:28:60.20:800,60,0	0/0:18,0:18:51.15:0,51,645	0/0:27,0:28:83.58:0,84,996	0/0:22,0:22:66.08:0,66,778	0/0:24,0:24:69.05:0,69,807	1/1:0,0:24:44.73:350,45,0	0/0:22,0:22:60.02:0,60,671	0/0:26,0:26:69.17:0,69,823	0/0:11,0:11:33.05:0,33,368	1/1:4,38:42:99:1315,114,0	1/1:4,33:37:80.97:1035,81,0	1/1:2,32:34:87.27:1145,87,0	1/1:1,21:22:36.72:623,37,0	0/1:29,1:31:1.07:1,0,942	0/0:26,0:26:64.59:0,65,775	0/0:14,0:14:42.14:0,42,541
chr10	73166028	.	T	TG	713.70	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.144;DP=576;FS=0.000;HRun=1;HaplotypeScore=67.4950;InbreedingCoeff=0.9926;MQ=71.97;MQ0=0;MQRankSum=-2.620;QD=35.69;ReadPosRankSum=1.319;VQSLOD=3.7040;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.26:0,93,1176	0/0:8,0:8:24.08:0,24,311	0/0:20,0:18:54.11:0,54,645	0/0:19,0:18:49.03:0,49,600	0/0:16,0:16:45.15:0,45,584	0/0:23,0:23:66.21:0,66,857	0/0:21,0:21:57.13:0,57,740	0/0:27,0:27:75.21:0,75,946	0/0:18,0:18:54.18:0,54,700	0/0:13,0:13:39.13:0,39,507	0/0:15,0:15:42.14:0,42,545	0/0:25,0:25:75.24:0,75,973	0/0:30,0:30:90.28:0,90,1154	0/0:18,0:18:54.18:0,54,701	0/0:20,0:20:60.20:0,60,779	0/0:11,0:11:33.11:0,33,429	0/0:31,0:31:93.29:0,93,1192	1/1:0,20:20:54.18:809,54,0	0/0:11,0:11:27.09:0,27,351	0/0:20,0:20:57.19:0,57,740	0/0:35,0:35:99:0,99,1285	0/0:16,0:16:48.13:0,48,593	0/0:34,0:34:99:0,102,1309	0/0:30,0:30:90.29:0,90,1168	0/0:16,0:16:45.15:0,45,584	0/0:18,0:18:54.13:0,54,682	0/0:23,0:23:66.20:0,66,843	0/0:7,0:7:21.07:0,21,273
chr10	73166525	.	TTA	T	5950.33	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.911;DP=519;FS=5.495;HRun=0;HaplotypeScore=87.4374;InbreedingCoeff=0.9807;MQ=51.19;MQ0=3;MQRankSum=-14.390;QD=35.42;ReadPosRankSum=-1.637;VQSLOD=6.1529;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:7:12.04:195,12,0	0/0:6,0:6:18.06:0,18,366	0/0:15,0:8:21.07:0,21,394	0/0:19,0:12:32.78:0,33,671	0/0:20,0:20:51.16:0,51,986	0/0:25,0:25:63.22:0,63,1249	0/0:24,0:23:69.23:0,69,1367	0/0:41,0:39:99:0,114,2119	0/0:14,0:14:30.09:0,30,574	1/1:0,23:23:66.23:1074,66,0	1/1:1,20:21:33.11:536,33,0	1/1:0,19:19:51.17:829,51,0	1/1:0,18:18:42.14:683,42,0	0/0:11,0:11:33.04:0,33,626	0/0:20,0:20:48.16:0,48,975	0/0:12,0:12:36.12:0,36,720	0/0:28,1:28:17.48:0,17,1231	1/1:0,10:10:24.08:391,24,0	0/0:22,0:21:63.18:0,63,1154	0/0:21,0:21:63.22:0,63,1279	0/0:23,0:23:60.21:0,60,1189	1/1:0,20:20:42.14:682,42,0	1/1:0,19:19:42.14:682,42,0	1/1:0,7:7:9.03:146,9,0	1/1:0,23:22:45.15:732,45,0	0/0:15,0:15:45.15:0,45,914	0/0:29,0:29:81.14:0,81,1611	0/0:5,0:5:15.05:0,15,305
chr10	73167928	.	GC	G	2084.14	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.543;DP=768;FS=0.988;HRun=4;HaplotypeScore=82.4481;InbreedingCoeff=0.9191;MQ=82.12;MQ0=0;MQRankSum=-2.050;QD=31.58;ReadPosRankSum=1.257;VQSLOD=4.1521;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,1866	0/0:6,0:6:15.05:0,15,209	0/0:28,0:27:75.01:0,75,977	0/0:22,0:22:42.50:0,42,669	0/0:17,0:17:45.15:0,45,629	0/0:14,0:14:42.14:0,42,582	0/0:33,0:33:96.32:0,96,1343	0/0:27,0:27:75.25:0,75,1035	0/0:24,0:24:72.24:0,72,1007	1/1:0,24:24:72.22:863,72,0	1/1:0,20:20:54.17:646,54,0	0/0:30,0:30:84.26:0,84,1143	0/0:47,0:47:99:0,138,1877	0/0:22,0:22:66.21:0,66,905	0/0:26,0:26:72.21:0,72,980	0/0:24,0:24:69.22:0,69,950	0/0:35,0:35:99:0,105,1433	0/0:27,0:27:72.20:0,72,985	0/0:20,0:20:60.18:0,60,808	0/0:17,0:17:48.14:0,48,636	0/0:42,0:42:99:0,120,1641	0/0:39,0:39:99:0,117,1634	0/0:43,0:43:99:0,126,1693	0/0:50,0:50:99:0,144,1981	1/1:0,22:22:60.18:718,60,0	0/0:24,2:26:3.26:0,3,879	0/0:31,0:31:87.23:0,87,1155	0/0:5,0:5:9.03:0,9,126
chr10	73168263	.	AGATTTTTT	A	785.80	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=1.199;DP=757;FS=6.511;HRun=0;HaplotypeScore=208.3211;InbreedingCoeff=0.2321;MQ=74.77;MQ0=1;MQRankSum=-1.026;QD=4.88;ReadPosRankSum=-5.854;VQSLOD=0.3187;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:2.53:0,3,1993	0/0:13,0:13:39.13:0,39,1605	0/0:38,0:33:83.76:0,84,2340	0/0:27,0:24:25.44:0,25,1420	0/0:17,0:17:46.97:0,47,1907	0/0:26,0:26:76.11:0,76,3007	0/0:27,0:27:80.83:0,81,2497	0/0:37,0:37:99:0,110,3507	0/0:19,0:19:53.81:0,54,1848	0/1:13,0:13:17.88:18,0,756	0/0:13,0:13:37.68:0,38,1235	0/1:50,0:50:20.97:21,0,3746	0/1:37,0:37:11.56:12,0,2820	0/0:29,0:29:84:0,84,3246	0/0:31,0:31:90.31:0,90,3744	0/0:27,0:27:78.21:0,78,3138	0/0:44,0:44:99:0,129,4625	1/1:2,15:17:27.09:734,27,0	0/0:17,0:17:44.98:0,45,1413	0/0:18,0:18:54.15:0,54,2014	0/0:21,0:21:60.16:0,60,2241	0/0:31,0:31:27.47:0,27,2401	0/0:34,0:34:57.08:0,57,2670	0/1:44,0:44:99:130,0,2729	0/0:25,0:25:45.15:0,45,2154	0/0:26,0:26:78.19:0,78,2482	0/0:39,0:39:99:0,111,3876	0/0:9,0:9:27.09:0,27,1084
chr10	73169234	.	AC	A	2487.89	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.566;DP=915;FS=26.494;HRun=2;HaplotypeScore=142.6188;InbreedingCoeff=0.9977;MQ=86.56;MQ0=0;MQRankSum=-4.038;QD=31.90;ReadPosRankSum=2.953;VQSLOD=1.5336;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,51:52:99:1714,132,0	0/0:10,0:10:30.10:0,30,449	0/0:32,0:32:67.62:0,68,1315	0/0:31,0:31:77.70:0,78,1069	0/0:28,0:28:84.28:0,84,1253	0/0:31,0:31:93.29:0,93,1352	0/0:36,0:36:99:0,108,1594	0/0:40,0:40:99:0,117,1697	0/0:26,0:27:81.20:0,81,1147	0/0:31,0:31:86.31:0,86,1192	0/0:18,0:18:54.15:0,54,744	0/0:58,0:58:99:0,175,2462	0/0:54,0:54:99:0,159,2244	0/0:29,0:29:87.23:0,87,1255	0/0:31,0:31:93.31:0,93,1390	0/0:27,0:27:81.27:0,81,1214	0/0:30,0:30:90.30:0,90,1341	1/1:0,26:26:69.22:896,69,0	0/0:26,0:26:69.23:0,69,1012	0/0:19,0:19:57.17:0,57,812	0/0:38,0:38:99:0,114,1687	0/0:46,0:46:99:0,138,1925	0/0:35,0:35:99:0,102,1430	0/0:66,0:66:99:0,193,2755	0/0:29,0:29:87.29:0,87,1255	0/0:21,0:21:60.19:0,60,874	0/0:37,0:37:99:0,111,1617	0/0:7,0:7:21.07:0,21,314
chr10	73169438	.	AG	A	2517.81	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.934;DP=903;FS=1.559;HRun=1;HaplotypeScore=87.4190;InbreedingCoeff=0.9961;MQ=80.04;MQ0=0;MQRankSum=-1.687;QD=38.15;ReadPosRankSum=1.949;VQSLOD=4.2402;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:60:99:0,184,2874	0/0:9,0:9:27.09:0,27,427	0/0:18,0:18:51.17:0,51,799	0/0:26,0:26:68.89:0,69,1006	0/0:32,0:32:96.33:0,96,1525	0/0:22,0:22:66.23:0,66,1055	0/0:27,0:27:81.26:0,81,1271	0/0:33,0:33:99:0,99,1505	0/0:27,0:27:81.26:0,81,1269	1/1:0,30:30:90.28:1239,90,0	1/1:0,16:16:45.15:629,45,0	0/0:72,0:72:99:0,217,3405	0/0:57,0:57:99:0,169,2661	0/0:35,0:35:99:0,105,1670	0/0:33,0:33:99:0,99,1583	0/0:24,0:24:72.25:0,72,1147	0/0:33,0:33:99:0,99,1550	0/0:23,0:23:69.21:0,69,1076	0/0:18,0:18:54.18:0,54,863	0/0:26,0:26:78.22:0,78,1174	0/0:42,0:42:99:0,126,2005	0/0:44,0:44:99:0,132,2091	0/0:44,0:44:99:0,132,2032	0/0:73,0:73:99:0,219,3426	1/1:1,19:20:57.19:792,57,0	0/0:21,1:22:24.27:0,24,965	0/0:30,0:29:90.31:0,90,1434	0/0:6,0:6:18.06:0,18,288
chr10	73170817	.	AGCAAGC	A	5545.01	PASS	AB=0.619;AC=5;AF=0.096;AN=52;BaseQRankSum=9.788;DP=360;FS=22.153;HRun=0;HaplotypeScore=89.8733;InbreedingCoeff=-0.1312;MQ=46.45;MQ0=12;MQRankSum=-11.458;QD=41.38;ReadPosRankSum=2.626;VQSLOD=3.0442;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:45.15:0,45,1499	0/0:8,0:8:15.05:0,15,525	./.	./.	0/0:4,0:4:9.03:0,9,315	0/0:10,0:9:15.05:0,15,525	0/0:12,0:11:24.08:0,24,688	0/0:10,0:9:6.02:0,6,210	0/0:12,0:12:36.11:0,36,1129	0/0:11,0:11:21.07:0,21,693	0/0:7,0:6:12.04:0,12,421	0/1:7,19:26:99:1247,0,205	0/1:7,13:20:99:844,0,467	0/0:9,0:9:24.07:0,24,753	0/0:7,0:7:15.05:0,15,526	0/0:13,0:13:36.12:0,36,1191	0/0:24,0:23:63.22:0,63,2147	0/0:11,0:11:30.07:0,30,966	0/0:24,0:21:48.16:0,48,1597	0/0:5,0:5:6.02:0,6,183	0/0:7,0:7:14.70:0,15,462	0/1:9,26:35:99:1697,0,552	0/1:5,22:27:99:1513,0,135	0/1:19,7:26:99:243,0,908	0/0:3,0:2:6.02:0,6,205	0/0:12,0:10:24.08:0,24,834	0/0:9,0:9:24.08:0,24,772	0/0:4,0:3:9.03:0,9,296
chr10	73170868	.	GA	G	5018.35	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.343;DP=611;FS=1.915;HRun=9;HaplotypeScore=73.7626;InbreedingCoeff=0.9752;MQ=63.42;MQ0=8;MQRankSum=-1.414;QD=19.84;ReadPosRankSum=4.625;VQSLOD=5.3546;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:30:63.03:576,63,0	0/0:10,0:10:27.08:0,27,312	0/0:23,0:15:4.41:0,4,294	0/0:18,0:12:36.06:0,36,390	0/0:24,0:24:66.19:0,66,757	0/0:13,0:13:36.11:0,36,415	0/0:13,0:13:36.11:0,36,415	0/0:37,0:37:99:0,99,1115	0/0:19,0:19:57.15:0,57,648	1/1:0,15:14:42.02:384,42,0	1/1:3,20:22:54.03:494,54,0	1/1:4,27:31:59.99:549,60,0	1/1:3,22:25:56.91:499,57,0	0/0:14,1:15:14.66:0,15,421	0/0:18,0:17:51.15:0,51,589	0/0:12,0:12:27.08:0,27,312	0/0:32,1:33:62.79:0,63,966	0/0:18,0:18:45.13:0,45,519	0/0:22,0:22:57.14:0,57,637	0/0:17,0:17:48.10:0,48,539	0/0:11,0:11:30.09:0,30,346	1/1:8,28:35:75.03:686,75,0	1/1:7,32:39:80.57:741,81,0	1/1:4,27:31:77.67:705,78,0	1/1:1,21:21:41.94:384,42,0	0/0:24,0:24:69.19:0,69,787	0/0:15,0:15:39.12:0,39,450	0/0:16,0:14:33.09:0,33,371
chr10	73171119	.	C	CT	4346.86	PASS	AB=0.694;AC=5;AF=0.089;AN=56;BaseQRankSum=15.686;DP=990;FS=2.025;HRun=3;HaplotypeScore=104.5170;InbreedingCoeff=-0.0987;MQ=75.38;MQ0=0;MQRankSum=-2.171;QD=14.89;ReadPosRankSum=1.578;VQSLOD=4.3376;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,181,2127	0/0:14,0:14:39.09:0,39,453	0/0:13,0:13:33.08:0,33,366	0/0:25,0:25:67.10:0,67,701	0/0:25,0:25:72.21:0,72,852	0/0:18,0:18:50.73:0,51,574	0/0:35,0:35:99:0,102,1212	0/0:33,0:33:86.96:0,87,996	0/0:37,0:37:99:0,108,1284	0/0:28,0:28:78.23:0,78,926	0/0:18,0:18:54.17:0,54,648	0/1:43,27:70:99:897,0,1173	0/1:30,32:62:99:1211,0,725	0/0:37,0:37:99:0,111,1321	0/0:44,0:44:99:0,123,1449	0/0:49,0:49:99:0,144,1717	0/0:46,0:45:99:0,132,1572	0/0:32,0:32:90.25:0,90,1067	0/0:29,0:29:87.24:0,87,1022	0/0:22,0:22:63.19:0,63,756	0/0:47,0:47:99:0,132,1570	0/1:24,22:46:99:713,0,631	0/1:19,18:36:99:650,0,504	0/1:50,27:76:99:875,0,1371	0/0:26,0:25:72.22:0,72,863	0/0:28,0:28:81.25:0,81,972	0/0:26,0:26:78.24:0,78,936	0/0:5,0:5:15.05:0,15,180
chr10	73174578	.	C	CCCATCCAT	3152.36	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=10.314;DP=773;FS=8.617;HRun=0;HaplotypeScore=193.5489;InbreedingCoeff=0.8394;MQ=63.64;MQ0=7;MQRankSum=-9.314;QD=13.59;ReadPosRankSum=-3.267;VQSLOD=1.4525;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:16.66:601,17,0	0/0:14,0:14:30.10:0,30,695	0/0:35,0:26:11.91:0,12,160	0/0:36,0:25:14.07:0,14,257	0/0:22,0:22:27.08:0,27,617	0/0:25,0:25:42.13:0,42,985	0/0:28,0:28:42.14:0,42,987	0/0:41,0:40:20.10:0,20,333	0/0:33,0:33:54.14:0,54,1261	1/1:30,0:30:24.54:440,25,0	1/1:14,0:14:2.61:12,3,0	1/1:32,0:32:2.68:11,3,0	1/1:37,0:37:77.72:1690,78,0	0/0:42,0:42:66.21:0,66,1588	0/0:31,0:31:54.17:0,54,1270	0/0:28,0:28:66.20:0,66,1498	0/0:37,0:37:69.21:0,69,1656	1/1:12,7:20:12.02:393,12,0	0/0:30,0:30:24:0,24,546	0/0:24,0:24:48.16:0,48,1162	0/0:54,0:55:99:0,102,2435	1/1:14,0:14:5.65:35,6,0	1/1:18,0:18:3.01:42,3,0	1/1:13,0:13:3.01:62,3,0	1/1:17,0:17:8.66:58,9,0	0/0:24,0:24:13.25:0,13,1057	0/0:24,0:24:51.15:0,51,1197	0/0:11,0:11:11.97:0,12,239
chr10	73174583	.	C	CCATCCATCCATCCATT	7288.06	PASS	AB=0.899;AC=18;AF=0.321;AN=56;BaseQRankSum=6.767;DP=830;FS=11.386;HRun=0;HaplotypeScore=299.1579;InbreedingCoeff=0.5906;MQ=59.68;MQ0=9;MQRankSum=-6.816;QD=23.28;ReadPosRankSum=-2.862;VQSLOD=1.3251;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:36:7.34:848,0,7	0/0:13,0:13:33.10:0,33,1236	0/0:36,0:24:55.31:0,55,699	0/0:34,0:23:34.53:0,35,604	0/0:19,0:19:39.08:0,39,1159	0/0:29,0:29:69.14:0,69,1943	0/0:28,0:28:54.11:0,54,1795	0/0:45,0:44:83.28:0,83,1057	0/0:32,0:32:84.16:0,84,2395	1/1:9,22:43:79.44:2158,79,0	1/1:2,8:19:8.69:57,9,0	1/1:8,22:40:3.43:19,3,0	1/1:33,0:33:93.18:3370,93,0	0/0:39,0:39:93.21:0,93,3037	0/0:31,0:31:75.14:0,75,2418	0/0:27,0:27:75.23:0,75,2621	0/0:40,0:40:59.37:0,59,3067	0/1:21,0:20:99:245,0,124	0/0:27,0:27:46.60:0,47,1137	0/0:22,0:22:63.14:0,63,2128	0/0:59,0:59:99:0,153,4700	1/1:3,10:24:7.93:45,8,0	1/1:8,11:23:2.87:158,3,0	0/1:7,4:22:11.89:306,0,12	1/1:4,13:29:6.81:30,7,0	0/1:23,0:23:52.51:53,0,1915	0/0:25,0:25:69.15:0,69,2210	0/0:11,0:11:30.03:0,30,545
chr10	73174591	.	C	CCATCCATT	3134.22	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=7.727;DP=841;FS=7.639;HRun=0;HaplotypeScore=191.3448;InbreedingCoeff=0.0732;MQ=55.24;MQ0=12;MQRankSum=-6.796;QD=15.99;ReadPosRankSum=1.492;VQSLOD=2.2674;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,33:47:17.95:786,18,0	0/0:13,0:13:33.10:0,33,827	0/0:41,0:24:58.32:0,58,707	0/0:34,0:20:38.03:0,38,550	0/0:20,0:20:48.07:0,48,881	0/0:27,0:27:72.14:0,72,1374	0/0:24,0:24:60.11:0,60,1279	0/0:42,0:41:99:0,105,1180	0/0:36,0:36:99:0,99,1815	0/1:36,0:36:99:917,0,117	0/1:17,0:17:8.76:9,0,47	0/0:38,0:38:5.22:0,5,32	0/1:32,0:32:85.64:1197,0,86	0/0:37,0:37:99:0,102,2077	0/0:30,0:30:84.12:0,84,1682	0/0:29,0:29:87.22:0,87,1917	0/0:42,0:42:80.29:0,80,2171	0/1:23,0:23:99:279,0,169	0/0:23,0:23:49.86:0,50,849	0/0:29,0:29:81.13:0,81,1578	0/0:61,0:61:99:0,177,3318	0/0:26,0:26:3.96:0,4,51	0/1:18,0:18:19.90:57,0,20	0/1:23,0:23:27.01:27,0,84	0/0:27,0:27:0.85:0,1,40	0/0:22,0:22:8.34:0,8,1345	0/0:28,0:28:73.96:0,74,1523	0/0:16,0:16:45.01:0,45,565
chr10	73177855	.	C	CA	1229.85	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.656;DP=870;FS=0.689;HRun=1;HaplotypeScore=100.2276;InbreedingCoeff=0.9999;MQ=78.35;MQ0=0;MQRankSum=-0.818;QD=37.27;ReadPosRankSum=1.220;VQSLOD=3.8079;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,156,1954	0/0:14,0:14:42.14:0,42,545	0/0:23,0:23:60.19:0,60,763	0/0:17,0:17:45.06:0,45,553	0/0:28,0:28:84.25:0,84,1074	0/0:33,0:33:99:0,99,1284	0/0:23,0:23:69.22:0,69,884	0/0:53,0:53:99:0,159,1999	0/0:24,0:24:72.23:0,72,934	0/0:40,0:39:99:0,117,1518	0/0:27,0:27:81.25:0,81,1033	0/0:39,0:39:99:0,105,1349	0/0:40,0:40:99:0,117,1513	0/0:23,0:23:69.22:0,69,895	0/0:48,0:48:99:0,138,1791	0/0:35,0:34:99:0,99,1243	0/0:33,0:33:93.30:0,93,1207	1/1:1,32:33:90.27:1325,90,0	0/0:27,0:27:75.24:0,75,974	0/0:30,0:29:87.28:0,87,1128	0/0:34,0:34:99:0,99,1265	0/0:26,0:26:75.24:0,75,972	0/0:27,0:27:78.25:0,78,1000	0/0:29,0:29:87.27:0,87,1112	0/0:41,0:40:99:0,123,1581	0/0:30,0:30:90.27:0,90,1142	0/0:24,0:24:72.20:0,72,904	0/0:16,0:16:48.15:0,48,610
chr10	73179787	.	G	GAGC	3233.06	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-10.010;DP=722;FS=0.535;HRun=0;HaplotypeScore=106.1499;InbreedingCoeff=0.9956;MQ=83.45;MQ0=0;MQRankSum=-5.723;QD=46.19;ReadPosRankSum=3.516;VQSLOD=5.5408;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,37:43:96.31:2033,96,0	0/0:7,0:7:18.06:0,18,289	0/0:19,0:19:48.16:0,48,761	0/0:23,0:23:57.01:0,57,807	0/0:18,0:18:45.10:0,45,669	0/0:15,0:15:42.10:0,42,645	0/0:19,0:19:51.16:0,51,790	0/0:36,0:36:96.30:0,96,1454	0/0:19,0:19:51.16:0,51,793	0/0:26,0:25:72.24:0,72,1128	0/0:15,0:15:42.06:0,42,597	0/0:25,0:25:69.21:0,69,1060	0/0:32,0:32:96.27:0,96,1481	0/0:35,0:35:96.31:0,96,1490	0/0:40,0:40:99:0,114,1736	0/0:34,0:34:93.24:0,93,1354	0/0:35,0:35:96.30:0,96,1477	1/1:4,23:27:60.21:1324,60,0	0/0:19,0:19:51.15:0,51,791	0/0:13,0:13:36.10:0,36,531	0/0:55,0:55:99:0,156,2331	0/0:25,0:25:69.24:0,69,1102	0/0:21,0:21:54.17:0,54,841	0/0:36,0:36:93.29:0,93,1432	0/0:21,0:21:60.20:0,60,936	0/0:30,0:30:87.24:0,87,1345	0/0:23,0:23:57.18:0,57,887	0/0:11,0:11:33.04:0,33,452
chr10	73181587	.	CA	C	5739.33	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.278;DP=678;FS=4.721;HRun=7;HaplotypeScore=66.7118;InbreedingCoeff=0.9712;MQ=82.79;MQ0=0;MQRankSum=-1.229;QD=26.57;ReadPosRankSum=3.566;VQSLOD=5.6934;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,37:38:93.21:949,93,0	0/0:8,0:8:21.07:0,21,264	0/0:19,0:19:26.25:0,26,340	0/0:21,1:22:19.36:0,19,545	0/0:34,0:34:93.27:0,93,1141	0/0:27,0:27:75.23:0,75,930	0/0:30,0:30:84.27:0,84,1055	0/0:28,0:28:78.15:0,78,923	0/0:23,0:23:69.20:0,69,841	1/1:2,19:21:57.13:581,57,0	1/1:1,20:21:57.07:570,57,0	1/1:2,33:35:93.21:949,93,0	1/1:3,20:23:54.11:549,54,0	0/0:22,0:22:60.17:0,60,730	0/0:26,0:26:72.21:0,72,878	0/0:23,0:23:63.19:0,63,779	0/0:39,0:39:99:0,111,1372	0/0:24,0:24:60.13:0,60,701	0/0:23,0:23:63.18:0,63,758	0/0:26,0:26:69.21:0,69,856	0/0:29,0:29:72.21:0,72,881	1/1:0,24:24:69.15:703,69,0	1/1:0,13:13:32.97:337,33,0	1/1:0,17:17:48.11:490,48,0	1/1:3,21:24:60.13:612,60,0	0/0:31,0:31:78.25:0,78,976	0/0:27,0:27:75.24:0,75,943	0/0:1,0:1:3.01:0,3,38
chr10	73184485	.	GGT	G	15167.75	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=23.344;DP=1042;FS=0.759;HRun=0;HaplotypeScore=143.8395;InbreedingCoeff=0.9996;MQ=80.45;MQ0=2;MQRankSum=-1.460;QD=35.94;ReadPosRankSum=3.336;VQSLOD=6.7682;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,44:48:99:1723,123,0	0/0:12,0:12:33.11:0,33,586	0/0:23,0:23:63.21:0,63,1088	0/0:28,0:28:72.24:0,72,1232	0/0:35,0:35:99:0,99,1782	0/0:26,0:26:66.23:0,66,1182	0/0:40,0:40:99:0,117,2043	0/0:55,0:55:99:0,154,2723	0/0:39,0:39:99:0,108,1865	1/1:1,25:26:75.22:1014,75,0	1/1:1,26:26:60.20:840,60,0	1/1:2,74:76:99:2815,202,0	1/1:4,61:65:99:2437,175,0	0/0:32,0:32:90.31:0,90,1621	0/0:56,0:56:99:0,163,2874	0/0:37,0:37:99:0,108,1916	0/0:29,0:29:84.29:0,84,1503	0/0:24,0:24:69.22:0,69,1213	0/0:14,0:14:36.12:0,36,633	0/0:30,0:30:90.31:0,90,1616	0/0:51,0:51:99:0,138,2405	1/1:9,55:64:99:2184,157,0	1/1:2,44:45:99:1676,120,0	1/1:2,48:50:99:1723,123,0	1/1:2,18:20:54.18:756,54,0	0/0:35,2:37:24.31:0,24,1727	0/0:33,0:33:99:0,99,1708	0/0:19,0:19:57.19:0,57,978
chr10	73184841	.	TA	T	15807.51	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=18.845;DP=932;FS=0.000;HRun=1;HaplotypeScore=92.0663;InbreedingCoeff=0.9999;MQ=79.35;MQ0=2;MQRankSum=-3.451;QD=38.09;ReadPosRankSum=4.348;VQSLOD=5.1145;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:75.25:1049,75,0	0/0:20,0:20:60.20:0,60,959	0/0:26,0:26:69.17:0,69,1029	0/0:25,0:25:65.60:0,66,1071	0/0:35,0:35:99:0,105,1678	0/0:37,0:37:99:0,108,1678	0/0:23,0:23:69.22:0,69,1070	0/0:41,0:41:99:0,123,1935	0/0:28,0:28:81.26:0,81,1261	1/1:0,35:35:99:1421,102,0	1/1:0,33:33:87.29:1217,87,0	1/1:0,62:61:99:2346,169,0	1/1:0,60:60:99:2264,163,0	0/0:26,0:26:78.27:0,78,1247	0/0:27,0:27:81.28:0,81,1295	0/0:31,0:31:93.32:0,93,1487	0/0:14,0:14:42.12:0,42,645	0/0:26,0:26:72.23:0,72,1116	0/0:22,0:22:66.21:0,66,1002	0/0:29,0:29:84.29:0,84,1343	0/0:31,0:31:90.31:0,90,1429	1/1:0,69:69:99:2558,184,0	1/1:0,53:53:99:1972,141,0	1/1:0,37:36:99:1427,102,0	1/1:0,40:40:99:1553,111,0	0/0:32,0:32:96.33:0,96,1535	0/0:34,0:34:99:0,102,1574	0/0:10,0:10:30.09:0,30,455
chr10	73186607	.	TA	T	7018.99	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=18.216;DP=700;FS=2.571;HRun=7;HaplotypeScore=97.7014;InbreedingCoeff=0.9918;MQ=76.92;MQ0=0;MQRankSum=-1.347;QD=24.46;ReadPosRankSum=4.167;VQSLOD=4.9466;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:60.14:611,60,0	0/0:11,0:11:24.08:0,24,302	0/0:35,0:32:61.65:0,62,645	0/0:24,0:20:10.17:0,10,279	0/0:25,0:25:69.21:0,69,856	0/0:20,0:20:45.12:0,45,542	0/0:17,0:17:48.09:0,48,550	0/0:40,0:40:99:0,117,1436	0/0:15,0:15:42.13:0,42,528	1/1:3,29:32:90.16:900,90,0	1/1:6,15:21:45.10:459,45,0	1/1:4,34:38:87.20:887,87,0	1/1:1,43:44:99:1009,99,0	0/0:20,1:21:20.51:0,21,544	0/0:14,0:14:39.11:0,39,479	0/0:22,0:22:63.20:0,63,793	0/0:27,0:27:75.23:0,75,929	0/0:19,0:19:54.17:0,54,679	0/0:21,0:21:57.17:0,57,702	0/0:21,0:21:48.14:0,48,591	0/0:17,0:17:48.15:0,48,602	1/1:1,40:41:99:1010,99,0	1/1:3,38:41:96.19:979,96,0	1/1:4,25:29:66.15:673,66,0	1/1:1,17:18:48.11:490,48,0	0/0:20,0:20:54.17:0,54,669	0/0:29,0:29:78.25:0,78,979	0/0:15,0:15:39.11:0,39,476
chr10	73188120	.	C	CAGAGAGAGAGAGAG	5009.41	PASS	AB=0.930;AC=23;AF=0.411;AN=56;BaseQRankSum=3.892;DP=776;FS=1.884;HRun=0;HaplotypeScore=299.6814;InbreedingCoeff=0.5657;MQ=71.23;MQ0=11;MQRankSum=-5.686;QD=11.54;ReadPosRankSum=-3.572;VQSLOD=2.5180;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,6:26:9.03:433,9,0	0/0:9,0:9:18.02:0,18,521	0/0:40,0:20:9.50:0,9,132	0/1:65,0:36:82.20:82,0,181	0/0:20,0:21:18.06:0,18,584	0/0:24,0:23:39.13:0,39,1434	0/1:21,0:22:40.84:41,0,1186	0/0:32,0:33:29.38:0,29,1086	0/0:22,0:23:47.51:0,48,1664	1/1:20,2:28:24.08:1047,24,0	1/1:17,3:26:6.02:251,6,0	1/1:36,0:35:30.10:989,30,0	1/1:42,0:40:21.05:732,21,0	0/0:25,0:28:72.24:0,72,2580	0/0:30,0:34:63.21:0,63,2369	0/0:24,0:27:54.18:0,54,1814	0/0:21,0:24:40.47:0,40,1878	0/1:13,0:28:6.19:6,0,267	0/0:11,0:13:24.02:0,24,706	0/0:20,0:21:42.14:0,42,1507	0/0:22,0:24:47.90:0,48,1429	1/1:39,0:39:2.24:118,2,0	1/1:34,0:31:1.12:64,1,0	1/1:40,0:39:8.74:339,9,0	1/1:18,0:18:20.78:829,21,0	0/1:22,0:22:77.82:78,0,813	0/0:19,0:20:36.12:0,36,1287	0/1:8,0:8:0.33:0,0,114
chr10	73189416	.	GA	G	348	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.174;DP=723;FS=0.000;HRun=10;HaplotypeScore=78.7228;InbreedingCoeff=0.8563;MQ=80.31;MQ0=2;MQRankSum=-2.712;QD=13.38;ReadPosRankSum=0.598;VQSLOD=3.6567;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:50.98:443,51,0	0/0:10,1:11:6.97:0,7,291	0/0:46,1:33:7.71:0,8,401	0/0:29,0:17:26.18:0,26,231	0/0:26,0:26:57.14:0,57,622	0/0:25,0:24:69.19:0,69,763	0/0:26,0:26:72.13:0,72,774	0/0:30,0:30:66.18:0,66,727	0/0:18,0:18:43.66:0,44,460	0/0:23,0:23:63.16:0,63,690	0/0:19,1:20:25.07:0,25,498	0/0:32,0:32:90.24:0,90,995	0/0:49,0:49:99:0,129,1416	0/0:28,0:28:78.20:0,78,855	0/0:23,0:23:57.15:0,57,630	0/0:23,0:23:60.16:0,60,664	0/0:23,0:23:63.15:0,63,683	0/0:19,0:19:51.14:0,51,561	0/0:24,1:25:33.04:0,33,624	0/0:18,0:18:54.08:0,54,567	0/0:11,0:11:30.08:0,30,332	0/0:31,1:32:55.16:0,55,826	0/0:47,0:49:99:0,120,1283	0/0:23,0:23:42.08:0,42,665	0/0:26,0:26:37.90:0,38,608	0/0:29,0:29:81.18:0,81,866	0/0:17,0:17:45.12:0,45,498	0/0:15,0:15:42.11:0,42,464
chr10	73189892	.	A	AATAT	3227.04	PASS	AB=0.962;AC=18;AF=0.321;AN=56;BaseQRankSum=15.913;DP=611;FS=8.735;HRun=0;HaplotypeScore=125.4767;InbreedingCoeff=0.8834;MQ=66.55;MQ0=1;MQRankSum=-3.295;QD=13.79;ReadPosRankSum=2.641;VQSLOD=2.5004;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.24:0,87,1384	0/0:13,0:13:39.12:0,39,657	0/1:11,0:12:2.56:3,0,174	0/1:9,0:8:4.75:5,0,145	0/0:17,0:17:48.10:0,48,775	0/0:18,0:18:39.08:0,39,624	0/0:25,0:25:63.17:0,63,976	0/0:32,0:32:69.20:0,69,1053	0/0:19,0:19:48.11:0,48,732	1/1:4,13:19:42.05:840,42,0	1/1:4,13:18:32.79:602,33,0	1/1:5,0:32:55.12:250,55,0	1/1:7,0:32:50.26:228,50,0	0/0:12,0:12:30.09:0,30,475	0/0:25,0:25:72.20:0,72,1149	0/0:13,0:13:30.09:0,30,476	0/0:25,0:25:44.60:0,45,947	0/0:21,0:21:54.11:0,54,855	0/0:30,0:30:68.94:0,69,1091	0/0:20,0:20:51.14:0,51,789	0/0:18,0:18:54.14:0,54,812	1/1:3,0:19:38.74:174,39,0	1/1:6,0:33:58.80:274,59,0	1/1:9,0:44:81.14:370,81,0	1/1:5,10:15:27.09:688,27,0	0/0:25,0:25:69.18:0,69,1103	0/0:19,0:19:54.16:0,54,852	0/0:12,0:12:33.11:0,33,577
chr10	73190178	.	CAAAAAT	C	6485.02	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.196;DP=688;FS=7.371;HRun=0;HaplotypeScore=146.3228;InbreedingCoeff=0.9995;MQ=63.77;MQ0=3;MQRankSum=-15.236;QD=36.43;ReadPosRankSum=2.876;VQSLOD=4.4997;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,3084	0/0:11,0:11:30.10:0,30,949	0/0:15,0:13:36.11:0,36,885	0/0:21,0:14:29.92:0,30,581	0/0:26,0:26:63.14:0,63,1744	0/0:17,0:17:48.16:0,48,1477	0/0:24,0:24:63.16:0,63,1823	0/0:33,0:33:87.29:0,87,2409	0/0:14,0:14:42.14:0,42,1214	0/0:15,0:15:36.12:0,36,1205	0/0:21,0:21:60.09:0,60,1691	1/1:2,43:46:96.33:2085,96,0	1/1:4,32:36:69.24:1566,69,0	0/0:26,0:26:72.24:0,72,2403	0/0:26,0:26:75.17:0,75,1868	0/0:18,0:18:42.12:0,42,1277	0/0:35,0:35:87.27:0,87,2667	0/0:39,0:39:99:0,105,3082	0/0:16,0:16:42.11:0,42,1129	0/0:21,0:21:57.19:0,57,1886	0/0:12,0:12:36.12:0,36,1135	1/1:3,23:26:47.74:1050,48,0	1/1:8,26:34:53.92:1117,54,0	1/1:4,32:36:32.35:667,32,0	0/0:15,0:15:36.12:0,36,1187	0/0:19,0:19:54.18:0,54,1730	0/0:26,0:26:78.25:0,78,2362	0/0:23,0:23:69.20:0,69,1876
chr10	73190891	.	TTTAAAAAAA	T	919.84	PASS	AB=0.656;AC=6;AF=0.107;AN=56;BaseQRankSum=3.010;DP=304;FS=10.246;HRun=0;HaplotypeScore=69.5462;InbreedingCoeff=0.1350;MQ=42.18;MQ0=30;MQRankSum=-3.180;QD=20.91;ReadPosRankSum=0.808;VQSLOD=1.4592;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:10:24.08:0,24,880	0/0:3,0:3:9.03:0,9,425	0/0:11,0:2:6.02:0,6,106	0/0:3,0:1:3.01:0,3,35	0/0:14,0:13:21.03:0,21,700	0/0:14,0:14:39.13:0,39,1372	0/0:2,0:2:6.02:0,6,279	0/0:24,0:16:45.15:0,45,1718	0/0:5,0:5:12.04:0,12,408	0/0:6,0:5:15.05:0,15,599	0/0:7,0:6:12.04:0,12,460	0/1:3,3:6:99:160,0,224	0/1:9,6:15:99:195,0,864	0/0:9,0:8:21.07:0,21,791	0/0:5,0:5:12.04:0,12,478	0/0:9,0:8:21.07:0,21,917	0/0:27,0:23:51.17:0,51,2010	0/0:18,0:14:21.07:0,21,1015	0/0:8,0:7:18.06:0,18,702	0/0:6,0:6:16.61:0,17,424	0/0:3,0:3:6.02:0,6,220	0/1:2,3:4:99:123,0,107	0/1:5,6:11:99:390,0,395	1/1:5,1:3:9.03:176,9,0	0/0:25,0:22:60.16:0,60,2211	0/0:17,0:15:42.14:0,42,1768	0/0:16,0:15:42.14:0,42,1594	0/0:15,0:10:27.01:0,27,702
chr10	73190907	.	A	AGC	456.06	PASS	AB=0.741;AC=4;AF=0.071;AN=56;BaseQRankSum=-0.399;DP=378;FS=66.622;HRun=0;HaplotypeScore=56.9707;InbreedingCoeff=-0.0459;MQ=56.83;MQ0=14;MQRankSum=-4.462;QD=10.36;ReadPosRankSum=3.499;VQSLOD=0.7718;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:16:39.11:0,39,498	0/0:5,0:5:12.04:0,12,176	0/0:21,0:8:23.96:0,24,258	0/0:11,0:5:15.04:0,15,178	0/0:16,0:15:30.10:0,30,430	0/0:16,0:16:42.08:0,42,546	0/0:4,0:4:12.04:0,12,166	0/0:27,0:24:63.17:0,63,824	0/0:6,0:6:15.05:0,15,211	0/0:11,0:10:26.21:0,26,272	0/0:13,0:11:21.05:0,21,258	0/1:5,3:7:74.58:78,0,75	0/1:7,8:15:10.63:343,0,11	0/0:10,0:9:25.77:0,26,276	0/0:10,0:10:24.07:0,24,333	0/0:12,0:11:27.03:0,27,349	0/0:28,0:26:57:0,57,716	0/0:20,0:18:23.91:0,24,329	0/0:12,0:12:33.09:0,33,421	0/0:6,0:6:12.49:0,12,151	0/0:9,0:9:19.62:0,20,274	0/1:4,2:5:37.61:38,0,55	0/1:12,3:15:99:107,0,232	0/0:6,2:6:18.05:0,18,228	0/0:25,0:23:56.90:0,57,720	0/0:19,0:18:54.13:0,54,776	0/0:19,0:18:51.12:0,51,660	0/0:8,0:6:15.04:0,15,211
chr10	73191385	.	CT	C	7677.64	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=21.217;DP=817;FS=13.762;HRun=4;HaplotypeScore=119.3066;InbreedingCoeff=0.9985;MQ=89.14;MQ0=0;MQRankSum=-3.181;QD=31.21;ReadPosRankSum=3.646;VQSLOD=3.2521;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,49:52:99:1619,135,0	0/0:13,0:13:39.13:0,39,543	0/0:36,0:36:95.86:0,96,1249	0/0:29,0:29:72.71:0,73,999	0/0:27,0:27:81.27:0,81,1131	0/0:26,0:26:78.26:0,78,1092	0/0:22,0:22:63.21:0,63,882	0/0:35,0:35:93.31:0,93,1303	0/0:23,0:23:66.22:0,66,924	1/1:1,26:27:80.98:948,81,0	1/1:0,15:15:30.09:360,30,0	1/1:1,25:26:75.23:900,75,0	1/1:4,21:25:60.18:720,60,0	0/0:34,0:34:99:0,99,1383	0/0:53,0:53:99:0,157,2185	0/0:33,0:33:96.30:0,96,1312	0/0:31,0:31:87.29:0,87,1218	0/0:37,0:36:99:0,105,1402	0/0:21,0:21:60.19:0,60,823	0/0:30,0:30:87.29:0,87,1218	0/0:49,0:49:99:0,141,1975	1/1:1,25:26:69.21:828,69,0	1/1:0,24:24:63.19:755,63,0	1/1:1,28:29:75.23:900,75,0	1/1:2,20:22:54.16:648,54,0	0/0:24,2:26:17.58:0,18,948	0/0:33,0:33:96.30:0,96,1312	0/0:13,0:13:36.12:0,36,504
chr10	73191878	.	GACTAC	G	4665.80	PASS	AB=0.560;AC=9;AF=0.161;AN=56;BaseQRankSum=11.998;DP=735;FS=4.097;HRun=0;HaplotypeScore=150.0826;InbreedingCoeff=0.8768;MQ=66.31;MQ0=0;MQRankSum=-13.065;QD=45.74;ReadPosRankSum=0.514;VQSLOD=4.8787;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,135,4239	0/0:20,0:20:60.21:0,60,1887	0/0:30,0:28:64.61:0,65,2099	0/0:26,0:25:59.61:0,60,1860	0/0:23,0:23:69.24:0,69,2186	0/0:22,0:22:66.23:0,66,2047	0/0:23,0:23:69.24:0,69,2142	0/0:27,0:27:75.25:0,75,2310	0/0:28,0:28:84.27:0,84,2549	0/0:26,0:26:75.26:0,75,2371	0/0:16,0:16:48.16:0,48,1512	1/1:3,20:23:57.20:1236,57,0	1/1:5,24:29:66.23:1432,66,0	0/0:24,0:24:69.22:0,69,2107	0/0:40,0:40:99:0,117,3686	0/0:41,0:40:99:0,120,3782	0/0:34,0:34:96.33:0,96,3023	0/0:41,0:41:99:0,120,3620	0/0:30,0:30:90.31:0,90,2726	0/0:19,0:19:53.77:0,54,1642	0/0:39,0:39:99:0,117,3598	1/1:3,15:18:39.13:846,39,0	1/1:2,16:18:39.13:845,39,0	0/1:3,10:14:11.63:307,0,12	0/0:17,0:17:51.18:0,51,1618	0/0:29,0:29:87.30:0,87,2736	0/0:17,0:17:48.16:0,48,1520	0/0:12,0:12:36.12:0,36,1142
chr10	73192581	.	GGA	G	154.49	PASS	AB=1.000;AC=16;AF=0.308;AN=52;BaseQRankSum=0.970;DP=155;FS=17.493;HRun=0;HaplotypeScore=34.2957;InbreedingCoeff=0.6111;MQ=103.22;MQ0=1;MQRankSum=-0.289;QD=3.96;ReadPosRankSum=-1.376;VQSLOD=0.0105;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:8.93:63,9,0	0/0:3,0:3:5.98:0,6,70	0/0:23,0:12:23.04:0,23,240	0/1:15,0:13:0.99:1,0,200	0/0:3,0:3:8.98:0,9,101	0/0:7,0:7:12:0,12,123	0/0:5,0:5:14.93:0,15,189	0/0:10,0:10:27.05:0,27,327	0/0:4,0:4:12:0,12,133	1/1:0,4:4:8.57:70,9,0	./.	0/1:3,0:3:0.14:0,0,1	1/1:3,0:3:6:51,6,0	0/0:10,0:10:27.07:0,27,400	0/0:6,0:6:12.01:0,12,132	0/0:6,0:6:14.93:0,15,149	0/0:2,0:2:5.99:0,6,48	0/0:1,0:1:2.98:0,3,21	0/0:4,0:4:11.89:0,12,125	0/0:5,0:4:11.73:0,12,98	0/0:15,0:15:32.96:0,33,369	1/1:1,0:1:3:27,3,0	1/1:2,0:2:3:26,3,0	1/1:4,0:4:1.44:15,1,0	1/1:2,0:2:6:52,6,0	0/0:3,0:3:3:0,3,28	0/0:9,0:9:27.01:0,27,339	./.
chr10	73192582	.	GA	G	233.17	PASS	AC=16;AF=0.308;AN=52;BaseQRankSum=1.868;DP=154;FS=22.388;HRun=2;HaplotypeScore=30.3858;InbreedingCoeff=0.6758;MQ=103.74;MQ0=1;MQRankSum=-0.272;QD=10.14;ReadPosRankSum=-0.595;VQSLOD=-0.3904;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:11.92:87,12,0	0/0:3,0:3:5.93:0,6,60	0/0:19,0:11:15.17:0,15,158	0/0:14,0:13:21.51:0,22,191	0/0:3,0:3:8.98:0,9,86	0/0:7,0:7:11.99:0,12,102	0/0:5,0:5:10.60:0,11,127	0/0:10,0:10:27.05:0,27,277	0/0:4,0:4:9:0,9,88	1/1:4,0:4:8.97:70,9,0	./.	1/1:1,1:2:5.81:48,6,0	1/1:2,0:3:6:51,6,0	0/0:10,0:10:27.05:0,27,306	0/0:6,0:6:12.01:0,12,117	0/0:6,0:6:13.56:0,14,122	0/0:2,0:2:5.99:0,6,48	0/0:1,0:1:2.98:0,3,21	0/0:4,0:4:7.75:0,8,93	0/0:6,0:5:14.71:0,15,106	0/0:16,0:16:32.91:0,33,314	1/1:1,0:1:3:27,3,0	1/1:2,0:2:3:26,3,0	1/1:1,3:4:2.19:33,2,0	1/1:2,0:2:6:52,6,0	0/0:2,0:2:3:0,3,28	0/0:9,0:9:24:0,24,253	./.
chr10	73192723	.	AG	A	4552.15	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.275;DP=423;FS=14.053;HRun=2;HaplotypeScore=56.7005;InbreedingCoeff=0.9262;MQ=82.28;MQ0=0;MQRankSum=-2.842;QD=36.13;ReadPosRankSum=3.880;VQSLOD=4.0597;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,43:44:99:1519,117,0	0/0:5,0:5:12.04:0,12,180	0/0:21,0:21:42.29:0,42,562	0/0:29,0:28:66.18:0,66,818	0/0:5,0:5:12.04:0,12,180	0/0:11,0:11:33.11:0,33,495	0/0:21,0:21:60.18:0,60,859	0/0:30,0:30:90.30:0,90,1331	0/0:6,0:6:15.05:0,15,222	1/1:0,3:3:9.03:116,9,0	1/1:0,2:2:6.02:78,6,0	1/1:0,11:11:33.11:428,33,0	1/1:0,16:16:42.14:545,42,0	0/0:18,0:18:54.18:0,54,807	0/0:19,0:19:57.19:0,57,854	0/0:6,0:6:18.06:0,18,270	0/0:36,0:36:99:0,108,1619	0/0:19,0:19:57.19:0,57,854	0/0:9,0:9:27.09:0,27,405	0/0:4,0:4:12.04:0,12,180	0/0:33,0:33:96.29:0,96,1396	1/1:0,6:6:15.05:195,15,0	1/1:0,2:2:6.02:78,6,0	1/1:1,35:36:99:1360,105,0	1/1:0,6:6:18.06:234,18,0	0/0:9,0:9:27.08:0,27,386	0/0:13,0:13:39.12:0,39,560	0/0:3,0:3:9.03:0,9,135
chr10	73192951	.	CT	C	7641.72	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.259;DP=697;FS=0.000;HRun=3;HaplotypeScore=70.5314;InbreedingCoeff=0.9980;MQ=64.19;MQ0=6;MQRankSum=2.270;QD=33.37;ReadPosRankSum=1.455;VQSLOD=5.3015;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,48:49:99:1599,129,0	0/0:11,0:11:33.11:0,33,474	0/0:16,0:10:21.01:0,21,248	0/0:26,0:20:53.90:0,54,633	0/0:26,0:25:72.23:0,72,1020	0/0:21,0:21:60.20:0,60,864	0/0:37,0:37:99:0,108,1535	0/0:18,0:18:51.15:0,51,688	0/0:25,0:25:72.24:0,72,1034	1/1:0,17:17:51.15:620,51,0	1/1:0,6:6:18.06:223,18,0	1/1:0,29:29:84.26:1038,84,0	1/1:0,26:26:72.23:891,72,0	0/0:24,0:24:69.22:0,69,975	0/0:32,0:32:93.30:0,93,1322	0/0:19,0:19:57.19:0,57,820	0/0:41,0:41:99:0,111,1580	0/0:18,0:18:48.16:0,48,687	0/0:23,0:23:66.21:0,66,933	0/0:13,0:13:36.12:0,36,518	0/0:38,0:38:99:0,114,1597	1/1:1,14:14:42.13:521,42,0	1/1:0,29:29:75.21:929,75,0	1/1:3,35:38:93.29:1152,93,0	1/1:1,19:20:54.17:669,54,0	0/0:30,1:31:56.10:0,56,1225	0/0:38,0:38:99:0,114,1623	0/0:11,0:11:33.11:0,33,475
chr10	73196724	.	TA	T	6851.43	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.733;DP=634;FS=2.266;HRun=2;HaplotypeScore=73.2500;InbreedingCoeff=0.9950;MQ=76.20;MQ0=0;MQRankSum=-0.319;QD=37.03;ReadPosRankSum=2.436;VQSLOD=5.6399;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1708	0/0:12,0:12:36.12:0,36,539	0/0:10,0:10:27.07:0,27,354	0/0:15,0:15:12.32:0,12,524	0/0:21,0:21:63.21:0,63,943	0/0:15,0:15:45.14:0,45,656	0/0:22,0:22:66.22:0,66,989	0/0:20,0:20:60.19:0,60,865	0/0:23,0:23:69.23:0,69,1033	1/1:1,30:31:90.29:1166,90,0	1/1:1,18:19:51.17:662,51,0	1/1:0,17:17:48.16:623,48,0	1/1:0,24:24:66.21:856,66,0	0/0:26,0:26:78.25:0,78,1144	0/0:27,0:27:78.24:0,78,1124	0/0:20,0:20:60.18:0,60,861	0/0:25,0:25:69.21:0,69,1000	0/0:23,0:23:69.23:0,69,1034	0/0:19,0:19:57.13:0,57,742	0/0:23,0:23:69.21:0,69,990	0/0:31,0:31:87.29:0,87,1304	1/1:0,20:20:57.19:740,57,0	1/1:0,16:16:48.16:623,48,0	1/1:0,31:31:87.28:1130,87,0	1/1:0,27:27:81.26:1052,81,0	0/0:34,0:34:99:0,102,1488	0/0:25,0:25:75.25:0,75,1118	0/0:18,0:18:54.17:0,54,784
chr10	73197099	.	GC	G	7138.48	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=18.752;DP=681;FS=2.721;HRun=1;HaplotypeScore=83.7730;InbreedingCoeff=0.9998;MQ=72.81;MQ0=0;MQRankSum=-2.141;QD=39.44;ReadPosRankSum=1.528;VQSLOD=5.5301;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,2142	0/0:13,0:13:39.09:0,39,592	0/0:22,0:22:66.22:0,66,1046	0/0:16,0:16:30.14:0,30,570	0/0:16,0:16:45.15:0,45,710	0/0:22,0:22:66.18:0,66,1026	0/0:23,0:23:69.24:0,69,1100	0/0:30,0:30:84.28:0,84,1308	0/0:17,0:17:51.15:0,51,762	1/1:0,33:33:96.32:1340,96,0	1/1:0,11:11:30.10:412,30,0	1/1:0,28:28:69.23:965,69,0	1/1:0,23:23:66.22:923,66,0	0/0:39,0:39:99:0,117,1824	0/0:28,0:28:84.29:0,84,1341	0/0:23,0:23:69.24:0,69,1101	0/0:37,0:37:99:0,108,1693	0/0:26,0:26:69.23:0,69,1101	0/0:17,0:17:51.17:0,51,814	0/0:23,0:23:63.21:0,63,996	0/0:30,0:30:87.30:0,87,1383	1/1:0,17:17:48.16:669,48,0	1/1:0,14:14:42.14:586,42,0	1/1:0,37:37:99:1530,111,0	1/1:0,18:18:51.17:713,51,0	0/0:30,0:30:87.30:0,87,1388	0/0:19,0:19:57.14:0,57,881	0/0:23,0:23:69.24:0,69,1100
chr10	73197460	.	A	ACACAAG	2013.89	PASS	AB=0.555;AC=12;AF=0.214;AN=56;BaseQRankSum=6.703;DP=449;FS=2.903;HRun=0;HaplotypeScore=97.4957;InbreedingCoeff=0.5603;MQ=53.55;MQ0=20;MQRankSum=-7.523;QD=21.42;ReadPosRankSum=5.472;VQSLOD=2.6282;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,105,1979	0/0:7,0:7:21.07:0,21,500	0/0:22,0:8:20.43:0,20,334	0/0:17,0:7:14.73:0,15,207	0/0:15,0:15:45.15:0,45,971	0/0:16,0:14:36.08:0,36,802	0/0:22,0:21:42.09:0,42,794	0/0:34,0:32:84.22:0,84,1597	0/0:10,0:8:21.06:0,21,409	0/1:3,0:14:76.02:189,0,76	1/1:0,0:11:21.07:374,21,0	0/1:2,0:15:19.85:374,0,20	1/1:0,1:14:24.08:475,24,0	0/0:15,0:14:18.04:0,18,359	0/0:13,0:13:39.13:0,39,843	0/0:7,0:7:18.06:0,18,426	0/0:24,0:24:69.24:0,69,1529	0/0:21,0:17:39.11:0,39,855	0/0:28,0:26:66.21:0,66,1387	0/0:8,0:8:24.07:0,24,443	0/0:20,0:18:53.34:0,53,996	0/1:2,0:8:48.54:172,0,49	1/1:1,0:8:10.49:127,10,0	1/1:1,0:12:15.03:270,15,0	0/1:2,0:9:12.11:206,0,12	0/0:14,0:14:42.11:0,42,837	0/0:9,0:9:21.06:0,21,398	0/0:14,0:11:30.10:0,30,637
chr10	73197616	.	T	TA	4047.62	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.770;DP=401;FS=1.522;HRun=1;HaplotypeScore=54.0813;InbreedingCoeff=0.9928;MQ=76.04;MQ0=0;MQRankSum=-2.484;QD=44.97;ReadPosRankSum=2.108;VQSLOD=3.3137;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:24.07:0,24,319	0/0:5,0:5:15.05:0,15,210	0/0:17,0:13:39.12:0,39,520	0/0:18,0:17:45.14:0,45,594	0/0:13,0:13:36.10:0,36,483	0/0:21,0:21:63.21:0,63,881	0/0:11,0:11:33.11:0,33,462	0/0:42,0:42:99:0,126,1761	0/0:8,0:8:24.08:0,24,335	1/1:0,15:15:45.15:719,45,0	1/1:0,13:12:33.11:527,33,0	1/1:0,10:10:30.10:477,30,0	1/1:0,13:13:39.13:622,39,0	0/0:8,0:8:24.08:0,24,336	0/0:11,0:11:30.10:0,30,419	0/0:11,0:11:33.10:0,33,445	0/0:22,0:22:63.21:0,63,879	0/0:14,0:14:33.11:0,33,460	0/0:20,0:20:60.20:0,60,837	0/0:14,0:14:42.13:0,42,570	0/0:14,0:14:39.11:0,39,527	1/1:0,11:11:33.10:503,33,0	1/1:0,7:7:18.06:288,18,0	1/1:0,7:7:18.06:288,18,0	1/1:0,14:14:39.13:623,39,0	0/0:9,0:9:24.08:0,24,336	0/0:22,0:22:60.20:0,60,839	0/0:11,0:11:33.11:0,33,462
chr10	73197651	.	TTA	T	1727.67	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=7.853;DP=434;FS=3.134;HRun=0;HaplotypeScore=58.8562;InbreedingCoeff=0.9592;MQ=65.50;MQ0=10;MQRankSum=-2.107;QD=18.99;ReadPosRankSum=-1.321;VQSLOD=2.8382;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:19.31:0,19,281	0/0:5,0:5:13.62:0,14,98	0/0:47,0:13:17.10:0,17,176	0/0:43,0:10:13.66:0,14,86	0/0:13,0:13:31.32:0,31,362	0/0:24,0:24:65.84:0,66,682	0/0:8,0:8:23.64:0,24,256	0/0:32,0:31:89.87:0,90,837	0/0:7,0:7:20.93:0,21,199	1/1:12,1:16:44.90:403,45,0	1/1:9,2:17:41.78:350,42,0	1/1:4,1:6:14.92:120,15,0	1/1:6,2:9:23.11:168,23,0	0/0:9,0:9:18.92:0,19,235	0/0:3,0:3:9.02:0,9,110	0/0:11,0:11:30.06:0,30,346	0/0:16,0:16:39.04:0,39,468	0/0:13,0:13:17.97:0,18,195	0/0:18,0:18:46.41:0,46,478	0/0:13,0:13:30.41:0,30,285	0/0:3,0:3:9.01:0,9,82	1/1:5,1:7:17.80:129,18,0	1/1:4,1:6:14.73:96,15,0	1/1:7,1:9:23.92:209,24,0	1/1:14,2:20:59.52:456,60,0	0/0:20,0:20:45.47:0,45,510	0/0:20,0:19:31.98:0,32,410	0/0:11,0:11:30.22:0,30,355
chr10	73198985	.	GTT	G	3527.08	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.605;DP=707;FS=1.254;HRun=10;HaplotypeScore=99.5522;InbreedingCoeff=0.9978;MQ=80.34;MQ0=1;MQRankSum=-2.312;QD=27.13;ReadPosRankSum=1.993;VQSLOD=3.8407;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:46:97.83:0,98,374	0/0:14,0:14:42.12:0,42,623	0/0:24,0:25:34.18:0,34,654	0/0:17,0:17:27.09:0,27,416	0/0:27,0:28:75.18:0,75,1136	0/0:22,0:24:66.21:0,66,1010	0/0:16,0:16:39.13:0,39,610	0/0:33,0:33:81.25:0,81,1224	0/0:33,0:33:96.32:0,96,1497	0/0:3,0:25:52.40:0,52,180	0/0:2,0:20:42.89:0,43,157	1/1:1,18:19:42.11:468,42,0	1/1:0,22:22:66.18:736,66,0	0/0:30,0:30:69.21:0,69,1044	0/0:32,0:34:95.30:0,95,1443	0/0:19,0:19:54.17:0,54,835	0/0:26,0:26:69.18:0,69,1023	0/0:27,0:27:69.22:0,69,1069	0/0:19,0:20:48.12:0,48,693	0/0:24,0:26:65.16:0,65,901	0/0:31,0:33:84.27:0,84,1276	1/1:3,22:25:60.15:668,60,0	1/1:2,28:30:71.91:785,72,0	1/1:4,30:34:78.18:870,78,0	0/0:3,0:17:35.45:0,35,159	0/0:29,0:29:62.35:0,62,874	0/0:27,0:26:66.21:0,66,1023	0/0:6,0:6:18.06:0,18,286
chr10	73199277	.	CCCTGGGT	C	10144.61	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.488;DP=625;FS=11.956;HRun=0;HaplotypeScore=153.6122;InbreedingCoeff=0.9975;MQ=75.75;MQ0=0;MQRankSum=-16.391;QD=59.67;ReadPosRankSum=-0.926;VQSLOD=3.7926;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,3745	0/0:15,0:15:45.15:0,45,1739	0/0:12,0:12:27.08:0,27,720	0/0:19,0:19:57.20:0,57,1888	0/0:42,0:42:99:0,120,4528	0/0:18,0:18:51.17:0,51,1829	0/0:28,0:28:81.28:0,81,3157	0/0:34,0:34:96.32:0,96,3571	0/0:18,0:18:54.19:0,54,2058	1/1:3,23:26:66.19:1589,66,0	1/1:8,19:27:69.24:1721,69,0	1/1:2,18:20:57.20:1440,57,0	1/1:2,13:15:42.14:1053,42,0	0/0:16,0:16:45.15:0,45,1721	0/0:27,0:27:75.26:0,75,2897	0/0:21,0:21:60.21:0,60,2319	0/0:23,0:23:69.24:0,69,2681	0/0:19,0:19:54.16:0,54,1880	0/0:11,0:11:30.10:0,30,1069	0/0:28,0:28:75.25:0,75,2768	0/0:26,0:26:72.25:0,72,2736	1/1:3,18:21:57.20:1375,57,0	1/1:8,15:23:48.14:1145,48,0	1/1:4,14:17:18.01:445,18,0	1/1:3,17:20:57.20:1378,57,0	0/0:32,1:33:20.24:0,20,3426	0/0:19,0:19:57.20:0,57,2233	0/0:12,0:12:36.12:0,36,1385
chr10	73199280	.	TG	T	1755.34	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=17.205;DP=632;FS=10.170;HRun=3;HaplotypeScore=106.7202;InbreedingCoeff=0.9980;MQ=77.44;MQ0=0;MQRankSum=-15.950;QD=10.84;ReadPosRankSum=0.270;VQSLOD=0.8183;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1457	0/0:15,0:15:45.15:0,45,648	0/0:12,0:12:33.07:0,33,422	0/0:21,0:21:60.17:0,60,784	0/0:42,0:42:99:0,120,1681	0/0:21,0:21:57.19:0,57,817	0/0:27,0:27:81.27:0,81,1167	0/0:38,0:38:99:0,111,1565	0/0:18,0:18:54.18:0,54,774	1/1:24,0:24:53.39:195,53,0	1/1:21,3:24:59.44:359,59,0	1/1:19,1:20:46.91:208,47,0	1/1:15,0:15:34.47:163,34,0	0/0:16,0:16:48.05:0,48,654	0/0:28,0:28:81.27:0,81,1163	0/0:22,0:22:63.21:0,63,906	0/0:23,0:23:69.23:0,69,993	0/0:18,0:18:54.16:0,54,747	0/0:14,0:14:39.11:0,39,536	0/0:28,0:28:78.24:0,78,1086	0/0:27,0:27:75.25:0,75,1077	1/1:20,1:21:46.45:321,46,0	1/1:22,0:22:44.06:301,44,0	1/1:17,0:16:16.57:116,17,0	1/1:18,1:19:47.65:301,48,0	0/0:33,0:33:84.39:0,84,1285	0/0:19,0:19:57.19:0,57,820	0/0:12,0:12:36.12:0,36,518
chr10	73199344	.	TA	T	2791.60	PASS	AB=0.867;AC=17;AF=0.304;AN=56;BaseQRankSum=12.274;DP=593;FS=3.945;HRun=10;HaplotypeScore=75.0544;InbreedingCoeff=0.9135;MQ=69.62;MQ0=0;MQRankSum=-1.794;QD=16.33;ReadPosRankSum=3.683;VQSLOD=4.3077;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,1:46:99:0,100,1325	0/0:12,0:12:24.06:0,24,266	0/1:11,2:12:24.54:25,0,136	0/0:11,1:12:18.57:0,19,171	0/0:23,0:23:54.13:0,54,587	0/0:18,0:18:45.12:0,45,498	0/0:24,0:24:72.14:0,72,782	0/0:26,0:26:66.16:0,66,716	0/0:23,0:23:65.67:0,66,706	1/1:4,15:20:47.02:397,47,0	1/1:2,17:19:38.92:331,39,0	1/1:2,24:26:56.97:494,57,0	1/1:3,14:17:41.97:364,42,0	0/0:19,0:19:48.11:0,48,517	0/0:29,0:29:69.04:0,69,737	0/0:18,0:18:51.14:0,51,564	0/0:29,0:29:84.21:0,84,919	0/0:18,0:18:22.47:0,22,471	0/0:12,0:12:24.05:0,24,251	0/0:19,0:19:41.20:0,41,448	0/0:24,0:25:64.01:0,64,644	1/1:2,19:21:47.92:410,48,0	1/1:3,17:20:41.90:364,42,0	1/1:2,16:18:32.90:277,33,0	1/1:3,14:17:38.99:338,39,0	0/0:32,1:33:58.15:0,58,841	0/0:23,0:23:66.18:0,66,729	0/0:13,0:13:39.11:0,39,431
chr10	73202579	.	GCCA	G	1642.05	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=8.498;DP=377;FS=1.378;HRun=0;HaplotypeScore=60.2574;InbreedingCoeff=0.8244;MQ=70.87;MQ0=1;MQRankSum=-2.732;QD=18.66;ReadPosRankSum=2.890;VQSLOD=3.4247;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:17:47.71:0,48,754	0/0:7,0:7:17.92:0,18,222	0/1:11,0:10:9.03:9,0,237	0/0:13,0:12:26.95:0,27,350	0/0:12,0:12:21.02:0,21,308	0/0:21,0:21:54.11:0,54,808	0/0:22,0:22:53.91:0,54,751	0/0:16,0:16:42.07:0,42,584	0/0:9,0:9:18.01:0,18,233	1/1:0,8:8:14.79:101,15,0	1/1:1,5:6:2.55:50,3,0	1/1:7,8:15:41.97:544,42,0	1/1:6,7:14:32.95:460,33,0	0/0:14,0:14:37.29:0,37,552	0/0:17,0:17:45.13:0,45,799	0/0:26,0:26:66.08:0,66,969	0/0:22,0:22:60.12:0,60,1061	0/0:21,0:20:54.08:0,54,835	0/0:13,0:13:29.75:0,30,368	0/0:10,0:10:23.83:0,24,228	0/0:23,0:23:57.02:0,57,685	1/1:0,7:7:9.03:152,9,0	1/1:0,8:8:6.89:76,7,0	1/1:0,11:12:24.08:389,24,0	1/1:0,7:7:3.01:50,3,0	0/0:12,0:12:30.05:0,30,387	0/0:10,0:10:30.10:0,30,499	0/0:4,0:4:11.99:0,12,147
chr10	73202581	.	CA	C	796.19	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=9.981;DP=367;FS=10.179;HRun=1;HaplotypeScore=49.6280;InbreedingCoeff=0.7790;MQ=68.65;MQ0=1;MQRankSum=-2.621;QD=8.95;ReadPosRankSum=4.145;VQSLOD=0.3959;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,2:18:18.82:0,19,423	0/0:6,0:6:17.74:0,18,142	0/0:10,0:10:4.07:0,4,184	0/0:10,1:10:8.36:0,8,251	0/1:11,0:11:2:2,0,124	0/0:18,0:18:47.95:0,48,468	0/0:21,1:22:22.55:0,23,387	0/0:15,0:15:44.65:0,45,404	0/0:8,0:8:17.95:0,18,147	1/1:8,0:8:14.79:102,15,0	1/1:5,1:6:2.71:21,3,0	1/1:16,0:16:41.70:311,42,0	1/1:13,1:14:32.71:238,33,0	0/0:14,0:14:36.58:0,37,343	0/0:16,0:16:43.19:0,43,442	0/0:23,0:23:58.31:0,58,583	0/0:21,0:21:59.96:0,60,609	0/0:22,0:21:53.74:0,54,519	0/0:14,0:13:29.72:0,30,280	0/0:9,0:9:1.05:0,1,146	0/0:24,0:24:50.23:0,50,420	1/1:7,0:7:8.93:65,9,0	1/1:8,0:8:6.85:47,7,0	1/1:12,0:12:23.85:174,24,0	1/1:7,0:7:2.98:21,3,0	0/0:12,0:12:29.99:0,30,283	0/0:10,0:10:29.37:0,29,243	0/0:4,0:4:11.97:0,12,107
chr10	73202790	.	GTCT	G	2727.71	PASS	AB=0.923;AC=15;AF=0.268;AN=56;BaseQRankSum=15.642;DP=741;FS=0.000;HRun=0;HaplotypeScore=143.8905;InbreedingCoeff=0.8889;MQ=64.96;MQ0=0;MQRankSum=-1.722;QD=16.73;ReadPosRankSum=2.406;VQSLOD=2.9533;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:51:99:0,152,2845	0/0:8,0:8:24.08:0,24,543	0/0:31,0:23:66.11:0,66,1337	0/0:25,0:23:56.82:0,57,976	0/0:29,0:29:75.26:0,75,1752	0/0:27,0:27:81.28:0,81,1882	0/0:26,0:26:78.22:0,78,1724	0/0:35,0:35:99:0,105,2429	0/0:22,0:22:66.20:0,66,1445	1/1:12,9:20:31.39:376,31,0	1/1:10,4:14:16.73:129,17,0	1/1:14,10:24:34.41:408,34,0	1/1:6,17:23:27.61:556,28,0	0/0:23,0:23:69.22:0,69,1607	0/0:28,0:28:81.28:0,81,1899	0/0:20,0:20:60.21:0,60,1430	0/0:44,0:44:99:0,129,3030	0/0:31,0:30:87.25:0,87,1934	0/0:26,0:26:78.27:0,78,1806	0/0:18,0:18:54.19:0,54,1261	0/0:67,0:67:99:0,202,4587	1/1:6,5:11:6.95:86,7,0	0/1:11,1:12:32.19:52,0,32	1/1:15,28:43:97.23:1115,97,0	1/1:9,6:15:29.06:203,29,0	0/0:36,0:36:99:0,108,2546	0/0:24,0:24:72.25:0,72,1712	0/0:6,0:6:18.06:0,18,426
chr10	73202794	.	GT	G	1244.63	PASS	AB=0.747;AC=11;AF=0.196;AN=56;BaseQRankSum=13.927;DP=729;FS=7.160;HRun=1;HaplotypeScore=117.7827;InbreedingCoeff=0.4142;MQ=65.80;MQ0=0;MQRankSum=-2.195;QD=7.68;ReadPosRankSum=6.019;VQSLOD=0.8344;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:99:0,142,956	0/0:8,0:8:24.08:0,24,380	0/0:31,0:24:66.17:0,66,976	0/0:21,0:19:44.35:0,44,608	0/0:29,0:29:75.26:0,75,1193	0/0:27,0:27:81.28:0,81,1289	0/0:26,0:26:75.26:0,75,1197	0/0:37,0:37:99:0,111,1721	0/0:19,0:19:57.19:0,57,911	0/1:12,9:20:15.58:135,0,16	1/1:11,4:15:4.07:47,4,0	0/1:16,10:26:65.89:164,0,66	1/1:4,17:21:25.54:303,26,0	0/0:23,0:23:69.24:0,69,1099	0/0:27,0:27:81.28:0,81,1287	0/0:19,0:19:57.19:0,57,909	0/0:43,0:43:99:0,126,2014	0/0:29,0:28:81.28:0,81,1287	0/0:26,0:26:78.27:0,78,1241	0/0:19,0:19:57.19:0,57,907	0/0:64,0:64:99:0,190,2971	0/1:6,5:11:16.40:16,0,28	0/1:9,1:10:7.15:7,0,38	1/1:15,28:43:59.84:642,60,0	0/1:9,6:15:13.62:89,0,14	0/0:36,0:36:99:0,108,1720	0/0:25,0:25:75.26:0,75,1195	0/0:8,0:8:24.08:0,24,369
chr10	73203335	.	T	TG	3056.76	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.750;DP=600;FS=7.653;HRun=6;HaplotypeScore=74.3172;InbreedingCoeff=0.9332;MQ=81.18;MQ0=0;MQRankSum=-0.794;QD=25.47;ReadPosRankSum=0.672;VQSLOD=3.7001;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1130	0/0:6,0:6:15.03:0,15,153	0/0:28,0:27:46.45:0,46,556	0/0:24,0:23:2.51:0,3,290	0/0:27,0:27:72.15:0,72,728	0/0:21,0:21:54.10:0,54,543	0/0:27,0:27:75.17:0,75,765	0/0:20,0:20:51.10:0,51,515	0/0:22,0:22:60.12:0,60,607	1/1:5,17:22:54.17:674,54,0	1/1:3,8:11:24.55:302,25,0	1/1:1,11:12:21.07:264,21,0	1/1:3,15:18:33.10:415,33,0	0/0:19,0:19:54.08:0,54,540	0/0:19,0:19:54.11:0,54,546	0/0:20,0:20:60.11:0,60,604	0/0:45,0:45:99:0,126,1276	0/0:26,0:26:78.14:0,78,784	0/0:19,0:19:54.11:0,54,546	0/0:26,0:26:75.17:0,75,765	0/0:20,0:20:54.12:0,54,550	1/1:0,14:14:36.11:451,36,0	1/1:2,12:14:27.09:339,27,0	1/1:2,12:14:2.50:346,3,0	1/1:0,15:15:41.86:465,42,0	0/0:26,0:26:75.16:0,75,760	0/0:35,0:35:99:0,102,1039	0/0:12,0:12:35.95:0,36,328
chr10	73203470	.	CCTGCACTG	C	7121.67	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.151;DP=615;FS=3.845;HRun=0;HaplotypeScore=166.0657;InbreedingCoeff=0.9854;MQ=70.20;MQ0=1;MQRankSum=-13.215;QD=57.90;ReadPosRankSum=-0.934;VQSLOD=4.3054;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,4521	0/0:9,0:9:24.08:0,24,972	0/0:10,0:10:29.59:0,30,1111	0/0:22,0:22:54.09:0,54,1633	0/0:24,0:24:72.23:0,72,3025	0/0:13,0:13:33.11:0,33,1436	0/0:22,0:22:57.20:0,57,2286	0/0:30,0:30:81.26:0,81,3214	0/0:26,0:26:75.26:0,75,3264	1/1:0,15:15:42.12:989,42,0	1/1:1,8:7:15.05:412,15,0	1/1:5,16:21:54.19:1484,54,0	1/1:1,15:16:45.15:1237,45,0	0/0:32,0:32:93.32:0,93,3953	0/0:22,0:22:60.21:0,60,2470	0/0:20,0:20:60.19:0,60,2477	0/0:39,0:39:99:0,111,4830	0/0:32,0:32:84.29:0,84,3542	0/0:18,0:18:51.17:0,51,1907	0/0:17,0:17:51.18:0,51,2216	0/0:59,0:58:99:0,163,6994	1/1:2,15:17:30.10:824,30,0	1/1:1,10:11:24.08:659,24,0	1/1:2,22:24:39.18:1022,39,0	1/1:1,9:10:18.06:495,18,0	0/0:28,0:28:81.28:0,81,3464	0/0:27,0:27:75.26:0,75,3040	0/0:3,0:3:9.03:0,9,391
chr10	73203740	.	GT	G	1811.86	PASS	AB=0.941;AC=8;AF=0.143;AN=56;BaseQRankSum=11.747;DP=668;FS=21.669;HRun=7;HaplotypeScore=86.1753;InbreedingCoeff=0.7004;MQ=67.06;MQ0=0;MQRankSum=0.296;QD=15.23;ReadPosRankSum=-0.032;VQSLOD=2.0952;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:87.26:0,87,1077	0/0:15,0:15:45.13:0,45,554	0/0:10,0:8:10.21:0,10,127	0/1:13,0:13:17.39:17,0,81	0/0:31,0:31:84.26:0,84,1042	0/0:13,0:13:36.08:0,36,436	0/0:19,0:19:54.15:0,54,655	0/0:42,0:42:99:0,108,1312	0/0:30,0:30:87.25:0,87,1069	1/1:2,27:29:81.14:815,81,0	1/1:2,15:17:42.09:428,42,0	0/0:25,0:25:63.03:0,63,748	0/0:25,0:25:69.11:0,69,812	0/0:26,0:26:66.21:0,66,830	0/0:31,0:30:90.28:0,90,1119	0/0:23,0:22:63.18:0,63,768	0/0:26,0:25:69.22:0,69,867	0/0:19,0:19:48.08:0,48,571	0/0:25,0:24:60.15:0,60,707	0/0:26,0:26:69.19:0,69,841	0/0:18,0:18:51.12:0,51,623	0/0:18,0:18:44.88:0,45,461	0/0:25,0:25:45.13:0,45,552	0/0:18,0:18:51.15:0,51,629	1/1:4,26:30:66.15:673,66,0	0/1:26,4:30:32.25:32,0,822	0/0:35,0:35:96.29:0,96,1189	0/0:12,0:12:33.11:0,33,415
chr10	73203930	.	G	GT	2430.91	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.388;DP=675;FS=31.767;HRun=5;HaplotypeScore=105.3614;InbreedingCoeff=0.9556;MQ=67.71;MQ0=1;MQRankSum=-8.908;QD=23.37;ReadPosRankSum=-0.199;VQSLOD=1.5337;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:96.23:0,96,1024	0/0:13,0:13:36.09:0,36,387	0/0:17,0:16:27.99:0,28,233	0/0:15,1:14:2.27:0,2,224	0/0:31,0:31:81.20:0,81,871	0/0:20,0:20:54.14:0,54,580	0/0:18,0:18:51.11:0,51,539	0/0:38,0:38:99:0,102,1087	0/0:29,0:29:87.20:0,87,925	0/0:33,0:33:93.23:0,93,994	0/0:25,0:25:69.16:0,69,734	1/1:7,16:23:56.57:662,57,0	1/1:6,17:24:58.06:708,58,0	0/0:23,0:23:66.17:0,66,708	0/0:21,0:21:63.14:0,63,669	0/0:15,0:15:42.09:0,42,443	0/0:28,0:28:78.18:0,78,830	0/0:25,0:25:61.35:0,61,661	0/0:17,0:17:42.10:0,42,452	0/0:32,0:32:84.21:0,84,903	0/0:22,0:22:57.14:0,57,612	1/1:3,15:17:38.95:420,39,0	1/1:8,14:22:39.87:429,40,0	1/1:5,12:17:32.63:386,33,0	0/0:28,0:28:75.19:0,75,806	0/0:27,0:27:75.18:0,75,800	0/0:30,0:30:84.21:0,84,902	0/0:26,0:26:72.17:0,72,766
chr10	73203974	.	A	AT	9216.51	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=10.173;DP=716;FS=6.597;HRun=5;HaplotypeScore=88.7160;InbreedingCoeff=0.9991;MQ=59.41;MQ0=1;MQRankSum=-0.618;QD=33.39;ReadPosRankSum=2.548;VQSLOD=5.0767;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,35:35:87.28:1130,87,0	0/0:7,0:7:21.05:0,21,226	0/0:14,0:12:27.05:0,27,281	0/0:17,0:16:48.10:0,48,499	0/0:25,0:25:69.15:0,69,732	0/0:22,0:22:60.15:0,60,645	0/0:21,0:21:60.13:0,60,636	0/0:37,0:37:87.20:0,87,928	0/0:31,0:31:87.22:0,87,935	1/1:2,35:38:99:1363,105,0	1/1:1,28:29:81.26:1063,81,0	1/1:1,33:34:84.27:1099,84,0	1/1:3,16:18:42.14:552,42,0	0/0:24,0:24:63.16:0,63,677	0/0:24,0:24:69.17:0,69,742	0/0:22,0:22:63.16:0,63,677	0/0:26,0:26:69.17:0,69,741	1/1:0,26:26:75.24:985,75,0	0/0:24,0:24:69.16:0,69,733	0/0:34,0:34:99:0,99,1054	0/0:13,0:13:39.05:0,39,401	1/1:2,19:20:48.16:629,48,0	1/1:0,22:22:63.20:827,63,0	1/1:3,12:15:30.10:390,30,0	1/1:3,33:36:90.29:1178,90,0	0/0:29,1:30:41.71:0,42,792	0/0:51,0:51:99:0,153,1635	0/0:18,0:18:48.12:0,48,516
chr10	73204085	.	CTCCATTCTTTTGGGGTGACTCTGCCAACAGGGGACAGGT	C	6041.46	PASS	AB=0.625;AC=13;AF=0.232;AN=56;BaseQRankSum=7.420;DP=592;FS=0.811;HRun=0;HaplotypeScore=453.9355;InbreedingCoeff=0.7863;MQ=58.13;MQ0=5;MQRankSum=-6.669;QD=69.44;ReadPosRankSum=4.584;VQSLOD=1.8263;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:16:6.02:595,6,0	0/0:17,0:17:42.12:0,42,6104	0/0:28,0:2:6.02:0,6,288	0/0:24,0:6:6.02:0,6,340	0/0:29,0:29:81.28:0,81,10178	0/0:16,0:16:45.15:0,45,6754	0/0:21,0:21:51.16:0,51,5558	0/0:37,0:37:87.27:0,87,6886	0/0:19,0:19:54.19:0,54,7884	0/0:30,0:28:81.28:0,81,10093	0/0:25,0:23:60.21:0,60,8092	1/1:6,1:6:6.02:374,6,0	1/1:1,14:15:18.06:1788,18,0	0/0:20,0:20:60.21:0,60,8655	0/0:26,0:26:69.24:0,69,9495	0/0:19,0:19:48.16:0,48,6459	0/0:14,0:14:33.11:0,33,4365	0/1:4,6:10:71.71:587,0,72	0/0:19,0:19:51.14:0,51,6488	0/0:27,0:27:75.22:0,75,9308	0/0:36,0:35:93.29:0,93,13646	1/1:2,16:18:11.96:911,12,0	1/1:1,11:12:9.03:894,9,0	1/1:2,7:9:9.03:894,9,0	0/0:20,0:20:54.19:0,54,7322	0/0:32,0:32:93.29:0,93,10336	0/0:33,0:33:84.29:0,84,12184	0/0:13,0:13:30.07:0,30,3668
chr10	73204225	.	A	AG	1782.37	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.404;DP=695;FS=1.215;HRun=1;HaplotypeScore=78.5789;InbreedingCoeff=0.9655;MQ=63.23;MQ0=2;MQRankSum=-5.526;QD=20.73;ReadPosRankSum=-3.264;VQSLOD=2.9046;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,144,1869	0/0:7,0:7:21.07:0,21,273	0/0:15,0:12:33.11:0,33,429	0/0:17,0:10:30.09:0,30,374	0/0:22,0:22:60.19:0,60,779	0/0:27,0:27:72.23:0,72,935	0/0:35,0:35:99:0,105,1349	0/0:35,0:35:99:0,105,1338	0/0:21,0:21:63.20:0,63,816	0/0:33,0:33:93.23:0,93,1166	0/0:19,0:19:57.19:0,57,739	1/1:3,30:26:51.17:763,51,0	1/1:0,19:17:36.12:539,36,0	0/0:26,0:26:78.25:0,78,1011	0/0:34,0:34:99:0,102,1324	0/0:24,0:24:72.22:0,72,920	0/0:38,0:38:99:0,111,1412	0/0:28,0:28:81.22:0,81,1033	0/0:26,0:25:69.22:0,69,894	0/0:16,0:16:48.11:0,48,603	0/0:35,0:35:99:0,105,1348	1/1:0,11:7:6.02:90,6,0	1/1:1,7:7:12.04:179,12,0	1/1:2,13:15:27.05:379,27,0	0/0:24,0:24:69.22:0,69,895	0/0:30,0:30:90.29:0,90,1169	0/0:39,0:39:99:0,117,1519	0/0:7,0:7:21.07:0,21,273
chr10	73204427	.	GT	G	1731.79	PASS	AB=0.833;AC=9;AF=0.161;AN=56;BaseQRankSum=9.692;DP=553;FS=3.624;HRun=9;HaplotypeScore=84.8741;InbreedingCoeff=0.8572;MQ=59.09;MQ0=4;MQRankSum=-3.688;QD=18.23;ReadPosRankSum=1.740;VQSLOD=3.9018;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:12.29:0,12,245	0/0:14,0:14:41.86:0,42,461	0/0:10,0:7:17.19:0,17,124	0/0:12,0:8:12.14:0,12,98	0/0:28,0:27:75.22:0,75,865	0/0:16,0:17:38.93:0,39,413	0/0:16,0:16:30.09:0,30,346	0/0:23,0:23:60.17:0,60,682	0/0:19,0:19:54.15:0,54,615	1/1:1,26:25:48.82:622,49,0	1/1:2,24:25:60:549,60,0	0/0:13,0:10:24.04:0,24,263	0/0:19,0:18:48.03:0,48,509	0/0:15,0:15:39.10:0,39,440	0/0:17,0:17:45.13:0,45,519	0/0:15,0:15:39.12:0,39,450	0/0:20,0:20:54.15:0,54,611	1/1:6,15:20:27.63:396,28,0	0/0:20,0:17:39.08:0,39,436	0/0:31,0:31:72.20:0,72,818	0/0:24,1:25:29.67:0,30,568	0/0:15,0:14:39.07:0,39,435	0/0:21,0:21:51.13:0,51,577	0/0:27,0:27:57.08:0,57,623	1/1:4,12:16:35.91:318,36,0	0/0:25,0:25:75.17:0,75,839	0/0:26,0:26:69.13:0,69,761	0/1:4,1:5:12.41:12,0,123
chr10	73204432	.	TTTTTG	T	810.98	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.958;DP=568;FS=1.823;HRun=0;HaplotypeScore=134.1004;InbreedingCoeff=0.9196;MQ=57.39;MQ0=5;MQRankSum=-4.918;QD=24.58;ReadPosRankSum=-2.039;VQSLOD=3.0000;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,13:31:62.74:906,63,0	0/0:15,0:15:33.09:0,33,719	0/0:12,0:6:11.92:0,12,148	0/0:16,0:8:11.59:0,12,109	0/0:30,0:29:84.18:0,84,1970	0/0:19,0:19:44.79:0,45,961	0/0:14,0:14:27.09:0,27,692	0/0:26,0:25:49.02:0,49,1070	0/0:20,0:20:45.14:0,45,1107	0/0:30,0:28:75.25:0,75,1210	0/0:27,0:26:68.88:0,69,1010	0/0:12,0:10:21.07:0,21,568	0/0:19,0:18:45.15:0,45,1077	0/0:15,0:15:30.09:0,30,696	0/0:15,0:15:45.15:0,45,1107	0/0:14,0:14:39.12:0,39,1005	0/0:20,0:20:51.17:0,51,1221	0/0:20,0:18:44.98:0,45,677	0/0:21,0:18:36.09:0,36,760	0/0:30,0:30:75.24:0,75,1797	0/0:28,0:28:65.74:0,66,1185	0/0:15,0:14:39.13:0,39,887	0/0:21,0:21:45.14:0,45,1022	0/0:26,0:26:40.11:0,40,965	0/0:16,0:16:42.12:0,42,629	0/0:25,0:25:60.20:0,60,1605	0/0:24,0:24:54.15:0,54,1321	0/0:5,0:5:15.05:0,15,389
chr10	73204468	.	G	GT	3683.01	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=10.537;DP=577;FS=1.254;HRun=8;HaplotypeScore=89.1480;InbreedingCoeff=0.9005;MQ=50.83;MQ0=20;MQRankSum=-11.230;QD=15.28;ReadPosRankSum=1.335;VQSLOD=3.7765;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:28:60.12:667,60,0	0/0:7,0:7:17.98:0,18,155	0/0:28,0:3:5.05:0,5,48	0/1:41,0:9:20.68:21,0,110	0/0:27,0:25:66.03:0,66,603	0/0:16,0:15:32.99:0,33,295	0/0:15,0:15:33.02:0,33,301	0/0:32,0:29:56.98:0,57,521	0/0:16,0:16:41.99:0,42,377	1/1:9,0:23:40.03:216,40,0	1/1:12,0:23:40.85:241,41,0	1/1:5,9:14:35.92:372,36,0	1/1:5,15:20:48.10:531,48,0	0/0:10,0:10:30.02:0,30,274	0/0:21,0:20:42.64:0,43,386	0/0:14,0:14:23.22:0,23,199	0/0:22,0:21:57.01:0,57,516	1/1:9,9:16:17.28:340,17,0	0/0:21,0:14:35.80:0,36,315	0/0:27,0:26:65.98:0,66,594	0/0:22,0:22:53.99:0,54,482	1/1:8,7:14:21.06:235,21,0	1/1:2,12:14:27.08:311,27,0	1/1:2,19:21:48.14:553,48,0	1/1:8,0:17:38.09:196,38,0	0/0:27,0:26:57:0,57,517	0/0:23,0:22:49.72:0,50,431	0/0:8,0:7:15.01:0,15,136
chr10	73204482	.	GT	G	794.83	PASS	AB=0.740;AC=16;AF=0.286;AN=56;BaseQRankSum=2.148;DP=556;FS=15.696;HRun=14;HaplotypeScore=88.2592;InbreedingCoeff=0.4813;MQ=49.10;MQ0=25;MQRankSum=0.341;QD=3.80;ReadPosRankSum=1.832;VQSLOD=-0.0463;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,2:26:13.51:0,14,275	0/0:6,0:6:17.75:0,18,147	0/0:28,0:3:0:0,0,0	0/0:36,0:9:3.95:0,4,23	0/0:21,1:24:14.30:0,14,269	0/0:12,1:18:11.78:0,12,222	0/0:17,0:19:12.28:0,12,241	0/0:26,0:24:17.98:0,18,160	0/0:14,0:14:26.97:0,27,238	0/1:18,1:23:1.03:28,0,1	0/1:9,2:16:12.87:20,0,13	0/0:14,0:14:25.23:0,25,158	0/0:14,0:18:25.94:0,26,148	0/1:11,1:12:12.69:13,0,151	0/0:16,1:16:6.44:0,6,194	0/0:15,0:14:12:0,12,105	0/0:22,2:24:18.72:0,19,438	1/1:14,0:15:8.92:34,9,0	0/1:10,5:15:6.65:91,0,7	0/1:14,11:24:15.58:101,0,16	1/1:5,16:21:26.10:255,26,0	0/0:8,0:9:13.63:0,14,80	0/0:14,0:15:17.13:0,17,98	0/0:20,0:21:26.22:0,26,158	1/1:10,0:16:9.36:27,9,0	0/1:13,10:22:1.24:134,0,1	1/1:9,13:22:9.74:203,10,0	1/1:5,2:6:8.87:62,9,0
chr10	73204809	.	C	CA	4756.09	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.772;DP=555;FS=17.666;HRun=2;HaplotypeScore=69.9997;InbreedingCoeff=0.9610;MQ=65.55;MQ0=1;MQRankSum=-1.345;QD=41.36;ReadPosRankSum=2.161;VQSLOD=2.9603;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:75.25:1128,75,0	0/0:8,0:8:24.08:0,24,336	0/0:14,0:14:32.92:0,33,410	0/0:5,0:5:3.23:0,3,93	0/0:28,0:28:81.27:0,81,1123	0/0:15,0:15:45.15:0,45,618	0/0:22,0:22:66.22:0,66,918	0/0:25,0:24:66.21:0,66,903	0/0:20,0:20:51.56:0,52,749	1/1:0,21:21:57.19:858,57,0	1/1:2,15:17:45.08:647,45,0	0/0:17,0:17:48.15:0,48,653	0/0:13,0:13:36.11:0,36,486	0/0:24,0:24:69.22:0,69,945	0/0:15,0:15:45.15:0,45,629	0/0:21,0:21:60.20:0,60,834	0/0:28,0:28:81.24:0,81,1113	1/1:0,25:25:75.25:1132,75,0	0/0:20,0:20:57.19:0,57,793	0/0:35,0:35:93.30:0,93,1283	0/0:21,0:21:60.19:0,60,817	0/0:11,0:11:30.10:0,30,419	0/0:20,0:20:60.20:0,60,830	0/0:14,0:14:42.14:0,42,587	1/1:0,22:22:66.22:991,66,0	0/0:19,0:19:54.01:0,54,727	0/0:31,0:31:93.31:0,93,1288	0/0:14,0:14:42.14:0,42,581
chr10	73204877	.	CA	C	1574.38	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.875;DP=637;FS=21.912;HRun=1;HaplotypeScore=88.0683;InbreedingCoeff=0.9963;MQ=83.59;MQ0=0;MQRankSum=-1.668;QD=37.49;ReadPosRankSum=2.022;VQSLOD=1.8887;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1892	0/0:11,0:11:33.11:0,33,527	0/0:17,0:17:38.30:0,38,626	0/0:28,0:28:72.15:0,72,1060	0/0:34,0:34:99:0,102,1604	0/0:24,0:23:72.23:0,72,1124	0/0:29,0:29:87.28:0,87,1366	0/0:36,0:36:99:0,105,1593	0/0:16,0:16:42.14:0,42,671	1/1:1,15:16:48.16:670,48,0	1/1:0,18:18:51.17:712,51,0	0/0:20,0:20:57.18:0,57,887	0/0:15,0:15:45.14:0,45,695	0/0:27,0:27:81.26:0,81,1269	0/0:21,0:21:63.21:0,63,1005	0/0:26,0:26:78.27:0,78,1246	0/0:31,0:31:93.32:0,93,1480	0/0:29,0:29:84.29:0,84,1339	0/0:23,0:23:66.22:0,66,1052	0/0:34,0:34:99:0,99,1575	0/0:21,0:21:63.21:0,63,1007	0/0:13,0:13:33.11:0,33,526	0/0:22,0:21:54.18:0,54,859	0/0:18,0:18:54.18:0,54,863	1/1:1,7:8:24.08:335,24,0	0/0:19,1:20:18.24:0,18,867	0/0:24,0:24:72.21:0,72,1098	0/0:15,0:15:45.15:0,45,718
chr10	73205197	.	A	AGGTCTAT	12194.02	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-1.965;DP=771;FS=2.212;HRun=0;HaplotypeScore=179.3702;InbreedingCoeff=0.9997;MQ=89.01;MQ0=0;MQRankSum=-16.391;QD=81.29;ReadPosRankSum=0.107;VQSLOD=5.0156;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,99,2445	0/0:9,0:9:27.08:0,27,623	0/0:33,0:33:78.21:0,78,1687	0/0:29,0:29:60.18:0,60,1341	0/0:23,0:23:63.22:0,63,1538	0/0:35,0:35:99:0,102,2495	0/0:24,0:24:57.20:0,57,1396	0/0:34,0:33:93.32:0,93,2234	0/0:26,0:26:69.22:0,69,1611	0/0:33,0:33:87.30:0,87,2147	0/0:26,0:26:69.24:0,69,1666	1/1:16,24:41:99:3662,99,0	1/1:5,27:33:87.25:3097,87,0	0/0:25,0:25:66.21:0,66,1578	0/0:44,0:44:99:0,129,3121	0/0:23,0:23:66.20:0,66,1577	0/0:22,0:22:66.23:0,66,1621	0/0:22,0:22:66.23:0,66,1612	0/0:13,0:13:39.11:0,39,846	0/0:35,0:35:96.33:0,96,2283	0/0:29,0:29:81.28:0,81,1969	1/1:5,14:22:51.15:1974,51,0	1/1:9,20:31:56.48:2064,56,0	1/1:8,15:23:36.12:1397,36,0	0/0:20,0:20:57.17:0,57,1324	0/0:40,0:40:99:0,108,2613	0/0:26,0:26:72.25:0,72,1798	0/0:12,0:12:36.12:0,36,894
chr10	73206317	.	TC	T	4550.23	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.193;DP=783;FS=4.681;HRun=5;HaplotypeScore=82.4252;InbreedingCoeff=1.0000;MQ=84.30;MQ0=0;MQRankSum=-1.373;QD=28.44;ReadPosRankSum=2.707;VQSLOD=5.2925;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,37:42:99:1191,105,0	0/0:17,0:17:51.14:0,51,677	0/0:27,1:28:48.40:0,48,878	0/0:28,0:28:74.82:0,75,891	0/0:32,0:32:90.30:0,90,1227	0/0:22,0:22:60.18:0,60,790	0/0:28,0:28:75.25:0,75,1020	0/0:18,0:18:45.14:0,45,600	0/0:36,0:36:99:0,105,1435	0/0:28,0:28:84.25:0,84,1084	0/0:18,0:18:54.18:0,54,737	1/1:2,19:21:54.15:612,54,0	1/1:0,20:20:50.98:577,51,0	0/0:22,0:22:63.19:0,63,844	0/0:29,0:29:81.27:0,81,1107	0/0:36,0:36:99:0,99,1335	0/0:27,0:27:75.25:0,75,1026	0/0:26,0:26:75.21:0,75,997	0/0:30,0:30:87.17:0,87,1117	0/0:31,0:31:90.27:0,90,1198	0/0:49,0:49:99:0,141,1894	1/1:0,23:23:63.06:672,63,0	1/1:1,28:29:81.23:919,81,0	1/1:3,22:25:51.14:579,51,0	0/0:30,0:30:84.28:0,84,1148	0/0:37,0:37:99:0,108,1476	0/0:32,0:31:93.29:0,93,1253	0/0:19,0:19:54.18:0,54,738
chr10	73207363	.	CCTCTCTCTCTCTCTCTCTCTCT	C	97.46	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.660;DP=569;FS=0.000;HRun=0;HaplotypeScore=258.4015;InbreedingCoeff=0.5994;MQ=66.80;MQ0=19;MQRankSum=-1.399;QD=3.75;ReadPosRankSum=1.080;VQSLOD=2.1502;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,17:26:3.01:175,3,0	0/0:7,0:7:6.02:0,6,304	0/0:37,0:16:15.05:0,15,527	0/0:58,0:27:22.22:0,22,348	0/0:17,0:17:15.05:0,15,975	0/0:21,0:23:37.84:0,38,1934	0/0:27,0:25:36.12:0,36,1546	0/0:19,0:18:23.75:0,24,850	0/0:15,0:14:33.57:0,34,2158	0/0:27,0:29:55.73:0,56,2725	0/0:14,0:13:15.05:0,15,1032	0/0:20,0:20:33.11:0,33,1915	0/0:17,0:17:30.10:0,30,1852	0/0:19,0:20:41.16:0,41,2224	0/0:11,0:15:15.05:0,15,530	0/0:10,0:12:23.91:0,24,1564	0/0:13,0:13:15.05:0,15,870	0/0:11,0:17:33.07:0,33,1998	0/0:15,0:13:23.74:0,24,781	0/0:7,0:8:13.60:0,14,651	0/0:27,0:26:24.05:0,24,1071	0/0:17,0:17:22.28:0,22,656	0/0:8,0:8:15.04:0,15,759	0/0:33,0:35:72.23:0,72,4435	0/0:18,0:18:21.07:0,21,1481	0/0:20,0:20:24.08:0,24,1131	0/0:15,0:14:23.90:0,24,1292	0/0:16,0:13:14.96:0,15,317
chr10	73207676	.	G	GT	436.08	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.846;DP=665;FS=0.905;HRun=9;HaplotypeScore=63.2908;InbreedingCoeff=0.9827;MQ=69.49;MQ0=1;MQRankSum=-1.866;QD=16.77;ReadPosRankSum=-0.608;VQSLOD=3.5719;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:26:48.13:531,48,0	0/0:8,0:8:17.99:0,18,156	0/0:21,0:16:21.08:0,21,231	0/0:17,0:16:20.22:0,20,152	0/0:23,0:23:44.97:0,45,391	0/0:26,0:26:71.96:0,72,625	0/0:18,0:18:53.96:0,54,460	0/0:39,0:38:90.39:0,90,778	0/0:30,0:30:77.96:0,78,677	0/0:36,0:36:89.93:0,90,778	0/0:22,0:22:59.99:0,60,521	0/0:24,0:24:68.99:0,69,599	0/0:25,0:25:65.96:0,66,569	0/0:18,0:18:50.98:0,51,440	0/0:30,0:30:77.95:0,78,674	0/0:20,0:20:53.97:0,54,465	0/0:20,0:20:50.99:0,51,442	0/0:29,0:29:54.24:0,54,604	0/0:23,0:23:59.94:0,60,512	0/0:19,0:19:50.97:0,51,438	0/0:16,0:16:32.94:0,33,282	0/0:33,0:33:86.98:0,87,755	0/0:21,0:21:50.97:0,51,438	0/0:26,0:26:68.97:0,69,599	0/0:25,0:25:71.96:0,72,619	0/0:24,0:24:59.98:0,60,521	0/0:30,0:29:68.97:0,69,599	0/0:14,0:14:32.99:0,33,286
chr10	73207853	.	TCAC	T	4676.44	PASS	AB=0.511;AC=9;AF=0.161;AN=56;BaseQRankSum=11.828;DP=631;FS=3.608;HRun=0;HaplotypeScore=91.1196;InbreedingCoeff=0.8868;MQ=73.48;MQ0=0;MQRankSum=-4.099;QD=39.63;ReadPosRankSum=1.619;VQSLOD=5.4782;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,153,3321	0/0:10,0:10:30.10:0,30,676	0/0:15,0:15:39.13:0,39,784	0/0:28,0:28:64.82:0,65,1236	0/0:14,0:14:39.13:0,39,876	0/0:20,0:20:51.18:0,51,1147	0/0:20,0:20:60.21:0,60,1353	0/0:22,0:22:60.18:0,60,1276	0/0:21,0:21:63.22:0,63,1427	0/0:23,0:23:69.20:0,69,1437	0/0:17,0:17:51.17:0,51,1111	0/1:1,23:24:7.79:887,0,8	1/1:2,23:25:60.15:997,60,0	0/0:20,0:20:54.19:0,54,1216	0/0:28,0:28:84.27:0,84,1860	0/0:17,0:17:51.18:0,51,1137	0/0:30,0:30:87.27:0,87,1839	0/0:32,0:32:96.28:0,96,2124	0/0:17,0:16:51.14:0,51,1024	0/0:21,0:21:54.19:0,54,1222	0/0:39,0:39:99:0,114,2503	1/1:1,26:27:66.23:1097,66,0	1/1:1,24:25:66.23:1096,66,0	1/1:0,17:17:36.12:598,36,0	0/0:20,0:20:54.17:0,54,1165	0/0:21,0:21:63.22:0,63,1390	0/0:20,0:20:54.17:0,54,1154	0/0:7,0:7:21.02:0,21,343
chr10	73208690	.	CCA	C	2633.59	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=11.231;DP=728;FS=12.398;HRun=0;HaplotypeScore=91.1136;InbreedingCoeff=0.9993;MQ=78.26;MQ0=0;MQRankSum=-4.427;QD=38.17;ReadPosRankSum=0.939;VQSLOD=5.2845;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,66:69:99:2728,187,0	0/0:15,0:15:39.12:0,39,685	0/0:18,0:18:45.06:0,45,679	0/0:17,0:17:45.15:0,45,752	0/0:23,0:23:66.20:0,66,1159	0/0:18,0:18:51.17:0,51,932	0/0:31,0:31:90.27:0,90,1607	0/0:27,0:27:78.25:0,78,1383	0/0:23,0:23:69.24:0,69,1281	0/0:26,0:26:72.24:0,72,1320	0/0:19,0:19:54.19:0,54,1009	0/0:30,0:30:90.29:0,90,1613	0/0:23,0:23:69.22:0,69,1252	0/0:23,0:23:69.22:0,69,1248	0/0:27,0:27:78.25:0,78,1411	0/0:28,0:28:84.25:0,84,1507	0/0:46,0:46:99:0,138,2482	0/0:23,0:23:69.21:0,69,1256	0/0:19,0:19:57.19:0,57,1029	0/0:11,0:11:30.09:0,30,520	0/0:44,0:44:99:0,126,2244	0/0:28,0:28:84.29:0,84,1572	0/0:25,0:25:72.20:0,72,1239	0/0:29,0:29:81.28:0,81,1496	0/0:26,0:26:75.26:0,75,1380	0/0:27,0:27:81.26:0,81,1486	0/0:20,0:20:60.19:0,60,1073	0/0:13,0:13:39.13:0,39,730
chr10	73209686	.	A	AC	1908.51	PASS	AB=0.556;AC=17;AF=0.304;AN=56;BaseQRankSum=1.424;DP=556;FS=2.161;HRun=8;HaplotypeScore=70.5421;InbreedingCoeff=0.8216;MQ=68.61;MQ0=0;MQRankSum=-0.673;QD=15.52;ReadPosRankSum=-1.636;VQSLOD=3.5439;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:39:55.18:0,55,162	0/0:6,0:6:18.01:0,18,165	0/0:14,0:13:23.41:0,23,229	0/0:11,0:11:21:0,21,192	0/0:15,0:15:32.99:0,33,297	0/0:16,0:16:39.02:0,39,357	0/0:25,0:25:60.03:0,60,549	0/0:38,0:38:90.01:0,90,814	0/0:15,0:15:39.02:0,39,357	1/1:0,23:23:66.15:731,66,0	0/1:1,4:5:15.44:90,0,15	1/1:7,0:11:8.99:52,9,0	1/1:6,0:13:2.84:14,3,0	0/0:20,0:20:54.03:0,54,493	0/0:30,0:30:75.03:0,75,686	0/0:16,0:16:48.03:0,48,439	0/0:41,0:43:99:0,112,992	1/1:2,21:23:57.17:657,57,0	0/0:17,0:17:48:0,48,432	0/0:19,0:19:54.02:0,54,494	0/0:50,0:50:99:0,138,1251	1/1:6,0:7:8.80:59,9,0	1/1:4,0:4:5.96:45,6,0	1/1:11,0:17:14.24:72,14,0	1/1:3,17:20:33.10:381,33,0	0/0:28,0:28:72.02:0,72,658	0/0:17,1:18:4.28:0,4,294	0/0:13,0:13:36.02:0,36,329
chr10	73209841	.	CTTT	C	997.64	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.817;DP=462;FS=8.890;HRun=13;HaplotypeScore=67.9481;InbreedingCoeff=0.8977;MQ=60.12;MQ0=6;MQRankSum=-0.203;QD=21.69;ReadPosRankSum=3.702;VQSLOD=2.0181;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:87.06:0,87,1131	0/0:10,0:10:30.10:0,30,577	0/0:4,0:4:0:0,0,0	0/0:5,0:5:2.99:0,3,24	0/0:30,0:32:79.28:0,79,1201	0/0:22,0:22:57.15:0,57,1055	0/0:12,0:12:27.05:0,27,481	0/0:46,0:45:99:0,103,1727	0/0:10,0:10:18.06:0,18,314	0/0:18,0:20:45.11:0,45,779	0/0:17,0:17:40.84:0,41,621	1/1:2,3:5:9:109,9,0	1/1:1,12:13:27.07:327,27,0	0/0:8,0:8:21.01:0,21,275	0/0:17,0:17:27.07:0,27,467	0/0:7,0:6:15.02:0,15,249	0/0:31,0:34:84.21:0,84,1478	0/0:17,0:19:39.60:0,40,736	0/0:14,0:13:30.10:0,30,546	0/0:14,0:14:30.06:0,30,511	0/0:15,0:15:33.07:0,33,597	1/1:4,4:8:12.01:146,12,0	1/1:1,8:9:24.07:290,24,0	1/1:2,9:11:24.06:292,24,0	0/0:19,0:21:45.13:0,45,828	0/0:22,0:23:52.05:0,52,919	0/0:8,0:8:21.02:0,21,334	0/0:14,0:16:42.13:0,42,746
chr10	73210094	.	G	GTGTTGT	2623.95	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-1.622;DP=596;FS=13.811;HRun=0;HaplotypeScore=123.0799;InbreedingCoeff=0.9685;MQ=72.12;MQ0=2;MQRankSum=-9.302;QD=34.53;ReadPosRankSum=-2.626;VQSLOD=2.1349;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,99,2088	0/0:3,0:3:9.03:0,9,172	0/0:28,0:25:44.51:0,45,848	0/0:23,0:22:20.31:0,20,391	0/0:15,0:15:42.14:0,42,882	0/0:22,0:22:48.16:0,48,986	0/0:18,0:18:39.12:0,39,757	0/0:25,0:25:33.10:0,33,658	0/0:18,0:18:42.11:0,42,816	0/0:18,0:18:48.13:0,48,958	0/0:15,0:15:33.11:0,33,703	1/1:13,5:16:18.06:551,18,0	1/1:10,7:14:15.05:498,15,0	0/0:14,0:14:27.09:0,27,571	0/0:28,0:28:60.19:0,60,1199	0/0:30,0:30:78.27:0,78,1644	0/0:30,0:29:69.19:0,69,1388	0/0:25,0:25:57.18:0,57,1169	0/0:23,0:22:42.10:0,42,788	0/0:27,0:27:63.20:0,63,1285	0/0:36,0:36:72.20:0,72,1476	1/1:4,4:8:18.06:409,18,0	1/1:2,5:7:18.06:520,18,0	1/1:11,14:23:27.56:817,28,0	0/0:17,0:17:42.14:0,42,895	0/0:29,0:29:69.21:0,69,1393	0/0:33,0:32:81.20:0,81,1641	0/0:4,0:4:12.04:0,12,256
chr10	73210674	.	CAGCAA	C	1047.55	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=9.864;DP=479;FS=3.090;HRun=0;HaplotypeScore=96.6712;InbreedingCoeff=0.6907;MQ=76.85;MQ0=5;MQRankSum=-2.963;QD=11.64;ReadPosRankSum=2.629;VQSLOD=2.7581;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:66.49:0,66,890	0/0:9,0:9:27.04:0,27,483	0/0:30,0:15:15.66:0,16,447	0/0:15,0:10:27.56:0,28,419	0/0:20,0:20:60.14:0,60,1089	0/0:11,0:11:32.98:0,33,532	0/0:16,0:16:36.12:0,36,745	0/0:22,0:22:57.17:0,57,981	0/0:19,0:18:54.17:0,54,980	0/0:20,0:20:60.20:0,60,1192	0/0:17,0:17:45.13:0,45,774	1/1:16,1:19:0.75:250,1,0	1/1:15,0:15:11.94:189,12,0	0/0:13,0:13:36.11:0,36,741	0/0:13,0:13:36.10:0,36,667	0/0:11,0:11:30.10:0,30,550	0/0:19,0:19:54.14:0,54,1003	0/0:3,0:3:3.01:0,3,44	0/0:18,0:18:54.17:0,54,1040	0/0:19,0:19:48.08:0,48,919	0/0:9,0:9:21.02:0,21,270	0/1:23,0:23:11.07:226,0,11	1/1:16,2:18:1.63:297,2,0	1/1:14,1:15:21.11:226,21,0	0/0:16,0:16:48.14:0,48,875	0/0:20,0:20:57.14:0,57,909	0/0:23,0:23:48.97:0,49,951	0/0:14,0:14:39.17:0,39,628
chr10	73210675	.	AGC	A	365.92	PASS	AB=0.986;AC=12;AF=0.214;AN=56;BaseQRankSum=10.631;DP=481;FS=24.743;HRun=0;HaplotypeScore=71.5478;InbreedingCoeff=0.6277;MQ=75.82;MQ0=5;MQRankSum=-2.538;QD=2.75;ReadPosRankSum=0.000;VQSLOD=-0.2422;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,1:34:31.98:32,0,78	0/0:9,0:9:24.03:0,24,339	0/0:31,0:14:21.04:0,21,369	0/0:15,0:10:27.09:0,27,384	0/0:20,0:20:53.77:0,54,753	0/1:12,0:12:4.21:4,0,315	0/0:16,0:16:36.07:0,36,525	0/0:23,0:23:56.82:0,57,827	0/0:21,0:20:27.57:0,28,744	0/0:20,0:20:60.20:0,60,877	0/0:16,0:16:31.89:0,32,571	1/1:19,0:19:2.88:131,3,0	1/1:14,1:15:23.02:86,23,0	0/0:12,0:12:36.12:0,36,526	0/0:12,0:12:17.21:0,17,472	0/0:12,0:12:33.11:0,33,476	0/0:21,0:21:19.61:0,20,626	0/0:3,0:3:3.01:0,3,44	0/0:18,0:18:54.17:0,54,771	0/0:17,1:18:41.86:0,42,582	0/0:9,0:9:5.27:0,5,250	1/1:21,0:21:4.18:76,4,0	1/1:17,0:17:2.19:117,2,0	1/1:15,0:15:15.46:73,15,0	0/0:16,0:16:34.79:0,35,617	0/0:20,0:20:53.98:0,54,766	0/0:21,1:22:44.74:0,45,635	0/0:14,0:14:34.89:0,35,473
chr10	73210676	.	GCAAAA	G	2441.21	PASS	AB=0.905;AC=11;AF=0.196;AN=56;BaseQRankSum=5.000;DP=510;FS=2.112;HRun=0;HaplotypeScore=96.0090;InbreedingCoeff=0.8569;MQ=74.78;MQ0=5;MQRankSum=-2.275;QD=19.69;ReadPosRankSum=2.729;VQSLOD=3.5388;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:38:70.99:71,0,925	0/0:11,0:11:33.05:0,33,620	0/0:31,0:14:14.93:0,15,357	0/0:16,0:10:27.35:0,27,254	0/0:23,0:23:69.13:0,69,1275	0/0:13,0:14:42.10:0,42,780	0/0:19,0:19:48.07:0,48,1001	0/0:22,0:22:63.14:0,63,1077	0/0:21,0:20:60.07:0,60,1034	0/0:19,0:19:57.14:0,57,1025	0/0:16,0:16:44.97:0,45,662	1/1:15,3:18:48.90:553,49,0	1/1:11,3:15:33.34:457,33,0	0/0:17,0:17:51.12:0,51,1055	0/0:14,0:18:45.04:0,45,796	0/0:12,0:12:33.03:0,33,573	0/0:25,0:25:72.15:0,72,1444	0/0:3,0:3:5.95:0,6,44	0/0:19,0:19:57.15:0,57,1145	0/0:18,0:18:50.99:0,51,1059	0/0:8,0:8:21:0,21,223	1/1:14,3:20:15.06:583,15,0	1/1:9,5:16:21.72:519,22,0	1/1:12,4:16:32.45:436,32,0	0/0:15,0:15:45:0,45,734	0/0:18,0:18:50.79:0,51,870	0/0:25,0:25:59.30:0,59,1183	0/0:14,0:14:42:0,42,648
chr10	73210732	.	TG	T	2612.03	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.514;DP=552;FS=3.487;HRun=3;HaplotypeScore=64.3688;InbreedingCoeff=0.9977;MQ=96.85;MQ0=0;MQRankSum=-1.302;QD=29.35;ReadPosRankSum=1.264;VQSLOD=3.1114;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1583	0/0:14,0:14:39.12:0,39,543	0/0:29,0:28:79.50:0,80,1109	0/0:28,0:28:75.25:0,75,1066	0/0:29,0:29:87.27:0,87,1214	0/0:14,0:14:42.14:0,42,605	0/0:29,0:29:87.28:0,87,1233	0/0:32,0:32:96.31:0,96,1351	0/0:16,0:16:48.16:0,48,691	0/0:14,0:14:42.14:0,42,604	0/0:10,0:10:27.08:0,27,371	1/1:0,22:22:60.19:744,60,0	1/1:1,14:15:39.12:483,39,0	0/0:15,0:15:45.13:0,45,613	0/0:19,0:19:54.18:0,54,777	0/0:20,0:20:60.15:0,60,793	0/0:32,0:32:93.29:0,93,1303	0/0:12,0:12:33.03:0,33,409	0/0:14,0:14:42.14:0,42,604	0/0:21,0:21:57.19:0,57,820	0/0:24,0:24:72.23:0,72,1018	1/1:3,14:17:39.12:483,39,0	1/1:0,13:13:39.12:483,39,0	1/1:0,22:22:48.15:595,48,0	0/0:12,0:12:36.12:0,36,518	0/0:18,0:18:54.18:0,54,778	0/0:16,0:16:48.16:0,48,689	0/0:6,0:6:18.06:0,18,259
chr10	73211914	.	ATGTGTGTG	A	579.20	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=5.126;DP=521;FS=4.153;HRun=0;HaplotypeScore=130.8992;InbreedingCoeff=0.7320;MQ=56.71;MQ0=15;MQRankSum=-4.856;QD=9.05;ReadPosRankSum=-0.408;VQSLOD=2.2898;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:44:66.20:0,66,1866	0/0:3,0:4:9.03:0,9,240	./.	0/0:34,0:16:0.89:0,1,2	0/0:12,0:12:18.05:0,18,438	0/0:17,0:19:27.09:0,27,877	0/0:18,0:18:27.39:0,27,808	0/0:27,0:27:12.92:0,13,230	0/0:15,0:15:29.94:0,30,948	0/0:16,0:20:7.34:0,7,216	0/0:6,0:9:11.99:0,12,116	1/1:10,8:19:15.05:337,15,0	1/1:14,4:18:11.95:190,12,0	0/0:12,0:12:24.08:0,24,853	0/0:10,0:10:18.06:0,18,675	0/0:16,0:16:20.28:0,20,686	0/0:23,0:31:51.18:0,51,1615	0/0:7,0:10:12:0,12,306	0/0:24,0:22:13.76:0,14,492	0/0:12,0:12:17.80:0,18,629	0/0:34,0:33:48.62:0,49,1454	1/1:5,1:6:3.01:38,3,0	0/0:7,1:8:0.47:0,0,1	1/1:17,4:21:6.02:150,6,0	0/0:11,0:14:6.15:0,6,130	0/0:28,0:29:30.10:0,30,853	0/0:17,0:18:30.09:0,30,892	0/0:6,0:6:6.02:0,6,187
chr10	73212119	.	G	GT	1285.30	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-0.429;DP=438;FS=1.939;HRun=9;HaplotypeScore=47.4477;InbreedingCoeff=0.9486;MQ=67.87;MQ0=3;MQRankSum=-3.693;QD=21.07;ReadPosRankSum=-0.013;VQSLOD=4.0771;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:37.66:0,38,345	0/0:9,0:9:20.98:0,21,182	0/0:18,0:14:11.86:0,12,175	0/0:9,0:5:8.92:0,9,65	0/0:18,0:18:41.96:0,42,360	0/0:15,0:16:44.02:0,44,371	0/0:8,0:8:17.99:0,18,156	0/0:32,0:31:71.90:0,72,610	0/0:11,0:10:26.98:0,27,231	0/0:31,0:30:71.98:0,72,625	0/0:17,1:18:11.81:0,12,331	1/1:2,11:12:24.06:264,24,0	1/1:2,14:16:36.10:396,36,0	0/0:7,0:7:14.98:0,15,130	0/0:12,0:12:32.92:0,33,276	0/0:13,0:13:29.98:0,30,260	0/0:22,0:22:59.95:0,60,513	0/0:17,0:17:32.01:0,32,365	0/0:19,0:19:44.68:0,45,389	0/0:12,0:12:23.98:0,24,208	0/0:12,0:12:20.98:0,21,182	1/1:1,4:5:9.02:100,9,0	1/1:3,10:13:30.08:332,30,0	1/1:0,14:14:33.09:364,33,0	0/0:19,0:19:44.97:0,45,388	0/0:25,0:24:68.97:0,69,596	0/0:24,0:24:65.01:0,65,553	0/0:8,0:8:24:0,24,208
chr10	73212679	.	TAAAAAA	T	2683.78	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.366;DP=536;FS=0.000;HRun=16;HaplotypeScore=124.4884;InbreedingCoeff=0.9691;MQ=65.86;MQ0=4;MQRankSum=-9.012;QD=26.31;ReadPosRankSum=5.775;VQSLOD=1.2630;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:34:79.43:0,79,719	0/0:7,0:7:21.07:0,21,672	0/0:32,0:10:14.22:0,14,185	0/0:18,0:8:15.50:0,16,180	0/0:19,0:25:66.17:0,66,1639	0/0:16,0:20:51.18:0,51,1430	0/0:10,0:13:36.12:0,36,1033	0/0:29,0:30:57.16:0,57,1378	0/0:6,0:8:21.07:0,21,616	0/0:6,0:30:48.03:0,48,206	0/0:6,0:17:31.35:0,31,142	1/1:1,18:20:39.07:679,39,0	1/1:5,13:19:39.02:683,39,0	0/0:4,0:5:15.05:0,15,424	0/0:19,0:20:51.15:0,51,1319	0/0:14,0:16:39.13:0,39,1123	0/0:25,0:26:65.25:0,65,1747	1/1:3,1:22:41.45:268,41,0	0/0:23,0:22:45.15:0,45,1235	0/0:16,0:17:45.15:0,45,1142	0/0:7,0:7:12:0,12,224	1/1:0,4:4:12.04:216,12,0	1/1:7,19:26:42.51:806,43,0	1/1:3,8:11:11.93:216,12,0	0/0:8,0:19:27.69:0,28,162	0/0:18,0:25:57.19:0,57,1442	0/0:25,0:28:75.26:0,75,2133	0/0:10,0:13:29.13:0,29,751
chr10	73215411	.	GTC	G	1570.10	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.216;DP=684;FS=6.647;HRun=0;HaplotypeScore=94.1772;InbreedingCoeff=0.9707;MQ=77.61;MQ0=0;MQRankSum=-1.449;QD=26.17;ReadPosRankSum=3.303;VQSLOD=4.9192;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,52:60:99:1665,132,0	0/0:13,0:13:30.10:0,30,494	0/0:29,0:24:42.27:0,42,604	0/0:35,1:34:63.21:0,63,997	0/0:25,0:25:60.20:0,60,989	0/0:28,0:28:69.22:0,69,1118	0/0:24,0:24:57.17:0,57,894	0/0:25,0:25:51.15:0,51,780	0/0:16,0:16:39.12:0,39,618	0/0:23,0:23:51.17:0,51,843	0/0:13,0:13:33.11:0,33,549	0/0:17,0:17:50.53:0,51,785	0/0:20,1:21:13.36:0,13,758	0/0:27,0:27:70.08:0,70,1064	0/0:19,0:19:48.15:0,48,773	0/0:17,0:17:48.16:0,48,792	0/0:35,0:35:90.24:0,90,1443	0/0:25,0:25:60.20:0,60,986	0/0:20,0:20:45.15:0,45,744	0/0:14,0:14:39.13:0,39,637	0/0:42,0:42:99:0,114,1805	0/0:14,0:14:33.11:0,33,545	0/0:19,0:19:51.17:0,51,845	0/0:21,1:22:19.34:0,19,860	0/0:22,0:22:60.18:0,60,969	0/0:33,0:33:78.25:0,78,1270	0/0:27,0:27:66.23:0,66,1093	0/0:18,0:18:45.12:0,45,684
chr10	73216054	.	C	CT	3416.95	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-14.014;DP=608;FS=4.100;HRun=1;HaplotypeScore=56.1721;InbreedingCoeff=0.9799;MQ=95.89;MQ0=0;MQRankSum=-3.739;QD=42.71;ReadPosRankSum=2.338;VQSLOD=4.0055;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,46:46:99:1933,129,0	0/0:6,0:6:18.06:0,18,234	0/0:28,0:28:83.90:0,84,963	0/0:29,0:29:80.71:0,81,991	0/0:18,0:18:51.15:0,51,645	0/0:11,0:11:30.10:0,30,389	0/0:29,0:29:87.27:0,87,1115	0/0:34,0:34:99:0,99,1273	0/0:24,0:24:72.23:0,72,935	0/0:30,0:30:87.26:0,87,1086	0/0:21,0:21:63.20:0,63,816	0/0:18,0:18:54.18:0,54,699	0/0:12,0:12:36.10:0,36,448	0/0:12,0:12:36.10:0,36,451	0/0:23,0:23:69.17:0,69,862	0/0:12,0:12:36.12:0,36,467	0/0:28,0:28:84.26:0,84,1075	1/1:0,34:34:99:1484,99,0	0/0:20,0:20:57.17:0,57,726	0/0:16,0:16:45.11:0,45,554	0/0:31,0:31:87.25:0,87,1099	0/0:18,0:18:48.16:0,48,623	0/0:20,0:20:54.17:0,54,700	0/0:22,0:22:63.20:0,63,817	0/0:15,0:14:42.14:0,42,545	0/0:23,0:23:69.21:0,69,870	0/0:24,0:24:72.23:0,72,935	0/0:4,0:4:12.04:0,12,156
chr10	73216889	.	CTCTT	C	2075.96	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=2.224;DP=536;FS=0.000;HRun=0;HaplotypeScore=72.7553;InbreedingCoeff=0.9533;MQ=54.16;MQ0=14;MQRankSum=1.158;QD=15.15;ReadPosRankSum=2.607;VQSLOD=2.6987;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:25:56.15:480,56,0	0/0:8,0:8:23.93:0,24,191	0/0:68,0:18:36.87:0,37,360	0/0:67,0:17:29.99:0,30,215	0/0:21,0:21:50.30:0,50,495	0/0:13,0:13:37.26:0,37,476	0/0:25,0:25:32.70:0,33,624	0/0:32,0:32:67.20:0,67,638	0/0:13,0:13:30.37:0,30,279	1/1:1,0:8:20.99:181,21,0	1/1:3,1:14:25.63:201,26,0	1/1:10,0:10:20.30:188,20,0	1/1:5,0:5:6:53,6,0	0/0:12,0:11:27.88:0,28,336	0/0:24,0:24:46.84:0,47,493	0/0:21,0:20:37.22:0,37,464	0/0:14,0:13:32.88:0,33,346	1/1:21,0:20:47.34:389,47,0	0/0:14,0:14:21.33:0,21,256	0/0:15,0:15:35.28:0,35,282	0/0:13,0:13:32.78:0,33,248	1/1:13,0:14:35.54:339,36,0	1/1:15,0:14:26.25:229,26,0	1/1:2,11:13:3.01:50,3,0	1/1:12,0:12:20.35:180,20,0	0/0:18,0:17:29.83:0,30,281	0/0:14,0:14:35.51:0,36,256	0/0:7,0:7:20.54:0,21,141
chr10	73217682	.	TC	T	7512.61	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=18.493;DP=622;FS=0.000;HRun=3;HaplotypeScore=78.5057;InbreedingCoeff=0.9689;MQ=88.53;MQ0=0;MQRankSum=-3.657;QD=33.99;ReadPosRankSum=3.509;VQSLOD=5.3607;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,37:38:99:1264,102,0	0/0:11,0:11:30.07:0,30,409	0/0:17,0:17:48.15:0,48,653	0/0:28,0:28:75.25:0,75,1053	0/0:16,0:16:48.15:0,48,672	0/0:21,0:21:57.19:0,57,820	0/0:24,0:24:69.16:0,69,935	0/0:27,0:27:81.27:0,81,1166	0/0:13,0:13:39.13:0,39,561	1/1:0,23:23:69.13:809,69,0	1/1:0,8:8:21.07:260,21,0	1/1:0,30:30:84.26:1030,84,0	1/1:0,16:16:48.15:594,48,0	0/0:27,0:27:81.27:0,81,1165	0/0:29,0:29:87.25:0,87,1212	0/0:22,0:22:66.17:0,66,879	0/0:29,0:29:87.26:0,87,1216	1/1:0,23:23:69.22:855,69,0	0/0:18,0:18:45.11:0,45,609	0/0:12,0:12:33.10:0,33,457	0/0:57,0:57:99:0,162,2217	1/1:0,23:23:69.22:851,69,0	1/1:0,9:9:24.08:296,24,0	1/1:0,32:32:87.27:1070,87,0	1/1:0,19:19:39.12:483,39,0	0/0:12,1:13:1.94:0,2,465	0/0:18,0:18:48.16:0,48,691	0/0:19,0:19:57.19:0,57,818
chr10	73218102	.	G	GACAC	1065.61	PASS	AB=0.786;AC=15;AF=0.278;AN=54;BaseQRankSum=7.665;DP=541;FS=1.587;HRun=0;HaplotypeScore=112.2643;InbreedingCoeff=0.7184;MQ=62.85;MQ0=5;MQRankSum=-2.149;QD=9.35;ReadPosRankSum=-1.107;VQSLOD=2.9986;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,3:25:10.64:107,11,0	0/0:11,0:11:20.42:0,20,319	0/0:37,0:21:0.33:0,0,411	0/0:28,0:15:23.91:0,24,340	0/0:15,0:14:14.20:0,14,461	0/0:29,0:29:54.12:0,54,793	0/0:29,0:29:44.96:0,45,716	0/0:37,0:37:75.08:0,75,1191	0/0:18,0:19:37.43:0,37,628	0/1:8,3:11:32.33:282,0,32	1/1:7,10:16:6.02:147,6,0	1/1:7,5:13:12.04:220,12,0	1/1:7,1:7:6.02:103,6,0	0/0:20,0:20:38.67:0,39,629	0/0:23,0:23:60.19:0,60,965	0/0:13,0:13:28.29:0,28,379	0/0:24,0:24:45.67:0,46,864	1/1:5,0:15:12.04:198,12,0	0/0:18,0:18:35.61:0,36,560	0/0:10,0:10:18.05:0,18,276	0/0:35,0:35:69.35:0,69,1149	1/1:8,2:10:6.02:105,6,0	./.	1/1:6,7:13:3.01:74,3,0	0/0:7,10:17:2.93:0,3,47	0/0:28,0:28:72.16:0,72,1160	0/0:12,0:12:30.10:0,30,496	0/0:8,0:8:24.03:0,24,371
chr10	73218119	.	ATG	A	1364.96	PASS	AB=0.916;AC=18;AF=0.333;AN=54;BaseQRankSum=8.726;DP=513;FS=57.410;HRun=0;HaplotypeScore=84.7182;InbreedingCoeff=0.2704;MQ=55.37;MQ0=22;MQRankSum=-0.519;QD=6.66;ReadPosRankSum=-5.510;VQSLOD=-0.7368;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,4:23:10.47:214,10,0	0/1:9,0:9:41.66:42,0,335	0/0:35,0:12:9.36:0,9,460	0/0:27,0:9:24.04:0,24,441	0/1:18,1:18:49.10:49,0,460	0/0:26,0:26:25.16:0,25,993	0/0:19,0:19:48.10:0,48,867	0/0:27,1:28:46.85:0,47,1405	0/1:17,0:16:21.19:21,0,616	0/1:6,10:15:65.16:241,0,65	0/1:14,1:13:14.88:18,0,15	1/1:11,1:12:18.06:251,18,0	1/1:11,0:8:13.59:250,14,0	0/0:18,0:17:28.01:0,28,703	0/0:24,0:23:35.09:0,35,1127	0/0:10,0:10:3.08:0,3,470	0/0:26,0:25:71.78:0,72,1122	1/1:10,1:11:2.61:99,3,0	0/0:20,0:20:12.66:0,13,874	0/0:10,0:9:18.05:0,18,289	0/1:35,0:35:83.60:84,0,1208	1/1:7,3:11:15.05:211,15,0	./.	0/1:9,0:9:0.90:40,0,1	0/0:13,2:14:2.90:0,3,50	0/0:27,0:26:73.46:0,73,1317	0/0:17,0:16:9.75:0,10,554	0/1:11,3:13:20.17:20,0,394
chr10	73218132	.	C	CAG	85	PASS	AB=0.940;AC=8;AF=0.154;AN=52;BaseQRankSum=-1.221;DP=486;FS=4.491;HRun=0;HaplotypeScore=94.0624;InbreedingCoeff=0.2870;MQ=49.78;MQ0=23;MQRankSum=0.240;QD=0.89;ReadPosRankSum=-0.120;VQSLOD=1.3242;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:16:5.68:0,6,28	0/0:8,0:8:11.81:0,12,84	./.	./.	0/0:15,0:15:20.71:0,21,183	0/0:24,0:24:15.27:0,15,115	0/0:18,0:18:5.54:0,6,42	1/1:24,0:23:1.25:3,1,0	1/1:17,0:16:9.03:126,9,0	0/0:14,0:13:9.16:0,9,60	0/1:14,0:12:0.03:0,0,0	0/0:10,0:10:11.96:0,12,94	0/0:12,0:9:10.63:0,11,99	0/1:11,5:14:1.95:39,0,2	0/0:29,0:28:5.85:0,6,205	0/0:13,0:13:12.47:0,12,113	0/0:26,0:26:26.80:0,27,233	0/0:10,0:10:11.55:0,12,75	0/0:20,0:20:15.01:0,15,143	0/0:9,0:9:5.63:0,6,44	0/0:36,0:37:35.37:0,35,274	0/1:11,0:11:14.31:14,0,29	0/0:8,0:8:2.80:0,3,13	0/0:7,0:7:2.98:0,3,22	0/0:17,0:16:2.99:0,3,24	0/0:27,0:27:24.25:0,24,220	0/1:14,0:13:15.33:15,0,59	0/0:18,0:17:16.78:0,17,141
chr10	73218173	.	AGAG	A	54.81	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.723;DP=543;FS=0.000;HRun=0;HaplotypeScore=89.0035;InbreedingCoeff=0.7542;MQ=63.17;MQ0=25;MQRankSum=0.205;QD=3.04;ReadPosRankSum=1.838;VQSLOD=1.2842;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,12:14:9.03:138,9,0	0/0:10,0:10:29.13:0,29,367	0/0:34,0:13:38.14:0,38,469	0/0:50,0:15:35.10:0,35,409	0/0:25,0:24:68.69:0,69,984	0/0:19,0:18:41.87:0,42,555	0/0:18,0:18:43.37:0,43,550	0/0:30,0:29:78.25:0,78,1020	0/0:15,0:15:33.11:0,33,506	0/0:19,0:19:38.28:0,38,558	0/0:7,0:6:11.76:0,12,158	0/0:14,0:14:32.95:0,33,438	0/0:11,0:10:21.03:0,21,402	0/0:14,0:12:18.06:0,18,276	0/0:20,0:20:47.92:0,48,833	0/0:19,0:19:45.62:0,46,713	0/0:27,0:27:55.47:0,55,907	0/0:7,0:7:5.95:0,6,134	0/0:19,0:18:51.17:0,51,817	0/0:20,0:19:54.16:0,54,750	0/0:32,0:31:63.97:0,64,1020	0/0:13,0:13:26.99:0,27,353	0/0:6,0:6:9.03:0,9,145	0/0:8,0:8:14.95:0,15,221	0/0:21,0:20:33.02:0,33,418	0/0:25,0:24:56.83:0,57,801	0/0:18,0:16:32.84:0,33,474	0/0:24,0:23:48.09:0,48,704
chr10	73218235	.	GT	G	1838.18	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=5.168;DP=508;FS=2.147;HRun=10;HaplotypeScore=71.7180;InbreedingCoeff=0.9551;MQ=68.71;MQ0=11;MQRankSum=-3.206;QD=16.71;ReadPosRankSum=3.517;VQSLOD=4.3226;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:40.10:0,40,331	0/0:10,0:10:21.06:0,21,232	0/0:51,0:24:44.11:0,44,383	0/0:40,1:16:21:0,21,204	0/0:28,0:28:66.13:0,66,699	0/0:17,0:17:17.29:0,17,340	0/0:16,0:16:36.10:0,36,397	0/0:19,0:19:51.14:0,51,563	0/0:13,0:13:27.06:0,27,290	1/1:3,19:22:56.95:490,57,0	1/1:0,12:12:32.99:284,33,0	1/1:1,8:9:23.99:207,24,0	1/1:1,3:4:2.99:26,3,0	0/0:12,0:12:23.63:0,24,232	0/0:13,0:13:33.07:0,33,349	0/0:18,0:18:48.07:0,48,504	0/0:28,0:28:75.19:0,75,815	1/1:0,11:11:32.99:286,33,0	0/0:15,0:15:35.89:0,36,354	0/0:20,0:20:51.14:0,51,562	0/0:16,2:19:10.35:0,10,320	1/1:1,10:11:20.99:182,21,0	1/1:1,10:11:29.99:260,30,0	1/1:2,11:13:11.50:103,12,0	1/1:7,10:17:23.95:208,24,0	0/0:17,0:17:39.11:0,39,431	0/0:18,0:18:42.11:0,42,458	0/0:14,0:14:39.06:0,39,410
chr10	73218252	.	TTG	T	420.01	PASS	AB=0.926;AC=17;AF=0.315;AN=54;BaseQRankSum=3.452;DP=532;FS=3.548;HRun=0;HaplotypeScore=95.1112;InbreedingCoeff=-0.3712;MQ=59.69;MQ0=20;MQRankSum=0.516;QD=1.47;ReadPosRankSum=1.597;VQSLOD=1.7070;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:14.88:0,15,125	0/1:9,0:10:10.60:11,0,162	./.	0/0:40,0:13:0:0,0,0	0/1:24,0:24:28.31:28,0,286	0/1:14,0:17:51.02:51,0,256	0/1:15,2:17:14.88:15,0,204	0/1:17,0:16:13.73:14,0,39	0/1:9,3:12:17.90:18,0,146	0/0:26,0:26:3.30:0,3,262	0/0:14,0:15:9.01:0,9,89	0/0:15,0:15:0:0,0,0	0/0:6,0:6:0.47:0,0,1	0/1:15,0:14:12.23:12,0,265	0/1:12,2:14:98.47:98,0,111	0/1:18,1:19:41.39:41,0,158	0/1:23,6:30:99:116,0,167	1/1:11,0:12:8.52:42,9,0	0/0:13,0:12:8.86:0,9,99	0/1:19,1:19:14.91:15,0,201	0/1:26,0:25:30.86:31,0,33	0/0:15,0:15:3:0,3,27	0/0:12,0:12:2.99:0,3,24	0/0:17,0:17:2.99:0,3,24	0/0:21,0:20:4.25:0,4,37	0/1:19,1:20:17.89:18,0,165	0/1:18,0:18:32.56:33,0,238	0/1:10,1:9:17.89:18,0,162
chr10	73218614	.	GA	G	2307.78	PASS	AB=0.875;AC=21;AF=0.375;AN=56;BaseQRankSum=14.021;DP=638;FS=3.223;HRun=15;HaplotypeScore=100.3472;InbreedingCoeff=0.8571;MQ=57.25;MQ0=3;MQRankSum=-0.195;QD=8.94;ReadPosRankSum=6.150;VQSLOD=3.0788;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:32:17.26:81,17,0	0/0:12,1:13:11.18:0,11,207	0/0:31,1:11:14.68:0,15,97	0/0:23,1:11:6.17:0,6,77	0/0:20,0:20:24.75:0,25,250	0/0:20,0:21:44.72:0,45,369	0/0:18,0:19:29.83:0,30,249	0/0:31,0:32:47.08:0,47,360	0/0:16,0:16:32.98:0,33,286	1/1:13,28:41:89.08:543,89,0	1/1:6,13:20:40.43:255,40,0	1/1:5,14:19:29.20:237,29,0	1/1:5,7:12:20.66:134,21,0	0/0:15,0:19:38.56:0,39,296	0/0:18,1:20:11.73:0,12,302	0/0:20,1:23:28.30:0,28,368	0/0:25,1:27:24.87:0,25,366	1/1:4,19:24:55.21:350,55,0	0/1:24,3:28:23.74:24,0,307	0/0:24,0:25:49.46:0,49,420	0/0:16,1:16:16.61:0,17,259	1/1:1,12:13:29.51:192,30,0	1/1:8,16:24:38.35:249,38,0	1/1:8,11:19:29.23:191,29,0	1/1:7,17:25:27.62:268,28,0	0/0:28,1:29:28.31:0,28,355	0/0:25,3:27:21.18:0,21,390	0/0:12,2:14:0.46:0,0,252
chr10	73220716	.	CAA	C	811.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.943;DP=600;FS=1.556;HRun=9;HaplotypeScore=101.5668;InbreedingCoeff=0.9788;MQ=72.70;MQ0=4;MQRankSum=-1.199;QD=23.88;ReadPosRankSum=1.022;VQSLOD=3.2185;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:34:78.22:907,78,0	0/0:5,0:5:15.05:0,15,246	0/0:31,0:18:30.45:0,30,407	0/0:32,0:18:28.59:0,29,440	0/0:35,0:35:99:0,105,1644	0/0:18,0:18:51.16:0,51,810	0/0:16,0:17:41.63:0,42,649	0/0:23,0:23:57.17:0,57,874	0/0:20,0:20:57.18:0,57,888	0/0:21,0:21:51.13:0,51,770	0/0:13,0:15:36.10:0,36,507	0/0:18,0:18:35.21:0,35,630	0/0:16,0:16:39.12:0,39,610	0/0:15,0:15:42.10:0,42,654	0/0:28,0:28:75.26:0,75,1231	0/0:16,0:16:45.15:0,45,737	0/0:36,0:36:99:0,102,1643	0/0:28,0:28:69.24:0,69,1121	0/0:16,0:15:39.13:0,39,640	0/0:16,0:16:42.13:0,42,662	0/0:15,0:14:39.12:0,39,603	0/0:20,0:20:42.14:0,42,676	0/0:20,0:20:42.14:0,42,689	0/0:32,0:32:73.80:0,74,1185	0/0:19,0:20:45.14:0,45,692	0/0:26,0:26:66.05:0,66,1019	0/0:20,0:20:54.18:0,54,883	0/0:7,0:7:21.07:0,21,343
chr10	73220734	.	C	CA	1245.86	PASS	AB=0.845;AC=20;AF=0.357;AN=56;BaseQRankSum=11.489;DP=627;FS=1.737;HRun=11;HaplotypeScore=96.1582;InbreedingCoeff=0.8252;MQ=66.70;MQ0=11;MQRankSum=1.514;QD=5.79;ReadPosRankSum=4.545;VQSLOD=1.9496;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:86.54:0,87,673	0/1:5,1:6:12.51:13,0,98	0/0:41,0:12:9.71:0,10,60	0/0:40,2:19:13.64:0,14,101	0/0:31,2:32:14.86:0,15,458	0/0:20,0:20:53.77:0,54,418	0/0:13,0:13:32.85:0,33,255	0/0:20,1:21:14.27:0,14,285	0/0:28,0:28:38.11:0,38,461	1/1:24,0:22:34.61:168,35,0	1/1:14,0:14:21.45:104,21,0	1/1:16,0:16:15.86:80,16,0	1/1:12,0:12:27.50:123,27,0	0/0:14,0:15:27.35:0,27,247	0/0:25,0:25:59.73:0,60,462	0/0:15,0:15:32.85:0,33,255	0/0:32,0:35:89.76:0,90,667	1/1:28,0:28:52.15:232,52,0	0/0:18,0:17:41.60:0,42,322	0/1:12,3:15:36.53:37,0,131	0/0:16,0:16:44.81:0,45,345	1/1:17,0:17:24.98:129,25,0	1/1:24,0:24:37.73:170,38,0	1/1:34,0:33:56.29:244,56,0	1/1:25,0:25:35.68:159,36,0	0/0:28,0:28:41.16:0,41,373	0/0:16,1:18:13.43:0,13,277	0/0:7,0:7:16.96:0,17,119
chr10	73220741	.	A	AAAC	7743.50	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-10.486;DP=636;FS=4.326;HRun=0;HaplotypeScore=98.4718;InbreedingCoeff=0.9403;MQ=68.16;MQ0=11;MQRankSum=-1.360;QD=38.33;ReadPosRankSum=4.234;VQSLOD=5.7658;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:6.07:0,6,474	0/0:6,0:6:17.80:0,18,248	0/0:47,0:16:11.44:0,11,254	0/0:43,0:18:22.74:0,23,245	0/0:31,0:30:89.71:0,90,1172	0/0:19,0:19:57.19:0,57,869	0/0:14,0:14:42.10:0,42,587	0/0:23,0:23:62.84:0,63,772	0/0:28,0:28:84.01:0,84,1126	1/1:4,21:24:70.40:1130,70,0	1/1:2,11:14:27.02:581,27,0	1/1:1,13:14:26.82:478,27,0	1/1:0,13:13:30.10:620,30,0	0/0:15,0:15:42.12:0,42,587	0/0:27,0:27:69.21:0,69,1010	0/0:12,0:12:36.11:0,36,546	0/0:35,0:35:99:0,105,1478	1/1:1,26:28:57.19:1177,57,0	0/0:21,0:19:51.12:0,51,725	0/0:13,0:13:29.45:0,29,366	0/0:15,0:15:45.14:0,45,683	1/1:0,18:18:45.05:736,45,0	1/1:0,23:24:47.89:933,48,0	1/1:2,32:37:59.19:1284,59,0	1/1:2,25:27:39.12:805,39,0	0/0:22,1:23:1.14:0,1,812	0/0:17,0:17:47.88:0,48,660	0/0:6,0:6:18.06:0,18,262
chr10	73221589	.	T	TAC	9083.33	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=19.875;DP=1152;FS=5.039;HRun=0;HaplotypeScore=248.1872;InbreedingCoeff=0.9994;MQ=54.23;MQ0=7;MQRankSum=-11.310;QD=27.36;ReadPosRankSum=-0.126;VQSLOD=4.6584;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,18:36:60.19:969,60,0	0/0:15,0:15:39.13:0,39,519	0/0:70,0:33:77.24:0,77,939	0/0:55,0:29:72.17:0,72,930	0/0:33,0:33:87.27:0,87,1142	0/0:32,0:32:87.29:0,87,1158	0/0:37,0:37:99:0,102,1307	0/0:50,0:50:99:0,129,1675	0/0:61,0:61:99:0,166,2179	1/1:20,15:36:95.13:1503,95,0	1/1:13,8:21:33.11:562,33,0	1/1:29,11:40:66.12:1063,66,0	1/1:29,19:49:99:1825,114,0	0/0:57,0:57:99:0,150,1949	0/0:60,0:60:99:0,159,2069	0/0:58,0:58:99:0,166,2181	0/0:38,0:38:84.30:0,84,1206	1/1:7,16:23:53.09:878,53,0	0/0:37,0:35:81.21:0,81,1056	0/0:38,0:38:99:0,105,1363	0/0:89,0:89:99:0,240,3090	1/1:21,7:28:23.96:368,24,0	1/1:11,8:19:27.97:464,28,0	1/1:26,26:49:41.98:655,42,0	1/1:18,9:28:54.12:797,54,0	0/0:40,0:40:99:0,114,1476	0/0:32,0:32:93.31:0,93,1237	0/0:16,0:18:29.74:0,30,541
chr10	73221592	.	ACACATAC	A	4790.30	PASS	AB=0.784;AC=11;AF=0.196;AN=56;BaseQRankSum=14.782;DP=1170;FS=7.628;HRun=0;HaplotypeScore=357.7302;InbreedingCoeff=-0.2061;MQ=54.49;MQ0=8;MQRankSum=-11.721;QD=13.53;ReadPosRankSum=-3.653;VQSLOD=2.1792;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,7:34:6.32:480,0,6	0/0:17,0:17:45.15:0,45,1591	0/0:73,0:34:73.82:0,74,2351	0/0:60,0:30:84.22:0,84,2594	0/0:32,0:32:90.31:0,90,3326	0/0:32,0:32:87.30:0,87,3193	0/0:36,0:36:99:0,102,3500	0/0:50,0:50:99:0,141,4732	0/0:62,0:62:99:0,174,6140	0/1:30,12:42:99:1010,0,125	0/1:9,12:21:56.03:172,0,56	0/1:21,18:39:55.07:717,0,55	0/1:29,19:48:36.45:1249,0,36	0/0:55,0:55:99:0,153,5396	0/0:59,0:59:99:0,146,5868	0/0:63,0:63:99:0,187,6611	0/0:36,0:36:99:0,101,3301	0/1:24,0:25:99:392,0,167	0/0:36,0:34:81.28:0,81,2691	0/0:37,0:37:99:0,108,3672	0/0:92,0:92:99:0,256,8900	0/1:15,12:27:28.22:114,0,28	0/1:14,9:23:48.35:114,0,48	0/1:39,11:47:60.54:152,0,61	0/1:18,8:27:87.73:376,0,88	0/0:40,0:40:99:0,120,4166	0/0:32,0:32:93.32:0,93,3446	0/1:18,0:18:14.65:15,0,1371
chr10	73221606	.	TACACACACAA	T	7577.74	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=15.934;DP=1254;FS=18.670;HRun=0;HaplotypeScore=413.8641;InbreedingCoeff=0.8934;MQ=51.98;MQ0=22;MQRankSum=-11.524;QD=21.84;ReadPosRankSum=-4.522;VQSLOD=2.0847;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:39:48.07:843,48,0	0/0:19,0:19:33.11:0,33,1522	0/0:91,0:27:38.91:0,39,811	0/0:90,0:37:68.35:0,68,1574	0/0:33,0:33:75.26:0,75,3449	0/0:34,0:34:84.29:0,84,3679	0/0:40,0:40:90.24:0,90,3460	0/0:64,0:64:99:0,135,3611	0/0:62,0:63:99:0,139,5254	1/1:31,11:42:77.53:1831,78,0	1/1:19,5:23:9.01:201,9,0	1/1:34,0:32:39.06:798,39,0	1/1:46,0:46:78.27:1795,78,0	0/0:47,0:47:99:0,108,4194	0/0:58,0:58:99:0,150,6329	0/0:64,0:64:99:0,148,6502	0/0:37,0:37:84.20:0,84,3353	0/1:27,0:25:51.33:620,0,51	0/0:40,0:35:39.13:0,39,1487	0/0:31,0:31:81.27:0,81,3823	0/0:104,0:104:99:0,205,9497	1/1:21,9:30:7.98:144,8,0	1/1:18,6:24:11.24:186,11,0	1/1:52,0:49:22.07:486,22,0	1/1:28,0:28:33.04:674,33,0	0/0:39,0:39:99:0,108,4298	0/0:33,0:33:69.19:0,69,2623	0/0:20,0:20:29.85:0,30,2125
chr10	73222004	.	C	CCTTT	3604.73	PASS	AB=0.850;AC=17;AF=0.340;AN=50;BaseQRankSum=-8.681;DP=644;FS=1.264;HRun=0;HaplotypeScore=139.0266;InbreedingCoeff=0.6181;MQ=63.99;MQ0=2;MQRankSum=3.003;QD=12.43;ReadPosRankSum=-2.749;VQSLOD=3.1328;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:40:47.63:48,0,68	1/1:10,5:15:15.05:315,15,0	./.	./.	0/0:32,0:33:39.12:0,39,566	0/0:17,0:17:17.62:0,18,354	0/0:19,0:19:24.07:0,24,338	1/1:45,0:45:2.49:6,2,0	1/1:17,6:23:12.04:279,12,0	0/0:25,0:25:32.91:0,33,294	0/0:14,0:14:12.01:0,12,112	0/0:17,0:17:16.58:0,17,147	0/0:18,0:18:18.13:0,18,149	0/0:17,0:17:18.06:0,18,269	0/0:17,0:17:30.08:0,30,416	0/0:22,0:22:27.06:0,27,363	0/0:12,0:23:9.01:0,9,84	./.	1/1:20,9:30:30.09:628,30,0	1/1:15,19:33:54.15:1082,54,0	1/1:8,8:16:18.06:418,18,0	0/0:28,0:27:21.02:0,21,194	0/0:23,0:23:28.85:0,29,256	0/0:24,0:24:17.05:0,17,147	0/0:17,0:17:6.01:0,6,56	0/1:25,7:30:24.56:296,0,25	0/1:23,12:34:21.53:464,0,22	1/1:14,2:16:3.01:70,3,0
chr10	73222005	.	CT	C	251.58	PASS	AB=0.763;AC=8;AF=0.143;AN=56;BaseQRankSum=10.852;DP=643;FS=3.034;HRun=3;HaplotypeScore=108.0949;InbreedingCoeff=-0.1590;MQ=63.92;MQ0=3;MQRankSum=-3.385;QD=1.35;ReadPosRankSum=0.125;VQSLOD=-0.5777;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,6:39:10.18:10,0,371	0/0:15,0:15:45.09:0,45,554	0/0:13,0:11:33:0,33,419	0/0:10,0:10:30.10:0,30,404	0/0:33,0:33:99:0,99,1373	0/0:17,0:17:31.62:0,32,608	0/0:18,0:18:50:0,50,726	0/0:45,0:45:99:0,122,1632	0/0:24,0:23:60.12:0,60,745	0/1:14,11:25:56.33:56,0,187	0/1:9,5:14:4.98:5,0,172	0/1:12,5:17:57.15:57,0,119	0/1:14,3:17:64.54:65,0,130	0/0:17,0:17:48.16:0,48,683	0/0:17,0:17:51.11:0,51,687	0/0:22,0:22:60.20:0,60,853	0/0:23,0:23:27.19:0,27,347	0/0:17,0:17:48.92:0,49,357	0/0:32,0:30:87.16:0,87,1052	0/0:35,0:33:83.78:0,84,919	0/0:16,0:16:42.06:0,42,493	0/1:19,9:27:30.40:30,0,234	0/1:13,10:23:92.52:93,0,174	0/1:15,9:24:67.28:67,0,112	0/0:14,3:17:20.64:0,21,247	0/0:34,0:31:86.90:0,87,1142	0/0:35,0:34:87.20:0,87,1113	0/0:16,0:16:42.13:0,42,575
chr10	73222009	.	CTTT	C	1094.50	PASS	AB=0.742;AC=7;AF=0.125;AN=56;BaseQRankSum=10.288;DP=631;FS=0.979;HRun=3;HaplotypeScore=128.6874;InbreedingCoeff=-0.1453;MQ=62.81;MQ0=7;MQRankSum=-2.791;QD=7.50;ReadPosRankSum=1.721;VQSLOD=0.0872;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:34:20.18:0,20,255	0/0:16,0:16:48.13:0,48,699	0/0:12,0:10:17.12:0,17,335	0/0:9,0:9:25.63:0,26,316	0/0:33,0:33:98.68:0,99,1729	0/0:16,0:16:41.36:0,41,798	0/0:19,0:19:55.43:0,55,1033	0/0:44,0:42:99:0,119,1519	0/0:22,0:21:57.18:0,57,830	0/1:14,0:25:88.31:97,0,88	0/1:8,0:13:23.72:24,0,114	0/1:11,5:16:52.13:190,0,52	0/1:14,4:18:54.07:213,0,54	0/0:16,0:16:48.16:0,48,824	0/0:16,0:16:48.16:0,48,1006	0/0:20,0:20:60.20:0,60,1118	0/0:21,0:21:14.35:0,14,297	0/0:17,0:17:48.21:0,48,288	0/0:34,0:29:85.52:0,86,1294	0/0:35,0:33:93.31:0,93,1652	0/0:20,0:20:52:0,52,768	0/1:18,8:26:99:160,0,171	0/1:14,10:24:80.65:318,0,81	0/1:15,8:23:80.27:224,0,80	0/0:13,0:16:13.76:0,14,167	0/0:34,0:31:93.14:0,93,1374	0/0:35,0:34:87.26:0,87,1328	0/0:16,0:16:45.15:0,45,667
chr10	73222286	.	AT	A	1980.66	PASS	AB=0.967;AC=21;AF=0.375;AN=56;BaseQRankSum=5.536;DP=451;FS=1.071;HRun=2;HaplotypeScore=61.0368;InbreedingCoeff=0.9402;MQ=74.89;MQ0=13;MQRankSum=-3.202;QD=11.65;ReadPosRankSum=-0.604;VQSLOD=1.7019;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:23:41.77:262,42,0	0/0:5,0:5:14.83:0,15,111	0/0:39,0:13:26.10:0,26,208	0/1:28,1:17:1.67:2,0,130	0/0:23,0:23:59.34:0,59,601	0/0:14,0:14:39.02:0,39,358	0/0:12,0:12:30.48:0,30,298	0/0:18,0:18:41.72:0,42,361	0/0:11,0:11:26.89:0,27,250	1/1:15,0:15:34.50:226,34,0	1/1:8,0:8:16.74:94,17,0	1/1:13,3:16:45.27:351,45,0	1/1:9,1:10:26.71:209,27,0	0/0:13,0:12:26.96:0,27,239	0/0:10,0:10:24.01:0,24,228	0/0:11,0:11:29.99:0,30,267	0/0:32,0:32:89.55:0,90,747	1/1:16,0:15:32.34:242,32,0	0/0:21,0:20:53.89:0,54,492	0/0:20,0:20:32.80:0,33,312	0/0:6,0:6:11.99:0,12,102	1/1:8,3:11:23.88:196,24,0	1/1:9,2:11:26.94:218,27,0	1/1:15,2:18:42.37:294,42,0	1/1:11,0:11:15.72:105,16,0	0/0:19,0:18:30.85:0,31,381	0/0:16,0:15:40.83:0,41,377	0/0:11,0:8:16.23:0,16,143
chr10	73222306	.	AAAAAAAC	A	933.71	PASS	AB=0.937;AC=10;AF=0.179;AN=56;BaseQRankSum=8.507;DP=587;FS=19.304;HRun=0;HaplotypeScore=133.9388;InbreedingCoeff=0.2954;MQ=61.47;MQ0=15;MQRankSum=-1.708;QD=7.13;ReadPosRankSum=4.287;VQSLOD=0.9836;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:70.66:0,71,1589	0/0:10,0:10:29.40:0,29,539	0/0:39,0:9:24:0,24,309	0/0:29,0:13:17.62:0,18,232	0/0:34,0:34:89.20:0,89,1763	0/0:21,0:21:63.16:0,63,1474	0/0:22,0:22:58.49:0,58,1094	0/0:20,0:19:44.77:0,45,1052	0/0:16,0:16:43.81:0,44,908	0/1:28,0:27:34.95:35,0,1038	0/1:23,0:23:2.80:3,0,1061	1/1:13,1:14:12.71:184,13,0	0/1:12,1:13:27.24:184,0,27	0/0:17,0:16:34.31:0,34,654	0/0:18,0:18:45.13:0,45,1069	0/0:15,0:15:43:0,43,777	0/0:44,0:44:99:0,122,2565	0/1:17,0:16:44.12:44,0,122	0/0:26,0:25:73.47:0,73,1352	0/0:31,0:31:82.87:0,83,1438	0/0:8,0:8:19.56:0,20,364	0/1:10,3:12:9.30:204,0,9	1/1:7,1:8:19.97:211,20,0	0/1:13,2:15:36.85:220,0,37	0/0:16,0:16:18.30:0,18,898	0/0:30,0:29:81.80:0,82,1706	0/0:23,0:22:65.31:0,65,1333	0/0:9,0:6:15.05:0,15,327
chr10	73222312	.	ACCG	A	1590.51	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=5.769;DP=471;FS=13.611;HRun=0;HaplotypeScore=78.0508;InbreedingCoeff=0.7884;MQ=70.10;MQ0=8;MQRankSum=-4.250;QD=11.69;ReadPosRankSum=-0.819;VQSLOD=1.8208;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:1.32:0,1,219	0/0:10,0:10:19.98:0,20,333	0/0:27,0:9:9.39:0,9,389	0/0:24,0:14:24.58:0,25,425	0/0:32,0:32:52.49:0,52,1209	0/0:14,0:14:17.54:0,18,627	0/0:20,0:20:22.82:0,23,671	0/0:20,0:19:43.66:0,44,611	0/0:13,0:13:22.91:0,23,440	1/1:21,0:20:12.27:201,12,0	1/1:15,1:17:5.03:135,5,0	1/1:4,7:11:14.94:141,15,0	1/1:12,0:12:36.01:328,36,0	0/1:17,0:17:1.55:2,0,526	0/0:16,0:16:28.81:0,29,543	0/0:11,0:11:23.38:0,23,470	0/0:31,0:31:73.27:0,73,1282	1/1:11,1:12:26.25:238,26,0	0/0:22,0:22:36.09:0,36,908	0/0:27,0:27:34.67:0,35,711	0/0:9,0:9:20.64:0,21,349	1/1:10,0:10:26.41:207,26,0	1/1:9,0:9:23.83:210,24,0	1/1:14,0:14:31.22:239,31,0	1/1:9,1:10:5.61:82,6,0	0/0:19,0:19:10.72:0,11,534	0/0:19,0:18:38.48:0,38,708	0/1:3,0:3:9.27:9,0,106
chr10	73225491	.	AGT	A	670.36	PASS	AB=0.917;AC=11;AF=0.196;AN=56;BaseQRankSum=5.906;DP=707;FS=9.858;HRun=0;HaplotypeScore=91.4172;InbreedingCoeff=-0.0603;MQ=63.13;MQ0=12;MQRankSum=1.501;QD=2.68;ReadPosRankSum=1.278;VQSLOD=1.3125;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,19:30:44.96:495,45,0	0/0:9,0:9:21.07:0,21,324	0/0:29,0:15:5.81:0,6,59	0/0:41,0:20:13.52:0,14,169	0/0:23,1:24:4.78:0,5,496	0/0:23,0:22:28.22:0,28,593	0/0:25,0:25:42.11:0,42,606	0/0:26,0:26:40:0,40,566	0/0:25,2:27:25.86:0,26,842	0/0:16,0:25:47.21:0,47,341	0/0:14,0:24:20.85:0,21,182	0/0:20,1:21:1.78:0,2,454	0/0:21,1:21:7.80:0,8,547	0/1:11,4:15:98.19:98,0,378	0/1:27,2:29:11.50:11,0,704	0/0:23,0:23:51.17:0,51,784	0/0:31,0:31:12.12:0,12,837	0/1:22,2:23:20.51:21,0,594	0/1:25,1:25:21.72:22,0,254	0/1:24,1:26:9.14:9,0,470	0/1:24,3:27:80.20:80,0,614	0/0:22,2:23:10.71:0,11,564	0/0:19,1:19:33.09:0,33,485	0/0:41,0:41:87.30:0,87,1343	0/0:9,0:21:16.55:0,17,134	0/1:22,3:24:40.26:40,0,397	0/1:27,2:28:29.53:30,0,445	0/1:18,1:19:14.24:14,0,218
chr10	73225593	.	A	AC	670.39	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.529;DP=552;FS=16.369;HRun=0;HaplotypeScore=60.3022;InbreedingCoeff=0.9791;MQ=68.72;MQ0=0;MQRankSum=-2.518;QD=39.43;ReadPosRankSum=0.124;VQSLOD=2.0296;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.25:0,78,1070	0/0:15,0:15:45.15:0,45,629	0/0:15,0:15:44.35:0,44,569	0/0:7,0:7:20.96:0,21,267	0/0:30,0:30:87.25:0,87,1165	0/0:25,0:25:75.24:0,75,1031	0/0:20,0:20:60.14:0,60,767	0/0:23,0:23:69.21:0,69,923	0/0:19,0:19:54.16:0,54,724	0/0:21,0:21:63.21:0,63,881	0/0:19,0:19:57.19:0,57,797	0/0:18,0:18:51.08:0,51,698	0/0:13,0:13:36.10:0,36,484	0/0:9,0:9:27.08:0,27,359	0/0:27,0:27:81.25:0,81,1098	0/0:17,0:17:51.16:0,51,697	0/0:21,0:21:63.18:0,63,842	1/1:0,17:17:48.16:765,48,0	0/0:17,0:17:48.16:0,48,670	0/0:26,0:26:78.26:0,78,1088	0/0:15,0:15:45.14:0,45,613	0/0:22,0:22:63.21:0,63,880	0/0:18,0:18:54.13:0,54,710	0/0:12,0:12:33.10:0,33,438	0/0:21,0:21:63.21:0,63,881	0/0:29,0:29:87.27:0,87,1199	0/0:45,0:45:99:0,132,1826	0/0:5,0:5:15.05:0,15,210
chr10	73225624	.	GA	G	137.05	PASS	AB=0.920;AC=3;AF=0.054;AN=56;BaseQRankSum=4.901;DP=596;FS=4.311;HRun=10;HaplotypeScore=74.0370;InbreedingCoeff=0.6413;MQ=72.23;MQ0=2;MQRankSum=-0.841;QD=3.92;ReadPosRankSum=-0.521;VQSLOD=0.4502;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:56.60:0,57,593	0/0:19,0:19:57.15:0,57,623	0/0:31,0:24:26.65:0,27,325	0/0:14,0:8:8.85:0,9,93	0/0:25,0:25:59.95:0,60,624	0/0:22,1:24:36.95:0,37,619	0/0:13,0:13:33.09:0,33,365	0/1:21,2:23:5.72:6,0,363	0/0:23,0:23:60.14:0,60,648	0/0:28,0:28:72.14:0,72,759	0/0:26,0:26:69.14:0,69,742	0/0:16,1:17:10:0,10,311	0/0:23,0:23:56.96:0,57,600	0/0:12,0:12:30.08:0,30,328	0/0:24,1:25:34.10:0,34,597	0/0:17,0:17:42.11:0,42,457	0/0:22,0:23:62.97:0,63,660	1/1:4,8:12:26.97:230,27,0	0/0:25,0:26:62.99:0,63,671	0/0:29,1:30:43.11:0,43,690	0/0:20,0:21:56.99:0,57,609	0/0:19,0:19:44.73:0,45,447	0/0:17,0:17:39.09:0,39,423	0/0:9,0:9:21.06:0,21,232	0/0:16,0:16:42.11:0,42,462	0/0:30,0:31:81.04:0,81,869	0/0:39,2:41:36.12:0,36,1054	0/0:6,0:6:18.05:0,18,199
chr10	73225654	.	C	CA	1940.14	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-2.188;DP=588;FS=1.574;HRun=9;HaplotypeScore=72.0167;InbreedingCoeff=0.9643;MQ=78.72;MQ0=2;MQRankSum=-4.166;QD=19.80;ReadPosRankSum=1.632;VQSLOD=4.3867;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,16:22:51.13:555,51,0	0/0:17,0:17:44.99:0,45,391	0/0:41,0:31:51.24:0,51,404	0/0:29,0:20:3.82:0,4,211	0/0:18,0:18:32.97:0,33,286	0/0:21,0:21:50.97:0,51,443	0/0:12,0:12:35.99:0,36,312	0/0:25,0:25:45.02:0,45,484	0/0:25,0:25:71.97:0,72,622	0/0:25,0:25:65.98:0,66,573	0/0:29,0:29:76.23:0,76,660	1/1:4,10:15:17.87:173,18,0	1/1:4,17:21:22.21:470,22,0	0/0:12,0:12:29.98:0,30,258	0/0:21,0:21:59.99:0,60,521	0/0:16,0:16:44.99:0,45,391	0/0:30,0:31:85.98:0,86,725	0/0:3,0:12:19.29:0,19,73	0/0:25,0:25:62.77:0,63,530	0/0:21,0:21:53.97:0,54,468	0/0:26,0:26:65.98:0,66,573	1/1:0,13:13:24.06:265,24,0	1/1:1,14:16:32.81:365,33,0	1/1:1,10:11:27.07:299,27,0	0/0:10,0:10:26.99:0,27,234	0/0:23,0:23:44.96:0,45,388	0/0:42,0:42:99:0,108,933	0/0:8,0:9:23.02:0,23,188
chr10	73225989	.	T	TGGCTGTG	732.73	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.724;DP=476;FS=3.308;HRun=0;HaplotypeScore=122.1367;InbreedingCoeff=0.9819;MQ=91.15;MQ0=0;MQRankSum=-4.837;QD=81.41;ReadPosRankSum=0.454;VQSLOD=4.4824;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.18:0,60,1464	0/0:9,0:9:24.08:0,24,581	0/0:22,0:22:48.16:0,48,1136	0/0:18,0:20:39.16:0,39,865	0/0:21,0:21:60.21:0,60,1513	0/0:17,0:17:45.14:0,45,1055	0/0:13,0:13:39.13:0,39,963	0/0:25,0:25:63.22:0,63,1571	0/0:16,0:16:45.15:0,45,1080	0/0:9,0:9:27.09:0,27,679	0/0:14,0:14:39.13:0,39,990	0/0:18,0:18:48.16:0,48,1207	0/0:8,0:8:21.07:0,21,495	0/0:16,0:16:45.13:0,45,1039	0/0:19,0:19:54.18:0,54,1371	0/0:13,0:13:30.09:0,30,711	0/0:36,0:36:99:0,108,2707	1/1:4,5:9:24.08:826,24,0	0/0:22,0:22:63.18:0,63,1447	0/0:13,0:13:33.09:0,33,703	0/0:20,0:20:57.20:0,57,1447	0/0:7,0:7:18.06:0,18,452	0/0:16,0:16:33.11:0,33,838	0/0:18,0:18:51.18:0,51,1294	0/0:15,0:15:42.13:0,42,988	0/0:16,0:16:48.16:0,48,1219	0/0:27,0:27:69.24:0,69,1736	0/0:16,0:16:48.16:0,48,1184
chr10	73226242	.	T	TGTGTGTGTGCGA	534.19	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=5.526;DP=539;FS=0.000;HRun=0;HaplotypeScore=194.7750;InbreedingCoeff=0.6391;MQ=57.03;MQ0=4;MQRankSum=-1.944;QD=4.34;ReadPosRankSum=-2.848;VQSLOD=1.7075;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:19:0:0,0,0	0/0:8,0:8:21.07:0,21,589	0/0:7,0:2:1.53:0,2,4	0/0:8,0:4:2.25:0,2,14	0/0:22,0:22:57.18:0,57,1831	0/0:20,0:20:57.16:0,57,1679	0/0:29,0:29:81.28:0,81,2441	0/0:27,0:27:68.71:0,69,1518	0/0:11,0:11:30.05:0,30,871	0/0:16,0:16:42.13:0,42,1049	0/0:22,0:22:57.18:0,57,1585	0/1:20,0:20:21.78:22,0,91	0/0:12,0:11:3.79:0,4,17	0/0:18,0:18:44.99:0,45,1185	0/0:10,0:10:30.10:0,30,988	0/0:19,0:19:57.17:0,57,1622	0/0:42,0:41:99:0,120,3844	1/1:6,15:25:20.08:518,20,0	0/0:11,0:11:27.09:0,27,808	0/0:17,0:17:45.02:0,45,1189	0/0:47,0:47:99:0,136,4069	1/1:7,0:7:3:26,3,0	1/1:22,0:22:2.18:24,2,0	1/1:29,0:28:11.93:85,12,0	0/0:23,0:23:54.16:0,54,1418	0/0:20,0:20:57.15:0,57,1865	0/0:18,0:18:45.05:0,45,1151	0/0:9,0:9:27.09:0,27,768
chr10	73226252	.	CGAGCGCGTGT	C	182.95	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=4.053;DP=493;FS=8.466;HRun=0;HaplotypeScore=153.5288;InbreedingCoeff=0.7049;MQ=60.13;MQ0=3;MQRankSum=-2.738;QD=3.98;ReadPosRankSum=-1.022;VQSLOD=1.9008;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:8,0:8:24.08:0,24,1159	0/0:9,0:4:3.15:0,3,149	0/0:10,0:6:9.13:0,9,165	0/0:25,0:25:69.20:0,69,2746	0/0:18,0:18:44.97:0,45,2002	0/0:30,0:30:90.21:0,90,4032	0/0:21,0:21:44.43:0,44,1272	0/0:9,0:9:24.08:0,24,920	0/0:14,0:14:42.14:0,42,2010	0/0:19,0:19:51.12:0,51,2018	1/1:3,15:19:2.79:101,3,0	1/1:4,4:9:9.03:180,9,0	0/0:18,0:18:47.39:0,47,2318	0/0:10,0:10:30.07:0,30,1217	0/0:14,0:14:42.13:0,42,1800	0/0:38,0:37:99:0,108,5155	0/0:22,0:22:26.29:0,26,532	0/0:11,0:11:33.11:0,33,1334	0/0:15,0:15:39.07:0,39,1294	0/0:49,0:49:99:0,147,6404	./.	1/1:6,8:17:0.46:1,0,0	0/0:5,17:24:0.47:0,0,1	0/0:18,0:18:36.59:0,37,1942	0/0:18,0:18:54.06:0,54,2092	0/0:15,0:15:39.08:0,39,1489	0/0:9,0:9:27.07:0,27,1197
chr10	73226258	.	CGTGTGCGCGCGT	C	112.27	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=3.692;DP=498;FS=8.526;HRun=0;HaplotypeScore=173.9984;InbreedingCoeff=0.7214;MQ=60.83;MQ0=3;MQRankSum=-3.726;QD=2.61;ReadPosRankSum=-0.366;VQSLOD=1.7762;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,4:21:0.47:0,0,2	0/0:8,0:8:24.08:0,24,1392	0/0:7,0:3:8.82:0,9,191	0/0:13,0:9:20.88:0,21,717	0/0:24,0:24:69.22:0,69,3351	0/0:16,0:16:45.15:0,45,2347	0/0:31,0:31:93.32:0,93,4694	0/0:22,0:22:51.17:0,51,2038	0/0:9,0:9:24.08:0,24,1035	0/0:16,0:16:48.16:0,48,2492	0/0:15,0:15:42.14:0,42,2393	1/1:17,1:18:3.01:75,3,0	1/1:7,2:8:8.62:136,9,0	0/0:23,0:23:62.46:0,62,3181	0/0:9,0:9:24.08:0,24,1318	0/0:14,0:14:42.14:0,42,2156	0/0:39,0:38:99:0,111,6159	0/0:24,0:24:42.08:0,42,1100	0/0:15,0:15:45.15:0,45,1912	0/0:12,0:12:30.10:0,30,1557	0/0:53,0:53:99:0,160,7938	./.	1/1:13,3:16:0.44:1,0,0	0/0:20,2:22:0.47:0,0,1	0/0:19,0:19:42.14:0,42,2454	0/0:16,0:16:48.16:0,48,2492	0/0:12,0:12:36.12:0,36,1719	0/0:8,0:8:24.08:0,24,1335
chr10	73226268	.	CGT	C	46.59	PASS	AB=0.948;AC=10;AF=0.179;AN=56;BaseQRankSum=-0.391;DP=522;FS=6.677;HRun=0;HaplotypeScore=91.7786;InbreedingCoeff=0.7106;MQ=62.29;MQ0=3;MQRankSum=0.398;QD=0.52;ReadPosRankSum=-3.851;VQSLOD=-0.1215;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,3:23:3.04:25,3,0	0/0:9,0:9:27.08:0,27,487	0/0:12,0:10:24.52:0,25,298	0/0:19,0:14:31.37:0,31,548	0/0:22,0:22:60.16:0,60,1034	0/0:14,0:14:36.11:0,36,661	0/0:33,0:33:93.23:0,93,1597	0/0:22,0:22:54.17:0,54,986	0/0:10,0:10:21.01:0,21,299	0/0:19,0:19:57.18:0,57,987	0/0:14,0:14:42.13:0,42,765	1/1:14,3:17:11.63:73,12,0	0/1:7,0:7:10.10:26,0,10	0/0:23,0:23:66.18:0,66,1167	0/0:10,0:10:30.06:0,30,480	0/0:15,0:15:39.09:0,39,653	0/0:43,0:42:99:0,126,2281	0/0:26,0:26:44.74:0,45,667	0/0:16,0:16:45.12:0,45,758	0/0:11,0:11:30.09:0,30,544	0/0:56,0:56:99:0,162,2737	1/1:5,0:5:2.96:19,3,0	1/1:11,1:12:5.80:39,6,0	0/1:23,3:26:0.20:0,0,0	0/0:17,0:17:45.15:0,45,859	0/0:18,0:18:54.18:0,54,994	0/0:15,0:15:36:0,36,536	0/0:7,0:7:21.07:0,21,405
chr10	73230912	.	C	CG	1298.42	PASS	AC=10;AF=0.238;AN=42;BaseQRankSum=5.451;DP=279;FS=1.390;HRun=1;HaplotypeScore=66.3005;InbreedingCoeff=0.9616;MQ=45.55;MQ0=10;MQRankSum=-3.983;QD=21.64;ReadPosRankSum=-0.583;VQSLOD=3.5343;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:10,0:10:23.99:0,24,258	./.	./.	0/0:21,0:21:54.08:0,54,639	0/0:12,0:12:33:0,33,377	0/0:17,0:17:41.97:0,42,462	0/0:12,0:11:29.85:0,30,324	0/0:7,0:7:15.02:0,15,156	./.	./.	1/1:6,5:12:23.90:300,24,0	1/1:9,4:12:17.82:195,18,0	0/0:12,0:12:33.01:0,33,364	0/0:11,0:11:21.03:0,21,241	0/0:11,0:11:33.03:0,33,368	0/0:27,0:25:39.51:0,40,455	./.	0/0:13,0:12:24.02:0,24,277	0/0:14,0:14:26.95:0,27,312	0/0:5,0:4:6.02:0,6,78	1/1:3,9:12:29.90:360,30,0	1/1:4,8:11:24:298,24,0	1/1:4,7:11:24.45:305,24,0	./.	0/0:9,0:9:27.06:0,27,313	0/0:19,0:19:36.10:0,36,439	0/0:12,0:9:18:0,18,198
chr10	73230924	.	CCAAA	C	159.47	PASS	AB=0.932;AC=5;AF=0.109;AN=46;BaseQRankSum=5.571;DP=367;FS=41.236;HRun=0;HaplotypeScore=81.1214;InbreedingCoeff=-0.1225;MQ=47.86;MQ0=19;MQRankSum=-4.530;QD=2.45;ReadPosRankSum=1.072;VQSLOD=-0.1066;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:10,0:10:29.87:0,30,539	0/0:15,0:3:7.64:0,8,44	0/0:9,0:2:0.92:0,1,34	0/0:19,0:19:52.41:0,52,604	0/0:11,0:11:30.05:0,30,549	0/0:26,0:25:31.15:0,31,810	0/0:19,0:19:42.37:0,42,546	0/0:10,0:10:22.92:0,23,344	./.	./.	0/1:13,0:13:34.35:34,0,119	0/1:9,4:12:64.23:64,0,75	0/0:13,0:14:37.45:0,37,406	0/0:12,0:11:24.05:0,24,359	0/0:12,0:12:36.07:0,36,589	0/0:41,0:39:74.45:0,74,1120	./.	0/0:13,0:12:8.46:0,8,363	0/0:19,0:19:39.31:0,39,626	0/0:8,0:7:18.84:0,19,249	0/1:11,0:11:48.56:49,0,54	0/1:11,0:10:12.33:89,0,12	0/1:15,2:17:35.09:35,0,54	./.	0/0:19,0:20:46.38:0,46,770	0/0:20,0:20:56.92:0,57,792	0/0:14,0:10:24:0,24,401
chr10	73232081	.	GA	G	1411.54	PASS	AB=0.896;AC=13;AF=0.232;AN=56;BaseQRankSum=4.679;DP=650;FS=2.478;HRun=11;HaplotypeScore=79.2116;InbreedingCoeff=0.7449;MQ=71.55;MQ0=2;MQRankSum=-0.214;QD=8.35;ReadPosRankSum=3.408;VQSLOD=2.7275;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,1:47:79.66:0,80,527	0/1:9,2:13:1.60:2,0,200	0/1:28,1:22:5.65:6,0,229	0/0:18,0:13:27.01:0,27,253	0/0:22,0:23:47.24:0,47,520	0/1:18,2:20:7.18:7,0,342	0/0:19,2:21:32.48:0,32,540	0/0:20,2:23:14.43:0,14,536	0/0:18,0:20:47.28:0,47,535	0/0:9,0:20:43.01:0,43,258	0/0:4,0:15:30.61:0,31,201	1/1:4,12:16:26.95:222,27,0	1/1:1,14:17:34.03:258,34,0	0/0:19,2:21:7.80:0,8,474	0/0:22,0:22:60.14:0,60,629	0/0:22,1:23:32.50:0,32,551	0/0:35,0:37:89.06:0,89,941	0/0:7,0:29:48.74:0,49,274	0/0:25,1:26:38.33:0,38,571	0/0:20,0:20:39.69:0,40,424	0/0:27,2:31:28.28:0,28,692	1/1:5,20:25:41.46:332,41,0	1/1:3,20:23:38.52:320,39,0	1/1:6,20:26:53.92:443,54,0	0/0:5,0:28:63.25:0,63,371	0/0:29,1:32:52.49:0,52,761	0/0:17,2:21:19.39:0,19,410	0/0:4,0:4:12.03:0,12,126
chr10	73232504	.	AT	A	1497.50	PASS	AB=0.923;AC=11;AF=0.196;AN=56;BaseQRankSum=7.924;DP=365;FS=3.490;HRun=9;HaplotypeScore=46.2856;InbreedingCoeff=0.7411;MQ=72.16;MQ0=1;MQRankSum=-2.424;QD=15.60;ReadPosRankSum=3.363;VQSLOD=3.6648;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,19:29:59.95:539,60,0	0/0:7,0:7:15.04:0,15,173	0/0:16,0:13:26.33:0,26,226	0/0:12,0:10:8.39:0,8,72	0/0:14,0:14:33.07:0,33,368	0/0:8,0:8:24.07:0,24,277	0/0:7,0:7:15.04:0,15,173	0/0:43,0:43:99:0,102,1154	0/0:8,0:8:18.05:0,18,207	1/1:1,5:6:15.01:137,15,0	1/1:4,14:18:36.01:329,36,0	0/0:9,0:9:21.05:0,21,234	0/0:4,0:4:9.03:0,9,103	0/0:4,0:4:12.04:0,12,138	0/0:11,0:11:24.06:0,24,267	0/0:7,0:7:12.02:0,12,128	0/0:32,0:32:93.25:0,93,1050	1/1:4,9:13:27:247,27,0	0/0:22,0:22:48.12:0,48,531	0/0:13,0:13:24.06:0,24,267	0/0:5,0:5:6:0,6,58	0/0:5,0:5:1.10:0,1,125	0/0:5,0:5:14.99:0,15,158	0/0:6,0:6:6.02:0,6,69	1/1:3,15:18:45.01:411,45,0	0/1:11,1:12:3.40:3,0,218	0/0:10,0:10:0.64:0,1,187	0/0:19,0:19:45.13:0,45,519
chr10	73232536	.	TA	T	692.21	PASS	AB=0.977;AC=14;AF=0.259;AN=54;BaseQRankSum=9.110;DP=259;FS=7.026;HRun=1;HaplotypeScore=35.3173;InbreedingCoeff=0.5503;MQ=53.04;MQ0=5;MQRankSum=-2.370;QD=9.75;ReadPosRankSum=0.297;VQSLOD=0.9040;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:62.40:75,0,62	0/0:4,0:4:12.03:0,12,144	0/0:5,0:2:2.97:0,3,20	0/0:9,0:3:4.41:0,4,14	0/0:12,0:12:30.93:0,31,356	0/0:10,0:10:30.07:0,30,360	0/0:3,0:3:9.01:0,9,102	0/0:34,0:31:85:0,85,918	0/0:4,0:4:12.02:0,12,136	1/1:1,3:4:12.03:152,12,0	1/1:3,3:6:18.04:205,18,0	1/1:4,0:4:3.92:15,4,0	1/1:2,0:2:2.50:10,2,0	0/0:8,0:8:24.06:0,24,276	0/0:5,0:5:15.03:0,15,182	0/0:5,0:5:15.02:0,15,170	0/0:37,0:37:82.13:0,82,1189	0/1:20,1:21:33.26:76,0,33	0/0:22,0:18:54.15:0,54,645	0/0:6,0:6:18.02:0,18,187	0/0:3,0:3:9.03:0,9,113	./.	1/1:2,0:2:2.60:10,3,0	0/0:1,0:1:2.99:0,3,24	1/1:6,4:10:29.97:310,30,0	0/0:10,0:10:6.34:0,6,265	0/0:2,0:2:6.02:0,6,80	0/0:8,0:8:24.02:0,24,247
chr10	73232537	.	AT	A	991.72	PASS	AB=1.000;AC=15;AF=0.300;AN=50;BaseQRankSum=8.848;DP=257;FS=1.307;HRun=9;HaplotypeScore=35.1917;InbreedingCoeff=0.7337;MQ=53.12;MQ0=4;MQRankSum=-3.549;QD=14.17;ReadPosRankSum=0.235;VQSLOD=2.7056;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,14:22:47.97:424,48,0	0/0:4,0:4:12.04:0,12,138	./.	0/0:7,1:3:1.25:0,1,3	0/0:12,0:12:24.07:0,24,277	0/0:10,0:10:27.08:0,27,311	0/0:3,0:3:9.03:0,9,103	0/0:32,2:31:38.02:0,38,605	0/0:4,0:4:12.04:0,12,138	0/1:5,0:5:15.99:43,0,16	1/1:6,0:6:8.93:64,9,0	1/1:0,4:4:11.99:104,12,0	1/1:0,2:2:6:53,6,0	0/0:8,0:8:21.06:0,21,243	0/0:5,0:5:12.04:0,12,139	0/0:5,0:5:12.04:0,12,138	0/0:35,1:38:71.01:0,71,1021	1/1:4,16:20:42:379,42,0	0/0:22,0:18:45.12:0,45,511	0/0:6,0:6:9.03:0,9,104	0/0:3,0:3:9.03:0,9,104	./.	1/1:0,2:2:3:27,3,0	./.	1/1:9,0:9:11.92:71,12,0	0/0:10,0:10:24.06:0,24,268	0/0:2,0:2:6.02:0,6,69	0/0:8,0:8:15.04:0,15,173
chr10	73232957	.	C	CAA	2219.61	PASS	AB=0.940;AC=22;AF=0.393;AN=56;BaseQRankSum=1.962;DP=515;FS=8.035;HRun=14;HaplotypeScore=77.4221;InbreedingCoeff=0.7305;MQ=53.66;MQ0=16;MQRankSum=-0.773;QD=10.52;ReadPosRankSum=-0.653;VQSLOD=1.9212;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,13:28:48.20:544,48,0	0/1:5,0:5:2.25:2,0,19	0/1:9,0:6:6.14:6,0,52	0/0:8,0:8:4.68:0,5,51	0/0:13,0:15:34.71:0,35,247	0/0:17,0:19:23.04:0,23,199	0/0:11,0:16:31.80:0,32,222	0/0:22,0:28:43.35:0,43,351	0/1:15,0:18:0.54:1,0,125	0/1:14,2:22:68.03:82,0,68	1/1:7,0:10:10.12:65,10,0	1/1:10,4:14:21.36:209,21,0	1/1:4,10:17:22.92:250,23,0	0/0:18,0:18:41.81:0,42,350	0/0:17,0:17:21.80:0,22,181	0/0:15,0:20:28.91:0,29,219	0/0:35,0:35:49.82:0,50,376	1/1:16,1:22:21.04:223,21,0	0/0:19,0:19:47.13:0,47,361	0/0:11,0:9:11.90:0,12,142	0/0:18,0:18:29.80:0,30,251	1/1:7,17:25:38.43:460,38,0	1/1:4,6:12:14.41:166,14,0	1/1:5,11:15:24.08:314,24,0	1/1:3,1:7:13.13:103,13,0	0/0:21,0:23:26.34:0,26,254	0/0:25,0:28:38.63:0,39,360	0/0:13,1:13:11.52:0,12,124
chr10	73233027	.	T	TTGCC	6585.20	PASS	AB=0.824;AC=15;AF=0.268;AN=56;BaseQRankSum=12.985;DP=615;FS=4.355;HRun=0;HaplotypeScore=136.8327;InbreedingCoeff=0.5546;MQ=57.62;MQ0=2;MQRankSum=-10.465;QD=29.40;ReadPosRankSum=-2.558;VQSLOD=4.1584;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,10:24:59.88:924,60,0	0/0:9,0:9:24.07:0,24,431	0/0:20,0:15:38.28:0,38,628	0/0:19,0:18:38.21:0,38,606	0/0:23,0:23:66.17:0,66,1199	0/0:19,0:19:51.07:0,51,744	0/0:23,0:23:60.06:0,60,976	0/0:25,0:25:63.10:0,63,832	0/0:21,0:21:54.15:0,54,946	1/1:16,10:25:72.21:1360,72,0	1/1:9,17:26:69.13:1333,69,0	0/1:5,0:21:9.89:311,0,10	0/1:18,0:23:99:208,0,138	0/0:21,0:21:54.12:0,54,963	0/0:18,0:18:45.13:0,45,797	0/0:17,0:17:48.12:0,48,829	0/0:34,0:34:93.23:0,93,1593	1/1:4,21:26:42.10:1030,42,0	0/0:16,0:16:48.12:0,48,804	0/0:20,0:20:57.13:0,57,995	0/0:32,0:32:90.22:0,90,1537	0/1:20,0:23:99:293,0,146	0/1:17,0:19:99:212,0,141	0/1:15,0:16:49.96:50,0,82	1/1:11,9:20:51.08:865,51,0	0/0:27,0:26:75.23:0,75,1345	0/0:34,0:33:84.20:0,84,1446	0/0:13,0:13:38.97:0,39,510
chr10	73233043	.	C	CT	2159.48	PASS	AB=0.558;AC=7;AF=0.125;AN=56;BaseQRankSum=6.820;DP=658;FS=4.726;HRun=1;HaplotypeScore=114.8534;InbreedingCoeff=0.7793;MQ=54.97;MQ0=4;MQRankSum=-6.553;QD=21.38;ReadPosRankSum=-1.094;VQSLOD=3.3806;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:5,19:24:54.07:401,0,54	0/0:8,0:8:21.07:0,21,273	0/0:26,0:17:51.14:0,51,635	0/0:25,0:23:62.98:0,63,778	0/0:28,0:27:78.25:0,78,1012	0/0:15,0:15:33.10:0,33,428	0/0:23,0:23:63.19:0,63,803	0/0:21,0:21:57.16:0,57,724	0/0:20,0:20:54.16:0,54,687	1/1:6,22:27:11.62:770,12,0	1/1:6,25:31:9.08:732,9,0	0/0:28,0:28:29.57:0,30,324	0/0:21,0:21:41.32:0,41,459	0/0:22,0:22:63.19:0,63,804	0/0:21,0:21:51.15:0,51,648	0/0:16,0:16:45.10:0,45,565	0/0:33,0:33:93.30:0,93,1207	0/0:28,0:28:46.77:0,47,322	0/0:24,0:21:60.19:0,60,767	0/0:23,0:23:66.20:0,66,842	0/0:31,0:31:93.29:0,93,1190	0/0:26,0:26:49.69:0,50,582	0/0:19,0:19:43.04:0,43,472	0/0:19,0:19:24.06:0,24,304	1/1:5,13:18:8.75:392,9,0	0/0:30,0:29:84.27:0,84,1090	0/0:35,0:34:99:0,99,1285	0/0:15,0:15:45.13:0,45,569
chr10	73233454	.	GGA	G	126.13	PASS	AB=0.957;AC=15;AF=0.441;AN=34;BaseQRankSum=2.289;DP=349;FS=23.318;HRun=0;HaplotypeScore=51.9589;InbreedingCoeff=-0.0717;MQ=71.53;MQ0=11;MQRankSum=0.093;QD=0.92;ReadPosRankSum=-0.542;VQSLOD=-0.2493;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:5.68:28,6,0	./.	./.	./.	./.	0/0:19,0:17:0:0,0,0	0/1:15,0:16:27.62:28,0,86	0/0:28,0:27:0:0,0,0	0/1:9,0:9:2.89:3,0,23	./.	./.	0/1:12,2:14:36.76:52,0,37	0/1:7,0:6:8.42:8,0,50	0/0:10,0:8:3.01:0,3,44	./.	1/1:7,0:6:2.74:12,3,0	0/1:13,2:15:6.97:26,0,7	./.	0/0:14,0:14:3:0,3,28	0/0:7,0:7:2.99:0,3,23	0/1:25,0:25:19.20:19,0,38	./.	./.	0/1:12,0:12:7.87:8,0,46	1/1:2,0:1:2.84:14,3,0	./.	1/1:7,0:8:5.83:37,6,0	0/0:13,0:12:8.53:0,9,46
chr10	73236739	.	TG	T	5558.35	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.759;DP=636;FS=14.056;HRun=3;HaplotypeScore=60.1086;InbreedingCoeff=0.9972;MQ=86.06;MQ0=0;MQRankSum=-2.592;QD=34.96;ReadPosRankSum=3.227;VQSLOD=4.2117;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,59:60:99:2119,172,0	0/0:8,0:8:24.08:0,24,345	0/0:26,0:26:73.73:0,74,944	0/0:24,0:24:66.17:0,66,879	0/0:25,0:25:72.24:0,72,1028	0/0:27,0:27:81.26:0,81,1150	0/0:26,0:26:78.22:0,78,1088	0/0:15,0:15:45.15:0,45,644	0/0:26,0:26:78.26:0,78,1114	1/1:1,30:31:87.25:1061,87,0	1/1:1,15:16:42.13:520,42,0	0/0:19,0:19:57.18:0,57,802	0/0:16,0:16:48.15:0,48,669	0/0:16,0:16:45.15:0,45,643	0/0:25,0:25:72.24:0,72,1033	0/0:14,0:14:39.12:0,39,543	0/0:24,0:24:69.23:0,69,990	1/1:1,20:21:60.19:744,60,0	0/0:21,0:21:60.14:0,60,803	0/0:20,0:20:57.19:0,57,816	0/0:34,0:34:99:0,99,1418	0/0:10,0:10:30.10:0,30,432	0/0:17,0:17:51.17:0,51,730	0/0:29,0:29:84.28:0,84,1210	1/1:0,31:31:90.28:1115,90,0	0/0:19,1:20:20.05:0,20,737	0/0:28,0:28:84.28:0,84,1209	0/0:7,0:7:21.07:0,21,302
chr10	73238522	.	T	TG	303.34	PASS	AB=0.556;AC=6;AF=0.107;AN=56;BaseQRankSum=4.698;DP=690;FS=7.960;HRun=1;HaplotypeScore=88.7353;InbreedingCoeff=0.6827;MQ=54.29;MQ0=37;MQRankSum=-3.422;QD=7.40;ReadPosRankSum=0.307;VQSLOD=0.2454;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:3,9:10:0:0,0,0	0/0:8,0:8:23.97:0,24,286	0/0:49,0:11:27.08:0,27,343	0/0:64,0:23:58.67:0,59,713	0/0:17,0:16:27.04:0,27,329	0/0:26,0:26:56.95:0,57,683	0/0:32,0:32:88:0,88,1095	0/0:31,0:31:90.03:0,90,1055	0/0:23,0:23:48.38:0,48,553	1/1:5,5:4:12.04:165,12,0	0/1:1,7:7:0:0,0,0	0/0:19,0:18:20.89:0,21,255	0/0:15,0:13:29.82:0,30,330	0/0:17,0:17:48.03:0,48,577	0/0:38,0:38:89.85:0,90,1127	0/0:28,0:28:68.80:0,69,801	0/0:37,0:37:99:0,102,1250	0/1:3,8:11:23.74:157,0,24	0/0:23,0:21:60.10:0,60,706	0/0:16,0:16:33:0,33,400	0/0:81,0:80:99:0,185,2202	0/0:11,0:9:11.03:0,11,125	0/0:8,0:8:12.01:0,12,122	0/0:28,0:25:20.96:0,21,228	1/1:4,8:10:11.63:100,12,0	0/0:28,1:29:84.13:0,84,1023	0/0:26,0:27:50.79:0,51,807	0/0:10,0:8:24.08:0,24,308
chr10	73238547	.	GGTACA	G	497.25	PASS	AB=1.000;AC=15;AF=0.288;AN=52;BaseQRankSum=4.787;DP=666;FS=2.431;HRun=0;HaplotypeScore=119.1683;InbreedingCoeff=0.7572;MQ=52.77;MQ0=50;MQRankSum=-2.079;QD=6.91;ReadPosRankSum=0.090;VQSLOD=2.4785;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:5,0:5:15.05:0,15,439	0/0:97,0:17:48.50:0,49,1122	0/0:100,0:26:57.09:0,57,1378	0/0:14,0:13:33.11:0,33,1006	0/0:19,0:19:50.88:0,51,1532	0/0:30,0:30:84.29:0,84,2652	0/0:31,0:31:80.93:0,81,2419	0/0:18,0:18:38.77:0,39,1135	1/1:1,0:1:1.82:5,2,0	./.	1/1:0,10:12:2.99:49,3,0	1/1:0,7:9:18.06:394,18,0	0/0:18,0:17:48.16:0,48,1418	0/0:30,0:30:75.21:0,75,2123	0/0:26,0:26:73.49:0,73,1992	0/0:34,0:35:99:0,99,3085	1/1:1,1:2:6.02:112,6,0	0/0:17,0:15:44.18:0,44,1109	0/0:14,0:14:26.99:0,27,826	0/0:84,0:83:99:0,207,6130	1/1:0,1:7:0.47:1,0,0	1/1:1,0:5:3.01:31,3,0	1/1:4,14:19:2.69:46,3,0	0/1:3,0:5:0:0,0,0	0/0:20,0:21:60.21:0,60,1742	0/0:19,0:19:56.98:0,57,1646	0/0:10,0:9:27.09:0,27,761
chr10	73238549	.	TAC	T	82.65	PASS	AB=0.950;AC=12;AF=0.240;AN=50;BaseQRankSum=5.999;DP=660;FS=0.000;HRun=0;HaplotypeScore=101.7589;InbreedingCoeff=0.7208;MQ=52.74;MQ0=49;MQRankSum=-2.541;QD=1.22;ReadPosRankSum=0.399;VQSLOD=1.4292;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:5,0:5:15.02:0,15,250	0/0:97,0:18:44.45:0,44,796	0/0:101,0:29:59.68:0,60,926	0/0:14,0:13:33.11:0,33,618	0/0:19,0:19:50.85:0,51,899	0/0:31,0:31:87.28:0,87,1599	0/0:28,0:28:75.26:0,75,1402	0/0:18,1:19:8.19:0,8,644	./.	./.	1/1:11,3:12:3.01:38,3,0	1/1:8,3:9:17.57:121,18,0	0/0:17,0:16:48.16:0,48,910	0/0:32,0:32:71.26:0,71,1302	0/0:26,0:26:72:0,72,1256	0/0:35,0:35:99:0,99,1830	1/1:2,0:2:3.40:18,3,0	0/0:15,1:14:10.52:0,11,657	0/0:14,0:14:26.99:0,27,512	0/0:81,0:80:99:0,202,3674	0/1:8,1:7:0.01:0,0,0	1/1:5,0:4:3:29,3,0	1/1:19,2:18:0.47:1,0,0	0/1:6,0:5:0:0,0,0	0/0:20,0:20:57.08:0,57,1007	0/0:19,1:20:13.47:0,13,925	0/0:10,0:9:24.08:0,24,462
chr10	73238607	.	TG	T	860.73	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.016;DP=753;FS=24.649;HRun=2;HaplotypeScore=108.5555;InbreedingCoeff=0.8955;MQ=46.93;MQ0=56;MQRankSum=-4.354;QD=17.57;ReadPosRankSum=-3.963;VQSLOD=1.6201;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:14,3:16:33.09:376,33,0	0/0:10,0:10:27.05:0,27,374	0/0:95,0:11:24.53:0,25,277	0/0:85,4:16:24.37:0,24,320	0/0:22,0:22:43.23:0,43,532	0/0:18,0:19:42.05:0,42,561	0/0:27,0:27:75.31:0,75,1021	0/0:29,0:29:82:0,82,1064	0/0:19,0:19:54.13:0,54,732	1/1:5,4:8:8.40:207,8,0	1/1:5,2:6:8.24:83,8,0	0/0:26,0:25:47.02:0,47,669	0/0:9,0:9:21.03:0,21,276	0/0:22,1:22:53.21:0,53,719	0/0:35,0:34:75.03:0,75,973	0/0:20,0:20:49.14:0,49,618	0/0:33,0:33:83.28:0,83,1155	0/0:8,0:7:10.46:0,10,90	0/0:21,0:17:48.15:0,48,649	0/0:20,0:20:45.01:0,45,626	0/0:86,2:83:99:0,199,2765	0/0:25,0:23:35.01:0,35,405	0/0:7,0:5:2.61:0,3,45	0/0:20,1:19:18.06:0,18,260	1/1:14,2:15:30.06:345,30,0	0/0:32,0:30:54.20:0,54,1024	0/0:18,0:17:45.15:0,45,652	0/0:8,0:8:23.11:0,23,315
chr10	73238608	.	G	GT	971.90	PASS	AB=0.611;AC=9;AF=0.161;AN=56;BaseQRankSum=7.332;DP=756;FS=23.230;HRun=1;HaplotypeScore=110.5466;InbreedingCoeff=0.8187;MQ=47.36;MQ0=54;MQRankSum=-4.883;QD=15.68;ReadPosRankSum=-3.764;VQSLOD=1.6919;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,10:17:33.09:382,33,0	0/0:10,0:10:27.05:0,27,353	0/0:93,0:12:24.06:0,24,269	0/0:86,0:16:24.40:0,24,316	0/0:22,0:22:43.85:0,44,518	0/0:20,0:20:42.05:0,42,534	0/0:28,0:28:71.79:0,72,980	0/0:28,0:29:81.01:0,81,1042	0/0:20,0:20:54.13:0,54,701	1/1:5,3:8:21.95:287,22,0	1/1:2,5:6:9.02:104,9,0	0/0:25,0:25:47.95:0,48,641	0/0:9,0:9:21.03:0,21,261	0/0:21,0:22:54.13:0,54,709	0/0:34,0:34:75.01:0,75,925	0/0:18,0:20:51:0,51,614	0/0:32,0:33:84.21:0,84,1118	0/1:4,1:10:9.32:9,0,61	0/0:21,0:17:48.15:0,48,631	0/0:19,0:20:46.15:0,46,605	0/0:84,0:83:99:0,206,2720	0/0:23,0:23:35.94:0,36,407	0/0:7,0:5:2.99:0,3,42	0/0:19,1:19:18.06:0,18,248	1/1:5,12:16:30.09:349,30,0	0/0:28,1:29:27.27:0,27,965	0/0:18,0:17:45.15:0,45,615	0/0:7,0:8:24.04:0,24,310
chr10	73239068	.	TC	T	6405.52	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=11.783;DP=640;FS=15.563;HRun=6;HaplotypeScore=69.7196;InbreedingCoeff=0.9202;MQ=73.37;MQ0=1;MQRankSum=-0.050;QD=24.45;ReadPosRankSum=2.173;VQSLOD=3.5612;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,36:42:99:1064,99,0	0/0:6,0:6:15.05:0,15,196	0/1:29,0:25:25.41:25,0,346	0/0:20,0:18:22.20:0,22,326	0/0:18,0:18:54.18:0,54,708	0/0:14,0:14:39.13:0,39,512	0/0:32,0:32:81.25:0,81,1047	0/0:30,0:30:62.55:0,63,773	0/0:16,0:16:42.12:0,42,537	1/1:1,17:18:48.12:516,48,0	1/1:0,14:14:36.09:386,36,0	1/1:1,26:27:72.18:774,72,0	1/1:0,18:18:51.13:548,51,0	0/0:27,0:27:78.23:0,78,1009	0/0:26,0:26:75.23:0,75,973	0/0:26,0:26:71.96:0,72,905	0/0:33,0:33:99:0,99,1303	1/1:1,20:21:45.11:484,45,0	0/0:20,0:20:54.14:0,54,667	0/0:16,0:16:42.14:0,42,552	0/0:35,0:35:99:0,105,1350	1/1:0,14:14:42.11:451,42,0	1/1:2,15:17:45.11:482,45,0	1/1:3,43:46:99:1258,117,0	1/1:0,16:16:39.10:418,39,0	0/0:19,1:20:21.92:0,22,639	0/0:29,0:29:87.28:0,87,1143	0/0:7,0:7:21.07:0,21,276
chr10	73239942	.	A	ACCAT	1034.53	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.366;DP=595;FS=0.000;HRun=0;HaplotypeScore=101.0542;InbreedingCoeff=0.9469;MQ=78.58;MQ0=0;MQRankSum=-1.353;QD=79.58;ReadPosRankSum=1.048;VQSLOD=5.5512;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.31:0,93,1883	0/0:6,0:6:18.06:0,18,378	0/0:11,0:11:26.24:0,26,567	0/0:18,0:18:51.14:0,51,923	0/0:24,0:24:72.25:0,72,1449	0/0:22,0:22:63.20:0,63,1271	0/0:26,0:26:78.25:0,78,1586	0/0:35,0:35:81.27:0,81,1660	0/0:14,0:14:39.13:0,39,817	0/0:24,0:24:69.22:0,69,1374	0/0:11,0:11:33.08:0,33,648	0/0:24,0:24:66.17:0,66,1289	0/0:17,0:17:51.17:0,51,1044	0/0:30,0:30:87.30:0,87,1806	0/0:26,0:25:75.24:0,75,1532	0/0:17,0:17:45.10:0,45,900	0/0:35,0:35:99:0,102,2095	1/1:0,13:13:39.13:1129,39,0	0/0:18,0:18:51.16:0,51,1010	0/0:16,0:16:48.16:0,48,1007	0/0:45,0:44:99:0,135,2793	0/0:20,0:20:60.18:0,60,1184	0/0:5,0:5:15.05:0,15,301	0/0:45,0:45:99:0,129,2577	0/0:18,0:18:48.16:0,48,1007	0/0:19,0:19:54.19:0,54,1128	0/0:19,0:19:57.20:0,57,1191	0/0:4,0:4:12.04:0,12,247
chr10	73240096	.	TAC	T	1040.63	PASS	AB=0.904;AC=20;AF=0.385;AN=52;BaseQRankSum=5.305;DP=734;FS=0.000;HRun=0;HaplotypeScore=99.0254;InbreedingCoeff=0.0615;MQ=55.14;MQ0=31;MQRankSum=0.392;QD=2.59;ReadPosRankSum=1.957;VQSLOD=1.9549;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:35:5.56:28,6,0	0/0:9,0:9:11.93:0,12,113	./.	./.	0/0:32,0:32:6.99:0,7,248	0/1:17,2:19:10.89:11,0,230	0/0:32,4:36:5.08:0,5,421	0/0:22,0:21:8.99:0,9,85	0/0:11,0:22:18.01:0,18,176	0/0:27,0:24:26.07:0,26,305	0/1:15,0:15:21.58:22,0,81	1/1:13,9:21:11.90:131,12,0	1/1:14,5:19:15.04:164,15,0	0/1:26,2:27:68.42:68,0,240	0/1:31,2:31:23.60:24,0,456	0/1:15,4:19:23.80:24,0,81	0/0:28,1:29:6.53:0,7,463	0/0:15,0:15:12.09:0,12,73	0/0:14,0:14:5.38:0,5,53	0/1:25,3:29:74.72:75,0,244	0/1:58,1:57:35.72:36,0,638	0/1:8,7:14:27.99:116,0,28	1/1:8,4:12:9.45:99,9,0	1/1:33,9:43:2.38:383,2,0	0/0:14,0:14:21.54:0,22,312	0/1:28,1:29:5.66:6,0,267	0/1:22,2:24:20.60:21,0,468	0/0:7,0:7:16.24:0,16,180
chr10	73242301	.	TACACAC	T	2497.12	PASS	AB=0.567;AC=9;AF=0.167;AN=54;BaseQRankSum=6.316;DP=452;FS=13.388;HRun=0;HaplotypeScore=105.0674;InbreedingCoeff=0.7484;MQ=64.74;MQ0=10;MQRankSum=-6.715;QD=33.29;ReadPosRankSum=1.236;VQSLOD=2.5329;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:20:33.11:0,33,926	0/0:4,0:4:12.04:0,12,388	0/0:34,0:20:5.99:0,6,50	0/0:30,0:15:3.01:0,3,42	0/0:9,0:9:20.71:0,21,587	0/0:12,0:16:36.11:0,36,980	0/0:24,0:24:42.10:0,42,1096	0/0:30,0:29:42.96:0,43,878	0/0:16,0:17:48.15:0,48,1386	0/0:12,0:12:30.10:0,30,795	./.	1/1:7,11:16:39.06:687,39,0	0/1:4,12:15:11.80:609,0,12	0/0:12,0:15:29.26:0,29,784	0/0:19,0:19:54.13:0,54,1607	0/0:18,0:22:57.17:0,57,1600	0/0:16,0:18:42.13:0,42,1054	0/0:13,0:15:33.11:0,33,886	0/0:11,0:9:9.92:0,10,289	0/0:3,0:4:9.03:0,9,269	0/0:16,0:19:45.55:0,46,1002	1/1:2,6:8:9.03:186,9,0	1/1:6,5:12:27.08:486,27,0	1/1:9,9:20:39.54:687,40,0	0/0:12,0:12:8.95:0,9,113	0/0:19,0:22:49.65:0,50,1294	0/0:8,0:11:21.07:0,21,474	0/0:4,0:4:12.04:0,12,384
chr10	73242404	.	TCATAA	T	3481.89	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.725;DP=601;FS=3.131;HRun=0;HaplotypeScore=112.3694;InbreedingCoeff=0.9979;MQ=80.24;MQ0=0;MQRankSum=-3.288;QD=40.02;ReadPosRankSum=3.937;VQSLOD=3.4958;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.25:0,72,2097	0/0:8,0:8:24.08:0,24,724	0/0:18,0:18:48.16:0,48,1324	0/0:28,0:28:68.55:0,69,1780	0/0:24,0:24:63.17:0,63,1826	0/0:23,0:23:66.23:0,66,1973	0/0:30,0:30:81.22:0,81,2261	0/0:37,0:37:87.30:0,87,2524	0/0:15,0:15:42.14:0,42,1263	0/0:22,0:22:66.23:0,66,1914	0/0:18,0:18:51.18:0,51,1527	1/1:3,15:18:30.10:604,30,0	1/1:0,21:21:45.15:906,45,0	0/0:12,0:12:33.11:0,33,995	0/0:26,0:26:78.27:0,78,2332	0/0:21,0:21:57.20:0,57,1677	0/0:24,0:24:66.23:0,66,1966	0/0:12,0:12:24.08:0,24,723	0/0:23,0:22:57.20:0,57,1667	0/0:17,0:17:48.16:0,48,1407	0/0:53,0:53:99:0,154,4523	1/1:2,14:16:42.10:805,42,0	1/1:0,8:8:21.03:383,21,0	1/1:1,23:23:39.13:784,39,0	0/0:15,0:15:42.14:0,42,1265	0/0:29,0:29:78.27:0,78,2300	0/0:16,0:16:42.14:0,42,1265	0/0:17,0:17:51.18:0,51,1516
chr10	73242580	.	T	TG	342.35	PASS	AB=0.860;AC=13;AF=0.232;AN=56;BaseQRankSum=0.524;DP=323;FS=6.232;HRun=11;HaplotypeScore=55.3488;InbreedingCoeff=0.1676;MQ=77.68;MQ0=14;MQRankSum=-0.242;QD=3.29;ReadPosRankSum=-0.398;VQSLOD=-0.7018;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:20:27.91:0,28,194	0/0:1,0:1:2.99:0,3,23	0/0:28,1:14:28.58:0,29,189	0/1:20,0:8:13.01:13,0,58	0/0:9,0:9:8.01:0,8,52	0/0:10,0:10:20.83:0,21,155	0/0:18,0:16:23.80:0,24,186	0/0:13,0:14:1.98:0,2,5	0/0:6,0:7:11:0,11,76	1/1:3,3:6:5.98:52,6,0	0/1:8,4:11:14.20:52,0,14	0/1:9,1:9:14.19:45,0,14	1/1:6,4:9:9.02:91,9,0	0/0:7,0:7:14.93:0,15,114	0/0:11,0:10:12.38:0,12,94	0/0:6,0:8:10.96:0,11,75	0/0:22,0:23:31.69:0,32,227	0/1:7,5:11:22.83:95,0,23	0/0:7,0:7:11.94:0,12,92	0/0:9,0:9:14.16:0,14,98	0/0:14,0:14:5.93:0,6,46	0/1:7,1:8:18.87:19,0,41	0/1:11,0:10:21.36:21,0,32	0/1:7,3:10:8.02:87,0,8	1/1:5,0:4:2.97:20,3,0	0/0:16,0:16:14.92:0,15,116	0/0:9,0:9:21.81:0,22,164	0/0:4,0:3:8.97:0,9,70
chr10	73243831	.	C	CT	2812.37	PASS	AB=0.786;AC=10;AF=0.179;AN=56;BaseQRankSum=-10.515;DP=683;FS=3.017;HRun=9;HaplotypeScore=63.1214;InbreedingCoeff=0.7636;MQ=69.54;MQ0=1;MQRankSum=0.160;QD=20.83;ReadPosRankSum=2.077;VQSLOD=4.4487;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:36:99:0,101,865	0/0:8,0:8:20.98:0,21,179	0/0:13,0:12:29.96:0,30,252	0/1:13,0:12:11.04:11,0,74	0/0:25,0:27:69.89:0,70,572	0/0:30,0:30:80.97:0,81,703	0/0:14,0:14:38.97:0,39,335	0/0:35,0:36:67.97:0,68,574	0/0:16,0:16:35.96:0,36,305	0/0:36,0:36:80.95:0,81,699	0/0:31,0:32:83.01:0,83,709	0/1:5,15:20:23.98:444,0,24	1/1:2,16:18:45.12:498,45,0	0/0:17,0:17:44.99:0,45,391	0/0:23,0:23:56.98:0,57,495	0/0:21,0:21:50.97:0,51,440	0/0:34,0:34:92.98:0,93,807	0/0:20,0:21:56.01:0,56,475	0/0:28,0:29:67.95:0,68,574	0/0:35,1:36:56.79:0,57,722	0/0:13,0:13:35.03:0,35,293	1/1:10,23:33:40.14:670,40,0	1/1:2,21:23:54.15:597,54,0	1/1:3,25:28:69.19:761,69,0	0/0:25,0:25:71.98:0,72,625	0/0:33,0:33:80.95:0,81,700	0/0:31,0:32:80.02:0,80,683	0/0:16,0:16:38.99:0,39,338
chr10	73244946	.	G	GC	8698.19	PASS	AB=0.920;AC=19;AF=0.339;AN=56;BaseQRankSum=-14.047;DP=610;FS=1.041;HRun=0;HaplotypeScore=59.5091;InbreedingCoeff=0.9203;MQ=90.80;MQ0=0;MQRankSum=-0.198;QD=39.36;ReadPosRankSum=2.458;VQSLOD=5.2661;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,45:46:99:1965,123,0	0/0:14,0:14:39.09:0,39,493	0/0:26,0:26:74.26:0,74,994	0/0:24,0:24:63.05:0,63,802	0/0:16,0:16:48.16:0,48,670	0/0:22,0:22:66.22:0,66,923	0/0:30,0:30:90.24:0,90,1189	0/0:18,0:18:54.16:0,54,725	0/0:16,0:16:48.16:0,48,670	1/1:0,14:14:42.14:671,42,0	1/1:0,16:16:45.15:719,45,0	1/1:0,28:28:72.25:1151,72,0	1/1:0,30:30:81.28:1293,81,0	0/0:17,0:17:51.17:0,51,713	0/0:19,0:19:57.19:0,57,797	0/0:16,0:15:48.14:0,48,653	0/0:37,0:37:99:0,111,1529	0/0:25,0:25:75.25:0,75,1044	0/0:23,0:23:57.18:0,57,778	0/0:23,0:23:69.20:0,69,929	0/0:26,0:26:75.25:0,75,1049	1/1:2,16:18:48.16:764,48,0	1/1:1,16:17:45.15:718,45,0	1/1:0,20:20:60.20:959,60,0	1/1:0,9:9:27.09:432,27,0	0/1:21,2:23:26.73:27,0,811	0/0:23,0:23:69.21:0,69,945	0/0:14,0:14:42.14:0,42,587
chr10	73245724	.	CCTTCT	C	11978.23	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=16.783;DP=743;FS=0.308;HRun=0;HaplotypeScore=153.5133;InbreedingCoeff=0.9962;MQ=80.73;MQ0=1;MQRankSum=-5.778;QD=49.70;ReadPosRankSum=6.367;VQSLOD=4.7472;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,44:46:99:2475,114,0	0/0:6,0:6:18.06:0,18,524	0/0:29,0:30:74.58:0,75,2193	0/0:22,0:22:59.97:0,60,1631	0/0:29,0:29:84.28:0,84,2518	0/0:14,0:14:42.14:0,42,1333	0/0:37,0:37:99:0,111,3368	0/0:35,0:35:99:0,102,3191	0/0:24,0:24:69.20:0,69,2109	1/1:2,34:35:99:2174,102,0	1/1:0,13:13:21.07:456,21,0	1/1:2,33:35:84.29:1824,84,0	1/1:1,19:20:54.19:1172,54,0	0/0:34,0:34:99:0,102,3155	0/0:27,0:27:78.27:0,78,2403	0/0:25,0:25:75.26:0,75,2380	0/0:42,0:42:99:0,123,3759	0/0:22,0:22:66.11:0,66,1783	0/0:22,0:22:63.22:0,63,1866	0/0:27,0:27:72.25:0,72,2220	0/0:40,0:40:99:0,114,3579	1/1:1,25:26:51.18:1107,51,0	1/1:2,20:22:42.01:862,42,0	1/1:2,23:25:54.19:1172,54,0	1/1:2,16:18:36.08:737,36,0	0/0:27,1:28:16.20:0,16,2339	0/0:23,0:23:69.24:0,69,2171	0/0:15,0:15:45.14:0,45,1357
chr10	73246346	.	AT	A	9402.40	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=20.409;DP=730;FS=3.773;HRun=1;HaplotypeScore=100.9961;InbreedingCoeff=0.9738;MQ=85.10;MQ0=0;MQRankSum=-9.094;QD=37.61;ReadPosRankSum=3.257;VQSLOD=5.1762;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,47:47:99:1862,138,0	0/0:12,0:12:36.12:0,36,575	0/0:21,0:21:60.20:0,60,942	0/0:24,0:24:47.59:0,48,953	0/0:15,0:15:45.14:0,45,696	0/0:20,0:20:60.16:0,60,889	0/0:26,0:26:78.27:0,78,1242	0/0:28,0:28:83.31:0,83,1278	0/0:32,0:32:96.28:0,96,1460	1/1:0,26:26:78.26:1090,78,0	1/1:0,20:20:54.04:686,54,0	1/1:0,24:24:66.22:923,66,0	1/1:0,28:28:75.25:1048,75,0	0/0:38,0:38:99:0,114,1797	0/0:32,0:32:96.30:0,96,1487	0/0:29,0:29:87.27:0,87,1339	0/0:31,0:30:93.32:0,93,1480	0/0:25,0:25:75.23:0,75,1164	0/0:18,0:18:54.13:0,54,790	0/0:17,0:17:51.16:0,51,791	0/0:49,0:49:99:0,148,2341	1/1:0,27:27:75.25:1048,75,0	1/1:0,19:19:48.16:671,48,0	1/1:0,26:26:60.20:839,60,0	1/1:0,33:33:90.26:1235,90,0	0/0:27,2:29:3.39:0,3,1164	0/0:27,0:27:81.25:0,81,1241	0/0:7,0:7:21.07:0,21,335
chr10	73247294	.	GA	G	5629.27	PASS	AB=0.974;AC=48;AF=0.857;AN=56;BaseQRankSum=5.893;DP=518;FS=12.080;HRun=1;HaplotypeScore=118.9732;InbreedingCoeff=-0.1848;MQ=79.56;MQ0=0;MQRankSum=-4.543;QD=10.87;ReadPosRankSum=9.198;VQSLOD=1.0504;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:36,3:39:5.35:364,0,5	0/1:9,0:9:18.75:84,0,19	0/1:25,0:25:23.26:23,0,197	0/1:23,0:22:45.95:116,0,46	1/1:7,4:11:20.44:134,20,0	1/1:19,0:19:49.10:275,49,0	1/1:19,0:19:26.40:189,26,0	1/1:23,1:24:39.20:235,39,0	1/1:22,0:22:39.22:332,39,0	1/1:15,2:16:41.51:215,42,0	1/1:9,1:10:23.29:156,23,0	0/1:15,0:15:9.15:160,0,9	1/1:17,0:17:49.40:294,49,0	1/1:24,1:25:65.77:384,66,0	1/1:24,0:24:46.22:312,46,0	1/1:20,0:19:7.72:201,8,0	1/1:28,0:28:73.49:374,73,0	1/1:9,0:9:1.80:91,2,0	0/1:15,1:16:11.37:110,0,11	1/1:17,0:17:28.94:150,29,0	1/1:31,0:31:43.81:306,44,0	1/1:19,3:22:52.73:337,53,0	1/1:11,0:11:4.06:139,4,0	0/1:21,0:21:18.36:160,0,18	0/1:11,1:12:21.87:102,0,22	1/1:15,2:17:27.37:226,27,0	1/1:13,0:13:6.82:142,7,0	1/1:2,0:2:2.64:16,3,0
chr10	73247771	.	TTC	T	105.03	PASS	AB=0.951;AC=7;AF=0.146;AN=48;BaseQRankSum=3.539;DP=573;FS=0.880;HRun=0;HaplotypeScore=119.6878;InbreedingCoeff=0.3881;MQ=57.73;MQ0=3;MQRankSum=-2.235;QD=1.67;ReadPosRankSum=0.773;VQSLOD=2.3046;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:6.43:0,6,45	0/0:7,0:7:15.05:0,15,222	0/0:25,0:15:12.18:0,12,142	0/0:26,0:19:13.67:0,14,124	0/0:14,1:15:0.59:0,1,451	0/0:31,1:32:21.79:0,22,890	0/0:34,0:34:81.04:0,81,1148	0/0:29,0:28:56.67:0,57,821	0/0:26,1:27:19.37:0,19,768	1/1:11,0:11:3.96:22,4,0	0/1:19,0:19:0.19:0,0,0	./.	./.	0/0:22,0:21:30.12:0,30,543	0/0:29,0:29:33.75:0,34,942	0/0:22,0:22:48.16:0,48,722	0/0:16,0:16:33.11:0,33,519	1/1:8,0:8:15.04:174,15,0	0/0:22,0:21:6.61:0,7,531	0/1:11,1:12:15.17:15,0,263	0/0:62,1:63:61.36:0,61,1847	0/0:10,0:10:2.95:0,3,24	./.	0/0:11,0:11:2.99:0,3,23	./.	0/0:25,0:24:51.15:0,51,744	0/0:30,0:30:28.85:0,29,852	0/1:12,1:12:8.46:8,0,336
chr10	73247787	.	CTCTCTCTT	C	78.07	PASS	AB=0.792;AC=8;AF=0.148;AN=54;BaseQRankSum=5.461;DP=565;FS=2.113;HRun=0;HaplotypeScore=166.1276;InbreedingCoeff=0.5121;MQ=53.67;MQ0=5;MQRankSum=-2.788;QD=0.88;ReadPosRankSum=-2.854;VQSLOD=2.4793;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:22:4.27:6,0,4	0/0:7,0:7:20.92:0,21,523	0/1:32,0:10:13.92:14,0,188	0/0:27,0:16:19.39:0,19,260	0/0:18,0:18:41.83:0,42,1299	0/0:30,0:30:82.40:0,82,2676	0/0:40,0:40:99:0,111,3149	0/0:31,0:30:78.18:0,78,1854	0/0:27,0:26:69.19:0,69,2467	1/1:7,0:7:17.94:155,18,0	0/0:14,2:16:10.18:0,10,37	1/1:0,6:6:2.94:18,3,0	./.	0/0:20,0:19:46.62:0,47,1633	0/0:31,0:31:87.08:0,87,2731	0/0:19,0:19:54.02:0,54,1671	0/0:15,0:15:42.98:0,43,1362	0/0:9,0:9:4.40:0,4,94	0/0:26,0:24:41.83:0,42,1578	0/0:12,0:12:33.10:0,33,1112	0/0:57,0:57:99:0,147,4806	0/0:6,0:6:2.37:0,2,8	0/1:2,8:10:0:0,0,0	0/1:4,7:11:0:0,0,0	0/0:9,1:10:2.50:0,2,9	0/0:24,0:23:52.77:0,53,1892	0/0:27,0:27:62.47:0,62,2420	0/0:11,0:10:30.10:0,30,1155
chr10	73247789	.	CTCTCTT	C	192.78	PASS	AB=0.989;AC=8;AF=0.154;AN=52;BaseQRankSum=6.001;DP=556;FS=10.735;HRun=0;HaplotypeScore=145.4735;InbreedingCoeff=0.5078;MQ=53.54;MQ0=5;MQRankSum=-4.425;QD=2.22;ReadPosRankSum=-2.453;VQSLOD=1.7093;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,1:21:3.68:9,0,4	0/0:7,0:7:20.92:0,21,426	0/1:34,0:10:21.72:22,0,128	0/0:27,0:14:9.17:0,9,178	0/0:17,0:17:41.83:0,42,1058	0/0:30,0:30:82.61:0,83,2163	0/0:41,0:41:99:0,117,2560	0/0:31,0:30:78.11:0,78,1431	0/0:25,0:24:69.16:0,69,1890	1/1:2,5:7:17.94:229,18,0	0/0:12,2:14:9.54:0,10,36	1/1:6,0:6:2.94:18,3,0	./.	0/0:19,0:18:46.62:0,47,1299	0/0:30,0:30:87.08:0,87,2193	0/0:19,0:19:54.02:0,54,1349	0/0:15,0:15:27.03:0,27,1075	0/1:9,0:9:1.58:40,0,2	0/0:27,0:25:39.66:0,40,1240	0/0:11,0:11:33.10:0,33,871	0/0:56,0:56:99:0,150,3826	0/0:6,0:6:2.37:0,2,8	0/1:9,0:9:0:0,0,0	./.	0/0:3,7:10:2.50:0,2,9	0/0:25,0:24:35.78:0,36,1483	0/0:28,0:28:65.46:0,65,1951	0/0:11,0:10:30.10:0,30,911
chr10	73247795	.	TTC	T	135.94	PASS	AB=1.000;AC=7;AF=0.152;AN=46;BaseQRankSum=3.874;DP=552;FS=14.296;HRun=0;HaplotypeScore=111.7453;InbreedingCoeff=0.5062;MQ=55.49;MQ0=5;MQRankSum=-1.337;QD=1.56;ReadPosRankSum=-0.644;VQSLOD=1.4592;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:17:2.15:0,2,6	0/0:8,0:8:18.06:0,18,280	0/1:34,0:10:45.92:46,0,123	0/0:32,0:17:15.33:0,15,212	0/0:15,0:15:34.35:0,34,535	0/0:30,0:30:72.11:0,72,1106	0/0:40,1:41:67.44:0,67,1509	0/0:33,0:32:66.19:0,66,972	0/0:28,0:27:67.62:0,68,996	1/1:7,0:7:4.95:24,5,0	0/1:12,0:12:0.34:0,0,0	./.	./.	0/0:17,0:16:42.09:0,42,613	0/0:32,0:32:75.17:0,75,1151	0/0:20,0:20:42.14:0,42,662	0/0:15,0:15:33.11:0,33,538	1/1:5,3:8:11.99:130,12,0	0/0:25,0:23:51.15:0,51,792	0/0:12,0:12:32.01:0,32,486	0/0:53,0:53:99:0,126,1902	./.	./.	./.	0/0:8,0:8:0:0,0,0	0/1:26,0:25:53.12:53,0,731	0/0:26,0:26:63.18:0,63,940	0/0:12,0:11:29.75:0,30,418
chr10	73247962	.	T	TA	413.65	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=2.377;DP=474;FS=16.321;HRun=0;HaplotypeScore=55.1811;InbreedingCoeff=0.8747;MQ=65.00;MQ0=10;MQRankSum=-3.159;QD=6.27;ReadPosRankSum=-0.656;VQSLOD=1.4000;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:29.41:181,29,0	0/0:11,0:11:33.08:0,33,435	0/0:59,0:26:36.90:0,37,383	0/0:66,0:16:23.55:0,24,177	0/0:30,0:30:84.01:0,84,998	0/0:17,0:17:48.12:0,48,590	0/0:8,0:8:24:0,24,235	0/0:32,0:32:84.15:0,84,995	0/0:13,0:13:39.01:0,39,450	1/1:0,12:12:20.82:155,21,0	1/1:5,0:5:8.43:52,8,0	1/1:2,0:2:5.69:30,6,0	1/1:6,0:6:8.80:53,9,0	0/0:5,0:5:15.01:0,15,159	0/0:16,0:16:48.09:0,48,549	0/0:14,0:14:39:0,39,423	0/0:22,0:22:66.11:0,66,840	0/0:16,0:16:32.77:0,33,238	0/0:16,0:16:48.11:0,48,618	0/0:14,0:14:42.05:0,42,497	0/0:9,0:9:24.04:0,24,283	1/1:0,15:15:5.63:30,6,0	1/1:4,0:4:11.72:69,12,0	1/1:4,0:4:2.83:23,3,0	1/1:0,8:8:2.68:11,3,0	0/0:19,0:19:54.13:0,54,646	0/0:18,0:18:45.06:0,45,525	0/0:21,0:21:63.08:0,63,742
chr10	73248173	.	A	AT	62.11	PASS	AC=10;AF=0.208;AN=48;BaseQRankSum=3.972;DP=423;FS=15.224;HRun=0;HaplotypeScore=47.8950;InbreedingCoeff=0.7719;MQ=67.57;MQ0=15;MQRankSum=-1.888;QD=4.78;ReadPosRankSum=-3.414;VQSLOD=0.9359;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,3:4:3:25,3,0	0/0:10,0:10:27.08:0,27,363	0/0:15,0:13:36.11:0,36,488	0/0:25,0:20:54.18:0,54,741	0/0:23,0:23:60.20:0,60,839	0/0:15,0:15:42.10:0,42,560	0/0:35,0:34:99:0,102,1375	0/0:30,0:25:72.24:0,72,1004	0/0:17,0:17:51.17:0,51,709	./.	1/1:0,1:1:3.01:38,3,0	./.	1/1:2,0:1:2.98:21,3,0	0/0:21,0:20:54.09:0,54,710	0/0:22,0:21:57.15:0,57,765	0/0:23,0:23:66.19:0,66,898	0/0:31,0:31:93.31:0,93,1300	0/0:26,0:26:75.25:0,75,1040	0/0:25,0:24:72.24:0,72,1000	0/0:13,0:13:36.12:0,36,504	0/0:48,0:45:99:0,126,1761	1/1:0,2:2:3.01:44,3,0	./.	./.	1/1:1,2:3:5.98:63,6,0	0/0:14,0:13:32.97:0,33,414	0/0:12,0:11:33.09:0,33,430	0/0:4,0:4:12.04:0,12,168
chr10	73249705	.	G	GT	238.33	PASS	AB=0.987;AC=7;AF=0.125;AN=56;BaseQRankSum=9.291;DP=759;FS=0.000;HRun=8;HaplotypeScore=137.0265;InbreedingCoeff=0.2960;MQ=69.46;MQ0=7;MQRankSum=-2.727;QD=1.56;ReadPosRankSum=-1.617;VQSLOD=-0.3589;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:16.67:0,17,52	0/0:17,0:17:48.03:0,48,439	0/0:35,0:25:25.24:0,25,314	0/0:30,0:25:23.40:0,23,253	0/0:21,0:21:54.02:0,54,494	0/0:27,0:27:72.01:0,72,650	0/0:28,1:29:25.40:0,25,487	0/0:34,0:34:83.90:0,84,754	0/0:15,0:15:45.02:0,45,412	0/1:29,0:29:17.80:18,0,28	0/1:22,0:21:24.89:25,0,28	0/1:35,1:36:1.74:25,0,2	0/0:28,0:28:4.66:0,5,5	0/0:26,0:26:69.03:0,69,631	0/0:33,0:32:84.02:0,84,762	0/0:29,0:29:81:0,81,727	0/0:37,0:37:70.26:0,70,873	0/0:15,0:15:0.30:0,0,13	0/0:22,0:20:48:0,48,436	0/0:47,0:47:99:0,129,1177	0/0:20,0:20:47.99:0,48,431	1/1:22,1:23:19.37:230,19,0	0/1:23,1:24:23.28:23,0,23	0/0:32,0:32:9.34:0,9,12	0/1:19,0:19:8.25:51,0,8	0/0:24,0:24:63.03:0,63,574	0/0:35,0:34:93.02:0,93,845	0/0:10,0:10:27.01:0,27,247
chr10	73249711	.	TTTG	T	6276.81	PASS	AB=0.535;AC=19;AF=0.339;AN=56;BaseQRankSum=17.718;DP=765;FS=5.442;HRun=0;HaplotypeScore=143.0437;InbreedingCoeff=0.9119;MQ=66.64;MQ0=7;MQRankSum=-2.971;QD=23.51;ReadPosRankSum=2.413;VQSLOD=4.7097;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:37:64.65:524,65,0	0/0:19,0:19:57.14:0,57,1002	0/0:35,0:20:32.57:0,33,465	0/0:35,0:26:27.39:0,27,445	0/0:20,0:20:60.15:0,60,1090	0/0:24,0:24:72.22:0,72,1421	0/0:26,0:26:75.60:0,76,1268	0/0:34,0:34:93.09:0,93,1534	0/0:17,0:17:51.13:0,51,930	1/1:32,0:32:54.64:505,55,0	1/1:22,0:21:13.24:262,13,0	1/1:2,32:34:60.20:943,60,0	1/1:0,30:30:72.25:1145,72,0	0/0:27,0:27:78.20:0,78,1415	0/0:32,0:31:93.20:0,93,1621	0/0:29,0:29:87.26:0,87,1626	0/0:37,0:37:99:0,106,1986	1/1:14,0:14:10.12:55,10,0	0/0:23,0:21:60.14:0,60,1017	0/0:49,0:49:99:0,141,2659	0/0:19,0:19:48.11:0,48,898	1/1:2,20:22:60.10:804,60,0	0/1:3,20:23:13.15:648,0,13	1/1:2,28:30:62.44:1008,62,0	1/1:21,0:21:19.12:383,19,0	0/0:26,0:26:78.17:0,78,1342	0/0:36,0:35:99:0,99,1890	0/0:10,0:10:30.10:0,30,639
chr10	73249712	.	TTGTTTG	T	2372.09	PASS	AB=0.967;AC=8;AF=0.143;AN=56;BaseQRankSum=10.712;DP=766;FS=13.458;HRun=0;HaplotypeScore=197.7639;InbreedingCoeff=0.7390;MQ=65.62;MQ0=8;MQRankSum=-8.565;QD=18.83;ReadPosRankSum=-3.733;VQSLOD=1.4160;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,34:36:69.16:1535,69,0	0/0:19,0:19:57.19:0,57,1672	0/0:35,0:20:38.19:0,38,723	0/0:35,0:24:32.45:0,32,748	0/0:20,0:20:60.20:0,60,1751	0/0:24,0:24:72.24:0,72,2298	0/0:26,0:26:78.23:0,78,2104	0/0:36,0:36:99:0,101,2541	0/0:17,0:17:51.17:0,51,1497	1/1:31,0:31:66.33:479,66,0	0/1:22,0:21:3.63:141,0,4	0/0:33,0:33:57.39:0,57,303	0/0:30,0:30:68.85:0,69,358	0/0:29,0:29:84.25:0,84,2386	0/0:32,0:31:96.30:0,96,2710	0/0:29,0:29:87.29:0,87,2603	0/0:37,0:37:99:0,111,3287	0/1:13,0:14:25.70:26,0,78	0/0:24,0:22:63.20:0,63,1657	0/0:47,0:47:99:0,141,4306	0/0:20,0:20:51.14:0,51,1432	0/0:22,0:22:11.72:0,12,192	0/0:22,0:22:40.31:0,40,349	0/0:30,0:30:63.24:0,63,329	1/1:21,0:21:10.47:342,10,0	0/0:27,0:27:81.26:0,81,2257	0/0:36,0:35:99:0,102,3068	0/0:10,0:10:30.10:0,30,1036
chr10	73249713	.	TG	T	3151.10	PASS	AB=0.971;AC=21;AF=0.375;AN=56;BaseQRankSum=19.307;DP=767;FS=2.647;HRun=1;HaplotypeScore=125.1219;InbreedingCoeff=0.9127;MQ=64.64;MQ0=8;MQRankSum=-6.651;QD=10.72;ReadPosRankSum=1.966;VQSLOD=1.9302;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:36:63.29:335,63,0	0/0:19,0:19:57.15:0,57,714	0/1:32,1:18:12.06:12,0,391	0/0:36,2:25:23.45:0,23,427	0/0:20,0:20:60.16:0,60,770	0/0:24,0:24:72.24:0,72,967	0/0:26,0:26:77.98:0,78,907	0/0:37,0:37:92.69:0,93,1241	0/0:17,0:17:51.14:0,51,653	1/1:17,11:31:75.15:578,75,0	1/1:12,8:20:42.26:329,42,0	1/1:33,0:33:56.24:305,56,0	1/1:30,0:30:69.73:391,70,0	0/0:28,0:28:84.18:0,84,1030	0/0:32,0:31:96.21:0,96,1183	0/0:29,0:29:87.26:0,87,1129	0/0:37,0:37:99:0,108,1370	1/1:2,13:15:15.03:238,15,0	0/0:23,0:21:63.16:0,63,778	0/0:48,0:48:99:0,141,1820	0/0:21,0:21:54.12:0,54,677	1/1:21,0:21:45.86:234,46,0	1/1:22,0:22:7.12:212,7,0	1/1:29,0:29:58.99:335,59,0	1/1:11,10:21:46.43:400,46,0	0/0:30,0:30:90.18:0,90,1065	0/0:34,0:33:99:0,102,1321	0/0:10,0:10:30.10:0,30,407
chr10	73249717	.	TG	T	1473.87	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.684;DP=768;FS=4.338;HRun=1;HaplotypeScore=131.7155;InbreedingCoeff=0.9881;MQ=63.67;MQ0=9;MQRankSum=-9.431;QD=11.98;ReadPosRankSum=-3.400;VQSLOD=1.1111;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:36:28.24:256,28,0	0/0:21,0:21:63.17:0,63,893	0/0:34,1:19:18.97:0,19,475	0/0:35,0:21:20.01:0,20,445	0/0:20,0:20:57.17:0,57,841	0/0:24,0:24:72.23:0,72,1076	0/0:25,0:25:75.13:0,75,1094	0/0:38,0:38:95.87:0,96,1521	0/0:17,0:17:51.15:0,51,755	1/1:16,11:27:63.93:469,64,0	1/1:13,7:19:36.19:293,36,0	0/0:35,0:35:56.34:0,56,412	0/0:31,0:31:68.01:0,68,423	0/0:28,0:28:84.24:0,84,1219	0/0:29,0:28:87.30:0,87,1322	0/0:29,0:29:87.26:0,87,1281	0/0:36,0:36:99:0,108,1593	1/1:10,7:17:11.07:233,11,0	0/0:25,0:23:69.20:0,69,1002	0/0:48,0:48:99:0,144,2133	0/0:19,0:19:54.18:0,54,817	0/0:24,0:24:61.93:0,62,433	0/0:23,0:23:49.71:0,50,346	0/0:29,0:29:67.77:0,68,456	1/1:11,10:21:44:396,44,0	0/0:30,0:30:90.29:0,90,1331	0/0:34,0:33:99:0,102,1552	0/0:10,0:10:30.10:0,30,459
chr10	73249720	.	TTG	T	849.92	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=9.653;DP=780;FS=13.474;HRun=0;HaplotypeScore=148.6980;InbreedingCoeff=0.8040;MQ=62.71;MQ0=9;MQRankSum=-8.275;QD=10.24;ReadPosRankSum=-1.701;VQSLOD=2.3497;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:38:67.68:0,68,353	0/0:20,0:20:60.19:0,60,1060	0/0:31,2:18:27.43:0,27,523	0/0:34,0:21:6.67:0,7,497	0/0:22,0:22:66.22:0,66,1157	0/0:24,0:24:72.23:0,72,1304	0/0:24,0:24:72.24:0,72,1323	0/0:41,0:41:99:0,114,1853	0/0:16,0:16:48.16:0,48,895	1/1:18,6:24:52.94:400,53,0	1/1:14,5:18:17.40:208,17,0	0/0:37,0:37:69.97:0,70,697	0/0:30,0:30:75.06:0,75,715	0/0:26,0:26:78.27:0,78,1447	0/0:31,0:30:90.29:0,90,1610	0/0:28,0:28:84.24:0,84,1481	0/0:35,0:35:99:0,105,1938	0/1:17,0:17:24.55:25,0,169	0/0:28,0:25:72.23:0,72,1220	0/0:49,0:49:99:0,148,2680	0/0:20,0:20:57.19:0,57,1015	0/0:24,0:24:60.08:0,60,637	0/0:24,0:24:59.75:0,60,610	0/0:30,0:30:33.92:0,34,624	1/1:17,6:23:15.85:364,16,0	0/0:32,0:32:90.30:0,90,1629	0/0:36,0:35:99:0,108,1933	0/0:10,0:10:30.10:0,30,565
chr10	73249721	.	TG	T	792.28	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=9.422;DP=778;FS=8.192;HRun=1;HaplotypeScore=135.2209;InbreedingCoeff=0.8169;MQ=61.97;MQ0=9;MQRankSum=-9.224;QD=10.03;ReadPosRankSum=-1.518;VQSLOD=0.4971;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:39:67.82:0,68,374	0/0:21,0:21:63.18:0,63,910	0/0:35,0:18:36.18:0,36,490	0/0:36,0:22:9.94:0,10,421	0/0:22,0:22:66.20:0,66,952	0/0:24,0:24:72.23:0,72,1076	0/0:24,0:24:72.11:0,72,1067	0/0:40,0:40:99:0,114,1602	0/0:16,0:16:48.16:0,48,732	1/1:19,5:24:53.05:373,53,0	1/1:15,2:16:10.58:196,11,0	0/0:36,0:36:68.04:0,68,760	0/0:30,0:30:75.20:0,75,848	0/0:27,0:27:81.26:0,81,1211	0/0:30,0:29:90.27:0,90,1327	0/0:28,0:28:84.24:0,84,1217	0/0:35,0:35:99:0,105,1586	0/1:16,0:16:9.55:10,0,182	0/0:28,0:25:71.75:0,72,992	0/0:49,0:49:99:0,147,2225	0/0:21,0:21:60.15:0,60,843	0/0:24,0:24:60:0,60,677	0/0:24,0:24:59.67:0,60,667	0/0:30,0:30:55.89:0,56,764	1/1:18,4:22:14.89:355,15,0	0/0:30,0:30:90.29:0,90,1333	0/0:36,0:35:99:0,108,1607	0/0:10,0:10:30.10:0,30,459
chr10	73249808	.	CAGAG	C	3687.38	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.230;DP=786;FS=8.120;HRun=0;HaplotypeScore=138.0134;InbreedingCoeff=0.9571;MQ=69.27;MQ0=0;MQRankSum=-0.838;QD=45.52;ReadPosRankSum=0.797;VQSLOD=4.3399;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,108,2874	0/0:13,0:13:33.09:0,33,763	0/0:12,0:12:20.63:0,21,391	0/0:15,0:15:5.32:0,5,407	0/0:41,0:41:99:0,120,3175	0/0:23,0:23:69.21:0,69,1748	0/0:25,0:25:72.25:0,72,1922	0/0:29,0:29:81.26:0,81,1945	0/0:22,0:22:60.19:0,60,1531	1/1:1,22:23:63.19:1129,63,0	1/1:3,20:23:57.20:1081,57,0	0/0:31,0:31:90.30:0,90,2267	0/0:25,0:25:63.22:0,63,1661	0/0:33,0:33:93.28:0,93,2277	0/0:33,0:33:93.31:0,93,2411	0/0:25,0:25:75.26:0,75,1929	0/0:22,0:22:60.19:0,60,1561	0/0:22,0:22:60.21:0,60,1550	0/0:27,0:27:78.22:0,78,1860	0/0:45,0:45:99:0,126,3150	0/0:35,0:35:99:0,105,2678	0/0:34,0:34:99:0,102,2636	0/0:28,0:28:84.22:0,84,2102	0/0:29,0:29:87.30:0,87,2305	1/1:1,34:35:78.27:1478,78,0	0/0:43,0:43:99:0,120,2983	0/0:40,0:39:99:0,117,2932	0/0:10,0:10:27.54:0,28,637
chr10	73250307	.	G	GT	1208.03	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.449;DP=518;FS=0.613;HRun=8;HaplotypeScore=44.1377;InbreedingCoeff=0.8920;MQ=58.44;MQ0=1;MQRankSum=0.950;QD=23.69;ReadPosRankSum=-0.061;VQSLOD=3.8269;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:90.02:0,90,819	0/0:9,0:9:27.01:0,27,247	0/0:14,0:6:17.80:0,18,149	0/0:4,0:3:3:0,3,27	0/0:27,0:27:63.02:0,63,577	0/0:15,0:15:45.02:0,45,412	0/0:13,0:13:29.97:0,30,263	0/0:18,0:18:36:0,36,327	0/0:14,0:14:39.02:0,39,357	1/1:1,17:14:36.11:415,36,0	1/1:2,19:18:54.16:623,54,0	0/0:17,0:15:33.01:0,33,302	0/0:18,0:16:39:0,39,349	0/0:10,0:10:29.99:0,30,268	0/0:27,0:27:69.02:0,69,628	0/0:11,0:11:30.01:0,30,275	0/0:39,0:39:99:0,101,912	0/0:32,0:32:90.04:0,90,824	0/0:20,0:19:54.03:0,54,494	0/0:30,0:30:78.02:0,78,709	0/0:15,0:15:33.01:0,33,302	0/0:12,0:9:24.01:0,24,219	0/0:21,0:18:51.03:0,51,466	0/0:21,0:20:45.01:0,45,412	1/1:3,9:12:27.08:312,27,0	0/0:14,1:15:4.36:0,4,295	0/0:13,0:13:33.02:0,33,302	0/0:15,0:15:44.77:0,45,396
chr10	73250534	.	T	TTTCTA	278.81	PASS	AB=1.000;AC=9;AF=0.196;AN=46;BaseQRankSum=4.934;DP=571;FS=1.404;HRun=0;HaplotypeScore=85.8959;InbreedingCoeff=0.6644;MQ=62.52;MQ0=48;MQRankSum=-3.802;QD=3.06;ReadPosRankSum=-1.567;VQSLOD=1.3572;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:3:2:73,2,0	0/0:7,0:7:18.06:0,18,376	0/0:18,0:16:25.12:0,25,745	0/0:16,0:14:36.12:0,36,644	0/0:30,0:30:84.27:0,84,1705	0/0:24,2:26:69.22:0,69,1369	0/0:11,0:11:27.09:0,27,564	0/0:32,0:29:81.24:0,81,1495	0/0:26,1:27:72.25:0,72,1511	1/1:6,0:6:8.98:164,9,0	./.	1/1:5,0:5:3.01:68,3,0	./.	0/0:16,1:17:48.16:0,48,972	0/0:30,0:30:87.30:0,87,1767	0/0:21,0:21:60.19:0,60,1222	0/0:30,2:31:87.30:0,87,1765	0/1:29,0:29:26.84:27,0,1512	0/0:33,1:34:93.30:0,93,1858	0/0:31,0:31:84.27:0,84,1724	0/0:18,0:18:54.19:0,54,1134	./.	1/1:3,0:1:3.01:74,3,0	./.	./.	0/0:23,2:25:66.23:0,66,1365	0/0:30,0:28:81.28:0,81,1678	0/0:11,0:11:30.09:0,30,569
chr10	73251665	.	AGAT	A	4372.46	PASS	AB=0.944;AC=11;AF=0.196;AN=56;BaseQRankSum=12.580;DP=638;FS=0.000;HRun=0;HaplotypeScore=96.0682;InbreedingCoeff=0.9316;MQ=83.63;MQ0=0;MQRankSum=-4.500;QD=33.90;ReadPosRankSum=2.747;VQSLOD=4.8893;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.32:0,96,2080	0/0:13,0:13:36.12:0,36,786	0/0:24,0:24:60.19:0,60,1191	0/1:16,1:17:1.43:1,0,778	0/0:28,0:28:78.27:0,78,1732	0/0:12,0:12:36.12:0,36,801	0/0:22,0:22:66.23:0,66,1455	0/0:34,0:34:93.31:0,93,1994	0/0:25,0:25:72.25:0,72,1607	0/0:25,0:25:69.24:0,69,1533	0/0:20,0:20:60.19:0,60,1298	1/1:1,24:25:69.24:1126,69,0	1/1:0,12:12:24.08:390,24,0	0/0:27,0:27:78.27:0,78,1700	0/0:28,0:28:84.26:0,84,1788	0/0:24,0:24:72.25:0,72,1589	0/0:23,0:23:69.24:0,69,1538	0/0:24,0:24:69.19:0,69,1470	0/0:19,0:19:54.19:0,54,1205	0/0:32,0:32:93.32:0,93,2030	0/0:10,0:10:30.09:0,30,608	1/1:3,23:26:66.23:1075,66,0	1/1:1,25:26:56.97:898,57,0	1/1:0,23:23:54.18:881,54,0	0/0:27,0:27:72.25:0,72,1605	0/0:23,0:23:69.23:0,69,1489	0/0:24,0:24:60.21:0,60,1340	0/0:12,0:12:36.12:0,36,803
chr10	73252702	.	T	TCTTCCTTCCTTC	850.70	PASS	AC=12;AF=0.250;AN=48;BaseQRankSum=3.419;DP=643;FS=1.284;HRun=0;HaplotypeScore=227.3869;InbreedingCoeff=0.7516;MQ=62.78;MQ0=4;MQRankSum=-5.907;QD=5.95;ReadPosRankSum=-5.536;VQSLOD=0.7967;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:28:6.02:152,6,0	1/1:7,0:7:3.44:21,3,0	./.	./.	0/0:26,0:26:22.54:0,23,696	0/0:25,0:25:15.05:0,15,355	0/0:32,0:32:13.27:0,13,334	./.	0/0:23,0:23:42.13:0,42,1170	0/0:20,0:20:6.02:0,6,188	0/0:19,0:19:10.28:0,10,225	./.	1/1:20,0:24:6.02:133,6,0	0/0:19,0:19:21.05:0,21,534	0/0:28,0:28:24.08:0,24,792	0/0:18,0:21:6.45:0,6,207	0/0:25,0:25:19.85:0,20,490	0/0:16,0:22:6.12:0,6,18	0/0:23,0:22:18.06:0,18,463	0/0:30,0:31:18.74:0,19,475	0/0:38,0:38:33.77:0,34,1072	1/1:27,2:36:10.39:391,10,0	1/1:16,0:20:3.01:77,3,0	1/1:24,1:27:6.02:223,6,0	0/0:24,0:24:14.53:0,15,340	0/0:25,0:25:21.07:0,21,592	0/0:20,0:20:23.30:0,23,554	0/0:13,0:13:21.07:0,21,602
chr10	73254176	.	TG	T	4401.91	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=14.209;DP=660;FS=0.000;HRun=2;HaplotypeScore=83.0187;InbreedingCoeff=0.9892;MQ=81.27;MQ0=0;MQRankSum=-2.625;QD=37.62;ReadPosRankSum=3.637;VQSLOD=5.3335;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:34:99:1285,99,0	0/0:6,0:6:18.02:0,18,245	0/0:25,0:25:72.22:0,72,1042	0/0:13,0:13:33.11:0,33,477	0/0:20,0:20:60.20:0,60,899	0/0:22,0:22:66.22:0,66,989	0/0:18,0:18:54.17:0,54,791	0/0:39,0:39:99:0,111,1572	0/0:21,0:21:63.21:0,63,944	1/1:0,29:29:87.28:1130,87,0	1/1:0,25:25:75.24:974,75,0	0/0:26,0:26:72.24:0,72,1078	0/0:29,0:29:84.28:0,84,1258	0/0:19,0:19:54.18:0,54,809	0/0:33,0:33:99:0,99,1483	0/0:24,0:24:66.22:0,66,989	0/0:30,0:30:87.29:0,87,1300	0/0:17,0:17:51.15:0,51,737	0/0:20,0:20:60.19:0,60,880	0/0:21,0:21:63.21:0,63,939	0/0:24,0:24:69.22:0,69,1013	0/0:17,0:17:51.17:0,51,764	0/0:25,0:25:72.24:0,72,1077	0/0:18,0:18:51.17:0,51,763	1/1:0,29:29:78.25:1013,78,0	0/0:28,2:30:12.37:0,12,1181	0/0:38,0:38:99:0,108,1555	0/0:8,0:8:24.08:0,24,360
chr10	73254471	.	TACACACACACACACAC	T	1069.17	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=5.271;DP=510;FS=15.017;HRun=0;HaplotypeScore=192.9821;InbreedingCoeff=0.5992;MQ=66.48;MQ0=17;MQRankSum=-2.820;QD=12.15;ReadPosRankSum=0.813;VQSLOD=1.6437;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:10.99:11,0,171	0/0:6,0:6:6.02:0,6,367	0/0:25,0:18:3.01:0,3,43	./.	0/0:15,0:15:30.10:0,30,1570	0/0:16,0:17:21.07:0,21,1253	0/0:23,0:22:18.06:0,18,784	0/0:21,0:20:18.06:0,18,560	0/0:15,0:16:27.09:0,27,1306	1/1:20,6:24:5.78:308,6,0	1/1:12,8:19:8.99:245,9,0	0/0:14,0:14:12.04:0,12,259	0/0:20,0:20:24.06:0,24,653	0/0:11,0:11:15.52:0,16,979	0/0:16,0:16:27.09:0,27,1868	0/0:11,0:11:12.04:0,12,906	0/0:20,0:17:30.10:0,30,1638	0/0:20,0:20:33.58:0,34,1387	0/0:11,0:11:11.07:0,11,626	0/0:22,0:21:33.11:0,33,1760	0/0:36,0:34:57.17:0,57,2807	0/0:12,0:12:18.06:0,18,439	0/0:8,0:8:3.01:0,3,88	0/0:22,0:21:5.99:0,6,172	1/1:10,9:19:15.05:634,15,0	0/0:20,0:20:42.14:0,42,2180	0/0:20,0:20:24.05:0,24,1185	0/0:5,0:5:9.03:0,9,591
chr10	73254515	.	CACACACACACTT	C	390.90	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=4.914;DP=548;FS=16.373;HRun=0;HaplotypeScore=166.5431;InbreedingCoeff=0.2534;MQ=59.52;MQ0=20;MQRankSum=-4.519;QD=3.13;ReadPosRankSum=1.555;VQSLOD=1.7033;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:2.79:0,3,16	0/0:3,0:3:6.48:0,6,195	0/0:19,0:12:23.97:0,24,467	0/0:21,0:16:33.57:0,34,709	0/0:22,0:20:45.15:0,45,1551	0/0:30,0:29:84.29:0,84,2115	0/0:27,0:27:69.22:0,69,1546	0/0:25,0:22:58.93:0,59,988	0/0:23,0:22:43.69:0,44,1012	0/1:23,0:20:50.72:51,0,666	0/1:18,0:17:27.72:28,0,368	1/1:9,0:9:6.01:74,6,0	0/1:14,0:14:13.97:50,0,14	0/0:14,0:14:38.94:0,39,1181	0/0:21,0:20:57.19:0,57,1767	0/0:12,0:12:33.11:0,33,1498	0/0:29,0:26:66.70:0,67,2004	0/0:28,0:27:75.25:0,75,1351	0/0:15,0:14:38.25:0,38,841	0/0:19,0:17:45.09:0,45,1245	0/0:51,0:48:99:0,114,3122	1/1:11,0:11:3:25,3,0	1/1:3,10:13:1.68:23,2,0	0/1:17,0:16:46.97:91,0,47	0/1:20,0:20:99:193,0,365	0/0:26,0:26:63.20:0,63,1672	0/0:15,0:15:30.35:0,30,923	0/0:6,0:6:15.94:0,16,451
chr10	73254517	.	CACACACACTT	C	203.78	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=6.542;DP=532;FS=10.289;HRun=0;HaplotypeScore=143.4515;InbreedingCoeff=0.3101;MQ=60.18;MQ0=20;MQRankSum=-4.808;QD=2.32;ReadPosRankSum=2.164;VQSLOD=2.3520;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:2.84:0,3,14	0/0:3,0:3:3.48:0,3,144	0/0:19,0:12:23.97:0,24,467	0/0:21,0:16:33.10:0,33,709	0/0:22,0:20:48.16:0,48,1350	0/0:30,0:29:84.29:0,84,1879	0/0:27,0:27:66.22:0,66,1345	0/0:25,0:22:57.18:0,57,978	0/0:22,0:21:41.36:0,41,774	0/1:23,0:20:22.76:23,0,666	0/0:20,0:19:0.17:0,0,468	1/1:9,0:9:3.40:18,3,0	1/1:5,7:12:3.01:100,3,0	0/0:14,0:14:38.95:0,39,949	0/0:22,0:21:60.20:0,60,1515	0/0:12,0:12:33.11:0,33,1289	0/0:27,0:24:69.24:0,69,1761	0/0:28,0:27:69.17:0,69,1026	0/0:15,0:14:37.89:0,38,733	0/0:18,0:16:39.07:0,39,915	0/0:48,0:45:99:0,114,2611	1/1:9,0:9:0.47:1,0,0	0/0:11,0:11:0.26:0,0,1	0/1:14,0:14:23.79:59,0,24	0/1:20,0:20:99:123,0,365	0/0:22,0:22:57.19:0,57,1289	0/0:15,0:15:30.59:0,31,712	0/0:6,0:6:15.94:0,16,370
chr10	73255245	.	GA	G	630.64	PASS	AB=0.955;AC=7;AF=0.125;AN=56;BaseQRankSum=4.452;DP=596;FS=20.265;HRun=13;HaplotypeScore=87.2133;InbreedingCoeff=0.6503;MQ=68.98;MQ0=2;MQRankSum=1.409;QD=7.51;ReadPosRankSum=2.028;VQSLOD=0.8754;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:67.70:0,68,633	0/0:6,0:6:11.97:0,12,106	0/0:14,0:11:5.45:0,5,122	0/0:16,0:15:19.51:0,20,163	0/0:43,3:47:76.97:0,77,848	0/0:15,0:14:41.99:0,42,396	0/0:24,3:28:3.16:0,3,485	0/0:34,0:34:55.49:0,55,642	0/0:23,1:25:35:0,35,482	1/1:3,18:22:53.68:394,54,0	1/1:6,16:22:28.65:196,29,0	0/0:15,0:15:20.66:0,21,97	0/0:16,0:17:18.52:0,19,103	0/0:11,0:11:24.04:0,24,233	0/0:25,0:25:63.04:0,63,591	0/0:17,0:20:50.60:0,51,476	0/0:27,0:27:65.86:0,66,606	0/0:19,0:19:17.80:0,18,101	0/1:20,1:21:3.78:4,0,281	0/0:27,0:29:65.88:0,66,616	0/0:23,2:27:10.81:0,11,389	0/0:10,0:10:11.37:0,11,64	0/0:20,0:20:15.67:0,16,79	0/0:11,0:11:5.68:0,6,28	1/1:7,11:18:0.69:168,1,0	0/0:17,0:18:21.64:0,22,327	0/0:29,1:29:42.39:0,42,545	0/0:10,0:10:29.99:0,30,267
chr10	73255257	.	A	AAAAAC	2639.19	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=5.367;DP=594;FS=15.642;HRun=0;HaplotypeScore=129.6508;InbreedingCoeff=0.7926;MQ=71.05;MQ0=2;MQRankSum=-4.198;QD=15.80;ReadPosRankSum=-3.629;VQSLOD=1.7004;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:40:17.36:481,0,17	0/0:5,0:5:11.95:0,12,182	0/0:15,0:12:29.93:0,30,355	0/0:17,0:16:38.71:0,39,405	0/0:43,0:43:99:0,104,1539	0/0:15,0:15:20.64:0,21,687	0/0:24,0:24:69.05:0,69,1066	0/0:31,0:31:87.66:0,88,1336	0/0:22,0:22:66.12:0,66,1011	0/0:24,0:24:69.17:0,69,831	0/0:24,0:23:53.69:0,54,538	1/1:3,4:16:25.64:540,26,0	1/1:3,9:13:27.07:650,27,0	0/0:11,0:11:26.99:0,27,441	0/0:25,0:25:72.14:0,72,1110	0/0:22,0:22:63.04:0,63,941	0/1:34,0:34:7.99:8,0,1152	1/1:4,2:21:21.07:431,21,0	0/0:21,0:21:55.11:0,55,684	0/0:32,0:32:90.13:0,90,1348	0/0:24,0:24:69.93:0,70,951	1/1:2,5:11:15.77:211,16,0	1/1:3,8:19:20.79:334,21,0	1/1:1,9:13:6.49:170,6,0	0/0:13,0:13:29.96:0,30,383	0/0:21,0:21:58.85:0,59,730	0/0:28,0:27:79.25:0,79,1127	0/0:10,0:10:26.97:0,27,387
chr10	73256153	.	CCTTGGACAAT	C	8132.91	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.387;DP=579;FS=19.224;HRun=0;HaplotypeScore=180.6739;InbreedingCoeff=0.9949;MQ=89.03;MQ0=0;MQRankSum=-13.923;QD=52.13;ReadPosRankSum=1.889;VQSLOD=3.3693;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,20:30:40.40:1304,40,0	0/0:16,0:16:27.09:0,27,1325	0/0:25,0:25:61.41:0,61,2289	0/0:24,0:24:59.01:0,59,2581	0/0:19,0:19:48.16:0,48,2079	0/0:32,0:31:81.26:0,81,3884	0/0:17,0:17:48.16:0,48,2363	0/0:27,0:27:51.17:0,51,2302	0/0:18,0:18:42.14:0,42,2046	1/1:3,10:13:27.09:847,27,0	1/1:4,12:16:27.09:842,27,0	1/1:5,16:21:45.15:1411,45,0	1/1:5,15:20:30.10:931,30,0	0/0:22,0:22:63.22:0,63,3084	0/0:18,0:18:42.14:0,42,2117	0/0:24,0:24:66.23:0,66,3311	0/0:37,0:37:99:0,99,4747	0/0:27,0:27:69.21:0,69,3106	0/0:22,0:22:57.20:0,57,2566	0/0:19,0:19:45.15:0,45,2130	0/0:25,0:25:60.19:0,60,2810	1/1:4,10:14:24.08:737,24,0	1/1:6,12:18:24.55:745,25,0	1/1:3,9:12:15.05:470,15,0	1/1:3,9:12:27.09:847,27,0	0/0:25,0:25:69.23:0,69,3246	0/0:19,0:19:51.18:0,51,2388	0/0:7,0:7:18.06:0,18,901
chr10	73256231	.	CAG	C	1053.19	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.209;DP=517;FS=6.543;HRun=0;HaplotypeScore=83.3404;InbreedingCoeff=0.9894;MQ=70.57;MQ0=0;MQRankSum=-1.181;QD=36.32;ReadPosRankSum=2.221;VQSLOD=5.7150;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:66.23:0,66,1196	0/0:6,0:6:18.06:0,18,337	0/0:23,0:23:66.20:0,66,1142	0/0:16,0:17:36.12:0,36,638	0/0:25,0:25:72.25:0,72,1331	0/0:21,0:21:48.16:0,48,898	0/0:19,0:19:48.16:0,48,899	0/0:22,0:22:63.22:0,63,1172	0/0:22,0:22:63.20:0,63,1141	0/0:19,0:19:57.20:0,57,1064	0/0:12,0:12:30.10:0,30,555	0/0:20,0:20:48.16:0,48,870	0/0:14,0:14:33.11:0,33,610	0/0:16,0:16:45.15:0,45,829	0/0:12,0:12:36.12:0,36,674	0/0:14,0:14:33.10:0,33,574	0/0:22,0:22:57.20:0,57,1067	1/1:1,28:29:78.26:1148,78,0	0/0:22,0:22:66.21:0,66,1205	0/0:16,0:16:48.16:0,48,895	0/0:27,0:27:78.25:0,78,1413	0/0:11,0:11:30.10:0,30,552	0/0:17,0:17:42.14:0,42,746	0/0:13,0:13:33.11:0,33,606	0/0:10,0:10:30.10:0,30,533	0/0:26,0:26:78.21:0,78,1423	0/0:16,0:16:42.14:0,42,785	0/0:13,0:13:39.13:0,39,729
chr10	73256375	.	ATCTT	A	2354.41	PASS	AB=0.823;AC=17;AF=0.304;AN=56;BaseQRankSum=10.907;DP=389;FS=0.551;HRun=0;HaplotypeScore=86.0686;InbreedingCoeff=-0.4408;MQ=72.62;MQ0=0;MQRankSum=-9.703;QD=8.66;ReadPosRankSum=-2.683;VQSLOD=2.0498;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,2:26:53.14:53,0,1824	0/1:10,1:12:66.67:67,0,822	0/0:14,0:13:39.10:0,39,1015	0/0:17,0:16:33.11:0,33,851	0/1:11,5:17:99:266,0,892	0/1:16,6:21:99:310,0,1305	0/1:13,2:15:80.36:80,0,1071	0/1:19,4:23:99:180,0,1339	0/1:11,2:13:85.07:85,0,914	0/1:10,0:13:62.94:63,0,818	0/1:10,0:13:61.82:62,0,818	0/0:8,0:8:21.07:0,21,599	0/0:9,0:9:27.09:0,27,745	0/0:6,0:6:18.06:0,18,515	0/1:12,3:15:99:142,0,983	0/1:4,3:7:99:167,0,322	0/1:11,1:12:32.73:33,0,743	0/0:6,0:6:18.06:0,18,502	0/0:17,0:17:51.16:0,51,1412	0/1:15,6:21:99:334,0,968	0/0:14,0:14:42.12:0,42,1138	0/0:8,0:8:16.10:0,16,593	0/0:12,0:12:19.61:0,20,925	0/0:6,0:6:11.94:0,12,320	0/1:11,1:18:99:232,0,890	0/1:15,5:21:99:264,0,1195	0/1:8,3:11:99:149,0,653	0/1:12,1:13:26.56:27,0,825
chr10	73257287	.	AAG	A	1945.25	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=9.820;DP=457;FS=0.914;HRun=0;HaplotypeScore=73.4528;InbreedingCoeff=0.6889;MQ=79.01;MQ0=2;MQRankSum=-0.019;QD=12.39;ReadPosRankSum=7.813;VQSLOD=3.0107;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:49.48:0,49,483	0/0:7,0:7:21.04:0,21,339	0/0:21,0:18:47.22:0,47,603	0/1:26,0:23:0.46:0,0,404	0/0:18,0:18:47.99:0,48,713	0/0:14,0:14:41.98:0,42,629	0/0:20,0:20:60.14:0,60,939	0/0:14,0:14:38.84:0,39,456	0/0:13,0:13:39.08:0,39,647	0/1:28,0:28:43.35:58,0,43	0/1:22,0:22:1.63:62,0,2	1/1:1,18:19:38.77:626,39,0	1/1:0,15:15:30.10:481,30,0	0/0:18,0:18:54.08:0,54,908	0/0:15,0:15:45.09:0,45,694	0/0:7,0:7:20.98:0,21,311	0/0:20,0:20:57.05:0,57,803	0/0:13,0:13:27.76:0,28,242	0/0:10,0:10:29.96:0,30,417	0/0:17,0:17:50.96:0,51,632	0/0:14,0:14:42.10:0,42,678	1/1:0,5:6:12.04:174,12,0	1/1:1,8:9:14.99:239,15,0	1/1:0,14:14:27.09:413,27,0	0/1:17,0:17:38.15:72,0,38	0/0:27,1:28:34.33:0,34,914	0/0:19,0:19:54.14:0,54,884	0/0:6,0:6:18.02:0,18,252
chr10	73257288	.	AGG	A	2605.36	PASS	AB=0.834;AC=18;AF=0.321;AN=56;BaseQRankSum=6.891;DP=464;FS=10.026;HRun=11;HaplotypeScore=72.0805;InbreedingCoeff=0.6925;MQ=78.27;MQ0=2;MQRankSum=0.726;QD=13.29;ReadPosRankSum=5.920;VQSLOD=0.8541;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:26:12.54:0,13,124	0/0:8,0:8:21.06:0,21,300	0/0:23,0:20:35.35:0,35,415	0/1:21,0:21:19.51:20,0,213	0/0:16,0:19:43.94:0,44,558	0/0:16,0:18:44.06:0,44,530	0/0:19,0:19:45.15:0,45,682	0/0:12,0:15:17.64:0,18,208	0/0:13,0:13:29.84:0,30,428	1/1:4,23:28:66.10:755,66,0	1/1:2,20:22:60.15:638,60,0	1/1:19,0:19:38.43:292,38,0	1/1:15,0:15:29.89:233,30,0	0/0:17,0:18:44.64:0,45,653	0/0:15,0:15:27.09:0,27,416	0/0:7,0:8:17.53:0,18,219	0/0:18,0:20:38.57:0,39,512	0/1:2,1:12:3.45:3,0,95	0/0:7,0:10:26.06:0,26,321	0/0:16,0:17:32.60:0,33,463	0/0:14,0:14:30.10:0,30,462	1/1:6,0:6:11.90:86,12,0	0/1:10,0:10:7.36:100,0,7	1/1:15,0:13:26.86:207,27,0	1/1:4,13:17:41.77:426,42,0	0/1:25,2:28:45.10:45,0,519	0/0:19,0:19:39.13:0,39,599	0/0:6,0:6:12.01:0,12,141
chr10	73257607	.	CA	C	1761.71	PASS	AB=0.714;AC=19;AF=0.339;AN=56;BaseQRankSum=7.976;DP=430;FS=4.982;HRun=12;HaplotypeScore=56.4287;InbreedingCoeff=0.7017;MQ=70.36;MQ0=1;MQRankSum=-0.348;QD=12.41;ReadPosRankSum=0.980;VQSLOD=3.4691;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,11:15:33.75:258,34,0	0/1:1,3:4:18.48:58,0,18	0/0:9,0:8:3.01:0,3,30	0/1:9,0:8:0.19:0,0,46	0/0:20,0:21:53.88:0,54,520	0/0:24,0:26:61.33:0,61,610	0/0:11,0:11:27.05:0,27,274	0/0:18,0:19:42.08:0,42,422	0/0:16,0:17:38.89:0,39,369	1/1:9,16:25:58.56:444,59,0	1/1:14,18:32:26.69:347,27,0	1/1:3,5:8:14.94:116,15,0	1/1:2,6:8:17.91:139,18,0	0/0:10,0:10:21.04:0,21,212	0/0:11,0:11:23.99:0,24,227	0/0:14,0:15:38.89:0,39,368	0/0:31,0:31:67.18:0,67,733	0/0:16,0:17:32.80:0,33,284	0/0:16,0:18:35.83:0,36,429	0/0:15,0:15:24.05:0,24,244	0/0:9,1:10:0.79:0,1,183	0/1:2,6:8:12.51:98,0,13	1/1:5,8:13:26.86:209,27,0	1/1:2,6:8:1.30:120,1,0	1/1:4,7:12:22.92:168,23,0	0/0:15,1:16:39.07:0,39,391	0/0:27,0:27:66.09:0,66,647	0/0:15,0:15:27.05:0,27,270
chr10	73257641	.	CA	C	693.21	PASS	AB=0.878;AC=17;AF=0.304;AN=56;BaseQRankSum=3.911;DP=429;FS=3.956;HRun=14;HaplotypeScore=59.8791;InbreedingCoeff=0.3487;MQ=70.37;MQ0=1;MQRankSum=-0.749;QD=4.47;ReadPosRankSum=0.785;VQSLOD=1.3669;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:14:25.82:0,26,143	0/0:5,0:5:9.01:0,9,84	0/1:13,0:10:20.59:21,0,92	0/0:11,1:11:5.99:0,6,50	0/0:20,1:21:18.46:0,18,314	0/0:23,0:23:24.89:0,25,366	0/0:6,1:9:0.25:0,0,125	0/1:27,4:31:15.16:15,0,439	0/0:13,1:14:6.41:0,6,191	0/0:17,0:24:40.71:0,41,269	0/0:12,0:24:54.68:0,55,319	1/1:8,2:10:14.72:101,15,0	1/1:3,8:12:28.76:190,29,0	0/1:9,2:11:26.03:26,0,47	0/0:11,1:13:7.52:0,8,188	0/1:8,2:10:17.25:17,0,129	0/0:25,1:26:30.41:0,30,403	0/1:10,2:12:34.40:34,0,136	0/0:14,0:14:23.83:0,24,198	0/0:16,2:18:15.31:0,15,260	0/1:7,2:10:20.46:20,0,92	1/1:4,8:13:22.81:150,23,0	1/1:3,7:14:31.95:188,32,0	1/1:4,6:11:16.88:109,17,0	0/0:5,0:8:17.42:0,17,109	0/0:19,1:21:15.33:0,15,261	0/0:27,1:28:33.46:0,33,440	0/1:6,1:8:3.25:3,0,86
chr10	73258159	.	AAAAC	A	4081.77	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.462;DP=759;FS=2.579;HRun=0;HaplotypeScore=142.6252;InbreedingCoeff=0.9862;MQ=61.14;MQ0=4;MQRankSum=0.575;QD=32.39;ReadPosRankSum=2.573;VQSLOD=3.9384;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:32:62.57:0,63,995	0/0:14,0:14:30.09:0,30,664	0/0:34,0:20:21.04:0,21,423	0/0:31,0:19:9.55:0,10,308	0/0:48,0:48:99:0,114,2523	0/0:22,0:22:54.18:0,54,1237	0/0:20,0:21:51.15:0,51,1062	0/0:22,0:22:33.11:0,33,723	0/0:24,0:24:57.18:0,57,1282	0/0:11,0:38:96.25:0,96,1530	0/0:7,0:29:62.74:0,63,894	1/1:4,23:27:60.21:991,60,0	1/1:6,21:27:51.17:843,51,0	0/0:26,0:26:63.22:0,63,1536	0/0:31,0:31:66.23:0,66,1591	0/0:17,0:17:45.14:0,45,1024	0/0:38,0:38:93.29:0,93,2176	0/0:34,0:34:89.55:0,90,1946	0/0:27,0:27:57.16:0,57,1261	0/0:29,0:29:63.20:0,63,1483	0/0:16,0:16:30.02:0,30,669	1/1:4,11:15:33.06:494,33,0	1/1:11,22:33:60.09:961,60,0	1/1:1,23:24:48.16:792,48,0	0/0:3,0:20:45.14:0,45,760	0/0:32,0:32:72.23:0,72,1626	0/0:39,0:39:93.31:0,93,2180	0/0:9,0:9:24.08:0,24,507
chr10	73259003	.	CT	C	320.26	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.135;DP=658;FS=0.000;HRun=2;HaplotypeScore=88.9982;InbreedingCoeff=0.9954;MQ=75.03;MQ0=0;MQRankSum=-1.584;QD=26.69;ReadPosRankSum=-2.039;VQSLOD=2.7292;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,157,2311	0/0:15,0:15:42.14:0,42,630	0/0:13,0:13:28.87:0,29,365	0/0:17,0:17:37.18:0,37,632	0/0:23,0:23:69.22:0,69,1013	0/0:26,0:26:78.26:0,78,1168	0/0:23,0:23:69.23:0,69,1034	0/0:25,0:25:75.25:0,75,1107	0/0:20,0:20:60.19:0,60,878	0/0:29,0:29:87.23:0,87,1226	0/0:20,0:20:57.15:0,57,827	0/0:21,0:21:59.12:0,59,411	0/0:20,0:20:26.59:0,27,299	0/0:21,0:21:63.20:0,63,926	0/0:31,0:31:93.30:0,93,1369	0/0:22,0:22:66.22:0,66,989	0/0:33,0:33:99:0,99,1461	1/1:0,12:12:33.07:415,33,0	0/0:21,0:21:60.20:0,60,899	0/0:25,0:25:75.25:0,75,1123	0/0:50,0:50:99:0,141,2094	0/0:25,0:25:24.42:0,24,428	0/0:24,0:24:43.20:0,43,407	0/0:20,0:20:50.28:0,50,330	0/0:17,0:17:48.16:0,48,701	0/0:21,0:21:60.19:0,60,881	0/0:22,0:22:66.22:0,66,971	0/0:10,0:10:30.10:0,30,450
chr10	73259042	.	AGACT	A	5304.12	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.387;DP=666;FS=8.109;HRun=0;HaplotypeScore=124.9874;InbreedingCoeff=0.9960;MQ=69.18;MQ0=5;MQRankSum=-1.387;QD=28.06;ReadPosRankSum=3.721;VQSLOD=4.2783;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:45:90.31:0,90,2176	0/0:15,0:15:36.10:0,36,824	0/0:19,0:16:15.52:0,16,343	0/0:32,0:26:27.09:0,27,552	0/0:21,0:21:30.10:0,30,699	0/0:24,0:24:48.16:0,48,1168	0/0:15,0:15:30.10:0,30,730	0/0:32,0:32:48.16:0,48,1156	0/0:26,0:26:57.20:0,57,1343	1/1:6,17:23:51.16:803,51,0	1/1:11,14:25:30.10:489,30,0	1/1:9,18:26:39.09:637,39,0	1/1:3,19:21:48.16:784,48,0	0/0:22,0:22:45.15:0,45,1070	0/0:26,0:26:69.24:0,69,1671	0/0:18,0:18:33.10:0,33,755	0/0:32,0:32:69.24:0,69,1646	1/1:6,7:13:27.09:441,27,0	0/0:22,0:22:21.07:0,21,505	0/0:28,0:28:63.22:0,63,1515	0/0:42,0:42:81.28:0,81,1955	1/1:10,8:18:24.08:392,24,0	1/1:11,17:27:33.11:534,33,0	1/1:1,14:15:30.10:490,30,0	1/1:3,15:18:45.15:735,45,0	0/0:20,0:19:39.13:0,39,942	0/0:26,0:26:63.22:0,63,1512	0/0:11,0:11:33.11:0,33,803
chr10	73259333	.	T	TAAA	3069.62	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-2.873;DP=565;FS=3.776;HRun=11;HaplotypeScore=81.8738;InbreedingCoeff=0.9677;MQ=74.20;MQ0=0;MQRankSum=1.126;QD=31.01;ReadPosRankSum=-1.597;VQSLOD=2.9222;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:66.04:0,66,771	0/0:6,0:6:17.95:0,18,192	0/0:11,0:11:6.51:0,7,54	0/0:13,0:12:11.79:0,12,118	0/0:26,0:26:63.10:0,63,736	0/0:24,0:24:23.42:0,23,693	0/0:17,0:17:48.14:0,48,561	0/0:26,0:26:63.07:0,63,727	0/0:18,0:18:42.05:0,42,491	0/0:19,0:19:54.12:0,54,630	0/0:19,0:20:42:0,42,474	1/1:7,9:19:33.11:574,33,0	1/1:5,9:14:24.08:450,24,0	0/0:21,0:21:54.09:0,54,620	0/0:23,0:24:63.07:0,63,709	0/0:32,0:32:75.10:0,75,877	0/0:22,0:23:57.05:0,57,649	0/0:11,0:11:30.07:0,30,337	0/0:16,0:17:38.99:0,39,438	0/0:19,0:20:48.02:0,48,544	0/0:27,0:28:67.66:0,68,791	1/1:4,14:18:42.14:733,42,0	1/1:4,14:21:42.02:703,42,0	1/1:3,21:27:49.46:784,49,0	0/0:15,0:15:39.09:0,39,456	0/0:26,0:26:66.09:0,66,758	0/0:18,0:18:42.03:0,42,490	0/0:20,0:19:57.15:0,57,666
chr10	73259951	.	GT	G	1086.04	PASS	AB=0.912;AC=12;AF=0.214;AN=56;BaseQRankSum=9.297;DP=504;FS=3.045;HRun=10;HaplotypeScore=51.4241;InbreedingCoeff=0.8174;MQ=68.00;MQ0=0;MQRankSum=-2.548;QD=13.58;ReadPosRankSum=1.239;VQSLOD=3.5022;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,2:34:62.89:0,63,873	0/1:8,1:9:1.99:2,0,208	0/0:14,0:12:21.04:0,21,210	0/0:14,1:14:18.53:0,19,290	0/0:21,1:22:34.07:0,34,580	0/0:19,0:19:54.11:0,54,572	0/0:10,0:10:27.03:0,27,283	0/0:24,2:26:18.22:0,18,601	0/0:24,0:24:57.13:0,57,613	0/0:14,0:14:42.11:0,42,464	0/0:18,0:18:36.09:0,36,391	1/1:0,10:11:32.03:266,32,0	1/1:2,12:14:35.99:312,36,0	0/0:18,1:19:19.05:0,19,428	0/0:22,0:22:54.15:0,54,597	0/0:19,0:19:54.13:0,54,589	0/0:15,0:14:42.08:0,42,448	0/0:19,0:19:54.10:0,54,576	0/0:23,0:23:60.14:0,60,648	0/0:24,0:24:69.15:0,69,737	0/1:11,1:12:2:2,0,200	1/1:1,9:10:26.99:234,27,0	1/1:2,9:11:20.51:181,21,0	1/1:2,11:13:29.99:260,30,0	0/0:18,2:20:1.99:0,2,454	0/0:22,2:24:23.37:0,23,568	0/0:32,2:34:49.03:0,49,735	0/0:9,0:9:24.06:0,24,265
chr10	73260277	.	A	AG	3586.01	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=3.831;DP=328;FS=6.619;HRun=0;HaplotypeScore=40.9216;InbreedingCoeff=0.8125;MQ=65.83;MQ0=8;MQRankSum=-0.281;QD=26.37;ReadPosRankSum=3.737;VQSLOD=4.4455;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:51.17:712,51,0	1/1:0,0:3:2.04:6,2,0	0/0:17,0:9:9.78:0,10,159	0/0:16,0:6:6.37:0,6,82	0/0:10,0:12:0.05:0,0,230	0/0:10,0:10:21.05:0,21,270	0/0:10,0:10:29.92:0,30,306	0/0:14,0:9:24.04:0,24,284	0/0:7,0:7:20.85:0,21,171	1/1:0,10:10:23.95:252,24,0	1/1:0,16:16:42.07:553,42,0	1/1:1,13:13:18.06:266,18,0	1/1:0,9:9:15.05:236,15,0	0/0:11,0:10:26.98:0,27,308	0/0:12,0:11:26.48:0,26,274	0/0:5,0:5:14.60:0,15,126	0/0:19,0:17:42.08:0,42,517	0/1:11,0:11:29.90:30,0,39	0/0:7,0:6:15.02:0,15,174	0/0:12,0:12:25.97:0,26,258	0/0:15,0:14:42.08:0,42,534	1/1:0,8:8:12.04:188,12,0	1/1:0,11:11:15.05:238,15,0	1/1:0,16:16:36.12:564,36,0	1/1:0,14:14:39.13:540,39,0	0/0:7,0:7:17.98:0,18,179	0/0:14,0:14:38.80:0,39,451	0/0:3,0:3:9:0,9,88
chr10	73260487	.	C	CTTTTTTT	4753.61	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.461;DP=602;FS=5.003;HRun=8;HaplotypeScore=145.4629;InbreedingCoeff=0.9745;MQ=61.58;MQ0=0;MQRankSum=-8.683;QD=25.29;ReadPosRankSum=-2.153;VQSLOD=0.9409;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,4:18:7.27:192,7,0	0/0:6,0:6:18.06:0,18,358	0/0:19,0:16:35.84:0,36,621	0/0:13,0:14:33.08:0,33,636	0/0:32,0:32:90.27:0,90,1806	0/0:13,0:13:33.06:0,33,693	0/0:12,0:12:27.03:0,27,550	0/0:40,0:40:99:0,99,1990	0/0:18,0:18:51.16:0,51,1044	1/1:12,3:23:30.08:684,30,0	1/1:14,3:26:21.07:505,21,0	1/1:4,0:21:30.10:641,30,0	1/1:9,0:24:39.13:786,39,0	0/0:18,0:18:53.35:0,53,986	0/0:30,0:30:81.24:0,81,1626	0/0:21,0:21:57.17:0,57,1197	0/0:27,0:27:75.26:0,75,1505	0/0:25,0:25:69.15:0,69,1320	0/0:32,0:31:81.18:0,81,1531	0/0:22,0:22:57.14:0,57,1127	0/0:20,0:20:48.04:0,48,936	1/1:2,0:14:33.03:558,33,0	1/1:7,0:28:47.91:924,48,0	1/1:3,0:12:9.03:160,9,0	1/1:21,0:21:22.30:304,22,0	0/0:25,0:25:23.69:0,24,1296	0/0:30,0:30:75.15:0,75,1573	0/0:10,0:10:30.10:0,30,566
chr10	73261476	.	AT	A	977	PASS	AB=0.941;AC=11;AF=0.196;AN=56;BaseQRankSum=4.667;DP=541;FS=0.492;HRun=13;HaplotypeScore=67.5042;InbreedingCoeff=0.8902;MQ=70.66;MQ0=1;MQRankSum=1.431;QD=10.74;ReadPosRankSum=2.815;VQSLOD=3.3655;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:63.10:0,63,613	0/0:10,0:10:21.03:0,21,204	0/0:15,0:13:23.20:0,23,201	0/1:15,1:14:0.62:1,0,125	0/0:20,1:21:14.60:0,15,291	0/0:23,1:25:43.96:0,44,556	0/0:12,1:14:16.99:0,17,313	0/0:13,1:16:16.80:0,17,286	0/0:19,2:21:13.18:0,13,429	0/0:5,0:15:34.27:0,34,178	0/0:7,0:25:60.29:0,60,332	1/1:3,15:18:41.70:306,42,0	1/1:4,10:14:26.83:197,27,0	0/0:18,1:19:29.14:0,29,431	0/0:18,0:18:36.04:0,36,342	0/0:14,1:16:19.99:0,20,343	0/0:27,2:29:13.26:0,13,447	0/0:16,0:19:44.55:0,45,385	0/0:14,2:16:5.08:0,5,197	0/0:20,0:20:45.05:0,45,425	0/0:19,0:19:48.07:0,48,462	1/1:2,14:17:34.82:247,35,0	1/1:4,10:14:29.76:219,30,0	1/1:2,9:12:25.87:181,26,0	0/0:11,0:31:45.73:0,46,243	0/0:22,0:25:44.65:0,45,544	0/0:37,0:37:95.35:0,95,893	0/0:14,0:14:36.03:0,36,339
chr10	73262327	.	AACAC	A	121.06	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.567;DP=727;FS=2.028;HRun=0;HaplotypeScore=125.6498;InbreedingCoeff=0.9644;MQ=68.21;MQ0=0;MQRankSum=-1.211;QD=20.18;ReadPosRankSum=1.597;VQSLOD=3.4856;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:63.22:0,63,1547	0/0:7,0:7:21.07:0,21,528	0/0:22,0:20:48.11:0,48,970	0/0:23,0:20:51.16:0,51,1097	0/0:24,0:24:66.23:0,66,1648	0/0:20,0:20:57.19:0,57,1350	0/0:20,0:20:48.16:0,48,1155	0/0:26,0:26:63.22:0,63,1489	0/0:25,0:25:66.20:0,66,1506	0/0:46,0:46:99:0,129,2984	0/0:33,0:33:81.28:0,81,1982	0/0:32,0:32:90.31:0,90,2171	0/0:27,0:27:78.27:0,78,1906	0/0:24,0:24:60.20:0,60,1449	0/0:44,0:44:99:0,123,3071	0/0:34,0:34:90.27:0,90,2074	0/0:18,0:18:48.16:0,48,975	1/1:2,4:6:12.04:207,12,0	0/0:26,0:26:42.14:0,42,934	0/0:26,0:26:75.26:0,75,1840	0/0:20,0:20:39.13:0,39,945	0/0:30,0:30:87.30:0,87,2088	0/0:24,0:24:66.20:0,66,1552	0/0:19,0:19:39.13:0,39,903	0/0:32,0:32:87.30:0,87,2115	0/0:28,0:28:75.26:0,75,1823	0/0:40,0:40:99:0,114,2483	0/0:24,0:24:72.25:0,72,1799
chr10	73262567	.	C	CAA	907.47	PASS	AB=0.918;AC=9;AF=0.161;AN=56;BaseQRankSum=7.992;DP=684;FS=1.731;HRun=4;HaplotypeScore=159.0317;InbreedingCoeff=0.4989;MQ=60.33;MQ0=4;MQRankSum=-7.219;QD=7.15;ReadPosRankSum=-0.666;VQSLOD=-0.3900;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,4:17:62.03:192,0,62	0/0:8,0:8:24.08:0,24,353	0/0:34,0:23:52.07:0,52,637	0/0:28,0:17:37.06:0,37,507	0/0:29,0:29:87.24:0,87,1235	0/0:36,0:34:99:0,102,1480	0/0:19,0:19:57.15:0,57,775	0/0:37,0:37:99:0,108,1544	0/0:26,0:26:78.26:0,78,1146	0/1:42,0:42:31.23:31,0,110	0/0:26,0:26:30.85:0,31,121	0/0:17,0:17:9.59:0,10,41	1/1:12,6:18:34.18:363,34,0	0/0:16,0:16:42.12:0,42,597	0/0:26,0:26:75.25:0,75,1100	0/0:25,0:25:75.22:0,75,1061	0/0:25,0:25:75.19:0,75,1037	0/0:17,0:16:42.11:0,42,595	0/0:30,0:29:72.16:0,72,935	0/0:34,0:34:93.30:0,93,1343	0/0:11,0:11:27.09:0,27,398	1/1:15,4:19:13.10:267,13,0	0/1:16,1:17:19.53:95,0,20	1/1:13,1:14:0.06:106,0,0	0/0:28,0:28:29.27:0,29,113	0/0:27,0:27:80.06:0,80,1117	0/0:38,0:37:99:0,105,1458	0/0:19,0:19:57.19:0,57,838
chr10	73262569	.	AC	A	6735.35	PASS	AB=0.630;AC=17;AF=0.304;AN=56;BaseQRankSum=10.786;DP=677;FS=9.592;HRun=1;HaplotypeScore=126.0036;InbreedingCoeff=0.8903;MQ=60.26;MQ0=4;MQRankSum=-2.480;QD=34.54;ReadPosRankSum=0.490;VQSLOD=3.3621;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,10:17:50.83:342,0,51	0/0:8,0:8:24.08:0,24,383	0/0:32,0:21:54.85:0,55,728	0/0:27,2:17:4.36:0,4,553	0/0:31,0:31:93.25:0,93,1410	0/0:35,0:33:99:0,102,1629	0/0:19,0:19:57.16:0,57,858	0/0:39,0:39:99:0,114,1742	0/0:26,0:26:78.27:0,78,1243	1/1:1,38:39:99:1549,114,0	1/1:0,27:27:78.16:1046,78,0	1/1:0,15:15:39.13:545,39,0	1/1:6,12:18:53.63:595,54,0	0/0:15,0:15:42.14:0,42,671	0/0:25,0:25:75.26:0,75,1198	0/0:26,0:26:78.24:0,78,1200	0/0:25,0:25:75.20:0,75,1169	0/0:17,0:16:42.14:0,42,659	0/0:27,0:26:75.24:0,75,1088	0/0:34,0:34:99:0,102,1581	0/0:10,0:10:30.10:0,30,473	1/1:4,15:19:56.78:659,57,0	1/1:1,16:17:48.05:641,48,0	1/1:2,12:14:14.33:352,14,0	1/1:0,29:29:72.24:1007,72,0	0/0:28,0:28:39.30:0,39,1163	0/0:37,0:36:99:0,111,1708	0/0:19,0:19:57.19:0,57,898
chr10	73262570	.	C	CAAAACAA	2875.28	PASS	AB=0.959;AC=12;AF=0.214;AN=56;BaseQRankSum=7.283;DP=682;FS=2.795;HRun=0;HaplotypeScore=223.2939;InbreedingCoeff=0.3634;MQ=60.32;MQ0=4;MQRankSum=-7.124;QD=14.75;ReadPosRankSum=-3.764;VQSLOD=1.8834;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:17:8.32:289,0,8	0/0:9,0:9:24.08:0,24,627	0/0:33,0:22:53.04:0,53,697	0/0:28,0:17:28.93:0,29,704	0/0:30,0:30:90.27:0,90,2096	0/0:35,0:33:99:0,102,2561	0/0:19,0:19:48.16:0,48,1052	0/0:41,0:41:99:0,108,2231	0/0:26,0:26:78.26:0,78,1866	0/1:39,0:39:99:281,0,606	0/1:27,0:27:44.98:45,0,639	0/1:15,0:15:27.27:74,0,27	1/1:12,5:18:34.20:1096,34,0	0/0:15,0:15:42.14:0,42,912	0/0:26,0:26:75.26:0,75,1829	0/0:25,0:25:75.21:0,75,1706	0/0:25,0:25:75.24:0,75,1766	0/0:17,0:16:41.73:0,42,1020	0/0:28,0:27:63.14:0,63,1055	0/0:35,0:35:96.31:0,96,2228	0/0:10,0:10:30.10:0,30,749	1/1:15,4:19:8.55:629,9,0	0/1:16,1:17:28.27:213,0,28	1/1:13,1:14:21.41:356,21,0	0/1:29,0:29:59.48:59,0,540	0/0:29,0:29:33.31:0,33,1690	0/0:36,0:35:99:0,105,2419	0/0:19,0:19:57.09:0,57,1413
chr10	73262912	.	G	GA	2053.27	PASS	AB=0.656;AC=16;AF=0.286;AN=56;BaseQRankSum=-5.468;DP=494;FS=6.435;HRun=11;HaplotypeScore=55.4018;InbreedingCoeff=0.7408;MQ=68.82;MQ0=0;MQRankSum=-0.074;QD=14.36;ReadPosRankSum=-0.304;VQSLOD=3.5243;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:23.41:0,23,361	0/0:12,0:12:29.88:0,30,232	0/0:14,0:10:3.83:0,4,91	0/0:13,0:8:11.53:0,12,70	0/0:27,0:27:53.29:0,53,475	0/0:21,1:22:23.32:0,23,364	0/0:14,0:16:30.91:0,31,221	0/0:21,1:22:4.82:0,5,208	0/0:10,0:11:28.91:0,29,215	1/1:9,21:31:64.39:606,64,0	1/1:4,13:18:16.68:319,17,0	1/1:4,7:12:26.89:255,27,0	1/1:1,9:11:23.82:215,24,0	0/0:8,0:8:8.92:0,9,70	0/0:17,0:18:48.90:0,49,360	0/0:16,0:16:32.86:0,33,255	0/0:21,0:21:59.76:0,60,463	0/0:19,2:21:26.34:0,26,387	0/0:12,0:12:23.85:0,24,181	0/0:19,0:20:19.39:0,19,320	0/0:8,0:8:20.85:0,21,157	1/1:1,6:7:6.01:61,6,0	1/1:2,15:19:18.32:323,18,0	0/1:2,9:11:5.20:134,0,5	1/1:4,14:18:9.83:281,10,0	0/0:26,5:31:6.33:0,6,407	0/0:33,0:34:70.68:0,71,539	0/1:11,5:16:52.48:52,0,193
chr10	73263167	.	GA	G	509.46	PASS	AB=0.708;AC=9;AF=0.161;AN=56;BaseQRankSum=1.578;DP=509;FS=33.087;HRun=14;HaplotypeScore=77.0881;InbreedingCoeff=0.4370;MQ=69.13;MQ0=10;MQRankSum=0.967;QD=5.99;ReadPosRankSum=2.262;VQSLOD=0.2080;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:31:42.75:0,43,220	0/0:2,0:2:3:0,3,28	0/0:47,0:20:24.42:0,24,220	0/0:38,0:18:7.76:0,8,93	0/0:16,1:17:21.08:0,21,291	0/0:17,0:17:19.21:0,19,306	0/0:14,0:15:32.83:0,33,284	0/0:20,0:19:26.91:0,27,227	0/0:8,0:11:13.18:0,13,170	0/0:23,0:21:4.41:0,4,237	0/0:15,1:17:20.90:0,21,294	1/1:12,5:17:1.62:153,2,0	1/1:1,4:6:17.82:122,18,0	0/1:17,1:18:13.08:13,0,155	0/0:9,0:10:20.34:0,20,171	0/0:7,0:7:18.02:0,18,167	0/0:25,1:27:3.27:0,3,440	0/0:7,0:18:20.15:0,20,114	0/0:27,0:27:61.27:0,61,521	0/0:7,0:8:17.86:0,18,154	0/0:9,0:9:9.01:0,9,84	1/1:4,7:11:13.64:84,14,0	0/1:2,5:9:5.90:93,0,6	0/1:9,14:24:14.98:188,0,15	0/0:14,0:14:17.12:0,17,247	0/0:29,1:31:37.19:0,37,462	0/0:20,0:23:16.66:0,17,331	0/0:7,2:10:6.29:0,6,189
chr10	73263247	.	T	TGG	740.48	PASS	AB=0.869;AC=10;AF=0.179;AN=56;BaseQRankSum=-0.465;DP=410;FS=15.955;HRun=0;HaplotypeScore=108.6508;InbreedingCoeff=-0.2211;MQ=56.61;MQ0=5;MQRankSum=1.579;QD=5.57;ReadPosRankSum=-0.619;VQSLOD=1.9481;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,5:18:99:166,0,190	0/0:5,0:5:12.03:0,12,152	0/0:20,0:7:12.39:0,12,87	0/0:24,0:12:14.16:0,14,176	0/0:17,0:17:42.72:0,43,593	0/0:23,0:23:63.11:0,63,740	0/0:12,0:12:36.12:0,36,486	0/0:21,0:21:60.20:0,60,817	0/0:10,0:10:30.09:0,30,390	0/1:18,0:18:73.32:73,0,144	0/1:13,0:13:46.83:47,0,68	0/1:12,2:14:88.08:88,0,128	0/1:5,2:7:29.13:75,0,29	0/0:21,0:21:60.08:0,60,715	0/0:16,0:16:45.91:0,46,525	0/0:7,0:7:14.71:0,15,166	0/0:17,0:16:42.11:0,42,528	0/1:12,1:12:37.07:37,0,141	0/0:13,0:13:36.12:0,36,488	0/0:17,0:17:48.12:0,48,596	0/0:4,0:4:8.99:0,9,97	0/1:9,4:14:71.06:206,0,71	0/1:10,1:11:99:111,0,113	0/1:7,4:11:14.18:18,0,14	0/1:13,0:13:63.14:63,0,110	0/0:19,0:19:57.18:0,57,738	0/0:25,0:25:68.90:0,69,859	0/0:6,0:6:7.59:0,8,108
chr10	73263248	.	T	TGG	336.58	PASS	AB=0.942;AC=8;AF=0.143;AN=56;BaseQRankSum=0.625;DP=398;FS=18.030;HRun=0;HaplotypeScore=105.4107;InbreedingCoeff=-0.2015;MQ=55.31;MQ0=4;MQRankSum=-0.591;QD=3.15;ReadPosRankSum=-0.712;VQSLOD=0.4097;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:26.75:27,0,226	0/0:5,0:5:12.03:0,12,150	0/0:18,0:6:3.07:0,3,60	0/0:24,0:12:25.55:0,26,213	0/0:17,0:17:50.02:0,50,589	0/0:21,0:21:56.76:0,57,670	0/0:12,0:12:36.12:0,36,483	0/0:21,0:21:60.16:0,60,787	0/0:10,0:10:30.09:0,30,380	0/1:15,1:16:99:183,0,126	0/1:9,0:9:25.36:25,0,50	0/1:13,0:13:4.59:5,0,149	0/0:5,0:6:1.59:0,2,55	0/0:21,0:21:54.15:0,54,676	0/0:16,0:16:45.34:0,45,539	0/0:7,0:7:14.71:0,15,162	0/0:17,0:16:42.07:0,42,512	0/1:12,1:12:32.98:33,0,89	0/0:13,0:13:36.12:0,36,472	0/0:17,0:17:51.08:0,51,599	0/0:4,0:4:8.94:0,9,91	0/1:15,0:15:32.10:32,0,88	0/1:12,0:11:30:30,0,146	0/0:9,1:11:5.50:0,6,43	0/1:6,6:12:99:131,0,110	0/0:19,0:19:57.18:0,57,717	0/0:25,0:25:68.83:0,69,842	0/0:7,0:7:0.19:0,0,85
chr10	73264514	.	CAGGAAGGTTTAATTAAGAA	C	5003.13	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.738;DP=534;FS=29.695;HRun=0;HaplotypeScore=261.4286;InbreedingCoeff=0.9322;MQ=71.30;MQ0=1;MQRankSum=-9.435;QD=87.77;ReadPosRankSum=1.915;VQSLOD=3.2935;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:36.12:0,36,3155	0/0:8,0:8:21.07:0,21,1915	0/0:19,0:17:48.16:0,48,2744	0/0:17,0:15:36.12:0,36,2058	0/0:30,0:30:84.28:0,84,6591	0/0:22,0:22:66.23:0,66,5582	0/0:21,0:21:60.21:0,60,4759	0/0:26,0:26:72.25:0,72,5346	0/0:18,0:18:45.15:0,45,3458	0/0:20,0:20:57.20:0,57,4313	0/0:23,0:23:69.24:0,69,5700	1/1:4,11:15:27.09:1365,27,0	1/1:1,6:7:18.06:922,18,0	0/0:19,0:19:57.20:0,57,4709	0/0:18,0:18:48.16:0,48,4112	0/0:22,0:22:57.20:0,57,4546	0/0:23,0:22:60.21:0,60,4737	0/0:17,0:17:36.12:0,36,2808	0/0:20,0:20:57.20:0,57,3911	0/0:27,0:27:81.28:0,81,6752	0/0:27,0:27:72.25:0,72,5735	1/1:4,10:14:27.09:1264,27,0	1/1:1,6:7:0.16:666,0,0	1/1:7,7:14:18.06:786,18,0	0/0:17,0:17:51.18:0,51,4418	0/0:24,0:24:69.24:0,69,6021	0/0:31,0:30:84.29:0,84,6523	0/0:14,0:14:42.14:0,42,3566
chr10	73264641	.	AAAAAACAAAAAAAAAAC	A	1002.55	PASS	AB=0.781;AC=4;AF=0.071;AN=56;BaseQRankSum=7.649;DP=622;FS=31.231;HRun=0;HaplotypeScore=219.7000;InbreedingCoeff=0.3913;MQ=57.53;MQ0=35;MQRankSum=4.911;QD=17.90;ReadPosRankSum=-0.534;VQSLOD=0.9247;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:73.15:0,73,1792	0/0:8,0:8:24.08:0,24,922	0/0:80,0:13:4.32:0,4,316	0/0:93,0:24:18.42:0,18,720	0/0:40,0:38:97.15:0,97,3956	0/0:20,0:20:60.20:0,60,3086	0/0:13,0:12:33.11:0,33,1408	0/0:26,0:26:62.61:0,63,2185	0/0:12,0:12:33.11:0,33,1512	0/1:11,15:24:32.73:546,0,33	1/1:17,0:17:14.01:397,14,0	0/0:10,0:10:27.05:0,27,826	0/0:9,0:7:18.06:0,18,588	0/0:14,0:14:39.13:0,39,1784	0/0:17,0:16:43.70:0,44,1992	0/0:10,0:10:30.05:0,30,1463	0/0:21,0:19:54.19:0,54,2444	0/0:19,0:18:40.59:0,41,1294	0/0:20,0:19:51.17:0,51,2082	0/0:22,0:22:63.22:0,63,3079	0/0:15,0:14:39.11:0,39,2073	0/0:4,0:4:6.02:0,6,157	0/0:12,0:11:27.98:0,28,918	0/0:2,0:2:6.02:0,6,311	0/1:12,1:13:9.80:171,0,10	0/0:11,0:10:25.34:0,25,1078	0/0:38,0:36:99:0,105,4816	0/0:16,0:13:27.09:0,27,1405
chr10	73264642	.	AAAAACAAAAAAAAAAC	A	1204.51	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.733;DP=615;FS=37.953;HRun=0;HaplotypeScore=209.6434;InbreedingCoeff=0.8015;MQ=56.99;MQ0=34;MQRankSum=4.498;QD=21.90;ReadPosRankSum=-1.900;VQSLOD=1.3905;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:65.97:0,66,1528	0/0:8,0:8:24.08:0,24,884	0/0:76,0:12:16.44:0,16,313	0/0:88,0:23:9.37:0,9,632	0/0:40,0:38:95.30:0,95,3655	0/0:20,0:20:60.17:0,60,2912	0/0:14,0:13:36.12:0,36,1361	0/0:26,0:26:64.71:0,65,2128	0/0:12,0:12:33.11:0,33,1413	1/1:26,0:24:27.48:604,27,0	1/1:4,12:16:29.91:547,30,0	0/0:11,0:11:26.57:0,27,747	0/0:9,0:7:18.06:0,18,494	0/0:14,0:14:39.13:0,39,1690	0/0:17,0:16:43.39:0,43,1835	0/0:10,0:10:30.07:0,30,1419	0/0:21,0:19:54.18:0,54,2274	0/0:19,0:18:39.35:0,39,1148	0/0:21,0:20:54.11:0,54,1900	0/0:22,0:22:63.22:0,63,2946	0/0:15,0:14:36.12:0,36,1927	0/0:4,0:4:6.02:0,6,137	0/0:12,0:11:24.72:0,25,838	0/0:2,0:2:6.02:0,6,282	1/1:3,10:13:5.86:187,6,0	0/0:11,0:10:1.46:0,1,932	0/0:38,0:36:99:0,105,4501	0/0:16,0:13:27.09:0,27,1337
chr10	73264932	.	A	AG	586.81	PASS	AB=0.810;AC=6;AF=0.107;AN=56;BaseQRankSum=4.861;DP=542;FS=1.512;HRun=0;HaplotypeScore=77.7977;InbreedingCoeff=-0.1227;MQ=62.03;MQ0=33;MQRankSum=-8.206;QD=5.02;ReadPosRankSum=-6.600;VQSLOD=1.9357;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:30:29.60:0,30,341	0/0:10,0:10:14.23:0,14,319	0/0:13,0:11:18.83:0,19,257	0/0:8,0:7:12.32:0,12,150	0/0:26,0:26:75.21:0,75,1006	0/0:19,0:18:51.17:0,51,713	0/0:15,0:15:45.08:0,45,563	0/0:27,0:23:63.14:0,63,841	0/0:18,0:17:51.15:0,51,682	0/1:20,4:23:99:131,0,130	0/1:14,5:18:99:178,0,101	0/1:15,2:17:13.04:13,0,376	0/0:14,0:13:39.12:0,39,526	0/0:6,0:6:18.01:0,18,214	0/0:21,0:20:60.18:0,60,806	0/0:18,0:17:51.08:0,51,669	0/0:25,0:25:75.06:0,75,954	0/0:11,0:6:14.47:0,14,203	0/0:28,0:25:70.31:0,70,851	0/0:29,0:28:69.37:0,69,928	0/0:9,0:7:21.06:0,21,277	0/1:9,4:13:99:103,0,262	0/1:14,5:19:99:146,0,336	0/0:30,0:21:57.10:0,57,726	0/1:17,8:22:99:139,0,107	0/0:19,0:19:52.45:0,52,749	0/0:29,0:26:74.76:0,75,997	0/0:13,0:9:27.02:0,27,335
chr10	73265035	.	A	AT	292.59	PASS	AB=0.798;AC=4;AF=0.074;AN=54;BaseQRankSum=5.164;DP=630;FS=0.000;HRun=0;HaplotypeScore=93.1695;InbreedingCoeff=-0.0836;MQ=39.82;MQ0=137;MQRankSum=-4.533;QD=4.37;ReadPosRankSum=0.015;VQSLOD=3.2347;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:12:85.50:86,0,123	0/0:15,0:13:33.10:0,33,441	0/0:1,0:1:2.96:0,3,19	./.	0/0:40,0:33:90.30:0,90,1235	0/0:23,0:18:51.15:0,51,673	0/0:24,0:20:56.92:0,57,755	0/0:36,0:30:87.29:0,87,1211	0/0:28,0:26:75.21:0,75,1025	0/1:8,5:12:99:113,0,149	0/1:12,5:13:99:107,0,139	0/0:22,0:14:36.11:0,36,487	0/0:24,0:14:42.12:0,42,569	0/0:17,0:8:24.07:0,24,288	0/0:26,0:18:45.15:0,45,628	0/0:18,0:15:38.95:0,39,470	0/0:43,0:27:63.19:0,63,849	0/0:20,0:12:33.11:0,33,461	0/0:23,0:14:39.08:0,39,474	0/0:20,0:19:57.17:0,57,737	0/0:17,0:10:27.08:0,27,342	0/0:27,0:17:45.15:0,45,625	0/0:23,0:15:42.14:0,42,580	0/0:36,0:19:48.15:0,48,642	0/1:9,7:13:95.13:95,0,185	0/0:20,0:19:57.16:0,57,675	0/0:37,0:35:99:0,104,1295	0/0:22,0:11:30.09:0,30,384
chr10	73265039	.	A	AT	254.30	PASS	AB=0.933;AC=4;AF=0.074;AN=54;BaseQRankSum=5.226;DP=613;FS=0.000;HRun=0;HaplotypeScore=95.3576;InbreedingCoeff=-0.0845;MQ=42.78;MQ0=113;MQRankSum=-4.753;QD=3.80;ReadPosRankSum=-1.052;VQSLOD=2.9720;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,7:12:99:165,0,134	0/0:15,0:13:33.11:0,33,458	0/0:3,0:3:5.98:0,6,61	./.	0/0:39,0:33:90.30:0,90,1235	0/0:22,0:19:51.16:0,51,695	0/0:21,0:18:53.96:0,54,704	0/0:39,0:33:95.75:0,96,1184	0/0:26,0:24:72.24:0,72,1006	0/1:13,0:13:50.17:50,0,196	0/1:19,0:15:71.22:71,0,198	0/0:20,0:14:36.12:0,36,503	0/0:22,0:14:42.14:0,42,588	0/0:15,0:8:24.07:0,24,288	0/0:24,0:20:54.15:0,54,702	0/0:18,0:15:36.03:0,36,467	0/0:40,0:27:60.20:0,60,836	0/0:18,0:13:33.11:0,33,461	0/0:25,0:16:44.95:0,45,502	0/0:22,0:21:60.63:0,61,746	0/0:16,0:11:33.09:0,33,416	0/0:28,0:19:51.15:0,51,677	0/0:23,0:15:45.15:0,45,622	0/0:33,0:18:48.16:0,48,649	0/1:16,0:13:77.06:77,0,196	0/0:18,0:17:51.15:0,51,632	0/0:36,0:34:93:0,93,1130	0/0:22,0:11:27.56:0,28,349
chr10	73267060	.	T	TAAACA	4236.83	PASS	AB=0.900;AC=18;AF=0.321;AN=56;BaseQRankSum=2.044;DP=489;FS=2.751;HRun=0;HaplotypeScore=123.3971;InbreedingCoeff=0.7531;MQ=45.45;MQ0=62;MQRankSum=-4.990;QD=45.56;ReadPosRankSum=5.574;VQSLOD=4.7842;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,9:11:27.09:820,27,0	0/0:8,0:8:24.08:0,24,532	0/0:24,0:5:12.03:0,12,263	0/0:47,0:8:7.28:0,7,147	0/0:27,0:27:72.15:0,72,1458	0/0:20,0:19:45.15:0,45,1009	0/0:14,0:12:33.10:0,33,623	0/0:36,0:34:74.74:0,75,1432	0/0:12,0:11:30.10:0,30,635	0/1:15,0:12:35.97:434,0,36	1/1:2,7:7:21.07:570,21,0	1/1:4,6:6:12.04:360,12,0	1/1:0,3:4:9.03:275,9,0	0/0:13,0:11:30.09:0,30,624	0/0:17,0:14:41.94:0,42,739	0/0:13,0:13:27.96:0,28,548	0/0:45,0:38:90.16:0,90,1872	1/1:8,3:7:9.01:220,9,0	0/0:22,0:13:33.10:0,33,716	0/0:17,0:16:41.92:0,42,842	0/0:6,0:1:0.89:0,1,2	1/1:0,2:3:6.01:184,6,0	1/1:0,7:8:21.06:644,21,0	0/1:6,2:5:38.38:174,0,38	1/1:2,6:7:18.06:555,18,0	0/0:31,0:28:79.17:0,79,1444	0/0:21,0:20:55.98:0,56,1143	0/0:22,0:14:33.07:0,33,636
chr10	73267067	.	C	CAAGA	1712.68	PASS	AB=0.936;AC=17;AF=0.304;AN=56;BaseQRankSum=8.156;DP=522;FS=2.598;HRun=0;HaplotypeScore=95.6466;InbreedingCoeff=0.5876;MQ=36.34;MQ0=124;MQRankSum=-4.717;QD=18.62;ReadPosRankSum=4.857;VQSLOD=3.4600;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,8:9:24.08:572,24,0	0/0:12,0:9:24.08:0,24,447	0/0:25,0:3:9.01:0,9,113	0/0:48,0:7:8.73:0,9,132	0/0:24,0:23:63.69:0,64,1145	0/0:21,0:20:45.15:0,45,852	0/0:10,0:9:24.08:0,24,421	0/0:34,0:28:59.67:0,60,1030	0/0:18,0:11:30.10:0,30,527	0/1:16,0:12:32.99:137,0,33	1/1:3,2:2:6.02:133,6,0	1/1:5,1:1:3.01:67,3,0	1/1:0,1:1:3.01:73,3,0	0/0:16,0:12:30.05:0,30,521	0/0:14,0:9:27.09:0,27,506	0/0:16,0:13:27.03:0,27,499	0/0:55,0:44:93.28:0,93,1625	0/1:11,2:6:45.03:139,0,45	0/0:26,0:16:42.14:0,42,760	0/0:16,0:15:41.94:0,42,722	0/0:8,0:1:0.47:0,0,1	1/1:2,1:1:3.01:70,3,0	1/1:1,4:4:12.04:280,12,0	0/1:13,1:5:40.11:65,0,40	1/1:6,5:6:15.05:355,15,0	0/0:33,0:26:78.10:0,78,1340	0/0:25,0:22:57.06:0,57,985	0/0:28,0:14:30.10:0,30,576
chr10	73268152	.	G	GC	136.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.941;DP=633;FS=10.034;HRun=0;HaplotypeScore=70.7510;InbreedingCoeff=0.9783;MQ=86.40;MQ0=0;MQRankSum=-2.433;QD=22.82;ReadPosRankSum=0.308;VQSLOD=4.0634;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.29:0,87,1217	0/0:7,0:7:21.07:0,21,294	0/0:23,0:23:69.21:0,69,924	0/0:20,0:20:51.59:0,52,678	0/0:31,0:31:93.31:0,93,1301	0/0:23,0:23:69.22:0,69,947	0/0:21,0:21:63.19:0,63,863	0/0:32,0:32:93.31:0,93,1300	0/0:24,0:24:72.24:0,72,1007	0/0:37,0:37:99:0,111,1553	0/0:21,0:21:60.20:0,60,838	0/0:23,0:23:69.22:0,69,948	0/0:21,0:21:63.18:0,63,861	0/0:16,0:16:48.16:0,48,671	0/0:27,0:27:81.25:0,81,1114	0/0:22,0:22:66.22:0,66,921	0/0:25,1:26:30.05:0,30,943	1/1:0,6:6:15.05:225,15,0	0/0:12,0:12:36.12:0,36,504	0/0:35,0:35:99:0,99,1384	0/0:27,0:27:78.26:0,78,1091	0/0:31,0:31:93.31:0,93,1299	0/0:22,0:22:63.21:0,63,880	0/0:13,0:13:36.12:0,36,503	0/0:19,0:19:57.19:0,57,797	0/0:29,0:29:81.26:0,81,1114	0/0:26,0:26:72.24:0,72,1005	0/0:9,0:9:27.03:0,27,336
chr10	73268472	.	TCAACCAAC	T	4989.90	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.869;DP=531;FS=9.617;HRun=0;HaplotypeScore=128.8853;InbreedingCoeff=0.9485;MQ=62.79;MQ0=5;MQRankSum=-8.009;QD=29.35;ReadPosRankSum=0.353;VQSLOD=3.8641;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,12:21:18.06:397,18,0	0/0:7,0:7:15.05:0,15,483	0/0:29,0:21:17.26:0,17,241	0/0:17,0:12:15.02:0,15,197	0/0:26,0:26:60.19:0,60,1885	0/0:20,0:20:45.14:0,45,1662	0/0:14,0:14:33.09:0,33,1064	0/0:18,0:17:21.07:0,21,548	0/0:12,0:12:27.07:0,27,895	1/1:4,13:17:36.10:762,36,0	1/1:8,13:21:23.93:474,24,0	1/1:5,11:16:21.07:535,21,0	1/1:8,14:22:21.07:534,21,0	0/0:21,0:21:48.04:0,48,1419	0/0:17,0:17:30.10:0,30,1104	0/0:21,0:21:51.17:0,51,1610	0/0:27,0:27:69.23:0,69,2315	0/0:27,0:27:54.05:0,54,1801	0/0:20,0:19:25.89:0,26,821	0/0:25,0:25:63.22:0,63,2311	0/0:8,0:8:11.06:0,11,268	1/1:4,21:25:56.98:1194,57,0	1/1:7,13:20:33.11:770,33,0	1/1:7,11:18:3.01:76,3,0	1/1:6,4:10:11.97:246,12,0	0/0:22,0:22:51.16:0,51,1706	0/0:23,0:23:57.17:0,57,1970	0/0:7,0:7:15.05:0,15,408
chr10	73270306	.	C	CTCAG	6536.58	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=-12.115;DP=649;FS=5.547;HRun=0;HaplotypeScore=108.4524;InbreedingCoeff=0.9987;MQ=82.38;MQ0=0;MQRankSum=-2.156;QD=55.87;ReadPosRankSum=2.993;VQSLOD=6.2695;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,160,2880	0/0:10,0:10:27.09:0,27,497	0/0:19,0:19:50.20:0,50,831	0/0:18,0:18:38.88:0,39,558	0/0:26,0:26:75.26:0,75,1361	0/0:28,0:27:81.28:0,81,1481	0/0:21,0:21:63.20:0,63,1119	0/0:31,0:31:72.24:0,72,1286	0/0:18,0:18:51.17:0,51,929	0/0:19,0:19:51.17:0,51,939	0/0:12,0:12:33.11:0,33,598	1/1:4,18:23:45.15:1179,45,0	1/1:4,18:23:45.15:1167,45,0	0/0:17,0:17:45.15:0,45,828	0/0:38,0:38:93.32:0,93,1711	0/0:14,0:14:36.12:0,36,662	0/0:24,0:24:66.21:0,66,1164	0/0:9,0:9:21.07:0,21,386	0/0:21,0:20:51.17:0,51,892	0/0:25,0:25:75.26:0,75,1371	0/0:38,0:38:99:0,102,1867	1/1:1,19:22:54.19:1424,54,0	1/1:1,21:22:47.89:1261,48,0	1/1:3,24:27:57.20:1505,57,0	0/0:20,0:20:60.21:0,60,1095	0/0:30,0:30:83.18:0,83,1527	0/0:39,0:38:99:0,105,1840	./.
chr10	73270923	.	CT	C	1226.81	PASS	AB=0.850;AC=9;AF=0.161;AN=56;BaseQRankSum=6.457;DP=515;FS=36.769;HRun=10;HaplotypeScore=51.1252;InbreedingCoeff=0.5816;MQ=74.88;MQ0=0;MQRankSum=1.919;QD=10.14;ReadPosRankSum=-0.489;VQSLOD=-0.0785;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:58.72:0,59,824	0/0:8,0:8:21.06:0,21,232	0/1:11,2:13:25.03:25,0,197	0/0:5,1:6:7.83:0,8,66	0/0:29,0:29:69.18:0,69,755	0/0:18,1:19:31.10:0,31,571	0/0:17,0:17:42.11:0,42,465	0/0:29,1:30:58.17:0,58,870	0/1:13,4:17:36.06:36,0,323	1/1:3,26:29:74.93:644,75,0	1/1:5,15:20:20.60:340,21,0	0/0:18,0:18:42.11:0,42,458	0/0:12,0:12:36.10:0,36,398	0/0:15,0:15:39.11:0,39,431	0/0:16,2:18:19.07:0,19,439	0/0:8,0:8:24.06:0,24,266	0/0:31,2:34:34.87:0,35,785	0/0:1,0:8:14.47:0,14,84	0/0:21,1:22:28.08:0,28,532	0/0:21,0:21:57.15:0,57,623	0/0:11,0:11:30.08:0,30,332	0/0:12,0:12:33.09:0,33,361	0/0:24,0:24:60.10:0,60,636	0/0:8,0:8:21.06:0,21,232	1/1:6,15:21:35.99:313,36,0	0/1:18,3:21:26.98:27,0,414	0/0:29,0:29:72.17:0,72,779	0/0:16,0:16:30.07:0,30,324
chr10	73271953	.	T	TGG	668.42	PASS	AB=1.000;AC=7;AF=0.140;AN=50;BaseQRankSum=0.422;DP=313;FS=4.640;HRun=5;HaplotypeScore=55.3216;InbreedingCoeff=0.5233;MQ=81.43;MQ0=5;MQRankSum=-1.234;QD=15.54;ReadPosRankSum=-1.755;VQSLOD=-0.4982;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:18:42.14:739,42,0	0/0:9,0:9:27.09:0,27,357	0/0:34,0:25:32.88:0,33,601	0/0:39,0:26:20.65:0,21,417	0/0:14,0:14:39.11:0,39,498	0/0:10,0:10:27.09:0,27,360	0/0:18,0:18:48.05:0,48,613	0/0:22,0:22:57.04:0,57,708	0/0:13,0:13:39.13:0,39,516	./.	./.	0/0:2,0:2:0.44:0,0,1	0/0:2,0:2:0.41:0,0,1	0/0:11,0:11:30.10:0,30,398	0/0:6,0:6:18.06:0,18,240	0/0:9,0:9:27.09:0,27,359	0/0:11,0:11:33.11:0,33,438	0/1:4,0:4:7.71:8,0,22	0/0:9,0:8:24.07:0,24,307	0/0:18,0:18:54.18:0,54,718	0/0:15,0:15:40.03:0,40,540	1/1:7,0:8:2.19:16,2,0	0/1:1,0:1:0:0,0,0	0/1:11,0:11:22.47:22,0,61	./.	0/0:11,0:12:32.83:0,33,395	0/0:8,0:8:24.08:0,24,320	0/0:3,0:3:9.03:0,9,116
chr10	73272539	.	GCCC	G	5423.16	PASS	AB=0.511;AC=9;AF=0.161;AN=56;BaseQRankSum=13.297;DP=707;FS=2.313;HRun=3;HaplotypeScore=100.7783;InbreedingCoeff=0.8858;MQ=58.26;MQ0=0;MQRankSum=1.791;QD=49.75;ReadPosRankSum=2.423;VQSLOD=4.5662;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,3013	0/0:8,0:8:24.08:0,24,592	0/0:21,0:18:51.18:0,51,1258	0/0:32,0:29:81.28:0,81,1905	0/0:30,0:30:90.31:0,90,2217	0/0:18,0:18:54.19:0,54,1331	0/0:24,0:24:69.24:0,69,1702	0/0:30,0:30:90.30:0,90,2138	0/0:28,0:28:84.29:0,84,2048	0/0:32,0:32:93.32:0,93,2264	0/0:26,0:25:75.26:0,75,1846	0/1:1,22:23:7.75:1088,0,8	1/1:0,19:19:57.20:1062,57,0	0/0:37,0:37:99:0,111,2736	0/0:28,0:28:84.29:0,84,2070	0/0:20,0:20:60.21:0,60,1479	0/0:27,0:27:81.28:0,81,1996	0/0:18,0:18:51.18:0,51,1245	0/0:19,0:19:54.19:0,54,1302	0/0:28,0:28:81.25:0,81,1853	0/0:42,0:42:99:0,123,2966	1/1:0,21:21:63.22:1166,63,0	1/1:0,19:19:51.17:945,51,0	1/1:0,27:27:63.22:1162,63,0	0/0:21,0:21:63.22:0,63,1538	0/0:27,0:27:81.28:0,81,1995	0/0:33,0:33:99:0,99,2337	0/0:6,0:6:18.06:0,18,444
chr10	73273246	.	T	TA	1161.99	PASS	AB=0.920;AC=23;AF=0.411;AN=56;BaseQRankSum=9.103;DP=504;FS=1.523;HRun=15;HaplotypeScore=74.0635;InbreedingCoeff=0.5842;MQ=71.69;MQ0=3;MQRankSum=1.045;QD=5.03;ReadPosRankSum=1.112;VQSLOD=2.3344;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,11:16:7.03:107,7,0	0/0:10,0:11:16.50:0,17,95	0/0:18,0:14:6.16:0,6,35	0/1:14,1:11:10.01:13,0,10	0/0:29,0:29:18.64:0,19,200	0/0:15,0:15:17.32:0,17,107	0/0:20,1:21:15.48:0,15,205	0/0:29,0:30:32.03:0,32,196	0/0:17,0:19:22.35:0,22,131	1/1:22,0:22:43.28:182,43,0	1/1:22,0:22:32.21:133,32,0	1/1:13,0:13:16.76:82,17,0	1/1:19,0:19:36.70:189,37,0	0/1:12,2:14:20.88:21,0,113	0/0:28,2:30:11.34:0,11,170	0/1:17,2:19:18.25:18,0,129	0/0:20,2:23:14.80:0,15,196	0/0:8,0:8:17.57:0,18,108	0/0:15,0:17:1.34:0,1,96	0/1:13,2:15:29.87:30,0,69	0/1:11,0:11:5.13:5,0,72	1/1:12,0:12:23.11:133,23,0	1/1:19,0:19:33.42:156,33,0	1/1:10,0:10:19.60:90,20,0	1/1:23,0:23:48.67:207,49,0	0/0:10,0:12:15.66:0,16,83	0/0:22,0:23:35.97:0,36,207	0/0:17,0:17:26.13:0,26,161
chr10	73273249	.	A	AAG	2753.70	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-0.441;DP=503;FS=3.612;HRun=0;HaplotypeScore=74.6465;InbreedingCoeff=0.9729;MQ=69.63;MQ0=4;MQRankSum=2.378;QD=20.40;ReadPosRankSum=5.049;VQSLOD=3.5240;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:10.64:0,11,122	0/0:11,0:11:30.03:0,30,360	0/0:18,0:13:13.85:0,14,166	0/0:17,0:10:14.43:0,14,105	0/0:29,0:29:81.18:0,81,923	0/0:15,0:15:45.07:0,45,514	0/0:21,0:21:59.07:0,59,742	0/0:29,0:29:74.29:0,74,870	0/0:19,0:19:45.04:0,45,527	1/1:1,22:24:65.82:874,66,0	1/1:3,17:21:43.68:602,44,0	1/1:13,0:13:16.86:79,17,0	1/1:17,0:17:35.94:166,36,0	0/0:16,0:16:44.86:0,45,518	0/0:29,0:29:84.05:0,84,952	0/0:19,0:19:56.92:0,57,662	0/0:22,0:22:62.97:0,63,766	0/0:8,0:8:24.06:0,24,324	0/0:16,0:16:44.04:0,44,469	0/0:13,0:13:35.86:0,36,394	0/0:11,0:11:31.61:0,32,363	1/1:11,0:11:8.49:111,8,0	1/1:15,1:16:37.05:212,37,0	1/1:10,0:10:22.72:111,23,0	1/1:2,21:22:54.18:803,54,0	0/0:13,0:13:36.06:0,36,407	0/0:24,0:24:69:0,69,796	0/0:20,0:20:60.08:0,60,691
chr10	73273250	.	A	AG	2313.95	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=9.600;DP=503;FS=5.063;HRun=0;HaplotypeScore=61.2931;InbreedingCoeff=0.9464;MQ=68.22;MQ0=4;MQRankSum=0.877;QD=17.14;ReadPosRankSum=5.672;VQSLOD=5.8714;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:21.43:0,21,151	0/0:10,0:10:30.02:0,30,335	0/0:18,0:13:2.07:0,2,163	0/0:15,0:8:11.34:0,11,98	0/0:29,0:29:84.47:0,84,898	0/0:15,0:15:45.07:0,45,490	0/0:21,0:21:58.32:0,58,691	0/0:28,0:28:73.05:0,73,824	0/0:20,0:20:45.05:0,45,498	1/1:23,0:23:19.41:304,19,0	1/1:20,0:20:11.59:257,12,0	1/1:1,12:13:18:218,18,0	1/1:0,17:17:39.12:467,39,0	0/0:16,0:16:41.55:0,42,461	0/0:30,0:30:82.39:0,82,891	0/0:19,0:19:53.60:0,54,599	0/0:22,0:22:60.96:0,61,700	0/0:8,0:8:24.06:0,24,298	0/0:16,0:16:47.02:0,47,465	0/0:12,0:12:31.83:0,32,345	0/0:12,0:12:31.60:0,32,343	1/1:2,10:12:28.97:318,29,0	1/1:1,15:16:38.93:437,39,0	1/1:2,9:11:11.79:245,12,0	1/1:23,0:22:50.66:271,51,0	0/0:14,0:14:39.06:0,39,412	0/0:24,0:24:66.10:0,66,735	0/0:20,0:20:60.08:0,60,657
chr10	73273756	.	C	CA	3897.79	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.167;DP=601;FS=6.965;HRun=0;HaplotypeScore=61.8194;InbreedingCoeff=0.9958;MQ=97.90;MQ0=1;MQRankSum=-2.059;QD=41.91;ReadPosRankSum=1.780;VQSLOD=4.2790;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1381	0/0:8,0:8:24.07:0,24,319	0/0:29,0:29:81.23:0,81,1080	0/0:32,0:32:93.21:0,93,1223	0/0:34,0:34:99:0,99,1384	0/0:25,0:25:75.25:0,75,1049	0/0:21,0:21:63.19:0,63,862	0/0:21,0:21:63.20:0,63,863	0/0:22,0:21:57.19:0,57,793	0/0:17,0:17:51.16:0,51,698	0/0:22,0:22:66.22:0,66,918	1/1:0,24:24:69.23:1035,69,0	1/1:0,25:25:69.23:1018,69,0	0/0:15,0:15:45.15:0,45,629	0/0:19,0:19:57.17:0,57,762	0/0:20,0:20:60.20:0,60,839	0/0:21,0:21:63.21:0,63,877	0/0:5,0:5:15.05:0,15,210	0/0:20,0:20:60.20:0,60,839	0/0:20,0:20:60.19:0,60,822	0/0:32,0:32:96.32:0,96,1340	1/1:0,13:13:39.13:585,39,0	1/1:0,13:13:33.11:495,33,0	1/1:0,18:18:51.17:764,51,0	0/0:24,0:24:72.24:0,72,1007	0/0:30,0:30:87.28:0,87,1201	0/0:19,0:19:57.19:0,57,795	0/0:19,0:19:54.18:0,54,755
chr10	73274507	.	CA	C	2579.87	PASS	AB=0.747;AC=18;AF=0.321;AN=56;BaseQRankSum=8.208;DP=579;FS=2.766;HRun=11;HaplotypeScore=67.5273;InbreedingCoeff=0.8341;MQ=60.48;MQ0=6;MQRankSum=3.254;QD=12.29;ReadPosRankSum=2.426;VQSLOD=3.7082;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,1:36:16.66:0,17,217	0/0:6,0:7:11.86:0,12,110	0/0:18,1:5:11.92:0,12,110	0/1:21,1:7:11.66:12,0,48	0/0:28,1:30:53.38:0,53,754	0/0:27,0:27:63.10:0,63,641	0/0:8,0:8:21.05:0,21,224	0/0:16,1:17:20.28:0,20,389	0/0:18,1:19:26.74:0,27,417	1/1:6,15:21:47.86:386,48,0	1/1:4,15:20:34.97:276,35,0	1/1:3,9:12:20.97:172,21,0	0/1:2,10:14:0.94:178,0,1	0/0:20,0:20:51.07:0,51,521	0/0:18,0:18:51.10:0,51,523	0/0:23,0:23:48.12:0,48,510	0/0:34,0:34:49.51:0,50,816	1/1:8,11:18:11.26:205,11,0	0/0:14,0:13:36.02:0,36,360	0/0:26,0:26:73.05:0,73,759	0/0:11,0:11:24.06:0,24,256	1/1:4,25:29:30.90:460,31,0	1/1:5,29:34:51.97:632,52,0	1/1:5,15:20:26.96:222,27,0	1/1:7,12:19:3.97:239,4,0	0/0:20,2:22:18.35:0,18,540	0/0:23,0:25:62.98:0,63,646	0/0:9,0:10:29.91:0,30,302
chr10	73275002	.	C	CT	1127.53	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-4.955;DP=457;FS=14.487;HRun=9;HaplotypeScore=49.8413;InbreedingCoeff=0.8582;MQ=83.22;MQ0=2;MQRankSum=-2.715;QD=21.68;ReadPosRankSum=0.354;VQSLOD=2.9546;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:41.97:0,42,365	0/0:5,0:5:11.99:0,12,104	0/0:26,1:21:19.43:0,19,157	0/0:16,0:14:20.63:0,21,153	0/0:28,0:28:77.63:0,78,658	0/0:14,1:15:5.80:0,6,279	0/0:10,0:10:23.98:0,24,208	0/0:31,0:31:56.89:0,57,488	0/0:21,0:21:59.98:0,60,521	1/1:1,15:16:22.07:472,22,0	1/1:4,17:21:48.09:515,48,0	0/0:11,0:11:26.99:0,27,234	0/0:19,0:19:44.97:0,45,391	0/0:10,0:10:29.97:0,30,255	0/0:12,0:12:35.99:0,36,312	0/0:14,1:15:8.80:0,9,303	0/0:24,0:24:53.95:0,54,465	0/0:10,0:10:29.98:0,30,256	0/0:14,0:14:29.99:0,30,260	0/0:16,0:16:41.98:0,42,365	0/0:5,0:5:15:0,15,130	0/0:5,0:5:15:0,15,130	0/0:14,0:14:35.99:0,36,313	0/0:12,0:12:32.99:0,33,286	1/1:2,13:15:4.03:273,4,0	0/0:17,1:18:17.80:0,18,381	0/0:37,0:37:83.89:0,84,718	0/0:13,0:13:32.99:0,33,286
chr10	73275374	.	C	CA	2675.69	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.821;DP=579;FS=9.121;HRun=1;HaplotypeScore=73.4695;InbreedingCoeff=0.9056;MQ=94.86;MQ0=0;MQRankSum=-1.086;QD=41.81;ReadPosRankSum=2.679;VQSLOD=3.8640;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.29:0,90,1241	0/0:4,0:4:12.04:0,12,168	0/0:27,0:27:72.19:0,72,958	0/0:28,0:28:75.17:0,75,970	0/0:25,0:25:63.21:0,63,879	0/0:26,0:26:78.24:0,78,1073	0/0:19,0:19:54.18:0,54,754	0/0:40,0:40:99:0,120,1678	0/0:20,0:20:60.20:0,60,837	1/1:1,23:24:72.24:1140,72,0	1/1:1,18:19:51.17:814,51,0	0/0:15,0:15:45.15:0,45,628	0/0:11,0:11:33.11:0,33,458	0/0:14,0:14:36.12:0,36,502	0/0:13,0:13:36.12:0,36,503	0/0:17,0:17:51.17:0,51,713	0/0:28,0:28:84.26:0,84,1157	0/0:19,0:19:54.18:0,54,752	0/0:13,0:13:36.12:0,36,503	0/0:21,0:21:63.21:0,63,881	0/0:36,0:36:99:0,108,1510	0/0:16,0:16:45.15:0,45,629	0/0:12,0:12:30.10:0,30,419	0/0:20,0:20:60.20:0,60,839	1/1:0,21:21:54.18:863,54,0	0/0:15,1:16:0.28:0,0,582	0/0:32,0:31:87.28:0,87,1197	0/0:13,0:13:33.11:0,33,462
chr10	73276277	.	A	AT	1846.38	PASS	AB=0.896;AC=20;AF=0.357;AN=56;BaseQRankSum=2.951;DP=489;FS=7.388;HRun=10;HaplotypeScore=59.6165;InbreedingCoeff=0.7231;MQ=67.46;MQ0=7;MQRankSum=0.106;QD=8.88;ReadPosRankSum=1.728;VQSLOD=1.8102;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:74.87:0,75,616	0/0:10,0:10:20.97:0,21,172	0/0:19,0:12:20.34:0,20,134	0/1:20,0:15:5.09:5,0,62	0/0:29,0:29:56.88:0,57,467	0/0:22,0:22:56.92:0,57,467	0/0:13,0:13:17.94:0,18,148	0/0:34,0:34:65.83:0,66,529	0/0:12,0:12:29.96:0,30,246	1/1:1,20:22:59.98:621,60,0	1/1:5,12:17:30.04:308,30,0	1/1:4,1:15:23.02:137,23,0	1/1:1,0:15:28.43:142,28,0	0/0:13,0:13:29.93:0,30,242	0/0:9,0:9:23.94:0,24,191	0/0:12,0:12:26.96:0,27,222	0/1:16,4:20:22.05:22,0,247	0/0:16,0:16:44.93:0,45,369	0/0:16,1:17:9.99:0,10,288	0/0:15,0:15:32.95:0,33,271	0/1:7,2:9:40.02:40,0,120	1/1:7,0:15:22.72:119,23,0	1/1:6,0:17:22.99:126,23,0	1/1:4,0:25:39.49:204,39,0	1/1:4,12:16:11.46:327,11,0	0/1:12,1:14:0.01:0,0,193	0/0:20,0:20:47.92:0,48,394	0/0:8,0:8:14.98:0,15,123
chr10	73277174	.	AACCCC	A	2232.77	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=3.703;DP=432;FS=25.006;HRun=0;HaplotypeScore=95.2263;InbreedingCoeff=0.9070;MQ=79.14;MQ0=16;MQRankSum=-6.496;QD=37.84;ReadPosRankSum=4.349;VQSLOD=1.7526;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:15.47:0,15,281	0/0:6,0:6:18.02:0,18,417	0/0:84,0:32:86.73:0,87,1437	0/0:88,1:32:68.21:0,68,1027	0/0:12,0:12:32.99:0,33,785	0/0:15,0:15:45.07:0,45,1220	0/0:12,0:12:30.03:0,30,862	0/0:13,0:13:36.10:0,36,864	0/0:12,0:12:36:0,36,789	1/1:2,7:9:27.07:481,27,0	1/1:3,4:7:15.01:260,15,0	1/1:5,8:13:38.97:696,39,0	1/1:1,6:7:18.06:374,18,0	0/0:14,0:14:37.01:0,37,1054	0/0:11,0:11:33.07:0,33,901	0/0:13,0:13:38.98:0,39,754	0/0:16,0:16:39:0,39,1042	0/0:7,0:7:21.04:0,21,559	0/0:15,0:15:42.09:0,42,900	0/0:13,0:14:35.67:0,36,919	0/0:8,0:8:20.98:0,21,350	1/1:1,1:6:3.01:62,3,0	1/1:1,2:8:12.04:235,12,0	1/1:1,2:3:6.02:131,6,0	1/1:0,4:4:9.03:187,9,0	0/0:6,0:6:15.02:0,15,337	0/0:14,0:14:39.08:0,39,1022	0/0:2,0:2:6.02:0,6,175
chr10	73280694	.	G	GA	861.31	PASS	AB=0.819;AC=11;AF=0.196;AN=56;BaseQRankSum=-4.351;DP=616;FS=0.508;HRun=13;HaplotypeScore=81.5972;InbreedingCoeff=0.3894;MQ=81.75;MQ0=0;MQRankSum=1.275;QD=4.76;ReadPosRankSum=-2.105;VQSLOD=1.5846;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:5,5:10:7.21:73,0,7	0/0:14,0:15:28.70:0,29,188	0/0:34,0:27:11.02:0,11,99	0/1:23,0:17:12.02:12,0,16	0/0:32,2:38:2.71:0,3,362	0/1:27,2:31:9.41:9,0,331	0/0:10,0:12:25.80:0,26,167	0/0:18,0:20:39.64:0,40,255	0/0:17,0:19:16.48:0,16,210	1/1:10,15:25:6.76:319,7,0	1/1:11,20:31:18.18:401,18,0	0/0:15,0:16:28.66:0,29,186	0/0:26,0:26:53.30:0,53,362	0/0:17,0:19:24.74:0,25,154	0/0:16,0:16:23.69:0,24,160	0/0:15,0:16:6.92:0,7,153	0/0:23,0:23:49.44:0,49,314	0/1:5,9:15:59.10:110,0,59	0/0:20,0:23:44.68:0,45,281	0/0:34,0:35:66.78:0,67,441	0/0:19,0:19:13.07:0,13,195	0/0:29,1:30:31.47:0,31,353	0/0:34,0:34:46.05:0,46,312	0/0:9,0:10:8.29:0,8,131	1/1:8,8:15:9.01:84,9,0	0/1:26,3:29:3.71:4,0,242	0/0:20,1:22:18.52:0,19,251	0/0:7,0:8:16.82:0,17,105
chr10	73281058	.	T	TA	5204.29	PASS	AB=0.896;AC=20;AF=0.357;AN=56;BaseQRankSum=-10.991;DP=566;FS=9.753;HRun=8;HaplotypeScore=50.9344;InbreedingCoeff=0.8457;MQ=79.35;MQ0=0;MQRankSum=-0.041;QD=25.51;ReadPosRankSum=0.733;VQSLOD=5.2070;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:57.03:0,57,521	0/0:2,0:2:6:0,6,55	0/0:14,0:14:32.94:0,33,291	0/0:15,0:14:22.69:0,23,212	0/0:31,0:31:81.03:0,81,741	0/0:24,0:25:53.06:0,53,473	0/0:17,0:17:36.01:0,36,329	0/0:29,0:29:69:0,69,625	0/0:30,0:30:60.03:0,60,549	1/1:3,27:30:81.24:935,81,0	1/1:7,27:35:81.07:914,81,0	1/1:2,17:19:11.65:386,12,0	1/1:2,19:21:51.15:582,51,0	0/1:10,1:11:4.60:5,0,217	0/0:25,0:25:72.04:0,72,659	0/0:21,0:21:48:0,48,430	0/0:25,0:26:65.07:0,65,583	1/1:1,14:15:42.12:485,42,0	0/0:10,0:10:24:0,24,216	0/0:23,0:23:60.02:0,60,549	0/0:11,0:11:30.02:0,30,275	1/1:3,16:19:45.13:519,45,0	1/1:1,15:17:44.97:499,45,0	1/1:1,15:16:39.12:450,39,0	1/1:1,13:14:36.11:415,36,0	0/0:31,0:31:81.03:0,81,741	0/0:28,1:29:40.44:0,40,624	0/1:6,1:7:13.60:14,0,144
chr10	73281340	.	TA	T	766.26	PASS	AB=0.933;AC=15;AF=0.268;AN=56;BaseQRankSum=1.821;DP=469;FS=5.414;HRun=14;HaplotypeScore=56.1648;InbreedingCoeff=0.7220;MQ=55.09;MQ0=13;MQRankSum=1.471;QD=7.44;ReadPosRankSum=4.231;VQSLOD=2.5215;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:25:48.63:0,49,266	0/1:8,1:9:8.58:9,0,68	0/0:8,0:7:8.81:0,9,61	0/1:4,0:2:14.41:14,0,15	0/0:26,0:25:66.06:0,66,609	0/0:14,1:15:18.29:0,18,297	0/0:11,0:11:30.01:0,30,273	0/0:27,0:25:47.81:0,48,411	0/0:17,0:17:45.93:0,46,415	0/0:10,0:21:38.79:0,39,215	0/0:4,0:19:34.13:0,34,193	1/1:2,12:14:23.80:164,24,0	1/1:4,11:15:26.75:185,27,0	0/0:14,0:14:22.97:0,23,207	0/0:22,0:21:45.05:0,45,417	0/0:15,0:15:21.50:0,21,196	0/0:25,1:26:33.09:0,33,420	1/1:6,19:23:13.97:289,14,0	0/0:24,0:23:38.28:0,38,321	0/0:16,1:17:6.45:0,6,203	0/1:8,1:8:2.59:3,0,110	1/1:1,3:4:11.89:82,12,0	1/1:6,6:12:14.84:103,15,0	1/1:5,6:9:14.87:103,15,0	0/0:6,0:26:34.41:0,34,184	0/0:19,0:20:24.27:0,24,330	0/0:19,1:19:35.16:0,35,438	0/0:6,0:4:12.01:0,12,111
chr10	73282698	.	CT	C	1419.82	PASS	AC=10;AF=0.208;AN=48;BaseQRankSum=9.083;DP=467;FS=0.475;HRun=11;HaplotypeScore=58.6251;InbreedingCoeff=0.9034;MQ=70.39;MQ0=8;MQRankSum=1.557;QD=13.15;ReadPosRankSum=2.497;VQSLOD=3.6034;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,40:47:62.91:713,63,0	0/0:4,0:4:5.98:0,6,53	0/0:23,0:15:22.14:0,22,175	0/0:19,1:15:6.05:0,6,91	0/0:24,0:24:23.66:0,24,443	0/0:18,1:19:23.44:0,23,434	0/0:17,0:17:39.06:0,39,404	0/0:30,0:30:72.11:0,72,742	0/0:15,1:17:20.28:0,20,381	1/1:3,10:12:26.96:221,27,0	1/1:6,8:13:29.82:232,30,0	./.	0/0:4,0:1:0.89:0,1,2	0/0:17,0:17:27.07:0,27,285	0/0:22,1:22:35.51:0,36,583	0/0:8,0:8:18:0,18,177	0/0:29,0:29:72.62:0,73,752	1/1:2,16:17:32.96:271,33,0	0/0:24,0:24:57.12:0,57,589	0/0:17,0:18:32.53:0,33,401	0/0:23,0:22:51.10:0,51,528	./.	./.	./.	1/1:5,10:15:17.85:148,18,0	0/0:30,2:32:19.86:0,20,605	0/0:14,0:15:23.13:0,23,270	0/0:6,0:6:15.04:0,15,160
chr10	73283150	.	ATT	A	605.10	PASS	AB=0.556;AC=7;AF=0.125;AN=56;BaseQRankSum=6.569;DP=483;FS=0.867;HRun=3;HaplotypeScore=62.1034;InbreedingCoeff=0.8436;MQ=67.95;MQ0=0;MQRankSum=-7.281;QD=21.61;ReadPosRankSum=-1.191;VQSLOD=1.0419;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:75.21:0,75,1388	0/0:5,0:5:15.04:0,15,252	0/0:8,0:8:23.82:0,24,362	0/0:6,0:6:11.52:0,12,148	0/0:35,0:35:99:0,105,1956	0/0:25,0:25:72.24:0,72,1352	0/0:7,0:7:18.05:0,18,316	0/0:34,0:34:99:0,99,1871	0/0:14,0:14:42.13:0,42,777	0/0:27,0:27:81.23:0,81,1496	0/0:30,0:30:90.31:0,90,1700	1/1:4,6:10:14.32:262,14,0	1/1:0,5:5:15.05:201,15,0	0/0:12,0:12:36.12:0,36,684	0/0:19,0:19:57.20:0,57,1101	0/0:16,0:16:48.16:0,48,921	0/0:16,0:16:48.13:0,48,838	0/0:11,0:10:27.09:0,27,503	0/0:21,0:21:57.16:0,57,1014	0/0:24,0:24:69.24:0,69,1325	0/0:19,0:19:57.20:0,57,1078	0/0:3,1:4:0.71:0,1,3	1/1:1,7:8:18.06:244,18,0	0/1:1,4:5:0.88:41,0,1	0/0:30,0:30:90.25:0,90,1617	0/0:24,0:24:72.25:0,72,1375	0/0:29,0:29:87.24:0,87,1592	0/0:9,0:9:27.07:0,27,457
chr10	73283152	.	T	TATTTAAAATACA	2814.37	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.740;DP=482;FS=3.838;HRun=0;HaplotypeScore=161.0834;InbreedingCoeff=0.9433;MQ=68.06;MQ0=0;MQRankSum=-8.123;QD=82.78;ReadPosRankSum=-0.339;VQSLOD=3.3237;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:72.25:0,72,2469	0/0:5,0:5:15.05:0,15,429	0/0:9,0:9:27.09:0,27,661	0/0:6,0:6:15.01:0,15,276	0/0:34,0:34:99:0,102,3471	0/0:25,0:25:72.25:0,72,2615	0/0:6,0:6:18.06:0,18,568	0/0:33,0:33:96.33:0,96,3424	0/0:14,0:14:42.14:0,42,1528	0/0:28,0:28:84.23:0,84,2918	0/0:30,0:30:90.31:0,90,3375	1/1:6,3:9:17.81:1036,18,0	1/1:5,0:5:15.05:640,15,0	0/0:14,0:14:42.12:0,42,1312	0/0:19,0:19:57.20:0,57,2094	0/0:17,0:17:48.16:0,48,1783	0/0:15,0:15:45.15:0,45,1557	0/0:11,0:10:24.08:0,24,807	0/0:20,0:20:54.17:0,54,1767	0/0:24,0:24:72.23:0,72,2552	0/0:19,0:19:57.20:0,57,1932	1/1:1,3:4:6.02:332,6,0	1/1:8,0:9:21.07:577,21,0	1/1:6,1:7:9.03:392,9,0	0/0:30,0:30:87.26:0,87,2964	0/0:24,0:24:72.25:0,72,2615	0/0:28,0:28:84.25:0,84,3072	0/0:7,0:7:21.07:0,21,757
chr10	73283416	.	TGTTC	T	4318.27	PASS	AB=0.600;AC=15;AF=0.268;AN=56;BaseQRankSum=14.694;DP=799;FS=5.671;HRun=0;HaplotypeScore=140.7714;InbreedingCoeff=0.9157;MQ=65.12;MQ0=2;MQRankSum=-5.670;QD=23.09;ReadPosRankSum=3.348;VQSLOD=4.5557;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,138,3226	0/0:8,0:8:15.05:0,15,369	0/0:37,0:32:44.82:0,45,927	0/0:22,0:22:36.12:0,36,835	0/0:34,0:34:78.25:0,78,1789	0/0:15,0:15:36.12:0,36,862	0/0:28,0:28:56.34:0,56,1258	0/0:30,0:30:44.78:0,45,768	0/0:39,0:39:87.28:0,87,1996	1/1:6,0:30:32.09:468,32,0	0/1:8,0:24:6.59:163,0,7	1/1:9,30:39:69.24:1144,69,0	1/1:4,27:31:54.15:895,54,0	0/0:32,0:32:63.22:0,63,1421	0/0:39,0:39:93.28:0,93,2181	0/0:42,0:42:87.28:0,87,1954	0/0:40,0:40:99:0,99,2337	0/0:21,0:21:51.17:0,51,1168	0/0:22,0:20:29.46:0,29,573	0/0:31,0:31:66.21:0,66,1523	0/0:48,0:48:99:0,111,2521	1/1:4,11:15:30.02:464,30,0	1/1:2,9:11:21.07:348,21,0	1/1:5,15:20:33.11:547,33,0	1/1:3,0:17:18.29:290,18,0	0/0:41,0:41:78.14:0,78,1669	0/0:25,0:25:54.13:0,54,1169	0/0:4,0:4:12.04:0,12,295
chr10	73283608	.	G	GAGC	2699.66	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-4.453;DP=701;FS=6.806;HRun=0;HaplotypeScore=103.1285;InbreedingCoeff=0.9979;MQ=70.07;MQ0=0;MQRankSum=-3.719;QD=44.26;ReadPosRankSum=-1.059;VQSLOD=4.7668;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1639	0/0:9,0:9:23.91:0,24,400	0/0:28,0:27:68.38:0,68,1062	0/0:33,0:27:52.31:0,52,1088	0/0:22,0:22:63.22:0,63,1049	0/0:13,0:13:36.12:0,36,600	0/0:28,0:28:75.23:0,75,1215	0/0:44,0:44:99:0,126,2031	0/0:39,0:39:99:0,114,1898	1/1:3,17:24:60.15:1217,60,0	1/1:6,14:25:42.14:946,42,0	0/0:29,0:29:87.30:0,87,1449	0/0:34,0:34:96.31:0,96,1566	0/0:29,0:29:78.27:0,78,1295	0/0:27,0:27:72.25:0,72,1199	0/0:23,0:23:66.23:0,66,1085	0/0:25,0:25:75.26:0,75,1241	0/0:18,0:18:54.18:0,54,889	0/0:24,0:22:66.21:0,66,1074	0/0:25,0:25:72.23:0,72,1161	0/0:29,0:29:81.24:0,81,1297	0/0:14,0:14:36.12:0,36,600	0/0:16,0:16:48.16:0,48,800	0/0:22,0:22:66.23:0,66,1100	1/1:2,10:12:30.10:679,30,0	0/0:31,1:32:22.63:0,23,1374	0/0:29,0:29:84.29:0,84,1392	0/0:13,0:13:36.12:0,36,600
chr10	73285158	.	GT	G	2474.71	PASS	AB=0.970;AC=22;AF=0.393;AN=56;BaseQRankSum=9.879;DP=467;FS=1.895;HRun=10;HaplotypeScore=51.3260;InbreedingCoeff=0.8563;MQ=68.12;MQ0=2;MQRankSum=-0.882;QD=13.67;ReadPosRankSum=4.066;VQSLOD=3.4816;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:28:5.63:507,6,0	0/0:6,0:6:18.05:0,18,199	0/0:39,0:18:13.03:0,13,148	0/1:29,2:15:1.38:1,0,100	0/0:8,0:8:24.06:0,24,265	0/0:23,0:23:69.01:0,69,736	0/0:21,0:21:60.16:0,60,664	0/0:30,0:33:92.78:0,93,972	0/0:14,0:15:41.95:0,42,446	1/1:2,9:11:26.99:234,27,0	1/1:0,10:10:20.99:182,21,0	1/1:0,9:9:18:156,18,0	1/1:0,11:11:29.99:260,30,0	0/0:15,0:15:39.10:0,39,426	0/0:18,0:18:45.12:0,45,498	0/0:16,0:16:39.11:0,39,431	0/0:21,2:23:22.07:0,22,463	1/1:2,13:15:35.99:313,36,0	0/0:15,0:15:33.07:0,33,351	0/0:11,0:11:27.07:0,27,299	0/1:15,0:15:2.41:2,0,386	1/1:0,5:5:15:130,15,0	1/1:1,10:11:26.99:234,27,0	1/1:2,17:19:44.90:378,45,0	1/1:2,14:16:32.99:286,33,0	0/0:19,0:19:41.48:0,41,439	0/0:13,0:16:44.79:0,45,460	0/0:7,0:7:3.01:0,3,33
chr10	73286491	.	ATT	A	1059.68	PASS	AB=0.732;AC=16;AF=0.286;AN=56;BaseQRankSum=5.442;DP=468;FS=19.716;HRun=15;HaplotypeScore=63.8590;InbreedingCoeff=0.6838;MQ=69.47;MQ0=3;MQRankSum=-0.201;QD=7.41;ReadPosRankSum=3.940;VQSLOD=-0.4236;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:42.02:0,42,383	0/0:11,0:11:30.10:0,30,406	0/0:26,0:15:9.49:0,9,104	0/0:10,0:4:5.90:0,6,38	0/0:30,0:29:49.04:0,49,648	0/0:21,0:22:47.60:0,48,573	0/0:11,0:12:25.87:0,26,294	0/0:19,1:24:14.44:0,14,491	0/0:13,0:15:26.57:0,27,426	1/1:11,7:17:17.74:158,18,0	1/1:11,6:18:11.73:105,12,0	1/1:4,6:13:20.36:156,20,0	0/1:3,9:13:0.85:147,0,1	0/0:8,0:8:21.07:0,21,284	0/0:9,0:9:21.04:0,21,253	0/0:15,0:17:15.69:0,16,386	0/0:27,2:34:28.33:0,28,868	0/1:14,1:15:2.38:2,0,235	0/1:16,3:20:58.10:58,0,102	0/0:13,0:17:5.01:0,5,238	0/0:8,0:8:21.04:0,21,244	1/1:1,6:9:11.56:135,12,0	0/1:4,7:12:3.58:65,0,4	1/1:0,12:13:26.74:223,27,0	1/1:4,7:11:23.71:196,24,0	0/0:21,0:25:42.07:0,42,497	0/0:15,0:17:27.44:0,27,410	0/0:13,1:17:12.10:0,12,341
chr10	73286506	.	T	TC	256.17	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=0.249;DP=429;FS=14.022;HRun=2;HaplotypeScore=61.5807;InbreedingCoeff=0.5862;MQ=61.82;MQ0=3;MQRankSum=0.496;QD=8.01;ReadPosRankSum=0.485;VQSLOD=-0.4621;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:23:36:350,36,0	0/0:11,0:11:27.07:0,27,316	0/0:18,0:10:1.95:0,2,29	0/1:9,0:4:2.21:2,0,42	0/0:24,0:23:31.94:0,32,406	0/0:19,0:19:45.84:0,46,452	0/0:12,0:12:27.43:0,27,263	0/0:23,0:23:45.62:0,46,431	0/0:16,0:16:32.94:0,33,331	0/0:10,0:9:23.56:0,24,161	0/0:18,0:18:41.34:0,41,297	0/0:9,0:9:20.58:0,21,125	0/0:15,0:15:32.41:0,32,212	0/0:10,0:10:18:0,18,173	0/0:13,0:13:23.96:0,24,210	0/0:12,0:12:29.97:0,30,318	0/0:31,0:31:54.92:0,55,611	0/0:10,0:10:20.88:0,21,186	0/0:15,0:15:8.10:0,8,178	0/0:19,0:19:50.79:0,51,458	0/0:8,0:8:11.96:0,12,121	0/0:14,0:14:38.53:0,39,273	0/0:10,0:9:17.70:0,18,112	0/0:16,0:16:35.37:0,35,237	0/0:11,0:11:32.36:0,32,215	0/0:22,0:22:51.69:0,52,490	0/0:17,0:16:35.43:0,35,286	0/0:13,0:12:24.02:0,24,215
chr10	73287900	.	TAAA	T	1769.99	PASS	AB=0.609;AC=8;AF=0.143;AN=56;BaseQRankSum=3.946;DP=645;FS=0.000;HRun=15;HaplotypeScore=106.3894;InbreedingCoeff=0.6483;MQ=70.60;MQ0=1;MQRankSum=-1.791;QD=13.83;ReadPosRankSum=3.713;VQSLOD=1.9661;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:34:93.11:0,93,1374	0/0:9,0:9:24.07:0,24,402	0/0:20,0:14:20.96:0,21,247	0/0:11,0:10:17.39:0,17,157	0/0:32,0:32:91.06:0,91,1324	0/0:14,0:16:39.07:0,39,528	0/0:13,0:13:27.09:0,27,466	0/0:36,0:36:66.13:0,66,943	0/0:21,0:26:66.20:0,66,1112	1/1:7,22:30:67.55:745,68,0	1/1:5,20:26:50.67:542,51,0	0/1:10,1:27:29.98:30,0,55	0/0:7,0:22:25.68:0,26,132	0/0:26,0:28:78.15:0,78,1246	0/0:31,0:32:90.29:0,90,1554	0/0:19,0:21:54.16:0,54,968	0/0:19,0:23:41.02:0,41,901	0/0:9,0:11:27.07:0,27,429	0/0:24,0:24:48.61:0,49,784	0/0:34,0:37:97.02:0,97,1310	0/0:18,0:18:48.05:0,48,633	0/0:5,0:12:0.87:0,1,36	0/1:8,1:23:14.16:14,0,37	0/0:1,0:11:11.21:0,11,25	1/1:3,19:22:54.07:592,54,0	0/0:27,0:30:80.18:0,80,1210	0/0:40,0:42:99:0,109,1820	0/0:4,0:6:15.04:0,15,233
chr10	73289051	.	GT	G	2629.32	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.713;DP=501;FS=13.131;HRun=2;HaplotypeScore=58.8709;InbreedingCoeff=0.9951;MQ=74.37;MQ0=1;MQRankSum=-0.800;QD=33.28;ReadPosRankSum=2.910;VQSLOD=2.6890;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.23:0,81,1188	0/0:6,0:6:18.06:0,18,269	0/0:9,0:9:26.98:0,27,345	0/0:9,0:9:24.07:0,24,337	0/0:31,0:31:90.30:0,90,1347	0/0:27,0:27:81.26:0,81,1193	0/0:9,0:9:27.09:0,27,405	0/0:35,0:35:99:0,105,1556	0/0:22,0:22:63.21:0,63,936	0/0:22,0:22:66.22:0,66,963	0/0:21,0:21:63.13:0,63,898	1/1:0,18:18:45.15:584,45,0	1/1:0,11:11:30.10:390,30,0	0/0:11,0:11:33.11:0,33,494	0/0:22,0:22:66.21:0,66,968	0/0:15,0:15:45.15:0,45,674	0/0:15,0:15:42.14:0,42,630	0/0:14,0:14:36.09:0,36,514	0/0:16,0:16:48.16:0,48,720	0/0:20,0:20:60.20:0,60,899	0/0:17,0:17:45.15:0,45,674	1/1:1,15:16:45.15:584,45,0	1/1:0,27:27:75.24:974,75,0	1/1:0,7:7:21.07:273,21,0	0/0:22,0:21:54.16:0,54,771	0/0:20,0:20:60.20:0,60,898	0/0:23,0:23:69.22:0,69,1012	0/0:7,0:7:21.07:0,21,315
chr10	73289069	.	AGTTT	A	2860.41	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.329;DP=477;FS=8.705;HRun=0;HaplotypeScore=84.4727;InbreedingCoeff=0.9870;MQ=76.64;MQ0=1;MQRankSum=-0.332;QD=51.08;ReadPosRankSum=2.679;VQSLOD=4.5358;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.30:0,87,2424	0/0:7,0:7:21.07:0,21,571	0/0:10,0:10:30.07:0,30,554	0/0:10,0:10:22.86:0,23,607	0/0:29,0:29:87.28:0,87,2373	0/0:24,0:24:72.25:0,72,2073	0/0:6,0:6:18.04:0,18,422	0/0:33,0:33:99:0,99,2453	0/0:21,0:21:60.19:0,60,1657	1/1:0,22:22:66.16:1229,66,0	1/1:0,18:18:48.08:959,48,0	0/0:17,0:17:45.12:0,45,1155	0/0:14,0:14:39.09:0,39,851	0/0:13,0:13:36.12:0,36,985	0/0:21,0:21:63.20:0,63,1710	0/0:16,0:16:48.14:0,48,1240	0/0:15,0:15:45.14:0,45,1211	0/0:17,0:17:42.14:0,42,1116	0/0:14,0:14:42.12:0,42,1055	0/0:22,0:22:66.19:0,66,1772	0/0:9,0:9:27.09:0,27,742	0/0:15,0:15:45.14:0,45,1202	0/0:27,0:27:75.22:0,75,1911	0/0:5,0:5:15.05:0,15,421	1/1:0,16:15:39.13:815,39,0	0/0:19,0:19:57.18:0,57,1514	0/0:21,0:21:63.18:0,63,1586	0/0:7,0:7:21.07:0,21,597
chr10	73289212	.	A	AT	532.72	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.194;DP=455;FS=3.770;HRun=1;HaplotypeScore=45.0403;InbreedingCoeff=0.8345;MQ=67.17;MQ0=0;MQRankSum=0.154;QD=35.51;ReadPosRankSum=1.505;VQSLOD=3.4832;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:42.14:627,42,0	0/0:13,0:13:39.11:0,39,488	0/0:9,0:8:21.03:0,21,247	0/0:2,0:2:4.26:0,4,40	0/0:33,0:33:87.27:0,87,1114	0/0:17,0:17:51.17:0,51,659	0/0:11,0:11:33.09:0,33,413	0/0:22,0:22:63.18:0,63,780	0/0:18,0:18:48.13:0,48,601	0/0:13,0:13:39.12:0,39,492	0/0:34,0:34:99:0,99,1253	0/0:10,0:10:26.74:0,27,186	0/0:18,0:18:53.36:0,53,355	0/0:13,0:13:36.12:0,36,466	0/0:14,0:14:39.11:0,39,489	0/0:14,0:14:42.12:0,42,518	0/0:20,0:20:57.15:0,57,707	0/0:10,0:10:30.06:0,30,356	0/0:20,0:20:60.14:0,60,702	0/0:19,0:19:54.12:0,54,634	0/0:5,0:5:15.05:0,15,194	0/0:13,0:13:35.61:0,36,237	0/0:12,0:12:35.64:0,36,244	0/0:4,0:4:11.90:0,12,85	0/0:23,0:23:69.20:0,69,855	0/0:24,0:24:72.15:0,72,875	0/0:30,0:30:87.25:0,87,1097	0/0:19,0:19:57.17:0,57,723
chr10	73289213	.	TA	T	1306.41	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.948;DP=452;FS=4.313;HRun=8;HaplotypeScore=41.7534;InbreedingCoeff=0.9527;MQ=67.22;MQ0=0;MQRankSum=-0.322;QD=22.92;ReadPosRankSum=1.748;VQSLOD=4.0217;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:40.64:0,41,223	0/0:13,0:13:36.11:0,36,435	0/0:9,0:8:20.26:0,20,203	0/0:2,0:2:5.14:0,5,24	0/0:31,0:31:90.28:0,90,1085	0/0:17,0:17:51.16:0,51,615	0/0:11,0:11:30.09:0,30,362	0/0:22,0:22:60.17:0,60,714	0/0:18,0:18:48.11:0,48,563	0/0:14,0:14:42.12:0,42,497	0/0:33,0:33:93.29:0,93,1123	1/1:1,9:10:24.03:232,24,0	1/1:1,17:18:51.08:492,51,0	0/0:13,0:13:36.11:0,36,435	0/0:13,0:13:36.11:0,36,434	0/0:15,0:15:39.11:0,39,460	0/0:19,0:19:51.16:0,51,616	0/0:10,0:10:27.08:0,27,325	0/0:20,0:20:45.13:0,45,533	0/0:18,0:18:39.12:0,39,471	0/0:5,0:5:15.05:0,15,181	1/1:0,13:13:36.06:348,36,0	1/1:1,11:12:33.05:319,33,0	1/1:1,3:4:9.01:87,9,0	0/0:23,0:23:60.18:0,60,723	0/0:26,0:26:63.18:0,63,747	0/0:29,0:29:81.25:0,81,978	0/0:19,0:19:54.17:0,54,652
chr10	73289989	.	T	TTAA	160.83	PASS	AB=0.944;AC=9;AF=0.196;AN=46;BaseQRankSum=0.865;DP=152;FS=3.252;HRun=0;HaplotypeScore=21.4967;InbreedingCoeff=0.3601;MQ=65.31;MQ0=3;MQRankSum=-2.553;QD=4.60;ReadPosRankSum=2.318;VQSLOD=0.5474;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:9:2.92:0,3,17	./.	./.	./.	0/0:7,0:7:9.03:0,9,119	0/0:8,0:8:15.05:0,15,199	0/0:1,0:1:3.01:0,3,40	0/0:29,0:28:15.02:0,15,161	0/0:4,0:4:9.03:0,9,118	1/1:4,0:5:3.01:39,3,0	1/1:4,0:5:3.01:39,3,0	0/0:5,0:5:6.02:0,6,79	0/0:5,0:5:9.03:0,9,118	0/0:4,0:4:9.03:0,9,119	0/0:6,0:6:9.02:0,9,104	0/0:1,0:1:3.01:0,3,39	0/1:15,1:17:34.91:35,0,255	1/1:3,0:3:5.88:54,6,0	0/0:4,0:4:3.01:0,3,40	0/0:4,0:4:9.03:0,9,119	./.	./.	0/0:1,0:1:3.01:0,3,40	0/0:2,0:2:3.01:0,3,40	1/1:1,3:4:6.02:116,6,0	0/0:4,0:4:9.03:0,9,119	0/0:2,0:2:3.01:0,3,40	0/0:8,0:8:15.05:0,15,194
chr10	73290523	.	G	GA	7416.93	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=18.760;DP=641;FS=4.852;HRun=5;HaplotypeScore=97.1107;InbreedingCoeff=0.9974;MQ=76.04;MQ0=0;MQRankSum=-8.484;QD=34.50;ReadPosRankSum=0.618;VQSLOD=4.5411;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:69.22:908,69,0	0/0:12,0:12:33.08:0,33,354	0/0:19,0:19:48.12:0,48,515	0/0:10,0:10:18.03:0,18,184	0/0:38,0:38:99:0,102,1096	0/0:24,0:24:72.18:0,72,774	0/0:15,0:15:39.10:0,39,419	0/0:29,0:29:72.15:0,72,758	0/0:19,0:19:54.14:0,54,580	1/1:6,32:38:99:1420,108,0	1/1:2,22:24:63.20:828,63,0	1/1:2,16:18:48.11:612,48,0	1/1:5,26:31:84.21:1056,84,0	0/0:22,0:22:60.15:0,60,645	0/0:29,0:29:87.22:0,87,935	0/0:31,0:31:87.20:0,87,926	0/0:16,0:16:42.11:0,42,451	1/1:2,8:10:27.05:337,27,0	0/0:24,0:24:48.12:0,48,516	0/0:30,0:30:87.22:0,87,935	0/0:18,0:18:48.12:0,48,516	1/1:0,19:19:45.15:592,45,0	1/1:4,16:20:51.12:651,51,0	1/1:2,8:10:21.07:276,21,0	1/1:3,18:21:57.18:738,57,0	0/0:40,0:40:99:0,120,1289	0/0:43,0:42:99:0,123,1313	0/0:7,0:7:21.05:0,21,226
chr10	73290571	.	G	GAA	7948.11	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=0.184;DP=595;FS=2.922;HRun=6;HaplotypeScore=92.4044;InbreedingCoeff=0.9919;MQ=73.08;MQ0=2;MQRankSum=-7.359;QD=40.76;ReadPosRankSum=0.899;VQSLOD=4.1114;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.18:0,63,755	0/0:10,0:10:30.08:0,30,354	0/0:19,0:19:48.05:0,48,545	0/0:6,0:6:15.04:0,15,178	0/0:35,0:35:93.28:0,93,1134	0/0:24,0:24:69.21:0,69,841	0/0:15,0:15:36.11:0,36,439	0/0:32,0:32:87.26:0,87,1050	0/0:16,0:16:42.13:0,42,505	1/1:8,28:37:84.24:1387,84,0	1/1:3,22:24:60.16:972,60,0	1/1:2,24:27:75.24:1242,75,0	1/1:2,22:24:66.23:1116,66,0	0/0:16,0:16:45.14:0,45,549	0/0:31,0:31:81.23:0,81,976	0/0:24,0:24:69.17:0,69,805	0/0:17,0:17:45.14:0,45,549	0/0:14,0:14:42.06:0,42,493	0/0:16,0:16:39.12:0,39,476	0/0:34,0:34:99:0,102,1207	0/0:12,0:12:27.08:0,27,329	1/1:3,16:19:48.08:738,48,0	1/1:5,21:28:68.63:1061,69,0	1/1:1,10:12:33.11:545,33,0	1/1:3,18:22:59.60:888,60,0	0/0:22,0:22:60.18:0,60,722	0/0:28,0:26:75.21:0,75,901	0/0:6,0:6:12.04:0,12,144
chr10	73291383	.	T	TA	1263.75	PASS	AB=1.000;AC=18;AF=0.333;AN=54;BaseQRankSum=-2.318;DP=456;FS=29.771;HRun=11;HaplotypeScore=47.1326;InbreedingCoeff=0.7765;MQ=51.64;MQ0=31;MQRankSum=2.230;QD=7.52;ReadPosRankSum=0.211;VQSLOD=0.0090;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,21:30:23.61:243,24,0	0/0:4,0:4:11.95:0,12,93	1/1:25,0:3:6.01:17,6,0	0/0:18,0:9:6.41:0,6,51	0/0:35,0:32:73.35:0,73,540	0/0:22,0:21:43.76:0,44,322	0/0:7,0:7:17.91:0,18,136	0/0:41,0:30:56.31:0,56,417	0/0:10,0:11:28.90:0,29,210	1/1:2,15:17:42.50:405,43,0	1/1:8,8:13:18:170,18,0	1/1:2,13:15:18.04:182,18,0	1/1:7,6:11:17.87:165,18,0	0/0:9,0:8:11.89:0,12,88	0/0:18,0:17:41.76:0,42,315	0/0:12,0:12:26.90:0,27,209	0/0:26,0:26:38.75:0,39,296	0/0:12,0:8:4.70:0,5,21	0/1:19,0:17:15.50:16,0,211	0/0:7,0:7:17.75:0,18,124	0/0:5,0:4:5.98:0,6,46	./.	0/1:7,0:7:0:0,0,0	1/1:2,4:5:3.01:30,3,0	1/1:4,11:15:23.99:223,24,0	0/0:30,0:28:71.04:0,71,523	0/0:19,0:14:29.78:0,30,223	0/0:11,0:9:23.63:0,24,168
chr10	73291816	.	G	GA	395.74	PASS	AB=0.813;AC=12;AF=0.333;AN=36;BaseQRankSum=-3.042;DP=104;FS=11.817;HRun=2;HaplotypeScore=84.5660;InbreedingCoeff=-0.2218;MQ=29.64;MQ0=2;MQRankSum=-1.245;QD=6.18;ReadPosRankSum=2.212;VQSLOD=-0.3898;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:1.74:6,2,0	1/1:0,1:1:3.01:41,3,0	./.	./.	0/0:6,0:6:14.35:0,14,141	0/0:7,0:6:3.59:0,4,67	0/1:5,2:7:60.72:61,0,82	0/0:3,0:3:3.01:0,3,34	0/1:6,1:7:40.45:40,0,87	./.	./.	./.	./.	0/0:9,0:8:20.99:0,21,187	0/1:6,1:7:19.97:20,0,125	0/1:4,3:7:81.46:99,0,81	0/0:5,0:5:11.89:0,12,113	0/0:1,0:1:0:0,0,0	0/1:8,1:8:20.51:21,0,142	0/1:4,1:5:25.05:25,0,92	0/0:3,0:1:3.01:0,3,35	./.	./.	./.	./.	0/1:5,5:10:86.13:179,0,86	0/1:6,1:7:19.27:19,0,128	0/0:5,0:5:7.25:0,7,65
chr10	73291825	.	AAG	A	820.61	PASS	AB=0.865;AC=14;AF=0.389;AN=36;BaseQRankSum=0.217;DP=126;FS=2.448;HRun=0;HaplotypeScore=82.0726;InbreedingCoeff=-0.3837;MQ=31.00;MQ0=7;MQRankSum=-2.444;QD=9.12;ReadPosRankSum=1.813;VQSLOD=3.3646;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:3:26,3,0	1/1:0,1:1:3.01:48,3,0	./.	./.	0/1:6,0:6:33.94:34,0,164	0/1:6,0:5:46.26:46,0,50	0/1:6,2:8:99:131,0,194	0/0:6,0:5:12.04:0,12,242	0/1:7,3:9:99:109,0,280	./.	./.	./.	./.	0/0:11,0:10:5.47:0,5,445	0/1:7,1:8:23.55:24,0,305	0/1:5,3:8:99:126,0,123	0/0:6,0:6:0:0,0,286	0/0:1,0:1:1.55:0,2,4	0/1:11,1:8:25.36:25,0,347	0/1:7,1:8:91.04:91,0,196	0/0:3,0:1:3.01:0,3,61	./.	./.	./.	./.	0/1:9,4:13:99:197,0,272	0/1:6,1:7:81.73:82,0,151	0/0:5,0:5:11.84:0,12,157
chr10	73292479	.	G	GA	1586.08	PASS	AB=0.860;AC=12;AF=0.214;AN=56;BaseQRankSum=5.129;DP=640;FS=4.913;HRun=11;HaplotypeScore=83.7576;InbreedingCoeff=0.6030;MQ=63.09;MQ0=4;MQRankSum=2.141;QD=10.17;ReadPosRankSum=1.537;VQSLOD=3.1893;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,3:57:48.85:0,49,864	0/0:6,0:8:19:0,19,128	0/1:19,1:5:11.29:11,0,34	0/0:12,0:6:14.87:0,15,108	0/0:19,0:20:17.45:0,17,302	0/0:15,0:15:30.53:0,31,252	0/1:14,1:16:0.60:1,0,179	0/0:26,1:27:32.10:0,32,422	0/0:22,0:22:46.78:0,47,345	0/0:31,0:31:68.70:0,69,534	0/0:22,1:25:13.34:0,13,275	1/1:7,12:19:12.83:308,13,0	1/1:5,8:13:6.79:239,7,0	0/0:27,0:27:63:0,63,476	0/0:13,0:13:35.85:0,36,276	0/0:25,2:27:26.29:0,26,385	0/0:33,1:34:56.17:0,56,614	0/1:20,2:23:5.06:5,0,321	0/0:25,1:25:11.24:0,11,260	0/0:24,0:28:57.20:0,57,402	0/0:26,1:27:32.31:0,32,434	0/1:8,12:20:7.39:296,0,7	1/1:5,11:17:27.01:264,27,0	1/1:3,25:28:25.67:624,26,0	0/0:19,1:20:17.36:0,17,316	0/0:18,1:20:8.66:0,9,234	0/0:30,0:33:78.66:0,79,580	0/0:11,0:10:23.90:0,24,186
chr10	73293654	.	GT	G	3055.10	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.728;DP=564;FS=7.250;HRun=2;HaplotypeScore=52.2354;InbreedingCoeff=0.9948;MQ=82.44;MQ0=0;MQRankSum=0.678;QD=35.52;ReadPosRankSum=4.230;VQSLOD=3.8660;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.14:0,51,721	0/0:6,0:6:18.06:0,18,270	0/0:20,0:20:57.03:0,57,743	0/0:10,0:10:27.09:0,27,381	0/0:31,0:31:93.27:0,93,1317	0/0:29,0:29:87.25:0,87,1226	0/0:9,0:9:23.97:0,24,331	0/0:29,0:29:81.25:0,81,1162	0/0:22,0:22:66.21:0,66,965	1/1:0,29:29:87.22:1095,87,0	1/1:0,27:27:81.26:1051,81,0	0/0:19,0:19:54.18:0,54,809	0/0:20,0:20:60.20:0,60,898	0/0:18,0:18:54.18:0,54,809	0/0:22,0:22:63.21:0,63,944	0/0:12,0:12:36.12:0,36,531	0/0:32,0:32:93.29:0,93,1354	0/0:9,0:9:27.09:0,27,388	0/0:21,0:21:63.21:0,63,927	0/0:30,0:30:87.25:0,87,1243	0/0:9,0:9:27.09:0,27,405	0/0:18,0:18:54.17:0,54,791	0/0:30,0:30:84.28:0,84,1258	0/0:11,0:11:33.09:0,33,473	1/1:0,30:30:81.26:1051,81,0	0/0:27,0:27:81.24:0,81,1124	0/0:18,0:18:54.18:0,54,809	0/0:9,0:9:27.09:0,27,404
chr10	73294569	.	GGATCTATGAA	G	4816.28	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.388;DP=520;FS=8.833;HRun=0;HaplotypeScore=153.6559;InbreedingCoeff=0.9891;MQ=91.00;MQ0=0;MQRankSum=-10.215;QD=81.63;ReadPosRankSum=0.701;VQSLOD=4.1218;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:45.15:0,45,2390	0/0:5,0:5:15.05:0,15,731	0/0:27,0:27:75.22:0,75,3239	0/0:21,0:21:63.19:0,63,2685	0/0:20,0:20:60.21:0,60,2884	0/0:19,0:19:54.19:0,54,2789	0/0:18,0:18:51.18:0,51,2657	0/0:25,0:25:72.25:0,72,3477	0/0:17,0:17:48.15:0,48,2404	1/1:0,19:19:57.15:1777,57,0	1/1:2,23:25:60.12:1839,60,0	0/0:23,0:23:66.23:0,66,3381	0/0:18,0:18:54.19:0,54,2836	0/0:21,0:21:63.22:0,63,3272	0/0:23,0:23:63.22:0,63,3276	0/0:19,0:19:54.19:0,54,2741	0/0:15,0:14:42.14:0,42,2112	0/0:11,0:11:30.10:0,30,1590	0/0:17,0:17:51.18:0,51,2300	0/0:33,0:33:93.32:0,93,4810	0/0:22,0:22:63.22:0,63,3178	0/0:8,0:8:21.07:0,21,1121	0/0:21,0:21:63.22:0,63,3277	0/0:7,0:7:18.06:0,18,961	1/1:2,13:15:36.12:1200,36,0	0/0:18,0:18:54.19:0,54,2829	0/0:26,0:25:75.26:0,75,3725	0/0:8,0:8:24.08:0,24,1280
chr10	73294767	.	AAT	A	433.38	PASS	AB=0.959;AC=20;AF=0.357;AN=56;BaseQRankSum=9.430;DP=532;FS=2.605;HRun=0;HaplotypeScore=121.4201;InbreedingCoeff=0.4448;MQ=53.99;MQ0=30;MQRankSum=-6.577;QD=2.17;ReadPosRankSum=-2.797;VQSLOD=2.0563;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,4:12:22.98:23,0,36	0/0:8,0:8:24.08:0,24,392	0/0:108,0:17:16.36:0,16,170	0/1:100,1:25:7.33:7,0,239	0/0:23,0:22:62.50:0,62,868	0/0:15,0:15:39.60:0,40,611	0/0:11,0:11:24.03:0,24,340	0/0:20,0:19:23.82:0,24,613	0/1:6,0:6:16.71:17,0,170	1/1:17,0:14:31.71:176,32,0	1/1:3,0:3:8.18:37,8,0	1/1:5,1:6:12.20:58,12,0	0/1:5,0:4:8.97:9,0,11	0/1:8,0:8:31.23:31,0,198	0/0:12,0:12:36.01:0,36,511	0/0:7,0:7:8.74:0,9,202	0/0:14,0:13:35.71:0,36,501	0/1:8,0:8:16.76:17,0,106	0/0:25,0:22:53.60:0,54,812	0/0:25,0:25:62.32:0,62,925	0/0:9,0:9:24.06:0,24,358	1/1:6,0:6:7.48:56,7,0	1/1:12,1:13:1.13:72,1,0	1/1:4,0:4:8.39:44,8,0	1/1:9,1:8:9.61:72,10,0	0/0:29,0:29:86.06:0,86,1305	0/0:23,0:22:48.04:0,48,942	0/0:3,0:3:5.97:0,6,69
chr10	73294778	.	A	AC	277.11	PASS	AB=0.933;AC=7;AF=0.125;AN=56;BaseQRankSum=8.285;DP=492;FS=4.726;HRun=0;HaplotypeScore=110.9816;InbreedingCoeff=0.3845;MQ=56.74;MQ0=24;MQRankSum=-4.077;QD=1.36;ReadPosRankSum=-1.324;VQSLOD=2.1329;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:22.60:0,23,273	0/0:7,0:7:18.05:0,18,236	0/1:87,0:17:19.43:19,0,153	0/1:87,0:22:26.38:26,0,175	0/0:23,0:22:60.15:0,60,793	0/0:19,0:19:47.82:0,48,571	0/0:10,0:10:21.06:0,21,276	0/0:23,0:22:63:0,63,739	0/0:4,0:4:11.09:0,11,82	0/1:13,4:15:16.49:178,0,16	1/1:2,2:4:9.01:53,9,0	0/0:3,0:3:7.37:0,7,36	0/0:7,0:6:13.65:0,14,82	0/0:8,0:8:22.08:0,22,242	0/0:10,0:10:30.09:0,30,403	0/0:6,0:6:18.02:0,18,215	0/0:12,0:11:33.08:0,33,437	0/0:8,0:8:18.51:0,19,234	0/0:25,0:22:60.07:0,60,752	0/0:21,0:21:63.20:0,63,857	0/0:9,0:9:24.07:0,24,319	0/0:6,0:6:2.71:0,3,28	0/0:12,0:12:15.52:0,16,85	0/0:5,0:4:3.95:0,4,13	1/1:7,1:8:18.64:136,19,0	0/0:30,0:30:87.24:0,87,1148	0/0:23,0:22:63.11:0,63,788	0/0:3,0:3:6.02:0,6,77
chr10	73294786	.	A	AC	533.56	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=7.715;DP=443;FS=3.644;HRun=0;HaplotypeScore=101.5926;InbreedingCoeff=0.6879;MQ=64.59;MQ0=17;MQRankSum=-3.702;QD=5.62;ReadPosRankSum=1.159;VQSLOD=3.2438;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:11:28.11:0,28,331	0/0:6,0:6:18.06:0,18,245	0/0:70,0:18:6.41:0,6,294	0/1:67,0:21:23.86:24,0,178	0/0:23,0:22:66.21:0,66,897	0/0:22,0:21:53.84:0,54,667	0/0:10,0:10:24.06:0,24,305	0/0:18,0:17:48.15:0,48,657	0/0:6,0:6:15.18:0,15,165	1/1:8,8:15:25.28:311,25,0	1/1:3,1:4:11.99:107,12,0	0/0:5,0:5:11.55:0,12,60	0/0:6,0:5:6.77:0,7,38	0/0:9,0:9:24.48:0,24,275	0/0:10,0:10:27.09:0,27,371	0/0:6,0:6:18.06:0,18,252	0/0:13,0:12:36.12:0,36,490	0/0:8,0:8:15.52:0,16,210	0/0:21,0:20:57.08:0,57,713	0/0:21,0:21:63.17:0,63,858	0/0:10,0:10:27.09:0,27,375	0/0:5,0:5:6.43:0,6,30	0/0:8,0:8:15.85:0,16,83	0/0:3,0:2:0:0,0,0	1/1:2,6:8:12.28:232,12,0	0/0:32,0:32:96.21:0,96,1263	0/0:19,0:18:53.73:0,54,701	0/0:4,0:4:9.02:0,9,113
chr10	73294788	.	AC	A	923.82	PASS	AB=0.981;AC=20;AF=0.357;AN=56;BaseQRankSum=8.796;DP=434;FS=6.851;HRun=1;HaplotypeScore=94.3443;InbreedingCoeff=0.5754;MQ=68.16;MQ0=11;MQRankSum=-8.865;QD=4.67;ReadPosRankSum=-2.462;VQSLOD=-0.6117;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:14:27.76:28,0,243	0/0:6,0:6:5.08:0,5,185	0/1:61,3:18:11.07:11,0,270	0/1:56,2:21:28.65:29,0,106	0/0:24,0:23:55.95:0,56,788	0/0:24,0:23:38.98:0,39,613	0/0:10,0:10:18.11:0,18,257	0/0:18,0:17:48.14:0,48,611	0/0:6,0:6:1.03:0,1,139	1/1:12,4:15:35.93:422,36,0	1/1:3,2:5:14.25:142,14,0	1/1:5,0:5:8.22:44,8,0	1/1:4,0:3:4.25:29,4,0	0/0:9,0:9:9.32:0,9,223	0/0:11,0:11:22.01:0,22,334	0/0:6,0:6:18.06:0,18,232	0/0:14,0:13:29.88:0,30,413	0/0:8,0:8:14.81:0,15,165	0/0:19,0:19:44.15:0,44,518	0/0:21,0:21:63.04:0,63,748	0/0:9,0:9:24.05:0,24,303	1/1:3,2:5:7.35:52,7,0	1/1:8,0:8:17.79:107,18,0	1/1:3,0:2:2.97:20,3,0	1/1:7,1:8:23.82:226,24,0	0/0:31,0:31:76.04:0,76,1021	0/0:20,0:19:44.02:0,44,585	0/1:4,0:4:2.95:3,0,71
chr10	73294789	.	C	CA	597.94	PASS	AB=0.983;AC=17;AF=0.304;AN=56;BaseQRankSum=8.808;DP=427;FS=14.436;HRun=8;HaplotypeScore=99.9232;InbreedingCoeff=0.7218;MQ=70.02;MQ0=10;MQRankSum=-6.642;QD=3.44;ReadPosRankSum=-0.720;VQSLOD=-0.2749;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:31.66:0,32,267	0/0:6,0:6:15:0,15,137	0/1:62,0:19:5.36:5,0,207	0/1:52,1:21:65.53:66,0,72	0/0:24,0:23:62.88:0,63,559	0/0:24,0:23:53.87:0,54,470	0/0:10,0:10:18.01:0,18,165	0/0:17,0:17:45.02:0,45,409	0/0:6,0:6:12:0,12,110	1/1:15,1:15:33.20:230,33,0	1/1:6,1:7:17.91:148,18,0	1/1:4,0:4:2.49:6,2,0	1/1:4,0:3:6.78:31,7,0	0/0:9,0:9:17.73:0,18,164	0/0:11,0:11:27.01:0,27,247	0/0:6,0:6:17.96:0,18,156	0/0:14,0:13:35.81:0,36,297	0/0:8,0:8:12:0,12,110	0/0:16,0:16:32.91:0,33,290	0/0:21,0:21:60.01:0,60,542	0/0:10,0:10:21:0,21,192	1/1:5,0:5:8.60:53,9,0	1/1:8,0:8:12.20:67,12,0	0/1:3,0:2:0:0,0,0	1/1:5,3:8:20.87:172,21,0	0/0:32,0:32:72.01:0,72,656	0/0:20,0:19:41.96:0,42,376	0/0:4,0:4:6:0,6,55
chr10	73294796	.	AACC	A	1047.31	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=7.019;DP=413;FS=11.405;HRun=0;HaplotypeScore=100.3549;InbreedingCoeff=0.7116;MQ=72.56;MQ0=2;MQRankSum=-6.231;QD=24.94;ReadPosRankSum=2.186;VQSLOD=3.2536;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:34.83:0,35,520	0/0:7,0:7:18.06:0,18,404	0/0:40,0:16:42.05:0,42,827	0/0:44,0:22:8.65:0,9,431	0/0:24,0:24:69.24:0,69,1560	0/0:25,0:24:66.23:0,66,1447	0/0:11,0:11:21.07:0,21,476	0/0:20,0:20:57.20:0,57,1258	0/0:6,0:6:18.06:0,18,388	1/1:11,4:15:45.14:611,45,0	1/1:8,2:10:29.68:296,30,0	0/0:5,0:5:10.52:0,11,66	0/0:6,0:5:10.51:0,11,82	0/0:10,0:10:24.08:0,24,524	0/0:12,0:12:36.12:0,36,794	0/0:10,0:10:30.10:0,30,598	0/0:14,0:14:39.13:0,39,804	0/0:6,0:6:12.04:0,12,211	0/0:15,0:15:36.12:0,36,789	0/0:23,0:23:69.23:0,69,1520	0/0:11,0:11:33.11:0,33,688	0/1:6,0:6:6.10:6,0,14	0/0:8,0:8:3.88:0,4,58	0/0:6,0:5:2.97:0,3,20	1/1:10,1:11:26.10:278,26,0	0/0:28,0:28:78.74:0,79,1798	0/0:19,0:19:54.62:0,55,1129	0/0:4,0:4:6.02:0,6,142
chr10	73294797	.	ACC	A	901.55	PASS	AB=0.857;AC=7;AF=0.125;AN=56;BaseQRankSum=6.266;DP=404;FS=10.064;HRun=3;HaplotypeScore=90.4770;InbreedingCoeff=0.7592;MQ=75.56;MQ0=2;MQRankSum=-6.029;QD=21.99;ReadPosRankSum=2.111;VQSLOD=0.9443;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:36.06:0,36,597	0/0:6,0:6:18.06:0,18,326	0/0:37,0:17:44.74:0,45,723	0/0:44,0:22:42.39:0,42,477	0/0:24,0:24:66.21:0,66,1167	0/0:23,0:22:66.17:0,66,1137	0/0:11,0:11:21.07:0,21,383	0/0:21,0:21:60.19:0,60,1032	0/0:7,0:7:21.07:0,21,376	1/1:8,7:15:45.09:488,45,0	1/1:9,1:10:29.73:297,30,0	0/0:5,0:5:5.55:0,6,43	0/0:6,0:5:9.22:0,9,58	0/0:9,0:9:27.09:0,27,479	0/0:12,0:12:36.11:0,36,623	0/0:10,0:10:30.06:0,30,499	0/0:14,0:14:39.03:0,39,612	0/0:5,0:5:12.04:0,12,216	0/0:14,0:14:38.87:0,39,661	0/0:23,0:23:66.22:0,66,1187	0/0:11,0:11:30.08:0,30,540	0/1:5,0:6:1.89:2,0,14	0/0:9,0:9:7.89:0,8,65	0/0:6,0:5:0.89:0,1,2	1/1:7,3:10:26.84:255,27,0	0/0:27,0:27:78.25:0,78,1385	0/0:18,0:18:51.13:0,51,890	0/0:3,0:3:6.02:0,6,111
chr10	73294890	.	CAT	C	3993.27	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.389;DP=615;FS=19.395;HRun=0;HaplotypeScore=73.6406;InbreedingCoeff=0.9989;MQ=77.41;MQ0=0;MQRankSum=-1.549;QD=39.54;ReadPosRankSum=4.474;VQSLOD=3.9478;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.29:0,84,1563	0/0:12,0:12:36.11:0,36,651	0/0:21,0:21:60.20:0,60,1117	0/0:21,0:21:63.19:0,63,1152	0/0:23,0:23:69.24:0,69,1307	0/0:27,0:26:72.22:0,72,1313	0/0:22,0:22:66.21:0,66,1241	0/0:24,0:24:72.25:0,72,1372	0/0:15,0:15:45.12:0,45,788	0/0:34,0:34:96.32:0,96,1821	0/0:40,0:40:99:0,114,2073	1/1:0,20:20:51.17:780,51,0	1/1:0,17:16:45.15:689,45,0	0/0:16,0:16:48.16:0,48,909	0/0:20,0:20:60.21:0,60,1149	0/0:19,0:19:54.18:0,54,1012	0/0:17,0:17:51.15:0,51,926	0/0:12,0:12:33.11:0,33,637	0/0:28,0:28:78.26:0,78,1463	0/0:27,0:27:75.26:0,75,1405	0/0:32,0:32:96.33:0,96,1842	1/1:0,17:17:42.14:643,42,0	1/1:0,24:24:66.22:1010,66,0	1/1:0,23:23:57.19:872,57,0	0/0:23,0:23:69.21:0,69,1256	0/0:21,0:21:63.20:0,63,1183	0/0:24,0:24:72.21:0,72,1305	0/0:7,0:7:21.05:0,21,371
chr10	73295282	.	GA	G	1009.21	PASS	AB=0.865;AC=10;AF=0.179;AN=56;BaseQRankSum=1.625;DP=611;FS=3.250;HRun=14;HaplotypeScore=85.5118;InbreedingCoeff=0.4458;MQ=69.38;MQ0=2;MQRankSum=2.674;QD=5.94;ReadPosRankSum=2.168;VQSLOD=2.9554;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:21,15:36:9.15:366,0,9	0/0:8,0:10:26.71:0,27,224	0/0:34,0:20:20.75:0,21,143	0/0:15,0:9:15.71:0,16,108	0/0:34,1:36:36.43:0,36,476	0/1:19,2:21:6.31:6,0,221	0/0:13,1:14:18.44:0,18,308	0/0:34,2:37:6.69:0,7,422	0/0:20,0:20:50.67:0,51,440	1/1:10,13:24:42.47:281,42,0	1/1:7,14:22:43.73:293,44,0	0/0:5,1:21:5.28:0,5,108	0/0:6,1:27:16.17:0,16,162	0/0:13,1:14:10:0,10,210	0/0:18,1:20:20.03:0,20,337	0/0:24,0:24:56.32:0,56,493	0/0:13,1:15:8.10:0,8,194	0/0:19,2:21:9.72:0,10,177	0/0:24,0:25:59.07:0,59,552	0/0:26,1:27:22.29:0,22,498	0/0:16,0:16:32.87:0,33,290	0/0:8,0:18:32.08:0,32,184	0/1:9,1:22:0.72:1,0,70	0/0:6,0:8:13.86:0,14,67	1/1:4,16:22:4.73:199,5,0	0/1:20,3:23:7.69:8,0,339	0/0:26,0:27:42.56:0,43,449	0/0:8,1:8:0.18:0,0,130
chr10	73296402	.	TAAAA	T	1322.97	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=0.402;DP=434;FS=12.522;HRun=15;HaplotypeScore=89.4994;InbreedingCoeff=0.9035;MQ=58.35;MQ0=5;MQRankSum=0.049;QD=22.42;ReadPosRankSum=3.697;VQSLOD=1.3871;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:18:43.01:0,43,764	0/0:3,0:3:6.02:0,6,138	0/0:17,0:6:12.37:0,12,129	0/0:11,0:5:6:0,6,75	0/0:19,0:23:63.15:0,63,1186	0/0:18,0:19:42.14:0,42,904	0/0:14,0:15:36.12:0,36,660	0/0:23,0:23:56.61:0,57,1083	0/0:10,0:11:24.08:0,24,528	0/0:7,0:19:41.03:0,41,290	0/0:3,0:14:26.47:0,26,179	1/1:1,16:17:42.11:562,42,0	1/1:0,9:10:21.05:269,21,0	0/0:14,0:15:30.10:0,30,605	0/0:17,0:18:51.17:0,51,1044	0/0:9,0:9:21.07:0,21,441	0/0:21,0:22:55.03:0,55,1089	0/0:4,0:13:27.09:0,27,510	0/0:24,0:22:50.96:0,51,1036	0/0:17,0:19:51.17:0,51,937	0/0:4,0:4:9.03:0,9,191	1/1:2,9:11:27.08:368,27,0	1/1:3,7:11:18.03:228,18,0	1/1:5,5:9:5.98:64,6,0	0/0:5,0:12:24.57:0,25,177	0/0:19,0:19:48.16:0,48,893	0/0:30,0:33:96.31:0,96,2000	0/0:11,0:12:33.11:0,33,640
chr10	73297508	.	C	CT	2315.67	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.334;DP=636;FS=0.459;HRun=8;HaplotypeScore=64.4016;InbreedingCoeff=0.9699;MQ=68.22;MQ0=2;MQRankSum=0.153;QD=28.95;ReadPosRankSum=1.642;VQSLOD=3.8647;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.02:0,87,789	0/0:8,0:8:24.01:0,24,220	0/0:23,0:19:47.80:0,48,418	0/0:19,0:17:7.72:0,8,222	0/0:39,0:39:99:0,104,929	0/0:26,0:26:69.03:0,69,632	0/0:14,0:14:42.02:0,42,384	0/0:31,0:31:66.01:0,66,601	0/0:28,0:28:84.01:0,84,758	1/1:5,32:37:96.29:1108,96,0	1/1:2,21:23:60.18:692,60,0	0/0:14,0:14:36.01:0,36,330	0/0:20,0:20:48.02:0,48,439	0/0:18,0:18:48.02:0,48,438	0/0:18,0:19:56.07:0,56,500	0/0:22,0:22:63.03:0,63,576	0/0:17,0:17:47.97:0,48,426	0/0:13,0:13:30.01:0,30,274	0/0:19,0:19:45.02:0,45,412	0/0:25,0:25:72.01:0,72,649	0/0:23,0:23:54.01:0,54,494	0/0:22,0:22:60.03:0,60,549	0/0:28,0:28:75.03:0,75,686	0/0:26,0:26:71.07:0,71,638	1/1:1,19:20:57.17:658,57,0	0/0:37,1:38:76.44:0,76,954	0/0:24,0:24:66.03:0,66,604	0/0:6,0:6:18.01:0,18,165
chr10	73298186	.	AC	A	1569.10	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=8.518;DP=437;FS=15.782;HRun=1;HaplotypeScore=71.2055;InbreedingCoeff=0.8937;MQ=60.19;MQ0=7;MQRankSum=-5.033;QD=28.02;ReadPosRankSum=-0.922;VQSLOD=2.0282;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:52.26:0,52,868	0/0:4,0:4:12.04:0,12,173	0/0:30,0:15:41.65:0,42,476	0/0:32,0:8:3.66:0,4,74	0/0:15,0:15:45.15:0,45,654	0/0:16,0:16:48.14:0,48,682	0/0:6,0:6:18.06:0,18,261	0/0:34,0:34:93.56:0,94,1215	0/0:14,0:14:29.12:0,29,493	1/1:4,7:13:33.82:348,34,0	1/1:3,6:11:30.04:346,30,0	1/1:4,5:9:24.06:291,24,0	1/1:1,7:8:21.03:262,21,0	0/0:10,0:10:17.54:0,18,302	0/0:24,0:24:69.09:0,69,890	0/0:14,0:14:39.11:0,39,546	0/0:27,0:27:81.23:0,81,1127	0/0:7,0:7:19.21:0,19,167	0/0:17,0:16:45.11:0,45,608	0/0:26,0:26:77.91:0,78,1035	0/0:11,0:11:33.11:0,33,480	1/1:0,1:1:3.01:42,3,0	1/1:4,9:13:33.97:425,34,0	./.	1/1:1,0:1:3.01:39,3,0	0/0:22,1:22:27.30:0,27,772	0/0:21,0:21:63.14:0,63,857	0/0:21,0:21:63.19:0,63,899
chr10	73298191	.	AC	A	688.83	PASS	AB=0.958;AC=13;AF=0.241;AN=54;BaseQRankSum=10.307;DP=451;FS=3.327;HRun=1;HaplotypeScore=73.5109;InbreedingCoeff=0.5642;MQ=59.01;MQ0=8;MQRankSum=-7.960;QD=7.33;ReadPosRankSum=-2.015;VQSLOD=0.0482;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:30.31:0,30,741	0/0:3,0:3:9.03:0,9,132	0/0:31,0:14:39.94:0,40,427	0/1:35,0:8:9.22:9,0,63	0/0:18,0:18:54.05:0,54,713	0/0:17,0:17:51.14:0,51,705	0/0:5,0:5:15.05:0,15,219	0/0:29,0:29:78.66:0,79,1119	0/0:16,0:16:38.40:0,38,520	1/1:11,2:13:33.71:331,34,0	1/1:9,0:9:24.07:289,24,0	1/1:9,1:10:1.95:72,2,0	1/1:9,0:9:5.62:45,6,0	0/0:10,0:10:12.66:0,13,302	0/0:25,0:25:72.24:0,72,1033	0/0:15,0:15:42.12:0,42,571	0/0:28,0:28:81.13:0,81,1130	0/0:5,1:6:5.27:0,5,55	0/0:21,0:20:49.93:0,50,631	0/0:25,0:25:75.23:0,75,1069	0/0:11,0:11:33.08:0,33,458	0/1:3,0:3:10.28:18,0,10	0/1:12,2:14:46.31:46,0,47	./.	1/1:1,0:1:3.01:39,3,0	0/0:23,0:22:17.35:0,17,750	0/0:20,0:20:60.18:0,60,830	0/0:22,0:22:66.20:0,66,932
chr10	73298205	.	AAC	A	1310.35	PASS	AB=1.000;AC=16;AF=0.308;AN=52;BaseQRankSum=12.627;DP=492;FS=0.982;HRun=0;HaplotypeScore=87.7948;InbreedingCoeff=0.8075;MQ=58.36;MQ0=7;MQRankSum=-9.979;QD=9.93;ReadPosRankSum=-3.840;VQSLOD=2.7690;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:27:34.72:35,0,215	0/0:5,0:5:15.02:0,15,195	0/1:33,0:13:13.33:13,0,170	0/0:37,0:10:12.56:0,13,84	0/0:23,0:23:63.09:0,63,899	0/0:20,0:20:57.01:0,57,813	0/0:7,0:7:21.05:0,21,291	0/0:31,0:31:73.79:0,74,1081	0/0:20,0:20:56.39:0,56,836	1/1:13,1:14:34.79:241,35,0	1/1:11,3:14:29.82:273,30,0	1/1:9,0:9:20.92:184,21,0	1/1:12,0:12:31.68:262,32,0	0/0:15,0:14:37.56:0,38,480	0/0:26,0:26:72.19:0,72,1111	0/0:16,0:16:45.02:0,45,648	0/0:29,0:29:81.08:0,81,1171	1/1:2,3:5:14.94:144,15,0	0/0:24,0:23:64.22:0,64,823	0/0:22,0:22:63.12:0,63,971	0/0:10,0:10:27.09:0,27,438	1/1:5,0:5:13.89:92,14,0	1/1:12,0:12:30.93:261,31,0	./.	./.	0/0:28,0:27:53.20:0,53,1070	0/0:20,0:20:59.51:0,60,853	0/0:23,0:23:68.81:0,69,1009
chr10	73298206	.	AC	A	1361.42	PASS	AB=0.954;AC=17;AF=0.327;AN=52;BaseQRankSum=12.659;DP=491;FS=3.490;HRun=1;HaplotypeScore=79.3920;InbreedingCoeff=0.7601;MQ=58.47;MQ0=7;MQRankSum=-9.885;QD=8.20;ReadPosRankSum=-3.563;VQSLOD=-0.2901;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:27:11.48:11,0,120	0/0:5,0:5:15.02:0,15,162	0/1:29,3:13:12.54:13,0,153	0/1:35,2:10:3.76:4,0,55	0/0:23,0:23:62.84:0,63,682	0/0:19,0:19:57.03:0,57,651	0/0:7,0:7:21.03:0,21,232	0/0:32,0:32:79.90:0,80,908	0/0:20,0:20:56.36:0,56,650	1/1:14,0:14:35.85:214,36,0	1/1:12,0:12:29.52:198,30,0	1/1:6,3:9:21.38:229,21,0	1/1:6,6:12:31.22:307,31,0	0/0:16,0:15:37.46:0,37,375	0/0:25,0:25:72.08:0,72,860	0/0:16,0:16:45.02:0,45,514	0/0:29,0:29:80.65:0,81,906	1/1:5,0:5:15:142,15,0	0/0:24,0:23:64.13:0,64,671	0/0:23,0:23:63.02:0,63,751	0/0:10,0:10:27.09:0,27,340	1/1:4,1:5:13.79:115,14,0	1/1:5,7:12:33:320,33,0	./.	./.	0/0:28,0:27:48.52:0,49,809	0/0:20,0:20:44.14:0,44,651	0/0:23,0:23:62.98:0,63,775
chr10	73298208	.	AAAAACAACAAC	A	1405.59	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=10.418;DP=494;FS=10.764;HRun=0;HaplotypeScore=168.8220;InbreedingCoeff=0.6137;MQ=58.58;MQ0=7;MQRankSum=-8.534;QD=19.52;ReadPosRankSum=-3.817;VQSLOD=1.3103;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:23.35:0,23,1308	0/0:5,0:5:15.04:0,15,490	0/0:31,0:13:25.41:0,25,581	0/0:37,0:11:14.74:0,15,230	0/0:23,0:23:60.18:0,60,2715	0/0:19,0:19:51.12:0,51,2037	0/0:7,0:7:18.05:0,18,655	0/0:32,0:32:67.54:0,68,2475	0/0:20,0:20:54.16:0,54,2495	1/1:15,2:17:36.23:581,36,0	1/1:9,2:11:24.42:347,24,0	0/1:9,0:9:62.99:63,0,100	0/1:12,0:12:35.64:123,0,36	0/0:16,0:15:39.12:0,39,1483	0/0:27,0:27:75.25:0,75,3403	0/0:16,0:16:45.15:0,45,1935	0/0:28,0:28:81.28:0,81,3609	1/1:6,0:6:17.14:158,17,0	0/0:22,0:21:54.17:0,54,1817	0/0:22,0:22:57.15:0,57,2360	0/0:10,0:10:27.09:0,27,1061	0/1:5,0:5:39.35:72,0,39	1/1:12,0:12:15.78:230,16,0	0/0:3,0:3:2.99:0,3,23	./.	0/0:28,0:27:75.15:0,75,3164	0/0:21,0:21:51.09:0,51,1965	0/0:23,0:23:63.19:0,63,3285
chr10	73298210	.	AAACAAC	A	1714	PASS	AB=1.000;AC=15;AF=0.288;AN=52;BaseQRankSum=11.817;DP=486;FS=2.249;HRun=0;HaplotypeScore=121.4516;InbreedingCoeff=0.9062;MQ=59.03;MQ0=7;MQRankSum=-9.354;QD=17.31;ReadPosRankSum=-4.032;VQSLOD=1.8058;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:26:1.09:1,0,453	0/0:5,0:5:12.04:0,12,300	0/0:30,0:13:14.11:0,14,267	0/0:35,0:11:6.04:0,6,140	0/0:23,0:23:57.19:0,57,1658	0/0:18,0:18:51.05:0,51,1272	0/0:7,0:7:18.05:0,18,406	0/0:34,0:34:73.32:0,73,1608	0/0:20,0:20:54.10:0,54,1547	1/1:14,0:14:13.75:291,14,0	1/1:11,0:11:18.40:156,18,0	1/1:9,1:10:27.06:330,27,0	1/1:11,3:14:35.19:412,35,0	0/0:16,0:15:30.07:0,30,898	0/0:27,0:27:75.17:0,75,2040	0/0:16,0:16:48.11:0,48,1176	0/0:28,0:28:77.30:0,77,2181	1/1:6,0:6:16.04:155,16,0	0/0:21,0:20:57.17:0,57,1196	0/0:22,0:22:54.15:0,54,1447	0/0:10,0:10:27.07:0,27,649	1/1:4,1:5:14.59:147,15,0	1/1:10,2:12:33.06:409,33,0	./.	./.	0/0:26,0:25:75.23:0,75,2055	0/0:18,0:18:42.12:0,42,1181	0/0:24,0:24:66.17:0,66,2046
chr10	73298212	.	ACAACAAC	A	2149.15	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=11.606;DP=476;FS=1.543;HRun=0;HaplotypeScore=126.7134;InbreedingCoeff=0.8339;MQ=59.51;MQ0=6;MQRankSum=-9.750;QD=21.93;ReadPosRankSum=-3.466;VQSLOD=2.4955;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:25:10.03:10,0,736	0/0:6,0:6:18.05:0,18,447	0/0:28,0:12:5.45:0,5,404	0/0:33,0:11:4.53:0,5,193	0/0:22,0:22:60.19:0,60,2016	0/0:19,0:19:57.15:0,57,1666	0/0:6,0:6:18.06:0,18,532	0/0:38,0:38:72.66:0,73,2571	0/0:18,0:18:54.19:0,54,1868	1/1:14,0:14:16.69:405,17,0	1/1:11,0:11:21.64:253,22,0	1/1:8,2:10:29.11:327,29,0	1/1:13,1:14:24.44:422,24,0	0/0:16,0:15:39.06:0,39,1130	0/0:26,0:26:75.26:0,75,2476	0/0:16,0:16:48.16:0,48,1505	0/0:28,0:28:81.14:0,81,2623	1/1:6,0:6:18.04:273,18,0	0/0:19,0:19:57.17:0,57,1523	0/0:19,0:19:57.18:0,57,1809	0/0:11,0:11:25.63:0,26,813	1/1:4,1:5:13.52:148,14,0	1/1:8,2:12:33.11:504,33,0	0/0:3,0:3:2.90:0,3,16	./.	0/0:26,0:25:75.26:0,75,2422	0/0:18,0:18:54.13:0,54,1560	0/0:22,0:22:66.23:0,66,2385
chr10	73298214	.	AACAAC	A	1543.68	PASS	AB=1.000;AC=14;AF=0.259;AN=54;BaseQRankSum=11.799;DP=476;FS=0.000;HRun=0;HaplotypeScore=112.6271;InbreedingCoeff=0.7934;MQ=59.65;MQ0=5;MQRankSum=-8.921;QD=15.59;ReadPosRankSum=-3.477;VQSLOD=2.2428;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:25:83.06:83,0,311	0/0:5,0:5:14.97:0,15,315	0/0:26,0:12:18.58:0,19,305	0/0:31,0:11:14.83:0,15,206	0/0:22,0:22:57.19:0,57,1601	0/0:18,0:18:54.13:0,54,1285	0/0:6,0:6:18.05:0,18,405	0/0:39,0:39:92.98:0,93,2029	0/0:18,0:18:54.18:0,54,1481	1/1:11,3:14:17.80:423,18,0	1/1:7,4:11:18.52:273,19,0	1/1:10,0:10:24.89:189,25,0	1/1:15,0:15:16.66:243,17,0	0/0:16,0:15:39:0,39,924	0/0:26,0:26:75.24:0,75,1921	0/0:16,0:16:48.16:0,48,1173	0/0:29,0:29:84.20:0,84,2086	1/1:6,0:6:6.90:105,7,0	0/0:19,0:19:51.96:0,52,1204	0/0:18,0:18:54.17:0,54,1397	0/0:12,0:12:28.62:0,29,630	0/1:5,0:5:0.96:82,0,1	1/1:12,0:12:32.71:329,33,0	0/0:5,0:5:3.01:0,3,24	./.	0/0:26,0:25:74.84:0,75,1897	0/0:18,0:18:48.16:0,48,1210	0/0:22,0:22:66.23:0,66,1860
chr10	73298215	.	AC	A	789.57	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=11.518;DP=474;FS=0.000;HRun=1;HaplotypeScore=81.4356;InbreedingCoeff=0.7909;MQ=58.55;MQ0=5;MQRankSum=-8.194;QD=10.25;ReadPosRankSum=-2.313;VQSLOD=0.6093;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:29.44:0,29,241	0/0:5,0:5:15.05:0,15,240	0/0:25,1:12:29.07:0,29,307	0/0:32,0:11:0.44:0,0,148	0/0:21,0:21:57.19:0,57,906	0/0:18,0:18:54.13:0,54,832	0/0:6,0:6:18.05:0,18,259	0/0:41,0:41:99:0,107,1578	0/0:18,0:18:54.18:0,54,846	0/1:14,0:14:6.52:110,0,7	1/1:10,0:11:16.68:73,17,0	1/1:9,0:9:26.69:209,27,0	1/1:15,0:15:34.82:242,35,0	0/0:16,0:15:39.12:0,39,580	0/0:26,0:26:75.23:0,75,1154	0/0:16,0:16:48.16:0,48,764	0/0:29,0:29:84.12:0,84,1243	1/1:3,3:6:0.69:50,1,0	0/0:19,0:19:57.19:0,57,870	0/0:18,0:18:54.18:0,54,853	0/0:12,0:12:30.09:0,30,443	1/1:5,0:5:13.22:79,13,0	1/1:11,1:12:31.40:197,31,0	1/1:5,0:5:1.57:5,2,0	./.	0/0:26,0:25:75.22:0,75,1155	0/0:16,0:16:48.16:0,48,758	0/0:22,0:22:64.10:0,64,1007
chr10	73298217	.	AAC	A	564.39	PASS	AB=1.000;AC=12;AF=0.222;AN=54;BaseQRankSum=10.270;DP=465;FS=2.642;HRun=0;HaplotypeScore=87.2244;InbreedingCoeff=0.6250;MQ=59.46;MQ0=5;MQRankSum=-7.557;QD=6.07;ReadPosRankSum=-2.568;VQSLOD=2.7655;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:0.08:0,0,377	0/0:5,0:5:15.05:0,15,223	0/0:24,0:13:14.54:0,15,210	0/0:30,0:11:9.03:0,9,126	0/0:22,0:22:60.17:0,60,914	0/0:17,0:17:51.11:0,51,703	0/0:5,0:5:14.92:0,15,203	0/0:41,0:41:99:0,110,1389	0/0:18,0:18:54.05:0,54,844	1/1:12,1:13:26.24:234,26,0	1/1:8,0:8:16.87:165,17,0	0/1:9,0:9:0.98:41,0,1	0/1:14,0:14:56.68:59,0,57	0/0:16,0:15:39.07:0,39,546	0/0:26,0:26:75.19:0,75,1115	0/0:16,0:16:48.01:0,48,690	0/0:28,0:28:77.97:0,78,1127	1/1:3,3:6:6.29:77,6,0	0/0:21,0:21:55.57:0,56,679	0/0:18,0:18:51.13:0,51,768	0/0:11,0:11:22.64:0,23,316	0/1:5,0:5:11.70:17,0,12	1/1:12,0:12:25.31:133,25,0	0/0:3,2:5:8.97:0,9,68	./.	0/0:27,0:26:78.18:0,78,1097	0/0:16,0:16:48.11:0,48,712	0/0:22,0:22:64.46:0,64,1041
chr10	73298219	.	C	CA	358.93	PASS	AB=0.882;AC=9;AF=0.167;AN=54;BaseQRankSum=2.835;DP=487;FS=1.404;HRun=11;HaplotypeScore=84.9657;InbreedingCoeff=0.2313;MQ=60.55;MQ0=5;MQRankSum=-4.108;QD=2.92;ReadPosRankSum=-3.071;VQSLOD=-0.5832;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:29:35.56:199,36,0	0/1:4,1:5:15.49:15,0,78	0/0:24,0:13:3.48:0,3,71	0/0:31,0:12:14.51:0,15,93	0/0:23,0:23:47.74:0,48,368	0/1:16,2:18:19.09:19,0,232	0/0:5,0:6:10.98:0,11,76	0/0:39,1:40:50.91:0,51,550	0/0:19,0:20:49.81:0,50,375	0/1:11,1:12:17.04:141,0,17	1/1:8,0:8:4.56:54,5,0	0/0:10,0:10:23.29:0,23,158	0/0:16,0:16:28.58:0,29,204	0/0:15,0:14:35.84:0,36,274	0/0:30,3:33:35.20:0,35,455	0/0:17,0:17:35.83:0,36,278	0/0:26,0:27:64.76:0,65,493	0/0:6,0:6:8.26:0,8,31	0/1:18,3:21:42.43:42,0,231	0/0:18,0:18:41.81:0,42,325	0/0:12,0:12:20.08:0,20,158	0/0:5,0:5:8.96:0,9,68	0/0:11,0:11:11.38:0,11,67	0/0:5,0:5:8.97:0,9,69	./.	0/1:25,4:29:30.14:30,0,347	0/0:18,0:18:44.79:0,45,346	0/0:22,0:22:62.76:0,63,487
chr10	73298687	.	G	GA	840.31	PASS	AB=0.972;AC=8;AF=0.143;AN=56;BaseQRankSum=-1.905;DP=427;FS=5.798;HRun=9;HaplotypeScore=50.2679;InbreedingCoeff=0.6437;MQ=59.44;MQ0=21;MQRankSum=0.323;QD=11.36;ReadPosRankSum=1.023;VQSLOD=2.2601;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:38.99:0,39,338	0/0:5,0:5:11.94:0,12,97	0/0:30,0:7:13.26:0,13,82	0/0:27,0:10:10.68:0,11,78	0/0:22,0:21:47.94:0,48,409	0/0:15,0:15:41.95:0,42,356	0/0:12,0:10:14.89:0,15,130	0/0:32,0:30:83.96:0,84,726	0/0:3,0:2:5.98:0,6,48	1/1:2,11:13:26.62:285,27,0	1/1:2,18:20:45.12:489,45,0	0/1:12,0:11:2.94:9,0,3	0/0:14,0:14:10.90:0,11,28	0/0:3,0:2:3:0,3,26	0/0:11,0:10:23.99:0,24,208	0/0:6,0:6:18:0,18,156	0/0:42,0:41:80.74:0,81,740	0/1:16,1:16:2.70:3,0,226	0/0:22,0:18:47.98:0,48,413	0/0:18,0:18:44.97:0,45,390	0/0:9,0:7:21:0,21,182	0/0:8,0:7:3.62:0,4,9	0/0:12,0:11:6.99:0,7,19	0/0:9,0:9:3.62:0,4,10	1/1:1,11:12:18.05:199,18,0	0/0:14,0:14:29.96:0,30,254	0/0:12,0:11:32.88:0,33,267	0/0:9,0:11:19.08:0,19,224
chr10	73298688	.	AAAAAAAAATT	A	1415.65	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.631;DP=427;FS=9.383;HRun=0;HaplotypeScore=109.6967;InbreedingCoeff=0.8718;MQ=60.70;MQ0=20;MQRankSum=-6.254;QD=26.22;ReadPosRankSum=2.000;VQSLOD=1.9863;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:39.13:0,39,1792	0/0:5,0:5:15:0,15,501	0/0:31,0:8:20.60:0,21,370	0/0:27,0:10:20.87:0,21,485	0/0:22,0:21:54.13:0,54,2099	0/0:15,0:15:45.10:0,45,1892	0/0:11,0:10:21.07:0,21,819	0/0:32,0:30:87.30:0,87,3873	0/0:3,0:2:5.99:0,6,94	0/0:15,0:15:33.11:0,33,1205	0/0:20,0:20:16.77:0,17,1729	1/1:5,7:11:12:237,12,0	1/1:0,14:14:18.05:544,18,0	0/0:3,0:2:3.01:0,3,149	0/0:10,0:9:24.08:0,24,1016	0/0:6,0:6:18.06:0,18,888	0/0:43,0:42:99:0,108,4653	0/0:17,0:16:33.75:0,34,1535	0/0:22,0:18:48.13:0,48,2100	0/0:18,0:18:45.14:0,45,2234	0/0:9,0:7:21.07:0,21,1046	1/1:4,4:7:9.03:216,9,0	1/1:5,6:10:15.05:398,15,0	1/1:1,8:9:6.02:181,6,0	0/0:11,0:11:18.06:0,18,744	0/0:14,0:14:30.04:0,30,1091	0/0:12,0:11:33.03:0,33,1256	0/0:11,0:11:30.10:0,30,1428
chr10	73299241	.	GA	G	2908.55	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.530;DP=629;FS=3.875;HRun=4;HaplotypeScore=59.8394;InbreedingCoeff=0.9923;MQ=79.99;MQ0=0;MQRankSum=-1.550;QD=28.80;ReadPosRankSum=2.765;VQSLOD=3.6926;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1674	0/0:8,0:8:24.08:0,24,336	0/0:15,0:15:45.10:0,45,608	0/0:19,0:19:45.07:0,45,571	0/0:32,0:32:96.31:0,96,1327	0/0:16,0:16:45.15:0,45,630	0/0:15,0:15:45.15:0,45,630	0/0:40,0:40:99:0,117,1611	0/0:25,0:25:72.24:0,72,1008	0/0:38,0:38:99:0,111,1538	0/0:20,0:20:57.17:0,57,765	1/1:0,22:22:54.17:647,54,0	1/1:1,16:17:39.12:468,39,0	0/0:23,0:23:66.22:0,66,924	0/0:21,0:21:60.20:0,60,839	0/0:25,0:25:69.21:0,69,948	0/0:26,0:26:78.25:0,78,1075	0/0:12,0:12:36.12:0,36,504	0/0:24,0:24:69.18:0,69,902	0/0:23,0:23:69.23:0,69,966	0/0:27,0:27:81.20:0,81,1058	1/1:1,26:27:78.23:926,78,0	1/1:0,22:22:50.66:611,51,0	1/1:0,13:13:36.11:432,36,0	0/0:17,0:17:51.16:0,51,699	0/0:23,0:23:69.23:0,69,962	0/0:34,0:33:99:0,102,1428	0/0:4,0:4:12.03:0,12,151
chr10	73299607	.	TA	T	3491.20	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.472;DP=556;FS=0.352;HRun=11;HaplotypeScore=54.2750;InbreedingCoeff=0.9154;MQ=65.17;MQ0=0;MQRankSum=-0.411;QD=20.18;ReadPosRankSum=2.701;VQSLOD=4.5702;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:28:50.40:0,50,705	0/0:8,0:8:24.06:0,24,256	0/0:6,0:6:11.97:0,12,106	0/0:3,0:4:1.27:0,1,46	0/0:30,1:31:53.54:0,54,768	0/0:26,0:27:72.01:0,72,750	0/0:11,1:12:2.43:0,2,231	0/0:38,1:41:71.23:0,71,907	0/0:18,0:18:48.09:0,48,495	1/1:1,18:19:50.93:419,51,0	1/1:2,24:26:65.90:542,66,0	1/1:1,17:18:50.94:419,51,0	1/1:2,21:23:62.92:517,63,0	0/0:16,0:16:42.09:0,42,440	0/0:24,1:24:41.52:0,42,647	0/0:16,0:16:45.11:0,45,480	0/0:18,1:19:17.49:0,17,371	1/1:1,15:16:32.96:271,33,0	0/0:20,1:21:23.56:0,24,443	0/0:29,1:30:53.53:0,54,761	0/0:5,0:5:12.03:0,12,128	1/1:2,17:19:20.95:342,21,0	1/1:4,25:29:66.81:563,67,0	1/1:0,3:3:8.99:74,9,0	1/1:4,16:20:41.93:345,42,0	0/0:20,1:21:32.47:0,32,536	0/0:27,1:28:50.55:0,51,743	0/0:25,2:27:31.89:0,32,728
chr10	73301045	.	TA	T	805.39	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.755;DP=381;FS=4.012;HRun=10;HaplotypeScore=48.1291;InbreedingCoeff=0.8979;MQ=73.92;MQ0=0;MQRankSum=1.187;QD=18.73;ReadPosRankSum=0.688;VQSLOD=4.2200;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:61.66:0,62,645	0/0:7,0:7:18.05:0,18,199	0/0:7,0:7:7.94:0,8,82	0/0:13,0:12:5.61:0,6,190	0/0:21,0:22:56.99:0,57,610	0/0:12,0:12:30.08:0,30,332	0/0:14,0:14:39.11:0,39,431	0/0:24,0:24:60.15:0,60,656	0/0:11,0:11:30.08:0,30,332	1/1:0,12:12:35.99:313,36,0	1/1:4,6:9:17.99:156,18,0	0/0:9,0:9:24.06:0,24,265	0/0:10,0:10:27.03:0,27,285	0/0:11,0:11:30.08:0,30,332	0/0:20,1:21:37.12:0,37,638	0/0:9,0:9:20.81:0,21,199	0/0:30,0:30:77.99:0,78,833	1/1:1,11:12:29.98:260,30,0	0/0:19,0:19:48.08:0,48,502	0/0:19,0:19:48.13:0,48,531	0/0:10,0:10:27.07:0,27,298	0/0:5,0:5:12.03:0,12,132	0/0:3,0:3:9.02:0,9,100	0/0:10,0:10:27.07:0,27,298	1/1:0,9:9:26.99:234,27,0	0/0:21,1:22:54.14:0,54,591	0/0:11,1:13:6.85:0,7,276	0/0:13,0:13:36.10:0,36,398
chr10	73301276	.	A	AC	114.01	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=1.941;DP=328;FS=7.551;HRun=0;HaplotypeScore=48.5315;InbreedingCoeff=0.4384;MQ=80.28;MQ0=3;MQRankSum=-1.666;QD=3.56;ReadPosRankSum=1.395;VQSLOD=1.8254;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:13:1.72:2,0,53	0/0:7,0:7:18.45:0,18,194	0/0:30,0:16:19.82:0,20,242	0/0:19,0:12:12.48:0,12,152	0/0:19,0:18:44.86:0,45,497	0/0:16,0:15:39.50:0,40,435	0/0:6,0:6:7.71:0,8,153	0/0:25,0:23:57.98:0,58,640	0/0:6,0:6:18.06:0,18,248	0/0:13,0:13:36.01:0,36,343	0/0:9,0:8:20.97:0,21,188	0/0:7,0:7:10.77:0,11,58	0/1:6,0:6:3.95:4,0,13	0/0:10,0:10:24.88:0,25,285	0/0:4,0:4:9.90:0,10,106	0/0:4,0:4:9.03:0,9,118	0/0:33,0:30:54.56:0,55,649	1/1:4,8:12:13.83:200,14,0	0/0:18,0:17:45.92:0,46,516	0/0:9,0:9:13.36:0,13,128	0/0:1,0:1:0.47:0,0,1	0/0:3,0:3:1.77:0,2,3	0/0:2,0:2:3.47:0,3,26	0/0:2,0:2:6:0,6,52	0/0:11,0:11:26.93:0,27,247	0/0:13,0:13:36.06:0,36,349	0/0:18,0:18:47.88:0,48,447	0/0:11,0:9:21:0,21,246
chr10	73302351	.	T	TA	3815.76	PASS	AB=0.720;AC=16;AF=0.286;AN=56;BaseQRankSum=-9.278;DP=585;FS=0.374;HRun=9;HaplotypeScore=60.3713;InbreedingCoeff=0.8274;MQ=74.84;MQ0=0;MQRankSum=-0.115;QD=18.61;ReadPosRankSum=0.365;VQSLOD=3.8020;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:68.98:0,69,599	0/0:16,0:16:41.97:0,42,361	0/0:17,0:15:15.06:0,15,128	0/0:18,0:13:21.47:0,21,192	0/0:29,0:30:58.61:0,59,656	0/0:30,0:30:71.67:0,72,609	0/0:9,0:9:23.96:0,24,200	0/0:25,0:26:52.96:0,53,435	0/0:24,0:24:59.44:0,59,498	1/1:7,20:27:56.21:658,56,0	1/1:8,23:31:69.02:719,69,0	1/1:5,10:15:27.07:298,27,0	1/1:2,13:15:27.07:297,27,0	0/0:16,0:16:41.96:0,42,358	0/0:27,0:27:74.97:0,75,647	0/0:15,0:15:41.97:0,42,360	0/0:20,0:20:50.98:0,51,443	0/0:14,0:13:41.96:0,42,358	0/0:14,0:14:32.95:0,33,281	0/0:26,0:26:29.56:0,30,413	0/0:13,0:13:35.99:0,36,312	1/1:7,21:28:10.94:549,11,0	1/1:1,14:15:39.11:431,39,0	0/1:2,13:15:9.98:356,0,10	1/1:4,17:21:45.12:498,45,0	0/1:34,4:38:10.10:10,0,699	0/0:31,0:32:76.94:0,77,641	0/0:5,0:5:15:0,15,130
chr10	73303057	.	TA	T	3479.19	PASS	AB=0.836;AC=19;AF=0.339;AN=56;BaseQRankSum=10.929;DP=485;FS=0.000;HRun=10;HaplotypeScore=52.4878;InbreedingCoeff=0.7271;MQ=73.52;MQ0=0;MQRankSum=-0.102;QD=17.22;ReadPosRankSum=1.968;VQSLOD=3.9909;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:18.52:0,19,199	0/0:8,1:9:1.02:0,1,239	0/0:12,0:12:28.71:0,29,298	0/0:17,0:17:23.97:0,24,247	0/0:20,0:21:56.98:0,57,604	0/0:30,0:30:78.20:0,78,854	0/0:14,0:14:39.05:0,39,410	0/0:25,0:26:66:0,66,704	0/0:16,0:16:45.11:0,45,490	1/1:0,24:24:71.95:616,72,0	1/1:4,21:25:53.97:468,54,0	1/1:4,16:20:47.98:417,48,0	1/1:3,18:21:50.60:442,51,0	0/0:10,0:10:27.06:0,27,284	0/0:15,0:15:42.11:0,42,465	0/0:16,0:15:42.11:0,42,465	0/0:20,0:20:60.14:0,60,652	0/0:3,0:3:9.02:0,9,100	0/0:16,1:17:16.04:0,16,397	0/0:16,0:16:42.11:0,42,465	0/1:10,2:12:24.95:25,0,195	1/1:2,16:18:47.98:417,48,0	1/1:1,17:18:44.99:391,45,0	1/1:2,13:15:32.99:287,33,0	1/1:0,19:19:44.99:391,45,0	0/1:24,3:27:9:9,0,582	0/0:26,0:26:66.18:0,66,727	0/1:1,1:3:17.20:17,0,39
chr10	73304147	.	A	AT	1763.59	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-8.770;DP=422;FS=14.158;HRun=8;HaplotypeScore=38.9088;InbreedingCoeff=0.9559;MQ=75.03;MQ0=0;MQRankSum=2.347;QD=26.72;ReadPosRankSum=0.538;VQSLOD=2.7586;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.03:0,63,576	0/0:3,0:3:6:0,6,55	0/0:13,0:13:33.02:0,33,302	0/0:10,0:10:8.03:0,8,103	0/0:12,0:12:33.02:0,33,302	0/0:11,0:11:24:0,24,220	0/0:13,0:13:39:0,39,351	0/0:26,0:26:53.57:0,54,485	0/0:15,0:15:36:0,36,329	0/0:21,0:21:60.03:0,60,549	0/0:19,0:19:51.02:0,51,466	1/1:1,8:9:21.06:242,21,0	1/1:2,9:11:30.09:345,30,0	0/0:12,0:12:33.02:0,33,302	0/0:11,0:11:27.01:0,27,246	0/0:7,0:7:21.01:0,21,192	0/0:27,0:27:81.04:0,81,741	0/0:11,0:11:26.85:0,27,247	0/0:15,0:15:45.02:0,45,412	0/0:21,0:21:57.03:0,57,522	0/0:16,0:16:42.02:0,42,384	1/1:2,7:9:21.06:242,21,0	1/1:1,23:24:60.18:692,60,0	1/1:0,13:13:36.11:415,36,0	0/0:15,0:15:42.02:0,42,384	0/0:21,0:21:63.02:0,63,572	0/0:17,0:17:48.03:0,48,439	0/0:19,0:19:48.02:0,48,439
chr10	73304517	.	T	TAAA	754.92	PASS	AB=0.944;AC=6;AF=0.107;AN=56;BaseQRankSum=3.670;DP=408;FS=3.776;HRun=12;HaplotypeScore=60.6506;InbreedingCoeff=0.5773;MQ=71.81;MQ0=1;MQRankSum=0.003;QD=13.02;ReadPosRankSum=-0.011;VQSLOD=0.9975;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,12:22:33.10:519,33,0	0/0:2,0:3:1.46:0,1,31	0/1:7,0:7:19.50:19,0,53	0/1:10,0:9:6.98:7,0,72	0/0:24,0:25:50.90:0,51,572	0/0:17,0:17:48.13:0,48,538	0/0:12,0:12:30.07:0,30,336	0/0:25,0:28:64.45:0,64,701	0/0:13,0:13:33:0,33,368	0/0:19,0:19:51:0,51,556	0/0:8,0:10:23.89:0,24,237	0/0:10,0:10:20.92:0,21,235	0/0:9,0:9:24.07:0,24,269	0/0:9,0:10:30:0,30,311	0/0:14,0:17:29.85:0,30,305	0/0:13,0:14:29.86:0,30,320	0/0:22,0:22:54.02:0,54,606	1/1:2,2:16:36.41:342,36,0	0/0:23,0:25:49.39:0,49,553	0/0:18,0:19:37.38:0,37,418	0/0:6,0:6:18.05:0,18,202	0/0:5,0:5:12.02:0,12,135	0/0:13,0:14:17.16:0,17,371	0/0:7,0:8:20.97:0,21,220	0/0:6,0:6:15.02:0,15,157	0/0:22,0:24:60:0,60,649	0/0:23,0:24:46.47:0,46,535	0/0:10,0:10:27.06:0,27,303
chr10	73305028	.	TA	T	1445.92	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=8.903;DP=543;FS=2.117;HRun=10;HaplotypeScore=84.9384;InbreedingCoeff=0.9088;MQ=80.84;MQ0=4;MQRankSum=-5.583;QD=17.42;ReadPosRankSum=-1.000;VQSLOD=3.7788;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:26:30.63:0,31,427	0/0:6,0:6:15.04:0,15,166	0/0:42,0:27:35.82:0,36,351	0/0:46,0:28:25.50:0,26,364	0/0:27,0:27:64:0,64,649	0/0:21,0:21:63.14:0,63,675	0/0:10,0:10:24.04:0,24,245	0/0:30,0:30:47.48:0,47,725	0/0:24,0:24:63.12:0,63,664	0/0:22,0:22:54.12:0,54,576	0/0:21,0:22:59.98:0,60,636	1/1:1,9:10:29.98:257,30,0	1/1:2,13:15:38.99:338,39,0	0/0:14,0:14:36.07:0,36,387	0/0:11,0:11:24.06:0,24,265	0/1:8,0:8:1.95:2,0,208	0/0:30,0:30:81.20:0,81,884	0/0:4,0:20:34.78:0,35,201	0/0:15,0:15:42.11:0,42,458	0/0:25,2:27:10.69:0,11,549	0/0:5,0:6:12.02:0,12,125	1/1:3,10:13:38.99:336,39,0	1/1:9,11:20:47.51:351,48,0	1/1:6,11:17:38.97:337,39,0	0/0:14,0:14:39.10:0,39,427	0/0:21,0:21:59.82:0,60,632	0/0:15,0:15:42.05:0,42,449	0/0:9,0:9:27.06:0,27,290
chr10	73305057	.	AC	A	868.94	PASS	AB=0.981;AC=14;AF=0.250;AN=56;BaseQRankSum=11.690;DP=572;FS=0.806;HRun=1;HaplotypeScore=89.7538;InbreedingCoeff=0.7677;MQ=69.37;MQ0=11;MQRankSum=-2.100;QD=6.53;ReadPosRankSum=2.899;VQSLOD=0.8413;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:45.74:0,46,358	0/0:7,0:7:21.05:0,21,263	0/0:50,2:25:33.48:0,33,466	0/0:50,1:26:28.40:0,28,410	0/0:31,0:31:50.89:0,51,821	0/0:22,0:22:66.18:0,66,826	0/0:10,0:10:30.10:0,30,393	0/0:28,0:28:74.97:0,75,926	0/0:19,0:19:57.16:0,57,718	0/1:21,0:21:10.06:81,0,10	0/1:25,1:26:90.76:118,0,91	1/1:12,0:12:4.24:66,4,0	1/1:12,0:12:29.17:124,29,0	0/0:16,0:16:44.97:0,45,536	0/0:10,0:10:24.02:0,24,302	0/0:18,0:18:54.15:0,54,697	0/0:28,0:28:84.24:0,84,1071	0/0:21,0:20:48.01:0,48,573	0/0:18,0:14:38.08:0,38,428	0/0:23,0:23:20.03:0,20,575	0/0:6,0:6:18.03:0,18,221	1/1:14,1:15:10.74:114,11,0	1/1:20,3:23:38.65:398,39,0	1/1:15,0:15:29.81:113,30,0	1/1:9,0:9:13.74:38,14,0	0/0:19,0:19:57.17:0,57,729	0/0:21,0:21:59.91:0,60,748	0/0:11,0:11:11.09:0,11,352
chr10	73305058	.	CA	C	3025.39	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=8.338;DP=579;FS=7.095;HRun=8;HaplotypeScore=83.5816;InbreedingCoeff=0.9956;MQ=67.87;MQ0=11;MQRankSum=-1.765;QD=22.58;ReadPosRankSum=4.158;VQSLOD=4.1395;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:40.81:0,41,182	0/0:7,0:7:18.06:0,18,217	0/0:51,0:25:39.57:0,40,382	0/0:51,0:25:20.76:0,21,367	0/0:31,0:31:89.48:0,89,993	0/0:22,0:22:57.17:0,57,684	0/0:10,0:10:30.09:0,30,362	0/0:27,0:28:78.04:0,78,885	0/0:19,0:19:51.15:0,51,611	1/1:1,20:21:57.09:549,57,0	1/1:9,17:26:48:450,48,0	1/1:2,10:12:33.05:318,33,0	1/1:0,12:12:33.05:318,33,0	0/0:17,0:17:48.12:0,48,555	0/0:10,0:10:30.07:0,30,342	0/0:18,0:18:54.17:0,54,652	0/0:29,0:29:87.25:0,87,1038	0/0:21,0:20:39.12:0,39,471	0/0:19,0:15:42.10:0,42,485	0/0:26,0:26:67.53:0,68,718	0/0:6,0:6:18.05:0,18,215	1/1:2,13:15:42.06:404,42,0	1/1:10,14:24:65.92:603,66,0	1/1:2,13:15:25.55:359,26,0	1/1:0,9:9:24.04:232,24,0	0/0:19,0:19:54.17:0,54,652	0/0:21,0:21:57.16:0,57,677	0/0:11,0:11:30.09:0,30,361
chr10	73305062	.	A	AAC	791.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.079;DP=571;FS=9.921;HRun=0;HaplotypeScore=100.1883;InbreedingCoeff=0.9844;MQ=66.97;MQ0=9;MQRankSum=-1.479;QD=30.42;ReadPosRankSum=0.674;VQSLOD=5.4759;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:26:51.14:886,51,0	0/0:7,0:7:21.06:0,21,299	0/0:47,0:25:46.65:0,47,552	0/0:42,0:22:35.76:0,36,425	0/0:34,0:34:99:0,102,1381	0/0:19,0:19:57.19:0,57,862	0/0:10,0:10:30.10:0,30,453	0/0:32,0:32:86.46:0,86,1164	0/0:19,0:19:54.17:0,54,790	0/0:20,0:20:56.51:0,57,402	0/0:24,0:24:61.96:0,62,451	0/0:12,0:12:35.70:0,36,257	0/0:14,0:14:38.72:0,39,287	0/0:17,0:17:51.15:0,51,715	0/0:10,0:10:30.08:0,30,415	0/0:19,0:19:57.19:0,57,845	0/0:31,0:31:87.28:0,87,1295	0/0:21,0:20:43.67:0,44,631	0/0:19,0:16:48.13:0,48,653	0/0:26,0:26:78.19:0,78,1011	0/0:6,0:6:18.06:0,18,267	0/0:15,0:15:44.60:0,45,319	0/0:23,0:23:66.62:0,67,472	0/0:16,0:16:44.17:0,44,306	0/0:10,0:10:23.79:0,24,170	0/0:18,0:18:54.18:0,54,817	0/0:21,0:21:63.18:0,63,895	0/0:11,0:11:33.07:0,33,473
chr10	73306125	.	C	CAGAGACAAA	8013.36	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=0.265;DP=656;FS=1.991;HRun=0;HaplotypeScore=191.4572;InbreedingCoeff=0.9563;MQ=79.51;MQ0=4;MQRankSum=-10.738;QD=67.34;ReadPosRankSum=-4.247;VQSLOD=4.1633;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,2867	0/0:7,0:7:18.06:0,18,494	0/0:64,0:47:32.43:0,32,1942	0/0:81,0:66:72.20:0,72,1914	0/0:30,0:30:75.26:0,75,1983	0/0:17,0:17:45.15:0,45,1311	0/0:24,0:24:62.02:0,62,1612	0/0:27,0:26:72.22:0,72,1731	0/0:15,0:15:39.12:0,39,1025	1/1:2,13:15:36.12:1162,36,0	1/1:4,5:10:18.02:422,18,0	1/1:7,12:23:51.06:1772,51,0	1/1:2,11:13:33.07:1358,33,0	0/0:23,0:23:54.19:0,54,1469	0/0:19,0:19:54.19:0,54,1384	0/0:16,0:16:42.13:0,42,1054	0/0:31,0:31:87.25:0,87,2283	0/0:10,0:10:21.07:0,21,531	0/0:25,0:24:51.15:0,51,1257	0/0:18,0:18:45.14:0,45,1182	0/0:54,0:54:99:0,139,3597	1/1:5,10:16:32.98:1199,33,0	1/1:3,8:14:41.93:1309,42,0	1/1:2,15:18:17.88:364,18,0	1/1:0,8:10:9.03:427,9,0	0/0:12,0:12:27.08:0,27,659	0/0:21,0:20:60.21:0,60,1675	0/0:1,0:1:3.01:0,3,89
chr10	73306295	.	C	CA	1762.35	PASS	AB=0.783;AC=19;AF=0.339;AN=56;BaseQRankSum=2.992;DP=520;FS=1.965;HRun=12;HaplotypeScore=77.8767;InbreedingCoeff=0.6377;MQ=76.09;MQ0=4;MQRankSum=-3.926;QD=9.32;ReadPosRankSum=-1.297;VQSLOD=2.8063;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:9,12:21:1.80:299,0,2	0/0:5,0:6:16.95:0,17,115	0/0:39,0:30:15.67:0,16,152	0/1:18,0:15:7.82:8,0,42	0/0:32,3:39:12.88:0,13,537	0/0:11,0:13:22.87:0,23,159	0/0:6,0:8:15.99:0,16,99	0/0:25,0:27:42.77:0,43,296	0/0:14,0:16:31.73:0,32,216	1/1:15,0:15:24.93:140,25,0	1/1:20,0:21:43.61:220,44,0	1/1:4,15:20:8:226,8,0	1/1:8,5:13:14.11:290,14,0	0/0:22,0:23:21.42:0,21,299	0/0:19,0:19:38.67:0,39,282	0/0:8,0:8:23.86:0,24,175	0/0:13,0:14:37.80:0,38,265	1/1:0,0:11:14.20:71,14,0	0/0:26,0:26:9.81:0,10,233	0/0:27,0:28:67.61:0,68,487	0/1:12,3:16:23.50:24,0,168	0/1:6,6:13:0.97:139,0,1	1/1:3,15:19:32.92:307,33,0	0/1:8,3:11:19.99:136,0,20	1/1:11,0:11:19.89:99,20,0	0/0:19,0:19:6.56:0,7,210	0/0:24,0:24:56.58:0,57,413	0/0:16,1:17:20.73:0,21,153
chr10	73306306	.	A	AAAAAAC	2713.56	PASS	AB=0.977;AC=8;AF=0.143;AN=56;BaseQRankSum=0.372;DP=524;FS=8.553;HRun=0;HaplotypeScore=131.5783;InbreedingCoeff=0.7634;MQ=75.35;MQ0=3;MQRankSum=-0.455;QD=28.56;ReadPosRankSum=-3.658;VQSLOD=2.1201;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:47.96:0,48,516	0/0:7,0:7:21.06:0,21,376	0/0:47,0:32:24.69:0,25,669	0/1:20,0:17:7.14:7,0,200	0/0:39,0:39:99:0,115,1951	0/0:11,0:11:27.04:0,27,495	0/0:10,0:10:27.04:0,27,406	0/0:28,0:28:71.99:0,72,1056	0/0:15,0:15:45.09:0,45,713	1/1:1,9:16:38.97:763,39,0	1/1:3,17:28:71.90:1426,72,0	0/0:20,0:20:37.79:0,38,342	0/0:14,0:14:35.98:0,36,337	0/0:20,0:20:56.85:0,57,1003	0/0:20,0:20:57.04:0,57,893	0/0:11,0:10:30.08:0,30,541	0/0:15,0:15:44.15:0,44,789	0/1:12,0:12:4.53:5,0,11	0/0:17,0:17:51.11:0,51,859	0/0:27,0:27:78.18:0,78,1459	0/0:16,0:16:42.09:0,42,691	0/0:10,0:10:28.70:0,29,248	0/0:17,0:17:28.61:0,29,269	0/0:12,0:12:27.69:0,28,298	1/1:1,11:17:21.07:662,21,0	0/0:15,0:15:45.10:0,45,741	0/0:26,0:26:78.19:0,78,1319	0/0:12,0:12:23.88:0,24,453
chr10	73306438	.	CATGAGAA	C	3132.88	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.002;DP=504;FS=7.009;HRun=0;HaplotypeScore=113.7701;InbreedingCoeff=0.9831;MQ=73.67;MQ0=0;MQRankSum=-9.517;QD=62.66;ReadPosRankSum=0.616;VQSLOD=3.1795;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.18:0,51,1999	0/0:5,0:5:15.05:0,15,600	0/0:9,0:9:24.08:0,24,854	0/0:12,0:12:30.04:0,30,899	0/0:29,0:29:87.28:0,87,3382	0/0:18,0:18:48.62:0,49,1825	0/0:6,0:6:15.05:0,15,600	0/0:26,0:26:72.24:0,72,2696	0/0:23,0:23:66.23:0,66,2630	1/1:3,23:26:66.21:1643,66,0	1/1:0,13:13:36.12:932,36,0	0/0:16,0:16:48.16:0,48,1904	0/0:14,0:14:39.13:0,39,1537	0/0:27,0:27:78.27:0,78,3097	0/0:14,0:14:39.13:0,39,1433	0/0:14,0:14:42.14:0,42,1657	0/0:21,0:21:54.17:0,54,2062	0/0:8,0:8:21.07:0,21,789	0/0:21,0:21:57.20:0,57,2208	0/0:30,0:30:87.30:0,87,3457	0/0:7,0:7:18.06:0,18,719	0/0:23,0:23:66.23:0,66,2598	0/0:25,0:25:75.26:0,75,2763	0/0:11,0:11:33.11:0,33,1216	1/1:1,10:11:27.09:701,27,0	0/0:21,0:21:60.18:0,60,2190	0/0:37,0:36:99:0,105,4142	0/0:18,0:18:54.15:0,54,1966
chr10	73306650	.	AAAGGAAGG	A	3819.19	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.289;DP=608;FS=3.278;HRun=0;HaplotypeScore=161.1085;InbreedingCoeff=0.9629;MQ=60.88;MQ0=2;MQRankSum=-9.965;QD=39.37;ReadPosRankSum=1.310;VQSLOD=3.5057;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:84.29:0,84,3233	0/0:8,0:8:21.07:0,21,801	0/0:19,0:15:17.65:0,18,428	0/0:12,0:11:6.02:0,6,143	0/0:35,0:35:87.28:0,87,3292	0/0:25,0:25:63.20:0,63,2445	0/0:14,0:14:39.13:0,39,1449	0/0:33,0:33:63.20:0,63,2058	0/0:15,0:15:36.10:0,36,1102	0/0:4,0:27:74.87:0,75,652	0/0:5,0:27:61.90:0,62,540	1/1:3,10:13:21.07:549,21,0	1/1:2,15:16:30.06:690,30,0	0/0:20,0:20:54.19:0,54,2252	0/0:14,0:14:33.11:0,33,1346	0/0:18,0:18:48.16:0,48,1858	0/0:25,0:25:54.18:0,54,2093	0/0:15,0:15:36.12:0,36,1152	0/0:21,0:19:42.14:0,42,1512	0/0:25,0:25:63.22:0,63,2579	0/0:10,0:10:24.08:0,24,945	1/1:4,23:27:57.15:1316,57,0	1/1:4,16:20:38.99:919,39,0	1/1:7,13:19:11.37:346,11,0	0/0:3,0:15:27:0,27,263	0/0:29,0:30:87.28:0,87,3325	0/0:43,0:43:99:0,102,3943	0/0:24,0:24:72.25:0,72,2989
chr10	73307289	.	TC	T	1684.26	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.170;DP=420;FS=13.948;HRun=1;HaplotypeScore=39.0404;InbreedingCoeff=0.9855;MQ=72.32;MQ0=1;MQRankSum=-2.324;QD=38.28;ReadPosRankSum=0.305;VQSLOD=2.2206;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.09:0,45,685	0/0:6,0:6:18.06:0,18,287	0/0:13,0:13:39.13:0,39,578	0/0:19,0:17:38.76:0,39,703	0/0:11,0:11:33.10:0,33,503	0/0:13,0:13:39.12:0,39,600	0/0:12,0:12:36.12:0,36,576	0/0:28,0:28:84.26:0,84,1281	0/0:14,0:14:42.13:0,42,647	1/1:1,15:16:48.14:652,48,0	1/1:0,12:12:36.12:504,36,0	0/0:15,0:15:45.14:0,45,689	0/0:12,0:12:30.10:0,30,475	0/0:16,0:16:48.16:0,48,767	0/0:12,0:12:36.11:0,36,550	0/0:14,0:14:42.13:0,42,646	0/0:19,0:19:57.13:0,57,832	0/0:4,0:4:12.04:0,12,192	0/0:14,0:14:42.13:0,42,647	0/0:14,0:14:42.14:0,42,671	0/0:32,0:32:93.30:0,93,1459	0/0:11,0:11:30.10:0,30,479	0/0:11,0:11:33.11:0,33,525	0/0:14,0:14:42.14:0,42,671	1/1:0,16:16:48.16:671,48,0	0/0:17,0:17:51.17:0,51,794	0/0:19,0:19:57.19:0,57,911	0/0:20,0:20:60.14:0,60,885
chr10	73307392	.	T	TTATA	326.93	PASS	AC=6;AF=0.136;AN=44;BaseQRankSum=1.457;DP=207;FS=0.000;HRun=0;HaplotypeScore=40.2343;InbreedingCoeff=0.5418;MQ=74.17;MQ0=0;MQRankSum=-0.568;QD=12.57;ReadPosRankSum=1.319;VQSLOD=2.4211;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,6:7:15.05:374,15,0	0/0:2,0:2:6.02:0,6,102	1/1:14,0:8:0:3,0,0	0/0:9,0:5:0.88:0,1,2	0/0:8,0:8:12:0,12,173	0/0:10,0:10:27.09:0,27,458	0/0:3,0:3:6.02:0,6,99	0/0:26,0:26:51.17:0,51,841	0/0:5,0:5:12.03:0,12,180	0/0:6,0:6:6.02:0,6,102	0/0:8,0:8:12.04:0,12,204	./.	./.	0/0:3,0:3:3.01:0,3,51	0/0:2,0:3:6.01:0,6,79	0/0:5,0:5:12.04:0,12,204	0/0:23,0:23:54.17:0,54,891	1/1:5,0:5:3.01:52,3,0	0/0:17,0:18:38.14:0,38,567	0/0:5,0:5:9.02:0,9,127	./.	./.	./.	./.	0/0:10,0:10:12.04:0,12,204	0/0:8,0:8:12.03:0,12,181	0/0:8,0:9:8.33:0,8,289	0/0:17,0:17:33.09:0,33,509
chr10	73307792	.	G	GT	801.46	PASS	AB=0.958;AC=5;AF=0.089;AN=56;BaseQRankSum=-7.362;DP=650;FS=0.000;HRun=9;HaplotypeScore=84.3642;InbreedingCoeff=0.3545;MQ=75.79;MQ0=0;MQRankSum=-3.435;QD=9.89;ReadPosRankSum=-1.679;VQSLOD=2.1277;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,37:47:40.98:891,41,0	0/1:6,1:7:12.18:12,0,135	0/0:13,0:13:2.11:0,2,114	0/1:15,0:15:0.03:0,0,90	0/0:27,0:27:71.98:0,72,624	0/0:22,0:22:53.86:0,54,458	0/0:20,0:21:59.01:0,59,498	0/0:27,2:29:2.55:0,3,466	0/0:29,0:29:80.97:0,81,700	0/0:25,0:25:71.97:0,72,621	0/0:25,0:26:52.64:0,53,424	0/0:26,0:26:56.98:0,57,489	0/0:21,0:21:50.98:0,51,438	0/0:16,0:16:44.99:0,45,390	0/0:38,0:38:99:0,102,882	0/0:18,0:18:47.98:0,48,417	0/0:23,0:24:64.94:0,65,544	0/0:8,0:8:17.99:0,18,156	0/0:32,0:32:74.97:0,75,648	0/0:29,0:29:74.95:0,75,646	0/0:28,0:28:71.93:0,72,617	0/0:16,0:16:47.03:0,47,393	0/0:22,0:22:52.99:0,53,441	0/0:17,0:17:35.86:0,36,309	0/1:12,0:12:3.11:3,0,204	0/0:33,0:33:83.97:0,84,726	0/0:30,0:30:77.95:0,78,673	0/0:19,0:19:56.99:0,57,495
chr10	73307844	.	GC	G	2490	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.535;DP=686;FS=8.966;HRun=2;HaplotypeScore=90.5212;InbreedingCoeff=0.9989;MQ=63.26;MQ0=0;MQRankSum=-0.593;QD=34.58;ReadPosRankSum=0.048;VQSLOD=3.3017;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,119,1755	0/0:8,0:8:24.08:0,24,360	0/0:23,0:20:57.19:0,57,840	0/0:29,0:28:72.21:0,72,1054	0/0:28,0:28:84.28:0,84,1256	0/0:23,0:23:69.22:0,69,1014	0/0:17,0:17:51.16:0,51,745	0/0:18,0:18:51.17:0,51,764	0/0:22,0:22:63.21:0,63,942	1/1:0,30:30:90.24:1133,90,0	1/1:3,20:23:60.19:769,60,0	0/0:27,0:27:81.26:0,81,1191	0/0:25,0:25:75.22:0,75,1099	0/0:22,0:22:66.20:0,66,947	0/0:31,0:31:90.30:0,90,1346	0/0:19,0:19:56.40:0,56,816	0/0:30,0:30:90.30:0,90,1348	0/0:9,0:9:27.09:0,27,405	0/0:27,0:27:81.27:0,81,1213	0/0:32,0:32:96.33:0,96,1436	0/0:43,0:43:99:0,129,1913	0/0:23,0:23:69.23:0,69,1031	0/0:27,0:27:78.26:0,78,1164	0/0:19,0:19:57.19:0,57,853	1/1:1,18:19:57.18:731,57,0	0/0:28,0:28:84.25:0,84,1200	0/0:27,0:27:78.25:0,78,1146	0/0:15,0:15:45.12:0,45,633
chr10	73314331	.	AG	A	1498.56	PASS	AC=34;AF=1.000;AN=34;DP=85;FS=0.000;HRun=6;HaplotypeScore=12.3441;InbreedingCoeff=-0.1011;MQ=23.33;MQ0=22;QD=20.25;VQSLOD=1.3900;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:10:30.07:319,30,0	./.	./.	./.	1/1:2,3:3:9.02:96,9,0	1/1:1,1:1:3.01:32,3,0	1/1:1,4:4:12.03:129,12,0	1/1:2,4:4:12.03:128,12,0	1/1:1,1:1:3.01:32,3,0	./.	1/1:2,4:4:9.02:96,9,0	./.	1/1:1,1:1:3.01:32,3,0	1/1:1,1:1:3.01:32,3,0	1/1:0,3:3:9.02:96,9,0	./.	1/1:3,6:7:18.04:193,18,0	./.	1/1:1,1:1:3.01:32,3,0	./.	1/1:1,2:2:6.02:64,6,0	1/1:1,1:1:3.01:32,3,0	./.	./.	./.	1/1:0,5:4:12.03:129,12,0	1/1:1,3:3:9.02:96,9,0	1/1:4,1:1:3.01:32,3,0
chr10	73314408	.	A	AT	253.67	PASS	AB=1.000;AC=7;AF=0.140;AN=50;BaseQRankSum=-2.123;DP=247;FS=8.897;HRun=0;HaplotypeScore=42.4257;InbreedingCoeff=0.5965;MQ=60.98;MQ0=19;MQRankSum=-1.823;QD=9.06;ReadPosRankSum=0.967;VQSLOD=2.0860;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:20.71:0,21,137	./.	0/0:36,0:13:22.18:0,22,139	0/0:18,0:7:3.88:0,4,17	0/0:6,0:6:8.52:0,9,87	0/0:10,0:9:26.02:0,26,265	0/0:6,0:6:14.49:0,14,138	0/0:13,0:12:16.16:0,16,246	0/0:4,0:4:8.90:0,9,60	1/1:5,3:7:18.44:152,18,0	1/1:6,3:6:17.87:154,18,0	0/1:6,0:5:13.57:14,0,15	./.	0/0:13,0:12:34.57:0,35,314	0/0:4,0:4:11.22:0,11,109	0/0:6,0:6:14.73:0,15,135	0/0:20,0:17:46.06:0,46,424	0/0:6,0:5:5.02:0,5,21	0/0:5,0:5:14.93:0,15,127	0/0:8,0:7:10.50:0,10,79	0/0:7,0:7:17.81:0,18,146	./.	0/0:5,0:4:6.12:0,6,32	0/0:6,0:4:2.51:0,3,8	1/1:4,1:5:9.36:70,9,0	0/0:15,0:14:36.34:0,36,372	0/0:10,0:10:28.03:0,28,245	0/0:6,0:3:3.01:0,3,35
chr10	73314683	.	A	ATTCTT	1024.96	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=0.944;DP=392;FS=0.802;HRun=0;HaplotypeScore=96.3049;InbreedingCoeff=0.8126;MQ=70.86;MQ0=11;MQRankSum=-1.452;QD=12.20;ReadPosRankSum=-1.879;VQSLOD=2.5076;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:54.03:0,54,615	0/0:4,0:4:6.02:0,6,86	0/0:37,0:11:2.08:0,2,28	0/0:41,0:23:42.64:0,43,334	0/0:15,0:15:36.34:0,36,371	0/0:13,0:13:7.21:0,7,340	0/0:12,0:12:23.59:0,24,340	0/0:13,0:13:17.23:0,17,158	0/0:10,0:10:11.92:0,12,153	1/1:10,9:19:11.45:226,11,0	1/1:18,0:18:32.80:396,33,0	1/1:9,0:9:5.97:57,6,0	1/1:9,0:9:5.56:37,6,0	0/0:14,0:14:27.93:0,28,311	0/0:9,0:9:17.58:0,18,185	0/0:9,0:9:11.75:0,12,125	0/0:15,0:13:7.14:0,7,153	0/0:13,0:12:15.23:0,15,169	0/0:20,0:20:32.45:0,32,320	0/0:8,0:8:10.78:0,11,166	0/0:9,0:9:11.90:0,12,137	1/1:2,0:2:6.02:67,6,0	1/1:8,0:8:9.28:54,9,0	1/1:6,0:6:11.93:108,12,0	1/1:12,1:12:15:267,15,0	0/0:16,0:15:22.06:0,22,299	0/0:10,0:9:14.83:0,15,171	0/0:11,0:9:18.01:0,18,185
chr10	73314687	.	T	TTTTC	1078.56	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=1.353;DP=427;FS=1.565;HRun=0;HaplotypeScore=98.8071;InbreedingCoeff=0.7259;MQ=61.05;MQ0=30;MQRankSum=-0.729;QD=12.26;ReadPosRankSum=-0.681;VQSLOD=3.2275;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:59.18:0,59,610	0/0:4,0:4:6.02:0,6,85	0/0:33,0:6:2.08:0,2,28	0/0:41,0:23:38.79:0,39,312	0/0:18,0:17:39.31:0,39,384	0/0:14,0:13:11.20:0,11,327	0/0:15,0:14:27.34:0,27,336	0/0:17,0:17:17.43:0,17,165	0/0:8,0:8:11.85:0,12,146	1/1:18,0:18:8.50:261,9,0	1/1:5,12:17:31.60:390,32,0	0/1:8,0:8:7.83:68,0,8	1/1:9,0:9:10.43:56,10,0	0/0:16,0:16:33.03:0,33,349	0/0:12,0:12:10.32:0,10,166	0/0:12,0:11:20.86:0,21,154	0/0:28,0:23:25.75:0,26,216	0/0:15,0:11:22.65:0,23,182	0/0:18,0:17:33.32:0,33,312	0/0:8,0:8:21.80:0,22,205	0/0:8,0:7:13.25:0,13,132	0/1:5,0:4:6.63:71,0,7	1/1:10,0:9:10.01:54,10,0	1/1:9,0:6:10.95:106,11,0	1/1:12,0:11:17.21:253,17,0	0/0:18,0:17:30.34:0,30,305	0/0:12,0:10:17.86:0,18,190	0/0:13,0:9:18.01:0,18,178
chr10	73314688	.	T	TTTC	761.72	PASS	AB=0.893;AC=10;AF=0.179;AN=56;BaseQRankSum=-1.065;DP=436;FS=2.513;HRun=0;HaplotypeScore=87.7063;InbreedingCoeff=0.3513;MQ=57.84;MQ0=33;MQRankSum=1.168;QD=8.37;ReadPosRankSum=0.282;VQSLOD=3.0982;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:59.78:0,60,585	0/0:4,0:4:6.02:0,6,74	0/0:32,0:5:2.08:0,2,28	0/0:40,0:22:32.21:0,32,286	0/0:19,0:18:34.05:0,34,363	0/0:15,0:14:31.23:0,31,346	0/0:14,0:13:32.88:0,33,335	0/0:15,0:15:17.63:0,18,169	0/0:8,0:8:11.24:0,11,137	0/1:18,0:18:9.30:216,0,9	0/1:18,0:18:12.63:257,0,13	0/1:4,4:9:29.91:40,0,30	1/1:9,0:9:10.23:46,10,0	0/0:16,0:16:33.93:0,34,336	0/0:12,0:12:29.12:0,29,211	0/0:13,0:12:22.23:0,22,183	0/0:29,0:24:35.56:0,36,281	0/0:17,0:11:23.70:0,24,193	0/0:18,0:17:35.64:0,36,329	0/0:9,0:9:23.65:0,24,218	0/0:8,0:7:15.80:0,16,139	0/1:3,2:4:0.26:98,0,0	0/1:10,0:9:6.24:33,0,6	1/1:10,0:7:9.88:104,10,0	0/1:12,0:11:7.88:117,0,8	0/0:19,0:18:37.31:0,37,342	0/0:12,0:10:20.97:0,21,201	0/0:13,0:9:18.01:0,18,173
chr10	73314690	.	T	TC	326.02	PASS	AB=0.929;AC=8;AF=0.143;AN=56;BaseQRankSum=1.687;DP=447;FS=31.760;HRun=0;HaplotypeScore=64.5192;InbreedingCoeff=-0.1403;MQ=53.92;MQ0=45;MQRankSum=2.694;QD=3.62;ReadPosRankSum=2.001;VQSLOD=1.5252;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:31:71.68:0,72,586	0/0:4,0:4:5.85:0,6,44	0/0:30,0:3:2.18:0,2,32	0/0:40,0:22:29.50:0,29,272	0/0:20,0:18:44.04:0,44,347	0/0:15,0:14:38.86:0,39,366	0/0:15,0:14:37.05:0,37,317	0/0:15,0:15:29.44:0,29,228	0/0:8,0:8:11.70:0,12,114	0/1:18,0:17:88.59:113,0,89	0/1:16,0:16:17.86:137,0,18	0/1:8,0:8:6.40:6,0,54	0/1:3,5:9:19.28:52,0,19	0/0:15,0:15:35.22:0,35,268	0/0:11,0:11:30.19:0,30,224	0/0:14,0:12:28.77:0,29,210	0/0:31,0:24:59.32:0,59,419	0/0:21,0:12:23.84:0,24,188	0/0:19,0:18:40.32:0,40,332	0/0:10,0:9:24.42:0,24,215	0/0:8,0:7:15.85:0,16,133	0/1:5,0:4:27.58:29,0,28	0/1:8,2:9:15.40:15,0,54	0/1:11,0:7:8.48:71,0,8	0/1:13,0:12:34.64:35,0,66	0/0:21,0:19:50.22:0,50,397	0/0:13,0:9:24.81:0,25,199	0/0:13,0:9:18.01:0,18,163
chr10	73314990	.	AAAAG	A	3465.85	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.157;DP=582;FS=5.689;HRun=0;HaplotypeScore=96.6726;InbreedingCoeff=0.9938;MQ=91.51;MQ0=0;MQRankSum=-3.053;QD=45.01;ReadPosRankSum=3.354;VQSLOD=4.1418;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,2541	0/0:6,0:6:15.04:0,15,364	0/0:28,0:27:71.04:0,71,1721	0/0:22,0:22:57.13:0,57,1314	0/0:30,0:30:84.28:0,84,2278	0/0:14,0:13:42.14:0,42,1104	0/0:23,0:23:69.18:0,69,1780	0/0:35,0:35:99:0,99,2546	0/0:24,0:24:72.25:0,72,1958	0/0:26,0:26:78.25:0,78,1981	0/0:12,0:12:36.12:0,36,973	1/1:1,11:12:21.07:419,21,0	1/1:0,19:19:48.16:957,48,0	0/0:28,0:28:81.25:0,81,2087	0/0:29,0:29:84.24:0,84,2169	0/0:20,0:20:60.20:0,60,1592	0/0:21,0:21:63.19:0,63,1648	0/0:9,0:9:27.09:0,27,755	0/0:23,0:23:69.21:0,69,1748	0/0:11,0:11:33.10:0,33,857	0/0:19,0:19:57.17:0,57,1376	1/1:1,13:14:27.09:539,27,0	1/1:0,14:14:32.99:658,33,0	1/1:0,18:18:44.97:892,45,0	0/0:8,0:8:21.07:0,21,552	0/0:31,0:31:90.27:0,90,2261	0/0:35,0:35:99:0,105,2621	0/0:17,0:17:51.18:0,51,1383
chr10	73315688	.	TCAAAAAA	T	5255.91	PASS	AB=0.960;AC=17;AF=0.315;AN=54;BaseQRankSum=11.497;DP=479;FS=8.189;HRun=0;HaplotypeScore=115.2199;InbreedingCoeff=0.8812;MQ=61.29;MQ0=0;MQRankSum=-11.914;QD=36.75;ReadPosRankSum=2.581;VQSLOD=3.9971;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:51.15:0,51,1703	0/0:11,0:11:18.04:0,18,577	0/0:12,0:12:23.88:0,24,489	./.	0/0:31,0:31:65.82:0,66,2292	0/0:23,0:23:51.18:0,51,1880	0/0:13,0:13:33.10:0,33,1039	0/0:27,0:27:54.18:0,54,1822	0/0:23,0:23:57.20:0,57,2093	1/1:12,9:21:33.07:695,33,0	1/1:7,15:21:39.12:848,39,0	1/1:1,9:10:27.09:617,27,0	1/1:7,9:16:36.09:734,36,0	0/0:12,0:12:30.10:0,30,1044	0/0:18,0:18:39.13:0,39,1439	0/0:20,0:20:42.12:0,42,1434	0/0:16,0:16:33.07:0,33,1042	0/0:10,0:10:18.06:0,18,664	0/0:21,0:21:36.12:0,36,1283	0/0:25,0:25:51.16:0,51,1763	0/0:7,0:7:15.05:0,15,553	1/1:7,10:17:33.11:736,33,0	1/1:4,10:14:30.10:686,30,0	1/1:1,2:3:3.01:69,3,0	1/1:4,12:16:39.13:856,39,0	0/1:23,1:24:14.43:14,0,1828	0/0:26,0:26:54.17:0,54,1869	0/0:16,0:16:45.15:0,45,1659
chr10	73315757	.	TG	T	3099.14	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=13.329;DP=437;FS=3.198;HRun=2;HaplotypeScore=55.0770;InbreedingCoeff=0.9794;MQ=68.99;MQ0=0;MQRankSum=-6.401;QD=30.99;ReadPosRankSum=-0.398;VQSLOD=3.0515;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.22:0,69,1010	0/0:9,0:9:24.08:0,24,357	0/0:10,0:10:21.06:0,21,290	./.	0/0:29,0:29:87.25:0,87,1240	0/0:23,0:23:69.23:0,69,1032	0/0:10,0:10:30.09:0,30,431	0/0:31,0:31:90.27:0,90,1304	0/0:18,0:18:48.14:0,48,681	1/1:1,16:17:51.09:622,51,0	1/1:2,17:18:51.01:602,51,0	1/1:0,12:12:30.05:369,30,0	1/1:1,7:7:21.03:252,21,0	0/0:10,0:10:30.09:0,30,429	0/0:14,0:14:39.12:0,39,566	0/0:18,0:18:54.18:0,54,809	0/0:12,0:12:36.11:0,36,520	0/0:16,0:16:48.16:0,48,719	0/0:22,0:22:63.19:0,63,886	0/0:22,0:22:63.20:0,63,924	0/0:8,0:8:24.08:0,24,359	1/1:0,11:11:32.95:369,33,0	1/1:0,10:10:30.10:388,30,0	1/1:0,7:7:18:213,18,0	1/1:1,15:16:42:486,42,0	0/0:14,1:15:6.35:0,6,553	0/0:31,0:31:93.26:0,93,1312	0/0:13,0:13:30.07:0,30,407
chr10	73315980	.	CGG	C	1918.06	PASS	AB=0.952;AC=22;AF=0.393;AN=56;BaseQRankSum=9.807;DP=517;FS=16.543;HRun=4;HaplotypeScore=61.9483;InbreedingCoeff=0.8101;MQ=52.50;MQ0=44;MQRankSum=-6.683;QD=9.22;ReadPosRankSum=1.591;VQSLOD=-0.6162;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:20,4:26:56.27:519,56,0	0/0:5,0:5:9.03:0,9,154	0/1:65,2:10:74.07:74,0,86	0/0:64,0:10:13.22:0,13,157	0/0:24,0:23:47.97:0,48,764	0/0:15,0:15:33.07:0,33,477	0/0:15,0:15:24.01:0,24,288	0/0:18,0:16:39.50:0,39,463	0/0:14,0:12:30.10:0,30,520	1/1:4,5:8:23.29:276,23,0	1/1:1,4:5:6:62,6,0	1/1:15,3:18:12:144,12,0	1/1:8,2:10:6.02:72,6,0	0/0:16,0:15:30.54:0,31,417	0/1:13,0:13:1.19:1,0,438	0/0:13,0:13:39.08:0,39,587	0/0:34,0:33:90.12:0,90,1326	1/1:10,4:14:33.07:416,33,0	0/0:15,0:14:39.04:0,39,599	0/0:19,0:19:47.69:0,48,672	0/0:11,0:9:26.98:0,27,339	1/1:13,2:13:12.03:146,12,0	1/1:10,2:11:15.05:197,15,0	1/1:10,0:9:11.81:153,12,0	1/1:4,0:4:8.90:65,9,0	0/0:21,0:20:45.07:0,45,755	0/0:16,0:15:38.49:0,38,541	0/0:8,0:6:15.05:0,15,243
chr10	73315982	.	GGGA	G	1706.76	PASS	AB=0.972;AC=16;AF=0.286;AN=56;BaseQRankSum=9.760;DP=521;FS=17.420;HRun=0;HaplotypeScore=69.8999;InbreedingCoeff=0.4467;MQ=51.29;MQ0=46;MQRankSum=-6.112;QD=8.45;ReadPosRankSum=2.174;VQSLOD=1.4433;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,3:30:30.49:365,0,30	0/0:6,0:6:11.71:0,12,169	0/1:68,0:10:59.71:60,0,163	0/0:63,0:8:13.22:0,13,168	0/0:25,0:24:50.82:0,51,910	0/0:14,0:14:33.58:0,34,540	0/0:14,0:14:26.91:0,27,367	0/0:17,0:15:39.01:0,39,546	0/0:13,0:11:30.10:0,30,602	0/1:12,0:10:6.11:208,0,6	0/1:7,0:6:18.22:47,0,18	1/1:4,11:15:14.83:172,15,0	1/1:3,5:9:6.91:94,7,0	0/0:17,0:16:26.81:0,27,463	0/0:15,0:14:1.79:0,2,487	0/0:14,0:14:38.59:0,39,717	0/0:33,0:32:90.18:0,90,1551	0/1:18,1:17:5.80:321,0,6	0/0:17,0:16:44.62:0,45,700	0/0:18,0:18:46.09:0,46,727	0/0:11,0:9:26.99:0,27,364	1/1:4,8:12:11.39:156,11,0	1/1:4,8:12:16.93:261,17,0	1/1:4,4:8:11.61:160,12,0	0/1:6,0:6:30.03:43,0,30	0/0:19,0:18:48.04:0,48,844	0/0:15,0:14:31.51:0,32,598	0/0:8,0:6:18.06:0,18,314
chr10	73317177	.	G	GT	1634.89	PASS	AB=0.923;AC=17;AF=0.304;AN=56;BaseQRankSum=8.225;DP=564;FS=4.925;HRun=10;HaplotypeScore=77.2126;InbreedingCoeff=0.8800;MQ=66.10;MQ0=11;MQRankSum=-5.498;QD=12.02;ReadPosRankSum=-0.361;VQSLOD=3.3024;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:62.86:0,63,512	0/0:3,0:3:8.99:0,9,74	0/0:66,0:24:40.18:0,40,275	0/0:46,0:15:8.90:0,9,92	0/0:14,0:14:38.94:0,39,320	0/0:14,0:14:41.63:0,42,331	0/0:16,0:15:29.95:0,30,246	0/0:27,0:27:65.87:0,66,534	0/0:23,0:23:62.90:0,63,513	1/1:4,16:21:23.33:425,23,0	1/1:4,15:19:37.76:403,38,0	1/1:4,2:13:25.90:164,26,0	1/1:4,2:13:31.87:199,32,0	0/0:15,0:15:35.92:0,36,292	0/0:21,0:21:59.89:0,60,485	0/0:19,0:19:47.92:0,48,391	0/0:24,1:25:55.95:0,56,449	0/0:25,0:24:32.82:0,33,265	0/1:21,2:23:8.41:8,0,326	0/0:8,0:8:23.97:0,24,197	0/0:19,0:19:50.94:0,51,418	1/1:3,0:13:28.44:143,28,0	1/1:3,1:7:14.54:106,15,0	1/1:5,1:11:26:155,26,0	1/1:5,8:13:5.38:235,5,0	0/0:22,0:22:47.91:0,48,394	0/0:23,1:24:21.94:0,22,386	0/0:5,0:5:14.98:0,15,123
chr10	73317195	.	G	GT	1016.22	PASS	AB=0.909;AC=19;AF=0.339;AN=56;BaseQRankSum=6.378;DP=586;FS=1.614;HRun=11;HaplotypeScore=79.0355;InbreedingCoeff=0.7063;MQ=60.14;MQ0=13;MQRankSum=-4.410;QD=4.58;ReadPosRankSum=1.493;VQSLOD=1.4538;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,29:35:42.87:605,43,0	0/0:5,0:5:14.94:0,15,114	0/0:66,0:19:13.55:0,14,83	0/1:49,0:12:11.51:12,0,16	0/0:18,0:20:48.67:0,49,341	0/0:16,0:15:37.41:0,37,281	0/0:13,0:12:13.53:0,14,133	0/0:24,0:26:13.95:0,14,275	0/0:21,0:22:58.82:0,59,447	0/1:17,0:18:11.51:27,0,12	1/1:13,0:17:12.61:89,13,0	1/1:7,0:11:11.36:57,11,0	1/1:10,0:14:9.23:56,9,0	0/0:12,0:12:29.88:0,30,232	0/0:23,0:23:58.59:0,59,446	0/0:19,0:19:46.86:0,47,354	0/0:30,1:33:54.22:0,54,574	1/1:4,1:23:26.83:148,27,0	0/0:26,0:23:34.87:0,35,261	0/0:10,0:10:23.90:0,24,186	0/0:15,0:15:41.19:0,41,305	1/1:8,0:12:10.44:58,10,0	1/1:2,0:9:8.43:41,8,0	1/1:4,0:12:16.66:90,17,0	0/1:11,0:13:6.92:32,0,7	0/0:23,2:25:1.50:0,1,351	0/0:23,0:24:66.04:0,66,496	0/0:7,0:7:20.92:0,21,162
chr10	73318421	.	CTAAG	C	7866.37	PASS	AB=0.933;AC=17;AF=0.304;AN=56;BaseQRankSum=15.146;DP=632;FS=4.110;HRun=0;HaplotypeScore=105.6701;InbreedingCoeff=0.9157;MQ=89.81;MQ0=1;MQRankSum=-3.668;QD=39.14;ReadPosRankSum=2.538;VQSLOD=5.1788;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.23:0,72,1863	0/0:12,0:12:36.12:0,36,958	0/0:28,0:28:63.17:0,63,1536	0/0:22,0:22:46.40:0,46,1205	0/0:21,0:21:60.21:0,60,1576	0/0:25,0:25:72.23:0,72,1853	0/0:14,0:14:42.14:0,42,1093	0/0:27,0:27:75.24:0,75,1820	0/0:19,0:19:57.20:0,57,1510	1/1:1,31:31:84.29:1559,84,0	1/1:3,21:24:57.11:1024,57,0	1/1:1,21:22:57.20:1060,57,0	1/1:1,20:21:54.19:1007,54,0	0/0:22,0:22:66.23:0,66,1755	0/0:25,0:25:75.24:0,75,1935	0/0:17,0:17:51.18:0,51,1345	0/0:24,0:24:69.22:0,69,1718	0/0:18,0:18:48.16:0,48,1260	0/0:16,0:16:42.14:0,42,1076	0/0:28,0:28:84.27:0,84,2149	0/0:26,0:26:75.26:0,75,1979	1/1:0,18:18:45.11:799,45,0	1/1:0,20:20:48.16:891,48,0	1/1:0,14:14:26.61:503,27,0	1/1:0,22:22:54.19:1000,54,0	0/1:26,2:28:22.48:22,0,1908	0/0:50,0:50:99:0,141,3529	0/0:10,0:10:30.10:0,30,787
chr10	73318878	.	A	AT	136.25	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.585;DP=424;FS=1.523;HRun=6;HaplotypeScore=44.6201;InbreedingCoeff=0.6227;MQ=68.81;MQ0=0;MQRankSum=-2.487;QD=10.48;ReadPosRankSum=-0.455;VQSLOD=0.5384;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:50.54:0,51,467	0/0:7,0:7:18.04:0,18,184	0/1:7,0:7:2.93:3,0,40	0/0:4,0:4:2.95:0,3,19	0/0:21,0:21:51.11:0,51,520	0/0:17,0:17:45.05:0,45,439	0/0:7,0:7:21.04:0,21,209	0/0:35,0:35:99:0,99,1004	0/0:13,0:13:30.03:0,30,291	0/0:23,0:23:63.13:0,63,634	0/0:23,0:23:60.13:0,60,611	0/0:11,0:11:33.08:0,33,337	0/0:12,0:12:33.05:0,33,325	0/0:12,0:12:30.04:0,30,293	0/0:18,0:18:54.11:0,54,544	0/0:9,0:9:21.02:0,21,202	0/0:19,0:19:54.10:0,54,543	1/1:0,6:6:18.06:226,18,0	0/0:26,0:26:66.10:0,66,654	0/0:21,0:21:48.09:0,48,484	0/0:11,0:11:33.06:0,33,331	0/0:6,0:6:18.04:0,18,184	0/0:18,0:18:51.10:0,51,511	0/0:6,0:6:15.03:0,15,153	0/0:19,0:19:39.08:0,39,393	0/0:21,0:21:51.08:0,51,512	0/0:24,0:24:66.13:0,66,665	0/0:9,0:9:21.05:0,21,214
chr10	73319046	.	CT	C	378.87	PASS	AB=0.901;AC=11;AF=0.204;AN=54;BaseQRankSum=3.161;DP=399;FS=0.000;HRun=15;HaplotypeScore=54.0597;InbreedingCoeff=0.3463;MQ=68.43;MQ0=6;MQRankSum=4.184;QD=3.64;ReadPosRankSum=3.056;VQSLOD=-0.4465;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:14.76:0,15,93	0/1:2,1:3:13.27:13,0,20	0/1:15,1:12:16.74:29,0,17	0/1:8,0:6:5.68:9,0,6	0/0:31,2:31:15.24:0,15,344	0/1:13,2:16:5.52:6,0,204	0/0:12,0:12:21.42:0,21,178	0/0:30,2:33:19.50:0,19,265	0/0:11,0:11:17.96:0,18,152	1/1:9,10:19:22.99:153,23,0	1/1:7,8:16:2.22:133,2,0	0/0:7,0:7:14.98:0,15,127	0/0:8,0:8:5.91:0,6,39	0/1:11,1:12:4.31:4,0,83	0/0:12,0:12:20.97:0,21,177	0/0:7,0:7:8.92:0,9,70	0/0:25,5:28:17.24:0,17,272	0/0:14,0:14:26.99:0,27,237	0/0:18,1:18:1.53:0,2,117	0/0:18,1:19:20.14:0,20,287	0/0:11,0:9:11.74:0,12,91	./.	0/0:3,0:3:2.99:0,3,23	0/0:6,0:6:9.88:0,10,81	1/1:2,11:14:28.59:179,29,0	0/0:18,1:18:14.18:0,14,240	0/0:22,1:22:15.23:0,15,239	0/0:16,0:15:35.35:0,35,294
chr10	73320029	.	G	GA	1976.82	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-8.783;DP=542;FS=14.748;HRun=8;HaplotypeScore=52.3986;InbreedingCoeff=0.9868;MQ=67.29;MQ0=0;MQRankSum=-1.930;QD=24.11;ReadPosRankSum=0.390;VQSLOD=2.8969;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:20.64:0,21,334	0/0:5,0:5:15.01:0,15,137	0/0:16,0:16:29.23:0,29,291	0/0:7,0:7:17.96:0,18,156	0/0:35,0:35:93:0,93,838	0/0:24,0:24:69.02:0,69,627	0/0:8,0:8:15:0,15,137	0/0:24,0:24:59.97:0,60,537	0/0:25,0:25:72.02:0,72,654	0/0:26,0:26:69.03:0,69,631	0/0:28,0:28:68.98:0,69,618	1/1:0,12:13:32.93:361,33,0	1/1:2,12:14:36.11:415,36,0	0/0:17,0:17:51.03:0,51,467	0/0:18,0:18:51:0,51,461	0/0:17,0:17:48.03:0,48,439	0/0:19,0:19:53.91:0,54,472	0/0:12,0:12:29.95:0,30,265	0/0:15,0:15:32.96:0,33,294	0/0:35,0:35:99:0,102,933	0/0:9,0:9:18:0,18,165	1/1:2,16:18:39.07:435,39,0	1/1:4,23:27:35.73:665,36,0	1/1:1,9:10:24.07:276,24,0	0/0:27,0:27:49.22:0,49,585	0/0:23,0:23:60.03:0,60,549	0/0:35,0:35:84.01:0,84,763	0/0:18,0:18:50.98:0,51,458
chr10	73320620	.	TTTAC	T	2576.06	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.793;DP=576;FS=1.104;HRun=0;HaplotypeScore=98.4664;InbreedingCoeff=0.9948;MQ=63.21;MQ0=1;MQRankSum=0.676;QD=31.80;ReadPosRankSum=2.706;VQSLOD=3.7892;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.13:0,78,1587	0/0:12,0:12:30.05:0,30,595	0/0:13,0:11:27.02:0,27,460	0/0:16,0:14:35.64:0,36,697	0/0:29,0:29:63.22:0,63,1559	0/0:26,0:26:72.13:0,72,1597	0/0:15,0:15:39.05:0,39,901	0/0:35,0:35:90.17:0,90,1704	0/0:16,0:16:45.14:0,45,1042	0/0:31,0:31:81.25:0,81,1794	0/0:22,0:22:66.16:0,66,1444	1/1:1,18:19:39.13:674,39,0	1/1:5,11:16:33.11:558,33,0	0/0:19,0:19:57.17:0,57,1295	0/0:21,0:21:57.13:0,57,1210	0/0:18,0:18:51.16:0,51,1166	0/0:23,0:23:63.11:0,63,1430	0/0:19,0:19:54.07:0,54,1147	0/0:24,0:24:54.16:0,54,1161	0/0:30,0:30:75.23:0,75,1740	0/0:15,0:15:45.12:0,45,978	1/1:4,13:17:39.09:641,39,0	1/1:1,17:18:35.98:526,36,0	1/1:2,9:11:21.07:352,21,0	0/0:16,0:16:42.13:0,42,985	0/0:33,0:33:81.23:0,81,1693	0/0:26,0:26:69.20:0,69,1611	0/0:5,0:6:15.05:0,15,351
chr10	73322224	.	C	CACTA	14064.57	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-15.084;DP=693;FS=12.572;HRun=0;HaplotypeScore=101.9859;InbreedingCoeff=0.9941;MQ=70.67;MQ0=4;MQRankSum=-2.800;QD=59.09;ReadPosRankSum=2.264;VQSLOD=6.3749;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:26:66.23:1741,66,0	0/0:11,0:11:33.11:0,33,607	0/0:26,0:26:63.19:0,63,1103	0/0:29,0:29:73.45:0,73,1258	0/0:25,0:25:69.24:0,69,1249	0/0:24,0:24:69.21:0,69,1197	0/0:23,0:23:60.19:0,60,1043	0/0:31,0:31:90.30:0,90,1609	0/0:21,0:21:54.17:0,54,961	1/1:10,25:33:78.27:1981,78,0	1/1:2,12:16:39.09:937,39,0	1/1:4,8:13:24.08:632,24,0	1/1:3,20:23:60.21:1585,60,0	0/0:25,0:25:75.26:0,75,1365	0/0:28,0:28:84.25:0,84,1477	0/0:32,0:32:87.30:0,87,1598	0/0:37,0:37:99:0,111,2029	1/1:7,9:15:30.10:789,30,0	0/0:15,0:15:45.15:0,45,826	0/0:28,0:28:81.28:0,81,1487	0/0:29,0:29:78.27:0,78,1433	1/1:3,23:27:69.24:1766,69,0	1/1:3,26:29:66.16:1718,66,0	1/1:4,20:25:54.66:1425,55,0	1/1:2,22:25:57.20:1491,57,0	0/0:29,1:30:11.24:0,11,1511	0/0:20,0:20:54.16:0,54,931	0/0:21,0:21:63.22:0,63,1159
chr10	73322971	.	G	GTTT	60.86	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.983;DP=513;FS=0.000;HRun=0;HaplotypeScore=94.1749;InbreedingCoeff=0.9337;MQ=77.26;MQ0=7;MQRankSum=-1.813;QD=5.53;ReadPosRankSum=-0.241;VQSLOD=2.2414;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:4:12.04:0,12,148	0/0:9,0:9:27.09:0,27,476	0/0:54,0:23:42.95:0,43,616	0/0:51,0:23:49.33:0,49,484	0/0:26,0:26:75.26:0,75,1347	0/0:9,0:9:27.09:0,27,472	0/0:10,0:10:27.06:0,27,453	0/0:34,0:34:90.27:0,90,1456	0/0:9,0:9:27.05:0,27,404	0/0:30,0:30:84.28:0,84,1436	0/0:22,0:22:57.18:0,57,945	0/0:8,0:8:20.87:0,21,231	0/0:9,0:9:24:0,24,231	0/0:10,0:10:30.10:0,30,538	0/0:13,0:13:39.13:0,39,682	0/0:11,0:11:30.10:0,30,535	0/0:21,0:21:57.19:0,57,1003	1/1:4,5:11:13.02:148,13,0	0/0:16,0:16:48.16:0,48,842	0/0:18,0:18:48.13:0,48,795	0/0:17,0:17:51.17:0,51,869	0/0:14,0:14:35.98:0,36,461	0/0:18,0:18:47.53:0,48,580	0/0:11,0:11:30.10:0,30,419	0/0:18,0:18:45.15:0,45,768	0/0:13,0:13:36.12:0,36,642	0/0:23,0:23:69.22:0,69,1146	0/0:21,0:21:60.15:0,60,1007
chr10	73322986	.	T	TA	2521.39	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=8.026;DP=491;FS=0.438;HRun=2;HaplotypeScore=66.9799;InbreedingCoeff=0.9648;MQ=70.62;MQ0=10;MQRankSum=2.399;QD=19.85;ReadPosRankSum=1.440;VQSLOD=3.5619;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:8.85:0,9,56	0/0:8,0:8:24.07:0,24,281	0/0:51,0:16:9.95:0,10,163	0/0:47,1:19:31.89:0,32,202	0/0:24,0:24:66.02:0,66,722	0/0:9,0:9:23.14:0,23,267	0/0:11,0:11:27.04:0,27,291	0/0:29,0:29:77.92:0,78,775	0/0:9,0:9:26.93:0,27,260	1/1:2,28:31:86.38:922,86,0	1/1:0,23:23:53.81:536,54,0	1/1:4,0:8:16.54:131,17,0	1/1:0,1:11:8.26:73,8,0	0/0:10,0:10:30.07:0,30,336	0/0:14,0:14:41.99:0,42,432	0/0:12,0:12:36.08:0,36,403	0/0:22,0:22:62.92:0,63,653	0/0:8,0:8:16.43:0,16,86	0/0:20,0:20:53.23:0,53,532	0/0:16,0:16:39.88:0,40,474	0/0:14,0:14:35.38:0,35,403	1/1:0,3:15:35.87:312,36,0	1/1:2,0:14:26.85:216,27,0	1/1:0,0:8:23.88:184,24,0	1/1:1,14:17:31.88:350,32,0	0/0:16,0:16:45.09:0,45,431	0/0:19,0:19:43.24:0,43,537	0/0:20,0:20:51.55:0,52,587
chr10	73324409	.	T	TTTTTTTG	3811.24	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=4.273;DP=526;FS=82.358;HRun=0;HaplotypeScore=131.3861;InbreedingCoeff=0.5216;MQ=66.66;MQ0=2;MQRankSum=-6.870;QD=19.95;ReadPosRankSum=0.031;VQSLOD=-0.1908;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:18:80.21:306,0,80	0/0:9,0:9:21.02:0,21,270	0/0:27,0:8:11.56:0,12,118	0/1:18,0:12:8.84:9,0,111	0/0:22,0:22:47.86:0,48,539	0/0:21,0:21:55.61:0,56,658	0/0:17,0:17:40.87:0,41,514	0/0:28,0:28:54.59:0,55,601	0/0:21,0:21:24.50:0,24,271	0/1:25,0:25:99:463,0,219	0/1:29,0:29:99:365,0,218	1/1:4,10:18:20.98:707,21,0	1/1:2,11:16:12.04:383,12,0	0/0:7,0:7:19.58:0,20,239	0/0:24,0:24:66.08:0,66,829	0/0:21,0:21:60.08:0,60,836	0/0:14,0:14:34.78:0,35,398	0/0:4,0:4:10.17:0,10,65	0/0:22,0:22:56.88:0,57,584	0/0:34,0:34:74.67:0,75,796	0/0:22,0:22:51.05:0,51,611	1/1:3,10:15:20.68:455,21,0	1/1:3,12:17:27.05:766,27,0	1/1:4,8:15:12.43:236,12,0	0/1:18,0:17:99:121,0,188	0/0:18,0:18:38.99:0,39,386	0/0:19,0:19:49.65:0,50,481	0/0:5,0:5:11.98:0,12,101
chr10	73325021	.	GA	G	1497.50	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.519;DP=474;FS=1.639;HRun=9;HaplotypeScore=55.5908;InbreedingCoeff=0.9637;MQ=63.98;MQ0=8;MQRankSum=1.851;QD=17.41;ReadPosRankSum=1.573;VQSLOD=3.8641;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.16:0,57,648	0/0:11,0:11:30.08:0,30,336	0/0:17,0:10:13.37:0,13,146	0/0:16,0:8:5.22:0,5,131	0/0:27,0:27:72.16:0,72,807	0/0:20,0:19:54.16:0,54,623	0/0:17,0:17:51.11:0,51,574	0/0:25,0:24:63.18:0,63,719	0/0:14,0:14:39.12:0,39,450	0/0:16,0:16:45.12:0,45,509	0/0:19,0:19:45.13:0,45,510	1/1:0,15:15:33.02:302,33,0	1/1:1,14:15:33.02:302,33,0	0/0:9,0:9:24.07:0,24,277	0/0:17,0:16:48.13:0,48,544	0/0:13,0:13:30.09:0,30,346	0/0:25,0:23:63.53:0,64,688	0/0:19,0:19:24.81:0,25,455	0/0:11,0:10:27.08:0,27,311	0/0:28,0:27:81.24:0,81,932	0/0:8,0:8:21.01:0,21,227	1/1:0,14:14:30.01:273,30,0	1/1:3,18:21:38.54:356,39,0	1/1:1,20:21:48.03:439,48,0	0/0:14,0:14:33.09:0,33,375	0/0:20,0:20:54.15:0,54,612	0/0:12,0:12:36.06:0,36,391	0/0:8,0:7:21.06:0,21,242
chr10	73325032	.	G	GA	1455.19	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-1.193;DP=493;FS=9.410;HRun=6;HaplotypeScore=55.5845;InbreedingCoeff=0.9796;MQ=65.35;MQ0=4;MQRankSum=-0.248;QD=25.09;ReadPosRankSum=-0.314;VQSLOD=2.8759;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.12:0,54,549	0/0:10,0:10:27.06:0,27,275	0/0:18,0:11:11.19:0,11,189	0/0:17,0:9:18.27:0,18,209	0/0:26,0:26:75.17:0,75,764	0/0:20,0:19:54.12:0,54,551	0/0:19,0:19:51.11:0,51,520	0/0:29,0:29:72.14:0,72,724	0/0:14,0:14:39.09:0,39,398	1/1:2,17:19:51.16:642,51,0	1/1:4,19:23:48.11:579,48,0	0/0:16,0:16:36.07:0,36,361	0/0:17,0:17:42.08:0,42,422	0/0:10,0:10:24.05:0,24,244	0/0:17,0:17:51.12:0,51,520	0/0:13,0:13:33.07:0,33,336	0/0:23,0:21:51.11:0,51,517	0/0:18,0:18:48.09:0,48,488	0/0:13,0:13:29.79:0,30,281	0/0:31,0:31:89.55:0,90,888	0/0:8,0:8:21.05:0,21,214	0/0:13,0:13:36.01:0,36,339	0/0:20,0:20:50.86:0,51,509	0/0:22,0:22:54.11:0,54,543	1/1:1,15:16:30.10:377,30,0	0/0:22,0:22:54.11:0,54,546	0/0:12,0:12:30.07:0,30,306	0/0:7,0:7:21.03:0,21,207
chr10	73325670	.	AG	A	4462.04	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.316;DP=564;FS=3.931;HRun=2;HaplotypeScore=53.4284;InbreedingCoeff=0.9973;MQ=82.92;MQ0=0;MQRankSum=2.161;QD=33.80;ReadPosRankSum=3.971;VQSLOD=4.9051;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1549	0/0:10,0:10:30.10:0,30,447	0/0:26,0:25:69.05:0,69,988	0/0:20,0:20:55.35:0,55,722	0/0:26,0:26:75.25:0,75,1124	0/0:26,0:26:75.14:0,75,1051	0/0:16,0:16:48.11:0,48,674	0/0:30,0:30:90.29:0,90,1310	0/0:22,0:22:66.21:0,66,966	1/1:1,27:28:81.25:1038,81,0	1/1:0,16:16:45.10:565,45,0	1/1:0,11:11:21.07:273,21,0	1/1:0,20:20:54.18:701,54,0	0/0:21,1:22:24.22:0,24,819	0/0:20,0:20:60.20:0,60,893	0/0:17,0:17:48.13:0,48,661	0/0:27,0:27:81.25:0,81,1189	0/0:6,0:6:18.06:0,18,265	0/0:27,0:27:81.25:0,81,1186	0/0:16,0:16:48.16:0,48,718	0/0:19,0:19:54.18:0,54,809	1/1:0,13:13:36.07:448,36,0	1/1:0,11:11:27.09:351,27,0	1/1:0,18:18:42.14:541,42,0	1/1:0,15:15:42.14:545,42,0	0/0:25,1:26:39.30:0,39,1084	0/0:22,0:22:66.21:0,66,967	0/0:18,0:18:54.10:0,54,704
chr10	73326218	.	CA	C	1855.29	PASS	AB=0.759;AC=22;AF=0.393;AN=56;BaseQRankSum=10.517;DP=503;FS=2.790;HRun=12;HaplotypeScore=60.1486;InbreedingCoeff=0.5455;MQ=66.70;MQ0=3;MQRankSum=0.500;QD=7.33;ReadPosRankSum=3.771;VQSLOD=2.1941;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:19:43.37:349,43,0	0/0:4,0:4:11.86:0,12,105	0/1:20,0:16:5.75:6,0,127	0/0:9,1:10:1.34:0,1,97	0/0:20,2:22:1.62:0,2,380	0/0:18,0:18:51.09:0,51,512	0/0:16,1:18:21.67:0,22,380	0/0:25,0:25:44.91:0,45,436	0/0:16,1:17:12.82:0,13,307	1/1:9,0:30:44.80:130,45,0	1/1:3,0:16:24.43:71,24,0	1/1:2,14:16:11.38:271,11,0	0/1:7,15:22:3.98:214,0,4	0/0:17,0:18:47.89:0,48,447	0/0:27,2:29:22.59:0,23,567	0/0:12,0:12:36.06:0,36,360	0/0:17,1:20:27.69:0,28,439	1/1:2,12:15:13.34:196,13,0	0/1:9,2:12:26.34:26,0,128	0/0:25,0:25:69.02:0,69,666	0/1:16,3:19:30.64:31,0,265	1/1:1,15:17:13.27:276,13,0	0/1:1,8:10:1.50:163,0,2	1/1:3,13:16:32.87:255,33,0	1/1:2,0:16:18.33:53,18,0	0/1:16,2:22:12.25:12,0,300	0/0:22,0:24:50.94:0,51,502	0/0:8,0:8:18.04:0,18,183
chr10	73327086	.	CT	C	1185.89	PASS	AB=0.923;AC=11;AF=0.196;AN=56;BaseQRankSum=10.454;DP=494;FS=7.834;HRun=10;HaplotypeScore=65.2477;InbreedingCoeff=0.7975;MQ=72.41;MQ0=0;MQRankSum=1.148;QD=9.97;ReadPosRankSum=1.278;VQSLOD=2.1885;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:44.98:391,45,0	0/0:8,0:9:26.89:0,27,270	0/0:28,0:18:6.12:0,6,272	0/0:21,0:17:19.26:0,19,213	0/0:17,0:17:39.11:0,39,431	0/0:11,0:11:33.09:0,33,365	0/0:9,0:9:21.05:0,21,224	0/0:25,0:25:51.13:0,51,557	0/0:21,0:21:63.16:0,63,688	1/1:23,0:23:39.62:234,40,0	1/1:21,0:21:19.12:241,19,0	0/0:17,0:18:44.88:0,45,447	0/0:8,0:8:24.01:0,24,244	0/0:16,0:16:39.09:0,39,423	0/0:25,0:25:69.17:0,69,755	0/0:17,0:17:48.09:0,48,518	0/0:21,0:21:48.13:0,48,531	1/1:1,17:18:38.99:338,39,0	0/0:21,0:22:40.26:0,40,652	0/0:19,0:19:48.12:0,48,522	0/0:6,0:6:18.05:0,18,199	0/0:19,0:19:4.83:0,5,447	0/0:16,0:17:35.89:0,36,365	0/0:13,0:13:4.73:0,5,296	1/1:21,0:21:8.68:135,9,0	0/1:11,1:12:20.73:21,0,233	0/0:22,0:22:66.14:0,66,710	0/0:11,0:11:30.06:0,30,322
chr10	73327096	.	TA	T	2207.17	PASS	AB=0.958;AC=14;AF=0.250;AN=56;BaseQRankSum=10.226;DP=498;FS=21.569;HRun=1;HaplotypeScore=60.6768;InbreedingCoeff=0.4221;MQ=75.66;MQ0=0;MQRankSum=1.215;QD=11.74;ReadPosRankSum=0.278;VQSLOD=0.4454;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:8.17:8,0,69	0/0:9,0:9:27.06:0,27,340	0/0:27,0:19:33.72:0,34,440	0/1:19,0:17:17.38:17,0,240	0/0:22,0:22:66.07:0,66,757	0/0:14,0:14:42.10:0,42,534	0/0:7,0:7:21.05:0,21,273	0/0:23,0:23:63.11:0,63,791	0/0:22,0:22:66.19:0,66,886	1/1:0,23:23:68.21:849,68,0	1/1:1,20:21:57.55:752,58,0	0/1:16,0:16:9.86:10,0,43	0/0:7,0:7:13.04:0,13,43	0/0:16,0:16:45.12:0,45,591	0/0:26,0:26:78.20:0,78,1018	0/0:17,0:17:51.16:0,51,687	0/0:22,0:22:60.13:0,60,761	1/1:17,0:17:9.13:21,9,0	0/0:23,0:23:67.06:0,67,877	0/0:19,0:19:54.14:0,54,698	0/0:8,0:8:24.05:0,24,301	0/1:20,0:20:48.03:103,0,48	0/0:12,0:12:10.76:0,11,50	0/1:13,2:15:29.27:113,0,29	1/1:2,17:19:36.03:461,36,0	0/1:11,2:13:47.37:47,0,352	0/0:25,0:25:75.18:0,75,968	0/0:11,0:11:33.09:0,33,436
chr10	73327273	.	G	GA	2240.05	PASS	AB=0.917;AC=15;AF=0.268;AN=56;BaseQRankSum=2.416;DP=597;FS=0.000;HRun=10;HaplotypeScore=99.4559;InbreedingCoeff=0.8847;MQ=78.11;MQ0=9;MQRankSum=-0.840;QD=15.89;ReadPosRankSum=4.092;VQSLOD=3.8342;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,17:23:47.70:490,48,0	0/1:10,1:10:4.85:5,0,163	0/0:50,0:22:33.13:0,33,260	0/0:47,0:29:21.52:0,22,240	0/0:31,0:32:42.73:0,43,487	0/0:15,0:15:38.90:0,39,316	0/0:21,0:21:53.87:0,54,433	0/0:23,0:22:41.81:0,42,325	0/0:23,1:24:31.03:0,31,446	0/0:24,0:24:57.89:0,58,448	0/0:22,0:23:61.79:0,62,476	1/1:2,14:16:27.03:274,27,0	1/1:2,12:14:27.07:286,27,0	0/0:17,0:17:15.17:0,15,217	0/0:23,1:25:36.13:0,36,481	0/0:20,0:20:25.15:0,25,396	0/0:28,1:29:30.97:0,31,449	1/1:4,13:17:5.45:260,5,0	0/0:14,0:13:29.91:0,30,241	0/0:16,0:18:28.13:0,28,304	0/0:17,0:15:35.94:0,36,293	1/1:5,11:16:30.03:303,30,0	1/1:4,21:26:26.33:466,26,0	1/1:3,15:18:33.08:349,33,0	0/0:21,1:20:15.96:0,16,320	0/0:15,0:15:41.94:0,42,342	0/0:17,0:17:29.94:0,30,246	0/0:3,0:3:5.99:0,6,49
chr10	73328165	.	A	AAAAAC	9232.73	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=5.107;DP=468;FS=1.338;HRun=0;HaplotypeScore=86.5509;InbreedingCoeff=0.8931;MQ=62.06;MQ0=0;MQRankSum=-11.653;QD=65.95;ReadPosRankSum=1.585;VQSLOD=5.8004;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:65.81:0,66,1234	0/0:10,0:10:30.10:0,30,588	0/0:8,0:7:21.07:0,21,401	0/1:4,0:2:23.98:24,0,53	0/0:33,0:33:84.29:0,84,1634	0/0:21,0:21:45.14:0,45,847	0/0:7,0:7:18.06:0,18,350	0/0:28,0:28:63.20:0,63,1163	0/0:17,0:17:48.16:0,48,931	1/1:5,24:29:75.22:2095,75,0	1/1:3,16:20:48.13:1321,48,0	1/1:3,9:12:27.09:783,27,0	1/1:3,9:12:30.10:873,30,0	0/0:15,0:15:36.12:0,36,694	0/0:10,0:10:27.09:0,27,529	0/0:14,0:14:42.14:0,42,821	0/0:19,0:19:51.17:0,51,992	0/0:10,0:10:27.08:0,27,494	0/0:13,0:13:30.10:0,30,565	0/0:35,0:35:99:0,99,1923	0/0:9,0:9:21.07:0,21,406	1/1:2,5:7:15.05:443,15,0	1/1:2,17:19:42.14:1240,42,0	1/1:3,7:10:21.07:534,21,0	1/1:7,20:27:66.23:1920,66,0	0/0:18,0:18:45.11:0,45,800	0/0:36,0:36:99:0,102,1931	0/0:2,0:2:6.02:0,6,118
chr10	73328668	.	AAC	A	156.29	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=5.607;DP=340;FS=16.521;HRun=0;HaplotypeScore=48.2308;InbreedingCoeff=0.4775;MQ=76.84;MQ0=10;MQRankSum=-0.126;QD=2.60;ReadPosRankSum=-2.439;VQSLOD=-0.2683;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:50.07:0,50,577	0/0:1,0:1:2.97:0,3,20	0/0:46,0:15:6.04:0,6,89	0/1:23,0:12:9.13:9,0,65	0/1:12,0:12:10.28:10,0,216	0/0:15,0:14:0.71:0,1,271	0/0:13,0:13:25.18:0,25,363	0/0:15,0:15:37.85:0,38,535	0/0:9,0:9:22.84:0,23,223	1/1:1,4:5:12.04:158,12,0	1/1:3,5:8:9.35:77,9,0	0/0:11,0:11:20.83:0,21,338	0/0:15,0:15:26.05:0,26,435	0/0:7,0:7:17.70:0,18,203	0/0:9,0:9:11.01:0,11,284	0/0:9,0:9:19.74:0,20,277	0/0:10,0:10:22.15:0,22,371	0/0:9,0:9:25.85:0,26,298	0/0:17,0:17:14.92:0,15,359	0/0:6,0:6:11.89:0,12,109	1/1:3,0:3:0.47:1,0,0	0/0:7,0:7:2.98:0,3,208	0/0:8,0:8:18.52:0,19,280	0/0:17,0:17:47.75:0,48,629	1/1:9,0:9:5.81:33,6,0	0/0:10,0:10:29.95:0,30,369	0/0:17,0:16:42.96:0,43,544	0/0:8,0:8:2.30:0,2,299
chr10	73328690	.	C	CT	464.87	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=4.386;DP=224;FS=9.173;HRun=0;HaplotypeScore=47.1605;InbreedingCoeff=0.7189;MQ=78.17;MQ0=7;MQRankSum=-2.006;QD=8.77;ReadPosRankSum=-0.180;VQSLOD=2.0387;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,10:16:7.34:32,7,0	./.	0/0:22,0:9:8.97:0,9,85	0/0:19,0:11:13.86:0,14,84	0/0:11,0:11:23.79:0,24,169	0/0:19,0:19:38.82:0,39,318	0/0:8,0:8:14.91:0,15,115	0/0:5,0:5:12.01:0,12,113	0/0:6,0:6:5.99:0,6,49	0/0:2,0:2:3:0,3,27	0/0:6,0:6:6.40:0,6,50	1/1:9,0:9:18.66:142,19,0	1/1:9,0:9:26.50:190,27,0	0/0:1,0:1:2.96:0,3,19	0/0:4,0:4:6.01:0,6,63	0/0:7,0:7:14.92:0,15,124	0/0:10,0:10:20.90:0,21,173	0/0:6,0:6:14.09:0,14,89	0/0:7,0:7:14.92:0,15,120	0/0:5,0:5:8.99:0,9,74	0/0:3,0:3:3:0,3,26	1/1:1,0:1:2.04:6,2,0	1/1:4,1:5:11.92:90,12,0	1/1:12,1:13:25.05:169,25,0	0/0:8,0:8:9:0,9,78	0/0:10,0:10:18.01:0,18,163	0/0:5,0:5:11.96:0,12,100	0/0:7,0:7:15:0,15,135
chr10	73328993	.	A	AC	693.84	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.418;DP=419;FS=0.000;HRun=5;HaplotypeScore=53.8040;InbreedingCoeff=0.8817;MQ=71.70;MQ0=0;MQRankSum=0.225;QD=27.75;ReadPosRankSum=1.406;VQSLOD=3.6584;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:41.12:0,41,384	0/0:2,0:2:3.01:0,3,32	0/0:12,0:11:27.02:0,27,270	0/0:13,0:13:33.02:0,33,331	0/0:9,0:9:27.07:0,27,290	0/0:25,0:25:66.16:0,66,709	0/0:14,0:14:33.08:0,33,354	0/0:26,0:26:66.11:0,66,696	0/0:15,0:15:42.11:0,42,451	1/1:1,7:8:21.07:269,21,0	1/1:0,7:7:21.07:266,21,0	0/0:12,0:12:28.66:0,29,152	0/0:16,0:16:43.85:0,44,268	0/0:19,0:19:54.12:0,54,572	0/0:28,0:28:72.18:0,72,771	0/0:13,0:13:33.08:0,33,355	0/0:18,0:18:50.16:0,50,521	0/0:10,0:10:6.27:0,6,122	0/0:21,0:21:54.11:0,54,565	0/0:10,0:10:27.07:0,27,289	0/0:26,0:26:69.17:0,69,741	0/0:7,0:7:20.30:0,20,117	0/0:3,0:3:8.67:0,9,47	0/0:10,0:10:23.10:0,23,124	1/1:0,10:10:24.07:299,24,0	0/0:21,1:22:21.50:0,22,573	0/0:23,0:23:66.15:0,66,700	0/0:13,0:13:36.09:0,36,387
chr10	73329287	.	CA	C	813.10	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.701;DP=326;FS=7.245;HRun=2;HaplotypeScore=27.6127;InbreedingCoeff=0.8173;MQ=61.44;MQ0=0;MQRankSum=-0.153;QD=29.04;ReadPosRankSum=0.496;VQSLOD=2.5228;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:15.05:0,15,223	0/0:2,0:2:6.02:0,6,90	0/0:1,0:1:3.01:0,3,41	0/0:1,0:1:3.01:0,3,45	0/0:17,0:17:51.17:0,51,761	0/0:13,0:13:39.13:0,39,583	0/0:8,0:8:24.08:0,24,359	0/0:29,0:29:78.10:0,78,998	0/0:13,0:13:39.12:0,39,563	1/1:0,11:11:33.06:395,33,0	1/1:0,7:7:20.93:248,21,0	0/0:6,0:6:18.06:0,18,269	0/0:9,0:9:27.09:0,27,402	0/0:13,0:13:39.13:0,39,583	0/0:7,0:7:21.06:0,21,297	0/0:7,0:7:21.07:0,21,312	0/0:28,0:28:75.17:0,75,1031	0/0:21,0:21:63.17:0,63,913	0/0:17,0:17:48.14:0,48,681	0/0:22,0:22:65.80:0,66,929	0/0:5,0:5:15.05:0,15,224	0/0:5,0:5:15.05:0,15,219	0/0:7,0:7:18.06:0,18,269	0/0:3,0:3:9.03:0,9,130	1/1:1,9:10:24.08:311,24,0	0/0:20,0:20:60.20:0,60,881	0/0:21,0:21:63.17:0,63,896	0/0:18,0:18:54.15:0,54,748
chr10	73330357	.	T	TAA	1608	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.933;DP=592;FS=1.197;HRun=11;HaplotypeScore=79.2750;InbreedingCoeff=0.9912;MQ=62.05;MQ0=1;MQRankSum=1.563;QD=27.72;ReadPosRankSum=-2.488;VQSLOD=3.3809;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:27:56.42:0,56,495	0/0:10,0:10:21.01:0,21,204	0/0:14,0:10:16.16:0,16,114	0/0:14,0:13:23.96:0,24,222	0/0:27,0:30:71.52:0,72,662	0/0:15,0:16:35.73:0,36,327	0/0:15,0:15:32.98:0,33,320	0/0:27,0:28:56.72:0,57,530	0/0:10,0:11:26.77:0,27,245	1/1:2,17:20:53.62:672,54,0	1/1:6,16:25:56.66:746,57,0	0/0:16,0:17:38.75:0,39,361	0/0:25,0:25:63.02:0,63,605	0/0:26,0:26:63.04:0,63,605	0/0:26,0:26:69.05:0,69,658	0/0:21,0:22:53.78:0,54,506	0/0:27,0:32:73.78:0,74,641	0/0:1,0:13:27.43:0,27,119	0/0:17,0:20:26.63:0,27,344	0/0:32,0:32:81.06:0,81,784	0/0:14,0:14:36.04:0,36,349	0/0:21,0:21:54.02:0,54,524	0/0:19,0:21:50.50:0,50,459	0/0:14,0:14:33.02:0,33,320	1/1:2,10:13:24.08:333,24,0	0/0:24,0:26:59.50:0,59,543	0/0:36,0:38:95.58:0,96,896	0/0:19,0:19:41.88:0,42,407
chr10	73331457	.	TTCTCTCTCTCTCTCTC	T	1706.20	PASS	AC=2;AF=0.042;AN=48;BaseQRankSum=5.823;DP=558;FS=5.558;HRun=0;HaplotypeScore=226.1556;InbreedingCoeff=0.6901;MQ=56.19;MQ0=11;MQRankSum=-6.026;QD=65.62;ReadPosRankSum=0.944;VQSLOD=2.7243;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:18.04:0,18,780	0/0:10,0:10:18.06:0,18,1202	./.	./.	0/0:27,0:26:45.15:0,45,2909	0/0:27,0:26:63.19:0,63,3829	0/0:27,0:27:45.14:0,45,2270	0/0:29,0:28:60.16:0,60,2620	0/0:23,0:23:42.13:0,42,2627	1/1:12,12:25:42.14:1799,42,0	./.	0/0:17,0:16:12.04:0,12,494	0/0:34,0:36:46.08:0,46,2048	0/0:17,0:17:24.07:0,24,1369	0/0:20,0:19:39.11:0,39,2367	0/0:22,0:22:48.16:0,48,2881	0/0:14,0:15:33.10:0,33,1839	0/0:2,0:2:3.01:0,3,157	0/0:14,0:14:12.04:0,12,451	0/0:24,0:26:48.15:0,48,3035	0/0:33,0:33:58.07:0,58,3214	0/0:24,0:23:11.75:0,12,400	0/0:14,0:14:12.02:0,12,386	0/0:10,0:10:6.02:0,6,343	./.	0/0:16,0:15:42.14:0,42,2183	0/0:30,0:30:60.08:0,60,3133	0/0:8,0:8:18.06:0,18,1252
chr10	73331493	.	C	CTCTCTGTG	255.51	PASS	AB=1.000;AC=7;AF=0.140;AN=50;BaseQRankSum=2.947;DP=518;FS=2.360;HRun=0;HaplotypeScore=148.2079;InbreedingCoeff=0.5118;MQ=53.02;MQ0=14;MQRankSum=-3.509;QD=3.93;ReadPosRankSum=-3.715;VQSLOD=1.5915;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:6:18.05:0,18,301	0/0:24,0:4:3.48:0,3,35	0/0:33,0:6:11.63:0,12,79	0/0:28,0:26:63.20:0,63,1065	0/0:25,0:24:63.21:0,63,1303	0/0:19,0:19:41.34:0,41,702	0/0:27,0:26:57.21:0,57,897	0/0:15,0:15:39.13:0,39,742	0/0:25,0:24:11.95:0,12,492	0/0:14,0:14:0.41:0,0,1	./.	0/1:26,0:25:95.48:284,0,95	0/0:14,0:14:36.10:0,36,594	0/0:16,0:15:36.11:0,36,661	0/0:22,0:21:60.10:0,60,1091	0/0:13,0:13:39.08:0,39,721	1/1:3,0:2:0.47:1,0,0	0/0:9,0:8:17.91:0,18,238	0/0:28,0:27:66.21:0,66,1259	0/0:25,0:25:43.43:0,43,820	1/1:21,0:20:2.60:24,3,0	1/1:15,0:15:2.96:49,3,0	0/0:11,0:10:0.47:0,0,1	./.	0/0:21,0:20:16.73:0,17,305	0/0:26,0:26:57.12:0,57,970	0/0:10,0:10:30.10:0,30,582
chr10	73331527	.	CAGAGAGAGAGAGAGAGAGAGAG	C	390.74	PASS	AB=0.586;AC=9;AF=0.167;AN=54;BaseQRankSum=4.092;DP=551;FS=4.741;HRun=0;HaplotypeScore=234.4706;InbreedingCoeff=0.5881;MQ=56.63;MQ0=29;MQRankSum=-2.506;QD=3.37;ReadPosRankSum=-1.473;VQSLOD=1.8243;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:12:3.01:0,3,203	0/0:6,0:6:9.92:0,10,737	1/1:44,0:6:1.82:5,2,0	0/0:63,0:8:0.47:0,0,1	0/0:21,0:22:30.10:0,30,1623	0/0:25,0:22:26.34:0,26,2535	0/0:14,0:14:15.05:0,15,989	0/0:31,0:30:30.57:0,31,1207	0/0:13,0:12:9.03:0,9,655	0/0:18,0:20:27.09:0,27,1028	0/0:8,0:10:3.01:0,3,75	1/1:7,7:12:3.01:138,3,0	1/1:10,13:22:6.02:347,6,0	0/0:15,0:15:21.05:0,21,1475	0/0:13,0:13:24.08:0,24,2024	0/0:17,0:19:30.10:0,30,2422	0/0:16,0:18:33.11:0,33,2885	0/0:6,0:6:11.40:0,11,861	0/0:13,0:13:17.42:0,17,393	0/0:34,0:34:57.20:0,57,4590	0/0:18,0:18:30.10:0,30,2419	1/1:8,10:17:0.47:1,0,0	0/1:5,12:16:0:0,0,0	./.	0/0:10,0:11:6.02:0,6,256	0/0:17,0:17:30.10:0,30,2017	0/0:26,0:26:48.16:0,48,3740	0/0:13,0:13:27.09:0,27,1682
chr10	73332323	.	GAAA	G	1037.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.691;DP=440;FS=0.802;HRun=5;HaplotypeScore=60.6063;InbreedingCoeff=0.7944;MQ=67.05;MQ0=0;MQRankSum=0.021;QD=33.48;ReadPosRankSum=0.571;VQSLOD=0.9561;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:31:53.69:1133,54,0	0/0:7,0:7:21.07:0,21,484	0/0:9,0:9:18.05:0,18,350	0/0:8,0:7:21.07:0,21,429	0/0:26,0:26:78.27:0,78,1741	0/0:24,0:24:69.24:0,69,1570	0/0:14,0:14:42.14:0,42,950	0/0:28,0:27:75.24:0,75,1602	0/0:13,0:13:39.13:0,39,898	0/0:21,0:21:59.95:0,60,1383	0/0:12,0:12:33.11:0,33,747	0/0:17,0:17:48.16:0,48,1107	0/0:14,0:14:42.14:0,42,932	0/0:15,0:15:45.15:0,45,1037	0/0:21,0:21:57.19:0,57,1271	0/0:8,0:8:24.08:0,24,540	0/0:15,0:16:42.12:0,42,892	0/0:19,0:19:57.20:0,57,1291	0/0:10,0:10:30.08:0,30,591	0/0:15,0:15:45.15:0,45,1019	0/0:8,0:8:24.08:0,24,534	0/0:1,0:1:3.01:0,3,69	0/0:8,0:8:24.08:0,24,553	0/0:4,0:4:9.03:0,9,207	0/0:23,0:23:66.20:0,66,1476	0/0:16,0:16:48.16:0,48,1108	0/0:38,0:38:99:0,111,2517	0/0:14,0:14:42.14:0,42,969
chr10	73333367	.	G	GTGGTTTTTTT	3604.78	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.955;DP=721;FS=6.714;HRun=0;HaplotypeScore=230.1470;InbreedingCoeff=0.9886;MQ=64.75;MQ0=10;MQRankSum=-6.140;QD=48.71;ReadPosRankSum=-1.061;VQSLOD=2.0325;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:87.13:0,87,2220	0/0:5,0:5:12.04:0,12,386	0/0:61,0:30:42.05:0,42,736	0/0:61,0:29:36.31:0,36,524	0/0:32,0:32:92.49:0,92,2108	0/0:24,0:24:66.16:0,66,1791	0/0:15,0:15:39.04:0,39,1056	0/0:15,0:15:45.07:0,45,894	0/0:19,0:19:57.14:0,57,1484	1/1:38,3:42:99:2199,106,0	1/1:13,1:13:37.16:572,37,0	0/0:22,0:22:63.16:0,63,1426	0/0:26,0:26:69.05:0,69,1652	0/0:18,0:18:45.07:0,45,970	0/0:15,0:15:42.10:0,42,898	0/0:26,0:26:75.23:0,75,2027	0/0:36,0:36:99:0,105,2411	0/0:21,0:21:60.16:0,60,1468	0/0:26,0:24:71.77:0,72,1548	0/0:27,0:27:77.31:0,77,1950	0/0:18,0:17:31.22:0,31,958	0/0:34,0:34:91.08:0,91,1955	0/0:14,0:14:39.11:0,39,834	0/0:33,0:33:78.26:0,78,2014	1/1:17,1:18:48.11:834,48,0	0/0:22,0:22:29.05:0,29,1139	0/0:29,0:28:87.24:0,87,2306	0/0:17,0:17:47.51:0,48,1168
chr10	73333369	.	GT	G	2651.33	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.644;DP=737;FS=21.307;HRun=9;HaplotypeScore=113.2466;InbreedingCoeff=0.9918;MQ=64.51;MQ0=11;MQRankSum=2.364;QD=20.39;ReadPosRankSum=4.030;VQSLOD=2.5936;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:84.16:0,84,921	0/0:5,0:5:12.04:0,12,138	0/0:61,0:31:26.18:0,26,524	0/0:60,1:30:22.92:0,23,365	0/0:34,0:35:83.79:0,84,905	0/0:24,0:24:63.18:0,63,718	0/0:14,0:14:40.36:0,40,452	0/0:16,0:16:42.10:0,42,467	0/0:21,0:21:57.14:0,57,639	0/0:40,1:41:93.27:0,93,727	0/0:15,0:14:37.63:0,38,295	1/1:2,20:22:54.03:494,54,0	1/1:2,23:25:63.03:576,63,0	0/0:17,0:17:42.12:0,42,476	0/0:15,0:15:39.11:0,39,441	0/0:27,0:27:73.75:0,74,817	0/0:36,0:36:96.24:0,96,1083	0/0:22,0:22:54.12:0,54,599	0/0:28,0:25:65.76:0,66,709	0/0:30,0:30:87.23:0,87,977	0/0:19,0:18:36.06:0,36,400	1/1:5,28:33:81.03:740,81,0	1/1:3,14:17:33.01:302,33,0	1/1:1,32:33:78.04:714,78,0	0/0:19,0:19:41.69:0,42,315	0/0:21,0:21:50.94:0,51,567	0/0:30,0:29:90.25:0,90,1021	0/0:17,0:17:51.12:0,51,567
chr10	73333379	.	G	GT	1566.98	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=7.885;DP=715;FS=2.253;HRun=9;HaplotypeScore=114.2773;InbreedingCoeff=0.7691;MQ=63.00;MQ0=12;MQRankSum=-5.966;QD=12.34;ReadPosRankSum=-1.348;VQSLOD=2.9142;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:77.84:0,78,698	0/0:6,0:6:15.01:0,15,137	0/0:55,0:25:0.61:0,1,221	0/1:63,0:33:68.30:68,0,144	0/0:30,0:30:67.89:0,68,609	0/0:21,0:21:58.59:0,59,526	0/0:16,0:16:42:0,42,380	0/0:16,0:16:36.01:0,36,329	0/0:22,0:22:60.01:0,60,544	1/1:7,27:34:84.14:909,84,0	1/1:2,11:12:30.08:336,30,0	0/0:23,0:23:63.03:0,63,569	0/0:23,0:23:63.02:0,63,565	0/0:18,0:18:31.12:0,31,394	0/0:15,0:15:36:0,36,323	0/0:26,0:26:77.93:0,78,693	0/0:34,0:34:87.04:0,87,796	0/0:20,0:20:57.03:0,57,520	0/0:29,0:25:62.98:0,63,571	0/0:31,1:32:46.39:0,46,669	0/0:17,0:16:32.70:0,33,301	0/0:29,0:29:81.03:0,81,728	0/0:17,0:17:41.94:0,42,362	0/0:37,0:37:90:0,90,809	1/1:1,15:16:36.09:402,36,0	0/0:22,0:22:51.01:0,51,465	0/0:34,0:33:95.95:0,96,857	0/0:15,0:15:36.02:0,36,329
chr10	73333753	.	A	ACTTTTTTTTTC	24234.72	PASS	AB=0.838;AC=20;AF=0.357;AN=56;BaseQRankSum=3.315;DP=597;FS=0.343;HRun=0;HaplotypeScore=186.7613;InbreedingCoeff=0.8157;MQ=63.28;MQ0=1;MQRankSum=-17.754;QD=105.37;ReadPosRankSum=-1.311;VQSLOD=4.5158;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:39:96.33:4585,96,0	0/0:9,0:9:24.08:0,24,777	0/0:21,0:17:4.53:0,5,722	0/0:22,0:14:20.99:0,21,667	0/0:23,0:23:63.22:0,63,1988	0/0:20,0:20:48.16:0,48,1512	0/0:26,0:26:60.19:0,60,1839	0/0:35,0:35:93.31:0,93,2785	0/0:27,0:27:66.22:0,66,2050	1/1:16,6:23:66.23:3218,66,0	1/1:8,11:22:57.15:2814,57,0	1/1:11,4:15:42.14:2164,42,0	1/1:8,4:12:33.11:1575,33,0	0/0:22,0:22:60.19:0,60,1847	0/0:18,0:18:48.11:0,48,1369	0/0:13,0:13:36.10:0,36,1087	0/0:38,0:38:99:0,102,3266	1/1:11,0:17:30.10:1292,30,0	0/0:22,0:22:45.14:0,45,1329	0/0:21,0:21:54.17:0,54,1627	0/0:20,0:20:54.15:0,54,1551	1/1:14,9:26:60.21:2874,60,0	0/1:13,12:25:42.89:2556,0,43	1/1:13,7:20:42.14:1921,42,0	1/1:5,5:10:24.08:1186,24,0	0/1:21,0:21:51.11:51,0,1784	0/0:25,0:25:66.22:0,66,2069	0/0:5,0:4:9.03:0,9,291
chr10	73335402	.	G	GC	2706.39	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-8.949;DP=592;FS=0.951;HRun=6;HaplotypeScore=59.7356;InbreedingCoeff=0.9955;MQ=87.30;MQ0=0;MQRankSum=-1.377;QD=27.90;ReadPosRankSum=3.257;VQSLOD=4.3004;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:90.20:0,90,918	0/0:7,0:7:15.03:0,15,153	0/0:18,0:18:51.09:0,51,511	0/0:22,0:22:51.06:0,51,502	0/0:16,0:16:39.08:0,39,398	0/0:24,0:24:66.13:0,66,666	0/0:24,0:24:66.13:0,66,665	0/0:27,0:27:66.14:0,66,673	0/0:14,0:14:33.05:0,33,330	0/0:18,0:18:42.07:0,42,422	0/0:11,0:11:30.07:0,30,306	1/1:2,16:18:42.13:527,42,0	1/1:0,12:12:33.11:415,33,0	0/0:23,0:23:60.13:0,60,612	0/0:19,0:19:51.08:0,51,511	0/0:20,0:20:57.12:0,57,574	0/0:44,0:44:99:0,126,1277	0/0:27,0:27:75.17:0,75,765	0/0:21,0:21:51.10:0,51,513	0/0:19,0:19:54.12:0,54,550	0/0:48,0:48:99:0,132,1346	1/1:4,18:23:54:656,54,0	1/1:2,13:15:36.12:453,36,0	1/1:6,23:29:66.21:830,66,0	0/0:17,0:17:48.10:0,48,483	0/0:16,0:16:45.10:0,45,458	0/0:16,0:16:48.11:0,48,489	0/0:9,0:9:24.05:0,24,243
chr10	73335929	.	TA	T	2166.74	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.780;DP=662;FS=0.000;HRun=8;HaplotypeScore=75.8716;InbreedingCoeff=0.9837;MQ=75.59;MQ0=0;MQRankSum=2.033;QD=23.30;ReadPosRankSum=1.152;VQSLOD=4.2263;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:15:38.81:0,39,406	0/0:6,0:6:18.06:0,18,217	0/0:28,1:27:37.72:0,38,500	0/0:19,0:14:20.07:0,20,235	0/0:31,0:31:84.24:0,84,999	0/0:24,0:24:69.20:0,69,823	0/0:11,0:11:33.09:0,33,388	0/0:26,0:26:60.16:0,60,695	0/0:17,0:17:45.14:0,45,543	1/1:1,32:33:93.11:890,93,0	1/1:2,26:28:66.10:637,66,0	0/0:21,0:21:63.17:0,63,741	0/0:32,0:32:87.27:0,87,1051	0/0:15,0:15:42.13:0,42,507	0/0:12,0:12:36.11:0,36,435	0/0:28,0:28:75.22:0,75,895	0/0:16,0:16:45.14:0,45,538	0/0:21,0:21:63.19:0,63,761	0/0:20,0:20:57.17:0,57,688	0/0:38,0:38:99:0,111,1340	0/0:10,0:10:30.09:0,30,362	0/0:38,0:38:99:0,102,1206	0/0:49,0:49:99:0,144,1717	0/0:17,0:17:48.15:0,48,580	1/1:3,29:32:81.12:782,81,0	0/0:33,2:35:52.08:0,52,1113	0/0:29,0:29:81.25:0,81,978	0/0:10,0:10:11.88:0,12,262
chr10	73336367	.	C	CA	2790.07	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-9.211;DP=448;FS=12.172;HRun=1;HaplotypeScore=41.4560;InbreedingCoeff=0.9918;MQ=68.87;MQ0=0;MQRankSum=0.526;QD=39.30;ReadPosRankSum=0.651;VQSLOD=2.7752;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:36.12:0,36,467	0/0:9,0:9:27.09:0,27,351	0/0:8,0:8:24.07:0,24,301	0/0:7,0:6:15.03:0,15,179	0/0:25,0:25:75.24:0,75,973	0/0:22,0:22:66.21:0,66,857	0/0:9,0:9:27.09:0,27,351	0/0:27,0:27:78.25:0,78,1013	0/0:9,0:9:24.08:0,24,312	0/0:12,0:12:33.10:0,33,418	0/0:21,0:21:60.19:0,60,779	1/1:0,8:8:24.08:360,24,0	1/1:0,21:21:57.19:852,57,0	0/0:8,0:8:24.08:0,24,312	0/0:11,0:11:33.11:0,33,428	0/0:9,0:9:27.09:0,27,351	0/0:24,0:24:66.21:0,66,857	0/0:19,0:19:57.18:0,57,737	0/0:21,0:21:60.19:0,60,767	0/0:33,0:33:99:0,99,1271	0/0:8,0:8:24.08:0,24,311	1/1:0,7:7:21.07:315,21,0	1/1:0,26:26:68.93:1034,69,0	1/1:0,9:9:27.09:405,27,0	0/0:23,0:23:66.18:0,66,827	0/0:21,0:21:60.66:0,61,767	0/0:28,0:28:84.27:0,84,1090	0/0:10,0:10:30.10:0,30,390
chr10	73336531	.	TAC	T	2874.38	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.532;DP=547;FS=5.030;HRun=0;HaplotypeScore=74.8420;InbreedingCoeff=0.9712;MQ=92.24;MQ0=0;MQRankSum=-2.919;QD=32.30;ReadPosRankSum=3.765;VQSLOD=5.6290;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:48.11:0,48,789	0/0:10,0:10:30.10:0,30,532	0/0:24,0:24:48.65:0,49,946	0/0:27,0:26:75.18:0,75,1206	0/0:31,0:31:84.29:0,84,1490	0/0:24,0:24:72.25:0,72,1277	0/0:11,0:11:33.11:0,33,586	0/0:28,0:28:75.25:0,75,1301	0/0:13,0:13:36.12:0,36,633	0/0:17,0:17:36.12:0,36,636	0/0:13,0:13:39.12:0,39,664	1/1:1,14:15:39.13:536,39,0	1/1:1,23:24:66.22:907,66,0	0/0:21,0:21:63.22:0,63,1117	0/0:19,0:19:57.20:0,57,1011	0/0:23,0:23:63.22:0,63,1108	0/0:23,0:23:60.20:0,60,1048	0/0:6,0:6:15.05:0,15,266	0/0:18,0:18:48.16:0,48,823	0/0:22,0:22:63.20:0,63,1084	0/0:23,0:23:66.23:0,66,1165	1/1:2,9:11:21.07:288,21,0	1/1:0,17:17:45.15:618,45,0	1/1:1,21:22:51.17:701,51,0	0/0:23,0:23:66.23:0,66,1170	0/0:28,0:28:81.27:0,81,1411	0/0:31,0:31:93.32:0,93,1649	0/0:3,0:3:6.02:0,6,106
chr10	73336629	.	A	AT	2247.99	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=1.618;DP=583;FS=0.469;HRun=8;HaplotypeScore=60.6021;InbreedingCoeff=0.9885;MQ=77.41;MQ0=0;MQRankSum=0.776;QD=26.76;ReadPosRankSum=2.402;VQSLOD=4.3533;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:77.98:0,78,713	0/0:5,0:5:15.01:0,15,137	0/0:19,0:17:36.48:0,36,330	0/0:17,0:16:34.17:0,34,339	0/0:18,0:18:45.02:0,45,412	0/0:25,0:25:75.01:0,75,677	0/0:14,0:14:42.02:0,42,384	0/0:27,0:27:62.97:0,63,561	0/0:20,0:20:57.03:0,57,520	0/0:17,0:16:48.02:0,48,439	0/0:25,0:25:63.01:0,63,573	1/1:1,19:20:54.16:623,54,0	1/1:3,14:17:45.13:519,45,0	0/0:15,0:15:42.01:0,42,380	0/0:30,0:30:80.99:0,81,726	0/0:22,0:22:60.03:0,60,549	0/0:25,0:24:66.03:0,66,604	0/0:11,0:11:24:0,24,220	0/0:32,0:32:78:0,78,710	0/0:22,0:22:60.03:0,60,549	0/0:34,0:34:99:0,102,925	1/1:1,15:16:33.10:381,33,0	1/1:2,12:14:36.11:415,36,0	1/1:2,15:17:42.12:485,42,0	0/0:25,0:25:69.04:0,69,631	0/0:36,0:36:92.78:0,93,847	0/0:25,0:25:69.02:0,69,631	0/0:4,0:4:12.01:0,12,110
chr10	73337705	.	AG	A	3706.64	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.481;DP=655;FS=4.207;HRun=2;HaplotypeScore=60.4951;InbreedingCoeff=0.9960;MQ=85.09;MQ0=0;MQRankSum=-0.494;QD=35.30;ReadPosRankSum=1.339;VQSLOD=4.2236;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.29:0,96,1394	0/0:9,0:9:27.09:0,27,405	0/0:20,0:20:60.11:0,60,827	0/0:22,0:22:59.43:0,59,880	0/0:27,0:27:81.26:0,81,1192	0/0:15,0:15:45.15:0,45,674	0/0:29,0:29:87.28:0,87,1282	0/0:32,0:32:93.28:0,93,1322	0/0:27,0:27:81.27:0,81,1214	0/0:40,0:40:99:0,117,1754	0/0:19,0:19:57.18:0,57,834	1/1:2,17:19:54.17:699,54,0	1/1:0,23:23:66.21:857,66,0	0/0:19,0:19:57.15:0,57,795	0/0:23,0:23:69.22:0,69,1012	0/0:23,0:23:69.23:0,69,1034	0/0:31,0:31:93.30:0,93,1370	0/0:10,0:10:30.10:0,30,449	0/0:29,0:29:87.27:0,87,1248	0/0:21,0:21:60.20:0,60,898	0/0:33,0:33:99:0,99,1463	1/1:0,16:16:41.92:482,42,0	1/1:0,26:26:75.24:974,75,0	1/1:1,20:21:15.23:695,15,0	0/0:29,0:28:87.25:0,87,1278	0/0:21,0:21:60.20:0,60,899	0/0:28,0:28:84.28:0,84,1259	0/0:11,0:11:33.09:0,33,473
chr10	73337989	.	CT	C	4368.85	PASS	AB=0.916;AC=20;AF=0.357;AN=56;BaseQRankSum=13.712;DP=506;FS=7.019;HRun=9;HaplotypeScore=60.0178;InbreedingCoeff=0.8782;MQ=75.62;MQ0=0;MQRankSum=-1.278;QD=21.21;ReadPosRankSum=1.957;VQSLOD=5.7279;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:74.99:678,75,0	0/0:6,0:6:15.04:0,15,173	0/0:14,0:11:20.26:0,20,179	0/1:11,1:10:16.46:16,0,52	0/0:28,1:29:50.77:0,51,838	0/0:13,0:14:38.95:0,39,430	0/0:13,0:13:30.09:0,30,346	0/0:30,0:30:69.20:0,69,789	0/0:11,0:11:30.09:0,30,346	1/1:4,15:19:45:407,45,0	1/1:3,16:19:48.01:438,48,0	1/1:2,18:20:54.03:494,54,0	1/1:0,11:11:33.02:302,33,0	0/0:18,0:18:45.10:0,45,506	0/0:19,0:19:57.16:0,57,649	0/0:13,0:13:36.11:0,36,415	0/0:21,0:20:57.12:0,57,641	0/1:9,1:10:0.44:0,0,233	0/0:27,0:27:75.19:0,75,839	0/0:23,0:23:60.18:0,60,692	0/0:8,0:8:24.07:0,24,277	1/1:1,12:13:35.97:321,36,0	1/1:2,20:22:60.03:549,60,0	1/1:1,14:15:39.01:357,39,0	1/1:5,31:36:89.89:805,90,0	0/0:24,0:24:63.18:0,63,719	0/0:14,0:14:42.12:0,42,483	0/0:16,0:16:45.13:0,45,519
chr10	73339003	.	C	CCAG	1322.57	PASS	AB=0.571;AC=11;AF=0.229;AN=48;BaseQRankSum=6.469;DP=418;FS=3.857;HRun=0;HaplotypeScore=77.9792;InbreedingCoeff=0.8786;MQ=73.82;MQ0=0;MQRankSum=-6.619;QD=29.39;ReadPosRankSum=-0.119;VQSLOD=3.6304;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:9,0:9:27.09:0,27,461	0/0:17,0:17:27.25:0,27,574	0/0:24,0:24:60.20:0,60,963	0/0:19,0:19:57.20:0,57,972	0/0:22,0:22:63.19:0,63,1024	0/0:18,0:18:51.17:0,51,864	0/0:33,0:33:87.30:0,87,1474	0/0:14,0:14:42.14:0,42,716	1/1:2,10:11:33.11:629,33,0	1/1:0,9:9:9.03:192,9,0	1/1:1,3:4:3.01:61,3,0	./.	0/0:13,0:13:33.11:0,33,562	0/0:19,0:19:51.17:0,51,869	0/0:17,0:17:48.16:0,48,819	0/0:26,0:26:75.24:0,75,1253	1/1:2,0:2:6.02:91,6,0	0/0:13,0:13:33.11:0,33,563	0/0:21,0:21:60.19:0,60,989	0/0:32,0:32:93.32:0,93,1586	./.	0/1:1,3:4:0:0,0,0	./.	1/1:1,13:14:29.13:499,29,0	0/0:21,0:21:60.19:0,60,997	0/0:23,0:23:69.24:0,69,1177	0/0:12,0:12:30.10:0,30,512
chr10	73339014	.	T	TATATATATACAC	5355.93	PASS	AB=1.000;AC=11;AF=0.220;AN=50;BaseQRankSum=8.056;DP=432;FS=7.545;HRun=0;HaplotypeScore=158.7477;InbreedingCoeff=0.8180;MQ=70.77;MQ0=2;MQRankSum=-8.060;QD=83.69;ReadPosRankSum=-0.057;VQSLOD=4.4064;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:11.97:0,12,96	0/0:12,0:12:33.11:0,33,1148	0/0:19,0:17:35.11:0,35,1475	0/0:21,0:20:59.97:0,60,1719	0/0:20,0:20:60.21:0,60,2296	0/0:23,0:23:69.24:0,69,2551	0/0:18,0:18:54.16:0,54,1818	0/0:29,0:29:81.27:0,81,2866	0/0:18,0:18:54.19:0,54,1776	1/1:14,3:18:54.08:2620,54,0	1/1:9,2:11:7.84:431,8,0	1/1:2,0:3:9.03:252,9,0	1/1:6,0:6:5.81:75,6,0	0/0:10,0:10:27.08:0,27,843	0/0:18,0:18:51.18:0,51,1836	0/0:18,0:18:54.19:0,54,2029	0/0:27,0:27:78.24:0,78,2830	0/1:9,0:9:24.35:131,0,24	0/0:13,0:13:39.12:0,39,1322	0/0:19,0:19:57.18:0,57,2059	0/0:30,0:30:90.31:0,90,3259	./.	./.	./.	1/1:6,8:16:30.78:1846,31,0	0/0:25,0:25:69.21:0,69,2202	0/0:26,0:26:78.20:0,78,2456	0/0:10,0:10:30.10:0,30,1188
chr10	73339212	.	GA	G	710.51	PASS	AB=0.864;AC=20;AF=0.357;AN=56;BaseQRankSum=5.281;DP=436;FS=1.810;HRun=14;HaplotypeScore=48.2502;InbreedingCoeff=0.5465;MQ=59.21;MQ0=18;MQRankSum=1.113;QD=4.53;ReadPosRankSum=1.057;VQSLOD=0.8357;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:30:28.35:0,28,370	0/0:7,0:7:21:0,21,187	0/0:25,1:5:8.52:0,9,46	0/1:28,0:11:7.68:8,0,26	0/0:21,0:21:43.94:0,44,384	0/0:14,0:16:32.50:0,32,266	0/0:15,0:16:30.62:0,31,236	0/0:25,1:26:35.92:0,36,434	0/1:8,2:9:4.16:4,0,85	1/1:3,11:13:29.68:203,30,0	1/1:11,3:13:20.07:116,20,0	1/1:1,7:8:11.88:82,12,0	1/1:1,3:4:2.98:21,3,0	0/0:9,0:11:15.30:0,15,119	0/0:16,0:16:38.24:0,38,324	0/0:10,0:12:22.08:0,22,178	0/0:31,0:31:83.77:0,84,736	1/1:8,16:24:7.79:173,8,0	0/0:10,1:9:4.15:0,4,113	0/1:16,1:17:0.86:1,0,151	0/0:6,0:6:14.85:0,15,125	1/1:2,0:2:2.97:21,3,0	1/1:1,2:3:5.95:41,6,0	1/1:6,8:14:1.12:97,1,0	0/1:9,8:17:9.94:119,0,10	0/0:19,2:21:3.29:0,3,308	0/0:12,0:14:34.05:0,34,283	0/0:10,1:10:3.44:0,3,166
chr10	73342289	.	A	AT	1040.69	PASS	AB=0.962;AC=8;AF=0.174;AN=46;BaseQRankSum=-6.142;DP=364;FS=17.415;HRun=10;HaplotypeScore=49.5158;InbreedingCoeff=0.7082;MQ=77.54;MQ0=0;MQRankSum=-0.303;QD=12.54;ReadPosRankSum=1.566;VQSLOD=1.4730;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:13:31.99:0,32,252	0/0:5,0:5:11.99:0,12,99	0/1:12,0:12:1.91:2,0,100	0/1:11,0:10:13.02:13,0,40	0/0:20,0:21:46.96:0,47,375	0/0:17,0:17:50.93:0,51,418	0/0:7,0:7:20.97:0,21,172	0/0:30,0:32:69.97:0,70,552	0/0:18,0:19:40.93:0,41,323	1/1:7,8:16:26.90:270,27,0	1/1:4,19:24:7.06:508,7,0	./.	./.	0/0:11,0:11:32.96:0,33,271	0/0:11,0:11:29.93:0,30,242	0/0:16,0:16:38.95:0,39,320	0/0:22,0:22:41.88:0,42,339	0/0:14,0:14:32.94:0,33,271	0/0:16,0:16:29.96:0,30,246	0/0:17,0:17:41.94:0,42,345	0/0:5,0:5:14.98:0,15,123	./.	./.	./.	1/1:4,14:18:36.09:384,36,0	0/0:22,0:22:47.91:0,48,394	0/0:21,0:21:59.93:0,60,493	0/0:12,0:12:26.97:0,27,222
chr10	73343069	.	C	CA	2735.37	PASS	AC=6;AF=0.130;AN=46;BaseQRankSum=-7.031;DP=642;FS=0.472;HRun=1;HaplotypeScore=79.6085;InbreedingCoeff=0.9210;MQ=73.77;MQ0=0;MQRankSum=-1.597;QD=36.47;ReadPosRankSum=1.077;VQSLOD=4.0169;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:67.18:0,67,1286	0/0:10,0:10:24.05:0,24,295	0/0:33,0:33:93.27:0,93,1190	0/0:33,0:35:76.66:0,77,909	0/0:27,0:27:81.26:0,81,1050	0/0:27,0:27:81.26:0,81,1051	0/0:22,0:22:60.17:0,60,763	0/0:32,0:32:93.28:0,93,1171	0/0:29,0:29:87.28:0,87,1129	1/1:0,24:24:72.24:1078,72,0	1/1:1,22:23:63.14:895,63,0	./.	./.	0/0:22,0:22:66.20:0,66,841	0/0:29,0:29:84.25:0,84,1062	0/0:30,0:30:87.27:0,87,1116	0/0:28,0:28:84.24:0,84,1059	0/0:14,0:14:1.17:0,1,429	0/0:27,0:26:78.23:0,78,997	0/0:36,0:36:93.30:0,93,1206	0/0:44,0:44:99:0,126,1621	./.	./.	./.	1/1:2,26:28:60.20:899,60,0	0/0:35,0:35:99:0,105,1351	0/0:35,0:35:99:0,105,1347	0/0:16,0:16:39.10:0,39,488
chr10	73343424	.	AG	A	6448.20	PASS	AB=0.819;AC=44;AF=0.957;AN=46;BaseQRankSum=-4.807;DP=293;FS=22.171;HRun=5;HaplotypeScore=87.2704;InbreedingCoeff=-0.0476;MQ=63.02;MQ0=0;MQRankSum=-2.973;QD=22.01;ReadPosRankSum=2.095;VQSLOD=3.3593;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:38.99:411,39,0	1/1:1,2:3:6.02:68,6,0	0/1:14,3:9:2.85:116,0,3	0/1:18,7:22:99:150,0,112	1/1:0,12:12:15:156,15,0	1/1:1,7:8:20.98:210,21,0	1/1:4,13:18:42.99:468,43,0	1/1:7,10:17:39.11:436,39,0	1/1:0,13:13:36.10:408,36,0	1/1:4,9:13:30.08:334,30,0	1/1:0,5:5:12.03:136,12,0	./.	./.	1/1:3,4:7:15.03:160,15,0	1/1:2,10:12:30.09:340,30,0	1/1:2,9:11:30.09:340,30,0	1/1:4,15:19:41.88:461,42,0	1/1:1,5:6:15.04:170,15,0	1/1:2,8:10:24.05:261,24,0	1/1:2,12:14:30.08:340,30,0	1/1:8,22:30:32.99:328,33,0	./.	./.	./.	1/1:1,10:11:27.07:306,27,0	1/1:1,13:14:39.11:442,39,0	1/1:0,8:8:24.07:272,24,0	1/1:0,4:4:12.03:135,12,0
chr10	73343565	.	CT	C	241.07	PASS	AB=0.892;AC=15;AF=0.288;AN=52;BaseQRankSum=3.778;DP=122;FS=3.011;HRun=1;HaplotypeScore=29.0020;InbreedingCoeff=0.3693;MQ=80.33;MQ0=0;MQRankSum=-2.840;QD=5.88;ReadPosRankSum=0.101;VQSLOD=0.4465;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:12.04:0,12,93	0/0:2,1:3:2.98:0,3,22	0/1:6,1:6:15.86:16,0,57	0/1:11,0:12:0.45:0,0,143	0/0:3,0:3:8.98:0,9,72	./.	0/0:7,0:7:8.23:0,8,82	0/0:2,0:2:0.47:0,0,1	0/0:3,0:3:5.90:0,6,41	0/1:3,1:4:12.53:13,0,13	1/1:1,0:1:0.47:1,0,0	1/1:0,1:1:3.01:42,3,0	1/1:3,2:5:14.95:151,15,0	0/0:1,0:1:3:0,3,25	0/0:2,0:2:6.01:0,6,60	0/0:5,0:5:11.27:0,11,80	0/0:5,0:5:8.68:0,9,71	0/0:2,0:2:5.96:0,6,45	0/0:8,0:8:12.91:0,13,132	0/0:8,0:8:14.21:0,14,108	0/0:14,0:14:20.23:0,20,149	1/1:2,1:3:6.01:68,6,0	1/1:3,3:6:6.02:83,6,0	./.	0/0:1,0:1:2.50:0,2,9	0/0:4,0:4:6:0,6,55	1/1:2,0:2:0.47:1,0,0	0/0:1,0:1:2.97:0,3,20
chr10	73343603	.	T	TA	1185.32	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.766;DP=271;FS=0.917;HRun=0;HaplotypeScore=41.0622;InbreedingCoeff=0.8844;MQ=62.87;MQ0=1;MQRankSum=0.035;QD=32.93;ReadPosRankSum=1.041;VQSLOD=3.2571;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.16:0,48,669	0/0:4,0:4:12.04:0,12,168	0/0:19,0:16:48.14:0,48,623	0/0:26,0:21:63.16:0,63,833	0/0:10,0:10:27.06:0,27,378	0/0:4,0:4:12.04:0,12,168	0/0:13,0:13:39.13:0,39,545	0/0:10,0:10:30.08:0,30,402	0/0:7,0:7:21.07:0,21,294	0/0:5,0:5:12.04:0,12,168	0/0:2,0:2:6.02:0,6,84	1/1:0,4:4:12.01:145,12,0	1/1:0,7:7:21.07:290,21,0	0/0:5,0:5:12.04:0,12,168	0/0:6,0:6:18.06:0,18,252	0/0:13,0:13:39.13:0,39,545	0/0:10,0:10:30.10:0,30,419	0/0:9,0:9:27.09:0,27,377	0/0:15,0:15:42.14:0,42,587	0/0:12,0:12:36.09:0,36,469	0/0:25,0:25:63.19:0,63,861	1/1:0,10:10:24.08:334,24,0	1/1:0,10:10:30.10:420,30,0	1/1:1,4:5:12.04:166,12,0	0/0:4,0:4:12.04:0,12,168	0/0:12,0:12:36.10:0,36,473	0/0:7,0:7:18.06:0,18,252	0/0:1,0:1:3.01:0,3,42
chr10	73344305	.	T	TA	2513.08	PASS	AB=0.927;AC=20;AF=0.357;AN=56;BaseQRankSum=-8.803;DP=478;FS=8.513;HRun=8;HaplotypeScore=46.6246;InbreedingCoeff=0.8404;MQ=68.79;MQ0=1;MQRankSum=0.090;QD=17.33;ReadPosRankSum=1.748;VQSLOD=2.8810;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,103,1080	0/0:11,0:11:27.01:0,27,247	0/0:14,0:12:23.75:0,24,203	0/1:13,0:9:2.73:3,0,79	0/0:24,0:24:60.03:0,60,549	0/0:19,1:20:25.42:0,25,487	0/0:13,0:13:36.01:0,36,325	0/0:32,0:32:84.03:0,84,763	0/0:7,0:7:15.01:0,15,137	1/1:6,10:16:30.09:346,30,0	1/1:2,12:14:27.08:312,27,0	1/1:1,4:5:12.04:138,12,0	1/1:1,7:8:21.06:242,21,0	0/0:21,0:21:54.02:0,54,493	0/0:15,0:15:45.02:0,45,412	0/0:13,0:13:24.93:0,25,267	0/0:32,0:32:87.05:0,87,796	1/1:1,16:17:39.12:450,39,0	0/0:27,0:27:66.02:0,66,599	0/0:15,0:15:35.99:0,36,324	0/0:15,0:15:33.02:0,33,302	1/1:0,3:3:6.02:69,6,0	1/1:2,8:10:24.07:277,24,0	1/1:2,4:6:12.04:138,12,0	1/1:5,24:29:63.19:727,63,0	0/1:21,2:23:18.21:18,0,360	0/0:15,0:15:32.99:0,33,296	0/0:9,0:9:21.01:0,21,192
chr10	73344967	.	ATCCC	A	185.29	PASS	AB=0.829;AC=10;AF=0.217;AN=46;BaseQRankSum=1.567;DP=356;FS=0.000;HRun=0;HaplotypeScore=50.8210;InbreedingCoeff=0.0658;MQ=50.28;MQ0=35;MQRankSum=-0.402;QD=1.78;ReadPosRankSum=1.567;VQSLOD=1.2796;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,5:14:99:102,0,437	0/0:5,0:3:9.03:0,9,186	0/0:61,0:13:32.38:0,32,447	0/0:94,0:25:40.03:0,40,562	0/1:9,0:3:0:0,0,0	0/0:10,0:2:6.02:0,6,107	./.	0/0:5,0:1:3.01:0,3,50	0/0:7,0:1:2.97:0,3,20	0/0:9,0:7:12.04:0,12,219	0/0:2,0:1:3.01:0,3,63	0/1:3,0:3:23.91:24,0,116	0/0:3,0:1:3.01:0,3,59	./.	./.	0/0:2,0:1:3.01:0,3,45	0/1:13,2:11:25.68:26,0,201	1/1:4,8:5:11.98:109,12,0	1/1:4,1:2:2.90:18,3,0	0/0:3,0:1:3.01:0,3,55	./.	./.	0/0:4,0:2:6.02:0,6,100	0/1:9,9:10:24.35:24,0,353	0/0:6,0:5:12.04:0,12,248	0/0:11,0:4:9.03:0,9,169	0/0:6,0:4:6.02:0,6,126	0/1:8,0:5:4.79:5,0,67
chr10	73345804	.	AGGCCCC	A	843.99	PASS	AB=0.905;AC=23;AF=0.676;AN=34;BaseQRankSum=-1.482;DP=199;FS=15.444;HRun=0;HaplotypeScore=31.8864;InbreedingCoeff=0.2246;MQ=59.54;MQ0=50;MQRankSum=-1.929;QD=15.07;ReadPosRankSum=0.586;VQSLOD=0.5942;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,1:2:3.01:31,3,0	0/0:61,0:7:20.77:0,21,257	0/0:59,0:10:18.35:0,18,247	1/1:3,7:10:20.56:434,21,0	1/1:2,1:3:3.48:71,3,0	1/1:1,4:4:6.01:69,6,0	0/1:5,0:5:23.46:117,0,23	./.	./.	./.	./.	./.	0/1:3,0:3:14.89:57,0,15	1/1:1,0:1:2.84:14,3,0	1/1:1,0:1:3.01:49,3,0	1/1:1,7:8:1.55:4,2,0	./.	0/1:3,0:3:7.57:8,0,69	./.	1/1:2,0:2:2.94:18,3,0	./.	./.	./.	0/0:2,0:1:3.01:0,3,35	1/1:6,0:3:3.63:30,4,0	1/1:4,1:3:0.19:63,0,0	0/0:9,0:3:5.37:0,5,33
chr10	73347673	.	C	CA	707.82	PASS	AB=0.955;AC=23;AF=0.411;AN=56;BaseQRankSum=8.791;DP=428;FS=3.340;HRun=11;HaplotypeScore=61.6483;InbreedingCoeff=0.4800;MQ=63.98;MQ0=5;MQRankSum=2.281;QD=3.31;ReadPosRankSum=-2.537;VQSLOD=-0.6658;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:17.92:0,18,145	0/0:4,0:4:8.96:0,9,70	0/0:28,0:15:22.63:0,23,166	0/1:32,1:9:14.22:22,0,14	0/0:25,1:26:25.38:0,25,369	0/0:18,0:19:41.80:0,42,325	0/1:13,1:14:0.61:1,0,173	0/1:19,2:22:7.71:8,0,215	0/1:13,1:15:3.96:4,0,140	1/1:27,0:27:53.56:270,54,0	1/1:27,0:27:41.91:309,42,0	1/1:10,0:10:5.36:33,5,0	1/1:7,0:7:2.49:7,2,0	0/0:12,0:12:20.03:0,20,200	0/1:9,0:9:9.39:9,0,118	0/0:12,0:12:29.88:0,30,232	0/0:17,1:19:16.21:0,16,286	1/1:7,0:7:3.31:16,3,0	0/0:22,1:22:20.33:0,20,341	0/0:24,0:24:32.55:0,33,432	0/0:9,0:9:23.90:0,24,186	1/1:3,0:3:0.47:1,0,0	0/1:6,0:6:1.57:2,0,2	1/1:9,0:7:9.14:63,9,0	1/1:12,0:12:15.40:133,15,0	0/1:10,1:12:4.51:5,0,142	0/0:22,0:22:53.76:0,54,417	0/0:6,0:6:14.94:0,15,116
chr10	73347681	.	A	AC	1920.78	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.372;DP=460;FS=0.000;HRun=0;HaplotypeScore=62.8681;InbreedingCoeff=0.9215;MQ=70.25;MQ0=4;MQRankSum=0.293;QD=25.61;ReadPosRankSum=1.409;VQSLOD=4.6286;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:26.99:0,27,299	0/0:3,0:3:9.03:0,9,125	0/0:28,0:17:15.80:0,16,367	0/0:33,0:14:13.62:0,14,139	0/0:28,0:28:72.91:0,73,908	0/0:18,0:18:51.13:0,51,664	0/0:14,0:14:37.52:0,38,475	0/0:24,0:23:52.42:0,52,631	0/0:16,0:16:39.87:0,40,456	1/1:2,24:28:71.23:783,71,0	1/1:14,15:30:87.67:926,88,0	0/0:14,0:14:33.76:0,34,232	0/0:12,0:12:26.47:0,26,195	0/0:13,0:13:39.02:0,39,474	0/0:12,0:12:19.25:0,19,312	0/0:10,0:10:30.10:0,30,418	0/0:20,0:20:48.19:0,48,639	0/0:9,0:9:11.72:0,12,80	0/0:25,0:24:64.74:0,65,802	0/0:23,0:23:64.25:0,64,885	0/0:9,0:9:27.08:0,27,361	0/0:5,0:5:8.96:0,9,71	0/0:6,0:6:17.56:0,18,133	0/0:10,0:8:13.86:0,14,98	1/1:1,15:17:29.68:354,30,0	0/0:15,0:15:31.43:0,31,383	0/0:21,0:21:63.18:0,63,828	0/0:6,0:6:18.05:0,18,236
chr10	73349584	.	C	CAAACT	14702.09	PASS	AB=0.962;AC=21;AF=0.375;AN=56;BaseQRankSum=-11.373;DP=557;FS=5.948;HRun=0;HaplotypeScore=93.1512;InbreedingCoeff=0.9204;MQ=75.70;MQ0=0;MQRankSum=-7.825;QD=66.23;ReadPosRankSum=3.896;VQSLOD=6.1011;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:26:63.17:1954,63,0	0/0:5,0:5:15.05:0,15,334	0/0:15,0:15:42.11:0,42,792	0/0:19,0:19:51.16:0,51,1066	0/0:27,0:27:75.26:0,75,1672	0/0:20,0:20:54.17:0,54,1161	0/0:16,0:16:45.14:0,45,942	0/0:40,0:40:99:0,117,2259	0/0:18,0:18:51.14:0,51,1012	1/1:1,17:20:60.16:1773,60,0	1/1:3,22:29:72.12:2091,72,0	1/1:2,13:19:42.14:1296,42,0	1/1:3,19:24:62.95:1946,63,0	0/0:25,0:25:75.20:0,75,1464	0/0:22,0:22:63.19:0,63,1320	0/0:11,0:11:30.10:0,30,669	0/0:25,0:25:69.22:0,69,1494	1/1:0,6:8:18.06:580,18,0	0/0:17,0:17:48.15:0,48,969	0/0:21,0:21:63.16:0,63,1253	0/0:23,0:23:69.21:0,69,1436	1/1:4,6:11:24:613,24,0	1/1:3,15:22:48.04:1309,48,0	1/1:1,15:16:48.12:1474,48,0	1/1:0,19:22:51.18:1645,51,0	0/1:24,1:25:21.72:22,0,1502	0/0:20,0:20:57.17:0,57,1187	0/0:11,0:11:33.11:0,33,735
chr10	73350679	.	CCTCTGCCTCTCTGCCT	C	2381.18	PASS	AB=0.942;AC=14;AF=0.250;AN=56;BaseQRankSum=4.259;DP=642;FS=1.541;HRun=0;HaplotypeScore=224.3473;InbreedingCoeff=0.4021;MQ=49.67;MQ0=41;MQRankSum=-6.488;QD=13.53;ReadPosRankSum=0.412;VQSLOD=2.6935;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:21.07:0,21,942	0/0:6,0:6:18.06:0,18,549	0/0:50,0:16:23.91:0,24,469	0/0:54,0:18:29.46:0,29,579	0/0:21,0:20:42.14:0,42,1833	0/0:31,0:29:54.16:0,54,2487	0/0:26,0:25:48.16:0,48,2251	0/0:29,0:24:39.13:0,39,1214	0/0:20,0:20:45.15:0,45,2354	0/1:21,0:19:99:303,0,106	0/1:19,1:16:3.17:81,0,3	1/1:15,2:16:9.08:601,9,0	1/1:18,0:18:7.31:389,7,0	0/0:18,0:18:36.12:0,36,1671	0/0:26,0:25:51.17:0,51,3112	0/0:19,0:19:39.13:0,39,2205	0/0:28,0:27:61.76:0,62,3019	0/1:11,2:12:29.96:475,0,30	0/0:31,0:15:20.88:0,21,607	0/0:14,0:14:18.06:0,18,796	0/0:48,0:44:93.77:0,94,4890	0/1:11,0:9:35.98:36,0,41	1/1:9,1:10:3.01:45,3,0	1/1:22,2:22:10.23:241,10,0	0/1:12,3:12:6.70:340,0,7	0/1:27,0:27:35.75:36,0,1907	0/0:11,0:11:33.11:0,33,1626	0/0:11,0:11:27.09:0,27,1302
chr10	73350685	.	CCT	C	449.26	PASS	AB=0.829;AC=8;AF=0.143;AN=56;BaseQRankSum=7.689;DP=621;FS=0.793;HRun=0;HaplotypeScore=97.0033;InbreedingCoeff=-0.1596;MQ=48.48;MQ0=43;MQRankSum=-6.596;QD=3.98;ReadPosRankSum=-0.396;VQSLOD=2.5881;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:35.28:0,35,585	0/0:7,0:7:18.06:0,18,324	0/0:54,0:17:40.99:0,41,592	0/0:59,0:16:40:0,40,490	0/0:19,0:19:48.16:0,48,864	0/0:29,0:27:60.21:0,60,1067	0/0:23,0:22:60.20:0,60,1053	0/0:27,0:23:63.21:0,63,1111	0/0:22,0:22:51.65:0,52,901	0/1:18,1:17:2.93:3,0,433	0/1:15,3:14:34.57:35,0,183	0/1:10,4:13:98.27:210,0,98	0/1:14,3:17:66.07:66,0,260	0/0:20,0:20:51.17:0,51,917	0/0:26,0:25:72.25:0,72,1285	0/0:17,0:17:48.15:0,48,835	0/0:27,0:26:71.98:0,72,1242	0/1:8,3:10:70.60:163,0,71	0/0:31,0:14:25.88:0,26,536	0/0:13,0:13:24.01:0,24,396	0/0:45,1:42:99:0,102,1790	0/1:5,4:7:35.92:36,0,48	0/1:8,2:10:23.72:24,0,213	0/0:17,6:21:15.61:0,16,391	0/1:13,2:12:44.71:45,0,160	0/0:25,0:25:66.17:0,66,1119	0/0:11,0:11:33.11:0,33,594	0/0:11,0:11:33.11:0,33,594
chr10	73350697	.	T	TC	650.48	PASS	AB=0.868;AC=9;AF=0.161;AN=56;BaseQRankSum=4.125;DP=612;FS=3.659;HRun=1;HaplotypeScore=100.5631;InbreedingCoeff=-0.1921;MQ=53.26;MQ0=33;MQRankSum=-5.642;QD=4.97;ReadPosRankSum=-1.895;VQSLOD=-0.2296;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:28.36:0,28,386	0/0:7,0:7:18.06:0,18,234	0/0:60,0:20:48.63:0,49,555	0/0:62,0:17:38.41:0,38,409	0/0:21,0:21:57.19:0,57,740	0/0:20,0:20:51.62:0,52,649	0/0:22,0:21:54.18:0,54,701	0/0:22,0:20:54.17:0,54,700	0/0:21,0:21:57.19:0,57,739	0/1:16,3:17:99:220,0,102	0/1:12,3:10:26.33:81,0,26	0/1:16,1:15:47.09:47,0,199	0/1:9,6:15:99:150,0,126	0/0:17,0:17:45.15:0,45,583	0/0:24,0:23:66.21:0,66,856	0/0:14,0:14:42.14:0,42,545	0/0:30,0:29:81.26:0,81,1043	0/1:11,2:12:73.59:74,0,124	0/0:33,0:19:42.10:0,42,510	0/0:12,0:12:24.08:0,24,312	0/0:53,0:50:99:0,126,1602	0/1:8,1:7:35.94:36,0,68	0/1:6,1:7:32.88:39,0,33	0/1:18,3:19:36.27:101,0,36	0/1:14,1:14:44.65:45,0,72	0/0:21,1:22:15.37:0,15,667	0/0:13,0:13:39.13:0,39,505	0/0:9,0:9:27.09:0,27,351
chr10	73350755	.	C	CCCTCTGCG	1193.88	PASS	AB=0.886;AC=14;AF=0.250;AN=56;BaseQRankSum=5.843;DP=523;FS=1.442;HRun=0;HaplotypeScore=131.1588;InbreedingCoeff=0.5194;MQ=54.42;MQ0=17;MQRankSum=-3.770;QD=7.37;ReadPosRankSum=-0.851;VQSLOD=1.7895;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:33.26:0,33,246	0/0:4,0:5:11.99:0,12,146	0/0:19,0:5:5.14:0,5,24	0/0:31,0:8:3.05:0,3,17	0/0:13,0:13:33.07:0,33,607	0/0:16,0:14:27.04:0,27,386	0/0:30,0:29:75.09:0,75,1287	0/0:21,0:20:42.05:0,42,503	0/0:14,0:14:36.05:0,36,668	0/1:14,0:11:17.03:94,0,17	0/0:4,0:4:6:0,6,54	0/1:9,14:24:45.53:95,0,46	1/1:10,0:11:25.52:319,26,0	0/0:12,0:11:24.02:0,24,406	0/0:16,0:16:33.08:0,33,667	0/0:17,0:17:45.08:0,45,760	0/0:28,0:27:75.12:0,75,1543	0/1:14,0:13:99:160,0,126	0/0:21,0:15:32.95:0,33,485	0/0:6,0:6:15.04:0,15,292	0/0:64,0:63:99:0,166,3194	1/1:14,3:17:35.49:402,35,0	1/1:13,1:14:17.31:164,17,0	1/1:6,23:32:11.22:59,11,0	1/1:13,0:11:5.25:41,5,0	0/1:19,0:18:35.78:36,0,608	0/0:14,0:14:38.99:0,39,614	0/0:5,0:5:15:0,15,217
chr10	73350802	.	TCTCTGC	T	150.02	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=4.484;DP=690;FS=1.299;HRun=0;HaplotypeScore=133.0914;InbreedingCoeff=0.3013;MQ=65.40;MQ0=50;MQRankSum=-1.069;QD=1.06;ReadPosRankSum=-1.976;VQSLOD=1.6776;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:36.12:0,36,1188	0/0:6,0:6:9.03:0,9,287	0/0:90,0:24:9.03:0,9,144	0/1:111,0:38:52.35:52,0,119	0/0:13,0:13:27.09:0,27,794	0/0:16,0:16:24.05:0,24,608	0/0:37,0:37:75.23:0,75,2168	0/0:19,0:17:12.04:0,12,301	0/0:20,0:20:42.04:0,42,1113	0/0:21,0:18:30.56:0,31,534	0/0:7,0:7:8.59:0,9,219	0/0:15,0:15:12.46:0,12,262	0/0:14,0:13:30.10:0,30,807	0/0:12,0:12:36.12:0,36,1168	0/0:14,0:14:33.11:0,33,1064	0/0:12,0:12:24.08:0,24,781	0/0:26,0:25:48.16:0,48,1495	1/1:6,15:20:10.37:134,10,0	0/0:31,0:18:33.11:0,33,906	0/0:14,0:14:25.33:0,25,687	0/0:65,0:62:99:0,115,3239	0/0:12,0:11:19.31:0,19,472	0/0:11,0:10:6.02:0,6,130	0/0:30,0:30:30.10:0,30,952	0/1:8,0:7:59.77:72,0,60	0/0:17,0:15:18.06:0,18,549	0/0:19,0:18:36.12:0,36,1126	0/0:9,0:10:1.50:0,1,306
chr10	73350808	.	C	CCT	971.21	PASS	AB=0.833;AC=6;AF=0.107;AN=56;BaseQRankSum=4.186;DP=701;FS=12.889;HRun=0;HaplotypeScore=98.3159;InbreedingCoeff=0.5738;MQ=60.37;MQ0=52;MQRankSum=1.041;QD=16.46;ReadPosRankSum=-0.070;VQSLOD=2.8792;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:45.15:0,45,630	0/0:8,0:8:12.04:0,12,168	0/0:82,0:21:14.33:0,14,201	0/0:108,0:37:18.22:0,18,418	0/0:12,0:12:33.11:0,33,462	0/0:17,0:17:39.06:0,39,497	0/0:39,0:39:89.90:0,90,1242	0/0:20,0:16:36.12:0,36,504	0/0:21,0:21:57.10:0,57,772	0/1:10,10:17:38.33:537,0,38	1/1:2,6:9:15.05:270,15,0	0/0:16,0:15:23.98:0,24,297	0/0:15,0:14:33.11:0,33,462	0/0:17,0:17:51.15:0,51,694	0/0:13,0:13:39.12:0,39,529	0/0:13,0:13:36.12:0,36,504	0/0:25,0:24:66.21:0,66,906	0/1:20,0:19:41.76:80,0,42	0/0:29,0:16:42.09:0,42,534	0/0:16,0:15:34.03:0,34,465	0/0:68,0:65:99:0,159,2157	0/0:10,0:9:18.53:0,19,253	0/0:12,0:11:8.99:0,9,126	0/0:33,0:33:35.95:0,36,482	1/1:4,5:8:12.04:214,12,0	0/0:18,0:15:30.08:0,30,391	0/0:19,0:18:45.15:0,45,630	0/0:10,0:10:23.41:0,23,237
chr10	73352540	.	A	AT	3175.68	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=3.328;DP=513;FS=7.367;HRun=10;HaplotypeScore=63.1102;InbreedingCoeff=0.9450;MQ=69.51;MQ0=0;MQRankSum=-0.887;QD=18.15;ReadPosRankSum=-0.796;VQSLOD=3.9294;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:76.68:0,77,615	0/0:5,0:5:8.97:0,9,74	0/0:6,0:5:2.81:0,3,22	0/0:12,0:13:11.88:0,12,100	0/0:34,0:34:89.65:0,90,733	0/0:23,0:23:65.90:0,66,538	0/0:14,0:14:32.84:0,33,262	0/0:27,0:27:65.89:0,66,538	0/0:16,0:16:41.95:0,42,345	1/1:22,0:22:27.98:205,28,0	1/1:25,0:25:61.85:306,62,0	1/1:1,23:24:66.17:704,66,0	1/1:4,9:13:8.43:290,8,0	0/0:11,0:11:23.95:0,24,194	0/0:16,0:16:35.93:0,36,296	0/0:22,0:22:59.90:0,60,490	0/0:18,0:18:38.90:0,39,316	1/1:2,13:15:33.08:352,33,0	0/0:14,0:15:37.89:0,38,293	0/0:23,0:23:62.92:0,63,517	0/0:13,0:13:35.94:0,36,292	1/1:2,13:15:39.10:416,39,0	1/1:2,15:18:46.66:454,47,0	1/1:3,12:15:33.08:352,33,0	1/1:28,0:28:53.96:309,54,0	0/0:12,0:13:32:0,32,252	0/0:31,0:32:82.92:0,83,670	0/0:6,0:6:14.97:0,15,123
chr10	73352550	.	T	TA	2951.25	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=3.791;DP=515;FS=3.720;HRun=2;HaplotypeScore=60.4366;InbreedingCoeff=0.7117;MQ=74.65;MQ0=0;MQRankSum=1.807;QD=16.77;ReadPosRankSum=2.826;VQSLOD=3.9315;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:83.67:0,84,963	0/0:4,0:4:12.03:0,12,137	0/0:8,0:8:11.82:0,12,122	0/0:12,0:12:29.60:0,30,228	0/0:35,0:35:99:0,99,1177	0/0:23,0:23:69.20:0,69,838	0/0:12,0:12:33.09:0,33,394	0/0:29,0:29:78.20:0,78,902	0/0:16,0:16:48.13:0,48,568	1/1:1,20:22:64.03:783,64,0	1/1:2,24:26:69.18:902,69,0	1/1:22,0:22:47.82:158,48,0	0/1:14,0:14:32.13:32,0,60	0/0:8,0:8:24.08:0,24,296	0/0:15,0:15:45.10:0,45,520	0/0:23,0:23:66.17:0,66,778	0/0:16,0:16:42.09:0,42,499	0/1:13,0:13:8.64:71,0,9	0/0:17,0:17:45.03:0,45,505	0/0:25,0:25:72.20:0,72,857	0/0:16,0:16:45.06:0,45,501	1/1:14,0:14:7.78:58,8,0	0/1:22,0:22:59.67:60,0,107	1/1:12,0:12:23.96:75,24,0	1/1:2,29:31:75.25:1003,75,0	0/0:13,0:13:33.02:0,33,386	0/0:30,0:30:90.16:0,90,1061	0/0:6,0:6:15.05:0,15,185
chr10	73353311	.	G	GAAAC	5263.63	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-11.145;DP=612;FS=1.527;HRun=0;HaplotypeScore=97.6166;InbreedingCoeff=0.8844;MQ=75.97;MQ0=1;MQRankSum=-4.351;QD=44.61;ReadPosRankSum=2.060;VQSLOD=5.2345;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:33.11:0,33,570	0/0:12,0:12:36.11:0,36,595	0/0:21,0:21:21.07:0,21,344	0/0:17,0:17:27.63:0,28,469	0/0:37,0:37:96.33:0,96,1650	0/0:30,0:30:78.13:0,78,1301	0/0:19,0:19:42.14:0,42,708	0/0:35,0:35:81.20:0,81,1197	0/0:18,0:18:33.10:0,33,543	0/0:29,0:29:68.89:0,69,1063	0/0:31,0:31:72.20:0,72,1136	1/1:1,21:21:57.20:1440,57,0	1/1:1,14:14:33.11:833,33,0	0/0:16,0:16:48.15:0,48,793	0/0:25,0:25:63.19:0,63,1020	0/0:20,0:20:57.19:0,57,950	0/0:26,0:26:69.20:0,69,1151	0/1:17,0:17:22.30:22,0,370	0/0:16,0:16:30.04:0,30,432	0/0:31,0:31:81.25:0,81,1369	0/0:22,0:22:60.21:0,60,1028	1/1:3,17:20:42.14:1061,42,0	1/1:5,18:23:48.16:1130,48,0	1/1:4,17:20:33.04:776,33,0	0/0:19,0:19:51.17:0,51,848	0/0:14,0:14:30.09:0,30,493	0/0:33,0:33:78.27:0,78,1337	0/0:6,0:6:18.06:0,18,311
chr10	73353453	.	GTTTT	G	6814.26	PASS	AB=0.913;AC=19;AF=0.339;AN=56;BaseQRankSum=14.656;DP=517;FS=27.646;HRun=8;HaplotypeScore=88.4626;InbreedingCoeff=0.9066;MQ=75.95;MQ0=0;MQRankSum=-4.415;QD=38.28;ReadPosRankSum=2.166;VQSLOD=1.7393;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:33.11:0,33,877	0/0:6,0:6:18.06:0,18,469	0/0:11,0:11:27.09:0,27,632	0/0:13,0:13:20.97:0,21,649	0/0:29,0:29:78.27:0,78,2048	0/0:23,0:23:66.23:0,66,1738	0/0:11,0:11:30.10:0,30,772	0/0:29,0:29:81.27:0,81,2084	0/0:22,0:22:66.23:0,66,1698	1/1:0,26:26:75.20:1239,75,0	1/1:1,12:13:33.10:480,33,0	1/1:0,22:21:63.22:1086,63,0	1/1:1,22:23:57.19:988,57,0	0/0:16,0:16:45.14:0,45,1145	0/0:19,0:19:54.19:0,54,1438	0/0:19,0:19:51.18:0,51,1361	0/0:18,0:18:54.19:0,54,1432	1/1:2,7:9:15.05:260,15,0	0/0:28,0:28:72.22:0,72,1708	0/0:19,0:19:54.19:0,54,1387	0/0:18,0:18:54.19:0,54,1407	1/1:1,21:22:60.20:1017,60,0	1/1:0,19:19:54.18:874,54,0	1/1:1,6:7:9.03:156,9,0	1/1:0,16:16:42.14:676,42,0	0/1:19,2:21:38.75:39,0,1458	0/0:34,0:34:93.32:0,93,2479	0/0:12,0:12:36.12:0,36,934
chr10	73353862	.	GT	G	255.10	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.760;DP=666;FS=0.000;HRun=2;HaplotypeScore=62.7780;InbreedingCoeff=0.9832;MQ=82.86;MQ0=0;MQRankSum=-2.726;QD=25.51;ReadPosRankSum=0.217;VQSLOD=3.2500;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.13:0,42,609	0/0:5,0:5:15.05:0,15,225	0/0:19,0:19:57.18:0,57,830	0/0:18,0:18:51.17:0,51,745	0/0:28,0:28:84.28:0,84,1259	0/0:22,0:22:63.21:0,63,942	0/0:19,0:19:57.19:0,57,854	0/0:35,0:35:99:0,99,1482	0/0:25,0:25:75.25:0,75,1122	0/0:24,0:24:69.22:0,69,1021	0/0:21,0:21:60.18:0,60,877	0/0:30,0:30:90.29:0,90,1328	0/0:29,0:29:87.29:0,87,1303	0/0:21,0:21:63.19:0,63,921	0/0:32,0:32:96.33:0,96,1438	0/0:24,0:24:72.24:0,72,1079	0/0:19,0:19:57.19:0,57,851	1/1:1,9:10:26.06:349,26,0	0/0:15,0:15:45.15:0,45,674	0/0:30,0:30:90.28:0,90,1310	0/0:23,0:23:66.22:0,66,989	0/0:37,0:37:99:0,105,1573	0/0:31,0:31:84.27:0,84,1234	0/0:20,0:20:60.15:0,60,846	0/0:21,0:21:63.21:0,63,944	0/0:25,0:25:72.24:0,72,1079	0/0:42,0:42:99:0,126,1887	0/0:26,0:26:78.26:0,78,1165
chr10	73354817	.	GA	G	537.24	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=4.990;DP=389;FS=11.530;HRun=9;HaplotypeScore=37.5359;InbreedingCoeff=0.7432;MQ=58.81;MQ0=19;MQRankSum=1.263;QD=15.80;ReadPosRankSum=2.502;VQSLOD=2.1871;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,29:33:69.04:632,69,0	0/0:7,0:7:18.05:0,18,208	0/0:4,0:2:3.89:0,4,37	0/0:6,0:4:11.65:0,12,81	0/0:13,0:12:30.07:0,30,335	0/0:21,0:21:57.17:0,57,658	0/0:10,0:10:27.08:0,27,309	0/0:27,0:26:66.18:0,66,743	0/0:6,0:6:12.04:0,12,138	0/0:14,0:13:39.11:0,39,443	0/0:15,0:14:33.10:0,33,381	0/0:6,0:5:15.02:0,15,154	0/0:9,0:7:18.03:0,18,190	0/0:6,0:6:15.04:0,15,173	0/0:8,0:7:18.05:0,18,208	0/0:12,0:12:33.08:0,33,369	0/0:24,0:23:62.91:0,63,693	0/0:19,0:17:39.02:0,39,421	0/0:22,0:20:54.15:0,54,614	0/0:12,0:12:30.07:0,30,336	0/0:10,0:10:27.08:0,27,312	./.	0/0:9,0:6:9.03:0,9,104	0/0:15,0:14:33.09:0,33,371	0/0:26,0:25:66.16:0,66,738	0/0:17,0:17:51.14:0,51,578	0/0:26,0:23:54.11:0,54,591	0/0:11,0:11:21.04:0,21,230
chr10	73355151	.	T	TCAAAA	5104.39	PASS	AB=0.957;AC=19;AF=0.339;AN=56;BaseQRankSum=2.098;DP=530;FS=11.828;HRun=0;HaplotypeScore=122.4764;InbreedingCoeff=0.8508;MQ=59.76;MQ0=3;MQRankSum=-6.045;QD=26.18;ReadPosRankSum=-2.096;VQSLOD=3.6892;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:27:27.58:0,28,377	0/0:7,0:7:18.06:0,18,321	0/0:30,0:18:2.98:0,3,21	0/0:39,0:26:20.99:0,21,267	0/0:19,0:19:36.12:0,36,646	0/0:20,0:20:39.12:0,39,677	0/0:12,0:12:18.03:0,18,265	0/0:26,0:26:17.34:0,17,318	0/0:18,0:18:27.06:0,27,449	1/1:13,8:22:33.10:847,33,0	1/1:6,8:15:21.07:581,21,0	1/1:20,0:20:36.12:764,36,0	1/1:25,0:25:18.06:351,18,0	0/0:14,0:14:33.10:0,33,568	0/0:12,0:12:18.06:0,18,326	0/0:20,0:20:51.16:0,51,889	0/0:29,0:29:39.12:0,39,676	1/1:16,0:16:15.03:312,15,0	0/0:15,0:15:21.07:0,21,380	0/0:7,0:7:12.04:0,12,217	0/0:11,0:11:21.07:0,21,380	1/1:18,0:18:30.10:614,30,0	1/1:14,0:14:15.03:259,15,0	1/1:23,0:23:24.54:436,25,0	1/1:7,12:20:33.11:901,33,0	0/1:21,1:22:39.27:39,0,716	0/0:26,0:26:51.14:0,51,861	0/0:2,0:2:3.01:0,3,54
chr10	73355346	.	A	ATT	1875.97	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-1.545;DP=184;FS=4.083;HRun=4;HaplotypeScore=22.8970;InbreedingCoeff=0.8138;MQ=78.36;MQ0=1;MQRankSum=-1.510;QD=39.08;ReadPosRankSum=0.287;VQSLOD=2.2295;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:12.02:0,12,143	0/0:3,0:3:6.02:0,6,80	0/0:8,0:8:17.88:0,18,200	0/0:7,0:5:14.89:0,15,157	0/0:10,0:10:27.09:0,27,359	0/0:1,0:1:3.01:0,3,40	0/0:1,0:1:3.01:0,3,40	0/0:25,0:25:69.19:0,69,867	0/0:4,0:4:9.03:0,9,120	1/1:0,6:6:18.05:290,18,0	1/1:0,6:6:18.06:324,18,0	1/1:1,3:4:9.03:161,9,0	1/1:2,3:6:18.03:289,18,0	0/0:6,0:6:18.06:0,18,240	0/0:6,0:6:15.05:0,15,200	0/0:5,0:5:15.05:0,15,200	0/0:6,0:6:18.06:0,18,240	1/1:5,5:10:24.04:370,24,0	0/0:10,0:10:30.06:0,30,380	0/0:11,0:11:24.08:0,24,320	0/0:3,0:3:9.03:0,9,119	1/1:0,1:1:3.01:54,3,0	1/1:0,4:4:12.04:216,12,0	1/1:1,1:2:3.01:54,3,0	1/1:4,5:9:21.01:313,21,0	0/0:4,0:4:9.03:0,9,120	0/0:11,0:11:21.05:0,21,264	0/0:10,0:9:30.10:0,30,400
chr10	73355397	.	A	AAT	544.10	PASS	AC=6;AF=0.120;AN=50;BaseQRankSum=0.194;DP=183;FS=0.000;HRun=0;HaplotypeScore=27.3655;InbreedingCoeff=0.5360;MQ=79.41;MQ0=5;MQRankSum=-1.653;QD=30.23;ReadPosRankSum=1.942;VQSLOD=3.9946;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:9.03:0,9,112	0/0:3,0:3:6.02:0,6,74	0/0:12,0:4:0:0,0,0	0/0:36,0:14:11:0,11,69	0/0:3,0:3:3.01:0,3,37	0/0:2,0:2:3.01:0,3,37	0/0:2,0:2:6.02:0,6,73	0/0:35,0:34:75.20:0,75,882	0/0:4,0:4:6.02:0,6,73	1/1:1,0:3:9:97,9,0	./.	0/0:1,0:5:8.52:0,9,42	0/0:0,0:3:8.52:0,9,42	0/0:4,0:4:6.02:0,6,74	0/0:2,0:2:3.01:0,3,37	0/0:3,0:3:9.02:0,9,99	0/0:12,0:12:27.06:0,27,319	1/1:1,10:11:30.10:491,30,0	0/0:5,0:5:15.05:0,15,185	0/0:3,0:3:9.03:0,9,111	./.	0/0:2,0:2:2.04:0,2,6	0/0:0,0:5:3:0,3,9	./.	1/1:1,0:4:9:79,9,0	0/0:7,0:7:21.07:0,21,260	0/0:5,0:5:12.04:0,12,149	0/0:6,0:6:11.96:0,12,102
chr10	73356959	.	A	AGT	9374.42	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-11.977;DP=595;FS=12.982;HRun=0;HaplotypeScore=70.0979;InbreedingCoeff=0.9902;MQ=81.44;MQ0=0;MQRankSum=0.495;QD=52.67;ReadPosRankSum=5.442;VQSLOD=4.5989;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.28:0,96,1422	0/0:8,0:8:21.07:0,21,322	0/0:21,0:21:46.36:0,46,626	0/0:15,0:14:30.05:0,30,394	0/0:24,0:24:72.24:0,72,1103	0/0:21,0:21:63.21:0,63,963	0/0:30,0:30:90.27:0,90,1324	0/0:33,0:33:96.32:0,96,1450	0/0:21,0:21:63.21:0,63,965	1/1:2,21:23:66.23:1272,66,0	1/1:1,12:14:39.13:731,39,0	1/1:0,16:16:45.15:868,45,0	1/1:0,19:19:51.17:959,51,0	0/0:12,0:12:36.11:0,36,530	0/0:17,0:17:48.16:0,48,732	0/0:16,0:16:45.15:0,45,689	0/0:26,0:26:78.26:0,78,1193	1/1:3,13:17:36.12:690,36,0	0/0:20,0:20:57.17:0,57,831	0/0:24,0:24:72.24:0,72,1095	0/0:31,0:31:90.29:0,90,1355	1/1:1,13:14:42.14:804,42,0	1/1:0,29:30:90.31:1732,90,0	1/1:0,25:25:69.24:1333,69,0	1/1:0,20:20:51.17:985,51,0	0/0:26,0:26:72.24:0,72,1102	0/0:33,0:33:96.33:0,96,1467	0/0:3,0:3:9.03:0,9,138
chr10	73357118	.	T	TACACACACAC	365.65	PASS	AB=0.919;AC=10;AF=0.200;AN=50;BaseQRankSum=1.720;DP=525;FS=1.384;HRun=0;HaplotypeScore=160.9669;InbreedingCoeff=0.5318;MQ=55.15;MQ0=12;MQRankSum=-0.841;QD=2.58;ReadPosRankSum=0.667;VQSLOD=2.8199;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:32:12.15:93,12,0	0/0:6,0:6:6.02:0,6,178	./.	./.	0/0:20,0:19:30.10:0,30,867	0/0:25,0:25:23.94:0,24,684	0/0:16,0:16:27.09:0,27,659	0/0:22,0:21:15.05:0,15,330	0/0:20,0:20:5.46:0,5,454	0/0:15,0:15:30.09:0,30,738	0/0:15,0:14:15.03:0,15,361	0/0:13,7:18:2.21:0,2,7	1/1:19,0:18:6.02:291,6,0	0/0:17,0:17:33.11:0,33,858	0/0:19,0:19:27.08:0,27,695	0/0:18,0:18:27.01:0,27,750	0/0:24,0:24:30.57:0,31,853	0/1:10,0:10:1.82:2,0,93	0/0:12,0:12:12.02:0,12,306	0/0:19,0:19:30.06:0,30,781	0/0:23,0:21:39.05:0,39,1110	0/1:9,4:13:0:0,0,0	1/1:20,0:19:3.01:71,3,0	0/1:14,1:14:0:0,0,0	./.	0/1:29,0:29:30.98:31,0,1151	0/0:27,0:26:36.12:0,36,1014	0/0:8,0:7:15.05:0,15,423
chr10	73357142	.	C	CACACACACAC	348.61	PASS	AB=1.000;AC=9;AF=0.188;AN=48;BaseQRankSum=2.237;DP=532;FS=4.871;HRun=0;HaplotypeScore=145.5324;InbreedingCoeff=0.5078;MQ=47.60;MQ0=24;MQRankSum=-1.784;QD=2.95;ReadPosRankSum=-0.820;VQSLOD=2.5240;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:31:12.62:93,13,0	0/0:7,0:6:6.02:0,6,178	./.	./.	0/0:25,0:24:30.10:0,30,867	0/0:25,0:25:24.97:0,25,687	0/0:17,0:16:27.09:0,27,659	0/0:22,0:21:15.05:0,15,330	0/1:17,0:17:9.08:9,0,446	0/0:13,0:13:30.09:0,30,738	0/0:20,0:19:15.03:0,15,361	0/0:21,0:18:2:0,2,7	1/1:14,4:18:6.49:292,6,0	0/0:16,0:16:33.11:0,33,858	0/0:19,0:19:27.08:0,27,695	0/0:21,0:21:27.09:0,27,750	0/0:28,0:27:0.15:0,0,849	0/1:10,0:9:4.84:5,0,63	0/0:13,0:13:12.02:0,12,306	0/0:18,0:18:30.06:0,30,781	0/0:33,0:30:39.13:0,39,1110	./.	1/1:18,0:17:3.01:71,3,0	0/1:19,0:16:0:0,0,0	./.	0/0:40,0:39:46.56:0,47,1200	0/0:28,0:25:36.11:0,36,1014	0/0:11,0:9:15.05:0,15,423
chr10	73357154	.	CGA	C	1327.76	PASS	AB=0.905;AC=34;AF=0.680;AN=50;BaseQRankSum=-0.918;DP=510;FS=1.925;HRun=0;HaplotypeScore=81.2327;InbreedingCoeff=0.1343;MQ=46.15;MQ0=24;MQRankSum=1.007;QD=3.29;ReadPosRankSum=1.761;VQSLOD=1.3666;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:31:8.86:9,0,88	1/1:6,0:6:8.69:60,9,0	./.	./.	1/1:23,0:23:6.48:65,6,0	1/1:19,7:26:6.73:49,7,0	1/1:14,0:13:8.96:80,9,0	0/0:23,0:22:0.47:0,0,1	1/1:14,0:18:4.34:55,4,0	1/1:13,0:14:5.77:31,6,0	1/1:12,0:16:11.56:75,12,0	0/0:19,0:16:8.75:0,9,69	0/0:17,0:16:3.47:0,3,26	1/1:18,0:18:4.87:44,5,0	1/1:16,4:20:2.68:32,3,0	0/1:18,1:19:25.98:112,0,26	1/1:17,7:23:5.23:65,5,0	1/1:7,0:8:5.19:63,5,0	0/1:15,0:16:5.39:60,0,5	1/1:13,0:17:2.84:14,3,0	0/1:24,9:30:33.27:54,0,33	0/0:12,0:11:3.01:0,3,44	0/0:14,0:16:2.74:0,3,12	./.	1/1:16,0:15:18.03:181,18,0	0/1:40,0:42:0.62:314,0,1	0/1:22,0:21:68.83:69,0,133	1/1:6,3:7:3.01:33,3,0
chr10	73357755	.	AACACACACAC	A	93.19	PASS	AC=10;AF=0.208;AN=48;BaseQRankSum=3.269;DP=399;FS=11.292;HRun=0;HaplotypeScore=104.4600;InbreedingCoeff=0.4751;MQ=57.13;MQ0=12;MQRankSum=-2.099;QD=1.90;ReadPosRankSum=-0.383;VQSLOD=0.7564;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:22.87:0,23,290	0/0:7,0:7:3.01:0,3,148	./.	./.	0/0:19,0:19:12.04:0,12,483	0/0:18,0:18:21.07:0,21,934	0/0:16,0:16:2.23:0,2,112	0/0:18,0:17:0.47:0,0,1	0/0:15,0:15:12.04:0,12,484	0/0:7,0:7:2.98:0,3,22	1/1:9,0:9:3:25,3,0	./.	./.	0/0:9,0:9:3.01:0,3,98	0/0:11,0:13:15.03:0,15,452	0/0:11,0:11:9.03:0,9,325	0/0:23,0:21:17.99:0,18,815	1/1:6,0:4:2.97:20,3,0	0/0:11,0:11:9.03:0,9,429	0/0:9,0:8:9.03:0,9,298	0/0:24,0:23:12.04:0,12,563	1/1:5,3:7:3.01:75,3,0	1/1:4,3:7:2.97:20,3,0	1/1:13,5:18:3.01:73,3,0	0/0:5,0:7:2.92:0,3,17	0/0:13,0:12:12.03:0,12,420	0/0:15,0:13:12.04:0,12,532	0/0:5,0:5:3.01:0,3,132
chr10	73358039	.	ATT	A	753.76	PASS	AB=0.944;AC=8;AF=0.143;AN=56;BaseQRankSum=3.591;DP=315;FS=0.691;HRun=13;HaplotypeScore=54.2673;InbreedingCoeff=0.6402;MQ=73.51;MQ0=0;MQRankSum=0.393;QD=11.78;ReadPosRankSum=2.803;VQSLOD=1.8763;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:33.11:0,33,478	0/1:7,1:8:8.10:8,0,194	0/0:14,0:13:12.07:0,12,87	0/1:16,0:12:12.22:12,0,183	0/0:15,0:16:41.61:0,42,555	0/0:12,0:13:38.60:0,39,493	0/0:6,0:6:18.04:0,18,225	0/0:24,0:25:54.08:0,54,672	0/0:9,0:9:21.05:0,21,270	1/1:4,11:16:35.77:332,36,0	1/1:2,14:16:35.37:348,35,0	0/0:16,0:16:44.96:0,45,478	0/0:7,0:7:18.05:0,18,245	0/0:12,0:13:26.47:0,26,223	0/0:7,0:8:21.02:0,21,266	0/0:6,0:6:12.02:0,12,141	0/0:22,0:23:57.05:0,57,703	0/0:7,0:7:15.01:0,15,164	0/0:17,0:20:41.09:0,41,489	0/0:8,0:8:24:0,24,285	0/0:7,0:7:18.02:0,18,237	0/0:0,0:1:3:0,3,29	0/0:2,0:2:5.99:0,6,64	0/0:5,0:6:14.48:0,14,142	1/1:1,7:8:21.02:204,21,0	0/0:12,0:15:35.57:0,36,392	0/0:9,0:11:32.01:0,32,332	0/0:6,0:7:18.01:0,18,238
chr10	73358086	.	TAG	T	779.80	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.088;DP=344;FS=10.878;HRun=0;HaplotypeScore=46.0460;InbreedingCoeff=0.7924;MQ=90.82;MQ0=0;MQRankSum=-0.233;QD=29.99;ReadPosRankSum=0.744;VQSLOD=4.5570;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:66.22:875,66,0	0/0:7,0:7:21.07:0,21,363	0/0:14,0:14:24.38:0,24,463	0/0:16,0:16:45.15:0,45,773	0/0:17,0:17:42.14:0,42,721	0/0:14,0:14:36.12:0,36,623	0/0:9,0:9:21.07:0,21,364	0/0:39,0:39:99:0,111,1898	0/0:10,0:10:30.10:0,30,519	0/0:11,0:11:30.10:0,30,495	0/0:16,0:16:33.11:0,33,571	0/0:9,0:9:24.08:0,24,415	0/0:4,0:4:12.02:0,12,180	0/0:3,0:3:6.02:0,6,104	0/0:10,0:10:27.09:0,27,465	0/0:8,0:8:24.08:0,24,416	0/0:27,0:27:72.25:0,72,1239	0/0:7,0:7:21.07:0,21,364	0/0:18,0:18:48.12:0,48,756	0/0:11,0:11:30.10:0,30,520	0/0:13,0:13:39.13:0,39,675	0/0:4,0:4:9.03:0,9,156	0/0:6,0:6:18.06:0,18,305	0/0:5,0:5:12.04:0,12,208	0/0:9,0:9:27.09:0,27,468	0/0:13,0:13:39.13:0,39,675	0/0:8,0:8:23.96:0,24,295	0/0:10,0:10:24.08:0,24,415
chr10	73358237	.	TCC	T	1435.88	PASS	AB=0.967;AC=7;AF=0.125;AN=56;BaseQRankSum=3.500;DP=377;FS=3.748;HRun=10;HaplotypeScore=54.9625;InbreedingCoeff=0.6180;MQ=75.29;MQ0=4;MQRankSum=-0.911;QD=17.30;ReadPosRankSum=3.605;VQSLOD=1.8111;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:13:15.01:0,15,137	0/0:5,0:5:15.05:0,15,226	0/0:29,0:11:21.42:0,21,201	0/1:25,1:17:8.45:8,0,145	0/0:3,0:3:6.02:0,6,94	0/0:13,0:13:33.10:0,33,499	0/0:9,0:9:27.07:0,27,376	0/0:22,0:25:35.79:0,36,472	0/0:6,0:6:15.03:0,15,214	1/1:2,16:18:45.12:501,45,0	1/1:0,16:16:45.12:501,45,0	0/0:9,0:19:24:0,24,218	0/0:4,0:8:9.32:0,9,82	0/0:19,0:19:48.16:0,48,757	0/0:14,0:14:30.09:0,30,437	0/0:10,0:10:24.08:0,24,379	0/0:26,0:29:74.65:0,75,1027	0/0:5,0:5:9.01:0,9,85	0/0:18,0:18:41.42:0,41,583	0/0:11,0:11:21.53:0,22,310	0/0:9,0:9:15.05:0,15,236	0/0:3,0:3:3.01:0,3,40	0/0:1,0:6:3.01:0,3,42	0/0:6,0:6:11.97:0,12,103	1/1:1,19:20:51.14:568,51,0	0/0:14,1:15:2.75:0,3,482	0/0:16,0:16:39.13:0,39,617	0/0:3,0:3:3.01:0,3,48
chr10	73361664	.	A	AGGT	12251.05	PASS	AB=0.973;AC=21;AF=0.375;AN=56;BaseQRankSum=-3.278;DP=589;FS=0.000;HRun=0;HaplotypeScore=87.3208;InbreedingCoeff=0.9365;MQ=66.32;MQ0=0;MQRankSum=-4.248;QD=49.80;ReadPosRankSum=4.019;VQSLOD=7.0824;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:30:72.25:1698,72,0	0/0:10,0:10:27.09:0,27,471	0/0:23,0:22:60.19:0,60,1017	0/0:28,0:28:81.17:0,81,1352	0/0:21,0:21:63.22:0,63,1105	0/0:26,0:26:78.27:0,78,1376	0/0:15,0:15:45.15:0,45,794	0/0:33,0:33:99:0,99,1747	0/0:17,0:17:51.17:0,51,900	1/1:4,21:25:72.25:1658,72,0	1/1:0,14:15:36.12:851,36,0	1/1:3,15:18:45.15:1057,45,0	1/1:4,14:19:57.20:1334,57,0	0/0:16,0:16:48.16:0,48,847	0/0:19,0:19:57.18:0,57,978	0/0:13,0:13:39.13:0,39,688	0/1:35,0:36:0.89:1,0,1641	1/1:5,28:35:69.53:1966,70,0	0/0:17,0:17:51.17:0,51,900	0/0:25,0:25:69.22:0,69,1190	0/0:15,0:15:45.15:0,45,794	1/1:1,17:18:48.16:1133,48,0	1/1:2,15:19:48:1134,48,0	1/1:2,12:16:26.97:638,27,0	1/1:0,13:15:33.11:780,33,0	0/0:25,1:26:4.27:0,4,1200	0/0:30,0:29:90.31:0,90,1588	0/0:9,0:9:27.09:0,27,476
chr10	73363509	.	GTAAA	G	2869.08	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.372;DP=501;FS=4.812;HRun=0;HaplotypeScore=79.8291;InbreedingCoeff=0.9883;MQ=68.91;MQ0=0;MQRankSum=0.131;QD=32.24;ReadPosRankSum=2.996;VQSLOD=3.4742;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.23:0,66,1629	0/0:5,0:5:12.04:0,12,284	0/0:17,0:16:27.09:0,27,551	0/0:12,0:12:23.94:0,24,489	0/0:26,0:26:66.23:0,66,1549	0/0:19,0:19:45.15:0,45,1032	0/0:10,0:10:30.10:0,30,709	0/0:30,0:30:72.24:0,72,1637	0/0:17,0:17:39.13:0,39,925	1/1:6,19:25:57.17:939,57,0	1/1:3,13:16:33.11:546,33,0	0/0:12,0:12:30.10:0,30,750	0/0:18,0:18:42.13:0,42,968	0/0:12,0:12:30.10:0,30,679	0/0:20,0:20:51.16:0,51,1196	0/0:19,0:19:48.16:0,48,1168	0/0:21,0:20:57.20:0,57,1383	1/1:5,16:21:22.61:742,23,0	0/0:17,0:17:39.13:0,39,892	0/0:25,0:25:63.22:0,63,1509	0/0:17,0:17:30.04:0,30,618	0/0:11,0:11:33.10:0,33,750	0/0:17,0:17:30.10:0,30,739	0/0:11,0:11:24.08:0,24,561	1/1:5,22:27:48.16:803,48,0	0/0:16,0:16:45.15:0,45,1128	0/0:22,0:22:48.16:0,48,1140	0/0:12,0:12:36.12:0,36,850
chr10	73363606	.	CT	C	3461.04	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=11.398;DP=617;FS=0.433;HRun=1;HaplotypeScore=58.7302;InbreedingCoeff=0.9075;MQ=58.06;MQ0=5;MQRankSum=-0.396;QD=30.36;ReadPosRankSum=1.759;VQSLOD=3.3461;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.21:0,63,1005	0/0:13,0:13:39.13:0,39,623	0/0:17,0:7:21.06:0,21,297	0/1:20,0:13:5.95:6,0,396	0/0:24,0:24:72.20:0,72,1078	0/0:42,0:42:99:0,123,1889	0/0:17,0:17:51.12:0,51,741	0/0:26,0:26:75.25:0,75,1179	0/0:25,0:25:75.19:0,75,1103	0/0:24,0:24:69.22:0,69,1080	0/0:24,0:24:69.21:0,69,1056	1/1:0,16:16:45.15:617,45,0	1/1:0,16:16:45.15:623,45,0	0/0:21,0:21:63.17:0,63,932	0/0:29,0:29:87.28:0,87,1367	0/0:20,0:20:60.19:0,60,936	0/0:21,0:21:63.19:0,63,959	0/0:18,0:18:54.18:0,54,859	0/0:20,0:20:60.16:0,60,910	0/0:32,0:32:96.30:0,96,1486	0/0:15,0:15:45.14:0,45,696	1/1:0,14:14:36.12:500,36,0	1/1:0,24:24:60.20:837,60,0	1/1:0,24:24:63.21:878,63,0	0/0:20,0:20:51.17:0,51,815	0/0:30,0:30:90.28:0,90,1377	0/0:34,0:34:99:0,102,1606	0/0:10,0:10:29.91:0,30,340
chr10	73363839	.	C	CGCG	5873.06	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.455;DP=688;FS=1.350;HRun=0;HaplotypeScore=121.9525;InbreedingCoeff=0.9989;MQ=70.41;MQ0=0;MQRankSum=-13.842;QD=50.63;ReadPosRankSum=0.131;VQSLOD=6.9753;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,156,2592	0/0:7,0:7:21.07:0,21,358	0/0:16,0:16:38.32:0,38,693	0/0:15,0:15:45.11:0,45,688	0/0:37,0:37:99:0,105,1757	0/0:22,0:22:66.18:0,66,1090	0/0:27,0:27:78.27:0,78,1329	0/0:21,0:21:60.12:0,60,954	0/0:22,0:22:66.23:0,66,1122	0/0:24,0:24:72.18:0,72,1145	0/0:17,0:17:51.17:0,51,870	1/1:6,22:30:63.03:1362,63,0	1/1:4,19:25:65.89:1403,66,0	0/0:30,0:30:87.25:0,87,1451	0/0:27,0:27:75.25:0,75,1250	0/0:25,0:25:72.25:0,72,1221	0/0:28,0:28:84.27:0,84,1403	0/0:17,0:17:51.13:0,51,838	0/0:17,0:17:45.10:0,45,729	0/0:29,0:29:81.18:0,81,1313	0/0:36,0:36:99:0,99,1595	1/1:5,16:21:42.14:950,42,0	1/1:2,16:20:48.16:1082,48,0	1/1:1,19:20:48.16:1076,48,0	0/0:24,0:24:72.04:0,72,1153	0/0:28,0:28:81.19:0,81,1316	0/0:37,0:36:99:0,108,1799	0/0:10,0:10:30.10:0,30,507
chr10	73364349	.	T	TGCGCGCGCGC	1518.08	PASS	AB=1.000;AC=6;AF=0.115;AN=52;BaseQRankSum=0.356;DP=408;FS=0.000;HRun=0;HaplotypeScore=133.7650;InbreedingCoeff=0.5423;MQ=56.53;MQ0=5;MQRankSum=-4.752;QD=31.63;ReadPosRankSum=-0.717;VQSLOD=3.1860;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:45.13:0,45,987	0/0:6,0:6:15.05:0,15,396	0/0:20,0:12:22.21:0,22,561	0/0:16,0:14:15.10:0,15,500	0/0:22,0:22:51.18:0,51,1532	0/0:10,0:10:24.07:0,24,628	0/0:19,0:19:48.15:0,48,1185	0/0:36,0:36:66.17:0,66,1803	0/0:17,0:17:39.13:0,39,1210	1/1:2,11:13:30.10:1150,30,0	./.	0/0:11,0:11:13.27:0,13,190	0/0:12,0:12:22.83:0,23,346	0/0:6,0:6:12.04:0,12,359	0/0:13,0:13:30.09:0,30,888	0/0:12,0:12:36.11:0,36,923	0/0:38,0:38:99:0,109,3357	1/1:5,0:10:12.01:458,12,0	0/0:15,0:14:30.10:0,30,913	0/0:13,0:13:30.10:0,30,887	0/0:19,0:19:48.13:0,48,1278	0/1:10,0:8:18.01:18,0,91	0/0:9,0:9:8.71:0,9,198	0/0:9,0:9:4.51:0,5,14	./.	0/1:14,0:14:22.46:22,0,946	0/0:15,0:15:42.13:0,42,1187	0/0:5,0:5:15.05:0,15,477
chr10	73364353	.	C	CGT	387.22	PASS	AB=0.861;AC=5;AF=0.096;AN=52;BaseQRankSum=7.139;DP=402;FS=0.000;HRun=0;HaplotypeScore=72.3962;InbreedingCoeff=0.2955;MQ=55.94;MQ0=6;MQRankSum=-2.735;QD=6.79;ReadPosRankSum=1.753;VQSLOD=3.0593;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,20:28:23.20:376,0,23	0/0:6,0:6:15.05:0,15,222	0/0:21,0:13:15.83:0,16,280	0/0:17,0:15:11.83:0,12,211	0/0:23,0:23:57.16:0,57,789	0/0:9,0:9:27.08:0,27,374	0/0:24,0:24:57.10:0,57,742	0/0:31,0:31:84.20:0,84,1141	0/0:17,0:17:42.13:0,42,618	1/1:8,0:7:14.65:80,15,0	./.	0/0:11,0:11:9.31:0,9,132	0/0:10,0:10:12.86:0,13,167	0/0:5,0:5:12.04:0,12,175	0/0:12,0:12:33.10:0,33,482	0/0:12,0:12:36.10:0,36,524	0/0:39,0:39:99:0,109,1622	0/1:11,0:11:19.27:19,0,25	0/0:13,0:12:36.04:0,36,484	0/0:14,0:14:34.64:0,35,457	0/0:22,0:22:57.11:0,57,773	0/1:10,0:8:30.39:30,0,34	0/0:9,0:9:4.98:0,5,100	0/0:9,0:9:0.89:0,1,2	./.	0/0:14,0:13:33.08:0,33,501	0/0:16,0:16:27.62:0,28,523	0/0:5,0:5:15.05:0,15,223
chr10	73364355	.	C	CGTGTGT	1895.90	PASS	AB=0.935;AC=16;AF=0.296;AN=54;BaseQRankSum=5.535;DP=420;FS=5.602;HRun=0;HaplotypeScore=111.6843;InbreedingCoeff=0.5094;MQ=55.12;MQ0=6;MQRankSum=-6.108;QD=12.99;ReadPosRankSum=-0.001;VQSLOD=1.9854;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:99:149,0,101	0/0:4,0:5:9.03:0,9,166	0/1:20,0:13:32.66:33,0,168	0/1:18,0:16:46.51:47,0,73	0/0:21,0:23:33.11:0,33,626	0/0:9,0:9:12.04:0,12,236	0/0:23,0:27:11.92:0,12,781	0/0:29,0:30:34.60:0,35,589	0/0:16,0:17:39.13:0,39,796	1/1:8,0:7:18.03:241,18,0	0/0:5,0:5:0:0,0,0	1/1:8,4:14:9.46:234,9,0	1/1:5,5:10:15.05:489,15,0	0/0:4,0:4:9.03:0,9,187	0/0:12,0:12:36.04:0,36,689	0/0:12,0:13:30.10:0,30,602	0/0:38,0:40:72.23:0,72,1716	1/1:12,0:12:14.97:311,15,0	0/0:13,0:12:7.27:0,7,127	0/0:12,0:13:21.96:0,22,425	0/0:23,0:23:48.12:0,48,833	1/1:7,2:8:9.03:286,9,0	1/1:7,4:12:0.20:93,0,0	0/1:8,2:11:9.37:187,0,9	./.	0/0:15,0:14:24.03:0,24,427	0/0:14,0:16:31.85:0,32,551	0/0:5,0:5:6.02:0,6,125
chr10	73365535	.	GAGGAGGAGA	G	78.67	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=6.153;DP=413;FS=3.356;HRun=0;HaplotypeScore=115.6067;InbreedingCoeff=0.3560;MQ=55.41;MQ0=9;MQRankSum=-6.621;QD=3.58;ReadPosRankSum=1.121;VQSLOD=2.1805;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:45.01:0,45,1673	0/0:1,0:1:3.01:0,3,144	0/0:35,0:13:35.22:0,35,838	0/0:19,0:11:27:0,27,981	0/0:20,0:20:51.17:0,51,2192	0/0:20,0:20:47.97:0,48,1301	0/0:10,0:10:27.08:0,27,963	0/0:20,0:20:57.05:0,57,1581	0/0:8,0:8:18.06:0,18,695	0/0:20,0:20:11.51:0,12,290	0/0:15,0:15:16.32:0,16,242	0/0:16,0:16:39.06:0,39,540	0/0:12,0:12:18.05:0,18,262	0/0:11,0:11:30.03:0,30,1284	0/0:10,0:10:24.08:0,24,1046	0/0:5,0:5:12.04:0,12,577	0/0:20,0:19:51.16:0,51,1779	1/1:2,6:8:5.92:147,6,0	0/0:15,0:15:39.13:0,39,1310	0/0:7,0:6:15.05:0,15,554	0/0:19,0:19:54.17:0,54,2020	0/0:15,0:15:4.04:0,4,242	0/0:15,0:15:21.05:0,21,303	0/0:16,0:16:3.07:0,3,181	0/1:14,0:14:25.53:26,0,28	0/0:15,0:15:45.14:0,45,1788	0/0:15,0:15:45.15:0,45,1992	0/0:8,0:8:24.08:0,24,951
chr10	73365538	.	GAGGAGA	G	1115.44	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=6.208;DP=402;FS=3.572;HRun=0;HaplotypeScore=88.4160;InbreedingCoeff=0.7382;MQ=56.41;MQ0=9;MQRankSum=-4.447;QD=16.65;ReadPosRankSum=-1.500;VQSLOD=2.6945;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:41.96:0,42,1058	0/0:1,0:1:3.01:0,3,102	0/0:39,0:16:29.05:0,29,457	0/0:19,0:11:26.98:0,27,651	0/0:20,0:20:50.61:0,51,1389	0/0:18,0:18:29.99:0,30,599	0/0:10,0:10:21.06:0,21,570	0/0:20,0:20:47.83:0,48,977	0/0:7,0:7:18.03:0,18,432	1/1:3,15:18:44.73:519,45,0	1/1:7,7:14:6.02:132,6,0	0/0:17,0:17:14.14:0,14,83	0/0:13,0:13:11.42:0,11,43	0/0:10,0:10:27.09:0,27,869	0/0:10,0:10:21.07:0,21,714	0/0:5,0:5:12.04:0,12,409	0/0:19,0:18:48.08:0,48,1062	1/1:7,0:7:8.17:70,8,0	0/0:13,0:13:33.08:0,33,860	0/0:7,0:6:15.03:0,15,356	0/0:18,0:18:42.11:0,42,1224	0/1:14,0:14:2.80:3,0,30	0/0:13,0:13:13.39:0,13,53	0/0:15,0:15:1.01:0,1,26	1/1:2,12:14:27.05:539,27,0	0/0:15,0:15:41.97:0,42,1213	0/0:15,0:15:42.13:0,42,1345	0/0:8,0:8:24.04:0,24,575
chr10	73365541	.	GAGA	G	1733.63	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=9.517;DP=393;FS=1.906;HRun=0;HaplotypeScore=64.8628;InbreedingCoeff=0.7394;MQ=55.94;MQ0=10;MQRankSum=-6.711;QD=14.57;ReadPosRankSum=2.221;VQSLOD=3.0196;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:40.69:0,41,863	0/0:1,0:1:3.01:0,3,69	0/0:38,0:15:23.73:0,24,508	0/0:19,0:11:27.08:0,27,565	0/0:18,0:18:50.77:0,51,1155	0/0:18,0:18:43.94:0,44,782	0/0:10,0:10:27.07:0,27,507	0/0:20,0:20:52.38:0,52,871	0/0:6,0:6:18.05:0,18,365	0/1:18,0:18:92.43:92,0,137	0/1:12,0:12:26.89:27,0,123	1/1:2,15:17:33.11:550,33,0	1/1:1,12:13:15.05:255,15,0	0/0:10,0:10:27.09:0,27,621	0/0:10,0:10:24.03:0,24,502	0/0:5,0:5:12.04:0,12,276	0/0:19,0:18:44.28:0,44,987	1/1:7,0:7:8.16:49,8,0	0/0:14,0:14:42.11:0,42,751	0/0:7,0:6:18.05:0,18,343	0/0:18,0:18:51.17:0,51,1079	1/1:1,12:13:20.26:278,20,0	1/1:1,11:12:15.05:255,15,0	1/1:0,15:15:15.05:251,15,0	1/1:12,0:12:18.93:170,19,0	0/0:15,0:15:42.13:0,42,907	0/0:15,0:15:45.15:0,45,994	0/0:8,0:8:2.55:0,3,449
chr10	73366686	.	C	CTAAT	10510.26	PASS	AB=0.962;AC=19;AF=0.339;AN=56;BaseQRankSum=-9.625;DP=572;FS=3.714;HRun=0;HaplotypeScore=85.5964;InbreedingCoeff=0.9261;MQ=75.05;MQ0=2;MQRankSum=-6.836;QD=52.55;ReadPosRankSum=0.887;VQSLOD=5.4407;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,2105	0/0:6,0:6:18.06:0,18,342	0/0:17,0:17:45.14:0,45,770	0/0:22,0:22:54.62:0,55,896	0/0:32,0:32:90.27:0,90,1632	0/0:22,0:22:63.20:0,63,1161	0/0:13,0:13:33.11:0,33,626	0/0:22,0:22:60.19:0,60,1067	0/0:11,0:11:30.09:0,30,537	1/1:4,22:28:75.23:1870,75,0	1/1:3,22:26:66.05:1578,66,0	1/1:1,23:25:54.19:1455,54,0	1/1:1,14:15:42.14:1131,42,0	0/0:20,0:20:57.18:0,57,1028	0/0:17,0:17:42.13:0,42,763	0/0:17,0:17:45.15:0,45,847	0/1:24,1:25:8.39:8,0,1172	1/1:0,6:7:14.97:341,15,0	0/0:20,0:20:57.12:0,57,962	0/0:29,0:29:87.30:0,87,1649	0/0:39,0:39:99:0,99,1811	1/1:3,7:12:30.10:704,30,0	1/1:4,16:22:51.17:1251,51,0	1/1:1,16:18:45.15:1203,45,0	1/1:1,17:19:36.12:970,36,0	0/0:22,0:22:63.21:0,63,1167	0/0:13,0:13:36.10:0,36,635	0/0:10,0:10:30.10:0,30,569
chr10	73366841	.	CTT	C	923.25	PASS	AB=0.740;AC=13;AF=0.232;AN=56;BaseQRankSum=1.751;DP=504;FS=0.553;HRun=15;HaplotypeScore=71.6589;InbreedingCoeff=0.4517;MQ=75.40;MQ0=15;MQRankSum=0.626;QD=5.84;ReadPosRankSum=3.340;VQSLOD=-0.4251;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,19:28:38.83:342,39,0	0/1:7,0:6:10.57:11,0,110	0/0:23,0:12:8.08:0,8,127	0/0:20,0:17:23.82:0,24,152	0/0:13,0:18:37.40:0,37,379	0/0:16,0:16:26.99:0,27,306	0/0:15,0:20:44.05:0,44,500	0/0:23,0:24:45.59:0,46,508	0/0:17,0:17:39.07:0,39,503	1/1:13,6:20:10.92:161,11,0	1/1:11,10:21:19.82:196,20,0	0/0:5,0:15:11:0,11,87	0/0:14,0:18:7.12:0,7,156	0/0:13,0:13:23.75:0,24,247	0/0:11,0:12:26.50:0,27,285	0/0:14,0:18:44.55:0,45,502	0/0:23,0:24:44.57:0,45,537	1/1:5,3:9:8.25:127,8,0	0/0:16,0:19:48.08:0,48,560	0/0:18,0:18:34.20:0,34,391	0/0:17,0:18:22.89:0,23,277	0/1:5,0:8:15.32:15,0,25	0/1:4,2:17:22.93:23,0,76	0/1:18,2:22:19.22:19,0,126	0/1:6,12:18:45.29:201,0,45	0/0:20,0:21:54.09:0,54,623	0/0:22,0:21:47.27:0,47,515	0/0:6,0:7:17.54:0,18,199
chr10	73366935	.	AC	A	367.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.695;DP=605;FS=5.086;HRun=5;HaplotypeScore=64.6797;InbreedingCoeff=0.9972;MQ=66.76;MQ0=31;MQRankSum=-1.581;QD=20.39;ReadPosRankSum=-0.724;VQSLOD=2.8622;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:61.11:0,61,1078	0/0:10,0:8:24.04:0,24,292	0/0:16,0:11:33.07:0,33,406	0/0:20,0:16:41.44:0,41,529	0/0:22,0:21:63.13:0,63,821	0/0:31,0:30:75.25:0,75,1025	0/0:23,0:20:57.12:0,57,752	0/0:27,0:26:72.23:0,72,964	0/0:17,0:17:51.17:0,51,694	0/0:26,0:25:72.23:0,72,970	0/0:19,0:17:45.11:0,45,580	0/0:16,0:15:42.14:0,42,569	0/0:22,0:22:63.19:0,63,844	0/0:26,0:25:69.23:0,69,941	0/0:15,0:15:45.09:0,45,583	0/0:16,0:16:48.15:0,48,638	0/0:19,0:19:54.12:0,54,701	1/1:3,15:17:42.08:462,42,0	0/0:19,0:19:54.14:0,54,716	0/0:31,0:29:87.28:0,87,1174	0/0:40,0:40:99:0,111,1516	0/0:15,0:14:42.13:0,42,559	0/0:16,0:15:39.13:0,39,533	0/0:20,0:18:45.15:0,45,615	0/0:16,0:16:42.13:0,42,559	0/0:27,0:27:78.25:0,78,1041	0/0:32,0:30:84.27:0,84,1129	0/0:14,0:13:33.10:0,33,435
chr10	73367876	.	ATG	A	200.76	PASS	AB=0.876;AC=4;AF=0.071;AN=56;BaseQRankSum=3.067;DP=472;FS=21.611;HRun=0;HaplotypeScore=79.8468;InbreedingCoeff=-0.0898;MQ=53.08;MQ0=16;MQRankSum=0.465;QD=2.83;ReadPosRankSum=-2.386;VQSLOD=0.0476;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,1:32:99:226,0,429	0/0:17,0:17:4.72:0,5,728	0/0:23,0:6:14.96:0,15,187	0/0:24,0:3:8.82:0,9,101	0/0:14,0:14:38.88:0,39,594	0/0:17,0:17:36.11:0,36,644	0/0:14,0:14:39.12:0,39,651	0/0:23,0:22:63.19:0,63,1011	0/0:18,1:18:48.03:0,48,866	0/0:12,0:12:32.75:0,33,470	0/0:14,0:14:14.78:0,15,180	0/1:15,0:15:51.25:51,0,153	0/1:7,5:12:16.99:17,0,201	0/0:14,1:15:35.88:0,36,601	0/0:9,0:9:24.08:0,24,400	0/0:12,0:12:31.32:0,31,533	0/0:38,0:38:99:0,107,1816	0/0:23,0:23:42.09:0,42,593	0/0:11,0:10:23.42:0,23,387	0/0:9,1:10:23.87:0,24,405	0/0:34,1:31:38.91:0,39,1422	0/0:5,0:5:12.04:0,12,160	0/0:14,0:12:17.97:0,18,266	0/0:21,0:21:17.03:0,17,246	0/0:12,0:12:10.58:0,11,99	0/1:10,2:12:13.02:13,0,410	0/0:15,0:15:40.79:0,41,653	0/0:4,0:4:12.04:0,12,213
chr10	73367878	.	G	GCACACACA	1839.73	PASS	AB=1.000;AC=20;AF=0.385;AN=52;BaseQRankSum=1.793;DP=490;FS=6.305;HRun=0;HaplotypeScore=123.1585;InbreedingCoeff=0.6452;MQ=51.98;MQ0=22;MQRankSum=-2.233;QD=9.48;ReadPosRankSum=-2.931;VQSLOD=1.4242;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:20.08:306,20,0	0/1:17,0:17:16.32:16,0,402	./.	./.	0/0:13,0:13:15.44:0,15,218	0/0:12,0:17:32.82:0,33,580	0/0:15,0:15:9.03:0,9,174	0/0:20,0:19:18.04:0,18,259	0/0:18,0:18:29.96:0,30,603	1/1:7,7:18:21.51:508,22,0	1/1:6,8:16:3.01:64,3,0	1/1:14,0:14:10.03:71,10,0	1/1:12,0:12:11.97:264,12,0	0/0:13,0:13:18.05:0,18,388	0/0:7,0:9:14.94:0,15,254	0/0:11,0:12:18.05:0,18,362	0/0:37,0:39:51.12:0,51,995	1/1:11,0:28:6.02:209,6,0	0/0:10,0:9:5.61:0,6,63	0/0:10,0:11:15.03:0,15,258	0/0:34,0:30:40.09:0,40,845	1/1:3,0:7:3.01:104,3,0	0/0:14,0:12:1.21:0,1,2	1/1:19,1:21:2.96:85,3,0	1/1:2,9:16:12.04:379,12,0	0/1:11,0:12:15.18:15,0,177	0/0:12,0:16:32.26:0,32,698	0/0:4,0:4:6.02:0,6,136
chr10	73368991	.	TAC	T	197.93	PASS	AB=0.919;AC=17;AF=0.370;AN=46;BaseQRankSum=3.845;DP=405;FS=10.620;HRun=0;HaplotypeScore=76.1153;InbreedingCoeff=0.2911;MQ=57.06;MQ0=15;MQRankSum=-2.550;QD=1.32;ReadPosRankSum=2.366;VQSLOD=0.1940;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,9:25:3.01:33,3,0	0/1:8,0:8:41.91:42,0,77	./.	./.	0/0:21,0:20:20.81:0,21,276	0/0:9,0:9:12.02:0,12,148	0/1:19,0:18:40.96:41,0,231	0/0:18,0:17:6.79:0,7,40	0/0:13,0:11:11.07:0,11,138	1/1:11,0:11:2.84:14,3,0	./.	1/1:9,0:13:8.56:43,9,0	1/1:6,0:12:14.24:71,14,0	0/0:14,0:14:15.05:0,15,222	0/1:9,5:14:46.96:47,0,144	0/1:10,2:12:11.85:12,0,174	0/1:16,0:16:4.51:5,0,181	1/1:4,0:8:2.84:14,3,0	0/0:14,0:13:17.97:0,18,169	0/0:18,0:18:2.96:0,3,19	0/0:16,0:15:11.92:0,12,90	1/1:8,0:11:5.50:26,5,0	0/0:10,0:10:3.01:0,3,36	./.	./.	0/0:14,0:14:23.82:0,24,199	0/0:12,0:12:2.98:0,3,22	0/0:9,0:9:11.72:0,12,83
chr10	73369008	.	ACACACACACACACACACACACACACACAGAGAGG	A	1609.30	PASS	AB=0.905;AC=8;AF=0.148;AN=54;BaseQRankSum=2.115;DP=416;FS=0.852;HRun=0;HaplotypeScore=232.9367;InbreedingCoeff=0.3615;MQ=42.70;MQ0=44;MQRankSum=-4.576;QD=25.54;ReadPosRankSum=-3.209;VQSLOD=2.1241;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:12.44:0,12,907	0/0:9,0:9:19.31:0,19,1755	0/0:23,0:10:30.09:0,30,1013	0/0:18,0:7:21.07:0,21,925	0/0:21,0:19:39.11:0,39,3519	0/0:13,0:13:10.13:0,10,1488	0/0:24,0:23:34.10:0,34,3277	0/0:20,0:19:57.20:0,57,3922	0/0:11,0:8:12.71:0,13,1392	0/1:5,8:9:2.75:299,0,3	1/1:5,0:4:9.01:150,9,0	0/1:12,0:10:59.67:396,0,60	0/1:12,0:11:53.85:669,0,54	0/0:13,0:10:24.97:0,25,2603	0/0:17,0:16:24.78:0,25,2755	0/0:13,0:12:30.10:0,30,3030	0/0:25,0:23:46.71:0,47,3600	0/1:10,0:8:28.57:29,0,93	0/0:17,0:17:51.18:0,51,3531	0/0:21,0:18:15.03:0,15,998	0/0:25,0:22:28.34:0,28,2552	1/1:11,0:9:6.02:201,6,0	0/0:7,0:6:2.97:0,3,262	0/0:8,0:8:9.02:0,9,198	./.	0/0:16,0:13:39.13:0,39,3391	0/0:9,0:9:18.06:0,18,1427	0/0:11,0:9:24.08:0,24,1510
chr10	73369036	.	AGAGAGG	A	468.92	PASS	AB=0.985;AC=15;AF=0.326;AN=46;BaseQRankSum=3.899;DP=404;FS=16.616;HRun=0;HaplotypeScore=110.7099;InbreedingCoeff=-0.1184;MQ=40.11;MQ0=56;MQRankSum=-0.604;QD=2.33;ReadPosRankSum=3.611;VQSLOD=0.7922;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:19:8.36:0,8,107	0/1:8,0:8:10:10,0,55	./.	./.	0/1:16,4:16:29.96:30,0,101	0/1:16,0:14:29.50:29,0,86	0/0:21,0:20:18.32:0,18,143	0/0:21,0:20:4.26:0,4,235	0/0:15,0:12:16.92:0,17,186	1/1:16,0:10:12.85:133,13,0	./.	0/1:14,0:10:29.52:38,0,30	0/1:18,0:16:45.74:83,0,46	0/0:11,0:8:17.84:0,18,152	0/0:19,0:16:18.55:0,19,138	0/0:17,0:15:10.17:0,10,195	0/0:30,0:27:22.89:0,23,433	1/1:12,0:10:11.85:79,12,0	0/1:15,0:14:24.88:25,0,223	./.	0/1:34,0:27:66:66,0,108	0/1:15,0:11:3.66:4,0,194	0/0:10,0:8:8.33:0,8,28	0/0:8,0:6:0.38:0,0,1	./.	0/1:15,0:12:53.70:54,0,102	0/1:8,0:8:19.25:19,0,143	0/1:10,0:7:39.04:44,0,39
chr10	73369059	.	G	GAAAC	678.99	PASS	AB=0.949;AC=8;AF=0.160;AN=50;BaseQRankSum=4.747;DP=404;FS=13.160;HRun=0;HaplotypeScore=106.7772;InbreedingCoeff=0.5298;MQ=39.37;MQ0=47;MQRankSum=-2.441;QD=8.59;ReadPosRankSum=-4.190;VQSLOD=-0.3626;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:21:12.34:0,12,152	0/0:4,0:4:5.70:0,6,87	./.	0/0:8,0:2:3.90:0,4,41	0/0:15,0:11:11.69:0,12,173	0/0:13,0:12:18.53:0,19,293	0/0:17,0:16:16.54:0,17,195	0/0:19,0:19:53.19:0,53,699	0/0:15,0:14:20.90:0,21,338	0/0:16,0:9:18.77:0,19,236	./.	1/1:16,1:14:25.78:335,26,0	0/1:17,1:17:13.60:122,0,14	0/0:8,0:6:8.51:0,9,157	0/0:20,0:18:24.07:0,24,368	0/0:18,0:16:33.58:0,34,505	0/0:26,0:24:56.96:0,57,799	0/0:11,0:9:18:0,18,207	0/0:17,0:15:45.15:0,45,665	./.	0/0:34,0:28:42.98:0,43,647	0/1:18,1:15:8.65:219,0,9	1/1:5,7:12:11.62:103,12,0	1/1:3,7:10:3.01:36,3,0	0/0:11,0:10:3:0,3,26	0/0:17,0:16:41.92:0,42,578	0/0:7,0:7:17.55:0,18,253	0/0:7,0:4:12.04:0,12,161
chr10	73369232	.	G	GC	86.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.769;DP=503;FS=5.188;HRun=1;HaplotypeScore=57.3528;InbreedingCoeff=0.9606;MQ=73.86;MQ0=0;MQRankSum=-0.745;QD=14.47;ReadPosRankSum=1.431;VQSLOD=3.1479;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.24:0,75,964	0/0:10,0:10:30.10:0,30,390	0/0:19,0:19:57.19:0,57,740	0/0:19,0:19:54.15:0,54,669	0/0:14,0:14:42.14:0,42,545	0/0:18,0:18:45.15:0,45,583	0/0:14,0:14:39.12:0,39,506	0/0:32,0:32:90.28:0,90,1155	0/0:18,0:18:48.14:0,48,609	0/0:20,0:20:57.17:0,57,740	0/0:19,0:19:45.15:0,45,584	0/0:15,0:14:33.11:0,33,423	0/0:13,0:13:33.11:0,33,428	0/0:14,0:14:39.11:0,39,491	0/0:23,0:23:69.21:0,69,881	0/0:19,0:19:54.16:0,54,682	0/0:23,0:23:54.63:0,55,685	1/1:0,6:6:12.04:173,12,0	0/0:18,0:18:51.17:0,51,662	0/0:11,0:11:24.08:0,24,311	0/0:33,0:33:96.31:0,96,1246	0/0:23,0:23:66.20:0,66,843	0/0:14,0:14:33.09:0,33,413	0/0:11,0:11:30.10:0,30,388	0/0:26,0:26:69.22:0,69,896	0/0:18,0:18:51.15:0,51,647	0/0:8,0:8:21.07:0,21,272	0/0:19,0:19:48.16:0,48,623
chr10	73369296	.	TAAAAA	T	2589.70	PASS	AB=0.913;AC=21;AF=0.375;AN=56;BaseQRankSum=8.154;DP=320;FS=0.000;HRun=11;HaplotypeScore=65.7373;InbreedingCoeff=0.8365;MQ=70.17;MQ0=1;MQRankSum=-8.593;QD=26.70;ReadPosRankSum=0.333;VQSLOD=1.1346;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,8:10:24.07:433,24,0	0/0:6,0:6:12.04:0,12,359	0/0:19,0:12:29.89:0,30,550	0/0:15,0:11:21.04:0,21,373	0/0:12,0:12:30.09:0,30,764	0/0:15,0:15:36.08:0,36,994	0/0:12,0:13:33.08:0,33,831	0/0:27,0:27:72.25:0,72,2059	0/0:12,0:12:36.12:0,36,1021	1/1:3,9:12:27.09:491,27,0	1/1:1,10:11:18.03:327,18,0	1/1:1,3:4:3.01:54,3,0	1/1:1,4:5:12.03:218,12,0	0/0:12,0:13:36.12:0,36,1001	0/0:13,0:13:33.11:0,33,916	0/0:10,0:10:30.10:0,30,885	0/0:15,0:15:36.11:0,36,952	1/1:1,1:2:3.01:55,3,0	0/0:16,0:18:54.19:0,54,1449	0/0:6,0:6:14.94:0,15,364	0/0:9,0:9:24.08:0,24,708	1/1:1,3:4:9.02:164,9,0	1/1:1,7:8:17.97:289,18,0	1/1:1,3:4:9.03:163,9,0	1/1:5,11:16:30.07:545,30,0	0/1:19,2:21:57.88:58,0,1163	0/0:13,0:13:39.13:0,39,1101	0/0:6,0:6:18.06:0,18,538
chr10	73370440	.	TAA	T	1004.16	PASS	AB=0.960;AC=11;AF=0.196;AN=56;BaseQRankSum=0.959;DP=551;FS=1.201;HRun=14;HaplotypeScore=86.2213;InbreedingCoeff=0.8693;MQ=75.18;MQ0=2;MQRankSum=-0.370;QD=9.38;ReadPosRankSum=3.339;VQSLOD=2.1486;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:15:23.54:0,24,239	0/0:5,0:7:11.53:0,12,135	0/1:23,0:17:4.20:4,0,178	0/0:32,0:23:19.93:0,20,211	0/0:33,0:36:82.50:0,83,929	0/0:13,0:19:41.02:0,41,396	0/0:9,0:12:28.55:0,29,300	0/0:17,0:20:29.57:0,30,369	0/0:19,1:21:25.85:0,26,600	0/0:24,0:24:65.90:0,66,546	0/0:27,0:27:68.88:0,69,572	1/1:3,8:13:23.47:190,23,0	1/1:2,16:19:35.76:317,36,0	0/0:19,0:19:44.93:0,45,585	0/0:26,0:26:66.19:0,66,889	0/0:13,0:14:35.60:0,36,456	0/0:15,0:16:27.27:0,27,244	0/0:3,0:15:27.06:0,27,290	0/0:15,0:18:35.05:0,35,405	0/0:32,0:35:91.57:0,92,996	0/0:7,0:7:16.60:0,17,206	1/1:2,15:17:35.93:333,36,0	1/1:6,19:25:20.08:193,20,0	1/1:1,8:9:15.01:139,15,0	0/0:15,0:15:35.96:0,36,301	0/0:30,0:34:82.42:0,82,847	0/0:26,0:27:69.99:0,70,871	0/0:3,0:3:0:0,0,0
chr10	73370446	.	A	AAC	2555.14	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.097;DP=566;FS=10.614;HRun=0;HaplotypeScore=89.8623;InbreedingCoeff=0.9703;MQ=72.24;MQ0=2;MQRankSum=1.287;QD=35.99;ReadPosRankSum=3.429;VQSLOD=5.7972;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:17.51:0,18,210	0/0:7,0:7:18.04:0,18,215	0/0:26,0:17:28.44:0,28,334	0/0:33,0:20:32.04:0,32,359	0/0:34,0:34:99:0,100,1122	0/0:21,0:21:56.73:0,57,546	0/0:11,0:11:33.08:0,33,414	0/0:25,0:25:66.08:0,66,727	0/0:19,0:19:57.10:0,57,709	1/1:0,25:26:71.56:1037,72,0	1/1:1,26:28:77.80:1089,78,0	0/0:15,0:15:38.98:0,39,338	0/0:20,0:20:44.99:0,45,391	0/0:17,0:17:50.96:0,51,634	0/0:24,0:24:72.22:0,72,1005	0/0:13,0:13:39.11:0,39,525	0/0:12,0:12:29.93:0,30,302	0/0:16,0:16:29.18:0,29,179	0/0:19,0:19:57.11:0,57,668	0/0:35,0:35:99:0,105,1167	0/0:9,0:9:24.05:0,24,292	0/0:18,0:18:53.92:0,54,460	0/0:26,0:26:38.42:0,38,307	0/0:11,0:11:20.97:0,21,179	1/1:1,15:17:36.09:573,36,0	0/0:33,0:34:50.15:0,50,1028	0/0:29,0:29:81.20:0,81,1055	0/0:3,0:3:8.97:0,9,73
chr10	73370905	.	TA	T	4427	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.530;DP=561;FS=4.193;HRun=8;HaplotypeScore=53.6718;InbreedingCoeff=0.9838;MQ=69.68;MQ0=0;MQRankSum=0.450;QD=23.80;ReadPosRankSum=3.800;VQSLOD=5.5941;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.16:0,54,649	0/0:12,0:12:30.09:0,30,362	0/0:13,0:12:23.41:0,23,239	0/0:9,0:8:17.92:0,18,171	0/0:30,0:30:81.24:0,81,966	0/0:21,0:21:60.15:0,60,691	0/0:14,0:14:36.10:0,36,423	0/0:30,0:30:84.24:0,84,996	0/0:24,0:24:63.18:0,63,751	1/1:3,27:30:78.12:753,78,0	1/1:1,19:20:54.08:521,54,0	1/1:0,16:16:42.07:406,42,0	1/1:0,24:24:54.09:521,54,0	0/0:16,0:16:39.10:0,39,450	0/0:13,0:13:33.10:0,33,399	0/0:24,0:24:63.19:0,63,759	0/0:8,0:8:24.03:0,24,273	1/1:0,10:10:9.01:87,9,0	0/0:21,0:21:57.17:0,57,679	0/0:31,1:32:58.27:0,58,952	0/0:12,0:12:33.10:0,33,399	1/1:3,29:32:84.12:808,84,0	1/1:2,21:23:53.98:521,54,0	1/1:0,11:11:30.05:290,30,0	1/1:1,19:20:54.09:521,54,0	0/0:25,1:26:40.24:0,40,768	0/0:43,0:43:99:0,126,1521	0/0:6,0:6:12.04:0,12,145
chr10	73372220	.	A	AAC	9054.96	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-13.914;DP=552;FS=15.647;HRun=0;HaplotypeScore=60.7509;InbreedingCoeff=0.9963;MQ=71.45;MQ0=2;MQRankSum=-1.443;QD=47.16;ReadPosRankSum=2.928;VQSLOD=5.0024;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.23:0,69,987	0/0:5,0:5:15.05:0,15,215	0/0:14,0:14:26.35:0,26,293	0/0:7,0:7:20.95:0,21,252	0/0:32,0:32:84.28:0,84,1203	0/0:21,0:21:57.18:0,57,801	0/0:15,0:15:45.13:0,45,610	0/0:24,0:24:72.24:0,72,1016	0/0:22,0:22:63.21:0,63,902	1/1:4,23:28:72.25:1315,72,0	1/1:0,20:20:60.21:1098,60,0	1/1:1,21:21:54.19:990,54,0	1/1:0,20:21:51.17:934,51,0	0/0:15,0:15:42.13:0,42,583	0/0:26,0:26:72.24:0,72,1032	0/0:14,0:14:39.11:0,39,526	0/0:22,0:22:60.20:0,60,860	1/1:0,14:14:42.14:768,42,0	0/0:22,0:22:63.18:0,63,880	0/0:20,0:20:51.16:0,51,714	0/0:23,0:23:60.19:0,60,843	1/1:4,21:25:60.21:1091,60,0	1/1:1,22:23:56.85:1044,57,0	1/1:0,21:21:57.20:1045,57,0	1/1:2,15:17:42.14:770,42,0	0/0:16,0:16:45.15:0,45,645	0/0:30,0:30:90.29:0,90,1272	0/0:8,0:8:24.08:0,24,344
chr10	73373772	.	C	CT	978.83	PASS	AB=1.000;AC=10;AF=0.217;AN=46;BaseQRankSum=2.973;DP=378;FS=1.356;HRun=8;HaplotypeScore=63.0591;InbreedingCoeff=0.7411;MQ=59.14;MQ0=12;MQRankSum=-3.899;QD=9.60;ReadPosRankSum=-1.334;VQSLOD=1.4988;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:40.59:0,41,348	0/0:4,0:4:9.02:0,9,96	0/0:19,0:9:12.98:0,13,152	0/1:27,0:10:4.52:5,0,15	0/0:19,0:19:48.01:0,48,511	0/1:10,0:10:2.74:3,0,164	0/0:5,0:5:15.04:0,15,160	0/0:27,0:23:54.12:0,54,572	0/0:10,0:10:26.31:0,26,230	1/1:16,3:18:50.03:580,50,0	1/1:9,3:12:16.60:184,17,0	./.	./.	0/0:5,0:5:6.01:0,6,63	0/0:13,0:11:20.72:0,21,200	0/0:14,0:14:38.76:0,39,390	0/0:19,0:19:37.14:0,37,311	1/1:16,4:20:26.08:285,26,0	0/0:32,0:28:71.07:0,71,690	0/0:12,0:12:26.71:0,27,269	0/0:12,0:11:24.06:0,24,257	./.	./.	./.	1/1:3,10:13:8.76:71,9,0	0/0:21,0:21:12.12:0,12,430	0/0:15,1:16:27.58:0,28,356	0/0:11,0:10:20.87:0,21,198
chr10	73374538	.	T	TAA	1127.81	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.622;DP=551;FS=17.121;HRun=13;HaplotypeScore=97.2456;InbreedingCoeff=0.7802;MQ=73.58;MQ0=2;MQRankSum=1.699;QD=12.53;ReadPosRankSum=-2.989;VQSLOD=0.1709;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:29:59.01:0,59,521	0/0:7,0:7:14.92:0,15,128	0/1:23,0:16:2.82:3,0,29	0/0:13,0:12:1.63:0,2,40	0/0:23,0:27:30.97:0,31,387	0/0:20,0:21:47.67:0,48,408	0/0:10,0:12:17.70:0,18,194	0/0:27,0:31:56.14:0,56,461	0/0:16,0:17:41.71:0,42,350	1/1:7,9:21:32.89:352,33,0	1/1:6,12:20:44.64:443,45,0	0/0:18,0:18:32.83:0,33,138	0/0:25,0:25:46.25:0,46,191	0/0:21,0:22:44.50:0,45,381	0/0:16,0:18:38.35:0,38,314	0/0:14,0:16:29.53:0,30,286	0/0:22,0:24:50.44:0,50,473	0/0:15,0:15:9.66:0,10,241	0/0:22,0:26:14.39:0,14,262	0/0:23,0:23:44.85:0,45,392	0/0:16,0:17:23.74:0,24,256	0/0:9,0:9:8.84:0,9,43	0/0:15,0:16:24.05:0,24,102	0/0:10,0:10:19.20:0,19,81	1/1:4,20:26:36.10:473,36,0	0/0:18,0:20:44.11:0,44,407	0/0:29,0:31:59.24:0,59,543	0/0:13,0:13:14.91:0,15,133
chr10	73374547	.	AAAAAC	A	2791.42	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.818;DP=534;FS=5.145;HRun=0;HaplotypeScore=109.5118;InbreedingCoeff=0.9804;MQ=73.42;MQ0=2;MQRankSum=-4.046;QD=37.22;ReadPosRankSum=4.801;VQSLOD=2.9643;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.30:0,93,2382	0/0:8,0:8:24.05:0,24,578	0/0:22,0:15:26.21:0,26,305	0/0:12,0:10:8.45:0,8,144	0/0:24,0:24:66.22:0,66,1799	0/0:21,0:21:51.18:0,51,1484	0/0:15,0:15:42.13:0,42,998	0/0:32,0:32:90.29:0,90,2235	0/0:17,0:17:51.14:0,51,1299	0/0:20,0:20:57.18:0,57,1210	0/0:21,0:21:60.15:0,60,1217	1/1:1,16:17:36.09:686,36,0	1/1:1,24:25:37.06:1009,37,0	0/0:23,0:23:69.19:0,69,1676	0/0:17,0:17:51.17:0,51,1283	0/0:16,0:16:48.16:0,48,1265	0/0:25,0:25:75.21:0,75,1955	0/0:17,0:17:48.12:0,48,1137	0/0:21,0:21:63.17:0,63,1573	0/0:18,0:18:51.16:0,51,1452	0/0:13,0:13:39.13:0,39,1136	1/1:0,8:8:18:305,18,0	1/1:1,14:15:30.96:563,31,0	1/1:0,10:10:21.07:403,21,0	0/0:24,0:24:42.12:0,42,927	0/0:22,0:22:66.21:0,66,1704	0/0:31,0:31:93.29:0,93,2354	0/0:9,0:9:22.01:0,22,549
chr10	73375585	.	GAAAAAGAAAAA	G	1143.93	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=5.667;DP=324;FS=0.000;HRun=0;HaplotypeScore=100.1889;InbreedingCoeff=0.6999;MQ=57.79;MQ0=13;MQRankSum=-3.587;QD=26.60;ReadPosRankSum=2.194;VQSLOD=2.6065;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:48.16:0,48,1830	0/0:9,0:9:21.07:0,21,1025	0/0:4,0:1:0:0,0,0	0/0:8,0:3:2.94:0,3,18	0/0:14,0:14:21.06:0,21,797	0/0:8,0:8:21.07:0,21,1055	0/0:7,0:7:18.06:0,18,715	0/0:19,0:19:40.02:0,40,1768	0/0:8,0:7:18.03:0,18,703	1/1:6,3:9:12.04:214,12,0	1/1:7,5:11:15.05:356,15,0	0/0:13,0:13:27.09:0,27,999	0/0:10,0:10:15.05:0,15,566	0/0:7,0:6:15.05:0,15,675	0/0:4,0:4:6.02:0,6,314	0/0:11,0:11:27.09:0,27,1185	0/0:29,0:28:22.26:0,22,2977	0/0:24,0:21:39.09:0,39,1279	0/0:14,0:12:21.06:0,21,926	0/0:9,0:9:24.08:0,24,1107	0/0:12,0:11:30.10:0,30,1159	0/0:8,0:8:15.05:0,15,607	0/0:8,0:8:15.05:0,15,458	0/0:9,0:9:12.04:0,12,435	1/1:4,14:18:24.08:701,24,0	0/0:9,0:9:21.07:0,21,866	0/0:12,0:11:26.92:0,27,1108	0/1:4,0:4:14.19:14,0,165
chr10	73375591	.	GA	G	1276.79	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=6.902;DP=322;FS=7.551;HRun=10;HaplotypeScore=43.1818;InbreedingCoeff=0.6551;MQ=60.98;MQ0=14;MQRankSum=1.332;QD=9.19;ReadPosRankSum=4.353;VQSLOD=1.0862;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:47.98:417,48,0	0/1:8,0:8:1.39:1,0,178	0/0:6,0:2:2.60:0,3,10	0/0:11,0:4:2.74:0,3,12	0/0:12,0:12:21.05:0,21,228	0/0:7,0:7:21.06:0,21,232	0/0:7,0:7:18.05:0,18,199	0/0:22,0:22:47.94:0,48,498	0/0:9,0:8:24.02:0,24,244	0/0:6,0:6:0.71:0,1,7	0/1:11,0:10:5.01:5,0,29	1/1:4,7:11:26.93:218,27,0	1/1:4,5:9:14.99:130,15,0	0/0:8,0:7:18.05:0,18,197	0/0:3,0:3:6.02:0,6,66	0/0:10,0:10:26.46:0,26,275	0/0:30,0:29:74.49:0,74,844	1/1:6,17:20:35.99:312,36,0	0/0:12,0:10:24.05:0,24,257	0/1:9,0:9:1.84:2,0,199	0/0:13,0:12:29.83:0,30,295	1/1:0,7:7:15:130,15,0	1/1:1,8:9:14.82:128,15,0	1/1:4,5:9:11.92:95,12,0	0/1:17,0:17:2.65:23,0,3	0/0:7,0:7:21.06:0,21,231	0/0:15,1:15:10.21:0,10,322	0/0:4,0:4:7:0,7,48
chr10	73377054	.	A	AAGGAGG	6117.39	PASS	AB=0.597;AC=9;AF=0.161;AN=56;BaseQRankSum=-6.913;DP=751;FS=2.925;HRun=0;HaplotypeScore=155.2147;InbreedingCoeff=0.9046;MQ=65.44;MQ0=3;MQRankSum=-13.022;QD=48.94;ReadPosRankSum=0.752;VQSLOD=5.0745;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:57.44:0,57,1402	0/0:13,0:13:24.08:0,24,513	0/0:41,0:30:33.07:0,33,575	0/0:35,0:25:23.74:0,24,426	0/0:28,0:28:69.22:0,69,1369	0/0:27,0:27:69.21:0,69,1386	0/0:29,0:29:60.20:0,60,1230	0/0:31,0:30:46.95:0,47,883	0/0:35,0:35:90.30:0,90,1876	0/0:20,0:20:48.15:0,48,943	0/0:21,0:21:51.16:0,51,1053	0/1:12,24:37:4.12:1805,0,4	1/1:7,12:22:27.09:883,27,0	0/0:24,0:24:54.19:0,54,1152	0/0:38,0:38:87.28:0,87,1768	0/0:27,0:27:66.18:0,66,1295	0/0:21,0:21:51.18:0,51,1090	0/0:22,0:22:60:0,60,1186	0/0:13,0:13:27.07:0,27,488	0/0:22,0:22:48.16:0,48,999	0/0:47,0:47:99:0,120,2389	1/1:4,23:28:57.11:1791,57,0	1/1:2,11:13:30.10:935,30,0	1/1:11,11:25:24.04:704,24,0	0/0:24,0:24:54.16:0,54,1103	0/0:31,0:31:78.25:0,78,1567	0/0:28,0:28:72.25:0,72,1544	0/0:12,0:12:33.11:0,33,679
chr10	73378733	.	G	GAA	3719.33	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-8.684;DP=720;FS=0.000;HRun=8;HaplotypeScore=94.7333;InbreedingCoeff=0.9654;MQ=81.38;MQ0=1;MQRankSum=0.131;QD=35.09;ReadPosRankSum=1.990;VQSLOD=3.4751;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,123,1354	0/0:10,0:10:30.05:0,30,316	0/0:42,0:37:31.37:0,31,511	0/0:27,0:25:38.36:0,38,383	0/0:39,0:39:96.22:0,96,1060	0/0:27,0:27:78.19:0,78,859	0/0:21,0:21:54.11:0,54,592	0/0:25,0:25:66.15:0,66,727	0/0:18,0:18:48.12:0,48,535	0/0:37,0:37:96.23:0,96,1054	0/0:25,0:25:69.18:0,69,769	1/1:2,15:17:5.68:538,6,0	1/1:1,17:19:54.18:834,54,0	0/0:20,0:20:60.14:0,60,654	0/0:24,0:24:57.14:0,57,635	0/0:30,0:30:84.05:0,84,917	0/0:31,0:31:69.58:0,70,888	0/0:19,0:19:51.11:0,51,550	0/0:14,0:14:35.66:0,36,369	0/0:31,0:31:81.20:0,81,903	0/0:20,0:20:51.13:0,51,569	1/1:0,25:27:65.71:1000,66,0	1/1:2,17:20:11.74:633,12,0	1/1:3,19:22:45.15:714,45,0	0/0:20,0:20:54.13:0,54,601	0/0:40,0:40:99:0,109,1173	0/0:30,0:30:81.17:0,81,885	0/0:15,0:15:39.10:0,39,435
chr10	73379448	.	CA	C	916.51	PASS	AB=0.798;AC=21;AF=0.375;AN=56;BaseQRankSum=7.138;DP=436;FS=1.153;HRun=14;HaplotypeScore=63.0667;InbreedingCoeff=0.4479;MQ=61.32;MQ0=4;MQRankSum=0.103;QD=4.72;ReadPosRankSum=4.911;VQSLOD=1.4248;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,22:30:36.62:237,37,0	0/0:10,0:8:8.79:0,9,64	0/0:7,0:5:9.01:0,9,81	0/0:9,0:7:10.42:0,10,65	0/0:16,3:17:3.38:0,3,154	0/1:17,2:17:5.11:5,0,243	0/0:26,4:31:0.65:0,1,265	0/0:19,1:24:38.33:0,38,298	0/1:8,1:9:5.66:6,0,79	1/1:6,13:18:29.63:204,30,0	0/1:4,5:9:4.48:67,0,4	1/1:1,8:11:18.92:115,19,0	1/1:2,4:6:2.93:21,3,0	0/0:18,0:18:16.82:0,17,207	0/0:18,0:17:27:0,27,240	0/0:19,1:21:15.16:0,15,247	0/0:23,0:23:42.79:0,43,353	1/1:4,5:10:10.95:68,11,0	0/0:13,0:13:23.18:0,23,239	0/0:19,0:18:31.18:0,31,264	0/1:15,1:16:5.74:6,0,78	1/1:5,1:6:2.96:21,3,0	0/1:6,7:14:2:92,0,2	0/1:3,10:14:7.04:102,0,7	1/1:4,9:14:22.83:150,23,0	0/0:18,2:19:3.34:0,3,162	0/1:16,0:14:0.72:1,0,97	0/0:6,0:8:23.70:0,24,183
chr10	73379630	.	GGAAAAAAAAAAAA	G	911.87	PASS	AB=0.821;AC=3;AF=0.068;AN=44;BaseQRankSum=3.619;DP=274;FS=2.203;HRun=0;HaplotypeScore=80.8811;InbreedingCoeff=0.2352;MQ=37.81;MQ0=55;MQRankSum=-4.119;QD=26.82;ReadPosRankSum=4.466;VQSLOD=1.9602;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,5:22:44.24:979,0,44	0/0:3,0:2:3.01:0,3,58	./.	0/0:8,0:3:5.85:0,6,85	0/0:13,0:13:38.82:0,39,925	0/0:14,0:10:30.08:0,30,1062	0/0:10,0:7:20.81:0,21,191	0/0:14,0:10:26.77:0,27,464	0/0:7,0:5:11.24:0,11,356	1/1:2,0:1:2.97:20,3,0	0/0:3,0:2:3.01:0,3,154	./.	./.	0/0:7,0:7:15.02:0,15,259	0/0:18,0:14:35.92:0,36,909	0/0:13,0:11:32.92:0,33,707	0/0:17,0:12:27.03:0,27,451	0/0:9,0:5:5.93:0,6,208	0/0:24,0:15:20.14:0,20,921	0/0:7,0:6:17.86:0,18,489	0/0:11,0:6:11.89:0,12,115	0/0:1,0:1:2.94:0,3,18	./.	./.	./.	0/0:16,0:12:24.01:0,24,514	0/0:20,0:14:27.03:0,27,666	0/0:8,0:6:15:0,15,508
chr10	73380894	.	C	CA	445.43	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=1.883;DP=463;FS=6.861;HRun=1;HaplotypeScore=43.6038;InbreedingCoeff=0.8061;MQ=74.46;MQ0=7;MQRankSum=0.080;QD=20.25;ReadPosRankSum=-5.178;VQSLOD=1.7621;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:87.29:0,87,1214	0/0:13,0:13:33.11:0,33,462	0/0:17,0:14:42.14:0,42,576	0/0:16,0:9:23.96:0,24,284	0/0:31,0:31:93.31:0,93,1301	0/0:22,0:22:66.22:0,66,922	0/0:25,0:25:69.21:0,69,946	0/0:26,0:26:78.25:0,78,1075	0/0:21,0:21:63.21:0,63,877	1/1:2,0:2:6.01:73,6,0	1/1:0,3:3:3.01:37,3,0	1/1:0,4:4:3.01:38,3,0	1/1:2,0:2:6:72,6,0	0/0:10,0:10:30.09:0,30,402	0/0:26,0:25:77.73:0,78,1038	0/0:19,0:19:57.15:0,57,746	0/0:24,0:24:72.21:0,72,985	1/1:1,0:1:3.01:38,3,0	0/0:19,0:18:54.18:0,54,755	0/0:34,0:34:99:0,102,1409	0/0:30,0:29:84.25:0,84,1139	1/1:2,0:2:6.02:92,6,0	1/1:4,0:4:12.01:142,12,0	1/1:2,0:2:6.02:96,6,0	1/1:0,2:2:3.01:33,3,0	0/0:34,0:34:99:0,102,1397	0/0:32,0:32:96.30:0,96,1319	0/0:10,0:10:30.10:0,30,414
chr10	73380987	.	G	GA	183.30	PASS	AB=0.893;AC=6;AF=0.158;AN=38;BaseQRankSum=-1.847;DP=463;FS=0.697;HRun=14;HaplotypeScore=87.4955;InbreedingCoeff=-0.1775;MQ=77.80;MQ0=14;MQRankSum=-0.105;QD=1.27;ReadPosRankSum=-0.819;VQSLOD=-0.7095;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,20:32:18.29:225,0,18	0/0:11,0:11:17.66:0,18,115	0/1:47,0:16:23.72:24,0,56	0/0:40,0:22:19.87:0,20,104	0/0:29,0:31:53.90:0,54,315	0/0:20,1:24:21.73:0,22,269	0/0:21,2:22:3.31:0,3,265	0/0:27,0:27:39.27:0,39,254	0/0:22,0:22:38.27:0,38,247	./.	./.	./.	./.	0/1:11,1:14:16.23:16,0,88	0/1:12,1:13:0.62:1,0,114	0/0:17,1:18:18:0,18,242	0/0:30,1:31:39.66:0,40,369	./.	0/1:21,0:23:7.41:7,0,194	0/0:21,1:24:28.71:0,29,299	0/1:12,1:14:14.05:14,0,108	./.	./.	./.	./.	0/0:31,0:31:22.36:0,22,321	0/0:29,0:28:51.16:0,51,328	0/0:5,0:5:6.57:0,7,54
chr10	73381893	.	TAA	T	1581.06	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=8.219;DP=469;FS=11.489;HRun=17;HaplotypeScore=65.4585;InbreedingCoeff=0.9209;MQ=72.44;MQ0=4;MQRankSum=-1.042;QD=12.26;ReadPosRankSum=3.351;VQSLOD=1.7764;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,22:29:31.20:317,31,0	0/0:7,0:7:15.05:0,15,183	0/0:51,0:16:32.56:0,33,284	0/0:34,0:13:16.40:0,16,118	0/0:21,0:22:52.20:0,52,535	0/0:14,0:16:33.10:0,33,400	0/0:7,0:10:20.43:0,20,236	0/0:33,0:39:84.10:0,84,920	0/0:9,0:10:27.08:0,27,332	1/1:6,11:20:29.45:260,29,0	1/1:3,12:15:32.33:262,32,0	1/1:1,8:10:23.67:177,24,0	1/1:4,3:8:5.66:35,6,0	0/0:3,0:6:13.90:0,14,132	0/0:6,0:6:9.03:0,9,114	0/0:9,0:9:14.50:0,14,256	0/0:24,0:27:70.45:0,70,856	1/1:2,6:9:17.64:130,18,0	0/0:17,0:20:9.34:0,9,350	0/0:26,0:28:54.50:0,55,619	0/0:8,0:8:12.02:0,12,136	1/1:3,1:4:2.89:24,3,0	1/1:2,8:11:23.36:169,23,0	1/1:2,13:15:35.81:276,36,0	1/1:2,6:8:17.88:142,18,0	0/0:14,0:16:35.45:0,35,395	0/0:18,0:18:43.17:0,43,488	0/0:8,0:11:25.80:0,26,272
chr10	73383988	.	TAGAA	T	432.99	PASS	AB=0.650;AC=15;AF=0.625;AN=24;BaseQRankSum=-0.535;DP=208;FS=4.393;HRun=0;HaplotypeScore=36.7542;InbreedingCoeff=0.3832;MQ=66.64;MQ0=7;MQRankSum=1.039;QD=5.93;ReadPosRankSum=2.488;VQSLOD=0.6863;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:6:3.16:0,3,8	./.	./.	./.	./.	0/0:13,0:12:9.03:0,9,142	./.	./.	1/1:6,0:6:3.01:44,3,0	./.	./.	1/1:9,0:9:9.03:124,9,0	1/1:7,0:7:6.01:70,6,0	0/0:7,0:6:6.02:0,6,91	1/1:5,0:5:3:25,3,0	1/1:5,0:5:6.02:76,6,0	0/1:6,7:13:13.98:38,0,14	./.	./.	./.	0/0:7,0:6:3.01:0,3,38	./.	./.	1/1:20,0:19:8.48:130,8,0	./.	./.	1/1:7,0:8:3.01:33,3,0	./.
chr10	73384932	.	G	GA	340.19	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.560;DP=408;FS=0.000;HRun=7;HaplotypeScore=54.5308;InbreedingCoeff=0.9062;MQ=85.50;MQ0=0;MQRankSum=-0.821;QD=21.26;ReadPosRankSum=-0.098;VQSLOD=2.7675;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:51.07:0,51,492	0/0:5,0:5:15.02:0,15,145	0/0:15,0:13:30:0,30,280	0/0:24,1:24:49.43:0,49,513	0/0:15,0:15:39.06:0,39,377	0/0:13,0:13:36.06:0,36,348	0/0:10,0:10:24.03:0,24,232	0/0:26,0:26:59.35:0,59,574	0/0:18,0:18:42.06:0,42,406	0/0:9,0:9:24.04:0,24,232	0/0:16,0:16:36.04:0,36,343	0/0:10,0:10:27.04:0,27,261	0/0:9,0:9:26.98:0,27,246	0/0:11,0:11:24.01:0,24,224	0/0:14,0:14:36.04:0,36,342	0/0:12,0:12:36.04:0,36,342	0/0:28,0:28:76.36:0,76,727	1/1:3,13:16:36.11:435,36,0	0/0:8,0:8:15.02:0,15,145	0/0:13,0:13:33.05:0,33,319	0/0:23,0:23:60.07:0,60,572	0/0:11,0:11:33.05:0,33,319	0/0:14,0:14:39.02:0,39,368	0/0:14,1:15:8.82:0,9,362	0/0:15,0:15:39.06:0,39,377	0/0:13,0:13:39.06:0,39,377	0/0:11,0:10:30.05:0,30,290	0/0:11,0:11:33.05:0,33,319
chr10	73385033	.	C	CA	305.33	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=5.209;DP=262;FS=7.618;HRun=6;HaplotypeScore=28.1471;InbreedingCoeff=0.6406;MQ=45.61;MQ0=32;MQRankSum=-6.092;QD=10.90;ReadPosRankSum=0.613;VQSLOD=0.2009;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:8:5.95:0,6,48	0/0:6,0:6:6:0,6,56	0/0:16,0:2:2.92:0,3,17	0/0:19,0:4:12:0,12,114	0/0:9,0:9:2.92:0,3,30	0/0:8,0:8:21.05:0,21,214	0/0:5,0:5:12.03:0,12,122	0/0:24,0:22:51.10:0,51,520	0/0:10,0:10:21.05:0,21,213	0/0:7,0:6:11.35:0,11,83	0/0:9,0:8:4.34:0,4,42	1/1:5,3:8:12.84:100,13,0	1/1:3,4:7:11.06:115,11,0	./.	0/0:6,0:6:12.03:0,12,122	0/0:5,0:5:9.02:0,9,91	0/0:22,0:22:33.02:0,33,336	0/0:5,0:4:1.24:0,1,3	0/0:11,0:8:18.04:0,18,184	0/0:11,0:11:18.01:0,18,170	0/0:1,0:1:3.01:0,3,31	1/1:3,0:3:2.22:7,2,0	1/1:1,7:7:15.05:188,15,0	1/1:1,1:2:3.01:38,3,0	0/0:7,0:7:9.02:0,9,92	0/0:9,0:9:24.05:0,24,245	0/0:11,0:11:18.02:0,18,177	0/0:17,0:14:42.09:0,42,428
chr10	73385036	.	AAAATAAAT	A	263.16	PASS	AC=6;AF=0.125;AN=48;BaseQRankSum=3.213;DP=253;FS=9.685;HRun=0;HaplotypeScore=51.1140;InbreedingCoeff=0.4278;MQ=44.99;MQ0=31;MQRankSum=-0.869;QD=10.12;ReadPosRankSum=-0.791;VQSLOD=0.1818;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:8:3.01:55,3,0	0/0:6,0:6:6.02:0,6,219	0/0:16,0:2:0:0,0,0	./.	0/0:8,0:8:0:0,0,0	0/0:8,0:8:21.07:0,21,858	0/0:5,0:5:9.03:0,9,367	0/0:25,0:23:9.03:0,9,179	0/0:8,0:8:6.02:0,6,245	1/1:4,2:6:6.02:148,6,0	1/1:5,3:7:8.99:169,9,0	0/0:7,0:7:9:0,9,91	0/0:6,0:6:2.99:0,3,24	0/0:5,0:5:3.01:0,3,96	0/0:5,0:5:9.03:0,9,368	0/0:4,0:4:3.01:0,3,122	0/0:21,0:21:27.09:0,27,1102	0/0:3,0:2:6.02:0,6,159	0/0:10,0:7:6.02:0,6,245	0/0:10,0:10:3.01:0,3,119	0/0:1,0:1:3.01:0,3,122	0/0:2,0:2:2.99:0,3,23	./.	./.	./.	0/0:8,0:8:6.02:0,6,196	0/0:11,0:11:21.07:0,21,758	0/0:22,0:19:54.19:0,54,2015
chr10	73385037	.	AAAT	A	535.29	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=6.139;DP=250;FS=0.909;HRun=0;HaplotypeScore=32.0095;InbreedingCoeff=0.4727;MQ=45.24;MQ0=31;MQRankSum=-5.706;QD=10.50;ReadPosRankSum=-0.086;VQSLOD=2.2366;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:8:4.35:4,0,25	0/0:5,0:5:9.03:0,9,161	0/0:16,0:2:2.96:0,3,19	0/0:19,0:4:12:0,12,114	0/0:8,0:8:3:0,3,31	0/0:8,0:8:21.07:0,21,463	0/0:5,0:5:14.98:0,15,247	0/0:24,0:22:57.04:0,57,559	0/0:8,0:8:21.05:0,21,283	0/1:6,0:6:15.12:15,0,50	0/1:8,0:7:18.61:19,0,22	1/1:4,3:7:15.05:224,15,0	1/1:5,1:6:12.04:158,12,0	0/0:5,0:5:3.01:0,3,54	0/0:5,0:5:12.04:0,12,229	0/0:4,0:4:9.02:0,9,127	0/0:21,0:21:33.05:0,33,656	0/0:3,0:2:6.01:0,6,66	0/0:10,0:7:18.05:0,18,255	0/0:9,0:9:18.03:0,18,212	0/0:1,0:1:3.01:0,3,66	1/1:0,2:2:3.01:50,3,0	1/1:8,0:7:15.05:187,15,0	1/1:1,1:2:3.01:37,3,0	0/0:7,0:7:9.02:0,9,92	0/0:8,0:8:24.06:0,24,305	0/0:11,0:11:24.08:0,24,464	0/0:22,0:19:40.22:0,40,1090
chr10	73385086	.	CAAG	C	576.52	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.707;DP=303;FS=1.155;HRun=0;HaplotypeScore=45.3027;InbreedingCoeff=0.8767;MQ=70.84;MQ0=1;MQRankSum=-4.132;QD=28.83;ReadPosRankSum=0.462;VQSLOD=3.3719;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:33.11:0,33,735	0/0:2,0:2:6.02:0,6,134	0/0:8,0:8:24.08:0,24,517	0/0:7,0:7:21.07:0,21,423	0/0:15,0:15:45.15:0,45,1003	0/0:12,0:12:33.10:0,33,695	0/0:9,0:9:21.07:0,21,468	0/0:36,0:36:99:0,102,2183	0/0:10,0:10:30.10:0,30,669	0/0:7,0:7:20.96:0,21,385	0/0:9,0:9:26.95:0,27,512	1/1:0,4:4:9.03:145,9,0	1/1:0,4:4:12.04:194,12,0	0/0:11,0:11:33.11:0,33,736	0/0:7,0:7:21.07:0,21,469	0/0:13,0:13:39.13:0,39,870	0/0:20,0:20:42.14:0,42,937	0/0:7,0:7:21.07:0,21,455	0/0:10,0:10:30.10:0,30,665	0/0:13,0:13:39.13:0,39,870	0/0:4,0:4:12.04:0,12,268	1/1:1,4:5:12.04:195,12,0	1/1:0,2:2:3.01:48,3,0	1/1:0,5:5:9.03:147,9,0	0/0:9,0:9:27.09:0,27,603	0/0:10,0:10:30.10:0,30,654	0/0:20,0:19:57.18:0,57,1228	0/0:29,0:29:87.30:0,87,1941
chr10	73385644	.	T	TGACGAC	3067.42	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-4.673;DP=600;FS=0.000;HRun=0;HaplotypeScore=135.0875;InbreedingCoeff=0.8786;MQ=73.39;MQ0=2;MQRankSum=-8.422;QD=20.18;ReadPosRankSum=-1.667;VQSLOD=3.1293;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:33:3.01:78,3,0	0/0:13,0:13:18.06:0,18,357	0/0:29,0:19:12.01:0,12,150	0/0:22,0:19:9.02:0,9,146	0/0:22,0:22:24.08:0,24,496	0/0:24,0:24:48.15:0,48,944	0/0:24,0:24:33.09:0,33,643	0/0:26,0:26:23.10:0,23,381	0/0:29,0:29:42.13:0,42,817	0/0:19,0:19:24.08:0,24,497	0/0:23,0:23:21.06:0,21,399	1/1:12,8:22:15.05:488,15,0	1/1:12,6:21:24.08:697,24,0	0/0:7,0:7:12.03:0,12,211	0/0:28,0:28:30.10:0,30,621	0/0:26,0:26:45.15:0,45,917	0/0:31,0:31:60.11:0,60,1069	0/0:7,0:23:36.12:0,36,503	0/0:11,0:11:9.03:0,9,186	0/0:21,0:21:24.08:0,24,497	0/0:26,0:26:51.15:0,51,1015	1/1:14,4:18:9.03:292,9,0	1/1:13,8:21:15.05:487,15,0	1/1:15,8:26:28.20:722,28,0	1/1:5,6:11:15.05:488,15,0	0/0:19,0:19:15.05:0,15,311	0/0:20,0:20:48.15:0,48,946	0/0:3,0:3:3.01:0,3,47
chr10	73385871	.	AGAACC	A	1256.30	PASS	AB=0.933;AC=10;AF=0.179;AN=56;BaseQRankSum=4.245;DP=425;FS=8.804;HRun=0;HaplotypeScore=86.0556;InbreedingCoeff=0.4784;MQ=44.45;MQ0=25;MQRankSum=-2.659;QD=12.69;ReadPosRankSum=-3.570;VQSLOD=0.6944;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:24:99:143,0,604	0/0:7,0:7:18.03:0,18,371	0/0:6,0:2:2.94:0,3,18	0/1:4,0:2:9.70:10,0,18	0/0:20,0:19:45.14:0,45,921	0/0:25,0:24:69.23:0,69,1594	0/0:22,0:21:59.73:0,60,1197	0/0:13,0:12:36.08:0,36,756	0/0:21,0:21:63.07:0,63,1153	1/1:16,0:15:28.05:410,28,0	1/1:9,2:11:23.66:350,24,0	0/0:14,0:14:19.39:0,19,406	0/0:16,0:15:21.68:0,22,271	0/0:9,0:9:23.57:0,24,431	0/0:17,0:16:14.93:0,15,865	0/0:10,0:10:24.05:0,24,502	0/0:21,0:20:29.87:0,30,1111	0/1:7,4:10:12.54:379,0,13	0/0:19,1:16:41.87:0,42,742	0/0:22,0:21:59.91:0,60,1166	0/0:11,0:9:27.09:0,27,636	0/0:10,0:10:14.77:0,15,196	0/0:10,0:9:21.11:0,21,227	0/1:15,0:14:10.93:11,0,273	1/1:14,1:15:9:111,9,0	0/0:20,0:20:57.16:0,57,1163	0/0:23,0:21:60.12:0,60,1155	0/0:8,0:4:12.04:0,12,243
chr10	73385876	.	CAAA	C	862.16	PASS	AB=0.757;AC=10;AF=0.179;AN=56;BaseQRankSum=3.655;DP=462;FS=0.622;HRun=16;HaplotypeScore=80.4138;InbreedingCoeff=0.5026;MQ=48.77;MQ0=24;MQRankSum=-0.616;QD=9.27;ReadPosRankSum=3.826;VQSLOD=-0.1095;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:35.64:0,36,384	0/0:6,0:7:17.97:0,18,238	0/0:14,0:6:10.84:0,11,108	0/1:5,0:3:5.03:5,0,21	0/0:17,1:18:0.55:0,1,333	0/0:26,0:26:62.98:0,63,868	0/0:19,0:23:50.99:0,51,694	0/0:15,0:17:39.07:0,39,575	0/0:17,0:18:54.03:0,54,785	0/0:21,0:19:47.69:0,48,481	0/0:14,0:13:13.09:0,13,87	1/1:6,5:14:24.09:241,24,0	0/1:6,8:15:11.31:212,0,11	0/0:10,0:10:24:0,24,340	0/0:16,0:17:44.95:0,45,593	0/0:11,0:12:26.88:0,27,276	0/0:22,0:22:43.96:0,44,577	0/1:21,0:19:2.57:3,0,247	0/0:17,0:15:18.96:0,19,227	0/0:19,0:19:41.99:0,42,569	0/0:12,0:10:15.47:0,15,234	1/1:3,7:10:5.97:65,6,0	1/1:2,8:9:21.02:224,21,0	0/1:3,10:14:4.73:261,0,5	0/0:16,0:15:5.92:0,6,40	0/0:19,0:20:50.91:0,51,627	0/0:20,0:19:46.30:0,46,666	0/0:7,0:4:10.59:0,11,153
chr10	73386075	.	T	TAC	1291.36	PASS	AB=0.726;AC=9;AF=0.161;AN=56;BaseQRankSum=5.318;DP=698;FS=2.048;HRun=0;HaplotypeScore=114.8482;InbreedingCoeff=0.6368;MQ=52.14;MQ0=21;MQRankSum=-4.246;QD=8.84;ReadPosRankSum=-2.014;VQSLOD=3.2712;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:24.04:0,24,272	0/0:8,0:8:24.06:0,24,287	0/0:81,0:10:8.92:0,9,72	0/1:66,0:16:41.19:41,0,129	0/0:17,0:17:39.12:0,39,487	0/0:31,0:31:72.18:0,72,855	0/0:22,0:22:50.83:0,51,588	0/0:32,0:32:66.17:0,66,770	0/0:20,0:20:54.17:0,54,674	0/0:18,0:19:50.98:0,51,592	0/0:17,0:17:35.88:0,36,395	0/1:8,13:20:2.90:359,0,3	1/1:10,6:15:28.29:355,28,0	0/0:16,0:16:42.05:0,42,490	0/0:23,0:23:63.17:0,63,752	0/0:18,0:18:48.02:0,48,577	0/0:29,0:29:75.22:0,75,914	0/0:17,0:16:32.43:0,32,379	0/0:21,0:20:39.03:0,39,431	0/0:15,0:15:39.11:0,39,470	0/0:47,0:47:99:0,111,1356	0/1:3,11:14:20.10:188,0,20	1/1:3,2:5:13.29:159,13,0	1/1:18,6:21:25.48:346,25,0	0/0:13,0:13:30.08:0,30,362	0/0:29,0:29:75.23:0,75,922	0/0:43,0:42:99:0,99,1180	0/0:8,0:8:15.04:0,15,180
chr10	73386098	.	AAC	A	696.47	PASS	AB=0.903;AC=18;AF=0.346;AN=52;BaseQRankSum=3.367;DP=687;FS=7.038;HRun=0;HaplotypeScore=101.8440;InbreedingCoeff=0.0009;MQ=50.48;MQ0=45;MQRankSum=1.096;QD=2.23;ReadPosRankSum=0.890;VQSLOD=1.3188;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:24:0:0,0,0	0/1:6,0:6:21.34:21,0,116	./.	./.	0/0:23,3:26:14.76:0,15,558	0/1:27,2:29:36.42:36,0,450	0/1:22,0:21:51.87:52,0,103	0/0:29,0:25:14.94:0,15,176	0/1:18,4:22:66.68:67,0,336	0/1:13,2:18:19.18:177,0,19	1/1:7,6:14:14.79:131,15,0	0/0:14,0:18:23.95:0,24,169	0/0:10,0:14:25.97:0,26,190	0/1:13,2:15:46.99:47,0,320	0/1:21,2:23:21.65:22,0,492	0/1:18,0:18:1.65:2,0,291	0/0:34,1:35:36.36:0,36,939	1/1:12,0:15:4.06:25,4,0	0/1:19,0:18:9.23:9,0,273	0/0:12,0:13:26.24:0,26,286	0/0:43,8:50:23.38:0,23,714	0/0:12,0:14:11.57:0,12,79	0/0:5,0:8:10.98:0,11,59	0/0:15,0:25:19.68:0,20,141	1/1:5,7:12:8.90:100,9,0	0/1:26,5:31:89.69:90,0,461	0/1:38,4:40:74.96:75,0,502	0/0:6,0:6:9.03:0,9,136
chr10	73387988	.	G	GAAA	5264.17	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=1.977;DP=718;FS=3.138;HRun=9;HaplotypeScore=121.6567;InbreedingCoeff=0.9602;MQ=70.86;MQ0=3;MQRankSum=-2.084;QD=24.60;ReadPosRankSum=-0.995;VQSLOD=2.9987;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:73.63:0,74,940	0/0:5,0:5:9:0,9,114	0/0:34,0:22:38.06:0,38,409	0/0:42,0:33:43.21:0,43,684	0/0:40,0:41:96.17:0,96,1175	0/0:21,0:21:46.62:0,47,603	0/0:18,0:18:48.14:0,48,606	0/0:32,0:32:72.13:0,72,886	0/0:21,0:21:51.10:0,51,629	1/1:8,0:30:61.39:514,61,0	1/1:8,0:27:2.65:268,3,0	1/1:1,14:16:33.11:646,33,0	1/1:3,20:25:54.14:949,54,0	0/0:24,0:25:63.10:0,63,761	0/0:26,0:26:75.22:0,75,934	0/0:21,0:21:48.11:0,48,581	0/0:33,0:34:81.16:0,81,1004	1/1:3,0:17:17.88:238,18,0	0/0:18,0:19:54.06:0,54,632	0/0:28,0:28:75.16:0,75,918	0/0:26,0:26:59.98:0,60,758	1/1:2,17:22:48.09:805,48,0	1/1:8,23:34:59.17:933,59,0	1/1:0,18:23:41.78:682,42,0	1/1:2,0:18:29.88:230,30,0	0/0:27,0:28:40.14:0,40,716	0/0:25,0:25:63.15:0,63,795	0/0:25,0:26:66.11:0,66,814
chr10	73388981	.	CA	C	1133.79	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=6.527;DP=469;FS=3.353;HRun=10;HaplotypeScore=79.0132;InbreedingCoeff=0.7748;MQ=68.12;MQ0=2;MQRankSum=0.071;QD=16.20;ReadPosRankSum=1.866;VQSLOD=4.2404;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.25:0,96,1054	0/0:6,0:6:9.02:0,9,99	0/0:20,0:12:19.42:0,19,192	0/0:33,0:23:27.50:0,28,248	0/0:21,1:22:27.29:0,27,504	0/0:24,0:24:72.14:0,72,782	0/0:14,0:14:38.84:0,39,410	0/0:14,1:15:12.92:0,13,325	0/0:14,0:14:36.10:0,36,398	1/1:5,14:19:44.99:391,45,0	1/1:4,10:14:29.99:260,30,0	0/0:14,0:14:5.65:0,6,86	0/0:9,0:9:6.31:0,6,32	0/0:17,0:17:36.10:0,36,398	0/0:16,0:16:48.07:0,48,510	0/0:19,0:19:48.12:0,48,524	0/0:33,0:33:87.18:0,87,940	1/1:3,9:12:12.12:216,12,0	0/0:18,0:18:42.11:0,42,465	0/0:18,0:18:45.59:0,46,499	0/0:12,0:12:30.08:0,30,332	0/0:5,0:5:8.51:0,9,42	0/1:8,0:8:10.19:10,0,11	0/0:4,0:4:6.62:0,7,26	1/1:1,16:17:47.99:417,48,0	0/0:21,0:21:57.15:0,57,624	0/0:19,0:19:51.13:0,51,559	0/0:8,0:8:14.96:0,15,126
chr10	73388996	.	AG	A	458.10	PASS	AB=0.875;AC=7;AF=0.125;AN=56;BaseQRankSum=8.202;DP=512;FS=0.660;HRun=1;HaplotypeScore=82.6888;InbreedingCoeff=0.5599;MQ=76.62;MQ0=3;MQRankSum=-5.050;QD=11.17;ReadPosRankSum=-3.974;VQSLOD=0.3424;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,1690	0/0:4,0:4:12.03:0,12,153	0/0:37,0:25:4.12:0,4,356	0/0:41,1:26:12.07:0,12,284	0/0:19,0:19:57.19:0,57,810	0/0:24,0:24:72.24:0,72,1023	0/0:19,0:19:34.98:0,35,654	0/0:17,0:17:30.18:0,30,575	0/0:14,0:14:42.11:0,42,555	0/0:17,0:17:51.13:0,51,627	0/0:13,0:13:39.01:0,39,463	1/1:14,1:14:0.36:160,0,0	0/1:6,1:7:27.02:95,0,27	0/0:15,0:15:45.12:0,45,606	0/0:21,0:21:63.19:0,63,850	0/0:18,0:18:54.17:0,54,757	0/0:36,0:36:99:0,102,1415	0/0:15,1:16:29.92:0,30,532	0/0:18,0:18:54.14:0,54,706	0/0:19,0:19:22.02:0,22,654	0/0:16,0:16:48.13:0,48,638	0/0:4,0:4:0.80:0,1,17	1/1:7,3:10:15.31:202,15,0	1/1:7,2:9:6.74:127,7,0	0/0:19,0:19:40.75:0,41,649	0/0:20,0:20:60.20:0,60,858	0/0:17,0:17:51.17:0,51,719	0/0:1,0:1:3.01:0,3,43
chr10	73389026	.	A	AG	4866.05	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-5.173;DP=535;FS=1.270;HRun=6;HaplotypeScore=67.4998;InbreedingCoeff=0.9381;MQ=80.16;MQ0=1;MQRankSum=-0.383;QD=28.46;ReadPosRankSum=2.000;VQSLOD=5.6170;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,41:48:99:1283,102,0	0/0:6,0:6:17.99:0,18,172	0/0:28,0:24:10.18:0,10,309	0/0:30,0:20:10.60:0,11,156	0/0:17,0:17:45.10:0,45,459	0/0:19,0:19:51.11:0,51,520	0/0:24,0:24:60.12:0,60,607	0/0:31,0:31:69.07:0,69,674	0/0:17,0:17:45.09:0,45,452	1/1:1,17:18:48.13:579,48,0	1/1:2,10:12:23.99:281,24,0	1/1:1,15:16:33.11:415,33,0	1/1:0,7:7:15.05:189,15,0	0/0:21,0:21:60.13:0,60,610	0/0:19,0:19:54.11:0,54,545	0/0:15,0:15:36.07:0,36,361	0/0:33,0:33:81.17:0,81,826	1/1:1,18:19:54.16:665,54,0	0/0:27,0:27:77.96:0,78,773	0/0:17,0:17:45.07:0,45,445	0/0:21,0:21:54.10:0,54,544	1/1:0,1:1:3.01:38,3,0	1/1:1,13:14:39.12:489,39,0	1/1:1,16:17:39.12:490,39,0	1/1:4,15:19:36.09:438,36,0	0/0:17,1:18:13.42:0,13,452	0/0:17,0:17:39.08:0,39,397	0/0:3,0:3:6.01:0,6,57
chr10	73389674	.	G	GA	402.95	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.475;DP=597;FS=4.588;HRun=9;HaplotypeScore=73.0278;InbreedingCoeff=0.9515;MQ=81.40;MQ0=0;MQRankSum=-0.316;QD=22.39;ReadPosRankSum=-1.106;VQSLOD=4.1372;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:92.95:0,93,807	0/0:9,0:9:22.15:0,22,205	0/0:30,0:30:55.08:0,55,406	0/0:17,0:17:13.53:0,14,261	0/0:25,0:25:65.98:0,66,573	0/0:25,0:25:71.99:0,72,625	0/0:21,0:21:56.98:0,57,494	0/0:43,0:43:99:0,105,905	0/0:19,0:19:47.95:0,48,409	0/0:23,0:23:62.92:0,63,547	0/0:11,0:11:20.99:0,21,182	0/0:12,0:12:20.99:0,21,182	0/0:20,0:20:47.98:0,48,416	0/0:14,0:14:32.99:0,33,287	0/0:25,0:25:62.98:0,63,547	0/0:23,0:23:53.98:0,54,469	0/0:32,0:32:87.81:0,88,766	1/1:1,17:18:45.12:498,45,0	0/0:26,0:26:65.96:0,66,568	0/0:10,0:10:29.98:0,30,257	0/0:21,0:21:53.98:0,54,469	0/0:12,0:12:29.87:0,30,260	0/0:14,0:14:35.79:0,36,300	0/0:29,0:29:67.52:0,68,574	0/0:8,0:8:14.99:0,15,130	0/0:25,0:25:56.98:0,57,495	0/0:25,0:25:44.59:0,45,548	0/0:19,0:19:43.76:0,44,370
chr10	73389688	.	G	GC	3092.91	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-7.885;DP=579;FS=0.000;HRun=1;HaplotypeScore=61.0387;InbreedingCoeff=0.9942;MQ=76.03;MQ0=0;MQRankSum=0.163;QD=35.55;ReadPosRankSum=2.018;VQSLOD=3.7056;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,1343	0/0:10,0:10:30.10:0,30,386	0/0:21,0:21:49.94:0,50,598	0/0:19,0:19:36.11:0,36,501	0/0:23,0:23:69.22:0,69,891	0/0:25,0:25:72.22:0,72,914	0/0:22,0:22:63.19:0,63,796	0/0:43,0:43:99:0,123,1576	0/0:16,0:16:45.10:0,45,539	0/0:26,0:26:75.16:0,75,947	0/0:9,0:9:27.08:0,27,337	1/1:0,7:7:15.05:224,15,0	1/1:0,22:22:57.19:853,57,0	0/0:13,0:13:39.11:0,39,490	0/0:23,0:23:69.20:0,69,867	0/0:20,0:20:60.18:0,60,765	0/0:35,0:35:99:0,102,1306	0/0:18,0:18:48.12:0,48,604	0/0:24,0:24:69.18:0,69,831	0/0:9,0:9:27.09:0,27,350	0/0:24,0:24:72.18:0,72,876	1/1:2,10:12:24.08:348,24,0	1/1:0,18:18:48.16:719,48,0	1/1:0,28:28:75.25:1123,75,0	0/0:9,0:9:21.07:0,21,272	0/0:21,0:21:60.18:0,60,755	0/0:24,0:24:72.23:0,72,932	0/0:18,0:18:50.65:0,51,633
chr10	73390357	.	GTGGTGA	G	468.45	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=4.497;DP=268;FS=4.155;HRun=0;HaplotypeScore=53.7987;InbreedingCoeff=0.6579;MQ=53.12;MQ0=15;MQRankSum=-4.851;QD=5.45;ReadPosRankSum=1.169;VQSLOD=1.0425;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:15.18:0,15,93	0/0:5,0:5:15.04:0,15,407	1/1:13,0:1:2.04:6,2,0	0/1:16,0:4:13.12:13,0,67	0/0:12,0:11:26.96:0,27,469	0/0:10,0:10:21.39:0,21,247	0/0:11,0:11:30:0,30,376	0/0:10,0:9:24.32:0,24,190	0/0:9,0:9:26.97:0,27,305	1/1:3,0:1:2.97:20,3,0	1/1:3,0:2:2.97:20,3,0	1/1:0,8:8:8.62:196,9,0	1/1:1,11:13:6.02:119,6,0	0/0:14,0:13:36.07:0,36,857	0/0:9,0:9:20.24:0,20,282	0/0:12,0:12:36.06:0,36,771	0/0:12,0:12:35.86:0,36,455	0/0:4,0:4:11.93:0,12,144	0/0:9,0:6:12.63:0,13,233	0/0:9,0:8:18:0,18,221	0/0:16,0:14:32.98:0,33,608	1/1:0,9:9:9.03:205,9,0	1/1:1,5:5:3.01:37,3,0	1/1:1,13:13:2.90:16,3,0	0/0:1,0:1:3.01:0,3,35	0/0:16,0:15:41.99:0,42,651	0/0:13,0:13:35.85:0,36,573	0/0:3,0:2:5.97:0,6,96
chr10	73391214	.	CATTTT	C	1972.65	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.316;DP=445;FS=2.762;HRun=0;HaplotypeScore=85.6968;InbreedingCoeff=0.9294;MQ=69.05;MQ0=3;MQRankSum=-2.062;QD=30.82;ReadPosRankSum=2.641;VQSLOD=3.2851;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.06:0,57,929	0/0:11,0:11:30.09:0,30,726	0/0:17,0:12:35.92:0,36,537	0/0:10,0:5:3.26:0,3,22	0/0:19,0:19:57.10:0,57,1183	0/0:18,0:18:51.88:0,52,1107	0/0:20,0:20:57.04:0,57,1162	0/0:24,0:23:66.01:0,66,1052	0/0:15,0:15:39.10:0,39,940	1/1:9,9:18:50.31:778,50,0	1/1:0,17:20:44.09:484,44,0	0/0:15,0:16:38.40:0,38,497	0/0:15,0:15:18.44:0,18,455	0/0:7,0:7:18.01:0,18,352	0/0:18,0:18:48.08:0,48,985	0/0:13,0:13:35.30:0,35,820	0/0:16,0:16:45.10:0,45,1009	1/1:3,0:4:9.02:107,9,0	0/0:16,0:16:45.05:0,45,606	0/0:19,0:19:57.14:0,57,1388	0/0:9,0:10:25.90:0,26,630	0/0:18,0:18:43.07:0,43,446	0/0:19,0:19:53.11:0,53,460	0/0:12,0:11:26.76:0,27,300	1/1:0,20:22:39.09:760,39,0	0/0:20,0:21:30.42:0,30,1179	0/0:20,0:19:57.13:0,57,1309	0/0:5,0:5:15.05:0,15,382
chr10	73391587	.	T	TCTC	10590.91	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=1.400;DP=578;FS=1.522;HRun=0;HaplotypeScore=81.0371;InbreedingCoeff=0.9894;MQ=78.93;MQ0=0;MQRankSum=-4.485;QD=57.56;ReadPosRankSum=3.560;VQSLOD=7.0256;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.25:0,72,1199	0/0:14,0:14:42.14:0,42,700	0/0:20,0:20:48.13:0,48,744	0/0:9,0:9:24.08:0,24,389	0/0:31,0:31:84.29:0,84,1395	0/0:30,0:30:87.26:0,87,1390	0/0:12,0:12:33.10:0,33,525	0/0:34,0:34:93.30:0,93,1503	0/0:21,0:21:60.20:0,60,1000	1/1:0,30:30:90.31:2040,90,0	1/1:3,26:30:78.27:1752,78,0	1/1:2,16:19:45.15:1017,45,0	1/1:1,21:22:57.20:1287,57,0	0/0:12,0:12:36.11:0,36,572	0/0:22,0:22:63.22:0,63,1043	0/0:12,0:12:36.12:0,36,600	0/0:30,0:30:81.25:0,81,1321	1/1:2,3:6:8.90:151,9,0	0/0:17,0:17:51.16:0,51,824	0/0:30,0:30:78.23:0,78,1270	0/0:7,0:7:21.07:0,21,350	1/1:2,23:25:66.23:1495,66,0	1/1:0,14:14:33.11:747,33,0	1/1:3,12:14:33.11:748,33,0	1/1:0,23:23:60.21:1354,60,0	0/0:27,0:27:51.29:0,51,1199	0/0:30,0:30:84.23:0,84,1297	0/0:10,0:10:30.10:0,30,500
chr10	73392158	.	GGA	G	2565.57	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.758;DP=446;FS=0.000;HRun=0;HaplotypeScore=56.9090;InbreedingCoeff=0.9953;MQ=71.29;MQ0=1;MQRankSum=-1.255;QD=41.38;ReadPosRankSum=1.743;VQSLOD=5.2434;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.21:0,60,1158	0/0:13,0:13:39.13:0,39,754	0/0:6,0:6:17.97:0,18,263	0/0:11,0:10:30.08:0,30,533	0/0:21,0:21:60.21:0,60,1145	0/0:24,0:24:69.18:0,69,1294	0/0:12,0:12:36.12:0,36,696	0/0:25,0:25:72.25:0,72,1392	0/0:17,0:17:51.17:0,51,985	0/0:28,0:28:81.28:0,81,1557	0/0:15,0:15:45.15:0,45,867	1/1:1,13:14:42.14:630,42,0	1/1:0,17:17:51.17:780,51,0	0/0:14,0:14:42.14:0,42,811	0/0:20,0:20:60.21:0,60,1159	0/0:14,0:14:42.14:0,42,811	0/0:16,0:16:42.14:0,42,811	0/0:9,0:9:27.09:0,27,521	0/0:15,0:15:39.13:0,39,732	0/0:19,0:19:57.20:0,57,1101	0/0:16,0:15:45.15:0,45,854	1/1:0,9:10:30.10:458,30,0	1/1:0,10:10:26.96:413,27,0	1/1:0,11:11:30.10:459,30,0	0/0:19,0:19:57.20:0,57,1101	0/0:18,0:18:51.17:0,51,975	0/0:26,0:26:78.27:0,78,1507	0/0:6,0:6:18.06:0,18,348
chr10	73392465	.	A	AT	1669.06	PASS	AB=0.962;AC=12;AF=0.214;AN=56;BaseQRankSum=-3.152;DP=475;FS=0.000;HRun=8;HaplotypeScore=48.7804;InbreedingCoeff=0.8385;MQ=72.59;MQ0=0;MQRankSum=-0.575;QD=18.34;ReadPosRankSum=0.157;VQSLOD=3.0655;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45:0,45,406	0/0:7,0:7:21.01:0,21,192	0/1:11,0:11:1.06:1,0,79	0/0:7,0:7:8.21:0,8,52	0/0:18,0:18:54.03:0,54,494	0/0:12,0:12:33.02:0,33,302	0/1:11,1:12:4.60:5,0,217	0/0:33,0:33:81.02:0,81,739	0/0:17,0:17:42.01:0,42,384	0/0:28,0:28:81.02:0,81,732	0/0:21,0:21:63.03:0,63,577	1/1:3,11:14:30.06:332,30,0	1/1:2,11:13:27.08:312,27,0	0/0:16,0:16:45.02:0,45,412	0/0:16,0:16:45:0,45,404	0/0:16,0:16:45.02:0,45,411	0/0:21,0:21:54.01:0,54,489	0/0:10,0:10:18:0,18,165	0/0:16,0:16:36:0,36,322	0/0:22,0:22:63.02:0,63,571	0/0:10,0:10:30:0,30,270	1/1:1,13:14:39.03:432,39,0	1/1:3,16:19:45.13:520,45,0	1/1:0,8:8:21.06:242,21,0	0/0:18,0:18:51.02:0,51,467	0/0:32,0:32:84.02:0,84,763	0/0:29,0:29:75.02:0,75,680	0/0:18,0:18:39.01:0,39,357
chr10	73392684	.	ACT	A	1891.86	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.396;DP=579;FS=1.877;HRun=0;HaplotypeScore=74.8855;InbreedingCoeff=0.9991;MQ=84.12;MQ0=0;MQRankSum=-1.898;QD=37.84;ReadPosRankSum=-0.361;VQSLOD=5.5547;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,2251	0/0:13,0:13:39.13:0,39,730	0/0:25,0:25:74.99:0,75,1306	0/0:26,0:26:64.34:0,64,1128	0/0:28,0:28:84.27:0,84,1525	0/0:17,0:17:51.17:0,51,939	0/0:18,0:18:51.16:0,51,911	0/0:32,0:32:93.30:0,93,1654	0/0:18,0:18:54.16:0,54,942	1/1:2,14:16:48.13:685,48,0	1/1:5,15:20:51.17:750,51,0	0/0:18,0:18:51.17:0,51,955	0/0:18,0:18:54.17:0,54,980	0/0:12,0:12:33.10:0,33,578	0/0:30,0:30:90.31:0,90,1686	0/0:24,0:24:72.25:0,72,1342	0/0:20,0:20:54.19:0,54,986	0/0:10,0:10:27.08:0,27,473	0/0:26,0:26:78.27:0,78,1431	0/0:19,0:19:57.20:0,57,1067	0/0:28,0:28:81.19:0,81,1437	0/0:11,0:11:33.11:0,33,618	0/0:12,0:12:33.11:0,33,610	0/0:20,0:20:57.20:0,57,1051	1/1:2,12:14:42.13:600,42,0	0/0:27,0:27:78.26:0,78,1419	0/0:24,0:24:69.22:0,69,1260	0/0:10,0:10:30.05:0,30,459
chr10	73392771	.	CA	C	3806	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=11.313;DP=624;FS=2.917;HRun=11;HaplotypeScore=75.0138;InbreedingCoeff=0.8890;MQ=69.54;MQ0=0;MQRankSum=-0.018;QD=18.57;ReadPosRankSum=1.948;VQSLOD=4.8255;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:78.67:0,79,832	0/0:6,0:6:15.04:0,15,160	0/0:23,1:21:3.48:0,3,204	0/1:15,0:12:10.51:11,0,58	0/0:29,2:34:43.57:0,44,814	0/0:22,2:24:15.08:0,15,558	0/0:15,0:15:39.10:0,39,416	0/0:33,0:32:87.21:0,87,920	0/0:20,0:20:60.14:0,60,632	1/1:3,31:34:92.85:757,93,0	1/1:5,29:34:83.84:684,84,0	1/1:2,17:19:44.93:369,45,0	1/1:5,23:29:70.91:565,71,0	0/0:10,0:10:27.07:0,27,288	0/0:18,1:20:32.31:0,32,520	0/0:25,0:25:60.14:0,60,633	0/0:23,0:23:62.99:0,63,654	0/0:2,0:15:34.29:0,34,179	0/0:20,0:21:38.26:0,38,440	0/0:19,0:19:45.11:0,45,473	0/0:12,0:12:18.02:0,18,176	1/1:2,18:21:25.44:393,25,0	1/1:5,16:21:18.94:362,19,0	1/1:2,9:11:23.97:197,24,0	1/1:1,20:21:56.93:468,57,0	0/0:35,1:36:59.54:0,60,821	0/0:28,0:28:70.72:0,71,732	0/0:22,0:23:68.98:0,69,702
chr10	73393787	.	G	GCTA	2814.18	PASS	AB=0.958;AC=7;AF=0.125;AN=56;BaseQRankSum=-4.399;DP=424;FS=4.649;HRun=0;HaplotypeScore=67.2525;InbreedingCoeff=0.8934;MQ=79.61;MQ0=0;MQRankSum=-5.708;QD=40.20;ReadPosRankSum=0.456;VQSLOD=4.4465;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.15:0,45,735	0/0:7,0:7:21.07:0,21,343	0/0:15,0:14:35.60:0,36,525	0/0:21,0:20:42.14:0,42,671	0/0:25,0:25:75.24:0,75,1201	0/0:23,0:23:66.23:0,66,1078	0/0:6,0:6:18.06:0,18,294	0/0:22,0:22:63.20:0,63,975	0/0:10,0:10:24.08:0,24,392	1/1:1,20:21:60.04:1286,60,0	1/1:1,12:13:36.12:802,36,0	0/0:12,0:12:27.09:0,27,441	0/0:13,0:13:36.12:0,36,580	0/0:12,0:12:36.12:0,36,588	0/0:14,0:14:42.13:0,42,653	0/0:10,0:9:24.08:0,24,392	0/0:14,0:14:42.14:0,42,677	0/0:13,0:13:30.57:0,31,491	0/0:6,0:6:15.05:0,15,245	0/0:27,0:27:78.24:0,78,1225	0/0:13,0:13:33.10:0,33,506	0/0:15,0:15:45.15:0,45,735	0/0:11,0:11:30.10:0,30,490	0/0:7,0:7:21.07:0,21,335	1/1:2,11:13:39.13:868,39,0	0/1:22,1:23:0.83:1,0,962	0/0:28,0:28:84.27:0,84,1348	0/0:13,0:13:39.13:0,39,637
chr10	73393813	.	GA	G	1167.82	PASS	AB=0.834;AC=21;AF=0.375;AN=56;BaseQRankSum=7.105;DP=506;FS=10.579;HRun=14;HaplotypeScore=61.1559;InbreedingCoeff=0.5756;MQ=72.52;MQ0=3;MQRankSum=1.866;QD=5.72;ReadPosRankSum=1.695;VQSLOD=1.3608;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,1:12:12.46:0,12,258	0/0:10,0:10:3.47:0,3,174	0/1:40,1:18:24.34:24,0,123	0/0:29,0:17:16.29:0,16,97	0/1:20,4:24:4.82:5,0,365	0/0:18,0:18:45.03:0,45,409	0/1:5,1:6:8.74:9,0,53	0/0:26,4:31:1.99:0,2,391	0/0:11,0:13:29.86:0,30,260	1/1:12,6:20:5.82:164,6,0	0/1:7,10:18:12.44:197,0,12	1/1:1,10:11:17.85:123,18,0	1/1:3,7:10:14.84:103,15,0	0/0:17,0:18:44.95:0,45,394	0/0:19,0:20:41.19:0,41,408	0/0:9,0:10:22.98:0,23,209	0/1:10,1:12:6.58:7,0,103	1/1:2,5:7:14.83:102,15,0	0/0:16,0:16:38.76:0,39,321	0/0:25,3:29:40.45:0,40,503	0/0:8,0:8:15.01:0,15,136	1/1:5,9:15:22.79:150,23,0	1/1:1,9:14:28.98:167,29,0	1/1:2,6:8:11.88:82,12,0	1/1:4,13:18:34.76:232,35,0	0/0:26,2:32:24.65:0,25,481	0/0:31,1:35:76.01:0,76,718	0/0:17,0:19:41.71:0,42,359
chr10	73394580	.	TCACACA	T	1066.03	PASS	AB=0.805;AC=14;AF=0.259;AN=54;BaseQRankSum=5.409;DP=515;FS=1.602;HRun=0;HaplotypeScore=128.4673;InbreedingCoeff=0.7475;MQ=61.71;MQ0=29;MQRankSum=-2.885;QD=9.11;ReadPosRankSum=-0.305;VQSLOD=2.4167;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:31.37:0,31,337	0/0:4,0:4:9.02:0,9,115	./.	0/0:48,0:12:5.98:0,6,78	0/0:22,0:23:32.76:0,33,886	0/0:26,0:26:46.03:0,46,903	0/0:19,0:19:23.20:0,23,612	0/0:23,0:23:20.52:0,21,231	0/0:13,0:12:19.22:0,19,244	1/1:7,0:12:15.52:218,16,0	0/1:9,0:11:0.10:0,0,0	1/1:10,6:16:15.02:217,15,0	1/1:9,5:14:16.76:284,17,0	0/0:14,1:15:23.19:0,23,449	0/0:11,0:11:24.07:0,24,621	0/0:20,0:23:32.98:0,33,720	0/0:14,0:14:30.09:0,30,783	0/0:16,0:15:28.52:0,29,262	0/0:9,0:9:14.80:0,15,204	0/0:11,0:11:21.06:0,21,588	0/0:13,0:20:21:0,21,337	1/1:5,0:4:3.01:50,3,0	1/1:8,5:14:4.96:168,5,0	1/1:17,1:18:6.78:40,7,0	0/1:18,2:25:19.93:255,0,20	0/0:19,0:19:39.12:0,39,1002	0/0:18,0:19:36.05:0,36,709	0/0:8,0:9:27:0,27,330
chr10	73394614	.	ACG	A	1493.07	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=10.062;DP=503;FS=3.187;HRun=0;HaplotypeScore=108.6255;InbreedingCoeff=0.3843;MQ=50.26;MQ0=16;MQRankSum=-1.360;QD=4.90;ReadPosRankSum=-0.186;VQSLOD=3.0203;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,31:39:15.98:346,16,0	0/0:5,0:5:13.91:0,14,118	0/0:9,0:1:2.99:0,3,24	0/0:15,0:1:3.01:0,3,32	0/0:28,0:26:15.99:0,16,480	0/1:25,0:25:7.15:7,0,383	0/0:15,0:14:8.39:0,8,306	0/1:27,0:26:27.92:28,0,302	0/1:16,0:15:30.54:31,0,168	1/1:14,0:13:28.15:198,28,0	1/1:16,0:16:22.04:155,22,0	1/1:15,0:15:24.17:153,24,0	1/1:17,0:17:22.22:145,22,0	0/0:13,0:13:25.53:0,26,206	0/0:17,0:17:27.35:0,27,431	0/0:22,0:22:40.65:0,41,430	0/1:17,0:17:17.98:18,0,374	0/1:14,0:13:26.75:54,0,27	0/0:13,0:11:25.68:0,26,153	0/0:17,0:17:12.06:0,12,382	0/1:28,0:27:26.99:27,0,198	1/1:7,0:6:3:25,3,0	1/1:13,0:13:9.84:63,10,0	1/1:18,0:17:8.77:68,9,0	1/1:27,0:26:41.05:298,41,0	0/0:18,0:18:22.99:0,23,415	0/0:21,5:26:5.66:0,6,456	0/1:11,0:10:62.03:72,0,62
chr10	73394616	.	GCA	G	854.11	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=10.135;DP=508;FS=1.784;HRun=0;HaplotypeScore=113.4527;InbreedingCoeff=0.5903;MQ=50.54;MQ0=17;MQRankSum=-3.854;QD=3.97;ReadPosRankSum=3.064;VQSLOD=2.6411;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:40:2.52:136,3,0	0/1:6,0:6:23.54:24,0,112	0/0:10,0:2:5.98:0,6,68	0/0:13,0:3:9.02:0,9,105	0/0:27,0:25:14.98:0,15,584	0/0:25,0:25:50.66:0,51,584	0/0:15,0:14:29.87:0,30,335	0/0:29,0:28:45.50:0,46,559	0/0:17,0:16:7.49:0,7,317	1/1:4,9:13:28.19:238,28,0	1/1:5,9:14:12.21:69,12,0	1/1:15,0:15:21.02:110,21,0	1/1:18,0:18:19.32:127,19,0	0/0:12,0:12:20.27:0,20,235	0/0:16,0:16:3.57:0,4,492	0/0:21,1:22:40.67:0,41,496	0/1:18,0:18:12.94:13,0,365	1/1:9,0:13:13.81:71,14,0	0/0:12,0:10:9.02:0,9,106	0/0:20,0:19:19.76:0,20,625	0/0:30,0:29:44.82:0,45,561	1/1:8,0:7:2.84:14,3,0	1/1:12,0:12:2.39:33,2,0	0/1:17,0:16:0.19:1,0,0	1/1:13,14:26:14.70:173,15,0	0/0:18,0:18:40:0,40,484	0/0:27,0:27:32.97:0,33,620	0/1:11,0:10:34.95:35,0,101
chr10	73394633	.	CACAT	C	1099.58	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=11.268;DP=504;FS=1.742;HRun=0;HaplotypeScore=136.1342;InbreedingCoeff=0.6047;MQ=54.73;MQ0=9;MQRankSum=-7.200;QD=7.48;ReadPosRankSum=-0.932;VQSLOD=2.9419;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:33:1.42:1,0,108	0/0:4,0:4:11.91:0,12,248	0/0:14,0:7:11.17:0,11,215	0/0:22,0:15:21.02:0,21,514	0/0:22,0:21:56.96:0,57,1104	0/0:21,0:21:59.77:0,60,1043	0/0:16,0:15:25.62:0,26,570	0/0:33,0:33:93.11:0,93,1389	0/0:15,0:14:34.57:0,35,636	0/1:15,0:15:1.01:1,0,151	0/1:15,0:15:45.75:49,0,46	1/1:4,13:17:35.02:475,35,0	1/1:4,13:17:29.25:344,29,0	0/0:13,0:13:30.05:0,30,505	0/0:19,0:19:50.98:0,51,983	0/0:18,0:18:43.72:0,44,847	0/0:20,0:20:40.18:0,40,847	0/1:13,0:13:23.79:135,0,24	0/0:10,0:9:24.03:0,24,306	0/0:21,0:20:25.76:0,26,1083	0/0:30,0:30:56.69:0,57,1047	1/1:6,4:9:10.67:52,11,0	1/1:5,11:16:20.12:199,20,0	1/1:5,5:10:2.47:12,2,0	0/0:18,0:18:12.99:0,13,92	0/0:27,0:27:76.94:0,77,1108	0/0:24,0:24:62.86:0,63,1176	0/0:10,0:10:6.71:0,7,229
chr10	73394657	.	T	TATAC	2749.32	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.007;DP=510;FS=3.600;HRun=0;HaplotypeScore=129.8773;InbreedingCoeff=0.9673;MQ=58.53;MQ0=1;MQRankSum=-9.160;QD=38.18;ReadPosRankSum=-6.288;VQSLOD=1.8391;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:36.12:0,36,568	0/0:6,0:6:18.06:0,18,292	0/0:20,0:15:24.32:0,24,303	0/0:24,0:22:24.84:0,25,354	0/0:28,0:28:63.20:0,63,1017	0/0:23,0:23:54.18:0,54,887	0/0:16,0:16:41.93:0,42,690	0/0:39,0:39:51.17:0,51,818	0/0:15,0:15:36.12:0,36,596	0/0:14,0:14:24.06:0,24,377	0/0:19,0:19:42.59:0,43,627	1/1:10,10:20:36.11:726,36,0	1/1:7,12:19:45.15:892,45,0	0/0:15,0:15:36.12:0,36,585	0/0:20,0:20:48.14:0,48,747	0/0:17,0:17:42.14:0,42,699	0/0:21,0:21:54.17:0,54,862	0/0:5,0:13:23.99:0,24,216	0/0:11,0:11:24.08:0,24,395	0/0:17,0:17:42.14:0,42,687	0/0:25,0:25:57.12:0,57,835	1/1:2,10:12:29.69:591,30,0	1/1:8,8:16:27.09:566,27,0	1/1:2,3:5:6.16:144,6,0	0/0:15,0:15:15.92:0,16,250	0/0:19,0:19:51.14:0,51,778	0/0:22,0:22:54.17:0,54,871	0/0:8,0:8:21.07:0,21,338
chr10	73395275	.	C	CTT	3132.91	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=4.365;DP=557;FS=6.874;HRun=9;HaplotypeScore=133.5708;InbreedingCoeff=0.9237;MQ=74.37;MQ0=2;MQRankSum=-8.643;QD=19.58;ReadPosRankSum=-2.480;VQSLOD=1.2527;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:87.17:0,87,916	0/0:6,0:6:18.03:0,18,184	0/1:22,0:14:7.43:7,0,55	0/0:21,0:17:16.41:0,16,162	0/0:19,0:19:48.09:0,48,490	0/0:12,0:12:33.05:0,33,342	0/0:19,0:19:51.10:0,51,529	0/0:35,0:35:87.03:0,87,854	0/0:16,0:16:36.08:0,36,383	1/1:8,7:15:30.10:431,30,0	1/1:15,13:28:60.18:830,60,0	1/1:8,1:14:32.47:289,32,0	1/1:8,1:14:23.21:230,23,0	0/0:18,0:18:39.06:0,39,394	0/0:19,0:19:51.10:0,51,526	0/0:23,0:23:51.08:0,51,529	0/0:18,0:18:42.09:0,42,447	0/0:16,0:16:33.04:0,33,350	0/0:22,0:22:39.01:0,39,389	0/0:26,0:26:60.07:0,60,628	0/0:12,0:12:27.07:0,27,287	1/1:7,1:17:39.93:383,40,0	1/1:10,2:16:34.97:337,35,0	1/1:7,0:13:23.79:204,24,0	1/1:10,10:19:47.63:630,48,0	0/0:29,0:29:68.96:0,69,699	0/0:27,0:27:50.99:0,51,517	0/0:24,0:24:51.04:0,51,525
chr10	73395284	.	TCTC	T	1062.31	PASS	AB=0.890;AC=8;AF=0.143;AN=56;BaseQRankSum=1.584;DP=528;FS=7.413;HRun=0;HaplotypeScore=152.6419;InbreedingCoeff=-0.0944;MQ=70.62;MQ0=2;MQRankSum=-6.902;QD=7.87;ReadPosRankSum=-2.338;VQSLOD=2.1781;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,1673	0/0:6,0:6:18.01:0,18,268	0/0:21,0:10:4.93:0,5,135	0/0:23,0:16:10.65:0,11,224	0/0:18,0:18:50.50:0,50,784	0/0:14,0:14:42.10:0,42,676	0/0:21,0:21:60.17:0,60,993	0/0:30,0:30:89.54:0,90,1202	0/0:15,0:15:45.02:0,45,746	0/1:18,0:18:51.90:52,0,257	0/1:22,1:23:99:168,0,108	0/1:11,5:16:77.21:257,0,77	0/1:10,3:13:66.81:202,0,67	0/0:17,0:17:39.07:0,39,613	0/0:20,0:20:57.14:0,57,908	0/0:19,0:19:54.13:0,54,881	0/0:20,0:20:57.17:0,57,874	0/0:12,0:12:33.11:0,33,550	0/0:18,0:18:45.09:0,45,675	0/0:21,0:21:63.09:0,63,1033	0/0:13,0:13:32.14:0,32,495	0/1:18,1:19:92.85:154,0,93	0/1:12,3:15:96.46:96,0,171	0/1:9,3:12:3.18:188,0,3	0/1:19,0:17:80.32:80,0,130	0/0:25,0:25:74.89:0,75,1129	0/0:24,0:24:63.16:0,63,1006	0/0:20,0:20:57.04:0,57,810
chr10	73395287	.	C	CT	2350.05	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=-4.590;DP=521;FS=7.970;HRun=3;HaplotypeScore=131.0026;InbreedingCoeff=0.2678;MQ=69.03;MQ0=2;MQRankSum=-2.698;QD=5.01;ReadPosRankSum=-1.133;VQSLOD=-0.3387;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:0.14:0,0,11	1/1:6,0:6:0.94:16,1,0	0/0:21,0:8:13.34:0,13,104	0/1:23,0:16:36.59:37,0,143	1/1:20,0:20:5.96:103,6,0	0/1:14,0:14:1.41:9,0,1	0/1:21,0:21:2.85:41,0,3	1/1:28,0:28:31.62:244,32,0	0/0:16,0:16:6.60:0,7,14	1/1:16,0:17:12.86:115,13,0	1/1:20,0:20:32.23:218,32,0	1/1:8,8:16:29.50:177,29,0	1/1:7,6:13:18.16:140,18,0	1/1:15,0:15:1.24:45,1,0	0/1:20,0:20:1.87:43,0,2	1/1:19,0:19:2.81:56,3,0	1/1:20,0:20:1.06:37,1,0	1/1:12,0:12:1.53:29,2,0	1/1:17,0:17:7.90:103,8,0	1/1:20,0:20:4.01:54,4,0	0/0:14,0:14:3.57:0,4,8	1/1:6,14:20:28.54:238,29,0	1/1:6,9:15:30.87:170,31,0	1/1:8,5:13:16.04:162,16,0	1/1:18,0:16:33.60:179,34,0	1/1:26,0:26:18.51:185,19,0	0/1:23,0:23:3.17:19,0,3	1/1:18,0:18:7.01:65,7,0
chr10	73395290	.	TC	T	15539.06	PASS	AB=0.885;AC=53;AF=0.946;AN=56;BaseQRankSum=-6.690;DP=515;FS=0.000;HRun=1;HaplotypeScore=83.0252;InbreedingCoeff=0.6125;MQ=67.49;MQ0=2;MQRankSum=-0.120;QD=31.39;ReadPosRankSum=2.730;VQSLOD=4.5644;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:93.31:1300,93,0	1/1:0,6:6:15.05:210,15,0	0/0:17,2:7:12.46:0,12,153	0/1:20,3:15:50.56:51,0,179	1/1:0,19:19:54.09:704,54,0	1/1:0,14:14:42.14:587,42,0	1/1:0,21:21:57.19:794,57,0	1/1:0,22:22:66.18:864,66,0	1/1:0,17:17:45.15:629,45,0	1/1:2,13:15:35.79:491,36,0	1/1:4,17:21:37.96:508,38,0	1/1:17,1:18:30.59:269,31,0	1/1:11,2:13:26.14:253,26,0	1/1:0,15:15:33.11:458,33,0	1/1:0,20:20:54.18:752,54,0	1/1:0,18:18:48.16:668,48,0	1/1:0,21:21:57.19:797,57,0	1/1:0,14:14:33.11:461,33,0	1/1:0,18:18:39.13:539,39,0	1/1:0,20:20:57.19:795,57,0	1/1:1,11:12:27.09:377,27,0	1/1:21,0:21:46.43:367,46,0	1/1:14,1:15:29.68:248,30,0	1/1:12,1:13:23.64:258,24,0	1/1:5,14:17:47.87:626,48,0	1/1:0,25:25:75.24:1026,75,0	1/1:0,23:23:60.20:839,60,0	1/1:0,17:17:48.16:668,48,0
chr10	73395292	.	TC	T	824.69	PASS	AB=0.776;AC=9;AF=0.161;AN=56;BaseQRankSum=4.360;DP=516;FS=2.728;HRun=1;HaplotypeScore=135.0963;InbreedingCoeff=0.5418;MQ=67.26;MQ0=2;MQRankSum=-7.774;QD=8.01;ReadPosRankSum=-4.016;VQSLOD=-0.5113;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:71.55:0,72,247	0/0:6,0:6:9.19:0,9,31	0/0:19,0:7:8.74:0,9,106	0/0:24,0:16:1.36:0,1,106	0/0:19,0:19:28.09:0,28,116	0/0:15,0:15:34.48:0,34,133	0/0:21,0:21:37.14:0,37,170	0/0:19,0:19:23.69:0,24,105	0/0:18,0:18:24.58:0,25,131	0/0:15,0:15:17.34:0,17,103	0/1:22,0:22:22.34:22,0,64	0/1:8,10:18:4.39:208,0,4	1/1:7,6:13:6.70:107,7,0	0/0:13,0:13:23.78:0,24,89	0/0:19,0:19:35.16:0,35,131	0/0:18,0:18:31.97:0,32,118	0/0:22,0:22:34.57:0,35,139	0/0:15,0:15:13.90:0,14,71	0/0:17,0:17:25.23:0,25,123	0/0:21,0:21:23.62:0,24,133	0/0:12,0:12:19.09:0,19,67	1/1:5,16:21:29.92:333,30,0	1/1:7,9:16:19.22:188,19,0	0/1:7,6:13:11.14:116,0,11	0/0:20,0:18:21.54:0,22,121	0/0:25,0:25:45.94:0,46,222	0/0:23,0:23:40.19:0,40,142	0/0:17,0:17:6.06:0,6,48
chr10	73395500	.	T	TGACA	3697.13	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.553;DP=586;FS=3.427;HRun=0;HaplotypeScore=92.4013;InbreedingCoeff=0.9964;MQ=86.73;MQ0=0;MQRankSum=-0.856;QD=62.66;ReadPosRankSum=2.629;VQSLOD=5.7709;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,2150	0/0:10,0:10:30.08:0,30,514	0/0:21,0:21:47.34:0,47,875	0/0:18,0:18:39.12:0,39,652	0/0:26,0:26:69.22:0,69,1254	0/0:15,0:15:45.14:0,45,777	0/0:17,0:17:51.17:0,51,943	0/0:24,0:24:63.20:0,63,1088	0/0:15,0:15:42.13:0,42,731	1/1:0,14:14:39.13:980,39,0	1/1:4,20:24:57.67:1518,58,0	0/0:32,0:32:93.29:0,93,1667	0/0:13,0:13:36.12:0,36,671	0/0:23,0:23:66.18:0,66,1136	0/0:19,0:19:51.15:0,51,889	0/0:15,0:15:42.14:0,42,783	0/0:26,0:26:75.22:0,75,1335	0/0:16,0:16:42.12:0,42,738	0/0:15,0:15:36.12:0,36,671	0/0:30,0:30:90.28:0,90,1588	0/0:41,0:41:99:0,120,2164	0/0:16,0:16:45.12:0,45,747	0/0:9,0:9:27.06:0,27,441	0/0:21,0:21:60.17:0,60,1043	1/1:1,19:21:45.15:1199,45,0	0/0:24,0:24:51.24:0,51,1239	0/0:34,0:34:93.29:0,93,1670	0/0:6,0:6:18.06:0,18,335
chr10	73396082	.	C	CG	788.24	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=8.152;DP=416;FS=11.848;HRun=2;HaplotypeScore=64.7061;InbreedingCoeff=0.8944;MQ=50.10;MQ0=8;MQRankSum=4.460;QD=9.98;ReadPosRankSum=-3.061;VQSLOD=-0.4356;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:39.96:0,40,356	0/0:7,0:7:19.42:0,19,140	1/1:12,0:4:4.30:15,4,0	0/1:7,0:3:0:0,0,0	0/0:19,0:19:30.92:0,31,235	0/0:8,0:8:16.46:0,16,130	0/0:16,0:16:40.33:0,40,270	0/0:22,0:21:51.55:0,52,410	0/0:11,0:10:17.83:0,18,128	1/1:3,18:26:63.72:482,64,0	1/1:2,13:17:25.48:174,25,0	0/0:15,0:14:35.90:0,36,313	0/0:8,0:7:15:0,15,130	0/0:11,0:11:23.64:0,24,176	0/0:17,0:17:41.63:0,42,332	0/0:13,0:13:32.53:0,33,262	0/0:29,0:27:73.76:0,74,610	0/0:22,0:21:41.88:0,42,351	0/0:14,0:14:35.70:0,36,287	0/0:15,0:15:29.87:0,30,265	0/0:14,0:14:20.26:0,20,167	0/0:8,0:8:20.72:0,21,145	0/0:10,0:10:18.41:0,18,151	0/0:7,0:6:11.96:0,12,114	1/1:13,1:16:33.13:266,33,0	0/0:22,0:22:61.81:0,62,507	0/0:14,0:14:40.14:0,40,288	0/0:9,0:8:23.19:0,23,199
chr10	73396294	.	A	AT	1321.19	PASS	AB=0.579;AC=9;AF=0.161;AN=56;BaseQRankSum=-8.261;DP=586;FS=6.437;HRun=11;HaplotypeScore=72.9079;InbreedingCoeff=0.7534;MQ=74.75;MQ0=2;MQRankSum=-0.307;QD=15.19;ReadPosRankSum=2.186;VQSLOD=4.2971;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:58.81:0,59,447	0/0:11,0:11:20.91:0,21,163	0/0:13,0:15:12.30:0,12,177	0/0:16,0:16:14.95:0,15,160	0/0:29,0:30:70.73:0,71,540	0/0:14,0:14:29.86:0,30,232	0/0:18,0:20:48.86:0,49,357	0/0:27,0:27:62.69:0,63,483	0/0:29,0:29:65.67:0,66,505	0/0:4,0:19:28.50:0,28,82	0/0:4,0:27:44.79:0,45,129	0/1:6,16:22:21.60:348,0,22	1/1:1,13:14:30.06:305,30,0	0/0:16,0:16:32.79:0,33,252	0/0:25,0:25:53.74:0,54,418	0/0:28,0:28:56.70:0,57,437	0/0:19,0:19:50.80:0,51,395	0/0:19,0:18:47.78:0,48,368	0/0:23,0:24:49.77:0,50,374	0/0:24,1:25:2.25:0,2,201	0/0:21,0:21:35.80:0,36,279	1/1:3,13:16:3.51:209,4,0	1/1:6,15:21:33.53:331,34,0	1/1:2,12:14:9.83:281,10,0	0/0:4,0:17:24.42:0,24,71	0/0:25,0:25:50.73:0,51,393	0/0:34,0:36:78.34:0,78,586	0/0:11,0:11:23.87:0,24,186
chr10	73397060	.	TG	T	339.52	PASS	AB=0.722;AC=7;AF=0.125;AN=56;BaseQRankSum=7.196;DP=456;FS=8.297;HRun=2;HaplotypeScore=63.4261;InbreedingCoeff=0.7673;MQ=59.07;MQ0=23;MQRankSum=-0.149;QD=6.17;ReadPosRankSum=-0.237;VQSLOD=0.0123;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:65.69:0,66,806	0/0:3,0:3:6.02:0,6,90	0/0:18,0:6:11.39:0,11,159	0/0:24,0:14:29.58:0,30,366	0/0:13,0:13:21.54:0,22,281	0/0:13,0:12:26.45:0,26,334	0/0:25,0:25:54.85:0,55,672	0/0:17,0:16:45.14:0,45,580	0/0:15,0:15:31.62:0,32,352	1/1:14,0:13:24.70:147,25,0	1/1:7,3:9:10.23:50,10,0	0/0:19,1:19:50.25:0,50,569	0/0:9,0:9:24.08:0,24,316	0/0:16,0:16:31.24:0,31,385	0/0:14,0:14:36.12:0,36,490	0/0:9,0:8:21.07:0,21,290	0/0:16,2:18:30.11:0,30,629	0/1:8,5:12:99:120,0,242	0/0:23,0:21:63.19:0,63,809	0/0:8,0:7:14.72:0,15,171	0/0:36,0:35:86.74:0,87,1100	0/0:15,0:14:38.67:0,39,470	0/0:4,0:4:12.04:0,12,160	0/0:31,1:30:56.73:0,57,711	1/1:17,1:17:32.93:166,33,0	0/0:16,0:14:27.64:0,28,406	0/0:14,0:13:36.05:0,36,449	0/0:12,0:11:32.59:0,33,419
chr10	73397061	.	GGTGT	G	87.23	PASS	AB=0.970;AC=11;AF=0.250;AN=44;BaseQRankSum=1.660;DP=470;FS=0.000;HRun=0;HaplotypeScore=88.3913;InbreedingCoeff=0.3533;MQ=58.03;MQ0=24;MQRankSum=0.446;QD=0.61;ReadPosRankSum=0.991;VQSLOD=1.5626;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:16.03:0,16,210	0/0:3,0:3:6.02:0,6,114	./.	0/1:24,0:14:0:0,0,0	0/0:13,0:13:0:0,0,0	0/0:14,0:13:8.69:0,9,81	0/0:26,0:26:5.70:0,6,70	./.	0/0:15,0:14:11.80:0,12,133	./.	./.	0/1:18,1:19:16.18:37,0,16	./.	0/0:15,0:18:8.77:0,9,151	0/0:14,0:14:12.04:0,12,268	0/0:10,0:9:6.02:0,6,139	0/1:19,0:19:30.13:30,0,151	0/0:14,0:13:8.25:0,8,70	0/0:24,0:22:3.01:0,3,63	0/0:9,0:8:2.74:0,3,12	0/0:40,0:39:14.76:0,15,162	1/1:13,1:15:3:28,3,0	./.	1/1:25,6:29:3.01:46,3,0	1/1:18,0:17:5.82:50,6,0	1/1:16,0:14:2.90:17,3,0	0/0:16,0:15:8.38:0,8,105	0/0:13,0:12:11.71:0,12,168
chr10	73397167	.	G	GGGGA	2491.39	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-3.920;DP=407;FS=2.238;HRun=0;HaplotypeScore=79.0536;InbreedingCoeff=0.9706;MQ=97.99;MQ0=0;MQRankSum=-5.429;QD=38.93;ReadPosRankSum=0.536;VQSLOD=3.7300;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:63.20:0,63,1087	0/0:6,0:6:17.85:0,18,285	0/0:22,0:22:51.90:0,52,711	0/0:22,0:22:51.12:0,51,871	0/0:18,0:18:51.17:0,51,922	0/0:18,0:18:51.17:0,51,923	0/0:15,0:14:36.12:0,36,649	0/0:17,0:17:48.16:0,48,863	0/0:12,0:12:36.12:0,36,652	0/0:13,0:13:39.08:0,39,618	0/0:16,0:16:42.12:0,42,705	1/1:2,12:15:36.12:915,36,0	1/1:0,6:8:21.07:533,21,0	0/0:5,0:5:9.03:0,9,163	0/0:13,0:13:39.13:0,39,706	0/0:8,0:8:24.08:0,24,436	0/0:12,0:12:30.06:0,30,510	0/0:11,0:11:33.09:0,33,554	0/0:12,0:12:36.10:0,36,568	0/0:21,0:21:63.22:0,63,1139	0/0:21,0:21:54.18:0,54,961	1/1:5,6:16:15.04:385,15,0	1/1:3,3:11:14.94:327,15,0	1/1:1,12:14:20.86:504,21,0	0/0:10,0:10:27.05:0,27,459	0/0:23,0:23:63.13:0,63,1104	0/0:17,0:17:51.17:0,51,924	0/0:5,0:5:15.05:0,15,272
chr10	73397331	.	T	TAA	196.99	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.127;DP=472;FS=11.865;HRun=0;HaplotypeScore=67.7126;InbreedingCoeff=0.8611;MQ=74.54;MQ0=4;MQRankSum=-1.407;QD=4.69;ReadPosRankSum=-0.429;VQSLOD=1.1159;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.21:0,66,1013	0/0:7,0:7:21.03:0,21,261	0/0:37,0:17:31.48:0,31,460	0/0:23,0:12:20.61:0,21,238	0/0:32,0:32:93.26:0,93,1412	0/0:16,0:16:48.15:0,48,737	0/0:10,0:10:30.10:0,30,471	0/0:28,0:28:63.37:0,63,944	0/0:7,0:7:21.07:0,21,333	0/0:22,0:22:56.73:0,57,815	0/0:18,0:18:51.12:0,51,708	1/1:3,7:10:7.88:73,8,0	1/1:9,1:11:14.38:130,14,0	0/0:8,0:8:24.08:0,24,387	0/0:18,0:18:45.15:0,45,711	0/0:15,0:15:42.14:0,42,669	0/0:19,0:19:42.11:0,42,631	0/0:20,0:20:60.18:0,60,911	0/0:22,0:22:59.62:0,60,921	0/0:15,0:15:44.63:0,45,661	0/0:10,0:10:28.91:0,29,429	1/1:10,0:10:1.35:36,1,0	0/0:10,0:10:6.34:0,6,16	1/1:9,0:9:9.84:95,10,0	0/0:11,0:11:30.10:0,30,431	0/0:18,0:18:48.01:0,48,690	0/0:26,0:26:78.25:0,78,1207	0/0:14,0:14:39.13:0,39,611
chr10	73397442	.	AGGAGAG	A	1299.95	PASS	AB=0.983;AC=9;AF=0.167;AN=54;BaseQRankSum=6.790;DP=544;FS=15.864;HRun=0;HaplotypeScore=123.1164;InbreedingCoeff=0.7764;MQ=88.31;MQ0=4;MQRankSum=-5.833;QD=10.83;ReadPosRankSum=1.768;VQSLOD=1.8595;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:66.17:0,66,2095	0/0:3,0:3:9.03:0,9,304	0/0:52,0:37:62.88:0,63,1437	0/1:57,1:38:12.82:13,0,1007	0/0:14,0:14:39.13:0,39,1313	0/0:15,0:15:30.10:0,30,1014	0/0:15,0:15:39.13:0,39,1293	0/0:23,0:23:45.15:0,45,1391	0/0:18,0:18:48.16:0,48,1599	0/0:11,0:11:21.07:0,21,622	0/0:11,0:11:24.08:0,24,813	1/1:5,17:22:21.07:460,21,0	1/1:7,11:18:27.09:591,27,0	0/0:19,0:19:45.12:0,45,1373	0/0:28,0:27:66.23:0,66,2149	0/0:20,0:20:45.15:0,45,1466	0/0:20,0:20:48.16:0,48,1608	0/0:17,0:19:15.28:0,15,1404	0/0:21,0:21:45.14:0,45,1331	0/0:10,0:10:27.09:0,27,844	0/0:20,0:20:42.10:0,42,1425	1/1:1,2:3:6.02:131,6,0	./.	1/1:6,12:19:3.79:252,4,0	0/0:14,0:14:33.11:0,33,1110	0/0:20,0:20:51.16:0,51,1567	0/0:28,0:28:66.20:0,66,2054	0/0:10,0:10:21.07:0,21,710
chr10	73398845	.	A	AG	4457.82	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.615;DP=647;FS=12.686;HRun=0;HaplotypeScore=64.3028;InbreedingCoeff=0.9991;MQ=78.09;MQ0=0;MQRankSum=0.137;QD=44.14;ReadPosRankSum=0.823;VQSLOD=4.0939;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,1781	0/0:10,0:10:30.10:0,30,419	0/0:9,0:9:27.02:0,27,328	0/0:19,0:19:57.15:0,57,734	0/0:36,0:36:99:0,108,1495	0/0:31,0:31:90.28:0,90,1239	0/0:23,0:23:69.23:0,69,964	0/0:42,0:42:99:0,120,1663	0/0:18,0:18:54.18:0,54,755	0/0:34,0:34:96.32:0,96,1343	0/0:22,0:22:66.21:0,66,906	1/1:0,22:22:60.20:959,60,0	1/1:0,24:23:66.23:1055,66,0	0/0:28,0:28:78.24:0,78,1072	0/0:23,0:23:69.23:0,69,965	0/0:21,0:21:63.21:0,63,881	0/0:22,0:22:63.21:0,63,879	0/0:9,0:9:24.06:0,24,317	0/0:25,0:25:69.23:0,69,951	0/0:38,0:38:99:0,114,1578	0/0:13,0:13:39.11:0,39,527	1/1:0,21:22:63.21:1006,63,0	1/1:0,20:20:53.94:863,54,0	1/1:0,13:13:36.12:575,36,0	0/0:22,0:22:66.22:0,66,923	0/0:26,0:26:75.25:0,75,1049	0/0:20,0:20:57.16:0,57,776	0/0:12,0:12:36.09:0,36,468
chr10	73399061	.	C	CAAA	2584.18	PASS	AB=0.804;AC=19;AF=0.339;AN=56;BaseQRankSum=3.667;DP=502;FS=5.716;HRun=15;HaplotypeScore=99.5201;InbreedingCoeff=0.7257;MQ=66.05;MQ0=12;MQRankSum=-2.958;QD=13.18;ReadPosRankSum=-5.417;VQSLOD=0.2467;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:30:22.34:0,22,402	0/0:5,0:6:10.38:0,10,103	0/0:20,0:12:24.39:0,24,226	0/1:15,0:8:7.93:8,0,20	0/0:24,0:27:39.47:0,39,374	0/0:11,0:13:29.73:0,30,270	0/0:18,0:17:10.44:0,10,254	0/0:19,0:21:9.34:0,9,228	0/0:11,0:13:18.83:0,19,179	1/1:7,7:25:47.14:559,47,0	1/1:5,10:21:40.17:452,40,0	1/1:14,10:25:30.66:399,31,0	1/1:6,8:15:6:74,6,0	0/0:15,0:16:13.89:0,14,134	0/0:13,0:14:15.98:0,16,162	0/0:10,0:15:26.33:0,26,240	0/0:18,0:21:43.19:0,43,427	1/1:7,0:6:15.05:229,15,0	0/0:18,0:19:30.86:0,31,295	0/0:13,0:15:3.55:0,4,188	0/0:7,0:9:7.12:0,7,66	1/1:11,10:23:27.03:380,27,0	1/1:4,14:23:26.33:351,26,0	1/1:3,8:12:9.29:109,9,0	0/1:6,2:19:8.46:219,0,8	0/0:19,0:19:17.33:0,17,165	0/0:23,0:26:17.05:0,17,301	0/1:7,0:6:0.15:0,0,24
chr10	73399764	.	CT	C	2775.35	PASS	AB=0.917;AC=20;AF=0.357;AN=56;BaseQRankSum=9.943;DP=596;FS=0.770;HRun=11;HaplotypeScore=63.2856;InbreedingCoeff=0.8272;MQ=66.38;MQ0=1;MQRankSum=2.262;QD=14.02;ReadPosRankSum=0.584;VQSLOD=3.8247;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,1:40:62.50:0,63,832	0/0:9,0:9:27.07:0,27,288	0/1:22,1:17:16.40:16,0,148	0/1:12,2:12:64.38:64,0,68	0/0:30,0:30:63.16:0,63,672	0/0:24,0:24:69.17:0,69,736	0/0:17,0:17:14.45:0,14,358	0/0:22,4:27:7.67:0,8,459	0/0:15,1:16:14.44:0,14,351	1/1:3,16:19:48.39:392,48,0	1/1:2,17:19:47.93:394,48,0	1/1:3,11:14:26.95:222,27,0	1/1:2,17:19:49.98:399,50,0	0/0:17,0:17:24.06:0,24,256	0/0:19,0:19:39.22:0,39,464	0/0:21,0:22:50.95:0,51,518	0/0:30,2:34:34.59:0,35,736	1/1:2,13:15:26.97:222,27,0	0/0:28,2:30:16.83:0,17,557	0/0:25,3:29:41.33:0,41,615	0/0:10,0:10:24.06:0,24,256	1/1:4,13:17:38.94:320,39,0	1/1:5,18:23:38.58:319,39,0	1/1:4,13:17:35.94:296,36,0	1/1:2,16:18:23.80:345,24,0	0/0:25,1:28:39.06:0,39,574	0/0:25,1:27:37.86:0,38,583	0/0:18,0:19:50.94:0,51,517
chr10	73400496	.	AAAAAT	A	1402.56	PASS	AB=1.000;AC=8;AF=0.154;AN=52;BaseQRankSum=4.168;DP=236;FS=3.462;HRun=0;HaplotypeScore=50.9752;InbreedingCoeff=0.5230;MQ=76.76;MQ0=3;MQRankSum=-1.370;QD=25.50;ReadPosRankSum=3.155;VQSLOD=3.0715;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:10.89:0,11,114	0/0:1,0:1:3.01:0,3,92	0/0:14,0:8:20.36:0,20,203	0/1:17,0:6:9.18:9,0,30	0/0:9,0:9:27.07:0,27,506	0/0:13,0:13:39.12:0,39,1088	0/1:3,0:3:17.23:17,0,166	0/0:33,0:33:90.25:0,90,2035	0/0:1,0:1:3.01:0,3,52	1/1:5,7:12:36.11:576,36,0	1/1:1,6:6:18.02:308,18,0	0/0:5,0:5:15.05:0,15,269	0/0:4,0:4:9.02:0,9,167	0/0:4,0:4:9.03:0,9,161	0/0:3,0:3:9.02:0,9,169	0/0:4,0:4:12.04:0,12,307	0/0:12,0:12:36.11:0,36,859	0/0:11,0:11:21.73:0,22,165	0/0:21,0:21:59.85:0,60,1246	0/0:5,0:5:15.05:0,15,317	./.	0/0:1,0:1:3.01:0,3,91	./.	0/0:1,0:1:3.01:0,3,56	1/1:0,16:16:33.11:638,33,0	0/0:12,0:12:33.09:0,33,803	0/0:7,0:7:21.04:0,21,386	0/0:11,0:11:33.10:0,33,800
chr10	73401156	.	T	TA	1269.66	PASS	AB=0.923;AC=10;AF=0.185;AN=54;BaseQRankSum=2.456;DP=334;FS=4.816;HRun=9;HaplotypeScore=40.4919;InbreedingCoeff=0.6820;MQ=63.73;MQ0=7;MQRankSum=0.096;QD=13.36;ReadPosRankSum=0.251;VQSLOD=2.7251;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:32.92:0,33,274	0/0:4,0:4:12:0,12,104	0/0:13,0:8:20.93:0,21,166	0/0:10,0:8:2.93:0,3,64	0/0:14,0:14:35.96:0,36,308	0/0:22,0:21:50.70:0,51,440	0/0:4,0:3:6:0,6,52	0/0:38,0:32:71.92:0,72,620	0/0:6,0:6:15:0,15,130	1/1:2,16:17:45.12:498,45,0	1/1:3,11:13:32.92:346,33,0	0/0:3,0:3:9:0,9,78	0/0:7,0:6:11.99:0,12,102	0/0:5,0:5:11.72:0,12,104	0/1:12,1:13:3.19:3,0,204	0/1:10,1:11:0.19:0,0,227	0/0:15,0:15:19.27:0,19,293	1/1:12,0:17:28.52:146,29,0	0/0:16,0:14:29.97:0,30,260	0/0:9,0:9:12:0,12,104	0/0:3,0:2:3:0,3,26	0/0:5,0:5:11.97:0,12,101	0/0:3,0:3:5.98:0,6,48	./.	1/1:2,14:16:39.11:431,39,0	0/0:22,0:21:56.97:0,57,491	0/0:14,0:14:32.98:0,33,286	0/0:9,0:9:20.98:0,21,182
chr10	73401767	.	C	CGAG	2634.70	PASS	AB=0.645;AC=3;AF=0.054;AN=56;BaseQRankSum=9.987;DP=701;FS=0.576;HRun=0;HaplotypeScore=118.7886;InbreedingCoeff=-0.0568;MQ=68.64;MQ0=2;MQRankSum=-9.652;QD=31.37;ReadPosRankSum=-0.375;VQSLOD=3.8438;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:64:99:0,178,3116	0/0:11,0:11:30.10:0,30,528	0/0:16,0:11:30.09:0,30,466	0/0:32,0:27:67.44:0,67,1105	0/0:24,0:24:60.10:0,60,994	0/0:24,0:23:69.24:0,69,1217	0/0:22,0:22:63.16:0,63,1026	0/0:44,0:44:99:0,114,1948	0/0:27,0:27:78.26:0,78,1345	0/1:21,16:36:99:1124,0,669	0/1:9,16:25:99:831,0,210	0/0:29,0:29:84.27:0,84,1420	0/0:26,0:26:72.21:0,72,1211	0/0:18,0:18:48.15:0,48,821	0/0:30,0:30:84.29:0,84,1482	0/0:23,0:23:66.18:0,66,1079	0/0:29,0:29:87.30:0,87,1533	0/0:20,0:20:39.31:0,39,975	0/0:12,0:10:30.10:0,30,529	0/0:17,0:17:48.16:0,48,828	0/0:22,0:21:60.68:0,61,1059	0/0:8,0:8:24.08:0,24,423	0/0:17,0:17:39.13:0,39,687	0/0:29,0:29:87.28:0,87,1505	0/1:9,12:22:99:780,0,213	0/0:25,0:25:66.22:0,66,1133	0/0:36,0:36:99:0,108,1847	0/0:12,0:12:36.12:0,36,635
chr10	73401791	.	TTA	T	617.52	PASS	AB=0.713;AC=3;AF=0.056;AN=54;BaseQRankSum=7.217;DP=622;FS=10.310;HRun=0;HaplotypeScore=90.0913;InbreedingCoeff=-0.0592;MQ=54.94;MQ0=7;MQRankSum=-6.765;QD=11.44;ReadPosRankSum=2.565;VQSLOD=2.8976;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,163,3275	0/0:12,0:12:36.12:0,36,731	./.	0/0:11,0:6:18.06:0,18,278	0/0:19,0:19:51.17:0,51,1010	0/0:27,0:27:81.28:0,81,1612	0/0:23,0:23:63.21:0,63,1217	0/0:42,0:42:99:0,123,2389	0/0:22,0:22:66.23:0,66,1319	0/1:17,8:24:99:312,0,903	0/1:9,6:15:99:198,0,370	0/0:18,0:18:54.17:0,54,1025	0/0:24,0:24:72.23:0,72,1427	0/0:13,0:13:36.12:0,36,732	0/0:31,0:31:90.27:0,90,1769	0/0:18,0:18:50.86:0,51,1008	0/0:30,0:30:90.31:0,90,1773	0/0:19,0:19:54.18:0,54,1070	0/0:17,0:13:36.12:0,36,731	0/0:16,0:16:48.16:0,48,960	0/0:32,0:27:72.25:0,72,1450	0/0:10,0:10:30.09:0,30,568	0/0:14,0:14:36.12:0,36,722	0/0:30,0:30:90.31:0,90,1805	0/1:7,7:14:99:208,0,284	0/0:25,0:25:75.26:0,75,1504	0/0:36,0:36:99:0,108,2172	0/0:15,0:15:45.11:0,45,780
chr10	73401950	.	TA	T	1307.55	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.622;DP=475;FS=5.142;HRun=9;HaplotypeScore=46.4564;InbreedingCoeff=0.9581;MQ=58.72;MQ0=1;MQRankSum=1.329;QD=20.43;ReadPosRankSum=1.933;VQSLOD=4.2231;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:26:72.21:0,72,831	0/0:8,0:8:18.04:0,18,198	0/0:11,0:8:9.04:0,9,97	0/0:5,0:2:6:0,6,54	0/0:24,0:24:69.19:0,69,787	0/0:28,0:28:72.20:0,72,821	0/0:20,0:20:57.17:0,57,652	0/0:25,0:25:63.17:0,63,715	0/0:13,0:13:33.09:0,33,368	0/0:18,0:18:47.99:0,48,518	0/0:13,0:13:37.34:0,37,409	1/1:0,14:14:42.02:384,42,0	1/1:1,15:16:42:384,42,0	0/0:14,0:14:39.11:0,39,447	0/0:19,0:19:48.12:0,48,535	0/0:13,0:13:36.11:0,36,415	0/0:29,0:29:72.20:0,72,819	0/0:12,0:12:24.07:0,24,277	0/0:22,0:22:51.14:0,51,578	0/0:16,0:16:45.12:0,45,509	0/0:13,0:13:36.08:0,36,393	1/1:0,10:10:30.02:274,30,0	1/1:3,11:14:30.01:275,30,0	1/1:2,7:10:18:165,18,0	0/0:19,0:19:54.16:0,54,622	0/0:20,0:20:51.14:0,51,579	0/0:32,0:32:84.21:0,84,938	0/0:11,0:11:27.08:0,27,312
chr10	73402221	.	G	GAGA	5052.80	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-11.260;DP=579;FS=4.153;HRun=0;HaplotypeScore=80.7980;InbreedingCoeff=0.9908;MQ=84.66;MQ0=0;MQRankSum=-2.709;QD=51.04;ReadPosRankSum=4.077;VQSLOD=6.7192;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.20:0,69,1059	0/0:9,0:9:24.08:0,24,381	0/0:19,0:19:45.15:0,45,723	0/0:25,0:25:60.17:0,60,897	0/0:24,0:24:63.22:0,63,1026	0/0:27,0:27:78.25:0,78,1238	0/0:9,0:9:24.08:0,24,392	0/0:26,0:26:75.25:0,75,1202	0/0:26,0:26:72.24:0,72,1148	0/0:21,0:21:54.18:0,54,859	0/0:20,0:20:54.18:0,54,870	1/1:4,19:23:54.19:1206,54,0	1/1:5,11:17:21.07:469,21,0	0/0:20,0:20:57.19:0,57,925	0/0:18,0:18:51.17:0,51,833	0/0:28,0:28:78.27:0,78,1258	0/0:21,0:21:54.18:0,54,878	0/0:18,0:18:31.35:0,31,493	0/0:16,0:16:42.14:0,42,682	0/0:25,0:25:60.19:0,60,957	0/0:4,0:4:12.04:0,12,196	1/1:1,13:14:39.13:854,39,0	1/1:1,30:32:81.28:1799,81,0	1/1:0,13:13:33.11:725,33,0	0/0:15,0:15:45.12:0,45,667	0/0:29,0:29:81.28:0,81,1312	0/0:34,0:34:96.33:0,96,1557	0/0:22,0:22:63.18:0,63,974
chr10	73403048	.	T	TACACAC	1835.14	PASS	AB=0.827;AC=18;AF=0.321;AN=56;BaseQRankSum=5.955;DP=548;FS=0.000;HRun=0;HaplotypeScore=136.3370;InbreedingCoeff=0.7283;MQ=63.35;MQ0=13;MQRankSum=-3.009;QD=8.91;ReadPosRankSum=-3.231;VQSLOD=1.7423;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,11:22:3.01:52,3,0	0/0:6,0:6:18.06:0,18,380	0/1:28,0:14:15.49:15,0,308	0/0:31,0:18:15.68:0,16,264	0/0:19,0:19:33.11:0,33,695	0/0:15,0:15:27.55:0,28,512	0/0:24,0:23:51.06:0,51,924	0/0:23,0:23:27.09:0,27,548	0/0:20,0:20:45.15:0,45,941	1/1:22,0:32:54.66:1227,55,0	1/1:19,0:19:17.78:393,18,0	1/1:15,0:15:5.75:63,6,0	1/1:8,0:8:9.03:171,9,0	0/0:18,0:18:42.11:0,42,802	0/0:23,0:23:48.13:0,48,927	0/0:10,0:10:18.06:0,18,379	0/0:23,0:23:17.06:0,17,764	0/0:11,0:11:21.07:0,21,343	0/0:16,0:16:30.07:0,30,559	0/0:19,0:19:32.86:0,33,667	0/0:26,0:26:41.19:0,41,827	1/1:22,0:22:3.01:58,3,0	1/1:19,0:16:2.99:24,3,0	1/1:14,0:20:0.21:0,0,0	0/1:8,0:16:0:0,0,0	0/0:24,0:24:51.13:0,51,1038	0/0:25,0:25:56.97:0,57,991	0/0:9,0:9:21.02:0,21,429
chr10	73403066	.	CAGAGAGAG	C	1257.35	PASS	AB=0.967;AC=17;AF=0.315;AN=54;BaseQRankSum=3.324;DP=526;FS=18.530;HRun=0;HaplotypeScore=133.4000;InbreedingCoeff=0.5518;MQ=48.75;MQ0=15;MQRankSum=1.355;QD=6.42;ReadPosRankSum=-0.517;VQSLOD=1.2992;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:3.01:0,3,46	0/0:7,0:7:9.03:0,9,301	./.	0/0:21,0:8:0.47:0,0,1	0/0:20,0:20:18.06:0,18,617	0/1:19,0:19:15.05:15,0,514	0/0:28,0:27:12.51:0,13,355	0/0:18,0:18:6.49:0,6,81	0/0:21,0:20:21.07:0,21,541	0/0:24,0:23:31.04:0,31,897	0/0:16,0:16:5.91:0,6,84	1/1:11,0:12:3.01:67,3,0	0/0:6,0:6:0.47:0,0,1	0/0:20,0:20:15.94:0,16,489	0/0:28,0:28:33.11:0,33,1080	0/0:8,0:8:6.02:0,6,214	0/0:25,0:25:24.88:0,25,566	0/0:14,0:14:10.57:0,11,247	1/1:15,0:18:6.09:202,6,0	1/1:13,7:21:3.01:75,3,0	1/1:24,0:24:9.02:223,9,0	0/0:16,0:17:2.89:0,3,26	0/1:16,0:15:0:0,0,0	0/1:17,0:15:0:0,0,0	0/0:14,0:13:3.01:0,3,99	1/1:18,8:26:21.14:520,21,0	1/1:24,2:30:11.63:257,12,0	1/1:11,0:11:2.96:53,3,0
chr10	73404737	.	CT	C	1544.01	PASS	AB=0.865;AC=25;AF=0.446;AN=56;BaseQRankSum=8.941;DP=475;FS=0.000;HRun=13;HaplotypeScore=50.0553;InbreedingCoeff=0.3313;MQ=57.83;MQ0=13;MQRankSum=0.661;QD=5.53;ReadPosRankSum=1.821;VQSLOD=1.4483;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,5:27:45.42:45,0,377	0/1:6,1:7:6.90:7,0,97	1/1:10,0:4:2.72:13,3,0	0/0:10,0:8:2.66:0,3,45	0/1:21,2:23:1.87:2,0,279	0/0:20,1:23:24.97:0,25,395	0/0:10,0:10:14.18:0,14,169	0/0:21,0:22:27.13:0,27,252	0/0:11,1:12:5.12:0,5,207	0/1:8,10:18:2.82:182,0,3	1/1:6,12:20:36.83:252,37,0	1/1:4,11:14:23.84:174,24,0	1/1:2,8:10:17.89:131,18,0	0/1:8,0:8:13.54:14,0,74	0/0:17,0:16:10.25:0,10,243	0/1:13,3:16:43.80:44,0,97	0/0:24,1:24:23.15:0,23,382	0/1:14,2:16:13.77:14,0,203	0/1:16,1:16:3.85:4,0,128	0/0:21,2:22:17.26:0,17,319	0/0:14,0:14:33.02:0,33,312	1/1:4,4:9:13.95:93,14,0	1/1:7,18:25:23.59:327,24,0	1/1:0,11:11:29.83:219,30,0	1/1:14,8:22:4.88:192,5,0	0/1:19,2:19:16.78:17,0,177	0/0:27,0:26:36.06:0,36,350	0/0:7,0:8:8.07:0,8,105
chr10	73405322	.	A	AGTATGTAT	1801.68	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-3.411;DP=483;FS=0.814;HRun=0;HaplotypeScore=122.4180;InbreedingCoeff=0.8899;MQ=73.32;MQ0=0;MQRankSum=-4.997;QD=24.68;ReadPosRankSum=-1.922;VQSLOD=2.5661;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:45.13:0,45,970	0/0:7,0:7:15.05:0,15,338	0/0:16,0:14:21.94:0,22,326	0/0:17,0:17:18.06:0,18,336	0/0:15,0:15:36.05:0,36,749	0/0:24,0:24:66.22:0,66,1515	0/0:6,0:6:6.01:0,6,81	0/0:27,0:27:45.15:0,45,900	0/0:10,0:10:27.08:0,27,593	0/0:19,0:19:45.15:0,45,1029	0/0:19,0:19:45.14:0,45,1021	1/1:2,15:17:24.08:978,24,0	1/1:9,7:18:15.05:595,15,0	0/0:9,0:9:15.05:0,15,366	0/0:27,0:27:69.22:0,69,1550	0/0:17,0:17:39.11:0,39,793	0/0:30,0:30:56.23:0,56,1592	0/0:10,0:10:15.05:0,15,302	0/0:21,0:21:42.12:0,42,822	0/0:21,0:21:27.09:0,27,621	0/0:11,0:11:19.31:0,19,445	1/1:6,7:15:9.02:99,9,0	1/1:4,11:17:5.85:214,6,0	1/1:6,0:6:6:73,6,0	0/0:16,0:16:39.12:0,39,840	0/0:16,0:16:42.14:0,42,968	0/0:36,0:35:21.78:0,22,1705	0/0:13,0:13:30.10:0,30,753
chr10	73406083	.	TTTTTTA	T	1047.19	PASS	AB=0.556;AC=9;AF=0.161;AN=56;BaseQRankSum=7.122;DP=490;FS=17.863;HRun=0;HaplotypeScore=94.9514;InbreedingCoeff=0.8684;MQ=67.89;MQ0=7;MQRankSum=-5.777;QD=18.05;ReadPosRankSum=3.913;VQSLOD=1.8436;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:69.19:0,69,1202	0/0:4,0:4:12.03:0,12,275	0/0:46,0:14:27.24:0,27,299	0/0:23,0:8:18.03:0,18,233	0/0:16,0:16:45.13:0,45,1110	0/0:21,0:21:63.19:0,63,1356	0/0:22,0:22:63.17:0,63,1190	0/0:31,0:31:88.10:0,88,1972	0/0:16,0:16:45.13:0,45,1042	0/0:12,0:12:32.71:0,33,404	0/0:13,0:13:39.03:0,39,490	1/1:3,10:13:14.66:255,15,0	1/1:1,10:11:12.04:223,12,0	0/0:9,0:9:24.08:0,24,557	0/0:16,0:16:48.12:0,48,1006	0/0:12,0:12:36.09:0,36,807	0/0:27,0:27:81.22:0,81,1865	0/0:29,0:29:65.93:0,66,1178	0/0:15,0:15:45.14:0,45,1125	0/0:13,0:13:36.12:0,36,904	0/0:10,0:10:24.51:0,25,376	1/1:1,7:8:17.89:256,18,0	1/1:2,9:11:14.14:258,14,0	0/1:3,12:15:5.41:215,0,5	0/0:22,0:22:45.05:0,45,636	0/0:15,0:14:37.76:0,38,701	0/0:23,0:23:66.23:0,66,1726	0/0:12,0:12:27.08:0,27,625
chr10	73406314	.	CGAT	C	91.14	PASS	AB=0.827;AC=4;AF=0.071;AN=56;BaseQRankSum=3.800;DP=324;FS=33.917;HRun=0;HaplotypeScore=57.0795;InbreedingCoeff=-0.0926;MQ=76.34;MQ0=0;MQRankSum=-4.109;QD=2.60;ReadPosRankSum=-1.521;VQSLOD=-0.5041;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.18:0,51,1249	0/0:3,0:3:9.03:0,9,221	0/0:8,0:8:23.97:0,24,503	0/0:10,0:10:29.78:0,30,617	0/0:3,0:3:9.03:0,9,221	0/0:7,0:7:21.07:0,21,476	0/0:22,2:24:13.09:0,13,1515	0/0:11,0:11:33.11:0,33,810	0/0:15,1:16:39.13:0,39,921	0/0:3,0:3:9.02:0,9,176	0/0:6,0:6:18.06:0,18,438	0/0:10,1:11:27.09:0,27,659	0/0:4,1:5:11.77:0,12,289	0/1:4,2:6:36.61:37,0,278	0/0:10,0:10:30.10:0,30,739	0/0:4,0:4:12.03:0,12,246	0/0:19,0:18:54.17:0,54,1259	0/0:13,0:13:36.12:0,36,871	0/0:13,0:13:39.13:0,39,918	0/1:6,1:7:13.56:14,0,395	0/0:63,0:63:99:0,184,4455	0/0:5,1:6:8.95:0,9,194	0/0:5,0:5:15.05:0,15,370	0/0:16,0:16:45.15:0,45,1107	0/1:4,1:5:40.57:41,0,230	0/1:14,3:17:99:108,0,815	0/0:10,2:12:27.56:0,28,663	0/0:3,0:3:9.03:0,9,222
chr10	73406619	.	GC	G	318.87	PASS	AB=0.929;AC=4;AF=0.077;AN=52;BaseQRankSum=3.853;DP=275;FS=4.262;HRun=8;HaplotypeScore=38.6094;InbreedingCoeff=0.2726;MQ=75.79;MQ0=1;MQRankSum=0.139;QD=7.97;ReadPosRankSum=1.800;VQSLOD=0.1896;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:42.07:405,42,0	0/0:1,0:1:3.01:0,3,36	0/0:8,0:7:2.44:0,2,67	0/1:20,0:19:2.06:2,0,276	0/0:2,0:2:6.02:0,6,72	0/0:1,0:1:3.01:0,3,36	0/0:40,0:41:99:0,111,1259	0/0:2,0:2:0.89:0,1,2	0/0:9,0:9:18.04:0,18,205	0/0:3,0:3:6.01:0,6,63	0/0:2,0:2:3.01:0,3,36	0/0:4,0:4:8.97:0,9,92	0/0:6,0:6:15.03:0,15,168	0/0:6,0:6:15:0,15,165	0/0:4,0:4:9.03:0,9,109	./.	0/0:31,0:31:79.13:0,79,925	0/0:26,0:26:75.17:0,75,875	0/1:5,1:6:13.92:14,0,130	./.	0/0:33,0:34:72.03:0,72,798	0/0:8,0:8:18.06:0,18,217	0/0:3,0:3:9.03:0,9,108	0/0:22,0:22:54.12:0,54,612	0/0:7,0:7:18.05:0,18,216	0/0:8,0:8:21.06:0,21,254	0/0:3,0:3:9:0,9,86	0/0:3,0:3:9.01:0,9,96
chr10	73407240	.	T	TCTC	6184.88	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.173;DP=559;FS=15.749;HRun=0;HaplotypeScore=76.3621;InbreedingCoeff=0.9727;MQ=78.47;MQ0=0;MQRankSum=-4.332;QD=56.74;ReadPosRankSum=3.061;VQSLOD=6.0849;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1753	0/0:3,0:3:9.03:0,9,154	0/0:17,0:17:51.15:0,51,840	0/0:14,0:14:33.08:0,33,532	0/0:20,0:20:51.12:0,51,870	0/0:13,0:13:39.11:0,39,615	0/0:24,0:24:69.22:0,69,1147	0/0:24,0:24:63.22:0,63,1075	0/0:15,0:15:39.11:0,39,615	0/0:20,0:20:57.20:0,57,971	0/0:16,0:16:42.13:0,42,691	1/1:3,27:30:81.28:1833,81,0	1/1:1,30:32:84.29:1934,84,0	0/0:20,0:20:60.20:0,60,998	0/0:26,0:26:75.26:0,75,1279	0/0:20,0:20:57.19:0,57,969	0/0:28,0:28:84.23:0,84,1362	0/0:27,0:27:78.15:0,78,1208	0/0:14,0:14:41.33:0,41,623	0/0:10,0:10:30.10:0,30,512	0/0:42,0:42:99:0,123,1955	1/1:0,8:8:24.08:552,24,0	1/1:0,18:19:45.15:1037,45,0	1/1:1,18:20:35.42:829,35,0	0/0:15,0:15:42.13:0,42,691	0/0:21,0:21:63.21:0,63,1050	0/0:21,0:19:63.17:0,63,1008	0/0:5,0:5:9.03:0,9,152
chr10	73407490	.	AAT	A	3850.13	PASS	AB=0.913;AC=22;AF=0.393;AN=56;BaseQRankSum=14.093;DP=507;FS=11.346;HRun=0;HaplotypeScore=72.1155;InbreedingCoeff=0.8085;MQ=73.27;MQ0=4;MQRankSum=-0.699;QD=15.71;ReadPosRankSum=2.546;VQSLOD=2.5605;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,23:28:60.15:727,60,0	0/0:5,0:5:12.04:0,12,195	0/0:11,0:11:5.32:0,5,29	0/0:9,0:8:7.53:0,8,57	0/0:21,1:22:19.98:0,20,809	0/0:27,0:27:72.25:0,72,1172	0/0:5,0:5:9.03:0,9,148	0/0:35,1:35:47.08:0,47,1276	0/0:13,0:13:39.13:0,39,639	1/1:5,24:29:72.23:891,72,0	1/1:4,8:12:4.77:309,5,0	1/1:4,0:27:38.18:185,38,0	1/1:1,0:22:48.29:238,48,0	0/0:10,0:10:24.07:0,24,354	0/0:17,1:18:7.94:0,8,652	0/0:16,0:16:36.12:0,36,588	0/1:15,1:15:1.08:1,0,505	1/1:4,15:19:45.14:557,45,0	0/0:21,0:20:42.14:0,42,658	0/0:19,0:19:48.16:0,48,774	0/0:12,0:12:24.08:0,24,390	1/1:4,0:15:25.47:124,25,0	1/1:8,0:25:40.92:196,41,0	1/1:2,0:12:19.89:98,20,0	1/1:0,14:14:39.12:483,39,0	0/1:20,3:23:41.33:41,0,912	0/0:30,0:30:75.24:0,75,1198	0/0:8,0:8:15.05:0,15,246
chr10	73407954	.	TC	T	2549.35	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.332;DP=524;FS=0.992;HRun=2;HaplotypeScore=61.1033;InbreedingCoeff=0.9803;MQ=76.44;MQ0=0;MQRankSum=0.500;QD=33.54;ReadPosRankSum=2.198;VQSLOD=3.7904;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1570	0/0:6,0:6:18.05:0,18,250	0/0:13,0:13:32.87:0,33,394	0/0:8,0:8:7.97:0,8,195	0/0:29,0:29:87.02:0,87,1247	0/0:24,0:24:72.22:0,72,1038	0/0:14,0:14:42.11:0,42,589	0/0:33,0:33:99:0,99,1445	0/0:19,0:19:57.19:0,57,853	0/0:26,0:26:78.25:0,78,1134	0/0:16,0:16:45.14:0,45,653	1/1:0,10:10:24.08:311,24,0	1/1:0,15:15:45.15:584,45,0	0/0:17,0:17:48.16:0,48,717	0/0:17,0:17:48.16:0,48,719	0/0:15,0:15:45.12:0,45,634	0/0:28,0:28:84.28:0,84,1249	0/0:9,0:9:27.09:0,27,399	0/0:15,0:15:42.13:0,42,609	0/0:34,0:34:99:0,102,1486	0/0:12,0:12:36.12:0,36,539	1/1:0,17:17:48.16:622,48,0	1/1:0,19:20:51.16:662,51,0	1/1:0,14:14:42.14:545,42,0	0/0:23,0:23:69.18:0,69,939	0/0:25,0:25:69.23:0,69,1016	0/0:20,0:19:60.14:0,60,844	0/0:8,0:8:24.06:0,24,337
chr10	73408036	.	GA	G	633.81	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.674;DP=604;FS=3.412;HRun=9;HaplotypeScore=66.8970;InbreedingCoeff=0.9833;MQ=79.09;MQ0=0;MQRankSum=-2.909;QD=17.61;ReadPosRankSum=2.260;VQSLOD=4.0788;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,32:36:23.82:727,24,0	0/0:12,0:12:33.10:0,33,378	0/0:25,0:25:47.50:0,48,521	0/0:12,0:12:26.43:0,26,275	0/0:31,0:33:86.92:0,87,958	0/0:18,0:18:51.14:0,51,580	0/0:12,0:12:24.07:0,24,277	0/0:43,0:43:99:0,117,1326	0/0:13,0:13:33.10:0,33,381	0/0:24,0:24:63.17:0,63,715	0/0:31,1:32:62.79:0,63,968	0/0:14,0:14:36.09:0,36,405	0/0:19,0:19:57.17:0,57,658	0/0:17,1:18:20.67:0,21,492	0/0:22,0:22:60.16:0,60,682	0/0:23,0:23:69.19:0,69,787	0/0:29,0:29:72.19:0,72,810	0/0:13,0:13:33.07:0,33,368	0/0:25,0:26:53.99:0,54,603	0/0:37,0:37:99:0,99,1126	0/0:15,0:14:45.13:0,45,519	0/0:13,0:14:35.81:0,36,376	0/0:23,0:23:51.14:0,51,578	0/0:8,0:8:24.07:0,24,277	0/0:21,0:21:57.16:0,57,650	0/0:16,0:16:45.13:0,45,519	0/0:38,0:39:99:0,114,1286	0/0:7,0:7:21.05:0,21,231
chr10	73409336	.	G	GGAGAATGACATAA	29077.96	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-9.543;DP=722;FS=0.000;HRun=0;HaplotypeScore=222.2016;InbreedingCoeff=0.9945;MQ=87.42;MQ0=0;MQRankSum=-18.085;QD=119.66;ReadPosRankSum=2.473;VQSLOD=4.9118;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,5:14:33.11:1427,33,0	0/0:10,0:10:30.10:0,30,1199	0/0:39,0:39:99:0,108,3273	0/0:24,0:24:48.23:0,48,1701	0/0:31,0:31:84.29:0,84,3236	0/0:31,0:31:87.27:0,87,3069	0/0:25,0:25:69.24:0,69,2506	0/0:35,0:35:99:0,99,3477	0/0:29,0:29:84.27:0,84,3254	1/1:10,16:39:93.27:5184,93,0	1/1:4,12:26:39.09:2313,39,0	1/1:2,15:23:51.13:3175,51,0	1/1:6,17:32:69.24:4466,69,0	0/0:24,0:24:69.22:0,69,2551	0/0:36,0:36:99:0,99,3567	0/0:33,0:33:90.31:0,90,3388	0/0:19,0:19:54.17:0,54,1858	1/1:1,3:7:12.04:790,12,0	0/0:21,0:21:60.20:0,60,1923	0/0:30,0:30:84.28:0,84,3110	0/0:26,0:26:69.22:0,69,2274	1/1:5,11:25:45.15:2885,45,0	1/1:4,12:26:51.18:3119,51,0	1/1:4,4:17:21.07:1379,21,0	1/1:4,20:34:66.23:4339,66,0	0/0:17,0:17:48.16:0,48,1776	0/0:40,0:40:99:0,114,4311	0/0:9,0:9:27.09:0,27,1043
chr10	73409936	.	CTT	C	906.57	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.806;DP=629;FS=3.962;HRun=5;HaplotypeScore=68.5139;InbreedingCoeff=0.9965;MQ=75.35;MQ0=2;MQRankSum=-4.917;QD=31.26;ReadPosRankSum=2.720;VQSLOD=3.1116;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:28:72.24:1001,72,0	0/0:10,0:10:30.10:0,30,550	0/0:15,0:15:42.14:0,42,741	0/0:10,0:9:24.08:0,24,428	0/0:29,0:29:84.29:0,84,1540	0/0:23,0:23:66.23:0,66,1205	0/0:18,0:18:54.18:0,54,962	0/0:38,0:38:99:0,105,1787	0/0:22,0:22:66.22:0,66,1167	0/0:34,0:34:99:0,102,1844	0/0:31,0:31:93.31:0,93,1676	0/0:21,0:21:63.22:0,63,1155	0/0:21,0:21:60.21:0,60,1083	0/0:21,0:21:63.22:0,63,1151	0/0:38,0:38:99:0,114,2000	0/0:28,0:28:81.28:0,81,1481	0/0:24,0:24:72.25:0,72,1313	0/0:13,0:13:36.09:0,36,583	0/0:16,0:16:48.15:0,48,839	0/0:27,0:27:81.27:0,81,1447	0/0:10,0:10:30.10:0,30,550	0/0:20,0:20:57.20:0,57,1045	0/0:32,0:32:90.30:0,90,1622	0/0:12,0:12:33.11:0,33,600	0/0:20,0:20:60.21:0,60,1093	0/0:15,0:15:45.15:0,45,822	0/0:35,0:35:99:0,102,1865	0/0:17,0:17:39.13:0,39,715
chr10	73410669	.	ATT	A	1127.59	PASS	AB=0.595;AC=19;AF=0.339;AN=56;BaseQRankSum=5.733;DP=447;FS=6.515;HRun=15;HaplotypeScore=61.8783;InbreedingCoeff=0.8435;MQ=69.01;MQ0=23;MQRankSum=0.952;QD=7.89;ReadPosRankSum=3.965;VQSLOD=0.4780;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,3:24:33.37:33,0,165	0/0:9,0:10:17.54:0,18,199	0/0:16,0:14:17.22:0,17,146	0/0:11,0:8:4.23:0,4,99	0/0:22,0:27:64.03:0,64,682	0/0:15,0:16:38.91:0,39,428	0/0:12,0:13:3:0,3,231	0/0:26,0:29:59.57:0,60,685	0/0:13,0:13:29.96:0,30,342	1/1:5,0:11:13.67:59,14,0	1/1:3,0:10:10.66:45,11,0	1/1:3,4:7:14.98:131,15,0	1/1:2,7:10:20.67:170,21,0	0/0:15,0:15:30.04:0,30,365	0/0:17,0:16:41.55:0,42,495	0/0:8,0:7:20.97:0,21,243	0/0:27,0:28:60.94:0,61,725	1/1:6,0:8:13.70:59,14,0	0/0:19,0:20:50.07:0,50,569	0/0:20,1:21:20.11:0,20,447	0/0:6,0:7:14.45:0,14,119	1/1:3,14:16:32.74:312,33,0	1/1:5,12:18:32.39:261,32,0	1/1:4,6:9:11.85:150,12,0	1/1:6,0:22:27.15:115,27,0	0/0:20,0:21:29.54:0,30,446	0/0:10,0:11:20.96:0,21,217	0/0:8,0:7:18.06:0,18,244
chr10	73412777	.	T	TGG	1060.84	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=1.161;DP=425;FS=3.415;HRun=8;HaplotypeScore=64.0669;InbreedingCoeff=0.9134;MQ=85.40;MQ0=1;MQRankSum=-3.816;QD=14.73;ReadPosRankSum=-1.464;VQSLOD=0.5897;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:9,17:25:36.31:559,36,0	0/0:8,0:8:21.05:0,21,233	0/0:22,0:21:32.20:0,32,383	0/0:24,0:23:32.65:0,33,311	0/0:18,0:18:48.12:0,48,534	0/0:13,0:13:36.09:0,36,401	0/0:13,0:13:33.08:0,33,367	0/0:21,0:21:42.08:0,42,459	0/0:12,0:12:33.07:0,33,360	1/1:6,4:11:17.42:238,17,0	1/1:4,6:10:9.03:143,9,0	0/0:17,0:17:42.09:0,42,460	0/0:10,0:10:30.07:0,30,325	0/0:20,0:20:44.81:0,45,496	0/0:11,0:11:33.05:0,33,343	0/0:12,0:12:27.03:0,27,292	0/0:19,0:19:48.09:0,48,526	1/1:2,0:9:15.66:62,16,0	0/0:14,0:14:30.07:0,30,334	0/0:12,0:12:24.05:0,24,267	0/0:16,0:16:39.09:0,39,435	0/0:7,0:7:15.03:0,15,167	0/0:15,0:15:33.08:0,33,367	0/0:8,0:8:1.19:0,1,170	1/1:9,7:16:15.05:227,15,0	0/0:21,0:21:11.65:0,12,554	0/0:28,0:28:75.19:0,75,833	0/0:12,0:12:36.10:0,36,401
chr10	73413493	.	CG	C	386.80	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.030;DP=637;FS=5.249;HRun=4;HaplotypeScore=65.4245;InbreedingCoeff=0.9972;MQ=70.59;MQ0=0;MQRankSum=-1.552;QD=21.49;ReadPosRankSum=1.608;VQSLOD=2.8459;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,1951	0/0:16,0:16:45.13:0,45,608	0/0:27,0:26:69.08:0,69,809	0/0:21,0:21:48.12:0,48,627	0/0:26,0:26:69.23:0,69,949	0/0:15,0:15:43.03:0,43,587	0/0:26,0:26:75.25:0,75,1046	0/0:24,0:24:69.17:0,69,911	0/0:13,0:13:39.06:0,39,488	0/0:19,0:19:54.11:0,54,711	0/0:23,0:23:51.17:0,51,709	0/0:25,0:25:75.19:0,75,967	0/0:25,0:25:69.18:0,69,939	0/0:18,0:18:51.16:0,51,684	0/0:25,0:25:72.20:0,72,942	0/0:27,0:27:72.24:0,72,999	0/0:30,1:31:51.38:0,51,1087	1/1:1,17:18:24.34:480,24,0	0/0:18,0:18:51.09:0,51,672	0/0:29,0:29:87.28:0,87,1197	0/0:15,0:15:45.14:0,45,612	0/0:11,0:11:30.09:0,30,399	0/0:25,0:25:66.22:0,66,920	0/0:28,0:28:81.27:0,81,1128	0/0:19,0:19:57.19:0,57,795	0/0:26,0:26:69.21:0,69,931	0/0:26,0:25:75.25:0,75,1038	0/0:11,0:11:33.11:0,33,461
chr10	73414114	.	AGAGAGAGAGAGAGAGAGAGAGAGC	A	103.37	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=2.142;DP=534;FS=2.764;HRun=0;HaplotypeScore=266.7105;InbreedingCoeff=0.7969;MQ=49.28;MQ0=31;MQRankSum=-0.374;QD=1.46;ReadPosRankSum=-5.108;VQSLOD=1.3332;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:30.07:0,30,996	0/0:7,0:7:18.06:0,18,1256	0/0:22,0:2:3.01:0,3,48	0/0:40,0:6:16.31:0,16,170	0/0:17,0:16:39.13:0,39,2119	0/0:24,0:23:32.34:0,32,1555	0/0:24,0:24:51.90:0,52,2027	0/0:19,0:16:40.29:0,40,886	0/0:20,0:17:30.10:0,30,1838	0/0:17,0:16:36.84:0,37,2534	0/0:14,0:14:23.53:0,24,1355	1/1:13,1:12:4.24:28,4,0	1/1:6,1:7:5.64:66,6,0	0/0:20,0:20:42.86:0,43,1919	0/0:26,0:26:58.10:0,58,3494	0/0:24,0:23:45.86:0,46,3299	0/0:18,0:18:29.19:0,29,1466	0/0:16,0:14:14.88:0,15,623	0/0:16,0:14:38.53:0,39,1234	0/0:19,0:19:33.89:0,34,1407	0/0:23,0:20:40.46:0,40,1588	1/1:16,0:12:6.55:83,7,0	1/1:12,1:13:4.37:49,4,0	1/1:20,1:21:5.85:15,6,0	0/0:24,0:23:30.18:0,30,1638	0/0:18,0:18:48.08:0,48,2316	0/0:24,0:24:65.67:0,66,3089	0/0:11,0:9:18.06:0,18,1023
chr10	73414134	.	AGAGC	A	1993.60	PASS	AB=0.982;AC=26;AF=0.464;AN=56;BaseQRankSum=4.146;DP=607;FS=8.193;HRun=0;HaplotypeScore=141.7524;InbreedingCoeff=0.0884;MQ=60.34;MQ0=27;MQRankSum=-3.239;QD=5.75;ReadPosRankSum=-0.841;VQSLOD=1.3800;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:20.01:154,20,0	0/0:10,0:10:9.92:0,10,141	0/0:48,0:17:38.56:0,39,244	0/0:73,0:25:51.78:0,52,368	0/0:20,0:19:0.05:0,0,315	0/1:22,0:21:29.39:29,0,163	0/0:21,0:21:37.16:0,37,469	0/0:13,0:13:24.66:0,25,172	0/0:21,0:20:19.29:0,19,385	0/1:31,1:31:48.27:425,0,48	0/1:22,0:22:56.06:83,0,56	1/1:7,0:6:6:52,6,0	1/1:8,0:8:20.61:146,21,0	0/1:22,1:23:71.67:75,0,72	0/0:25,0:25:20.34:0,20,625	0/0:29,0:28:9.48:0,9,457	0/1:19,0:19:21.33:21,0,136	1/1:13,0:11:27.53:194,28,0	0/1:15,0:13:46.08:77,0,46	0/1:19,1:20:92.08:92,0,162	0/1:21,0:18:37.31:37,0,118	1/1:19,0:16:16.92:140,17,0	1/1:13,0:13:14.98:125,15,0	1/1:14,0:14:14.19:124,14,0	0/1:26,1:26:4.08:190,0,4	0/1:14,0:14:39.06:39,0,109	0/1:25,0:25:79.21:79,0,117	0/1:13,1:13:86.02:95,0,86
chr10	73414136	.	AGC	A	2471.57	PASS	AB=0.974;AC=30;AF=0.536;AN=56;BaseQRankSum=5.330;DP=610;FS=3.380;HRun=0;HaplotypeScore=124.1895;InbreedingCoeff=0.1326;MQ=60.28;MQ0=27;MQRankSum=-1.013;QD=6.42;ReadPosRankSum=0.301;VQSLOD=3.3066;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:23.19:180,23,0	0/1:10,0:10:4.70:5,0,96	0/0:49,0:17:37.83:0,38,252	0/0:75,0:27:54.67:0,55,375	0/1:20,0:19:31.76:32,0,202	0/1:21,1:21:57.24:57,0,132	0/0:21,0:21:37.03:0,37,374	0/0:15,0:15:30.96:0,31,224	0/0:21,0:20:7.70:0,8,256	1/1:32,1:32:77.03:647,77,0	0/1:21,0:21:5.22:84,0,5	1/1:8,0:7:9:78,9,0	1/1:8,0:8:20.61:146,21,0	0/1:21,1:22:64.69:65,0,133	0/0:25,0:25:19.48:0,19,401	0/1:31,0:30:94.81:95,0,287	0/0:19,0:19:9.43:0,9,121	1/1:13,0:11:28.81:201,29,0	0/1:15,2:15:67.45:153,0,67	0/1:20,0:20:44.95:45,0,123	0/1:20,1:18:76.95:77,0,117	1/1:20,0:17:20.26:167,20,0	1/1:13,0:13:14.98:125,15,0	1/1:14,0:14:14.42:124,14,0	1/1:24,2:25:9.07:163,9,0	0/1:12,1:13:69.82:70,0,78	0/1:24,0:24:85.23:85,0,94	0/1:13,0:12:63.96:64,0,86
chr10	73414152	.	TAC	T	608.45	PASS	AB=0.931;AC=21;AF=0.420;AN=50;BaseQRankSum=7.063;DP=636;FS=8.864;HRun=0;HaplotypeScore=141.9007;InbreedingCoeff=-0.0329;MQ=60.77;MQ0=19;MQRankSum=-0.781;QD=2.00;ReadPosRankSum=-1.349;VQSLOD=1.8631;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:17:5.68:28,6,0	0/1:8,2:10:53.01:53,0,77	./.	./.	0/0:17,0:18:6.87:0,7,188	0/0:22,0:24:27.02:0,27,279	0/1:22,1:23:14.47:14,0,190	0/0:20,0:20:3.01:0,3,41	0/1:15,5:20:17.47:17,0,163	1/1:34,0:34:31.25:153,31,0	./.	1/1:9,0:9:3:27,3,0	0/1:10,0:10:27.56:82,0,28	0/0:19,1:21:19:0,19,424	0/1:24,1:25:11.32:11,0,246	0/0:30,0:30:9.69:0,10,523	0/0:16,0:16:12.04:0,12,178	0/0:13,0:11:2.98:0,3,22	0/1:19,1:19:17.64:18,0,132	0/1:25,3:28:19.59:20,0,234	0/0:13,1:13:1.36:0,1,42	0/1:21,0:21:30.91:66,0,31	1/1:18,0:18:17.85:151,18,0	1/1:19,0:19:8.94:82,9,0	0/1:27,0:27:0:0,0,0	0/1:12,1:13:20.46:20,0,121	0/0:24,1:25:0.60:0,1,382	0/1:8,1:9:17.50:18,0,138
chr10	73414182	.	CACACACACACACACAT	C	1736.63	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=4.005;DP=616;FS=0.000;HRun=0;HaplotypeScore=246.6571;InbreedingCoeff=0.7171;MQ=56.92;MQ0=13;MQRankSum=-0.500;QD=23.79;ReadPosRankSum=-0.369;VQSLOD=2.3824;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:50.92:0,51,1077	0/0:5,0:5:15.05:0,15,1043	0/0:29,0:11:27.35:0,27,343	0/0:40,0:18:46.74:0,47,897	0/0:19,0:19:57.18:0,57,3085	0/0:28,0:28:63.19:0,63,3741	0/0:20,0:20:48.05:0,48,1978	0/0:28,0:28:84.18:0,84,2656	0/0:20,0:20:35.94:0,36,2209	1/1:3,17:20:48.30:1693,48,0	1/1:8,9:17:14.93:114,15,0	0/0:22,0:22:9.14:0,9,334	0/1:12,0:12:55.84:56,0,1068	0/0:26,0:26:72.23:0,72,4491	0/0:21,0:21:54.14:0,54,2915	0/0:31,0:31:90.26:0,90,5469	0/0:14,0:14:31.82:0,32,1771	0/0:13,0:12:29.85:0,30,390	0/0:20,0:19:56.79:0,57,2043	0/0:33,0:33:63.15:0,63,3345	0/0:20,0:19:54.12:0,54,2270	0/0:25,0:25:23.75:0,24,1308	0/0:22,0:22:17.14:0,17,885	0/0:19,0:19:11.62:0,12,630	1/1:2,22:24:0.89:2,1,0	0/0:16,0:16:48.08:0,48,1874	0/0:30,0:30:87.27:0,87,4505	0/0:15,0:15:42.08:0,42,1922
chr10	73414192	.	CACACAT	C	920.32	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=4.617;DP=577;FS=1.323;HRun=0;HaplotypeScore=149.7232;InbreedingCoeff=0.5359;MQ=63.72;MQ0=10;MQRankSum=-1.305;QD=9.59;ReadPosRankSum=0.663;VQSLOD=2.3630;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:42.93:43,0,193	0/0:9,0:9:27.04:0,27,492	0/0:22,0:13:35.87:0,36,325	0/0:27,0:16:38.01:0,38,380	0/0:20,0:20:59.83:0,60,1029	0/0:29,0:29:69.08:0,69,1443	0/0:15,0:15:39.05:0,39,817	0/0:20,0:20:59.86:0,60,670	0/0:22,0:22:38.73:0,39,781	1/1:20,0:20:53.78:718,54,0	1/1:19,0:19:20.81:149,21,0	0/0:26,0:26:7.83:0,8,67	0/1:14,0:14:99:145,0,175	0/0:24,0:24:68.94:0,69,1629	0/0:22,0:22:60.04:0,60,1109	0/0:33,0:33:78.45:0,78,2227	0/0:12,0:12:24.49:0,24,564	0/0:13,0:12:32.81:0,33,278	0/0:14,0:13:38.80:0,39,682	0/0:32,0:32:71.94:0,72,1362	0/0:22,0:21:54:0,54,695	0/0:15,7:22:13.70:0,14,239	0/0:23,0:23:0.13:0,0,100	0/0:19,0:19:11.88:0,12,95	0/1:23,0:23:0:0,0,0	0/0:16,0:16:44.99:0,45,715	0/0:24,0:24:72.11:0,72,1618	0/0:14,0:14:39.04:0,39,744
chr10	73414194	.	CACAT	C	911.92	PASS	AB=0.940;AC=12;AF=0.214;AN=56;BaseQRankSum=7.186;DP=567;FS=1.243;HRun=0;HaplotypeScore=130.9813;InbreedingCoeff=0.6591;MQ=64.19;MQ0=7;MQRankSum=-0.603;QD=5.56;ReadPosRankSum=2.647;VQSLOD=2.7162;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:23.54:0,24,240	0/0:10,0:10:29.97:0,30,370	0/0:21,0:13:35.87:0,36,325	0/0:27,0:16:38:0,38,376	0/0:18,0:18:24.29:0,24,691	0/0:26,0:26:66.04:0,66,1039	0/0:16,0:16:42.02:0,42,649	0/0:22,0:22:65.80:0,66,639	0/0:20,0:20:35.51:0,36,525	1/1:20,0:20:53.77:565,54,0	1/1:20,0:20:23.78:170,24,0	0/1:26,0:26:0.10:1,0,0	0/1:13,1:14:26.97:201,0,27	0/0:25,0:25:50.35:0,50,1167	0/0:19,0:19:53.39:0,53,799	0/0:33,0:33:95.14:0,95,1640	0/0:12,0:12:21.49:0,21,371	0/0:13,0:12:32.81:0,33,272	0/0:15,0:14:38.78:0,39,536	0/0:31,0:31:47.34:0,47,979	0/0:19,0:19:50.83:0,51,468	0/1:15,4:19:44.79:45,0,67	1/1:21,3:24:9.16:76,9,0	1/1:17,1:18:3.45:8,3,0	0/1:23,0:23:0:0,0,0	0/0:17,0:17:50.95:0,51,620	0/0:25,0:25:75.02:0,75,1186	0/0:13,0:13:36.02:0,36,517
chr10	73414196	.	CAT	C	1302.26	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=7.122;DP=533;FS=2.452;HRun=0;HaplotypeScore=109.0601;InbreedingCoeff=0.8970;MQ=65.63;MQ0=7;MQRankSum=-0.159;QD=8.19;ReadPosRankSum=1.012;VQSLOD=3.2708;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:37.04:0,37,267	0/0:9,0:9:9.76:0,10,221	0/0:22,0:14:32.03:0,32,319	0/0:27,0:16:38:0,38,376	0/0:16,0:16:44.50:0,44,504	0/0:25,0:25:56.97:0,57,664	0/0:17,0:17:36.85:0,37,506	0/0:22,0:22:65.82:0,66,600	0/0:16,0:16:21.53:0,22,339	1/1:20,0:20:53.61:411,54,0	1/1:20,0:20:23.78:170,24,0	1/1:0,25:25:2.51:47,3,0	1/1:10,3:13:15.73:313,16,0	0/0:22,0:22:62.69:0,63,796	0/0:17,0:17:42.20:0,42,582	0/0:27,0:27:66.44:0,66,1071	0/0:10,0:10:18.02:0,18,262	0/0:13,0:12:32.81:0,33,264	0/0:14,0:13:33.05:0,33,382	0/0:28,0:28:59.67:0,60,742	0/0:16,0:16:38.94:0,39,351	1/1:13,3:16:9.03:137,9,0	1/1:4,20:24:17.78:266,18,0	1/1:1,17:18:8.96:142,9,0	0/1:23,0:23:0:0,0,0	0/0:17,0:17:44.48:0,44,509	0/0:23,0:23:60.86:0,61,799	0/0:12,0:12:17.23:0,17,312
chr10	73414966	.	A	AC	1962.67	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-6.142;DP=542;FS=5.317;HRun=1;HaplotypeScore=51.5813;InbreedingCoeff=0.8029;MQ=58.56;MQ0=2;MQRankSum=1.493;QD=24.53;ReadPosRankSum=0.037;VQSLOD=3.3053;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,1563	0/0:4,0:4:12.04:0,12,156	0/0:11,0:4:12.04:0,12,155	0/0:18,0:12:30.04:0,30,369	0/0:17,0:17:45.13:0,45,570	0/0:20,0:20:57.19:0,57,740	0/0:22,0:22:60.15:0,60,745	0/0:32,0:31:87.26:0,87,1110	0/0:18,0:18:51.17:0,51,661	1/1:2,13:15:36.12:535,36,0	1/1:1,20:21:51.17:764,51,0	0/0:16,0:16:48.16:0,48,621	0/0:14,0:14:39.11:0,39,492	0/0:20,0:20:48.14:0,48,610	0/0:20,0:20:60.17:0,60,763	0/0:24,0:24:69.22:0,69,896	0/0:30,0:30:68.31:0,68,1108	0/1:26,0:26:48.33:48,0,742	0/0:16,0:14:42.14:0,42,545	0/0:26,0:26:75.24:0,75,971	0/0:23,0:23:66.21:0,66,857	0/0:5,0:5:12.04:0,12,156	0/0:9,0:9:24.08:0,24,312	0/0:27,0:27:78.25:0,78,1012	1/1:0,18:18:51.17:764,51,0	0/0:23,0:23:26.83:0,27,778	0/0:20,0:20:60.20:0,60,779	0/0:4,0:4:12.04:0,12,154
chr10	73415072	.	G	GA	286.13	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.148;DP=600;FS=1.159;HRun=8;HaplotypeScore=63.4444;InbreedingCoeff=0.9828;MQ=85.58;MQ0=0;MQRankSum=-2.280;QD=23.84;ReadPosRankSum=0.446;VQSLOD=4.3069;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.04:0,90,823	0/0:13,0:13:36.02:0,36,329	0/0:22,0:21:35.96:0,36,316	0/0:19,0:19:47.98:0,48,425	0/0:25,0:25:72.04:0,72,659	0/0:23,0:23:69.02:0,69,626	0/0:20,0:20:45.01:0,45,412	0/0:26,0:26:72.01:0,72,648	0/0:25,0:25:69.02:0,69,627	0/0:24,0:24:60.50:0,61,550	0/0:16,0:16:38.98:0,39,348	0/0:32,0:32:93.03:0,93,846	0/0:20,0:20:57.02:0,57,517	0/0:22,0:22:50.98:0,51,459	0/0:20,0:20:54:0,54,485	0/0:37,0:37:99:0,105,961	0/0:26,0:26:75.02:0,75,681	1/1:0,12:12:33.10:381,33,0	0/0:16,0:15:42.01:0,42,381	0/0:29,0:29:81.04:0,81,741	0/0:18,0:18:42:0,42,381	0/0:13,0:13:33.01:0,33,302	0/0:11,0:11:30:0,30,269	0/0:21,0:21:62.99:0,63,568	0/0:21,0:20:56.98:0,57,515	0/0:27,0:27:60.02:0,60,549	0/0:23,0:23:69.04:0,69,631	0/0:5,0:5:14.96:0,15,129
chr10	73417034	.	T	TA	1817.18	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.947;DP=548;FS=17.519;HRun=8;HaplotypeScore=50.9707;InbreedingCoeff=0.9932;MQ=81.02;MQ0=0;MQRankSum=-0.643;QD=23.91;ReadPosRankSum=-1.116;VQSLOD=1.9768;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.02:0,54,494	0/0:11,0:11:27.01:0,27,247	0/0:19,0:19:38.99:0,39,348	0/0:9,0:9:20.13:0,20,166	0/0:26,0:26:72.03:0,72,659	0/0:22,0:22:60.02:0,60,549	0/0:14,0:14:38.99:0,39,350	0/0:29,0:29:75.02:0,75,682	0/0:22,0:22:22.35:0,22,460	1/1:4,19:23:55.41:625,55,0	1/1:1,28:29:69.12:767,69,0	0/0:17,0:17:51.03:0,51,467	0/0:22,0:22:60.02:0,60,549	0/0:16,0:16:42.02:0,42,384	0/0:16,0:16:45.02:0,45,412	0/0:22,0:22:54.03:0,54,494	0/0:32,0:32:81.04:0,81,741	0/0:12,0:12:30.01:0,30,275	0/0:13,0:13:27:0,27,247	0/0:17,0:17:45.02:0,45,412	0/0:13,0:13:39.02:0,39,357	0/0:24,0:24:57.01:0,57,517	0/0:16,0:16:45:0,45,403	0/0:19,0:19:50.98:0,51,459	1/1:2,21:24:50.98:568,51,0	0/0:25,0:25:69.04:0,69,632	0/0:29,0:30:75.03:0,75,686	0/0:6,0:6:18.01:0,18,165
chr10	73418716	.	C	CTT	2947.90	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-6.586;DP=528;FS=0.000;HRun=9;HaplotypeScore=62.3391;InbreedingCoeff=0.8927;MQ=68.12;MQ0=1;MQRankSum=1.291;QD=25.41;ReadPosRankSum=-1.080;VQSLOD=2.8692;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:30:46:658,46,0	0/0:12,0:12:36.09:0,36,383	0/0:12,0:13:23.98:0,24,233	0/0:10,0:9:18.01:0,18,177	0/0:36,0:36:96.19:0,96,1005	0/0:25,0:26:68.87:0,69,698	0/0:9,0:9:27.07:0,27,287	0/0:27,0:27:57.09:0,57,599	0/0:14,0:14:39.07:0,39,405	1/1:2,25:29:76.42:1098,76,0	1/1:6,17:24:50.99:649,51,0	0/0:18,0:18:45.06:0,45,469	0/0:8,0:8:21.05:0,21,223	0/0:16,0:16:45.11:0,45,479	0/0:19,0:19:51.07:0,51,526	0/0:19,0:19:45.10:0,45,479	0/0:25,0:25:63.12:0,63,662	0/1:0,0:8:2.98:3,0,43	0/0:29,0:29:51.26:0,51,649	0/0:30,0:30:87.20:0,87,917	0/0:7,0:7:18.01:0,18,183	0/0:15,0:15:45.11:0,45,479	0/0:14,0:14:36.07:0,36,383	0/0:7,0:7:18.04:0,18,192	1/1:1,20:25:47.65:701,48,0	0/0:21,1:22:13.95:0,14,560	0/0:30,0:30:83.96:0,84,840	0/0:6,0:6:15.04:0,15,160
chr10	73420821	.	G	GAGAT	1394.77	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.104;DP=511;FS=3.014;HRun=0;HaplotypeScore=87.5736;InbreedingCoeff=0.9269;MQ=82.55;MQ0=0;MQRankSum=-3.074;QD=58.12;ReadPosRankSum=0.063;VQSLOD=5.2119;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:24:57.20:1490,57,0	0/0:3,0:3:9.03:0,9,166	0/0:21,0:21:35.12:0,35,782	0/0:11,0:11:32.98:0,33,535	0/0:29,0:29:84.26:0,84,1486	0/0:24,0:24:72.23:0,72,1293	0/0:14,0:14:39.13:0,39,717	0/0:29,0:29:75.24:0,75,1284	0/0:16,0:16:48.16:0,48,882	0/0:27,0:27:78.27:0,78,1435	0/0:21,0:21:51.13:0,51,902	0/0:19,0:19:57.20:0,57,1048	0/0:21,0:21:63.22:0,63,1150	0/0:9,0:9:21.07:0,21,386	0/0:19,0:19:57.20:0,57,1049	0/0:12,0:12:36.12:0,36,660	0/0:31,0:31:84.23:0,84,1478	0/0:19,0:19:45.15:0,45,828	0/0:15,0:15:39.13:0,39,712	0/0:17,0:17:48.16:0,48,873	0/0:17,0:17:51.15:0,51,905	0/0:18,0:18:54.19:0,54,984	0/0:22,0:21:60.12:0,60,1006	0/0:6,0:6:18.06:0,18,331	0/0:16,0:16:45.15:0,45,800	0/0:23,0:22:69.24:0,69,1270	0/0:19,0:19:57.20:0,57,1047	0/0:9,0:9:18.03:0,18,297
chr10	73420881	.	GTAGACAAAGACAAAAT	G	2710.05	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.133;DP=515;FS=0.000;HRun=0;HaplotypeScore=213.7205;InbreedingCoeff=0.9755;MQ=82.00;MQ0=0;MQRankSum=-4.745;QD=50.19;ReadPosRankSum=-1.300;VQSLOD=2.4170;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.25:0,72,4740	0/0:3,0:3:9.03:0,9,548	0/0:16,0:16:42.14:0,42,2181	0/0:16,0:16:48.16:0,48,2857	0/0:15,0:15:42.14:0,42,3042	0/0:21,0:21:63.22:0,63,4172	0/0:19,0:19:57.20:0,57,4001	0/0:22,0:22:54.17:0,54,2994	0/0:12,0:12:33.11:0,33,2324	1/1:1,22:23:47.55:1449,48,0	1/1:2,13:15:26.90:833,27,0	0/0:15,0:15:36.12:0,36,1818	0/0:18,0:18:54.19:0,54,3327	0/0:22,0:22:63.22:0,63,4542	0/0:19,0:19:51.18:0,51,3397	0/0:19,0:19:57.20:0,57,4150	0/0:20,0:20:54.19:0,54,3925	0/0:7,0:7:21.07:0,21,1346	0/0:17,0:17:51.18:0,51,2999	0/0:23,0:23:66.23:0,66,4420	0/0:20,0:20:60.21:0,60,4264	0/0:22,0:22:60.21:0,60,4178	0/0:24,0:24:69.24:0,69,4917	0/0:8,0:8:24.08:0,24,1495	1/1:1,15:15:20.99:570,21,0	0/0:32,0:31:81.28:0,81,5396	0/0:28,0:28:81.28:0,81,5542	0/0:18,0:18:54.19:0,54,4143
chr10	73421266	.	GGA	G	119.64	PASS	AB=0.886;AC=14;AF=0.304;AN=46;BaseQRankSum=2.678;DP=476;FS=11.596;HRun=0;HaplotypeScore=68.7655;InbreedingCoeff=0.0675;MQ=70.30;MQ0=7;MQRankSum=2.425;QD=0.62;ReadPosRankSum=-0.649;VQSLOD=0.4580;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:6.01:0,6,68	0/1:7,0:8:2.10:2,0,97	./.	./.	0/0:20,0:20:3.01:0,3,44	./.	0/0:6,0:6:1.82:0,2,5	0/0:24,0:24:2.98:0,3,21	0/1:17,4:21:42.89:43,0,198	1/1:24,0:25:2.80:14,3,0	1/1:21,1:22:3.01:32,3,0	./.	0/0:18,0:18:5.99:0,6,50	0/1:19,1:21:28.05:28,0,133	0/0:9,0:16:9.02:0,9,112	0/1:13,2:15:10.93:11,0,221	0/1:11,3:13:45.91:46,0,154	0/0:10,0:10:6.02:0,6,73	1/1:19,0:19:3:32,3,0	0/0:15,0:15:6.01:0,6,69	0/0:16,0:16:9.03:0,9,126	0/0:16,0:16:2.51:0,3,27	0/0:19,0:18:3:0,3,25	0/0:13,0:13:9.03:0,9,121	1/1:18,0:20:5.68:28,6,0	0/0:21,0:21:16.28:0,16,191	0/1:26,1:27:13.92:14,0,199	./.
chr10	73423035	.	TAC	T	543.50	PASS	AB=0.932;AC=17;AF=0.327;AN=52;BaseQRankSum=3.057;DP=482;FS=0.705;HRun=0;HaplotypeScore=63.4376;InbreedingCoeff=0.0814;MQ=58.05;MQ0=14;MQRankSum=0.292;QD=2.58;ReadPosRankSum=0.414;VQSLOD=1.0746;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:22.59:0,23,228	0/0:13,0:12:20.97:0,21,242	./.	./.	0/1:15,1:17:40.06:40,0,220	0/0:17,0:17:24.08:0,24,349	0/1:21,2:23:76.22:76,0,170	0/0:22,0:22:9.03:0,9,131	0/0:10,0:10:3.01:0,3,45	1/1:8,9:18:23.87:228,24,0	1/1:4,6:10:3.01:33,3,0	0/1:6,1:17:8.81:9,0,200	0/0:8,0:8:12.44:0,12,141	0/1:10,2:11:23.82:24,0,60	0/0:15,0:16:9.90:0,10,258	0/0:16,0:16:3.26:0,3,435	0/0:13,0:13:27.38:0,27,355	1/1:7,0:9:2.84:14,3,0	0/0:5,0:5:9.01:0,9,99	0/1:16,0:16:6.31:6,0,162	0/1:28,1:27:8.44:8,0,431	0/0:19,0:21:24.03:0,24,276	0/0:9,0:15:6:0,6,51	0/1:17,1:26:32.60:33,0,294	1/1:5,7:12:14.87:145,15,0	0/1:13,0:13:65.77:66,0,114	0/0:12,0:12:15.05:0,15,224	0/1:6,1:7:20.80:21,0,122
chr10	73423737	.	C	CTG	325.64	PASS	AB=0.917;AC=11;AF=0.229;AN=48;BaseQRankSum=-2.040;DP=613;FS=0.000;HRun=0;HaplotypeScore=98.8314;InbreedingCoeff=0.1539;MQ=72.82;MQ0=19;MQRankSum=-1.441;QD=1.94;ReadPosRankSum=-2.138;VQSLOD=1.5794;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:36:6.03:0,6,59	./.	./.	./.	1/1:21,2:24:3.01:44,3,0	0/0:18,0:20:8.68:0,9,60	0/0:33,0:37:15.50:0,16,161	1/1:30,0:29:4.21:23,4,0	0/0:9,0:11:8.69:0,9,60	0/0:19,0:21:5.51:0,6,27	0/0:10,0:13:2.84:0,3,14	0/0:14,0:16:11.70:0,12,92	0/0:16,0:16:3:0,3,32	0/0:11,0:13:2.84:0,3,14	0/1:15,1:17:5.30:74,0,5	0/1:20,4:26:19.98:120,0,20	0/1:19,4:24:41.80:161,0,42	0/1:7,0:7:20.32:20,0,26	1/1:21,0:21:1.25:3,1,0	0/0:12,0:12:5.75:0,6,44	0/0:31,0:31:2.79:0,3,32	0/1:19,0:19:0:0,0,0	./.	0/0:27,0:27:20.88:0,21,206	0/0:14,0:21:7.50:0,7,33	0/0:18,0:17:5.24:0,5,63	0/0:24,0:29:14.31:0,14,87	0/0:10,0:9:5.81:0,6,46
chr10	73424748	.	T	TCAAA	856.34	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.342;DP=714;FS=2.401;HRun=0;HaplotypeScore=113.1951;InbreedingCoeff=0.9835;MQ=60.80;MQ0=6;MQRankSum=-2.030;QD=37.23;ReadPosRankSum=0.557;VQSLOD=3.4289;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:37.10:0,37,920	0/0:15,0:15:27.09:0,27,440	0/0:33,0:26:27.09:0,27,414	0/0:26,0:16:17.52:0,18,215	0/0:30,0:30:60.19:0,60,958	0/0:25,0:25:51.17:0,51,836	0/0:21,0:21:45.15:0,45,687	0/0:29,0:29:27.09:0,27,430	0/0:33,0:33:75.24:0,75,1192	0/0:29,0:30:71.74:0,72,1133	0/0:21,0:21:42.14:0,42,676	0/0:19,0:19:48.16:0,48,774	0/0:37,0:38:84.26:0,84,1317	0/0:25,0:25:48.16:0,48,786	0/0:31,0:31:75.24:0,75,1189	0/0:22,0:22:45.15:0,45,724	0/0:30,0:30:72.24:0,72,1144	1/1:5,18:23:39.13:951,39,0	0/0:18,0:16:21.06:0,21,284	0/0:38,0:38:87.23:0,87,1288	0/0:20,0:20:48.16:0,48,783	0/0:22,0:22:45.15:0,45,712	0/0:27,0:27:63.20:0,63,990	0/0:22,0:22:51.13:0,51,794	0/0:14,0:14:36.12:0,36,577	0/0:24,0:24:60.20:0,60,983	0/0:31,0:32:65.49:0,65,1047	0/0:11,0:11:32.78:0,33,473
chr10	73425652	.	C	CA	1529.61	PASS	AB=0.882;AC=25;AF=0.446;AN=56;BaseQRankSum=4.692;DP=532;FS=1.035;HRun=13;HaplotypeScore=86.3207;InbreedingCoeff=0.5494;MQ=48.53;MQ0=15;MQRankSum=-4.237;QD=5.33;ReadPosRankSum=-0.910;VQSLOD=2.2643;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,12:30:15.79:404,16,0	0/0:4,0:4:8.91:0,9,61	0/1:8,0:5:6.57:7,0,36	0/0:6,0:2:5.34:0,5,23	0/0:27,2:28:27.48:0,27,326	0/0:20,0:20:38.59:0,39,267	0/0:17,0:16:28.76:0,29,189	0/1:24,5:30:27.72:28,0,257	0/0:16,1:17:26.62:0,27,181	1/1:6,9:14:21.50:196,21,0	1/1:5,6:11:9.01:84,9,0	1/1:18,0:21:11.65:73,12,0	1/1:11,1:15:26.32:170,26,0	0/0:14,2:15:0.73:0,1,134	0/0:17,0:16:22.74:0,23,153	0/0:22,0:23:38.45:0,38,262	0/1:21,5:25:40.28:40,0,143	1/1:6,0:11:13.39:87,13,0	0/1:18,1:19:16.68:17,0,163	0/1:15,3:19:36.11:36,0,65	0/0:35,0:31:46.50:0,46,312	1/1:18,2:24:26.26:173,26,0	1/1:8,2:18:17.36:98,17,0	1/1:13,3:17:17.62:129,18,0	1/1:7,8:17:9.45:193,9,0	0/0:27,1:26:7.73:0,8,197	0/0:22,0:24:43.65:0,44,277	0/0:7,0:5:8.90:0,9,60
chr10	73425678	.	CGT	C	1219.14	PASS	AB=0.926;AC=24;AF=0.444;AN=54;BaseQRankSum=9.192;DP=500;FS=2.661;HRun=0;HaplotypeScore=96.8506;InbreedingCoeff=0.3613;MQ=53.69;MQ0=8;MQRankSum=-2.518;QD=4.42;ReadPosRankSum=2.176;VQSLOD=2.6460;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:29:10.12:0,10,184	0/1:10,1:11:13.01:13,0,233	./.	0/0:25,0:6:8.88:0,9,59	0/1:30,2:32:4.92:5,0,766	0/0:19,1:20:8.09:0,8,555	0/0:14,0:14:24.06:0,24,341	0/1:27,1:28:4.06:4,0,282	0/0:16,0:16:27.07:0,27,379	1/1:15,3:16:22.55:200,23,0	1/1:7,5:12:4.79:26,5,0	1/1:3,8:11:23.98:244,24,0	1/1:6,6:12:17.97:175,18,0	0/1:16,1:17:14.99:15,0,332	0/0:21,0:21:40.80:0,41,615	0/0:19,0:19:42.12:0,42,605	0/1:16,1:17:3.95:4,0,375	1/1:10,1:11:5.96:47,6,0	0/0:21,0:21:25.27:0,25,310	0/1:16,1:16:12.98:13,0,252	0/1:30,4:33:63.10:63,0,390	1/1:2,11:13:32.93:317,33,0	1/1:7,3:12:14.76:108,15,0	1/1:6,7:11:15:155,15,0	0/1:15,3:18:13.83:14,0,17	0/0:26,0:25:5.48:0,5,439	0/0:14,0:14:15.05:0,15,223	0/0:3,0:3:3.01:0,3,44
chr10	73425680	.	T	TAC	871.62	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=6.551;DP=512;FS=15.794;HRun=0;HaplotypeScore=112.1991;InbreedingCoeff=0.3735;MQ=53.18;MQ0=9;MQRankSum=-2.781;QD=7.85;ReadPosRankSum=-2.750;VQSLOD=1.9557;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:33.19:0,33,432	0/0:15,0:15:4.80:0,5,428	0/0:16,0:3:7.91:0,8,66	0/0:28,0:6:17.97:0,18,177	0/0:32,0:32:50.09:0,50,1148	0/0:20,0:20:57.11:0,57,852	0/0:15,0:15:39.11:0,39,560	0/0:27,0:27:57.52:0,58,881	0/0:14,0:14:36.10:0,36,499	1/1:11,8:17:32.73:425,33,0	1/1:14,1:15:15.04:209,15,0	0/1:12,0:12:49.09:49,0,159	0/1:11,0:11:26.99:27,0,101	0/0:16,0:16:34.02:0,34,601	0/0:21,0:21:55.58:0,56,771	0/0:20,0:20:57.16:0,57,828	0/0:17,0:17:42.05:0,42,597	0/0:12,0:12:2.50:0,3,174	0/0:23,0:22:48.70:0,49,630	0/0:18,1:18:39.03:0,39,525	0/0:34,0:33:71.60:0,72,943	0/1:14,0:14:5.06:5,0,227	0/1:13,0:13:14.33:14,0,210	0/1:11,0:9:46.44:46,0,129	1/1:15,1:16:10.21:254,10,0	0/0:30,0:29:68.24:0,68,880	0/0:13,0:13:30.09:0,30,435	0/0:3,0:3:9.03:0,9,137
chr10	73426168	.	TAATA	T	2774.49	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.819;DP=592;FS=1.822;HRun=0;HaplotypeScore=91.6934;InbreedingCoeff=0.9789;MQ=55.93;MQ0=13;MQRankSum=1.089;QD=36.51;ReadPosRankSum=4.464;VQSLOD=3.5808;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:84.29:0,84,2107	0/0:12,0:12:30.10:0,30,762	0/0:18,0:9:21.03:0,21,477	0/0:11,0:8:15.05:0,15,373	0/0:32,0:32:87.30:0,87,2156	0/0:26,0:24:51.16:0,51,1243	0/0:7,0:7:12.02:0,12,253	0/0:32,0:27:54.19:0,54,1371	0/0:22,0:22:57.14:0,57,1341	1/1:2,24:25:69.24:1200,69,0	1/1:4,19:18:42.14:726,42,0	0/0:12,0:12:33.11:0,33,838	0/0:16,0:16:39.13:0,39,990	0/0:17,0:17:39.13:0,39,988	0/0:25,0:25:66.23:0,66,1677	0/0:20,0:20:57.20:0,57,1376	0/0:19,0:19:57.20:0,57,1448	0/0:25,0:25:54.19:0,54,1320	0/0:24,0:21:42.14:0,42,1066	0/0:23,0:23:63.22:0,63,1600	0/0:17,0:17:36.12:0,36,897	0/0:19,0:19:48.12:0,48,1146	0/0:18,0:18:48.12:0,48,1146	0/0:27,0:26:78.27:0,78,1893	1/1:5,22:26:57.19:991,57,0	0/0:27,0:27:75.26:0,75,1905	0/0:27,0:27:69.24:0,69,1753	0/0:6,0:6:18.06:0,18,457
chr10	73426246	.	C	CT	1886.26	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-5.533;DP=554;FS=5.756;HRun=9;HaplotypeScore=54.1909;InbreedingCoeff=0.9890;MQ=62.19;MQ0=9;MQRankSum=-1.433;QD=25.15;ReadPosRankSum=1.804;VQSLOD=4.5416;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,1063	0/0:10,0:10:23.99:0,24,208	0/0:12,0:7:17.59:0,18,141	0/0:10,0:8:14.91:0,15,120	0/0:29,0:29:77.96:0,78,672	0/0:16,0:16:38.99:0,39,339	0/0:12,0:11:26.99:0,27,234	0/0:44,0:42:95.91:0,96,826	0/0:20,0:20:47.98:0,48,417	1/1:7,21:29:68.86:740,69,0	1/1:3,20:23:51.14:562,51,0	0/0:16,0:16:35.97:0,36,313	0/0:13,0:13:35.99:0,36,312	0/0:14,0:14:41.98:0,42,360	0/0:15,0:15:38.97:0,39,335	0/0:12,0:12:29.99:0,30,260	0/0:24,0:24:62.85:0,63,532	0/0:3,0:22:32.59:0,33,96	0/0:28,0:27:62.96:0,63,547	0/0:25,0:25:62.98:0,63,547	0/0:12,0:12:35.99:0,36,313	0/0:15,0:15:38.98:0,39,338	0/0:23,0:23:62.97:0,63,547	0/0:15,0:15:35.98:0,36,312	1/1:1,22:23:66.18:727,66,0	0/0:17,0:17:38.99:0,39,339	0/0:19,0:18:41.98:0,42,365	0/0:10,0:9:26.94:0,27,226
chr10	73427750	.	ACT	A	276.53	PASS	AB=0.797;AC=2;AF=0.036;AN=56;BaseQRankSum=6.539;DP=425;FS=6.005;HRun=0;HaplotypeScore=62.3725;InbreedingCoeff=-0.0430;MQ=90.56;MQ0=0;MQRankSum=6.330;QD=6.28;ReadPosRankSum=-3.319;VQSLOD=1.4840;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:42.14:0,42,852	0/0:3,0:3:9.03:0,9,173	0/1:13,6:17:99:196,0,414	0/1:20,5:20:99:170,0,400	0/0:29,0:29:87.28:0,87,1725	0/0:25,0:25:75.24:0,75,1486	0/0:7,0:7:21.05:0,21,376	0/0:35,0:35:99:0,105,2056	0/0:13,0:13:39.12:0,39,736	0/0:22,0:22:63.21:0,63,1211	0/0:11,0:11:33.10:0,33,618	0/0:11,0:11:33.11:0,33,657	0/0:10,0:10:27.08:0,27,511	0/0:7,0:7:21.05:0,21,390	0/0:11,0:11:30.06:0,30,501	0/0:11,0:11:33.11:0,33,670	0/0:26,0:26:78.21:0,78,1469	0/0:15,0:15:36.07:0,36,653	0/0:17,0:17:51.18:0,51,1036	0/0:17,0:17:51.16:0,51,1000	0/0:14,0:14:42.11:0,42,757	0/0:4,0:4:12.03:0,12,208	0/0:8,0:8:24.08:0,24,478	0/0:3,0:3:9.03:0,9,183	0/0:11,0:11:33.10:0,33,633	0/0:24,0:24:72.24:0,72,1420	0/0:19,0:19:57.20:0,57,1151	0/0:11,0:11:30.10:0,30,608
chr10	73427779	.	C	CTA	1163.09	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=-1.329;DP=393;FS=4.402;HRun=0;HaplotypeScore=50.9141;InbreedingCoeff=0.8498;MQ=77.97;MQ0=0;MQRankSum=-0.122;QD=19.71;ReadPosRankSum=2.166;VQSLOD=3.0464;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:24.08:405,24,0	0/0:3,0:3:9.02:0,9,102	0/0:12,0:8:0.27:0,0,12	0/0:34,0:18:7.23:0,7,40	0/0:22,0:22:57.16:0,57,717	0/0:29,0:29:75.21:0,75,944	0/0:6,0:6:12.04:0,12,154	0/0:43,0:43:99:0,108,1377	0/0:12,0:12:33.11:0,33,425	0/0:19,0:19:54.18:0,54,695	0/0:10,0:10:24.08:0,24,309	1/1:4,1:10:13.24:107,13,0	1/1:3,0:8:9:80,9,0	0/0:6,0:6:15.04:0,15,179	0/0:6,0:6:15.05:0,15,193	0/0:11,0:11:27.09:0,27,347	0/0:22,0:22:57.19:0,57,734	1/1:0,17:16:36.12:607,36,0	0/0:19,0:19:45.15:0,45,579	0/0:12,0:12:33.11:0,33,424	0/0:8,0:8:21.07:0,21,270	1/1:0,0:3:3:27,3,0	1/1:1,0:6:12.01:107,12,0	./.	0/0:12,0:12:27.07:0,27,332	0/0:17,0:17:42.14:0,42,541	0/0:14,0:14:24.08:0,24,309	0/0:16,0:16:39.08:0,39,483
chr10	73428739	.	T	TTTTTG	11739.56	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-11.360;DP=562;FS=3.456;HRun=0;HaplotypeScore=93.9529;InbreedingCoeff=0.9900;MQ=73.01;MQ0=1;MQRankSum=-5.626;QD=55.38;ReadPosRankSum=1.083;VQSLOD=4.9730;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,20:31:63.22:1784,63,0	0/0:7,0:7:12.04:0,12,228	0/0:29,0:28:46.85:0,47,793	0/0:13,0:12:24.08:0,24,431	0/0:15,0:15:36.12:0,36,683	0/0:19,0:19:51.15:0,51,885	0/0:20,0:20:51.16:0,51,934	0/0:26,0:26:39.12:0,39,670	0/0:20,0:20:57.18:0,57,1036	1/1:16,11:29:48.16:1229,48,0	1/1:3,11:16:39.09:1037,39,0	1/1:2,13:16:33.11:953,33,0	1/1:3,15:18:45.15:1291,45,0	0/0:12,0:12:30.08:0,30,505	0/0:19,0:19:48.16:0,48,910	0/0:14,0:14:36.11:0,36,645	0/0:17,0:17:42.14:0,42,787	1/1:10,13:25:42.14:1171,42,0	0/0:30,0:30:51.12:0,51,821	0/0:28,0:28:78.23:0,78,1360	0/0:23,0:23:60.21:0,60,1126	1/1:10,8:18:33.11:883,33,0	1/1:4,17:22:54.18:1529,54,0	1/1:5,15:20:42.14:1168,42,0	1/1:5,11:17:24.08:694,24,0	0/0:23,0:23:48.16:0,48,880	0/0:29,0:29:75.26:0,75,1412	0/0:6,0:5:11.98:0,12,128
chr10	73431529	.	C	CAA	3717.70	PASS	AB=0.943;AC=7;AF=0.125;AN=56;BaseQRankSum=-2.670;DP=665;FS=0.975;HRun=3;HaplotypeScore=88.0993;InbreedingCoeff=0.8396;MQ=85.75;MQ0=1;MQRankSum=-1.535;QD=36.45;ReadPosRankSum=1.334;VQSLOD=3.4573;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,1698	0/0:10,0:10:30.10:0,30,459	0/0:29,0:28:77.04:0,77,1093	0/0:22,0:21:44.14:0,44,768	0/0:31,0:31:87.25:0,87,1267	0/0:32,0:31:96.28:0,96,1402	0/0:17,0:16:51.17:0,51,778	0/0:27,0:27:81.28:0,81,1240	0/0:23,0:23:66.22:0,66,1009	1/1:3,24:27:78.26:1450,78,0	1/1:2,16:16:51.15:919,51,0	0/0:15,0:15:45.15:0,45,688	0/0:15,0:15:45.15:0,45,687	0/0:21,0:21:63.20:0,63,934	0/0:17,0:17:51.15:0,51,739	0/0:19,0:19:57.19:0,57,873	0/0:26,0:26:75.25:0,75,1140	0/0:25,0:25:75.23:0,75,1125	0/0:19,0:19:57.18:0,57,835	0/0:32,0:32:96.30:0,96,1422	0/0:22,0:22:66.21:0,66,985	0/0:22,0:22:63.21:0,63,964	0/0:29,0:29:84.27:0,84,1264	0/0:17,0:17:51.17:0,51,781	1/1:1,23:24:69.24:1332,69,0	0/1:31,2:33:16.62:17,0,1324	0/0:33,0:33:99:0,99,1513	0/0:19,0:19:57.19:0,57,869
chr10	73431569	.	C	CAAA	2230.45	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.413;DP=711;FS=6.423;HRun=4;HaplotypeScore=127.0050;InbreedingCoeff=0.9995;MQ=70.09;MQ0=7;MQRankSum=-6.026;QD=26.24;ReadPosRankSum=-4.586;VQSLOD=-0.5792;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:40.09:0,40,518	0/0:11,0:11:30.08:0,30,425	0/0:50,0:28:63.71:0,64,853	0/0:39,0:28:35.77:0,36,467	0/0:28,0:28:84.29:0,84,1284	0/0:31,0:30:90.27:0,90,1325	0/0:18,0:17:45.13:0,45,666	0/0:24,0:24:60.18:0,60,875	0/0:22,0:22:60.18:0,60,889	1/1:29,6:35:46.72:821,47,0	1/1:12,10:25:63.43:944,63,0	0/0:13,0:13:39.12:0,39,574	0/0:17,0:17:39.11:0,39,575	0/0:19,0:19:54.18:0,54,821	0/0:24,0:24:69.22:0,69,1030	0/0:19,0:19:48.15:0,48,713	0/0:22,0:22:60.20:0,60,916	0/0:22,0:22:60.20:0,60,892	0/0:23,0:22:60.12:0,60,822	0/0:27,0:27:72.21:0,72,1051	0/0:22,0:22:60.17:0,60,855	0/0:29,0:29:72.21:0,72,1050	0/0:29,0:29:84.23:0,84,1212	0/0:14,0:14:33.08:0,33,466	1/1:16,5:24:34.72:608,35,0	0/0:35,0:35:96.31:0,96,1438	0/0:32,0:32:84.26:0,84,1260	0/0:17,0:17:48.09:0,48,685
chr10	73431573	.	AC	A	1226.94	PASS	AB=0.977;AC=7;AF=0.125;AN=56;BaseQRankSum=12.940;DP=692;FS=8.829;HRun=1;HaplotypeScore=91.9159;InbreedingCoeff=0.8387;MQ=73.27;MQ0=7;MQRankSum=-5.538;QD=9.89;ReadPosRankSum=-4.749;VQSLOD=-0.6884;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:25.26:0,25,326	0/0:11,0:11:32.97:0,33,411	0/0:47,1:27:27.70:0,28,529	0/1:41,1:31:17.09:17,0,445	0/0:29,0:29:87.25:0,87,1119	0/0:33,0:33:99:0,99,1168	0/0:17,0:16:51.15:0,51,655	0/0:25,0:25:75.17:0,75,895	0/0:22,0:22:66.05:0,66,774	1/1:29,4:32:71.42:525,71,0	1/1:22,3:25:66.84:444,67,0	0/0:15,0:15:45.09:0,45,529	0/0:16,0:16:48.14:0,48,617	0/0:18,0:18:54.16:0,54,698	0/0:23,0:23:69.23:0,69,915	0/0:17,0:17:51.17:0,51,675	0/0:20,0:20:60.20:0,60,793	0/0:21,0:21:62.14:0,62,766	0/0:23,0:22:62.73:0,63,722	0/0:27,0:27:78.16:0,78,957	0/0:20,0:20:59.99:0,60,749	0/0:26,0:26:65.75:0,66,948	0/0:28,0:28:84.19:0,84,1033	0/0:14,0:14:41.26:0,41,461	1/1:22,1:23:56.50:390,57,0	0/0:35,0:35:72.28:0,72,1213	0/0:29,0:29:87.23:0,87,1105	0/0:17,0:17:48.09:0,48,595
chr10	73431574	.	C	CAA	2114.47	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.209;DP=695;FS=1.373;HRun=8;HaplotypeScore=102.9463;InbreedingCoeff=0.9972;MQ=72.63;MQ0=7;MQRankSum=-1.558;QD=18.39;ReadPosRankSum=-2.709;VQSLOD=1.6354;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,20:34:70.89:947,71,0	0/0:10,0:11:24.04:0,24,326	0/0:46,0:26:30.25:0,30,488	0/0:42,0:31:39.47:0,39,412	0/0:29,0:29:81.19:0,81,891	0/0:34,0:34:81.16:0,81,883	0/0:17,0:16:51.10:0,51,548	0/0:26,0:26:63.09:0,63,674	0/0:22,0:22:54.13:0,54,600	1/1:33,0:32:33.71:430,34,0	1/1:25,0:25:57.55:531,58,0	0/0:15,0:15:39.08:0,39,424	0/0:16,0:16:48.13:0,48,533	0/0:18,0:18:51.12:0,51,559	0/0:23,0:23:69.17:0,69,758	0/0:17,0:17:51.14:0,51,568	0/0:20,0:20:57.14:0,57,635	0/0:21,0:21:39.18:0,39,584	0/0:23,0:22:47.83:0,48,504	0/0:26,0:26:66.14:0,66,725	0/0:19,0:20:48.06:0,48,593	0/0:26,0:27:59.73:0,60,757	0/0:30,0:30:66.14:0,66,736	0/0:14,0:14:19.17:0,19,357	1/1:23,0:23:28.54:367,29,0	0/0:34,0:35:63:0,63,921	0/0:30,0:30:78.19:0,78,869	0/0:15,0:15:42.11:0,42,468
chr10	73432176	.	CT	C	1460.59	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=6.761;DP=483;FS=1.675;HRun=9;HaplotypeScore=52.1118;InbreedingCoeff=0.7366;MQ=72.79;MQ0=0;MQRankSum=4.191;QD=13.40;ReadPosRankSum=0.411;VQSLOD=3.2089;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:63.19:0,63,726	0/0:12,0:12:24.07:0,24,277	0/1:21,0:15:0.03:0,0,135	0/1:14,0:9:8.18:8,0,23	0/0:29,0:29:72.17:0,72,816	0/0:16,0:16:42.12:0,42,485	0/0:10,0:11:15.04:0,15,173	0/0:21,0:21:51.15:0,51,589	0/0:16,0:16:39.11:0,39,447	1/1:4,21:25:63.03:576,63,0	1/1:3,18:21:29.31:418,29,0	0/0:15,0:15:42.12:0,42,482	0/0:16,0:17:41.96:0,42,463	0/0:9,0:9:18.05:0,18,207	0/0:14,0:14:39.11:0,39,447	0/0:13,0:13:33.09:0,33,370	0/0:27,0:27:69.20:0,69,794	0/0:10,0:10:24.07:0,24,276	0/0:25,0:24:63.17:0,63,716	0/0:32,0:32:90.27:0,90,1038	0/0:4,0:4:9.03:0,9,103	0/0:5,0:5:12.04:0,12,138	0/0:11,0:11:33.09:0,33,370	0/0:6,0:6:9.03:0,9,104	1/1:1,27:28:66.04:604,66,0	0/0:22,0:22:63.19:0,63,727	0/0:26,0:26:66.17:0,66,737	0/0:10,0:10:12.02:0,12,127
chr10	73433570	.	CT	C	680.57	PASS	AB=0.982;AC=17;AF=0.304;AN=56;BaseQRankSum=8.785;DP=369;FS=0.560;HRun=10;HaplotypeScore=63.5553;InbreedingCoeff=0.4732;MQ=85.72;MQ0=2;MQRankSum=-2.620;QD=6.19;ReadPosRankSum=0.213;VQSLOD=1.1839;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,11:14:23.98:208,24,0	0/0:5,0:5:12.03:0,12,133	0/0:25,2:17:26.58:0,27,184	0/0:35,1:24:18.25:0,18,157	0/1:9,0:9:4.38:4,0,141	0/0:12,0:12:21.06:0,21,232	0/0:13,0:12:26.99:0,27,282	0/0:30,0:30:63.10:0,63,648	0/0:3,0:3:3.01:0,3,33	0/1:20,0:20:65.93:112,0,66	1/1:20,0:20:42.86:233,43,0	1/1:7,0:7:11.37:60,11,0	1/1:5,0:4:2.74:12,3,0	0/0:4,0:4:5.50:0,6,42	0/0:15,0:15:39.02:0,39,404	0/0:8,0:7:18.05:0,18,199	0/0:27,0:27:54.12:0,54,580	0/1:9,1:10:8.63:9,0,123	0/0:22,0:22:52.72:0,53,580	0/0:12,0:12:4.05:0,4,264	0/0:6,0:6:15.02:0,15,156	1/1:1,0:1:2.74:12,3,0	0/1:8,0:8:16.07:52,0,16	0/1:6,0:6:9.29:39,0,9	1/1:9,1:10:22.76:117,23,0	0/0:15,0:15:27.94:0,28,417	0/0:12,0:12:33.07:0,33,355	0/0:11,0:11:30.54:0,31,323
chr10	73433580	.	TA	T	1829.05	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=9.315;DP=380;FS=3.077;HRun=3;HaplotypeScore=62.9925;InbreedingCoeff=0.7140;MQ=90.74;MQ0=3;MQRankSum=-1.093;QD=14.63;ReadPosRankSum=-0.818;VQSLOD=2.5749;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:6.52:23,0,7	0/0:6,0:6:18.02:0,18,207	0/0:36,2:26:5.44:0,5,212	0/1:44,0:29:16.19:16,0,110	0/0:13,0:13:32.69:0,33,333	0/0:11,0:11:24.07:0,24,304	0/0:9,0:9:24.08:0,24,321	0/0:28,0:28:66.08:0,66,758	0/0:1,0:1:3.01:0,3,40	1/1:7,12:19:45.11:513,45,0	1/1:4,14:18:51.13:595,51,0	1/1:0,7:7:12.04:148,12,0	1/1:0,3:2:3.01:37,3,0	0/0:3,0:3:6.01:0,6,66	0/0:16,0:16:42.03:0,42,507	0/0:8,0:7:21.02:0,21,245	0/0:26,0:26:63.12:0,63,786	0/0:11,0:11:18.25:0,18,232	0/0:26,0:26:57.99:0,58,820	0/0:12,0:12:30.47:0,30,348	0/0:6,0:6:15.04:0,15,185	1/1:0,1:1:3.01:37,3,0	1/1:1,5:6:10.26:177,10,0	1/1:1,4:5:12.04:148,12,0	1/1:4,6:10:29.97:325,30,0	0/0:17,0:17:45.98:0,46,545	0/0:13,0:13:36.04:0,36,442	0/0:9,0:10:20.16:0,20,352
chr10	73433600	.	CT	C	837.21	PASS	AB=0.961;AC=12;AF=0.214;AN=56;BaseQRankSum=7.254;DP=352;FS=3.872;HRun=11;HaplotypeScore=53.1599;InbreedingCoeff=0.5494;MQ=80.56;MQ0=7;MQRankSum=-2.846;QD=5.90;ReadPosRankSum=-0.475;VQSLOD=1.1712;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:18.03:0,18,184	0/1:7,0:7:6.59:7,0,142	0/1:34,0:22:11.70:12,0,98	0/1:35,1:23:0.38:0,0,109	0/0:16,0:16:36.09:0,36,382	0/0:13,0:13:26.28:0,26,262	0/1:8,1:8:6.65:7,0,129	0/0:26,0:25:57.14:0,57,607	0/0:3,0:3:9.02:0,9,96	1/1:6,8:15:37.65:285,38,0	1/1:2,13:14:38.91:314,39,0	0/0:3,0:3:6.02:0,6,64	0/0:5,0:4:6.02:0,6,64	0/0:4,0:4:12.03:0,12,127	0/0:15,0:15:42.04:0,42,433	0/0:5,0:4:12.03:0,12,128	0/0:24,0:24:51.06:0,51,521	1/1:2,10:12:26.01:203,26,0	0/0:27,0:26:28.93:0,29,483	0/0:9,0:9:24.05:0,24,250	0/0:6,0:6:12.03:0,12,128	0/0:1,0:1:0:0,0,0	0/0:6,0:5:9.02:0,9,96	0/0:2,0:2:6.02:0,6,64	1/1:2,9:11:20.97:172,21,0	0/0:13,0:13:27.05:0,27,271	0/0:10,0:10:24.02:0,24,238	0/0:12,1:12:11.39:0,11,311
chr10	73433979	.	TCTTTTC	T	993.43	PASS	AB=0.996;AC=20;AF=0.370;AN=54;BaseQRankSum=0.836;DP=364;FS=39.762;HRun=0;HaplotypeScore=76.2108;InbreedingCoeff=-0.1951;MQ=61.83;MQ0=18;MQRankSum=-1.226;QD=4.66;ReadPosRankSum=-2.195;VQSLOD=-0.2929;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:18:44.95:45,0,86	0/0:7,0:7:21.04:0,21,313	0/1:26,0:6:4.19:4,0,71	0/0:35,0:15:9.65:0,10,209	0/0:17,0:16:2.34:0,2,489	0/1:18,0:18:81.55:82,0,184	0/1:12,0:12:28.50:28,0,164	0/1:18,0:16:93.11:93,0,155	0/1:9,0:9:10.11:10,0,195	1/1:2,4:3:5.98:74,6,0	1/1:0,8:8:15.01:180,15,0	0/1:14,0:14:23.81:90,0,24	0/0:9,0:9:4.58:0,5,69	0/0:11,0:11:17.64:0,18,422	0/1:8,0:8:99:102,0,248	0/0:14,0:14:17.25:0,17,324	0/0:26,0:22:0.40:0,0,590	0/1:16,0:17:4.08:4,0,390	0/0:17,0:16:0.24:0,0,573	0/0:6,0:9:20.42:0,20,354	0/1:4,0:4:19.55:20,0,144	./.	0/0:4,0:4:8.05:0,8,136	0/1:5,0:5:8.03:8,0,64	1/1:6,0:6:18.02:281,18,0	0/1:22,0:21:41.38:41,0,418	0/1:12,0:11:41.37:75,0,41	0/1:7,0:6:13.49:13,0,176
chr10	73434502	.	G	GGTGT	573.66	PASS	AB=0.923;AC=13;AF=0.250;AN=52;BaseQRankSum=-1.277;DP=538;FS=2.024;HRun=0;HaplotypeScore=107.4473;InbreedingCoeff=0.4113;MQ=60.43;MQ0=13;MQRankSum=2.295;QD=3.77;ReadPosRankSum=-0.807;VQSLOD=2.2611;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:28:1.19:1,0,45	0/0:7,0:7:5.94:0,6,92	./.	./.	0/0:23,0:23:18.51:0,19,240	0/0:15,0:15:9.02:0,9,120	0/0:21,0:26:8.55:0,9,196	1/1:22,0:21:2.92:17,3,0	0/0:10,0:12:6.01:0,6,74	0/0:13,0:14:3.47:0,3,29	0/0:7,0:10:0:0,0,0	1/1:8,4:14:8.77:151,9,0	0/1:14,5:20:40.19:64,0,40	0/0:16,0:16:8.88:0,9,115	0/0:21,0:22:29.98:0,30,423	0/0:19,0:21:2.17:0,2,278	0/0:30,0:32:14.51:0,15,470	0/0:12,0:12:2.66:0,3,28	0/0:21,0:19:5.69:0,6,65	0/0:13,0:13:5.91:0,6,71	0/0:38,0:37:28.13:0,28,397	1/1:13,0:13:9:85,9,0	1/1:8,0:7:8.75:84,9,0	1/1:15,5:22:12.01:281,12,0	0/0:10,0:11:6.01:0,6,55	0/1:24,0:24:38.56:39,0,59	0/0:24,0:24:21.06:0,21,320	0/0:3,0:3:3.48:0,3,47
chr10	73434961	.	TG	T	591.46	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.113;DP=477;FS=14.130;HRun=2;HaplotypeScore=70.3708;InbreedingCoeff=0.9211;MQ=61.51;MQ0=2;MQRankSum=-5.203;QD=17.40;ReadPosRankSum=-1.018;VQSLOD=2.2892;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,6:13:6.52:145,7,0	0/0:8,0:8:24.07:0,24,340	0/0:19,0:19:54.14:0,54,751	0/0:16,0:16:44.64:0,45,593	0/0:24,0:24:72.22:0,72,1036	0/0:17,0:17:51.15:0,51,723	0/0:23,0:23:63.09:0,63,819	0/0:25,0:25:75.18:0,75,1006	0/0:16,0:16:48.16:0,48,697	1/1:0,6:6:15.01:149,15,0	1/1:0,10:10:27.08:328,27,0	0/0:14,0:14:39.04:0,39,412	0/0:13,0:13:23.99:0,24,243	0/0:18,0:18:48.14:0,48,680	0/0:13,0:13:39.12:0,39,565	0/0:19,0:19:57.17:0,57,815	0/0:31,0:31:87.20:0,87,1206	0/0:14,0:13:39.06:0,39,533	0/0:24,0:21:60.19:0,60,856	0/0:18,0:18:51.12:0,51,717	0/0:33,0:32:93.31:0,93,1383	0/0:2,0:2:6.02:0,6,76	0/0:15,0:15:44.98:0,45,453	0/0:23,0:23:57.02:0,57,615	1/1:0,4:4:9.03:117,9,0	0/0:25,0:25:75.22:0,75,1048	0/0:18,0:18:54.13:0,54,712	0/0:15,0:15:45.13:0,45,633
chr10	73434966	.	TTTG	T	1725.77	PASS	AB=0.987;AC=16;AF=0.296;AN=54;BaseQRankSum=8.710;DP=485;FS=2.656;HRun=0;HaplotypeScore=87.5052;InbreedingCoeff=0.6572;MQ=61.13;MQ0=5;MQRankSum=1.605;QD=13.28;ReadPosRankSum=1.192;VQSLOD=3.5042;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:16:5.91:98,0,6	0/0:8,0:8:21.07:0,21,414	0/0:18,0:17:11.79:0,12,113	0/0:17,0:16:15.05:0,15,224	0/0:24,0:24:54.19:0,54,1055	0/0:18,0:18:48.13:0,48,856	0/0:22,0:22:18.44:0,18,747	0/0:25,0:24:27.05:0,27,454	0/0:17,0:17:42.08:0,42,759	1/1:6,0:5:5.95:42,6,0	0/1:10,0:10:4.85:43,0,5	1/1:3,11:14:30.10:411,30,0	1/1:1,11:12:17.96:246,18,0	0/0:19,0:19:32.65:0,33,867	0/0:13,0:13:30.10:0,30,574	0/0:20,0:20:51.16:0,51,949	0/0:33,0:33:63.22:0,63,1187	0/1:13,0:12:15.91:25,0,16	0/0:24,0:21:33.09:0,33,614	0/0:20,0:20:42.04:0,42,772	0/0:35,0:34:69.20:0,69,1229	1/1:1,1:2:3.01:41,3,0	1/1:0,16:16:39.08:512,39,0	1/1:6,16:22:36.12:487,36,0	./.	0/0:25,0:25:57.20:0,57,1119	0/1:17,1:18:1.96:2,0,648	0/0:14,0:14:21.07:0,21,412
chr10	73434971	.	TGTTG	T	336.48	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=8.198;DP=478;FS=0.000;HRun=0;HaplotypeScore=100.2616;InbreedingCoeff=0.3104;MQ=59.94;MQ0=5;MQRankSum=-6.456;QD=7.48;ReadPosRankSum=-0.380;VQSLOD=2.1418;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,6:16:25.07:345,25,0	0/0:9,0:9:27.09:0,27,728	0/0:16,0:14:40.38:0,40,671	0/0:19,0:16:33.38:0,33,655	0/0:23,0:23:69.24:0,69,1782	0/0:18,0:18:54.19:0,54,1445	0/0:21,0:21:63.17:0,63,1450	0/0:25,0:24:72.23:0,72,1446	0/0:17,0:17:51.17:0,51,1323	0/1:4,0:3:25.77:49,0,26	0/1:10,0:10:52.23:52,0,122	0/0:13,0:13:28.04:0,28,154	0/0:12,0:12:16.33:0,16,89	0/0:19,0:19:44.92:0,45,1373	0/0:13,0:13:36.12:0,36,950	0/0:21,0:21:63.22:0,63,1658	0/0:33,0:33:90.27:0,90,2168	0/1:14,0:13:12.71:13,0,284	0/0:22,0:18:54.18:0,54,1240	0/0:21,0:21:57.15:0,57,1386	0/0:33,0:32:96.33:0,96,2350	0/0:2,0:2:5.23:0,5,49	0/0:16,0:16:35.66:0,36,192	0/0:21,0:21:42.27:0,42,310	0/0:3,0:3:9.03:0,9,126	0/0:23,0:23:69.22:0,69,1790	0/0:18,0:18:53.39:0,53,1277	0/0:15,0:15:45.15:0,45,972
chr10	73434989	.	TG	T	104.53	PASS	AB=0.897;AC=3;AF=0.054;AN=56;BaseQRankSum=5.108;DP=478;FS=7.756;HRun=1;HaplotypeScore=73.6386;InbreedingCoeff=-0.0590;MQ=53.91;MQ0=9;MQRankSum=-4.998;QD=4.54;ReadPosRankSum=-0.072;VQSLOD=-0.0434;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:9.55:0,10,398	0/0:10,0:10:27.09:0,27,426	0/0:21,0:7:15.05:0,15,228	0/0:23,0:14:29.95:0,30,435	0/0:23,0:23:66.22:0,66,1033	0/0:19,0:19:57.19:0,57,895	0/0:17,0:17:51.11:0,51,773	0/0:28,0:26:78.21:0,78,1114	0/0:16,0:16:48.16:0,48,754	0/1:6,0:5:7.12:7,0,113	0/1:8,0:8:9.43:9,0,58	0/0:14,0:14:21.47:0,21,140	0/0:14,0:14:16.48:0,16,147	0/0:20,0:20:60.12:0,60,903	0/0:12,0:12:33.11:0,33,522	0/0:23,0:23:69.23:0,69,1076	0/0:27,0:27:75.19:0,75,1158	0/1:5,4:8:61.01:177,0,61	0/0:25,0:17:51.16:0,51,766	0/0:18,0:18:54.17:0,54,822	0/0:29,0:28:84.27:0,84,1296	0/0:3,0:3:7.27:0,7,89	0/0:17,0:17:23.97:0,24,146	0/0:20,0:20:28.20:0,28,191	0/0:6,0:6:12.04:0,12,170	0/0:20,0:20:60.20:0,60,954	0/0:18,0:18:52.42:0,52,792	0/0:11,0:11:33.07:0,33,473
chr10	73434991	.	TTGTTGTTTTGTTGTTG	T	760.86	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=8.802;DP=482;FS=26.116;HRun=0;HaplotypeScore=207.9512;InbreedingCoeff=0.6527;MQ=53.84;MQ0=9;MQRankSum=-7.885;QD=15.22;ReadPosRankSum=-1.824;VQSLOD=1.0939;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:38.23:38,0,67	0/0:10,0:10:27.07:0,27,1843	0/0:23,0:9:24.08:0,24,518	0/0:25,0:16:37.01:0,37,1030	0/0:23,0:23:66.21:0,66,3745	0/0:20,0:20:60.21:0,60,3027	0/0:18,0:18:54.19:0,54,2931	0/0:28,0:26:75.23:0,75,2335	0/0:17,0:17:51.16:0,51,2818	1/1:5,2:6:12.24:261,12,0	1/1:5,3:8:16.61:521,17,0	0/0:14,0:14:39.13:0,39,1666	0/0:14,0:14:27.55:0,28,1195	0/0:21,0:21:63.20:0,63,3864	0/0:12,0:12:33.11:0,33,2162	0/0:23,0:23:69.24:0,69,3814	0/0:28,0:28:78.25:0,78,4492	0/1:8,0:7:65.34:65,0,69	0/0:23,0:17:51.17:0,51,2675	0/0:18,0:18:54.19:0,54,3339	0/0:28,0:27:81.26:0,81,4300	0/0:3,0:3:9.03:0,9,396	0/0:17,0:17:45.05:0,45,2052	0/0:20,0:20:48.11:0,48,1793	1/1:6,0:6:7.47:19,7,0	0/0:20,0:20:60.21:0,60,3926	0/0:18,0:18:54.17:0,54,3162	0/0:9,0:9:27.09:0,27,1905
chr10	73435005	.	TTG	T	1778.43	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.188;DP=533;FS=9.248;HRun=0;HaplotypeScore=85.4188;InbreedingCoeff=0.9282;MQ=51.36;MQ0=11;MQRankSum=-10.430;QD=31.76;ReadPosRankSum=-0.163;VQSLOD=5.4986;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:24:63.68:940,64,0	0/0:9,0:9:24.08:0,24,431	0/0:31,0:8:21.07:0,21,347	0/0:34,0:16:31.26:0,31,522	0/0:22,0:22:66.22:0,66,1151	0/0:22,0:22:60.12:0,60,911	0/0:22,0:22:63.15:0,63,991	0/0:35,0:33:90.24:0,90,1367	0/0:17,0:17:51.17:0,51,859	1/1:3,5:8:0.59:296,1,0	1/1:5,1:6:15.42:186,15,0	0/0:17,0:17:47.86:0,48,593	0/0:15,0:15:33.10:0,33,447	0/0:22,0:22:66.23:0,66,1185	0/0:12,0:12:33.09:0,33,538	0/0:20,0:20:60.19:0,60,1047	0/0:31,0:31:90.28:0,90,1474	1/1:6,3:8:16.86:211,17,0	0/0:29,0:20:57:0,57,935	0/0:19,0:19:57.20:0,57,1019	0/0:23,0:23:69.22:0,69,1190	0/0:5,0:5:15.05:0,15,228	0/0:20,0:20:51.14:0,51,679	0/0:19,0:19:39.17:0,39,488	1/1:1,8:8:21.07:308,21,0	0/0:23,0:23:69.20:0,69,1123	0/0:19,0:19:54.17:0,54,901	0/0:11,0:11:29.22:0,29,489
chr10	73435025	.	GT	G	578.58	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.342;DP=561;FS=1.639;HRun=8;HaplotypeScore=85.5243;InbreedingCoeff=0.7828;MQ=55.47;MQ0=12;MQRankSum=-8.707;QD=15.64;ReadPosRankSum=-0.455;VQSLOD=3.6966;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:63.09:605,63,0	0/0:8,0:8:24.07:0,24,286	0/0:39,0:9:17.78:0,18,180	0/0:42,0:19:24.71:0,25,288	0/0:19,0:19:46.38:0,46,546	0/0:18,0:18:48.15:0,48,573	0/0:21,0:21:60.17:0,60,708	0/0:32,0:32:78.19:0,78,925	0/0:16,0:16:48.15:0,48,579	0/0:10,0:11:2.72:0,3,82	0/0:10,0:9:9.20:0,9,124	0/0:17,0:17:48.15:0,48,578	0/0:19,0:18:39.12:0,39,471	0/0:18,0:18:51.16:0,51,616	0/0:14,0:14:39.12:0,39,471	0/0:20,0:20:54.17:0,54,652	0/0:34,0:33:90.28:0,90,1086	1/1:5,4:8:8.84:87,9,0	0/0:23,0:16:42.12:0,42,499	0/0:22,0:22:57.56:0,58,668	0/0:18,0:18:39.09:0,39,448	0/0:10,0:10:27.08:0,27,325	0/0:16,0:16:45.12:0,45,528	0/0:15,0:15:24.07:0,24,281	0/0:19,0:17:3.04:0,3,71	0/0:24,0:24:58.97:0,59,671	0/0:27,0:27:72.22:0,72,869	0/0:11,0:11:24.92:0,25,322
chr10	73435026	.	TTTTTTTTC	T	768.14	PASS	AB=0.893;AC=6;AF=0.107;AN=56;BaseQRankSum=5.333;DP=556;FS=15.128;HRun=0;HaplotypeScore=150.9385;InbreedingCoeff=0.4937;MQ=55.51;MQ0=12;MQRankSum=-4.863;QD=9.37;ReadPosRankSum=0.236;VQSLOD=2.0212;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:42.14:0,42,1087	0/0:8,0:8:12.04:0,12,436	0/0:40,0:9:5.81:0,6,103	0/1:42,0:19:0.08:0,0,230	0/0:19,0:19:30.10:0,30,1087	0/0:18,0:18:39.13:0,39,1545	0/0:21,0:21:39.13:0,39,1409	0/0:30,0:30:45.14:0,45,1331	0/0:16,0:16:27.08:0,27,841	0/1:8,3:11:7.56:300,0,8	1/1:10,0:9:1.48:59,1,0	0/0:17,0:17:42.13:0,42,1453	0/0:19,0:18:33.58:0,34,1223	0/0:18,0:18:36.11:0,36,1229	0/0:14,0:14:30.10:0,30,1088	0/0:20,0:20:48.15:0,48,1719	0/0:34,0:33:81.28:0,81,3062	0/0:9,0:8:12.04:0,12,290	0/0:22,0:15:30.09:0,30,1060	0/0:22,0:22:51.17:0,51,1880	0/0:17,0:17:24.07:0,24,831	0/0:10,0:10:27.08:0,27,929	0/0:16,0:16:30.10:0,30,1127	0/0:15,0:15:14.26:0,14,494	1/1:14,5:17:4.88:514,5,0	0/0:24,0:24:33.11:0,33,1245	0/0:26,0:26:60.21:0,60,2220	0/0:11,0:11:9.03:0,9,333
chr10	73435758	.	CCACTAACCCGTAGAT	C	4627.52	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.759;DP=599;FS=9.154;HRun=0;HaplotypeScore=239.0997;InbreedingCoeff=0.9985;MQ=90.85;MQ0=0;MQRankSum=-9.493;QD=90.74;ReadPosRankSum=2.305;VQSLOD=2.9683;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.18:0,60,3937	0/0:9,0:9:27.09:0,27,1811	0/0:30,0:30:84.29:0,84,5083	0/0:23,0:23:60.21:0,60,3037	0/0:28,0:28:84.27:0,84,6056	0/0:26,0:26:78.27:0,78,5607	0/0:22,0:22:66.23:0,66,4794	0/0:25,0:25:72.23:0,72,4299	0/0:25,0:25:69.24:0,69,4806	1/1:2,14:16:42.09:1665,42,0	1/1:1,15:16:33.11:1484,33,0	0/0:14,0:14:42.14:0,42,2904	0/0:18,0:18:54.19:0,54,3700	0/0:25,0:25:75.26:0,75,5167	0/0:27,0:27:78.27:0,78,5381	0/0:20,0:20:60.21:0,60,4297	0/0:20,0:20:60.21:0,60,4295	0/0:8,0:8:24.08:0,24,1801	0/0:19,0:19:57.18:0,57,3118	0/0:36,0:36:99:0,105,7265	0/0:20,0:20:60.19:0,60,3988	0/0:22,0:22:63.22:0,63,4140	0/0:34,0:34:93.32:0,93,6119	0/0:11,0:11:30.10:0,30,2251	1/1:3,16:19:33.11:1479,33,0	0/0:21,0:21:63.22:0,63,4514	0/0:32,0:32:96.33:0,96,6394	0/0:12,0:12:36.12:0,36,2554
chr10	73435869	.	G	GT	895.92	PASS	AB=0.921;AC=13;AF=0.232;AN=56;BaseQRankSum=6.486;DP=584;FS=6.885;HRun=14;HaplotypeScore=85.2376;InbreedingCoeff=0.3898;MQ=71.47;MQ0=1;MQRankSum=-0.951;QD=4.07;ReadPosRankSum=-6.543;VQSLOD=-0.5459;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:19:27.14:0,27,89	0/0:10,0:11:16.80:0,17,102	0/1:21,1:19:23.06:47,0,23	0/0:13,0:14:10.08:0,10,45	0/0:28,3:33:10.28:0,10,259	0/1:20,3:24:35.68:36,0,174	0/0:9,0:9:8.68:0,9,57	0/1:31,2:34:3.03:3,0,193	0/0:23,0:25:49.09:0,49,313	1/1:28,0:33:78.42:413,78,0	1/1:16,1:20:31.21:152,31,0	0/0:13,0:13:20.47:0,20,134	0/1:11,2:13:11.67:12,0,61	0/0:17,1:19:1.49:0,1,151	0/0:21,1:25:26.92:0,27,278	0/0:12,0:13:19.52:0,20,121	0/0:17,1:18:2.96:0,3,146	1/1:4,15:21:13.42:220,13,0	0/0:22,0:24:5.18:0,5,127	0/1:27,2:32:8.53:9,0,184	0/0:8,0:8:14.73:0,15,96	0/0:16,1:19:3.50:0,4,138	0/0:21,0:22:9.96:0,10,173	0/0:14,5:19:6.14:0,6,165	1/1:13,1:18:34.16:171,34,0	0/0:20,0:20:10.83:0,11,137	0/0:32,0:37:80.06:0,80,488	0/0:14,0:14:29.41:0,29,192
chr10	73435994	.	A	AC	2047.94	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.292;DP=556;FS=1.084;HRun=5;HaplotypeScore=72.7155;InbreedingCoeff=0.9863;MQ=79.21;MQ0=0;MQRankSum=-5.287;QD=29.68;ReadPosRankSum=1.102;VQSLOD=4.1358;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:60.15:0,60,645	0/0:12,0:12:36.07:0,36,373	0/0:15,0:15:45.07:0,45,463	0/0:13,0:13:33.08:0,33,352	0/0:29,0:29:87.20:0,87,926	0/0:21,0:21:60.12:0,60,630	0/0:10,0:10:30.08:0,30,322	0/0:29,0:29:81.17:0,81,851	0/0:18,0:18:48.12:0,48,516	1/1:2,15:17:48.15:619,48,0	1/1:6,31:37:84.27:1098,84,0	0/0:20,0:20:54.13:0,54,580	0/0:19,0:19:57.13:0,57,604	0/0:18,0:18:51.08:0,51,524	0/0:21,0:21:54.12:0,54,572	0/0:19,0:19:54.11:0,54,566	0/0:23,0:23:66.14:0,66,699	0/0:14,0:14:33.04:0,33,336	0/0:15,0:15:42.09:0,42,441	0/0:22,0:22:66.17:0,66,709	0/0:11,0:11:33.08:0,33,355	0/0:17,0:17:42.10:0,42,451	0/0:22,0:22:63.16:0,63,677	0/0:26,0:26:78.20:0,78,838	1/1:3,12:15:36.12:473,36,0	0/0:31,2:33:11.32:0,11,818	0/0:26,0:26:72.18:0,72,774	0/0:9,0:9:27.04:0,27,280
chr10	73436042	.	T	TTCATGACCCCC	8665.44	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=3.369;DP=613;FS=12.461;HRun=0;HaplotypeScore=192.1357;InbreedingCoeff=0.8339;MQ=81.33;MQ0=0;MQRankSum=-11.558;QD=92.19;ReadPosRankSum=-0.216;VQSLOD=3.9531;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.24:0,69,2392	0/0:8,0:8:18.06:0,18,640	0/0:29,0:29:75.25:0,75,2287	0/0:20,0:19:51.18:0,51,1659	0/0:25,0:24:75.23:0,75,2480	0/0:24,0:24:72.23:0,72,2431	0/0:19,0:19:54.16:0,54,1756	0/0:30,0:30:81.27:0,81,2564	0/0:18,0:18:51.18:0,51,1820	1/1:10,15:25:69.20:3640,69,0	1/1:14,8:23:51.16:2619,51,0	0/0:24,0:24:69.24:0,69,2421	0/0:22,0:22:66.22:0,66,2271	0/0:23,0:23:69.24:0,69,2379	0/0:21,0:21:57.18:0,57,1950	0/0:18,0:18:54.17:0,54,1843	0/0:19,0:19:54.19:0,54,1898	0/0:23,0:23:66.23:0,66,2309	0/0:14,0:14:42.13:0,42,1417	0/0:29,0:29:84.27:0,84,2790	0/0:23,0:23:66.23:0,66,2236	0/0:23,0:23:69.24:0,69,2402	0/0:24,0:24:63.22:0,63,2198	0/0:24,0:24:66.15:0,66,2061	1/1:3,13:16:42.14:2327,42,0	0/1:30,0:30:79.24:79,0,3014	0/0:28,0:28:81.28:0,81,2856	0/0:8,0:8:24.03:0,24,666
chr10	73436369	.	G	GGA	11212.75	PASS	AB=0.955;AC=21;AF=0.375;AN=56;BaseQRankSum=-7.064;DP=643;FS=4.768;HRun=0;HaplotypeScore=81.0234;InbreedingCoeff=0.9447;MQ=88.81;MQ0=0;MQRankSum=-2.365;QD=43.97;ReadPosRankSum=4.428;VQSLOD=6.7296;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,35:38:87.30:1681,87,0	0/0:10,0:10:30.10:0,30,453	0/0:22,0:22:60.20:0,60,900	0/0:32,0:32:84.08:0,84,1222	0/0:15,0:15:42.14:0,42,641	0/0:23,0:23:66.18:0,66,948	0/0:21,0:21:63.21:0,63,960	0/0:29,0:29:84.23:0,84,1222	0/0:26,0:26:75.24:0,75,1122	1/1:0,22:22:60.21:1158,60,0	1/1:1,26:28:54.19:1027,54,0	1/1:0,25:25:66.23:1275,66,0	1/1:1,23:24:51.17:985,51,0	0/0:17,0:17:48.16:0,48,735	0/0:22,0:22:60.20:0,60,917	0/0:29,0:29:87.30:0,87,1332	0/0:29,0:29:81.26:0,81,1220	1/1:0,19:19:54.19:1043,54,0	0/0:22,0:22:57.19:0,57,871	0/0:19,0:19:42.14:0,42,643	0/0:40,0:40:99:0,117,1744	1/1:0,19:19:48.16:927,48,0	1/1:0,21:21:57.20:1101,57,0	1/1:0,16:16:45.15:869,45,0	1/1:0,22:22:60.21:1143,60,0	0/1:20,1:21:3.80:4,0,725	0/0:25,0:25:72.24:0,72,1102	0/0:6,0:6:18.06:0,18,276
chr10	73437239	.	GC	G	51.47	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=3.474;DP=605;FS=0.000;HRun=1;HaplotypeScore=62.9421;InbreedingCoeff=0.8651;MQ=94.25;MQ0=0;MQRankSum=1.385;QD=8.58;ReadPosRankSum=-3.310;VQSLOD=-0.3357;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1653	0/0:10,0:10:30.10:0,30,480	0/0:31,0:31:84.01:0,84,1342	0/0:23,0:23:62.21:0,62,867	0/0:27,0:27:81.28:0,81,1295	0/0:23,0:23:69.22:0,69,1078	0/0:23,0:23:69.20:0,69,1056	0/0:39,0:39:99:0,114,1803	0/0:25,0:25:75.26:0,75,1199	1/1:0,3:3:9.03:109,9,0	./.	0/0:19,0:19:57.17:0,57,863	0/0:20,0:20:60.19:0,60,936	0/0:19,0:19:57.19:0,57,907	0/0:27,0:27:81.26:0,81,1267	0/0:12,0:12:36.12:0,36,576	0/0:21,0:21:63.21:0,63,1001	0/0:10,0:10:27.09:0,27,431	0/0:18,0:18:54.05:0,54,831	0/0:34,0:34:99:0,102,1615	0/0:47,0:47:99:0,138,2206	0/0:25,0:25:75.26:0,75,1199	0/0:22,0:22:66.23:0,66,1053	0/0:22,0:22:66.18:0,66,1027	1/1:0,3:3:3.01:42,3,0	0/0:24,0:24:72.24:0,72,1131	0/0:31,0:31:93.32:0,93,1487	0/0:10,0:10:30.10:0,30,480
chr10	73437904	.	CA	C	2166.20	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.831;DP=567;FS=0.000;HRun=8;HaplotypeScore=54.9358;InbreedingCoeff=0.9678;MQ=62.97;MQ0=3;MQRankSum=-1.668;QD=22.56;ReadPosRankSum=1.703;VQSLOD=4.0858;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:20:48.07:463,48,0	0/0:6,0:6:18.06:0,18,217	0/0:24,1:8:8.88:0,9,71	0/0:32,1:14:11.25:0,11,200	0/0:27,0:27:60.18:0,60,724	0/0:23,0:23:69.21:0,69,834	0/0:19,0:19:54.17:0,54,652	0/0:33,1:34:58.28:0,58,970	0/0:19,0:19:57.16:0,57,677	1/1:1,21:22:63.10:608,63,0	1/1:1,30:31:84.13:811,84,0	0/0:17,0:17:48.15:0,48,580	0/0:21,0:21:57.17:0,57,687	0/0:12,0:12:30.08:0,30,348	0/0:16,0:16:36.10:0,36,425	0/0:22,0:22:57.17:0,57,678	0/0:24,0:24:57.17:0,57,687	1/1:1,10:11:24.50:228,24,0	0/0:10,0:10:27.08:0,27,326	0/0:32,0:32:93.29:0,93,1123	0/0:12,0:12:36.11:0,36,435	0/0:17,0:17:48.15:0,48,580	0/0:24,0:24:66.19:0,66,787	0/0:16,0:16:42.13:0,42,507	1/1:1,11:12:24.03:232,24,0	0/0:25,0:25:66.20:0,66,796	0/0:33,0:33:78.23:0,78,928	0/0:4,0:4:12.04:0,12,145
chr10	73438201	.	G	GA	522.78	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=5.659;DP=482;FS=24.346;HRun=7;HaplotypeScore=92.6246;InbreedingCoeff=0.8046;MQ=46.23;MQ0=38;MQRankSum=-4.266;QD=10.25;ReadPosRankSum=-4.615;VQSLOD=-0.3274;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:16:15.72:0,16,191	0/0:7,0:6:5.99:0,6,53	0/1:3,0:1:0:0,0,0	0/0:3,0:2:2.99:0,3,24	0/0:17,0:15:27:0,27,255	0/0:16,0:15:39.06:0,39,372	0/0:20,0:15:33.03:0,33,316	0/0:20,0:19:54.07:0,54,517	0/0:14,0:14:17.50:0,17,221	1/1:9,9:16:27.08:326,27,0	1/1:13,3:14:23.65:185,24,0	0/0:22,1:22:19.52:0,20,270	0/0:18,0:18:21.01:0,21,197	0/0:10,0:10:8.93:0,9,87	0/0:21,0:19:9.20:0,9,238	0/0:25,0:25:32.66:0,33,299	0/0:39,0:36:56.56:0,57,546	0/0:16,0:13:11.25:0,11,189	0/0:17,0:15:19.51:0,20,264	0/0:13,0:12:24.02:0,24,223	0/0:16,0:15:27.02:0,27,260	0/0:12,0:12:14.97:0,15,140	0/0:14,0:14:17.78:0,18,153	0/0:19,0:19:23.40:0,23,211	1/1:11,3:14:16.49:150,16,0	0/0:26,0:22:44.97:0,45,411	0/0:29,0:24:41.77:0,42,398	0/0:12,0:9:20.98:0,21,193
chr10	73439435	.	GGT	G	156.15	PASS	AB=0.904;AC=12;AF=0.231;AN=52;BaseQRankSum=2.162;DP=467;FS=12.512;HRun=0;HaplotypeScore=81.5790;InbreedingCoeff=-0.1961;MQ=68.38;MQ0=20;MQRankSum=2.108;QD=0.90;ReadPosRankSum=0.705;VQSLOD=0.5944;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:2.99:0,3,25	0/0:6,0:6:5.37:0,5,106	./.	0/0:49,0:19:5.92:0,6,41	0/0:20,1:20:21.07:0,21,316	0/1:12,1:14:29.87:30,0,148	0/1:14,3:17:99:115,0,214	0/1:16,0:15:26.87:27,0,41	0/1:12,2:13:15.76:16,0,183	0/0:11,0:10:20.89:0,21,167	0/1:18,0:18:4.12:4,0,89	0/0:6,0:6:1.55:0,2,4	1/1:6,0:5:1.55:4,2,0	0/1:4,5:9:24.77:25,0,78	0/1:13,0:13:11.12:11,0,58	0/0:7,0:7:15:0,15,181	0/0:24,0:24:42.14:0,42,633	0/0:13,0:13:18.42:0,18,149	0/0:18,0:17:5.93:0,6,63	0/0:13,1:13:15.03:0,15,208	0/1:33,2:35:39.74:40,0,615	0/1:16,0:16:3.78:4,0,19	./.	0/0:21,0:19:2.89:0,3,25	0/0:13,0:12:7.57:0,8,82	0/0:12,0:11:12.04:0,12,177	0/1:13,2:15:9.72:10,0,293	0/0:9,0:11:6.94:0,7,232
chr10	73439464	.	G	GTA	560.99	PASS	AB=0.917;AC=6;AF=0.111;AN=54;BaseQRankSum=5.381;DP=551;FS=3.897;HRun=0;HaplotypeScore=86.4143;InbreedingCoeff=0.4956;MQ=42.11;MQ0=40;MQRankSum=-0.710;QD=8.01;ReadPosRankSum=1.875;VQSLOD=3.3373;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:24:4.95:5,0,21	0/0:6,0:5:12.03:0,12,155	0/0:71,0:11:29.65:0,30,228	0/0:80,0:13:29.71:0,30,260	0/0:17,0:16:33.05:0,33,408	0/0:14,0:14:37.44:0,37,351	0/0:20,0:18:44.86:0,45,461	0/0:16,0:16:40.83:0,41,368	0/0:12,0:11:23.99:0,24,275	0/1:12,3:14:55.22:181,0,55	1/1:13,3:16:12.67:138,13,0	0/0:5,0:4:2.88:0,3,15	0/0:13,0:10:5.93:0,6,41	0/0:11,0:11:20.98:0,21,210	0/0:11,0:10:24.01:0,24,261	0/0:9,0:9:27.01:0,27,304	0/0:23,0:23:57.07:0,57,753	1/1:10,4:13:33.50:364,34,0	0/0:9,0:7:20.90:0,21,186	0/0:15,0:14:33:0,33,352	0/0:37,0:34:84.03:0,84,986	0/0:20,0:20:5.90:0,6,40	./.	0/0:32,0:28:5.92:0,6,41	0/0:11,1:11:6.58:0,7,52	0/0:11,0:10:30.04:0,30,342	0/0:13,0:13:27.05:0,27,367	0/0:13,0:13:11.72:0,12,314
chr10	73439469	.	TAGA	T	315.79	PASS	AB=0.747;AC=9;AF=0.161;AN=56;BaseQRankSum=5.168;DP=514;FS=4.123;HRun=0;HaplotypeScore=83.3262;InbreedingCoeff=0.2395;MQ=42.33;MQ0=35;MQRankSum=-1.892;QD=3.85;ReadPosRankSum=-2.052;VQSLOD=1.3776;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,10:20:4.12:0,4,55	0/0:4,0:3:9.02:0,9,165	0/0:69,1:14:39.13:0,39,770	0/0:73,0:14:39.60:0,40,701	0/0:15,0:14:33.11:0,33,784	0/0:15,0:15:38.16:0,38,845	0/0:17,1:17:44.89:0,45,910	0/0:16,0:16:48.16:0,48,1057	0/0:10,0:10:27.09:0,27,556	0/1:7,5:11:99:226,0,185	0/0:9,3:14:11.93:0,12,202	1/1:2,1:4:3.01:55,3,0	0/1:6,6:10:29.59:43,0,30	0/0:11,0:11:21.07:0,21,435	0/0:11,0:10:25.83:0,26,543	0/0:7,0:7:21.07:0,21,472	0/0:23,0:23:60.21:0,60,1387	0/1:12,1:12:44.95:45,0,247	0/0:10,0:8:24.08:0,24,472	0/0:12,0:11:30.10:0,30,684	0/0:36,0:33:84.27:0,84,1803	1/1:5,8:16:3.01:36,3,0	0/1:6,1:12:0:0,0,0	0/0:9,17:26:2.69:0,3,61	0/1:8,2:10:38.04:38,0,206	0/0:11,0:10:27.09:0,27,612	0/0:10,0:10:27.09:0,27,595	0/0:13,0:13:33.07:0,33,671
chr10	73439476	.	A	AGTGTGT	501.17	PASS	AB=0.988;AC=14;AF=0.269;AN=52;BaseQRankSum=3.549;DP=520;FS=9.985;HRun=0;HaplotypeScore=106.1293;InbreedingCoeff=0.5649;MQ=42.29;MQ0=35;MQRankSum=-4.087;QD=1.97;ReadPosRankSum=-1.844;VQSLOD=0.8045;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:19:2.71:19,0,3	0/0:5,0:4:9.02:0,9,137	0/1:78,0:18:1.51:2,0,187	0/1:79,0:18:73.46:73,0,103	0/0:11,0:11:24.06:0,24,426	0/0:13,0:13:30.08:0,30,572	0/0:19,0:18:21.04:0,21,345	0/0:17,0:19:33.53:0,34,560	0/0:8,0:8:21.06:0,21,388	1/1:11,0:10:17.47:158,17,0	./.	1/1:5,0:4:1.82:5,2,0	0/0:13,0:10:0:0,0,0	0/0:11,0:11:15.05:0,15,299	0/0:12,0:11:4.38:0,4,428	0/0:8,0:8:12.03:0,12,213	0/0:24,0:24:42.01:0,42,644	1/1:9,4:12:9.03:295,9,0	0/0:9,0:8:21.03:0,21,295	0/0:14,0:14:27.08:0,27,482	0/0:37,0:34:39.77:0,40,674	0/1:12,0:12:0:0,0,0	./.	1/1:28,0:27:2.47:16,2,0	1/1:9,0:8:6.01:77,6,0	0/0:13,0:12:24.03:0,24,389	0/0:9,0:9:15.03:0,15,259	0/0:13,0:13:27.05:0,27,465
chr10	73439781	.	T	TC	5062.02	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=0.197;DP=682;FS=2.780;HRun=1;HaplotypeScore=70.3759;InbreedingCoeff=0.9998;MQ=82.61;MQ0=0;MQRankSum=-0.247;QD=43.27;ReadPosRankSum=1.507;VQSLOD=5.0809;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,37:38:99:1593,102,0	0/0:11,0:11:33.11:0,33,462	0/0:32,0:32:93.30:0,93,1275	0/0:22,0:22:56.05:0,56,785	0/0:33,0:33:90.30:0,90,1243	0/0:21,0:20:57.19:0,57,797	0/0:20,0:20:60.18:0,60,820	0/0:30,0:30:87.24:0,87,1148	0/0:19,0:19:57.19:0,57,796	1/1:0,23:23:69.24:1097,69,0	1/1:0,17:17:48.16:767,48,0	0/0:24,0:24:72.24:0,72,1006	0/0:33,0:33:96.31:0,96,1325	0/0:29,0:29:87.25:0,87,1165	0/0:33,0:33:99:0,99,1368	0/0:34,0:34:99:0,102,1427	0/0:28,0:28:84.28:0,84,1175	1/1:0,14:14:36.11:551,36,0	0/0:20,0:20:60.20:0,60,831	0/0:22,0:22:66.22:0,66,922	0/0:18,0:18:54.18:0,54,753	0/0:25,0:25:63.21:0,63,879	0/0:24,0:24:69.23:0,69,965	0/0:16,0:16:45.15:0,45,629	1/1:2,23:25:66.23:1055,66,0	0/0:26,0:26:78.26:0,78,1088	0/0:35,0:34:99:0,105,1467	0/0:10,0:10:30.01:0,30,341
chr10	73440590	.	G	GT	1356.41	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-6.203;DP=660;FS=2.390;HRun=11;HaplotypeScore=69.5759;InbreedingCoeff=0.8643;MQ=75.44;MQ0=0;MQRankSum=-0.790;QD=16.54;ReadPosRankSum=-0.389;VQSLOD=4.4448;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,1:44:83.10:0,83,828	0/0:4,0:4:11.95:0,12,93	0/0:22,0:24:42.06:0,42,326	0/1:8,0:8:4.52:5,0,78	0/0:29,0:32:74.81:0,75,546	0/0:25,0:26:61.23:0,61,454	0/0:30,0:31:61.06:0,61,603	0/0:37,0:39:84.66:0,85,630	0/0:12,0:13:34.87:0,35,254	1/1:8,28:36:57.90:757,58,0	1/1:5,23:28:36.75:526,37,0	0/0:27,0:27:62.53:0,63,485	0/0:27,0:27:80.68:0,81,624	0/0:22,0:22:58.49:0,58,433	0/0:31,0:31:89.64:0,90,693	0/0:16,0:16:35.83:0,36,277	0/0:25,0:24:62.73:0,63,488	0/0:13,0:13:32.81:0,33,248	0/0:22,0:22:62.74:0,63,484	0/0:29,0:29:71.45:0,71,543	0/0:15,0:15:38.82:0,39,300	0/0:27,0:26:65.70:0,66,506	0/0:22,0:23:55.74:0,56,413	0/0:10,0:12:28.93:0,29,215	1/1:1,9:10:21.04:213,21,0	0/0:35,0:35:76.11:0,76,680	0/0:28,0:28:68.64:0,69,524	0/0:13,0:13:35.80:0,36,272
chr10	73442395	.	C	CA	2453.68	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-5.186;DP=590;FS=7.003;HRun=6;HaplotypeScore=67.3352;InbreedingCoeff=0.9894;MQ=76.19;MQ0=0;MQRankSum=-1.602;QD=27.88;ReadPosRankSum=1.547;VQSLOD=4.3382;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,138,1369	0/0:5,0:5:12.02:0,12,122	0/0:13,0:12:28.27:0,28,248	0/0:19,0:18:32.36:0,32,249	0/0:26,0:26:59.21:0,59,591	0/0:12,0:12:36.08:0,36,367	0/0:18,0:18:45.07:0,45,445	0/0:27,0:27:78.11:0,78,763	0/0:15,0:15:42.03:0,42,409	0/0:22,0:22:57.11:0,57,581	0/0:18,0:18:51.09:0,51,512	1/1:2,19:21:54.17:676,54,0	1/1:0,18:18:45.14:563,45,0	0/0:22,0:22:60.13:0,60,611	0/0:18,0:18:54.09:0,54,538	0/0:14,0:14:36.08:0,36,366	0/0:40,0:40:99:0,108,1081	0/0:17,0:17:49.05:0,49,264	0/0:20,0:20:51.08:0,51,502	0/0:19,0:19:45.08:0,45,446	0/0:56,0:56:99:0,165,1661	1/1:1,9:10:18.06:225,18,0	1/1:2,11:13:26.75:300,27,0	1/1:2,24:26:69.22:864,69,0	0/0:17,0:17:48.11:0,48,488	0/0:21,0:21:57.11:0,57,571	0/0:27,0:26:69.14:0,69,697	0/0:7,0:7:21.02:0,21,205
chr10	73443108	.	ACCAGGGT	A	1612.46	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.472;DP=836;FS=10.379;HRun=0;HaplotypeScore=188.1923;InbreedingCoeff=0.9996;MQ=88.67;MQ0=0;MQRankSum=-8.153;QD=55.60;ReadPosRankSum=-0.494;VQSLOD=2.9157;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:29:69.19:1707,69,0	0/0:13,0:13:39.13:0,39,1557	0/0:30,0:30:78.25:0,78,2868	0/0:34,0:34:93.32:0,93,3296	0/0:29,0:29:84.29:0,84,3328	0/0:20,0:20:57.20:0,57,2278	0/0:41,0:41:99:0,117,4615	0/0:33,0:33:87.28:0,87,3050	0/0:44,0:44:99:0,129,4966	0/0:23,0:23:66.23:0,66,2610	0/0:11,0:11:33.11:0,33,1274	0/0:30,0:30:87.30:0,87,3337	0/0:34,0:34:99:0,99,3840	0/0:27,0:27:81.28:0,81,3109	0/0:46,0:46:99:0,135,5176	0/0:37,0:37:99:0,108,4096	0/0:45,0:45:99:0,129,5042	0/0:29,0:29:81.28:0,81,3093	0/0:14,0:14:39.13:0,39,1307	0/0:27,0:27:75.24:0,75,2851	0/0:50,0:50:99:0,141,5475	0/0:22,0:22:66.22:0,66,2519	0/0:24,0:24:63.22:0,63,2507	0/0:38,0:37:99:0,111,4294	0/0:24,0:24:66.70:0,67,2529	0/0:29,0:30:90.31:0,90,3423	0/0:26,0:26:78.27:0,78,3036	0/0:26,0:26:69.24:0,69,2750
chr10	73443937	.	AT	A	847.31	PASS	AB=0.882;AC=17;AF=0.304;AN=56;BaseQRankSum=7.373;DP=284;FS=25.629;HRun=9;HaplotypeScore=48.7194;InbreedingCoeff=0.8292;MQ=89.39;MQ0=1;MQRankSum=-7.761;QD=13.45;ReadPosRankSum=0.613;VQSLOD=1.4601;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:6:14.32:0,14,77	0/0:1,0:1:3.01:0,3,35	0/0:23,0:19:23.93:0,24,267	0/0:25,0:22:10.75:0,11,199	0/0:13,0:14:35.92:0,36,385	0/0:18,0:18:48.14:0,48,554	0/0:9,0:9:27.08:0,27,312	0/0:19,0:19:42.12:0,42,484	0/0:5,0:5:15.04:0,15,173	1/1:2,9:11:27.01:246,27,0	1/1:0,5:5:12:109,12,0	1/1:1,6:7:15.01:135,15,0	1/1:1,5:6:15.01:136,15,0	0/0:7,0:7:17.89:0,18,187	0/0:5,0:5:12.04:0,12,139	0/0:7,0:7:18.05:0,18,208	0/0:16,0:16:37.82:0,38,448	0/0:5,0:12:21.35:0,21,101	0/0:15,0:15:45.12:0,45,509	0/1:12,2:15:15.98:16,0,322	0/0:4,0:4:12.04:0,12,138	1/1:1,3:4:9:82,9,0	1/1:0,4:4:12.01:109,12,0	1/1:2,3:5:12.01:109,12,0	1/1:2,3:5:11.99:103,12,0	0/0:14,0:14:39.12:0,39,450	0/0:13,0:12:33.10:0,33,380	0/0:7,0:7:21.06:0,21,242
chr10	73443950	.	GATTT	G	2267.54	PASS	AB=0.545;AC=19;AF=0.339;AN=56;BaseQRankSum=9.845;DP=268;FS=32.084;HRun=0;HaplotypeScore=53.7485;InbreedingCoeff=0.8571;MQ=70.80;MQ0=1;MQRankSum=-7.122;QD=35.99;ReadPosRankSum=-0.084;VQSLOD=1.5101;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:1,4:6:17.20:113,0,17	0/0:3,0:3:9.03:0,9,221	0/0:20,0:14:36.09:0,36,661	0/0:17,0:16:5.91:0,6,286	0/0:14,0:14:42.13:0,42,1115	0/0:16,0:16:48.13:0,48,1189	0/0:10,0:10:30.01:0,30,671	0/0:18,0:18:54.16:0,54,1276	0/0:4,0:4:12.03:0,12,284	1/1:3,8:11:32.76:556,33,0	1/1:0,6:6:17.74:232,18,0	1/1:1,4:5:14.97:261,15,0	1/1:2,6:8:18.03:293,18,0	0/0:6,0:6:18.05:0,18,458	0/0:4,0:4:12.01:0,12,223	0/0:6,0:6:18.05:0,18,459	0/0:14,0:14:42.09:0,42,1140	1/1:3,5:8:20.95:309,21,0	0/0:16,0:16:48.03:0,48,1064	0/0:14,0:14:42.12:0,42,1052	0/0:6,0:6:18.03:0,18,384	1/1:1,2:3:8.93:100,9,0	1/1:0,5:5:11.93:199,12,0	1/1:1,4:5:14.90:212,15,0	1/1:0,5:5:11.96:201,12,0	0/0:15,0:15:45.14:0,45,1143	0/0:12,0:11:36.11:0,36,972	0/0:9,0:9:27.08:0,27,694
chr10	73444017	.	G	GATTT	163.54	PASS	AB=1.000;AC=9;AF=0.321;AN=28;BaseQRankSum=-0.704;DP=155;FS=5.409;HRun=0;HaplotypeScore=28.7365;InbreedingCoeff=0.4177;MQ=55.94;MQ0=4;MQRankSum=-0.111;QD=6.06;ReadPosRankSum=-0.482;VQSLOD=0.4164;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	1/1:5,2:7:3.01:71,3,0	0/0:6,0:6:3.01:0,3,46	./.	0/0:5,0:5:9.03:0,9,139	./.	0/0:3,0:4:3:0,3,25	0/0:0,0:3:6.01:0,6,56	0/1:6,0:6:0:0,0,0	./.	0/0:3,0:3:3.01:0,3,46	./.	0/0:16,0:16:24.08:0,24,370	0/0:6,0:6:1.55:0,2,4	0/0:10,0:10:9.03:0,9,139	0/0:6,0:6:3.01:0,3,46	1/1:1,0:1:3.01:70,3,0	./.	./.	./.	./.	1/1:5,0:4:3.01:50,3,0	./.	1/1:4,4:8:3.01:71,3,0
chr10	73444226	.	CCACCCCCA	C	1219.07	PASS	AB=1.000;AC=11;AF=0.306;AN=36;BaseQRankSum=4.210;DP=86;FS=45.483;HRun=0;HaplotypeScore=40.1095;InbreedingCoeff=0.5970;MQ=79.76;MQ0=3;MQRankSum=-3.953;QD=42.04;ReadPosRankSum=0.601;VQSLOD=1.5054;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:3.01:72,3,0	./.	0/1:8,0:5:8.81:9,0,123	0/0:11,0:8:11.20:0,11,196	0/0:2,0:2:3.01:0,3,50	0/0:4,0:4:12:0,12,430	0/0:6,0:5:12.02:0,12,393	0/0:6,0:4:12.04:0,12,548	0/0:1,0:1:3.01:0,3,116	1/1:1,2:3:9.03:221,9,0	1/1:2,4:6:18.01:421,18,0	./.	./.	./.	./.	0/0:1,0:1:3.01:0,3,135	0/0:11,0:11:33.11:0,33,1269	1/1:1,3:4:9.03:253,9,0	0/0:4,0:4:12.04:0,12,537	./.	0/0:7,0:7:18.04:0,18,634	./.	./.	./.	1/1:1,6:7:18.01:377,18,0	0/0:1,0:1:0:0,0,0	0/0:2,0:2:6.02:0,6,271	./.
chr10	73444376	.	GCTTCCTAGGTAAGCGCTCTACCACTGAGCTAAATCCCCAGCCC	G	1534.06	PASS	AB=0.600;AC=9;AF=0.214;AN=42;BaseQRankSum=3.781;DP=207;FS=4.699;HRun=0;HaplotypeScore=180.3506;InbreedingCoeff=0.5578;MQ=43.61;MQ0=41;MQRankSum=-2.639;QD=191.76;ReadPosRankSum=2.581;VQSLOD=3.0908;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:2,0:2:6.02:0,6,679	./.	./.	0/0:9,0:9:24.08:0,24,3097	0/0:13,0:12:30.10:0,30,5663	0/0:15,0:12:36.12:0,36,4871	0/0:25,0:6:12:0,12,890	0/0:10,0:9:27.09:0,27,5212	./.	1/1:0,1:1:3.01:332,3,0	0/1:1,2:3:99:326,0,401	1/1:0,1:1:3.01:332,3,0	0/0:5,0:5:15.05:0,15,2951	0/0:16,0:15:36.12:0,36,6704	0/0:6,0:6:18.06:0,18,3036	0/0:27,0:23:63.22:0,63,9973	./.	0/0:10,0:9:27.09:0,27,1510	0/0:8,0:8:18.06:0,18,2498	0/0:30,0:15:39.09:0,39,4901	1/1:0,1:1:3.01:332,3,0	1/1:1,1:2:3.01:332,3,0	./.	./.	0/0:5,0:4:12.04:0,12,1519	0/0:7,0:6:18.06:0,18,2692	0/0:2,0:2:6.02:0,6,926
chr10	73445141	.	A	AAGTGTGGAG	19265.35	PASS	AB=0.971;AC=21;AF=0.375;AN=56;BaseQRankSum=-4.352;DP=662;FS=25.699;HRun=0;HaplotypeScore=171.7680;InbreedingCoeff=0.9228;MQ=85.28;MQ0=0;MQRankSum=-16.976;QD=76.45;ReadPosRankSum=1.835;VQSLOD=2.9145;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:22:52.06:2222,52,0	0/0:12,0:12:36.12:0,36,1097	0/0:23,0:23:63.06:0,63,1491	0/0:26,0:26:69.13:0,69,1754	0/0:22,0:22:66.19:0,66,1799	0/0:17,0:17:51.16:0,51,1438	0/0:26,0:26:78.27:0,78,2347	0/0:28,0:28:81.26:0,81,2206	0/0:36,0:36:96.32:0,96,2856	1/1:3,22:26:72.25:3024,72,0	1/1:3,11:13:24.08:1118,24,0	1/1:4,26:32:75.26:3570,75,0	1/1:5,19:30:57.20:2629,57,0	0/0:26,0:26:75.26:0,75,2272	0/0:32,0:32:90.31:0,90,2685	0/0:25,0:25:72.25:0,72,2231	0/0:31,0:31:90.27:0,90,2523	1/1:2,10:16:30.10:1318,30,0	0/0:19,0:19:51.17:0,51,1423	0/0:23,0:23:63.22:0,63,1812	0/0:26,0:26:78.27:0,78,2233	1/1:7,14:19:33.11:1428,33,0	1/1:2,13:17:36.12:1598,36,0	1/1:3,12:18:24.08:990,24,0	1/1:5,11:16:27.09:1319,27,0	0/1:32,1:33:49.78:50,0,2490	0/0:28,0:27:81.27:0,81,2359	0/0:10,0:10:30.10:0,30,931
chr10	73445388	.	AAC	A	322.84	PASS	AB=0.933;AC=17;AF=0.327;AN=52;BaseQRankSum=3.002;DP=653;FS=3.659;HRun=0;HaplotypeScore=99.7825;InbreedingCoeff=-0.0453;MQ=54.06;MQ0=27;MQRankSum=0.362;QD=1.02;ReadPosRankSum=1.469;VQSLOD=1.8822;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:29.78:0,30,358	0/0:11,0:11:14.97:0,15,155	./.	./.	0/1:12,3:15:75.04:75,0,80	0/1:18,0:19:25.51:26,0,144	0/1:24,0:24:6.71:7,0,228	0/0:27,0:27:16.15:0,16,137	0/1:22,2:24:29.33:29,0,287	1/1:16,0:16:5.68:28,6,0	1/1:12,0:12:3.48:12,3,0	0/0:23,0:23:32.44:0,32,336	0/0:16,0:16:18:0,18,166	0/0:15,0:16:9.16:0,9,77	0/1:32,1:35:58.65:59,0,577	0/1:23,0:23:59.87:60,0,186	0/1:23,1:24:31.12:31,0,103	0/0:18,0:17:27.05:0,27,304	0/0:13,0:12:6:0,6,53	0/1:23,0:22:61.11:61,0,87	0/1:39,2:41:28.94:29,0,315	0/0:12,0:12:8.93:0,9,75	0/0:17,0:16:8.79:0,9,111	0/0:29,0:25:14.70:0,15,159	1/1:19,0:19:10.29:46,10,0	0/1:16,1:16:11.52:12,0,218	0/1:18,5:22:5.51:6,0,287	0/0:14,0:14:26.95:0,27,278
chr10	73445427	.	ACACACAT	A	1900.50	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=5.997;DP=678;FS=1.460;HRun=0;HaplotypeScore=157.7561;InbreedingCoeff=0.2785;MQ=59.65;MQ0=22;MQRankSum=1.040;QD=8.37;ReadPosRankSum=-0.449;VQSLOD=2.1199;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:42:99:362,0,793	0/0:11,0:11:28.44:0,28,720	0/0:23,0:13:38.93:0,39,411	0/0:24,0:10:26.61:0,27,260	0/0:22,0:22:60.13:0,60,901	0/0:18,0:18:46.01:0,46,947	0/0:30,0:30:56.79:0,57,1574	0/0:39,0:38:99:0,102,1418	0/0:25,0:25:60.20:0,60,1497	1/1:6,18:24:35.39:442,35,0	1/1:1,10:11:9.01:172,9,0	0/1:28,0:26:99:138,0,771	0/1:15,0:14:79:79,0,394	0/0:20,0:20:50.81:0,51,847	0/0:38,0:37:99:0,100,2577	0/0:24,0:24:34.03:0,34,1218	0/0:22,0:22:47.21:0,47,935	0/1:21,0:18:99:167,0,686	0/0:10,0:9:26.82:0,27,432	0/0:30,0:28:31.80:0,32,906	0/0:49,0:49:99:0,126,2762	0/1:22,0:18:99:138,0,171	0/1:19,0:15:81.61:82,0,345	0/1:29,0:25:99:128,0,416	1/1:1,15:16:15.04:362,15,0	0/0:22,0:21:55.72:0,56,1092	0/0:23,0:23:55.61:0,56,1262	0/0:20,0:20:60.20:0,60,1411
chr10	73445433	.	AT	A	2495.28	PASS	AB=0.906;AC=21;AF=0.375;AN=56;BaseQRankSum=8.366;DP=637;FS=1.361;HRun=9;HaplotypeScore=87.8614;InbreedingCoeff=0.9454;MQ=65.57;MQ0=12;MQRankSum=-2.093;QD=10.48;ReadPosRankSum=2.668;VQSLOD=2.8607;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,31:40:80:739,80,0	0/0:11,0:11:28.41:0,28,301	0/0:22,0:15:44.94:0,45,475	0/0:26,0:17:38.44:0,38,367	0/0:20,0:20:42.10:0,42,468	0/0:18,0:18:34.04:0,34,377	0/0:26,2:28:41.75:0,42,713	0/0:34,0:32:66.11:0,66,745	0/0:23,0:23:54.16:0,54,617	1/1:24,0:24:41.91:367,42,0	1/1:10,0:11:8.99:80,9,0	1/1:12,13:24:29.82:288,30,0	1/1:4,7:13:20.05:172,20,0	0/0:23,0:24:59.80:0,60,643	0/0:38,0:38:88.31:0,88,941	0/0:19,1:20:19.33:0,19,434	0/0:19,0:19:42.12:0,42,481	1/1:6,12:16:33:301,33,0	0/0:10,0:9:26.82:0,27,268	0/1:26,3:28:0.32:0,0,483	0/0:41,0:41:99:0,99,1134	1/1:6,16:19:25.18:237,25,0	1/1:3,12:11:19.73:189,20,0	1/1:4,14:17:23.29:218,23,0	1/1:16,0:16:14.94:119,15,0	0/0:22,0:21:45.13:0,45,515	0/0:22,0:22:39.10:0,39,441	0/0:21,0:21:48.12:0,48,542
chr10	73446120	.	C	CTA	756.64	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.330;DP=437;FS=0.987;HRun=0;HaplotypeScore=51.5944;InbreedingCoeff=0.9341;MQ=77.48;MQ0=0;MQRankSum=-1.095;QD=42.04;ReadPosRankSum=1.995;VQSLOD=4.9733;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.15:0,96,1292	0/0:7,0:7:21.07:0,21,289	0/0:10,0:10:27.03:0,27,332	0/0:8,0:8:11.22:0,11,192	0/0:24,0:24:66.15:0,66,868	0/0:20,0:20:60.20:0,60,825	0/0:6,0:6:18.06:0,18,247	0/0:29,0:29:75.24:0,75,1016	0/0:14,0:14:36.11:0,36,480	0/0:20,0:20:60.20:0,60,825	0/0:11,0:11:30.08:0,30,382	0/0:13,0:13:33.11:0,33,454	0/0:6,0:6:18.05:0,18,233	0/0:9,0:9:27.09:0,27,371	0/0:9,0:9:27.09:0,27,370	0/0:19,0:19:54.17:0,54,728	0/0:17,0:17:48.14:0,48,642	1/1:0,18:18:48.16:851,48,0	0/0:21,0:21:57.19:0,57,783	0/0:19,0:19:48.15:0,48,646	0/0:7,0:7:18.06:0,18,247	0/0:12,0:12:33.10:0,33,438	0/0:14,0:14:42.13:0,42,561	0/0:14,0:14:30.09:0,30,398	0/0:29,0:29:87.29:0,87,1195	0/0:20,0:20:57.18:0,57,756	0/0:19,0:18:54.18:0,54,742	0/0:10,0:10:27.09:0,27,371
chr10	73446303	.	T	TA	2153.02	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-6.869;DP=527;FS=6.442;HRun=6;HaplotypeScore=54.9345;InbreedingCoeff=0.8770;MQ=78.83;MQ0=1;MQRankSum=-0.086;QD=23.92;ReadPosRankSum=0.574;VQSLOD=3.0683;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.22:0,96,978	0/0:3,0:3:6.01:0,6,61	0/0:15,1:16:33.04:0,33,321	0/1:16,0:15:8.08:8,0,184	0/0:36,0:36:99:0,102,1029	0/0:22,0:22:63.12:0,63,634	0/0:7,0:7:18.04:0,18,183	0/0:35,0:35:84.16:0,84,847	0/0:10,0:10:27.05:0,27,270	0/0:23,0:23:66.11:0,66,649	0/0:26,0:26:72.07:0,72,719	1/1:1,11:12:27.09:341,27,0	1/1:0,13:13:36.12:454,36,0	0/0:14,0:14:39.06:0,39,389	0/0:21,0:20:54.10:0,54,544	0/0:18,0:18:54.07:0,54,526	0/0:23,0:23:69.13:0,69,695	0/0:19,0:19:57.08:0,57,564	0/0:19,0:19:51.06:0,51,487	0/0:25,0:25:75.16:0,75,758	0/0:7,0:7:21.03:0,21,204	1/1:1,15:16:44.93:506,45,0	1/1:1,18:19:45.14:568,45,0	1/1:1,13:14:36.12:454,36,0	0/0:22,0:22:63.12:0,63,631	0/0:24,0:24:63.13:0,63,637	0/0:22,0:22:60.10:0,60,597	0/0:12,0:12:36.08:0,36,367
chr10	73446604	.	A	AAAC	9542.30	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=3.051;DP=792;FS=1.062;HRun=0;HaplotypeScore=126.2446;InbreedingCoeff=0.9947;MQ=87.67;MQ0=0;MQRankSum=-3.265;QD=43.18;ReadPosRankSum=1.172;VQSLOD=6.5276;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:90.30:0,90,1336	0/0:4,0:4:12.04:0,12,178	0/0:32,0:31:57.19:0,57,838	0/0:28,0:29:60.13:0,60,815	0/0:38,0:38:99:0,102,1475	0/0:25,0:25:63.21:0,63,929	0/0:24,0:24:60.20:0,60,890	0/0:25,0:25:57.18:0,57,824	0/0:27,0:27:69.23:0,69,1016	1/1:8,18:26:57.20:1155,57,0	1/1:10,20:30:54.14:1020,54,0	1/1:4,32:36:93.32:1930,93,0	1/1:6,23:29:72.25:1486,72,0	0/0:22,0:23:60.12:0,60,806	0/0:34,0:34:90.28:0,90,1293	0/0:29,0:29:69.22:0,69,997	0/0:36,0:35:87.26:0,87,1249	0/0:29,0:29:72.18:0,72,1023	0/0:35,0:35:87.28:0,87,1243	0/0:26,0:26:75.22:0,75,1051	0/0:38,0:38:93.29:0,93,1351	1/1:5,12:19:30.99:573,31,0	1/1:3,15:19:36.12:741,36,0	1/1:6,31:37:37.23:1538,37,0	1/1:5,19:25:54.18:1100,54,0	0/0:37,0:37:93.31:0,93,1380	0/0:22,0:22:57.19:0,57,842	0/0:14,0:14:30.37:0,30,523
chr10	73446802	.	C	CTATT	11441.24	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-12.277;DP=606;FS=21.013;HRun=0;HaplotypeScore=92.2695;InbreedingCoeff=0.9981;MQ=81.83;MQ0=0;MQRankSum=-4.498;QD=66.91;ReadPosRankSum=1.693;VQSLOD=5.0886;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.26:0,96,1737	0/0:8,0:8:24.07:0,24,432	0/0:18,0:17:42.11:0,42,705	0/0:23,0:23:45.57:0,46,776	0/0:24,0:24:72.21:0,72,1357	0/0:21,0:21:60.21:0,60,1163	0/0:12,0:12:36.09:0,36,630	0/0:38,0:38:99:0,99,1735	0/0:18,0:18:48.16:0,48,902	1/1:2,27:29:81.01:2083,81,0	1/1:2,22:24:72.05:1721,72,0	1/1:1,20:23:51.17:1353,51,0	1/1:2,22:24:66.15:1678,66,0	0/0:16,0:16:39.12:0,39,722	0/0:14,0:14:42.14:0,42,782	0/0:26,0:26:75.24:0,75,1410	0/0:30,0:30:79.09:0,79,1410	0/0:24,0:24:72.23:0,72,1360	0/0:27,0:27:80.86:0,81,1489	0/0:21,0:21:60.17:0,60,1065	0/0:26,0:26:69.22:0,69,1289	1/1:0,8:10:17.93:365,18,0	1/1:0,15:15:45.15:1231,45,0	1/1:0,18:19:45.15:1206,45,0	1/1:2,24:27:69.19:1804,69,0	0/0:33,0:33:96.31:0,96,1767	0/0:14,0:14:42.13:0,42,781	0/0:10,0:10:30.10:0,30,579
chr10	73446976	.	G	GC	1535.86	PASS	AB=0.988;AC=15;AF=0.268;AN=56;BaseQRankSum=1.852;DP=497;FS=2.814;HRun=8;HaplotypeScore=63.9372;InbreedingCoeff=0.5859;MQ=80.89;MQ0=1;MQRankSum=0.256;QD=8.35;ReadPosRankSum=-1.065;VQSLOD=1.0899;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:10,1:34:39.87:204,40,0	0/0:6,0:6:15.01:0,15,137	0/1:20,0:19:4.60:5,0,147	0/0:18,0:15:14.37:0,14,90	0/0:22,0:22:59.99:0,60,538	0/0:22,0:22:54.62:0,55,523	0/0:18,0:18:47.99:0,48,430	0/0:22,0:24:5.95:0,6,240	0/0:17,0:17:38.97:0,39,343	1/1:2,16:18:47.29:491,47,0	1/1:2,15:18:41.44:389,41,0	0/1:15,0:15:6.91:7,0,51	0/0:12,0:12:13.31:0,13,38	0/0:19,0:19:48.01:0,48,434	0/0:14,0:14:39.02:0,39,356	0/0:15,0:15:42:0,42,377	0/0:27,0:27:74.96:0,75,664	1/1:5,1:20:37.18:209,37,0	0/0:20,0:20:47.96:0,48,417	0/0:17,0:17:38.97:0,39,345	0/0:14,0:14:36:0,36,325	0/1:15,1:16:18.91:79,0,19	0/1:8,0:8:1.90:39,0,2	0/1:24,0:24:20.39:20,0,25	1/1:0,11:11:24.07:277,24,0	0/0:14,1:15:7.41:0,7,320	0/0:11,0:11:23.99:0,24,215	0/0:21,0:21:56.96:0,57,498
chr10	73447827	.	GCCTCAGGCTGCATGTGTGACTGCCTGCCTGCCCTAA	G	1898.23	PASS	AB=0.896;AC=12;AF=0.214;AN=56;BaseQRankSum=5.579;DP=575;FS=17.722;HRun=0;HaplotypeScore=478.9374;InbreedingCoeff=0.5786;MQ=71.12;MQ0=0;MQRankSum=-1.905;QD=15.82;ReadPosRankSum=1.743;VQSLOD=-0.0386;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:47.82:0,48,1712	0/0:9,0:9:17.99:0,18,711	0/0:16,0:15:1.93:0,2,358	0/1:18,0:16:13.02:13,0,585	0/0:9,0:9:24.08:0,24,662	0/0:18,0:18:43.39:0,43,1218	0/0:40,0:40:99:0,114,4588	0/0:21,0:21:45.63:0,46,1177	0/0:35,0:35:87.29:0,87,3885	0/1:17,0:16:1.40:1,0,464	0/0:7,0:7:8.47:0,8,152	1/1:18,0:18:33.11:831,33,0	1/1:18,0:18:35.99:761,36,0	0/0:40,0:40:93.32:0,93,4373	0/0:28,0:28:66.23:0,66,3403	0/0:15,0:15:33.11:0,33,1760	0/0:17,0:17:45.15:0,45,2267	0/0:17,0:17:33.47:0,33,1209	0/1:22,0:22:21.47:21,0,985	0/0:14,0:14:29.84:0,30,1245	0/0:71,0:70:99:0,193,7312	0/1:2,5:7:0:0,0,0	1/1:2,0:2:3.01:45,3,0	1/1:18,0:18:19.35:382,19,0	0/0:17,0:17:18.34:0,18,551	0/0:24,0:24:52.61:0,53,1927	0/0:21,0:21:54.18:0,54,2380	0/0:3,0:3:6.02:0,6,315
chr10	73447846	.	ACTGC	A	293.75	PASS	AB=0.744;AC=3;AF=0.058;AN=52;BaseQRankSum=5.591;DP=561;FS=6.122;HRun=0;HaplotypeScore=112.0592;InbreedingCoeff=-0.0648;MQ=70.03;MQ0=0;MQRankSum=-5.804;QD=4.82;ReadPosRankSum=-1.014;VQSLOD=1.8396;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:81.28:0,81,2028	0/0:9,0:9:24.08:0,24,589	0/0:19,0:18:33.09:0,33,700	0/0:19,0:17:36.11:0,36,763	0/0:10,0:10:24.08:0,24,585	0/0:15,0:15:27.09:0,27,642	0/0:40,0:40:99:0,105,2534	0/0:28,0:28:66.19:0,66,1635	0/0:32,0:32:84.27:0,84,2091	0/0:13,0:12:27.09:0,27,672	0/0:4,0:3:9.03:0,9,231	0/1:15,8:23:99:180,0,766	0/1:14,7:21:99:166,0,578	0/0:32,0:32:90.30:0,90,2165	0/0:23,0:23:63.22:0,63,1612	0/0:11,0:11:30.10:0,30,770	0/0:18,0:18:48.16:0,48,1159	0/0:14,0:14:42.08:0,42,967	0/0:16,0:16:21.07:0,21,524	0/0:15,0:15:39.13:0,39,955	0/0:84,0:83:99:0,189,4871	./.	./.	0/1:11,6:17:47.49:47,0,363	0/0:13,0:13:30.10:0,30,767	0/0:21,0:21:51.17:0,51,1280	0/0:18,0:18:48.16:0,48,1231	0/0:5,0:5:15.03:0,15,324
chr10	73448432	.	AACAACAACAACACACAC	A	393.38	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=2.541;DP=465;FS=6.612;HRun=0;HaplotypeScore=155.6989;InbreedingCoeff=0.4637;MQ=54.81;MQ0=32;MQRankSum=0.227;QD=5.18;ReadPosRankSum=-1.306;VQSLOD=1.9032;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:14:2.43:134,2,0	0/0:7,0:7:21.07:0,21,819	0/0:40,0:14:4.31:0,4,885	0/0:35,0:18:42.14:0,42,1247	0/0:19,0:17:46.93:0,47,2265	0/0:9,0:8:22.63:0,23,773	0/0:33,0:29:73.80:0,74,2689	0/0:25,0:24:59.23:0,59,1957	0/0:7,0:7:21.06:0,21,643	0/0:8,0:5:12.01:0,12,187	0/0:6,0:5:13.91:0,14,149	0/1:8,0:8:17.82:18,0,71	0/0:7,0:6:2.98:0,3,21	0/0:13,0:12:33.11:0,33,1554	0/0:16,0:16:39.12:0,39,1673	0/0:15,0:15:40.37:0,40,1333	0/0:26,0:26:72.22:0,72,3050	1/1:4,16:20:9.03:344,9,0	0/0:17,0:15:36.08:0,36,1362	0/0:14,0:14:38.16:0,38,1484	0/0:27,0:21:52.06:0,52,2268	0/0:7,0:7:6.48:0,6,56	0/0:8,0:8:3.48:0,3,78	0/1:26,0:25:1.67:14,0,2	0/0:11,0:11:9.03:0,9,230	0/0:16,0:16:39.13:0,39,1757	0/0:16,0:14:36.12:0,36,1223	0/0:7,0:7:21.07:0,21,1420
chr10	73448435	.	AACAACAACACAC	A	455.79	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=3.816;DP=455;FS=2.389;HRun=0;HaplotypeScore=120.2622;InbreedingCoeff=0.6542;MQ=54.31;MQ0=33;MQRankSum=-1.282;QD=4.95;ReadPosRankSum=-2.462;VQSLOD=1.4776;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:11:8.63:33,9,0	0/0:8,0:8:22.21:0,22,514	0/0:36,0:13:27.67:0,28,529	0/0:32,0:16:42.11:0,42,794	0/0:20,0:18:46.55:0,47,1556	0/0:9,0:8:21.96:0,22,496	0/0:31,0:27:62.65:0,63,1640	0/0:21,0:20:53.66:0,54,1248	0/0:7,0:7:15.05:0,15,378	0/0:8,0:5:4.26:0,4,53	0/1:7,0:6:15.57:16,0,24	1/1:7,0:7:6.73:140,7,0	1/1:1,0:5:3.01:54,3,0	0/0:12,0:11:33.11:0,33,1058	0/0:15,0:15:37.37:0,37,1156	0/0:15,0:15:35.40:0,35,844	0/0:27,0:27:70.38:0,70,2021	1/1:19,0:19:12.04:250,12,0	0/0:17,0:15:26.48:0,26,852	0/0:17,0:17:38.31:0,38,1004	0/0:29,0:22:51.63:0,52,1523	1/1:7,0:7:0.34:2,0,0	0/0:0,0:8:2.03:0,2,4	1/1:6,20:26:0.88:109,1,0	0/0:11,0:11:6.49:0,6,92	0/0:17,0:17:39.13:0,39,1236	0/0:14,0:12:30.10:0,30,747	0/0:7,0:7:21.07:0,21,986
chr10	73448437	.	CAACA	C	153.09	PASS	AB=0.908;AC=8;AF=0.143;AN=56;BaseQRankSum=3.404;DP=451;FS=0.000;HRun=0;HaplotypeScore=73.5510;InbreedingCoeff=0.2777;MQ=52.73;MQ0=35;MQRankSum=-0.244;QD=1.78;ReadPosRankSum=-1.733;VQSLOD=0.7088;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,1:9:6.81:29,7,0	0/0:8,0:8:18.79:0,19,337	0/0:34,0:11:27.67:0,28,529	0/0:32,0:16:42:0,42,794	0/0:20,0:18:49.71:0,50,936	0/0:9,0:8:22.89:0,23,442	0/0:30,0:26:63.57:0,64,1299	0/0:20,0:19:54.23:0,54,1249	0/0:7,0:6:15.05:0,15,367	0/0:9,0:6:4.26:0,4,53	0/1:7,0:6:13.66:14,0,27	0/1:4,4:8:11.65:129,0,12	1/1:6,0:5:3.01:38,3,0	0/0:12,0:11:33.11:0,33,827	0/0:15,0:15:40.37:0,40,846	0/0:16,0:16:38.30:0,38,767	0/0:27,0:27:26.75:0,27,1343	0/1:19,0:19:18.50:44,0,18	0/0:15,0:13:26.91:0,27,638	0/0:17,0:17:41.31:0,41,814	0/0:32,0:24:16.22:0,16,1036	0/0:2,5:7:1.01:0,1,3	0/0:8,0:8:2.50:0,2,9	0/1:28,1:28:22.93:28,0,23	0/0:10,0:10:5.75:0,6,52	0/0:16,0:16:36.12:0,36,913	0/0:14,0:12:30.10:0,30,669	0/0:7,0:7:21.07:0,21,541
chr10	73448438	.	AACAACAC	A	557.05	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=4.850;DP=449;FS=4.210;HRun=0;HaplotypeScore=88.6456;InbreedingCoeff=0.6376;MQ=52.36;MQ0=36;MQRankSum=0.079;QD=4.39;ReadPosRankSum=-2.578;VQSLOD=1.3042;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:9:5.65:80,6,0	0/1:8,0:8:13.57:14,0,235	0/0:34,0:11:18.52:0,19,241	0/0:31,0:16:27.05:0,27,337	0/0:21,0:19:44.80:0,45,894	0/0:10,0:9:18.49:0,18,216	0/0:28,0:24:24.15:0,24,839	0/0:20,0:19:14.95:0,15,594	0/0:7,0:5:15.05:0,15,201	0/1:8,0:5:8.06:31,0,8	1/1:7,0:6:2.84:68,3,0	1/1:8,0:8:11.78:115,12,0	1/1:6,0:5:3.01:56,3,0	0/0:13,0:12:33.11:0,33,604	0/0:15,0:15:5.46:0,5,655	0/0:15,0:15:34.83:0,35,411	0/0:27,0:27:23.49:0,23,1001	1/1:19,0:19:12.03:157,12,0	0/0:15,0:13:23.64:0,24,448	0/0:17,0:17:34.48:0,34,529	0/0:32,0:24:49.08:0,49,803	1/1:7,0:7:0.02:1,0,0	1/1:8,0:8:2.67:40,3,0	1/1:29,0:28:8.01:128,8,0	1/1:3,7:10:2.38:39,2,0	0/0:17,0:17:40.95:0,41,701	0/0:12,0:10:27.07:0,27,379	0/0:7,0:7:21.07:0,21,569
chr10	73448669	.	TA	T	5934.46	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.689;DP=589;FS=2.575;HRun=1;HaplotypeScore=60.3150;InbreedingCoeff=0.9824;MQ=82.02;MQ0=0;MQRankSum=-1.029;QD=36.63;ReadPosRankSum=2.632;VQSLOD=5.2848;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.31:0,90,1439	0/0:12,0:12:33.11:0,33,528	0/0:21,0:20:43.08:0,43,778	0/0:14,0:14:38.33:0,38,555	0/0:19,0:19:53.95:0,54,839	0/0:24,0:24:72.25:0,72,1151	0/0:22,0:22:66.23:0,66,1051	0/0:27,0:27:81.27:0,81,1273	0/0:19,0:19:57.18:0,57,886	1/1:0,23:23:63.20:859,63,0	1/1:0,10:10:30.10:419,30,0	1/1:0,17:17:42.14:587,42,0	1/1:0,26:26:69.23:965,69,0	0/0:27,0:27:78.27:0,78,1243	0/0:21,0:21:63.20:0,63,984	0/0:26,0:26:75.24:0,75,1176	0/0:34,0:34:99:0,99,1550	0/0:32,0:32:96.33:0,96,1520	0/0:12,0:12:36.11:0,36,554	0/0:16,0:16:48.16:0,48,766	0/0:26,0:26:78.27:0,78,1238	1/1:0,14:14:33.11:461,33,0	1/1:0,29:29:78.26:1090,78,0	1/1:0,28:28:69.23:965,69,0	1/1:0,15:15:42.14:587,42,0	0/0:26,1:27:36.27:0,36,1114	0/0:15,0:15:45.12:0,45,668	0/0:2,0:2:6.02:0,6,96
chr10	73448936	.	C	CAA	4146.87	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-1.114;DP=708;FS=6.198;HRun=9;HaplotypeScore=90.6372;InbreedingCoeff=0.9941;MQ=83.09;MQ0=0;MQRankSum=0.200;QD=23.83;ReadPosRankSum=-0.068;VQSLOD=3.0180;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,105,1117	0/0:10,0:10:30.08:0,30,319	0/0:20,0:20:26.06:0,26,408	0/0:19,0:19:37.02:0,37,342	0/0:36,0:37:86.90:0,87,905	0/0:21,0:21:54.11:0,54,575	0/0:30,0:30:78.15:0,78,813	0/0:36,0:36:87.16:0,87,918	0/0:28,0:28:48.56:0,49,711	1/1:0,0:15:37.81:146,38,0	1/1:1,0:20:45.86:177,46,0	1/1:5,25:31:60.20:924,60,0	1/1:5,16:21:23.75:334,24,0	0/0:34,0:34:84.11:0,84,875	0/0:28,0:28:75.17:0,75,798	0/0:24,0:24:63.14:0,63,664	0/0:33,0:33:93.21:0,93,990	0/0:37,0:37:90.17:0,90,958	0/0:22,0:22:54.09:0,54,562	0/0:32,0:32:84.20:0,84,894	0/0:26,0:27:62.85:0,63,643	1/1:2,10:15:37.59:477,38,0	1/1:5,15:23:50.66:744,51,0	1/1:3,27:32:83.26:1218,83,0	1/1:0,0:17:37.15:127,37,0	0/0:27,0:27:72.16:0,72,766	0/0:24,0:25:71.92:0,72,746	0/0:4,0:4:12.03:0,12,128
chr10	73451336	.	C	CAAAA	2223.41	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.905;DP=486;FS=31.150;HRun=10;HaplotypeScore=103.8733;InbreedingCoeff=0.8599;MQ=59.52;MQ0=7;MQRankSum=-4.808;QD=30.05;ReadPosRankSum=0.524;VQSLOD=0.0407;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,2:34:66.04:839,66,0	0/0:7,0:6:12.04:0,12,170	0/0:11,0:10:0.16:0,0,103	0/0:12,0:9:3:0,3,115	0/0:24,0:25:61.43:0,61,834	0/0:20,0:20:57.16:0,57,770	0/0:19,0:17:45.11:0,45,632	0/0:26,0:25:53.94:0,54,761	0/0:14,0:15:39.11:0,39,533	1/1:5,9:15:36.10:746,36,0	1/1:6,5:10:11.62:250,12,0	0/0:15,0:12:24.46:0,24,277	0/0:8,0:8:21.06:0,21,256	0/0:17,0:18:37.25:0,37,474	0/0:20,0:21:36.05:0,36,500	0/0:27,0:24:66.19:0,66,934	0/0:33,0:34:73.88:0,74,1145	0/0:3,0:16:11.13:0,11,28	0/0:17,0:15:37.34:0,37,494	0/0:19,0:21:43.29:0,43,574	0/0:8,0:7:21.05:0,21,276	0/0:12,0:11:24.04:0,24,287	0/0:13,0:13:30.01:0,30,338	0/0:19,0:19:48.10:0,48,572	1/1:3,6:12:27.09:544,27,0	0/0:18,0:18:36.08:0,36,493	0/0:18,0:20:40.17:0,40,491	0/0:10,0:10:24.04:0,24,340
chr10	73451689	.	T	TAAGCA	9695.90	PASS	AB=0.749;AC=18;AF=0.346;AN=52;BaseQRankSum=11.664;DP=660;FS=53.782;HRun=0;HaplotypeScore=112.3775;InbreedingCoeff=0.8220;MQ=28.96;MQ0=131;MQRankSum=-3.026;QD=46.61;ReadPosRankSum=1.756;VQSLOD=2.3844;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:14:30.06:751,30,0	0/0:13,0:11:15.05:0,15,348	./.	./.	0/0:34,0:24:48.16:0,48,1060	0/0:25,0:21:30.10:0,30,656	0/0:20,0:17:36.12:0,36,836	0/0:38,0:18:51.02:0,51,928	0/0:24,0:20:39.13:0,39,906	1/1:6,14:17:42.14:1369,42,0	1/1:4,9:13:27.09:824,27,0	1/1:5,14:18:39.13:1293,39,0	0/1:5,12:15:18.56:961,0,19	0/0:19,0:17:36.12:0,36,836	0/0:26,0:23:42.14:0,42,910	0/0:27,0:24:48.05:0,48,1115	0/0:42,0:26:60.20:0,60,1309	0/0:38,0:19:30.10:0,30,697	0/0:19,0:12:36.08:0,36,755	0/0:39,0:37:93.32:0,93,2062	0/0:51,0:26:29.65:0,30,659	1/1:4,10:15:27.09:888,27,0	1/1:3,15:16:45.15:1488,45,0	1/1:11,7:9:18.06:585,18,0	1/1:4,16:18:45.15:1492,45,0	0/1:23,2:19:45.43:45,0,1133	0/0:24,0:19:42.14:0,42,976	0/0:13,0:8:12.03:0,12,279
chr10	73452136	.	TA	T	447.56	PASS	AB=0.929;AC=4;AF=0.071;AN=56;BaseQRankSum=1.662;DP=560;FS=2.115;HRun=12;HaplotypeScore=78.9768;InbreedingCoeff=0.3031;MQ=64.31;MQ0=0;MQRankSum=2.348;QD=8.14;ReadPosRankSum=2.472;VQSLOD=2.8546;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,31:41:33.70:533,34,0	0/0:10,1:11:0.81:0,1,190	0/0:11,0:9:3.01:0,3,31	0/1:4,1:5:17.23:17,0,21	0/0:33,1:35:54.68:0,55,694	0/0:27,0:28:46.84:0,47,572	0/0:17,0:17:33.03:0,33,324	0/0:23,1:24:24.81:0,25,412	0/0:13,0:13:30.01:0,30,289	0/0:16,0:31:61.75:0,62,360	0/0:5,0:17:37.50:0,37,217	0/0:13,0:13:21.49:0,21,202	0/0:13,0:13:27.05:0,27,274	0/0:11,1:12:3.81:0,4,216	0/0:23,0:23:54.01:0,54,516	0/0:19,0:20:35.91:0,36,349	0/0:17,3:20:4.59:0,5,395	0/0:17,2:19:1.56:0,2,362	0/0:14,0:14:24.05:0,24,244	0/0:32,0:32:60.07:0,60,592	0/1:8,0:8:2.04:2,0,149	0/0:23,0:23:42.51:0,43,410	0/0:21,1:22:12.80:0,13,302	0/0:25,0:24:59.99:0,60,608	0/0:5,0:16:22.73:0,23,114	0/0:26,0:27:59.92:0,60,572	0/0:21,0:21:43:0,43,574	0/0:17,1:18:21.84:0,22,397
chr10	73452299	.	CAT	C	1404.47	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.274;DP=548;FS=12.391;HRun=0;HaplotypeScore=71.5370;InbreedingCoeff=0.9115;MQ=59.47;MQ0=4;MQRankSum=-0.397;QD=36.01;ReadPosRankSum=0.079;VQSLOD=5.2134;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,108,1939	0/0:5,0:5:12.04:0,12,220	0/0:15,0:9:27.09:0,27,488	0/0:12,0:7:21:0,21,335	0/0:22,0:22:47.99:0,48,836	0/0:19,0:19:57.20:0,57,1037	0/0:26,0:26:69.24:0,69,1229	0/0:37,0:37:99:0,105,1897	0/0:17,0:17:45.15:0,45,825	1/1:0,16:16:48.16:688,48,0	1/1:0,12:12:27.09:386,27,0	0/0:21,0:21:51.17:0,51,917	0/0:15,0:15:39.13:0,39,714	0/0:25,0:25:66.23:0,66,1164	0/0:13,0:13:39.12:0,39,679	0/0:19,0:19:54.19:0,54,990	0/0:32,0:32:84.29:0,84,1522	0/0:16,0:16:39.13:0,39,666	0/0:18,0:17:45.15:0,45,788	0/0:19,0:19:51.17:0,51,932	0/0:41,0:41:99:0,114,2086	0/0:19,0:19:54.19:0,54,982	0/0:21,0:21:45.14:0,45,772	0/0:18,0:18:51.14:0,51,869	1/1:0,11:11:33.11:473,33,0	0/0:14,1:15:2.15:0,2,727	0/0:19,0:19:54.19:0,54,989	0/0:5,0:5:12.04:0,12,210
chr10	73452497	.	TTCTC	T	103.11	PASS	AB=1.000;AC=12;AF=0.375;AN=32;BaseQRankSum=0.679;DP=471;FS=5.798;HRun=0;HaplotypeScore=92.6060;InbreedingCoeff=0.2994;MQ=54.01;MQ0=15;MQRankSum=0.498;QD=0.95;ReadPosRankSum=1.493;VQSLOD=1.3829;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:14,0:13:6.02:72,6,0	./.	./.	./.	0/0:17,0:16:3.01:0,3,36	0/0:20,0:20:5.98:0,6,71	0/0:30,0:29:3.53:0,4,9	./.	1/1:14,0:14:6.01:70,6,0	./.	1/1:13,0:13:1.95:6,2,0	0/0:13,0:13:3.01:0,3,36	./.	./.	0/0:10,0:9:0:0,0,0	0/1:22,0:21:27.95:28,0,62	0/0:9,0:7:9.03:0,9,127	./.	./.	0/0:22,0:21:3.01:0,3,31	1/1:13,0:12:1.55:4,2,0	0/1:16,0:15:4.96:23,0,5	1/1:17,0:15:1.53:5,2,0	./.	0/0:21,0:19:1.25:0,1,3	0/0:15,0:14:15.93:0,16,189	./.
chr10	73453089	.	C	CG	6968.26	PASS	AC=50;AF=0.962;AN=52;BaseQRankSum=-1.635;DP=225;FS=16.347;HRun=2;HaplotypeScore=49.5669;InbreedingCoeff=0.6359;MQ=44.58;MQ0=3;MQRankSum=-2.435;QD=33.83;ReadPosRankSum=0.307;VQSLOD=2.9848;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:7:18.03:176,18,0	1/1:0,4:4:11.87:143,12,0	0/0:7,3:2:5.75:0,6,49	./.	1/1:0,6:6:15.05:214,15,0	1/1:0,12:12:33.11:472,33,0	1/1:0,8:8:18.06:257,18,0	1/1:1,10:11:29.87:354,30,0	1/1:0,9:9:27.09:386,27,0	1/1:1,5:5:15.05:214,15,0	1/1:0,9:9:26.45:351,26,0	1/1:1,11:12:30.10:428,30,0	1/1:1,9:10:23.87:312,24,0	1/1:0,7:7:14.84:184,15,0	1/1:0,9:9:27.09:384,27,0	1/1:2,12:14:33.10:453,33,0	1/1:0,5:5:15.05:215,15,0	./.	1/1:0,6:6:18.05:241,18,0	1/1:0,7:7:21.07:300,21,0	1/1:0,13:12:24.55:343,25,0	1/1:2,9:11:18.06:257,18,0	1/1:2,7:9:18.06:257,18,0	1/1:1,5:6:9.03:129,9,0	1/1:0,4:4:9.03:128,9,0	1/1:0,8:8:24.08:343,24,0	1/1:0,8:8:21.07:298,21,0	1/1:0,5:5:9.03:129,9,0
chr10	73453105	.	AACACACAC	A	479.37	PASS	AB=0.750;AC=9;AF=0.180;AN=50;BaseQRankSum=4.800;DP=320;FS=0.000;HRun=0;HaplotypeScore=104.8903;InbreedingCoeff=0.5485;MQ=42.57;MQ0=20;MQRankSum=-4.300;QD=8.12;ReadPosRankSum=0.682;VQSLOD=1.7420;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:11:3.01:0,3,105	0/0:5,0:6:12.04:0,12,382	./.	./.	0/0:10,0:10:6.49:0,6,247	0/0:17,0:18:9.03:0,9,311	0/0:12,0:13:12.04:0,12,308	0/0:16,0:15:12.04:0,12,428	0/0:9,1:11:15.01:0,15,453	0/0:9,0:7:15.82:0,16,393	0/0:12,0:10:3.01:0,3,113	1/1:10,1:13:11.71:123,12,0	0/1:8,2:11:5.15:167,0,5	./.	0/0:12,0:12:9.03:0,9,369	0/0:13,0:17:24.02:0,24,548	0/0:8,0:7:12:0,12,303	0/0:2,0:1:3.01:0,3,98	0/0:8,0:8:9.02:0,9,195	0/0:12,0:12:8.55:0,9,367	0/0:20,0:17:6.02:0,6,188	1/1:9,1:14:14.73:159,15,0	1/1:7,3:10:6.02:150,6,0	1/1:7,1:9:2.90:16,3,0	0/0:4,0:4:0:0,0,0	0/0:9,0:9:21.03:0,21,569	0/0:11,0:11:18.06:0,18,567	0/0:6,0:6:6.02:0,6,184
chr10	73454026	.	G	GA	1601.11	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.982;DP=505;FS=1.853;HRun=8;HaplotypeScore=45.3687;InbreedingCoeff=0.9294;MQ=60.03;MQ0=4;MQRankSum=0.994;QD=27.61;ReadPosRankSum=2.028;VQSLOD=4.1713;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,54:58:99:1696,147,0	0/0:13,0:13:30.01:0,30,275	0/0:20,0:8:21:0,21,191	0/0:17,0:7:9.47:0,9,79	0/0:18,0:18:42:0,42,379	0/0:16,0:16:36.02:0,36,329	0/0:17,0:17:45.02:0,45,412	0/0:29,0:29:46.34:0,46,498	0/0:8,0:8:24:0,24,215	0/0:20,0:19:45.01:0,45,411	0/0:11,0:11:30:0,30,269	0/0:10,0:10:30.02:0,30,275	0/0:13,0:13:36:0,36,325	0/0:7,0:7:18.01:0,18,165	0/0:16,0:16:42.02:0,42,384	0/0:21,0:20:54.01:0,54,489	0/0:38,0:38:99:0,102,933	0/0:21,0:20:51.89:0,52,461	0/0:16,0:16:45.02:0,45,412	0/0:21,0:21:48.01:0,48,438	0/0:21,0:21:60.03:0,60,549	0/0:16,0:16:42.02:0,42,384	0/0:10,0:10:24:0,24,216	0/0:12,0:12:33.02:0,33,302	0/0:16,0:16:35.96:0,36,314	0/0:17,0:17:42.01:0,42,384	0/0:15,0:15:36.02:0,36,329	0/0:7,0:7:21.01:0,21,192
chr10	73454952	.	CTTCA	C	2974.52	PASS	AB=0.967;AC=11;AF=0.212;AN=52;BaseQRankSum=8.901;DP=907;FS=1.002;HRun=0;HaplotypeScore=148.0350;InbreedingCoeff=0.9158;MQ=63.90;MQ0=2;MQRankSum=-0.622;QD=16.34;ReadPosRankSum=1.425;VQSLOD=3.4853;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:46:28.79:0,29,359	0/0:19,0:19:36.12:0,36,786	./.	./.	0/1:28,1:29:1.06:1,0,917	0/0:26,0:26:39.11:0,39,820	0/0:32,0:32:42.14:0,42,926	0/0:41,0:41:9.01:0,9,138	0/0:41,0:41:69.22:0,69,1535	0/0:31,0:54:83.80:0,84,1352	0/0:9,0:23:46.38:0,46,752	1/1:23,16:39:54.18:813,54,0	1/1:13,14:27:33.11:504,33,0	0/0:38,0:38:60.21:0,60,1383	0/0:43,0:43:57.20:0,57,1289	0/0:35,0:35:57.20:0,57,1297	0/0:32,0:32:39.60:0,40,880	0/0:30,0:30:39.13:0,39,880	0/0:31,0:31:33.11:0,33,742	0/0:34,1:35:14:0,14,1227	0/0:33,0:32:51.18:0,51,1177	1/1:20,18:38:45.15:693,45,0	1/1:10,11:22:29.21:435,29,0	1/1:8,18:27:47.19:699,47,0	0/0:24,0:24:30.10:0,30,651	0/0:41,0:43:72.15:0,72,1477	0/0:35,0:35:57.20:0,57,1287	0/0:26,0:26:39.13:0,39,886
chr10	73455791	.	TG	T	2667.70	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.517;DP=526;FS=0.000;HRun=3;HaplotypeScore=50.3092;InbreedingCoeff=0.9975;MQ=89.25;MQ0=0;MQRankSum=-1.061;QD=29.64;ReadPosRankSum=1.193;VQSLOD=2.8409;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:84.26:1041,84,0	0/0:7,0:7:18.06:0,18,259	0/0:24,0:24:66.07:0,66,964	0/0:22,0:21:60.11:0,60,799	0/0:25,0:25:75.17:0,75,1019	0/0:18,0:18:54.16:0,54,742	0/0:22,0:22:63.21:0,63,905	0/0:21,0:21:63.20:0,63,876	0/0:11,0:11:33.11:0,33,475	1/1:1,19:20:57.16:689,57,0	1/1:0,16:16:42.09:503,42,0	0/0:18,0:18:51.15:0,51,699	0/0:17,0:17:48.16:0,48,691	0/0:14,0:14:42.13:0,42,588	0/0:14,0:14:42.14:0,42,604	0/0:17,0:17:48.16:0,48,690	0/0:22,0:22:66.20:0,66,916	0/0:24,0:24:72.13:0,72,937	0/0:14,0:14:42.13:0,42,583	0/0:18,0:18:51.15:0,51,714	0/0:23,0:23:63.19:0,63,887	0/0:20,0:20:57.18:0,57,801	0/0:15,0:15:42.10:0,42,563	0/0:20,0:20:60.20:0,60,864	1/1:0,22:22:48.15:595,48,0	0/0:26,0:26:78.26:0,78,1122	0/0:12,0:12:36.12:0,36,518	0/0:12,0:12:30.10:0,30,432
chr10	73456515	.	TTTGCTTGGTTGGTTGGTTGGTTGG	T	2699.07	PASS	AB=0.900;AC=7;AF=0.125;AN=56;BaseQRankSum=7.366;DP=694;FS=4.474;HRun=0;HaplotypeScore=398.4477;InbreedingCoeff=0.8086;MQ=72.93;MQ0=7;MQRankSum=-5.913;QD=34.17;ReadPosRankSum=0.707;VQSLOD=0.8889;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:18:99:110,0,212	0/0:14,0:14:39.05:0,39,2034	0/0:34,0:23:66.01:0,66,947	0/0:33,0:26:65.84:0,66,970	0/0:27,0:27:72.13:0,72,4275	0/0:13,0:13:39.05:0,39,2558	0/0:35,0:35:99:0,102,4486	0/0:30,0:30:82.62:0,83,1840	0/0:24,0:24:66.14:0,66,4833	1/1:18,3:21:8.96:561,9,0	1/1:11,8:19:21.06:1048,21,0	0/0:19,0:19:54.07:0,54,2935	0/0:24,0:24:70.76:0,71,4973	0/0:30,0:30:84.16:0,84,5671	0/0:17,0:17:51.07:0,51,3438	0/0:16,0:16:48.08:0,48,3319	0/0:40,0:40:99:0,117,8581	0/0:28,0:28:18.05:0,18,1517	0/0:23,0:21:51.11:0,51,2506	0/0:25,0:25:75.12:0,75,4648	0/0:40,0:40:99:0,114,6401	0/0:20,0:20:60.04:0,60,3981	0/0:25,0:25:69.12:0,69,4772	0/0:37,0:37:93.14:0,93,5535	1/1:15,6:21:18.04:1122,18,0	0/0:28,0:28:81.18:0,81,4287	0/0:24,0:24:72.22:0,72,6766	0/0:9,0:9:24.07:0,24,1973
chr10	73456519	.	C	CTTGCTTGG	1185.72	PASS	AB=0.906;AC=5;AF=0.089;AN=56;BaseQRankSum=8.833;DP=687;FS=4.772;HRun=0;HaplotypeScore=180.7150;InbreedingCoeff=0.0774;MQ=69.22;MQ0=8;MQRankSum=-5.289;QD=10.68;ReadPosRankSum=1.192;VQSLOD=2.4526;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:0.74:206,0,1	0/0:15,0:15:41.96:0,42,526	0/0:33,0:22:46.88:0,47,437	0/0:28,0:21:43.08:0,43,419	0/0:25,0:25:65.92:0,66,958	0/0:13,0:13:39.04:0,39,634	0/0:35,0:35:98.80:0,99,1148	0/0:30,0:28:75.41:0,75,649	0/0:23,0:23:63.03:0,63,1048	0/1:20,0:20:55.34:277,0,55	0/1:19,0:19:99:157,0,120	0/0:18,0:18:51.02:0,51,714	0/0:25,0:25:71.93:0,72,1043	0/0:28,0:28:59.04:0,59,1294	0/0:17,0:17:51.04:0,51,770	0/0:17,0:17:47.96:0,48,785	0/0:40,0:40:99:0,120,2010	0/1:4,25:34:83.63:444,0,84	0/0:20,0:18:45.04:0,45,575	0/0:26,0:26:69.02:0,69,1048	0/0:43,0:43:99:0,111,1743	0/0:19,0:19:57.03:0,57,1007	0/0:24,0:24:62.90:0,63,1062	0/0:36,0:36:92.83:0,93,1476	0/1:21,0:21:99:220,0,176	0/0:29,0:29:77.82:0,78,1019	0/0:25,0:25:72.02:0,72,1511	0/0:7,0:7:21.04:0,21,469
chr10	73456967	.	A	ACC	5069.01	PASS	AB=0.923;AC=9;AF=0.161;AN=56;BaseQRankSum=8.970;DP=666;FS=0.850;HRun=1;HaplotypeScore=86.0737;InbreedingCoeff=0.8672;MQ=75.82;MQ0=0;MQRankSum=-2.543;QD=39.29;ReadPosRankSum=1.695;VQSLOD=5.1157;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,52:52:99:2306,123,0	0/0:15,0:15:45.15:0,45,689	0/0:29,0:30:81.03:0,81,984	0/0:18,0:18:45.09:0,45,593	0/0:28,0:28:81.27:0,81,1216	0/0:18,0:18:51.16:0,51,758	0/0:22,0:22:63.21:0,63,963	0/0:29,0:29:81.26:0,81,1198	0/0:23,0:23:69.22:0,69,1034	1/1:1,22:24:72.24:1304,72,0	1/1:0,9:10:27.09:506,27,0	0/0:35,0:35:99:0,102,1538	0/0:21,0:21:63.19:0,63,934	0/0:19,0:19:57.19:0,57,870	0/0:36,0:36:99:0,105,1584	0/0:22,0:22:66.22:0,66,1006	0/0:33,0:33:99:0,99,1506	0/0:14,0:14:39.13:0,39,588	0/0:26,0:26:69.23:0,69,1044	0/0:19,0:19:47.23:0,47,721	0/0:30,0:30:90.28:0,90,1346	0/0:17,0:17:48.15:0,48,714	0/0:22,0:22:66.22:0,66,1009	0/0:21,0:21:63.20:0,63,941	1/1:0,19:19:48.16:909,48,0	0/1:22,2:24:44.51:45,0,893	0/0:27,0:27:78.26:0,78,1194	0/0:11,0:11:33.11:0,33,505
chr10	73459927	.	TTGTAGCACGAAGGCTAC	T	4898.80	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.796;DP=611;FS=6.347;HRun=0;HaplotypeScore=269.7943;InbreedingCoeff=0.9919;MQ=81.85;MQ0=0;MQRankSum=-10.119;QD=69.00;ReadPosRankSum=1.694;VQSLOD=3.5335;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,10394	0/0:6,0:6:18.06:0,18,1050	0/0:18,0:18:48.13:0,48,1857	0/0:17,0:17:48.16:0,48,2094	0/0:36,0:36:99:0,99,6545	0/0:23,0:22:60.18:0,60,4057	0/0:20,0:20:60.21:0,60,3893	0/0:35,0:35:99:0,105,6659	0/0:21,0:21:63.20:0,63,4132	0/0:20,0:20:57.19:0,57,4106	0/0:11,0:11:30.10:0,30,1986	1/1:2,8:10:21.03:903,21,0	1/1:3,12:15:27.05:1171,27,0	0/0:22,0:22:66.23:0,66,4880	0/0:26,0:26:78.27:0,78,5996	0/0:19,0:19:54.19:0,54,4319	0/0:15,0:15:45.15:0,45,3601	0/0:19,0:19:57.20:0,57,4534	0/0:25,0:25:72.25:0,72,4911	0/0:19,0:19:57.20:0,57,4306	0/0:37,0:37:99:0,108,8384	1/1:4,7:11:15.05:703,15,0	1/1:8,10:18:20.99:784,21,0	1/1:1,16:17:27.09:1338,27,0	0/0:27,0:27:81.19:0,81,5350	0/0:34,0:34:99:0,102,7495	0/0:32,0:32:93.26:0,93,6497	0/0:12,0:12:36.12:0,36,2546
chr10	73461090	.	GA	G	2002.79	PASS	AB=0.800;AC=21;AF=0.375;AN=56;BaseQRankSum=12.168;DP=426;FS=0.853;HRun=11;HaplotypeScore=49.0380;InbreedingCoeff=0.8867;MQ=59.87;MQ0=6;MQRankSum=-0.694;QD=11.13;ReadPosRankSum=4.669;VQSLOD=2.6003;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,25:36:92.53:739,93,0	0/0:3,0:3:9.01:0,9,89	0/1:3,1:2:18.60:19,0,26	0/0:5,0:4:5.62:0,6,58	0/0:16,1:17:20.46:0,20,415	0/0:14,0:15:41.94:0,42,429	0/0:17,0:15:36.08:0,36,376	0/0:30,0:30:64.03:0,64,657	0/0:13,0:13:27.07:0,27,287	1/1:3,11:14:32.90:271,33,0	1/1:4,17:18:44.93:367,45,0	1/1:1,0:15:16.30:47,16,0	1/1:1,0:13:20.37:59,20,0	0/0:12,0:12:30.08:0,30,319	0/0:11,0:11:30.08:0,30,319	0/0:13,0:12:27.81:0,28,344	0/0:31,1:31:55.55:0,56,758	1/1:8,19:27:44.61:382,45,0	0/0:17,0:17:45.11:0,45,479	0/0:14,0:14:30.08:0,30,319	0/0:5,0:5:12.03:0,12,128	1/1:1,0:8:12.69:36,13,0	1/1:2,0:16:26.48:76,26,0	1/1:1,0:13:18.33:53,18,0	1/1:3,9:12:20.96:172,21,0	0/0:18,0:18:36.09:0,36,383	0/0:13,0:13:39:0,39,392	0/0:11,0:10:30.08:0,30,319
chr10	73461461	.	CA	C	1792.72	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.363;DP=701;FS=18.846;HRun=1;HaplotypeScore=65.3310;InbreedingCoeff=0.9435;MQ=87.03;MQ0=1;MQRankSum=-4.673;QD=37.35;ReadPosRankSum=1.204;VQSLOD=1.8840;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,48:48:99:1888,135,0	0/0:3,0:3:9.03:0,9,144	0/0:27,0:27:81.25:0,81,1181	0/0:22,0:22:60.18:0,60,877	0/0:21,0:21:63.20:0,63,973	0/0:21,0:21:63.20:0,63,974	0/0:25,0:25:75.24:0,75,1175	0/0:30,0:30:90.29:0,90,1383	0/0:28,0:28:84.27:0,84,1319	0/0:23,0:23:69.22:0,69,1038	0/0:23,0:23:69.24:0,69,1095	0/0:32,0:32:96.33:0,96,1534	0/0:22,0:22:63.21:0,63,1006	0/0:27,0:27:81.24:0,81,1260	0/0:34,0:34:99:0,102,1627	0/0:29,0:29:87.30:0,87,1388	0/0:36,0:36:99:0,105,1674	0/0:34,0:34:99:0,102,1629	0/0:25,0:25:75.23:0,75,1145	0/0:22,0:22:66.21:0,66,1031	0/0:35,0:35:99:0,105,1646	0/0:16,0:16:48.16:0,48,750	0/0:18,0:18:54.18:0,54,848	0/0:22,0:21:60.20:0,60,959	0/0:8,0:8:24.08:0,24,384	0/0:30,0:30:90.29:0,90,1408	0/0:22,0:22:66.21:0,66,1032	0/0:18,0:18:54.18:0,54,855
chr10	73462026	.	C	CGGGG	1676.74	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=9.888;DP=506;FS=0.574;HRun=1;HaplotypeScore=112.5709;InbreedingCoeff=0.8692;MQ=55.11;MQ0=14;MQRankSum=-9.378;QD=25.03;ReadPosRankSum=0.604;VQSLOD=0.4886;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:87.30:0,87,1662	0/0:9,0:9:24.08:0,24,443	0/0:6,0:4:9.03:0,9,147	0/1:5,0:5:26.69:27,0,81	0/0:17,0:16:48.16:0,48,928	0/0:26,0:25:75.24:0,75,1438	0/0:35,0:29:78.26:0,78,1478	0/0:16,0:16:48.16:0,48,902	0/0:23,0:23:60.17:0,60,1126	0/0:17,0:17:51.17:0,51,962	0/0:15,0:14:36.12:0,36,705	1/1:10,1:11:33.09:464,33,0	1/1:14,1:15:36.07:448,36,0	0/0:14,0:13:36.12:0,36,705	0/0:20,0:20:57.20:0,57,1119	0/0:15,0:15:45.14:0,45,849	0/0:31,0:30:75.21:0,75,1428	0/0:18,0:17:45.15:0,45,840	0/0:13,0:13:39.13:0,39,752	0/0:21,0:21:60.19:0,60,1144	0/0:26,0:26:66.21:0,66,1244	1/1:15,1:14:33.04:524,33,0	1/1:9,1:9:18.04:190,18,0	1/1:9,1:9:15.02:201,15,0	0/0:22,0:22:60.21:0,60,1178	0/0:24,0:24:57.19:0,57,1117	0/0:27,0:27:75.17:0,75,1292	0/0:12,0:12:33.11:0,33,621
chr10	73462027	.	GAAAAA	G	2140.37	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.239;DP=511;FS=3.950;HRun=7;HaplotypeScore=116.3914;InbreedingCoeff=0.9739;MQ=56.90;MQ0=12;MQRankSum=-9.346;QD=41.16;ReadPosRankSum=2.220;VQSLOD=1.1698;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:89.30:0,89,2509	0/0:8,0:8:24.07:0,24,673	0/0:7,0:5:8.29:0,8,269	0/0:4,0:5:15.02:0,15,249	0/0:19,0:18:54.09:0,54,1298	0/0:25,0:25:72.23:0,72,2063	0/0:36,0:30:90.18:0,90,2489	0/0:18,0:18:54.05:0,54,1269	0/0:22,0:22:60.20:0,60,1635	0/0:19,0:19:51.06:0,51,1031	0/0:17,0:16:45.13:0,45,966	1/1:2,9:11:30.10:593,30,0	1/1:2,11:13:30.10:614,30,0	0/0:14,0:13:36.09:0,36,776	0/0:21,0:21:63.22:0,63,1836	0/0:15,0:15:42.03:0,42,1025	0/0:30,0:29:75.26:0,75,2270	0/0:20,0:19:51.04:0,51,1492	0/0:14,0:14:38.34:0,38,955	0/0:23,0:23:63.20:0,63,1592	0/0:26,0:26:72.23:0,72,2052	1/1:3,9:11:24.03:451,24,0	1/1:2,7:9:18.06:371,18,0	1/1:2,5:6:15.05:285,15,0	0/0:23,0:23:60.20:0,60,1430	0/0:24,0:24:66.20:0,66,1685	0/0:29,0:29:81.23:0,81,2295	0/0:11,0:12:33.11:0,33,946
chr10	73462035	.	GA	G	924.60	PASS	AB=0.789;AC=16;AF=0.286;AN=56;BaseQRankSum=10.485;DP=527;FS=0.446;HRun=12;HaplotypeScore=81.5696;InbreedingCoeff=0.7161;MQ=59.81;MQ0=10;MQRankSum=-3.312;QD=7.90;ReadPosRankSum=1.951;VQSLOD=2.6927;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:31:45.38:0,45,645	0/0:9,0:9:0.87:0,1,185	0/0:10,0:6:0.38:0,0,80	0/1:6,0:6:15.08:15,0,72	0/0:20,0:19:42.05:0,42,411	0/0:22,1:23:39.87:0,40,578	0/0:33,0:29:75.40:0,75,740	0/0:26,0:26:42.92:0,43,612	0/0:19,0:20:41.99:0,42,399	1/1:0,15:15:41.84:325,42,0	1/1:4,13:16:5.35:218,5,0	1/1:10,0:10:19.73:64,20,0	1/1:16,0:16:20.32:69,20,0	0/0:13,0:12:21.04:0,21,213	0/0:24,0:24:55.33:0,55,570	0/0:13,0:13:18.04:0,18,183	0/0:33,0:32:74.94:0,75,744	0/0:22,0:21:53.94:0,54,514	0/0:18,0:18:40.55:0,41,357	0/0:21,0:23:29.85:0,30,271	0/0:25,1:26:45.86:0,46,623	1/1:11,0:10:12.16:57,12,0	1/1:9,0:9:13.03:41,13,0	1/1:7,0:6:9.49:32,9,0	0/1:7,19:26:9.96:291,0,10	0/0:23,0:26:59.71:0,60,546	0/0:26,1:28:51.41:0,51,647	0/0:12,0:12:14.77:0,15,134
chr10	73462265	.	GT	G	4638.28	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=14.382;DP=635;FS=0.778;HRun=1;HaplotypeScore=96.2481;InbreedingCoeff=0.9087;MQ=85.13;MQ0=0;MQRankSum=-3.475;QD=29.92;ReadPosRankSum=-0.080;VQSLOD=4.4945;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,29:38:99:1416,107,0	0/0:9,0:9:27.09:0,27,412	0/0:29,0:28:74.40:0,74,1110	0/1:26,0:26:9.07:9,0,587	0/0:11,0:11:30.10:0,30,451	0/0:21,0:21:63.21:0,63,963	0/0:26,0:26:75.24:0,75,1126	0/0:23,0:23:66.21:0,66,966	0/0:25,0:25:72.23:0,72,1073	0/0:16,0:16:48.13:0,48,673	0/0:7,0:7:21.07:0,21,320	1/1:1,28:29:75.06:1047,75,0	1/1:1,17:18:54.18:747,54,0	0/0:22,0:22:66.21:0,66,986	0/0:29,0:29:84.28:0,84,1276	0/0:32,0:32:87.29:0,87,1328	0/0:42,0:42:99:0,123,1808	0/0:27,0:27:75.23:0,75,1121	0/0:15,0:15:42.07:0,42,582	0/0:17,0:17:48.12:0,48,678	0/0:45,0:45:99:0,135,2043	1/1:0,11:11:24.08:331,24,0	1/1:0,15:15:29.89:418,30,0	1/1:0,18:18:48.16:671,48,0	0/0:20,0:20:57.14:0,57,790	0/0:30,0:30:90.30:0,90,1350	0/0:22,0:22:66.22:0,66,1009	0/0:12,0:12:36.12:0,36,547
chr10	73462913	.	G	GT	2454.96	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.611;DP=610;FS=0.494;HRun=1;HaplotypeScore=55.0592;InbreedingCoeff=0.9874;MQ=77.45;MQ0=0;MQRankSum=-1.859;QD=38.97;ReadPosRankSum=1.645;VQSLOD=4.1532;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.24:0,81,1030	0/0:7,0:7:21.07:0,21,272	0/0:15,0:15:39.08:0,39,461	0/0:13,0:13:30.04:0,30,343	0/0:34,0:34:90.25:0,90,1135	0/0:23,0:23:69.22:0,69,880	0/0:19,0:19:57.14:0,57,692	0/0:26,0:26:75.22:0,75,927	0/0:18,0:18:54.18:0,54,698	1/1:1,21:22:63.17:884,63,0	1/1:0,27:27:81.10:1132,81,0	0/0:23,0:23:66.10:0,66,803	0/0:23,0:23:69.21:0,69,878	0/0:22,0:23:69.10:0,69,844	0/0:29,0:29:87.24:0,87,1081	0/0:22,0:22:66.21:0,66,843	0/0:15,0:15:45.10:0,45,530	0/0:21,0:21:63.19:0,63,795	0/0:29,0:29:81.23:0,81,1011	0/0:30,0:30:90.26:0,90,1116	0/0:13,0:13:36.10:0,36,449	0/0:24,0:24:69.20:0,69,866	0/0:23,0:23:69.22:0,69,880	0/0:27,0:27:78.17:0,78,936	1/1:0,14:14:39.13:582,39,0	0/0:21,0:21:63.18:0,63,780	0/0:36,0:36:99:0,108,1344	0/0:4,0:4:12.04:0,12,155
chr10	73463525	.	AGACGAAAC	A	1283	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.549;DP=700;FS=0.934;HRun=0;HaplotypeScore=171.6044;InbreedingCoeff=0.9450;MQ=91.50;MQ0=0;MQRankSum=-7.025;QD=42.77;ReadPosRankSum=0.634;VQSLOD=3.4451;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:30:51.11:1378,51,0	0/0:13,0:13:36.12:0,36,1529	0/0:31,0:31:93.32:0,93,3805	0/0:27,0:28:84.29:0,84,3411	0/0:18,0:18:48.15:0,48,1811	0/0:21,0:21:63.22:0,63,2678	0/0:17,0:17:48.16:0,48,2165	0/0:31,0:31:93.11:0,93,3549	0/0:26,0:26:75.26:0,75,3349	0/0:27,0:27:81.27:0,81,3426	0/0:23,0:23:66.23:0,66,2738	0/0:31,0:31:93.32:0,93,4100	0/0:28,0:28:84.29:0,84,3635	0/0:29,0:29:87.28:0,87,3779	0/0:41,0:41:99:0,120,5131	0/0:27,0:27:81.28:0,81,3388	0/0:25,0:25:75.26:0,75,3311	0/0:19,0:19:57.13:0,57,2312	0/0:15,0:15:39.13:0,39,1712	0/0:14,0:14:36.12:0,36,1624	0/0:54,0:54:99:0,157,6582	0/0:29,0:29:87.30:0,87,3799	0/0:19,0:19:57.20:0,57,2499	0/0:32,0:32:96.33:0,96,4271	0/0:21,0:21:63.22:0,63,2831	0/0:33,0:32:96.33:0,96,4072	0/0:15,0:15:45.15:0,45,2009	0/0:3,0:3:9.03:0,9,406
chr10	73464177	.	C	CT	471.45	PASS	AB=0.857;AC=3;AF=0.054;AN=56;BaseQRankSum=-4.498;DP=392;FS=2.807;HRun=10;HaplotypeScore=47.7456;InbreedingCoeff=0.4665;MQ=75.09;MQ0=1;MQRankSum=0.329;QD=18.13;ReadPosRankSum=1.043;VQSLOD=4.2712;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:13:37.99:0,38,301	0/0:6,0:6:14.97:0,15,123	0/0:16,0:13:5.98:0,6,105	0/0:10,0:8:5.68:0,6,33	0/0:21,0:21:22.17:0,22,387	0/0:17,1:18:12.95:0,13,312	0/0:11,0:11:30.41:0,30,244	0/0:16,0:17:32.89:0,33,263	0/0:7,0:7:20.02:0,20,154	0/0:13,0:13:32.70:0,33,258	0/0:19,0:19:53.92:0,54,442	0/0:7,0:7:14.96:0,15,119	0/0:8,0:8:17.97:0,18,148	0/0:15,0:15:41.95:0,42,345	0/0:16,0:16:44.91:0,45,364	0/0:10,0:11:25.52:0,26,201	0/0:11,0:11:29.93:0,30,242	1/1:1,19:20:52.67:561,53,0	0/0:23,0:24:61.46:0,61,483	0/0:26,1:27:41.97:0,42,541	0/0:3,0:3:8.99:0,9,74	0/1:5,1:6:13.97:14,0,105	0/0:21,0:21:56.59:0,57,451	0/0:1,0:1:2.99:0,3,24	0/0:20,0:20:50.89:0,51,411	0/0:22,0:22:56.93:0,57,468	0/0:19,0:20:52.95:0,53,424	0/0:8,0:9:26.01:0,26,203
chr10	73464226	.	GA	G	1273.92	PASS	AB=0.771;AC=19;AF=0.339;AN=56;BaseQRankSum=6.650;DP=457;FS=1.001;HRun=12;HaplotypeScore=56.0391;InbreedingCoeff=0.2014;MQ=79.84;MQ0=8;MQRankSum=-1.108;QD=5.40;ReadPosRankSum=0.602;VQSLOD=1.4349;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,1:21:24.69:0,25,394	0/0:12,0:12:9.80:0,10,267	0/0:38,0:18:18.93:0,19,136	0/1:37,0:16:11.82:12,0,84	0/0:18,1:19:17.03:0,17,328	0/0:13,1:14:18.85:0,19,366	0/0:11,0:11:29.54:0,30,276	0/1:16,2:18:2.30:2,0,312	0/0:8,0:8:21:0,21,197	0/1:4,6:10:12.53:98,0,13	1/1:7,16:25:15.43:282,15,0	0/1:2,10:12:6.68:139,0,7	1/1:3,3:6:8.96:69,9,0	0/0:10,0:10:18:0,18,182	0/0:14,2:17:1.45:0,1,364	0/1:7,1:8:2.35:2,0,145	0/0:18,0:18:51.10:0,51,514	0/1:18,3:21:24.61:25,0,320	0/1:18,4:23:48.04:48,0,263	0/0:18,1:19:18.82:0,19,360	0/0:7,0:8:14.56:0,15,177	0/1:2,7:9:12.53:98,0,13	1/1:4,15:21:39.86:290,40,0	0/1:2,7:9:3.54:159,0,4	1/1:3,11:14:26.87:209,27,0	0/1:12,2:14:10.41:10,0,269	0/0:21,1:24:36.56:0,37,523	0/1:6,2:8:3.65:4,0,137
chr10	73465126	.	A	ATG	399.92	PASS	AB=0.704;AC=21;AF=0.525;AN=40;BaseQRankSum=0.086;DP=556;FS=1.566;HRun=0;HaplotypeScore=81.4348;InbreedingCoeff=0.3830;MQ=65.28;MQ0=12;MQRankSum=-0.224;QD=1.67;ReadPosRankSum=0.190;VQSLOD=1.7463;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:28:2.99:24,3,0	./.	./.	./.	./.	0/0:15,0:15:5.99:0,6,55	0/0:26,0:25:3:0,3,31	./.	1/1:14,1:14:3.01:43,3,0	1/1:13,0:13:2.94:18,3,0	1/1:12,0:12:3:26,3,0	./.	1/1:26,0:25:6:66,6,0	0/0:17,0:16:3:0,3,31	0/0:15,0:15:9.02:0,9,94	0/0:12,0:11:3:0,3,31	./.	1/1:16,0:15:4.71:28,5,0	1/1:26,0:26:0.94:2,1,0	0/0:18,0:18:2.74:0,3,12	0/0:22,0:22:5.08:0,5,31	1/1:21,0:21:3.01:44,3,0	1/1:14,0:14:3.01:43,3,0	0/1:22,9:38:19.35:118,0,19	1/1:30,0:29:12:119,12,0	./.	0/0:23,0:22:8.85:0,9,77	0/0:7,0:7:2.83:0,3,23
chr10	73467160	.	C	CT	8655.78	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-12.270;DP=666;FS=0.991;HRun=2;HaplotypeScore=59.2802;InbreedingCoeff=0.9999;MQ=91.33;MQ0=0;MQRankSum=-2.897;QD=38.30;ReadPosRankSum=4.859;VQSLOD=5.1766;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:57.19:820,57,0	0/0:10,0:10:30.09:0,30,368	0/0:29,0:29:78:0,78,897	0/0:25,0:25:69.18:0,69,830	0/0:35,0:35:99:0,102,1263	0/0:27,0:27:81.22:0,81,966	0/0:20,0:20:54.14:0,54,634	0/0:37,0:37:99:0,105,1251	0/0:25,0:25:72.23:0,72,892	1/1:0,35:35:99:1431,105,0	1/1:0,18:18:54.18:777,54,0	1/1:1,23:24:54.18:778,54,0	1/1:0,19:19:57.19:821,57,0	0/0:22,0:22:66.20:0,66,807	0/0:22,0:22:63.20:0,63,780	0/0:28,0:28:81.23:0,81,978	0/0:16,0:16:45.14:0,45,557	1/1:1,18:19:54.10:748,54,0	0/0:26,0:26:72.21:0,72,871	0/0:26,0:26:75.17:0,75,887	0/0:21,0:21:57.18:0,57,706	1/1:0,18:18:51.17:734,51,0	1/1:1,28:29:77.99:1122,78,0	1/1:1,14:15:39.13:561,39,0	1/1:2,22:24:60.20:864,60,0	0/0:23,0:23:69.18:0,69,830	0/0:34,0:34:99:0,102,1237	0/0:14,0:14:42.13:0,42,520
chr10	73468529	.	CGT	C	135.39	PASS	AB=0.977;AC=16;AF=0.308;AN=52;BaseQRankSum=0.448;DP=623;FS=0.000;HRun=0;HaplotypeScore=91.2808;InbreedingCoeff=0.0661;MQ=62.10;MQ0=12;MQRankSum=0.721;QD=0.54;ReadPosRankSum=0.864;VQSLOD=1.6362;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:36:12:0,12,119	1/1:6,1:7:3.01:32,3,0	./.	0/0:33,0:20:0:0,0,0	0/1:21,0:21:4.76:5,0,111	0/1:21,0:21:5.93:6,0,59	0/1:26,1:26:5.15:5,0,258	./.	0/1:20,1:21:41.90:42,0,158	0/0:15,0:13:15.99:0,16,96	0/0:11,0:11:2.74:0,3,13	0/0:25,0:25:14.76:0,15,139	0/0:29,0:27:20.45:0,20,149	0/0:23,0:22:3.01:0,3,44	0/1:19,1:20:5.11:5,0,267	0/1:15,1:16:17.31:17,0,161	0/0:39,0:40:0.91:0,1,534	1/1:19,0:22:2.84:14,3,0	1/1:23,1:24:2.30:31,2,0	1/1:24,0:23:8.83:58,9,0	0/1:33,0:32:48.53:49,0,128	0/0:13,0:13:5.74:0,6,37	0/0:15,0:15:8.02:0,8,104	0/0:29,0:28:11.98:0,12,99	0/0:24,0:23:2.98:0,3,26	0/0:15,0:15:8.84:0,9,81	0/1:17,0:17:11.08:11,0,182	0/0:6,0:6:8.86:0,9,75
chr10	73469414	.	T	TCTCTCA	2645.75	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=3.359;DP=512;FS=12.872;HRun=0;HaplotypeScore=129.2096;InbreedingCoeff=0.7943;MQ=65.92;MQ0=2;MQRankSum=-5.607;QD=38.34;ReadPosRankSum=0.082;VQSLOD=2.5794;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.25:0,93,1825	0/0:6,0:6:18.06:0,18,371	0/0:30,0:17:4.94:0,5,340	0/0:39,0:27:31.28:0,31,687	0/0:14,0:14:39.08:0,39,726	0/0:10,0:10:27.09:0,27,595	0/0:18,0:18:51.18:0,51,1086	0/0:20,0:20:39.09:0,39,731	0/0:7,0:7:21.07:0,21,415	1/1:17,1:18:42.13:1060,42,0	1/1:11,2:13:33.11:790,33,0	0/0:11,0:11:30.09:0,30,588	0/0:17,0:17:48.16:0,48,1034	0/0:23,0:23:66.21:0,66,1407	0/0:23,0:23:63.21:0,63,1341	0/0:17,0:17:42.13:0,42,878	0/0:30,0:30:84.24:0,84,1685	0/0:26,0:26:63.17:0,63,1294	0/0:20,0:20:51.17:0,51,1026	0/0:10,0:10:27.09:0,27,594	0/0:21,0:21:60.12:0,60,1075	0/0:12,0:12:30.10:0,30,588	0/0:9,0:9:24.08:0,24,510	0/0:19,0:19:48.11:0,48,917	1/1:14,4:18:36.12:916,36,0	0/1:20,0:20:28.68:29,0,1030	0/0:17,0:17:42.12:0,42,841	0/0:7,0:7:15.05:0,15,331
chr10	73469437	.	ATCTC	A	3167.33	PASS	AB=0.950;AC=20;AF=0.357;AN=56;BaseQRankSum=7.438;DP=564;FS=2.989;HRun=0;HaplotypeScore=118.8965;InbreedingCoeff=0.8087;MQ=74.15;MQ0=8;MQRankSum=-0.763;QD=15.08;ReadPosRankSum=2.949;VQSLOD=3.5562;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,1:33:19.31:0,19,282	0/0:6,0:6:18.06:0,18,444	0/1:52,0:18:3.92:4,0,242	0/0:67,0:34:26.51:0,27,401	0/0:19,0:20:47.90:0,48,991	0/0:12,0:12:30.10:0,30,715	0/1:16,1:18:11.09:11,0,758	0/0:21,0:23:44.62:0,45,801	0/0:8,0:8:21.05:0,21,432	1/1:12,7:19:0.58:414,1,0	1/1:13,1:14:15.04:185,15,0	1/1:3,5:8:12.04:200,12,0	1/1:2,12:15:33.11:549,33,0	0/0:23,0:25:56.93:0,57,1332	0/0:19,0:20:53.92:0,54,1260	0/0:15,0:15:36.12:0,36,860	0/0:29,0:29:57.20:0,57,1380	1/1:7,22:29:48.08:787,48,0	0/0:24,0:23:44.89:0,45,964	0/0:11,0:11:27.09:0,27,636	0/0:15,0:17:38.87:0,39,868	1/1:2,7:11:8.36:265,8,0	1/1:1,8:9:21.07:350,21,0	1/1:7,10:17:24.06:400,24,0	1/1:15,2:17:17.91:206,18,0	0/0:21,0:23:55.06:0,55,1127	0/0:13,0:13:36.12:0,36,887	0/0:6,0:7:20.62:0,21,336
chr10	73469441	.	C	CAA	1307.35	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=8.067;DP=566;FS=5.155;HRun=0;HaplotypeScore=108.1979;InbreedingCoeff=0.6761;MQ=74.58;MQ0=8;MQRankSum=-3.812;QD=20.11;ReadPosRankSum=-2.945;VQSLOD=3.1152;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:80.16:0,80,651	0/0:7,0:7:21.07:0,21,336	0/0:54,0:19:22.48:0,22,281	0/0:69,0:35:61.75:0,62,701	0/0:20,0:20:57.17:0,57,889	0/0:13,0:13:39.12:0,39,602	0/0:19,0:19:54.03:0,54,800	0/0:24,0:24:71.91:0,72,1040	0/0:8,0:8:21.07:0,21,335	1/1:9,7:17:17.03:588,17,0	1/1:4,8:12:26.35:329,26,0	0/0:8,0:8:14.13:0,14,99	0/0:16,0:16:37.65:0,38,254	0/0:25,0:25:69.20:0,69,1064	0/0:23,0:23:66.16:0,66,969	0/0:16,0:16:42.13:0,42,656	0/0:26,0:26:66.21:0,66,1044	0/0:29,0:29:8.53:0,9,403	0/0:23,0:21:63.19:0,63,982	0/0:12,0:12:33.11:0,33,527	0/0:17,0:17:48.14:0,48,737	0/1:11,0:11:26.08:26,0,123	0/1:9,0:9:26.30:26,0,110	0/0:16,0:16:34.60:0,35,279	1/1:6,10:16:38.87:490,39,0	0/0:23,1:24:11.47:0,11,973	0/0:13,0:13:39.13:0,39,624	0/0:7,0:7:21.03:0,21,287
chr10	73469575	.	G	GAA	797.86	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=6.713;DP=433;FS=0.000;HRun=13;HaplotypeScore=80.0534;InbreedingCoeff=0.5728;MQ=61.81;MQ0=12;MQRankSum=-6.131;QD=7.53;ReadPosRankSum=-2.093;VQSLOD=0.4256;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:9.62:0,10,229	0/0:5,0:6:8.72:0,9,64	0/1:27,0:7:1.57:2,0,7	0/0:28,0:9:1.87:0,2,5	0/0:10,0:12:14.30:0,14,146	0/0:19,0:20:29.46:0,29,248	0/0:15,0:15:16.18:0,16,201	0/0:31,0:31:63.80:0,64,514	0/0:6,0:7:3.36:0,3,71	1/1:8,3:11:18.05:220,18,0	1/1:10,7:19:5.13:339,5,0	0/0:8,0:8:16.80:0,17,135	0/0:11,0:11:14.84:0,15,122	0/0:18,0:18:29.63:0,30,258	0/0:8,0:7:11.19:0,11,86	0/0:6,0:9:11.67:0,12,87	0/0:29,0:36:46.61:0,47,510	1/1:11,0:16:12.91:73,13,0	0/0:13,0:10:8.96:0,9,79	0/1:14,0:15:5.85:6,0,62	0/1:4,0:4:7.31:7,0,67	0/0:16,0:17:13.46:0,13,116	0/0:10,0:11:17.52:0,18,143	0/0:18,0:18:41.76:0,42,348	1/1:7,6:13:30.12:304,30,0	0/0:12,0:12:8.85:0,9,75	0/0:8,0:8:14.44:0,14,115	0/0:7,0:6:8.54:0,9,54
chr10	73469589	.	G	GA	377.97	PASS	AB=0.977;AC=7;AF=0.125;AN=56;BaseQRankSum=2.702;DP=444;FS=0.665;HRun=13;HaplotypeScore=70.9007;InbreedingCoeff=0.1901;MQ=71.41;MQ0=11;MQRankSum=-2.381;QD=3.57;ReadPosRankSum=-1.402;VQSLOD=0.1825;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,12:25:26.11:426,26,0	0/0:4,0:4:11.95:0,12,94	0/0:44,0:11:4.57:0,5,91	0/1:39,0:18:45.48:45,0,63	0/1:9,1:10:1.78:2,0,186	0/0:17,0:17:38.92:0,39,320	0/0:13,0:13:32.95:0,33,269	0/0:30,0:30:70.75:0,71,570	0/1:8,0:8:1.38:1,0,142	0/0:12,0:12:29.78:0,30,226	0/0:21,0:21:11.80:0,12,197	0/0:10,0:10:16.50:0,16,125	0/0:8,0:8:17.97:0,18,145	0/0:15,0:15:26.76:0,27,210	0/0:7,0:6:11.98:0,12,98	0/0:10,0:10:17.97:0,18,147	0/0:34,0:34:56.52:0,57,506	0/0:18,0:17:10.62:0,11,264	0/0:12,0:10:23.97:0,24,197	0/1:12,0:12:12.67:13,0,98	0/0:6,0:6:14.98:0,15,123	0/0:9,0:9:20.96:0,21,171	0/0:15,0:15:29.71:0,30,244	0/0:20,0:20:44.87:0,45,362	0/0:16,0:16:9.94:0,10,212	0/0:11,0:11:29.95:0,30,246	0/1:9,0:9:11.47:11,0,106	0/0:6,0:4:8.98:0,9,73
chr10	73469606	.	GT	G	1345.95	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=3.445;DP=425;FS=0.000;HRun=9;HaplotypeScore=68.3839;InbreedingCoeff=0.8320;MQ=78.37;MQ0=8;MQRankSum=3.184;QD=11.41;ReadPosRankSum=2.918;VQSLOD=2.7387;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:45.09:0,45,504	0/0:4,0:4:12.02:0,12,129	0/1:43,0:14:29.83:30,0,65	0/0:42,0:20:5.81:0,6,162	0/0:13,0:14:29.92:0,30,324	0/0:15,0:15:33.09:0,33,372	0/0:14,0:15:38.93:0,39,419	0/0:25,0:25:54.13:0,54,597	0/0:12,0:12:36.05:0,36,391	0/0:12,0:13:29.92:0,30,325	0/0:19,1:20:48.10:0,48,539	1/1:2,6:8:17.98:165,18,0	1/1:5,3:8:14.72:131,15,0	0/0:10,0:10:24.05:0,24,260	0/0:5,0:5:15.03:0,15,164	0/0:10,0:10:24.06:0,24,269	0/0:24,0:24:50.18:0,50,559	1/1:3,16:19:48.01:439,48,0	0/0:14,0:15:32.92:0,33,353	0/0:9,0:9:23.43:0,23,250	0/0:7,0:7:18.05:0,18,207	1/1:1,8:9:18:165,18,0	1/1:0,14:14:36.02:330,36,0	1/1:5,12:17:30:274,30,0	0/0:14,0:14:36.06:0,36,400	0/0:17,0:17:45.12:0,45,510	0/0:8,0:8:24.07:0,24,277	0/0:4,0:3:3.01:0,3,34
chr10	73469622	.	CTACG	C	1983.35	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.038;DP=387;FS=2.109;HRun=0;HaplotypeScore=82.5471;InbreedingCoeff=0.8696;MQ=79.79;MQ0=0;MQRankSum=-4.948;QD=46.12;ReadPosRankSum=1.712;VQSLOD=4.3403;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:57.20:0,57,1518	0/0:5,0:5:15.05:0,15,399	0/0:20,0:13:30.19:0,30,852	0/0:17,0:12:9.93:0,10,241	0/0:13,0:13:39.13:0,39,1021	0/0:15,0:15:42.14:0,42,1103	0/0:15,0:15:39.13:0,39,1040	0/0:23,0:23:57.20:0,57,1477	0/0:11,0:11:33.11:0,33,867	1/1:1,11:12:33.11:615,33,0	1/1:2,15:17:45.15:838,45,0	0/0:7,0:7:21.07:0,21,558	0/0:8,0:8:18.06:0,18,479	0/0:14,0:14:42.14:0,42,1117	0/0:6,0:6:18.06:0,18,479	0/0:10,0:10:27.09:0,27,707	0/0:15,0:15:33.11:0,33,879	0/0:26,0:26:72.25:0,72,1917	0/0:13,0:13:39.13:0,39,1032	0/0:14,0:14:36.12:0,36,959	0/0:10,0:10:30.10:0,30,763	0/0:11,0:11:27.09:0,27,691	0/0:14,0:14:39.13:0,39,1039	0/0:14,0:14:30.10:0,30,799	1/1:2,12:14:36.12:672,36,0	0/0:22,1:23:4.27:0,4,1455	0/0:11,0:11:33.11:0,33,810	0/0:1,0:1:3.01:0,3,80
chr10	73469699	.	CT	C	1956.36	PASS	AB=0.804;AC=14;AF=0.250;AN=56;BaseQRankSum=7.996;DP=445;FS=5.764;HRun=11;HaplotypeScore=68.8036;InbreedingCoeff=0.7881;MQ=73.76;MQ0=3;MQRankSum=-0.466;QD=14.82;ReadPosRankSum=3.553;VQSLOD=4.3105;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,32:37:75.92:744,76,0	0/0:4,0:4:9.02:0,9,96	0/0:34,0:18:22.50:0,22,209	0/0:28,0:18:10.68:0,11,171	0/0:15,0:16:41.87:0,42,416	0/0:17,0:17:38.80:0,39,380	0/0:15,0:15:39.09:0,39,409	0/0:21,0:21:51.13:0,51,544	0/0:5,0:5:9.02:0,9,96	0/0:14,0:14:36.05:0,36,367	0/0:10,0:10:18.05:0,18,192	0/1:5,4:9:8.10:143,0,8	1/1:3,11:14:7.88:156,8,0	0/0:21,0:22:50.01:0,50,527	0/0:12,0:12:29.90:0,30,296	0/0:9,1:10:21.05:0,21,224	0/0:14,0:14:39.10:0,39,415	1/1:11,20:31:68.88:566,69,0	0/0:17,1:19:20.30:0,20,405	0/0:14,0:14:27.07:0,27,285	0/0:17,0:18:50.96:0,51,523	1/1:2,5:8:16.80:128,17,0	1/1:3,2:5:8.99:74,9,0	1/1:3,14:17:25.29:325,25,0	0/0:16,0:16:39.10:0,39,413	0/0:22,0:22:44.93:0,45,453	0/1:10,1:11:0.58:1,0,200	0/0:2,0:2:6.02:0,6,64
chr10	73470820	.	G	GA	3887.39	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-11.243;DP=708;FS=0.379;HRun=7;HaplotypeScore=70.9918;InbreedingCoeff=0.9963;MQ=78.72;MQ0=0;MQRankSum=-1.130;QD=29.67;ReadPosRankSum=1.356;VQSLOD=4.0678;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1152	0/0:11,0:11:33.04:0,33,313	0/0:12,0:13:20.02:0,20,169	0/0:22,0:23:26.26:0,26,213	0/0:30,0:30:78.12:0,78,753	0/0:20,0:19:51.08:0,51,492	0/0:25,0:25:72.12:0,72,695	0/0:30,0:30:75.08:0,75,712	0/0:13,0:13:33.05:0,33,319	0/0:39,0:39:96.13:0,96,919	0/0:24,0:24:63.10:0,63,608	1/1:5,25:30:75.23:906,75,0	1/1:8,19:27:34.21:692,34,0	0/0:27,0:27:78.09:0,78,741	0/0:30,0:30:84.13:0,84,811	0/0:23,0:23:69.11:0,69,666	0/0:26,1:27:41.87:0,42,682	0/0:23,0:23:60.06:0,60,572	0/0:32,0:32:93.15:0,93,898	0/0:22,0:22:54.08:0,54,521	0/0:33,0:33:93.13:0,93,891	1/1:2,22:24:28.20:623,28,0	1/1:0,19:19:57.17:688,57,0	1/1:1,30:31:81.25:979,81,0	0/0:19,0:19:51.08:0,51,493	0/0:32,0:32:90.12:0,90,860	0/0:31,0:31:87.12:0,87,834	0/0:8,0:8:18:0,18,166
chr10	73471109	.	T	TTTTTG	3434.36	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-1.548;DP=585;FS=2.322;HRun=0;HaplotypeScore=125.3484;InbreedingCoeff=0.3687;MQ=68.05;MQ0=5;MQRankSum=-0.547;QD=19.29;ReadPosRankSum=-0.581;VQSLOD=3.4639;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:4.61:0,5,197	0/0:11,0:11:21.04:0,21,324	0/0:29,0:19:10.26:0,10,147	0/1:19,0:13:13.34:13,0,84	0/0:19,0:19:42.12:0,42,712	0/0:27,0:27:57.18:0,57,988	0/0:23,0:22:51.08:0,51,850	0/0:26,0:26:27.08:0,27,433	0/0:23,0:23:54.12:0,54,830	1/1:4,17:21:54.14:1283,54,0	1/1:7,16:24:39.04:1010,39,0	0/1:14,0:14:40.76:41,0,44	0/1:22,0:22:5.36:48,0,5	0/0:11,0:11:24.07:0,24,411	0/0:18,0:18:42.14:0,42,742	0/0:19,0:19:42.13:0,42,714	0/0:18,0:18:24.08:0,24,440	0/1:22,0:20:3.45:80,0,3	0/0:29,0:27:30.10:0,30,518	0/0:21,0:21:45.14:0,45,795	0/0:18,0:18:27.09:0,27,495	0/1:13,0:12:20.79:21,0,35	0/1:10,0:10:8.36:70,0,8	0/1:11,0:10:14.06:37,0,14	1/1:7,13:22:25.85:831,26,0	0/0:26,0:26:57.17:0,57,955	0/0:39,0:39:99:0,99,1724	0/0:11,0:11:15.05:0,15,267
chr10	73471124	.	G	GTTT	2703.92	PASS	AB=0.944;AC=16;AF=0.286;AN=56;BaseQRankSum=12.814;DP=576;FS=0.897;HRun=4;HaplotypeScore=100.4936;InbreedingCoeff=0.6351;MQ=67.68;MQ0=7;MQRankSum=-1.364;QD=14.16;ReadPosRankSum=2.899;VQSLOD=-0.1280;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:35:58.79:596,59,0	0/0:11,0:11:30.10:0,30,452	0/0:29,0:19:35.37:0,35,383	0/0:24,0:17:29.39:0,29,308	0/0:20,0:20:54.17:0,54,804	0/0:23,0:23:69.21:0,69,1018	0/0:29,0:28:78.23:0,78,1140	0/0:22,0:22:51.13:0,51,714	0/0:24,0:24:69.21:0,69,1008	0/1:23,0:23:99:322,0,236	0/1:22,0:22:99:279,0,188	0/1:10,3:14:15.95:288,0,16	1/1:5,14:21:17.98:273,18,0	0/0:11,0:11:29.78:0,30,378	0/0:23,0:23:60.18:0,60,883	0/0:20,0:20:57.17:0,57,843	0/0:18,0:17:48.14:0,48,706	1/1:7,16:22:14.23:311,14,0	0/0:24,0:21:47.85:0,48,690	0/0:24,0:24:63.19:0,63,937	0/0:16,0:16:36.10:0,36,522	1/1:5,4:9:14.95:161,15,0	1/1:1,7:10:15.45:187,15,0	1/1:5,6:10:12.51:235,13,0	0/1:22,0:22:99:244,0,135	0/0:25,0:25:66.21:0,66,989	0/0:35,0:35:99:0,102,1526	0/0:7,0:7:21.07:0,21,320
chr10	73471127	.	TTG	T	541.88	PASS	AB=0.967;AC=11;AF=0.196;AN=56;BaseQRankSum=8.183;DP=561;FS=0.000;HRun=0;HaplotypeScore=93.5104;InbreedingCoeff=0.6945;MQ=68.05;MQ0=7;MQRankSum=-2.894;QD=4.55;ReadPosRankSum=-2.383;VQSLOD=1.6270;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,2:35:31.86:275,32,0	0/0:10,0:10:30.06:0,30,405	0/0:26,0:18:37.17:0,37,424	0/0:23,0:16:27.52:0,28,288	0/0:21,0:21:63.18:0,63,935	0/0:23,0:23:68.99:0,69,1049	0/0:29,0:28:80.97:0,81,1169	0/0:20,0:20:60.14:0,60,833	0/0:24,0:24:71.90:0,72,975	0/0:24,0:24:72.17:0,72,791	0/0:21,0:21:57.05:0,57,616	0/1:13,0:13:47.44:76,0,47	0/1:19,0:19:3.12:40,0,3	0/0:11,0:11:33.05:0,33,454	0/0:21,0:21:60.18:0,60,907	0/0:22,0:22:66.17:0,66,959	0/0:19,0:18:51.10:0,51,733	1/1:21,1:21:21.14:115,21,0	0/0:23,0:20:53.83:0,54,728	0/0:22,0:22:66.19:0,66,998	0/0:16,0:16:45.09:0,45,615	0/1:8,1:8:4.41:80,0,4	1/1:10,0:10:5.07:47,5,0	1/1:11,0:10:10.22:72,10,0	0/0:20,0:20:45.10:0,45,486	0/0:25,0:25:66.19:0,66,1034	0/0:35,0:35:99:0,105,1643	0/0:7,0:7:21.07:0,21,316
chr10	73471128	.	TG	T	1132.56	PASS	AB=0.857;AC=13;AF=0.232;AN=56;BaseQRankSum=9.454;DP=554;FS=1.524;HRun=1;HaplotypeScore=79.0686;InbreedingCoeff=0.9063;MQ=68.15;MQ0=7;MQRankSum=-4.133;QD=9.76;ReadPosRankSum=-2.081;VQSLOD=0.5616;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,1:33:83.61:521,84,0	0/0:10,0:10:30.05:0,30,345	0/0:26,0:18:28.47:0,28,353	0/0:21,0:14:27.60:0,28,283	0/0:21,0:21:63.15:0,63,764	0/0:24,0:24:71.97:0,72,871	0/0:28,0:27:76.63:0,77,973	0/0:20,0:20:60.14:0,60,717	0/0:25,0:25:67.33:0,67,767	0/0:24,0:24:71.65:0,72,625	0/0:21,0:21:56.40:0,56,435	0/1:10,2:12:7.54:164,0,8	1/1:17,2:19:17.50:113,17,0	0/0:11,0:11:32.64:0,33,363	0/0:21,0:21:60.18:0,60,759	0/0:22,0:22:66.15:0,66,782	0/0:19,0:18:51.10:0,51,612	1/1:21,2:22:30.63:199,31,0	0/0:22,0:19:57.13:0,57,666	0/0:22,0:22:65:0,65,801	0/0:16,0:16:44.99:0,45,483	1/1:8,1:8:15.95:101,16,0	1/1:9,0:9:17.76:107,18,0	1/1:10,1:10:17.52:116,18,0	0/0:20,0:20:44.70:0,45,377	0/0:23,0:23:66.18:0,66,813	0/0:35,0:35:99:0,105,1304	0/0:7,0:7:21.07:0,21,269
chr10	73471292	.	G	GT	5375.40	PASS	AB=0.875;AC=21;AF=0.375;AN=56;BaseQRankSum=-7.089;DP=489;FS=2.678;HRun=6;HaplotypeScore=52.4627;InbreedingCoeff=0.8958;MQ=72.49;MQ0=0;MQRankSum=-0.922;QD=28.14;ReadPosRankSum=1.357;VQSLOD=5.3877;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:81.11:963,81,0	0/0:7,0:7:18.04:0,18,184	0/0:7,0:7:12.02:0,12,119	0/0:11,0:11:9.96:0,10,98	0/0:24,0:24:63.13:0,63,641	0/0:26,0:26:78.18:0,78,795	0/0:25,0:25:75.16:0,75,760	0/0:23,0:23:63.11:0,63,625	0/0:11,0:11:30.05:0,30,300	1/1:4,17:22:54.13:645,54,0	1/1:1,15:16:48.15:602,48,0	1/1:2,10:12:30.02:377,30,0	1/1:1,16:17:42.13:528,42,0	0/0:13,0:13:36.07:0,36,362	0/0:22,0:22:60.14:0,60,612	0/0:22,0:22:66.14:0,66,666	0/0:13,0:13:30.06:0,30,306	1/1:3,20:23:60.17:739,60,0	0/0:19,0:19:51.11:0,51,520	0/0:23,0:23:66.12:0,66,660	0/0:20,0:19:45.10:0,45,459	1/1:1,8:9:24.08:302,24,0	1/1:0,12:12:30.07:378,30,0	1/1:2,12:14:33.11:415,33,0	1/1:1,11:12:30.10:377,30,0	0/1:18,3:21:50.09:50,0,488	0/0:30,0:28:87.15:0,87,870	0/0:2,0:2:6.01:0,6,61
chr10	73471364	.	AAAAAAAAAAAAAAAAG	A	728.37	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=3.842;DP=441;FS=2.203;HRun=0;HaplotypeScore=174.4602;InbreedingCoeff=0.6898;MQ=62.94;MQ0=22;MQRankSum=-3.763;QD=30.35;ReadPosRankSum=2.807;VQSLOD=2.9480;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,6:22:38.08:823,38,0	0/0:6,0:6:12.93:0,13,836	0/0:42,0:13:24.17:0,24,213	0/0:40,0:10:8.95:0,9,59	0/0:24,0:23:54.15:0,54,1935	0/0:18,0:17:45.13:0,45,1848	0/0:11,0:11:27.08:0,27,1309	0/0:27,0:26:71.74:0,72,2356	0/0:16,0:16:45.15:0,45,2420	0/0:14,0:14:9.73:0,10,327	0/0:17,0:16:44.78:0,45,638	0/0:9,0:9:24.06:0,24,379	0/0:10,0:10:21.04:0,21,311	0/0:9,0:9:24.08:0,24,1043	0/0:15,0:14:39.05:0,39,1691	0/0:27,0:27:66.21:0,66,3672	0/0:13,0:11:30.57:0,31,1596	0/0:16,0:13:6.63:0,7,341	0/0:10,0:10:30.06:0,30,1105	0/0:21,0:21:60.19:0,60,2902	./.	0/0:6,0:6:11.98:0,12,109	0/0:8,0:7:17.89:0,18,174	0/0:4,0:4:5.14:0,5,37	0/0:5,0:5:14.79:0,15,128	0/0:19,0:19:51.14:0,51,1810	0/0:23,0:20:57.16:0,57,2502	0/0:6,0:5:15.05:0,15,703
chr10	73471370	.	AAAAAAAAAAG	A	2229.56	PASS	AB=0.972;AC=17;AF=0.304;AN=56;BaseQRankSum=1.326;DP=504;FS=27.029;HRun=0;HaplotypeScore=135.4238;InbreedingCoeff=0.6669;MQ=56.32;MQ0=25;MQRankSum=0.101;QD=14.20;ReadPosRankSum=-4.449;VQSLOD=-0.3711;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:19:25.90:362,26,0	0/0:6,0:6:12.93:0,13,496	0/0:45,0:11:8.72:0,9,108	0/0:48,0:13:15.93:0,16,130	0/0:23,0:22:54.31:0,54,911	0/0:17,0:16:44.96:0,45,936	0/0:10,0:10:27.03:0,27,707	0/0:30,0:29:66.57:0,67,1077	0/0:17,0:17:48.08:0,48,1376	1/1:20,0:20:41.78:451,42,0	0/1:20,2:21:29.26:322,0,29	1/1:14,0:14:20.86:192,21,0	1/1:14,0:14:0.68:172,1,0	0/0:11,0:11:29.92:0,30,558	0/0:16,0:15:33.07:0,33,910	0/0:24,0:24:67.62:0,68,2056	0/0:16,0:14:39.48:0,39,931	0/1:22,0:19:19.58:217,0,20	0/0:12,0:12:27.39:0,27,518	0/0:23,0:23:54.37:0,54,1590	0/0:2,0:1:2.98:0,3,22	1/1:8,0:8:11.56:85,12,0	0/1:14,0:13:6.03:169,0,6	1/1:6,0:6:10.99:86,11,0	1/1:14,2:16:31.70:365,32,0	0/0:19,0:19:53.81:0,54,945	0/0:22,0:19:60.01:0,60,1314	0/0:6,0:5:14.24:0,14,386
chr10	73471377	.	AAAG	A	2578.10	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=2.305;DP=499;FS=11.286;HRun=0;HaplotypeScore=75.1849;InbreedingCoeff=0.5684;MQ=54.81;MQ0=25;MQRankSum=-3.013;QD=9.24;ReadPosRankSum=-6.130;VQSLOD=-0.5371;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:20:25.17:252,25,0	0/0:6,0:6:12.40:0,12,153	0/1:37,0:9:5.90:6,0,52	0/0:46,0:11:9.89:0,10,114	0/1:23,0:22:43.46:43,0,187	0/0:16,0:15:13.36:0,13,255	0/0:11,0:11:4.12:0,4,189	0/1:34,0:33:35.02:35,0,340	0/0:17,0:17:31.01:0,31,455	1/1:17,0:17:50.94:445,51,0	1/1:24,1:24:49.63:403,50,0	1/1:15,0:15:31.17:329,31,0	1/1:15,1:16:35.88:290,36,0	0/1:11,0:11:20.23:20,0,164	0/0:14,0:13:7.51:0,8,260	0/0:24,0:24:55.34:0,55,675	0/0:17,0:15:35.84:0,36,310	1/1:23,0:20:12.80:250,13,0	0/1:14,0:14:13.45:13,0,188	0/0:24,0:24:20.57:0,21,492	0/0:3,0:2:5.98:0,6,46	1/1:5,0:5:8.98:81,9,0	1/1:11,2:12:21.87:169,22,0	1/1:6,0:6:10.62:78,11,0	1/1:18,0:18:40.71:369,41,0	0/0:16,0:16:14.68:0,15,222	0/0:22,0:20:16.96:0,17,300	0/0:4,0:4:8.96:0,9,102
chr10	73471378	.	AAG	A	2756.44	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=3.803;DP=493;FS=26.401;HRun=0;HaplotypeScore=66.1991;InbreedingCoeff=0.2807;MQ=54.97;MQ0=24;MQRankSum=-3.941;QD=8.64;ReadPosRankSum=-5.680;VQSLOD=0.3087;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:20:37.14:246,37,0	0/0:6,0:6:11.83:0,12,112	0/0:37,0:9:4.88:0,5,55	0/0:44,0:11:9.03:0,9,113	0/1:23,0:22:91.13:91,0,160	0/1:15,0:14:9.64:10,0,192	0/1:11,0:11:22.45:22,0,141	0/1:34,0:33:56.35:56,0,286	0/1:17,0:17:3.34:3,0,299	1/1:15,2:17:50.90:437,51,0	1/1:24,1:24:49.96:395,50,0	1/1:17,0:17:39.82:369,40,0	1/1:16,0:16:35.46:269,35,0	0/1:10,0:10:36.43:36,0,130	0/1:13,0:12:16.96:17,0,188	0/0:24,0:24:30.51:0,31,520	0/0:17,0:15:19.18:0,19,229	0/1:22,0:19:1.25:214,0,1	0/1:14,0:14:31.51:32,0,166	0/0:23,0:23:16.40:0,16,373	0/0:4,0:3:8.97:0,9,70	1/1:5,0:5:8.96:69,9,0	1/1:14,0:13:26.76:190,27,0	1/1:4,1:5:10.80:78,11,0	1/1:17,0:17:48.92:381,49,0	0/0:14,0:14:13.65:0,14,191	0/1:22,0:20:32.15:32,0,193	0/0:4,0:4:7.99:0,8,64
chr10	73472995	.	AAAACCAAACC	A	2075.39	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=6.905;DP=572;FS=2.638;HRun=0;HaplotypeScore=166.5056;InbreedingCoeff=0.8882;MQ=67.90;MQ0=11;MQRankSum=-5.926;QD=15.04;ReadPosRankSum=-0.329;VQSLOD=2.5733;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:57.12:0,57,1951	0/0:8,0:8:9.03:0,9,447	1/1:33,0:23:3.06:8,3,0	0/1:35,0:23:0.02:0,0,1	0/0:19,0:19:21.07:0,21,908	0/0:22,0:22:45.15:0,45,2087	0/0:14,0:14:24.08:0,24,1085	0/0:22,0:22:21.05:0,21,567	0/0:16,0:16:27.08:0,27,1095	0/0:19,0:28:36.12:0,36,1434	0/0:6,0:10:24.07:0,24,758	1/1:2,9:11:21.07:610,21,0	1/1:11,8:19:21.07:622,21,0	0/0:21,0:21:33.08:0,33,1104	0/0:24,0:24:30.10:0,30,1323	0/0:21,0:22:42.14:0,42,1840	0/0:42,0:42:72.25:0,72,3452	0/0:14,0:14:18.06:0,18,877	0/0:26,0:24:30.15:0,30,1226	0/0:18,0:18:30.10:0,30,1326	0/0:22,0:22:48.16:0,48,1979	1/1:5,7:12:18.06:483,18,0	1/1:12,3:14:9.03:267,9,0	1/1:7,6:13:9.03:254,9,0	0/0:11,0:17:27.08:0,27,958	0/0:18,0:18:18.95:0,19,825	0/0:28,0:28:48.16:0,48,2303	0/0:9,0:9:24.08:0,24,1045
chr10	73473207	.	GGTGTGT	G	6497.17	PASS	AB=0.588;AC=19;AF=0.339;AN=56;BaseQRankSum=13.448;DP=609;FS=1.357;HRun=0;HaplotypeScore=136.6039;InbreedingCoeff=0.9027;MQ=59.09;MQ0=5;MQRankSum=-12.440;QD=32.32;ReadPosRankSum=1.911;VQSLOD=4.9014;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:26:9.60:313,10,0	0/0:12,0:12:24.08:0,24,799	0/0:22,1:14:17.93:0,18,366	0/0:22,0:16:35.79:0,36,951	0/0:31,0:32:78.27:0,78,2447	0/0:17,0:17:36.12:0,36,1138	0/0:25,0:25:60.21:0,60,1957	0/0:29,0:29:57.20:0,57,1796	0/0:17,0:17:36.12:0,36,1128	1/1:6,25:31:75.26:1591,75,0	1/1:9,19:28:51.17:1086,51,0	1/1:4,4:8:15.05:312,15,0	1/1:5,11:16:30.10:639,30,0	0/0:17,0:17:42.12:0,42,1257	0/0:17,0:17:39.13:0,39,1240	0/0:20,0:20:54.19:0,54,1741	0/0:36,0:40:93.32:0,93,2823	0/1:6,1:20:2.45:67,0,2	0/0:19,0:19:39.13:0,39,1171	0/0:26,0:28:60.21:0,60,1815	0/0:21,0:24:63.21:0,63,1847	1/1:3,12:15:33.11:702,33,0	1/1:5,17:22:39.13:830,39,0	1/1:9,9:18:18.04:383,18,0	1/1:6,11:17:27.09:575,27,0	0/0:24,1:26:1.68:0,2,1940	0/0:29,0:29:60.19:0,60,1888	0/0:8,0:7:15.05:0,15,500
chr10	73478004	.	A	AT	251.94	PASS	AC=8;AF=0.160;AN=50;BaseQRankSum=0.917;DP=119;FS=12.637;HRun=0;HaplotypeScore=20.0935;InbreedingCoeff=0.4563;MQ=95.00;MQ0=1;MQRankSum=-0.447;QD=12.00;ReadPosRankSum=1.738;VQSLOD=2.6553;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:10:8.72:50,9,0	0/0:4,0:4:3.01:0,3,41	0/0:13,0:8:1.88:0,2,109	0/0:15,0:11:20.85:0,21,214	0/0:4,0:5:9.03:0,9,124	0/0:1,0:1:3.01:0,3,41	0/0:1,0:1:3:0,3,29	0/0:6,0:6:15.05:0,15,208	0/0:1,0:1:3.01:0,3,41	1/1:1,6:7:18.03:246,18,0	1/1:1,0:1:3.01:46,3,0	0/0:2,0:2:6.02:0,6,83	0/0:3,0:3:3.01:0,3,38	0/0:5,0:5:12.03:0,12,149	0/0:6,0:6:15.05:0,15,199	0/0:3,0:3:6.02:0,6,73	0/0:1,0:1:3.01:0,3,39	./.	0/0:4,0:4:12.01:0,12,132	0/0:3,0:3:9.02:0,9,108	0/0:5,0:5:15.05:0,15,206	./.	0/0:3,0:3:9.03:0,9,124	0/0:9,0:9:18.06:0,18,245	1/1:0,3:3:3.01:36,3,0	0/0:2,0:2:3.01:0,3,42	0/0:2,0:2:6.02:0,6,82	./.
chr10	73478648	.	C	CGAGCCG	4261.13	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=0.995;DP=600;FS=1.872;HRun=0;HaplotypeScore=136.3870;InbreedingCoeff=0.9673;MQ=57.59;MQ0=6;MQRankSum=-9.177;QD=53.26;ReadPosRankSum=-2.891;VQSLOD=4.5447;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:78.20:0,78,1714	0/0:13,0:13:24.03:0,24,498	0/0:18,0:7:18.06:0,18,393	0/0:21,0:14:42.10:0,42,852	0/0:13,0:13:22.32:0,22,482	0/0:21,0:21:60.16:0,60,1312	0/0:26,0:26:72.18:0,72,1593	0/0:27,0:26:72.19:0,72,1544	0/0:18,0:18:54.19:0,54,1233	1/1:12,8:24:60.15:1578,60,0	1/1:6,3:13:12.04:318,12,0	0/0:21,0:21:51.16:0,51,1119	0/0:17,0:17:42.04:0,42,815	0/0:18,0:18:48.12:0,48,1044	0/0:29,0:29:81.26:0,81,1798	0/0:25,0:25:69.24:0,69,1570	0/0:34,0:34:93.29:0,93,2077	1/1:11,12:25:54.19:1875,54,0	0/0:34,0:31:67.35:0,67,1379	0/0:14,0:17:18.06:0,18,411	0/0:35,0:35:93.27:0,93,2029	0/0:8,0:8:18.06:0,18,390	0/0:12,0:12:16.97:0,17,305	0/0:24,0:24:72.25:0,72,1636	1/1:7,3:18:18.06:491,18,0	0/0:26,0:26:60.08:0,60,1252	0/0:23,0:23:63.22:0,63,1437	0/0:5,0:5:10.85:0,11,210
chr10	73479124	.	AAAAAAAAAAAAAAAACC	A	958.07	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=2.171;DP=599;FS=14.027;HRun=0;HaplotypeScore=195.5055;InbreedingCoeff=0.1078;MQ=40.04;MQ0=62;MQRankSum=-0.723;QD=8.26;ReadPosRankSum=-0.260;VQSLOD=1.5393;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,27:40:1.86:690,2,0	0/0:8,0:8:21.07:0,21,811	0/0:57,0:7:15:0,15,169	0/0:65,0:5:10.75:0,11,223	0/0:27,0:24:63.54:0,64,2050	0/0:15,0:15:45.15:0,45,1723	0/0:12,0:9:27.09:0,27,1019	0/0:24,0:19:7.54:0,8,1156	0/0:13,0:13:36.12:0,36,1335	0/0:17,0:14:34.67:0,35,544	0/0:15,0:14:12.20:0,12,353	0/0:18,0:16:42.09:0,42,1110	0/0:17,0:14:21.04:0,21,410	0/0:11,0:11:30.09:0,30,1120	0/0:11,0:10:24.06:0,24,894	0/0:14,0:12:33.11:0,33,1465	0/1:28,0:27:9.72:10,0,1914	0/1:15,0:14:99:345,0,119	0/0:26,0:19:56.77:0,57,1875	0/0:13,0:13:39.13:0,39,1388	0/0:3,0:2:6.02:0,6,224	0/1:16,0:15:8.01:8,0,368	0/0:17,0:16:11.91:0,12,792	0/1:14,0:12:18.81:19,0,178	0/0:17,0:16:25.09:0,25,448	0/0:26,0:24:69.06:0,69,1929	0/0:22,0:22:21.65:0,22,1980	0/0:35,0:23:48.16:0,48,1853
chr10	73479139	.	ACC	A	7938.67	PASS	AB=0.976;AC=54;AF=0.964;AN=56;BaseQRankSum=-2.306;DP=446;FS=21.288;HRun=2;HaplotypeScore=61.4249;InbreedingCoeff=-0.0526;MQ=52.26;MQ0=34;MQRankSum=0.270;QD=17.80;ReadPosRankSum=1.416;VQSLOD=0.9317;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:32:18.01:189,18,0	1/1:5,0:5:12.02:139,12,0	0/1:39,1:11:36.05:36,0,37	0/1:40,1:7:31.92:32,0,33	1/1:21,0:20:53.14:556,53,0	1/1:10,0:11:26:246,26,0	1/1:12,0:11:29.62:318,30,0	1/1:23,0:20:56.54:658,57,0	1/1:11,1:12:25.13:216,25,0	1/1:2,11:11:27.09:348,27,0	1/1:11,2:12:33.08:396,33,0	1/1:11,1:11:22.27:163,22,0	1/1:7,1:8:10.96:71,11,0	1/1:9,0:9:19.37:158,19,0	1/1:8,0:9:21.02:222,21,0	1/1:7,0:6:5.12:20,5,0	1/1:26,0:25:53.32:496,53,0	1/1:6,6:12:33:397,33,0	1/1:23,1:21:20.07:573,20,0	1/1:10,1:11:27.86:284,28,0	1/1:4,0:4:8.76:90,9,0	1/1:2,14:16:26.75:297,27,0	1/1:9,1:10:30.07:364,30,0	1/1:5,0:6:6.01:65,6,0	1/1:13,1:13:38.77:445,39,0	1/1:21,1:22:59.50:697,59,0	1/1:14,1:16:35.23:422,35,0	1/1:4,0:3:3.01:41,3,0
chr10	73480139	.	C	CA	389.78	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.806;DP=634;FS=10.345;HRun=8;HaplotypeScore=63.1313;InbreedingCoeff=0.9595;MQ=70.46;MQ0=0;MQRankSum=1.369;QD=18.56;ReadPosRankSum=0.844;VQSLOD=2.7823;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:42.12:485,42,0	0/0:9,0:9:18:0,18,165	0/0:28,0:23:33.07:0,33,273	0/0:18,0:14:23.28:0,23,166	0/0:35,0:35:83.48:0,83,737	0/0:17,0:17:45.01:0,45,408	0/0:25,0:25:68.98:0,69,617	0/0:31,0:31:72:0,72,646	0/0:21,0:21:44.98:0,45,406	0/0:32,0:31:81:0,81,732	0/0:19,0:19:53.88:0,54,472	0/0:24,0:24:69:0,69,621	0/0:19,0:19:48:0,48,432	0/0:17,0:17:48.02:0,48,439	0/0:23,0:23:57.01:0,57,517	0/0:20,0:20:54.01:0,54,491	0/0:27,0:27:68.98:0,69,620	0/0:12,0:12:30.01:0,30,275	0/0:24,0:24:53.90:0,54,466	0/0:25,0:25:68.09:0,68,615	0/0:19,0:19:51.03:0,51,467	0/0:29,0:29:84.01:0,84,758	0/0:25,0:25:60:0,60,544	0/0:29,0:29:77.96:0,78,698	0/0:21,0:21:60:0,60,540	0/0:32,0:32:81.01:0,81,734	0/0:25,0:25:72.02:0,72,653	0/0:7,0:7:12.01:0,12,110
chr10	73480793	.	GGT	G	3457.18	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=8.610;DP=629;FS=0.405;HRun=0;HaplotypeScore=91.4683;InbreedingCoeff=0.7440;MQ=81.10;MQ0=0;MQRankSum=-3.559;QD=17.46;ReadPosRankSum=-3.030;VQSLOD=3.1400;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:57.12:57,0,71	0/0:10,0:10:27.08:0,27,457	0/0:24,0:25:50.34:0,50,951	0/0:16,0:16:32.76:0,33,526	0/0:24,0:24:69.16:0,69,1043	0/0:14,0:14:42.11:0,42,658	0/0:20,0:20:60.19:0,60,979	0/0:27,0:27:78.02:0,78,1210	0/0:32,0:32:96.31:0,96,1574	1/1:12,1:13:16.40:216,16,0	0/1:9,0:9:17.16:63,0,17	1/1:1,19:20:30.10:453,30,0	1/1:1,25:26:57.05:838,57,0	0/0:29,0:29:87.28:0,87,1419	0/0:33,0:33:96.29:0,96,1552	0/0:32,0:32:90.22:0,90,1440	0/0:29,0:29:84.28:0,84,1422	1/1:2,12:14:30.09:434,30,0	0/0:22,0:22:63.16:0,63,937	0/0:30,0:30:87.28:0,87,1442	0/0:28,0:28:81.27:0,81,1361	1/1:3,22:25:35.79:502,36,0	1/1:4,14:18:21.02:273,21,0	1/1:0,17:17:36.12:544,36,0	0/1:18,0:18:60.59:78,0,61	0/0:25,0:25:63.18:0,63,1056	0/0:29,0:29:83.76:0,84,1276	0/0:6,0:6:18.06:0,18,304
chr10	73480794	.	GT	G	2435.42	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=11.912;DP=632;FS=0.747;HRun=1;HaplotypeScore=82.7456;InbreedingCoeff=0.9963;MQ=81.60;MQ0=0;MQRankSum=-3.201;QD=12.30;ReadPosRankSum=-2.524;VQSLOD=1.3253;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:39:76.89:387,77,0	0/0:10,0:10:27.08:0,27,358	0/0:24,1:26:37.26:0,37,741	0/0:16,0:16:37.57:0,38,452	0/0:25,0:25:72.13:0,72,851	0/0:14,0:14:42.10:0,42,526	0/0:21,0:21:63.16:0,63,788	0/0:29,0:29:80.99:0,81,992	0/0:32,0:32:96.20:0,96,1216	1/1:10,3:13:31.51:296,32,0	1/1:9,0:9:17.78:133,18,0	1/1:19,0:19:29.83:220,30,0	1/1:26,0:26:56.63:414,57,0	0/0:30,0:30:90.05:0,90,1118	0/0:32,0:32:96.27:0,96,1214	0/0:32,0:32:93.20:0,93,1165	0/0:28,0:28:84.28:0,84,1113	1/1:13,1:14:29.81:219,30,0	0/0:21,0:21:63.16:0,63,759	0/0:31,0:31:90.27:0,90,1158	0/0:27,0:27:81.25:0,81,1058	1/1:22,3:25:36.36:311,36,0	1/1:16,2:18:20.83:149,21,0	1/1:17,0:17:35.80:265,36,0	1/1:18,0:18:28.58:261,29,0	0/0:25,0:25:63.14:0,63,821	0/0:29,0:29:76.73:0,77,990	0/0:6,0:6:18.06:0,18,238
chr10	73481366	.	C	CA	723.02	PASS	AB=0.973;AC=3;AF=0.054;AN=56;BaseQRankSum=-2.417;DP=691;FS=1.559;HRun=8;HaplotypeScore=69.2971;InbreedingCoeff=0.6762;MQ=65.98;MQ0=4;MQRankSum=1.186;QD=10.95;ReadPosRankSum=-1.391;VQSLOD=2.2791;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:72.17:816,72,0	0/0:10,0:10:30.02:0,30,274	0/1:35,0:26:8.36:8,0,298	0/0:31,0:20:34.28:0,34,311	0/0:39,0:39:99:0,108,984	0/0:19,0:19:42.01:0,42,384	0/0:18,0:18:32.99:0,33,302	0/0:21,0:21:39.45:0,39,498	0/0:20,0:20:51.01:0,51,462	0/0:38,0:38:90.03:0,90,824	0/0:21,0:21:57.01:0,57,517	0/0:18,0:18:45.02:0,45,411	0/0:22,0:22:54.02:0,54,494	0/0:21,0:21:56.99:0,57,511	0/0:23,0:24:71.07:0,71,637	0/0:19,0:19:48.02:0,48,439	0/0:29,0:29:87.05:0,87,796	0/0:18,0:18:51.03:0,51,466	0/0:27,0:27:66.02:0,66,601	0/0:27,0:27:72.02:0,72,654	0/0:25,0:25:63.01:0,63,576	0/0:23,0:23:66.04:0,66,604	0/0:26,0:26:75.04:0,75,686	0/0:23,0:23:53.88:0,54,494	0/0:38,0:38:99:0,102,933	0/0:23,1:24:19.37:0,19,422	0/0:31,0:30:74.98:0,75,676	0/0:13,0:13:39.02:0,39,357
chr10	73481967	.	CA	C	160.19	PASS	AB=0.988;AC=9;AF=0.167;AN=54;BaseQRankSum=7.403;DP=413;FS=7.264;HRun=11;HaplotypeScore=91.4643;InbreedingCoeff=0.2274;MQ=42.09;MQ0=20;MQRankSum=-5.678;QD=1.98;ReadPosRankSum=-0.717;VQSLOD=-0.6332;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:5:3.48:0,3,33	0/0:4,0:4:12.04:0,12,150	./.	0/0:9,0:1:2.04:0,2,6	0/0:31,0:29:66.77:0,67,743	0/0:8,0:8:24.06:0,24,290	0/0:14,0:13:29.89:0,30,321	0/0:27,0:22:61.02:0,61,687	0/0:16,0:15:30.06:0,30,335	0/1:14,0:12:30.51:31,0,48	0/1:14,1:15:10.40:10,0,33	0/1:3,0:3:10.35:10,0,31	0/1:7,0:7:36.97:37,0,42	0/0:11,0:10:20.65:0,21,226	0/0:11,0:11:21.05:0,21,244	0/0:9,0:9:22.52:0,23,211	0/0:23,0:23:54.13:0,54,633	0/0:14,0:13:11.01:0,11,70	0/0:27,0:24:54.13:0,54,647	0/0:31,0:29:48.79:0,49,745	0/0:10,0:6:15.05:0,15,185	0/0:12,0:12:4.64:0,5,134	0/1:16,0:17:15.19:71,0,15	1/1:8,0:7:7.34:28,7,0	1/1:13,4:14:6.53:109,7,0	0/0:24,0:21:52.95:0,53,618	0/0:23,0:22:45.93:0,46,561	0/0:9,0:7:17.03:0,17,176
chr10	73481972	.	AAAC	A	879.39	PASS	AB=0.935;AC=16;AF=0.296;AN=54;BaseQRankSum=10.224;DP=445;FS=4.810;HRun=0;HaplotypeScore=112.0430;InbreedingCoeff=0.5976;MQ=42.69;MQ0=22;MQRankSum=-8.303;QD=6.37;ReadPosRankSum=-4.236;VQSLOD=0.9357;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:6:7.83:0,8,72	0/0:4,0:4:12.04:0,12,213	./.	0/1:12,0:3:0.02:1,0,0	0/0:30,0:28:60.22:0,60,1093	0/0:8,0:8:24.08:0,24,457	0/0:14,0:13:29.44:0,29,491	0/0:29,0:25:48.50:0,49,881	0/0:15,0:14:30.10:0,30,501	0/1:17,2:17:56.64:128,0,57	1/1:14,4:18:16.18:274,16,0	1/1:7,0:7:10.88:58,11,0	1/1:9,0:9:3.62:60,4,0	0/0:12,0:11:24.06:0,24,372	0/0:12,0:12:23.67:0,24,387	0/0:9,0:9:25.24:0,25,346	0/0:23,0:23:53.51:0,54,874	0/1:12,0:11:28.12:28,0,61	0/0:27,0:22:51.64:0,52,892	0/0:29,1:28:73.06:0,73,1320	0/0:10,0:6:15.05:0,15,280	1/1:12,0:12:2.23:72,2,0	1/1:20,0:19:6.02:134,6,0	1/1:9,0:7:16.81:94,17,0	0/1:16,4:17:6.68:201,0,7	0/0:26,1:24:28.07:0,28,1055	0/0:22,0:21:47.93:0,48,891	0/0:13,0:11:14.95:0,15,391
chr10	73481973	.	AAC	A	1012.02	PASS	AB=0.976;AC=14;AF=0.259;AN=54;BaseQRankSum=8.131;DP=446;FS=0.000;HRun=0;HaplotypeScore=105.3144;InbreedingCoeff=0.5449;MQ=42.79;MQ0=21;MQRankSum=-6.917;QD=8.16;ReadPosRankSum=-5.141;VQSLOD=2.1039;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:6:6.90:0,7,77	0/0:4,0:4:12.03:0,12,171	./.	0/0:13,0:4:1.22:0,1,2	0/0:31,0:29:48.62:0,49,883	0/0:8,0:8:24.08:0,24,379	0/0:14,0:13:32.43:0,32,429	0/0:30,0:25:47.58:0,48,820	0/0:15,0:14:29.57:0,30,380	0/1:17,2:17:63.71:89,0,64	1/1:17,1:18:6.96:177,7,0	1/1:7,0:7:17.01:120,17,0	0/1:9,0:9:6.93:159,0,7	0/0:12,0:11:23.98:0,24,280	0/0:12,0:12:23.67:0,24,323	0/0:9,0:9:23.69:0,24,285	0/0:23,0:23:52.94:0,53,729	0/1:12,0:11:49.39:49,0,52	0/0:27,0:22:51.75:0,52,763	0/0:30,0:28:63.84:0,64,1066	0/0:11,0:7:15.03:0,15,229	0/1:12,0:12:32.72:64,0,33	1/1:19,0:18:5.65:219,6,0	1/1:9,0:7:17.45:170,17,0	1/1:16,3:17:16.25:137,16,0	0/0:27,0:24:50.54:0,51,861	0/0:22,0:21:47.71:0,48,737	0/0:13,0:11:14.81:0,15,300
chr10	73481974	.	AC	A	1149.73	PASS	AB=0.952;AC=15;AF=0.268;AN=56;BaseQRankSum=11.398;DP=446;FS=4.292;HRun=1;HaplotypeScore=94.0713;InbreedingCoeff=0.6609;MQ=42.75;MQ0=21;MQRankSum=-7.961;QD=9.27;ReadPosRankSum=-3.458;VQSLOD=-0.0422;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:6:5.94:0,6,55	0/0:4,0:4:11.71:0,12,123	0/0:9,0:1:0:0,0,0	0/0:16,0:4:2.49:0,2,6	0/0:30,0:28:40.19:0,40,636	0/0:8,0:8:24.08:0,24,297	0/0:15,0:14:35.14:0,35,345	0/0:30,0:25:29.65:0,30,628	0/0:14,0:13:28.51:0,29,265	0/1:19,0:17:22.62:119,0,23	1/1:18,0:18:10.85:165,11,0	1/1:6,1:7:11.14:107,11,0	1/1:5,4:9:4.54:162,5,0	0/0:12,0:11:23.91:0,24,211	0/0:12,0:12:23.51:0,24,243	0/0:9,0:9:15.54:0,16,214	0/0:23,0:23:53.11:0,53,552	0/1:12,0:11:36.17:43,0,36	0/0:26,0:21:51.52:0,52,580	0/0:30,0:28:24.42:0,24,774	0/0:11,0:7:14.95:0,15,168	0/1:10,2:12:0.83:85,0,1	1/1:13,6:18:28:306,28,0	1/1:5,4:7:17.89:143,18,0	1/1:19,0:17:36.66:200,37,0	0/0:26,0:23:53.86:0,54,667	0/0:21,0:20:36.12:0,36,544	0/0:13,0:11:11.16:0,11,218
chr10	73481975	.	CA	C	374.19	PASS	AB=0.875;AC=15;AF=0.268;AN=56;BaseQRankSum=9.156;DP=450;FS=5.870;HRun=7;HaplotypeScore=99.5577;InbreedingCoeff=0.5449;MQ=44.31;MQ0=21;MQRankSum=-7.617;QD=2.99;ReadPosRankSum=-0.899;VQSLOD=-0.5560;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:6:8.97:0,9,91	0/0:4,0:4:12.04:0,12,149	1/1:11,0:2:2.16:7,2,0	0/0:17,0:4:3.07:0,3,11	0/0:29,0:28:48.32:0,48,807	0/0:9,0:9:27.08:0,27,328	0/0:15,0:14:36.09:0,36,419	0/0:28,0:23:57.64:0,58,698	0/0:14,0:13:29.82:0,30,331	0/1:15,5:17:17.59:101,0,18	0/1:15,4:19:32.21:47,0,32	1/1:7,0:7:5.94:27,6,0	0/1:10,0:10:4.74:49,0,5	0/0:12,0:11:21.06:0,21,247	0/0:12,0:12:24.08:0,24,297	0/0:9,0:9:23.41:0,23,246	0/0:22,0:22:51.09:0,51,602	0/0:11,0:11:13.03:0,13,92	0/0:27,0:22:54.04:0,54,627	0/0:30,0:28:62.78:0,63,852	0/0:11,0:7:15.02:0,15,173	1/1:12,0:12:6.12:65,6,0	1/1:19,0:18:5.94:92,6,0	1/1:9,0:7:7.34:28,7,0	1/1:14,4:16:1.41:115,1,0	0/0:26,0:23:68.02:0,68,818	0/0:21,0:20:50.75:0,51,606	0/0:13,0:11:29.07:0,29,313
chr10	73481999	.	CA	C	237.64	PASS	AB=0.910;AC=18;AF=0.321;AN=56;BaseQRankSum=4.395;DP=571;FS=1.045;HRun=14;HaplotypeScore=114.7090;InbreedingCoeff=0.4122;MQ=50.97;MQ0=39;MQRankSum=-2.391;QD=1.02;ReadPosRankSum=1.515;VQSLOD=-0.0880;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:9:14.72:0,15,57	0/1:6,0:6:5.46:5,0,90	0/0:52,1:11:4.14:0,4,38	0/1:59,0:9:0.16:0,0,59	0/0:29,0:30:35.94:0,36,461	0/0:10,1:13:0.29:0,0,133	0/0:18,0:20:31.98:0,32,298	0/0:28,0:23:21.47:0,21,422	0/0:16,0:15:15.32:0,15,258	0/0:19,0:17:40.64:0,41,170	0/0:21,0:21:49.19:0,49,221	1/1:11,0:11:14.04:40,14,0	1/1:10,0:10:16.07:46,16,0	0/0:8,0:8:20.86:0,21,180	0/0:11,1:12:0.47:0,0,142	0/0:13,0:13:26.99:0,27,241	0/0:20,1:21:11.88:0,12,215	1/1:7,0:6:1.02:7,1,0	0/1:20,10:22:25.57:166,0,26	0/1:23,3:25:0.81:1,0,390	0/1:8,1:10:9.92:10,0,37	1/1:16,0:16:0.86:27,1,0	1/1:19,0:17:21.11:60,21,0	1/1:11,0:9:12.17:35,12,0	0/0:22,0:21:41.25:0,41,180	0/0:29,0:30:70.77:0,71,647	0/1:23,2:26:2.02:2,0,325	0/0:12,1:12:6.04:0,6,174
chr10	73482005	.	A	AC	1625.34	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.902;DP=591;FS=2.537;HRun=0;HaplotypeScore=108.4057;InbreedingCoeff=0.8666;MQ=50.96;MQ0=39;MQRankSum=1.790;QD=21.11;ReadPosRankSum=2.111;VQSLOD=5.5080;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,7:10:1.51:200,2,0	0/0:6,0:6:18.01:0,18,199	0/0:66,0:12:2.34:0,2,60	0/0:68,0:12:19.54:0,20,120	0/0:29,0:29:75.94:0,76,884	0/0:16,0:15:30.48:0,30,332	0/0:18,0:18:45.46:0,45,517	0/0:32,0:27:73.34:0,73,875	0/0:18,0:17:42.06:0,42,489	1/1:4,18:20:50.81:551,51,0	1/1:5,16:21:46.47:506,46,0	0/0:11,0:11:26.63:0,27,215	0/0:9,0:9:26.89:0,27,229	0/0:10,0:10:21.93:0,22,256	0/0:12,0:12:29.98:0,30,326	0/0:14,0:14:38.94:0,39,457	0/0:18,0:18:41.89:0,42,462	0/0:5,0:4:11.84:0,12,95	0/0:27,0:22:62.90:0,63,563	0/0:24,0:24:66.60:0,67,806	0/0:9,0:9:14.11:0,14,148	0/0:18,0:18:36.53:0,37,277	0/0:19,0:16:37.31:0,37,294	0/0:12,0:10:26.25:0,26,204	1/1:5,15:19:38.67:518,39,0	0/0:32,1:30:53.62:0,54,1041	0/0:27,0:25:52.74:0,53,640	0/0:13,0:12:33.04:0,33,399
chr10	73482010	.	AAAAC	A	2225.61	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=3.855;DP=602;FS=0.000;HRun=0;HaplotypeScore=128.0139;InbreedingCoeff=0.9441;MQ=53.56;MQ0=43;MQRankSum=-4.507;QD=26.50;ReadPosRankSum=0.695;VQSLOD=3.1773;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:10:13.72:124,14,0	0/0:6,0:6:18.06:0,18,376	0/0:71,0:14:6.61:0,7,209	0/0:73,0:16:6.75:0,7,140	0/0:30,0:30:78.22:0,78,1615	0/0:15,0:14:33.05:0,33,617	0/0:18,0:18:45.12:0,45,899	0/0:30,0:26:75.17:0,75,1518	0/0:18,0:18:48.07:0,48,921	0/0:22,0:20:55.70:0,56,838	0/0:23,0:23:61.41:0,61,912	1/1:5,5:10:20.89:326,21,0	1/1:1,8:8:24.08:416,24,0	0/0:10,0:10:30.05:0,30,571	0/0:15,0:15:39.04:0,39,648	0/0:14,0:14:42.10:0,42,832	0/0:18,0:18:48.10:0,48,960	1/1:6,0:4:12.03:137,12,0	0/0:25,0:20:54.06:0,54,722	0/0:25,0:25:75.19:0,75,1539	0/0:10,0:10:24.04:0,24,334	1/1:2,14:16:24.14:531,24,0	1/1:3,15:15:35.83:549,36,0	1/1:7,5:10:9.50:336,9,0	0/0:21,0:19:39.62:0,40,815	0/0:34,0:30:82.82:0,83,1956	0/0:26,0:24:69.18:0,69,1310	0/0:14,0:13:36.08:0,36,711
chr10	73482011	.	AAAC	A	1317.56	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=5.681;DP=602;FS=0.524;HRun=0;HaplotypeScore=123.0116;InbreedingCoeff=0.9580;MQ=53.67;MQ0=41;MQRankSum=-4.461;QD=15.69;ReadPosRankSum=0.352;VQSLOD=3.2363;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:10:4.44:71,4,0	0/0:6,0:6:18.04:0,18,304	0/0:71,0:14:28.28:0,28,253	0/0:73,0:16:23.36:0,23,178	0/0:30,0:30:78.14:0,78,1331	0/0:16,0:15:36:0,36,545	0/0:18,0:18:44.75:0,45,766	0/0:30,0:27:77.50:0,77,1284	0/0:18,0:18:45.10:0,45,755	0/0:23,0:21:58.68:0,59,693	0/0:23,0:23:62.38:0,62,777	1/1:7,3:10:21.01:217,21,0	1/1:9,0:8:24.04:230,24,0	0/0:10,0:10:30.05:0,30,506	0/0:15,0:15:36.03:0,36,526	0/0:14,0:14:42.08:0,42,716	0/0:18,0:18:45.09:0,45,740	1/1:6,0:4:11.89:101,12,0	0/0:25,0:20:49.90:0,50,498	0/0:25,0:25:69.18:0,69,1236	0/0:9,0:10:24.01:0,24,276	1/1:16,0:16:23.66:323,24,0	1/1:18,0:15:35.90:347,36,0	1/1:12,1:11:11.72:218,12,0	0/0:21,0:19:39.61:0,40,634	0/0:33,0:29:79.51:0,80,1593	0/0:26,0:24:68.76:0,69,1073	0/0:13,0:12:33.03:0,33,578
chr10	73482040	.	C	CAAA	85.18	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.119;DP=554;FS=0.000;HRun=7;HaplotypeScore=114.1195;InbreedingCoeff=0.9504;MQ=64.75;MQ0=11;MQRankSum=-2.863;QD=7.10;ReadPosRankSum=0.006;VQSLOD=-0.5437;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,5:11:12:171,12,0	0/0:8,0:8:21.06:0,21,281	0/0:32,0:17:40.62:0,41,462	0/0:33,0:14:17.91:0,18,325	0/0:23,0:23:57:0,57,769	0/0:16,0:16:36.08:0,36,470	0/0:21,0:21:54.14:0,54,708	0/0:23,0:23:60.15:0,60,750	0/0:13,0:13:33.10:0,33,448	0/0:31,0:31:78.23:0,78,1042	0/0:23,0:22:57.13:0,57,756	0/0:14,0:14:33.09:0,33,447	0/0:19,0:18:48.12:0,48,624	0/0:12,0:12:33.10:0,33,445	0/0:17,0:17:45.14:0,45,610	0/0:19,0:19:51.13:0,51,661	0/0:14,0:14:29.96:0,30,404	0/0:11,0:10:24.06:0,24,307	0/0:17,0:17:27.05:0,27,340	0/0:28,0:28:72.19:0,72,955	0/0:14,0:14:36.09:0,36,469	0/0:18,0:18:54.18:0,54,728	0/0:21,0:20:32.65:0,33,435	0/0:12,0:12:27.07:0,27,368	0/0:28,0:27:75.24:0,75,1008	0/0:27,0:26:60.16:0,60,813	0/0:29,0:29:80.78:0,81,1099	0/0:17,0:17:48.11:0,48,603
chr10	73482812	.	AT	A	368.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.516;DP=497;FS=4.788;HRun=8;HaplotypeScore=44.4202;InbreedingCoeff=0.8182;MQ=70.26;MQ0=0;MQRankSum=-2.887;QD=20.49;ReadPosRankSum=0.785;VQSLOD=3.2425;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:48.08:464,48,0	0/0:8,0:8:21.06:0,21,254	0/0:7,0:7:21.06:0,21,245	0/0:6,0:6:9.03:0,9,109	0/0:39,0:39:99:0,108,1305	0/0:10,0:9:27.08:0,27,326	0/0:15,0:15:33.10:0,33,399	0/0:33,0:33:90.28:0,90,1087	0/0:16,0:16:48.15:0,48,580	0/0:28,0:28:81.25:0,81,978	0/0:21,0:21:57.16:0,57,677	0/0:16,0:16:45.13:0,45,532	0/0:20,0:20:48.15:0,48,580	0/0:14,0:14:36.11:0,36,435	0/0:17,0:17:51.16:0,51,616	0/0:22,0:22:66.19:0,66,787	0/0:18,1:19:28.22:0,28,623	0/0:12,0:12:33.10:0,33,399	0/0:21,0:21:57.17:0,57,685	0/0:23,0:23:63.19:0,63,761	0/0:4,0:4:12.02:0,12,132	0/0:14,0:14:39.12:0,39,471	0/0:15,0:15:42.13:0,42,507	0/0:6,0:6:15.05:0,15,181	0/0:31,0:31:87.24:0,87,1037	0/0:23,0:23:69.18:0,69,818	0/0:36,0:36:99:0,102,1222	0/0:3,0:3:6.02:0,6,72
chr10	73483147	.	G	GT	3869.73	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-10.848;DP=439;FS=0.000;HRun=8;HaplotypeScore=38.8135;InbreedingCoeff=0.9809;MQ=64.59;MQ0=3;MQRankSum=0.311;QD=25.46;ReadPosRankSum=0.807;VQSLOD=3.8464;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:96.02:0,96,872	0/0:5,0:5:12:0,12,110	0/0:13,0:8:16.91:0,17,141	0/0:10,0:6:11.94:0,12,100	0/0:24,0:24:66.02:0,66,598	0/0:14,0:14:42.02:0,42,384	0/0:19,0:19:57.03:0,57,521	0/0:28,0:28:75.02:0,75,679	0/0:6,0:6:15:0,15,137	1/1:2,17:19:51.13:576,51,0	1/1:3,7:10:21.06:239,21,0	0/0:14,0:14:38.98:0,39,347	0/0:18,0:17:48.02:0,48,439	0/0:12,0:12:30:0,30,270	0/0:9,0:9:24.01:0,24,219	0/0:19,0:19:57.03:0,57,522	0/0:25,0:25:57:0,57,522	1/1:1,16:17:36.11:416,36,0	1/1:12,12:24:14.70:422,15,0	1/1:3,13:16:39.11:446,39,0	1/1:0,11:11:30.09:346,30,0	0/0:9,0:9:24.01:0,24,219	0/0:11,0:11:21:0,21,192	0/0:12,0:12:27:0,27,247	1/1:0,9:9:21.06:242,21,0	1/1:1,17:18:47.99:544,48,0	1/1:1,15:17:35.94:395,36,0	1/1:3,8:10:21.06:242,21,0
chr10	73485160	.	GA	G	482.29	PASS	AB=0.805;AC=10;AF=0.179;AN=56;BaseQRankSum=3.691;DP=409;FS=9.640;HRun=12;HaplotypeScore=46.1490;InbreedingCoeff=0.4328;MQ=62.03;MQ0=6;MQRankSum=1.013;QD=6.61;ReadPosRankSum=2.790;VQSLOD=0.8900;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:32:45.88:0,46,259	0/1:3,1:4:14.22:14,0,52	0/0:18,0:12:13.84:0,14,157	0/0:13,0:6:9.32:0,9,76	0/0:20,1:23:42.53:0,43,566	0/0:18,0:20:39.15:0,39,459	0/0:7,0:7:6.60:0,7,155	0/0:43,2:42:53.84:0,54,854	0/0:10,0:10:21:0,21,195	1/1:0,4:4:11.95:93,12,0	1/1:2,12:13:35.84:279,36,0	0/0:8,0:9:26.89:0,27,258	0/0:11,0:11:27.04:0,27,266	0/0:4,0:4:12.02:0,12,122	0/0:8,0:8:18.04:0,18,183	0/0:6,0:6:12.02:0,12,122	0/0:32,2:35:69.70:0,70,843	0/1:16,3:20:18.77:19,0,359	0/0:27,0:29:77.79:0,78,738	0/0:9,1:10:0.81:0,1,190	0/0:4,0:4:8.99:0,9,82	0/0:4,0:4:12.02:0,12,122	0/1:1,1:2:17.04:17,0,17	0/0:5,0:5:12.02:0,12,122	1/1:1,13:14:26.89:209,27,0	0/0:23,0:24:49.81:0,50,490	0/0:17,0:17:45.01:0,45,436	0/1:13,2:15:7.41:7,0,289
chr10	73485244	.	T	TCG	1597.73	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-4.945;DP=537;FS=10.267;HRun=0;HaplotypeScore=62.2758;InbreedingCoeff=0.9897;MQ=85.44;MQ0=0;MQRankSum=-0.556;QD=39.94;ReadPosRankSum=-3.006;VQSLOD=4.2703;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:93.31:0,93,1331	0/0:10,0:10:30.07:0,30,408	0/0:15,0:15:36.11:0,36,492	0/0:19,0:19:51.14:0,51,696	0/0:17,0:17:51.17:0,51,731	0/0:25,0:25:66.22:0,66,945	0/0:30,0:30:87.26:0,87,1209	0/0:31,0:31:93.30:0,93,1290	0/0:14,0:14:42.14:0,42,601	1/1:1,17:19:56.82:916,57,0	1/1:5,6:11:21.07:384,21,0	0/0:19,0:19:54.18:0,54,772	0/0:26,0:26:75.25:0,75,1073	0/0:20,0:20:60.20:0,60,859	0/0:17,0:17:48.16:0,48,688	0/0:18,0:18:54.18:0,54,774	0/0:44,0:44:99:0,129,1805	0/0:21,0:21:63.21:0,63,902	0/0:18,0:18:54.16:0,54,739	0/0:8,0:8:24.08:0,24,344	0/0:35,0:35:99:0,99,1418	0/0:15,0:15:42.14:0,42,602	0/0:9,0:8:21.06:0,21,283	0/0:16,0:16:48.16:0,48,687	1/1:2,8:10:24.08:439,24,0	0/0:15,0:15:45.15:0,45,645	0/0:13,0:13:39.13:0,39,558	0/0:5,0:5:15.05:0,15,215
chr10	73486800	.	GA	G	705.31	PASS	AB=0.822;AC=6;AF=0.107;AN=56;BaseQRankSum=8.993;DP=631;FS=8.103;HRun=3;HaplotypeScore=113.9365;InbreedingCoeff=-0.1179;MQ=59.14;MQ0=2;MQRankSum=-8.104;QD=4.77;ReadPosRankSum=-2.282;VQSLOD=-0.6519;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:68.55:0,69,1162	0/0:5,0:5:15.04:0,15,198	0/0:24,0:14:38.81:0,39,450	0/0:23,0:14:38.71:0,39,500	0/0:16,0:16:48.13:0,48,640	0/0:20,0:20:57.18:0,57,801	0/0:32,1:33:62.59:0,63,1307	0/0:26,0:26:78.26:0,78,1117	0/0:24,0:24:66.21:0,66,934	0/1:21,10:29:99:258,0,723	0/0:14,1:15:8.63:0,9,557	0/1:18,7:24:99:199,0,563	0/1:17,10:26:99:234,0,525	0/0:25,0:25:72.24:0,72,1037	0/0:24,0:24:69.15:0,69,912	0/0:31,0:31:93.29:0,93,1304	0/0:35,0:34:99:0,102,1433	0/1:20,0:20:3.40:3,0,443	0/0:15,0:14:42.13:0,42,585	0/0:12,0:12:36.12:0,36,517	0/0:38,0:37:99:0,105,1415	0/1:12,3:15:99:99,0,343	0/0:9,0:8:17.21:0,17,192	0/1:24,6:28:31.09:31,0,708	0/0:23,1:24:14.66:0,15,750	0/0:25,0:25:75.25:0,75,1077	0/0:19,0:19:54.16:0,54,755	0/0:6,0:6:18.03:0,18,220
chr10	73486813	.	GA	G	1558.07	PASS	AB=0.788;AC=10;AF=0.179;AN=56;BaseQRankSum=10.425;DP=648;FS=1.540;HRun=3;HaplotypeScore=113.0617;InbreedingCoeff=-0.2066;MQ=57.00;MQ0=4;MQRankSum=-7.026;QD=6.86;ReadPosRankSum=0.675;VQSLOD=0.5683;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,12:36:99:297,0,662	0/0:6,0:5:12.03:0,12,154	0/0:19,0:11:14.71:0,15,171	0/0:26,2:13:29.78:0,30,340	0/0:13,0:13:39.11:0,39,526	0/0:22,0:22:57.18:0,57,798	0/0:40,0:40:81.59:0,82,1516	0/0:24,0:24:66.11:0,66,902	0/0:28,0:28:81.26:0,81,1142	0/1:18,11:28:99:318,0,520	0/1:11,1:12:0.98:1,0,379	0/1:20,7:26:99:207,0,526	0/1:16,15:30:99:390,0,448	0/0:31,0:30:87.25:0,87,1190	0/0:20,0:20:52.71:0,53,717	0/0:37,0:37:99:0,111,1542	0/0:28,0:28:81.27:0,81,1155	0/1:14,1:16:11.86:12,0,167	0/0:17,0:14:42.06:0,42,556	0/0:13,0:13:39.13:0,39,558	0/0:38,0:38:99:0,108,1508	0/1:10,3:13:99:110,0,219	0/1:6,2:7:67.84:68,0,150	0/1:14,18:31:99:223,0,448	0/1:17,5:21:72.75:73,0,514	0/0:27,0:26:78.25:0,78,1088	0/0:21,0:21:63.18:0,63,853	0/0:9,0:9:27.09:0,27,373
chr10	73486814	.	A	AAAGG	3449.36	PASS	AB=0.900;AC=19;AF=0.352;AN=54;BaseQRankSum=12.422;DP=653;FS=2.496;HRun=0;HaplotypeScore=146.2502;InbreedingCoeff=0.9053;MQ=56.08;MQ0=4;MQRankSum=-10.356;QD=14.93;ReadPosRankSum=3.039;VQSLOD=3.3567;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:36:17.57:230,18,0	0/0:6,0:5:9.03:0,9,143	./.	0/0:28,0:13:8.68:0,9,82	0/0:14,0:14:21.07:0,21,338	0/0:20,0:20:6.19:0,6,587	0/0:40,0:40:51.84:0,52,1134	0/0:24,0:24:21.06:0,21,301	0/0:28,0:28:66.21:0,66,1014	1/1:28,0:26:55.28:661,55,0	1/1:12,0:12:26.78:314,27,0	1/1:24,0:28:38.98:430,39,0	1/1:31,0:30:48.85:497,49,0	0/0:32,0:31:63.20:0,63,968	0/0:20,0:21:45.13:0,45,667	0/0:37,0:37:84.26:0,84,1292	0/0:28,0:28:36.12:0,36,559	1/1:7,9:16:18.04:345,18,0	0/0:17,0:14:21.07:0,21,329	0/0:13,0:13:24.08:0,24,378	0/0:39,0:39:90.03:0,90,1364	1/1:10,0:14:29.30:350,29,0	0/1:8,0:8:3.24:55,0,3	1/1:33,0:32:19.55:215,20,0	1/1:22,0:21:30.18:353,30,0	0/0:27,0:26:57.18:0,57,870	0/0:21,0:21:51.15:0,51,773	0/0:9,0:9:21.07:0,21,315
chr10	73486822	.	G	GA	540.75	PASS	AB=0.727;AC=1;AF=0.018;AN=56;BaseQRankSum=4.830;DP=635;FS=4.410;HRun=2;HaplotypeScore=122.6904;InbreedingCoeff=-0.0306;MQ=53.60;MQ0=2;MQRankSum=-1.076;QD=13.52;ReadPosRankSum=-1.373;VQSLOD=2.4786;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:25,15:39:99:615,0,419	0/0:4,0:3:9.03:0,9,111	0/0:13,0:4:9.03:0,9,110	0/0:21,0:8:3.84:0,4,171	0/0:13,0:13:39.12:0,39,483	0/0:20,0:20:56.95:0,57,664	0/0:40,0:40:99:0,120,1418	0/0:21,0:21:60.17:0,60,728	0/0:30,0:30:84.26:0,84,1040	0/0:28,0:26:74.97:0,75,765	0/0:12,0:12:35.90:0,36,353	0/0:28,0:27:59.84:0,60,663	0/0:31,0:30:78.15:0,78,897	0/0:29,0:28:81.25:0,81,1003	0/0:21,0:21:59.98:0,60,718	0/0:34,0:34:99:0,102,1264	0/0:29,0:29:78.18:0,78,929	0/0:17,0:17:7.96:0,8,100	0/0:16,0:13:39.07:0,39,446	0/0:12,0:12:27.08:0,27,335	0/0:42,0:42:99:0,116,1409	0/0:15,0:15:42.02:0,42,443	0/0:9,0:8:24.07:0,24,291	0/0:31,0:30:61.82:0,62,664	0/0:24,0:23:61.89:0,62,593	0/0:25,0:24:72.22:0,72,882	0/0:21,0:21:57.18:0,57,704	0/0:9,0:9:27:0,27,300
chr10	73486842	.	GGC	G	1352.98	PASS	AB=0.834;AC=10;AF=0.179;AN=56;BaseQRankSum=9.399;DP=622;FS=4.497;HRun=0;HaplotypeScore=126.5533;InbreedingCoeff=-0.2212;MQ=57.24;MQ0=3;MQRankSum=-9.018;QD=6.47;ReadPosRankSum=-1.863;VQSLOD=2.4100;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,5:31:99:200,0,888	0/0:5,0:4:12.04:0,12,237	0/0:17,0:9:24.05:0,24,413	0/0:29,0:18:24.76:0,25,502	0/0:11,0:11:33.11:0,33,668	0/0:20,0:21:20.07:0,20,1138	0/0:39,0:39:90.93:0,91,2214	0/0:22,0:22:60.19:0,60,1175	0/0:34,0:34:99:0,102,2025	0/1:16,4:22:99:282,0,503	0/1:2,4:10:67.15:226,0,67	0/1:25,5:29:99:141,0,959	0/1:22,7:29:99:152,0,1036	0/0:27,0:26:78.27:0,78,1575	0/0:30,0:30:87.28:0,87,1701	0/0:34,0:34:99:0,102,2020	0/0:19,2:21:2.47:0,2,936	0/1:12,1:13:3.56:4,0,317	0/0:14,0:13:39.13:0,39,765	0/0:9,0:9:27.09:0,27,548	0/0:46,1:47:99:0,135,2582	0/1:9,4:13:99:119,0,315	0/1:5,3:7:76:76,0,231	0/1:25,3:27:67.32:67,0,939	0/1:17,2:20:99:227,0,477	0/0:23,0:22:66.23:0,66,1340	0/0:22,0:22:66.23:0,66,1338	0/0:7,0:7:21.07:0,21,426
chr10	73486847	.	G	GGAA	1282.97	PASS	AB=0.872;AC=8;AF=0.143;AN=56;BaseQRankSum=9.820;DP=634;FS=1.889;HRun=0;HaplotypeScore=146.6750;InbreedingCoeff=-0.1683;MQ=58.07;MQ0=1;MQRankSum=-9.919;QD=7.68;ReadPosRankSum=-1.575;VQSLOD=3.1248;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,1:31:99:104,0,884	0/0:5,0:5:12.03:0,12,175	0/0:21,0:12:27.07:0,27,400	0/0:34,0:22:18.47:0,18,467	0/0:11,0:11:33.11:0,33,572	0/0:23,0:23:55.75:0,56,1053	0/0:42,0:42:99:0,111,1886	0/0:20,0:20:54.15:0,54,890	0/0:35,0:35:99:0,105,1785	0/1:18,5:21:99:332,0,469	0/1:7,4:11:91.15:399,0,91	0/1:26,4:29:99:109,0,979	0/1:25,6:30:99:240,0,977	0/0:25,0:25:75.24:0,75,1284	0/0:30,0:30:87.24:0,87,1452	0/0:32,0:32:90.31:0,90,1567	0/0:20,0:20:35.26:0,35,732	0/0:13,0:13:29.61:0,30,420	0/0:13,0:13:39.13:0,39,678	0/0:10,0:10:30.10:0,30,529	0/0:48,0:48:99:0,100,2132	0/1:12,2:14:89.23:89,0,343	0/1:8,0:7:15.60:16,0,244	0/0:28,0:27:21.16:0,21,964	0/1:15,2:17:99:130,0,491	0/0:25,0:25:66.23:0,66,1132	0/0:24,0:24:72.22:0,72,1212	0/0:8,0:8:21.07:0,21,359
chr10	73487031	.	GA	G	2841.62	PASS	AB=0.892;AC=22;AF=0.393;AN=56;BaseQRankSum=9.292;DP=448;FS=5.743;HRun=10;HaplotypeScore=55.1415;InbreedingCoeff=0.8097;MQ=81.82;MQ0=0;MQRankSum=-1.853;QD=16.15;ReadPosRankSum=3.320;VQSLOD=4.0400;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:12:20.84:61,21,0	0/0:8,0:8:15.04:0,15,166	0/0:31,1:19:15.32:0,15,178	0/0:24,0:18:22.16:0,22,169	0/0:20,0:20:54.60:0,55,588	0/0:13,0:13:36.10:0,36,398	0/0:8,0:8:21.06:0,21,232	0/0:27,0:26:69.18:0,69,757	0/0:10,1:11:4.03:0,4,272	1/1:3,16:19:44.94:383,45,0	1/1:2,18:20:53.97:467,54,0	1/1:1,16:17:47.99:417,48,0	1/1:3,15:18:38.03:318,38,0	0/0:9,0:9:18.05:0,18,199	0/1:9,1:10:8.01:8,0,148	0/0:17,2:19:25.09:0,25,505	0/0:22,0:22:57.14:0,57,623	1/1:1,18:19:47.99:417,48,0	0/0:18,1:21:33.02:0,33,541	0/0:17,1:18:17.10:0,17,406	0/0:6,0:6:15.01:0,15,153	1/1:2,3:5:9:78,9,0	1/1:1,13:14:3.28:253,3,0	1/1:1,6:7:17.99:156,18,0	1/1:3,25:28:53.43:489,53,0	0/0:16,1:18:19.52:0,20,425	0/0:16,0:15:45.12:0,45,497	0/1:4,1:7:5.27:5,0,142
chr10	73487116	.	GT	G	151.52	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.716;DP=436;FS=3.254;HRun=7;HaplotypeScore=42.9422;InbreedingCoeff=0.8150;MQ=65.03;MQ0=2;MQRankSum=-2.632;QD=15.15;ReadPosRankSum=-1.380;VQSLOD=2.7911;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:10:24.05:245,24,0	0/0:3,0:3:9.03:0,9,113	0/0:12,0:9:17.54:0,18,177	0/0:8,0:6:15.02:0,15,164	0/0:26,0:26:72.23:0,72,906	0/0:16,0:16:45.14:0,45,565	0/0:15,0:15:45.14:0,45,565	0/0:34,0:34:87.25:0,87,1060	0/0:14,0:14:42.12:0,42,515	0/0:11,0:11:27.09:0,27,339	0/0:20,0:20:57.18:0,57,716	0/0:9,0:9:27.09:0,27,340	0/0:21,0:21:63.20:0,63,792	0/0:14,0:14:39.11:0,39,471	0/0:13,0:13:36.12:0,36,453	0/0:17,0:17:51.15:0,51,629	0/0:19,0:19:54.15:0,54,662	0/0:19,0:19:42.13:0,42,525	0/0:22,0:22:51.62:0,52,629	0/0:22,0:22:66.20:0,66,809	0/0:13,0:13:39.11:0,39,476	0/0:5,0:5:15.05:0,15,189	0/0:13,0:13:39.11:0,39,478	0/0:2,0:2:6.02:0,6,75	0/0:21,0:21:48.15:0,48,604	0/0:26,0:26:69.18:0,69,821	0/0:25,0:24:66.21:0,66,827	0/0:6,0:6:15.03:0,15,175
chr10	73488078	.	T	TA	4439.49	PASS	AB=0.909;AC=21;AF=0.375;AN=56;BaseQRankSum=-5.599;DP=583;FS=3.133;HRun=11;HaplotypeScore=64.3145;InbreedingCoeff=0.8863;MQ=73.74;MQ0=0;MQRankSum=0.115;QD=17.34;ReadPosRankSum=2.752;VQSLOD=6.0271;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,31:38:60.93:799,61,0	0/0:12,1:13:5.37:0,5,219	0/0:12,0:12:15.95:0,16,119	0/0:10,0:12:15.72:0,16,112	0/0:28,0:30:79.54:0,80,595	0/0:18,0:18:41.83:0,42,325	0/0:15,0:15:35.77:0,36,270	0/0:23,1:24:35.77:0,36,275	0/0:22,0:22:56.75:0,57,438	1/1:9,22:31:66.07:647,66,0	1/1:6,24:31:45.63:603,46,0	1/1:5,6:12:17.87:167,18,0	1/1:5,16:21:36.20:386,36,0	0/0:18,0:18:47.42:0,47,358	0/0:17,0:17:44.83:0,45,348	0/0:13,1:14:5.39:0,5,222	0/0:24,0:24:62.60:0,63,478	1/1:1,18:19:36.07:365,36,0	0/1:18,2:20:13.13:13,0,270	0/0:25,0:26:61.75:0,62,466	0/0:7,0:7:14.91:0,15,114	1/1:6,15:21:44.55:403,45,0	1/1:4,15:19:30.53:306,31,0	1/1:6,10:17:31.39:294,31,0	1/1:6,21:27:44.88:457,45,0	0/0:28,1:29:38.24:0,38,478	0/0:32,0:32:35.70:0,36,495	0/0:13,0:13:32.80:0,33,249
chr10	73490240	.	GA	G	2406.07	PASS	AB=0.882;AC=19;AF=0.339;AN=56;BaseQRankSum=8.996;DP=482;FS=1.823;HRun=11;HaplotypeScore=51.8210;InbreedingCoeff=0.8899;MQ=58.29;MQ0=17;MQRankSum=-0.166;QD=15.42;ReadPosRankSum=1.187;VQSLOD=4.1919;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:72.13:0,72,749	0/0:10,0:12:32.88:0,33,324	0/0:19,1:9:7.49:0,7,110	0/0:14,0:5:15.04:0,15,160	0/0:18,0:19:54:0,54,558	0/0:15,0:17:41.61:0,42,394	0/0:12,1:13:8.27:0,8,256	0/0:26,1:27:35.49:0,35,573	0/0:8,0:8:18.05:0,18,192	1/1:7,12:17:25.94:304,26,0	1/1:0,13:13:35.96:296,36,0	1/1:4,18:22:47.93:394,48,0	1/1:1,20:21:53.94:443,54,0	0/0:9,0:9:18.05:0,18,192	0/1:13,2:15:4.18:4,0,371	0/0:12,0:12:33.08:0,33,352	0/0:27,1:30:44.05:0,44,627	1/1:5,16:20:38.51:320,39,0	0/0:24,2:27:18.57:0,19,629	0/0:19,0:19:57.13:0,57,600	0/0:6,0:6:15.02:0,15,151	1/1:2,10:12:29.96:246,30,0	1/1:1,14:15:35.96:296,36,0	1/1:3,5:7:6.75:91,7,0	1/1:1,9:10:26.88:222,27,0	0/0:28,0:29:78.01:0,78,805	0/0:18,0:18:48.12:0,48,512	0/0:14,0:11:9.98:0,10,210
chr10	73490968	.	CTTTT	C	1092.13	PASS	AB=0.560;AC=11;AF=0.204;AN=54;BaseQRankSum=5.902;DP=541;FS=5.715;HRun=12;HaplotypeScore=80.6551;InbreedingCoeff=0.8004;MQ=68.84;MQ0=18;MQRankSum=-2.427;QD=11.38;ReadPosRankSum=6.776;VQSLOD=-0.7140;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:13:23.99:0,24,348	./.	0/0:63,0:21:25.93:0,26,531	0/0:66,0:17:36.91:0,37,365	0/0:31,0:32:79.15:0,79,1590	0/0:16,0:17:33.11:0,33,700	0/0:18,0:21:57.14:0,57,1150	0/0:20,0:20:42.14:0,42,837	0/0:18,0:18:42.13:0,42,814	0/1:3,0:14:20.67:21,0,84	0/0:2,0:11:18.89:0,19,124	1/1:3,21:24:20.99:308,21,0	1/1:1,13:14:18.06:272,18,0	0/0:14,0:14:39.13:0,39,797	0/0:22,0:22:63.09:0,63,1331	0/0:15,0:17:51.17:0,51,991	0/0:11,0:11:24.04:0,24,445	0/0:6,0:19:23.96:0,24,289	0/0:13,0:13:27.09:0,27,542	0/0:15,0:16:45.15:0,45,952	0/0:18,0:19:43.03:0,43,948	1/1:1,13:14:21:308,21,0	1/1:3,12:15:5.75:90,6,0	1/1:5,10:15:18.03:262,18,0	0/0:4,0:10:6.97:0,7,74	0/0:18,0:18:45.14:0,45,899	0/0:16,0:15:48.16:0,48,1060	0/0:6,0:6:3.01:0,3,74
chr10	73491745	.	CTA	C	777.77	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.472;DP=556;FS=3.148;HRun=0;HaplotypeScore=81.1971;InbreedingCoeff=0.9893;MQ=76.87;MQ0=0;MQRankSum=-3.509;QD=35.35;ReadPosRankSum=2.804;VQSLOD=6.1839;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:57.19:873,57,0	0/0:7,0:7:18.06:0,18,348	0/0:19,0:19:51.17:0,51,905	0/0:14,0:14:42.11:0,42,683	0/0:27,0:27:78.27:0,78,1479	0/0:21,0:21:63.21:0,63,1176	0/0:15,0:15:45.15:0,45,851	0/0:37,0:37:99:0,111,2049	0/0:20,0:20:60.18:0,60,1092	0/0:35,0:35:99:0,105,2019	0/0:21,0:21:63.22:0,63,1174	0/0:14,0:14:39.13:0,39,726	0/0:22,0:22:66.23:0,66,1275	0/0:18,0:18:54.19:0,54,1043	0/0:10,0:10:30.10:0,30,579	0/0:24,0:24:72.25:0,72,1368	0/0:23,0:23:69.24:0,69,1304	0/0:14,0:14:39.12:0,39,685	0/0:15,0:15:42.14:0,42,767	0/0:24,0:24:69.24:0,69,1326	0/0:8,0:8:24.08:0,24,425	0/0:25,0:25:75.22:0,75,1346	0/0:16,0:16:48.16:0,48,905	0/0:16,0:16:45.15:0,45,869	0/0:19,0:19:57.20:0,57,1095	0/0:27,0:27:81.28:0,81,1548	0/0:28,0:27:84.27:0,84,1578	0/0:15,0:15:45.15:0,45,867
chr10	73493361	.	TCG	T	549.04	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=6.030;DP=452;FS=1.386;HRun=0;HaplotypeScore=90.5866;InbreedingCoeff=0.5883;MQ=60.20;MQ0=6;MQRankSum=2.781;QD=18.30;ReadPosRankSum=-1.851;VQSLOD=3.5049;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:26.80:0,27,200	0/0:8,0:8:20.32:0,20,196	0/0:21,0:12:2.05:0,2,90	0/0:17,0:8:4.02:0,4,83	0/0:16,0:15:33.62:0,34,334	0/0:11,0:11:17.60:0,18,260	0/0:24,0:24:54.11:0,54,490	0/0:13,0:13:32.51:0,33,237	0/0:12,0:12:32.88:0,33,329	1/1:2,21:23:54.51:520,55,0	./.	0/0:17,0:18:7.57:0,8,84	0/0:3,0:11:8.99:0,9,77	0/0:14,0:14:30.23:0,30,284	0/0:18,0:18:45.46:0,45,400	0/0:15,0:15:40.49:0,40,338	0/0:27,0:27:65.66:0,66,727	0/0:9,0:8:11.83:0,12,93	0/0:14,0:14:37.66:0,38,290	0/0:10,0:10:23.84:0,24,206	0/0:40,0:39:84.39:0,84,705	0/0:1,0:10:2.04:0,2,6	0/0:5,0:16:0.01:0,0,0	0/0:23,0:23:37.72:0,38,321	1/1:7,0:7:4.85:137,5,0	0/0:20,0:19:4.88:0,5,457	0/0:14,0:14:41.64:0,42,397	0/0:1,0:1:2.96:0,3,19
chr10	73493363	.	G	GCGCGCA	973	PASS	AB=1.000;AC=6;AF=0.120;AN=50;BaseQRankSum=4.261;DP=480;FS=25.093;HRun=0;HaplotypeScore=133.9452;InbreedingCoeff=0.5282;MQ=57.71;MQ0=7;MQRankSum=-1.755;QD=13.15;ReadPosRankSum=-2.263;VQSLOD=1.1282;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:28:10.85:0,11,129	0/0:7,0:9:18.05:0,18,296	0/0:19,0:10:27.41:0,27,349	0/0:16,0:7:1.98:0,2,94	0/0:16,0:15:39.12:0,39,662	0/0:11,0:14:32.06:0,32,455	0/0:22,0:25:60.04:0,60,1002	0/0:14,0:14:31.37:0,31,510	0/0:11,0:11:26.76:0,27,443	0/0:24,0:24:31.65:0,32,590	./.	1/1:4,17:25:7.85:182,8,0	0/1:13,0:12:13.42:202,0,13	0/0:18,0:17:36.58:0,37,588	0/0:19,0:19:45.15:0,45,753	0/0:14,0:16:45.40:0,45,686	0/0:28,0:30:78.11:0,78,1224	0/1:12,0:11:78.09:78,0,97	0/0:14,0:14:37.64:0,38,523	0/0:10,0:10:23.87:0,24,383	0/0:41,0:40:83.15:0,83,1349	./.	0/0:17,0:17:0.07:0,0,1	1/1:23,1:24:41.80:637,42,0	0/0:7,0:7:21.07:0,21,321	0/0:21,0:20:42.03:0,42,981	0/0:13,0:13:39.10:0,39,647	./.
chr10	73494640	.	GAAC	G	1416.37	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.972;DP=781;FS=6.271;HRun=0;HaplotypeScore=111.7755;InbreedingCoeff=0.9974;MQ=73.26;MQ0=2;MQRankSum=-3.541;QD=32.19;ReadPosRankSum=-0.136;VQSLOD=4.0354;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,35:43:99:1511,105,0	0/0:12,0:12:33.11:0,33,719	0/0:28,0:26:69.05:0,69,1172	0/0:31,0:29:26.33:0,26,1148	0/0:24,0:24:69.22:0,69,1493	0/0:18,0:18:48.16:0,48,1071	0/0:27,0:26:72.21:0,72,1521	0/0:31,0:30:87.29:0,87,1894	0/0:29,0:29:84.29:0,84,1835	0/0:34,0:34:96.32:0,96,2083	0/0:19,0:19:51.13:0,51,1089	0/0:47,0:47:99:0,132,2800	0/0:28,0:28:84.28:0,84,1818	0/0:22,0:22:63.22:0,63,1386	0/0:32,0:32:81.28:0,81,1806	0/0:32,0:32:90.28:0,90,1925	0/0:35,0:35:99:0,105,2298	0/0:33,0:33:93.30:0,93,1946	0/0:30,0:27:72.25:0,72,1593	0/0:18,0:18:51.18:0,51,1135	0/0:57,0:57:99:0,169,3693	0/0:18,0:18:54.17:0,54,1121	0/0:16,0:16:48.16:0,48,1052	0/0:35,0:35:99:0,105,2298	0/0:10,0:10:27.09:0,27,599	0/0:28,0:28:78.26:0,78,1680	0/0:29,0:29:84.25:0,84,1761	0/0:13,0:13:39.13:0,39,851
chr10	73494714	.	A	AC	1210.78	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.029;DP=721;FS=0.000;HRun=0;HaplotypeScore=69.6302;InbreedingCoeff=0.9948;MQ=60.66;MQ0=4;MQRankSum=0.401;QD=35.61;ReadPosRankSum=-0.379;VQSLOD=3.0862;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:33:84.28:1306,84,0	0/0:14,0:14:42.12:0,42,556	0/0:22,0:15:44.98:0,45,547	0/0:32,0:26:72.15:0,72,930	0/0:19,0:18:51.17:0,51,708	0/0:10,0:10:30.08:0,30,394	0/0:29,0:29:87.29:0,87,1215	0/0:20,0:19:57.19:0,57,794	0/0:19,0:19:51.17:0,51,713	0/0:27,0:26:75.24:0,75,1035	0/0:20,0:20:60.20:0,60,835	0/0:36,0:36:99:0,108,1475	0/0:27,0:27:81.24:0,81,1105	0/0:23,0:23:69.23:0,69,950	0/0:18,0:18:54.18:0,54,755	0/0:27,0:27:81.27:0,81,1131	0/0:30,0:30:90.30:0,90,1251	0/0:42,0:41:99:0,123,1688	0/0:15,0:14:39.13:0,39,541	0/0:10,0:10:30.10:0,30,416	0/0:76,0:76:99:0,226,3117	0/0:26,0:26:78.26:0,78,1087	0/0:15,0:15:39.13:0,39,544	0/0:43,0:43:99:0,126,1704	0/0:18,0:18:54.18:0,54,755	0/0:30,0:30:87.29:0,87,1216	0/0:32,0:32:90.30:0,90,1235	0/0:7,0:7:21.07:0,21,293
chr10	73494963	.	T	TA	974.95	PASS	AB=0.835;AC=11;AF=0.196;AN=56;BaseQRankSum=-4.390;DP=336;FS=0.657;HRun=13;HaplotypeScore=46.9787;InbreedingCoeff=0.3866;MQ=67.96;MQ0=0;MQRankSum=0.004;QD=8.63;ReadPosRankSum=1.147;VQSLOD=2.1907;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:42:381,42,0	0/0:8,0:8:20.80:0,21,142	0/1:11,0:8:4.76:5,0,19	0/1:13,0:10:15.72:16,0,29	0/0:10,0:11:25.83:0,26,170	0/0:7,0:7:14.65:0,15,92	0/0:6,0:6:17.82:0,18,120	0/0:18,1:20:12.84:0,13,225	0/0:7,0:7:6.77:0,7,43	1/1:2,3:5:6.01:56,6,0	0/1:7,8:15:30.46:167,0,30	0/0:2,0:9:12.22:0,12,35	0/0:1,0:8:12.22:0,12,35	0/0:13,0:13:26.70:0,27,185	0/0:11,0:11:17.76:0,18,120	0/1:12,0:12:3.49:3,0,101	0/0:20,0:20:44.21:0,44,296	0/1:5,11:16:26.07:190,0,26	0/0:6,0:5:5.91:0,6,41	0/0:8,0:9:10.85:0,11,66	0/0:10,0:10:17.76:0,18,117	0/0:2,0:9:14.24:0,14,41	0/0:4,0:14:14.21:0,14,41	0/0:0,0:15:18.15:0,18,53	1/1:3,15:18:18.45:310,18,0	0/0:19,0:19:21.88:0,22,160	0/0:12,0:12:20.69:0,21,143	0/0:9,0:9:26.78:0,27,185
chr10	73497669	.	G	GTT	3746.07	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-8.722;DP=626;FS=9.609;HRun=8;HaplotypeScore=72.1457;InbreedingCoeff=0.9988;MQ=66.56;MQ0=3;MQRankSum=1.434;QD=33.45;ReadPosRankSum=0.712;VQSLOD=2.9147;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.18:0,69,769	0/0:8,0:8:21.02:0,21,214	0/0:32,0:20:38.64:0,39,426	0/0:29,0:18:30.90:0,31,313	0/0:29,0:29:84.14:0,84,897	0/0:29,0:29:84.22:0,84,936	0/0:15,0:15:42.11:0,42,468	0/0:28,0:28:72.18:0,72,801	0/0:22,0:22:60.16:0,60,668	0/0:19,0:19:51.13:0,51,569	0/0:37,0:37:99:0,105,1143	1/1:3,17:20:33.11:524,33,0	1/1:4,16:20:42.14:664,42,0	0/0:20,0:20:57.14:0,57,626	0/0:23,0:23:65.89:0,66,736	0/0:17,0:17:48.12:0,48,535	0/0:20,0:20:45.09:0,45,491	0/0:15,0:14:42.11:0,42,466	0/0:23,0:23:57.14:0,57,635	0/0:26,0:26:54.76:0,55,703	0/0:16,0:16:48.10:0,48,515	1/1:1,23:24:63.16:971,63,0	1/1:2,23:27:65.14:920,65,0	1/1:2,19:20:42.14:667,42,0	0/0:18,0:18:51.12:0,51,558	0/0:22,0:22:66.18:0,66,736	0/0:26,0:25:75.17:0,75,826	0/0:15,0:15:39.10:0,39,434
chr10	73498144	.	AAC	A	240.45	PASS	AB=0.957;AC=17;AF=0.405;AN=42;BaseQRankSum=2.750;DP=446;FS=3.099;HRun=0;HaplotypeScore=61.9693;InbreedingCoeff=-0.2244;MQ=56.46;MQ0=9;MQRankSum=2.537;QD=1.02;ReadPosRankSum=0.846;VQSLOD=1.5054;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:22:16.55:17,0,148	0/0:10,0:8:3.01:0,3,44	./.	./.	1/1:14,1:18:11.67:80,12,0	0/1:26,0:26:13.73:14,0,180	0/1:16,0:16:10.20:10,0,71	./.	0/1:14,2:16:16.77:17,0,138	./.	0/0:21,0:18:6:0,6,67	0/1:15,1:16:13.75:14,0,198	1/1:7,2:9:6.01:64,6,0	0/0:14,0:14:9.03:0,9,128	./.	0/1:14,0:13:20.15:20,0,94	1/1:15,0:16:2.84:14,3,0	0/1:12,0:14:2.86:8,0,3	./.	0/0:14,0:14:5.85:0,6,84	0/1:26,0:27:42.19:42,0,75	0/0:12,0:12:3:0,3,25	0/1:10,0:10:25.53:26,0,27	0/0:18,0:17:3.01:0,3,38	./.	0/1:11,2:13:22.78:23,0,79	0/1:15,0:15:25.78:26,0,38	0/0:7,0:7:9.02:0,9,110
chr10	73498479	.	G	GGTT	475.55	PASS	AB=0.567;AC=1;AF=0.019;AN=52;BaseQRankSum=-1.993;DP=405;FS=1.315;HRun=0;HaplotypeScore=61.7678;InbreedingCoeff=-0.0027;MQ=44.44;MQ0=14;MQRankSum=-1.363;QD=27.97;ReadPosRankSum=0.107;VQSLOD=3.6332;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:57.18:0,57,924	0/0:11,0:9:27.07:0,27,422	./.	./.	0/0:17,0:16:24.08:0,24,399	0/0:12,0:12:33.11:0,33,549	0/0:21,0:19:54.18:0,54,898	0/0:20,0:20:54.15:0,54,869	0/0:16,0:16:45.15:0,45,749	0/0:10,0:9:24.08:0,24,400	0/0:8,0:8:21.07:0,21,350	0/0:12,0:12:30.10:0,30,499	0/0:11,0:11:33.10:0,33,524	0/0:22,0:22:57.19:0,57,949	0/0:17,0:17:42.14:0,42,699	0/0:16,0:16:48.16:0,48,799	0/0:19,0:16:42.09:0,42,644	0/1:4,13:14:19.87:550,0,20	0/0:15,0:11:30.10:0,30,500	0/0:13,0:12:33.11:0,33,549	0/0:20,0:19:42.14:0,42,682	0/0:10,0:9:21.07:0,21,349	0/0:15,0:14:30.09:0,30,472	0/0:20,0:18:42.14:0,42,696	0/0:9,0:9:27.09:0,27,449	0/0:20,0:18:54.18:0,54,899	0/0:23,0:23:56.73:0,57,924	0/0:5,0:4:12.04:0,12,200
chr10	73499669	.	TA	T	1291.68	PASS	AB=0.667;AC=21;AF=0.375;AN=56;BaseQRankSum=7.808;DP=390;FS=1.537;HRun=13;HaplotypeScore=47.1402;InbreedingCoeff=0.8242;MQ=70.19;MQ0=3;MQRankSum=1.999;QD=9.36;ReadPosRankSum=2.852;VQSLOD=2.5299;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:19:40.81:290,41,0	0/0:4,0:4:9.01:0,9,88	0/0:19,0:12:23.30:0,23,154	0/0:14,0:9:14.81:0,15,121	0/0:17,1:18:23.16:0,23,387	0/0:20,1:21:30.07:0,30,442	0/0:8,0:8:15:0,15,138	0/0:20,0:19:45.02:0,45,419	0/0:12,1:13:17.15:0,17,324	1/1:6,20:26:50.64:372,51,0	1/1:5,10:15:26.83:197,27,0	1/1:3,0:13:14.25:41,14,0	1/1:3,0:13:20.23:59,20,0	0/0:7,0:7:21.03:0,21,204	0/0:15,0:15:20.40:0,20,253	0/0:5,0:5:9.01:0,9,88	0/0:23,0:23:29.50:0,30,445	1/1:1,13:15:31.86:225,32,0	0/0:18,1:19:15.68:0,16,294	0/0:11,0:11:20.96:0,21,189	0/1:2,2:4:12.90:13,0,49	1/1:1,0:2:2.03:6,2,0	1/1:4,0:12:16.28:47,16,0	1/1:1,0:4:2.04:6,2,0	1/1:2,12:14:32.81:241,33,0	0/0:20,2:22:7.25:0,7,386	0/0:22,0:22:45.27:0,45,539	0/0:11,0:11:12.02:0,12,117
chr10	73501206	.	C	CA	1413.33	PASS	AB=0.926;AC=8;AF=0.143;AN=56;BaseQRankSum=6.721;DP=583;FS=5.401;HRun=9;HaplotypeScore=82.1766;InbreedingCoeff=0.7030;MQ=76.89;MQ0=0;MQRankSum=0.094;QD=12.51;ReadPosRankSum=-2.196;VQSLOD=3.0195;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:31,2:33:49.98:50,0,283	0/0:11,0:11:32.99:0,33,286	0/0:25,0:22:39.77:0,40,297	0/0:29,0:26:19.24:0,19,270	0/0:26,0:26:59.49:0,59,543	0/0:24,0:25:74.02:0,74,631	0/0:15,0:15:12.38:0,12,262	0/0:18,0:18:38.98:0,39,338	0/0:22,0:23:62:0,62,522	1/1:8,19:27:47.07:575,47,0	1/1:6,14:20:31.34:409,31,0	0/0:16,1:17:7.39:0,7,168	0/1:9,1:10:6.37:6,0,110	0/0:9,0:11:31.07:0,31,246	0/0:21,0:22:62.01:0,62,523	0/0:13,0:13:38.98:0,39,334	0/0:24,0:24:45.70:0,46,540	0/0:28,0:28:55.88:0,56,344	0/0:14,0:16:40.06:0,40,322	0/0:24,0:24:21.80:0,22,382	0/0:16,0:16:38.99:0,39,339	0/0:16,0:16:39.32:0,39,233	0/0:15,0:15:26.56:0,27,146	0/0:21,0:21:48.87:0,49,268	1/1:3,18:23:49.73:524,50,0	0/0:26,0:26:68.95:0,69,592	0/0:22,1:24:28.83:0,29,467	0/0:23,0:23:56.98:0,57,493
chr10	73502635	.	G	GA	1862.14	PASS	AB=0.854;AC=21;AF=0.375;AN=56;BaseQRankSum=1.096;DP=497;FS=1.458;HRun=12;HaplotypeScore=73.9614;InbreedingCoeff=0.4734;MQ=62.14;MQ0=13;MQRankSum=-2.702;QD=7.54;ReadPosRankSum=-0.019;VQSLOD=2.4607;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,1:30:12.21:41,0,12	0/0:9,0:8:13.92:0,14,92	0/1:17,0:6:3.29:3,0,18	0/0:18,0:10:6:0,6,42	0/0:10,0:11:17.72:0,18,129	0/0:18,1:20:20.56:0,21,305	0/0:24,1:25:25.76:0,26,345	0/1:8,2:10:11.24:11,0,92	0/1:16,0:15:4.74:5,0,118	1/1:7,11:17:30.02:281,30,0	0/1:3,5:9:1.20:108,0,1	1/1:4,3:11:7.97:108,8,0	1/1:4,10:15:11.92:104,12,0	0/0:21,0:21:38.75:0,39,283	0/0:10,1:14:3.83:0,4,164	0/0:13,0:13:26.75:0,27,193	0/0:36,0:36:71.38:0,71,516	1/1:27,0:27:52.06:284,52,0	0/0:22,1:22:16.36:0,16,273	0/0:7,0:7:8.90:0,9,66	0/0:21,0:21:26.44:0,26,323	0/1:7,3:15:37.03:134,0,37	1/1:6,10:17:7.96:217,8,0	1/1:1,29:31:65.89:615,66,0	1/1:3,6:11:14.70:116,15,0	0/1:14,2:17:25.19:25,0,156	0/0:16,0:17:40.72:0,41,288	0/0:11,0:11:23.61:0,24,166
chr10	73502644	.	A	AC	669.89	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=3.388;DP=523;FS=8.192;HRun=0;HaplotypeScore=73.4820;InbreedingCoeff=0.3868;MQ=64.54;MQ0=6;MQRankSum=-1.615;QD=8.48;ReadPosRankSum=6.383;VQSLOD=2.4508;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:80.30:0,80,743	0/0:9,0:8:23.98:0,24,258	0/0:23,0:9:20.46:0,20,154	0/0:19,0:11:17:0,17,166	0/0:13,0:13:27.01:0,27,319	0/0:22,0:22:58.79:0,59,746	0/0:21,0:21:58.19:0,58,774	0/0:13,0:13:26.39:0,26,363	0/0:15,0:14:31.71:0,32,372	0/0:18,0:18:11.18:0,11,165	0/0:11,0:11:18.49:0,18,162	0/0:15,0:15:9.66:0,10,165	0/0:12,0:12:2.44:0,2,24	0/0:15,0:15:42.13:0,42,566	0/0:15,0:15:35.25:0,35,459	0/0:12,0:12:36.10:0,36,453	0/0:37,0:37:99:0,102,1242	1/1:0,31:30:54.18:716,54,0	0/0:25,0:24:65.37:0,65,780	0/0:8,0:8:23.91:0,24,240	0/0:22,0:22:61.41:0,61,772	0/0:16,0:16:13.37:0,13,235	0/1:16,0:16:10.76:11,0,80	0/1:32,0:32:29.69:56,0,30	0/0:12,0:12:14.72:0,15,121	0/0:23,0:23:37.66:0,38,558	0/0:19,0:19:54.08:0,54,651	0/0:12,0:12:36.08:0,36,431
chr10	73502646	.	AAC	A	779.02	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=4.949;DP=533;FS=4.191;HRun=0;HaplotypeScore=79.2862;InbreedingCoeff=0.2831;MQ=64.30;MQ0=6;MQRankSum=-4.834;QD=8.56;ReadPosRankSum=-3.480;VQSLOD=2.5821;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:21,16:37:86.30:862,86,0	0/0:9,0:8:23.81:0,24,290	0/1:25,0:9:6.66:7,0,112	0/0:19,0:11:21.03:0,21,180	0/0:14,0:14:36.04:0,36,444	0/0:22,0:22:63.01:0,63,881	0/0:22,0:22:66.03:0,66,817	0/1:16,0:16:16.39:16,0,358	0/0:15,0:14:35.89:0,36,465	0/0:18,0:18:25.28:0,25,444	0/0:11,0:11:4.46:0,4,292	0/0:14,0:14:26.44:0,26,231	0/1:13,0:13:9.79:10,0,95	0/0:15,0:15:42.05:0,42,599	0/0:15,0:15:34.28:0,34,472	0/0:12,0:12:33.03:0,33,472	0/0:37,0:37:99:0,102,1322	0/0:31,0:30:56.06:0,56,681	0/0:27,0:26:50.19:0,50,845	0/0:8,0:8:21.01:0,21,252	0/0:22,0:22:66.15:0,66,879	0/0:17,0:17:43.07:0,43,369	0/0:15,0:15:2.10:0,2,248	0/0:32,0:32:8.20:0,8,435	0/0:11,1:12:17.38:0,17,182	0/0:24,0:24:9.37:0,9,538	0/0:19,0:19:30.17:0,30,658	0/0:12,0:12:36.10:0,36,513
chr10	73502943	.	T	TAA	9159.84	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-11.569;DP=539;FS=5.383;HRun=0;HaplotypeScore=60.0660;InbreedingCoeff=0.9977;MQ=83.03;MQ0=0;MQRankSum=-1.199;QD=51.75;ReadPosRankSum=2.415;VQSLOD=5.8295;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:39.13:791,39,0	0/0:7,0:7:21.06:0,21,318	0/0:15,0:15:42.60:0,43,577	0/0:18,0:18:36.49:0,36,517	0/0:31,0:31:87.30:0,87,1413	0/0:20,0:20:60.20:0,60,978	0/0:20,0:20:60.19:0,60,952	0/0:34,0:34:99:0,99,1519	0/0:15,0:15:45.14:0,45,707	1/1:0,34:34:99:1898,99,0	1/1:0,15:15:36.04:686,36,0	1/1:0,15:15:45.09:871,45,0	1/1:0,6:6:18.06:366,18,0	0/0:21,0:21:57.19:0,57,929	0/0:20,0:20:60.20:0,60,976	0/0:22,0:22:66.20:0,66,1028	0/0:34,0:34:99:0,102,1581	1/1:0,20:21:54.19:1097,54,0	0/0:11,0:11:33.09:0,33,491	0/0:10,0:10:27.08:0,27,415	0/0:18,0:18:51.13:0,51,758	1/1:2,18:20:54.14:1055,54,0	1/1:0,22:22:60.16:1177,60,0	1/1:0,13:13:33.11:670,33,0	1/1:0,13:15:27.09:548,27,0	0/0:28,0:28:81.27:0,81,1300	0/0:26,0:26:78.20:0,78,1154	0/0:12,0:12:36.11:0,36,562
chr10	73504113	.	T	TA	1711.31	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-5.070;DP=312;FS=4.303;HRun=9;HaplotypeScore=35.4568;InbreedingCoeff=0.8114;MQ=70.51;MQ0=2;MQRankSum=-1.525;QD=16.14;ReadPosRankSum=1.994;VQSLOD=3.1955;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,1:15:22.55:110,23,0	0/0:6,0:6:18:0,18,156	0/1:17,0:9:14.03:14,0,63	0/0:12,0:8:8.58:0,9,69	0/0:9,0:9:26.99:0,27,234	0/0:16,0:16:47.99:0,48,417	0/0:6,0:6:15:0,15,130	0/0:35,0:35:83.94:0,84,722	0/0:6,0:6:11.14:0,11,103	1/1:1,13:14:42.11:460,42,0	1/1:0,3:3:6.02:66,6,0	1/1:1,6:7:9.02:100,9,0	1/1:1,6:7:9.02:100,9,0	0/0:4,0:4:11.95:0,12,94	0/0:4,0:4:12:0,12,104	0/0:10,0:10:26.98:0,27,231	0/0:27,0:27:59.56:0,60,520	1/1:5,15:20:28.37:386,28,0	0/0:22,0:22:47.98:0,48,416	0/0:10,0:10:26.98:0,27,230	0/0:3,0:3:5.03:0,5,32	1/1:0,3:3:5.93:50,6,0	1/1:0,4:4:12.03:133,12,0	1/1:0,2:2:6.02:66,6,0	1/1:0,13:13:39.11:431,39,0	0/0:13,0:13:32.98:0,33,286	0/0:12,0:12:29.98:0,30,260	0/0:11,0:11:32.99:0,33,286
chr10	73505426	.	G	GA	1511.25	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.474;DP=449;FS=9.887;HRun=1;HaplotypeScore=89.9808;InbreedingCoeff=0.9826;MQ=63.34;MQ0=7;MQRankSum=-10.140;QD=20.99;ReadPosRankSum=-1.948;VQSLOD=2.4087;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,7:18:38.55:368,39,0	0/0:8,0:7:21.05:0,21,258	0/0:21,0:14:32.81:0,33,400	0/0:21,0:15:42.13:0,42,532	0/0:20,0:20:57.14:0,57,720	0/0:18,0:18:54.16:0,54,687	0/0:15,0:14:42.12:0,42,519	0/0:18,0:18:54.18:0,54,701	0/0:17,0:17:48.16:0,48,623	0/0:19,0:19:57.16:0,57,695	0/0:17,0:17:51.13:0,51,632	1/1:7,0:7:20.84:217,21,0	1/1:7,0:7:20.92:208,21,0	0/0:17,0:17:45.15:0,45,584	0/0:8,0:8:18.06:0,18,234	0/0:17,0:17:51.13:0,51,644	0/0:17,0:17:48.14:0,48,608	1/1:7,0:7:8.95:63,9,0	0/0:27,0:27:72.20:0,72,894	0/0:14,0:14:32.68:0,33,385	0/0:21,0:21:60.18:0,60,764	1/1:12,0:11:33.07:375,33,0	1/1:8,0:7:18.03:198,18,0	1/1:13,0:12:23.92:278,24,0	0/0:20,0:19:56.91:0,57,722	0/0:31,0:30:87.27:0,87,1106	0/0:23,0:23:69.22:0,69,895	0/0:8,0:7:21.07:0,21,273
chr10	73507378	.	AC	A	1127.19	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.475;DP=607;FS=3.316;HRun=2;HaplotypeScore=75.5922;InbreedingCoeff=0.9957;MQ=94.16;MQ0=0;MQRankSum=-5.394;QD=32.21;ReadPosRankSum=0.245;VQSLOD=3.3779;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:75.36:1222,75,0	0/0:7,0:7:21.07:0,21,315	0/0:25,0:25:75.23:0,75,1090	0/0:31,0:31:93.31:0,93,1384	0/0:15,0:15:42.14:0,42,628	0/0:23,0:22:69.21:0,69,993	0/0:20,0:20:60.19:0,60,879	0/0:21,0:21:63.20:0,63,926	0/0:22,0:22:63.21:0,63,942	0/0:29,0:29:87.28:0,87,1275	0/0:23,0:22:69.23:0,69,1012	0/0:20,0:20:60.19:0,60,877	0/0:17,0:17:51.17:0,51,764	0/0:23,0:23:69.22:0,69,1012	0/0:27,0:27:81.26:0,81,1176	0/0:29,0:29:87.29:0,87,1304	0/0:20,0:20:60.20:0,60,899	0/0:13,0:13:39.09:0,39,559	0/0:15,0:15:45.14:0,45,656	0/0:27,0:27:81.27:0,81,1213	0/0:20,0:20:60.16:0,60,839	0/0:19,0:19:57.18:0,57,833	0/0:30,0:30:84.27:0,84,1237	0/0:20,0:20:57.19:0,57,854	0/0:16,0:16:48.15:0,48,698	0/0:24,0:24:72.24:0,72,1061	0/0:24,0:24:72.22:0,72,1056	0/0:12,0:12:36.12:0,36,539
chr10	73507836	.	C	CATATAT	358.88	PASS	AC=6;AF=0.120;AN=50;BaseQRankSum=-0.236;DP=284;FS=0.000;HRun=0;HaplotypeScore=60.7048;InbreedingCoeff=0.6190;MQ=77.54;MQ0=0;MQRankSum=-0.333;QD=12.82;ReadPosRankSum=-2.538;VQSLOD=1.1864;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:1.25:3,1,0	0/0:2,0:2:6.02:0,6,111	./.	./.	0/0:19,0:19:42.06:0,42,714	0/0:18,0:18:20.10:0,20,666	0/0:7,0:7:9.03:0,9,177	0/0:38,0:38:85.59:0,86,1559	0/0:12,0:12:27.03:0,27,408	1/1:3,5:8:18.03:394,18,0	1/1:3,1:5:3.01:68,3,0	0/0:8,0:8:14.40:0,14,211	0/0:5,0:5:9.03:0,9,180	0/0:4,0:4:9.03:0,9,179	0/0:11,0:11:24.08:0,24,509	0/0:8,0:8:18.06:0,18,394	0/0:15,0:15:39.09:0,39,727	0/0:2,0:10:1.89:0,2,4	0/0:14,0:14:30.09:0,30,550	0/0:9,0:9:18.01:0,18,234	0/0:5,0:5:9.03:0,9,179	0/0:4,0:4:6.01:0,6,75	0/0:3,0:3:6.02:0,6,132	0/0:3,0:3:9.03:0,9,180	./.	0/0:13,0:13:36.07:0,36,590	0/0:12,0:12:27.04:0,27,466	0/0:9,0:9:24.07:0,24,486
chr10	73507863	.	GTA	G	253.44	PASS	AB=0.907;AC=11;AF=0.220;AN=50;BaseQRankSum=2.838;DP=222;FS=0.971;HRun=0;HaplotypeScore=33.2112;InbreedingCoeff=-0.1741;MQ=65.23;MQ0=1;MQRankSum=0.628;QD=1.93;ReadPosRankSum=-0.570;VQSLOD=1.2485;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:2.98:0,3,21	0/0:3,0:3:9.03:0,9,145	0/0:3,0:2:1.82:0,2,5	0/0:3,0:2:2.84:0,3,14	0/1:7,1:8:21.30:21,0,176	0/0:18,0:18:45.02:0,45,685	1/1:3,0:3:2.99:25,3,0	0/1:44,5:49:64.02:64,0,1129	0/0:7,0:7:12.04:0,12,188	0/0:5,0:5:15.05:0,15,212	0/1:5,1:6:24.31:24,0,115	0/0:1,0:3:5.74:0,6,38	./.	0/0:5,0:5:6.01:0,6,73	0/0:6,0:6:12.04:0,12,194	0/1:7,0:7:24.33:24,0,110	0/1:14,1:15:9.26:9,0,358	0/0:7,0:8:12.02:0,12,142	0/1:6,5:11:99:151,0,184	0/0:3,0:3:6.02:0,6,97	0/0:7,0:7:18.06:0,18,287	./.	./.	0/0:3,0:4:3:0,3,26	0/1:8,0:8:21.24:21,0,131	0/0:8,0:8:15.05:0,15,240	0/1:8,0:8:5.69:6,0,219	0/1:14,2:16:39.59:40,0,402
chr10	73508498	.	GA	G	2560.32	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.400;DP=606;FS=2.894;HRun=9;HaplotypeScore=60.1265;InbreedingCoeff=0.9985;MQ=72.37;MQ0=0;MQRankSum=-1.219;QD=22.66;ReadPosRankSum=2.277;VQSLOD=4.6979;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,32:37:76.67:832,77,0	0/0:10,0:10:30.09:0,30,346	0/0:16,0:16:23.01:0,23,391	0/0:16,0:16:39.11:0,39,437	0/0:35,0:35:99:0,99,1119	0/0:20,0:20:57.15:0,57,639	0/0:16,0:16:48.14:0,48,553	0/0:22,0:22:54.13:0,54,597	0/0:17,0:17:48.14:0,48,553	1/1:2,26:28:78.02:709,78,0	1/1:2,23:25:66.02:604,66,0	0/0:21,0:21:60.17:0,60,682	0/0:14,0:14:33.10:0,33,380	0/0:22,0:22:54.16:0,54,623	0/0:24,0:25:75.04:0,75,836	0/0:15,0:15:42.12:0,42,485	0/0:30,0:30:76.07:0,76,853	0/0:14,0:14:30.04:0,30,320	0/0:19,0:19:48.14:0,48,551	0/0:44,0:44:99:0,126,1411	0/0:16,0:16:45.13:0,45,519	0/0:20,1:21:29.68:0,30,584	0/0:20,0:20:54.15:0,54,612	0/0:20,0:20:60.18:0,60,691	1/1:1,22:23:63.03:576,63,0	0/0:19,1:20:29.70:0,30,596	0/0:25,0:25:75.16:0,75,840	0/0:15,0:15:39.12:0,39,450
chr10	73510670	.	A	AAGGAG	2825.23	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-5.449;DP=708;FS=1.311;HRun=0;HaplotypeScore=140.2411;InbreedingCoeff=0.8451;MQ=78.72;MQ0=16;MQRankSum=-0.031;QD=14.20;ReadPosRankSum=0.179;VQSLOD=3.4152;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:24:15.50:249,15,0	0/0:5,0:5:15.05:0,15,267	0/0:77,0:43:24.31:0,24,280	0/1:101,0:47:23.69:24,0,302	0/0:17,0:17:21.06:0,21,347	0/0:15,0:15:39.12:0,39,677	0/0:35,0:35:60.21:0,60,1093	0/0:24,0:24:36.12:0,36,613	0/0:25,0:25:57.11:0,57,976	1/1:9,5:15:18.06:466,18,0	1/1:6,3:9:6.02:117,6,0	0/0:22,0:22:51.17:0,51,923	0/0:26,0:26:57.20:0,57,1043	0/0:26,0:26:63.16:0,63,1073	0/0:28,0:28:66.17:0,66,1187	0/0:24,0:24:39.12:0,39,670	0/0:24,0:24:48.14:0,48,837	1/1:7,24:32:51.18:1456,51,0	0/0:16,0:15:24.08:0,24,395	0/0:11,0:11:15.05:0,15,251	0/0:34,0:34:84.29:0,84,1516	0/0:12,0:12:27.09:0,27,501	0/0:12,0:12:18.04:0,18,275	0/0:31,0:31:60.14:0,60,1043	1/1:6,9:15:24.08:685,24,0	0/0:15,0:15:21.06:0,21,349	0/0:15,0:15:23.94:0,24,409	0/0:14,0:14:21.07:0,21,389
chr10	73510840	.	A	ACC	759.95	PASS	AB=0.938;AC=9;AF=0.161;AN=56;BaseQRankSum=-1.024;DP=551;FS=8.083;HRun=9;HaplotypeScore=68.4463;InbreedingCoeff=0.8150;MQ=70.93;MQ0=1;MQRankSum=0.733;QD=9.05;ReadPosRankSum=-4.248;VQSLOD=-0.5679;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:7,1:21:8.73:90,9,0	0/0:9,0:9:21.03:0,21,224	0/1:14,0:12:11.56:12,0,130	0/0:15,0:15:30.02:0,30,302	0/0:18,0:18:51.13:0,51,542	0/0:23,0:23:66.17:0,66,702	0/0:33,0:34:72.07:0,72,803	0/0:27,0:27:45.05:0,45,479	0/0:25,0:25:69.13:0,69,717	1/1:6,5:12:9:113,9,0	1/1:4,13:18:20.56:285,21,0	0/0:22,0:22:57.11:0,57,599	0/0:17,0:17:42.09:0,42,447	0/0:22,0:22:57.13:0,57,606	0/0:29,0:30:71.88:0,72,746	0/0:19,0:19:54.12:0,54,567	0/0:25,0:26:60.07:0,60,693	0/0:22,0:22:63.16:0,63,671	0/0:17,0:18:41.83:0,42,427	0/0:23,0:24:56.57:0,57,565	0/0:24,0:24:63.10:0,63,652	0/0:17,0:17:36:0,36,363	0/0:13,0:13:39.10:0,39,415	0/0:25,0:25:69.14:0,69,725	1/1:4,13:18:27.09:416,27,0	0/0:18,0:18:51.12:0,51,543	0/0:16,0:15:48.12:0,48,511	0/0:3,0:3:6:0,6,64
chr10	73511185	.	T	TGATG	2268.15	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.007;DP=587;FS=3.450;HRun=0;HaplotypeScore=91.5795;InbreedingCoeff=0.9947;MQ=71.88;MQ0=0;MQRankSum=-1.717;QD=59.69;ReadPosRankSum=-0.250;VQSLOD=5.3329;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:38:84.29:2363,84,0	0/0:8,0:8:24.07:0,24,467	0/0:17,0:14:29.27:0,29,578	0/0:16,0:15:25.40:0,25,505	0/0:25,0:25:72.25:0,72,1509	0/0:24,0:24:69.24:0,69,1447	0/0:13,0:13:36.12:0,36,755	0/0:31,0:31:87.28:0,87,1753	0/0:13,0:13:39.12:0,39,767	0/0:24,0:24:69.24:0,69,1447	0/0:25,0:25:75.25:0,75,1533	0/0:15,0:15:45.15:0,45,933	0/0:23,0:23:69.24:0,69,1422	0/0:22,0:22:66.20:0,66,1306	0/0:22,0:22:66.22:0,66,1344	0/0:25,0:25:75.26:0,75,1548	0/0:27,0:27:78.27:0,78,1636	0/0:23,0:23:69.22:0,69,1406	0/0:17,0:17:51.17:0,51,1034	0/0:29,0:29:87.30:0,87,1777	0/0:29,0:29:87.28:0,87,1740	0/0:10,0:10:30.10:0,30,629	0/0:12,0:12:36.12:0,36,754	0/0:13,0:13:39.12:0,39,769	0/0:20,0:20:60.21:0,60,1240	0/0:26,0:26:78.25:0,78,1554	0/0:29,0:29:87.30:0,87,1824	0/0:11,0:11:33.09:0,33,615
chr10	73511632	.	TGG	T	2556.48	PASS	AB=0.918;AC=12;AF=0.214;AN=56;BaseQRankSum=3.927;DP=555;FS=2.602;HRun=11;HaplotypeScore=78.0529;InbreedingCoeff=0.7995;MQ=82.87;MQ0=0;MQRankSum=-0.235;QD=20.45;ReadPosRankSum=5.883;VQSLOD=3.0194;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:53.58:0,54,652	0/1:7,1:8:7.86:8,0,282	0/0:21,0:21:30.04:0,30,376	0/1:17,0:18:16.98:17,0,124	0/0:22,0:26:50.06:0,50,641	0/0:20,0:21:53.61:0,54,745	0/0:16,0:16:37.42:0,37,520	0/0:20,0:22:34.90:0,35,412	0/0:25,0:26:65.65:0,66,873	0/0:7,0:22:43.14:0,43,213	0/0:7,0:22:37.95:0,38,162	1/1:3,11:14:27.05:287,27,0	1/1:0,25:25:75.19:798,75,0	0/0:14,0:15:32.54:0,33,385	0/0:17,0:18:45.05:0,45,554	0/0:17,0:19:40.51:0,41,586	0/0:19,0:21:47.10:0,47,603	0/0:16,0:16:42.13:0,42,626	0/0:24,0:26:66.10:0,66,825	0/0:18,0:22:50.05:0,50,597	0/0:18,0:18:42.09:0,42,559	1/1:1,20:21:57.14:607,57,0	1/1:4,21:25:57.13:606,57,0	1/1:1,13:14:39.10:415,39,0	0/0:4,0:21:45.92:0,46,187	0/0:12,0:15:35.01:0,35,372	0/0:30,0:30:71.55:0,72,987	0/0:5,0:5:15.02:0,15,188
chr10	73512061	.	TA	T	642.70	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.741;DP=548;FS=5.499;HRun=5;HaplotypeScore=53.9782;InbreedingCoeff=0.9864;MQ=86.66;MQ0=0;MQRankSum=-3.996;QD=25.71;ReadPosRankSum=2.590;VQSLOD=3.0321;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:66.17:738,66,0	0/0:10,0:10:27.09:0,27,369	0/0:22,0:22:60.11:0,60,749	0/0:18,0:18:51.11:0,51,651	0/0:17,1:18:17.09:0,17,584	0/0:23,0:23:66.20:0,66,873	0/0:24,0:24:69.22:0,69,928	0/0:37,0:37:96.28:0,96,1256	0/0:16,0:16:42.14:0,42,574	0/0:23,0:23:60.19:0,60,805	0/0:27,0:27:78.24:0,78,1034	0/0:17,0:17:48.14:0,48,630	0/0:16,0:16:48.16:0,48,654	0/0:11,0:11:33.07:0,33,402	0/0:22,0:22:63.18:0,63,816	0/0:18,0:18:54.17:0,54,722	0/0:19,0:19:57.15:0,57,729	0/0:19,0:19:54.17:0,54,723	0/0:12,0:12:36.11:0,36,476	0/0:34,0:34:93.29:0,93,1240	0/0:21,0:21:60.17:0,60,788	0/0:24,0:24:63.21:0,63,861	0/0:24,0:24:66.19:0,66,861	0/0:11,0:11:33.06:0,33,415	0/0:14,0:14:42.13:0,42,558	0/0:19,0:19:57.19:0,57,779	0/0:16,0:16:42.12:0,42,556	0/0:8,0:8:24.08:0,24,328
chr10	73512552	.	CGTGTGTGTGTGTGTGTGTGT	C	1345.95	PASS	AB=0.809;AC=8;AF=0.143;AN=56;BaseQRankSum=7.166;DP=619;FS=21.772;HRun=0;HaplotypeScore=280.7017;InbreedingCoeff=0.6241;MQ=65.21;MQ0=11;MQRankSum=-0.301;QD=10.35;ReadPosRankSum=-0.595;VQSLOD=1.1108;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:31:7.72:82,0,8	0/0:13,0:13:15.05:0,15,1241	0/0:29,0:24:5.95:0,6,42	0/0:22,0:18:2.98:0,3,21	0/0:26,0:25:33.10:0,33,2075	0/0:10,0:11:9.03:0,9,605	0/0:25,0:24:36.96:0,37,1388	0/0:34,0:32:30.63:0,31,433	0/0:16,0:16:20.71:0,21,1135	1/1:16,13:28:28.43:432,28,0	1/1:15,15:29:12.03:207,12,0	0/0:15,0:18:12.04:0,12,368	0/0:10,0:10:13.27:0,13,370	0/0:12,0:12:27.09:0,27,1459	0/0:27,0:27:42.11:0,42,2447	0/0:16,0:15:18.50:0,18,955	0/0:44,0:46:78.15:0,78,4725	0/1:16,0:16:6.37:133,0,6	0/0:15,0:15:8.99:0,9,217	0/0:18,0:20:21.07:0,21,1345	0/0:29,0:28:42.10:0,42,1802	0/0:12,0:14:11.99:0,12,231	0/0:11,0:14:15:0,15,279	0/0:33,0:36:27.06:0,27,839	1/1:9,13:22:8.46:637,8,0	0/0:21,0:21:37.21:0,37,1421	0/0:22,0:22:39.05:0,39,1770	0/0:10,0:11:18.01:0,18,700
chr10	73512850	.	GGT	G	915.54	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.651;DP=605;FS=2.471;HRun=0;HaplotypeScore=86.9344;InbreedingCoeff=0.9685;MQ=72.11;MQ0=14;MQRankSum=-0.574;QD=22.33;ReadPosRankSum=2.401;VQSLOD=4.2932;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,31:40:73.67:1010,74,0	0/0:9,0:9:13.82:0,14,118	0/0:39,0:18:39.60:0,40,396	0/0:22,0:10:21.79:0,22,210	0/0:23,0:22:53.90:0,54,850	0/0:11,0:11:27.41:0,27,420	0/0:22,0:20:59.94:0,60,947	0/0:35,0:35:95.99:0,96,1334	0/0:28,0:28:81.18:0,81,1313	0/0:20,0:19:48.03:0,48,534	0/0:17,0:18:50.95:0,51,596	0/0:9,0:9:21.05:0,21,298	0/0:15,0:15:35.80:0,36,383	0/0:18,0:18:51:0,51,644	0/0:27,0:27:72.10:0,72,1103	0/0:19,0:19:57.04:0,57,930	0/0:28,0:28:78.21:0,78,1340	0/0:11,0:11:24.06:0,24,331	0/0:20,0:20:46.51:0,47,703	0/0:23,0:22:63.09:0,63,891	0/0:20,0:20:50.89:0,51,741	0/0:16,0:15:41.98:0,42,511	0/0:19,0:19:27.31:0,27,361	0/0:20,0:20:35.79:0,36,473	0/0:23,0:20:47.85:0,48,601	0/0:24,0:24:66.45:0,66,987	0/0:29,1:29:84.04:0,84,1300	0/0:15,0:15:42.55:0,43,672
chr10	73512851	.	G	GTT	1222.28	PASS	AB=0.730;AC=17;AF=0.304;AN=56;BaseQRankSum=3.281;DP=613;FS=1.987;HRun=14;HaplotypeScore=91.7930;InbreedingCoeff=0.4167;MQ=71.71;MQ0=15;MQRankSum=-1.369;QD=5.38;ReadPosRankSum=-0.745;VQSLOD=0.2902;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:63.61:0,64,271	0/0:9,0:9:19.80:0,20,117	0/0:37,0:18:6.18:0,6,79	0/0:22,0:10:5.58:0,6,32	0/0:20,1:21:33.76:0,34,266	0/0:11,0:11:11.64:0,12,115	0/0:22,0:20:42.73:0,43,337	0/0:33,0:35:24.25:0,24,366	0/0:24,0:28:28.20:0,28,388	1/1:7,16:23:33.72:331,34,0	1/1:6,10:19:37.90:391,38,0	0/1:3,0:9:14.81:15,0,16	0/1:7,1:15:7.44:107,0,7	0/0:17,0:19:20.24:0,20,156	0/1:26,0:28:23.70:24,0,292	0/0:17,0:19:38.06:0,38,334	0/0:26,0:28:60.43:0,60,525	1/1:4,0:11:5.67:34,6,0	0/0:16,0:19:8.97:0,9,166	0/0:21,0:22:23.63:0,24,268	0/0:19,0:19:29.16:0,29,224	0/1:4,1:14:4.77:66,0,5	1/1:3,2:20:21.44:168,21,0	0/1:6,0:19:1.51:45,0,2	1/1:11,9:21:0.12:196,0,0	0/1:20,1:25:18.92:19,0,248	0/0:29,0:29:46.83:0,47,413	0/1:15,0:17:0.14:0,0,199
chr10	73513054	.	C	CTT	748.73	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=1.799;DP=513;FS=4.854;HRun=14;HaplotypeScore=87.1432;InbreedingCoeff=0.7866;MQ=67.45;MQ0=4;MQRankSum=1.615;QD=8.61;ReadPosRankSum=-0.930;VQSLOD=1.6820;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/1:8,0:8:4.70:5,0,107	0/0:24,0:13:17.21:0,17,130	0/0:22,0:15:3.13:0,3,47	0/0:36,0:36:18.49:0,18,205	0/0:12,0:13:11.42:0,11,87	0/0:15,0:16:20.45:0,20,210	0/0:26,0:25:37.97:0,38,318	0/0:22,0:22:35.10:0,35,285	1/1:9,13:23:38.40:390,38,0	1/1:20,3:22:28.19:280,28,0	0/0:16,0:16:23.64:0,24,199	0/0:13,0:13:20.69:0,21,174	0/0:23,0:23:25.62:0,26,254	0/0:32,0:31:35.01:0,35,286	0/0:9,0:9:14.85:0,15,125	0/0:24,0:24:41.53:0,42,344	1/1:2,0:17:23.84:84,24,0	0/0:14,0:14:20.77:0,21,169	0/0:22,0:21:38.48:0,38,310	0/0:10,0:10:17.85:0,18,146	0/0:9,0:10:12.35:0,12,125	0/0:21,0:21:4.14:0,4,151	0/0:17,0:17:29.30:0,29,234	1/1:1,11:13:12.03:146,12,0	0/0:19,0:19:26.67:0,27,260	0/0:19,0:19:18:0,18,274	0/0:15,0:15:23.58:0,24,200
chr10	73514004	.	G	GA	2513.04	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=1.279;DP=506;FS=5.076;HRun=7;HaplotypeScore=53.8238;InbreedingCoeff=0.9669;MQ=81.44;MQ0=0;MQRankSum=-1.325;QD=18.34;ReadPosRankSum=1.923;VQSLOD=3.3282;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:84.12:0,84,810	0/0:6,0:6:18:0,18,166	0/0:16,0:16:30.04:0,30,286	0/0:11,0:11:21.03:0,21,201	0/0:22,0:22:60.08:0,60,573	0/0:14,0:14:42.07:0,42,406	0/0:18,0:18:45.07:0,45,435	0/0:21,0:20:51.07:0,51,492	0/0:16,0:16:33.04:0,33,318	1/1:4,0:23:45.21:265,45,0	1/1:1,1:9:22.62:111,23,0	1/1:1,14:15:39.12:471,39,0	1/1:5,7:12:15.05:181,15,0	0/0:26,0:26:72.11:0,72,695	0/0:28,0:28:78.12:0,78,753	0/0:23,0:23:69.11:0,69,666	0/0:30,0:30:72.09:0,72,689	1/1:3,0:21:40.22:204,40,0	0/0:22,0:22:63.08:0,63,597	0/0:19,0:19:51.08:0,51,492	0/0:15,0:15:39.06:0,39,377	1/1:1,13:14:36.11:435,36,0	1/1:0,10:10:20.81:253,21,0	1/1:1,22:23:57.17:689,57,0	1/1:1,0:10:23:117,23,0	0/0:20,0:21:42.34:0,42,507	0/0:27,0:27:78.10:0,78,747	0/0:1,0:1:3:0,3,29
chr10	73515135	.	T	TAA	2986.81	PASS	AB=0.563;AC=19;AF=0.352;AN=54;BaseQRankSum=3.886;DP=412;FS=1.371;HRun=10;HaplotypeScore=56.5077;InbreedingCoeff=0.8813;MQ=75.90;MQ0=0;MQRankSum=0.163;QD=20.05;ReadPosRankSum=0.784;VQSLOD=2.3820;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:21:54.13:764,54,0	0/0:7,0:7:21.05:0,21,213	0/0:18,0:18:26.02:0,26,274	0/0:9,0:9:5.99:0,6,61	0/0:18,0:18:51.11:0,51,519	0/0:16,0:16:42.07:0,42,420	0/0:8,0:8:15.02:0,15,153	0/0:21,0:22:41.72:0,42,408	0/0:14,0:14:36.05:0,36,366	1/1:1,14:15:42.11:598,42,0	1/1:1,10:12:29.50:362,30,0	1/1:1,0:10:22.46:79,22,0	1/1:0,0:5:9.98:35,10,0	0/0:11,0:12:26.79:0,27,327	0/0:11,0:11:30.03:0,30,298	0/0:8,0:8:21.03:0,21,214	0/0:37,0:36:99:0,102,1029	1/1:3,0:28:69.05:654,69,0	0/0:19,0:20:41.77:0,42,403	0/0:17,0:17:44.87:0,45,433	0/0:4,0:4:12.03:0,12,122	1/1:1,0:6:10.16:37,10,0	0/1:2,0:9:15.03:28,0,15	./.	1/1:1,14:19:40.60:519,41,0	0/0:25,0:25:66.09:0,66,660	0/0:16,0:16:42.09:0,42,427	1/1:6,0:24:31.40:118,31,0
chr10	73515296	.	T	TG	489.37	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.337;DP=485;FS=0.000;HRun=1;HaplotypeScore=50.2112;InbreedingCoeff=0.9672;MQ=68.42;MQ0=1;MQRankSum=-0.937;QD=30.59;ReadPosRankSum=2.734;VQSLOD=3.2928;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1328	0/0:5,0:5:15.05:0,15,193	0/0:23,0:18:51.14:0,51,632	0/0:37,0:32:78.71:0,79,942	0/0:14,0:14:36.12:0,36,466	0/0:13,0:13:36.10:0,36,453	0/0:23,0:23:66.20:0,66,841	0/0:14,0:14:39.13:0,39,506	0/0:11,0:11:33.11:0,33,428	0/0:14,0:14:36.12:0,36,467	0/0:19,0:19:54.18:0,54,700	0/0:11,0:11:30.10:0,30,389	0/0:11,0:11:30.10:0,30,388	0/0:22,0:22:57.17:0,57,724	0/0:17,0:17:48.14:0,48,609	0/0:17,0:17:51.17:0,51,661	0/0:26,0:26:75.24:0,75,974	1/1:1,15:16:39.13:584,39,0	0/0:20,0:20:54.18:0,54,699	0/0:15,0:15:42.07:0,42,510	0/0:27,0:27:78.25:0,78,1010	0/0:12,0:12:36.12:0,36,467	0/0:7,0:7:18.06:0,18,234	0/0:16,0:16:48.16:0,48,623	0/0:18,0:18:54.15:0,54,685	0/0:24,0:24:72.23:0,72,934	0/0:12,0:12:36.12:0,36,464	0/0:6,0:6:18.06:0,18,231
chr10	73516714	.	C	CAGTTTGT	14761.09	PASS	AB=0.747;AC=20;AF=0.357;AN=56;BaseQRankSum=-6.854;DP=562;FS=0.366;HRun=0;HaplotypeScore=150.3479;InbreedingCoeff=0.8353;MQ=80.42;MQ0=0;MQRankSum=-16.523;QD=69.63;ReadPosRankSum=-1.278;VQSLOD=4.9195;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,21:33:72.22:2356,72,0	0/0:6,0:6:9.03:0,9,222	0/0:23,0:23:47.98:0,48,1033	0/0:13,0:13:24.97:0,25,551	0/0:26,0:26:72.23:0,72,1725	0/0:24,0:24:60.21:0,60,1472	0/0:19,0:19:48.16:0,48,1176	0/0:15,0:15:26.19:0,26,646	0/0:25,0:25:66.23:0,66,1620	1/1:7,11:19:45.15:1718,45,0	1/1:12,9:21:36.12:1121,36,0	0/1:7,14:21:25.81:1650,0,26	1/1:6,12:19:45.15:1646,45,0	0/0:18,0:18:51.16:0,51,1164	0/0:22,0:22:51.18:0,51,1216	0/0:20,0:20:48.15:0,48,1131	0/0:32,0:32:75.26:0,75,1813	1/1:6,5:11:24.08:795,24,0	0/0:21,0:21:48.16:0,48,1159	0/0:28,0:28:81.26:0,81,1875	0/0:26,0:26:60.21:0,60,1461	1/1:10,12:22:48.15:1609,48,0	1/1:9,6:16:42.14:1339,42,0	1/1:7,16:23:42.13:1344,42,0	1/1:4,6:10:24.08:885,24,0	0/1:15,2:17:99:299,0,901	0/0:17,0:17:48.16:0,48,1169	0/0:15,0:15:39.13:0,39,960
chr10	73516923	.	C	CGTAA	3101.83	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.069;DP=530;FS=0.550;HRun=0;HaplotypeScore=107.6271;InbreedingCoeff=0.9990;MQ=93.86;MQ0=0;MQRankSum=-10.891;QD=59.65;ReadPosRankSum=0.666;VQSLOD=5.2820;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,2054	0/0:12,0:12:36.12:0,36,755	0/0:20,0:20:57.13:0,57,1040	0/0:29,0:29:67.56:0,68,1506	0/0:20,0:20:60.18:0,60,1164	0/0:17,0:17:48.16:0,48,1007	0/0:18,0:18:54.16:0,54,1044	0/0:26,0:26:75.21:0,75,1447	0/0:20,0:20:60.21:0,60,1237	1/1:4,15:19:54.18:1159,54,0	1/1:3,6:9:24.08:519,24,0	0/0:20,0:20:57.18:0,57,1132	0/0:15,0:15:45.11:0,45,858	0/0:11,0:11:33.10:0,33,651	0/0:23,0:23:69.23:0,69,1398	0/0:13,0:13:39.12:0,39,779	0/0:28,0:28:84.24:0,84,1680	1/1:2,7:9:27.09:631,27,0	0/0:19,0:19:57.19:0,57,1155	0/0:23,0:23:69.22:0,69,1408	0/0:26,0:26:75.20:0,75,1419	0/0:16,0:16:42.14:0,42,880	0/0:22,0:22:66.21:0,66,1333	0/0:17,0:17:51.16:0,51,1013	1/1:3,12:15:45.15:954,45,0	0/0:15,0:15:45.15:0,45,909	0/0:19,0:19:57.20:0,57,1195	0/0:14,0:14:42.14:0,42,871
chr10	73516926	.	AG	A	612.24	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.465;DP=517;FS=3.826;HRun=2;HaplotypeScore=75.4755;InbreedingCoeff=0.9957;MQ=92.39;MQ0=0;MQRankSum=-9.838;QD=14.58;ReadPosRankSum=1.257;VQSLOD=3.3417;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.29:0,93,1372	0/0:12,0:12:36.12:0,36,540	0/0:18,0:18:26.51:0,27,695	0/0:27,0:27:75.21:0,75,1076	0/0:19,0:19:54.18:0,54,808	0/0:18,0:18:54.17:0,54,780	0/0:16,0:16:48.16:0,48,719	0/0:23,0:23:66.22:0,66,990	0/0:21,0:21:63.20:0,63,922	1/1:0,15:15:43.59:279,44,0	1/1:0,6:6:17.46:99,17,0	0/0:20,0:20:57.19:0,57,854	0/0:13,0:13:39.13:0,39,582	0/0:12,0:12:36.08:0,36,513	0/0:24,0:24:69.23:0,69,1032	0/0:12,0:12:36.12:0,36,540	0/0:31,0:31:93.29:0,93,1351	1/1:1,7:8:20.76:145,21,0	0/0:20,0:20:60.20:0,60,899	0/0:23,0:23:69.23:0,69,1021	0/0:27,0:27:78.24:0,78,1144	0/0:15,0:15:45.15:0,45,674	0/0:22,0:22:63.21:0,63,929	0/0:17,0:17:51.17:0,51,763	1/1:1,12:13:38.11:249,38,0	0/0:17,0:17:51.17:0,51,762	0/0:20,0:20:60.20:0,60,894	0/0:14,0:14:42.14:0,42,629
chr10	73517341	.	AT	A	2860.71	PASS	AB=0.873;AC=12;AF=0.214;AN=56;BaseQRankSum=11.658;DP=706;FS=14.684;HRun=10;HaplotypeScore=74.3428;InbreedingCoeff=0.7648;MQ=80.66;MQ0=1;MQRankSum=0.100;QD=15.38;ReadPosRankSum=1.170;VQSLOD=2.6156;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,31:38:65.90:766,66,0	0/0:9,0:9:27.07:0,27,299	0/0:19,1:20:6.02:0,6,295	0/1:19,2:21:9.35:9,0,282	0/0:19,0:19:39.09:0,39,417	0/0:24,0:24:66.17:0,66,723	0/0:23,0:23:48.12:0,48,523	0/0:32,1:34:48.97:0,49,745	0/0:24,1:25:25.06:0,25,485	1/1:4,35:40:99:911,107,0	1/1:2,17:19:47.98:417,48,0	0/0:26,2:28:26.10:0,26,738	0/0:27,0:27:66.13:0,66,703	0/0:18,2:20:25.07:0,25,496	0/0:23,2:26:7.87:0,8,517	0/0:23,0:23:63.17:0,63,697	0/0:26,0:26:72.18:0,72,782	1/1:1,17:18:47.99:417,48,0	0/0:24,1:26:42.94:0,43,675	0/0:26,1:27:43.12:0,43,691	0/0:33,2:35:60.78:0,61,825	0/0:26,1:27:43.13:0,43,704	0/0:23,2:25:40.09:0,40,651	0/0:32,0:32:90.24:0,90,996	1/1:3,22:25:53.97:469,54,0	0/1:20,5:25:52.43:52,0,515	0/0:32,1:33:64.15:0,64,923	0/0:10,0:10:24.06:0,24,266
chr10	73518077	.	GA	G	794.32	PASS	AB=0.909;AC=20;AF=0.357;AN=56;BaseQRankSum=5.654;DP=386;FS=0.558;HRun=14;HaplotypeScore=44.6153;InbreedingCoeff=0.6557;MQ=66.23;MQ0=2;MQRankSum=1.281;QD=5.26;ReadPosRankSum=3.991;VQSLOD=1.2734;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,8:15:14.69:102,15,0	0/0:6,0:6:15.02:0,15,139	0/0:20,0:8:14.84:0,15,114	0/1:23,0:15:7.16:7,0,62	0/0:13,0:12:30.45:0,30,259	0/0:10,0:10:17.98:0,18,152	0/0:25,3:29:27.70:0,28,515	0/0:21,0:25:24.23:0,24,188	0/0:13,0:13:18.01:0,18,164	1/1:3,7:12:0.22:128,0,0	1/1:7,8:16:14.74:103,15,0	1/1:4,5:9:5.90:41,6,0	1/1:4,5:10:10.91:67,11,0	0/0:12,0:13:23.99:0,24,208	0/0:11,0:11:24.77:0,25,198	0/0:11,2:13:5.48:0,5,194	0/0:17,2:19:3.84:0,4,306	1/1:5,10:15:22.87:163,23,0	0/0:12,0:14:23.85:0,24,204	0/0:17,1:18:7.69:0,8,205	0/0:11,1:13:0.26:0,0,125	0/0:2,0:2:0:0,0,0	1/1:4,2:8:9.96:53,10,0	1/1:6,13:21:33.76:217,34,0	1/1:2,7:9:11.81:82,12,0	0/1:10,2:12:20.11:20,0,110	0/0:10,0:11:17.84:0,18,146	0/0:3,1:4:9.01:0,9,84
chr10	73519683	.	A	ACG	324.14	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=4.874;DP=530;FS=7.048;HRun=0;HaplotypeScore=146.7609;InbreedingCoeff=0.7480;MQ=68.90;MQ0=2;MQRankSum=-0.805;QD=3.03;ReadPosRankSum=1.417;VQSLOD=1.8241;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:11,0:11:12:0,12,137	0/0:19,0:12:8.90:0,9,73	0/0:27,0:16:22.99:0,23,244	0/0:18,0:18:18.05:0,18,220	0/0:14,0:14:2.84:0,3,39	0/0:33,0:33:70.50:0,71,848	0/0:21,0:19:51.14:0,51,624	0/0:24,0:24:11.63:0,12,260	0/0:25,0:25:35.53:0,36,400	0/0:12,0:12:11.95:0,12,101	1/1:21,1:22:8.87:132,9,0	1/1:23,1:24:12.76:149,13,0	0/0:20,0:20:30:0,30,376	0/0:19,0:19:23.75:0,24,297	0/0:16,0:16:12.04:0,12,153	0/0:29,0:29:58:0,58,689	0/0:16,0:16:34.44:0,34,360	0/0:16,0:15:33.08:0,33,400	0/0:5,0:5:9.03:0,9,114	0/0:23,0:22:39.13:0,39,506	1/1:13,0:13:3.01:36,3,0	0/1:11,0:11:0:0,0,0	1/1:34,2:37:11.97:144,12,0	0/0:11,0:11:15.01:0,15,161	0/0:13,0:12:27.08:0,27,339	0/0:15,0:15:17.99:0,18,185	0/0:2,0:2:6.02:0,6,78
chr10	73519691	.	G	GCGCA	596.24	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=4.429;DP=502;FS=12.314;HRun=0;HaplotypeScore=141.5315;InbreedingCoeff=0.7013;MQ=61.43;MQ0=7;MQRankSum=-2.404;QD=3.97;ReadPosRankSum=0.555;VQSLOD=1.4517;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:0:0,0,0	0/0:11,0:11:12:0,12,181	0/0:13,0:5:8.67:0,9,103	0/0:28,0:12:23.94:0,24,264	0/0:16,0:16:17.35:0,17,319	0/0:14,0:14:2.60:0,3,59	0/0:30,0:29:68.84:0,69,1183	0/0:23,0:21:45.17:0,45,952	0/0:21,0:21:21.07:0,21,406	0/0:23,0:23:22.55:0,23,454	0/0:12,0:11:8.95:0,9,88	1/1:5,13:21:11.72:190,12,0	1/1:4,15:23:17.72:241,18,0	0/0:23,0:23:16.08:0,16,530	0/0:20,0:20:23.57:0,24,431	0/0:9,0:9:12.04:0,12,219	0/0:27,0:27:59.74:0,60,993	0/0:16,0:16:39.68:0,40,478	0/0:13,0:12:33.07:0,33,553	0/0:5,0:5:9.03:0,9,175	0/0:22,0:20:39.13:0,39,761	1/1:4,0:13:3.48:82,3,0	1/1:5,6:10:2.92:17,3,0	1/1:5,26:34:11.97:215,12,0	0/0:9,0:10:11.79:0,12,183	0/1:15,0:13:0.33:0,0,479	0/0:14,0:14:17.99:0,18,247	0/0:2,0:2:6.02:0,6,117
chr10	73519693	.	ACG	A	558.92	PASS	AB=0.973;AC=12;AF=0.222;AN=54;BaseQRankSum=2.124;DP=487;FS=6.640;HRun=0;HaplotypeScore=111.7085;InbreedingCoeff=0.2726;MQ=61.25;MQ0=9;MQRankSum=-0.137;QD=3.73;ReadPosRankSum=-1.589;VQSLOD=1.6869;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:11,0:11:11.65:0,12,132	0/0:15,0:5:7.34:0,7,30	0/0:28,0:12:13.64:0,14,96	0/0:16,0:16:15.48:0,15,250	0/0:14,0:14:2.99:0,3,24	0/0:30,0:29:62.71:0,63,809	0/0:26,0:24:46.81:0,47,591	0/0:21,0:21:10.95:0,11,235	0/1:21,1:22:30.78:332,0,31	1/1:8,3:10:9.02:109,9,0	1/1:20,0:20:2.95:46,3,0	0/1:16,1:17:0.46:32,0,0	0/0:23,0:23:27.06:0,27,430	0/0:17,1:18:10.95:0,11,267	0/0:9,0:9:11.65:0,12,109	0/0:26,0:26:50.66:0,51,612	0/1:14,1:15:99:121,0,107	0/0:13,0:11:8.79:0,9,172	0/0:5,0:5:9.02:0,9,138	0/0:22,0:20:39:0,39,617	1/1:13,0:13:1.55:4,2,0	0/0:10,0:9:0:0,0,0	0/1:28,0:28:4.10:12,0,4	0/1:10,0:10:34.98:35,0,48	0/0:14,0:12:17.05:0,17,305	0/1:14,0:14:5.82:6,0,72	0/0:2,0:2:5.95:0,6,75
chr10	73519695	.	GCA	G	52.10	PASS	AB=0.923;AC=8;AF=0.154;AN=52;BaseQRankSum=1.452;DP=485;FS=0.000;HRun=0;HaplotypeScore=112.2147;InbreedingCoeff=0.0710;MQ=59.32;MQ0=11;MQRankSum=-1.148;QD=0.43;ReadPosRankSum=-1.537;VQSLOD=1.2866;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:9,2:11:6.02:0,6,92	0/0:15,0:5:0:0,0,0	0/1:29,0:10:0:0,0,0	0/0:15,0:15:12.51:0,13,188	./.	0/0:26,0:26:31.35:0,31,465	0/0:25,1:24:1.41:0,1,410	0/1:20,2:22:22.61:23,0,128	0/0:21,0:21:12.23:0,12,258	1/1:11,0:10:5.93:40,6,0	0/0:19,0:19:3.27:0,3,57	0/0:17,0:17:11.87:0,12,91	0/0:22,0:22:21.06:0,21,291	0/1:16,2:18:20.07:20,0,169	0/0:9,0:9:3.01:0,3,47	0/0:21,3:25:16.59:0,17,343	0/0:15,0:15:4.49:0,4,294	0/1:10,2:10:37.60:45,0,38	0/0:6,0:6:6.02:0,6,94	0/0:21,0:19:30.05:0,30,439	0/0:13,0:13:2.04:0,2,6	0/0:11,0:10:0:0,0,0	0/0:27,0:27:8.99:0,9,81	0/0:13,0:13:9.03:0,9,138	0/1:15,1:14:13.67:14,0,180	0/1:11,1:12:28.64:29,0,41	0/0:2,0:2:3.01:0,3,47
chr10	73520136	.	ACACTAAGCTCATATTAAGACCT	A	304.36	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.913;DP=524;FS=5.445;HRun=0;HaplotypeScore=285.5787;InbreedingCoeff=0.9066;MQ=93.99;MQ0=0;MQRankSum=-2.704;QD=21.74;ReadPosRankSum=-0.169;VQSLOD=1.5387;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,5:14:9.03:388,9,0	0/0:9,0:9:27.09:0,27,2336	0/0:32,0:32:72.25:0,72,4973	0/0:25,0:25:45.09:0,45,2031	0/0:25,0:25:66.22:0,66,5847	0/0:20,0:20:54.18:0,54,4637	0/0:15,0:15:45.15:0,45,3142	0/0:31,0:31:66.23:0,66,4048	0/0:21,0:21:57.20:0,57,5492	0/0:31,0:31:81.28:0,81,7122	0/0:11,0:11:33.10:0,33,3062	0/0:23,0:23:69.24:0,69,5891	0/0:15,0:15:42.14:0,42,3533	0/0:22,0:22:63.22:0,63,5525	0/0:14,0:14:33.11:0,33,2489	0/0:22,0:21:60.21:0,60,5040	0/0:25,0:25:66.23:0,66,5949	0/0:13,0:13:30.10:0,30,3011	0/0:13,0:13:33.11:0,33,2314	0/0:19,0:19:48.16:0,48,4736	0/0:24,0:24:72.25:0,72,6901	0/0:16,0:16:48.16:0,48,4319	0/0:18,0:18:48.16:0,48,4292	0/0:15,0:15:39.13:0,39,3623	0/0:14,0:14:42.14:0,42,2830	0/0:22,0:22:60.21:0,60,5581	0/0:11,0:11:30.10:0,30,3063	0/0:4,0:4:12:0,12,945
chr10	73520609	.	CCA	C	715.10	PASS	AB=0.918;AC=26;AF=0.542;AN=48;BaseQRankSum=2.751;DP=495;FS=1.945;HRun=0;HaplotypeScore=67.6287;InbreedingCoeff=0.0186;MQ=61.77;MQ0=32;MQRankSum=0.159;QD=2.48;ReadPosRankSum=1.479;VQSLOD=1.7379;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:0:0,0,0	0/0:6,0:6:2.84:0,3,14	./.	./.	0/0:13,0:13:2.72:0,3,36	0/0:13,0:14:12.03:0,12,157	0/1:30,0:28:8.79:9,0,77	./.	0/0:17,0:16:12.03:0,12,157	0/1:15,3:17:37.26:71,0,37	0/1:12,0:13:29.04:64,0,29	1/1:17,1:17:6.01:62,6,0	1/1:7,0:8:2.84:14,3,0	0/1:8,1:9:25.70:26,0,38	1/1:10,5:13:9.02:95,9,0	0/1:11,1:13:46.58:47,0,134	0/1:21,1:22:43.94:44,0,116	1/1:7,0:12:2.84:14,3,0	./.	0/1:10,0:10:6.90:7,0,158	0/1:33,0:31:9.34:9,0,73	1/1:13,2:13:14.40:132,14,0	1/1:13,0:14:3:27,3,0	1/1:28,4:29:19.86:159,20,0	1/1:5,2:6:3.01:32,3,0	0/0:18,0:16:5.35:0,5,62	0/1:2,2:4:33.52:53,0,34	0/0:11,0:11:9.51:0,10,129
chr10	73520711	.	A	AGAGAGG	1878.95	PASS	AB=0.800;AC=19;AF=0.352;AN=54;BaseQRankSum=8.563;DP=479;FS=2.706;HRun=0;HaplotypeScore=113.3886;InbreedingCoeff=0.8369;MQ=59.34;MQ0=8;MQRankSum=-5.330;QD=13.62;ReadPosRankSum=-2.345;VQSLOD=2.6115;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:39.28:408,39,0	./.	0/0:34,0:21:53.13:0,53,591	0/0:53,0:24:45.55:0,46,537	0/0:18,0:17:24.02:0,24,316	0/0:16,0:16:29.91:0,30,412	0/0:19,0:17:35.73:0,36,444	0/0:25,0:19:54:0,54,488	0/0:19,0:18:10.96:0,11,274	1/1:14,0:14:37.64:332,38,0	1/1:12,0:12:20.97:192,21,0	1/1:3,5:11:7.27:201,7,0	1/1:4,9:14:9.91:192,10,0	0/0:11,0:11:29.17:0,29,300	0/0:18,0:18:42.09:0,42,785	0/0:14,0:14:36.11:0,36,733	0/0:25,0:25:62.98:0,63,910	1/1:11,0:11:28.79:283,29,0	0/0:11,0:11:14.84:0,15,301	0/0:7,0:6:12.02:0,12,167	0/0:27,0:27:53.55:0,54,642	1/1:3,0:12:5.97:66,6,0	1/1:5,0:13:3.01:48,3,0	0/1:12,2:14:18.64:124,0,19	1/1:14,0:14:26.78:231,27,0	0/0:15,0:14:17.03:0,17,402	0/0:13,0:12:24.04:0,24,365	0/0:15,0:15:35.96:0,36,366
chr10	73520830	.	C	CAAA	1778.61	PASS	AB=0.896;AC=22;AF=0.393;AN=56;BaseQRankSum=5.114;DP=410;FS=3.473;HRun=13;HaplotypeScore=72.8338;InbreedingCoeff=0.7291;MQ=56.72;MQ0=15;MQRankSum=-4.534;QD=10.52;ReadPosRankSum=-3.368;VQSLOD=-0.0221;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:23:38.82:246,39,0	0/0:7,0:8:5.60:0,6,135	0/1:4,0:6:3.15:3,0,23	0/0:11,0:6:6.38:0,6,72	0/0:12,0:10:14.61:0,15,153	0/0:15,0:16:38.93:0,39,388	0/0:20,0:20:41.92:0,42,436	0/0:29,0:25:22.03:0,22,410	0/0:17,0:16:23.65:0,24,243	1/1:5,9:13:27.04:374,27,0	1/1:7,7:14:17.98:247,18,0	1/1:8,0:8:3.01:40,3,0	1/1:9,0:13:6.02:82,6,0	0/0:3,0:4:8.91:0,9,82	0/0:12,0:11:23.87:0,24,258	0/0:10,0:11:4.49:0,4,182	0/0:27,0:29:41.03:0,41,464	1/1:5,11:18:21.03:300,21,0	0/0:17,0:18:44.64:0,45,426	0/0:6,0:7:5.60:0,6,64	0/0:14,0:16:20.89:0,21,252	1/1:12,0:11:15.03:176,15,0	1/1:10,0:11:14.96:192,15,0	1/1:11,0:10:12.51:163,13,0	1/1:4,6:9:8.99:127,9,0	0/1:19,0:20:30.02:30,0,225	0/0:17,0:18:38.58:0,39,404	0/0:7,0:6:8.93:0,9,97
chr10	73520841	.	A	AAAAAG	2058.82	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=4.427;DP=425;FS=9.784;HRun=0;HaplotypeScore=101.3843;InbreedingCoeff=0.5076;MQ=68.72;MQ0=8;MQRankSum=-6.989;QD=14.20;ReadPosRankSum=-2.272;VQSLOD=2.0307;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:22:25.25:351,0,25	0/0:12,0:11:17.90:0,18,289	0/0:13,0:11:17.56:0,18,144	0/0:16,0:11:24.13:0,24,250	0/0:12,0:11:23.72:0,24,342	0/0:17,0:17:45.10:0,45,724	0/0:18,0:18:48.11:0,48,781	0/0:30,0:27:48.22:0,48,926	0/0:14,0:14:32.77:0,33,492	0/1:15,0:14:79.68:80,0,97	0/1:17,0:16:70.19:70,0,96	1/1:3,4:10:8.94:125,9,0	1/1:12,0:12:29.76:322,30,0	0/0:6,0:6:15:0,15,200	0/0:12,0:11:23.94:0,24,428	0/0:14,0:13:13.61:0,14,378	0/0:27,0:27:36:0,36,820	0/1:18,0:18:48.69:58,0,49	0/0:23,0:23:63.05:0,63,878	0/0:8,0:8:11.72:0,12,158	0/0:19,0:19:41.92:0,42,569	1/1:2,8:14:24.37:375,24,0	1/1:6,6:15:20.61:416,21,0	1/1:7,4:10:21.42:405,21,0	0/1:8,0:7:15.39:40,0,15	0/0:18,0:17:11.17:0,11,499	0/0:17,0:17:38.84:0,39,680	0/0:4,0:4:9.01:0,9,160
chr10	73521026	.	C	CTTCT	5967.82	PASS	AB=0.837;AC=32;AF=0.593;AN=54;BaseQRankSum=-9.189;DP=564;FS=0.000;HRun=0;HaplotypeScore=93.4856;InbreedingCoeff=0.7469;MQ=55.68;MQ0=9;MQRankSum=1.734;QD=17.05;ReadPosRankSum=-2.137;VQSLOD=3.7141;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:34:21.02:0,21,195	1/1:6,0:6:9.03:131,9,0	./.	0/1:20,0:8:0:0,0,0	0/1:16,15:31:5.95:730,0,6	1/1:6,7:12:9.03:211,9,0	1/1:15,8:23:9.03:211,9,0	1/1:32,0:29:8.97:105,9,0	1/1:9,0:14:11.99:176,12,0	0/0:8,0:13:6.01:0,6,56	0/0:4,0:10:14.69:0,15,123	0/0:5,0:15:23.96:0,24,224	0/0:10,0:18:21.02:0,21,195	1/1:9,10:19:30.10:678,30,0	1/1:8,5:13:12.04:277,12,0	1/1:5,3:8:3.01:70,3,0	1/1:11,0:20:12.04:209,12,0	0/0:13,0:30:27.03:0,27,252	1/1:22,1:20:3.01:70,3,0	1/1:11,9:20:27.09:631,27,0	1/1:1,10:11:15.05:352,15,0	0/0:11,0:21:21.74:0,22,197	0/0:8,0:11:3:0,3,28	0/0:12,0:25:13.53:0,14,260	0/0:10,0:14:9.01:0,9,84	1/1:15,14:28:39.08:794,39,0	1/1:13,19:31:48.16:1112,48,0	1/1:23,12:34:9.03:211,9,0
chr10	73521704	.	CT	C	1317.59	PASS	AB=0.938;AC=11;AF=0.196;AN=56;BaseQRankSum=3.789;DP=597;FS=0.938;HRun=12;HaplotypeScore=67.4448;InbreedingCoeff=0.8388;MQ=61.28;MQ0=8;MQRankSum=1.240;QD=11.46;ReadPosRankSum=1.508;VQSLOD=3.4105;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:46:79.70:0,80,408	0/0:16,1:17:21.85:0,22,403	0/0:19,0:13:26.66:0,27,238	0/0:8,0:6:9.49:0,9,89	0/0:22,0:22:48.08:0,48,480	0/0:19,2:21:0.73:0,1,336	0/0:19,0:23:47.12:0,47,495	0/0:26,0:26:44.92:0,45,439	0/0:15,0:14:36.05:0,36,356	0/0:14,1:30:19.96:0,20,191	0/0:4,0:16:28.85:0,29,163	1/1:8,14:23:9.70:245,10,0	1/1:5,12:17:20.88:162,21,0	0/0:10,0:10:24.05:0,24,243	0/0:22,0:23:35.93:0,36,491	0/0:19,0:19:36.79:0,37,329	0/0:26,3:30:7.13:0,7,560	0/0:18,0:17:22.04:0,22,403	0/0:29,0:30:62.80:0,63,607	0/0:25,2:27:39.71:0,40,564	0/0:12,0:13:35.87:0,36,338	1/1:1,17:18:44.82:347,45,0	1/1:4,11:15:40.65:305,41,0	1/1:7,20:26:56.15:426,56,0	0/1:2,1:15:0.02:0,0,96	0/0:30,0:30:69.08:0,69,683	0/0:22,1:22:10.13:0,10,428	0/0:11,0:11:30.02:0,30,283
chr10	73523349	.	A	AT	2370.16	PASS	AB=0.933;AC=11;AF=0.196;AN=56;BaseQRankSum=-10.188;DP=540;FS=20.385;HRun=7;HaplotypeScore=53.0319;InbreedingCoeff=0.9330;MQ=75.07;MQ0=0;MQRankSum=-1.161;QD=23.70;ReadPosRankSum=0.755;VQSLOD=1.9941;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.10:0,75,717	0/0:7,0:7:18.02:0,18,169	0/0:18,0:18:38.93:0,39,348	0/0:6,0:6:15.01:0,15,137	0/0:28,0:28:69.08:0,69,660	0/0:24,0:24:63.08:0,63,603	0/0:22,0:22:54.06:0,54,516	0/0:25,0:25:60.04:0,60,570	0/0:16,0:16:39.06:0,39,377	0/0:28,0:28:72.10:0,72,695	0/0:15,0:15:42.05:0,42,399	1/1:1,21:22:57.17:689,57,0	1/1:0,16:16:48.15:579,48,0	0/0:17,0:17:48.08:0,48,464	0/0:25,0:25:69.11:0,69,666	0/0:24,0:24:69.11:0,69,666	0/0:15,0:15:33.05:0,33,319	0/0:11,0:11:33.05:0,33,319	0/1:13,1:14:0.22:0,0,274	0/0:20,0:20:51.08:0,51,493	0/0:29,0:29:75.06:0,75,705	1/1:0,12:12:33.10:399,33,0	1/1:3,9:12:21.06:254,21,0	1/1:3,20:23:28.20:623,28,0	0/0:14,0:14:36.06:0,36,348	0/0:28,0:28:78.11:0,78,749	0/0:30,0:30:81.12:0,81,777	0/0:10,0:10:24.04:0,24,232
chr10	73523505	.	GA	G	1459.86	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.875;DP=431;FS=0.000;HRun=2;HaplotypeScore=47.0252;InbreedingCoeff=0.9804;MQ=79.87;MQ0=0;MQRankSum=-3.394;QD=32.44;ReadPosRankSum=1.602;VQSLOD=3.2092;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:39.04:0,39,583	0/0:7,0:7:21.07:0,21,315	0/0:15,0:15:45.12:0,45,625	0/0:16,0:16:38.57:0,39,601	0/0:23,0:23:69.20:0,69,990	0/0:15,0:15:45.15:0,45,674	0/0:20,0:20:60.16:0,60,873	0/0:21,0:21:57.19:0,57,853	0/0:6,0:6:18.06:0,18,270	0/0:22,0:22:66.22:0,66,973	0/0:20,0:20:54.18:0,54,799	1/1:0,11:11:30.10:389,30,0	1/1:0,8:8:24.08:311,24,0	0/0:11,0:11:33.11:0,33,495	0/0:21,0:21:63.21:0,63,944	0/0:12,0:12:36.12:0,36,540	0/0:29,0:29:84.22:0,84,1193	0/0:15,0:15:42.06:0,42,601	0/0:14,0:14:42.14:0,42,613	0/0:21,0:21:63.21:0,63,933	0/0:24,0:24:72.24:0,72,1079	1/1:0,3:3:9.03:117,9,0	1/1:0,14:14:39.13:506,39,0	1/1:0,9:9:24.08:308,24,0	0/0:13,0:13:36.11:0,36,504	0/0:18,0:18:51.17:0,51,745	0/0:20,0:20:60.20:0,60,899	0/0:7,0:7:18.06:0,18,270
chr10	73524654	.	GA	G	134.25	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.366;DP=348;FS=8.275;HRun=10;HaplotypeScore=39.2477;InbreedingCoeff=0.4035;MQ=63.43;MQ0=14;MQRankSum=0.349;QD=12.20;ReadPosRankSum=0.873;VQSLOD=2.0454;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:26.95:227,27,0	0/0:6,0:6:12.01:0,12,121	0/0:22,0:8:14.99:0,15,140	0/0:36,0:17:6.71:0,7,112	0/0:17,0:17:39.10:0,39,429	0/0:6,0:6:15.03:0,15,158	0/0:8,0:8:21:0,21,211	0/0:21,2:23:22.65:0,23,583	0/0:3,0:3:3.01:0,3,33	0/0:12,0:12:18.05:0,18,199	0/0:17,0:17:36.10:0,36,398	0/0:4,0:4:3.01:0,3,33	0/0:2,0:2:6.02:0,6,66	0/0:6,0:6:15.04:0,15,166	0/0:9,0:8:3.01:0,3,33	0/0:8,0:8:12.03:0,12,131	0/0:33,0:31:81.22:0,81,892	0/0:34,0:32:77.66:0,78,780	0/0:11,0:8:18.05:0,18,198	0/0:12,0:12:27.07:0,27,296	0/0:9,0:9:15.04:0,15,166	0/0:6,0:4:3.01:0,3,33	0/0:5,0:5:5.91:0,6,50	0/0:5,0:5:6.02:0,6,66	0/0:11,0:11:30.07:0,30,325	0/0:11,0:11:18.93:0,19,195	0/0:11,0:12:23.89:0,24,244	0/0:9,0:6:18.05:0,18,198
chr10	73525521	.	AAGAATATATATATATATATATATATATAT	A	5460.66	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=7.237;DP=210;FS=17.421;HRun=0;HaplotypeScore=118.8589;InbreedingCoeff=0.6671;MQ=63.18;MQ0=1;MQRankSum=-5.904;QD=63.50;ReadPosRankSum=5.362;VQSLOD=2.6397;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:30.10:0,30,1434	0/0:1,0:1:3.01:0,3,219	0/0:8,0:5:9.07:0,9,82	0/0:18,0:6:15.52:0,16,326	0/0:4,0:4:12.03:0,12,528	./.	0/0:3,0:3:9:0,9,458	0/0:16,0:16:39.13:0,39,2313	0/0:4,0:4:12.02:0,12,588	0/0:3,0:3:9.03:0,9,333	0/0:4,0:4:8.95:0,9,301	1/1:0,20:20:18.06:1406,18,0	1/1:0,11:11:15.05:1172,15,0	0/0:1,0:1:3.01:0,3,366	0/0:2,0:2:6.02:0,6,413	0/0:2,0:2:3.01:0,3,51	0/0:21,0:21:57.11:0,57,4948	0/0:2,0:2:5.93:0,6,58	0/0:4,0:4:12.03:0,12,553	0/0:8,0:8:24.07:0,24,757	./.	1/1:2,23:25:27.05:1778,27,0	1/1:0,15:15:12.04:870,12,0	1/1:0,15:15:3.01:234,3,0	0/0:4,0:4:8.95:0,9,224	0/0:5,0:5:12.03:0,12,240	0/0:3,0:3:9.03:0,9,374	0/0:1,0:1:3.01:0,3,389
chr10	73525524	.	A	AAT	404.71	PASS	AB=0.850;AC=11;AF=0.344;AN=32;BaseQRankSum=-4.143;DP=202;FS=0.000;HRun=0;HaplotypeScore=53.3787;InbreedingCoeff=0.2583;MQ=57.84;MQ0=1;MQRankSum=3.323;QD=6.23;ReadPosRankSum=-1.596;VQSLOD=1.9049;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:6,0:3:0:0,0,0	0/1:20,0:6:0.27:0,0,0	./.	./.	0/0:1,0:1:3.01:0,3,34	0/1:14,3:17:17:82,0,17	0/0:3,0:3:3.01:0,3,33	./.	./.	0/0:20,0:20:17.04:0,17,84	0/0:11,0:11:14.20:0,14,70	1/1:1,0:1:2.99:24,3,0	1/1:2,0:2:3:25,3,0	./.	0/1:12,7:21:36.94:315,0,37	1/1:3,0:3:3.01:39,3,0	0/0:2,0:3:2.84:0,3,14	./.	./.	0/0:23,0:23:14.20:0,14,70	0/0:15,0:15:5.68:0,6,28	0/0:15,0:15:2.84:0,3,14	./.	./.	./.	1/1:0,0:1:3:26,3,0
chr10	73525886	.	TG	T	1600.71	PASS	AB=0.899;AC=28;AF=0.500;AN=56;BaseQRankSum=0.073;DP=410;FS=0.499;HRun=11;HaplotypeScore=54.7251;InbreedingCoeff=0.1365;MQ=85.31;MQ0=1;MQRankSum=1.382;QD=5.18;ReadPosRankSum=4.190;VQSLOD=0.7253;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,11:16:0.98:214,1,0	0/0:4,0:4:6:0,6,56	0/1:23,1:19:4.29:4,0,123	0/0:25,0:20:22.44:0,22,121	0/0:16,1:17:8.19:0,8,253	0/0:16,0:16:8:0,8,203	0/0:10,0:10:18:0,18,173	0/1:15,2:17:25.14:25,0,79	0/0:10,0:10:6.28:0,6,221	0/1:11,0:11:7.89:8,0,113	0/1:11,0:11:6.50:7,0,132	1/1:7,9:17:25.99:203,26,0	1/1:3,7:10:14.97:123,15,0	0/0:9,0:9:18.05:0,18,191	0/1:5,2:7:34.31:34,0,65	0/1:7,2:9:41.16:41,0,78	0/1:30,2:32:54.64:55,0,412	1/1:6,14:21:38.88:304,39,0	0/1:11,2:13:25.28:25,0,144	1/1:11,7:18:23.92:191,24,0	0/1:13,1:14:0.64:1,0,173	1/1:5,6:11:14.97:123,15,0	1/1:7,5:12:11.99:98,12,0	1/1:4,12:17:32:252,32,0	0/1:12,0:12:6.59:7,0,135	0/1:10,4:14:48.86:49,0,111	0/1:18,5:22:18.37:18,0,236	0/0:8,0:8:11.90:0,12,111
chr10	73527737	.	A	AAG	469.80	PASS	AB=0.949;AC=18;AF=0.321;AN=56;BaseQRankSum=2.553;DP=296;FS=2.600;HRun=0;HaplotypeScore=57.5518;InbreedingCoeff=0.4077;MQ=76.63;MQ0=14;MQRankSum=-1.559;QD=8.24;ReadPosRankSum=-2.084;VQSLOD=2.8564;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:16:32.11:32,0,70	0/1:2,0:3:13.70:19,0,14	0/0:69,0:23:31.76:0,32,264	0/0:63,0:25:12.29:0,12,146	0/0:4,0:4:6.43:0,6,61	0/0:5,0:5:14.92:0,15,146	0/0:5,0:5:11.96:0,12,125	0/0:5,0:5:8.83:0,9,105	0/0:6,0:6:18:0,18,203	1/1:4,0:4:1.46:26,1,0	1/1:4,0:4:5.17:21,5,0	1/1:0,5:7:17.42:261,17,0	1/1:0,2:3:6.02:106,6,0	0/1:5,0:5:2.84:3,0,110	0/0:6,0:6:17.98:0,18,190	0/0:3,0:3:9.03:0,9,124	0/0:27,0:26:54.34:0,54,797	0/0:11,0:11:5.92:0,6,60	0/0:4,0:4:12:0,12,129	0/0:4,0:4:8.94:0,9,96	0/0:9,0:9:27:0,27,329	0/1:1,0:1:0:0,0,0	1/1:1,1:4:8.39:91,8,0	1/1:0,1:1:3.01:54,3,0	0/1:5,0:5:13.09:13,0,21	0/0:5,0:5:14.61:0,15,157	0/0:9,0:9:27.06:0,27,345	0/1:4,0:4:6.92:7,0,53
chr10	73529129	.	C	CGCGCGCGCGT	1654.93	PASS	AB=0.917;AC=13;AF=0.232;AN=56;BaseQRankSum=4.189;DP=348;FS=4.894;HRun=0;HaplotypeScore=130.0635;InbreedingCoeff=0.2948;MQ=67.75;MQ0=5;MQRankSum=-2.136;QD=15.47;ReadPosRankSum=-1.198;VQSLOD=2.2029;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:0.38:27,0,0	0/0:1,0:1:3.01:0,3,95	0/0:11,0:8:9.03:0,9,197	0/0:12,0:10:0:0,0,173	0/0:17,0:17:30.10:0,30,900	0/0:24,0:24:59.99:0,60,1749	0/0:19,0:19:39.12:0,39,1075	0/0:19,0:16:22.89:0,23,580	0/0:6,0:6:12.04:0,12,370	1/1:1,2:4:9.03:339,9,0	1/1:4,1:5:2.83:153,3,0	0/0:8,0:8:5.54:0,6,118	0/1:5,0:5:21.62:22,0,41	0/0:6,0:6:11.40:0,11,365	0/0:6,0:6:12.04:0,12,213	0/0:3,0:3:8.94:0,9,135	0/0:37,0:36:40.99:0,41,1197	1/1:13,4:17:23.82:875,24,0	0/0:14,0:13:23.11:0,23,592	0/0:10,0:10:18.06:0,18,569	0/0:26,0:26:63.04:0,63,1582	0/1:5,0:5:11.67:12,0,15	0/1:12,0:12:27.38:51,0,27	0/1:28,0:28:32.89:33,0,109	0/1:2,3:6:8.01:298,0,8	0/0:8,0:8:21.07:0,21,596	0/0:8,0:8:18.06:0,18,458	0/0:6,0:6:8.88:0,9,227
chr10	73529138	.	GCA	G	547.98	PASS	AB=0.917;AC=21;AF=0.404;AN=52;BaseQRankSum=2.640;DP=324;FS=10.358;HRun=0;HaplotypeScore=73.9986;InbreedingCoeff=-0.1322;MQ=63.76;MQ0=7;MQRankSum=0.986;QD=2.14;ReadPosRankSum=0.800;VQSLOD=0.7185;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:26:0.26:0,0,0	0/0:1,0:1:3.01:0,3,45	./.	0/0:12,0:8:2.74:0,3,12	0/1:14,1:16:32.28:32,0,223	0/1:23,1:25:2.56:3,0,465	0/1:19,1:20:59.73:60,0,195	0/1:17,0:13:14.88:15,0,79	0/1:4,2:6:21.34:21,0,124	0/0:5,0:5:9.02:0,9,95	0/0:4,0:4:3.01:0,3,32	1/1:3,0:6:8.28:38,8,0	0/1:3,0:4:8.12:8,0,28	0/1:7,1:8:15.92:45,0,16	0/0:4,0:4:3.01:0,3,45	0/0:3,0:3:9.03:0,9,131	1/1:10,20:31:22.85:227,23,0	0/0:10,0:10:20.35:0,20,142	0/1:8,2:9:51.71:52,0,121	0/0:9,0:9:18.03:0,18,230	0/1:24,1:25:47.62:48,0,227	./.	1/1:8,0:11:2.84:14,3,0	1/1:13,0:21:8.51:42,9,0	0/1:7,0:6:11.73:12,0,57	0/1:11,1:12:34.50:35,0,188	0/1:10,0:10:46.88:47,0,180	0/0:7,0:7:0.82:0,1,135
chr10	73529202	.	CT	C	512.93	PASS	AB=0.880;AC=16;AF=0.286;AN=56;BaseQRankSum=0.414;DP=444;FS=2.856;HRun=14;HaplotypeScore=75.1216;InbreedingCoeff=-0.0116;MQ=54.77;MQ0=14;MQRankSum=0.101;QD=2.49;ReadPosRankSum=2.975;VQSLOD=-0.4333;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:13,3:15:20.39:103,0,20	0/0:4,0:4:9.01:0,9,81	0/1:33,0:13:12.06:12,0,60	0/0:20,0:7:2.01:0,2,23	0/0:27,1:28:48.39:0,48,361	0/0:16,0:16:17.17:0,17,202	0/1:11,1:10:10.17:10,0,82	0/0:26,0:26:36.15:0,36,321	0/0:8,0:9:14.29:0,14,93	0/0:11,0:12:29.69:0,30,240	0/1:9,1:10:2.61:3,0,112	0/1:9,1:8:14.60:41,0,15	0/1:2,5:7:16.21:35,0,16	0/0:14,0:14:26.03:0,26,221	0/1:7,0:7:5.72:6,0,72	0/0:7,0:7:12.01:0,12,111	0/0:34,1:33:33.03:0,33,395	0/0:17,0:20:35.10:0,35,208	0/1:26,1:26:2.40:2,0,260	0/0:20,0:20:38.69:0,39,341	0/1:15,1:16:31.61:32,0,68	1/1:4,5:9:20.70:139,21,0	0/1:7,5:12:23.76:90,0,24	1/1:10,5:15:26.19:177,26,0	0/1:8,1:9:2.57:3,0,119	0/1:20,3:23:18.19:18,0,235	0/0:21,0:20:46.40:0,46,351	0/0:5,0:5:5.91:0,6,44
chr10	73529380	.	A	AT	488.09	PASS	AB=0.958;AC=4;AF=0.071;AN=56;BaseQRankSum=-1.850;DP=484;FS=0.743;HRun=10;HaplotypeScore=56.0932;InbreedingCoeff=0.4428;MQ=78.94;MQ0=0;MQRankSum=-0.953;QD=8.27;ReadPosRankSum=-1.185;VQSLOD=1.5398;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:58.45:0,58,683	0/0:6,0:6:11.03:0,11,80	0/1:24,0:21:20.61:21,0,193	0/0:20,0:20:31.83:0,32,214	0/0:24,0:24:65.86:0,66,535	0/0:19,0:19:28.39:0,28,393	0/0:18,0:20:55.01:0,55,431	0/0:24,0:24:39.77:0,40,319	0/1:10,1:11:2.03:2,0,192	0/0:20,0:20:53.91:0,54,442	0/0:8,0:8:23.96:0,24,194	0/0:14,0:14:35.95:0,36,296	0/0:10,0:10:26.95:0,27,222	0/0:12,0:12:32.93:0,33,268	0/0:14,0:14:35.95:0,36,296	0/0:15,0:15:26.92:0,27,222	0/0:28,0:28:74.91:0,75,615	1/1:4,18:24:56.81:572,57,0	0/0:26,0:26:62.91:0,63,517	0/0:17,0:17:44.93:0,45,369	0/0:4,0:4:8.99:0,9,74	0/0:10,0:10:29.96:0,30,246	0/0:15,0:16:46.99:0,47,375	0/0:27,1:28:36.71:0,37,510	0/0:13,0:13:38.96:0,39,320	0/0:19,0:19:47.94:0,48,394	0/0:19,0:19:53.92:0,54,443	0/0:1,0:1:3:0,3,25
chr10	73529819	.	GA	G	1399.83	PASS	AB=0.929;AC=12;AF=0.214;AN=56;BaseQRankSum=5.788;DP=607;FS=6.817;HRun=11;HaplotypeScore=75.4204;InbreedingCoeff=0.7632;MQ=75.92;MQ0=0;MQRankSum=0.140;QD=10.69;ReadPosRankSum=3.294;VQSLOD=3.0104;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:53.42:0,53,523	0/0:16,0:16:45.11:0,45,480	0/0:20,0:20:2.89:0,3,300	0/1:14,0:14:9.34:9,0,166	0/0:24,0:24:54.09:0,54,543	0/0:24,0:24:60.15:0,60,640	0/0:18,1:19:29.48:0,29,505	0/0:25,0:25:54.10:0,54,553	0/0:25,0:25:63.14:0,63,664	0/0:6,0:24:57.51:0,58,345	0/0:4,0:26:60.36:0,60,322	1/1:2,10:12:26.97:222,27,0	1/1:4,9:13:17.94:148,18,0	0/0:23,1:25:41.33:0,41,603	0/0:16,0:16:39.09:0,39,410	0/0:21,0:22:56.98:0,57,590	0/0:21,0:21:54.10:0,54,563	0/0:3,0:14:31.38:0,31,163	0/1:18,4:24:39.11:39,0,383	0/0:41,1:41:86.54:0,87,1067	0/0:28,0:28:69.65:0,70,737	1/1:8,20:28:23.94:392,24,0	1/1:3,16:19:38.70:320,39,0	1/1:0,20:21:55.98:449,56,0	0/0:2,0:19:25.67:0,26,129	0/0:24,0:24:57.07:0,57,588	0/0:21,0:21:54.12:0,54,562	0/0:16,0:16:38.59:0,39,408
chr10	73529850	.	C	CA	686.63	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.224;DP=590;FS=1.833;HRun=6;HaplotypeScore=68.3702;InbreedingCoeff=0.9979;MQ=76.78;MQ0=0;MQRankSum=-2.526;QD=25.43;ReadPosRankSum=2.272;VQSLOD=3.8141;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:27:54.98:782,55,0	0/0:13,0:13:36.05:0,36,358	0/0:19,0:19:42.10:0,42,429	0/0:10,0:10:27.03:0,27,265	0/0:25,0:25:72.16:0,72,735	0/0:26,0:26:72.16:0,72,735	0/0:24,0:24:54.12:0,54,551	0/0:25,0:25:63.14:0,63,643	0/0:24,0:24:69.15:0,69,704	0/0:21,0:21:60.12:0,60,604	0/0:23,0:23:63.14:0,63,642	0/0:15,0:15:39.07:0,39,391	0/0:12,0:12:33.06:0,33,326	0/0:21,0:21:57.11:0,57,574	0/0:13,0:13:33.07:0,33,337	0/0:18,0:18:42.09:0,42,429	0/0:21,0:21:63.14:0,63,643	0/0:21,0:21:54.09:0,54,542	0/0:19,0:19:54.12:0,54,550	0/0:40,0:39:99:0,111,1126	0/0:22,0:22:63.13:0,63,635	0/0:23,0:23:69.16:0,69,704	0/0:23,0:23:63.13:0,63,636	0/0:24,0:24:60.12:0,60,604	0/0:18,0:18:39.09:0,39,398	0/0:32,0:32:87.19:0,87,887	0/0:20,0:20:57.13:0,57,582	0/0:11,0:11:33.08:0,33,337
chr10	73530599	.	T	TC	879.96	PASS	AB=0.636;AC=9;AF=0.161;AN=56;BaseQRankSum=3.645;DP=447;FS=7.234;HRun=0;HaplotypeScore=85.1051;InbreedingCoeff=0.7567;MQ=62.16;MQ0=19;MQRankSum=-1.372;QD=14.91;ReadPosRankSum=1.636;VQSLOD=5.3198;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:50.55:0,51,372	0/0:5,0:5:15.01:0,15,187	0/0:41,0:12:22.36:0,22,217	0/0:34,0:16:11.68:0,12,187	0/0:18,0:17:42.10:0,42,564	0/0:13,0:13:27.08:0,27,360	0/0:14,0:13:27.04:0,27,344	0/0:12,0:12:35.45:0,35,397	0/0:12,0:12:31.56:0,32,345	0/0:14,0:14:35.05:0,35,203	0/0:11,0:10:20.81:0,21,147	1/1:4,7:12:4.13:244,4,0	1/1:5,10:14:4.67:227,5,0	0/0:16,0:16:45:0,45,504	0/0:15,0:15:23.72:0,24,174	0/0:14,0:13:27.53:0,28,317	0/0:25,0:22:52.59:0,53,556	0/0:14,0:13:26.72:0,27,185	0/0:11,0:9:27.05:0,27,355	0/0:17,0:16:46.25:0,46,505	0/0:19,0:19:39.45:0,39,406	1/1:1,9:9:20.37:232,20,0	1/1:3,5:7:9.22:174,9,0	0/1:6,8:11:16.82:148,0,17	0/0:13,0:13:32.27:0,32,210	0/0:13,0:13:33.35:0,33,402	0/0:14,0:14:32.89:0,33,394	0/0:15,0:14:41.19:0,41,497
chr10	73531539	.	ATTTG	A	7944.01	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=16.261;DP=665;FS=2.001;HRun=0;HaplotypeScore=114.9921;InbreedingCoeff=0.9995;MQ=82.53;MQ0=0;MQRankSum=-6.052;QD=41.59;ReadPosRankSum=3.988;VQSLOD=5.4357;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.26:0,75,1976	0/0:13,0:13:33.10:0,33,819	0/0:32,0:32:93.29:0,93,2257	0/0:13,0:13:30.10:0,30,763	0/0:36,0:36:99:0,99,2586	0/0:24,0:24:69.24:0,69,1810	0/0:18,0:18:54.15:0,54,1363	0/0:35,0:35:96.32:0,96,2415	0/0:30,0:30:90.30:0,90,2229	1/1:2,34:36:99:1876,102,0	1/1:3,18:22:42.14:772,42,0	1/1:3,16:19:36.12:662,36,0	1/1:2,18:20:45.15:827,45,0	0/0:25,0:25:69.24:0,69,1806	0/0:29,0:29:81.28:0,81,2116	0/0:21,0:21:57.20:0,57,1506	0/0:22,0:22:57.20:0,57,1506	1/1:0,10:10:27.09:496,27,0	0/0:26,0:25:63.22:0,63,1664	0/0:27,0:27:69.24:0,69,1814	0/0:19,0:19:57.18:0,57,1442	1/1:3,27:30:69.24:1269,69,0	1/1:2,13:15:33.11:607,33,0	1/1:3,23:26:48.64:883,49,0	1/1:1,12:13:30.10:552,30,0	0/0:34,0:34:99:0,99,2604	0/0:32,0:31:93.32:0,93,2427	0/0:11,0:11:33.11:0,33,870
chr10	73531786	.	C	CTCTTTCTT	3523.03	PASS	AB=0.600;AC=21;AF=0.404;AN=52;BaseQRankSum=5.352;DP=660;FS=6.394;HRun=0;HaplotypeScore=153.8932;InbreedingCoeff=0.8756;MQ=58.57;MQ0=4;MQRankSum=-0.653;QD=11.82;ReadPosRankSum=-1.390;VQSLOD=1.4734;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:18.05:482,18,0	1/1:10,1:20:23.98:324,24,0	./.	./.	0/0:31,0:31:4:0,4,997	0/0:24,0:24:36.05:0,36,788	0/0:29,0:29:35.40:0,35,758	1/1:42,0:40:17.95:184,18,0	0/0:20,0:21:39.09:0,39,740	1/1:20,0:32:32.93:296,33,0	1/1:10,10:26:32.93:692,33,0	1/1:12,0:24:11.94:93,12,0	1/1:12,13:25:18.06:732,18,0	0/0:18,0:18:33.11:0,33,790	0/0:23,0:23:36.08:0,36,678	0/0:18,0:18:21.07:0,21,492	1/1:18,0:31:11.98:98,12,0	0/0:9,0:18:20.86:0,21,349	0/0:21,0:20:18.06:0,18,427	0/0:25,0:25:24.08:0,24,559	0/0:25,0:25:33.10:0,33,720	1/1:7,0:23:44.68:339,45,0	0/0:20,0:20:42.14:0,42,952	0/1:8,0:24:25.87:190,0,26	1/1:13,0:20:11.96:94,12,0	0/0:24,0:24:30.10:0,30,741	0/0:28,0:28:39.06:0,39,816	0/0:12,0:12:21.07:0,21,522
chr10	73531828	.	C	CTTTCTTTT	2161.01	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=8.305;DP=561;FS=8.432;HRun=0;HaplotypeScore=134.8858;InbreedingCoeff=-0.0483;MQ=60.56;MQ0=1;MQRankSum=-1.225;QD=9.27;ReadPosRankSum=-0.150;VQSLOD=1.8267;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:25:18.06:602,18,0	0/1:16,0:16:88.55:183,0,89	0/0:14,0:12:15.77:0,16,197	0/0:16,0:15:12.79:0,13,221	0/0:28,0:28:55.60:0,56,1523	0/0:23,0:23:62.77:0,63,1123	0/0:28,0:28:22.69:0,23,1102	0/1:27,0:26:59.36:59,0,363	0/0:21,0:21:62.18:0,62,1076	0/1:21,0:21:76.05:76,0,220	0/1:15,0:15:78.88:439,0,79	0/1:20,0:19:9.02:9,0,143	0/1:22,0:22:99:592,0,156	0/0:18,0:18:53.91:0,54,1122	0/0:18,0:18:53.97:0,54,926	0/0:12,0:12:35.98:0,36,718	0/1:25,0:24:5.29:5,0,167	0/0:16,0:15:35.87:0,36,560	0/0:24,0:23:61.98:0,62,856	0/0:15,0:15:41.91:0,42,776	0/0:23,0:23:65.99:0,66,1150	0/1:23,0:23:83.50:281,0,83	0/0:20,0:20:59.59:0,60,1226	0/1:24,0:24:58.23:58,0,170	0/1:14,0:14:9.17:9,0,124	0/0:22,0:22:65.94:0,66,1163	0/0:23,0:23:65.81:0,66,1175	0/0:7,0:7:21.07:0,21,625
chr10	73532223	.	CTG	C	183.72	PASS	AB=0.920;AC=9;AF=0.173;AN=52;BaseQRankSum=-0.705;DP=639;FS=2.867;HRun=0;HaplotypeScore=136.5250;InbreedingCoeff=-0.2366;MQ=50.39;MQ0=21;MQRankSum=1.012;QD=1.00;ReadPosRankSum=1.402;VQSLOD=2.7242;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:40:5.84:0,6,36	0/0:5,0:5:6.02:0,6,78	./.	./.	0/0:12,0:19:9.02:0,9,105	0/1:16,0:15:76.58:87,0,77	0/1:33,0:32:32.11:32,0,548	0/1:34,0:27:11.83:12,0,330	0/0:18,3:20:6.27:0,6,173	0/0:27,0:28:36.64:0,37,252	0/0:18,0:16:15.12:0,15,108	0/0:17,0:17:9.44:0,9,71	0/0:21,0:21:30.73:0,31,228	0/1:16,1:17:1.65:2,0,373	0/1:8,4:12:13.41:13,0,258	0/1:16,4:20:38.85:39,0,340	0/0:30,1:32:28.40:0,28,792	0/0:27,0:25:31.88:0,32,204	0/1:17,0:15:21.08:21,0,110	0/0:17,0:17:16.12:0,16,277	0/0:59,1:59:53.54:0,54,989	0/0:23,0:23:12.20:0,12,78	0/0:21,0:20:8.97:0,9,69	0/0:32,0:31:35.61:0,36,265	0/0:24,0:24:20.70:0,21,155	0/0:25,1:25:1.28:0,1,333	0/1:31,0:31:81.51:82,0,416	0/1:2,1:3:25.43:25,0,83
chr10	73532231	.	G	GTGTGTC	1728.74	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=6.738;DP=624;FS=0.417;HRun=0;HaplotypeScore=179.6111;InbreedingCoeff=0.4966;MQ=49.44;MQ0=23;MQRankSum=0.905;QD=6.78;ReadPosRankSum=2.303;VQSLOD=2.7195;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:41,5:44:25.72:504,26,0	0/0:4,0:4:12.01:0,12,135	0/0:3,0:2:5.85:0,6,46	0/0:10,0:3:5.62:0,6,27	0/0:18,0:17:14.69:0,15,182	0/0:17,0:17:37.95:0,38,400	0/0:32,0:31:74.69:0,75,1077	0/0:35,0:29:75.61:0,76,797	0/0:17,0:16:33.01:0,33,416	0/1:29,0:29:10.97:283,0,11	1/1:18,0:15:21.36:152,21,0	0/1:19,0:19:13.29:113,0,13	1/1:20,0:20:12.41:127,12,0	0/0:17,0:16:42.01:0,42,711	0/0:10,0:10:21.07:0,21,459	0/0:19,0:19:48.05:0,48,781	0/0:33,0:33:78.93:0,79,1346	0/1:25,0:23:68.84:187,0,69	0/0:19,0:16:35.51:0,36,347	0/0:16,0:16:36.04:0,36,550	0/0:60,0:59:95.66:0,96,1585	1/1:21,0:21:23:222,23,0	1/1:21,0:20:10.24:41,10,0	0/1:33,0:32:29.78:195,0,30	0/1:23,0:23:24.33:88,0,24	0/0:23,0:22:30.19:0,30,725	0/0:31,0:31:71.46:0,71,974	0/0:3,0:3:9.03:0,9,182
chr10	73532235	.	G	GTC	4938.88	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=3.962;DP=618;FS=3.442;HRun=0;HaplotypeScore=123.9798;InbreedingCoeff=0.7946;MQ=49.37;MQ0=24;MQRankSum=3.494;QD=18.57;ReadPosRankSum=0.294;VQSLOD=5.0892;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:47,0:45:96.80:274,0,97	0/0:4,0:4:12.01:0,12,128	0/0:3,0:2:5.85:0,6,46	0/0:8,0:2:5.67:0,6,27	0/1:18,0:17:3.23:3,0,144	0/0:18,0:17:37.82:0,38,320	0/0:33,0:32:77.96:0,78,896	0/0:39,0:32:85.12:0,85,810	0/0:17,0:16:35.86:0,36,378	1/1:19,8:27:12.27:825,12,0	1/1:13,4:14:26.94:316,27,0	1/1:10,8:18:27.02:350,27,0	1/1:4,14:18:47.83:697,48,0	0/0:17,0:16:44.22:0,44,510	0/0:10,0:10:21.04:0,21,296	0/0:19,0:19:47.99:0,48,552	0/0:35,0:35:68.31:0,68,1008	1/1:15,9:22:8.82:691,9,0	0/0:17,0:14:38.43:0,38,320	0/0:15,0:15:35.72:0,36,409	0/0:62,0:60:99:0,101,1292	1/1:13,6:19:30.02:371,30,0	1/1:6,15:20:7.48:171,7,0	1/1:21,13:33:37.06:785,37,0	1/1:12,11:23:15.10:457,15,0	0/0:22,0:21:33.16:0,33,612	0/0:29,0:29:71.73:0,72,777	0/0:4,0:4:9:0,9,113
chr10	73532267	.	CTG	C	2991.16	PASS	AB=0.848;AC=22;AF=0.407;AN=54;BaseQRankSum=12.440;DP=641;FS=5.545;HRun=0;HaplotypeScore=127.0985;InbreedingCoeff=0.6729;MQ=51.08;MQ0=19;MQRankSum=0.943;QD=9.71;ReadPosRankSum=2.957;VQSLOD=2.7273;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,44:53:89.77:1030,90,0	0/0:5,0:5:15.05:0,15,232	./.	0/0:31,0:12:12.96:0,13,248	0/0:16,0:13:15.05:0,15,231	0/1:18,2:20:2.43:2,0,439	0/1:28,4:31:19.18:19,0,617	0/0:34,0:32:38.06:0,38,512	0/0:21,0:20:36.10:0,36,525	1/1:10,12:23:27.62:400,28,0	1/1:5,8:12:12.04:141,12,0	1/1:9,10:19:11.66:140,12,0	1/1:8,10:18:27.04:301,27,0	0/0:21,0:20:45.09:0,45,640	0/0:13,0:13:21.03:0,21,282	0/0:21,0:21:39.08:0,39,561	0/0:38,0:38:81.21:0,81,1186	0/1:9,10:19:21.45:186,0,21	0/0:13,0:11:14.86:0,15,171	0/1:14,1:15:37.22:37,0,353	0/0:54,0:50:78.18:0,78,1101	1/1:6,12:19:21.06:246,21,0	1/1:14,2:15:8.86:84,9,0	1/1:14,23:36:38.81:431,39,0	1/1:7,14:22:14.99:176,15,0	0/0:17,1:18:9.96:0,10,580	0/0:19,3:22:13:0,13,650	0/0:7,0:7:11.97:0,12,160
chr10	73532995	.	AGTGTGTGT	A	2122.69	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=7.002;DP=747;FS=17.118;HRun=0;HaplotypeScore=191.7600;InbreedingCoeff=0.8779;MQ=56.83;MQ0=14;MQRankSum=-4.256;QD=15.72;ReadPosRankSum=1.529;VQSLOD=1.4328;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,3:39:20.60:366,21,0	0/0:11,0:11:21.54:0,22,676	0/0:36,0:18:0.47:0,0,1	./.	0/0:19,0:20:30.08:0,30,673	0/0:17,0:19:26.54:0,27,859	0/0:25,0:25:48.15:0,48,1246	0/0:39,0:37:36.55:0,37,803	0/0:24,0:25:19.64:0,20,900	1/1:18,13:31:39.08:823,39,0	1/1:6,9:16:18.06:445,18,0	0/0:28,0:28:18.06:0,18,601	0/0:21,0:20:5.45:0,5,175	0/0:11,0:22:17.99:0,18,630	0/0:22,0:20:18.06:0,18,559	0/0:26,0:27:45.15:0,45,1430	0/0:25,0:27:57.14:0,57,1740	1/1:17,1:18:5.87:91,6,0	0/0:29,0:27:21.07:0,21,583	0/0:17,0:19:21.07:0,21,686	0/0:46,0:46:63.19:0,63,1698	0/0:27,0:27:11.97:0,12,317	0/0:21,0:21:8.41:0,8,218	0/0:26,0:26:14.70:0,15,323	1/1:12,14:29:24.08:563,24,0	0/0:35,0:38:66.21:0,66,1798	0/0:26,0:26:36.12:0,36,1356	0/0:13,0:12:21:0,21,443
chr10	73533001	.	T	TGTGTGA	1105.57	PASS	AB=0.848;AC=9;AF=0.161;AN=56;BaseQRankSum=1.615;DP=764;FS=4.255;HRun=0;HaplotypeScore=184.1294;InbreedingCoeff=0.5655;MQ=54.26;MQ0=25;MQRankSum=-2.046;QD=7.37;ReadPosRankSum=2.906;VQSLOD=2.6870;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:65.79:0,66,569	0/0:12,0:12:29.36:0,29,285	0/0:37,0:16:18.76:0,19,225	0/0:47,0:16:39.06:0,39,398	0/0:19,0:19:44.09:0,44,384	0/0:18,0:18:32.53:0,33,446	0/0:26,0:26:70.96:0,71,769	0/0:40,0:38:99:0,103,833	0/0:26,0:25:57.42:0,57,526	0/0:33,0:32:89.65:0,90,873	0/0:16,0:16:32.77:0,33,350	1/1:3,25:31:18.06:555,18,0	0/1:21,0:20:15.99:136,0,16	0/0:21,0:21:32.19:0,32,232	0/0:24,0:22:6.60:0,7,320	0/0:25,0:25:58.74:0,59,666	0/0:31,0:30:80:0,80,1007	0/1:18,0:18:3.02:3,0,397	0/0:32,0:29:57.27:0,57,502	0/0:18,0:18:38.62:0,39,499	0/0:46,0:46:80.72:0,81,720	1/1:6,19:28:8.91:256,9,0	1/1:3,14:21:4.99:206,5,0	0/1:5,22:31:12.40:93,0,12	0/0:27,0:27:35.58:0,36,446	0/0:37,0:37:98.56:0,99,1003	0/0:22,0:22:57.02:0,57,828	0/0:16,0:15:41.79:0,42,433
chr10	73533005	.	T	TGA	404.09	PASS	AB=0.917;AC=8;AF=0.143;AN=56;BaseQRankSum=6.134;DP=769;FS=16.616;HRun=0;HaplotypeScore=133.3870;InbreedingCoeff=0.1501;MQ=52.61;MQ0=29;MQRankSum=-1.338;QD=2.35;ReadPosRankSum=3.215;VQSLOD=1.4387;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:43.52:0,44,451	0/0:12,0:12:29.57:0,30,277	0/0:35,0:13:19.73:0,20,226	0/0:49,0:14:39.06:0,39,398	0/0:21,0:21:52.40:0,52,398	0/0:18,0:18:32.66:0,33,356	0/0:27,0:27:74.90:0,75,710	0/0:43,0:41:99:0,114,941	0/0:26,0:25:59.94:0,60,523	0/0:33,0:32:67.87:0,68,593	0/0:17,0:17:32.48:0,32,216	0/1:30,1:32:26.07:197,0,26	0/1:8,17:23:20.43:20,0,66	0/1:22,0:22:25.68:26,0,162	0/1:23,0:21:6.88:7,0,319	0/0:25,0:25:65.99:0,66,664	0/0:32,0:31:83.85:0,84,846	0/0:19,0:19:49:0,49,339	0/0:29,0:26:64.15:0,64,555	0/0:18,0:18:42.43:0,42,403	0/0:48,0:48:99:0,101,907	0/1:23,0:23:11.10:93,0,11	1/1:18,0:18:7.90:72,8,0	0/1:28,1:29:8.21:123,0,8	0/0:26,0:26:35.48:0,35,235	0/0:36,0:36:85.35:0,85,944	0/0:22,0:22:57.01:0,57,651	0/0:16,0:15:41.87:0,42,382
chr10	73535197	.	GATTT	G	5148.80	PASS	AB=0.939;AC=12;AF=0.214;AN=56;BaseQRankSum=13.161;DP=510;FS=0.407;HRun=0;HaplotypeScore=82.8263;InbreedingCoeff=0.7643;MQ=70.33;MQ0=2;MQRankSum=-1.791;QD=29.93;ReadPosRankSum=1.715;VQSLOD=4.7883;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:63.22:1121,63,0	0/0:5,0:5:12.04:0,12,302	0/0:15,0:13:10.05:0,10,354	0/1:11,0:10:20.79:21,0,283	0/0:27,0:27:78.24:0,78,1885	0/0:21,0:21:63.17:0,63,1423	0/0:10,0:10:24.07:0,24,529	0/0:33,0:32:84.25:0,84,1818	0/0:7,0:7:21.04:0,21,427	1/1:2,21:22:60.19:1037,60,0	1/1:0,33:33:90.13:1441,90,0	0/0:9,0:9:21.06:0,21,429	0/0:7,0:7:21.07:0,21,505	0/0:23,0:23:63.20:0,63,1533	0/0:18,0:18:45.15:0,45,1134	0/0:9,0:9:24.08:0,24,574	0/0:26,0:26:72.20:0,72,1636	1/1:3,14:16:27.09:481,27,0	0/0:26,0:26:69.22:0,69,1652	0/0:26,0:26:72.23:0,72,1707	0/0:8,0:8:21.05:0,21,478	0/0:7,0:7:18.05:0,18,403	0/0:16,0:16:42.13:0,42,950	0/0:4,0:4:12.02:0,12,225	1/1:2,26:28:54.18:942,54,0	0/1:25,4:29:99:107,0,1564	0/0:28,0:28:75.26:0,75,1778	0/0:13,0:13:33.09:0,33,740
chr10	73535846	.	AT	A	515.66	PASS	AB=0.936;AC=6;AF=0.107;AN=56;BaseQRankSum=10.073;DP=474;FS=2.175;HRun=1;HaplotypeScore=66.7521;InbreedingCoeff=0.2172;MQ=68.36;MQ0=6;MQRankSum=-4.464;QD=5.67;ReadPosRankSum=1.738;VQSLOD=0.7997;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:23:99:183,0,147	0/0:11,0:11:33.11:0,33,512	0/0:36,1:15:5.15:0,5,346	0/0:35,0:19:25.75:0,26,266	0/0:28,0:28:72.24:0,72,1135	0/0:15,0:15:18.06:0,18,287	0/0:11,0:11:27.09:0,27,420	0/0:18,0:18:41.92:0,42,588	0/0:15,0:15:42.14:0,42,656	0/1:20,6:26:99:218,0,201	0/1:13,1:14:38.39:106,0,38	0/0:15,0:15:42.14:0,42,665	0/0:13,0:13:30.08:0,30,451	0/0:5,0:5:15.05:0,15,228	0/0:10,0:10:18.06:0,18,288	0/0:18,0:18:42.13:0,42,642	0/0:19,0:19:44.92:0,45,666	0/1:17,0:15:26.35:26,0,38	0/0:7,0:6:12.04:0,12,190	0/0:25,0:23:60.19:0,60,918	0/0:8,0:6:12.04:0,12,192	0/0:18,0:18:54.18:0,54,823	0/0:17,0:17:48.16:0,48,757	0/0:16,0:16:45.15:0,45,717	1/1:8,2:9:19.16:111,19,0	0/0:17,0:17:51.17:0,51,811	0/0:19,0:18:37.05:0,37,611	0/0:5,0:5:15.05:0,15,240
chr10	73535847	.	T	TGAAGGA	4304.10	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-1.620;DP=494;FS=8.867;HRun=0;HaplotypeScore=106.4311;InbreedingCoeff=0.9454;MQ=67.96;MQ0=5;MQRankSum=-7.210;QD=39.85;ReadPosRankSum=-0.320;VQSLOD=3.6206;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,8:23:51.15:1242,51,0	0/0:11,0:11:33.11:0,33,690	0/0:37,0:15:9.58:0,10,276	0/0:35,0:19:9.84:0,10,300	0/0:29,0:29:60.21:0,60,1284	0/0:15,0:15:15.05:0,15,306	0/0:11,0:11:24.05:0,24,403	0/0:21,0:21:29.83:0,30,583	0/0:15,0:15:33.11:0,33,664	1/1:13,14:27:63.19:1380,63,0	1/1:4,11:18:27.09:600,27,0	0/0:14,0:14:30.10:0,30,633	0/0:14,0:13:30.08:0,30,544	0/0:5,0:5:12.04:0,12,244	0/0:10,0:10:18.06:0,18,346	0/0:19,0:19:33.10:0,33,637	0/0:19,0:19:42.12:0,42,848	1/1:6,13:19:22.32:468,22,0	0/0:7,0:6:12.04:0,12,241	0/0:25,0:23:54.16:0,54,1020	0/0:8,0:6:12.04:0,12,259	0/0:18,0:18:51.17:0,51,1078	0/0:17,0:17:42.14:0,42,849	0/0:16,0:16:45.15:0,45,919	1/1:6,6:15:27.09:614,27,0	0/0:17,0:17:45.14:0,45,934	0/0:18,0:18:39.13:0,39,801	0/0:5,0:5:15.05:0,15,301
chr10	73536444	.	AGT	A	1381.88	PASS	AB=0.932;AC=17;AF=0.304;AN=56;BaseQRankSum=6.758;DP=857;FS=5.210;HRun=0;HaplotypeScore=141.7779;InbreedingCoeff=0.2093;MQ=46.43;MQ0=34;MQRankSum=-2.612;QD=4.35;ReadPosRankSum=-0.617;VQSLOD=2.6381;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,6:25:28.90:319,29,0	0/0:12,0:12:29.81:0,30,413	0/1:41,1:14:15.59:16,0,281	0/0:49,0:24:29.11:0,29,438	0/0:20,0:19:15.05:0,15,228	0/0:28,1:29:38.24:0,38,690	0/0:53,0:44:35.07:0,35,733	0/0:44,1:41:38.04:0,38,920	0/0:30,0:25:7.68:0,8,482	0/1:28,5:26:14.40:316,0,14	1/1:9,5:14:12.04:147,12,0	0/1:31,0:27:19.82:65,0,20	0/1:20,0:19:13.83:15,0,14	0/0:26,0:24:38.86:0,39,583	0/1:28,0:25:16.70:17,0,231	0/0:23,0:17:29.08:0,29,384	0/0:42,0:38:77.34:0,77,1092	0/1:12,5:16:28.47:309,0,28	0/0:31,0:25:38.96:0,39,517	0/0:25,0:24:42.14:0,42,652	0/0:100,1:89:80.45:0,80,1968	1/1:21,0:22:0.30:34,0,0	0/1:16,0:16:4.87:5,0,8	0/1:30,0:25:15.84:69,0,16	1/1:16,5:18:19.12:221,19,0	0/0:41,0:35:46.76:0,47,915	0/0:12,0:11:33.03:0,33,423	0/1:8,1:6:21.85:22,0,152
chr10	73536457	.	GT	G	1030	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=8.743;DP=1227;FS=6.749;HRun=1;HaplotypeScore=175.0287;InbreedingCoeff=0.8137;MQ=37.07;MQ0=163;MQRankSum=-3.378;QD=6.13;ReadPosRankSum=-0.183;VQSLOD=0.1394;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:31:11:0,11,88	0/0:23,0:15:35.08:0,35,521	0/0:38,0:11:28.69:0,29,415	0/0:43,0:18:41.70:0,42,583	0/0:27,0:21:21.06:0,21,302	0/0:34,0:33:45.59:0,46,754	0/0:89,0:66:63.97:0,64,1091	0/0:81,0:42:99:0,103,1471	0/0:38,0:26:44.35:0,44,695	0/0:45,0:28:45.36:0,45,420	0/0:16,0:12:6.55:0,7,46	1/1:45,0:29:53.95:484,54,0	0/1:34,0:23:57.80:112,0,58	0/0:46,0:27:56.01:0,56,822	0/0:34,0:24:22.07:0,22,315	0/0:33,0:20:40.48:0,40,553	0/0:55,0:46:99:0,101,1468	0/0:29,0:23:28.09:0,28,224	0/0:46,0:23:49.28:0,49,862	0/0:26,0:22:48.16:0,48,747	0/0:167,0:130:99:0,171,2527	1/1:26,3:23:17.08:164,17,0	1/1:15,1:14:11.25:111,11,0	1/1:39,2:31:21.39:319,21,0	0/0:40,0:26:16.66:0,17,130	0/0:63,0:41:99:0,113,1468	0/0:21,0:15:42.12:0,42,627	0/0:11,0:6:12.93:0,13,194
chr10	73536476	.	GGT	G	261.38	PASS	AB=0.960;AC=8;AF=0.148;AN=54;BaseQRankSum=5.044;DP=1332;FS=19.759;HRun=0;HaplotypeScore=190.9594;InbreedingCoeff=-0.0315;MQ=30.39;MQ0=270;MQRankSum=-5.126;QD=0.78;ReadPosRankSum=-0.820;VQSLOD=0.7833;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:31:7.24:0,7,162	0/0:17,0:10:5.94:0,6,82	./.	0/0:23,0:5:5.37:0,5,24	0/1:22,0:16:21.11:21,0,138	0/0:33,0:31:7.26:0,7,239	0/1:98,1:75:13.83:14,0,544	0/0:112,0:45:27.18:0,27,590	0/0:34,1:20:1.11:0,1,225	0/1:44,3:20:34.88:106,0,35	1/1:16,1:11:8.45:65,8,0	0/0:47,1:25:19.37:0,19,294	0/0:39,0:25:5.01:0,5,309	0/0:47,0:20:22.12:0,22,376	0/0:30,0:21:3.54:0,4,200	0/0:29,1:16:16.86:0,17,213	0/0:54,1:46:54.87:0,55,850	0/1:29,3:22:99:124,0,101	0/1:59,1:14:15.97:16,0,188	0/0:19,0:10:6.02:0,6,92	0/0:212,0:158:98.41:0,98,1277	0/0:38,0:31:14.79:0,15,162	0/0:17,0:12:6.02:0,6,91	0/0:56,0:37:6.51:0,7,337	0/1:45,4:27:46.28:46,0,53	0/0:66,0:36:33.58:0,34,635	0/0:23,0:10:7.60:0,8,181	0/0:12,0:5:9.03:0,9,138
chr10	73536508	.	G	GGT	982.34	PASS	AB=0.929;AC=18;AF=0.346;AN=52;BaseQRankSum=4.879;DP=1200;FS=2.041;HRun=0;HaplotypeScore=211.9762;InbreedingCoeff=-0.1919;MQ=27.11;MQ0=320;MQRankSum=-2.045;QD=1.62;ReadPosRankSum=-0.969;VQSLOD=2.5953;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:45,0:30:51.25:56,0,51	0/0:23,0:7:9.40:0,9,83	./.	./.	0/0:26,0:22:5.30:0,5,166	0/0:23,0:18:2.04:0,2,190	0/0:107,1:78:50.46:0,50,661	0/0:72,0:18:24.24:0,24,242	0/1:34,0:19:6.12:6,0,144	0/1:45,1:15:96.48:125,0,96	0/1:10,1:7:10.70:43,0,11	0/1:39,4:18:45.14:197,0,45	1/1:33,6:20:10.22:320,10,0	0/0:49,1:20:20.44:0,20,218	0/1:31,2:21:22.61:23,0,144	0/1:33,1:15:17.73:18,0,197	0/1:57,1:44:49.13:49,0,426	0/0:30,0:16:14.01:0,14,133	0/0:41,0:7:15.05:0,15,179	0/1:18,0:9:0:0,0,0	0/0:194,2:139:99:0,103,1303	0/1:32,3:21:33.97:81,0,34	1/1:18,1:12:2.89:49,3,0	0/1:59,4:39:85.84:127,0,86	0/1:39,2:21:16.45:16,0,28	0/1:44,0:26:16.53:17,0,440	0/1:20,1:8:4.93:5,0,134	0/0:13,0:9:12.01:0,12,134
chr10	73536612	.	T	TATG	315.25	PASS	AB=0.983;AC=12;AF=0.214;AN=56;BaseQRankSum=6.918;DP=1365;DS;FS=23.633;HRun=0;HaplotypeScore=223.1979;InbreedingCoeff=-0.1953;MQ=25.01;MQ0=329;MQRankSum=-4.052;QD=0.74;ReadPosRankSum=-2.722;VQSLOD=0.5988;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:21:99:146,0,151	0/0:19,1:9:6:0,6,74	0/0:39,0:3:6.02:0,6,106	0/0:60,0:3:2.30:0,2,54	0/0:27,0:19:8.86:0,9,127	0/1:32,1:25:57.83:58,0,533	0/0:109,0:78:77.89:0,78,1297	0/0:103,0:34:67.31:0,67,864	0/1:47,1:27:54.89:55,0,338	0/1:53,0:21:25.58:26,0,346	1/1:17,0:8:1.29:3,1,0	0/0:62,1:38:7.48:0,7,538	0/1:45,0:23:52.93:53,0,334	0/1:44,1:24:2.78:3,0,307	0/0:35,0:23:16.36:0,16,206	0/0:35,2:17:15.91:0,16,219	0/1:24,0:14:24.38:24,0,292	0/1:16,0:10:17.28:17,0,179	0/1:67,1:15:26.52:27,0,437	0/0:11,0:9:10.58:0,11,249	0/0:206,0:141:86.12:0,86,1489	0/0:29,0:18:17.99:0,18,268	0/0:21,0:15:9.08:0,9,181	0/0:63,1:35:5.18:0,5,374	0/1:31,0:21:42.13:42,0,47	0/0:72,0:37:49.74:0,50,1165	0/0:25,0:15:29.38:0,29,428	0/0:10,0:6:9.03:0,9,165
chr10	73536646	.	G	GT	174.63	PASS	AB=0.922;AC=15;AF=0.278;AN=54;BaseQRankSum=5.552;DP=812;DS;FS=30.437;HRun=0;HaplotypeScore=161.9471;InbreedingCoeff=-0.1812;MQ=32.30;MQ0=79;MQRankSum=-2.789;QD=0.51;ReadPosRankSum=-2.032;VQSLOD=1.1206;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,1:16:6.39:6,0,14	0/0:7,1:7:4.37:0,4,44	0/0:82,0:9:21:0,21,235	0/0:64,0:6:8.18:0,8,94	0/0:10,0:8:5.91:0,6,58	0/1:20,2:16:21.49:21,0,247	0/1:47,8:44:99:110,0,318	0/0:34,3:16:12.67:0,13,259	0/1:26,2:19:13.43:13,0,178	0/1:14,2:13:39.76:40,0,53	./.	0/1:32,0:25:53.97:54,0,115	0/0:21,3:19:1.77:0,2,109	0/1:31,4:17:5.13:5,0,168	0/1:19,1:18:15.69:16,0,140	0/1:25,0:14:9.92:10,0,70	0/0:17,2:10:1.99:0,2,151	1/1:5,0:4:2.60:10,3,0	0/1:20,1:10:6.44:6,0,109	0/0:5,0:3:5.97:0,6,61	0/0:131,6:96:31.61:0,32,439	1/1:11,1:9:1.74:11,2,0	0/0:8,0:8:11.67:0,12,115	0/0:34,0:22:15.17:0,15,183	0/0:16,0:14:4.81:0,5,35	0/1:40,1:29:9.04:9,0,370	0/0:14,0:8:20.14:0,20,226	0/0:5,0:4:4.15:0,4,15
chr10	73536819	.	CTATCTA	C	655.10	PASS	AB=0.698;AC=15;AF=0.278;AN=54;BaseQRankSum=5.214;DP=450;FS=5.798;HRun=0;HaplotypeScore=103.3469;InbreedingCoeff=0.5549;MQ=50.67;MQ0=16;MQRankSum=-1.119;QD=6.36;ReadPosRankSum=-0.802;VQSLOD=1.6955;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:8,0:8:24.04:0,24,600	0/0:19,0:8:18.05:0,18,264	0/0:31,0:14:20.88:0,21,396	0/0:20,0:18:23.29:0,23,710	0/0:18,0:17:27.09:0,27,571	0/0:14,0:14:27.09:0,27,544	0/0:18,0:17:39.13:0,39,612	0/1:21,0:19:9.26:9,0,710	1/1:6,0:5:2.18:26,2,0	1/1:6,0:6:4.36:29,4,0	0/1:2,8:10:11.69:65,0,12	1/1:0,5:6:6.02:141,6,0	0/0:11,0:11:21.07:0,21,568	0/0:26,0:25:51.17:0,51,1457	0/0:13,0:13:27.09:0,27,648	0/0:26,0:25:64.38:0,64,1508	1/1:0,0:11:6.02:84,6,0	0/0:12,0:10:10.16:0,10,324	0/0:19,0:19:48.16:0,48,984	0/0:27,0:27:47.18:0,47,1193	1/1:10,0:10:5.60:95,6,0	0/1:2,12:14:13.26:43,0,13	1/1:15,1:17:6.11:323,6,0	0/0:8,0:8:1.25:0,1,3	0/0:26,0:26:72.18:0,72,1435	0/0:19,0:19:48.10:0,48,1204	0/0:21,0:18:49.25:0,49,783
chr10	73537043	.	TTTTG	T	6281.21	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.832;DP=611;FS=11.475;HRun=0;HaplotypeScore=102.6498;InbreedingCoeff=0.9957;MQ=61.39;MQ0=5;MQRankSum=-5.314;QD=29.63;ReadPosRankSum=2.805;VQSLOD=4.3772;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,25:35:30.02:440,30,0	0/0:10,0:10:21.03:0,21,443	0/0:31,0:24:27.09:0,27,507	0/0:33,0:25:30.08:0,30,638	0/0:20,0:19:51.17:0,51,1221	0/0:28,0:28:72.25:0,72,1717	0/0:29,0:29:59.76:0,60,1266	0/0:23,0:23:42.13:0,42,921	0/0:21,0:21:54.17:0,54,1249	1/1:5,19:24:54.18:882,54,0	1/1:1,12:13:33.03:489,33,0	1/1:5,23:28:66.23:1100,66,0	1/1:0,11:11:21.07:332,21,0	0/0:20,0:20:48.16:0,48,1127	0/0:23,0:23:66.23:0,66,1521	0/0:13,0:13:36.12:0,36,850	0/0:29,0:28:66.13:0,66,1386	1/1:4,15:18:33.11:550,33,0	0/0:17,0:17:36.11:0,36,751	0/0:8,0:8:18.06:0,18,390	0/0:19,0:19:42.14:0,42,1019	1/1:5,10:15:36.09:571,36,0	1/1:2,15:17:33.11:550,33,0	1/1:8,25:33:57.14:919,57,0	1/1:1,13:14:27.09:450,27,0	0/0:34,0:34:32.34:0,32,1648	0/0:31,0:31:84.29:0,84,2066	0/0:10,0:10:18.06:0,18,432
chr10	73537177	.	C	CA	4074.62	PASS	AB=0.920;AC=11;AF=0.196;AN=56;BaseQRankSum=-7.299;DP=475;FS=16.373;HRun=0;HaplotypeScore=57.3317;InbreedingCoeff=0.8752;MQ=64.53;MQ0=1;MQRankSum=-1.147;QD=28.30;ReadPosRankSum=8.185;VQSLOD=2.3002;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:37:84.97:1249,85,0	0/0:8,0:8:24.02:0,24,239	0/0:13,0:10:23.72:0,24,202	0/0:10,0:9:23.87:0,24,239	0/0:11,0:11:29.89:0,30,282	0/0:17,0:17:33:0,33,348	0/0:30,0:30:78.49:0,78,902	0/0:12,0:12:20.94:0,21,172	0/0:21,0:21:56.97:0,57,629	1/1:1,29:31:87.21:1090,87,0	1/1:2,9:11:17.27:354,17,0	0/0:15,0:15:15.02:0,15,163	0/0:10,0:10:13.16:0,13,127	0/0:16,0:16:37.08:0,37,377	0/0:13,0:13:32.91:0,33,326	0/0:8,0:8:18.81:0,19,227	0/0:34,0:34:99:0,102,1173	1/1:0,31:32:78.17:1016,78,0	0/0:13,0:13:27:0,27,305	0/0:14,0:14:38.99:0,39,406	0/0:27,0:27:62.99:0,63,670	0/0:6,0:6:14.72:0,15,110	0/0:6,0:6:3:0,3,27	0/1:21,0:23:1.34:1,0,254	1/1:0,10:10:27.09:364,27,0	0/0:20,0:20:41.22:0,41,436	0/0:20,0:20:56.95:0,57,624	0/0:7,0:7:14.94:0,15,146
chr10	73537503	.	C	CAACCTTGG	22701.42	PASS	AB=0.966;AC=21;AF=0.375;AN=56;BaseQRankSum=-4.981;DP=696;FS=0.000;HRun=0;HaplotypeScore=168.8072;InbreedingCoeff=0.9237;MQ=87.04;MQ0=0;MQRankSum=-18.489;QD=84.08;ReadPosRankSum=-2.004;VQSLOD=4.7381;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,20:39:84.29:3231,84,0	0/0:12,0:12:36.12:0,36,1011	0/0:33,0:32:90.24:0,90,2348	0/0:25,0:25:52.79:0,53,1364	0/0:22,0:22:63.20:0,63,1712	0/0:29,0:29:84.27:0,84,2254	0/0:29,0:29:87.30:0,87,2396	0/0:17,0:17:51.16:0,51,1363	0/0:33,0:33:93.32:0,93,2547	1/1:9,21:36:99:4211,108,0	1/1:7,9:17:45.15:1649,45,0	1/1:8,15:26:63.22:2491,63,0	1/1:3,13:16:48.16:2043,48,0	0/0:27,0:27:81.28:0,81,2309	0/0:32,0:32:93.32:0,93,2555	0/0:33,0:33:93.29:0,93,2507	0/1:27,1:28:52.47:52,0,2129	1/1:3,9:17:30.10:1304,30,0	0/0:25,0:25:69.24:0,69,1935	0/0:25,0:25:72.23:0,72,1983	0/0:21,0:21:63.22:0,63,1783	1/1:9,17:30:78.27:2838,78,0	1/1:3,14:21:42.14:1573,42,0	1/1:9,11:21:39.13:1561,39,0	1/1:4,11:19:42.14:1748,42,0	0/0:22,0:22:60.21:0,60,1722	0/0:29,0:29:78.27:0,78,2171	0/0:12,0:12:36.08:0,36,960
chr10	73537586	.	TACAA	T	3233.06	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.487;DP=610;FS=2.849;HRun=0;HaplotypeScore=102.8602;InbreedingCoeff=0.9708;MQ=63.03;MQ0=1;MQRankSum=-2.826;QD=37.16;ReadPosRankSum=-0.130;VQSLOD=3.2835;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,99,2247	0/0:4,0:4:6.02:0,6,150	0/0:22,0:20:29.24:0,29,607	0/0:24,0:19:27.03:0,27,468	0/0:22,0:22:60.18:0,60,1383	0/0:24,0:24:69.22:0,69,1643	0/0:22,0:22:57.20:0,57,1379	0/0:28,0:28:54.17:0,54,1250	0/0:20,0:20:51.04:0,51,1089	0/0:33,0:33:87.24:0,87,2029	0/0:18,0:18:39.13:0,39,922	1/1:8,14:22:54.17:893,54,0	1/1:4,12:16:42.14:696,42,0	0/0:17,0:17:39.13:0,39,963	0/0:40,0:40:99:0,108,2458	0/0:30,0:30:78.24:0,78,1842	0/0:39,0:39:99:0,102,2470	0/0:21,0:21:48.16:0,48,1163	0/0:20,0:20:48.16:0,48,1092	0/0:17,0:17:36.12:0,36,868	0/0:18,0:18:51.14:0,51,1104	1/1:12,7:19:36.12:578,36,0	1/1:5,7:12:27.09:443,27,0	1/1:0,18:18:48.16:801,48,0	0/0:8,0:8:15.04:0,15,321	0/0:17,0:17:45.15:0,45,1106	0/0:33,0:33:75.23:0,75,1723	0/0:7,0:7:21.07:0,21,524
chr10	73538282	.	T	TTA	886.48	PASS	AB=0.806;AC=10;AF=0.179;AN=56;BaseQRankSum=1.288;DP=492;FS=0.000;HRun=0;HaplotypeScore=73.7361;InbreedingCoeff=0.6747;MQ=67.48;MQ0=6;MQRankSum=0.799;QD=12.14;ReadPosRankSum=0.844;VQSLOD=3.1984;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:80.47:0,80,726	0/0:2,0:2:2.99:0,3,23	0/0:38,0:18:12.42:0,12,131	0/0:25,0:11:13.52:0,14,125	0/0:14,0:14:31.41:0,31,329	0/0:22,0:22:63.06:0,63,665	0/0:15,0:15:44.78:0,45,452	0/0:28,0:28:74.44:0,74,658	0/0:23,0:23:65.93:0,66,667	0/0:19,0:21:46.83:0,47,304	0/0:11,0:11:22.73:0,23,127	1/1:1,12:14:5.99:264,6,0	1/1:0,0:9:14.74:92,15,0	0/0:11,0:11:17.44:0,17,187	0/0:12,0:12:35.77:0,36,358	0/0:16,0:16:44.96:0,45,460	0/0:37,0:37:99:0,100,978	0/1:15,0:16:36.11:119,0,36	0/0:25,0:24:62.60:0,63,589	0/0:11,0:11:26.51:0,27,241	0/0:11,0:11:29.19:0,29,233	1/1:2,5:8:13.22:152,13,0	0/1:4,4:8:13.18:137,0,13	1/1:2,14:17:23.82:282,24,0	0/0:9,0:9:18.18:0,18,124	0/0:19,0:19:54.31:0,54,474	0/0:28,0:29:37.60:0,38,539	0/0:6,0:6:17.99:0,18,167
chr10	73539051	.	ATG	A	902.04	PASS	AB=0.778;AC=7;AF=0.125;AN=56;BaseQRankSum=8.597;DP=687;FS=2.483;HRun=0;HaplotypeScore=136.3977;InbreedingCoeff=0.4922;MQ=60.64;MQ0=5;MQRankSum=-7.319;QD=11.42;ReadPosRankSum=1.547;VQSLOD=3.5276;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:89.98:0,90,1549	0/0:8,0:8:18.06:0,18,324	0/0:35,0:9:14.99:0,15,255	0/0:36,1:15:15.59:0,16,247	0/0:24,0:24:66.23:0,66,1184	0/0:25,0:25:63.22:0,63,1123	0/0:47,0:47:99:0,126,2241	0/0:23,0:23:57.19:0,57,988	0/0:30,0:30:84.29:0,84,1493	1/1:6,10:16:28.36:459,28,0	1/1:3,17:20:16.53:213,17,0	0/1:14,0:14:8.94:9,0,406	0/0:14,0:14:23.24:0,23,244	0/0:31,0:31:78.27:0,78,1369	0/0:23,0:23:63.22:0,63,1129	0/0:15,0:15:36.12:0,36,648	0/0:41,0:41:99:0,111,1955	0/1:10,5:15:22.77:210,0,23	0/0:13,0:13:33.11:0,33,593	0/0:19,0:19:48.64:0,49,865	0/0:60,0:60:99:0,160,2839	0/0:21,0:21:35.44:0,35,539	0/0:13,0:13:8.87:0,9,162	0/0:31,0:30:36.83:0,37,566	0/1:4,10:14:32.57:151,0,33	0/0:26,0:26:75.25:0,75,1312	0/0:21,0:20:51.17:0,51,918	0/0:4,0:4:12.04:0,12,214
chr10	73539062	.	T	TGC	1759.38	PASS	AB=0.987;AC=16;AF=0.286;AN=56;BaseQRankSum=10.032;DP=652;FS=19.152;HRun=0;HaplotypeScore=133.2091;InbreedingCoeff=0.4106;MQ=57.34;MQ0=5;MQRankSum=-1.391;QD=7.42;ReadPosRankSum=0.268;VQSLOD=1.7672;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,43:52:46.21:1066,46,0	0/0:6,0:6:15:0,15,150	0/1:25,0:6:13.59:14,0,42	0/0:28,0:8:2.81:0,3,13	0/0:24,0:24:21.94:0,22,607	0/0:22,0:22:44.07:0,44,535	0/0:48,0:48:92.91:0,93,1121	0/0:18,0:17:36.04:0,36,348	0/0:27,0:27:59.90:0,60,635	0/1:9,0:16:80.43:84,0,80	0/1:11,0:22:14.70:15,0,40	1/1:14,0:15:26.73:202,27,0	0/1:11,0:12:11.11:69,0,11	0/0:28,0:28:69.05:0,69,766	0/0:21,0:21:54.10:0,54,633	0/0:13,0:13:30.03:0,30,321	0/0:40,0:39:99:0,102,1185	0/1:12,0:19:17.81:160,0,18	0/0:14,0:14:36.03:0,36,397	0/0:15,0:15:7.17:0,7,377	0/0:59,0:59:99:0,132,1359	1/1:18,0:19:15.28:91,15,0	1/1:14,0:14:2.84:26,3,0	1/1:22,1:25:14.83:186,15,0	0/1:8,0:15:27.71:28,0,49	0/0:25,0:25:63.13:0,63,723	0/0:19,0:19:47.66:0,48,486	0/0:6,0:6:17.89:0,18,161
chr10	73539063	.	G	GCA	1176.03	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=12.180;DP=657;FS=4.461;HRun=0;HaplotypeScore=137.8677;InbreedingCoeff=0.1026;MQ=57.41;MQ0=4;MQRankSum=-2.590;QD=5.47;ReadPosRankSum=2.447;VQSLOD=2.8651;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:52,0:52:73.25:508,0,73	0/0:7,0:7:17.99:0,18,236	0/0:26,0:6:12.40:0,12,107	0/0:28,0:8:7.37:0,7,45	0/0:24,0:24:63.43:0,63,907	0/0:23,0:23:57.06:0,57,773	0/0:49,0:49:99:0,123,1721	0/0:17,0:16:48.08:0,48,638	0/0:25,0:25:69.17:0,69,935	0/1:16,0:16:3.40:208,0,3	0/1:22,0:22:19.39:19,0,34	0/1:16,0:16:12.08:12,0,20	0/1:12,0:12:12.85:13,0,32	0/0:28,0:28:78.15:0,78,1090	0/0:20,0:20:57.17:0,57,822	0/0:13,0:13:36.06:0,36,491	0/0:43,0:42:99:0,117,1640	1/1:14,6:20:36.70:437,37,0	0/0:14,0:14:38.92:0,39,553	0/0:15,0:15:34.45:0,34,547	0/0:59,0:59:99:0,156,2089	0/1:19,0:19:8.61:32,0,9	0/1:15,0:15:3.16:3,0,20	0/1:28,0:27:6.59:57,0,7	0/1:15,0:15:26.20:37,0,26	0/0:25,0:25:69.21:0,69,998	0/0:19,0:19:54.09:0,54,726	0/0:6,0:6:18.06:0,18,250
chr10	73539064	.	C	CACGT	1765.37	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=10.629;DP=661;FS=1.660;HRun=0;HaplotypeScore=156.8673;InbreedingCoeff=0.4999;MQ=57.46;MQ0=6;MQRankSum=-6.048;QD=10.32;ReadPosRankSum=1.339;VQSLOD=3.4110;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:65.39:0,65,340	0/0:7,0:7:18.06:0,18,353	0/0:23,0:5:14.74:0,15,135	0/0:28,0:8:5.44:0,5,63	0/0:23,0:23:53.95:0,54,1266	0/0:23,0:23:57.15:0,57,1097	0/0:47,0:47:99:0,104,2307	0/0:17,0:16:48.09:0,48,854	0/0:25,0:25:69.17:0,69,1299	1/1:13,7:22:47.17:708,47,0	1/1:21,2:23:18.04:170,18,0	0/1:16,0:16:86.38:87,0,86	0/1:12,0:12:15.56:92,0,16	0/0:29,0:29:78.21:0,78,1470	0/0:20,0:20:57.18:0,57,1130	0/0:13,0:13:36.11:0,36,664	0/0:43,0:42:99:0,122,2255	1/1:20,0:20:34.88:438,35,0	0/0:14,0:13:38.92:0,39,739	0/0:15,0:15:42.13:0,42,785	0/0:58,0:58:99:0,146,2847	0/1:18,0:18:18.02:36,0,18	0/1:15,0:15:25.40:25,0,40	0/1:30,0:29:7.47:59,0,7	1/1:12,3:15:21.07:328,21,0	0/0:24,0:24:69.21:0,69,1294	0/0:20,0:20:54.18:0,54,1047	0/0:6,0:6:18.06:0,18,342
chr10	73539069	.	G	GCGCGCA	1806.45	PASS	AB=0.914;AC=14;AF=0.250;AN=56;BaseQRankSum=6.262;DP=683;FS=13.419;HRun=0;HaplotypeScore=184.1981;InbreedingCoeff=0.3374;MQ=56.64;MQ0=8;MQRankSum=-0.197;QD=7.28;ReadPosRankSum=1.445;VQSLOD=1.6354;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:56,0:56:20.16:419,0,20	0/0:6,0:6:18.05:0,18,292	0/1:28,0:4:19.41:19,0,75	0/0:24,0:5:2.91:0,3,30	0/0:21,0:25:45.11:0,45,1168	0/0:19,0:23:60.06:0,60,1098	0/0:37,0:46:99:0,120,2174	0/0:17,0:16:45.09:0,45,659	0/0:23,0:24:66.16:0,66,1215	0/1:24,0:24:99:174,0,173	0/1:22,0:22:62.63:63,0,105	1/1:14,4:18:28.02:541,28,0	1/1:1,10:12:15.01:330,15,0	0/0:26,0:30:78.19:0,78,1536	0/0:22,0:22:38.22:0,38,1217	0/0:11,0:12:30.09:0,30,584	0/0:39,0:39:99:0,114,2242	0/0:23,0:23:2.98:0,3,161	0/0:15,0:14:39.02:0,39,733	0/0:14,0:15:41.31:0,41,801	0/0:58,0:60:99:0,162,2776	1/1:1,17:19:5.72:87,6,0	1/1:1,0:19:2.58:88,3,0	0/1:5,24:32:5.59:187,0,6	0/1:16,0:17:59.78:65,0,60	0/0:25,0:25:75.15:0,75,1428	0/0:18,0:20:54.07:0,54,921	0/0:6,0:7:20.90:0,21,337
chr10	73539094	.	CGA	C	301.53	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.309;DP=705;FS=3.272;HRun=0;HaplotypeScore=143.6386;InbreedingCoeff=0.9231;MQ=54.13;MQ0=16;MQRankSum=-3.924;QD=13.71;ReadPosRankSum=0.450;VQSLOD=3.6393;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:59:95.97:0,96,1365	0/0:4,0:4:12.04:0,12,191	0/0:32,0:7:21.02:0,21,300	0/0:27,0:7:14.78:0,15,187	0/0:24,0:24:50.06:0,50,693	0/0:24,0:24:53.34:0,53,803	0/0:41,0:41:98.03:0,98,1389	0/0:27,0:26:74.36:0,74,1150	0/0:23,0:23:63.07:0,63,970	0/0:40,0:39:83.84:0,84,1374	0/0:19,0:19:28.22:0,28,335	0/0:16,0:14:31.17:0,31,420	0/0:16,0:16:38.78:0,39,523	0/0:35,0:35:97.65:0,98,1493	0/0:21,1:22:18.58:0,19,835	0/0:10,0:10:22.63:0,23,342	0/0:39,0:38:99:0,101,1580	1/1:15,7:22:45.36:396,45,0	0/0:14,0:11:30.06:0,30,435	0/0:16,0:16:42.14:0,42,681	0/0:59,0:59:99:0,160,2346	0/0:17,0:17:28.48:0,28,254	0/0:21,0:21:24.04:0,24,330	0/0:32,0:32:30.70:0,31,397	0/0:15,0:15:33.08:0,33,366	0/0:25,0:25:63.21:0,63,1018	0/0:18,0:18:53.19:0,53,733	0/0:5,0:5:14.88:0,15,216
chr10	73539165	.	CGA	C	2258.74	PASS	AB=0.977;AC=16;AF=0.286;AN=56;BaseQRankSum=10.849;DP=690;FS=2.478;HRun=0;HaplotypeScore=133.6615;InbreedingCoeff=0.2723;MQ=64.63;MQ0=10;MQRankSum=0.344;QD=10.27;ReadPosRankSum=2.952;VQSLOD=3.7384;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:32:82.94:86,0,83	0/0:10,0:10:30.09:0,30,460	0/0:39,0:15:7.19:0,7,244	0/0:52,0:29:0.97:0,1,211	0/0:23,0:23:49.72:0,50,793	0/0:24,1:25:16.32:0,16,798	0/0:26,0:26:60.20:0,60,984	0/0:26,0:28:61.42:0,61,891	0/0:34,0:34:93.32:0,93,1526	1/1:10,26:35:93.28:1146,93,0	1/1:4,9:13:30.07:376,30,0	0/1:14,0:18:21.91:43,0,22	0/1:13,0:14:4.36:4,0,98	0/0:35,0:35:81.26:0,81,1303	0/0:20,0:20:57.19:0,57,935	0/1:8,1:9:10.74:11,0,369	0/0:44,0:44:99:0,117,1868	1/1:3,13:16:39.08:473,39,0	0/1:10,1:11:7.77:8,0,407	0/0:23,0:22:63.22:0,63,1040	0/0:51,0:50:99:0,117,1838	0/1:17,0:21:22.48:31,0,22	0/1:14,0:21:17.27:17,0,53	0/1:13,0:14:15.83:16,0,53	1/1:5,8:13:18.05:223,18,0	0/0:27,2:29:2.64:0,3,1119	0/0:16,0:16:45.14:0,45,708	0/0:13,0:12:36.12:0,36,598
chr10	73539176	.	GAGAC	G	1255.62	PASS	AB=0.804;AC=7;AF=0.125;AN=56;BaseQRankSum=5.940;DP=688;FS=0.000;HRun=0;HaplotypeScore=165.1551;InbreedingCoeff=0.0129;MQ=61.82;MQ0=14;MQRankSum=1.640;QD=7.52;ReadPosRankSum=-0.456;VQSLOD=2.5400;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:35:12.08:12,0,230	0/0:12,0:12:33.06:0,33,778	0/0:32,0:11:17.72:0,18,219	0/1:39,0:20:48.01:48,0,165	0/0:24,0:24:21.86:0,22,1458	0/0:23,0:23:63.14:0,63,1355	0/0:29,0:29:81.19:0,81,1663	0/0:27,0:26:64.82:0,65,1169	0/0:32,0:32:96.14:0,96,2285	0/0:40,0:39:92.62:0,93,809	0/0:18,0:18:17:0,17,217	0/1:9,9:17:6.93:458,0,7	0/1:11,3:14:67.91:181,0,68	0/0:30,0:30:81.26:0,81,1939	0/0:20,0:20:60.19:0,60,1422	0/0:10,0:10:30.04:0,30,559	0/0:46,0:46:99:0,120,2851	0/0:20,0:20:41.74:0,42,387	0/0:14,0:14:41.97:0,42,738	0/0:24,0:23:69.22:0,69,1683	0/0:44,0:44:99:0,115,2886	0/1:11,12:23:47.66:158,0,48	0/1:14,6:20:65.08:280,0,65	0/1:9,6:14:1.83:248,0,2	0/0:14,0:14:9.73:0,10,186	0/0:30,0:30:87.20:0,87,1970	0/0:17,0:17:51.12:0,51,1066	0/0:14,0:13:39.11:0,39,992
chr10	73539194	.	G	GAC	441.66	PASS	AB=0.770;AC=6;AF=0.107;AN=56;BaseQRankSum=8.639;DP=678;FS=6.940;HRun=0;HaplotypeScore=146.1103;InbreedingCoeff=-0.0230;MQ=54.83;MQ0=15;MQRankSum=-4.767;QD=3.68;ReadPosRankSum=-5.464;VQSLOD=0.1629;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,3:28:99:124,0,116	0/0:11,0:11:33.10:0,33,482	0/0:18,0:7:10.25:0,10,137	0/0:29,0:13:17.88:0,18,220	0/0:27,0:27:75.24:0,75,1122	0/0:20,0:20:54.18:0,54,826	0/0:35,0:35:99:0,99,1447	0/0:28,0:27:72.21:0,72,1022	0/0:29,0:29:87.30:0,87,1329	0/0:38,0:37:95.80:0,96,1436	0/0:17,0:17:36.99:0,37,472	0/1:13,7:20:57.65:89,0,58	0/1:6,5:11:25.99:145,0,26	0/0:28,0:28:84.28:0,84,1272	0/0:18,0:18:54.18:0,54,822	0/0:10,0:10:30.10:0,30,459	0/0:46,0:46:99:0,132,1986	0/0:24,0:24:66.15:0,66,826	0/0:21,0:21:63.10:0,63,817	0/0:26,0:25:75.25:0,75,1142	0/0:48,0:47:99:0,126,1900	0/1:21,7:28:68.83:139,0,69	0/1:9,11:20:17.71:18,0,40	0/1:8,2:9:3.75:51,0,4	0/0:18,0:17:36.50:0,37,455	0/0:32,0:32:93.30:0,93,1381	0/0:19,0:19:57.18:0,57,849	0/0:13,0:13:39.13:0,39,597
chr10	73539206	.	C	CAG	4402.53	PASS	AB=0.814;AC=15;AF=0.268;AN=56;BaseQRankSum=2.847;DP=692;FS=8.401;HRun=0;HaplotypeScore=138.1033;InbreedingCoeff=0.3980;MQ=59.04;MQ0=10;MQRankSum=-4.768;QD=16.19;ReadPosRankSum=-3.086;VQSLOD=3.7947;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,3:30:89.16:189,0,89	0/0:11,0:11:33.11:0,33,439	0/0:20,0:12:27.29:0,27,292	0/1:35,0:18:9.58:10,0,171	0/0:28,0:28:75.25:0,75,995	0/0:19,0:19:48.16:0,48,639	0/0:30,0:30:84.27:0,84,1115	0/0:28,0:28:81.24:0,81,1040	0/0:26,0:26:72.22:0,72,938	1/1:10,27:36:87.30:1490,87,0	1/1:6,13:19:22.84:413,23,0	0/1:16,6:22:98.75:99,0,113	0/1:7,5:12:57.81:127,0,58	0/0:29,0:29:72.24:0,72,957	0/0:18,0:18:51.15:0,51,660	0/0:11,0:11:33.08:0,33,409	0/0:46,0:46:99:0,110,1414	1/1:7,18:25:60.16:978,60,0	0/0:26,0:26:66.19:0,66,840	0/0:25,0:24:66.20:0,66,859	0/0:45,0:45:99:0,117,1511	0/1:21,7:28:43.87:314,0,44	0/1:14,11:25:37.63:112,0,38	0/1:11,2:12:0.96:1,0,18	1/1:1,21:21:38.91:670,39,0	0/0:26,0:26:69.21:0,69,902	0/0:18,0:18:51.15:0,51,661	0/0:14,0:14:42.12:0,42,539
chr10	73539634	.	T	TG	1729.44	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.898;DP=659;FS=1.136;HRun=6;HaplotypeScore=69.2176;InbreedingCoeff=0.9935;MQ=74.70;MQ0=0;MQRankSum=-2.147;QD=29.82;ReadPosRankSum=1.012;VQSLOD=4.3359;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,141,1431	0/0:8,0:8:24.05:0,24,245	0/0:35,0:30:62.35:0,62,610	0/0:35,0:30:71.14:0,71,715	0/0:24,0:24:66.05:0,66,651	0/0:21,0:21:60.13:0,60,612	0/0:25,0:25:63.14:0,63,642	0/0:24,0:24:63.13:0,63,638	0/0:18,0:18:45.09:0,45,452	1/1:4,16:20:48.14:590,48,0	1/1:0,20:20:60.19:754,60,0	0/0:15,0:15:42.08:0,42,422	0/0:26,0:26:63.10:0,63,628	0/0:16,0:16:45.10:0,45,459	0/0:19,0:19:54.12:0,54,551	0/0:19,0:19:54.08:0,54,531	0/0:43,0:43:99:0,120,1194	0/0:25,0:25:69.12:0,69,694	0/0:17,0:17:48.10:0,48,484	0/0:12,0:12:36.08:0,36,367	0/0:33,0:33:81.11:0,81,803	0/0:26,0:26:63.12:0,63,635	0/0:18,0:18:39.08:0,39,396	0/0:33,0:33:87.19:0,87,887	1/1:2,16:18:42.13:528,42,0	0/0:24,0:24:69.11:0,69,679	0/0:27,0:27:78.17:0,78,790	0/0:6,0:6:15.03:0,15,152
chr10	73540126	.	CGT	C	205.60	PASS	AB=0.941;AC=8;AF=0.154;AN=52;BaseQRankSum=2.836;DP=567;FS=14.393;HRun=0;HaplotypeScore=108.6118;InbreedingCoeff=-0.0353;MQ=70.60;MQ0=6;MQRankSum=1.724;QD=1.26;ReadPosRankSum=0.798;VQSLOD=0.8489;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:13.37:0,13,101	1/1:9,0:9:5.99:53,6,0	./.	./.	0/1:23,2:25:10.32:10,0,254	0/0:18,0:18:14.74:0,15,224	0/0:21,1:22:0.23:0,0,363	0/0:23,0:23:2.97:0,3,20	0/1:16,2:18:55.54:56,0,222	0/0:14,0:14:23.91:0,24,210	0/0:23,0:21:11.04:0,11,129	0/0:15,0:15:1.40:0,1,59	0/0:15,0:15:13.15:0,13,91	0/0:8,0:8:6:0,6,69	0/0:11,0:11:24.03:0,24,296	0/1:16,1:16:20.13:20,0,233	0/1:18,2:20:99:110,0,235	0/0:17,0:17:22.24:0,22,207	0/1:21,0:19:1.25:1,0,102	0/0:14,0:14:9.03:0,9,135	0/1:50,2:52:75.15:75,0,696	0/0:24,0:24:6.66:0,7,40	0/0:22,0:23:11.75:0,12,101	0/0:17,0:17:3:0,3,25	0/0:12,0:11:3:0,3,26	0/0:28,0:26:18.06:0,18,249	0/0:16,0:16:33.07:0,33,444	0/0:6,0:5:2.22:0,2,7
chr10	73540168	.	T	TGTGTGTGA	2800.63	PASS	AB=0.941;AC=19;AF=0.339;AN=56;BaseQRankSum=9.131;DP=519;FS=10.000;HRun=0;HaplotypeScore=155.4765;InbreedingCoeff=0.8196;MQ=48.33;MQ0=25;MQRankSum=-7.464;QD=15.14;ReadPosRankSum=-5.452;VQSLOD=-0.6763;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:34:44.44:455,44,0	0/0:7,0:7:20.98:0,21,210	0/0:16,0:2:5.78:0,6,32	0/0:9,0:2:5.71:0,6,32	0/0:25,0:25:62.91:0,63,923	0/0:22,0:22:36.01:0,36,603	0/0:18,0:18:43.68:0,44,842	0/0:22,0:21:56.78:0,57,471	0/0:16,0:16:42.54:0,43,712	1/1:15,1:17:47.73:764,48,0	1/1:19,1:18:12.82:225,13,0	1/1:15,1:17:15.29:263,15,0	1/1:15,1:17:22.33:401,22,0	0/0:3,0:3:9:0,9,140	0/0:29,0:29:74.70:0,75,900	0/0:22,0:21:54.03:0,54,796	0/0:21,0:19:43.32:0,43,858	0/1:15,0:16:14.52:306,0,15	0/0:16,0:13:38.88:0,39,519	0/0:17,0:17:41.97:0,42,535	0/0:44,0:44:94.60:0,95,1711	1/1:20,0:20:12.67:121,13,0	1/1:17,0:16:15.86:199,16,0	1/1:14,0:13:6.02:178,6,0	1/1:6,0:6:3.01:91,3,0	0/0:16,0:15:42.05:0,42,596	0/0:26,0:26:77.95:0,78,1107	0/0:5,0:4:11.93:0,12,119
chr10	73540169	.	A	AAG	433.72	PASS	AB=0.947;AC=13;AF=0.232;AN=56;BaseQRankSum=8.342;DP=526;FS=12.634;HRun=0;HaplotypeScore=121.4728;InbreedingCoeff=0.6792;MQ=48.12;MQ0=26;MQRankSum=-3.796;QD=2.80;ReadPosRankSum=-2.975;VQSLOD=1.1406;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:35:3.39:3,0,175	0/0:7,0:7:21:0,21,243	0/0:16,0:2:6.02:0,6,75	0/0:9,0:2:6.02:0,6,70	0/0:25,0:25:56.56:0,57,659	0/0:21,0:21:32.73:0,33,387	0/0:18,0:18:39.12:0,39,487	0/0:24,0:21:54.63:0,55,658	0/0:16,0:16:28.92:0,29,383	0/0:19,0:19:5.97:0,6,152	1/1:20,0:18:2.87:18,3,0	1/1:14,3:17:2.67:17,3,0	1/1:10,6:17:23.21:278,23,0	0/0:3,0:3:9.03:0,9,113	0/0:29,0:29:75.21:0,75,911	0/0:22,0:21:44.93:0,45,582	0/0:23,0:21:32.60:0,33,340	0/0:15,0:15:12.97:0,13,118	0/0:16,0:13:21.07:0,21,263	0/0:17,0:17:39.08:0,39,487	0/0:44,0:44:78.95:0,79,959	1/1:9,10:21:6.91:89,7,0	1/1:14,4:17:16.22:176,16,0	0/1:13,2:13:0:0,0,0	0/1:7,0:6:0.18:0,0,0	0/0:16,0:15:39.12:0,39,478	0/0:26,0:26:69.19:0,69,837	0/0:5,0:4:8.76:0,9,87
chr10	73540179	.	GAGAC	G	550.53	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=11.559;DP=546;FS=0.000;HRun=0;HaplotypeScore=128.5076;InbreedingCoeff=0.7265;MQ=48.28;MQ0=25;MQRankSum=-5.877;QD=3.53;ReadPosRankSum=-5.922;VQSLOD=0.2870;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:41:7.34:0,7,891	0/0:9,0:8:24.07:0,24,560	0/0:16,0:2:6.02:0,6,130	0/0:9,0:2:6.02:0,6,106	0/0:27,0:27:54.35:0,54,1392	0/0:21,0:21:44.11:0,44,886	0/0:18,0:18:46.02:0,46,1059	0/0:34,0:31:87.43:0,87,1551	0/0:19,0:19:54.07:0,54,960	0/1:24,0:23:99:104,0,284	1/1:20,0:19:11.03:57,11,0	1/1:11,4:15:18.61:115,19,0	1/1:11,6:17:34.48:227,34,0	0/0:6,0:6:18.03:0,18,333	0/0:28,0:28:78.27:0,78,1957	0/0:20,0:19:45.09:0,45,1263	0/0:22,0:20:30.10:0,30,601	0/1:16,0:16:4.99:5,0,355	0/0:14,0:12:33.06:0,33,627	0/0:16,0:16:38.81:0,39,1017	0/0:41,0:41:99:0,100,2291	1/1:18,3:20:13.37:69,13,0	1/1:15,4:17:18.50:107,18,0	1/1:12,3:12:5.79:35,6,0	1/1:9,0:8:3.79:18,4,0	0/0:15,0:15:45.14:0,45,1135	0/0:24,0:24:69.22:0,69,1697	0/0:8,0:7:8.67:0,9,218
chr10	73540183	.	CAGAGACAG	C	1192.21	PASS	AB=1.000;AC=18;AF=0.346;AN=52;BaseQRankSum=9.053;DP=548;FS=1.486;HRun=0;HaplotypeScore=157.2867;InbreedingCoeff=0.7219;MQ=48.72;MQ0=24;MQRankSum=-6.388;QD=5.84;ReadPosRankSum=-5.365;VQSLOD=0.6858;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:47,0:45:4.44:4,0,1358	0/0:10,0:9:24.08:0,24,785	./.	./.	0/0:29,0:29:42.11:0,42,1313	0/0:23,0:23:30.10:0,30,904	0/0:19,0:19:28.34:0,28,831	0/0:35,0:32:29.91:0,30,331	0/0:18,0:18:24.04:0,24,672	1/1:10,15:24:39.10:683,39,0	1/1:12,7:18:7.14:101,7,0	1/1:14,0:14:9.81:82,10,0	1/1:17,0:17:17.81:143,18,0	0/0:6,0:6:15.04:0,15,492	0/0:29,0:29:54.14:0,54,1738	0/0:20,0:19:36.10:0,36,1130	0/0:18,0:18:8.99:0,9,93	0/1:18,0:18:30.84:202,0,31	0/0:12,0:11:18.05:0,18,535	0/0:15,0:15:33.08:0,33,1008	0/0:37,0:37:66.20:0,66,1913	1/1:20,0:19:6.87:40,7,0	1/1:19,0:17:6.92:29,7,0	1/1:15,0:13:4.76:18,5,0	1/1:4,5:8:3.01:71,3,0	0/0:16,0:16:36.11:0,36,1117	0/0:23,0:23:45.13:0,45,1573	0/0:7,0:6:12.04:0,12,353
chr10	73540189	.	CAG	C	1199.48	PASS	AB=0.947;AC=16;AF=0.286;AN=56;BaseQRankSum=10.458;DP=547;FS=4.601;HRun=0;HaplotypeScore=104.4540;InbreedingCoeff=0.7248;MQ=48.74;MQ0=24;MQRankSum=-5.459;QD=8.39;ReadPosRankSum=-3.742;VQSLOD=2.6502;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:27.33:0,27,883	0/0:10,0:9:27.09:0,27,463	0/0:17,0:4:12.01:0,12,163	0/0:10,0:3:9.02:0,9,115	0/0:27,0:27:68.95:0,69,1127	0/0:22,0:22:47.84:0,48,781	0/0:19,0:19:42.12:0,42,679	0/0:40,0:36:99:0,105,1629	0/0:17,0:17:38.55:0,39,702	0/1:22,0:21:99:263,0,230	1/1:17,0:16:6.85:69,7,0	1/1:7,4:11:15.01:178,15,0	1/1:11,7:18:12.18:334,12,0	0/0:6,0:6:18.06:0,18,319	0/0:29,0:29:81.25:0,81,1380	0/0:20,0:19:54.15:0,54,900	0/0:21,0:20:24.06:0,24,374	0/1:15,2:17:99:131,0,148	0/0:17,0:14:35.32:0,35,490	0/0:16,0:16:41.63:0,42,721	0/0:37,0:37:93.73:0,94,1592	1/1:16,3:18:14.36:153,14,0	1/1:12,4:14:14.68:156,15,0	1/1:7,9:13:5.98:67,6,0	1/1:7,0:7:3.01:33,3,0	0/0:18,0:18:48.16:0,48,830	0/0:24,0:24:68.72:0,69,1149	0/0:8,0:7:20.10:0,20,319
chr10	73540287	.	CTTG	C	4356.62	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.795;DP=556;FS=0.000;HRun=0;HaplotypeScore=91.6644;InbreedingCoeff=0.9978;MQ=81.85;MQ0=0;MQRankSum=-2.122;QD=50.08;ReadPosRankSum=5.153;VQSLOD=7.0181;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.22:0,75,1772	0/0:6,0:6:18.06:0,18,444	0/0:16,0:16:48.16:0,48,1138	0/0:21,0:21:60.17:0,60,1261	0/0:25,0:25:75.26:0,75,1848	0/0:22,0:22:66.21:0,66,1578	0/0:16,0:16:48.15:0,48,1133	0/0:45,0:45:99:0,135,3154	0/0:14,0:14:42.14:0,42,1035	0/0:15,0:15:42.14:0,42,1044	0/0:23,0:23:69.19:0,69,1646	1/1:0,15:15:36.12:670,36,0	1/1:0,16:16:42.14:783,42,0	0/0:12,0:12:36.12:0,36,888	0/0:15,0:15:45.15:0,45,1087	0/0:16,0:15:45.15:0,45,1084	0/0:27,0:27:75.26:0,75,1825	0/0:29,0:29:81.28:0,81,1994	0/0:26,0:26:78.27:0,78,1923	0/0:27,0:27:81.28:0,81,1975	0/0:19,0:19:51.16:0,51,1207	1/1:1,22:23:69.23:1263,69,0	1/1:0,18:18:51.17:914,51,0	1/1:0,15:15:39.13:726,39,0	0/0:18,0:18:50.92:0,51,1258	0/0:21,0:21:63.22:0,63,1552	0/0:19,0:19:57.20:0,57,1398	0/0:9,0:9:27.09:0,27,666
chr10	73541433	.	T	TCC	1661.44	PASS	AB=0.965;AC=39;AF=0.696;AN=56;BaseQRankSum=3.450;DP=429;FS=0.499;HRun=0;HaplotypeScore=198.7963;InbreedingCoeff=-0.1025;MQ=38.21;MQ0=20;MQRankSum=-3.651;QD=3.97;ReadPosRankSum=8.731;VQSLOD=1.6794;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:33,1:32:37.14:176,37,0	0/1:9,0:9:35.05:38,0,35	0/1:7,0:5:1.16:1,0,110	0/0:11,0:7:17.14:0,17,164	0/1:21,0:21:13.52:14,0,42	1/1:11,0:11:25.28:83,25,0	1/1:21,0:20:35.19:119,35,0	1/1:21,2:20:13.27:138,13,0	0/1:17,1:16:44.30:62,0,44	1/1:10,0:9:4.01:75,4,0	0/1:14,0:13:10.61:11,0,28	0/1:11,2:10:1.57:60,0,2	1/1:17,1:16:32.14:116,32,0	0/1:13,0:13:2.14:61,0,2	1/1:17,1:16:13.61:97,14,0	1/1:14,0:12:22.21:90,22,0	1/1:25,0:19:3.47:105,3,0	1/1:16,1:15:32.42:155,32,0	1/1:13,0:13:23:110,23,0	0/1:14,1:14:21.70:22,0,23	0/1:10,0:8:9.49:9,0,34	0/1:20,0:18:20.35:20,0,34	0/1:10,1:8:6.73:7,0,45	0/1:11,1:10:4.76:43,0,5	0/1:7,1:8:25.03:25,0,52	0/1:19,0:17:9.38:108,0,9	1/1:17,0:17:6.70:72,7,0	0/1:7,0:7:1.23:1,0,13
chr10	73541435	.	T	TCC	12964.70	PASS	AB=0.862;AC=53;AF=0.946;AN=56;BaseQRankSum=0.700;DP=373;FS=11.206;HRun=0;HaplotypeScore=133.2221;InbreedingCoeff=-0.0665;MQ=38.93;MQ0=20;MQRankSum=-0.095;QD=34.76;ReadPosRankSum=3.664;VQSLOD=6.1636;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:26:75.18:1129,75,0	1/1:0,4:5:15.05:220,15,0	0/1:7,0:5:44.64:45,0,48	0/1:9,0:7:18.50:32,0,18	1/1:2,17:21:53.17:730,53,0	1/1:0,11:11:33.11:545,33,0	1/1:0,19:18:54.18:886,54,0	1/1:1,12:13:33.11:536,33,0	0/1:4,12:15:20:584,0,20	1/1:2,8:9:27.08:418,27,0	1/1:1,9:9:21.74:325,22,0	1/1:2,7:8:24.08:393,24,0	1/1:2,15:16:43.01:660,43,0	1/1:2,10:13:39.13:587,39,0	1/1:0,15:14:36.12:579,36,0	1/1:2,10:10:27.09:432,27,0	1/1:9,16:19:43.51:651,44,0	1/1:3,10:13:33.09:534,33,0	1/1:3,8:11:30.10:470,30,0	1/1:3,9:12:29.57:425,30,0	1/1:3,4:5:9.03:147,9,0	1/1:3,15:16:39:592,39,0	1/1:4,5:7:18.06:273,18,0	1/1:1,8:9:17.31:275,17,0	1/1:3,4:8:20.96:272,21,0	1/1:2,13:13:39.13:602,39,0	1/1:0,14:15:36.12:576,36,0	1/1:0,3:3:3.01:50,3,0
chr10	73542491	.	A	AT	1928.20	PASS	AB=0.829;AC=20;AF=0.370;AN=54;BaseQRankSum=-0.134;DP=248;FS=5.467;HRun=7;HaplotypeScore=59.0967;InbreedingCoeff=0.5377;MQ=54.55;MQ0=2;MQRankSum=0.851;QD=20.30;ReadPosRankSum=1.896;VQSLOD=3.2755;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:33.02:376,33,0	0/0:2,0:2:2.95:0,3,19	0/1:5,1:3:3.29:3,0,24	0/1:5,0:4:14.10:14,0,46	0/0:18,0:18:48.08:0,48,463	0/0:16,0:16:39.06:0,39,374	0/0:2,0:2:6.01:0,6,58	0/0:25,0:23:57.09:0,57,550	0/0:4,0:4:9.01:0,9,87	1/1:4,12:16:42.12:495,42,0	0/1:2,5:7:10.92:163,0,11	1/1:0,1:1:3.01:36,3,0	1/1:2,2:4:6.02:72,6,0	0/0:4,0:4:9.01:0,9,87	0/0:3,0:3:6.01:0,6,58	0/0:8,0:8:21.03:0,21,202	0/0:24,0:22:57.97:0,58,549	1/1:0,15:15:45.14:543,45,0	0/0:17,0:14:36.06:0,36,347	0/0:9,0:9:24.04:0,24,231	0/0:2,0:2:3:0,3,29	1/1:0,2:2:3.01:36,3,0	./.	1/1:0,1:1:3.01:36,3,0	1/1:1,10:11:27.08:326,27,0	0/1:10,2:11:3.19:3,0,257	0/0:9,0:9:21.02:0,21,197	0/0:8,0:8:21.03:0,21,203
chr10	73543118	.	GT	G	1751.69	PASS	AB=0.891;AC=14;AF=0.250;AN=56;BaseQRankSum=8.614;DP=537;FS=0.000;HRun=11;HaplotypeScore=58.2470;InbreedingCoeff=0.7811;MQ=72.30;MQ0=0;MQRankSum=-0.344;QD=12.42;ReadPosRankSum=1.955;VQSLOD=3.3027;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:25:35.48:0,35,568	0/0:9,0:9:21.04:0,21,216	0/1:13,1:13:20.87:21,0,156	0/0:19,0:18:23.24:0,23,241	0/0:21,0:21:45.11:0,45,480	0/0:14,1:15:20.40:0,20,409	0/0:17,0:18:44.91:0,45,449	0/0:27,0:28:59.97:0,60,614	0/0:31,0:31:78.19:0,78,826	0/0:20,0:20:45.11:0,45,474	0/0:26,1:27:47.49:0,47,686	1/1:4,13:17:20.90:165,21,0	1/1:2,11:13:21.39:166,21,0	0/0:21,1:22:32.35:0,32,533	0/0:19,0:19:51.11:0,51,536	0/0:19,1:20:23.44:0,23,437	0/0:35,0:35:75.17:0,75,786	1/1:5,12:17:6.97:263,7,0	0/0:15,0:15:30.05:0,30,304	0/0:14,0:14:27.07:0,27,288	0/0:12,0:12:30.06:0,30,312	1/1:1,14:16:37.98:301,38,0	1/1:0,25:26:73.95:597,74,0	1/1:0,19:19:50.94:419,51,0	0/0:20,0:20:54.12:0,54,563	0/1:16,2:18:4.81:5,0,332	0/0:21,0:21:54.11:0,54,566	0/0:5,0:5:3.01:0,3,32
chr10	73543388	.	TACACACACACAC	T	1107.12	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=5.668;DP=545;FS=6.987;HRun=0;HaplotypeScore=168.5125;InbreedingCoeff=0.7723;MQ=60.09;MQ0=22;MQRankSum=-5.216;QD=14.96;ReadPosRankSum=-0.076;VQSLOD=2.0074;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:21:14.58:0,15,347	0/0:8,0:8:18.06:0,18,940	./.	0/0:43,0:12:3.77:0,4,238	0/0:25,0:26:39.13:0,39,1935	0/0:14,0:16:18.04:0,18,709	0/0:19,0:33:51.18:0,51,2401	0/0:12,0:10:9.03:0,9,397	0/0:14,0:14:18.06:0,18,945	0/0:25,0:24:42.14:0,42,1643	0/0:7,0:11:11.61:0,12,480	1/1:13,7:19:21.07:726,21,0	./.	0/0:17,0:17:30.10:0,30,1404	0/0:20,0:22:39.13:0,39,1719	0/0:6,0:7:18.06:0,18,956	0/0:27,0:32:63.22:0,63,3173	0/0:11,0:14:14.04:0,14,369	0/0:19,0:20:18.02:0,18,728	0/0:20,0:22:41.61:0,42,1824	0/0:25,0:25:36.12:0,36,1855	1/1:15,5:20:3.01:104,3,0	1/1:11,7:19:9.03:225,9,0	1/1:10,3:13:6.02:188,6,0	0/0:10,0:9:6.02:0,6,237	0/0:21,0:21:45.15:0,45,1956	0/0:16,0:19:39.13:0,39,1887	0/0:4,0:4:9.03:0,9,523
chr10	73543778	.	A	AT	5908.77	PASS	AB=0.536;AC=19;AF=0.339;AN=56;BaseQRankSum=-11.534;DP=626;FS=15.514;HRun=9;HaplotypeScore=60.5557;InbreedingCoeff=0.9225;MQ=72.23;MQ0=0;MQRankSum=-0.034;QD=25.80;ReadPosRankSum=1.877;VQSLOD=4.0889;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,36:42:79.48:1065,79,0	0/0:11,0:11:29.98:0,30,257	0/0:27,0:24:33.13:0,33,416	0/0:14,0:14:14.14:0,14,93	0/0:30,0:30:80.95:0,81,695	0/0:22,0:22:59.99:0,60,521	0/0:16,0:16:35.97:0,36,312	0/0:32,1:33:26.78:0,27,461	0/0:16,0:16:41.97:0,42,361	1/1:1,26:27:72.19:796,72,0	1/1:2,12:16:38.77:393,39,0	1/1:4,20:24:5.04:512,5,0	1/1:0,20:20:54.15:597,54,0	0/0:24,0:24:62.97:0,63,547	0/0:19,0:19:53.95:0,54,463	0/0:22,0:22:53.98:0,54,469	0/0:32,0:32:89.95:0,90,779	1/1:1,17:18:45.12:498,45,0	0/0:22,0:23:46.99:0,47,394	0/0:32,0:32:83.93:0,84,720	0/0:9,0:9:23.99:0,24,208	1/1:2,14:17:21.91:453,22,0	0/1:4,26:30:3.37:632,0,3	1/1:1,19:20:51.14:564,51,0	1/1:1,14:14:36.10:398,36,0	0/0:30,0:30:86.98:0,87,755	0/0:18,0:17:50.98:0,51,443	0/0:17,0:17:35.96:0,36,312
chr10	73544174	.	AAT	A	586.73	PASS	AB=1.000;AC=9;AF=0.180;AN=50;BaseQRankSum=4.656;DP=164;FS=70.390;HRun=0;HaplotypeScore=29.0743;InbreedingCoeff=0.5439;MQ=71.66;MQ0=2;MQRankSum=-0.326;QD=13.04;ReadPosRankSum=2.380;VQSLOD=0.9786;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:30.06:0,30,437	0/0:4,0:4:12.03:0,12,179	./.	0/0:7,0:4:5.89:0,6,60	0/0:7,0:7:9.01:0,9,122	0/0:1,0:1:2.99:0,3,24	0/0:6,0:6:18:0,18,196	0/0:13,0:13:36.12:0,36,566	0/0:2,0:2:6.02:0,6,103	1/1:0,9:9:18.06:225,18,0	1/1:4,5:9:9.03:115,9,0	./.	0/0:6,0:6:9.02:0,9,119	0/0:2,0:2:6.02:0,6,98	./.	0/0:2,0:2:6.02:0,6,98	0/0:11,0:11:27.07:0,27,416	1/1:10,4:13:24.07:296,24,0	0/0:6,0:6:15.05:0,15,251	0/0:8,0:8:15.02:0,15,190	0/0:1,0:1:2.99:0,3,24	0/0:2,0:2:3.01:0,3,51	0/0:11,0:11:15.02:0,15,195	0/0:3,0:3:3.01:0,3,51	1/1:6,2:8:6.01:65,6,0	0/1:5,0:5:29.69:30,0,94	0/0:3,0:3:9.03:0,9,138	0/0:5,0:5:15.05:0,15,227
chr10	73544189	.	GTA	G	306.08	PASS	AB=1.000;AC=7;AF=0.194;AN=36;BaseQRankSum=4.545;DP=121;FS=37.959;HRun=0;HaplotypeScore=26.1556;InbreedingCoeff=0.3806;MQ=60.17;MQ0=6;MQRankSum=-0.614;QD=9.87;ReadPosRankSum=0.764;VQSLOD=1.5816;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:12.04:0,12,182	0/0:3,0:3:9.03:0,9,140	./.	0/0:5,0:3:2.04:0,2,6	0/0:2,0:2:3.01:0,3,46	./.	0/0:2,0:2:3.01:0,3,47	0/0:14,0:11:18.06:0,18,287	0/0:2,0:2:6.02:0,6,93	1/1:8,0:8:12.03:140,12,0	1/1:4,4:8:6.02:73,6,0	./.	./.	0/0:2,0:2:3.01:0,3,46	./.	0/0:2,0:2:3.01:0,3,46	0/0:9,0:9:15.05:0,15,222	1/1:9,3:10:17.94:182,18,0	0/0:6,0:6:6.01:0,6,75	./.	./.	0/0:1,0:1:3.01:0,3,46	0/0:6,1:7:3.01:0,3,46	0/0:1,0:1:3.01:0,3,46	./.	0/1:3,0:3:28.34:28,0,88	./.	./.
chr10	73544568	.	GT	G	30.44	PASS	AB=0.909;AC=11;AF=0.196;AN=56;BaseQRankSum=13.162;DP=550;FS=2.962;HRun=4;HaplotypeScore=96.2550;InbreedingCoeff=0.5271;MQ=70.10;MQ0=1;MQRankSum=-10.338;QD=0.22;ReadPosRankSum=1.863;VQSLOD=-0.4691;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:32.74:33,0,80	0/0:5,0:5:15.05:0,15,209	0/1:20,12:25:13.10:13,0,316	0/0:14,4:14:15.04:0,15,221	0/0:23,0:23:69.23:0,69,965	0/0:19,0:19:57.19:0,57,794	0/0:18,0:18:54.18:0,54,753	0/0:24,0:24:66.21:0,66,901	0/0:10,0:10:27.09:0,27,376	0/0:33,0:33:96.31:0,96,1310	0/0:14,0:14:39.13:0,39,546	1/1:16,0:16:2.05:21,2,0	0/1:11,0:11:11.12:11,0,45	0/0:17,0:17:48.15:0,48,655	0/0:35,0:35:99:0,99,1331	0/0:18,0:18:54.17:0,54,740	0/0:21,0:21:60.19:0,60,824	0/0:29,0:28:81.25:0,81,1116	0/0:20,0:20:60.15:0,60,814	0/0:9,0:9:27.09:0,27,378	0/0:18,0:18:48.15:0,48,655	1/1:15,1:17:17.92:48,18,0	1/1:16,0:16:1.05:26,1,0	1/1:17,0:17:10.40:28,10,0	0/0:16,0:16:45.14:0,45,614	0/0:22,0:22:66.22:0,66,918	0/0:39,0:39:99:0,114,1527	0/0:5,0:5:15.05:0,15,210
chr10	73544570	.	TTTCTCTGTATAAC	T	7726.28	PASS	AB=0.550;AC=11;AF=0.196;AN=56;BaseQRankSum=11.644;DP=551;FS=3.753;HRun=0;HaplotypeScore=197.7296;InbreedingCoeff=0.8795;MQ=69.17;MQ0=1;MQRankSum=-11.592;QD=75.75;ReadPosRankSum=2.127;VQSLOD=4.8283;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:27:51.18:2037,51,0	0/0:5,0:5:15.05:0,15,980	0/0:31,0:24:53.55:0,54,2322	0/0:22,0:16:32.26:0,32,1652	0/0:25,0:25:72.25:0,72,4642	0/0:20,0:20:57.18:0,57,3351	0/0:19,0:19:57.16:0,57,2988	0/0:22,0:22:63.20:0,63,3085	0/0:10,0:10:30.10:0,30,1881	0/0:33,0:33:93.31:0,93,5718	0/0:13,0:13:39.13:0,39,2442	1/1:0,15:15:30.10:1178,30,0	0/1:2,9:11:99:814,0,169	0/0:17,0:17:48.16:0,48,3014	0/0:35,0:35:99:0,99,6219	0/0:19,0:19:57.18:0,57,3437	0/0:20,0:20:60.21:0,60,3858	0/0:28,0:27:78.24:0,78,4341	0/0:21,0:21:63.21:0,63,3822	0/0:10,0:10:30.10:0,30,1936	0/0:16,0:16:45.15:0,45,2740	1/1:2,14:16:36.08:1338,36,0	1/1:2,14:16:36.12:1435,36,0	1/1:1,16:17:23.81:925,24,0	0/0:16,0:16:45.15:0,45,2706	0/0:22,0:22:63.16:0,63,3272	0/0:40,0:40:99:0,111,6796	0/0:5,0:5:15.01:0,15,507
chr10	73545219	.	C	CTTT	1199.92	PASS	AB=0.952;AC=19;AF=0.339;AN=56;BaseQRankSum=3.509;DP=396;FS=3.082;HRun=10;HaplotypeScore=74.9881;InbreedingCoeff=0.7913;MQ=69.27;MQ0=10;MQRankSum=-1.811;QD=9.30;ReadPosRankSum=-2.509;VQSLOD=-0.7220;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:19:6.83:7,0,142	0/0:5,0:5:12.02:0,12,141	0/0:25,0:13:23.03:0,23,247	0/0:15,0:7:11.81:0,12,117	0/0:24,0:23:46.22:0,46,515	0/0:16,0:16:33.03:0,33,400	0/0:18,0:18:26.60:0,27,306	0/0:24,0:24:39.02:0,39,463	0/0:8,0:8:18:0,18,192	1/1:5,12:16:33.08:482,33,0	1/1:10,8:16:27.02:409,27,0	1/1:3,0:3:0.47:1,0,0	1/1:6,0:9:12.91:56,13,0	0/0:5,0:5:2.47:0,2,36	0/0:10,0:10:17.93:0,18,217	0/0:11,0:11:5.86:0,6,72	0/0:28,0:28:66.93:0,67,772	1/1:2,0:12:14.03:90,14,0	0/0:19,0:19:26.63:0,27,291	0/0:11,0:11:27.07:0,27,316	0/0:10,0:9:20.98:0,21,224	1/1:1,0:8:3.02:7,3,0	1/1:6,0:8:11.06:56,11,0	1/1:7,0:13:10.32:38,10,0	1/1:7,12:19:15.05:244,15,0	0/0:18,0:17:22.88:0,23,395	0/0:16,0:16:22.96:0,23,263	0/0:4,0:4:12.02:0,12,133
chr10	73545499	.	AGTGTGTGTGTGTGTGT	A	1534.46	PASS	AB=0.714;AC=8;AF=0.148;AN=54;BaseQRankSum=5.027;DP=560;FS=0.889;HRun=0;HaplotypeScore=204.5386;InbreedingCoeff=0.2334;MQ=51.85;MQ0=23;MQRankSum=-5.144;QD=14.34;ReadPosRankSum=-2.491;VQSLOD=2.4380;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:33:33.11:0,33,1151	0/0:9,0:8:15.52:0,16,860	0/0:34,0:10:3.01:0,3,42	./.	0/0:26,0:26:22.76:0,23,851	0/0:16,0:14:20.37:0,20,1049	0/0:14,0:12:15.51:0,16,589	0/0:18,0:17:9.01:0,9,91	0/0:9,0:9:21.54:0,22,521	0/0:23,0:32:41.07:0,41,672	0/0:12,0:21:13.77:0,14,133	0/1:9,8:17:85.79:312,0,86	0/1:4,12:17:27.42:488,0,27	0/0:11,0:10:21.06:0,21,786	0/0:16,0:16:29.62:0,30,1275	0/0:12,0:11:27.08:0,27,1456	0/0:29,0:31:57.18:0,57,2549	1/1:9,0:9:9.03:169,9,0	0/0:19,0:17:24.06:0,24,722	0/0:13,0:13:11.06:0,11,475	0/0:42,0:40:77.61:0,78,3438	1/1:11,16:26:0.33:189,0,0	0/1:5,8:13:32.49:290,0,32	0/1:23,0:21:41.46:217,0,41	0/0:15,0:20:21.92:0,22,367	0/0:22,0:22:39.12:0,39,1236	0/0:11,0:13:27.09:0,27,688	0/0:9,0:7:15.05:0,15,933
chr10	73547314	.	CTT	C	8701.73	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.503;DP=632;FS=18.633;HRun=4;HaplotypeScore=79.6658;InbreedingCoeff=0.9975;MQ=85.91;MQ0=1;MQRankSum=-2.449;QD=40.66;ReadPosRankSum=4.014;VQSLOD=3.4700;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,37:38:99:1502,102,0	0/0:6,0:6:18.06:0,18,335	0/0:21,0:21:60.20:0,60,1068	0/0:21,0:21:63.19:0,63,1098	0/0:24,0:24:69.23:0,69,1260	0/0:19,0:19:54.19:0,54,1012	0/0:18,0:18:48.16:0,48,899	0/0:26,0:26:75.26:0,75,1396	0/0:19,0:19:54.16:0,54,950	1/1:2,27:29:81.27:1192,81,0	1/1:0,14:14:36.12:530,36,0	1/1:0,25:24:69.23:1016,69,0	1/1:0,14:14:39.13:574,39,0	0/0:17,0:17:51.17:0,51,955	0/0:29,0:29:87.30:0,87,1622	0/0:18,0:18:54.17:0,54,981	0/0:31,0:31:90.31:0,90,1676	1/1:0,10:10:30.10:442,30,0	0/0:26,0:26:72.22:0,72,1282	0/0:27,0:27:81.28:0,81,1509	0/0:55,0:55:99:0,166,3011	1/1:0,24:24:66.22:972,66,0	1/1:0,21:21:57.19:839,57,0	1/1:0,20:20:57.19:839,57,0	1/1:0,19:19:54.18:795,54,0	0/0:28,0:28:84.29:0,84,1558	0/0:27,0:27:81.28:0,81,1500	0/0:6,0:6:18.06:0,18,321
chr10	73548111	.	C	CTCTCTCTCTT	5086.98	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=10.131;DP=533;FS=4.493;HRun=0;HaplotypeScore=183.5196;InbreedingCoeff=0.8503;MQ=63.52;MQ0=22;MQRankSum=-7.747;QD=28.10;ReadPosRankSum=-1.112;VQSLOD=3.6258;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:28:80.77:84,0,81	0/0:5,0:5:15.04:0,15,336	0/0:36,0:15:13.61:0,14,168	0/0:49,0:20:11.23:0,11,180	0/0:16,0:15:26.75:0,27,548	0/0:14,0:14:24.03:0,24,495	0/0:13,0:13:32.78:0,33,688	0/0:33,0:32:35.85:0,36,581	0/0:14,0:14:24.08:0,24,701	1/1:24,0:24:43.22:482,43,0	1/1:15,0:15:3.95:80,4,0	1/1:10,6:16:31.65:1249,32,0	1/1:7,5:12:24.52:927,25,0	0/0:21,0:21:24.69:0,25,512	0/0:14,0:14:27.09:0,27,844	0/0:14,0:14:25.34:0,25,627	0/0:15,0:15:36.07:0,36,908	1/1:8,0:7:12.88:73,13,0	0/0:12,0:11:12:0,12,156	0/0:21,0:18:26.82:0,27,703	0/0:17,0:17:32.98:0,33,544	1/1:18,2:21:47.98:1241,48,0	1/1:23,2:22:27.38:593,27,0	1/1:14,1:11:20.22:134,20,0	1/1:16,0:16:18.37:224,18,0	0/0:12,0:10:3.82:0,4,50	0/0:28,0:27:62.88:0,63,1581	0/0:16,0:14:24.03:0,24,528
chr10	73548122	.	C	CTCT	232.21	PASS	AB=0.971;AC=8;AF=0.143;AN=56;BaseQRankSum=6.933;DP=438;FS=22.993;HRun=0;HaplotypeScore=106.2472;InbreedingCoeff=0.0041;MQ=65.78;MQ0=18;MQRankSum=-3.235;QD=2.42;ReadPosRankSum=2.787;VQSLOD=0.3443;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,4:27:41.74:197,0,42	0/0:5,0:5:15.02:0,15,225	0/0:36,0:17:36.50:0,37,369	0/0:41,0:19:26.51:0,27,289	0/0:11,0:10:18.05:0,18,305	0/0:10,0:10:19.88:0,20,319	0/0:13,0:13:35.84:0,36,622	0/0:20,0:19:41.67:0,42,538	0/0:12,0:12:30.54:0,31,467	0/1:12,0:12:8.35:8,0,194	1/1:12,0:12:2.56:29,3,0	0/1:12,0:12:37.55:38,0,66	0/1:11,0:11:41.16:53,0,41	0/0:19,0:19:37.92:0,38,585	0/0:13,0:13:30.09:0,30,485	0/0:12,0:12:27.01:0,27,469	0/0:16,0:16:39.58:0,40,603	0/0:5,0:4:2.85:0,3,92	0/0:10,0:9:9.02:0,9,138	0/0:19,0:16:30.09:0,30,452	0/0:12,0:12:24.51:0,25,354	0/1:8,0:8:25.68:26,0,64	0/0:19,0:17:6.26:0,6,162	0/0:13,0:10:17.78:0,18,207	0/1:13,0:13:10.19:10,0,156	0/0:11,0:9:5.15:0,5,80	0/0:29,0:28:72.17:0,72,1094	0/0:16,0:14:30.09:0,30,510
chr10	73548129	.	C	CCA	981.05	PASS	AB=0.800;AC=18;AF=0.321;AN=56;BaseQRankSum=8.945;DP=480;FS=0.595;HRun=0;HaplotypeScore=127.9521;InbreedingCoeff=0.7640;MQ=67.07;MQ0=11;MQRankSum=-4.557;QD=6.02;ReadPosRankSum=2.956;VQSLOD=3.0153;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:8.30:0,8,243	0/0:6,0:6:9.01:0,9,99	0/0:33,0:17:18.18:0,18,266	0/1:34,0:19:5.35:5,0,123	0/0:19,0:18:36.02:0,36,372	0/0:8,0:8:9.02:0,9,120	0/0:12,0:12:27.08:0,27,352	0/0:16,0:15:38.91:0,39,407	0/0:17,0:17:24.01:0,24,251	0/1:4,8:12:14.01:177,0,14	1/1:12,10:22:5.92:49,6,0	1/1:2,0:13:23.63:198,24,0	1/1:1,0:10:20.89:187,21,0	0/0:19,0:19:33.99:0,34,383	0/0:13,0:13:18.02:0,18,201	0/0:21,0:21:21.04:0,21,267	0/0:20,0:20:36:0,36,390	1/1:4,0:7:3.89:35,4,0	0/0:12,0:11:24.03:0,24,240	0/0:25,0:24:23.97:0,24,240	0/0:11,0:11:23.95:0,24,240	1/1:0,0:11:14.44:110,14,0	1/1:6,0:20:25.50:167,25,0	1/1:1,0:11:13.80:70,14,0	1/1:8,12:20:8.98:178,9,0	0/0:21,0:19:35.25:0,35,326	0/0:24,0:23:43.98:0,44,511	0/0:18,0:18:29.90:0,30,333
chr10	73551943	.	AAAAG	A	6199.84	PASS	AB=0.595;AC=19;AF=0.339;AN=56;BaseQRankSum=13.548;DP=641;FS=3.964;HRun=0;HaplotypeScore=105.4079;InbreedingCoeff=0.8932;MQ=58.48;MQ0=4;MQRankSum=2.190;QD=27.31;ReadPosRankSum=4.948;VQSLOD=4.7207;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,31:39:38.43:1069,38,0	0/0:9,0:9:15.05:0,15,367	0/0:19,0:8:14.97:0,15,238	0/0:19,0:8:5:0,5,147	0/0:34,0:34:78.27:0,78,1870	0/0:21,0:21:51.16:0,51,1149	0/0:29,0:29:81.28:0,81,1864	0/0:21,0:21:42.13:0,42,862	0/0:23,0:23:54.18:0,54,1277	1/1:4,19:23:54.18:884,54,0	1/1:5,17:22:39.13:627,39,0	1/1:4,10:14:15.05:251,15,0	1/1:4,17:21:33.11:554,33,0	0/0:15,0:15:42.14:0,42,1023	0/0:20,0:21:48.13:0,48,1057	0/0:23,0:23:60.21:0,60,1483	0/0:37,0:36:87.26:0,87,1849	0/1:8,17:25:38.26:519,0,38	0/0:22,0:21:48.16:0,48,1121	0/0:15,0:15:39.13:0,39,895	0/0:16,0:16:42.12:0,42,908	1/1:2,20:22:48.12:748,48,0	1/1:5,14:19:20.82:339,21,0	1/1:3,23:27:49.48:855,49,0	1/1:4,11:15:21.07:353,21,0	0/0:41,0:41:90.31:0,90,2177	0/0:30,0:29:77.25:0,77,1697	0/0:18,0:18:45.15:0,45,1009
chr10	73552232	.	A	AG	116.72	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.915;DP=538;FS=1.433;HRun=0;HaplotypeScore=76.4131;InbreedingCoeff=0.9141;MQ=63.05;MQ0=9;MQRankSum=-1.381;QD=3.43;ReadPosRankSum=0.035;VQSLOD=3.1988;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,30:33:18.02:207,18,0	0/0:8,0:8:12.08:0,12,111	0/0:40,0:13:34.86:0,35,274	0/0:19,0:9:19.46:0,19,170	0/0:27,0:27:66.32:0,66,561	0/0:15,0:15:28.99:0,29,240	0/0:22,0:21:49.91:0,50,460	0/0:22,0:21:40.34:0,40,328	0/0:18,0:18:37.27:0,37,403	0/0:27,0:27:56.09:0,56,438	0/0:10,0:10:23.76:0,24,171	0/0:19,0:19:44.83:0,45,419	0/0:14,0:14:11.84:0,12,133	0/0:16,0:16:42.27:0,42,354	0/0:18,0:18:40.60:0,41,413	0/0:16,0:16:45.86:0,46,457	0/0:25,0:25:54.72:0,55,515	0/0:13,0:12:24.05:0,24,165	0/0:17,0:16:37.64:0,38,318	0/0:20,0:20:43.46:0,43,349	0/0:11,0:10:18.76:0,19,128	0/0:15,0:15:33.60:0,34,295	0/0:14,0:14:28.23:0,28,229	0/0:20,0:20:30:0,30,276	0/0:13,0:13:30.15:0,30,232	0/0:25,0:24:59.23:0,59,493	0/0:24,0:24:50.23:0,50,407	0/0:16,0:16:24.64:0,25,301
chr10	73553037	.	A	ACCACC	1046.81	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.897;DP=559;FS=1.104;HRun=0;HaplotypeScore=106.5655;InbreedingCoeff=0.9978;MQ=89.63;MQ0=0;MQRankSum=-6.072;QD=55.10;ReadPosRankSum=1.162;VQSLOD=4.1559;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:19:39.13:1142,39,0	0/0:14,0:14:42.14:0,42,934	0/0:27,0:27:71.27:0,71,1529	0/0:19,0:19:54.18:0,54,1193	0/0:22,0:22:66.23:0,66,1464	0/0:18,0:18:54.17:0,54,1192	0/0:17,0:17:48.15:0,48,1052	0/0:46,0:46:99:0,132,3023	0/0:20,0:20:54.16:0,54,1186	0/0:32,0:32:93.32:0,93,2140	0/0:15,0:15:39.13:0,39,908	0/0:12,0:12:36.12:0,36,838	0/0:19,0:19:57.20:0,57,1307	0/0:24,0:24:72.25:0,72,1654	0/0:16,0:16:48.15:0,48,1018	0/0:19,0:19:57.20:0,57,1305	0/0:20,0:20:60.15:0,60,1302	0/0:10,0:10:30.10:0,30,699	0/0:27,0:27:78.24:0,78,1709	0/0:14,0:14:39.13:0,39,884	0/0:22,0:22:63.22:0,63,1468	0/0:13,0:13:39.12:0,39,861	0/0:20,0:20:57.18:0,57,1261	0/0:11,0:11:33.11:0,33,734	0/0:18,0:18:54.19:0,54,1257	0/0:22,0:22:66.23:0,66,1495	0/0:34,0:34:99:0,99,2248	0/0:9,0:9:27.09:0,27,629
chr10	73553364	.	CAT	C	201.69	PASS	AB=0.979;AC=19;AF=0.339;AN=56;BaseQRankSum=9.420;DP=567;FS=17.650;HRun=0;HaplotypeScore=99.8888;InbreedingCoeff=0.6288;MQ=56.56;MQ0=19;MQRankSum=-5.606;QD=1.05;ReadPosRankSum=0.647;VQSLOD=0.8152;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:28,2:28:32.83:33,0,122	0/0:9,0:9:18.06:0,18,286	0/0:29,0:6:12.73:0,13,147	0/0:44,0:4:0.47:0,0,1	0/0:27,1:27:34.71:0,35,1022	0/0:27,0:27:66.21:0,66,1008	0/1:8,0:8:11.95:12,0,222	0/0:42,0:40:84.26:0,84,1199	0/0:9,0:9:24.08:0,24,381	0/1:17,0:17:27.45:33,0,27	1/1:29,0:29:11.20:54,11,0	1/1:15,0:15:11.19:54,11,0	1/1:12,0:12:5.54:25,6,0	0/0:17,0:16:45.15:0,45,713	0/0:17,0:17:45.14:0,45,697	0/0:14,0:14:36.10:0,36,542	0/0:26,0:24:57.96:0,58,919	1/1:19,0:19:8.52:41,9,0	0/0:21,0:21:48.08:0,48,718	0/0:16,0:16:39.13:0,39,615	0/0:5,0:5:15.05:0,15,227	1/1:5,0:5:0.89:2,1,0	1/1:24,0:24:13.58:63,14,0	1/1:11,0:11:5.60:27,6,0	1/1:22,0:22:8.44:40,8,0	0/0:30,1:31:40.72:0,41,1099	0/0:25,1:26:33.84:0,34,1000	0/0:14,0:14:39.13:0,39,591
chr10	73553372	.	TATATATAC	T	2357.02	PASS	AC=18;AF=0.333;AN=54;BaseQRankSum=9.115;DP=554;FS=9.199;HRun=0;HaplotypeScore=139.3532;InbreedingCoeff=0.8790;MQ=55.75;MQ0=19;MQRankSum=-4.462;QD=16.84;ReadPosRankSum=0.925;VQSLOD=2.5156;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:30:13.87:0,14,844	0/0:9,0:9:24.03:0,24,621	0/0:29,0:6:6.02:0,6,67	./.	0/0:28,0:27:78.12:0,78,2238	0/0:26,0:26:69.07:0,69,1748	0/0:8,0:8:24.05:0,24,650	0/0:39,0:37:99:0,102,1389	0/0:8,0:8:24.05:0,24,763	1/1:1,15:16:39.04:613,39,0	1/1:0,24:24:11.73:336,12,0	1/1:0,16:16:12.04:337,12,0	1/1:1,13:14:5.94:166,6,0	0/0:17,0:16:45.09:0,45,1380	0/0:20,0:20:60.14:0,60,1604	0/0:16,0:16:45.14:0,45,1512	0/0:26,0:24:71.95:0,72,1582	1/1:1,13:14:9.03:252,9,0	0/0:19,0:19:48.01:0,48,1106	0/0:16,0:16:48.06:0,48,1239	0/0:5,0:5:14.99:0,15,231	1/1:0,5:5:0.89:2,1,0	1/1:1,22:23:15.92:418,16,0	1/1:0,9:9:6.02:168,6,0	1/1:1,18:19:9.03:253,9,0	0/0:29,0:29:84.20:0,84,2212	0/0:28,0:28:84.16:0,84,2120	0/0:14,0:14:39.07:0,39,813
chr10	73555478	.	T	TAA	1216.91	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-3.426;DP=509;FS=1.405;HRun=10;HaplotypeScore=63.6146;InbreedingCoeff=0.9391;MQ=63.62;MQ0=0;MQRankSum=0.937;QD=24.83;ReadPosRankSum=0.022;VQSLOD=3.2937;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:83.85:0,84,821	0/0:9,0:9:17.37:0,17,208	0/0:10,0:9:14.81:0,15,120	0/0:7,0:5:11.79:0,12,101	0/0:27,0:27:63.07:0,63,641	0/0:18,0:18:39:0,39,390	0/0:15,0:15:42.09:0,42,427	0/0:36,0:36:81.14:0,81,823	0/0:14,0:14:30.05:0,30,305	0/0:19,0:19:41.39:0,41,399	0/0:24,0:25:53.82:0,54,522	1/1:2,9:12:20.56:277,21,0	1/1:3,10:13:30.10:442,30,0	0/0:15,0:15:42.08:0,42,420	0/0:23,0:23:51.07:0,51,519	0/0:13,0:13:36.07:0,36,366	0/0:21,0:21:57.09:0,57,571	0/0:24,0:24:35.05:0,35,502	0/0:27,0:26:69.07:0,69,677	0/0:26,0:28:77.63:0,78,749	0/0:12,0:12:18.01:0,18,183	1/1:0,9:9:27.05:369,27,0	1/1:4,6:11:18.05:250,18,0	1/1:0,4:4:3.01:45,3,0	0/0:19,0:19:45.05:0,45,451	0/0:22,0:22:57.09:0,57,564	0/0:29,0:29:72.12:0,72,732	0/0:12,0:12:30.02:0,30,305
chr10	73555682	.	GT	G	7392.80	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.055;DP=620;FS=0.313;HRun=3;HaplotypeScore=64.0737;InbreedingCoeff=0.9970;MQ=68.83;MQ0=1;MQRankSum=-1.158;QD=34.55;ReadPosRankSum=4.139;VQSLOD=5.3114;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,55:57:99:1930,156,0	0/0:9,0:9:24.08:0,24,341	0/0:22,0:20:57.19:0,57,789	0/0:20,0:19:54.10:0,54,705	0/0:18,0:18:45.14:0,45,626	0/0:19,0:19:57.18:0,57,801	0/0:21,0:21:63.16:0,63,849	0/0:37,0:37:99:0,105,1490	0/0:21,0:21:57.19:0,57,819	1/1:1,24:25:72.23:891,72,0	1/1:0,5:5:15.05:186,15,0	1/1:0,20:20:54.17:669,54,0	1/1:0,21:21:60.19:743,60,0	0/0:21,0:21:63.20:0,63,882	0/0:38,0:38:99:0,108,1504	0/0:21,0:21:60.20:0,60,864	0/0:20,0:20:60.19:0,60,839	1/1:1,26:27:75.24:930,75,0	0/0:20,0:20:54.16:0,54,741	0/0:11,0:11:27.07:0,27,371	0/0:32,0:32:96.32:0,96,1381	1/1:0,9:9:27.08:334,27,0	1/1:0,14:14:39.12:483,39,0	1/1:0,24:24:66.21:818,66,0	1/1:1,11:12:33.10:409,33,0	0/0:24,1:25:35.05:0,35,952	0/0:34,0:34:99:0,99,1417	0/0:17,0:17:51.14:0,51,696
chr10	73555939	.	A	AC	572.39	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.499;DP=512;FS=2.861;HRun=6;HaplotypeScore=60.1306;InbreedingCoeff=0.9366;MQ=72.93;MQ0=0;MQRankSum=-0.752;QD=22.01;ReadPosRankSum=-2.040;VQSLOD=2.4663;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,126,1287	0/0:8,0:8:24.05:0,24,245	0/0:18,0:18:9.02:0,9,161	0/0:19,0:18:20.80:0,21,220	0/0:26,0:26:78.16:0,78,787	0/0:18,0:18:54.12:0,54,550	0/0:24,0:24:57.11:0,57,573	0/0:13,0:13:24.02:0,24,234	0/0:19,0:19:57.13:0,57,581	1/1:2,9:11:27.08:330,27,0	1/1:1,4:5:6.02:74,6,0	0/0:12,0:12:36.08:0,36,367	0/0:18,0:18:54.12:0,54,550	0/0:19,0:19:57.13:0,57,581	0/0:16,0:16:42.09:0,42,428	0/0:15,0:15:39.09:0,39,398	0/0:34,0:33:93.16:0,93,931	0/0:17,0:17:45.10:0,45,458	0/0:16,0:16:36.08:0,36,367	0/0:15,0:15:39.06:0,39,389	0/0:29,0:29:84.18:0,84,850	0/0:12,0:12:36.07:0,36,362	0/0:14,0:14:39.07:0,39,388	0/0:26,0:26:69.15:0,69,704	1/1:2,8:10:24.08:302,24,0	0/0:22,0:22:60.12:0,60,605	0/0:18,0:18:51.11:0,51,520	0/0:10,0:10:30.07:0,30,304
chr10	73556335	.	C	CGA	693.35	PASS	AB=0.918;AC=17;AF=0.340;AN=50;BaseQRankSum=-4.808;DP=422;FS=15.677;HRun=0;HaplotypeScore=79.6641;InbreedingCoeff=0.2675;MQ=53.35;MQ0=10;MQRankSum=2.895;QD=3.67;ReadPosRankSum=-1.355;VQSLOD=0.7544;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:8.24:0,8,44	0/1:3,1:5:20.77:38,0,21	./.	./.	0/1:11,5:16:8.57:38,0,9	0/0:7,0:10:11.50:0,11,62	0/0:13,0:13:8.52:0,9,42	1/1:23,0:22:5.07:23,5,0	0/1:11,0:10:49.05:76,0,49	0/0:13,0:18:4.66:0,5,19	0/0:8,0:13:5.68:0,6,28	0/1:6,0:8:0:0,0,0	0/0:18,0:18:8.56:0,9,43	0/1:11,0:12:8.15:17,0,8	0/0:14,0:17:11.69:0,12,92	1/1:7,1:15:9.01:96,9,0	0/0:24,0:24:14.98:0,15,133	0/0:14,0:20:16.68:0,17,82	0/1:19,0:18:22.30:78,0,22	1/1:8,5:13:2.61:44,3,0	1/1:17,0:16:3.87:108,4,0	0/0:9,0:11:5.68:0,6,28	0/0:8,0:12:0.47:0,0,1	0/0:13,0:19:11.32:0,11,56	0/0:8,0:14:11.36:0,11,56	0/1:20,5:24:6.86:182,0,7	1/1:24,0:24:17.65:145,18,0	./.
chr10	73556607	.	CT	C	426.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.930;DP=530;FS=14.743;HRun=9;HaplotypeScore=63.8821;InbreedingCoeff=0.9124;MQ=65.53;MQ0=1;MQRankSum=-2.467;QD=12.19;ReadPosRankSum=-0.115;VQSLOD=1.3568;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,28:33:57.01:521,57,0	0/0:4,0:4:12.04:0,12,138	0/0:17,1:14:11.71:0,12,333	0/0:19,0:15:32.01:0,32,317	0/0:23,0:23:51.11:0,51,574	0/0:22,0:22:63.18:0,63,718	0/0:15,0:15:33.10:0,33,381	0/0:30,0:30:75.21:0,75,849	0/0:20,0:21:50.97:0,51,558	0/0:26,2:28:14.23:0,14,651	0/0:17,0:17:45.13:0,45,519	0/0:10,0:10:24.07:0,24,276	0/0:15,0:15:39.10:0,39,440	0/0:20,0:20:57.17:0,57,658	0/0:21,0:21:60.17:0,60,684	0/0:15,0:15:45.13:0,45,519	0/0:29,0:29:47.82:0,48,804	0/0:20,0:20:48.11:0,48,533	0/0:24,2:25:35.67:0,36,642	0/0:15,0:15:39.12:0,39,450	0/0:10,0:10:27.07:0,27,302	0/0:11,0:11:27.08:0,27,312	0/0:16,0:16:39.12:0,39,450	0/0:15,0:15:45.13:0,45,519	0/0:21,0:21:36.05:0,36,390	0/0:23,0:23:69.20:0,69,789	0/0:22,0:22:57.16:0,57,648	0/0:9,0:8:18.05:0,18,208
chr10	73558186	.	A	AT	3077.77	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.937;DP=562;FS=4.324;HRun=0;HaplotypeScore=81.9921;InbreedingCoeff=0.9934;MQ=57.96;MQ0=40;MQRankSum=-2.465;QD=24.23;ReadPosRankSum=2.902;VQSLOD=5.0626;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:42:99:0,111,1546	0/0:7,0:7:21.06:0,21,271	0/0:22,0:16:44.36:0,44,593	0/0:11,0:7:18.06:0,18,251	0/0:22,0:22:48.16:0,48,668	0/0:26,0:23:66.22:0,66,923	0/0:18,0:16:48.16:0,48,671	0/0:41,0:34:99:0,99,1373	0/0:18,0:17:45.15:0,45,615	1/1:0,9:9:27.06:292,27,0	1/1:1,18:19:42.10:469,42,0	1/1:2,12:12:30.04:290,30,0	1/1:0,14:14:39.08:406,39,0	0/0:8,0:8:21.07:0,21,294	0/0:21,0:21:57.19:0,57,785	0/0:24,0:22:66.22:0,66,913	0/0:32,0:29:69.23:0,69,958	1/1:4,14:15:42.10:455,42,0	0/0:18,0:18:51.17:0,51,710	0/0:18,0:18:51.11:0,51,665	0/0:51,0:43:99:0,117,1617	1/1:1,10:11:30.03:290,30,0	1/1:0,6:6:18.05:198,18,0	1/1:2,19:19:48.09:492,48,0	1/1:4,11:14:36.09:402,36,0	0/0:21,0:18:51.17:0,51,713	0/0:23,0:23:63.21:0,63,878	0/0:8,0:5:15.05:0,15,205
chr10	73558187	.	G	GT	3078.57	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.879;DP=569;FS=5.068;HRun=0;HaplotypeScore=85.0708;InbreedingCoeff=0.9928;MQ=57.45;MQ0=45;MQRankSum=-2.896;QD=23.15;ReadPosRankSum=2.834;VQSLOD=5.1801;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:42:99:0,111,1545	0/0:6,0:6:18.06:0,18,251	0/0:22,0:16:45.11:0,45,569	0/0:11,0:7:18.06:0,18,252	0/0:22,0:22:48.12:0,48,634	0/0:26,0:23:66.22:0,66,923	0/0:19,0:16:48.16:0,48,670	0/0:41,0:34:99:0,102,1404	0/0:18,0:17:45.15:0,45,620	1/1:1,9:10:30.07:331,30,0	1/1:1,18:19:39.04:426,39,0	1/1:4,12:14:33.04:319,33,0	1/1:0,14:14:39.08:407,39,0	0/0:8,0:8:21.07:0,21,294	0/0:21,0:21:57.19:0,57,797	0/0:24,0:22:66.22:0,66,922	0/0:34,0:29:69.23:0,69,964	1/1:6,14:16:42.10:455,42,0	0/0:18,0:18:54.14:0,54,733	0/0:17,0:17:48.16:0,48,664	0/0:51,0:42:99:0,114,1576	1/1:2,10:11:27.04:265,27,0	1/1:0,6:6:18.05:198,18,0	1/1:2,19:19:48.09:493,48,0	1/1:4,11:14:36.09:400,36,0	0/0:21,0:18:54.14:0,54,733	0/0:23,0:23:66.18:0,66,900	0/0:8,0:5:15.05:0,15,210
chr10	73561767	.	T	TTTCGTC	13569.68	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-1.956;DP=587;FS=0.363;HRun=0;HaplotypeScore=118.5752;InbreedingCoeff=0.9987;MQ=70.39;MQ0=2;MQRankSum=-16.602;QD=79.35;ReadPosRankSum=-2.500;VQSLOD=5.3503;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,19:30:54.19:1856,54,0	0/0:13,0:13:36.12:0,36,866	0/0:9,0:8:21.07:0,21,499	0/0:16,0:15:32.89:0,33,671	0/0:25,0:25:72.25:0,72,1729	0/0:23,0:23:69.24:0,69,1637	0/0:21,0:21:63.22:0,63,1511	0/0:24,0:24:66.23:0,66,1547	0/0:20,0:20:60.21:0,60,1378	1/1:3,10:16:45.14:1503,45,0	1/1:4,9:13:33.11:1073,33,0	1/1:5,10:17:42.14:1500,42,0	1/1:5,11:18:42.14:1440,42,0	0/0:31,0:31:90.31:0,90,2163	0/0:26,0:26:78.27:0,78,1855	0/0:10,0:10:27.09:0,27,608	0/0:34,0:34:90.28:0,90,2083	1/1:5,11:16:39.13:1393,39,0	0/0:22,0:22:63.20:0,63,1467	0/0:14,0:14:39.11:0,39,845	0/0:64,0:63:99:0,184,4295	1/1:3,14:17:51.18:1744,51,0	1/1:3,9:14:30.10:928,30,0	1/1:1,12:15:24.08:851,24,0	1/1:3,9:15:36.12:1282,36,0	0/0:12,0:12:36.12:0,36,853	0/0:28,0:28:84.27:0,84,1968	0/0:24,0:24:72.25:0,72,1727
chr10	73562041	.	T	TC	7488.39	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-5.591;DP=549;FS=1.538;HRun=1;HaplotypeScore=58.2850;InbreedingCoeff=0.9985;MQ=84.06;MQ0=0;MQRankSum=-4.634;QD=40.48;ReadPosRankSum=1.667;VQSLOD=5.4836;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:72.24:1077,72,0	0/0:13,0:13:36.12:0,36,467	0/0:14,0:15:41.98:0,42,470	0/0:21,0:21:56.66:0,57,679	0/0:17,0:17:51.17:0,51,662	0/0:13,0:13:35.91:0,36,441	0/0:25,0:25:72.21:0,72,906	0/0:31,0:31:93.26:0,93,1158	0/0:17,0:17:51.15:0,51,647	1/1:0,21:21:63.20:924,63,0	1/1:1,9:10:27.02:377,27,0	1/1:1,24:25:72.11:1046,72,0	1/1:1,13:14:42.03:594,42,0	0/0:21,0:21:63.12:0,63,769	0/0:31,0:31:90.29:0,90,1167	0/0:20,0:20:60.20:0,60,778	0/0:29,0:29:87.25:0,87,1099	1/1:1,25:26:75.22:1100,75,0	0/0:25,0:25:72.20:0,72,891	0/0:11,0:11:33.10:0,33,416	0/0:18,0:18:54.14:0,54,658	1/1:1,8:9:18.06:269,18,0	1/1:1,15:16:42.02:628,42,0	1/1:2,25:27:69.23:1032,69,0	1/1:1,9:11:30.10:441,30,0	0/0:18,0:18:48.16:0,48,623	0/0:25,0:25:75.15:0,75,922	0/0:14,0:14:42.12:0,42,530
chr10	73562106	.	T	TTTCC	8217.64	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=1.863;DP=514;FS=11.092;HRun=0;HaplotypeScore=103.6561;InbreedingCoeff=0.9368;MQ=60.94;MQ0=2;MQRankSum=-4.170;QD=43.02;ReadPosRankSum=1.343;VQSLOD=5.1576;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:48.14:0,48,763	0/0:2,0:2:6.02:0,6,101	0/0:31,0:19:20.97:0,21,269	0/1:33,0:22:0.56:1,0,202	0/0:15,0:15:30.10:0,30,484	0/0:18,0:18:51.16:0,51,822	0/0:35,0:35:82.14:0,82,1263	0/0:23,0:23:42.12:0,42,645	0/0:15,0:15:36.12:0,36,575	1/1:10,7:17:42.12:879,42,0	1/1:6,15:22:60.21:1398,60,0	1/1:10,9:19:36.07:753,36,0	1/1:4,8:12:33.10:711,33,0	0/0:12,0:12:24.06:0,24,372	0/0:14,0:14:21.07:0,21,352	0/0:14,0:14:39.13:0,39,656	0/0:21,0:21:51.15:0,51,831	1/1:7,11:18:42.14:961,42,0	0/0:13,0:13:15.05:0,15,250	0/0:15,0:15:44.58:0,45,650	0/0:12,0:12:24.08:0,24,405	1/1:7,8:15:36.11:810,36,0	1/1:7,8:15:33.11:705,33,0	1/1:11,11:22:51.01:1082,51,0	1/1:8,10:18:42.09:919,42,0	0/0:18,0:18:42.14:0,42,686	0/0:19,0:19:48.15:0,48,783	0/0:24,0:24:66.22:0,66,1071
chr10	73562177	.	CCTTA	C	2917.89	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.201;DP=400;FS=12.347;HRun=0;HaplotypeScore=109.6783;InbreedingCoeff=0.9337;MQ=71.02;MQ0=3;MQRankSum=-10.104;QD=36.47;ReadPosRankSum=-0.813;VQSLOD=3.0078;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:7.74:332,8,0	0/0:1,0:1:3.01:0,3,81	0/0:25,0:18:44.08:0,44,808	0/0:17,0:15:24.79:0,25,583	0/0:19,0:19:57.17:0,57,1393	0/0:16,0:16:42.06:0,42,943	0/0:14,0:14:39.07:0,39,925	0/0:24,0:23:69.23:0,69,1683	0/0:12,0:12:36.12:0,36,934	1/1:4,15:19:54.03:911,54,0	1/1:5,17:22:57.11:920,57,0	0/0:15,0:16:47.90:0,48,624	0/0:10,0:10:29.03:0,29,357	0/0:9,0:9:27.09:0,27,647	0/0:8,0:8:21.07:0,21,567	0/0:12,0:12:33.11:0,33,830	0/0:22,0:22:60.20:0,60,1424	1/1:3,5:7:17.63:262,18,0	0/0:15,0:15:42.10:0,42,1012	0/0:13,0:13:36.12:0,36,950	0/0:5,0:5:15.05:0,15,378	0/0:14,0:14:38.42:0,38,510	0/0:12,0:12:23.83:0,24,325	0/0:8,0:8:21.02:0,21,289	1/1:2,12:14:36.12:662,36,0	0/0:21,0:21:60.20:0,60,1513	0/0:18,0:18:54.17:0,54,1398	0/0:9,0:9:27.09:0,27,712
chr10	73562181	.	A	ACTTC	4079.95	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=5.068;DP=395;FS=1.030;HRun=0;HaplotypeScore=108.8868;InbreedingCoeff=0.6835;MQ=73.63;MQ0=2;MQRankSum=-7.650;QD=39.23;ReadPosRankSum=0.996;VQSLOD=3.9978;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:45.07:45,0,52	0/0:1,0:1:3.01:0,3,57	0/0:25,0:20:30.98:0,31,633	0/0:15,0:14:21.80:0,22,388	0/0:19,0:19:51.17:0,51,956	0/0:14,0:14:39.07:0,39,654	0/0:13,0:13:33.99:0,34,595	0/0:24,0:24:69.22:0,69,1224	0/0:12,0:12:36.08:0,36,614	0/0:19,0:19:20.65:0,21,250	0/1:19,0:19:68.63:69,0,113	1/1:3,12:15:45.03:1085,45,0	1/1:3,7:10:27.09:688,27,0	0/0:10,0:10:27.09:0,27,493	0/0:8,0:8:21.07:0,21,398	0/0:11,0:11:33.10:0,33,596	0/0:20,0:20:60.08:0,60,999	0/1:9,0:8:5.60:6,0,53	0/0:18,0:18:45.14:0,45,790	0/0:15,0:15:45.10:0,45,690	0/0:5,0:5:15.01:0,15,247	1/1:3,12:15:39.13:1018,39,0	1/1:4,7:11:24.04:585,24,0	1/1:2,7:9:24.04:585,24,0	0/0:14,0:14:32.04:0,32,245	0/0:20,0:20:57.18:0,57,1056	0/0:18,0:18:51.17:0,51,977	0/0:9,0:9:27.08:0,27,479
chr10	73563087	.	GT	G	3908.18	PASS	AB=0.875;AC=21;AF=0.375;AN=56;BaseQRankSum=8.906;DP=685;FS=2.908;HRun=11;HaplotypeScore=74.7654;InbreedingCoeff=0.8988;MQ=74.08;MQ0=0;MQRankSum=0.295;QD=14.69;ReadPosRankSum=6.405;VQSLOD=4.1319;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,41:45:80.90:665,81,0	0/0:4,0:4:9.02:0,9,90	0/0:35,0:24:32.28:0,32,248	0/1:17,3:16:45.78:46,0,78	0/0:25,1:26:44.51:0,45,658	0/0:18,2:21:7.72:0,8,476	0/0:18,1:20:32.36:0,32,515	0/0:26,0:27:62.95:0,63,626	0/0:21,1:22:29.47:0,29,505	1/1:4,15:19:41.63:323,42,0	1/1:5,24:29:62.76:507,63,0	1/1:2,22:24:44.93:369,45,0	1/1:2,20:22:41.95:345,42,0	0/0:21,0:21:57.12:0,57,592	0/0:26,2:29:52.78:0,53,721	0/0:19,0:19:48.10:0,48,497	0/0:27,1:28:53.41:0,53,725	1/1:4,18:22:35.94:295,36,0	0/0:36,2:38:34.90:0,35,761	0/0:23,2:25:29.48:0,29,511	0/0:24,0:25:65.93:0,66,658	1/1:3,17:21:40.84:312,41,0	1/1:3,15:19:38.79:319,39,0	1/1:4,22:26:54.39:444,54,0	1/1:4,14:18:35.86:283,36,0	0/0:23,2:25:10.86:0,11,520	0/0:31,0:33:84.01:0,84,854	0/0:20,0:20:48.05:0,48,483
chr10	73563903	.	TA	T	2152.98	PASS	AB=0.800;AC=19;AF=0.352;AN=54;BaseQRankSum=8.851;DP=238;FS=9.073;HRun=1;HaplotypeScore=26.1348;InbreedingCoeff=0.7475;MQ=85.54;MQ0=3;MQRankSum=-0.269;QD=31.20;ReadPosRankSum=1.998;VQSLOD=2.2275;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:25.19:592,25,0	0/0:4,0:4:12.04:0,12,183	0/0:11,0:9:11.96:0,12,133	0/0:19,0:10:7.93:0,8,43	0/0:11,0:11:27.07:0,27,362	0/0:10,0:10:26.80:0,27,385	0/0:3,0:3:9:0,9,114	0/0:29,0:29:84.25:0,84,1160	0/0:1,0:1:3:0,3,25	1/1:0,8:8:24.08:327,24,0	1/1:0,5:5:15.01:188,15,0	1/1:0,4:4:9.03:126,9,0	1/1:0,1:1:3.01:37,3,0	0/0:2,0:2:6.02:0,6,78	0/0:8,0:8:24.08:0,24,339	0/0:9,0:9:27.09:0,27,399	0/0:24,0:24:72.21:0,72,1036	1/1:1,17:16:48.13:650,48,0	0/0:11,0:11:33.10:0,33,486	0/0:4,0:4:12.04:0,12,169	0/0:2,0:2:6.02:0,6,92	./.	1/1:0,5:5:9.03:112,9,0	1/1:0,1:1:3.01:37,3,0	1/1:0,7:7:18.06:247,18,0	0/1:3,1:4:29.91:30,0,107	0/0:6,0:6:18.02:0,18,217	0/0:15,0:14:45.14:0,45,632
chr10	73565117	.	CGTGTGTGT	C	580.84	PASS	AB=1.000;AC=12;AF=0.240;AN=50;BaseQRankSum=0.783;DP=486;FS=6.610;HRun=0;HaplotypeScore=117.8691;InbreedingCoeff=0.4173;MQ=58.35;MQ0=39;MQRankSum=0.618;QD=4.33;ReadPosRankSum=1.525;VQSLOD=1.8830;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,1:28:2.28:50,2,0	0/0:12,0:11:15.04:0,15,397	./.	./.	0/0:11,0:11:3.01:0,3,89	0/0:12,0:12:3.48:0,3,46	0/0:35,0:29:20.72:0,21,488	0/0:15,0:12:2.96:0,3,19	0/0:14,0:13:12.04:0,12,353	1/1:20,0:20:9.03:211,9,0	1/1:10,3:10:3.01:66,3,0	0/0:23,0:22:5.79:0,6,16	0/0:13,0:13:4.24:0,4,29	0/0:13,0:11:15.05:0,15,371	0/0:10,0:10:3.01:0,3,88	0/0:10,0:8:6.01:0,6,200	0/0:38,0:34:43.01:0,43,894	1/1:14,1:11:6.02:113,6,0	0/0:17,0:17:9.03:0,9,233	0/0:9,0:9:3.01:0,3,96	0/0:36,0:29:15.05:0,15,348	./.	0/1:15,0:14:11:11,0,23	0/1:26,0:23:23.60:24,0,107	1/1:15,0:13:12.03:249,12,0	0/0:28,0:27:32.91:0,33,629	0/0:11,0:10:17.63:0,18,218	0/0:6,0:5:6.02:0,6,210
chr10	73565167	.	TGAGAGAGAGAGA	T	508.65	PASS	AB=1.000;AC=3;AF=0.063;AN=48;BaseQRankSum=4.088;DP=501;FS=12.458;HRun=0;HaplotypeScore=134.5944;InbreedingCoeff=0.4351;MQ=39.95;MQ0=76;MQRankSum=-2.653;QD=11.56;ReadPosRankSum=0.691;VQSLOD=1.7035;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,1:38:0:0,0,1	0/0:7,0:6:6.02:0,6,210	./.	./.	0/0:15,0:13:12.04:0,12,465	0/0:16,0:15:12.03:0,12,313	0/0:40,0:30:14.58:0,15,590	0/0:14,0:13:16.57:0,17,284	0/0:14,0:12:12.04:0,12,528	1/1:15,7:19:21.05:597,21,0	./.	0/0:16,0:16:11.22:0,11,345	0/0:9,0:7:0.94:0,1,1	0/0:15,0:15:14.79:0,15,536	0/0:10,0:9:11.07:0,11,349	0/0:13,0:10:12.03:0,12,398	0/0:42,0:34:39.12:0,39,1218	0/0:23,0:14:9.46:0,9,729	0/0:14,0:12:11.97:0,12,489	./.	0/0:43,0:32:36.59:0,37,1659	0/0:17,0:17:6.02:0,6,285	0/0:9,0:9:4.57:0,5,76	0/0:43,0:39:45.41:0,45,1783	0/0:16,6:15:0:0,0,1	0/1:21,0:16:6.85:7,0,963	0/0:12,0:9:15.05:0,15,470	0/0:4,0:3:6.02:0,6,150
chr10	73565678	.	T	TG	192.90	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=1.735;DP=585;FS=1.154;HRun=4;HaplotypeScore=79.8613;InbreedingCoeff=0.6273;MQ=75.46;MQ0=0;MQRankSum=-1.282;QD=6.22;ReadPosRankSum=-1.780;VQSLOD=-0.4841;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:20.87:0,21,220	0/0:7,0:7:18.05:0,18,204	0/0:26,0:26:63.12:0,63,684	0/0:16,0:15:2.37:0,2,241	0/0:29,0:29:87.25:0,87,986	0/0:30,0:30:84.22:0,84,942	0/0:13,0:13:36.10:0,36,408	0/0:29,0:29:81.18:0,81,879	0/0:17,0:17:51.11:0,51,558	0/1:19,0:19:1.79:2,0,29	0/0:26,0:26:25.85:0,26,70	1/1:5,7:12:24.06:286,24,0	0/0:15,0:15:11.88:0,12,159	0/0:21,0:21:63.13:0,63,684	0/0:28,0:28:81.21:0,81,908	0/0:24,0:24:66.19:0,66,748	0/0:22,0:22:63.18:0,63,714	0/0:18,0:18:20.55:0,21,56	0/0:23,0:23:57.16:0,57,644	0/0:27,0:27:75.17:0,75,829	0/0:19,0:19:45.13:0,45,510	0/0:19,0:19:46.14:0,46,251	0/0:17,0:17:39.01:0,39,200	0/0:17,0:17:31.58:0,32,172	0/0:15,0:15:18.05:0,18,55	0/0:23,0:23:58.37:0,58,636	0/0:30,0:30:87.25:0,87,986	0/0:20,0:20:60.17:0,60,680
chr10	73565682	.	GA	G	2946.41	PASS	AB=0.980;AC=15;AF=0.268;AN=56;BaseQRankSum=7.095;DP=582;FS=2.475;HRun=1;HaplotypeScore=68.4015;InbreedingCoeff=0.5154;MQ=76.20;MQ0=0;MQRankSum=-1.009;QD=16.28;ReadPosRankSum=-0.672;VQSLOD=3.5184;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,1:20:45.53:46,0,71	0/0:7,0:7:18.06:0,18,257	0/0:26,0:26:75.18:0,75,960	0/0:15,0:14:1.95:0,2,293	0/0:30,0:30:90.26:0,90,1226	0/0:29,0:29:87.23:0,87,1171	0/0:14,0:14:42.08:0,42,527	0/0:30,0:30:90.27:0,90,1212	0/0:17,0:17:51.14:0,51,687	1/1:0,20:20:57.13:723,57,0	1/1:1,25:26:60.20:837,60,0	1/1:12,0:12:26.15:167,26,0	0/1:15,0:15:41.56:42,0,43	0/0:21,0:21:63.18:0,63,865	0/0:27,0:27:81.23:0,81,1098	0/0:25,0:25:69.36:0,69,931	0/0:22,0:22:66.19:0,66,904	1/1:0,18:18:48.16:670,48,0	0/0:19,0:19:56.53:0,57,733	0/0:27,0:27:78.18:0,78,1036	0/0:19,0:19:57.15:0,57,755	0/1:20,0:20:34.07:34,0,62	0/1:17,1:18:46.80:57,0,47	0/1:16,0:16:25.86:26,0,44	1/1:0,16:16:39.13:533,39,0	0/0:21,1:22:21.22:0,21,763	0/0:31,0:31:93.23:0,93,1261	0/0:20,0:20:60.17:0,60,819
chr10	73566108	.	G	GA	999.05	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=3.793;DP=461;FS=1.321;HRun=8;HaplotypeScore=77.2322;InbreedingCoeff=0.7875;MQ=52.30;MQ0=17;MQRankSum=-4.445;QD=13.32;ReadPosRankSum=-2.108;VQSLOD=3.1548;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:86.33:0,86,787	0/0:6,0:6:14.99:0,15,133	./.	0/0:9,0:1:2.92:0,3,17	0/0:31,0:31:72.03:0,72,659	0/0:17,0:16:47.99:0,48,429	0/0:6,0:7:12.01:0,12,110	0/0:17,0:15:36:0,36,329	0/0:10,0:10:26.98:0,27,237	0/0:20,0:17:14.93:0,15,136	0/0:22,0:19:18.93:0,19,300	1/1:9,7:16:27.06:297,27,0	1/1:1,7:8:18.05:207,18,0	0/0:16,0:16:30:0,30,275	0/0:15,0:15:36.01:0,36,329	0/0:8,0:8:17.97:0,18,156	0/0:32,0:31:73.83:0,74,658	0/0:29,1:29:40.45:0,40,624	0/0:15,0:13:33.01:0,33,302	0/0:19,0:18:51.02:0,51,466	0/0:6,0:5:6:0,6,55	1/1:1,3:3:6.02:69,6,0	1/1:3,10:11:30.09:346,30,0	1/1:7,3:8:18.05:207,18,0	0/1:24,0:23:41.83:42,0,236	0/0:29,0:26:54:0,54,491	0/0:17,0:17:42.01:0,42,384	0/0:16,0:15:36.02:0,36,329
chr10	73566129	.	GA	G	1392.19	PASS	AB=0.967;AC=19;AF=0.352;AN=54;BaseQRankSum=11.620;DP=492;FS=7.843;HRun=10;HaplotypeScore=62.7449;InbreedingCoeff=0.8656;MQ=57.62;MQ0=12;MQRankSum=-3.042;QD=7.82;ReadPosRankSum=2.891;VQSLOD=1.4291;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:32:83.02:456,83,0	0/0:3,0:3:6.02:0,6,66	0/1:27,1:6:8.59:9,0,52	0/0:33,0:12:26.33:0,26,150	0/0:27,0:27:62.26:0,62,752	0/0:16,0:16:36.10:0,36,398	0/0:7,0:7:21.06:0,21,232	0/0:35,0:34:90.22:0,90,979	0/0:11,0:11:30.05:0,30,314	1/1:12,2:12:18.72:125,19,0	1/1:15,3:16:20.58:135,21,0	1/1:8,1:9:14.39:80,14,0	1/1:9,0:9:22.83:125,23,0	0/0:14,0:14:33.09:0,33,364	0/0:18,0:18:39.11:0,39,431	0/0:9,0:9:24.06:0,24,260	0/0:32,1:32:52.14:0,52,792	1/1:29,0:28:69.26:393,69,0	0/0:19,1:18:18.45:0,18,382	0/0:22,0:22:25.19:0,25,501	0/0:4,0:3:1.55:0,2,4	./.	1/1:8,1:7:12.99:70,13,0	1/1:6,0:4:8.45:44,8,0	1/1:20,2:22:29.99:161,30,0	0/0:29,1:27:45.38:0,45,704	0/0:14,0:14:36.10:0,36,398	0/0:16,0:16:42.11:0,42,464
chr10	73566137	.	A	AAG	709.65	PASS	AB=0.920;AC=16;AF=0.286;AN=56;BaseQRankSum=10.338;DP=487;FS=17.970;HRun=0;HaplotypeScore=74.7023;InbreedingCoeff=0.5782;MQ=61.57;MQ0=8;MQRankSum=2.484;QD=4.83;ReadPosRankSum=2.106;VQSLOD=0.8983;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:7.78:85,0,8	0/0:2,0:2:6.02:0,6,85	0/0:32,0:9:19.75:0,20,149	0/0:33,0:13:16.58:0,17,197	0/0:27,0:27:81.14:0,81,1059	0/0:14,0:14:42.12:0,42,564	0/0:8,0:8:21.07:0,21,299	0/0:37,0:37:99:0,102,1351	0/0:12,0:12:36.09:0,36,448	0/1:13,2:14:9:84,0,9	0/1:13,3:14:40.78:107,0,41	1/1:9,0:9:17.87:134,18,0	1/1:11,0:11:23.81:175,24,0	0/0:15,0:15:36.11:0,36,491	0/0:17,0:17:48.09:0,48,616	0/0:10,0:10:27.07:0,27,350	0/0:33,0:33:87.18:0,87,1120	1/1:27,0:26:35.75:94,36,0	0/0:21,0:19:53.03:0,53,601	0/0:18,0:18:54.13:0,54,718	0/0:1,0:1:3.01:0,3,32	1/1:1,0:1:2.04:6,2,0	1/1:7,0:6:13.52:75,14,0	1/1:6,0:4:8.90:63,9,0	0/1:20,1:21:44.73:69,0,45	0/0:29,0:28:81.19:0,81,1054	0/0:14,0:14:42.12:0,42,564	0/0:16,0:16:48.14:0,48,628
chr10	73566138	.	A	AG	1143.33	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=10.471;DP=488;FS=5.557;HRun=0;HaplotypeScore=64.5559;InbreedingCoeff=0.6400;MQ=61.66;MQ0=8;MQRankSum=0.763;QD=7.78;ReadPosRankSum=2.523;VQSLOD=3.0874;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:31.40:157,31,0	0/0:2,0:2:6.02:0,6,83	0/0:33,0:9:2.86:0,3,94	0/0:33,0:13:12.84:0,13,163	0/0:27,0:27:81.19:0,81,1056	0/0:14,0:14:42.12:0,42,552	0/0:8,0:8:24.07:0,24,317	0/0:38,0:38:99:0,105,1348	0/0:12,0:12:36.09:0,36,440	0/1:15,0:14:22.50:34,0,23	0/1:16,0:14:15.48:86,0,15	1/1:3,6:9:16.59:206,17,0	1/1:1,10:11:24.07:324,24,0	0/0:14,0:14:36.10:0,36,471	0/0:18,0:18:48.10:0,48,608	0/0:10,0:10:26.11:0,26,326	0/0:33,0:33:87.10:0,87,1096	1/1:27,0:26:50.25:174,50,0	0/0:21,0:19:43.93:0,44,559	0/0:18,0:18:54.04:0,54,706	0/0:1,0:1:3.01:0,3,31	1/1:1,0:1:2.94:18,3,0	1/1:3,4:6:14.26:160,14,0	1/1:2,4:4:9.03:122,9,0	0/1:21,0:21:11.11:52,0,11	0/0:29,0:28:84.10:0,84,1058	0/0:14,0:14:42.12:0,42,551	0/0:16,0:16:48.14:0,48,632
chr10	73567629	.	C	CT	2006.04	PASS	AB=0.898;AC=22;AF=0.393;AN=56;BaseQRankSum=3.991;DP=601;FS=3.562;HRun=12;HaplotypeScore=78.2917;InbreedingCoeff=0.6846;MQ=63.90;MQ0=10;MQRankSum=-0.457;QD=7.75;ReadPosRankSum=1.250;VQSLOD=2.7816;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:37:29.65:147,30,0	0/0:11,0:11:17.85:0,18,131	0/0:17,0:7:5.01:0,5,78	0/1:23,0:12:20.09:20,0,61	0/0:31,2:34:17.95:0,18,450	0/0:18,0:19:43.78:0,44,312	0/0:15,0:15:41.73:0,42,304	0/0:37,0:38:58.59:0,59,407	0/0:22,0:22:38.66:0,39,284	1/1:3,20:25:37.25:536,37,0	1/1:3,10:14:23.15:245,23,0	1/1:3,0:17:26.12:131,26,0	1/1:14,0:21:28.02:142,28,0	0/0:22,1:23:30.53:0,31,389	0/0:19,0:19:36.60:0,37,265	0/0:15,0:15:38.76:0,39,284	0/0:32,1:32:46.59:0,47,498	1/1:1,24:27:59.77:554,60,0	0/0:33,0:30:18.56:0,19,289	0/0:26,1:28:16.99:0,17,352	0/1:8,1:8:11.29:11,0,92	1/1:4,0:11:14.67:72,15,0	1/1:5,0:17:17.52:87,18,0	1/1:6,1:21:24.09:131,24,0	0/1:10,2:13:18.76:131,0,19	0/1:18,3:22:11.63:12,0,238	0/0:23,0:23:27.74:0,28,346	0/0:9,0:10:22.90:0,23,159
chr10	73567947	.	A	AAAAC	5169.46	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=-9.421;DP=492;FS=1.703;HRun=0;HaplotypeScore=74.0768;InbreedingCoeff=0.9645;MQ=59.40;MQ0=6;MQRankSum=1.885;QD=36.40;ReadPosRankSum=0.769;VQSLOD=4.4144;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,24:44:60.16:1392,60,0	0/0:12,0:12:30.10:0,30,480	./.	0/0:11,0:6:15.02:0,15,194	0/0:27,0:27:42.14:0,42,675	0/0:12,0:11:24.08:0,24,386	0/0:15,0:15:9.03:0,9,145	0/0:18,0:15:9.03:0,9,142	0/0:18,0:18:42.14:0,42,675	0/0:22,0:22:39.13:0,39,626	0/0:13,0:13:18.06:0,18,289	1/1:5,10:15:24.08:577,24,0	1/1:3,8:11:24.08:577,24,0	0/0:18,0:19:39.13:0,39,605	0/0:12,0:12:30.10:0,30,479	0/0:11,0:11:21.06:0,21,314	0/0:36,0:36:81.26:0,81,1270	1/1:7,16:24:36.12:866,36,0	0/0:19,0:17:21.07:0,21,334	0/0:16,0:16:39.12:0,39,603	0/0:9,0:9:21.07:0,21,337	1/1:3,5:8:12.04:288,12,0	1/1:9,10:20:30.10:675,30,0	1/1:6,12:20:33.11:794,33,0	0/0:17,0:17:45.15:0,45,723	0/0:17,0:17:24.08:0,24,386	0/0:26,0:25:72.22:0,72,1110	0/0:11,0:11:27.09:0,27,434
chr10	73569376	.	CAA	C	395.86	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.439;DP=457;FS=0.849;HRun=13;HaplotypeScore=64.5757;InbreedingCoeff=0.8415;MQ=61.39;MQ0=26;MQRankSum=-0.302;QD=10.70;ReadPosRankSum=0.511;VQSLOD=2.0299;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,2:35:27.98:0,28,968	0/0:8,0:8:20.55:0,21,254	0/0:27,0:10:22.97:0,23,192	0/0:26,0:14:15.85:0,16,141	0/0:15,0:19:47.63:0,48,616	0/0:14,0:16:41.59:0,42,551	0/0:20,0:18:35.05:0,35,426	0/0:29,0:26:50.93:0,51,642	0/0:8,0:8:14.54:0,15,180	1/1:6,7:12:13.23:161,13,0	1/1:3,6:9:14.97:145,15,0	0/0:9,0:9:21.03:0,21,278	0/0:9,0:8:12.04:0,12,171	0/0:16,0:17:38.16:0,38,522	0/0:10,0:10:19.62:0,20,264	0/0:12,0:12:36.12:0,36,520	0/0:30,0:33:76.65:0,77,1000	0/0:18,0:17:36.12:0,36,516	0/0:12,1:13:0.48:0,0,327	0/0:14,0:13:29.99:0,30,344	0/0:9,1:8:11.94:0,12,174	0/0:8,0:9:14.54:0,15,182	0/0:21,0:21:57.06:0,57,764	0/0:16,0:14:30.10:0,30,434	1/1:2,12:15:18:224,18,0	0/0:11,0:11:27.04:0,27,353	0/0:11,0:11:18.06:0,18,259	0/0:4,0:3:9.03:0,9,128
chr10	73570123	.	G	GA	4729.33	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-10.615;DP=677;FS=0.000;HRun=5;HaplotypeScore=67.5189;InbreedingCoeff=0.9901;MQ=72.71;MQ0=0;MQRankSum=1.294;QD=29.37;ReadPosRankSum=3.573;VQSLOD=5.2099;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,39:41:99:1287,100,0	0/0:6,0:6:12.01:0,12,120	0/0:24,0:21:32.90:0,33,397	0/0:16,0:16:29.50:0,30,269	0/0:25,0:25:69.13:0,69,722	0/0:23,0:23:63.12:0,63,658	0/0:28,0:28:78.15:0,78,812	0/0:22,0:22:60.08:0,60,604	0/0:31,0:31:90.17:0,90,934	0/0:33,0:34:86.14:0,86,862	0/0:14,0:14:27.01:0,27,276	1/1:3,21:24:51.03:662,51,0	1/1:2,21:23:54.18:701,54,0	0/0:23,0:23:63.10:0,63,643	0/0:37,0:37:99:0,111,1176	0/0:18,0:18:54.12:0,54,571	0/0:39,0:39:99:0,105,1112	0/0:19,0:19:57.14:0,57,612	0/0:20,0:20:57.10:0,57,584	0/0:15,0:15:45.11:0,45,481	0/0:31,0:31:93.13:0,93,946	1/1:5,19:24:57.14:714,57,0	1/1:3,18:21:43.02:546,43,0	1/1:3,25:28:63.20:818,63,0	0/0:22,0:22:63.15:0,63,667	0/0:41,0:41:99:0,114,1197	0/0:23,0:23:60.14:0,60,636	0/0:5,0:5:15.03:0,15,154
chr10	73570357	.	TTG	T	256.09	PASS	AB=0.976;AC=13;AF=0.260;AN=50;BaseQRankSum=0.722;DP=578;FS=11.453;HRun=0;HaplotypeScore=89.6841;InbreedingCoeff=0.3358;MQ=71.47;MQ0=10;MQRankSum=0.080;QD=1.38;ReadPosRankSum=-0.241;VQSLOD=0.7390;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:27:8.99:0,9,101	0/0:5,0:4:3.01:0,3,44	./.	./.	0/1:25,1:26:14.09:14,0,181	0/0:21,0:21:15.05:0,15,218	0/0:27,0:27:18.05:0,18,237	0/0:22,0:21:3:0,3,25	0/0:15,0:15:8.81:0,9,129	1/1:21,0:21:12.01:111,12,0	1/1:13,0:13:5.84:58,6,0	0/0:20,0:21:14.99:0,15,143	0/0:20,0:20:21:0,21,202	0/1:13,0:13:5.24:5,0,133	0/0:21,0:20:15.99:0,16,259	0/1:21,1:22:14.10:14,0,202	0/1:24,1:25:8.06:8,0,278	1/1:12,0:16:11.36:56,11,0	0/0:19,0:19:6.02:0,6,79	0/0:16,0:17:8.79:0,9,131	0/1:34,0:32:14.04:14,0,181	0/0:22,0:21:39.03:0,39,413	0/0:15,0:15:11.98:0,12,103	0/0:35,0:36:30.02:0,30,298	1/1:13,2:15:12.03:129,12,0	0/0:19,0:18:3.01:0,3,30	0/0:15,0:15:15.05:0,15,218	./.
chr10	73570399	.	G	GTA	1262.52	PASS	AB=0.841;AC=8;AF=0.143;AN=56;BaseQRankSum=-1.380;DP=479;FS=12.320;HRun=0;HaplotypeScore=79.0095;InbreedingCoeff=0.3690;MQ=60.24;MQ0=11;MQRankSum=0.396;QD=10.88;ReadPosRankSum=1.944;VQSLOD=2.1162;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:22:31.69:114,0,32	0/0:6,0:5:14.97:0,15,140	0/0:22,0:14:39.03:0,39,390	0/0:20,0:15:44.99:0,45,442	0/0:20,0:20:50.87:0,51,481	0/0:17,0:17:41.96:0,42,421	0/0:18,0:18:45.87:0,46,467	0/0:25,0:23:65.85:0,66,548	0/0:12,0:11:27.06:0,27,265	0/0:21,0:21:58.39:0,58,489	0/0:12,0:12:20.97:0,21,171	1/1:3,11:14:4.08:188,4,0	0/1:12,1:14:47.31:219,0,47	0/0:15,0:15:24.04:0,24,292	0/0:15,0:14:33.05:0,33,416	0/0:20,0:20:49.91:0,50,468	0/0:31,0:29:68.58:0,69,660	0/0:16,0:16:28.73:0,29,267	0/0:10,0:9:26.75:0,27,245	0/0:11,0:11:23.93:0,24,250	0/0:24,0:22:44.60:0,45,447	0/1:10,17:26:51.93:324,0,52	0/1:12,2:13:10.03:202,0,10	1/1:20,3:23:27.45:357,27,0	0/0:15,0:15:41.96:0,42,351	0/0:11,0:10:23.84:0,24,193	0/0:17,0:17:50.74:0,51,468	0/0:5,0:5:14.96:0,15,120
chr10	73571483	.	ACC	A	1046.80	PASS	AB=0.808;AC=18;AF=0.321;AN=56;BaseQRankSum=5.901;DP=370;FS=6.765;HRun=13;HaplotypeScore=49.2766;InbreedingCoeff=0.6809;MQ=67.83;MQ0=7;MQRankSum=-2.679;QD=7.59;ReadPosRankSum=3.463;VQSLOD=-0.3057;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,11:20:21.08:242,21,0	0/0:8,0:7:6.01:0,6,67	0/0:28,0:12:11.28:0,11,152	0/0:18,0:9:7.35:0,7,109	0/0:7,0:7:6.01:0,6,68	0/0:14,0:18:20.54:0,21,247	0/0:13,0:12:24.03:0,24,282	0/0:7,0:7:0:0,0,0	0/0:10,0:12:19.95:0,20,271	1/1:3,1:6:3.43:30,3,0	0/0:4,0:9:7.15:0,7,31	1/1:5,9:14:14.97:138,15,0	1/1:4,5:9:12.69:118,13,0	0/0:9,0:9:8.96:0,9,96	0/0:11,0:11:9.01:0,9,110	0/0:9,0:11:12.03:0,12,149	0/0:28,0:28:44.91:0,45,565	1/1:9,17:25:23.96:232,24,0	0/1:10,1:10:12.34:12,0,129	0/0:11,0:11:8.99:0,9,106	0/0:13,0:16:28.22:0,28,287	1/1:3,6:9:14.75:128,15,0	1/1:8,6:16:11.72:99,12,0	1/1:0,12:12:24.03:232,24,0	0/1:8,0:14:4.92:5,0,18	0/0:5,0:5:4.26:0,4,46	0/0:8,0:9:21.06:0,21,271	0/0:8,0:8:11.98:0,12,114
chr10	73572708	.	GATTT	G	1765.58	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.128;DP=594;FS=2.092;HRun=0;HaplotypeScore=97.1139;InbreedingCoeff=0.9704;MQ=71.75;MQ0=0;MQRankSum=-3.441;QD=36.03;ReadPosRankSum=0.249;VQSLOD=3.4499;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,2943	0/0:11,0:11:33.08:0,33,797	0/0:12,0:12:25.33:0,25,407	0/0:7,0:7:7.95:0,8,235	0/0:26,0:26:69.24:0,69,1840	0/0:19,0:19:57.20:0,57,1473	0/0:19,0:19:57.20:0,57,1519	0/0:40,0:40:99:0,99,2576	0/0:17,0:17:48.15:0,48,1224	1/1:1,17:18:45.15:839,45,0	1/1:2,14:16:32.81:493,33,0	0/0:20,0:20:57.20:0,57,1442	0/0:22,0:22:66.21:0,66,1691	0/0:9,0:9:24.08:0,24,640	0/0:24,0:23:66.23:0,66,1745	0/0:22,0:22:63.22:0,63,1637	0/0:45,0:45:99:0,132,3356	0/0:17,0:17:51.17:0,51,1288	0/0:22,0:22:63.21:0,63,1548	0/0:24,0:24:63.18:0,63,1515	0/0:18,0:18:54.17:0,54,1368	0/0:9,0:9:18.06:0,18,468	0/0:20,0:20:57.18:0,57,1430	0/0:22,0:22:66.23:0,66,1724	1/1:1,14:15:33.03:576,33,0	0/0:29,1:30:34.34:0,34,2206	0/0:36,0:36:99:0,105,2662	0/0:15,0:15:45.15:0,45,1167
chr10	73573145	.	A	AT	2799.68	PASS	AB=0.829;AC=31;AF=0.574;AN=54;BaseQRankSum=-6.962;DP=324;FS=29.431;HRun=11;HaplotypeScore=55.0374;InbreedingCoeff=0.5511;MQ=67.50;MQ0=2;MQRankSum=5.386;QD=11.71;ReadPosRankSum=0.110;VQSLOD=0.9035;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:19:29.64:0,30,119	0/0:4,0:4:5.97:0,6,46	0/1:19,0:8:1.39:1,0,36	0/1:13,0:7:3.04:20,0,3	0/1:5,18:23:4.52:308,0,5	0/0:18,0:18:32.64:0,33,273	0/0:6,0:6:14.78:0,15,107	1/1:17,23:40:20.89:522,21,0	0/1:2,5:7:8.10:107,0,8	0/1:2,0:3:3.95:4,0,5	1/1:1,0:3:2.60:10,3,0	0/0:3,0:7:5.42:0,5,35	0/0:2,0:9:13.01:0,13,53	1/1:8,0:8:8.76:50,9,0	1/1:1,0:1:3:25,3,0	1/1:8,1:9:5.50:59,6,0	1/1:0,13:14:18.95:197,19,0	1/1:2,1:15:12.19:91,12,0	1/1:4,15:19:43.46:437,43,0	1/1:3,13:16:27.01:262,27,0	1/1:0,1:1:3.01:30,3,0	0/0:0,0:8:15.96:0,16,63	0/0:0,0:3:5.54:0,6,24	0/0:0,0:6:2.80:0,3,13	./.	1/1:2,13:15:30.95:306,31,0	1/1:3,12:15:27.94:276,28,0	1/1:5,12:17:27.02:274,27,0
chr10	73573768	.	TAC	T	287.21	PASS	AB=0.916;AC=15;AF=0.288;AN=52;BaseQRankSum=3.253;DP=557;FS=0.000;HRun=0;HaplotypeScore=82.3973;InbreedingCoeff=-0.0218;MQ=54.25;MQ0=19;MQRankSum=0.806;QD=1.06;ReadPosRankSum=1.936;VQSLOD=1.3288;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:35:5.35:5,0,220	0/0:3,0:7:5.92:0,6,34	./.	./.	0/0:16,0:16:3.42:0,3,53	0/0:10,0:17:8.99:0,9,78	0/0:34,0:33:9.99:0,10,74	0/0:21,0:18:5.94:0,6,41	0/0:12,0:11:3.01:0,3,44	1/1:18,0:19:9.08:44,9,0	0/1:8,0:9:0:0,0,0	0/0:9,0:9:9.02:0,9,114	0/0:6,2:8:8.47:0,8,53	0/0:6,0:6:5.05:0,5,51	0/1:17,0:18:6.55:7,0,262	0/0:22,1:22:17.37:0,17,270	0/1:18,4:20:96.12:96,0,232	1/1:20,6:25:8.81:77,9,0	0/0:9,0:8:9.02:0,9,110	0/0:23,0:23:3.27:0,3,188	0/1:50,0:48:23.57:24,0,294	0/1:10,4:15:17.05:26,0,17	0/1:10,1:11:23.39:23,0,40	0/0:28,0:26:28.79:0,29,395	0/1:15,0:15:0.20:0,0,9	0/1:15,0:15:21.32:39,0,21	0/1:23,1:24:59.35:59,0,239	0/1:5,2:7:4.02:27,0,4
chr10	73574232	.	CCACATT	C	4535.04	PASS	AB=0.880;AC=19;AF=0.339;AN=56;BaseQRankSum=11.864;DP=590;FS=8.257;HRun=0;HaplotypeScore=132.1690;InbreedingCoeff=0.8834;MQ=73.72;MQ0=0;MQRankSum=-10.470;QD=23.02;ReadPosRankSum=-0.495;VQSLOD=3.8724;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,13:28:15.05:316,15,0	0/0:13,0:13:36.12:0,36,1190	0/0:21,0:21:22.28:0,22,663	0/0:25,0:24:33.10:0,33,896	0/0:22,0:22:54.19:0,54,1773	0/0:26,0:26:60.21:0,60,1919	0/0:20,0:20:42.13:0,42,1216	0/0:36,0:36:45.15:0,45,1330	0/0:17,0:17:39.12:0,39,1212	1/1:3,14:17:42.14:859,42,0	1/1:6,19:25:12.57:304,13,0	1/1:4,14:18:30.10:631,30,0	1/1:0,16:16:42.14:858,42,0	0/0:17,0:17:30.10:0,30,991	0/0:16,0:16:39.13:0,39,1289	0/0:22,0:22:57.20:0,57,1827	0/0:24,0:24:48.12:0,48,1401	0/0:18,0:18:42.14:0,42,1387	0/0:27,0:27:57.20:0,57,1841	0/0:28,0:28:60.21:0,60,1934	0/0:19,0:19:45.15:0,45,1473	1/1:1,16:17:21.07:442,21,0	1/1:10,14:24:19.88:440,20,0	1/1:7,10:17:3.01:63,3,0	1/1:4,9:13:24.08:505,24,0	0/1:19,3:22:99:118,0,1390	0/0:24,0:24:63.22:0,63,2080	0/0:18,0:18:45.15:0,45,1487
chr10	73574766	.	TAC	T	697.63	PASS	AB=0.990;AC=9;AF=0.161;AN=56;BaseQRankSum=5.393;DP=554;FS=21.729;HRun=0;HaplotypeScore=87.3439;InbreedingCoeff=0.5220;MQ=71.17;MQ0=8;MQRankSum=-0.197;QD=5.63;ReadPosRankSum=-2.950;VQSLOD=0.7897;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:51.03:0,51,690	0/0:7,0:7:20.99:0,21,312	0/0:41,0:15:21.80:0,22,215	0/0:39,0:19:12.16:0,12,311	0/0:25,0:25:47.55:0,48,464	0/0:13,0:13:32.95:0,33,451	0/0:15,0:15:45.11:0,45,669	0/0:28,0:28:68.92:0,69,826	0/0:19,0:19:47.18:0,47,555	1/1:14,2:16:27.36:289,27,0	1/1:21,1:21:21.08:220,21,0	0/0:16,0:15:1.41:0,1,233	0/0:13,0:13:3.40:0,3,158	0/0:11,0:11:32.04:0,32,345	0/0:15,0:15:41.93:0,42,477	0/0:17,0:17:50:0,50,673	0/0:24,0:25:50.49:0,50,831	0/0:28,0:28:71.21:0,71,1030	0/0:19,0:19:43.84:0,44,273	0/0:20,0:20:51.37:0,51,349	0/0:12,0:12:26.59:0,27,210	0/1:13,0:13:91.67:92,0,189	0/1:21,0:20:18.97:19,0,209	0/0:9,0:9:10.83:0,11,108	1/1:17,2:19:26.15:212,26,0	0/0:20,0:19:24.80:0,25,302	0/1:32,1:32:21.55:22,0,284	0/0:15,0:15:27.14:0,27,225
chr10	73574768	.	CA	C	1485.92	PASS	AB=0.794;AC=15;AF=0.268;AN=56;BaseQRankSum=2.120;DP=585;FS=0.848;HRun=14;HaplotypeScore=85.1439;InbreedingCoeff=0.2862;MQ=68.29;MQ0=10;MQRankSum=-0.744;QD=5.76;ReadPosRankSum=1.564;VQSLOD=2.7988;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,1:23:25.23:0,25,315	0/0:7,1:8:0.44:0,0,146	0/1:49,0:14:8.49:8,0,107	0/0:43,1:20:26.02:0,26,185	0/1:8,15:25:26.70:223,0,27	0/0:11,1:13:9.39:0,9,196	0/0:15,0:15:39.04:0,39,362	0/0:24,2:27:10.13:0,10,340	0/0:16,1:17:21.05:0,21,295	0/1:17,0:17:43.97:51,0,44	0/1:22,0:21:33.56:133,0,34	0/0:5,0:16:16.03:0,16,96	0/0:8,0:13:9.10:0,9,54	0/0:13,0:14:35.68:0,36,296	0/0:16,1:17:12.45:0,12,255	0/0:18,0:18:44.81:0,45,390	0/0:23,3:26:5.64:0,6,444	0/0:27,0:29:65.68:0,66,569	1/1:8,11:19:28.61:203,29,0	1/1:7,15:22:19.56:277,20,0	0/1:7,6:14:10.79:84,0,11	0/0:12,0:15:14.97:0,15,82	0/0:4,0:20:2.57:0,3,41	0/0:3,0:9:8.99:0,9,44	1/1:18,0:18:22.84:104,23,0	0/1:8,12:21:8.15:195,0,8	1/1:16,18:34:4.44:286,4,0	0/1:8,6:15:6.14:92,0,6
chr10	73575446	.	C	CG	395.71	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.785;DP=312;FS=2.136;HRun=7;HaplotypeScore=39.3841;InbreedingCoeff=0.3598;MQ=81.43;MQ0=0;MQRankSum=-2.113;QD=18.84;ReadPosRankSum=-1.231;VQSLOD=2.6908;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:21:42.09:489,42,0	0/0:5,0:5:9.01:0,9,86	0/0:7,0:7:0.04:0,0,75	0/0:9,0:9:18.47:0,18,171	0/0:7,0:7:18.03:0,18,173	0/0:6,0:6:15.02:0,15,144	0/0:30,0:30:78.10:0,78,746	0/0:3,0:3:3:0,3,29	0/0:5,0:5:12.02:0,12,116	0/0:8,0:8:12.01:0,12,116	0/0:9,0:9:24.04:0,24,231	0/0:6,0:6:9.01:0,9,87	0/0:2,0:2:6.01:0,6,58	0/0:6,0:6:12.02:0,12,116	0/0:2,0:2:6.01:0,6,58	0/0:4,0:4:9.01:0,9,88	0/0:20,0:20:41.57:0,42,454	0/0:23,0:23:54.07:0,54,521	0/0:20,0:20:30.03:0,30,289	0/0:3,0:3:2.04:0,2,6	0/0:63,1:64:78.80:0,79,1260	0/0:7,0:7:6.01:0,6,58	0/0:2,0:2:3:0,3,28	0/0:18,0:18:51.08:0,51,491	0/0:7,0:7:12:0,12,116	0/0:12,0:12:30.05:0,30,289	0/0:4,0:4:11.99:0,12,108	0/0:2,0:2:3:0,3,29
chr10	73575577	.	GC	G	1476.90	PASS	AB=0.895;AC=15;AF=0.300;AN=50;BaseQRankSum=7.916;DP=326;FS=3.342;HRun=9;HaplotypeScore=39.0159;InbreedingCoeff=0.7481;MQ=78.02;MQ0=0;MQRankSum=-0.892;QD=14.34;ReadPosRankSum=1.018;VQSLOD=3.0608;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,11:13:24.01:219,24,0	0/0:2,0:2:3.01:0,3,35	0/0:10,0:10:3.26:0,3,126	0/0:7,0:7:9:0,9,85	0/0:2,0:2:3.01:0,3,35	0/0:4,0:4:6.02:0,6,69	0/0:25,0:25:39.59:0,40,451	0/0:4,0:4:6.02:0,6,69	0/0:6,0:6:18.05:0,18,208	1/1:2,10:12:26.97:247,27,0	1/1:0,4:4:12.01:110,12,0	1/1:2,12:14:33.02:302,33,0	1/1:3,11:14:30.01:274,30,0	0/0:9,0:9:21.01:0,21,218	0/0:7,0:7:18.05:0,18,208	0/0:5,0:5:9.03:0,9,104	0/0:18,1:19:23.62:0,24,498	0/0:21,0:21:48.14:0,48,554	0/0:13,0:13:33.06:0,33,353	./.	0/0:71,1:73:99:0,137,1831	./.	./.	1/1:4,19:23:39.02:357,39,0	1/1:1,5:6:15:135,15,0	0/1:15,2:17:15.83:16,0,329	0/0:5,0:5:12.04:0,12,138	0/0:9,0:9:21.06:0,21,241
chr10	73576858	.	GGTGTGT	G	862.10	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=5.843;DP=624;FS=26.799;HRun=0;HaplotypeScore=136.6225;InbreedingCoeff=0.8243;MQ=68.78;MQ0=9;MQRankSum=-4.520;QD=10.64;ReadPosRankSum=2.106;VQSLOD=1.3240;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:31:43.55:0,44,537	0/0:7,0:7:12.04:0,12,340	./.	./.	0/0:10,0:16:11.38:0,11,278	0/0:15,0:15:27.56:0,28,762	0/0:18,0:21:30.10:0,30,609	0/0:24,0:24:9.03:0,9,134	0/0:24,0:25:39.60:0,40,942	0/0:21,0:32:56.76:0,57,1263	0/0:11,0:17:21.05:0,21,443	1/1:14,10:24:12.93:246,13,0	1/1:16,10:26:30.99:613,31,0	0/0:21,0:23:20.25:0,20,469	0/0:27,0:27:36.11:0,36,859	0/0:26,0:32:48.15:0,48,1028	0/0:36,0:38:73.08:0,73,1604	0/0:7,0:13:24.06:0,24,559	0/0:13,0:14:20.98:0,21,394	0/0:18,0:18:23.21:0,23,651	0/0:41,0:41:51.17:0,51,1222	1/1:10,6:18:7.66:81,8,0	1/1:8,5:13:3.01:61,3,0	0/0:18,7:24:0:0,0,0	0/0:7,0:14:9.03:0,9,202	0/0:22,0:21:27.08:0,27,546	0/0:23,0:23:28.64:0,29,704	0/0:9,0:10:15.05:0,15,279
chr10	73578396	.	C	CT	3076.80	PASS	AB=0.571;AC=17;AF=0.304;AN=56;BaseQRankSum=-9.690;DP=474;FS=29.991;HRun=10;HaplotypeScore=50.1629;InbreedingCoeff=0.8881;MQ=68.40;MQ0=0;MQRankSum=0.381;QD=20.65;ReadPosRankSum=2.216;VQSLOD=2.3648;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,22:27:54.14:576,54,0	0/0:5,0:5:14.98:0,15,123	0/0:9,0:9:0.79:0,1,125	0/0:9,0:9:19.05:0,19,134	0/0:17,0:17:35.94:0,36,296	0/0:26,0:27:71.88:0,72,586	0/0:16,0:16:32.93:0,33,271	0/0:26,0:26:31.13:0,31,414	0/0:17,0:17:47.92:0,48,389	1/1:3,16:19:45.09:470,45,0	1/1:2,16:19:44.95:462,45,0	1/1:6,9:15:24.06:256,24,0	1/1:3,10:13:27.04:276,27,0	0/0:11,0:11:23.96:0,24,197	0/0:19,0:19:50.91:0,51,415	0/0:17,0:17:47.92:0,48,391	0/0:21,0:21:47.90:0,48,391	0/0:21,0:21:50.70:0,51,403	0/0:22,1:23:47.86:0,48,385	0/0:22,0:22:59.92:0,60,492	0/0:14,0:14:32.95:0,33,271	1/1:3,4:7:12.03:128,12,0	0/1:2,6:8:3.54:171,0,4	1/1:4,17:21:17.46:391,17,0	1/1:1,19:20:32.50:551,32,0	0/0:19,1:20:12.94:0,13,310	0/0:25,0:26:70.94:0,71,569	0/0:5,0:5:14.98:0,15,123
chr10	73578525	.	G	GA	5752.04	PASS	AB=0.887;AC=40;AF=0.714;AN=56;BaseQRankSum=-5.775;DP=381;FS=7.508;HRun=10;HaplotypeScore=113.1924;InbreedingCoeff=0.6183;MQ=62.94;MQ0=2;MQRankSum=-0.681;QD=17.86;ReadPosRankSum=1.814;VQSLOD=4.4447;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:22.87:0,23,138	1/1:5,10:15:25.23:341,25,0	0/0:15,0:9:5.74:0,6,102	0/1:13,0:6:2.41:2,0,26	1/1:9,12:21:50.60:494,51,0	1/1:2,19:22:57.01:591,57,0	1/1:2,7:9:18.05:192,18,0	1/1:10,8:17:26.59:286,27,0	1/1:3,5:8:16.85:165,17,0	0/1:11,0:10:4.44:4,0,16	1/1:7,0:18:22.84:121,23,0	0/0:4,0:4:2.80:0,3,18	0/1:11,1:12:9.92:10,0,96	1/1:2,9:11:21.05:223,21,0	1/1:2,4:6:12.03:128,12,0	1/1:2,8:10:21.05:223,21,0	1/1:5,20:25:63.16:669,63,0	1/1:4,11:15:25.86:253,26,0	0/1:11,9:20:12.96:278,0,13	1/1:5,17:23:50.93:512,51,0	1/1:1,4:5:6.49:65,6,0	0/0:12,0:12:8.95:0,9,97	0/0:6,0:6:11.44:0,11,74	0/0:8,0:8:11.20:0,11,63	1/1:4,1:17:14.68:72,15,0	1/1:0,10:10:29.94:293,30,0	1/1:3,22:25:63.16:671,63,0	1/1:1,6:7:15.04:160,15,0
chr10	73579268	.	CTA	C	674.19	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=2.352;DP=478;FS=6.180;HRun=0;HaplotypeScore=70.2096;InbreedingCoeff=0.8153;MQ=62.57;MQ0=20;MQRankSum=3.008;QD=12.04;ReadPosRankSum=0.974;VQSLOD=2.8557;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:53.78:0,54,416	0/0:5,0:5:12.01:0,12,161	0/0:49,0:24:30.84:0,31,475	0/0:53,0:28:71.89:0,72,676	0/0:14,0:14:26.97:0,27,265	0/0:7,0:7:21.01:0,21,250	0/0:21,0:21:56.86:0,57,553	0/0:19,0:18:47.86:0,48,403	0/0:11,0:11:24.01:0,24,283	0/0:14,0:14:37.81:0,38,329	0/0:8,0:8:8.36:0,8,58	1/1:1,10:11:3.01:44,3,0	1/1:0,8:8:2.89:43,3,0	0/0:9,0:9:18.85:0,19,147	0/0:11,0:11:20.97:0,21,195	0/0:13,0:13:36.01:0,36,406	0/0:25,0:25:65.83:0,66,726	0/0:22,0:21:44.75:0,45,305	0/0:16,0:16:35.75:0,36,378	0/0:15,0:14:26.92:0,27,241	0/0:23,0:23:65.94:0,66,711	./.	1/1:12,0:12:26.95:220,27,0	1/1:23,2:23:59.76:507,60,0	0/0:15,0:15:23.25:0,23,171	0/0:17,0:17:2.88:0,3,413	0/0:13,0:13:32.97:0,33,359	0/0:13,0:13:35.99:0,36,407
chr10	73579271	.	TACACACACACACACACAC	T	353.68	PASS	AB=1.000;AC=3;AF=0.056;AN=54;BaseQRankSum=2.613;DP=513;FS=0.000;HRun=0;HaplotypeScore=199.1041;InbreedingCoeff=0.6004;MQ=60.85;MQ0=22;MQRankSum=-2.359;QD=11.05;ReadPosRankSum=0.035;VQSLOD=2.4218;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:27.09:0,27,929	0/0:4,0:4:9.03:0,9,684	0/0:48,0:23:6.02:0,6,82	0/0:54,0:28:24.08:0,24,444	0/0:14,0:14:18.06:0,18,918	0/0:9,0:9:21.07:0,21,1280	0/0:21,0:21:24.08:0,24,1419	0/0:20,0:19:24.07:0,24,796	0/0:10,0:10:18.06:0,18,1145	0/0:12,0:14:27.09:0,27,1230	0/0:5,0:8:6.02:0,6,295	0/0:15,0:15:15.05:0,15,770	0/0:9,0:9:6.02:0,6,255	./.	0/0:13,0:13:18.06:0,18,998	0/0:13,0:15:21.07:0,21,1490	0/0:29,0:29:40.49:0,40,2491	1/1:15,10:24:9.03:436,9,0	0/0:12,0:15:18.06:0,18,1037	0/0:15,0:16:18.06:0,18,1151	0/0:32,0:30:51.18:0,51,3446	0/1:7,0:7:0:0,0,0	0/0:13,0:13:12.04:0,12,660	0/0:26,0:24:24.08:0,24,1154	0/0:11,0:17:12.04:0,12,508	0/0:19,0:19:33.11:0,33,1748	0/0:14,0:14:17.65:0,18,850	0/0:14,0:14:21.07:0,21,1494
chr10	73579637	.	TC	T	1475.38	PASS	AB=1.000;AC=19;AF=0.365;AN=52;BaseQRankSum=6.795;DP=329;FS=12.336;HRun=2;HaplotypeScore=60.9615;InbreedingCoeff=0.8312;MQ=41.69;MQ0=38;MQRankSum=-6.174;QD=15.86;ReadPosRankSum=-1.985;VQSLOD=1.8779;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,5:10:5.98:58,6,0	0/0:6,0:5:12.02:0,12,139	./.	./.	0/0:19,0:17:33.11:0,33,472	0/0:12,0:11:27.06:0,27,351	0/0:9,0:5:5.99:0,6,64	0/0:26,0:25:69.07:0,69,884	0/0:7,0:7:15.05:0,15,214	1/1:3,4:5:14.84:168,15,0	1/1:0,9:9:27.04:329,27,0	1/1:8,3:10:29.83:258,30,0	1/1:1,4:5:15.01:174,15,0	0/0:9,0:7:20.83:0,21,235	0/0:13,0:13:15.02:0,15,179	0/0:9,0:9:27.09:0,27,387	0/0:22,1:21:9.16:0,9,527	0/0:28,0:26:57.19:0,57,818	0/0:10,0:8:21.02:0,21,254	0/0:17,0:16:29.98:0,30,330	0/0:13,0:11:27.01:0,27,342	1/1:1,3:4:11.95:117,12,0	1/1:5,6:9:23.95:251,24,0	1/1:2,6:5:5.97:57,6,0	1/1:1,8:8:18.06:232,18,0	0/1:14,0:13:29.08:29,0,344	0/0:14,0:14:27.06:0,27,364	0/0:12,0:9:15.05:0,15,211
chr10	73579671	.	TTCCTAGGCAAGCGCTC	T	5315.14	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=9.521;DP=338;FS=17.227;HRun=0;HaplotypeScore=137.8707;InbreedingCoeff=0.9172;MQ=48.02;MQ0=22;MQRankSum=-9.075;QD=81.77;ReadPosRankSum=2.573;VQSLOD=3.6026;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,8:9:9.03:431,9,0	0/0:4,0:4:12.04:0,12,960	0/0:2,0:1:2.84:0,3,14	./.	0/0:22,0:20:50.70:0,51,3936	0/0:16,0:15:39.09:0,39,2706	0/0:13,0:10:24.04:0,24,1633	0/0:15,0:13:33.08:0,33,1931	0/0:7,0:7:21.07:0,21,1589	0/0:8,0:7:21.07:0,21,1544	0/0:11,0:11:33.11:0,33,2474	1/1:1,16:16:33.11:1580,33,0	1/1:0,9:9:21.07:1006,21,0	0/0:11,0:10:30.10:0,30,2198	0/0:7,0:7:21.07:0,21,1529	0/0:11,0:11:33.11:0,33,2368	0/0:20,0:20:54.19:0,54,4234	0/0:26,0:25:50.98:0,51,3596	0/0:18,0:15:42.13:0,42,2444	0/0:17,0:16:45.15:0,45,3392	0/0:13,0:12:33.11:0,33,2106	1/1:0,9:9:21.07:1006,21,0	1/1:2,9:10:21.02:1005,21,0	1/1:2,5:5:6.02:287,6,0	0/0:10,0:10:18.06:0,18,1289	0/0:19,0:19:57.20:0,57,4436	0/0:12,0:12:36.12:0,36,2351	0/0:9,0:9:21.07:0,21,1522
chr10	73580342	.	T	TA	6090.99	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-13.007;DP=550;FS=12.854;HRun=5;HaplotypeScore=47.0165;InbreedingCoeff=0.9659;MQ=73.30;MQ0=1;MQRankSum=-0.436;QD=32.06;ReadPosRankSum=2.038;VQSLOD=4.3771;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:72.23:947,72,0	0/0:9,0:9:24.06:0,24,258	0/0:15,0:13:32.06:0,32,291	0/0:10,0:8:2.43:0,2,115	0/0:32,0:32:90.19:0,90,949	0/0:23,0:23:66.17:0,66,709	0/0:8,0:8:21.05:0,21,226	0/0:28,0:28:81.19:0,81,857	0/0:14,0:14:33.08:0,33,355	1/1:1,21:22:63.18:797,63,0	1/1:1,19:20:57.14:724,57,0	1/1:2,17:19:36.12:474,36,0	1/1:2,21:23:51.17:671,51,0	0/0:22,0:22:62.50:0,62,643	0/0:23,0:23:66.13:0,66,698	0/0:25,0:25:72.18:0,72,774	0/0:29,0:29:78.18:0,78,829	1/1:1,20:21:54.18:711,54,0	0/0:17,0:17:39.57:0,40,420	0/0:25,0:25:69.17:0,69,741	0/0:8,0:8:24.06:0,24,258	1/1:1,10:11:27.09:355,27,0	1/1:1,16:17:51.16:662,51,0	1/1:2,4:6:12.04:158,12,0	1/1:2,20:22:45.15:592,45,0	0/0:29,0:29:87.21:0,87,928	0/0:32,0:32:87.21:0,87,935	0/0:11,0:11:33.08:0,33,355
chr10	73581570	.	C	CTT	2613.82	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-1.813;DP=635;FS=0.451;HRun=11;HaplotypeScore=83.9178;InbreedingCoeff=0.8626;MQ=60.64;MQ0=7;MQRankSum=-2.065;QD=17.31;ReadPosRankSum=0.017;VQSLOD=2.5734;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,25:34:57.19:817,57,0	0/0:8,0:8:21.02:0,21,200	0/0:21,0:12:5.40:0,5,45	0/1:9,0:6:2.80:3,0,56	0/0:29,0:29:56.34:0,56,545	0/0:23,0:23:51.02:0,51,494	0/0:25,0:27:44.71:0,45,417	0/0:31,0:33:23.72:0,24,322	0/0:23,0:25:41.39:0,41,361	0/0:19,0:21:28.51:0,29,255	0/0:16,0:16:29.50:0,29,291	1/1:5,17:23:33.07:454,33,0	1/1:7,7:14:4.14:155,4,0	0/0:19,0:19:32.93:0,33,320	0/0:25,0:25:60.06:0,60,576	0/0:15,0:16:32.98:0,33,370	0/0:45,0:43:99:0,114,1083	0/0:23,0:28:41.02:0,41,446	0/0:30,0:30:38.57:0,39,359	0/0:15,0:17:23.69:0,24,215	0/0:16,0:16:35.99:0,36,348	1/1:2,20:24:49.89:631,50,0	1/1:7,15:23:7.90:345,8,0	1/1:8,13:20:27.09:386,27,0	0/0:19,0:21:23.92:0,24,332	0/0:20,0:22:35.64:0,36,381	0/0:24,0:26:46.01:0,46,487	0/0:9,0:11:20.71:0,21,236
chr10	73581776	.	TG	T	667.89	PASS	AB=0.609;AC=3;AF=0.054;AN=56;BaseQRankSum=10.220;DP=666;FS=0.000;HRun=1;HaplotypeScore=94.3338;InbreedingCoeff=-0.0578;MQ=68.34;MQ0=0;MQRankSum=-9.821;QD=9.97;ReadPosRankSum=0.629;VQSLOD=1.1019;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.22:0,90,1179	0/0:4,0:4:12.04:0,12,171	0/0:23,0:17:50.03:0,50,590	0/0:27,0:22:28.68:0,29,576	0/0:30,0:30:81.16:0,81,1121	0/0:27,0:27:81.24:0,81,1117	0/0:24,0:24:72.21:0,72,980	0/0:29,0:29:84.16:0,84,1083	0/0:28,0:28:81.23:0,81,1099	0/1:10,17:27:99:260,0,162	0/1:7,13:20:40.82:237,0,41	0/0:29,0:29:87.24:0,87,1165	0/0:33,0:33:96.28:0,96,1313	0/0:20,0:20:57.19:0,57,802	0/0:33,0:33:99:0,99,1318	0/0:26,0:26:78.25:0,78,1096	0/0:25,0:25:75.11:0,75,967	0/0:15,0:15:45.15:0,45,643	0/0:25,0:25:75.24:0,75,1041	0/0:23,0:23:65.97:0,66,895	0/0:21,0:21:63.19:0,63,880	0/0:13,0:13:39.11:0,39,531	0/0:18,0:18:54.18:0,54,738	0/0:23,0:23:69.21:0,69,952	0/1:7,13:20:53.15:271,0,53	0/0:20,2:22:28.27:0,28,754	0/0:34,0:34:99:0,99,1296	0/0:17,0:17:51.12:0,51,687
chr10	73581779	.	TTTTA	T	1199.49	PASS	AB=0.672;AC=4;AF=0.071;AN=56;BaseQRankSum=10.844;DP=667;FS=1.147;HRun=0;HaplotypeScore=132.0770;InbreedingCoeff=0.3129;MQ=66.98;MQ0=0;MQRankSum=-9.523;QD=14.63;ReadPosRankSum=1.595;VQSLOD=3.4126;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:89.53:0,90,1388	0/0:5,0:5:15.05:0,15,401	0/0:22,0:16:47.73:0,48,1063	0/0:26,0:21:53.13:0,53,1169	0/0:28,0:28:68.66:0,69,2098	0/0:27,0:27:81.28:0,81,2221	0/0:25,0:25:75.26:0,75,1994	0/0:27,0:27:78.27:0,78,2080	0/0:29,0:29:84.29:0,84,2290	0/1:10,17:27:36.35:531,0,36	0/1:7,13:20:1.41:361,0,1	0/0:28,0:28:83.78:0,84,1415	0/0:32,0:32:96.16:0,96,1755	0/0:21,0:21:60.21:0,60,1635	0/0:35,0:35:99:0,105,2742	0/0:27,0:27:81.28:0,81,2196	0/0:26,0:26:78.23:0,78,1995	0/0:16,0:16:48.16:0,48,1334	0/0:28,0:28:84.27:0,84,2146	0/0:24,0:24:66.70:0,67,1799	0/0:22,0:22:66.21:0,66,1779	0/0:15,0:15:36.75:0,37,655	0/0:18,0:18:53.96:0,54,965	0/0:23,0:23:69.02:0,69,1202	0/1:4,13:17:0.04:401,0,0	0/1:16,2:18:15.12:15,0,1312	0/0:34,0:34:99:0,102,2681	0/0:17,0:17:51.18:0,51,1382
chr10	73582029	.	C	CTT	2288.08	PASS	AB=0.621;AC=17;AF=0.304;AN=56;BaseQRankSum=4.307;DP=535;FS=8.684;HRun=11;HaplotypeScore=78.5007;InbreedingCoeff=0.8192;MQ=71.38;MQ0=0;MQRankSum=-1.244;QD=14.21;ReadPosRankSum=0.294;VQSLOD=1.7294;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:31:0.21:122,0,0	0/0:9,0:9:17.97:0,18,174	0/0:18,0:20:13.85:0,14,204	0/0:7,0:7:11.44:0,11,94	0/0:32,0:34:80.55:0,81,751	0/0:22,0:24:47.94:0,48,515	0/0:13,0:13:23.80:0,24,217	0/0:26,0:26:35.65:0,36,332	0/0:16,0:18:44.52:0,45,396	1/1:2,23:32:80.19:1008,80,0	1/1:2,9:14:35.51:424,36,0	0/1:6,1:18:29.57:86,0,30	1/1:1,0:11:22.46:77,22,0	0/0:18,0:18:41.97:0,42,394	0/0:23,0:23:44.98:0,45,436	0/0:24,0:24:57.03:0,57,553	0/0:19,0:20:50.78:0,51,477	0/0:23,0:23:63.08:0,63,611	0/0:13,0:18:8.25:0,8,202	0/0:26,0:29:59.62:0,60,663	0/0:3,0:5:14.50:0,15,111	1/1:2,0:6:7.96:37,8,0	1/1:2,0:17:8.72:91,9,0	1/1:2,0:7:12.35:43,12,0	1/1:3,17:24:48.26:595,48,0	0/0:24,0:24:54.05:0,54,524	0/0:26,0:26:69.06:0,69,669	0/0:11,0:13:20.71:0,21,236
chr10	73583735	.	AT	A	179.78	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.862;DP=534;FS=1.435;HRun=2;HaplotypeScore=45.9024;InbreedingCoeff=0.9884;MQ=77.72;MQ0=0;MQRankSum=-3.534;QD=22.47;ReadPosRankSum=1.535;VQSLOD=3.6264;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.15:0,51,739	0/0:12,0:12:36.12:0,36,539	0/0:12,0:12:36.12:0,36,540	0/0:12,0:12:33.11:0,33,486	0/0:24,0:24:72.24:0,72,1076	0/0:23,0:23:69.22:0,69,1014	0/0:7,0:7:21.06:0,21,296	0/0:24,0:24:66.22:0,66,971	0/0:22,0:21:66.22:0,66,983	0/0:35,0:35:99:0,105,1573	0/0:22,0:22:66.19:0,66,930	0/0:10,0:10:27.09:0,27,405	0/0:18,0:18:54.12:0,54,762	0/0:19,0:19:57.19:0,57,852	0/0:25,0:25:72.21:0,72,1022	0/0:27,0:27:78.26:0,78,1167	0/0:20,0:20:60.17:0,60,873	1/1:0,8:8:21.07:272,21,0	0/0:19,0:19:57.19:0,57,854	0/0:20,0:20:60.18:0,60,859	0/0:15,0:15:45.15:0,45,674	0/0:18,0:18:54.17:0,54,789	0/0:21,0:21:63.20:0,63,926	0/0:15,0:15:45.14:0,45,653	0/0:21,0:21:63.21:0,63,944	0/0:29,0:29:87.29:0,87,1302	0/0:31,0:31:93.31:0,93,1392	0/0:8,0:8:24.08:0,24,360
chr10	73584144	.	T	TC	1908.44	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.065;DP=445;FS=50.350;HRun=1;HaplotypeScore=70.8336;InbreedingCoeff=0.9905;MQ=84.64;MQ0=0;MQRankSum=-3.682;QD=38.95;ReadPosRankSum=2.010;VQSLOD=0.0659;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.22:0,78,983	0/0:5,0:5:15.05:0,15,195	0/0:14,0:14:38.83:0,39,458	0/0:17,0:17:39.06:0,39,462	0/0:15,0:15:45.15:0,45,584	0/0:8,0:7:24.08:0,24,312	0/0:21,0:21:63.19:0,63,804	0/0:30,0:30:84.26:0,84,1079	0/0:12,0:12:36.12:0,36,467	1/1:0,15:15:45.15:673,45,0	1/1:1,18:19:54.18:796,54,0	0/0:18,0:18:54.15:0,54,672	0/0:12,0:12:33.11:0,33,428	0/0:8,0:8:24.08:0,24,312	0/0:21,0:21:57.19:0,57,740	0/0:22,0:22:54.18:0,54,701	0/0:18,0:18:45.13:0,45,570	0/0:16,0:16:45.15:0,45,584	0/0:18,0:18:51.17:0,51,662	0/0:17,0:17:48.16:0,48,623	0/0:18,0:18:54.16:0,54,687	0/0:8,0:8:24.08:0,24,312	0/0:15,0:15:45.13:0,45,570	0/0:9,0:9:24.08:0,24,312	1/1:1,14:14:39.13:582,39,0	0/0:20,0:20:57.16:0,57,714	0/0:17,0:17:45.15:0,45,582	0/0:9,0:9:24.08:0,24,310
chr10	73584198	.	TG	T	13472.30	PASS	AB=0.786;AC=55;AF=0.982;AN=56;BaseQRankSum=-1.605;DP=371;FS=0.000;HRun=3;HaplotypeScore=46.0545;InbreedingCoeff=-0.0321;MQ=61.79;MQ0=1;MQRankSum=-1.711;QD=36.31;ReadPosRankSum=0.845;VQSLOD=5.0077;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:60.20:839,60,0	1/1:0,3:3:9.03:126,9,0	1/1:3,3:3:5.95:60,6,0	0/1:8,3:8:29.28:100,0,29	1/1:0,16:16:48.16:671,48,0	1/1:0,9:9:24.08:328,24,0	1/1:0,15:15:42.14:587,42,0	1/1:1,28:29:81.24:1094,81,0	1/1:0,8:8:18.06:251,18,0	1/1:2,10:12:30.10:419,30,0	1/1:2,19:21:54.14:727,54,0	1/1:0,9:9:27.09:378,27,0	1/1:0,7:7:18.06:251,18,0	1/1:0,11:11:30.10:419,30,0	1/1:0,15:15:39.13:545,39,0	1/1:0,15:15:39.13:545,39,0	1/1:0,20:20:54.18:752,54,0	1/1:0,14:14:42.14:587,42,0	1/1:2,13:15:39.12:521,39,0	1/1:0,13:13:39.13:545,39,0	1/1:0,20:20:57.19:792,57,0	1/1:0,4:4:12.04:168,12,0	1/1:0,17:17:48.07:671,48,0	1/1:0,13:13:33.11:461,33,0	1/1:0,12:11:30.01:375,30,0	1/1:1,13:14:42.14:587,42,0	1/1:0,17:17:45.15:629,45,0	1/1:0,1:1:3.01:42,3,0
chr10	73584330	.	CTTTTCTTTTT	C	3538.31	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=6.953;DP=487;FS=12.843;HRun=0;HaplotypeScore=140.1292;InbreedingCoeff=0.8991;MQ=62.07;MQ0=12;MQRankSum=-5.903;QD=29.24;ReadPosRankSum=3.733;VQSLOD=2.6244;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:21:33.11:997,33,0	0/0:5,0:5:15.05:0,15,454	0/1:28,0:12:0.43:0,0,253	0/0:34,0:14:13.83:0,14,275	0/0:21,0:21:51.01:0,51,1476	0/0:9,0:9:26.99:0,27,784	0/0:10,0:10:24.07:0,24,898	0/0:37,0:37:77.62:0,78,1983	0/0:12,0:12:27.06:0,27,930	0/0:14,0:24:48.19:0,48,675	0/0:7,0:19:29.93:0,30,642	1/1:2,16:17:18.06:509,18,0	1/1:0,9:9:18.06:537,18,0	0/0:8,0:8:12.01:0,12,360	0/0:12,0:12:30.08:0,30,964	0/0:23,0:23:60.17:0,60,2231	0/0:30,0:30:90.28:0,90,3195	0/0:12,0:12:27.04:0,27,1018	0/0:22,0:19:49.76:0,50,1291	0/0:16,0:16:45.14:0,45,1557	0/0:4,0:4:9.03:0,9,306	1/1:1,10:11:12.04:302,12,0	1/1:0,19:19:39.09:996,39,0	1/1:1,13:13:9.03:197,9,0	0/0:7,0:16:26.65:0,27,644	0/0:15,0:15:45.01:0,45,1590	0/0:21,0:20:63.02:0,63,2074	0/0:11,0:11:24.55:0,25,626
chr10	73584995	.	TC	T	1646.45	PASS	AB=0.952;AC=15;AF=0.278;AN=54;BaseQRankSum=7.190;DP=450;FS=10.347;HRun=1;HaplotypeScore=60.5675;InbreedingCoeff=0.7307;MQ=55.54;MQ0=9;MQRankSum=-3.141;QD=11.28;ReadPosRankSum=-3.604;VQSLOD=-0.2528;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:25:14.04:101,0,14	0/0:5,0:5:15.03:0,15,175	./.	0/1:10,2:7:1.10:18,0,1	0/0:16,0:16:29.49:0,29,477	0/0:14,0:14:37.80:0,38,419	0/0:12,0:12:32.82:0,33,386	0/0:32,0:31:7.88:0,8,820	0/0:11,0:11:21.06:0,21,265	1/1:8,10:16:41.60:516,42,0	1/1:16,4:19:42.58:406,43,0	0/1:14,0:14:3.41:68,0,3	1/1:10,0:10:14.56:131,15,0	0/0:8,0:8:24.06:0,24,297	0/0:16,0:16:31.98:0,32,489	0/0:12,0:12:32.20:0,32,373	0/0:32,0:31:54.07:0,54,779	0/0:14,0:14:39.04:0,39,465	0/0:29,0:25:16:0,16,653	0/0:13,0:13:30.47:0,30,365	0/0:6,0:5:14.80:0,15,143	1/1:14,0:13:13.15:92,13,0	0/0:10,0:10:2.15:0,2,8	1/1:16,1:16:6.29:68,6,0	1/1:9,6:13:36.05:430,36,0	0/0:24,0:24:63.71:0,64,840	0/0:21,0:21:30.23:0,30,566	0/0:24,0:22:41.03:0,41,419
chr10	73585144	.	AT	A	1022.07	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=5.501;DP=334;FS=0.000;HRun=9;HaplotypeScore=39.9812;InbreedingCoeff=0.8662;MQ=78.02;MQ0=0;MQRankSum=-0.137;QD=14.81;ReadPosRankSum=0.399;VQSLOD=2.9143;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:51.38:513,51,0	0/0:2,0:2:6.02:0,6,69	0/0:10,0:10:7.24:0,7,84	0/1:14,0:11:1.66:2,0,141	0/0:18,0:18:51.14:0,51,578	0/0:11,0:11:30.06:0,30,324	0/0:9,0:9:24.07:0,24,274	0/0:23,0:23:60.17:0,60,683	0/0:11,0:11:27.07:0,27,301	0/0:3,0:16:39.93:0,40,214	0/0:2,0:10:25.69:0,26,135	1/1:1,8:9:21.01:192,21,0	1/1:0,5:5:15.01:137,15,0	0/0:9,0:9:27.07:0,27,302	0/0:7,0:7:18.05:0,18,208	0/0:3,0:3:9.03:0,9,104	0/0:27,0:27:78.23:0,78,900	0/0:20,0:20:60.13:0,60,658	0/0:13,0:13:30.09:0,30,346	0/0:9,0:9:24.07:0,24,277	0/0:11,0:11:30.04:0,30,321	1/1:0,4:4:9:82,9,0	1/1:0,5:5:12.01:110,12,0	1/1:1,7:8:18.01:165,18,0	0/0:0,0:15:39.80:0,40,202	0/0:18,0:18:48.14:0,48,546	0/0:15,0:15:42.12:0,42,484	0/0:8,0:8:24.07:0,24,276
chr10	73585311	.	CTAT	C	441.35	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.086;DP=331;FS=2.525;HRun=0;HaplotypeScore=44.5890;InbreedingCoeff=0.6587;MQ=63.86;MQ0=0;MQRankSum=-0.388;QD=23.23;ReadPosRankSum=0.905;VQSLOD=3.4082;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:48.15:0,48,950	0/0:4,0:4:12.04:0,12,254	0/0:10,0:7:12.02:0,12,197	0/0:13,0:11:17.95:0,18,274	0/0:20,0:20:51.17:0,51,1054	0/0:13,0:13:36.12:0,36,760	0/0:3,0:3:9.03:0,9,184	0/0:37,0:37:96.31:0,96,1866	0/0:7,0:7:18.05:0,18,327	0/0:8,0:8:21.05:0,21,371	0/0:13,0:13:24.08:0,24,493	0/0:10,0:10:27.09:0,27,542	0/0:7,0:7:12.04:0,12,251	0/0:8,0:8:21.06:0,21,391	0/0:6,0:6:12.04:0,12,254	0/0:8,0:8:24.05:0,24,431	0/0:23,0:23:60.21:0,60,1213	1/1:4,15:19:36.12:536,36,0	0/0:15,0:15:45.15:0,45,911	0/0:8,0:8:21.07:0,21,442	0/0:4,0:4:6.02:0,6,111	0/0:3,0:3:9.03:0,9,191	0/0:10,0:10:26.96:0,27,469	0/0:2,0:2:6.02:0,6,127	0/0:6,0:6:15.05:0,15,292	0/0:21,0:21:57.20:0,57,1199	0/0:18,0:18:42.12:0,42,824	0/0:16,0:16:36.12:0,36,602
chr10	73586169	.	GT	G	1610.28	PASS	AB=0.887;AC=18;AF=0.321;AN=56;BaseQRankSum=7.924;DP=562;FS=0.860;HRun=12;HaplotypeScore=69.0947;InbreedingCoeff=0.6156;MQ=75.96;MQ0=0;MQRankSum=-1.089;QD=8.61;ReadPosRankSum=3.293;VQSLOD=2.7573;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,19:28:25.38:370,25,0	0/1:4,1:5:11.21:11,0,79	0/0:23,0:20:12.77:0,13,196	0/0:19,0:16:6.82:0,7,80	0/1:13,2:15:7.42:7,0,285	0/0:25,1:26:45.88:0,46,632	0/0:17,0:17:45.09:0,45,457	0/1:32,2:34:2.60:3,0,496	0/0:15,0:15:39.07:0,39,391	0/0:19,1:23:36.35:0,36,496	0/0:21,0:24:56.41:0,56,512	1/1:4,12:16:20.65:240,21,0	1/1:4,11:15:2.43:202,2,0	0/0:14,1:15:12.82:0,13,299	0/0:25,2:28:8.51:0,9,604	0/0:17,0:17:44.92:0,45,435	0/0:24,1:28:48.72:0,49,648	1/1:4,10:14:2.83:202,3,0	0/1:21,3:24:18.63:19,0,362	0/0:33,2:37:23.19:0,23,744	0/0:13,0:15:38.72:0,39,351	1/1:1,11:12:32.87:255,33,0	1/1:1,16:17:47.82:371,48,0	1/1:1,6:7:14.94:116,15,0	0/0:14,0:15:32.90:0,33,319	0/0:21,0:21:54.11:0,54,548	0/0:33,0:35:63.46:0,63,747	0/0:12,0:14:29.73:0,30,272
chr10	73586556	.	A	AC	393.43	PASS	AB=0.579;AC=11;AF=0.196;AN=56;BaseQRankSum=5.915;DP=494;FS=1.888;HRun=2;HaplotypeScore=62.7186;InbreedingCoeff=0.7878;MQ=73.97;MQ0=1;MQRankSum=-2.175;QD=5.11;ReadPosRankSum=-1.132;VQSLOD=0.2567;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,9:13:6.90:73,7,0	0/0:6,0:6:18.06:0,18,223	0/0:19,0:19:38.90:0,39,488	0/0:14,0:13:12.31:0,12,323	0/0:24,0:24:69.19:0,69,826	0/0:24,0:24:69.22:0,69,855	0/0:20,0:20:57.18:0,57,703	0/0:24,0:24:66.16:0,66,766	0/0:14,0:14:42.13:0,42,520	0/0:19,0:19:45.26:0,45,264	0/0:17,0:17:32.21:0,32,163	1/1:0,14:14:3.01:34,3,0	0/1:3,7:11:7.20:79,0,7	0/0:22,0:22:66.19:0,66,803	0/0:14,0:14:42.13:0,42,520	0/0:31,0:31:93.28:0,93,1139	0/0:10,0:10:30.09:0,30,370	0/0:9,0:9:27.08:0,27,333	0/0:23,0:23:57.18:0,57,705	0/0:20,0:20:57.15:0,57,680	0/0:20,0:20:60.19:0,60,742	1/1:2,7:10:11.99:125,12,0	1/1:5,1:6:4.27:64,4,0	1/1:5,18:23:13.56:173,14,0	0/0:19,0:19:34.63:0,35,192	0/0:25,0:25:69.22:0,69,853	0/0:26,0:26:78.25:0,78,964	0/0:17,0:17:48.15:0,48,594
chr10	73586899	.	AT	A	1039.14	PASS	AB=0.844;AC=8;AF=0.143;AN=56;BaseQRankSum=8.663;DP=593;FS=6.441;HRun=11;HaplotypeScore=58.8038;InbreedingCoeff=0.7259;MQ=68.88;MQ0=0;MQRankSum=0.192;QD=12.99;ReadPosRankSum=1.607;VQSLOD=3.4827;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,1:41:89.58:0,90,1122	0/0:6,0:6:18.03:0,18,184	0/0:13,0:11:6.25:0,6,145	0/1:9,2:12:28.87:29,0,94	0/0:30,0:30:84.18:0,84,880	0/0:30,0:30:84.20:0,84,889	0/0:16,0:16:42.11:0,42,447	0/0:39,3:42:10.13:0,10,690	0/0:17,0:17:45.11:0,45,480	1/1:3,16:19:47.94:394,48,0	1/1:2,23:25:59.90:493,60,0	0/0:14,0:14:36.09:0,36,384	0/0:19,1:20:26.44:0,26,474	0/0:9,0:10:26.90:0,27,270	0/0:26,0:26:78.16:0,78,811	0/0:22,1:25:35.17:0,35,547	0/0:29,2:31:37.92:0,38,807	0/0:15,0:15:39.10:0,39,416	0/0:13,0:13:33.08:0,33,351	0/0:33,0:34:80.89:0,81,801	0/0:20,0:20:54.13:0,54,569	0/0:24,0:24:60.15:0,60,639	0/0:25,0:25:63.14:0,63,664	0/0:10,0:10:27.07:0,27,288	1/1:1,15:16:32.96:271,33,0	0/0:21,2:24:19.71:0,20,598	0/0:24,2:26:25.88:0,26,674	0/1:7,1:8:0.60:1,0,192
chr10	73587054	.	TG	T	2517.58	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.124;DP=653;FS=1.026;HRun=3;HaplotypeScore=59.9873;InbreedingCoeff=0.9991;MQ=74.93;MQ0=0;MQRankSum=-1.836;QD=33.57;ReadPosRankSum=2.860;VQSLOD=4.1509;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1451	0/0:9,0:9:27.09:0,27,389	0/0:18,0:17:51.17:0,51,729	0/0:16,0:15:38.58:0,39,490	0/0:33,0:33:96.32:0,96,1380	0/0:23,0:23:57.18:0,57,802	0/0:21,0:21:63.20:0,63,885	0/0:32,0:32:96.31:0,96,1366	0/0:21,0:21:63.19:0,63,886	1/1:0,29:29:87.27:1079,87,0	1/1:2,21:23:63.16:764,63,0	0/0:18,0:18:51.15:0,51,697	0/0:32,0:32:96.32:0,96,1380	0/0:23,0:23:69.23:0,69,994	0/0:31,0:31:87.29:0,87,1253	0/0:33,0:33:96.32:0,96,1381	0/0:14,0:14:42.12:0,42,570	0/0:11,0:11:27.06:0,27,367	0/0:22,0:22:60.19:0,60,845	0/0:28,0:28:84.28:0,84,1209	0/0:27,0:27:78.25:0,78,1105	0/0:23,0:23:69.23:0,69,993	0/0:20,0:20:57.19:0,57,821	0/0:17,0:17:51.17:0,51,733	1/1:0,23:23:66.21:818,66,0	0/0:25,0:25:72.23:0,72,1021	0/0:33,0:33:96.32:0,96,1382	0/0:11,0:11:33.11:0,33,475
chr10	73587282	.	G	GT	11237.83	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-17.073;DP=811;FS=1.519;HRun=2;HaplotypeScore=74.4085;InbreedingCoeff=0.9998;MQ=88.87;MQ0=0;MQRankSum=-1.619;QD=40.86;ReadPosRankSum=2.720;VQSLOD=5.1919;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:96.32:1382,96,0	0/0:13,0:13:39.12:0,39,484	0/0:33,0:33:93.18:0,93,1129	0/0:25,0:25:63.20:0,63,780	0/0:40,0:40:99:0,111,1375	0/0:32,0:32:96.30:0,96,1190	0/0:17,0:17:48.15:0,48,593	0/0:29,0:29:87.25:0,87,1054	0/0:34,0:34:96.29:0,96,1175	1/1:2,26:28:78.25:1104,78,0	1/1:0,21:21:63.17:884,63,0	1/1:0,27:27:75.25:1080,75,0	1/1:2,42:44:99:1799,126,0	0/0:29,0:29:81.25:0,81,1003	0/0:35,0:35:99:0,99,1227	0/0:41,0:41:99:0,123,1511	0/0:20,0:20:60.19:0,60,743	0/0:11,0:11:30.09:0,30,372	0/0:18,0:18:54.17:0,54,668	0/0:39,0:39:99:0,117,1437	0/0:48,0:48:99:0,138,1709	1/1:0,36:36:99:1489,105,0	1/1:0,32:32:96.32:1383,96,0	1/1:1,20:21:57.19:821,57,0	1/1:2,31:33:90.30:1296,90,0	0/0:29,0:29:81.25:0,81,1004	0/0:28,0:28:81.22:0,81,977	0/0:15,0:15:28.42:0,28,470
chr10	73588352	.	A	ACTCCCTC	19655.84	PASS	AB=0.931;AC=19;AF=0.339;AN=56;BaseQRankSum=-5.274;DP=624;FS=3.333;HRun=0;HaplotypeScore=133.8114;InbreedingCoeff=0.9173;MQ=82.79;MQ0=0;MQRankSum=-18.277;QD=84.72;ReadPosRankSum=1.094;VQSLOD=5.2778;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,10:24:33.11:1247,33,0	0/0:5,0:5:15.05:0,15,396	0/0:21,0:21:60.21:0,60,1468	0/0:22,0:22:59.97:0,60,1392	0/0:30,0:30:87.30:0,87,2284	0/0:20,0:20:57.20:0,57,1473	0/0:21,0:21:57.20:0,57,1464	0/0:32,0:32:90.29:0,90,2234	0/0:31,0:31:90.31:0,90,2368	1/1:7,19:27:78.25:2978,78,0	1/1:7,14:21:54.19:2088,54,0	1/1:6,13:19:54.19:2020,54,0	1/1:6,22:31:75.26:2946,75,0	0/0:20,0:20:57.16:0,57,1386	0/0:21,0:21:63.22:0,63,1631	0/0:25,0:25:75.24:0,75,1915	0/0:24,0:24:72.23:0,72,1843	0/0:9,0:9:24.08:0,24,617	0/0:15,0:15:45.15:0,45,1178	0/0:34,0:34:99:0,99,2576	0/0:26,0:26:78.27:0,78,2056	1/1:3,22:26:69.24:2738,69,0	1/1:2,18:21:54.06:2072,54,0	1/1:5,7:13:33.11:1294,33,0	1/1:6,15:23:53.78:2110,54,0	0/1:25,2:27:99:164,0,1714	0/0:27,0:27:81.26:0,81,2075	0/0:9,0:9:23.87:0,24,567
chr10	73589075	.	A	ACGCGCGCGCATG	1545.18	PASS	AB=1.000;AC=12;AF=0.222;AN=54;BaseQRankSum=4.250;DP=439;FS=0.000;HRun=0;HaplotypeScore=157.7872;InbreedingCoeff=0.6062;MQ=79.07;MQ0=3;MQRankSum=-5.030;QD=13.92;ReadPosRankSum=-2.177;VQSLOD=1.8058;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:8.93:148,9,0	0/0:8,0:8:24.08:0,24,839	0/0:13,0:10:12.03:0,12,277	0/1:26,0:23:3.15:3,0,366	0/0:5,0:5:9.03:0,9,325	0/0:16,0:16:35.97:0,36,1152	0/0:29,0:28:72.21:0,72,2268	0/0:16,0:16:30.08:0,30,789	0/0:20,0:20:45.06:0,45,1256	1/1:25,0:24:56.93:1245,57,0	0/0:10,0:10:0.36:0,0,1	1/1:11,0:11:6.02:187,6,0	1/1:7,0:7:3.01:33,3,0	0/0:18,0:18:36.01:0,36,988	0/0:16,0:16:33.58:0,34,998	0/0:17,0:17:39.13:0,39,1379	0/0:14,0:14:33.11:0,33,1095	0/0:17,0:17:5.88:0,6,93	0/0:14,0:14:24:0,24,678	0/0:12,0:12:33.05:0,33,957	0/0:34,0:33:72.23:0,72,2317	0/0:5,0:5:0:0,0,0	./.	0/0:12,7:19:0.94:0,1,2	1/1:8,0:8:2.99:23,3,0	0/0:12,0:12:14.29:0,14,541	0/0:17,0:17:35.97:0,36,1236	0/1:4,0:4:53.96:54,0,124
chr10	73589090	.	G	GAGAC	221.23	PASS	AB=1.000;AC=4;AF=0.087;AN=46;BaseQRankSum=1.920;DP=388;FS=2.632;HRun=0;HaplotypeScore=73.4196;InbreedingCoeff=0.3030;MQ=55.02;MQ0=17;MQRankSum=-4.328;QD=5.27;ReadPosRankSum=-0.798;VQSLOD=1.5763;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:2.18:0,2,7	0/0:10,0:10:17.94:0,18,146	0/0:10,0:2:2.90:0,3,16	0/1:13,0:9:17.25:17,0,42	0/0:7,0:7:8.73:0,9,65	0/0:15,0:15:32.82:0,33,255	0/0:29,0:26:59.73:0,60,485	0/0:15,0:15:30.82:0,31,246	0/0:16,0:17:32.92:0,33,305	0/1:14,0:14:29.93:139,0,30	./.	0/0:4,0:4:1.27:0,1,11	0/0:1,0:1:0:0,0,0	0/0:15,0:18:32.95:0,33,294	0/0:17,0:17:29.57:0,30,242	0/0:17,0:18:38.93:0,39,363	0/0:13,0:13:32.87:0,33,274	1/1:0,14:15:5.91:166,6,0	0/0:17,0:16:27.21:0,27,205	0/0:10,0:10:23.18:0,23,177	0/0:44,0:41:67.44:0,67,518	./.	./.	./.	./.	0/0:10,0:9:20.44:0,20,165	0/0:16,0:16:35.65:0,36,269	0/0:8,0:7:10.55:0,11,127
chr10	73590359	.	C	CTT	149.38	PASS	AB=1.000;AC=11;AF=0.250;AN=44;BaseQRankSum=3.447;DP=75;FS=0.000;HRun=0;HaplotypeScore=19.9035;InbreedingCoeff=0.4416;MQ=107.71;MQ0=1;MQRankSum=-2.323;QD=8.79;ReadPosRankSum=-1.447;VQSLOD=2.4082;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:7:10.43:15,0,10	0/0:2,0:2:6.01:0,6,70	0/0:4,0:4:0.76:0,1,47	0/0:10,0:9:17.19:0,17,292	0/0:5,0:5:12.04:0,12,182	0/0:3,0:3:8.99:0,9,118	0/0:5,0:5:15.05:0,15,245	0/0:4,0:4:12:0,12,164	./.	./.	1/1:3,0:3:5.05:43,5,0	1/1:1,1:2:5.05:45,5,0	./.	0/0:2,0:2:6:0,6,71	0/0:1,0:1:3.01:0,3,49	./.	0/0:5,0:5:12.04:0,12,179	0/0:1,0:1:3.01:0,3,47	0/0:5,0:5:12.03:0,12,159	0/0:3,0:3:9.02:0,9,121	0/0:3,0:3:6.02:0,6,98	1/1:0,1:1:3.01:36,3,0	1/1:2,1:3:9.02:101,9,0	./.	1/1:1,0:1:3.01:40,3,0	./.	0/0:1,0:1:3.01:0,3,49	0/0:1,0:1:3.01:0,3,49
chr10	73593209	.	G	GA	2766.02	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.774;DP=703;FS=1.487;HRun=4;HaplotypeScore=65.8273;InbreedingCoeff=0.9991;MQ=81.53;MQ0=0;MQRankSum=-1.412;QD=37.38;ReadPosRankSum=-0.516;VQSLOD=3.3685;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,1531	0/0:14,0:14:39.08:0,39,430	0/0:22,0:23:57.16:0,57,644	0/0:15,0:15:42.12:0,42,471	0/0:35,0:35:99:0,105,1191	0/0:19,0:19:57.16:0,57,647	0/0:30,0:30:90.26:0,90,1021	0/0:28,0:28:75.20:0,75,835	0/0:27,0:27:78.22:0,78,885	1/1:1,29:31:90.27:1193,90,0	1/1:2,12:14:39.13:526,39,0	0/0:29,0:29:81.23:0,81,918	0/0:28,0:28:78.21:0,78,874	0/0:22,0:22:66.19:0,66,749	0/0:35,0:35:99:0,105,1182	0/0:31,0:31:87.24:0,87,978	0/0:27,0:27:75.21:0,75,851	0/0:14,0:14:33.09:0,33,374	0/0:15,0:15:42.08:0,42,443	0/0:30,0:30:87.25:0,87,987	0/0:28,0:28:84.21:0,84,940	0/0:20,0:20:57.15:0,57,636	0/0:18,0:18:48.14:0,48,544	0/0:29,0:29:81.22:0,81,909	1/1:0,29:29:87.29:1190,87,0	0/0:26,0:26:72.20:0,72,816	0/0:31,0:31:90.26:0,90,1021	0/0:8,0:8:24.07:0,24,272
chr10	73593588	.	TC	T	122.97	PASS	AB=0.810;AC=4;AF=0.071;AN=56;BaseQRankSum=6.286;DP=360;FS=0.000;HRun=3;HaplotypeScore=51.6647;InbreedingCoeff=0.4601;MQ=63.98;MQ0=3;MQRankSum=-1.204;QD=3.73;ReadPosRankSum=2.327;VQSLOD=0.1921;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:21.54:0,22,282	0/0:7,0:7:18.06:0,18,259	0/0:27,0:19:47.69:0,48,605	0/0:27,0:21:40.23:0,40,598	0/0:9,0:9:24.08:0,24,345	0/0:14,0:14:36.12:0,36,518	0/0:17,0:17:45.15:0,45,648	0/0:32,0:32:85.11:0,85,1155	0/0:15,0:15:42.14:0,42,604	0/1:5,1:6:0.15:27,0,0	0/1:11,5:16:26.19:90,0,26	0/0:9,0:9:20.80:0,21,259	0/0:5,0:5:6.02:0,6,86	0/0:11,0:11:30.10:0,30,432	0/0:16,0:16:45.15:0,45,647	0/0:14,0:14:33.11:0,33,472	0/0:9,0:9:0.29:0,0,238	0/0:10,0:10:15.02:0,15,194	0/0:11,0:11:27.06:0,27,351	0/0:12,0:12:33.10:0,33,457	0/0:31,0:29:81.26:0,81,1145	0/0:4,0:4:6.02:0,6,86	0/0:4,0:4:12.04:0,12,169	0/0:5,0:5:9.03:0,9,129	1/1:6,5:11:11.85:115,12,0	0/0:15,0:15:39.13:0,39,561	0/0:8,0:8:24.06:0,24,312	0/0:6,0:6:18.06:0,18,259
chr10	73593592	.	TCGC	T	581.33	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.942;DP=346;FS=1.515;HRun=0;HaplotypeScore=61.5945;InbreedingCoeff=0.8595;MQ=64.20;MQ0=3;MQRankSum=-0.757;QD=18.75;ReadPosRankSum=-0.512;VQSLOD=3.2481;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:18.48:0,18,216	0/0:6,0:6:18.05:0,18,379	0/0:24,0:16:29.94:0,30,855	0/0:27,0:23:30.66:0,31,1011	0/0:9,0:9:24.06:0,24,470	0/0:13,0:13:36.12:0,36,859	0/0:18,0:18:51.16:0,51,1142	0/0:29,0:29:76.07:0,76,1547	0/0:14,0:14:42.13:0,42,883	1/1:5,1:6:10.05:115,10,0	1/1:11,5:16:32.17:325,32,0	0/0:8,0:8:18.89:0,19,242	0/0:5,0:5:6.01:0,6,63	0/0:11,0:11:30.10:0,30,717	0/0:15,0:15:42.14:0,42,1008	0/0:13,0:13:36.12:0,36,859	0/0:8,0:8:16.38:0,16,396	0/0:9,0:9:15.05:0,15,337	0/0:11,0:11:27.09:0,27,551	0/0:11,0:11:29.71:0,30,706	0/0:32,0:30:84.29:0,84,1995	0/0:4,0:4:6.01:0,6,63	0/0:4,0:4:12.04:0,12,162	0/0:5,0:5:7.86:0,8,131	1/1:4,5:9:26.65:278,27,0	0/0:15,0:15:42.14:0,42,865	0/0:7,0:7:21.07:0,21,473	0/0:6,0:6:18.04:0,18,336
chr10	73593657	.	TGTGTTA	T	1470.48	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=5.541;DP=419;FS=13.546;HRun=0;HaplotypeScore=91.1941;InbreedingCoeff=0.4083;MQ=61.39;MQ0=8;MQRankSum=-1.510;QD=12.57;ReadPosRankSum=-0.364;VQSLOD=0.9083;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:24.50:177,0,24	0/0:5,0:5:12.04:0,12,340	0/0:23,0:10:30.10:0,30,563	0/0:31,0:17:30.50:0,30,482	0/0:15,0:15:45.14:0,45,1020	0/0:13,0:13:30.10:0,30,788	0/0:13,0:13:39.10:0,39,978	0/0:11,0:11:21.07:0,21,357	0/0:18,0:18:38.80:0,39,1032	1/1:3,16:19:48.15:827,48,0	1/1:5,7:12:3.01:66,3,0	0/1:12,0:11:34.24:83,0,34	1/1:6,0:6:3:27,3,0	0/0:10,0:10:30.10:0,30,752	0/0:18,0:18:41.85:0,42,1057	0/0:14,0:14:39.12:0,39,1055	0/1:14,0:14:9.47:9,0,901	0/0:20,0:20:27.09:0,27,662	0/0:18,0:18:36.12:0,36,750	0/0:14,0:14:36.12:0,36,901	0/0:31,0:29:66.22:0,66,1543	0/1:6,0:6:56.34:80,0,56	0/1:10,0:10:0.08:0,0,0	0/1:11,0:11:38.17:39,0,38	1/1:4,6:9:17.80:325,18,0	0/0:19,0:19:45.15:0,45,1241	0/0:19,0:19:36.12:0,36,850	0/0:10,0:10:30.10:0,30,656
chr10	73593661	.	TTA	T	1281.10	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=7.310;DP=412;FS=31.145;HRun=0;HaplotypeScore=66.0139;InbreedingCoeff=0.5970;MQ=69.44;MQ0=4;MQRankSum=-2.845;QD=11.34;ReadPosRankSum=-0.658;VQSLOD=1.5476;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,2:18:20.65:256,21,0	0/0:5,0:5:14.91:0,15,233	0/0:23,0:13:39.13:0,39,704	0/0:27,0:19:27.29:0,27,550	0/0:16,0:16:48.03:0,48,820	0/0:14,0:14:37.92:0,38,629	0/0:14,0:14:42.04:0,42,761	0/0:10,0:10:30.10:0,30,492	0/0:19,0:19:51.13:0,51,887	0/1:19,0:19:42.68:465,0,43	0/1:11,0:11:9.18:9,0,84	1/1:10,1:11:21.28:222,21,0	1/1:0,8:8:3:27,3,0	0/0:10,0:10:30.02:0,30,532	0/0:19,0:19:51.53:0,52,878	0/0:15,0:15:45.15:0,45,846	0/1:16,0:16:0.55:1,0,692	0/0:16,0:16:17.56:0,18,333	0/0:16,0:16:41.82:0,42,647	0/0:14,0:14:42.14:0,42,756	0/0:26,0:25:71.98:0,72,1094	1/1:6,0:7:13.70:189,14,0	0/0:1,7:9:0.26:0,0,0	1/1:10,1:12:14.12:187,14,0	0/1:10,0:9:26.87:97,0,27	0/0:19,0:19:46.71:0,47,873	0/0:17,0:17:45.01:0,45,712	0/0:10,0:10:30.08:0,30,501
chr10	73596463	.	T	TA	2034.50	PASS	AB=0.779;AC=18;AF=0.321;AN=56;BaseQRankSum=0.133;DP=476;FS=3.505;HRun=12;HaplotypeScore=80.7689;InbreedingCoeff=0.7075;MQ=76.30;MQ0=0;MQRankSum=-0.340;QD=11.97;ReadPosRankSum=-0.687;VQSLOD=3.4642;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:24:54.13:280,54,0	0/0:6,0:6:17.90:0,18,131	0/0:17,0:16:14:0,14,128	0/0:10,1:13:11.27:0,11,62	0/0:11,0:11:23.49:0,23,170	0/0:23,0:24:50.65:0,51,372	0/0:20,0:20:41.63:0,42,302	0/1:9,1:10:8.30:8,0,110	0/0:14,0:14:23.47:0,23,170	1/1:4,8:12:18.91:177,19,0	1/1:1,7:8:18.03:175,18,0	1/1:2,23:25:45.06:429,45,0	1/1:3,13:16:33.49:313,33,0	0/0:17,0:18:40.74:0,41,288	0/0:21,0:21:21.46:0,21,315	0/0:26,0:26:59.60:0,60,438	0/0:27,0:27:65.52:0,66,475	0/0:30,0:30:59.52:0,60,432	0/1:11,1:13:3.34:3,0,132	0/0:10,0:10:23.86:0,24,175	0/0:23,2:26:23.47:0,23,323	0/1:10,9:19:4.84:265,0,5	0/1:4,8:12:12.72:177,0,13	1/1:3,19:22:11.52:258,12,0	1/1:4,5:9:15.02:146,15,0	0/0:14,1:15:15.57:0,16,277	0/0:18,0:19:31.78:0,32,225	0/0:8,0:9:22.89:0,23,159
chr10	73596518	.	CGTGCGTGCGTGCGTGTGT	C	343.83	PASS	AB=0.846;AC=13;AF=0.241;AN=54;BaseQRankSum=4.322;DP=311;FS=3.410;HRun=0;HaplotypeScore=119.4826;InbreedingCoeff=0.3891;MQ=45.33;MQ0=27;MQRankSum=-2.327;QD=5.93;ReadPosRankSum=-0.734;VQSLOD=2.2575;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:12:2.89:0,3,63	0/0:3,0:3:9.03:0,9,346	1/1:2,0:2:2.84:14,3,0	./.	0/0:6,0:4:5.98:0,6,86	0/0:17,0:16:26.84:0,27,410	0/0:23,0:20:3.55:0,4,397	0/0:6,0:5:10.73:0,11,65	0/0:7,0:6:11.65:0,12,227	0/0:10,0:8:20.95:0,21,344	0/0:6,0:5:3.01:0,3,42	1/1:4,0:4:3.01:127,3,0	1/1:2,0:2:6.02:112,6,0	0/0:17,0:15:26.75:0,27,708	0/0:14,0:14:32.82:0,33,688	0/0:11,0:11:32.94:0,33,617	0/0:30,0:29:51.26:0,51,2093	0/1:3,18:21:7.27:70,0,7	0/0:15,0:9:14.70:0,15,135	0/1:4,0:4:2.64:3,0,40	0/0:36,0:28:21.34:0,21,349	1/1:10,0:10:2.15:24,2,0	1/1:4,0:4:6:75,6,0	0/0:13,0:11:0.35:0,0,1	0/0:9,0:8:16.42:0,16,199	0/1:11,0:10:59.61:60,0,203	0/0:10,0:8:3.21:0,3,97	0/0:2,0:1:2.97:0,3,20
chr10	73596526	.	CGTGCGT	C	1093.33	PASS	AB=1.000;AC=28;AF=0.560;AN=50;BaseQRankSum=0.070;DP=316;FS=1.514;HRun=0;HaplotypeScore=74.9009;InbreedingCoeff=-0.2331;MQ=44.10;MQ0=28;MQRankSum=1.399;QD=4.17;ReadPosRankSum=3.584;VQSLOD=1.2663;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:15:9.25:0,9,94	1/1:3,0:3:1.36:3,1,0	./.	./.	0/0:7,0:5:6.02:0,6,85	0/1:15,0:14:84.89:85,0,106	0/1:26,0:23:91.52:92,0,297	0/1:13,0:12:13.07:13,0,37	1/1:6,0:5:8.93:67,9,0	0/1:10,0:8:16.22:16,0,59	./.	0/1:7,0:5:15.47:36,0,15	1/1:3,0:3:5.31:37,5,0	0/1:15,0:14:90.90:91,0,106	0/1:13,0:13:63.84:114,0,64	0/1:7,0:7:58.76:59,0,102	0/1:30,0:29:99:186,0,510	0/1:22,0:22:12.51:13,0,13	1/1:11,0:7:2.91:28,3,0	1/1:4,0:4:2.69:33,3,0	0/1:37,0:28:98.74:145,0,99	0/0:12,0:11:0.47:0,0,1	1/1:4,0:4:2.92:17,3,0	1/1:14,0:10:5.56:61,6,0	0/0:8,0:7:5.92:0,6,39	0/1:10,0:9:67.80:68,0,84	1/1:4,8:10:2.66:70,3,0	0/0:2,0:1:0:0,0,0
chr10	73596530	.	CGT	C	208.65	PASS	AB=0.915;AC=18;AF=0.391;AN=46;BaseQRankSum=4.197;DP=327;FS=10.132;HRun=0;HaplotypeScore=69.5114;InbreedingCoeff=0.0028;MQ=43.48;MQ0=28;MQRankSum=0.886;QD=1.12;ReadPosRankSum=0.043;VQSLOD=0.5987;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:18:9.25:0,9,95	1/1:2,0:2:0.37:1,0,0	./.	./.	0/0:7,0:5:6.02:0,6,85	0/1:13,0:12:20.94:21,0,115	0/1:24,2:23:5.03:5,0,308	0/0:16,0:14:3.90:0,4,44	0/0:8,0:7:5.98:0,6,46	0/1:7,1:6:8.39:26,0,8	./.	0/1:5,3:6:12.65:29,0,13	1/1:4,0:4:2.60:31,3,0	0/0:14,0:13:9.50:0,10,128	0/1:13,0:14:4.85:5,0,73	0/1:6,0:6:21.84:22,0,102	0/1:27,4:30:44.73:45,0,557	0/0:23,0:23:3.92:0,4,21	./.	1/1:2,4:6:2.87:33,3,0	0/1:38,2:32:13.52:14,0,152	./.	0/0:3,1:4:0:0,0,0	1/1:9,7:11:8.65:83,9,0	0/0:7,1:7:2.94:0,3,18	0/0:10,0:9:5.75:0,6,84	1/1:12,0:10:2.71:23,3,0	0/0:1,1:1:0:0,0,0
chr10	73597207	.	C	CT	6853.03	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-14.232;DP=650;FS=5.525;HRun=5;HaplotypeScore=57.8473;InbreedingCoeff=0.9259;MQ=76.08;MQ0=0;MQRankSum=-0.317;QD=32.95;ReadPosRankSum=2.947;VQSLOD=5.4528;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:69.22:908,69,0	0/0:8,0:8:24.06:0,24,258	0/1:11,0:11:5.04:5,0,114	0/0:14,0:14:7.13:0,7,207	0/0:28,0:28:81.20:0,81,868	0/0:33,0:33:99:0,99,1064	0/0:17,0:17:48.12:0,48,515	0/0:29,0:29:66.16:0,66,710	0/0:23,0:23:60.13:0,60,637	1/1:2,18:20:51.17:670,51,0	1/1:1,26:27:75.24:987,75,0	1/1:1,24:25:66.21:868,66,0	1/1:0,25:25:66.21:868,66,0	0/0:16,0:16:45.11:0,45,484	0/0:20,0:20:57.14:0,57,612	0/0:30,0:30:84.19:0,84,894	0/0:34,0:34:99:0,99,1044	0/0:22,0:22:60.15:0,60,644	0/0:25,0:25:66.16:0,66,709	0/0:32,0:32:87.17:0,87,911	0/0:28,0:28:84.16:0,84,880	1/1:2,13:15:36.07:454,36,0	1/1:0,16:16:45.15:592,45,0	1/1:2,18:20:51.17:671,51,0	1/1:0,22:22:63.20:829,63,0	0/0:27,0:27:69.14:0,69,726	0/0:37,0:37:99:0,99,1051	0/0:19,0:19:54.14:0,54,580
chr10	73597794	.	AT	A	921.33	PASS	AB=0.763;AC=13;AF=0.232;AN=56;BaseQRankSum=6.627;DP=424;FS=1.143;HRun=12;HaplotypeScore=61.7874;InbreedingCoeff=0.7139;MQ=76.05;MQ0=3;MQRankSum=-0.185;QD=9.91;ReadPosRankSum=1.460;VQSLOD=2.9203;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,15:20:39.22:295,39,0	0/0:8,0:8:21.04:0,21,213	0/0:13,0:7:11.89:0,12,93	0/1:20,2:17:4.97:5,0,87	0/0:17,0:17:42.08:0,42,426	0/0:16,2:19:4.47:0,4,394	0/0:6,0:6:15.03:0,15,152	0/0:20,0:20:33.07:0,33,335	0/0:6,0:6:12.02:0,12,122	0/0:5,0:24:54.74:0,55,290	0/0:5,0:23:56.45:0,56,315	1/1:0,11:11:26.90:209,27,0	1/1:1,9:10:23.91:186,24,0	0/1:4,1:5:8.21:8,0,107	0/0:11,0:12:33.03:0,33,324	0/0:15,1:16:9.79:0,10,258	0/0:23,0:23:57.01:0,57,555	0/0:20,0:20:45.09:0,45,456	0/0:20,0:20:42.06:0,42,416	0/0:24,0:24:46.25:0,46,592	0/0:3,0:4:11.86:0,12,106	1/1:1,7:8:20.92:163,21,0	0/1:2,12:14:0.56:179,0,1	1/1:0,2:3:8.01:52,8,0	0/0:1,0:13:31.41:0,31,173	0/0:20,2:24:27.54:0,28,429	0/0:24,1:25:46.02:0,46,639	0/0:11,1:13:12.73:0,13,298
chr10	73598549	.	A	AT	2867.99	PASS	AB=0.817;AC=19;AF=0.339;AN=56;BaseQRankSum=-7.563;DP=553;FS=0.392;HRun=13;HaplotypeScore=60.6918;InbreedingCoeff=0.7858;MQ=71.07;MQ0=6;MQRankSum=0.137;QD=14.63;ReadPosRankSum=0.335;VQSLOD=4.3341;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:19:35.98:334,36,0	0/0:11,0:12:7.10:0,7,183	0/0:19,0:9:6.54:0,7,54	0/0:20,0:14:2.22:0,2,33	0/0:25,0:25:62.36:0,62,427	0/0:27,0:26:65.42:0,65,451	0/0:5,0:5:8.82:0,9,56	0/0:29,0:28:65.42:0,65,450	0/0:14,0:15:34.74:0,35,232	1/1:3,18:21:54.04:494,54,0	1/1:10,13:24:11.68:329,12,0	1/1:9,20:30:53.89:485,54,0	1/1:3,14:17:38.72:362,39,0	0/0:20,0:22:49.50:0,50,326	0/0:20,0:20:41.59:0,42,285	0/1:12,1:13:1.07:1,0,138	0/0:27,0:28:73.39:0,73,496	0/0:17,0:18:40.66:0,41,271	0/0:17,1:19:9.35:0,9,192	0/0:28,1:31:44.61:0,45,432	0/1:10,1:12:2.02:2,0,124	1/1:1,8:10:23.86:209,24,0	1/1:5,14:19:37.76:338,38,0	0/1:4,8:12:0.22:121,0,0	1/1:2,16:19:33.91:391,34,0	0/0:18,1:20:15.83:0,16,244	0/0:36,0:36:77.25:0,77,533	0/0:10,0:10:23.78:0,24,164
chr10	73599096	.	AT	A	1456.90	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.417;DP=620;FS=10.969;HRun=5;HaplotypeScore=78.0865;InbreedingCoeff=0.9950;MQ=80.81;MQ0=0;MQRankSum=-10.784;QD=22.07;ReadPosRankSum=0.993;VQSLOD=2.1298;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1395	0/0:7,0:7:21.07:0,21,287	0/0:17,0:17:33.11:0,33,444	0/0:27,0:26:60.09:0,60,769	0/0:30,0:30:75.24:0,75,1011	0/0:33,0:33:99:0,99,1354	0/0:16,0:16:48.16:0,48,657	0/0:28,0:28:72.22:0,72,957	0/0:23,0:23:63.19:0,63,831	1/1:10,19:29:64.91:674,65,0	1/1:1,12:13:27.07:287,27,0	0/0:13,0:13:39.12:0,39,518	0/0:19,0:19:51.16:0,51,682	0/0:24,0:24:69.23:0,69,942	0/0:19,0:19:54.18:0,54,738	0/0:27,0:27:81.27:0,81,1108	0/0:29,0:29:84.28:0,84,1149	0/0:11,0:11:33.07:0,33,430	0/0:21,0:21:63.21:0,63,862	0/0:20,0:20:54.16:0,54,708	0/0:27,0:27:75.25:0,75,1025	0/0:25,0:25:63.21:0,63,852	0/0:15,0:15:42.14:0,42,574	0/0:27,0:27:75.25:0,75,1026	1/1:3,21:24:60.14:639,60,0	0/0:17,1:18:17.89:0,18,624	0/0:29,0:29:87.29:0,87,1187	0/0:13,0:13:39.11:0,39,514
chr10	73599100	.	TTGTTCATC	T	2571.01	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.801;DP=628;FS=9.082;HRun=0;HaplotypeScore=166.0923;InbreedingCoeff=0.9270;MQ=80.17;MQ0=0;MQRankSum=-9.483;QD=42.15;ReadPosRankSum=1.008;VQSLOD=2.9137;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,4944	0/0:8,0:8:24.08:0,24,914	0/0:17,0:17:48.16:0,48,1928	0/0:27,0:26:54.81:0,55,2495	0/0:28,0:28:84.28:0,84,3561	0/0:35,0:35:99:0,105,4526	0/0:17,0:17:51.18:0,51,2343	0/0:30,0:30:81.27:0,81,3238	0/0:22,0:22:66.20:0,66,2745	1/1:19,7:26:75.20:1242,75,0	1/1:12,0:12:27.09:462,27,0	0/0:14,0:14:42.14:0,42,1914	0/0:17,0:17:51.17:0,51,2147	0/0:25,0:25:75.26:0,75,3187	0/0:19,0:19:57.20:0,57,2618	0/0:29,0:29:87.30:0,87,3967	0/0:34,0:34:99:0,102,4476	0/0:13,0:13:39.09:0,39,1612	0/0:23,0:23:69.24:0,69,2944	0/0:19,0:19:54.19:0,54,2489	0/0:26,0:26:78.27:0,78,3309	0/0:23,0:23:69.24:0,69,2938	0/0:15,0:15:45.15:0,45,2065	0/0:26,0:26:78.27:0,78,3505	1/1:23,0:23:60.18:1009,60,0	0/0:18,0:18:1.61:0,2,2259	0/0:32,0:32:96.33:0,96,4338	0/0:14,0:14:42.14:0,42,1882
chr10	73599103	.	TTCATC	T	3523.06	PASS	AB=0.947;AC=7;AF=0.125;AN=56;BaseQRankSum=11.735;DP=631;FS=9.370;HRun=0;HaplotypeScore=124.1719;InbreedingCoeff=0.8397;MQ=78.26;MQ0=0;MQRankSum=-10.074;QD=45.75;ReadPosRankSum=1.505;VQSLOD=3.7751;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,3758	0/0:7,0:7:21.06:0,21,624	0/0:18,0:18:54.19:0,54,1706	0/0:24,0:23:60.65:0,61,1804	0/0:27,0:27:78.27:0,78,2592	0/0:35,0:35:99:0,105,3328	0/0:17,0:17:51.18:0,51,1699	0/0:27,0:27:72.25:0,72,2360	0/0:21,0:21:63.22:0,63,2039	1/1:7,19:26:72.01:1532,72,0	1/1:0,11:11:27.09:610,27,0	0/0:14,0:14:42.14:0,42,1397	0/0:16,0:16:48.16:0,48,1598	0/0:24,0:24:72.23:0,72,2271	0/0:21,0:21:63.22:0,63,2085	0/0:30,0:30:90.31:0,90,2989	0/0:36,0:36:99:0,108,3499	0/0:13,0:13:39.13:0,39,1284	0/0:24,0:24:72.25:0,72,2285	0/0:23,0:23:66.23:0,66,2174	0/0:25,0:25:75.21:0,75,2340	0/0:23,0:23:66.23:0,66,2180	0/0:15,0:15:45.15:0,45,1499	0/0:28,0:28:84.29:0,84,2697	1/1:1,21:22:60.21:1367,60,0	0/1:17,1:18:14.95:15,0,1626	0/0:34,0:34:99:0,102,3347	0/0:14,0:14:42.14:0,42,1369
chr10	73599873	.	CT	C	3713.30	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.116;DP=589;FS=4.218;HRun=12;HaplotypeScore=74.6927;InbreedingCoeff=0.9535;MQ=70.33;MQ0=1;MQRankSum=3.402;QD=19.44;ReadPosRankSum=3.664;VQSLOD=4.5317;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:59.77:464,60,0	0/0:5,0:5:12.02:0,12,122	0/0:20,0:16:3.38:0,3,164	0/0:14,0:12:9.43:0,9,34	0/0:33,0:33:86.51:0,87,843	0/0:15,2:17:9.81:0,10,271	0/0:15,0:15:45.08:0,45,450	0/0:31,0:31:60.10:0,60,599	0/0:15,0:15:33.05:0,33,328	1/1:9,21:30:65.70:509,66,0	1/1:3,23:26:65.67:505,66,0	1/1:3,10:13:29.81:227,30,0	1/1:0,25:25:65.75:510,66,0	0/0:19,0:18:39.55:0,40,397	0/0:19,1:20:30.87:0,31,494	0/0:19,0:19:45.07:0,45,446	0/0:25,0:25:40.69:0,41,557	0/0:24,0:24:50.31:0,50,461	0/0:20,0:21:53.55:0,54,493	0/0:29,0:30:74.97:0,75,735	0/0:23,0:23:60.12:0,60,608	1/1:2,16:18:47.71:362,48,0	1/1:0,23:23:65.73:508,66,0	1/1:0,15:15:32.87:255,33,0	1/1:1,18:19:47.81:372,48,0	0/0:24,0:25:65.96:0,66,651	0/0:32,0:33:77.86:0,78,739	0/0:8,0:8:24.05:0,24,244
chr10	73600712	.	ATT	A	947	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=4.240;DP=436;FS=28.318;HRun=15;HaplotypeScore=60.4782;InbreedingCoeff=0.8639;MQ=59.14;MQ0=19;MQRankSum=0.089;QD=7.52;ReadPosRankSum=4.555;VQSLOD=-0.2563;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,17:24:29.69:308,30,0	0/0:4,0:4:11.99:0,12,142	0/0:24,0:8:14.32:0,14,127	0/1:15,0:6:0.74:1,0,38	0/0:25,0:30:57.38:0,57,534	0/0:8,0:9:23.47:0,23,221	0/0:18,0:18:39.07:0,39,484	0/0:34,0:36:73.99:0,74,808	0/0:9,0:10:20.49:0,20,216	1/1:11,1:15:13.74:72,14,0	1/1:6,0:14:27.41:117,27,0	1/1:3,3:5:11.99:105,12,0	1/1:3,3:6:10.51:103,11,0	0/0:16,0:17:29.81:0,30,317	0/0:13,0:14:35.43:0,35,379	0/0:13,0:15:29.43:0,29,295	0/0:18,0:18:32.44:0,32,325	0/0:13,0:13:30.02:0,30,358	0/0:25,0:29:71.78:0,72,763	0/0:13,0:13:29.93:0,30,342	0/0:10,0:8:12.04:0,12,150	1/1:2,4:5:2.85:70,3,0	1/1:6,2:9:5.58:80,6,0	1/1:4,9:14:23.58:196,24,0	1/1:4,1:13:21.92:94,22,0	0/0:18,0:21:46.53:0,47,484	0/0:16,0:17:41.30:0,41,398	0/0:5,0:3:5.99:0,6,62
chr10	73600730	.	TTC	T	131.73	PASS	AB=0.961;AC=14;AF=0.250;AN=56;BaseQRankSum=2.753;DP=487;FS=16.179;HRun=0;HaplotypeScore=69.9423;InbreedingCoeff=-0.2810;MQ=44.23;MQ0=25;MQRankSum=-3.286;QD=0.51;ReadPosRankSum=-1.459;VQSLOD=-0.5900;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:30:6.88:7,0,302	0/1:6,0:6:5.44:5,0,35	0/1:16,0:4:6.93:7,0,7	0/1:10,0:2:2.31:2,0,4	0/0:30,0:28:12.38:0,12,325	0/0:15,0:15:8.65:0,9,199	0/0:17,0:17:38.59:0,39,270	0/1:36,1:36:38.48:38,0,347	0/0:10,0:10:9.98:0,10,102	0/1:19,0:19:31.14:31,0,138	0/1:14,7:18:6.72:7,0,159	0/0:10,2:11:1.31:0,1,71	0/0:11,0:11:10.41:0,10,97	0/1:17,0:16:22.11:22,0,135	0/0:18,0:16:4.37:0,4,227	0/1:13,1:14:21.65:22,0,168	0/1:20,0:17:22.61:23,0,265	0/1:14,0:10:2.23:2,0,99	0/0:31,0:30:6.66:0,7,381	0/0:16,0:15:11.22:0,11,154	0/0:7,0:6:13.64:0,14,138	0/1:9,3:9:28.92:29,0,59	0/1:18,0:17:40.53:49,0,41	0/0:13,1:14:12.10:0,12,107	0/0:12,4:16:14.83:0,15,230	0/0:22,0:21:29.27:0,29,332	0/1:21,0:21:27.02:27,0,192	0/0:12,0:10:23.93:0,24,255
chr10	73602122	.	CT	C	248.32	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.134;DP=747;FS=1.199;HRun=4;HaplotypeScore=68.9176;InbreedingCoeff=0.9989;MQ=90.12;MQ0=0;MQRankSum=-3.432;QD=22.57;ReadPosRankSum=0.641;VQSLOD=2.7505;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,1525	0/0:10,0:10:30.10:0,30,420	0/0:28,0:28:75.25:0,75,1022	0/0:30,0:30:81.26:0,81,1087	0/0:28,0:28:75.25:0,75,1044	0/0:32,0:31:90.27:0,90,1238	0/0:15,0:15:45.15:0,45,629	0/0:20,0:20:54.18:0,54,757	0/0:27,0:27:78.26:0,78,1080	0/0:30,0:30:90.30:0,90,1259	0/0:25,0:25:75.19:0,75,996	0/0:40,0:40:99:0,120,1643	0/0:27,0:27:75.25:0,75,1050	0/0:19,0:19:57.18:0,57,783	0/0:31,0:31:87.28:0,87,1201	0/0:26,0:26:75.25:0,75,1051	0/0:32,0:32:96.30:0,96,1324	1/1:0,11:11:30.04:343,30,0	0/0:22,0:22:63.21:0,63,878	0/0:30,0:30:90.30:0,90,1259	0/0:30,0:30:87.27:0,87,1183	0/0:28,0:28:84.26:0,84,1141	0/0:31,0:31:93.30:0,93,1287	0/0:32,0:32:96.32:0,96,1344	0/0:19,0:19:51.17:0,51,714	0/0:31,0:31:90.28:0,90,1241	0/0:40,0:39:99:0,117,1587	0/0:13,0:13:39.13:0,39,544
chr10	73602313	.	C	CT	1389.73	PASS	AB=0.911;AC=8;AF=0.143;AN=56;BaseQRankSum=-6.767;DP=629;FS=2.300;HRun=10;HaplotypeScore=66.9529;InbreedingCoeff=0.6951;MQ=72.67;MQ0=0;MQRankSum=1.672;QD=12.87;ReadPosRankSum=0.505;VQSLOD=3.5689;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:22:48.98:0,49,381	0/1:11,1:13:12:12,0,109	0/0:11,0:11:13.26:0,13,138	0/0:11,0:13:23.94:0,24,196	0/0:36,0:36:83.88:0,84,689	0/0:22,1:23:18.94:0,19,362	0/0:15,0:17:37:0,37,280	0/0:30,0:30:65.73:0,66,527	0/0:13,0:13:26.18:0,26,204	1/1:8,25:37:18.57:731,19,0	1/1:3,18:21:48.06:498,48,0	0/0:22,0:22:50.90:0,51,415	0/0:19,0:19:50.91:0,51,419	0/0:17,0:17:47.93:0,48,391	0/0:16,1:19:8.99:0,9,266	0/0:26,0:26:71.90:0,72,591	0/0:30,0:30:68.90:0,69,567	0/0:15,0:18:42.53:0,43,331	0/0:23,0:23:59.88:0,60,486	0/0:33,0:33:71.83:0,72,588	0/0:16,0:16:35.94:0,36,295	0/0:17,0:17:38.94:0,39,320	0/0:29,0:29:62.88:0,63,517	0/1:22,3:25:13.14:13,0,312	1/1:2,10:12:27.07:288,27,0	0/0:33,1:34:48.86:0,49,605	0/0:32,3:35:16.87:0,17,548	0/0:18,0:18:47.94:0,48,394
chr10	73603200	.	A	AT	383.31	PASS	AB=0.875;AC=3;AF=0.054;AN=56;BaseQRankSum=-5.455;DP=619;FS=8.040;HRun=9;HaplotypeScore=57.5650;InbreedingCoeff=0.5382;MQ=66.12;MQ0=0;MQRankSum=-1.480;QD=11.98;ReadPosRankSum=-0.588;VQSLOD=2.3023;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:80.95:0,81,700	0/0:16,0:16:38.99:0,39,338	0/0:9,0:9:10.60:0,11,121	0/0:7,0:6:10.77:0,11,77	0/0:38,1:39:70.82:0,71,832	0/0:24,0:24:62.97:0,63,547	0/0:16,0:16:41.98:0,42,365	0/0:22,0:22:53.95:0,54,462	0/0:18,0:17:47.97:0,48,413	0/0:28,0:28:65.98:0,66,573	0/0:21,0:21:59.99:0,60,521	0/0:25,0:25:68.96:0,69,595	0/0:26,0:26:74.94:0,75,642	0/0:19,0:19:50.97:0,51,443	0/0:27,0:27:74.92:0,75,637	0/0:29,0:29:77.97:0,78,677	0/0:12,0:12:2.58:0,3,184	1/1:4,14:18:42.11:465,42,0	0/0:21,0:21:53.95:0,54,463	0/0:24,0:24:62.96:0,63,543	0/1:12,2:14:24.37:24,0,271	0/0:20,0:20:56.97:0,57,491	0/0:24,0:24:71.99:0,72,625	0/0:8,0:8:17.98:0,18,156	0/0:40,0:40:99:0,102,877	0/0:27,0:27:65.95:0,66,573	0/0:32,0:32:71.93:0,72,620	0/0:23,0:23:68.99:0,69,599
chr10	73603623	.	A	ACCCT	7020.58	PASS	AB=0.933;AC=19;AF=0.339;AN=56;BaseQRankSum=10.774;DP=370;FS=8.872;HRun=0;HaplotypeScore=62.2087;InbreedingCoeff=0.8688;MQ=69.50;MQ0=2;MQRankSum=-6.429;QD=61.58;ReadPosRankSum=0.430;VQSLOD=6.1020;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:25:60.21:1665,60,0	0/0:11,0:11:33.11:0,33,681	0/0:18,0:13:30.10:0,30,524	0/0:15,0:4:6.02:0,6,111	0/0:14,0:14:42.14:0,42,880	0/0:17,0:17:51.18:0,51,1070	0/0:14,0:14:42.14:0,42,881	0/0:21,0:21:60.18:0,60,1161	0/0:9,0:9:27.09:0,27,560	1/1:0,13:13:39.13:1071,39,0	1/1:0,5:7:18.06:493,18,0	1/1:1,16:18:45.07:1258,45,0	1/1:0,12:13:33.11:926,33,0	0/0:11,0:11:33.11:0,33,681	0/0:14,0:14:39.12:0,39,780	0/0:16,0:16:48.16:0,48,986	0/0:16,0:16:42.14:0,42,881	0/0:25,0:25:75.23:0,75,1531	0/0:11,0:11:33.11:0,33,692	0/0:10,0:10:30.09:0,30,543	0/0:11,0:11:33.11:0,33,692	1/1:0,1:1:3.01:83,3,0	1/1:0,9:9:21.07:563,21,0	1/1:0,4:5:12.04:335,12,0	1/1:0,7:8:21.07:587,21,0	0/1:13,1:14:40.54:41,0,725	0/0:16,0:16:48.16:0,48,1007	0/0:7,0:7:21.07:0,21,428
chr10	73604548	.	CCTTT	C	719.53	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=8.564;DP=370;FS=1.981;HRun=0;HaplotypeScore=68.2262;InbreedingCoeff=0.9161;MQ=65.68;MQ0=26;MQRankSum=0.150;QD=11.80;ReadPosRankSum=-0.435;VQSLOD=2.7072;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:9:17.74:120,18,0	0/0:3,0:3:9:0,9,81	0/0:39,0:15:25.70:0,26,238	0/0:41,0:20:13.92:0,14,189	0/0:9,0:9:19.73:0,20,150	0/0:18,0:18:9.67:0,10,285	0/0:17,0:12:35.84:0,36,296	0/0:23,0:19:54:0,54,491	0/0:12,0:12:32.82:0,33,288	1/1:0,5:6:17.20:130,17,0	1/1:0,5:5:8.77:51,9,0	1/1:7,0:7:20.55:145,21,0	1/1:3,0:3:5.79:37,6,0	0/0:7,0:6:14.90:0,15,119	0/0:14,0:14:41.59:0,42,328	0/0:9,0:8:22.92:0,23,180	0/0:18,0:18:46.65:0,47,328	0/0:13,0:13:34.63:0,35,235	0/0:14,0:14:36.66:0,37,309	0/0:8,0:7:20.87:0,21,161	0/0:38,0:35:99:0,102,1175	1/1:8,0:8:17.83:127,18,0	1/1:6,0:6:14.75:94,15,0	1/1:11,0:9:20.58:149,21,0	1/1:3,0:3:8.97:71,9,0	0/0:16,0:15:41.90:0,42,362	0/0:5,0:4:11.95:0,12,96	0/0:3,0:3:8.79:0,9,62
chr10	73605369	.	GGT	G	597.08	PASS	AB=0.895;AC=30;AF=0.577;AN=52;BaseQRankSum=5.501;DP=650;FS=0.000;HRun=0;HaplotypeScore=83.8989;InbreedingCoeff=0.1208;MQ=66.14;MQ0=18;MQRankSum=-1.660;QD=1.31;ReadPosRankSum=2.611;VQSLOD=1.3861;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,5:27:3.01:32,3,0	0/0:11,0:11:11.97:0,12,151	./.	./.	0/0:16,0:16:14.17:0,14,124	0/1:20,1:22:11.10:11,0,213	0/1:19,0:19:24.02:32,0,24	1/1:24,0:24:2.98:21,3,0	0/1:15,5:20:11.37:11,0,203	1/1:16,5:22:14.80:128,15,0	1/1:9,2:12:8.85:79,9,0	1/1:18,0:23:9.75:45,10,0	1/1:13,0:24:14.68:71,15,0	0/1:17,0:17:10.76:11,0,129	0/1:22,5:27:46.78:47,0,114	0/1:20,5:26:56.54:57,0,278	0/0:22,0:22:18.71:0,19,346	0/0:14,0:13:23.88:0,24,199	1/1:18,0:18:2.16:31,2,0	0/1:25,0:25:8.31:8,0,160	0/1:57,2:59:45.41:45,0,349	1/1:12,0:13:2.84:14,3,0	1/1:10,0:11:2.84:14,3,0	0/1:20,0:28:0:0,0,0	1/1:17,2:23:8.85:79,9,0	0/0:20,0:20:8.55:0,9,96	0/1:13,3:16:25.92:26,0,38	0/0:11,0:10:12.04:0,12,173
chr10	73606609	.	C	CT	923.77	PASS	AB=0.895;AC=12;AF=0.231;AN=52;BaseQRankSum=1.278;DP=433;FS=7.597;HRun=8;HaplotypeScore=65.3004;InbreedingCoeff=0.7503;MQ=36.83;MQ0=58;MQRankSum=-5.082;QD=9.72;ReadPosRankSum=0.696;VQSLOD=1.3970;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:12:15.04:173,15,0	0/0:6,0:3:6:0,6,55	./.	./.	0/1:21,1:20:1.73:2,0,240	0/0:17,0:17:29.89:0,30,274	0/0:16,0:12:17.99:0,18,164	0/0:19,0:19:32.82:0,33,276	0/0:18,0:15:7.87:0,8,126	0/0:17,0:13:20.98:0,21,191	0/0:17,0:15:27.01:0,27,246	1/1:3,7:9:21.06:237,21,0	1/1:4,7:9:21.06:242,21,0	0/0:12,0:10:8.42:0,8,82	0/0:18,0:18:32.99:0,33,301	0/0:17,0:15:16.99:0,17,163	0/0:37,0:25:50.46:0,50,462	0/0:12,1:9:14.04:0,14,116	0/0:21,0:20:35.97:0,36,317	0/0:19,0:17:23.51:0,24,211	0/0:7,0:7:12:0,12,109	1/1:1,8:8:18.05:208,18,0	1/1:5,6:10:15.04:172,15,0	0/1:12,3:8:18.42:60,0,18	0/0:12,0:10:18:0,18,164	0/0:25,0:23:51.02:0,51,466	0/0:16,0:14:23.59:0,24,214	0/0:16,0:14:17.78:0,18,140
chr10	73607912	.	GC	G	801.10	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.790;DP=766;FS=6.659;HRun=2;HaplotypeScore=86.3194;InbreedingCoeff=0.9842;MQ=70.25;MQ0=2;MQRankSum=-0.316;QD=29.67;ReadPosRankSum=2.901;VQSLOD=2.9906;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,1380	0/0:12,0:12:36.12:0,36,539	0/0:23,0:20:40.47:0,40,636	0/0:18,1:19:51.06:0,51,723	0/0:26,0:26:75.18:0,75,1006	0/0:23,0:23:69.21:0,69,996	0/0:31,0:31:93.30:0,93,1371	0/0:29,0:29:81.14:0,81,1136	0/0:34,0:34:99:0,102,1504	0/0:25,0:25:72.23:0,72,1041	0/0:14,0:14:35.85:0,36,496	0/0:27,0:27:78.24:0,78,1114	0/0:25,0:25:72.23:0,72,1058	0/0:38,0:38:99:0,114,1666	0/0:49,0:49:99:0,147,2142	0/0:42,0:42:99:0,126,1850	0/0:21,0:21:63.20:0,63,924	1/1:0,27:27:69.22:896,69,0	0/0:20,0:20:60.17:0,60,837	0/0:26,0:26:75.18:0,75,988	0/0:45,0:45:99:0,132,1877	0/0:28,0:28:78.20:0,78,1055	0/0:23,0:23:63.14:0,63,808	0/0:38,0:38:99:0,114,1666	0/0:16,0:16:48.14:0,48,682	0/0:27,0:27:78.23:0,78,1098	0/0:36,0:36:99:0,102,1528	0/0:5,0:5:15.05:0,15,225
chr10	73608683	.	A	ACC	9262.50	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-14.924;DP=952;FS=7.156;HRun=1;HaplotypeScore=110.6194;InbreedingCoeff=0.9999;MQ=62.49;MQ0=3;MQRankSum=-1.231;QD=42.88;ReadPosRankSum=3.863;VQSLOD=4.8126;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,47:48:99:2098,111,0	0/0:20,0:20:60.09:0,60,801	0/0:39,0:33:90.08:0,90,1127	0/0:44,0:35:85.65:0,86,1232	0/0:33,0:33:96.27:0,96,1380	0/0:27,0:27:78.19:0,78,1086	0/0:34,0:34:96.19:0,96,1290	0/0:41,0:41:99:0,114,1649	0/0:27,0:27:81.17:0,81,1125	0/0:32,0:32:90.25:0,90,1283	0/0:19,0:19:51.14:0,51,736	1/1:0,29:29:75.26:1446,75,0	1/1:5,40:45:99:1856,102,0	0/0:36,0:36:99:0,105,1413	0/0:50,0:50:99:0,147,2053	0/0:38,0:38:99:0,114,1637	0/0:36,0:36:99:0,105,1495	0/0:21,0:21:60.09:0,60,803	0/0:20,0:20:51.14:0,51,737	0/0:24,0:24:72.13:0,72,913	0/0:74,0:74:99:0,220,3081	1/1:1,31:33:81.28:1561,81,0	1/1:1,22:23:39.27:912,39,0	1/1:1,36:37:72.25:1389,72,0	0/0:33,0:33:96.22:0,96,1319	0/0:34,0:34:99:0,102,1447	0/0:41,0:41:99:0,119,1699	0/0:12,0:12:33.50:0,34,397
chr10	73609517	.	AAGCCTCT	A	43	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.971;DP=642;FS=2.136;HRun=0;HaplotypeScore=142.8380;InbreedingCoeff=0.9379;MQ=81.86;MQ0=0;MQRankSum=-2.955;QD=2.69;ReadPosRankSum=0.173;VQSLOD=2.7541;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.16:0,48,1727	0/0:12,0:12:33.11:0,33,1333	0/0:21,0:21:60.19:0,60,2148	0/0:16,0:16:29.84:0,30,972	0/0:25,0:25:66.23:0,66,2512	0/0:20,0:20:60.21:0,60,2423	0/0:22,0:22:66.23:0,66,2639	0/0:34,0:34:87.29:0,87,3220	0/0:20,0:20:57.20:0,57,2162	0/0:28,0:28:84.29:0,84,3299	0/0:28,0:28:78.27:0,78,3073	0/0:27,0:27:75.26:0,75,2971	0/0:35,0:35:99:0,105,4142	0/0:19,0:19:57.20:0,57,2300	0/0:32,0:32:93.32:0,93,3677	0/0:30,0:30:90.31:0,90,3555	0/0:22,0:22:63.22:0,63,2463	1/1:11,5:16:9.01:126,9,0	0/0:13,0:13:36.12:0,36,1244	0/0:22,0:22:63.22:0,63,2306	0/0:21,0:21:60.21:0,60,2344	0/0:18,0:18:54.19:0,54,2181	0/0:17,0:17:51.18:0,51,2050	0/0:19,0:19:57.20:0,57,2293	0/0:34,0:34:99:0,99,3818	0/0:29,0:29:84.28:0,84,3265	0/0:28,0:28:69.22:0,69,2654	0/0:17,0:17:51.18:0,51,2059
chr10	73609886	.	TCAAA	T	2213.67	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.477;DP=645;FS=10.119;HRun=0;HaplotypeScore=127.8438;InbreedingCoeff=0.9951;MQ=66.36;MQ0=0;MQRankSum=2.584;QD=26.35;ReadPosRankSum=2.309;VQSLOD=3.2816;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:31:40.28:0,40,572	0/0:20,0:20:45.14:0,45,1025	0/0:19,0:16:18.81:0,19,358	0/0:26,0:25:30.10:0,30,651	0/0:34,0:34:96.32:0,96,2146	0/0:26,0:26:66.23:0,66,1551	0/0:20,0:20:42.12:0,42,944	0/0:19,0:19:36.12:0,36,860	0/0:16,0:16:30.10:0,30,724	1/1:6,14:20:42.14:679,42,0	1/1:13,17:30:54.18:866,54,0	0/0:14,0:20:42.04:0,42,547	0/0:14,0:17:42.01:0,42,526	0/0:23,0:23:57.20:0,57,1361	0/0:19,0:19:42.14:0,42,1017	0/0:23,0:23:42.14:0,42,1022	0/0:38,0:37:87.23:0,87,1922	0/0:21,0:21:39.06:0,39,827	0/0:16,0:15:27.09:0,27,657	0/0:25,0:25:48.16:0,48,1144	0/0:20,0:20:54.19:0,54,1314	0/0:14,0:25:57.14:0,57,820	0/0:24,0:33:52.84:0,53,692	0/0:11,0:14:21.03:0,21,254	1/1:12,21:34:51.17:811,51,0	0/0:15,0:15:39.13:0,39,925	0/0:24,0:24:66.20:0,66,1507	0/0:17,0:17:33.11:0,33,776
chr10	73610297	.	T	TC	6492.72	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=16.608;DP=590;FS=0.340;HRun=0;HaplotypeScore=78.7226;InbreedingCoeff=0.9991;MQ=61.15;MQ0=1;MQRankSum=-0.003;QD=37.75;ReadPosRankSum=4.215;VQSLOD=5.1332;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:81.27:1139,81,0	0/0:9,0:9:27.09:0,27,378	0/0:21,0:19:21.38:0,21,616	0/0:25,0:24:68.70:0,69,904	0/0:19,0:19:57.19:0,57,797	0/0:13,0:13:39.11:0,39,527	0/0:19,0:19:57.19:0,57,797	0/0:28,0:28:84.23:0,84,1139	0/0:19,0:19:54.18:0,54,755	1/1:1,23:24:69.08:971,69,0	1/1:0,10:10:30.06:401,30,0	1/1:0,20:20:60.20:834,60,0	1/1:0,23:23:57.19:780,57,0	0/0:25,0:25:69.20:0,69,944	0/0:27,0:27:78.25:0,78,1073	0/0:25,0:25:66.22:0,66,922	0/0:34,0:34:99:0,99,1384	0/0:23,0:23:66.22:0,66,923	0/0:28,0:28:81.24:0,81,1113	0/0:23,0:23:69.22:0,69,947	0/0:26,0:26:78.24:0,78,1071	1/1:0,12:12:33.11:459,33,0	1/1:0,11:11:33.11:470,33,0	1/1:2,22:24:55.67:801,56,0	1/1:0,15:15:45.15:637,45,0	0/0:15,0:15:39.13:0,39,546	0/0:18,0:18:51.17:0,51,711	0/0:21,0:21:63.21:0,63,881
chr10	73613044	.	T	TA	1097.65	PASS	AB=0.885;AC=17;AF=0.304;AN=56;BaseQRankSum=2.542;DP=452;FS=5.486;HRun=9;HaplotypeScore=60.0204;InbreedingCoeff=0.6833;MQ=69.25;MQ0=6;MQRankSum=0.235;QD=7.95;ReadPosRankSum=-2.665;VQSLOD=0.9287;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:51.75:378,52,0	0/0:4,0:4:5.98:0,6,48	0/0:39,0:19:27.96:0,28,236	0/0:22,0:9:5.15:0,5,62	0/0:22,0:21:50.78:0,51,414	0/0:13,0:13:35.94:0,36,301	0/0:20,0:20:49.13:0,49,404	0/0:18,0:18:22.86:0,23,202	0/0:9,0:9:19.44:0,19,145	1/1:8,12:20:18.72:314,19,0	0/1:6,2:10:6.50:111,0,7	1/1:9,0:9:5.94:41,6,0	1/1:4,0:4:4.21:23,4,0	0/0:9,0:9:23.87:0,24,197	0/0:14,0:13:35.97:0,36,306	0/0:14,0:14:35.20:0,35,290	0/0:30,0:30:54.57:0,55,446	0/0:23,0:23:56.73:0,57,466	0/0:18,0:17:44.95:0,45,378	0/1:15,1:16:6.29:6,0,170	0/0:14,0:14:32.95:0,33,279	1/1:9,0:9:8.97:69,9,0	1/1:9,0:9:3.45:24,3,0	0/1:18,0:18:2.02:114,0,2	1/1:1,12:13:18.05:199,18,0	0/0:14,0:14:9.30:0,9,211	0/0:23,0:22:59.95:0,60,515	0/0:8,0:8:17.10:0,17,150
chr10	73613053	.	A	AAG	1612.27	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=3.058;DP=446;FS=7.393;HRun=0;HaplotypeScore=66.6932;InbreedingCoeff=0.5893;MQ=61.54;MQ0=7;MQRankSum=0.299;QD=13.78;ReadPosRankSum=-2.798;VQSLOD=1.9793;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,8:29:68.94:828,69,0	0/0:3,0:4:8.95:0,9,84	0/0:35,0:15:27.74:0,28,322	0/0:19,0:6:5.19:0,5,83	0/0:23,0:22:48.80:0,49,627	0/0:15,0:15:44.92:0,45,514	0/0:23,0:23:48.85:0,49,674	0/0:14,0:17:14.28:0,14,325	0/0:9,0:9:22.54:0,23,235	0/1:15,0:15:18.79:101,0,19	0/1:10,0:10:55.26:62,0,55	1/1:0,7:7:5.97:74,6,0	1/1:2,1:4:9.01:111,9,0	0/0:10,0:10:27.04:0,27,341	0/0:14,0:13:36.08:0,36,486	0/0:15,0:15:30.76:0,31,460	0/0:26,0:26:63.01:0,63,775	0/0:24,0:24:37.52:0,38,703	0/0:20,0:19:41.07:0,41,569	0/0:16,0:16:23.77:0,24,329	0/0:14,0:14:35.99:0,36,444	1/1:1,9:10:9.03:166,9,0	1/1:4,5:10:8.86:96,9,0	1/1:1,13:16:1.06:326,1,0	0/1:15,0:15:21.21:21,0,30	0/0:13,0:13:12.58:0,13,351	0/0:22,0:21:49.28:0,49,829	0/0:10,0:10:26.09:0,26,295
chr10	73613147	.	GA	G	1420.84	PASS	AB=0.787;AC=22;AF=0.393;AN=56;BaseQRankSum=3.661;DP=526;FS=13.631;HRun=13;HaplotypeScore=65.9077;InbreedingCoeff=0.1999;MQ=76.38;MQ0=3;MQRankSum=-0.022;QD=5.17;ReadPosRankSum=2.315;VQSLOD=0.7879;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,15:25:21.85:126,0,22	0/1:4,1:5:6.89:7,0,97	0/1:47,0:25:7.69:8,0,105	0/0:38,0:18:24.59:0,25,166	0/0:21,1:23:34.87:0,35,446	0/0:14,1:14:11.11:0,11,260	0/1:14,1:15:4.81:5,0,252	0/0:19,3:22:1.24:0,1,331	0/1:12,2:14:13.73:14,0,199	1/1:4,8:12:26.81:194,27,0	1/1:3,13:18:30.87:208,31,0	1/1:4,8:12:20.86:153,21,0	0/1:3,8:11:8.30:109,0,8	0/0:16,0:16:17.12:0,17,305	0/0:20,2:22:23.09:0,23,368	0/0:16,0:16:39.04:0,39,370	0/0:30,0:32:65.23:0,65,653	0/0:25,0:24:12.38:0,12,419	0/1:14,4:19:42.54:43,0,287	0/1:9,1:11:5.09:5,0,78	0/0:19,0:19:41.98:0,42,382	0/1:3,8:11:5.33:129,0,5	0/1:2,9:11:2.33:148,0,2	1/1:2,10:12:20.87:153,21,0	1/1:5,16:21:36.17:280,36,0	0/1:15,3:19:14.81:15,0,334	0/0:21,0:23:53.75:0,54,490	0/1:10,2:12:3.89:4,0,122
chr10	73618515	.	T	TAGC	724.38	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=7.638;DP=503;FS=3.271;HRun=0;HaplotypeScore=88.0324;InbreedingCoeff=0.8668;MQ=75.00;MQ0=0;MQRankSum=-4.524;QD=10.06;ReadPosRankSum=0.662;VQSLOD=2.9847;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:7:18.05:0,18,256	0/0:23,0:22:32.71:0,33,460	0/0:19,0:14:4.71:0,5,202	0/0:10,0:10:21:0,21,216	0/0:10,0:10:17.97:0,18,168	0/0:28,0:28:81.16:0,81,1110	0/0:18,0:18:38.95:0,39,390	0/0:25,0:25:63.17:0,63,929	0/0:16,0:16:30.06:0,30,357	0/0:3,0:3:3:0,3,25	1/1:5,17:22:18.01:251,18,0	1/1:6,13:19:20.92:311,21,0	0/0:27,0:27:66.11:0,66,947	0/0:32,0:32:84.21:0,84,1196	0/0:21,0:21:51.12:0,51,713	0/0:37,0:37:99:0,99,1482	0/0:6,0:6:17.99:0,18,211	0/0:15,0:15:30:0,30,302	0/0:12,0:12:24.01:0,24,289	0/0:46,0:46:99:0,111,1334	1/1:15,0:15:5.84:52,6,0	./.	1/1:15,1:16:21.03:259,21,0	0/0:11,0:11:12.01:0,12,141	0/0:23,0:23:54.08:0,54,648	0/0:17,0:17:51.11:0,51,731	0/0:13,0:13:39.11:0,39,592
chr10	73618532	.	GCTGCTTCTGCTT	G	514.79	PASS	AB=1.000;AC=6;AF=0.111;AN=54;BaseQRankSum=6.503;DP=468;FS=0.000;HRun=0;HaplotypeScore=145.7304;InbreedingCoeff=0.2958;MQ=61.98;MQ0=7;MQRankSum=-5.369;QD=10.09;ReadPosRankSum=2.218;VQSLOD=2.4331;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:5:0.10:0,0,0	0/0:9,0:9:27.09:0,27,1009	0/0:30,0:16:38.92:0,39,1034	0/0:22,0:11:3.72:0,4,740	0/0:14,0:13:20.85:0,21,743	0/0:11,0:11:23.75:0,24,859	0/0:26,0:26:75.15:0,75,2562	0/0:19,0:15:21.07:0,21,649	0/0:20,0:20:60.19:0,60,2445	0/0:9,0:9:18.04:0,18,451	0/0:8,0:8:11.98:0,12,173	1/1:15,0:15:6.55:230,7,0	0/1:12,0:12:19.02:177,0,19	0/0:24,0:24:60.21:0,60,2415	0/0:34,0:34:93.22:0,93,3569	0/0:16,0:16:42.07:0,42,1252	0/0:33,0:33:93.23:0,93,3991	0/1:4,0:4:15.89:16,0,18	0/0:16,0:16:36.04:0,36,926	0/0:13,0:13:35.70:0,36,840	0/0:30,0:30:78.69:0,79,2513	0/0:6,7:13:6.56:0,7,38	./.	0/1:11,0:11:8.46:205,0,8	0/0:11,0:11:4.88:0,5,353	0/0:21,0:21:39.08:0,39,1159	0/0:19,0:19:57.20:0,57,3004	0/0:15,0:15:45.15:0,45,1990
chr10	73618535	.	GCTT	G	223.59	PASS	AB=0.933;AC=7;AF=0.130;AN=54;BaseQRankSum=6.815;DP=458;FS=2.635;HRun=0;HaplotypeScore=74.8050;InbreedingCoeff=0.5960;MQ=59.26;MQ0=10;MQRankSum=-5.412;QD=3.85;ReadPosRankSum=1.829;VQSLOD=1.5989;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:5:0:0,0,0	0/0:10,0:10:30:0,30,485	0/0:33,0:16:41.30:0,41,706	0/0:23,0:10:11.13:0,11,360	0/0:14,0:13:20.96:0,21,266	0/0:10,0:10:20.77:0,21,300	0/0:26,0:26:75.14:0,75,1380	0/0:18,0:14:24.05:0,24,356	0/0:21,0:21:63.11:0,63,1213	0/0:7,0:7:17.99:0,18,275	0/0:9,0:9:11.94:0,12,115	0/1:12,2:14:2.43:101,0,2	1/1:11,1:12:0.16:85,0,0	0/0:23,0:23:63.14:0,63,1267	0/0:32,0:32:93.09:0,93,1625	0/0:15,0:15:39.11:0,39,773	0/0:34,0:34:96.20:0,96,1883	0/0:3,0:3:8.97:0,9,89	0/0:13,0:13:35.81:0,36,436	0/0:13,0:13:38.37:0,38,454	0/0:29,0:29:78.07:0,78,1374	0/1:11,1:12:0.75:1,0,10	./.	1/1:7,4:11:10.05:145,10,0	0/0:11,0:11:15.80:0,16,217	0/0:17,0:17:39.08:0,39,640	0/0:20,0:20:60.12:0,60,1221	0/0:15,0:15:45.14:0,45,946
chr10	73618550	.	GCTT	G	324.25	PASS	AB=0.956;AC=9;AF=0.161;AN=56;BaseQRankSum=2.825;DP=437;FS=0.000;HRun=0;HaplotypeScore=71.7203;InbreedingCoeff=0.4420;MQ=50.26;MQ0=13;MQRankSum=0.460;QD=3.73;ReadPosRankSum=-0.673;VQSLOD=1.3596;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:7:6.58:0,7,30	0/0:10,0:10:24.07:0,24,438	0/0:36,0:7:9.03:0,9,144	0/0:25,0:9:15.03:0,15,232	0/0:11,0:10:12.93:0,13,246	0/0:10,0:10:24.02:0,24,376	0/0:24,0:24:54.09:0,54,948	0/1:18,0:14:12.22:12,0,430	0/0:19,0:19:45.09:0,45,797	1/1:3,5:8:14.01:143,14,0	1/1:1,8:9:9.03:115,9,0	0/0:11,0:11:5.97:0,6,50	0/0:11,0:11:17.43:0,17,109	0/0:18,0:18:33.11:0,33,632	0/1:27,2:29:19.74:20,0,1051	0/0:12,0:12:11.99:0,12,196	0/0:27,0:27:57.15:0,57,1089	0/0:3,0:3:2.95:0,3,21	0/0:12,0:12:12.04:0,12,243	0/0:18,0:17:29.61:0,30,420	0/0:25,0:25:48.15:0,48,882	0/0:13,0:13:10.41:0,10,48	0/0:4,0:2:2.97:0,3,20	0/0:10,0:10:9.75:0,10,55	1/1:2,7:9:11.70:165,12,0	0/1:13,1:14:15.86:16,0,412	0/0:21,0:21:54.11:0,54,970	0/0:19,0:19:36.12:0,36,689
chr10	73618619	.	TCCA	T	67.49	PASS	AB=1.000;AC=15;AF=0.288;AN=52;BaseQRankSum=-2.298;DP=155;FS=3.188;HRun=0;HaplotypeScore=38.6429;InbreedingCoeff=0.2202;MQ=38.28;MQ0=15;MQRankSum=0.760;QD=1.69;ReadPosRankSum=-2.491;VQSLOD=0.7696;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:6:3.75:0,4,17	0/0:3,0:2:3.01:0,3,34	0/0:14,0:1:3.01:0,3,56	0/0:6,0:2:2.88:0,3,20	0/0:5,0:5:0.85:0,1,2	0/1:6,0:6:2.84:3,0,63	1/1:4,0:3:5.95:44,6,0	0/0:12,0:10:7.22:0,7,108	0/0:7,0:7:14.22:0,14,139	0/0:3,0:3:2.03:0,2,6	./.	1/1:2,0:2:2.97:20,3,0	0/0:2,0:2:2.37:0,2,8	1/1:1,3:4:3.01:38,3,0	0/0:9,0:9:3.58:0,4,129	0/0:5,0:5:3.01:0,3,40	1/1:7,0:7:5.95:42,6,0	0/1:2,0:2:12.65:13,0,23	0/1:2,0:2:0:0,0,0	0/0:13,0:10:15.05:0,15,193	0/0:6,0:5:6.02:0,6,76	1/1:1,0:1:2.68:11,3,0	0/0:4,0:4:2.35:0,2,10	0/0:8,1:8:1.21:0,1,3	./.	0/1:5,0:4:15.94:16,0,91	0/1:7,0:6:10.99:11,0,87	0/0:6,0:6:15.05:0,15,188
chr10	73618727	.	CTCT	C	1857.52	PASS	AB=0.970;AC=17;AF=0.304;AN=56;BaseQRankSum=8.985;DP=321;FS=5.235;HRun=0;HaplotypeScore=72.8999;InbreedingCoeff=0.6923;MQ=48.04;MQ0=20;MQRankSum=-7.169;QD=16.44;ReadPosRankSum=0.661;VQSLOD=2.8887;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,2:5:8.93:87,9,0	0/0:6,0:6:15.05:0,15,302	0/0:17,0:5:15.01:0,15,241	0/0:19,0:10:20.74:0,21,360	0/0:9,0:9:20.97:0,21,241	0/0:10,0:10:27.07:0,27,464	0/0:14,0:12:32.89:0,33,540	0/0:17,0:13:33.05:0,33,504	0/0:9,0:9:26.97:0,27,394	0/1:9,1:9:33.82:34,0,130	1/1:14,0:14:7.03:59,7,0	1/1:2,7:9:27.04:380,27,0	1/1:3,8:11:32.99:428,33,0	0/0:8,0:7:12.01:0,12,198	0/0:9,0:9:26.92:0,27,379	0/0:11,0:11:33.09:0,33,625	0/0:12,0:10:11.97:0,12,440	0/0:7,0:7:18:0,18,192	0/0:11,0:3:8.82:0,9,103	0/0:14,0:14:23.27:0,23,567	0/1:16,0:15:8.95:9,0,244	1/1:2,9:11:33.04:448,33,0	1/1:5,11:15:35.61:393,36,0	1/1:3,4:6:11.88:131,12,0	0/1:13,0:13:31.44:84,0,31	0/0:25,0:23:69.11:0,69,1273	0/0:5,0:5:15.01:0,15,253	0/0:5,0:5:14.08:0,14,200
chr10	73618730	.	TTCCTCCTTC	T	1457.42	PASS	AB=0.935;AC=10;AF=0.179;AN=56;BaseQRankSum=5.380;DP=334;FS=3.941;HRun=0;HaplotypeScore=105.7987;InbreedingCoeff=-0.0122;MQ=50.26;MQ0=19;MQRankSum=-6.785;QD=14.87;ReadPosRankSum=-3.696;VQSLOD=1.3867;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:5:28.05:29,0,28	0/0:6,0:6:15.05:0,15,582	0/0:18,0:6:18.06:0,18,525	0/0:19,0:10:22.64:0,23,833	0/0:10,0:10:21.07:0,21,585	0/0:12,0:12:33.11:0,33,1099	0/0:13,0:11:33.08:0,33,1128	0/0:18,0:14:32.58:0,33,1166	0/0:10,0:10:24.08:0,24,870	0/1:10,1:10:99:151,0,299	1/1:3,11:14:18.06:371,18,0	0/1:9,0:9:17.88:18,0,225	0/1:11,0:11:99:153,0,163	0/0:8,0:7:12.04:0,12,405	0/0:11,0:11:30.03:0,30,893	0/0:12,0:12:36.12:0,36,1384	0/0:13,0:12:33.09:0,33,1101	0/0:8,0:8:18.38:0,18,250	0/0:10,0:3:5.94:0,6,165	0/0:14,0:14:19.04:0,19,1073	0/0:16,0:15:2.48:0,2,533	0/1:11,0:11:99:183,0,112	0/1:16,0:15:53.87:283,0,54	0/1:8,0:7:25.13:25,0,65	0/1:3,10:13:48.80:394,0,49	0/0:26,0:24:72.25:0,72,2768	0/0:5,0:5:15.05:0,15,588	0/0:5,0:5:10.83:0,11,338
chr10	73618739	.	C	CCTCT	508.99	PASS	AB=0.750;AC=5;AF=0.089;AN=56;BaseQRankSum=3.719;DP=373;FS=7.514;HRun=0;HaplotypeScore=98.7108;InbreedingCoeff=0.6856;MQ=53.74;MQ0=15;MQRankSum=-3.510;QD=13.05;ReadPosRankSum=0.518;VQSLOD=2.5145;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:10.85:0,11,104	0/0:7,0:7:18.06:0,18,370	0/0:22,0:10:26.88:0,27,509	0/0:22,0:11:28.99:0,29,490	0/0:9,0:9:20.86:0,21,385	0/0:13,0:13:39.11:0,39,771	0/0:16,0:14:42.14:0,42,765	0/0:19,0:16:48.13:0,48,906	0/0:11,0:11:27.09:0,27,552	0/1:8,4:11:53.82:306,0,54	1/1:11,3:14:7.21:98,7,0	0/0:11,0:11:25.93:0,26,276	0/0:11,0:11:32.92:0,33,321	0/0:9,0:9:21.04:0,21,333	0/0:13,0:13:36.12:0,36,721	0/0:12,0:12:36.12:0,36,739	0/0:15,0:13:36.12:0,36,696	0/0:10,0:10:20.54:0,21,367	0/0:10,0:8:21.07:0,21,359	0/0:13,0:13:36.07:0,36,670	0/0:15,0:13:25.02:0,25,416	0/0:13,0:13:35.24:0,35,296	0/0:18,0:17:36.43:0,36,306	0/0:12,0:11:14.13:0,14,125	1/1:10,3:13:13.33:223,13,0	0/0:29,0:28:81.27:0,81,1609	0/0:10,0:10:27.07:0,27,475	0/0:4,0:4:11.99:0,12,207
chr10	73618768	.	A	AT	2427.63	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=8.836;DP=473;FS=3.577;HRun=10;HaplotypeScore=92.8639;InbreedingCoeff=0.6960;MQ=54.40;MQ0=4;MQRankSum=-6.058;QD=15.36;ReadPosRankSum=1.778;VQSLOD=4.1167;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:19:47.79:445,48,0	0/0:11,1:12:29.95:0,30,244	0/1:9,0:7:6.02:6,0,40	0/0:13,0:8:10.47:0,10,57	0/0:15,0:15:26.96:0,27,222	0/0:16,0:16:44.94:0,45,369	0/0:17,0:17:34.62:0,35,292	0/0:16,2:17:6.94:0,7,260	0/0:22,0:21:53.75:0,54,432	0/0:12,0:12:26.96:0,27,221	0/0:15,0:16:31.97:0,32,251	1/1:6,10:16:24.06:252,24,0	1/1:5,10:15:30.07:315,30,0	0/0:11,0:11:24.69:0,25,198	0/0:21,0:22:52.91:0,53,421	0/0:22,0:22:50.91:0,51,418	0/0:16,0:17:46.98:0,47,375	1/1:5,13:16:1.30:346,1,0	0/1:14,0:14:25.52:26,0,143	0/0:17,0:17:44.93:0,45,369	0/0:15,0:13:23.94:0,24,197	1/1:6,16:22:42.11:447,42,0	1/1:4,15:19:43.92:452,44,0	1/1:4,15:20:33.34:322,33,0	0/0:21,1:22:6.88:0,7,263	0/0:29,0:29:74.90:0,75,616	0/0:18,0:18:50.94:0,51,418	0/1:6,0:6:9.58:10,0,62
chr10	73620214	.	A	ATTTC	9606.97	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-12.880;DP=644;FS=6.487;HRun=0;HaplotypeScore=100.6419;InbreedingCoeff=0.9950;MQ=82.51;MQ0=0;MQRankSum=-4.133;QD=67.65;ReadPosRankSum=2.271;VQSLOD=7.2092;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:54.19:1403,54,0	0/0:6,0:6:18.06:0,18,324	0/0:20,0:20:54.09:0,54,866	0/0:16,0:16:42.14:0,42,752	0/0:29,0:29:84.29:0,84,1545	0/0:18,0:18:51.17:0,51,938	0/0:16,0:16:36.12:0,36,662	0/0:29,0:29:75.24:0,75,1319	0/0:38,0:38:99:0,108,1957	0/0:34,0:34:96.32:0,96,1727	0/0:17,0:17:48.16:0,48,867	1/1:2,25:27:78.27:2017,78,0	1/1:2,23:25:59.78:1582,60,0	0/0:18,0:18:48.16:0,48,865	0/0:33,0:33:81.26:0,81,1449	0/0:26,0:26:75.23:0,75,1319	0/0:16,0:16:45.12:0,45,762	0/0:22,0:22:57.19:0,57,1035	0/0:20,0:20:47.35:0,47,808	0/0:33,0:33:93.26:0,93,1616	0/0:23,0:23:66.23:0,66,1210	1/1:2,28:31:90.27:2229,90,0	1/1:1,23:24:60.19:1583,60,0	1/1:2,11:14:30.10:792,30,0	0/0:22,0:22:63.22:0,63,1159	0/0:27,0:27:69.24:0,69,1265	0/0:33,0:33:99:0,99,1745	0/0:6,0:6:15.05:0,15,276
chr10	73620882	.	G	GCC	2995.71	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.318;DP=380;FS=12.972;HRun=0;HaplotypeScore=69.9990;InbreedingCoeff=0.9314;MQ=66.49;MQ0=0;MQRankSum=-12.216;QD=31.87;ReadPosRankSum=0.704;VQSLOD=5.0999;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:31:73.59:1057,74,0	0/0:1,0:1:3.01:0,3,49	0/0:4,0:5:9.03:0,9,145	0/0:9,0:9:12.04:0,12,174	0/0:10,0:10:30.10:0,30,489	0/0:13,0:13:39.13:0,39,636	0/0:21,0:21:63.16:0,63,957	0/0:23,0:23:69.24:0,69,1122	0/0:9,0:9:27.09:0,27,438	1/1:2,8:10:24.08:342,24,0	1/1:2,5:8:17.99:188,18,0	1/1:1,12:13:39.11:519,39,0	1/1:0,8:8:24.08:329,24,0	0/0:21,0:21:60.20:0,60,978	0/0:19,0:19:57.19:0,57,930	0/0:17,0:17:51.16:0,51,808	0/0:36,0:36:99:0,108,1762	0/0:15,0:15:42.14:0,42,685	0/0:12,0:12:36.12:0,36,584	0/0:6,0:6:15.05:0,15,243	0/0:16,0:16:48.16:0,48,783	1/1:0,6:6:18.06:246,18,0	1/1:2,3:5:12.01:142,12,0	1/1:1,5:6:6.02:81,6,0	1/1:1,6:7:21.07:299,21,0	0/0:12,0:12:36.12:0,36,585	0/0:30,0:30:90.31:0,90,1468	0/0:11,0:11:33.11:0,33,538
chr10	73620883	.	T	TCTC	5050.04	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.549;DP=400;FS=8.398;HRun=0;HaplotypeScore=84.4563;InbreedingCoeff=0.9311;MQ=64.91;MQ0=0;MQRankSum=-13.277;QD=43.91;ReadPosRankSum=-0.957;VQSLOD=5.5795;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,29:36:99:1702,99,0	0/0:1,0:1:3.01:0,3,56	0/0:5,0:5:9.02:0,9,138	0/0:8,0:8:9.03:0,9,152	0/0:11,0:11:30.10:0,30,559	0/0:13,0:13:39.13:0,39,727	0/0:21,0:21:63.22:0,63,1138	0/0:23,0:23:69.24:0,69,1265	0/0:9,0:9:27.08:0,27,472	1/1:7,8:15:42.12:701,42,0	1/1:4,5:10:18.06:324,18,0	1/1:2,11:14:39.13:703,39,0	1/1:1,8:9:27.09:472,27,0	0/0:20,0:20:60.21:0,60,1119	0/0:19,0:19:57.20:0,57,1063	0/0:17,0:17:51.17:0,51,944	0/0:36,0:36:99:0,108,2014	0/0:14,0:15:42.14:0,42,782	0/0:12,0:12:36.12:0,36,668	0/0:6,0:6:15.05:0,15,279	0/0:16,0:16:48.16:0,48,895	1/1:2,6:8:24.08:432,24,0	1/1:6,3:9:15.05:257,15,0	1/1:1,5:6:6.02:107,6,0	1/1:2,6:8:21.06:353,21,0	0/0:12,0:12:36.12:0,36,671	0/0:30,0:30:90.31:0,90,1678	0/0:11,0:11:33.11:0,33,613
chr10	73621693	.	A	AGTGTGTGTGT	1915.68	PASS	AB=1.000;AC=17;AF=0.315;AN=54;BaseQRankSum=8.202;DP=612;FS=2.716;HRun=0;HaplotypeScore=184.6832;InbreedingCoeff=0.7840;MQ=57.08;MQ0=38;MQRankSum=-8.256;QD=11.40;ReadPosRankSum=-1.233;VQSLOD=2.4795;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:11,0:10:24.08:0,24,753	0/0:44,0:15:35.53:0,36,858	0/0:47,0:16:25.46:0,25,470	0/0:24,0:23:58.85:0,59,1796	0/0:25,0:23:51.17:0,51,1514	0/0:21,0:19:48.15:0,48,1509	0/0:26,0:26:72.71:0,73,2138	0/0:17,0:17:39.13:0,39,1304	0/1:20,0:20:21.44:21,0,61	1/1:12,0:12:19.77:146,20,0	1/1:11,11:21:8.82:160,9,0	1/1:23,0:22:41.80:1007,42,0	0/0:21,0:19:38.55:0,39,1148	0/0:25,0:24:60.19:0,60,1916	0/0:21,0:21:50.39:0,50,1434	0/0:21,0:17:42.08:0,42,1206	1/1:16,0:15:7.10:343,7,0	0/0:18,0:17:37.32:0,37,1081	0/0:23,0:20:47.45:0,47,1176	0/0:24,0:21:60.17:0,60,1645	1/1:18,0:17:3:25,3,0	1/1:13,0:13:2.81:25,3,0	1/1:12,12:27:11.71:356,12,0	1/1:15,0:15:2.74:12,3,0	0/0:16,0:14:16.75:0,17,555	0/0:20,0:20:54.17:0,54,1315	0/0:10,0:9:19.93:0,20,399
chr10	73621696	.	G	GTTGTT	3106.75	PASS	AB=0.749;AC=8;AF=0.143;AN=56;BaseQRankSum=7.222;DP=610;FS=8.329;HRun=0;HaplotypeScore=147.0204;InbreedingCoeff=0.6417;MQ=57.65;MQ0=25;MQRankSum=-9.076;QD=28.50;ReadPosRankSum=-5.611;VQSLOD=1.2392;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:30:16.47:72,16,0	0/0:11,0:11:30.09:0,30,628	0/0:44,0:15:36.28:0,36,700	0/0:47,0:16:22.58:0,23,424	0/0:24,0:24:59.58:0,60,1281	0/0:24,0:23:54.16:0,54,1131	0/0:18,0:18:51.65:0,52,1158	0/0:27,0:27:75.68:0,76,1593	0/0:16,0:16:39.13:0,39,899	0/1:5,18:23:2.13:1934,0,2	1/1:9,7:19:40.71:906,41,0	0/0:25,0:24:4.65:0,5,91	0/0:23,0:22:32.06:0,32,413	0/0:20,0:19:38.23:0,38,896	0/0:24,0:24:57.20:0,57,1314	0/0:18,0:18:47.60:0,48,1105	0/0:20,0:17:42.09:0,42,895	0/0:14,0:14:16.18:0,16,157	0/0:18,0:17:48.63:0,49,768	0/0:23,0:20:44.34:0,44,746	0/0:22,0:22:63.20:0,63,1179	0/0:17,0:17:4.58:0,5,68	0/0:15,0:15:5.51:0,6,75	0/0:26,0:25:2.38:0,2,137	1/1:6,0:21:15:276,15,0	0/1:14,1:14:68.60:69,0,361	0/0:17,0:17:48.16:0,48,796	0/0:7,0:6:17.89:0,18,262
chr10	73621807	.	CTT	C	869.33	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.725;DP=702;FS=1.798;HRun=3;HaplotypeScore=84.4436;InbreedingCoeff=0.9998;MQ=89.36;MQ0=0;MQRankSum=-1.956;QD=34.77;ReadPosRankSum=1.916;VQSLOD=3.5676;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.18:0,84,1488	0/0:13,0:13:39.13:0,39,726	0/0:23,0:23:66.19:0,66,1172	0/0:31,0:31:90.24:0,90,1607	0/0:28,0:28:84.26:0,84,1508	0/0:28,0:28:84.23:0,84,1516	0/0:21,0:21:63.20:0,63,1176	0/0:33,0:33:96.33:0,96,1855	0/0:17,0:17:48.13:0,48,890	0/0:28,0:28:84.23:0,84,1543	0/0:30,0:30:87.29:0,87,1643	0/0:20,0:20:57.10:0,57,993	0/0:25,0:25:75.23:0,75,1384	0/0:34,0:34:99:0,102,1964	1/1:0,25:25:63.21:964,63,0	0/0:19,0:19:57.16:0,57,1065	0/0:29,0:29:84.23:0,84,1536	0/0:16,0:16:48.13:0,48,890	0/0:16,0:16:48.15:0,48,871	0/0:35,0:35:99:0,105,1934	0/0:28,0:28:81.22:0,81,1462	0/0:23,0:23:69.20:0,69,1237	0/0:23,0:23:66.22:0,66,1244	0/0:17,0:17:45.07:0,45,793	0/0:32,0:32:96.32:0,96,1819	0/0:25,0:25:75.24:0,75,1415	0/0:42,0:42:99:0,123,2358	0/0:13,0:13:39.13:0,39,753
chr10	73624094	.	C	CTTT	2499.75	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=4.716;DP=576;FS=1.494;HRun=14;HaplotypeScore=98.8729;InbreedingCoeff=0.8019;MQ=75.98;MQ0=2;MQRankSum=-1.515;QD=9.80;ReadPosRankSum=-2.311;VQSLOD=0.4738;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,1:35:4.56:227,5,0	0/0:7,0:7:11.93:0,12,115	0/0:29,0:19:22.87:0,23,193	0/1:29,0:19:10.45:10,0,85	0/0:21,0:22:41.37:0,41,410	0/0:29,0:30:77.77:0,78,771	0/0:11,0:13:19.09:0,19,208	0/0:18,0:21:35.57:0,36,382	0/0:13,0:14:20.62:0,21,202	1/1:8,11:22:43.61:510,44,0	1/1:9,4:19:27:324,27,0	1/1:9,0:13:4.23:26,4,0	1/1:6,1:16:25.44:178,25,0	0/0:15,0:15:17.62:0,18,183	0/0:18,0:20:40.46:0,40,415	0/0:26,0:27:53.48:0,53,534	0/0:26,0:28:58.55:0,59,612	1/1:4,3:17:24.08:369,24,0	0/0:21,0:24:30.91:0,31,289	0/0:17,0:20:32.55:0,33,326	0/0:18,0:18:18.19:0,18,204	1/1:5,1:22:28.91:245,29,0	1/1:8,1:20:28.97:245,29,0	1/1:3,1:31:47.47:358,47,0	1/1:3,2:13:15.01:186,15,0	0/1:17,0:18:33.99:34,0,191	0/0:21,0:22:37.86:0,38,395	0/0:9,0:11:19.57:0,20,204
chr10	73624495	.	GT	G	2646.01	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.431;DP=684;FS=6.118;HRun=10;HaplotypeScore=82.9907;InbreedingCoeff=0.9444;MQ=71.88;MQ0=0;MQRankSum=-0.528;QD=18.12;ReadPosRankSum=2.609;VQSLOD=4.3967;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,23:28:47.98:417,48,0	0/0:10,0:11:32.90:0,33,330	0/0:26,2:22:0.05:0,0,388	0/0:20,0:17:14.05:0,14,176	0/0:20,0:20:51.14:0,51,564	0/0:20,1:21:37.12:0,37,638	0/0:20,1:21:28.11:0,28,538	0/0:39,0:41:82.11:0,82,852	0/0:23,0:24:66:0,66,703	0/0:7,0:36:89.71:0,90,523	0/0:5,0:24:55.07:0,55,310	1/1:2,27:29:71.98:625,72,0	1/1:0,18:18:41.99:364,42,0	0/0:22,0:22:57.13:0,57,614	0/0:26,0:28:71.84:0,72,744	0/0:29,0:29:81.22:0,81,896	0/0:24,0:24:57.13:0,57,621	0/0:21,0:21:60:0,60,644	0/0:16,0:16:33.09:0,33,365	0/0:25,0:25:66.18:0,66,729	0/0:34,2:36:45.52:0,46,932	1/1:5,22:27:71.50:598,72,0	1/1:3,19:23:56.96:490,57,0	1/1:4,17:21:38.99:338,39,0	0/0:2,0:17:25.57:0,26,128	0/0:27,0:28:53.98:0,54,578	0/0:30,0:30:75.14:0,75,806	0/0:16,0:16:35.99:0,36,367
chr10	73627243	.	TC	T	1882.13	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.843;DP=639;FS=0.534;HRun=2;HaplotypeScore=63.4911;InbreedingCoeff=0.9962;MQ=86.09;MQ0=0;MQRankSum=0.307;QD=35.51;ReadPosRankSum=1.986;VQSLOD=4.2028;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,99,1463	0/0:10,0:10:30.08:0,30,415	0/0:30,0:30:44.75:0,45,1026	0/0:26,0:26:72.24:0,72,1032	0/0:24,0:24:72.24:0,72,1071	0/0:18,0:18:42.12:0,42,589	0/0:26,0:26:75.25:0,75,1115	0/0:40,0:40:99:0,117,1719	0/0:13,0:13:30.10:0,30,449	1/1:0,26:26:78.25:1012,78,0	1/1:0,10:10:27.09:351,27,0	0/0:18,0:18:54.18:0,54,801	0/0:17,0:17:45.14:0,45,654	0/0:30,0:30:69.23:0,69,1032	0/0:25,0:25:69.22:0,69,1014	0/0:17,0:17:48.15:0,48,700	0/0:34,0:33:78.25:0,78,1148	0/0:20,0:19:48.14:0,48,696	0/0:29,0:29:87.29:0,87,1298	0/0:21,0:21:63.21:0,63,944	0/0:50,0:50:99:0,141,2089	0/0:10,0:10:30.09:0,30,430	0/0:15,0:15:45.15:0,45,662	0/0:32,0:32:75.25:0,75,1122	1/1:0,17:17:51.17:662,51,0	0/0:17,0:17:51.17:0,51,764	0/0:15,0:15:42.14:0,42,629	0/0:6,0:6:18.06:0,18,270
chr10	73628551	.	CT	C	1729.36	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=6.690;DP=576;FS=0.453;HRun=10;HaplotypeScore=121.1184;InbreedingCoeff=0.8628;MQ=63.01;MQ0=3;MQRankSum=-4.833;QD=13.83;ReadPosRankSum=3.248;VQSLOD=3.2343;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:57.03:0,57,582	0/0:13,0:13:26.90:0,27,268	0/0:23,0:16:9.23:0,9,199	0/1:20,0:10:9.39:9,0,83	0/0:18,0:18:30.08:0,30,332	0/0:16,0:18:28.67:0,29,263	0/0:22,0:22:60.16:0,60,663	0/0:31,0:32:62.73:0,63,656	0/0:12,0:12:29.87:0,30,311	0/0:25,0:23:48.13:0,48,527	0/0:26,0:26:40.44:0,40,569	1/1:4,9:13:26.67:219,27,0	1/1:3,16:18:47.98:416,48,0	0/0:13,0:13:27.07:0,27,299	0/0:19,0:19:39.01:0,39,406	0/0:20,0:20:44.31:0,44,442	0/0:22,0:21:34.62:0,35,356	1/1:9,8:17:3.63:139,4,0	0/0:23,0:24:53.80:0,54,518	0/0:22,1:23:22.85:0,23,419	0/0:11,0:11:27.01:0,27,275	1/1:5,15:20:44.98:390,45,0	1/1:6,12:18:17.73:374,18,0	1/1:3,15:18:41.98:364,42,0	0/0:17,0:17:51.02:0,51,538	0/0:24,0:24:48.57:0,49,520	0/0:39,0:39:79.50:0,80,760	0/0:10,0:8:21.06:0,21,232
chr10	73628576	.	T	TC	2782.67	PASS	AB=0.960;AC=19;AF=0.339;AN=56;BaseQRankSum=12.085;DP=617;FS=9.584;HRun=0;HaplotypeScore=108.5571;InbreedingCoeff=0.9041;MQ=41.87;MQ0=38;MQRankSum=-4.247;QD=11.79;ReadPosRankSum=6.248;VQSLOD=3.9072;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:38:56.41:481,56,0	0/0:12,1:13:32.17:0,32,245	0/0:15,0:4:5.96:0,6,52	0/0:16,0:4:8.96:0,9,81	0/0:36,0:34:77.24:0,77,557	0/0:16,0:15:38.15:0,38,294	0/0:19,0:16:38.86:0,39,323	0/0:35,0:34:85.75:0,86,639	0/0:16,0:16:44.79:0,45,359	1/1:28,2:25:5.97:230,6,0	0/1:23,1:23:1.62:229,0,2	1/1:7,8:14:29.80:241,30,0	1/1:10,11:19:53.27:399,53,0	0/0:17,0:16:37.91:0,38,310	0/0:17,0:16:41.74:0,42,336	0/0:17,0:15:41.69:0,42,337	0/0:25,0:18:24.63:0,25,238	1/1:20,2:19:10.02:158,10,0	0/0:17,0:16:47.42:0,47,380	0/0:29,0:28:74.77:0,75,606	0/0:10,0:10:24.41:0,24,200	1/1:6,9:15:44.12:318,44,0	1/1:12,10:18:42.78:301,43,0	1/1:17,9:22:47.05:384,47,0	1/1:22,0:20:34.66:251,35,0	0/0:25,0:23:68.25:0,68,518	0/0:44,0:42:99:0,111,871	0/0:14,0:9:20.51:0,21,179
chr10	73630422	.	AAGTGT	A	1203.16	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.196;DP=709;FS=0.000;HRun=0;HaplotypeScore=129.1361;InbreedingCoeff=0.9998;MQ=81.64;MQ0=0;MQRankSum=-2.462;QD=46.28;ReadPosRankSum=1.436;VQSLOD=3.4295;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,169,5054	0/0:12,0:12:36.12:0,36,1133	0/0:18,0:18:54.09:0,54,1339	0/0:20,0:20:57.14:0,57,1479	0/0:20,0:20:57.20:0,57,1775	0/0:21,0:21:63.22:0,63,1915	0/0:22,0:22:66.21:0,66,1945	0/0:30,0:30:90.31:0,90,2763	0/0:28,0:28:75.26:0,75,2360	0/0:36,0:36:99:0,105,3215	0/0:19,0:19:51.18:0,51,1573	0/0:22,0:22:63.22:0,63,1975	0/0:28,0:28:81.28:0,81,2469	0/0:21,0:21:63.22:0,63,1920	0/0:38,0:38:99:0,111,3487	0/0:33,0:33:99:0,99,2984	0/0:25,0:25:75.26:0,75,2313	1/1:2,24:26:59.95:1298,60,0	0/0:20,0:20:60.19:0,60,1741	0/0:28,0:28:84.29:0,84,2564	0/0:31,0:31:90.31:0,90,2762	0/0:24,0:23:66.23:0,66,2041	0/0:25,0:25:72.25:0,72,2214	0/0:20,0:20:60.21:0,60,1857	0/0:15,0:15:42.14:0,42,1304	0/0:31,0:31:93.32:0,93,2920	0/0:22,0:21:66.19:0,66,1973	0/0:14,0:14:42.14:0,42,1312
chr10	73631270	.	GCCCCC	G	1828.81	PASS	AB=1.000;AC=15;AF=0.313;AN=48;BaseQRankSum=-1.574;DP=214;FS=14.204;HRun=14;HaplotypeScore=39.2380;InbreedingCoeff=0.5729;MQ=83.68;MQ0=2;MQRankSum=-1.315;QD=19.88;ReadPosRankSum=7.103;VQSLOD=-0.6757;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,21:32:47.96:794,48,0	./.	0/0:30,0:15:27.46:0,27,482	0/0:22,0:7:8.95:0,9,72	0/1:3,0:3:0.04:0,0,0	0/0:5,0:5:5.93:0,6,41	0/0:4,0:4:3.01:0,3,72	0/0:2,0:2:0:0,0,0	./.	0/0:5,0:5:3:0,3,26	0/0:4,0:4:2.97:0,3,20	1/1:2,8:10:18.03:297,18,0	1/1:1,9:10:21.03:346,21,0	0/0:7,0:7:2.97:0,3,20	0/0:1,0:1:3.01:0,3,83	0/0:6,0:6:5.92:0,6,39	0/0:2,0:3:9.03:0,9,214	1/1:4,4:8:4.81:97,5,0	0/0:1,0:3:6.02:0,6,103	./.	0/0:6,0:6:8.91:0,9,66	1/1:4,3:7:2.90:50,3,0	1/1:1,3:4:2.97:50,3,0	1/1:7,11:18:20.97:347,21,0	0/0:4,0:4:2.92:0,3,20	0/0:5,0:5:6.02:0,6,85	0/0:7,0:7:11.90:0,12,130	./.
chr10	73633492	.	G	GAA	1521.92	PASS	AB=0.842;AC=8;AF=0.143;AN=56;BaseQRankSum=-2.385;DP=495;FS=12.120;HRun=10;HaplotypeScore=58.7141;InbreedingCoeff=0.8163;MQ=49.19;MQ0=17;MQRankSum=-0.627;QD=17.70;ReadPosRankSum=2.053;VQSLOD=0.8232;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:45.09:0,45,458	0/0:14,0:14:36.03:0,36,350	0/0:16,0:9:23.71:0,24,200	0/1:14,0:4:0.01:0,0,0	0/0:28,0:29:74.78:0,75,721	0/0:18,0:19:26.63:0,27,327	0/0:15,0:15:36.05:0,36,359	0/0:31,0:24:50:0,50,517	0/0:18,0:18:39.08:0,39,397	1/1:6,14:20:17.73:605,18,0	1/1:5,11:17:30.09:431,30,0	0/0:17,0:17:30.01:0,30,304	0/0:17,0:18:29.77:0,30,357	0/0:16,0:16:29.90:0,30,297	0/0:13,0:13:30.02:0,30,296	0/0:8,0:8:24:0,24,232	0/0:35,0:35:72.07:0,72,725	0/1:7,0:11:7.57:22,0,8	0/0:14,0:10:27.04:0,27,274	0/0:20,0:20:51.06:0,51,518	0/0:18,0:16:45.06:0,45,447	0/0:22,0:21:50.94:0,51,512	0/0:12,0:11:24.03:0,24,242	0/0:5,0:5:12.02:0,12,122	1/1:3,16:20:44.59:610,45,0	0/0:13,0:13:36.08:0,36,366	0/0:20,0:19:54.11:0,54,547	0/0:12,0:12:29.95:0,30,284
chr10	73633667	.	A	AG	1793.13	PASS	AB=0.718;AC=13;AF=0.241;AN=54;BaseQRankSum=4.794;DP=610;FS=7.475;HRun=2;HaplotypeScore=61.8584;InbreedingCoeff=0.5082;MQ=44.47;MQ0=52;MQRankSum=-9.853;QD=15.20;ReadPosRankSum=0.189;VQSLOD=2.8525;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:17,5:16:19.09:197,0,19	0/0:15,0:13:30.09:0,30,370	0/0:28,0:7:17.73:0,18,196	0/0:14,1:5:9.03:0,9,111	0/0:33,0:30:78.25:0,78,965	0/0:19,0:19:51.16:0,51,632	0/0:14,0:10:24.03:0,24,280	0/0:39,0:25:51.15:0,51,621	0/0:30,0:27:66.21:0,66,813	0/1:7,11:17:69.34:432,0,69	0/1:10,2:8:68.14:68,0,130	1/1:3,9:11:24.08:345,24,0	0/1:4,12:13:1.05:415,0,1	0/0:24,0:24:51.16:0,51,632	0/0:30,0:27:60.19:0,60,743	0/0:17,0:16:39.11:0,39,471	0/0:43,0:38:81.25:0,81,1003	1/1:6,4:6:9.03:129,9,0	0/0:20,0:15:36.07:0,36,429	0/0:36,0:32:80.98:0,81,991	0/0:26,0:24:51.12:0,51,614	1/1:3,8:9:15.05:215,15,0	0/1:5,3:8:31.06:31,0,99	./.	1/1:6,3:9:9.03:129,9,0	0/0:30,0:27:31.58:0,32,746	0/0:41,0:39:81.56:0,82,1240	0/0:30,0:26:63.07:0,63,781
chr10	73634573	.	GAC	G	249.73	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.321;DP=604;FS=5.273;HRun=0;HaplotypeScore=52.8357;InbreedingCoeff=0.8682;MQ=41.19;MQ0=81;MQRankSum=-1.994;QD=15.61;ReadPosRankSum=-0.130;VQSLOD=2.7664;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:23:48.10:0,48,812	0/0:12,0:11:12.04:0,12,219	0/0:28,0:10:30.10:0,30,530	0/0:33,0:7:21.06:0,21,327	0/0:15,0:14:32.47:0,32,554	0/0:19,0:9:18.06:0,18,327	0/0:21,0:20:51.13:0,51,896	0/0:26,0:14:36.07:0,36,566	0/0:30,0:25:69.24:0,69,1257	0/0:29,0:22:60.18:0,60,1066	0/0:7,0:6:18.06:0,18,328	0/0:28,0:24:51.11:0,51,875	0/0:28,0:22:54.19:0,54,984	0/0:25,0:23:54.19:0,54,982	0/0:20,0:19:45.15:0,45,819	0/0:30,0:26:60.21:0,60,1093	0/0:26,0:25:54.18:0,54,975	1/1:1,15:11:24.08:343,24,0	0/0:18,0:13:27.09:0,27,494	0/0:20,0:14:27.09:0,27,493	0/0:36,0:27:72.18:0,72,1217	0/0:14,0:9:15.05:0,15,273	0/0:10,0:9:15.01:0,15,239	0/0:21,0:18:48.14:0,48,846	0/0:11,0:10:21.07:0,21,383	0/0:19,0:11:33.09:0,33,572	0/0:30,0:24:66.23:0,66,1201	0/0:4,0:3:8.98:0,9,100
chr10	73636014	.	CTTAG	C	669.14	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.857;DP=698;FS=9.575;HRun=0;HaplotypeScore=111.9509;InbreedingCoeff=0.9995;MQ=91.54;MQ0=0;MQRankSum=-2.672;QD=35.22;ReadPosRankSum=2.102;VQSLOD=3.2401;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,2911	0/0:11,0:11:33.11:0,33,805	0/0:37,0:37:87.26:0,87,2081	0/0:19,0:19:36.10:0,36,826	0/0:31,0:31:84.29:0,84,2137	0/0:18,0:18:48.16:0,48,1222	0/0:22,0:22:66.23:0,66,1701	0/0:31,0:31:93.32:0,93,2398	0/0:22,0:22:60.19:0,60,1517	0/0:39,0:39:99:0,114,2911	0/0:16,0:16:48.16:0,48,1222	0/0:20,0:20:54.18:0,54,1415	0/0:23,0:23:57.20:0,57,1455	0/0:33,0:33:99:0,99,2576	0/0:33,0:33:96.33:0,96,2475	0/0:16,0:16:42.14:0,42,1092	0/0:23,0:23:66.23:0,66,1728	1/1:2,17:19:42.14:764,42,0	0/0:23,0:23:66.21:0,66,1668	0/0:21,0:21:60.21:0,60,1526	0/0:52,0:52:99:0,154,3927	0/0:25,0:25:72.25:0,72,1841	0/0:16,0:16:48.16:0,48,1249	0/0:24,0:24:72.25:0,72,1842	0/0:22,0:22:63.22:0,63,1651	0/0:27,0:27:78.27:0,78,2026	0/0:18,0:18:51.11:0,51,1216	0/0:18,0:18:45.15:0,45,1160
chr10	73636333	.	G	GTTT	4045.81	PASS	AB=0.548;AC=17;AF=0.304;AN=56;BaseQRankSum=6.437;DP=618;FS=0.431;HRun=11;HaplotypeScore=104.4868;InbreedingCoeff=0.7430;MQ=77.36;MQ0=0;MQRankSum=-3.404;QD=18.14;ReadPosRankSum=1.057;VQSLOD=2.0719;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,3:29:48.16:735,48,0	0/0:10,0:10:14.98:0,15,175	0/0:22,0:21:31.07:0,31,271	0/0:16,0:14:6.27:0,6,70	0/0:38,0:40:99:0,105,1156	0/0:12,0:12:30.07:0,30,351	0/0:19,0:19:51.09:0,51,585	0/0:36,0:37:86.18:0,86,980	0/0:16,0:16:36.01:0,36,421	0/1:4,0:24:23.41:55,0,23	0/1:5,0:26:35.49:61,0,35	1/1:8,18:29:46.64:728,47,0	1/1:6,9:20:39.07:624,39,0	0/0:20,0:20:48.05:0,48,527	0/0:26,0:26:60.10:0,60,700	0/0:23,0:26:64.62:0,65,734	0/0:16,0:18:45.26:0,45,555	0/1:1,0:12:3.67:10,0,4	0/0:18,0:20:47.95:0,48,525	0/0:24,0:24:62.77:0,63,682	0/0:13,0:13:27.03:0,27,315	1/1:9,14:29:60.02:871,60,0	1/1:4,11:18:32.98:512,33,0	1/1:3,7:12:19.31:341,19,0	1/1:4,0:24:30.08:108,30,0	0/0:19,0:21:5.52:0,6,457	0/0:37,0:37:84.11:0,84,982	0/0:16,0:17:38.09:0,38,420
chr10	73637064	.	AATATATATATATAT	A	7334.42	PASS	AB=0.750;AC=21;AF=0.420;AN=50;BaseQRankSum=9.273;DP=291;FS=5.773;HRun=0;HaplotypeScore=119.5480;InbreedingCoeff=0.7008;MQ=63.44;MQ0=0;MQRankSum=-8.600;QD=47.32;ReadPosRankSum=3.659;VQSLOD=3.7423;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,20:34:27.09:944,27,0	0/0:3,0:3:3.01:0,3,168	./.	0/0:8,0:5:2.66:0,3,19	0/0:5,0:5:12.04:0,12,604	0/0:3,0:4:6.02:0,6,350	./.	0/0:15,0:23:60.21:0,60,3281	0/0:4,0:5:9.02:0,9,375	1/1:3,17:20:51.16:1803,51,0	1/1:4,18:22:48.12:1280,48,0	1/1:1,5:6:12.04:485,12,0	1/1:8,12:20:36.12:1455,36,0	0/0:5,0:7:18.06:0,18,1053	./.	0/0:2,0:2:6.02:0,6,411	0/0:26,0:28:66.20:0,66,4071	1/1:6,3:9:6.02:243,6,0	0/0:5,0:8:12.04:0,12,547	0/0:6,0:11:24.08:0,24,1156	0/0:1,0:2:3.01:0,3,145	1/1:3,3:6:9.03:274,9,0	1/1:7,5:12:11.69:232,12,0	1/1:6,3:9:3.01:73,3,0	1/1:4,7:11:15.05:330,15,0	0/1:4,2:6:99:215,0,277	0/0:9,0:11:15.49:0,15,444	0/0:10,0:10:6.02:0,6,355
chr10	73637484	.	T	TACC	2288.73	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-2.178;DP=413;FS=0.000;HRun=0;HaplotypeScore=63.3997;InbreedingCoeff=0.8318;MQ=79.31;MQ0=8;MQRankSum=-0.303;QD=18.31;ReadPosRankSum=-0.072;VQSLOD=2.9145;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,3:22:32.46:481,32,0	0/0:4,0:4:9.03:0,9,125	0/0:40,0:24:6.94:0,7,54	0/0:34,0:15:6.90:0,7,85	0/0:9,0:9:14.08:0,14,189	0/0:6,0:6:14.76:0,15,147	0/0:19,0:19:30.10:0,30,414	0/0:16,0:16:18.04:0,18,216	0/0:16,0:16:27.07:0,27,353	1/1:6,0:6:7.57:83,8,0	1/1:6,0:6:2.50:9,2,0	1/1:6,9:15:21.05:382,21,0	1/1:8,5:14:21.06:356,21,0	0/0:14,0:14:23.99:0,24,306	0/0:15,0:15:30.09:0,30,391	0/0:10,0:10:30.07:0,30,368	0/0:12,0:13:33.04:0,33,397	1/1:0,9:10:18.06:358,18,0	0/0:14,0:14:8.62:0,9,121	0/0:8,0:8:17.95:0,18,190	0/0:42,0:42:72.21:0,72,941	1/1:13,0:13:6.01:76,6,0	1/1:4,6:10:6.02:108,6,0	1/1:4,17:21:30.10:596,30,0	1/1:8,0:8:5.78:40,6,0	0/0:11,0:11:21.06:0,21,275	0/0:14,0:13:24.06:0,24,312	0/0:3,0:3:2.98:0,3,42
chr10	73637511	.	A	AACC	409.44	PASS	AB=0.996;AC=12;AF=0.214;AN=56;BaseQRankSum=7.301;DP=452;FS=0.628;HRun=0;HaplotypeScore=71.5533;InbreedingCoeff=0.2728;MQ=55.58;MQ0=16;MQRankSum=-0.606;QD=2.66;ReadPosRankSum=3.576;VQSLOD=1.2751;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:36.18:36,0,379	0/0:7,0:7:17.18:0,17,228	0/0:30,0:9:8.03:0,8,124	0/1:37,0:12:7.44:7,0,41	0/0:9,0:9:23.78:0,24,271	0/0:14,0:14:27.09:0,27,376	0/0:14,0:14:24.05:0,24,316	0/0:14,0:13:14.96:0,15,170	0/0:17,0:17:39.03:0,39,485	1/1:4,5:9:9.92:155,10,0	1/1:5,0:5:9.02:136,9,0	0/1:22,0:21:7.12:7,0,250	0/1:9,0:9:26.49:27,0,26	0/0:14,0:13:24.03:0,24,295	0/0:16,0:16:33.10:0,33,438	0/0:11,0:11:27.08:0,27,363	0/0:25,0:25:51.15:0,51,673	0/1:15,0:15:35.54:36,0,112	0/0:14,0:13:17.69:0,18,236	0/0:8,0:8:12.02:0,12,150	0/0:50,0:50:78.67:0,79,1045	0/0:8,0:8:10.53:0,11,113	0/0:11,0:11:4.94:0,5,88	0/1:22,0:22:60.62:61,0,205	1/1:3,4:7:6.02:98,6,0	0/0:20,0:20:41.22:0,41,525	0/0:13,0:11:20.65:0,21,277	0/0:3,0:3:6.02:0,6,83
chr10	73639272	.	GGGGTGT	G	2380.06	PASS	AB=0.813;AC=19;AF=0.339;AN=56;BaseQRankSum=5.396;DP=531;FS=4.622;HRun=0;HaplotypeScore=118.8735;InbreedingCoeff=0.8149;MQ=76.36;MQ0=10;MQRankSum=0.477;QD=11.78;ReadPosRankSum=3.805;VQSLOD=2.4207;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:25:59.83:474,60,0	0/0:8,0:8:21.02:0,21,200	0/0:26,0:22:52.90:0,53,536	0/0:37,0:25:34.67:0,35,492	0/0:23,0:22:53.25:0,53,496	0/0:14,0:13:27.01:0,27,259	0/0:19,0:18:48.03:0,48,454	0/0:29,0:29:77.63:0,78,694	0/0:17,0:17:44.95:0,45,429	1/1:4,0:21:59.76:501,60,0	1/1:6,0:7:17.98:149,18,0	1/1:0,9:9:5.67:141,6,0	1/1:0,24:24:8.74:217,9,0	0/0:11,0:11:32.40:0,32,303	0/0:19,0:18:55.76:0,56,625	0/1:15,0:15:0.06:0,0,332	0/0:26,0:26:4.23:0,4,653	0/1:14,0:15:1.08:178,0,1	0/0:10,0:10:29.97:0,30,261	0/0:13,0:13:23.98:0,24,250	0/0:41,0:40:99:0,105,917	1/1:18,0:17:44.95:423,45,0	0/1:0,13:13:0:1,0,0	1/1:27,1:28:50.39:381,50,0	1/1:0,0:24:6.02:108,6,0	0/0:17,0:17:28.16:0,28,485	0/0:14,0:13:32.78:0,33,386	0/0:4,0:4:11.98:0,12,99
chr10	73639274	.	GGT	G	862.40	PASS	AB=0.899;AC=36;AF=0.783;AN=46;BaseQRankSum=-0.582;DP=557;FS=8.761;HRun=0;HaplotypeScore=94.5371;InbreedingCoeff=0.1323;MQ=71.91;MQ0=13;MQRankSum=1.164;QD=2.31;ReadPosRankSum=-0.356;VQSLOD=1.1056;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:10,0:10:2.98:22,3,0	./.	./.	1/1:23,0:23:8.68:59,9,0	1/1:11,6:16:3.01:32,3,0	0/0:19,0:18:0:0,0,0	0/0:32,0:32:0:0,0,0	1/1:18,0:18:3.01:32,3,0	1/1:23,0:21:2.84:14,3,0	./.	1/1:10,0:10:5.52:29,6,0	1/1:25,0:25:8.38:42,8,0	1/1:12,1:13:14.82:122,15,0	1/1:18,2:21:20.69:173,21,0	1/1:13,1:15:8.84:71,9,0	0/1:19,8:26:2.08:152,0,2	0/1:18,0:16:0.26:27,0,0	./.	1/1:8,6:14:3.01:32,3,0	1/1:44,0:41:3:26,3,0	1/1:18,0:17:2.69:8,3,0	0/1:13,0:13:0:0,0,0	0/0:30,0:29:2.99:0,3,23	1/1:24,0:24:5.68:28,6,0	1/1:18,0:18:5.95:44,6,0	0/1:11,3:13:16.95:26,0,17	1/1:5,0:5:2.98:21,3,0
chr10	73640202	.	A	AT	917.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.740;DP=677;FS=3.911;HRun=1;HaplotypeScore=66.6368;InbreedingCoeff=0.9958;MQ=87.00;MQ0=0;MQRankSum=-2.627;QD=38.21;ReadPosRankSum=-2.977;VQSLOD=2.9841;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,120,1558	0/0:14,0:14:42.14:0,42,544	0/0:29,0:29:85.48:0,85,1050	0/0:17,0:17:39.09:0,39,488	0/0:29,0:29:84.27:0,84,1091	0/0:20,0:20:60.20:0,60,779	0/0:20,0:20:60.13:0,60,718	1/1:1,22:24:69.22:1012,69,0	0/0:26,0:26:75.24:0,75,974	0/0:29,0:29:87.28:0,87,1117	0/0:16,0:16:48.16:0,48,623	0/0:24,0:24:72.23:0,72,935	0/0:27,0:27:81.21:0,81,1006	0/0:18,0:18:54.16:0,54,685	0/0:22,0:22:66.20:0,66,841	0/0:21,0:21:63.20:0,63,818	0/0:20,0:20:60.20:0,60,779	0/0:24,0:24:66.21:0,66,856	0/0:23,0:23:63.19:0,63,789	0/0:34,0:34:99:0,99,1214	0/0:33,0:33:96.29:0,96,1227	0/0:25,0:25:72.23:0,72,935	0/0:17,0:17:48.16:0,48,623	0/0:21,0:21:21.46:0,21,682	0/0:12,0:12:36.09:0,36,440	0/0:40,0:40:99:0,114,1481	0/0:36,0:35:99:0,108,1386	0/0:11,0:11:33.11:0,33,428
chr10	73641043	.	A	AG	4217.72	PASS	AB=0.920;AC=21;AF=0.375;AN=56;BaseQRankSum=17.593;DP=632;FS=10.174;HRun=3;HaplotypeScore=128.7764;InbreedingCoeff=0.9426;MQ=83.21;MQ0=0;MQRankSum=-17.460;QD=20.47;ReadPosRankSum=-1.112;VQSLOD=3.2819;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,26:31:75.62:698,76,0	0/0:13,0:13:33.09:0,33,383	0/0:20,0:20:54.13:0,54,613	0/0:25,0:25:68.63:0,69,760	0/0:19,0:19:51.14:0,51,600	0/0:17,0:17:45.14:0,45,540	0/0:23,0:23:63.18:0,63,743	0/0:33,0:33:93.27:0,93,1098	0/0:26,0:26:72.22:0,72,864	1/1:8,15:23:51.10:526,51,0	1/1:4,9:13:26.85:260,27,0	1/1:1,20:21:57.61:600,58,0	1/1:6,10:16:36.05:357,36,0	0/0:26,0:26:69.19:0,69,815	0/0:27,0:27:75.23:0,75,899	0/0:27,0:27:81.20:0,81,927	0/0:31,0:31:87.22:0,87,1016	1/1:6,9:15:29.85:275,30,0	0/0:26,0:26:66.18:0,66,765	0/0:19,0:19:49.70:0,50,577	0/0:50,0:50:99:0,132,1556	1/1:2,9:11:32.94:325,33,0	1/1:5,14:19:41.88:411,42,0	1/1:4,14:18:33.01:322,33,0	1/1:3,13:16:43.65:440,44,0	0/1:21,2:23:4.65:5,0,579	0/0:25,0:24:72.22:0,72,864	0/0:19,0:19:54.13:0,54,633
chr10	73641048	.	G	GCTTTA	14126.84	PASS	AB=0.920;AC=21;AF=0.375;AN=56;BaseQRankSum=16.336;DP=628;FS=5.593;HRun=0;HaplotypeScore=148.8442;InbreedingCoeff=0.9237;MQ=85.25;MQ0=0;MQRankSum=-17.528;QD=63.35;ReadPosRankSum=-1.825;VQSLOD=5.2796;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,26:38:96.13:2269,96,0	0/0:12,0:12:36.12:0,36,833	0/0:22,0:22:60.06:0,60,1193	0/0:27,0:27:75.15:0,75,1417	0/0:19,0:19:51.18:0,51,1187	0/0:15,0:15:45.15:0,45,1048	0/0:22,0:22:63.22:0,63,1432	0/0:33,0:33:99:0,99,2133	0/0:24,0:24:72.25:0,72,1677	1/1:6,15:21:60.19:1647,60,0	1/1:3,9:12:33.09:804,33,0	1/1:6,20:26:78.27:2216,78,0	1/1:7,9:17:42.14:1164,42,0	0/0:23,0:23:69.22:0,69,1562	0/0:25,0:25:75.24:0,75,1702	0/0:26,0:26:75.26:0,75,1746	0/0:29,0:29:84.27:0,84,1910	1/1:6,9:15:39.13:1106,39,0	0/0:21,0:21:63.21:0,63,1356	0/0:16,0:16:45.15:0,45,1043	0/0:46,0:46:99:0,132,2984	1/1:6,9:15:45.14:1142,45,0	1/1:4,14:18:45.14:1195,45,0	1/1:7,14:21:42.13:1080,42,0	1/1:4,13:17:48.16:1391,48,0	0/1:21,2:23:99:114,0,1290	0/0:27,0:26:81.25:0,81,1748	0/0:18,0:18:54.18:0,54,1157
chr10	73642349	.	A	AT	2795.70	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-9.413;DP=548;FS=1.466;HRun=6;HaplotypeScore=49.9001;InbreedingCoeff=0.9401;MQ=74.97;MQ0=0;MQRankSum=-0.667;QD=26.88;ReadPosRankSum=3.130;VQSLOD=3.9223;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:63.20:793,63,0	0/0:10,0:10:27.04:0,27,268	0/0:22,0:21:35.89:0,36,405	0/1:10,0:9:1.16:1,0,162	0/0:16,0:16:45.07:0,45,445	0/0:24,0:24:60.12:0,60,606	0/0:15,0:15:36.08:0,36,367	0/0:24,0:24:51.11:0,51,520	0/0:13,0:13:36.08:0,36,367	0/0:24,0:24:72.16:0,72,734	0/0:34,0:34:96.20:0,96,970	1/1:1,20:21:57.18:717,57,0	1/1:2,10:12:30.10:377,30,0	0/0:20,0:20:60.14:0,60,612	0/0:21,0:21:48.10:0,48,487	0/0:15,0:14:45.08:0,45,446	0/0:30,0:30:75.16:0,75,765	0/0:27,0:27:72.12:0,72,724	0/0:31,0:31:84.15:0,84,840	0/0:32,0:32:87.19:0,87,887	0/0:10,0:10:30.05:0,30,299	1/1:1,11:12:30.10:377,30,0	1/1:0,12:12:32.84:415,33,0	1/1:0,10:10:24.08:302,24,0	0/0:23,0:23:69.16:0,69,704	0/0:19,0:19:57.12:0,57,575	0/0:26,0:27:77.20:0,77,769	0/0:7,0:7:21.05:0,21,214
chr10	73644677	.	A	AT	1415.91	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.335;DP=441;FS=5.461;HRun=9;HaplotypeScore=47.6963;InbreedingCoeff=0.9298;MQ=79.44;MQ0=0;MQRankSum=2.058;QD=26.72;ReadPosRankSum=-1.619;VQSLOD=3.6293;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:47.97:0,48,413	0/0:7,0:7:21:0,21,182	0/0:17,0:18:20.28:0,20,236	0/0:5,0:5:6.47:0,6,53	0/0:18,0:18:53.99:0,54,469	0/0:23,0:23:65.99:0,66,573	0/0:23,0:23:56.02:0,56,475	0/0:19,1:19:41.96:0,42,362	0/0:15,0:15:35.99:0,36,313	1/1:2,16:18:51.14:563,51,0	1/1:2,15:17:45.12:498,45,0	0/0:7,0:7:17.99:0,18,156	0/0:3,0:3:9:0,9,78	0/0:11,0:11:26.50:0,26,229	0/0:18,0:18:47.99:0,48,417	0/0:9,0:9:23.98:0,24,208	0/0:29,0:29:80.98:0,81,703	0/0:26,0:26:65.96:0,66,568	0/0:14,0:14:35.97:0,36,309	0/0:26,0:26:68.98:0,69,599	0/0:13,0:13:32.97:0,33,282	0/0:14,0:14:38.99:0,39,338	0/0:16,0:16:44.99:0,45,391	0/0:14,0:14:26.97:0,27,234	1/1:0,18:18:45.12:498,45,0	0/0:18,0:18:44.98:0,45,391	0/0:20,0:20:56.99:0,57,495	0/0:4,0:4:12:0,12,104
chr10	73648592	.	CAAG	C	911.13	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.131;DP=657;FS=0.000;HRun=0;HaplotypeScore=88.6013;InbreedingCoeff=0.9977;MQ=77.56;MQ0=1;MQRankSum=-1.897;QD=43.39;ReadPosRankSum=2.490;VQSLOD=4.9423;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,2688	0/0:9,0:9:27.09:0,27,665	0/0:24,0:24:72.24:0,72,1582	0/0:11,0:11:33.11:0,33,715	0/0:29,0:29:87.28:0,87,2081	0/0:22,0:21:60.21:0,60,1452	0/0:21,0:21:63.20:0,63,1491	0/0:37,0:37:99:0,108,2557	0/0:24,0:24:72.22:0,72,1671	0/0:22,0:22:63.17:0,63,1496	0/0:18,0:18:54.17:0,54,1276	0/0:23,0:23:69.24:0,69,1687	0/0:17,0:17:51.17:0,51,1199	0/0:26,0:26:75.26:0,75,1835	0/0:24,0:24:72.23:0,72,1725	0/0:29,0:28:87.27:0,87,2010	0/0:34,0:34:99:0,102,2456	1/1:0,21:21:54.19:1006,54,0	0/0:18,0:18:54.16:0,54,1209	0/0:27,0:27:81.22:0,81,1793	0/0:42,0:42:99:0,123,3008	0/0:19,0:19:57.20:0,57,1394	0/0:14,0:14:42.14:0,42,1011	0/0:20,0:20:57.20:0,57,1405	0/0:24,0:24:72.18:0,72,1719	0/0:20,0:20:60.18:0,60,1335	0/0:34,0:34:99:0,99,2280	0/0:10,0:10:27.09:0,27,665
chr10	73648735	.	CAAA	C	2988.57	PASS	AB=0.667;AC=8;AF=0.143;AN=56;BaseQRankSum=14.767;DP=695;FS=1.186;HRun=3;HaplotypeScore=119.9286;InbreedingCoeff=0.3179;MQ=65.70;MQ0=3;MQRankSum=-0.363;QD=17.08;ReadPosRankSum=5.469;VQSLOD=0.5447;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,30:56:46.98:1040,0,47	0/0:5,0:5:15.05:0,15,286	0/0:40,0:31:90.25:0,90,1338	0/0:31,0:29:84.27:0,84,1284	0/0:29,0:29:87.24:0,87,1853	0/0:20,0:20:60.20:0,60,1069	0/0:24,0:24:63.49:0,63,1232	0/0:29,0:28:84.24:0,84,1428	0/0:28,0:28:84.23:0,84,1685	0/0:16,0:16:39.37:0,39,908	0/0:27,0:27:81.26:0,81,1575	0/1:15,13:28:65.80:400,0,66	0/1:11,10:21:25.33:355,0,25	0/0:25,0:25:75.26:0,75,1698	0/0:28,0:28:84.29:0,84,1942	0/0:29,0:29:87.28:0,87,1700	0/0:27,0:27:81.23:0,81,1599	0/0:12,0:12:6.74:0,7,343	0/0:21,0:20:59.65:0,60,862	0/0:27,0:27:81.25:0,81,1427	0/0:22,0:22:66.22:0,66,1241	1/1:8,9:17:6.72:355,7,0	1/1:7,15:22:5.79:424,6,0	0/1:14,16:30:76.38:550,0,76	0/0:8,0:8:21.07:0,21,435	0/0:29,0:29:87.25:0,87,1638	0/0:32,0:31:96.31:0,96,2129	0/0:11,0:11:33.11:0,33,603
chr10	73648739	.	CA	C	954.05	PASS	AB=0.654;AC=6;AF=0.107;AN=56;BaseQRankSum=15.033;DP=698;FS=1.784;HRun=3;HaplotypeScore=101.4770;InbreedingCoeff=-0.1200;MQ=69.04;MQ0=3;MQRankSum=-2.276;QD=5.48;ReadPosRankSum=5.416;VQSLOD=0.5982;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,30:56:99:385,0,141	0/0:7,0:7:18.02:0,18,218	0/0:40,0:32:93.31:0,93,1290	0/0:31,0:29:81.26:0,81,1076	0/0:30,0:30:87.26:0,87,1194	0/0:21,0:21:57.19:0,57,797	0/0:23,0:23:67.47:0,67,932	0/0:32,0:31:84.24:0,84,1095	0/0:27,0:27:75.24:0,75,1048	0/0:17,0:17:43.38:0,43,572	0/0:26,0:26:69.23:0,69,974	0/1:15,13:28:99:128,0,153	0/1:11,10:21:81.38:109,0,81	0/0:25,0:25:75.22:0,75,1036	0/0:29,0:29:81.27:0,81,1159	0/0:29,0:29:87.26:0,87,1196	0/0:28,0:28:78.25:0,78,1086	0/0:13,0:13:34.88:0,35,458	0/0:20,0:19:57.04:0,57,746	0/0:24,0:24:69.22:0,69,952	0/0:22,0:22:66.22:0,66,930	0/1:5,9:14:33.71:107,0,34	0/1:10,13:23:29.07:134,0,29	0/1:15,16:31:80.52:215,0,81	0/0:8,0:8:21.06:0,21,283	0/0:31,0:31:87.29:0,87,1220	0/0:30,0:29:90.28:0,90,1253	0/0:11,0:11:33.11:0,33,461
chr10	73648803	.	TGGG	T	992.03	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.622;DP=619;FS=0.000;HRun=4;HaplotypeScore=117.8448;InbreedingCoeff=0.9203;MQ=71.03;MQ0=0;MQRankSum=-8.308;QD=28.34;ReadPosRankSum=-1.042;VQSLOD=0.3787;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,114,2683	0/0:7,0:7:21.07:0,21,496	0/0:26,0:25:72.21:0,72,1645	0/0:24,0:22:66.23:0,66,1511	0/0:16,0:16:45.15:0,45,1063	0/0:26,0:26:75.26:0,75,1772	0/0:25,0:25:75.26:0,75,1774	0/0:26,0:26:75.25:0,75,1730	0/0:30,0:30:90.31:0,90,2129	1/1:5,8:14:24.77:395,25,0	1/1:0,10:10:24.08:389,24,0	0/0:31,0:31:90.31:0,90,2126	0/0:25,0:25:75.26:0,75,1742	0/0:25,0:25:72.25:0,72,1702	0/0:20,0:20:60.21:0,60,1419	0/0:31,0:31:90.31:0,90,2130	0/0:31,0:31:87.29:0,87,1985	0/0:24,0:24:66.23:0,66,1547	0/0:17,0:17:51.18:0,51,1205	0/0:22,0:22:66.23:0,66,1561	0/0:30,0:30:87.26:0,87,2011	0/0:18,0:18:51.17:0,51,1118	0/0:11,0:11:33.11:0,33,778	0/0:28,0:28:81.28:0,81,1908	1/1:0,11:11:21.07:349,21,0	0/0:16,1:17:1.24:0,1,1042	0/0:22,0:22:63.22:0,63,1487	0/0:10,0:10:30.10:0,30,708
chr10	73649307	.	CT	C	1576.40	PASS	AB=0.774;AC=20;AF=0.357;AN=56;BaseQRankSum=8.162;DP=584;FS=0.939;HRun=14;HaplotypeScore=67.0590;InbreedingCoeff=0.7027;MQ=72.44;MQ0=2;MQRankSum=1.807;QD=6.65;ReadPosRankSum=2.884;VQSLOD=2.6939;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,24:36:42.81:292,43,0	0/0:4,0:4:9.01:0,9,84	0/0:21,0:16:11.49:0,11,94	0/0:15,0:11:10.46:0,10,61	0/1:20,1:23:3.12:3,0,260	0/0:20,0:20:44.86:0,45,384	0/0:29,1:31:32.44:0,32,448	0/0:28,2:30:44.13:0,44,579	0/0:24,1:25:24.97:0,25,366	1/1:7,10:19:30.75:197,31,0	1/1:8,7:17:15.80:94,16,0	1/1:6,14:20:32.59:226,33,0	0/1:7,11:18:1.20:138,0,1	0/0:14,1:15:9.43:0,9,221	0/0:15,2:17:24.44:0,24,359	0/0:16,1:17:21.44:0,21,334	0/0:27,0:28:53.18:0,53,506	0/0:12,1:14:5.61:0,6,224	0/0:17,0:19:32:0,32,300	0/0:32,0:32:55.21:0,55,534	0/0:26,3:29:4.29:0,4,453	1/1:8,14:22:19.75:245,20,0	1/1:11,15:27:20.95:208,21,0	1/1:2,13:15:32.70:226,33,0	1/1:6,7:14:19.78:129,20,0	0/0:22,1:29:13.09:0,13,267	0/1:17,2:21:3.52:4,0,248	0/1:3,1:5:15.41:15,0,44
chr10	73649419	.	T	TACTACTA	640.98	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.704;DP=719;FS=3.547;HRun=0;HaplotypeScore=158.5840;InbreedingCoeff=0.9911;MQ=76.61;MQ0=0;MQRankSum=-4.178;QD=53.41;ReadPosRankSum=2.287;VQSLOD=3.8741;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,3895	0/0:11,0:11:33.11:0,33,915	0/0:18,0:18:54.19:0,54,1378	0/0:15,0:15:45.11:0,45,1108	0/0:28,0:28:81.26:0,81,2091	0/0:28,0:27:81.28:0,81,2222	0/0:41,0:41:99:0,123,3274	0/0:31,0:31:93.30:0,93,2362	0/0:36,0:36:99:0,102,2608	0/0:26,0:26:78.26:0,78,1990	0/0:22,0:22:63.22:0,63,1756	0/0:27,0:27:81.25:0,81,2135	0/0:23,0:23:69.24:0,69,1812	0/0:24,0:24:66.19:0,66,1648	0/0:38,0:38:99:0,114,2973	0/0:27,0:27:78.24:0,78,2048	0/0:22,0:22:66.20:0,66,1724	1/1:1,8:12:18.06:732,18,0	0/0:19,0:19:54.19:0,54,1486	0/0:26,0:26:78.27:0,78,2124	0/0:58,0:58:99:0,175,4501	0/0:18,0:18:54.19:0,54,1510	0/0:15,0:15:42.14:0,42,1084	0/0:25,0:25:72.25:0,72,1964	0/0:17,0:17:51.15:0,51,1365	0/0:28,0:28:84.28:0,84,2176	0/0:26,0:26:78.27:0,78,2131	0/0:10,0:10:30.10:0,30,825
chr10	73650121	.	GTCCT	G	379.24	PASS	AB=0.962;AC=11;AF=0.306;AN=36;BaseQRankSum=2.620;DP=471;FS=22.173;HRun=0;HaplotypeScore=84.2151;InbreedingCoeff=0.4860;MQ=65.43;MQ0=7;MQRankSum=2.261;QD=4.03;ReadPosRankSum=1.627;VQSLOD=0.0479;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:8,2:10:6.02:90,6,0	./.	./.	0/0:18,0:18:6.02:0,6,113	0/0:26,0:25:18.06:0,18,391	1/1:17,0:17:2.99:24,3,0	./.	./.	0/0:23,0:23:12.04:0,12,216	0/0:17,0:17:0.47:0,0,1	1/1:10,1:11:9.03:122,9,0	1/1:19,1:19:12.02:153,12,0	0/0:15,0:15:6.02:0,6,125	0/0:9,0:9:3.01:0,3,46	./.	0/1:24,1:25:29.85:30,0,219	./.	0/0:14,0:14:3.01:0,3,69	0/0:12,0:12:3.01:0,3,69	0/0:29,0:29:27.05:0,27,447	./.	./.	1/1:9,2:11:4.73:87,5,0	./.	0/0:20,0:20:12.03:0,12,224	0/0:13,0:13:9.03:0,9,206	0/0:24,0:25:3.01:0,3,52
chr10	73652896	.	GTTTTTT	G	2080.97	PASS	AB=0.988;AC=14;AF=0.250;AN=56;BaseQRankSum=0.541;DP=573;FS=1.739;HRun=14;HaplotypeScore=120.9023;InbreedingCoeff=0.2439;MQ=59.54;MQ0=2;MQRankSum=-2.881;QD=9.17;ReadPosRankSum=-0.847;VQSLOD=0.2928;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:32:3.30:3,0,1430	0/0:7,0:7:18.05:0,18,428	0/0:25,0:9:23.46:0,23,300	0/0:16,0:5:7.42:0,7,75	0/0:21,0:28:70.12:0,70,1597	0/0:23,0:25:66.22:0,66,1842	0/0:17,0:17:45.09:0,45,1058	0/0:21,0:22:54.09:0,54,1255	0/0:17,0:17:47.80:0,48,1184	1/1:6,20:26:58.89:855,59,0	1/1:1,9:10:23.85:351,24,0	0/1:16,0:16:39.42:39,0,673	0/1:21,0:21:31.91:32,0,890	0/0:19,0:19:54.08:0,54,1308	0/0:14,0:17:45.15:0,45,1213	0/0:12,0:14:33.11:0,33,837	0/0:31,0:33:78.52:0,79,1784	0/1:31,0:30:47.03:47,0,1271	0/0:26,0:27:66.14:0,66,1485	0/0:29,0:31:81.16:0,81,1969	0/0:3,0:5:12.02:0,12,256	0/1:12,0:12:49.62:50,0,314	0/1:11,0:11:45.43:45,0,524	0/1:21,0:21:71.07:71,0,715	1/1:7,21:28:38.96:743,39,0	0/1:16,1:18:15.11:15,0,802	0/0:28,0:29:81.09:0,81,2047	0/0:11,0:11:20.55:0,21,524
chr10	73652902	.	T	TG	4342.65	PASS	AB=0.934;AC=16;AF=0.286;AN=56;BaseQRankSum=-9.606;DP=583;FS=9.388;HRun=0;HaplotypeScore=66.5287;InbreedingCoeff=0.8029;MQ=62.49;MQ0=3;MQRankSum=3.399;QD=22.74;ReadPosRankSum=7.891;VQSLOD=5.3486;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:32:72.23:907,72,0	0/0:6,0:6:18.03:0,18,205	0/0:31,0:13:32.43:0,32,277	0/0:16,0:5:7.42:0,7,48	0/0:27,0:27:64.33:0,64,768	0/0:24,0:24:66.58:0,67,760	0/0:17,0:17:50.83:0,51,483	0/0:22,0:22:58.56:0,59,606	0/0:19,0:18:50.68:0,51,533	0/1:22,0:23:88.63:229,0,89	0/1:9,1:10:34.57:77,0,35	1/1:0,21:21:36.11:451,36,0	1/1:0,22:22:56.92:717,57,0	0/0:20,0:20:59.83:0,60,533	0/0:19,0:19:50.97:0,51,541	0/0:17,0:17:35.82:0,36,398	0/0:33,0:33:84.49:0,84,950	1/1:2,33:34:59.07:785,59,0	0/0:25,0:25:75.03:0,75,823	0/0:29,0:29:80.94:0,81,844	0/0:4,0:4:9.47:0,9,78	1/1:2,13:15:29.58:285,30,0	1/1:1,10:11:29.88:353,30,0	1/1:0,20:21:44.73:538,45,0	0/0:24,0:24:45.68:0,46,219	0/0:17,0:17:47.58:0,48,502	0/0:32,0:32:80.72:0,81,881	0/0:10,0:10:26.54:0,27,291
chr10	73653068	.	AC	A	1189.12	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.340;DP=665;FS=9.234;HRun=3;HaplotypeScore=74.3859;InbreedingCoeff=0.9956;MQ=79.37;MQ0=0;MQRankSum=-0.527;QD=32.14;ReadPosRankSum=2.891;VQSLOD=3.7495;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:99:1284,105,0	0/0:7,0:7:21.07:0,21,302	0/0:16,0:16:42.14:0,42,576	0/0:16,0:16:33.56:0,34,428	0/0:31,0:31:87.28:0,87,1211	0/0:22,0:22:66.22:0,66,947	0/0:22,0:22:60.18:0,60,844	0/0:27,0:27:75.23:0,75,1032	0/0:18,0:18:48.15:0,48,672	0/0:31,0:31:90.26:0,90,1239	0/0:12,0:12:36.12:0,36,506	0/0:31,0:31:93.30:0,93,1315	0/0:25,0:25:69.19:0,69,969	0/0:36,0:36:99:0,108,1537	0/0:19,0:19:57.19:0,57,820	0/0:19,0:19:54.15:0,54,720	0/0:20,0:20:60.20:0,60,862	0/0:18,0:18:51.13:0,51,709	0/0:24,0:24:66.22:0,66,950	0/0:26,0:26:78.26:0,78,1120	0/0:23,0:23:69.22:0,69,974	0/0:21,0:21:60.20:0,60,863	0/0:30,0:30:90.29:0,90,1274	0/0:34,0:34:99:0,102,1430	0/0:34,0:34:99:0,99,1419	0/0:25,0:25:75.25:0,75,1078	0/0:26,0:26:75.24:0,75,1060	0/0:15,0:15:45.15:0,45,647
chr10	73654815	.	TAC	T	4141.29	PASS	AB=0.804;AC=21;AF=0.375;AN=56;BaseQRankSum=12.947;DP=647;FS=1.260;HRun=0;HaplotypeScore=111.7349;InbreedingCoeff=0.7482;MQ=64.55;MQ0=7;MQRankSum=-5.896;QD=16.18;ReadPosRankSum=-0.285;VQSLOD=3.7459;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,6:15:11.95:142,12,0	0/1:10,1:11:2.45:2,0,415	0/0:28,0:20:23.92:0,24,285	0/0:19,0:11:3.89:0,4,32	0/0:27,1:28:39.67:0,40,1052	0/0:32,0:32:74.70:0,75,1068	0/0:17,1:18:33.10:0,33,498	0/0:21,0:21:36.08:0,36,521	0/0:27,0:27:33.71:0,34,986	1/1:12,16:30:59.80:658,60,0	1/1:12,18:30:51.15:604,51,0	1/1:12,15:27:51.12:573,51,0	1/1:5,15:20:45.14:533,45,0	0/0:14,0:14:26.93:0,27,428	0/0:23,0:23:51.15:0,51,778	0/0:16,1:17:18.95:0,19,438	0/0:22,1:22:48.13:0,48,734	1/1:11,5:16:20.67:207,21,0	0/1:18,2:20:11.51:12,0,263	0/0:27,0:27:72.24:0,72,1118	0/0:28,0:27:63.19:0,63,948	0/1:7,17:23:8.48:369,0,8	1/1:14,18:31:47.94:522,48,0	1/1:4,6:8:15.02:165,15,0	1/1:7,12:18:30.09:355,30,0	0/0:38,1:39:48.74:0,49,1204	0/0:32,0:31:41.40:0,41,874	0/0:13,1:14:0.50:0,1,422
chr10	73654844	.	GTA	G	4816.43	PASS	AB=0.952;AC=25;AF=0.446;AN=56;BaseQRankSum=15.208;DP=622;FS=9.234;HRun=0;HaplotypeScore=107.5682;InbreedingCoeff=0.6753;MQ=57.02;MQ0=18;MQRankSum=-5.483;QD=15.54;ReadPosRankSum=1.676;VQSLOD=4.6016;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,12:15:14.25:186,14,0	0/1:9,2:11:44.90:45,0,338	0/1:16,0:8:4.05:4,0,30	0/1:23,0:7:0.03:0,0,15	0/0:28,0:28:75.69:0,76,1158	0/0:32,0:32:70.18:0,70,1279	0/1:19,2:21:35.85:36,0,481	0/0:31,0:31:72.16:0,72,1068	0/0:22,1:23:22.69:0,23,874	1/1:11,18:25:56.96:674,57,0	1/1:6,20:26:39.11:474,39,0	1/1:5,17:23:50.98:599,51,0	1/1:3,22:23:50.99:612,51,0	0/0:13,0:13:24.08:0,24,396	0/0:18,0:18:42.09:0,42,614	0/0:14,1:14:1.61:0,2,506	0/0:28,0:28:69.23:0,69,1119	1/1:5,6:10:15.05:186,15,0	0/0:15,0:15:30.09:0,30,472	0/0:26,1:27:27.18:0,27,876	0/0:20,1:19:31.52:0,32,602	1/1:5,20:24:45.03:540,45,0	1/1:7,21:26:54.14:648,54,0	1/1:6,9:12:21.03:247,21,0	1/1:1,23:24:45.14:562,45,0	0/0:36,1:37:48.39:0,48,1258	0/0:23,0:23:25.17:0,25,881	0/1:14,0:14:4.95:5,0,276
chr10	73655717	.	A	AT	330.55	PASS	AB=0.576;AC=1;AF=0.018;AN=56;BaseQRankSum=-3.426;DP=638;FS=3.368;HRun=8;HaplotypeScore=63.7789;InbreedingCoeff=0.1135;MQ=70.67;MQ0=0;MQRankSum=-0.834;QD=17.40;ReadPosRankSum=-1.375;VQSLOD=3.4225;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:57:0,57,522	0/0:11,0:11:33.01:0,33,299	0/0:25,0:24:4.10:0,4,314	0/0:13,0:13:23.19:0,23,241	0/0:34,0:34:87.04:0,87,796	0/0:22,0:22:62.06:0,62,553	0/0:17,0:17:47.97:0,48,429	0/0:26,0:26:59.93:0,60,535	0/0:18,0:18:38.99:0,39,352	0/0:35,0:35:99:0,102,933	0/0:28,0:28:77.96:0,78,698	0/0:30,0:30:81.04:0,81,741	0/0:21,0:21:56.98:0,57,513	0/0:26,0:26:69.01:0,69,625	0/0:22,0:22:63:0,63,566	0/0:16,0:16:32.99:0,33,302	0/0:20,0:20:54.03:0,54,494	0/1:5,14:19:9.80:405,0,10	0/0:18,0:18:38.93:0,39,357	0/0:22,0:22:60.03:0,60,549	0/0:26,0:26:69.02:0,69,626	0/0:19,0:19:57.02:0,57,518	0/0:23,0:23:62.97:0,63,563	0/0:17,0:17:42.02:0,42,384	0/0:23,1:24:31.41:0,31,542	0/0:41,0:41:99:0,123,1126	0/0:33,0:33:90.02:0,90,814	0/0:6,0:6:17.99:0,18,159
chr10	73657088	.	CTGTG	C	1049.71	PASS	AB=1.000;AC=15;AF=0.313;AN=48;BaseQRankSum=2.613;DP=498;FS=0.000;HRun=0;HaplotypeScore=115.9908;InbreedingCoeff=0.7254;MQ=38.70;MQ0=61;MQRankSum=2.809;QD=6.86;ReadPosRankSum=0.075;VQSLOD=2.4583;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:10,0:8:15.52:0,16,227	./.	./.	0/0:13,0:13:12.51:0,13,182	0/1:27,0:23:1.61:2,0,572	0/0:28,0:21:9.03:0,9,149	0/0:18,0:11:6.49:0,6,78	0/0:19,0:18:18.33:0,18,212	1/1:17,0:25:21.41:310,21,0	0/0:13,0:16:2.80:0,3,13	1/1:13,0:13:15.03:203,15,0	1/1:17,0:17:16.99:291,17,0	0/0:10,0:9:14.56:0,15,261	0/0:12,0:11:6:0,6,96	0/0:13,0:11:9.55:0,10,103	0/0:28,0:22:36.03:0,36,471	1/1:6,0:7:0.92:26,1,0	0/0:14,0:13:8.96:0,9,86	0/0:15,0:14:8.92:0,9,143	0/0:47,0:32:17.94:0,18,239	./.	1/1:8,11:19:3.21:16,3,0	1/1:24,0:17:14.90:223,15,0	1/1:14,0:12:11.77:145,12,0	0/0:21,0:17:30.03:0,30,428	0/0:18,0:16:15.94:0,16,183	0/0:15,0:14:26.54:0,27,316
chr10	73657764	.	CCT	C	250.15	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.975;DP=745;FS=4.792;HRun=0;HaplotypeScore=112.4850;InbreedingCoeff=0.9925;MQ=77.43;MQ0=0;MQRankSum=-2.447;QD=31.27;ReadPosRankSum=1.200;VQSLOD=5.4704;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,157,3084	0/0:9,0:9:27.08:0,27,490	0/0:14,0:14:23.63:0,24,615	0/0:16,0:16:39.10:0,39,678	0/0:24,0:24:72.22:0,72,1363	0/0:26,0:26:78.27:0,78,1584	0/0:30,0:30:90.29:0,90,1750	0/0:34,0:34:99:0,102,2067	0/0:28,0:28:84.27:0,84,1659	0/0:37,0:37:99:0,111,2197	0/0:21,0:21:63.21:0,63,1212	0/0:35,0:35:99:0,105,2047	0/0:25,0:25:75.24:0,75,1485	0/0:21,0:21:63.19:0,63,1234	0/0:39,0:39:99:0,117,2376	0/0:31,0:31:93.32:0,93,1889	0/0:25,0:25:75.26:0,75,1499	1/1:0,8:8:21.07:342,21,0	0/0:21,0:21:63.22:0,63,1278	0/0:29,0:29:87.29:0,87,1717	0/0:41,0:41:99:0,100,2399	0/0:13,0:13:36.12:0,36,720	0/0:21,0:21:63.18:0,63,1175	0/0:23,0:23:69.24:0,69,1400	0/0:30,0:30:87.30:0,87,1767	0/0:36,0:36:99:0,108,2154	0/0:38,0:38:99:0,114,2254	0/0:18,0:18:54.19:0,54,1083
chr10	73660523	.	G	GC	3617.38	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.806;DP=571;FS=5.726;HRun=0;HaplotypeScore=50.8647;InbreedingCoeff=0.9253;MQ=85.62;MQ0=0;MQRankSum=-0.426;QD=44.66;ReadPosRankSum=1.049;VQSLOD=3.7610;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.29:0,87,1215	0/0:13,0:13:39.13:0,39,545	0/0:23,0:23:4.73:0,5,741	0/0:15,0:15:3.92:0,4,481	0/0:26,0:26:75.24:0,75,1035	0/0:19,0:19:57.19:0,57,797	0/0:28,0:28:84.26:0,84,1155	0/0:26,0:26:75.23:0,75,1018	0/0:14,0:14:39.13:0,39,545	1/1:0,25:25:75.24:1173,75,0	1/1:0,23:23:69.24:1102,69,0	0/0:23,0:23:69.23:0,69,963	0/0:25,0:25:75.23:0,75,1029	0/0:23,0:23:69.23:0,69,965	0/0:17,0:17:51.14:0,51,692	0/0:20,0:20:60.18:0,60,820	0/0:15,0:15:45.15:0,45,627	1/1:0,13:13:36.12:575,36,0	0/0:20,0:20:60.20:0,60,839	0/0:21,0:21:60.20:0,60,839	0/0:18,0:18:48.16:0,48,670	0/0:14,0:14:42.13:0,42,569	0/0:14,0:14:42.14:0,42,586	0/0:22,0:22:66.22:0,66,923	1/1:0,20:20:48.16:768,48,0	0/0:18,0:18:54.18:0,54,754	0/0:32,0:32:96.32:0,96,1343	0/0:14,0:14:42.14:0,42,582
chr10	73661985	.	A	ATGTGTG	2556.56	PASS	AB=0.943;AC=19;AF=0.352;AN=54;BaseQRankSum=3.290;DP=561;FS=2.379;HRun=0;HaplotypeScore=150.3505;InbreedingCoeff=0.6627;MQ=55.97;MQ0=15;MQRankSum=-6.375;QD=10.65;ReadPosRankSum=-2.178;VQSLOD=2.1142;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:18:28.99:221,0,29	0/0:9,0:9:15.05:0,15,310	0/0:35,0:13:5.99:0,6,80	./.	0/0:27,0:27:54.18:0,54,1085	0/0:23,0:23:51.14:0,51,955	0/0:12,0:12:18.06:0,18,343	0/0:28,0:26:36.10:0,36,624	0/0:18,0:17:29.77:0,30,522	1/1:10,0:15:16.85:177,17,0	1/1:19,0:30:12.96:206,13,0	1/1:12,3:17:17.87:398,18,0	1/1:14,6:21:6.02:195,6,0	0/0:15,0:14:24.08:0,24,497	0/0:14,0:13:12.04:0,12,234	0/0:16,0:17:33.09:0,33,621	0/1:25,0:25:43.62:44,0,453	1/1:12,0:22:12.04:282,12,0	0/0:16,0:16:8.96:0,9,93	0/0:23,0:23:37.01:0,37,713	0/0:10,0:9:8.98:0,9,110	1/1:15,8:24:18.06:553,18,0	1/1:15,7:23:15.05:350,15,0	1/1:14,0:13:5.68:92,6,0	0/1:18,0:20:35.65:233,0,36	0/0:11,0:11:20.94:0,21,412	0/0:29,0:29:51.13:0,51,962	0/0:11,0:11:23.90:0,24,452
chr10	73665063	.	AGT	A	525.14	PASS	AB=0.970;AC=14;AF=0.250;AN=56;BaseQRankSum=4.098;DP=709;FS=22.602;HRun=0;HaplotypeScore=120.2293;InbreedingCoeff=0.1744;MQ=72.98;MQ0=11;MQRankSum=1.416;QD=2.17;ReadPosRankSum=3.077;VQSLOD=0.8159;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:39:18.31:18,0,82	0/0:11,0:11:12.02:0,12,154	0/0:36,0:28:2.88:0,3,15	0/0:51,0:39:5.77:0,6,43	0/0:19,0:25:35.99:0,36,397	0/1:15,0:15:44.48:44,0,54	0/0:27,0:27:27.06:0,27,363	0/1:31,0:31:5.79:6,0,79	0/0:22,0:21:27.09:0,27,403	1/1:20,2:20:17.77:133,18,0	1/1:6,6:12:5.74:55,6,0	0/0:15,0:15:8.75:0,9,72	0/0:27,0:26:14.38:0,14,110	0/0:34,0:33:60.08:0,60,723	0/1:26,0:26:8.77:9,0,483	0/0:23,4:27:5.63:0,6,395	0/0:25,0:25:35.93:0,36,427	0/0:17,0:15:10.43:0,10,62	0/0:15,0:14:8.94:0,9,94	0/1:14,0:14:12.31:12,0,246	0/0:68,0:67:23.77:0,24,664	0/0:19,0:19:11.97:0,12,111	0/0:12,0:12:6.44:0,6,47	0/1:34,0:34:21.36:34,0,21	1/1:9,11:19:35.99:352,36,0	0/0:35,0:36:26.97:0,27,485	0/1:16,3:19:18.40:18,0,123	0/1:8,0:7:2.20:2,0,73
chr10	73665099	.	T	TGAGAGA	1460.45	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=7.834;DP=789;FS=25.613;HRun=0;HaplotypeScore=169.8210;InbreedingCoeff=0.7366;MQ=50.60;MQ0=38;MQRankSum=-1.445;QD=5.68;ReadPosRankSum=0.618;VQSLOD=1.2279;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,25:41:2.62:65,3,0	0/0:8,0:7:12.04:0,12,224	0/0:51,0:6:11.96:0,12,184	0/0:56,0:12:11.40:0,11,213	0/0:36,0:34:69.23:0,69,1367	0/0:14,0:14:33.04:0,33,569	0/0:27,0:26:66.04:0,66,1265	0/0:31,0:29:37.15:0,37,1173	0/0:22,0:21:59.71:0,60,1158	1/1:30,0:28:35.64:501,36,0	1/1:23,0:23:4.80:38,5,0	1/1:2,18:24:2.95:99,3,0	1/1:5,18:25:9.50:260,9,0	0/0:30,0:29:57.19:0,57,1145	0/0:39,0:39:81.26:0,81,1572	0/0:27,0:27:48.54:0,49,1042	0/0:22,0:22:39.52:0,40,713	0/0:6,0:5:4.36:0,4,31	0/0:19,0:19:36.09:0,36,707	0/0:16,0:15:35.84:0,36,671	0/0:64,0:62:99:0,117,2344	1/1:3,20:25:5.90:201,6,0	1/1:1,11:16:3.48:91,3,0	1/1:15,19:37:11.56:231,12,0	0/1:34,0:33:6.67:151,0,7	0/0:30,0:30:8.63:0,9,1124	0/0:23,0:22:34.59:0,35,646	0/0:11,0:9:21.03:0,21,380
chr10	73665119	.	AGT	A	1236.64	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.920;DP=819;FS=1.985;HRun=0;HaplotypeScore=127.0292;InbreedingCoeff=0.9624;MQ=55.00;MQ0=31;MQRankSum=2.335;QD=13.89;ReadPosRankSum=0.872;VQSLOD=3.1707;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:25.37:0,25,308	0/0:5,0:5:12.04:0,12,197	0/0:72,0:17:31.92:0,32,489	0/0:72,0:25:53.04:0,53,731	0/0:30,0:29:35.06:0,35,1094	0/0:20,0:20:45.14:0,45,709	0/0:27,0:26:63.19:0,63,975	0/0:35,0:33:72.20:0,72,1075	0/0:22,0:22:62.72:0,63,1022	1/1:5,27:31:78.21:934,78,0	1/1:6,18:24:11.55:131,12,0	0/0:21,0:21:17.78:0,18,232	0/0:21,0:20:29.36:0,29,433	0/0:27,0:26:60.20:0,60,978	0/0:34,0:34:75.24:0,75,1198	0/0:28,0:28:60.20:0,60,958	0/0:21,0:21:38.83:0,39,566	0/0:12,0:12:29.14:0,29,200	0/0:22,1:23:14.17:0,14,695	0/0:18,0:17:48.16:0,48,777	0/0:59,1:58:95.21:0,95,1977	0/0:25,0:25:36.68:0,37,438	0/0:18,0:18:18.53:0,19,269	0/0:38,0:38:34:0,34,519	1/1:9,24:32:27.04:311,27,0	0/0:30,0:30:26.07:0,26,944	0/0:22,0:21:42.14:0,42,688	0/0:14,0:13:33.11:0,33,536
chr10	73666100	.	TTCTCTCTCTCTCTCTCTCTCTCTCTC	T	196.89	PASS	AB=1.000;AC=12;AF=0.316;AN=38;BaseQRankSum=3.125;DP=492;FS=11.236;HRun=0;HaplotypeScore=250.6127;InbreedingCoeff=0.4486;MQ=68.44;MQ0=19;MQRankSum=1.648;QD=1.53;ReadPosRankSum=2.405;VQSLOD=1.2912;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:28:0.08:0,0,134	0/0:7,0:7:5.99:0,6,286	0/0:27,0:14:0.47:0,0,1	./.	./.	0/0:22,0:21:11.89:0,12,362	0/0:23,0:23:12.50:0,12,236	0/0:25,0:23:11.79:0,12,42	0/0:19,0:18:9.03:0,9,422	1/1:10,3:13:5.98:125,6,0	./.	./.	0/0:16,0:16:6.02:0,6,232	0/0:23,0:22:3.01:0,3,261	./.	0/0:11,0:11:0.47:0,0,1	0/0:22,0:19:4.56:0,5,150	0/0:14,0:11:15.05:0,15,485	0/0:11,0:11:2.49:0,2,6	./.	1/1:23,0:23:3.01:36,3,0	./.	./.	./.	1/1:8,3:11:3.01:131,3,0	1/1:26,0:24:0.47:1,0,0	0/1:18,0:18:0:0,0,0	1/1:6,0:4:1.55:4,2,0
chr10	73666338	.	T	TA	1146.74	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=-3.967;DP=265;FS=0.000;HRun=5;HaplotypeScore=28.2484;InbreedingCoeff=0.8109;MQ=64.56;MQ0=0;MQRankSum=-0.541;QD=27.97;ReadPosRankSum=2.229;VQSLOD=2.5245;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.16:0,75,795	0/0:4,0:4:12.02:0,12,121	0/0:4,0:3:6.01:0,6,64	0/0:6,0:4:8.69:0,9,71	0/0:10,0:10:24.05:0,24,251	0/0:15,0:15:42.06:0,42,439	0/0:7,0:7:12.03:0,12,129	0/0:23,0:23:57.10:0,57,595	0/0:3,0:3:9.02:0,9,97	1/1:2,7:9:21.07:275,21,0	1/1:0,6:6:15.05:197,15,0	0/0:6,0:6:9.02:0,9,97	0/0:6,0:6:12.03:0,12,129	0/0:9,0:9:24.06:0,24,258	0/0:2,0:2:6.02:0,6,64	0/0:7,0:7:15.01:0,15,150	0/0:17,0:17:48.10:0,48,506	1/1:1,19:20:51.17:670,51,0	0/0:12,0:12:36.09:0,36,387	0/0:8,0:8:21.04:0,21,219	0/0:8,0:8:21.05:0,21,226	./.	0/0:4,0:4:9.02:0,9,96	0/0:4,0:4:5.99:0,6,55	1/1:2,4:6:12.04:158,12,0	0/0:20,1:21:11.59:0,12,455	0/0:12,0:12:33.04:0,33,336	0/0:9,0:9:27.07:0,27,290
chr10	73667689	.	TTA	T	889.44	PASS	AB=0.694;AC=5;AF=0.089;AN=56;BaseQRankSum=8.311;DP=497;FS=34.791;HRun=0;HaplotypeScore=69.4191;InbreedingCoeff=-0.1066;MQ=51.58;MQ0=35;MQRankSum=-7.445;QD=13.08;ReadPosRankSum=2.309;VQSLOD=1.1179;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,6:15:99:199,0,424	0/0:6,0:6:15.05:0,15,292	0/0:19,0:2:6.02:0,6,117	0/0:30,0:8:19.50:0,20,265	0/0:27,0:27:66.23:0,66,1306	0/0:14,0:14:33.11:0,33,671	0/0:15,0:15:42.10:0,42,777	0/0:30,0:29:83.95:0,84,1562	0/0:15,0:15:45.15:0,45,891	0/0:13,0:13:39.13:0,39,793	0/0:10,0:10:24.08:0,24,461	0/1:7,5:12:99:157,0,219	0/1:6,8:14:99:336,0,323	0/0:20,0:18:48.16:0,48,968	0/0:14,0:14:33.11:0,33,661	0/0:13,0:13:39.13:0,39,773	0/0:27,0:27:63.22:0,63,1234	0/0:29,0:26:60.17:0,60,1165	0/0:20,0:20:57.20:0,57,1157	0/0:24,0:24:57.18:0,57,1066	0/0:31,0:28:72.25:0,72,1446	0/1:6,5:11:99:116,0,338	0/1:8,6:14:99:199,0,340	0/0:15,2:16:21.07:0,21,426	0/0:7,0:7:15.05:0,15,305	0/0:21,0:20:60.19:0,60,1165	0/0:23,0:23:60.21:0,60,1191	0/0:4,0:4:9.03:0,9,183
chr10	73667710	.	C	CA	940.66	PASS	AB=0.671;AC=5;AF=0.089;AN=56;BaseQRankSum=9.867;DP=516;FS=40.836;HRun=0;HaplotypeScore=75.5793;InbreedingCoeff=-0.1065;MQ=68.16;MQ0=7;MQRankSum=-9.539;QD=12.54;ReadPosRankSum=2.288;VQSLOD=2.1683;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,8:19:99:233,0,289	0/0:7,0:7:21.07:0,21,293	0/0:13,0:6:15.05:0,15,205	0/0:26,0:17:51.11:0,51,649	0/0:30,0:30:87.28:0,87,1193	0/0:20,0:20:57.17:0,57,775	0/0:13,0:13:38.34:0,38,510	0/0:30,0:30:84.28:0,84,1168	0/0:18,0:18:54.18:0,54,753	0/0:19,0:19:54.18:0,54,741	0/0:11,0:11:33.11:0,33,457	0/1:6,5:11:99:164,0,151	0/1:7,10:17:99:305,0,164	0/0:22,0:22:63.04:0,63,832	0/0:17,0:17:48.15:0,48,653	0/0:17,0:17:51.14:0,51,691	0/0:26,0:26:75.25:0,75,1045	0/0:28,0:28:72.23:0,72,989	0/0:17,0:17:45.15:0,45,628	0/0:24,0:24:69.23:0,69,955	0/0:33,0:33:93.23:0,93,1239	0/1:6,7:13:99:156,0,212	0/1:8,7:15:99:199,0,270	0/0:8,2:10:18.06:0,18,249	0/0:8,0:8:24.05:0,24,314	0/0:23,0:23:63.13:0,63,854	0/0:26,0:26:78.19:0,78,1060	0/0:3,0:3:3.01:0,3,42
chr10	73668476	.	G	GCACACA	966.57	PASS	AB=0.918;AC=9;AF=0.161;AN=56;BaseQRankSum=5.596;DP=539;FS=0.687;HRun=0;HaplotypeScore=137.6738;InbreedingCoeff=0.1505;MQ=64.33;MQ0=6;MQRankSum=-5.079;QD=7.79;ReadPosRankSum=-0.913;VQSLOD=1.9855;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:0:0,0,0	0/0:9,0:9:21.06:0,21,301	0/0:23,0:12:19.65:0,20,369	0/0:23,0:15:24.15:0,24,401	0/0:15,0:15:33.11:0,33,615	0/0:22,0:22:60.21:0,60,1247	0/0:27,0:27:58.14:0,58,1147	0/0:20,0:20:57.18:0,57,985	0/0:22,0:22:57.10:0,57,1062	0/1:12,2:16:18.23:424,0,18	1/1:16,0:16:14.50:227,14,0	0/1:12,0:11:80.18:80,0,141	0/1:15,0:15:87.14:87,0,140	0/0:30,0:30:80.41:0,80,1456	0/0:18,0:18:51.08:0,51,937	0/0:18,0:18:38.97:0,39,729	0/0:48,0:46:99:0,129,2533	0/1:11,0:11:25.48:25,0,335	0/0:9,0:8:23.94:0,24,376	0/0:22,0:22:51.60:0,52,1073	0/0:34,0:33:87.17:0,87,1600	0/1:15,0:15:36.46:36,0,159	0/0:13,0:13:17.97:0,18,210	0/0:14,0:14:17.81:0,18,171	0/1:6,6:15:34.40:226,0,34	0/0:17,0:17:46.56:0,47,705	0/0:21,0:21:57.05:0,57,956	0/0:10,0:10:20.74:0,21,434
chr10	73668478	.	GCA	G	296.16	PASS	AB=0.874;AC=13;AF=0.241;AN=54;BaseQRankSum=2.668;DP=575;FS=5.534;HRun=0;HaplotypeScore=98.4790;InbreedingCoeff=-0.3589;MQ=61.75;MQ0=7;MQRankSum=2.366;QD=0.95;ReadPosRankSum=1.534;VQSLOD=1.5684;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:30:5.19:0,5,24	0/0:4,0:9:3.67:0,4,134	./.	0/1:24,0:14:14.31:20,0,14	0/1:11,4:16:7.41:7,0,261	0/0:20,2:22:7.63:0,8,535	0/1:23,5:29:35.01:35,0,439	0/1:21,0:21:23.16:23,0,291	0/1:18,4:23:32.82:33,0,379	0/0:22,0:21:34.47:0,34,302	0/0:21,0:20:11.50:0,12,110	0/0:5,0:19:6:0,6,52	0/0:17,0:17:28.50:0,29,248	0/1:30,0:31:11.35:11,0,623	0/1:18,1:20:0.93:1,0,367	0/1:10,7:17:73.30:73,0,253	0/1:37,8:44:93.18:93,0,989	0/0:12,0:12:10.17:0,10,66	0/0:8,0:7:11.97:0,12,133	0/1:20,2:22:23.87:24,0,486	0/1:28,4:32:56.56:57,0,556	0/0:4,0:17:3:0,3,26	0/0:14,0:14:2.77:0,3,25	0/0:13,0:13:4.93:0,5,29	0/0:17,0:17:14.50:0,15,134	0/0:17,0:17:10.20:0,10,333	0/1:18,1:21:30.24:30,0,335	0/1:6,3:10:27.56:28,0,186
chr10	73668975	.	C	CAA	3646.62	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=1.573;DP=501;FS=0.427;HRun=12;HaplotypeScore=67.2357;InbreedingCoeff=0.9851;MQ=61.32;MQ0=14;MQRankSum=1.100;QD=20.04;ReadPosRankSum=-0.786;VQSLOD=2.7281;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,2:28:42.07:416,42,0	0/0:8,0:8:17.96:0,18,158	0/0:19,0:10:22.01:0,22,160	0/0:12,0:6:11.74:0,12,95	0/0:20,0:21:44.51:0,45,383	0/0:11,0:13:17.60:0,18,198	0/0:15,0:15:35.76:0,36,317	0/0:22,0:23:41.83:0,42,435	0/0:12,0:12:20.93:0,21,194	1/1:8,10:20:32.04:372,32,0	1/1:3,13:18:41:459,41,0	1/1:5,9:15:29.07:354,29,0	1/1:2,11:17:17.03:186,17,0	0/0:15,0:16:32.75:0,33,289	0/0:14,0:17:29.34:0,29,308	0/0:18,0:20:38.38:0,38,320	0/0:20,0:19:54.06:0,54,500	1/1:15,1:19:22.59:228,23,0	0/0:19,0:18:35.45:0,35,379	0/0:20,0:21:35.68:0,36,363	0/0:9,0:10:26.77:0,27,234	1/1:4,12:17:36.06:464,36,0	1/1:8,10:18:39.62:467,40,0	1/1:0,5:6:18.05:239,18,0	1/1:6,13:20:33.11:463,33,0	0/0:26,1:27:14.71:0,15,493	0/0:25,0:30:38.14:0,38,476	0/0:12,0:12:29.73:0,30,261
chr10	73669301	.	GTC	G	1084.50	PASS	AB=0.897;AC=8;AF=0.143;AN=56;BaseQRankSum=6.211;DP=637;FS=0.000;HRun=0;HaplotypeScore=77.8510;InbreedingCoeff=0.6404;MQ=61.24;MQ0=20;MQRankSum=1.737;QD=10.63;ReadPosRankSum=1.202;VQSLOD=3.2113;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:69.13:0,69,1007	0/0:11,0:11:24.06:0,24,341	0/0:29,0:2:3.01:0,3,49	0/0:51,0:14:8.20:0,8,162	0/0:24,0:24:51.15:0,51,794	0/0:22,0:23:47.98:0,48,721	0/0:30,0:30:78.21:0,78,1167	0/0:47,0:46:48.26:0,48,1095	0/1:20,3:24:60.39:60,0,633	1/1:5,21:26:53.78:607,54,0	1/1:3,13:16:27.08:335,27,0	0/0:14,0:14:33.10:0,33,515	0/0:17,1:18:9.22:0,9,631	0/0:17,1:18:10.98:0,11,686	0/1:14,1:15:10.11:10,0,339	0/0:17,0:17:45.15:0,45,724	0/0:25,0:25:63.18:0,63,995	0/0:8,0:8:21.07:0,21,343	0/0:12,0:11:18.04:0,18,268	0/0:15,0:15:30.08:0,30,431	0/0:32,0:32:75.13:0,75,1042	0/0:27,3:29:60.19:0,60,950	0/0:19,0:19:42.10:0,42,634	0/0:21,0:21:57.14:0,57,843	1/1:5,16:21:18.06:223,18,0	0/0:23,0:22:30.98:0,31,721	0/0:22,0:22:47.32:0,47,636	0/0:13,0:10:20.97:0,21,284
chr10	73669901	.	AATATAT	A	787.56	PASS	AB=0.547;AC=8;AF=0.160;AN=50;BaseQRankSum=5.981;DP=255;FS=5.093;HRun=0;HaplotypeScore=58.4569;InbreedingCoeff=0.6085;MQ=84.90;MQ0=7;MQRankSum=-1.632;QD=13.82;ReadPosRankSum=2.931;VQSLOD=1.7122;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:19:3.07:3,0,12	0/0:3,0:3:9.03:0,9,262	0/0:12,0:6:11.95:0,12,105	0/0:40,0:20:4.86:0,5,134	0/0:5,0:5:9.03:0,9,288	0/0:7,0:10:27.09:0,27,653	0/0:3,0:3:6.02:0,6,194	0/0:22,0:23:48.14:0,48,1320	0/0:5,0:5:15.05:0,15,509	1/1:1,6:7:18.06:326,18,0	./.	0/0:2,0:3:0.41:0,0,2	0/1:0,0:8:2.38:11,0,2	0/0:6,0:6:15.05:0,15,502	0/0:9,0:9:21.07:0,21,631	0/0:8,0:8:15.05:0,15,499	0/0:13,0:14:39.13:0,39,1175	1/1:3,11:14:9.03:197,9,0	0/0:13,0:13:27.08:0,27,785	0/0:5,0:6:15.05:0,15,434	0/0:3,0:4:9.03:0,9,260	./.	0/0:4,0:6:2.16:0,2,23	./.	1/1:3,6:8:18.06:385,18,0	0/0:7,0:7:12.04:0,12,404	0/0:7,0:7:21.06:0,21,573	0/0:10,0:10:27.09:0,27,788
chr10	73672074	.	CTTTTCTTTTTTT	C	126.76	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.252;DP=612;FS=4.703;HRun=0;HaplotypeScore=204.3786;InbreedingCoeff=0.8519;MQ=70.40;MQ0=3;MQRankSum=0.018;QD=14.08;ReadPosRankSum=-1.094;VQSLOD=2.0452;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.30:0,87,4898	0/0:14,0:14:39.10:0,39,1794	0/0:22,0:15:26.29:0,26,899	0/0:19,0:12:12.17:0,12,500	0/0:33,0:33:90.30:0,90,4846	0/0:17,0:17:45.15:0,45,2497	0/0:16,0:17:42.14:0,42,2299	0/0:33,0:33:84.28:0,84,3972	0/0:20,0:20:54.19:0,54,3044	0/0:27,0:27:70.12:0,70,3323	0/0:18,0:18:54.17:0,54,2353	0/0:18,0:18:54.19:0,54,2883	0/0:21,0:21:60.20:0,60,2933	0/0:19,0:19:51.18:0,51,2838	0/0:22,0:22:54.19:0,54,3041	0/0:18,0:17:48.16:0,48,2674	0/0:34,0:34:90.31:0,90,4599	1/1:2,7:9:5.96:207,6,0	0/0:18,0:18:41.35:0,41,2026	0/0:26,0:26:69.24:0,69,3799	0/0:13,0:13:24.08:0,24,1271	0/0:24,0:25:66.23:0,66,3567	0/0:16,0:16:48.16:0,48,2532	0/0:14,0:14:36.11:0,36,1976	0/0:25,0:25:54.18:0,54,2598	0/0:35,0:35:93.32:0,93,5246	0/0:35,0:35:96.32:0,96,4772	0/0:14,0:14:42.11:0,42,2050
chr10	73672079	.	C	CT	1177.97	PASS	AB=0.887;AC=8;AF=0.143;AN=56;BaseQRankSum=-4.112;DP=617;FS=0.000;HRun=11;HaplotypeScore=66.3700;InbreedingCoeff=0.4280;MQ=72.45;MQ0=3;MQRankSum=1.035;QD=9.06;ReadPosRankSum=-1.707;VQSLOD=2.1583;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:79.69:0,80,608	0/1:10,1:14:5.47:5,0,126	0/1:25,0:18:2.62:3,0,88	0/1:20,0:13:4.30:4,0,34	0/0:31,1:34:59.34:0,59,611	0/0:15,1:17:10.22:0,10,243	0/0:16,0:17:35.89:0,36,287	0/0:28,0:29:54.19:0,54,420	0/0:16,0:19:47.93:0,48,343	1/1:4,23:27:45.88:634,46,0	1/1:6,14:20:21.73:370,22,0	0/0:22,0:22:32.99:0,33,394	0/0:21,1:22:23.33:0,23,363	0/0:18,0:18:47.75:0,48,365	0/0:22,1:23:26.32:0,26,385	0/0:18,0:18:47.78:0,48,371	0/0:32,0:32:74.62:0,75,577	0/0:9,0:9:4.07:0,4,13	0/0:14,1:16:1.41:0,1,184	0/0:22,0:24:68.87:0,69,504	0/0:10,0:13:22:0,22,150	0/0:26,0:26:42.76:0,43,503	0/0:18,0:18:41.82:0,42,325	0/0:12,0:14:34.91:0,35,261	0/1:9,15:24:17.09:296,0,17	0/0:34,0:35:85.67:0,86,656	0/0:27,1:34:42.23:0,42,446	0/0:14,0:15:29.79:0,30,217
chr10	73674960	.	G	GA	1885.61	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.738;DP=533;FS=1.090;HRun=7;HaplotypeScore=48.2358;InbreedingCoeff=0.9914;MQ=86.80;MQ0=0;MQRankSum=-3.203;QD=29.46;ReadPosRankSum=-0.809;VQSLOD=3.7133;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.08:0,51,492	0/0:11,0:11:24.03:0,24,232	0/0:18,0:18:41.91:0,42,379	0/0:17,0:17:39:0,39,365	0/0:28,0:28:84.14:0,84,811	0/0:30,0:30:78.12:0,78,753	0/0:14,0:14:42.07:0,42,406	0/0:18,0:18:42.07:0,42,406	0/0:17,0:17:51.08:0,51,492	1/1:2,27:29:81.20:941,81,0	1/1:2,18:20:51.16:616,51,0	0/0:16,0:16:45.07:0,45,434	0/0:15,0:15:42.05:0,42,399	0/0:14,0:14:39.06:0,39,377	0/0:26,0:26:78.13:0,78,753	0/0:15,0:15:39.06:0,39,377	0/0:10,0:10:27.01:0,27,253	0/0:15,0:15:36.05:0,36,347	0/0:16,0:16:39.06:0,39,376	0/0:33,0:33:90.14:0,90,869	0/0:20,0:20:48.07:0,48,464	0/0:25,0:25:69.10:0,69,661	0/0:26,0:26:69.11:0,69,666	0/0:11,0:11:33.05:0,33,319	1/1:0,15:15:39.12:471,39,0	0/0:19,1:20:20.85:0,21,485	0/0:30,0:30:84.13:0,84,811	0/0:6,0:6:15.02:0,15,145
chr10	73675982	.	TAC	T	1454.82	PASS	AB=0.883;AC=22;AF=0.423;AN=52;BaseQRankSum=7.086;DP=593;FS=22.671;HRun=0;HaplotypeScore=91.2878;InbreedingCoeff=0.1143;MQ=59.54;MQ0=12;MQRankSum=0.760;QD=4.13;ReadPosRankSum=-1.087;VQSLOD=0.8874;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:40:6.01:0,6,70	0/0:13,0:13:18.06:0,18,267	./.	./.	0/1:19,1:21:49.58:50,0,227	0/1:22,4:26:74.80:75,0,177	0/1:22,1:25:40.23:40,0,140	0/0:20,0:20:6.85:0,7,47	0/1:18,2:20:3.01:3,0,368	0/0:21,0:19:24.07:0,24,290	0/0:15,0:15:3.01:0,3,44	1/1:4,6:13:23.73:224,24,0	1/1:13,7:20:23.87:252,24,0	0/0:10,0:10:17.27:0,17,215	0/1:22,1:23:6.17:6,0,305	0/1:26,2:28:14.78:15,0,596	0/1:19,9:26:99:158,0,276	1/1:5,8:14:23.90:244,24,0	0/1:7,3:9:20.93:21,0,101	0/1:18,2:19:15.04:15,0,206	0/1:29,4:33:38.84:39,0,233	1/1:22,1:25:8.69:60,9,0	1/1:13,3:18:14.87:146,15,0	1/1:17,9:27:26.90:278,27,0	0/0:21,0:21:6.01:0,6,68	0/0:22,0:22:15.03:0,15,183	0/0:16,2:20:0.14:0,0,378	0/0:3,0:3:3.01:0,3,38
chr10	73676143	.	GACGACAACA	G	4455.41	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=9.909;DP=888;FS=5.600;HRun=0;HaplotypeScore=262.0869;InbreedingCoeff=0.3410;MQ=60.19;MQ0=2;MQRankSum=-10.040;QD=17.14;ReadPosRankSum=-5.437;VQSLOD=2.2077;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:45,9:51:99:1990,113,0	0/0:13,0:13:36.08:0,36,1314	0/0:28,0:17:23.94:0,24,237	0/0:28,0:24:29.81:0,30,372	0/0:22,0:22:52.10:0,52,1593	0/0:32,0:32:81.17:0,81,2371	0/0:38,0:38:99:0,105,3149	0/0:33,0:33:65.67:0,66,885	0/0:30,0:30:78:0,78,1755	0/0:24,0:23:48.71:0,49,686	0/0:8,0:8:8.93:0,9,73	0/1:46,0:46:99:522,0,153	0/1:36,0:36:84.44:454,0,84	0/0:19,0:19:51.11:0,51,1753	0/0:52,0:51:99:0,129,3792	0/0:36,0:36:96.19:0,96,3035	0/0:39,0:39:96.18:0,96,3856	0/0:21,0:21:60.09:0,60,1667	0/0:23,0:22:27.13:0,27,1366	0/0:18,0:18:42.10:0,42,1231	0/0:62,0:61:99:0,139,3569	0/1:41,0:41:89.32:794,0,89	1/1:24,0:23:3.55:356,4,0	0/1:59,0:59:39.45:340,0,39	0/0:30,0:30:21.96:0,22,430	0/0:40,0:40:99:0,100,2358	0/0:22,0:22:66.03:0,66,1894	0/0:10,0:10:27.04:0,27,976
chr10	73676155	.	GACA	G	270.28	PASS	AB=0.988;AC=6;AF=0.111;AN=54;BaseQRankSum=7.593;DP=892;FS=21.454;HRun=0;HaplotypeScore=173.2626;InbreedingCoeff=0.1786;MQ=53.54;MQ0=11;MQRankSum=-1.408;QD=1.69;ReadPosRankSum=1.456;VQSLOD=1.1474;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:60,0:57:99:210,0,358	0/0:13,0:13:33.11:0,33,642	./.	0/0:24,0:19:3.01:0,3,48	0/0:22,0:22:9.06:0,9,872	0/0:29,0:29:56.23:0,56,1221	0/0:41,0:41:93.31:0,93,1799	0/0:37,0:34:12.08:0,12,841	0/0:32,0:32:22.87:0,23,968	0/1:25,0:19:75:75,0,172	1/1:5,0:5:8.72:58,9,0	0/0:47,0:46:79.49:0,79,866	0/0:32,0:32:52.26:0,52,492	0/0:22,0:21:54.17:0,54,1023	0/0:49,2:50:69.16:0,69,1938	0/0:36,0:36:81.26:0,81,1527	0/0:35,0:35:93.30:0,93,1773	0/0:27,1:28:24.09:0,24,1128	0/0:26,0:23:50.38:0,50,860	0/0:20,0:20:42.13:0,42,752	0/0:70,0:69:99:0,129,2395	0/0:34,0:34:65.45:0,65,581	0/0:25,0:22:23.93:0,24,191	0/0:54,0:54:18.74:0,19,244	0/1:32,0:32:34.21:34,0,131	0/1:36,2:38:16.97:17,0,954	0/0:28,0:27:69.15:0,69,1121	0/0:10,0:10:27.07:0,27,491
chr10	73676176	.	AACAACG	A	1486.65	PASS	AB=1.000;AC=10;AF=0.185;AN=54;BaseQRankSum=8.506;DP=924;FS=17.017;HRun=0;HaplotypeScore=223.1332;InbreedingCoeff=0.4990;MQ=51.70;MQ0=23;MQRankSum=-4.041;QD=6.14;ReadPosRankSum=-0.546;VQSLOD=1.0406;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:54,0:51:83.59:84,0,523	0/0:14,0:14:38.35:0,38,786	./.	0/0:27,0:9:20.70:0,21,179	0/0:28,0:28:69.96:0,70,1506	0/0:25,0:25:60.07:0,60,1551	0/0:41,0:41:99:0,111,2241	0/0:42,0:39:99:0,107,1357	0/0:34,0:34:80.83:0,81,1378	1/1:25,3:22:59.96:812,60,0	1/1:5,1:6:12.03:223,12,0	0/1:46,0:45:11.78:12,0,653	0/0:33,0:33:37.22:0,37,444	0/0:27,0:26:68.76:0,69,1478	0/0:51,0:50:99:0,134,2819	0/0:39,0:39:99:0,101,1755	0/0:43,0:43:99:0,125,2506	0/0:30,0:30:49.72:0,50,1579	0/0:27,0:22:42.06:0,42,987	0/0:22,0:22:50.85:0,51,1059	0/0:76,0:76:99:0,174,3426	0/0:29,0:29:11.97:0,12,302	0/1:19,0:16:48.25:48,0,102	0/1:54,0:54:24.11:24,0,533	1/1:3,32:35:27.08:443,27,0	0/0:24,0:24:54.07:0,54,1184	0/0:32,0:31:78.96:0,79,1744	0/0:15,0:15:38.84:0,39,774
chr10	73676266	.	AACGACAACT	A	4645.71	PASS	AB=0.969;AC=12;AF=0.214;AN=56;BaseQRankSum=12.212;DP=934;FS=5.899;HRun=0;HaplotypeScore=263.4498;InbreedingCoeff=0.1368;MQ=53.69;MQ0=12;MQRankSum=-3.476;QD=14.61;ReadPosRankSum=-1.235;VQSLOD=3.1669;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:63,0:63:99:453,0,354	0/0:16,0:16:48.14:0,48,1295	0/0:45,0:19:45.53:0,46,830	0/0:44,0:25:67.58:0,68,1124	0/0:18,0:18:51.13:0,51,1384	0/0:20,0:20:57.20:0,57,1856	0/0:28,0:28:78.24:0,78,2048	0/0:40,0:40:99:0,114,2138	0/0:41,0:41:99:0,117,3765	1/1:15,1:16:12.52:735,13,0	1/1:14,2:15:33.22:578,33,0	0/1:49,0:49:99:746,0,421	0/1:40,0:40:98.43:330,0,98	0/0:28,0:28:81.07:0,81,1960	0/0:41,0:41:99:0,120,3494	0/0:31,0:31:61.55:0,62,2839	0/0:50,0:50:99:0,138,4342	0/1:21,0:21:99:176,0,120	0/0:22,0:20:57.15:0,57,1281	0/0:24,0:24:72.16:0,72,2098	0/0:96,0:96:99:0,267,7639	0/1:20,0:20:99:166,0,224	0/1:23,0:23:99:143,0,284	0/1:52,0:52:99:540,0,455	0/1:12,6:18:26.29:779,0,26	0/0:36,0:36:8.55:0,9,3145	0/0:24,0:24:72.23:0,72,2251	0/0:12,0:12:36.12:0,36,1215
chr10	73676275	.	T	TACA	8328.33	PASS	AB=0.884;AC=18;AF=0.321;AN=56;BaseQRankSum=0.953;DP=957;FS=8.321;HRun=0;HaplotypeScore=158.8071;InbreedingCoeff=0.8360;MQ=54.58;MQ0=12;MQRankSum=-2.068;QD=24.57;ReadPosRankSum=1.207;VQSLOD=4.4791;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,42:70:51.66:1121,52,0	0/0:15,0:15:27.06:0,27,380	0/0:51,0:27:66.02:0,66,808	0/0:52,0:33:42.60:0,43,709	0/0:20,0:20:57.14:0,57,770	0/0:21,0:21:51.14:0,51,717	0/0:26,0:26:57.15:0,57,806	0/0:40,0:40:90.22:0,90,1277	0/0:40,0:40:96.31:0,96,1403	1/1:7,8:15:27.09:545,27,0	1/1:4,11:15:30.06:553,30,0	1/1:23,26:49:99:1927,110,0	1/1:7,31:39:63.19:1197,63,0	0/0:28,0:28:66.17:0,66,936	0/0:40,0:40:99:0,102,1520	0/0:33,0:33:54.13:0,54,1077	0/0:50,0:50:99:0,102,1602	0/0:16,0:22:35.15:0,35,231	0/0:21,0:20:42.14:0,42,624	0/0:22,0:22:51.17:0,51,759	0/0:96,0:96:99:0,225,3120	1/1:8,12:23:16.33:330,16,0	1/1:14,10:24:42.46:814,42,0	1/1:31,16:47:11.32:1348,11,0	0/1:14,4:18:9.69:463,0,10	0/1:36,2:38:31.01:31,0,1188	0/0:27,0:27:60.13:0,60,832	0/0:13,0:13:24.05:0,24,323
chr10	73679508	.	A	AATAC	3796.86	PASS	AB=0.870;AC=21;AF=0.404;AN=52;BaseQRankSum=4.761;DP=652;FS=2.287;HRun=0;HaplotypeScore=144.8774;InbreedingCoeff=0.6618;MQ=70.18;MQ0=4;MQRankSum=0.556;QD=11.07;ReadPosRankSum=-1.966;VQSLOD=3.0887;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,4:41:58.37:535,0,58	0/0:7,0:7:18.06:0,18,276	./.	./.	0/0:29,0:28:45.14:0,45,666	1/1:17,14:30:27.09:630,27,0	1/1:18,0:18:6.02:106,6,0	0/1:39,0:37:0:0,0,0	0/0:15,0:15:17.93:0,18,245	1/1:30,0:29:26.30:75,26,0	1/1:24,0:24:7.43:56,7,0	1/1:12,7:20:39.13:905,39,0	1/1:18,1:24:35.76:559,36,0	0/0:16,0:16:30.08:0,30,437	0/0:16,0:16:27.09:0,27,414	0/0:20,0:20:21.07:0,21,322	0/0:20,0:20:30.06:0,30,414	0/1:15,0:15:21.88:34,0,22	0/0:22,0:22:18.03:0,18,218	0/0:30,0:30:66.16:0,66,983	0/0:30,0:33:42.50:0,43,550	0/1:19,7:26:9.83:719,0,10	0/1:11,0:24:0:0,0,0	1/1:14,1:17:6:94,6,0	1/1:34,0:34:29.29:83,29,0	0/0:23,0:23:29.22:0,29,481	0/0:33,0:33:63.20:0,63,943	0/0:9,0:10:18.03:0,18,213
chr10	73679544	.	CATACATACAT	C	425.79	PASS	AB=0.800;AC=2;AF=0.036;AN=56;BaseQRankSum=4.741;DP=614;FS=35.158;HRun=0;HaplotypeScore=195.6067;InbreedingCoeff=-0.0449;MQ=52.76;MQ0=6;MQRankSum=-4.398;QD=9.26;ReadPosRankSum=-1.871;VQSLOD=1.3508;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:52.85:0,53,1854	0/0:13,0:13:39.13:0,39,1416	0/0:13,0:4:12:0,12,137	0/0:8,0:3:8.24:0,8,83	0/0:23,0:23:69.23:0,69,2700	0/0:30,0:29:60.18:0,60,1858	0/0:11,0:11:24.05:0,24,472	0/0:38,0:36:99:0,105,1454	0/0:15,0:15:39.13:0,39,1268	0/1:37,0:33:99:419,0,2037	0/0:33,0:31:57.16:0,57,2092	0/0:23,0:23:54.17:0,54,1896	0/0:27,0:27:21.27:0,21,1178	0/0:14,0:14:39.13:0,39,1677	0/0:14,0:14:39.13:0,39,1735	0/0:14,0:14:42.12:0,42,1473	0/0:25,0:25:58.32:0,58,2042	0/1:3,6:9:37.79:96,0,38	0/0:19,0:18:52.70:0,53,1205	0/0:29,0:28:81.26:0,81,3875	0/0:22,0:22:57.19:0,57,2211	0/0:19,0:19:48.12:0,48,1623	0/0:20,0:20:6.02:0,6,78	0/0:15,0:15:24.06:0,24,541	0/0:41,0:40:20.58:0,21,2215	0/0:19,0:19:57.19:0,57,2115	0/0:32,0:31:93.32:0,93,4064	0/0:13,0:13:39.08:0,39,1098
chr10	73679552	.	CAT	C	492.13	PASS	AB=0.745;AC=3;AF=0.054;AN=56;BaseQRankSum=5.364;DP=616;FS=38.082;HRun=0;HaplotypeScore=117.1638;InbreedingCoeff=-0.0612;MQ=52.00;MQ0=7;MQRankSum=-3.781;QD=5.79;ReadPosRankSum=0.609;VQSLOD=1.2956;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:42.07:0,42,582	0/0:15,0:15:45.15:0,45,727	0/0:18,0:6:8.11:0,8,150	0/0:13,0:3:8.24:0,8,83	0/0:25,0:25:64.22:0,64,1128	0/0:33,0:32:66.20:0,66,870	0/0:7,0:7:15.05:0,15,209	0/0:32,0:30:81.03:0,81,972	0/0:14,0:14:30.06:0,30,452	0/1:20,18:34:99:505,0,256	0/0:19,12:29:46.10:0,46,311	0/0:22,0:22:51.17:0,51,695	0/0:29,0:29:50.18:0,50,551	0/0:15,0:15:42.08:0,42,667	0/0:12,0:12:36.12:0,36,655	0/0:12,0:12:36.12:0,36,600	0/0:28,0:28:63.69:0,64,974	0/1:8,1:9:20.28:20,0,20	0/0:18,0:17:46.01:0,46,606	0/0:32,0:31:87.30:0,87,1582	0/0:21,0:21:41.05:0,41,855	0/0:20,0:20:48.12:0,48,621	0/0:19,0:19:6.02:0,6,78	0/0:15,0:15:21.07:0,21,293	0/1:18,20:37:66.15:66,0,259	0/0:18,1:19:28.29:0,28,802	0/0:35,0:34:99:0,99,1689	0/0:12,0:12:27.88:0,28,461
chr10	73679554	.	T	TAC	3527.83	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=10.246;DP=617;FS=5.013;HRun=0;HaplotypeScore=113.6800;InbreedingCoeff=0.2780;MQ=51.95;MQ0=5;MQRankSum=-1.302;QD=13.83;ReadPosRankSum=2.420;VQSLOD=3.3238;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:42.72:43,0,132	0/0:15,0:15:45.14:0,45,577	0/0:18,0:6:8.11:0,8,150	0/0:14,0:4:8.71:0,9,84	0/0:26,0:26:55.23:0,55,791	0/1:32,0:31:73.83:74,0,404	0/1:8,0:8:14.95:15,0,133	0/0:32,0:32:75.22:0,75,947	0/0:11,0:11:24.08:0,24,312	1/1:25,13:34:87.23:1358,87,0	1/1:19,14:32:48.16:812,48,0	0/1:22,0:22:99:107,0,108	0/1:27,0:28:70.88:71,0,159	0/0:15,0:15:36.09:0,36,450	0/0:12,0:12:36.12:0,36,468	0/0:12,0:12:36.12:0,36,468	0/0:28,0:28:60.19:0,60,763	0/0:9,0:9:3.46:0,3,25	0/0:18,0:17:36.11:0,36,478	0/0:32,0:31:86.09:0,86,1097	0/0:21,0:21:51.11:0,51,618	0/1:20,0:20:99:110,0,99	0/0:18,0:18:6.02:0,6,90	0/0:14,0:14:8.67:0,9,216	1/1:24,14:37:56.75:938,57,0	0/0:20,0:20:0.31:0,0,561	0/0:35,0:34:93.30:0,93,1210	0/0:12,0:12:36.04:0,36,406
chr10	73679591	.	GTA	G	2281.72	PASS	AB=0.822;AC=32;AF=0.593;AN=54;BaseQRankSum=8.352;DP=541;FS=1.577;HRun=0;HaplotypeScore=107.1456;InbreedingCoeff=-0.2353;MQ=54.44;MQ0=9;MQRankSum=-0.895;QD=4.48;ReadPosRankSum=1.704;VQSLOD=2.4641;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:29:0:0,0,0	0/1:9,3:12:80.14:80,0,237	./.	0/1:33,0:6:0:0,0,0	0/1:19,4:23:65.12:65,0,442	0/1:21,2:22:26.38:26,0,512	0/0:4,0:4:3.01:0,3,46	0/1:30,0:30:16.98:17,0,621	1/1:2,7:10:15.05:179,15,0	1/1:11,2:32:63.79:351,64,0	1/1:13,2:30:2.84:14,3,0	1/1:5,14:19:27.08:322,27,0	0/1:6,8:13:0.43:194,0,0	0/1:9,3:12:50.40:50,0,216	0/1:6,1:7:26.71:27,0,86	0/1:10,2:12:14.66:15,0,238	0/1:29,3:33:66.14:66,0,685	0/1:7,0:11:1.35:36,0,1	0/1:14,2:17:75.95:76,0,273	0/1:19,3:22:44.43:44,0,305	0/0:9,0:9:9:0,9,96	1/1:2,6:10:17.89:193,18,0	1/1:7,3:12:20.73:205,21,0	1/1:3,12:15:21.06:250,21,0	0/1:13,1:36:0.03:0,0,0	0/1:11,4:15:67.15:67,0,432	0/1:27,3:30:80.22:80,0,744	0/1:11,3:14:71.80:72,0,292
chr10	73683199	.	TAGG	T	1948.96	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.261;DP=716;FS=11.028;HRun=0;HaplotypeScore=105.6828;InbreedingCoeff=0.9988;MQ=90.41;MQ0=0;MQRankSum=-5.034;QD=44.29;ReadPosRankSum=0.331;VQSLOD=5.0630;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:50:99:0,154,3641	0/0:9,0:9:27.09:0,27,637	0/0:34,0:34:99:0,102,2328	0/0:26,0:26:76.81:0,77,1730	0/0:26,0:26:78.27:0,78,1809	0/0:16,0:16:48.16:0,48,1183	0/0:20,0:20:60.21:0,60,1473	0/0:34,0:34:96.30:0,96,2163	0/0:21,0:21:63.20:0,63,1487	1/1:1,13:14:42.11:664,42,0	1/1:0,8:8:24.08:423,24,0	0/0:26,0:26:78.27:0,78,1900	0/0:29,0:29:87.28:0,87,2089	0/0:37,0:37:99:0,111,2720	0/0:34,0:34:99:0,102,2419	0/0:28,0:28:84.29:0,84,2046	0/0:34,0:34:99:0,102,2490	0/0:14,0:14:42.14:0,42,1010	0/0:28,0:28:84.28:0,84,1972	0/0:18,0:18:54.19:0,54,1290	0/0:47,0:47:99:0,135,3251	0/0:19,0:19:57.19:0,57,1362	0/0:17,0:17:51.14:0,51,1158	0/0:33,0:33:99:0,99,2382	1/1:0,22:22:57.20:1005,57,0	0/0:32,1:33:43.38:0,43,2150	0/0:27,0:27:81.28:0,81,1932	0/0:11,0:11:33.11:0,33,786
chr10	73684150	.	GGCTGGGAGAGCCTTA	G	751.83	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.425;DP=680;FS=0.000;HRun=0;HaplotypeScore=269.0559;InbreedingCoeff=0.9957;MQ=84.55;MQ0=0;MQRankSum=-4.504;QD=68.35;ReadPosRankSum=1.340;VQSLOD=3.0036;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,157,8312	0/0:12,0:12:36.12:0,36,2379	0/0:21,0:21:63.22:0,63,3720	0/0:27,0:28:77.41:0,77,4875	0/0:22,0:22:54.66:0,55,3253	0/0:20,0:20:57.20:0,57,2011	0/0:22,0:22:66.23:0,66,4154	0/0:26,0:26:75.26:0,75,4327	0/0:17,0:17:51.16:0,51,3254	0/0:30,0:30:87.29:0,87,4972	0/0:21,0:21:60.17:0,60,3457	0/0:30,0:30:87.30:0,87,6049	0/0:21,0:21:63.20:0,63,4290	0/0:22,0:22:63.22:0,63,4353	0/0:31,0:31:87.28:0,87,5715	0/0:16,0:16:45.15:0,45,3213	0/0:29,0:29:84.29:0,84,5815	1/1:2,9:11:21.07:844,21,0	0/0:17,0:17:48.16:0,48,2876	0/0:21,0:21:60.21:0,60,3511	0/0:41,0:41:99:0,108,6103	0/0:19,0:19:54.17:0,54,3659	0/0:18,0:18:54.19:0,54,3569	0/0:28,0:28:78.27:0,78,5236	0/0:25,0:25:75.26:0,75,3251	0/0:26,0:26:78.27:0,78,4069	0/0:39,0:38:99:0,111,7246	0/0:13,0:13:36.12:0,36,2453
chr10	73686821	.	GGAGAGAGAGAGAGA	G	382.97	PASS	AB=1.000;AC=9;AF=0.173;AN=52;BaseQRankSum=3.091;DP=457;FS=0.000;HRun=0;HaplotypeScore=160.8294;InbreedingCoeff=0.2961;MQ=74.21;MQ0=26;MQRankSum=1.359;QD=3.99;ReadPosRankSum=0.583;VQSLOD=2.5430;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:20:9.74:10,0,187	0/0:4,0:4:3.01:0,3,48	./.	0/0:44,0:23:0.94:0,1,2	0/0:18,0:18:12.04:0,12,335	0/0:20,0:18:30.09:0,30,1138	0/0:12,0:11:2.81:0,3,57	./.	0/0:15,0:13:24.08:0,24,1057	0/1:16,0:16:18.93:69,0,19	0/0:7,1:10:0.47:0,0,1	0/0:10,0:8:0.98:0,1,19	1/1:6,3:9:3.48:104,3,0	0/0:14,0:14:30.97:0,31,1111	0/0:11,0:10:9.03:0,9,279	0/0:7,0:7:15.50:0,16,636	0/0:27,0:25:36.12:0,36,1556	0/0:9,0:7:3.01:0,3,66	0/0:16,0:15:6.91:0,7,322	0/0:18,0:18:8.82:0,9,279	0/0:22,0:21:30.10:0,30,1445	0/0:7,4:14:0.47:0,0,1	1/1:15,0:17:3.01:69,3,0	0/1:15,0:14:87.39:87,0,95	1/1:14,0:13:6.02:169,6,0	0/0:20,0:19:30.09:0,30,1459	0/0:10,0:10:12.04:0,12,640	0/0:16,0:14:9.03:0,9,530
chr10	73686902	.	G	GTATGTA	1513.47	PASS	AB=0.822;AC=7;AF=0.130;AN=54;BaseQRankSum=1.289;DP=635;FS=18.163;HRun=0;HaplotypeScore=133.6372;InbreedingCoeff=0.3394;MQ=50.28;MQ0=53;MQRankSum=-1.103;QD=9.23;ReadPosRankSum=1.870;VQSLOD=1.4086;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:27:99:162,0,179	0/0:7,0:7:18:0,18,251	0/0:14,0:3:2.97:0,3,20	./.	0/0:30,0:27:63.18:0,63,1296	0/0:21,0:20:42.14:0,42,939	0/0:40,0:36:90.20:0,90,1815	0/0:27,0:26:69.07:0,69,1011	0/0:19,0:15:38.69:0,39,760	1/1:6,22:33:8.44:1416,8,0	0/1:5,12:18:0:0,0,0	0/0:20,0:18:26.28:0,26,290	0/0:19,0:17:44.33:0,44,431	0/0:19,0:19:42.13:0,42,909	0/0:15,0:14:30.10:0,30,635	0/0:14,0:13:30.08:0,30,521	0/0:37,0:32:87.26:0,87,1754	0/0:14,0:10:26.96:0,27,405	0/0:17,0:15:41.72:0,42,720	0/0:14,0:14:35.86:0,36,781	0/0:51,0:42:69.63:0,70,1370	0/0:23,0:23:26.64:0,27,273	0/0:13,0:12:20.85:0,21,317	0/1:26,0:22:23.13:23,0,218	0/1:4,13:17:0:0,0,0	0/1:34,0:31:27.13:27,0,1299	0/0:24,0:19:57.18:0,57,1170	0/0:26,0:20:39.10:0,39,749
chr10	73693318	.	TG	T	826.91	PASS	AC=16;AF=1.000;AN=16;DP=200;FS=0.000;HRun=4;HaplotypeScore=10.8216;MQ=14.34;MQ0=88;QD=8.52;VQSLOD=-0.1021;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,1:1:3.01:36,3,0	./.	./.	1/1:11,2:4:3.01:36,3,0	./.	./.	./.	./.	1/1:12,7:8:18.05:216,18,0	1/1:11,3:4:6.02:72,6,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:7,9:10:21.06:252,21,0	./.	1/1:4,2:4:6.02:72,6,0	1/1:12,1:4:3.01:36,3,0	./.	1/1:7,5:7:15.04:179,15,0	./.	./.	./.
chr10	73693322	.	GT	G	410.81	PASS	AC=16;AF=1.000;AN=16;DP=115;FS=0.000;HRun=1;HaplotypeScore=14.8601;MQ=16.37;MQ0=60;QD=8.56;VQSLOD=0.7300;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:4,0:1:2.94:18,3,0	./.	./.	1/1:3,1:3:2.97:20,3,0	./.	./.	./.	./.	1/1:9,0:7:17.43:97,17,0	1/1:4,0:3:5.96:43,6,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:10,0:8:20.62:130,21,0	./.	1/1:4,1:3:5.98:51,6,0	1/1:3,1:2:2.98:22,3,0	./.	1/1:7,1:6:14.77:100,15,0	./.	./.	./.
chr10	73698171	.	AGTGTGTGTGTGTGT	A	1203.98	PASS	AB=0.835;AC=10;AF=0.185;AN=54;BaseQRankSum=5.547;DP=488;FS=13.940;HRun=0;HaplotypeScore=175.5683;InbreedingCoeff=0.5495;MQ=62.44;MQ0=25;MQRankSum=-5.502;QD=12.67;ReadPosRankSum=-0.258;VQSLOD=1.9977;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:14.54:0,15,244	0/0:6,0:6:18.06:0,18,914	0/0:35,0:17:3.90:0,4,74	0/0:34,0:15:6.02:0,6,87	0/0:11,0:13:25.95:0,26,1254	0/0:19,0:19:36.12:0,36,1731	0/0:21,0:23:36.05:0,36,1757	0/0:17,0:15:17.55:0,18,582	0/0:14,0:13:24.08:0,24,1239	0/1:17,0:20:34.56:35,0,247	0/0:9,0:14:2.22:0,2,7	1/1:12,1:14:6.02:232,6,0	1/1:6,7:12:15.05:586,15,0	0/0:10,0:12:30.09:0,30,1538	0/0:16,0:20:24.55:0,25,1225	0/0:19,0:19:30.10:0,30,1802	0/0:17,0:20:27.09:0,27,1056	0/0:13,0:16:27.15:0,27,1126	0/0:13,0:12:11.25:0,11,222	0/0:6,0:7:5.96:0,6,261	0/0:29,0:28:27.09:0,27,1380	1/1:8,5:12:3.01:117,3,0	1/1:11,8:17:9.03:324,9,0	./.	0/1:11,0:16:29.41:56,0,29	0/0:11,0:11:20.56:0,21,589	0/0:12,0:13:30.08:0,30,1429	0/0:6,0:10:18.06:0,18,1074
chr10	73698776	.	A	AT	375.60	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.354;DP=533;FS=5.956;HRun=10;HaplotypeScore=56.0864;InbreedingCoeff=0.8550;MQ=76.21;MQ0=0;MQRankSum=-0.885;QD=15.65;ReadPosRankSum=0.274;VQSLOD=3.7848;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:27:32.87:0,33,466	0/0:9,0:9:20.97:0,21,172	0/0:14,0:16:27.72:0,28,198	0/0:10,0:9:19.56:0,20,123	0/0:15,1:16:9.95:0,10,288	0/0:26,0:26:70.38:0,70,589	0/0:15,1:17:12.01:0,12,294	0/0:29,0:29:62.90:0,63,517	0/0:17,0:18:43.98:0,44,351	0/0:18,0:18:38.92:0,39,317	0/0:18,0:20:49.96:0,50,399	0/0:13,0:13:29.96:0,30,246	0/0:22,1:24:8.87:0,9,258	0/0:21,0:21:50.92:0,51,418	0/0:27,0:28:70.93:0,71,572	0/0:11,0:11:29.96:0,30,246	0/0:30,0:29:71.89:0,72,591	1/1:5,19:24:45.09:470,45,0	0/0:28,0:29:27.99:0,28,370	0/0:7,0:7:14.97:0,15,123	0/0:19,0:19:41.90:0,42,342	0/0:15,0:15:38.95:0,39,320	0/0:19,0:19:44.94:0,45,369	0/0:13,0:13:32.94:0,33,271	0/0:15,0:15:38.95:0,39,320	0/0:18,0:18:44.07:0,44,366	0/0:26,0:26:71.89:0,72,588	0/0:14,0:14:35.96:0,36,296
chr10	73699356	.	TTGTG	T	501.06	PASS	AB=0.946;AC=24;AF=0.480;AN=50;BaseQRankSum=5.263;DP=460;FS=5.177;HRun=0;HaplotypeScore=85.2946;InbreedingCoeff=0.1575;MQ=55.65;MQ0=16;MQRankSum=-3.748;QD=1.84;ReadPosRankSum=1.737;VQSLOD=0.5398;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:28:9.01:82,9,0	0/0:7,0:7:11.78:0,12,195	./.	./.	0/0:12,0:12:8.96:0,9,107	0/0:13,0:12:9.01:0,9,154	0/1:17,0:17:15.44:15,0,147	0/0:16,0:16:2.98:0,3,21	0/1:10,1:11:28.42:28,0,257	1/1:26,0:26:11.74:111,12,0	1/1:10,0:10:3:28,3,0	1/1:9,6:16:2.73:46,3,0	1/1:6,6:13:6.02:92,6,0	0/0:14,0:14:8.56:0,9,162	0/0:12,0:12:13.86:0,14,283	0/1:9,0:8:33.01:33,0,86	0/0:27,0:26:25.35:0,25,435	0/1:21,4:25:31.16:31,0,234	./.	0/1:13,1:14:31.16:31,0,239	0/1:33,0:30:10.90:11,0,510	0/1:5,1:3:0:0,0,0	1/1:9,0:10:3.01:44,3,0	1/1:12,5:17:1.11:3,1,0	1/1:14,0:14:3:28,3,0	0/0:11,0:12:16.56:0,17,212	0/1:22,0:22:71.83:72,0,247	0/0:6,0:6:3.01:0,3,70
chr10	73699387	.	TGTGTGTGTGTGTGTGTGTGC	T	1224.32	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=5.432;DP=492;FS=0.879;HRun=0;HaplotypeScore=201.6247;InbreedingCoeff=0.7765;MQ=48.84;MQ0=27;MQRankSum=1.841;QD=29.86;ReadPosRankSum=-1.522;VQSLOD=2.4847;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:44.85:0,45,1214	0/0:11,0:11:18.53:0,19,1387	./.	0/0:14,0:2:3.01:0,3,44	0/0:17,0:16:39.57:0,40,2413	0/0:13,0:12:27.09:0,27,1492	0/0:26,0:26:43.01:0,43,1983	0/0:24,0:19:54.12:0,54,1796	0/0:13,0:13:30.56:0,31,2149	1/1:6,17:22:35.44:968,35,0	1/1:4,1:5:8.91:211,9,0	0/0:25,0:25:36.98:0,37,1507	0/0:15,0:15:23.85:0,24,824	0/0:18,0:17:30.57:0,31,1915	0/0:18,0:18:14.24:0,14,2256	0/0:10,0:9:18.48:0,18,1159	0/0:34,0:33:87.61:0,88,4806	0/0:24,0:23:23.81:0,24,2654	0/0:9,0:6:13.44:0,13,525	0/0:13,0:13:30.06:0,30,1967	0/0:43,0:40:85.59:0,86,4946	0/0:10,0:7:8.95:0,9,363	0/0:8,0:8:5.84:0,6,287	0/0:25,0:25:30.15:0,30,1166	1/1:4,9:10:3.01:170,3,0	0/0:15,0:15:42.09:0,42,2369	0/0:23,0:23:39.05:0,39,3212	0/0:5,0:5:14.88:0,15,607
chr10	73699760	.	GTT	G	1721.29	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.739;DP=568;FS=0.495;HRun=12;HaplotypeScore=70.1623;InbreedingCoeff=0.9744;MQ=70.38;MQ0=0;MQRankSum=0.770;QD=22.07;ReadPosRankSum=2.622;VQSLOD=3.3695;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.65:0,55,796	0/0:8,0:8:24.08:0,24,358	0/0:9,0:8:9.03:0,9,124	0/0:11,0:11:18.03:0,18,206	0/0:29,0:33:89.23:0,89,1196	0/0:21,0:25:67.65:0,68,864	0/0:13,0:14:36.10:0,36,500	0/0:38,0:40:89.78:0,90,1285	0/0:18,0:20:45.10:0,45,597	1/1:7,24:31:72.03:713,72,0	1/1:3,25:28:66.11:671,66,0	0/0:11,0:12:36.07:0,36,495	0/0:26,0:26:68.01:0,68,948	0/0:14,0:14:36.12:0,36,538	0/0:17,0:17:44.35:0,44,669	0/0:18,0:19:56.68:0,57,812	0/0:17,0:17:42.14:0,42,620	0/0:14,0:21:48.10:0,48,626	0/0:14,0:15:39.13:0,39,581	0/0:21,0:23:59.65:0,60,801	0/0:12,0:12:36.10:0,36,497	0/0:26,0:31:76.69:0,77,1003	0/0:19,0:19:54.17:0,54,768	0/0:17,0:17:42.14:0,42,623	1/1:0,18:19:41.83:479,42,0	0/0:22,0:25:68.67:0,69,885	0/0:35,0:35:93.28:0,93,1322	0/0:7,0:7:21.07:0,21,308
chr10	73701137	.	GGT	G	386.18	PASS	AB=0.948;AC=15;AF=0.288;AN=52;BaseQRankSum=2.689;DP=666;FS=5.960;HRun=0;HaplotypeScore=91.2726;InbreedingCoeff=-0.2742;MQ=66.57;MQ0=16;MQRankSum=2.101;QD=1.20;ReadPosRankSum=0.306;VQSLOD=1.1963;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:49,0:49:6.73:7,0,407	0/1:6,0:6:53.80:54,0,75	./.	./.	0/0:23,2:24:15.05:0,15,225	0/1:17,0:17:22:22,0,42	0/1:29,0:29:10.75:11,0,228	0/0:32,0:30:11.37:0,11,140	0/1:18,0:19:47.17:133,0,47	0/1:24,0:24:13.35:13,0,70	0/0:11,0:10:3.01:0,3,36	0/0:15,0:15:4.36:0,4,33	0/0:14,0:22:2.91:0,3,26	0/1:20,4:24:0.23:0,0,313	0/0:21,0:18:27.07:0,27,367	0/1:17,0:19:4.32:4,0,283	0/1:18,1:23:40.16:40,0,129	1/1:12,0:19:14.20:70,14,0	0/1:22,0:21:30.04:35,0,30	0/0:15,0:13:3.01:0,3,44	0/0:48,8:56:0.54:0,1,301	0/0:24,0:21:24.57:0,25,203	0/0:15,0:15:5.96:0,6,46	0/0:15,0:30:11.16:0,11,76	0/0:18,0:18:11.40:0,11,119	0/1:32,3:34:60.45:60,0,128	0/1:20,0:20:51.45:51,0,166	0/1:12,3:14:26.62:27,0,106
chr10	73701178	.	G	GT	535.96	PASS	AB=0.960;AC=10;AF=0.179;AN=56;BaseQRankSum=7.230;DP=666;FS=0.000;HRun=1;HaplotypeScore=86.0766;InbreedingCoeff=0.2196;MQ=49.21;MQ0=62;MQRankSum=-3.886;QD=3.44;ReadPosRankSum=-0.804;VQSLOD=-0.3593;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:39:46.47:0,46,1167	0/0:8,0:8:23.23:0,23,253	0/0:68,0:9:27.06:0,27,334	0/0:74,0:23:42.07:0,42,533	0/0:19,0:16:30.10:0,30,405	0/0:19,0:19:32.83:0,33,412	0/0:24,0:24:26.13:0,26,765	0/0:20,0:15:41.36:0,41,543	0/0:20,0:20:48.18:0,48,505	1/1:14,1:14:16.54:393,17,0	0/0:10,0:9:3.01:0,3,35	0/1:16,1:15:63.99:64,0,193	0/0:11,0:9:3.14:0,3,60	0/0:22,0:20:45.02:0,45,589	0/0:21,0:19:48.15:0,48,629	0/0:16,0:15:36.56:0,37,469	0/0:24,0:23:48.09:0,48,594	0/1:20,0:20:0.83:1,0,316	0/0:12,0:10:30.06:0,30,357	0/0:10,0:9:24.08:0,24,320	0/0:52,1:51:99:0,105,1386	0/1:18,0:14:62.17:62,0,210	0/1:17,2:17:55.68:56,0,142	0/1:28,2:29:36.20:36,0,285	1/1:12,0:10:5.93:56,6,0	0/1:24,0:22:10.73:11,0,671	0/0:17,0:14:41.60:0,42,506	0/0:18,0:15:31.78:0,32,441
chr10	73701190	.	TG	T	210.35	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=7.283;DP=652;FS=1.875;HRun=2;HaplotypeScore=83.1433;InbreedingCoeff=0.8958;MQ=54.60;MQ0=54;MQRankSum=-6.084;QD=10.52;ReadPosRankSum=1.711;VQSLOD=1.8643;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:32:75.80:0,76,1243	0/0:9,0:9:27.09:0,27,390	0/0:89,0:20:36.92:0,37,681	0/0:88,0:30:76.94:0,77,910	0/0:17,0:15:33.09:0,33,458	0/0:16,0:16:32.96:0,33,457	0/0:22,0:22:66.18:0,66,936	0/0:20,0:18:44.47:0,44,638	0/0:17,0:17:44.88:0,45,609	1/1:8,4:11:32.54:295,33,0	./.	0/0:19,0:17:29.35:0,29,434	0/0:9,0:7:14.95:0,15,215	0/0:14,0:13:33.11:0,33,484	0/0:17,0:17:37.32:0,37,512	0/0:11,0:10:30.08:0,30,397	0/0:22,0:21:57.19:0,57,839	0/0:21,1:22:19.02:0,19,689	0/0:15,0:12:36.12:0,36,523	0/0:12,0:11:33.11:0,33,479	0/0:49,0:47:99:0,111,1581	0/0:15,1:13:36.05:0,36,479	0/0:20,0:18:10.44:0,10,249	0/0:28,2:28:25.02:0,25,490	1/1:8,0:6:5.16:26,5,0	0/0:24,0:22:21.42:0,21,749	0/0:15,0:12:36.12:0,36,526	0/0:17,0:15:42.10:0,42,563
chr10	73701193	.	TG	T	125.46	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.863;DP=646;FS=3.433;HRun=2;HaplotypeScore=82.5062;InbreedingCoeff=0.7899;MQ=55.50;MQ0=49;MQRankSum=-4.414;QD=5.45;ReadPosRankSum=1.552;VQSLOD=0.9082;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:76.18:0,76,1431	0/0:9,0:9:27.08:0,27,408	0/0:94,0:25:62.84:0,63,1004	0/0:88,0:30:77.10:0,77,1095	0/0:14,0:12:33.09:0,33,502	0/0:16,0:16:33.45:0,33,518	0/0:21,0:21:63.21:0,63,985	0/0:19,0:18:48.62:0,49,745	0/0:16,0:16:42.13:0,42,637	1/1:10,5:14:6.98:193,7,0	0/0:4,4:8:2.37:0,2,8	0/0:15,0:14:30.10:0,30,480	0/0:9,0:8:14.95:0,15,238	0/0:12,0:11:33.11:0,33,527	0/0:18,0:18:49.70:0,50,732	0/0:10,0:9:27.09:0,27,409	0/0:22,0:21:63.21:0,63,991	0/0:21,0:21:53.56:0,54,778	0/0:16,0:13:39.12:0,39,602	0/0:13,0:12:36.12:0,36,571	0/0:52,0:50:99:0,120,1832	0/0:14,0:12:36.12:0,36,566	0/0:17,0:15:17.39:0,17,287	0/0:29,0:27:35.41:0,35,573	1/1:4,4:6:5.36:33,5,0	0/0:23,2:23:13.91:0,14,871	0/0:15,0:12:36.12:0,36,575	0/0:17,0:15:42.14:0,42,661
chr10	73701195	.	TGTG	T	228.61	PASS	AB=0.839;AC=6;AF=0.107;AN=56;BaseQRankSum=7.473;DP=656;FS=1.986;HRun=0;HaplotypeScore=102.0188;InbreedingCoeff=0.5075;MQ=55.92;MQ0=48;MQRankSum=-3.184;QD=3.94;ReadPosRankSum=0.490;VQSLOD=1.4833;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:85.72:0,86,1902	0/0:8,0:8:24.05:0,24,423	0/0:97,0:28:65.82:0,66,1123	0/0:89,0:31:54.01:0,54,722	0/0:16,0:14:39.10:0,39,685	0/0:16,0:16:33.09:0,33,642	0/0:21,0:21:57.17:0,57,1149	0/0:20,0:19:51.14:0,51,1081	0/0:15,0:15:36.07:0,36,736	0/1:8,5:14:12.62:248,0,13	1/1:5,3:8:1.69:11,2,0	0/0:15,0:14:30.10:0,30,688	0/0:11,0:10:24.04:0,24,430	0/0:12,0:11:33.04:0,33,562	0/0:18,0:18:45.12:0,45,897	0/0:11,0:10:24.04:0,24,428	0/0:21,0:21:63.19:0,63,1344	0/0:21,0:21:47.69:0,48,951	0/0:17,0:15:45.06:0,45,737	0/0:14,0:13:39.13:0,39,829	0/0:50,0:48:99:0,126,2304	0/0:14,0:12:34:0,34,738	0/0:17,0:15:23.41:0,23,459	0/0:29,0:27:38.65:0,39,807	1/1:5,4:7:5.69:72,6,0	0/1:24,2:24:4.07:4,0,1032	0/0:16,0:13:39.12:0,39,824	0/0:17,0:15:39.09:0,39,739
chr10	73702103	.	C	CA	2071.01	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.639;DP=704;FS=1.876;HRun=1;HaplotypeScore=96.3120;InbreedingCoeff=0.9994;MQ=85.81;MQ0=1;MQRankSum=-1.595;QD=36.98;ReadPosRankSum=0.956;VQSLOD=3.8953;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1552	0/0:11,0:11:33.11:0,33,461	0/0:30,0:28:75.18:0,75,1017	0/0:45,0:41:99:0,101,1333	0/0:19,0:19:54.18:0,54,752	0/0:15,0:15:42.14:0,42,587	0/0:32,0:32:96.30:0,96,1325	0/0:30,0:30:87.28:0,87,1203	0/0:31,0:31:84.28:0,84,1175	1/1:2,21:23:57.15:876,57,0	1/1:1,19:20:51.17:814,51,0	0/0:37,0:37:96.32:0,96,1341	0/0:19,0:19:54.18:0,54,752	0/0:26,0:26:69.70:0,70,965	0/0:25,0:25:72.24:0,72,1007	0/0:23,0:23:66.22:0,66,923	0/0:21,0:21:63.21:0,63,881	0/0:11,0:11:27.09:0,27,374	0/0:21,0:21:63.21:0,63,868	0/0:24,0:24:72.24:0,72,1005	0/0:45,0:45:99:0,123,1696	0/0:37,0:37:97.76:0,98,1344	0/0:22,0:22:60.17:0,60,803	0/0:35,0:35:78.26:0,78,1088	1/1:0,13:13:33.01:523,33,0	0/0:18,0:18:54.17:0,54,739	0/0:20,0:20:60.20:0,60,837	0/0:13,0:13:36.12:0,36,503
chr10	73702135	.	G	GCACA	5357.43	PASS	AB=0.793;AC=18;AF=0.321;AN=56;BaseQRankSum=-1.812;DP=824;FS=5.885;HRun=0;HaplotypeScore=162.8350;InbreedingCoeff=0.7695;MQ=57.70;MQ0=8;MQRankSum=0.051;QD=19.20;ReadPosRankSum=0.966;VQSLOD=3.9460;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:42:65.99:0,66,1011	0/0:13,0:14:21.05:0,21,292	0/0:43,0:15:8.76:0,9,93	0/0:65,0:31:6.01:0,6,96	0/0:18,0:19:51.13:0,51,738	0/0:21,0:23:51.14:0,51,752	0/0:27,0:29:45.08:0,45,628	0/0:36,0:37:45.12:0,45,649	0/0:31,0:33:61.74:0,62,918	1/1:35,0:37:60.50:564,60,0	1/1:21,0:23:8.94:97,9,0	0/1:18,25:45:29.78:1315,0,30	1/1:8,9:18:29.84:661,30,0	0/0:26,0:31:60.13:0,60,805	0/0:21,0:24:50.90:0,51,776	0/0:27,0:28:63.19:0,63,964	0/0:24,0:25:57.17:0,57,863	1/1:17,0:17:4.60:192,5,0	0/0:20,0:22:21.07:0,21,284	0/0:17,0:18:29.92:0,30,460	0/0:49,0:52:84.22:0,84,1245	1/1:12,21:41:44.09:812,44,0	1/1:7,5:14:11.51:169,12,0	1/1:7,30:40:65.24:1406,65,0	1/1:19,0:20:11.23:130,11,0	0/1:22,0:24:13.22:13,0,517	0/0:26,0:28:54.16:0,54,817	0/0:9,0:11:27.08:0,27,392
chr10	73703026	.	C	CTTTTTGTTTCTCTCA	7284.66	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.130;DP=479;FS=2.942;HRun=0;HaplotypeScore=193.4675;InbreedingCoeff=0.9884;MQ=92.84;MQ0=0;MQRankSum=-9.134;QD=140.09;ReadPosRankSum=-2.074;VQSLOD=4.1599;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:63.16:0,63,2282	0/0:5,0:5:15.04:0,15,538	0/0:16,0:16:30.10:0,30,1203	0/0:26,0:26:48.12:0,48,1594	0/0:10,0:10:24.08:0,24,985	0/0:16,0:16:45.15:0,45,1885	0/0:15,0:15:42.14:0,42,1691	0/0:26,0:26:63.21:0,63,2340	0/0:19,0:19:54.19:0,54,2204	1/1:12,6:18:41.82:2306,42,0	1/1:8,7:15:30.10:1810,30,0	0/0:9,0:9:21.07:0,21,787	0/0:14,0:14:39.13:0,39,1581	0/0:12,0:12:30.10:0,30,1222	0/0:20,0:20:51.17:0,51,1814	0/0:19,0:19:48.16:0,48,1751	0/0:19,0:19:45.15:0,45,1834	0/0:9,0:9:24.08:0,24,885	0/0:23,0:23:57.17:0,57,2011	0/0:10,0:10:27.09:0,27,1022	0/0:25,0:25:63.22:0,63,2442	0/0:8,0:8:21.06:0,21,790	0/0:9,0:9:24.08:0,24,878	0/0:23,0:23:54.14:0,54,2084	1/1:12,7:19:51.17:3169,51,0	0/0:22,0:22:54.17:0,54,2154	0/0:30,0:30:81.28:0,81,3268	0/0:16,0:16:48.16:0,48,1986
chr10	73703084	.	GA	G	2202.24	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.756;DP=605;FS=0.000;HRun=1;HaplotypeScore=57.0545;InbreedingCoeff=0.9998;MQ=92.77;MQ0=1;MQRankSum=-3.635;QD=36.70;ReadPosRankSum=1.751;VQSLOD=3.7766;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1692	0/0:10,0:10:30.10:0,30,480	0/0:26,0:26:78.24:0,78,1188	0/0:28,0:28:81.26:0,81,1206	0/0:28,0:28:84.29:0,84,1343	0/0:20,0:20:60.18:0,60,904	0/0:21,0:21:63.21:0,63,1007	0/0:18,0:18:54.18:0,54,854	0/0:23,0:23:69.24:0,69,1097	1/1:0,22:22:63.21:881,63,0	1/1:0,18:17:48.16:668,48,0	0/0:15,0:15:45.15:0,45,717	0/0:18,0:18:54.17:0,54,840	0/0:26,0:26:78.27:0,78,1238	0/0:20,0:20:60.20:0,60,959	0/0:27,0:27:81.28:0,81,1295	0/0:26,0:26:78.27:0,78,1236	0/0:15,0:15:42.14:0,42,671	0/0:17,0:17:51.15:0,51,772	0/0:25,0:25:75.26:0,75,1199	0/0:23,0:23:69.21:0,69,1047	0/0:16,0:16:48.16:0,48,767	0/0:16,0:16:48.16:0,48,767	0/0:28,0:28:84.29:0,84,1332	1/1:0,20:20:57.19:797,57,0	0/0:25,0:25:75.26:0,75,1200	0/0:25,0:25:75.26:0,75,1199	0/0:13,0:13:39.13:0,39,623
chr10	73703181	.	A	AT	2286.65	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.400;DP=520;FS=12.428;HRun=5;HaplotypeScore=49.3595;InbreedingCoeff=0.9932;MQ=72.58;MQ0=0;MQRankSum=-1.087;QD=33.63;ReadPosRankSum=0.414;VQSLOD=3.0433;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.14:0,54,580	0/0:11,0:11:33.08:0,33,355	0/0:12,0:12:30.07:0,30,319	0/0:9,0:9:21.03:0,21,215	0/0:24,0:24:66.16:0,66,709	0/0:20,0:20:51.13:0,51,548	0/0:9,0:9:27.07:0,27,290	0/0:31,0:31:87.21:0,87,928	0/0:21,0:21:51.12:0,51,548	1/1:3,20:23:66.21:867,66,0	1/1:4,18:22:60.18:773,60,0	0/0:8,0:8:21.05:0,21,225	0/0:17,0:17:51.10:0,51,532	0/0:14,0:14:42.11:0,42,451	0/0:13,0:13:36.09:0,36,387	0/0:13,0:13:36.09:0,36,386	0/0:26,0:26:72.18:0,72,774	0/0:17,0:17:48.12:0,48,515	0/0:25,0:25:66.16:0,66,709	0/0:34,0:34:96.22:0,96,1023	0/0:8,0:8:18.04:0,18,193	0/0:12,0:12:33.08:0,33,354	0/0:24,0:24:60.15:0,60,645	0/0:14,0:14:39.10:0,39,419	1/1:2,21:23:60.20:789,60,0	0/0:25,1:26:32.69:0,33,689	0/0:32,0:31:84.21:0,84,902	0/0:11,0:11:33.08:0,33,355
chr10	73703244	.	TA	T	1024.18	PASS	AB=0.865;AC=9;AF=0.161;AN=56;BaseQRankSum=9.130;DP=533;FS=0.477;HRun=12;HaplotypeScore=58.3756;InbreedingCoeff=0.3100;MQ=72.36;MQ0=0;MQRankSum=-0.298;QD=7.37;ReadPosRankSum=0.771;VQSLOD=1.9676;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:22:53.23:0,53,554	0/0:5,0:5:12.02:0,12,122	0/1:15,1:13:8.22:8,0,103	0/1:8,0:8:10.08:10,0,47	0/0:27,0:27:57.09:0,57,569	0/0:21,0:21:54.08:0,54,531	0/0:12,0:13:32.89:0,33,312	0/0:14,1:16:6.59:0,7,223	0/1:9,2:12:25.61:26,0,109	1/1:9,16:25:50.77:394,51,0	0/1:10,18:28:20.18:355,0,20	0/0:10,1:11:3.80:0,4,211	0/0:13,1:14:12.80:0,13,301	0/0:17,1:18:45.07:0,45,446	0/0:16,1:18:21.67:0,22,375	0/0:21,0:21:54.09:0,54,537	0/1:21,2:23:15.42:15,0,386	0/0:18,0:18:54.07:0,54,533	0/0:17,1:19:30.71:0,31,470	0/0:34,2:37:43.52:0,44,780	0/0:14,0:14:36.05:0,36,354	0/0:18,2:21:30.69:0,31,469	0/0:27,0:28:68.97:0,69,683	0/0:10,0:10:21.03:0,21,207	1/1:9,18:27:23.27:364,23,0	0/0:25,1:26:33.86:0,34,520	0/0:23,2:24:13.60:0,14,478	0/0:9,0:10:17.87:0,18,167
chr10	73704021	.	TTGTGTGTGTGTGTGTG	T	757.80	PASS	AB=0.852;AC=7;AF=0.130;AN=54;BaseQRankSum=5.696;DP=470;FS=1.194;HRun=0;HaplotypeScore=175.0251;InbreedingCoeff=0.1211;MQ=64.97;MQ0=20;MQRankSum=-5.295;QD=7.36;ReadPosRankSum=0.853;VQSLOD=2.6232;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,9:22:12.04:524,12,0	0/0:13,0:15:18.06:0,18,636	./.	0/0:23,0:14:5.23:0,5,55	0/0:19,0:19:33.11:0,33,1794	0/0:8,0:10:18.06:0,18,1031	0/0:18,0:17:20.10:0,20,1210	0/0:29,0:28:30.07:0,30,791	0/0:12,0:13:11.51:0,12,693	0/0:15,0:14:21.07:0,21,659	0/0:17,0:17:18.04:0,18,736	0/0:10,0:10:9.02:0,9,110	0/1:11,0:10:56.39:56,0,67	0/0:11,0:9:12.04:0,12,768	0/0:13,0:12:18.06:0,18,1019	0/0:8,0:8:15.05:0,15,917	0/0:24,0:26:40.69:0,41,2152	0/1:17,3:19:73.67:125,0,74	0/0:11,0:10:13.60:0,14,587	0/0:19,0:18:24.08:0,24,1439	0/0:21,0:20:11.87:0,12,676	0/1:5,0:8:38.89:94,0,39	0/1:21,0:21:30.17:30,0,377	0/1:14,0:17:59.64:60,0,106	0/0:14,0:16:24.08:0,24,1290	0/0:16,0:12:18.02:0,18,440	0/0:19,0:19:33.11:0,33,1784	0/0:15,0:13:18.06:0,18,1114
chr10	73704517	.	C	CT	1004.21	PASS	AB=0.803;AC=18;AF=0.321;AN=56;BaseQRankSum=-0.135;DP=674;FS=4.554;HRun=16;HaplotypeScore=104.6937;InbreedingCoeff=-0.1733;MQ=72.85;MQ0=8;MQRankSum=-0.394;QD=2.21;ReadPosRankSum=-2.264;VQSLOD=-0.2496;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,27:50:22.87:198,0,23	0/0:6,0:6:14.54:0,15,81	0/1:44,1:21:16.71:17,0,32	0/1:41,0:24:0.45:0,0,21	0/1:27,2:31:4.19:4,0,180	0/0:16,2:18:1.42:0,1,95	0/0:21,0:22:9.40:0,9,133	0/1:36,1:36:22.88:23,0,71	0/0:15,0:18:20.42:0,20,109	0/1:12,9:21:6.75:121,0,7	0/1:16,2:19:2.04:140,0,2	1/1:12,1:15:5.03:107,5,0	0/1:11,15:28:4.64:156,0,5	0/0:13,0:14:19.47:0,19,106	0/0:19,0:19:22.92:0,23,131	0/1:13,2:17:14.83:15,0,111	0/0:26,0:29:32.21:0,32,169	0/0:2,0:17:14.19:0,14,40	0/1:18,0:22:0.35:0,0,104	0/0:29,1:31:7.96:0,8,144	0/1:8,1:9:10.30:19,0,10	0/1:8,8:17:12.04:77,0,12	0/1:10,13:26:11.23:80,0,11	0/1:11,12:25:36.72:121,0,37	0/1:4,9:14:7.35:58,0,7	0/1:30,4:34:18.34:18,0,102	0/0:14,1:18:20.39:0,20,100	0/0:26,0:27:36.48:0,36,205
chr10	73705375	.	AG	A	1941.29	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.897;DP=632;FS=0.491;HRun=4;HaplotypeScore=66.7353;InbreedingCoeff=0.9940;MQ=72.24;MQ0=0;MQRankSum=-1.553;QD=27.34;ReadPosRankSum=0.407;VQSLOD=2.9468;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,1921	0/0:10,0:10:30.07:0,30,384	0/0:17,0:17:45.73:0,46,580	0/0:21,0:20:57.14:0,57,750	0/0:30,0:30:90.29:0,90,1240	0/0:22,0:22:66.22:0,66,923	0/0:25,0:25:72.24:0,72,1006	0/0:30,0:30:84.21:0,84,1065	0/0:20,0:20:60.19:0,60,824	1/1:4,26:30:87.25:999,87,0	1/1:0,23:23:57.17:665,57,0	0/0:16,0:16:45.15:0,45,628	0/0:12,0:12:36.09:0,36,470	0/0:21,0:21:57.19:0,57,798	0/0:24,0:24:72.24:0,72,1007	0/0:16,0:16:48.13:0,48,637	0/0:17,0:17:51.15:0,51,679	0/0:22,0:22:63.21:0,63,881	0/0:24,0:24:63.10:0,63,824	0/0:25,0:25:75.25:0,75,1049	0/0:31,0:31:87.28:0,87,1199	0/0:21,0:21:57.18:0,57,781	0/0:22,0:22:57.14:0,57,763	0/0:18,0:18:54.18:0,54,756	1/1:4,13:18:36.11:420,36,0	0/0:31,0:31:60.04:0,60,1077	0/0:34,0:34:99:0,102,1424	0/0:5,0:4:15.02:0,15,189
chr10	73706608	.	C	CT	643.85	PASS	AB=0.873;AC=22;AF=0.393;AN=56;BaseQRankSum=3.171;DP=388;FS=6.954;HRun=16;HaplotypeScore=48.7715;InbreedingCoeff=0.2778;MQ=57.46;MQ0=17;MQRankSum=-0.004;QD=3.39;ReadPosRankSum=2.132;VQSLOD=-0.6597;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:24,6:30:50.68:174,0,51	0/0:4,0:4:11.56:0,12,62	0/0:29,0:6:4.79:0,5,17	0/0:10,0:4:2.91:0,3,17	0/0:14,0:17:27.83:0,28,131	0/0:12,1:15:3.41:0,3,60	0/0:11,0:12:0.86:0,1,64	0/0:29,0:27:43.54:0,44,224	0/1:13,1:14:9.37:9,0,52	1/1:16,0:16:26.03:80,26,0	1/1:7,0:7:17.07:61,17,0	0/1:8,2:10:5.71:59,0,6	1/1:1,5:5:2.99:24,3,0	0/0:13,0:13:8.13:0,8,59	0/0:13,0:13:16.69:0,17,89	0/1:12,2:14:2.11:2,0,75	0/1:16,5:21:16.19:16,0,104	1/1:11,6:19:10.57:129,11,0	0/0:13,1:13:18.33:0,18,90	0/0:10,0:9:8.31:0,8,48	0/1:8,1:9:29.60:30,0,49	1/1:2,3:5:7.23:51,7,0	1/1:2,4:6:2.99:24,3,0	0/1:8,3:10:1.81:78,0,2	1/1:12,0:12:21.16:71,21,0	0/0:12,0:12:14.77:0,15,83	0/0:10,1:10:1.32:0,1,88	0/1:8,0:8:7.08:7,0,25
chr10	73706611	.	T	TC	859.58	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.016;DP=380;FS=7.060;HRun=0;HaplotypeScore=45.4169;InbreedingCoeff=0.8573;MQ=57.49;MQ0=17;MQRankSum=1.883;QD=25.28;ReadPosRankSum=4.736;VQSLOD=4.6358;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:69.78:0,70,564	0/0:4,0:4:12.04:0,12,159	0/0:29,0:6:11.97:0,12,114	0/0:10,0:4:6.01:0,6,57	0/0:18,0:18:42.92:0,43,472	0/0:14,0:14:35.11:0,35,334	0/0:13,0:11:32.50:0,33,315	0/0:29,0:23:69.08:0,69,776	0/0:13,0:13:34.60:0,35,353	1/1:0,15:15:45.10:479,45,0	1/1:0,7:7:21.06:228,21,0	0/0:11,0:11:20.56:0,21,183	0/0:6,0:5:1.55:0,2,4	0/0:11,0:11:32.92:0,33,323	0/0:14,0:14:36.06:0,36,393	0/0:14,0:14:34.62:0,35,376	0/0:22,0:21:39.97:0,40,461	0/0:18,0:18:30.71:0,31,241	0/0:17,0:13:35.91:0,36,351	0/0:9,0:8:20.97:0,21,216	0/0:10,0:10:17.22:0,17,212	0/0:5,0:5:11.68:0,12,65	0/0:7,0:7:10.07:0,10,70	0/0:11,0:10:18.99:0,19,128	1/1:0,12:12:27.07:294,27,0	0/0:13,0:13:38.96:0,39,395	0/0:11,0:10:28.32:0,28,331	0/0:6,0:6:14.86:0,15,148
chr10	73708337	.	C	CAGA	12538.01	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-2.771;DP=583;FS=2.800;HRun=0;HaplotypeScore=88.5902;InbreedingCoeff=0.9983;MQ=89.69;MQ0=0;MQRankSum=-5.488;QD=58.86;ReadPosRankSum=3.111;VQSLOD=7.1431;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:42.14:952,42,0	0/0:14,0:14:42.13:0,42,675	0/0:22,0:22:51.07:0,51,796	0/0:24,0:24:52.92:0,53,801	0/0:39,0:39:99:0,114,1895	0/0:29,0:29:87.30:0,87,1445	0/0:9,0:9:27.09:0,27,450	0/0:25,0:25:66.23:0,66,1096	0/0:16,0:16:48.15:0,48,774	1/1:2,21:24:69.24:1522,69,0	1/1:0,29:29:87.26:1919,87,0	1/1:1,20:21:57.20:1291,57,0	1/1:3,21:24:72.20:1581,72,0	0/0:17,0:17:48.16:0,48,799	0/0:22,0:22:57.19:0,57,946	0/0:17,0:17:48.16:0,48,800	0/0:18,0:18:53.77:0,54,851	1/1:2,10:11:30.09:634,30,0	0/0:12,0:12:30.10:0,30,478	0/0:26,0:26:75.26:0,75,1247	0/0:6,0:6:18.06:0,18,300	1/1:1,20:21:54.14:1173,54,0	1/1:3,15:18:42.14:952,42,0	1/1:1,9:10:27.09:611,27,0	1/1:1,31:33:84.29:1902,84,0	0/0:31,0:31:81.28:0,81,1350	0/0:29,0:29:84.20:0,84,1391	0/0:14,0:14:36.12:0,36,600
chr10	73709554	.	CTG	C	1130.87	PASS	AB=0.884;AC=22;AF=0.407;AN=54;BaseQRankSum=5.299;DP=523;FS=7.712;HRun=0;HaplotypeScore=81.5987;InbreedingCoeff=0.0890;MQ=61.84;MQ0=11;MQRankSum=2.341;QD=3.93;ReadPosRankSum=1.486;VQSLOD=1.5218;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:6.48:0,6,69	0/1:6,0:7:1.96:2,0,124	./.	0/0:21,0:13:0.47:0,0,1	0/1:18,5:25:77.40:77,0,272	0/1:18,4:22:36.45:36,0,330	0/1:7,1:8:12.23:12,0,229	0/0:22,0:22:8.04:0,8,76	0/1:14,2:16:30.37:30,0,391	0/0:33,0:33:39.03:0,39,405	0/1:25,0:24:0:0,0,0	1/1:11,4:15:14.87:148,15,0	1/1:7,9:16:20.89:232,21,0	0/1:14,1:16:23.35:23,0,246	0/1:13,4:18:83.48:83,0,239	0/1:11,2:13:45.49:45,0,204	0/0:32,0:32:42.14:0,42,624	0/0:13,0:12:11.99:0,12,126	0/0:21,0:20:13.28:0,13,159	0/0:16,0:18:15.03:0,15,187	0/1:21,1:22:12.16:12,0,207	1/1:6,5:12:11.86:114,12,0	1/1:13,8:21:15.04:166,15,0	1/1:4,7:14:23.56:208,24,0	0/0:21,0:21:5.99:0,6,49	0/1:15,2:15:59.62:60,0,131	0/0:15,0:15:12.04:0,12,181	0/1:18,2:20:50.26:50,0,112
chr10	73709724	.	C	CA	2626.03	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-7.009;DP=627;FS=3.491;HRun=4;HaplotypeScore=65.2017;InbreedingCoeff=0.9993;MQ=85.19;MQ0=0;MQRankSum=0.088;QD=33.24;ReadPosRankSum=2.199;VQSLOD=4.4785;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,1505	0/0:8,0:8:24.07:0,24,272	0/0:21,0:21:51.09:0,51,546	0/0:24,0:24:57.70:0,58,612	0/0:20,0:20:60.17:0,60,680	0/0:26,0:26:75.21:0,75,850	0/0:18,0:18:51.13:0,51,569	0/0:32,0:32:87.23:0,87,971	0/0:19,0:19:37.23:0,37,592	1/1:0,18:18:54.13:698,54,0	1/1:3,19:22:57.19:776,57,0	0/0:16,0:16:45.11:0,45,501	0/0:27,0:27:78.14:0,78,848	0/0:28,0:28:72.20:0,72,816	0/0:26,0:26:78.21:0,78,872	0/0:27,0:27:75.17:0,75,836	0/0:28,0:28:78.22:0,78,884	1/1:2,23:25:54.18:739,54,0	0/0:16,0:16:42.12:0,42,475	0/0:18,0:18:48.12:0,48,535	0/0:35,0:35:99:0,99,1122	0/0:16,0:16:39.09:0,39,432	0/0:13,0:13:39.11:0,39,438	0/0:25,0:25:72.16:0,72,793	1/1:0,14:14:42.14:575,42,0	0/0:21,0:21:63.18:0,63,715	0/0:26,0:26:72.19:0,72,806	0/0:11,0:11:33.09:0,33,374
chr10	73714663	.	GC	G	769.09	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.427;DP=654;FS=1.614;HRun=4;HaplotypeScore=62.6005;InbreedingCoeff=0.9994;MQ=81.39;MQ0=0;MQRankSum=-1.619;QD=32.05;ReadPosRankSum=0.480;VQSLOD=4.1117;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.24:0,72,1008	0/0:10,0:10:30.10:0,30,420	0/0:21,0:21:45.01:0,45,722	0/0:17,0:17:42.09:0,42,531	0/0:36,0:36:99:0,105,1461	0/0:20,0:19:60.19:0,60,822	0/0:16,0:16:48.16:0,48,672	0/0:26,0:26:78.25:0,78,1077	0/0:16,0:16:45.14:0,45,613	0/0:27,0:27:78.26:0,78,1083	0/0:40,0:40:99:0,108,1479	0/0:19,0:19:57.19:0,57,798	0/0:31,0:31:93.29:0,93,1284	0/0:19,0:19:57.19:0,57,794	0/0:27,0:27:81.27:0,81,1124	0/0:15,0:15:45.15:0,45,630	0/0:17,0:17:48.13:0,48,652	1/1:0,24:24:72.22:864,72,0	0/0:17,0:17:48.15:0,48,656	0/0:42,0:42:99:0,123,1698	0/0:17,0:17:48.16:0,48,672	0/0:18,0:18:54.17:0,54,737	0/0:28,0:28:84.28:0,84,1176	0/0:21,0:21:63.20:0,63,865	0/0:34,0:34:99:0,102,1427	0/0:23,0:23:69.23:0,69,966	0/0:26,0:26:78.22:0,78,1070	0/0:21,0:21:63.21:0,63,880
chr10	73715369	.	TA	T	2004.79	PASS	AB=0.522;AC=15;AF=0.268;AN=56;BaseQRankSum=10.266;DP=477;FS=1.994;HRun=10;HaplotypeScore=44.4273;InbreedingCoeff=0.9381;MQ=62.85;MQ0=0;MQRankSum=0.797;QD=19.46;ReadPosRankSum=0.688;VQSLOD=4.1780;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:57.07:0,57,583	0/0:5,0:5:12.03:0,12,133	0/0:7,0:7:15.03:0,15,158	0/0:10,0:9:16.50:0,16,215	0/0:30,1:31:73.21:0,73,839	0/0:31,0:31:90.19:0,90,975	0/0:9,0:9:20.95:0,21,215	0/0:34,0:33:75.20:0,75,829	0/0:9,0:9:21.05:0,21,225	1/1:2,19:21:56.98:492,57,0	1/1:0,10:10:29.99:260,30,0	0/1:1,11:12:0.19:227,0,0	1/1:4,16:20:44.99:391,45,0	0/0:11,0:11:33.09:0,33,365	0/0:22,0:22:60.16:0,60,664	0/0:25,0:25:69.19:0,69,763	0/0:32,0:32:89.97:0,90,967	0/0:16,0:16:42.03:0,42,440	0/0:18,0:18:45.12:0,45,498	0/0:15,0:15:39.08:0,39,415	0/0:6,0:6:18.05:0,18,199	1/1:2,5:7:14.99:130,15,0	1/1:2,11:13:32.99:287,33,0	1/1:0,7:7:21:182,21,0	1/1:0,13:13:26.99:234,27,0	0/0:26,0:26:66.12:0,66,708	0/0:24,0:24:41.89:0,42,624	0/0:20,0:20:51.10:0,51,551
chr10	73716945	.	C	CT	1988	PASS	AB=0.892;AC=17;AF=0.304;AN=56;BaseQRankSum=0.926;DP=591;FS=5.627;HRun=11;HaplotypeScore=78.0910;InbreedingCoeff=0.6389;MQ=67.66;MQ0=5;MQRankSum=-3.957;QD=9.33;ReadPosRankSum=-0.337;VQSLOD=2.7054;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,17:25:31.68:489,32,0	0/0:4,0:4:8.96:0,9,70	0/0:23,0:8:12.72:0,13,98	0/1:20,0:14:5.33:5,0,77	0/0:40,1:41:63.03:0,63,645	0/0:24,0:23:50.75:0,51,395	0/1:12,1:13:0.57:1,0,176	0/0:36,0:36:62.64:0,63,481	0/0:18,0:18:16.25:0,16,232	0/0:23,0:25:45.85:0,46,337	0/1:24,1:27:1.22:1,0,305	1/1:12,9:21:32.97:306,33,0	1/1:7,6:13:26.97:247,27,0	0/0:24,0:24:14.30:0,14,293	0/0:14,0:14:8.54:0,9,248	0/0:14,0:16:24.94:0,25,173	0/0:20,0:21:45.83:0,46,337	1/1:2,21:24:11.99:336,12,0	0/0:18,0:20:17.99:0,18,228	0/0:29,0:30:70.63:0,71,530	0/0:19,0:20:31.87:0,32,238	1/1:7,8:15:27.01:263,27,0	1/1:8,13:21:42.52:415,43,0	0/1:4,7:11:28.39:104,0,28	0/0:24,0:24:56.71:0,57,434	0/0:22,1:24:16.38:0,16,299	0/1:21,1:22:5.99:6,0,255	0/0:12,0:12:26.88:0,27,209
chr10	73716961	.	C	CT	837.36	PASS	AB=0.929;AC=13;AF=0.232;AN=56;BaseQRankSum=3.688;DP=572;FS=2.203;HRun=11;HaplotypeScore=70.3775;InbreedingCoeff=0.6781;MQ=59.38;MQ0=13;MQRankSum=-2.188;QD=5.77;ReadPosRankSum=-0.933;VQSLOD=1.6094;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,7:23:24.04:238,24,0	0/0:5,0:5:2.96:0,3,23	0/1:23,0:3:0:0,0,0	0/1:18,0:9:13.67:14,0,32	0/0:42,0:43:61.58:0,62,466	0/0:24,0:24:52.80:0,53,400	0/0:13,0:14:25.92:0,26,192	0/0:30,0:30:44.14:0,44,333	0/0:16,0:16:35.83:0,36,276	0/0:25,0:25:47.73:0,48,370	0/0:25,1:28:27.23:0,27,372	1/1:12,6:18:21.02:202,21,0	1/1:7,9:15:15.03:152,15,0	0/0:22,0:22:32.77:0,33,255	0/0:13,0:13:29.85:0,30,232	0/0:9,0:11:27.91:0,28,189	0/0:20,0:20:34.86:0,35,261	0/0:24,0:26:42.18:0,42,312	0/0:18,0:18:26.77:0,27,209	0/0:30,0:33:48.73:0,49,354	0/0:16,0:18:41.83:0,42,325	1/1:8,5:12:15.48:141,15,0	1/1:13,9:21:0.72:159,1,0	0/1:8,3:11:27.16:99,0,27	0/0:26,0:27:31.75:0,32,238	0/0:21,0:21:41.77:0,42,320	0/0:18,0:19:25.88:0,26,191	0/0:9,0:10:19.97:0,20,145
chr10	73718301	.	GTCATGGGGAACAGCATTTCCCCAACACC	G	678.30	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.754;DP=584;FS=0.000;HRun=0;HaplotypeScore=383.7882;InbreedingCoeff=0.9023;MQ=79.30;MQ0=0;MQRankSum=-2.274;QD=23.39;ReadPosRankSum=-1.414;VQSLOD=0.9711;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,20:29:12.04:764,12,0	0/0:9,0:9:24.08:0,24,2402	0/0:20,0:20:24.06:0,24,566	0/0:14,0:14:9.06:0,9,466	0/0:23,0:23:46.40:0,46,4508	0/0:20,0:20:48.14:0,48,3987	0/0:19,0:19:42.11:0,42,2094	0/0:22,0:22:42.13:0,42,1547	0/0:20,0:20:51.16:0,51,3954	0/0:19,0:19:39.13:0,39,3241	0/0:19,0:19:48.16:0,48,4172	0/0:28,0:28:63.18:0,63,5333	0/0:26,0:26:56.54:0,57,4680	0/0:32,0:32:72.20:0,72,7247	0/0:22,0:22:45.15:0,45,4750	0/0:11,0:11:21.03:0,21,1775	0/0:21,0:21:48.16:0,48,4853	0/0:20,0:20:48.15:0,48,3267	0/0:15,0:15:27.07:0,27,1241	0/0:25,0:25:48.12:0,48,3531	0/0:36,0:36:90.29:0,90,8127	0/0:22,0:22:51.13:0,51,4410	0/0:21,0:21:36.08:0,36,2854	0/0:15,0:15:39.10:0,39,2993	0/0:28,0:28:54.13:0,54,4278	0/0:19,0:19:45.14:0,45,3739	0/0:20,0:20:48.16:0,48,3756	0/0:9,0:9:21.07:0,21,1344
chr10	73718530	.	A	AGTGTGT	1661.85	PASS	AC=14;AF=0.269;AN=52;BaseQRankSum=3.218;DP=606;FS=3.943;HRun=0;HaplotypeScore=177.0226;InbreedingCoeff=0.8029;MQ=59.69;MQ0=7;MQRankSum=-6.184;QD=10.26;ReadPosRankSum=-3.537;VQSLOD=2.3136;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:37:9.26:161,9,0	0/0:3,0:4:6.02:0,6,103	./.	./.	0/0:22,0:26:45.82:0,46,818	0/0:17,0:18:18.94:0,19,334	0/0:22,0:22:26.30:0,26,496	0/0:26,0:26:2.09:0,2,95	0/0:17,0:18:13.58:0,14,585	0/0:15,0:26:27.09:0,27,377	0/0:10,0:18:11.72:0,12,167	1/1:11,10:22:12.04:387,12,0	1/1:8,2:13:12.04:286,12,0	0/0:20,0:22:30.09:0,30,535	0/0:26,0:28:33.04:0,33,610	0/0:23,0:23:39.11:0,39,782	0/0:31,0:33:42.14:0,42,823	1/1:12,0:12:6.91:128,7,0	0/0:15,0:16:8.89:0,9,114	0/0:19,0:22:36.11:0,36,643	0/0:22,0:24:21.06:0,21,359	1/1:20,8:28:8.66:288,9,0	1/1:14,6:20:6.02:169,6,0	1/1:25,3:28:17.74:415,18,0	0/0:6,0:17:27.09:0,27,376	0/0:15,0:15:6.02:0,6,122	0/0:24,0:25:13.18:0,13,559	0/0:4,0:12:2.66:0,3,5
chr10	73718837	.	AT	A	500.19	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.693;DP=613;FS=0.000;HRun=4;HaplotypeScore=56.3984;InbreedingCoeff=0.9820;MQ=68.62;MQ0=0;MQRankSum=-1.588;QD=27.79;ReadPosRankSum=0.514;VQSLOD=2.8621;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.25:0,78,1094	0/0:7,0:7:18.06:0,18,259	0/0:10,0:10:30.09:0,30,413	0/0:16,0:16:27.82:0,28,500	0/0:30,0:30:90.29:0,90,1278	0/0:29,0:29:84.28:0,84,1210	0/0:14,0:14:42.13:0,42,588	0/0:39,0:39:99:0,117,1668	0/0:17,0:17:51.16:0,51,716	0/0:28,0:28:84.28:0,84,1191	0/0:25,0:25:69.22:0,69,976	0/0:23,0:23:69.23:0,69,990	0/0:24,0:24:66.20:0,66,927	0/0:27,0:27:81.27:0,81,1166	0/0:33,0:33:99:0,99,1407	0/0:25,0:25:75.25:0,75,1079	0/0:22,0:22:66.22:0,66,949	1/1:0,18:18:48.15:595,48,0	0/0:12,0:12:30.10:0,30,432	0/0:30,0:30:87.29:0,87,1253	0/0:14,0:14:42.14:0,42,605	0/0:20,0:20:60.20:0,60,852	0/0:13,0:13:33.11:0,33,475	0/0:6,0:6:18.05:0,18,241	0/0:23,0:23:66.18:0,66,926	0/0:21,0:21:57.19:0,57,819	0/0:48,0:48:99:0,144,2066	0/0:12,0:12:36.12:0,36,518
chr10	73721532	.	CTCCACCCT	C	3982.17	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.562;DP=711;FS=1.971;HRun=0;HaplotypeScore=175.4510;InbreedingCoeff=0.9991;MQ=78.62;MQ0=0;MQRankSum=-11.013;QD=67.49;ReadPosRankSum=0.583;VQSLOD=3.9007;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,5285	0/0:10,0:10:30.09:0,30,1275	0/0:14,0:14:42.13:0,42,1390	0/0:20,0:19:57.17:0,57,1805	0/0:26,0:26:78.25:0,78,3403	0/0:24,0:24:72.25:0,72,3334	0/0:31,0:31:93.32:0,93,3939	0/0:28,0:28:84.29:0,84,3718	0/0:34,0:33:99:0,102,4569	1/1:0,20:20:60.21:1811,60,0	1/1:0,19:19:24.08:724,24,0	0/0:22,0:22:66.23:0,66,2988	0/0:29,0:29:84.29:0,84,3758	0/0:22,0:22:66.21:0,66,2913	0/0:31,0:31:93.32:0,93,4163	0/0:32,0:32:96.33:0,96,4275	0/0:36,0:36:99:0,108,4919	0/0:18,0:18:54.19:0,54,2501	0/0:17,0:17:51.17:0,51,1999	0/0:24,0:24:72.23:0,72,3107	0/0:51,0:51:99:0,150,6605	0/0:26,0:26:78.27:0,78,3581	0/0:18,0:18:54.19:0,54,2500	0/0:31,0:31:93.32:0,93,4306	1/1:0,20:20:48.16:1447,48,0	0/0:27,0:27:81.28:0,81,3552	0/0:29,0:29:87.30:0,87,3951	0/0:13,0:13:39.13:0,39,1764
chr10	73723519	.	AATAAATAAATAAATAAATATATATATATATATATATATAT	A	608.05	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=1.168;DP=158;FS=14.215;HRun=0;HaplotypeScore=144.2765;InbreedingCoeff=0.5548;MQ=84.80;MQ0=1;MQRankSum=-0.442;QD=19.61;ReadPosRankSum=-1.649;VQSLOD=1.8405;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:22.57:0,23,409	0/0:1,0:1:3:0,3,27	0/0:6,0:5:12.02:0,12,286	0/0:17,0:12:30.06:0,30,756	0/0:2,0:2:3.01:0,3,108	0/0:2,0:2:3.01:0,3,108	0/0:2,0:2:6.02:0,6,315	0/0:11,0:11:33.09:0,33,1448	0/0:6,0:6:18.02:0,18,310	1/1:5,0:5:8.93:163,9,0	1/1:2,10:13:3.01:276,3,0	1/1:2,0:2:3.01:50,3,0	0/1:2,0:2:43.86:44,0,176	0/0:5,0:5:12.04:0,12,274	0/0:5,0:5:9.02:0,9,219	0/0:4,0:4:9.02:0,9,252	0/0:11,0:10:27.98:0,28,2860	0/0:7,0:7:18.06:0,18,1182	0/0:9,0:8:24.08:0,24,699	0/0:4,0:4:12.04:0,12,297	0/0:1,0:1:3:0,3,25	./.	1/1:1,0:1:3:25,3,0	1/1:2,0:2:3:25,3,0	1/1:6,0:6:12:176,12,0	0/0:8,0:8:21.05:0,21,445	0/0:11,0:11:30.07:0,30,770	0/0:6,0:6:18.06:0,18,639
chr10	73723521	.	TAAATAAATAAATAA	T	527.51	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=1.456;DP=152;FS=17.371;HRun=0;HaplotypeScore=59.2988;InbreedingCoeff=0.6423;MQ=83.03;MQ0=1;MQRankSum=-0.062;QD=17.58;ReadPosRankSum=-0.936;VQSLOD=-0.2115;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:10.25:0,10,168	0/0:1,0:1:3:0,3,27	0/0:6,0:5:12.02:0,12,286	0/0:16,0:11:30.06:0,30,756	0/0:1,0:1:3.01:0,3,108	0/0:1,0:1:3.01:0,3,108	0/0:2,0:2:6.02:0,6,218	0/0:11,0:11:33.09:0,33,1013	0/0:6,0:6:18.02:0,18,310	1/1:0,5:5:9.49:163,9,0	1/1:12,0:12:3.01:94,3,0	1/1:2,0:2:3.01:50,3,0	1/1:2,0:2:6.02:149,6,0	0/0:5,0:5:12.04:0,12,274	0/0:3,0:3:9.02:0,9,219	0/0:3,0:3:9.02:0,9,252	0/0:12,0:11:28.04:0,28,1311	0/0:7,0:7:18.06:0,18,642	0/0:9,0:8:24.08:0,24,655	0/0:4,0:4:12.04:0,12,297	0/0:1,0:1:3:0,3,25	./.	1/1:1,0:1:3:25,3,0	1/1:2,0:2:3:25,3,0	1/1:6,0:6:12:176,12,0	0/0:7,1:8:21.05:0,21,445	0/0:10,0:10:30.07:0,30,618	0/0:7,0:7:18.06:0,18,639
chr10	73727103	.	A	ACCAAC	2045.42	PASS	AB=0.990;AC=19;AF=0.339;AN=56;BaseQRankSum=-10.107;DP=463;FS=1.904;HRun=0;HaplotypeScore=155.2988;InbreedingCoeff=0.0140;MQ=70.88;MQ0=4;MQRankSum=-1.653;QD=7.60;ReadPosRankSum=-0.683;VQSLOD=2.6250;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:34.02:0,34,345	0/0:14,0:14:20.94:0,21,146	0/1:27,0:15:9.02:9,0,41	0/0:17,0:14:2.07:0,2,60	0/1:21,0:20:33.97:34,0,106	0/0:14,0:14:28.79:0,29,164	0/1:19,0:19:65.25:69,0,65	1/1:24,0:24:5.60:86,6,0	0/1:8,0:8:13.36:13,0,39	1/1:16,3:19:33.34:576,33,0	1/1:7,1:8:6.02:130,6,0	0/0:20,0:20:45.12:0,45,498	0/0:12,0:12:15.04:0,15,166	0/1:24,0:24:65.76:74,0,66	0/1:19,0:19:65.39:65,0,114	0/0:13,0:13:1.41:0,1,46	0/0:22,0:22:12.88:0,13,134	0/1:6,0:6:17.99:88,0,18	0/0:11,0:11:7.35:0,7,26	0/1:19,0:19:12.20:12,0,93	0/1:26,0:26:42.70:43,0,115	0/0:16,0:16:18.45:0,18,184	0/0:9,0:9:6.02:0,6,66	0/0:9,0:9:9.02:0,9,99	1/1:4,8:11:33.10:810,33,0	0/1:12,1:13:42.94:145,0,43	0/1:23,0:23:62.30:62,0,102	0/0:5,0:5:11.31:0,11,55
chr10	73727122	.	ACCCGGCCCAACCCAG	A	6216.08	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=-13.328;DP=478;FS=3.179;HRun=0;HaplotypeScore=238.3008;InbreedingCoeff=-0.2821;MQ=68.21;MQ0=5;MQRankSum=-6.552;QD=16.36;ReadPosRankSum=-8.685;VQSLOD=1.4541;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:30:1.13:0,1,746	0/1:12,0:12:1.18:1,0,979	0/0:33,0:14:24.37:0,24,394	0/1:29,0:20:58.51:59,0,237	0/1:16,0:15:99:127,0,989	0/1:14,0:14:15.67:16,0,1464	0/1:21,0:21:99:115,0,1426	0/1:18,0:18:99:316,0,373	0/1:12,0:12:99:155,0,448	0/1:15,0:15:17.22:17,0,876	0/1:5,0:5:28.89:29,0,138	1/1:2,22:24:45.15:2002,45,0	1/1:2,14:16:21.54:896,22,0	0/1:26,0:26:99:227,0,1358	0/1:18,0:18:89.55:90,0,1146	0/1:9,0:9:30.74:31,0,852	0/1:19,0:19:6.66:7,0,1735	0/1:6,0:6:4.93:5,0,229	0/0:7,0:7:11.65:0,12,463	0/1:19,0:19:99:189,0,1319	0/1:27,0:26:99:108,0,1855	1/1:1,15:16:30.02:1042,30,0	1/1:3,13:16:6.02:267,6,0	1/1:3,9:12:9.03:401,9,0	0/1:13,0:12:30.64:31,0,1091	0/1:17,0:17:86.91:87,0,971	0/0:20,0:19:36.19:0,36,1849	0/0:8,0:8:17.56:0,18,619
chr10	73728956	.	C	CTGTG	1781.37	PASS	AB=0.924;AC=28;AF=0.519;AN=54;BaseQRankSum=1.985;DP=746;FS=2.654;HRun=0;HaplotypeScore=170.2469;InbreedingCoeff=0.4752;MQ=65.56;MQ0=18;MQRankSum=-2.278;QD=3.84;ReadPosRankSum=-1.742;VQSLOD=2.2976;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:32:8.82:125,9,0	0/0:7,0:7:3.01:0,3,44	./.	0/1:44,0:29:0:0,0,0	0/0:21,0:23:8.38:0,8,100	0/0:18,0:18:6:0,6,64	0/0:22,0:22:6.01:0,6,74	1/1:24,0:23:0.46:1,0,0	0/0:26,0:27:7.03:0,7,261	1/1:46,0:44:56.43:779,56,0	1/1:34,0:34:8.70:136,9,0	1/1:21,9:34:14.79:292,15,0	1/1:18,9:30:6.02:140,6,0	0/0:21,0:23:12.01:0,12,144	0/0:31,0:31:20.03:0,20,197	0/0:20,0:26:32.49:0,32,424	0/0:24,0:24:16.58:0,17,221	1/1:25,0:23:3.90:40,4,0	0/1:16,0:16:0:0,0,0	0/1:22,0:28:6.78:7,0,124	0/0:41,0:41:18.47:0,18,192	1/1:16,3:20:3.01:70,3,0	0/1:14,4:18:12.88:64,0,13	1/1:17,3:20:8.75:152,9,0	1/1:33,0:32:8.95:123,9,0	1/1:26,0:24:1.47:4,1,0	0/1:23,0:22:13.96:14,0,60	0/1:7,0:9:0.44:0,0,86
chr10	73731299	.	TTTTCCTTCC	T	1474.01	PASS	AB=0.800;AC=17;AF=0.304;AN=56;BaseQRankSum=5.124;DP=528;FS=3.515;HRun=0;HaplotypeScore=145.7147;InbreedingCoeff=0.7881;MQ=78.01;MQ0=2;MQRankSum=-2.187;QD=15.52;ReadPosRankSum=0.597;VQSLOD=2.5624;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:3.20:0,3,14	0/0:10,0:10:9.02:0,9,162	0/0:28,0:26:10.27:0,10,192	0/0:28,0:20:17.91:0,18,407	0/0:17,0:17:36.12:0,36,1334	0/0:25,0:24:63.13:0,63,1628	0/0:19,0:19:36.12:0,36,1081	0/0:35,0:35:36.12:0,36,1127	0/0:18,0:18:27.08:0,27,1066	1/1:7,8:15:18.06:436,18,0	0/1:9,3:12:1.97:287,0,2	1/1:11,0:11:18.05:265,18,0	1/1:9,0:8:6.01:63,6,0	0/0:20,0:20:33.09:0,33,1132	0/0:21,0:21:51.16:0,51,1984	0/0:29,0:29:66.23:0,66,2581	0/0:21,0:21:45.13:0,45,1590	1/1:6,8:14:3.01:83,3,0	0/0:32,0:32:54.16:0,54,1622	0/0:16,0:16:33.10:0,33,1285	0/0:37,0:37:87.29:0,87,3125	1/1:6,0:6:4.75:55,5,0	1/1:4,3:7:3.01:33,3,0	1/1:7,0:7:11.98:154,12,0	1/1:12,2:13:15:281,15,0	0/0:11,0:11:9.03:0,9,338	0/0:33,0:32:60.16:0,60,2424	0/0:11,0:11:27.09:0,27,1007
chr10	73731313	.	CTTCCT	C	463.54	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=7.009;DP=504;FS=2.848;HRun=0;HaplotypeScore=102.4239;InbreedingCoeff=0.1284;MQ=63.81;MQ0=3;MQRankSum=-1.910;QD=6.35;ReadPosRankSum=1.625;VQSLOD=1.9145;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:17:18.06:307,18,0	0/0:9,0:9:24.08:0,24,416	0/0:30,0:14:16.57:0,17,389	0/0:39,0:20:34.28:0,34,633	0/0:17,0:17:45.15:0,45,1244	0/0:25,0:24:68.90:0,69,1720	0/0:19,0:19:48.16:0,48,1238	0/0:33,0:33:81.27:0,81,2000	0/0:13,0:13:36.11:0,36,882	0/1:14,0:14:97.92:98,0,169	0/1:12,0:12:90.77:91,0,187	0/1:9,0:9:19.35:19,0,55	0/0:5,0:5:5.14:0,5,43	0/0:18,0:18:48.16:0,48,1183	0/0:18,0:18:54.19:0,54,1540	0/0:28,0:28:81.26:0,81,2210	0/0:21,0:21:54.16:0,54,1475	0/1:12,0:12:21.85:22,0,31	0/0:34,0:33:93.31:0,93,2313	0/0:20,0:20:51.16:0,51,1302	0/0:35,0:35:96.33:0,96,2622	0/0:6,0:6:15.50:0,15,170	0/0:7,0:7:7.27:0,7,93	0/0:7,0:6:1.02:0,1,72	0/1:9,0:8:61.06:61,0,107	0/0:9,0:9:24.08:0,24,538	0/0:27,0:24:75.23:0,75,1965	0/0:11,0:11:30.10:0,30,847
chr10	73731326	.	CT	C	350.31	PASS	AB=0.861;AC=15;AF=0.268;AN=56;BaseQRankSum=8.514;DP=481;FS=15.604;HRun=3;HaplotypeScore=67.4300;InbreedingCoeff=0.5815;MQ=53.94;MQ0=13;MQRankSum=-3.223;QD=4.49;ReadPosRankSum=0.234;VQSLOD=-0.7254;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:11.74:52,12,0	0/0:6,0:6:9.03:0,9,126	0/0:36,0:6:9.16:0,9,166	0/0:43,1:15:35.03:0,35,401	0/0:16,0:15:45.13:0,45,613	0/0:21,0:20:54.18:0,54,764	0/0:14,0:14:40.38:0,40,561	0/0:34,0:33:90.27:0,90,1229	0/0:11,0:10:27.09:0,27,389	0/1:12,0:12:16.18:16,0,120	0/1:9,4:13:27.01:27,0,97	1/1:4,4:7:14.55:165,15,0	1/1:0,4:4:8.61:81,9,0	0/0:16,0:16:42.14:0,42,601	0/0:18,0:17:48.16:0,48,690	0/0:26,0:26:75.24:0,75,1061	0/0:17,0:17:48.16:0,48,684	0/0:9,0:9:0.99:0,1,37	0/0:34,0:33:90.01:0,90,1136	0/0:17,0:18:42.14:0,42,604	0/0:36,0:36:99:0,102,1384	1/1:2,3:5:7.57:73,8,0	1/1:3,1:4:3.01:34,3,0	1/1:3,3:5:5.95:42,6,0	0/1:7,2:8:33.11:33,0,73	0/0:11,0:11:27.09:0,27,387	0/0:23,0:20:63.21:0,63,906	0/0:9,0:9:27.09:0,27,387
chr10	73731339	.	CCTCCCTCT	C	451.24	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-1.021;DP=460;FS=7.358;HRun=0;HaplotypeScore=106.7241;InbreedingCoeff=0.6433;MQ=48.77;MQ0=28;MQRankSum=2.922;QD=8.20;ReadPosRankSum=0.710;VQSLOD=1.6709;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:3.43:0,3,21	1/1:1,6:7:5.95:80,6,0	0/0:33,0:3:8.80:0,9,65	0/0:38,0:11:23.72:0,24,147	0/0:17,0:15:35.50:0,36,301	1/1:21,0:18:34.20:295,34,0	1/1:15,0:12:23.92:206,24,0	0/0:28,0:24:65.84:0,66,567	0/0:10,0:9:21.01:0,21,208	0/0:15,0:14:19.35:0,19,154	0/0:12,0:12:14.18:0,14,90	0/0:10,0:9:17.33:0,17,121	0/0:6,0:5:8.36:0,8,46	0/0:16,0:16:38.35:0,38,451	0/0:15,0:14:36.60:0,37,298	0/0:22,0:21:48.78:0,49,404	0/0:16,0:16:29.86:0,30,302	0/0:10,0:10:5.75:0,6,55	0/0:25,0:24:59.91:0,60,572	0/0:24,0:24:35.75:0,36,354	0/0:35,0:32:67.02:0,67,709	0/0:9,0:8:5.15:0,5,66	0/0:7,0:6:5.73:0,6,59	0/0:3,0:2:0:0,0,0	0/1:12,0:11:6.07:6,0,134	0/0:14,0:13:29.66:0,30,501	0/0:20,0:18:56.69:0,57,467	0/0:7,0:6:14.96:0,15,121
chr10	73731434	.	CTT	C	1075.34	PASS	AB=0.712;AC=7;AF=0.135;AN=52;BaseQRankSum=8.893;DP=549;FS=0.651;HRun=3;HaplotypeScore=92.4311;InbreedingCoeff=0.3264;MQ=47.48;MQ0=28;MQRankSum=-9.545;QD=17.92;ReadPosRankSum=-0.829;VQSLOD=0.6410;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:10:0.63:0,1,52	0/0:12,0:12:30.10:0,30,579	0/0:40,0:3:9.03:0,9,129	0/0:63,0:10:0.35:0,0,190	0/0:24,0:24:69.21:0,69,1227	0/0:20,0:20:57.20:0,57,1100	0/0:22,0:21:51.28:0,51,990	0/0:26,0:23:63.65:0,64,1073	0/0:18,0:18:39.12:0,39,697	0/1:5,14:18:8.24:564,0,8	0/1:3,11:14:45.88:235,0,46	1/1:5,0:4:1.40:7,1,0	0/1:7,0:5:6.02:10,0,6	0/0:18,0:18:54.17:0,54,981	0/0:28,0:28:84.23:0,84,1419	0/0:20,0:20:57.16:0,57,969	0/0:15,0:14:36.06:0,36,590	0/0:9,0:8:20.74:0,21,357	0/0:29,0:24:65.87:0,66,1143	0/0:33,0:32:96.30:0,96,1752	0/0:18,0:17:51.09:0,51,873	./.	./.	0/0:2,0:2:4.61:0,5,18	1/1:3,12:14:6.90:375,7,0	0/0:23,0:23:60.18:0,60,1037	0/0:26,0:24:72.25:0,72,1371	0/0:21,0:18:54.12:0,54,880
chr10	73735020	.	GT	G	2163.32	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=16.286;DP=814;FS=0.380;HRun=2;HaplotypeScore=113.1812;InbreedingCoeff=0.9998;MQ=66.32;MQ0=5;MQRankSum=-3.063;QD=16.39;ReadPosRankSum=2.496;VQSLOD=3.8305;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,2128	0/0:12,0:12:36.12:0,36,530	0/0:54,0:40:97.60:0,98,1532	0/0:40,0:27:54.30:0,54,821	0/0:30,0:30:90.30:0,90,1334	0/0:19,0:19:57.18:0,57,819	0/0:24,0:24:38.60:0,39,902	0/0:40,0:40:65.79:0,66,1573	0/0:26,0:26:78.26:0,78,1140	0/0:39,0:39:99:0,114,1684	0/0:30,0:30:90.30:0,90,1310	1/1:17,4:20:52.95:368,53,0	1/1:24,6:29:73.76:508,74,0	0/0:28,0:28:84.27:0,84,1234	0/0:35,0:35:99:0,102,1495	0/0:28,0:28:84.27:0,84,1222	0/0:24,0:24:72.19:0,72,1020	0/0:14,0:14:42.14:0,42,625	0/0:18,0:18:51.17:0,51,742	0/0:40,0:40:99:0,117,1713	0/0:28,0:28:81.27:0,81,1214	1/1:28,8:35:88.33:658,88,0	1/1:19,8:25:67.47:521,67,0	1/1:14,4:18:41.41:284,41,0	0/0:23,0:23:69.22:0,69,1001	0/0:29,0:29:87.29:0,87,1294	0/0:40,0:40:99:0,120,1736	0/0:10,0:10:28.34:0,28,407
chr10	73735021	.	T	TG	4344.26	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=16.082;DP=822;FS=1.694;HRun=1;HaplotypeScore=107.5736;InbreedingCoeff=0.9981;MQ=66.30;MQ0=5;MQRankSum=-1.713;QD=32.66;ReadPosRankSum=2.431;VQSLOD=4.7014;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,147,2004	0/0:13,0:13:36.12:0,36,500	0/0:54,0:40:85.53:0,86,1431	0/0:43,0:29:42.69:0,43,740	0/0:31,0:31:90.30:0,90,1253	0/0:19,0:19:57.18:0,57,774	0/0:23,1:24:18.84:0,19,826	0/0:37,2:39:28.60:0,29,1439	0/0:27,0:27:78.25:0,78,1070	0/0:39,0:39:99:0,114,1579	0/0:30,0:30:90.29:0,90,1235	1/1:4,17:20:54.17:708,54,0	1/1:8,22:29:78.06:967,78,0	0/0:28,0:28:84.27:0,84,1152	0/0:34,0:34:99:0,102,1403	0/0:28,0:28:84.27:0,84,1152	0/0:24,0:24:72.18:0,72,962	0/0:14,0:14:42.14:0,42,586	0/0:18,0:18:51.17:0,51,702	0/0:40,0:40:99:0,117,1620	0/0:29,0:29:81.27:0,81,1133	1/1:10,27:36:90.29:1200,90,0	1/1:9,18:25:69.22:909,69,0	1/1:4,14:18:41.75:561,42,0	0/0:25,0:25:69.22:0,69,942	0/0:29,0:29:87.29:0,87,1206	0/0:40,0:40:99:0,120,1631	0/0:10,0:10:29.99:0,30,394
chr10	73735024	.	T	TGG	4997.29	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=15.405;DP=821;FS=0.000;HRun=1;HaplotypeScore=122.1572;InbreedingCoeff=0.9999;MQ=64.34;MQ0=5;MQRankSum=-2.869;QD=36.74;ReadPosRankSum=2.481;VQSLOD=5.1503;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,126,1949	0/0:14,0:14:39.12:0,39,574	0/0:50,0:36:99:0,102,1363	0/0:43,0:29:70.01:0,70,902	0/0:30,0:30:90.26:0,90,1350	0/0:19,0:19:54.17:0,54,803	0/0:24,0:24:68.64:0,69,969	0/0:42,0:42:99:0,120,1624	0/0:27,0:27:78.23:0,78,1140	0/0:42,0:42:99:0,117,1699	0/0:29,0:29:87.27:0,87,1284	1/1:6,16:22:56.87:845,57,0	1/1:9,20:28:72.58:1091,73,0	0/0:29,0:29:87.25:0,87,1265	0/0:33,0:33:99:0,99,1492	0/0:27,0:27:81.22:0,81,1154	0/0:24,0:24:69.19:0,69,1001	0/0:15,0:15:42.14:0,42,642	0/0:18,0:18:54.01:0,54,701	0/0:38,0:38:99:0,108,1609	0/0:30,0:30:90.25:0,90,1311	1/1:11,26:36:93:1372,93,0	1/1:12,16:26:48.59:933,49,0	1/1:5,14:19:45.13:757,45,0	0/0:25,0:25:72.21:0,72,1039	0/0:29,0:29:87.25:0,87,1251	0/0:37,0:37:99:0,111,1631	0/0:10,0:10:30.03:0,30,428
chr10	73735194	.	C	CT	7465.07	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-3.836;DP=757;FS=5.253;HRun=3;HaplotypeScore=75.6553;InbreedingCoeff=0.9948;MQ=88.04;MQ0=0;MQRankSum=-6.658;QD=37.51;ReadPosRankSum=1.984;VQSLOD=5.3722;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,147,1750	0/0:13,0:13:39.11:0,39,457	0/0:28,0:28:75.23:0,75,896	0/0:29,0:29:78.13:0,78,905	0/0:30,0:30:87.20:0,87,996	0/0:24,0:24:72.22:0,72,863	0/0:32,0:32:90.28:0,90,1080	0/0:36,0:35:99:0,99,1178	0/0:24,0:24:69.21:0,69,826	1/1:2,34:36:99:1407,102,0	1/1:0,25:25:72.24:1008,72,0	1/1:0,24:24:54.18:756,54,0	1/1:2,35:37:99:1424,102,0	0/0:36,0:36:99:0,99,1176	0/0:38,0:38:99:0,108,1296	0/0:35,0:35:99:0,99,1165	0/0:27,0:27:75.23:0,75,900	0/0:14,0:14:42.13:0,42,504	0/0:13,0:13:36.11:0,36,432	0/0:25,0:25:72.20:0,72,852	0/0:34,0:34:99:0,99,1177	1/1:0,18:19:54.18:750,54,0	1/1:1,18:19:51.13:692,51,0	1/1:0,25:25:63.21:882,63,0	1/1:1,13:14:39.13:546,39,0	0/0:25,1:26:33.18:0,33,802	0/0:35,0:35:99:0,102,1187	0/0:4,0:4:12.04:0,12,144
chr10	73736808	.	CTG	C	2990.55	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.516;DP=682;FS=7.945;HRun=0;HaplotypeScore=203.9764;InbreedingCoeff=0.9928;MQ=79.57;MQ0=0;MQRankSum=-9.209;QD=40.97;ReadPosRankSum=-1.421;VQSLOD=2.8648;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,2256	0/0:7,0:7:21.07:0,21,404	0/0:15,0:15:45.11:0,45,827	0/0:28,0:28:73.44:0,73,1318	0/0:28,0:28:60.21:0,60,1157	0/0:21,0:20:57.09:0,57,1058	0/0:16,0:16:48.16:0,48,925	0/0:38,0:38:99:0,111,2097	0/0:25,0:25:72.25:0,72,1389	1/1:1,24:25:72.23:1081,72,0	1/1:3,16:19:48.16:724,48,0	0/0:46,0:46:99:0,126,2364	0/0:23,0:23:63.22:0,63,1201	0/0:24,0:24:63.22:0,63,1214	0/0:29,0:29:84.29:0,84,1606	0/0:39,0:39:99:0,114,2159	0/0:25,0:25:72.19:0,72,1325	0/0:17,0:17:51.17:0,51,965	0/0:12,0:11:33.11:0,33,638	0/0:32,0:32:87.30:0,87,1674	0/0:24,0:24:57.20:0,57,1095	0/0:20,0:20:57.20:0,57,1086	0/0:16,0:16:39.13:0,39,752	0/0:21,0:21:51.16:0,51,938	1/1:1,28:29:87.30:1329,87,0	0/0:24,0:24:69.16:0,69,1260	0/0:29,0:29:75.26:0,75,1446	0/0:8,0:8:15.05:0,15,290
chr10	73739144	.	ATCTGTCTATG	A	653.86	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.716;DP=739;FS=15.155;HRun=0;HaplotypeScore=215.9672;InbreedingCoeff=0.9143;MQ=75.43;MQ0=1;MQRankSum=-5.050;QD=25.15;ReadPosRankSum=-0.226;VQSLOD=1.5198;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,20:26:12.12:740,12,0	0/0:13,0:13:33.11:0,33,1712	0/0:21,0:21:52.06:0,52,1958	0/0:27,0:26:65.89:0,66,2720	0/0:25,0:25:69.20:0,69,3068	0/0:20,0:20:54.03:0,54,2523	0/0:33,0:33:84.25:0,84,3977	0/0:37,0:37:99:0,99,4052	0/0:26,0:26:78.24:0,78,3775	0/0:30,0:30:87.26:0,87,4143	0/0:26,0:26:72.25:0,72,3576	0/0:26,0:26:75.23:0,75,3362	0/0:30,0:30:81.25:0,81,3937	0/0:28,0:28:81.22:0,81,3806	0/0:26,0:26:72.25:0,72,3568	0/0:22,0:22:66.21:0,66,3243	0/0:25,0:25:63.13:0,63,2614	0/0:27,0:27:75.24:0,75,3450	0/0:28,0:28:69.17:0,69,2850	0/0:34,0:34:99:0,102,4958	0/0:35,0:35:93.25:0,93,4030	0/0:20,0:20:60.18:0,60,2717	0/0:25,0:25:72.21:0,72,3475	0/0:31,0:31:84.24:0,84,3854	0/0:32,0:32:93.28:0,93,4437	0/0:36,0:36:99:0,99,4414	0/0:27,0:27:75.18:0,75,3432	0/0:3,0:3:9.03:0,9,459
chr10	73741463	.	CT	C	1835.60	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=11.557;DP=532;FS=1.638;HRun=6;HaplotypeScore=77.9827;InbreedingCoeff=0.8565;MQ=77.32;MQ0=0;MQRankSum=-5.630;QD=22.12;ReadPosRankSum=-0.007;VQSLOD=2.7753;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:18.06:0,18,236	0/0:8,0:8:24.06:0,24,301	0/0:12,0:12:27.07:0,27,323	0/1:13,0:13:7:7,0,176	0/0:27,0:27:81.26:0,81,1066	0/0:28,0:28:81.24:0,81,1031	0/0:21,0:21:57.18:0,57,736	0/0:44,0:44:99:0,120,1578	0/0:13,0:13:36.12:0,36,473	1/1:5,19:24:57.14:611,57,0	1/1:3,18:21:54.09:567,54,0	0/0:17,0:17:48.16:0,48,631	0/0:21,0:21:57.17:0,57,735	0/0:9,0:9:21.07:0,21,276	0/0:21,0:21:60.19:0,60,777	0/0:20,0:20:57.19:0,57,750	0/0:21,0:21:63.19:0,63,813	0/0:19,0:19:54.12:0,54,662	0/0:11,0:11:30.10:0,30,395	0/0:26,0:26:75.24:0,75,987	0/0:14,0:14:42.14:0,42,553	0/0:18,0:18:54.17:0,54,697	0/0:18,0:18:42.13:0,42,552	0/0:14,0:14:39.13:0,39,513	1/1:1,24:25:75.17:797,75,0	0/0:16,0:16:45.15:0,45,592	0/0:29,0:29:84.27:0,84,1105	0/0:14,0:14:36.12:0,36,472
chr10	73741505	.	GAA	G	5729.25	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.573;DP=501;FS=2.153;HRun=5;HaplotypeScore=81.9574;InbreedingCoeff=0.9931;MQ=81.80;MQ0=0;MQRankSum=-7.751;QD=34.72;ReadPosRankSum=3.334;VQSLOD=4.4804;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:21.07:294,21,0	0/0:4,0:4:12.04:0,12,220	0/0:19,0:19:51.16:0,51,879	0/0:13,0:13:33.03:0,33,499	0/0:27,0:27:81.28:0,81,1481	0/0:24,0:24:69.24:0,69,1259	0/0:15,0:15:42.14:0,42,764	0/0:39,0:39:99:0,108,1948	0/0:16,0:16:45.15:0,45,824	1/1:1,26:27:75.22:1027,75,0	1/1:2,17:19:42.14:587,42,0	1/1:1,13:14:36.12:504,36,0	1/1:1,16:17:39.13:546,39,0	0/0:7,0:7:18.06:0,18,315	0/0:20,0:20:60.21:0,60,1100	0/0:18,0:18:54.19:0,54,990	0/0:25,0:25:75.26:0,75,1373	1/1:1,8:9:24.08:336,24,0	0/0:11,0:11:33.11:0,33,593	0/0:26,0:26:78.27:0,78,1423	0/0:14,0:14:42.14:0,42,770	1/1:0,16:16:48.16:672,48,0	1/1:1,19:20:39.12:546,39,0	1/1:1,11:12:30.10:420,30,0	1/1:1,20:21:57.19:797,57,0	0/0:15,0:15:45.15:0,45,818	0/0:27,0:27:78.27:0,78,1424	0/0:16,0:16:48.06:0,48,773
chr10	73741644	.	AACACACAC	A	1626.90	PASS	AB=0.763;AC=8;AF=0.154;AN=52;BaseQRankSum=0.420;DP=441;FS=4.232;HRun=0;HaplotypeScore=122.7094;InbreedingCoeff=0.7161;MQ=68.12;MQ0=12;MQRankSum=-0.948;QD=23.58;ReadPosRankSum=0.306;VQSLOD=2.8902;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:2,0:2:3.01:0,3,76	0/0:28,0:14:21.07:0,21,637	0/0:26,0:12:15.44:0,15,415	0/0:17,0:17:37.74:0,38,1237	0/0:19,0:19:42.14:0,42,1322	0/0:13,0:13:30.09:0,30,867	0/0:27,0:27:51.15:0,51,1547	0/0:9,0:9:27.09:0,27,871	0/0:19,0:17:42.14:0,42,1223	0/0:20,0:20:32.98:0,33,1052	1/1:12,0:12:33.11:854,33,0	1/1:3,18:20:15.05:316,15,0	0/0:8,0:8:11.91:0,12,402	0/0:22,0:21:45.07:0,45,1262	0/0:14,0:14:27.09:0,27,888	0/0:16,0:15:27.02:0,27,800	0/0:12,0:11:30.07:0,30,837	0/0:9,0:9:18.05:0,18,562	0/0:19,0:19:32.88:0,33,1090	0/0:8,0:8:18.06:0,18,587	0/1:1,9:10:0:0,0,0	./.	1/1:13,0:12:21.07:517,21,0	0/0:7,0:15:6.02:0,6,152	0/0:14,0:14:33.11:0,33,1049	0/0:26,0:25:69.20:0,69,2043	0/1:13,0:12:81.08:81,0,552
chr10	73742537	.	CT	C	4784.54	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.982;DP=586;FS=7.053;HRun=8;HaplotypeScore=59.0461;InbreedingCoeff=0.9916;MQ=84.57;MQ0=0;MQRankSum=-3.280;QD=25.05;ReadPosRankSum=3.069;VQSLOD=5.6894;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.17:0,63,744	0/0:10,0:10:24.04:0,24,275	0/0:19,0:19:44.96:0,45,498	0/0:16,1:17:10.43:0,10,346	0/0:25,0:25:63.19:0,63,761	0/0:23,0:22:54.17:0,54,652	0/0:12,0:12:36.11:0,36,435	0/0:30,0:30:84.24:0,84,995	0/0:11,0:11:33.10:0,33,399	1/1:1,28:29:84.13:811,84,0	1/1:4,21:25:63.01:596,63,0	1/1:3,16:19:45.07:433,45,0	1/1:2,21:23:63.10:608,63,0	0/0:30,0:30:84.26:0,84,1012	0/0:21,0:21:54.17:0,54,652	0/0:23,0:23:66.19:0,66,787	0/0:19,0:19:45.14:0,45,543	1/1:2,17:20:48.02:454,48,0	0/0:23,0:24:60.05:0,60,703	0/0:22,0:22:54.17:0,54,652	0/0:19,0:19:54.12:0,54,636	1/1:0,17:17:48.08:463,48,0	1/1:2,16:18:48.07:464,48,0	1/1:1,13:14:36.06:348,36,0	1/1:2,24:26:63.10:608,63,0	0/0:26,0:26:69.20:0,69,825	0/0:32,0:32:84.26:0,84,1015	0/0:8,0:8:18.06:0,18,217
chr10	73743457	.	C	CA	488.24	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.475;DP=667;FS=2.218;HRun=2;HaplotypeScore=71.5231;InbreedingCoeff=0.9726;MQ=75.80;MQ0=0;MQRankSum=-2.042;QD=32.55;ReadPosRankSum=0.181;VQSLOD=3.4421;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,150,1931	0/0:5,0:5:15.05:0,15,195	0/0:20,0:20:51.28:0,51,618	0/0:8,0:8:20.83:0,21,215	0/0:22,0:22:66.21:0,66,856	0/0:21,0:21:63.20:0,63,817	0/0:19,0:19:54.16:0,54,686	0/0:26,0:26:69.21:0,69,882	0/0:16,0:16:45.15:0,45,584	0/0:21,0:21:60.18:0,60,765	0/0:22,0:22:66.19:0,66,841	0/0:25,0:25:75.22:0,75,946	0/0:27,0:27:78.22:0,78,982	0/0:37,0:37:99:0,102,1304	0/0:28,0:28:81.26:0,81,1052	0/0:28,0:28:84.27:0,84,1090	0/0:17,0:17:48.16:0,48,622	1/1:3,12:15:35.68:583,36,0	0/0:26,0:26:75.23:0,75,958	0/0:29,0:29:87.25:0,87,1099	0/0:37,0:37:99:0,108,1386	0/0:21,0:21:63.20:0,63,818	0/0:29,0:29:84.26:0,84,1075	0/0:18,0:18:54.18:0,54,701	0/0:31,0:31:93.30:0,93,1207	0/0:26,0:26:75.24:0,75,974	0/0:36,0:35:99:0,108,1385	0/0:6,0:6:18.06:0,18,233
chr10	73744726	.	T	TA	2452.97	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=3.317;DP=299;FS=8.148;HRun=1;HaplotypeScore=39.4765;InbreedingCoeff=0.9363;MQ=76.71;MQ0=1;MQRankSum=1.402;QD=29.91;ReadPosRankSum=3.096;VQSLOD=2.6297;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:44.98:0,45,492	0/0:3,0:3:9.03:0,9,115	0/0:15,0:12:16.18:0,16,197	0/0:10,0:8:8.76:0,9,56	0/0:11,0:11:33.05:0,33,359	0/0:9,0:9:27.05:0,27,329	0/0:7,0:7:21:0,21,225	0/0:34,0:33:90.20:0,90,1032	0/0:6,0:6:18.04:0,18,207	1/1:0,14:14:42.10:533,42,0	1/1:0,18:18:53.88:646,54,0	1/1:0,5:5:9.03:125,9,0	1/1:0,13:13:27.09:375,27,0	0/0:7,0:7:18.03:0,18,194	0/0:5,0:5:12.04:0,12,152	0/0:6,0:6:18.04:0,18,205	0/0:15,0:15:42.05:0,42,480	1/1:1,6:7:15.14:245,15,0	0/0:16,0:16:39.03:0,39,408	0/0:11,0:11:22.93:0,23,340	0/0:4,0:4:12.02:0,12,138	./.	1/1:0,7:7:15.01:187,15,0	1/1:0,6:6:9.03:125,9,0	1/1:0,12:12:30.10:416,30,0	0/0:9,0:9:27.06:0,27,312	0/0:18,0:18:40.71:0,41,551	0/0:11,0:11:30.05:0,30,355
chr10	73744772	.	GTATCTATC	G	603.17	PASS	AB=1.000;AC=21;AF=0.700;AN=30;BaseQRankSum=-1.858;DP=203;FS=2.696;HRun=0;HaplotypeScore=68.1384;InbreedingCoeff=0.3116;MQ=69.43;MQ0=4;MQRankSum=-1.480;QD=7.73;ReadPosRankSum=-0.409;VQSLOD=1.3304;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:20:7.47:0,7,67	1/1:2,1:3:3.01:71,3,0	./.	./.	1/1:9,0:13:2.98:36,3,0	1/1:10,0:10:6.02:100,6,0	./.	./.	1/1:5,0:5:3.01:56,3,0	1/1:7,0:7:3.48:40,3,0	./.	./.	./.	./.	1/1:3,3:6:6.02:127,6,0	1/1:2,2:4:3.01:71,3,0	0/0:8,0:8:0:0,0,0	0/0:6,0:6:6.02:0,6,116	./.	./.	1/1:4,0:4:2.98:22,3,0	./.	./.	0/1:7,0:7:18.99:20,0,19	0/0:11,0:11:8.98:0,9,180	1/1:3,2:5:6.01:98,6,0	1/1:9,5:14:2.98:72,3,0	./.
chr10	73753173	.	AT	A	2210.29	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.137;DP=593;FS=13.748;HRun=10;HaplotypeScore=65.6746;InbreedingCoeff=0.9699;MQ=73.76;MQ0=1;MQRankSum=-1.342;QD=20.09;ReadPosRankSum=1.260;VQSLOD=3.5286;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,1:44:74.63:0,75,1095	0/0:9,0:9:18.05:0,18,199	0/0:16,0:15:29.76:0,30,266	0/0:16,0:11:17.95:0,18,157	0/0:23,1:24:40.12:0,40,671	0/0:14,0:14:36.10:0,36,398	0/0:19,0:19:57.15:0,57,630	0/0:26,0:26:72.19:0,72,797	0/0:19,0:19:47.14:0,47,494	0/0:22,0:22:55.38:0,55,592	0/0:19,0:19:39.11:0,39,431	1/1:2,27:29:71.98:625,72,0	1/1:2,23:25:62.98:547,63,0	0/0:19,1:20:31.05:0,31,550	0/0:18,1:19:22.04:0,22,459	0/0:17,1:18:19.07:0,19,439	0/0:30,0:30:43.50:0,43,683	0/0:25,0:25:66.18:0,66,730	0/0:22,0:22:55.37:0,55,587	0/0:23,0:24:56.91:0,57,588	0/0:21,0:21:45.12:0,45,498	1/1:3,19:22:50.97:443,51,0	1/1:1,17:18:47.99:417,48,0	1/1:2,14:16:41.89:354,42,0	0/0:28,0:28:78.18:0,78,845	0/0:28,0:28:72.18:0,72,787	0/0:16,0:16:48.13:0,48,531	0/0:3,0:3:6.02:0,6,66
chr10	73756353	.	CAA	C	7669.22	PASS	AB=0.875;AC=54;AF=0.964;AN=56;BaseQRankSum=-3.817;DP=275;FS=5.553;HRun=5;HaplotypeScore=38.1090;InbreedingCoeff=-0.0121;MQ=62.36;MQ0=6;MQRankSum=-3.744;QD=27.89;ReadPosRankSum=2.997;VQSLOD=2.8052;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:15:18.06:251,18,0	1/1:0,4:3:9.03:126,9,0	0/1:6,3:6:16.96:90,0,17	0/1:6,0:5:10.77:11,0,53	1/1:0,10:9:21.07:294,21,0	1/1:2,13:11:18.06:252,18,0	1/1:1,2:3:3.01:42,3,0	1/1:2,16:18:45.12:596,45,0	1/1:1,6:6:12.04:168,12,0	1/1:1,3:2:6.01:68,6,0	1/1:2,8:10:24.08:332,24,0	1/1:0,11:11:24.08:336,24,0	1/1:0,10:10:24.08:336,24,0	1/1:0,10:10:30.10:420,30,0	1/1:1,7:7:18.06:252,18,0	1/1:1,12:13:30.10:420,30,0	1/1:2,14:15:33.11:462,33,0	1/1:0,7:7:21.07:294,21,0	1/1:1,7:6:15.03:177,15,0	1/1:2,11:10:12.04:168,12,0	1/1:0,8:8:12.04:168,12,0	1/1:0,4:4:12.04:168,12,0	1/1:0,9:9:24.08:336,24,0	1/1:0,5:5:6.02:84,6,0	1/1:3,14:17:51.14:664,51,0	1/1:1,13:13:36.11:487,36,0	1/1:1,11:12:33.11:462,33,0	1/1:0,7:5:15.05:210,15,0
chr10	73756367	.	A	AAT	532.52	PASS	AB=1.000;AC=5;AF=0.093;AN=54;BaseQRankSum=0.974;DP=260;FS=9.455;HRun=0;HaplotypeScore=60.0609;InbreedingCoeff=0.4434;MQ=54.14;MQ0=15;MQRankSum=-5.699;QD=14.79;ReadPosRankSum=-0.010;VQSLOD=2.2248;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:13:18.02:0,18,209	0/0:5,0:4:12.04:0,12,151	./.	0/0:5,0:4:3.01:0,3,31	0/0:10,0:9:24.08:0,24,303	0/0:13,0:10:21.02:0,21,245	0/0:1,0:1:3.01:0,3,38	0/0:27,0:17:21.07:0,21,265	0/0:5,0:4:12.04:0,12,151	0/0:3,2:3:3.01:0,3,38	1/1:3,6:9:4.13:276,4,0	0/0:7,0:7:12.04:0,12,151	0/0:7,0:7:15.05:0,15,189	0/0:10,0:10:15.05:0,15,188	0/0:7,0:6:15.05:0,15,189	0/0:12,0:12:21.05:0,21,250	0/0:17,0:17:33.11:0,33,416	0/1:10,0:9:24.06:24,0,206	0/0:9,0:4:12.04:0,12,151	0/0:8,0:5:12.03:0,12,140	0/0:5,0:5:9.03:0,9,114	0/0:4,0:4:6.02:0,6,75	0/0:9,0:9:21.07:0,21,264	0/0:3,0:3:6.02:0,6,73	1/1:10,7:17:21.07:348,21,0	0/0:13,0:12:30.10:0,30,378	0/0:13,0:12:36.08:0,36,437	0/0:7,0:5:15.04:0,15,177
chr10	73756392	.	A	AAT	381.44	PASS	AB=0.700;AC=3;AF=0.060;AN=50;BaseQRankSum=2.267;DP=238;FS=0.000;HRun=0;HaplotypeScore=40.1661;InbreedingCoeff=0.2574;MQ=51.01;MQ0=21;MQRankSum=-1.899;QD=25.43;ReadPosRankSum=-2.046;VQSLOD=3.3786;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:12:9.03:0,9,113	0/0:8,0:7:18.06:0,18,227	0/0:6,0:1:3:0,3,27	0/0:6,0:4:2.50:0,2,10	0/0:8,0:7:18.06:0,18,227	0/0:12,0:9:15.04:0,15,177	./.	0/0:45,0:32:93.27:0,93,1147	0/0:6,0:5:9.03:0,9,114	1/1:0,7:8:21.07:349,21,0	0/1:4,3:6:25.75:134,0,26	0/0:1,0:1:3:0,3,25	0/0:5,0:4:9.03:0,9,114	0/0:3,0:3:9.03:0,9,113	0/0:5,0:4:9.03:0,9,114	0/0:5,0:5:12.04:0,12,151	0/0:15,0:15:30.10:0,30,379	0/0:12,0:9:9.03:0,9,111	0/0:14,0:9:24.06:0,24,290	0/0:5,0:2:6.02:0,6,76	0/0:3,0:3:6.02:0,6,76	./.	0/0:3,0:3:9.03:0,9,114	./.	0/0:5,3:8:0.52:0,1,68	0/0:15,0:14:33.11:0,33,416	0/0:13,0:12:24.06:0,24,288	0/0:8,0:6:6.02:0,6,76
chr10	73757150	.	A	AAT	463.76	PASS	AB=1.000;AC=11;AF=0.220;AN=50;BaseQRankSum=4.842;DP=214;FS=0.958;HRun=0;HaplotypeScore=34.0741;InbreedingCoeff=0.5658;MQ=63.01;MQ0=0;MQRankSum=0.770;QD=14.96;ReadPosRankSum=-0.957;VQSLOD=2.8537;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:9:3.57:0,4,80	0/0:2,0:2:3.01:0,3,38	0/0:7,0:4:1.63:0,2,22	0/0:8,0:3:2.90:0,3,16	0/0:7,0:7:12.03:0,12,137	0/0:12,0:12:30.07:0,30,360	0/0:3,0:3:9.03:0,9,110	0/0:34,0:34:78.23:0,78,961	./.	1/1:1,4:5:12.04:197,12,0	1/1:4,3:7:6.02:97,6,0	./.	1/1:4,0:4:5.05:19,5,0	0/0:3,0:3:9.02:0,9,101	0/0:3,0:3:9.03:0,9,113	0/0:6,0:6:9.03:0,9,113	0/0:20,0:20:54.10:0,54,641	0/0:12,0:12:15.19:0,15,128	0/0:10,0:10:27.08:0,27,327	0/0:4,0:4:6.01:0,6,62	0/0:8,0:8:21.03:0,21,234	./.	1/1:3,0:3:0.03:0,0,0	0/1:3,0:3:4.87:5,0,31	1/1:5,4:9:21.02:281,21,0	0/0:10,0:10:15.04:0,15,175	0/0:6,0:6:9.02:0,9,100	0/0:19,0:19:42.13:0,42,523
chr10	73757164	.	C	CAT	1147.42	PASS	AB=1.000;AC=18;AF=0.346;AN=52;BaseQRankSum=4.034;DP=231;FS=3.755;HRun=0;HaplotypeScore=34.9851;InbreedingCoeff=0.7048;MQ=62.45;MQ0=0;MQRankSum=2.304;QD=17.13;ReadPosRankSum=1.044;VQSLOD=3.2281;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:11.26:229,0,11	0/0:1,0:1:2.99:0,3,24	0/1:10,0:6:0.01:0,0,0	0/0:8,0:5:0:0,0,0	0/0:5,0:5:15.03:0,15,174	0/0:16,0:16:36.05:0,36,404	0/0:4,0:4:9.03:0,9,112	0/0:39,0:39:87.19:0,87,989	./.	1/1:2,3:5:6.84:188,7,0	1/1:3,2:5:12.04:190,12,0	1/1:2,0:2:5.99:68,6,0	1/1:1,4:5:6.02:99,6,0	0/0:6,0:6:15.02:0,15,160	0/0:5,0:5:12.04:0,12,150	0/0:5,0:5:12.03:0,12,137	0/0:21,0:21:60.17:0,60,731	1/1:3,0:9:12:106,12,0	0/0:14,0:14:33.10:0,33,411	0/0:3,0:3:9.02:0,9,100	0/0:9,0:9:17.53:0,18,183	./.	1/1:1,2:3:6.02:99,6,0	1/1:1,2:3:6.02:99,6,0	1/1:1,7:10:15.05:242,15,0	0/0:8,0:8:21.05:0,21,238	0/0:4,0:4:12.04:0,12,150	0/0:16,0:16:36.07:0,36,419
chr10	73759500	.	G	GA	614.75	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.586;DP=687;FS=7.765;HRun=6;HaplotypeScore=66.3689;InbreedingCoeff=0.9875;MQ=89.45;MQ0=0;MQRankSum=-3.832;QD=25.61;ReadPosRankSum=2.610;VQSLOD=3.9550;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.16:0,81,818	0/0:8,0:8:21.04:0,21,214	0/0:32,0:33:65.76:0,66,655	0/0:18,0:19:37.94:0,38,370	0/0:31,0:31:90.20:0,90,918	0/0:24,0:24:69.16:0,69,704	0/0:18,0:18:51.11:0,51,520	0/0:28,0:27:75.17:0,75,765	0/0:22,0:22:60.13:0,60,612	0/0:38,0:38:99:0,111,1133	0/0:21,0:21:60.14:0,60,612	0/0:33,0:33:96.22:0,96,979	0/0:33,0:33:90.20:0,90,918	0/0:26,0:26:66.15:0,66,673	0/0:25,0:25:75.17:0,75,765	0/0:38,0:38:96.21:0,96,980	0/0:28,0:28:81.18:0,81,826	1/1:4,20:24:53.43:710,53,0	0/0:24,0:24:57.10:0,57,575	0/0:25,0:25:72.15:0,72,728	0/0:20,0:20:57.13:0,57,581	0/0:13,0:13:33.07:0,33,336	0/0:32,0:32:87.19:0,87,887	0/0:25,0:25:72.16:0,72,734	0/0:13,0:13:33.07:0,33,337	0/0:22,0:22:66.14:0,66,668	0/0:28,0:28:78.18:0,78,795	0/0:6,0:6:18.04:0,18,184
chr10	73761984	.	CG	C	1237.01	PASS	AB=1.000;AC=21;AF=0.389;AN=54;BaseQRankSum=-0.060;DP=336;FS=10.192;HRun=2;HaplotypeScore=39.9977;InbreedingCoeff=0.8431;MQ=43.49;MQ0=24;MQRankSum=1.275;QD=11.89;ReadPosRankSum=-0.011;VQSLOD=0.7599;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:14:27.13:196,27,0	0/0:4,0:3:5.99:0,6,50	./.	0/0:15,0:1:0:0,0,0	0/0:18,0:14:34.05:0,34,316	0/0:13,0:11:27.02:0,27,274	0/0:14,0:14:26.93:0,27,240	0/0:15,0:12:27.29:0,27,196	0/0:4,0:3:6.01:0,6,68	1/1:10,0:11:26.84:233,27,0	1/1:9,0:8:17.02:136,17,0	1/1:16,0:16:34.89:275,35,0	1/1:4,0:4:9.01:82,9,0	0/0:13,0:13:29.93:0,30,276	0/0:14,0:13:38.93:0,39,363	0/0:8,0:8:20.74:0,21,194	0/0:17,0:15:35.46:0,35,403	1/1:6,0:3:5.77:34,6,0	0/0:22,0:21:48.76:0,49,403	0/1:11,0:11:2.19:2,0,183	0/0:10,0:7:17.97:0,18,163	1/1:7,1:8:21.02:193,21,0	1/1:3,1:4:7.83:67,8,0	1/1:8,0:7:9:78,9,0	1/1:6,4:9:15.95:141,16,0	0/0:14,0:14:29.96:0,30,295	0/0:13,0:13:26.51:0,27,250	0/0:16,0:12:32.92:0,33,339
chr10	73762007	.	CA	C	253.44	PASS	AB=0.911;AC=10;AF=0.179;AN=56;BaseQRankSum=-0.250;DP=582;FS=1.260;HRun=14;HaplotypeScore=110.1095;InbreedingCoeff=0.0337;MQ=48.72;MQ0=34;MQRankSum=-3.538;QD=1.10;ReadPosRankSum=-0.263;VQSLOD=-0.0213;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:15:11.37:0,11,70	0/0:8,0:7:13.45:0,13,98	0/0:67,1:12:10.19:0,10,133	0/1:76,3:15:3.15:3,0,37	0/1:25,1:23:15.30:15,0,252	0/1:11,1:11:4.82:5,0,66	0/0:16,0:16:20.48:0,20,207	0/0:23,0:22:30.15:0,30,206	0/0:8,0:7:16.78:0,17,111	1/1:13,7:20:9.68:131,10,0	0/1:16,4:20:25.51:74,0,26	0/0:12,0:12:16.36:0,16,80	0/0:8,0:10:15.13:0,15,84	0/0:19,1:20:9.26:0,9,208	0/0:11,0:10:21.11:0,21,136	0/0:14,0:16:34.65:0,35,272	0/0:24,0:22:27.96:0,28,247	0/0:12,0:9:11.91:0,12,98	0/0:24,1:21:14.45:0,14,200	0/0:27,1:28:9.17:0,9,289	0/0:8,0:5:9.91:0,10,59	0/0:11,0:12:19.26:0,19,104	0/0:6,0:9:10.26:0,10,72	0/1:6,0:6:5.06:5,0,9	0/1:15,12:24:17.69:126,0,18	0/1:17,0:17:11.13:11,0,138	0/0:16,1:17:21.07:0,21,150	0/1:16,1:15:17.82:18,0,76
chr10	73762039	.	A	AAAACAAAAC	731.03	PASS	AB=0.951;AC=6;AF=0.107;AN=56;BaseQRankSum=2.889;DP=566;FS=36.635;HRun=0;HaplotypeScore=180.3542;InbreedingCoeff=-0.0920;MQ=53.44;MQ0=26;MQRankSum=-4.041;QD=5.15;ReadPosRankSum=1.970;VQSLOD=1.2830;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,6:16:10.71:727,0,11	0/0:8,0:8:12.04:0,12,356	0/1:72,0:13:5.80:6,0,190	0/0:81,0:14:12.67:0,13,52	0/0:23,0:21:57.17:0,57,1144	0/0:16,0:14:29.88:0,30,460	0/0:15,0:15:37.94:0,38,642	0/0:24,0:22:48.79:0,49,727	0/0:6,0:5:14.26:0,14,316	0/0:16,0:16:12.06:0,12,255	0/1:22,0:22:22.25:22,0,362	0/1:13,0:13:26.37:26,0,289	0/1:9,0:9:61.21:61,0,126	0/0:15,0:15:45.04:0,45,737	0/0:14,0:13:28.90:0,29,609	0/0:18,0:18:42.13:0,42,902	0/0:18,0:18:47.90:0,48,925	0/1:7,0:6:1.74:2,0,118	0/0:28,0:25:62.10:0,62,960	0/0:28,0:28:78.14:0,78,1601	0/0:7,0:7:15.01:0,15,333	0/0:12,0:11:19.60:0,20,220	0/0:13,0:10:12.33:0,12,214	0/0:5,0:3:4.57:0,5,48	0/0:23,0:22:16.14:0,16,426	0/0:23,0:22:53.94:0,54,925	0/0:21,0:21:47.78:0,48,861	0/0:10,0:10:30.08:0,30,642
chr10	73763387	.	C	CTG	5286.61	PASS	AB=0.569;AC=15;AF=0.268;AN=56;BaseQRankSum=-6.561;DP=858;FS=8.536;HRun=0;HaplotypeScore=119.4077;InbreedingCoeff=0.7423;MQ=65.54;MQ0=11;MQRankSum=0.809;QD=22.69;ReadPosRankSum=1.470;VQSLOD=5.1199;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:74.96:0,75,885	0/0:9,0:10:23.91:0,24,269	0/0:55,0:25:40.56:0,41,414	0/0:66,0:27:38.28:0,38,344	0/0:25,0:25:51.13:0,51,604	0/0:26,0:26:54.16:0,54,655	0/0:23,0:24:47.96:0,48,547	0/0:47,0:49:84.19:0,84,1076	0/0:18,0:18:42.11:0,42,497	1/1:24,0:24:46.95:217,47,0	1/1:24,0:24:20.37:124,20,0	0/1:9,26:34:36.92:944,0,37	1/1:8,25:33:23.83:882,24,0	0/0:20,2:22:5.79:0,6,558	0/0:33,1:35:29.84:0,30,861	0/0:38,0:39:81.03:0,81,942	0/0:33,0:35:89.84:0,90,1001	1/1:7,20:26:30.91:802,31,0	0/0:23,0:25:50.09:0,50,544	0/0:31,0:33:92.94:0,93,1072	0/0:34,0:36:80.87:0,81,907	0/1:4,12:16:3.28:451,0,3	0/1:6,21:27:15.59:766,0,16	1/1:5,24:29:60.20:968,60,0	1/1:18,0:18:23:133,23,0	0/0:36,0:38:40.32:0,40,780	0/0:34,0:36:78.02:0,78,906	0/0:10,0:11:20.93:0,21,349
chr10	73763397	.	G	GTCTGTC	3119.71	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.667;DP=903;FS=5.590;HRun=0;HaplotypeScore=191.0779;InbreedingCoeff=0.9977;MQ=57.03;MQ0=24;MQRankSum=-4.296;QD=39.49;ReadPosRankSum=-1.111;VQSLOD=2.9716;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:72.22:0,72,1941	0/0:11,0:11:33.10:0,33,679	0/0:85,0:26:62.55:0,63,1225	0/0:86,0:25:56.81:0,57,916	0/0:24,0:24:66.18:0,66,1411	0/0:23,0:23:69.17:0,69,1476	0/0:21,0:21:60.19:0,60,1318	0/0:53,0:53:99:0,141,3017	0/0:18,0:18:51.14:0,51,1123	1/1:1,24:31:74.99:1850,75,0	1/1:0,23:25:21.07:686,21,0	0/0:32,0:31:81.11:0,81,928	0/0:30,0:30:72.05:0,72,752	0/0:25,0:25:69.22:0,69,1499	0/0:34,0:34:96.29:0,96,2110	0/0:31,0:31:90.29:0,90,2060	0/0:34,0:34:96.31:0,96,2191	0/0:26,0:25:63.11:0,63,642	0/0:24,0:24:62.94:0,63,1276	0/0:34,0:34:99:0,99,2301	0/0:37,0:37:99:0,108,2252	0/0:17,0:17:45.05:0,45,513	0/0:30,0:30:71.52:0,72,808	0/0:29,0:29:72.06:0,72,680	1/1:2,18:23:23.99:726,24,0	0/0:34,0:35:49.70:0,50,2053	0/0:33,0:33:87.28:0,87,1985	0/0:15,0:15:44.83:0,45,868
chr10	73763585	.	AT	A	1061.64	PASS	AB=0.893;AC=9;AF=0.161;AN=56;BaseQRankSum=7.374;DP=544;FS=0.000;HRun=11;HaplotypeScore=56.9642;InbreedingCoeff=0.5715;MQ=70.33;MQ0=1;MQRankSum=-0.835;QD=9.31;ReadPosRankSum=1.122;VQSLOD=2.2664;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:75.14:0,75,776	0/1:10,2:12:19.21:19,0,226	0/0:11,0:10:10.24:0,10,64	0/0:10,0:8:7.84:0,8,51	0/0:28,0:28:27:0,27,481	0/0:24,0:26:62.93:0,63,633	0/1:18,2:22:14.07:14,0,440	0/0:26,0:26:66.57:0,67,676	0/0:9,0:9:27.07:0,27,288	1/1:6,17:23:50.91:416,51,0	1/1:3,12:15:35.94:295,36,0	0/0:21,0:21:57.11:0,57,587	0/0:11,0:11:33.07:0,33,340	0/0:22,0:22:54.07:0,54,550	0/0:20,1:21:20.43:0,20,400	0/0:15,0:15:30.96:0,31,322	0/0:42,0:45:99:0,117,1177	0/1:17,2:19:1.18:1,0,380	0/0:18,0:18:23.32:0,23,421	0/0:18,0:18:42.09:0,42,440	0/0:21,2:23:8.31:0,8,488	0/0:11,1:14:1.42:0,1,240	0/0:13,0:14:31.19:0,31,305	0/0:8,0:9:17.88:0,18,174	1/1:3,20:23:56.92:468,57,0	0/0:23,2:25:29.50:0,30,519	0/0:22,0:24:59.90:0,60,598	0/0:9,0:9:27.05:0,27,280
chr10	73765344	.	G	GTT	1925.27	PASS	AB=0.913;AC=24;AF=0.429;AN=56;BaseQRankSum=3.397;DP=543;FS=0.946;HRun=15;HaplotypeScore=93.7734;InbreedingCoeff=0.5212;MQ=73.91;MQ0=2;MQRankSum=-1.576;QD=5.91;ReadPosRankSum=-3.736;VQSLOD=-0.3846;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:25:34.25:0,34,320	0/0:11,0:13:7.14:0,7,96	0/1:26,0:16:0.84:1,0,61	0/1:19,0:12:23.97:27,0,24	0/1:24,0:28:43.71:44,0,187	0/0:15,0:15:3.72:0,4,80	0/0:7,0:10:11.67:0,12,130	0/1:24,1:32:36.72:37,0,131	0/0:10,0:10:10.93:0,11,113	1/1:14,14:34:56.82:541,57,0	1/1:11,8:21:29.74:253,30,0	1/1:10,0:10:10.81:86,11,0	1/1:11,0:17:15.45:135,15,0	0/0:16,0:19:20.21:0,20,190	0/0:16,0:17:22.18:0,22,163	0/0:8,0:9:17.61:0,18,128	0/0:25,0:29:40.85:0,41,432	1/1:1,7:11:20.40:210,20,0	0/0:13,0:14:11.06:0,11,109	0/0:19,0:22:40.23:0,40,278	0/0:12,0:15:13.94:0,14,196	1/1:18,0:17:18:138,18,0	1/1:22,1:23:19.86:205,20,0	1/1:1,0:8:9.01:85,9,0	1/1:3,12:21:28.81:299,29,0	0/1:23,1:28:35.45:35,0,216	0/1:19,0:29:31.87:32,0,207	0/0:16,0:18:14.41:0,14,157
chr10	73769633	.	GGAA	G	4310.92	PASS	AB=0.889;AC=13;AF=0.232;AN=56;BaseQRankSum=12.751;DP=737;FS=0.394;HRun=0;HaplotypeScore=103.9187;InbreedingCoeff=0.8697;MQ=62.43;MQ0=2;MQRankSum=0.140;QD=24.92;ReadPosRankSum=3.553;VQSLOD=4.9438;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,99,1919	0/0:13,0:13:5.20:0,5,501	0/0:19,0:14:31.35:0,31,465	0/0:15,0:9:24.08:0,24,433	0/0:25,0:25:66.18:0,66,1201	0/0:21,0:21:54.15:0,54,1023	0/0:26,0:26:69.17:0,69,1312	0/0:40,0:40:84.29:0,84,1587	0/0:17,0:17:33.11:0,33,665	0/0:32,0:32:87.30:0,87,1720	0/0:17,0:17:39.12:0,39,731	1/1:2,17:18:42.02:614,42,0	1/1:4,23:27:57.03:827,57,0	0/0:26,0:26:72.22:0,72,1384	0/0:32,0:32:72.23:0,72,1414	0/0:31,0:31:90.28:0,90,1680	0/0:24,0:24:45.15:0,45,909	1/1:4,22:26:48.16:702,48,0	0/1:21,3:24:30.50:30,0,906	0/0:34,0:34:90.31:0,90,1736	0/0:45,0:45:99:0,111,2208	1/1:5,23:27:60.20:868,60,0	1/1:6,13:19:33.11:483,33,0	1/1:6,24:30:54.18:785,54,0	0/0:25,1:26:10.29:0,10,976	0/0:27,0:27:54.18:0,54,1018	0/0:30,0:30:78.27:0,78,1563	0/0:24,0:24:66.18:0,66,1305
chr10	73770875	.	TTGAC	T	922.68	PASS	AB=1.000;AC=6;AF=0.111;AN=54;BaseQRankSum=2.688;DP=526;FS=4.624;HRun=0;HaplotypeScore=116.6647;InbreedingCoeff=0.5715;MQ=82.47;MQ0=4;MQRankSum=0.627;QD=18.83;ReadPosRankSum=0.315;VQSLOD=3.1261;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:36.06:0,36,494	0/0:6,0:6:18.06:0,18,341	0/0:35,0:23:20.89:0,21,537	0/0:48,0:25:17.80:0,18,207	0/0:22,0:22:57.19:0,57,1006	0/0:8,0:8:12.04:0,12,199	0/0:17,0:17:32.12:0,32,683	0/0:28,0:28:48.16:0,48,796	0/0:14,0:14:30.09:0,30,504	0/0:25,0:25:66.21:0,66,1153	0/0:24,0:24:51.15:0,51,799	0/1:5,0:5:8.38:51,0,8	1/1:6,0:6:11.81:113,12,0	0/0:16,0:16:36.12:0,36,701	0/0:17,0:17:36.09:0,36,555	0/0:18,0:18:49.01:0,49,800	0/0:28,0:28:69.22:0,69,1203	1/1:19,0:19:37.08:556,37,0	0/0:19,0:19:33.10:0,33,555	0/0:25,0:25:60.19:0,60,1007	0/0:12,0:12:24.06:0,24,423	./.	0/0:4,11:14:2.86:0,3,21	0/1:19,0:19:45.67:334,0,46	0/0:17,0:17:39.10:0,39,660	0/0:14,0:14:27.08:0,27,418	0/0:26,0:26:60.20:0,60,1112	0/0:10,0:10:9.03:0,9,169
chr10	73770887	.	CTGACAGAGAG	C	886.12	PASS	AB=0.957;AC=4;AF=0.071;AN=56;BaseQRankSum=0.782;DP=535;FS=0.000;HRun=0;HaplotypeScore=160.6383;InbreedingCoeff=0.3406;MQ=73.57;MQ0=19;MQRankSum=-0.305;QD=21.10;ReadPosRankSum=0.952;VQSLOD=2.9918;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:17:36.06:0,36,547	0/0:7,0:7:21.07:0,21,724	0/0:59,0:20:28.18:0,28,618	0/0:68,0:22:27.07:0,27,252	0/0:22,0:22:60.21:0,60,1360	0/0:8,0:8:15.05:0,15,254	0/0:17,0:15:37.07:0,37,1241	0/0:19,0:18:54.17:0,54,872	0/0:14,0:14:30.09:0,30,661	0/0:27,0:27:14.66:0,15,1455	0/0:18,0:18:51.15:0,51,900	0/0:3,0:3:6.49:0,6,83	0/1:5,0:5:13.41:13,0,81	0/0:21,0:20:45.15:0,45,1214	0/0:14,0:14:36.09:0,36,885	0/0:20,0:19:54.14:0,54,1276	0/0:29,0:29:75.24:0,75,2010	1/1:12,4:16:31.43:787,31,0	0/0:14,0:13:39.12:0,39,747	0/0:23,0:23:59.97:0,60,1269	0/0:13,0:13:27.56:0,28,655	0/0:13,0:13:2.98:0,3,90	0/0:14,0:13:2.91:0,3,99	0/1:19,0:21:99:199,0,432	0/0:15,0:14:39.12:0,39,844	0/0:12,0:12:33.10:0,33,575	0/0:21,0:21:63.13:0,63,1769	0/0:3,0:3:9.03:0,9,273
chr10	73770956	.	GGAA	G	766.06	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=3.155;DP=438;FS=0.000;HRun=0;HaplotypeScore=62.2187;InbreedingCoeff=0.6313;MQ=46.21;MQ0=26;MQRankSum=-3.622;QD=13.93;ReadPosRankSum=-2.773;VQSLOD=2.3838;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:31.77:0,32,591	0/0:7,0:7:18.02:0,18,320	0/0:67,0:10:23.76:0,24,372	0/0:66,0:15:31.45:0,31,440	0/0:8,0:7:18.05:0,18,338	0/0:10,0:9:23.95:0,24,506	0/0:21,0:21:60.21:0,60,1332	0/0:17,0:17:45.11:0,45,869	0/0:15,0:14:20.99:0,21,420	1/1:2,16:18:37.43:581,37,0	1/1:0,9:8:8.99:119,9,0	0/1:12,0:12:23.44:23,0,171	0/0:9,0:9:15.82:0,16,143	0/0:12,0:11:24.88:0,25,490	0/0:11,0:10:10.62:0,11,416	0/0:6,0:6:18.06:0,18,400	0/0:10,0:8:17.97:0,18,309	0/1:6,0:5:8.97:9,0,80	0/0:14,0:13:30.96:0,31,559	0/0:8,0:8:21.07:0,21,476	0/0:17,0:12:27.01:0,27,479	0/0:13,0:13:4.05:0,4,167	0/0:10,0:9:21.02:0,21,202	0/0:15,0:13:18.48:0,18,167	1/1:7,3:10:11.15:177,11,0	0/0:14,0:13:39.13:0,39,879	0/0:8,0:8:21.07:0,21,408	0/0:9,0:8:21.07:0,21,369
chr10	73773018	.	TA	T	2199.67	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.488;DP=689;FS=4.456;HRun=3;HaplotypeScore=65.8160;InbreedingCoeff=1.0000;MQ=83.10;MQ0=0;MQRankSum=1.738;QD=33.33;ReadPosRankSum=2.204;VQSLOD=4.2185;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:75.25:0,75,1079	0/0:14,0:14:42.14:0,42,605	0/0:25,0:25:63.22:0,63,965	0/0:25,0:25:66.21:0,66,896	0/0:35,0:35:99:0,99,1424	0/0:26,0:26:75.25:0,75,1063	0/0:26,0:26:75.21:0,75,1034	0/0:34,0:34:90.28:0,90,1260	0/0:25,0:25:75.23:0,75,1056	1/1:0,23:23:66.21:818,66,0	1/1:0,19:19:54.17:669,54,0	0/0:27,0:27:75.24:0,75,1060	0/0:21,0:20:60.20:0,60,851	0/0:21,0:21:60.20:0,60,864	0/0:26,0:26:75.23:0,75,1042	0/0:23,0:23:66.21:0,66,933	0/0:33,0:33:90.29:0,90,1276	0/0:28,0:28:75.25:0,75,1073	0/0:16,0:16:45.13:0,45,615	0/0:19,0:19:57.19:0,57,812	0/0:32,0:32:93.31:0,93,1339	0/0:21,0:21:57.19:0,57,819	0/0:21,0:21:60.20:0,60,864	0/0:21,0:21:63.21:0,63,880	1/1:0,24:24:69.22:855,69,0	0/0:32,0:32:93.30:0,93,1317	0/0:29,0:28:84.27:0,84,1190	0/0:16,0:16:48.14:0,48,672
chr10	73773083	.	T	TTCTC	878.71	PASS	AB=1.000;AC=18;AF=0.360;AN=50;BaseQRankSum=4.247;DP=570;FS=3.915;HRun=0;HaplotypeScore=125.2679;InbreedingCoeff=0.6597;MQ=67.89;MQ0=8;MQRankSum=-2.897;QD=4.07;ReadPosRankSum=-1.866;VQSLOD=1.6864;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:6.02:97,6,0	0/0:6,0:6:2.86:0,3,44	./.	0/1:39,0:19:0:0,0,0	0/0:20,0:20:15.05:0,15,200	0/0:17,0:17:14.34:0,14,182	0/0:24,0:24:26.59:0,27,374	0/0:31,0:30:8.04:0,8,71	0/0:21,0:21:18.84:0,19,255	1/1:14,0:13:15.03:195,15,0	./.	1/1:23,0:22:11.69:188,12,0	1/1:18,0:16:12.03:162,12,0	0/0:17,0:17:9.03:0,9,134	1/1:20,0:20:2.94:34,3,0	0/1:21,0:21:26.17:121,0,26	0/0:29,0:27:27.06:0,27,361	1/1:19,0:20:9.50:126,10,0	0/0:28,0:28:14.63:0,15,234	0/0:14,0:14:12.04:0,12,170	0/0:20,0:20:23.91:0,24,294	1/1:13,9:22:3.01:71,3,0	./.	0/0:15,0:12:0:0,0,0	1/1:18,0:18:3.01:50,3,0	0/0:21,0:21:14.86:0,15,200	0/0:17,0:17:16.58:0,17,183	0/0:20,0:22:26.89:0,27,291
chr10	73773123	.	C	CTG	199.38	PASS	AB=0.963;AC=18;AF=0.375;AN=48;BaseQRankSum=2.625;DP=503;FS=8.183;HRun=0;HaplotypeScore=103.7600;InbreedingCoeff=0.1297;MQ=44.10;MQ0=25;MQRankSum=-0.284;QD=0.67;ReadPosRankSum=-0.400;VQSLOD=1.0434;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,5:20:2.96:0,3,19	0/0:4,0:4:3.46:0,3,24	./.	./.	0/0:21,0:20:2.99:0,3,23	0/1:19,0:19:2.77:3,0,91	0/1:24,0:23:2.45:2,0,83	1/1:27,0:21:2.62:11,3,0	0/0:18,0:18:14.61:0,15,110	0/1:11,0:10:3:3,0,28	./.	1/1:30,0:29:6.94:144,7,0	1/1:17,0:15:3.13:56,3,0	0/0:16,0:15:14.49:0,14,99	0/0:22,0:21:10.89:0,11,227	0/1:20,0:20:21.26:21,0,127	0/0:32,0:29:41.72:0,42,315	0/0:11,0:17:8.32:0,8,38	0/1:16,0:15:2.02:2,0,15	0/0:16,0:16:6.46:0,6,50	0/1:32,0:34:8.96:9,0,116	1/1:14,0:13:6.46:49,6,0	0/1:21,0:17:0:0,0,0	0/1:10,7:13:0:0,0,0	./.	0/1:23,0:23:13.82:14,0,220	0/0:19,0:19:26.73:0,27,191	0/1:22,0:20:16.14:16,0,167
chr10	73773153	.	G	GTC	1377.79	PASS	AB=0.950;AC=18;AF=0.321;AN=56;BaseQRankSum=1.703;DP=555;FS=12.779;HRun=0;HaplotypeScore=85.8560;InbreedingCoeff=0.7521;MQ=46.55;MQ0=23;MQRankSum=2.750;QD=7.78;ReadPosRankSum=-0.836;VQSLOD=2.2248;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:23:17.17:184,17,0	0/0:4,0:4:11.88:0,12,104	0/0:24,0:11:26.93:0,27,238	0/0:31,0:9:26.93:0,27,238	0/0:16,0:16:11.96:0,12,113	0/0:17,0:17:28.83:0,29,293	0/0:23,0:21:41.31:0,41,402	0/0:20,0:17:25.99:0,26,284	0/0:17,0:17:31.81:0,32,314	1/1:12,0:11:0.42:125,0,0	1/1:8,0:7:2.56:25,3,0	1/1:23,1:24:29.90:401,30,0	0/1:16,2:17:1.50:233,0,1	0/0:16,0:16:35.99:0,36,362	0/0:23,0:22:48.06:0,48,550	0/0:24,0:24:55.83:0,56,531	0/0:34,0:32:77.93:0,78,836	1/1:18,0:18:8.87:155,9,0	0/0:14,0:12:26.42:0,26,188	0/0:8,0:8:7.90:0,8,111	0/0:37,0:36:50.60:0,51,505	0/1:15,0:14:2.68:175,0,3	1/1:7,13:16:0.47:1,0,0	1/1:21,2:20:23.94:191,24,0	1/1:13,0:13:8.95:68,9,0	0/0:23,0:23:45.65:0,46,533	0/0:24,0:24:64.95:0,65,620	0/0:23,0:21:19.40:0,19,459
chr10	73778980	.	CTTG	C	7518.62	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.995;DP=771;FS=2.390;HRun=0;HaplotypeScore=114.1778;InbreedingCoeff=0.9972;MQ=78.49;MQ0=0;MQRankSum=-2.035;QD=42.72;ReadPosRankSum=4.699;VQSLOD=6.3914;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:67,0:67:99:0,196,4541	0/0:9,0:9:24.08:0,24,563	0/0:21,0:21:53.85:0,54,1194	0/0:19,0:19:51.17:0,51,1019	0/0:26,0:26:78.25:0,78,1783	0/0:24,0:24:72.25:0,72,1675	0/0:25,0:25:72.25:0,72,1676	0/0:36,0:36:99:0,103,2246	0/0:31,0:31:90.31:0,90,2128	1/1:0,22:22:63.20:1080,63,0	1/1:0,10:10:18.06:300,18,0	1/1:0,31:31:81.28:1429,81,0	1/1:0,33:33:93.32:1640,93,0	0/0:39,0:39:99:0,117,2722	0/0:49,0:49:99:0,144,3301	0/0:50,0:50:99:0,148,3470	0/0:34,0:34:99:0,102,2378	0/0:19,0:19:57.15:0,57,1281	0/0:19,0:19:57.18:0,57,1256	0/0:17,0:17:51.18:0,51,1193	0/0:36,0:36:99:0,105,2403	1/1:0,11:11:21.07:370,21,0	1/1:1,14:15:33.11:582,33,0	1/1:0,29:29:57.19:1006,57,0	1/1:0,25:25:63.22:1111,63,0	0/0:31,0:31:93.32:0,93,2180	0/0:35,0:34:99:0,105,2481	0/0:8,0:8:24.08:0,24,568
chr10	73782636	.	G	GT	1829.23	PASS	AB=0.938;AC=7;AF=0.125;AN=56;BaseQRankSum=-8.594;DP=577;FS=0.977;HRun=10;HaplotypeScore=55.5649;InbreedingCoeff=0.7273;MQ=63.56;MQ0=1;MQRankSum=-0.116;QD=20.32;ReadPosRankSum=2.322;VQSLOD=4.6009;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:42.43:0,42,472	0/0:12,0:12:32.96:0,33,271	0/0:12,0:10:3.86:0,4,109	0/0:12,0:8:20.95:0,21,167	0/0:26,0:27:61.93:0,62,495	0/0:27,0:27:68.89:0,69,565	0/0:14,0:15:40.98:0,41,325	0/0:29,0:29:61.70:0,62,494	0/0:12,0:12:32.96:0,33,271	1/1:1,21:22:60.15:639,60,0	1/1:3,26:29:80.87:843,81,0	0/0:16,0:16:44.93:0,45,366	0/0:18,1:19:18.86:0,19,354	0/0:17,0:18:49.98:0,50,400	0/0:24,0:24:65.83:0,66,536	0/0:20,0:20:44.92:0,45,369	0/0:26,0:26:65.90:0,66,542	0/0:30,0:30:71.88:0,72,588	0/0:13,1:14:6.97:0,7,264	0/0:25,0:25:65.91:0,66,542	0/0:12,0:12:32.95:0,33,269	0/0:13,0:13:38.96:0,39,320	0/0:21,1:23:2.93:0,3,325	0/0:10,0:10:29.97:0,30,246	1/1:4,19:24:26.32:470,26,0	0/0:28,2:30:17.51:0,18,546	0/0:32,0:34:81.95:0,82,652	0/1:14,1:15:25.46:25,0,161
chr10	73782831	.	A	ATTAC	15971.87	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-16.203;DP=676;FS=11.503;HRun=0;HaplotypeScore=94.1855;InbreedingCoeff=0.9223;MQ=70.46;MQ0=3;MQRankSum=-4.801;QD=55.46;ReadPosRankSum=2.873;VQSLOD=5.5276;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,35:40:90.31:2360,90,0	0/0:11,0:11:33.11:0,33,607	0/0:13,0:13:17.29:0,17,463	0/0:15,0:15:36.10:0,36,617	0/0:38,0:38:99:0,108,1928	0/0:24,0:24:72.24:0,72,1282	0/0:22,0:22:60.19:0,60,1059	0/0:29,0:29:72.23:0,72,1237	0/0:11,0:11:33.11:0,33,607	1/1:4,25:29:81.25:2006,81,0	1/1:1,27:30:84.29:2156,84,0	1/1:1,19:21:51.18:1332,51,0	1/1:2,21:26:60.21:1565,60,0	0/0:21,0:21:57.18:0,57,1018	0/0:33,0:33:93.31:0,93,1668	0/0:37,0:37:99:0,105,1872	0/0:16,0:16:45.15:0,45,828	1/1:5,23:28:57.20:1480,57,0	0/0:27,0:27:78.26:0,78,1379	0/0:25,0:25:69.20:0,69,1149	0/0:18,0:18:51.17:0,51,928	1/1:2,13:14:39.13:1028,39,0	1/1:2,11:15:36.12:939,36,0	1/1:2,18:22:45.63:1186,46,0	1/1:4,26:31:72.25:1884,72,0	0/1:29,0:29:36.67:37,0,1398	0/0:33,0:33:93.28:0,93,1623	0/0:15,0:15:45.15:0,45,813
chr10	73783204	.	CTTAT	C	1027.45	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=6.408;DP=414;FS=7.091;HRun=0;HaplotypeScore=67.9620;InbreedingCoeff=0.8026;MQ=69.41;MQ0=0;MQRankSum=-1.073;QD=27.77;ReadPosRankSum=2.822;VQSLOD=2.8187;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,9:14:21.07:350,21,0	0/0:6,0:6:12.04:0,12,294	0/0:10,0:9:18.03:0,18,363	0/0:10,0:10:12.93:0,13,298	0/0:29,0:29:57.18:0,57,1310	0/0:20,0:20:54.15:0,54,1209	0/0:7,0:7:12.04:0,12,295	0/0:45,0:44:87.30:0,87,2142	0/0:6,0:6:15.05:0,15,366	0/0:18,0:18:27.09:0,27,666	0/0:20,0:20:42.14:0,42,1036	0/0:5,0:8:9.03:0,9,158	0/0:2,0:10:24.08:0,24,422	0/0:15,0:15:30.09:0,30,676	0/0:14,0:14:30.09:0,30,688	0/0:12,0:12:27.09:0,27,664	0/0:16,0:16:45.15:0,45,1019	1/1:5,18:23:48.16:797,48,0	0/0:22,0:22:45.15:0,45,1062	0/0:22,0:22:48.16:0,48,1182	0/0:4,0:4:12.04:0,12,271	0/0:2,0:2:2.97:0,3,20	0/0:3,0:5:9.02:0,9,130	./.	0/0:18,0:18:33.11:0,33,811	0/0:23,0:23:63.22:0,63,1549	0/0:27,0:27:54.19:0,54,1297	0/0:6,0:6:15.05:0,15,346
chr10	73785043	.	AT	A	1064.15	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.628;DP=488;FS=0.000;HRun=9;HaplotypeScore=56.5066;InbreedingCoeff=0.8808;MQ=66.79;MQ0=0;MQRankSum=-1.936;QD=23.65;ReadPosRankSum=1.396;VQSLOD=4.3814;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.24:0,81,935	0/0:7,0:7:21.06:0,21,242	0/0:5,0:5:3.69:0,4,75	0/0:8,0:7:8.96:0,9,82	0/0:24,1:25:35.68:0,36,650	0/0:19,0:19:54.14:0,54,605	0/0:15,0:15:36.11:0,36,415	0/0:26,0:26:63.18:0,63,719	0/0:18,1:19:23.74:0,24,514	1/1:0,11:11:33.02:302,33,0	1/1:0,21:21:60.03:548,60,0	0/0:14,0:14:33.09:0,33,371	0/0:26,1:27:35.76:0,36,654	0/0:18,0:18:54.15:0,54,614	0/0:16,1:17:17.64:0,18,439	0/0:18,0:18:45.12:0,45,509	0/0:26,0:25:66.18:0,66,750	0/0:25,0:25:51.15:0,51,588	0/0:22,1:23:35.72:0,36,665	0/0:19,0:19:45.13:0,45,519	0/0:3,0:3:9.03:0,9,104	0/0:14,0:14:39.12:0,39,450	0/0:12,0:12:27.08:0,27,311	0/0:6,0:6:18.04:0,18,199	1/1:0,13:13:39.02:357,39,0	0/0:21,2:23:8.24:0,8,590	0/0:33,0:33:90.24:0,90,1016	0/0:11,0:11:33.04:0,33,339
chr10	73785078	.	C	CTTT	1820.11	PASS	AB=0.789;AC=18;AF=0.321;AN=56;BaseQRankSum=6.092;DP=520;FS=13.311;HRun=14;HaplotypeScore=95.0806;InbreedingCoeff=0.7945;MQ=65.47;MQ0=1;MQRankSum=-1.583;QD=10.28;ReadPosRankSum=-1.534;VQSLOD=-0.6819;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:6.02:0,6,419	0/0:9,0:9:20.01:0,20,190	0/0:17,0:12:19.47:0,19,157	0/1:9,0:4:5.97:6,0,11	0/0:25,0:27:16.62:0,17,363	0/0:18,0:19:33.37:0,33,352	0/0:13,0:13:23.69:0,24,239	0/0:24,0:24:26.22:0,26,276	0/0:13,0:13:21.31:0,21,216	1/1:9,1:13:19.19:170,19,0	1/1:19,1:27:46.05:421,46,0	1/1:8,0:18:7.22:48,7,0	1/1:4,1:22:22.18:191,22,0	0/0:15,0:15:29.90:0,30,308	0/0:15,0:15:35.85:0,36,370	0/0:22,0:25:43.15:0,43,445	0/0:18,0:20:16.40:0,16,299	1/1:6,2:32:26.55:263,27,0	0/0:17,0:18:7.21:0,7,170	0/0:19,0:19:20.28:0,20,208	0/0:4,0:4:8.90:0,9,85	1/1:1,2:16:34.19:302,34,0	0/1:3,0:11:13.09:95,0,13	1/1:1,0:7:11.95:90,12,0	1/1:12,0:22:54.46:434,54,0	0/0:25,0:25:47.66:0,48,487	0/0:37,0:39:73.04:0,73,752	0/0:13,0:12:17.74:0,18,185
chr10	73787087	.	G	GA	446.50	PASS	AB=0.910;AC=9;AF=0.161;AN=56;BaseQRankSum=-1.186;DP=388;FS=4.582;HRun=10;HaplotypeScore=86.4199;InbreedingCoeff=0.2825;MQ=75.99;MQ0=0;MQRankSum=1.199;QD=5.07;ReadPosRankSum=-1.655;VQSLOD=1.3541;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,16:23:38.89:386,39,0	0/0:6,0:6:17.97:0,18,146	0/0:16,0:12:14.95:0,15,122	0/0:16,0:15:1.69:0,2,72	0/1:6,1:9:9.94:10,0,113	0/1:9,1:10:8.02:8,0,147	0/0:16,0:18:43.02:0,43,332	0/0:18,0:18:44.93:0,45,368	0/0:5,0:7:13.06:0,13,86	0/0:13,0:13:26.94:0,27,221	0/0:12,0:12:29.95:0,30,246	0/0:16,1:17:12.93:0,13,309	0/0:13,1:14:0.97:0,1,214	0/0:13,0:14:37.98:0,38,299	0/0:15,1:16:3.93:0,4,239	0/0:15,0:15:41.95:0,42,345	0/1:11,3:14:31.38:31,0,189	1/1:2,5:8:14.87:142,15,0	0/1:13,0:13:1.23:1,0,189	0/1:10,1:11:5.02:5,0,170	0/0:22,0:22:33.23:0,33,312	0/0:17,1:18:9.84:0,10,278	0/0:12,0:12:26.96:0,27,222	0/0:17,0:17:50.94:0,51,419	0/0:20,1:21:15.93:0,16,337	0/0:12,0:12:20.95:0,21,172	0/0:14,0:14:35.94:0,36,293	0/0:2,0:2:5.99:0,6,49
chr10	73787147	.	A	AAC	357.96	PASS	AB=0.985;AC=24;AF=0.522;AN=46;BaseQRankSum=-0.871;DP=434;FS=1.908;HRun=0;HaplotypeScore=89.2443;InbreedingCoeff=0.2410;MQ=69.22;MQ0=17;MQRankSum=3.143;QD=1.66;ReadPosRankSum=0.457;VQSLOD=1.7555;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:0.98:0,1,3	0/0:7,0:7:1.80:0,2,5	./.	0/0:35,0:22:0.47:0,0,1	./.	1/1:14,0:13:2.99:23,3,0	0/1:20,0:19:0.71:1,0,5	./.	1/1:8,0:8:1.55:4,2,0	0/0:22,0:21:0.47:0,0,2	0/0:14,0:14:3.25:0,3,24	0/0:13,0:12:2.74:0,3,12	1/1:9,0:9:2.99:23,3,0	1/1:12,0:12:6.46:49,6,0	1/1:21,0:21:6:64,6,0	1/1:15,8:24:2.96:43,3,0	1/1:17,0:16:11.24:115,11,0	0/1:13,0:13:0:0,0,0	./.	0/0:7,0:7:2.63:0,3,14	1/1:24,0:22:1.36:10,1,0	./.	0/0:15,0:15:0.47:0,0,1	1/1:17,0:16:5.03:29,5,0	0/0:10,0:10:0.21:0,0,1	0/1:17,0:16:31.18:31,0,48	0/1:15,0:16:17.22:75,0,17	1/1:2,0:2:0.47:1,0,0
chr10	73787201	.	CACAT	C	1910.81	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=1.667;DP=493;FS=2.009;HRun=0;HaplotypeScore=87.1036;InbreedingCoeff=0.6626;MQ=57.70;MQ0=27;MQRankSum=3.952;QD=9.19;ReadPosRankSum=-0.251;VQSLOD=2.7136;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:24:22.32:173,22,0	0/0:5,0:5:11.80:0,12,116	0/0:21,0:15:44.81:0,45,401	0/0:14,0:9:9.96:0,10,131	0/0:15,0:15:23.96:0,24,214	0/1:20,0:19:54.06:139,0,54	0/0:18,0:17:11.47:0,11,218	0/0:36,0:32:82.40:0,82,687	0/0:8,0:8:17.93:0,18,141	1/1:17,0:16:38.56:336,39,0	0/1:11,0:11:6.29:105,0,6	1/1:2,12:14:3.01:57,3,0	1/1:13,0:13:26.90:213,27,0	0/0:18,0:18:12.10:0,12,271	0/0:22,0:21:40.25:0,40,456	0/0:21,0:21:20.54:0,21,227	0/0:23,0:23:10.14:0,10,443	1/1:14,0:13:22.01:228,22,0	0/0:16,0:13:22.90:0,23,210	0/0:12,0:11:16.70:0,17,172	0/0:26,0:22:2.76:0,3,480	1/1:9,0:8:14.98:123,15,0	1/1:2,16:17:0.04:1,0,0	1/1:22,0:20:38.88:310,39,0	1/1:20,0:20:50.89:417,51,0	0/0:25,0:24:43.90:0,44,594	0/1:24,0:24:5.26:5,0,439	0/0:5,0:1:3:0,3,25
chr10	73787203	.	CAT	C	2120.40	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=2.100;DP=494;FS=4.531;HRun=0;HaplotypeScore=72.3051;InbreedingCoeff=0.6475;MQ=61.25;MQ0=24;MQRankSum=0.057;QD=8.87;ReadPosRankSum=-0.571;VQSLOD=3.0005;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,1:25:32.95:287,33,0	0/0:5,0:5:11.79:0,12,88	0/0:23,0:17:47.81:0,48,428	0/0:15,0:10:12.94:0,13,153	0/0:10,3:13:23.94:0,24,191	1/1:20,0:19:11.74:178,12,0	0/0:19,0:18:14.36:0,14,229	0/0:34,0:33:90.06:0,90,732	0/1:8,0:8:3.99:4,0,104	1/1:18,0:17:44.53:382,45,0	0/1:10,0:10:6.32:105,0,6	1/1:14,0:14:3:26,3,0	1/1:12,0:12:26.90:213,27,0	0/0:18,0:18:12.01:0,12,221	0/0:22,0:21:42.97:0,43,405	0/0:18,0:18:20.79:0,21,179	0/1:25,0:25:7.14:7,0,352	1/1:14,0:13:25.58:237,26,0	0/0:18,0:15:29.38:0,29,272	0/0:12,0:11:16.69:0,17,172	0/0:27,0:23:3.22:0,3,378	1/1:10,0:9:17.97:147,18,0	1/1:18,0:17:0.17:0,0,0	1/1:19,0:17:38.88:310,39,0	1/1:20,0:20:50.89:417,51,0	0/0:26,0:25:22:0,22,477	0/1:24,0:24:5.42:5,0,344	0/0:5,0:1:3:0,3,25
chr10	73788261	.	A	AG	2009.69	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.530;DP=860;FS=7.030;HRun=4;HaplotypeScore=81.6432;InbreedingCoeff=0.9914;MQ=93.13;MQ0=1;MQRankSum=-5.741;QD=34.06;ReadPosRankSum=1.841;VQSLOD=4.1948;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:87.29:1187,87,0	0/0:9,0:9:27.04:0,27,292	0/0:37,0:37:98.16:0,98,1008	0/0:38,0:38:97.77:0,98,1063	0/0:30,0:30:87.25:0,87,987	0/0:27,0:27:78.22:0,78,885	0/0:28,0:28:84.22:0,84,940	0/0:37,0:37:90.24:0,90,1013	0/0:34,0:34:96.27:0,96,1087	0/0:31,0:31:81.17:0,81,895	0/0:30,0:30:84.22:0,84,942	0/0:30,0:30:90.26:0,90,1021	0/0:38,0:38:99:0,108,1223	0/0:38,0:38:99:0,105,1190	0/0:47,0:47:99:0,132,1497	0/0:33,0:33:93.23:0,93,1034	0/0:36,0:36:99:0,105,1190	1/1:0,25:25:69.23:944,69,0	0/0:24,0:23:66.15:0,66,734	0/0:28,0:28:78.22:0,78,885	0/0:56,0:55:99:0,162,1825	0/0:25,0:25:60.17:0,60,681	0/0:26,0:26:66.19:0,66,748	0/0:40,0:40:99:0,120,1361	0/0:20,0:20:57.16:0,57,647	0/0:22,0:22:54.14:0,54,603	0/0:32,0:32:93.25:0,93,1044	0/0:5,0:5:15.04:0,15,170
chr10	73789245	.	TTTTTTA	T	296.29	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=4.570;DP=497;FS=3.252;HRun=0;HaplotypeScore=97.4081;InbreedingCoeff=0.7765;MQ=78.01;MQ0=1;MQRankSum=-2.336;QD=6.17;ReadPosRankSum=1.117;VQSLOD=1.9388;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,13:26:18.06:372,18,0	0/0:10,0:10:21.07:0,21,685	1/1:21,0:17:5.60:32,6,0	0/0:18,0:11:6.96:0,7,142	0/0:24,0:24:51.17:0,51,1601	0/0:17,0:17:33.10:0,33,1003	0/0:16,0:16:30.09:0,30,850	0/0:34,0:34:48.16:0,48,1444	0/0:6,0:6:9.03:0,9,293	0/0:16,0:16:36.12:0,36,1143	0/0:21,0:21:51.17:0,51,1563	0/0:10,0:10:21.07:0,21,653	0/0:10,0:10:15.05:0,15,489	0/0:22,0:22:33.11:0,33,1074	0/0:20,0:20:39.11:0,39,1010	0/0:12,0:12:30.09:0,30,828	0/0:30,0:30:78.27:0,78,2446	0/0:23,0:23:60.21:0,60,1935	0/0:17,0:16:27.09:0,27,880	0/0:17,0:17:39.13:0,39,1270	0/0:12,0:12:18.06:0,18,565	0/0:8,0:8:3.01:0,3,90	0/0:13,0:13:27.08:0,27,807	./.	0/0:25,0:25:54.19:0,54,1734	0/0:26,0:26:39.59:0,40,1117	0/0:24,0:24:63.22:0,63,2038	0/0:17,0:17:36.12:0,36,1110
chr10	73791010	.	A	ATTT	1483.70	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.340;DP=616;FS=1.484;HRun=10;HaplotypeScore=97.3518;InbreedingCoeff=0.9254;MQ=77.84;MQ0=0;MQRankSum=-2.632;QD=29.09;ReadPosRankSum=-0.861;VQSLOD=2.7116;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:25:34.32:598,34,0	0/0:5,0:5:15.05:0,15,182	0/0:21,0:21:31.83:0,32,367	0/0:11,0:11:4.86:0,5,85	0/0:22,0:22:51.05:0,51,620	0/0:29,0:29:75.16:0,75,911	0/0:18,0:19:51.07:0,51,601	0/0:33,0:35:79.47:0,79,936	0/0:17,0:17:42.11:0,42,511	0/0:24,0:25:60.08:0,60,711	0/0:26,0:26:63.14:0,63,764	0/0:29,0:30:76.55:0,77,946	0/0:23,0:24:64.52:0,65,771	0/0:20,0:20:51.09:0,51,609	0/0:37,0:39:96.10:0,96,1149	0/0:33,0:33:87.25:0,87,1058	0/0:32,0:33:81.06:0,81,966	1/1:3,20:26:55.43:1007,55,0	0/0:16,0:17:34.41:0,34,434	0/0:19,0:19:43.51:0,44,545	0/0:21,0:21:42.03:0,42,507	0/0:14,0:15:34.41:0,34,434	0/0:12,0:12:30.08:0,30,365	0/0:17,0:19:31.39:0,31,398	0/0:20,0:22:43.35:0,43,544	0/0:15,0:16:40.46:0,40,508	0/0:25,0:26:78.17:0,78,930	0/0:9,0:9:18.03:0,18,219
chr10	73791551	.	C	CT	3770.97	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.794;DP=632;FS=3.727;HRun=3;HaplotypeScore=64.1524;InbreedingCoeff=0.9738;MQ=78.63;MQ0=0;MQRankSum=-1.600;QD=35.91;ReadPosRankSum=1.709;VQSLOD=4.4318;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.17:0,57,683	0/0:10,0:10:30.09:0,30,360	0/0:26,0:26:72.07:0,72,825	0/0:11,0:11:5.64:0,6,168	0/0:31,0:31:87.23:0,87,1011	0/0:30,0:30:87.12:0,87,1012	0/0:12,0:12:30.09:0,30,360	0/0:30,0:30:84.24:0,84,989	0/0:16,0:16:48.13:0,48,565	0/0:36,0:36:99:0,102,1188	0/0:14,0:14:36.11:0,36,432	1/1:0,17:17:45.15:630,45,0	1/1:1,25:26:69.23:966,69,0	0/0:25,0:25:75.22:0,75,888	0/0:19,0:19:54.16:0,54,638	0/0:32,0:32:96.29:0,96,1151	0/0:28,0:28:81.25:0,81,972	0/0:16,0:16:36.11:0,36,431	0/0:20,0:20:51.15:0,51,602	0/0:32,0:32:96.29:0,96,1152	0/0:9,0:9:27.08:0,27,324	1/1:0,22:22:60.11:787,60,0	1/1:1,23:24:57.66:799,58,0	1/1:1,15:16:42.14:588,42,0	0/0:24,0:24:63.18:0,63,745	0/0:29,0:29:75.22:0,75,891	0/0:41,0:41:99:0,123,1464	0/0:16,0:16:45.12:0,45,517
chr10	73791680	.	TCCTC	T	3959	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.370;DP=576;FS=5.924;HRun=0;HaplotypeScore=92.7342;InbreedingCoeff=0.9921;MQ=64.21;MQ0=0;MQRankSum=-1.841;QD=36.66;ReadPosRankSum=2.057;VQSLOD=3.2256;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:25:54.17:910,54,0	0/0:7,0:7:15.05:0,15,355	0/0:17,0:13:20.84:0,21,491	0/0:26,0:21:43.11:0,43,814	0/0:23,0:23:51.18:0,51,1265	0/0:25,0:25:66.21:0,66,1584	0/0:23,0:23:60.18:0,60,1371	0/0:23,0:23:45.14:0,45,971	0/0:14,0:14:39.13:0,39,958	1/1:6,20:26:60.17:964,60,0	1/1:4,26:30:69.24:1199,69,0	0/0:22,0:22:57.18:0,57,1336	0/0:21,0:21:57.20:0,57,1427	0/0:19,0:19:54.18:0,54,1299	0/0:24,0:24:63.22:0,63,1597	0/0:25,0:25:63.22:0,63,1570	0/0:24,0:24:61.45:0,61,1515	0/0:15,0:15:36.12:0,36,884	0/0:10,0:10:21.07:0,21,516	0/0:23,0:23:57.18:0,57,1390	0/0:19,0:19:45.15:0,45,1102	0/0:9,0:9:21.07:0,21,519	0/0:15,0:15:42.14:0,42,1050	0/0:18,0:18:48.16:0,48,1219	1/1:3,24:27:51.17:885,51,0	0/0:18,0:18:45.15:0,45,1118	0/0:26,0:26:75.26:0,75,1832	0/0:21,0:21:57.20:0,57,1419
chr10	73791948	.	A	AT	5368.36	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-0.328;DP=545;FS=9.103;HRun=5;HaplotypeScore=54.8953;InbreedingCoeff=0.9570;MQ=72.31;MQ0=0;MQRankSum=-1.781;QD=31.58;ReadPosRankSum=1.711;VQSLOD=5.2304;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,22:28:60.19:777,60,0	0/0:9,0:9:27.07:0,27,290	0/0:7,0:7:15.02:0,15,151	0/0:8,0:8:1.76:0,2,113	0/0:26,0:26:66.15:0,66,701	0/0:20,0:20:57.12:0,57,599	0/0:9,0:9:27.07:0,27,290	0/0:44,0:44:99:0,117,1241	0/0:18,0:18:51.11:0,51,539	1/1:3,22:25:66.21:864,66,0	1/1:3,18:21:48.16:632,48,0	1/1:1,15:16:42.14:553,42,0	1/1:1,19:20:48.16:632,48,0	0/0:16,0:16:45.08:0,45,467	0/0:27,0:27:60.12:0,60,636	0/0:17,0:17:45.11:0,45,484	0/0:28,0:28:84.19:0,84,894	0/0:21,0:21:57.14:0,57,613	0/0:34,0:34:84.15:0,84,880	0/0:20,0:20:57.14:0,57,612	0/0:9,0:9:21.04:0,21,218	1/1:0,7:7:17.97:214,18,0	1/1:0,15:15:36.12:474,36,0	1/1:1,7:8:18.06:237,18,0	1/1:2,28:30:75.24:987,75,0	0/0:26,0:26:69.16:0,69,735	0/0:32,0:31:93.23:0,93,1000	0/0:4,0:4:12.03:0,12,129
chr10	73794364	.	C	CTTGTTTGT	10560.29	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=7.110;DP=591;FS=6.294;HRun=0;HaplotypeScore=139.3692;InbreedingCoeff=0.8223;MQ=79.54;MQ0=0;MQRankSum=-14.868;QD=47.78;ReadPosRankSum=2.267;VQSLOD=4.3096;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:27:20.18:1006,20,0	0/0:9,0:9:27.09:0,27,724	0/0:27,0:27:56.97:0,57,1122	0/0:26,0:26:50.91:0,51,952	0/0:31,0:31:90.21:0,90,2218	0/0:16,0:16:39.14:0,39,1142	0/0:21,0:21:60.18:0,60,1433	0/0:24,0:24:57.17:0,57,1370	0/0:24,0:24:51.13:0,51,1212	1/1:29,0:27:68.60:1765,69,0	1/1:14,0:13:26.93:773,27,0	1/1:29,0:29:54.19:1922,54,0	1/1:17,0:17:36.12:1282,36,0	0/0:27,0:27:63.20:0,63,1547	0/0:15,0:15:36.11:0,36,904	0/0:11,0:11:33.10:0,33,823	0/0:22,0:22:63.18:0,63,1529	0/0:18,0:18:33.47:0,33,1109	0/0:24,0:24:51.12:0,51,990	0/0:18,0:18:48.11:0,48,1120	0/0:24,0:24:42.14:0,42,1127	1/1:15,0:13:24.08:853,24,0	1/1:12,0:11:18.06:643,18,0	0/1:17,0:17:13.84:1019,0,14	1/1:22,0:19:50.79:1276,51,0	0/1:39,0:38:19.47:19,0,2392	0/0:31,0:31:81.21:0,81,1808	0/0:2,0:2:6.02:0,6,161
chr10	73794371	.	G	GTTTGTTTGT	11830.03	PASS	AB=0.854;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.294;DP=579;FS=9.663;HRun=0;HaplotypeScore=145.7542;InbreedingCoeff=0.6142;MQ=79.49;MQ0=0;MQRankSum=-14.709;QD=63.60;ReadPosRankSum=3.701;VQSLOD=4.4756;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:1.05:784,1,0	0/0:9,0:9:27.09:0,27,826	0/0:26,0:26:65.99:0,66,1401	0/0:25,0:26:45.57:0,46,1254	0/0:32,0:32:93.30:0,93,2578	0/0:16,0:16:48.12:0,48,1359	0/0:23,0:23:69.22:0,69,1806	0/0:23,0:23:57.23:0,57,1604	0/0:19,0:19:57.18:0,57,1466	1/1:29,0:27:1.49:1590,1,0	0/1:14,0:13:32.89:644,0,33	1/1:1,20:30:54.18:2460,54,0	1/1:1,16:19:36.12:1717,36,0	0/0:24,0:24:63.22:0,63,1769	0/0:14,0:14:36.12:0,36,1063	0/0:13,0:13:39.11:0,39,1002	0/0:25,0:25:66.21:0,66,1837	0/0:17,0:17:51.08:0,51,1363	0/0:21,0:21:60.15:0,60,1280	0/0:18,0:18:48.12:0,48,1332	0/0:18,0:18:42.14:0,42,1286	1/1:0,13:16:27.09:1178,27,0	1/1:1,10:14:18.06:824,18,0	0/1:4,11:18:39.71:1415,0,40	0/1:24,0:21:25.05:1218,0,25	0/0:39,0:38:12.50:0,13,2814	0/0:28,0:28:81.24:0,81,2111	0/0:2,0:2:6.02:0,6,184
chr10	73794374	.	T	TG	1005.79	PASS	AB=0.895;AC=12;AF=0.214;AN=56;BaseQRankSum=14.537;DP=567;FS=8.958;HRun=0;HaplotypeScore=98.9509;InbreedingCoeff=0.2911;MQ=81.84;MQ0=0;MQRankSum=-13.923;QD=5.88;ReadPosRankSum=3.206;VQSLOD=2.9847;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:17.50:61,0,18	0/0:9,0:9:27.09:0,27,371	0/0:26,0:26:75.01:0,75,934	0/0:29,0:29:61.91:0,62,901	0/0:32,0:32:96.30:0,96,1299	0/0:18,0:18:51.16:0,51,695	0/0:25,0:25:69.23:0,69,964	0/0:24,0:24:67.44:0,67,888	0/0:20,0:20:60.18:0,60,806	1/1:16,13:27:1.69:341,2,0	0/1:7,7:13:16.89:124,0,17	1/1:23,0:23:13.24:144,13,0	1/1:17,0:17:8.52:100,9,0	0/0:23,0:23:69.21:0,69,932	0/0:13,0:13:39.12:0,39,531	0/0:13,0:13:39.12:0,39,530	0/0:25,0:25:75.19:0,75,993	0/0:17,0:17:51.17:0,51,712	0/0:21,0:21:63.15:0,63,786	0/0:17,0:17:48.12:0,48,649	0/0:16,0:16:42.14:0,42,587	0/1:16,0:14:17.74:70,0,18	0/1:12,0:11:8.83:40,0,9	0/1:16,0:16:48.57:68,0,49	0/1:14,10:21:27.81:213,0,28	0/0:36,1:36:84.48:0,84,1393	0/0:29,0:29:87.23:0,87,1119	0/0:2,0:2:6.02:0,6,84
chr10	73794375	.	T	TTTGTTTG	5937.55	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=14.095;DP=562;FS=7.841;HRun=0;HaplotypeScore=146.5983;InbreedingCoeff=0.6100;MQ=81.85;MQ0=0;MQRankSum=-15.262;QD=34.93;ReadPosRankSum=2.171;VQSLOD=4.1764;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:43.21:444,0,43	0/0:9,0:9:27.09:0,27,699	0/0:25,0:25:68.87:0,69,1403	0/0:29,0:29:80.63:0,81,1300	0/0:32,0:32:93.31:0,93,2283	0/0:18,0:18:54.17:0,54,1255	0/0:25,0:25:75.22:0,75,1728	0/0:23,0:23:64.41:0,64,1452	0/0:20,0:20:57.18:0,57,1331	1/1:15,13:26:58.27:1655,58,0	1/1:7,6:13:22.41:623,22,0	1/1:23,0:23:19.50:664,19,0	1/1:17,0:17:12.13:452,12,0	0/0:23,0:23:69.22:0,69,1599	0/0:13,0:13:39.13:0,39,958	0/0:13,0:13:36.11:0,36,830	0/0:25,0:25:75.19:0,75,1748	0/0:18,0:18:38.22:0,38,1180	0/0:18,0:18:48.15:0,48,1096	0/0:17,0:17:48.15:0,48,1189	0/0:16,0:16:44.87:0,45,1111	0/1:16,0:14:49.31:288,0,49	0/1:12,0:11:5.93:227,0,6	0/1:16,0:16:65.13:362,0,65	1/1:14,10:21:55.82:1222,56,0	0/0:36,1:36:9.31:0,9,2410	0/0:29,0:29:78.24:0,78,1859	0/0:2,0:2:6.02:0,6,155
chr10	73795728	.	GT	G	6532.47	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.911;DP=716;FS=2.244;HRun=2;HaplotypeScore=73.3102;InbreedingCoeff=0.9997;MQ=76.22;MQ0=0;MQRankSum=-3.456;QD=35.89;ReadPosRankSum=4.028;VQSLOD=5.5112;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,43:44:99:1558,120,0	0/0:12,0:12:36.12:0,36,540	0/0:17,0:17:48.10:0,48,643	0/0:11,0:11:31.86:0,32,398	0/0:26,0:26:75.25:0,75,1106	0/0:29,0:29:87.27:0,87,1263	0/0:24,0:24:66.22:0,66,987	0/0:29,0:29:81.27:0,81,1195	0/0:29,0:29:87.28:0,87,1284	0/0:33,0:33:96.32:0,96,1435	0/0:34,0:34:99:0,102,1527	1/1:0,20:20:60.20:779,60,0	1/1:1,28:29:39.30:1006,39,0	0/0:32,0:32:93.29:0,93,1352	0/0:26,0:26:78.26:0,78,1151	0/0:24,0:24:72.24:0,72,1078	0/0:30,0:30:87.24:0,87,1257	0/0:15,0:15:45.13:0,45,651	0/0:18,0:18:54.18:0,54,810	0/0:32,0:32:96.33:0,96,1438	0/0:25,0:25:75.23:0,75,1085	1/1:0,25:25:69.22:894,69,0	1/1:1,35:36:99:1284,99,0	1/1:0,28:28:78.25:1012,78,0	0/0:28,0:28:84.27:0,84,1223	0/0:25,0:25:72.24:0,72,1062	0/0:26,0:25:78.26:0,78,1169	0/0:9,0:9:27.09:0,27,405
chr10	73798358	.	AC	A	1497.14	PASS	AB=1.000;AC=21;AF=0.389;AN=54;BaseQRankSum=6.497;DP=457;FS=1.455;HRun=3;HaplotypeScore=64.1039;InbreedingCoeff=0.8189;MQ=42.40;MQ0=22;MQRankSum=-1.766;QD=9.18;ReadPosRankSum=-0.165;VQSLOD=0.8680;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:18:43.44:276,43,0	0/0:7,0:7:17.93:0,18,157	1/1:7,0:2:0.46:1,0,0	./.	0/0:23,0:20:36.80:0,37,279	0/0:17,0:16:7.60:0,8,183	0/0:15,0:13:29.49:0,29,204	0/0:22,0:20:39.38:0,39,295	0/1:6,0:6:12.22:12,0,38	1/1:5,12:18:18:162,18,0	1/1:11,0:11:24.03:125,24,0	1/1:13,0:15:34.38:252,34,0	1/1:18,0:17:41.18:254,41,0	0/0:11,0:12:22.03:0,22,183	0/0:15,0:15:26.71:0,27,265	0/0:11,0:10:20.72:0,21,166	0/0:38,0:36:4.92:0,5,243	0/0:29,0:26:14.84:0,15,265	0/0:18,0:17:26.28:0,26,234	0/0:18,0:17:46.07:0,46,350	0/0:11,0:11:5.30:0,5,132	1/1:19,0:17:20.77:155,21,0	1/1:20,0:19:23.39:161,23,0	1/1:14,0:9:17.68:111,18,0	1/1:15,0:14:29.69:190,30,0	0/0:24,0:21:3.61:0,4,313	0/0:18,0:17:34.56:0,35,263	0/0:11,0:7:20.75:0,21,153
chr10	73798360	.	CCAAAAAA	C	1904.45	PASS	AB=0.979;AC=17;AF=0.315;AN=54;BaseQRankSum=4.212;DP=470;FS=29.452;HRun=0;HaplotypeScore=103.0027;InbreedingCoeff=0.7188;MQ=42.34;MQ0=22;MQRankSum=-3.116;QD=11.90;ReadPosRankSum=2.618;VQSLOD=0.7901;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:17:43.05:390,43,0	0/0:8,0:8:24.07:0,24,588	1/1:10,0:2:0.58:1,1,0	./.	0/0:24,0:21:53.98:0,54,1013	0/0:18,0:17:33.09:0,33,840	0/0:15,0:13:33.06:0,33,784	0/0:21,0:20:53.72:0,54,874	0/0:6,0:6:18.05:0,18,356	0/1:20,0:20:61.79:62,0,639	0/1:11,0:11:5.13:5,0,368	1/1:11,2:14:36.46:386,36,0	1/1:17,0:17:44.19:292,44,0	0/0:12,0:13:36.07:0,36,680	0/0:16,0:16:45.06:0,45,867	0/0:11,0:10:21.96:0,22,649	0/0:39,0:38:33.07:0,33,982	0/0:28,0:24:53.99:0,54,1010	0/0:20,0:19:52.38:0,52,1280	0/0:18,0:17:47.92:0,48,959	0/0:12,0:12:30.90:0,31,393	1/1:1,12:17:23.86:416,24,0	1/1:1,16:19:23.90:405,24,0	1/1:13,1:9:17.68:111,18,0	0/1:14,0:14:25.17:25,0,639	0/0:25,0:22:66.09:0,66,1169	0/0:17,0:18:54.06:0,54,1075	0/0:11,0:7:20.97:0,21,356
chr10	73799704	.	CT	C	168.49	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=2.719;DP=491;FS=0.000;HRun=14;HaplotypeScore=63.0058;InbreedingCoeff=0.6729;MQ=65.55;MQ0=5;MQRankSum=2.103;QD=7.02;ReadPosRankSum=1.233;VQSLOD=2.4378;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:0:0,0,0	0/0:5,0:5:15.02:0,15,139	0/0:20,0:10:2.30:0,2,30	0/0:17,0:12:18.91:0,19,131	0/0:21,2:27:24.25:0,24,448	0/0:15,1:16:15.28:0,15,265	0/0:15,0:15:27.02:0,27,246	0/0:22,0:22:39.04:0,39,362	0/0:9,0:9:20.85:0,21,173	0/0:26,1:27:42.29:0,42,515	0/0:17,0:17:39.04:0,39,362	0/0:12,0:12:0:0,0,0	0/0:11,0:11:0:0,0,0	0/0:22,0:22:44.77:0,45,376	0/0:12,1:13:13.43:0,13,255	0/0:22,0:22:36.42:0,36,335	0/0:26,0:26:63.07:0,63,582	1/1:6,18:23:34.99:261,35,0	0/0:15,0:15:30.03:0,30,279	0/0:26,1:28:50.95:0,51,455	0/0:12,0:12:17.10:0,17,157	./.	0/0:8,0:7:0:0,0,0	./.	0/0:21,0:21:44.96:0,45,401	0/0:25,0:27:65.85:0,66,584	0/0:26,0:25:63.95:0,64,604	0/0:15,0:16:41.76:0,42,363
chr10	73799994	.	GTCTA	G	78.27	PASS	AB=1.000;AC=11;AF=0.212;AN=52;BaseQRankSum=1.045;DP=606;FS=2.609;HRun=0;HaplotypeScore=122.6275;InbreedingCoeff=0.3630;MQ=54.27;MQ0=10;MQRankSum=-1.362;QD=0.47;ReadPosRankSum=-1.194;VQSLOD=2.3708;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:2.99:0,3,23	0/0:5,0:5:2.99:0,3,23	./.	./.	0/0:26,0:26:39.07:0,39,597	1/1:18,13:31:3.01:47,3,0	1/1:21,0:20:9:94,9,0	0/0:44,0:39:11.90:0,12,85	0/0:24,0:23:26.83:0,27,450	0/0:26,0:24:15.81:0,16,168	0/1:12,0:12:0:0,0,0	1/1:22,0:22:2.04:6,2,0	0/1:18,0:18:12:12,0,17	0/0:26,0:26:51.09:0,51,819	0/0:28,0:28:51.06:0,51,673	0/0:29,0:29:48.01:0,48,587	0/0:18,0:17:33.06:0,33,492	0/1:21,0:20:29.66:30,0,311	0/0:25,0:22:20.91:0,21,270	0/0:19,0:18:27.04:0,27,380	0/0:25,0:25:30.45:0,30,351	0/1:18,0:18:0:0,0,0	0/1:23,0:23:13.88:14,0,34	0/0:16,0:16:2.94:0,3,39	0/0:17,0:17:9.03:0,9,110	0/0:28,0:28:48.90:0,49,486	0/0:20,0:20:26.99:0,27,316	0/0:20,0:20:21.02:0,21,298
chr10	73800020	.	CTATCTATCTATCTATCTA	C	1119.56	PASS	AB=1.000;AC=14;AF=0.259;AN=54;BaseQRankSum=5.634;DP=565;FS=3.031;HRun=0;HaplotypeScore=231.5361;InbreedingCoeff=0.6419;MQ=51.74;MQ0=15;MQRankSum=-3.642;QD=6.70;ReadPosRankSum=-2.050;VQSLOD=2.4643;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:16:6.02:134,6,0	0/0:5,0:5:9.03:0,9,235	0/0:2,0:1:3.01:0,3,40	0/0:2,0:2:6.01:0,6,74	0/0:29,0:29:60.21:0,60,2470	0/0:20,0:20:12.04:0,12,394	0/0:21,0:20:24.55:0,25,635	0/0:45,0:38:66.18:0,66,1277	0/0:19,0:19:30.10:0,30,1445	1/1:25,0:22:30.07:632,30,0	0/0:8,0:8:0.47:0,0,1	1/1:8,12:20:3.01:126,3,0	1/1:6,14:19:6.02:261,6,0	0/0:21,0:21:51.14:0,51,2667	0/0:28,0:28:60.19:0,60,2950	0/0:35,0:35:87.30:0,87,4358	0/0:17,0:16:36.12:0,36,1450	0/0:23,0:22:51.12:0,51,2011	0/0:20,0:17:25.01:0,25,1043	0/0:21,0:20:36.11:0,36,1710	0/1:22,0:22:17.83:18,0,1545	1/1:14,0:13:3.01:43,3,0	1/1:26,0:26:3.01:58,3,0	0/1:17,0:17:0:0,0,0	./.	0/0:27,0:27:48.87:0,49,2644	0/0:21,0:21:45.09:0,45,1837	0/0:16,0:16:30.10:0,30,1595
chr10	73800024	.	CTATCTATCTATCTA	C	1043.48	PASS	AB=0.786;AC=16;AF=0.296;AN=54;BaseQRankSum=5.688;DP=558;FS=8.898;HRun=0;HaplotypeScore=192.4796;InbreedingCoeff=0.6503;MQ=51.69;MQ0=16;MQRankSum=-3.003;QD=6.07;ReadPosRankSum=-2.171;VQSLOD=1.5498;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:16:6.02:110,6,0	0/0:7,0:7:18.06:0,18,347	0/0:3,0:1:3.01:0,3,40	0/0:4,0:3:6.01:0,6,74	0/0:27,0:27:60.20:0,60,1920	0/0:20,0:20:15.05:0,15,332	0/0:18,0:17:27.56:0,28,556	0/0:45,0:38:84.24:0,84,1321	0/0:17,0:17:30.10:0,30,1084	1/1:28,0:22:35.23:627,35,0	1/1:8,0:8:2.76:43,3,0	1/1:17,0:17:3.01:80,3,0	1/1:20,0:19:6.02:170,6,0	0/0:21,0:21:51.14:0,51,2121	0/0:28,0:28:66.21:0,66,2374	0/0:36,0:36:90.31:0,90,3505	0/0:16,0:15:36.12:0,36,1075	0/0:22,0:22:51.12:0,51,1563	0/0:19,0:16:8.83:0,9,855	0/0:22,0:21:41.17:0,41,1443	0/1:21,0:21:19.62:20,0,1222	1/1:12,0:11:3.01:43,3,0	1/1:7,20:27:3.01:110,3,0	0/1:4,12:15:0:0,0,0	./.	0/0:25,0:25:20.91:0,21,2069	0/0:21,0:21:46.97:0,47,1495	0/0:17,0:17:36.12:0,36,1381
chr10	73800036	.	CTA	C	900.72	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=8.622;DP=559;FS=6.116;HRun=0;HaplotypeScore=94.6685;InbreedingCoeff=0.6760;MQ=53.02;MQ0=22;MQRankSum=-2.839;QD=4.33;ReadPosRankSum=-2.004;VQSLOD=1.4369;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,18:17:9.03:129,9,0	0/0:8,0:8:21.06:0,21,308	0/0:8,0:4:11.86:0,12,120	0/0:5,0:3:6.01:0,6,73	0/0:31,0:31:81.28:0,81,1291	0/0:19,0:19:17.76:0,18,273	0/0:22,1:22:45.52:0,46,594	0/0:43,0:36:99:0,105,1535	0/0:15,0:15:36.11:0,36,537	1/1:6,17:19:37.57:554,38,0	1/1:1,7:7:9.03:127,9,0	1/1:14,1:14:2.92:17,3,0	1/1:15,1:15:5.98:48,6,0	0/0:20,0:20:57.16:0,57,913	0/0:31,0:31:87.28:0,87,1409	0/0:32,0:32:93.32:0,93,1559	0/0:21,0:20:54.16:0,54,812	0/0:22,0:22:35.26:0,35,781	0/0:17,0:14:12.29:0,12,482	0/0:23,0:22:38.88:0,39,645	0/1:19,0:19:28.27:28,0,567	1/1:3,15:16:5.79:86,6,0	1/1:23,2:23:3.01:42,3,0	0/1:15,0:14:0:0,0,0	1/1:9,11:17:3.01:42,3,0	0/1:25,0:25:0.98:1,0,854	0/0:20,0:20:47.39:0,47,810	0/0:13,0:13:26.74:0,27,513
chr10	73800123	.	C	CCA	3394.20	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.913;DP=666;FS=1.023;HRun=0;HaplotypeScore=84.0033;InbreedingCoeff=0.9857;MQ=75.15;MQ0=7;MQRankSum=1.869;QD=46.50;ReadPosRankSum=1.870;VQSLOD=4.9287;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.21:0,87,1181	0/0:8,0:8:18.06:0,18,258	0/0:15,0:15:38.68:0,39,407	0/0:13,0:13:27.08:0,27,349	0/0:24,0:24:60.20:0,60,859	0/0:31,0:31:90.30:0,90,1289	0/0:24,0:24:66.22:0,66,944	0/0:38,0:38:99:0,105,1469	0/0:29,0:29:87.29:0,87,1245	1/1:3,24:26:72.25:1320,72,0	1/1:2,18:20:57.20:1029,57,0	0/0:30,0:29:72.24:0,72,1032	0/0:24,0:24:66.22:0,66,946	0/0:21,0:21:60.20:0,60,859	0/0:32,0:32:93.28:0,93,1281	0/0:20,0:20:60.18:0,60,840	0/0:35,0:35:99:0,99,1398	0/0:25,0:25:69.23:0,69,989	0/0:22,0:22:63.21:0,63,902	0/0:27,0:27:78.24:0,78,1081	0/0:26,0:26:78.25:0,78,1099	0/0:33,0:32:78.25:0,78,1091	0/0:20,0:18:42.14:0,42,595	0/0:12,0:12:33.11:0,33,472	1/1:3,21:20:57.20:1045,57,0	0/0:28,1:29:32.27:0,32,1147	0/0:18,0:18:51.17:0,51,730	0/0:4,0:4:12.04:0,12,166
chr10	73800501	.	TG	T	4854	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.104;DP=606;FS=28.313;HRun=1;HaplotypeScore=75.3886;InbreedingCoeff=0.9980;MQ=71.53;MQ0=0;MQRankSum=-6.667;QD=39.46;ReadPosRankSum=2.162;VQSLOD=2.8387;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:60.20:838,60,0	0/0:15,0:15:42.05:0,42,614	0/0:11,0:11:30.10:0,30,479	0/0:16,0:16:17.44:0,17,558	0/0:19,0:19:54.18:0,54,860	0/0:18,0:18:51.17:0,51,810	0/0:15,0:15:45.14:0,45,696	0/0:32,0:32:96.31:0,96,1486	0/0:23,0:23:69.22:0,69,1079	0/0:19,0:18:57.19:0,57,891	0/0:26,0:26:75.26:0,75,1196	1/1:0,24:24:72.24:1004,72,0	1/1:0,15:15:45.15:627,45,0	0/0:23,0:23:60.20:0,60,957	0/0:24,0:24:72.23:0,72,1126	0/0:22,0:22:66.21:0,66,1030	0/0:38,0:38:99:0,114,1815	0/0:21,0:21:42.14:0,42,671	0/0:22,0:22:66.23:0,66,1052	0/0:24,0:24:72.23:0,72,1126	0/0:12,0:12:36.11:0,36,549	1/1:0,18:18:54.18:752,54,0	1/1:0,25:25:66.22:920,66,0	1/1:0,18:18:51.17:712,51,0	0/0:23,0:23:63.21:0,63,1001	0/0:31,0:31:93.32:0,93,1478	0/0:26,0:26:78.27:0,78,1245	0/0:23,0:23:69.24:0,69,1102
chr10	73800538	.	C	CTCCTT	903.97	PASS	AB=0.525;AC=1;AF=0.018;AN=56;BaseQRankSum=-5.686;DP=667;FS=1.198;HRun=0;HaplotypeScore=154.7265;InbreedingCoeff=-0.0134;MQ=81.82;MQ0=0;MQRankSum=0.739;QD=43.05;ReadPosRankSum=2.382;VQSLOD=4.0320;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,99,1949	0/0:8,0:8:21.07:0,21,432	0/0:27,0:27:72.25:0,72,1448	0/0:24,0:24:57.14:0,57,1018	0/0:21,0:21:51.17:0,51,1017	0/0:26,0:26:69.22:0,69,1380	0/0:15,0:15:42.13:0,42,815	0/0:33,0:33:90.29:0,90,1727	0/0:22,0:22:63.22:0,63,1279	0/0:21,0:21:54.18:0,54,1078	0/0:15,0:15:33.11:0,33,657	0/0:25,0:25:66.21:0,66,1310	0/0:20,0:20:57.20:0,57,1180	0/0:20,0:20:57.19:0,57,1141	0/0:24,0:24:60.21:0,60,1226	0/0:29,0:29:78.27:0,78,1586	0/0:42,0:42:99:0,123,2477	0/1:2,15:21:26.07:978,0,26	0/0:28,0:28:75.26:0,75,1544	0/0:20,0:20:48.16:0,48,989	0/0:25,0:25:66.23:0,66,1336	0/0:28,0:28:69.24:0,69,1398	0/0:18,0:18:48.16:0,48,951	0/0:24,0:24:51.18:0,51,1057	0/0:22,0:22:63.22:0,63,1276	0/0:26,0:26:63.22:0,63,1306	0/0:20,0:20:57.17:0,57,1142	0/0:24,0:24:72.25:0,72,1467
chr10	73801314	.	CAG	C	4881.69	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.524;DP=709;FS=8.562;HRun=0;HaplotypeScore=84.3510;InbreedingCoeff=0.9918;MQ=82.71;MQ0=0;MQRankSum=-1.159;QD=39.69;ReadPosRankSum=3.616;VQSLOD=6.8231;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1924	0/0:11,0:11:30.10:0,30,560	0/0:19,0:19:24.36:0,24,744	0/0:24,0:24:54.26:0,54,998	0/0:38,0:38:99:0,111,2016	0/0:24,0:24:66.23:0,66,1226	0/0:19,0:19:57.18:0,57,1018	0/0:39,0:39:99:0,102,1739	0/0:20,0:20:57.15:0,57,971	0/0:19,0:19:57.20:0,57,1067	0/0:23,0:23:69.24:0,69,1272	1/1:0,22:22:57.19:838,57,0	1/1:0,32:32:90.30:1323,90,0	0/0:27,0:27:81.28:0,81,1492	0/0:26,0:26:75.23:0,75,1312	0/0:30,0:30:90.27:0,90,1577	0/0:33,0:33:93.32:0,93,1685	0/0:26,0:26:75.26:0,75,1392	0/0:30,0:30:87.27:0,87,1532	0/0:32,0:32:93.29:0,93,1656	0/0:9,0:9:23.86:0,24,373	1/1:0,26:26:75.25:1090,75,0	1/1:0,29:29:75.25:1101,75,0	1/1:0,14:14:36.12:529,36,0	0/0:36,0:36:99:0,105,1888	0/0:25,0:25:72.24:0,72,1316	0/0:36,0:36:99:0,108,2007	0/0:5,0:5:12.04:0,12,224
chr10	73802246	.	G	GA	3957.56	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-0.385;DP=721;FS=0.787;HRun=7;HaplotypeScore=80.2134;InbreedingCoeff=0.9630;MQ=81.20;MQ0=0;MQRankSum=-1.012;QD=29.32;ReadPosRankSum=1.831;VQSLOD=4.1241;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.07:0,48,464	0/0:13,0:13:36.06:0,36,347	0/0:20,0:20:42:0,42,385	0/0:15,0:16:9.07:0,9,248	0/0:45,0:45:99:0,123,1188	0/0:22,0:22:51.07:0,51,493	0/0:19,0:19:48.07:0,48,463	0/0:34,0:34:99:0,99,946	0/0:29,0:29:81.11:0,81,776	0/0:32,0:32:93.14:0,93,898	0/0:15,0:15:42.07:0,42,405	1/1:4,24:28:66.20:797,66,0	1/1:3,29:32:55.28:950,55,0	0/0:29,0:29:75.12:0,75,724	0/0:35,0:35:93.13:0,93,892	0/0:36,0:36:99:0,99,956	0/0:27,0:27:72.11:0,72,695	0/0:16,0:16:45.07:0,45,435	0/0:13,0:13:33.05:0,33,319	0/0:31,0:31:90.12:0,90,862	0/0:21,0:21:57.08:0,57,550	1/1:2,21:23:60.18:725,60,0	1/1:2,30:32:84.24:1015,84,0	1/1:5,15:20:39.12:471,39,0	0/0:44,0:44:99:0,123,1175	0/0:24,0:24:66.10:0,66,637	0/0:45,0:45:99:0,123,1188	0/0:2,0:2:6.01:0,6,58
chr10	73805101	.	G	GGTT	1361.40	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.595;DP=757;FS=5.166;HRun=0;HaplotypeScore=120.8942;InbreedingCoeff=0.9811;MQ=69.10;MQ0=4;MQRankSum=-4.208;QD=40.04;ReadPosRankSum=2.435;VQSLOD=5.0284;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:34:71.81:1456,72,0	0/0:19,0:19:54.17:0,54,787	0/0:43,0:34:74:0,74,979	0/0:33,0:27:60.18:0,60,830	0/0:32,0:32:87.29:0,87,1293	0/0:21,0:21:51.16:0,51,739	0/0:25,0:25:54.18:0,54,804	0/0:30,0:30:60.15:0,60,841	0/0:22,0:22:60.19:0,60,875	0/0:52,0:52:99:0,132,1910	0/0:21,0:21:48.15:0,48,699	0/0:32,0:32:78.26:0,78,1158	0/0:23,0:23:66.20:0,66,943	0/0:23,0:23:60.19:0,60,868	0/0:29,0:29:75.21:0,75,1073	0/0:30,0:30:84.28:0,84,1253	0/0:25,0:25:59.08:0,59,833	0/0:24,0:24:21.69:0,22,781	0/0:24,0:24:48.16:0,48,708	0/0:34,0:34:87.28:0,87,1280	0/0:20,0:20:51.15:0,51,721	0/0:26,0:26:69.23:0,69,1029	0/0:17,0:17:51.17:0,51,758	0/0:24,0:24:63.17:0,63,899	0/0:26,0:26:62.90:0,63,901	0/0:27,0:27:78.25:0,78,1130	0/0:33,0:33:90.29:0,90,1324	0/0:8,0:8:15.05:0,15,224
chr10	73806009	.	GC	G	2002.34	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.975;DP=599;FS=8.522;HRun=1;HaplotypeScore=73.4797;InbreedingCoeff=0.9661;MQ=77.01;MQ0=0;MQRankSum=-4.510;QD=38.51;ReadPosRankSum=2.246;VQSLOD=4.1415;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,52:52:99:2097,151,0	0/0:7,0:7:21.07:0,21,336	0/0:15,0:13:39.13:0,39,620	0/0:21,0:21:52.01:0,52,751	0/0:29,0:29:84.29:0,84,1339	0/0:26,0:26:75.26:0,75,1190	0/0:15,0:15:45.15:0,45,710	0/0:18,0:18:54.17:0,54,840	0/0:22,0:22:66.19:0,66,1008	0/0:32,0:32:96.28:0,96,1503	0/0:15,0:15:45.15:0,45,711	0/0:22,0:22:66.21:0,66,1028	0/0:20,0:20:60.20:0,60,958	0/0:25,0:25:75.21:0,75,1147	0/0:25,0:25:75.24:0,75,1176	0/0:16,0:16:48.16:0,48,766	0/0:27,0:27:81.28:0,81,1292	0/0:13,0:13:39.13:0,39,619	0/0:17,0:17:51.17:0,51,795	0/0:20,0:20:60.16:0,60,890	0/0:33,0:33:96.31:0,96,1495	0/0:20,0:20:60.20:0,60,959	0/0:11,0:11:33.11:0,33,527	0/0:15,0:15:45.15:0,45,719	0/0:22,0:22:60.20:0,60,956	0/0:28,0:28:84.28:0,84,1320	0/0:29,0:29:84.26:0,84,1312	0/0:4,0:4:12.04:0,12,192
chr10	73806077	.	TCTGCCCTCCC	T	3473.65	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.862;DP=513;FS=2.056;HRun=0;HaplotypeScore=162.9223;InbreedingCoeff=0.9772;MQ=76.33;MQ0=0;MQRankSum=-7.246;QD=58.88;ReadPosRankSum=1.247;VQSLOD=3.7671;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.32:0,93,4240	0/0:7,0:7:15.05:0,15,718	0/0:17,0:17:44.72:0,45,1190	0/0:16,0:16:26.90:0,27,841	0/0:18,0:18:48.16:0,48,2267	0/0:20,0:20:54.15:0,54,2425	0/0:13,0:13:36.12:0,36,1806	0/0:20,0:20:51.17:0,51,2075	0/0:18,0:18:48.16:0,48,2271	1/1:2,20:22:57.20:1726,57,0	1/1:1,18:19:30.10:720,30,0	0/0:17,0:17:48.16:0,48,2319	0/0:19,0:19:48.16:0,48,2399	0/0:24,0:24:66.23:0,66,3212	0/0:16,0:16:45.15:0,45,2208	0/0:15,0:15:42.14:0,42,2172	0/0:39,0:39:99:0,108,5218	0/0:5,0:5:15.05:0,15,777	0/0:12,0:12:36.12:0,36,1664	0/0:21,0:21:63.22:0,63,2994	0/0:32,0:32:87.26:0,87,3881	0/0:13,0:13:36.12:0,36,1594	0/0:14,0:14:42.14:0,42,1981	0/0:15,0:15:45.15:0,45,1970	1/1:0,18:18:33.11:1028,33,0	0/0:18,0:18:39.19:0,39,2378	0/0:28,0:28:78.27:0,78,3765	0/0:4,0:4:12.04:0,12,621
chr10	73807354	.	AT	A	383.12	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.116;DP=695;FS=3.779;HRun=3;HaplotypeScore=77.2579;InbreedingCoeff=0.9917;MQ=71.99;MQ0=0;MQRankSum=-2.307;QD=25.54;ReadPosRankSum=0.410;VQSLOD=2.8388;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.18:0,63,868	0/0:11,0:11:33.07:0,33,435	0/0:19,0:15:38.97:0,39,456	0/0:19,0:15:18.38:0,18,192	0/0:32,0:32:90.29:0,90,1276	0/0:36,0:36:99:0,105,1490	0/0:15,0:15:45.11:0,45,594	0/0:35,0:35:99:0,102,1436	0/0:26,0:26:78.23:0,78,1068	0/0:33,0:33:96.32:0,96,1382	0/0:26,0:26:69.23:0,69,992	0/0:28,0:28:81.26:0,81,1147	0/0:21,0:21:63.20:0,63,890	0/0:25,0:25:75.25:0,75,1079	0/0:24,0:24:72.24:0,72,1036	0/0:23,0:22:66.18:0,66,896	0/0:15,0:15:42.12:0,42,585	1/1:2,13:15:39.12:478,39,0	0/0:19,0:19:54.18:0,54,776	0/0:40,0:40:99:0,117,1645	0/0:22,0:22:60.07:0,60,834	0/0:29,0:29:84.25:0,84,1166	0/0:40,0:40:99:0,120,1707	0/0:18,0:18:48.13:0,48,669	0/0:22,0:22:63.21:0,63,906	0/0:32,0:32:93.30:0,93,1322	0/0:37,0:37:99:0,108,1497	0/0:11,0:11:30.10:0,30,432
chr10	73812800	.	T	TAGGCTCG	18233.75	PASS	AB=0.946;AC=22;AF=0.393;AN=56;BaseQRankSum=9.518;DP=713;FS=0.000;HRun=0;HaplotypeScore=186.6060;InbreedingCoeff=0.8403;MQ=86.32;MQ0=0;MQRankSum=-18.102;QD=62.88;ReadPosRankSum=0.381;VQSLOD=4.5820;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,29:43:90.31:3319,90,0	0/1:12,1:13:83.30:83,0,686	0/0:28,0:28:69.19:0,69,1505	0/0:28,0:28:60.20:0,60,1341	0/0:33,0:33:90.28:0,90,2085	0/0:36,0:36:99:0,99,2343	0/0:26,0:26:69.24:0,69,1684	0/0:38,0:38:96.33:0,96,2304	0/0:19,0:19:45.15:0,45,1109	1/1:12,13:26:66.22:2168,66,0	1/1:7,11:18:24.08:895,24,0	1/1:17,21:38:18.42:2983,18,0	1/1:12,23:35:84.25:2989,84,0	0/0:29,0:29:78.27:0,78,1922	0/0:24,0:24:63.20:0,63,1523	0/0:29,0:29:75.26:0,75,1843	0/0:25,0:25:72.19:0,72,1621	1/1:3,10:15:30.10:1137,30,0	0/0:23,0:22:69.20:0,69,1627	0/0:25,0:25:63.21:0,63,1509	0/0:25,0:25:57.18:0,57,1372	1/1:11,9:20:30.10:997,30,0	1/1:12,11:23:42.14:1538,42,0	1/1:10,11:21:30.06:1059,30,0	1/1:5,6:12:24.08:915,24,0	0/1:25,1:26:99:151,0,1493	0/0:32,0:32:90.31:0,90,2187	0/0:3,0:3:9.03:0,9,225
chr10	73812868	.	G	GT	6514.86	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.490;DP=747;FS=4.599;HRun=1;HaplotypeScore=104.9966;InbreedingCoeff=0.9586;MQ=76.41;MQ0=0;MQRankSum=-4.673;QD=38.55;ReadPosRankSum=1.989;VQSLOD=5.0197;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:35:84.24:1233,84,0	0/0:14,0:14:42.14:0,42,545	0/0:29,0:29:75.03:0,75,876	0/0:26,0:26:62.90:0,63,808	0/0:26,0:26:75.24:0,75,973	0/0:27,0:27:72.23:0,72,935	0/0:24,0:24:69.21:0,69,880	0/0:36,0:36:99:0,105,1339	0/0:25,0:25:75.24:0,75,974	0/0:26,0:26:75.21:0,75,956	0/0:17,0:17:48.16:0,48,623	1/1:1,29:30:84.25:1234,84,0	1/1:1,41:42:99:1750,120,0	0/0:27,0:27:78.25:0,78,1012	0/0:37,0:37:99:0,111,1441	0/0:33,0:33:99:0,99,1256	0/0:35,0:35:96.31:0,96,1247	0/0:24,0:24:63.20:0,63,818	0/0:14,0:14:39.13:0,39,506	0/0:28,0:28:78.25:0,78,1013	0/0:31,0:31:93.30:0,93,1208	1/1:1,23:24:66.22:989,66,0	1/1:0,19:19:51.17:764,51,0	1/1:2,17:19:3.18:545,3,0	0/0:17,0:17:48.16:0,48,623	0/0:38,0:38:99:0,114,1480	0/0:39,0:39:99:0,114,1433	0/0:5,0:5:12.04:0,12,156
chr10	73813493	.	TACACGCACAC	T	1671.75	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=0.630;DP=579;FS=1.603;HRun=0;HaplotypeScore=145.4420;InbreedingCoeff=0.1960;MQ=57.70;MQ0=20;MQRankSum=0.145;QD=9.04;ReadPosRankSum=0.585;VQSLOD=2.7890;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:6.02:133,6,0	0/0:13,0:12:34.75:0,35,799	0/0:46,0:15:41.67:0,42,315	0/0:39,0:15:32.96:0,33,180	0/0:16,0:14:26.79:0,27,246	0/0:17,0:17:50.91:0,51,1121	0/0:29,0:28:63.15:0,63,1098	0/0:27,0:27:71.13:0,71,539	0/0:18,0:18:43.55:0,44,431	0/1:12,0:12:56.76:153,0,57	1/1:1,0:10:2.90:16,3,0	0/1:23,0:23:99:202,0,478	0/1:26,0:26:99:257,0,538	0/0:22,0:22:56.74:0,57,760	0/0:20,0:20:38.94:0,39,837	0/0:17,0:17:41.90:0,42,893	0/0:32,0:32:69.68:0,70,2253	1/1:21,0:21:53.81:431,54,0	0/0:13,0:12:11.41:0,11,220	0/0:12,0:12:17.87:0,18,255	0/0:45,0:44:82.35:0,82,907	0/1:12,0:11:41.59:152,0,42	0/1:12,0:12:99:121,0,221	0/1:34,0:34:99:310,0,635	0/1:7,0:7:57.29:57,0,63	0/0:11,0:10:32.87:0,33,435	0/0:15,0:15:18.13:0,18,357	0/0:2,0:2:3.01:0,3,44
chr10	73813496	.	ACG	A	2947.42	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=3.524;DP=593;FS=11.522;HRun=0;HaplotypeScore=73.1098;InbreedingCoeff=0.8466;MQ=57.17;MQ0=20;MQRankSum=0.718;QD=14.96;ReadPosRankSum=-1.937;VQSLOD=1.8260;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:1.08:18,0,1	0/0:13,0:12:30.36:0,30,289	0/0:46,0:15:41.67:0,42,315	0/0:38,0:14:32.96:0,33,180	0/0:13,0:11:2.70:0,3,127	0/0:18,0:18:49.59:0,50,466	0/0:30,0:29:59.68:0,60,512	0/0:27,0:27:72.07:0,72,528	0/0:19,0:19:18.97:0,19,193	1/1:12,0:12:35.98:329,36,0	1/1:10,0:10:2.87:16,3,0	1/1:22,1:22:28.56:345,29,0	1/1:28,2:30:31.99:490,32,0	0/0:22,0:22:51.32:0,51,352	0/0:20,0:20:28.41:0,28,359	0/0:18,0:18:43.56:0,44,371	0/0:34,0:34:19.35:0,19,600	1/1:21,0:21:56.78:449,57,0	0/0:13,0:12:23.02:0,23,149	0/0:12,0:12:17.78:0,18,123	0/0:44,0:43:82.08:0,82,543	1/1:14,0:13:23.98:201,24,0	1/1:13,0:13:14.34:206,14,0	1/1:37,2:39:96.41:924,96,0	1/1:7,0:7:20.97:174,21,0	0/0:12,0:11:3.67:0,4,158	0/0:16,0:16:27.58:0,28,157	0/0:1,0:1:2.97:0,3,20
chr10	73813498	.	GCACA	G	635.30	PASS	AB=0.967;AC=20;AF=0.417;AN=48;BaseQRankSum=2.102;DP=612;FS=19.311;HRun=0;HaplotypeScore=102.7473;InbreedingCoeff=0.1476;MQ=56.44;MQ0=24;MQRankSum=0.600;QD=2.08;ReadPosRankSum=2.968;VQSLOD=0.6077;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:15.40:28,0,15	0/0:13,0:12:11.99:0,12,214	./.	./.	1/1:11,1:10:6.02:88,6,0	0/1:18,0:18:49.91:50,0,250	0/0:32,0:31:10.11:0,10,241	0/0:28,0:28:4.77:0,5,25	1/1:11,6:18:12.24:166,12,0	0/1:16,0:16:20.03:20,0,93	./.	0/0:23,0:22:21.01:0,21,282	0/0:33,0:33:31.19:0,31,379	1/1:19,0:19:8.99:94,9,0	0/0:15,0:19:23.78:0,24,369	0/1:16,1:17:27.99:28,0,258	0/1:33,1:35:1.82:2,0,639	0/0:22,0:22:1.25:0,1,3	0/1:13,2:15:6.50:66,0,6	0/0:8,0:12:0.47:0,0,1	0/1:50,0:46:15.96:16,0,40	0/0:14,0:13:3:0,3,25	0/0:14,0:13:2.56:0,3,69	0/1:39,0:39:21.71:22,0,205	1/1:8,0:8:1.55:4,2,0	1/1:12,0:11:7.55:71,8,0	1/1:10,7:17:7.95:130,8,0	./.
chr10	73816405	.	TTG	T	1619.36	PASS	AB=0.911;AC=18;AF=0.321;AN=56;BaseQRankSum=9.556;DP=739;FS=0.000;HRun=0;HaplotypeScore=121.0598;InbreedingCoeff=0.2995;MQ=66.27;MQ0=5;MQRankSum=-1.062;QD=4.64;ReadPosRankSum=1.090;VQSLOD=2.7084;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,24:35:59.63:619,60,0	0/1:7,1:8:16.78:17,0,216	0/0:38,0:24:27.53:0,28,343	0/0:33,0:21:27.53:0,28,356	0/0:27,1:28:16.32:0,16,684	0/1:23,2:25:30.54:31,0,476	0/0:26,0:26:32.09:0,32,726	0/1:26,1:27:7.21:7,0,320	0/0:17,1:18:7.30:0,7,574	1/1:18,0:40:48.60:239,49,0	1/1:6,0:26:26.49:129,26,0	0/0:13,0:29:38.99:0,39,342	0/0:12,0:27:36.01:0,36,337	0/1:24,4:29:70.04:70,0,793	0/0:31,0:31:58.07:0,58,1009	0/0:22,1:23:10.28:0,10,566	0/0:14,0:15:21.98:0,22,501	1/1:8,13:21:4.41:414,4,0	0/1:25,2:26:27.56:28,0,472	0/0:26,1:27:16.32:0,16,668	0/1:35,5:40:61.08:61,0,942	0/0:9,0:26:33.42:0,33,324	0/0:13,0:24:23.72:0,24,206	0/0:10,0:24:38.96:0,39,336	1/1:8,0:22:19.89:98,20,0	0/1:26,3:29:49.46:49,0,627	0/0:19,1:20:7.30:0,7,554	0/1:17,2:19:42.02:42,0,518
chr10	73817368	.	C	CCA	344.06	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.498;DP=722;FS=0.000;HRun=0;HaplotypeScore=96.9264;InbreedingCoeff=0.9840;MQ=86.48;MQ0=0;MQRankSum=-3.366;QD=31.28;ReadPosRankSum=1.499;VQSLOD=5.1839;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.28:0,81,1309	0/0:6,0:6:15.05:0,15,245	0/0:26,0:26:74.84:0,75,1082	0/0:25,0:23:57.12:0,57,850	0/0:35,0:35:99:0,105,1659	0/0:19,0:19:54.18:0,54,870	0/0:21,0:21:60.18:0,60,931	0/0:38,0:38:99:0,111,1812	0/0:17,0:17:51.17:0,51,827	0/0:44,0:44:99:0,126,2033	0/0:22,0:22:66.22:0,66,1059	0/0:18,0:18:51.17:0,51,823	0/0:31,0:31:93.32:0,93,1517	0/0:28,0:28:84.29:0,84,1352	0/0:36,0:36:99:0,105,1703	0/0:22,0:22:63.20:0,63,999	0/0:22,0:22:66.23:0,66,1069	1/1:0,10:11:33.11:439,33,0	0/0:19,0:19:57.19:0,57,921	0/0:32,0:32:90.31:0,90,1469	0/0:25,0:25:72.25:0,72,1175	0/0:26,0:26:78.27:0,78,1272	0/0:24,0:24:72.25:0,72,1173	0/0:30,0:30:90.31:0,90,1462	0/0:19,0:19:57.19:0,57,917	0/0:45,0:45:99:0,132,2140	0/0:37,0:36:99:0,111,1808	0/0:14,0:14:33.11:0,33,536
chr10	73817369	.	T	TG	203.01	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.398;DP=725;FS=0.000;HRun=0;HaplotypeScore=82.7187;InbreedingCoeff=0.9794;MQ=85.41;MQ0=0;MQRankSum=-2.621;QD=18.46;ReadPosRankSum=0.981;VQSLOD=5.4721;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.23:0,81,1110	0/0:6,0:6:15.05:0,15,210	0/0:24,0:24:69.20:0,69,931	0/0:25,0:23:57.65:0,58,762	0/0:33,0:33:99:0,99,1347	0/0:20,0:20:54.17:0,54,736	0/0:21,0:21:63.17:0,63,856	0/0:39,0:39:99:0,114,1576	0/0:17,0:17:51.17:0,51,713	0/0:45,0:45:99:0,132,1773	0/0:22,0:22:66.20:0,66,889	0/0:19,0:19:54.17:0,54,738	0/0:31,0:31:93.31:0,93,1301	0/0:28,0:28:84.27:0,84,1159	0/0:36,0:36:99:0,108,1475	0/0:21,0:21:63.20:0,63,864	0/0:23,0:23:66.21:0,66,904	1/1:0,11:11:33:298,33,0	0/0:19,0:19:57.19:0,57,798	0/0:32,0:32:93.30:0,93,1286	0/0:25,0:25:75.24:0,75,1032	0/0:26,0:26:78.26:0,78,1091	0/0:25,0:25:72.24:0,72,1005	0/0:30,0:30:90.30:0,90,1259	0/0:19,0:19:57.19:0,57,793	0/0:47,0:47:99:0,135,1848	0/0:37,0:36:99:0,111,1551	0/0:14,0:14:20.07:0,20,466
chr10	73817475	.	T	TTGTG	6083.10	PASS	AB=0.917;AC=19;AF=0.352;AN=54;BaseQRankSum=-2.215;DP=823;FS=4.991;HRun=0;HaplotypeScore=148.1676;InbreedingCoeff=0.8166;MQ=63.44;MQ0=7;MQRankSum=-1.795;QD=22.78;ReadPosRankSum=1.520;VQSLOD=4.7120;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:34:3.82:45,4,0	0/1:10,0:11:25.30:25,0,365	0/0:35,0:13:3.01:0,3,50	0/0:50,0:30:2.56:0,3,103	0/0:30,0:30:60.13:0,60,898	0/0:26,0:26:41.10:0,41,560	0/0:33,0:36:78.06:0,78,1135	0/0:48,0:48:78.25:0,78,1232	0/0:24,0:24:45.13:0,45,687	1/1:10,0:29:33.17:444,33,0	./.	1/1:12,19:33:59.67:1319,60,0	1/1:6,23:31:53.75:1189,54,0	0/0:34,0:37:87.22:0,87,1322	0/0:27,0:27:60.16:0,60,944	0/0:30,0:31:61.29:0,61,1231	0/0:16,0:21:22.93:0,23,619	1/1:10,0:19:8.03:81,8,0	0/0:20,0:21:27.08:0,27,420	0/0:36,0:38:66.20:0,66,1028	0/0:41,0:42:81.27:0,81,1301	1/1:5,7:19:26.56:531,27,0	1/1:9,14:25:38.53:873,39,0	1/1:16,24:41:65.70:1484,66,0	1/1:8,0:23:9.01:91,9,0	0/0:32,0:34:43.07:0,43,939	0/0:19,0:20:51.16:0,51,786	0/0:12,0:12:15.05:0,15,245
chr10	73820278	.	A	ACT	881.06	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=6.231;DP=630;FS=1.891;HRun=0;HaplotypeScore=76.6616;InbreedingCoeff=0.7238;MQ=55.46;MQ0=11;MQRankSum=-0.086;QD=16.02;ReadPosRankSum=0.825;VQSLOD=3.6967;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.30:0,90,1288	0/0:16,0:16:39.13:0,39,559	0/1:30,0:7:1.87:2,0,197	0/0:25,0:6:11.97:0,12,142	0/0:12,0:12:36.12:0,36,516	0/0:27,0:27:78.24:0,78,1094	0/0:28,0:28:75.24:0,75,1055	0/0:26,0:26:75.24:0,75,1059	0/0:22,0:22:63.21:0,63,901	0/0:20,0:20:60.17:0,60,839	0/0:15,0:15:42.14:0,42,601	0/0:28,0:28:78.23:0,78,1078	0/0:21,0:21:57.19:0,57,815	0/0:31,0:31:84.28:0,84,1202	0/0:26,0:26:75.24:0,75,1056	0/0:24,0:24:66.22:0,66,946	0/0:30,1:31:90.24:0,90,1264	1/1:3,22:25:57.20:975,57,0	0/0:13,0:7:18.06:0,18,258	0/0:15,0:14:42.14:0,42,600	0/0:37,0:37:99:0,99,1398	0/0:14,0:14:42.14:0,42,602	0/0:11,0:11:30.10:0,30,429	0/0:40,0:40:99:0,108,1486	0/0:15,0:15:42.12:0,42,567	0/0:17,0:17:48.15:0,48,673	0/0:22,0:22:63.19:0,63,882	0/0:5,0:5:15.05:0,15,215
chr10	73820425	.	TCAAAACAAAA	T	1870.97	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.039;DP=760;FS=5.224;HRun=0;HaplotypeScore=209.2144;InbreedingCoeff=0.8734;MQ=67.78;MQ0=4;MQRankSum=-8.117;QD=14.73;ReadPosRankSum=-0.434;VQSLOD=2.4291;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:43:60.12:0,60,628	0/0:15,0:15:30.09:0,30,1292	0/0:47,0:26:3.01:0,3,55	0/0:49,0:20:3.01:0,3,40	0/0:39,0:39:66.14:0,66,3079	0/0:17,0:17:30.10:0,30,1399	0/0:23,0:23:39.13:0,39,1710	0/0:31,0:31:15.02:0,15,213	0/0:28,0:28:45.14:0,45,2071	0/0:37,0:37:48.15:0,48,1941	0/0:21,0:21:42.14:0,42,2030	1/1:12,8:20:15.05:444,15,0	1/1:8,16:24:21.07:621,21,0	0/0:34,0:34:60.20:0,60,2809	0/0:28,0:28:39.13:0,39,1890	0/0:16,0:16:39.13:0,39,1852	0/0:44,0:44:78.21:0,78,3015	1/1:25,0:25:9.03:165,9,0	0/0:19,0:18:21.07:0,21,1039	0/0:26,0:27:42.13:0,42,1723	0/0:30,0:30:27.09:0,27,1151	1/1:15,3:18:6.02:174,6,0	1/1:8,7:15:15.01:375,15,0	1/1:16,9:25:9.03:265,9,0	0/0:16,0:16:27.07:0,27,1172	0/0:29,0:29:48.12:0,48,1846	0/0:25,0:25:60.16:0,60,2482	0/0:15,0:15:21.05:0,21,898
chr10	73820456	.	CAAAACAAAACAAAACA	C	319.36	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.309;DP=736;FS=15.465;HRun=0;HaplotypeScore=281.8766;InbreedingCoeff=0.9459;MQ=55.81;MQ0=13;MQRankSum=-3.979;QD=16.81;ReadPosRankSum=-0.428;VQSLOD=0.6864;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:96.32:0,96,2851	0/0:15,0:15:45.13:0,45,2419	0/0:29,0:10:19.67:0,20,285	0/0:38,0:10:16.79:0,17,393	0/0:42,0:42:99:0,114,6206	0/0:18,0:18:51.17:0,51,3252	0/0:25,0:25:74.28:0,74,3927	0/0:38,0:37:99:0,99,2264	0/0:26,0:26:69.16:0,69,3866	0/0:32,0:32:92.34:0,92,4401	0/0:25,0:25:72.24:0,72,3664	0/0:24,0:24:56.51:0,57,1036	0/0:29,0:29:50.20:0,50,565	0/0:33,0:33:93.30:0,93,5540	0/0:25,0:25:72.23:0,72,3753	0/0:19,0:19:57.19:0,57,3566	0/0:41,0:42:99:0,117,6152	1/1:3,16:19:12.04:405,12,0	0/0:21,0:13:35.95:0,36,1879	0/0:27,0:27:75.25:0,75,4046	0/0:21,0:21:57.19:0,57,2928	0/0:10,0:10:20.90:0,21,353	0/0:17,0:17:41.60:0,42,678	0/0:18,0:18:22.93:0,23,324	0/0:19,0:19:51.17:0,51,2426	0/0:34,0:34:96.32:0,96,4509	0/0:29,0:29:87.30:0,87,4922	0/0:19,0:19:45.15:0,45,1935
chr10	73820763	.	GA	G	1224.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.791;DP=734;FS=4.397;HRun=1;HaplotypeScore=68.6317;InbreedingCoeff=1.0000;MQ=83.98;MQ0=0;MQRankSum=-3.428;QD=37.10;ReadPosRankSum=1.083;VQSLOD=4.1133;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:96.29:1319,96,0	0/0:17,0:17:51.17:0,51,815	0/0:26,0:26:78.23:0,78,1141	0/0:25,0:25:66.11:0,66,961	0/0:46,0:46:99:0,138,2157	0/0:29,0:29:87.30:0,87,1391	0/0:18,0:18:54.16:0,54,817	0/0:34,0:34:99:0,102,1589	0/0:20,0:20:60.20:0,60,959	0/0:30,0:30:90.31:0,90,1440	0/0:20,0:20:57.19:0,57,908	0/0:17,0:17:51.17:0,51,813	0/0:24,0:24:72.23:0,72,1120	0/0:23,0:23:69.22:0,69,1077	0/0:24,0:24:72.23:0,72,1128	0/0:29,0:29:87.29:0,87,1369	0/0:21,0:21:60.20:0,60,959	0/0:21,0:21:60.20:0,60,959	0/0:29,0:29:87.30:0,87,1391	0/0:26,0:26:75.26:0,75,1199	0/0:32,0:32:90.29:0,90,1415	0/0:26,0:26:78.27:0,78,1247	0/0:26,0:26:72.25:0,72,1148	0/0:16,0:16:48.16:0,48,767	0/0:27,0:27:81.28:0,81,1291	0/0:35,0:35:99:0,105,1678	0/0:30,0:30:90.31:0,90,1438	0/0:30,0:30:87.30:0,87,1390
chr10	73821588	.	AG	A	2212.53	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.322;DP=736;FS=0.513;HRun=1;HaplotypeScore=77.3482;InbreedingCoeff=0.9989;MQ=76.53;MQ0=0;MQRankSum=-4.656;QD=38.15;ReadPosRankSum=0.766;VQSLOD=4.1426;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,58:58:99:2307,166,0	0/0:9,0:9:27.09:0,27,432	0/0:17,0:17:48.15:0,48,726	0/0:16,0:16:45.15:0,45,684	0/0:22,0:22:66.23:0,66,1052	0/0:23,0:23:69.24:0,69,1101	0/0:24,0:24:72.25:0,72,1148	0/0:32,0:32:96.33:0,96,1532	0/0:28,0:28:84.27:0,84,1320	0/0:29,0:29:84.29:0,84,1341	0/0:15,0:15:45.15:0,45,718	0/0:35,0:35:99:0,105,1632	0/0:26,0:26:78.27:0,78,1244	0/0:38,0:38:99:0,111,1750	0/0:37,0:37:99:0,111,1771	0/0:37,0:37:99:0,111,1770	0/0:30,0:30:90.28:0,90,1413	0/0:24,0:23:72.20:0,72,1120	0/0:25,0:25:75.23:0,75,1171	0/0:18,0:18:54.18:0,54,863	0/0:38,0:38:99:0,114,1791	0/0:15,0:15:45.15:0,45,719	0/0:19,0:19:57.18:0,57,888	0/0:21,0:21:63.21:0,63,1005	0/0:36,0:36:99:0,108,1727	0/0:23,0:23:69.24:0,69,1102	0/0:28,0:28:84.29:0,84,1339	0/0:13,0:13:39.11:0,39,599
chr10	73823220	.	GGT	G	307.92	PASS	AB=0.919;AC=18;AF=0.346;AN=52;BaseQRankSum=2.528;DP=477;FS=1.897;HRun=0;HaplotypeScore=83.5786;InbreedingCoeff=-0.1047;MQ=59.16;MQ0=10;MQRankSum=1.134;QD=1.16;ReadPosRankSum=2.100;VQSLOD=1.4117;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:21:8.73:9,0,58	1/1:5,0:5:3.01:33,3,0	0/0:19,0:7:0.47:0,0,1	./.	0/1:24,3:28:3.30:3,0,293	0/1:20,1:22:16.67:17,0,213	0/1:15,1:17:45.40:45,0,74	1/1:17,0:17:3.01:30,3,0	0/1:11,3:14:76.81:77,0,137	0/0:24,0:25:44.92:0,45,456	0/0:19,0:20:5.99:0,6,50	0/0:10,0:12:2.73:0,3,26	0/0:14,0:14:0.41:0,0,1	0/0:9,0:14:15.01:0,15,149	0/1:16,1:17:5.57:6,0,301	0/1:14,1:15:8.56:9,0,268	0/1:29,3:32:1.19:1,0,481	0/0:13,0:13:21.07:0,21,292	1/1:14,0:14:2.84:14,3,0	0/1:16,6:22:99:166,0,119	0/0:15,0:15:9.02:0,9,111	0/0:11,0:12:5.99:0,6,48	./.	0/1:14,0:15:0:0,0,0	0/0:15,0:15:3:0,3,26	0/1:14,0:14:22.36:22,0,77	0/0:21,1:22:0.20:0,0,347	0/1:9,0:9:7.52:8,0,119
chr10	73824397	.	CA	C	3089	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.456;DP=812;FS=0.416;HRun=2;HaplotypeScore=87.0702;InbreedingCoeff=0.9985;MQ=79.96;MQ0=0;MQRankSum=-3.072;QD=34.71;ReadPosRankSum=2.073;VQSLOD=3.9728;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,166,2408	0/0:15,0:15:45.15:0,45,675	0/0:37,0:37:75.25:0,75,1274	0/0:27,0:27:66.22:0,66,959	0/0:24,0:24:69.23:0,69,1031	0/0:22,0:22:66.22:0,66,984	0/0:19,0:19:57.19:0,57,851	0/0:35,0:35:99:0,105,1555	0/0:25,0:25:69.22:0,69,1011	1/1:1,31:32:90.29:1167,90,0	1/1:1,26:27:78.25:1013,78,0	0/0:27,0:27:81.27:0,81,1210	0/0:39,0:39:99:0,111,1593	0/0:36,0:36:99:0,102,1483	0/0:40,0:40:99:0,120,1798	0/0:36,0:36:99:0,108,1618	0/0:28,0:28:81.27:0,81,1211	0/0:12,0:12:33.11:0,33,495	0/0:26,0:26:75.24:0,75,1104	0/0:21,0:21:60.19:0,60,880	0/0:42,0:42:99:0,120,1780	0/0:34,0:34:99:0,102,1507	0/0:27,0:27:81.27:0,81,1208	0/0:32,0:32:96.32:0,96,1432	1/1:2,28:30:81.26:1052,81,0	0/0:29,0:29:81.26:0,81,1193	0/0:24,0:24:72.23:0,72,1057	0/0:8,0:8:21.07:0,21,315
chr10	73826878	.	AG	A	247.50	PASS	AB=0.833;AC=3;AF=0.054;AN=56;BaseQRankSum=6.120;DP=620;FS=2.579;HRun=4;HaplotypeScore=89.6828;InbreedingCoeff=0.6111;MQ=57.86;MQ0=58;MQRankSum=6.135;QD=5.38;ReadPosRankSum=-1.606;VQSLOD=-0.3642;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:20:24.08:0,24,335	0/0:5,0:5:12.04:0,12,168	1/1:17,4:9:19.23:192,19,0	0/1:20,5:10:21.94:160,0,22	0/0:23,0:23:32.98:0,33,460	0/0:25,0:25:45.12:0,45,583	0/0:15,0:14:26.86:0,27,266	0/0:36,0:27:78.13:0,78,1023	0/0:22,0:22:42.14:0,42,582	0/0:38,0:38:99:0,111,1550	0/0:31,0:31:54.18:0,54,741	0/0:16,0:16:33.10:0,33,444	0/0:24,0:24:39.08:0,39,541	0/0:27,0:27:57.19:0,57,792	0/0:23,0:23:39:0,39,533	0/0:26,0:26:63.21:0,63,870	0/0:19,0:15:33.10:0,33,444	0/0:20,0:13:24.01:0,24,295	0/0:14,0:11:33.11:0,33,462	0/0:29,0:29:75.22:0,75,1006	0/0:19,0:17:45.04:0,45,574	0/0:23,0:23:42.14:0,42,587	0/0:21,0:21:33.07:0,33,430	0/0:8,0:8:18.06:0,18,252	0/0:22,0:22:57.02:0,57,698	0/0:24,0:23:69.23:0,69,964	0/0:33,0:32:69.11:0,69,934	0/0:8,0:6:11.87:0,12,168
chr10	73826939	.	CT	C	6086.59	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=9.549;DP=551;FS=0.739;HRun=2;HaplotypeScore=60.0605;InbreedingCoeff=0.9967;MQ=62.07;MQ0=7;MQRankSum=2.201;QD=37.57;ReadPosRankSum=-0.038;VQSLOD=5.1910;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.15:0,51,786	0/0:5,0:5:15.05:0,15,238	0/0:11,0:10:27.09:0,27,418	0/0:14,0:13:39.12:0,39,563	0/0:26,0:26:72.24:0,72,1139	0/0:23,0:23:66.23:0,66,1054	0/0:15,0:15:45.15:0,45,717	0/0:31,0:30:75.24:0,75,1167	0/0:13,0:13:36.12:0,36,575	1/1:0,30:30:87.25:1194,87,0	1/1:0,23:23:60.20:835,60,0	1/1:0,18:18:51.17:707,51,0	1/1:0,23:23:66.11:923,66,0	0/0:31,0:31:84.29:0,84,1329	0/0:22,0:22:57.19:0,57,909	0/0:17,0:17:45.14:0,45,695	0/0:21,0:21:60.16:0,60,928	0/0:15,0:15:42.14:0,42,664	0/0:15,0:11:33.11:0,33,525	0/0:29,0:29:87.30:0,87,1380	0/0:17,0:17:51.17:0,51,809	1/1:0,20:20:54.18:751,54,0	1/1:0,21:21:48.16:671,48,0	1/1:0,11:11:30.10:419,30,0	1/1:0,16:16:42.14:587,42,0	0/0:26,0:25:75.19:0,75,1137	0/0:30,0:29:78.27:0,78,1242	0/0:9,0:9:24.08:0,24,384
chr10	73834122	.	CT	C	1474.42	PASS	AB=0.775;AC=18;AF=0.321;AN=56;BaseQRankSum=5.353;DP=562;FS=4.439;HRun=14;HaplotypeScore=65.4102;InbreedingCoeff=0.4601;MQ=70.84;MQ0=0;MQRankSum=0.565;QD=6.17;ReadPosRankSum=2.890;VQSLOD=2.6251;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,12:15:30.82:197,31,0	0/0:9,1:11:9.40:0,9,221	0/0:28,0:13:19.48:0,19,140	0/1:17,0:15:1.04:1,0,54	0/0:19,1:22:11.42:0,11,257	0/0:13,2:16:9.05:0,9,188	0/0:11,1:12:6.19:0,6,177	0/1:27,4:31:17.85:18,0,268	0/1:21,1:22:0.53:1,0,378	1/1:8,20:29:58.40:393,58,0	1/1:6,18:25:13.11:203,13,0	1/1:6,8:15:25.81:170,26,0	0/1:5,8:16:25.79:106,0,26	0/0:18,2:21:29.88:0,30,368	0/0:27,1:30:38.36:0,38,484	0/0:18,0:21:46.54:0,47,396	0/0:16,2:18:15.53:0,16,284	0/0:8,1:11:6.02:0,6,164	0/0:17,1:18:12.37:0,12,243	0/0:33,0:35:51.69:0,52,437	0/0:8,5:14:3.13:0,3,146	0/1:2,5:7:12.98:67,0,13	1/1:5,15:20:10.78:219,11,0	0/1:7,9:17:29.81:103,0,30	1/1:8,17:25:4.15:176,4,0	0/0:26,2:29:15.41:0,15,384	0/0:28,0:28:52.90:0,53,442	0/0:8,0:8:18.02:0,18,167
chr10	73836148	.	AAACAAC	A	6040.96	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.901;DP=702;FS=1.327;HRun=0;HaplotypeScore=152.9138;InbreedingCoeff=0.9975;MQ=60.43;MQ0=3;MQRankSum=-13.403;QD=34.72;ReadPosRankSum=1.414;VQSLOD=4.9332;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:45:88.14:0,88,2200	0/0:15,0:15:30.10:0,30,946	0/0:33,0:23:30.57:0,31,836	0/0:27,0:21:33.08:0,33,893	0/0:26,0:26:63.22:0,63,2036	0/0:28,0:28:75.26:0,75,2404	0/0:19,0:19:54.17:0,54,1699	0/0:34,0:34:63.22:0,63,1958	0/0:23,0:23:54.19:0,54,1786	1/1:6,11:18:36.12:724,36,0	1/1:6,13:19:36.04:623,36,0	1/1:4,13:17:30.10:633,30,0	1/1:5,21:25:57.20:1198,57,0	0/0:23,0:23:45.15:0,45,1473	0/0:30,0:30:78.21:0,78,2398	0/0:38,0:38:96.33:0,96,3139	0/0:21,0:20:54.14:0,54,1502	0/0:5,0:15:29.58:0,30,187	0/0:18,0:18:24.08:0,24,795	0/0:24,0:24:63.22:0,63,2069	0/0:31,0:31:54.19:0,54,1758	1/1:8,16:24:48.16:912,48,0	1/1:7,12:19:24.08:483,24,0	1/1:13,8:21:17.90:379,18,0	1/1:8,22:30:54.18:1088,54,0	0/0:24,0:24:60.21:0,60,1902	0/0:37,0:37:90.31:0,90,2913	0/0:17,0:17:47.96:0,48,1383
chr10	73842976	.	C	CAA	1140.67	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.657;DP=602;FS=4.750;HRun=1;HaplotypeScore=92.2604;InbreedingCoeff=0.4842;MQ=60.25;MQ0=6;MQRankSum=-1.341;QD=30.02;ReadPosRankSum=3.736;VQSLOD=3.7323;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,35:37:59.56:1235,60,0	0/0:13,0:13:38.87:0,39,406	0/0:21,0:10:23.21:0,23,282	0/0:27,0:23:55.24:0,55,606	0/0:29,0:29:59.08:0,59,736	0/0:31,0:31:72.29:0,72,1106	0/0:21,0:21:63.03:0,63,688	0/0:46,0:46:99:0,126,1372	0/0:19,0:19:54.07:0,54,688	0/0:18,0:17:47.40:0,47,328	0/0:11,0:11:5.99:0,6,49	0/0:23,0:23:17.70:0,18,161	0/0:11,0:10:20.79:0,21,152	0/0:21,0:21:59.96:0,60,626	0/0:23,0:23:69.07:0,69,832	0/0:24,0:24:71.79:0,72,815	0/0:25,0:25:69.11:0,69,908	0/0:7,0:7:1.54:0,2,69	0/0:19,0:19:48.46:0,48,463	0/0:20,0:20:55.67:0,56,720	0/0:38,0:36:98.19:0,98,1218	0/0:9,0:9:5.99:0,6,49	0/0:15,0:15:0.75:0,1,69	0/0:16,0:16:9.72:0,10,92	0/0:25,0:23:1.41:0,1,107	0/0:23,0:23:66.06:0,66,816	0/0:23,0:23:60.07:0,60,731	0/0:6,0:6:14.92:0,15,130
chr10	73843121	.	CT	C	174.91	PASS	AB=0.888;AC=4;AF=0.071;AN=56;BaseQRankSum=6.652;DP=593;FS=1.638;HRun=10;HaplotypeScore=65.6691;InbreedingCoeff=0.4354;MQ=71.72;MQ0=1;MQRankSum=-3.873;QD=4.16;ReadPosRankSum=-0.168;VQSLOD=0.3215;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:32.90:267,33,0	0/0:10,0:11:32.58:0,33,341	0/0:23,0:13:26.57:0,27,226	0/0:24,0:19:28.57:0,29,305	0/0:25,1:27:36.17:0,36,665	0/0:21,0:21:60.16:0,60,663	0/0:9,1:10:1.04:0,1,239	0/0:46,0:46:99:0,108,1190	0/0:17,0:17:45.12:0,45,498	0/0:27,0:27:75.20:0,75,823	0/0:13,0:13:27.06:0,27,289	0/0:18,0:18:45.12:0,45,498	0/0:18,1:18:16.05:0,16,396	0/0:20,2:22:8.05:0,8,545	0/0:21,1:22:34.11:0,34,604	0/0:20,0:21:34.47:0,34,493	0/0:31,0:31:81.20:0,81,886	0/0:20,0:20:54.08:0,54,561	0/0:17,1:19:44.92:0,45,466	0/0:37,0:37:89.82:0,90,963	0/0:16,0:17:44.95:0,45,479	0/1:16,2:18:3.98:4,0,416	0/0:23,0:23:65.99:0,66,697	0/0:19,1:20:28.08:0,28,529	0/0:21,0:21:57.15:0,57,630	0/0:16,0:16:37.73:0,38,458	0/0:26,0:25:72.13:0,72,768	0/1:6,1:7:8:8,0,148
chr10	73843132	.	GTTTGTTTTGT	G	775.15	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.995;DP=601;FS=3.870;HRun=0;HaplotypeScore=174.6155;InbreedingCoeff=0.9500;MQ=69.15;MQ0=3;MQRankSum=-4.446;QD=43.06;ReadPosRankSum=-1.157;VQSLOD=3.3625;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,10:18:33.11:870,33,0	0/0:14,0:14:27.09:0,27,1268	0/0:23,0:12:10.98:0,11,666	0/0:29,0:22:32.72:0,33,529	0/0:23,0:23:63.20:0,63,2827	0/0:23,0:23:66.23:0,66,3155	0/0:9,0:9:21.07:0,21,1028	0/0:44,0:44:81.26:0,81,3256	0/0:18,0:18:48.15:0,48,2006	0/0:28,0:28:69.23:0,69,3065	0/0:12,0:12:36.12:0,36,1716	0/0:16,0:16:39.13:0,39,1685	0/0:17,0:16:45.15:0,45,2132	0/0:24,0:24:60.20:0,60,2705	0/0:22,0:22:57.20:0,57,2688	0/0:19,0:19:45.15:0,45,2014	0/0:30,0:30:84.26:0,84,3868	0/0:24,0:24:55.69:0,56,2636	0/0:20,0:19:36.11:0,36,1461	0/0:37,0:37:99:0,99,4380	0/0:15,0:15:33.11:0,33,1617	0/0:20,0:20:48.15:0,48,1948	0/0:25,0:25:63.21:0,63,2855	0/0:21,0:21:57.18:0,57,2557	0/0:19,0:19:48.16:0,48,2358	0/0:18,0:18:48.15:0,48,2192	0/0:26,0:25:66.22:0,66,3191	0/0:6,0:6:18.06:0,18,903
chr10	73843141	.	GT	G	188.48	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.417;DP=621;FS=9.713;HRun=4;HaplotypeScore=69.6082;InbreedingCoeff=0.7224;MQ=67.44;MQ0=3;MQRankSum=-4.143;QD=8.57;ReadPosRankSum=-0.960;VQSLOD=-0.1722;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,8:22:1.49:264,1,0	0/0:11,0:11:33.10:0,33,445	0/0:24,1:14:31.22:0,31,335	0/0:30,0:22:35.02:0,35,406	0/0:25,0:25:72.24:0,72,1006	0/0:25,0:25:75.25:0,75,1047	0/0:7,0:7:21.07:0,21,294	0/0:41,0:41:99:0,114,1523	0/0:20,0:20:60.20:0,60,837	0/0:26,0:26:75.25:0,75,1049	0/0:14,0:14:42.14:0,42,587	0/0:16,0:16:48.16:0,48,662	0/0:18,0:17:48.16:0,48,663	0/0:23,0:23:69.22:0,69,949	0/0:24,0:24:69.23:0,69,962	0/0:20,0:20:60.15:0,60,791	0/0:34,0:34:99:0,99,1364	0/0:22,0:22:58.05:0,58,819	0/0:23,0:22:63.17:0,63,808	0/0:39,0:39:99:0,108,1507	0/0:15,0:15:42.11:0,42,566	0/0:19,0:19:54.16:0,54,735	0/0:25,1:26:73.08:0,73,936	0/0:23,0:23:63.21:0,63,878	0/0:20,0:20:57.15:0,57,760	0/0:18,0:18:54.17:0,54,740	0/0:28,0:27:78.17:0,78,1072	0/0:7,0:7:21.07:0,21,294
chr10	73844434	.	AT	A	642.22	PASS	AB=0.840;AC=23;AF=0.411;AN=56;BaseQRankSum=3.257;DP=469;FS=1.671;HRun=16;HaplotypeScore=84.1734;InbreedingCoeff=0.4502;MQ=66.59;MQ0=10;MQRankSum=0.714;QD=2.51;ReadPosRankSum=2.798;VQSLOD=-0.2944;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:14:11.36:32,11,0	0/1:11,2:13:29.55:30,0,99	0/0:17,1:11:5.73:0,6,40	0/1:15,1:9:1.08:1,0,10	0/1:14,3:18:22.80:23,0,50	0/0:13,0:12:23.85:0,24,186	0/0:18,0:18:16.33:0,16,129	0/0:28,1:29:50.56:0,51,394	0/0:7,0:7:14.92:0,15,115	1/1:8,1:17:21.17:70,21,0	1/1:4,0:8:10.17:30,10,0	1/1:8,1:9:13.66:66,14,0	0/1:11,4:18:18.54:76,0,19	0/0:12,0:12:6.06:0,6,78	0/0:21,1:22:14.67:0,15,202	0/0:19,0:20:36.28:0,36,250	0/1:31,3:32:17.97:18,0,208	1/1:5,0:18:16.22:47,16,0	0/0:14,0:14:25.81:0,26,190	0/1:16,1:18:3.30:3,0,152	0/0:15,0:15:2.93:0,3,104	0/1:9,6:15:37.26:82,0,37	1/1:10,3:12:20.34:120,20,0	1/1:13,5:21:31.85:168,32,0	1/1:4,0:16:24.40:70,24,0	0/0:16,0:18:25.29:0,25,201	0/0:18,1:21:14.44:0,14,179	0/0:4,0:4:6.88:0,7,52
chr10	73844455	.	C	CT	427.70	PASS	AB=0.938;AC=16;AF=0.286;AN=56;BaseQRankSum=1.534;DP=483;FS=3.307;HRun=13;HaplotypeScore=71.1344;InbreedingCoeff=0.3969;MQ=46.86;MQ0=17;MQRankSum=-3.847;QD=2.64;ReadPosRankSum=-0.323;VQSLOD=-0.4137;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,7:18:17.53:126,18,0	0/1:8,0:8:15.08:15,0,32	0/1:5,0:2:0:0,0,0	0/0:11,0:4:0.47:0,0,1	0/0:11,0:12:4.90:0,5,26	0/0:13,0:12:10.81:0,11,67	0/1:13,4:17:16.16:16,0,50	0/0:30,0:27:10:0,10,160	1/1:8,0:8:2.74:12,3,0	1/1:14,5:19:15.02:139,15,0	1/1:8,6:12:14.51:121,15,0	0/0:13,0:15:10.68:0,11,67	0/0:20,0:20:2.50:0,3,7	0/0:13,0:14:14.68:0,15,102	0/0:17,0:16:8.55:0,9,61	0/0:21,0:23:14.15:0,14,105	0/0:36,0:33:24.53:0,25,163	0/1:16,3:17:19.18:19,0,32	0/1:18,1:20:14.27:14,0,133	0/0:17,0:17:7.89:0,8,60	0/1:13,0:14:6.19:6,0,54	0/0:21,0:21:24.28:0,24,146	0/0:13,0:16:10.30:0,10,56	0/0:26,0:26:14.51:0,15,102	1/1:14,4:17:15.80:124,16,0	0/0:18,0:19:19.70:0,20,129	0/0:14,0:17:22.78:0,23,117	0/0:10,0:5:2:0,2,6
chr10	73844986	.	AGGTTAAGTT	A	6415.87	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.353;DP=693;FS=0.000;HRun=0;HaplotypeScore=199.6850;InbreedingCoeff=0.9983;MQ=74.34;MQ0=0;MQRankSum=-13.457;QD=66.83;ReadPosRankSum=2.347;VQSLOD=4.4894;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.25:0,72,3572	0/0:9,0:9:27.09:0,27,1263	0/0:20,0:20:57.06:0,57,2045	0/0:21,0:20:57.14:0,57,2436	0/0:26,0:26:78.24:0,78,3497	0/0:28,0:27:84.29:0,84,3981	0/0:21,0:21:60.21:0,60,2805	0/0:52,0:52:99:0,154,6482	0/0:23,0:23:69.22:0,69,2807	0/0:22,0:22:66.19:0,66,2759	0/0:21,0:21:63.22:0,63,2987	1/1:0,26:26:57.15:1715,57,0	1/1:0,18:18:45.04:1259,45,0	0/0:27,0:27:81.23:0,81,3550	0/0:26,0:26:72.20:0,72,3020	0/0:24,0:24:72.25:0,72,3573	0/0:27,0:27:78.23:0,78,3515	0/0:21,0:21:60.21:0,60,2701	0/0:19,0:19:57.19:0,57,2406	0/0:15,0:15:42.13:0,42,1959	0/0:48,0:48:99:0,144,6854	1/1:0,17:17:45.11:1325,45,0	1/1:0,18:18:48.12:1438,48,0	1/1:1,16:17:23.66:679,24,0	0/0:37,0:37:99:0,111,4807	0/0:35,0:35:99:0,102,4917	0/0:44,0:44:99:0,132,6210	0/0:7,0:7:21.07:0,21,1042
chr10	73845385	.	TG	T	450.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.122;DP=768;FS=1.019;HRun=1;HaplotypeScore=71.9263;InbreedingCoeff=0.9979;MQ=79.90;MQ0=0;MQRankSum=0.040;QD=30.00;ReadPosRankSum=1.093;VQSLOD=3.4131;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,2107	0/0:16,0:16:48.12:0,48,718	0/0:19,0:19:53.73:0,54,778	0/0:17,0:17:43.32:0,43,662	0/0:33,0:33:96.31:0,96,1498	0/0:37,0:37:99:0,111,1747	0/0:25,0:25:75.24:0,75,1173	0/0:32,0:32:93.30:0,93,1443	0/0:32,0:32:96.31:0,96,1503	0/0:34,0:34:99:0,102,1583	0/0:28,0:28:84.26:0,84,1291	0/0:21,0:21:63.21:0,63,1005	0/0:23,0:23:69.22:0,69,1076	0/0:42,0:42:99:0,126,2003	0/0:21,0:21:63.20:0,63,977	0/0:31,0:31:93.32:0,93,1480	0/0:41,0:41:99:0,123,1939	1/1:0,15:15:39.13:545,39,0	0/0:22,0:22:66.17:0,66,1005	0/0:31,0:31:93.30:0,93,1454	0/0:36,0:36:99:0,108,1670	0/0:29,0:29:87.30:0,87,1383	0/0:26,0:26:78.25:0,78,1219	0/0:26,0:26:78.25:0,78,1221	0/0:21,0:21:63.21:0,63,999	0/0:34,0:34:99:0,99,1520	0/0:23,0:23:69.24:0,69,1096	0/0:8,0:8:24.08:0,24,383
chr10	73845576	.	AT	A	861.25	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.986;DP=608;FS=2.192;HRun=8;HaplotypeScore=55.7656;InbreedingCoeff=0.8737;MQ=73.97;MQ0=0;MQRankSum=-1.742;QD=21.01;ReadPosRankSum=1.400;VQSLOD=3.8400;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,37:41:99:956,99,0	0/0:5,0:5:15.05:0,15,181	0/0:13,0:13:26.75:0,27,296	0/0:8,0:8:5.04:0,5,156	0/0:26,0:26:75.23:0,75,906	0/0:23,0:23:57.17:0,57,689	0/0:21,0:21:48.15:0,48,579	0/0:34,0:34:75.23:0,75,906	0/0:23,0:23:66.19:0,66,785	0/0:27,0:27:78.22:0,78,920	0/0:18,0:18:51.15:0,51,606	0/0:17,0:17:48.15:0,48,580	0/0:19,0:19:57.17:0,57,678	0/0:25,0:25:72.18:0,72,834	0/0:23,0:23:60.18:0,60,725	0/0:24,0:24:72.20:0,72,856	0/0:28,0:28:75.20:0,75,891	0/0:11,0:11:33.08:0,33,385	0/0:18,0:18:51.13:0,51,588	0/0:31,0:31:84.25:0,84,1003	0/0:14,0:14:39.12:0,39,471	0/0:27,0:27:72.22:0,72,870	0/0:24,0:24:72.19:0,72,839	0/0:20,0:20:57.17:0,57,678	0/0:25,0:25:60.16:0,60,702	0/0:18,0:18:45.14:0,45,544	0/0:37,0:36:99:0,99,1184	0/0:8,0:8:24.07:0,24,290
chr10	73845848	.	T	TGG	793.07	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-4.885;DP=519;FS=9.527;HRun=7;HaplotypeScore=60.8062;InbreedingCoeff=0.6542;MQ=83.31;MQ0=0;MQRankSum=-0.960;QD=21.43;ReadPosRankSum=1.376;VQSLOD=1.1133;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:54.18:886,54,0	0/0:11,0:11:30.07:0,30,339	0/0:19,0:19:18.93:0,19,359	0/1:13,0:13:7.73:8,0,156	0/0:27,0:27:72.16:0,72,817	0/0:22,0:22:66.20:0,66,769	0/0:19,0:19:45.10:0,45,514	0/0:27,0:27:54.14:0,54,629	0/0:11,0:10:27.04:0,27,292	0/0:24,0:24:63.17:0,63,727	0/0:32,0:32:87.25:0,87,1013	0/0:16,0:16:39.11:0,39,454	0/0:15,0:15:42.12:0,42,489	0/0:20,0:20:57.14:0,57,643	0/0:20,0:20:60.17:0,60,689	0/0:15,0:15:30.07:0,30,350	0/0:17,0:17:48.12:0,48,547	0/0:24,0:24:59.93:0,60,698	0/0:18,0:18:39.09:0,39,446	0/0:24,0:24:72.21:0,72,839	0/0:6,0:6:15.04:0,15,175	0/0:8,0:8:21.06:0,21,244	0/0:22,0:22:60.18:0,60,699	0/0:7,0:7:12.03:0,12,140	0/0:22,0:22:57.12:0,57,633	0/0:25,0:25:63.17:0,63,734	0/0:22,0:22:60.17:0,60,698	0/0:8,0:8:24.07:0,24,280
chr10	73846380	.	GATAC	G	1522.49	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.802;DP=590;FS=4.181;HRun=0;HaplotypeScore=104.9358;InbreedingCoeff=0.9823;MQ=70.14;MQ0=0;MQRankSum=-3.794;QD=23.42;ReadPosRankSum=-0.124;VQSLOD=2.9532;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:78.25:0,78,1784	0/0:5,0:5:12.03:0,12,245	0/0:16,0:15:35.40:0,35,552	0/0:17,0:17:36.18:0,36,620	0/0:22,0:22:51.01:0,51,1147	0/0:21,0:21:54.17:0,54,1327	0/0:20,0:20:57.15:0,57,1275	0/0:44,0:44:99:0,114,2512	0/0:28,0:28:75.23:0,75,1737	1/1:5,20:25:53.84:789,54,0	1/1:4,17:21:18.05:293,18,0	0/0:23,0:21:36.02:0,36,805	0/0:21,0:19:27.07:0,27,592	0/0:28,0:28:63.20:0,63,1504	0/0:20,0:20:57.16:0,57,1329	0/0:29,0:29:75.17:0,75,1810	0/0:23,0:23:63.17:0,63,1505	0/0:18,0:18:42.62:0,43,1050	0/0:16,0:16:36.05:0,36,729	0/0:15,0:15:42.13:0,42,995	0/0:28,0:28:75.26:0,75,1875	0/0:16,0:16:21.07:0,21,507	0/0:15,0:15:36.11:0,36,845	0/0:12,0:12:27.09:0,27,689	1/1:2,17:19:33.11:582,33,0	0/0:26,0:26:72.24:0,72,1709	0/0:20,0:20:48.15:0,48,1152	0/0:10,0:10:21:0,21,426
chr10	73846467	.	TTCCC	T	101.35	PASS	AB=0.916;AC=4;AF=0.071;AN=56;BaseQRankSum=7.509;DP=537;FS=1.901;HRun=0;HaplotypeScore=119.2313;InbreedingCoeff=-0.0858;MQ=56.35;MQ0=18;MQRankSum=-4.386;QD=1.22;ReadPosRankSum=-2.963;VQSLOD=1.7133;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:54.99:0,55,1680	0/0:3,0:3:9.03:0,9,243	0/0:36,0:13:25.92:0,26,383	0/1:40,0:14:4.91:5,0,449	0/0:16,0:16:38.92:0,39,1049	0/0:21,0:20:57.20:0,57,1390	0/0:17,0:17:45.15:0,45,1172	0/0:34,0:30:63.20:0,63,1340	0/0:19,0:18:51.17:0,51,1220	0/0:22,0:21:27.54:0,28,1312	0/0:11,0:11:24.08:0,24,576	0/0:15,0:14:33.07:0,33,732	0/1:19,2:21:63.56:64,0,1107	0/0:12,0:12:36.11:0,36,831	0/0:12,0:12:30.10:0,30,662	0/0:17,0:16:45.15:0,45,1109	0/0:19,0:19:1.89:0,2,1157	0/1:10,0:8:86.28:86,0,443	0/0:14,0:9:26.96:0,27,499	0/0:4,0:4:12.04:0,12,323	0/0:58,0:57:99:0,148,3795	0/0:19,1:20:20.85:0,21,880	0/1:8,4:11:49.87:50,0,322	0/0:18,0:17:25.32:0,25,402	0/0:20,0:20:11.29:0,11,1085	0/0:21,0:20:54.66:0,55,1376	0/0:8,0:7:21.07:0,21,520	0/0:7,0:7:21.07:0,21,543
chr10	73846496	.	TTCCC	T	3523	PASS	AB=0.801;AC=11;AF=0.196;AN=56;BaseQRankSum=10.317;DP=584;FS=2.263;HRun=0;HaplotypeScore=127.1019;InbreedingCoeff=-0.0849;MQ=46.35;MQ0=23;MQRankSum=-9.301;QD=17.70;ReadPosRankSum=-0.024;VQSLOD=3.6087;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:75.21:0,75,1782	0/0:7,0:7:21.07:0,21,528	0/0:32,0:7:11.19:0,11,277	0/1:38,0:7:13.18:13,0,186	0/0:20,0:19:51.17:0,51,1203	0/0:19,0:18:42.14:0,42,1000	0/0:19,0:19:51.17:0,51,1276	0/0:43,0:39:99:0,105,2583	0/0:23,0:22:60.21:0,60,1541	0/1:13,7:20:99:508,0,136	0/1:13,11:24:99:504,0,140	0/1:7,9:14:62.07:465,0,62	0/1:12,5:17:99:336,0,146	0/0:13,0:12:36.12:0,36,909	0/0:14,0:14:39.13:0,39,1013	0/0:13,0:12:33.11:0,33,847	0/1:20,0:20:4.10:4,0,1120	0/1:7,0:7:79.90:113,0,80	0/0:14,0:11:30.03:0,30,682	0/0:7,0:6:18.06:0,18,448	0/0:63,1:60:99:0,155,3789	0/1:12,9:21:99:489,0,226	0/1:9,2:10:99:154,0,143	0/0:3,9:12:4.26:0,4,84	1/1:6,16:22:2.77:937,3,0	0/0:22,0:20:57.20:0,57,1529	0/0:13,0:12:36.12:0,36,914	0/0:19,0:19:57.20:0,57,1372
chr10	73846497	.	TC	T	1339.67	PASS	AB=0.852;AC=10;AF=0.179;AN=56;BaseQRankSum=12.104;DP=588;FS=1.578;HRun=3;HaplotypeScore=109.7272;InbreedingCoeff=0.0338;MQ=46.40;MQ0=23;MQRankSum=-9.693;QD=7.48;ReadPosRankSum=0.475;VQSLOD=0.7379;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:27:72.24:0,72,1026	0/0:7,0:7:21.07:0,21,300	0/0:31,2:8:17.82:0,18,189	0/1:39,0:8:4.13:4,0,123	0/0:21,0:20:51.17:0,51,721	0/0:18,1:18:42.14:0,42,590	0/0:19,0:19:51.17:0,51,732	0/0:43,0:39:99:0,105,1483	0/0:25,0:24:63.18:0,63,866	0/1:13,6:19:41.60:279,0,42	0/1:16,8:24:58.67:212,0,59	0/1:16,0:14:8.96:168,0,9	0/1:15,3:17:51.59:153,0,52	0/0:13,0:12:36.12:0,36,515	0/0:15,0:15:39.13:0,39,561	0/0:12,0:11:33.11:0,33,471	0/0:19,1:20:12.73:0,13,624	0/1:5,4:7:28.93:68,0,29	0/0:14,0:12:33.08:0,33,436	0/0:7,0:6:18.06:0,18,257	0/0:60,4:60:99:0,152,2168	0/1:19,2:21:99:161,0,106	0/1:9,2:10:31.87:133,0,32	0/0:13,0:13:3.01:0,3,43	1/1:19,3:22:13.71:307,14,0	0/0:22,0:20:57.19:0,57,817	0/0:13,0:12:36.10:0,36,482	0/0:19,0:19:57.17:0,57,798
chr10	73846499	.	C	CT	172.40	PASS	AB=0.908;AC=8;AF=0.143;AN=56;BaseQRankSum=7.038;DP=595;FS=0.818;HRun=0;HaplotypeScore=117.2590;InbreedingCoeff=-0.1467;MQ=46.19;MQ0=25;MQRankSum=-4.870;QD=1.11;ReadPosRankSum=0.975;VQSLOD=2.3370;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:27:75.21:0,75,1015	0/0:7,0:7:21.07:0,21,294	0/0:39,0:10:20.66:0,21,226	0/1:39,0:8:0.75:1,0,98	0/0:22,0:20:54.16:0,54,729	0/0:19,0:18:42.14:0,42,582	0/0:19,0:19:51.17:0,51,713	0/0:43,0:39:99:0,105,1461	0/0:23,0:22:66.12:0,66,860	0/1:21,0:21:26.40:26,0,118	0/0:25,0:25:30.14:0,30,187	0/1:14,2:14:35.99:76,0,36	0/1:13,3:15:54.86:55,0,99	0/0:13,0:12:36.12:0,36,502	0/0:16,0:16:42.13:0,42,571	0/0:12,0:11:33.11:0,33,454	0/0:20,0:20:47.53:0,48,661	0/1:9,0:7:0.15:0,0,68	0/0:13,0:11:33.10:0,33,443	0/0:7,0:6:18.06:0,18,252	0/0:63,0:59:99:0,145,2108	0/1:17,3:20:26.93:27,0,201	0/1:6,5:10:64.24:99,0,64	0/0:13,0:13:5.98:0,6,62	0/1:23,0:23:8.78:9,0,90	0/0:23,0:21:56.93:0,57,796	0/0:13,0:12:36.10:0,36,482	0/0:19,0:19:57.19:0,57,794
chr10	73846500	.	C	CCTCT	944.52	PASS	AB=0.898;AC=7;AF=0.125;AN=56;BaseQRankSum=8.790;DP=614;FS=1.458;HRun=0;HaplotypeScore=149.7870;InbreedingCoeff=-0.1457;MQ=45.78;MQ0=27;MQRankSum=-7.726;QD=6.09;ReadPosRankSum=1.878;VQSLOD=2.1681;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:27:75.19:0,75,1429	0/0:7,0:7:21.07:0,21,436	0/0:40,0:10:21.77:0,22,275	0/1:42,0:9:9.96:10,0,175	0/0:23,0:20:54.15:0,54,1028	0/0:19,0:18:48.13:0,48,908	0/0:19,0:19:51.18:0,51,1043	0/0:44,0:39:99:0,108,2157	0/0:23,0:22:66.19:0,66,1293	0/1:22,0:22:91.90:92,0,336	0/0:27,0:27:17.34:0,17,315	0/1:12,2:14:57.58:303,0,58	0/1:12,2:15:99:203,0,155	0/0:13,0:12:36.12:0,36,725	0/0:16,0:16:45.12:0,45,859	0/0:13,0:12:36.11:0,36,715	0/0:20,0:20:50.45:0,50,966	0/0:9,0:7:7.79:0,8,120	0/0:14,0:12:36.12:0,36,699	0/0:7,0:6:18.06:0,18,368	0/0:64,0:60:99:0,158,3099	0/1:17,3:20:99:183,0,264	0/1:7,5:11:99:272,0,125	0/0:13,0:13:7.18:0,7,82	0/1:26,0:25:7.99:8,0,395	0/0:24,0:22:60.09:0,60,1222	0/0:13,0:12:36.12:0,36,736	0/0:20,0:20:57.19:0,57,1160
chr10	73846516	.	TC	T	955.68	PASS	AB=0.847;AC=7;AF=0.125;AN=56;BaseQRankSum=8.911;DP=617;FS=0.607;HRun=3;HaplotypeScore=126.4793;InbreedingCoeff=-0.1492;MQ=45.26;MQ0=29;MQRankSum=-9.224;QD=5.97;ReadPosRankSum=-2.937;VQSLOD=-0.5710;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:23:63.21:0,63,905	0/0:6,0:6:18.06:0,18,259	0/0:45,0:9:24.03:0,24,281	0/0:55,0:10:21.06:0,21,235	0/0:19,2:17:48.16:0,48,687	0/0:14,0:14:39.04:0,39,497	0/0:17,0:17:48.15:0,48,667	0/0:39,0:36:64.24:0,64,1234	0/0:25,0:24:72.23:0,72,1019	0/1:27,3:29:99:235,0,358	0/1:27,0:27:44.07:44,0,443	0/1:13,6:17:99:211,0,110	0/1:14,5:17:99:177,0,105	0/0:15,0:14:39.12:0,39,543	0/0:18,0:18:48.14:0,48,653	0/0:15,0:14:39.13:0,39,561	0/0:21,0:21:11.02:0,11,635	0/0:5,0:4:10.85:0,11,122	0/0:15,0:13:39.09:0,39,529	0/0:8,0:7:21.07:0,21,292	0/0:53,1:52:99:0,107,1946	0/1:11,8:19:99:256,0,112	0/1:11,5:15:91.17:91,0,136	0/0:5,2:7:10.27:0,10,118	0/1:30,0:29:71.75:72,0,536	0/0:22,0:20:60.20:0,60,864	0/0:15,0:15:45.15:0,45,646	0/0:14,0:14:42.09:0,42,558
chr10	73846517	.	C	CCT	1949.14	PASS	AB=0.776;AC=8;AF=0.143;AN=56;BaseQRankSum=8.498;DP=624;FS=2.803;HRun=0;HaplotypeScore=137.7344;InbreedingCoeff=-0.1696;MQ=45.16;MQ0=29;MQRankSum=-9.733;QD=11.53;ReadPosRankSum=-1.697;VQSLOD=3.4675;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:22:63.21:0,63,958	0/0:6,0:6:18.06:0,18,275	0/0:45,0:9:23.98:0,24,285	0/0:55,1:10:21.21:0,21,248	0/0:21,0:17:48.16:0,48,723	0/0:15,0:15:39.04:0,39,524	0/0:17,0:17:48.15:0,48,700	0/0:38,0:35:97.50:0,98,1343	0/0:27,0:26:72.23:0,72,1078	0/1:21,8:29:99:589,0,358	0/1:20,7:27:99:175,0,486	0/1:14,5:18:99:202,0,103	0/1:13,6:17:99:258,0,131	0/0:15,0:14:39.12:0,39,576	0/0:18,0:18:48.16:0,48,703	0/0:16,0:14:39.13:0,39,593	0/0:20,0:20:46.19:0,46,708	0/1:5,1:5:73.02:73,0,73	0/0:15,0:13:39.13:0,39,567	0/0:9,0:8:21.07:0,21,309	0/0:52,0:50:99:0,138,2056	0/1:13,6:19:99:263,0,134	0/1:12,6:17:99:308,0,136	0/0:9,0:8:10.27:0,10,124	0/1:20,10:29:99:217,0,511	0/0:22,0:20:60.20:0,60,914	0/0:15,0:15:45.15:0,45,680	0/0:14,0:14:42.11:0,42,587
chr10	73846530	.	CTTT	C	2661.83	PASS	AB=0.691;AC=10;AF=0.179;AN=56;BaseQRankSum=10.884;DP=588;FS=8.591;HRun=3;HaplotypeScore=126.5183;InbreedingCoeff=0.0022;MQ=44.37;MQ0=34;MQRankSum=-9.784;QD=16.04;ReadPosRankSum=-1.679;VQSLOD=-0.5180;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:69.23:0,69,1593	0/0:7,0:7:21.07:0,21,491	0/0:55,1:8:20.37:0,20,317	0/0:60,1:7:17.87:0,18,204	0/0:17,0:14:39.13:0,39,958	0/0:13,0:12:33.11:0,33,803	0/0:16,0:16:45.09:0,45,1015	0/0:24,0:19:48.09:0,48,1019	0/0:26,0:24:72.25:0,72,1773	0/1:18,9:26:99:418,0,674	0/1:13,15:28:99:645,0,183	0/1:9,5:15:99:212,0,283	0/1:11,6:16:99:180,0,429	0/0:16,0:15:45.11:0,45,1004	0/0:17,0:17:42.14:0,42,1013	0/0:15,0:14:42.14:0,42,987	0/0:21,0:21:49.96:0,50,1389	0/1:2,4:5:58.82:157,0,59	0/0:12,0:11:33.08:0,33,638	0/0:9,0:9:27.08:0,27,619	0/0:39,0:37:99:0,99,2385	0/1:10,3:14:99:179,0,347	0/1:10,8:17:99:216,0,162	1/1:2,4:6:9.02:123,9,0	0/1:16,14:29:99:679,0,267	0/0:20,0:20:60.07:0,60,1419	0/0:15,0:15:45.14:0,45,1045	0/0:11,0:11:30.10:0,30,709
chr10	73846561	.	C	CTCT	1638.09	PASS	AB=0.872;AC=9;AF=0.161;AN=56;BaseQRankSum=9.130;DP=560;FS=13.474;HRun=0;HaplotypeScore=129.8649;InbreedingCoeff=-0.2016;MQ=38.22;MQ0=47;MQRankSum=-8.436;QD=8.58;ReadPosRankSum=-1.332;VQSLOD=2.2600;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:23:37.05:0,37,835	0/0:4,0:4:12.04:0,12,199	0/0:31,0:3:6.91:0,7,82	0/0:37,0:1:2.97:0,3,20	0/0:17,0:14:23.64:0,24,316	0/0:15,0:12:23.90:0,24,309	0/0:18,0:16:31.62:0,32,457	0/0:24,0:9:23.54:0,24,294	0/0:21,0:17:51.16:0,51,818	0/1:20,6:22:94.77:414,0,95	0/1:23,6:29:52.62:328,0,53	0/1:21,2:20:88.29:88,0,230	0/1:19,4:20:99:149,0,262	0/0:17,0:17:42.59:0,43,655	0/0:15,0:14:36.05:0,36,576	0/0:17,0:15:42.05:0,42,618	0/0:17,0:17:48.58:0,49,778	0/1:7,0:3:8.64:9,0,53	0/0:11,0:7:17.39:0,17,228	0/0:9,0:7:18.05:0,18,281	0/0:34,0:28:71.06:0,71,1027	0/1:24,0:23:49.96:50,0,345	0/1:19,2:19:99:187,0,142	0/1:7,2:8:24.92:58,0,25	0/1:17,12:28:27.20:493,0,27	0/0:24,0:18:51.07:0,51,733	0/0:18,0:17:27.87:0,28,576	0/0:13,0:12:27:0,27,425
chr10	73846582	.	TTCC	T	346.65	PASS	AB=0.956;AC=9;AF=0.167;AN=54;BaseQRankSum=7.556;DP=436;FS=28.339;HRun=0;HaplotypeScore=102.9100;InbreedingCoeff=0.0376;MQ=35.42;MQ0=35;MQRankSum=-6.489;QD=2.34;ReadPosRankSum=0.144;VQSLOD=0.3181;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:29.56:0,30,586	0/0:1,0:1:3.01:0,3,64	0/0:24,0:2:5.98:0,6,84	./.	0/0:11,0:9:11.11:0,11,198	0/0:12,0:10:18.06:0,18,374	0/0:18,0:17:30.09:0,30,584	0/0:24,0:9:20.38:0,20,426	0/0:10,0:9:23.10:0,23,390	0/1:19,0:16:5.77:6,0,263	0/1:17,0:17:50.34:50,0,53	0/1:16,2:15:57.04:68,0,57	0/1:19,3:19:99:106,0,129	0/0:15,0:15:33:0,33,618	0/0:12,0:11:24:0,24,468	0/0:15,0:13:30.10:0,30,643	0/0:16,0:16:15.20:0,15,688	0/0:7,0:4:1.86:0,2,23	0/0:15,0:11:26.12:0,26,483	0/0:7,0:5:15.05:0,15,322	0/0:22,0:16:31.55:0,32,623	0/1:18,2:20:85.82:86,0,120	1/1:17,2:16:18.94:116,19,0	0/1:13,0:11:0.84:1,0,90	0/1:20,0:18:37.70:48,0,38	0/0:16,0:12:27.04:0,27,519	0/0:14,0:13:32.80:0,33,518	0/0:6,0:7:9.30:0,9,138
chr10	73846784	.	CTTGTTG	C	598.70	PASS	AB=1.000;AC=26;AF=0.565;AN=46;BaseQRankSum=-0.632;DP=128;FS=1.346;HRun=0;HaplotypeScore=41.2646;InbreedingCoeff=0.2712;MQ=45.57;MQ0=12;MQRankSum=-1.661;QD=9.50;ReadPosRankSum=2.857;VQSLOD=1.4868;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:8.96:79,9,0	0/0:3,0:3:4.15:0,4,14	0/0:20,0:3:5.54:0,6,27	0/0:16,0:4:7.27:0,7,79	0/0:7,0:7:2.81:0,3,7	0/1:5,0:5:2.32:29,0,2	./.	1/1:2,0:1:3.01:40,3,0	./.	1/1:5,0:5:6.02:74,6,0	1/1:1,0:2:3.41:19,3,0	0/1:3,0:3:23.03:27,0,23	1/1:4,0:5:9.02:98,9,0	0/0:1,0:1:1.55:0,2,4	./.	./.	1/1:6,0:3:5.98:60,6,0	./.	0/0:1,0:1:0.89:0,1,2	0/0:6,0:6:5.62:0,6,15	0/0:3,0:1:0.89:0,1,2	0/1:4,0:4:26.93:27,0,37	1/1:1,0:2:6.02:72,6,0	1/1:6,0:6:12.44:119,12,0	1/1:1,0:1:2.37:8,2,0	1/1:5,0:5:2.51:39,3,0	0/1:8,0:6:1.15:26,0,1	1/1:3,0:3:0.50:13,0,0
chr10	73847162	.	C	CTA	10707.38	PASS	AB=0.943;AC=21;AF=0.375;AN=56;BaseQRankSum=4.953;DP=615;FS=2.273;HRun=0;HaplotypeScore=74.8413;InbreedingCoeff=0.9221;MQ=81.36;MQ0=0;MQRankSum=-1.663;QD=43.88;ReadPosRankSum=3.726;VQSLOD=6.3893;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:69.24:1324,69,0	0/0:6,0:6:18.03:0,18,233	0/0:22,0:22:58.17:0,58,808	0/0:22,0:22:56.98:0,57,794	0/0:33,0:33:96.26:0,96,1371	0/0:31,0:31:93.30:0,93,1399	0/0:17,0:17:51.17:0,51,780	0/0:30,0:29:90.27:0,90,1304	0/0:21,0:21:63.18:0,63,919	1/1:1,25:26:78.26:1481,78,0	1/1:1,25:26:69.23:1296,69,0	1/1:0,18:18:48.16:926,48,0	1/1:1,28:29:72.25:1384,72,0	0/0:26,0:26:78.24:0,78,1150	0/0:18,0:18:54.18:0,54,826	0/0:25,0:25:72.20:0,72,1039	0/0:16,0:16:48.14:0,48,710	1/1:1,8:10:18.06:347,18,0	0/0:23,0:23:69.20:0,69,979	0/0:19,0:19:57.19:0,57,871	0/0:11,0:11:27.05:0,27,350	1/1:0,12:12:36.12:693,36,0	1/1:0,16:16:45.15:866,45,0	1/1:1,20:22:57.20:1097,57,0	1/1:0,23:23:66.23:1273,66,0	0/1:31,2:33:19.62:20,0,1236	0/0:37,0:37:99:0,111,1632	0/0:13,0:13:33.11:0,33,505
chr10	73848469	.	GA	G	7426.92	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.349;DP=701;FS=8.845;HRun=4;HaplotypeScore=68.0368;InbreedingCoeff=0.9983;MQ=89.93;MQ0=0;MQRankSum=-7.314;QD=31.34;ReadPosRankSum=3.259;VQSLOD=5.2413;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:81.25:972,81,0	0/0:6,0:6:18.06:0,18,245	0/0:31,0:31:81.26:0,81,1098	0/0:24,0:24:63.16:0,63,815	0/0:45,0:45:99:0,132,1796	0/0:26,0:26:72.24:0,72,1008	0/0:8,0:8:24.08:0,24,336	0/0:34,0:34:99:0,102,1413	0/0:22,0:22:60.20:0,60,840	1/1:1,30:31:84.23:985,84,0	1/1:1,16:17:45.14:540,45,0	1/1:1,29:30:81.25:972,81,0	1/1:0,28:28:75.23:900,75,0	0/0:26,0:26:72.24:0,72,1007	0/0:28,0:28:81.27:0,81,1134	0/0:29,0:29:87.28:0,87,1204	0/0:19,0:18:57.19:0,57,797	0/0:13,0:13:36.12:0,36,503	0/0:21,0:21:60.17:0,60,805	0/0:30,0:30:87.29:0,87,1218	0/0:27,0:27:81.27:0,81,1132	1/1:1,20:21:51.16:611,51,0	1/1:0,32:32:90.28:1079,90,0	1/1:0,17:17:48.15:576,48,0	1/1:1,27:28:66.20:792,66,0	0/0:35,2:37:39.34:0,39,1398	0/0:27,0:27:81.25:0,81,1101	0/0:11,0:11:33.11:0,33,462
chr10	73848985	.	CTG	C	1859.10	PASS	AB=0.727;AC=9;AF=0.161;AN=56;BaseQRankSum=10.057;DP=757;FS=0.506;HRun=0;HaplotypeScore=155.2177;InbreedingCoeff=0.8496;MQ=70.65;MQ0=0;MQRankSum=-4.874;QD=19.78;ReadPosRankSum=0.294;VQSLOD=3.5640;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:33.11:462,33,0	0/0:13,0:13:39.13:0,39,676	0/0:25,0:25:54.45:0,54,821	0/0:38,0:36:33.52:0,34,1063	0/0:15,0:15:45.14:0,45,783	0/0:18,0:18:39.11:0,39,677	0/0:41,0:41:99:0,108,1908	0/0:44,0:44:99:0,132,2300	0/0:21,0:21:54.14:0,54,939	1/1:0,15:15:42.05:464,42,0	1/1:0,5:5:9.03:134,9,0	0/0:36,0:36:83.63:0,84,1335	0/0:34,0:34:84.29:0,84,1414	0/0:28,0:28:72.25:0,72,1371	0/0:44,0:44:99:0,117,2115	0/0:34,0:34:90.23:0,90,1654	0/0:25,0:25:63.20:0,63,1149	0/1:20,12:32:99:246,0,896	0/0:23,0:23:69.20:0,69,1185	0/0:25,0:25:69.23:0,69,1291	0/0:80,0:80:99:0,223,4002	0/0:10,0:10:24.03:0,24,407	0/0:16,0:16:39.13:0,39,611	0/0:35,0:35:93.24:0,93,1499	1/1:1,18:19:48.16:714,48,0	0/0:23,1:24:20.28:0,20,1109	0/0:19,0:19:50.87:0,51,971	0/0:14,0:14:42.14:0,42,796
chr10	73848994	.	T	TCC	4650.30	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=9.652;DP=776;FS=12.202;HRun=7;HaplotypeScore=145.7040;InbreedingCoeff=0.8812;MQ=65.93;MQ0=4;MQRankSum=-2.497;QD=20.40;ReadPosRankSum=2.328;VQSLOD=2.1940;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:24.92:114,25,0	0/0:14,0:14:33.09:0,33,377	0/0:21,0:23:48.65:0,49,463	0/0:34,0:33:46.99:0,47,582	0/0:17,0:17:41.90:0,42,444	0/0:22,0:22:32.98:0,33,356	0/0:40,0:40:84.04:0,84,906	0/0:41,0:41:99:0,99,1120	0/0:21,0:21:48.13:0,48,558	1/1:12,0:12:30.72:177,31,0	1/1:6,0:5:4.74:16,5,0	1/1:7,31:38:74.71:1112,75,0	1/1:3,32:34:83.03:1355,83,0	0/0:31,0:31:71.36:0,71,784	0/0:45,0:45:93.22:0,93,1069	0/0:36,0:36:93.12:0,93,1025	0/0:25,0:25:57.11:0,57,627	0/1:30,0:30:41.51:42,0,331	0/0:23,0:23:57.10:0,57,638	0/0:29,0:29:72.11:0,72,787	0/0:81,0:80:99:0,195,2218	1/1:0,12:12:27.05:405,27,0	1/1:7,10:17:18.06:295,18,0	1/1:10,26:36:5.96:1005,6,0	1/1:21,0:20:36.95:130,37,0	0/0:27,0:27:47.25:0,47,652	0/0:20,0:20:47.81:0,48,541	0/0:14,0:14:39.11:0,39,454
chr10	73849070	.	GTGCACCAC	G	1274.82	PASS	AB=0.813;AC=3;AF=0.068;AN=44;BaseQRankSum=4.988;DP=616;FS=16.736;HRun=0;HaplotypeScore=84.2093;InbreedingCoeff=-0.1369;MQ=28.98;MQ0=227;MQRankSum=-3.914;QD=16.56;ReadPosRankSum=1.312;VQSLOD=0.8040;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:5,0:2:3.01:0,3,132	./.	./.	./.	0/0:18,0:13:12.04:0,12,329	0/0:39,0:8:3.01:0,3,88	0/0:15,0:2:6.02:0,6,191	0/0:22,0:16:6.88:0,7,269	0/1:18,11:14:99:900,0,138	./.	0/0:47,0:27:20.09:0,20,633	0/0:28,0:8:3.01:0,3,100	0/0:27,0:19:15:0,15,575	0/0:38,0:26:27.09:0,27,999	0/0:31,0:24:20.65:0,21,852	0/0:28,0:11:6.02:0,6,268	0/0:9,0:4:9.03:0,9,195	0/0:16,0:5:12.04:0,12,496	0/0:14,0:13:21.06:0,21,582	0/0:67,0:31:31.97:0,32,1034	0/0:10,0:1:3.01:0,3,52	./.	0/0:32,0:17:14.96:0,15,612	0/1:14,7:11:21.17:405,0,21	0/1:26,1:8:64.92:65,0,658	0/0:18,0:12:8.71:0,9,198	0/0:18,0:14:12.04:0,12,447
chr10	73849872	.	CCT	C	2638.40	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.267;DP=835;FS=8.113;HRun=0;HaplotypeScore=113.5610;InbreedingCoeff=0.9998;MQ=81.77;MQ0=12;MQRankSum=-2.909;QD=31.79;ReadPosRankSum=5.195;VQSLOD=5.6416;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:99:0,108,1993	0/0:11,0:10:30.10:0,30,578	0/0:38,0:36:98.28:0,98,1550	0/0:36,0:32:43.75:0,44,1159	0/0:33,0:33:90.29:0,90,1662	0/0:39,0:36:96.33:0,96,1797	0/0:31,0:31:93.31:0,93,1735	0/0:17,0:17:48.15:0,48,850	0/0:32,0:32:87.30:0,87,1669	1/1:1,25:25:74.82:1084,75,0	1/1:0,18:18:42.14:642,42,0	0/0:39,0:39:99:0,108,1995	0/0:31,0:29:78.27:0,78,1477	0/0:32,0:31:78.26:0,78,1485	0/0:27,0:26:69.24:0,69,1282	0/0:34,0:32:90.31:0,90,1716	0/0:31,0:31:84.29:0,84,1586	0/0:26,0:26:78.24:0,78,1439	0/0:24,0:23:69.18:0,69,1205	0/0:38,0:37:96.30:0,96,1746	0/0:39,0:39:99:0,108,2012	0/0:30,0:29:81.22:0,81,1472	0/0:26,0:25:75.26:0,75,1427	0/0:38,0:38:87.27:0,87,1606	1/1:3,36:36:69.23:1055,69,0	0/0:26,0:26:78.26:0,78,1436	0/0:23,0:22:66.13:0,66,1144	0/0:13,0:12:36.12:0,36,695
chr10	73854738	.	CT	C	226.80	PASS	AB=0.841;AC=8;AF=0.148;AN=54;BaseQRankSum=-0.046;DP=507;FS=3.157;HRun=15;HaplotypeScore=98.9176;InbreedingCoeff=0.3355;MQ=73.45;MQ0=5;MQRankSum=0.539;QD=2.47;ReadPosRankSum=2.716;VQSLOD=0.2126;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:17:36.97:0,37,187	0/0:6,0:6:11.99:0,12,103	0/0:40,0:20:10.44:0,10,180	0/0:38,0:17:13.59:0,14,85	0/1:18,2:23:9.70:10,0,245	0/0:16,0:16:20.99:0,21,182	0/0:14,1:16:9.45:0,9,173	0/0:30,1:34:31.61:0,32,342	0/0:17,0:18:0.80:0,1,98	0/0:14,0:15:16.98:0,17,98	0/0:16,0:19:36.26:0,36,221	0/1:8,1:9:11.11:24,0,11	1/1:5,1:7:10.72:58,11,0	0/0:13,0:13:11.37:0,11,87	0/0:14,0:15:14.14:0,14,150	0/0:18,0:17:11.96:0,12,98	0/0:22,1:23:4.67:0,5,153	0/0:11,0:11:25.43:0,25,145	0/0:14,1:15:7.64:0,8,175	0/0:26,1:27:26.84:0,27,311	0/0:11,0:12:23.46:0,23,184	0/1:5,4:9:8.14:62,0,8	1/1:11,7:20:30.42:182,30,0	./.	0/0:16,0:22:43.30:0,43,263	0/1:19,3:24:31.47:31,0,209	0/0:17,0:19:22.41:0,22,181	0/0:14,1:16:13.52:0,14,219
chr10	73854764	.	GT	G	690.84	PASS	AB=0.712;AC=9;AF=0.161;AN=56;BaseQRankSum=0.428;DP=568;FS=29.646;HRun=14;HaplotypeScore=87.4672;InbreedingCoeff=0.5332;MQ=58.26;MQ0=14;MQRankSum=3.298;QD=5.66;ReadPosRankSum=2.678;VQSLOD=0.4187;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:18:33.85:0,34,184	0/0:4,0:6:15.61:0,16,115	0/1:49,2:16:31.20:31,0,45	0/0:46,0:16:11.68:0,12,86	0/0:25,0:28:9.34:0,9,245	0/0:8,0:10:18.05:0,18,117	0/0:19,0:18:35.96:0,36,316	0/0:29,1:33:36.68:0,37,395	0/0:11,0:12:22.41:0,22,181	0/0:7,0:13:21.03:0,21,153	0/0:12,0:18:32.05:0,32,188	1/1:5,7:13:22.07:136,22,0	1/1:2,11:13:19.95:210,20,0	0/0:10,0:12:20.86:0,21,181	0/0:19,1:20:28.33:0,28,358	0/0:20,1:24:27.30:0,27,380	0/0:18,2:20:0.74:0,1,272	0/0:6,0:13:28.74:0,29,156	0/0:18,0:23:14.02:0,14,332	0/0:25,1:28:21.85:0,22,449	0/0:11,0:11:24.75:0,25,185	0/1:1,7:9:14.63:53,0,15	1/1:14,13:26:55.89:367,56,0	0/1:4,5:9:15.93:50,0,16	0/0:13,0:19:31.46:0,31,176	0/0:26,1:28:20.13:0,20,393	0/0:19,1:20:21.33:0,21,312	0/0:15,1:16:10.53:0,11,251
chr10	73854827	.	CG	C	3038.34	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.448;DP=511;FS=18.944;HRun=3;HaplotypeScore=54.0971;InbreedingCoeff=0.9976;MQ=65.13;MQ0=3;MQRankSum=-1.873;QD=31.00;ReadPosRankSum=1.908;VQSLOD=1.8391;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:48.15:593,48,0	0/0:10,0:10:30.09:0,30,412	0/0:18,0:13:32.98:0,33,419	0/0:17,0:13:39.12:0,39,516	0/0:29,0:29:87.26:0,87,1209	0/0:17,0:17:51.17:0,51,733	0/0:18,0:18:54.18:0,54,773	0/0:31,0:31:81.20:0,81,1087	0/0:14,0:14:42.10:0,42,578	1/1:1,30:31:90.24:1088,90,0	1/1:3,14:17:45.03:512,45,0	0/0:13,0:13:36.10:0,36,497	0/0:17,0:17:48.13:0,48,637	0/0:13,0:13:39.03:0,39,493	0/0:20,0:20:54.16:0,54,756	0/0:32,0:32:84.27:0,84,1188	0/0:17,0:17:45.11:0,45,602	1/1:0,15:15:39.12:482,39,0	0/0:16,0:16:42.08:0,42,559	0/0:25,0:25:75.11:0,75,984	0/0:14,0:14:42.10:0,42,580	0/0:11,0:11:27.09:0,27,387	0/0:20,0:20:57.19:0,57,818	0/0:18,0:18:48.12:0,48,663	1/1:1,17:18:45.10:540,45,0	0/0:20,0:20:60.19:0,60,844	0/0:17,0:16:48.15:0,48,672	0/0:6,0:6:18.06:0,18,255
chr10	73857356	.	T	TTGTGTGTG	2172.21	PASS	AB=0.989;AC=19;AF=0.365;AN=52;BaseQRankSum=1.266;DP=636;FS=1.577;HRun=0;HaplotypeScore=183.7305;InbreedingCoeff=0.6073;MQ=66.51;MQ0=8;MQRankSum=-3.429;QD=7.93;ReadPosRankSum=-3.203;VQSLOD=2.3041;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:9.92:220,10,0	0/0:9,0:10:14.92:0,15,264	./.	./.	0/1:29,0:30:2.84:3,0,387	0/0:17,0:19:21.07:0,21,443	0/0:29,0:31:28.28:0,28,536	1/1:17,0:17:1.82:5,2,0	0/0:9,0:10:13.96:0,14,254	0/0:19,0:19:6.13:0,6,218	0/0:19,0:22:26.09:0,26,415	1/1:14,8:24:9.03:245,9,0	1/1:15,0:16:15.51:414,16,0	0/0:22,0:22:9.50:0,10,187	0/0:27,0:27:26.27:0,26,569	0/0:18,0:21:27.04:0,27,585	0/1:27,0:32:65.40:65,0,645	1/1:18,0:18:21.07:639,21,0	0/1:22,0:21:32.77:33,0,173	0/0:24,0:24:39.08:0,39,762	0/0:40,0:40:7.45:0,7,382	1/1:19,0:19:15.05:425,15,0	1/1:16,2:27:9.03:277,9,0	1/1:16,13:31:2.88:24,3,0	0/0:14,0:15:27.56:0,28,580	0/0:18,0:18:10.42:0,10,240	0/0:19,0:19:8.89:0,9,199	0/0:8,0:8:5.88:0,6,149
chr10	73857396	.	G	GTTA	72.60	PASS	AB=0.855;AC=2;AF=0.036;AN=56;BaseQRankSum=5.761;DP=639;FS=0.000;HRun=0;HaplotypeScore=131.0839;InbreedingCoeff=-0.0464;MQ=63.01;MQ0=13;MQRankSum=-3.537;QD=1.48;ReadPosRankSum=-1.983;VQSLOD=1.9418;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,15:34:63.85:146,0,64	0/1:10,0:10:8.16:8,0,303	0/0:35,0:22:53.63:0,54,883	0/0:44,0:24:68.94:0,69,1027	0/0:27,0:26:60.08:0,60,905	0/0:25,0:25:50.85:0,51,818	0/0:34,0:34:74.78:0,75,1192	0/0:20,0:20:47.29:0,47,697	0/0:12,0:12:27.03:0,27,389	0/0:20,0:20:34.36:0,34,557	0/0:22,0:22:17.95:0,18,701	0/0:17,0:17:11.73:0,12,322	0/0:21,0:21:31.26:0,31,511	0/0:18,0:18:51.17:0,51,859	0/0:24,0:24:47.61:0,48,746	0/0:23,0:23:51.80:0,52,931	0/0:25,0:25:47.10:0,47,805	0/0:12,0:12:29.73:0,30,324	0/0:21,0:21:6.33:0,6,479	0/0:22,0:22:63.21:0,63,1060	0/0:43,0:42:72.85:0,73,1305	0/0:15,0:15:23.87:0,24,328	0/0:19,0:19:10.50:0,10,251	0/0:38,0:38:35.91:0,36,584	0/0:18,0:18:42.35:0,42,699	0/0:14,0:14:4.86:0,5,494	0/0:14,0:14:27.56:0,28,458	0/0:7,0:7:21.07:0,21,343
chr10	73859087	.	A	AAC	4537.45	PASS	AB=0.939;AC=9;AF=0.161;AN=56;BaseQRankSum=-12.857;DP=745;FS=17.087;HRun=0;HaplotypeScore=90.7410;InbreedingCoeff=0.8682;MQ=75.02;MQ0=2;MQRankSum=-2.480;QD=31.95;ReadPosRankSum=0.082;VQSLOD=5.6438;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.23:0,81,993	0/0:9,0:9:24.08:0,24,303	0/0:20,0:20:45.58:0,46,520	0/0:24,0:22:39.04:0,39,450	0/0:30,0:30:84.25:0,84,1036	0/0:18,0:18:51.12:0,51,593	0/0:24,0:24:69.21:0,69,857	0/0:41,0:41:87.24:0,87,1054	0/0:25,0:25:66.20:0,66,820	1/1:2,35:39:99:1817,114,0	1/1:3,19:22:48.16:798,48,0	0/0:28,0:28:81.25:0,81,1010	0/0:23,0:23:57.18:0,57,719	0/0:28,0:28:78.25:0,78,984	0/0:28,0:28:84.23:0,84,1014	0/0:33,0:33:84.26:0,84,1047	0/0:17,0:17:39.12:0,39,492	1/1:5,17:22:50.78:845,51,0	0/0:30,0:30:72.17:0,72,855	0/0:29,0:29:81.26:0,81,1022	0/0:42,0:42:99:0,114,1383	0/0:33,0:33:90.24:0,90,1074	0/0:21,0:21:60.19:0,60,757	0/0:28,0:28:78.22:0,78,967	1/1:4,24:25:31.37:1059,31,0	0/1:29,2:31:18.54:19,0,854	0/0:31,0:30:90.27:0,90,1120	0/0:10,0:10:24.06:0,24,288
chr10	73859757	.	G	GC	1161.40	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.091;DP=540;FS=4.606;HRun=3;HaplotypeScore=61.9170;InbreedingCoeff=0.9590;MQ=95.24;MQ0=0;MQRankSum=-4.874;QD=34.16;ReadPosRankSum=0.547;VQSLOD=4.1564;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:90.30:1256,90,0	0/0:8,0:8:17.89:0,18,194	0/0:22,0:23:56.37:0,56,637	0/0:29,0:29:74.11:0,74,835	0/0:27,0:27:78.23:0,78,921	0/0:16,0:16:48.15:0,48,576	0/0:17,0:17:51.14:0,51,597	0/0:20,0:20:36.10:0,36,423	0/0:17,0:17:48.15:0,48,576	0/0:9,0:9:27.08:0,27,324	0/0:16,0:16:45.12:0,45,516	0/0:24,0:24:72.21:0,72,849	0/0:18,0:18:54.15:0,54,635	0/0:22,0:22:66.18:0,66,771	0/0:18,0:18:54.09:0,54,618	0/0:10,0:10:24.06:0,24,277	0/0:34,0:34:96.29:0,96,1152	0/0:19,0:19:57.16:0,57,671	0/0:21,0:21:63.17:0,63,741	0/0:12,0:12:30.09:0,30,360	0/0:22,0:22:66.17:0,66,766	0/0:16,0:16:45.10:0,45,524	0/0:15,0:15:42.13:0,42,504	0/0:24,0:24:72.20:0,72,851	0/0:26,0:26:66.19:0,66,781	0/0:22,0:22:66.16:0,66,757	0/0:16,0:16:45.14:0,45,539	0/0:5,0:5:12.04:0,12,144
chr10	73861148	.	G	GT	2602.23	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-6.945;DP=711;FS=9.655;HRun=7;HaplotypeScore=73.8030;InbreedingCoeff=0.9988;MQ=82.56;MQ0=0;MQRankSum=-0.928;QD=28.91;ReadPosRankSum=-0.802;VQSLOD=3.5888;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:99:0,117,1128	0/0:8,0:8:21.03:0,21,202	0/0:23,0:23:51.01:0,51,466	0/0:25,0:26:50.98:0,51,463	0/0:36,0:36:96.14:0,96,925	0/0:25,0:25:72.11:0,72,694	0/0:23,0:23:63.09:0,63,602	0/0:29,0:29:63.07:0,63,602	0/0:19,0:19:51.08:0,51,492	1/1:7,20:27:57.16:677,57,0	1/1:3,19:22:54.16:639,54,0	0/0:28,0:28:74.97:0,75,699	0/0:20,0:20:54.08:0,54,521	0/0:39,0:39:99:0,108,1013	0/0:30,0:30:87.14:0,87,839	0/0:31,0:31:78.12:0,78,753	0/0:20,0:20:48.05:0,48,456	1/1:0,11:11:33.10:399,33,0	0/0:23,0:23:60.09:0,60,579	0/0:25,0:25:66.10:0,66,635	0/0:30,0:30:84.13:0,84,807	0/0:27,0:27:72.11:0,72,694	0/0:26,0:26:68.97:0,69,650	0/0:19,0:19:45.06:0,45,430	1/1:1,29:30:87.27:1048,87,0	0/0:28,0:28:74.59:0,75,698	0/0:20,0:19:54.08:0,54,520	0/0:23,0:23:63.10:0,63,608
chr10	73863874	.	TACAC	T	342.37	PASS	AB=0.900;AC=20;AF=0.667;AN=30;BaseQRankSum=0.241;DP=515;FS=5.639;HRun=0;HaplotypeScore=87.1037;InbreedingCoeff=0.2461;MQ=75.61;MQ0=18;MQRankSum=-0.022;QD=1.79;ReadPosRankSum=0.241;VQSLOD=0.7391;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/1:15,5:19:17.45:39,0,17	1/1:10,0:9:2.99:23,3,0	1/1:19,0:19:2.78:23,3,0	./.	./.	0/0:9,0:9:5.98:0,6,50	./.	./.	1/1:17,0:19:2.80:25,3,0	0/1:19,0:18:14.95:40,0,15	1/1:15,4:18:3.01:45,3,0	1/1:7,5:12:3.01:45,3,0	1/1:24,1:24:5.35:68,5,0	0/0:15,0:15:15.94:0,16,284	./.	./.	1/1:26,0:25:11.95:94,12,0	./.	1/1:9,0:12:1.82:5,2,0	./.	0/0:21,0:21:6.01:0,6,87	0/0:20,0:19:0:0,0,0	1/1:8,1:9:3:45,3,0	./.
chr10	73864385	.	CT	C	433.51	PASS	AB=0.900;AC=5;AF=0.089;AN=56;BaseQRankSum=8.189;DP=666;FS=4.728;HRun=10;HaplotypeScore=66.0661;InbreedingCoeff=0.3316;MQ=76.95;MQ0=0;MQRankSum=-3.769;QD=5.49;ReadPosRankSum=-0.169;VQSLOD=1.1730;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:56.51:494,57,0	0/0:7,0:7:18.02:0,18,183	0/1:15,2:17:27.63:28,0,282	0/1:17,2:17:25.70:26,0,203	0/0:23,0:25:65.93:0,66,678	0/0:30,0:30:72.23:0,72,847	0/0:15,0:15:13.26:0,13,340	0/0:29,1:32:72:0,72,755	0/0:24,0:24:66.12:0,66,707	0/0:26,0:26:66.18:0,66,727	0/0:28,0:29:75.01:0,75,793	0/0:32,2:35:26.83:0,27,718	0/0:29,0:29:78.21:0,78,862	0/0:27,0:27:69.19:0,69,763	0/0:25,1:26:40.09:0,40,653	0/0:35,1:36:73.19:0,73,1022	0/0:14,1:15:16.04:0,16,397	0/0:18,0:18:48.09:0,48,518	0/0:21,2:23:2.07:0,2,464	0/0:27,0:27:69.19:0,69,763	0/0:19,0:19:42.09:0,42,449	0/0:13,0:13:33.08:0,33,358	0/0:25,1:28:51.82:0,52,764	0/0:20,1:21:57.15:0,57,631	0/1:16,2:18:0.98:1,0,438	0/0:40,2:42:50.16:0,50,1010	0/0:30,3:33:12.06:0,12,802	0/0:7,0:7:18.05:0,18,199
chr10	73864636	.	GACTTGGAAGC	G	2048.19	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.607;DP=768;FS=7.089;HRun=0;HaplotypeScore=237.0491;InbreedingCoeff=0.9694;MQ=87.86;MQ0=0;MQRankSum=-7.939;QD=55.36;ReadPosRankSum=-0.778;VQSLOD=1.9164;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,29:37:66.23:2143,66,0	0/0:9,0:9:27.09:0,27,1352	0/0:22,0:23:67.11:0,67,3134	0/0:32,0:32:96.33:0,96,4335	0/0:23,0:23:69.24:0,69,3529	0/0:16,0:16:48.16:0,48,2275	0/0:37,0:37:99:0,111,5366	0/0:33,0:33:96.33:0,96,5134	0/0:26,0:26:75.26:0,75,3959	0/0:27,0:27:81.28:0,81,4359	0/0:16,0:16:48.16:0,48,2579	0/0:41,0:41:99:0,123,6122	0/0:25,0:25:75.26:0,75,3910	0/0:35,0:35:99:0,105,5580	0/0:50,0:50:99:0,151,7782	0/0:33,0:33:99:0,99,5103	0/0:33,0:33:99:0,99,5052	0/0:17,0:17:48.16:0,48,2435	0/0:21,0:21:60.20:0,60,2949	0/0:19,0:19:57.20:0,57,3046	0/0:48,0:48:99:0,141,7265	0/0:25,0:25:75.26:0,75,3767	0/0:22,0:22:60.21:0,60,3161	0/0:27,0:27:81.28:0,81,4219	0/0:23,0:23:69.24:0,69,3644	0/0:31,0:31:93.32:0,93,4911	0/0:35,0:34:99:0,105,5359	0/0:4,0:4:12.04:0,12,648
chr10	73866293	.	AT	A	921.91	PASS	AB=0.836;AC=20;AF=0.357;AN=56;BaseQRankSum=7.940;DP=670;FS=2.299;HRun=16;HaplotypeScore=91.8293;InbreedingCoeff=0.4845;MQ=72.07;MQ0=0;MQRankSum=0.585;QD=2.72;ReadPosRankSum=5.198;VQSLOD=-0.0017;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,22:34:17.55:304,18,0	1/1:1,2:3:5.87:36,6,0	0/0:18,0:15:8.41:0,8,59	0/0:18,0:15:9.05:0,9,58	0/1:27,2:29:9.23:9,0,239	1/1:8,12:23:15.94:175,16,0	0/1:6,11:20:11.66:126,0,12	0/0:17,2:19:10.44:0,10,165	0/0:24,0:25:15.21:0,15,207	1/1:13,2:38:50.42:164,50,0	1/1:10,1:25:19.93:58,20,0	0/0:16,0:27:32.02:0,32,198	0/0:11,0:26:19.19:0,19,123	0/0:21,1:31:8.75:0,9,155	0/1:27,4:35:16.52:17,0,351	0/1:18,3:22:22.15:22,0,266	0/1:27,3:29:1.89:2,0,293	1/1:7,0:22:28.44:82,28,0	0/0:18,1:20:18.89:0,19,234	0/1:34,4:38:4.02:4,0,384	0/0:15,1:16:8.96:0,9,184	0/0:9,0:25:42.26:0,42,261	0/0:12,0:19:20.66:0,21,155	0/0:7,0:21:25.93:0,26,151	1/1:3,2:20:32.33:112,32,0	0/0:26,1:31:12.67:0,13,261	0/0:23,4:30:4.04:0,4,331	0/0:3,0:3:3:0,3,25
chr10	73867232	.	GAA	G	1324.60	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.482;DP=729;FS=3.470;HRun=2;HaplotypeScore=81.9366;InbreedingCoeff=0.9978;MQ=82.53;MQ0=0;MQRankSum=-5.801;QD=42.73;ReadPosRankSum=2.354;VQSLOD=3.7068;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:87.30:1419,87,0	0/0:8,0:8:24.08:0,24,488	0/0:22,0:22:60.20:0,60,1159	0/0:25,0:25:72.24:0,72,1399	0/0:25,0:25:72.25:0,72,1436	0/0:25,0:25:75.26:0,75,1524	0/0:28,0:28:84.29:0,84,1698	0/0:28,0:28:81.25:0,81,1569	0/0:16,0:16:48.16:0,48,965	0/0:28,0:28:84.27:0,84,1662	0/0:30,0:30:90.31:0,90,1821	0/0:29,0:29:87.30:0,87,1759	0/0:34,0:34:99:0,102,2062	0/0:26,0:26:78.27:0,78,1583	0/0:35,0:35:99:0,105,2053	0/0:29,0:29:87.29:0,87,1734	0/0:24,0:24:72.25:0,72,1425	0/0:12,0:12:36.12:0,36,728	0/0:23,0:24:71.83:0,72,1406	0/0:38,0:38:99:0,114,2282	0/0:29,0:29:87.28:0,87,1731	0/0:24,0:24:69.24:0,69,1402	0/0:29,0:29:87.30:0,87,1760	0/0:27,0:27:81.28:0,81,1637	0/0:28,0:28:84.29:0,84,1700	0/0:30,0:30:87.28:0,87,1729	0/0:32,0:32:96.33:0,96,1933	0/0:13,0:13:39.13:0,39,793
chr10	73868117	.	GC	G	2494.08	PASS	AB=0.955;AC=20;AF=0.357;AN=56;BaseQRankSum=6.517;DP=434;FS=6.039;HRun=10;HaplotypeScore=59.0419;InbreedingCoeff=0.8312;MQ=82.12;MQ0=0;MQRankSum=-0.933;QD=14.01;ReadPosRankSum=0.288;VQSLOD=3.5464;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:23.54:0,24,144	0/0:7,0:7:18.04:0,18,192	0/1:26,0:19:11.01:11,0,145	0/0:19,0:16:7.85:0,8,113	0/0:13,0:13:10.63:0,11,289	0/0:23,1:24:40.11:0,40,660	0/0:11,0:11:33.09:0,33,365	0/0:14,0:14:12.03:0,12,133	0/0:12,0:12:27.06:0,27,289	1/1:4,14:18:38.35:312,38,0	1/1:3,13:16:38.91:331,39,0	1/1:1,12:13:35.98:312,36,0	1/1:1,17:18:38.99:338,39,0	0/0:19,1:23:24.92:0,25,486	0/0:28,0:28:74.53:0,75,810	0/0:14,0:14:42.03:0,42,428	0/0:15,0:15:20.15:0,20,300	0/0:1,0:5:14.39:0,14,83	0/1:9,1:10:5:5,0,178	1/1:4,18:22:16.75:359,17,0	0/0:11,0:11:24:0,24,242	1/1:2,18:20:44.88:381,45,0	1/1:0,10:10:21:182,21,0	1/1:3,5:8:14.99:130,15,0	1/1:1,15:17:41.02:345,41,0	0/0:15,0:15:13.64:0,14,325	0/0:16,0:16:42.11:0,42,462	0/0:12,0:12:15.04:0,15,166
chr10	73868127	.	C	CT	208.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.345;DP=444;FS=3.486;HRun=5;HaplotypeScore=73.9219;InbreedingCoeff=0.7722;MQ=81.32;MQ0=0;MQRankSum=-0.156;QD=13.05;ReadPosRankSum=-1.994;VQSLOD=2.2257;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:16:24.08:302,24,0	0/0:8,0:8:18.01:0,18,180	0/0:23,0:17:13.04:0,13,188	0/0:22,0:20:20.23:0,20,187	0/0:18,0:18:35.91:0,36,317	0/0:25,0:25:66.01:0,66,652	0/0:15,0:15:45.07:0,45,453	0/0:10,0:10:14.96:0,15,155	0/0:11,0:11:32.18:0,32,303	0/0:21,0:21:44.21:0,44,290	0/0:14,0:14:38.08:0,38,224	0/0:13,0:13:38.09:0,38,226	0/0:19,0:19:43.90:0,44,262	0/0:24,0:24:52.23:0,52,561	0/0:26,0:26:57.81:0,58,707	0/0:17,0:17:37.60:0,38,366	0/0:18,0:18:24.72:0,25,297	0/0:8,0:8:2.46:0,2,42	0/0:10,0:10:23.97:0,24,235	0/0:24,0:24:47.93:0,48,313	0/0:12,0:12:27.02:0,27,263	0/0:19,0:19:43.93:0,44,257	0/0:10,0:10:20.38:0,20,115	0/0:5,0:5:14.62:0,15,83	0/0:19,0:19:46.83:0,47,277	0/0:17,0:17:45.01:0,45,429	0/0:15,0:15:31.58:0,32,349	0/0:5,0:5:15.04:0,15,160
chr10	73870356	.	A	ATTTCT	15892.58	PASS	AB=0.985;AC=22;AF=0.393;AN=56;BaseQRankSum=-8.228;DP=707;FS=2.670;HRun=0;HaplotypeScore=128.2614;InbreedingCoeff=0.8807;MQ=74.70;MQ0=0;MQRankSum=-9.184;QD=50.94;ReadPosRankSum=-1.565;VQSLOD=5.0028;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,30:35:79.06:2021,79,0	0/0:10,0:10:27.09:0,27,551	0/0:23,0:22:25.26:0,25,645	0/1:22,0:20:31.39:31,0,463	0/0:20,0:20:57.18:0,57,1117	0/0:24,0:24:69.22:0,69,1376	0/0:28,0:28:69.22:0,69,1366	0/0:39,0:39:99:0,105,2091	0/0:19,0:19:48.15:0,48,934	1/1:3,23:26:66.23:1919,66,0	1/1:2,11:14:33.10:675,33,0	1/1:0,33:35:84.29:2559,84,0	1/1:8,24:32:60.21:1777,60,0	0/0:27,0:27:78.24:0,78,1505	0/0:30,0:30:75.23:0,75,1428	0/0:32,0:32:93.30:0,93,1822	0/0:22,0:22:63.20:0,63,1239	1/1:7,21:28:63.21:1739,63,0	0/0:31,0:31:81.26:0,81,1576	0/0:15,0:15:45.15:0,45,923	0/0:41,0:41:99:0,111,2237	1/1:7,12:19:37.01:804,37,0	1/1:0,14:15:39.13:993,39,0	1/1:3,26:30:57.67:1652,58,0	1/1:5,19:24:60.20:1720,60,0	0/1:31,1:32:1.34:1,0,1558	0/0:22,0:22:66.20:0,66,1280	0/0:12,0:12:36.12:0,36,717
chr10	73875048	.	TCTCC	T	1341.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.838;DP=683;FS=3.884;HRun=0;HaplotypeScore=130.9875;InbreedingCoeff=0.9957;MQ=71.83;MQ0=0;MQRankSum=-5.202;QD=41.91;ReadPosRankSum=1.217;VQSLOD=3.9703;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:72.25:1436,72,0	0/0:12,0:12:33.11:0,33,899	0/0:10,0:10:27.09:0,27,749	0/0:11,0:11:27.06:0,27,568	0/0:27,0:27:81.28:0,81,2265	0/0:24,0:24:63.20:0,63,1695	0/0:24,0:24:69.24:0,69,1931	0/0:21,0:21:60.21:0,60,1620	0/0:23,0:23:69.24:0,69,1931	0/0:26,0:26:75.25:0,75,2041	0/0:26,0:26:78.27:0,78,2166	0/0:34,0:34:99:0,102,2827	0/0:41,0:41:99:0,123,3420	0/0:19,0:19:57.20:0,57,1561	0/0:27,0:27:75.26:0,75,2068	0/0:27,0:27:81.28:0,81,2252	0/0:22,0:22:66.20:0,66,1731	0/0:26,0:26:78.21:0,78,2032	0/0:32,0:32:96.32:0,96,2625	0/0:31,0:31:93.32:0,93,2602	0/0:18,0:18:51.18:0,51,1423	0/0:26,0:26:75.26:0,75,2049	0/0:27,0:27:78.27:0,78,2167	0/0:33,0:33:99:0,99,2742	0/0:17,0:17:51.13:0,51,1290	0/0:35,0:35:99:0,102,2849	0/0:24,0:24:72.25:0,72,2012	0/0:8,0:8:24.08:0,24,671
chr10	73876789	.	C	CA	564.54	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.878;DP=481;FS=2.834;HRun=8;HaplotypeScore=43.3554;InbreedingCoeff=0.8637;MQ=78.10;MQ0=0;MQRankSum=-1.353;QD=22.58;ReadPosRankSum=-1.068;VQSLOD=3.3915;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:25:38.40:659,38,0	0/0:6,0:6:18.01:0,18,165	0/0:11,0:11:12.47:0,12,110	0/0:12,0:13:18.42:0,18,155	0/0:22,0:22:60.02:0,60,549	0/0:16,0:16:39.02:0,39,357	0/0:10,0:10:21:0,21,192	0/0:30,0:30:75.03:0,75,686	0/0:24,1:25:31.42:0,31,542	0/0:19,1:20:13.40:0,13,377	0/0:16,0:16:45.01:0,45,407	0/0:15,0:15:42.02:0,42,384	0/0:16,0:16:36.01:0,36,329	0/0:14,0:14:36.02:0,36,330	0/0:19,1:20:25.40:0,25,482	0/0:25,0:25:72.03:0,72,659	0/0:33,0:33:93.02:0,93,841	0/0:17,0:17:44.99:0,45,405	0/0:21,0:21:42:0,42,384	0/0:14,0:14:39.02:0,39,357	0/0:8,0:8:24.01:0,24,220	0/0:15,0:15:36:0,36,325	0/0:10,0:10:30.02:0,30,275	0/0:11,0:11:30.02:0,30,274	0/0:21,0:21:54.01:0,54,490	0/0:13,1:14:7.40:0,7,322	0/0:21,0:21:54.03:0,54,494	0/0:12,0:12:30.01:0,30,274
chr10	73878619	.	ATCTACCAAGGC	A	1543.73	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.101;DP=813;FS=0.900;HRun=0;HaplotypeScore=243.7346;InbreedingCoeff=0.9845;MQ=88.05;MQ0=0;MQRankSum=-7.181;QD=35.08;ReadPosRankSum=0.087;VQSLOD=3.0160;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,34:44:54.06:1639,54,0	0/0:16,0:16:45.15:0,45,2290	0/0:33,0:33:99:0,99,4153	0/0:26,0:25:69.24:0,69,3338	0/0:36,0:36:99:0,108,5439	0/0:28,0:28:78.27:0,78,4200	0/0:27,0:27:75.26:0,75,3745	0/0:34,0:34:96.31:0,96,4817	0/0:34,0:34:99:0,102,5399	0/0:36,0:36:99:0,108,5744	0/0:17,0:17:51.18:0,51,2710	0/0:34,0:34:99:0,99,5183	0/0:34,0:34:96.30:0,96,4609	0/0:27,0:27:78.27:0,78,4003	0/0:40,0:40:99:0,120,6278	0/0:40,0:40:99:0,120,6287	0/0:19,0:19:54.19:0,54,3069	0/0:27,0:27:78.23:0,78,3872	0/0:25,0:25:72.23:0,72,3507	0/0:31,0:31:90.31:0,90,4780	0/0:31,0:31:90.31:0,90,4827	0/0:29,0:29:84.29:0,84,4703	0/0:23,0:23:69.22:0,69,3564	0/0:26,0:26:75.24:0,75,3831	0/0:26,0:26:78.27:0,78,4297	0/0:28,0:28:81.26:0,81,4137	0/0:37,0:36:99:0,111,6038	0/0:5,0:5:15.05:0,15,865
chr10	73878803	.	A	AT	684.45	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.992;DP=778;FS=4.355;HRun=4;HaplotypeScore=83.7267;InbreedingCoeff=0.9917;MQ=81.87;MQ0=0;MQRankSum=-4.590;QD=32.59;ReadPosRankSum=-0.559;VQSLOD=3.8727;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:57.19:779,57,0	0/0:17,0:17:48.14:0,48,544	0/0:18,0:18:35.94:0,36,364	0/0:23,0:23:37.50:0,38,463	0/0:33,0:33:99:0,99,1101	0/0:38,0:38:99:0,108,1225	0/0:16,0:16:36.10:0,36,408	0/0:31,0:31:87.24:0,87,978	0/0:27,0:27:78.21:0,78,875	0/0:37,0:37:99:0,105,1191	0/0:26,0:26:69.18:0,69,772	0/0:30,0:30:84.24:0,84,952	0/0:32,0:32:90.26:0,90,1021	0/0:21,0:21:57.15:0,57,636	0/0:37,0:37:99:0,111,1247	0/0:45,0:45:99:0,120,1361	0/0:19,0:19:48.13:0,48,545	0/0:16,0:16:48.14:0,48,544	0/0:19,0:19:48.13:0,48,544	0/0:43,0:43:99:0,129,1444	0/0:36,0:36:99:0,99,1123	0/0:31,0:31:90.24:0,90,1010	0/0:23,0:23:63.16:0,63,704	0/0:38,0:38:99:0,105,1191	0/0:26,0:26:72.19:0,72,808	0/0:31,0:31:87.25:0,87,987	0/0:38,0:38:99:0,114,1292	0/0:6,0:6:18.05:0,18,204
chr10	73880174	.	C	CAGAT	1967.21	PASS	AB=0.780;AC=9;AF=0.180;AN=50;BaseQRankSum=-7.525;DP=691;FS=3.469;HRun=0;HaplotypeScore=163.8037;InbreedingCoeff=0.2550;MQ=69.73;MQ0=3;MQRankSum=5.206;QD=10.41;ReadPosRankSum=-2.329;VQSLOD=2.8651;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:33:19.27:0,19,170	0/0:7,0:10:6.01:0,6,56	./.	./.	0/0:23,0:38:32.70:0,33,303	0/1:16,10:26:64.35:390,0,64	1/1:14,0:14:9.02:118,9,0	./.	0/0:12,0:18:15.02:0,15,140	0/0:12,0:20:17.05:0,17,145	0/0:9,0:17:17.95:0,18,155	0/0:32,0:32:30:0,30,271	0/0:29,0:29:29.07:0,29,257	0/1:21,13:35:17.87:525,0,18	0/1:26,12:38:62.83:456,0,63	0/1:20,12:36:3.95:458,0,4	0/0:17,0:17:16.60:0,17,200	0/0:15,0:17:1.31:0,1,25	0/0:14,0:14:15.05:0,15,224	0/0:26,0:26:24.06:0,24,336	1/1:17,7:26:6.02:138,6,0	0/0:30,0:30:22.43:0,22,194	0/0:22,0:22:27.03:0,27,248	0/0:18,0:18:8.84:0,9,83	0/0:15,0:22:15.02:0,15,140	0/0:16,0:28:27.04:0,27,256	0/0:34,0:34:30.08:0,30,420	0/1:9,0:14:20.48:20,0,94
chr10	73880230	.	TAGATAGCA	T	3742.76	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=10.390;DP=723;FS=8.627;HRun=0;HaplotypeScore=200.7153;InbreedingCoeff=0.5478;MQ=64.95;MQ0=11;MQRankSum=-10.524;QD=14.74;ReadPosRankSum=0.226;VQSLOD=2.0702;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:36:50.94:0,51,881	0/0:6,0:6:12.04:0,12,167	0/0:15,0:13:32.37:0,32,522	0/0:16,0:10:16.79:0,17,329	0/1:44,0:44:3.43:3,0,1538	0/0:23,0:23:57.20:0,57,1686	0/0:18,0:18:48.16:0,48,966	0/0:46,0:41:99:0,111,1975	0/1:17,0:17:99:119,0,426	0/1:19,0:19:24.28:24,0,590	0/1:20,0:20:86.34:86,0,452	1/1:0,31:31:29.78:857,30,0	1/1:2,28:31:29.06:854,29,0	0/0:35,0:35:84.25:0,84,2120	0/0:37,0:37:90.31:0,90,2306	0/0:41,0:41:55.70:0,56,1898	0/0:19,0:19:10.70:0,11,1051	0/0:16,0:15:24.78:0,25,587	0/0:25,0:24:72.25:0,72,1695	0/0:32,0:32:93.32:0,93,2177	0/0:25,0:25:51.13:0,51,952	1/1:0,27:27:30.10:649,30,0	1/1:0,30:30:26.77:712,27,0	1/1:3,13:16:11.71:304,12,0	0/1:19,0:19:99:134,0,524	0/0:31,0:31:22.53:0,23,1292	0/0:23,0:21:69.24:0,69,1873	0/0:25,0:24:66.21:0,66,1071
chr10	73880687	.	T	TG	4472.42	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-13.135;DP=712;FS=7.968;HRun=3;HaplotypeScore=65.0130;InbreedingCoeff=1.0000;MQ=85.09;MQ0=0;MQRankSum=-1.938;QD=38.23;ReadPosRankSum=-0.607;VQSLOD=4.6603;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,39:40:99:1596,114,0	0/0:17,0:17:51.14:0,51,600	0/0:30,0:30:79.78:0,80,928	0/0:15,0:15:39.09:0,39,468	0/0:42,0:42:99:0,117,1404	0/0:24,0:24:72.22:0,72,861	0/0:20,0:20:57.15:0,57,671	0/0:33,0:33:93.28:0,93,1108	0/0:22,0:22:63.19:0,63,756	1/1:1,19:20:57.19:799,57,0	1/1:3,24:27:66.22:909,66,0	0/0:28,0:28:81.25:0,81,972	0/0:23,0:23:69.18:0,69,802	0/0:28,0:28:84.24:0,84,996	0/0:29,0:29:87.25:0,87,1031	0/0:32,0:32:96.28:0,96,1140	0/0:24,0:24:72.22:0,72,863	0/0:15,0:15:42.13:0,42,504	0/0:16,0:16:42.13:0,42,504	0/0:26,0:26:72.21:0,72,852	0/0:20,0:20:60.17:0,60,708	0/0:25,0:25:72.18:0,72,839	0/0:37,0:37:99:0,105,1245	0/0:20,0:20:60.18:0,60,720	1/1:2,28:30:84.28:1169,84,0	0/0:27,0:27:81.25:0,81,972	0/0:28,0:28:81.23:0,81,959	0/0:14,0:14:42.13:0,42,504
chr10	73884263	.	C	CA	1502.39	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.768;DP=663;FS=0.000;HRun=2;HaplotypeScore=64.5491;InbreedingCoeff=0.9964;MQ=80.79;MQ0=0;MQRankSum=-3.556;QD=37.56;ReadPosRankSum=0.088;VQSLOD=4.0015;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:40:99:1597,111,0	0/0:8,0:8:24.06:0,24,285	0/0:13,0:13:27.08:0,27,334	0/0:20,0:20:40.52:0,41,527	0/0:31,0:31:90.27:0,90,1102	0/0:22,0:22:66.21:0,66,817	0/0:27,0:27:81.23:0,81,977	0/0:30,0:30:84.25:0,84,1021	0/0:15,0:15:45.13:0,45,544	0/0:26,0:26:72.23:0,72,891	0/0:17,0:17:51.16:0,51,632	0/0:22,0:22:66.21:0,66,818	0/0:20,0:20:60.17:0,60,727	0/0:25,0:25:75.19:0,75,889	0/0:31,0:31:90.28:0,90,1114	0/0:26,0:26:75.21:0,75,904	0/0:32,0:32:93.29:0,93,1152	0/0:18,0:18:51.16:0,51,631	0/0:28,0:28:78.19:0,78,917	0/0:37,0:37:99:0,105,1289	0/0:21,0:21:63.18:0,63,767	0/0:17,0:17:51.15:0,51,621	0/0:16,0:16:48.15:0,48,595	0/0:20,0:20:54.11:0,54,638	0/0:24,0:24:65.97:0,66,773	0/0:32,0:32:95.51:0,96,1160	0/0:35,0:35:99:0,99,1226	0/0:10,0:10:30.09:0,30,371
chr10	73885323	.	ATTTGT	A	884.81	PASS	AB=0.965;AC=4;AF=0.074;AN=54;BaseQRankSum=3.785;DP=747;FS=7.838;HRun=0;HaplotypeScore=149.7778;InbreedingCoeff=0.3676;MQ=65.83;MQ0=2;MQRankSum=-0.244;QD=8.67;ReadPosRankSum=1.158;VQSLOD=2.3858;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,19:46:54.18:946,54,0	0/0:10,0:10:12.04:0,12,224	0/0:30,0:29:3.01:0,3,76	./.	0/0:34,0:34:75.23:0,75,1973	0/0:23,0:23:36.12:0,36,983	0/0:32,0:32:42.14:0,42,1082	0/0:40,0:40:24.06:0,24,357	0/0:20,0:20:36.12:0,36,969	0/0:27,0:30:48.16:0,48,1141	0/0:20,0:28:51.13:0,51,1051	0/0:15,0:29:48.16:0,48,1046	0/0:11,0:28:42.14:0,42,883	0/0:26,0:26:48.16:0,48,1250	0/0:25,0:25:54.19:0,54,1487	0/0:27,0:27:45.12:0,45,1137	0/0:23,0:23:49.41:0,49,1323	0/1:13,1:26:26.50:27,0,509	0/1:28,1:29:26.51:27,0,626	0/0:17,0:16:30.09:0,30,715	0/0:21,0:21:33.11:0,33,915	0/0:14,0:25:36.12:0,36,802	0/0:14,0:28:33.11:0,33,773	0/0:11,0:31:54.18:0,54,1137	0/0:17,0:24:39.11:0,39,919	0/0:22,0:22:36.11:0,36,944	0/0:30,0:30:48.16:0,48,1337	0/0:11,0:11:3.01:0,3,84
chr10	73886005	.	CGT	C	53.65	PASS	AB=0.929;AC=3;AF=0.054;AN=56;BaseQRankSum=3.674;DP=1057;FS=0.000;HRun=0;HaplotypeScore=137.2029;InbreedingCoeff=0.6313;MQ=61.89;MQ0=12;MQRankSum=0.506;QD=1.19;ReadPosRankSum=-0.396;VQSLOD=2.3495;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,17:32:11.88:138,12,0	0/0:13,0:13:12.14:0,12,434	0/0:61,0:29:51.59:0,52,658	0/0:56,1:32:18.84:0,19,820	0/0:19,0:18:51.14:0,51,807	0/0:24,0:24:72.25:0,72,1198	0/0:42,0:42:99:0,111,1801	0/0:40,0:39:73.01:0,73,1636	0/0:45,1:46:56.18:0,56,1587	0/0:44,1:45:84.77:0,85,1895	0/1:12,1:11:8.52:9,0,373	0/0:54,0:54:99:0,99,1654	0/0:35,1:35:72.25:0,72,1208	0/0:50,0:50:99:0,132,2181	0/0:57,1:58:99:0,127,2594	0/0:47,0:47:99:0,123,1998	0/0:52,0:52:99:0,135,2220	0/0:38,0:36:90.26:0,90,1480	0/0:21,0:20:44.97:0,45,693	0/0:22,0:22:57.20:0,57,961	0/0:92,1:92:99:0,202,3744	0/0:31,0:31:78.24:0,78,1239	0/0:24,1:25:27.63:0,28,932	0/0:39,0:39:66.20:0,66,1056	0/0:31,0:31:63.22:0,63,1056	0/0:28,0:27:66.21:0,66,1059	0/0:28,0:28:72.25:0,72,1205	0/0:12,0:12:36.12:0,36,581
chr10	73886068	.	ATG	A	2848.11	PASS	AB=0.763;AC=12;AF=0.214;AN=56;BaseQRankSum=11.033;DP=1027;FS=0.414;HRun=0;HaplotypeScore=150.3765;InbreedingCoeff=0.4248;MQ=53.67;MQ0=15;MQRankSum=-0.824;QD=8.40;ReadPosRankSum=5.302;VQSLOD=3.3146;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,10:28:0.01:0,0,1	0/0:9,0:9:24.08:0,24,398	0/0:51,1:10:15.05:0,15,237	0/0:52,0:16:36.12:0,36,586	0/0:27,0:27:75.26:0,75,1254	0/0:25,0:25:63.21:0,63,1054	0/0:43,0:43:87.26:0,87,1430	0/0:35,1:34:37.08:0,37,1144	0/0:44,0:44:99:0,117,1896	0/1:20,28:48:99:880,0,486	0/1:5,6:9:82.11:97,0,82	0/1:49,4:53:0.23:0,0,0	0/1:32,1:33:0:0,0,0	0/0:39,0:39:99:0,111,1827	0/0:48,0:48:99:0,123,2046	0/0:28,0:28:81.26:0,81,1324	0/0:42,0:42:99:0,114,1890	1/1:21,17:36:38.20:842,38,0	0/0:16,0:14:36.10:0,36,556	0/0:18,0:18:51.17:0,51,853	0/0:150,0:149:99:0,385,6159	0/1:11,14:25:74.91:272,0,75	1/1:3,18:21:29.65:381,30,0	0/1:19,34:53:24.80:519,0,25	0/1:27,2:29:0.26:0,0,0	0/0:23,1:24:33.41:0,33,1075	0/0:23,0:23:60.15:0,60,928	0/0:10,0:10:30.10:0,30,502
chr10	73886071	.	T	TGTGTGTGTATGC	5539.39	PASS	AB=0.894;AC=17;AF=0.304;AN=56;BaseQRankSum=10.102;DP=1056;FS=7.329;HRun=0;HaplotypeScore=312.8002;InbreedingCoeff=0.5577;MQ=53.68;MQ0=18;MQRankSum=2.666;QD=14.06;ReadPosRankSum=0.534;VQSLOD=2.3349;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:18.93:19,0,24	0/0:9,0:9:24.08:0,24,621	0/0:51,0:8:15.05:0,15,235	0/0:51,0:14:36.12:0,36,585	0/0:26,0:26:78.22:0,78,1861	0/0:26,0:26:66.20:0,66,1388	0/0:40,0:40:87.20:0,87,1935	0/0:37,0:35:48.08:0,48,1221	0/0:41,0:41:99:0,117,2861	1/1:51,0:50:99:2614,138,0	1/1:12,0:10:18.06:296,18,0	1/1:10,46:65:0.88:3,1,0	1/1:7,28:41:3.47:26,3,0	0/0:42,0:42:99:0,111,2869	0/0:46,0:46:99:0,122,2888	0/0:30,0:30:81.25:0,81,1894	0/0:43,0:43:99:0,114,2794	0/1:34,0:34:99:492,0,225	0/0:17,0:15:39.08:0,39,625	0/0:17,0:17:51.17:0,51,1387	0/0:153,0:152:99:0,388,9143	1/1:26,0:26:36.11:572,36,0	1/1:22,0:22:33.06:439,33,0	0/1:54,1:55:83.83:998,0,84	0/1:5,22:32:0:1,0,0	0/1:25,0:25:80.21:80,0,1628	0/0:23,0:23:60.15:0,60,1418	0/0:10,0:10:30.10:0,30,630
chr10	73886099	.	CGT	C	720.34	PASS	AB=0.864;AC=3;AF=0.054;AN=56;BaseQRankSum=7.864;DP=1055;FS=0.614;HRun=0;HaplotypeScore=173.1878;InbreedingCoeff=0.4993;MQ=53.37;MQ0=13;MQRankSum=-0.942;QD=12.42;ReadPosRankSum=-0.778;VQSLOD=3.4853;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:1.54:0,2,5	0/0:10,0:10:18.06:0,18,301	0/0:32,0:5:4.69:0,5,74	0/0:39,0:9:16.64:0,17,235	0/0:25,0:25:72.22:0,72,1134	0/0:23,1:24:16.44:0,16,753	0/0:37,0:37:93.32:0,93,1529	0/0:30,0:28:66.21:0,66,1026	0/0:39,0:39:88.12:0,88,1515	0/0:48,2:49:52.96:0,53,1727	0/0:14,0:14:33.08:0,33,500	0/0:59,1:60:46.56:0,47,705	0/0:38,1:39:3.90:0,4,562	0/0:55,0:55:99:0,153,2428	0/0:47,1:48:99:0,120,1908	0/0:40,0:40:99:0,102,1651	0/0:38,1:39:55.63:0,56,1429	1/1:20,19:37:46.25:797,46,0	0/0:15,0:11:27.06:0,27,413	0/0:25,0:25:69.09:0,69,1066	0/0:157,13:166:84.52:0,85,5561	0/0:29,0:29:48.04:0,48,740	0/0:21,0:21:21.07:0,21,325	0/0:53,0:51:60.07:0,60,845	0/0:30,1:31:20.76:0,21,351	0/0:31,0:31:81.28:0,81,1329	0/1:16,3:19:28.19:28,0,637	0/0:7,0:7:18.06:0,18,301
chr10	73886125	.	CATGCGTGTGTGT	C	95.75	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.409;DP=1005;FS=6.145;HRun=0;HaplotypeScore=335.0154;InbreedingCoeff=0.9009;MQ=54.83;MQ0=8;MQRankSum=-3.961;QD=3.83;ReadPosRankSum=-3.657;VQSLOD=1.0902;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,4:25:13.39:183,13,0	0/0:7,0:7:9.03:0,9,416	0/0:37,0:11:15.12:0,15,576	0/0:33,0:15:21.01:0,21,928	0/0:25,0:25:58.21:0,58,2593	0/0:20,0:20:54.16:0,54,2374	0/0:36,0:36:75.17:0,75,2639	0/0:26,0:26:51.15:0,51,1698	0/0:40,0:40:61.40:0,61,3279	0/0:43,0:43:88.03:0,88,3884	0/0:15,0:15:39.13:0,39,1892	0/0:58,0:58:81.27:0,81,3838	0/0:45,0:45:90.30:0,90,4247	0/0:53,0:53:99:0,138,6143	0/0:50,0:50:99:0,138,5576	0/0:43,0:43:99:0,117,5451	0/0:34,0:34:87.28:0,87,3555	0/0:34,0:32:63.45:0,63,2740	0/0:16,0:15:42.14:0,42,1486	0/0:24,0:24:60.21:0,60,2925	0/0:160,0:159:99:0,361,14980	0/0:32,0:32:63.21:0,63,2847	0/0:15,0:15:30.09:0,30,1613	0/0:40,0:38:66.22:0,66,3139	0/0:33,0:33:51.16:0,51,2492	0/0:32,0:32:69.21:0,69,3419	0/0:21,0:21:60.21:0,60,2358	0/0:8,0:8:21.07:0,21,917
chr10	73886137	.	T	TGTTC	317.08	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.148;DP=1055;FS=13.999;HRun=0;HaplotypeScore=212.5376;InbreedingCoeff=0.9842;MQ=54.41;MQ0=7;MQRankSum=-5.999;QD=10.93;ReadPosRankSum=-5.013;VQSLOD=0.7153;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:18,4:29:34.13:412,34,0	0/0:5,0:5:15.05:0,15,295	0/0:43,0:17:48.12:0,48,784	0/0:46,0:22:40.42:0,40,882	0/0:26,0:26:74.82:0,75,1441	0/0:21,0:21:60.18:0,60,1153	0/0:31,0:31:93.22:0,93,1656	0/0:27,0:27:78.26:0,78,1499	0/0:43,0:43:99:0,111,2082	0/0:47,1:48:82.40:0,82,2516	0/0:18,0:18:48.16:0,48,956	0/0:57,0:57:95.79:0,96,1898	0/0:44,0:44:96.22:0,96,1975	0/0:53,0:53:99:0,153,3093	0/0:55,0:55:99:0,155,3082	0/0:45,0:45:99:0,126,2590	0/0:35,0:36:75.99:0,76,1986	0/0:39,0:37:80:0,80,1461	0/0:17,0:17:51.17:0,51,1006	0/0:24,0:24:69.24:0,69,1386	0/0:148,0:148:99:0,387,7798	0/0:32,1:33:77.93:0,78,1542	0/0:15,3:18:42.04:0,42,827	0/0:43,0:42:84.06:0,84,1646	0/0:32,0:32:56.97:0,57,1140	0/0:28,0:28:76.55:0,77,1540	0/0:27,0:27:78.03:0,78,1521	0/0:15,0:15:42.14:0,42,739
chr10	73886169	.	T	TGC	594.97	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.280;DP=998;FS=23.187;HRun=0;HaplotypeScore=153.8359;InbreedingCoeff=0.9987;MQ=64.93;MQ0=4;MQRankSum=-5.336;QD=16.08;ReadPosRankSum=0.977;VQSLOD=2.1516;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:37:36.12:690,36,0	0/0:9,0:9:27.02:0,27,385	0/0:45,0:32:93.21:0,93,1311	0/0:58,0:42:99:0,117,1663	0/0:18,0:18:54.17:0,54,803	0/0:25,0:25:69.20:0,69,1010	0/0:28,0:28:78.22:0,78,1126	0/0:29,0:29:87.25:0,87,1218	0/0:39,0:39:99:0,100,1543	0/0:31,0:31:93.30:0,93,1392	0/0:14,0:14:42.12:0,42,614	0/0:41,0:41:99:0,111,1625	0/0:47,0:47:99:0,129,1792	0/0:42,0:42:99:0,117,1689	0/0:49,0:49:99:0,138,2026	0/0:52,0:52:99:0,150,2142	0/0:37,0:37:99:0,106,1451	0/0:36,0:34:78.18:0,78,1121	0/0:18,0:18:51.12:0,51,733	0/0:28,0:28:78.21:0,78,1127	0/0:111,0:112:99:0,272,4127	0/0:29,0:29:87.20:0,87,1226	0/0:24,0:24:66.21:0,66,983	0/0:49,0:48:99:0,120,1784	0/0:27,0:27:78.23:0,78,1132	0/0:36,0:36:99:0,102,1498	0/0:23,0:23:66.19:0,66,967	0/0:14,0:14:35.84:0,36,528
chr10	73887004	.	C	CA	150.91	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.950;DP=577;FS=5.009;HRun=2;HaplotypeScore=61.7220;InbreedingCoeff=0.9308;MQ=76.58;MQ0=0;MQRankSum=-3.595;QD=9.43;ReadPosRankSum=-0.930;VQSLOD=0.9489;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,9:16:9.04:234,9,0	0/0:13,0:13:36.10:0,36,432	0/0:18,0:18:48.15:0,48,587	0/0:15,0:15:35.36:0,35,418	0/0:27,0:27:78.23:0,78,953	0/0:21,0:21:60.19:0,60,743	0/0:15,0:15:45.14:0,45,557	0/0:21,0:21:60.16:0,60,727	0/0:28,0:28:84.26:0,84,1041	0/0:24,0:24:72.23:0,72,892	0/0:20,0:20:57.15:0,57,682	0/0:21,0:21:63.19:0,63,768	0/0:24,0:24:69.22:0,69,855	0/0:23,0:23:69.22:0,69,855	0/0:22,0:22:60.18:0,60,731	0/0:41,0:41:99:0,117,1437	0/0:17,0:17:48.15:0,48,593	0/0:14,0:14:42.09:0,42,503	0/0:17,0:16:45.14:0,45,558	0/0:29,0:29:81.25:0,81,1004	0/0:22,0:22:63.18:0,63,767	0/0:13,0:13:39.12:0,39,484	0/0:22,0:22:60.19:0,60,744	0/0:19,0:19:57.18:0,57,706	0/0:22,0:22:60.19:0,60,744	0/0:23,0:23:66.20:0,66,806	0/0:24,0:24:72.21:0,72,880	0/0:6,0:6:18.03:0,18,208
chr10	73887008	.	A	AGGCCTCCCT	1392.45	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.782;DP=580;FS=0.000;HRun=0;HaplotypeScore=159.8861;InbreedingCoeff=0.9953;MQ=75.06;MQ0=0;MQRankSum=-5.807;QD=77.36;ReadPosRankSum=-0.659;VQSLOD=3.5290;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,9:18:34.62:1487,35,0	0/0:11,0:11:33.10:0,33,995	0/0:18,0:18:48.16:0,48,1473	0/0:14,0:14:36.12:0,36,1063	0/0:28,0:28:84.27:0,84,2602	0/0:20,0:20:57.18:0,57,1776	0/0:16,0:16:42.14:0,42,1352	0/0:24,0:24:72.24:0,72,2098	0/0:29,0:29:84.29:0,84,2699	0/0:24,0:24:72.25:0,72,2295	0/0:20,0:20:60.21:0,60,1868	0/0:20,0:20:60.21:0,60,1906	0/0:24,0:24:72.25:0,72,2326	0/0:25,0:25:72.23:0,72,2271	0/0:22,0:22:66.21:0,66,2016	0/0:41,0:41:99:0,114,3584	0/0:15,0:15:45.15:0,45,1403	0/0:14,0:14:39.13:0,39,1272	0/0:16,0:16:48.16:0,48,1563	0/0:28,0:28:81.28:0,81,2638	0/0:21,0:21:63.20:0,63,1938	0/0:14,0:14:42.14:0,42,1282	0/0:23,0:23:66.23:0,66,2034	0/0:20,0:20:60.21:0,60,1808	0/0:20,0:20:60.21:0,60,1897	0/0:23,0:23:66.22:0,66,2049	0/0:25,0:25:75.24:0,75,2265	0/0:7,0:7:21.07:0,21,639
chr10	73887412	.	C	CCT	2033.61	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.509;DP=791;FS=0.000;HRun=0;HaplotypeScore=101.8633;InbreedingCoeff=0.9987;MQ=82.70;MQ0=0;MQRankSum=-5.593;QD=49.60;ReadPosRankSum=4.299;VQSLOD=4.7736;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,39:41:99:2128,108,0	0/0:17,0:17:45.14:0,45,710	0/0:20,0:20:54.18:0,54,856	0/0:24,0:24:72.24:0,72,1141	0/0:27,0:27:78.27:0,78,1269	0/0:32,0:32:96.33:0,96,1566	0/0:20,0:20:60.19:0,60,955	0/0:45,0:45:99:0,126,2035	0/0:21,0:21:63.16:0,63,975	0/0:31,0:31:87.27:0,87,1392	0/0:19,0:19:57.18:0,57,907	0/0:28,0:28:84.27:0,84,1344	0/0:27,0:27:78.26:0,78,1256	0/0:40,0:40:99:0,111,1787	0/0:43,0:43:99:0,129,2081	0/0:41,0:41:99:0,123,1980	0/0:24,0:24:69.24:0,69,1126	0/0:22,0:22:63.21:0,63,1022	0/0:11,0:11:33.10:0,33,512	0/0:25,0:25:69.22:0,69,1102	0/0:56,0:56:99:0,166,2665	0/0:22,0:22:63.21:0,63,1023	0/0:29,0:29:87.28:0,87,1394	0/0:25,0:25:75.24:0,75,1196	0/0:23,0:23:69.24:0,69,1126	0/0:43,0:43:99:0,117,1864	0/0:26,0:26:78.25:0,78,1245	0/0:9,0:9:27.09:0,27,441
chr10	73890745	.	C	CT	5885.30	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=16.798;DP=737;FS=2.951;HRun=2;HaplotypeScore=80.4548;InbreedingCoeff=0.9997;MQ=83.12;MQ0=0;MQRankSum=-2.660;QD=39.50;ReadPosRankSum=3.093;VQSLOD=5.3494;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:44:99:1701,120,0	0/0:13,0:13:39.13:0,39,545	0/0:22,0:22:46.70:0,47,755	0/0:19,0:19:57.13:0,57,743	0/0:42,0:42:99:0,120,1642	0/0:25,0:25:72.24:0,72,1003	0/0:22,0:22:66.22:0,66,916	0/0:30,0:30:75.25:0,75,1044	0/0:25,0:25:72.22:0,72,983	1/1:1,26:28:78.25:1105,78,0	1/1:0,35:36:99:1430,105,0	0/0:25,0:25:75.25:0,75,1042	0/0:36,0:36:99:0,105,1465	0/0:24,0:24:72.24:0,72,1006	0/0:37,0:37:99:0,111,1551	0/0:34,0:34:99:0,99,1382	0/0:16,0:16:48.16:0,48,671	1/1:0,16:16:45.15:649,45,0	0/0:26,0:26:78.23:0,78,1060	0/0:19,0:19:51.17:0,51,713	0/0:27,0:27:78.26:0,78,1087	0/0:27,0:27:81.27:0,81,1131	0/0:26,0:26:78.24:0,78,1067	0/0:19,0:19:54.18:0,54,755	1/1:0,24:25:72.23:1000,72,0	0/0:25,0:25:75.25:0,75,1048	0/0:39,0:37:99:0,111,1544	0/0:10,0:10:27.09:0,27,377
chr10	73890956	.	C	CGTT	3593.62	PASS	AB=0.622;AC=7;AF=0.125;AN=56;BaseQRankSum=-3.577;DP=722;FS=0.995;HRun=0;HaplotypeScore=106.6826;InbreedingCoeff=0.8730;MQ=70.79;MQ0=0;MQRankSum=-2.717;QD=33.59;ReadPosRankSum=-0.679;VQSLOD=3.9846;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:38:52.41:693,52,0	0/0:16,0:16:24.08:0,24,340	0/0:22,0:20:12.02:0,12,148	0/0:25,0:22:14.82:0,15,386	0/0:31,0:31:78.26:0,78,1106	0/0:15,0:15:27.09:0,27,379	0/0:36,0:36:87.22:0,87,1173	0/0:43,0:43:75.20:0,75,1022	0/0:33,0:33:78.26:0,78,1105	1/1:4,8:15:36.10:642,36,0	1/1:4,27:30:75.26:1514,75,0	0/0:18,0:18:51.13:0,51,666	0/0:30,0:31:78.20:0,78,1049	0/0:24,0:24:57.17:0,57,789	0/0:35,0:35:63.16:0,63,836	0/0:34,0:34:81.27:0,81,1148	0/0:30,0:29:63.21:0,63,891	0/0:15,0:15:33.07:0,33,445	0/0:25,0:25:39.11:0,39,521	0/0:25,0:25:60.19:0,60,831	0/0:39,0:39:93.29:0,93,1297	0/0:18,0:18:39.09:0,39,530	0/0:15,0:15:36.12:0,36,510	0/0:27,0:29:78.19:0,78,1063	0/1:9,13:23:0.41:745,0,0	0/0:27,1:28:8.64:0,9,859	0/0:22,0:22:54.18:0,54,766	0/0:6,0:6:9.03:0,9,128
chr10	73891303	.	GT	G	773.64	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.288;DP=659;FS=0.000;HRun=3;HaplotypeScore=62.6581;InbreedingCoeff=0.9958;MQ=82.70;MQ0=0;MQRankSum=-3.307;QD=26.68;ReadPosRankSum=0.565;VQSLOD=2.7526;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:72.06:869,72,0	0/0:19,0:19:54.18:0,54,776	0/0:16,0:16:45.03:0,45,592	0/0:20,0:20:47.27:0,47,578	0/0:26,0:26:75.25:0,75,1069	0/0:34,0:34:99:0,102,1464	0/0:14,0:14:42.13:0,42,583	0/0:32,0:32:96.31:0,96,1355	0/0:28,0:28:84.28:0,84,1209	0/0:21,0:21:63.21:0,63,898	0/0:17,0:17:51.16:0,51,707	0/0:30,0:30:90.28:0,90,1253	0/0:28,0:28:75.23:0,75,1042	0/0:18,0:18:54.15:0,54,724	0/0:31,0:31:90.29:0,90,1273	0/0:27,0:27:81.25:0,81,1126	0/0:28,0:28:84.19:0,84,1163	0/0:17,0:17:48.16:0,48,691	0/0:15,0:15:39.11:0,39,528	0/0:36,0:36:99:0,99,1378	0/0:27,0:27:75.25:0,75,1075	0/0:25,0:25:66.22:0,66,944	0/0:16,0:16:48.15:0,48,670	0/0:26,0:26:78.25:0,78,1104	0/0:25,0:25:72.23:0,72,1018	0/0:20,0:19:60.16:0,60,825	0/0:27,0:27:81.24:0,81,1135	0/0:7,0:7:21.07:0,21,302
chr10	73893219	.	G	GA	5898.71	PASS	AB=0.778;AC=51;AF=0.911;AN=56;BaseQRankSum=-4.599;DP=233;FS=0.000;HRun=1;HaplotypeScore=217.4111;InbreedingCoeff=0.1471;MQ=60.02;MQ0=1;MQRankSum=-1.682;QD=25.76;ReadPosRankSum=0.950;VQSLOD=4.4045;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,3:13:29.68:369,30,0	1/1:3,0:3:8.06:95,8,0	0/1:1,5:5:20.13:88,0,20	0/1:6,2:7:53.37:53,0,57	1/1:11,2:13:5.86:208,6,0	1/1:7,3:10:21.07:302,21,0	1/1:6,2:8:14.38:257,14,0	1/1:8,6:14:36.09:477,36,0	1/1:8,2:10:20.38:350,20,0	1/1:8,2:10:20.11:305,20,0	1/1:0,3:3:6.02:69,6,0	1/1:14,0:14:31.97:488,32,0	1/1:15,0:15:28.86:390,29,0	0/1:6,0:6:2.74:57,0,3	1/1:9,2:11:10.91:236,11,0	1/1:9,0:9:21.57:235,22,0	1/1:10,4:14:21.07:312,21,0	1/1:6,0:6:14.26:184,14,0	1/1:5,0:5:7.46:130,7,0	1/1:4,1:5:10.61:176,11,0	1/1:8,0:8:15.05:218,15,0	1/1:7,0:7:17.78:210,18,0	0/0:4,0:4:1.25:0,1,3	1/1:6,0:6:8.33:132,8,0	1/1:5,0:5:9.03:125,9,0	1/1:8,0:8:17.89:262,18,0	1/1:7,2:9:8.04:171,8,0	1/1:1,0:1:0.47:1,0,0
chr10	73893590	.	G	GT	2979.87	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.161;DP=515;FS=8.305;HRun=1;HaplotypeScore=120.1281;InbreedingCoeff=0.9813;MQ=73.95;MQ0=0;MQRankSum=-14.305;QD=17.22;ReadPosRankSum=3.702;VQSLOD=3.6540;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:18.55:0,19,81	0/0:6,0:6:17.97:0,18,191	0/0:19,0:19:47.58:0,48,544	0/0:19,0:19:41.79:0,42,445	0/0:9,0:9:17.71:0,18,187	0/0:20,0:20:51.09:0,51,627	0/0:21,0:21:54.13:0,54,684	0/0:20,0:20:42.05:0,42,446	0/0:22,0:22:57.10:0,57,732	1/1:11,19:30:63.60:648,64,0	1/1:5,17:22:38.03:363,38,0	1/1:7,13:22:61.26:459,61,0	1/1:8,18:26:44.85:531,45,0	0/0:23,0:23:57.16:0,57,754	0/0:27,0:27:72.15:0,72,873	0/0:22,0:22:63.17:0,63,813	0/0:18,0:18:50.97:0,51,625	1/1:7,4:11:9.49:187,9,0	0/0:17,0:17:42.06:0,42,471	0/0:13,0:13:17.36:0,17,276	0/0:19,0:19:51.01:0,51,587	1/1:5,12:17:35.65:291,36,0	1/1:1,22:23:34.04:301,34,0	1/1:2,5:7:14.99:126,15,0	1/1:4,9:14:38.01:287,38,0	0/0:20,1:21:31.99:0,32,591	0/0:24,0:24:63.14:0,63,768	0/0:6,0:6:15.03:0,15,177
chr10	73893591	.	G	GT	370.10	PASS	AB=0.633;AC=14;AF=0.250;AN=56;BaseQRankSum=14.753;DP=512;FS=0.880;HRun=0;HaplotypeScore=124.3077;InbreedingCoeff=0.6062;MQ=74.80;MQ0=0;MQRankSum=-13.791;QD=2.19;ReadPosRankSum=6.983;VQSLOD=2.1514;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:18.79:0,19,87	0/0:6,0:6:17.96:0,18,189	0/0:20,0:20:54.09:0,54,616	0/0:19,0:19:54.46:0,54,525	0/0:10,0:10:20.86:0,21,206	0/0:20,0:20:54.09:0,54,662	0/0:21,0:21:60.10:0,60,734	0/0:21,0:21:45.03:0,45,467	0/0:22,0:22:60.12:0,60,761	1/1:11,20:30:13.15:140,13,0	1/1:5,16:21:14.15:79,14,0	0/1:8,13:21:14.91:50,0,15	0/1:6,18:24:10.65:64,0,11	0/0:22,0:22:57.17:0,57,745	0/0:27,0:27:72.16:0,72,878	0/0:22,0:22:63.17:0,63,814	0/0:19,0:19:54.06:0,54,661	0/1:7,4:11:11.38:20,0,11	0/0:15,0:15:39.05:0,39,440	0/0:13,0:13:23.40:0,23,335	0/0:18,0:18:49.38:0,49,558	1/1:5,12:17:19.22:71,19,0	0/1:8,14:22:3.54:59,0,4	1/1:3,5:8:10.70:32,11,0	1/1:5,9:14:1.93:29,2,0	0/0:21,1:22:50.47:0,50,638	0/0:24,0:24:66.14:0,66,814	0/0:6,0:6:18.01:0,18,198
chr10	73893599	.	G	GAA	6302.07	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=16.322;DP=510;FS=5.692;HRun=0;HaplotypeScore=107.6714;InbreedingCoeff=0.9907;MQ=78.25;MQ0=0;MQRankSum=-11.450;QD=35.21;ReadPosRankSum=2.344;VQSLOD=7.3422;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:16:19.18:164,19,0	0/0:4,0:4:12.04:0,12,191	0/0:21,0:22:55.38:0,55,759	0/0:17,0:20:47.18:0,47,527	0/0:8,0:8:21.05:0,21,297	0/0:21,0:21:60.19:0,60,912	0/0:22,0:22:63.14:0,63,947	0/0:18,0:18:48.16:0,48,718	0/0:25,0:25:66.20:0,66,991	1/1:2,26:27:75.24:1139,75,0	1/1:1,21:22:59.28:762,59,0	1/1:0,19:19:45.15:685,45,0	1/1:6,19:25:72.17:1041,72,0	0/0:24,0:24:66.20:0,66,1013	0/0:27,0:27:78.24:0,78,1230	0/0:21,0:21:63.20:0,63,987	0/0:21,0:21:60.15:0,60,883	1/1:3,4:7:20.40:231,20,0	0/0:15,0:15:42.07:0,42,584	0/0:13,0:13:39.11:0,39,562	0/0:21,0:21:60.15:0,60,862	1/1:1,17:19:42.10:592,42,0	1/1:5,14:19:46.70:642,47,0	1/1:4,5:9:27.09:404,27,0	1/1:5,9:15:44.51:642,45,0	0/0:20,1:21:16.43:0,16,810	0/0:21,0:21:63.21:0,63,990	0/0:7,0:7:21.07:0,21,325
chr10	73894638	.	C	CA	4019.59	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=10.887;DP=551;FS=9.117;HRun=7;HaplotypeScore=91.1869;InbreedingCoeff=0.9823;MQ=67.14;MQ0=3;MQRankSum=-11.302;QD=25.77;ReadPosRankSum=-1.382;VQSLOD=3.1086;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:33.04:0,33,317	0/0:5,0:5:12.02:0,12,115	0/0:32,0:21:38.64:0,39,304	0/0:28,0:16:26.23:0,26,212	0/0:23,0:23:69.08:0,69,654	0/0:22,0:22:57.08:0,57,550	0/0:12,0:12:33.03:0,33,312	0/0:26,0:26:66.07:0,66,622	0/0:13,0:13:32.37:0,32,291	1/1:10,19:29:75.16:871,75,0	1/1:3,13:16:34.04:396,34,0	1/1:7,14:21:51.11:598,51,0	1/1:7,17:24:62.90:699,63,0	0/0:21,0:21:60.09:0,60,579	0/0:14,0:14:39.06:0,39,377	0/0:23,0:23:63.07:0,63,601	0/0:34,0:34:72.53:0,73,683	1/1:7,8:15:16.25:300,16,0	0/0:18,0:18:42.02:0,42,395	0/0:29,0:29:72.07:0,72,686	0/0:13,0:13:33.05:0,33,318	1/1:8,3:11:17.97:183,18,0	1/1:2,11:13:36.11:431,36,0	1/1:6,5:11:8.99:106,9,0	1/1:2,14:16:37.36:437,37,0	0/0:16,0:16:39.06:0,39,376	0/0:29,0:29:81.13:0,81,781	0/0:15,0:15:45.07:0,45,435
chr10	73894647	.	G	GA	1308.52	PASS	AB=0.923;AC=22;AF=0.393;AN=56;BaseQRankSum=14.611;DP=539;FS=0.000;HRun=10;HaplotypeScore=98.9889;InbreedingCoeff=0.8246;MQ=67.90;MQ0=2;MQRankSum=-11.925;QD=6.26;ReadPosRankSum=-1.273;VQSLOD=1.6745;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:16.24:76,16,0	0/0:6,0:7:20.02:0,20,154	0/0:27,0:20:17.77:0,18,228	0/1:22,0:14:16.46:16,0,163	0/0:24,0:25:61.97:0,62,498	0/0:22,0:22:53.81:0,54,434	0/0:12,0:12:29.94:0,30,243	0/0:32,0:32:68.83:0,69,560	0/0:14,1:15:6.96:0,7,264	1/1:29,0:29:72.35:358,72,0	1/1:16,0:16:31.33:148,31,0	1/1:21,0:21:37.15:170,37,0	1/1:24,0:25:36.46:171,36,0	0/0:21,0:21:56.92:0,57,468	0/0:15,0:15:41.95:0,42,345	0/0:23,0:23:47.89:0,48,394	0/0:29,0:29:74.88:0,75,610	1/1:18,0:18:14.54:106,15,0	0/0:15,0:15:32.94:0,33,268	0/0:28,0:28:74.90:0,75,614	0/1:9,2:11:37.01:37,0,145	1/1:8,0:8:13.99:65,14,0	1/1:15,0:15:34.26:152,34,0	1/1:8,0:8:11.14:50,11,0	1/1:18,0:18:36.36:175,36,0	0/0:15,0:15:32.94:0,33,268	0/0:27,1:28:42.92:0,43,559	0/0:16,0:16:41.93:0,42,345
chr10	73894653	.	A	AAAAAAC	10292.98	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=9.025;DP=538;FS=0.760;HRun=0;HaplotypeScore=126.9350;InbreedingCoeff=0.9421;MQ=71.45;MQ0=2;MQRankSum=-12.992;QD=49.72;ReadPosRankSum=-1.621;VQSLOD=4.5323;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,2:19:23.09:698,23,0	0/0:8,0:8:21.07:0,21,419	0/0:27,0:22:39.99:0,40,570	0/1:18,0:12:3.55:4,0,427	0/0:23,0:23:66.19:0,66,1283	0/0:20,0:20:53.06:0,53,1091	0/0:10,0:10:30.10:0,30,614	0/0:32,0:32:84.23:0,84,1479	0/0:15,0:15:41.86:0,42,788	1/1:5,27:34:90.26:2627,90,0	1/1:4,11:15:42.13:1228,42,0	1/1:6,0:23:48.13:964,48,0	1/1:7,0:29:48.13:1057,48,0	0/0:21,0:21:60.19:0,60,1218	0/0:15,0:15:42.14:0,42,877	0/0:21,0:21:51.12:0,51,1029	0/0:30,0:30:90.05:0,90,1541	1/1:15,0:16:39.99:690,40,0	0/0:13,0:13:36.10:0,36,681	0/0:25,0:25:75.26:0,75,1562	0/0:13,0:13:33.06:0,33,541	1/1:1,0:6:18.04:370,18,0	1/1:1,0:14:36.12:816,36,0	1/1:4,0:8:15.04:309,15,0	1/1:15,8:25:72.13:1530,72,0	0/0:15,0:15:36.09:0,36,678	0/0:27,0:27:75.23:0,75,1529	0/0:16,0:16:42.12:0,42,878
chr10	73894954	.	T	TC	792.74	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-1.256;DP=536;FS=0.773;HRun=7;HaplotypeScore=64.4582;InbreedingCoeff=0.9824;MQ=90.58;MQ0=0;MQRankSum=-1.735;QD=23.32;ReadPosRankSum=-1.084;VQSLOD=3.1796;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:54.07:0,54,521	0/0:7,0:7:15.02:0,15,145	0/0:15,0:15:41.72:0,42,378	0/0:28,0:28:53.18:0,53,505	0/0:13,0:13:24.02:0,24,232	0/0:23,0:23:63.10:0,63,608	0/0:33,0:33:87.11:0,87,834	0/0:21,0:21:39.03:0,39,368	0/0:23,0:23:45.04:0,45,435	1/1:1,15:16:42.12:498,42,0	1/1:1,8:9:21.06:253,21,0	0/0:16,0:16:36.04:0,36,347	0/0:19,0:19:50.99:0,51,476	0/0:16,0:16:33.04:0,33,318	0/0:30,0:30:69.04:0,69,657	0/0:24,0:24:63.09:0,63,608	0/0:34,0:34:84.13:0,84,811	0/0:20,0:20:60.07:0,60,572	0/0:19,0:19:45.07:0,45,433	0/0:13,0:13:33.05:0,33,319	0/0:33,0:33:84.10:0,84,806	0/0:8,0:8:20.93:0,21,190	0/0:11,0:11:24.03:0,24,232	0/0:28,0:28:72.04:0,72,680	1/1:3,6:9:15.05:181,15,0	0/0:13,0:14:35.09:0,35,325	0/0:22,0:22:60.05:0,60,566	0/0:7,0:7:20.97:0,21,186
chr10	73895980	.	T	TTCCC	552.85	PASS	AB=1.000;AC=9;AF=0.205;AN=44;BaseQRankSum=2.193;DP=264;FS=5.194;HRun=0;HaplotypeScore=46.2901;InbreedingCoeff=0.5596;MQ=76.95;MQ0=3;MQRankSum=0.190;QD=11.28;ReadPosRankSum=-1.554;VQSLOD=1.6054;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,7:22:21.07:506,21,0	0/0:6,0:6:9.01:0,9,135	./.	0/0:16,0:10:5.56:0,6,60	0/0:5,0:5:9.03:0,9,145	0/0:8,0:8:21.07:0,21,339	0/1:9,0:9:11.82:12,0,133	0/0:17,0:17:15.05:0,15,230	0/0:9,0:9:12.04:0,12,194	1/1:7,0:7:3.01:39,3,0	./.	./.	1/1:7,0:7:5.98:87,6,0	0/0:12,0:12:18.06:0,18,276	0/0:14,0:14:15.05:0,15,242	0/0:8,0:8:12.04:0,12,194	0/0:7,0:7:15.05:0,15,242	./.	0/0:4,0:4:3.01:0,3,48	0/0:5,0:5:12.03:0,12,170	0/0:24,0:24:32.24:0,32,519	./.	1/1:4,0:4:3.01:38,3,0	0/0:7,0:7:3:0,3,28	./.	0/0:12,0:12:24.07:0,24,366	0/0:14,0:14:18.06:0,18,291	0/0:10,0:10:12.02:0,12,155
chr10	73896060	.	CT	C	763.17	PASS	AB=0.909;AC=17;AF=0.315;AN=54;BaseQRankSum=7.015;DP=273;FS=42.762;HRun=1;HaplotypeScore=61.1573;InbreedingCoeff=0.6850;MQ=38.44;MQ0=21;MQRankSum=-5.117;QD=16.59;ReadPosRankSum=5.802;VQSLOD=1.3738;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:3.01:0,3,38	0/0:1,0:1:1.55:0,2,4	0/0:17,0:3:8.94:0,9,93	0/0:32,0:5:6.01:0,6,67	0/0:12,0:12:21.07:0,21,287	0/0:13,0:12:24.09:0,24,283	0/0:14,0:13:18.06:0,18,239	0/0:21,0:19:48.07:0,48,586	0/1:9,1:10:8.28:8,0,183	1/1:2,0:2:2.06:18,2,0	1/1:0,4:4:12.04:152,12,0	1/1:2,7:8:21.07:275,21,0	1/1:0,3:3:9.03:120,9,0	0/0:11,0:10:11.63:0,12,115	0/0:8,0:7:9.71:0,10,133	0/0:9,0:9:18.94:0,19,230	0/0:11,0:8:21.07:0,21,295	1/1:0,1:1:3.01:40,3,0	0/0:8,0:7:21.07:0,21,287	0/0:9,0:6:1.36:0,1,3	0/0:11,0:10:12.40:0,12,123	1/1:2,2:4:9.50:109,9,0	./.	1/1:3,1:3:3.78:15,4,0	1/1:1,7:8:15.05:200,15,0	0/0:16,0:14:42.13:0,42,557	0/0:13,0:13:33.51:0,34,420	0/0:9,0:7:21.07:0,21,269
chr10	73896078	.	CT	C	293.63	PASS	AB=0.929;AC=10;AF=0.217;AN=46;BaseQRankSum=5.053;DP=176;FS=28.878;HRun=1;HaplotypeScore=55.9247;InbreedingCoeff=0.5158;MQ=34.86;MQ0=11;MQRankSum=-2.188;QD=9.47;ReadPosRankSum=2.048;VQSLOD=-0.4146;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/0:10,0:10:15.05:0,15,211	0/0:9,0:8:15.06:0,15,169	0/0:11,0:10:9.69:0,10,113	0/0:13,0:11:30.09:0,30,369	0/0:7,0:7:9.75:0,10,125	0/0:1,0:1:3.01:0,3,36	1/1:4,0:4:3.88:19,4,0	1/1:3,7:8:21.07:265,21,0	1/1:0,2:2:6.02:77,6,0	0/0:9,0:8:5.61:0,6,39	0/0:7,0:6:9.92:0,10,133	0/0:5,0:5:3.90:0,4,40	0/0:11,0:8:21.07:0,21,295	0/0:1,0:1:2.94:0,3,18	0/0:7,0:6:15.05:0,15,210	0/0:6,0:5:0.89:0,1,2	0/0:6,0:6:8.72:0,9,83	1/1:1,2:3:3.48:39,3,0	./.	0/1:5,1:5:1.34:18,0,1	0/1:6,0:6:8.79:9,0,21	0/0:14,0:12:36.11:0,36,478	0/0:12,0:12:32.64:0,33,327	0/0:6,0:5:15.05:0,15,192
chr10	73897280	.	T	TC	7821.95	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-14.816;DP=592;FS=1.459;HRun=1;HaplotypeScore=55.1079;InbreedingCoeff=0.9985;MQ=75.81;MQ0=0;MQRankSum=-2.192;QD=40.95;ReadPosRankSum=2.062;VQSLOD=5.4285;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:63.21:944,63,0	0/0:8,0:8:24.08:0,24,312	0/0:12,0:12:29.45:0,29,344	0/0:11,0:11:24.03:0,24,282	0/0:26,0:26:72.23:0,72,934	0/0:32,0:32:93.27:0,93,1178	0/0:12,0:12:36.10:0,36,451	0/0:42,0:42:99:0,114,1469	0/0:28,0:28:84.23:0,84,1048	1/1:1,19:20:57.19:854,57,0	1/1:0,12:12:27.09:404,27,0	1/1:0,26:26:72.24:1079,72,0	1/1:1,16:17:45.15:675,45,0	0/0:17,0:17:51.17:0,51,662	0/0:28,0:28:84.25:0,84,1062	0/0:26,0:26:75.20:0,75,974	0/0:14,0:14:39.11:0,39,490	1/1:0,15:15:42.14:629,42,0	0/0:21,0:21:63.20:0,63,818	0/0:22,0:22:63.20:0,63,817	0/0:35,0:35:99:0,105,1362	1/1:0,18:18:54.18:809,54,0	1/1:0,21:21:60.07:899,60,0	1/1:0,13:13:39.13:585,39,0	1/1:1,23:24:63.21:944,63,0	0/0:21,0:21:63.20:0,63,818	0/0:39,0:39:99:0,111,1425	0/0:7,0:7:21.07:0,21,273
chr10	73898908	.	CAGGCCTGCACATACAT	C	616.42	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=7.943;DP=599;FS=6.753;HRun=0;HaplotypeScore=251.3420;InbreedingCoeff=0.7558;MQ=75.10;MQ0=0;MQRankSum=-0.006;QD=3.08;ReadPosRankSum=1.042;VQSLOD=1.9179;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:56.03:56,0,315	0/0:5,0:5:15.04:0,15,509	0/0:24,0:24:21.59:0,22,605	0/0:29,0:28:41.18:0,41,793	0/0:11,0:11:33.11:0,33,1057	0/0:13,0:13:33.11:0,33,935	0/0:36,0:36:91.78:0,92,2079	0/0:25,0:25:57.18:0,57,1057	0/0:14,0:14:36.12:0,36,1198	1/1:21,0:21:15.66:184,16,0	1/1:18,0:18:6.68:64,7,0	1/1:24,0:24:18.47:236,18,0	1/1:5,13:17:5.97:57,6,0	0/0:31,0:31:81.73:0,82,3533	0/0:27,0:27:78.25:0,78,3036	0/0:24,0:24:57.18:0,57,2490	0/0:29,0:29:60.20:0,60,2563	1/1:15,0:15:2.91:9,3,0	0/0:15,0:15:35.98:0,36,657	0/0:7,0:7:15.05:0,15,506	0/0:61,0:61:99:0,150,4330	0/0:6,0:6:0.47:0,0,1	1/1:12,0:12:4.92:45,5,0	1/1:22,23:45:5.44:79,5,0	1/1:12,0:12:5.23:63,5,0	0/0:20,0:20:51.17:0,51,1710	0/0:13,0:13:39.13:0,39,1557	0/0:9,0:9:27.09:0,27,1481
chr10	73898962	.	T	TGC	1306.79	PASS	AB=0.758;AC=2;AF=0.036;AN=56;BaseQRankSum=0.257;DP=584;FS=6.046;HRun=0;HaplotypeScore=83.6339;InbreedingCoeff=0.3217;MQ=62.76;MQ0=0;MQRankSum=-0.745;QD=21.78;ReadPosRankSum=0.295;VQSLOD=3.8435;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,30:40:1.13:1381,0,1	0/0:9,0:9:21.05:0,21,288	0/0:24,0:18:34.76:0,35,449	0/0:13,0:11:26.98:0,27,366	0/0:12,0:12:33.10:0,33,464	0/0:16,0:16:45.12:0,45,619	0/0:44,0:44:99:0,129,1773	0/0:30,0:30:78.13:0,78,1031	0/0:19,0:19:54.16:0,54,773	0/0:14,0:14:39.13:0,39,569	0/0:16,0:14:36.11:0,36,511	0/0:25,0:25:69.06:0,69,898	0/0:15,0:14:21.06:0,21,290	0/0:32,0:32:90.17:0,90,1321	0/0:27,0:27:78.24:0,78,1108	0/0:22,0:22:63.19:0,63,906	0/0:34,0:34:99:0,102,1481	0/0:8,0:8:2.05:0,2,286	0/0:16,0:16:42.08:0,42,557	0/0:10,0:10:27.08:0,27,378	0/0:53,0:53:99:0,150,2110	0/0:10,0:10:23.95:0,24,353	0/0:6,0:6:18.06:0,18,265	0/0:32,0:32:37.37:0,37,532	0/0:10,0:10:30.10:0,30,442	0/1:19,1:20:2.02:2,0,619	0/0:15,0:15:45.14:0,45,643	0/0:11,0:11:33.11:0,33,485
chr10	73899061	.	CTT	C	1927.53	PASS	AB=0.564;AC=19;AF=0.339;AN=56;BaseQRankSum=5.969;DP=530;FS=0.951;HRun=15;HaplotypeScore=67.8901;InbreedingCoeff=0.9027;MQ=71.55;MQ0=2;MQRankSum=-0.840;QD=11.14;ReadPosRankSum=5.996;VQSLOD=2.3512;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:5,1:22:1.14:1,0,65	0/0:6,0:7:11.49:0,11,97	0/0:27,0:17:26.72:0,27,224	0/0:20,0:12:5.44:0,5,141	0/0:20,0:22:44.62:0,45,479	0/0:17,0:19:47.54:0,48,523	0/0:20,0:23:50:0,50,536	0/0:32,0:34:71.60:0,72,799	0/0:7,0:7:12:0,12,121	1/1:7,10:17:29.82:257,30,0	1/1:2,15:17:35.76:317,36,0	1/1:3,15:20:36.86:370,37,0	1/1:2,6:8:14.97:132,15,0	0/0:13,0:13:26.99:0,27,267	0/0:22,0:22:57:0,57,594	0/0:19,0:22:53.59:0,54,637	0/0:13,0:14:35.52:0,36,372	1/1:5,8:15:26.58:216,27,0	0/0:12,0:17:28.46:0,28,239	0/0:17,0:22:55.95:0,56,522	0/0:20,0:20:39.53:0,40,474	1/1:4,12:17:26.54:223,27,0	1/1:7,11:18:32.87:283,33,0	1/1:8,15:28:7.95:256,8,0	1/1:4,7:11:8.85:79,9,0	0/0:23,0:26:43.85:0,44,452	0/0:26,0:28:70:0,70,809	0/0:11,0:14:35.05:0,35,380
chr10	73902324	.	G	GGT	194.10	PASS	AB=1.000;AC=12;AF=0.333;AN=36;BaseQRankSum=1.377;DP=206;FS=8.671;HRun=0;HaplotypeScore=39.0114;InbreedingCoeff=0.4408;MQ=50.94;MQ0=13;MQRankSum=0.394;QD=3.66;ReadPosRankSum=1.968;VQSLOD=0.2589;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:12:12.03:142,12,0	0/0:2,0:3:2.84:0,3,14	./.	./.	./.	0/1:10,0:9:0:0,0,0	0/0:6,0:6:3:0,3,32	./.	0/0:8,0:8:9.02:0,9,97	./.	./.	0/1:6,0:6:0:0,0,0	1/1:2,4:6:3.01:45,3,0	0/0:6,0:6:8.86:0,9,78	0/0:4,0:3:3.01:0,3,32	0/0:6,0:6:2.97:0,3,20	0/0:9,0:9:12.03:0,12,129	1/1:2,2:5:3.01:44,3,0	./.	0/0:6,0:6:3:0,3,32	0/0:14,0:15:6.32:0,6,47	./.	1/1:2,0:2:2.99:24,3,0	1/1:5,0:11:5.98:52,6,0	./.	./.	0/0:4,0:4:2.99:0,3,24	0/0:0,0:1:2.84:0,3,14
chr10	73903394	.	TAC	T	210.61	PASS	AB=0.885;AC=10;AF=0.208;AN=48;BaseQRankSum=3.188;DP=606;FS=10.540;HRun=0;HaplotypeScore=101.4430;InbreedingCoeff=-0.1036;MQ=64.26;MQ0=12;MQRankSum=0.920;QD=1.02;ReadPosRankSum=0.877;VQSLOD=1.0335;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:34:22.68:110,23,0	0/0:14,0:14:18.02:0,18,266	./.	./.	0/0:18,0:18:12.02:0,12,153	0/1:15,1:17:31.60:32,0,219	0/1:23,1:24:32.65:33,0,178	0/0:28,0:27:6.80:0,7,40	0/1:6,1:9:31.51:32,0,112	0/0:21,0:21:30.82:0,31,289	0/0:21,0:21:6.01:0,6,64	0/0:18,0:25:6:0,6,53	0/0:30,0:29:35.95:0,36,325	0/1:13,3:15:14.39:14,0,154	0/1:19,6:24:17.36:17,0,160	0/0:30,0:30:1.74:0,2,552	0/1:18,3:23:75.57:76,0,246	./.	0/0:14,0:14:6.01:0,6,55	0/0:10,0:10:3:0,3,25	0/1:38,0:38:4.58:5,0,338	0/0:17,0:17:9:0,9,79	0/0:12,0:20:4.65:0,5,13	0/0:26,0:37:8.63:0,9,76	./.	0/0:17,0:17:11.95:0,12,121	0/1:18,1:19:27.22:27,0,200	0/0:10,0:9:9.03:0,9,129
chr10	73904133	.	T	TC	702.37	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.499;DP=614;FS=0.772;HRun=7;HaplotypeScore=68.4590;InbreedingCoeff=0.9953;MQ=92.71;MQ0=0;MQRankSum=-0.241;QD=20.07;ReadPosRankSum=2.292;VQSLOD=3.3227;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,29:35:66.20:797,66,0	0/0:9,0:9:24.04:0,24,232	0/0:30,0:30:71.10:0,71,663	0/0:33,0:33:71.63:0,72,720	0/0:13,0:13:27.02:0,27,255	0/0:23,0:23:51.08:0,51,492	0/0:21,0:21:54.07:0,54,515	0/0:34,1:35:71.93:0,72,680	0/0:19,0:19:54.09:0,54,521	0/0:16,0:16:36.04:0,36,347	0/0:15,0:15:45.06:0,45,429	0/0:16,0:16:39.06:0,39,377	0/0:32,0:32:75:0,75,705	0/0:22,0:22:60.09:0,60,577	0/0:21,0:21:57.09:0,57,550	0/0:30,0:30:84.14:0,84,811	0/0:25,0:25:63.07:0,63,601	0/0:23,0:23:45.06:0,45,434	0/0:16,0:16:42.02:0,42,391	0/0:21,0:21:48.03:0,48,451	0/0:30,0:30:81.08:0,81,763	0/0:16,0:16:27.91:0,28,263	0/0:17,0:17:42.05:0,42,402	0/0:20,0:20:48.07:0,48,463	0/0:26,0:26:60.08:0,60,580	0/0:22,0:22:54.06:0,54,515	0/0:18,0:18:51.08:0,51,492	0/0:10,0:10:30.03:0,30,284
chr10	73904206	.	CCCA	C	5714.39	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.523;DP=602;FS=2.800;HRun=0;HaplotypeScore=94.7167;InbreedingCoeff=0.9873;MQ=97.55;MQ0=0;MQRankSum=-5.694;QD=46.84;ReadPosRankSum=1.816;VQSLOD=7.0261;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:90.31:0,90,2079	0/0:5,0:5:15.05:0,15,353	0/0:38,1:39:57.54:0,58,2284	0/0:24,0:24:63.21:0,63,1452	0/0:19,0:19:57.20:0,57,1344	0/0:24,0:24:66.23:0,66,1561	0/0:23,0:23:63.22:0,63,1484	0/0:42,0:42:99:0,126,2844	0/0:18,0:18:54.17:0,54,1216	0/0:22,0:22:66.23:0,66,1532	0/0:13,0:13:39.13:0,39,865	1/1:5,16:21:60.19:1027,60,0	1/1:0,29:29:84.29:1481,84,0	0/0:13,0:13:39.12:0,39,868	0/0:19,0:19:57.20:0,57,1348	0/0:24,0:24:72.25:0,72,1628	0/0:21,0:21:63.22:0,63,1460	1/1:0,14:14:35.67:601,36,0	0/0:6,0:6:15.05:0,15,353	0/0:12,0:12:36.12:0,36,818	0/0:42,0:42:99:0,126,2885	1/1:3,18:21:51.17:892,51,0	1/1:0,19:19:54.14:919,54,0	1/1:1,17:18:45.55:794,46,0	0/0:22,0:22:66.23:0,66,1530	0/0:30,0:30:87.30:0,87,2004	0/0:21,0:21:63.22:0,63,1458	0/0:4,0:4:12.04:0,12,281
chr10	73904268	.	GC	G	4733.50	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.644;DP=583;FS=0.366;HRun=2;HaplotypeScore=76.4720;InbreedingCoeff=0.9998;MQ=92.47;MQ0=0;MQRankSum=-6.902;QD=33.10;ReadPosRankSum=1.919;VQSLOD=4.8983;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:39:99:1263,99,0	0/0:16,0:16:48.16:0,48,719	0/0:27,0:27:71.81:0,72,902	0/0:28,0:28:74.35:0,74,1077	0/0:21,0:21:63.20:0,63,921	0/0:14,0:14:39.11:0,39,545	0/0:18,0:18:54.17:0,54,789	0/0:42,0:42:99:0,126,1815	0/0:20,0:20:60.19:0,60,879	0/0:13,0:13:39.10:0,39,544	0/0:24,0:24:66.21:0,66,969	1/1:0,21:21:63.06:759,63,0	1/1:1,13:14:42.05:495,42,0	0/0:17,0:17:48.16:0,48,719	0/0:12,0:12:36.08:0,36,496	0/0:18,0:18:54.16:0,54,767	0/0:20,0:20:60.20:0,60,896	1/1:1,13:14:36.12:467,36,0	0/0:13,0:13:39.12:0,39,566	0/0:28,0:28:84.27:0,84,1237	0/0:23,0:23:63.20:0,63,922	1/1:2,23:25:72.06:849,72,0	1/1:2,16:18:45.01:532,45,0	1/1:1,11:12:30.03:368,30,0	0/0:27,0:27:81.26:0,81,1190	0/0:26,0:26:78.24:0,78,1115	0/0:22,0:22:66.19:0,66,944	0/0:11,0:11:33.09:0,33,473
chr10	73904486	.	TC	T	2940.50	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=14.190;DP=592;FS=5.117;HRun=5;HaplotypeScore=63.9827;InbreedingCoeff=0.8775;MQ=75.56;MQ0=0;MQRankSum=-0.864;QD=23.52;ReadPosRankSum=1.343;VQSLOD=2.5796;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.18:0,66,863	0/0:8,0:8:24.08:0,24,326	0/0:10,0:10:27.05:0,27,298	0/1:15,0:14:22.99:23,0,141	0/0:28,0:28:81.22:0,81,1039	0/0:16,0:16:48.13:0,48,610	0/0:26,0:26:75.25:0,75,1014	0/0:26,0:26:75.22:0,75,965	0/0:20,0:20:57.17:0,57,745	0/0:24,0:24:63.18:0,63,804	0/0:20,0:20:54.18:0,54,733	1/1:0,15:15:39.11:441,39,0	1/1:2,30:32:72.16:802,72,0	0/0:17,0:17:48.16:0,48,651	0/0:30,0:30:90.26:0,90,1177	0/0:23,0:23:69.22:0,69,922	0/0:29,0:29:87.20:0,87,1109	0/0:12,0:12:33.08:0,33,428	0/0:17,0:17:42.13:0,42,556	0/0:32,0:32:96.29:0,96,1271	0/0:16,1:17:11.08:0,11,514	1/1:1,27:28:75.03:803,75,0	1/1:0,19:19:57.16:645,57,0	1/1:2,14:16:36.10:405,36,0	0/0:29,0:29:84.26:0,84,1114	0/0:28,0:28:78.25:0,78,1046	0/0:26,0:26:78.23:0,78,1026	0/0:6,0:6:18.06:0,18,244
chr10	73904865	.	TA	T	3515.02	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.069;DP=628;FS=1.250;HRun=9;HaplotypeScore=63.5960;InbreedingCoeff=0.9961;MQ=79.07;MQ0=0;MQRankSum=-1.304;QD=23.13;ReadPosRankSum=3.200;VQSLOD=4.5668;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:90.05:824,90,0	0/0:7,0:7:21.05:0,21,234	0/0:11,0:11:30.07:0,30,318	0/0:19,1:19:15:0,15,385	0/0:24,0:24:66.15:0,66,728	0/0:25,0:25:66.17:0,66,744	0/0:19,0:19:54.16:0,54,623	0/0:22,0:22:36.09:0,36,399	0/0:26,0:26:72.20:0,72,822	0/0:23,0:23:60.17:0,60,682	0/0:20,0:20:51.14:0,51,580	1/1:2,18:20:48.02:440,48,0	1/1:4,23:27:66.03:604,66,0	0/0:22,0:22:54.16:0,54,623	0/0:33,0:33:90.25:0,90,1022	0/0:35,0:35:94.83:0,95,1077	0/0:21,0:21:57.13:0,57,643	1/1:2,21:23:63.03:577,63,0	0/0:21,0:21:54.15:0,54,614	0/0:33,1:34:59.79:0,60,934	0/0:15,0:15:42.12:0,42,484	1/1:2,16:18:42.01:384,42,0	1/1:1,12:13:30.01:275,30,0	1/1:2,16:18:45.02:412,45,0	0/0:22,0:22:63.19:0,63,727	0/0:24,0:24:61.42:0,61,694	0/0:33,0:33:87.26:0,87,1004	0/0:19,0:19:48.11:0,48,532
chr10	73905143	.	G	GA	1519.78	PASS	AB=0.972;AC=14;AF=0.250;AN=56;BaseQRankSum=-3.084;DP=573;FS=5.570;HRun=8;HaplotypeScore=69.3309;InbreedingCoeff=0.6629;MQ=87.26;MQ0=4;MQRankSum=-0.825;QD=7.87;ReadPosRankSum=0.727;VQSLOD=1.1142;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:48.02:0,48,439	0/0:6,0:6:18:0,18,161	0/1:54,0:34:12.95:13,0,183	0/1:44,0:27:9.06:9,0,110	0/0:28,0:28:84.03:0,84,763	0/0:14,0:14:36.02:0,36,329	0/0:7,0:7:20.99:0,21,185	0/0:25,0:25:59.95:0,60,532	0/0:8,0:8:18:0,18,161	0/0:16,0:16:41.99:0,42,376	0/0:19,0:19:48.02:0,48,439	1/1:1,15:16:33.10:381,33,0	1/1:2,14:17:36:397,36,0	0/0:12,0:12:32.92:0,33,291	0/0:24,0:24:53.80:0,54,472	0/0:24,1:25:53.07:0,53,535	0/1:14,2:16:27.26:27,0,278	0/0:21,0:21:53.96:0,54,478	0/0:19,0:18:38.98:0,39,350	0/0:43,0:43:99:0,117,1066	0/0:13,0:13:30.01:0,30,274	1/1:0,11:11:33.10:376,33,0	1/1:9,12:21:30.02:324,30,0	1/1:1,5:6:15.04:173,15,0	0/0:17,0:17:45.02:0,45,412	0/0:25,0:25:62.97:0,63,565	0/0:37,0:36:99:0,105,932	0/1:7,0:7:0.30:0,0,143
chr10	73905955	.	AGT	A	2569.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=10.421;DP=771;FS=2.308;HRun=0;HaplotypeScore=87.9419;InbreedingCoeff=0.9662;MQ=67.90;MQ0=2;MQRankSum=-4.179;QD=42.13;ReadPosRankSum=1.874;VQSLOD=5.2722;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,60:61:99:2665,175,0	0/0:7,0:7:21.07:0,21,406	0/0:26,0:24:69.17:0,69,1228	0/0:20,0:19:31.44:0,31,871	0/0:24,0:24:69.22:0,69,1266	0/0:18,0:18:54.19:0,54,1043	0/0:30,0:30:87.30:0,87,1668	0/0:34,0:33:99:0,99,1878	0/0:19,0:19:57.20:0,57,1089	0/0:32,0:30:93.32:0,93,1784	0/0:23,0:23:69.24:0,69,1310	0/0:28,0:28:84.29:0,84,1619	0/0:31,0:31:93.32:0,93,1781	0/0:29,0:29:83.87:0,84,1622	0/0:34,0:34:99:0,102,1970	0/0:40,0:40:99:0,120,2309	0/0:35,0:35:99:0,105,1965	0/0:24,0:24:72.25:0,72,1378	0/0:23,0:23:66.23:0,66,1245	0/0:24,0:24:69.24:0,69,1322	0/0:41,0:40:99:0,117,2235	0/0:32,0:32:96.33:0,96,1830	0/0:25,0:25:75.26:0,75,1436	0/0:30,0:30:90.31:0,90,1726	0/0:23,0:23:69.22:0,69,1298	0/0:33,0:33:99:0,99,1880	0/0:21,0:21:60.21:0,60,1159	0/0:4,0:4:12.04:0,12,232
chr10	73906618	.	TCA	T	4360.88	PASS	AB=0.988;AC=21;AF=0.375;AN=56;BaseQRankSum=16.875;DP=1006;FS=0.652;HRun=0;HaplotypeScore=155.5974;InbreedingCoeff=0.8799;MQ=62.91;MQ0=15;MQRankSum=1.040;QD=10.33;ReadPosRankSum=5.465;VQSLOD=4.6572;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,40:52:78.24:940,78,0	0/0:19,0:19:51.16:0,51,786	0/0:56,0:22:18.18:0,18,216	0/1:79,1:36:9.93:10,0,289	0/0:35,2:37:10.44:0,10,1061	0/0:32,1:33:36.05:0,36,1034	0/0:29,1:29:17.28:0,17,742	0/0:29,0:29:54.16:0,54,802	0/0:36,1:37:15.09:0,15,1173	1/1:8,36:44:79.21:1057,79,0	1/1:8,24:32:48.17:610,48,0	1/1:9,0:32:39.77:196,40,0	1/1:11,1:42:56.32:331,56,0	0/0:43,0:43:99:0,102,1433	0/0:49,1:50:87.19:0,87,1785	0/0:44,0:44:99:0,99,1577	0/0:24,0:24:60.18:0,60,913	1/1:11,0:31:15.29:195,15,0	0/0:23,1:22:8.89:0,9,562	0/0:28,0:29:77.98:0,78,1072	0/0:49,1:50:62.86:0,63,1353	1/1:7,0:29:39.71:195,40,0	1/1:1,0:21:31.25:154,31,0	1/1:9,0:23:28.41:140,28,0	1/1:4,28:32:4.73:532,5,0	0/0:36,2:38:8.78:0,9,1030	0/0:29,1:30:24.01:0,24,837	0/0:11,0:11:24.08:0,24,378
chr10	73908765	.	TATAAAATATAATAC	T	1877.36	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.659;DP=697;FS=3.564;HRun=0;HaplotypeScore=261.6867;InbreedingCoeff=0.9988;MQ=79.05;MQ0=0;MQRankSum=-5.872;QD=93.87;ReadPosRankSum=0.760;VQSLOD=3.0973;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:45.15:1972,45,0	0/0:12,0:12:36.12:0,36,2334	0/0:25,0:25:69.16:0,69,4017	0/0:12,0:12:27.09:0,27,1412	0/0:36,0:36:99:0,108,7249	0/0:30,0:30:90.31:0,90,5837	0/0:20,0:20:60.21:0,60,4173	0/0:34,0:34:99:0,102,6400	0/0:20,0:20:60.21:0,60,3774	0/0:27,0:27:81.28:0,81,5367	0/0:36,0:36:99:0,108,7100	0/0:30,0:30:90.31:0,90,5917	0/0:31,0:31:93.29:0,93,5738	0/0:26,0:26:78.25:0,78,5305	0/0:26,0:26:78.27:0,78,5295	0/0:25,0:25:75.26:0,75,4755	0/0:24,0:24:72.25:0,72,4929	0/0:22,0:22:66.23:0,66,3829	0/0:31,0:31:93.32:0,93,6138	0/0:24,0:24:72.25:0,72,4381	0/0:19,0:19:54.19:0,54,3556	0/0:18,0:18:54.19:0,54,3478	0/0:22,0:22:66.21:0,66,4089	0/0:20,0:20:60.21:0,60,4029	0/0:23,0:23:69.24:0,69,4689	0/0:33,0:33:96.33:0,96,6296	0/0:33,0:33:99:0,99,6284	0/0:18,0:18:54.19:0,54,3887
chr10	73910556	.	GT	G	533.38	PASS	AB=0.900;AC=3;AF=0.054;AN=56;BaseQRankSum=5.159;DP=566;FS=0.000;HRun=9;HaplotypeScore=56.2699;InbreedingCoeff=0.6051;MQ=75.30;MQ0=0;MQRankSum=-1.970;QD=13.01;ReadPosRankSum=3.148;VQSLOD=3.1330;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,29:32:40.40:624,40,0	0/0:8,0:8:21.06:0,21,242	0/0:15,0:14:31.58:0,32,320	0/1:8,1:9:12.64:13,0,142	0/0:27,0:27:75.21:0,75,857	0/0:19,0:19:45.13:0,45,519	0/0:10,1:12:5.47:0,5,296	0/0:31,1:33:75.03:0,75,821	0/0:16,0:16:45.10:0,45,498	0/0:24,0:24:60.17:0,60,686	0/0:15,0:15:42.12:0,42,485	0/0:24,0:24:63.13:0,63,688	0/0:22,0:23:63:0,63,696	0/0:22,0:23:60.01:0,60,672	0/0:29,0:30:72.01:0,72,790	0/0:21,1:21:33.90:0,34,617	0/0:21,0:22:50.97:0,51,558	0/0:1,0:12:25.57:0,26,130	0/0:10,0:10:24.07:0,24,277	0/0:28,1:30:53.61:0,54,853	0/0:20,0:21:56.98:0,57,626	0/0:10,0:10:30.09:0,30,346	0/0:17,0:17:48.14:0,48,549	0/0:22,0:22:54.14:0,54,612	0/0:29,0:29:54.77:0,55,814	0/0:22,0:22:54.15:0,54,615	0/0:28,0:28:60.15:0,60,672	0/0:11,0:11:33.10:0,33,381
chr10	73913484	.	TA	T	461.89	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=6.627;DP=510;FS=1.759;HRun=8;HaplotypeScore=48.7318;InbreedingCoeff=0.5330;MQ=70.99;MQ0=1;MQRankSum=0.003;QD=13.20;ReadPosRankSum=0.184;VQSLOD=2.6966;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:57.09:550,57,0	0/0:4,0:4:12.04:0,12,145	0/1:11,0:9:16.15:16,0,91	0/0:15,0:14:3.78:0,4,111	0/0:19,0:19:51.16:0,51,616	0/0:17,0:17:51.16:0,51,616	0/0:11,0:11:21.06:0,21,254	0/0:22,0:21:54.10:0,54,624	0/0:10,0:10:30.09:0,30,362	0/0:25,0:25:66.20:0,66,795	0/0:23,0:23:69.20:0,69,821	0/0:18,0:18:51.14:0,51,605	0/0:17,0:17:42.12:0,42,496	0/0:15,0:15:45.11:0,45,520	0/0:17,0:17:48.12:0,48,558	0/0:26,0:26:69.20:0,69,821	0/0:26,0:26:72.20:0,72,857	0/0:17,0:17:45.12:0,45,530	0/0:25,0:25:63.18:0,63,748	0/0:19,0:19:51.16:0,51,616	0/0:3,0:3:6.02:0,6,72	0/0:14,0:14:42.13:0,42,507	0/0:24,0:24:66.20:0,66,797	0/0:6,0:6:18.06:0,18,217	0/0:37,0:37:99:0,108,1280	0/0:24,0:24:69.21:0,69,832	0/0:25,0:25:63.18:0,63,748	0/0:15,0:15:42.13:0,42,503
chr10	73918630	.	CT	C	3706.31	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.846;DP=664;FS=0.740;HRun=8;HaplotypeScore=63.8558;InbreedingCoeff=0.9813;MQ=73.19;MQ0=0;MQRankSum=-0.760;QD=24.87;ReadPosRankSum=3.217;VQSLOD=4.4360;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:69.10:666,69,0	0/0:9,0:9:15.05:0,15,181	0/0:22,0:21:47.70:0,48,518	0/0:12,0:12:11.15:0,11,201	0/0:29,0:29:78.24:0,78,941	0/0:40,0:40:99:0,108,1279	0/0:20,0:20:51.13:0,51,594	0/0:30,0:30:72.21:0,72,861	0/0:17,0:17:51.13:0,51,585	0/0:31,0:31:84.24:0,84,988	0/0:24,1:25:46.25:0,46,840	1/1:4,24:28:66.10:637,66,0	1/1:0,25:25:69.11:666,69,0	0/0:20,0:20:48.15:0,48,580	0/0:37,0:37:99:0,108,1305	0/0:20,0:20:45.78:0,46,608	0/0:21,0:21:60.18:0,60,724	0/0:15,1:16:13.15:0,13,442	0/0:17,0:17:45.14:0,45,544	0/0:32,0:32:93.27:0,93,1102	0/0:16,0:19:43.35:0,43,488	1/1:2,32:34:87.13:838,87,0	1/1:2,16:18:48.08:464,48,0	1/1:0,16:16:45.07:435,45,0	0/0:23,0:24:66.05:0,66,749	0/0:25,0:25:72.16:0,72,835	0/0:44,0:43:99:0,111,1316	0/0:5,0:5:15.05:0,15,180
chr10	73919686	.	T	TC	864.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.235;DP=713;FS=0.000;HRun=0;HaplotypeScore=66.6103;InbreedingCoeff=0.9999;MQ=82.69;MQ0=0;MQRankSum=-2.456;QD=37.59;ReadPosRankSum=1.507;VQSLOD=3.7739;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1530	0/0:13,0:13:39.13:0,39,545	0/0:20,0:20:57.19:0,57,777	0/0:23,0:23:66.05:0,66,849	0/0:27,0:27:72.24:0,72,1007	0/0:39,0:39:99:0,114,1526	0/0:29,0:29:81.25:0,81,1112	0/0:40,0:40:99:0,117,1636	0/0:23,0:23:66.22:0,66,921	0/0:26,0:26:78.26:0,78,1078	0/0:15,0:15:45.15:0,45,628	0/0:21,0:21:63.21:0,63,880	0/0:34,0:34:96.30:0,96,1314	0/0:24,0:24:72.23:0,72,990	0/0:21,0:21:63.21:0,63,881	0/0:22,0:22:63.21:0,63,881	0/0:26,0:26:78.26:0,78,1090	1/1:0,23:23:60.20:959,60,0	0/0:21,0:21:60.20:0,60,836	0/0:24,0:24:66.21:0,66,907	0/0:32,0:32:96.32:0,96,1343	0/0:20,0:20:57.19:0,57,795	0/0:21,0:21:63.18:0,63,842	0/0:16,0:16:45.15:0,45,629	0/0:34,0:34:99:0,102,1426	0/0:30,0:30:90.29:0,90,1244	0/0:38,0:38:99:0,108,1510	0/0:14,0:14:42.14:0,42,587
chr10	73920794	.	GA	G	2382.06	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.809;DP=762;FS=4.043;HRun=4;HaplotypeScore=77.0754;InbreedingCoeff=0.9940;MQ=85.99;MQ0=0;MQRankSum=-0.426;QD=29.41;ReadPosRankSum=2.587;VQSLOD=3.8318;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,150,2029	0/0:8,0:8:24.08:0,24,336	0/0:28,0:28:57.19:0,57,897	0/0:23,0:23:60.10:0,60,738	0/0:31,0:31:87.28:0,87,1201	0/0:27,0:27:81.24:0,81,1098	0/0:27,0:27:81.22:0,81,1098	0/0:31,0:31:87.27:0,87,1175	0/0:33,0:33:93.30:0,93,1276	1/1:3,26:29:42.20:905,42,0	1/1:0,15:15:36.11:432,36,0	0/0:30,0:30:87.27:0,87,1187	0/0:35,0:35:99:0,99,1353	0/0:23,0:23:66.21:0,66,893	0/0:30,0:30:84.27:0,84,1160	0/0:25,0:25:75.25:0,75,1049	0/0:33,0:33:99:0,99,1333	0/0:22,0:22:63.20:0,63,865	0/0:26,0:26:75.23:0,75,1017	0/0:29,0:29:84.27:0,84,1159	0/0:20,0:20:57.18:0,57,781	0/0:28,0:28:84.13:0,84,1079	0/0:20,0:20:60.19:0,60,822	0/0:30,0:30:90.27:0,90,1212	1/1:3,34:37:99:1188,99,0	0/0:25,2:27:15.50:0,15,893	0/0:33,0:33:96.32:0,96,1344	0/0:11,0:11:33.10:0,33,445
chr10	73921040	.	TAG	T	9859.38	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=21.059;DP=831;FS=9.138;HRun=0;HaplotypeScore=131.8104;InbreedingCoeff=0.9999;MQ=87.60;MQ0=0;MQRankSum=-7.258;QD=34.35;ReadPosRankSum=3.328;VQSLOD=7.0311;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,35:39:96.25:1259,96,0	0/0:13,0:13:33.11:0,33,573	0/0:35,0:35:82.62:0,83,1491	0/0:25,0:25:66.22:0,66,1099	0/0:35,0:35:87.28:0,87,1508	0/0:28,0:28:84.27:0,84,1454	0/0:28,0:28:78.25:0,78,1356	0/0:48,0:48:99:0,129,2284	0/0:29,0:29:84.29:0,84,1471	1/1:5,29:34:87.29:1177,87,0	1/1:2,16:18:39.09:505,39,0	1/1:2,35:37:96.23:1256,96,0	1/1:3,34:37:99:1338,99,0	0/0:24,0:24:72.22:0,72,1205	0/0:53,0:53:99:0,147,2536	0/0:49,0:49:99:0,144,2534	0/0:27,0:26:78.27:0,78,1384	1/1:2,14:16:42.14:567,42,0	0/0:24,0:24:69.24:0,69,1220	0/0:39,0:39:99:0,105,1834	0/0:22,0:22:66.23:0,66,1164	1/1:2,30:32:93.23:1206,93,0	1/1:2,23:25:66.22:890,66,0	1/1:1,24:25:63.21:852,63,0	1/1:2,22:24:60.20:811,60,0	0/0:28,1:29:46.69:0,47,1425	0/0:26,0:26:75.26:0,75,1318	0/0:10,0:10:30.10:0,30,531
chr10	73921611	.	GC	G	6372.08	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=16.057;DP=778;FS=2.668;HRun=4;HaplotypeScore=87.0085;InbreedingCoeff=0.9999;MQ=87.32;MQ0=1;MQRankSum=-7.035;QD=32.35;ReadPosRankSum=1.181;VQSLOD=5.3609;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:99:1224,102,0	0/0:11,0:11:33.11:0,33,462	0/0:28,0:28:78.14:0,78,1014	0/0:25,0:25:65.80:0,66,847	0/0:22,0:22:66.22:0,66,923	0/0:20,0:20:60.20:0,60,840	0/0:32,0:32:90.29:0,90,1240	0/0:36,0:36:99:0,99,1371	0/0:26,0:26:78.25:0,78,1075	0/0:34,0:34:96.30:0,96,1301	0/0:12,0:12:36.12:0,36,500	1/1:1,29:30:75.23:900,75,0	1/1:0,32:32:87.27:1044,87,0	0/0:28,0:28:84.27:0,84,1160	0/0:33,0:32:99:0,99,1371	0/0:35,0:35:99:0,99,1386	0/0:21,0:21:63.17:0,63,845	0/0:27,0:27:81.27:0,81,1134	0/0:25,0:25:72.24:0,72,1007	0/0:24,0:24:66.21:0,66,907	0/0:35,0:34:99:0,102,1411	1/1:0,29:29:75.23:900,75,0	1/1:0,20:20:54.17:648,54,0	1/1:1,48:49:99:1656,138,0	0/0:32,0:32:96.30:0,96,1311	0/0:31,0:31:90.29:0,90,1246	0/0:32,0:32:93.30:0,93,1281	0/0:12,0:11:36.12:0,36,504
chr10	73922318	.	GTGTA	G	645.53	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.075;DP=826;FS=7.642;HRun=0;HaplotypeScore=133.6962;InbreedingCoeff=0.9942;MQ=79.75;MQ0=0;MQRankSum=-3.019;QD=35.86;ReadPosRankSum=0.506;VQSLOD=3.2510;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,2647	0/0:20,0:20:60.21:0,60,1620	0/0:24,0:24:58.70:0,59,1300	0/0:15,0:16:24.87:0,25,850	0/0:22,0:22:63.22:0,63,1679	0/0:21,0:21:60.21:0,60,1611	0/0:34,0:34:93.32:0,93,2463	0/0:32,0:32:87.28:0,87,2183	0/0:32,0:32:96.33:0,96,2559	0/0:35,0:35:99:0,102,2650	0/0:25,0:25:66.21:0,66,1714	0/0:50,0:50:99:0,138,3668	0/0:42,0:42:99:0,126,3349	0/0:33,0:33:99:0,99,2624	0/0:54,0:54:99:0,156,4077	0/0:56,0:56:99:0,160,4280	0/0:24,0:24:72.25:0,72,1918	1/1:2,16:18:39.13:740,39,0	0/0:16,0:16:45.15:0,45,1173	0/0:26,0:26:75.26:0,75,1952	0/0:26,0:26:75.24:0,75,1916	0/0:25,0:25:72.23:0,72,1864	0/0:18,0:18:54.19:0,54,1451	0/0:28,0:28:84.27:0,84,2187	0/0:38,0:38:99:0,114,3030	0/0:35,0:35:99:0,102,2751	0/0:32,0:32:96.33:0,96,2591	0/0:8,0:8:21.07:0,21,519
chr10	73925068	.	C	CA	271.26	PASS	AB=0.821;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.613;DP=620;FS=0.000;HRun=15;HaplotypeScore=81.3767;InbreedingCoeff=0.1826;MQ=51.01;MQ0=22;MQRankSum=0.280;QD=2.15;ReadPosRankSum=-1.664;VQSLOD=-0.7456;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,25:45:3.31:299,0,3	0/0:6,0:6:8.78:0,9,54	1/1:13,0:4:5.60:18,6,0	0/1:9,0:4:5.20:15,0,5	0/0:27,0:32:48.58:0,49,281	0/0:11,0:12:16.63:0,17,95	0/0:19,1:22:2.18:0,2,112	0/0:28,2:33:0.89:0,1,202	0/0:23,0:23:26.24:0,26,153	0/0:21,0:23:30.24:0,30,173	0/0:14,0:14:14.41:0,14,89	0/0:21,1:21:5.83:0,6,133	0/0:21,0:21:19.36:0,19,111	0/0:21,0:21:34.79:0,35,188	0/0:20,0:19:29.93:0,30,171	0/0:22,0:23:15.45:0,15,172	0/0:35,1:33:13.66:0,14,177	0/0:32,1:28:38.26:0,38,226	0/1:14,2:16:38.59:39,0,75	0/0:13,0:14:14.49:0,14,89	0/1:9,4:11:17.21:17,0,26	0/1:21,2:23:1.21:1,0,207	0/0:20,0:20:14.67:0,15,102	0/0:21,0:21:19.56:0,20,194	0/0:20,0:21:2.27:0,2,113	0/0:29,1:31:26.55:0,27,267	0/0:22,0:21:24.19:0,24,136	0/0:15,0:14:24.61:0,25,137
chr10	73926529	.	AAAAC	A	5998.33	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.526;DP=740;FS=5.200;HRun=0;HaplotypeScore=138.2440;InbreedingCoeff=0.9885;MQ=66.26;MQ0=5;MQRankSum=-5.633;QD=30.14;ReadPosRankSum=4.501;VQSLOD=4.4584;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:69.19:0,69,1507	0/0:7,0:7:12.04:0,12,288	0/0:33,0:24:18.06:0,18,352	0/0:27,0:21:18.02:0,18,365	0/0:29,0:29:75.25:0,75,1751	0/0:20,0:20:42.14:0,42,1006	0/0:28,0:28:48.16:0,48,1153	0/0:36,0:36:51.16:0,51,1112	0/0:30,0:30:54.18:0,54,1223	1/1:5,20:24:63.21:1009,63,0	1/1:8,15:23:42.14:672,42,0	1/1:11,18:29:60.20:960,60,0	1/1:19,20:39:75.24:1139,75,0	0/0:39,1:40:30.23:0,30,1666	0/0:38,0:38:63.22:0,63,1461	0/0:41,1:42:45.26:0,45,1916	0/0:29,0:29:75.26:0,75,1737	1/1:4,5:9:18.06:288,18,0	0/0:31,0:31:51.17:0,51,1183	0/0:18,0:18:45.15:0,45,1023	0/0:27,0:27:60.21:0,60,1436	1/1:9,12:21:39.13:609,39,0	1/1:10,8:18:27.09:432,27,0	1/1:7,12:19:30.10:480,30,0	1/1:7,9:15:30.07:408,30,0	0/0:24,1:25:15.18:0,15,1390	0/0:30,0:30:63.20:0,63,1374	0/0:14,0:14:33.11:0,33,778
chr10	73926578	.	GCCTTCCCA	G	10173.35	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=16.473;DP=733;FS=1.156;HRun=0;HaplotypeScore=211.2909;InbreedingCoeff=0.9558;MQ=66.00;MQ0=0;MQRankSum=-16.065;QD=42.39;ReadPosRankSum=1.676;VQSLOD=4.6275;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,19:33:33.11:864,33,0	0/0:10,0:10:30.10:0,30,1259	0/0:26,0:23:31.63:0,32,1479	0/0:24,0:22:30.02:0,30,936	0/0:31,0:31:72.25:0,72,2924	0/0:25,0:25:66.23:0,66,2750	0/0:26,0:26:60.21:0,60,2413	0/0:30,0:30:54.19:0,54,2056	0/0:26,0:26:66.23:0,66,2727	1/1:10,24:34:72.23:1787,72,0	1/1:9,13:22:33.07:806,33,0	1/1:8,21:29:60.21:1527,60,0	1/1:11,22:33:66.23:1709,66,0	0/0:36,0:36:93.32:0,93,3860	0/0:28,0:28:72.25:0,72,2797	0/0:40,0:40:87.30:0,87,3617	0/0:36,0:36:96.27:0,96,3674	1/1:6,5:11:18.04:417,18,0	0/0:26,0:26:57.20:0,57,2237	0/0:25,0:25:63.22:0,63,2546	0/0:24,0:24:57.20:0,57,2347	1/1:6,18:24:54.17:1315,54,0	1/1:5,14:19:33.03:734,33,0	1/1:12,3:15:6.02:151,6,0	1/1:4,16:20:33.11:864,33,0	0/0:31,1:32:2.70:0,3,3060	0/0:31,0:31:78.27:0,78,3206	0/0:17,0:17:45.15:0,45,1698
chr10	73927381	.	T	TC	2753.90	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-11.152;DP=859;FS=7.078;HRun=1;HaplotypeScore=79.2198;InbreedingCoeff=0.9988;MQ=87.66;MQ0=0;MQRankSum=-7.646;QD=38.25;ReadPosRankSum=2.869;VQSLOD=4.2730;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,52:55:99:2246,151,0	0/0:8,0:8:24.08:0,24,308	0/0:32,0:32:87.23:0,87,1075	0/0:28,0:28:71.35:0,71,927	0/0:32,0:32:93.30:0,93,1207	0/0:25,0:25:72.23:0,72,934	0/0:14,0:14:42.14:0,42,545	0/0:36,0:36:99:0,105,1342	0/0:35,0:35:99:0,105,1316	0/0:42,0:42:99:0,123,1579	0/0:13,0:13:39.13:0,39,506	0/0:33,0:33:96.29:0,96,1218	0/0:39,0:39:99:0,117,1505	0/0:28,0:28:81.22:0,81,1030	0/0:46,0:46:99:0,132,1684	0/0:30,0:30:87.27:0,87,1116	0/0:23,0:23:69.17:0,69,847	1/1:0,17:17:42.14:629,42,0	0/0:30,0:30:90.28:0,90,1154	0/0:34,0:34:99:0,102,1323	0/0:43,0:43:99:0,126,1624	0/0:33,0:33:96.28:0,96,1218	0/0:28,0:28:83.62:0,84,1044	0/0:35,0:35:99:0,102,1309	0/0:31,0:31:93.29:0,93,1193	0/0:35,0:34:99:0,102,1301	0/0:42,0:42:99:0,123,1592	0/0:12,0:12:36.12:0,36,467
chr10	73928020	.	GCACAGGCGCGCCCCCTCACGGACTGCTCACCA	G	496.46	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.728;DP=626;FS=3.804;HRun=0;HaplotypeScore=482.8814;InbreedingCoeff=0.8267;MQ=71.39;MQ0=0;MQRankSum=-3.113;QD=12.73;ReadPosRankSum=-1.523;VQSLOD=0.3997;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:35.65:360,36,0	0/0:7,0:7:12.04:0,12,1121	0/0:12,0:12:16.30:0,16,388	0/0:9,0:9:18.05:0,18,596	0/0:7,0:7:12.04:0,12,1718	0/0:13,0:13:25.33:0,25,1891	0/0:33,0:33:78.13:0,78,5358	0/0:12,0:12:12.03:0,12,337	0/0:25,0:25:44.97:0,45,4000	0/0:21,0:21:35.96:0,36,2175	0/0:13,0:13:17.30:0,17,2342	0/0:45,0:45:84.08:0,84,7526	0/0:36,0:36:72.19:0,72,6865	0/0:41,0:41:87.16:0,87,8014	0/0:28,0:28:57.18:0,57,5026	0/0:24,0:24:48.04:0,48,4630	0/0:38,0:38:78.13:0,78,7895	1/1:6,8:14:3.01:245,3,0	0/0:20,0:20:30.01:0,30,2012	0/0:10,0:10:12.04:0,12,989	0/0:61,0:61:99:0,114,6936	0/0:25,0:25:45.07:0,45,3109	0/0:14,0:14:23.28:0,23,2177	0/0:27,0:27:45.05:0,45,3894	0/0:14,0:14:30.09:0,30,2212	0/0:16,0:16:39.10:0,39,3058	0/0:23,0:23:41.68:0,42,3401	0/0:13,0:12:24.08:0,24,3198
chr10	73928357	.	GTTT	G	5154.22	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=6.541;DP=590;FS=3.704;HRun=12;HaplotypeScore=108.3640;InbreedingCoeff=0.9741;MQ=68.79;MQ0=1;MQRankSum=-2.654;QD=27.56;ReadPosRankSum=2.385;VQSLOD=4.2412;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:24:61.05:0,61,500	0/0:4,0:6:15.02:0,15,197	0/0:15,0:17:35.75:0,36,496	0/0:9,0:8:5.28:0,5,136	0/0:25,0:26:70.92:0,71,1214	0/0:17,0:18:45.12:0,45,790	0/0:17,0:19:45.12:0,45,785	0/0:21,0:25:57.13:0,57,847	0/0:21,0:21:57.18:0,57,1050	1/1:3,23:26:69.17:834,69,0	1/1:4,7:11:21.02:265,21,0	1/1:8,14:22:63.15:740,63,0	1/1:6,21:27:72.14:886,72,0	0/0:35,0:36:98.30:0,98,1693	0/0:18,0:22:60.16:0,60,1039	0/0:25,0:27:73.78:0,74,1331	0/0:17,0:18:54.08:0,54,950	0/0:2,0:22:16.44:0,16,39	0/0:14,0:14:30.09:0,30,526	0/0:15,0:16:39.06:0,39,541	0/0:14,0:15:30.10:0,30,575	1/1:4,20:24:56.64:637,57,0	1/1:1,12:14:25.45:338,25,0	1/1:4,27:31:53.67:653,54,0	1/1:4,28:32:64.96:800,65,0	0/0:26,1:28:34.27:0,34,1017	0/0:23,0:25:64.06:0,64,1167	0/0:10,0:12:24:0,24,359
chr10	73928411	.	AGGTGGCTG	A	6709.67	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.942;DP=566;FS=10.481;HRun=0;HaplotypeScore=167.9594;InbreedingCoeff=0.9812;MQ=72.29;MQ0=1;MQRankSum=-13.503;QD=36.47;ReadPosRankSum=1.539;VQSLOD=3.7914;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:81.28:0,81,3278	0/0:8,0:8:24.08:0,24,938	0/0:13,0:13:21.54:0,22,759	0/0:17,0:17:18.85:0,19,834	0/0:17,0:17:27.09:0,27,1045	0/0:17,0:17:39.13:0,39,1657	0/0:22,0:22:57.16:0,57,2292	0/0:31,0:31:75.25:0,75,2778	0/0:15,0:15:42.13:0,42,1682	1/1:11,9:20:27.09:715,27,0	1/1:2,17:19:25.92:345,26,0	1/1:2,24:26:75.13:1663,75,0	1/1:7,22:29:60.16:1383,60,0	0/0:27,0:27:75.26:0,75,2899	0/0:16,0:16:33.11:0,33,1403	0/0:16,0:16:48.16:0,48,1966	0/0:20,0:20:51.18:0,51,2110	0/0:21,0:20:48.16:0,48,1954	0/0:9,0:9:9.03:0,9,349	0/0:19,0:19:45.14:0,45,1702	0/0:21,0:21:48.16:0,48,1998	1/1:8,8:16:20.99:396,21,0	1/1:10,5:15:11.58:203,12,0	1/1:10,22:32:45.06:953,45,0	1/1:11,16:27:50.93:1051,51,0	0/0:22,0:22:45.14:0,45,1756	0/0:21,0:21:51.13:0,51,1880	0/0:14,0:14:33.11:0,33,1344
chr10	73932577	.	T	TGATAGATA	6336.66	PASS	AC=34;AF=0.708;AN=48;BaseQRankSum=-3.896;DP=682;FS=0.690;HRun=0;HaplotypeScore=196.2799;InbreedingCoeff=0.8275;MQ=60.32;MQ0=8;MQRankSum=-0.145;QD=14.94;ReadPosRankSum=-0.570;VQSLOD=4.0709;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:30.08:0,30,585	1/1:8,0:8:6.02:152,6,0	./.	./.	1/1:23,0:23:12.04:286,12,0	1/1:23,0:24:35.58:665,36,0	./.	./.	1/1:17,0:27:20.93:166,21,0	1/1:26,0:27:30.08:647,30,0	1/1:24,0:25:12.02:341,12,0	0/0:17,0:19:9.03:0,9,179	0/0:27,0:27:15.05:0,15,299	1/1:19,0:23:3.01:78,3,0	1/1:20,14:37:18.06:693,18,0	1/1:25,8:35:9.03:361,9,0	1/1:23,0:24:9.01:264,9,0	0/0:16,0:18:5.75:0,6,60	1/1:12,0:12:6.02:95,6,0	1/1:28,0:28:16.56:432,17,0	1/1:15,0:15:9.03:156,9,0	0/0:21,0:21:30.10:0,30,624	0/0:23,0:23:20.94:0,21,474	0/0:13,0:16:9.02:0,9,121	1/1:24,0:27:30.06:602,30,0	1/1:22,0:32:35.95:304,36,0	1/1:25,12:38:27.09:997,27,0	1/1:5,0:10:11.97:97,12,0
chr10	73932645	.	G	GA	5523.78	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.870;DP=718;FS=0.000;HRun=6;HaplotypeScore=157.4219;InbreedingCoeff=0.9989;MQ=64.67;MQ0=6;MQRankSum=-2.314;QD=27.08;ReadPosRankSum=0.867;VQSLOD=2.6626;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:43.24:0,43,446	0/0:13,0:13:27.05:0,27,275	0/0:21,0:17:42.08:0,42,423	0/0:13,0:9:21.04:0,21,213	0/0:30,0:29:56.40:0,56,579	0/0:29,0:29:52.04:0,52,517	0/0:15,0:14:42.10:0,42,429	0/0:41,0:40:99:0,111,1121	0/0:28,0:26:62.96:0,63,636	1/1:7,22:29:72.03:906,72,0	1/1:11,18:29:30.12:564,30,0	1/1:5,14:19:39.07:473,39,0	1/1:3,21:24:66.18:813,66,0	0/0:29,0:27:32.88:0,33,443	0/0:34,0:34:72.14:0,72,726	0/0:29,0:29:63.14:0,63,640	0/0:27,0:27:56.26:0,56,580	0/0:23,0:22:56.12:0,56,571	0/0:14,0:14:33.07:0,33,337	0/0:23,0:23:47.26:0,47,481	0/0:21,0:21:53.26:0,53,549	1/1:2,20:22:60.15:737,60,0	1/1:3,19:22:60.19:755,60,0	1/1:3,18:21:30.57:378,31,0	1/1:12,26:38:80.61:898,81,0	0/0:34,1:35:55.46:0,55,880	0/0:38,0:37:84.16:0,84,846	0/0:21,0:21:57.10:0,57,573
chr10	73932707	.	TG	T	1062.45	PASS	AB=0.785;AC=4;AF=0.071;AN=56;BaseQRankSum=4.762;DP=777;FS=2.059;HRun=2;HaplotypeScore=123.8096;InbreedingCoeff=-0.0785;MQ=52.66;MQ0=25;MQRankSum=-0.781;QD=8.24;ReadPosRankSum=-1.490;VQSLOD=0.6241;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:13.84:0,14,155	0/0:12,0:12:36.12:0,36,526	0/0:33,0:9:17.18:0,17,206	0/0:34,0:14:24.73:0,25,430	0/0:22,0:22:63.19:0,63,876	0/0:31,0:31:93.30:0,93,1334	0/0:15,0:14:42.14:0,42,611	0/0:41,0:35:99:0,105,1451	0/0:28,0:28:75.24:0,75,1086	0/0:43,0:42:99:0,120,1673	0/0:15,0:15:27.02:0,27,388	0/1:20,10:30:99:199,0,686	0/1:25,14:39:99:437,0,660	0/0:26,0:26:78.24:0,78,1120	0/0:39,0:39:99:0,117,1717	0/0:29,0:29:87.24:0,87,1247	0/0:19,0:19:48.16:0,48,687	0/0:30,0:30:85.79:0,86,934	0/0:19,0:12:36.12:0,36,522	0/0:24,0:24:72.24:0,72,1055	0/0:33,0:33:94.54:0,95,1333	0/1:16,18:33:99:521,0,258	0/1:26,0:26:12.86:13,0,292	0/0:24,0:23:11.98:0,12,215	0/0:30,0:30:66.69:0,67,939	0/0:22,0:22:65.25:0,65,930	0/0:22,0:22:63.21:0,63,924	0/0:25,0:24:67.34:0,67,864
chr10	73932708	.	G	GGAT	1546.31	PASS	AB=0.870;AC=6;AF=0.107;AN=56;BaseQRankSum=5.531;DP=781;FS=0.000;HRun=0;HaplotypeScore=154.7930;InbreedingCoeff=-0.1260;MQ=53.42;MQ0=26;MQRankSum=0.613;QD=8.31;ReadPosRankSum=0.406;VQSLOD=3.1494;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:24.29:160,0,24	0/0:12,0:12:36.12:0,36,550	0/0:34,0:10:9.26:0,9,131	0/0:36,0:15:23.96:0,24,459	0/0:22,0:22:63.19:0,63,910	0/0:32,0:32:90.31:0,90,1396	0/0:15,0:14:39.13:0,39,604	0/0:42,0:36:99:0,99,1398	0/0:27,0:27:75.23:0,75,1122	0/0:42,0:41:91.59:0,92,1334	0/0:15,0:15:24.04:0,24,325	0/1:30,0:30:99:202,0,508	0/1:37,2:39:99:568,0,488	0/0:26,0:26:78.24:0,78,1171	0/0:39,0:39:99:0,111,1721	0/0:29,0:29:87.28:0,87,1314	0/0:18,0:18:48.16:0,48,714	0/0:31,0:31:5.22:0,5,633	0/0:19,0:12:33.11:0,33,496	0/0:24,0:24:72.24:0,72,1111	0/0:33,0:33:96.28:0,96,1376	0/1:34,0:33:99:597,0,201	0/1:12,13:26:16.28:16,0,205	0/1:9,14:22:99:126,0,167	0/0:30,0:30:46.55:0,47,781	0/0:23,0:23:65.03:0,65,985	0/0:21,0:21:63.21:0,63,980	0/0:25,0:24:48.27:0,48,814
chr10	73932709	.	G	GATGA	769.21	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=5.356;DP=780;FS=0.000;HRun=0;HaplotypeScore=166.7345;InbreedingCoeff=0.1131;MQ=54.39;MQ0=26;MQRankSum=-1.789;QD=4.69;ReadPosRankSum=1.890;VQSLOD=2.5064;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:36:1.55:386,2,0	0/0:12,0:12:36.01:0,36,458	0/0:35,0:11:12.11:0,12,112	0/0:37,0:16:37.02:0,37,337	0/0:22,0:22:62.73:0,63,696	0/0:31,0:31:93.04:0,93,1268	0/0:16,0:15:39.06:0,39,537	0/0:40,0:34:99:0,102,872	0/0:27,0:27:77.96:0,78,1052	0/0:42,0:41:10.72:0,11,600	0/0:15,0:15:23.85:0,24,185	0/0:30,0:30:31.70:0,32,209	0/1:40,0:40:32.48:32,0,231	0/0:26,0:26:77.98:0,78,983	0/0:39,0:39:99:0,111,1567	0/0:29,0:29:87.12:0,87,1152	0/0:18,0:18:47.97:0,48,550	0/1:31,0:31:99:395,0,160	0/0:19,0:12:32.99:0,33,376	0/0:24,0:24:71.94:0,72,951	0/0:33,0:33:96:0,96,1115	0/1:34,0:33:25.01:25,0,119	0/0:26,0:26:15.29:0,15,97	0/1:23,0:22:49.11:49,0,62	0/0:31,0:31:23.49:0,23,354	0/0:23,0:23:67.78:0,68,933	0/0:21,0:21:62.93:0,63,861	0/0:20,0:19:53.67:0,54,737
chr10	73932743	.	T	TG	295.38	PASS	AB=0.838;AC=4;AF=0.071;AN=56;BaseQRankSum=6.996;DP=739;FS=6.633;HRun=0;HaplotypeScore=102.5922;InbreedingCoeff=-0.0773;MQ=78.19;MQ0=3;MQRankSum=-5.087;QD=2.71;ReadPosRankSum=-2.390;VQSLOD=1.9084;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:24.55:0,25,337	0/0:13,0:13:39.13:0,39,545	0/0:29,0:24:57.14:0,57,773	0/0:41,0:34:54.81:0,55,987	0/0:21,0:21:60.20:0,60,839	0/0:34,0:34:93.30:0,93,1283	0/0:21,0:20:57.17:0,57,778	0/0:54,0:54:99:0,162,2179	0/0:26,0:26:78.21:0,78,1036	0/0:29,0:29:82.88:0,83,1152	0/0:12,0:12:32.94:0,33,461	0/1:17,6:23:99:172,0,646	0/1:25,11:36:99:190,0,896	0/0:27,0:26:78.26:0,78,1091	0/0:38,0:38:99:0,114,1594	0/0:24,0:24:66.22:0,66,922	0/0:24,0:24:66.22:0,66,923	0/0:19,0:19:51.17:0,51,709	0/0:15,0:15:45.14:0,45,613	0/0:28,0:28:78.26:0,78,1090	0/0:35,0:35:99:0,105,1468	0/1:25,4:29:20.50:21,0,887	0/0:18,4:22:15.04:0,15,193	0/1:19,2:20:21.90:22,0,269	0/0:19,0:19:54.18:0,54,754	0/0:21,0:21:63.21:0,63,880	0/0:32,0:32:93.29:0,93,1282	0/0:12,0:11:33.11:0,33,461
chr10	73933050	.	TC	T	1460.11	PASS	AB=0.871;AC=26;AF=0.464;AN=56;BaseQRankSum=7.916;DP=533;FS=5.928;HRun=12;HaplotypeScore=74.9621;InbreedingCoeff=0.2022;MQ=77.77;MQ0=3;MQRankSum=-1.531;QD=4.10;ReadPosRankSum=4.494;VQSLOD=0.8149;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:41.56:0,42,332	0/0:7,0:7:3:0,3,31	0/0:27,0:25:13.32:0,13,143	0/0:15,0:12:6.02:0,6,66	0/1:24,3:28:3.19:3,0,238	0/0:14,5:17:0.47:0,0,157	0/1:14,3:17:36.66:37,0,201	0/0:26,0:27:16.36:0,16,215	0/1:11,3:14:39.65:40,0,171	1/1:8,0:24:30.98:92,31,0	1/1:5,0:20:27.42:85,27,0	1/1:8,13:21:32.86:255,33,0	1/1:10,14:24:23.81:180,24,0	0/1:17,4:21:31.20:31,0,193	0/0:17,0:19:12.58:0,13,190	0/1:15,2:17:13:13,0,224	0/1:14,2:16:18.38:18,0,212	0/0:11,1:11:14.93:0,15,138	0/0:15,0:15:12.90:0,13,117	0/1:11,5:16:29.09:29,0,69	0/1:20,2:23:10.54:11,0,44	1/1:11,13:26:38.24:278,38,0	1/1:2,11:14:25.94:191,26,0	1/1:1,15:16:35.86:279,36,0	1/1:4,0:15:21.91:76,22,0	0/1:17,2:19:14.60:15,0,72	0/1:23,2:25:14.10:14,0,296	0/0:11,0:10:0.40:0,0,125
chr10	73940902	.	CAGAGACAGACAGAG	C	1020.55	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.395;DP=743;FS=7.438;HRun=0;HaplotypeScore=269.5372;InbreedingCoeff=0.9644;MQ=71.46;MQ0=3;MQRankSum=-3.291;QD=27.58;ReadPosRankSum=0.032;VQSLOD=1.2694;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,26:36:30.10:1115,30,0	0/0:10,0:10:30.10:0,30,1847	0/0:53,0:39:45.04:0,45,2219	0/0:73,0:46:56.89:0,57,2159	0/0:27,0:27:45.12:0,45,2402	0/0:25,0:25:51.18:0,51,3147	0/0:20,0:20:54.18:0,54,2955	0/0:39,0:39:48.16:0,48,2868	0/0:24,0:24:54.14:0,54,3465	0/0:28,0:28:63.19:0,63,3527	0/0:25,0:25:45.11:0,45,2010	0/0:21,0:21:39.12:0,39,2221	0/0:23,0:23:51.18:0,51,3206	0/0:28,0:28:48.16:0,48,3054	0/0:33,0:33:72.25:0,72,4792	0/0:30,0:29:57.18:0,57,3227	0/0:30,0:30:66.14:0,66,3590	0/0:20,0:20:48.16:0,48,2957	0/0:12,0:12:21.06:0,21,951	0/0:20,0:20:54.14:0,54,3377	0/0:25,0:25:66.23:0,66,4396	0/0:20,0:20:39.12:0,39,2255	0/0:12,0:12:27.06:0,27,1295	0/0:26,0:26:57.20:0,57,3549	0/0:23,0:23:57.20:0,57,3266	0/0:23,0:23:57.17:0,57,2895	0/0:28,0:28:75.20:0,75,4540	0/0:8,0:8:12.04:0,12,789
chr10	73948130	.	CAG	C	4023.77	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=10.553;DP=646;FS=12.820;HRun=0;HaplotypeScore=98.6629;InbreedingCoeff=0.9667;MQ=82.65;MQ0=2;MQRankSum=-1.406;QD=23.95;ReadPosRankSum=2.838;VQSLOD=3.9902;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:36:65.80:0,66,610	0/0:7,0:7:15.04:0,15,213	0/0:49,0:32:31.93:0,32,596	0/0:49,0:31:30.16:0,30,338	0/0:25,0:25:60.17:0,60,930	0/0:15,0:15:30.09:0,30,465	0/0:17,0:17:42.14:0,42,683	0/0:39,0:39:66.16:0,66,969	0/0:18,0:18:45.15:0,45,730	1/1:8,14:23:44.97:529,45,0	1/1:3,13:16:30.09:369,30,0	1/1:5,14:19:39.12:480,39,0	1/1:2,13:15:36.11:439,36,0	0/0:23,0:23:51.13:0,51,756	0/0:27,0:27:69.24:0,69,1120	0/0:27,1:28:35.33:0,35,1060	0/0:27,1:28:38.27:0,38,1047	1/1:4,21:26:54:642,54,0	0/0:19,0:19:42.14:0,42,651	0/0:19,0:19:15.03:0,15,719	0/0:35,0:35:87.23:0,87,1321	1/1:3,14:17:36.07:426,36,0	1/1:1,10:11:21.02:258,21,0	1/1:8,22:30:47.82:586,48,0	1/1:1,10:11:24.08:295,24,0	0/0:22,0:22:48.15:0,48,750	0/0:20,0:20:57.19:0,57,914	0/0:1,0:1:3.01:0,3,49
chr10	73950082	.	A	AT	1132.96	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.003;DP=626;FS=2.061;HRun=9;HaplotypeScore=61.0624;InbreedingCoeff=0.9920;MQ=79.06;MQ0=0;MQRankSum=-3.907;QD=28.32;ReadPosRankSum=0.982;VQSLOD=3.6810;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,38:40:99:1228,111,0	0/0:14,0:14:35.95:0,36,305	0/0:25,0:25:50.01:0,50,422	0/0:16,0:14:29.36:0,29,232	0/0:47,0:48:99:0,134,1151	0/0:20,0:20:56.97:0,57,491	0/0:20,0:20:41.10:0,41,363	0/0:32,0:32:74.96:0,75,647	0/0:19,0:19:50.95:0,51,434	0/0:33,0:33:89.97:0,90,781	0/0:21,1:22:26.77:0,27,453	0/0:20,1:21:20.80:0,21,409	0/0:17,0:17:32.95:0,33,282	0/0:22,0:22:56.97:0,57,495	0/0:16,0:16:38.99:0,39,339	0/0:11,0:11:32.99:0,33,287	0/0:24,0:24:68.98:0,69,599	0/0:34,0:34:98.98:0,99,859	0/0:22,0:22:53.98:0,54,469	0/0:21,0:21:44.97:0,45,391	0/0:10,0:11:29.01:0,29,236	0/0:19,0:19:56.99:0,57,494	0/0:13,0:13:35.99:0,36,312	0/0:18,0:18:47.99:0,48,417	0/0:21,0:21:56.99:0,57,495	0/0:27,0:28:62.01:0,62,527	0/0:28,0:28:44.68:0,45,549	0/0:11,0:11:29.98:0,30,260
chr10	73951359	.	TA	T	332.40	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.017;DP=573;FS=0.000;HRun=10;HaplotypeScore=61.7547;InbreedingCoeff=0.7174;MQ=73.90;MQ0=7;MQRankSum=-0.990;QD=12.78;ReadPosRankSum=0.378;VQSLOD=3.2103;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.22:0,87,952	0/0:7,0:7:21.06:0,21,232	0/0:47,1:19:3.08:0,3,176	0/0:44,0:22:31.49:0,31,298	0/0:21,0:21:51.13:0,51,557	0/0:13,0:13:30.08:0,30,332	0/0:14,0:14:36.07:0,36,381	0/0:29,2:30:19.98:0,20,620	0/0:19,0:19:57.11:0,57,617	0/0:21,0:20:48.12:0,48,525	0/0:24,0:25:68.99:0,69,721	0/0:16,0:16:45.12:0,45,497	0/0:10,0:10:21.04:0,21,220	0/0:7,0:7:21.06:0,21,232	0/0:14,0:14:42.11:0,42,465	0/0:16,0:16:36.10:0,36,398	0/0:26,0:26:57.08:0,57,607	1/1:5,21:26:5.97:413,6,0	0/0:21,0:21:42.11:0,42,459	0/0:24,0:24:63.17:0,63,697	0/0:10,0:10:27.07:0,27,299	0/0:9,0:9:27.07:0,27,299	0/0:7,0:7:18.05:0,18,199	0/0:9,0:9:21.06:0,21,232	0/0:30,0:30:87.24:0,87,962	0/0:33,1:34:67.15:0,67,942	0/0:24,1:25:37.12:0,37,630	0/0:15,0:15:38.76:0,39,401
chr10	73951883	.	AAAC	A	6373.69	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.759;DP=734;FS=11.945;HRun=0;HaplotypeScore=101.6953;InbreedingCoeff=0.9999;MQ=64.58;MQ0=1;MQRankSum=-0.898;QD=33.20;ReadPosRankSum=7.154;VQSLOD=3.9398;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,35:36:81.28:1283,81,0	0/0:11,0:11:30.10:0,30,655	0/0:32,0:31:81.27:0,81,1627	0/0:22,0:21:57.19:0,57,1132	0/0:27,0:27:75.26:0,75,1616	0/0:20,0:20:54.18:0,54,1141	0/0:27,0:27:78.19:0,78,1590	0/0:31,0:31:72.23:0,72,1406	0/0:21,0:21:57.18:0,57,1201	0/0:25,0:25:72.24:0,72,1470	0/0:16,0:16:48.16:0,48,1006	1/1:3,32:35:60.20:942,60,0	1/1:2,22:24:57.19:900,57,0	0/0:27,0:27:78.23:0,78,1638	0/0:48,0:48:99:0,126,2507	0/0:30,0:30:87.24:0,87,1700	0/0:20,0:20:54.14:0,54,1084	1/1:3,20:23:48.16:760,48,0	0/0:22,0:22:57.19:0,57,1173	0/0:27,0:27:63.20:0,63,1329	0/0:38,0:38:99:0,108,2238	1/1:1,22:23:54.05:768,54,0	1/1:3,20:23:53.99:772,54,0	1/1:3,25:28:60.20:949,60,0	0/0:24,0:24:66.22:0,66,1384	0/0:32,0:32:90.30:0,90,1900	0/0:24,0:24:64.10:0,64,1353	0/0:18,0:18:51.18:0,51,1106
chr10	73952418	.	GT	G	2595.89	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.782;DP=581;FS=0.406;HRun=8;HaplotypeScore=56.4027;InbreedingCoeff=0.9796;MQ=72.70;MQ0=2;MQRankSum=-1.215;QD=22.00;ReadPosRankSum=1.621;VQSLOD=4.0641;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.24:0,78,942	0/0:9,0:9:24.07:0,24,290	0/0:29,1:23:44.89:0,45,478	0/0:27,0:19:47.38:0,47,525	0/0:48,0:48:99:0,120,1417	0/0:27,1:28:52.24:0,52,898	0/0:15,0:15:42.12:0,42,495	0/0:38,0:38:96.28:0,96,1150	0/0:22,0:22:66.20:0,66,796	1/1:3,14:16:42.03:397,42,0	1/1:0,9:9:24.04:231,24,0	1/1:0,16:16:45.07:434,45,0	1/1:1,18:19:42.07:406,42,0	0/0:15,0:15:33.08:0,33,377	0/0:16,0:16:48.08:0,48,562	0/0:25,0:25:69.20:0,69,824	0/0:29,0:29:81.24:0,81,967	0/0:22,0:22:63.19:0,63,761	0/0:23,0:23:29.93:0,30,592	0/0:23,0:23:66.20:0,66,788	0/0:7,0:7:18.05:0,18,207	1/1:0,18:18:54.09:521,54,0	1/1:2,9:11:24.04:232,24,0	1/1:1,4:5:6.01:58,6,0	1/1:3,20:23:54.08:521,54,0	0/0:21,1:22:37.22:0,37,723	0/0:27,0:27:81.15:0,81,924	0/0:10,0:10:27.08:0,27,326
chr10	73953226	.	TTTTGCCTTCATG	T	1585.99	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.289;DP=490;FS=9.799;HRun=0;HaplotypeScore=160.7283;InbreedingCoeff=0.9582;MQ=61.46;MQ0=0;MQRankSum=-6.254;QD=66.08;ReadPosRankSum=0.748;VQSLOD=3.1105;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:28.21:1680,28,0	0/0:4,0:4:12.04:0,12,752	0/0:14,0:13:39.03:0,39,2133	0/0:19,0:18:51.64:0,52,2548	0/0:24,0:24:69.23:0,69,3960	0/0:20,0:20:57.20:0,57,3308	0/0:18,0:18:54.19:0,54,3032	0/0:42,0:41:99:0,123,6387	0/0:13,0:13:39.13:0,39,2087	0/0:19,0:19:57.19:0,57,3348	0/0:16,0:16:48.16:0,48,2660	0/0:11,0:11:33.10:0,33,1854	0/0:14,0:14:42.14:0,42,2331	0/0:14,0:14:42.13:0,42,2195	0/0:16,0:16:48.16:0,48,2912	0/0:9,0:9:27.08:0,27,1345	0/0:32,0:32:96.33:0,96,5696	0/0:22,0:21:63.22:0,63,3648	0/0:28,0:27:80.29:0,80,4070	0/0:20,0:20:54.17:0,54,2826	0/0:11,0:11:33.10:0,33,1878	0/0:8,0:8:24.08:0,24,1503	0/0:15,0:15:45.15:0,45,2655	0/0:6,0:6:18.06:0,18,1077	0/0:11,0:11:33.11:0,33,2002	0/0:22,0:22:66.22:0,66,3504	0/0:26,0:26:78.25:0,78,4480	0/0:12,0:12:36.12:0,36,2140
chr10	73953363	.	ATT	A	4310.18	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=11.143;DP=508;FS=1.234;HRun=11;HaplotypeScore=61.9424;InbreedingCoeff=0.9949;MQ=67.58;MQ0=2;MQRankSum=-0.442;QD=26.12;ReadPosRankSum=2.826;VQSLOD=4.9749;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,40:43:99:1117,105,0	0/0:8,0:8:18.06:0,18,277	0/0:17,0:13:20.07:0,20,233	0/0:14,0:10:20.16:0,20,185	0/0:23,0:23:57.65:0,58,838	0/0:12,0:12:30.98:0,31,445	0/0:14,0:14:30.09:0,30,441	0/0:41,0:42:96.26:0,96,1352	0/0:13,0:13:36.11:0,36,535	1/1:2,20:22:60.15:639,60,0	1/1:2,6:8:18.03:192,18,0	1/1:1,9:10:27.05:287,27,0	1/1:0,9:9:24.06:255,24,0	0/0:13,0:13:36.08:0,36,490	0/0:23,0:23:63.21:0,63,970	0/0:18,0:19:51.14:0,51,723	0/0:19,0:20:51.17:0,51,767	1/1:4,19:22:54.07:575,54,0	0/0:20,0:23:56.10:0,56,725	0/0:18,0:18:51.15:0,51,746	0/0:16,0:16:39.12:0,39,581	1/1:0,10:10:24.04:255,24,0	1/1:2,11:13:27.05:287,27,0	1/1:0,13:13:33.08:351,33,0	1/1:1,13:14:33.08:351,33,0	0/0:20,0:20:45.14:0,45,673	0/0:32,0:32:84.27:0,84,1261	0/0:12,0:13:38.61:0,39,547
chr10	73953710	.	T	TACACAC	1551.14	PASS	AB=1.000;AC=10;AF=0.192;AN=52;BaseQRankSum=0.749;DP=557;FS=3.585;HRun=0;HaplotypeScore=136.2418;InbreedingCoeff=0.6002;MQ=57.95;MQ0=17;MQRankSum=-0.259;QD=11.93;ReadPosRankSum=-1.302;VQSLOD=2.8760;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:28:8.61:0,9,532	0/0:8,0:8:3.01:0,3,61	./.	0/0:34,0:25:3.01:0,3,59	0/0:18,0:18:5.74:0,6,73	0/0:19,0:19:30.05:0,30,508	0/0:16,0:16:28.70:0,29,493	0/0:33,0:31:13.36:0,13,495	0/0:16,0:16:20.45:0,20,142	0/0:11,0:11:9.03:0,9,142	0/0:13,0:13:18.53:0,19,307	1/1:25,0:23:26.63:572,27,0	1/1:22,0:21:27.85:466,28,0	0/0:15,0:14:12.04:0,12,226	0/0:27,0:27:30.10:0,30,598	0/0:16,0:15:17.94:0,18,309	0/0:34,0:34:47.30:0,47,887	0/0:7,0:7:8.96:0,9,134	0/0:18,0:18:14.95:0,15,288	0/0:13,0:12:18.06:0,18,353	0/1:32,0:31:10.13:10,0,558	1/1:14,0:13:9.01:89,9,0	1/1:23,0:22:12.80:560,13,0	./.	0/0:20,0:20:24.06:0,24,379	0/1:14,0:13:6.41:6,0,171	0/0:33,0:30:36.12:0,36,665	0/0:8,0:6:6.02:0,6,111
chr10	73953743	.	ACTCTCTCTCT	A	345.25	PASS	AB=0.946;AC=8;AF=0.160;AN=50;BaseQRankSum=3.485;DP=550;FS=17.147;HRun=0;HaplotypeScore=156.4877;InbreedingCoeff=0.2706;MQ=46.04;MQ0=48;MQRankSum=-1.734;QD=3.23;ReadPosRankSum=-1.554;VQSLOD=1.6646;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:30:61.53:62,0,69	0/0:3,0:3:3.01:0,3,149	./.	./.	0/0:18,0:17:15.05:0,15,635	0/0:26,0:25:39.12:0,39,1231	0/1:24,0:23:25.07:25,0,629	0/0:36,0:28:9:0,9,169	0/0:15,0:15:4.07:0,4,319	1/1:6,4:8:10.12:256,10,0	./.	0/0:26,0:22:14.02:0,14,310	0/0:27,0:25:17.35:0,17,439	0/0:15,0:12:3.01:0,3,111	0/0:23,0:23:27.09:0,27,1160	0/0:16,0:14:13.20:0,13,772	0/0:37,0:36:44.01:0,44,1132	1/1:4,0:9:3.01:81,3,0	0/0:22,0:19:17.72:0,18,453	0/0:17,0:14:14.17:0,14,545	0/0:34,0:28:15.94:0,16,606	0/0:24,0:21:8.94:0,9,135	0/0:21,0:20:5.98:0,6,61	0/0:23,0:21:9.03:0,9,311	0/1:14,0:15:0:0,0,0	0/1:13,1:13:44.10:44,0,683	0/0:30,0:25:24.67:0,25,654	0/0:11,0:8:9.29:0,9,205
chr10	73953781	.	T	TCA	775.65	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=6.888;DP=478;FS=0.000;HRun=0;HaplotypeScore=92.9844;InbreedingCoeff=0.7640;MQ=63.01;MQ0=33;MQRankSum=-0.542;QD=7.12;ReadPosRankSum=-0.821;VQSLOD=2.9338;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:26:37.67:0,38,288	0/0:3,0:3:8.93:0,9,86	0/0:21,0:11:18.82:0,19,181	0/0:39,0:11:29.33:0,29,210	0/0:17,0:17:29.94:0,30,238	0/0:22,0:21:51.04:0,51,530	0/0:13,0:12:26.82:0,27,293	0/0:18,0:18:43.98:0,44,383	0/0:12,0:12:25.12:0,25,201	1/1:9,0:9:20.57:155,21,0	1/1:16,0:16:26.97:225,27,0	1/1:19,0:16:0.60:151,1,0	0/1:23,0:22:24.20:105,0,24	0/0:13,0:12:23.33:0,23,179	0/0:17,0:17:45.03:0,45,497	0/0:18,0:16:44.93:0,45,436	0/0:26,0:25:65.34:0,65,613	0/0:10,0:10:14.90:0,15,115	0/0:10,0:9:25.53:0,26,254	0/0:18,0:15:36.76:0,37,317	0/0:22,0:18:7.97:0,8,216	1/1:17,0:15:4.51:22,5,0	0/0:4,7:11:5.12:0,5,32	1/1:14,0:13:18.41:176,18,0	1/1:11,0:10:14.89:114,15,0	0/0:16,0:15:40.84:0,41,434	0/0:20,0:17:35.57:0,36,342	0/0:14,0:12:32.54:0,33,239
chr10	73953785	.	T	TCACTCA	1658.40	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=-2.601;DP=463;FS=2.768;HRun=0;HaplotypeScore=109.9359;InbreedingCoeff=0.8142;MQ=65.40;MQ0=28;MQRankSum=-0.637;QD=14.30;ReadPosRankSum=-3.171;VQSLOD=2.4012;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:42.10:0,42,641	0/0:3,0:3:9.03:0,9,167	0/0:22,0:12:6.89:0,7,299	0/0:39,0:11:28.35:0,28,345	0/0:15,0:15:36:0,36,581	0/0:21,0:20:26.66:0,27,845	0/0:15,0:14:31.32:0,31,558	0/0:17,0:17:38.47:0,38,627	0/0:11,0:11:27.08:0,27,446	1/1:12,0:12:14.42:334,14,0	1/1:16,0:16:27.09:450,27,0	1/1:16,0:14:17.98:290,18,0	1/1:0,15:20:8.82:207,9,0	0/0:12,0:11:27.03:0,27,373	0/0:19,0:19:51.12:0,51,895	0/0:17,0:15:45.13:0,45,749	0/0:25,0:24:43.75:0,44,1027	0/0:10,0:10:2.83:0,3,27	0/0:11,0:10:26.77:0,27,463	0/0:17,0:14:36.12:0,36,612	0/0:19,0:16:39.09:0,39,548	0/1:18,0:16:5.84:18,0,6	0/1:8,0:8:0.09:0,0,0	1/1:13,0:12:11.88:290,12,0	1/1:12,0:11:18.05:249,18,0	0/0:17,0:16:47.38:0,47,823	0/0:19,0:17:33.57:0,34,599	0/0:12,0:11:28.44:0,28,447
chr10	73954067	.	G	GA	1691.91	PASS	AB=0.927;AC=19;AF=0.339;AN=56;BaseQRankSum=-4.223;DP=420;FS=12.956;HRun=9;HaplotypeScore=48.8035;InbreedingCoeff=0.7392;MQ=57.04;MQ0=16;MQRankSum=0.452;QD=11.83;ReadPosRankSum=1.102;VQSLOD=1.2452;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:30:27.98:0,28,484	0/0:5,0:4:5.10:0,5,50	0/0:14,0:8:17.46:0,17,136	0/0:23,0:9:12.08:0,12,82	0/0:14,0:12:29.67:0,30,260	0/0:12,0:12:23.93:0,24,208	0/0:20,0:18:26.38:0,26,233	0/0:33,1:32:33.67:0,34,515	0/0:12,0:12:23.87:0,24,201	1/1:11,13:22:45.90:477,46,0	1/1:7,14:18:42.11:464,42,0	1/1:2,6:8:18.05:199,18,0	1/1:5,3:7:10.85:103,11,0	0/0:12,0:10:23.99:0,24,208	0/0:8,0:8:11.90:0,12,104	0/0:17,0:15:35.97:0,36,310	0/1:19,1:19:7.72:8,0,202	0/0:18,0:18:38.95:0,39,332	0/0:14,0:12:32.96:0,33,281	0/0:15,0:14:29.98:0,30,258	0/0:6,0:5:5.99:0,6,52	1/1:0,3:3:9.02:100,9,0	1/1:3,7:9:9.02:100,9,0	1/1:1,7:8:15.04:166,15,0	1/1:3,11:14:24.06:266,24,0	0/1:19,1:19:3.24:3,0,201	0/0:22,0:20:47.91:0,48,412	0/1:6,1:7:4.98:5,0,135
chr10	73954252	.	GTC	G	290.31	PASS	AB=0.922;AC=14;AF=0.280;AN=50;BaseQRankSum=4.313;DP=625;FS=10.444;HRun=0;HaplotypeScore=99.5443;InbreedingCoeff=-0.1312;MQ=75.57;MQ0=12;MQRankSum=3.544;QD=0.82;ReadPosRankSum=0.453;VQSLOD=1.0935;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,9:17:20.62:179,21,0	./.	./.	0/1:88,0:36:8.91:9,0,34	0/0:19,0:19:18.04:0,18,252	0/1:26,4:30:4.25:4,0,703	0/1:14,2:16:37.23:37,0,310	0/1:33,0:33:21.71:22,0,95	0/1:16,1:17:12.58:13,0,252	0/0:23,0:23:21.99:0,22,143	0/1:22,0:22:0.08:0,0,0	0/0:10,0:10:12.40:0,12,107	0/0:18,0:17:11.11:0,11,89	0/1:14,4:19:34.22:34,0,330	0/1:16,6:22:42.34:42,0,393	0/1:22,2:24:25.14:25,0,498	0/0:23,2:25:5.43:0,5,465	./.	0/1:22,3:25:36.05:36,0,310	0/0:10,0:10:17.96:0,18,202	0/0:20,2:22:6.48:0,6,455	0/0:16,0:16:3.41:0,3,19	0/0:23,0:23:2.86:0,3,34	0/1:10,0:9:0:0,0,0	0/0:22,0:21:0.86:0,1,21	0/0:25,0:25:27.02:0,27,326	0/1:27,2:29:25.17:25,0,482	0/0:10,0:9:8.39:0,8,86
chr10	73954284	.	CTCTT	C	302.16	PASS	AB=0.906;AC=14;AF=0.259;AN=54;BaseQRankSum=7.377;DP=510;FS=4.454;HRun=0;HaplotypeScore=96.7643;InbreedingCoeff=0.1117;MQ=51.23;MQ0=17;MQRankSum=0.870;QD=2.36;ReadPosRankSum=-3.233;VQSLOD=0.9859;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:42.42:42,0,206	./.	0/0:32,0:8:14.49:0,14,125	0/0:47,0:5:0.12:0,0,132	0/0:18,0:18:45.55:0,46,750	0/0:36,0:36:94.70:0,95,1671	0/0:18,0:18:52.92:0,53,787	0/0:17,0:16:33.15:0,33,474	0/0:17,0:17:41:0,41,746	0/1:12,2:14:99:99,0,134	1/1:12,1:13:5:48,5,0	0/1:8,1:9:28.47:28,0,121	0/1:20,0:19:27.20:27,0,93	0/0:21,0:20:51.02:0,51,855	0/0:24,0:23:33.07:0,33,975	0/0:24,0:24:72.11:0,72,1330	0/0:20,0:20:18.03:0,18,945	1/1:3,0:3:2.96:19,3,0	0/0:19,0:17:37.14:0,37,855	0/0:13,0:13:35.84:0,36,481	0/0:27,0:27:68.82:0,69,1226	0/1:7,2:8:10:40,0,10	0/1:10,2:12:22.92:37,0,23	1/1:10,1:10:6.07:45,6,0	0/1:6,2:7:30.45:61,0,30	0/0:21,0:21:60.03:0,60,981	0/0:28,0:28:78.04:0,78,1295	0/1:9,0:7:8.60:9,0,202
chr10	73954302	.	C	CTG	1861.95	PASS	AC=18;AF=0.333;AN=54;BaseQRankSum=4.147;DP=526;FS=1.225;HRun=0;HaplotypeScore=89.5446;InbreedingCoeff=0.9083;MQ=59.48;MQ0=9;MQRankSum=-1.939;QD=16.77;ReadPosRankSum=-1.775;VQSLOD=3.4428;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:34.40:0,34,398	./.	0/0:33,0:21:48.38:0,48,523	0/0:28,0:13:30.06:0,30,355	0/0:20,0:20:30.16:0,30,536	0/0:33,0:33:83.98:0,84,982	0/0:15,0:15:15.06:0,15,339	0/0:24,0:25:47.97:0,48,548	0/0:22,0:22:48.07:0,48,542	1/1:6,17:24:53.19:798,53,0	1/1:3,5:8:5.91:84,6,0	1/1:1,9:11:12.04:195,12,0	1/1:9,10:18:14.77:213,15,0	0/0:18,0:17:30.09:0,30,369	0/0:24,0:23:51.13:0,51,604	0/0:29,0:29:75.22:0,75,910	0/0:19,0:19:48.11:0,48,570	1/1:0,3:3:3.01:49,3,0	0/0:14,0:14:21.05:0,21,238	0/0:19,0:19:46.03:0,46,556	0/0:27,0:27:58.10:0,58,809	1/1:3,2:5:9.03:145,9,0	1/1:11,4:15:11.55:182,12,0	1/1:2,14:16:12.04:196,12,0	1/1:3,7:9:12.04:196,12,0	0/0:26,0:26:72.21:0,72,864	0/0:28,0:29:78.08:0,78,937	0/0:7,0:7:9.03:0,9,111
chr10	73954474	.	CT	C	683.80	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.929;DP=675;FS=4.187;HRun=2;HaplotypeScore=62.5040;InbreedingCoeff=0.9954;MQ=86.28;MQ0=0;MQRankSum=-2.662;QD=32.56;ReadPosRankSum=0.608;VQSLOD=3.5522;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:60.20:779,60,0	0/0:11,0:11:30.07:0,30,408	0/0:13,0:13:39.08:0,39,528	0/0:31,0:31:80.07:0,80,1161	0/0:34,0:34:99:0,99,1442	0/0:25,0:25:72.23:0,72,1058	0/0:20,0:20:57.18:0,57,832	0/0:39,0:39:99:0,111,1644	0/0:32,0:32:96.33:0,96,1439	0/0:40,0:39:99:0,114,1665	0/0:23,0:23:69.23:0,69,1014	0/0:16,0:16:48.16:0,48,719	0/0:28,0:28:78.24:0,78,1129	0/0:18,0:18:54.17:0,54,788	0/0:38,0:38:99:0,114,1687	0/0:21,0:21:63.18:0,63,886	0/0:27,0:27:78.25:0,78,1148	0/0:18,0:18:51.14:0,51,722	0/0:21,0:21:63.20:0,63,910	0/0:21,0:21:63.20:0,63,925	0/0:24,0:24:72.22:0,72,1056	0/0:24,0:24:69.18:0,69,990	0/0:20,0:20:60.20:0,60,897	0/0:17,0:17:51.15:0,51,724	0/0:18,0:18:54.16:0,54,772	0/0:33,0:33:99:0,99,1468	0/0:35,0:35:99:0,102,1470	0/0:7,0:7:21.07:0,21,314
chr10	73955315	.	C	CT	511.30	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.096;DP=815;FS=3.078;HRun=8;HaplotypeScore=76.8972;InbreedingCoeff=0.9819;MQ=73.12;MQ0=0;MQRankSum=0.398;QD=24.35;ReadPosRankSum=0.493;VQSLOD=4.3832;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,152,1367	0/0:13,0:13:39.02:0,39,357	0/0:14,0:13:23.97:0,24,208	0/0:20,0:18:33.01:0,33,300	0/0:26,0:26:66:0,66,597	0/0:28,0:28:62.38:0,62,557	0/0:31,0:31:87.04:0,87,796	0/0:40,0:40:90.01:0,90,819	0/0:36,0:36:96.03:0,96,875	0/0:32,0:32:51.84:0,52,656	0/0:21,0:21:53.86:0,54,493	0/0:37,0:37:90:0,90,813	0/0:41,0:41:99:0,111,1011	0/0:35,0:35:96.01:0,96,870	0/0:33,0:33:84.03:0,84,765	0/0:40,0:40:99:0,108,981	0/0:40,0:40:99:0,105,961	1/1:3,18:21:54.09:606,54,0	0/0:24,0:24:54.01:0,54,490	0/0:27,0:27:65.76:0,66,584	0/0:36,0:36:99:0,102,933	0/0:26,0:26:69.03:0,69,631	0/0:19,0:19:35.99:0,36,325	0/0:32,0:32:66.95:0,67,768	0/0:22,0:22:60:0,60,543	0/0:26,0:26:63.02:0,63,576	0/0:33,0:32:87:0,87,782	0/0:7,0:7:14.99:0,15,137
chr10	73956294	.	GT	G	452.47	PASS	AB=0.909;AC=3;AF=0.056;AN=54;BaseQRankSum=6.281;DP=382;FS=8.878;HRun=2;HaplotypeScore=47.0507;InbreedingCoeff=0.4995;MQ=50.47;MQ0=20;MQRankSum=1.928;QD=10.77;ReadPosRankSum=2.093;VQSLOD=1.0942;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,21:25:42.14:544,42,0	0/0:10,0:10:30.10:0,30,445	./.	0/0:3,0:2:6.02:0,6,90	0/0:21,0:20:45.09:0,45,609	0/0:22,0:21:57.19:0,57,851	0/0:13,0:12:30.07:0,30,420	0/0:15,0:15:39.13:0,39,579	0/0:14,0:12:36.05:0,36,511	0/0:9,0:7:18:0,18,269	0/0:14,0:13:27.08:0,27,384	0/0:9,0:9:20.99:0,21,315	0/0:8,0:7:21.07:0,21,314	0/0:16,0:16:42.07:0,42,601	0/0:11,0:11:33.11:0,33,494	0/0:13,1:14:0.26:0,0,474	0/0:29,1:28:42.39:0,42,1103	0/0:22,1:21:47.92:0,48,692	0/1:9,1:9:8.87:9,0,313	0/0:11,0:10:21.07:0,21,306	0/0:14,0:13:27.09:0,27,395	0/0:8,0:8:21.02:0,21,253	0/0:11,0:10:27.08:0,27,375	0/0:4,0:4:12.04:0,12,180	0/0:17,0:17:45.14:0,45,654	0/0:22,0:21:60.20:0,60,881	0/0:15,0:15:42.14:0,42,623	0/0:4,0:4:12.04:0,12,180
chr10	73957286	.	GA	G	2249.62	PASS	AB=0.773;AC=21;AF=0.375;AN=56;BaseQRankSum=7.495;DP=747;FS=6.964;HRun=14;HaplotypeScore=87.8094;InbreedingCoeff=0.2691;MQ=68.21;MQ0=4;MQRankSum=1.132;QD=5.64;ReadPosRankSum=5.135;VQSLOD=2.4896;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,27:49:1.71:367,2,0	0/0:11,2:13:5.71:0,6,163	0/0:38,2:17:20.10:0,20,160	0/1:24,3:18:37.25:97,0,37	0/0:19,2:21:18.39:0,18,299	0/0:21,2:23:12.88:0,13,399	0/1:18,4:26:32.17:32,0,260	0/0:17,1:20:30.59:0,31,269	0/0:25,1:27:30.07:0,30,296	0/1:12,14:30:1.12:233,0,1	1/1:6,17:23:29.93:280,30,0	0/1:8,11:19:49.79:114,0,50	1/1:8,21:30:0.45:262,0,0	0/0:41,5:48:44.11:0,44,511	0/1:31,0:33:17.04:17,0,288	0/0:29,1:32:41.40:0,41,527	0/0:22,0:22:42.01:0,42,377	0/1:11,12:23:20.02:170,0,20	0/0:28,3:31:8.61:0,9,374	0/1:22,4:26:16.31:16,0,264	0/0:26,2:31:21.98:0,22,524	1/1:5,11:17:34.75:232,35,0	1/1:3,9:14:18.37:110,18,0	1/1:4,26:30:59.49:411,59,0	0/1:4,11:15:9.28:83,0,9	0/1:31,3:35:6.06:6,0,354	0/0:30,0:30:44.18:0,44,424	0/0:9,0:9:12:0,12,107
chr10	73958074	.	TAA	T	1287.95	PASS	AB=0.800;AC=12;AF=0.214;AN=56;BaseQRankSum=5.955;DP=374;FS=0.000;HRun=15;HaplotypeScore=50.5579;InbreedingCoeff=0.6948;MQ=47.66;MQ0=26;MQRankSum=3.358;QD=12.75;ReadPosRankSum=2.420;VQSLOD=2.2288;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,16:19:41.76:413,42,0	0/0:8,0:7:16.60:0,17,207	0/0:7,0:1:3.01:0,3,33	0/1:4,0:2:3.11:3,0,35	0/0:15,0:15:29.40:0,29,327	0/0:23,0:22:33.34:0,33,644	0/0:5,0:4:8.98:0,9,101	0/0:36,0:30:57.55:0,58,699	0/0:4,0:4:11.88:0,12,97	1/1:4,8:11:23.98:210,24,0	1/1:3,10:14:20.64:261,21,0	0/0:1,0:7:12.94:0,13,54	0/0:4,0:9:9.59:0,10,39	0/0:7,0:7:14.48:0,14,150	0/0:6,0:6:18.04:0,18,228	0/0:11,0:10:25.53:0,26,305	0/0:23,0:20:41.61:0,42,509	1/1:10,7:13:18.34:189,18,0	0/0:16,0:17:29.80:0,30,313	0/0:18,0:18:36.06:0,36,452	0/0:5,0:4:8.52:0,9,90	0/0:2,0:3:5.45:0,5,28	0/0:2,0:8:12.81:0,13,53	0/1:2,1:6:13.11:17,0,13	1/1:7,14:22:38.21:369,38,0	0/0:16,1:16:3.60:0,4,306	0/0:13,0:16:35.56:0,36,409	0/0:16,0:17:44.41:0,44,527
chr10	73960552	.	TC	T	1488.92	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.639;DP=771;FS=9.236;HRun=4;HaplotypeScore=71.5801;InbreedingCoeff=0.9957;MQ=78.42;MQ0=0;MQRankSum=-0.072;QD=30.39;ReadPosRankSum=1.306;VQSLOD=3.7748;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,47:49:99:1584,132,0	0/0:8,0:8:21.07:0,21,294	0/0:18,0:18:45.14:0,45,606	0/0:16,0:16:35.85:0,36,454	0/0:24,0:23:69.20:0,69,920	0/0:21,0:21:63.20:0,63,865	0/0:42,0:42:99:0,117,1596	0/0:34,0:34:93.31:0,93,1295	0/0:29,0:29:87.29:0,87,1218	0/0:24,0:24:72.18:0,72,954	0/0:17,0:17:45.15:0,45,628	0/0:33,0:33:93.30:0,93,1284	0/0:32,0:32:93.31:0,93,1302	0/0:28,0:28:84.28:0,84,1171	0/0:32,0:32:90.30:0,90,1260	0/0:23,0:23:69.23:0,69,962	0/0:36,0:36:96.32:0,96,1342	0/0:42,0:42:99:0,120,1671	0/0:25,0:25:69.20:0,69,920	0/0:24,0:24:72.20:0,72,956	0/0:62,0:62:99:0,178,2386	0/0:17,0:17:51.17:0,51,690	0/0:13,0:13:39.12:0,39,528	0/0:33,0:33:93.31:0,93,1292	0/0:26,0:26:75.24:0,75,1033	0/0:22,0:22:60.20:0,60,834	0/0:26,0:26:78.26:0,78,1089	0/0:15,0:15:39.13:0,39,546
chr10	73961921	.	AT	A	1173.06	PASS	AB=0.522;AC=9;AF=0.161;AN=56;BaseQRankSum=14.282;DP=645;FS=7.997;HRun=1;HaplotypeScore=95.4848;InbreedingCoeff=0.8682;MQ=85.27;MQ0=0;MQRankSum=-13.953;QD=10.47;ReadPosRankSum=2.498;VQSLOD=1.4154;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:32:63.80:436,64,0	0/0:11,0:11:33.11:0,33,527	0/0:24,0:24:66.22:0,66,1026	0/0:26,0:25:72.22:0,72,1100	0/0:20,0:20:57.65:0,58,882	0/0:22,0:22:66.23:0,66,1055	0/0:20,0:20:60.20:0,60,957	0/0:33,0:33:99:0,99,1538	0/0:10,0:10:30.10:0,30,480	1/1:6,19:25:44.49:321,44,0	1/1:5,20:25:24.25:251,24,0	0/0:23,0:23:66.22:0,66,1039	0/0:23,0:23:69.22:0,69,1065	0/0:20,0:20:60.20:0,60,950	0/0:22,0:22:66.20:0,66,1030	0/0:20,0:20:60.20:0,60,957	0/0:28,0:28:84.26:0,84,1317	1/1:6,12:18:25.56:225,26,0	0/0:16,0:16:48.16:0,48,766	0/0:30,0:30:90.29:0,90,1406	0/0:50,0:50:99:0,150,2348	0/0:20,0:20:60.18:0,60,901	0/0:16,0:16:48.14:0,48,734	0/0:30,0:30:90.31:0,90,1430	0/1:1,11:12:19.28:104,0,19	0/0:23,0:23:49.25:0,49,1013	0/0:31,0:31:93.32:0,93,1484	0/0:15,0:15:45.15:0,45,716
chr10	73961923	.	CGCCAT	C	3596.35	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=15.113;DP=645;FS=6.800;HRun=0;HaplotypeScore=136.9986;InbreedingCoeff=0.9992;MQ=86.61;MQ0=0;MQRankSum=-14.123;QD=33.30;ReadPosRankSum=1.407;VQSLOD=3.4139;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:30:64.36:1114,64,0	0/0:12,0:12:33.11:0,33,979	0/0:27,0:27:78.27:0,78,2324	0/0:25,0:24:72.24:0,72,2220	0/0:19,0:19:57.20:0,57,1877	0/0:23,0:23:69.24:0,69,2157	0/0:21,0:21:63.22:0,63,1947	0/0:31,0:31:93.32:0,93,2889	0/0:10,0:10:30.10:0,30,991	1/1:4,19:24:49.17:896,49,0	1/1:5,20:25:44.95:698,45,0	0/0:22,0:22:66.21:0,66,2111	0/0:22,0:22:66.23:0,66,2159	0/0:20,0:20:60.19:0,60,1922	0/0:22,0:22:66.23:0,66,2118	0/0:22,0:22:66.23:0,66,2074	0/0:27,0:27:81.26:0,81,2622	1/1:5,12:17:39.88:525,40,0	0/0:16,0:16:48.16:0,48,1496	0/0:30,0:30:90.30:0,90,2815	0/0:50,0:50:99:0,151,4833	0/0:20,0:20:60.20:0,60,1847	0/0:17,0:17:51.17:0,51,1543	0/0:31,0:31:93.28:0,93,2933	1/1:1,11:12:22.88:364,23,0	0/0:24,0:24:56.89:0,57,2151	0/0:32,0:32:96.33:0,96,3118	0/0:14,0:14:42.14:0,42,1364
chr10	73962414	.	CTGTG	C	68.49	PASS	AB=1.000;AC=13;AF=0.283;AN=46;BaseQRankSum=2.104;DP=397;FS=0.000;HRun=0;HaplotypeScore=59.8130;InbreedingCoeff=0.3954;MQ=28.91;MQ0=92;MQRankSum=0.868;QD=0.50;ReadPosRankSum=-0.221;VQSLOD=1.3089;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:23:1.25:4,1,0	0/0:8,0:6:3.46:0,3,12	./.	./.	0/0:12,0:10:1.77:0,2,27	0/1:16,0:13:0:0,0,0	0/1:22,0:9:0:0,0,0	0/0:17,0:5:3.48:0,3,40	0/0:10,0:8:5.93:0,6,66	0/0:18,0:15:18.05:0,18,248	0/1:12,0:10:0:0,0,0	1/1:12,0:9:3.01:35,3,0	1/1:15,0:10:6.02:80,6,0	0/0:11,0:9:0:0,0,0	0/0:8,0:8:2.68:0,3,33	0/0:13,0:11:11.97:0,12,125	0/0:31,0:15:5.95:0,6,68	0/0:13,0:5:0:0,0,0	0/0:11,0:8:2.04:0,2,6	1/1:13,0:13:3.01:35,3,0	0/0:24,0:10:0.47:0,0,1	./.	./.	1/1:13,0:8:2.98:21,3,0	./.	0/0:20,0:17:19.96:0,20,221	0/0:10,0:7:3.01:0,3,34	0/0:10,0:6:0.76:0,1,37
chr10	73963476	.	GTCC	G	9258.15	PASS	AB=0.943;AC=21;AF=0.375;AN=56;BaseQRankSum=14.913;DP=687;FS=3.692;HRun=0;HaplotypeScore=106.0619;InbreedingCoeff=0.9360;MQ=87.00;MQ0=0;MQRankSum=-6.555;QD=34.42;ReadPosRankSum=0.747;VQSLOD=5.5828;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,52:54:99:2120,132,0	0/0:17,0:17:48.16:0,48,1059	0/0:25,0:25:56.85:0,57,1098	0/0:30,0:31:50.48:0,50,1165	0/0:28,0:28:81.28:0,81,1783	0/0:23,0:23:57.20:0,57,1256	0/0:32,0:32:87.30:0,87,1920	0/0:31,0:31:69.22:0,69,1442	0/0:15,0:15:42.14:0,42,926	1/1:2,28:30:84.27:1325,84,0	1/1:0,15:16:45.15:718,45,0	1/1:0,15:15:39.13:627,39,0	1/1:2,24:26:69.24:1106,69,0	0/0:23,0:23:66.23:0,66,1453	0/0:26,0:26:72.25:0,72,1567	0/0:21,0:21:63.22:0,63,1379	0/0:27,0:27:78.27:0,78,1713	1/1:2,18:20:48.16:769,48,0	0/0:23,0:23:69.24:0,69,1524	0/0:30,0:30:87.30:0,87,1874	0/0:34,0:34:96.33:0,96,2095	1/1:3,17:20:42.14:669,42,0	1/1:1,16:17:42.14:672,42,0	1/1:3,23:26:48.16:771,48,0	1/1:2,10:12:30.10:481,30,0	0/1:31,2:33:0.05:0,0,1889	0/0:29,0:29:81.28:0,81,1762	0/0:2,0:2:3.01:0,3,66
chr10	73966172	.	CTAAA	C	1166.63	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=5.929;DP=481;FS=3.597;HRun=0;HaplotypeScore=73.1370;InbreedingCoeff=0.8682;MQ=75.10;MQ0=4;MQRankSum=-2.148;QD=13.89;ReadPosRankSum=1.195;VQSLOD=2.5982;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:21:14.87:156,15,0	0/0:5,0:5:15.03:0,15,308	0/0:31,0:16:35.07:0,35,376	0/0:11,0:7:15.43:0,15,137	0/0:23,0:23:63.85:0,64,842	0/0:18,0:18:54.05:0,54,801	0/0:19,0:19:56.11:0,56,910	0/0:23,0:23:66.01:0,66,813	0/0:17,0:17:45.07:0,45,651	1/1:11,0:16:41.91:405,42,0	1/1:0,13:15:37.96:264,38,0	0/0:15,0:15:33.03:0,33,413	0/0:16,0:15:24:0,24,263	0/0:24,0:24:68.13:0,68,890	0/0:19,0:19:48.05:0,48,730	0/0:11,0:11:31.58:0,32,374	0/0:10,0:10:27.05:0,27,471	0/1:15,0:15:7.98:8,0,134	0/0:17,0:17:36.12:0,36,555	0/0:23,0:23:69.01:0,69,1045	0/0:6,0:6:17.51:0,18,250	0/0:14,0:14:41.10:0,41,602	0/0:16,0:16:48.09:0,48,823	0/0:19,0:19:54.11:0,54,1020	1/1:9,3:17:46.38:495,46,0	0/0:28,0:27:81.05:0,81,1088	0/0:24,0:23:66.12:0,66,1019	0/0:8,0:8:19.55:0,20,249
chr10	73972752	.	G	GTGA	13889.62	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-6.712;DP=792;FS=0.947;HRun=0;HaplotypeScore=112.2049;InbreedingCoeff=0.9998;MQ=79.92;MQ0=0;MQRankSum=-5.324;QD=50.32;ReadPosRankSum=4.227;VQSLOD=7.1407;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,28:38:78.27:1721,78,0	0/0:12,0:12:33.08:0,33,490	0/0:22,0:22:41.65:0,42,836	0/0:19,0:18:48.12:0,48,695	0/0:27,0:27:78.25:0,78,1239	0/0:26,0:26:78.25:0,78,1249	0/0:37,0:37:99:0,105,1682	0/0:35,0:35:96.32:0,96,1534	0/0:35,0:35:99:0,99,1568	1/1:5,34:40:99:2300,108,0	1/1:0,11:11:27.09:603,27,0	1/1:3,25:30:69.23:1531,69,0	1/1:1,29:30:78.27:1738,78,0	0/0:37,0:37:99:0,108,1710	0/0:32,0:32:87.28:0,87,1397	0/0:32,0:32:90.31:0,90,1470	0/0:36,0:36:99:0,99,1539	1/1:4,18:22:54.19:1193,54,0	0/0:24,0:24:66.22:0,66,1078	0/0:21,0:21:63.22:0,63,1029	0/0:46,0:46:99:0,123,2009	1/1:4,18:23:44.93:988,45,0	1/1:5,16:21:39.13:869,39,0	1/1:5,36:44:87.03:1942,87,0	1/1:1,16:17:45.15:1004,45,0	0/0:29,0:29:81.25:0,81,1272	0/0:32,0:32:90.29:0,90,1446	0/0:14,0:14:42.12:0,42,660
chr10	73974372	.	TTGTGTGTGTGTGTGTGTGTGTG	T	3571.51	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.688;DP=560;FS=9.875;HRun=0;HaplotypeScore=288.2441;InbreedingCoeff=0.9494;MQ=64.34;MQ0=9;MQRankSum=-4.485;QD=47.62;ReadPosRankSum=-0.034;VQSLOD=1.3879;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:18.56:0,19,809	0/0:6,0:6:15.05:0,15,950	0/0:21,0:17:12.01:0,12,116	0/0:17,0:9:11.93:0,12,102	0/0:23,0:24:54.08:0,54,3120	0/0:14,0:14:24.47:0,24,1183	0/0:22,0:22:48.09:0,48,2259	0/0:27,0:27:34.63:0,35,553	0/0:13,0:13:27.02:0,27,991	1/1:7,13:20:29.53:442,30,0	1/1:9,9:18:13.34:872,13,0	0/0:23,0:24:60.10:0,60,3057	0/0:17,0:17:38.97:0,39,1790	0/0:14,0:14:33.56:0,34,2134	0/0:19,0:19:45.12:0,45,3146	0/0:14,0:15:39.07:0,39,2228	0/0:25,0:26:57.12:0,57,3795	0/0:17,0:17:27.02:0,27,1362	0/0:7,0:7:12.04:0,12,556	0/0:18,0:21:35.71:0,36,1460	0/0:40,0:38:60.07:0,60,3132	0/0:12,0:12:30.08:0,30,2030	0/0:24,0:24:45.08:0,45,2477	0/0:12,0:13:33.07:0,33,2417	1/1:4,32:37:39.13:2258,39,0	0/0:24,0:24:54.04:0,54,1592	0/0:27,0:25:60:0,60,2598	0/0:17,0:15:36.12:0,36,2834
chr10	73974408	.	G	GTA	81.61	PASS	AB=0.776;AC=2;AF=0.036;AN=56;BaseQRankSum=2.429;DP=580;FS=0.000;HRun=0;HaplotypeScore=102.2151;InbreedingCoeff=-0.0341;MQ=54.07;MQ0=18;MQRankSum=2.095;QD=2.09;ReadPosRankSum=1.343;VQSLOD=1.9613;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:35.38:0,35,299	0/0:10,0:9:20.98:0,21,184	0/0:24,0:10:17.17:0,17,187	0/0:21,0:6:13.52:0,14,101	0/0:17,0:16:21.22:0,21,441	0/0:15,0:15:16.70:0,17,300	0/0:25,0:25:68.93:0,69,703	0/0:27,0:28:75.79:0,76,612	0/0:16,0:16:35.75:0,36,352	0/0:21,0:21:29.68:0,30,205	0/0:15,0:15:22.14:0,22,134	0/0:20,0:19:52.75:0,53,550	0/0:17,0:17:41.31:0,41,394	0/1:18,0:18:0.53:1,0,242	0/0:22,0:22:39.78:0,40,604	0/0:21,0:21:35.45:0,35,516	0/0:28,0:28:77.63:0,78,761	0/1:4,17:21:31.65:156,0,32	0/0:13,0:11:29.92:0,30,258	0/0:10,0:10:23.94:0,24,231	0/0:41,0:38:68.51:0,69,698	0/0:10,0:10:4.90:0,5,246	0/0:14,0:14:36.02:0,36,392	0/0:18,0:19:46.80:0,47,510	0/0:39,0:39:48.95:0,49,304	0/0:19,0:19:48.12:0,48,421	0/0:30,0:28:55.59:0,56,492	0/0:18,0:17:47.97:0,48,529
chr10	73975306	.	A	AC	13340.31	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-10.275;DP=805;FS=1.500;HRun=0;HaplotypeScore=78.1242;InbreedingCoeff=1.0000;MQ=71.06;MQ0=1;MQRankSum=-1.396;QD=43.60;ReadPosRankSum=3.142;VQSLOD=5.4113;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,52:52:99:2301,144,0	0/0:17,0:17:51.17:0,51,713	0/0:30,0:30:90.30:0,90,1246	0/0:19,0:18:51.17:0,51,700	0/0:17,0:17:51.15:0,51,694	0/0:15,0:14:45.15:0,45,629	0/0:18,0:18:54.13:0,54,701	0/0:31,0:31:90.29:0,90,1244	0/0:33,0:33:96.32:0,96,1331	1/1:0,32:32:90.31:1436,90,0	1/1:0,18:18:45.15:719,45,0	1/1:0,39:39:96.15:1534,96,0	1/1:0,35:35:96.33:1534,96,0	0/0:34,0:34:99:0,102,1389	0/0:46,0:46:99:0,138,1929	0/0:35,0:35:99:0,105,1416	0/0:27,0:27:78.23:0,78,1070	1/1:0,21:21:63.21:1007,63,0	0/0:23,0:23:69.23:0,69,963	0/0:29,0:29:84.24:0,84,1153	0/0:55,0:54:99:0,153,2104	1/1:0,27:27:69.13:1071,69,0	1/1:0,20:20:56.86:911,57,0	1/1:0,36:36:99:1678,105,0	1/1:0,26:26:72.25:1151,72,0	0/0:23,0:23:69.23:0,69,965	0/0:32,0:32:96.30:0,96,1318	0/0:15,0:15:45.15:0,45,629
chr10	73976117	.	A	AG	3947.96	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=14.792;DP=753;FS=8.912;HRun=0;HaplotypeScore=82.5931;InbreedingCoeff=1.0000;MQ=87.58;MQ0=0;MQRankSum=-2.480;QD=34.94;ReadPosRankSum=3.704;VQSLOD=2.8839;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:39:95.30:1280,95,0	0/0:13,0:13:39.13:0,39,544	0/0:31,0:30:78.04:0,78,1109	0/0:24,0:24:64.70:0,65,827	0/0:39,0:39:99:0,117,1625	0/0:35,0:35:99:0,99,1383	0/0:24,0:24:72.22:0,72,986	0/0:27,0:27:78.25:0,78,1072	0/0:33,0:33:99:0,99,1384	1/1:0,26:26:78.25:1064,78,0	1/1:3,20:23:55.56:766,56,0	0/0:15,0:15:42.14:0,42,587	0/0:33,0:33:96.32:0,96,1338	0/0:25,0:25:72.23:0,72,990	0/0:23,0:23:66.22:0,66,921	0/0:23,0:23:69.20:0,69,930	0/0:22,0:22:66.22:0,66,923	0/0:25,0:25:75.25:0,75,1047	0/0:21,0:21:63.19:0,63,848	0/0:32,0:32:96.29:0,96,1304	0/0:38,0:38:99:0,114,1574	0/0:26,0:26:78.26:0,78,1085	0/0:20,0:20:60.20:0,60,839	0/0:39,0:38:99:0,117,1634	1/1:1,24:25:64.09:838,64,0	0/0:31,0:31:93.31:0,93,1300	0/0:28,0:28:84.27:0,84,1157	0/0:13,0:13:39.08:0,39,491
chr10	73977125	.	T	TGGA	8162.85	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-12.881;DP=809;FS=0.000;HRun=0;HaplotypeScore=120.3443;InbreedingCoeff=0.9991;MQ=74.96;MQ0=0;MQRankSum=-3.177;QD=55.53;ReadPosRankSum=2.483;VQSLOD=6.7762;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,154,2499	0/0:10,0:10:27.09:0,27,441	0/0:16,0:16:32.34:0,32,461	0/0:14,0:14:25.87:0,26,370	0/0:25,0:25:72.23:0,72,1145	0/0:26,0:26:72.23:0,72,1141	0/0:32,0:32:81.28:0,81,1318	0/0:47,0:47:99:0,105,1702	0/0:15,0:15:39.13:0,39,637	0/0:36,0:36:96.32:0,96,1546	0/0:15,0:15:39.13:0,39,635	1/1:2,32:36:96.33:2131,96,0	1/1:1,25:26:72.25:1608,72,0	0/0:29,0:29:84.27:0,84,1348	0/0:41,0:41:99:0,123,1935	0/0:35,0:35:96.32:0,96,1545	0/0:44,0:43:99:0,117,1905	0/0:24,0:24:66.22:0,66,1071	0/0:14,0:14:39.13:0,39,633	0/0:43,0:43:99:0,123,2009	0/0:49,0:49:99:0,135,2205	1/1:1,23:25:69.24:1528,69,0	1/1:4,23:28:66.23:1451,66,0	1/1:5,27:32:66.23:1445,66,0	0/0:29,0:29:87.30:0,87,1415	0/0:30,0:30:80.82:0,81,1318	0/0:26,0:25:78.22:0,78,1245	0/0:9,0:9:27.09:0,27,441
chr10	73977352	.	TCATC	T	958.14	PASS	AB=0.840;AC=3;AF=0.056;AN=54;BaseQRankSum=4.634;DP=720;FS=0.000;HRun=0;HaplotypeScore=120.4885;InbreedingCoeff=-0.0639;MQ=55.72;MQ0=22;MQRankSum=-3.703;QD=15.97;ReadPosRankSum=0.545;VQSLOD=3.1332;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,127,2749	0/0:9,0:9:27.09:0,27,723	0/0:25,0:5:6:0,6,51	0/0:31,0:6:14.96:0,15,213	0/0:22,0:22:60.13:0,60,1335	0/0:32,0:32:93.27:0,93,2261	0/0:33,0:33:96.22:0,96,1848	0/0:37,0:36:99:0,99,2033	0/0:23,0:23:66.20:0,66,1600	0/1:12,3:25:99:602,0,217	0/1:14,1:15:73.04:73,0,150	0/0:27,0:27:75.22:0,75,1738	0/0:42,0:42:99:0,123,2798	0/0:26,0:26:78.22:0,78,1766	0/0:29,0:29:87.29:0,87,2191	0/0:28,0:28:84.27:0,84,2091	0/0:23,0:23:69.09:0,69,1414	./.	0/0:19,0:18:54.12:0,54,1035	0/0:35,0:35:99:0,99,2333	0/0:29,0:29:78.25:0,78,1852	0/0:19,0:19:57.10:0,57,1135	0/0:31,0:31:93.12:0,93,1935	0/0:29,0:29:54.29:0,54,1983	0/1:11,9:20:96.59:383,0,97	0/0:27,0:27:78.24:0,78,1907	0/0:28,0:27:81.26:0,81,1933	0/0:8,0:7:21.07:0,21,464
chr10	73977353	.	C	CATCC	1246.16	PASS	AB=0.889;AC=5;AF=0.093;AN=54;BaseQRankSum=8.396;DP=730;FS=2.362;HRun=0;HaplotypeScore=122.9514;InbreedingCoeff=0.1872;MQ=56.45;MQ0=22;MQRankSum=-3.356;QD=14.16;ReadPosRankSum=-0.285;VQSLOD=3.3437;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:92.53:0,93,1731	0/0:9,0:9:27.09:0,27,484	1/1:27,0:6:2.04:6,2,0	0/0:32,0:7:9.01:0,9,86	0/0:23,0:23:59.95:0,60,919	0/0:32,0:32:93.27:0,93,1544	0/0:34,0:34:84.18:0,84,1236	0/0:38,0:37:90.25:0,90,1385	0/0:22,0:22:66.18:0,66,1088	0/1:25,0:25:99:558,0,170	0/1:8,7:16:12.98:347,0,13	0/0:27,0:27:72.18:0,72,1125	0/0:43,0:43:99:0,117,1820	0/0:26,0:26:75.20:0,75,1190	0/0:29,0:29:84.26:0,84,1441	0/0:30,0:30:78.26:0,78,1354	0/0:24,0:24:66.01:0,66,948	./.	0/0:19,0:18:48.06:0,48,709	0/0:35,0:35:96.23:0,96,1505	0/0:29,0:29:75.22:0,75,1223	0/0:20,0:20:54.06:0,54,766	0/0:31,0:31:87.16:0,87,1276	0/0:29,0:29:83.82:0,84,1350	0/1:20,0:20:22.73:440,0,23	0/0:28,0:28:75.23:0,75,1265	0/0:27,0:26:81.24:0,81,1333	0/0:8,0:7:20.96:0,21,302
chr10	73978388	.	GATGCTCACCC	G	2827.11	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.103;DP=710;FS=8.026;HRun=0;HaplotypeScore=216.9799;InbreedingCoeff=0.8429;MQ=58.51;MQ0=1;MQRankSum=-7.894;QD=40.39;ReadPosRankSum=-1.033;VQSLOD=1.6998;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:87.30:0,87,4019	0/0:12,0:12:30.07:0,30,1127	0/0:19,0:17:3.01:0,3,84	0/0:24,0:21:6.49:0,6,119	0/0:16,0:16:27.09:0,27,1273	0/0:23,0:23:36.12:0,36,1728	0/0:18,0:18:33.11:0,33,1549	0/0:27,0:27:3.01:0,3,81	0/0:21,0:21:36.12:0,36,1678	1/1:10,16:26:48.14:1352,48,0	1/1:11,7:18:18.06:495,18,0	0/0:33,0:33:51.16:0,51,1403	0/0:36,0:36:48.12:0,48,1137	0/0:30,0:30:63.19:0,63,2620	0/0:24,0:24:48.16:0,48,2284	0/0:18,0:18:39.13:0,39,1724	0/0:37,0:37:63.22:0,63,2918	0/0:31,0:31:63.20:0,63,2731	0/0:20,0:20:18.06:0,18,788	0/0:22,0:22:36.12:0,36,1597	0/0:43,0:43:69.24:0,69,3251	0/0:22,0:22:28.45:0,28,713	0/0:25,0:25:28.81:0,29,672	0/0:22,0:22:11.74:0,12,329	1/1:13,13:26:39.13:1121,39,0	0/0:29,0:29:42.14:0,42,1842	0/0:20,0:19:33.11:0,33,1547	0/0:14,0:14:27.09:0,27,1338
chr10	73979787	.	T	TCCTC	996.52	PASS	AB=0.958;AC=7;AF=0.125;AN=56;BaseQRankSum=-2.560;DP=460;FS=8.777;HRun=0;HaplotypeScore=75.5378;InbreedingCoeff=0.6725;MQ=59.39;MQ0=4;MQRankSum=0.576;QD=16.61;ReadPosRankSum=-1.046;VQSLOD=1.8329;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:23:76.34:108,0,76	0/0:4,0:3:6.01:0,6,76	0/0:19,0:11:5.16:0,5,92	0/0:22,0:11:11.08:0,11,89	0/0:17,0:17:27.08:0,27,423	0/0:18,0:18:36.01:0,36,438	0/0:29,0:29:57.12:0,57,798	0/0:18,0:17:18:0,18,245	0/0:16,0:16:36.01:0,36,513	1/1:7,8:16:30.04:530,30,0	1/1:4,7:11:18.01:351,18,0	0/0:16,0:16:36.01:0,36,425	0/0:19,0:19:45.04:0,45,611	0/0:27,0:27:54.10:0,54,787	0/0:13,0:13:30.07:0,30,408	0/0:15,0:15:36.09:0,36,522	0/0:17,0:19:38.93:0,39,481	0/0:11,0:11:8.96:0,9,83	0/0:10,0:10:8.70:0,9,110	0/0:10,0:10:24.05:0,24,367	0/0:31,0:31:75.22:0,75,1209	0/0:13,0:13:24.03:0,24,324	0/0:14,0:14:27.08:0,27,420	0/0:13,0:13:24.03:0,24,363	1/1:5,5:10:6.02:147,6,0	0/0:25,0:25:57.11:0,57,780	0/0:17,0:17:36.11:0,36,571	0/0:4,0:3:6.02:0,6,96
chr10	73979811	.	CCCTTCCTTCCTTGTGT	C	321.07	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.081;DP=463;FS=5.407;HRun=0;HaplotypeScore=194.3323;InbreedingCoeff=0.7068;MQ=64.08;MQ0=2;MQRankSum=-3.226;QD=32.11;ReadPosRankSum=-0.529;VQSLOD=2.6535;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:56.32:0,56,2692	0/0:3,0:3:9.03:0,9,572	0/0:21,0:19:47.36:0,47,2432	0/0:17,0:12:24.03:0,24,895	0/0:13,0:13:33.11:0,33,1830	0/0:18,0:18:45.15:0,45,3162	0/0:33,0:33:90.31:0,90,5833	0/0:16,0:16:27.09:0,27,1835	0/0:17,0:17:45.15:0,45,2988	0/0:18,0:18:48.16:0,48,3321	0/0:11,0:11:33.11:0,33,2375	0/0:16,0:16:42.14:0,42,2797	0/0:18,0:18:42.12:0,42,2709	0/0:22,0:22:63.22:0,63,4607	0/0:18,0:18:54.19:0,54,3799	0/0:16,0:16:42.14:0,42,2641	0/0:22,0:22:51.18:0,51,3416	1/1:3,7:10:9.03:404,9,0	0/0:13,0:13:33.11:0,33,2102	0/0:12,0:12:33.10:0,33,1937	0/0:35,0:35:93.28:0,93,5635	0/0:10,0:10:18.06:0,18,1216	0/0:12,0:12:27.09:0,27,1936	0/0:20,0:20:54.19:0,54,3889	0/0:4,0:4:9.03:0,9,694	0/0:27,0:27:66.23:0,66,4489	0/0:16,0:16:48.16:0,48,3182	0/0:2,0:2:3.01:0,3,121
chr10	73981085	.	A	ATATTAT	555.90	PASS	AC=16;AF=0.308;AN=52;BaseQRankSum=5.812;DP=163;FS=3.285;HRun=0;HaplotypeScore=48.4692;InbreedingCoeff=0.7036;MQ=51.25;MQ0=2;MQRankSum=-3.393;QD=17.37;ReadPosRankSum=-1.985;VQSLOD=1.7396;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:12.02:0,12,240	0/0:3,0:3:9.03:0,9,195	0/0:7,0:4:7.68:0,8,145	./.	0/0:3,0:3:9.03:0,9,195	0/0:6,0:6:18.05:0,18,349	0/0:1,0:1:3.01:0,3,65	0/0:13,0:13:36.11:0,36,718	0/0:3,0:3:8.96:0,9,148	1/1:4,0:4:5.97:72,6,0	1/1:3,0:3:5.23:44,5,0	1/1:1,2:4:3.01:35,3,0	1/1:0,2:2:6.02:171,6,0	0/0:1,0:1:3.01:0,3,65	0/0:1,0:1:3.01:0,3,65	0/0:5,0:5:9.03:0,9,195	0/0:17,0:16:42.14:0,42,906	1/1:7,0:7:10.05:89,10,0	0/0:10,0:9:24.07:0,24,481	0/0:7,0:7:18.03:0,18,294	0/0:5,0:4:12.04:0,12,260	1/1:3,0:3:4.40:18,4,0	1/1:0,5:5:12.04:201,12,0	./.	1/1:1,0:4:8.86:93,9,0	0/0:11,0:11:27.06:0,27,485	0/0:6,0:6:18.04:0,18,329	0/0:7,0:7:11.81:0,12,258
chr10	73983188	.	CGTGT	C	1280.30	PASS	AB=0.863;AC=27;AF=0.563;AN=48;BaseQRankSum=4.931;DP=556;FS=37.843;HRun=0;HaplotypeScore=86.1516;InbreedingCoeff=0.4972;MQ=63.83;MQ0=9;MQRankSum=0.385;QD=3.72;ReadPosRankSum=2.046;VQSLOD=0.0246;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:20:1.82:5,2,0	1/1:6,3:9:5.23:53,5,0	./.	./.	0/0:14,0:14:9.02:0,9,138	1/1:22,0:21:5.59:37,6,0	0/1:14,0:14:16.99:17,0,58	0/0:19,0:19:3.44:0,3,21	1/1:12,3:16:3.01:46,3,0	0/0:13,0:13:9.46:0,9,92	0/0:11,0:11:2.74:0,3,12	0/0:25,0:25:12:0,12,144	0/0:19,0:19:24:0,24,320	1/1:14,7:21:15.04:212,15,0	1/1:13,2:19:12.03:148,12,0	1/1:18,8:27:12.03:167,12,0	1/1:24,13:36:15.05:231,15,0	0/1:20,8:28:4.96:195,0,5	1/1:12,2:13:3.01:46,3,0	./.	1/1:57,10:67:9.92:116,10,0	0/0:13,0:12:12.02:0,12,191	0/0:12,0:12:12.02:0,12,186	0/0:20,0:20:21.07:0,21,381	1/1:10,3:13:3.01:46,3,0	1/1:14,2:16:0.07:41,0,0	0/1:15,3:19:3.07:84,0,3	./.
chr10	73983579	.	CATATATATATATATATATAT	C	854.10	PASS	AB=1.000;AC=9;AF=0.375;AN=24;BaseQRankSum=3.276;DP=104;FS=3.799;HRun=0;HaplotypeScore=57.1748;InbreedingCoeff=0.4344;MQ=73.13;MQ0=3;MQRankSum=-2.333;QD=29.45;ReadPosRankSum=0.825;VQSLOD=1.6298;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:9:12.04:290,12,0	0/0:1,0:1:3.01:0,3,50	./.	0/0:9,0:4:5.42:0,5,26	./.	0/0:1,0:1:3:0,3,25	./.	0/0:9,0:9:6:0,6,54	./.	./.	./.	./.	1/1:2,3:5:6.02:322,6,0	./.	./.	0/0:4,0:4:6.02:0,6,442	0/0:11,0:12:21.07:0,21,1389	0/1:7,0:7:13.96:48,0,14	./.	./.	./.	./.	1/1:4,0:5:3.01:140,3,0	1/1:2,1:3:3.01:161,3,0	./.	./.	./.	0/0:7,0:7:12.02:0,12,634
chr10	73983813	.	G	GA	1700.34	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=0.149;DP=404;FS=4.632;HRun=1;HaplotypeScore=55.7538;InbreedingCoeff=0.8859;MQ=73.60;MQ0=1;MQRankSum=-8.736;QD=25.76;ReadPosRankSum=2.043;VQSLOD=3.5908;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:63.06:0,63,793	0/0:2,0:2:6.02:0,6,84	0/0:26,0:20:55.69:0,56,620	0/0:24,0:16:25.82:0,26,345	0/0:8,0:8:21.06:0,21,275	0/0:14,0:13:39.12:0,39,520	0/0:27,0:27:78.19:0,78,1005	0/0:22,0:21:38.15:0,38,492	0/0:11,0:11:30.07:0,30,371	0/0:12,0:12:30.07:0,30,360	0/0:2,0:2:5.89:0,6,57	1/1:3,13:16:45.09:614,45,0	1/1:0,20:20:39.12:565,39,0	0/0:15,0:15:45.14:0,45,611	0/0:13,0:13:39.11:0,39,522	0/0:18,0:18:51.14:0,51,664	0/0:17,0:17:51.11:0,51,650	1/1:2,3:5:12.04:175,12,0	0/0:17,0:17:50.95:0,51,659	0/0:9,0:9:27.06:0,27,323	0/0:36,0:36:99:0,99,1256	1/1:0,2:2:3.01:44,3,0	1/1:0,12:12:21.07:304,21,0	1/1:2,9:11:12.04:174,12,0	0/0:7,0:7:21.04:0,21,260	0/0:16,0:16:45.14:0,45,598	0/0:14,0:14:36.12:0,36,495	0/0:2,0:2:6.02:0,6,84
chr10	73984600	.	AACACACACACACACACACACAC	A	2445.82	PASS	AB=0.958;AC=7;AF=0.130;AN=54;BaseQRankSum=6.801;DP=530;FS=14.645;HRun=0;HaplotypeScore=249.2793;InbreedingCoeff=0.7307;MQ=65.95;MQ0=21;MQRankSum=-4.257;QD=31.76;ReadPosRankSum=1.544;VQSLOD=0.8608;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:24:12.04:0,12,383	0/0:7,0:7:9.03:0,9,644	./.	0/0:42,0:19:9.03:0,9,155	0/0:22,0:22:39.13:0,39,3173	0/0:22,0:22:21.54:0,22,1726	0/0:15,0:16:18.06:0,18,1010	0/0:23,0:23:27.09:0,27,1035	0/0:8,0:8:9.03:0,9,653	1/1:10,3:12:9.02:382,9,0	1/1:13,11:25:27.04:1249,27,0	0/0:9,0:13:12.51:0,13,1025	0/0:12,0:12:27.09:0,27,2336	0/0:18,0:18:24.08:0,24,1920	0/0:21,0:20:33.10:0,33,2341	0/0:19,0:18:27.09:0,27,1782	0/0:24,0:31:42.62:0,43,2736	0/0:16,0:18:33.11:0,33,2723	0/0:18,0:17:18.06:0,18,1112	0/0:15,0:17:21.07:0,21,1226	0/0:21,0:20:20.88:0,21,1427	0/0:10,0:9:18.34:0,18,1236	0/0:13,0:12:18.06:0,18,1653	0/0:18,0:17:24.06:0,24,1512	1/1:11,3:15:15.05:827,15,0	0/1:22,1:23:99:128,0,3333	0/0:14,0:14:25.90:0,26,1801	0/0:7,0:8:14.08:0,14,1130
chr10	73984819	.	T	TA	5689.04	PASS	AB=0.533;AC=13;AF=0.232;AN=56;BaseQRankSum=-13.528;DP=641;FS=4.747;HRun=4;HaplotypeScore=59.8217;InbreedingCoeff=0.8992;MQ=83.06;MQ0=0;MQRankSum=-1.338;QD=36.47;ReadPosRankSum=3.226;VQSLOD=5.2602;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,37:38:99:1477,108,0	0/0:10,0:10:30.09:0,30,340	0/0:20,0:20:42.08:0,42,462	0/0:20,0:20:46.93:0,47,505	0/0:32,0:32:87.25:0,87,987	0/0:22,0:22:63.18:0,63,714	0/0:18,0:18:54.12:0,54,592	0/0:28,0:28:75.20:0,75,843	0/0:17,0:17:48.12:0,48,534	0/0:30,0:30:90.26:0,90,1021	0/0:25,0:25:69.20:0,69,782	1/1:1,21:22:60.20:821,60,0	1/1:1,21:22:63.21:862,63,0	0/0:27,0:27:75.21:0,75,850	0/0:31,0:31:84.24:0,84,949	0/0:23,0:23:66.19:0,66,749	0/0:26,0:26:75.21:0,75,851	0/1:2,14:16:25.94:450,0,26	0/0:25,0:25:75.21:0,75,845	0/0:28,0:28:84.21:0,84,933	0/0:24,0:24:60.17:0,60,681	1/1:0,16:16:45.15:616,45,0	1/1:2,25:27:69.22:930,69,0	1/1:1,14:15:39.13:533,39,0	0/0:22,0:22:66.19:0,66,749	0/0:31,0:31:87.24:0,87,978	0/0:19,0:19:54.10:0,54,589	0/0:7,0:7:21.06:0,21,238
chr10	73991773	.	TGTCAA	T	5351.12	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.053;DP=573;FS=8.960;HRun=0;HaplotypeScore=107.8604;InbreedingCoeff=0.9990;MQ=79.75;MQ0=0;MQRankSum=-6.334;QD=58.80;ReadPosRankSum=3.302;VQSLOD=5.2723;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:27.09:0,27,846	0/0:9,0:9:27.08:0,27,777	0/0:17,0:17:48.16:0,48,1418	0/0:14,0:14:33.24:0,33,966	0/0:30,0:30:84.29:0,84,2571	0/0:17,0:17:48.16:0,48,1447	0/0:27,0:27:78.27:0,78,2388	0/0:34,0:34:96.32:0,96,2728	0/0:14,0:14:42.14:0,42,1237	0/0:25,0:25:75.26:0,75,2279	0/0:19,0:19:57.18:0,57,1690	1/1:1,24:25:72.25:1528,72,0	1/1:0,13:13:39.13:831,39,0	0/0:17,0:17:51.18:0,51,1582	0/0:21,0:21:63.22:0,63,1910	0/0:22,0:22:66.23:0,66,2061	0/0:24,0:24:72.19:0,72,2073	1/1:3,21:24:60.12:1231,60,0	0/0:20,0:20:57.18:0,57,1695	0/0:35,0:35:99:0,105,3146	0/0:22,0:22:66.23:0,66,2005	1/1:1,8:9:27.09:552,27,0	1/1:1,10:11:30.10:638,30,0	1/1:0,9:9:27.09:572,27,0	0/0:26,0:26:78.27:0,78,2291	0/0:31,0:31:93.32:0,93,2860	0/0:27,0:27:78.27:0,78,2331	0/0:20,0:20:60.21:0,60,1879
chr10	73991837	.	TA	T	2626.92	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.695;DP=568;FS=1.834;HRun=9;HaplotypeScore=63.6844;InbreedingCoeff=0.9907;MQ=67.33;MQ0=0;MQRankSum=-2.507;QD=20.21;ReadPosRankSum=2.482;VQSLOD=4.3751;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:48.03:439,48,0	0/0:5,0:5:15.04:0,15,169	0/0:11,0:11:24.04:0,24,254	0/0:11,0:8:11.98:0,12,122	0/0:31,0:31:78.23:0,78,900	0/0:16,0:16:42.12:0,42,485	0/0:23,0:23:63.17:0,63,717	0/0:39,0:39:96.27:0,96,1091	0/0:14,0:14:39.11:0,39,441	0/0:22,0:23:69.03:0,69,769	0/0:20,0:20:48.14:0,48,546	1/1:3,18:21:54.02:494,54,0	1/1:2,15:17:45.02:412,45,0	0/0:10,0:10:30.09:0,30,346	0/0:20,0:20:45.13:0,45,519	0/0:27,0:27:69.15:0,69,771	0/0:24,0:24:60.12:0,60,667	1/1:6,17:23:48.01:439,48,0	0/0:27,0:27:69.20:0,69,796	0/0:30,0:30:78.22:0,78,891	0/0:10,0:10:30.09:0,30,346	1/1:3,13:16:36.01:329,36,0	1/1:4,15:19:48.02:439,48,0	1/1:3,11:14:30.01:273,30,0	0/0:18,0:18:48.14:0,48,554	0/0:37,0:37:99:0,105,1212	0/0:31,0:30:84.25:0,84,969	0/0:11,0:11:30.09:0,30,346
chr10	73992737	.	A	AGCACCCT	5837.47	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-6.967;DP=655;FS=2.498;HRun=0;HaplotypeScore=151.3058;InbreedingCoeff=0.9625;MQ=76.52;MQ0=0;MQRankSum=-11.089;QD=47.46;ReadPosRankSum=0.036;VQSLOD=4.6072;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:63.22:0,63,1443	0/0:11,0:11:30.10:0,30,677	0/0:20,0:20:21.55:0,22,460	0/0:23,0:24:44.21:0,44,745	0/0:19,0:19:45.15:0,45,1020	0/0:21,0:21:45.15:0,45,1033	0/0:22,0:22:42.12:0,42,892	0/0:25,0:25:36.12:0,36,791	0/0:26,0:26:54.19:0,54,1214	0/0:21,0:21:42.14:0,42,929	0/0:6,0:6:6.02:0,6,131	1/1:12,18:32:57.05:2075,57,0	1/1:7,23:30:55.54:1979,56,0	0/0:25,0:25:60.19:0,60,1348	0/0:22,0:22:54.19:0,54,1202	0/0:19,0:19:45.15:0,45,1046	0/0:20,0:20:48.16:0,48,1096	0/0:45,0:45:99:0,105,2275	0/0:17,0:17:21.07:0,21,473	0/0:15,0:15:39.13:0,39,861	0/0:52,0:52:99:0,120,2676	1/1:10,8:18:12.04:446,12,0	1/1:10,10:21:18.06:667,18,0	1/1:7,12:22:17.70:670,18,0	0/0:22,0:22:54.18:0,54,1159	0/0:27,0:27:57.19:0,57,1226	0/0:31,0:30:69.24:0,69,1590	0/0:8,0:8:24.08:0,24,562
chr10	73994669	.	C	CA	1500.71	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.815;DP=839;FS=2.154;HRun=3;HaplotypeScore=93.6948;InbreedingCoeff=0.9917;MQ=74.08;MQ0=0;MQRankSum=-3.939;QD=36.60;ReadPosRankSum=1.913;VQSLOD=4.0071;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:41:99:1596,114,0	0/0:11,0:11:33.10:0,33,396	0/0:17,0:17:51.13:0,51,579	0/0:15,0:14:39.45:0,39,423	0/0:32,0:32:93.27:0,93,1103	0/0:26,0:26:75.23:0,75,899	0/0:28,0:28:81.25:0,81,971	0/0:28,0:28:72.22:0,72,864	0/0:26,0:26:75.20:0,75,875	0/0:43,0:42:99:0,120,1426	0/0:28,0:28:81.25:0,81,971	0/0:33,0:33:99:0,99,1178	0/0:44,0:44:99:0,129,1536	0/0:45,0:45:99:0,132,1566	0/0:46,0:46:99:0,132,1561	0/0:24,0:23:63.19:0,63,756	0/0:36,0:36:87.22:0,87,1016	0/0:26,0:26:78.19:0,78,908	0/0:13,0:13:39.09:0,39,443	0/0:30,0:30:84.25:0,84,996	0/0:33,0:33:93.29:0,93,1115	0/0:22,0:22:66.20:0,66,792	0/0:41,0:41:99:0,114,1361	0/0:31,0:31:84.26:0,84,1007	0/0:37,0:37:99:0,105,1259	0/0:40,0:40:99:0,120,1412	0/0:37,0:36:99:0,111,1331	0/0:6,0:6:18.06:0,18,216
chr10	73994696	.	TAAAC	T	3641.43	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.387;DP=766;FS=4.850;HRun=0;HaplotypeScore=130.0995;InbreedingCoeff=0.9734;MQ=67.42;MQ0=1;MQRankSum=-1.099;QD=36.78;ReadPosRankSum=2.330;VQSLOD=4.0024;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:87.09:0,87,1996	0/0:10,0:10:27.09:0,27,672	0/0:21,0:19:29.23:0,29,704	0/0:13,0:11:9.03:0,9,177	0/0:28,0:28:72.24:0,72,1740	0/0:24,0:24:60.20:0,60,1403	0/0:25,0:25:51.15:0,51,1169	0/0:25,0:25:57.19:0,57,1299	0/0:26,0:26:66.23:0,66,1591	1/1:6,32:37:93.25:1463,93,0	1/1:3,23:26:57.11:928,57,0	0/0:32,0:32:78.27:0,78,1886	0/0:39,0:39:93.28:0,93,2199	0/0:34,0:34:81.23:0,81,1781	0/0:45,0:45:99:0,112,2676	0/0:20,0:20:54.19:0,54,1292	0/0:31,0:31:66.23:0,66,1562	0/0:22,0:22:60.21:0,60,1465	0/0:17,0:17:30.09:0,30,662	0/0:30,0:30:72.15:0,72,1598	0/0:24,0:24:60.13:0,60,1381	0/0:19,0:19:48.15:0,48,1110	0/0:33,0:33:72.22:0,72,1667	0/0:27,0:27:60.21:0,60,1463	1/1:6,29:35:78.11:1250,78,0	0/0:37,0:37:93.28:0,93,2080	0/0:36,0:35:99:0,99,2378	0/0:7,0:7:15.05:0,15,373
chr10	73997653	.	ACTTTT	A	5185.70	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.935;DP=637;FS=6.185;HRun=0;HaplotypeScore=122.3808;InbreedingCoeff=0.9581;MQ=81.10;MQ0=0;MQRankSum=-3.298;QD=48.02;ReadPosRankSum=2.857;VQSLOD=4.8094;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,160,4672	0/0:6,0:6:18.06:0,18,515	0/0:18,0:18:48.16:0,48,1448	0/0:20,0:20:50.91:0,51,1523	0/0:33,0:33:99:0,99,2983	0/0:18,0:18:51.18:0,51,1495	0/0:27,0:27:81.28:0,81,2510	0/0:24,0:23:54.19:0,54,1602	0/0:21,0:21:57.20:0,57,1709	0/0:26,0:26:75.25:0,75,2256	0/0:18,0:18:51.18:0,51,1500	1/1:0,31:31:75.26:1547,75,0	1/1:0,27:27:69.23:1396,69,0	0/0:32,0:32:93.30:0,93,2691	0/0:26,0:26:78.27:0,78,2419	0/0:28,0:28:75.25:0,75,2205	0/0:22,0:22:66.23:0,66,1991	0/0:21,0:21:57.20:0,57,1730	0/0:13,0:13:39.13:0,39,1170	0/0:19,0:19:57.20:0,57,1767	0/0:30,0:30:90.26:0,90,2639	1/1:1,21:22:54.18:1106,54,0	1/1:2,8:10:24.08:448,24,0	1/1:2,16:18:33.58:689,34,0	0/0:26,0:26:78.27:0,78,2334	0/0:21,0:21:57.20:0,57,1699	0/0:24,0:24:69.21:0,69,2001	0/0:1,0:1:3.01:0,3,93
chr10	73997796	.	CAGCAAATT	C	1366.33	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.389;DP=747;FS=1.796;HRun=0;HaplotypeScore=181.7788;InbreedingCoeff=0.9999;MQ=84.54;MQ0=0;MQRankSum=-7.693;QD=37.95;ReadPosRankSum=0.071;VQSLOD=3.5264;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,28:36:63.22:1461,63,0	0/0:16,0:16:42.13:0,42,1701	0/0:25,0:25:60.16:0,60,2197	0/0:22,0:22:57.19:0,57,1926	0/0:40,0:40:99:0,114,4835	0/0:28,0:28:84.27:0,84,3400	0/0:31,0:31:81.26:0,81,3294	0/0:34,0:34:81.27:0,81,3227	0/0:22,0:22:60.21:0,60,2599	0/0:25,0:25:69.22:0,69,2781	0/0:14,0:14:42.14:0,42,1790	0/0:38,0:38:96.33:0,96,3927	0/0:23,0:23:60.21:0,60,2588	0/0:29,0:29:81.26:0,81,3401	0/0:26,0:26:75.26:0,75,3192	0/0:33,0:33:96.30:0,96,3893	0/0:23,0:23:57.18:0,57,2208	0/0:24,0:24:72.23:0,72,2967	0/0:18,0:18:45.15:0,45,1846	0/0:21,0:21:57.17:0,57,2124	0/0:32,0:32:93.32:0,93,4028	0/0:20,0:20:60.20:0,60,2416	0/0:26,0:26:66.23:0,66,2611	0/0:25,0:25:75.25:0,75,3144	0/0:30,0:30:87.30:0,87,3645	0/0:31,0:31:90.29:0,90,3304	0/0:34,0:34:99:0,99,4070	0/0:21,0:21:57.20:0,57,2336
chr10	74003342	.	TTGTTC	T	4003.46	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.310;DP=690;FS=11.002;HRun=0;HaplotypeScore=129.0257;InbreedingCoeff=0.9962;MQ=74.67;MQ0=2;MQRankSum=-3.809;QD=34.81;ReadPosRankSum=3.363;VQSLOD=3.0477;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:87.21:0,87,2373	0/0:11,0:11:30.10:0,30,839	0/0:41,0:39:61.37:0,61,1300	0/0:42,0:37:46.61:0,47,1101	0/0:19,0:19:48.13:0,48,1267	0/0:18,0:18:39.12:0,39,1056	0/0:19,0:19:51.16:0,51,1371	0/0:39,0:39:75.23:0,75,1745	0/0:25,0:25:75.24:0,75,1895	0/0:38,0:38:99:0,105,2807	0/0:13,0:13:33.10:0,33,904	1/1:0,23:23:51.13:929,51,0	1/1:3,18:21:42.14:777,42,0	0/0:27,0:27:63.20:0,63,1633	0/0:38,0:38:99:0,105,2544	0/0:28,0:28:72.18:0,72,1719	0/0:38,0:38:99:0,99,2604	1/1:2,18:20:27.05:485,27,0	0/0:22,0:22:51.16:0,51,1279	0/0:15,0:15:42.14:0,42,1136	0/0:28,0:28:75.19:0,75,1871	1/1:0,11:11:33.06:575,33,0	1/1:4,11:15:33.11:620,33,0	1/1:6,19:25:32.65:617,33,0	0/0:29,0:29:63.22:0,63,1746	0/0:22,0:22:60.20:0,60,1549	0/0:22,0:22:60.19:0,60,1651	0/0:7,0:7:15.05:0,15,438
chr10	74005432	.	ACG	A	2760.31	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=7.767;DP=635;FS=0.893;HRun=0;HaplotypeScore=102.4827;InbreedingCoeff=0.9582;MQ=72.27;MQ0=1;MQRankSum=-4.039;QD=19.72;ReadPosRankSum=2.008;VQSLOD=3.8002;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:92.61:0,93,1246	0/0:19,0:19:48:0,48,607	1/1:11,0:11:2.84:14,3,0	./.	0/0:24,0:24:63.57:0,64,910	0/0:17,0:17:36.11:0,36,548	0/0:32,0:32:77.78:0,78,1021	0/0:21,0:21:41.88:0,42,523	0/0:16,0:16:31.39:0,31,634	0/0:37,0:37:96.08:0,96,1339	0/0:10,0:10:17.78:0,18,205	1/1:10,9:19:42.12:517,42,0	1/1:12,6:18:39.06:450,39,0	0/0:33,0:33:47.21:0,47,1021	0/0:24,0:24:66.21:0,66,1045	0/0:27,0:27:59.92:0,60,878	0/0:30,0:30:81.11:0,81,1178	1/1:20,6:26:59.31:618,59,0	0/0:20,0:20:31.62:0,32,465	0/0:17,0:17:39.01:0,39,556	0/0:36,0:35:93.10:0,93,1315	1/1:12,6:18:30.05:336,30,0	1/1:9,9:18:45.04:533,45,0	1/1:16,14:30:41.86:481,42,0	0/0:22,0:21:42.02:0,42,565	0/0:31,0:31:23.40:0,23,885	0/0:21,0:20:53.10:0,53,749	0/0:6,0:6:11.24:0,11,122
chr10	74005455	.	GAC	G	1368.29	PASS	AB=0.868;AC=16;AF=0.286;AN=56;BaseQRankSum=9.171;DP=699;FS=0.987;HRun=0;HaplotypeScore=132.9822;InbreedingCoeff=0.0796;MQ=55.08;MQ0=6;MQRankSum=-2.552;QD=3.91;ReadPosRankSum=1.676;VQSLOD=2.4117;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,6:42:31.86:0,32,887	0/0:19,0:18:30.08:0,30,438	0/0:8,0:3:3:0,3,25	0/0:11,0:4:6.27:0,6,50	0/0:28,1:29:60.17:0,60,876	0/0:17,1:18:7.83:0,8,550	0/1:31,2:33:39.74:40,0,759	0/0:25,0:25:25.73:0,26,393	0/0:25,0:26:20.57:0,21,728	0/0:18,0:39:76.48:0,76,688	0/0:6,0:11:12.01:0,12,123	0/1:14,10:25:27.79:240,0,28	1/1:8,16:25:38.73:395,39,0	0/1:38,0:38:53.22:53,0,783	0/1:28,1:30:2.61:3,0,968	0/0:24,2:26:25.87:0,26,838	0/0:26,2:28:3.16:0,3,907	0/0:31,0:31:33.78:0,34,249	0/1:13,3:15:46.84:47,0,199	0/1:19,1:20:7.26:7,0,312	0/1:52,3:54:46.88:47,0,1719	1/1:9,8:17:15.04:171,15,0	0/1:11,9:21:20.62:196,0,21	1/1:18,15:34:26.49:297,26,0	0/0:6,0:15:27.02:0,27,276	0/1:26,4:32:31.61:32,0,727	0/0:17,0:17:1.86:0,2,471	0/1:3,0:4:7.39:7,0,27
chr10	74009264	.	C	CAAA	2505.67	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=9.037;DP=554;FS=6.252;HRun=9;HaplotypeScore=97.3696;InbreedingCoeff=0.9269;MQ=69.65;MQ0=8;MQRankSum=-5.855;QD=24.33;ReadPosRankSum=-3.050;VQSLOD=1.4458;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:96.27:0,96,1196	0/0:10,0:10:27.03:0,27,309	0/0:27,0:22:63.18:0,63,773	0/1:15,0:11:0.06:0,0,227	0/0:22,0:22:56.99:0,57,693	0/0:21,0:21:54.17:0,54,682	0/0:26,0:24:60.13:0,60,758	0/0:30,0:30:78.20:0,78,984	0/0:10,0:10:24.06:0,24,303	0/0:15,0:15:33.09:0,33,416	0/0:14,0:14:33.08:0,33,406	1/1:6,8:18:42.14:739,42,0	1/1:10,14:26:45.15:826,45,0	0/0:19,0:19:45.13:0,45,568	0/0:26,0:26:69.19:0,69,846	0/0:24,0:25:69.14:0,69,852	0/0:23,0:23:66.21:0,66,834	0/0:20,0:17:34.65:0,35,503	0/0:13,0:13:33.06:0,33,417	0/0:23,0:23:54.07:0,54,665	0/0:16,0:16:45.14:0,45,567	1/1:9,5:14:14.65:279,15,0	1/1:8,11:19:33.11:629,33,0	1/1:5,3:9:12.03:203,12,0	0/0:18,0:18:54.11:0,54,649	0/0:26,0:26:63.17:0,63,796	0/0:21,0:21:54.15:0,54,682	0/0:8,0:8:17.71:0,18,227
chr10	74009434	.	C	CT	646.21	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.256;DP=720;FS=1.903;HRun=1;HaplotypeScore=69.9816;InbreedingCoeff=0.9962;MQ=83.51;MQ0=0;MQRankSum=-2.493;QD=35.90;ReadPosRankSum=-0.112;VQSLOD=3.7906;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1466	0/0:12,0:12:36.12:0,36,467	0/0:21,0:21:21.56:0,22,616	0/0:28,0:28:60.52:0,61,699	0/0:32,0:32:96.28:0,96,1216	0/0:20,0:20:60.20:0,60,778	0/0:23,0:23:69.22:0,69,895	0/0:40,0:40:99:0,119,1464	0/0:21,0:21:60.18:0,60,766	0/0:32,0:32:96.30:0,96,1225	0/0:14,0:14:42.14:0,42,545	0/0:22,0:22:63.20:0,63,818	0/0:27,0:27:81.25:0,81,1035	0/0:17,0:17:48.14:0,48,609	0/0:32,0:32:90.28:0,90,1154	0/0:35,0:35:99:0,105,1320	0/0:25,0:25:75.23:0,75,960	1/1:0,18:18:51.15:741,51,0	0/0:19,0:19:54.18:0,54,701	0/0:23,0:23:63.18:0,63,791	0/0:37,0:37:99:0,111,1427	0/0:21,0:21:51.15:0,51,646	0/0:33,0:33:93.30:0,93,1207	0/0:32,0:31:87.27:0,87,1115	0/0:18,0:18:48.15:0,48,611	0/0:35,0:35:99:0,105,1327	0/0:31,0:31:90.27:0,90,1140	0/0:14,0:14:42.14:0,42,545
chr10	74009589	.	A	AC	866.15	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.582;DP=777;FS=1.672;HRun=4;HaplotypeScore=93.4465;InbreedingCoeff=0.9997;MQ=83.18;MQ0=0;MQRankSum=1.091;QD=32.08;ReadPosRankSum=1.941;VQSLOD=4.0293;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,102,1156	0/0:16,0:16:48.12:0,48,534	0/0:30,0:30:79.37:0,79,789	0/0:18,0:18:45.05:0,45,470	0/0:32,0:32:96.21:0,96,1072	0/0:26,0:26:72.20:0,72,817	0/0:26,0:26:75.15:0,75,809	0/0:29,0:29:66.16:0,66,734	0/0:30,0:30:84.19:0,84,918	0/0:34,0:34:96.26:0,96,1074	0/0:16,0:16:42.12:0,42,476	0/0:33,0:33:90.21:0,90,991	0/0:27,0:27:81.21:0,81,901	0/0:24,0:24:72.19:0,72,806	0/0:39,0:39:99:0,114,1273	0/0:23,0:23:63.16:0,63,705	0/0:38,0:38:99:0,114,1293	1/1:2,25:27:54.47:961,54,0	0/0:24,0:23:57.14:0,57,632	0/0:29,0:29:81.23:0,81,917	0/0:31,0:31:87.25:0,87,987	0/0:26,0:26:72.19:0,72,807	0/0:21,0:21:60.11:0,60,652	0/0:34,0:34:99:0,99,1086	0/0:28,0:28:84.22:0,84,942	0/0:28,0:28:84.21:0,84,933	0/0:37,0:37:99:0,111,1229	0/0:11,0:11:33.09:0,33,373
chr10	74009655	.	G	GGGTTGAGGCAGAA	3448.48	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.346;DP=815;FS=24.886;HRun=0;HaplotypeScore=296.7048;InbreedingCoeff=0.9974;MQ=89.26;MQ0=0;MQRankSum=-7.644;QD=76.63;ReadPosRankSum=-1.382;VQSLOD=2.0536;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,14:45:69.24:3448,69,0	0/0:12,0:12:27.09:0,27,955	0/0:34,0:34:72.22:0,72,2130	0/0:31,0:30:31.31:0,31,1079	0/0:27,0:27:63.22:0,63,2306	0/0:18,0:18:36.12:0,36,1305	0/0:32,0:32:78.25:0,78,2637	0/0:31,0:31:63.22:0,63,2092	0/0:28,0:28:69.22:0,69,2337	0/0:33,0:33:72.25:0,72,2427	0/0:19,0:19:42.14:0,42,1400	0/0:47,0:47:99:0,114,4016	0/0:29,0:29:72.23:0,72,2529	0/0:28,0:28:72.25:0,72,2670	0/0:42,0:42:93.29:0,93,3252	0/0:21,0:21:57.19:0,57,1971	0/0:43,0:43:99:0,99,3611	0/0:32,0:32:75.22:0,75,2814	0/0:19,0:19:45.15:0,45,1609	0/0:31,0:31:63.19:0,63,2090	0/0:39,0:39:87.22:0,87,2842	0/0:29,0:29:65.95:0,66,2170	0/0:20,0:20:45.15:0,45,1673	0/0:33,0:33:69.24:0,69,2557	0/0:23,0:23:51.15:0,51,1734	0/0:20,0:20:42.14:0,42,1447	0/0:35,0:35:93.31:0,93,3255	0/0:14,0:14:27.09:0,27,990
chr10	74010076	.	G	GCC	22310.73	PASS	AB=0.943;AC=27;AF=0.482;AN=56;BaseQRankSum=-8.150;DP=849;FS=1.765;HRun=2;HaplotypeScore=98.3846;InbreedingCoeff=0.9293;MQ=83.88;MQ0=3;MQRankSum=-3.497;QD=45.53;ReadPosRankSum=5.342;VQSLOD=4.8909;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,52:55:99:2585,138,0	0/0:11,0:11:33.09:0,33,466	0/0:26,0:26:75.20:0,75,1058	0/0:28,0:28:72.57:0,73,1009	0/0:17,0:17:51.16:0,51,730	0/0:22,0:22:63.21:0,63,927	0/0:25,0:24:72.24:0,72,1058	0/0:48,0:48:99:0,129,1792	0/0:19,0:19:57.18:0,57,818	1/1:1,28:29:87.30:1599,87,0	1/1:0,24:25:63.22:1179,63,0	1/1:2,34:37:96.33:1797,96,0	1/1:0,34:34:96.33:1797,96,0	0/0:28,0:28:81.26:0,81,1172	1/1:0,36:35:81.28:1518,81,0	1/1:2,43:43:99:2078,111,0	1/1:2,40:42:99:2153,117,0	1/1:1,26:28:75.26:1405,75,0	0/0:19,0:19:57.18:0,57,816	0/0:26,0:26:75.24:0,75,1075	0/0:42,0:42:99:0,126,1853	1/1:1,29:31:78.27:1461,78,0	1/1:3,15:18:42.14:786,42,0	1/1:0,47:47:99:2415,129,0	1/1:1,28:29:81.28:1518,81,0	0/1:31,2:33:19.14:19,0,1150	0/0:26,0:26:78.26:0,78,1146	0/0:22,0:22:66.22:0,66,972
chr10	74010301	.	GAGGA	G	9625.65	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=16.623;DP=668;FS=0.325;HRun=0;HaplotypeScore=122.4242;InbreedingCoeff=0.9982;MQ=87.82;MQ0=1;MQRankSum=-8.435;QD=45.84;ReadPosRankSum=4.690;VQSLOD=5.0000;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:34:93.32:1735,93,0	0/0:11,0:11:27.09:0,27,720	0/0:28,0:28:78.26:0,78,1904	0/0:24,0:24:69.13:0,69,1699	0/0:17,0:17:42.12:0,42,956	0/0:22,0:22:60.20:0,60,1482	0/0:32,0:32:90.31:0,90,2346	0/0:27,0:27:78.26:0,78,1973	0/0:17,0:17:48.16:0,48,1278	1/1:1,19:20:53.87:1007,54,0	1/1:1,9:10:24.08:447,24,0	1/1:4,36:40:90.31:1679,90,0	1/1:0,22:22:60.21:1119,60,0	0/0:31,0:31:84.29:0,84,2236	0/0:40,0:40:99:0,108,2824	0/0:28,0:28:84.27:0,84,2103	0/0:36,0:36:99:0,108,2801	1/1:0,22:21:54.19:1008,54,0	0/0:22,0:22:60.21:0,60,1528	0/0:16,0:16:45.15:0,45,1151	0/0:48,0:48:99:0,141,3665	1/1:1,14:15:39.13:727,39,0	1/1:0,9:9:21.04:391,21,0	1/1:2,23:25:60.21:1120,60,0	1/1:3,10:13:21.07:392,21,0	0/0:31,0:31:90.31:0,90,2369	0/0:18,0:17:51.18:0,51,1292	0/0:10,0:10:27.09:0,27,703
chr10	74010931	.	GT	G	1098.85	PASS	AB=0.962;AC=10;AF=0.179;AN=56;BaseQRankSum=7.452;DP=641;FS=4.561;HRun=11;HaplotypeScore=66.8842;InbreedingCoeff=0.7474;MQ=69.65;MQ0=0;MQRankSum=-0.299;QD=8.65;ReadPosRankSum=1.499;VQSLOD=2.5913;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,22:30:21.61:386,22,0	0/0:9,0:10:29.90:0,30,296	0/1:21,0:12:1.61:2,0,130	0/0:19,0:17:0.02:0,0,119	0/0:18,0:20:50.91:0,51,500	0/0:25,1:28:44.15:0,44,612	0/0:21,0:22:56.99:0,57,576	0/0:22,1:24:38.37:0,38,591	0/0:20,0:20:45.08:0,45,459	1/1:5,10:16:29.94:246,30,0	1/1:3,11:14:35.16:277,35,0	0/0:29,0:30:75.91:0,76,784	0/0:28,0:28:72.15:0,72,751	0/0:33,0:33:76.35:0,76,766	0/0:28,0:28:63.16:0,63,672	0/0:35,1:36:71.56:0,72,951	0/0:32,0:32:90.06:0,90,898	0/0:22,0:25:59.80:0,60,595	0/0:30,0:30:65.64:0,66,668	0/0:17,0:18:44.93:0,45,449	0/0:25,1:27:43.52:0,44,617	0/0:17,0:17:45.06:0,45,461	0/0:20,0:20:45.06:0,45,441	0/0:14,0:15:38.92:0,39,391	1/1:4,18:22:15.95:337,16,0	0/1:19,2:24:12.39:12,0,408	0/0:19,0:19:23.66:0,24,442	0/0:11,0:11:27.03:0,27,271
chr10	74011170	.	CCCCGT	C	347.52	PASS	AB=0.993;AC=16;AF=0.286;AN=56;BaseQRankSum=0.308;DP=333;FS=0.000;HRun=0;HaplotypeScore=70.1820;InbreedingCoeff=-0.1769;MQ=58.92;MQ0=13;MQRankSum=-2.307;QD=1.95;ReadPosRankSum=1.073;VQSLOD=1.4199;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:0.94:0,1,2	0/0:2,0:2:3.01:0,3,44	0/1:30,0:14:51.18:51,0,147	0/1:22,0:9:11.19:11,0,188	0/1:13,0:13:7.24:7,0,124	0/1:15,0:13:19.23:19,0,84	0/0:14,0:14:23.42:0,23,276	0/1:13,0:13:34.76:55,0,35	0/1:8,0:8:20.81:21,0,117	0/0:8,0:8:6.95:0,7,31	1/1:11,0:11:2.81:35,3,0	0/0:16,0:15:14.60:0,15,134	0/1:10,1:11:26.62:27,0,109	0/0:12,0:11:6.91:0,7,88	0/0:5,0:5:5.97:0,6,64	0/0:5,0:5:2.90:0,3,16	0/0:11,0:10:8.76:0,9,101	1/1:6,0:6:8.70:101,9,0	0/1:12,0:9:29.12:59,0,29	0/0:7,0:7:6.02:0,6,87	0/0:11,0:11:4.84:0,5,47	0/1:8,0:7:5.71:6,0,120	0/0:8,2:9:17.97:0,18,189	0/0:34,1:35:18.07:0,18,115	0/0:8,0:8:4.07:0,4,12	0/1:10,0:9:53.37:53,0,114	0/1:12,0:12:26.84:27,0,39	0/1:7,0:5:25.87:26,0,78
chr10	74011202	.	GCACGCA	G	785.83	PASS	AB=0.500;AC=5;AF=0.093;AN=54;BaseQRankSum=4.188;DP=387;FS=0.000;HRun=0;HaplotypeScore=86.5084;InbreedingCoeff=0.8066;MQ=58.04;MQ0=9;MQRankSum=-2.239;QD=23.81;ReadPosRankSum=0.863;VQSLOD=2.9425;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:0,10:10:0.03:0,0,0	0/0:4,0:4:12.04:0,12,433	0/0:17,0:3:6.02:0,6,173	0/0:21,0:6:16.76:0,17,288	0/0:9,0:9:21.05:0,21,681	0/0:12,0:11:27.08:0,27,822	0/0:21,0:21:57.20:0,57,2079	0/0:22,0:22:51.09:0,51,1768	0/0:12,0:12:30.10:0,30,1028	1/1:0,11:12:33.11:781,33,0	./.	0/0:16,0:16:39.12:0,39,1315	0/0:20,0:20:48.08:0,48,1559	0/0:7,0:7:21.07:0,21,760	0/0:15,0:15:30.10:0,30,1100	0/0:12,0:11:24.08:0,24,810	0/0:12,0:12:23.82:0,24,877	0/0:9,0:9:21.06:0,21,589	0/0:12,0:10:24.04:0,24,780	0/0:11,0:11:24.01:0,24,788	0/0:17,0:16:36.12:0,36,1302	0/0:12,0:11:27.09:0,27,906	0/0:23,0:22:45.14:0,45,1538	0/0:30,0:30:57.15:0,57,1806	1/1:0,7:11:6.02:115,6,0	0/0:16,0:15:39.12:0,39,1292	0/0:5,0:5:15.05:0,15,537	0/0:8,0:8:21.07:0,21,751
chr10	74011206	.	GCA	G	140.94	PASS	AB=1.000;AC=5;AF=0.093;AN=54;BaseQRankSum=5.708;DP=401;FS=2.574;HRun=0;HaplotypeScore=67.5145;InbreedingCoeff=0.8142;MQ=60.84;MQ0=4;MQRankSum=-2.254;QD=4.27;ReadPosRankSum=0.916;VQSLOD=1.9251;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:10:0.02:0,0,0	0/0:4,0:4:12.04:0,12,232	0/0:18,0:3:6.02:0,6,108	0/0:21,0:7:19.41:0,19,196	0/0:11,0:11:30.09:0,30,528	0/0:11,0:11:27.08:0,27,474	0/0:24,0:24:66.23:0,66,1233	0/0:21,0:21:54.17:0,54,994	0/0:13,0:13:35.90:0,36,611	1/1:11,1:12:32.21:198,32,0	./.	0/0:17,0:17:42.13:0,42,757	0/0:21,0:21:51.12:0,51,889	0/0:10,0:10:30.10:0,30,543	0/0:15,0:15:33.11:0,33,619	0/0:13,0:12:27.07:0,27,455	0/0:13,0:13:26.96:0,27,503	0/0:8,0:8:21.04:0,21,353	0/0:10,0:9:27.09:0,27,499	0/0:15,0:15:35.80:0,36,560	0/0:18,0:17:42.12:0,42,756	0/0:16,0:16:45.10:0,45,697	0/0:22,0:22:45.15:0,45,850	0/0:27,0:27:51.17:0,51,983	1/1:7,4:11:6:53,6,0	0/0:14,1:15:42.14:0,42,777	0/0:7,0:7:20.08:0,20,319	0/0:8,0:8:21.07:0,21,405
chr10	74012502	.	TCA	T	297.52	PASS	AB=0.903;AC=11;AF=0.204;AN=54;BaseQRankSum=2.502;DP=665;FS=0.846;HRun=0;HaplotypeScore=93.2807;InbreedingCoeff=-0.1458;MQ=71.32;MQ0=16;MQRankSum=1.041;QD=1.13;ReadPosRankSum=-0.914;VQSLOD=1.8148;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:6.56:0,7,263	0/0:13,0:13:8.99:0,9,108	./.	0/0:44,0:29:0:0,0,0	0/0:15,0:15:12.01:0,12,155	0/0:22,0:21:17.05:0,17,177	0/1:28,4:32:30.83:31,0,360	0/0:21,0:20:5.70:0,6,30	0/1:27,1:28:8.62:9,0,261	0/0:23,0:23:8.10:0,8,224	0/0:12,0:13:9:0,9,91	0/0:20,0:20:12.46:0,12,102	0/0:21,0:22:12.45:0,12,99	0/1:25,4:29:38.21:38,0,251	0/1:26,5:30:55.84:56,0,342	0/1:20,3:22:67.20:67,0,216	0/1:26,7:33:99:112,0,439	0/0:24,0:26:36.33:0,36,332	0/0:18,0:18:4.48:0,4,118	0/1:13,2:17:47.19:47,0,122	0/1:31,1:31:30.47:30,0,88	0/0:18,0:18:11.79:0,12,99	1/1:16,0:14:1.22:3,1,0	0/0:30,0:30:8.58:0,9,64	0/0:15,0:15:15.50:0,15,179	0/0:22,0:22:16.75:0,17,156	0/1:22,1:23:38.19:38,0,261	0/0:5,0:5:11.07:0,11,134
chr10	74012543	.	C	CACACACAG	1467.47	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=3.197;DP=780;FS=26.610;HRun=0;HaplotypeScore=193.3087;InbreedingCoeff=0.5208;MQ=61.37;MQ0=23;MQRankSum=-0.715;QD=5.30;ReadPosRankSum=-4.715;VQSLOD=0.0148;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:34:16.29:16,0,441	0/0:11,0:11:26.93:0,27,274	0/0:48,0:20:52.60:0,53,559	0/0:43,0:16:37.56:0,38,371	0/0:14,0:13:32.98:0,33,442	0/0:14,0:13:9.48:0,9,215	0/0:30,0:30:65.88:0,66,944	0/0:17,0:17:32.49:0,32,319	0/0:25,0:24:33.03:0,33,589	0/1:19,0:19:57.87:58,0,220	0/1:11,0:11:3.94:4,0,80	1/1:6,32:43:10.19:334,10,0	1/1:3,22:30:9.83:394,10,0	0/0:28,0:28:44.87:0,45,750	0/0:44,0:44:87.45:0,87,1161	0/0:27,0:27:48.72:0,49,696	0/0:37,0:37:76.48:0,76,1207	0/1:24,0:24:99:130,0,224	0/0:19,0:19:12.93:0,13,368	0/0:21,0:21:36.45:0,36,435	0/0:54,0:54:48.58:0,49,841	1/1:22,0:22:32.96:313,33,0	1/1:19,0:16:11.46:95,11,0	1/1:6,27:47:11.73:249,12,0	0/1:26,0:26:53.38:53,0,339	0/0:32,0:32:43.47:0,43,525	0/0:29,0:28:59.74:0,60,800	0/0:10,0:10:26.90:0,27,326
chr10	74014476	.	TG	T	918.07	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.622;DP=615;FS=3.732;HRun=2;HaplotypeScore=61.8417;InbreedingCoeff=0.9877;MQ=87.07;MQ0=0;MQRankSum=-1.056;QD=32.79;ReadPosRankSum=1.143;VQSLOD=3.6779;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,172,2563	0/0:6,0:6:18.06:0,18,270	0/0:21,0:20:56.52:0,57,725	0/0:23,0:23:59.57:0,60,743	0/0:22,0:22:60.20:0,60,897	0/0:29,0:29:87.29:0,87,1301	0/0:25,0:25:72.24:0,72,1075	0/0:29,0:29:84.27:0,84,1223	0/0:13,0:13:39.13:0,39,584	0/0:17,0:17:51.17:0,51,764	0/0:7,0:7:21.07:0,21,315	0/0:31,0:31:93.31:0,93,1379	0/0:24,0:24:72.24:0,72,1077	0/0:25,0:25:72.19:0,72,1032	0/0:22,0:22:66.22:0,66,989	0/0:19,0:19:57.19:0,57,853	0/0:30,0:30:87.29:0,87,1303	1/1:0,28:28:78.25:1013,78,0	0/0:19,0:19:57.19:0,57,852	0/0:12,0:12:36.12:0,36,539	0/0:28,0:28:84.28:0,84,1250	0/0:15,0:15:45.15:0,45,674	0/0:12,0:12:36.12:0,36,540	0/0:27,0:27:78.26:0,78,1164	0/0:15,0:15:39.13:0,39,585	0/0:24,0:24:72.23:0,72,1046	0/0:21,0:20:63.21:0,63,923	0/0:14,0:14:42.14:0,42,629
chr10	74014637	.	CAG	C	3747.35	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.551;DP=660;FS=2.010;HRun=0;HaplotypeScore=82.1025;InbreedingCoeff=0.9986;MQ=87.73;MQ0=0;MQRankSum=-4.222;QD=45.15;ReadPosRankSum=-1.076;VQSLOD=4.4912;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:87.30:1416,87,0	0/0:7,0:7:21.07:0,21,423	0/0:17,0:17:48.14:0,48,898	0/0:29,0:29:77.37:0,77,1469	0/0:18,0:18:54.15:0,54,1022	0/0:29,0:29:84.26:0,84,1633	0/0:30,0:30:90.28:0,90,1755	0/0:30,0:30:90.30:0,90,1787	0/0:20,0:20:60.19:0,60,1182	1/1:0,22:22:63.21:1017,63,0	1/1:0,13:13:33.11:533,33,0	0/0:32,0:32:93.31:0,93,1836	0/0:35,0:35:99:0,105,2055	0/0:22,0:22:63.20:0,63,1233	0/0:35,0:35:99:0,105,2071	0/0:25,0:25:75.24:0,75,1479	0/0:35,0:35:99:0,105,2118	0/0:26,0:26:78.27:0,78,1573	0/0:17,0:17:51.17:0,51,984	0/0:10,0:10:30.10:0,30,609	0/0:31,0:31:93.32:0,93,1866	0/0:20,0:20:60.20:0,60,1174	0/0:19,0:19:57.20:0,57,1131	0/0:28,0:28:84.27:0,84,1670	1/1:0,18:18:48.16:782,48,0	0/0:26,0:26:78.27:0,78,1583	0/0:19,0:18:57.20:0,57,1157	0/0:17,0:17:51.17:0,51,977
chr10	74016813	.	TA	T	2479.44	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.556;DP=693;FS=0.399;HRun=9;HaplotypeScore=75.4145;InbreedingCoeff=0.9517;MQ=70.14;MQ0=0;MQRankSum=0.128;QD=21.01;ReadPosRankSum=2.733;VQSLOD=4.3302;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:87.26:0,87,1004	0/0:11,0:11:33.10:0,33,381	0/0:12,1:13:2.60:0,3,268	0/0:6,0:6:12.50:0,13,131	0/0:38,0:39:99:0,114,1287	0/0:30,0:30:66.17:0,66,742	0/0:17,0:17:45.12:0,45,510	0/0:35,0:35:81.21:0,81,909	0/0:24,0:24:69.19:0,69,786	0/0:3,0:40:99:0,108,575	0/0:4,0:24:51.35:0,51,269	1/1:3,21:24:51.02:467,51,0	1/1:2,28:30:78.03:714,78,0	0/0:28,0:28:69.21:0,69,796	0/0:30,0:30:81.20:0,81,905	0/0:28,0:28:78.21:0,78,880	0/0:11,0:10:33.10:0,33,381	0/0:15,0:15:42.11:0,42,474	0/0:23,0:23:60.18:0,60,693	0/0:29,0:29:84.24:0,84,962	0/0:22,0:22:63.17:0,63,716	1/1:1,20:21:50.98:458,51,0	1/1:2,23:25:56.77:521,57,0	1/1:0,18:18:54.03:494,54,0	0/0:3,0:29:68.29:0,68,351	0/0:36,0:37:93.02:0,93,1018	0/0:37,0:37:93.28:0,93,1073	0/0:11,0:11:33.10:0,33,381
chr10	74017003	.	GAT	G	1310.41	PASS	AB=0.863;AC=5;AF=0.089;AN=56;BaseQRankSum=10.092;DP=834;FS=21.407;HRun=0;HaplotypeScore=164.4975;InbreedingCoeff=-0.0966;MQ=54.92;MQ0=9;MQRankSum=-9.413;QD=9.29;ReadPosRankSum=1.638;VQSLOD=1.6109;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:38,1:31:99:489,0,277	0/0:6,0:6:18.06:0,18,337	0/0:43,0:33:77.39:0,77,1174	0/0:24,0:22:56.91:0,57,872	0/0:30,0:29:75.24:0,75,1336	0/0:23,0:22:66.23:0,66,1211	0/0:39,0:39:99:0,111,1939	0/0:38,0:38:99:0,102,1755	0/0:23,0:23:66.23:0,66,1208	0/1:23,6:26:99:262,0,697	0/1:17,3:19:89.37:107,0,89	0/0:43,0:43:99:0,126,2218	0/0:42,0:42:99:0,106,1845	0/0:28,0:27:81.28:0,81,1454	0/0:32,0:32:93.31:0,93,1694	0/0:26,0:26:75.26:0,75,1373	0/0:30,0:30:60.51:0,61,1524	0/0:28,0:28:75.21:0,75,1334	0/0:21,0:20:56.86:0,57,1026	0/0:19,0:19:57.20:0,57,1043	0/0:63,0:62:99:0,172,3025	0/0:21,0:21:42.04:0,42,914	0/0:24,0:23:60.11:0,60,1077	0/0:34,0:34:71.70:0,72,1289	0/1:26,16:40:99:557,0,576	0/0:34,1:34:99:0,99,1727	0/0:21,0:21:60.21:0,60,1115	0/1:10,1:11:10.58:11,0,491
chr10	74017005	.	T	TGG	2013.36	PASS	AB=0.817;AC=5;AF=0.089;AN=56;BaseQRankSum=8.888;DP=835;FS=17.529;HRun=0;HaplotypeScore=167.3303;InbreedingCoeff=-0.0966;MQ=55.51;MQ0=9;MQRankSum=-9.863;QD=14.18;ReadPosRankSum=1.716;VQSLOD=2.2734;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,27:31:99:757,0,198	0/0:7,0:7:18.06:0,18,294	0/0:42,0:33:77.70:0,78,1157	0/0:25,0:23:60.73:0,61,850	0/0:31,0:30:75.24:0,75,1187	0/0:23,0:22:66.23:0,66,1069	0/0:39,0:39:99:0,111,1740	0/0:37,0:37:99:0,105,1634	0/0:22,0:22:66.23:0,66,1074	0/1:25,6:28:99:450,0,597	0/1:14,5:18:81.64:149,0,82	0/0:43,0:43:99:0,126,1969	0/0:42,0:42:99:0,106,1650	0/0:28,0:27:81.28:0,81,1300	0/0:32,0:32:93.30:0,93,1489	0/0:26,0:26:78.25:0,78,1245	0/0:32,0:32:63.44:0,63,1379	0/0:28,0:28:75.21:0,75,1185	0/0:21,0:20:56.86:0,57,923	0/0:19,0:19:57.19:0,57,925	0/0:60,1:60:99:0,172,2724	0/0:21,0:21:53.92:0,54,831	0/0:24,0:23:60.19:0,60,963	0/0:33,0:33:71.68:0,72,1100	0/1:36,6:40:99:762,0,433	0/0:35,0:34:99:0,99,1537	0/0:21,0:21:60.20:0,60,976	0/1:11,0:11:10.52:11,0,447
chr10	74017027	.	T	TGG	818.99	PASS	AB=0.899;AC=4;AF=0.071;AN=56;BaseQRankSum=8.959;DP=725;FS=5.557;HRun=0;HaplotypeScore=173.6718;InbreedingCoeff=-0.0855;MQ=53.85;MQ0=3;MQRankSum=-7.884;QD=7.58;ReadPosRankSum=-0.194;VQSLOD=2.8355;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,15:25:99:242,0,436	0/0:8,0:8:24.08:0,24,391	0/0:37,0:29:48.45:0,48,1108	0/0:28,0:19:49.79:0,50,739	0/0:20,0:20:48.16:0,48,778	0/0:15,0:15:42.10:0,42,659	0/0:42,0:42:99:0,120,1891	0/0:45,0:45:99:0,123,1906	0/0:18,0:18:54.17:0,54,850	0/1:27,1:27:99:191,0,750	0/1:15,0:15:31.57:32,0,167	0/0:42,0:42:99:0,117,1867	0/0:37,1:38:30.36:0,30,1296	0/0:30,0:30:87.28:0,87,1383	0/0:25,0:25:69.24:0,69,1124	0/0:24,0:24:72.25:0,72,1174	0/0:29,1:30:29.51:0,30,1324	0/0:27,0:27:75.26:0,75,1221	0/0:13,0:13:39.12:0,39,601	0/0:15,0:15:40.38:0,40,634	0/0:44,0:44:99:0,114,1858	0/0:14,0:14:35.86:0,36,548	0/0:18,0:18:27.80:0,28,406	0/0:33,0:33:30.98:0,31,1058	0/1:35,1:36:99:464,0,544	0/0:20,0:20:57.19:0,57,930	0/0:20,0:20:57.19:0,57,915	0/0:11,0:11:1.69:0,2,453
chr10	74017040	.	ATGGG	A	217.54	PASS	AB=0.956;AC=7;AF=0.125;AN=56;BaseQRankSum=9.683;DP=693;FS=0.000;HRun=0;HaplotypeScore=193.6881;InbreedingCoeff=0.3383;MQ=53.17;MQ0=3;MQRankSum=-8.998;QD=1.57;ReadPosRankSum=1.976;VQSLOD=2.7038;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:23:57.22:57,0,91	0/0:8,0:8:24.02:0,24,393	0/0:35,0:28:67.12:0,67,848	0/0:30,0:21:54.25:0,54,914	0/0:17,0:17:42.09:0,42,942	0/0:11,0:11:33.10:0,33,829	0/0:35,0:35:96.22:0,96,1889	0/0:40,0:40:99:0,117,2136	0/0:17,0:17:48.08:0,48,1005	0/1:22,4:25:99:120,0,202	1/1:15,2:17:0.43:13,0,0	0/0:40,0:40:42.35:0,42,1138	0/1:33,0:33:56.84:57,0,479	0/0:27,0:27:72.22:0,72,1794	0/0:23,0:23:66.17:0,66,1509	0/0:24,0:24:69.13:0,69,1411	0/0:30,0:30:67.86:0,68,1720	0/0:26,0:26:50.83:0,51,1022	0/0:16,0:16:48.09:0,48,831	0/0:18,0:17:45.06:0,45,905	0/0:44,0:44:88.88:0,89,2354	0/0:13,0:13:0.17:0,0,202	0/0:18,1:20:13.02:0,13,200	0/0:27,0:27:56.15:0,56,610	1/1:24,10:33:13.90:97,14,0	0/0:23,0:23:66.18:0,66,1506	0/0:17,0:17:48.09:0,48,979	0/0:13,0:13:22.03:0,22,757
chr10	74017044	.	G	GTGGA	3130.03	PASS	AB=0.841;AC=13;AF=0.232;AN=56;BaseQRankSum=5.913;DP=691;FS=0.000;HRun=0;HaplotypeScore=192.6728;InbreedingCoeff=0.2437;MQ=53.11;MQ0=4;MQRankSum=-6.133;QD=12.23;ReadPosRankSum=2.418;VQSLOD=3.1877;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:21:22.07:290,22,0	0/0:8,0:8:6.02:0,6,98	0/0:34,0:26:13.31:0,13,366	0/0:29,0:20:31.38:0,31,423	0/0:16,0:16:33.11:0,33,538	0/0:13,0:13:36.08:0,36,520	0/0:34,0:34:65.22:0,65,981	0/0:44,0:44:58.22:0,58,1043	0/0:17,0:17:39.11:0,39,601	0/1:20,0:23:96.26:379,0,96	1/1:7,0:13:2.88:20,3,0	0/1:24,16:40:30.95:1221,0,31	0/1:26,8:34:99:620,0,105	0/0:25,0:25:66.21:0,66,1053	0/0:24,0:24:57.16:0,57,880	0/0:23,0:23:45.15:0,45,741	0/0:30,0:31:62.62:0,63,973	0/0:26,0:26:28.03:0,28,542	0/0:17,0:17:24.07:0,24,359	0/0:19,0:18:39.06:0,39,574	0/0:43,0:45:92.86:0,93,1392	0/1:12,2:14:14.78:138,0,15	0/1:16,6:22:15.21:188,0,15	1/1:18,8:27:18.92:376,19,0	0/1:29,0:31:27.92:47,0,28	0/1:21,0:22:15.01:15,0,759	0/0:17,0:17:36.10:0,36,555	0/0:13,0:13:27.09:0,27,445
chr10	74017049	.	TGGATG	T	1037.14	PASS	AB=0.819;AC=7;AF=0.125;AN=56;BaseQRankSum=6.608;DP=670;FS=21.236;HRun=0;HaplotypeScore=198.3046;InbreedingCoeff=-0.1493;MQ=52.88;MQ0=7;MQRankSum=-7.445;QD=5.55;ReadPosRankSum=0.153;VQSLOD=0.9882;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:19:33.11:0,33,651	0/0:6,0:6:15.05:0,15,411	0/0:32,0:23:47.64:0,48,1183	0/0:29,0:20:37.04:0,37,1178	0/0:13,0:13:36.12:0,36,1099	0/0:13,0:13:39.13:0,39,1153	0/0:32,0:32:90.31:0,90,2502	0/0:41,0:41:99:0,120,3153	0/0:16,0:16:45.14:0,45,1300	0/1:22,3:24:99:171,0,936	0/0:12,1:13:8.74:0,9,193	0/1:37,4:44:99:257,0,1771	0/1:18,11:29:99:335,0,833	0/0:26,0:26:78.27:0,78,2334	0/0:26,0:26:75.26:0,75,2158	0/0:20,0:20:60.19:0,60,1657	0/0:32,0:32:83.59:0,84,2509	0/1:18,2:23:99:212,0,1112	0/0:18,0:17:45.15:0,45,1151	0/0:18,0:17:45.15:0,45,1300	0/0:45,0:44:99:0,114,3323	0/1:9,3:13:44.15:44,0,284	0/1:18,2:21:48.86:49,0,255	0/0:25,0:26:8.41:0,8,798	0/1:24,7:30:99:100,0,218	0/0:22,0:22:63.22:0,63,1943	0/0:17,0:17:48.16:0,48,1303	0/0:12,0:12:33.58:0,34,962
chr10	74018772	.	ATT	A	2438.33	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.052;DP=563;FS=11.931;HRun=10;HaplotypeScore=87.9177;InbreedingCoeff=0.9744;MQ=71.46;MQ0=1;MQRankSum=-8.758;QD=25.14;ReadPosRankSum=2.524;VQSLOD=2.2191;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:57.12:635,57,0	0/0:6,0:6:18.06:0,18,286	0/0:20,0:20:42.08:0,42,564	0/0:7,0:5:9.50:0,10,134	0/0:27,0:28:78.25:0,78,1184	0/0:27,0:27:78.22:0,78,1170	0/0:21,0:21:60.17:0,60,884	0/0:27,0:29:69.21:0,69,1036	0/0:11,0:11:30.09:0,30,452	1/1:5,24:29:66.17:736,66,0	1/1:4,20:24:60.14:660,60,0	0/0:0,0:18:39.93:0,40,137	0/0:2,0:16:32.44:0,32,112	0/0:21,0:21:57.19:0,57,888	0/0:22,0:22:60.19:0,60,909	0/0:29,0:29:81.26:0,81,1252	0/0:14,0:14:36.12:0,36,570	0/0:1,0:6:12.48:0,12,43	0/0:19,0:20:51.16:0,51,761	0/0:30,0:30:78.27:0,78,1238	0/0:12,0:12:27.08:0,27,408	0/0:4,0:18:29.94:0,30,103	0/0:2,0:14:29.94:0,30,103	0/0:3,0:15:24.65:0,25,85	1/1:4,16:19:51.13:568,51,0	0/0:34,1:35:50.83:0,51,1228	0/0:30,0:30:81.28:0,81,1282	0/0:17,0:17:51.07:0,51,757
chr10	74018797	.	CTT	C	2212.03	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.357;DP=596;FS=4.121;HRun=11;HaplotypeScore=102.4299;InbreedingCoeff=0.9953;MQ=75.58;MQ0=0;MQRankSum=-9.372;QD=21.90;ReadPosRankSum=0.519;VQSLOD=3.2486;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:29:51.03:543,51,0	0/0:9,0:9:27.09:0,27,415	0/0:17,0:21:24.90:0,25,235	0/0:11,1:12:21.06:0,21,234	0/0:29,0:29:72.23:0,72,1086	0/0:25,0:26:77.74:0,78,1141	0/0:22,0:22:63.20:0,63,949	0/0:36,0:36:81.23:0,81,1198	0/0:13,0:13:36.07:0,36,501	1/1:7,20:27:63.13:669,63,0	1/1:1,23:25:59.86:618,60,0	0/0:23,0:24:53.63:0,54,732	0/0:15,0:15:42.13:0,42,623	0/0:19,0:19:51.17:0,51,766	0/0:20,0:20:53.66:0,54,771	0/0:28,0:28:72.22:0,72,1067	0/0:15,0:15:39.13:0,39,600	0/0:2,0:10:20.46:0,20,82	0/0:18,0:19:47.61:0,48,674	0/0:29,0:31:90.28:0,90,1329	0/0:9,0:9:24.08:0,24,370	0/0:12,0:12:27.07:0,27,375	0/0:22,0:23:59.68:0,60,865	0/0:17,0:17:44.97:0,45,690	1/1:1,19:20:51.11:543,51,0	0/0:36,0:37:92.79:0,93,1369	0/0:33,0:35:99:0,101,1424	0/0:9,0:10:23.57:0,24,332
chr10	74021532	.	TTGA	T	3548.77	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.014;DP=725;FS=2.648;HRun=0;HaplotypeScore=104.9348;InbreedingCoeff=0.9982;MQ=83.42;MQ0=0;MQRankSum=-1.392;QD=33.80;ReadPosRankSum=2.861;VQSLOD=4.4858;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,47:52:99:1656,105,0	0/0:8,0:8:24.08:0,24,524	0/0:22,0:22:54.19:0,54,1146	0/0:21,0:21:51.06:0,51,920	0/0:23,0:23:60.21:0,60,1280	0/0:30,0:30:87.30:0,87,1860	0/0:33,0:33:87.30:0,87,1899	0/0:38,0:38:99:0,102,2198	0/0:20,0:20:60.21:0,60,1309	1/1:4,18:22:54.18:847,54,0	1/1:0,10:10:21.07:333,21,0	0/0:28,0:28:81.28:0,81,1733	0/0:24,0:24:72.25:0,72,1570	0/0:40,0:40:99:0,105,2288	0/0:30,0:30:90.31:0,90,1962	0/0:25,0:25:69.22:0,69,1467	0/0:23,0:23:69.24:0,69,1505	0/0:24,0:24:63.22:0,63,1370	0/0:30,0:30:75.26:0,75,1582	0/0:13,0:13:36.12:0,36,787	0/0:52,0:52:99:0,151,3256	0/0:22,0:22:60.21:0,60,1253	0/0:25,0:25:66.23:0,66,1435	0/0:30,0:30:84.29:0,84,1835	1/1:2,19:21:45.14:714,45,0	0/0:30,1:31:36.70:0,37,1686	0/0:15,0:15:42.14:0,42,918	0/0:13,0:13:36.07:0,36,647
chr10	74021877	.	C	CTCAATA	6934.51	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-1.170;DP=671;FS=10.805;HRun=0;HaplotypeScore=142.8267;InbreedingCoeff=0.9723;MQ=88.96;MQ0=0;MQRankSum=-13.594;QD=64.81;ReadPosRankSum=0.099;VQSLOD=5.0187;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,2376	0/0:5,0:5:6.02:0,6,137	0/0:24,0:24:66.23:0,66,1381	0/0:28,0:28:65.06:0,65,1278	0/0:29,0:29:72.25:0,72,1613	0/0:23,0:23:69.24:0,69,1555	0/0:24,0:24:63.19:0,63,1391	0/0:37,0:37:99:0,102,2159	0/0:20,0:20:57.20:0,57,1299	0/0:14,0:14:39.13:0,39,870	0/0:14,0:14:39.13:0,39,890	1/1:4,22:26:63.22:2077,63,0	1/1:4,16:20:51.18:1670,51,0	0/0:24,0:24:69.24:0,69,1549	0/0:26,0:26:75.23:0,75,1644	0/0:30,0:30:66.23:0,66,1488	0/0:26,0:26:72.25:0,72,1621	0/0:27,0:27:69.21:0,69,1508	0/0:19,0:19:48.15:0,48,974	0/0:30,0:30:84.29:0,84,1916	0/0:58,0:58:99:0,157,3466	1/1:4,17:23:42.14:1294,42,0	1/1:1,15:17:36.11:1016,36,0	1/1:4,16:21:33.11:877,33,0	0/0:23,0:23:66.22:0,66,1466	0/0:20,0:20:54.19:0,54,1217	0/0:20,0:20:57.18:0,57,1254	0/0:5,0:5:15.05:0,15,343
chr10	74023006	.	A	AAATCTTT	8756.96	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=1.135;DP=797;FS=1.940;HRun=0;HaplotypeScore=174.6254;InbreedingCoeff=1.0000;MQ=84.04;MQ0=0;MQRankSum=-11.555;QD=77.50;ReadPosRankSum=-1.224;VQSLOD=4.9878;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,18:40:54.14:2045,54,0	0/0:14,0:14:39.10:0,39,867	0/0:36,0:35:96.32:0,96,2326	0/0:18,0:17:45.09:0,45,958	0/0:24,0:24:72.22:0,72,1705	0/0:30,0:30:87.28:0,87,2238	0/0:28,0:28:81.21:0,81,1787	0/0:36,0:36:86.79:0,87,2108	0/0:17,0:17:51.16:0,51,1289	1/1:1,22:28:84.27:3048,84,0	1/1:2,18:29:65.97:2152,66,0	0/0:33,0:33:93.31:0,93,2325	0/0:39,0:39:99:0,117,3025	0/0:27,0:27:78.25:0,78,1898	0/0:23,0:23:63.22:0,63,1661	0/0:40,0:40:99:0,117,2873	0/0:42,0:42:99:0,126,3049	0/0:21,0:21:60.15:0,60,1409	0/0:23,0:23:63.20:0,63,1527	0/0:24,0:24:69.21:0,69,1691	0/0:40,0:40:99:0,108,2686	0/0:25,0:25:72.22:0,72,1790	0/0:27,0:27:78.24:0,78,1861	0/0:45,0:45:99:0,132,3300	1/1:2,11:16:39.13:1512,39,0	0/0:30,0:30:75.25:0,75,1926	0/0:25,0:23:75.24:0,75,1831	0/0:17,0:17:48.16:0,48,1265
chr10	74023802	.	A	ATCTGAC	7489.56	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-7.052;DP=643;FS=2.759;HRun=0;HaplotypeScore=131.2357;InbreedingCoeff=0.9931;MQ=77.94;MQ0=0;MQRankSum=-13.442;QD=74.15;ReadPosRankSum=0.644;VQSLOD=5.8023;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,11:20:30.10:1065,30,0	0/0:5,0:5:15.05:0,15,355	0/0:19,0:19:54.02:0,54,1177	0/0:25,0:25:69.05:0,69,1415	0/0:18,0:18:54.18:0,54,1204	0/0:22,0:22:63.17:0,63,1409	0/0:26,0:26:69.20:0,69,1581	0/0:30,0:30:78.24:0,78,1650	0/0:13,0:13:33.11:0,33,780	1/1:8,23:31:81.26:2745,81,0	1/1:0,18:19:45.15:1583,45,0	0/0:24,0:24:69.24:0,69,1590	0/0:21,0:21:63.22:0,63,1381	0/0:25,0:25:75.24:0,75,1686	0/0:22,0:22:63.20:0,63,1425	0/0:32,0:31:87.29:0,87,2012	0/0:33,0:33:99:0,99,2218	0/0:23,0:23:60.16:0,60,1368	0/0:20,0:20:54.16:0,54,1038	0/0:22,0:22:66.18:0,66,1422	0/0:36,0:36:99:0,99,2274	0/0:15,0:15:45.15:0,45,1041	0/0:16,0:16:42.14:0,42,953	0/0:42,0:42:99:0,126,2906	1/1:5,26:31:60.21:2097,60,0	0/0:24,0:24:72.22:0,72,1554	0/0:22,0:22:63.22:0,63,1426	0/0:7,0:7:18.06:0,18,403
chr10	74024339	.	GTA	G	1111.08	PASS	AB=1.000;AC=10;AF=0.185;AN=54;BaseQRankSum=6.659;DP=653;FS=1.721;HRun=0;HaplotypeScore=106.7464;InbreedingCoeff=0.5406;MQ=64.19;MQ0=11;MQRankSum=-1.600;QD=6.54;ReadPosRankSum=1.625;VQSLOD=3.2374;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,18:21:13.63:187,14,0	0/0:9,0:9:21.06:0,21,326	0/1:11,0:5:2.47:2,0,19	0/0:19,0:10:11.80:0,12,137	0/0:26,0:26:54.11:0,54,847	0/0:16,0:16:30.14:0,30,522	0/0:19,0:19:48.12:0,48,770	0/0:35,0:35:90.19:0,90,1327	0/0:20,0:20:46.64:0,47,681	1/1:23,3:25:65.92:757,66,0	0/0:1,13:13:0:0,0,0	1/1:30,0:30:23.12:189,23,0	0/1:20,0:20:31.12:31,0,36	0/0:26,0:26:71.56:0,72,1134	0/0:31,0:31:86.84:0,87,1127	0/0:26,0:25:63.07:0,63,833	0/0:32,0:30:81.11:0,81,1250	0/0:18,0:18:36.58:0,37,578	0/0:20,0:19:53.81:0,54,734	0/0:26,0:25:54.12:0,54,842	0/0:37,0:36:87.04:0,87,1311	0/1:30,0:29:4.22:4,0,42	0/0:20,0:20:11.97:0,12,99	0/1:30,0:30:53.36:91,0,53	./.	0/0:28,0:28:78.18:0,78,1177	0/0:20,0:20:55.61:0,56,775	0/0:22,0:22:66.18:0,66,1082
chr10	74024344	.	TAC	T	1374.70	PASS	AB=0.897;AC=16;AF=0.286;AN=56;BaseQRankSum=6.282;DP=647;FS=3.104;HRun=0;HaplotypeScore=105.2414;InbreedingCoeff=0.6550;MQ=60.52;MQ0=14;MQRankSum=2.976;QD=6.34;ReadPosRankSum=-0.784;VQSLOD=3.0395;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:24:9.51:60,0,10	0/0:8,0:8:18.06:0,18,269	1/1:9,0:3:0.89:2,1,0	0/0:17,0:8:6.02:0,6,77	0/0:23,0:23:45.15:0,45,683	0/1:17,0:17:22.10:22,0,417	0/0:19,0:19:35.17:0,35,607	0/0:32,0:32:80.79:0,81,1158	0/0:21,0:21:23.54:0,24,566	1/1:26,0:25:41.64:260,42,0	0/0:13,0:12:0:0,0,0	1/1:24,2:26:54.10:633,54,0	1/1:2,16:18:9.02:102,9,0	0/0:25,0:25:47.43:0,47,878	0/0:31,0:31:13.27:0,13,692	0/0:27,0:26:36.59:0,37,569	0/0:32,0:29:65.79:0,66,968	0/0:23,0:22:36.31:0,36,424	0/0:21,0:19:36.03:0,36,503	0/0:25,0:24:51.13:0,51,699	0/0:44,0:43:75.20:0,75,1082	1/1:6,26:31:3.01:38,3,0	0/1:5,12:17:0:0,0,0	1/1:27,2:29:36.08:423,36,0	0/1:16,0:16:0:0,0,0	0/0:26,0:26:60.66:0,61,881	0/0:20,0:20:27.65:0,28,598	0/0:23,0:23:59.92:0,60,813
chr10	74024356	.	CAT	C	708.07	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=8.606;DP=632;FS=26.812;HRun=0;HaplotypeScore=104.4865;InbreedingCoeff=0.3449;MQ=54.09;MQ0=18;MQRankSum=0.834;QD=2.30;ReadPosRankSum=-2.798;VQSLOD=-0.3189;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:29:31.49:49,0,31	0/0:9,0:9:17.84:0,18,181	1/1:7,0:1:3:29,3,0	0/0:13,0:4:5.99:0,6,49	0/0:26,0:26:20.88:0,21,418	0/1:19,0:19:79.31:79,0,277	0/1:19,0:19:4.17:4,0,398	0/0:31,0:31:65.01:0,65,641	0/1:23,0:23:12.76:13,0,418	0/1:21,0:20:6.26:6,0,118	0/0:12,0:11:0:0,0,0	1/1:24,4:27:50.86:316,51,0	1/1:20,1:21:9.38:72,9,0	0/0:22,0:22:21.99:0,22,558	0/1:26,0:25:41.46:41,0,534	0/0:23,0:22:38.47:0,38,363	0/1:31,0:28:4.18:4,0,612	0/0:26,0:25:9.70:0,10,170	0/0:14,0:12:30.60:0,31,298	0/0:25,0:24:35.95:0,36,500	0/0:44,0:42:23.17:0,23,708	1/1:31,0:30:10.63:92,11,0	0/0:14,0:14:0:0,0,0	1/1:30,1:31:29.31:148,29,0	1/1:17,0:17:3:25,3,0	0/0:24,0:24:27.46:0,27,519	0/0:18,0:18:2.45:0,2,431	0/0:23,0:23:51.41:0,51,466
chr10	74024358	.	T	TAC	145.73	PASS	AB=1.000;AC=13;AF=0.250;AN=52;BaseQRankSum=0.058;DP=631;FS=10.064;HRun=0;HaplotypeScore=111.1819;InbreedingCoeff=0.4700;MQ=53.01;MQ0=17;MQRankSum=-1.011;QD=0.71;ReadPosRankSum=-3.271;VQSLOD=0.4856;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:31:8.05:66,8,0	0/0:9,0:9:6:0,6,56	./.	./.	0/1:27,0:27:30.97:31,0,102	0/0:19,0:19:18.81:0,19,149	0/0:20,0:20:20.05:0,20,143	1/1:32,0:32:2.96:7,3,0	0/0:23,0:23:30.65:0,31,278	0/0:21,0:20:9.41:0,9,44	0/1:13,0:11:0:0,0,0	0/0:28,0:27:11.50:0,11,50	0/0:20,0:20:7.89:0,8,36	0/0:22,0:22:17.81:0,18,162	0/0:26,0:25:36.57:0,37,335	1/1:12,10:21:8.73:130,9,0	0/0:31,0:28:30.28:0,30,286	0/0:26,0:25:2.80:0,3,13	0/0:13,0:11:3.89:0,4,34	0/0:27,0:26:18:0,18,176	0/1:44,0:42:15.62:16,0,186	0/0:32,0:31:5:0,5,22	1/1:15,0:15:2.99:24,3,0	0/0:31,0:31:5.77:0,6,31	1/1:17,0:17:2.50:9,2,0	0/0:22,0:23:17.69:0,18,132	0/0:18,0:18:29.63:0,30,252	0/0:19,0:19:17.54:0,18,142
chr10	74024396	.	CACACACAG	C	1940.18	PASS	AB=0.892;AC=14;AF=0.250;AN=56;BaseQRankSum=6.196;DP=678;FS=6.660;HRun=0;HaplotypeScore=159.7138;InbreedingCoeff=0.6251;MQ=58.53;MQ0=17;MQRankSum=3.321;QD=9.70;ReadPosRankSum=-0.150;VQSLOD=2.2888;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:28:99:109,0,198	0/0:9,0:9:18.05:0,18,420	0/0:23,0:16:41.05:0,41,444	0/0:36,0:21:47.06:0,47,497	0/0:32,0:32:63.04:0,63,1092	0/0:23,0:23:54.09:0,54,1226	0/0:27,0:27:72.09:0,72,1174	0/0:21,0:21:53.36:0,53,473	0/0:23,0:23:54.08:0,54,1352	1/1:3,28:30:83.49:896,83,0	1/1:11,2:11:20.05:168,20,0	0/1:24,0:23:96.28:96,0,281	1/1:29,0:29:9.41:260,9,0	0/0:20,0:20:54.06:0,54,1144	0/0:27,0:26:63.13:0,63,1869	0/0:23,0:22:38.87:0,39,691	0/0:24,0:22:49.41:0,49,1669	0/1:6,19:24:23.60:98,0,24	0/0:16,0:16:44.99:0,45,645	0/0:22,0:21:48.11:0,48,1221	0/0:55,0:53:98.39:0,98,2045	0/1:25,0:24:1.55:178,0,2	1/1:9,0:9:5.60:49,6,0	0/0:30,0:30:15.03:0,15,235	1/1:12,0:12:27.42:266,27,0	0/0:27,0:26:74.95:0,75,1381	0/0:20,0:20:57.01:0,57,1319	0/0:20,0:20:53.90:0,54,777
chr10	74024400	.	CACAG	C	2388.90	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=8.787;DP=666;FS=6.711;HRun=0;HaplotypeScore=118.1420;InbreedingCoeff=0.8233;MQ=66.04;MQ0=15;MQRankSum=2.374;QD=11.32;ReadPosRankSum=1.079;VQSLOD=2.8534;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:29:18.84:220,0,19	0/0:7,0:7:12.01:0,12,178	0/0:26,0:19:49.93:0,50,505	0/0:42,0:27:51.80:0,52,562	0/0:29,0:29:56.96:0,57,635	0/0:24,0:24:47.86:0,48,621	0/0:27,0:27:47.23:0,47,721	0/0:20,0:20:51.05:0,51,440	0/0:23,0:23:57.06:0,57,910	1/1:29,0:28:83.49:710,83,0	1/1:12,0:11:26.67:217,27,0	1/1:18,2:19:17.25:338,17,0	1/1:25,1:26:56.21:470,56,0	0/0:21,0:21:56.92:0,57,733	0/0:28,0:27:67.26:0,67,1123	0/0:23,0:22:38.57:0,39,464	0/0:24,0:23:52.38:0,52,1012	1/1:22,0:21:5.17:60,5,0	0/0:16,0:16:16.74:0,17,385	0/0:24,0:23:51.09:0,51,825	0/0:50,0:48:92.28:0,92,1280	1/1:20,0:20:23.99:229,24,0	1/1:8,1:9:8.67:65,9,0	0/1:29,0:29:3.95:44,0,4	1/1:11,0:11:29.89:238,30,0	0/0:30,0:29:54.85:0,55,847	0/0:21,0:21:57.88:0,58,850	0/0:20,0:20:53.88:0,54,657
chr10	74024402	.	CAG	C	2433.86	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=9.594;DP=639;FS=2.416;HRun=0;HaplotypeScore=94.5500;InbreedingCoeff=0.9444;MQ=70.39;MQ0=14;MQRankSum=0.212;QD=12.55;ReadPosRankSum=1.518;VQSLOD=3.6164;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:28:29.56:259,30,0	0/0:5,0:5:9:0,9,106	0/0:29,0:22:58.77:0,59,567	0/0:45,0:30:54.31:0,54,585	0/0:29,0:29:40.73:0,41,466	0/0:20,0:20:44.89:0,45,424	0/0:25,0:25:54.60:0,55,550	0/0:20,0:20:41.84:0,42,359	0/0:25,0:25:59.81:0,60,745	1/1:28,0:28:83.45:663,83,0	1/1:12,0:11:26.80:217,27,0	1/1:14,3:16:38.42:320,38,0	1/1:20,3:23:59.76:503,60,0	0/0:19,0:19:46.99:0,47,534	0/0:26,0:25:60.86:0,61,742	0/0:26,0:25:44.85:0,45,420	0/0:24,0:23:42.38:0,42,645	1/1:22,0:21:5.90:47,6,0	0/0:16,0:16:39.43:0,39,365	0/0:22,0:21:47.73:0,48,556	0/0:45,0:43:86.23:0,86,934	1/1:15,2:17:27:260,27,0	1/1:8,0:8:6.46:51,6,0	1/1:2,22:24:6.02:88,6,0	1/1:11,0:11:29.89:238,30,0	0/0:28,0:27:37.13:0,37,591	0/0:21,0:21:49.78:0,50,576	0/0:20,0:20:45.47:0,45,513
chr10	74024959	.	C	CTTG	6323.28	PASS	AB=0.840;AC=9;AF=0.161;AN=56;BaseQRankSum=-9.502;DP=773;FS=24.637;HRun=0;HaplotypeScore=101.9685;InbreedingCoeff=0.8590;MQ=86.02;MQ0=0;MQRankSum=-3.934;QD=48.27;ReadPosRankSum=0.906;VQSLOD=4.3088;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,56:61:99:3339,154,0	0/0:4,0:4:12.04:0,12,194	0/0:15,0:15:39.13:0,39,637	0/0:37,0:37:99:0,105,1674	0/0:13,0:13:39.11:0,39,586	0/0:24,0:24:69.24:0,69,1122	0/0:35,0:35:99:0,99,1613	0/0:33,0:33:90.31:0,90,1469	0/0:22,0:22:66.21:0,66,1051	1/1:1,17:20:60.17:1245,60,0	1/1:2,9:11:24.08:477,24,0	0/0:32,0:32:93.30:0,93,1494	0/0:32,0:32:93.30:0,93,1491	0/0:36,0:36:99:0,105,1681	0/0:40,0:40:99:0,117,1910	0/0:25,0:25:63.21:0,63,1029	0/0:39,0:39:99:0,111,1780	0/0:34,0:34:99:0,99,1617	0/0:17,0:17:51.17:0,51,833	0/0:21,0:21:45.14:0,45,704	0/0:64,0:64:99:0,169,2738	0/0:25,0:25:69.24:0,69,1126	0/0:20,0:20:57.19:0,57,930	0/0:43,0:43:99:0,126,2025	1/1:0,18:18:48.16:1072,48,0	0/1:17,4:21:99:191,0,702	0/0:24,0:24:72.21:0,72,1126	0/0:7,0:7:21.07:0,21,343
chr10	74026047	.	GCTCCTCTTCCTC	G	995.18	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.542;DP=556;FS=2.369;HRun=0;HaplotypeScore=184.0909;InbreedingCoeff=0.9069;MQ=67.43;MQ0=2;MQRankSum=-5.070;QD=28.43;ReadPosRankSum=-0.823;VQSLOD=3.2427;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,28:35:33.11:1090,33,0	0/0:7,0:7:18.05:0,18,681	0/0:29,0:21:33.10:0,33,1011	0/0:23,0:17:18.85:0,19,1033	0/0:14,0:14:39.12:0,39,1985	0/0:24,0:24:60.20:0,60,3224	0/0:17,0:17:30.09:0,30,1467	0/0:43,0:43:66.20:0,66,2564	0/0:21,0:21:48.07:0,48,2425	0/0:8,0:8:15.05:0,15,697	0/0:6,0:6:9.02:0,9,384	0/0:22,0:22:36.12:0,36,1967	0/0:17,0:17:39.12:0,39,1743	0/0:22,0:22:51.18:0,51,2804	0/0:19,0:19:33.11:0,33,1924	0/0:20,0:20:48.15:0,48,2627	0/0:32,0:31:69.24:0,69,3712	0/0:32,0:32:61.28:0,61,3996	0/0:21,0:21:42.14:0,42,2112	0/0:9,0:9:21.07:0,21,1245	0/0:37,0:37:81.27:0,81,4399	0/0:13,0:13:30.10:0,30,1555	0/0:7,0:7:21.07:0,21,1120	0/0:22,0:22:57.18:0,57,3028	0/0:12,0:12:30.10:0,30,1779	0/0:20,0:20:42.14:0,42,2481	0/0:14,0:14:27.07:0,27,1412	0/0:10,0:10:24.07:0,24,1004
chr10	74027754	.	T	TG	3711.52	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.170;DP=620;FS=7.173;HRun=1;HaplotypeScore=65.3219;InbreedingCoeff=0.9834;MQ=88.18;MQ0=0;MQRankSum=-2.439;QD=42.18;ReadPosRankSum=-0.442;VQSLOD=3.6641;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,39:40:99:1708,114,0	0/0:12,0:12:36.12:0,36,467	0/0:20,0:20:57.15:0,57,711	0/0:24,0:24:66.69:0,67,856	0/0:18,0:18:51.17:0,51,661	0/0:11,0:11:30.10:0,30,389	0/0:36,0:36:99:0,102,1295	0/0:26,0:26:78.25:0,78,1013	0/0:22,0:22:60.18:0,60,764	1/1:2,18:21:54.18:794,54,0	1/1:0,12:12:36.12:535,36,0	0/0:29,0:29:87.25:0,87,1098	0/0:23,0:23:66.21:0,66,856	0/0:23,0:23:63.20:0,63,817	0/0:25,0:25:75.23:0,75,958	0/0:32,0:32:93.30:0,93,1207	0/0:37,0:37:99:0,111,1424	0/0:27,0:27:81.26:0,81,1052	0/0:21,0:21:60.19:0,60,778	0/0:9,0:9:27.09:0,27,350	0/0:34,0:34:99:0,102,1324	0/0:12,0:12:36.12:0,36,467	0/0:11,0:11:33.08:0,33,400	0/0:30,0:30:87.27:0,87,1116	1/1:0,15:15:45.15:675,45,0	0/0:23,0:23:57.18:0,57,729	0/0:24,0:24:72.23:0,72,935	0/0:3,0:3:9.03:0,9,117
chr10	74029440	.	CA	C	668.36	PASS	AB=0.858;AC=17;AF=0.304;AN=56;BaseQRankSum=1.726;DP=547;FS=0.458;HRun=14;HaplotypeScore=73.2595;InbreedingCoeff=0.1115;MQ=70.70;MQ0=1;MQRankSum=-0.655;QD=2.55;ReadPosRankSum=3.819;VQSLOD=-0.7407;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:28:60.09:0,60,349	0/0:8,0:8:21.02:0,21,195	0/0:26,0:12:10.50:0,11,130	0/0:15,0:11:17.58:0,18,123	0/1:22,4:28:38.03:38,0,245	0/1:17,2:20:3.02:3,0,274	0/1:15,1:16:17.31:17,0,257	0/0:21,1:27:14.93:0,15,239	0/1:11,2:13:5.06:5,0,231	0/0:13,0:19:38.06:0,38,229	0/0:3,0:4:8.66:0,9,49	1/1:7,11:19:37.66:250,38,0	0/1:18,1:19:41.04:46,0,41	0/0:18,0:17:1:0,1,262	0/0:19,0:19:7.72:0,8,192	0/0:19,1:21:30.28:0,30,404	0/0:38,0:39:71.17:0,71,791	0/1:15,0:29:26.35:36,0,26	0/1:22,1:26:14.85:15,0,293	0/1:19,1:22:1.13:1,0,194	0/0:11,0:11:24.02:0,24,219	0/1:5,11:16:6.73:202,0,7	1/1:7,8:15:17.67:123,18,0	1/1:1,4:5:11.87:82,12,0	0/0:4,0:28:22.73:0,23,114	0/0:20,1:21:25.19:0,25,349	0/1:21,2:23:5.51:6,0,324	0/1:8,1:10:8.73:9,0,58
chr10	74030122	.	C	CT	2866.04	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-10.978;DP=688;FS=0.000;HRun=7;HaplotypeScore=62.0967;InbreedingCoeff=0.9502;MQ=78.85;MQ0=0;MQRankSum=-4.639;QD=27.56;ReadPosRankSum=2.626;VQSLOD=4.3397;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,27:34:78.23:934,78,0	0/0:14,0:14:33.04:0,33,312	0/0:21,0:20:50.82:0,51,475	0/0:18,0:18:39.01:0,39,362	0/0:33,0:33:84.12:0,84,811	0/0:34,0:34:95.19:0,95,904	0/0:25,0:25:66.08:0,66,626	0/0:44,0:44:99:0,102,985	0/0:11,0:11:33.05:0,33,319	1/1:1,20:21:60.18:725,60,0	1/1:6,19:25:54.17:652,54,0	0/0:20,0:20:54.08:0,54,521	0/0:23,0:23:57.09:0,57,550	0/0:23,0:23:54.08:0,54,521	0/0:17,0:17:51.07:0,51,486	0/0:23,0:23:60.09:0,60,579	0/0:34,0:34:93.14:0,93,898	0/0:24,0:24:65.14:0,65,614	0/0:19,0:19:48.03:0,48,448	0/0:26,0:26:63.09:0,63,608	0/0:18,0:18:45.06:0,45,435	0/0:25,0:25:72.11:0,72,695	0/0:26,0:26:69.10:0,69,666	0/0:31,0:31:87.14:0,87,840	1/1:0,24:24:60.18:715,60,0	0/0:23,2:25:2.64:0,3,594	0/0:21,0:21:60.07:0,60,572	0/0:29,0:29:81.13:0,81,782
chr10	74031788	.	ATAG	A	196.23	PASS	AB=0.978;AC=13;AF=0.271;AN=48;BaseQRankSum=2.903;DP=751;FS=0.000;HRun=0;HaplotypeScore=126.8108;InbreedingCoeff=0.1314;MQ=63.85;MQ0=14;MQRankSum=0.268;QD=0.76;ReadPosRankSum=1.314;VQSLOD=2.3289;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:27:14.97:121,15,0	0/0:11,0:11:18.04:0,18,294	./.	./.	0/0:18,0:18:17.99:0,18,206	0/0:29,0:29:3.24:0,3,193	0/0:24,0:24:23.98:0,24,241	./.	0/1:27,0:27:29.86:30,0,364	1/1:27,0:27:3:28,3,0	./.	0/0:29,0:29:17.98:0,18,251	0/0:28,0:29:19.83:0,20,189	0/0:36,0:36:35.67:0,36,545	0/1:37,3:39:19.95:20,0,710	0/0:33,0:33:10.85:0,11,422	0/1:26,0:25:38.37:38,0,208	0/1:20,0:19:19.91:20,0,23	0/1:15,1:16:29.52:30,0,100	0/0:27,0:26:11.25:0,11,177	0/0:41,0:40:50.40:0,50,639	0/0:31,0:33:11.96:0,12,113	0/0:24,0:22:3.44:0,3,26	0/0:34,0:34:18.01:0,18,217	1/1:19,1:18:2.99:25,3,0	0/1:34,1:34:0.80:1,0,359	0/0:33,0:33:31.78:0,32,791	0/1:15,0:15:26.67:27,0,202
chr10	74031843	.	TAGCAGCAGCAGCACC	T	785.80	PASS	AB=0.734;AC=6;AF=0.111;AN=54;BaseQRankSum=5.920;DP=634;FS=28.316;HRun=0;HaplotypeScore=227.8276;InbreedingCoeff=0.2721;MQ=49.82;MQ0=21;MQRankSum=-3.605;QD=7.02;ReadPosRankSum=0.894;VQSLOD=1.0125;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:22:0.85:0,1,3	0/0:8,0:8:21.06:0,21,551	0/0:26,0:13:36.33:0,36,709	0/0:25,0:15:37.30:0,37,1120	0/0:14,0:12:15.05:0,15,432	0/1:15,0:19:12.46:12,0,1171	0/0:30,0:30:69.63:0,70,2722	0/0:36,0:34:62.03:0,62,2077	0/0:28,0:28:75.22:0,75,3447	0/0:13,0:12:18.54:0,19,153	./.	0/1:10,17:27:68.17:104,0,68	0/1:9,20:29:18.41:611,0,18	0/0:29,0:29:81.26:0,81,3403	0/0:37,0:37:65.84:0,66,3815	0/0:30,0:30:41.34:0,41,2172	0/0:14,0:14:19.41:0,19,1208	0/0:19,0:18:42.55:0,43,1340	0/0:9,0:8:6.14:0,6,296	0/0:11,0:10:18.04:0,18,470	0/0:45,0:44:94.66:0,95,3512	0/1:17,2:17:4.64:105,0,5	1/1:14,4:16:6.27:73,6,0	0/0:30,0:29:10.28:0,10,75	0/0:16,0:14:0.85:0,1,3	0/0:25,0:24:13.25:0,13,1140	0/0:31,0:31:81.27:0,81,3266	0/0:13,0:12:27.09:0,27,1255
chr10	74031845	.	GCAGCAGCAGCAC	G	618.55	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=5.241;DP=630;FS=26.366;HRun=0;HaplotypeScore=200.4250;InbreedingCoeff=0.5777;MQ=49.86;MQ0=18;MQRankSum=-5.075;QD=5.78;ReadPosRankSum=-0.035;VQSLOD=1.2232;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:0.38:0,0,2	0/0:8,0:8:9.03:0,9,223	0/0:27,0:14:21.45:0,21,577	0/0:25,0:15:30.99:0,31,789	0/0:15,0:13:9.03:0,9,315	0/0:18,0:18:24.07:0,24,861	0/0:28,0:28:54.66:0,55,2233	0/0:34,0:34:36.12:0,36,1425	0/0:27,0:27:66.21:0,66,2653	0/0:14,0:13:6.03:0,6,61	./.	1/1:27,0:27:2.56:88,3,0	1/1:27,1:28:18.06:530,18,0	0/0:29,0:29:57.20:0,57,2478	0/0:37,0:37:69.24:0,69,2950	0/0:27,0:27:45.13:0,45,1748	0/0:14,0:14:24.04:0,24,872	0/0:20,0:19:42.14:0,42,1053	0/0:9,0:8:3.01:0,3,134	0/0:10,0:9:6.02:0,6,248	0/0:48,0:46:69.24:0,69,2729	1/1:18,0:16:2.88:77,3,0	1/1:17,0:15:3.48:44,3,0	0/0:18,12:29:0.51:0,1,1	0/1:17,0:15:11.21:11,0,66	0/0:25,0:23:24.08:0,24,961	0/0:32,0:32:57.20:0,57,2335	0/0:14,0:13:24.08:0,24,1044
chr10	74031854	.	GCAC	G	296.99	PASS	AB=0.982;AC=12;AF=0.222;AN=54;BaseQRankSum=9.350;DP=607;FS=5.274;HRun=0;HaplotypeScore=113.5345;InbreedingCoeff=0.5988;MQ=53.37;MQ0=12;MQRankSum=-4.759;QD=2.14;ReadPosRankSum=-4.307;VQSLOD=-0.2732;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:1.22:25,1,0	0/0:10,0:10:27.02:0,27,355	0/0:35,0:17:38.19:0,38,400	0/0:31,0:21:40:0,40,632	0/0:12,0:11:26.99:0,27,309	0/0:16,0:16:14.48:0,14,519	0/0:30,0:30:81.18:0,81,1226	0/0:31,0:31:91.68:0,92,1245	0/0:25,0:25:75.05:0,75,1225	0/1:15,0:14:12.84:58,0,13	./.	1/1:23,3:26:8.83:50,9,0	0/1:26,1:27:7.20:220,0,7	0/0:27,0:27:78.14:0,78,1299	0/0:36,1:37:98.74:0,99,1512	0/0:25,0:25:42.42:0,42,951	0/0:12,0:12:32.51:0,33,459	0/0:17,0:17:18.06:0,18,117	0/0:11,0:8:14.81:0,15,168	0/0:10,0:10:24.03:0,24,273	0/0:52,0:50:99:0,125,1844	1/1:11,1:11:4.65:35,5,0	1/1:14,0:13:1.96:12,2,0	0/0:21,0:20:5.37:0,5,69	1/1:17,0:17:4.99:42,5,0	0/0:19,0:17:37.15:0,37,549	0/0:30,0:30:90.19:0,90,1391	0/0:13,0:12:36.07:0,36,565
chr10	74031866	.	GCAC	G	503.77	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=8.148;DP=640;FS=25.552;HRun=0;HaplotypeScore=118.3992;InbreedingCoeff=0.8089;MQ=62.34;MQ0=3;MQRankSum=-4.986;QD=5.30;ReadPosRankSum=-2.372;VQSLOD=0.8147;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,24:34:23.20:299,23,0	0/0:8,0:8:24:0,24,318	0/0:32,0:23:56.64:0,57,892	0/0:39,0:35:91.36:0,91,1316	0/0:15,0:15:42.07:0,42,716	0/0:17,0:17:48.09:0,48,797	0/0:34,0:34:99:0,99,1909	0/0:32,0:32:84.15:0,84,1492	0/0:27,0:27:78.24:0,78,1681	1/1:12,1:12:0.78:100,1,0	1/1:3,0:3:5.99:50,6,0	0/0:25,0:25:13.48:0,13,100	0/1:27,0:27:0.01:0,0,141	0/0:26,0:26:77.57:0,78,1520	0/0:31,0:31:90.27:0,90,1864	0/0:27,0:27:74.90:0,75,1424	0/0:12,0:12:36.08:0,36,688	0/0:19,0:19:50.83:0,51,617	0/0:13,0:9:21.06:0,21,422	0/0:10,0:10:27.06:0,27,471	0/0:53,0:52:99:0,150,2628	0/0:12,0:12:25.76:0,26,229	0/0:21,0:21:32.49:0,32,287	0/0:27,0:26:10.51:0,11,82	1/1:15,3:18:25.02:196,25,0	0/0:25,0:25:69.17:0,69,1294	0/0:28,0:28:78.20:0,78,1530	0/0:12,0:11:33.09:0,33,711
chr10	74031878	.	GCAC	G	733.09	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.401;DP=638;FS=18.447;HRun=0;HaplotypeScore=111.0722;InbreedingCoeff=0.9761;MQ=70.29;MQ0=2;MQRankSum=-3.125;QD=9.91;ReadPosRankSum=-2.885;VQSLOD=1.4213;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:26.14:323,26,0	0/0:5,0:5:15.05:0,15,342	0/0:29,0:23:61.95:0,62,1201	0/0:41,0:41:99:0,101,1967	0/0:18,0:18:50.11:0,50,1009	0/0:21,0:21:57.05:0,57,974	0/0:32,0:32:96.25:0,96,2021	0/0:34,0:34:96.22:0,96,1917	0/0:25,0:25:75.23:0,75,1636	1/1:15,1:16:13.13:127,13,0	1/1:5,0:5:11.48:99,11,0	0/0:23,0:23:21.48:0,21,349	0/0:26,0:26:23.03:0,23,448	0/0:25,0:25:75.18:0,75,1504	0/0:33,0:33:93.22:0,93,1830	0/0:27,0:27:78.18:0,78,1529	0/0:11,0:11:33.06:0,33,708	0/0:21,0:21:56.84:0,57,1195	0/0:14,0:10:27.08:0,27,522	0/0:12,0:12:36.07:0,36,656	0/0:44,0:43:99:0,129,2833	0/0:13,0:13:35.80:0,36,637	0/0:20,0:20:38.82:0,39,707	0/0:25,0:25:27.47:0,27,415	1/1:18,3:21:42.42:339,42,0	0/0:24,0:24:69.20:0,69,1419	0/0:29,0:29:81.19:0,81,1548	0/0:12,0:11:33.07:0,33,690
chr10	74031992	.	GGCCAGTGCTCTACAGAGT	G	3543.84	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=8.218;DP=561;FS=14.173;HRun=0;HaplotypeScore=271.7635;InbreedingCoeff=0.8621;MQ=73.39;MQ0=0;MQRankSum=-4.407;QD=90.87;ReadPosRankSum=-0.213;VQSLOD=2.0642;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,7:9:24.08:1111,24,0	0/0:7,0:7:21.07:0,21,1297	0/0:11,0:11:33.03:0,33,1344	0/1:9,0:9:5.51:6,0,704	0/0:23,0:23:66.16:0,66,4966	0/0:15,0:15:45.15:0,45,3470	0/0:30,0:30:90.31:0,90,6810	0/0:24,0:24:69.24:0,69,5108	0/0:26,0:26:75.26:0,75,6379	1/1:0,12:12:33.11:1292,33,0	1/1:1,1:2:6.01:177,6,0	0/0:34,0:34:99:0,99,7755	0/0:26,0:26:75.26:0,75,6258	0/0:23,0:23:69.24:0,69,5454	0/0:38,0:38:99:0,114,9060	0/0:29,0:28:84.29:0,84,7006	0/0:18,0:18:54.19:0,54,4467	0/0:17,0:17:51.18:0,51,3745	0/0:14,0:14:42.11:0,42,3023	0/0:12,0:12:36.12:0,36,3018	0/0:34,0:34:99:0,102,7798	0/0:21,0:21:63.20:0,63,4916	0/0:17,0:17:51.18:0,51,3587	0/0:22,0:22:60.21:0,60,5196	1/1:1,6:7:21.07:958,21,0	0/0:36,0:36:99:0,105,7995	0/0:31,0:31:93.32:0,93,7463	0/0:14,0:14:42.14:0,42,3750
chr10	74032013	.	GTATCATAA	G	1140.27	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.770;DP=540;FS=5.644;HRun=0;HaplotypeScore=155.4366;InbreedingCoeff=0.9424;MQ=86.22;MQ0=0;MQRankSum=-7.570;QD=47.51;ReadPosRankSum=3.510;VQSLOD=2.8703;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:21.07:429,21,0	0/0:6,0:6:18.06:0,18,711	0/0:19,0:19:57.20:0,57,2338	0/0:17,0:18:50.86:0,51,1979	0/0:20,0:20:60.21:0,60,2587	0/0:12,0:12:36.12:0,36,1583	0/0:28,0:28:84.29:0,84,3634	0/0:28,0:28:84.27:0,84,3540	0/0:26,0:26:78.25:0,78,3293	1/1:2,8:10:21.07:445,21,0	1/1:0,1:1:3.01:61,3,0	0/0:33,0:33:96.33:0,96,4327	0/0:25,0:25:63.17:0,63,2386	0/0:22,0:22:66.21:0,66,2840	0/0:35,0:35:99:0,105,4478	0/0:31,0:30:90.28:0,90,3736	0/0:18,0:18:54.19:0,54,2302	0/0:15,0:15:45.15:0,45,1984	0/0:15,0:15:45.11:0,45,1787	0/0:16,0:16:48.15:0,48,1970	0/0:25,0:25:72.21:0,72,3037	0/0:20,0:20:60.20:0,60,2482	0/0:13,0:13:39.12:0,39,1645	0/0:22,0:22:66.23:0,66,2877	1/1:0,6:6:18.06:355,18,0	0/0:27,0:27:81.28:0,81,3587	0/0:30,0:30:90.29:0,90,3793	0/0:12,0:12:36.12:0,36,1617
chr10	74032023	.	GTT	G	389.65	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.247;DP=556;FS=0.730;HRun=3;HaplotypeScore=91.2572;InbreedingCoeff=0.9107;MQ=88.11;MQ0=0;MQRankSum=-8.194;QD=8.12;ReadPosRankSum=1.926;VQSLOD=0.3501;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,7:17:5.92:132,6,0	0/0:5,0:5:15.05:0,15,290	0/0:20,0:20:57.16:0,57,1030	0/0:22,0:22:63.17:0,63,1081	0/0:17,0:17:51.17:0,51,985	0/0:14,0:14:42.14:0,42,811	0/0:29,0:29:84.29:0,84,1623	0/0:38,0:38:99:0,111,2024	0/0:24,0:24:72.24:0,72,1351	1/1:8,8:16:35.91:255,36,0	1/1:3,1:4:2.98:22,3,0	0/0:32,0:32:90.30:0,90,1706	0/0:18,0:18:45.15:0,45,860	0/0:20,0:20:57.20:0,57,1093	0/0:35,0:35:99:0,102,1909	0/0:29,0:28:78.23:0,78,1382	0/0:17,0:17:51.16:0,51,941	0/0:20,0:20:60.13:0,60,1083	0/0:17,0:17:48.14:0,48,864	0/0:13,0:13:36.12:0,36,696	0/0:25,0:25:72.25:0,72,1391	0/0:19,0:19:57.18:0,57,1041	0/0:14,0:14:42.14:0,42,807	0/0:23,0:23:69.16:0,69,1218	1/1:5,6:11:20.12:124,20,0	0/0:24,0:24:72.23:0,72,1327	0/0:23,0:23:69.24:0,69,1323	0/0:10,0:10:30.10:0,30,579
chr10	74034158	.	TG	T	3472.26	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=15.878;DP=713;FS=6.728;HRun=6;HaplotypeScore=78.4203;InbreedingCoeff=0.9963;MQ=83.69;MQ0=0;MQRankSum=-0.586;QD=28.94;ReadPosRankSum=1.374;VQSLOD=4.3375;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,49:52:99:1579,147,0	0/0:7,0:7:18.06:0,18,237	0/0:26,0:26:39.27:0,39,708	0/0:20,0:20:49.70:0,50,611	0/0:19,0:19:54.15:0,54,680	0/0:26,0:26:66.21:0,66,868	0/0:15,0:15:45.15:0,45,592	0/0:33,0:33:90.28:0,90,1160	0/0:22,0:22:57.17:0,57,735	1/1:0,30:30:90.22:958,90,0	1/1:3,9:12:27.07:290,27,0	0/0:29,0:29:81.26:0,81,1065	0/0:39,0:39:99:0,105,1381	0/0:28,0:28:81.26:0,81,1065	0/0:24,0:24:72.22:0,72,932	0/0:26,0:26:75.23:0,75,972	0/0:38,0:38:99:0,111,1441	0/0:44,0:44:99:0,132,1736	0/0:18,0:18:45.14:0,45,580	0/0:19,0:19:54.18:0,54,710	0/0:40,0:40:99:0,111,1428	0/0:19,0:19:51.17:0,51,669	0/0:24,0:24:72.23:0,72,942	0/0:19,0:19:51.09:0,51,621	1/1:5,21:26:60.14:645,60,0	0/0:25,1:26:40.56:0,41,841	0/0:25,0:24:72.23:0,72,947	0/0:7,0:7:21.07:0,21,268
chr10	74034812	.	AG	A	3973.42	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=8.807;DP=508;FS=5.728;HRun=8;HaplotypeScore=63.7720;InbreedingCoeff=0.9401;MQ=84.00;MQ0=0;MQRankSum=-2.841;QD=19.10;ReadPosRankSum=3.722;VQSLOD=3.6399;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,22:29:60.09:578,60,0	0/0:9,0:9:21.06:0,21,254	0/0:28,0:27:49.30:0,49,613	0/1:23,0:18:0.93:1,0,252	0/0:16,0:16:42.08:0,42,468	0/0:15,0:15:42.12:0,42,496	0/0:22,0:22:54.15:0,54,635	0/0:26,0:26:51.13:0,51,585	0/0:10,0:10:30.08:0,30,351	1/1:4,8:12:24.03:232,24,0	1/1:4,12:16:30.04:289,30,0	1/1:3,15:18:45.07:434,45,0	1/1:2,16:18:8.83:369,9,0	0/0:15,0:15:39.95:0,40,446	0/0:14,0:14:39.12:0,39,471	0/0:31,0:31:81.24:0,81,962	0/0:22,0:22:57.15:0,57,658	1/1:0,15:15:39.06:377,39,0	0/0:19,0:19:42.12:0,42,498	0/0:8,0:8:15.05:0,15,181	0/0:17,0:17:25.25:0,25,386	1/1:2,6:8:15.02:144,15,0	1/1:10,11:21:45.02:422,45,0	1/1:2,20:22:54.09:521,54,0	1/1:4,22:26:63.10:607,63,0	0/0:19,0:19:39.11:0,39,459	0/0:22,0:22:54.05:0,54,597	0/0:7,0:7:15.03:0,15,170
chr10	74035650	.	ACAACGACATGTGC	A	8637.54	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.697;DP=680;FS=13.068;HRun=0;HaplotypeScore=246.3873;InbreedingCoeff=0.9964;MQ=74.20;MQ0=0;MQRankSum=-12.018;QD=83.05;ReadPosRankSum=1.227;VQSLOD=3.0247;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,27:35:72.12:2553,72,0	0/0:7,0:7:18.06:0,18,1058	0/0:15,0:15:29.33:0,29,685	0/0:14,0:14:41.35:0,41,753	0/0:22,0:22:66.20:0,66,3899	0/0:27,0:27:81.28:0,81,5215	0/0:27,0:27:81.26:0,81,4989	0/0:36,0:36:99:0,99,3748	0/0:28,0:27:84.29:0,84,5143	1/1:1,30:31:90.29:3262,90,0	1/1:3,10:13:33.11:1288,33,0	0/0:29,0:29:87.28:0,87,5476	0/0:35,0:35:99:0,105,6066	0/0:31,0:31:90.31:0,90,5588	0/0:26,0:26:75.26:0,75,4772	0/0:25,0:25:72.25:0,72,4384	0/0:32,0:32:96.33:0,96,6102	0/0:19,0:19:48.14:0,48,2726	0/0:20,0:20:51.17:0,51,2762	0/0:17,0:17:48.14:0,48,2683	0/0:41,0:41:99:0,117,7330	0/0:19,0:19:54.19:0,54,3432	0/0:20,0:20:60.17:0,60,3473	0/0:27,0:27:78.27:0,78,4957	1/1:5,20:25:39.13:1535,39,0	0/0:30,0:30:87.30:0,87,5365	0/0:22,0:22:66.23:0,66,4069	0/0:7,0:7:21.07:0,21,896
chr10	74036089	.	TG	T	4492.27	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.070;DP=872;FS=48.216;HRun=1;HaplotypeScore=93.8158;InbreedingCoeff=1.0000;MQ=84.44;MQ0=0;MQRankSum=-1.860;QD=32.79;ReadPosRankSum=-1.162;VQSLOD=1.1923;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,49:49:99:1492,108,0	0/0:14,0:14:42.14:0,42,667	0/0:26,0:26:74.92:0,75,1144	0/0:27,0:27:57.15:0,57,859	0/0:32,0:32:93.32:0,93,1487	0/0:33,0:33:99:0,99,1583	0/0:28,0:28:84.29:0,84,1337	0/0:27,0:27:81.27:0,81,1276	0/0:35,0:35:99:0,105,1674	1/1:0,36:36:99:1363,105,0	1/1:0,23:23:46.09:631,46,0	0/0:42,0:42:99:0,126,2015	0/0:32,0:32:93.32:0,93,1486	0/0:35,0:35:99:0,99,1579	0/0:25,0:25:75.26:0,75,1199	0/0:33,0:33:99:0,99,1581	0/0:34,0:34:99:0,99,1554	0/0:19,0:19:57.19:0,57,911	0/0:37,0:37:99:0,108,1676	0/0:24,0:24:69.24:0,69,1101	0/0:59,0:59:99:0,174,2667	0/0:42,0:42:99:0,123,1967	0/0:23,0:23:63.21:0,63,1005	0/0:30,0:30:90.31:0,90,1433	1/1:0,29:29:72.24:1006,72,0	0/0:31,0:31:93.32:0,93,1487	0/0:35,0:35:99:0,105,1620	0/0:12,0:12:36.12:0,36,576
chr10	74036233	.	TG	T	4133.52	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.213;DP=663;FS=0.821;HRun=1;HaplotypeScore=63.7810;InbreedingCoeff=0.9990;MQ=83.00;MQ0=0;MQRankSum=-3.363;QD=36.58;ReadPosRankSum=3.358;VQSLOD=3.9775;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1726	0/0:12,0:12:36.12:0,36,575	0/0:27,0:27:78.22:0,78,1171	0/0:20,0:21:44.76:0,45,778	0/0:22,0:22:66.21:0,66,1031	0/0:23,0:23:69.24:0,69,1101	0/0:20,0:20:60.19:0,60,936	0/0:34,0:34:99:0,99,1541	0/0:29,0:29:87.27:0,87,1339	0/0:27,0:27:81.26:0,81,1252	0/0:12,0:12:36.09:0,36,529	1/1:0,29:29:78.26:1089,78,0	1/1:0,26:26:63.21:881,63,0	0/0:26,0:26:75.24:0,75,1174	0/0:28,0:28:84.29:0,84,1343	0/0:25,0:25:75.24:0,75,1172	0/0:28,0:28:84.24:0,84,1292	0/0:21,0:21:60.20:0,60,952	0/0:34,0:34:99:0,102,1610	0/0:20,0:20:60.20:0,60,959	0/0:24,0:24:72.22:0,72,1120	1/1:0,16:16:48.16:654,48,0	1/1:0,20:20:48.16:671,48,0	1/1:0,22:22:60.20:839,60,0	0/0:19,0:19:57.19:0,57,911	0/0:24,0:24:72.25:0,72,1148	0/0:31,0:31:93.32:0,93,1484	0/0:7,0:7:21.07:0,21,336
chr10	74039605	.	CTGCCAAGACTGA	C	8446.62	PASS	AC=18;AF=0.333;AN=54;BaseQRankSum=12.632;DP=413;FS=9.341;HRun=0;HaplotypeScore=125.1055;InbreedingCoeff=0.9180;MQ=45.92;MQ0=31;MQRankSum=-11.101;QD=85.32;ReadPosRankSum=2.424;VQSLOD=4.6098;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:11:24.08:947,24,0	0/0:6,0:5:15.05:0,15,953	./.	0/0:7,0:1:3.01:0,3,159	0/0:7,0:7:12:0,12,763	0/0:11,0:10:24.08:0,24,1526	0/0:19,0:13:33.10:0,33,1857	0/0:25,0:4:9.03:0,9,568	0/0:16,0:15:30.10:0,30,1806	1/1:0,7:7:21.07:754,21,0	1/1:1,4:4:12.04:470,12,0	1/1:2,16:16:42.14:1658,42,0	1/1:1,12:11:33.11:1301,33,0	0/0:12,0:11:26.93:0,27,1564	0/0:21,0:20:42.60:0,43,2258	0/0:13,0:13:33.11:0,33,1952	0/0:33,0:32:84.29:0,84,5245	0/0:24,0:18:54.19:0,54,3256	0/0:19,0:9:27.05:0,27,1439	0/0:11,0:11:33.11:0,33,1690	0/0:44,0:41:99:0,114,6543	1/1:0,12:12:30.10:1184,30,0	1/1:1,9:9:21.07:830,21,0	1/1:1,3:2:3.01:117,3,0	1/1:0,11:11:30.10:1185,30,0	0/0:19,0:18:54.19:0,54,3238	0/0:18,0:18:54.19:0,54,3431	0/0:5,0:5:15.05:0,15,944
chr10	74039774	.	T	TA	3152.97	PASS	AB=0.571;AC=17;AF=0.304;AN=56;BaseQRankSum=-8.166;DP=497;FS=0.913;HRun=11;HaplotypeScore=50.8864;InbreedingCoeff=0.7928;MQ=59.56;MQ0=3;MQRankSum=1.092;QD=18.99;ReadPosRankSum=2.552;VQSLOD=4.5990;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,23:28:54.11:548,54,0	0/0:9,0:9:20.90:0,21,162	0/0:6,0:4:5.94:0,6,45	0/0:4,0:2:2.99:0,3,23	0/0:31,1:32:49.27:0,49,550	0/0:17,0:17:38.71:0,39,299	0/0:16,0:16:35.85:0,36,279	0/0:35,0:36:91.63:0,92,695	0/0:13,0:13:20.87:0,21,162	1/1:6,17:23:7.60:426,8,0	0/1:3,9:12:19.40:186,0,19	1/1:1,18:19:51.10:518,51,0	1/1:1,6:7:15.03:152,15,0	0/0:13,0:13:32.84:0,33,253	0/0:15,0:15:29.87:0,30,230	0/0:12,0:13:34.88:0,35,259	0/0:28,0:30:69.77:0,70,518	0/0:23,0:24:64.79:0,65,493	0/0:11,0:7:3.86:0,4,102	0/0:18,0:19:49.84:0,50,376	0/0:14,0:14:35.82:0,36,275	1/1:2,8:10:0.76:178,1,0	1/1:4,12:16:27.05:274,27,0	1/1:2,22:24:60.12:609,60,0	1/1:7,20:26:45.09:457,45,0	0/0:18,0:18:38.84:0,39,302	0/0:23,0:23:46.82:0,47,351	0/0:16,0:17:46.85:0,47,354
chr10	74040933	.	A	AT	3029.70	PASS	AB=0.889;AC=19;AF=0.339;AN=56;BaseQRankSum=-7.183;DP=590;FS=2.373;HRun=12;HaplotypeScore=69.6977;InbreedingCoeff=0.8873;MQ=71.42;MQ0=0;MQRankSum=0.812;QD=14.78;ReadPosRankSum=-0.250;VQSLOD=4.3321;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,32:40:80.80:758,81,0	0/0:9,0:9:17.88:0,18,131	0/1:14,1:10:1.51:2,0,18	0/0:9,0:9:8.78:0,9,63	0/0:29,0:31:79.54:0,80,573	0/0:21,0:21:53.68:0,54,394	0/0:25,0:26:49.64:0,50,347	0/0:32,1:36:49.35:0,49,502	0/0:19,0:21:25.25:0,25,293	1/1:5,10:16:32.84:296,33,0	1/1:4,17:21:2.46:329,2,0	1/1:6,17:24:45.05:429,45,0	1/1:3,16:19:29.97:291,30,0	0/0:22,0:23:49.72:0,50,355	0/0:28,0:28:56.56:0,57,415	0/0:16,1:17:6.53:0,7,209	0/0:23,0:23:65.33:0,65,469	0/0:18,0:18:50.63:0,51,365	0/0:17,1:18:18.55:0,19,299	0/0:27,1:29:32.41:0,32,390	0/0:27,0:27:56.25:0,56,398	1/1:4,11:15:13.17:272,13,0	1/1:4,17:21:40.78:383,41,0	1/1:11,12:23:14.15:299,14,0	1/1:0,10:10:18.03:175,18,0	0/0:18,1:19:18.51:0,19,297	0/0:22,0:22:53.63:0,54,389	0/0:8,0:8:20.88:0,21,153
chr10	74041716	.	T	TTTTTGTTTTG	23159.90	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=1.386;DP=765;FS=20.962;HRun=0;HaplotypeScore=217.1686;InbreedingCoeff=0.9993;MQ=70.12;MQ0=1;MQRankSum=-16.808;QD=78.78;ReadPosRankSum=-3.722;VQSLOD=2.5858;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,25:37:57.20:2755,57,0	0/0:9,0:9:24.08:0,24,699	0/0:36,0:26:30.48:0,30,679	0/0:33,0:29:41.49:0,41,854	0/0:32,0:32:69.24:0,69,2059	0/0:28,0:28:66.23:0,66,1921	0/0:27,0:27:66.21:0,66,1858	0/0:31,0:31:72.17:0,72,1832	0/0:18,0:18:45.15:0,45,1290	1/1:38,13:51:99:4098,114,0	1/1:21,3:23:51.17:1855,51,0	1/1:12,15:28:60.20:2775,60,0	1/1:16,17:33:63.21:2946,63,0	0/0:29,0:29:72.24:0,72,2121	0/0:27,0:27:69.12:0,69,1865	0/0:29,0:29:75.23:0,75,2083	0/0:30,0:30:69.22:0,69,1930	1/1:7,12:20:27.09:1105,27,0	0/0:31,0:31:66.14:0,66,1536	0/0:20,0:20:57.19:0,57,1570	0/0:21,0:21:39.13:0,39,1144	1/1:13,13:29:49.04:2058,49,0	1/1:5,20:25:54.65:2577,55,0	1/1:6,13:20:27.09:1129,27,0	1/1:22,5:27:57.11:1862,57,0	0/0:27,0:27:69.24:0,69,2016	0/0:27,0:27:66.22:0,66,1912	0/0:16,0:16:42.11:0,42,1132
chr10	74041735	.	G	GT	1831.58	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.207;DP=726;FS=0.480;HRun=9;HaplotypeScore=150.0073;InbreedingCoeff=0.9229;MQ=67.72;MQ0=1;MQRankSum=-7.652;QD=20.13;ReadPosRankSum=-1.828;VQSLOD=1.7320;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:25:37.87:0,38,484	0/0:11,0:11:23.96:0,24,201	0/0:35,1:26:1.49:0,1,309	0/0:33,0:28:20.29:0,20,330	0/0:29,0:29:51.59:0,52,572	0/0:23,0:23:56.96:0,57,491	0/0:24,0:24:68.98:0,69,599	0/0:38,0:38:86.80:0,87,745	0/0:20,0:20:47.93:0,48,407	1/1:18,26:44:90.38:924,90,0	1/1:6,18:24:58.50:615,59,0	0/0:29,0:29:83.89:0,84,707	0/0:35,0:35:98.92:0,99,848	0/0:28,0:28:77.98:0,78,677	0/0:31,0:31:83.96:0,84,726	0/0:31,0:31:77.97:0,78,677	0/0:29,0:29:77.96:0,78,672	0/0:16,0:16:27.10:0,27,299	0/0:23,0:23:47.87:0,48,394	0/0:28,0:28:67.20:0,67,575	0/0:17,0:17:44.99:0,45,391	0/0:23,0:23:59.93:0,60,510	0/0:24,0:25:64.88:0,65,539	0/0:12,0:12:20.54:0,21,179	1/1:7,16:23:40.52:434,41,0	0/0:27,0:27:62.95:0,63,543	0/0:24,0:25:71.01:0,71,601	0/0:16,0:16:44.97:0,45,387
chr10	74042031	.	GTTGT	G	4831.75	PASS	AB=0.923;AC=9;AF=0.161;AN=56;BaseQRankSum=12.421;DP=819;FS=2.882;HRun=0;HaplotypeScore=140.2139;InbreedingCoeff=0.8070;MQ=69.14;MQ0=1;MQRankSum=-1.017;QD=28.26;ReadPosRankSum=1.046;VQSLOD=5.0406;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,49:65:99:2133,132,0	0/0:9,0:9:21.07:0,21,508	0/0:28,1:22:9.03:0,9,207	0/0:32,0:30:23.06:0,23,667	0/0:27,0:27:45.14:0,45,1030	0/0:29,0:29:72.25:0,72,1740	0/0:39,1:40:29.79:0,30,1743	0/0:29,0:29:21.07:0,21,508	0/0:28,1:29:14.73:0,15,1353	1/1:8,22:30:66.23:1064,66,0	1/1:8,15:22:39.13:629,39,0	0/0:33,0:33:63.22:0,63,1481	0/0:26,0:26:60.21:0,60,1441	0/0:33,1:34:26.78:0,27,1674	0/1:22,2:24:36.76:37,0,1193	0/0:33,0:33:66.23:0,66,1594	0/0:21,0:21:48.16:0,48,1158	0/0:8,0:27:60.21:0,60,1055	0/0:25,0:24:33.10:0,33,749	0/0:23,1:24:2.69:0,3,1064	0/0:52,0:52:99:0,108,2517	0/0:28,0:28:72.23:0,72,1624	0/0:28,0:28:55.70:0,56,1220	0/0:34,0:34:81.28:0,81,1957	1/1:5,24:29:60.20:969,60,0	0/0:32,0:32:66.22:0,66,1548	0/0:19,0:19:39.12:0,39,893	0/0:8,0:8:21.07:0,21,506
chr10	74044620	.	G	GAA	4033.84	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.315;DP=575;FS=14.524;HRun=8;HaplotypeScore=93.9541;InbreedingCoeff=0.9499;MQ=71.42;MQ0=0;MQRankSum=-2.309;QD=23.32;ReadPosRankSum=2.210;VQSLOD=1.4823;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:28:66.23:1048,66,0	0/0:5,0:5:15.04:0,15,167	0/0:30,0:20:16.13:0,16,239	0/0:23,0:17:0.11:0,0,196	0/0:21,0:21:57.14:0,57,635	0/0:13,0:13:39.09:0,39,425	0/0:15,0:15:33.07:0,33,368	0/0:33,0:33:31.97:0,32,601	0/0:15,0:15:36.10:0,36,401	1/1:4,24:30:78.24:1187,78,0	1/1:2,15:17:46.40:716,46,0	1/1:3,0:12:22.33:77,22,0	1/1:2,0:11:19.28:65,19,0	0/0:19,0:19:50.70:0,51,568	0/0:16,0:16:42.11:0,42,467	0/0:14,0:14:33.06:0,33,359	0/0:46,0:47:99:0,123,1365	0/0:44,0:44:99:0,114,1256	0/0:30,0:29:78.19:0,78,861	0/0:17,0:17:45.10:0,45,492	0/0:9,0:9:21.03:0,21,224	1/1:2,0:13:27.45:95,27,0	1/1:2,0:20:44.46:152,44,0	1/1:3,0:24:47.41:163,47,0	1/1:1,15:17:35.48:531,35,0	0/0:22,1:23:18.57:0,19,626	0/0:21,0:21:57.12:0,57,624	0/0:6,0:6:15.03:0,15,167
chr10	74045031	.	A	AC	12855.08	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-17.001;DP=814;FS=0.000;HRun=3;HaplotypeScore=74.2112;InbreedingCoeff=0.9707;MQ=87.84;MQ0=0;MQRankSum=-4.311;QD=37.59;ReadPosRankSum=4.492;VQSLOD=5.0892;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,53:56:99:2100,151,0	0/0:15,0:15:42.12:0,42,493	0/0:26,0:25:69.18:0,69,810	0/0:31,0:31:85.17:0,85,976	0/0:21,0:21:63.19:0,63,756	0/0:24,0:24:72.22:0,72,864	0/0:22,0:22:66.19:0,66,781	0/0:36,0:36:99:0,102,1195	0/0:35,0:35:99:0,105,1260	1/1:2,29:31:87.29:1216,87,0	1/1:1,17:18:54.17:738,54,0	1/1:1,38:39:99:1374,99,0	1/1:1,43:44:99:1636,117,0	0/0:27,0:27:78.23:0,78,924	0/0:31,0:31:90.25:0,90,1057	0/0:43,0:43:99:0,123,1476	0/0:27,0:27:81.23:0,81,960	1/1:1,25:26:72.24:1008,72,0	0/0:27,0:27:72.22:0,72,864	0/0:20,0:20:60.18:0,60,720	0/0:25,0:25:72.20:0,72,851	1/1:0,27:27:75.25:1049,75,0	1/1:2,25:27:72.24:1004,72,0	1/1:2,48:50:99:1932,138,0	1/1:2,22:23:57.19:798,57,0	0/0:27,2:29:3.26:0,3,888	0/0:29,0:29:81.25:0,81,971	0/0:4,0:4:12.04:0,12,144
chr10	74046037	.	GCC	G	674.16	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.350;DP=601;FS=1.758;HRun=10;HaplotypeScore=76.3821;InbreedingCoeff=0.9936;MQ=75.12;MQ0=1;MQRankSum=-0.019;QD=24.08;ReadPosRankSum=2.412;VQSLOD=3.5381;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:30:69.23:0,69,1069	0/0:8,0:8:21.04:0,21,306	0/0:14,0:14:38.62:0,39,548	0/0:16,0:16:33.06:0,33,434	0/0:21,0:23:56.67:0,57,847	0/0:20,0:21:50.63:0,51,721	0/0:27,0:28:77.75:0,78,1195	0/0:18,0:18:33.10:0,33,500	0/0:12,0:14:41.11:0,41,586	0/0:18,0:22:42.96:0,43,536	0/0:17,0:18:44.64:0,45,672	0/0:18,0:19:50.62:0,51,700	0/0:17,0:18:48.14:0,48,719	0/0:23,0:27:61.13:0,61,792	0/0:31,0:34:91.69:0,92,1255	0/0:19,0:19:54.17:0,54,824	0/0:36,0:38:92.78:0,93,1386	1/1:0,28:28:69.18:769,69,0	0/0:14,0:15:30.07:0,30,424	0/0:18,0:18:36.10:0,36,525	0/0:33,0:32:81.26:0,81,1242	0/0:12,0:12:30.08:0,30,432	0/0:11,0:11:30.09:0,30,454	0/0:32,0:33:77.72:0,78,1168	0/0:15,0:16:41.62:0,42,604	0/0:26,0:28:59.16:0,59,850	0/0:13,0:14:41.11:0,41,582	0/0:19,0:24:59.67:0,60,856
chr10	74046399	.	TAAA	T	1766.48	PASS	AB=0.677;AC=16;AF=0.286;AN=56;BaseQRankSum=11.911;DP=518;FS=3.971;HRun=16;HaplotypeScore=101.2998;InbreedingCoeff=0.8382;MQ=63.96;MQ0=4;MQRankSum=-0.202;QD=11.62;ReadPosRankSum=5.422;VQSLOD=1.1216;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,22:29:58.97:604,59,0	0/0:11,0:11:30.09:0,30,472	0/0:24,0:14:17.76:0,18,146	0/0:17,0:7:6.02:0,6,83	0/0:24,0:25:47.84:0,48,623	0/0:13,0:17:37.31:0,37,507	0/0:18,0:20:38.57:0,39,524	0/0:24,0:24:42.11:0,42,644	0/0:12,0:12:33.07:0,33,487	1/1:2,15:18:47.88:466,48,0	1/1:10,5:15:17.72:173,18,0	1/1:4,2:14:7.53:104,8,0	1/1:5,0:19:27.04:92,27,0	0/0:10,0:14:33.03:0,33,439	0/0:22,0:23:60.13:0,60,914	0/0:18,0:22:49.93:0,50,744	0/0:17,0:19:48.05:0,48,700	0/0:16,0:18:36.09:0,36,478	0/0:12,0:15:26.96:0,27,303	0/0:13,0:15:39.01:0,39,524	0/0:9,0:10:18.03:0,18,225	0/1:6,0:11:0.06:66,0,0	0/1:6,0:11:10.54:37,0,11	1/1:2,2:14:22.41:121,22,0	1/1:8,11:19:12.31:300,12,0	0/0:23,0:24:55.30:0,55,686	0/0:33,0:34:90.07:0,90,1195	0/0:17,0:19:50.09:0,50,638
chr10	74046412	.	A	AAAG	400.27	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.895;DP=587;FS=4.571;HRun=0;HaplotypeScore=124.6819;InbreedingCoeff=0.7817;MQ=62.85;MQ0=8;MQRankSum=-1.204;QD=22.24;ReadPosRankSum=0.314;VQSLOD=3.6283;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:72.66:0,73,637	0/0:11,0:11:32.65:0,33,374	0/0:24,0:9:12.02:0,12,110	0/0:18,0:8:7.68:0,8,63	0/0:26,0:26:70.74:0,71,690	0/0:23,0:23:50.87:0,51,496	0/0:20,0:20:40.86:0,41,454	0/0:31,0:31:80.84:0,81,765	0/0:15,0:15:42.02:0,42,437	0/0:21,0:21:45.72:0,46,430	0/0:17,0:17:20.56:0,21,214	0/0:16,0:16:45.02:0,45,406	0/0:27,0:27:50.56:0,51,525	0/0:17,0:17:42.31:0,42,419	0/0:27,0:27:78.06:0,78,873	0/0:21,0:21:53.57:0,54,553	0/0:20,0:20:31.07:0,31,490	1/1:4,12:18:8:482,8,0	0/0:21,0:21:50.90:0,51,463	0/0:18,0:18:29.71:0,30,381	0/0:8,0:8:10.31:0,10,185	0/0:13,0:14:20.24:0,20,226	0/0:13,0:12:19.65:0,20,226	0/0:15,0:15:35.87:0,36,316	0/0:25,0:24:62.70:0,63,515	0/0:33,0:32:57.03:0,57,642	0/0:39,0:38:91.38:0,91,933	0/0:19,0:19:46.77:0,47,477
chr10	74048087	.	GTTGTTTGT	G	9328.27	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.835;DP=790;FS=11.758;HRun=0;HaplotypeScore=205.4316;InbreedingCoeff=0.9972;MQ=64.46;MQ0=2;MQRankSum=-14.968;QD=39.03;ReadPosRankSum=-0.320;VQSLOD=3.1096;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,28:40:54.18:1346,54,0	0/0:8,0:8:21.06:0,21,785	0/0:31,0:27:51.17:0,51,1839	0/0:22,0:20:47.16:0,47,1312	0/0:21,0:21:57.20:0,57,2202	0/0:17,0:17:48.16:0,48,2012	0/0:30,0:30:63.22:0,63,2587	0/0:50,0:50:99:0,99,3553	0/0:31,0:31:75.26:0,75,3111	1/1:6,23:29:57.15:1308,57,0	1/1:4,19:23:42.14:1034,42,0	1/1:4,23:27:54.19:1383,54,0	1/1:7,29:36:69.14:1777,69,0	0/0:34,0:34:84.29:0,84,3452	0/0:34,0:34:90.30:0,90,3539	0/0:35,0:35:78.23:0,78,3140	0/0:36,0:36:87.30:0,87,3546	0/0:9,0:21:48.16:0,48,1581	0/0:20,0:20:39.13:0,39,1430	0/0:26,0:26:63.22:0,63,2511	0/0:49,0:49:99:0,129,5229	1/1:4,13:17:27.09:629,27,0	1/1:4,11:15:23.89:625,24,0	1/1:13,16:29:18.06:451,18,0	1/1:6,17:23:30.10:776,30,0	0/0:33,0:33:69.23:0,69,2669	0/0:44,0:44:99:0,108,4120	0/0:9,0:9:24.08:0,24,1011
chr10	74048395	.	ATTGTCCCTCC	A	17073.69	PASS	AB=0.528;AC=17;AF=0.304;AN=56;BaseQRankSum=19.797;DP=840;FS=2.128;HRun=0;HaplotypeScore=272.1896;InbreedingCoeff=0.9154;MQ=80.50;MQ0=0;MQRankSum=-19.752;QD=68.57;ReadPosRankSum=-0.199;VQSLOD=4.3053;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,29:37:69.15:2098,69,0	0/0:16,0:16:48.16:0,48,2520	0/0:23,0:23:54.19:0,54,2391	0/0:31,0:31:81.28:0,81,3529	0/0:22,0:22:60.21:0,60,3030	0/0:32,0:32:93.32:0,93,4773	0/0:27,0:27:72.23:0,72,3660	0/0:29,0:29:84.29:0,84,4234	0/0:30,0:30:87.30:0,87,4407	1/1:4,34:38:93.32:3005,93,0	1/1:2,14:16:36.09:864,36,0	1/1:7,33:40:93.32:2951,93,0	1/1:6,37:43:99:3558,108,0	0/0:41,0:41:99:0,120,6074	0/0:49,0:49:99:0,141,7167	0/0:43,0:43:99:0,129,6807	0/0:32,0:32:96.32:0,96,4883	0/0:23,0:23:66.23:0,66,3398	0/0:20,0:20:60.21:0,60,3058	0/0:38,0:38:99:0,108,5360	0/0:47,0:46:99:0,132,6782	1/1:3,21:24:57.11:1539,57,0	1/1:3,14:17:33.07:948,33,0	0/1:2,17:19:99:1102,0,109	1/1:3,12:15:33.07:1008,33,0	0/0:35,0:35:99:0,102,5165	0/0:42,0:41:99:0,120,6047	0/0:11,0:11:33.11:0,33,1731
chr10	74049774	.	ATGTC	A	175.65	PASS	AB=0.941;AC=5;AF=0.114;AN=44;BaseQRankSum=2.082;DP=628;FS=0.000;HRun=0;HaplotypeScore=38.5728;InbreedingCoeff=0.3404;MQ=23.42;MQ0=280;MQRankSum=-0.712;QD=3.31;ReadPosRankSum=-2.100;VQSLOD=0.8438;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:7:6.02:0,6,133	0/0:13,0:8:3:0,3,79	./.	./.	0/0:27,0:6:3.01:0,3,78	./.	1/1:20,0:3:2.99:24,3,0	0/0:26,0:3:3.01:0,3,79	0/0:34,0:18:9.03:0,9,174	0/1:15,1:6:37.03:37,0,316	./.	0/0:23,0:10:18.06:0,18,473	0/0:28,0:18:24.97:0,25,632	0/0:25,0:11:3.01:0,3,79	0/0:53,0:40:15.04:0,15,336	0/0:30,0:16:15.04:0,15,341	0/0:16,0:11:3.01:0,3,79	0/0:18,0:7:2.86:0,3,78	0/0:17,0:7:21.07:0,21,554	0/0:21,0:5:6.02:0,6,157	0/0:41,0:13:12.04:0,12,304	./.	./.	0/0:16,0:5:0:0,0,0	1/1:13,4:9:12.04:220,12,0	0/0:31,0:7:18.06:0,18,470	0/0:32,0:20:20.94:0,21,506	0/0:20,0:11:18.06:0,18,475
chr10	74049835	.	ATGTC	A	228.93	PASS	AC=4;AF=0.100;AN=40;BaseQRankSum=3.055;DP=512;FS=7.903;HRun=0;HaplotypeScore=27.7473;InbreedingCoeff=0.4131;MQ=18.39;MQ0=291;MQRankSum=-1.911;QD=15.26;ReadPosRankSum=-0.247;VQSLOD=0.8581;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:2:3.01:0,3,79	./.	./.	./.	0/0:20,0:5:3.01:0,3,79	0/0:34,0:4:5.97:0,6,85	0/0:23,0:2:2.99:0,3,24	0/0:24,0:9:12.04:0,12,311	./.	1/1:3,6:5:15.05:272,15,0	0/0:9,0:5:12.04:0,12,234	0/0:16,0:10:3.89:0,4,36	0/0:30,0:12:12:0,12,315	0/0:42,0:27:21.07:0,21,487	0/0:21,0:7:3.01:0,3,79	0/0:15,0:7:3.01:0,3,79	0/0:19,0:7:9.03:0,9,237	0/0:11,0:5:12.04:0,12,289	./.	0/0:40,0:6:9.03:0,9,236	./.	./.	0/0:12,0:3:0:0,0,0	1/1:5,1:2:3.01:55,3,0	0/0:32,0:3:6.02:0,6,158	0/0:28,0:12:18.06:0,18,446	0/0:18,0:6:15.05:0,15,395
chr10	74049844	.	T	TC	81.05	PASS	AC=2;AF=0.056;AN=36;BaseQRankSum=1.357;DP=497;FS=8.316;HRun=4;HaplotypeScore=24.4689;InbreedingCoeff=0.3839;MQ=20.02;MQ0=277;MQRankSum=-2.569;QD=9.01;ReadPosRankSum=-1.672;VQSLOD=-0.6580;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:3:6.02:0,6,68	./.	./.	./.	0/0:21,0:6:3.01:0,3,34	0/0:35,0:6:8.98:0,9,88	./.	0/0:23,0:10:12.03:0,12,136	./.	0/0:8,0:5:13.18:0,13,61	1/1:4,5:5:12.04:164,12,0	./.	0/0:33,0:12:12.02:0,12,136	0/0:45,0:31:21.06:0,21,238	0/0:21,0:6:3.01:0,3,34	0/0:16,0:8:9.02:0,9,101	0/0:22,0:10:9.03:0,9,102	0/0:8,0:4:12.03:0,12,136	0/0:11,0:3:2.94:0,3,18	0/0:44,0:10:21.06:0,21,235	./.	./.	./.	0/0:5,0:1:2.84:0,3,14	0/0:31,0:4:9.03:0,9,102	0/0:26,0:12:19.29:0,19,233	0/0:15,0:5:15.04:0,15,170
chr10	74050048	.	ATGTC	A	307.85	PASS	AB=1.000;AC=11;AF=0.393;AN=28;BaseQRankSum=2.164;DP=480;FS=8.671;HRun=0;HaplotypeScore=19.2295;InbreedingCoeff=0.5283;MQ=13.31;MQ0=342;MQRankSum=0.197;QD=5.31;ReadPosRankSum=-0.197;VQSLOD=-0.5564;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,4:2:3.01:55,3,0	0/1:10,0:7:0:0,0,0	./.	./.	1/1:19,0:8:0.89:2,1,0	./.	./.	./.	./.	1/1:1,4:4:12.03:191,12,0	1/1:2,5:6:6.02:110,6,0	0/0:17,0:9:6.01:0,6,158	0/0:12,0:8:11.92:0,12,188	./.	0/0:36,0:8:15.05:0,15,394	./.	./.	0/0:15,0:4:6.02:0,6,158	./.	./.	0/0:34,0:2:3.01:0,3,79	0/0:12,0:6:3.01:0,3,79	0/0:6,0:3:6.02:0,6,115	./.	1/1:1,6:7:3.48:56,3,0	0/0:22,0:2:6.02:0,6,158	./.	./.
chr10	74052758	.	CA	C	1228.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.425;DP=695;FS=1.396;HRun=2;HaplotypeScore=70.2750;InbreedingCoeff=0.9978;MQ=83.94;MQ0=0;MQRankSum=-1.361;QD=30.70;ReadPosRankSum=2.459;VQSLOD=3.3873;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,37:40:99:1323,102,0	0/0:9,0:9:27.09:0,27,404	0/0:27,0:27:81.02:0,81,1111	0/0:27,0:27:72.18:0,72,953	0/0:17,0:17:48.15:0,48,697	0/0:23,0:23:66.18:0,66,928	0/0:31,0:31:90.27:0,90,1306	0/0:32,0:32:84.27:0,84,1225	0/0:23,0:23:66.22:0,66,970	0/0:26,0:26:75.25:0,75,1107	0/0:13,0:13:36.12:0,36,538	0/0:27,0:27:81.26:0,81,1193	0/0:30,0:30:87.27:0,87,1261	0/0:20,0:20:57.19:0,57,853	0/0:30,0:30:84.27:0,84,1236	0/0:31,0:31:90.26:0,90,1321	0/0:29,0:28:87.29:0,87,1301	0/0:22,0:22:66.22:0,66,989	0/0:16,0:16:48.16:0,48,712	0/0:17,0:17:48.16:0,48,715	0/0:51,0:51:99:0,150,2203	0/0:24,0:24:66.18:0,66,962	0/0:14,0:14:42.12:0,42,599	0/0:25,0:25:75.22:0,75,1082	0/0:20,0:20:54.18:0,54,795	0/0:31,0:31:87.29:0,87,1303	0/0:31,0:31:84.28:0,84,1256	0/0:9,0:9:27.09:0,27,404
chr10	74055382	.	TACACAC	T	4529	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.086;DP=853;FS=0.416;HRun=0;HaplotypeScore=215.1548;InbreedingCoeff=0.9142;MQ=59.48;MQ0=8;MQRankSum=-13.816;QD=16.53;ReadPosRankSum=5.780;VQSLOD=4.0744;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:42:12.06:437,12,0	0/0:13,0:15:36.12:0,36,1025	0/0:56,0:29:29.75:0,30,749	0/0:47,0:32:61.72:0,62,1668	0/0:20,0:20:51.11:0,51,1317	0/0:28,0:28:63.19:0,63,1791	0/0:33,0:34:78.24:0,78,1877	0/0:43,1:44:16.54:0,17,2156	0/0:30,0:31:72.25:0,72,2275	1/1:9,0:37:54.71:860,55,0	1/1:4,0:19:2.13:194,2,0	1/1:9,22:33:51.08:979,51,0	1/1:12,26:37:45.15:961,45,0	0/0:29,0:31:81.28:0,81,2476	0/0:30,0:30:81.23:0,81,2392	0/0:24,0:24:60.21:0,60,1976	0/0:18,0:19:54.16:0,54,1514	0/0:22,0:25:60.09:0,60,1605	0/0:23,0:23:47.93:0,48,1272	0/0:22,0:24:60.19:0,60,1752	0/0:48,0:50:99:0,126,3623	1/1:6,16:23:18.06:362,18,0	1/1:5,18:23:2.91:64,3,0	1/1:13,21:33:5.98:128,6,0	1/1:3,0:24:39.13:545,39,0	0/0:24,0:27:63.21:0,63,1767	0/0:29,0:31:83.61:0,84,2538	0/0:18,0:18:48.14:0,48,1467
chr10	74056444	.	TTGCAGTGAGTCCCTC	T	8218.34	PASS	AB=0.938;AC=9;AF=0.161;AN=56;BaseQRankSum=13.184;DP=685;FS=1.530;HRun=0;HaplotypeScore=281.4781;InbreedingCoeff=0.8622;MQ=84.10;MQ0=0;MQRankSum=-12.107;QD=68.49;ReadPosRankSum=1.304;VQSLOD=4.3873;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:27:48.04:1780,48,0	0/0:7,0:7:21.07:0,21,1547	0/0:23,0:23:65.59:0,66,3721	0/0:20,0:20:47.62:0,48,2424	0/0:19,0:19:54.19:0,54,3769	0/0:27,0:26:81.28:0,81,5574	0/0:48,0:48:99:0,132,9236	0/0:19,0:19:51.17:0,51,3055	0/0:27,0:27:81.26:0,81,5647	1/1:6,23:29:69.15:2611,69,0	1/1:3,6:9:14.98:553,15,0	0/0:26,0:26:78.27:0,78,5656	0/0:17,0:17:48.12:0,48,3159	0/0:27,0:27:78.27:0,78,5438	0/0:26,0:26:75.26:0,75,5442	0/0:27,0:27:78.27:0,78,5291	0/0:28,0:28:81.28:0,81,5524	0/0:25,0:25:72.25:0,72,5132	0/0:16,0:16:42.14:0,42,2933	0/0:20,0:20:57.20:0,57,4182	0/0:54,0:54:99:0,154,10739	0/0:18,0:18:51.18:0,51,3511	0/0:18,0:18:51.18:0,51,3666	0/0:34,0:34:99:0,102,6906	1/1:3,22:25:72.20:3084,72,0	0/1:28,2:30:99:192,0,4855	0/0:22,0:21:63.22:0,63,4233	0/0:17,0:17:39.13:0,39,2682
chr10	74058936	.	G	GC	7700.60	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-15.069;DP=671;FS=1.014;HRun=4;HaplotypeScore=61.0938;InbreedingCoeff=0.9998;MQ=92.54;MQ0=0;MQRankSum=-6.396;QD=37.20;ReadPosRankSum=3.067;VQSLOD=4.8344;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:66.22:903,66,0	0/0:10,0:10:27.08:0,27,306	0/0:40,0:40:84.29:0,84,1024	0/0:20,0:20:37.24:0,37,478	0/0:36,0:36:99:0,99,1113	0/0:21,0:21:57.15:0,57,636	0/0:23,0:23:66.19:0,66,748	0/0:25,0:25:69.19:0,69,776	0/0:20,0:20:57.16:0,57,647	1/1:0,21:21:63.18:828,63,0	1/1:1,24:25:69.22:929,69,0	1/1:0,24:24:69.23:944,69,0	1/1:2,17:19:48.16:657,48,0	0/0:24,0:24:72.21:0,72,817	0/0:19,0:18:57.12:0,57,632	0/0:22,0:22:66.19:0,66,749	0/0:28,0:28:78.22:0,78,884	0/0:20,0:20:57.16:0,57,645	0/0:22,0:22:54.14:0,54,604	0/0:24,0:24:72.21:0,72,817	0/0:47,0:47:99:0,129,1463	1/1:0,25:25:75.25:1025,75,0	1/1:0,24:24:69.23:941,69,0	1/1:5,23:28:69.23:943,69,0	1/1:1,14:15:39.13:532,39,0	0/0:14,0:14:42.11:0,42,470	0/0:36,0:36:99:0,99,1123	0/0:13,0:13:36.10:0,36,408
chr10	74061091	.	A	AACACACACACACACACACAC	6081.50	PASS	AB=1.000;AC=19;AF=0.352;AN=54;BaseQRankSum=6.688;DP=457;FS=15.946;HRun=0;HaplotypeScore=238.9325;InbreedingCoeff=0.8588;MQ=59.84;MQ0=4;MQRankSum=-6.378;QD=38.98;ReadPosRankSum=-3.039;VQSLOD=2.3426;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:29:39.87:613,40,0	0/0:5,0:5:15.05:0,15,715	0/0:24,0:17:45.12:0,45,845	0/0:17,0:9:21.03:0,21,336	0/0:16,0:16:48.12:0,48,2260	0/0:13,0:13:39.11:0,39,1779	0/1:15,0:15:24.69:25,0,1182	0/0:28,0:28:78.16:0,78,1844	0/0:16,0:16:45.09:0,45,1831	1/1:15,0:15:32.96:1430,33,0	1/1:8,0:15:3.01:182,3,0	1/1:10,0:10:15.05:1343,15,0	1/1:7,1:7:13.30:593,13,0	0/0:18,0:18:51.11:0,51,1617	0/0:25,0:25:75.23:0,75,3628	0/0:15,0:15:42.10:0,42,1819	0/0:29,0:29:65.72:0,66,3800	1/1:15,0:15:22.96:616,23,0	0/0:19,0:19:54.11:0,54,1291	0/0:11,0:11:27.08:0,27,1216	0/0:18,0:18:54.15:0,54,2235	./.	1/1:14,0:13:5.91:294,6,0	1/1:12,0:10:15.48:405,15,0	1/1:23,0:23:18.49:581,18,0	0/0:20,0:20:57.14:0,57,2177	0/0:19,0:19:57.09:0,57,2232	0/0:6,0:6:18.03:0,18,742
chr10	74061241	.	CT	C	131.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.559;DP=527;FS=1.508;HRun=3;HaplotypeScore=56.2543;InbreedingCoeff=0.9806;MQ=71.54;MQ0=5;MQRankSum=-0.500;QD=13.17;ReadPosRankSum=0.058;VQSLOD=2.2566;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.18:0,63,844	0/0:9,0:9:24.07:0,24,317	0/0:22,0:11:22.40:0,22,192	0/0:27,0:18:34.36:0,34,446	0/0:14,0:14:42.10:0,42,536	0/0:15,0:15:42.11:0,42,553	0/0:15,0:15:42.11:0,42,537	0/0:31,0:31:84.19:0,84,1096	0/0:26,0:26:75.21:0,75,996	0/0:23,0:23:69.10:0,69,868	0/0:15,0:15:45.14:0,45,603	0/0:17,0:17:48.14:0,48,632	0/0:13,0:13:39.12:0,39,527	0/0:26,0:26:75.22:0,75,997	0/0:34,0:34:98.81:0,99,1286	0/0:13,0:13:39.11:0,39,528	0/0:20,0:20:60.15:0,60,783	1/1:0,10:10:18.06:222,18,0	0/0:23,0:23:63.20:0,63,864	0/0:21,0:21:60.20:0,60,830	0/0:20,0:20:57.15:0,57,746	0/0:18,0:18:51.14:0,51,665	0/0:9,0:9:27.09:0,27,377	0/0:19,0:19:57.13:0,57,757	0/0:22,0:22:66.19:0,66,865	0/0:21,0:21:60.19:0,60,823	0/0:15,0:15:45.14:0,45,612	0/0:7,0:7:20.10:0,20,257
chr10	74062116	.	GAA	G	1077.18	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=8.362;DP=393;FS=10.774;HRun=5;HaplotypeScore=59.3029;InbreedingCoeff=0.7864;MQ=67.17;MQ0=11;MQRankSum=-0.090;QD=17.66;ReadPosRankSum=1.228;VQSLOD=0.0864;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,5:11:9.03:116,9,0	0/0:5,0:5:12.04:0,12,220	0/0:11,0:8:16.38:0,16,218	0/1:8,0:5:8.89:9,0,64	0/0:26,0:26:72.25:0,72,1242	0/0:18,0:18:51.15:0,51,798	0/0:14,0:14:37.35:0,37,499	0/0:13,0:13:30.10:0,30,454	0/0:6,0:6:9.97:0,10,138	1/1:3,9:8:18.04:232,18,0	1/1:1,11:11:24.08:334,24,0	0/0:12,0:12:4.47:0,4,229	0/0:17,0:16:42.14:0,42,639	0/0:19,0:19:51.17:0,51,858	0/0:16,0:16:42.13:0,42,683	0/0:18,0:18:51.17:0,51,849	0/0:22,0:22:61.83:0,62,1043	0/0:16,0:16:24.28:0,24,654	0/0:12,0:10:30.09:0,30,492	0/0:14,0:14:42.12:0,42,648	0/0:10,0:10:27.09:0,27,447	0/0:14,0:14:33.11:0,33,516	0/0:15,2:16:36.11:0,36,528	0/0:11,1:11:29.99:0,30,410	1/1:0,15:13:39.13:544,39,0	0/0:12,0:12:33.11:0,33,530	0/0:25,0:25:75.26:0,75,1286	0/0:3,0:2:5.75:0,6,67
chr10	74062118	.	A	AAG	1190.45	PASS	AB=0.917;AC=11;AF=0.196;AN=56;BaseQRankSum=9.081;DP=391;FS=9.238;HRun=0;HaplotypeScore=62.1803;InbreedingCoeff=0.6041;MQ=65.81;MQ0=11;MQRankSum=-2.762;QD=13.08;ReadPosRankSum=-0.127;VQSLOD=2.3353;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,6:9:9.03:144,9,0	0/0:4,0:4:12.04:0,12,183	0/0:10,0:7:16.38:0,16,218	0/1:8,0:5:8.89:9,0,64	0/0:26,0:26:72.24:0,72,1096	0/0:18,0:18:51.15:0,51,734	0/0:14,0:14:21.21:0,21,415	0/0:13,0:13:30.10:0,30,454	0/0:6,0:6:15.52:0,16,212	1/1:11,1:8:22.29:277,22,0	1/1:11,1:11:24.08:336,24,0	0/1:9,3:12:30.72:31,0,208	0/1:18,1:18:7.89:8,0,557	0/0:19,0:19:51.17:0,51,776	0/0:15,0:15:42.13:0,42,619	0/0:17,0:17:51.17:0,51,776	0/0:22,0:22:26.69:0,27,881	0/0:16,1:17:2.14:0,2,561	0/0:12,0:10:30.09:0,30,436	0/0:14,0:14:42.12:0,42,594	0/0:10,0:10:27.09:0,27,411	0/0:11,3:14:33.11:0,33,498	0/0:15,1:15:36.12:0,36,517	0/0:12,1:12:28.27:0,28,384	1/1:16,0:14:41.35:550,41,0	0/0:11,0:11:33.11:0,33,485	0/0:26,0:26:78.25:0,78,1165	0/0:3,0:2:5.75:0,6,58
chr10	74062211	.	AAG	A	109.25	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.272;DP=363;FS=1.753;HRun=0;HaplotypeScore=81.6320;InbreedingCoeff=0.8055;MQ=62.85;MQ0=8;MQRankSum=-3.397;QD=6.43;ReadPosRankSum=-1.972;VQSLOD=2.7125;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,6:6:12:136,12,0	0/0:5,0:5:15.04:0,15,228	0/0:43,0:17:13.08:0,13,175	0/0:35,0:11:25.16:0,25,223	0/0:3,0:3:9.03:0,9,152	0/0:9,0:9:21.05:0,21,324	0/0:9,0:9:24.05:0,24,353	0/0:17,0:16:27.09:0,27,433	0/0:9,0:9:21.07:0,21,355	0/0:15,0:15:40.46:0,40,376	0/0:5,0:5:9.24:0,9,106	0/0:10,0:10:18.06:0,18,299	0/0:16,0:16:36.45:0,36,499	0/0:10,0:10:21.07:0,21,355	0/0:12,0:12:33.11:0,33,536	0/0:11,0:11:33.11:0,33,537	0/0:21,0:21:51.09:0,51,745	1/1:3,6:8:6.90:79,7,0	0/0:16,0:16:36.12:0,36,608	0/0:4,0:4:12.04:0,12,203	0/0:8,0:7:12.04:0,12,204	0/0:11,0:11:24.08:0,24,403	0/0:13,0:13:26.68:0,27,413	0/0:12,0:11:12.93:0,13,200	0/0:15,0:15:32.98:0,33,417	0/0:18,0:18:39.10:0,39,632	0/0:9,0:9:15.52:0,16,255	0/0:10,0:10:27.09:0,27,449
chr10	74063323	.	AGC	A	51.91	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=4.127;DP=360;FS=5.467;HRun=0;HaplotypeScore=55.0369;InbreedingCoeff=0.4351;MQ=82.47;MQ0=0;MQRankSum=0.117;QD=1.33;ReadPosRankSum=2.209;VQSLOD=0.3620;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,9:21:14.84:139,15,0	0/0:5,0:5:2.92:0,3,17	0/0:16,1:15:18.20:0,18,228	0/0:16,0:15:22.77:0,23,117	0/0:10,0:10:20.89:0,21,224	0/0:10,0:10:2.98:0,3,22	0/0:25,0:26:47.92:0,48,515	0/0:12,0:12:35.81:0,36,358	0/0:11,0:11:14.91:0,15,163	0/0:15,0:16:1.73:0,2,15	0/1:5,0:5:0:0,0,0	0/0:13,0:13:12.03:0,12,181	0/0:14,0:14:29.81:0,30,247	0/0:13,0:13:23.98:0,24,285	0/0:6,0:6:8.93:0,9,94	0/0:5,0:5:11.91:0,12,91	0/0:16,0:16:29.76:0,30,351	0/0:21,0:21:23.48:0,23,158	0/0:10,0:10:0.23:0,0,106	0/0:8,0:8:5.70:0,6,64	0/0:26,0:26:29.83:0,30,209	0/0:7,0:8:14.96:0,15,122	0/0:11,0:11:12.32:0,12,81	0/0:16,0:16:11.93:0,12,137	1/1:13,0:13:0.15:0,0,0	0/0:13,0:13:2.63:0,3,26	0/0:10,0:9:20.99:0,21,270	0/0:8,0:8:11.82:0,12,86
chr10	74063563	.	T	TA	320.76	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.326;DP=570;FS=1.083;HRun=8;HaplotypeScore=50.7511;InbreedingCoeff=0.9618;MQ=74.78;MQ0=0;MQRankSum=-0.718;QD=16.04;ReadPosRankSum=1.136;VQSLOD=3.4560;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,1071	0/0:15,0:15:39.01:0,39,357	0/0:15,0:15:27.01:0,27,243	0/0:7,0:7:11.96:0,12,102	0/0:11,0:11:30.01:0,30,271	0/0:29,0:29:66.02:0,66,604	0/0:33,0:33:87.03:0,87,795	0/0:31,0:31:78.01:0,78,707	0/0:24,0:24:65.94:0,66,588	0/0:19,0:19:45.02:0,45,412	0/0:17,0:17:36.02:0,36,329	0/0:26,0:26:60.02:0,60,549	0/0:25,0:25:66.02:0,66,604	0/0:21,0:21:57.02:0,57,518	0/0:23,0:23:60.01:0,60,546	0/0:21,0:21:60.02:0,60,545	0/0:23,0:23:66.03:0,66,604	0/0:10,0:10:20.97:0,21,185	0/0:17,0:17:42.01:0,42,381	0/0:18,0:18:48.01:0,48,435	0/0:18,0:18:48.02:0,48,439	0/0:19,0:19:45.02:0,45,410	0/0:12,0:12:36.02:0,36,329	0/0:12,0:12:33.01:0,33,302	1/1:3,17:20:36.11:416,36,0	0/0:26,0:27:58.15:0,58,667	0/0:26,0:26:69:0,69,622	0/0:9,0:9:24.01:0,24,220
chr10	74066364	.	TC	T	2698.94	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.083;DP=774;FS=0.855;HRun=6;HaplotypeScore=74.7887;InbreedingCoeff=0.9991;MQ=80.40;MQ0=0;MQRankSum=-0.805;QD=25.95;ReadPosRankSum=2.488;VQSLOD=3.9584;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:38:90.22:967,90,0	0/0:12,0:12:30.08:0,30,378	0/0:22,0:22:57.18:0,57,726	0/0:20,0:20:43.77:0,44,528	0/0:35,0:35:96.30:0,96,1246	0/0:21,0:21:63.20:0,63,829	0/0:30,0:30:81.20:0,81,1030	0/0:31,0:31:72.20:0,72,896	0/0:26,0:26:78.25:0,78,1024	1/1:2,33:35:93.20:989,93,0	1/1:0,18:18:54.14:580,54,0	0/0:26,0:26:78.24:0,78,1007	0/0:27,0:27:72.23:0,72,947	0/0:44,0:44:99:0,126,1644	0/0:39,0:39:99:0,111,1459	0/0:31,1:32:81.26:0,81,1053	0/0:38,0:37:99:0,102,1327	0/0:40,0:40:99:0,114,1496	0/0:25,0:25:69.22:0,69,906	0/0:26,0:26:63.20:0,63,828	0/0:43,0:43:99:0,117,1493	0/0:23,0:23:60.17:0,60,761	0/0:20,0:20:57.17:0,57,735	0/0:19,0:19:51.10:0,51,623	1/1:2,11:12:30.07:322,30,0	0/0:27,1:28:49:0,49,981	0/0:33,0:33:87.28:0,87,1144	0/0:10,0:10:24.06:0,24,301
chr10	74071363	.	C	CTG	3598.49	PASS	AB=0.574;AC=9;AF=0.161;AN=56;BaseQRankSum=-9.695;DP=754;FS=0.914;HRun=0;HaplotypeScore=101.0939;InbreedingCoeff=0.8593;MQ=69.84;MQ0=4;MQRankSum=-1.120;QD=29.99;ReadPosRankSum=3.470;VQSLOD=5.5501;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:45:99:0,111,1284	0/0:9,0:9:27.08:0,27,327	0/0:34,0:27:35.16:0,35,384	0/0:40,0:38:51.99:0,52,754	0/0:25,0:25:60.13:0,60,699	0/0:25,0:25:57.14:0,57,666	0/0:25,0:28:71.69:0,72,782	0/0:30,0:30:57.17:0,57,683	0/0:22,0:22:66.19:0,66,787	0/0:31,0:31:78.23:0,78,930	0/0:12,0:12:32.69:0,33,373	0/1:8,23:30:12.58:811,0,13	1/1:4,20:24:45.15:726,45,0	0/0:27,0:27:46.37:0,46,744	0/0:29,0:29:66.20:0,66,800	0/0:32,0:32:80.89:0,81,914	0/0:41,0:41:96.22:0,96,1122	0/0:25,0:26:8.39:0,8,647	0/0:28,0:28:51.13:0,51,605	0/0:16,0:17:41.95:0,42,475	0/0:38,0:38:86.59:0,87,1001	1/1:2,11:14:27.09:434,27,0	1/1:2,12:14:30.10:482,30,0	1/1:8,29:36:72.24:1146,72,0	0/0:22,0:23:56.95:0,57,640	0/0:29,0:29:69.08:0,69,816	0/0:25,0:24:66.19:0,66,787	0/0:15,0:16:38.91:0,39,424
chr10	74076511	.	AC	A	1726.09	PASS	AB=0.934;AC=13;AF=0.232;AN=56;BaseQRankSum=6.588;DP=536;FS=1.443;HRun=10;HaplotypeScore=69.4673;InbreedingCoeff=0.4785;MQ=72.93;MQ0=0;MQRankSum=-0.357;QD=11.14;ReadPosRankSum=1.132;VQSLOD=3.1499;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,30:40:64.93:776,65,0	0/1:8,0:8:4.39:4,0,146	0/1:10,1:11:12.27:12,0,75	0/1:16,1:16:44.37:44,0,96	0/0:17,0:17:20.23:0,20,430	0/0:18,1:19:25.08:0,25,505	0/0:26,1:27:37.11:0,37,628	0/0:26,0:26:12.16:0,12,335	0/0:21,0:21:48.11:0,48,521	1/1:2,15:17:41.86:347,42,0	1/1:0,12:12:35.91:298,36,0	0/0:5,0:17:14.27:0,14,72	0/0:2,0:19:17.07:0,17,86	0/0:23,0:23:66.14:0,66,704	0/0:19,0:19:48.60:0,49,532	0/0:26,1:27:40.11:0,40,662	0/0:25,0:25:59.97:0,60,644	0/0:14,0:14:42.06:0,42,443	0/0:17,2:19:0.78:0,1,386	0/1:8,1:9:1.99:2,0,208	0/0:41,0:41:93.19:0,93,993	0/0:2,0:6:5.75:0,6,29	0/0:5,0:8:8.72:0,9,61	0/0:7,0:29:45.94:0,46,246	1/1:9,12:22:46.99:395,47,0	0/1:16,2:18:16:16,0,294	0/0:19,0:19:45.56:0,46,480	0/0:5,0:5:9.02:0,9,100
chr10	74079539	.	CCCTT	C	1864.33	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.121;DP=683;FS=3.079;HRun=0;HaplotypeScore=110.7374;InbreedingCoeff=0.9953;MQ=80.54;MQ0=0;MQRankSum=-2.390;QD=43.36;ReadPosRankSum=4.015;VQSLOD=3.9582;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,42:43:99:1959,105,0	0/0:8,0:8:24.08:0,24,617	0/0:14,0:14:39.13:0,39,945	0/0:21,0:21:56.85:0,57,1309	0/0:15,0:15:42.14:0,42,1093	0/0:19,0:19:57.20:0,57,1487	0/0:32,0:32:96.31:0,96,2502	0/0:30,0:30:81.27:0,81,2094	0/0:30,0:30:90.31:0,90,2344	0/0:28,0:28:81.28:0,81,2146	0/0:9,0:9:27.09:0,27,719	0/0:34,0:34:96.33:0,96,2538	0/0:31,0:31:93.32:0,93,2428	0/0:19,0:19:57.20:0,57,1508	0/0:38,0:38:99:0,114,2903	0/0:28,0:28:78.27:0,78,2060	0/0:37,0:37:99:0,105,2741	0/0:24,0:24:66.19:0,66,1653	0/0:23,0:23:63.22:0,63,1649	0/0:21,0:21:52.90:0,53,1489	0/0:39,0:39:99:0,111,2858	0/0:10,0:10:27.09:0,27,668	0/0:15,0:15:45.15:0,45,1170	0/0:39,0:39:99:0,108,2825	0/0:13,0:13:39.13:0,39,1008	0/0:34,0:34:99:0,102,2641	0/0:18,0:18:54.19:0,54,1430	0/0:11,0:11:30.10:0,30,729
chr10	74080475	.	G	GCC	985.97	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.970;DP=688;FS=0.000;HRun=4;HaplotypeScore=82.6263;InbreedingCoeff=0.9897;MQ=86.02;MQ0=0;MQRankSum=-2.977;QD=46.95;ReadPosRankSum=3.851;VQSLOD=2.4003;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,1837	0/0:7,0:7:18.06:0,18,240	0/0:22,0:22:54.08:0,54,650	0/0:24,0:26:48.50:0,48,608	0/0:24,0:24:60.17:0,60,769	0/0:22,0:22:63.20:0,63,832	0/0:31,0:31:75.24:0,75,1000	0/0:27,0:27:75.20:0,75,966	0/0:27,0:27:75.24:0,75,1000	0/0:20,0:20:57.18:0,57,748	0/0:9,0:9:27.09:0,27,360	0/0:15,0:15:42.14:0,42,560	0/0:22,0:22:66.20:0,66,865	0/0:31,0:31:90.23:0,90,1164	1/1:1,20:21:60.21:1081,60,0	0/0:33,0:33:99:0,99,1260	0/0:48,0:48:99:0,138,1838	0/0:29,0:29:84.26:0,84,1104	0/0:16,0:16:42.12:0,42,543	0/0:12,0:12:33.11:0,33,440	0/0:64,0:64:99:0,177,2308	0/0:17,0:17:42.13:0,42,559	0/0:15,0:15:42.14:0,42,560	0/0:28,0:28:84.21:0,84,1083	0/0:24,0:24:69.20:0,69,920	0/0:20,0:20:57.18:0,57,745	0/0:21,0:21:63.19:0,63,822	0/0:9,0:9:27.09:0,27,359
chr10	74082866	.	A	ACTTAGCAAACGTATTG	36055.31	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-1.344;DP=810;FS=5.184;HRun=0;HaplotypeScore=326.5770;InbreedingCoeff=0.9992;MQ=75.16;MQ0=0;MQRankSum=-20.238;QD=166.15;ReadPosRankSum=-0.043;VQSLOD=4.3277;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,10:26:66.23:4008,66,0	0/0:12,0:12:36.12:0,36,1614	0/0:25,0:24:60.07:0,60,2342	0/0:20,0:20:57.05:0,57,1928	0/0:25,0:25:75.21:0,75,2844	0/0:21,0:21:63.20:0,63,2693	0/0:32,0:32:90.27:0,90,3763	0/0:38,0:38:99:0,108,4584	0/0:31,0:31:93.31:0,93,4109	0/0:38,0:38:99:0,108,4927	0/0:24,0:24:66.21:0,66,2610	1/1:23,18:42:99:8267,126,0	1/1:15,21:39:99:7489,105,0	0/0:33,0:33:99:0,99,4234	0/0:39,0:39:99:0,117,5365	0/0:35,0:35:99:0,105,4507	0/0:25,0:25:69.22:0,69,2959	1/1:8,3:13:21.07:1592,21,0	0/0:17,0:17:51.18:0,51,2195	0/0:26,0:26:78.27:0,78,3499	0/0:42,0:42:99:0,120,5114	1/1:20,15:39:90.31:5871,90,0	1/1:15,14:30:78.27:5366,78,0	1/1:15,6:28:60.21:3461,60,0	0/0:19,0:19:47.88:0,48,2054	0/0:34,0:34:99:0,102,4534	0/0:33,0:33:93.28:0,93,4059	0/0:24,0:24:72.25:0,72,3409
chr10	74082890	.	T	TTTG	2403.70	PASS	AB=0.946;AC=9;AF=0.161;AN=56;BaseQRankSum=-5.204;DP=739;FS=1.881;HRun=0;HaplotypeScore=168.4402;InbreedingCoeff=0.8089;MQ=66.64;MQ0=2;MQRankSum=-0.729;QD=17.81;ReadPosRankSum=-0.767;VQSLOD=3.4737;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:26:30.53:398,31,0	0/0:13,0:13:24.06:0,24,316	0/0:37,0:30:24.07:0,24,311	0/0:23,0:20:27.09:0,27,357	0/0:16,0:18:33.11:0,33,458	0/0:23,1:25:0.51:0,1,693	0/0:28,0:28:45.15:0,45,625	0/0:29,0:29:30.10:0,30,417	0/0:28,0:28:54.17:0,54,733	1/1:17,16:33:42.61:813,43,0	1/1:10,10:20:30.10:590,30,0	0/0:28,0:28:45.15:0,45,623	0/0:31,0:31:42.14:0,42,582	0/0:31,0:31:69.22:0,69,942	0/0:46,0:46:96.29:0,96,1298	0/0:28,0:28:69.20:0,69,921	0/0:27,0:27:48.16:0,48,666	0/0:16,0:16:30.06:0,30,395	0/0:13,0:13:18.02:0,18,228	0/0:18,0:18:30.10:0,30,417	0/0:43,0:44:84.25:0,84,1144	0/0:24,0:24:42.14:0,42,582	0/0:24,0:26:29.21:0,29,373	0/0:22,0:22:23.03:0,23,327	1/1:7,13:21:36.12:716,36,0	0/1:33,2:35:50.18:50,0,774	0/0:26,0:26:63.21:0,63,872	0/0:22,0:22:36.10:0,36,481
chr10	74083333	.	AGCG	A	669.86	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=8.622;DP=249;FS=0.934;HRun=0;HaplotypeScore=50.8955;InbreedingCoeff=0.8848;MQ=87.34;MQ0=1;MQRankSum=-6.646;QD=18.61;ReadPosRankSum=0.893;VQSLOD=3.0673;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,6:7:21.01:223,21,0	0/0:5,0:5:15.05:0,15,370	0/0:7,0:7:11.98:0,12,415	0/0:13,0:13:31.97:0,32,782	0/0:7,0:7:18.06:0,18,438	0/0:8,0:8:24.08:0,24,591	0/0:12,0:12:36.12:0,36,886	0/0:14,0:14:39.13:0,39,907	0/0:9,0:9:27.08:0,27,616	0/0:7,0:7:21.07:0,21,518	0/0:6,0:6:15.05:0,15,364	1/1:1,9:10:21.60:246,22,0	1/1:0,6:6:12.66:171,13,0	0/0:5,0:5:12.04:0,12,290	0/0:8,0:8:24.08:0,24,578	0/0:7,0:7:21.07:0,21,517	0/0:23,0:23:69.24:0,69,1697	1/1:2,4:6:5.57:71,6,0	0/0:12,0:12:36.12:0,36,878	0/0:4,0:4:12.04:0,12,296	0/0:35,0:34:99:0,99,2321	1/1:0,2:2:3.01:35,3,0	1/1:1,4:5:9.01:91,9,0	./.	0/0:7,0:7:21.07:0,21,518	0/0:9,0:9:27.09:0,27,666	0/0:6,0:6:18.05:0,18,379	0/0:6,0:6:18.06:0,18,433
chr10	74083340	.	ACAG	A	703.86	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=8.126;DP=236;FS=2.014;HRun=0;HaplotypeScore=47.9718;InbreedingCoeff=0.8681;MQ=89.00;MQ0=1;MQRankSum=-7.469;QD=22.71;ReadPosRankSum=2.525;VQSLOD=3.0341;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:6:18.05:221,18,0	0/0:5,0:5:15.05:0,15,370	0/0:7,0:7:21.05:0,21,445	0/0:14,0:14:27.90:0,28,802	0/0:6,0:6:18.06:0,18,425	0/0:8,0:8:24.08:0,24,592	0/0:10,0:10:30.10:0,30,721	0/0:15,0:15:39.13:0,39,944	0/0:9,0:9:27.09:0,27,648	0/0:8,0:8:24.08:0,24,537	0/0:6,0:6:15.05:0,15,370	1/1:0,9:9:22.27:269,22,0	1/1:0,6:6:15.05:190,15,0	0/0:3,0:3:9.01:0,9,172	0/0:7,0:7:21.07:0,21,499	0/0:7,0:7:21.07:0,21,518	0/0:23,0:23:69.24:0,69,1701	1/1:0,4:4:6.02:77,6,0	0/0:12,0:12:33.11:0,33,795	0/0:4,0:4:12.04:0,12,296	0/0:32,0:31:87.30:0,87,2070	1/1:0,2:2:3.01:38,3,0	1/1:0,4:4:6.02:74,6,0	./.	0/0:7,0:7:21.07:0,21,490	0/0:9,0:9:27.09:0,27,648	0/0:4,0:4:9.03:0,9,222	0/0:6,0:6:18.06:0,18,443
chr10	74083558	.	TACACACAC	T	580.88	PASS	AB=0.909;AC=9;AF=0.167;AN=54;BaseQRankSum=1.577;DP=519;FS=4.835;HRun=0;HaplotypeScore=127.1396;InbreedingCoeff=0.5759;MQ=62.96;MQ0=15;MQRankSum=-2.708;QD=6.25;ReadPosRankSum=-0.985;VQSLOD=1.7151;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:21.07:0,21,565	0/0:5,0:5:3.01:0,3,122	./.	0/0:27,0:16:0:0,0,0	0/0:12,0:12:12.04:0,12,337	0/0:13,0:12:24.08:0,24,850	0/0:34,0:34:18.06:0,18,547	0/0:26,0:26:6.02:0,6,121	0/0:22,0:22:33.10:0,33,1078	0/0:15,0:15:14.20:0,14,139	0/0:5,0:5:3.01:0,3,69	1/1:13,8:21:12.01:210,12,0	1/1:6,2:8:2.90:74,3,0	0/0:17,0:17:17.93:0,18,459	0/0:16,0:16:24.07:0,24,773	0/0:12,0:12:18.06:0,18,473	0/0:24,0:34:30.07:0,30,768	0/0:25,0:30:36.08:0,36,651	0/0:18,0:17:12.51:0,13,384	0/0:4,0:4:3.01:0,3,94	0/0:54,0:53:69.20:0,69,1784	1/1:8,1:9:3.01:32,3,0	0/1:9,1:10:17.88:20,0,18	1/1:43,2:43:17.37:383,17,0	0/0:9,0:10:15.01:0,15,185	0/0:14,0:14:20.74:0,21,470	0/0:8,0:8:12.04:0,12,334	0/0:5,0:5:9.03:0,9,315
chr10	74084068	.	A	AG	1728.45	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-8.687;DP=466;FS=1.849;HRun=8;HaplotypeScore=48.9680;InbreedingCoeff=0.9416;MQ=75.78;MQ0=0;MQRankSum=-0.234;QD=23.05;ReadPosRankSum=0.944;VQSLOD=4.1289;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:77.04:0,77,685	0/0:6,0:6:18.01:0,18,164	0/0:20,0:19:38.33:0,38,326	0/0:11,0:11:23.82:0,24,208	0/0:8,0:8:24.01:0,24,219	0/0:15,0:14:39.02:0,39,357	0/0:21,0:21:48.01:0,48,439	0/0:21,0:21:32.94:0,33,294	0/0:6,0:6:18.01:0,18,164	0/0:18,0:18:38.69:0,39,356	0/0:6,0:6:12.01:0,12,110	1/1:3,14:17:14.68:423,15,0	1/1:3,15:18:36.11:415,36,0	0/0:21,0:21:54.02:0,54,493	0/0:18,0:18:51.03:0,51,466	0/0:12,1:13:4.41:0,4,295	0/0:26,0:26:69.02:0,69,631	0/0:20,0:20:42:0,42,383	0/0:19,0:19:48.02:0,48,437	0/0:8,0:8:18.01:0,18,164	0/0:42,0:42:99:0,108,984	1/1:3,6:9:18.05:208,18,0	1/1:1,7:8:12.03:138,12,0	1/1:3,20:23:63.18:715,63,0	0/0:12,0:12:33.01:0,33,301	0/0:14,0:14:32.99:0,33,294	0/0:17,0:17:42.01:0,42,383	0/0:15,0:15:39.87:0,40,348
chr10	74085481	.	CT	C	1622.12	PASS	AB=0.875;AC=13;AF=0.232;AN=56;BaseQRankSum=9.114;DP=398;FS=0.000;HRun=11;HaplotypeScore=43.9904;InbreedingCoeff=0.7019;MQ=72.50;MQ0=0;MQRankSum=-0.078;QD=16.22;ReadPosRankSum=1.205;VQSLOD=4.0274;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:85.03:0,85,871	0/0:7,0:7:21.05:0,21,224	0/1:7,0:8:3.96:4,0,37	0/1:6,1:7:9.04:25,0,9	0/0:15,0:15:45.07:0,45,467	0/0:20,0:22:56.83:0,57,564	0/0:19,1:20:20.46:0,20,416	0/0:17,1:19:20.28:0,20,386	0/0:9,0:9:24.06:0,24,256	0/0:16,0:16:45.11:0,45,480	0/0:7,0:7:12.03:0,12,128	1/1:3,15:18:41.92:345,42,0	1/1:1,15:17:46.99:375,47,0	0/0:13,0:13:36.08:0,36,376	0/0:9,0:9:18.05:0,18,192	0/0:10,0:10:27.06:0,27,281	0/0:19,0:19:26.60:0,27,479	0/0:21,1:22:38.49:0,38,604	0/0:13,1:14:17.44:0,17,378	0/1:2,1:3:15.63:16,0,48	0/0:20,0:20:48.10:0,48,498	1/1:1,9:10:20.95:172,21,0	1/1:0,14:14:41.95:345,42,0	1/1:2,20:23:64.94:520,65,0	0/0:15,1:17:17.29:0,17,361	0/0:13,0:13:36.09:0,36,384	0/0:10,1:12:11.26:0,11,305	0/0:3,0:3:0:0,0,0
chr10	74087201	.	A	AGCAAGTGCTAGGGAGTTCCTT	46685.14	PASS	AB=0.708;AC=54;AF=0.964;AN=56;BaseQRankSum=-4.296;DP=368;FS=2.916;HRun=0;HaplotypeScore=461.3876;InbreedingCoeff=-0.0447;MQ=57.82;MQ0=0;MQRankSum=-0.814;QD=126.86;ReadPosRankSum=1.742;VQSLOD=3.6247;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:24.15:1952,24,0	1/1:5,0:5:12.04:839,12,0	0/1:4,1:8:14.07:808,0,14	0/1:4,0:6:6.29:546,0,6	1/1:15,0:15:36.12:2082,36,0	1/1:22,0:22:46.35:3022,46,0	1/1:17,0:16:45.13:2537,45,0	1/1:12,0:12:36.11:2107,36,0	1/1:14,0:14:24.51:2168,25,0	1/1:15,0:15:36.23:1771,36,0	1/1:7,0:7:4.06:642,4,0	1/1:13,0:13:23.69:1498,24,0	1/1:17,0:17:46.12:2856,46,0	1/1:14,0:14:12.24:1736,12,0	1/1:18,0:18:24.94:1761,25,0	1/1:24,0:23:56.76:3191,57,0	1/1:10,0:9:22.01:1305,22,0	1/1:7,0:7:18.06:1061,18,0	1/1:10,0:10:22.53:1165,23,0	1/1:8,0:8:15.05:1078,15,0	1/1:10,0:10:24.08:946,24,0	1/1:17,0:17:47.48:2543,47,0	1/1:10,0:10:21.07:1531,21,0	1/1:5,0:4:8.99:208,9,0	1/1:17,0:17:38.24:1818,38,0	1/1:27,0:27:55.42:3409,55,0	1/1:14,0:14:33.67:1591,34,0	1/1:7,0:7:15.52:514,16,0
chr10	74087256	.	C	CT	58.59	PASS	AB=0.829;AC=7;AF=0.130;AN=54;BaseQRankSum=5.793;DP=316;FS=47.769;HRun=0;HaplotypeScore=83.3286;InbreedingCoeff=0.2576;MQ=34.78;MQ0=9;MQRankSum=-5.017;QD=0.99;ReadPosRankSum=2.430;VQSLOD=-0.5053;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,11:15:14.21:131,14,0	0/0:1,1:2:0.89:0,1,2	0/0:6,0:1:3.01:0,3,38	./.	0/0:5,1:5:5.99:0,6,49	0/0:14,0:15:6.48:0,6,68	0/0:8,4:12:8.88:0,9,58	0/0:7,5:11:7.61:0,8,112	0/1:6,1:6:0:0,0,0	0/0:4,2:6:6.25:0,6,62	0/0:9,0:9:5.47:0,5,66	0/0:7,2:9:3.96:0,4,26	0/1:8,0:7:0:0,0,0	0/1:12,3:13:2.09:9,0,2	0/0:13,3:16:8.48:0,8,58	0/0:21,5:26:9.42:0,9,175	0/0:14,0:13:15.01:0,15,186	0/0:10,1:11:11.30:0,11,188	0/0:8,0:8:16.59:0,17,119	0/0:10,3:13:8.99:0,9,104	0/0:27,0:25:11.84:0,12,125	0/0:10,3:10:8:0,8,75	0/0:7,3:10:6.36:0,6,35	0/0:8,3:10:6.01:0,6,64	0/0:6,2:8:5.19:0,5,32	0/0:12,4:16:11.86:0,12,342	0/1:6,5:10:8.92:9,0,107	0/1:2,1:3:16.91:19,0,17
chr10	74087311	.	CCACACACACACACACACACA	C	949.25	PASS	AC=8;AF=0.160;AN=50;BaseQRankSum=3.804;DP=566;FS=1.367;HRun=0;HaplotypeScore=190.9143;InbreedingCoeff=0.6520;MQ=38.71;MQ0=48;MQRankSum=-4.481;QD=18.61;ReadPosRankSum=-2.175;VQSLOD=2.5968;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:33.58:0,34,2525	./.	./.	./.	0/0:15,0:17:23.98:0,24,1846	0/0:19,0:17:30.10:0,30,2286	0/0:15,0:14:18.06:0,18,1079	0/0:16,0:16:12.04:0,12,500	0/0:17,0:17:19.31:0,19,1100	0/0:13,0:11:18.02:0,18,623	0/0:11,0:11:6.02:0,6,440	1/1:3,2:5:3.01:113,3,0	1/1:9,9:16:0.79:268,1,0	0/0:12,0:12:9.03:0,9,531	0/0:22,0:25:36.54:0,37,2429	0/0:29,0:33:41.32:0,41,2438	0/0:16,0:26:45.15:0,45,2968	0/0:10,0:10:18.06:0,18,812	0/0:12,0:9:15.05:0,15,688	0/0:12,0:12:5.99:0,6,483	0/0:38,0:34:60.68:0,61,4036	1/1:8,8:14:2.66:132,3,0	1/1:9,3:12:15.05:558,15,0	0/0:14,4:15:0.61:0,1,1	0/0:13,0:14:18.06:0,18,1287	0/0:20,0:21:31.81:0,32,1037	0/0:12,0:10:15.52:0,16,779	0/0:3,0:3:2.87:0,3,262
chr10	74087330	.	CA	C	344.69	PASS	AB=0.880;AC=7;AF=0.125;AN=56;BaseQRankSum=5.661;DP=583;FS=2.163;HRun=1;HaplotypeScore=107.3059;InbreedingCoeff=0.3227;MQ=40.13;MQ0=44;MQRankSum=-4.224;QD=5.07;ReadPosRankSum=-1.415;VQSLOD=0.0269;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:34:48.09:0,48,657	0/0:6,0:6:9.03:0,9,114	0/0:33,0:4:12.03:0,12,142	0/0:42,0:4:6.01:0,6,65	0/0:25,0:24:53.48:0,53,679	0/0:28,0:26:37.03:0,37,564	0/0:18,0:18:27.09:0,27,382	0/0:15,0:15:39.04:0,39,455	0/0:20,0:19:22.27:0,22,302	0/0:11,0:9:24.08:0,24,318	0/0:13,0:13:14.35:0,14,209	1/1:5,0:5:5.38:42,5,0	1/1:15,0:13:0.64:38,1,0	0/0:19,0:16:17.89:0,18,227	0/0:29,0:28:35.40:0,35,493	0/0:29,0:28:42.04:0,42,543	0/0:32,0:31:69.16:0,69,833	0/0:12,0:12:30.02:0,30,348	0/0:12,0:10:30.10:0,30,407	0/0:17,0:17:24.02:0,24,299	0/0:54,0:48:85.18:0,85,1149	0/1:13,0:12:32.09:34,0,32	0/1:7,6:13:8.02:321,0,8	0/1:21,1:18:31.35:31,0,68	0/0:19,0:19:30.30:0,30,405	0/0:26,0:24:68.52:0,69,818	0/0:14,0:12:30.57:0,31,389	0/0:4,0:4:5.88:0,6,67
chr10	74087503	.	AG	A	552.77	PASS	AB=0.923;AC=12;AF=0.214;AN=56;BaseQRankSum=1.103;DP=479;FS=8.864;HRun=11;HaplotypeScore=76.6886;InbreedingCoeff=-0.0408;MQ=74.93;MQ0=0;MQRankSum=-1.371;QD=3.18;ReadPosRankSum=1.103;VQSLOD=-0.3390;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,30:38:75.16:588,75,0	0/0:5,0:5:6.02:0,6,64	0/0:20,1:19:18.10:0,18,233	0/1:13,2:15:22.77:23,0,133	0/0:15,1:17:17.73:0,18,165	0/0:24,0:24:30.59:0,31,407	0/0:18,1:19:5.21:0,5,234	0/1:14,1:15:15.64:16,0,46	0/0:16,0:16:17.99:0,18,178	0/0:18,0:18:26.60:0,27,198	0/0:16,0:16:3.93:0,4,126	0/0:12,0:12:20.15:0,20,104	0/0:23,0:25:40.17:0,40,214	0/0:16,0:16:21.03:0,21,215	0/1:12,1:14:1.27:1,0,144	0/1:15,1:16:1.38:1,0,172	0/0:21,0:21:45.06:0,45,449	0/0:21,0:21:37.50:0,37,203	0/1:12,1:13:12.65:13,0,65	0/0:15,1:16:3.01:0,3,32	0/1:15,1:16:3.72:4,0,153	0/0:20,0:20:23.14:0,23,130	0/0:10,0:10:5.87:0,6,40	0/0:28,0:28:46.18:0,46,256	0/1:12,1:13:14.86:15,0,87	0/1:10,1:11:12.62:13,0,62	0/1:15,1:15:0.69:1,0,174	0/1:6,1:7:15.67:16,0,41
chr10	74087514	.	G	GA	2718.93	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=3.719;DP=391;FS=1.948;HRun=1;HaplotypeScore=66.3189;InbreedingCoeff=0.7169;MQ=77.76;MQ0=0;MQRankSum=-3.307;QD=16.28;ReadPosRankSum=0.786;VQSLOD=3.8012;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:87.06:497,87,0	0/0:3,0:3:8.98:0,9,95	0/0:17,0:15:35.64:0,36,357	0/0:16,0:16:31.95:0,32,323	0/0:10,0:10:20.85:0,21,215	0/0:20,0:20:56.97:0,57,630	0/0:24,0:24:62.86:0,63,607	0/0:20,0:20:53.89:0,54,476	0/0:9,0:9:24.03:0,24,272	0/1:14,0:14:36.33:72,0,36	0/1:13,0:13:24.09:64,0,24	1/1:1,7:8:21.07:274,21,0	1/1:9,12:22:43.61:517,44,0	0/0:9,0:9:27.02:0,27,304	0/0:11,0:11:14.75:0,15,247	0/0:13,0:14:29.99:0,30,331	0/0:17,0:17:51.07:0,51,580	1/1:15,5:20:45.16:497,45,0	0/0:8,0:8:23.90:0,24,222	0/0:7,0:7:8.96:0,9,82	0/0:11,0:11:29.97:0,30,318	1/1:6,7:13:28.58:328,29,0	1/1:3,1:4:8.98:87,9,0	1/1:15,10:25:50.84:561,51,0	0/1:11,0:11:10.99:21,0,11	0/0:12,0:12:21.33:0,21,186	0/0:12,0:12:35.87:0,36,354	0/0:4,0:4:11.90:0,12,109
chr10	74087557	.	CA	C	1230.30	PASS	AB=0.727;AC=17;AF=0.304;AN=56;BaseQRankSum=3.259;DP=427;FS=41.626;HRun=11;HaplotypeScore=69.9985;InbreedingCoeff=0.7172;MQ=65.13;MQ0=8;MQRankSum=1.408;QD=8.31;ReadPosRankSum=4.365;VQSLOD=-0.4626;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:26:5.20:31,0,5	0/0:4,0:4:9.01:0,9,88	0/0:15,0:8:11.76:0,12,88	0/0:16,0:7:9.01:0,9,87	0/0:10,0:10:24.91:0,25,245	0/0:21,1:21:10.53:0,11,256	0/0:20,0:20:47.94:0,48,487	0/0:28,0:28:44.87:0,45,421	0/0:16,0:15:27.04:0,27,267	1/1:2,10:13:28.99:227,29,0	0/1:1,7:9:23.29:81,0,23	1/1:8,8:16:19.46:190,19,0	1/1:11,10:21:33.57:271,34,0	0/0:15,0:16:30.63:0,31,246	0/0:15,2:17:11.83:0,12,301	0/0:22,0:23:56.52:0,57,507	0/0:13,0:14:28.23:0,28,256	0/0:11,0:24:46:0,46,262	0/0:7,0:7:18.52:0,19,192	0/1:9,1:10:0.59:1,0,195	0/0:11,0:11:29.44:0,29,296	1/1:4,9:14:16.86:127,17,0	1/1:3,7:9:20.97:172,21,0	1/1:10,9:19:26.81:200,27,0	1/1:1,9:10:14.96:123,15,0	0/0:13,0:13:2.79:0,3,221	0/0:21,0:21:38.48:0,38,370	0/0:1,0:1:0:0,0,0
chr10	74087887	.	T	TTCC	2688.07	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-0.453;DP=546;FS=0.000;HRun=0;HaplotypeScore=94.5092;InbreedingCoeff=0.9706;MQ=74.90;MQ0=0;MQRankSum=-1.610;QD=28.30;ReadPosRankSum=3.422;VQSLOD=3.8677;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:38:85.99:0,86,483	0/0:6,0:6:18.03:0,18,268	0/0:14,0:14:33.55:0,34,510	0/0:15,0:14:36.10:0,36,636	0/0:14,0:15:38.97:0,39,515	0/0:19,0:19:57.03:0,57,923	0/0:23,0:24:66.17:0,66,1077	0/0:24,0:24:72.08:0,72,1101	0/0:17,0:17:51.16:0,51,903	0/0:17,0:17:51.15:0,51,843	0/0:15,0:15:36.10:0,36,621	1/1:1,24:28:45.15:1071,45,0	1/1:3,10:15:18.06:434,18,0	0/0:13,0:14:42.10:0,42,627	0/0:23,0:23:69.14:0,69,1078	0/0:35,0:35:96.29:0,96,1702	0/0:28,0:28:81.19:0,81,1339	1/1:2,0:20:41.92:483,42,0	0/0:15,0:15:45.14:0,45,763	0/0:14,0:15:39.07:0,39,619	0/0:48,0:48:99:0,135,2328	1/1:4,5:10:21.07:463,21,0	1/1:0,5:6:6.01:91,6,0	1/1:3,10:16:15.03:328,15,0	0/0:13,0:13:30.07:0,30,516	0/0:18,0:18:54.14:0,54,872	0/0:28,0:27:78.05:0,78,1204	0/0:10,0:10:30.09:0,30,522
chr10	74093587	.	AT	A	566.30	PASS	AB=0.857;AC=3;AF=0.054;AN=56;BaseQRankSum=6.029;DP=418;FS=5.305;HRun=9;HaplotypeScore=39.1544;InbreedingCoeff=0.6545;MQ=73.24;MQ0=0;MQRankSum=-1.348;QD=16.18;ReadPosRankSum=0.485;VQSLOD=3.1838;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.22:0,87,973	0/0:12,0:12:33.07:0,33,367	0/0:10,0:9:20.80:0,21,187	0/1:5,0:6:10.16:10,0,87	0/0:24,0:25:72.03:0,72,801	0/0:11,0:11:33.10:0,33,381	0/0:13,0:13:39.12:0,39,450	0/0:25,0:25:69.19:0,69,781	0/0:11,0:12:32.93:0,33,361	0/0:14,0:14:42.12:0,42,485	0/0:6,0:6:18.05:0,18,207	0/0:9,0:10:29.91:0,30,316	0/0:12,0:12:36.11:0,36,415	0/0:14,0:14:39.10:0,39,439	0/0:14,0:14:36.09:0,36,403	0/0:11,0:11:33.08:0,33,369	0/0:22,0:22:63.19:0,63,727	1/1:3,26:29:72.04:659,72,0	0/0:14,0:14:42.12:0,42,485	0/0:11,0:11:30.09:0,30,346	0/0:10,0:10:30.08:0,30,337	0/0:14,0:14:42.08:0,42,455	0/0:15,0:15:39.12:0,39,450	0/0:11,0:10:33.09:0,33,372	0/0:21,0:21:57.16:0,57,648	0/0:18,0:18:54.16:0,54,623	0/0:22,0:22:66.18:0,66,752	0/0:6,0:6:15.04:0,15,173
chr10	74094261	.	CTCTCTCT	C	1765.24	PASS	AB=0.816;AC=10;AF=0.185;AN=54;BaseQRankSum=8.774;DP=499;FS=36.631;HRun=0;HaplotypeScore=128.3508;InbreedingCoeff=0.1672;MQ=62.66;MQ0=7;MQRankSum=-1.739;QD=16.19;ReadPosRankSum=3.080;VQSLOD=1.5489;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,10:27:57.39:373,0,57	0/0:6,0:6:18.05:0,18,500	0/0:47,0:28:75.26:0,75,2719	0/0:27,0:19:57.20:0,57,1911	0/0:11,0:10:21.54:0,22,689	0/0:18,0:18:48.08:0,48,1760	0/0:32,0:32:93.31:0,93,3177	0/0:24,0:23:69.23:0,69,2233	0/0:18,0:18:45.15:0,45,1569	0/1:5,4:9:5.36:413,0,5	./.	0/1:8,1:9:35:175,0,35	0/1:10,2:12:99:339,0,105	0/0:14,0:14:26.36:0,26,846	0/0:17,0:16:48.16:0,48,1606	0/0:17,0:17:42.09:0,42,1449	0/0:25,0:25:45.15:0,45,1618	0/1:19,3:20:76.65:342,0,77	0/0:21,0:21:63.22:0,63,2183	0/0:7,0:7:15.05:0,15,513	0/0:35,0:35:87.30:0,87,3034	1/1:4,1:5:2.95:34,3,0	0/1:9,2:11:36.11:120,0,36	0/0:12,1:13:6.47:0,6,85	1/1:3,8:11:3.08:108,3,0	0/0:22,0:22:66.23:0,66,2196	0/0:19,0:19:55.07:0,55,1907	0/0:10,0:10:30.10:0,30,1141
chr10	74095033	.	T	TGTGTG	4405.50	PASS	AB=0.977;AC=21;AF=0.375;AN=56;BaseQRankSum=-0.780;DP=776;FS=16.858;HRun=0;HaplotypeScore=162.1032;InbreedingCoeff=0.6594;MQ=69.40;MQ0=16;MQRankSum=-3.737;QD=11.04;ReadPosRankSum=-0.564;VQSLOD=3.2947;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:31:3.44:46,3,0	0/0:6,0:6:15.05:0,15,281	0/1:77,0:39:13.80:14,0,296	0/1:80,0:39:13.55:14,0,387	0/0:16,0:16:30.10:0,30,561	0/0:23,0:23:45.15:0,45,805	0/0:33,0:33:75.21:0,75,1330	0/0:14,0:14:18.02:0,18,264	0/0:15,0:15:39.13:0,39,717	1/1:16,7:23:18.06:493,18,0	1/1:4,7:12:5.95:55,6,0	1/1:17,14:30:35.92:875,36,0	1/1:4,16:20:30.41:729,30,0	0/0:37,0:37:87.25:0,87,1533	0/0:23,0:23:42.14:0,42,774	0/0:15,0:15:36.11:0,36,642	0/0:43,0:43:91.19:0,91,1666	1/1:13,24:39:39.13:1077,39,0	0/0:16,0:16:18.04:0,18,305	0/0:5,0:5:9.03:0,9,168	0/0:104,0:103:99:0,203,3516	1/1:8,5:13:2.93:18,3,0	0/0:6,5:11:0:0,0,0	1/1:11,30:42:32.94:772,33,0	1/1:4,6:10:10.28:261,10,0	0/1:16,1:17:52.89:53,0,498	0/0:13,0:13:27.09:0,27,505	0/0:3,0:3:9.03:0,9,150
chr10	74095085	.	TGTGC	T	1643.81	PASS	AB=1.000;AC=24;AF=0.462;AN=52;BaseQRankSum=4.700;DP=568;FS=1.099;HRun=0;HaplotypeScore=119.3701;InbreedingCoeff=0.7891;MQ=47.68;MQ0=29;MQRankSum=-1.981;QD=6.76;ReadPosRankSum=1.988;VQSLOD=2.6941;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:25:8.80:73,9,0	0/0:13,0:13:23.59:0,24,183	./.	./.	0/0:10,0:10:13.01:0,13,81	0/0:17,0:15:32.82:0,33,272	0/0:38,0:36:45.03:0,45,430	0/0:16,0:16:13.08:0,13,133	0/0:20,0:19:31.64:0,32,383	1/1:12,0:12:10.55:129,11,0	1/1:8,0:8:5.91:50,6,0	1/1:23,0:21:19.49:131,19,0	1/1:12,0:12:17.22:119,17,0	0/0:29,0:29:29.75:0,30,287	1/1:12,1:13:20.90:219,21,0	1/1:10,0:10:17.96:148,18,0	1/1:41,3:43:64.90:736,65,0	1/1:20,0:18:9.46:84,9,0	0/0:16,0:14:16.74:0,17,113	0/0:5,0:5:8.97:0,9,86	0/0:99,0:94:32.03:0,32,726	0/1:9,0:9:0:0,0,0	0/1:7,0:7:0:0,0,0	1/1:44,0:41:0.49:21,0,0	1/1:14,0:13:14.97:123,15,0	0/0:21,0:18:0.09:0,0,91	0/0:8,0:8:11.87:0,12,94	0/0:6,0:2:5.99:0,6,49
chr10	74095091	.	TGC	T	123.71	PASS	AB=0.940;AC=7;AF=0.125;AN=56;BaseQRankSum=6.569;DP=539;FS=16.642;HRun=0;HaplotypeScore=109.0966;InbreedingCoeff=0.0913;MQ=47.11;MQ0=29;MQRankSum=0.127;QD=1.03;ReadPosRankSum=-1.253;VQSLOD=1.0333;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:8.84:0,9,56	0/0:13,0:13:26.87:0,27,454	0/0:5,0:1:3.01:0,3,43	0/0:7,0:3:3.01:0,3,30	0/0:10,0:10:27.08:0,27,420	0/0:17,0:15:36.12:0,36,670	0/0:31,0:29:63.49:0,63,1075	0/0:12,0:12:32.47:0,32,511	0/0:23,0:22:48:0,48,813	0/1:10,2:12:99:125,0,118	0/0:10,0:9:5.88:0,6,36	0/1:22,1:19:11.90:12,0,113	0/0:12,0:12:10.59:0,11,114	0/0:26,0:26:66.14:0,66,988	0/0:14,0:14:15.62:0,16,238	0/0:13,0:12:28.77:0,29,215	0/0:45,0:44:58.73:0,59,772	0/1:17,1:16:30.37:30,0,281	0/1:14,0:12:1.77:2,0,424	0/0:5,0:5:12.04:0,12,215	0/0:93,0:88:99:0,184,2929	0/0:9,0:9:0:0,0,0	1/1:8,0:8:3.01:30,3,0	0/1:42,3:41:41.78:42,0,96	0/0:14,0:13:17.73:0,18,134	0/0:17,0:14:13.31:0,13,460	0/0:9,0:9:21.03:0,21,363	0/0:6,0:2:6.02:0,6,115
chr10	74095093	.	CGTGCGTGCGTGCGT	C	1471.89	PASS	AB=1.000;AC=14;AF=0.269;AN=52;BaseQRankSum=5.798;DP=547;FS=1.289;HRun=0;HaplotypeScore=188.5717;InbreedingCoeff=0.5307;MQ=46.69;MQ0=31;MQRankSum=-3.886;QD=9.38;ReadPosRankSum=-0.834;VQSLOD=2.7092;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:9.02:0,9,126	0/0:12,0:12:24.32:0,24,786	./.	./.	0/0:11,0:11:27.04:0,27,406	0/0:17,0:15:36.11:0,36,973	0/0:33,0:31:64.01:0,64,1653	0/0:11,0:11:32.84:0,33,496	0/0:23,0:21:41.87:0,42,1664	0/1:12,0:13:7.14:244,0,7	1/1:9,0:9:5.85:43,6,0	0/1:24,0:20:1.99:248,0,2	1/1:13,1:13:23.74:522,24,0	0/0:26,0:26:48.50:0,49,1097	0/0:14,0:14:27.65:0,28,532	0/0:13,0:12:25.66:0,26,458	0/0:45,0:44:99:0,109,1744	0/1:19,0:17:31.16:31,0,459	0/0:16,0:14:38.07:0,38,603	0/0:5,0:5:12.51:0,13,392	0/0:91,0:86:99:0,167,3888	1/1:9,1:10:3.46:25,3,0	1/1:9,0:9:6.02:162,6,0	1/1:41,2:40:12.05:280,12,0	0/1:14,0:12:27.05:81,0,27	0/0:17,0:14:4.01:0,4,629	0/0:10,0:9:20.82:0,21,395	0/0:6,0:2:6.02:0,6,268
chr10	74095095	.	TGC	T	481.57	PASS	AB=0.974;AC=12;AF=0.231;AN=52;BaseQRankSum=9.333;DP=535;FS=10.171;HRun=0;HaplotypeScore=109.4264;InbreedingCoeff=0.6084;MQ=46.48;MQ0=30;MQRankSum=-1.358;QD=3.73;ReadPosRankSum=-0.427;VQSLOD=1.7555;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:8.84:0,9,56	0/0:12,0:12:23.88:0,24,441	./.	./.	0/0:11,0:11:27.09:0,27,435	0/0:18,0:16:36.11:0,36,653	0/0:33,0:31:63.51:0,64,1085	0/0:11,0:11:33.10:0,33,539	0/0:22,0:21:41.98:0,42,732	0/1:13,0:13:93.58:121,0,94	0/0:9,1:9:5.87:0,6,35	1/1:21,1:20:15.69:126,16,0	1/1:14,0:13:25.90:160,26,0	0/0:23,0:23:48.06:0,48,741	0/0:14,0:14:23.05:0,23,268	0/0:13,0:12:28.94:0,29,276	0/0:44,0:43:71.50:0,72,722	0/1:17,1:16:45.74:46,0,139	0/0:18,0:16:30.85:0,31,507	0/0:6,0:6:12.04:0,12,215	0/0:90,0:85:99:0,137,2668	1/1:10,0:10:1.21:3,1,0	1/1:9,0:9:6.01:62,6,0	1/1:38,3:37:11.56:119,12,0	0/0:14,0:12:17.65:0,18,128	0/0:16,0:13:2.83:0,3,443	0/0:9,1:9:21.03:0,21,371	0/0:6,0:2:6.02:0,6,115
chr10	74095103	.	TGC	T	1686.40	PASS	AB=0.997;AC=25;AF=0.481;AN=52;BaseQRankSum=7.125;DP=513;FS=0.951;HRun=0;HaplotypeScore=102.0236;InbreedingCoeff=0.2073;MQ=45.53;MQ0=29;MQRankSum=-0.180;QD=4.53;ReadPosRankSum=1.525;VQSLOD=2.4954;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:8.98:73,9,0	0/0:12,0:12:6.46:0,6,167	./.	./.	0/0:9,0:9:10.53:0,11,106	0/0:18,0:16:34.07:0,34,271	0/0:35,0:33:46.17:0,46,581	0/0:11,0:11:19:0,19,182	0/0:19,0:18:35.61:0,36,352	0/1:11,0:11:44.23:91,0,44	1/1:8,0:7:5.91:50,6,0	1/1:22,4:22:24.98:232,25,0	1/1:15,0:14:25.69:156,26,0	0/0:18,0:18:32.68:0,33,306	0/1:13,0:13:46.95:85,0,47	0/1:12,0:11:79.08:96,0,79	1/1:42,0:41:0.37:519,0,0	1/1:18,0:16:8.31:209,8,0	0/1:19,0:17:18.47:18,0,64	0/0:8,0:8:3.50:0,3,53	0/1:82,2:79:86.23:86,0,598	0/1:13,0:13:3.16:18,0,3	1/1:10,0:10:5.62:27,6,0	1/1:37,1:34:13.17:81,13,0	0/1:16,0:14:24.24:102,0,24	0/1:16,0:14:12.52:13,0,121	0/0:8,0:7:5.52:0,6,85	0/1:6,0:2:3.38:3,0,18
chr10	74095105	.	CGT	C	926.77	PASS	AB=0.954;AC=26;AF=0.500;AN=52;BaseQRankSum=3.440;DP=527;FS=2.446;HRun=0;HaplotypeScore=108.4850;InbreedingCoeff=-0.0283;MQ=45.59;MQ0=29;MQRankSum=1.243;QD=2.19;ReadPosRankSum=2.676;VQSLOD=2.0165;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:0:0,0,0	0/1:12,1:13:36.55:39,0,37	./.	./.	0/1:7,1:8:26.80:27,0,36	0/1:19,0:17:26.70:27,0,39	0/1:34,3:35:26.08:26,0,397	0/0:11,0:11:6.02:0,6,77	0/0:19,1:19:8.67:0,9,132	0/0:11,0:11:9.78:0,10,70	0/0:9,0:8:2.37:0,2,8	0/1:26,0:23:28.34:28,0,30	1/1:15,1:15:13.98:121,14,0	0/0:20,0:20:15.01:0,15,181	0/1:12,1:13:19.72:20,0,101	0/0:10,2:11:12.01:0,12,148	0/1:43,0:42:22.78:23,0,151	0/1:20,0:18:28.41:28,0,109	0/1:14,4:16:15.99:57,0,16	1/1:7,0:7:2.90:33,3,0	1/1:76,7:79:16.36:342,16,0	0/1:13,0:13:8.43:8,0,14	1/1:10,0:10:6.01:64,6,0	1/1:35,5:36:14.46:154,14,0	0/0:16,1:15:8.38:0,8,68	0/1:16,0:14:15.80:24,0,16	1/1:7,2:8:3.01:33,3,0	1/1:5,1:2:3.01:33,3,0
chr10	74095349	.	GCCTCT	G	9873.26	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=16.092;DP=581;FS=8.971;HRun=0;HaplotypeScore=111.9973;InbreedingCoeff=0.9846;MQ=79.27;MQ0=0;MQRankSum=-8.692;QD=48.40;ReadPosRankSum=5.632;VQSLOD=4.4612;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,44:49:99:2582,126,0	0/0:4,0:4:12.04:0,12,310	0/0:16,0:16:45.15:0,45,1215	0/0:15,0:15:42.10:0,42,1203	0/0:8,0:8:24.08:0,24,702	0/0:26,0:26:69.23:0,69,2004	0/0:26,0:25:72.25:0,72,2165	0/0:25,0:25:60.21:0,60,1769	0/0:22,0:22:60.21:0,60,1831	1/1:0,12:12:36.12:734,36,0	1/1:2,7:9:18.06:348,18,0	1/1:3,22:25:63.22:1292,63,0	1/1:3,11:14:30.10:615,30,0	0/0:26,0:26:69.24:0,69,2067	0/0:28,0:28:78.27:0,78,2326	0/0:13,0:13:36.12:0,36,1024	0/0:32,0:32:87.28:0,87,2587	1/1:3,23:26:57.19:1146,57,0	0/0:13,0:13:33.10:0,33,916	0/0:11,0:11:30.10:0,30,866	0/0:55,0:55:99:0,154,4644	1/1:1,9:10:24.08:475,24,0	1/1:0,12:12:27.09:528,27,0	1/1:2,25:27:60.21:1231,60,0	1/1:3,17:20:45.15:923,45,0	0/0:35,0:35:96.33:0,96,2880	0/0:19,0:19:57.20:0,57,1709	0/0:3,0:3:9.03:0,9,275
chr10	74095603	.	T	TG	1605.56	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-4.677;DP=455;FS=13.791;HRun=6;HaplotypeScore=46.9720;InbreedingCoeff=0.9346;MQ=80.33;MQ0=0;MQRankSum=-4.716;QD=24.33;ReadPosRankSum=0.731;VQSLOD=2.0401;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,21:27:54.17:678,54,0	0/0:4,0:4:12.03:0,12,122	0/0:10,0:10:25.84:0,26,240	0/0:12,0:12:27.01:0,27,257	0/0:9,0:9:27.05:0,27,268	0/0:17,0:17:48.11:0,48,489	0/0:29,0:29:81.14:0,81,815	0/0:12,0:12:36.07:0,36,362	0/0:14,0:14:42.10:0,42,428	1/1:3,15:18:45.14:558,45,0	1/1:1,11:12:27.09:340,27,0	0/0:21,0:21:63.14:0,63,643	0/0:10,0:10:24.05:0,24,244	0/0:21,0:21:45.09:0,45,459	0/0:10,0:10:30:0,30,287	0/0:4,0:4:6.01:0,6,61	0/0:30,0:30:69.08:0,69,691	0/0:28,0:28:69.15:0,69,703	0/0:11,0:11:27.06:0,27,275	0/0:3,0:3:9.02:0,9,92	0/0:59,0:59:99:0,162,1636	0/0:15,0:15:23.83:0,24,237	0/0:5,0:5:15.03:0,15,153	0/0:27,0:26:75.17:0,75,765	1/1:2,7:9:15.05:188,15,0	0/0:14,0:14:39.09:0,39,398	0/0:17,0:17:48.11:0,48,490	0/0:7,0:7:18.01:0,18,175
chr10	74099795	.	GCACACACA	G	2023.11	PASS	AB=0.971;AC=14;AF=0.259;AN=54;BaseQRankSum=1.503;DP=722;FS=0.663;HRun=0;HaplotypeScore=170.8360;InbreedingCoeff=0.6223;MQ=52.06;MQ0=15;MQRankSum=-1.689;QD=9.15;ReadPosRankSum=2.769;VQSLOD=2.4591;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:2.84:0,3,23	0/0:8,0:9:18.06:0,18,551	0/0:28,0:10:9.03:0,9,149	0/0:27,0:11:3.01:0,3,123	0/0:30,0:29:39.11:0,39,1163	0/0:16,0:16:21.54:0,22,694	0/0:25,0:23:28.04:0,28,865	0/0:35,0:36:57.15:0,57,1355	0/0:25,0:23:45.58:0,46,1226	1/1:19,7:27:32.65:943,33,0	1/1:15,8:23:21.04:411,21,0	0/1:31,0:33:15:44,0,15	1/1:24,0:25:5.47:58,5,0	0/0:19,0:19:30.10:0,30,1026	0/0:23,0:21:45.15:0,45,1524	0/0:23,0:24:15.81:0,16,1610	0/0:38,0:36:76.81:0,77,2261	1/1:10,0:17:1.79:211,2,0	0/0:25,0:24:63.12:0,63,1653	0/0:18,0:18:21.07:0,21,648	0/0:51,0:49:72.72:0,73,2098	0/1:30,0:30:28.44:28,0,31	./.	1/1:40,1:40:0.47:1,0,0	1/1:14,11:25:21.06:488,21,0	0/0:27,0:27:57.14:0,57,1705	0/0:14,0:15:36.01:0,36,855	0/0:10,0:10:18.03:0,18,394
chr10	74099812	.	CACACACAGAG	C	1435.78	PASS	AB=0.827;AC=14;AF=0.250;AN=56;BaseQRankSum=6.591;DP=680;FS=0.618;HRun=0;HaplotypeScore=171.3993;InbreedingCoeff=0.2814;MQ=49.39;MQ0=16;MQRankSum=-1.920;QD=5.40;ReadPosRankSum=1.816;VQSLOD=2.3332;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:31:0:0,0,0	0/0:9,0:9:21.07:0,21,651	0/0:12,0:2:5.91:0,6,68	0/0:8,0:1:3.01:0,3,96	0/0:34,0:33:39.13:0,39,1080	0/1:21,0:20:60.17:60,0,676	0/0:23,0:21:27.51:0,28,798	0/0:32,0:31:79.72:0,80,1252	0/0:32,0:30:67.97:0,68,1743	0/1:22,0:22:99:532,0,105	1/1:22,0:21:15.04:241,15,0	1/1:7,21:28:6.02:133,6,0	1/1:4,20:24:8.53:116,9,0	0/0:22,0:20:45.15:0,45,1214	0/0:26,0:25:63.18:0,63,1872	0/1:25,0:24:43.07:43,0,1792	0/0:41,0:39:96.60:0,97,2496	0/1:14,0:14:58.36:131,0,58	0/0:30,0:28:69.21:0,69,1829	0/0:10,0:10:26.92:0,27,813	0/0:43,0:41:79.56:0,80,1861	0/1:4,26:30:44.33:44,0,67	0/1:4,19:22:0:0,0,0	0/0:7,37:44:0.45:0,0,2	0/1:25,0:24:24.78:289,0,25	0/0:24,0:24:69.11:0,69,1794	0/0:14,0:14:39.11:0,39,856	0/0:10,0:10:22.60:0,23,468
chr10	74099818	.	CAG	C	138.92	PASS	AB=0.990;AC=10;AF=0.200;AN=50;BaseQRankSum=1.850;DP=649;FS=6.739;HRun=0;HaplotypeScore=123.4458;InbreedingCoeff=0.0801;MQ=49.65;MQ0=16;MQRankSum=-0.103;QD=0.68;ReadPosRankSum=0.296;VQSLOD=1.7853;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:0:0,0,0	0/0:9,0:10:0.85:0,1,125	./.	./.	0/0:33,0:32:14.39:0,14,140	0/1:19,0:18:45.81:46,0,116	0/0:20,3:21:11.61:0,12,137	0/0:29,0:28:17.66:0,18,111	0/0:29,0:27:23.92:0,24,419	0/0:23,0:23:1.28:0,1,181	./.	1/1:26,0:27:1.14:4,1,0	1/1:22,0:22:2:15,2,0	0/0:20,1:19:18:0,18,186	0/0:27,2:28:38.86:0,39,414	0/1:24,1:24:19.88:20,0,306	0/1:39,0:38:87.32:87,0,424	0/0:20,0:20:10.06:0,10,147	0/0:27,0:25:30.36:0,30,407	0/0:12,0:12:18:0,18,166	0/0:38,0:36:2.67:0,3,227	0/0:29,0:29:3.01:0,3,34	0/1:21,0:20:0:0,0,0	0/0:43,0:44:0.88:0,1,2	0/1:24,0:22:7.94:8,0,18	0/1:25,0:25:73.48:73,0,202	0/0:13,0:13:5.53:0,6,162	0/0:8,0:7:9:0,9,95
chr10	74099872	.	CAG	C	1581.66	PASS	AB=0.923;AC=7;AF=0.125;AN=56;BaseQRankSum=7.938;DP=648;FS=12.631;HRun=0;HaplotypeScore=101.9657;InbreedingCoeff=0.8437;MQ=58.10;MQ0=14;MQRankSum=0.109;QD=19.53;ReadPosRankSum=2.419;VQSLOD=3.3016;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:32.47:0,32,548	0/1:11,1:12:9.65:10,0,380	0/0:22,0:15:44.87:0,45,636	0/0:25,0:16:32.80:0,33,484	0/0:30,0:30:48.15:0,48,814	0/0:27,0:27:57.18:0,57,1009	0/0:19,0:18:41.80:0,42,736	0/0:28,0:28:74.77:0,75,1101	0/0:27,0:25:62.02:0,62,1046	1/1:3,29:31:78.26:1062,78,0	1/1:3,10:12:18.06:246,18,0	0/0:25,0:25:44.97:0,45,754	0/0:17,0:17:29.82:0,30,458	0/0:15,0:14:33.11:0,33,584	0/0:27,0:26:65.89:0,66,1113	0/0:24,0:24:63.22:0,63,1095	0/0:28,0:28:69.21:0,69,1155	0/0:29,0:29:74.16:0,74,1231	0/0:21,0:21:54.18:0,54,863	0/0:15,0:15:39.13:0,39,677	0/0:24,0:24:50.20:0,50,851	0/0:24,0:24:30.10:0,30,530	0/0:13,0:12:17.75:0,18,319	0/0:33,1:34:21.07:0,21,371	1/1:9,15:22:30.10:410,30,0	0/0:23,0:22:66.22:0,66,1099	0/0:20,0:20:60.16:0,60,975	0/0:15,0:14:33.57:0,34,606
chr10	74101494	.	C	CA	991.72	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.072;DP=560;FS=17.969;HRun=0;HaplotypeScore=73.7616;InbreedingCoeff=0.9830;MQ=77.51;MQ0=4;MQRankSum=0.850;QD=34.20;ReadPosRankSum=1.045;VQSLOD=2.1027;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:69.23:1087,69,0	0/0:5,0:5:15.05:0,15,206	0/0:39,0:26:33.70:0,34,617	0/0:37,0:31:39.74:0,40,587	0/0:17,0:17:51.14:0,51,677	0/0:18,0:18:54.16:0,54,725	0/0:22,0:22:66.21:0,66,903	0/0:20,0:20:50.98:0,51,629	0/0:20,0:20:57.16:0,57,759	0/0:19,0:19:57.19:0,57,797	0/0:14,0:14:42.13:0,42,568	0/0:15,0:15:45.15:0,45,628	0/0:20,0:20:60.20:0,60,837	0/0:15,0:15:39.12:0,39,528	0/0:21,0:21:63.16:0,63,812	0/0:16,0:16:48.15:0,48,655	0/0:20,0:20:46.73:0,47,742	0/0:20,0:20:60.12:0,60,778	0/0:18,0:18:45.12:0,45,605	0/0:18,0:18:54.17:0,54,736	0/0:32,0:32:93.28:0,93,1261	0/0:23,0:23:66.22:0,66,916	0/0:13,0:13:39.13:0,39,540	0/0:26,0:26:78.20:0,78,1044	0/0:21,0:21:63.18:0,63,840	0/0:17,0:17:51.16:0,51,680	0/0:12,0:12:30.09:0,30,401	0/0:10,0:10:30.04:0,30,386
chr10	74104132	.	TACAC	T	346.27	PASS	AB=0.899;AC=8;AF=0.154;AN=52;BaseQRankSum=2.242;DP=476;FS=4.676;HRun=0;HaplotypeScore=77.5698;InbreedingCoeff=0.4153;MQ=73.82;MQ0=14;MQRankSum=0.827;QD=3.61;ReadPosRankSum=1.234;VQSLOD=1.4392;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:20:6.02:0,6,122	0/0:6,0:8:5.73:0,6,34	./.	./.	0/0:9,0:9:5.99:0,6,92	0/0:11,0:11:14.86:0,15,200	0/1:18,1:22:19.71:55,0,20	0/0:23,0:21:4.19:0,4,20	0/0:16,0:18:8.74:0,9,105	0/0:17,0:16:15.04:0,15,261	0/0:9,0:9:12.04:0,12,258	0/0:13,0:12:2.85:0,3,63	1/1:10,2:12:6.02:92,6,0	0/0:13,0:12:18.03:0,18,347	0/0:20,0:20:11.08:0,11,221	0/0:17,0:17:11.99:0,12,183	0/1:19,1:19:15.98:16,0,404	0/0:15,0:15:15.78:0,16,222	0/0:14,0:14:5.99:0,6,92	0/0:9,0:9:14.79:0,15,260	0/0:34,0:32:27.02:0,27,370	0/0:7,0:7:2.31:0,2,17	1/1:13,1:14:9:96,9,0	1/1:25,3:28:17.99:224,18,0	0/0:5,0:4:6.02:0,6,115	0/0:17,0:17:16.36:0,16,203	0/0:27,0:27:21.01:0,21,338	0/0:8,0:8:15.03:0,15,270
chr10	74105089	.	AGTGTGT	A	4242.50	PASS	AB=0.667;AC=11;AF=0.196;AN=56;BaseQRankSum=3.362;DP=781;FS=0.000;HRun=0;HaplotypeScore=187.8472;InbreedingCoeff=0.8759;MQ=66.64;MQ0=4;MQRankSum=-9.522;QD=29.26;ReadPosRankSum=1.003;VQSLOD=3.9221;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:39:11.61:0,12,150	0/0:15,0:15:36.12:0,36,1084	0/0:45,0:28:28.15:0,28,576	0/0:36,0:19:15.10:0,15,383	0/0:21,0:23:60.18:0,60,1661	0/0:19,0:19:45.15:0,45,1356	0/0:24,0:24:39.11:0,39,1105	0/0:28,0:28:60.20:0,60,1723	0/0:32,0:34:93.32:0,93,2805	0/0:24,0:32:69.22:0,69,1470	0/0:6,0:18:45.15:0,45,1176	0/0:10,0:20:42.14:0,42,1096	0/0:15,0:34:33.81:0,34,1883	0/0:27,0:28:63.22:0,63,2004	0/0:44,0:45:99:0,111,3090	0/0:33,0:35:81.26:0,81,2276	0/0:24,0:24:54.18:0,54,1702	0/0:27,0:27:43.31:0,43,692	1/1:11,12:22:39.08:745,39,0	1/1:6,20:27:54.14:1094,54,0	0/1:15,15:30:32.96:185,0,33	0/0:9,0:15:33.11:0,33,780	0/0:9,0:27:45.15:0,45,1153	0/0:15,0:45:96.31:0,96,2402	0/0:4,0:22:39.07:0,39,1009	1/1:10,18:28:27.95:1072,28,0	1/1:4,17:21:29.56:636,30,0	1/1:1,15:16:24.08:509,24,0
chr10	74105771	.	TG	T	3169.80	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=11.330;DP=508;FS=9.405;HRun=8;HaplotypeScore=59.9434;InbreedingCoeff=0.9694;MQ=52.62;MQ0=6;MQRankSum=-5.348;QD=16.60;ReadPosRankSum=1.730;VQSLOD=2.9721;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:19:23.46:306,23,0	0/0:11,0:11:27.07:0,27,315	0/0:8,0:2:6.02:0,6,67	0/0:10,0:4:11.99:0,12,125	0/0:11,0:11:18.06:0,18,217	0/0:24,0:24:66.17:0,66,764	0/0:20,0:20:45.03:0,45,523	0/0:18,0:16:36.08:0,36,419	0/0:16,0:16:39.10:0,39,450	1/1:5,10:15:33:308,33,0	1/1:3,8:10:21.03:202,21,0	1/1:3,27:27:51.08:492,51,0	1/1:1,12:13:24.04:232,24,0	0/0:15,0:14:33.09:0,33,387	0/0:32,0:32:87.24:0,87,1019	0/0:22,0:22:60.17:0,60,713	0/0:23,0:23:60.13:0,60,687	1/1:7,27:33:65.08:605,65,0	0/0:10,0:7:15.02:0,15,164	0/0:14,0:14:33.10:0,33,399	0/0:43,0:43:99:0,99,1183	1/1:0,9:9:18.03:174,18,0	1/1:2,9:10:24.04:231,24,0	1/1:3,26:27:57.09:550,57,0	1/1:2,15:16:30.05:290,30,0	0/0:14,1:15:13.16:0,13,442	0/0:16,0:16:36.11:0,36,435	0/0:9,0:9:24.07:0,24,290
chr10	74106498	.	T	TA	858.76	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-6.248;DP=598;FS=2.373;HRun=8;HaplotypeScore=57.0657;InbreedingCoeff=0.6288;MQ=65.26;MQ0=0;MQRankSum=1.413;QD=22.02;ReadPosRankSum=-0.053;VQSLOD=3.8403;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:81.24:934,81,0	0/0:14,0:14:38.79:0,39,336	0/0:10,0:10:11.63:0,12,120	0/1:9,0:9:31.01:31,0,69	0/0:35,0:35:87.01:0,87,787	0/0:15,0:15:42:0,42,378	0/0:15,0:15:39:0,39,350	0/0:39,0:39:99:0,102,900	0/0:22,0:22:53.98:0,54,484	0/0:30,0:30:81:0,81,727	0/0:19,0:19:57.03:0,57,518	0/0:20,0:20:50.96:0,51,450	0/0:21,0:21:57.02:0,57,518	0/0:19,0:19:47.97:0,48,424	0/0:22,0:22:66.04:0,66,604	0/0:21,0:21:60.01:0,60,543	0/0:31,0:31:81.02:0,81,733	0/0:28,0:28:69:0,69,623	0/0:25,0:25:65.99:0,66,586	0/0:22,0:22:57.01:0,57,517	0/0:20,0:20:60.03:0,60,548	0/0:22,0:22:54.02:0,54,494	0/0:18,0:18:48.02:0,48,438	0/0:12,0:12:30:0,30,269	0/0:21,0:21:60.01:0,60,541	0/0:30,0:30:75:0,75,677	0/0:21,0:21:57.03:0,57,521	0/0:7,0:7:18.01:0,18,164
chr10	74107907	.	AC	A	7524.64	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=17.841;DP=667;FS=4.098;HRun=1;HaplotypeScore=86.1461;InbreedingCoeff=0.9996;MQ=81.02;MQ0=0;MQRankSum=-2.127;QD=34.05;ReadPosRankSum=2.586;VQSLOD=4.8298;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:81.26:1051,81,0	0/0:20,0:20:60.19:0,60,929	0/0:18,0:18:52.98:0,53,783	0/0:20,0:20:60.15:0,60,879	0/0:25,0:25:72.23:0,72,1125	0/0:22,0:22:63.21:0,63,1006	0/0:18,0:18:54.18:0,54,852	0/0:23,0:23:69.22:0,69,1051	0/0:16,0:16:48.16:0,48,764	1/1:0,17:17:48.16:622,48,0	1/1:1,16:17:45.14:576,45,0	1/1:1,24:25:63.20:817,63,0	1/1:0,12:12:30.10:387,30,0	0/0:26,0:26:75.25:0,75,1183	0/0:31,0:31:86.86:0,87,1304	0/0:26,0:26:78.27:0,78,1245	0/0:41,0:41:99:0,123,1939	1/1:0,26:26:72.20:915,72,0	0/0:21,0:21:63.20:0,63,984	0/0:35,0:35:99:0,105,1671	0/0:35,0:35:99:0,105,1644	1/1:0,26:26:72.19:904,72,0	1/1:0,24:24:63.20:816,63,0	1/1:1,23:24:60.20:779,60,0	1/1:0,19:19:51.17:658,51,0	0/0:30,0:30:90.30:0,90,1414	0/0:29,0:29:87.30:0,87,1376	0/0:10,0:10:24.06:0,24,359
chr10	74108088	.	ACTCTCTCTCTCTCTCTCTCT	A	1229.37	PASS	AB=1.000;AC=13;AF=0.260;AN=50;BaseQRankSum=6.456;DP=634;FS=0.000;HRun=0;HaplotypeScore=295.2272;InbreedingCoeff=0.6348;MQ=73.96;MQ0=13;MQRankSum=-3.760;QD=8.09;ReadPosRankSum=0.291;VQSLOD=1.7843;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:33:7.71:27,8,0	0/0:7,0:7:12.04:0,12,626	0/1:39,0:28:8.64:9,0,96	0/0:44,0:25:5.81:0,6,98	0/0:26,0:25:27.91:0,28,1425	0/0:14,0:14:15.03:0,15,742	0/0:23,0:23:24.08:0,24,1874	0/0:35,0:34:6.02:0,6,249	0/0:24,0:24:33.10:0,33,2027	1/1:12,0:15:9.03:391,9,0	./.	1/1:19,0:24:3.01:152,3,0	1/1:11,1:14:9.03:475,9,0	0/0:20,0:20:21.07:0,21,1177	0/0:24,0:25:27.09:0,27,1540	0/0:28,0:29:51.18:0,51,3526	0/0:27,0:26:39.13:0,39,2451	1/1:11,0:11:9.03:320,9,0	0/0:21,0:21:27.09:0,27,1548	0/0:20,0:20:3.01:0,3,51	0/0:34,0:40:30.01:0,30,1394	./.	./.	1/1:10,0:13:0.02:0,0,0	0/0:7,4:12:0.47:0,0,1	0/0:33,0:33:59.79:0,60,3924	0/0:23,0:23:42.14:0,42,3232	0/0:17,0:15:3.01:0,3,279
chr10	74108155	.	GTGTC	G	174.24	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=7.692;DP=733;FS=6.243;HRun=0;HaplotypeScore=187.4648;InbreedingCoeff=0.1910;MQ=44.85;MQ0=30;MQRankSum=-7.348;QD=1.68;ReadPosRankSum=-0.758;VQSLOD=1.6611;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,2:32:5.02:34,5,0	0/0:13,0:13:15.16:0,15,433	0/0:28,0:8:17.05:0,17,309	0/0:23,0:4:8.97:0,9,115	0/0:19,0:18:43.39:0,43,1000	0/0:20,0:20:43.55:0,44,784	0/0:28,0:25:57.02:0,57,1092	0/0:37,0:33:78.96:0,79,1382	0/0:24,0:24:48.66:0,49,1142	0/1:31,0:29:99:172,0,497	0/0:31,0:27:11.98:0,12,130	0/0:51,1:51:16.45:0,16,480	0/1:23,0:23:48.33:48,0,240	0/0:15,0:14:32.67:0,33,619	0/0:26,0:25:42.88:0,43,1051	0/0:27,0:26:66.41:0,66,1253	0/0:28,1:29:56.91:0,57,1122	0/1:16,0:13:33.06:33,0,100	0/0:25,0:23:56.88:0,57,725	0/0:12,0:10:24.07:0,24,521	0/0:33,0:33:69.10:0,69,1186	0/0:35,0:34:17.28:0,17,226	0/0:27,0:25:17.82:0,18,148	0/0:33,0:33:23.77:0,24,263	0/0:21,0:21:12.40:0,12,125	0/0:34,0:33:71.61:0,72,1515	0/0:22,0:22:55.47:0,55,1140	0/0:14,0:12:0.11:0,0,475
chr10	74108157	.	GTC	G	193.01	PASS	AB=0.973;AC=5;AF=0.089;AN=56;BaseQRankSum=7.981;DP=739;FS=15.510;HRun=0;HaplotypeScore=170.3691;InbreedingCoeff=0.2266;MQ=45.15;MQ0=29;MQRankSum=-6.596;QD=1.87;ReadPosRankSum=-1.259;VQSLOD=1.5820;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,13:32:8.21:94,8,0	0/0:13,0:13:14.43:0,14,322	0/0:31,0:9:20.03:0,20,262	0/0:25,0:6:8.09:0,8,100	0/0:18,0:17:46.68:0,47,686	0/0:19,0:19:27.56:0,28,508	0/0:28,0:25:55.64:0,56,766	0/0:39,0:34:55.74:0,56,1035	0/0:23,0:22:48.64:0,49,752	0/1:31,0:29:99:117,0,340	0/0:30,1:27:12:0,12,111	0/0:52,0:51:27.48:0,27,426	0/1:21,2:23:26.91:27,0,169	0/0:17,0:16:35.25:0,35,456	0/0:26,0:26:37.17:0,37,770	0/0:27,0:26:45.32:0,45,819	0/0:28,0:28:53.65:0,54,758	0/1:16,0:13:29.60:71,0,30	0/0:27,0:25:64.42:0,64,632	0/0:11,0:10:24.07:0,24,354	0/0:34,0:34:65.83:0,66,834	0/0:35,1:36:20.24:0,20,203	0/0:25,2:25:17.82:0,18,148	0/0:34,0:34:23.75:0,24,230	0/0:21,0:21:11.84:0,12,101	0/0:33,0:32:64.29:0,64,1117	0/0:22,0:22:59.57:0,60,848	0/0:14,0:12:0.11:0,0,304
chr10	74108169	.	GTATA	G	371.49	PASS	AB=0.841;AC=6;AF=0.107;AN=56;BaseQRankSum=7.435;DP=801;FS=0.000;HRun=0;HaplotypeScore=190.4832;InbreedingCoeff=0.2187;MQ=47.88;MQ0=21;MQRankSum=-6.005;QD=2.24;ReadPosRankSum=0.407;VQSLOD=2.2707;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:8.97:119,9,0	0/0:13,0:13:36.08:0,36,929	0/0:43,0:14:35.30:0,35,1054	0/0:33,0:14:42.14:0,42,1027	0/0:21,0:20:54.16:0,54,1425	0/0:22,0:22:51.05:0,51,1323	0/0:25,0:23:63.22:0,63,1748	0/0:47,0:43:99:0,126,3228	0/0:23,0:23:66.12:0,66,1679	0/1:26,7:30:99:247,0,1396	0/0:17,11:23:15.03:0,15,403	0/1:40,14:53:12.62:13,0,1497	0/1:19,10:29:54.26:54,0,1093	0/0:18,0:18:48.16:0,48,1310	0/0:28,0:28:40.45:0,40,1957	0/0:26,0:25:72.21:0,72,1847	0/0:29,0:29:68.96:0,69,1852	0/1:16,0:14:62.02:62,0,68	0/0:29,0:26:74.98:0,75,1705	0/0:17,0:16:42.14:0,42,1046	0/0:36,0:34:81.28:0,81,2143	0/0:30,10:40:38.39:0,38,1002	0/0:21,9:28:26.94:0,27,710	0/0:30,6:36:32.90:0,33,861	0/0:17,3:20:15.45:0,15,399	0/0:28,0:28:81.22:0,81,2160	0/0:26,0:26:51.41:0,51,1773	0/0:17,0:16:36.12:0,36,918
chr10	74108171	.	ATATG	A	246.65	PASS	AB=0.980;AC=5;AF=0.089;AN=56;BaseQRankSum=7.373;DP=795;FS=1.937;HRun=0;HaplotypeScore=185.9610;InbreedingCoeff=0.2714;MQ=48.47;MQ0=18;MQRankSum=-6.590;QD=2.28;ReadPosRankSum=1.061;VQSLOD=2.8990;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:34:8.97:179,9,0	0/0:13,0:13:36.12:0,36,950	0/0:43,0:15:44.98:0,45,1141	0/0:33,0:15:44.74:0,45,1040	0/0:21,0:20:57.18:0,57,1485	0/0:22,0:22:49.29:0,49,1326	0/0:25,0:23:63.22:0,63,1740	0/0:48,0:44:99:0,129,3331	0/0:24,0:24:69.23:0,69,1771	0/1:30,0:27:99:140,0,1393	0/0:27,1:23:18.04:0,18,462	0/0:50,1:51:3.54:0,4,1515	0/1:28,0:28:21.99:22,0,1203	0/0:18,0:18:48.16:0,48,1333	0/0:29,0:29:61.30:0,61,2040	0/0:26,0:25:69.22:0,69,1829	0/0:29,0:29:69.17:0,69,1830	0/1:14,1:14:22.47:22,0,99	0/0:29,0:26:69.20:0,69,1609	0/0:17,0:16:42.13:0,42,1069	0/0:36,0:34:81.13:0,81,2121	0/0:39,0:39:38.39:0,38,1059	0/0:28,1:27:26.94:0,27,745	0/0:34,1:35:32.90:0,33,905	0/0:19,0:19:15.45:0,15,409	0/0:27,0:27:78.26:0,78,2070	0/0:27,0:27:69.22:0,69,1850	0/0:19,0:19:45.15:0,45,1197
chr10	74109967	.	ATTGTTG	A	1051.48	PASS	AB=0.975;AC=14;AF=0.250;AN=56;BaseQRankSum=7.820;DP=494;FS=16.261;HRun=0;HaplotypeScore=110.5202;InbreedingCoeff=0.4892;MQ=61.93;MQ0=4;MQRankSum=-6.677;QD=11.81;ReadPosRankSum=0.119;VQSLOD=1.7721;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:8:3.01:36,3,0	0/0:11,0:11:30.08:0,30,753	0/0:12,0:9:15.05:0,15,246	0/0:21,0:16:18.02:0,18,282	0/0:25,0:24:66.18:0,66,1725	0/0:27,0:27:72.25:0,72,2050	0/0:14,0:14:24.06:0,24,495	0/0:40,0:37:72.21:0,72,1178	0/0:19,0:19:39.13:0,39,859	1/1:17,1:18:30.10:447,30,0	1/1:2,5:7:6.02:127,6,0	0/1:10,0:10:55.88:56,0,73	0/1:5,0:5:28:28,0,42	0/0:19,0:19:42.14:0,42,1195	0/0:16,0:16:30.09:0,30,765	0/0:21,0:21:48.13:0,48,1126	0/0:36,0:35:84.27:0,84,2111	0/1:8,1:9:15.27:55,0,15	0/0:24,0:24:48.10:0,48,1034	0/0:20,0:20:48.16:0,48,1188	0/0:13,0:12:24.08:0,24,593	1/1:4,0:4:3.01:34,3,0	0/1:9,0:9:54.62:55,0,127	0/0:10,0:10:3:0,3,44	1/1:7,12:19:18.06:382,18,0	0/0:24,0:24:50.77:0,51,1146	0/0:32,0:32:60.20:0,60,1608	0/0:21,0:20:45.13:0,45,1106
chr10	74109979	.	G	GTTA	512.94	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=8.019;DP=449;FS=25.062;HRun=0;HaplotypeScore=78.3837;InbreedingCoeff=0.5048;MQ=57.51;MQ0=5;MQRankSum=-4.484;QD=6.11;ReadPosRankSum=-3.778;VQSLOD=-0.3654;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:9:13.08:13,0,31	0/0:10,0:10:30.05:0,30,421	0/0:11,0:6:15.04:0,15,181	0/0:16,0:10:26.98:0,27,316	0/0:26,0:26:78.15:0,78,1105	0/0:25,0:25:75.24:0,75,1195	0/0:11,0:11:30.04:0,30,384	0/0:39,0:36:99:0,102,1242	0/0:16,0:16:48.08:0,48,644	0/1:16,0:16:7.04:112,0,7	0/1:6,0:6:6.85:31,0,7	1/1:5,2:8:17.80:192,18,0	1/1:4,0:4:5.94:44,6,0	0/0:19,0:19:54.08:0,54,735	0/0:14,0:14:42.03:0,42,515	0/0:19,0:19:57.10:0,57,778	0/0:39,0:38:99:0,105,1440	0/1:11,0:11:16.52:17,0,76	0/0:22,0:22:62.89:0,63,761	0/0:17,0:17:51.13:0,51,756	0/0:12,0:11:30:0,30,348	1/1:3,0:3:5.92:42,6,0	1/1:3,4:7:6.48:117,6,0	1/1:4,1:5:8.92:98,9,0	0/1:15,0:15:19.69:20,0,52	0/0:22,0:22:63.17:0,63,924	0/0:24,0:24:72.17:0,72,1054	0/0:23,0:22:66.04:0,66,843
chr10	74110583	.	C	CA	1559.60	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-0.423;DP=586;FS=4.696;HRun=10;HaplotypeScore=73.3617;InbreedingCoeff=0.8812;MQ=81.56;MQ0=0;MQRankSum=-0.464;QD=14.05;ReadPosRankSum=-0.054;VQSLOD=3.8315;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,135,1096	0/0:10,0:10:20.94:0,21,167	0/1:23,0:20:10.61:11,0,99	0/0:29,0:29:20.04:0,20,170	0/0:18,1:19:18.93:0,19,358	0/0:14,0:15:37.99:0,38,301	0/0:21,0:23:61.79:0,62,482	0/0:27,0:27:65.89:0,66,539	0/0:23,1:24:30.89:0,31,455	0/0:19,0:19:47.94:0,48,394	0/0:9,0:9:20.96:0,21,170	1/1:5,20:25:51.13:544,51,0	1/1:8,10:19:11.40:303,11,0	0/0:14,0:14:26.96:0,27,222	0/0:24,0:24:56.86:0,57,465	0/0:29,1:31:41.90:0,42,534	0/0:22,0:22:62.91:0,63,513	0/0:20,0:20:44.90:0,45,362	0/0:15,0:15:41.95:0,42,344	0/0:15,0:15:41.95:0,42,345	0/0:26,0:26:53.89:0,54,441	1/1:2,11:13:23.89:238,24,0	1/1:0,8:8:21.05:224,21,0	1/1:3,20:23:39.10:416,39,0	0/0:20,0:20:50.90:0,51,413	0/0:26,0:26:68.91:0,69,565	0/0:24,0:24:65.86:0,66,532	0/0:13,0:13:38.96:0,39,320
chr10	74110902	.	TGTCTCCAGTTTAGGCCTAGGTTACAGTCATTGTTCAAA	T	1064.36	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.409;DP=716;FS=0.000;HRun=0;HaplotypeScore=633.5393;InbreedingCoeff=0.9643;MQ=82.35;MQ0=0;MQRankSum=-3.427;QD=88.70;ReadPosRankSum=2.050;VQSLOD=-0.4238;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:73,0:73:99:0,208,29632	0/0:13,0:13:33.11:0,33,4724	0/0:26,0:26:72.24:0,72,4629	0/0:14,0:14:39.13:0,39,2532	0/0:24,0:24:69.24:0,69,8898	0/0:17,0:17:51.16:0,51,6634	0/0:33,0:33:99:0,99,12067	0/0:21,0:21:57.16:0,57,4214	0/0:22,0:22:66.23:0,66,8509	0/0:24,0:24:69.24:0,69,9445	0/0:17,0:17:51.18:0,51,6617	0/0:24,0:24:63.22:0,63,7249	0/0:18,0:18:51.18:0,51,7288	0/0:20,0:20:57.20:0,57,7086	0/0:40,0:40:99:0,111,16418	0/0:33,0:33:99:0,99,13468	0/0:34,0:34:99:0,102,12515	1/1:5,7:12:12.04:1150,12,0	0/0:20,0:20:57.20:0,57,6265	0/0:28,0:28:84.29:0,84,11398	0/0:37,0:37:99:0,108,15626	0/0:19,0:19:57.20:0,57,8230	0/0:21,0:21:60.21:0,60,8881	0/0:25,0:25:72.25:0,72,8535	0/0:34,0:34:99:0,102,14871	0/0:31,0:31:93.32:0,93,11843	0/0:29,0:29:87.30:0,87,10157	0/0:7,0:7:21.07:0,21,2909
chr10	74114505	.	TAA	T	1230.10	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=7.262;DP=419;FS=3.869;HRun=9;HaplotypeScore=56.2518;InbreedingCoeff=0.7927;MQ=72.28;MQ0=1;MQRankSum=0.432;QD=19.53;ReadPosRankSum=1.124;VQSLOD=2.0966;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.17:0,51,834	0/0:7,0:7:18.05:0,18,271	0/0:19,0:11:5.67:0,6,280	0/1:15,0:9:32.27:32,0,111	0/0:13,0:13:36.12:0,36,588	0/0:14,0:14:42.14:0,42,689	0/0:10,0:10:30.10:0,30,492	0/0:34,0:34:97.57:0,98,1579	0/0:11,0:11:27.09:0,27,443	1/1:2,11:13:36.04:402,36,0	1/1:1,12:13:30.08:350,30,0	0/0:11,0:11:27.09:0,27,433	0/0:14,0:14:39.13:0,39,631	0/0:13,0:13:33.11:0,33,541	0/0:9,0:9:27.09:0,27,441	0/0:6,0:6:18.06:0,18,294	0/0:27,0:27:78.26:0,78,1261	0/0:1,0:21:47.41:0,47,167	0/0:14,0:15:44.64:0,45,696	0/0:18,0:18:45.15:0,45,737	0/0:11,0:11:24.08:0,24,391	0/0:5,0:5:12.04:0,12,197	0/0:11,0:11:33.11:0,33,537	0/0:12,0:12:30.10:0,30,492	1/1:1,20:21:51.15:594,51,0	0/0:24,0:24:69.24:0,69,1131	0/0:23,0:23:63.21:0,63,1021	0/0:9,0:9:27.09:0,27,441
chr10	74114795	.	GA	G	6970.57	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.247;DP=598;FS=1.025;HRun=3;HaplotypeScore=60.1297;InbreedingCoeff=0.9890;MQ=80.17;MQ0=0;MQRankSum=-1.438;QD=33.04;ReadPosRankSum=4.819;VQSLOD=5.0527;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,56:56:99:1892,153,0	0/0:9,0:9:27.09:0,27,389	0/0:17,0:17:45.11:0,45,592	0/0:17,0:17:40.09:0,40,560	0/0:19,0:19:57.17:0,57,779	0/0:16,0:16:48.14:0,48,656	0/0:27,0:27:81.20:0,81,1058	0/0:27,0:27:81.23:0,81,1113	0/0:16,0:16:48.14:0,48,671	1/1:0,18:18:54.16:657,54,0	1/1:0,16:16:39.04:463,39,0	1/1:1,25:26:69.17:838,69,0	1/1:1,20:21:54.17:669,54,0	0/0:22,0:22:66.22:0,66,950	0/0:23,0:23:69.22:0,69,975	0/0:17,0:17:45.15:0,45,647	0/0:33,0:33:99:0,99,1344	1/1:1,26:27:75.24:929,75,0	0/0:16,0:16:48.14:0,48,655	0/0:13,0:13:36.12:0,36,518	0/0:63,0:63:99:0,178,2435	1/1:0,4:4:9.03:111,9,0	1/1:0,9:9:21.07:260,21,0	1/1:0,25:25:69.22:855,69,0	1/1:0,9:9:24.08:297,24,0	0/0:17,0:17:51.16:0,51,719	0/0:29,0:29:87.21:0,87,1206	0/0:6,0:6:18.06:0,18,258
chr10	74116140	.	A	AC	2809.53	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.224;DP=635;FS=1.416;HRun=7;HaplotypeScore=81.1607;InbreedingCoeff=0.9952;MQ=82.29;MQ0=0;MQRankSum=0.841;QD=30.21;ReadPosRankSum=1.676;VQSLOD=3.8256;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:54.06:0,54,516	0/0:6,0:6:18.03:0,18,174	0/0:13,0:14:29.89:0,30,258	0/0:22,0:21:44.37:0,44,393	0/0:26,0:26:75.11:0,75,719	0/0:25,0:25:69.08:0,69,655	0/0:23,0:23:46.41:0,46,506	0/0:29,0:29:57.06:0,57,542	0/0:23,0:23:48.06:0,48,461	1/1:1,17:18:51.16:616,51,0	1/1:1,28:29:75.23:905,75,0	0/0:18,0:18:51.08:0,51,492	0/0:14,0:14:39.05:0,39,370	0/0:20,0:20:54.08:0,54,521	0/0:26,0:26:69.08:0,69,657	0/0:14,0:14:33.05:0,33,319	0/0:41,0:40:99:0,117,1115	1/1:0,24:24:69.21:834,69,0	0/0:24,0:24:57.08:0,57,550	0/0:26,0:26:66.10:0,66,636	0/0:43,0:43:99:0,120,1154	0/0:16,0:16:42.07:0,42,405	0/0:27,0:27:66.09:0,66,632	0/0:28,0:28:75.10:0,75,717	1/1:4,18:22:51.16:616,51,0	0/0:32,1:33:56.76:0,57,811	0/0:16,0:16:37.87:0,38,352	0/0:6,0:6:18.03:0,18,174
chr10	74116641	.	A	AAAAC	2875.97	PASS	AB=0.947;AC=11;AF=0.196;AN=56;BaseQRankSum=-7.687;DP=697;FS=14.435;HRun=0;HaplotypeScore=117.0516;InbreedingCoeff=0.8414;MQ=60.75;MQ0=2;MQRankSum=2.431;QD=23.77;ReadPosRankSum=1.201;VQSLOD=2.7436;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:27:18.47:0,18,117	0/0:7,0:7:9.03:0,9,144	0/0:17,0:16:6.02:0,6,89	0/0:29,0:23:15.03:0,15,219	0/0:25,0:25:51.16:0,51,787	0/0:22,0:22:48.16:0,48,767	0/0:29,0:29:52.42:0,52,808	0/0:40,0:40:45.09:0,45,619	0/0:27,0:27:51.17:0,51,809	0/0:32,0:32:75.23:0,75,1155	0/0:25,0:25:54.16:0,54,819	1/1:4,15:20:33.11:793,33,0	1/1:13,7:20:21.07:491,21,0	0/0:20,0:20:33.11:0,33,527	0/0:39,0:39:78.25:0,78,1223	0/0:23,0:23:36.10:0,36,532	0/0:38,0:38:80.29:0,80,1216	0/0:37,0:38:57.19:0,57,906	0/0:17,0:15:27.09:0,27,427	0/0:21,0:21:48.13:0,48,701	0/1:17,1:18:29.91:30,0,572	1/1:13,6:19:12:236,12,0	1/1:6,13:19:27.09:648,27,0	1/1:9,15:25:36.12:855,36,0	0/0:29,0:29:54.18:0,54,865	0/0:25,0:25:51.16:0,51,773	0/0:25,0:25:42.12:0,42,644	0/0:21,0:21:27.09:0,27,409
chr10	74116867	.	T	TTC	2710.68	PASS	AB=0.950;AC=15;AF=0.288;AN=52;BaseQRankSum=-0.344;DP=582;FS=2.885;HRun=0;HaplotypeScore=103.7616;InbreedingCoeff=0.2938;MQ=65.65;MQ0=12;MQRankSum=0.286;QD=11.58;ReadPosRankSum=-0.027;VQSLOD=3.1284;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:10.23:0,10,40	0/0:13,0:13:20.86:0,21,204	./.	./.	0/0:9,0:28:20.20:0,20,98	0/1:18,0:18:17.12:17,0,125	0/0:11,0:16:27.51:0,28,178	0/0:25,0:23:18.50:0,18,182	0/0:16,0:18:23.73:0,24,228	0/1:31,0:31:74.89:430,0,75	1/1:26,0:26:41.98:443,42,0	1/1:13,0:13:6.46:49,6,0	0/0:11,0:10:9.33:0,9,48	0/1:11,12:24:27.63:432,0,28	1/1:6,19:25:5.75:511,6,0	0/0:17,0:18:20.87:0,21,214	0/1:12,0:12:12.11:12,0,69	0/0:8,0:15:0.01:0,0,64	0/0:9,0:10:2.84:0,3,14	0/0:22,0:23:33.63:0,34,323	0/0:18,0:18:14.47:0,14,166	0/1:11,0:11:24.86:25,0,31	0/0:23,0:23:16.57:0,17,101	0/1:26,0:26:0.07:98,0,0	0/1:27,0:26:12.60:435,0,13	1/1:8,13:21:34.90:423,35,0	0/0:25,0:25:42.16:0,42,431	0/0:24,0:22:35.93:0,36,377
chr10	74116895	.	CTCTCTCTT	C	714.68	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=0.390;DP=658;FS=18.781;HRun=0;HaplotypeScore=184.4398;InbreedingCoeff=0.5289;MQ=55.48;MQ0=16;MQRankSum=-0.944;QD=6.11;ReadPosRankSum=-2.001;VQSLOD=1.3551;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:21:39.15:39,0,286	0/0:13,0:13:33.09:0,33,1123	0/0:33,0:10:10.33:0,10,156	0/0:38,0:9:4.09:0,4,73	0/0:31,0:31:47.47:0,47,685	0/0:28,0:28:69.06:0,69,1428	0/0:18,0:18:48.09:0,48,887	0/0:36,0:35:84.16:0,84,1651	0/0:17,0:17:45.09:0,45,1385	0/0:33,0:33:87.14:0,87,2036	0/0:28,0:28:62.91:0,63,1340	0/1:15,0:14:15.06:121,0,15	1/1:11,1:11:23.64:242,24,0	0/0:22,0:22:45.09:0,45,1315	0/0:27,0:27:52.41:0,52,1663	0/0:15,0:15:38.81:0,39,908	0/0:17,0:17:21.02:0,21,666	0/0:15,0:14:33.05:0,33,604	0/0:10,0:10:29.90:0,30,287	0/0:30,0:30:69.04:0,69,1456	0/0:13,0:13:31.29:0,31,852	0/1:16,0:15:34.12:34,0,245	1/1:8,17:25:4.69:159,5,0	1/1:25,1:25:27.39:271,27,0	0/0:33,0:33:79.16:0,79,1927	0/0:21,0:21:54.06:0,54,1202	0/0:36,0:36:89.61:0,90,2239	0/0:27,0:21:54.12:0,54,1473
chr10	74116897	.	CTCTCTT	C	1043.02	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=0.468;DP=659;FS=2.403;HRun=0;HaplotypeScore=161.6836;InbreedingCoeff=0.4665;MQ=55.58;MQ0=15;MQRankSum=0.277;QD=7.90;ReadPosRankSum=-2.376;VQSLOD=2.6208;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:21:52.46:52,0,124	0/0:14,0:14:39.10:0,39,984	0/0:34,0:10:10.32:0,10,150	0/0:39,0:10:10.09:0,10,120	0/0:28,0:28:45.52:0,46,515	0/0:29,0:29:57.10:0,57,1191	0/0:18,0:18:47.59:0,48,733	0/0:34,0:34:90.63:0,91,1464	0/0:18,0:18:48.09:0,48,1152	0/0:32,0:32:88.91:0,89,1601	0/0:27,0:27:24.54:0,25,998	1/1:13,1:13:30.37:246,30,0	1/1:9,2:11:6:278,6,0	0/0:22,0:22:47.83:0,48,1034	0/0:27,0:27:52.41:0,52,1268	0/0:15,0:15:38.82:0,39,817	0/1:16,0:16:19.78:20,0,516	0/0:16,0:15:35.01:0,35,434	0/0:11,0:11:32.90:0,33,290	0/0:31,0:31:69.44:0,69,1245	0/0:13,0:13:31.28:0,31,725	0/1:17,0:16:45.72:102,0,46	0/1:25,0:25:57.47:75,0,57	1/1:23,3:25:39:426,39,0	0/0:33,0:33:60.65:0,61,1502	0/0:23,0:23:35.56:0,36,893	0/0:37,0:37:90.13:0,90,1925	0/0:26,0:20:53.62:0,54,1279
chr10	74116899	.	C	CTT	3551.45	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-0.934;DP=664;FS=14.763;HRun=1;HaplotypeScore=114.6134;InbreedingCoeff=0.4240;MQ=55.53;MQ0=14;MQRankSum=1.375;QD=16.07;ReadPosRankSum=1.537;VQSLOD=-0.2157;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:32.69:0,33,293	0/0:14,0:14:39.01:0,39,435	0/0:33,0:9:8.21:0,8,151	0/0:41,0:10:17.58:0,18,160	0/1:27,0:27:5.71:6,0,198	0/0:29,0:29:56.74:0,57,597	0/0:19,0:19:56.85:0,57,524	0/0:32,0:32:68.25:0,68,883	0/0:17,0:17:44.97:0,45,487	1/1:7,24:33:10.40:1034,10,0	1/1:4,24:28:69.32:934,69,0	0/0:13,0:13:22.16:0,22,182	0/0:13,0:13:29.38:0,29,221	0/1:22,0:22:99:166,0,121	0/1:28,0:28:99:188,0,138	0/0:15,0:15:38.95:0,39,437	0/0:15,0:16:35.65:0,36,305	0/0:17,0:16:38.72:0,39,284	0/0:13,0:13:32.83:0,33,261	0/0:31,0:31:70.39:0,70,792	0/0:14,0:14:33.43:0,33,370	0/0:14,0:16:35.93:0,36,316	0/0:25,0:25:10.76:0,11,262	0/1:26,0:25:12.18:12,0,199	1/1:24,10:34:70.20:1126,70,0	0/1:23,0:23:84.95:85,0,242	0/0:37,0:37:97.31:0,97,1075	0/0:24,0:20:54.44:0,54,657
chr10	74116990	.	A	ATCTCTCTCTGTC	2356.34	PASS	AB=0.887;AC=19;AF=0.352;AN=54;BaseQRankSum=4.821;DP=722;FS=13.028;HRun=0;HaplotypeScore=253.1066;InbreedingCoeff=0.6319;MQ=63.79;MQ0=15;MQRankSum=-5.015;QD=8.99;ReadPosRankSum=-1.728;VQSLOD=0.9789;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:6.01:92,6,0	0/0:7,0:7:9.03:0,9,250	0/0:49,0:21:2.59:0,3,21	./.	0/0:27,0:27:26.82:0,27,731	0/1:22,0:22:0.60:1,0,898	0/0:15,0:15:18.93:0,19,448	0/0:34,0:34:12.01:0,12,126	0/0:27,0:27:47.94:0,48,1523	1/1:39,1:37:39.59:1350,40,0	1/1:15,2:16:3.01:65,3,0	1/1:21,0:21:6.36:178,6,0	1/1:26,0:26:9.64:246,10,0	0/0:19,0:19:33.11:0,33,1035	0/0:30,0:30:66.20:0,66,1928	0/0:24,0:24:39.12:0,39,1088	0/0:19,0:19:26.81:0,27,777	1/1:10,3:15:6.02:299,6,0	0/0:16,0:15:9.03:0,9,244	0/0:20,0:20:21.07:0,21,588	0/0:30,0:30:45.12:0,45,1208	1/1:23,0:23:5.49:68,5,0	0/1:25,0:25:2.99:65,0,3	1/1:12,0:12:3.01:48,3,0	0/1:17,18:35:16.95:118,0,17	0/0:35,0:35:51.13:0,51,1522	0/0:34,0:33:57.16:0,57,1614	0/0:16,0:16:27.09:0,27,920
chr10	74117012	.	G	GTC	929.31	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=7.715;DP=751;FS=20.691;HRun=0;HaplotypeScore=135.8809;InbreedingCoeff=0.8067;MQ=61.04;MQ0=11;MQRankSum=-1.569;QD=6.41;ReadPosRankSum=-0.501;VQSLOD=1.9272;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,18:25:9.03:134,9,0	0/0:5,0:5:15.05:0,15,189	0/0:42,0:22:29.28:0,29,312	0/0:57,0:20:1.26:0,1,133	0/0:29,0:29:64.03:0,64,779	0/0:25,0:25:60.15:0,60,721	0/0:23,0:23:30.14:0,30,557	0/0:35,0:35:78.23:0,78,957	0/0:31,0:31:75.24:0,75,952	0/0:41,0:40:71.92:0,72,1113	0/0:17,0:16:15.03:0,15,177	1/1:22,0:22:18.71:222,19,0	1/1:25,1:26:19.88:211,20,0	0/0:25,0:25:66.20:0,66,823	0/0:36,0:36:99:0,99,1242	0/0:27,0:27:75.23:0,75,939	0/0:21,0:21:41.13:0,41,505	0/1:12,0:11:43.18:43,0,96	0/0:16,0:15:36.10:0,36,429	0/0:19,0:19:45.13:0,45,555	0/0:39,0:39:99:0,102,1279	1/1:21,1:22:13.41:236,13,0	1/1:22,1:22:17.73:227,18,0	1/1:14,1:15:5.92:35,6,0	0/0:30,0:30:12.37:0,12,254	0/0:31,0:31:81.25:0,81,1011	0/0:35,0:33:93.29:0,93,1153	0/0:22,0:22:45.51:0,46,548
chr10	74117024	.	G	GTCTC	1260.22	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=7.231;DP=743;FS=3.921;HRun=0;HaplotypeScore=155.5133;InbreedingCoeff=0.6073;MQ=60.29;MQ0=6;MQRankSum=-2.815;QD=4.55;ReadPosRankSum=-2.558;VQSLOD=2.2592;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:21:8.40:95,8,0	0/0:5,0:5:12.04:0,12,205	0/0:37,0:23:48.59:0,49,694	0/1:48,0:17:10.98:11,0,154	0/0:26,0:26:60.07:0,60,984	0/0:23,0:23:66.17:0,66,1061	0/0:20,0:20:25.96:0,26,716	0/0:34,0:34:69.19:0,69,1053	0/0:28,0:28:72.23:0,72,1209	0/1:41,0:40:40.17:40,0,1053	0/0:21,0:20:27.09:0,27,439	1/1:12,15:27:8.64:226,9,0	1/1:8,16:26:15.05:329,15,0	0/0:27,0:27:69.22:0,69,1142	0/0:39,0:39:99:0,99,1561	0/0:30,0:30:72.22:0,72,1171	0/0:19,0:19:38.55:0,39,629	0/1:16,0:15:33.22:33,0,247	0/0:15,0:15:30.08:0,30,466	0/0:17,0:17:42.14:0,42,714	0/0:37,0:37:75.24:0,75,1251	1/1:20,3:24:23.55:326,24,0	1/1:17,6:23:9.22:126,9,0	1/1:15,1:17:14.27:226,14,0	0/1:33,0:33:33.46:33,0,250	0/0:28,0:28:72.24:0,72,1209	0/0:39,0:37:93.24:0,93,1476	0/0:21,0:21:45.09:0,45,729
chr10	74117263	.	AGT	A	2868.21	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.319;DP=1144;FS=5.333;HRun=0;HaplotypeScore=160.7864;InbreedingCoeff=0.9988;MQ=56.77;MQ0=12;MQRankSum=2.624;QD=28.12;ReadPosRankSum=-0.115;VQSLOD=4.4210;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,144,2344	0/0:10,0:10:30.10:0,30,519	0/0:49,0:22:44.11:0,44,535	0/0:43,0:16:22.86:0,23,462	0/0:40,0:40:99:0,114,1854	0/0:39,0:39:86.87:0,87,1629	0/0:42,0:42:99:0,114,1898	0/0:60,0:57:99:0,139,2281	0/0:51,0:51:99:0,138,2367	1/1:22,27:49:99:1590,120,0	1/1:1,26:27:48.08:639,48,0	0/0:48,0:48:99:0,117,2001	0/0:43,0:43:99:0,126,2083	0/0:48,0:48:99:0,129,2066	0/0:41,0:41:99:0,111,1887	0/0:38,0:38:99:0,102,1685	0/0:36,0:36:77.63:0,78,1445	0/0:25,0:25:72.10:0,72,1104	0/0:24,0:21:48.11:0,48,723	0/0:35,0:35:99:0,105,1762	0/0:96,0:96:99:0,241,4051	0/0:40,0:40:99:0,99,1649	0/0:28,0:28:63.20:0,63,1051	0/0:52,0:52:99:0,128,2128	1/1:10,16:25:60.01:782,60,0	0/0:34,0:34:96.29:0,96,1574	0/0:44,0:44:99:0,123,2059	0/0:16,0:16:47.32:0,47,690
chr10	74117359	.	A	AGTGT	4035.52	PASS	AB=0.990;AC=8;AF=0.143;AN=56;BaseQRankSum=-5.341;DP=992;FS=0.449;HRun=0;HaplotypeScore=193.7211;InbreedingCoeff=0.6600;MQ=58.76;MQ0=7;MQRankSum=-2.171;QD=23.46;ReadPosRankSum=-2.850;VQSLOD=2.8997;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:48:99:0,105,1608	0/0:7,0:7:18.03:0,18,245	0/0:46,0:29:11.43:0,11,123	0/0:42,0:23:2.51:0,3,147	0/0:29,0:29:39.26:0,39,958	0/0:20,0:20:51.15:0,51,782	0/0:32,0:33:63.14:0,63,889	0/0:44,0:49:67.47:0,67,1085	0/0:37,0:40:80.68:0,81,1254	1/1:15,30:48:99:2243,105,0	1/1:11,6:19:29.82:596,30,0	0/0:40,0:40:87.23:0,87,1321	0/0:39,0:41:87.24:0,87,1311	0/0:39,0:43:99:0,99,1476	0/0:38,0:38:90.29:0,90,1449	0/0:32,0:33:81.23:0,81,1244	0/0:36,0:37:65.87:0,66,1032	0/0:12,0:25:30.01:0,30,279	0/1:20,0:22:19.56:20,0,460	0/0:23,0:26:45.12:0,45,668	0/0:70,0:73:99:0,129,2225	0/0:34,0:35:78.21:0,78,1182	0/0:21,0:22:33.11:0,33,519	0/0:52,0:53:99:0,129,2065	1/1:10,21:32:48.09:1136,48,0	0/1:43,1:51:41.07:41,0,1296	0/0:25,0:27:66.19:0,66,1012	0/0:10,0:11:27.09:0,27,421
chr10	74118936	.	AAG	A	243.99	PASS	AB=0.968;AC=9;AF=0.161;AN=56;BaseQRankSum=9.294;DP=539;FS=12.268;HRun=0;HaplotypeScore=81.6809;InbreedingCoeff=0.2125;MQ=55.25;MQ0=17;MQRankSum=-1.425;QD=1.81;ReadPosRankSum=1.666;VQSLOD=0.6629;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:17.15:0,17,127	0/0:7,0:7:18.04:0,18,236	0/0:22,0:5:4.53:0,5,23	0/1:22,0:12:10.91:11,0,67	0/0:22,0:21:31.73:0,32,437	0/0:19,0:19:50.96:0,51,600	0/0:17,0:16:38.09:0,38,367	0/0:29,0:28:49.71:0,50,591	0/0:20,0:20:11.07:0,11,441	0/1:19,1:20:17.50:17,0,142	0/0:15,0:15:15.20:0,15,97	0/1:17,1:17:42.40:44,0,42	0/1:15,1:16:42.10:42,0,70	0/0:9,0:9:23.81:0,24,242	0/0:11,0:11:20.94:0,21,232	0/0:8,0:8:9.85:0,10,256	0/0:33,0:33:90.64:0,91,954	0/0:18,0:17:50.88:0,51,556	0/0:22,0:20:20.18:0,20,495	0/0:18,0:17:48.22:0,48,485	0/0:20,0:17:46.09:0,46,550	0/1:19,0:19:25.02:58,0,25	1/1:19,2:20:1.38:105,1,0	1/1:19,0:18:10.90:104,11,0	0/0:16,0:15:32.45:0,32,154	0/0:16,0:13:35.01:0,35,412	0/0:23,0:22:61.95:0,62,619	0/0:13,0:10:29.59:0,30,305
chr10	74118938	.	GAA	G	1698.16	PASS	AB=0.602;AC=14;AF=0.250;AN=56;BaseQRankSum=8.815;DP=545;FS=5.631;HRun=13;HaplotypeScore=78.0766;InbreedingCoeff=0.8236;MQ=56.17;MQ0=16;MQRankSum=0.595;QD=9.99;ReadPosRankSum=6.531;VQSLOD=1.7900;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:45:80:344,80,0	0/0:8,0:8:24.07:0,24,319	0/0:24,0:6:8.07:0,8,34	0/0:25,0:13:23.47:0,23,198	0/0:20,1:23:50.25:0,50,551	0/0:19,0:20:42.56:0,43,550	0/0:15,0:18:41.43:0,41,468	0/0:28,0:27:61.84:0,62,707	0/0:19,0:19:48.40:0,48,592	0/1:4,0:21:7.49:7,0,99	0/1:7,0:15:4.68:5,0,126	1/1:4,14:17:30.03:290,30,0	1/1:5,9:14:14.99:145,15,0	0/0:9,0:9:21.01:0,21,263	0/0:9,0:11:20.52:0,21,217	0/0:7,0:8:13.78:0,14,294	0/0:29,0:33:82.71:0,83,1043	0/0:18,0:17:45.15:0,45,642	0/0:19,0:19:48.36:0,48,571	0/0:17,0:18:44.02:0,44,502	0/0:20,0:17:43.03:0,43,600	1/1:3,14:18:29.73:268,30,0	1/1:5,14:20:38.91:409,39,0	1/1:2,15:17:44.81:418,45,0	0/0:4,0:15:27.95:0,28,111	0/0:15,0:14:38.60:0,39,506	0/0:19,0:22:52.63:0,53,643	0/0:13,0:10:27.09:0,27,388
chr10	74121343	.	C	CATGT	1403.66	PASS	AB=0.771;AC=15;AF=0.288;AN=52;BaseQRankSum=0.469;DP=605;FS=0.000;HRun=0;HaplotypeScore=108.2596;InbreedingCoeff=0.5735;MQ=60.07;MQ0=6;MQRankSum=-2.756;QD=6.78;ReadPosRankSum=-0.021;VQSLOD=2.0803;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,17:36:19.29:537,0,19	0/0:6,0:6:15.05:0,15,232	./.	./.	0/0:22,0:24:30.09:0,30,426	0/0:23,0:24:36.10:0,36,518	0/0:18,0:18:12.02:0,12,185	0/0:42,0:40:24.06:0,24,324	1/1:17,0:22:9.03:155,9,0	0/0:28,0:28:48.15:0,48,716	0/0:14,0:16:18.03:0,18,219	1/1:12,0:14:6.02:102,6,0	1/1:12,0:22:18.06:307,18,0	0/0:12,0:12:21.07:0,21,325	0/0:19,0:20:33.11:0,33,491	0/1:26,0:27:19.03:19,0,410	0/0:24,0:24:36.08:0,36,531	0/1:19,15:34:31.55:267,0,32	0/0:27,0:27:33.07:0,33,484	0/0:25,0:27:39.13:0,39,584	0/0:17,0:17:39.10:0,39,577	1/1:7,1:12:5.05:76,5,0	1/1:17,0:18:3.01:53,3,0	1/1:16,0:16:3.01:52,3,0	0/0:17,0:17:24.07:0,24,351	0/0:23,0:22:39.12:0,39,580	0/0:29,0:30:54.18:0,54,812	0/0:17,0:16:18.06:0,18,275
chr10	74121624	.	A	AGTGT	864.24	PASS	AB=0.872;AC=17;AF=0.354;AN=48;BaseQRankSum=0.363;DP=629;FS=0.000;HRun=0;HaplotypeScore=115.2626;InbreedingCoeff=0.4993;MQ=65.12;MQ0=11;MQRankSum=0.248;QD=3.51;ReadPosRankSum=-1.246;VQSLOD=2.1394;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:14.48:133,14,0	0/0:3,0:3:2.98:0,3,21	./.	./.	0/0:20,0:22:24.04:0,24,328	0/1:11,0:15:3.32:16,0,3	0/1:24,0:29:22.77:23,0,55	0/0:27,0:26:1.28:0,1,36	1/1:25,1:24:12:186,12,0	0/0:29,0:28:13.59:0,14,164	0/0:26,0:27:15.04:0,15,212	1/1:14,0:14:3:25,3,0	1/1:14,0:23:4.18:55,4,0	0/0:18,0:19:14.75:0,15,211	0/0:25,0:25:15.49:0,15,211	0/0:22,0:23:5.59:0,6,197	0/0:28,0:29:18.09:0,18,363	1/1:12,0:21:14.66:64,15,0	0/0:19,0:16:5.65:0,6,67	0/0:14,0:14:6.02:0,6,93	0/1:32,0:29:5.96:6,0,152	1/1:14,0:14:3:25,3,0	./.	1/1:22,14:37:20.67:492,21,0	./.	0/0:31,0:30:2.96:0,3,20	0/0:17,0:19:8.70:0,9,115	0/0:8,0:8:8.94:0,9,110
chr10	74121979	.	T	TATAGTAACGA	22856.10	PASS	AB=0.952;AC=23;AF=0.411;AN=56;BaseQRankSum=-9.817;DP=561;FS=11.669;HRun=0;HaplotypeScore=146.2568;InbreedingCoeff=0.9033;MQ=75.26;MQ0=0;MQRankSum=-17.041;QD=110.95;ReadPosRankSum=4.262;VQSLOD=5.1805;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:20:50.39:2534,50,0	0/0:9,0:9:27.09:0,27,943	0/0:18,0:18:51.17:0,51,1543	0/0:25,0:25:66:0,66,1694	0/0:14,0:14:42.12:0,42,1297	0/0:24,0:24:69.22:0,69,2253	0/0:19,0:19:57.16:0,57,1766	0/0:39,0:39:99:0,111,3273	1/1:2,12:18:45.15:2401,45,0	1/1:6,9:18:54.16:2443,54,0	1/1:2,12:14:42.14:2198,42,0	1/1:5,17:28:66.23:3260,66,0	1/1:4,14:20:54.19:2758,54,0	0/0:25,0:25:75.23:0,75,2289	0/0:22,0:22:66.21:0,66,2172	0/1:19,1:20:99:104,0,1839	0/0:18,0:18:54.14:0,54,1601	1/1:0,11:14:33.11:1716,33,0	0/0:35,0:35:99:0,105,3314	0/0:15,0:15:42.14:0,42,1445	0/0:31,0:31:93.30:0,93,3148	1/1:1,7:10:27.09:1282,27,0	1/1:3,6:12:24.08:1094,24,0	1/1:2,8:15:24.08:1215,24,0	1/1:4,10:16:36.12:1852,36,0	0/0:24,0:24:3.67:0,4,2057	0/0:27,0:27:78.27:0,78,2650	0/0:10,0:10:27.07:0,27,815
chr10	74122122	.	CT	C	6089.46	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=17.578;DP=552;FS=2.402;HRun=7;HaplotypeScore=67.2323;InbreedingCoeff=0.9170;MQ=65.47;MQ0=1;MQRankSum=0.138;QD=25.16;ReadPosRankSum=3.802;VQSLOD=5.5605;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:75.17:765,75,0	0/0:10,0:10:30.10:0,30,377	0/0:12,0:12:9.13:0,9,215	0/1:8,0:6:2.64:3,0,64	0/0:28,0:28:75.24:0,75,942	0/0:21,0:21:54.16:0,54,665	0/0:13,0:13:39.08:0,39,473	0/0:25,0:25:69.21:0,69,856	1/1:2,17:19:48.11:489,48,0	1/1:2,24:26:69.15:703,69,0	1/1:1,18:19:54.12:550,54,0	1/1:2,22:24:57.13:581,57,0	1/1:1,25:26:66.15:673,66,0	0/0:15,0:15:45.14:0,45,565	0/0:18,0:18:54.15:0,54,653	0/0:12,1:12:2.52:0,3,347	0/0:18,0:18:51.16:0,51,642	1/1:0,12:12:27.06:275,27,0	0/0:24,0:24:54.16:0,54,667	0/0:27,0:27:78.21:0,78,958	0/0:13,0:13:39.11:0,39,474	1/1:1,16:17:48.11:489,48,0	1/1:1,23:24:57.12:582,57,0	1/1:1,8:9:21.05:214,21,0	1/1:3,26:29:75.17:765,75,0	0/0:24,1:25:44.62:0,45,875	0/0:26,0:25:78.25:0,78,975	0/0:22,0:22:45.14:0,45,565
chr10	74122952	.	G	GT	2111.55	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.541;DP=614;FS=1.015;HRun=7;HaplotypeScore=56.8141;InbreedingCoeff=0.9964;MQ=78.15;MQ0=0;MQRankSum=-0.529;QD=28.93;ReadPosRankSum=2.525;VQSLOD=4.2483;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.14:0,93,892	0/0:14,0:14:36.05:0,36,348	0/0:20,0:21:45.01:0,45,412	0/0:8,0:8:17.44:0,17,133	0/0:30,0:30:87.14:0,87,840	0/0:23,0:23:60.10:0,60,579	0/0:14,0:14:36.06:0,36,348	0/0:31,0:31:84.12:0,84,805	0/0:18,0:18:51.08:0,51,492	1/1:0,21:21:63.14:732,63,0	1/1:1,23:24:60.18:725,60,0	0/0:19,0:19:48.05:0,48,456	0/0:27,0:27:81.06:0,81,757	0/0:23,0:23:66.08:0,66,625	0/0:24,0:24:63.09:0,63,608	0/0:17,0:17:51.08:0,51,493	0/0:33,0:33:93.05:0,93,879	0/0:17,0:17:42.06:0,42,406	0/0:19,0:19:45.07:0,45,434	0/0:35,0:35:99:0,102,985	0/0:17,0:17:48.08:0,48,463	0/0:17,0:17:45.07:0,45,434	0/0:18,0:18:51.08:0,51,492	0/0:21,0:21:59.99:0,60,560	1/1:1,27:28:66.20:797,66,0	0/0:27,1:28:32.86:0,33,601	0/0:21,0:20:54.08:0,54,521	0/0:13,0:13:33.05:0,33,319
chr10	74125707	.	TG	T	5334.70	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=12.380;DP=568;FS=1.086;HRun=9;HaplotypeScore=57.7854;InbreedingCoeff=0.9983;MQ=82.22;MQ0=0;MQRankSum=-1.032;QD=22.41;ReadPosRankSum=5.450;VQSLOD=5.2191;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,40:43:99:906,99,0	0/0:9,0:9:24.07:0,24,276	0/0:21,0:21:45.70:0,46,509	0/0:17,0:14:21.41:0,21,206	0/0:23,0:23:63.17:0,63,716	0/0:25,0:25:66.15:0,66,722	0/0:19,0:19:54.16:0,54,623	0/0:16,0:16:39.09:0,39,431	1/1:2,15:17:42.02:384,42,0	1/1:4,17:21:51.01:467,51,0	1/1:2,18:20:51.03:467,51,0	1/1:0,17:17:48.03:439,48,0	1/1:4,13:17:36:325,36,0	0/0:18,0:18:48.13:0,48,545	0/0:20,0:20:20.83:0,21,475	0/0:21,0:21:54.14:0,54,606	0/0:22,0:22:54.30:0,54,601	1/1:5,14:19:33.01:302,33,0	0/0:24,0:24:63.17:0,63,710	0/0:27,0:27:63.15:0,63,700	0/0:12,0:12:36.09:0,36,404	1/1:1,31:32:87.05:796,87,0	1/1:3,18:21:53.90:481,54,0	1/1:1,13:14:32.99:302,33,0	1/1:0,17:17:51.03:467,51,0	0/0:23,0:23:60.18:0,60,691	0/0:23,0:23:60.15:0,60,673	0/0:10,0:10:27.04:0,27,288
chr10	74126596	.	GTC	G	3130.58	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.671;DP=591;FS=0.936;HRun=0;HaplotypeScore=72.2909;InbreedingCoeff=0.9300;MQ=85.47;MQ0=1;MQRankSum=-2.442;QD=37.27;ReadPosRankSum=2.151;VQSLOD=5.9462;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:96.32:1344,96,0	0/0:11,0:11:33.11:0,33,592	0/0:24,0:24:67.70:0,68,1195	0/0:18,0:18:45.15:0,45,802	0/0:23,0:23:66.21:0,66,1159	0/0:15,0:15:42.14:0,42,748	0/0:44,0:44:99:0,126,2244	0/0:18,0:18:54.17:0,54,922	0/0:21,0:21:57.20:0,57,1019	1/1:1,20:21:63.19:854,63,0	1/1:0,10:10:21.07:294,21,0	0/0:18,0:18:51.17:0,51,917	0/0:21,0:21:60.21:0,60,1068	0/0:17,0:17:51.17:0,51,917	0/0:12,0:12:36.11:0,36,618	0/0:22,0:21:63.20:0,63,1106	0/0:31,0:31:90.31:0,90,1620	0/0:25,0:25:69.22:0,69,1191	0/0:11,0:11:27.09:0,27,480	0/0:16,0:16:48.16:0,48,864	0/0:44,0:44:99:0,126,2201	0/0:16,0:16:48.16:0,48,852	0/0:14,0:14:42.14:0,42,745	0/0:35,0:35:99:0,102,1816	1/1:0,19:19:57.19:797,57,0	0/0:13,1:14:0.12:0,0,661	0/0:24,0:24:69.24:0,69,1241	0/0:13,0:13:39.11:0,39,644
chr10	74127178	.	AC	A	736.32	PASS	AB=0.908;AC=15;AF=0.268;AN=56;BaseQRankSum=2.082;DP=434;FS=0.000;HRun=11;HaplotypeScore=59.5820;InbreedingCoeff=0.1643;MQ=72.03;MQ0=1;MQRankSum=0.017;QD=4.09;ReadPosRankSum=4.322;VQSLOD=-0.2274;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:40.25:0,40,575	0/0:9,0:9:8.98:0,9,74	0/0:14,0:13:11.82:0,12,91	0/1:10,0:9:22:33,0,22	0/1:16,1:17:18.33:18,0,188	0/0:22,0:22:41.05:0,41,384	0/0:23,0:23:28.64:0,29,403	0/1:15,2:17:17.77:39,0,18	0/1:8,1:9:0.66:1,0,166	1/1:9,8:18:31.96:248,32,0	1/1:1,7:8:8.78:74,9,0	0/1:15,2:17:5.24:5,0,114	0/0:15,0:15:12.09:0,12,297	0/0:17,0:17:27.03:0,27,265	0/0:10,0:15:14.82:0,15,123	0/0:2,0:8:8.69:0,9,60	0/0:13,0:14:27.51:0,28,184	0/1:10,11:21:20.14:208,0,20	0/0:12,0:12:6.02:0,6,64	0/1:14,0:14:6.34:6,0,133	0/0:22,0:22:26.93:0,27,255	0/0:14,1:15:3.62:0,4,206	0/1:15,0:15:2.23:2,0,128	0/1:13,2:14:21.95:22,0,182	1/1:10,7:19:31.85:239,32,0	0/0:8,0:8:9.01:0,9,88	0/0:19,1:20:14.40:0,14,327	0/0:3,0:3:3.01:0,3,32
chr10	74128484	.	A	AT	1573.07	PASS	AB=0.721;AC=12;AF=0.214;AN=56;BaseQRankSum=-8.469;DP=343;FS=0.904;HRun=9;HaplotypeScore=37.2484;InbreedingCoeff=0.7819;MQ=80.61;MQ0=0;MQRankSum=-1.603;QD=19.18;ReadPosRankSum=2.420;VQSLOD=3.5475;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:76.01:0,76,715	0/0:1,0:1:3:0,3,26	0/0:13,0:12:20.85:0,21,170	0/0:14,0:13:29.99:0,30,258	0/0:11,0:11:32.99:0,33,287	0/1:9,1:10:3.18:3,0,204	0/0:14,0:14:38.97:0,39,334	0/0:12,0:12:35.99:0,36,312	1/1:1,10:11:22.30:235,22,0	0/0:10,0:10:29.99:0,30,260	0/0:10,0:10:23.99:0,24,208	1/1:1,17:18:42.11:465,42,0	0/1:1,7:8:11.01:118,0,11	0/0:5,0:5:11.99:0,12,104	0/0:9,0:9:26.99:0,27,234	0/0:15,0:15:44.99:0,45,390	0/0:13,0:13:38.99:0,39,339	0/0:12,0:12:35.99:0,36,312	0/0:15,0:15:26.96:0,27,234	0/0:14,0:14:38.95:0,39,331	0/0:21,0:21:62.97:0,63,543	1/1:0,7:7:18.05:199,18,0	1/1:1,10:11:21.06:232,21,0	1/1:0,17:17:45.12:498,45,0	0/0:9,0:9:26.99:0,27,234	0/0:12,0:12:32.98:0,33,286	0/0:15,0:15:35.05:0,35,351	0/0:5,0:5:14.93:0,15,114
chr10	74128653	.	AT	A	4189.92	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=12.890;DP=467;FS=20.120;HRun=9;HaplotypeScore=44.7638;InbreedingCoeff=0.9798;MQ=77.78;MQ0=0;MQRankSum=-1.006;QD=23.15;ReadPosRankSum=2.443;VQSLOD=2.2703;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,32:36:81.04:741,81,0	0/0:6,0:6:15.04:0,15,173	0/0:17,0:16:30:0,30,309	0/0:9,0:6:8.86:0,9,83	0/0:8,0:8:15.04:0,15,173	0/0:17,0:17:48.13:0,48,545	0/0:11,0:11:27.08:0,27,312	0/0:42,0:42:80.85:0,81,1162	1/1:2,18:20:48.02:439,48,0	1/1:0,14:14:41.98:374,42,0	1/1:1,16:17:48.03:439,48,0	1/1:2,25:27:60.03:549,60,0	1/1:0,11:11:33.02:302,33,0	0/0:12,1:13:11.65:0,12,387	0/0:16,0:16:45.13:0,45,519	0/0:21,1:22:35.72:0,36,665	0/0:23,0:23:69.20:0,69,796	1/1:1,7:8:18.01:165,18,0	0/0:23,0:23:69.10:0,69,774	0/0:15,0:15:45.09:0,45,496	0/0:10,0:10:27.08:0,27,312	1/1:1,8:9:24.01:220,24,0	1/1:0,9:9:24.01:220,24,0	1/1:0,17:17:51.03:467,51,0	1/1:1,12:13:30.01:275,30,0	0/0:25,0:26:62.34:0,62,756	0/0:16,0:16:42.11:0,42,475	0/0:12,0:12:33.06:0,33,351
chr10	74130000	.	A	ACCCGCTCGATC	23013.83	PASS	AB=0.700;AC=55;AF=0.982;AN=56;BaseQRankSum=-5.803;DP=332;FS=13.832;HRun=0;HaplotypeScore=369.0888;InbreedingCoeff=-0.0393;MQ=57.19;MQ0=0;MQRankSum=0.470;QD=69.32;ReadPosRankSum=-2.582;VQSLOD=3.3128;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:33.11:1072,33,0	1/1:7,0:7:12.98:402,13,0	1/1:2,1:6:18.06:735,18,0	0/1:4,0:7:23.26:510,0,23	1/1:10,0:10:15.40:421,15,0	1/1:19,0:19:25.50:1426,25,0	1/1:14,0:14:38.93:1206,39,0	1/1:12,0:12:33.11:1217,33,0	1/1:15,0:15:27.98:995,28,0	1/1:10,0:10:20.72:768,21,0	1/1:8,0:8:14.93:352,15,0	1/1:12,0:12:1.77:819,2,0	1/1:18,0:18:29.10:1011,29,0	1/1:23,0:23:45.37:1519,45,0	1/1:16,0:16:30.73:1094,31,0	1/1:12,0:12:26.25:1017,26,0	1/1:14,0:14:25.10:855,25,0	1/1:9,0:9:6.52:639,7,0	1/1:9,0:9:16.09:493,16,0	1/1:6,0:6:15.05:409,15,0	1/1:5,0:5:9.03:234,9,0	1/1:18,0:18:19.17:909,19,0	1/1:7,0:7:11.98:187,12,0	1/1:10,0:10:9.03:320,9,0	1/1:6,0:6:15.05:510,15,0	1/1:16,0:16:43.46:1819,43,0	1/1:18,0:18:32.04:1387,32,0	1/1:9,0:9:18.06:688,18,0
chr10	74132971	.	T	TA	121.94	PASS	AB=0.588;AC=1;AF=0.018;AN=56;BaseQRankSum=-2.532;DP=702;FS=5.745;HRun=7;HaplotypeScore=66.7812;InbreedingCoeff=0.2162;MQ=73.14;MQ0=0;MQRankSum=-0.495;QD=12.19;ReadPosRankSum=-1.531;VQSLOD=2.3130;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,980	0/0:10,0:10:27.04:0,27,261	0/0:13,0:13:22.76:0,23,209	0/0:11,0:11:12.95:0,13,119	0/0:31,0:31:90.12:0,90,858	0/0:19,0:19:48.07:0,48,464	0/0:22,0:22:63.08:0,63,602	0/0:21,0:21:54.08:0,54,521	0/0:31,0:31:81.10:0,81,767	0/0:33,0:33:81.12:0,81,781	0/0:18,0:18:42.06:0,42,406	0/0:39,0:39:99:0,102,985	0/0:26,2:28:35.82:0,36,616	0/0:27,0:27:78.12:0,78,753	0/0:32,0:32:84.13:0,84,811	0/0:26,0:26:57.07:0,57,550	0/0:28,0:28:78.12:0,78,753	0/1:3,7:10:7.91:196,0,8	0/0:17,0:17:42.06:0,42,402	0/0:40,0:40:99:0,114,1083	0/0:36,0:37:98.18:0,98,933	0/0:25,0:25:54.05:0,54,512	0/0:31,0:31:84.13:0,84,811	0/0:17,0:17:51.08:0,51,493	0/0:25,0:25:63.10:0,63,608	0/0:23,0:23:60.09:0,60,579	0/0:34,0:34:87.12:0,87,834	0/0:18,0:18:48.07:0,48,463
chr10	74133122	.	A	AAC	8634.61	PASS	AB=0.600;AC=13;AF=0.232;AN=56;BaseQRankSum=-13.031;DP=1069;FS=1.334;HRun=0;HaplotypeScore=159.1029;InbreedingCoeff=0.8885;MQ=65.60;MQ0=2;MQRankSum=0.309;QD=30.19;ReadPosRankSum=2.371;VQSLOD=6.6078;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:66.17:0,66,785	0/0:15,0:15:36.09:0,36,424	0/0:40,0:29:34.27:0,34,360	0/0:53,0:44:47.28:0,47,680	0/0:35,1:36:81.19:0,81,934	0/0:30,0:30:61.64:0,62,739	0/0:36,0:39:82.20:0,82,888	0/0:49,0:49:73.09:0,73,1013	1/1:9,35:43:87.30:1383,87,0	0/0:45,0:46:99:0,102,1195	0/0:37,0:38:87.09:0,87,1024	1/1:13,43:57:74.97:1695,75,0	1/1:9,37:47:99:1644,102,0	0/0:27,1:28:11.78:0,12,643	0/0:47,0:47:87.10:0,87,1033	0/0:53,1:54:77.90:0,78,1425	0/0:25,0:25:63.15:0,63,737	1/1:6,15:20:25.01:516,25,0	0/0:16,0:15:33.10:0,33,400	0/0:38,0:39:96.29:0,96,1165	0/0:56,1:57:80.96:0,81,1468	1/1:10,36:46:26.24:1417,26,0	1/1:5,26:31:5.45:1078,5,0	0/1:13,25:38:6.59:902,0,7	0/0:22,0:24:65.87:0,66,756	0/0:34,0:38:98.63:0,99,1112	0/0:32,1:33:23.93:0,24,775	0/0:19,0:20:47.96:0,48,547
chr10	74133585	.	TA	T	245.83	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.233;DP=760;FS=0.000;HRun=6;HaplotypeScore=83.3344;InbreedingCoeff=0.9985;MQ=67.54;MQ0=0;MQRankSum=-0.644;QD=18.91;ReadPosRankSum=0.641;VQSLOD=3.1176;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:87.15:0,87,1111	0/0:15,0:15:45.15:0,45,615	0/0:11,0:11:30.10:0,30,392	0/0:19,0:19:30.07:0,30,384	0/0:38,0:38:99:0,105,1411	0/0:22,0:22:63.20:0,63,846	0/0:22,0:22:63.21:0,63,861	0/0:42,0:42:99:0,109,1545	0/0:30,0:30:85.52:0,86,1150	0/0:43,0:43:99:0,117,1599	0/0:23,0:23:69.17:0,69,901	0/0:34,0:34:87.29:0,87,1189	0/0:29,0:29:81.27:0,81,1106	0/0:28,0:28:72.23:0,72,970	0/0:39,0:39:99:0,105,1435	0/0:24,0:24:63.21:0,63,861	0/0:19,0:18:51.16:0,51,680	1/1:1,12:13:30.09:340,30,0	0/0:22,0:22:60.20:0,60,821	0/0:32,0:32:90.30:0,90,1227	0/0:22,0:22:57.19:0,57,780	0/0:35,0:35:96.28:0,96,1291	0/0:27,0:27:78.25:0,78,1050	0/0:20,0:20:57.15:0,57,730	0/0:31,0:31:84.25:0,84,1115	0/0:43,0:43:99:0,123,1665	0/0:22,0:22:66.22:0,66,902	0/0:23,0:23:69.23:0,69,944
chr10	74134125	.	AGTGTGTGTGT	A	998.42	PASS	AC=12;AF=0.250;AN=48;BaseQRankSum=5.867;DP=623;FS=3.712;HRun=0;HaplotypeScore=166.5731;InbreedingCoeff=0.7770;MQ=55.85;MQ0=13;MQRankSum=-4.267;QD=7.74;ReadPosRankSum=-0.581;VQSLOD=2.3496;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:9,0:9:13.86:0,14,461	0/0:33,0:20:0.89:0,1,2	./.	0/0:23,0:23:21.07:0,21,620	0/0:16,0:16:24.08:0,24,864	0/0:32,0:31:25.43:0,25,652	0/0:20,0:20:24.02:0,24,409	./.	1/1:20,0:19:17.58:316,18,0	0/0:5,0:12:0.47:0,0,1	1/1:7,14:22:6.02:170,6,0	1/1:10,14:24:11.73:336,12,0	0/0:25,0:25:51.15:0,51,1827	0/0:19,0:19:27.56:0,28,989	0/0:29,0:29:55.11:0,55,1856	0/0:32,0:32:58.04:0,58,1868	1/1:23,0:23:9.03:242,9,0	0/0:14,0:15:15.04:0,15,371	0/0:19,0:18:17.67:0,18,417	0/0:35,0:29:39.13:0,39,1238	0/0:8,6:13:0.47:0,0,1	1/1:7,6:12:2.65:38,3,0	1/1:13,10:26:2.67:46,3,0	./.	0/0:24,0:23:48.13:0,48,1355	0/0:20,0:20:33.58:0,34,1206	0/0:18,0:15:22.29:0,22,669
chr10	74134143	.	TGTGTGTGTGTGTGTGTGA	T	902.57	PASS	AB=0.867;AC=7;AF=0.130;AN=54;BaseQRankSum=5.888;DP=545;FS=2.067;HRun=0;HaplotypeScore=188.0237;InbreedingCoeff=0.2767;MQ=48.17;MQ0=21;MQRankSum=-3.111;QD=10.37;ReadPosRankSum=1.769;VQSLOD=2.1400;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:16:3:0,3,42	0/0:11,0:10:17.27:0,17,842	0/0:6,0:3:4.26:0,4,45	./.	0/0:21,0:21:27.56:0,28,1229	0/0:17,0:17:27.09:0,27,1609	0/0:34,0:31:49.44:0,49,1644	0/0:13,0:13:36:0,36,1103	0/0:18,0:19:12.93:0,13,202	0/1:4,8:11:15.58:654,0,16	1/1:12,0:12:2.58:69,3,0	1/1:19,0:18:6.02:67,6,0	0/1:21,0:21:92.52:93,0,116	0/0:26,0:25:54.02:0,54,3151	0/0:22,0:22:44.14:0,44,2017	0/0:29,0:29:65.78:0,66,3475	0/0:26,0:26:61.44:0,61,3288	0/1:23,0:22:45.21:143,0,45	0/0:14,0:13:36.08:0,36,1126	0/0:18,0:16:19.78:0,20,920	0/0:35,0:28:54.60:0,55,2544	0/0:12,0:11:6.49:0,6,139	0/0:14,0:13:11.12:0,11,114	0/0:28,0:28:21.03:0,21,380	0/0:23,0:22:2.54:0,3,15	0/0:22,0:21:60.10:0,60,2640	0/0:16,0:15:40.02:0,40,2150	0/0:15,0:12:24.08:0,24,1228
chr10	74134149	.	TGTGTGTGTGTGAGAGAGAGAGAGAGAGAGA	T	1095.78	PASS	AB=1.000;AC=6;AF=0.111;AN=54;BaseQRankSum=5.846;DP=537;FS=2.283;HRun=0;HaplotypeScore=265.1940;InbreedingCoeff=0.4370;MQ=46.96;MQ0=22;MQRankSum=-5.149;QD=13.70;ReadPosRankSum=1.464;VQSLOD=2.1599;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:5.79:0,6,538	0/0:12,0:11:14.54:0,15,723	0/0:2,0:1:0:0,0,0	./.	0/0:20,0:20:24.55:0,25,1367	0/0:18,0:18:30.10:0,30,1953	0/0:34,0:31:43.97:0,44,2259	0/0:13,0:13:39.03:0,39,721	0/0:19,0:19:12.04:0,12,1051	0/1:11,0:10:99:235,0,603	0/0:11,0:11:3.01:0,3,182	1/1:22,0:20:5.10:168,5,0	0/1:24,0:23:99:272,0,981	0/0:25,0:24:50.18:0,50,2909	0/0:22,0:22:43.50:0,44,2585	0/0:29,0:29:69.36:0,69,4524	0/0:27,0:27:64.06:0,64,3489	1/1:6,17:22:12.04:543,12,0	0/0:12,0:11:33.09:0,33,1426	0/0:21,0:19:21.08:0,21,1234	0/0:34,0:27:51.18:0,51,3250	0/0:12,0:11:6.02:0,6,548	0/0:14,0:13:15.52:0,16,1154	0/0:26,0:26:12.48:0,12,892	0/0:21,0:20:6.02:0,6,454	0/0:21,0:20:54.15:0,54,3046	0/0:18,0:17:42.62:0,43,2325	0/0:15,0:12:24.13:0,24,1269
chr10	74135800	.	GCCT	G	1046.70	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.547;DP=531;FS=0.000;HRun=0;HaplotypeScore=75.3733;InbreedingCoeff=0.8490;MQ=76.82;MQ0=0;MQRankSum=-1.543;QD=28.29;ReadPosRankSum=1.659;VQSLOD=3.2476;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:72.25:1141,72,0	0/0:8,0:8:24.08:0,24,523	0/0:9,0:9:20.89:0,21,317	0/0:12,0:13:30.54:0,31,537	0/0:10,0:10:27.09:0,27,590	0/0:11,0:11:30.10:0,30,656	0/0:36,0:36:93.32:0,93,2005	0/0:20,0:20:54.19:0,54,1155	0/0:22,0:22:66.23:0,66,1421	0/0:15,0:15:45.15:0,45,955	0/0:2,0:2:6.02:0,6,131	0/0:22,0:22:63.20:0,63,1310	0/0:20,0:20:60.21:0,60,1312	0/0:23,0:23:66.23:0,66,1437	0/0:19,0:19:45.15:0,45,966	0/0:10,0:10:30.10:0,30,656	0/0:42,0:42:99:0,117,2523	0/0:23,0:23:63.22:0,63,1312	0/0:14,0:14:33.11:0,33,702	0/0:3,0:3:9.03:0,9,195	0/0:58,0:58:99:0,169,3547	0/0:14,0:14:42.14:0,42,918	0/0:11,0:11:27.09:0,27,584	0/0:38,0:38:99:0,105,2273	0/0:15,0:15:45.13:0,45,928	0/0:14,0:14:42.14:0,42,888	0/0:15,0:14:45.15:0,45,971	0/0:7,0:7:21.07:0,21,458
chr10	74136894	.	G	GAA	8538.22	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-9.660;DP=624;FS=0.326;HRun=7;HaplotypeScore=79.4670;InbreedingCoeff=0.9985;MQ=84.96;MQ0=5;MQRankSum=-3.203;QD=34.71;ReadPosRankSum=5.054;VQSLOD=4.6471;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:38:99:1721,105,0	0/0:6,0:6:18.05:0,18,209	0/0:29,0:27:57.82:0,58,577	0/0:29,0:25:35.60:0,36,386	0/0:25,0:25:63.17:0,63,732	0/0:13,0:13:39.12:0,39,454	0/0:28,0:28:81.24:0,81,943	0/0:21,0:21:51.14:0,51,594	1/1:2,18:21:54.18:880,54,0	1/1:4,16:20:45.15:713,45,0	1/1:2,13:15:36.12:590,36,0	1/1:2,19:21:48.16:787,48,0	1/1:0,14:15:26.58:402,27,0	0/0:22,0:22:60.16:0,60,689	0/0:17,0:17:39.11:0,39,455	0/0:12,0:12:30.07:0,30,339	0/0:22,0:22:60.18:0,60,699	1/1:4,0:31:59.51:210,60,0	0/0:35,0:35:93.27:0,93,1083	0/0:18,0:18:51.14:0,51,594	0/0:23,0:23:63.18:0,63,733	1/1:4,15:18:42.10:659,42,0	1/1:5,22:26:60.20:952,60,0	1/1:0,23:23:63.22:1033,63,0	1/1:3,12:15:36.12:590,36,0	0/0:27,0:27:69.19:0,69,804	0/0:31,0:31:78.22:0,78,908	0/0:19,0:19:57.17:0,57,664
chr10	74137045	.	C	CAGAATG	965.96	PASS	AB=0.641;AC=1;AF=0.018;AN=56;BaseQRankSum=-2.295;DP=638;FS=1.079;HRun=0;HaplotypeScore=124.9148;InbreedingCoeff=-0.0193;MQ=81.63;MQ0=0;MQRankSum=-5.821;QD=38.64;ReadPosRankSum=-0.321;VQSLOD=3.5866;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.28:0,81,1796	0/0:5,0:5:12.04:0,12,266	0/0:21,0:21:42.14:0,42,894	0/0:24,0:23:51.17:0,51,1101	0/0:34,0:34:90.31:0,90,1962	0/0:23,0:23:69.24:0,69,1530	0/0:16,0:16:42.14:0,42,932	0/0:30,0:30:69.23:0,69,1475	0/0:25,0:25:72.22:0,72,1514	0/0:28,0:28:75.26:0,75,1623	0/0:18,0:18:48.16:0,48,1034	0/0:16,0:16:48.16:0,48,1033	0/0:17,0:17:48.16:0,48,1047	0/0:23,0:23:63.22:0,63,1368	0/0:24,0:24:69.24:0,69,1494	0/0:16,0:16:33.11:0,33,732	0/0:30,0:30:81.26:0,81,1703	0/1:11,13:25:72.34:1040,0,72	0/0:20,0:20:46.31:0,46,803	0/0:33,0:33:93.32:0,93,2018	0/0:16,0:16:45.15:0,45,996	0/0:15,0:15:45.15:0,45,984	0/0:18,0:18:48.16:0,48,1064	0/0:34,0:34:87.30:0,87,1859	0/0:29,0:29:81.27:0,81,1755	0/0:18,0:18:42.14:0,42,893	0/0:33,0:33:84.29:0,84,1847	0/0:17,0:17:42.14:0,42,853
chr10	74137607	.	GA	G	3624.88	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.110;DP=690;FS=20.835;HRun=11;HaplotypeScore=77.3580;InbreedingCoeff=0.9957;MQ=74.87;MQ0=0;MQRankSum=-0.211;QD=20.60;ReadPosRankSum=6.306;VQSLOD=2.7889;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,2:34:29.69:0,30,660	0/0:11,0:11:24.06:0,24,256	0/0:15,0:16:23.61:0,24,235	0/0:13,0:12:14.82:0,15,134	0/0:30,0:31:78.51:0,79,795	0/0:21,0:21:60.15:0,60,639	0/0:17,0:19:48.23:0,48,465	0/0:32,0:32:44.55:0,45,673	1/1:3,21:24:59.93:492,60,0	0/0:24,1:27:44.34:0,44,633	0/0:17,0:18:46.34:0,46,470	1/1:3,22:25:62.91:517,63,0	1/1:7,30:37:89.86:739,90,0	0/0:18,0:21:44.93:0,45,449	0/0:46,0:46:99:0,102,1247	0/0:34,0:34:88.01:0,88,883	0/0:22,0:22:60.15:0,60,640	1/1:1,10:12:32:252,32,0	0/0:19,0:21:53.99:0,54,550	0/0:33,0:37:89.83:0,90,887	0/0:25,0:27:62.98:0,63,647	1/1:3,24:27:65.90:541,66,0	1/1:3,21:24:56.93:468,57,0	1/1:2,25:27:74.90:615,75,0	0/0:15,0:15:45.09:0,45,460	0/0:20,2:22:26.46:0,26,470	0/0:33,1:33:74.48:0,74,940	0/0:13,0:13:30.06:0,30,313
chr10	74138119	.	TAA	T	2826.20	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.303;DP=538;FS=5.026;HRun=11;HaplotypeScore=77.0319;InbreedingCoeff=0.9864;MQ=74.01;MQ0=1;MQRankSum=0.938;QD=22.79;ReadPosRankSum=3.867;VQSLOD=3.4341;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:27:68.61:299,69,0	0/0:10,0:10:24.08:0,24,369	0/0:24,0:13:18.04:0,18,234	0/0:17,0:12:14.60:0,15,137	0/0:20,0:21:59.67:0,60,846	0/0:21,0:21:60.20:0,60,903	0/0:18,0:18:54.17:0,54,803	0/0:30,0:30:78.26:0,78,1175	0/0:4,0:13:22.93:0,23,88	1/1:5,26:31:71.24:755,71,0	1/1:0,22:22:66.17:702,66,0	0/0:2,0:15:27.32:0,27,94	0/0:5,0:14:20.46:0,20,85	0/0:6,0:6:15.05:0,15,231	0/0:13,0:13:30.10:0,30,460	0/0:19,0:19:48.15:0,48,718	0/0:15,0:15:36.12:0,36,551	1/1:2,15:17:45.11:479,45,0	0/0:13,0:13:30.10:0,30,458	0/0:23,0:23:63.19:0,63,929	0/0:11,0:11:30.10:0,30,461	0/0:3,0:23:46.95:0,47,160	0/0:3,0:23:42.42:0,42,145	0/0:1,0:12:19.96:0,20,68	1/1:3,24:27:72.17:766,72,0	0/0:24,0:24:57.19:0,57,858	0/0:29,0:29:81.24:0,81,1192	0/0:19,0:20:55.95:0,56,809
chr10	74141589	.	CTCTGTGTGTGTGTGTGTGTGTGTG	C	1061.10	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-1.268;DP=570;FS=0.000;HRun=0;HaplotypeScore=284.0747;InbreedingCoeff=0.9215;MQ=65.23;MQ0=24;MQRankSum=1.065;QD=13.43;ReadPosRankSum=-2.152;VQSLOD=1.8925;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:3.01:198,3,0	0/0:10,0:8:17.99:0,18,388	0/0:33,0:12:7.21:0,7,123	0/0:41,0:15:20.33:0,20,136	0/0:12,0:12:32.97:0,33,485	0/0:15,0:16:44.96:0,45,955	0/0:30,0:29:80.98:0,81,1431	0/0:18,0:17:43.25:0,43,462	0/0:20,0:19:35.98:0,36,404	1/1:18,0:23:59.73:526,60,0	1/1:11,0:11:26.93:214,27,0	0/0:19,0:19:47.97:0,48,703	0/0:18,0:18:47.90:0,48,833	0/0:19,0:18:50.03:0,50,1783	0/0:19,0:19:48.01:0,48,1543	0/0:17,0:17:46.59:0,47,1308	0/0:33,0:33:82.85:0,83,2281	0/0:27,0:26:74.94:0,75,1414	0/0:13,0:13:38.68:0,39,554	0/0:14,0:14:38.81:0,39,919	0/0:34,0:31:74.89:0,75,1858	0/0:17,0:17:36.01:0,36,530	0/0:11,0:11:23.94:0,24,271	0/0:28,0:26:45.06:0,45,1117	1/1:17,0:17:32.96:274,33,0	0/0:20,0:19:57.03:0,57,2173	0/0:11,0:12:34.87:0,35,907	0/0:10,0:8:23.98:0,24,720
chr10	74141591	.	CTGTGTGTGTGTGTGTG	C	286.04	PASS	AB=0.941;AC=9;AF=0.237;AN=38;BaseQRankSum=3.102;DP=591;FS=29.493;HRun=0;HaplotypeScore=208.9154;InbreedingCoeff=0.4185;MQ=62.94;MQ0=32;MQRankSum=-1.551;QD=2.58;ReadPosRankSum=1.457;VQSLOD=0.9767;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:3.01:111,3,0	0/0:11,0:9:3.01:0,3,145	./.	./.	0/0:13,0:13:3.01:0,3,118	0/0:15,0:15:9.03:0,9,232	0/0:32,0:31:13.40:0,13,289	0/0:20,0:19:3.94:0,4,11	1/1:16,3:18:3.01:85,3,0	./.	./.	1/1:18,0:19:6.01:83,6,0	./.	0/0:20,0:19:18.06:0,18,625	0/0:16,0:17:15.05:0,15,614	0/1:15,1:16:99:115,0,398	0/0:35,0:36:27.05:0,27,856	1/1:27,0:26:0.08:0,0,0	0/0:17,0:16:5.45:0,5,122	0/0:14,0:14:6.02:0,6,211	0/0:39,0:35:15:0,15,650	./.	./.	./.	./.	0/0:22,0:20:22.89:0,23,951	0/0:12,0:12:11.07:0,11,368	0/0:12,0:9:8.06:0,8,269
chr10	74143386	.	GT	G	2987.52	PASS	AB=0.812;AC=21;AF=0.375;AN=56;BaseQRankSum=10.960;DP=647;FS=4.074;HRun=12;HaplotypeScore=73.1545;InbreedingCoeff=0.7227;MQ=68.63;MQ0=0;MQRankSum=0.837;QD=11.15;ReadPosRankSum=3.040;VQSLOD=3.5495;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,23:30:64.46:492,64,0	0/0:8,0:8:15.03:0,15,152	0/0:27,0:19:0.61:0,1,91	0/0:17,0:10:7.46:0,7,50	0/0:32,0:33:78.10:0,78,763	0/0:14,2:17:1.29:0,1,348	0/0:19,1:21:27.70:0,28,447	0/1:26,3:29:5.72:6,0,481	1/1:6,8:14:28.69:214,29,0	1/1:5,16:22:50.67:373,51,0	1/1:4,17:23:51.87:382,52,0	1/1:3,14:17:41.83:325,42,0	1/1:8,15:24:45.76:327,46,0	0/0:19,1:20:30.81:0,31,469	0/0:27,0:28:68.94:0,69,668	0/0:18,0:18:42.08:0,42,426	0/1:33,5:38:13.91:14,0,769	0/0:33,2:35:49.67:0,50,850	0/0:26,2:29:36.72:0,37,538	0/0:25,2:28:23.08:0,23,541	0/0:22,0:24:44.08:0,44,459	1/1:5,11:17:34.70:261,35,0	1/1:6,17:23:23.37:364,23,0	1/1:2,8:11:25.94:190,26,0	0/1:9,11:20:7.93:247,0,8	0/0:26,0:28:60.41:0,60,584	0/0:22,1:23:37.54:0,38,530	0/0:21,0:21:57.10:0,57,571
chr10	74144766	.	CTGTGTGTGTGTGTGTGTGTGTGTG	C	536.22	PASS	AB=0.733;AC=3;AF=0.056;AN=54;BaseQRankSum=3.270;DP=465;FS=8.106;HRun=0;HaplotypeScore=217.2204;InbreedingCoeff=0.3305;MQ=44.63;MQ0=24;MQRankSum=-4.424;QD=23.31;ReadPosRankSum=-1.991;VQSLOD=1.3442;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:12:18.06:0,18,581	0/0:10,0:10:11.06:0,11,1085	0/0:8,0:5:15.05:0,15,1103	0/0:9,0:6:18.06:0,18,1548	0/0:19,0:18:20.16:0,20,1879	0/0:26,0:26:56.87:0,57,4502	0/0:25,0:24:33.45:0,33,2113	0/0:22,0:20:42.14:0,42,2367	1/1:6,6:11:3.01:178,3,0	0/0:21,0:19:30.10:0,30,2715	0/0:13,0:13:14.28:0,14,1507	0/0:7,1:7:8.99:0,9,82	0/1:7,2:11:99:449,0,108	0/0:17,0:17:30.10:0,30,3008	0/0:22,0:21:54.12:0,54,5125	0/0:26,0:25:46.51:0,47,4032	0/0:33,0:31:72.12:0,72,5598	0/0:12,0:12:24.08:0,24,2055	0/0:16,0:13:36.12:0,36,2716	0/0:15,0:15:20.29:0,20,1760	0/0:32,0:30:44.82:0,45,3366	./.	0/0:5,2:9:2.94:0,3,18	0/0:10,0:12:3.37:0,3,17	0/0:16,0:14:21.07:0,21,2156	0/0:17,0:16:33.05:0,33,2622	0/0:15,0:15:35.46:0,35,2575	0/0:13,0:12:36.12:0,36,3399
chr10	74146966	.	A	AC	448.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.935;DP=502;FS=3.416;HRun=7;HaplotypeScore=52.2381;InbreedingCoeff=0.7690;MQ=71.94;MQ0=0;MQRankSum=-0.117;QD=23.63;ReadPosRankSum=2.224;VQSLOD=3.7800;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:69.06:0,69,654	0/0:5,0:5:15.02:0,15,145	0/0:10,0:10:23.93:0,24,217	0/0:10,0:10:5.37:0,5,110	0/0:21,0:21:51.07:0,51,487	0/0:18,0:18:48.03:0,48,446	0/0:30,0:30:67.62:0,68,630	0/0:17,0:17:27.03:0,27,260	0/0:18,0:18:42.06:0,42,405	0/0:13,0:13:30.03:0,30,284	0/0:7,0:7:15.01:0,15,139	0/0:26,0:26:66.06:0,66,628	0/0:6,0:6:15.02:0,15,145	0/0:24,0:24:63.10:0,63,606	0/0:13,0:13:39.06:0,39,376	0/0:20,0:20:54.08:0,54,521	0/0:19,0:19:48.07:0,48,463	1/1:3,16:19:45.14:544,45,0	0/0:25,0:25:51.06:0,51,488	0/0:11,0:11:33.05:0,33,318	0/0:45,0:45:99:0,117,1109	0/0:15,0:15:27.04:0,27,260	0/0:10,0:10:30.05:0,30,288	0/0:26,0:26:72.11:0,72,695	0/0:19,0:19:48.07:0,48,461	0/0:23,0:23:48.07:0,48,463	0/0:17,0:17:45.07:0,45,434	0/0:1,0:2:5.04:0,5,35
chr10	74149539	.	A	ATG	2016.45	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.904;DP=510;FS=6.880;HRun=0;HaplotypeScore=62.2933;InbreedingCoeff=0.9572;MQ=65.48;MQ0=2;MQRankSum=-0.836;QD=28.01;ReadPosRankSum=2.456;VQSLOD=4.7492;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:70.97:0,71,853	0/0:4,0:4:9.03:0,9,119	0/0:8,0:8:14.01:0,14,168	0/0:8,0:7:15:0,15,164	0/0:21,0:21:57.15:0,57,722	0/0:22,0:22:57.17:0,57,741	0/0:11,0:11:33.05:0,33,377	0/0:50,0:50:99:0,135,1589	0/0:13,0:13:39.08:0,39,470	1/1:4,23:26:63.12:927,63,0	1/1:4,15:19:30.10:518,30,0	0/0:14,0:14:42.11:0,42,527	0/0:8,0:8:18.06:0,18,239	0/0:14,0:14:36.06:0,36,415	0/0:10,0:10:24.03:0,24,259	0/0:17,0:17:33.07:0,33,393	0/0:37,0:37:71.08:0,71,1127	0/0:16,0:16:42:0,42,482	0/0:17,0:16:42.03:0,42,464	0/0:18,0:18:45.09:0,45,534	0/0:16,0:16:39.11:0,39,502	0/0:5,0:5:15.03:0,15,182	0/0:18,0:18:42.07:0,42,507	0/0:9,0:9:24.06:0,24,300	1/1:3,23:26:32.09:713,32,0	0/0:26,0:26:69.18:0,69,847	0/0:22,0:22:57.10:0,57,675	0/0:17,0:17:48.10:0,48,585
chr10	74151039	.	C	CT	2950.11	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.205;DP=698;FS=1.583;HRun=1;HaplotypeScore=66.4942;InbreedingCoeff=0.9974;MQ=79.71;MQ0=1;MQRankSum=-1.113;QD=44.03;ReadPosRankSum=1.319;VQSLOD=3.7197;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1637	0/0:11,0:11:27.09:0,27,378	0/0:12,0:12:34.92:0,35,435	0/0:28,0:27:75.23:0,75,984	0/0:16,0:16:48.16:0,48,667	0/0:24,0:23:66.19:0,66,888	0/0:28,0:28:84.28:0,84,1175	0/0:27,0:27:75.23:0,75,1028	0/0:23,0:23:69.23:0,69,965	1/1:0,23:23:69.22:1078,69,0	1/1:0,13:13:39.13:624,39,0	0/0:30,0:30:90.30:0,90,1256	0/0:23,0:23:69.23:0,69,961	0/0:37,0:37:99:0,108,1455	0/0:28,0:28:84.28:0,84,1175	0/0:27,0:27:81.27:0,81,1133	0/0:29,0:29:87.25:0,87,1178	0/0:35,0:35:96.32:0,96,1343	0/0:20,0:20:60.20:0,60,836	0/0:13,0:13:39.13:0,39,545	0/0:53,0:53:99:0,151,2090	0/0:8,0:8:24.08:0,24,336	0/0:21,0:21:63.21:0,63,876	0/0:42,0:42:99:0,123,1664	1/1:1,30:31:87.30:1391,87,0	0/0:18,0:18:54.18:0,54,756	0/0:31,0:31:93.31:0,93,1293	0/0:7,0:7:21.07:0,21,294
chr10	74151814	.	C	CT	2530.26	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.140;DP=578;FS=9.619;HRun=3;HaplotypeScore=64.1923;InbreedingCoeff=0.9990;MQ=81.66;MQ0=0;MQRankSum=-8.432;QD=37.21;ReadPosRankSum=-1.887;VQSLOD=2.9633;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.24:0,78,935	0/0:8,0:8:24.07:0,24,288	0/0:16,0:16:42.06:0,42,472	0/0:20,0:20:44.18:0,44,454	0/0:13,0:13:33.10:0,33,395	0/0:15,0:15:36.08:0,36,407	0/0:21,0:21:60.18:0,60,720	0/0:26,0:26:66.20:0,66,792	0/0:25,0:25:75.22:0,75,887	1/1:3,22:25:75.24:1027,75,0	1/1:3,20:23:60.19:814,60,0	0/0:22,0:22:63.18:0,63,742	0/0:15,0:15:45.14:0,45,540	0/0:27,0:27:78.24:0,78,932	0/0:13,0:13:36.11:0,36,432	0/0:26,0:26:75.23:0,75,900	0/0:22,0:22:66.20:0,66,792	0/0:32,0:32:87.23:0,87,1026	0/0:22,0:22:54.16:0,54,648	0/0:21,0:21:57.16:0,57,671	0/0:17,0:17:51.16:0,51,612	0/0:17,0:17:48.13:0,48,561	0/0:17,0:17:42.09:0,42,468	0/0:26,0:26:66.20:0,66,792	1/1:2,18:20:60.20:831,60,0	0/0:20,0:20:57.17:0,57,677	0/0:24,0:24:69.21:0,69,822	0/0:17,0:17:51.16:0,51,612
chr10	74151835	.	CT	C	1365.63	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.451;DP=584;FS=2.384;HRun=9;HaplotypeScore=71.4884;InbreedingCoeff=0.9974;MQ=76.23;MQ0=0;MQRankSum=-7.458;QD=19.51;ReadPosRankSum=-0.505;VQSLOD=3.9027;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:76.03:0,76,488	0/0:9,0:9:24.06:0,24,268	0/0:12,0:12:32.85:0,33,317	0/0:19,0:18:22.20:0,22,300	0/0:18,0:18:48.14:0,48,554	0/0:16,0:16:45.08:0,45,503	0/0:19,1:20:26.68:0,27,551	0/0:30,0:30:66.66:0,67,755	0/0:21,0:21:60.16:0,60,681	1/1:9,18:27:57.01:521,57,0	1/1:3,18:21:51.02:466,51,0	0/0:28,0:28:72.18:0,72,809	0/0:16,0:16:48.11:0,48,530	0/0:25,0:25:51.13:0,51,569	0/0:17,0:17:48.13:0,48,544	0/0:26,0:26:66.20:0,66,762	0/0:22,1:23:29.71:0,30,596	0/0:32,0:32:87.26:0,87,1004	0/0:17,0:17:36.11:0,36,416	0/0:21,0:21:54.11:0,54,598	0/0:25,0:25:66.15:0,66,738	0/0:15,0:15:45.13:0,45,519	0/0:15,0:15:45.11:0,45,500	0/0:20,0:20:57.13:0,57,643	1/1:3,19:22:57.02:521,57,0	0/0:25,0:25:60.16:0,60,675	0/0:20,0:20:54.16:0,54,623	0/0:16,0:16:45.12:0,45,508
chr10	74153002	.	TAA	T	1256.10	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.888;DP=598;FS=1.825;HRun=13;HaplotypeScore=79.5748;InbreedingCoeff=0.9771;MQ=70.26;MQ0=2;MQRankSum=-0.308;QD=17.94;ReadPosRankSum=2.028;VQSLOD=3.2045;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:89.76:0,90,1223	0/0:7,0:8:20.56:0,21,267	0/0:31,0:14:12.02:0,12,127	0/0:20,0:14:14.90:0,15,134	0/0:24,0:25:66.01:0,66,832	0/0:22,0:25:59.15:0,59,766	0/0:19,0:21:56.67:0,57,776	0/0:23,0:23:48.16:0,48,692	0/0:14,0:15:35.61:0,36,484	1/1:7,27:33:75.03:717,75,0	1/1:1,11:13:23.94:282,24,0	0/0:13,0:14:38.56:0,39,487	0/0:21,0:24:49.63:0,50,625	0/0:16,0:18:41.06:0,41,497	0/0:23,0:26:71.16:0,71,884	0/0:17,1:19:24.46:0,24,598	0/0:23,0:24:59.62:0,60,757	0/0:26,0:27:80.74:0,81,1118	0/0:23,0:24:59.92:0,60,798	0/0:25,0:26:47.97:0,48,780	0/0:10,0:10:27.56:0,28,383	0/0:15,0:17:46.43:0,46,594	0/0:13,0:13:36.11:0,36,503	0/0:17,0:17:48.13:0,48,642	1/1:5,17:23:35.97:399,36,0	0/0:21,0:23:59.47:0,59,802	0/0:26,0:26:63.20:0,63,880	0/0:12,0:12:18.06:0,18,261
chr10	74153286	.	G	GT	2159.60	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.298;DP=686;FS=1.688;HRun=1;HaplotypeScore=70.1797;InbreedingCoeff=0.9982;MQ=86.36;MQ0=0;MQRankSum=-2.656;QD=39.27;ReadPosRankSum=0.496;VQSLOD=4.2364;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.27:0,84,1088	0/0:10,0:10:27.06:0,27,333	0/0:30,0:30:67.86:0,68,880	0/0:16,0:16:42.13:0,42,537	0/0:16,0:16:45.13:0,45,570	0/0:24,0:24:72.22:0,72,919	0/0:31,0:31:93.29:0,93,1192	0/0:35,0:35:99:0,102,1299	0/0:20,0:20:51.15:0,51,648	1/1:4,25:30:87.19:1200,87,0	1/1:0,8:8:24.08:359,24,0	0/0:41,0:41:99:0,120,1542	0/0:21,0:21:60.19:0,60,778	0/0:38,0:38:99:0,108,1366	0/0:39,0:39:99:0,117,1489	0/0:17,0:17:51.17:0,51,661	0/0:33,0:33:96.31:0,96,1245	0/0:15,0:15:45.15:0,45,580	0/0:24,0:24:69.19:0,69,854	0/0:15,0:15:45.15:0,45,584	0/0:46,0:46:99:0,135,1722	0/0:21,0:21:60.20:0,60,779	0/0:15,0:15:45.13:0,45,570	0/0:31,0:31:90.27:0,90,1152	1/1:1,16:17:51.16:743,51,0	0/0:22,1:23:24.28:0,24,809	0/0:25,0:25:72.17:0,72,874	0/0:16,0:16:48.16:0,48,623
chr10	74154735	.	TAAAAAGAAGCCCCCAAAAAAAAAAAAAAAAAAAAAAAAA	T	4576.62	PASS	AB=0.999;AC=19;AF=0.339;AN=56;BaseQRankSum=-5.594;DP=510;FS=32.021;HRun=0;HaplotypeScore=402.1007;InbreedingCoeff=-0.0313;MQ=71.31;MQ0=13;MQRankSum=0.809;QD=18.09;ReadPosRankSum=-0.833;VQSLOD=2.0086;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:60.31:0,60,5444	0/0:6,0:6:15.02:0,15,1210	0/1:54,0:13:76.93:77,0,697	0/0:74,0:24:25.51:0,26,899	0/0:21,0:21:51.51:0,52,3550	0/0:7,0:7:15.52:0,16,1399	0/1:13,0:13:44.95:45,0,1594	0/1:13,0:13:52.81:53,0,813	0/0:13,0:13:6.12:0,6,2027	1/1:2,12:14:29.78:1296,30,0	1/1:10,3:13:23.78:977,24,0	0/1:7,0:7:34.90:35,0,486	0/0:13,0:13:24.06:0,24,1799	0/1:8,0:8:1.94:2,0,1011	0/1:9,0:9:15.51:16,0,402	0/1:13,0:13:19.85:20,0,2030	0/1:12,0:12:42.85:43,0,1844	0/0:11,0:11:21.07:0,21,1779	0/0:19,0:19:42.08:0,42,1666	0/1:21,0:21:17.79:18,0,3211	0/0:6,0:6:9.01:0,9,412	0/1:11,0:11:22.87:23,0,1219	0/1:9,0:9:79.86:80,0,682	0/1:15,0:15:14.85:15,0,2247	1/1:15,5:20:47.68:1793,48,0	0/0:18,0:18:20.14:0,20,2676	0/1:16,0:16:84.80:85,0,1477	0/0:34,0:34:92.85:0,93,7941
chr10	74154861	.	C	CAAG	3752.66	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.735;DP=641;FS=5.823;HRun=0;HaplotypeScore=99.0241;InbreedingCoeff=0.9995;MQ=81.25;MQ0=0;MQRankSum=-3.800;QD=57.73;ReadPosRankSum=-0.600;VQSLOD=5.3270;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:99:0,108,1781	0/0:10,0:10:30.10:0,30,495	0/0:16,0:16:48.13:0,48,755	0/0:21,0:21:55.43:0,55,889	0/0:23,0:23:69.24:0,69,1146	0/0:20,0:20:54.18:0,54,897	0/0:22,0:22:63.21:0,63,1039	0/0:22,0:22:63.22:0,63,1049	0/0:14,0:14:42.14:0,42,700	1/1:4,22:27:78.27:1720,78,0	1/1:3,13:16:36.12:802,36,0	0/0:25,0:25:75.24:0,75,1224	0/0:13,0:13:36.12:0,36,581	0/0:21,0:21:60.21:0,60,1000	0/0:20,0:20:57.19:0,57,950	0/0:23,0:23:69.21:0,69,1101	0/0:38,0:38:96.33:0,96,1595	0/0:21,0:21:63.22:0,63,1050	0/0:28,0:28:75.26:0,75,1247	0/0:22,0:22:60.21:0,60,997	0/0:50,0:50:99:0,150,2455	0/0:13,0:13:39.13:0,39,650	0/0:11,0:11:33.11:0,33,549	0/0:28,0:28:78.27:0,78,1300	1/1:6,16:21:66.09:1231,66,0	0/0:34,1:35:34.46:0,34,1582	0/0:23,0:23:69.23:0,69,1126	0/0:17,0:17:51.15:0,51,822
chr10	74155621	.	T	TTGTGTG	7447.68	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=0.391;DP=765;FS=0.881;HRun=0;HaplotypeScore=179.6865;InbreedingCoeff=0.9377;MQ=59.47;MQ0=2;MQRankSum=-11.977;QD=38.79;ReadPosRankSum=-1.190;VQSLOD=4.4681;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:41:63.21:0,63,901	0/0:12,0:13:24.08:0,24,466	0/0:26,0:15:15.38:0,15,465	0/0:20,0:13:12.03:0,12,206	0/0:28,0:29:57.19:0,57,1196	0/0:25,0:26:51.17:0,51,1042	0/0:38,0:41:69.23:0,69,1401	0/0:34,0:36:42.07:0,42,763	1/1:8,15:27:45.15:1356,45,0	1/1:23,0:23:22.63:418,23,0	1/1:9,0:8:3.01:46,3,0	1/1:12,13:30:54.18:1591,54,0	1/1:10,9:22:45.15:1323,45,0	0/0:29,0:31:70.12:0,70,1428	0/0:43,0:43:93.29:0,93,1829	0/0:26,0:27:57.19:0,57,1149	0/0:37,0:37:72.23:0,72,1472	0/0:29,0:32:40.02:0,40,1254	0/0:26,0:26:9.22:0,9,516	0/0:13,0:13:27.09:0,27,561	0/0:58,0:59:54.39:0,54,1845	1/1:10,0:21:24.08:629,24,0	1/1:7,8:17:30.10:944,30,0	1/1:22,9:33:32.80:1070,33,0	1/1:10,0:10:6:72,6,0	0/0:24,0:26:48.88:0,49,1043	0/0:32,0:32:63.22:0,63,1321	0/0:10,0:12:21.07:0,21,401
chr10	74156544	.	C	CTATT	987.91	PASS	AB=0.917;AC=19;AF=0.432;AN=44;BaseQRankSum=-2.258;DP=287;FS=0.996;HRun=0;HaplotypeScore=53.9378;InbreedingCoeff=0.5272;MQ=70.35;MQ0=3;MQRankSum=-0.905;QD=9.32;ReadPosRankSum=0.174;VQSLOD=2.1623;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:10.33:0,10,135	0/0:2,0:2:3.01:0,3,42	./.	./.	0/0:8,0:9:6.01:0,6,74	1/1:6,6:13:6.02:141,6,0	1/1:5,2:7:3.01:70,3,0	0/0:34,0:32:14.94:0,15,119	1/1:5,0:5:3.01:70,3,0	1/1:13,0:15:8.24:111,8,0	./.	0/0:7,0:7:6.02:0,6,68	0/0:4,0:4:6.02:0,6,68	0/0:5,0:5:3.01:0,3,46	./.	0/0:6,0:6:9.03:0,9,137	0/0:21,0:21:48.08:0,48,646	0/0:11,0:26:34.33:0,34,307	1/1:11,1:12:3.01:70,3,0	1/1:10,4:14:9.03:197,9,0	./.	0/0:4,0:4:3.01:0,3,34	./.	0/0:11,0:11:6.02:0,6,68	0/1:10,0:11:18.89:60,0,19	1/1:10,1:10:3.01:70,3,0	1/1:5,2:7:6.02:140,6,0	1/1:6,5:11:9.03:211,9,0
chr10	74156545	.	TA	T	55.04	PASS	AB=0.875;AC=3;AF=0.054;AN=56;BaseQRankSum=3.312;DP=281;FS=7.376;HRun=1;HaplotypeScore=39.1724;InbreedingCoeff=0.2637;MQ=69.01;MQ0=3;MQRankSum=0.402;QD=3.24;ReadPosRankSum=-0.146;VQSLOD=-0.5568;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,7:10:2.08:122,2,0	0/0:2,0:2:6.02:0,6,94	0/0:6,0:6:18.04:0,18,212	0/1:6,1:5:22.85:23,0,167	0/0:8,0:8:23.09:0,23,312	0/0:13,0:13:21.05:0,21,272	0/0:7,0:7:18.03:0,18,219	0/0:33,0:31:93.30:0,93,1402	0/0:5,0:5:15.05:0,15,217	0/0:14,0:14:3.89:0,4,111	0/0:8,0:8:22.43:0,22,103	0/0:7,0:7:21.07:0,21,329	0/0:4,0:4:12.03:0,12,168	0/0:4,0:4:12.04:0,12,188	0/0:5,0:5:15.04:0,15,212	0/0:6,0:6:18.03:0,18,240	0/0:20,0:20:60.20:0,60,953	0/0:26,0:26:60.39:0,60,517	0/0:12,0:12:36.12:0,36,539	0/0:14,0:14:42.06:0,42,537	0/0:7,0:7:21.05:0,21,301	0/0:4,0:4:12.03:0,12,166	0/0:6,0:6:18.05:0,18,260	0/0:10,0:10:28.34:0,28,424	0/0:11,0:11:0.49:0,0,101	0/0:10,0:9:27.08:0,27,382	0/0:7,0:7:21.04:0,21,270	0/0:15,0:15:39.06:0,39,469
chr10	74156547	.	TTTA	T	162.59	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=5.808;DP=270;FS=18.427;HRun=0;HaplotypeScore=47.8198;InbreedingCoeff=0.3504;MQ=67.24;MQ0=5;MQRankSum=0.027;QD=4.78;ReadPosRankSum=2.466;VQSLOD=0.0281;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,7:10:6.99:191,7,0	0/0:2,0:2:6.02:0,6,105	0/0:4,0:4:6.02:0,6,66	0/0:9,0:5:4.81:0,5,127	0/0:7,0:7:10.04:0,10,238	0/0:12,0:12:18.06:0,18,310	0/0:6,0:6:12.04:0,12,159	0/0:34,0:32:93.27:0,93,1322	0/0:5,0:5:15.05:0,15,195	0/0:13,0:13:31.49:0,31,270	0/0:8,0:8:22.79:0,23,114	0/0:7,0:7:21.07:0,21,318	0/0:4,0:4:9.03:0,9,174	0/0:4,0:4:12.03:0,12,166	0/0:4,0:4:12.04:0,12,144	0/0:5,0:5:12.04:0,12,244	0/0:20,0:20:60.18:0,60,1236	0/1:24,0:24:66.35:66,0,248	0/0:12,0:12:30.03:0,30,396	0/0:13,0:13:35.99:0,36,458	0/0:7,0:7:15.04:0,15,176	0/0:3,0:3:9.03:0,9,141	0/0:5,0:5:15.03:0,15,191	0/0:10,0:10:27.97:0,28,423	0/0:11,0:11:26.47:0,26,337	0/0:10,0:9:21.06:0,21,267	0/0:6,0:6:18.06:0,18,246	0/0:15,0:15:39.13:0,39,675
chr10	74156594	.	A	AT	397.66	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=3.920;DP=287;FS=4.017;HRun=7;HaplotypeScore=39.7552;InbreedingCoeff=0.7263;MQ=51.80;MQ0=18;MQRankSum=-2.351;QD=15.29;ReadPosRankSum=-1.549;VQSLOD=2.6005;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:39.05:0,39,371	0/0:5,0:5:12.02:0,12,116	0/0:12,0:3:3:0,3,29	0/0:13,0:2:5.95:0,6,47	0/0:11,0:10:27.04:0,27,261	0/0:8,0:8:15.02:0,15,145	0/0:5,0:4:9.01:0,9,87	0/0:37,0:34:86.84:0,87,776	0/0:4,0:3:8.03:0,8,58	1/1:3,7:9:18.05:217,18,0	1/1:3,3:5:12.02:132,12,0	0/0:7,0:7:17.97:0,18,158	0/0:3,0:3:6.01:0,6,58	0/0:4,0:4:12.02:0,12,116	0/0:6,0:6:18.03:0,18,173	0/0:9,0:9:27.04:0,27,261	0/0:31,0:30:84.13:0,84,811	0/0:24,0:24:57.05:0,57,542	0/0:14,0:14:33.05:0,33,319	0/0:8,0:7:18.01:0,18,164	0/0:2,0:2:3:0,3,29	0/0:4,0:4:9.01:0,9,87	./.	0/0:7,0:7:17.97:0,18,163	1/1:2,8:10:15.05:181,15,0	0/0:6,0:6:15.02:0,15,145	0/0:9,0:9:26.99:0,27,251	0/0:14,0:14:30.05:0,30,290
chr10	74157573	.	GCAACAA	G	4764.29	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.350;DP=712;FS=3.398;HRun=0;HaplotypeScore=155.2909;InbreedingCoeff=0.9983;MQ=59.21;MQ0=2;MQRankSum=-12.583;QD=32.86;ReadPosRankSum=1.608;VQSLOD=4.9181;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,105,3296	0/0:9,0:10:24.07:0,24,681	0/0:22,0:18:38.92:0,39,1088	0/0:22,0:16:30.10:0,30,985	0/0:20,0:20:51.16:0,51,1574	0/0:20,0:20:45.15:0,45,1492	0/0:32,0:33:90.25:0,90,2805	0/0:30,0:30:51.17:0,51,1514	1/1:4,17:21:42.14:900,42,0	0/0:27,0:30:66.23:0,66,1510	0/0:17,0:22:54.07:0,54,1023	1/1:9,17:26:45.15:965,45,0	1/1:6,21:28:47.91:1006,48,0	0/0:20,0:20:42.13:0,42,1268	0/0:38,0:38:78.27:0,78,2452	0/0:26,0:26:54.19:0,54,1720	0/0:38,0:38:96.33:0,96,3094	0/0:24,0:24:66.18:0,66,2099	0/0:15,0:15:30.10:0,30,944	0/0:16,0:17:45.10:0,45,1330	0/0:53,0:53:99:0,129,4096	1/1:9,18:27:42.14:899,42,0	1/1:4,10:14:21.07:423,21,0	1/1:7,21:29:30.49:571,30,0	0/0:18,0:24:30.10:0,30,538	0/0:26,0:26:63.21:0,63,1909	0/0:20,0:20:45.15:0,45,1482	0/0:16,0:16:39.13:0,39,1208
chr10	74159566	.	AGCTT	A	2404.69	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.050;DP=689;FS=5.536;HRun=0;HaplotypeScore=110.9757;InbreedingCoeff=0.9994;MQ=82.97;MQ0=0;MQRankSum=-3.395;QD=45.37;ReadPosRankSum=1.597;VQSLOD=4.1955;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,3825	0/0:11,0:11:27.09:0,27,728	0/0:17,0:16:42.14:0,42,1092	0/0:23,0:23:69.06:0,69,1688	0/0:14,0:14:42.14:0,42,1133	0/0:25,0:25:75.24:0,75,1954	0/0:31,0:31:93.31:0,93,2423	0/0:27,0:27:78.26:0,78,2053	0/0:13,0:13:36.12:0,36,963	1/1:1,20:21:60.21:1124,60,0	1/1:2,12:14:30.10:569,30,0	0/0:28,0:28:84.29:0,84,2252	0/0:31,0:31:90.31:0,90,2425	0/0:33,0:33:99:0,99,2659	0/0:23,0:23:66.23:0,66,1781	0/0:20,0:20:60.19:0,60,1564	0/0:37,0:37:99:0,99,2609	0/0:22,0:22:66.23:0,66,1782	0/0:26,0:26:75.25:0,75,1944	0/0:21,0:21:57.20:0,57,1538	0/0:34,0:34:99:0,99,2660	0/0:25,0:25:72.25:0,72,1944	0/0:19,0:19:57.18:0,57,1484	0/0:31,0:31:90.30:0,90,2355	1/1:2,16:18:45.15:854,45,0	0/0:23,0:23:66.23:0,66,1783	0/0:35,0:35:99:0,102,2673	0/0:19,0:19:48.16:0,48,1295
chr10	74159806	.	TC	T	4637.29	PASS	AB=0.952;AC=20;AF=0.370;AN=54;BaseQRankSum=9.278;DP=575;FS=13.287;HRun=9;HaplotypeScore=63.9411;InbreedingCoeff=0.8664;MQ=73.51;MQ0=1;MQRankSum=-1.546;QD=18.04;ReadPosRankSum=5.075;VQSLOD=3.8836;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:93.05:851,93,0	0/0:11,0:11:21.03:0,21,212	0/0:18,1:15:6.48:0,6,295	0/0:19,0:16:32.83:0,33,326	0/0:16,0:16:42.60:0,43,485	0/0:19,0:19:51.12:0,51,567	0/0:33,2:35:47.76:0,48,803	1/1:9,14:23:35.92:322,36,0	1/1:3,17:20:36:329,36,0	0/0:10,0:10:3:0,3,28	./.	1/1:4,24:28:69.02:631,69,0	1/1:1,23:24:66.03:604,66,0	0/0:23,0:23:57.06:0,57,611	0/0:19,0:19:51.14:0,51,580	0/0:10,0:10:24.07:0,24,277	0/0:32,0:31:81.22:0,81,925	1/1:10,27:37:66.02:604,66,0	0/1:17,2:19:6.50:7,0,437	0/0:11,0:11:27.08:0,27,311	0/0:36,0:36:90.24:0,90,1017	1/1:1,14:15:36.02:329,36,0	1/1:5,15:20:36:329,36,0	1/1:6,25:31:69.02:631,69,0	0/1:7,0:7:0.01:0,0,0	0/0:22,1:23:23.50:0,24,497	0/0:23,0:24:59.97:0,60,644	0/0:10,0:10:27.07:0,27,302
chr10	74160231	.	G	GA	1923.75	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.415;DP=635;FS=0.555;HRun=1;HaplotypeScore=71.5834;InbreedingCoeff=0.9982;MQ=93.84;MQ0=0;MQRankSum=-0.937;QD=39.26;ReadPosRankSum=1.457;VQSLOD=4.3055;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1542	0/0:7,0:7:21.03:0,21,241	0/0:33,0:33:90.16:0,90,1133	0/0:23,0:23:43.46:0,43,619	0/0:18,0:18:51.17:0,51,662	0/0:24,0:24:72.15:0,72,871	0/0:30,0:30:90.24:0,90,1122	0/0:19,0:19:54.17:0,54,689	0/0:16,0:16:48.16:0,48,620	1/1:0,19:18:54.18:808,54,0	1/1:0,11:11:33.11:494,33,0	0/0:22,0:22:63.20:0,63,818	0/0:21,0:21:60.19:0,60,777	0/0:34,0:34:96.30:0,96,1222	0/0:22,0:22:63.20:0,63,818	0/0:21,0:21:63.20:0,63,817	0/0:37,0:37:99:0,105,1347	0/0:35,0:35:99:0,105,1329	0/0:22,0:22:60.19:0,60,777	0/0:15,0:15:45.15:0,45,584	0/0:29,0:29:87.27:0,87,1116	0/0:21,0:21:63.19:0,63,792	0/0:19,0:19:57.19:0,57,740	0/0:22,0:22:66.21:0,66,857	1/1:0,19:19:51.17:764,51,0	0/0:25,0:25:72.23:0,72,935	0/0:20,0:20:60.19:0,60,779	0/0:10,0:10:30.10:0,30,388
chr10	74160711	.	C	CTCT	3003.01	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.962;DP=708;FS=34.988;HRun=0;HaplotypeScore=103.2485;InbreedingCoeff=0.9940;MQ=81.08;MQ0=0;MQRankSum=-3.566;QD=46.92;ReadPosRankSum=0.804;VQSLOD=2.4683;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,1824	0/0:13,0:13:36.12:0,36,571	0/0:22,0:22:44.96:0,45,644	0/0:24,0:24:16.30:0,16,501	0/0:17,0:17:39.13:0,39,616	0/0:17,0:17:48.16:0,48,752	0/0:24,0:24:69.21:0,69,1069	0/0:29,0:29:63.20:0,63,960	0/0:18,0:18:45.15:0,45,695	1/1:5,20:26:66.19:1357,66,0	1/1:4,11:16:30.06:610,30,0	0/0:27,0:27:78.22:0,78,1148	0/0:15,0:15:45.15:0,45,714	0/0:28,0:28:78.27:0,78,1233	0/0:36,0:36:99:0,105,1642	0/0:23,0:23:63.20:0,63,971	0/0:37,0:36:99:0,99,1495	0/0:38,0:38:99:0,105,1633	0/0:22,0:22:54.18:0,54,836	0/0:19,0:19:57.19:0,57,900	0/0:42,0:42:99:0,114,1805	0/0:30,0:30:81.27:0,81,1258	0/0:19,0:19:51.17:0,51,788	0/0:39,0:39:99:0,105,1612	1/1:2,20:22:54.19:1179,54,0	0/0:31,0:31:81.28:0,81,1283	0/0:24,0:24:69.20:0,69,1044	0/0:7,0:7:21.07:0,21,333
chr10	74163126	.	GC	G	646.01	PASS	AB=0.957;AC=8;AF=0.143;AN=56;BaseQRankSum=6.801;DP=544;FS=1.465;HRun=8;HaplotypeScore=58.2106;InbreedingCoeff=0.7572;MQ=79.88;MQ0=0;MQRankSum=-2.968;QD=9.23;ReadPosRankSum=0.432;VQSLOD=1.2178;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:84.26:0,84,1013	0/0:11,0:11:24.06:0,24,279	0/0:15,0:15:21.10:0,21,305	0/1:14,0:14:4.06:4,0,188	0/0:17,0:17:45.09:0,45,503	0/0:20,0:20:48.06:0,48,521	0/0:20,0:20:57.17:0,57,677	0/0:26,0:26:35.97:0,36,369	0/0:22,0:22:60.17:0,60,713	1/1:1,15:16:42.07:405,42,0	1/1:0,8:8:18.03:174,18,0	0/0:18,0:18:45.13:0,45,534	0/0:21,0:21:51.15:0,51,603	0/0:23,0:23:63.15:0,63,734	0/0:21,0:21:60.17:0,60,714	0/0:20,0:20:60.18:0,60,723	0/0:39,0:39:99:0,102,1208	0/0:26,0:26:75.23:0,75,905	0/0:10,0:10:27.08:0,27,326	0/0:13,0:13:36.08:0,36,401	0/0:27,0:27:66.16:0,66,761	0/0:14,0:14:36.06:0,36,390	0/0:13,0:13:39.07:0,39,425	0/0:31,0:31:84.23:0,84,987	1/1:3,7:10:21.03:203,21,0	0/1:19,2:21:6.79:7,0,477	0/0:17,0:17:45.14:0,45,540	0/0:13,0:13:30.07:0,30,339
chr10	74164740	.	G	GGT	1276.63	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=4.201;DP=775;FS=3.248;HRun=0;HaplotypeScore=151.9624;InbreedingCoeff=0.5188;MQ=66.96;MQ0=14;MQRankSum=-0.770;QD=6.20;ReadPosRankSum=-0.708;VQSLOD=3.4348;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:44:75.05:75,0,148	0/0:8,0:8:18.03:0,18,195	0/0:31,0:22:23.41:0,23,209	0/0:40,0:24:10.25:0,10,102	0/0:17,0:17:28.90:0,29,438	0/0:22,0:22:39.59:0,40,452	0/0:31,0:34:68.53:0,69,714	1/1:24,2:24:24.27:333,24,0	0/0:30,0:30:14.34:0,14,289	0/1:27,0:26:3.55:179,0,4	1/1:16,0:16:3:25,3,0	0/0:33,0:33:7.48:0,7,242	0/0:18,0:18:35.31:0,35,217	0/0:38,0:40:87.03:0,87,951	0/0:27,0:32:19.69:0,20,588	0/0:19,0:20:47.97:0,48,533	0/0:30,0:31:20.44:0,20,521	1/1:19,21:39:10.07:772,10,0	0/0:25,0:24:20.98:0,21,211	0/0:14,0:14:39.10:0,39,440	0/0:59,0:60:89.47:0,89,1055	0/1:20,0:19:10.21:10,0,73	0/1:11,0:11:10.33:10,0,48	0/0:43,0:43:57.44:0,57,435	1/1:22,0:21:5.67:29,6,0	0/0:29,0:31:49.19:0,49,567	0/0:19,0:20:44.92:0,45,475	0/0:15,0:17:38.78:0,39,409
chr10	74164765	.	GTC	G	2100.79	PASS	AB=0.966;AC=12;AF=0.214;AN=56;BaseQRankSum=5.057;DP=814;FS=4.936;HRun=0;HaplotypeScore=146.3481;InbreedingCoeff=-0.0624;MQ=56.96;MQ0=19;MQRankSum=-0.353;QD=6.61;ReadPosRankSum=-7.016;VQSLOD=0.5489;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:42,4:46:99:514,0,151	0/0:11,0:11:18.05:0,18,369	0/0:41,0:19:44.27:0,44,372	0/0:41,0:15:8.69:0,9,165	0/0:22,0:22:52.86:0,53,903	0/0:20,0:20:48.12:0,48,776	0/0:41,0:40:49.73:0,50,1389	1/1:20,5:23:52.06:569,52,0	0/1:29,2:31:99:105,0,321	0/1:32,0:31:59.82:60,0,436	0/1:19,0:19:9.73:10,0,80	0/1:31,0:31:99:140,0,299	0/1:17,1:18:93.45:93,0,199	0/0:41,0:41:99:0,101,1633	0/0:37,1:37:37.93:0,38,1274	0/0:25,0:25:64.65:0,65,978	0/0:30,0:30:76.62:0,77,1154	0/1:36,1:36:20.66:161,0,21	0/0:20,0:18:50.89:0,51,572	0/0:19,0:19:56.78:0,57,837	0/0:55,0:54:87.22:0,87,2008	0/1:23,1:23:70.21:219,0,70	0/1:10,0:10:64.43:86,0,64	0/1:41,4:45:99:299,0,386	0/0:23,0:22:15.46:0,15,128	0/0:36,0:36:84.57:0,85,1207	0/0:19,0:19:27.63:0,28,761	0/0:14,0:14:20.34:0,20,635
chr10	74165929	.	C	CAT	293.74	PASS	AB=0.971;AC=4;AF=0.077;AN=52;BaseQRankSum=-2.761;DP=251;FS=4.746;HRun=0;HaplotypeScore=31.2145;InbreedingCoeff=0.3320;MQ=71.06;MQ0=1;MQRankSum=-0.350;QD=7.34;ReadPosRankSum=1.625;VQSLOD=2.4406;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,8:12:24.08:383,24,0	0/0:2,0:2:6.02:0,6,73	0/0:3,0:1:2.88:0,3,15	0/1:12,0:8:0.01:0,0,0	0/0:12,0:12:30.09:0,30,366	0/0:19,0:19:35.90:0,36,439	0/0:2,0:2:3:0,3,26	0/0:43,0:43:66.56:0,67,1030	0/0:5,0:5:15.05:0,15,183	0/0:5,0:4:12.04:0,12,147	0/0:2,0:2:6.02:0,6,73	0/0:1,0:1:3.01:0,3,37	0/0:5,0:5:12.01:0,12,123	0/0:4,0:4:12.04:0,12,147	0/0:4,0:4:12.04:0,12,147	./.	0/0:25,2:27:11.56:0,12,632	0/0:28,0:31:65.87:0,66,761	0/0:5,0:6:14.88:0,15,161	0/0:2,0:2:3.01:0,3,37	0/0:7,0:7:12.04:0,12,146	0/0:2,0:2:3.01:0,3,36	0/0:6,0:6:15:0,15,166	./.	0/0:8,1:9:18.06:0,18,220	0/0:7,0:7:21.05:0,21,237	0/0:6,0:6:15.05:0,15,183	0/1:15,1:16:9.52:10,0,399
chr10	74169877	.	C	CA	1939.78	PASS	AB=0.909;AC=7;AF=0.125;AN=56;BaseQRankSum=4.829;DP=592;FS=3.852;HRun=8;HaplotypeScore=76.1569;InbreedingCoeff=0.8377;MQ=79.39;MQ0=0;MQRankSum=0.036;QD=25.19;ReadPosRankSum=0.917;VQSLOD=4.5159;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,129,1181	0/1:9,1:10:10.60:11,0,168	0/0:22,0:21:24.72:0,25,359	0/0:12,0:12:32.84:0,33,299	0/0:30,0:30:75.03:0,75,686	0/0:24,0:23:69.02:0,69,627	0/0:14,0:14:35.98:0,36,318	0/0:24,0:24:65.97:0,66,589	0/0:16,0:16:39.01:0,39,357	1/1:1,18:19:54.16:623,54,0	1/1:1,18:20:53.95:588,54,0	0/0:23,0:23:60.02:0,60,549	0/0:19,0:19:51.02:0,51,466	0/0:19,0:19:39.01:0,39,357	0/0:20,0:20:54.03:0,54,494	0/0:22,0:22:57.02:0,57,521	0/0:34,0:34:87.02:0,87,792	0/0:29,0:29:66.02:0,66,604	0/0:23,0:24:71.05:0,71,631	0/0:28,0:28:75.03:0,75,686	0/0:11,0:11:21:0,21,192	0/0:7,0:7:12:0,12,110	0/0:17,0:17:38.69:0,39,356	0/0:17,0:17:35.05:0,35,308	1/1:2,26:28:75.22:866,75,0	0/0:26,0:26:78.04:0,78,714	0/0:20,0:20:33:0,33,302	0/0:11,0:11:30.01:0,30,275
chr10	74169904	.	TAATTATAG	T	3631.14	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.749;DP=544;FS=1.927;HRun=0;HaplotypeScore=145.3334;InbreedingCoeff=0.9167;MQ=67.13;MQ0=0;MQRankSum=-10.661;QD=38.63;ReadPosRankSum=0.403;VQSLOD=3.6295;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:81.25:0,81,3209	0/0:7,0:7:18.06:0,18,754	0/0:10,0:9:3.48:0,3,124	0/0:8,0:8:3.48:0,3,118	0/0:27,0:27:63.22:0,63,2563	0/0:25,0:24:63.22:0,63,2481	0/0:10,0:10:18.06:0,18,687	0/0:36,0:36:78.26:0,78,3048	1/1:6,8:14:21.07:543,21,0	0/0:22,0:22:66.22:0,66,2533	0/0:15,0:15:27.09:0,27,1073	1/1:6,15:21:27.09:699,27,0	1/1:4,14:18:36.12:932,36,0	0/0:11,0:11:27.09:0,27,1070	0/0:18,0:18:36.12:0,36,1349	0/0:16,0:16:39.13:0,39,1536	0/0:30,0:30:72.19:0,72,2698	0/0:26,0:26:66.23:0,66,2518	0/0:26,0:26:39.13:0,39,1539	0/0:30,0:30:66.23:0,66,2730	0/0:10,0:10:24.08:0,24,1006	1/1:1,10:11:18.06:444,18,0	1/1:2,16:18:32.43:780,32,0	1/1:5,7:12:9.03:233,9,0	0/0:34,0:34:81.28:0,81,3395	0/0:27,0:27:54.19:0,54,2256	0/0:16,0:16:39.13:0,39,1552	0/0:9,0:9:18.06:0,18,518
chr10	74173963	.	CT	C	753.16	PASS	AB=0.895;AC=7;AF=0.125;AN=56;BaseQRankSum=6.938;DP=543;FS=16.054;HRun=11;HaplotypeScore=58.6598;InbreedingCoeff=0.7286;MQ=74.32;MQ0=1;MQRankSum=-0.447;QD=11.08;ReadPosRankSum=1.619;VQSLOD=1.2592;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:42:99:0,105,1051	0/0:15,0:15:39.10:0,39,415	0/0:17,1:18:2.35:0,2,171	0/0:15,0:13:18.01:0,18,170	0/0:24,1:25:20.48:0,20,495	0/0:22,0:22:63.16:0,63,672	0/0:20,0:20:48.10:0,48,497	0/0:33,1:34:41.50:0,42,622	0/0:18,0:18:45.11:0,45,474	1/1:6,12:17:32.93:271,33,0	1/1:1,13:15:40.99:326,41,0	0/0:15,0:15:36.08:0,36,378	0/0:18,0:18:48.11:0,48,503	0/0:14,0:14:39.05:0,39,397	0/0:24,0:25:41.35:0,41,623	0/0:21,2:23:7.86:0,8,494	0/0:17,0:17:48.08:0,48,493	0/0:21,0:22:59.97:0,60,615	0/0:21,0:23:44.76:0,45,431	0/0:21,0:21:39.49:0,39,505	0/0:13,1:14:8.43:0,8,289	0/0:10,1:11:2.42:0,2,225	0/0:14,1:15:11.36:0,11,295	0/0:25,0:25:60.15:0,60,640	1/1:4,14:18:35.80:295,36,0	0/1:14,2:17:4.32:4,0,342	0/0:14,0:14:36.56:0,37,384	0/0:8,0:8:24.06:0,24,256
chr10	74175510	.	GA	G	757.91	PASS	AB=0.898;AC=9;AF=0.161;AN=56;BaseQRankSum=6.871;DP=406;FS=3.783;HRun=10;HaplotypeScore=42.1229;InbreedingCoeff=0.5915;MQ=75.63;MQ0=1;MQRankSum=-1.138;QD=7.73;ReadPosRankSum=0.868;VQSLOD=1.0287;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:62.99:0,63,670	0/0:7,0:7:21.06:0,21,232	0/0:14,0:8:8.30:0,8,70	0/0:12,0:10:8.59:0,9,56	0/0:16,0:16:39.11:0,39,431	0/0:13,1:14:12.67:0,13,349	0/1:10,1:11:8.01:8,0,148	0/0:30,0:30:84.20:0,84,903	0/0:11,0:12:32.91:0,33,339	1/1:0,11:11:32.99:286,33,0	1/1:2,10:12:26.99:234,27,0	0/0:10,0:10:24.06:0,24,265	0/0:10,0:10:15.04:0,15,166	0/0:10,0:10:21.04:0,21,224	0/0:7,0:8:20.89:0,21,213	0/0:9,0:9:24.06:0,24,258	0/1:25,4:29:44.11:44,0,447	0/0:19,0:19:54.09:0,54,574	0/0:13,1:15:12.89:0,13,353	0/0:15,0:15:33.07:0,33,349	0/0:10,0:10:27.03:0,27,277	0/0:10,0:10:27.07:0,27,299	0/0:18,0:18:51.14:0,51,564	0/0:10,0:10:30.08:0,30,332	1/1:1,16:17:11.81:331,12,0	0/0:18,1:19:16.05:0,16,394	0/1:15,2:18:3.65:4,0,397	0/0:19,0:19:57.14:0,57,621
chr10	74176433	.	TCC	T	1291.91	PASS	AB=0.932;AC=21;AF=0.389;AN=54;BaseQRankSum=7.188;DP=432;FS=3.101;HRun=3;HaplotypeScore=80.1292;InbreedingCoeff=0.7072;MQ=54.56;MQ0=34;MQRankSum=-1.065;QD=5.77;ReadPosRankSum=-0.944;VQSLOD=-0.3375;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:21,2:20:21.90:142,0,22	./.	0/1:23,0:7:2.23:2,0,155	0/0:21,1:12:12.90:0,13,137	0/0:15,0:14:26.99:0,27,318	0/0:15,0:14:15.79:0,16,458	0/0:19,0:18:39.07:0,39,646	1/1:19,0:17:30.72:204,31,0	0/1:17,2:17:0.14:120,0,0	1/1:27,0:26:22.22:229,22,0	1/1:13,0:11:8.48:58,8,0	1/1:9,4:13:18.73:133,19,0	1/1:8,2:8:8.51:60,9,0	0/0:8,0:8:21.06:0,21,365	0/0:11,0:10:27.05:0,27,473	0/0:12,0:7:20.96:0,21,356	0/0:20,0:20:34.15:0,34,730	0/1:12,0:11:0.18:149,0,0	0/0:15,0:9:19.14:0,19,260	0/0:12,0:12:23.75:0,24,291	0/0:27,0:23:60.73:0,61,1005	0/1:8,2:9:0.12:37,0,0	1/1:10,2:12:17.84:135,18,0	1/1:20,3:19:9.73:71,10,0	1/1:20,0:19:27.10:145,27,0	0/0:21,0:20:28.67:0,29,666	0/0:6,0:3:8.68:0,9,93	0/0:5,0:4:11.93:0,12,189
chr10	74176435	.	C	CT	184.38	PASS	AB=0.862;AC=7;AF=0.130;AN=54;BaseQRankSum=6.172;DP=428;FS=15.571;HRun=0;HaplotypeScore=86.9736;InbreedingCoeff=-0.0596;MQ=53.68;MQ0=38;MQRankSum=1.348;QD=1.52;ReadPosRankSum=2.316;VQSLOD=0.9766;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,1:20:14.57:15,0,89	./.	0/0:23,0:7:12.39:0,12,148	0/0:20,1:11:20.32:0,20,169	0/0:14,0:13:21.52:0,22,254	0/0:17,0:15:37.26:0,37,490	0/0:19,0:18:39.12:0,39,533	0/0:18,0:16:36.56:0,37,210	0/1:17,0:15:2.93:3,0,67	0/1:21,4:24:77.36:77,0,202	0/1:7,6:11:10.19:63,0,10	0/1:12,1:13:9.35:9,0,78	0/1:9,1:8:3.06:3,0,74	0/0:8,0:8:21.07:0,21,290	0/0:12,0:11:27.04:0,27,374	0/0:12,0:7:21.07:0,21,289	0/0:20,0:19:42.88:0,43,574	0/0:12,0:11:27.52:0,28,140	0/0:15,0:9:24.08:0,24,310	0/0:10,0:10:24.08:0,24,322	0/0:28,0:22:60.20:0,60,815	0/0:11,0:10:9.60:0,10,69	0/0:12,0:12:9.79:0,10,58	0/0:21,1:18:7.69:0,8,39	0/1:11,9:19:6.20:130,0,6	0/0:21,0:20:54.07:0,54,683	0/0:6,0:3:9.03:0,9,124	0/0:6,0:4:12.04:0,12,155
chr10	74176509	.	T	TC	637.23	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=2.681;DP=402;FS=1.194;HRun=1;HaplotypeScore=79.1054;InbreedingCoeff=0.8690;MQ=60.00;MQ0=7;MQRankSum=-0.782;QD=7.41;ReadPosRankSum=2.436;VQSLOD=1.0207;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:38.55:0,39,358	0/0:11,0:11:18.71:0,19,177	0/0:41,0:7:17.68:0,18,136	0/0:31,0:8:7.10:0,7,67	0/0:12,0:12:18.83:0,19,154	0/0:14,0:14:23.12:0,23,223	0/0:18,0:18:32.97:0,33,330	1/1:12,0:12:17.24:97,17,0	0/0:15,0:15:29.14:0,29,268	0/0:6,0:6:6.16:0,6,64	0/0:9,0:9:18.32:0,18,141	0/0:12,0:12:14.91:0,15,117	0/0:5,0:5:14.86:0,15,117	0/0:7,0:7:14.99:0,15,142	0/0:10,0:10:24.57:0,25,217	0/0:16,0:16:22.32:0,22,220	0/0:29,0:29:28.02:0,28,467	1/1:12,1:13:20.46:144,20,0	1/1:15,1:16:36.69:206,37,0	1/1:5,0:5:5.48:16,5,0	1/1:13,1:14:26.77:147,27,0	0/0:12,0:11:20.72:0,21,164	0/0:13,0:13:17.50:0,17,133	0/0:20,0:19:28.01:0,28,244	0/0:9,0:9:1.04:0,1,65	1/1:9,0:8:17.31:69,17,0	1/1:12,1:13:14.33:139,14,0	1/1:4,0:4:5.19:12,5,0
chr10	74179116	.	A	AGCT	1296.14	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.032;DP=666;FS=1.557;HRun=0;HaplotypeScore=103.9889;InbreedingCoeff=0.8873;MQ=62.72;MQ0=3;MQRankSum=1.131;QD=20.25;ReadPosRankSum=-1.373;VQSLOD=3.4695;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:45.08:0,45,560	0/0:5,0:5:9.43:0,9,70	0/0:12,0:8:14.94:0,15,170	0/0:22,0:19:41.73:0,42,424	0/0:4,0:4:12.01:0,12,135	0/0:14,0:13:15.03:0,15,197	0/0:48,0:48:99:0,102,1317	1/1:12,11:24:35.63:369,36,0	0/0:23,0:23:32.71:0,33,414	0/0:23,0:23:36.02:0,36,413	0/0:9,0:9:21.04:0,21,266	0/0:26,0:24:45.14:0,45,636	0/0:17,0:17:42:0,42,488	0/0:21,0:20:33.11:0,33,472	0/0:19,0:19:35.98:0,36,416	0/0:21,0:20:42.08:0,42,567	0/0:40,0:40:99:0,108,1377	1/1:6,29:40:51.18:1048,51,0	0/0:29,0:27:47.83:0,48,413	0/0:6,0:6:9:0,9,92	0/0:86,0:86:99:0,181,2188	0/0:11,0:11:12.01:0,12,155	0/0:10,0:10:21.05:0,21,284	0/0:65,0:65:99:0,153,1955	0/0:9,0:9:17.97:0,18,243	0/0:23,0:23:33.05:0,33,389	0/0:15,0:14:24.08:0,24,347	0/0:7,0:7:14.96:0,15,169
chr10	74179268	.	G	GTGT	112.30	PASS	AB=0.990;AC=15;AF=0.288;AN=52;BaseQRankSum=1.381;DP=452;FS=2.569;HRun=0;HaplotypeScore=163.6359;InbreedingCoeff=-0.2757;MQ=30.55;MQ0=36;MQRankSum=-3.787;QD=0.57;ReadPosRankSum=-3.580;VQSLOD=1.7119;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:9:15.05:0,15,218	0/0:12,1:12:9.21:0,9,122	./.	./.	0/0:12,0:9:2.99:0,3,35	0/0:18,1:15:10.16:0,10,189	0/0:33,0:27:21.74:0,22,165	0/0:9,0:8:1.83:0,2,58	0/1:17,1:15:13.72:14,0,132	0/1:23,0:19:22.74:23,0,190	0/1:7,0:7:0:0,0,0	0/1:14,0:9:19.97:20,0,123	0/1:7,0:5:13.07:13,0,30	0/1:22,0:21:43.05:43,0,131	0/0:24,1:20:1.84:0,2,237	0/1:18,0:15:12.99:13,0,104	0/0:18,0:14:29.71:0,30,192	0/1:4,0:2:12.89:14,0,13	0/1:19,0:14:15.34:15,0,235	0/1:16,0:16:21.94:22,0,50	0/0:37,5:30:0.81:0,1,194	0/1:9,0:8:14.53:15,0,17	1/1:5,0:5:1.17:5,1,0	0/0:20,1:18:20.90:0,21,191	0/1:22,0:20:7.27:7,0,102	0/0:25,0:21:38.49:0,38,253	0/0:23,0:20:28.61:0,29,268	0/1:11,1:11:43.70:44,0,64
chr10	74179375	.	TG	T	506.77	PASS	AB=0.696;AC=9;AF=0.167;AN=54;BaseQRankSum=3.610;DP=434;FS=9.636;HRun=2;HaplotypeScore=107.8923;InbreedingCoeff=0.4317;MQ=38.38;MQ0=14;MQRankSum=-1.539;QD=9.75;ReadPosRankSum=-0.700;VQSLOD=0.4367;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,6:7:11.95:124,12,0	0/0:5,0:4:9.87:0,10,115	0/0:21,0:3:6.02:0,6,90	0/0:28,0:6:12.86:0,13,163	0/0:19,0:18:8.03:0,8,173	0/0:27,0:25:57.18:0,57,830	0/0:27,0:26:60.16:0,60,872	0/0:27,0:22:66.21:0,66,967	0/1:6,1:5:23.71:24,0,120	0/0:20,0:17:36.44:0,36,533	0/0:5,0:4:3.01:0,3,45	1/1:1,7:8:11.65:154,12,0	0/1:4,4:7:76.40:136,0,76	0/0:16,0:14:38.58:0,39,425	0/0:16,0:16:42.10:0,42,602	0/0:11,0:10:26.82:0,27,379	0/0:20,0:20:53.93:0,54,748	0/0:2,0:2:6.02:0,6,90	0/0:17,0:12:32.60:0,33,459	0/0:21,0:21:45.09:0,45,597	0/0:29,0:28:24.81:0,25,337	1/1:0,4:3:3.01:39,3,0	./.	0/1:3,15:16:26.42:172,0,26	0/0:22,0:20:39.06:0,39,543	0/0:23,0:22:54.14:0,54,777	0/0:10,0:10:30.10:0,30,449	0/0:14,0:13:27.07:0,27,381
chr10	74179386	.	GTAA	G	68.40	PASS	AB=0.918;AC=7;AF=0.125;AN=56;BaseQRankSum=3.805;DP=499;FS=3.335;HRun=0;HaplotypeScore=128.1791;InbreedingCoeff=-0.1805;MQ=38.44;MQ0=20;MQRankSum=-4.806;QD=0.60;ReadPosRankSum=-2.300;VQSLOD=1.9068;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:15.04:0,15,307	0/1:4,2:5:19.50:19,0,195	0/0:27,0:4:11.98:0,12,163	0/0:32,0:10:6.48:0,6,407	0/1:17,2:19:61.85:62,0,420	0/0:30,0:28:37.43:0,37,802	0/0:32,0:31:72.13:0,72,1308	0/0:30,1:26:7.49:0,7,1014	0/1:9,0:7:15.44:15,0,226	0/0:22,0:19:32:0,32,657	0/0:5,0:4:3.01:0,3,66	0/0:12,0:12:24.02:0,24,403	0/0:9,0:8:19.87:0,20,323	0/1:16,1:15:10.31:10,0,791	0/0:18,0:18:26.56:0,27,816	0/0:12,0:11:29.75:0,30,626	0/0:23,0:23:61.45:0,61,1257	0/0:2,0:2:6.02:0,6,106	0/1:17,1:12:25.45:25,0,379	0/1:20,1:21:19.73:20,0,778	0/0:30,0:29:52.59:0,53,887	0/0:7,0:4:6.02:0,6,109	0/0:3,0:3:5.97:0,6,65	0/1:22,0:21:42.15:42,0,280	0/0:26,0:24:29.94:0,30,908	0/0:26,1:26:3.31:0,3,1046	0/0:14,0:12:31.65:0,32,616	0/0:15,0:14:29.31:0,29,563
chr10	74179404	.	A	ATGGTGG	353.32	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=2.394;DP=585;FS=5.713;HRun=0;HaplotypeScore=170.9458;InbreedingCoeff=0.6564;MQ=43.81;MQ0=13;MQRankSum=-3.935;QD=6.93;ReadPosRankSum=-1.251;VQSLOD=1.7555;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:27.09:0,27,561	0/0:12,0:11:20.10:0,20,396	0/0:30,0:13:35.33:0,35,666	0/0:35,0:22:21.83:0,22,779	0/0:26,0:25:30.57:0,31,602	0/0:25,0:24:46.92:0,47,1021	0/0:36,0:35:57.19:0,57,1160	1/1:33,0:29:15.05:210,15,0	0/0:13,0:10:23.65:0,24,406	0/0:29,0:27:45.01:0,45,895	0/0:5,0:5:10.26:0,10,155	0/0:16,0:16:42.14:0,42,814	0/1:13,0:12:60.34:60,0,408	0/0:24,0:22:61.09:0,61,1222	0/0:22,0:22:42.14:0,42,859	0/0:14,0:13:30.57:0,31,638	0/0:27,0:27:72.24:0,72,1506	1/1:0,4:5:6.02:201,6,0	0/0:18,0:15:27.02:0,27,484	0/0:24,0:24:39.86:0,40,1066	0/0:33,0:32:54.18:0,54,1114	0/0:10,0:6:12.04:0,12,257	0/0:3,0:3:6.02:0,6,120	0/0:28,0:26:26.41:0,26,686	0/0:29,0:27:63.22:0,63,1330	0/0:25,0:25:51.16:0,51,1046	0/0:21,0:19:47.22:0,47,982	0/0:16,0:15:29.09:0,29,629
chr10	74179939	.	CA	C	2266.80	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.378;DP=788;FS=1.620;HRun=1;HaplotypeScore=80.5538;InbreedingCoeff=0.9996;MQ=91.72;MQ0=0;MQRankSum=1.824;QD=35.98;ReadPosRankSum=-2.780;VQSLOD=2.9253;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1728	0/0:11,0:11:32.94:0,33,467	0/0:39,0:39:99:0,110,1606	0/0:26,0:26:41.20:0,41,964	0/0:35,0:35:99:0,102,1590	0/0:21,0:21:63.20:0,63,983	0/0:31,0:31:90.29:0,90,1414	1/1:0,39:39:99:1468,114,0	0/0:34,0:34:99:0,102,1575	0/0:31,0:31:93.29:0,93,1400	0/0:20,0:20:60.19:0,60,927	0/0:27,0:27:81.26:0,81,1270	0/0:33,0:33:99:0,99,1533	0/0:30,0:30:90.31:0,90,1431	0/0:23,0:23:66.21:0,66,1027	0/0:22,0:22:66.18:0,66,980	0/0:37,0:37:99:0,111,1735	1/1:0,24:24:66.22:920,66,0	0/0:23,0:23:66.15:0,66,967	0/0:27,0:27:81.27:0,81,1267	0/0:39,0:39:99:0,111,1722	0/0:24,0:24:72.25:0,72,1147	0/0:25,0:25:75.26:0,75,1197	0/0:39,0:39:99:0,117,1743	0/0:25,0:25:75.24:0,75,1170	0/0:25,0:25:74.97:0,75,1137	0/0:31,0:31:93.27:0,93,1392	0/0:10,0:10:30.08:0,30,451
chr10	74184511	.	GA	G	3565.04	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=12.996;DP=642;FS=23.278;HRun=10;HaplotypeScore=64.4118;InbreedingCoeff=0.9191;MQ=68.68;MQ0=0;MQRankSum=-0.290;QD=20.14;ReadPosRankSum=3.169;VQSLOD=2.6786;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:65.98:573,66,0	0/0:8,0:9:20.89:0,21,213	0/1:11,0:10:3.36:3,0,16	0/0:11,0:10:13.15:0,13,67	0/0:42,0:42:96.26:0,96,1062	0/0:17,0:17:48.11:0,48,522	0/0:14,0:14:33.09:0,33,365	0/0:26,2:29:19.90:0,20,652	1/1:3,13:16:38.99:339,39,0	0/0:33,0:33:81.21:0,81,887	0/0:26,0:26:63.17:0,63,697	1/1:3,13:16:38.99:339,39,0	1/1:0,21:21:62.99:547,63,0	0/0:16,0:16:48.11:0,48,522	0/0:19,0:19:51.14:0,51,564	0/0:16,0:16:19.10:0,19,431	0/0:27,0:28:81:0,81,855	0/0:26,1:26:40.12:0,40,664	0/0:19,0:19:51.10:0,51,539	0/0:41,0:41:99:0,117,1284	0/0:13,0:13:39.09:0,39,420	1/1:4,20:24:8.48:462,8,0	1/1:2,22:24:56.99:495,57,0	1/1:3,34:37:92.97:807,93,0	0/0:29,0:28:79.77:0,80,867	0/0:33,0:33:61.63:0,62,897	0/0:32,0:31:90.24:0,90,989	0/0:11,0:11:33.09:0,33,365
chr10	74185710	.	GTT	G	4159.77	PASS	AB=0.538;AC=15;AF=0.268;AN=56;BaseQRankSum=6.817;DP=738;FS=0.714;HRun=13;HaplotypeScore=103.7358;InbreedingCoeff=0.8605;MQ=76.95;MQ0=1;MQRankSum=-0.728;QD=19.35;ReadPosRankSum=6.746;VQSLOD=2.8579;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,47:52:99:1138,114,0	0/0:13,0:13:33.08:0,33,440	0/0:26,0:25:37.83:0,38,485	0/0:28,1:26:10.84:0,11,190	0/0:31,0:33:83.77:0,84,1044	0/0:26,0:27:54.09:0,54,687	0/0:27,0:30:71.72:0,72,990	0/0:12,2:37:0.22:0,0,122	1/1:5,13:19:35.76:332,36,0	0/0:31,0:32:56.64:0,57,729	0/0:25,0:27:65.58:0,66,801	1/1:3,26:29:69.08:669,69,0	1/1:7,20:26:57.03:552,57,0	0/0:23,0:23:60.16:0,60,801	0/0:25,0:25:56.59:0,57,696	0/0:22,0:23:59.67:0,60,800	0/0:22,0:24:58.98:0,59,737	0/1:2,2:14:27.24:27,0,55	0/0:20,0:21:44.61:0,45,564	0/0:24,0:28:73.66:0,74,910	0/0:22,0:24:53.14:0,53,693	1/1:1,19:20:42.01:407,42,0	1/1:1,16:17:30.03:291,30,0	1/1:4,31:37:58.58:743,59,0	0/0:18,0:20:50.57:0,51,646	0/0:31,0:32:83.70:0,84,1068	0/0:32,0:35:91.69:0,92,1119	0/0:9,0:9:24.07:0,24,329
chr10	74185999	.	GAA	G	954.51	PASS	AB=0.798;AC=9;AF=0.161;AN=56;BaseQRankSum=1.553;DP=601;FS=2.546;HRun=14;HaplotypeScore=87.4980;InbreedingCoeff=0.5674;MQ=62.38;MQ0=5;MQRankSum=0.516;QD=6.24;ReadPosRankSum=1.198;VQSLOD=0.6185;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:37.10:0,37,432	0/0:4,0:5:14.54:0,15,177	0/1:33,1:16:18.15:18,0,49	0/0:21,0:10:0.16:0,0,80	0/0:25,0:27:72.14:0,72,925	0/0:11,0:13:29.31:0,29,335	0/0:19,0:19:38.52:0,39,463	0/0:18,0:25:38.53:0,39,175	0/0:20,1:20:47.60:0,48,615	1/1:8,15:25:38.35:374,38,0	1/1:13,16:31:27.85:331,28,0	0/0:17,0:19:50.52:0,51,651	0/0:19,0:20:50.65:0,51,664	0/0:19,1:20:17.19:0,17,522	0/0:25,0:27:60.18:0,60,803	0/0:14,0:16:44.20:0,44,521	0/0:27,0:28:60.89:0,61,749	0/1:3,1:14:7.29:7,0,40	0/0:17,0:19:36.79:0,37,426	0/0:25,0:25:51.10:0,51,562	0/0:11,0:10:29.56:0,30,336	0/0:13,0:14:38.62:0,39,513	0/0:28,1:31:63.06:0,63,764	0/1:16,2:19:10.89:11,0,459	1/1:11,17:30:16.74:366,17,0	0/0:26,0:27:16.37:0,16,494	0/0:26,0:25:57.15:0,57,656	0/0:10,0:9:18.02:0,18,196
chr10	74188398	.	CTGTG	C	1807.29	PASS	AB=0.960;AC=15;AF=0.278;AN=54;BaseQRankSum=5.713;DP=671;FS=2.910;HRun=0;HaplotypeScore=113.5107;InbreedingCoeff=0.8583;MQ=68.88;MQ0=10;MQRankSum=-0.257;QD=10.63;ReadPosRankSum=2.940;VQSLOD=3.1950;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,8:28:21.06:312,21,0	0/0:3,0:4:8.77:0,9,155	./.	0/0:42,0:28:3.01:0,3,71	0/0:24,0:27:41.88:0,42,815	0/0:25,0:26:41.88:0,42,857	0/0:18,0:19:29.80:0,30,560	0/0:27,0:26:24.08:0,24,477	1/1:10,14:24:26.21:424,26,0	0/0:15,0:20:15.05:0,15,266	0/0:8,0:14:18.06:0,18,352	1/1:11,8:20:24.05:359,24,0	1/1:10,7:18:9.02:123,9,0	0/0:25,0:25:30.10:0,30,647	0/0:28,0:29:38.85:0,39,792	0/1:23,1:23:2.51:3,0,635	0/0:22,0:22:36.11:0,36,769	0/0:22,0:21:27.06:0,27,463	0/0:25,0:27:38.59:0,39,646	0/0:13,0:13:18.06:0,18,396	0/0:34,0:39:47.63:0,48,879	1/1:8,7:15:15.52:237,16,0	1/1:8,10:18:17.95:253,18,0	1/1:15,8:23:18.53:285,19,0	0/0:38,0:47:66.68:0,67,1192	0/0:18,0:20:26.82:0,27,443	0/0:31,0:31:33.07:0,33,616	0/0:7,0:7:6:0,6,88
chr10	74190785	.	C	CT	799.23	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.086;DP=595;FS=1.504;HRun=9;HaplotypeScore=69.5495;InbreedingCoeff=0.9355;MQ=83.45;MQ0=1;MQRankSum=-1.084;QD=19.98;ReadPosRankSum=-3.876;VQSLOD=2.7088;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:59.86:0,60,504	0/0:13,0:13:32.98:0,33,286	0/0:26,0:25:42.68:0,43,350	0/0:17,0:18:5.39:0,5,187	0/0:23,0:23:30.08:0,30,392	0/0:16,0:16:29.95:0,30,257	0/0:20,0:20:50.97:0,51,438	1/1:6,21:27:57.14:622,57,0	0/0:25,0:25:59.98:0,60,520	0/0:26,0:26:53.95:0,54,468	0/0:17,0:17:32.93:0,33,277	0/0:23,0:23:59.98:0,60,521	0/0:25,0:25:61.15:0,61,539	0/0:26,0:26:74.97:0,75,651	0/0:25,0:25:56.92:0,57,491	0/0:23,0:23:50.98:0,51,443	0/0:21,0:21:62.99:0,63,547	1/1:1,12:13:27.07:299,27,0	0/0:17,0:17:29.96:0,30,257	0/0:19,0:19:44.93:0,45,383	0/0:14,0:13:29.97:0,30,257	0/0:17,0:18:41:0,41,344	0/0:18,0:18:16.97:0,17,150	0/0:26,0:26:71.97:0,72,625	0/0:17,0:17:26.94:0,27,234	0/0:21,0:21:41.94:0,42,365	0/0:32,0:32:77.96:0,78,677	0/0:15,0:15:38.99:0,39,338
chr10	74194654	.	TCC	T	732.90	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.165;DP=433;FS=11.715;HRun=10;HaplotypeScore=66.4115;InbreedingCoeff=0.9219;MQ=78.97;MQ0=0;MQRankSum=0.238;QD=15.59;ReadPosRankSum=2.375;VQSLOD=0.7849;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:50.59:0,51,671	0/0:5,0:5:6.02:0,6,95	0/0:18,0:17:34.75:0,35,385	0/0:21,0:18:35.20:0,35,361	0/0:25,0:25:56.70:0,57,834	0/0:11,0:11:24.06:0,24,340	0/0:13,0:13:36.12:0,36,568	1/1:11,13:26:19.63:351,20,0	0/0:10,0:12:32.58:0,33,446	0/0:11,0:14:24.05:0,24,283	0/0:10,0:12:20.53:0,21,209	0/0:12,0:12:30.57:0,31,477	0/0:11,0:11:30.10:0,30,468	0/0:11,0:11:18.84:0,19,418	0/0:14,0:14:39.09:0,39,552	0/0:15,0:15:39.12:0,39,585	0/0:11,0:11:33.09:0,33,470	1/1:0,21:21:45.12:502,45,0	0/0:8,0:9:23.50:0,24,290	0/0:24,0:24:39.11:0,39,566	0/0:18,0:18:35.90:0,36,471	0/0:15,0:16:41.59:0,42,559	0/0:15,0:16:35.59:0,36,507	0/0:14,0:14:36.09:0,36,523	0/0:7,0:7:12.02:0,12,133	0/0:13,0:14:35.61:0,36,531	0/0:19,0:21:46.99:0,47,632	0/0:19,0:19:48.11:0,48,706
chr10	74195106	.	AAAACAAAC	A	7604.52	PASS	AB=0.769;AC=23;AF=0.411;AN=56;BaseQRankSum=6.861;DP=802;FS=0.396;HRun=0;HaplotypeScore=224.5972;InbreedingCoeff=0.8353;MQ=59.40;MQ0=6;MQRankSum=-13.779;QD=22.63;ReadPosRankSum=-2.100;VQSLOD=4.0070;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,21:36:35.94:766,36,0	0/0:12,0:12:21.07:0,21,818	0/0:25,0:19:6.49:0,6,209	0/0:27,0:20:9.03:0,9,207	0/0:37,0:37:66.23:0,66,2648	0/0:24,0:24:39.12:0,39,1445	0/0:29,0:29:51.16:0,51,1843	1/1:21,0:29:9.60:68,10,0	1/1:12,19:31:54.19:1279,54,0	1/1:17,12:29:39.13:978,39,0	1/1:8,14:22:29.78:435,30,0	1/1:9,20:29:51.17:1277,51,0	1/1:17,15:32:42.08:997,42,0	0/0:35,0:35:78.27:0,78,3016	0/0:46,0:47:93.28:0,93,3367	0/0:29,1:30:7.32:0,7,2940	0/0:30,0:30:72.25:0,72,2772	0/1:14,0:20:99:261,0,102	0/0:13,0:22:37.94:0,38,1143	0/0:12,0:34:69.24:0,69,2281	0/0:16,0:36:60.21:0,60,1960	1/1:16,11:27:29.89:476,30,0	1/1:16,9:25:20.54:334,21,0	1/1:19,15:34:1.65:89,2,0	1/1:5,17:22:32.98:645,33,0	0/0:17,0:38:5.94:0,6,2473	0/0:11,0:29:45.17:0,45,1404	0/0:5,0:9:12.04:0,12,419
chr10	74198490	.	T	TAC	2430.33	PASS	AB=0.714;AC=13;AF=0.232;AN=56;BaseQRankSum=-3.014;DP=590;FS=3.114;HRun=0;HaplotypeScore=90.4218;InbreedingCoeff=0.2405;MQ=64.22;MQ0=13;MQRankSum=-0.935;QD=11.25;ReadPosRankSum=-0.447;VQSLOD=3.4170;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:14,18:33:51.83:173,0,52	0/0:8,0:8:15.04:0,15,177	0/0:25,0:13:4.53:0,5,41	0/0:41,0:12:1.83:0,2,33	0/0:13,0:13:26.97:0,27,299	0/0:25,0:25:58.70:0,59,656	0/0:33,0:34:29.56:0,30,566	0/1:17,0:16:12.29:158,0,12	0/1:7,15:21:17.16:220,0,17	0/0:20,0:20:37.33:0,37,405	0/0:14,0:14:15.04:0,15,177	0/1:8,13:21:16.30:219,0,16	0/1:3,10:14:17.47:220,0,17	0/0:20,0:22:35.41:0,35,378	0/0:12,0:12:20.69:0,21,205	0/0:20,0:20:39.12:0,39,460	0/0:26,0:27:48.40:0,48,522	1/1:21,9:30:31.95:565,32,0	0/0:12,0:13:4.80:0,5,164	0/0:13,0:14:26.91:0,27,297	0/0:49,0:48:92.29:0,92,1056	0/1:8,11:19:17.20:219,0,17	1/1:8,1:10:8.91:96,9,0	1/1:6,20:26:45.15:713,45,0	0/0:10,0:12:20.72:0,21,205	0/1:22,1:23:13.19:13,0,296	0/0:17,0:18:38.79:0,39,435	0/0:6,0:6:11.95:0,12,123
chr10	74198512	.	G	GAC	1081.73	PASS	AB=0.974;AC=5;AF=0.089;AN=56;BaseQRankSum=2.335;DP=673;FS=27.444;HRun=0;HaplotypeScore=101.1266;InbreedingCoeff=0.6960;MQ=58.22;MQ0=15;MQRankSum=-3.023;QD=11.76;ReadPosRankSum=-0.764;VQSLOD=1.3318;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:36,1:37:4.44:4,0,431	0/0:8,0:8:20.65:0,21,228	0/0:38,0:14:32.63:0,33,325	0/0:50,0:16:10.82:0,11,238	0/0:14,0:15:35.72:0,36,409	0/0:24,0:24:51.99:0,52,580	0/0:37,0:37:69.17:0,69,804	1/1:13,8:21:27.49:323,27,0	0/0:24,0:23:25.07:0,25,274	0/0:21,0:21:44.60:0,45,506	0/0:10,0:10:24.05:0,24,267	0/0:25,0:25:11.62:0,12,265	0/0:13,0:13:0.50:0,0,99	0/0:19,0:20:32.61:0,33,375	0/0:20,0:20:41.71:0,42,481	0/0:17,0:17:39.12:0,39,472	0/0:30,0:30:65.21:0,65,737	1/1:23,10:33:62.73:878,63,0	0/0:23,0:22:29.34:0,29,290	0/0:21,0:21:33.10:0,33,399	0/0:60,0:59:99:0,132,1524	0/0:18,0:18:20.11:0,20,174	0/0:10,0:10:12.26:0,12,104	0/0:32,0:32:18.17:0,18,296	0/0:14,0:14:29.74:0,30,323	0/0:27,0:26:49.68:0,50,562	0/0:18,0:18:38.79:0,39,442	0/0:6,0:6:12.04:0,12,145
chr10	74198591	.	G	GCACA	1908.74	PASS	AB=0.977;AC=5;AF=0.089;AN=56;BaseQRankSum=-4.096;DP=684;FS=12.570;HRun=0;HaplotypeScore=130.5178;InbreedingCoeff=0.6313;MQ=70.70;MQ0=4;MQRankSum=-5.378;QD=20.52;ReadPosRankSum=-2.770;VQSLOD=2.3413;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.27:0,84,1377	0/0:12,0:13:32.39:0,32,533	0/0:44,0:29:2.50:0,3,582	0/1:41,0:28:16.38:16,0,315	0/0:11,0:11:30.09:0,30,481	0/0:15,0:15:36.11:0,36,582	0/0:35,0:37:75.95:0,76,1346	1/1:11,10:21:42.10:913,42,0	0/0:18,0:19:45.13:0,45,695	0/0:6,0:8:18.05:0,18,280	0/0:11,0:11:30.09:0,30,479	0/0:30,0:31:72.24:0,72,1192	0/0:14,0:15:36.12:0,36,585	0/0:24,0:25:69.23:0,69,1138	0/0:26,0:26:60.20:0,60,991	0/0:13,0:13:39.10:0,39,603	0/0:35,0:34:84.27:0,84,1377	1/1:14,15:29:3.27:1096,3,0	0/0:21,0:22:43.66:0,44,626	0/0:20,0:21:51.15:0,51,811	0/0:77,0:82:99:0,181,2883	0/0:19,0:19:39.13:0,39,658	0/0:13,0:13:33.11:0,33,554	0/0:39,0:41:93.27:0,93,1517	0/0:13,0:13:27.09:0,27,456	0/0:21,0:22:59:0,59,944	0/0:14,0:15:29.83:0,30,440	0/0:8,0:8:18.06:0,18,304
chr10	74198757	.	GCACA	G	1593.49	PASS	AB=0.964;AC=14;AF=0.259;AN=54;BaseQRankSum=3.289;DP=577;FS=0.628;HRun=0;HaplotypeScore=101.0373;InbreedingCoeff=0.6832;MQ=60.90;MQ0=16;MQRankSum=0.223;QD=9.32;ReadPosRankSum=3.583;VQSLOD=2.4962;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:20.19:20,0,557	0/0:9,0:9:18.31:0,18,433	./.	0/0:36,0:6:3.01:0,3,65	0/0:15,0:15:24.08:0,24,509	0/0:12,0:14:26.83:0,27,565	0/1:24,1:25:5.50:5,0,715	0/0:21,0:21:34.82:0,35,528	1/1:5,16:22:18.83:557,19,0	0/0:20,0:27:32.34:0,32,453	0/0:5,0:9:6.02:0,6,105	1/1:11,13:25:14.84:373,15,0	1/1:8,11:22:25.10:379,25,0	0/0:19,0:28:44.09:0,44,816	0/0:16,0:18:30.10:0,30,722	0/0:15,0:15:24.08:0,24,549	0/0:25,0:29:48.33:0,48,994	0/0:20,0:26:37.15:0,37,561	0/0:9,0:9:6.02:0,6,142	0/0:9,0:9:15.04:0,15,301	0/0:47,0:48:65.21:0,65,1229	1/1:7,5:12:5.89:96,6,0	1/1:3,7:11:6.02:96,6,0	1/1:13,12:25:14.84:240,15,0	0/0:10,0:15:5.95:0,6,87	0/0:20,0:20:29.12:0,29,573	0/0:9,0:9:14.76:0,15,225	0/0:7,0:6:12:0,12,128
chr10	74201537	.	AT	A	626.49	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.322;DP=523;FS=0.000;HRun=11;HaplotypeScore=58.5055;InbreedingCoeff=0.8381;MQ=67.81;MQ0=0;MQRankSum=0.028;QD=14.92;ReadPosRankSum=-0.274;VQSLOD=3.8595;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:35:93.43:0,93,957	0/0:11,0:11:27.07:0,27,287	0/0:9,0:8:11.05:0,11,96	0/0:7,0:7:6.02:0,6,64	0/0:28,0:28:63.16:0,63,672	0/0:14,0:14:33.08:0,33,352	0/0:15,0:18:40.91:0,41,429	1/1:10,16:25:50.50:403,50,0	0/0:12,0:12:33.07:0,33,344	0/0:18,0:18:42.09:0,42,433	0/0:20,1:21:54.10:0,54,563	0/0:18,0:18:44.96:0,45,449	0/0:11,0:11:30.04:0,30,303	0/0:16,0:18:35.88:0,36,352	0/0:26,1:28:44.36:0,44,637	0/0:23,0:25:38.72:0,39,363	0/0:20,0:21:53.92:0,54,539	1/1:0,16:16:41.95:344,42,0	0/0:19,0:19:47.90:0,48,481	0/0:21,1:22:27.71:0,28,478	0/0:19,0:19:39.53:0,40,405	0/0:13,0:14:23.18:0,23,260	0/0:12,0:12:24.06:0,24,256	0/0:30,0:30:81.20:0,81,864	0/0:11,0:13:32.92:0,33,334	0/0:18,2:21:1.70:0,2,413	0/0:18,1:19:23.42:0,23,429	0/0:15,0:17:44.60:0,45,432
chr10	74203479	.	GTT	G	996.96	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.648;DP=546;FS=2.435;HRun=8;HaplotypeScore=64.3042;InbreedingCoeff=0.9909;MQ=71.97;MQ0=0;MQRankSum=-3.746;QD=28.48;ReadPosRankSum=-2.487;VQSLOD=3.1619;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:26:60.39:0,60,226	0/0:5,0:5:15.05:0,15,254	0/0:16,0:15:36.03:0,36,517	0/0:10,0:10:27.09:0,27,441	0/0:33,0:33:90.30:0,90,1496	0/0:13,0:13:36.10:0,36,558	0/0:17,0:17:51.16:0,51,816	1/1:1,20:21:60.18:716,60,0	0/0:24,0:24:66.23:0,66,1116	0/0:25,0:26:66.22:0,66,1083	0/0:17,0:17:51.17:0,51,856	0/0:15,0:15:45.15:0,45,759	0/0:18,0:18:54.18:0,54,906	0/0:22,0:22:63.20:0,63,1038	0/0:20,0:20:57.19:0,57,933	0/0:24,0:24:72.25:0,72,1214	0/0:19,0:19:51.17:0,51,862	1/1:1,13:14:33.10:402,33,0	0/0:22,0:22:45.13:0,45,731	0/0:28,0:29:84.28:0,84,1399	0/0:18,0:18:54.18:0,54,905	0/0:13,0:13:39.12:0,39,631	0/0:23,0:23:63.19:0,63,1036	0/0:17,0:17:51.16:0,51,832	0/0:23,0:23:63.21:0,63,1032	0/0:16,0:16:45.15:0,45,761	0/0:33,0:32:96.33:0,96,1619	0/0:12,0:12:33.11:0,33,558
chr10	74203872	.	GT	G	360.92	PASS	AB=0.990;AC=5;AF=0.089;AN=56;BaseQRankSum=4.187;DP=449;FS=4.372;HRun=1;HaplotypeScore=51.1501;InbreedingCoeff=0.3627;MQ=71.07;MQ0=0;MQRankSum=-1.682;QD=5.47;ReadPosRankSum=0.161;VQSLOD=0.4832;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,1:33:90.53:91,0,119	0/0:7,0:7:21.01:0,21,259	0/0:11,0:10:15.40:0,15,234	0/1:6,0:6:14.91:15,0,57	0/0:14,0:14:42.03:0,42,503	0/0:20,1:21:43.15:0,43,834	0/0:17,0:17:37.71:0,38,480	1/1:19,2:21:26.27:345,26,0	0/0:18,0:18:54.11:0,54,742	0/0:15,0:15:36:0,36,357	0/0:10,0:10:20.76:0,21,178	0/0:13,0:13:39.05:0,39,464	0/0:17,0:17:50.02:0,50,676	0/0:14,0:14:42.07:0,42,567	0/0:26,0:26:78.23:0,78,1134	0/0:22,0:22:66.21:0,66,986	0/0:23,0:23:69.18:0,69,969	0/1:6,0:6:9.23:33,0,9	0/0:13,0:13:35.93:0,36,386	0/0:21,0:21:60.04:0,60,732	0/0:13,0:13:39.13:0,39,584	0/0:19,0:19:57.13:0,57,769	0/0:17,0:17:32.41:0,32,535	0/0:13,0:13:39.07:0,39,559	0/0:17,0:17:35.62:0,36,309	0/0:18,0:18:51.10:0,51,645	0/0:21,0:21:31.77:0,32,729	0/0:3,0:3:9.03:0,9,131
chr10	74203873	.	TC	T	523.89	PASS	AB=0.915;AC=6;AF=0.107;AN=56;BaseQRankSum=4.867;DP=442;FS=0.682;HRun=10;HaplotypeScore=49.2056;InbreedingCoeff=0.2460;MQ=72.21;MQ0=0;MQRankSum=-0.366;QD=6.16;ReadPosRankSum=1.705;VQSLOD=0.6825;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,25:33:47.48:574,47,0	0/0:7,0:7:12.03:0,12,133	0/1:12,0:11:3.32:3,0,126	0/1:6,0:6:12.04:12,0,24	0/0:13,0:13:27.07:0,27,299	0/0:21,0:21:31.30:0,31,571	0/1:14,3:17:22.03:22,0,234	0/0:21,0:21:7.17:0,7,178	0/0:19,0:19:48.11:0,48,513	0/0:6,0:13:26.05:0,26,166	0/0:5,0:10:14.52:0,15,93	0/0:12,0:12:21:0,21,204	0/0:17,0:17:42.10:0,42,454	0/0:13,0:14:41.94:0,42,442	0/0:25,0:25:72.19:0,72,789	0/0:22,0:22:66.15:0,66,713	0/0:23,0:23:60.15:0,60,657	0/0:6,0:6:12.03:0,12,133	0/0:13,0:13:15.04:0,15,165	0/0:20,0:20:39.11:0,39,431	0/0:13,0:13:39.06:0,39,410	0/0:19,0:19:47.34:0,47,505	0/1:13,4:17:36.05:36,0,321	0/0:11,0:11:33.09:0,33,365	0/0:8,0:16:17.36:0,17,113	0/0:18,0:18:36.10:0,36,398	0/0:21,0:21:44.99:0,45,479	0/0:3,0:3:8.76:0,9,78
chr10	74205732	.	TG	T	1730.83	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.388;DP=631;FS=3.500;HRun=1;HaplotypeScore=63.8489;InbreedingCoeff=0.9962;MQ=68.32;MQ0=6;MQRankSum=-1.114;QD=36.06;ReadPosRankSum=0.090;VQSLOD=3.7091;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1809	0/0:7,0:7:21.07:0,21,336	0/0:28,0:16:24.74:0,25,654	0/0:26,0:17:38.76:0,39,644	0/0:20,0:20:54.08:0,54,799	0/0:20,0:20:60.20:0,60,956	0/0:18,0:18:54.17:0,54,839	1/1:0,30:30:90.28:1225,90,0	0/0:24,0:24:72.18:0,72,1115	0/0:19,0:19:57.19:0,57,889	0/0:11,0:11:30.09:0,30,452	0/0:15,0:15:42.13:0,42,642	0/0:30,0:30:87.30:0,87,1381	0/0:23,0:23:66.23:0,66,1054	0/0:28,0:28:84.26:0,84,1313	0/0:24,0:24:72.22:0,72,1124	0/0:28,0:28:84.29:0,84,1336	1/1:0,18:18:45.15:627,45,0	0/0:19,0:18:54.13:0,54,806	0/0:22,0:22:66.22:0,66,1030	0/0:20,0:20:60.16:0,60,906	0/0:23,0:23:65.55:0,66,1014	0/0:17,0:17:48.14:0,48,740	0/0:35,0:35:99:0,102,1630	0/0:28,0:28:84.29:0,84,1326	0/0:24,0:24:69.20:0,69,1057	0/0:26,0:26:78.27:0,78,1247	0/0:9,0:9:27.09:0,27,427
chr10	74207079	.	T	TGGA	2382.38	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.782;DP=713;FS=2.017;HRun=0;HaplotypeScore=103.2426;InbreedingCoeff=0.9699;MQ=94.04;MQ0=0;MQRankSum=-5.119;QD=42.54;ReadPosRankSum=-2.228;VQSLOD=4.5556;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,105,1649	0/0:10,0:10:27.09:0,27,434	0/0:29,0:29:72.23:0,72,1117	0/0:39,0:39:86.65:0,87,1414	0/0:24,0:24:66.21:0,66,1036	0/0:20,0:20:54.18:0,54,861	0/0:35,0:35:96.33:0,96,1534	1/1:7,23:32:75.23:1511,75,0	0/0:24,0:24:69.24:0,69,1109	0/0:29,0:29:69.21:0,69,1045	0/0:16,0:16:42.14:0,42,665	0/0:31,0:31:90.30:0,90,1418	0/0:21,0:21:63.20:0,63,981	0/0:26,0:26:72.23:0,72,1133	0/0:27,0:27:75.24:0,75,1182	0/0:23,0:23:69.21:0,69,1062	0/0:36,0:36:99:0,105,1687	1/1:6,17:24:45.15:993,45,0	0/0:31,0:31:78.25:0,78,1229	0/0:18,0:18:45.14:0,45,699	0/0:39,0:39:99:0,105,1631	0/0:24,0:24:66.23:0,66,1060	0/0:15,0:15:42.13:0,42,650	0/0:29,0:29:84.27:0,84,1317	0/0:20,0:20:51.16:0,51,796	0/0:28,0:28:69.22:0,69,1087	0/0:19,0:19:54.17:0,54,843	0/0:4,0:4:8.96:0,9,114
chr10	74208665	.	A	AGT	415.59	PASS	AB=1.000;AC=16;AF=0.400;AN=40;BaseQRankSum=-0.011;DP=545;FS=6.374;HRun=0;HaplotypeScore=94.0089;InbreedingCoeff=0.3278;MQ=64.34;MQ0=13;MQRankSum=0.676;QD=1.85;ReadPosRankSum=-0.543;VQSLOD=0.7653;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:14.83:176,15,0	./.	./.	./.	0/0:18,0:20:11.86:0,12,108	0/0:9,0:9:3.01:0,3,31	0/0:23,0:23:5.97:0,6,63	./.	0/0:10,0:10:2.74:0,3,14	1/1:15,0:15:5.58:77,6,0	1/1:15,0:15:3:25,3,0	0/0:13,0:12:8.52:0,9,42	0/0:19,0:19:5.68:0,6,28	1/1:12,3:17:8.52:96,9,0	0/0:22,0:20:9.02:0,9,94	0/0:18,0:18:5.75:0,6,63	0/1:26,0:26:18.41:18,0,34	1/1:13,0:12:5.72:54,6,0	./.	./.	0/1:55,0:54:25.91:34,0,26	0/0:13,0:13:1.22:0,1,2	./.	0/1:24,0:23:0:0,0,0	0/1:18,0:18:25.44:37,0,25	1/1:18,0:18:4.72:32,5,0	0/0:15,0:15:5.25:0,5,62	./.
chr10	74208713	.	TGTGTGTGG	T	869.80	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=2.951;DP=593;FS=15.957;HRun=0;HaplotypeScore=126.9679;InbreedingCoeff=0.8729;MQ=61.67;MQ0=37;MQRankSum=0.119;QD=10.35;ReadPosRankSum=1.202;VQSLOD=1.7694;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:53.70:0,54,1028	0/0:2,0:2:5.98:0,6,49	0/0:28,0:17:31.01:0,31,387	0/0:38,0:18:40.28:0,40,451	0/0:22,0:21:54.03:0,54,1130	0/0:11,0:10:23.73:0,24,502	0/0:29,0:29:77.44:0,77,1196	0/0:24,0:16:38.35:0,38,301	1/1:1,15:16:2.55:87,3,0	0/0:16,0:16:46.61:0,47,880	0/0:12,0:11:26.99:0,27,575	1/1:1,16:16:8.96:264,9,0	1/1:1,17:18:6.02:158,6,0	0/0:24,0:23:48.03:0,48,766	0/0:29,0:24:56.10:0,56,981	0/0:24,0:24:63.88:0,64,1255	0/0:36,0:35:84.46:0,84,2146	0/0:23,0:18:40.28:0,40,726	0/0:14,0:14:41.60:0,42,504	0/0:19,0:19:33.88:0,34,966	0/0:50,0:47:85.06:0,85,2492	1/1:16,0:15:33.44:323,33,0	./.	1/1:17,0:16:23.88:192,24,0	0/0:15,0:15:39.11:0,39,1164	0/0:14,0:11:36.09:0,36,819	0/0:18,0:17:19.10:0,19,752	0/0:3,0:3:9.02:0,9,219
chr10	74208814	.	GGT	G	160.20	PASS	AB=0.964;AC=11;AF=0.196;AN=56;BaseQRankSum=8.908;DP=625;FS=0.699;HRun=0;HaplotypeScore=107.5285;InbreedingCoeff=0.4318;MQ=62.75;MQ0=7;MQRankSum=-3.854;QD=1.19;ReadPosRankSum=2.342;VQSLOD=1.2211;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:36:41.05:0,41,1104	0/0:13,0:13:33.11:0,33,534	0/0:25,0:16:29.63:0,30,382	0/0:32,0:17:26.96:0,27,303	0/0:18,0:18:42.12:0,42,644	0/1:13,1:13:1.06:1,0,485	0/0:30,0:31:58:0,58,1049	0/0:40,0:38:19.57:0,20,179	0/1:18,0:18:0.16:57,0,0	0/0:29,0:29:79.13:0,79,1163	0/0:17,0:17:51.16:0,51,802	0/1:15,0:15:21.34:21,0,33	1/1:20,0:20:28.81:125,29,0	0/0:13,0:13:39.10:0,39,599	0/0:27,0:27:66.22:0,66,1067	0/0:24,1:25:13.98:0,14,719	0/0:28,0:28:78.15:0,78,1155	0/1:21,0:20:25.65:26,0,199	0/0:21,0:19:32.91:0,33,378	0/0:22,0:22:48.15:0,48,760	0/0:42,0:42:99:0,105,1706	0/0:16,0:16:0.24:0,0,1	1/1:7,0:7:2.74:12,3,0	1/1:24,0:24:8.23:37,8,0	0/0:15,0:15:45.08:0,45,658	0/0:25,0:25:66.17:0,66,1029	0/1:14,2:16:26.21:26,0,625	0/0:14,0:14:2.37:0,2,518
chr10	74208829	.	GTA	G	2234.76	PASS	AB=0.864;AC=15;AF=0.268;AN=56;BaseQRankSum=13.572;DP=693;FS=3.444;HRun=0;HaplotypeScore=117.8027;InbreedingCoeff=0.8777;MQ=56.79;MQ0=13;MQRankSum=-7.549;QD=13.22;ReadPosRankSum=-3.529;VQSLOD=2.9635;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:79.06:0,79,1371	0/0:12,0:12:36.08:0,36,571	0/0:41,0:15:23.55:0,24,302	0/0:45,0:16:15.28:0,15,227	0/0:14,0:14:42.09:0,42,724	0/0:16,0:15:31.65:0,32,615	0/0:30,0:30:63.55:0,64,1223	1/1:25,5:29:41.66:461,42,0	1/1:10,7:17:44.84:369,45,0	0/0:36,0:36:88.73:0,89,1491	0/0:17,0:17:48.15:0,48,869	1/1:14,5:19:34.08:264,34,0	1/1:11,12:23:59.73:486,60,0	0/0:18,0:18:47.15:0,47,756	0/0:25,0:25:69.10:0,69,1183	0/0:23,0:23:50.69:0,51,985	0/0:32,0:32:88.80:0,89,1437	0/1:16,3:19:39.40:279,0,39	0/0:21,0:17:37.44:0,37,437	0/0:18,0:18:51.13:0,51,880	0/0:52,0:52:99:0,150,2299	1/1:16,5:22:31.72:250,32,0	1/1:0,11:11:3.94:28,4,0	1/1:18,10:28:35.86:292,36,0	0/0:15,0:15:42.11:0,42,721	0/0:30,0:30:87.17:0,87,1336	0/0:17,0:17:22.29:0,22,770	0/0:18,0:18:40.06:0,40,688
chr10	74208837	.	GTGTGTA	G	2509.59	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=11.605;DP=711;FS=10.684;HRun=0;HaplotypeScore=169.3196;InbreedingCoeff=0.8066;MQ=61.89;MQ0=14;MQRankSum=-6.637;QD=12.80;ReadPosRankSum=-4.495;VQSLOD=0.9791;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:40:96.28:0,96,2936	0/0:12,0:12:27.09:0,27,803	0/1:47,0:12:2.60:3,0,328	0/0:56,0:23:24.37:0,24,397	0/0:12,0:12:36.12:0,36,1246	0/0:14,0:13:36.11:0,36,1105	0/0:33,0:33:73.30:0,73,2402	0/1:27,0:26:99:159,0,181	1/1:15,2:17:38.60:546,39,0	0/0:36,0:36:93.32:0,93,2875	0/0:16,0:16:48.11:0,48,1400	1/1:20,0:20:29.89:376,30,0	1/1:21,3:24:56.52:832,57,0	0/0:18,0:18:51.16:0,51,1544	0/0:25,0:25:69.24:0,69,2177	0/0:25,0:25:66.21:0,66,1949	0/0:34,0:34:94.31:0,94,3026	0/0:17,0:17:38.74:0,39,598	0/0:21,0:16:29.54:0,30,911	0/0:18,0:18:51.17:0,51,1610	0/0:58,0:58:99:0,159,4554	1/1:19,2:21:29.65:264,30,0	1/1:10,0:10:3.48:68,3,0	1/1:29,1:30:38.70:446,39,0	0/0:16,0:16:48.15:0,48,1391	0/0:30,0:30:81.19:0,81,2402	0/0:17,0:17:45.15:0,45,1486	0/0:15,0:15:42.11:0,42,1207
chr10	74208839	.	GTGTA	G	2033.31	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=12.690;DP=717;FS=10.037;HRun=0;HaplotypeScore=147.7473;InbreedingCoeff=0.7195;MQ=62.55;MQ0=14;MQRankSum=-8.172;QD=9.55;ReadPosRankSum=-5.145;VQSLOD=0.3913;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:40:96.28:0,96,2332	0/0:11,0:11:27.06:0,27,608	0/1:50,0:15:4.82:5,0,332	0/0:56,0:23:29.29:0,29,344	0/0:12,0:12:36.12:0,36,956	0/0:14,0:13:36.11:0,36,866	0/0:35,0:35:78.23:0,78,1921	0/1:25,0:24:35.95:243,0,36	1/1:11,5:16:38.82:396,39,0	0/0:36,0:36:93.31:0,93,2312	0/0:16,0:16:48.11:0,48,1112	1/1:15,5:20:32.89:303,33,0	1/1:16,8:24:56.41:610,56,0	0/0:18,0:18:51.16:0,51,1233	0/0:25,0:25:69.22:0,69,1693	0/0:27,0:27:69.20:0,69,1564	0/0:34,0:34:94.28:0,94,2395	0/1:17,0:17:19.19:19,0,250	0/0:21,0:16:29.24:0,29,776	0/0:19,0:19:54.17:0,54,1290	0/0:57,0:57:99:0,162,3659	1/1:18,3:21:32.96:249,33,0	1/1:9,1:10:4.42:40,4,0	1/1:22,8:30:38.54:356,39,0	0/0:16,0:16:48.12:0,48,1046	0/0:31,0:31:84.19:0,84,1944	0/0:17,0:17:45.15:0,45,1119	0/0:17,0:17:51.09:0,51,1060
chr10	74210646	.	T	TG	9355.50	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-6.271;DP=664;FS=1.323;HRun=1;HaplotypeScore=68.7045;InbreedingCoeff=0.9987;MQ=88.96;MQ0=0;MQRankSum=-6.578;QD=39.31;ReadPosRankSum=0.922;VQSLOD=5.4666;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,46:47:99:1966,132,0	0/0:7,0:7:21.03:0,21,243	0/0:26,0:26:74.98:0,75,911	0/0:27,0:27:71.32:0,71,894	0/0:25,0:25:75.22:0,75,957	0/0:33,0:33:93.26:0,93,1165	0/0:23,0:23:69.21:0,69,881	1/1:1,26:27:75.22:1078,75,0	1/1:0,24:24:66.22:986,66,0	0/0:16,0:16:48.13:0,48,589	0/0:15,0:15:44.92:0,45,543	1/1:0,16:16:42.14:629,42,0	1/1:0,22:22:57.19:854,57,0	0/0:19,0:19:57.17:0,57,725	0/0:28,0:28:84.23:0,84,1047	0/0:25,0:25:75.24:0,75,973	0/0:27,0:27:81.26:0,81,1051	1/1:0,28:28:72.24:1078,72,0	0/0:26,0:26:62.25:0,62,935	0/0:23,0:23:69.08:0,69,857	0/0:28,0:28:84.23:0,84,1047	1/1:1,31:32:87.10:1241,87,0	1/1:1,20:21:48.63:718,49,0	1/1:1,20:21:54.18:806,54,0	0/0:17,0:17:51.17:0,51,662	0/0:22,0:22:66.21:0,66,845	0/0:32,0:32:96.30:0,96,1231	0/0:7,0:7:21.07:0,21,272
chr10	74212462	.	G	GA	1430.35	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.032;DP=615;FS=3.987;HRun=3;HaplotypeScore=63.7055;InbreedingCoeff=0.9857;MQ=91.66;MQ0=0;MQRankSum=-3.351;QD=37.64;ReadPosRankSum=-0.850;VQSLOD=3.7667;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,1578	0/0:7,0:7:21.05:0,21,241	0/0:22,0:22:57.13:0,57,644	0/0:27,0:27:72.11:0,72,791	0/0:24,0:24:69.21:0,69,828	0/0:17,0:17:48.13:0,48,563	0/0:28,0:28:63.16:0,63,730	1/1:1,16:17:48.16:670,48,0	0/0:5,0:5:15.05:0,15,180	0/0:23,0:23:54.16:0,54,648	0/0:17,0:17:45.14:0,45,539	0/0:25,0:25:69.20:0,69,816	0/0:20,0:20:57.17:0,57,680	0/0:22,0:22:54.16:0,54,647	0/0:27,0:27:81.23:0,81,959	0/0:27,0:27:81.25:0,81,971	0/0:45,0:45:99:0,126,1497	1/1:0,21:21:63.21:882,63,0	0/0:18,0:18:54.17:0,54,648	0/0:19,0:19:57.13:0,57,647	0/0:32,0:32:96.29:0,96,1151	0/0:14,0:14:39.12:0,39,468	0/0:17,0:17:42.13:0,42,502	0/0:19,0:19:51.16:0,51,612	0/0:18,0:18:54.15:0,54,636	0/0:31,0:31:90.27:0,90,1070	0/0:20,0:20:57.16:0,57,671	0/0:6,0:6:18.06:0,18,216
chr10	74213203	.	C	CTTT	2033.89	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-1.518;DP=554;FS=0.534;HRun=13;HaplotypeScore=94.1192;InbreedingCoeff=0.9397;MQ=66.48;MQ0=0;MQRankSum=-2.188;QD=14.32;ReadPosRankSum=-5.449;VQSLOD=0.7132;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:51:99:0,105,1084	0/0:7,0:8:16.38:0,16,166	0/0:10,0:6:8.78:0,9,74	0/0:14,0:9:5.49:0,5,34	0/0:18,0:20:42.40:0,42,429	0/0:24,0:26:46.83:0,47,501	0/0:24,0:28:56.62:0,57,551	1/1:9,10:24:39.09:552,39,0	1/1:5,14:20:30:406,30,0	0/0:22,0:23:41.69:0,42,430	0/0:13,0:13:8.68:0,9,97	1/1:7,14:25:12.49:170,12,0	1/1:4,14:19:14.66:220,15,0	0/0:17,0:21:28.24:0,28,291	0/0:18,0:19:38.72:0,39,388	0/0:24,1:25:37.23:0,37,582	0/0:23,0:27:31.13:0,31,364	1/1:6,7:16:18.14:224,18,0	0/0:14,0:16:19.16:0,19,222	0/0:12,0:15:17.65:0,18,191	0/0:9,0:10:17.87:0,18,163	1/1:5,5:13:17.95:219,18,0	1/1:4,0:9:13.57:160,14,0	1/1:2,11:16:21.02:286,21,0	0/0:18,0:18:29.69:0,30,308	0/0:20,0:20:26.74:0,27,271	0/0:21,0:27:53.55:0,54,499	0/0:18,0:19:38.71:0,39,405
chr10	74214547	.	ATATATATGTATG	A	674.19	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=2.743;DP=304;FS=2.407;HRun=0;HaplotypeScore=103.0782;InbreedingCoeff=0.5966;MQ=69.09;MQ0=3;MQRankSum=-3.247;QD=19.26;ReadPosRankSum=-1.232;VQSLOD=2.1101;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:4.55:0,5,103	0/0:9,0:9:24.08:0,24,1079	1/1:4,0:3:0.47:1,0,0	0/0:10,0:5:2.66:0,3,16	0/0:21,0:21:60.19:0,60,2633	0/0:17,0:17:48.11:0,48,2167	0/0:6,0:6:18.03:0,18,581	0/1:11,0:11:30.75:136,0,31	1/1:3,0:3:3.01:86,3,0	0/0:14,0:14:36.10:0,36,1645	0/0:16,0:16:39.12:0,39,1455	1/1:6,2:8:6.02:218,6,0	1/1:1,5:6:9.03:244,9,0	0/0:9,0:9:24.07:0,24,1134	0/0:9,0:9:21.06:0,21,870	0/0:4,0:4:9.03:0,9,400	0/0:17,0:17:48.14:0,48,1930	1/1:2,0:2:2.98:21,3,0	0/0:21,0:21:53.94:0,54,1654	0/0:13,0:13:39.13:0,39,1773	0/0:8,0:8:18.06:0,18,723	0/0:1,0:1:3.01:0,3,33	1/1:0,1:1:3.01:109,3,0	./.	0/0:25,0:25:63.19:0,63,2891	0/0:22,0:22:57.19:0,57,2724	0/0:16,0:14:39.09:0,39,1670	0/0:17,0:17:51.18:0,51,2479
chr10	74214551	.	ATATGTATG	A	569.79	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=2.191;DP=298;FS=0.971;HRun=0;HaplotypeScore=78.0242;InbreedingCoeff=0.6769;MQ=66.10;MQ0=3;MQRankSum=-2.590;QD=10.75;ReadPosRankSum=-1.995;VQSLOD=0.9787;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:5.43:5,0,103	0/0:9,0:9:24.08:0,24,837	0/1:3,0:2:0:0,0,0	0/1:10,0:4:0.85:1,0,2	0/0:22,0:22:66.20:0,66,1999	0/0:17,0:17:51.17:0,51,1736	0/0:8,0:8:24.05:0,24,539	1/1:10,0:10:21.90:240,22,0	1/1:1,2:3:3.01:63,3,0	0/0:13,0:13:39.11:0,39,1310	0/0:15,0:15:42.13:0,42,1196	1/1:3,4:7:6.02:134,6,0	1/1:6,0:6:9.03:172,9,0	0/0:9,0:9:24.07:0,24,835	0/0:8,0:8:21.06:0,21,666	0/0:3,0:3:8.77:0,9,278	0/0:18,0:18:51.15:0,51,1520	1/1:2,0:2:3.01:40,3,0	0/0:21,0:21:53.94:0,54,1278	0/0:15,0:15:45.15:0,45,1438	0/0:7,0:7:18.06:0,18,532	0/0:1,0:1:2.99:0,3,24	1/1:1,0:1:3.01:68,3,0	./.	0/0:23,0:23:63.19:0,63,2224	0/0:22,0:22:60.20:0,60,2098	0/0:15,0:13:39.09:0,39,1264	0/0:17,0:17:51.17:0,51,1822
chr10	74214559	.	G	GTA	58.65	PASS	AB=1.000;AC=5;AF=0.096;AN=52;BaseQRankSum=3.478;DP=294;FS=0.000;HRun=0;HaplotypeScore=45.9015;InbreedingCoeff=0.5642;MQ=63.87;MQ0=4;MQRankSum=-1.475;QD=2.79;ReadPosRankSum=-1.261;VQSLOD=1.1201;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,5:11:8.58:122,9,0	0/0:8,0:8:15.05:0,15,187	0/0:2,0:1:0.47:0,0,1	0/0:13,0:4:0.26:0,0,1	0/0:23,0:23:57.18:0,57,712	0/0:21,0:21:45.07:0,45,561	0/0:7,0:7:18.04:0,18,211	0/1:6,0:6:0.04:0,0,0	1/1:4,0:4:3.01:33,3,0	0/0:11,0:11:33.11:0,33,412	0/0:16,0:16:39.11:0,39,474	0/0:6,0:6:5.60:0,6,27	0/0:7,0:8:8.69:0,9,51	0/0:11,0:10:24.08:0,24,300	0/0:7,0:7:15.05:0,15,187	0/0:3,0:3:6.02:0,6,75	0/0:20,0:21:39.10:0,39,471	./.	0/0:15,0:15:27.07:0,27,324	0/0:15,0:15:36.11:0,36,450	0/0:6,0:6:9.03:0,9,112	0/0:1,0:2:1.18:0,1,14	0/0:2,0:2:2.36:0,2,13	./.	0/0:21,0:21:48.05:0,48,585	0/0:21,0:21:51.16:0,51,637	0/0:10,1:9:24.08:0,24,300	0/0:18,0:18:45.12:0,45,547
chr10	74214594	.	TATGTATGA	T	836.74	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=0.059;DP=363;FS=10.288;HRun=0;HaplotypeScore=96.4577;InbreedingCoeff=0.9039;MQ=65.57;MQ0=3;MQRankSum=-0.506;QD=19.02;ReadPosRankSum=-2.741;VQSLOD=0.9976;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:27.07:0,27,355	0/0:9,0:9:21.03:0,21,575	0/0:16,0:14:39.56:0,40,540	0/0:21,0:10:29.91:0,30,450	0/0:22,0:22:60.16:0,60,2218	0/0:17,0:17:48.15:0,48,1681	0/0:10,0:10:30.07:0,30,826	0/0:12,0:12:15.53:0,16,259	1/1:4,1:5:12:155,12,0	0/0:16,0:16:48.14:0,48,1315	0/0:16,0:16:42.09:0,42,1255	1/1:6,2:8:21:290,21,0	1/1:8,1:9:15.94:184,16,0	0/0:14,0:14:39.11:0,39,1224	0/0:8,0:8:24.04:0,24,595	0/0:7,0:7:21.05:0,21,483	0/0:18,0:18:54.03:0,54,1415	0/0:8,0:8:20.12:0,20,131	0/0:13,0:13:4.67:0,5,426	0/0:15,0:13:39.08:0,39,1075	0/0:5,0:5:15.04:0,15,446	1/1:8,0:8:19.25:226,19,0	1/1:0,9:9:3.01:83,3,0	1/1:5,0:5:8.98:72,9,0	0/0:19,0:19:51.14:0,51,1794	0/0:21,0:21:60.19:0,60,2046	0/0:15,0:14:45.03:0,45,1064	0/0:21,0:21:63.10:0,63,1842
chr10	74215258	.	A	AT	3971.85	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=5.712;DP=534;FS=3.441;HRun=8;HaplotypeScore=54.8946;InbreedingCoeff=0.9950;MQ=73.31;MQ0=0;MQRankSum=-1.206;QD=29.64;ReadPosRankSum=2.227;VQSLOD=3.8029;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:54.15:614,54,0	0/0:6,0:6:17.99:0,18,160	0/0:13,0:13:29.59:0,30,239	0/0:7,0:7:14.96:0,15,134	0/0:24,0:25:68.05:0,68,605	0/0:18,0:18:54.03:0,54,494	0/0:11,0:11:30:0,30,269	0/0:22,0:22:48:0,48,433	1/1:1,21:22:60.18:692,60,0	0/0:28,0:28:75.04:0,75,687	0/0:22,0:22:57.02:0,57,521	1/1:1,17:18:45.13:519,45,0	1/1:1,18:19:48.14:554,48,0	0/0:18,0:18:51.02:0,51,466	0/0:23,0:23:63.03:0,63,577	0/0:16,0:16:45.02:0,45,412	0/0:19,0:19:57.02:0,57,517	0/0:18,0:18:51.03:0,51,466	0/0:28,0:28:69.01:0,69,623	0/0:28,0:28:75.02:0,75,683	0/0:15,0:15:44.95:0,45,401	1/1:1,21:22:60.14:678,60,0	1/1:1,18:20:57:638,57,0	1/1:1,9:10:24.07:277,24,0	0/0:19,0:19:51.02:0,51,467	0/0:25,0:25:72.02:0,72,655	0/0:26,0:26:71.99:0,72,649	0/0:13,0:13:39.02:0,39,357
chr10	74216945	.	A	AT	994.22	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.487;DP=714;FS=6.821;HRun=8;HaplotypeScore=72.4112;InbreedingCoeff=0.9836;MQ=76.60;MQ0=0;MQRankSum=-3.756;QD=25.49;ReadPosRankSum=3.787;VQSLOD=4.4537;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,34:39:96.18:1089,96,0	0/0:13,0:13:36.02:0,36,329	0/0:24,0:23:44.65:0,45,375	0/0:19,0:18:30.37:0,30,253	0/0:35,0:35:99:0,99,906	0/0:17,0:17:39.02:0,39,357	0/0:21,0:21:60.03:0,60,549	0/0:39,0:38:86.99:0,87,792	0/0:22,0:22:60.03:0,60,549	0/0:26,0:26:72.04:0,72,659	0/0:14,0:14:39.02:0,39,357	0/0:27,0:27:69:0,69,622	0/0:24,0:25:71.06:0,71,633	0/0:25,0:25:60.01:0,60,549	0/0:28,0:28:84.05:0,84,769	0/0:31,0:31:81.02:0,81,737	0/0:35,0:35:99:0,99,901	0/0:31,0:31:81:0,81,733	0/0:33,1:34:46.39:0,46,673	0/0:17,0:17:48.03:0,48,439	0/0:27,0:27:69.02:0,69,627	0/0:29,0:29:78.04:0,78,714	0/0:19,0:19:54.02:0,54,494	0/0:27,0:27:72.04:0,72,659	0/0:32,0:32:87.02:0,87,790	0/0:24,0:24:63.03:0,63,577	0/0:27,0:27:78.04:0,78,714	0/0:7,0:7:14.99:0,15,137
chr10	74220522	.	GT	G	1490.01	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.648;DP=571;FS=5.135;HRun=6;HaplotypeScore=62.0728;InbreedingCoeff=0.9859;MQ=88.51;MQ0=0;MQRankSum=-3.909;QD=26.61;ReadPosRankSum=-0.747;VQSLOD=3.5907;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.20:0,63,829	0/0:10,0:10:30.10:0,30,395	0/0:25,0:25:60.10:0,60,687	0/0:21,0:21:51.08:0,51,660	0/0:17,0:17:48.16:0,48,631	0/0:27,0:27:78.25:0,78,1026	0/0:13,0:13:39.13:0,39,513	1/1:2,25:27:75.19:806,75,0	0/0:21,0:21:48.15:0,48,618	0/0:21,0:21:60.18:0,60,765	0/0:20,0:20:60.20:0,60,788	0/0:24,0:24:69.21:0,69,894	0/0:16,0:16:48.16:0,48,631	0/0:11,0:11:30.10:0,30,395	0/0:27,0:27:78.24:0,78,1000	0/0:24,0:24:72.23:0,72,934	0/0:19,0:19:48.09:0,48,585	1/1:1,28:29:75.19:806,75,0	0/0:13,0:13:39.13:0,39,513	0/0:17,0:17:48.15:0,48,619	0/0:15,1:16:12.90:0,13,520	0/0:14,0:14:39.13:0,39,512	0/0:24,0:24:69.21:0,69,893	0/0:36,0:36:99:0,105,1382	0/0:16,0:16:45.13:0,45,575	0/0:26,0:26:72.23:0,72,947	0/0:26,0:26:75.23:0,75,971	0/0:9,0:9:27.09:0,27,355
chr10	74221258	.	AT	A	979.07	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.701;DP=375;FS=8.033;HRun=8;HaplotypeScore=35.0534;InbreedingCoeff=0.9362;MQ=71.99;MQ0=0;MQRankSum=0.757;QD=22.77;ReadPosRankSum=-4.093;VQSLOD=1.6480;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.15:0,48,579	0/0:6,0:6:18.06:0,18,217	0/0:9,0:7:12:0,12,118	0/0:10,0:9:12.40:0,12,115	0/0:26,0:26:72.21:0,72,858	0/0:11,0:11:33.10:0,33,399	0/0:8,0:8:24.07:0,24,290	1/1:3,27:30:81.12:782,81,0	0/0:17,0:17:48.15:0,48,579	0/0:20,0:20:54.17:0,54,652	0/0:12,0:12:36.11:0,36,435	0/0:12,0:12:36.11:0,36,435	0/0:11,0:11:33.09:0,33,387	0/0:8,0:8:21.06:0,21,254	0/0:14,0:13:36.11:0,36,435	0/0:10,0:10:27.08:0,27,326	0/0:16,0:16:45.14:0,45,543	1/1:2,11:13:33.05:319,33,0	0/0:14,0:14:33.10:0,33,398	0/0:27,0:27:75.23:0,75,906	0/0:5,0:5:15.05:0,15,180	0/0:4,0:4:12.04:0,12,145	0/0:15,0:15:42.13:0,42,505	0/0:8,0:8:21.06:0,21,254	0/0:16,0:16:42.13:0,42,507	0/0:16,0:16:48.14:0,48,570	0/0:14,0:14:42.09:0,42,480	0/0:7,0:7:21.06:0,21,254
chr10	74221457	.	GT	G	1088.11	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=7.952;DP=536;FS=21.183;HRun=8;HaplotypeScore=49.1663;InbreedingCoeff=0.8385;MQ=72.56;MQ0=0;MQRankSum=-0.342;QD=16.74;ReadPosRankSum=-2.853;VQSLOD=1.5533;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:29:55.24:0,55,933	0/0:4,0:4:12.04:0,12,145	0/1:11,0:11:2.04:2,0,218	0/0:9,0:9:21.03:0,21,231	0/0:32,0:31:90.28:0,90,1087	0/0:21,0:21:60.18:0,60,725	0/0:16,0:16:42.13:0,42,507	1/1:6,32:39:89.30:832,89,0	0/0:12,0:12:33.07:0,33,383	0/0:28,0:28:72.22:0,72,868	0/0:24,0:24:66.18:0,66,775	0/0:13,0:13:39.11:0,39,460	0/0:17,0:17:48.12:0,48,565	0/0:21,0:21:54.17:0,54,652	0/0:29,0:29:78.23:0,78,931	0/0:17,0:17:51.14:0,51,604	0/0:29,0:28:75.19:0,75,889	1/1:2,13:15:39.06:377,39,0	0/0:14,0:14:36.11:0,36,435	0/0:19,1:20:28.20:0,28,622	0/0:11,0:11:33.10:0,33,394	0/0:8,0:8:24.07:0,24,290	0/0:25,0:25:72.22:0,72,870	0/0:8,0:8:24.06:0,24,279	0/0:26,0:26:75.23:0,75,906	0/0:25,0:25:72.20:0,72,850	0/0:23,0:23:69.18:0,69,802	0/0:10,0:10:27.08:0,27,326
chr10	74223755	.	AG	A	5101.64	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.397;DP=610;FS=6.647;HRun=2;HaplotypeScore=74.6292;InbreedingCoeff=0.9965;MQ=67.96;MQ0=0;MQRankSum=0.480;QD=35.18;ReadPosRankSum=1.358;VQSLOD=5.2637;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1598	0/0:11,0:11:33.08:0,33,472	0/0:24,0:24:69.18:0,69,966	0/0:22,0:21:63.21:0,63,938	0/0:23,0:23:66.22:0,66,987	0/0:28,0:28:63.21:0,63,944	0/0:16,0:16:48.11:0,48,673	0/0:32,0:32:90.30:0,90,1329	1/1:1,16:17:48.16:623,48,0	0/0:19,0:19:48.12:0,48,694	0/0:18,0:18:48.16:0,48,718	1/1:1,21:22:60.19:778,60,0	1/1:0,26:26:72.23:934,72,0	0/0:20,0:20:57.18:0,57,833	0/0:31,0:31:93.27:0,93,1368	0/0:24,0:24:72.24:0,72,1079	0/0:33,0:33:96.31:0,96,1420	0/0:18,0:18:54.17:0,54,787	0/0:21,0:21:63.16:0,63,863	0/0:13,0:13:39.13:0,39,583	0/0:18,0:18:54.18:0,54,809	1/1:0,30:30:81.26:1052,81,0	1/1:0,22:22:57.19:740,57,0	1/1:0,28:28:75.24:974,75,0	0/0:10,0:10:15.01:0,15,200	0/0:22,0:22:66.21:0,66,956	0/0:16,0:16:48.16:0,48,718	0/0:10,0:10:27.06:0,27,380
chr10	74223797	.	CAGATAGATAGAT	C	3528.41	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=5.263;DP=718;FS=0.000;HRun=0;HaplotypeScore=271.2668;InbreedingCoeff=0.7359;MQ=63.45;MQ0=2;MQRankSum=-5.695;QD=31.50;ReadPosRankSum=-2.008;VQSLOD=2.1479;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:42.10:0,42,1208	0/0:14,0:14:36.12:0,36,1831	0/0:36,0:29:5.97:0,6,48	0/1:12,0:10:0.83:1,0,25	0/0:12,0:35:48.11:0,48,2117	0/0:18,0:34:33.08:0,33,1190	0/0:13,0:13:39.06:0,39,1285	0/0:33,0:33:27.33:0,27,292	0/0:24,0:24:57.16:0,57,2033	1/1:7,14:21:39.10:966,39,0	1/1:11,19:30:42.14:1389,42,0	0/0:28,0:28:81.28:0,81,3480	0/0:32,0:32:78.25:0,78,3218	0/0:19,0:19:33.11:0,33,1799	0/0:28,0:28:60.19:0,60,2752	0/0:25,0:25:48.16:0,48,2252	0/0:31,0:31:57.14:0,57,2704	0/0:20,0:20:40.36:0,40,1436	0/0:18,0:17:18.06:0,18,778	0/0:34,0:33:78.27:0,78,4219	0/0:22,0:21:45.14:0,45,2144	0/0:27,0:27:54.10:0,54,2046	0/0:30,0:30:66.17:0,66,2325	0/0:24,0:24:39.10:0,39,1226	1/1:3,17:20:33.11:1140,33,0	0/1:29,0:29:31.54:32,0,3336	0/0:33,0:33:90.27:0,90,4572	0/0:18,0:18:51.18:0,51,2796
chr10	74224062	.	CACACACATACACACATACAT	C	4486.83	PASS	AB=0.981;AC=4;AF=0.077;AN=52;BaseQRankSum=2.884;DP=1284;FS=24.726;HRun=0;HaplotypeScore=550.3088;InbreedingCoeff=0.1955;MQ=52.65;MQ0=51;MQRankSum=-6.599;QD=29.33;ReadPosRankSum=-2.025;VQSLOD=0.5093;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:69.01:0,69,3537	0/0:21,0:21:45.14:0,45,1894	./.	0/0:12,0:8:3.01:0,3,74	0/0:38,0:37:87.29:0,87,4579	0/0:37,0:36:93.32:0,93,4631	0/0:44,0:41:84.26:0,84,3204	0/0:94,0:54:32.41:0,32,1835	0/0:53,0:52:99:0,117,6510	0/1:73,3:68:99:4352,0,152	./.	0/0:49,0:48:99:0,117,6626	0/0:69,0:67:99:0,169,8988	0/0:59,0:58:99:0,156,8135	0/0:72,0:72:99:0,181,9269	0/0:62,0:61:99:0,132,7317	0/0:42,0:40:78.11:0,78,4058	0/1:33,0:33:99:132,0,3768	0/0:40,0:25:54.65:0,55,2894	0/0:43,0:41:99:0,105,5194	0/0:67,0:57:99:0,150,8314	0/0:45,0:43:99:0,114,5598	0/0:29,0:27:63.22:0,63,3545	0/0:47,0:47:90.24:0,90,4369	1/1:14,30:43:1.25:3,1,0	0/0:62,0:52:99:0,120,5304	0/0:28,0:26:63.20:0,63,3194	0/0:21,0:20:39.13:0,39,2166
chr10	74224080	.	CAT	C	1745.77	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=11.159;DP=1318;FS=13.331;HRun=0;HaplotypeScore=172.4272;InbreedingCoeff=0.6551;MQ=52.76;MQ0=49;MQRankSum=-6.450;QD=11.34;ReadPosRankSum=-3.953;VQSLOD=1.9515;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:49:77.17:0,77,1701	0/0:21,0:21:57.16:0,57,993	0/1:14,0:3:17.82:18,0,60	0/0:22,0:5:15.03:0,15,250	0/0:41,0:40:99:0,105,1970	0/0:37,0:36:99:0,105,2006	0/0:41,0:39:93.08:0,93,1594	0/0:88,1:54:85.50:0,85,2302	0/0:55,0:54:99:0,141,2533	1/1:57,20:69:16.31:1828,16,0	0/1:29,0:28:0:0,0,0	0/0:56,0:54:99:0,125,2713	0/0:69,0:68:99:0,196,3682	0/0:66,0:65:99:0,187,3486	0/0:69,0:69:99:0,205,3800	0/0:57,0:56:99:0,169,3142	0/0:41,0:39:89.86:0,90,1621	0/0:39,0:39:37.84:0,38,1343	0/0:37,0:26:75.22:0,75,1283	0/0:49,0:48:99:0,138,2453	0/0:84,0:74:99:0,199,3639	0/0:42,0:41:99:0,123,2221	0/0:28,0:26:72.25:0,72,1376	0/0:51,0:51:99:0,120,2214	1/1:34,0:33:2.37:8,2,0	0/0:65,0:55:99:0,127,2734	0/0:26,2:26:78.25:0,78,1470	0/0:27,0:26:69.24:0,69,1327
chr10	74224138	.	C	CAT	3812.59	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.200;DP=1401;FS=0.918;HRun=0;HaplotypeScore=174.1527;InbreedingCoeff=0.9822;MQ=53.20;MQ0=26;MQRankSum=-9.225;QD=30.26;ReadPosRankSum=-3.898;VQSLOD=3.9340;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:89.96:0,90,1433	0/0:21,0:21:56.86:0,57,847	0/0:32,0:4:12.03:0,12,164	0/0:29,0:10:26.88:0,27,375	0/0:57,0:56:99:0,165,2427	0/0:41,0:41:99:0,112,1651	0/0:42,0:38:96.07:0,96,1328	1/1:50,37:60:99:2597,155,0	0/0:58,0:57:99:0,144,2084	0/0:79,0:76:99:0,213,3170	0/0:40,0:40:45.14:0,45,663	0/0:58,0:57:99:0,145,2158	0/0:68,0:66:99:0,192,2801	0/0:55,0:54:99:0,150,2205	0/0:63,0:62:99:0,184,2712	0/0:72,0:71:99:0,214,3103	0/0:31,0:31:58.04:0,58,1031	1/1:18,21:38:23.76:1216,24,0	0/0:36,0:27:81.22:0,81,1150	0/0:49,0:48:99:0,132,1964	0/0:102,0:94:99:0,250,3631	0/0:40,0:40:99:0,111,1610	0/0:33,0:32:96.26:0,96,1380	0/0:54,0:51:99:0,114,1711	0/0:27,0:27:27.09:0,27,413	0/0:71,0:66:99:0,190,2720	0/0:28,0:27:78.26:0,78,1194	0/0:38,0:37:99:0,108,1598
chr10	74224276	.	CACACAT	C	1205.21	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.730;DP=1628;FS=0.000;HRun=0;HaplotypeScore=309.9279;InbreedingCoeff=0.6619;MQ=53.88;MQ0=45;MQRankSum=-6.437;QD=10.04;ReadPosRankSum=-3.642;VQSLOD=1.2370;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:51.10:0,51,1506	0/0:25,0:25:66.20:0,66,1840	0/0:30,0:7:3.01:0,3,38	0/0:45,0:15:20.80:0,21,376	0/0:35,0:32:78.26:0,78,2295	0/0:39,0:39:71.93:0,72,2171	0/0:51,0:44:52.77:0,53,2120	1/1:80,10:52:2.34:637,2,0	0/0:76,0:75:99:0,182,5359	0/0:123,0:116:99:0,293,8410	0/0:33,0:32:69.24:0,69,1934	0/0:69,0:68:99:0,145,4324	0/0:94,0:94:99:0,223,6427	0/0:81,0:81:99:0,184,5438	0/0:83,0:82:99:0,196,5759	0/0:82,0:82:99:0,202,5777	0/0:30,0:30:68.25:0,68,1943	1/1:29,1:29:1.77:661,2,0	0/0:42,0:26:56.39:0,56,1391	0/0:48,0:47:99:0,114,3082	0/0:132,0:125:99:0,277,7885	0/0:56,0:55:99:0,141,3942	0/0:48,0:48:93.32:0,93,2825	0/0:66,0:65:99:0,126,3634	0/0:47,0:47:99:0,105,3013	0/0:84,0:78:99:0,199,5729	0/0:35,0:34:81.28:0,81,2235	0/0:7,0:7:15.05:0,15,441
chr10	74224589	.	A	AC	22250.39	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-11.878;DP=1248;FS=14.154;HRun=0;HaplotypeScore=222.0195;InbreedingCoeff=0.9536;MQ=60.77;MQ0=7;MQRankSum=1.264;QD=40.98;ReadPosRankSum=0.835;VQSLOD=1.1854;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,33:38:77.84:1209,78,0	0/0:18,0:18:54.18:0,54,755	0/0:41,1:21:54.15:0,54,722	0/0:36,0:19:43.38:0,43,523	0/0:40,0:40:99:0,120,1643	0/0:25,2:27:38.77:0,39,925	0/0:17,0:17:45.06:0,45,553	1/1:3,2:1:3.01:38,3,0	1/1:3,63:66:99:3107,196,0	1/1:11,78:88:99:4039,257,0	1/1:0,26:26:69.24:1103,69,0	1/1:1,66:66:99:2684,168,0	1/1:2,70:73:99:3212,166,0	0/0:59,0:59:99:0,172,2390	0/0:78,0:78:99:0,223,3092	0/0:72,1:73:99:0,169,2930	0/0:42,0:42:99:0,123,1673	1/1:3,12:15:40.67:554,41,0	0/0:20,0:19:57.19:0,57,796	0/0:49,0:49:99:0,144,1966	0/0:85,1:85:99:0,244,3332	1/1:1,37:38:99:1631,102,0	1/1:0,42:42:99:1869,117,0	1/1:3,40:42:72.05:1125,72,0	1/1:0,41:41:99:1679,105,0	0/0:47,3:50:3.68:0,4,1781	0/0:51,0:51:99:0,154,2125	0/0:17,0:17:27.82:0,28,570
chr10	74224597	.	T	TAC	515.24	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.185;DP=1245;FS=23.097;HRun=0;HaplotypeScore=325.3280;InbreedingCoeff=0.9021;MQ=60.21;MQ0=6;MQRankSum=-4.487;QD=23.42;ReadPosRankSum=-1.565;VQSLOD=2.8903;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:63.10:0,63,864	0/0:17,0:17:42.14:0,42,576	0/0:42,0:20:48.13:0,48,638	0/0:34,0:19:31.52:0,32,341	0/0:37,0:37:99:0,102,1366	0/0:25,2:27:35.92:0,36,852	0/0:14,0:14:33.11:0,33,453	1/1:5,0:3:3:25,3,0	0/0:70,0:70:99:0,199,2620	0/0:82,0:81:99:0,219,2923	0/0:29,0:29:81.23:0,81,1073	0/0:67,0:66:99:0,166,2226	0/0:76,0:76:99:0,187,2512	0/0:62,0:62:99:0,178,2339	0/0:75,0:75:99:0,204,2728	0/0:80,0:80:99:0,229,3059	0/0:39,0:39:99:0,105,1422	1/1:6,10:16:36.12:599,36,0	0/0:19,0:18:51.12:0,51,678	0/0:48,0:48:99:0,135,1800	0/0:86,0:85:99:0,232,3113	0/0:38,0:38:99:0,99,1283	0/0:43,0:43:99:0,114,1524	0/0:44,2:45:75.21:0,75,989	0/0:40,0:40:99:0,102,1389	0/0:46,0:46:99:0,123,1657	0/0:50,0:50:99:0,147,2009	0/0:19,0:19:54.13:0,54,691
chr10	74224701	.	T	TAC	1388.36	PASS	AB=0.836;AC=4;AF=0.071;AN=56;BaseQRankSum=-3.945;DP=1096;FS=0.000;HRun=0;HaplotypeScore=148.1780;InbreedingCoeff=0.0613;MQ=57.15;MQ0=11;MQRankSum=-3.788;QD=7.55;ReadPosRankSum=-3.909;VQSLOD=2.6998;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:40,2:41:28.10:28,0,761	0/0:14,0:15:29.90:0,30,325	0/0:64,0:22:22.38:0,22,306	0/1:68,1:36:40.20:40,0,473	0/0:26,0:26:72.19:0,72,843	0/0:25,0:25:48.05:0,48,556	0/0:24,0:24:53.66:0,54,650	0/1:27,14:40:44.26:572,0,44	0/0:41,0:41:87.26:0,87,1042	0/0:46,0:46:99:0,108,1264	0/0:26,0:27:53.99:0,54,619	0/0:54,0:57:99:0,141,1655	0/0:38,0:38:90.27:0,90,1079	0/0:47,0:49:99:0,123,1451	0/0:52,0:55:99:0,138,1597	0/0:44,0:46:99:0,111,1277	0/0:42,0:44:92.84:0,93,1075	0/1:15,15:28:3.97:857,0,4	0/0:23,0:25:44.80:0,45,498	0/0:30,0:30:72.21:0,72,856	0/0:58,0:59:99:0,126,1469	0/0:33,0:33:84.22:0,84,974	0/0:25,0:25:60.17:0,60,711	0/0:62,0:62:99:0,138,1646	0/0:34,0:34:84.12:0,84,986	0/0:36,0:37:80.70:0,81,909	0/0:36,0:38:78.01:0,78,889	0/0:9,0:10:23.91:0,24,267
chr10	74225856	.	ATATG	A	2760.02	PASS	AB=0.861;AC=36;AF=0.720;AN=50;BaseQRankSum=5.852;DP=782;FS=9.565;HRun=0;HaplotypeScore=150.9852;InbreedingCoeff=0.5651;MQ=69.45;MQ0=7;MQRankSum=-2.395;QD=5.16;ReadPosRankSum=1.466;VQSLOD=2.2827;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:32:5.96:47,6,0	0/0:16,0:16:15.03:0,15,254	./.	./.	0/0:27,1:28:30.09:0,30,610	0/0:16,0:16:9.01:0,9,162	0/0:27,0:25:12.03:0,12,222	./.	1/1:16,0:32:3:28,3,0	1/1:19,0:34:21.48:192,21,0	1/1:10,0:14:5.93:45,6,0	1/1:12,0:22:18.02:168,18,0	1/1:20,0:42:24.03:224,24,0	0/0:22,0:41:48.14:0,48,815	1/1:26,17:41:15.05:226,15,0	1/1:26,14:40:35.15:503,35,0	1/1:16,10:26:21.07:315,21,0	0/0:15,0:19:3.01:0,3,57	1/1:22,3:24:8.70:100,9,0	1/1:25,8:33:14.94:226,15,0	0/1:32,6:38:69.27:69,0,309	1/1:12,0:20:9.01:84,9,0	1/1:9,0:19:2.92:28,3,0	1/1:17,0:23:2.99:28,3,0	1/1:14,0:22:12.01:112,12,0	0/1:24,4:28:99:151,0,369	1/1:19,12:31:24.08:359,24,0	1/1:5,0:10:3:28,3,0
chr10	74229415	.	AGG	A	2831.84	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.185;DP=513;FS=0.000;HRun=10;HaplotypeScore=84.5358;InbreedingCoeff=0.9808;MQ=80.19;MQ0=2;MQRankSum=-8.856;QD=25.74;ReadPosRankSum=2.253;VQSLOD=3.6539;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:69.18:769,69,0	0/0:7,0:7:21.07:0,21,333	0/0:37,0:18:35.07:0,35,405	0/0:36,0:22:27.63:0,28,300	0/0:25,0:25:47.12:0,47,660	0/0:18,0:19:53.67:0,54,807	0/0:14,1:15:11.70:0,12,609	1/1:7,10:17:16.69:288,17,0	0/0:2,0:15:27.45:0,27,94	1/1:1,15:16:42.11:468,42,0	1/1:2,17:19:54.13:593,54,0	0/0:3,0:15:23.66:0,24,83	0/0:0,0:12:22.36:0,22,77	0/0:19,0:19:45.13:0,45,669	0/0:12,0:12:30.10:0,30,476	0/0:23,0:24:71.68:0,72,1037	0/0:15,0:16:35.58:0,36,487	1/1:3,9:12:27.06:300,27,0	0/0:14,0:15:35.47:0,35,490	0/0:18,0:18:43.98:0,44,593	0/0:15,0:15:42.14:0,42,667	0/0:1,0:14:20.32:0,20,99	0/0:1,0:23:22.67:0,23,123	0/0:3,0:8:12.48:0,12,43	1/1:2,17:19:54.14:602,54,0	0/0:22,1:23:23.72:0,24,755	0/0:17,0:16:45.12:0,45,682	0/0:16,0:16:42.12:0,42,611
chr10	74229430	.	TA	T	890.57	PASS	AB=0.900;AC=10;AF=0.179;AN=56;BaseQRankSum=8.090;DP=544;FS=1.023;HRun=11;HaplotypeScore=85.5032;InbreedingCoeff=0.5627;MQ=75.83;MQ0=3;MQRankSum=-6.335;QD=6.41;ReadPosRankSum=2.302;VQSLOD=2.2429;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,1:30:50.54:0,51,735	0/0:9,0:9:21.04:0,21,217	0/0:42,0:19:20.35:0,20,178	0/1:34,1:20:1.02:1,0,68	0/0:23,1:24:25.87:0,26,435	0/0:21,0:21:26.51:0,27,479	0/0:14,1:15:14.45:0,14,359	0/0:28,0:28:72.17:0,72,756	0/0:14,0:14:33.08:0,33,351	1/1:4,14:18:38.94:320,39,0	1/1:2,14:17:43.99:350,44,0	0/0:14,1:15:14.41:0,14,332	0/0:13,1:14:5.35:0,5,246	0/0:14,0:15:38.93:0,39,398	0/0:10,0:11:26.90:0,27,270	0/0:27,3:30:7.26:0,7,679	0/0:13,1:15:17.29:0,17,361	0/0:12,0:13:26.16:0,26,287	0/1:17,1:18:2.29:2,0,272	0/0:19,1:20:16.60:0,17,424	0/1:15,2:17:1.19:1,0,389	0/0:14,0:15:16.07:0,16,235	0/0:23,2:25:18.60:0,19,349	0/0:9,0:9:21.04:0,21,217	1/1:3,13:17:40.99:325,41,0	0/0:24,1:26:9.25:0,9,464	0/0:13,0:14:35.92:0,36,366	0/1:12,3:15:37.84:38,0,252
chr10	74229492	.	CTGTTGT	C	3739	PASS	AB=0.964;AC=11;AF=0.196;AN=56;BaseQRankSum=10.683;DP=584;FS=1.049;HRun=0;HaplotypeScore=129.4786;InbreedingCoeff=0.9361;MQ=75.53;MQ0=1;MQRankSum=-9.204;QD=28.76;ReadPosRankSum=-1.437;VQSLOD=2.8991;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:96.33:0,96,3030	0/0:12,0:12:30.10:0,30,997	0/0:28,0:26:39.02:0,39,787	0/0:29,0:24:29.94:0,30,742	0/0:24,0:24:54.19:0,54,1767	0/0:23,0:23:66.20:0,66,2018	0/0:17,0:17:42.13:0,42,1215	1/1:14,12:26:36.11:657,36,0	0/0:16,0:16:39.13:0,39,1299	1/1:5,14:19:39.13:767,39,0	1/1:7,16:23:42.14:869,42,0	0/0:20,0:20:54.19:0,54,1698	0/0:19,0:19:45.63:0,46,1501	0/0:15,0:15:45.15:0,45,1448	0/0:16,0:16:39.13:0,39,1245	0/0:24,0:24:63.16:0,63,1945	0/0:23,0:23:63.21:0,63,1964	1/1:6,7:12:27.09:551,27,0	0/0:18,0:18:45.15:0,45,1442	0/0:21,0:21:48.16:0,48,1472	0/0:20,0:20:54.17:0,54,1670	0/0:15,0:15:39.13:0,39,1252	0/0:16,0:17:33.11:0,33,1030	0/0:19,0:19:51.18:0,51,1628	1/1:6,16:22:42.14:894,42,0	0/1:26,1:27:0.69:1,0,1882	0/0:24,0:23:69.07:0,69,2062	0/0:14,0:14:27.09:0,27,782
chr10	74231099	.	AACACAGTCAC	A	6258	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.029;DP=879;FS=0.000;HRun=0;HaplotypeScore=273.5188;InbreedingCoeff=0.9924;MQ=89.08;MQ0=2;MQRankSum=-8.510;QD=56.38;ReadPosRankSum=-1.431;VQSLOD=3.4489;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,163,8166	0/0:13,0:13:33.11:0,33,1439	0/0:58,0:51:99:0,121,4117	0/0:71,0:62:99:0,111,4505	0/0:18,0:18:54.19:0,54,2713	0/0:19,0:18:54.19:0,54,2727	0/0:27,0:27:72.23:0,72,3364	1/1:8,31:39:93.30:2625,93,0	0/0:30,0:30:81.28:0,81,4173	1/1:7,19:26:51.17:1548,51,0	1/1:2,14:16:15.05:476,15,0	0/0:35,0:35:99:0,102,4987	0/0:34,0:34:84.29:0,84,4119	0/0:40,0:40:99:0,105,5278	0/0:35,0:35:99:0,99,4973	0/0:34,0:34:93.29:0,93,4510	0/0:42,0:42:99:0,114,5696	1/1:5,8:13:15.05:475,15,0	0/0:28,0:28:66.23:0,66,3153	0/0:19,0:19:48.16:0,48,2460	0/0:61,0:61:99:0,175,8742	0/0:24,0:24:66.23:0,66,3349	0/0:15,0:15:45.15:0,45,2105	0/0:39,0:39:99:0,111,5331	1/1:1,16:16:36.12:1133,36,0	0/0:25,0:25:66.23:0,66,3376	0/0:29,0:29:78.25:0,78,3678	0/0:10,0:10:30.10:0,30,1523
chr10	74231578	.	GACAGAGACAGAGAGAA	G	1566.91	PASS	AB=0.681;AC=7;AF=0.125;AN=56;BaseQRankSum=4.859;DP=770;FS=0.000;HRun=0;HaplotypeScore=295.2218;InbreedingCoeff=0.6975;MQ=55.96;MQ0=24;MQRankSum=-5.484;QD=13.87;ReadPosRankSum=-1.535;VQSLOD=1.8405;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:90.22:0,90,4547	0/0:10,0:10:24.08:0,24,948	0/0:26,0:6:3.01:0,3,43	0/0:34,0:13:3.01:0,3,36	0/0:30,0:30:60.21:0,60,3145	0/0:25,0:25:57.19:0,57,2678	0/0:22,0:22:24.08:0,24,843	1/1:32,0:26:24.05:375,24,0	0/0:17,0:17:42.03:0,42,1651	1/1:14,13:27:30.10:1043,30,0	0/0:11,17:26:0.47:0,0,1	0/0:28,0:28:63.19:0,63,2895	0/0:23,0:23:48.15:0,48,1981	0/0:15,0:14:24.08:0,24,1147	0/0:20,0:20:42.13:0,42,2086	0/0:25,0:25:54.18:0,54,2426	0/0:43,0:43:75.18:0,75,3689	0/1:17,15:32:12.07:67,0,12	0/0:30,0:26:36.12:0,36,1287	0/0:19,0:18:33.11:0,33,1596	0/0:38,0:38:69.22:0,69,3052	0/0:15,0:15:24.08:0,24,1270	0/0:17,0:17:36.08:0,36,1662	0/0:49,0:49:90.29:0,90,4661	1/1:5,17:22:6.02:221,6,0	0/0:37,0:36:75.25:0,75,3603	0/0:37,0:37:32.78:0,33,4075	0/0:17,0:17:26.27:0,26,2019
chr10	74232353	.	GCTT	G	2035.97	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.984;DP=732;FS=1.883;HRun=0;HaplotypeScore=107.2148;InbreedingCoeff=0.9979;MQ=83.63;MQ0=0;MQRankSum=-4.627;QD=33.38;ReadPosRankSum=2.346;VQSLOD=4.4176;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,57:61:99:2131,135,0	0/0:9,0:9:27.08:0,27,568	0/0:31,0:31:84.16:0,84,1653	0/0:27,0:27:56.55:0,57,1261	0/0:27,0:27:75.24:0,75,1591	0/0:26,0:26:75.26:0,75,1676	0/0:28,0:28:72.25:0,72,1602	0/0:35,0:35:99:0,102,2200	0/0:22,0:22:59.92:0,60,1259	0/0:17,0:17:51.17:0,51,1083	0/0:14,0:14:39.13:0,39,883	0/0:28,0:28:84.26:0,84,1793	0/0:25,0:25:72.18:0,72,1438	0/0:31,0:31:90.31:0,90,1984	0/0:23,0:23:63.22:0,63,1427	0/0:26,0:26:78.11:0,78,1663	0/0:31,0:31:87.30:0,87,1968	0/0:20,0:20:60.18:0,60,1310	0/0:21,0:21:63.20:0,63,1319	0/0:23,0:23:66.23:0,66,1460	0/0:51,0:51:99:0,150,3044	0/0:21,0:21:63.16:0,63,1247	0/0:24,0:24:69.17:0,69,1427	0/0:33,0:33:93.32:0,93,2068	0/0:21,0:21:63.22:0,63,1388	0/0:21,0:21:63.19:0,63,1304	0/0:25,0:24:75.26:0,75,1673	0/0:11,0:11:27.09:0,27,612
chr10	74233315	.	ATGTGTGTGTGTGTGTGTGTG	A	1969.58	PASS	AB=0.750;AC=10;AF=0.179;AN=56;BaseQRankSum=7.023;DP=597;FS=0.952;HRun=0;HaplotypeScore=276.1080;InbreedingCoeff=0.5483;MQ=62.73;MQ0=25;MQRankSum=-6.493;QD=18.41;ReadPosRankSum=0.943;VQSLOD=1.9698;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:60.21:0,60,4033	0/0:7,0:7:9.03:0,9,552	0/0:28,0:17:3.01:0,3,69	0/0:44,0:20:6.02:0,6,89	0/0:20,0:19:27.06:0,27,1372	0/0:25,0:24:27.06:0,27,1130	0/0:33,0:32:66.20:0,66,3897	0/0:27,0:26:33.10:0,33,1068	1/1:18,6:23:8.51:472,9,0	0/1:14,0:19:99:192,0,227	0/0:6,0:10:0:0,0,0	1/1:8,9:17:12.04:628,12,0	0/1:12,6:19:99:505,0,164	0/0:21,0:18:27.54:0,28,1522	0/0:15,0:15:21.54:0,22,1534	0/0:22,0:22:35.73:0,36,2164	0/0:28,0:28:48.15:0,48,3074	0/0:14,0:11:21.07:0,21,982	0/0:19,0:18:21.04:0,21,1011	0/0:25,0:25:42.13:0,42,2586	0/0:31,0:29:50.20:0,50,2884	1/1:6,8:14:6.02:108,6,0	1/1:6,6:13:5.75:210,6,0	0/0:16,0:13:0.47:0,0,1	0/0:14,0:24:6.02:0,6,96	0/0:23,0:22:33.09:0,33,1825	0/0:10,0:10:12.51:0,13,567	0/0:8,0:7:6:0,6,167
chr10	74233438	.	T	TC	4973.83	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.955;DP=511;FS=0.000;HRun=0;HaplotypeScore=78.6433;InbreedingCoeff=0.9976;MQ=80.75;MQ0=0;MQRankSum=-4.174;QD=46.05;ReadPosRankSum=0.445;VQSLOD=4.4846;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.15:0,87,1118	0/0:13,0:13:39.13:0,39,545	0/0:17,0:17:48.07:0,48,637	0/0:25,0:24:49.12:0,49,732	0/0:29,0:29:87.28:0,87,1200	0/0:25,0:25:72.22:0,72,989	0/0:16,0:16:45.14:0,45,612	1/1:1,21:22:60.19:934,60,0	0/0:17,0:17:51.07:0,51,652	1/1:0,30:30:90.27:1407,90,0	1/1:0,24:24:72.25:1148,72,0	0/0:15,0:15:45.14:0,45,614	0/0:11,0:11:33.11:0,33,461	0/0:12,0:12:36.10:0,36,471	0/0:16,0:16:48.15:0,48,654	0/0:22,0:22:63.21:0,63,881	0/0:17,0:17:48.16:0,48,671	1/1:0,12:12:36.12:574,36,0	0/0:17,0:17:48.15:0,48,655	0/0:19,0:19:57.19:0,57,797	0/0:10,0:10:30.06:0,30,397	0/0:11,0:11:27.09:0,27,377	0/0:16,0:16:45.09:0,45,590	0/0:21,0:21:54.18:0,54,755	1/1:0,20:20:57.19:910,57,0	0/0:24,0:24:72.21:0,72,954	0/0:15,0:15:45.14:0,45,608	0/0:6,0:6:18.05:0,18,237
chr10	74233957	.	AAAGTTGCCCTCTG	A	16412.95	PASS	AB=0.966;AC=23;AF=0.411;AN=56;BaseQRankSum=16.946;DP=626;FS=0.729;HRun=0;HaplotypeScore=246.4086;InbreedingCoeff=0.9188;MQ=77.15;MQ0=1;MQRankSum=-16.384;QD=73.93;ReadPosRankSum=1.834;VQSLOD=4.5790;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,163,10367	0/0:17,0:17:51.18:0,51,3315	0/0:21,0:21:54.19:0,54,2486	0/0:23,0:23:48.55:0,49,3090	0/0:17,0:17:48.16:0,48,2873	0/0:16,0:16:48.12:0,48,2519	0/0:32,0:32:96.33:0,96,5840	1/1:6,12:18:36.09:1310,36,0	1/1:3,22:25:63.21:2557,63,0	1/1:4,13:18:42.13:1609,42,0	1/1:1,7:8:12.04:487,12,0	1/1:2,20:22:54.18:2128,54,0	1/1:2,22:24:63.21:2557,63,0	0/0:33,0:33:99:0,99,5853	0/0:27,0:27:81.27:0,81,5139	0/0:17,0:17:51.18:0,51,3268	0/0:31,0:31:93.31:0,93,5670	1/1:4,9:13:24.08:974,24,0	0/0:13,0:13:39.13:0,39,2132	0/0:20,0:20:57.20:0,57,3708	0/0:51,0:50:99:0,147,9197	1/1:4,16:21:42.05:1500,42,0	1/1:2,10:12:27.09:1096,27,0	1/1:4,13:17:15.05:609,15,0	1/1:1,15:16:39.13:1544,39,0	0/1:27,1:28:40.51:41,0,4695	0/0:23,0:23:66.23:0,66,4267	0/0:8,0:8:24.08:0,24,1594
chr10	74234902	.	GTCTCTCTTTCTTTCTGTCTTTCTT	G	2726.77	PASS	AB=0.921;AC=18;AF=0.321;AN=56;BaseQRankSum=4.723;DP=589;FS=11.905;HRun=0;HaplotypeScore=350.4281;InbreedingCoeff=0.4694;MQ=66.17;MQ0=0;MQRankSum=-1.271;QD=9.99;ReadPosRankSum=-1.788;VQSLOD=0.7650;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,17:27:9.42:847,9,0	0/0:11,0:11:33.08:0,33,1269	0/0:7,0:5:11.97:0,12,206	0/0:22,0:19:38.94:0,39,619	0/0:22,0:22:66.20:0,66,2912	0/0:34,0:34:99:0,99,4618	0/0:11,0:11:28.89:0,29,1249	0/1:37,0:37:99:207,0,713	1/1:2,18:20:4.26:185,4,0	0/1:28,0:28:34.90:35,0,3208	0/1:20,0:20:30.56:31,0,2007	1/1:10,0:10:25.71:387,26,0	0/1:2,17:19:13.92:187,0,14	0/0:16,0:16:45.13:0,45,2618	0/0:21,0:21:63.17:0,63,3039	0/0:15,0:15:45.11:0,45,2364	0/0:19,0:19:54.16:0,54,3895	0/1:21,0:21:36.81:37,0,1221	0/0:24,0:24:60.04:0,60,1514	0/0:20,0:20:54.19:0,54,2371	0/0:20,0:19:51.11:0,51,1527	1/1:8,16:24:38.54:318,39,0	1/1:3,14:17:17.38:302,17,0	1/1:15,1:16:22.41:347,22,0	0/1:34,0:34:33.24:33,0,3062	0/0:32,0:32:89.16:0,89,4033	0/0:24,0:24:66.20:0,66,3535	0/0:18,0:18:54.18:0,54,2793
chr10	74234918	.	GTCTT	G	2208.72	PASS	AB=0.944;AC=22;AF=0.440;AN=50;BaseQRankSum=4.930;DP=567;FS=8.158;HRun=0;HaplotypeScore=129.0557;InbreedingCoeff=0.5798;MQ=60.78;MQ0=6;MQRankSum=1.383;QD=7.54;ReadPosRankSum=0.978;VQSLOD=2.0837;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:1.25:92,0,1	0/0:10,0:10:12.04:0,12,263	./.	0/1:18,0:14:0:1,0,0	0/0:23,0:23:27.07:0,27,549	0/0:29,0:29:14.36:0,14,636	0/0:11,0:11:18.04:0,18,308	0/1:24,0:24:0:0,0,0	1/1:19,0:19:2.96:19,3,0	0/0:27,0:27:51.13:0,51,832	0/1:20,0:20:3.32:3,0,498	./.	0/1:19,0:19:1.55:23,0,2	0/0:15,0:15:27.07:0,27,568	0/0:19,0:19:24.08:0,24,510	0/0:13,0:13:21.07:0,21,474	0/0:29,0:28:10.48:0,10,1018	0/1:12,12:24:41.88:168,0,42	./.	1/1:11,10:21:24.08:334,24,0	1/1:9,9:17:9.03:140,9,0	0/0:23,0:23:0:0,0,0	1/1:16,0:16:3:28,3,0	1/1:9,0:9:2.60:30,3,0	0/0:35,0:35:38.97:0,39,692	1/1:18,15:33:45.07:620,45,0	1/1:12,13:25:26.61:497,27,0	1/1:11,9:18:27.09:419,27,0
chr10	74235064	.	TTCTC	T	4313.08	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=11.822;DP=603;FS=5.888;HRun=0;HaplotypeScore=126.1398;InbreedingCoeff=0.8223;MQ=51.38;MQ0=10;MQRankSum=-11.884;QD=26.79;ReadPosRankSum=3.025;VQSLOD=4.5394;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,4:29:74.68:1020,75,0	0/0:11,0:11:33.11:0,33,744	0/0:37,0:15:23.69:0,24,338	0/0:55,0:14:18.02:0,18,278	0/0:22,0:22:60.14:0,60,1195	0/0:20,0:20:54.18:0,54,1198	0/0:26,0:26:69.15:0,69,1429	0/0:30,0:30:28.06:0,28,420	1/1:6,6:12:24.03:370,24,0	0/0:25,0:25:18.26:0,18,255	0/0:12,0:12:14.82:0,15,155	1/1:14,0:14:42.13:656,42,0	1/1:21,2:23:56.62:829,57,0	0/0:14,0:14:39.11:0,39,818	0/0:16,0:16:39.13:0,39,877	0/0:15,0:15:39.12:0,39,852	0/0:25,0:25:66.15:0,66,1499	0/1:24,0:23:9.12:9,0,139	0/0:15,0:14:39.13:0,39,812	0/0:18,0:18:42.14:0,42,974	0/1:7,0:7:14.47:14,0,174	1/1:8,0:8:21.07:331,21,0	1/1:23,1:24:53.54:809,54,0	1/1:19,1:20:23.82:275,24,0	0/0:34,0:33:10.09:0,10,455	0/0:22,0:22:56:0,56,1146	0/0:25,0:25:66.17:0,66,1354	0/0:19,0:19:51.17:0,51,1039
chr10	74235071	.	TC	T	700.57	PASS	AB=0.840;AC=13;AF=0.232;AN=56;BaseQRankSum=12.835;DP=605;FS=4.406;HRun=1;HaplotypeScore=107.7350;InbreedingCoeff=0.8394;MQ=49.79;MQ0=13;MQRankSum=-10.188;QD=5.31;ReadPosRankSum=5.276;VQSLOD=0.8019;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,12:30:21.65:182,22,0	0/0:11,0:11:33.11:0,33,526	0/0:44,0:14:31.78:0,32,438	0/0:52,1:10:19.31:0,19,270	0/0:24,0:24:69.23:0,69,1071	0/0:19,0:19:57.19:0,57,901	0/0:28,0:28:75.47:0,75,1192	0/0:27,0:27:79.48:0,79,1162	1/1:7,5:12:12.04:91,12,0	0/0:26,0:26:69.70:0,70,1045	0/0:12,0:12:30.10:0,30,466	1/1:8,7:15:27.47:134,27,0	1/1:13,12:25:3.41:153,3,0	0/0:13,0:13:39.13:0,39,623	0/0:14,0:14:42.14:0,42,661	0/0:14,0:14:42.14:0,42,651	0/0:25,0:26:72.35:0,72,1173	0/0:25,0:24:48.15:0,48,697	0/0:15,0:14:42.14:0,42,671	0/0:19,0:19:51.17:0,51,798	0/0:8,1:9:22.58:0,23,297	1/1:2,6:8:1.66:76,2,0	1/1:8,13:21:21.19:196,21,0	0/1:17,4:21:4.65:42,0,5	0/0:33,0:32:75.25:0,75,1139	0/0:20,0:20:57.19:0,57,910	0/0:23,0:23:69.24:0,69,1103	0/0:18,0:18:51.17:0,51,814
chr10	74235073	.	TCTTTCTC	T	4191.73	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=12.400;DP=617;FS=18.367;HRun=0;HaplotypeScore=157.7943;InbreedingCoeff=0.9245;MQ=49.72;MQ0=13;MQRankSum=-9.510;QD=28.52;ReadPosRankSum=3.383;VQSLOD=2.2822;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,12:30:59.49:945,59,0	0/0:11,0:11:33.11:0,33,1245	0/0:45,0:13:28.16:0,28,788	0/0:51,0:9:12.04:0,12,403	0/0:25,0:25:72.25:0,72,2508	0/0:20,0:20:60.21:0,60,2002	0/0:29,0:29:71.92:0,72,2698	0/0:29,0:29:76.96:0,77,919	1/1:8,5:13:26.44:425,26,0	0/0:27,0:27:68.29:0,68,661	0/1:13,0:13:4.10:4,0,287	1/1:7,7:14:35.79:491,36,0	1/1:13,12:25:22.34:767,22,0	0/0:15,0:15:45.15:0,45,1547	0/0:14,0:14:42.14:0,42,1498	0/0:13,0:13:39.13:0,39,1521	0/0:27,0:27:75.73:0,76,2686	0/0:26,0:25:49.91:0,50,507	0/0:15,0:14:42.14:0,42,1330	0/0:19,0:19:54.19:0,54,1936	0/0:8,0:8:19.89:0,20,529	1/1:3,6:9:16.95:365,17,0	1/1:7,13:20:44.83:857,45,0	1/1:19,4:23:27.87:338,28,0	0/0:33,0:32:74.59:0,75,926	0/0:21,0:21:60.16:0,60,1888	0/0:23,0:23:69.24:0,69,2574	0/0:18,0:18:51.18:0,51,1634
chr10	74235076	.	TTCTC	T	7779.62	PASS	AB=0.957;AC=26;AF=0.464;AN=56;BaseQRankSum=14.938;DP=631;FS=0.374;HRun=0;HaplotypeScore=119.1261;InbreedingCoeff=0.8603;MQ=50.79;MQ0=11;MQRankSum=-7.113;QD=26.55;ReadPosRankSum=1.657;VQSLOD=4.4748;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,7:31:63.14:855,63,0	0/0:10,0:11:32.90:0,33,667	0/0:48,0:13:14.49:0,14,418	0/0:52,0:9:8.80:0,9,168	0/0:25,0:26:69.02:0,69,1458	0/0:19,0:20:47.93:0,48,987	0/0:28,0:29:74.24:0,74,1315	1/1:6,25:31:72.08:965,72,0	1/1:15,1:16:36.12:546,36,0	1/1:4,21:25:59.72:960,60,0	1/1:1,11:12:27.01:396,27,0	1/1:12,2:14:24.08:373,24,0	1/1:16,7:23:45.15:647,45,0	0/0:16,0:17:39.15:0,39,868	0/0:13,0:13:33.11:0,33,773	0/0:13,0:13:34.42:0,34,850	0/0:31,0:31:74.73:0,75,1480	1/1:7,19:25:35.85:600,36,0	0/0:13,0:14:26.88:0,27,560	0/0:19,0:19:48.06:0,48,1086	0/1:8,0:8:17.46:17,0,254	1/1:9,0:9:24.08:353,24,0	1/1:16,5:21:51.13:728,51,0	1/1:24,0:24:47.90:569,48,0	1/1:10,22:31:45.15:763,45,0	0/1:19,1:21:5.97:6,0,784	0/0:24,0:24:60.19:0,60,1437	0/0:20,0:20:32.87:0,33,654
chr10	74235801	.	C	CTT	2347.55	PASS	AB=0.718;AC=23;AF=0.411;AN=56;BaseQRankSum=5.474;DP=680;FS=3.419;HRun=13;HaplotypeScore=109.1948;InbreedingCoeff=0.7819;MQ=66.82;MQ0=2;MQRankSum=-2.064;QD=6.84;ReadPosRankSum=-3.600;VQSLOD=0.4413;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:32:4.02:69,4,0	0/0:12,0:12:29.70:0,30,264	0/0:27,0:21:31.69:0,32,227	0/1:14,0:11:2.27:2,0,123	0/0:17,0:22:15.81:0,16,217	0/0:17,0:19:35.47:0,35,302	0/0:20,0:20:49.68:0,50,446	1/1:16,1:39:71.61:640,72,0	1/1:10,1:37:17.49:159,17,0	1/1:10,12:28:43.32:452,43,0	0/1:2,11:16:1.32:279,0,1	1/1:8,0:27:4.49:81,4,0	1/1:5,0:26:19.14:66,19,0	0/0:29,0:31:34.97:0,35,437	0/0:23,0:26:47.20:0,47,393	0/0:21,0:23:35.63:0,36,354	0/0:27,0:27:44.68:0,45,391	1/1:3,9:19:26.32:214,26,0	0/0:20,0:20:30.55:0,31,256	0/0:18,0:21:9.88:0,10,236	0/0:23,0:30:52.70:0,53,417	1/1:12,0:26:18.87:74,19,0	1/1:4,0:20:16.90:80,17,0	0/1:12,0:35:56.31:66,0,56	1/1:7,14:24:33.79:374,34,0	0/0:21,0:24:41.17:0,41,334	0/0:23,0:25:44.31:0,44,369	0/0:10,0:10:26.99:0,27,238
chr10	74235979	.	ACACGCACACG	A	3123.57	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=4.266;DP=576;FS=6.133;HRun=0;HaplotypeScore=188.7172;InbreedingCoeff=0.2988;MQ=54.40;MQ0=10;MQRankSum=-1.900;QD=12.70;ReadPosRankSum=-3.307;VQSLOD=1.7480;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:9.92:0,10,532	0/0:8,0:8:24.08:0,24,1170	0/1:22,0:8:58.34:58,0,126	0/1:22,0:10:61.03:61,0,166	0/0:20,0:20:30.09:0,30,1112	0/0:16,0:16:45.10:0,45,1550	0/0:25,0:24:42.49:0,42,1137	1/1:3,22:24:66.01:849,66,0	0/1:23,0:23:53.92:54,0,405	1/1:18,0:15:39.12:638,39,0	1/1:15,0:15:30.29:338,30,0	0/1:21,0:20:54.89:55,0,226	0/1:16,0:16:37.76:38,0,522	0/0:23,0:23:14.96:0,15,1869	0/0:17,0:17:45.13:0,45,1647	0/0:17,0:17:39.13:0,39,1185	0/0:25,0:25:59.96:0,60,1587	0/1:30,0:30:7.74:802,0,8	0/0:24,0:23:61.70:0,62,1321	0/0:14,0:14:36.10:0,36,1237	0/0:31,0:30:70.07:0,70,1922	0/0:17,0:18:9.65:0,10,206	0/1:14,0:14:85.49:85,0,123	0/1:23,0:23:37.55:38,0,319	1/1:15,1:16:15.05:290,15,0	0/0:20,0:20:58.82:0,59,1924	0/0:17,0:17:37.73:0,38,1714	0/0:23,0:23:68.84:0,69,2091
chr10	74235981	.	ACGCACACG	A	4087.28	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=4.618;DP=579;FS=2.399;HRun=0;HaplotypeScore=168.7031;InbreedingCoeff=0.3364;MQ=53.35;MQ0=11;MQRankSum=-1.371;QD=14.65;ReadPosRankSum=-4.013;VQSLOD=1.8256;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:30:20.92:21,0,354	0/0:8,0:8:24.08:0,24,990	0/1:22,0:8:57.92:58,0,126	0/1:22,0:9:77.64:78,0,143	0/0:20,0:20:30.09:0,30,945	0/0:15,0:15:45.08:0,45,1327	0/0:28,0:27:51.47:0,51,1120	1/1:23,0:22:66.01:834,66,0	0/1:26,0:26:99:230,0,295	1/1:16,2:15:39.12:710,39,0	1/1:13,0:15:30.53:442,31,0	0/1:21,0:20:78.91:79,0,140	0/1:16,0:16:38.12:38,0,381	0/0:22,0:22:24.02:0,24,1629	0/0:18,0:18:45.13:0,45,1427	0/0:15,0:15:39.13:0,39,1002	0/0:26,0:26:58.70:0,59,1343	1/1:30,0:31:38.31:1037,38,0	0/0:23,0:22:56.87:0,57,1126	0/0:15,0:15:36.10:0,36,1062	0/0:31,0:30:73.07:0,73,1594	0/0:18,0:18:10.25:0,10,182	0/1:14,0:14:71.69:77,0,72	0/1:23,0:23:68.60:69,0,174	1/1:1,14:16:15.05:414,15,0	0/0:21,0:21:61.83:0,62,1695	0/0:17,0:17:37.72:0,38,1477	0/0:23,0:23:68.83:0,69,1634
chr10	74235989	.	GCA	G	247.78	PASS	AB=0.915;AC=17;AF=0.315;AN=54;BaseQRankSum=4.225;DP=585;FS=6.638;HRun=0;HaplotypeScore=132.3080;InbreedingCoeff=-0.2818;MQ=51.38;MQ0=15;MQRankSum=1.823;QD=0.75;ReadPosRankSum=1.150;VQSLOD=1.8367;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:33:7.26:7,0,58	0/1:8,0:8:10.26:10,0,284	./.	0/0:23,0:8:2.13:0,2,5	0/0:14,7:21:27.07:0,27,367	0/1:13,2:15:7.39:7,0,328	0/1:25,2:26:8.87:9,0,392	0/0:26,0:25:3.93:0,4,40	0/1:24,0:24:7.47:7,0,45	0/0:17,0:14:5.46:0,5,44	0/1:16,0:16:1.99:2,0,40	0/1:25,0:24:2.49:2,0,84	0/0:16,0:16:9.96:0,10,92	0/0:24,0:24:35.03:0,35,586	0/1:13,3:16:7.40:7,0,345	0/1:11,2:14:46.97:47,0,377	0/1:19,7:25:92.63:93,0,314	0/0:30,0:30:11.01:0,11,51	0/1:20,2:21:41.96:42,0,246	0/1:12,3:15:6.96:7,0,300	0/1:29,2:30:86.72:87,0,466	0/0:21,0:20:20.23:0,20,94	0/0:13,0:13:2.34:0,2,30	0/0:22,0:22:12.01:0,12,68	1/1:16,0:16:8.90:26,9,0	0/1:21,2:23:7.63:8,0,659	0/1:14,3:17:28.41:28,0,464	0/0:21,0:21:4.24:0,4,355
chr10	74236015	.	A	ACACACACG	3116.07	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=5.352;DP=596;FS=5.314;HRun=0;HaplotypeScore=183.0950;InbreedingCoeff=0.6410;MQ=54.11;MQ0=12;MQRankSum=0.985;QD=11.41;ReadPosRankSum=-0.782;VQSLOD=2.4400;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:14.84:15,0,234	0/0:10,0:10:19.24:0,19,468	0/0:22,0:7:21.02:0,21,204	0/0:17,0:9:23.08:0,23,147	0/0:24,0:23:34.29:0,34,546	0/0:17,0:17:47.43:0,47,797	0/0:25,0:24:46.09:0,46,655	1/1:24,0:24:43.01:393,43,0	1/1:19,1:22:38.99:596,39,0	0/1:15,0:13:3.63:160,0,4	0/1:12,0:12:8.59:123,0,9	1/1:23,1:23:26.94:393,27,0	1/1:14,0:15:15.34:256,15,0	0/0:25,0:25:57.94:0,58,952	0/0:18,0:18:45.07:0,45,887	0/0:14,0:14:39.12:0,39,850	0/0:27,0:26:53.87:0,54,773	1/1:23,0:23:45.60:440,46,0	0/0:27,0:26:65.32:0,65,852	0/0:17,0:17:34.30:0,34,635	0/0:32,0:31:58.49:0,58,1014	1/1:3,11:18:2.24:128,2,0	1/1:18,0:18:26.93:292,27,0	1/1:23,0:24:28.84:418,29,0	0/1:24,0:24:98.91:99,0,112	0/0:27,0:27:70.65:0,71,1166	0/0:21,0:21:31.82:0,32,938	0/1:14,0:14:3.83:4,0,627
chr10	74236097	.	AAT	A	13021.42	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=15.091;DP=620;FS=11.033;HRun=0;HaplotypeScore=78.8851;InbreedingCoeff=0.9999;MQ=89.27;MQ0=0;MQRankSum=-3.310;QD=44.75;ReadPosRankSum=2.942;VQSLOD=5.6850;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,48:48:99:1907,117,0	0/0:14,0:14:42.14:0,42,848	0/0:31,0:31:93.31:0,93,1819	0/0:23,0:23:60.18:0,60,1168	0/0:21,0:21:63.22:0,63,1279	0/0:14,0:14:42.14:0,42,852	0/0:20,0:20:60.18:0,60,1154	1/1:0,35:35:99:1528,99,0	1/1:0,22:22:66.23:1076,66,0	1/1:1,25:26:78.27:1271,78,0	1/1:0,24:24:72.25:1174,72,0	1/1:0,20:20:51.17:832,51,0	1/1:0,13:13:30.10:488,30,0	0/0:15,0:15:45.15:0,45,909	0/0:22,0:22:66.23:0,66,1304	0/0:20,0:20:60.21:0,60,1219	0/0:24,0:24:69.22:0,69,1344	1/1:0,17:17:51.17:831,51,0	0/0:26,0:26:78.26:0,78,1469	0/0:23,0:23:66.23:0,66,1340	0/0:15,0:15:45.15:0,45,914	1/1:0,20:20:57.19:929,57,0	1/1:0,20:20:57.19:929,57,0	1/1:0,20:20:54.18:881,54,0	1/1:0,26:26:72.25:1174,72,0	0/0:26,0:26:78.27:0,78,1568	0/0:22,0:22:66.23:0,66,1335	0/0:13,0:13:36.12:0,36,727
chr10	74236586	.	G	GA	1615.73	PASS	AB=0.576;AC=11;AF=0.196;AN=56;BaseQRankSum=-0.817;DP=508;FS=1.014;HRun=10;HaplotypeScore=54.7778;InbreedingCoeff=0.7948;MQ=76.42;MQ0=0;MQRankSum=-0.967;QD=19.47;ReadPosRankSum=-1.274;VQSLOD=3.8900;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:50.90:0,51,414	0/0:9,0:9:26.94:0,27,217	0/0:15,0:14:5.99:0,6,124	0/0:12,0:11:7.26:0,7,61	0/0:21,0:21:56.93:0,57,468	0/0:23,0:24:61.95:0,62,498	0/0:15,0:15:32.93:0,33,266	0/0:28,3:30:14.17:0,14,478	1/1:2,10:12:24.06:256,24,0	0/0:22,0:22:59.93:0,60,492	0/0:25,0:27:38.86:0,39,494	1/1:2,7:9:12.02:120,12,0	1/1:3,7:11:26.88:261,27,0	0/0:12,1:13:1.12:0,1,212	0/0:13,0:13:35.96:0,36,296	0/0:22,2:24:18.92:0,19,362	0/0:20,0:20:47.92:0,48,394	0/0:21,0:21:59.90:0,60,488	0/0:23,0:24:48.97:0,49,376	0/0:22,1:23:30.96:0,31,461	0/0:16,0:16:41.92:0,42,345	0/1:5,13:19:22.91:379,0,23	1/1:3,14:18:44.95:462,45,0	1/1:1,13:14:30.06:312,30,0	0/0:16,0:16:47.95:0,48,394	0/0:26,0:26:56.85:0,57,464	0/0:18,0:18:53.94:0,54,443	0/0:13,0:14:37.99:0,38,301
chr10	74236696	.	G	GA	709.03	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=2.105;DP=439;FS=0.767;HRun=7;HaplotypeScore=90.9165;InbreedingCoeff=0.7785;MQ=52.01;MQ0=15;MQRankSum=-4.957;QD=17.73;ReadPosRankSum=-3.435;VQSLOD=2.8023;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:44.85:0,45,424	0/0:6,0:6:18.01:0,18,168	./.	0/0:8,0:4:5.99:0,6,52	0/0:26,0:25:44.95:0,45,434	0/0:15,0:14:33.03:0,33,313	0/0:23,0:19:30.04:0,30,289	1/1:14,10:21:41.98:437,42,0	0/0:12,0:12:14.98:0,15,143	0/0:20,0:18:44.92:0,45,404	0/0:8,0:8:18.02:0,18,173	0/0:5,0:5:2.78:0,3,24	0/0:11,0:11:16.99:0,17,170	0/0:11,0:11:20.95:0,21,201	0/0:10,0:10:26.89:0,27,232	0/0:10,0:10:21.03:0,21,202	0/0:26,0:24:51.01:0,51,491	1/1:6,10:16:31.44:392,31,0	0/0:17,0:15:38.88:0,39,356	0/0:25,0:25:69.10:0,69,665	0/0:15,0:15:24.02:0,24,231	0/0:14,0:14:24.03:0,24,231	0/0:23,0:23:30.03:0,30,289	0/0:11,0:10:18.03:0,18,174	0/0:21,0:21:27.02:0,27,260	0/0:23,0:22:50.92:0,51,475	0/0:22,0:22:56.97:0,57,526	0/0:2,0:1:3:0,3,29
chr10	74236708	.	C	CA	1852.10	PASS	AB=0.744;AC=26;AF=0.464;AN=56;BaseQRankSum=9.267;DP=508;FS=0.897;HRun=13;HaplotypeScore=94.3246;InbreedingCoeff=0.6053;MQ=56.92;MQ0=13;MQRankSum=-7.498;QD=6.69;ReadPosRankSum=-2.575;VQSLOD=2.2521;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,10:27:23.09:262,0,23	0/0:6,0:6:8.88:0,9,62	0/1:18,0:4:14.50:16,0,14	0/0:17,0:8:3.20:0,3,27	0/0:22,0:23:37.61:0,38,252	0/1:7,10:16:16.21:144,0,16	0/1:8,13:18:12.16:214,0,12	1/1:36,0:33:60.41:324,60,0	1/1:12,0:12:18.77:91,19,0	1/1:25,0:23:31.40:160,31,0	1/1:11,0:11:13.46:64,13,0	1/1:7,0:7:9.95:50,10,0	1/1:12,0:12:19.72:98,20,0	0/0:14,0:14:30.81:0,31,202	0/0:11,1:13:6.90:0,7,182	0/0:11,0:11:23.73:0,24,163	0/0:24,0:25:51.31:0,51,337	1/1:17,0:17:6.53:91,7,0	0/0:21,0:23:41.45:0,41,335	0/0:21,1:26:21.84:0,22,257	0/0:13,0:13:26.69:0,27,183	1/1:14,0:14:4.94:71,5,0	1/1:22,0:22:25.48:140,25,0	1/1:10,0:9:6.96:41,7,0	1/1:28,0:28:57.05:291,57,0	0/0:22,0:23:37.54:0,38,251	0/0:25,2:28:5.88:0,6,316	0/0:5,0:4:11.52:0,12,72
chr10	74236721	.	A	AAG	4655.32	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=9.377;DP=504;FS=2.136;HRun=0;HaplotypeScore=97.3228;InbreedingCoeff=0.9806;MQ=66.00;MQ0=7;MQRankSum=-10.311;QD=26.75;ReadPosRankSum=-0.975;VQSLOD=5.7739;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:53.72:0,54,362	0/0:4,0:4:12.03:0,12,143	0/0:28,0:12:20.26:0,20,197	0/0:23,0:13:12.55:0,13,141	0/0:22,0:21:60.09:0,60,664	0/0:19,0:18:40.71:0,41,306	0/0:21,0:19:38.75:0,39,245	1/1:9,23:32:82.02:1235,82,0	1/1:3,0:11:32.77:259,33,0	1/1:7,3:18:51.02:600,51,0	1/1:6,0:9:26.99:280,27,0	1/1:3,1:9:14.89:131,15,0	1/1:4,0:11:29.77:243,30,0	0/0:16,0:16:48.05:0,48,516	0/0:15,0:15:44.58:0,45,490	0/0:11,0:11:30.07:0,30,357	0/0:22,0:21:60.10:0,60,709	1/1:13,5:20:24.34:396,24,0	0/0:29,0:29:77.95:0,78,880	0/0:26,0:25:74.51:0,75,770	0/0:11,0:11:30.07:0,30,373	1/1:5,0:11:27.79:233,28,0	1/1:6,0:20:50.51:408,51,0	1/1:4,0:7:14.92:130,15,0	1/1:8,4:23:62.94:741,63,0	0/0:23,0:23:66.02:0,66,709	0/0:32,0:32:88.55:0,89,980	0/0:4,0:4:11.63:0,12,126
chr10	74236745	.	TC	T	4428.12	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=10.087;DP=516;FS=2.127;HRun=8;HaplotypeScore=83.5877;InbreedingCoeff=0.9787;MQ=74.44;MQ0=0;MQRankSum=-7.901;QD=20.89;ReadPosRankSum=0.147;VQSLOD=4.6887;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,19:25:51.02:477,51,0	0/0:4,0:4:9.03:0,9,109	0/0:18,0:17:35.88:0,36,372	0/0:26,0:20:43.24:0,43,391	0/0:26,0:26:69.20:0,69,819	0/0:21,0:21:57.15:0,57,665	0/0:24,0:24:54.02:0,54,605	1/1:16,14:31:53.67:485,54,0	1/1:1,13:14:38.96:357,39,0	1/1:3,17:20:53.90:476,54,0	1/1:1,12:13:33.05:318,33,0	1/1:1,8:10:22.97:195,23,0	1/1:2,13:15:33:308,33,0	0/0:18,0:18:51.11:0,51,579	0/0:17,0:17:51.10:0,51,589	0/0:10,0:10:30.07:0,30,339	0/0:20,0:20:54.08:0,54,633	1/1:3,18:21:48:446,48,0	0/0:20,0:20:45.12:0,45,523	0/0:26,0:25:72.07:0,72,812	0/0:9,0:9:27.08:0,27,326	1/1:1,14:15:44.97:415,45,0	1/1:6,14:20:44.97:415,45,0	1/1:1,3:4:9.01:87,9,0	1/1:4,20:24:53.64:450,54,0	0/0:20,1:21:31.17:0,31,625	0/0:38,0:37:99:0,108,1236	0/0:4,0:4:12.04:0,12,145
chr10	74237028	.	T	TC	8310.79	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-5.305;DP=574;FS=0.000;HRun=1;HaplotypeScore=66.9758;InbreedingCoeff=0.9961;MQ=89.28;MQ0=0;MQRankSum=-5.941;QD=40.15;ReadPosRankSum=0.656;VQSLOD=5.3082;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,1836	0/0:9,0:9:27.05:0,27,331	0/0:22,0:22:63.15:0,63,785	0/0:21,0:21:60.12:0,60,740	0/0:16,0:16:42.14:0,42,545	0/0:21,0:21:60.14:0,60,745	0/0:30,0:30:87.28:0,87,1129	1/1:3,29:32:90.26:1305,90,0	1/1:0,27:27:75.25:1124,75,0	1/1:1,15:16:42.14:628,42,0	1/1:0,6:6:18.06:269,18,0	1/1:0,21:21:63.21:944,63,0	1/1:1,24:25:63.21:943,63,0	0/0:26,0:26:63.19:0,63,803	0/0:21,0:21:57.17:0,57,725	0/0:9,0:9:27.09:0,27,351	0/0:26,0:26:78.25:0,78,1011	1/1:0,15:15:42.14:629,42,0	0/0:19,0:19:45.15:0,45,583	0/0:13,0:13:33.11:0,33,424	0/0:41,0:41:99:0,111,1438	1/1:1,10:11:27.09:404,27,0	1/1:0,15:15:42.14:627,42,0	1/1:0,20:20:57.19:854,57,0	1/1:2,17:19:39.13:583,39,0	0/0:18,0:18:48.16:0,48,623	0/0:20,0:20:51.14:0,51,646	0/0:5,0:5:15.05:0,15,195
chr10	74237234	.	T	TTTTG	11237.26	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=16.384;DP=760;FS=7.024;HRun=0;HaplotypeScore=156.5231;InbreedingCoeff=0.9971;MQ=69.93;MQ0=10;MQRankSum=-5.939;QD=37.09;ReadPosRankSum=-2.096;VQSLOD=4.3188;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,10:32:60.20:1258,60,0	0/0:18,0:15:39.13:0,39,658	0/0:33,0:26:47.95:0,48,744	0/0:34,0:26:42.14:0,42,693	0/0:30,0:29:61.43:0,61,1025	0/0:23,0:23:15.31:0,15,822	0/0:19,0:19:48.11:0,48,783	1/1:34,0:34:57.18:1122,57,0	1/1:36,0:35:78.27:1505,78,0	1/1:24,0:23:44.99:681,45,0	1/1:20,0:20:39.11:652,39,0	1/1:25,0:25:54.19:1037,54,0	1/1:25,0:25:63.21:1177,63,0	0/0:32,0:32:78.24:0,78,1264	0/0:35,0:35:78.25:0,78,1296	0/0:26,0:26:69.21:0,69,1111	0/0:35,0:34:84.29:0,84,1409	1/1:20,0:16:30.10:591,30,0	0/0:32,0:31:66.20:0,66,1059	0/0:28,0:27:63.20:0,63,1029	0/0:46,0:45:93.32:0,93,1565	1/1:24,0:24:54.18:999,54,0	1/1:16,0:16:42.14:753,42,0	1/1:16,0:16:27.98:510,28,0	1/1:27,0:27:54.17:953,54,0	0/0:29,0:28:21.26:0,21,1210	0/0:24,0:23:48.16:0,48,810	0/0:13,0:13:36.12:0,36,608
chr10	74237242	.	G	GTTTA	14915.73	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=2.626;DP=752;FS=9.848;HRun=0;HaplotypeScore=140.3839;InbreedingCoeff=0.9257;MQ=61.30;MQ0=17;MQRankSum=-8.889;QD=47.35;ReadPosRankSum=-2.209;VQSLOD=4.9777;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:33:82.69:762,0,83	0/0:18,0:15:39.13:0,39,731	0/0:31,0:22:56.34:0,56,943	0/0:29,0:19:48.12:0,48,831	0/0:30,0:29:81.01:0,81,1315	0/0:23,0:23:44.11:0,44,1008	0/0:20,0:20:60.08:0,60,993	1/1:2,27:31:87.08:1838,87,0	1/1:5,34:39:78.27:2056,78,0	1/1:10,10:19:23.21:991,23,0	1/1:13,10:22:50.29:889,50,0	1/1:1,22:24:54.19:1421,54,0	1/1:2,26:30:63.15:1605,63,0	0/0:31,0:31:87.09:0,87,1522	0/0:35,0:35:99:0,105,1700	0/0:25,0:25:75.23:0,75,1342	0/0:35,0:34:93.25:0,93,1653	1/1:6,13:15:45.01:940,45,0	0/0:31,0:28:78.20:0,78,1326	0/0:28,0:27:69.21:0,69,1235	0/0:39,0:37:99:0,108,1881	1/1:3,23:26:60.01:1385,60,0	1/1:3,15:18:39.13:950,39,0	1/1:3,18:21:28.36:667,28,0	1/1:11,16:26:60.13:1410,60,0	0/0:27,0:26:58.84:0,59,1422	0/0:22,0:21:54.14:0,54,955	0/0:13,0:13:36.12:0,36,682
chr10	74237252	.	GGT	G	478.25	PASS	AB=0.934;AC=15;AF=0.268;AN=56;BaseQRankSum=4.814;DP=759;FS=8.186;HRun=0;HaplotypeScore=162.4695;InbreedingCoeff=-0.1940;MQ=55.19;MQ0=22;MQRankSum=-1.332;QD=1.27;ReadPosRankSum=0.277;VQSLOD=1.9219;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:31:10.72:26,0,11	0/0:16,3:17:18.06:0,18,264	0/0:27,0:16:3.01:0,3,43	0/0:30,0:18:10.28:0,10,122	0/1:28,2:29:17.75:18,0,586	0/1:19,2:22:0.30:0,0,574	0/0:21,0:21:24.08:0,24,354	0/0:32,0:31:9.76:0,10,224	0/0:35,1:34:19.56:0,20,301	1/1:13,3:15:1.86:136,2,0	0/1:18,2:18:5.66:121,0,6	0/1:22,1:23:13.73:14,0,220	0/1:29,1:30:28.55:29,0,187	0/1:29,3:32:8.48:8,0,673	0/0:35,0:35:58.05:0,58,962	0/0:25,1:26:31.84:0,32,873	0/0:33,2:34:28.87:0,29,828	0/1:21,0:17:11.83:12,0,40	0/0:27,2:26:4.82:0,5,500	0/0:28,2:29:1.81:0,2,462	0/1:48,2:50:32.04:32,0,887	0/1:21,4:25:58.10:58,0,291	0/1:18,2:20:4.50:4,0,268	0/0:23,0:24:22.96:0,23,249	0/1:18,4:22:8.71:88,0,9	0/1:29,0:28:75.93:76,0,360	0/0:23,0:21:14.18:0,14,453	0/0:13,0:13:12.02:0,12,148
chr10	74237268	.	T	TGTGTGTGT	761.75	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=1.957;DP=717;FS=0.754;HRun=0;HaplotypeScore=226.4040;InbreedingCoeff=0.3192;MQ=51.06;MQ0=24;MQRankSum=-6.134;QD=5.77;ReadPosRankSum=-6.195;VQSLOD=0.9744;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:31:15.64:0,16,169	0/0:15,0:12:18.05:0,18,319	0/0:14,0:8:2.80:0,3,57	0/0:18,0:6:5.79:0,6,79	0/0:28,0:27:47.93:0,48,860	0/0:25,0:25:47.91:0,48,812	0/0:24,0:24:0.69:0,1,356	1/1:31,0:28:32.63:325,33,0	0/0:32,0:30:47.69:0,48,767	0/1:19,0:18:99:201,0,126	0/1:21,0:19:81.54:82,0,88	0/0:20,0:20:36.25:0,36,637	0/0:26,0:26:41.77:0,42,686	0/0:33,0:33:55:0,55,1013	0/0:33,0:33:63.21:0,63,1306	0/0:27,0:27:60.20:0,60,1312	0/0:30,0:29:60.14:0,60,1154	1/1:15,7:21:11.96:201,12,0	0/0:21,0:18:14.26:0,14,662	0/0:23,0:22:36.10:0,36,697	0/0:56,0:54:70.84:0,71,1387	0/0:26,0:26:42.13:0,42,801	0/0:22,0:21:30.10:0,30,659	0/0:31,0:31:41.13:0,41,667	0/1:22,0:20:57.52:58,0,130	0/0:26,0:25:20.99:0,21,525	0/0:21,0:19:36.09:0,36,632	0/1:16,0:16:38.58:39,0,90
chr10	74237275	.	GTGTGTGTCTGTC	G	627.13	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=7.478;DP=704;FS=7.179;HRun=0;HaplotypeScore=250.6561;InbreedingCoeff=0.1647;MQ=51.04;MQ0=22;MQRankSum=-2.005;QD=3.65;ReadPosRankSum=-1.589;VQSLOD=1.1076;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,21:36:12.80:530,13,0	0/0:15,0:12:27.04:0,27,756	0/0:11,0:4:12.03:0,12,157	0/0:23,0:5:14.91:0,15,114	0/0:26,0:25:54.12:0,54,2004	0/0:23,0:23:57.13:0,57,1823	0/0:23,0:23:48.07:0,48,1279	0/0:30,0:27:71.41:0,71,688	0/1:33,0:31:68.94:69,0,1328	0/0:18,0:17:33.63:0,34,744	0/0:23,0:21:16.02:0,16,192	0/1:25,0:25:37.79:38,0,1362	0/1:25,0:25:77.40:77,0,1005	0/0:29,0:29:80.66:0,81,2967	0/0:32,0:32:90.26:0,90,3752	0/0:28,0:28:81.20:0,81,3317	0/0:29,0:28:74.57:0,75,2446	0/0:23,0:22:36.01:0,36,829	0/0:20,0:18:48.11:0,48,1368	0/0:23,0:22:50.61:0,51,1813	0/0:56,0:55:99:0,125,4414	0/0:26,0:26:10.24:0,10,2019	0/0:21,0:20:16.14:0,16,1560	0/1:31,0:31:36.24:36,0,1795	0/1:20,0:18:8:8,0,187	0/0:25,0:24:68.86:0,69,1642	0/0:18,0:16:42.11:0,42,1556	0/0:10,0:10:24.03:0,24,717
chr10	74237279	.	G	GTCTGTCTGTC	1290.57	PASS	AB=0.953;AC=10;AF=0.179;AN=56;BaseQRankSum=2.578;DP=703;FS=7.377;HRun=0;HaplotypeScore=236.4563;InbreedingCoeff=0.4659;MQ=51.73;MQ0=21;MQRankSum=-0.280;QD=7.05;ReadPosRankSum=-4.871;VQSLOD=0.6142;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:35:6.43:6,0,158	0/0:15,0:13:30.07:0,30,578	0/0:11,0:5:14.96:0,15,134	0/0:23,0:7:16.26:0,16,169	0/0:24,0:23:57.05:0,57,1236	0/0:23,0:23:25.69:0,26,1116	0/0:21,0:21:48.15:0,48,883	0/0:29,0:26:36.68:0,37,581	0/0:32,0:30:34.53:0,35,677	1/1:5,12:23:48.39:756,48,0	1/1:7,0:23:17.88:257,18,0	0/1:27,0:27:47.24:47,0,446	0/0:24,0:24:17.36:0,17,513	0/0:28,0:28:12.61:0,13,1744	0/0:31,0:31:90.27:0,90,2176	0/0:27,0:27:81.24:0,81,1972	0/0:31,0:30:46.85:0,47,1617	0/1:22,0:21:30.61:31,0,328	0/0:20,0:18:43.79:0,44,785	0/0:19,0:18:13.51:0,14,1009	0/0:55,0:55:63.24:0,63,2826	0/0:26,0:26:48.73:0,49,675	0/0:21,0:20:10.77:0,11,506	0/0:31,0:31:42.36:0,42,826	1/1:7,10:20:5.01:254,5,0	0/1:20,0:25:93.09:93,0,994	0/0:17,0:15:40.38:0,40,875	0/0:10,0:10:24.06:0,24,483
chr10	74237892	.	GA	G	305.09	PASS	AB=0.654;AC=1;AF=0.018;AN=56;BaseQRankSum=0.876;DP=592;FS=8.124;HRun=9;HaplotypeScore=107.2617;InbreedingCoeff=0.0524;MQ=44.30;MQ0=34;MQRankSum=-0.595;QD=8.97;ReadPosRankSum=0.841;VQSLOD=1.7787;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:16,18:33:12.66:380,0,13	0/0:6,0:6:11.62:0,12,110	0/0:53,0:9:26.96:0,27,257	0/0:73,0:11:15.28:0,15,195	0/0:19,0:18:41.44:0,41,456	0/0:16,0:15:31.99:0,32,333	0/0:14,0:13:28.88:0,29,305	0/0:31,0:27:52.87:0,53,530	0/0:14,0:14:33.01:0,33,352	0/0:27,0:27:62.68:0,63,631	0/0:22,0:21:46.68:0,47,485	0/0:13,0:13:33.67:0,34,345	0/0:16,0:16:44.13:0,44,476	0/0:7,0:7:10.20:0,10,78	0/0:14,0:14:27.04:0,27,271	0/0:14,0:14:27.98:0,28,290	0/0:34,0:30:66.32:0,66,673	0/0:18,0:18:38.55:0,39,430	0/0:15,0:12:23.68:0,24,276	0/0:19,0:18:34.71:0,35,379	0/0:7,0:7:9.03:0,9,104	0/0:16,0:16:37.01:0,37,346	0/0:13,0:13:33.56:0,34,371	0/0:19,0:18:38.99:0,39,406	0/0:24,0:23:42.73:0,43,433	0/0:16,0:16:34.56:0,35,370	0/0:20,0:20:32.24:0,32,307	0/0:17,0:12:24.54:0,25,277
chr10	74237918	.	A	ACAAAAC	4877.85	PASS	AB=0.869;AC=15;AF=0.268;AN=56;BaseQRankSum=6.576;DP=644;FS=25.752;HRun=0;HaplotypeScore=159.0853;InbreedingCoeff=0.1565;MQ=46.21;MQ0=30;MQRankSum=-10.482;QD=18.07;ReadPosRankSum=8.700;VQSLOD=2.4935;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:82.39:0,82,1016	0/0:10,0:10:30.09:0,30,512	0/0:56,0:11:25.66:0,26,230	0/0:63,0:11:10.91:0,11,102	0/0:21,0:19:51.12:0,51,797	0/0:22,0:21:45.10:0,45,717	0/0:9,0:8:21.07:0,21,351	0/1:33,0:29:68.44:68,0,355	0/1:13,2:18:11.75:458,0,12	1/1:32,0:33:8.58:586,9,0	0/1:23,0:23:75.04:158,0,75	1/1:15,4:18:21.97:590,22,0	0/1:13,2:18:24.43:496,0,24	0/0:8,0:8:19.96:0,20,306	0/0:12,0:11:30.08:0,30,510	0/1:16,0:17:13.52:14,0,664	0/0:33,0:29:72.22:0,72,1238	0/1:21,0:21:99:311,0,142	0/0:17,0:16:45.15:0,45,759	0/0:18,0:18:47.88:0,48,819	0/0:11,0:11:30.66:0,31,445	0/1:12,7:20:37.62:669,0,38	0/1:13,4:19:39.80:524,0,40	1/1:18,6:24:9.44:676,9,0	0/1:19,0:19:85.44:328,0,85	0/0:22,0:21:29.32:0,29,816	0/0:17,0:16:39.07:0,39,635	0/0:17,0:12:26.80:0,27,322
chr10	74237923	.	A	AAAAAAAC	10323.56	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=5.940;DP=627;FS=74.296;HRun=0;HaplotypeScore=204.5873;InbreedingCoeff=0.6538;MQ=47.90;MQ0=24;MQRankSum=-8.790;QD=34.30;ReadPosRankSum=-1.802;VQSLOD=1.5351;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:45.72:0,46,426	0/0:11,0:11:25.14:0,25,278	0/0:45,0:11:16.46:0,16,144	0/0:50,0:11:5.20:0,5,75	0/0:23,0:21:17.42:0,17,163	0/0:20,0:19:9.80:0,10,159	0/0:11,0:11:8.31:0,8,266	1/1:31,0:27:71.75:977,72,0	1/1:6,2:19:29.92:660,30,0	1/1:23,0:29:81.03:1390,81,0	1/1:12,0:21:53.78:963,54,0	1/1:13,0:18:53.39:956,53,0	1/1:19,0:21:53.78:888,54,0	0/1:8,0:8:25.17:25,0,162	0/0:14,0:13:19.72:0,20,248	0/1:18,0:18:52.62:53,0,344	0/0:33,0:30:16.34:0,16,421	1/1:19,0:22:56.85:978,57,0	0/0:17,0:17:3.72:0,4,225	0/0:19,0:19:22.13:0,22,301	0/1:11,0:11:21.77:22,0,145	1/1:11,0:20:53.71:904,54,0	1/1:15,0:19:53.69:760,54,0	1/1:18,0:23:41.77:709,42,0	1/1:11,0:19:56.96:984,57,0	0/0:24,0:23:31.03:0,31,375	0/0:17,0:16:20.01:0,20,267	0/1:15,0:10:46:55,0,46
chr10	74238894	.	T	TC	5569.38	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-6.441;DP=662;FS=4.382;HRun=0;HaplotypeScore=112.8696;InbreedingCoeff=0.9002;MQ=89.35;MQ0=0;MQRankSum=-8.011;QD=33.15;ReadPosRankSum=1.181;VQSLOD=4.4068;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:87.96:0,88,674	0/0:14,0:14:41.28:0,41,263	0/0:27,0:27:57.74:0,58,394	0/0:24,0:24:69.05:0,69,903	0/0:29,0:29:84.66:0,85,534	0/0:18,0:18:53.17:0,53,347	0/0:22,0:22:53.90:0,54,366	0/0:23,0:23:11.44:0,11,262	1/1:4,26:30:81.17:1071,81,0	0/0:31,0:31:67.27:0,67,459	0/0:22,0:22:56.34:0,56,362	1/1:0,25:25:63.19:789,63,0	1/1:2,28:30:87.24:1146,87,0	0/0:28,0:28:75.93:0,76,538	0/0:23,0:23:58.69:0,59,377	0/0:16,0:16:47.11:0,47,298	0/0:36,0:36:70.43:0,70,599	0/0:13,0:13:38.57:0,39,266	0/1:10,0:10:8.14:8,0,108	0/0:21,0:21:59.15:0,59,402	0/0:42,0:42:99:0,112,738	1/1:1,25:26:68.40:932,68,0	1/1:0,18:18:45.12:571,45,0	1/1:3,26:29:77.10:1052,77,0	0/0:23,0:23:38.80:0,39,375	0/0:22,0:22:56.75:0,57,395	0/0:17,0:17:38.08:0,38,311	0/0:4,0:4:11.83:0,12,78
chr10	74239890	.	TCC	T	2095.66	PASS	AB=0.782;AC=17;AF=0.304;AN=56;BaseQRankSum=-3.571;DP=475;FS=6.240;HRun=12;HaplotypeScore=89.5022;InbreedingCoeff=0.5877;MQ=82.09;MQ0=0;MQRankSum=-0.506;QD=11.27;ReadPosRankSum=3.637;VQSLOD=2.2341;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:9,2:15:8.16:8,0,71	0/0:7,0:8:11.49:0,11,87	0/0:17,0:18:25.03:0,25,362	0/0:26,0:24:13.87:0,14,261	0/0:14,0:18:16.66:0,17,117	0/1:4,2:13:9.79:10,0,47	0/0:4,1:17:2.44:0,2,75	0/0:18,0:18:37.25:0,37,268	1/1:3,14:19:47.57:451,48,0	0/0:20,0:20:55.81:0,56,395	0/0:16,0:16:44.91:0,45,365	1/1:4,20:27:37.37:529,37,0	1/1:5,17:22:32.76:317,33,0	0/0:13,0:16:31.47:0,31,246	0/0:16,1:17:14.39:0,14,346	0/1:13,1:15:1:1,0,261	0/0:9,0:16:35.98:0,36,269	0/0:21,0:21:59.91:0,60,504	0/0:11,0:13:17.03:0,17,192	0/0:16,0:20:34.55:0,35,320	0/0:15,0:18:26.48:0,26,235	1/1:3,5:8:15.03:152,15,0	1/1:3,14:17:33.06:336,33,0	1/1:3,16:19:45.08:458,45,0	0/0:20,0:20:50.88:0,51,404	0/1:20,1:21:12.50:13,0,130	0/1:7,1:10:10.64:11,0,116	0/0:5,0:6:11.52:0,12,125
chr10	74240384	.	TA	T	2087.91	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=15.199;DP=712;FS=2.982;HRun=2;HaplotypeScore=102.4763;InbreedingCoeff=0.9963;MQ=78.73;MQ0=0;MQRankSum=-8.566;QD=18.16;ReadPosRankSum=1.977;VQSLOD=3.9741;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,2048	0/0:20,0:20:57.19:0,57,852	0/0:19,0:19:57.16:0,57,829	0/0:17,0:17:48.13:0,48,685	0/0:24,0:24:66.18:0,66,964	0/0:19,0:19:57.18:0,57,832	0/0:36,0:36:99:0,108,1595	1/1:6,19:26:59.70:455,60,0	0/0:22,0:22:66.22:0,66,989	1/1:3,24:29:77.03:661,77,0	1/1:2,19:21:50.73:404,51,0	0/0:28,0:28:81.27:0,81,1211	0/0:27,0:27:81.26:0,81,1193	0/0:28,0:28:78.25:0,78,1147	0/0:25,0:25:75.25:0,75,1106	0/0:28,0:28:81.27:0,81,1214	0/0:32,0:32:96.33:0,96,1439	1/1:1,14:15:38.93:330,39,0	0/0:25,0:25:75.25:0,75,1103	0/0:22,0:22:66.22:0,66,989	0/0:38,0:38:99:0,108,1619	0/0:27,0:27:78.26:0,78,1169	0/0:25,0:25:69.23:0,69,1030	0/0:28,0:28:81.27:0,81,1210	1/1:3,21:24:50.74:412,51,0	0/0:28,1:29:50.88:0,51,1119	0/0:26,0:26:75.25:0,75,1121	0/0:5,0:5:15.01:0,15,200
chr10	74240388	.	TA	T	2560.81	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=15.218;DP=697;FS=1.825;HRun=1;HaplotypeScore=99.7092;InbreedingCoeff=0.9928;MQ=81.51;MQ0=0;MQRankSum=-6.268;QD=25.11;ReadPosRankSum=1.573;VQSLOD=3.7399;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,2081	0/0:18,0:18:54.18:0,54,861	0/0:21,0:21:60.02:0,60,884	0/0:19,0:19:50.77:0,51,708	0/0:24,0:24:63.21:0,63,1006	0/0:18,0:18:54.18:0,54,863	0/0:36,0:36:99:0,108,1680	1/1:1,19:20:60.06:554,60,0	0/0:22,0:22:66.21:0,66,1028	1/1:3,24:27:80.49:815,80,0	1/1:0,19:19:51.04:484,51,0	0/0:26,0:26:78.27:0,78,1247	0/0:28,0:28:84.24:0,84,1312	0/0:27,0:27:78.26:0,78,1246	0/0:25,0:25:75.26:0,75,1199	0/0:29,0:29:87.30:0,87,1388	0/0:32,0:32:96.28:0,96,1477	1/1:1,14:15:39.07:391,39,0	0/0:26,0:26:78.24:0,78,1211	0/0:22,0:22:66.21:0,66,1032	0/0:40,0:40:99:0,117,1822	0/0:28,0:28:81.28:0,81,1291	0/0:24,0:24:66.23:0,66,1055	0/0:27,0:27:81.25:0,81,1266	1/1:0,21:21:51.04:492,51,0	0/0:27,1:28:46.11:0,46,1166	0/0:25,0:25:72.23:0,72,1124	0/0:5,0:5:12.04:0,12,192
chr10	74240905	.	AT	A	1228.51	PASS	AB=0.899;AC=19;AF=0.339;AN=56;BaseQRankSum=13.654;DP=502;FS=4.483;HRun=1;HaplotypeScore=69.4559;InbreedingCoeff=0.5976;MQ=89.31;MQ0=0;MQRankSum=-3.174;QD=6.68;ReadPosRankSum=2.055;VQSLOD=0.9664;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,3:24:37.93:176,0,38	0/0:12,0:12:33.10:0,33,501	0/0:29,0:29:87.21:0,87,1203	0/0:24,0:22:63.16:0,63,841	0/0:19,0:19:30.03:0,30,428	0/0:20,0:20:54.17:0,54,817	0/0:18,0:18:54.17:0,54,831	0/1:14,0:14:23.81:71,0,24	0/1:21,0:21:4.11:115,0,4	1/1:8,0:8:13.32:63,13,0	1/1:10,3:13:8.17:118,8,0	1/1:22,0:22:25.65:197,26,0	1/1:17,0:17:38.67:179,39,0	0/0:19,0:19:54.16:0,54,815	0/0:15,0:15:42.14:0,42,666	0/0:21,0:21:60.20:0,60,933	0/0:38,0:38:99:0,111,1729	1/1:19,0:19:43.75:164,44,0	0/0:23,0:23:60.14:0,60,810	0/0:15,0:15:24.08:0,24,374	0/0:17,0:17:45.14:0,45,687	0/1:3,3:6:12.76:28,0,13	1/1:3,1:4:5.49:44,5,0	1/1:20,0:20:44.83:193,45,0	0/1:15,1:16:14.90:78,0,15	0/0:17,0:17:27.22:0,27,509	0/0:24,0:24:66.21:0,66,1004	0/0:7,0:7:21.07:0,21,334
chr10	74240906	.	TC	T	4347.73	PASS	AB=0.601;AC=22;AF=0.393;AN=56;BaseQRankSum=9.390;DP=540;FS=8.161;HRun=6;HaplotypeScore=63.1186;InbreedingCoeff=0.7974;MQ=86.19;MQ0=0;MQRankSum=-3.063;QD=20.04;ReadPosRankSum=2.171;VQSLOD=3.9251;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,15:29:8.41:496,8,0	0/0:13,0:13:30.10:0,30,395	0/0:28,0:28:66.21:0,66,849	0/0:26,0:23:48.68:0,49,697	0/0:19,0:19:42.06:0,42,467	0/0:19,0:19:54.15:0,54,670	0/0:18,0:18:51.15:0,51,656	0/1:7,12:19:28.53:304,0,29	1/1:2,19:21:48.12:515,48,0	0/1:3,7:10:5.71:172,0,6	1/1:10,8:18:1.27:195,1,0	1/1:1,21:22:54.13:580,54,0	1/1:0,17:17:45.11:483,45,0	0/0:19,0:19:57.18:0,57,737	0/0:16,0:16:48.13:0,48,604	0/0:22,0:22:66.18:0,66,826	0/0:37,0:37:99:0,111,1406	1/1:0,19:19:54.14:580,54,0	0/0:22,0:22:48.14:0,48,606	0/0:15,0:15:42.05:0,42,460	0/0:19,0:19:45.14:0,45,576	1/1:11,2:13:6:64,6,0	1/1:8,1:9:9:88,9,0	1/1:0,20:20:54.14:580,54,0	1/1:7,13:20:27.06:290,27,0	0/0:17,1:18:18.87:0,19,534	0/0:24,0:24:66.17:0,66,823	0/0:8,0:8:21.07:0,21,276
chr10	74241007	.	TAAAAGA	T	1333.42	PASS	AB=0.743;AC=4;AF=0.071;AN=56;BaseQRankSum=7.592;DP=473;FS=51.736;HRun=0;HaplotypeScore=111.8015;InbreedingCoeff=-0.0787;MQ=67.97;MQ0=0;MQRankSum=-7.378;QD=22.60;ReadPosRankSum=1.694;VQSLOD=1.1710;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.25:0,72,2616	0/0:4,0:4:12.04:0,12,441	0/0:12,0:12:32.97:0,33,957	0/0:13,0:13:16.19:0,16,976	0/0:27,0:27:81.28:0,81,2951	0/0:17,0:17:51.16:0,51,1722	0/0:17,0:17:51.18:0,51,1815	0/0:10,0:10:30.10:0,30,1049	0/0:18,0:18:54.19:0,54,1861	0/1:8,6:14:99:392,0,829	0/1:12,7:20:99:514,0,1238	0/0:16,0:15:45.15:0,45,1624	0/0:13,0:13:36.12:0,36,1292	0/0:18,0:18:51.11:0,51,1669	0/0:13,0:13:33.11:0,33,1134	0/0:11,0:11:33.11:0,33,1198	0/0:32,0:32:93.32:0,93,3365	0/1:9,0:10:32.39:32,0,732	0/0:28,0:28:84.28:0,84,2906	0/0:20,0:20:60.21:0,60,2164	0/0:17,0:17:48.16:0,48,1703	0/0:17,0:17:51.18:0,51,1714	0/0:13,0:13:39.13:0,39,1268	0/0:20,0:20:54.19:0,54,1910	0/1:7,6:14:99:505,0,611	0/0:23,0:23:69.24:0,69,2438	0/0:18,0:18:54.19:0,54,1878	0/0:13,0:13:39.13:0,39,1326
chr10	74241024	.	T	TC	388.44	PASS	AB=0.824;AC=4;AF=0.071;AN=56;BaseQRankSum=7.711;DP=457;FS=39.359;HRun=0;HaplotypeScore=63.6376;InbreedingCoeff=-0.0803;MQ=57.27;MQ0=0;MQRankSum=-7.257;QD=5.55;ReadPosRankSum=0.659;VQSLOD=1.3621;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.20:0,66,878	0/0:1,0:1:3.01:0,3,42	0/0:13,0:11:32.92:0,33,405	0/0:12,0:10:30.10:0,30,410	0/0:32,0:32:93.27:0,93,1269	0/0:15,0:15:45.15:0,45,622	0/0:18,0:18:54.13:0,54,700	0/0:16,0:16:44.88:0,45,599	0/0:14,0:14:42.12:0,42,568	0/1:12,6:17:99:196,0,404	0/1:17,4:21:99:158,0,438	0/0:15,0:14:39.13:0,39,544	0/0:13,0:13:33.11:0,33,461	0/0:16,0:16:44.34:0,44,574	0/0:11,0:11:30.10:0,30,410	0/0:13,0:13:36.11:0,36,479	0/0:30,0:30:87.24:0,87,1170	0/1:13,1:14:6.77:7,0,367	0/0:26,0:26:75.23:0,75,1026	0/0:18,0:18:54.17:0,54,738	0/0:14,0:14:39.13:0,39,545	0/0:12,0:12:36.11:0,36,486	0/0:11,0:11:33.11:0,33,455	0/0:19,0:19:51.17:0,51,712	0/1:12,5:17:99:133,0,364	0/0:16,0:16:45.14:0,45,611	0/0:17,0:17:51.12:0,51,667	0/0:13,0:13:39.13:0,39,545
chr10	74242375	.	CGT	C	1269.07	PASS	AB=0.944;AC=17;AF=0.327;AN=52;BaseQRankSum=5.315;DP=738;FS=2.709;HRun=0;HaplotypeScore=96.3685;InbreedingCoeff=0.4532;MQ=71.26;MQ0=2;MQRankSum=2.179;QD=3.16;ReadPosRankSum=3.390;VQSLOD=2.1277;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,1:44:9.21:9,0,151	0/0:11,0:11:12:0,12,119	./.	./.	0/0:17,0:18:3.90:0,4,189	0/0:17,0:17:24.04:0,24,298	0/1:34,4:38:29.61:30,0,350	0/0:30,0:30:26.79:0,27,221	1/1:20,18:39:25.32:313,25,0	0/0:31,0:31:32.85:0,33,288	0/0:12,0:12:6.01:0,6,64	1/1:16,6:24:14.70:126,15,0	1/1:19,9:30:28.12:243,28,0	0/1:26,1:27:41.93:42,0,301	0/0:28,2:30:12.28:0,12,551	0/1:19,2:21:35.74:36,0,240	0/0:22,0:22:30.01:0,30,342	0/0:19,0:17:24.61:0,25,205	0/0:20,0:20:8.89:0,9,82	0/0:15,0:15:15.04:0,15,203	0/1:89,4:93:62.32:62,0,664	1/1:10,5:15:14.87:145,15,0	1/1:21,4:25:2.94:33,3,0	1/1:24,20:45:38.93:408,39,0	0/0:19,0:19:11.97:0,12,164	0/0:22,0:22:15.03:0,15,203	0/0:9,0:9:21.01:0,21,267	0/0:2,0:2:6.02:0,6,86
chr10	74243440	.	T	TTTTG	1542.79	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=-0.811;DP=639;FS=14.727;HRun=0;HaplotypeScore=124.6040;InbreedingCoeff=0.5441;MQ=64.65;MQ0=3;MQRankSum=-0.529;QD=19.05;ReadPosRankSum=1.330;VQSLOD=2.7559;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:37:66.20:1597,66,0	0/0:10,0:10:30.08:0,30,486	0/1:21,0:9:0.13:0,0,101	0/0:24,0:12:10.95:0,11,93	0/0:33,0:33:89.36:0,89,1291	0/0:24,0:24:64.25:0,64,1076	0/0:23,0:23:68.98:0,69,1039	0/0:38,0:37:23.53:0,24,388	0/0:21,0:21:22.68:0,23,419	0/0:27,0:24:61.25:0,61,430	0/0:18,0:18:21.50:0,22,234	0/0:22,0:22:29.65:0,30,545	0/0:19,0:18:47.73:0,48,418	0/0:19,0:19:57.09:0,57,804	0/0:25,0:25:72.12:0,72,1068	0/0:19,0:19:48.13:0,48,735	0/0:36,0:36:96.27:0,96,1606	0/0:8,0:5:3.45:0,3,26	0/0:30,0:30:66.17:0,66,984	0/0:25,0:25:72.05:0,72,1073	0/0:20,0:19:56.15:0,56,868	0/0:19,0:19:17.50:0,18,333	0/1:12,0:12:48.21:48,0,50	1/1:11,0:11:2.73:12,3,0	0/0:26,0:23:50.47:0,50,414	0/0:31,0:31:90.14:0,90,1388	0/0:34,0:34:96.12:0,96,1500	0/0:7,0:7:20.99:0,21,316
chr10	74245013	.	GA	G	3117.82	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.756;DP=555;FS=0.762;HRun=10;HaplotypeScore=70.7842;InbreedingCoeff=0.9654;MQ=74.23;MQ0=0;MQRankSum=-3.256;QD=20.79;ReadPosRankSum=-0.770;VQSLOD=4.2007;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:59.98:0,60,636	0/0:8,0:8:21.05:0,21,225	0/0:7,0:6:6.02:0,6,66	0/0:22,1:22:9.14:0,9,336	0/0:18,0:19:56.98:0,57,604	0/0:31,1:32:64.17:0,64,920	0/0:27,1:28:40.12:0,40,671	1/1:7,26:33:74.92:642,75,0	1/1:1,16:17:50.97:438,51,0	0/0:32,0:33:71.99:0,72,757	0/0:14,0:14:39.10:0,39,429	1/1:4,14:18:50.97:439,51,0	1/1:2,13:15:41.97:360,42,0	0/0:14,0:14:36.10:0,36,398	0/0:19,0:19:48.13:0,48,531	0/0:14,1:16:15.89:0,16,386	0/0:23,0:23:63.14:0,63,678	1/1:2,16:18:41.99:365,42,0	0/0:25,2:27:17.06:0,17,637	0/0:24,1:25:43.24:0,43,701	0/0:12,0:12:33.07:0,33,356	1/1:6,13:19:24.94:383,25,0	1/1:3,21:24:65.96:568,66,0	1/1:2,4:6:14.99:129,15,0	0/0:20,1:21:34.10:0,34,598	0/0:24,0:25:69.01:0,69,736	0/0:28,0:27:81.18:0,81,879	0/0:8,0:8:24.06:0,24,265
chr10	74245066	.	A	AT	4762.35	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.138;DP=557;FS=1.253;HRun=1;HaplotypeScore=66.0661;InbreedingCoeff=0.9850;MQ=75.28;MQ0=0;MQRankSum=-6.384;QD=40.70;ReadPosRankSum=-0.399;VQSLOD=5.1901;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.19:0,63,805	0/0:3,0:3:9.03:0,9,117	0/0:10,0:10:30.08:0,30,360	0/0:13,0:13:36.08:0,36,438	0/0:28,0:28:84.27:0,84,1090	0/0:31,0:31:87.27:0,87,1115	0/0:17,0:17:48.16:0,48,623	0/0:28,0:28:81.24:0,81,1005	1/1:2,25:27:78.26:1156,78,0	0/0:30,0:30:87.28:0,87,1119	0/0:20,0:20:54.18:0,54,700	1/1:3,17:20:57.19:843,57,0	1/1:4,16:20:60.16:823,60,0	0/0:16,0:16:48.14:0,48,609	0/0:18,0:18:54.18:0,54,701	0/0:16,0:16:48.14:0,48,609	0/0:22,0:22:59.98:0,60,753	0/0:19,0:19:42.14:0,42,544	0/0:18,0:18:51.16:0,51,651	0/0:25,0:25:75.23:0,75,959	0/0:10,0:10:27.09:0,27,348	1/1:2,17:19:57.19:844,57,0	1/1:2,21:23:67.44:871,67,0	1/1:1,7:8:15.52:225,16,0	0/0:23,0:23:66.20:0,66,843	0/0:24,0:24:72.23:0,72,935	0/0:32,0:31:96.31:0,96,1246	0/0:13,0:13:33.05:0,33,371
chr10	74245135	.	AT	A	5551.66	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.591;DP=560;FS=0.334;HRun=7;HaplotypeScore=66.7680;InbreedingCoeff=0.9962;MQ=77.33;MQ0=0;MQRankSum=-3.357;QD=26.06;ReadPosRankSum=3.694;VQSLOD=5.4295;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:66.15:673,66,0	0/0:10,0:10:30.10:0,30,377	0/0:16,0:16:38.98:0,39,449	0/0:14,0:14:36:0,36,406	0/0:21,0:21:45.14:0,45,566	0/0:24,0:24:66.21:0,66,830	0/0:24,0:24:69.22:0,69,868	0/0:32,0:32:59.82:0,60,1041	1/1:2,18:20:13.37:452,13,0	1/1:4,27:31:78.63:787,79,0	1/1:1,19:20:57.13:581,57,0	1/1:3,24:27:69.15:703,69,0	1/1:2,21:23:63.14:643,63,0	0/0:10,0:10:30.10:0,30,378	0/0:18,0:18:51.16:0,51,642	0/0:21,1:22:32.58:0,33,712	0/0:17,0:17:48.15:0,48,604	0/0:10,0:10:30.10:0,30,377	0/0:23,0:24:57.01:0,57,694	0/0:26,0:26:75.23:0,75,932	0/0:15,0:15:45.11:0,45,539	1/1:1,19:20:48.11:490,48,0	1/1:0,19:19:54.12:551,54,0	1/1:0,11:11:30.07:306,30,0	1/1:2,14:16:36.08:367,36,0	0/0:25,0:25:66.21:0,66,830	0/0:23,0:23:66.21:0,66,828	0/0:16,0:16:48.02:0,48,581
chr10	74245409	.	CCA	C	98.69	PASS	AB=0.897;AC=6;AF=0.107;AN=56;BaseQRankSum=4.459;DP=471;FS=26.547;HRun=0;HaplotypeScore=76.3660;InbreedingCoeff=0.2062;MQ=76.75;MQ0=9;MQRankSum=0.579;QD=2.15;ReadPosRankSum=1.499;VQSLOD=0.1776;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72:0,72,1079	0/0:6,0:6:18.05:0,18,305	0/0:54,0:19:9.14:0,9,323	0/0:46,0:22:43.70:0,44,435	0/0:15,0:15:45.07:0,45,601	0/0:18,0:18:51.01:0,51,660	0/0:12,0:12:29.47:0,29,468	0/0:19,0:19:51.27:0,51,609	0/1:11,3:14:84.73:85,0,100	0/0:4,0:4:9.70:0,10,98	0/0:11,0:11:29.67:0,30,302	0/1:9,1:10:20.46:43,0,20	1/1:7,0:7:12.21:54,12,0	0/0:15,0:15:41.93:0,42,548	0/0:15,0:16:44.93:0,45,640	0/0:19,0:19:56.97:0,57,771	0/0:19,0:19:56.97:0,57,769	0/0:10,0:10:19.41:0,19,165	0/0:23,0:23:48.81:0,49,783	0/0:19,0:19:36.42:0,36,673	0/0:7,0:7:18.48:0,18,216	0/1:5,0:6:26.92:27,0,33	0/0:15,0:15:5.09:0,5,77	0/1:9,0:9:16.03:16,0,73	0/0:10,0:10:27.03:0,27,324	0/0:20,0:20:57.08:0,57,798	0/0:20,0:20:58.77:0,59,741	0/0:23,0:23:59.45:0,59,853
chr10	74245410	.	CAA	C	651.71	PASS	AB=0.576;AC=10;AF=0.179;AN=56;BaseQRankSum=3.223;DP=502;FS=6.380;HRun=16;HaplotypeScore=77.1328;InbreedingCoeff=0.7104;MQ=73.51;MQ0=10;MQRankSum=-0.219;QD=10.68;ReadPosRankSum=2.740;VQSLOD=2.5992;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:65.51:0,66,780	0/0:5,0:6:17.42:0,17,205	0/0:52,0:17:23.15:0,23,210	0/0:47,0:22:28.64:0,29,265	0/0:13,0:17:32.40:0,32,332	0/0:11,1:17:34.20:0,34,365	0/0:11,0:12:26.44:0,26,311	0/0:18,0:17:37.70:0,38,330	0/1:5,6:13:6.90:190,0,7	0/0:10,0:10:25.89:0,26,291	0/0:16,0:23:44.96:0,45,445	1/1:2,8:10:17.96:149,18,0	0/1:1,6:8:25.01:104,0,25	0/0:15,0:15:39.06:0,39,443	0/0:15,0:16:38.47:0,38,453	0/0:16,0:19:44.45:0,44,496	0/0:17,0:19:50.38:0,50,541	0/0:9,0:9:8.98:0,9,73	0/0:19,0:23:45.38:0,45,455	0/0:15,0:19:40.70:0,41,471	0/0:6,0:7:11.87:0,12,127	1/1:2,3:6:5.68:79,6,0	1/1:4,10:15:26.62:212,27,0	1/1:4,5:9:8.82:75,9,0	0/0:7,0:18:24.05:0,24,259	0/0:21,0:22:44.46:0,44,513	0/0:17,0:20:53.96:0,54,619	0/0:20,1:25:22.99:0,23,477
chr10	74245423	.	A	ACAAAAC	1625.98	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-1.619;DP=511;FS=0.000;HRun=0;HaplotypeScore=127.2978;InbreedingCoeff=0.5108;MQ=75.25;MQ0=10;MQRankSum=-2.481;QD=18.91;ReadPosRankSum=-1.796;VQSLOD=2.9144;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.15:0,69,1426	0/0:6,0:6:18.06:0,18,401	0/0:53,0:18:36.64:0,37,522	0/0:45,0:21:9.86:0,10,439	0/0:20,0:20:60.12:0,60,1023	0/0:19,0:19:48.09:0,48,936	0/0:13,0:13:33.10:0,33,675	1/1:7,10:25:46.37:1357,46,0	0/0:16,0:16:45.15:0,45,780	0/1:10,0:10:1.09:1,0,272	0/1:20,0:20:30.51:31,0,453	0/0:10,0:10:21.07:0,21,376	0/0:8,0:8:21.07:0,21,377	0/0:16,0:16:46.68:0,47,886	0/0:17,0:17:51.14:0,51,1014	0/0:16,0:16:48.12:0,48,927	0/0:23,0:23:68.86:0,69,1030	1/1:1,6:12:9.03:257,9,0	0/0:19,0:19:39.40:0,39,881	0/0:22,0:22:63.15:0,63,1160	0/0:6,0:6:15.52:0,16,316	0/0:8,0:8:24.07:0,24,391	0/0:16,0:16:42.12:0,42,674	0/0:6,0:6:14.41:0,14,219	0/1:18,0:18:99:112,0,159	0/0:20,0:20:57.13:0,57,1114	0/0:22,0:22:63.62:0,64,1070	0/0:21,0:21:57.14:0,57,1013
chr10	74246225	.	AT	A	2137.51	PASS	AB=0.907;AC=18;AF=0.321;AN=56;BaseQRankSum=13.127;DP=575;FS=2.103;HRun=11;HaplotypeScore=66.3046;InbreedingCoeff=0.8208;MQ=72.10;MQ0=0;MQRankSum=1.601;QD=11.19;ReadPosRankSum=0.064;VQSLOD=3.1719;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:33:61.68:0,62,877	0/0:12,1:13:11.45:0,11,327	0/0:14,0:12:15.91:0,16,118	0/1:13,1:12:25.38:25,0,70	0/0:25,0:25:60.61:0,61,634	0/0:33,0:32:90.21:0,90,949	0/0:17,1:18:26.49:0,26,487	1/1:6,0:33:54.93:162,55,0	1/1:2,12:14:32.96:271,33,0	0/0:27,0:27:54.05:0,54,546	0/0:28,0:28:72.16:0,72,754	1/1:1,17:18:50.94:419,51,0	1/1:2,13:15:32.96:271,33,0	0/0:14,0:14:33.08:0,33,352	0/0:24,0:24:41.51:0,42,606	0/0:15,0:15:39.10:0,39,416	0/0:22,0:22:57.13:0,57,601	1/1:4,0:20:30.54:88,31,0	0/0:27,0:29:65.62:0,66,625	0/0:15,1:16:20.47:0,20,423	0/0:11,1:13:8.27:0,8,278	1/1:2,19:21:53.92:443,54,0	1/1:1,21:24:58:455,58,0	1/1:0,10:10:23.97:197,24,0	0/0:21,0:22:50.95:0,51,519	0/0:26,2:28:25.88:0,26,677	0/1:19,3:22:13.80:14,0,471	0/0:9,0:9:27.07:0,27,288
chr10	74248287	.	T	TC	4828.28	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-6.045;DP=445;FS=2.403;HRun=4;HaplotypeScore=55.1724;InbreedingCoeff=0.9868;MQ=76.23;MQ0=0;MQRankSum=-2.257;QD=29.80;ReadPosRankSum=0.358;VQSLOD=4.8913;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,18:24:51.15:675,51,0	0/0:4,0:4:9:0,9,89	0/0:11,0:10:30.02:0,30,306	0/0:13,0:13:32.05:0,32,316	0/0:9,0:9:21.05:0,21,229	0/0:19,0:19:45.13:0,45,510	0/0:18,0:18:54.14:0,54,603	1/1:11,18:29:57.18:765,57,0	1/1:2,16:18:42.14:564,42,0	0/0:15,0:15:30.08:0,30,340	0/0:9,0:9:21.04:0,21,225	1/1:2,13:15:33.11:450,33,0	1/1:4,16:21:32.94:451,33,0	0/0:11,0:11:24.07:0,24,269	0/0:12,0:12:27.07:0,27,306	0/0:12,0:12:36.10:0,36,408	0/0:23,0:22:63.18:0,63,711	1/1:3,13:16:36.09:473,36,0	0/0:23,0:23:57.12:0,57,632	0/0:6,0:6:18.03:0,18,190	0/0:22,0:22:54.15:0,54,612	1/1:0,12:12:36.12:492,36,0	1/1:1,7:8:21.07:277,21,0	1/1:2,17:19:51.16:681,51,0	0/0:16,0:16:39.09:0,39,427	0/0:19,0:19:48.13:0,48,537	0/0:28,0:26:78.22:0,78,883	0/0:12,0:12:36.10:0,36,408
chr10	74250471	.	GAA	G	994.86	PASS	AB=0.809;AC=6;AF=0.107;AN=56;BaseQRankSum=-3.578;DP=641;FS=3.250;HRun=16;HaplotypeScore=103.5564;InbreedingCoeff=0.6442;MQ=68.57;MQ0=15;MQRankSum=1.242;QD=7.59;ReadPosRankSum=1.435;VQSLOD=1.3777;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,17:25:31.57:297,32,0	0/0:8,0:8:20.41:0,20,218	0/0:67,0:14:17.11:0,17,163	0/1:43,0:15:6.55:7,0,94	0/0:29,0:31:69.13:0,69,791	0/0:16,1:24:32.61:0,33,524	0/0:7,0:10:23.41:0,23,245	0/1:13,16:30:8.67:276,0,9	0/0:14,0:14:32.96:0,33,277	0/0:29,0:29:74.64:0,75,565	0/0:25,0:25:53.74:0,54,418	0/0:17,0:17:35.96:0,36,300	0/0:16,0:16:8.53:0,9,206	0/0:14,0:16:38.41:0,38,423	0/0:16,0:17:30.07:0,30,366	0/0:13,0:17:43.96:0,44,480	0/0:17,0:19:48.15:0,48,613	1/1:3,25:30:68.24:548,68,0	0/0:16,0:20:53.51:0,54,634	0/0:27,1:33:58.96:0,59,858	0/0:4,0:6:14.40:0,14,149	0/0:18,0:21:50.98:0,51,439	0/0:23,0:24:56.95:0,57,480	0/0:16,0:18:35.97:0,36,306	0/0:31,0:30:75.64:0,76,604	0/0:21,0:24:62.46:0,62,673	0/0:11,0:12:29.45:0,29,351	0/0:9,0:11:11.45:0,11,210
chr10	74250476	.	A	AC	47.95	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=10.365;DP=655;FS=18.555;HRun=0;HaplotypeScore=101.3683;InbreedingCoeff=0.5516;MQ=68.89;MQ0=15;MQRankSum=-1.491;QD=0.56;ReadPosRankSum=3.897;VQSLOD=0.3899;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:59.93:0,60,506	0/0:8,0:8:22.29:0,22,249	0/0:70,0:15:8.63:0,9,129	0/0:48,0:15:11.78:0,12,131	0/0:34,0:34:92.32:0,92,928	0/0:24,0:24:63.06:0,63,613	0/0:10,0:10:23.83:0,24,237	0/0:30,0:30:89.15:0,89,779	0/0:14,0:14:35.71:0,36,260	1/1:28,0:28:1.03:42,1,0	0/1:26,0:26:48.92:49,0,85	0/0:16,0:16:38.65:0,39,283	0/0:14,0:14:32.58:0,33,232	0/0:16,0:16:42.86:0,43,473	0/0:14,0:14:40.63:0,41,454	0/0:20,0:20:55.38:0,55,568	0/0:19,0:19:52.01:0,52,643	0/0:30,0:30:71.91:0,72,605	0/0:22,0:22:60.01:0,60,682	0/0:33,0:33:89.65:0,90,978	0/0:7,0:7:19.26:0,19,201	0/0:22,0:22:65.14:0,65,462	0/0:23,0:23:57.40:0,57,408	0/0:20,0:20:47.66:0,48,354	1/1:27,5:31:5.40:63,5,0	0/0:26,0:26:60.15:0,60,601	0/0:14,0:14:39.05:0,39,453	0/0:11,0:11:30.87:0,31,299
chr10	74250477	.	A	AC	1624.84	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.342;DP=657;FS=11.515;HRun=0;HaplotypeScore=95.0261;InbreedingCoeff=0.9440;MQ=70.88;MQ0=15;MQRankSum=-1.789;QD=18.05;ReadPosRankSum=2.939;VQSLOD=5.5127;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:59.91:0,60,495	0/0:8,0:8:22.29:0,22,250	0/0:73,0:18:15.61:0,16,169	0/0:48,0:15:4.73:0,5,130	0/0:33,0:33:89.12:0,89,915	0/0:24,0:24:63.37:0,63,612	0/0:10,0:10:23.47:0,23,237	0/0:29,0:29:86.87:0,87,752	0/0:14,0:14:35.58:0,36,260	1/1:6,24:30:79.56:665,80,0	1/1:3,23:27:64.50:477,64,0	0/0:16,0:16:38.67:0,39,287	0/0:14,0:14:32.76:0,33,249	0/0:16,0:16:42.89:0,43,477	0/0:13,0:13:37.31:0,37,425	0/0:20,0:20:55.41:0,55,573	0/0:20,0:20:52.38:0,52,648	0/0:29,0:29:71.91:0,72,590	0/0:21,0:21:56.46:0,56,666	0/0:33,0:33:89.73:0,90,979	0/0:6,0:6:16.28:0,16,180	0/0:22,0:22:65.03:0,65,471	0/0:23,0:23:57.61:0,58,425	0/0:20,0:20:47.71:0,48,363	1/1:8,25:32:83.04:625,83,0	0/0:26,0:26:63.40:0,63,625	0/0:14,0:14:40.27:0,40,454	0/0:11,0:11:30.88:0,31,300
chr10	74250483	.	A	AAC	6005.11	PASS	AB=0.563;AC=17;AF=0.304;AN=56;BaseQRankSum=-2.398;DP=663;FS=2.476;HRun=0;HaplotypeScore=91.5230;InbreedingCoeff=0.9163;MQ=73.67;MQ0=13;MQRankSum=-1.970;QD=30.03;ReadPosRankSum=5.410;VQSLOD=6.4814;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:35.75:0,36,431	0/0:9,0:9:26.97:0,27,281	0/0:71,0:20:20.32:0,20,239	0/0:48,0:16:24.99:0,25,204	0/0:35,0:35:99:0,102,997	0/0:24,0:24:68.70:0,69,653	0/0:10,0:10:26.88:0,27,256	0/0:27,0:27:74.85:0,75,630	1/1:0,13:14:32.94:460,33,0	1/1:7,1:32:83.75:1076,84,0	1/1:12,0:24:62.82:738,63,0	1/1:0,15:16:35.95:510,36,0	1/1:2,14:18:7.66:355,8,0	0/0:15,0:15:35.31:0,35,423	0/0:12,0:12:35.99:0,36,398	0/0:21,1:22:17.04:0,17,553	0/0:21,0:21:57.05:0,57,668	0/0:32,0:32:83.83:0,84,670	0/0:22,0:22:65.87:0,66,704	0/0:32,0:32:74.87:0,75,921	0/0:7,0:7:20.95:0,21,213	1/1:4,16:22:54.43:678,54,0	1/1:4,16:24:30.69:677,31,0	0/1:4,12:18:5.54:399,0,6	1/1:7,0:31:84.24:1114,84,0	0/0:26,0:26:72.51:0,73,692	0/0:15,0:15:42:0,42,460	0/0:9,0:9:16.80:0,17,221
chr10	74251195	.	T	TCACA	677.82	PASS	AB=0.865;AC=14;AF=0.269;AN=52;BaseQRankSum=1.075;DP=576;FS=0.834;HRun=0;HaplotypeScore=100.8696;InbreedingCoeff=0.4629;MQ=60.56;MQ0=18;MQRankSum=0.008;QD=4.32;ReadPosRankSum=-2.143;VQSLOD=1.2449;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:3.47:0,3,29	0/0:10,0:10:9.27:0,9,77	./.	./.	0/0:18,0:19:20.40:0,20,229	0/0:17,0:17:14.16:0,14,192	0/1:22,1:23:37.74:38,0,397	1/1:18,0:18:4.37:41,4,0	1/1:12,1:13:6.01:95,6,0	1/1:12,0:12:6.89:70,7,0	0/0:14,0:14:2.86:0,3,25	0/1:11,4:20:11.63:161,0,12	1/1:7,2:16:8.75:162,9,0	0/0:13,0:17:23.97:0,24,283	0/0:13,0:13:11.94:0,12,135	0/0:16,0:19:27.07:0,27,365	0/0:40,0:44:21.86:0,22,539	1/1:13,3:19:17.96:260,18,0	0/0:14,0:14:11.11:0,11,128	0/0:15,0:17:24.05:0,24,315	0/1:23,0:23:0.99:1,0,42	0/1:10,1:12:0.23:0,0,0	0/0:15,0:15:2.72:0,3,23	0/0:24,0:23:14.94:0,15,116	0/0:15,0:15:5.90:0,6,41	0/0:20,0:19:2.35:0,2,308	0/0:19,0:20:17.64:0,18,300	0/0:4,0:5:6.01:0,6,69
chr10	74251216	.	CACACACACACACACACACAT	C	100.28	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-1.484;DP=610;FS=0.000;HRun=0;HaplotypeScore=238.9549;InbreedingCoeff=0.1900;MQ=52.96;MQ0=21;MQRankSum=1.587;QD=1.15;ReadPosRankSum=-4.327;VQSLOD=1.5884;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,18:33:3.01:165,3,0	0/0:12,0:12:33.11:0,33,2512	0/0:41,0:11:27.09:0,27,1020	0/0:43,0:9:18.95:0,19,871	0/0:21,0:20:54.19:0,54,3407	0/0:20,0:19:44.47:0,44,2656	0/0:27,0:26:64.76:0,65,4079	0/1:23,0:22:22.36:22,0,1609	0/0:11,0:11:3.10:0,3,1065	0/0:26,0:26:22.15:0,22,2767	0/0:16,0:15:9.50:0,10,489	0/0:19,0:19:12.15:0,12,2018	0/1:14,0:13:5.41:5,0,762	0/0:19,0:19:39.08:0,39,2975	0/0:15,0:15:32.86:0,33,1918	0/0:17,0:17:45.15:0,45,3337	0/0:41,0:41:98.02:0,98,6965	0/1:17,0:17:9.90:10,0,1846	0/0:20,0:18:54.17:0,54,2433	0/0:19,0:19:42.08:0,42,3042	0/0:25,0:25:45.14:0,45,2350	0/0:16,0:15:17.97:0,18,532	0/0:16,0:16:6.41:0,6,377	0/0:23,0:22:27.09:0,27,1400	0/0:20,0:20:21.51:0,22,723	0/0:27,0:26:75.24:0,75,4546	0/0:16,0:16:45.15:0,45,3174	0/0:12,0:12:33.05:0,33,1354
chr10	74251232	.	CACAT	C	1684.89	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=-0.391;DP=527;FS=7.954;HRun=0;HaplotypeScore=87.2205;InbreedingCoeff=0.3899;MQ=56.15;MQ0=10;MQRankSum=0.262;QD=6.66;ReadPosRankSum=-3.862;VQSLOD=-0.2219;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:3.01:33,3,0	0/0:12,0:12:33.28:0,33,447	0/0:20,0:11:29.96:0,30,283	0/0:23,0:9:26.94:0,27,253	0/0:20,0:19:47.87:0,48,639	0/0:22,0:21:55.63:0,56,733	0/0:24,0:23:60.54:0,61,1024	1/1:24,0:23:3.75:407,4,0	0/1:6,0:6:56.97:57,0,59	1/1:23,1:24:63.87:595,64,0	1/1:4,11:14:2.67:57,3,0	0/1:17,0:17:45.92:46,0,115	0/1:20,0:19:53.78:159,0,54	0/0:17,0:17:39.02:0,39,655	0/0:14,0:14:32.64:0,33,475	0/0:18,0:18:44.73:0,45,738	0/0:36,0:36:52.28:0,52,1274	0/1:17,0:17:99:143,0,142	0/0:21,0:19:46.36:0,46,461	0/0:15,0:15:36.04:0,36,632	0/0:20,0:20:31.90:0,32,432	1/1:17,0:16:22.48:197,22,0	1/1:16,0:16:0.01:1,0,0	1/1:17,0:16:2.36:7,2,0	1/1:3,16:19:5.69:113,6,0	0/1:28,0:28:40.30:40,0,727	0/1:15,0:15:5.87:6,0,505	0/0:12,0:12:32.89:0,33,287
chr10	74251234	.	CAT	C	2109.62	PASS	AB=0.990;AC=25;AF=0.446;AN=56;BaseQRankSum=2.159;DP=513;FS=22.555;HRun=0;HaplotypeScore=68.8978;InbreedingCoeff=0.6801;MQ=56.66;MQ0=9;MQRankSum=-1.948;QD=7.84;ReadPosRankSum=-2.383;VQSLOD=1.2433;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:2.96:19,3,0	0/0:12,0:12:12.74:0,13,290	0/0:17,0:11:29.96:0,30,283	0/0:20,0:10:29.95:0,30,283	0/0:19,0:18:13.61:0,14,405	0/0:22,0:21:42.63:0,43,558	0/0:23,0:22:60.04:0,60,743	1/1:25,0:24:51.50:502,52,0	0/1:6,0:6:5.51:75,0,6	1/1:23,0:23:68.97:614,69,0	1/1:15,0:14:2.82:24,3,0	1/1:14,1:15:14.39:137,14,0	1/1:20,0:19:19.21:183,19,0	0/0:17,0:17:10.10:0,10,357	0/0:14,0:14:32.64:0,33,374	0/0:16,0:16:15.07:0,15,468	0/1:32,0:33:6.34:6,0,727	1/1:17,0:17:7.51:161,8,0	0/0:21,0:19:50.60:0,51,431	0/0:14,0:14:10.03:0,10,367	0/0:21,0:21:37.79:0,38,368	1/1:17,0:16:22.49:197,22,0	1/1:3,13:16:2.75:46,3,0	1/1:3,14:16:15.05:229,15,0	1/1:18,1:19:5.67:48,6,0	0/1:28,0:28:69.59:70,0,563	0/0:15,0:15:24.74:0,25,362	0/0:12,0:12:19.60:0,20,224
chr10	74251657	.	TG	T	1765.24	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.642;DP=664;FS=8.130;HRun=4;HaplotypeScore=65.9588;InbreedingCoeff=0.9994;MQ=81.63;MQ0=0;MQRankSum=-2.548;QD=31.52;ReadPosRankSum=1.810;VQSLOD=4.0388;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.30:0,96,1310	0/0:9,0:9:27.09:0,27,378	0/0:16,0:16:45.15:0,45,630	0/0:22,0:22:33.13:0,33,605	0/0:20,0:20:60.18:0,60,807	0/0:17,0:17:48.16:0,48,672	0/0:28,0:28:84.28:0,84,1176	0/0:40,0:40:99:0,114,1564	0/0:20,0:20:60.20:0,60,834	1/1:0,24:24:72.22:864,72,0	1/1:0,14:14:39.12:468,39,0	0/0:23,0:23:69.23:0,69,961	0/0:25,0:25:75.25:0,75,1050	0/0:25,0:25:72.24:0,72,1002	0/0:20,0:20:57.19:0,57,798	0/0:25,0:25:72.24:0,72,1008	0/0:47,0:47:99:0,141,1924	0/0:25,0:25:72.24:0,72,1008	0/0:14,0:14:39.13:0,39,544	0/0:20,0:20:60.20:0,60,838	0/0:40,0:40:99:0,117,1636	0/0:22,0:22:60.19:0,60,823	0/0:11,0:11:33.11:0,33,462	0/0:42,0:42:99:0,123,1722	1/1:1,17:18:48.15:576,48,0	0/0:20,0:20:60.19:0,60,823	0/0:28,0:28:84.28:0,84,1164	0/0:14,0:14:42.14:0,42,588
chr10	74252195	.	AT	A	1784.44	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.895;DP=680;FS=4.233;HRun=2;HaplotypeScore=66.1376;InbreedingCoeff=0.9996;MQ=91.95;MQ0=0;MQRankSum=-1.301;QD=34.99;ReadPosRankSum=-3.035;VQSLOD=2.8558;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,168,2393	0/0:11,0:11:33.11:0,33,495	0/0:23,0:23:66.22:0,66,961	0/0:32,0:32:70.08:0,70,1188	0/0:21,0:21:60.20:0,60,898	0/0:20,0:19:60.20:0,60,898	0/0:20,0:20:60.18:0,60,877	1/1:1,31:32:93.30:1207,93,0	0/0:23,0:23:63.21:0,63,944	0/0:27,0:27:81.24:0,81,1159	0/0:18,0:18:48.16:0,48,719	0/0:23,0:23:69.23:0,69,1033	0/0:18,0:18:51.17:0,51,764	0/0:22,0:22:63.21:0,63,944	0/0:21,0:21:60.20:0,60,899	0/0:21,0:21:63.21:0,63,944	0/0:34,0:34:99:0,99,1461	1/1:0,19:19:54.18:699,54,0	0/0:23,0:23:69.23:0,69,1034	0/0:28,0:28:84.28:0,84,1259	0/0:31,0:31:90.28:0,90,1326	0/0:23,0:23:66.22:0,66,988	0/0:22,0:22:63.20:0,63,924	0/0:30,0:30:90.22:0,90,1282	0/0:18,0:18:54.17:0,54,791	0/0:25,0:25:69.23:0,69,1034	0/0:28,0:28:84.28:0,84,1257	0/0:10,0:10:30.10:0,30,450
chr10	74252676	.	TA	T	406.64	PASS	AB=0.882;AC=8;AF=0.143;AN=56;BaseQRankSum=2.875;DP=374;FS=0.657;HRun=13;HaplotypeScore=55.4708;InbreedingCoeff=0.4073;MQ=74.35;MQ0=0;MQRankSum=-1.182;QD=4.78;ReadPosRankSum=-1.056;VQSLOD=1.0674;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:28.91:0,29,157	0/0:4,0:4:9.01:0,9,88	0/0:19,1:12:14.28:0,14,118	0/0:12,0:8:5.50:0,6,38	0/0:20,0:22:30.96:0,31,363	0/1:9,2:12:10.93:11,0,215	0/0:16,0:16:21.03:0,21,204	1/1:4,14:18:31.47:269,31,0	0/0:9,0:9:19.87:0,20,106	0/0:7,0:7:11.36:0,11,56	0/0:14,0:14:33.72:0,34,166	0/0:10,0:10:25.46:0,25,135	0/0:15,0:15:8.95:0,9,104	0/0:11,0:11:24.04:0,24,233	0/1:12,2:14:16.78:17,0,173	0/1:8,1:9:0.88:1,0,154	0/1:15,2:17:4.83:5,0,262	1/1:2,13:15:32.81:240,33,0	0/0:11,0:11:15.02:0,15,146	0/0:12,2:14:8.14:0,8,241	0/0:9,0:9:21.03:0,21,204	0/0:11,0:11:22.22:0,22,104	0/0:17,0:17:17.56:0,18,171	0/0:13,0:13:28.38:0,28,148	0/0:9,0:9:8.52:0,9,43	0/0:11,0:11:27.04:0,27,259	0/0:29,2:31:34.09:0,34,621	0/0:9,0:9:23.94:0,24,203
chr10	74252689	.	A	AAG	955.08	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-2.201;DP=367;FS=15.790;HRun=0;HaplotypeScore=60.2089;InbreedingCoeff=0.8027;MQ=67.53;MQ0=0;MQRankSum=1.653;QD=18.73;ReadPosRankSum=-2.369;VQSLOD=1.5097;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:11.14:63,0,11	0/0:5,0:5:15.02:0,15,165	0/0:10,0:6:15.88:0,16,129	0/0:8,0:5:11.66:0,12,89	0/0:21,0:21:37.23:0,37,496	0/0:16,0:16:44.86:0,45,472	0/0:13,0:13:36.02:0,36,390	0/0:24,0:24:36.26:0,36,175	0/0:9,0:9:18.01:0,18,165	1/1:1,9:10:26.97:321,27,0	1/1:0,13:17:47.69:564,48,0	0/0:9,0:9:27.01:0,27,247	0/0:11,0:11:25.55:0,26,219	0/0:10,0:10:27.07:0,27,335	0/0:13,0:13:39.01:0,39,405	0/0:9,0:9:27.03:0,27,303	0/0:16,0:16:48.02:0,48,537	0/0:15,0:15:30.78:0,31,142	0/0:10,0:10:30.04:0,30,322	0/0:18,0:18:50.99:0,51,537	0/0:11,0:11:30.03:0,30,340	0/0:9,0:9:21.01:0,21,193	0/0:17,0:18:35.49:0,35,307	0/0:14,0:14:27.01:0,27,248	1/1:1,6:10:9.03:151,9,0	0/0:12,0:12:33.08:0,33,404	0/0:28,0:29:86.83:0,87,983	0/0:5,0:5:15.05:0,15,193
chr10	74253239	.	AC	A	648.54	PASS	AB=0.576;AC=5;AF=0.089;AN=56;BaseQRankSum=11.238;DP=583;FS=1.188;HRun=1;HaplotypeScore=78.3418;InbreedingCoeff=0.1991;MQ=78.10;MQ0=0;MQRankSum=-5.854;QD=9.26;ReadPosRankSum=3.251;VQSLOD=1.4764;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,19:29:99:250,0,104	0/0:5,0:5:15.05:0,15,240	0/0:23,0:23:69.23:0,69,1049	0/0:19,0:19:56.35:0,56,779	0/0:19,0:19:51.16:0,51,772	0/0:24,0:24:69.20:0,69,1055	0/0:27,0:27:81.25:0,81,1242	0/0:29,0:29:87.25:0,87,1299	0/0:25,0:25:72.25:0,72,1138	0/1:3,16:22:27.55:295,0,28	1/1:1,8:9:1.96:105,2,0	0/0:24,0:24:69.23:0,69,1086	0/0:28,0:28:84.29:0,84,1302	0/0:23,0:23:69.22:0,69,1068	0/0:26,0:26:78.27:0,78,1239	0/0:18,0:18:54.18:0,54,863	0/0:23,0:23:69.23:0,69,1090	0/0:26,0:26:75.26:0,75,1186	0/0:19,0:19:57.19:0,57,904	0/0:14,0:14:42.13:0,42,626	0/0:29,0:29:84.25:0,84,1288	0/0:22,0:22:66.17:0,66,1010	0/0:14,0:14:42.09:0,42,578	0/0:18,0:18:54.18:0,54,858	0/1:3,7:9:21.20:110,0,21	0/0:26,0:26:78.24:0,78,1181	0/0:26,0:25:78.24:0,78,1199	0/0:6,0:6:18.06:0,18,288
chr10	74253241	.	AAG	A	934.25	PASS	AB=0.603;AC=5;AF=0.089;AN=56;BaseQRankSum=11.384;DP=578;FS=0.556;HRun=0;HaplotypeScore=88.1368;InbreedingCoeff=0.4910;MQ=77.44;MQ0=0;MQRankSum=-2.340;QD=12.98;ReadPosRankSum=2.590;VQSLOD=3.3449;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,19:29:73.64:360,0,74	0/0:5,0:5:15.05:0,15,293	0/0:22,0:22:66.21:0,66,1250	0/0:18,0:18:46.93:0,47,953	0/0:19,0:19:51.13:0,51,961	0/0:23,0:23:66.23:0,66,1314	0/0:25,0:25:75.26:0,75,1511	0/0:28,0:28:81.28:0,81,1637	0/0:25,0:25:72.25:0,72,1461	0/1:7,15:22:0.50:371,0,0	1/1:2,8:10:7.90:161,8,0	0/0:24,0:24:69.24:0,69,1397	0/0:28,0:28:84.27:0,84,1647	0/0:24,0:24:72.25:0,72,1445	0/0:28,0:28:84.29:0,84,1680	0/0:19,0:19:57.20:0,57,1148	0/0:23,0:23:69.21:0,69,1317	0/0:26,0:26:78.27:0,78,1561	0/0:19,0:19:57.18:0,57,1122	0/0:13,0:13:39.13:0,39,784	0/0:27,0:27:78.27:0,78,1571	0/0:22,0:22:63.22:0,63,1256	0/0:11,0:11:33.11:0,33,666	0/0:19,0:19:57.20:0,57,1126	0/1:4,7:10:6.88:159,0,7	0/0:26,0:26:78.27:0,78,1548	0/0:26,0:25:78.27:0,78,1569	0/0:6,0:6:18.06:0,18,366
chr10	74253523	.	TG	T	435.26	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=4.129;DP=223;FS=4.284;HRun=6;HaplotypeScore=24.8116;InbreedingCoeff=0.7077;MQ=40.12;MQ0=26;MQRankSum=-2.505;QD=13.60;ReadPosRankSum=2.138;VQSLOD=1.3646;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,11:12:21.05:225,21,0	0/0:2,0:2:6.02:0,6,79	./.	./.	0/0:3,0:3:3.01:0,3,39	0/0:6,0:6:12.04:0,12,158	0/0:10,0:9:18.05:0,18,223	0/0:19,0:15:30.10:0,30,380	0/0:8,0:8:24.03:0,24,281	1/1:1,5:5:9.02:97,9,0	1/1:0,4:4:12.03:129,12,0	0/0:10,0:9:23.99:0,24,272	0/0:3,0:3:9.03:0,9,115	0/0:8,0:8:12.04:0,12,158	0/0:6,0:5:9.02:0,9,103	0/0:9,0:9:24.07:0,24,303	0/0:11,0:10:21:0,21,239	0/0:7,0:6:9.02:0,9,106	0/0:6,0:5:15.05:0,15,197	0/0:2,0:2:3.01:0,3,39	0/0:21,0:18:39.10:0,39,483	0/0:12,0:10:21.07:0,21,272	0/0:4,0:4:9.03:0,9,114	0/0:4,0:3:6.02:0,6,79	1/1:1,6:6:12.03:129,12,0	0/0:10,0:9:24.08:0,24,312	0/0:6,0:6:12.04:0,12,157	0/0:1,0:1:3:0,3,25
chr10	74253644	.	TAAGA	T	1245.50	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=4.712;DP=327;FS=15.068;HRun=0;HaplotypeScore=67.9777;InbreedingCoeff=0.9291;MQ=48.82;MQ0=30;MQRankSum=-6.668;QD=42.95;ReadPosRankSum=-1.581;VQSLOD=2.2157;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:60.17:0,60,1455	0/0:11,0:11:33.11:0,33,872	./.	./.	0/0:9,0:9:24.08:0,24,610	0/0:9,0:9:24.08:0,24,658	0/0:8,0:8:21.07:0,21,530	1/1:3,20:21:57.18:1072,57,0	0/0:4,0:4:12.04:0,12,328	0/0:22,0:21:60.68:0,61,1612	0/0:12,0:12:33.11:0,33,826	0/0:9,0:9:21.07:0,21,574	0/0:7,0:6:18.06:0,18,467	0/0:6,0:6:18.05:0,18,435	0/0:9,0:8:24.08:0,24,616	0/0:11,0:11:30.10:0,30,753	0/0:16,0:17:48.16:0,48,1306	1/1:1,5:5:15.05:291,15,0	0/0:15,0:14:42.14:0,42,1078	0/0:10,0:10:30.10:0,30,806	0/0:9,0:9:24.08:0,24,647	0/0:7,0:6:15.05:0,15,382	0/0:14,0:13:30.10:0,30,773	0/0:5,0:6:12.04:0,12,327	0/0:14,0:14:39.12:0,39,1010	0/0:14,0:14:42.14:0,42,1150	0/0:18,0:18:54.17:0,54,1421	0/0:5,0:5:15.05:0,15,411
chr10	74253674	.	AAAAAAAG	A	3567.49	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=9.733;DP=347;FS=30.688;HRun=0;HaplotypeScore=81.4780;InbreedingCoeff=0.9344;MQ=52.05;MQ0=5;MQRankSum=-10.401;QD=45.74;ReadPosRankSum=0.489;VQSLOD=1.6876;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:51.16:0,51,1863	0/0:13,0:13:39.13:0,39,1377	0/0:7,0:1:3.01:0,3,88	0/0:8,0:7:21.07:0,21,713	0/0:17,0:17:45.15:0,45,1617	0/0:10,0:10:27.09:0,27,998	0/0:7,0:7:21.07:0,21,778	1/1:8,13:18:36.12:873,36,0	1/1:0,5:5:15.05:364,15,0	0/0:24,0:24:66.22:0,66,2314	0/0:12,0:12:33.11:0,33,1189	1/1:1,6:7:18.06:437,18,0	1/1:1,7:7:18.06:436,18,0	0/0:6,0:6:18.06:0,18,675	0/0:13,0:12:36.12:0,36,1351	0/0:11,0:11:33.11:0,33,1225	0/0:18,0:18:54.16:0,54,1935	1/1:4,5:8:15.04:316,15,0	0/0:14,0:13:36.12:0,36,1276	0/0:16,0:16:48.16:0,48,1751	0/0:12,0:12:36.12:0,36,1348	1/1:1,6:6:11.97:290,12,0	1/1:2,12:13:30.10:706,30,0	1/1:2,5:7:6.02:145,6,0	0/0:16,0:16:45.15:0,45,1675	0/0:16,0:16:42.14:0,42,1560	0/0:17,0:17:51.16:0,51,1825	0/0:5,0:5:15.05:0,15,526
chr10	74254288	.	G	GTATTT	3721.33	PASS	AB=0.969;AC=14;AF=0.250;AN=56;BaseQRankSum=-4.509;DP=446;FS=1.348;HRun=0;HaplotypeScore=101.2573;InbreedingCoeff=0.6438;MQ=68.18;MQ0=4;MQRankSum=-1.157;QD=20.67;ReadPosRankSum=-2.266;VQSLOD=3.0930;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,13:29:36.12:979,36,0	0/0:6,0:6:3.01:0,3,56	0/0:20,0:11:3.47:0,3,27	0/1:32,0:20:21.09:21,0,54	0/0:11,0:11:27.08:0,27,451	0/0:15,0:14:30.10:0,30,556	0/0:17,0:17:26.99:0,27,398	1/1:30,0:28:24.02:364,24,0	0/0:8,0:14:15.04:0,15,175	1/1:6,8:18:30.55:775,31,0	1/1:7,9:19:29.99:697,30,0	0/0:3,0:10:18.05:0,18,210	0/0:6,0:13:18.05:0,18,210	0/0:8,0:8:6.02:0,6,111	0/0:7,0:7:9.03:0,9,167	0/0:7,0:7:12.04:0,12,222	0/0:29,0:28:60.09:0,60,978	1/1:15,0:14:3.01:66,3,0	0/0:12,0:12:12.02:0,12,159	0/0:12,0:12:21.07:0,21,389	0/0:9,0:9:14.92:0,15,173	0/0:9,0:15:6.02:0,6,70	0/0:4,0:15:18.05:0,18,210	0/0:7,0:24:39.12:0,39,454	1/1:8,12:22:27.09:759,27,0	0/1:14,1:15:60.99:61,0,365	0/0:11,0:11:15.03:0,15,246	0/0:11,0:11:6.02:0,6,92
chr10	74254454	.	GA	G	1284.41	PASS	AC=26;AF=1.000;AN=26;DP=83;FS=0.000;HRun=8;HaplotypeScore=24.1942;InbreedingCoeff=-0.0643;MQ=37.93;MQ0=1;QD=17.13;VQSLOD=2.1315;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,3:3:6.01:58,6,0	./.	./.	1/1:0,3:3:3:29,3,0	1/1:0,6:6:6.01:58,6,0	1/1:0,7:7:6:56,6,0	./.	./.	./.	./.	./.	./.	1/1:0,3:3:6.01:58,6,0	1/1:0,6:6:9.01:87,9,0	1/1:1,4:5:9.01:87,9,0	1/1:0,7:7:18.03:174,18,0	./.	1/1:2,5:7:12.01:116,12,0	1/1:0,5:5:9.01:87,9,0	./.	./.	./.	./.	./.	1/1:0,9:9:24.04:231,24,0	1/1:0,9:9:18.02:174,18,0	1/1:0,5:5:15.02:145,15,0
chr10	74255762	.	AG	A	1392.42	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.138;DP=710;FS=1.305;HRun=1;HaplotypeScore=68.6543;InbreedingCoeff=0.9434;MQ=70.92;MQ0=0;MQRankSum=-0.176;QD=36.64;ReadPosRankSum=-3.547;VQSLOD=2.6149;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,1979	0/0:8,0:8:24.08:0,24,384	0/0:13,0:12:27:0,27,366	0/0:14,0:13:5.63:0,6,160	0/0:28,0:28:84.29:0,84,1331	0/0:29,0:29:87.30:0,87,1389	0/0:27,0:27:81.26:0,81,1269	1/1:0,19:19:57.15:759,57,0	0/0:33,0:33:96.33:0,96,1531	0/0:46,0:46:99:0,135,2130	0/0:23,0:23:63.21:0,63,1007	0/0:16,0:16:48.16:0,48,767	0/0:30,0:30:87.30:0,87,1383	0/0:19,0:19:57.18:0,57,885	0/0:30,0:30:90.31:0,90,1436	0/0:22,0:22:66.23:0,66,1053	0/0:31,0:31:93.29:0,93,1461	1/1:0,19:19:54.18:755,54,0	0/0:33,0:33:99:0,99,1533	0/0:23,0:23:69.22:0,69,1077	0/0:37,0:37:99:0,108,1695	0/0:33,0:33:96.33:0,96,1535	0/0:18,0:18:54.18:0,54,863	0/0:28,0:28:84.27:0,84,1313	0/0:16,0:16:48.16:0,48,767	0/0:31,0:31:90.30:0,90,1417	0/0:28,0:28:84.27:0,84,1320	0/0:14,0:14:42.14:0,42,671
chr10	74256682	.	GTCA	G	1919.72	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.746;DP=633;FS=5.657;HRun=0;HaplotypeScore=100.2403;InbreedingCoeff=0.9882;MQ=88.69;MQ0=0;MQRankSum=-3.239;QD=36.22;ReadPosRankSum=1.326;VQSLOD=4.5737;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.32:0,93,2040	0/0:11,0:11:24.08:0,24,544	0/0:25,0:25:60.63:0,61,1341	0/0:24,0:24:69.24:0,69,1430	0/0:16,0:16:48.16:0,48,1088	0/0:17,0:17:51.15:0,51,1093	0/0:34,0:34:99:0,99,2220	0/0:37,0:37:99:0,102,2271	0/0:21,0:21:63.22:0,63,1415	1/1:4,16:20:48.16:793,48,0	1/1:1,14:15:33.11:550,33,0	0/0:14,0:14:39.13:0,39,883	0/0:18,0:18:54.19:0,54,1209	0/0:19,0:19:57.20:0,57,1292	0/0:23,0:23:69.24:0,69,1558	0/0:30,0:30:87.30:0,87,1964	0/0:38,0:38:99:0,114,2523	0/0:25,0:25:75.26:0,75,1696	0/0:22,0:22:57.18:0,57,1234	0/0:25,0:25:72.25:0,72,1628	0/0:38,0:38:99:0,102,2248	0/0:22,0:22:66.23:0,66,1496	0/0:20,0:20:48.16:0,48,1085	0/0:26,0:26:72.25:0,72,1632	1/1:0,18:18:45.11:720,45,0	0/0:15,0:15:39.13:0,39,884	0/0:24,0:24:72.25:0,72,1631	0/0:4,0:4:12.04:0,12,272
chr10	74258119	.	T	TAC	724.22	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.392;DP=858;FS=1.332;HRun=0;HaplotypeScore=144.0589;InbreedingCoeff=0.9237;MQ=71.73;MQ0=6;MQRankSum=-8.717;QD=4.93;ReadPosRankSum=-6.238;VQSLOD=0.7527;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:21,24:44:13.33:147,13,0	0/0:14,0:14:36.12:0,36,462	0/0:46,0:35:62.80:0,63,720	0/0:45,0:33:55.99:0,56,699	0/0:27,0:27:57.19:0,57,733	0/0:22,0:22:60.19:0,60,770	0/0:40,0:40:99:0,105,1325	1/1:40,0:35:34.88:293,35,0	0/0:44,0:44:99:0,105,1330	1/1:30,0:27:32.66:292,33,0	0/0:23,0:23:2.80:0,3,7	0/0:35,0:35:90.29:0,90,1152	0/0:27,0:27:66.16:0,66,796	0/0:34,0:34:87.28:0,87,1106	0/0:33,0:33:81.26:0,81,1037	0/0:24,0:24:57.17:0,57,716	0/0:29,0:29:78.17:0,78,979	1/1:11,0:12:15.51:106,16,0	0/0:24,0:24:60.14:0,60,734	0/0:29,0:29:81.22:0,81,1017	0/0:48,0:48:99:0,129,1620	0/0:38,0:38:99:0,99,1239	0/0:25,0:23:63.20:0,63,807	0/0:37,0:37:96.29:0,96,1211	1/1:16,0:19:6:52,6,0	0/0:34,1:35:27.31:0,27,803	0/0:23,0:23:57.17:0,57,711	0/0:7,0:7:12.04:0,12,154
chr10	74258981	.	CAAAAAAAAAA	C	4901.67	PASS	AB=0.679;AC=14;AF=0.250;AN=56;BaseQRankSum=12.393;DP=549;FS=6.676;HRun=16;HaplotypeScore=215.5915;InbreedingCoeff=0.6033;MQ=59.29;MQ0=9;MQRankSum=-8.727;QD=29.71;ReadPosRankSum=7.012;VQSLOD=0.5460;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:27:57.78:0,58,749	0/0:13,0:13:30.09:0,30,1175	0/0:17,0:10:8.99:0,9,173	0/0:11,0:4:4.80:0,5,22	0/0:19,0:25:66.18:0,66,2417	0/0:23,0:26:72.24:0,72,2716	0/0:15,0:15:36.08:0,36,1539	0/0:23,0:20:42.09:0,42,528	1/1:7,3:10:24.13:511,24,0	0/1:6,0:21:82.19:271,0,82	0/1:11,0:14:42.32:42,0,125	0/1:12,9:21:8.86:836,0,9	1/1:9,6:15:26.15:632,26,0	0/0:14,0:15:42.12:0,42,1406	0/0:15,0:18:48.14:0,48,1920	0/0:17,0:18:43.39:0,43,1824	0/0:21,0:28:60.20:0,60,2205	0/0:23,0:21:56.88:0,57,776	0/0:14,0:14:42.11:0,42,1066	0/0:26,0:33:89.39:0,89,3301	0/0:9,0:9:21.07:0,21,651	1/1:11,12:23:46.99:975,47,0	1/1:3,10:13:37.36:795,37,0	1/1:26,2:28:45.77:479,46,0	0/1:7,0:19:68.98:361,0,69	0/0:20,0:22:54.18:0,54,2072	0/0:27,0:30:72.22:0,72,2318	0/0:9,0:12:36.07:0,36,1068
chr10	74258990	.	A	AC	854.67	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-0.716;DP=552;FS=2.192;HRun=0;HaplotypeScore=138.4130;InbreedingCoeff=0.8056;MQ=51.94;MQ0=13;MQRankSum=-0.808;QD=14.49;ReadPosRankSum=1.153;VQSLOD=5.2585;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:53.52:0,54,456	0/0:14,0:12:34.25:0,34,340	0/1:12,0:5:1.78:2,0,32	0/0:12,0:3:5.78:0,6,31	0/0:27,0:27:67.89:0,68,739	0/0:30,0:30:84.12:0,84,858	0/0:18,0:18:47.97:0,48,506	1/1:9,13:18:38.81:429,39,0	0/0:10,0:10:29.34:0,29,211	0/0:20,0:17:43.43:0,43,263	0/0:11,0:10:27.97:0,28,192	0/0:19,0:19:56.05:0,56,428	0/0:14,0:14:38.87:0,39,279	0/0:19,0:19:47.85:0,48,439	0/0:20,0:20:55.52:0,56,544	0/0:16,0:16:41.42:0,41,420	0/0:28,0:28:67.85:0,68,635	1/1:13,11:22:14.38:543,14,0	0/0:17,0:15:45.47:0,45,456	0/0:35,0:34:97.16:0,97,897	0/0:12,0:12:35.93:0,36,330	0/0:18,0:18:49.96:0,50,358	0/0:14,0:14:38.04:0,38,253	0/0:23,0:23:46.96:0,47,350	0/0:16,0:16:47.41:0,47,332	0/0:32,0:32:83.81:0,84,778	0/0:30,0:29:79.45:0,79,771	0/0:11,0:11:29.47:0,29,277
chr10	74258998	.	CAAAAAAACA	C	5858.26	PASS	AB=0.897;AC=17;AF=0.304;AN=56;BaseQRankSum=14.470;DP=570;FS=3.895;HRun=0;HaplotypeScore=201.8773;InbreedingCoeff=0.7372;MQ=49.07;MQ0=13;MQRankSum=-7.345;QD=30.35;ReadPosRankSum=3.959;VQSLOD=4.0635;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:86.20:86,0,146	0/0:14,0:12:33.11:0,33,1282	0/0:9,0:4:8.52:0,9,174	0/0:10,0:1:0:0,0,0	0/0:30,0:30:81.24:0,81,2292	0/0:30,0:30:81.25:0,81,2536	0/0:22,0:22:63.21:0,63,1765	0/0:22,0:17:35.41:0,35,297	1/1:5,3:8:22.63:517,23,0	1/1:32,0:29:26.05:576,26,0	0/1:13,0:12:6.43:120,0,6	0/1:11,9:20:11.78:925,0,12	1/1:6,6:13:28.56:647,29,0	0/0:18,0:18:48.16:0,48,1397	0/0:23,0:23:63.22:0,63,1982	0/0:19,0:19:51.17:0,51,1706	0/0:27,0:27:62:0,62,2062	0/0:21,0:19:20.20:0,20,477	0/0:19,0:16:35.06:0,35,892	0/0:35,0:34:94.22:0,94,3014	0/0:11,0:11:30.09:0,30,927	1/1:9,12:21:61.74:1180,62,0	1/1:6,10:16:38.44:849,38,0	1/1:16,2:19:24.43:387,24,0	1/1:25,0:25:34.34:570,34,0	0/0:32,0:32:93.13:0,93,2773	0/0:27,0:26:72.20:0,72,2286	0/0:7,0:7:21.07:0,21,859
chr10	74258999	.	AAAAAAAC	A	4960.14	PASS	AB=0.978;AC=22;AF=0.407;AN=54;BaseQRankSum=13.294;DP=602;FS=0.783;HRun=0;HaplotypeScore=194.6866;InbreedingCoeff=0.6922;MQ=48.57;MQ0=13;MQRankSum=-9.457;QD=18.04;ReadPosRankSum=5.873;VQSLOD=3.6599;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,3:27:38.97:557,39,0	0/0:14,0:12:33.11:0,33,1013	0/1:9,0:4:8.53:9,0,79	./.	0/0:30,0:30:60.19:0,60,1463	0/0:31,0:30:69.66:0,70,1736	0/0:23,0:23:60.19:0,60,1221	1/1:24,0:19:32.93:326,33,0	1/1:12,0:12:12.31:262,12,0	1/1:33,0:30:53.60:628,54,0	0/1:14,0:13:16.41:158,0,16	0/1:23,0:23:24.01:511,0,24	1/1:15,0:15:20.83:348,21,0	0/0:18,0:18:42.60:0,43,879	0/0:23,0:23:63.19:0,63,1472	0/0:19,0:19:48.16:0,48,1226	0/0:27,0:27:56.29:0,56,1483	0/1:19,2:19:8.81:378,0,9	0/0:21,0:18:30.33:0,30,624	0/0:35,0:34:84.25:0,84,2086	0/0:10,0:10:24.08:0,24,688	1/1:25,0:25:22.80:589,23,0	1/1:22,0:22:22.10:484,22,0	1/1:25,0:25:6.90:183,7,0	1/1:25,0:25:36.11:530,36,0	0/0:32,0:32:81.14:0,81,1959	0/0:26,0:25:68.40:0,68,1674	0/0:7,0:7:18.06:0,18,662
chr10	74259000	.	AAAAAACAAAAAAC	A	7074.10	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=12.797;DP=603;FS=1.242;HRun=0;HaplotypeScore=253.3889;InbreedingCoeff=0.1834;MQ=48.65;MQ0=13;MQRankSum=-8.379;QD=26.59;ReadPosRankSum=5.024;VQSLOD=3.5596;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:53.14:53,0,198	0/0:14,0:12:33.11:0,33,1670	0/0:9,0:4:9.03:0,9,172	0/0:11,0:1:0:0,0,0	0/0:30,0:30:63.20:0,63,2446	0/0:31,0:30:69.88:0,70,2799	0/0:24,0:24:63.21:0,63,2064	0/1:24,0:19:99:159,0,138	0/1:12,0:12:47.84:395,0,48	1/1:29,4:30:81.25:1822,81,0	1/1:11,1:13:29.98:500,30,0	0/1:23,0:23:89.84:710,0,90	0/1:14,0:14:11.32:464,0,11	0/0:18,0:18:42.60:0,43,1384	0/0:24,0:24:66.20:0,66,2519	0/0:18,0:18:51.17:0,51,1980	0/0:26,0:26:56.16:0,56,2334	0/1:21,0:19:76.50:76,0,309	0/0:21,0:18:33.22:0,33,1006	0/0:34,0:33:84.27:0,84,3364	0/0:11,0:11:27.09:0,27,1093	0/1:26,0:26:99:807,0,134	0/1:22,0:22:85.41:686,0,85	0/1:25,0:25:99:226,0,157	1/1:18,7:25:39.13:1175,39,0	0/0:32,0:32:81.16:0,81,3196	0/0:27,0:26:71.41:0,71,2659	0/0:7,0:7:18.06:0,18,1009
chr10	74259006	.	CA	C	3633.62	PASS	AB=0.793;AC=20;AF=0.370;AN=54;BaseQRankSum=12.905;DP=620;FS=0.000;HRun=7;HaplotypeScore=140.5509;InbreedingCoeff=0.6527;MQ=49.31;MQ0=14;MQRankSum=-12.360;QD=13.31;ReadPosRankSum=2.968;VQSLOD=2.0706;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,4:30:5.56:174,6,0	0/0:13,0:12:35.82:0,36,419	0/0:14,0:7:10.36:0,10,96	./.	0/0:30,0:30:78.24:0,78,1002	0/0:30,0:29:75.59:0,76,960	0/0:26,0:26:69.20:0,69,871	0/1:5,9:18:21.29:164,0,21	1/1:3,9:12:33.02:318,33,0	1/1:22,11:30:2.19:314,2,0	0/1:14,2:15:17.18:109,0,17	0/1:14,7:21:3.41:409,0,3	1/1:8,6:14:29.98:268,30,0	0/0:18,0:18:36.06:0,36,439	0/0:26,0:26:75.16:0,75,910	0/0:19,0:19:54.17:0,54,698	0/0:24,0:24:59.05:0,59,688	0/1:13,5:20:39.81:223,0,40	0/0:21,0:18:27.67:0,28,462	0/0:34,0:33:85.94:0,86,1034	0/0:12,0:12:33.11:0,33,427	1/1:14,13:27:75.01:698,75,0	1/1:13,12:25:47.63:415,48,0	1/1:9,16:25:34.23:325,34,0	1/1:20,5:25:30.84:216,31,0	0/0:34,0:33:84.69:0,85,1060	0/0:31,0:30:86.45:0,86,1049	0/0:7,0:7:18.06:0,18,237
chr10	74259008	.	AAAAAC	A	2171.56	PASS	AB=0.967;AC=14;AF=0.259;AN=54;BaseQRankSum=12.359;DP=622;FS=0.827;HRun=0;HaplotypeScore=188.3830;InbreedingCoeff=0.0386;MQ=49.56;MQ0=14;MQRankSum=-6.682;QD=7.95;ReadPosRankSum=4.755;VQSLOD=2.6772;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:38.85:104,0,39	0/0:13,0:12:36.12:0,36,916	0/0:14,0:7:13.39:0,13,115	./.	0/0:31,0:31:75.63:0,76,1711	0/0:31,0:30:82.97:0,83,1735	0/0:26,0:26:69.21:0,69,1497	0/1:21,0:16:18.55:19,0,20	0/1:13,0:13:21.55:22,0,164	1/1:19,15:31:43.96:910,44,0	0/1:8,8:15:35.61:246,0,36	0/1:21,0:21:99:104,0,138	0/1:15,0:15:75.11:92,0,75	0/0:18,0:18:38.82:0,39,753	0/0:26,0:26:72.18:0,72,1663	0/0:19,0:19:54.16:0,54,1230	0/0:24,0:24:53.51:0,54,1325	0/1:21,0:19:65.29:65,0,155	0/0:22,0:19:37.33:0,37,784	0/0:34,0:33:87.14:0,87,1916	0/0:12,0:12:33.09:0,33,834	0/1:29,0:29:99:107,0,359	0/1:25,0:25:99:143,0,152	0/1:25,0:25:11.09:11,0,275	1/1:12,13:25:29.45:514,29,0	0/0:33,0:32:37.14:0,37,1853	0/0:32,0:31:82.99:0,83,1807	0/0:7,0:7:18.03:0,18,523
chr10	74259070	.	CA	C	1232.48	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.557;DP=681;FS=1.266;HRun=6;HaplotypeScore=95.5512;InbreedingCoeff=0.9910;MQ=62.35;MQ0=4;MQRankSum=-0.204;QD=26.79;ReadPosRankSum=-0.392;VQSLOD=3.3277;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:78.25:0,78,1025	0/0:13,0:13:30.10:0,30,393	0/0:19,1:14:33.10:0,33,401	0/0:25,1:16:27.62:0,28,378	0/0:24,0:24:72.22:0,72,926	0/0:25,0:25:69.22:0,69,905	0/0:22,0:22:51.12:0,51,649	1/1:1,20:21:57.14:613,57,0	0/0:18,0:18:51.12:0,51,650	0/0:33,0:33:87.24:0,87,1110	0/0:17,0:17:39.08:0,39,493	0/0:28,0:28:69.18:0,69,879	0/0:21,0:20:51.12:0,51,650	0/0:18,0:18:51.17:0,51,671	0/0:22,0:22:60.20:0,60,788	0/0:23,0:23:60.31:0,60,807	0/0:32,0:32:90.21:0,90,1127	1/1:2,23:25:69.17:741,69,0	0/0:22,0:21:51.17:0,51,666	0/0:27,0:27:72.23:0,72,944	0/0:16,0:16:48.13:0,48,602	0/0:33,0:33:93.26:0,93,1188	0/0:25,0:25:57.14:0,57,716	0/0:35,0:35:75.16:0,75,946	0/0:27,0:27:48.08:0,48,585	0/0:32,0:32:93.29:0,93,1209	0/0:35,0:33:90.29:0,90,1177	0/0:5,0:5:15.05:0,15,197
chr10	74259500	.	CTG	C	4280.26	PASS	AB=0.513;AC=11;AF=0.196;AN=56;BaseQRankSum=10.179;DP=477;FS=1.941;HRun=0;HaplotypeScore=63.1198;InbreedingCoeff=0.9324;MQ=70.79;MQ0=2;MQRankSum=-0.556;QD=36.58;ReadPosRankSum=1.846;VQSLOD=6.6202;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.13:0,39,742	0/0:6,0:6:18.06:0,18,347	0/0:11,0:11:30.10:0,30,515	0/0:10,0:10:23.97:0,24,353	0/0:23,0:23:66.18:0,66,1173	0/0:24,0:24:69.22:0,69,1298	0/0:27,0:27:81.25:0,81,1437	0/0:20,0:20:60.18:0,60,1092	0/0:18,0:18:48.16:0,48,924	0/0:25,0:25:72.24:0,72,1324	0/0:13,0:13:36.11:0,36,652	0/0:11,0:11:27.08:0,27,488	0/0:21,0:21:47.96:0,48,849	0/0:12,0:12:36.11:0,36,660	0/0:13,0:13:39.12:0,39,720	0/0:14,0:14:42.13:0,42,778	0/0:22,0:22:63.17:0,63,1123	0/0:12,0:12:33.06:0,33,554	1/1:0,23:23:66.22:1003,66,0	1/1:0,21:21:54.11:776,54,0	1/1:0,16:16:33.11:505,33,0	0/0:18,0:18:45.13:0,45,828	0/0:15,0:15:30.08:0,30,525	0/0:12,0:12:18.06:0,18,347	0/0:20,0:20:60.21:0,60,1151	0/1:1,19:19:0.78:745,0,1	1/1:0,29:28:69.23:1048,69,0	1/1:1,7:8:15.02:205,15,0
chr10	74259572	.	T	TTTTTTTG	6700.83	PASS	AB=0.907;AC=21;AF=0.375;AN=56;BaseQRankSum=10.107;DP=596;FS=2.181;HRun=0;HaplotypeScore=248.6101;InbreedingCoeff=0.6024;MQ=57.01;MQ0=3;MQRankSum=-10.915;QD=21.97;ReadPosRankSum=-2.867;VQSLOD=4.1793;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:19:16.15:213,0,16	0/0:5,0:5:9:0,9,80	0/0:9,0:8:11.08:0,11,120	0/0:19,0:12:26.90:0,27,287	0/0:25,0:25:72.14:0,72,1320	0/0:19,0:19:54.12:0,54,993	0/0:17,0:17:48.10:0,48,853	0/0:29,0:23:18.27:0,18,130	1/1:3,19:28:29.48:854,29,0	1/1:36,0:34:55.51:1000,56,0	1/1:35,0:35:76.20:1092,76,0	0/1:2,9:15:11:423,0,11	1/1:3,14:18:9.03:272,9,0	0/0:17,0:17:37.74:0,38,883	0/0:10,0:10:30.08:0,30,610	0/1:18,0:18:6.99:7,0,867	0/0:38,0:38:99:0,99,1858	0/1:9,0:9:16.57:43,0,17	0/0:25,0:25:59.15:0,59,1021	0/0:17,0:17:48.10:0,48,860	0/0:9,0:9:15.04:0,15,284	1/1:3,15:20:36.06:726,36,0	1/1:1,15:20:16.10:301,16,0	1/1:1,11:16:3.69:132,4,0	1/1:45,0:44:99:1631,103,0	0/1:25,0:25:5.70:6,0,1054	0/0:34,0:34:90.22:0,90,1743	0/0:18,0:18:45.12:0,45,916
chr10	74259575	.	T	TG	1764.61	PASS	AB=0.933;AC=12;AF=0.214;AN=56;BaseQRankSum=11.929;DP=598;FS=13.114;HRun=0;HaplotypeScore=145.6100;InbreedingCoeff=0.4884;MQ=56.58;MQ0=4;MQRankSum=-8.124;QD=8.82;ReadPosRankSum=-1.351;VQSLOD=2.9901;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:18:1.03:49,0,1	1/1:5,0:5:5.67:17,6,0	0/0:9,0:8:14.77:0,15,145	0/0:17,0:10:23.26:0,23,316	0/0:25,0:25:75.15:0,75,1001	0/0:18,0:18:54.18:0,54,749	0/0:16,0:16:48.16:0,48,670	0/1:22,0:24:18.45:128,0,18	0/0:29,0:29:3.80:0,4,72	1/1:28,9:35:4.73:578,5,0	0/1:32,2:34:27.78:328,0,28	0/0:15,0:15:11.25:0,11,82	0/0:16,0:16:5.15:0,5,33	0/0:16,0:16:42.42:0,42,594	0/0:11,0:11:33.10:0,33,443	0/0:20,0:20:53.01:0,53,714	0/0:37,0:37:99:0,111,1400	1/1:6,0:8:11.63:73,12,0	0/0:26,0:26:72.17:0,72,921	0/0:19,0:19:57.13:0,57,729	0/0:9,0:9:18.04:0,18,232	0/1:20,0:20:18.40:74,0,18	0/0:20,0:20:14.20:0,14,106	0/0:16,0:16:2.68:0,3,32	1/1:36,10:45:38.84:677,39,0	0/0:26,0:26:69.22:0,69,934	0/0:35,0:35:99:0,99,1297	0/0:18,0:18:45.15:0,45,627
chr10	74259580	.	TTTTG	T	1554.15	PASS	AB=0.942;AC=9;AF=0.161;AN=56;BaseQRankSum=9.011;DP=613;FS=2.712;HRun=0;HaplotypeScore=176.2673;InbreedingCoeff=0.5795;MQ=55.24;MQ0=5;MQRankSum=-10.253;QD=9.20;ReadPosRankSum=-1.519;VQSLOD=3.1471;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,2:18:14.18:177,14,0	0/0:5,0:5:12.04:0,12,265	0/0:8,0:7:6.37:0,6,124	0/0:16,0:9:20.66:0,21,287	0/0:24,0:24:72.24:0,72,1690	0/0:17,0:17:51.11:0,51,1092	0/0:18,0:18:54.18:0,54,1214	1/1:27,1:22:53.95:485,54,0	0/0:31,0:31:28.91:0,29,742	0/1:30,5:33:99:377,0,118	0/1:33,1:34:9.02:335,0,9	0/0:16,0:16:21.07:0,21,424	0/0:17,0:17:15.01:0,15,303	0/0:15,0:15:45.15:0,45,1070	0/0:13,0:13:39.13:0,39,838	0/0:21,0:21:63.21:0,63,1509	0/0:40,0:40:99:0,120,2824	1/1:8,0:7:17.52:148,18,0	0/0:28,0:28:84.26:0,84,1775	0/0:21,0:21:60.20:0,60,1341	0/0:10,0:10:15.68:0,16,417	0/0:21,0:21:47.99:0,48,811	0/0:20,0:20:21.07:0,21,439	0/0:18,0:18:17.06:0,17,231	0/1:44,1:44:99:189,0,308	0/0:30,0:30:84.07:0,84,1782	0/0:36,0:36:99:0,99,2326	0/0:19,0:19:44.64:0,45,1038
chr10	74259581	.	TTTG	T	2304.18	PASS	AB=0.873;AC=8;AF=0.143;AN=56;BaseQRankSum=8.680;DP=612;FS=7.190;HRun=0;HaplotypeScore=163.6541;InbreedingCoeff=0.3721;MQ=55.11;MQ0=5;MQRankSum=-9.650;QD=13.72;ReadPosRankSum=-3.168;VQSLOD=2.0205;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:18:72.52:163,0,73	0/0:4,0:4:11.87:0,12,209	0/0:8,0:7:8.83:0,9,96	0/0:16,0:9:20.56:0,21,285	0/0:24,0:24:72.25:0,72,1472	0/0:17,0:17:51.11:0,51,957	0/0:18,0:18:54.18:0,54,1092	1/1:27,1:22:57.35:596,57,0	0/0:31,0:31:37.67:0,38,651	0/1:29,5:32:99:528,0,154	0/1:24,10:34:99:560,0,122	0/0:16,0:16:21.07:0,21,392	0/0:15,0:15:15.04:0,15,273	0/0:17,0:17:51.14:0,51,974	0/0:14,0:14:42.13:0,42,773	0/0:21,0:21:63.22:0,63,1312	0/0:41,0:41:99:0,123,2466	1/1:7,1:7:11.95:186,12,0	0/0:28,0:28:84.27:0,84,1612	0/0:20,0:20:60.20:0,60,1182	0/0:10,0:10:8.01:0,8,355	0/0:21,0:21:47.99:0,48,791	0/0:20,0:20:21.07:0,21,395	0/0:17,0:17:17.98:0,18,248	0/1:37,8:44:99:415,0,221	0/0:30,0:30:84.25:0,84,1593	0/0:36,0:36:99:0,99,2001	0/0:20,0:20:19.62:0,20,853
chr10	74259583	.	TG	T	779.43	PASS	AB=0.948;AC=9;AF=0.161;AN=56;BaseQRankSum=10.736;DP=604;FS=0.943;HRun=1;HaplotypeScore=146.8263;InbreedingCoeff=0.5160;MQ=54.61;MQ0=5;MQRankSum=-12.026;QD=4.78;ReadPosRankSum=1.650;VQSLOD=0.4664;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,3:17:32.31:217,32,0	0/0:4,0:4:11.87:0,12,139	0/0:10,0:9:5.15:0,5,111	0/0:13,0:7:18.88:0,19,206	0/0:24,0:24:72.22:0,72,981	0/0:17,0:17:51.11:0,51,669	0/0:19,0:19:57.18:0,57,773	0/1:22,5:21:16.46:121,0,16	0/0:30,0:30:37.60:0,38,403	0/1:34,0:32:80.45:123,0,80	1/1:33,1:34:8.29:253,8,0	0/0:16,0:16:21.05:0,21,265	0/0:15,0:15:11.97:0,12,158	0/0:17,0:17:51.09:0,51,651	0/0:14,0:14:42.10:0,42,547	0/0:21,0:21:63.20:0,63,862	0/0:42,0:42:99:0,120,1612	1/1:7,0:6:9.64:42,10,0	0/0:29,0:29:87.23:0,87,1152	0/0:20,0:20:60.18:0,60,816	0/0:10,0:10:14.70:0,15,245	0/0:20,0:20:47.67:0,48,557	0/0:19,0:19:21.04:0,21,276	0/0:17,0:17:17.07:0,17,181	0/1:43,0:42:99:173,0,115	0/0:29,0:29:81.71:0,82,1081	0/0:35,0:35:99:0,99,1326	0/0:18,1:19:8.18:0,8,539
chr10	74259595	.	TG	T	2029.72	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.744;DP=635;FS=23.742;HRun=1;HaplotypeScore=144.4082;InbreedingCoeff=0.9323;MQ=53.18;MQ0=6;MQRankSum=-10.784;QD=10.46;ReadPosRankSum=1.306;VQSLOD=0.3576;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,1:24:24.84:96,25,0	0/0:5,0:5:15.05:0,15,193	0/0:13,0:10:12.59:0,13,172	0/0:8,1:3:1.55:0,2,41	0/0:25,0:25:75.13:0,75,874	0/0:13,0:13:39.13:0,39,504	0/0:19,0:19:57.09:0,57,661	1/1:26,8:27:37.19:337,37,0	0/0:33,1:34:40.24:0,40,546	1/1:23,14:34:60.73:518,61,0	1/1:23,15:38:27.78:499,28,0	0/0:17,0:17:27.08:0,27,320	0/0:16,0:16:26.42:0,26,277	0/0:18,0:18:53.35:0,53,637	0/0:13,0:13:39.13:0,39,503	0/0:24,0:24:72.20:0,72,902	0/0:40,1:41:99:0,119,1439	1/1:3,10:12:26.95:293,27,0	0/0:28,0:28:80.36:0,80,870	0/0:24,0:24:72.09:0,72,863	0/0:13,0:13:9.93:0,10,301	0/0:18,0:18:36.19:0,36,405	0/0:19,0:19:26.08:0,26,255	0/0:12,0:12:11.89:0,12,160	1/1:36,11:46:57.23:473,57,0	0/0:29,1:30:43.85:0,44,908	0/0:32,0:32:90.18:0,90,1140	0/0:17,1:18:28.80:0,29,562
chr10	74259596	.	GT	G	614.58	PASS	AB=0.983;AC=7;AF=0.125;AN=56;BaseQRankSum=11.588;DP=637;FS=26.918;HRun=8;HaplotypeScore=150.4952;InbreedingCoeff=0.4447;MQ=53.12;MQ0=7;MQRankSum=-7.821;QD=3.64;ReadPosRankSum=-1.451;VQSLOD=-0.6953;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:24:18.88:0,19,178	0/0:5,0:5:15.05:0,15,181	0/0:13,0:10:15.93:0,16,183	0/0:9,0:3:4.26:0,4,39	0/0:25,0:25:66.07:0,66,775	0/0:13,0:13:39.12:0,39,471	0/0:19,0:19:48.13:0,48,568	1/1:31,3:27:60.33:300,60,0	0/0:33,0:33:44.68:0,45,552	0/1:37,1:36:82.01:129,0,82	0/1:36,0:37:86.14:86,0,129	0/0:17,0:17:27.07:0,27,308	0/0:17,0:17:23.01:0,23,281	0/0:19,0:19:52.03:0,52,605	0/0:13,0:13:39.12:0,39,471	0/0:24,0:24:66.13:0,66,797	0/0:42,0:42:99:0,111,1315	1/1:12,1:12:24.49:139,24,0	0/0:29,0:28:69.12:0,69,798	0/0:24,0:24:63.19:0,63,759	0/0:13,0:13:27.55:0,28,327	0/0:18,0:18:14.91:0,15,320	0/0:19,0:19:5.19:0,5,176	0/0:12,0:12:12.09:0,12,164	0/1:47,0:46:99:102,0,116	0/0:29,0:29:54.29:0,54,837	0/0:32,0:32:87.27:0,87,1050	0/0:18,0:18:44.40:0,44,541
chr10	74259605	.	G	GT	1132.07	PASS	AB=0.809;AC=5;AF=0.089;AN=56;BaseQRankSum=11.935;DP=659;FS=15.894;HRun=8;HaplotypeScore=143.9291;InbreedingCoeff=-0.1069;MQ=51.64;MQ0=6;MQRankSum=-11.029;QD=5.99;ReadPosRankSum=3.387;VQSLOD=0.2427;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,5:25:73.31:73,0,368	0/0:5,0:5:15.03:0,15,153	0/0:15,0:9:17.99:0,18,169	0/0:9,0:3:2.97:0,3,29	0/0:22,0:22:51.58:0,52,521	0/0:15,0:15:39.08:0,39,397	0/0:16,0:16:36.03:0,36,356	0/1:36,2:31:86.92:87,0,350	0/0:36,0:36:61.77:0,62,601	0/1:29,11:37:99:265,0,530	0/1:26,10:36:99:273,0,269	0/0:19,0:19:29.97:0,30,302	0/0:13,0:13:27.02:0,27,274	0/0:18,0:18:48.11:0,48,489	0/0:16,0:16:48.08:0,48,480	0/0:22,0:22:60.14:0,60,612	0/0:40,0:40:99:0,111,1091	0/0:15,0:14:15.02:0,15,220	0/0:30,0:29:69.14:0,69,698	0/0:27,0:27:77.98:0,78,764	0/0:12,0:12:32.92:0,33,336	0/0:17,0:17:39.95:0,40,389	0/0:20,0:20:21.63:0,22,197	0/0:18,0:20:35.68:0,36,296	0/1:27,22:48:99:552,0,311	0/0:28,1:29:61.87:0,62,798	0/0:34,0:34:95.57:0,96,950	0/0:20,0:20:48.08:0,48,481
chr10	74259612	.	G	GT	1289.61	PASS	AB=0.804;AC=5;AF=0.089;AN=56;BaseQRankSum=11.409;DP=657;FS=10.296;HRun=6;HaplotypeScore=138.6475;InbreedingCoeff=-0.1116;MQ=54.14;MQ0=4;MQRankSum=-10.444;QD=6.90;ReadPosRankSum=2.216;VQSLOD=0.2218;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,2:25:46.82:47,0,460	0/0:5,0:5:15.03:0,15,153	0/0:17,0:11:26.79:0,27,251	0/0:7,0:4:2.97:0,3,30	0/0:19,0:19:51.08:0,51,512	0/0:15,0:15:36.08:0,36,367	0/0:13,0:13:33.07:0,33,337	0/1:32,5:30:94.08:94,0,447	0/0:35,0:36:65.04:0,65,663	0/1:29,11:38:99:286,0,621	0/1:21,14:35:99:375,0,505	0/0:17,0:17:33.07:0,33,335	0/0:16,0:16:39.06:0,39,384	0/0:19,0:19:57.13:0,57,581	0/0:16,0:16:42.09:0,42,428	0/0:24,0:24:72.10:0,72,711	0/0:41,0:41:99:0,105,1059	0/0:14,0:13:4.53:0,5,220	0/0:29,0:28:81.14:0,81,814	0/0:27,0:27:75.16:0,75,758	0/0:13,0:13:33.06:0,33,330	0/0:19,0:19:54.07:0,54,538	0/0:18,0:18:29.98:0,30,303	0/0:23,0:23:54.48:0,54,525	0/1:29,20:48:99:605,0,516	0/0:31,0:31:83.86:0,84,837	0/0:34,0:34:75.14:0,75,757	0/0:16,0:16:48.08:0,48,480
chr10	74259619	.	G	GT	836.14	PASS	AB=0.838;AC=5;AF=0.089;AN=56;BaseQRankSum=10.548;DP=668;FS=10.337;HRun=6;HaplotypeScore=138.6382;InbreedingCoeff=-0.1046;MQ=58.83;MQ0=3;MQRankSum=-9.464;QD=5.10;ReadPosRankSum=1.650;VQSLOD=-0.0282;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,2:24:12.32:12,0,453	0/0:5,0:5:15.03:0,15,153	0/0:22,0:17:32.97:0,33,396	0/0:7,0:5:2.97:0,3,31	0/0:19,0:19:45.10:0,45,459	0/0:13,0:13:39.03:0,39,379	0/0:16,0:16:42.09:0,42,426	0/0:37,0:33:59.46:0,59,603	0/0:32,1:33:53.17:0,53,703	0/1:31,9:38:99:208,0,704	0/1:27,9:36:99:245,0,558	0/0:18,0:18:33.07:0,33,335	0/0:17,0:17:42.09:0,42,428	0/0:22,0:22:60.11:0,60,603	0/0:16,0:16:48.11:0,48,489	0/0:27,0:27:78.18:0,78,795	0/0:39,0:39:99:0,99,997	0/1:14,2:15:39.33:39,0,258	0/0:32,0:31:84.15:0,84,842	0/0:29,0:29:78.17:0,78,795	0/0:13,0:13:32.97:0,33,322	0/0:20,0:20:54.12:0,54,549	0/0:18,0:18:30.43:0,30,293	0/0:24,0:24:56.41:0,56,553	0/1:32,15:46:99:447,0,575	0/0:30,0:30:87.18:0,87,875	0/0:29,0:29:72.16:0,72,733	0/0:18,0:18:45.09:0,45,458
chr10	74260094	.	TAC	T	245.64	PASS	AB=0.955;AC=20;AF=0.370;AN=54;BaseQRankSum=7.187;DP=508;FS=4.730;HRun=0;HaplotypeScore=104.3003;InbreedingCoeff=-0.0121;MQ=56.91;MQ0=13;MQRankSum=-4.028;QD=0.81;ReadPosRankSum=-0.511;VQSLOD=1.4033;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:29:2.35:5,0,2	0/0:12,0:12:25.89:0,26,335	0/0:28,0:10:5.89:0,6,56	0/0:32,0:16:3.01:0,3,40	0/1:15,1:16:1.47:1,0,393	0/0:19,0:19:29.70:0,30,540	0/1:8,1:10:4.41:4,0,359	./.	0/1:22,0:20:12.07:21,0,12	1/1:26,0:26:18.24:78,18,0	0/0:6,0:6:0.47:0,0,1	0/1:17,0:17:8.65:9,0,18	1/1:11,0:11:11.35:56,11,0	0/1:14,1:15:10.64:11,0,242	0/1:19,1:19:25.78:26,0,458	0/0:18,0:17:36.10:0,36,530	0/1:19,1:20:47.27:47,0,461	1/1:12,0:12:1.99:26,2,0	0/0:18,0:16:13.82:0,14,151	0/1:11,0:11:16.35:16,0,197	0/1:48,5:53:47.73:48,0,1065	0/1:14,0:14:1.64:2,0,10	0/0:9,0:9:3:0,3,25	0/0:16,0:16:2.98:0,3,21	1/1:15,0:15:2.80:13,3,0	0/0:24,0:24:36.64:0,37,623	0/0:4,0:5:0.98:0,1,169	0/1:5,1:6:31.20:31,0,125
chr10	74260116	.	CACACACAA	C	2180.70	PASS	AB=1.000;AC=23;AF=0.426;AN=54;BaseQRankSum=3.916;DP=630;FS=17.418;HRun=0;HaplotypeScore=178.6151;InbreedingCoeff=0.6563;MQ=49.59;MQ0=28;MQRankSum=-5.536;QD=8.39;ReadPosRankSum=-3.057;VQSLOD=0.8800;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:47,0:39:6.06:149,6,0	0/1:15,0:15:8.41:8,0,917	0/0:34,0:6:5.12:0,5,30	0/0:37,0:8:13.13:0,13,66	0/0:15,0:15:41.47:0,41,1103	0/0:25,0:25:18.61:0,19,1371	0/0:14,0:14:32.18:0,32,1189	0/1:16,0:14:3.63:246,0,4	1/1:24,1:23:29.85:218,30,0	1/1:21,5:26:51.10:879,51,0	1/1:6,0:6:8.93:72,9,0	1/1:24,0:24:1.85:22,2,0	1/1:11,0:11:14.47:113,14,0	0/0:16,0:16:29.44:0,29,777	0/0:25,0:24:59.88:0,60,1467	0/0:21,0:20:48.13:0,48,1607	0/0:26,0:26:59.52:0,60,1695	1/1:15,0:15:8.83:263,9,0	0/1:17,0:15:21.12:21,0,400	0/0:11,0:11:23.94:0,24,391	0/0:80,0:80:99:0,113,3736	1/1:16,0:16:1.91:169,2,0	./.	1/1:20,1:21:18.56:132,19,0	1/1:4,17:21:3.01:81,3,0	0/0:26,0:26:19.03:0,19,1706	0/0:15,0:15:44.96:0,45,908	0/0:11,0:11:32.04:0,32,762
chr10	74260118	.	CACACAA	C	2486.64	PASS	AB=0.853;AC=23;AF=0.426;AN=54;BaseQRankSum=3.528;DP=635;FS=16.391;HRun=0;HaplotypeScore=163.2450;InbreedingCoeff=0.7233;MQ=49.75;MQ0=26;MQRankSum=-5.551;QD=8.94;ReadPosRankSum=-3.126;VQSLOD=1.3165;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:44,0:38:12.81:130,13,0	0/0:15,0:15:4.16:0,4,700	0/1:34,0:6:11.75:12,0,17	0/0:37,0:8:12.93:0,13,64	0/0:15,0:15:41.45:0,41,844	0/0:25,0:25:18.40:0,18,1111	0/0:15,0:15:35.14:0,35,928	1/1:17,0:15:16.46:226,16,0	1/1:21,4:23:31.83:355,32,0	1/1:26,0:26:65.91:691,66,0	1/1:6,0:6:8.98:72,9,0	0/1:5,19:24:3.44:63,0,3	1/1:0,11:11:14.51:284,15,0	0/0:16,0:16:29.43:0,29,604	0/0:25,0:24:47.10:0,47,1088	0/0:20,0:19:48.13:0,48,1303	0/0:28,0:27:43.08:0,43,1327	1/1:12,3:15:37.31:410,37,0	0/1:17,0:15:20.30:20,0,332	0/0:11,0:11:23.94:0,24,342	0/0:85,0:85:99:0,120,3091	1/1:16,0:16:23.82:198,24,0	./.	1/1:20,2:22:23.48:181,23,0	1/1:20,0:20:3.01:49,3,0	0/0:26,0:26:7.41:0,7,1305	0/0:16,0:16:46.97:0,47,702	0/0:11,0:11:31.24:0,31,603
chr10	74260148	.	TACAC	T	735.48	PASS	AB=0.844;AC=4;AF=0.074;AN=54;BaseQRankSum=6.241;DP=687;FS=9.466;HRun=0;HaplotypeScore=159.0211;InbreedingCoeff=-0.0874;MQ=49.97;MQ0=16;MQRankSum=-6.070;QD=4.48;ReadPosRankSum=-2.540;VQSLOD=1.3850;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:45,8:45:99:300,0,512	0/0:10,0:10:18.06:0,18,406	0/0:42,1:5:5.99:0,6,60	0/1:37,0:8:7.38:7,0,123	0/0:18,0:19:50.96:0,51,1126	0/0:19,0:19:37.37:0,37,880	0/0:18,0:18:42.13:0,42,977	0/1:28,22:46:99:420,0,310	0/0:22,0:22:41.62:0,42,850	0/0:19,0:19:35.61:0,36,665	0/0:7,0:7:12.04:0,12,250	0/0:16,0:16:6.02:0,6,151	0/0:14,0:14:20.93:0,21,408	0/0:21,0:21:47.33:0,47,1052	0/0:21,0:21:48.04:0,48,1013	0/0:23,0:23:54.18:0,54,1236	0/0:27,0:26:58.46:0,58,1336	0/1:14,2:16:99:112,0,157	0/0:21,0:21:49.98:0,50,989	0/0:8,0:8:24.04:0,24,542	0/0:91,0:92:99:0,201,4461	0/0:15,0:15:23.83:0,24,566	./.	0/0:28,0:28:39.13:0,39,951	0/0:22,0:22:27.09:0,27,519	0/0:21,0:21:48.16:0,48,1050	0/0:15,0:15:39.04:0,39,896	0/0:12,0:12:30.07:0,30,565
chr10	74260153	.	A	ACACT	627.66	PASS	AB=0.863;AC=3;AF=0.054;AN=56;BaseQRankSum=3.845;DP=709;FS=3.484;HRun=0;HaplotypeScore=172.6328;InbreedingCoeff=-0.0689;MQ=53.13;MQ0=16;MQRankSum=-6.328;QD=4.98;ReadPosRankSum=-1.580;VQSLOD=2.6154;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:53,0:45:99:177,0,231	0/0:11,0:11:33.02:0,33,431	0/0:46,0:8:11.53:0,12,86	0/0:41,0:8:14.19:0,14,147	0/0:20,0:20:54.18:0,54,967	0/0:21,0:21:46.77:0,47,723	0/0:16,0:16:42.12:0,42,732	0/1:54,3:47:99:270,0,528	0/0:21,0:21:29.36:0,29,654	0/0:20,0:20:46.44:0,46,694	0/0:9,0:9:15.04:0,15,252	0/0:16,0:16:6.02:0,6,114	0/0:17,0:17:22.41:0,22,376	0/0:22,0:22:52.65:0,53,807	0/0:21,0:21:51.02:0,51,865	0/0:20,0:20:57.10:0,57,992	0/0:28,0:27:66.18:0,66,1165	0/1:7,9:16:99:280,0,127	0/0:22,0:22:50.85:0,51,809	0/0:8,0:8:24.04:0,24,418	0/0:100,0:100:99:0,237,3652	0/0:17,0:17:30.08:0,30,505	0/0:10,0:10:2.99:0,3,24	0/0:27,0:27:36:0,36,678	0/0:21,0:21:27.08:0,27,487	0/0:22,0:22:63.14:0,63,925	0/0:16,0:16:42.10:0,42,722	0/0:11,0:11:33.03:0,33,478
chr10	74260155	.	A	ACT	655.72	PASS	AB=0.898;AC=3;AF=0.054;AN=56;BaseQRankSum=3.201;DP=710;FS=2.623;HRun=0;HaplotypeScore=145.9474;InbreedingCoeff=-0.0635;MQ=53.34;MQ0=16;MQRankSum=-5.599;QD=5.25;ReadPosRankSum=-0.162;VQSLOD=3.0426;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,23:44:99:661,0,263	0/0:11,0:11:33.02:0,33,391	0/0:46,0:8:11.84:0,12,89	0/0:38,0:8:17.65:0,18,125	0/0:19,0:19:54.12:0,54,769	0/0:21,0:21:45.45:0,45,617	0/0:17,0:17:45.11:0,45,625	0/1:57,0:47:15.92:16,0,507	0/0:21,1:22:26.85:0,27,571	0/0:21,0:21:55.44:0,55,670	0/0:9,0:9:18.03:0,18,234	0/0:17,0:17:11.78:0,12,130	0/0:17,0:17:27.52:0,28,347	0/0:23,0:23:38.93:0,39,664	0/0:20,0:20:51:0,51,713	0/0:21,0:21:60.11:0,60,850	0/0:27,1:27:69.15:0,69,974	0/1:16,0:16:77.83:78,0,92	0/0:22,0:22:47.05:0,47,688	0/0:8,0:8:24.04:0,24,341	0/0:98,1:99:99:0,237,3062	0/0:17,0:17:30.07:0,30,417	0/0:11,0:11:5.99:0,6,48	0/0:28,0:28:45.08:0,45,618	0/0:20,0:20:27.09:0,27,410	0/0:22,0:22:66.13:0,66,818	0/0:16,0:16:42.09:0,42,586	0/0:11,0:11:33.03:0,33,411
chr10	74260356	.	TCTAC	T	1052.37	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=6.271;DP=738;FS=19.712;HRun=0;HaplotypeScore=142.5983;InbreedingCoeff=0.7192;MQ=56.96;MQ0=8;MQRankSum=0.277;QD=16.70;ReadPosRankSum=-2.269;VQSLOD=1.5667;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:59.47:0,59,1020	0/1:6,0:6:2.59:3,0,218	0/0:63,0:30:42.88:0,43,773	0/0:63,0:35:49.99:0,50,1056	0/0:18,0:18:48.16:0,48,975	0/0:16,0:16:35.16:0,35,863	0/0:30,0:30:75.23:0,75,1591	1/1:6,20:24:15.21:845,15,0	0/0:24,0:24:25.20:0,25,314	0/0:27,0:27:59:0,59,913	0/0:11,0:11:16.58:0,17,206	0/0:24,0:24:29.99:0,30,515	0/0:20,0:20:33.01:0,33,503	0/0:31,0:31:79.30:0,79,1480	0/0:32,0:32:60.65:0,61,1785	0/0:28,0:28:81.28:0,81,1846	0/0:45,0:45:99:0,117,2477	1/1:13,0:13:17.14:322,17,0	0/0:14,0:14:36.07:0,36,567	0/0:16,0:16:42.14:0,42,933	0/0:79,0:79:99:0,186,3662	0/0:14,0:14:24.01:0,24,338	0/0:10,0:10:15.05:0,15,267	0/0:28,0:26:39.12:0,39,746	0/1:18,0:18:1.38:1,0,498	0/0:20,0:20:54.19:0,54,1136	0/0:14,0:14:36.12:0,36,759	0/0:13,0:13:39.13:0,39,871
chr10	74260366	.	TACAC	T	484.60	PASS	AB=0.928;AC=9;AF=0.167;AN=54;BaseQRankSum=4.036;DP=786;FS=3.180;HRun=0;HaplotypeScore=146.2591;InbreedingCoeff=0.4140;MQ=55.58;MQ0=10;MQRankSum=0.500;QD=2.72;ReadPosRankSum=-0.899;VQSLOD=2.6926;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:45:0.84:1,0,339	0/1:7,1:8:32.17:32,0,106	0/1:52,0:20:0:0,0,0	./.	0/0:23,0:25:47.54:0,48,588	0/0:19,0:19:33.08:0,33,665	0/0:29,0:29:51.17:0,51,1099	0/0:23,0:19:2.99:0,3,24	0/0:23,0:24:2.73:0,3,34	1/1:17,15:32:26.86:363,27,0	1/1:3,5:9:3.01:48,3,0	0/0:10,0:32:6:0,6,76	0/0:7,0:22:9.03:0,9,156	0/0:32,0:32:66:0,66,1121	0/0:35,0:36:71.59:0,72,1254	0/0:29,0:31:59.75:0,60,1083	0/0:52,0:53:84.39:0,84,1567	0/1:11,0:11:0.47:23,0,0	0/0:12,0:12:13.14:0,13,92	0/0:18,0:18:30.08:0,30,632	0/0:80,0:82:99:0,132,2032	0/0:7,0:20:4.42:0,4,24	0/0:5,0:11:2.98:0,3,21	0/0:33,0:31:24.03:0,24,382	0/1:14,7:21:2.56:145,0,3	0/0:25,0:25:38.82:0,39,558	0/0:14,0:14:27.02:0,27,460	0/0:14,0:14:35.98:0,36,511
chr10	74260397	.	A	ACACACACA	1103.61	PASS	AB=1.000;AC=22;AF=0.423;AN=52;BaseQRankSum=0.746;DP=857;FS=0.612;HRun=0;HaplotypeScore=219.0397;InbreedingCoeff=0.2842;MQ=60.50;MQ0=12;MQRankSum=-0.517;QD=2.65;ReadPosRankSum=-4.608;VQSLOD=1.7232;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:51,0:51:22.99:175,23,0	0/1:12,0:12:12.98:13,0,86	./.	0/1:33,0:19:0:0,0,0	0/0:24,0:24:20.94:0,21,340	0/1:27,0:27:13.15:13,0,527	0/0:29,0:29:50.08:0,50,708	1/1:25,0:22:1.09:21,1,0	1/1:21,13:35:3.01:67,3,0	0/0:42,0:42:6.57:0,7,313	0/0:11,0:11:3.01:0,3,56	1/1:29,0:29:3.01:123,3,0	1/1:26,0:26:9.03:342,9,0	0/0:31,0:31:36.66:0,37,834	0/0:41,0:41:23.04:0,23,922	0/0:41,0:40:41.99:0,42,812	0/1:45,0:44:10.14:10,0,1241	1/1:8,0:7:5.98:46,6,0	1/1:23,0:23:2.13:6,2,0	0/0:18,0:18:3.04:0,3,378	0/0:99,0:99:16.23:0,16,1085	0/1:27,0:26:0.06:0,0,0	./.	0/1:34,0:32:13.44:396,0,13	0/0:25,0:25:8.89:0,9,167	0/1:25,0:25:41.38:41,0,172	0/0:16,0:16:16.01:0,16,320	0/1:17,0:17:2.98:3,0,304
chr10	74260869	.	GT	G	1096.15	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.485;DP=596;FS=3.158;HRun=1;HaplotypeScore=58.8590;InbreedingCoeff=0.9822;MQ=83.97;MQ0=0;MQRankSum=-0.942;QD=28.11;ReadPosRankSum=-3.116;VQSLOD=2.6310;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1610	0/0:5,0:5:12.04:0,12,167	0/0:28,0:28:78.05:0,78,1030	0/0:19,0:19:44.26:0,44,620	0/0:22,0:22:63.10:0,63,786	0/0:17,0:17:51.14:0,51,677	0/0:17,0:17:51.16:0,51,693	1/1:2,21:23:57.54:679,58,0	0/0:21,0:21:63.19:0,63,848	0/0:29,0:29:87.24:0,87,1140	0/0:23,0:23:69.15:0,69,896	0/0:12,0:12:36.11:0,36,485	0/0:19,0:19:57.15:0,57,741	0/0:17,0:17:51.17:0,51,709	0/0:24,0:24:69.20:0,69,928	0/0:17,0:17:51.15:0,51,694	0/0:37,0:37:99:0,111,1493	1/1:0,16:16:39.13:539,39,0	0/0:13,0:13:39.11:0,39,501	0/0:25,0:25:72.17:0,72,932	0/0:28,0:28:81.15:0,81,1009	0/0:20,0:20:57.18:0,57,776	0/0:26,0:26:69.14:0,69,877	0/0:17,0:17:51.11:0,51,653	0/0:21,0:21:63.20:0,63,862	0/0:26,0:26:74.88:0,75,986	0/0:28,0:28:84.25:0,84,1132	0/0:7,0:7:21.05:0,21,271
chr10	74261194	.	C	CA	1679.37	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.361;DP=749;FS=0.000;HRun=1;HaplotypeScore=70.5447;InbreedingCoeff=0.9451;MQ=82.74;MQ0=0;MQRankSum=-4.379;QD=41.98;ReadPosRankSum=-1.346;VQSLOD=3.5472;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,39:40:99:1774,111,0	0/0:3,0:3:9.03:0,9,126	0/0:24,0:24:71.57:0,72,937	0/0:31,0:30:65.36:0,65,1094	0/0:26,0:26:78.26:0,78,1087	0/0:27,0:27:81.27:0,81,1132	0/0:29,0:29:87.29:0,87,1214	0/0:23,0:23:63.17:0,63,856	0/0:22,0:22:66.22:0,66,919	0/0:28,0:28:84.28:0,84,1174	0/0:26,0:26:75.25:0,75,1048	0/0:30,0:30:84.25:0,84,1140	0/0:30,0:30:90.30:0,90,1253	0/0:31,0:31:84.28:0,84,1173	0/0:30,0:30:87.29:0,87,1215	0/0:21,0:21:60.17:0,60,805	0/0:43,0:43:99:0,126,1761	0/0:18,0:18:51.17:0,51,713	0/0:21,0:21:63.20:0,63,864	0/0:22,0:22:63.21:0,63,880	0/0:34,0:34:99:0,99,1377	0/0:29,0:29:84.24:0,84,1149	0/0:33,0:33:96.32:0,96,1334	0/0:28,0:28:84.27:0,84,1157	0/0:28,0:28:84.28:0,84,1174	0/0:29,0:29:84.19:0,84,1125	0/0:32,0:31:93.31:0,93,1294	0/0:11,0:11:33.11:0,33,461
chr10	74261533	.	C	CGTCTTTCTTTAG	20771.25	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-5.290;DP=559;FS=7.243;HRun=0;HaplotypeScore=173.7204;InbreedingCoeff=0.9877;MQ=84.17;MQ0=0;MQRankSum=-15.988;QD=141.30;ReadPosRankSum=-0.651;VQSLOD=4.9332;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,9:19:51.18:2875,51,0	0/0:5,0:5:15.05:0,15,560	0/0:22,0:22:66.20:0,66,2286	0/0:17,0:17:45.16:0,45,1642	0/0:24,0:24:72.23:0,72,2700	0/0:26,0:26:72.25:0,72,2727	0/0:20,0:20:60.19:0,60,2015	1/1:17,3:24:66.21:3049,66,0	1/1:8,6:16:42.14:2142,42,0	0/0:24,0:24:72.24:0,72,2616	0/0:25,0:25:75.26:0,75,2782	1/1:3,13:17:45.15:2610,45,0	1/1:2,9:16:39.13:2461,39,0	0/0:15,0:15:45.15:0,45,1580	0/0:23,0:23:69.21:0,69,2312	0/0:22,0:22:63.22:0,63,2443	0/0:24,0:24:72.25:0,72,2715	1/1:3,5:11:21.07:1206,21,0	0/0:18,0:18:54.19:0,54,1953	0/0:29,0:29:80.50:0,80,3180	0/0:24,0:24:69.22:0,69,2505	1/1:7,11:18:54.19:2754,54,0	1/1:6,13:21:57.20:3109,57,0	1/1:0,4:5:9.03:565,9,0	0/0:23,0:23:66.23:0,66,2557	0/0:21,0:21:63.21:0,63,2262	0/0:40,0:40:99:0,120,4682	0/0:10,0:10:30.10:0,30,1157
chr10	74262577	.	TAA	T	3787.11	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.128;DP=666;FS=7.309;HRun=2;HaplotypeScore=90.8634;InbreedingCoeff=0.9997;MQ=87.61;MQ0=0;MQRankSum=-0.447;QD=45.08;ReadPosRankSum=1.762;VQSLOD=3.1843;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,2350	0/0:11,0:11:33.11:0,33,670	0/0:33,0:33:99:0,99,1771	0/0:18,0:18:33.76:0,34,1006	0/0:32,0:32:96.33:0,96,1936	0/0:24,0:24:72.23:0,72,1403	0/0:19,0:19:57.15:0,57,1086	0/0:37,0:37:99:0,108,2099	0/0:20,0:20:60.21:0,60,1187	1/1:0,31:31:93.29:1470,93,0	1/1:0,21:21:57.13:898,57,0	0/0:18,0:18:54.19:0,54,1084	0/0:25,0:25:75.26:0,75,1477	0/0:28,0:28:84.29:0,84,1641	0/0:26,0:26:78.27:0,78,1566	0/0:24,0:24:72.25:0,72,1455	0/0:28,0:28:84.27:0,84,1652	0/0:14,0:14:36.09:0,36,642	0/0:12,0:12:36.12:0,36,723	0/0:22,0:22:63.22:0,63,1280	0/0:19,0:19:57.20:0,57,1158	0/0:18,0:18:54.16:0,54,1017	0/0:26,0:26:78.21:0,78,1506	0/0:29,0:29:81.28:0,81,1624	1/1:0,32:32:87.30:1419,87,0	0/0:17,0:17:51.17:0,51,981	0/0:25,0:25:75.24:0,75,1419	0/0:15,0:15:45.15:0,45,914
chr10	74262679	.	CGTGTGT	C	4743.14	PASS	AB=0.658;AC=16;AF=0.286;AN=56;BaseQRankSum=10.168;DP=670;FS=3.328;HRun=0;HaplotypeScore=153.6095;InbreedingCoeff=0.7912;MQ=57.91;MQ0=4;MQRankSum=-10.174;QD=21.86;ReadPosRankSum=1.146;VQSLOD=4.5742;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:43:32.27:455,32,0	0/0:8,0:8:18.06:0,18,565	0/0:42,0:27:33.07:0,33,843	0/0:45,0:29:29.89:0,30,803	0/0:20,0:23:41.34:0,41,1023	0/0:17,0:21:51.13:0,51,1467	0/0:29,0:32:66.19:0,66,1959	0/1:18,19:37:99:973,0,101	1/1:7,20:27:36.12:703,36,0	0/0:21,0:23:48.16:0,48,1330	0/0:14,0:15:6.02:0,6,109	1/1:7,8:16:21.06:385,21,0	1/1:5,14:20:37.49:804,37,0	0/0:19,0:23:40.94:0,41,1189	0/0:22,0:24:57.19:0,57,1761	0/0:26,0:26:51.18:0,51,1596	0/0:23,0:24:57.20:0,57,1778	0/1:10,11:21:77.19:476,0,77	0/0:12,0:13:14.29:0,14,418	0/0:7,0:9:23.32:0,23,732	0/0:34,0:36:90.29:0,90,2745	1/1:5,7:15:19.87:304,20,0	1/1:8,7:15:15.05:284,15,0	1/1:15,7:23:18.06:358,18,0	0/0:12,0:14:15.05:0,15,267	0/0:33,0:33:63.22:0,63,1950	0/0:27,0:32:67.85:0,68,1986	0/0:7,0:7:12.04:0,12,340
chr10	74263096	.	CA	C	5933.51	PASS	AC=18;AF=0.333;AN=54;BaseQRankSum=11.657;DP=420;FS=4.754;HRun=1;HaplotypeScore=56.3850;InbreedingCoeff=0.9963;MQ=94.54;MQ0=0;MQRankSum=-3.401;QD=38.78;ReadPosRankSum=-0.622;VQSLOD=5.0630;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:48.16:671,48,0	0/0:6,0:6:18.06:0,18,288	0/0:17,0:17:33.15:0,33,598	0/0:20,0:20:45.11:0,45,745	0/0:8,0:8:24.08:0,24,384	0/0:13,0:13:39.13:0,39,623	0/0:18,0:18:54.18:0,54,864	1/1:0,16:16:48.15:653,48,0	1/1:0,14:14:39.13:543,39,0	0/0:8,0:8:24.08:0,24,384	0/0:11,0:11:33.10:0,33,500	1/1:0,21:21:63.21:881,63,0	1/1:0,15:15:39.13:545,39,0	0/0:15,0:15:45.15:0,45,717	0/0:14,0:14:42.14:0,42,672	0/0:8,0:8:24.08:0,24,384	0/0:31,0:31:90.31:0,90,1435	1/1:0,16:16:39.13:545,39,0	0/0:6,0:6:18.06:0,18,288	0/0:16,0:16:48.12:0,48,736	0/0:19,0:19:57.19:0,57,907	1/1:0,17:17:48.16:671,48,0	1/1:0,15:15:39.13:544,39,0	1/1:0,23:23:63.21:881,63,0	0/0:13,0:13:39.13:0,39,621	0/0:23,0:23:69.24:0,69,1102	0/0:21,0:21:63.21:0,63,989	./.
chr10	74264604	.	CA	C	9530.56	PASS	AB=0.917;AC=25;AF=0.446;AN=56;BaseQRankSum=4.540;DP=583;FS=5.711;HRun=2;HaplotypeScore=92.9169;InbreedingCoeff=0.9294;MQ=77.92;MQ0=0;MQRankSum=-2.515;QD=34.04;ReadPosRankSum=3.234;VQSLOD=5.0609;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:75.24:960,75,0	0/0:8,0:8:24.07:0,24,340	0/0:20,0:20:60.11:0,60,832	0/0:20,0:20:60.16:0,60,813	0/0:21,0:21:63.21:0,63,943	0/0:11,0:11:33.11:0,33,493	0/0:33,0:33:99:0,99,1450	1/1:0,26:26:75.24:968,75,0	1/1:0,15:15:39.13:506,39,0	1/1:0,25:25:72.23:935,72,0	1/1:0,8:8:24.08:312,24,0	1/1:0,24:24:69.22:895,69,0	1/1:1,20:21:57.18:727,57,0	0/0:24,0:24:69.23:0,69,1023	0/0:19,0:19:57.07:0,57,780	0/0:20,0:20:60.20:0,60,895	0/0:27,0:27:78.26:0,78,1157	1/1:0,22:22:66.21:857,66,0	0/0:18,0:18:48.15:0,48,693	0/0:24,0:24:66.21:0,66,969	0/0:34,0:34:90.30:0,90,1336	1/1:0,23:23:69.22:873,69,0	1/1:0,27:27:81.26:1048,81,0	1/1:0,25:25:69.22:891,69,0	1/1:0,15:15:42.14:545,42,0	0/1:20,2:22:14.38:14,0,785	0/0:16,0:16:48.16:0,48,719	0/0:8,0:8:24.08:0,24,360
chr10	74264689	.	CGA	C	5865.30	PASS	AB=0.960;AC=26;AF=0.464;AN=56;BaseQRankSum=4.218;DP=480;FS=6.048;HRun=0;HaplotypeScore=297.7136;InbreedingCoeff=0.8733;MQ=49.02;MQ0=0;MQRankSum=-3.880;QD=25.61;ReadPosRankSum=2.810;VQSLOD=4.5538;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,22:28:54.18:737,54,0	0/0:4,0:4:12.04:0,12,222	0/1:8,0:8:1.35:1,0,247	0/0:3,0:3:9.03:0,9,157	0/0:13,0:13:24.08:0,24,424	0/0:21,0:20:60.19:0,60,1084	0/0:33,0:33:90.31:0,90,1645	1/1:6,9:15:40.77:457,41,0	1/1:3,16:19:54:662,54,0	1/1:4,14:18:48.56:600,49,0	1/1:3,6:9:14.94:175,15,0	1/1:1,14:15:39.13:533,39,0	1/1:4,17:21:51.17:692,51,0	0/0:23,0:23:48.12:0,48,848	0/0:18,0:18:45.15:0,45,813	0/0:18,0:18:45.15:0,45,838	0/0:19,0:19:39.09:0,39,677	1/1:2,12:14:35.54:453,36,0	0/0:14,0:14:33.10:0,33,555	0/0:19,0:19:51.16:0,51,904	0/0:34,0:34:47.94:0,48,872	1/1:4,10:14:30.10:408,30,0	1/1:1,8:9:21.35:239,21,0	1/1:2,22:24:32.51:446,33,0	1/1:1,11:12:33.11:446,33,0	0/1:21,2:23:14.91:15,0,1041	0/0:21,0:21:51.11:0,51,875	0/0:11,0:11:33.11:0,33,607
chr10	74264772	.	T	TC	730.91	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.374;DP=497;FS=0.000;HRun=0;HaplotypeScore=136.9867;InbreedingCoeff=0.9220;MQ=68.12;MQ0=0;MQRankSum=0.709;QD=16.61;ReadPosRankSum=1.194;VQSLOD=5.6409;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:31.83:0,32,201	0/0:5,0:5:12.04:0,12,165	0/0:9,0:9:24:0,24,293	0/0:21,0:21:43.94:0,44,650	0/0:14,0:14:33.02:0,33,417	0/0:9,0:9:21.07:0,21,294	0/0:34,0:34:90.30:0,90,1247	0/0:21,0:21:51.95:0,52,313	0/0:15,0:15:38.74:0,39,250	1/1:9,10:19:5.50:329,5,0	1/1:1,7:8:20.53:244,21,0	0/0:27,0:27:67.47:0,67,419	0/0:23,0:23:62.55:0,63,428	0/0:25,0:25:72.16:0,72,951	0/0:18,0:18:45.15:0,45,620	0/0:12,0:12:36.12:0,36,499	0/0:16,0:16:39.13:0,39,537	0/0:15,0:15:44.10:0,44,273	0/0:18,0:18:37.45:0,37,657	0/0:15,0:15:32.96:0,33,398	0/0:42,0:42:99:0,105,1366	0/0:16,0:16:37.86:0,38,226	0/0:17,0:17:36.81:0,37,222	0/0:24,0:24:59.50:0,59,420	1/1:5,12:17:27.76:291,28,0	0/0:21,0:21:63.21:0,63,868	0/0:18,0:18:54.18:0,54,748	0/0:3,0:3:9.03:0,9,114
chr10	74264966	.	AGTGTGTGTGT	A	2811.01	PASS	AB=0.755;AC=15;AF=0.268;AN=56;BaseQRankSum=8.391;DP=658;FS=0.618;HRun=0;HaplotypeScore=200.0110;InbreedingCoeff=0.6309;MQ=63.10;MQ0=8;MQRankSum=-8.090;QD=12.95;ReadPosRankSum=3.328;VQSLOD=2.6991;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,22:42:5.71:129,6,0	0/0:10,0:12:30.09:0,30,1157	0/0:27,0:18:6.02:0,6,138	0/0:28,0:19:18.06:0,18,579	0/0:21,0:21:39.13:0,39,1727	0/0:19,0:19:36.11:0,36,1425	0/0:21,0:23:30.10:0,30,1305	0/1:20,0:21:28.52:46,0,29	1/1:6,20:28:30.02:903,30,0	0/0:24,0:26:45.15:0,45,1765	0/0:15,0:15:24.08:0,24,1031	1/1:15,10:25:12.04:362,12,0	0/1:8,10:20:42.29:728,0,42	0/0:14,0:16:18.06:0,18,743	0/0:24,0:26:45.15:0,45,1934	0/0:19,0:18:39.13:0,39,1848	0/0:27,0:29:69.24:0,69,3056	0/1:16,0:26:29.04:104,0,29	0/0:25,0:27:47.18:0,47,1542	0/0:18,0:19:36.12:0,36,1407	0/0:35,0:35:51.65:0,52,2010	1/1:7,4:12:9.03:199,9,0	1/1:7,1:10:3.01:70,3,0	1/1:18,13:31:17.84:451,18,0	0/0:19,0:22:51.65:0,52,1942	0/0:22,0:26:58.43:0,58,2143	0/0:24,0:29:48.16:0,48,2115	0/0:15,0:18:48.16:0,48,2186
chr10	74265767	.	GTTC	G	11873.17	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=16.167;DP=767;FS=2.431;HRun=0;HaplotypeScore=120.9718;InbreedingCoeff=0.9649;MQ=67.10;MQ0=2;MQRankSum=-2.966;QD=43.97;ReadPosRankSum=2.001;VQSLOD=6.7306;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,52:52:99:2067,123,0	0/0:10,0:10:30.10:0,30,682	0/0:45,0:37:99:0,111,2384	0/0:33,0:28:77.10:0,77,1606	0/0:22,0:22:66.23:0,66,1561	0/0:22,0:22:66.19:0,66,1454	0/0:25,0:25:75.26:0,75,1772	1/1:0,36:34:99:1724,102,0	1/1:1,28:29:75.21:1287,75,0	0/0:31,0:31:90.31:0,90,2090	0/0:19,0:19:57.20:0,57,1344	1/1:0,26:26:69.20:1184,69,0	1/1:3,25:28:4.35:1197,4,0	0/0:20,1:21:7.28:0,7,1295	0/0:28,0:28:84.27:0,84,1907	0/0:25,0:25:72.25:0,72,1703	0/0:20,0:20:54.19:0,54,1248	1/1:1,20:22:60.16:1003,60,0	0/0:19,0:17:48.16:0,48,1132	0/0:25,0:25:75.23:0,75,1723	0/0:51,0:51:99:0,147,3325	1/1:0,22:22:63.22:1108,63,0	1/1:0,18:18:48.16:845,48,0	1/1:2,35:37:66.31:1459,66,0	0/0:21,0:21:60.21:0,60,1416	0/0:31,0:31:93.32:0,93,2169	0/0:33,0:33:99:0,99,2265	0/0:16,0:16:48.16:0,48,1135
chr10	74268066	.	T	TG	1305.01	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=7.956;DP=558;FS=23.276;HRun=1;HaplotypeScore=64.9471;InbreedingCoeff=0.8720;MQ=93.42;MQ0=0;MQRankSum=-2.955;QD=23.30;ReadPosRankSum=0.918;VQSLOD=2.3022;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:93.24:0,93,1174	0/0:12,0:12:36.12:0,36,467	0/0:26,0:26:57.61:0,58,763	0/0:25,0:24:69.10:0,69,753	0/0:15,0:14:42.14:0,42,545	0/0:20,0:20:60.18:0,60,761	0/0:27,0:27:78.21:0,78,978	0/0:23,0:23:66.21:0,66,845	0/0:21,0:21:60.19:0,60,778	1/1:6,10:16:45.15:606,45,0	1/1:5,3:8:17.95:240,18,0	0/0:25,0:25:69.22:0,69,895	0/0:20,0:20:57.18:0,57,737	0/0:23,0:23:66.21:0,66,856	0/0:19,0:19:57.17:0,57,725	0/0:23,0:23:63.20:0,63,818	0/0:27,0:27:81.26:0,81,1052	0/0:26,0:26:72.20:0,72,894	0/0:18,0:18:51.15:0,51,647	0/0:10,0:10:29.99:0,30,367	0/0:34,0:34:99:0,99,1284	0/0:11,0:11:30.09:0,30,376	0/0:7,0:7:9.03:0,9,117	0/0:27,0:27:72.23:0,72,934	1/1:10,9:19:44.66:599,45,0	0/1:13,0:13:2.21:2,0,405	0/0:19,0:19:57.17:0,57,726	0/0:8,0:8:24.08:0,24,311
chr10	74268071	.	CG	C	1165.06	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.986;DP=552;FS=12.758;HRun=1;HaplotypeScore=62.6395;InbreedingCoeff=0.9406;MQ=91.41;MQ0=0;MQRankSum=-3.772;QD=29.13;ReadPosRankSum=1.123;VQSLOD=2.0964;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1671	0/0:11,0:11:33.11:0,33,524	0/0:24,0:24:72.18:0,72,1116	0/0:23,0:22:57.18:0,57,853	0/0:16,0:15:48.15:0,48,742	0/0:19,0:19:57.19:0,57,911	0/0:26,0:26:78.26:0,78,1229	0/0:25,0:25:75.24:0,75,1144	0/0:20,0:20:60.20:0,60,941	1/1:4,10:14:39.12:478,39,0	1/1:5,2:7:17.85:222,18,0	0/0:25,0:25:75.24:0,75,1161	0/0:19,0:19:54.18:0,54,855	0/0:24,0:24:72.23:0,72,1115	0/0:19,0:19:57.16:0,57,860	0/0:22,0:22:66.23:0,66,1054	0/0:27,0:27:81.27:0,81,1279	0/0:25,0:25:72.25:0,72,1141	0/0:17,0:17:51.17:0,51,812	0/0:9,0:9:27.09:0,27,426	0/0:36,0:36:99:0,108,1669	0/0:12,0:12:36.12:0,36,572	0/0:6,0:6:18.06:0,18,284	0/0:26,0:26:72.25:0,72,1138	1/1:11,8:19:48.13:607,48,0	0/0:14,0:14:3.81:0,4,561	0/0:21,0:21:63.21:0,63,998	0/0:8,0:8:24.08:0,24,383
chr10	74268517	.	G	GCTGTATGTATGTGTGCACCACCGGAC	7015.90	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.976;DP=596;FS=0.000;HRun=0;HaplotypeScore=359.0499;InbreedingCoeff=0.9653;MQ=87.00;MQ0=0;MQRankSum=-7.248;QD=116.93;ReadPosRankSum=0.093;VQSLOD=3.0471;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,114,6332	0/0:12,0:12:33.11:0,33,2307	0/0:21,0:21:60.19:0,60,2513	0/0:20,0:20:50.35:0,50,1978	0/0:23,0:23:63.22:0,63,3567	0/0:18,0:18:54.19:0,54,3183	0/0:22,0:22:66.23:0,66,3610	0/0:30,0:30:90.26:0,90,3807	0/0:17,0:17:48.16:0,48,2695	1/1:7,1:20:41.74:3373,42,0	1/1:3,2:13:9.03:884,9,0	0/0:30,0:30:84.27:0,84,4601	0/0:17,0:17:48.16:0,48,3041	0/0:17,0:17:45.15:0,45,2799	0/0:18,0:18:51.16:0,51,3003	0/0:19,0:19:57.20:0,57,3418	0/0:33,0:33:90.28:0,90,5503	0/0:10,0:9:27.09:0,27,1887	0/0:18,0:18:42.10:0,42,1740	0/0:27,0:27:78.22:0,78,4554	0/0:41,0:41:99:0,111,6607	0/0:12,0:12:33.10:0,33,1711	0/0:8,0:8:21.07:0,21,1165	0/0:32,0:32:93.32:0,93,6182	1/1:7,7:27:24.08:2759,24,0	0/0:26,0:26:75.26:0,75,4120	0/0:19,0:19:51.17:0,51,3060	0/0:4,0:4:12.04:0,12,599
chr10	74269674	.	AAAAC	A	384.72	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=2.861;DP=466;FS=0.000;HRun=0;HaplotypeScore=75.5768;InbreedingCoeff=0.4627;MQ=54.14;MQ0=96;MQRankSum=0.495;QD=8.02;ReadPosRankSum=1.512;VQSLOD=1.6064;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,4:24:61.61:478,62,0	0/0:5,0:4:6.82:0,7,43	0/0:28,0:7:17.90:0,18,138	0/0:22,0:4:8.55:0,9,55	0/0:21,0:12:32.82:0,33,334	0/0:19,0:16:39.84:0,40,372	0/0:8,0:6:17.92:0,18,210	0/0:30,0:26:66.54:0,67,523	0/1:12,0:9:2.89:3,0,131	0/0:24,0:14:30.49:0,30,193	0/0:16,0:13:19.74:0,20,131	0/0:15,0:12:26.90:0,27,215	0/1:10,0:10:4.94:5,0,105	0/0:9,0:4:12:0,12,131	0/0:9,0:7:17.93:0,18,217	0/0:11,0:8:21.37:0,21,179	0/0:26,0:22:57.94:0,58,677	0/0:20,0:16:32.91:0,33,267	0/0:23,0:19:56.17:0,56,464	0/0:14,0:10:23.19:0,23,219	0/0:6,0:5:12.46:0,12,130	0/0:5,0:5:14.86:0,15,106	0/0:21,0:18:50.43:0,50,359	0/0:12,0:10:20.91:0,21,167	0/0:19,0:14:28.05:0,28,178	0/0:24,0:18:48.31:0,48,466	0/0:10,0:7:20.05:0,20,212	0/0:21,0:6:13.69:0,14,100
chr10	74269716	.	C	CTT	9870.51	PASS	AB=0.883;AC=26;AF=0.464;AN=56;BaseQRankSum=-7.151;DP=412;FS=0.374;HRun=2;HaplotypeScore=51.0764;InbreedingCoeff=0.8443;MQ=83.83;MQ0=1;MQRankSum=-2.448;QD=42.92;ReadPosRankSum=1.728;VQSLOD=4.7071;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:63.22:1178,63,0	0/0:3,0:3:9.03:0,9,132	0/0:19,0:19:51.11:0,51,691	0/0:9,0:9:24.02:0,24,302	0/0:22,0:22:57.19:0,57,837	0/0:18,0:18:54.18:0,54,793	0/0:8,0:8:24.08:0,24,353	1/1:2,33:36:99:1727,102,0	1/1:1,10:11:30.06:525,30,0	1/1:0,18:18:50.84:955,51,0	1/1:0,11:12:30.10:561,30,0	1/1:0,13:14:33.11:618,33,0	1/1:1,20:21:42.14:786,42,0	0/0:7,0:7:21.07:0,21,309	0/0:6,0:6:18.06:0,18,265	0/1:8,1:9:29.11:29,0,326	0/0:18,0:18:48.13:0,48,683	1/1:0,18:18:45.15:836,45,0	0/0:22,0:22:66.19:0,66,918	0/0:11,0:11:30.09:0,30,422	0/0:18,0:18:48.16:0,48,706	1/1:0,7:8:21.07:393,21,0	1/1:1,19:20:54.19:1009,54,0	1/1:1,7:8:18.06:337,18,0	1/1:0,18:17:45.15:843,45,0	0/1:11,2:13:73.29:73,0,429	0/0:12,0:12:36.12:0,36,529	0/0:9,0:9:27.02:0,27,371
chr10	74271997	.	G	GA	8123.78	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-17.858;DP=734;FS=9.021;HRun=3;HaplotypeScore=70.4030;InbreedingCoeff=0.9969;MQ=76.84;MQ0=1;MQRankSum=-4.161;QD=36.27;ReadPosRankSum=1.312;VQSLOD=5.1935;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,1464	0/0:9,0:9:27.07:0,27,312	0/0:17,0:18:36.83:0,37,424	0/0:12,0:12:27.06:0,27,298	0/0:27,0:27:75.23:0,75,896	0/0:22,0:22:57.17:0,57,683	0/0:41,0:41:99:0,114,1356	1/1:5,28:33:84.26:1144,84,0	1/1:0,26:26:72.24:1007,72,0	0/0:29,0:29:81.24:0,81,961	0/0:21,0:21:60.18:0,60,711	1/1:2,29:31:81.27:1131,81,0	1/1:2,25:27:72.24:1008,72,0	0/0:36,0:36:99:0,102,1180	0/0:21,0:21:60.17:0,60,707	0/0:23,0:23:66.20:0,66,791	0/0:48,0:47:99:0,135,1578	1/1:0,25:25:66.19:904,66,0	0/0:18,0:18:51.14:0,51,593	0/0:18,0:18:48.15:0,48,576	0/0:52,0:52:99:0,150,1763	1/1:0,19:19:51.17:714,51,0	1/1:1,26:27:65.98:914,66,0	1/1:1,35:36:93.31:1302,93,0	0/0:13,0:13:30.08:0,30,349	0/0:27,0:27:78.23:0,78,927	0/0:26,0:26:78.23:0,78,923	0/0:5,0:5:15.05:0,15,180
chr10	74273140	.	AAG	A	2142.85	PASS	AB=0.917;AC=7;AF=0.125;AN=56;BaseQRankSum=9.682;DP=625;FS=14.817;HRun=0;HaplotypeScore=74.3780;InbreedingCoeff=0.8448;MQ=59.40;MQ0=2;MQRankSum=0.403;QD=30.61;ReadPosRankSum=-0.202;VQSLOD=4.2616;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1828	0/0:15,0:15:45.14:0,45,780	0/0:22,0:9:27.09:0,27,452	0/0:14,0:11:27.08:0,27,445	0/0:19,0:19:57.20:0,57,1026	0/0:14,0:14:39.12:0,39,647	0/0:23,0:23:66.23:0,66,1188	0/0:33,0:33:87.26:0,87,1441	0/0:26,0:26:78.24:0,78,1345	1/1:0,24:24:72.21:974,72,0	1/1:1,19:20:51.13:692,51,0	0/0:19,0:19:51.17:0,51,909	0/0:23,0:23:66.23:0,66,1185	0/0:19,0:19:54.19:0,54,972	0/0:30,0:30:84.29:0,84,1512	0/0:18,0:18:45.15:0,45,810	0/0:34,0:33:96.33:0,96,1718	0/0:37,0:37:87.30:0,87,1532	0/0:23,0:23:57.18:0,57,982	0/0:15,0:15:42.13:0,42,723	0/0:32,0:32:90.27:0,90,1561	0/0:23,0:23:63.20:0,63,1104	0/0:13,0:13:39.12:0,39,673	0/0:30,0:30:90.24:0,90,1544	1/1:1,14:15:45.14:613,45,0	0/1:10,1:11:11.92:12,0,456	0/0:23,0:23:63.22:0,63,1116	0/0:14,0:14:42.14:0,42,756
chr10	74274177	.	G	GA	3721.39	PASS	AB=0.923;AC=7;AF=0.125;AN=56;BaseQRankSum=-10.358;DP=657;FS=1.426;HRun=1;HaplotypeScore=60.4050;InbreedingCoeff=0.8412;MQ=92.01;MQ0=0;MQRankSum=-2.489;QD=39.59;ReadPosRankSum=-0.380;VQSLOD=3.9657;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1501	0/1:11,1:12:14.87:15,0,385	0/0:30,0:30:78.26:0,78,1078	0/0:23,0:23:60.18:0,60,799	0/0:32,0:32:96.32:0,96,1342	0/0:20,0:20:60.20:0,60,838	0/0:24,0:24:69.23:0,69,965	0/0:22,0:22:66.22:0,66,923	0/0:13,0:13:39.13:0,39,546	1/1:0,30:30:87.28:1357,87,0	1/1:0,28:28:81.28:1294,81,0	0/0:16,0:16:48.16:0,48,671	0/0:17,0:17:51.17:0,51,713	0/0:31,0:31:90.30:0,90,1257	0/0:19,0:19:57.16:0,57,776	0/0:23,0:23:69.23:0,69,965	0/0:25,0:25:75.25:0,75,1049	0/0:18,0:18:54.18:0,54,749	0/0:15,0:15:45.14:0,45,613	0/0:34,0:34:99:0,102,1424	0/0:24,0:24:72.23:0,72,989	0/0:23,0:23:69.23:0,69,965	0/0:32,0:32:96.32:0,96,1334	0/0:22,0:22:63.21:0,63,881	1/1:0,24:24:66.23:1055,66,0	0/0:23,0:23:66.22:0,66,917	0/0:27,0:27:81.27:0,81,1126	0/0:14,0:14:42.13:0,42,570
chr10	74274646	.	CT	C	4105.92	PASS	AB=0.846;AC=25;AF=0.446;AN=56;BaseQRankSum=14.922;DP=686;FS=0.000;HRun=12;HaplotypeScore=99.7837;InbreedingCoeff=0.8799;MQ=71.02;MQ0=0;MQRankSum=-0.786;QD=11.90;ReadPosRankSum=2.760;VQSLOD=3.4812;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:51:83.98:242,84,0	0/0:13,0:13:30.04:0,30,294	0/0:14,0:15:12.36:0,12,140	0/1:9,2:10:27.66:30,0,28	0/0:27,0:27:72.89:0,73,675	0/0:21,0:21:48.04:0,48,469	0/0:17,2:19:1.45:0,1,364	1/1:8,30:40:90.65:679,91,0	1/1:5,20:25:44.09:347,44,0	1/1:5,0:24:38.69:112,39,0	1/1:5,0:20:31.30:95,31,0	1/1:5,21:26:62.73:488,63,0	1/1:3,17:20:41.81:323,42,0	0/0:25,0:26:36.63:0,37,519	0/0:28,0:27:48.97:0,49,614	0/0:28,0:28:69.60:0,70,696	0/0:33,0:33:46.99:0,47,591	1/1:5,24:29:65.72:511,66,0	0/0:23,0:24:56.95:0,57,562	0/0:22,1:24:31.08:0,31,369	0/0:19,0:19:42.54:0,43,420	1/1:5,16:22:43.80:326,44,0	1/1:5,22:27:26.19:387,26,0	1/1:6,29:35:6.81:480,7,0	1/1:4,2:15:20.23:88,20,0	0/0:26,1:30:31.65:0,32,537	0/0:25,0:25:56.98:0,57,539	0/0:9,0:9:21.02:0,21,202
chr10	74275448	.	T	TTTTC	1289.27	PASS	AB=0.892;AC=15;AF=0.268;AN=56;BaseQRankSum=-2.154;DP=473;FS=6.353;HRun=0;HaplotypeScore=101.5687;InbreedingCoeff=0.5922;MQ=59.09;MQ0=37;MQRankSum=-2.182;QD=8.37;ReadPosRankSum=-0.075;VQSLOD=1.7535;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:33:78.27:134,0,78	0/0:9,0:8:11.95:0,12,123	0/0:46,0:14:15.34:0,15,114	0/0:31,0:11:13.34:0,13,147	0/0:25,0:25:48.38:0,48,468	0/0:17,0:14:23.10:0,23,314	0/0:12,0:11:32.91:0,33,359	1/1:22,0:22:18.47:262,18,0	1/1:7,6:15:5.39:157,5,0	0/0:18,0:17:35.54:0,36,256	0/0:17,0:17:31.28:0,31,216	0/1:9,0:6:11.33:75,0,11	1/1:13,0:13:6.46:119,6,0	0/0:12,0:10:26.87:0,27,265	0/0:16,0:16:32.75:0,33,361	0/0:10,0:9:24.02:0,24,319	0/0:22,0:20:48.91:0,49,541	0/1:11,8:20:24.05:222,0,24	0/0:15,0:11:22.61:0,23,158	0/0:12,0:11:24.53:0,25,207	0/0:13,0:12:20.97:0,21,183	1/1:4,0:3:1.55:4,2,0	1/1:8,4:11:8.64:156,9,0	1/1:15,3:15:13.90:330,14,0	0/0:20,0:20:7.32:0,7,127	0/0:12,0:12:25.79:0,26,203	0/0:7,0:7:11.91:0,12,107	0/0:5,0:5:9.01:0,9,114
chr10	74275451	.	T	TTC	684.84	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-0.621;DP=488;FS=0.000;HRun=0;HaplotypeScore=82.1128;InbreedingCoeff=0.7214;MQ=55.20;MQ0=54;MQRankSum=3.527;QD=11.81;ReadPosRankSum=1.703;VQSLOD=3.4248;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:33:80.75:0,81,563	0/0:11,0:9:15.48:0,15,135	0/0:44,0:12:1.26:0,1,61	0/0:31,0:11:18.38:0,18,157	0/0:26,0:25:44.93:0,45,402	0/0:17,0:14:31.66:0,32,326	0/0:12,0:11:32.97:0,33,336	0/0:21,0:21:45.60:0,46,239	0/0:16,0:14:6.92:0,7,47	1/1:9,9:17:28.03:340,28,0	1/1:9,9:18:6.04:199,6,0	0/0:9,0:6:13.40:0,13,75	0/0:13,0:13:22.94:0,23,156	0/0:11,0:9:26.79:0,27,261	0/0:16,0:16:32.86:0,33,320	0/0:10,0:9:24.01:0,24,270	0/0:25,0:20:39.20:0,39,478	0/0:21,0:20:22.75:0,23,145	0/0:17,0:12:28.62:0,29,193	0/0:12,0:11:24.56:0,25,193	0/0:13,0:12:24.26:0,24,208	0/0:4,0:3:2.99:0,3,23	0/0:15,0:9:10.67:0,11,52	0/0:20,0:15:5.52:0,6,78	1/1:6,13:20:15.74:277,16,0	0/0:12,0:12:26.40:0,26,197	0/0:10,0:9:23.68:0,24,180	0/0:5,0:3:6.02:0,6,70
chr10	74275618	.	T	TGG	3525.49	PASS	AB=0.590;AC=22;AF=0.393;AN=56;BaseQRankSum=6.551;DP=488;FS=0.821;HRun=8;HaplotypeScore=74.4279;InbreedingCoeff=0.8590;MQ=67.59;MQ0=0;MQRankSum=0.340;QD=15.00;ReadPosRankSum=2.167;VQSLOD=1.0138;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:28:52.40:181,52,0	0/0:3,0:3:9.02:0,9,100	0/0:7,0:7:8.91:0,9,74	0/0:7,0:6:11.96:0,12,115	0/0:12,0:12:30.07:0,30,329	0/0:18,0:18:39.06:0,39,435	0/0:20,0:20:51.11:0,51,569	0/1:7,0:21:2.99:64,0,3	1/1:6,19:32:58.15:796,58,0	1/1:3,0:18:32.32:112,32,0	0/1:5,0:18:7.97:52,0,8	1/1:5,5:13:22.54:250,23,0	1/1:4,8:12:24.08:380,24,0	0/0:15,0:16:38.95:0,39,479	0/0:14,0:14:36.07:0,36,401	0/0:24,0:24:63.16:0,63,702	0/0:31,0:31:84.22:0,84,936	1/1:4,0:29:59.76:205,60,0	0/0:11,0:12:29.80:0,30,301	0/0:17,0:17:42.10:0,42,468	0/0:35,0:35:99:0,102,1125	1/1:7,6:14:21.03:305,21,0	1/1:2,6:11:23.05:303,23,0	1/1:6,21:31:56.16:827,56,0	1/1:0,0:7:14.97:51,15,0	0/0:20,0:20:39.03:0,39,426	0/0:11,0:11:24.05:0,24,264	0/0:6,0:6:15.03:0,15,167
chr10	74275781	.	G	GT	15120.32	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-12.819;DP=728;FS=2.307;HRun=0;HaplotypeScore=73.6254;InbreedingCoeff=0.9769;MQ=81.83;MQ0=0;MQRankSum=-1.855;QD=43.95;ReadPosRankSum=2.994;VQSLOD=5.3869;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,55:55:99:2481,157,0	0/0:11,0:11:30.10:0,30,419	0/0:24,0:25:69.14:0,69,877	0/0:17,0:17:42.12:0,42,562	0/0:23,0:23:57.19:0,57,791	0/0:22,0:22:63.21:0,63,881	0/0:31,0:31:93.28:0,93,1265	1/1:1,29:30:87.26:1342,87,0	1/1:0,26:26:78.27:1247,78,0	1/1:3,19:22:60.20:951,60,0	1/1:0,15:16:42.14:659,42,0	1/1:0,30:30:90.31:1439,90,0	1/1:1,23:25:69.24:1102,69,0	0/0:26,0:26:75.23:0,75,1031	0/0:18,0:18:54.18:0,54,755	0/0:26,0:26:78.25:0,78,1074	0/0:32,0:32:87.29:0,87,1216	1/1:2,32:34:87.30:1391,87,0	0/0:20,0:20:54.17:0,54,738	0/0:14,0:14:36.12:0,36,503	0/0:48,0:48:99:0,132,1826	1/1:0,22:22:57.19:911,57,0	1/1:1,22:23:60.20:959,60,0	1/1:0,35:35:96.33:1535,96,0	1/1:0,25:25:69.24:1103,69,0	0/0:32,2:34:3.35:0,3,1188	0/0:24,0:24:69.23:0,69,963	0/0:13,0:13:39.13:0,39,545
chr10	74277019	.	CA	C	948.49	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.906;DP=625;FS=16.368;HRun=4;HaplotypeScore=64.8480;InbreedingCoeff=0.9419;MQ=100.11;MQ0=1;MQRankSum=-3.522;QD=32.71;ReadPosRankSum=-0.152;VQSLOD=2.1269;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:87.27:1043,87,0	0/0:3,0:3:9.03:0,9,125	0/0:32,0:32:93.29:0,93,1260	0/0:36,0:36:82.29:0,82,1099	0/0:18,0:18:54.16:0,54,737	0/0:15,0:15:39.09:0,39,495	0/0:28,0:28:81.21:0,81,1079	0/0:25,0:25:75.24:0,75,1021	0/0:32,0:32:93.29:0,93,1270	0/0:18,0:18:42.09:0,42,550	0/0:14,0:14:39.13:0,39,546	0/0:37,0:37:99:0,105,1357	0/0:19,0:19:57.19:0,57,796	0/0:29,0:29:84.26:0,84,1130	0/0:26,0:26:78.25:0,78,1075	0/0:21,0:21:60.20:0,60,840	0/0:20,0:20:60.19:0,60,823	0/0:22,0:22:66.18:0,66,895	0/0:15,0:15:42.14:0,42,587	0/0:12,0:12:29.99:0,30,342	0/0:33,0:32:84.27:0,84,1160	0/0:18,0:18:45.15:0,45,629	0/0:9,0:9:27.09:0,27,378	0/0:38,0:38:99:0,111,1475	0/0:10,0:10:24.08:0,24,336	0/0:26,0:26:72.22:0,72,989	0/0:20,0:20:60.20:0,60,840	0/0:20,0:20:57.19:0,57,798
chr10	74277954	.	AG	A	4751.91	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.278;DP=613;FS=11.624;HRun=6;HaplotypeScore=62.8910;InbreedingCoeff=0.9996;MQ=81.81;MQ0=0;MQRankSum=-0.900;QD=28.12;ReadPosRankSum=2.445;VQSLOD=4.8486;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.25:0,81,1050	0/0:10,0:10:30.10:0,30,393	0/0:13,0:13:32.67:0,33,356	0/0:20,1:21:50.86:0,51,538	0/0:20,0:20:57.17:0,57,733	0/0:21,0:21:60.17:0,60,761	0/0:19,0:19:54.18:0,54,710	1/1:3,15:18:42.08:442,42,0	1/1:1,15:16:36.09:387,36,0	0/0:27,0:26:78.23:0,78,988	0/0:10,0:10:27.09:0,27,352	1/1:1,25:26:66.17:709,66,0	1/1:1,24:25:75.16:796,75,0	0/0:20,0:20:60.18:0,60,774	0/0:27,0:27:78.25:0,78,1026	0/0:25,1:26:36.97:0,37,822	0/0:32,0:32:78.23:0,78,998	1/1:0,17:17:51.13:548,51,0	0/0:17,0:17:45.14:0,45,582	0/0:21,0:21:60.19:0,60,787	0/0:37,0:37:99:0,99,1241	1/1:1,25:26:72.18:774,72,0	1/1:1,18:19:45.07:484,45,0	1/1:1,21:22:57.14:613,57,0	0/0:21,0:21:54.18:0,54,709	0/0:30,0:30:87.27:0,87,1128	0/0:32,0:32:90.29:0,90,1181	0/0:11,0:11:30.10:0,30,393
chr10	74279648	.	ACACG	A	1349.86	PASS	AB=1.000;AC=15;AF=0.288;AN=52;BaseQRankSum=6.599;DP=559;FS=10.532;HRun=0;HaplotypeScore=98.2661;InbreedingCoeff=0.3124;MQ=51.07;MQ0=17;MQRankSum=-1.292;QD=5.95;ReadPosRankSum=-0.434;VQSLOD=1.4543;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:3.03:0,3,25	0/0:11,0:11:29.85:0,30,508	0/0:29,0:8:17.95:0,18,205	0/1:49,0:18:38.54:39,0,235	0/1:17,0:17:0.29:0,0,723	0/0:17,0:16:45:0,45,896	0/0:11,0:10:20.03:0,20,399	0/1:25,0:24:99:145,0,170	1/1:1,10:11:9.03:169,9,0	0/1:23,0:22:96.27:96,0,468	0/1:12,0:12:89.97:90,0,160	1/1:3,8:11:11.71:180,12,0	1/1:8,0:8:20.98:218,21,0	0/0:21,0:21:60:0,60,1027	0/0:20,0:20:53.80:0,54,1070	0/0:13,0:13:5.05:0,5,615	0/0:26,0:26:56.95:0,57,1140	0/1:27,0:28:78.25:283,0,78	0/0:23,0:22:22.17:0,22,588	0/1:12,0:12:13.76:14,0,423	0/0:59,0:58:99:0,127,2380	./.	./.	1/1:3,28:31:14.73:283,15,0	0/0:20,1:21:20.95:0,21,247	0/0:18,0:17:45.11:0,45,866	0/0:16,0:15:41.92:0,42,577	0/0:11,0:10:26.90:0,27,405
chr10	74279652	.	GCACACACA	G	1277.46	PASS	AB=0.868;AC=9;AF=0.173;AN=52;BaseQRankSum=6.128;DP=541;FS=6.520;HRun=0;HaplotypeScore=128.3321;InbreedingCoeff=0.5431;MQ=52.12;MQ0=17;MQRankSum=-1.127;QD=11.83;ReadPosRankSum=-0.925;VQSLOD=2.0548;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:5.75:0,6,74	0/0:11,0:11:33.10:0,33,1038	0/0:26,0:5:15.05:0,15,379	0/0:48,0:17:47.71:0,48,746	0/0:17,0:17:45.11:0,45,1323	0/0:16,0:15:45.15:0,45,1470	0/0:11,0:10:20.55:0,21,641	0/1:8,15:22:10.52:460,0,11	0/1:11,0:11:0.47:0,0,1	0/0:19,0:18:48.13:0,48,1018	0/0:14,0:14:32.65:0,33,560	1/1:10,0:10:3.79:22,4,0	0/1:6,0:6:16.77:127,0,17	0/0:21,0:21:60.14:0,60,1634	0/0:19,0:19:45.62:0,46,1742	0/0:12,0:12:36.10:0,36,920	0/0:25,0:25:63.07:0,63,1952	1/1:24,3:28:9.33:772,9,0	0/0:22,0:21:1.33:0,1,962	0/0:13,0:13:39.08:0,39,794	0/0:59,0:58:99:0,147,4474	./.	./.	1/1:29,1:30:9.19:28,9,0	0/0:22,0:22:27.08:0,27,600	0/0:17,0:16:48.12:0,48,1344	0/0:15,0:14:42.10:0,42,982	0/0:12,0:11:29.97:0,30,667
chr10	74281075	.	AACACACACACACAC	A	3688.24	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=11.100;DP=621;FS=11.914;HRun=0;HaplotypeScore=236.4072;InbreedingCoeff=0.9813;MQ=57.85;MQ0=15;MQRankSum=-10.397;QD=22.77;ReadPosRankSum=-8.006;VQSLOD=-0.5964;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:16:21.07:0,21,811	0/0:6,0:9:21.07:0,21,1076	./.	0/0:31,0:15:14.70:0,15,283	0/0:19,0:19:51.17:0,51,3053	0/0:23,0:24:45.12:0,45,2383	0/0:15,0:19:45.09:0,45,2276	1/1:19,11:30:32.90:577,33,0	1/1:5,14:19:27:576,27,0	0/0:7,0:18:39.13:0,39,1856	0/0:12,0:26:52.15:0,52,2369	1/1:5,9:14:17.97:378,18,0	1/1:8,17:25:44.61:834,45,0	0/0:23,0:23:48.16:0,48,2456	0/0:19,0:21:51.16:0,51,3084	0/0:21,0:21:48.16:0,48,2980	0/0:33,0:36:84.27:0,84,4628	1/1:1,12:13:21.07:831,21,0	0/0:21,0:21:48.12:0,48,2198	0/0:27,0:27:63.19:0,63,3895	0/0:25,0:31:48.14:0,48,2274	1/1:7,13:20:26.70:179,27,0	1/1:4,16:20:32.60:269,33,0	1/1:9,11:21:8.18:44,8,0	0/0:5,0:22:54.19:0,54,2426	0/0:20,0:21:36.12:0,36,2241	0/0:28,0:31:54.19:0,54,3081	0/0:13,0:16:35.57:0,36,1959
chr10	74281957	.	T	TTGTG	1568.53	PASS	AB=1.000;AC=23;AF=0.442;AN=52;BaseQRankSum=3.880;DP=494;FS=13.603;HRun=0;HaplotypeScore=108.2668;InbreedingCoeff=0.6833;MQ=63.88;MQ0=17;MQRankSum=-4.661;QD=7.33;ReadPosRankSum=-5.211;VQSLOD=-0.4750;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:26.92:0,27,385	0/0:8,0:8:8.83:0,9,131	./.	./.	0/0:19,0:18:0.95:0,1,168	0/0:17,0:16:20.04:0,20,212	0/0:20,0:17:3.01:0,3,45	1/1:34,0:34:19.47:225,19,0	1/1:12,5:17:9.01:175,9,0	1/1:19,0:18:27.25:282,27,0	1/1:18,0:17:9:121,9,0	1/1:16,0:16:3.71:119,4,0	1/1:13,0:13:10.38:99,10,0	0/0:11,0:11:7.91:0,8,97	0/0:23,0:23:39.10:0,39,532	0/1:19,0:19:31.83:32,0,185	0/0:21,0:20:26.86:0,27,376	1/1:14,0:15:20.06:229,20,0	0/0:19,0:18:7.36:0,7,131	0/0:21,0:19:17.55:0,18,224	0/0:21,0:21:20.70:0,21,299	1/1:9,4:12:3.01:71,3,0	1/1:10,0:10:9.02:123,9,0	1/1:19,0:19:19.46:231,19,0	1/1:21,0:21:2.99:50,3,0	0/0:15,0:14:15.05:0,15,218	0/0:16,0:15:12:0,12,180	0/0:2,0:1:3.01:0,3,43
chr10	74281996	.	TGAGAGAGAGAGAGAGAGA	T	1082.32	PASS	AB=0.952;AC=7;AF=0.135;AN=52;BaseQRankSum=5.007;DP=435;FS=8.777;HRun=0;HaplotypeScore=200.5537;InbreedingCoeff=0.5016;MQ=45.82;MQ0=12;MQRankSum=-4.957;QD=14.24;ReadPosRankSum=-1.961;VQSLOD=1.4346;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:33.11:0,33,1382	0/0:5,0:5:12.04:0,12,634	./.	./.	0/0:19,0:26:21.39:0,21,1085	0/0:23,0:22:36.07:0,36,1799	0/0:20,0:18:1.34:0,1,124	0/0:19,0:19:21.07:0,21,727	0/0:19,0:18:19.73:0,20,1292	1/1:12,3:19:27.06:976,27,0	1/1:14,2:17:0.35:1,0,0	0/0:14,0:14:18.53:0,19,1154	0/0:13,0:13:16.87:0,17,1106	0/0:13,0:13:30.09:0,30,1474	0/0:23,0:23:24.08:0,24,1168	0/0:14,0:14:18.06:0,18,798	0/0:21,0:20:42.08:0,42,1898	0/0:13,0:15:27.09:0,27,957	0/0:11,0:11:21.06:0,21,942	0/0:12,0:12:13.86:0,14,558	0/0:20,0:20:33.11:0,33,1435	0/0:9,0:8:3.01:0,3,243	0/0:7,0:7:3.01:0,3,62	0/0:23,0:23:30.10:0,30,1902	1/1:12,3:17:3.01:129,3,0	0/1:19,0:19:91.47:91,0,2198	0/0:15,0:14:27.09:0,27,1235	0/0:6,0:4:9.03:0,9,421
chr10	74282855	.	CG	C	2365	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.726;DP=586;FS=2.782;HRun=3;HaplotypeScore=58.1692;InbreedingCoeff=0.9885;MQ=84.46;MQ0=0;MQRankSum=-1.122;QD=31.53;ReadPosRankSum=-0.101;VQSLOD=3.4408;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,1934	0/0:9,0:9:27.09:0,27,385	0/0:19,0:17:41.93:0,42,509	0/0:24,0:23:46.21:0,46,613	0/0:28,0:28:84.27:0,84,1180	0/0:23,0:23:63.20:0,63,886	0/0:21,0:21:60.15:0,60,838	0/0:21,0:21:60.15:0,60,819	0/0:13,0:13:39.13:0,39,558	1/1:0,26:26:78.15:905,78,0	1/1:4,15:19:51.08:600,51,0	0/0:24,0:24:72.23:0,72,1014	0/0:11,0:11:33.11:0,33,462	0/0:24,0:24:72.24:0,72,1029	0/0:21,0:21:63.21:0,63,905	0/0:16,0:16:48.12:0,48,666	0/0:37,0:37:99:0,111,1553	0/0:26,0:26:75.21:0,75,1031	0/0:25,0:25:69.17:0,69,942	0/0:20,0:20:54.15:0,54,734	0/0:17,0:17:51.13:0,51,695	0/0:17,0:17:48.16:0,48,675	0/0:11,0:11:33.10:0,33,456	0/0:18,0:18:54.17:0,54,753	1/1:0,30:30:81.25:1002,81,0	0/0:16,0:16:45.14:0,45,627	0/0:21,0:21:63.19:0,63,867	0/0:4,0:4:12.04:0,12,173
chr10	74283096	.	C	CGTAT	1053.53	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-3.628;DP=702;FS=5.597;HRun=0;HaplotypeScore=112.3759;InbreedingCoeff=0.5824;MQ=68.34;MQ0=2;MQRankSum=-0.745;QD=12.25;ReadPosRankSum=-0.900;VQSLOD=2.8955;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,33:58:5.29:1133,5,0	0/0:6,0:6:18.06:0,18,293	0/0:29,0:23:22.95:0,23,271	0/0:21,0:17:8.20:0,8,150	0/0:30,0:30:81.21:0,81,1220	0/0:23,0:23:57.05:0,57,772	0/1:28,0:28:2.39:2,0,724	0/0:30,0:30:42.09:0,42,536	0/0:27,0:27:66.23:0,66,1070	0/0:31,0:31:81.26:0,81,1253	0/0:30,0:30:72.14:0,72,1017	0/0:21,0:21:54.06:0,54,746	0/0:20,0:22:54.17:0,54,834	0/0:29,0:29:69.13:0,69,997	0/0:17,0:17:36.10:0,36,535	0/0:19,0:19:48.15:0,48,748	0/0:34,0:34:46.14:0,46,884	0/0:19,0:19:39.04:0,39,552	0/0:25,0:26:38.78:0,39,471	0/0:16,0:16:36.05:0,36,532	0/0:22,0:22:42.11:0,42,634	0/0:13,0:13:30.09:0,30,462	0/0:16,0:16:27.09:0,27,439	0/0:27,0:27:54.08:0,54,752	0/0:25,0:26:48.16:0,48,760	0/0:33,0:33:83.86:0,84,1249	0/0:37,0:36:87.28:0,87,1391	0/0:11,0:11:24.06:0,24,365
chr10	74283371	.	T	TA	1870.63	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=-7.844;DP=424;FS=0.000;HRun=7;HaplotypeScore=51.3858;InbreedingCoeff=0.7301;MQ=66.94;MQ0=1;MQRankSum=1.576;QD=22.27;ReadPosRankSum=-0.373;VQSLOD=2.9280;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:70.40:0,70,471	0/0:7,0:7:21.03:0,21,203	0/1:9,0:8:7.01:7,0,56	0/1:5,0:4:0.38:0,0,55	0/0:16,0:16:42.01:0,42,388	0/0:23,0:23:65.12:0,65,617	0/0:7,0:7:18.02:0,18,174	0/0:23,0:23:57.06:0,57,540	0/0:14,0:14:39.05:0,39,372	1/1:5,23:28:69.17:806,69,0	1/1:5,19:24:56.94:623,57,0	0/0:9,0:9:24:0,24,220	0/0:11,0:11:33.05:0,33,318	0/0:9,0:9:18.02:0,18,174	0/0:11,0:11:30.02:0,30,280	0/0:9,0:9:24:0,24,220	0/0:24,0:24:59.98:0,60,549	0/0:20,0:20:54.03:0,54,507	0/0:22,0:22:45.04:0,45,423	0/0:14,0:14:42.04:0,42,391	0/0:3,0:3:6.01:0,6,57	0/0:3,0:3:6.01:0,6,58	0/0:13,0:13:30.03:0,30,283	0/0:9,0:9:21.03:0,21,202	1/1:2,16:18:48.15:579,48,0	0/0:17,0:17:33.03:0,33,312	0/0:26,0:26:75.07:0,75,700	0/0:18,0:18:54.04:0,54,503
chr10	74283897	.	A	AT	3086.64	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=2.463;DP=508;FS=2.518;HRun=7;HaplotypeScore=61.4185;InbreedingCoeff=0.9912;MQ=70.19;MQ0=2;MQRankSum=-6.662;QD=30.26;ReadPosRankSum=-1.156;VQSLOD=3.7004;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.05:0,60,565	0/0:6,0:6:14.99:0,15,137	0/0:14,0:12:24.01:0,24,226	0/0:17,0:16:27.12:0,27,239	0/0:31,0:31:87.14:0,87,840	0/0:15,0:15:39.06:0,39,377	0/0:18,0:18:51.08:0,51,492	1/1:1,9:10:27.08:326,27,0	1/1:1,11:12:30.09:355,30,0	0/0:28,0:28:69.10:0,69,666	0/0:31,0:31:78.10:0,78,748	1/1:0,7:7:21.06:253,21,0	1/1:0,14:14:39.12:471,39,0	0/0:9,0:9:27.04:0,27,261	0/0:11,0:11:24.03:0,24,232	0/0:18,0:18:45.07:0,45,435	0/0:36,0:36:99:0,102,978	1/1:0,8:6:18.06:217,18,0	0/0:18,1:19:14.85:0,15,422	0/0:25,0:25:75.11:0,75,719	0/0:15,0:15:42.04:0,42,394	1/1:1,12:13:39.12:467,39,0	1/1:0,22:22:63.15:734,63,0	1/1:1,15:16:39.12:471,39,0	0/0:19,0:19:51.05:0,51,486	0/0:24,0:24:69.11:0,69,666	0/0:25,0:25:72.10:0,72,695	0/0:22,0:22:66.10:0,66,637
chr10	74284966	.	TC	T	2981.32	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.144;DP=709;FS=1.407;HRun=3;HaplotypeScore=67.3326;InbreedingCoeff=0.9998;MQ=89.05;MQ0=0;MQRankSum=-2.381;QD=33.50;ReadPosRankSum=3.019;VQSLOD=4.2787;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:51.14:0,51,706	0/0:11,0:11:33.11:0,33,475	0/0:24,0:24:69.09:0,69,883	0/0:28,0:28:75.23:0,75,1058	0/0:35,0:35:99:0,102,1371	0/0:33,0:33:99:0,99,1420	0/0:21,0:21:63.19:0,63,888	0/0:40,0:40:99:0,120,1645	0/0:35,0:35:99:0,102,1464	1/1:1,34:35:99:1264,102,0	1/1:0,24:24:72.23:893,72,0	0/0:27,0:27:81.23:0,81,1141	0/0:22,0:22:66.16:0,66,874	0/0:23,0:23:69.22:0,69,975	0/0:28,0:28:84.27:0,84,1184	0/0:20,0:20:60.19:0,60,847	0/0:14,0:14:36.12:0,36,517	0/0:15,0:15:45.15:0,45,648	0/0:15,0:15:39.13:0,39,561	0/0:33,0:33:99:0,99,1382	0/0:20,0:20:60.19:0,60,846	0/0:35,0:35:99:0,102,1452	0/0:17,0:17:45.15:0,45,647	0/0:19,0:19:51.17:0,51,729	1/1:0,30:30:78.25:967,78,0	0/0:31,1:31:59.12:0,59,1286	0/0:36,0:36:99:0,105,1474	0/0:15,0:15:45.15:0,45,647
chr10	74285363	.	TAGACAGAC	T	5428.47	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=10.728;DP=767;FS=0.000;HRun=0;HaplotypeScore=205.5679;InbreedingCoeff=0.9661;MQ=59.32;MQ0=5;MQRankSum=-10.583;QD=22.43;ReadPosRankSum=-3.272;VQSLOD=3.5524;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:41:17.85:334,18,0	0/0:14,0:14:23.75:0,24,780	0/0:28,0:23:12.14:0,12,279	0/0:35,0:33:24.06:0,24,564	0/0:20,0:20:36.10:0,36,1284	0/0:27,0:27:48.16:0,48,1957	0/0:21,0:21:45.15:0,45,1816	1/1:17,18:34:53.67:538,54,0	1/1:9,14:23:36.12:905,36,0	0/0:15,0:33:56.99:0,57,523	0/0:14,0:30:38.96:0,39,345	1/1:7,15:22:33.05:776,33,0	1/1:17,23:40:38.71:980,39,0	0/0:31,0:32:72.23:0,72,2844	0/0:30,0:30:63.22:0,63,2554	0/0:37,0:37:75.22:0,75,2750	0/0:17,0:17:45.14:0,45,1688	1/1:11,3:14:11.92:228,12,0	0/0:27,0:25:39.09:0,39,1418	0/0:31,0:31:66.21:0,66,2567	0/0:40,0:40:69.22:0,69,2687	1/1:8,15:23:39.13:986,39,0	1/1:10,11:21:21.07:531,21,0	1/1:7,16:23:5.28:151,5,0	0/0:10,0:20:15.45:0,15,124	0/0:41,0:42:87.28:0,87,3270	0/0:30,0:30:69.24:0,69,2632	0/0:11,0:11:24.08:0,24,974
chr10	74286618	.	GT	G	1318.58	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.344;DP=356;FS=5.949;HRun=9;HaplotypeScore=34.3374;InbreedingCoeff=0.9292;MQ=55.01;MQ0=21;MQRankSum=3.356;QD=17.35;ReadPosRankSum=2.932;VQSLOD=3.1456;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:54.03:494,54,0	0/0:6,0:6:15.02:0,15,156	0/0:7,0:3:5.98:0,6,56	0/0:7,0:2:0:0,0,0	0/0:15,0:15:32.93:0,33,360	0/0:9,0:9:21.06:0,21,242	0/0:10,0:9:18.01:0,18,193	0/0:12,0:14:35.80:0,36,373	1/1:3,5:7:15.48:138,15,0	0/0:15,0:13:36.10:0,36,412	0/0:16,0:14:42.12:0,42,485	1/1:1,6:7:18.01:165,18,0	1/1:2,6:8:18.01:165,18,0	0/0:11,0:11:30.09:0,30,344	0/0:6,0:6:12.04:0,12,139	0/0:7,0:7:21.06:0,21,242	0/0:18,0:19:50.94:0,51,554	0/0:25,0:21:45.12:0,45,509	0/0:12,0:8:17.99:0,18,180	0/0:13,0:12:30.09:0,30,346	0/0:22,0:21:54.15:0,54,615	1/1:4,9:12:18:165,18,0	1/1:0,6:6:15.01:137,15,0	1/1:1,12:12:27.01:247,27,0	0/0:16,0:14:40.67:0,41,453	0/0:12,0:10:27.05:0,27,299	0/0:17,0:16:33.10:0,33,381	0/0:19,0:19:57.04:0,57,639
chr10	74288854	.	AATT	A	292.25	PASS	AB=0.900;AC=9;AF=0.237;AN=38;BaseQRankSum=2.821;DP=255;FS=0.000;HRun=0;HaplotypeScore=38.6455;InbreedingCoeff=0.4452;MQ=82.18;MQ0=1;MQRankSum=-0.054;QD=4.79;ReadPosRankSum=0.076;VQSLOD=1.3550;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:2.98:21,3,0	0/0:7,0:7:9.02:0,9,100	./.	./.	0/0:6,0:7:3.01:0,3,39	0/0:5,0:6:3.01:0,3,39	./.	./.	./.	1/1:11,4:15:12.04:157,12,0	0/0:7,0:7:9.03:0,9,156	./.	0/0:6,0:8:6.02:0,6,78	0/0:5,0:7:6.02:0,6,78	0/0:9,0:9:9.03:0,9,158	0/0:8,0:8:3.01:0,3,44	0/0:15,0:16:18.06:0,18,312	1/1:12,0:17:5.95:42,6,0	0/0:6,0:6:6.02:0,6,114	0/0:8,0:8:3.01:0,3,57	0/0:10,0:10:6.02:0,6,114	./.	./.	0/0:6,0:8:6.02:0,6,78	1/1:5,5:11:15.01:178,15,0	./.	0/0:13,0:12:12.04:0,12,228	0/1:8,1:9:21.08:21,0,260
chr10	74290376	.	T	TA	2997.61	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-7.831;DP=645;FS=4.960;HRun=9;HaplotypeScore=63.3111;InbreedingCoeff=0.9895;MQ=81.04;MQ0=0;MQRankSum=-1.632;QD=22.20;ReadPosRankSum=1.354;VQSLOD=4.6727;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:68.97:0,69,599	0/0:10,0:10:23.98:0,24,206	0/0:24,0:24:42.52:0,43,357	0/0:12,0:13:23.36:0,23,175	0/0:23,0:23:59.95:0,60,516	0/0:25,0:25:74.97:0,75,649	0/0:22,0:22:62.97:0,63,543	0/0:33,0:33:71.95:0,72,619	1/1:6,8:14:13.90:180,14,0	0/0:36,0:36:92.93:0,93,797	0/0:27,0:27:63.94:0,64,588	1/1:6,18:24:51.12:554,51,0	1/1:7,24:31:69.17:755,69,0	0/0:31,0:31:77.96:0,78,673	0/0:22,0:22:47.98:0,48,417	0/0:16,0:16:41.99:0,42,365	0/0:19,1:20:12.80:0,13,327	0/0:19,0:19:44.98:0,45,390	0/0:25,0:25:71.95:0,72,619	0/0:22,0:22:56.98:0,57,494	0/0:26,0:26:68.95:0,69,593	1/1:3,27:30:75.12:813,75,0	1/1:3,19:22:50.62:550,51,0	1/1:3,11:14:30.08:332,30,0	0/0:24,0:24:65.97:0,66,572	0/0:22,0:21:44.94:0,45,385	0/0:33,0:33:77.93:0,78,672	0/0:12,0:12:32.99:0,33,286
chr10	74291179	.	T	TTATC	1863.58	PASS	AB=1.000;AC=8;AF=0.148;AN=54;BaseQRankSum=-4.410;DP=611;FS=5.988;HRun=0;HaplotypeScore=108.7248;InbreedingCoeff=0.6328;MQ=72.48;MQ0=2;MQRankSum=0.509;QD=21.18;ReadPosRankSum=-0.526;VQSLOD=3.0047;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,6:19:24.07:496,24,0	0/0:10,0:10:21.07:0,21,328	0/0:34,0:26:2.94:0,3,18	0/0:18,0:14:5.74:0,6,37	0/0:18,0:21:21.03:0,21,247	0/0:20,0:20:36.07:0,36,494	0/0:19,0:20:4.92:0,5,252	./.	0/0:20,0:19:39.12:0,39,580	0/0:25,0:25:39.06:0,39,508	0/0:22,0:22:21.06:0,21,301	0/0:21,0:21:48.16:0,48,737	0/0:19,0:19:30.07:0,30,424	1/1:10,17:26:39.13:901,39,0	0/0:26,0:26:51.15:0,51,737	0/0:18,0:20:48.13:0,48,669	0/0:16,0:16:30.05:0,30,422	0/1:7,0:11:7.55:8,0,105	0/0:23,0:24:27.08:0,27,402	0/0:33,0:33:60.09:0,60,748	0/0:32,0:32:44.98:0,45,605	0/0:13,0:24:42.04:0,42,399	1/1:10,3:15:24.07:476,24,0	0/0:18,0:18:32.90:0,33,417	0/0:21,0:21:33.09:0,33,474	0/0:19,0:19:33.11:0,33,507	0/0:33,0:32:66.13:0,66,889	0/1:16,0:16:99:131,0,341
chr10	74291492	.	AACAC	A	3014.15	PASS	AB=0.777;AC=14;AF=0.250;AN=56;BaseQRankSum=4.644;DP=704;FS=0.478;HRun=0;HaplotypeScore=129.7739;InbreedingCoeff=0.6036;MQ=70.61;MQ0=7;MQRankSum=0.791;QD=13.46;ReadPosRankSum=2.998;VQSLOD=3.1988;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:27:65.58:69,0,66	0/0:7,0:11:23.29:0,23,392	0/0:28,0:19:6.02:0,6,84	0/0:35,0:21:3:0,3,28	0/0:20,0:21:26.78:0,27,479	0/0:30,0:33:40.52:0,41,1097	0/0:21,0:21:29.84:0,30,559	0/0:36,0:36:34.18:0,34,531	1/1:11,12:24:42.13:637,42,0	0/0:15,0:28:52.47:0,52,799	0/0:22,0:27:35.97:0,36,622	1/1:7,16:26:13.64:622,14,0	1/1:11,12:24:36.11:543,36,0	0/0:16,0:17:26.81:0,27,537	0/0:22,0:26:31.72:0,32,1035	0/1:28,0:31:20.56:21,0,912	0/0:26,0:26:54.16:0,54,1176	0/0:7,0:18:21.20:0,21,304	0/1:16,0:17:25.19:25,0,326	0/0:24,0:30:44.79:0,45,757	0/0:33,1:36:24.89:0,25,1312	1/1:14,15:30:17.81:376,18,0	1/1:3,10:13:15.05:240,15,0	0/1:7,19:32:3.20:664,0,3	0/0:10,0:27:33.11:0,33,616	0/0:25,0:26:40.58:0,41,745	0/0:19,0:21:29.82:0,30,561	0/0:11,0:12:24.29:0,24,515
chr10	74291948	.	T	TAAA	3016.87	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=4.606;DP=600;FS=17.829;HRun=13;HaplotypeScore=98.2059;InbreedingCoeff=0.9543;MQ=67.74;MQ0=0;MQRankSum=-5.632;QD=15.01;ReadPosRankSum=-3.075;VQSLOD=-0.0896;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:46:50.14:0,50,809	0/0:8,0:8:15.46:0,15,162	0/0:26,0:19:13.87:0,14,108	0/0:18,0:15:24.40:0,24,188	0/0:26,0:30:27.57:0,28,501	0/0:22,0:22:28.94:0,29,485	0/0:19,0:21:43.25:0,43,443	1/1:8,1:24:57.08:544,57,0	1/1:16,1:17:32.91:327,33,0	1/1:6,12:22:44.93:505,45,0	1/1:6,8:17:19.15:176,19,0	1/1:5,0:20:8.99:105,9,0	1/1:5,0:13:17.97:222,18,0	0/0:21,0:21:34.05:0,34,367	0/0:11,0:11:23.44:0,23,228	0/0:24,0:25:42.57:0,43,434	0/0:29,0:32:61.05:0,61,640	1/1:5,0:15:6.49:86,6,0	0/0:25,0:28:24.24:0,24,430	0/0:15,0:17:34.46:0,34,368	0/0:15,0:15:26.62:0,27,276	1/1:4,2:14:18.95:283,19,0	1/1:3,7:13:15.01:202,15,0	1/1:6,0:17:7.43:89,7,0	1/1:3,18:27:51.02:698,51,0	0/0:26,0:28:49.09:0,49,524	0/0:22,0:23:31.35:0,31,353	0/0:27,0:27:38.51:0,39,419
chr10	74293815	.	ACAG	A	325.74	PASS	AB=0.919;AC=5;AF=0.093;AN=54;BaseQRankSum=7.330;DP=749;FS=9.987;HRun=0;HaplotypeScore=103.1174;InbreedingCoeff=0.1741;MQ=53.51;MQ0=40;MQRankSum=-6.628;QD=4.72;ReadPosRankSum=-1.392;VQSLOD=1.0327;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:41:96.22:0,96,1946	0/0:8,0:8:23.54:0,24,256	1/1:2,0:1:2.04:6,2,0	./.	0/0:20,0:18:44.91:0,45,888	0/0:20,0:16:45.12:0,45,911	0/0:36,0:34:96.23:0,96,1871	0/0:44,0:33:89.90:0,90,1529	0/0:28,0:27:75.16:0,75,1414	0/1:26,4:27:99:211,0,349	0/1:16,0:12:30.82:31,0,147	0/0:31,0:31:87.20:0,87,1639	0/0:28,0:28:81.19:0,81,1557	0/0:30,0:29:84.26:0,84,1768	0/0:29,0:29:87.27:0,87,1886	0/0:33,0:33:96.25:0,96,1933	0/0:32,0:31:89.59:0,90,1784	0/0:29,0:29:87.16:0,87,1670	0/0:18,0:16:48.04:0,48,823	0/0:17,0:16:45.03:0,45,864	0/0:59,0:54:99:0,126,2450	0/0:21,0:15:38.06:0,38,712	0/0:22,0:20:40.30:0,40,812	0/0:47,0:47:99:0,135,2732	0/1:18,3:16:99:183,0,102	0/0:33,0:30:84.18:0,84,1672	0/0:36,0:36:99:0,108,2229	0/0:14,0:14:35.86:0,36,710
chr10	74293824	.	ACAG	A	735.27	PASS	AB=0.915;AC=4;AF=0.071;AN=56;BaseQRankSum=6.942;DP=756;FS=59.974;HRun=0;HaplotypeScore=99.6578;InbreedingCoeff=0.3483;MQ=53.64;MQ0=38;MQRankSum=-1.684;QD=10.97;ReadPosRankSum=-1.696;VQSLOD=0.7306;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:43:79.02:0,79,1707	0/0:12,0:12:32.32:0,32,585	0/0:5,0:2:4.17:0,4,20	0/0:8,0:2:5.74:0,6,36	0/0:21,0:18:48.05:0,48,884	0/0:20,0:17:45.07:0,45,919	0/0:36,0:34:96.24:0,96,1886	0/0:40,0:32:96.12:0,96,1478	0/0:25,0:24:66.16:0,66,1257	0/1:23,4:22:16.77:336,0,17	1/1:15,1:12:7.30:235,7,0	0/0:29,0:29:81.24:0,81,1705	0/0:27,0:27:81.18:0,81,1610	0/0:30,0:30:81.12:0,81,1605	0/0:33,0:33:96.27:0,96,1989	0/0:35,0:35:99:0,102,2068	0/0:32,0:31:85.93:0,86,1901	0/0:30,0:29:84.09:0,84,1547	0/0:17,0:15:48.12:0,48,929	0/0:18,0:17:45.14:0,45,939	0/0:55,0:50:99:0,127,2164	0/0:24,0:18:50.85:0,51,719	0/0:18,0:16:36.08:0,36,689	0/0:45,0:45:99:0,123,2560	0/1:23,1:20:96.34:272,0,96	0/0:33,0:30:90.27:0,90,1865	0/0:38,0:38:99:0,108,2260	0/0:12,0:12:36.05:0,36,678
chr10	74293857	.	GCAA	G	2161.86	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.744;DP=860;FS=0.504;HRun=0;HaplotypeScore=119.5703;InbreedingCoeff=0.9985;MQ=58.30;MQ0=10;MQRankSum=-4.315;QD=28.82;ReadPosRankSum=-2.160;VQSLOD=3.5245;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:96.13:0,96,1874	0/0:15,0:15:36.11:0,36,697	0/0:30,0:18:34.93:0,35,760	0/0:28,0:21:60.18:0,60,1147	0/0:41,0:41:99:0,111,2226	0/0:23,0:23:60.21:0,60,1226	0/0:25,1:26:21.36:0,21,1139	0/0:39,0:39:99:0,102,1950	0/0:24,0:23:66.21:0,66,1302	1/1:7,27:33:84.71:1181,85,0	1/1:1,18:18:41.96:487,42,0	0/0:33,0:33:81.25:0,81,1582	0/0:26,0:26:72.25:0,72,1474	0/0:35,1:36:54.46:0,54,1728	0/0:31,0:31:77.66:0,78,1587	0/0:29,0:29:75.26:0,75,1532	0/0:31,0:30:78.22:0,78,1496	0/0:24,0:23:63.22:0,63,1291	0/0:26,0:24:54.18:0,54,1075	0/0:43,0:43:99:0,120,2384	0/0:46,0:45:90.26:0,90,1744	0/0:35,1:36:48.49:0,48,1796	0/0:28,0:26:72.23:0,72,1450	0/0:33,0:33:78.27:0,78,1629	1/1:2,20:21:50.96:637,51,0	0/0:38,0:38:93.31:0,93,1874	0/0:34,0:34:87.30:0,87,1788	0/0:19,0:19:54.19:0,54,1128
chr10	74294294	.	CTGTGTGTGTGTG	C	2004.94	PASS	AB=1.000;AC=11;AF=0.212;AN=52;BaseQRankSum=7.600;DP=569;FS=11.107;HRun=0;HaplotypeScore=176.5575;InbreedingCoeff=0.8079;MQ=60.62;MQ0=15;MQRankSum=-6.663;QD=20.05;ReadPosRankSum=-0.033;VQSLOD=1.8249;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:29:36.11:0,36,1446	0/0:10,0:10:21.07:0,21,984	./.	./.	0/0:24,0:24:27.08:0,27,1037	0/0:16,0:16:23.39:0,23,954	0/0:19,0:21:8.36:0,8,414	0/0:38,0:36:26.98:0,27,465	1/1:8,2:9:3.01:103,3,0	0/0:23,0:22:30.09:0,30,788	0/0:22,0:22:30.07:0,30,804	1/1:8,7:15:14.94:395,15,0	1/1:8,13:22:27.56:833,28,0	0/0:19,0:19:27.05:0,27,1071	0/0:20,0:21:54.16:0,54,2412	0/0:15,0:16:18.05:0,18,724	0/0:22,0:23:40.38:0,40,1819	0/0:10,0:11:18.02:0,18,515	0/0:22,0:22:22.14:0,22,826	0/0:22,0:23:46.03:0,46,1821	0/0:39,0:37:51.15:0,51,1983	1/1:10,5:15:1.07:268,1,0	1/1:12,12:26:11.09:554,11,0	0/1:12,0:12:0:0,0,0	0/0:14,0:18:25.64:0,26,637	0/0:27,0:27:41.51:0,42,1353	0/0:12,0:12:21.02:0,21,719	0/0:8,0:8:6.02:0,6,195
chr10	74295773	.	G	GTACAACA	687.67	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.007;DP=726;FS=0.000;HRun=0;HaplotypeScore=157.9235;InbreedingCoeff=0.9352;MQ=79.02;MQ0=0;MQRankSum=-3.900;QD=18.59;ReadPosRankSum=-0.741;VQSLOD=2.9254;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,17:37:21.07:780,21,0	0/0:6,0:6:9.03:0,9,209	0/0:31,0:31:34.91:0,35,561	0/0:36,0:34:47.15:0,47,804	0/0:24,0:24:48.16:0,48,1006	0/0:24,0:24:51.06:0,51,930	0/0:27,0:27:69.05:0,69,1433	0/0:42,0:42:54.01:0,54,895	0/0:25,0:25:60.11:0,60,1202	0/0:26,0:26:45.13:0,45,976	0/0:19,0:19:45.12:0,45,931	0/0:27,0:27:63.11:0,63,1162	0/0:32,0:32:75.22:0,75,1648	0/0:20,0:20:57.15:0,57,1228	0/0:25,0:25:51.13:0,51,1090	0/0:18,0:18:42.11:0,42,884	0/0:29,0:29:66.16:0,66,1459	0/0:22,0:22:48.10:0,48,1055	0/0:30,0:30:48.06:0,48,907	0/0:21,0:21:51.18:0,51,1156	0/0:32,0:32:66.13:0,66,1317	0/0:14,0:14:19.88:0,20,402	0/0:19,0:19:45.11:0,45,930	0/0:40,0:40:96.25:0,96,1983	0/0:15,0:15:27.09:0,27,609	0/0:38,0:38:99:0,102,2041	0/0:30,0:30:68.99:0,69,1301	0/0:17,0:17:33.09:0,33,718
chr10	74296097	.	GCACACACACA	G	38.60	PASS	AB=0.838;AC=6;AF=0.111;AN=54;BaseQRankSum=3.288;DP=492;FS=0.000;HRun=0;HaplotypeScore=126.6180;InbreedingCoeff=0.5520;MQ=56.60;MQ0=37;MQRankSum=-0.480;QD=1.02;ReadPosRankSum=0.857;VQSLOD=2.1455;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:7:9.03:0,9,381	0/0:26,0:10:2.22:0,2,7	0/0:41,0:20:0.47:0,0,1	0/0:19,0:18:23.56:0,24,639	0/0:18,0:17:23.42:0,23,621	0/0:24,0:20:15.51:0,16,399	0/0:14,0:13:12.04:0,12,314	0/0:9,0:7:5.92:0,6,140	1/1:11,0:10:6.47:98,6,0	0/1:7,0:7:0:0,0,0	0/0:16,0:16:21.07:0,21,737	0/0:16,0:15:12.09:0,12,378	0/0:18,0:16:18.02:0,18,514	0/0:10,0:10:18.06:0,18,667	0/0:7,0:6:6.02:0,6,237	0/0:31,0:29:33.11:0,33,1102	0/0:18,0:14:27.06:0,27,739	0/0:10,0:8:20.42:0,20,635	0/0:21,0:19:27.09:0,27,871	0/0:17,0:17:18.05:0,18,607	0/0:17,0:14:21.07:0,21,728	0/0:17,0:17:18.06:0,18,620	0/0:24,0:22:24.06:0,24,815	1/1:7,0:11:3.01:36,3,0	0/0:19,0:15:24.08:0,24,713	0/0:18,0:16:21.07:0,21,580	0/1:5,0:5:0.17:0,0,369
chr10	74296138	.	CAGAGAG	C	1210.65	PASS	AB=0.926;AC=22;AF=0.524;AN=42;BaseQRankSum=1.138;DP=483;FS=35.965;HRun=0;HaplotypeScore=116.3043;InbreedingCoeff=0.1858;MQ=42.71;MQ0=44;MQRankSum=1.766;QD=4.42;ReadPosRankSum=0.244;VQSLOD=0.4393;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:4:7.58:0,8,131	./.	./.	./.	0/0:24,0:23:3.80:0,4,61	0/1:18,0:13:0:0,0,0	0/0:14,0:13:3.59:0,4,10	1/1:16,0:12:5.85:43,6,0	1/1:9,0:10:3.01:42,3,0	0/1:13,0:15:0.11:0,0,0	0/1:21,0:21:7.08:98,0,7	0/1:13,0:12:46.52:47,0,66	0/0:17,0:15:11.55:0,12,78	1/1:12,0:8:3.01:58,3,0	0/1:14,0:13:44.44:44,0,51	0/1:29,0:23:20.41:20,0,162	0/0:18,0:18:1.36:0,1,3	1/1:14,0:15:9.03:158,9,0	./.	0/0:18,7:24:0:0,0,0	1/1:21,0:20:2.27:138,2,0	./.	1/1:25,0:21:18.38:201,18,0	0/1:5,0:11:0.01:0,0,0	1/1:22,0:23:18.06:268,18,0	0/1:17,0:15:3.94:216,0,4	./.
chr10	74296996	.	C	CAGT	3736.13	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.403;DP=726;FS=9.915;HRun=0;HaplotypeScore=114.9817;InbreedingCoeff=0.9616;MQ=93.06;MQ0=0;MQRankSum=-3.223;QD=51.89;ReadPosRankSum=-1.031;VQSLOD=5.4261;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,114,1827	0/0:9,0:9:24.05:0,24,359	0/0:33,0:33:84.25:0,84,1315	0/0:30,0:30:56.04:0,56,926	0/0:18,0:18:51.14:0,51,771	0/0:26,0:26:72.25:0,72,1157	0/0:28,0:28:78.25:0,78,1226	0/0:37,0:37:99:0,105,1644	0/0:27,0:27:75.24:0,75,1173	1/1:5,27:34:90.26:1887,90,0	1/1:4,9:13:21.07:463,21,0	0/0:25,0:25:72.25:0,72,1157	0/0:20,0:20:51.17:0,51,816	0/0:32,0:32:96.31:0,96,1505	0/0:38,0:38:99:0,111,1685	0/0:21,0:21:57.19:0,57,916	0/0:31,0:31:87.24:0,87,1308	0/0:16,0:16:48.14:0,48,746	0/0:33,0:33:87.26:0,87,1325	0/0:28,0:28:72.22:0,72,1106	0/0:33,0:33:84.74:0,85,1315	0/0:17,0:17:45.15:0,45,723	0/0:25,0:25:63.20:0,63,989	0/0:18,0:18:54.18:0,54,863	1/1:1,23:25:63.22:1386,63,0	0/0:37,0:37:99:0,108,1706	0/0:27,0:27:78.25:0,78,1230	0/0:2,0:2:6.02:0,6,96
chr10	74298042	.	AAAC	A	1064.70	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.963;DP=464;FS=4.301;HRun=0;HaplotypeScore=66.2258;InbreedingCoeff=0.8968;MQ=84.69;MQ0=0;MQRankSum=-3.200;QD=30.42;ReadPosRankSum=2.200;VQSLOD=3.5872;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.29:0,93,1947	0/0:1,0:1:3.01:0,3,66	0/0:34,0:29:66.61:0,67,1152	0/0:33,0:26:62.68:0,63,1241	0/0:15,0:15:42.13:0,42,868	0/0:13,0:13:39.13:0,39,859	0/0:18,0:18:51.14:0,51,1039	0/0:46,0:46:99:0,126,2617	0/0:5,0:5:12.04:0,12,265	1/1:0,12:10:30.10:482,30,0	1/1:3,13:16:30.10:482,30,0	0/0:14,0:14:33.11:0,33,686	0/0:9,0:9:24.07:0,24,478	0/0:6,0:6:15.03:0,15,289	0/0:15,0:15:45.15:0,45,993	0/0:13,0:13:36.12:0,36,782	0/0:30,0:30:81.19:0,81,1619	0/0:21,0:21:56.50:0,56,1108	0/0:15,0:15:42.14:0,42,891	0/0:5,0:5:15.05:0,15,331	0/0:24,0:24:72.23:0,72,1547	0/0:6,0:6:15.05:0,15,331	0/0:4,0:4:12.04:0,12,265	0/0:14,0:14:39.13:0,39,860	1/1:0,7:7:15.05:241,15,0	0/0:21,1:22:17.99:0,18,1246	0/0:23,0:23:69.24:0,69,1484	0/0:12,0:12:36.08:0,36,741
chr10	74298219	.	A	AAG	2263.95	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=3.480;DP=251;FS=0.000;HRun=0;HaplotypeScore=34.3578;InbreedingCoeff=0.8408;MQ=75.30;MQ0=0;MQRankSum=-1.985;QD=41.16;ReadPosRankSum=-0.670;VQSLOD=4.6114;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:21.03:0,21,285	0/0:4,0:4:12.04:0,12,177	0/0:5,0:5:13.27:0,13,154	0/0:6,0:6:15.02:0,15,199	0/0:17,0:17:51.16:0,51,732	0/0:13,0:13:39.07:0,39,531	0/0:5,0:5:15.05:0,15,221	1/1:2,18:19:48.16:888,48,0	1/1:0,2:3:6.02:112,6,0	0/0:14,0:14:39.12:0,39,543	0/0:6,0:6:18.06:0,18,258	1/1:0,2:2:6.02:112,6,0	1/1:1,7:8:21.07:392,21,0	0/0:7,0:7:21.07:0,21,309	0/0:10,0:10:30.10:0,30,440	0/0:4,0:4:12.03:0,12,157	0/0:20,0:20:54.18:0,54,795	1/1:2,10:12:33.11:607,33,0	0/0:22,0:22:66.18:0,66,930	0/0:5,0:5:15.05:0,15,221	0/0:2,0:2:3.01:0,3,44	1/1:0,2:3:3.01:56,3,0	1/1:1,5:6:11.88:225,12,0	1/1:0,1:1:3.01:56,3,0	0/0:13,0:13:39.13:0,39,572	0/0:5,0:5:15.05:0,15,221	0/0:17,0:17:48.15:0,48,687	0/0:13,0:13:36.12:0,36,530
chr10	74298292	.	A	ACT	231.52	PASS	AB=0.851;AC=10;AF=0.179;AN=56;BaseQRankSum=5.362;DP=371;FS=0.999;HRun=0;HaplotypeScore=76.2503;InbreedingCoeff=0.0080;MQ=72.04;MQ0=1;MQRankSum=-4.094;QD=2.39;ReadPosRankSum=-2.911;VQSLOD=1.2867;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,2:10:10.14:47,0,10	0/0:5,0:5:15.05:0,15,239	0/0:15,0:11:33.11:0,33,536	0/0:11,0:10:27.09:0,27,425	0/0:16,0:16:45.12:0,45,684	0/0:17,0:17:51.17:0,51,832	0/0:15,0:15:45.15:0,45,733	0/1:33,0:31:66.17:66,0,329	0/1:7,2:9:40.89:41,0,47	0/0:20,0:20:57.70:0,58,836	0/0:5,0:5:11.95:0,12,120	0/1:2,1:3:17.75:22,0,18	0/1:12,4:16:99:100,0,128	0/0:21,0:21:63.19:0,63,975	0/0:13,0:13:39.13:0,39,633	0/0:11,0:11:33.11:0,33,538	0/0:24,0:24:72.23:0,72,1150	0/1:6,1:7:30.51:31,0,57	0/0:15,0:14:42.14:0,42,683	0/0:8,0:8:24.08:0,24,389	0/0:11,0:11:27.09:0,27,440	1/1:4,1:5:5.90:42,6,0	0/1:8,1:9:8.76:9,0,84	0/1:4,1:5:17.75:18,0,29	0/0:21,0:21:53.23:0,53,594	0/0:17,0:17:51.16:0,51,789	0/0:22,0:21:60.19:0,60,953	0/0:7,0:7:21.07:0,21,342
chr10	74298293	.	A	ATACTACTACTAC	8060.77	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=3.860;DP=410;FS=5.255;HRun=0;HaplotypeScore=147.5141;InbreedingCoeff=0.8689;MQ=69.16;MQ0=1;MQRankSum=-8.239;QD=44.53;ReadPosRankSum=-5.143;VQSLOD=3.3119;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:17:18.06:943,18,0	0/0:5,0:5:12.04:0,12,360	0/0:15,0:11:9.03:0,9,303	0/0:11,0:10:3.01:0,3,83	0/0:16,0:16:21.06:0,21,555	0/0:17,0:17:36.12:0,36,1217	0/0:15,0:15:36.12:0,36,1217	1/1:46,0:40:45.15:1656,45,0	1/1:9,0:11:6.02:313,6,0	1/1:17,4:21:18.03:875,18,0	1/1:6,2:8:9.03:483,9,0	1/1:4,0:5:6.02:311,6,0	1/1:14,0:18:21.07:978,21,0	0/0:21,0:21:36.08:0,36,1083	0/0:12,0:13:18.06:0,18,550	0/0:11,0:11:27.09:0,27,933	0/0:23,0:23:51.14:0,51,1530	1/1:6,0:7:9:310,9,0	0/0:16,0:15:18.18:0,18,543	0/0:8,0:8:12.04:0,12,363	0/0:11,0:11:24.03:0,24,605	1/1:8,0:9:6.02:284,6,0	1/1:9,0:10:12.01:253,12,0	1/1:6,0:7:6.02:265,6,0	1/1:16,6:22:25.90:1390,26,0	0/0:17,0:17:39.12:0,39,1116	0/0:22,0:21:39.10:0,39,1188	0/0:8,0:8:12.02:0,12,335
chr10	74298510	.	C	CATAAA	11783.13	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-10.590;DP=577;FS=5.081;HRun=0;HaplotypeScore=95.9906;InbreedingCoeff=0.9870;MQ=64.44;MQ0=3;MQRankSum=-5.729;QD=53.80;ReadPosRankSum=-0.607;VQSLOD=4.7593;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,22:37:59.58:1770,60,0	0/0:9,0:9:21.04:0,21,348	0/0:20,0:19:36.59:0,37,683	0/0:19,0:15:14.05:0,14,241	0/0:14,0:14:39.13:0,39,743	0/0:21,0:21:60.21:0,60,1163	0/0:23,0:23:57.19:0,57,1098	1/1:17,16:34:69.19:1736,69,0	1/1:8,13:22:45.15:1282,45,0	0/0:31,0:31:69.20:0,69,1276	0/0:16,0:15:36.12:0,36,698	1/1:9,13:22:54.14:1322,54,0	1/1:9,17:25:54.18:1479,54,0	0/0:26,0:26:66.23:0,66,1262	0/0:18,0:18:48.15:0,48,889	0/0:16,0:16:42.13:0,42,773	0/0:17,0:17:36.12:0,36,668	1/1:5,15:22:42.14:1065,42,0	0/0:17,0:17:30.10:0,30,557	0/0:13,0:13:36.10:0,36,619	0/0:26,0:25:57.20:0,57,1105	1/1:2,12:14:36.12:952,36,0	1/1:5,14:20:39.13:1098,39,0	1/1:8,14:21:39.56:1079,40,0	0/0:18,0:18:42.13:0,42,780	0/0:21,0:21:54.17:0,54,1008	0/0:30,0:30:69.24:0,69,1314	0/0:3,0:3:9.03:0,9,175
chr10	74298862	.	GGAAA	G	1822.17	PASS	AB=1.000;AC=32;AF=0.667;AN=48;BaseQRankSum=-0.664;DP=495;FS=6.040;HRun=0;HaplotypeScore=106.8991;InbreedingCoeff=0.5554;MQ=66.55;MQ0=3;MQRankSum=1.193;QD=5.99;ReadPosRankSum=0.221;VQSLOD=1.9877;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:0.04:0,0,12	1/1:9,0:9:6.01:69,6,0	./.	./.	0/0:19,0:19:18.06:0,18,390	1/1:9,5:14:3.01:44,3,0	1/1:16,0:16:2.59:17,3,0	./.	0/0:9,0:9:2.92:0,3,17	1/1:21,0:21:9.34:71,9,0	1/1:21,0:21:2.99:24,3,0	0/0:19,0:19:5.80:0,6,33	0/0:15,0:15:6.97:0,7,56	1/1:12,0:12:15.04:203,15,0	0/0:20,0:19:24.07:0,24,488	1/1:6,7:13:6.02:89,6,0	1/1:25,2:26:17.52:214,18,0	./.	0/1:20,0:20:39.48:143,0,39	1/1:16,12:28:21.07:299,21,0	1/1:11,0:10:18.06:266,18,0	0/0:24,0:24:4.58:0,5,32	1/1:21,0:19:2.13:5,2,0	1/1:15,0:15:1.55:4,2,0	0/0:20,0:19:12.83:0,13,105	1/1:12,8:20:24.07:339,24,0	1/1:18,7:24:6.02:89,6,0	1/1:13,0:13:8.96:107,9,0
chr10	74298940	.	GAAGA	G	2175.72	PASS	AB=0.900;AC=20;AF=0.357;AN=56;BaseQRankSum=13.725;DP=548;FS=6.296;HRun=0;HaplotypeScore=137.3543;InbreedingCoeff=0.6974;MQ=48.08;MQ0=23;MQRankSum=-13.000;QD=10.88;ReadPosRankSum=-2.575;VQSLOD=2.5095;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,1:11:16.99:120,17,0	0/0:12,0:12:36.05:0,36,693	0/0:18,0:3:7.82:0,8,59	0/0:11,0:3:8.96:0,9,69	0/0:21,0:20:44.68:0,45,841	0/0:9,0:9:15.04:0,15,261	0/0:15,0:13:21.03:0,21,465	1/1:27,0:24:30.25:205,30,0	0/1:2,4:6:59.34:120,0,59	0/1:31,0:28:99:196,0,158	0/1:26,0:23:95.65:231,0,96	1/1:1,9:10:27.06:322,27,0	1/1:3,5:8:16.76:184,17,0	0/0:19,0:19:51.09:0,51,1010	0/0:27,0:27:72.15:0,72,1294	0/0:31,0:31:75.23:0,75,1455	0/0:38,0:35:71.09:0,71,1579	1/1:9,1:7:12.65:81,13,0	0/0:15,0:15:39.03:0,39,633	0/0:43,0:43:99:0,99,1917	0/0:18,0:15:33.07:0,33,628	1/1:8,6:14:23.42:261,23,0	1/1:7,13:19:37.07:360,37,0	1/1:9,3:7:14.81:103,15,0	0/1:22,0:21:0.32:200,0,0	0/0:26,0:26:63.13:0,63,1232	0/0:29,0:28:69.22:0,69,1563	0/0:16,0:15:39.05:0,39,747
chr10	74298972	.	GAAGGAAGA	G	6249.12	PASS	AB=0.943;AC=19;AF=0.339;AN=56;BaseQRankSum=14.420;DP=608;FS=4.881;HRun=0;HaplotypeScore=186.1830;InbreedingCoeff=0.5372;MQ=55.62;MQ0=14;MQRankSum=-9.532;QD=26.04;ReadPosRankSum=1.499;VQSLOD=4.5020;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,1:16:41.89:577,42,0	0/0:14,0:14:39.07:0,39,1034	0/0:17,0:7:1.03:0,1,184	0/0:16,0:8:4.84:0,5,38	0/0:29,0:28:75.19:0,75,1923	0/0:16,0:16:45.10:0,45,1046	0/0:15,0:13:36.05:0,36,1099	0/1:16,0:16:12.32:217,0,12	0/1:6,4:10:91.07:325,0,91	0/1:36,0:35:99:432,0,414	0/1:32,0:31:99:375,0,144	1/1:10,9:19:57.14:1117,57,0	1/1:9,5:14:42.13:799,42,0	0/0:21,0:21:60.17:0,60,1841	0/0:20,0:20:57.13:0,57,2043	0/0:31,0:31:90.15:0,90,2227	0/0:41,0:40:99:0,100,2978	1/1:10,0:8:0.64:106,1,0	0/0:18,0:18:53.64:0,54,1128	0/0:36,0:36:99:0,102,3385	0/0:11,0:9:27.09:0,27,907	1/1:1,15:16:44.86:744,45,0	1/1:2,28:29:44.49:832,44,0	1/1:10,3:10:26.97:443,27,0	0/1:25,0:25:5.52:285,0,6	0/0:23,0:23:40.24:0,40,2090	0/0:39,0:39:99:0,114,3553	0/0:20,0:19:54.07:0,54,1712
chr10	74298976	.	GAAGA	G	3999.16	PASS	AB=0.912;AC=20;AF=0.357;AN=56;BaseQRankSum=14.032;DP=618;FS=5.665;HRun=0;HaplotypeScore=153.4958;InbreedingCoeff=0.6991;MQ=56.15;MQ0=13;MQRankSum=-8.260;QD=15.62;ReadPosRankSum=0.066;VQSLOD=3.1363;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,1:18:44.80:454,45,0	0/0:13,0:13:33.06:0,33,585	0/0:19,0:9:24:0,24,228	0/0:14,0:7:3.01:0,3,35	0/0:28,0:27:63.17:0,63,1082	0/0:17,0:17:45.03:0,45,676	0/0:14,0:12:36.05:0,36,680	1/1:22,0:21:29.76:251,30,0	0/1:5,6:11:57.29:167,0,57	0/1:39,0:38:99:338,0,148	0/1:33,0:32:86.06:283,0,86	1/1:22,0:22:52.57:692,53,0	1/1:14,0:14:38.15:399,38,0	0/0:21,0:21:51.14:0,51,1023	0/0:20,0:20:57.15:0,57,1191	0/0:30,0:30:57.17:0,57,1130	0/0:39,0:38:82.22:0,82,1663	1/1:10,0:9:17.85:131,18,0	0/0:21,0:21:39:0,39,632	0/0:34,0:34:93.26:0,93,1890	0/0:12,0:11:27.07:0,27,503	1/1:16,0:16:40.87:410,41,0	1/1:29,0:28:44.64:436,45,0	1/1:14,0:11:12.18:229,12,0	0/1:25,0:25:0.26:211,0,0	0/0:21,0:21:32.27:0,32,1118	0/0:39,0:39:99:0,111,2118	0/0:20,0:19:51.08:0,51,997
chr10	74298980	.	AAAGAAAGAAAGG	A	6266.46	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=14.493;DP=604;FS=0.808;HRun=0;HaplotypeScore=233.0741;InbreedingCoeff=0.1633;MQ=58.15;MQ0=8;MQRankSum=-8.323;QD=24.77;ReadPosRankSum=4.228;VQSLOD=3.5747;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:18:32.42:32,0,461	0/0:14,0:14:33.11:0,33,1540	0/0:17,0:10:30.10:0,30,1039	0/1:12,0:7:6.48:6,0,143	0/0:25,0:25:66.21:0,66,3159	0/0:17,0:17:45.15:0,45,2216	0/0:13,0:12:36.12:0,36,1674	0/0:21,0:20:33.93:0,34,525	0/1:11,0:11:99:148,0,191	1/1:5,32:36:87.15:1967,87,0	1/1:1,31:31:66.11:1614,66,0	0/1:22,0:22:99:379,0,379	0/1:15,0:15:99:260,0,238	0/0:20,0:20:51.18:0,51,2725	0/0:21,0:21:60.21:0,60,3033	0/0:26,0:26:57.17:0,57,2882	0/0:39,0:38:77.36:0,77,4268	0/0:11,0:10:0.28:0,0,214	0/0:20,0:20:45.07:0,45,1733	0/0:36,0:36:99:0,99,4598	0/0:11,0:11:27.09:0,27,1030	0/1:16,0:16:99:262,0,120	0/1:29,0:28:88.64:471,0,89	0/1:13,0:11:82.31:82,0,146	1/1:1,25:26:30.10:1002,30,0	0/1:21,0:21:42.29:42,0,2664	0/0:39,0:39:99:0,111,5391	0/0:21,0:20:57.20:0,57,2902
chr10	74299992	.	AC	A	1383.30	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.178;DP=632;FS=3.849;HRun=2;HaplotypeScore=60.1309;InbreedingCoeff=0.9823;MQ=97.63;MQ0=0;MQRankSum=-2.879;QD=33.74;ReadPosRankSum=-2.095;VQSLOD=2.9231;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1463	0/0:7,0:7:21.07:0,21,315	0/0:26,0:26:75.20:0,75,1075	0/0:37,0:37:96.29:0,96,1404	0/0:43,0:43:99:0,129,1894	0/0:14,0:14:42.14:0,42,629	0/0:25,0:25:72.24:0,72,1079	1/1:0,22:22:66.20:843,66,0	0/0:21,0:21:63.20:0,63,919	0/0:22,0:22:66.20:0,66,950	0/0:20,0:20:60.20:0,60,898	0/0:17,0:17:51.17:0,51,763	0/0:20,0:20:60.20:0,60,899	0/0:20,0:20:60.19:0,60,876	0/0:33,0:33:99:0,99,1484	0/0:20,0:20:60.18:0,60,860	0/0:19,0:19:54.18:0,54,808	1/1:1,18:19:51.17:662,51,0	0/0:13,0:13:39.11:0,39,561	0/0:27,0:27:81.22:0,81,1167	0/0:33,0:33:96.31:0,96,1416	0/0:21,0:21:63.21:0,63,944	0/0:21,0:21:63.21:0,63,943	0/0:16,0:16:48.16:0,48,719	0/0:19,0:19:57.19:0,57,854	0/0:30,0:30:90.30:0,90,1330	0/0:30,0:30:90.30:0,90,1349	0/0:4,0:4:12.04:0,12,180
chr10	74300989	.	C	CTGTGTGTGTG	2025.29	PASS	AB=0.921;AC=12;AF=0.222;AN=54;BaseQRankSum=3.379;DP=582;FS=6.269;HRun=0;HaplotypeScore=197.3543;InbreedingCoeff=0.6950;MQ=51.90;MQ0=7;MQRankSum=-7.901;QD=15.95;ReadPosRankSum=-0.086;VQSLOD=2.2075;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:18:0.30:0,0,0	0/0:13,0:13:27.08:0,27,719	0/0:23,0:12:36.09:0,36,807	0/0:31,0:15:25.39:0,25,446	0/0:23,0:23:30.10:0,30,891	0/0:23,0:23:54.19:0,54,1495	0/0:34,0:34:81.63:0,82,2245	1/1:22,0:19:17.99:397,18,0	./.	0/1:17,0:18:67:172,0,67	0/0:15,0:15:8.69:0,9,48	1/1:13,3:16:12.51:401,13,0	1/1:13,3:16:27.09:922,27,0	0/0:18,0:18:45.14:0,45,1284	0/0:24,0:24:54.08:0,54,1642	0/0:22,0:22:60.19:0,60,1744	0/0:29,0:29:72.20:0,72,1957	1/1:2,0:9:6.02:281,6,0	0/0:23,0:22:51.14:0,51,1410	0/0:16,0:16:27.08:0,27,732	0/0:47,0:45:93.27:0,93,2591	0/1:12,3:15:0:0,0,0	0/0:8,4:11:5.22:0,5,34	0/0:14,1:15:0:0,0,0	0/1:9,0:9:0:0,0,0	0/0:30,0:30:63.13:0,63,1529	0/0:26,0:25:62.95:0,63,1791	0/0:18,0:18:33.03:0,33,932
chr10	74301018	.	GTCTGTC	G	377.14	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.739;DP=533;FS=0.000;HRun=0;HaplotypeScore=132.7832;InbreedingCoeff=0.6955;MQ=55.32;MQ0=16;MQRankSum=-4.817;QD=8.98;ReadPosRankSum=-2.981;VQSLOD=1.9204;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:12:20.57:138,21,0	0/0:9,0:9:16.48:0,16,518	0/0:36,0:25:47.39:0,47,1115	0/0:70,0:30:57.97:0,58,1149	0/0:18,0:17:36.12:0,36,769	0/0:21,0:21:51.18:0,51,1383	0/0:39,0:38:93.59:0,94,2073	1/1:15,7:14:18.06:347,18,0	0/0:7,0:7:3.01:0,3,72	0/0:8,0:21:20.59:0,21,269	0/0:11,0:10:16.22:0,16,89	0/0:9,0:8:6.02:0,6,116	0/0:10,0:10:18.46:0,18,293	0/0:14,0:14:15.95:0,16,518	0/0:20,0:20:45.14:0,45,994	0/0:19,0:19:40.37:0,40,919	0/0:30,0:28:37.45:0,37,1230	1/1:6,2:6:2.97:20,3,0	0/0:21,0:20:42.11:0,42,1055	0/0:11,0:11:27.09:0,27,649	0/0:34,0:34:80.92:0,81,1896	0/0:5,0:5:2.91:0,3,56	0/0:5,0:5:2.91:0,3,49	0/0:13,0:11:6.02:0,6,111	0/0:12,0:11:14.49:0,14,52	0/0:22,0:22:62.50:0,62,1473	0/0:22,0:22:53.73:0,54,1227	0/0:10,0:10:21.07:0,21,415
chr10	74301034	.	GTCTTTCTCTCTC	G	343.64	PASS	AB=0.920;AC=5;AF=0.093;AN=54;BaseQRankSum=5.849;DP=507;FS=0.675;HRun=0;HaplotypeScore=159.0429;InbreedingCoeff=0.4095;MQ=49.49;MQ0=25;MQRankSum=-5.953;QD=6.48;ReadPosRankSum=0.339;VQSLOD=2.7477;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:4.07:0,4,12	0/0:11,0:10:16.58:0,17,419	0/0:25,0:18:22.41:0,22,293	0/0:58,0:22:2.56:0,3,313	0/0:18,0:17:31.03:0,31,397	0/0:22,0:21:55.15:0,55,1204	0/0:35,0:34:77.64:0,78,1261	1/1:15,0:9:17.75:113,18,0	0/0:6,0:6:3.01:0,3,120	0/1:21,0:20:32.73:279,0,33	1/1:15,0:11:2.48:64,2,0	0/0:9,0:8:8.64:0,9,50	0/0:10,0:10:14.83:0,15,100	0/0:14,0:14:29.99:0,30,641	0/0:22,0:22:42.07:0,42,424	0/0:20,0:20:36.06:0,36,659	0/0:25,0:23:44.94:0,45,1509	./.	0/0:20,0:18:51.85:0,52,582	0/0:11,0:12:27.17:0,27,221	0/0:30,0:30:80.96:0,81,1472	0/0:2,0:2:2.97:0,3,20	0/0:9,0:9:2.04:0,2,6	0/0:14,0:12:10.01:0,10,52	0/0:2,8:12:0.22:0,0,22	0/0:26,0:26:23.35:0,23,1297	0/0:19,0:19:55.79:0,56,852	0/0:10,0:10:22.22:0,22,205
chr10	74302597	.	AC	A	2055.50	PASS	AB=0.854;AC=17;AF=0.304;AN=56;BaseQRankSum=4.323;DP=544;FS=0.421;HRun=10;HaplotypeScore=62.2500;InbreedingCoeff=0.4422;MQ=75.87;MQ0=1;MQRankSum=-3.385;QD=8.22;ReadPosRankSum=2.582;VQSLOD=1.7899;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:35:32.62:0,33,207	0/0:9,0:9:24.04:0,24,247	0/1:17,1:18:4.57:5,0,207	0/0:19,0:19:9.46:0,9,338	0/0:20,1:21:10.25:0,10,411	0/0:22,0:22:36.10:0,36,398	0/0:22,1:23:22.54:0,23,465	0/1:10,1:15:17.37:17,0,20	1/1:0,14:14:35.99:312,36,0	0/0:9,0:13:9.56:0,10,56	0/0:9,0:9:8.96:0,9,75	1/1:2,16:18:41.99:364,42,0	1/1:2,21:23:56.99:495,57,0	0/1:15,4:19:39.07:39,0,276	0/0:31,1:32:49.08:0,49,739	0/0:17,1:18:25.57:0,26,506	0/0:35,0:35:96.19:0,96,1019	0/0:6,0:17:20.39:0,20,156	0/0:9,0:9:18.05:0,18,199	0/1:10,1:11:1.98:2,0,199	0/1:52,4:55:6.99:7,0,1020	1/1:1,11:12:23.98:208,24,0	1/1:0,14:14:35.97:312,36,0	0/1:5,24:29:0.38:455,0,0	0/0:5,0:9:5.86:0,6,38	0/1:18,2:20:19.03:19,0,265	0/0:14,0:14:39.09:0,39,420	0/0:8,1:9:1.02:0,1,239
chr10	74302712	.	TTC	T	1625.11	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=11.818;DP=565;FS=0.000;HRun=0;HaplotypeScore=82.4343;InbreedingCoeff=0.8146;MQ=57.33;MQ0=17;MQRankSum=-0.562;QD=7.19;ReadPosRankSum=-1.460;VQSLOD=2.9665;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:85.62:0,86,856	0/0:7,0:7:21.06:0,21,301	0/0:16,0:5:4.52:0,5,74	0/0:15,0:9:9.49:0,9,81	0/0:15,0:15:44.94:0,45,487	0/0:19,0:19:52.34:0,52,720	0/0:25,0:25:71.59:0,72,891	0/1:25,0:22:19.58:42,0,20	1/1:15,1:15:6.01:118,6,0	1/1:21,0:20:46.10:218,46,0	1/1:17,0:17:21.36:153,21,0	1/1:15,1:14:14.57:109,15,0	1/1:19,1:20:29.30:323,29,0	0/0:22,0:22:60.16:0,60,856	0/0:21,0:20:57.11:0,57,787	0/0:13,0:13:39.01:0,39,473	0/0:48,0:48:99:0,141,1957	0/1:15,0:10:4.18:4,0,10	0/0:16,0:15:44.94:0,45,537	0/0:22,0:22:62.76:0,63,814	0/0:19,0:19:53.52:0,54,677	1/1:23,1:24:25.08:255,25,0	1/1:15,2:15:23.85:154,24,0	1/1:22,5:27:38.31:292,38,0	1/1:27,0:27:28.73:166,29,0	0/0:21,0:21:63.14:0,63,802	0/0:17,0:16:38.97:0,39,530	0/0:13,0:11:9.48:0,9,250
chr10	74302713	.	TC	T	3187.69	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=12.456;DP=562;FS=0.000;HRun=1;HaplotypeScore=68.8551;InbreedingCoeff=0.8927;MQ=57.29;MQ0=17;MQRankSum=-1.705;QD=13.51;ReadPosRankSum=-1.788;VQSLOD=1.8673;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:83.04:0,83,551	0/0:7,0:7:21.05:0,21,239	0/0:16,0:5:4.50:0,5,63	0/1:15,0:9:15.22:15,0,34	0/0:15,0:15:44.93:0,45,420	0/0:19,0:19:31.51:0,32,535	0/0:25,0:25:66.11:0,66,672	1/1:25,0:21:30.86:182,31,0	1/1:15,1:15:33.63:233,34,0	1/1:20,1:20:58.66:401,59,0	1/1:17,0:17:45.32:253,45,0	1/1:1,15:14:15.04:192,15,0	1/1:16,4:20:48.66:481,49,0	0/0:23,0:23:63.14:0,63,698	0/0:20,0:19:57.09:0,57,618	0/0:13,0:13:38.98:0,39,385	0/0:49,0:49:99:0,141,1537	1/1:13,0:10:21.62:83,22,0	0/0:16,0:15:44.94:0,45,444	0/0:21,0:21:55.60:0,56,631	0/0:19,0:19:53.33:0,53,532	1/1:4,20:24:42.30:363,42,0	1/1:10,6:14:27.79:288,28,0	1/1:5,20:25:42.06:507,42,0	1/1:28,0:28:72.73:411,73,0	0/0:23,0:23:62.97:0,63,657	0/0:16,1:16:38.96:0,39,419	0/0:13,0:11:6.58:0,7,194
chr10	74302714	.	C	CT	854.47	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-0.428;DP=568;FS=0.000;HRun=11;HaplotypeScore=79.1486;InbreedingCoeff=0.4823;MQ=56.06;MQ0=17;MQRankSum=-1.615;QD=6.15;ReadPosRankSum=-3.725;VQSLOD=1.2187;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,18:32:48.89:603,49,0	0/0:7,0:7:17.93:0,18,139	0/0:15,0:4:2.97:0,3,21	0/0:14,0:9:5.26:0,5,29	0/0:16,0:16:17.90:0,18,139	0/0:20,1:21:11.22:0,11,261	0/0:23,1:25:18.42:0,18,306	1/1:22,3:21:34.48:207,34,0	1/1:16,0:15:0.75:3,1,0	0/1:21,0:20:17.06:17,0,57	0/0:17,0:17:9.70:0,10,110	0/0:16,0:14:8.02:0,8,20	0/0:20,0:20:12.95:0,13,46	0/0:23,0:23:50.77:0,51,392	0/0:20,0:19:47.80:0,48,371	0/0:13,0:13:26.87:0,27,205	0/0:49,0:49:99:0,101,785	1/1:13,0:10:25.60:143,26,0	0/0:17,0:16:7.63:0,8,110	0/0:21,0:22:40.83:0,41,307	0/1:19,0:19:24.73:25,0,192	0/0:24,0:24:9.37:0,9,36	0/0:16,0:14:7.19:0,7,17	0/0:25,0:25:20.98:0,21,54	0/0:30,0:30:8.37:0,8,131	0/0:21,0:21:21.66:0,22,164	0/0:17,0:16:26.85:0,27,206	0/1:12,0:11:11.79:12,0,82
chr10	74306591	.	T	TA	2486.60	PASS	AB=0.958;AC=14;AF=0.250;AN=56;BaseQRankSum=-9.999;DP=590;FS=0.427;HRun=11;HaplotypeScore=66.9474;InbreedingCoeff=0.7854;MQ=72.38;MQ0=0;MQRankSum=0.660;QD=15.64;ReadPosRankSum=2.112;VQSLOD=4.3454;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,1:31:46.30:0,46,533	0/0:6,0:6:11.90:0,12,87	0/1:16,0:13:8.20:8,0,96	0/1:9,1:11:11.50:12,0,42	0/0:26,0:27:67.74:0,68,512	0/0:15,0:15:35.34:0,35,263	0/0:24,0:24:53.72:0,54,415	0/0:19,0:19:43.06:0,43,325	1/1:3,17:20:36.07:365,36,0	0/0:39,1:40:68.13:0,68,711	0/0:20,0:21:41.73:0,42,319	1/1:4,14:18:3.96:221,4,0	1/1:2,21:23:45.09:457,45,0	0/0:24,0:24:44.68:0,45,342	0/0:22,1:23:17.33:0,17,318	0/0:20,0:21:46.83:0,47,354	0/0:27,0:27:77.68:0,78,598	0/0:15,0:15:26.88:0,27,209	0/0:19,1:21:19.39:0,19,323	0/0:23,0:23:41.75:0,42,325	0/0:18,0:18:41.81:0,42,321	1/1:3,15:18:42.07:421,42,0	1/1:3,24:27:60.59:610,61,0	1/1:3,22:25:57.11:579,57,0	0/0:19,0:19:53.77:0,54,414	0/0:33,0:33:70.62:0,71,531	0/0:16,0:16:35.85:0,36,279	0/0:8,0:8:14.93:0,15,116
chr10	74308365	.	AAC	A	142	PASS	AB=0.959;AC=10;AF=0.185;AN=54;BaseQRankSum=0.032;DP=602;FS=1.003;HRun=0;HaplotypeScore=89.9389;InbreedingCoeff=-0.0551;MQ=70.40;MQ0=16;MQRankSum=-0.829;QD=0.65;ReadPosRankSum=0.228;VQSLOD=1.7853;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,3:27:3.64:97,4,0	0/0:12,0:12:6.02:0,6,77	./.	0/0:47,0:34:0:0,0,0	0/1:22,0:22:16.96:17,0,122	0/1:30,0:29:25.73:26,0,286	0/1:23,0:22:5.08:5,0,304	0/0:21,0:20:2.96:0,3,19	0/0:20,0:19:20.97:0,21,194	0/0:22,0:22:25.72:0,26,231	0/0:19,0:19:11.78:0,12,92	0/0:15,0:16:20.90:0,21,161	0/0:17,0:17:11.94:0,12,90	0/1:19,1:20:38.88:39,0,134	0/0:19,0:19:17.36:0,17,204	0/1:15,5:21:48.41:48,0,231	0/0:20,0:20:18.01:0,18,215	0/0:12,0:12:8.94:0,9,70	0/0:13,0:13:8.95:0,9,80	0/1:16,1:17:20.51:21,0,55	0/1:32,0:29:14.77:15,0,118	0/0:30,0:30:8.99:0,9,81	0/0:17,0:15:14.96:0,15,128	0/0:25,0:25:8.97:0,9,71	0/0:21,0:21:14.98:0,15,130	0/1:24,0:24:7.34:7,0,138	0/0:18,0:18:18.86:0,19,183	0/0:3,0:3:2.90:0,3,16
chr10	74308369	.	C	CAT	1837.60	PASS	AB=0.628;AC=12;AF=0.214;AN=56;BaseQRankSum=-0.053;DP=653;FS=1.702;HRun=0;HaplotypeScore=100.8050;InbreedingCoeff=0.1345;MQ=65.95;MQ0=17;MQRankSum=2.961;QD=8.02;ReadPosRankSum=2.419;VQSLOD=3.5135;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:31:38.25:301,0,38	0/0:12,0:12:32.82:0,33,291	0/0:32,0:16:48.04:0,48,483	0/0:44,0:31:79.84:0,80,792	0/0:22,0:22:47.82:0,48,422	0/0:36,0:35:85.01:0,85,746	0/0:25,0:23:54:0,54,589	0/0:23,0:22:50.80:0,51,388	0/1:6,16:22:39.03:209,0,39	1/1:3,20:23:35.32:567,35,0	0/1:5,17:22:18.15:118,0,18	0/1:3,11:15:11.83:238,0,12	0/1:5,12:17:32.21:100,0,32	0/0:22,0:22:22.36:0,22,284	0/0:24,0:24:53.95:0,54,519	0/0:23,0:23:42.97:0,43,460	0/0:24,0:24:59.46:0,59,533	0/0:13,0:13:13.10:0,13,183	0/0:15,0:15:41.81:0,42,353	0/0:18,0:17:38.91:0,39,333	0/0:39,0:36:68.49:0,68,587	0/1:6,23:29:20.11:49,0,20	0/1:6,15:19:21.05:153,0,21	1/1:2,23:27:9.03:162,9,0	0/1:7,11:20:51.38:98,0,51	0/0:24,0:24:19.56:0,20,484	0/0:24,0:24:62.68:0,63,528	0/0:4,0:4:5.97:0,6,45
chr10	74308845	.	G	GA	2296.60	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=4.598;DP=463;FS=4.347;HRun=8;HaplotypeScore=61.4090;InbreedingCoeff=0.9892;MQ=83.03;MQ0=0;MQRankSum=-0.579;QD=26.40;ReadPosRankSum=0.763;VQSLOD=4.5116;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:20:48.14:554,48,0	0/0:5,0:5:15.01:0,15,137	0/0:16,0:16:25.07:0,25,228	0/0:14,0:14:13.41:0,13,130	0/0:24,0:24:60.02:0,60,549	0/0:16,0:16:45.02:0,45,411	0/0:11,0:11:24:0,24,220	0/0:28,0:28:66.02:0,66,600	1/1:1,10:11:27.08:312,27,0	0/0:25,0:25:72.03:0,72,659	0/0:24,0:24:69.04:0,69,631	1/1:3,15:18:45.13:519,45,0	1/1:3,9:12:24.96:279,25,0	0/0:9,0:9:27:0,27,242	0/0:19,0:19:51:0,51,460	0/0:18,0:18:48.02:0,48,439	0/0:12,0:12:27.01:0,27,247	0/0:16,0:16:44.61:0,45,411	0/0:22,0:22:51.01:0,51,463	0/0:17,0:17:42.01:0,42,384	0/0:10,0:10:24.01:0,24,219	1/1:1,9:10:27.08:312,27,0	1/1:0,9:9:27.08:312,27,0	1/1:1,6:7:18.05:208,18,0	0/0:14,0:14:36.02:0,36,330	0/0:30,0:30:81.03:0,81,738	0/0:28,0:28:72.02:0,72,658	0/0:18,0:18:47.99:0,48,433
chr10	74309316	.	AC	A	8244.11	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=17.185;DP=625;FS=0.000;HRun=4;HaplotypeScore=94.5391;InbreedingCoeff=0.9933;MQ=70.04;MQ0=0;MQRankSum=-1.344;QD=30.65;ReadPosRankSum=0.696;VQSLOD=4.6510;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,35:36:96.29:1151,96,0	0/0:9,0:9:27.09:0,27,378	0/0:24,0:24:51.16:0,51,682	0/0:16,0:16:42.11:0,42,517	0/0:44,0:44:99:0,126,1728	0/0:27,0:27:75.19:0,75,1009	0/0:24,0:24:63.11:0,63,805	1/1:3,31:34:93.24:1082,93,0	1/1:0,17:17:42.13:503,42,0	1/1:3,21:24:69.13:784,69,0	1/1:3,12:15:33.10:396,33,0	1/1:3,14:17:42.13:501,42,0	1/1:1,17:18:45.14:539,45,0	0/0:14,0:14:39.12:0,39,530	0/0:26,0:26:78.21:0,78,1052	0/0:15,1:16:12.11:0,12,554	0/0:35,0:35:99:0,99,1355	1/1:1,23:24:63.19:755,63,0	0/0:17,0:17:39.10:0,39,511	0/0:23,0:23:69.21:0,69,929	0/0:23,0:23:51.17:0,51,713	1/1:0,18:18:51.16:611,51,0	1/1:1,22:23:51.16:611,51,0	1/1:2,14:16:39.07:450,39,0	1/1:1,26:27:72.22:861,72,0	0/0:29,1:30:39.24:0,39,953	0/0:23,0:20:60.09:0,60,773	0/0:5,0:5:15.05:0,15,210
chr10	74310227	.	C	CA	634.39	PASS	AB=0.652;AC=10;AF=0.179;AN=56;BaseQRankSum=-1.519;DP=340;FS=2.290;HRun=13;HaplotypeScore=49.0191;InbreedingCoeff=0.3052;MQ=77.42;MQ0=1;MQRankSum=-2.305;QD=8.03;ReadPosRankSum=-0.252;VQSLOD=2.0765;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:4,9:13:7.92:72,0,8	0/0:6,0:6:14.88:0,15,103	0/0:13,0:10:4.52:0,5,54	0/0:9,0:10:7.38:0,7,39	0/0:17,0:19:18.53:0,19,234	0/0:14,1:15:4.82:0,5,177	0/0:5,0:5:8.89:0,9,62	0/0:7,0:18:21.72:0,22,74	0/1:2,10:12:2.56:121,0,3	0/0:19,1:21:12.81:0,13,224	0/0:11,0:12:25.79:0,26,168	1/1:2,10:12:4.33:176,4,0	1/1:2,10:12:15.90:140,16,0	0/0:10,0:11:16.81:0,17,108	0/0:11,0:11:26.72:0,27,185	0/0:11,0:14:26.83:0,27,160	0/0:15,1:18:11.80:0,12,208	0/0:2,0:6:8.14:0,8,23	0/0:8,0:9:22.87:0,23,150	0/0:13,3:17:28.66:0,29,191	0/1:6,2:8:37.86:38,0,64	0/1:3,2:5:29.10:41,0,29	0/1:4,6:10:8.57:72,0,9	0/1:3,4:7:2.56:121,0,3	0/0:10,0:10:11.82:0,12,82	0/0:19,0:22:37.91:0,38,239	0/0:15,0:16:25.72:0,26,170	0/0:8,0:8:20.79:0,21,144
chr10	74311614	.	TAC	T	368.14	PASS	AB=0.928;AC=17;AF=0.304;AN=56;BaseQRankSum=3.310;DP=501;FS=0.000;HRun=0;HaplotypeScore=75.0842;InbreedingCoeff=0.0170;MQ=67.68;MQ0=10;MQRankSum=-1.119;QD=1.36;ReadPosRankSum=1.402;VQSLOD=1.4025;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:32,3:36:20.77:167,0,21	0/0:10,0:9:15.03:0,15,192	0/0:25,0:15:0:0,0,0	0/0:28,0:20:0:0,0,0	0/0:17,0:16:3.01:0,3,45	0/1:20,0:20:1.87:2,0,509	0/0:23,0:23:1.64:0,2,175	0/1:28,0:28:22.63:23,0,52	0/0:8,0:14:11.99:0,12,102	1/1:14,0:14:7.19:39,7,0	1/1:9,0:13:8.52:41,9,0	0/0:11,0:12:17.93:0,18,146	0/0:12,0:14:12.01:0,12,122	0/1:12,0:12:40.78:41,0,210	0/1:20,1:20:15.31:15,0,170	0/1:10,5:14:76.87:77,0,114	0/1:18,2:20:2.53:3,0,362	0/1:15,1:16:22.03:22,0,333	0/0:16,0:16:2.60:0,3,10	0/1:15,2:16:20.59:21,0,106	0/1:30,0:30:2.53:3,0,345	0/0:12,0:12:17.82:0,18,173	0/0:9,0:10:6:0,6,51	0/0:13,0:16:23.35:0,23,200	1/1:6,0:9:11.36:55,11,0	0/0:17,0:17:12.41:0,12,178	0/1:15,3:18:11.57:12,0,225	0/0:15,0:14:12.03:0,12,159
chr10	74311707	.	T	TG	5215.76	PASS	AB=0.520;AC=23;AF=0.411;AN=56;BaseQRankSum=-9.065;DP=512;FS=5.966;HRun=7;HaplotypeScore=63.3349;InbreedingCoeff=0.9330;MQ=75.59;MQ0=3;MQRankSum=-2.124;QD=24.15;ReadPosRankSum=0.854;VQSLOD=5.3602;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:19:42.13:507,42,0	0/0:8,0:8:21.03:0,21,203	0/0:18,0:18:4.52:0,5,188	0/0:16,0:16:24.14:0,24,258	0/0:12,0:12:27.04:0,27,260	0/0:19,0:19:51.06:0,51,486	0/0:25,0:25:69.11:0,69,666	1/1:11,18:29:48.10:541,48,0	0/1:1,12:13:1.90:263,0,2	1/1:5,19:23:54.17:650,54,0	1/1:1,18:19:16.16:478,16,0	1/1:1,16:17:32.84:394,33,0	1/1:2,13:15:35.99:434,36,0	0/0:20,0:20:54.09:0,54,521	0/0:20,0:20:48.07:0,48,463	0/0:17,0:17:39.04:0,39,370	0/0:25,0:25:72.07:0,72,681	1/1:2,12:14:33.10:398,33,0	0/0:16,0:16:33.05:0,33,318	0/0:18,0:18:51.07:0,51,486	0/0:24,0:24:50.95:0,51,478	1/1:4,13:16:27.08:325,27,0	1/1:2,17:19:33.02:398,33,0	1/1:1,17:18:42.13:503,42,0	1/1:4,8:11:27.08:323,27,0	0/0:23,1:24:26.84:0,27,535	0/0:22,0:22:66.09:0,66,632	0/0:12,0:12:36.06:0,36,347
chr10	74311870	.	ATATG	A	1046.30	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=3.973;DP=426;FS=0.484;HRun=0;HaplotypeScore=107.4006;InbreedingCoeff=0.8109;MQ=60.90;MQ0=5;MQRankSum=-2.426;QD=12.31;ReadPosRankSum=2.008;VQSLOD=3.0349;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,6:20:44.64:469,45,0	0/0:8,0:8:17.93:0,18,298	0/0:11,0:7:4.23:0,4,78	0/0:8,0:5:11.67:0,12,84	0/0:16,0:16:38.61:0,39,604	0/0:22,0:22:44.85:0,45,1000	0/0:16,0:16:41.76:0,42,613	0/0:26,0:24:53.10:0,53,435	0/1:17,0:17:21.04:123,0,21	0/0:23,0:22:35.99:0,36,703	0/0:25,0:24:19.92:0,20,575	1/1:10,0:9:16.33:99,16,0	1/1:9,0:8:16.81:102,17,0	0/0:13,0:13:0.66:0,1,535	0/0:14,0:14:41.91:0,42,626	0/0:16,0:16:30.73:0,31,266	0/0:16,0:16:16.89:0,17,403	0/0:7,0:6:14.61:0,15,125	0/0:20,0:20:30.34:0,30,560	0/0:17,0:17:48.02:0,48,794	0/0:12,0:11:33.05:0,33,589	1/1:8,0:8:15.52:114,16,0	1/1:8,0:8:22.31:161,22,0	1/1:13,0:13:22.59:164,23,0	0/0:17,0:17:19.03:0,19,488	0/0:22,0:22:59.98:0,60,1017	0/0:20,0:20:51.82:0,52,1040	0/0:12,0:12:32.96:0,33,613
chr10	74311872	.	ATG	A	310.04	PASS	AB=0.886;AC=15;AF=0.288;AN=52;BaseQRankSum=2.067;DP=438;FS=0.721;HRun=0;HaplotypeScore=97.1878;InbreedingCoeff=-0.1115;MQ=58.88;MQ0=7;MQRankSum=1.583;QD=1.46;ReadPosRankSum=2.419;VQSLOD=1.8131;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:14.32:76,14,0	0/1:5,3:8:21.88:22,0,117	./.	./.	0/1:14,1:15:12.86:13,0,226	0/1:21,0:22:22.78:23,0,426	0/1:12,5:18:43.78:44,0,229	0/0:23,0:21:7.54:0,8,19	0/0:16,0:16:6.57:0,7,22	0/0:21,0:23:29.52:0,30,244	0/0:16,0:24:14.33:0,14,195	0/0:10,0:9:1.36:0,1,3	0/0:9,0:8:4.57:0,5,11	0/1:12,0:12:15.52:16,0,198	0/1:13,1:14:3.89:4,0,285	0/1:7,8:15:50.05:128,0,50	0/1:12,5:17:35.02:35,0,235	0/1:7,0:6:0.35:5,0,0	0/1:19,0:20:14.46:14,0,108	0/0:20,0:20:28.77:0,29,342	0/0:12,0:11:18.06:0,18,256	0/1:8,0:8:2.03:3,0,2	0/0:8,0:8:0.89:0,1,2	0/0:16,0:15:0.89:0,1,3	0/0:12,0:16:4.55:0,5,141	0/0:23,0:23:39.06:0,39,500	0/1:18,2:20:63.45:63,0,439	0/1:13,2:15:2.43:2,0,298
chr10	74311897	.	TG	T	1552.19	PASS	AB=0.800;AC=15;AF=0.268;AN=56;BaseQRankSum=6.453;DP=486;FS=11.039;HRun=1;HaplotypeScore=107.0480;InbreedingCoeff=0.8325;MQ=51.72;MQ0=13;MQRankSum=-7.445;QD=15.37;ReadPosRankSum=-0.170;VQSLOD=2.4495;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:25.08:0,25,157	0/0:8,0:8:16.87:0,17,225	0/0:31,0:9:25.63:0,26,305	0/0:33,0:8:21.05:0,21,246	0/0:21,0:20:40.95:0,41,558	0/0:23,0:23:63.83:0,64,875	0/0:14,0:14:30.72:0,31,410	1/1:6,17:21:32.83:640,33,0	1/1:9,8:17:24.78:283,25,0	0/0:18,0:17:36.26:0,36,453	0/0:22,0:21:28.60:0,29,322	1/1:6,5:10:6.50:119,6,0	1/1:7,5:11:1.14:185,1,0	0/0:12,0:12:35.96:0,36,458	0/0:14,0:14:40.95:0,41,585	0/0:15,0:15:25.32:0,25,256	0/0:21,0:21:45.73:0,46,595	1/1:6,2:6:17.89:209,18,0	0/0:17,0:17:45.73:0,46,601	0/0:21,0:21:57.17:0,57,791	0/0:9,0:8:24.08:0,24,364	1/1:6,5:11:9.34:171,9,0	0/1:6,2:8:5.37:34,0,5	1/1:8,3:10:5.52:93,6,0	0/0:21,0:21:22.71:0,23,331	0/0:22,0:22:65.25:0,65,931	0/0:24,0:24:66.66:0,67,865	0/0:17,0:17:43.54:0,44,623
chr10	74311904	.	G	GC	2480.76	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=12.722;DP=467;FS=14.805;HRun=0;HaplotypeScore=100.2701;InbreedingCoeff=0.7357;MQ=56.15;MQ0=10;MQRankSum=-12.733;QD=16.00;ReadPosRankSum=-5.059;VQSLOD=3.1614;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:6.43:258,6,0	0/0:7,0:7:14.99:0,15,176	0/0:34,0:12:36.09:0,36,469	0/0:37,0:12:36.11:0,36,473	0/0:20,0:19:39.08:0,39,520	0/0:21,0:22:60.06:0,60,751	0/0:14,0:14:29.98:0,30,358	1/1:2,18:19:12.50:628,13,0	1/1:8,5:13:26.40:301,26,0	0/1:16,0:15:13.14:13,0,152	0/1:21,0:21:59.63:114,0,60	1/1:7,2:8:17.95:207,18,0	1/1:5,4:9:24.53:294,25,0	0/0:11,0:11:33.08:0,33,410	0/0:15,0:15:45.10:0,45,602	0/0:17,0:17:35.90:0,36,405	0/0:20,0:21:47.16:0,47,563	1/1:2,3:4:12.03:156,12,0	0/0:20,0:20:57.07:0,57,741	0/0:18,0:18:45.62:0,46,628	0/0:10,0:9:24.06:0,24,317	1/1:5,4:9:21.06:253,21,0	1/1:7,1:8:15.05:186,15,0	1/1:7,1:7:10.09:89,10,0	0/1:18,0:18:43.33:190,0,43	0/0:23,0:23:69.22:0,69,945	0/0:26,0:26:72.06:0,72,894	0/0:17,0:17:42.97:0,43,560
chr10	74311912	.	C	CAAGTGTTT	10614.58	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=6.517;DP=505;FS=15.482;HRun=0;HaplotypeScore=129.5012;InbreedingCoeff=0.9156;MQ=59.66;MQ0=7;MQRankSum=-12.862;QD=54.43;ReadPosRankSum=-4.164;VQSLOD=2.9439;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,11:16:27.09:1039,27,0	0/0:7,0:7:15.01:0,15,336	0/0:33,0:12:34.67:0,35,931	0/0:42,0:17:48.08:0,48,1182	0/0:18,0:18:51.17:0,51,1326	0/0:17,0:17:51.13:0,51,1409	0/0:18,0:18:42.12:0,42,1075	0/1:30,0:30:3.56:2310,0,4	1/1:7,7:19:30.10:974,30,0	1/1:3,0:13:30.07:943,30,0	1/1:5,0:20:9.25:1007,9,0	1/1:2,5:11:18.06:709,18,0	1/1:4,5:14:27.09:1029,27,0	0/0:10,0:10:30.06:0,30,781	0/0:15,0:15:45.15:0,45,1321	0/0:15,0:15:36.12:0,36,1049	0/0:21,0:21:47.88:0,48,1379	1/1:3,0:9:12.04:272,12,0	0/0:20,0:20:60.20:0,60,1703	0/0:19,0:19:57.20:0,57,1613	0/0:11,0:11:27.05:0,27,686	1/1:4,4:11:21.07:691,21,0	1/1:1,9:13:18.06:641,18,0	1/1:4,5:11:6.02:220,6,0	1/1:4,0:25:23.94:778,24,0	0/0:23,0:23:63.17:0,63,1837	0/0:25,0:25:69.24:0,69,1952	0/0:16,0:16:44.36:0,44,1279
chr10	74311967	.	G	GT	511.29	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.555;DP=524;FS=4.248;HRun=8;HaplotypeScore=70.0247;InbreedingCoeff=0.7843;MQ=73.70;MQ0=0;MQRankSum=0.142;QD=22.23;ReadPosRankSum=-1.398;VQSLOD=3.6640;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:26.06:0,26,581	0/0:7,0:7:21.01:0,21,192	0/0:22,0:18:35.20:0,35,311	0/0:20,0:20:35.95:0,36,319	1/1:2,21:23:54.12:606,54,0	0/0:18,0:18:45.02:0,45,411	0/0:19,0:19:51.03:0,51,467	0/0:31,0:31:65.98:0,66,595	0/0:17,0:17:27:0,27,246	0/0:13,0:13:1.31:0,1,265	0/0:15,0:15:42.02:0,42,384	0/0:14,0:14:30.02:0,30,274	0/0:22,1:23:13.47:0,13,371	0/0:5,0:5:15.01:0,15,137	0/0:17,0:17:45:0,45,407	0/0:18,0:18:48.02:0,48,439	0/0:27,0:27:57.02:0,57,521	0/0:14,0:15:29.01:0,29,245	0/0:21,0:21:51.01:0,51,467	0/0:21,0:21:54.02:0,54,494	0/0:18,0:18:30.48:0,30,438	0/0:13,0:13:27.01:0,27,247	0/0:18,0:18:30.01:0,30,274	0/0:15,0:15:33.02:0,33,300	0/0:26,0:26:36.02:0,36,329	0/0:21,0:21:60.02:0,60,545	0/0:19,0:19:51.02:0,51,467	0/0:19,0:19:51.03:0,51,467
chr10	74312664	.	A	AT	4200.38	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-11.836;DP=573;FS=0.378;HRun=8;HaplotypeScore=55.5689;InbreedingCoeff=0.9241;MQ=68.37;MQ0=10;MQRankSum=0.269;QD=25.30;ReadPosRankSum=2.155;VQSLOD=4.3889;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:53.89:595,54,0	0/0:11,0:11:24:0,24,220	0/0:26,0:20:27.55:0,28,245	0/1:11,0:11:6.02:6,0,70	0/0:31,0:30:81.01:0,81,731	0/0:21,0:21:57.03:0,57,522	0/0:14,0:13:39.01:0,39,352	0/0:36,0:29:72.01:0,72,652	1/1:1,21:22:60.18:693,60,0	0/0:17,0:17:48.02:0,48,439	0/0:22,0:22:51.01:0,51,463	1/1:2,21:23:54.16:623,54,0	1/1:3,22:25:29.70:590,30,0	0/0:21,0:21:57.03:0,57,521	0/0:20,0:20:60.03:0,60,549	0/0:20,0:20:54:0,54,485	0/0:25,0:25:69.04:0,69,631	0/0:17,0:17:38.97:0,39,349	0/0:21,0:21:55.37:0,55,515	0/0:22,0:22:50.99:0,51,461	0/0:8,0:8:18.01:0,18,165	1/1:4,11:15:33.10:378,33,0	1/1:3,16:19:48.14:554,48,0	1/1:2,25:27:66.20:762,66,0	0/0:19,0:19:54.02:0,54,494	0/0:26,0:26:66.03:0,66,604	0/0:21,0:21:54.02:0,54,494	0/0:8,0:8:24.01:0,24,220
chr10	74314843	.	G	GTT	3041.81	PASS	AB=0.667;AC=23;AF=0.411;AN=56;BaseQRankSum=5.650;DP=602;FS=2.170;HRun=11;HaplotypeScore=84.9632;InbreedingCoeff=0.8685;MQ=73.22;MQ0=1;MQRankSum=-2.952;QD=13.17;ReadPosRankSum=-3.582;VQSLOD=1.6606;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:20:28.79:245,29,0	0/0:10,0:11:26.76:0,27,245	0/0:14,0:15:18.53:0,19,158	0/0:13,0:12:9.84:0,10,117	0/0:30,0:33:40.38:0,40,551	0/0:18,0:21:44.51:0,45,402	0/0:20,0:22:56.54:0,57,518	1/1:14,0:38:17.02:248,17,0	1/1:4,0:16:22.19:185,22,0	1/1:2,16:20:54.08:670,54,0	1/1:3,17:21:55.20:607,55,0	1/1:3,0:13:3:29,3,0	1/1:4,1:13:12.02:115,12,0	0/0:15,0:16:26.88:0,27,310	0/0:24,0:25:60:0,60,626	0/0:27,0:27:72.02:0,72,691	0/0:33,0:33:84.07:0,84,806	0/1:12,0:24:26.57:64,0,27	0/0:20,0:22:52.97:0,53,443	0/0:25,0:28:38.65:0,39,580	0/0:22,0:22:53.50:0,54,504	1/1:2,0:12:26.92:236,27,0	1/1:2,0:17:20.58:172,21,0	1/1:2,0:14:14.99:134,15,0	1/1:2,19:23:42.09:555,42,0	0/0:26,0:27:38.57:0,39,350	0/0:35,0:41:80.61:0,81,861	0/0:11,0:13:5.80:0,6,132
chr10	74315711	.	CATA	C	7258.65	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.033;DP=731;FS=4.595;HRun=0;HaplotypeScore=102.9629;InbreedingCoeff=0.9943;MQ=82.58;MQ0=0;MQRankSum=-2.757;QD=43.21;ReadPosRankSum=3.381;VQSLOD=6.6631;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:96.33:1622,96,0	0/0:10,0:10:30.10:0,30,692	0/0:17,0:17:48.14:0,48,954	0/0:24,0:24:69.19:0,69,1392	0/0:40,0:40:99:0,111,2533	0/0:33,0:33:99:0,99,2278	0/0:18,0:18:54.19:0,54,1246	0/0:27,0:27:81.28:0,81,1849	1/1:0,26:26:66.23:1125,66,0	0/0:48,0:48:99:0,138,3051	0/0:28,0:28:81.28:0,81,1847	1/1:0,19:19:54.18:921,54,0	1/1:1,23:24:66.23:1125,66,0	0/0:28,0:28:84.29:0,84,1914	0/0:32,0:32:96.32:0,96,2144	0/0:21,1:22:12.04:0,12,1332	0/0:32,0:32:93.32:0,93,2139	0/0:18,0:18:54.19:0,54,1245	0/0:20,0:20:60.21:0,60,1384	0/0:37,0:37:99:0,99,2233	0/0:27,0:27:81.28:0,81,1868	1/1:1,15:16:36.04:579,36,0	1/1:3,19:22:57.19:966,57,0	1/1:1,22:23:54.10:921,54,0	0/0:28,0:28:81.27:0,81,1805	0/0:24,0:24:72.21:0,72,1572	0/0:36,0:36:99:0,108,2427	0/0:14,0:14:39.11:0,39,848
chr10	74317446	.	G	GGTCT	12864.20	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-15.630;DP=732;FS=10.535;HRun=0;HaplotypeScore=116.8677;InbreedingCoeff=0.9884;MQ=65.88;MQ0=0;MQRankSum=-0.432;QD=42.04;ReadPosRankSum=1.141;VQSLOD=5.1126;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,35:39:66.23:1619,66,0	0/0:9,0:9:24.08:0,24,398	0/0:23,0:22:32.91:0,33,422	0/0:31,0:31:53.80:0,54,692	0/0:25,0:25:66.10:0,66,975	0/0:36,0:35:71.71:0,72,1081	0/0:28,0:28:61.01:0,61,888	1/1:14,11:27:41.78:724,42,0	1/1:9,19:29:51.17:1254,51,0	1/1:6,19:25:14.44:1370,14,0	1/1:4,7:12:21.07:516,21,0	1/1:10,25:38:57.20:1399,57,0	1/1:6,26:33:58.08:1403,58,0	0/0:28,0:28:72.20:0,72,1080	0/0:31,0:31:72.25:0,72,1189	0/0:29,0:29:54.16:0,54,829	0/0:28,0:28:48.16:0,48,791	1/1:7,16:24:35.47:824,35,0	0/0:22,0:20:45.11:0,45,648	0/0:19,0:19:48.15:0,48,771	0/0:54,0:54:99:0,102,1566	1/1:1,13:16:33.11:811,33,0	1/1:2,14:19:30.10:736,30,0	1/1:4,21:25:51.18:1254,51,0	1/1:2,15:17:39.13:955,39,0	0/0:29,1:30:10.64:0,11,1200	0/0:23,0:23:57.18:0,57,913	0/0:9,0:9:15.05:0,15,249
chr10	74318701	.	TG	T	5564.86	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.039;DP=629;FS=15.083;HRun=2;HaplotypeScore=65.4039;InbreedingCoeff=0.9992;MQ=86.13;MQ0=0;MQRankSum=-2.990;QD=36.14;ReadPosRankSum=1.844;VQSLOD=3.8663;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:96.31:1247,96,0	0/0:8,0:8:24.07:0,24,342	0/0:20,0:20:54.17:0,54,758	0/0:23,0:23:69.20:0,69,985	0/0:31,0:31:93.29:0,93,1370	0/0:26,0:26:78.25:0,78,1149	0/0:16,0:16:42.14:0,42,630	0/0:32,0:32:87.29:0,87,1304	1/1:0,8:8:24.08:312,24,0	0/0:27,0:27:78.25:0,78,1136	0/0:21,0:21:63.21:0,63,943	1/1:1,18:19:48.16:623,48,0	1/1:0,25:25:75.24:974,75,0	0/0:19,0:19:57.18:0,57,836	0/0:22,0:22:63.21:0,63,943	0/0:22,0:22:63.21:0,63,942	0/0:22,0:22:63.20:0,63,925	0/0:17,0:17:42.11:0,42,602	0/0:19,0:19:54.18:0,54,804	0/0:19,0:19:57.19:0,57,854	0/0:42,0:42:99:0,120,1776	1/1:0,23:23:60.20:779,60,0	1/1:1,23:24:69.22:890,69,0	1/1:0,22:22:57.19:740,57,0	0/0:18,0:18:48.16:0,48,719	0/0:19,0:19:57.19:0,57,855	0/0:33,0:33:99:0,99,1482	0/0:19,0:19:57.18:0,57,834
chr10	74318982	.	G	GA	7249.91	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-5.423;DP=446;FS=0.000;HRun=4;HaplotypeScore=42.9342;InbreedingCoeff=0.9801;MQ=77.09;MQ0=0;MQRankSum=0.334;QD=35.89;ReadPosRankSum=-1.277;VQSLOD=4.3029;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:60.20:821,60,0	0/0:6,0:6:18.05:0,18,204	0/0:15,0:15:35.27:0,35,350	0/0:4,0:4:9.02:0,9,102	0/0:29,0:29:78.22:0,78,885	0/0:19,0:19:54.15:0,54,613	0/0:7,0:7:18.05:0,18,204	1/1:5,30:35:90.27:1196,90,0	1/1:0,9:9:24.08:328,24,0	1/1:0,22:22:66.22:901,66,0	1/1:2,24:26:72.20:964,72,0	1/1:1,11:12:33.11:452,33,0	1/1:2,10:12:27.09:369,27,0	0/0:15,0:15:42.12:0,42,476	0/0:14,0:14:42.12:0,42,476	0/0:13,0:13:39.11:0,39,442	0/0:18,0:18:51.13:0,51,568	1/1:3,21:24:29.17:784,29,0	0/0:16,0:16:45.12:0,45,505	0/0:21,0:21:60.17:0,60,681	0/0:7,0:7:21.06:0,21,238	1/1:2,9:11:27.09:369,27,0	1/1:1,11:12:33.11:451,33,0	1/1:0,3:3:9.03:123,9,0	1/1:1,13:14:36.12:493,36,0	0/0:25,1:26:31.15:0,31,742	0/0:20,0:19:57.16:0,57,646	0/0:14,0:14:42.07:0,42,447
chr10	74319294	.	TC	T	1892.40	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.407;DP=665;FS=13.386;HRun=4;HaplotypeScore=66.3935;InbreedingCoeff=0.9978;MQ=79.39;MQ0=0;MQRankSum=-0.697;QD=30.04;ReadPosRankSum=-0.804;VQSLOD=2.1959;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,117,1587	0/0:8,0:8:24.08:0,24,336	0/0:9,0:9:27.09:0,27,362	0/0:24,0:24:53.87:0,54,646	0/0:30,0:30:84.21:0,84,1087	0/0:21,0:21:57.19:0,57,798	0/0:22,0:22:66.21:0,66,902	1/1:6,32:38:96.29:1152,96,0	0/0:20,0:20:54.14:0,54,734	0/0:21,0:21:54.15:0,54,709	0/0:20,0:20:54.17:0,54,736	0/0:31,0:31:90.28:0,90,1223	0/0:21,0:21:57.19:0,57,788	0/0:30,0:30:81.23:0,81,1110	0/0:28,0:28:78.20:0,78,1053	0/0:25,0:25:69.23:0,69,950	0/0:29,0:29:87.28:0,87,1196	1/1:0,25:25:72.22:862,72,0	0/0:21,0:21:57.16:0,57,778	0/0:15,0:15:39.13:0,39,545	0/0:40,0:40:99:0,111,1535	0/0:16,0:16:42.13:0,42,568	0/0:13,0:13:36.11:0,36,487	0/0:30,0:30:84.27:0,84,1158	0/0:15,0:15:45.15:0,45,630	0/0:34,0:34:99:0,99,1327	0/0:24,0:24:69.23:0,69,964	0/0:10,0:10:27.09:0,27,378
chr10	74319462	.	G	GCACACACATGTGCA	123.30	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.003;DP=875;FS=6.358;HRun=0;HaplotypeScore=301.2359;InbreedingCoeff=0.5739;MQ=57.74;MQ0=15;MQRankSum=-2.390;QD=3.98;ReadPosRankSum=-1.454;VQSLOD=1.5597;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,112,3431	0/0:9,0:9:21.07:0,21,602	0/0:58,0:16:5.34:0,5,40	0/0:61,0:13:2.99:0,3,32	0/0:11,23:40:0.88:0,1,2	0/0:26,0:26:42.14:0,42,1345	0/0:30,0:30:42.09:0,42,1004	0/0:42,0:42:27.06:0,27,365	0/0:27,0:27:48.16:0,48,1669	0/0:31,0:31:51.17:0,51,1761	0/0:16,0:16:33.11:0,33,977	0/0:28,0:28:63.20:0,63,2035	0/0:21,0:21:33.11:0,33,1053	1/1:13,9:31:3.01:200,3,0	0/0:27,0:27:51.17:0,51,1587	0/0:15,0:15:30.09:0,30,960	0/0:38,0:38:72.21:0,72,2460	0/0:25,0:25:54.10:0,54,1435	0/0:30,0:30:30.06:0,30,1045	0/0:27,0:27:51.18:0,51,1611	0/0:59,0:59:90.29:0,90,2678	0/0:31,0:31:48.16:0,48,1540	0/0:23,0:23:48.15:0,48,1508	0/0:32,0:32:81.24:0,81,2568	0/0:21,0:21:39.10:0,39,1413	0/0:27,0:27:54.19:0,54,1818	0/0:29,0:29:54.19:0,54,1657	0/0:16,0:16:29.54:0,30,1014
chr10	74321116	.	C	CAAAA	2020.10	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=7.756;DP=363;FS=0.000;HRun=9;HaplotypeScore=89.0833;InbreedingCoeff=0.6474;MQ=76.03;MQ0=1;MQRankSum=-7.127;QD=13.65;ReadPosRankSum=-2.033;VQSLOD=-0.5295;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:11.88:106,12,0	0/0:10,0:10:18.01:0,18,243	0/0:23,0:20:35.83:0,36,425	0/0:17,0:10:16.82:0,17,146	0/0:12,0:13:27.48:0,27,320	0/0:18,0:18:51.07:0,51,678	0/0:4,0:4:12.03:0,12,157	0/1:36,0:36:96.17:96,0,184	1/1:8,1:9:21.06:403,21,0	0/1:11,0:11:14.16:14,0,30	0/1:14,0:14:19.33:39,0,19	1/1:11,2:14:21.50:411,21,0	1/1:7,5:12:27.05:515,27,0	0/0:9,0:9:20.98:0,21,208	0/0:11,0:11:14.96:0,15,163	0/0:12,0:12:33.06:0,33,407	0/0:23,0:23:47.92:0,48,674	1/1:9,0:9:7.86:185,8,0	0/0:21,0:21:42.02:0,42,502	0/0:9,0:9:17.86:0,18,214	0/0:13,0:13:23.99:0,24,292	1/1:3,6:9:17.85:172,18,0	1/1:10,0:10:11.94:104,12,0	1/1:2,1:3:8.98:118,9,0	0/1:10,0:10:18.13:59,0,18	0/0:13,0:13:23.93:0,24,420	0/0:9,0:9:23.96:0,24,284	0/0:10,0:10:30.02:0,30,357
chr10	74321122	.	A	AT	2633.94	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.571;DP=316;FS=16.135;HRun=0;HaplotypeScore=61.8657;InbreedingCoeff=0.9429;MQ=67.78;MQ0=1;MQRankSum=-5.225;QD=31.36;ReadPosRankSum=-3.106;VQSLOD=1.6911;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:13.33:0,13,70	0/0:7,0:7:21.06:0,21,278	0/0:21,1:17:18.32:0,18,477	0/0:14,0:6:18.06:0,18,240	0/0:11,0:11:25.97:0,26,395	0/0:18,0:18:54.17:0,54,738	0/0:4,0:4:12.04:0,12,168	1/1:16,28:43:99:1526,129,0	0/0:8,0:8:23.82:0,24,193	1/1:1,6:7:21.06:280,21,0	1/1:2,8:10:27.08:355,27,0	0/0:10,0:10:10.63:0,11,172	0/0:10,0:10:18.85:0,19,170	0/0:7,0:7:21.07:0,21,293	0/0:6,0:6:18.05:0,18,237	0/0:12,0:12:36.11:0,36,486	0/0:20,0:20:54.64:0,55,737	1/1:1,3:9:26.93:259,27,0	0/0:15,0:15:45.14:0,45,611	0/0:6,0:6:18.06:0,18,251	0/0:10,0:10:27.07:0,27,359	0/0:7,0:7:17.85:0,18,154	0/0:6,0:6:13.09:0,13,99	0/0:3,0:3:8.46:0,8,53	1/1:6,6:13:38.75:389,39,0	0/0:12,0:12:36.10:0,36,484	0/0:8,0:8:24.08:0,24,334	0/0:10,0:10:30.10:0,30,419
chr10	74321140	.	A	AAT	1475.67	PASS	AB=0.863;AC=13;AF=0.232;AN=56;BaseQRankSum=9.059;DP=278;FS=10.417;HRun=0;HaplotypeScore=61.4270;InbreedingCoeff=0.3143;MQ=57.80;MQ0=1;MQRankSum=-7.448;QD=13.18;ReadPosRankSum=-0.865;VQSLOD=1.8954;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:3:9:82,9,0	0/0:6,0:6:18.05:0,18,256	0/0:14,0:10:22.42:0,22,280	0/0:9,0:3:5.38:0,5,37	0/0:11,0:11:33.11:0,33,500	0/0:19,0:19:54.17:0,54,806	0/0:4,0:4:9.03:0,9,136	0/1:37,4:39:99:528,0,760	1/1:6,0:7:1.18:73,1,0	0/1:5,1:6:99:133,0,119	0/1:5,3:8:23.24:260,0,23	1/1:6,0:8:9.58:121,10,0	1/1:5,0:10:16.39:176,16,0	0/0:3,0:3:6.02:0,6,91	0/0:3,0:3:9.03:0,9,138	0/0:9,0:9:27.08:0,27,394	0/0:20,0:20:57.18:0,57,849	0/1:11,1:12:68:68,0,139	0/0:14,0:14:39.12:0,39,576	0/0:4,0:4:12.04:0,12,183	0/0:5,0:5:15.05:0,15,228	0/0:2,0:2:2.68:0,3,11	0/0:2,0:2:3.01:0,3,45	0/0:3,0:3:0.88:0,1,2	0/1:15,2:17:99:191,0,402	0/0:14,0:14:42.12:0,42,598	0/0:13,0:13:39.12:0,39,565	0/0:11,0:11:33.10:0,33,484
chr10	74321147	.	A	AT	153.02	PASS	AB=0.876;AC=6;AF=0.107;AN=56;BaseQRankSum=4.771;DP=269;FS=13.846;HRun=0;HaplotypeScore=58.5536;InbreedingCoeff=-0.1310;MQ=63.26;MQ0=0;MQRankSum=-5.514;QD=2.64;ReadPosRankSum=0.197;VQSLOD=1.0999;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:8.38:0,8,64	0/0:8,0:8:24.05:0,24,288	0/0:11,0:8:17.88:0,18,195	0/1:10,0:5:4.33:4,0,99	0/0:10,0:10:30.10:0,30,419	0/0:17,0:17:51.16:0,51,696	0/0:5,0:5:15.02:0,15,176	0/0:38,0:36:89.93:0,90,1176	0/0:9,0:9:13.24:0,13,140	0/1:6,0:6:0.26:0,0,113	0/1:2,4:6:64.17:148,0,64	0/0:6,0:6:13.23:0,13,97	0/1:8,1:9:19.22:19,0,182	0/0:2,0:2:6.02:0,6,83	0/0:3,0:3:9.03:0,9,126	0/0:9,0:9:27.08:0,27,362	0/0:20,0:20:57.19:0,57,797	0/1:10,1:11:6.96:7,0,381	0/0:18,0:18:42.14:0,42,587	0/0:4,0:4:12.02:0,12,138	0/0:4,0:4:12.03:0,12,153	0/0:2,0:2:5.98:0,6,62	0/0:2,0:2:2.94:0,3,27	0/0:3,0:3:6.02:0,6,83	0/1:13,3:16:80.41:80,0,440	0/0:11,0:11:33.11:0,33,461	0/0:13,0:13:36.12:0,36,502	0/0:12,0:12:36.12:0,36,497
chr10	74321155	.	TA	T	1941.92	PASS	AB=0.636;AC=9;AF=0.161;AN=56;BaseQRankSum=6.124;DP=277;FS=4.358;HRun=4;HaplotypeScore=47.1693;InbreedingCoeff=0.7043;MQ=69.37;MQ0=0;MQRankSum=-2.092;QD=24.27;ReadPosRankSum=0.059;VQSLOD=2.2693;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:21.03:0,21,271	0/0:5,0:5:15.05:0,15,210	0/0:11,0:8:20.06:0,20,214	0/0:10,0:5:1.73:0,2,155	0/0:10,0:10:30.10:0,30,420	0/0:18,0:18:48.15:0,48,654	0/0:6,0:6:18.06:0,18,250	1/1:7,28:34:80.45:960,80,0	0/0:5,0:5:12.01:0,12,147	1/1:0,7:7:21.06:250,21,0	0/1:3,4:7:15.43:59,0,15	0/0:5,0:5:14.99:0,15,163	0/0:11,0:11:29.25:0,29,305	0/0:3,0:3:9.03:0,9,123	0/0:3,0:3:9.03:0,9,126	0/0:8,0:8:24.08:0,24,335	0/0:20,0:20:57.16:0,57,772	1/1:1,12:13:32.69:369,33,0	0/0:19,0:19:57.19:0,57,798	0/0:6,0:6:18.06:0,18,252	0/0:3,0:3:9.03:0,9,126	0/0:2,0:2:6.01:0,6,67	0/0:1,0:1:3.01:0,3,42	0/0:4,0:4:9.02:0,9,116	1/1:3,15:18:38.99:466,39,0	0/0:13,0:13:36.12:0,36,502	0/0:14,0:14:42.14:0,42,585	0/0:13,0:13:39.13:0,39,546
chr10	74321414	.	CG	C	7344.70	PASS	AB=0.933;AC=25;AF=0.446;AN=56;BaseQRankSum=16.186;DP=717;FS=7.390;HRun=1;HaplotypeScore=136.2742;InbreedingCoeff=0.8884;MQ=68.38;MQ0=4;MQRankSum=-7.609;QD=27.61;ReadPosRankSum=1.162;VQSLOD=4.2103;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:33:41.57:686,42,0	0/0:8,0:8:24.08:0,24,383	0/0:43,0:35:99:0,99,1527	0/0:30,0:22:63.16:0,63,902	0/0:19,0:19:57.18:0,57,868	0/0:21,0:21:60.14:0,60,904	0/0:34,1:35:76.64:0,77,1525	1/1:1,24:24:66.20:904,66,0	1/1:1,23:24:60.20:837,60,0	1/1:1,20:21:60.19:823,60,0	1/1:0,5:5:3.01:42,3,0	1/1:0,38:38:96.18:1272,96,0	1/1:0,24:24:69.66:942,70,0	0/0:26,0:26:78.27:0,78,1243	0/0:24,0:24:69.22:0,69,1078	0/0:30,0:30:90.24:0,90,1317	0/0:30,0:29:84.28:0,84,1314	1/1:3,13:16:0.08:480,0,0	0/0:29,0:29:87.29:0,87,1351	0/0:9,0:9:27.09:0,27,430	0/0:101,0:101:99:0,295,4587	1/1:1,13:14:27.09:374,27,0	1/1:1,5:6:15.05:210,15,0	1/1:0,21:21:38.95:523,39,0	1/1:0,10:10:20.98:249,21,0	0/1:26,2:28:2.72:3,0,1064	0/0:29,0:29:87.27:0,87,1363	0/0:17,0:17:51.17:0,51,814
chr10	74321425	.	A	ACG	1559.13	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=6.535;DP=742;FS=4.090;HRun=0;HaplotypeScore=187.1926;InbreedingCoeff=0.5537;MQ=58.49;MQ0=7;MQRankSum=-5.562;QD=14.17;ReadPosRankSum=-2.877;VQSLOD=2.7458;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:41.08:0,41,393	0/0:8,0:8:21:0,21,273	0/0:43,0:31:65.47:0,65,1004	0/0:28,0:20:28.84:0,29,523	0/0:18,0:18:48.11:0,48,631	0/0:23,0:23:66.18:0,66,890	0/0:32,0:32:90.17:0,90,1184	0/1:27,0:26:99:170,0,122	0/0:30,0:30:57.11:0,57,656	1/1:12,11:23:63.17:1059,63,0	1/1:2,4:6:5.99:66,6,0	0/0:34,0:34:78.01:0,78,889	0/0:32,0:32:80.49:0,80,891	0/0:30,0:29:87.06:0,87,1101	0/0:21,0:21:60.16:0,60,802	0/0:30,0:30:84.24:0,84,1148	0/0:30,0:29:72.24:0,72,1026	0/1:15,0:15:48.45:106,0,48	0/0:24,0:23:63.09:0,63,747	0/0:11,0:10:24:0,24,283	0/0:106,0:105:99:0,283,3876	0/0:15,0:15:26.99:0,27,289	0/0:6,0:6:9.03:0,9,120	0/0:28,0:28:39.05:0,39,443	1/1:4,8:12:17.98:258,18,0	0/1:27,0:27:51.27:51,0,841	0/0:26,0:26:78.23:0,78,1094	0/0:15,0:15:39.13:0,39,553
chr10	74321427	.	G	GCA	1505.55	PASS	AB=0.961;AC=11;AF=0.196;AN=56;BaseQRankSum=8.462;DP=760;FS=0.000;HRun=0;HaplotypeScore=191.0786;InbreedingCoeff=0.6045;MQ=57.46;MQ0=7;MQRankSum=-6.040;QD=9.41;ReadPosRankSum=-3.914;VQSLOD=2.7129;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:46,0:45:75.10:75,0,95	0/0:8,0:8:18.02:0,18,210	0/0:40,2:30:24.52:0,25,677	0/1:26,4:21:44.07:44,0,433	0/0:17,0:17:42.13:0,42,529	0/0:24,0:24:62.67:0,63,757	0/0:37,0:37:81.19:0,81,970	1/1:26,2:27:16.29:473,16,0	0/0:31,0:31:41.19:0,41,287	1/1:23,0:23:41.05:615,41,0	1/1:6,0:6:2.99:25,3,0	0/0:34,0:34:58.75:0,59,421	0/0:33,0:33:55.78:0,56,427	0/0:33,0:32:75.15:0,75,891	0/0:23,0:23:51.16:0,51,648	0/0:30,0:30:75.24:0,75,953	0/0:31,0:30:75.18:0,75,932	1/1:11,4:15:18.06:304,18,0	0/0:25,0:24:42.12:0,42,517	0/0:11,0:10:15.05:0,15,191	0/0:104,0:103:99:0,274,3322	0/0:15,0:15:14.75:0,15,106	0/0:6,0:6:8.92:0,9,63	0/0:28,0:28:25.93:0,26,177	0/1:12,0:12:5.87:133,0,6	0/0:27,0:27:6.55:0,7,675	0/0:25,0:26:78.08:0,78,960	0/0:15,0:15:39.12:0,39,496
chr10	74321437	.	ACG	A	2294.99	PASS	AB=0.975;AC=15;AF=0.268;AN=56;BaseQRankSum=15.842;DP=766;FS=12.371;HRun=0;HaplotypeScore=184.2638;InbreedingCoeff=0.7344;MQ=52.14;MQ0=8;MQRankSum=-5.370;QD=9.81;ReadPosRankSum=-0.833;VQSLOD=2.3422;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:42,2:43:46.91:182,0,47	0/0:7,0:7:20.97:0,21,326	0/0:40,0:25:71.32:0,71,909	0/0:37,0:28:13.59:0,14,781	0/0:19,0:19:54.01:0,54,827	0/0:27,0:27:60.80:0,61,1116	0/0:34,0:34:99:0,99,1587	0/1:29,1:29:2.29:223,0,2	1/1:29,1:30:47.75:371,48,0	0/0:24,0:24:21.52:0,22,803	0/0:6,0:6:5.88:0,6,62	1/1:30,3:33:68.09:541,68,0	1/1:29,2:32:68.72:511,69,0	0/0:32,0:31:90.12:0,90,1438	0/0:20,0:20:57.20:0,57,1068	0/0:27,0:27:81.21:0,81,1420	0/0:36,0:35:86.17:0,86,1429	0/1:15,0:15:12.19:107,0,12	0/0:23,0:22:62.72:0,63,850	0/0:10,0:9:20.99:0,21,321	0/0:111,0:109:99:0,309,5110	1/1:16,0:16:26.71:189,27,0	1/1:5,2:7:8.93:62,9,0	1/1:26,1:27:36.03:300,36,0	0/0:10,0:10:14.72:0,15,179	0/0:25,0:25:60.17:0,60,1120	0/0:29,0:29:50.57:0,51,1426	0/0:15,0:15:42.99:0,43,770
chr10	74321447	.	ACGCG	A	4434.27	PASS	AB=0.906;AC=16;AF=0.286;AN=56;BaseQRankSum=14.107;DP=763;FS=13.865;HRun=0;HaplotypeScore=195.5614;InbreedingCoeff=0.8563;MQ=54.56;MQ0=6;MQRankSum=-9.423;QD=18.63;ReadPosRankSum=0.053;VQSLOD=3.4098;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,10:42:99:255,0,139	0/0:9,0:9:27.09:0,27,672	0/0:34,0:20:54.14:0,54,1079	0/0:38,0:32:39.74:0,40,1584	0/0:19,0:19:51.13:0,51,1329	0/0:21,0:21:63.20:0,63,1661	0/0:32,0:32:96.24:0,96,2229	1/1:13,13:26:68.52:1030,69,0	1/1:31,0:31:37.22:437,37,0	0/0:21,0:21:63.12:0,63,1493	0/0:9,0:9:15.05:0,15,381	1/1:35,0:35:51.80:817,52,0	1/1:36,0:36:63.82:799,64,0	0/0:30,0:29:84.27:0,84,2209	0/0:26,0:26:75.25:0,75,1775	0/0:28,0:28:81.22:0,81,1923	0/0:38,0:38:99:0,99,2417	1/1:11,5:16:32.76:479,33,0	0/0:22,0:21:63.14:0,63,1378	0/0:13,0:12:33.11:0,33,716	0/0:106,0:104:99:0,298,7313	0/1:14,0:14:0.10:182,0,0	1/1:8,0:8:9.03:125,9,0	1/1:28,0:28:27.94:312,28,0	0/0:11,0:11:18.06:0,18,458	0/0:21,0:21:60.21:0,60,1600	0/0:31,0:31:93.32:0,93,2291	0/0:16,0:16:48.16:0,48,1306
chr10	74321449	.	GCGCA	G	4951.93	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=14.369;DP=763;FS=7.413;HRun=0;HaplotypeScore=193.1304;InbreedingCoeff=0.8103;MQ=56.92;MQ0=6;MQRankSum=-8.578;QD=20.89;ReadPosRankSum=-1.257;VQSLOD=3.6020;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:43:82.33:185,0,82	0/0:10,0:10:30.10:0,30,773	0/0:33,0:19:47.49:0,47,985	0/0:36,0:31:82.07:0,82,1794	0/0:18,0:18:48.16:0,48,1294	0/0:21,0:21:60.19:0,60,1583	0/0:36,0:36:99:0,102,2409	1/1:27,0:26:41.94:563,42,0	1/1:5,26:31:42.06:647,42,0	0/0:21,0:21:56.86:0,57,1421	0/0:9,0:9:15.05:0,15,406	1/1:17,18:35:75.19:1264,75,0	1/1:7,29:36:65.56:1065,66,0	0/0:31,0:30:87.30:0,87,2319	0/0:26,0:26:75.06:0,75,1774	0/0:27,0:27:78.18:0,78,1903	0/0:36,0:36:99:0,99,2433	0/1:15,0:17:25.92:217,0,26	0/0:22,0:21:59.47:0,59,1329	0/0:13,0:12:33.06:0,33,774	0/0:105,0:103:99:0,289,7181	1/1:4,8:12:18.04:310,18,0	1/1:0,8:8:9.03:179,9,0	1/1:13,14:27:32.23:523,32,0	0/0:13,0:13:24.08:0,24,621	0/0:21,0:21:63.21:0,63,1592	0/0:31,0:31:93.20:0,93,2272	0/0:16,0:16:48.16:0,48,1332
chr10	74321738	.	AC	A	1482.93	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.636;DP=618;FS=3.427;HRun=5;HaplotypeScore=62.3919;InbreedingCoeff=0.9950;MQ=80.73;MQ0=1;MQRankSum=-1.052;QD=27.46;ReadPosRankSum=0.580;VQSLOD=3.6061;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:87.26:0,87,1156	0/0:12,0:12:36.12:0,36,491	0/0:25,0:25:69.20:0,69,866	0/0:22,0:20:48.13:0,48,614	0/0:25,0:25:72.23:0,72,969	0/0:25,0:25:72.22:0,72,953	0/0:23,0:23:60.17:0,60,786	0/0:39,0:39:99:0,105,1409	0/0:12,0:12:36.12:0,36,491	1/1:0,26:26:75.14:809,75,0	1/1:0,10:10:21.06:238,21,0	0/0:17,0:17:51.14:0,51,664	0/0:31,0:31:87.18:0,87,1115	0/0:30,0:30:84.27:0,84,1130	0/0:26,0:26:75.22:0,75,993	0/0:25,0:25:72.24:0,72,985	0/0:26,0:26:75.22:0,75,994	0/0:16,0:15:45.09:0,45,578	0/0:14,0:14:42.14:0,42,572	0/0:29,0:29:87.26:0,87,1152	0/0:26,0:26:69.21:0,69,910	0/0:20,0:20:57.19:0,57,778	0/0:11,0:11:30.09:0,30,394	0/0:26,0:26:72.22:0,72,959	1/1:1,17:18:51.14:578,51,0	0/0:17,1:18:20.12:0,20,622	0/0:23,0:23:68.97:0,69,851	0/0:7,0:7:21.07:0,21,287
chr10	74325333	.	AT	A	3820.96	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.691;DP=493;FS=2.238;HRun=7;HaplotypeScore=67.4791;InbreedingCoeff=0.9903;MQ=62.87;MQ0=0;MQRankSum=-6.391;QD=27.89;ReadPosRankSum=1.403;VQSLOD=4.5007;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:39.09:397,39,0	0/0:12,0:12:36.12:0,36,453	0/0:7,0:7:15.03:0,15,169	0/0:6,0:6:14.25:0,14,150	0/0:34,0:34:90.28:0,90,1120	0/0:14,0:14:36.12:0,36,453	0/0:14,0:14:30.10:0,30,377	0/0:28,0:28:81.25:0,81,1008	1/1:0,6:6:18.04:182,18,0	1/1:0,12:12:36.08:367,36,0	1/1:0,12:12:33.07:336,33,0	1/1:1,11:12:33.08:336,33,0	1/1:1,18:19:51.12:520,51,0	0/0:16,0:16:45.14:0,45,566	0/0:27,0:27:66.21:0,66,830	0/0:13,0:13:36.12:0,36,453	0/0:28,0:28:72.23:0,72,906	0/0:19,0:19:51.15:0,51,628	0/0:27,0:27:66.21:0,66,831	0/0:21,0:21:60.19:0,60,753	0/0:5,0:5:15.05:0,15,189	1/1:1,7:8:21.05:214,21,0	1/1:2,22:24:66.15:673,66,0	1/1:0,9:9:27.06:275,27,0	1/1:1,19:20:51.12:520,51,0	0/0:35,0:35:96.24:0,96,1188	0/0:33,0:33:87.28:0,87,1094	0/0:17,0:17:48.15:0,48,604
chr10	74325443	.	A	AAGATACCAAAGGCACACTATT	15729.10	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=2.241;DP=497;FS=42.111;HRun=0;HaplotypeScore=270.9978;InbreedingCoeff=0.8567;MQ=80.13;MQ0=0;MQRankSum=-13.426;QD=115.66;ReadPosRankSum=0.977;VQSLOD=3.1457;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,2:15:26.94:1482,27,0	0/0:10,0:10:30.10:0,30,1581	0/0:17,0:17:39:0,39,1722	0/0:13,0:13:27.06:0,27,793	0/0:35,0:35:99:0,105,5023	0/0:12,0:12:33.09:0,33,1635	0/0:14,0:14:42.13:0,42,1807	0/0:31,0:31:90.28:0,90,3810	1/1:5,5:11:26.97:1680,27,0	1/1:4,5:12:38.80:2967,39,0	1/1:0,1:2:3.01:306,3,0	1/1:9,4:17:39.02:2546,39,0	1/1:9,7:20:48.01:3138,48,0	0/0:20,0:20:60.17:0,60,3051	0/0:23,0:21:66.21:0,66,3475	0/0:19,0:19:57.16:0,57,2635	0/0:30,0:30:87.23:0,87,4218	0/0:22,0:22:57.14:0,57,3018	0/0:31,0:31:91.52:0,92,4358	0/0:31,0:31:93.31:0,93,5041	0/0:13,0:13:39.13:0,39,1901	1/1:3,2:6:15.01:878,15,0	1/1:0,5:6:15.05:1532,15,0	1/1:2,1:6:9:470,9,0	1/1:0,1:2:3.01:307,3,0	0/1:38,0:38:99:425,0,4806	0/0:28,0:28:81.26:0,81,4031	0/0:12,0:12:30.10:0,30,1700
chr10	74325492	.	T	TG	1355.74	PASS	AB=0.750;AC=17;AF=0.315;AN=54;BaseQRankSum=14.143;DP=546;FS=36.270;HRun=1;HaplotypeScore=104.1881;InbreedingCoeff=0.9269;MQ=91.06;MQ0=0;MQRankSum=-14.204;QD=13.29;ReadPosRankSum=3.137;VQSLOD=0.9785;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:18:41.45:313,41,0	0/0:11,0:11:33.11:0,33,428	0/0:28,0:28:81.26:0,81,1051	0/0:27,0:26:66.15:0,66,793	0/0:24,0:24:69.22:0,69,896	0/0:9,0:9:27.09:0,27,351	0/0:17,0:17:51.10:0,51,641	0/0:35,0:35:99:0,105,1364	1/1:1,13:14:35.49:229,35,0	1/1:1,5:6:14.05:134,14,0	0/1:2,1:3:0.63:11,0,1	1/1:4,15:19:45.90:293,46,0	1/1:7,21:28:50.17:399,50,0	0/0:19,0:19:54.18:0,54,701	0/0:23,0:23:63.20:0,63,818	0/0:32,0:32:96.31:0,96,1247	0/0:33,0:33:90.29:0,90,1169	0/0:20,0:20:54.18:0,54,701	0/0:19,0:19:57.16:0,57,711	0/0:34,0:34:99:0,102,1324	0/0:39,0:39:99:0,111,1441	1/1:1,3:4:8.83:54,9,0	./.	1/1:2,4:6:8.73:49,9,0	1/1:0,4:4:11.78:72,12,0	0/0:34,1:35:40.41:0,40,1213	0/0:29,0:28:84.27:0,84,1086	0/0:10,0:10:30.10:0,30,390
chr10	74325604	.	AT	A	8062.68	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=19.402;DP=722;FS=5.130;HRun=1;HaplotypeScore=109.6275;InbreedingCoeff=0.9813;MQ=89.34;MQ0=0;MQRankSum=-10.017;QD=35.06;ReadPosRankSum=4.029;VQSLOD=4.6322;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,62:62:99:2013,144,0	0/0:15,0:15:45.15:0,45,716	0/0:26,0:26:78.26:0,78,1213	0/0:34,0:34:96.26:0,96,1471	0/0:36,0:36:99:0,108,1725	0/0:17,0:17:48.16:0,48,767	0/0:31,0:31:90.27:0,90,1385	0/0:33,0:33:93.31:0,93,1465	1/1:0,19:19:54.18:754,54,0	1/1:0,21:21:57.19:794,57,0	1/1:0,9:9:18.06:251,18,0	1/1:0,29:29:75.25:1046,75,0	1/1:0,46:46:99:1695,123,0	0/0:28,0:28:81.25:0,81,1246	0/0:36,0:35:99:0,108,1678	0/0:26,0:26:78.27:0,78,1247	0/0:22,0:22:66.19:0,66,1007	0/0:25,0:25:75.23:0,75,1174	0/0:24,0:24:72.07:0,72,1098	0/0:26,0:26:78.27:0,78,1245	0/0:46,0:46:99:0,135,2108	1/1:0,5:5:6.02:84,6,0	1/1:0,13:13:30.10:419,30,0	1/1:0,16:16:42.14:587,42,0	1/1:0,10:10:30.10:419,30,0	0/0:32,2:34:18.54:0,19,1430	0/0:26,0:25:78.27:0,78,1230	0/0:7,0:7:21.07:0,21,336
chr10	74325784	.	T	TA	693.45	PASS	AB=0.762;AC=14;AF=0.250;AN=56;BaseQRankSum=10.068;DP=428;FS=10.319;HRun=0;HaplotypeScore=75.1599;InbreedingCoeff=0.6807;MQ=76.71;MQ0=0;MQRankSum=-8.025;QD=12.17;ReadPosRankSum=3.054;VQSLOD=3.6860;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,6:9:17.90:133,18,0	0/0:8,0:8:24.08:0,24,335	0/0:8,0:8:24.07:0,24,304	0/0:13,0:13:36.03:0,36,409	0/0:34,0:34:99:0,99,1338	0/0:21,0:21:63.17:0,63,858	0/0:21,0:21:63.20:0,63,865	0/0:25,0:25:75.25:0,75,1034	0/1:5,5:10:28.06:129,0,28	1/1:2,6:13:29.90:247,30,0	0/1:5,1:6:13.03:13,0,35	1/1:1,4:5:14.93:114,15,0	1/1:2,9:11:16.17:187,16,0	0/0:17,0:17:48.14:0,48,638	0/0:26,0:26:78.21:0,78,1011	0/0:16,0:16:45.15:0,45,629	0/0:15,0:15:45.14:0,45,612	0/0:18,0:18:54.10:0,54,694	0/0:27,0:27:79.11:0,79,1057	0/0:32,0:32:93.28:0,93,1250	0/0:17,0:17:48.14:0,48,640	0/0:1,0:1:2.37:0,2,8	1/1:0,0:1:2.99:23,3,0	0/0:1,0:1:2.98:0,3,22	1/1:1,1:2:2.99:23,3,0	0/0:28,0:28:84.24:0,84,1112	0/0:28,0:27:84.27:0,84,1148	0/0:15,0:15:42.13:0,42,569
chr10	74325785	.	T	TGAAAAATATATTGA	7609.95	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=10.195;DP=437;FS=17.052;HRun=0;HaplotypeScore=170.7291;InbreedingCoeff=0.8786;MQ=76.28;MQ0=0;MQRankSum=-9.802;QD=120.79;ReadPosRankSum=2.174;VQSLOD=3.6868;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,6:11:21.07:1349,21,0	0/0:8,0:8:24.08:0,24,1050	0/0:8,0:8:23.71:0,24,616	0/0:13,0:13:33.02:0,33,711	0/0:33,0:33:99:0,99,3938	0/0:21,0:21:63.21:0,63,2471	0/0:23,0:23:63.20:0,63,2509	0/0:25,0:25:75.25:0,75,2877	1/1:5,5:10:30.07:1464,30,0	1/1:8,6:14:8.40:1224,8,0	1/1:4,1:5:9.03:432,9,0	1/1:1,4:5:12.93:774,13,0	1/1:4,9:13:33.11:1970,33,0	0/0:18,0:18:48.16:0,48,1923	0/0:26,0:26:78.24:0,78,2904	0/0:17,0:17:48.16:0,48,1969	0/0:15,0:15:45.15:0,45,1904	0/0:18,0:18:51.17:0,51,2035	0/0:29,0:29:81.22:0,81,3057	0/0:31,0:31:93.31:0,93,3758	0/0:18,0:18:48.14:0,48,1869	1/1:1,0:1:3.01:88,3,0	1/1:1,0:1:2.97:20,3,0	1/1:2,0:2:6.01:97,6,0	1/1:0,1:1:3.01:193,3,0	0/0:27,0:27:81.28:0,81,3309	0/0:29,0:28:84.26:0,84,2882	0/0:15,0:15:42.14:0,42,1721
chr10	74326013	.	G	GACAATATAT	7665.45	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=11.770;DP=402;FS=0.000;HRun=0;HaplotypeScore=138.0767;InbreedingCoeff=0.9062;MQ=80.10;MQ0=0;MQRankSum=-11.681;QD=116.14;ReadPosRankSum=0.824;VQSLOD=5.5408;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,2:3:9.03:362,9,0	0/0:8,0:8:21.07:0,21,615	0/0:11,0:11:33.10:0,33,869	0/0:11,0:11:24.08:0,24,719	0/0:29,0:29:81.26:0,81,2373	0/0:28,0:28:78.26:0,78,2194	0/0:4,0:4:12.04:0,12,364	0/0:42,0:42:99:0,123,3272	1/1:4,6:10:24.08:1085,24,0	1/1:7,3:10:27.09:1191,27,0	1/1:5,9:14:36.12:1725,36,0	1/1:1,6:7:21.07:1010,21,0	1/1:4,6:10:26.94:1285,27,0	0/0:11,0:11:33.11:0,33,954	0/0:17,0:17:42.14:0,42,1273	0/0:16,0:16:48.16:0,48,1401	0/0:16,0:16:45.15:0,45,1340	0/0:21,0:21:57.20:0,57,1686	0/0:17,0:17:48.16:0,48,1423	0/0:23,0:23:63.20:0,63,1844	0/0:13,0:13:33.10:0,33,933	1/1:1,0:1:3.01:144,3,0	1/1:4,2:6:9.03:432,9,0	1/1:2,1:3:3.01:144,3,0	1/1:1,1:2:6.02:289,6,0	0/0:19,0:19:57.20:0,57,1725	0/0:36,0:36:99:0,102,3034	0/0:14,0:14:36.12:0,36,1078
chr10	74326042	.	C	CA	1695.85	PASS	AB=0.929;AC=19;AF=0.352;AN=54;BaseQRankSum=10.538;DP=339;FS=3.816;HRun=2;HaplotypeScore=54.2974;InbreedingCoeff=0.8575;MQ=78.64;MQ0=0;MQRankSum=-10.484;QD=27.35;ReadPosRankSum=1.326;VQSLOD=3.2376;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:4:9.03:129,9,0	0/0:4,0:4:12.04:0,12,149	0/0:8,0:8:24.03:0,24,256	0/0:9,0:9:21.06:0,21,245	0/0:26,0:26:72.23:0,72,893	0/0:25,0:25:75.24:0,75,929	0/0:5,0:5:15.05:0,15,186	0/0:29,0:29:78.24:0,78,956	1/1:1,8:9:21.07:302,21,0	1/1:0,7:7:21.07:302,21,0	1/1:0,9:9:24.08:345,24,0	1/1:0,6:6:18.06:259,18,0	1/1:0,9:9:24.08:337,24,0	0/0:8,0:8:24.08:0,24,298	0/0:13,0:13:36.11:0,36,446	0/1:12,1:13:4.02:4,0,407	0/0:17,0:17:48.15:0,48,595	0/0:22,0:22:63.17:0,63,754	0/0:13,0:13:36.11:0,36,445	0/0:23,0:23:63.18:0,63,768	0/0:10,0:10:27.07:0,27,321	1/1:0,1:1:3.01:43,3,0	1/1:0,2:2:6.02:86,6,0	./.	1/1:0,2:2:6.02:86,6,0	0/0:17,0:17:51.16:0,51,632	0/0:36,0:36:99:0,108,1339	0/0:11,0:11:33.10:0,33,409
chr10	74326087	.	T	TTTATATTAAAGTTACATTAAAG	8922.49	PASS	AB=1.000;AC=20;AF=0.370;AN=54;BaseQRankSum=6.756;DP=342;FS=9.126;HRun=0;HaplotypeScore=201.7922;InbreedingCoeff=0.7165;MQ=69.85;MQ0=0;MQRankSum=-9.540;QD=117.40;ReadPosRankSum=1.110;VQSLOD=3.2197;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,1:6:12.04:976,12,0	0/0:2,0:2:3.01:0,3,115	0/1:8,0:8:8:8,0,179	0/0:4,0:4:8.82:0,9,91	0/0:33,0:33:84.29:0,84,4260	0/0:22,0:22:63.22:0,63,3371	0/0:7,0:7:18.06:0,18,917	0/0:28,0:28:39.11:0,39,1626	1/1:5,0:5:9.03:639,9,0	1/1:8,0:8:15.05:1055,15,0	1/1:9,2:11:27.09:2131,27,0	1/1:5,0:5:12.04:890,12,0	1/1:6,0:6:6.02:369,6,0	0/0:9,0:9:24.08:0,24,1381	0/0:14,0:14:30.10:0,30,1631	0/1:13,0:13:99:157,0,1441	0/0:17,0:17:45.15:0,45,2348	0/0:25,0:25:60.21:0,60,3161	0/0:15,0:15:18.05:0,18,859	0/0:24,0:24:69.22:0,69,3173	0/0:7,0:7:15.04:0,15,688	./.	1/1:2,1:3:3.01:308,3,0	1/1:1,0:1:3.01:205,3,0	1/1:7,3:10:27.09:2186,27,0	0/0:16,0:16:42.12:0,42,2008	0/0:33,0:33:81.21:0,81,3731	0/0:9,0:9:24.04:0,24,1025
chr10	74326681	.	T	TTTTTTTC	5624.95	PASS	AB=0.597;AC=18;AF=0.321;AN=56;BaseQRankSum=1.104;DP=479;FS=0.482;HRun=0;HaplotypeScore=113.1047;InbreedingCoeff=0.7898;MQ=58.31;MQ0=15;MQRankSum=-8.161;QD=35.60;ReadPosRankSum=0.261;VQSLOD=4.4899;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:17:11.41:990,11,0	0/0:3,0:2:6.02:0,6,112	0/0:13,0:10:11.39:0,11,163	0/0:6,0:3:2.14:0,2,74	0/0:22,0:22:50.74:0,51,682	0/0:15,0:14:36.08:0,36,651	0/0:11,0:11:31.46:0,31,503	0/0:27,0:27:63:0,63,768	0/1:7,10:16:5.72:533,0,6	1/1:6,15:22:48.32:866,48,0	1/1:10,11:20:33.08:783,33,0	1/1:8,7:14:11.97:309,12,0	1/1:4,9:12:21.07:650,21,0	0/0:17,0:16:38.92:0,39,535	0/0:15,0:14:33.01:0,33,594	0/0:14,0:14:35.98:0,36,516	0/0:37,0:36:87.05:0,87,1457	0/0:26,0:23:65.93:0,66,902	0/0:30,0:29:75.10:0,75,1189	0/0:21,0:21:47.98:0,48,610	0/0:16,0:16:35.99:0,36,564	1/1:2,8:9:15.43:426,15,0	0/1:3,10:13:8.16:303,0,8	1/1:7,8:15:12.01:338,12,0	1/1:4,8:11:14.97:428,15,0	0/0:23,0:23:53.75:0,54,649	0/0:17,0:17:38.88:0,39,447	0/0:8,0:7:11.40:0,11,350
chr10	74327272	.	AT	A	6768.31	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=18.211;DP=626;FS=12.487;HRun=7;HaplotypeScore=99.9445;InbreedingCoeff=0.9897;MQ=77.51;MQ0=0;MQRankSum=-1.595;QD=27.29;ReadPosRankSum=1.864;VQSLOD=4.1639;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:81.18:826,81,0	0/0:6,0:6:18.06:0,18,226	0/0:12,0:12:24.07:0,24,295	0/0:18,0:18:38.88:0,39,392	0/0:23,0:23:66.20:0,66,817	0/0:32,0:32:90.28:0,90,1119	0/0:13,0:13:33.11:0,33,415	0/0:25,0:25:63.19:0,63,782	1/1:0,23:23:66.15:673,66,0	1/1:0,27:27:81.16:814,81,0	1/1:0,26:26:75.13:753,75,0	1/1:0,20:20:57.13:581,57,0	1/1:1,25:26:72.16:734,72,0	0/0:25,0:25:72.22:0,72,892	0/0:24,0:24:69.21:0,69,853	0/0:28,0:28:72.23:0,72,906	0/0:28,0:28:81.26:0,81,1019	0/0:14,0:14:39.11:0,39,477	0/0:18,0:18:54.14:0,54,652	0/0:33,0:32:96.26:0,96,1150	0/0:13,0:13:36.12:0,36,453	1/1:3,20:23:57.13:581,57,0	1/1:1,25:26:69.16:703,69,0	1/1:2,14:16:33.07:337,33,0	1/1:1,28:29:75.17:765,75,0	0/0:29,0:29:81.21:0,81,979	0/0:32,0:31:90.29:0,90,1130	0/0:5,0:5:9.01:0,9,99
chr10	74329427	.	T	TC	1810.38	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.530;DP=509;FS=4.000;HRun=8;HaplotypeScore=49.6276;InbreedingCoeff=0.9840;MQ=69.22;MQ0=0;MQRankSum=0.838;QD=27.02;ReadPosRankSum=0.330;VQSLOD=4.2781;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:45.02:0,45,411	0/0:6,0:6:18.01:0,18,165	0/0:10,0:10:17.97:0,18,158	0/0:6,0:6:15.01:0,15,137	0/0:20,0:20:57.03:0,57,522	0/0:28,0:28:72.03:0,72,659	0/0:10,0:10:24:0,24,220	0/0:37,0:37:93:0,93,836	0/0:24,0:24:66.03:0,66,603	1/1:5,16:22:28.81:560,29,0	1/1:1,24:25:72.21:824,72,0	0/0:20,0:20:51.03:0,51,466	0/0:20,0:20:48.02:0,48,439	0/0:10,0:10:30.02:0,30,275	0/0:19,0:18:57.03:0,57,522	0/0:17,0:17:45.02:0,45,412	0/0:23,0:23:69.04:0,69,631	0/0:15,0:15:39.02:0,39,357	0/0:8,0:8:18.01:0,18,165	0/0:27,0:27:78.04:0,78,714	0/0:17,0:17:48.02:0,48,439	0/0:15,0:15:45.02:0,45,412	0/0:24,0:24:69.04:0,69,631	0/0:11,0:11:33.02:0,33,301	1/1:2,18:20:51.02:569,51,0	0/0:29,1:30:46.40:0,46,675	0/0:16,0:16:42.02:0,42,384	0/0:11,0:11:27.01:0,27,247
chr10	74329569	.	GAC	G	1000.43	PASS	AB=0.876;AC=15;AF=0.268;AN=56;BaseQRankSum=10.280;DP=629;FS=20.334;HRun=0;HaplotypeScore=148.5994;InbreedingCoeff=0.3612;MQ=55.28;MQ0=20;MQRankSum=0.300;QD=3.88;ReadPosRankSum=1.088;VQSLOD=1.5616;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:5,10:15:10.61:52,0,11	0/0:4,0:4:12.04:0,12,244	0/0:58,1:18:47.72:0,48,639	0/1:40,1:20:11.21:11,0,415	0/0:24,0:24:69.22:0,69,1342	0/0:16,0:16:0.79:0,1,752	0/0:17,0:17:45.15:0,45,896	0/0:28,0:27:77.36:0,77,1233	0/1:23,1:24:7.55:20,0,8	0/1:14,10:24:99:349,0,179	1/1:2,18:20:15.03:177,15,0	0/1:27,3:30:14:82,0,14	0/1:26,1:27:6.62:95,0,7	0/0:24,0:24:44.87:0,45,1264	0/0:29,0:29:83.89:0,84,1580	0/0:19,0:19:57.19:0,57,1112	0/0:21,0:21:14.81:0,15,1036	0/0:9,0:9:17.94:0,18,363	0/0:12,0:11:30.08:0,30,523	0/0:7,0:7:21.07:0,21,415	0/0:33,0:33:11.26:0,11,1205	1/1:14,1:15:17.46:106,17,0	1/1:12,0:12:8.12:37,8,0	0/1:27,0:27:10.43:10,0,39	1/1:12,9:22:19.37:235,19,0	0/0:30,1:31:47.40:0,47,1598	0/0:23,0:23:44.85:0,45,1262	0/0:14,0:14:38.08:0,38,707
chr10	74329576	.	A	ACT	3062.20	PASS	AB=0.724;AC=17;AF=0.304;AN=56;BaseQRankSum=12.209;DP=636;FS=14.191;HRun=0;HaplotypeScore=150.3658;InbreedingCoeff=0.7080;MQ=53.76;MQ0=19;MQRankSum=1.240;QD=14.94;ReadPosRankSum=2.238;VQSLOD=3.1844;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,3:16:4.36:36,0,4	0/0:4,0:4:12:0,12,123	0/0:67,0:22:29.87:0,30,453	0/0:44,0:22:36.84:0,37,326	0/0:27,0:27:72:0,72,1001	0/0:16,0:16:44.46:0,44,595	0/0:18,0:18:48.06:0,48,632	0/0:8,0:23:1.21:0,1,308	1/1:2,17:24:15.03:327,15,0	0/1:3,9:22:47.95:360,0,48	1/1:6,11:18:7:30,7,0	1/1:5,20:28:19.88:616,20,0	1/1:11,13:26:60.15:845,60,0	0/0:22,0:23:63.12:0,63,869	0/0:30,0:30:84.24:0,84,1271	0/0:20,0:21:57.13:0,57,807	0/0:24,0:24:63.07:0,63,866	0/0:5,0:10:17.91:0,18,138	0/0:14,0:13:36:0,36,437	0/0:6,0:6:18.03:0,18,243	0/0:30,0:35:78.16:0,78,1046	1/1:6,4:13:16.93:146,17,0	1/1:2,7:11:18.06:332,18,0	0/1:7,17:27:12.14:459,0,12	1/1:3,9:19:10.77:105,11,0	0/0:29,1:31:45.23:0,45,1307	0/0:23,0:23:69.12:0,69,1036	0/0:13,0:14:39.10:0,39,574
chr10	74329622	.	AGTGTGTGTGTGTGTGTGT	A	1646.49	PASS	AB=0.714;AC=15;AF=0.278;AN=54;BaseQRankSum=4.921;DP=572;FS=1.050;HRun=0;HaplotypeScore=256.8469;InbreedingCoeff=0.6171;MQ=50.18;MQ0=22;MQRankSum=-3.715;QD=9.30;ReadPosRankSum=-0.094;VQSLOD=2.5017;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,7:22:3:25,3,0	0/0:6,0:6:12.04:0,12,963	./.	0/0:33,0:11:0:0,0,0	0/0:18,0:18:24.08:0,24,1538	0/0:15,0:15:21.07:0,21,1261	0/0:19,0:22:39.13:0,39,2664	0/0:24,0:23:27.07:0,27,671	1/1:12,5:19:3.27:148,3,0	1/1:9,1:10:3.01:146,3,0	0/0:10,4:15:0.47:0,0,1	1/1:13,6:19:9.02:414,9,0	1/1:12,15:28:21.07:988,21,0	0/0:19,0:18:24.08:0,24,1456	0/0:26,0:25:48.14:0,48,2836	0/0:9,0:19:24.55:0,25,1245	0/0:20,0:20:36.10:0,36,2211	0/0:11,0:13:20.94:0,21,438	0/0:13,0:12:15.05:0,15,1048	0/0:12,0:12:27.09:0,27,1635	0/0:46,0:46:72.20:0,72,4324	1/1:4,7:11:1.19:3,1,0	0/1:8,10:19:0:0,0,0	0/1:19,4:23:65.45:65,0,142	0/1:12,13:25:0:0,0,0	0/0:27,0:28:57.20:0,57,3397	0/0:24,0:27:59.01:0,59,3930	0/0:1,0:2:3.01:0,3,195
chr10	74331629	.	T	TC	1318.42	PASS	AB=0.825;AC=12;AF=0.214;AN=56;BaseQRankSum=13.155;DP=632;FS=0.432;HRun=0;HaplotypeScore=114.0469;InbreedingCoeff=0.7017;MQ=74.02;MQ0=0;MQRankSum=-12.928;QD=8.73;ReadPosRankSum=2.155;VQSLOD=3.4925;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:80.35:0,80,419	0/0:13,0:13:39.13:0,39,545	0/0:30,0:30:87.28:0,87,1195	0/0:20,0:20:60.16:0,60,805	0/0:31,0:31:93.30:0,93,1284	0/0:8,0:8:24.07:0,24,318	0/0:22,0:22:63.21:0,63,881	0/0:27,0:27:81.26:0,81,1117	1/1:7,16:23:38.51:332,39,0	0/1:17,0:17:38.12:38,0,100	0/0:13,0:13:8.68:0,9,131	1/1:10,13:23:18.42:267,18,0	1/1:15,18:33:10.45:333,10,0	0/0:24,0:24:72.24:0,72,1007	0/0:32,0:32:96.31:0,96,1327	0/0:29,0:29:84.27:0,84,1159	0/0:34,0:34:99:0,102,1426	0/0:9,0:9:24.08:0,24,329	0/0:15,0:15:45.15:0,45,629	0/0:21,0:21:60.19:0,60,822	0/0:15,0:15:45.15:0,45,629	0/1:12,14:26:17.11:230,0,17	1/1:6,9:15:4.33:143,4,0	1/1:5,9:14:4.65:142,5,0	0/0:35,0:35:99:0,100,502	0/0:29,0:29:86.79:0,87,1158	0/0:26,0:26:72.24:0,72,1006	0/0:20,0:20:57.19:0,57,790
chr10	74331630	.	T	TACTGCATC	10654.89	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=12.401;DP=627;FS=0.000;HRun=0;HaplotypeScore=176.5618;InbreedingCoeff=0.8828;MQ=74.50;MQ0=0;MQRankSum=-13.531;QD=73.99;ReadPosRankSum=1.229;VQSLOD=4.4339;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.29:0,84,1679	0/0:13,0:13:39.13:0,39,1133	0/0:29,0:29:81.26:0,81,2254	0/0:20,0:20:60.15:0,60,1609	0/0:30,0:30:90.31:0,90,2601	0/0:7,0:7:21.06:0,21,557	0/0:22,0:22:66.18:0,66,1684	0/0:28,0:28:81.25:0,81,1958	1/1:6,16:22:60.21:2181,60,0	0/0:16,0:16:16.98:0,17,671	0/1:12,0:12:13.92:14,0,485	1/1:10,12:23:14.86:1768,15,0	1/1:14,18:32:9.21:2295,9,0	0/0:24,0:24:72.25:0,72,2132	0/0:32,0:32:96.32:0,96,2731	0/0:29,0:29:87.28:0,87,2458	0/0:34,0:34:99:0,102,2901	0/0:9,0:9:27.08:0,27,693	0/0:16,0:16:45.15:0,45,1201	0/0:21,0:21:60.19:0,60,1642	0/0:15,0:15:45.15:0,45,1299	1/1:12,14:26:16.22:1807,16,0	1/1:6,9:15:22.15:1458,22,0	1/1:5,9:14:36.09:1133,36,0	0/0:35,0:35:99:0,105,1979	0/0:29,0:29:87.30:0,87,2472	0/0:26,0:26:78.25:0,78,2166	0/0:20,0:20:60.13:0,60,1454
chr10	74331632	.	A	ACTGCATCT	8693.23	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=14.277;DP=627;FS=1.914;HRun=0;HaplotypeScore=183.9908;InbreedingCoeff=0.8779;MQ=73.84;MQ0=0;MQRankSum=-14.786;QD=64.39;ReadPosRankSum=1.010;VQSLOD=5.0863;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.29:0,84,2357	0/0:12,0:12:36.12:0,36,1018	0/0:29,0:29:81.27:0,81,2105	0/0:19,0:19:53.54:0,54,1298	0/0:30,0:30:84.29:0,84,2336	0/0:7,0:7:21.07:0,21,584	0/0:22,0:22:66.23:0,66,1741	0/0:30,0:30:78.26:0,78,1999	1/1:22,0:22:60.20:1787,60,0	0/0:14,0:14:39.09:0,39,993	0/0:13,0:13:33.06:0,33,747	1/1:24,0:24:29.18:1444,29,0	1/1:28,1:34:16.34:1899,16,0	0/0:25,0:25:72.23:0,72,1978	0/0:32,0:32:96.30:0,96,2557	0/0:27,0:27:81.28:0,81,2215	0/0:34,0:34:99:0,99,2572	0/0:9,0:9:27.09:0,27,653	0/0:14,0:14:42.14:0,42,1080	0/0:21,0:21:57.20:0,57,1589	0/0:16,0:16:45.15:0,45,1263	1/1:26,0:26:9.45:1478,9,0	1/1:15,0:15:40.02:1208,40,0	0/1:14,0:14:11.86:878,0,12	0/0:36,0:36:99:0,105,2896	0/0:29,0:29:81.28:0,81,2291	0/0:25,0:25:75.26:0,75,1982	0/0:20,0:20:57.17:0,57,1462
chr10	74331802	.	T	TACAC	3578.97	PASS	AB=0.780;AC=13;AF=0.232;AN=56;BaseQRankSum=8.663;DP=836;FS=5.898;HRun=0;HaplotypeScore=159.2418;InbreedingCoeff=0.4990;MQ=58.21;MQ0=12;MQRankSum=0.895;QD=13.77;ReadPosRankSum=1.278;VQSLOD=2.6621;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:52:77.45:271,0,77	0/0:12,0:12:27.09:0,27,479	0/0:38,0:15:20.12:0,20,218	0/0:51,0:17:25.80:0,26,284	0/0:36,0:36:96.27:0,96,1578	0/0:25,0:25:60.17:0,60,983	0/0:34,0:34:93.30:0,93,1550	0/1:22,0:22:52.89:53,0,57	1/1:13,17:33:23.88:728,24,0	0/0:32,0:32:38.62:0,39,289	0/1:15,0:15:2.98:3,0,128	1/1:9,16:30:36.39:706,36,0	0/1:9,10:25:29.81:419,0,30	0/0:32,0:32:81.26:0,81,1378	0/0:53,0:53:99:0,150,2524	0/0:31,0:31:90.29:0,90,1510	0/0:30,0:30:78.23:0,78,1276	0/0:10,0:11:8.94:0,9,76	0/0:31,0:30:67.76:0,68,1029	0/0:25,0:25:66.16:0,66,1021	0/0:60,0:60:99:0,138,2352	1/1:20,6:33:10.21:599,10,0	0/1:8,8:17:21.52:204,0,22	1/1:12,14:32:32.72:597,33,0	0/0:17,0:17:23.97:0,24,199	0/0:26,0:26:74.96:0,75,1215	0/0:26,0:25:60.20:0,60,1029	0/0:5,0:5:12.04:0,12,194
chr10	74331804	.	CACACAT	C	1389.88	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=6.846;DP=844;FS=5.855;HRun=0;HaplotypeScore=185.6713;InbreedingCoeff=0.5217;MQ=57.84;MQ0=14;MQRankSum=2.827;QD=5.28;ReadPosRankSum=-3.233;VQSLOD=1.7851;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:50,0:50:82.76:83,0,913	0/0:13,0:13:36.12:0,36,1028	0/0:41,0:14:17.03:0,17,219	0/0:50,0:15:12.31:0,12,307	0/0:36,0:36:99:0,102,2653	0/0:23,0:23:66.11:0,66,1550	0/0:33,0:33:93.26:0,93,2430	1/1:3,18:21:42.57:576,43,0	0/1:33,0:33:16.79:17,0,561	1/1:35,0:35:16.24:322,16,0	1/1:13,2:15:30.55:182,31,0	0/0:30,0:30:18.40:0,18,569	0/1:26,0:26:11.82:12,0,387	0/0:32,0:32:87.25:0,87,2418	0/0:54,0:54:99:0,153,4129	0/0:31,0:31:90.21:0,90,2260	0/0:29,0:29:81.20:0,81,2119	1/1:3,8:11:7.69:124,8,0	0/0:32,0:31:69.04:0,69,1073	0/0:25,0:25:66.11:0,66,1628	0/0:61,0:61:99:0,153,4165	0/1:35,0:34:99:112,0,613	0/1:19,0:19:47.09:47,0,239	0/0:32,0:32:18.95:0,19,445	1/1:17,1:18:23.73:100,24,0	0/0:29,0:28:63.02:0,63,1809	0/0:25,0:24:66.16:0,66,1769	0/0:5,0:5:14.92:0,15,325
chr10	74331806	.	CACAT	C	3089.14	PASS	AB=0.992;AC=18;AF=0.321;AN=56;BaseQRankSum=7.185;DP=851;FS=9.926;HRun=0;HaplotypeScore=151.8609;InbreedingCoeff=0.3194;MQ=57.74;MQ0=15;MQRankSum=2.107;QD=8.85;ReadPosRankSum=-4.873;VQSLOD=0.6794;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:49,0:49:99:105,0,487	0/0:14,0:14:39.13:0,39,910	0/0:43,0:15:15.32:0,15,201	0/0:52,0:15:8.51:0,9,257	0/0:36,0:36:99:0,108,2187	0/0:23,0:23:66.11:0,66,1305	0/0:36,0:36:99:0,100,2073	1/1:20,0:20:22.90:393,23,0	0/1:32,0:32:81.90:82,0,268	1/1:1,34:35:97.84:1254,98,0	1/1:8,6:14:33.03:462,33,0	0/1:29,0:29:48.70:49,0,257	0/1:25,0:25:78.98:79,0,227	0/0:34,0:34:90.20:0,90,1970	0/0:53,0:53:99:0,151,3223	0/0:32,0:32:93.17:0,93,1859	0/0:28,0:28:81.17:0,81,1726	1/1:10,1:11:7.57:121,8,0	0/0:32,0:30:73.93:0,74,918	0/0:24,0:24:68.78:0,69,1321	0/0:64,0:64:99:0,137,3566	0/1:35,0:35:99:135,0,291	0/1:19,0:19:65.60:66,0,126	0/1:30,0:30:15.46:15,0,203	1/1:1,17:18:27.04:474,27,0	0/1:29,2:30:43.99:44,0,1388	0/0:26,0:24:50.25:0,50,1384	0/0:5,0:5:14.89:0,15,255
chr10	74331808	.	CAT	C	2262.41	PASS	AB=0.967;AC=19;AF=0.339;AN=56;BaseQRankSum=9.469;DP=849;FS=4.537;HRun=0;HaplotypeScore=126.9092;InbreedingCoeff=0.2821;MQ=57.67;MQ0=16;MQRankSum=2.825;QD=5.80;ReadPosRankSum=-4.823;VQSLOD=1.6279;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:51,0:51:45.87:230,0,46	0/0:14,0:14:41.96:0,42,647	0/1:44,0:15:33.30:33,0,137	0/0:51,0:15:4.37:0,4,185	0/0:37,0:37:96.15:0,96,1550	0/0:24,0:24:69.11:0,69,1019	0/0:37,1:38:46.69:0,47,1464	1/1:19,0:19:16.43:331,16,0	0/1:30,2:32:13.50:89,0,14	1/1:34,1:35:99:761,100,0	1/1:15,0:15:35.88:280,36,0	0/1:24,2:26:11.19:90,0,11	0/1:22,2:24:45.62:62,0,46	0/0:34,0:34:64.04:0,64,1344	0/0:53,0:53:65.62:0,66,2195	0/0:31,0:31:71.65:0,72,1279	0/0:29,0:29:81.50:0,82,1264	1/1:11,0:11:7.47:59,7,0	0/0:31,0:28:29.66:0,30,624	0/0:24,0:24:46.38:0,46,944	0/0:62,0:62:99:0,140,2568	0/1:35,1:35:20.79:174,0,21	0/1:19,0:19:8.40:96,0,8	0/1:27,2:29:6.41:32,0,6	1/1:18,0:18:26.85:199,27,0	0/1:31,0:30:13.81:14,0,956	0/0:25,0:23:37.91:0,38,909	0/0:6,0:6:6.23:0,6,193
chr10	74331810	.	TAC	T	449.08	PASS	AB=0.943;AC=14;AF=0.250;AN=56;BaseQRankSum=7.977;DP=856;FS=2.175;HRun=0;HaplotypeScore=134.3535;InbreedingCoeff=0.1096;MQ=57.00;MQ0=15;MQRankSum=-0.980;QD=1.33;ReadPosRankSum=0.184;VQSLOD=2.7235;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:63.39:0,63,606	0/0:15,0:15:42.11:0,42,605	0/1:41,0:12:6.81:7,0,83	0/0:52,0:16:3.05:0,3,156	0/0:35,1:36:45.94:0,46,1138	0/0:25,0:25:48.15:0,48,732	0/1:35,3:38:9.26:9,0,1175	0/1:23,0:23:5.08:5,0,116	0/0:32,0:32:37.34:0,37,284	1/1:36,0:36:16.17:144,16,0	1/1:15,0:15:15.52:66,16,0	0/0:26,0:26:33.82:0,34,281	0/0:22,0:22:16.34:0,16,221	0/0:29,5:34:4.62:0,5,986	0/1:48,4:52:37.93:38,0,1545	0/1:30,2:32:4.50:4,0,821	0/0:29,0:29:43.50:0,44,916	0/1:12,0:12:8.61:30,0,9	0/1:24,5:26:99:136,0,338	0/0:24,0:24:15.56:0,16,661	0/0:63,0:63:99:0,137,2100	0/0:36,0:35:37.53:0,38,349	0/0:21,0:21:15:0,15,150	0/0:27,0:27:30.88:0,31,262	0/1:19,0:19:0.51:64,0,1	0/1:31,3:33:82.68:83,0,784	0/0:22,1:21:2.95:0,3,697	0/1:5,1:6:20.27:20,0,166
chr10	74333052	.	G	GAA	10745.80	PASS	AB=0.931;AC=21;AF=0.375;AN=56;BaseQRankSum=-1.750;DP=577;FS=0.668;HRun=2;HaplotypeScore=68.3843;InbreedingCoeff=0.9004;MQ=74.09;MQ0=1;MQRankSum=-0.344;QD=42.47;ReadPosRankSum=5.203;VQSLOD=4.8493;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:32:78.27:1461,78,0	0/0:7,0:7:21.07:0,21,308	0/0:12,0:12:26.02:0,26,364	0/0:9,0:9:17.99:0,18,213	0/0:23,0:23:66.21:0,66,938	0/0:22,0:22:66.19:0,66,932	0/0:14,0:14:33.09:0,33,465	0/0:30,0:30:87.27:0,87,1230	1/1:2,13:15:33.11:618,33,0	1/1:0,28:29:84.24:1441,84,0	1/1:2,25:27:72.16:1265,72,0	1/1:0,17:17:42.14:787,42,0	1/1:1,16:17:45.15:843,45,0	0/0:21,0:21:63.20:0,63,906	0/0:29,0:29:78.25:0,78,1124	0/0:20,1:21:3.97:0,4,742	0/0:15,0:15:42.13:0,42,599	0/0:12,0:12:36.12:0,36,525	0/0:23,0:23:69.20:0,69,945	0/0:33,0:33:93.31:0,93,1368	0/0:11,0:11:33.09:0,33,466	1/1:0,15:16:48.12:852,48,0	1/1:0,23:23:57.15:1031,57,0	1/1:1,21:22:48.16:899,48,0	1/1:0,27:27:81.28:1517,81,0	0/1:25,2:27:33.30:33,0,981	0/0:32,0:31:93.21:0,93,1281	0/0:10,0:10:30.07:0,30,399
chr10	74334725	.	AGTGTGTGT	A	446.98	PASS	AB=0.765;AC=7;AF=0.125;AN=56;BaseQRankSum=5.305;DP=595;FS=1.147;HRun=0;HaplotypeScore=146.3451;InbreedingCoeff=0.6644;MQ=61.59;MQ0=11;MQRankSum=-0.250;QD=6.77;ReadPosRankSum=-1.514;VQSLOD=2.4861;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:16:3.01:56,3,0	0/0:10,0:11:24.07:0,24,761	0/0:23,0:9:1.55:0,2,4	0/0:26,0:18:2.99:0,3,24	0/0:20,0:25:12.04:0,12,424	0/0:19,0:19:21.54:0,22,811	0/0:28,0:28:33.10:0,33,1101	0/0:24,0:24:16.39:0,16,259	0/0:14,0:17:20.81:0,21,724	1/1:16,10:27:26.89:432,27,0	1/1:6,4:10:3.01:75,3,0	0/0:19,0:18:20.50:0,21,736	0/0:19,0:21:30.51:0,31,937	0/0:18,0:20:39.12:0,39,1290	0/0:20,0:20:12.01:0,12,412	0/0:27,0:27:36.07:0,36,1241	0/0:33,0:33:48.16:0,48,1702	0/0:16,0:19:27.06:0,27,777	0/0:17,0:13:18.06:0,18,621	0/0:17,0:17:15.05:0,15,581	0/0:41,0:41:51.18:0,51,1777	0/0:18,0:17:15.05:0,15,524	0/0:18,0:18:18.03:0,18,626	0/0:35,0:35:66.65:0,67,2335	0/1:9,0:13:3.68:10,0,4	0/0:15,0:15:29.27:0,29,808	0/0:26,0:26:33.11:0,33,1152	0/0:8,0:8:15.05:0,15,574
chr10	74335070	.	AG	A	2112.37	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=8.397;DP=521;FS=2.049;HRun=8;HaplotypeScore=59.2139;InbreedingCoeff=0.8436;MQ=74.62;MQ0=0;MQRankSum=1.428;QD=18.53;ReadPosRankSum=2.669;VQSLOD=3.6890;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,30:34:87.14:840,87,0	0/0:8,0:8:21.02:0,21,228	0/0:34,0:29:53.55:0,54,552	0/1:23,0:19:18.19:18,0,214	0/0:18,0:18:51.14:0,51,594	0/0:21,0:21:63.17:0,63,736	0/0:27,0:27:75.23:0,75,903	0/0:25,0:25:57.16:0,57,677	0/0:15,0:15:39.12:0,39,471	1/1:1,13:14:39.06:377,39,0	1/1:2,14:16:36.06:347,36,0	0/0:21,0:21:60.18:0,60,725	0/0:30,0:30:78.24:0,78,940	0/0:14,0:14:39.12:0,39,469	0/0:26,0:26:75.22:0,75,895	0/0:11,0:11:33.10:0,33,399	0/0:18,0:18:54.16:0,54,640	0/0:12,0:12:33.10:0,33,396	0/0:17,0:17:36.11:0,36,426	0/0:15,0:15:42.13:0,42,507	0/0:23,0:23:66.19:0,66,781	0/0:9,0:9:24.07:0,24,289	0/0:9,0:9:24.05:0,24,275	0/0:13,0:13:39.12:0,39,471	1/1:1,26:27:72.11:695,72,0	0/0:16,0:16:42.13:0,42,507	0/0:23,0:23:69.21:0,69,831	0/0:2,0:2:6.02:0,6,72
chr10	74335227	.	TA	T	2145.91	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.942;DP=579;FS=0.429;HRun=9;HaplotypeScore=63.3067;InbreedingCoeff=0.9503;MQ=70.72;MQ0=3;MQRankSum=-1.581;QD=18.99;ReadPosRankSum=2.425;VQSLOD=3.9352;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.19:0,75,842	0/0:12,0:12:2.62:0,3,274	0/0:30,0:17:25.99:0,26,218	0/0:17,0:12:9.16:0,9,85	0/0:30,0:30:90.26:0,90,1028	0/0:20,0:20:51.11:0,51,574	0/0:14,0:14:39.09:0,39,437	0/0:1,0:17:45.67:0,46,240	1/1:6,13:19:39.02:357,39,0	0/0:23,0:23:60.16:0,60,677	0/0:29,0:29:75.18:0,75,829	1/1:4,14:18:30.01:275,30,0	1/1:2,17:19:48.03:439,48,0	0/0:17,0:18:41.16:0,41,503	0/0:25,0:25:69.14:0,69,761	0/0:15,0:15:45.13:0,45,519	0/0:21,0:21:51.15:0,51,588	0/0:0,0:16:37:0,37,188	0/0:23,0:23:54.12:0,54,593	0/0:23,0:23:54.16:0,54,623	0/0:6,0:6:18.05:0,18,208	1/1:4,12:16:36.02:329,36,0	1/1:0,23:23:62.70:576,63,0	1/1:2,16:18:39.02:357,39,0	0/0:35,0:35:99:0,105,1196	0/0:25,0:25:69.21:0,69,796	0/0:19,0:19:51.01:0,51,560	0/0:21,0:21:51.14:0,51,579
chr10	74335708	.	T	TTG	1349.33	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=2.759;DP=603;FS=1.411;HRun=0;HaplotypeScore=113.9978;InbreedingCoeff=0.8131;MQ=73.10;MQ0=7;MQRankSum=-0.945;QD=17.30;ReadPosRankSum=1.594;VQSLOD=3.8816;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:14.95:0,15,155	0/0:10,1:11:24.06:0,24,282	0/0:32,0:27:48.22:0,48,539	0/0:30,0:26:45.51:0,46,524	0/0:30,0:30:67.97:0,68,799	0/0:28,0:28:62.97:0,63,738	0/0:20,0:20:48.15:0,48,590	0/0:10,0:26:8.07:0,8,105	0/0:19,0:18:17.25:0,17,179	1/1:18,10:28:47.87:670,48,0	1/1:12,8:18:29.92:480,30,0	0/0:20,0:20:8.48:0,8,110	0/0:23,0:23:23.74:0,24,289	0/0:15,0:15:34.53:0,35,440	0/0:14,0:13:30.09:0,30,369	0/0:22,0:22:51.15:0,51,615	0/0:19,0:19:39.11:0,39,468	0/1:5,0:6:2.03:2,0,29	0/0:15,0:15:32.96:0,33,344	0/0:24,0:24:47.68:0,48,564	0/0:30,0:30:43.11:0,43,705	0/0:17,0:17:5.91:0,6,74	0/0:18,0:18:26.77:0,27,267	0/0:28,0:28:17.76:0,18,181	1/1:11,11:20:20.82:339,21,0	0/0:24,0:24:53.84:0,54,638	0/0:15,0:15:30.08:0,30,357	0/0:19,0:19:54.17:0,54,665
chr10	74335732	.	CTG	C	202.08	PASS	AB=0.946;AC=11;AF=0.212;AN=52;BaseQRankSum=2.295;DP=593;FS=9.448;HRun=0;HaplotypeScore=110.8446;InbreedingCoeff=-0.1001;MQ=56.13;MQ0=22;MQRankSum=3.314;QD=0.91;ReadPosRankSum=-0.034;VQSLOD=1.2755;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:20.58:0,21,113	0/1:12,0:12:6.33:6,0,184	./.	./.	0/0:29,0:28:21.07:0,21,312	0/0:30,0:30:35.98:0,36,452	0/0:17,0:18:5.25:0,5,179	0/0:25,0:19:18.04:0,18,217	0/0:16,0:16:2.74:0,3,12	0/1:26,0:24:66.74:80,0,67	1/1:19,0:16:2.32:18,2,0	0/0:19,0:18:0:0,0,0	0/0:24,0:24:15.22:0,15,126	0/0:18,0:17:12.01:0,12,159	0/0:17,0:16:21.05:0,21,294	0/1:19,3:22:42.72:43,0,225	0/1:18,2:19:44.06:44,0,347	0/0:8,0:10:9:0,9,82	0/0:12,0:12:6.02:0,6,90	0/1:16,4:19:32.73:67,0,33	0/1:34,1:34:1.03:1,0,347	0/0:18,0:18:8.48:0,8,48	0/0:13,0:13:10.56:0,11,92	0/0:36,0:36:19.60:0,20,142	0/1:23,0:22:27.18:27,0,99	0/1:22,0:24:7.20:7,0,189	0/1:19,0:19:39.05:39,0,255	0/0:15,0:14:6.01:0,6,66
chr10	74335736	.	G	GTGTGTA	1544.11	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=5.551;DP=593;FS=0.000;HRun=0;HaplotypeScore=138.9871;InbreedingCoeff=0.6148;MQ=53.43;MQ0=23;MQRankSum=1.425;QD=7.32;ReadPosRankSum=-0.049;VQSLOD=2.3102;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,20:37:9.82:90,10,0	0/0:11,0:11:27.01:0,27,376	0/0:16,0:7:8.99:0,9,78	0/0:20,0:8:17.97:0,18,158	0/0:25,0:24:54.01:0,54,739	0/0:29,0:29:80.96:0,81,970	0/0:17,0:17:23.30:0,23,490	0/0:23,0:17:35.23:0,35,280	0/0:3,15:19:2.87:0,3,24	0/1:25,0:23:64.30:225,0,64	1/1:19,0:17:23.02:165,23,0	0/0:4,16:21:4.95:0,5,22	1/1:5,18:25:13.96:249,14,0	0/0:17,0:16:35.39:0,35,415	0/0:18,0:17:39.04:0,39,581	0/0:23,0:23:63:0,63,784	0/0:20,0:19:47.25:0,47,744	0/1:12,0:10:56.79:133,0,57	0/0:13,0:13:29.93:0,30,333	0/0:19,0:18:41.60:0,42,473	0/0:36,0:34:71.70:0,72,935	1/1:1,15:17:3.01:47,3,0	1/1:3,9:15:11.32:275,11,0	1/1:36,1:37:23.54:483,24,0	0/1:22,0:22:45.29:59,0,45	0/0:25,0:25:61.89:0,62,714	0/0:19,0:19:35.92:0,36,599	0/0:10,0:9:26.92:0,27,215
chr10	74335738	.	G	GTGTA	1348.64	PASS	AB=0.925;AC=13;AF=0.232;AN=56;BaseQRankSum=6.655;DP=590;FS=0.000;HRun=0;HaplotypeScore=120.3425;InbreedingCoeff=0.4031;MQ=52.16;MQ0=25;MQRankSum=0.659;QD=6.45;ReadPosRankSum=2.024;VQSLOD=2.3487;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,2:36:12.80:227,13,0	0/0:11,0:11:27.02:0,27,341	0/0:16,0:6:11.94:0,12,96	0/0:24,0:9:20.98:0,21,199	0/0:21,0:20:54.01:0,54,666	0/0:29,0:29:80.96:0,81,887	0/0:17,0:17:44.63:0,45,515	0/0:23,0:17:42.91:0,43,314	0/0:18,0:18:3:0,3,25	0/1:26,0:24:44.58:240,0,45	0/1:20,0:18:11.35:149,0,11	0/0:24,0:23:5.08:0,5,23	1/1:24,1:25:13.96:191,14,0	0/0:17,0:16:35.93:0,36,390	0/0:17,0:16:42.03:0,42,539	0/0:24,0:24:65.98:0,66,720	0/0:20,0:19:48.02:0,48,652	0/1:12,0:10:55.20:71,0,55	0/0:13,0:13:35.93:0,36,362	0/0:19,0:18:41.55:0,42,427	0/0:36,0:34:78.29:0,78,882	1/1:15,1:16:3.01:81,3,0	1/1:12,2:14:11.89:205,12,0	0/1:15,17:37:17.64:284,0,18	0/1:21,0:21:61.61:66,0,62	0/0:23,0:23:66.08:0,66,715	0/0:19,0:19:53.85:0,54,600	0/0:10,0:9:26.92:0,27,215
chr10	74335740	.	G	GTA	839.14	PASS	AB=0.991;AC=12;AF=0.214;AN=56;BaseQRankSum=9.243;DP=583;FS=2.550;HRun=0;HaplotypeScore=103.9310;InbreedingCoeff=0.3685;MQ=51.85;MQ0=26;MQRankSum=-0.131;QD=3.96;ReadPosRankSum=-0.133;VQSLOD=2.5770;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,3:36:20.33:165,20,0	0/0:11,0:11:27.01:0,27,303	0/0:14,0:4:11.95:0,12,97	0/0:22,0:7:20.95:0,21,181	0/0:21,0:20:54.01:0,54,588	0/0:29,0:29:80.96:0,81,808	0/0:17,0:17:47.99:0,48,492	0/0:23,0:17:44.08:0,44,336	0/1:17,0:17:1.08:1,0,19	0/1:26,0:24:99:210,0,126	0/1:21,0:19:39.72:127,0,40	0/0:24,0:24:11.30:0,11,71	1/1:24,0:24:15.57:104,16,0	0/0:17,0:16:35.73:0,36,356	0/0:17,0:16:42.03:0,42,472	0/0:24,0:24:65.96:0,66,643	0/0:19,0:18:47.98:0,48,545	0/0:11,0:9:7.61:0,8,75	0/0:13,0:12:35.93:0,36,340	0/0:19,0:18:41.96:0,42,380	0/0:37,0:35:59.88:0,60,764	0/1:16,0:16:13.85:37,0,14	1/1:14,0:14:12:135,12,0	0/1:33,2:35:18.34:175,0,18	0/1:21,0:21:47.37:47,0,78	0/0:23,0:23:66.03:0,66,655	0/0:19,0:19:50.86:0,51,505	0/0:10,0:9:26.92:0,27,215
chr10	74336284	.	C	CAACA	2958.02	PASS	AB=0.753;AC=8;AF=0.143;AN=56;BaseQRankSum=-5.504;DP=581;FS=0.510;HRun=0;HaplotypeScore=91.6210;InbreedingCoeff=0.7112;MQ=65.39;MQ0=1;MQRankSum=1.143;QD=26.41;ReadPosRankSum=-0.695;VQSLOD=3.2613;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:29:29.07:29,0,108	0/0:6,0:7:17.67:0,18,230	0/1:16,0:15:7.07:7,0,241	0/0:13,0:11:19.93:0,20,272	0/0:22,0:22:57.12:0,57,877	0/0:21,0:22:65.84:0,66,1096	0/0:13,0:13:33.09:0,33,605	0/0:34,0:34:96.12:0,96,1349	0/0:26,0:26:75.15:0,75,1274	1/1:3,17:22:57.57:1168,58,0	1/1:1,22:24:59.77:1189,60,0	0/0:24,0:24:72.16:0,72,1126	0/0:21,0:21:63.17:0,63,1040	0/0:19,0:19:54.12:0,54,844	0/0:28,0:28:78.20:0,78,1269	0/0:19,0:19:54.13:0,54,883	0/0:23,0:23:66.12:0,66,1131	0/0:15,0:16:11.88:0,12,604	0/0:17,0:17:51.07:0,51,742	0/0:21,0:21:56.84:0,57,899	0/0:30,0:30:90.20:0,90,1454	0/0:10,0:10:27.06:0,27,425	0/0:13,0:13:33.09:0,33,584	0/0:29,0:29:78.19:0,78,1339	1/1:1,17:19:30.10:717,30,0	0/0:26,0:26:14.69:0,15,1096	0/0:27,0:27:75.19:0,75,1285	0/0:8,0:7:17.97:0,18,241
chr10	74336718	.	AGAACC	A	1043.52	PASS	AB=0.935;AC=14;AF=0.318;AN=44;BaseQRankSum=-0.369;DP=364;FS=34.442;HRun=0;HaplotypeScore=88.4032;InbreedingCoeff=-0.3344;MQ=34.30;MQ0=42;MQRankSum=1.501;QD=4.44;ReadPosRankSum=-1.660;VQSLOD=-0.3045;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:2:3.01:56,3,0	./.	./.	./.	0/1:32,0:31:5.23:5,0,567	0/0:14,1:15:3.24:0,3,225	0/0:16,0:14:12.59:0,13,185	0/1:30,1:31:99:133,0,589	0/1:17,1:17:38:38,0,245	./.	./.	0/1:8,3:10:81.80:101,0,82	0/0:8,0:6:8.98:0,9,91	0/0:9,0:7:15.29:0,15,146	0/0:9,0:8:10.04:0,10,196	0/1:11,0:10:8.01:8,0,113	0/1:33,1:28:99:259,0,345	0/1:14,0:8:31.94:129,0,32	0/1:15,3:19:99:110,0,204	0/1:23,3:26:99:114,0,588	0/0:5,0:4:8.73:0,9,61	0/0:5,0:5:8.84:0,9,74	0/1:7,0:7:60.42:64,0,60	0/1:7,0:5:30.55:31,0,35	./.	0/0:32,1:28:36.79:0,37,904	0/1:14,1:17:99:131,0,265	0/0:16,0:10:27.03:0,27,401
chr10	74336935	.	TGAGTCAAAATATCA	T	5958.04	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.933;DP=543;FS=4.219;HRun=0;HaplotypeScore=203.9273;InbreedingCoeff=0.9066;MQ=74.74;MQ0=0;MQRankSum=-9.396;QD=63.38;ReadPosRankSum=0.664;VQSLOD=4.5506;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,6:12:9.03:312,9,0	0/0:1,0:1:3.01:0,3,204	0/0:20,0:20:18.06:0,18,833	0/0:14,0:14:30.10:0,30,1181	0/0:21,0:21:54.19:0,54,3544	0/0:30,0:30:81.26:0,81,5003	0/0:16,0:16:36.12:0,36,2220	0/0:28,0:28:45.14:0,45,2592	0/0:22,0:22:63.22:0,63,3967	1/1:8,22:30:60.14:1972,60,0	1/1:8,22:30:57.20:2184,57,0	0/0:16,0:16:45.15:0,45,2961	0/0:20,0:20:54.19:0,54,3666	0/0:20,0:19:51.18:0,51,3188	0/0:19,0:19:54.19:0,54,3654	0/0:20,0:20:39.13:0,39,2318	0/0:19,0:19:45.15:0,45,2868	0/0:17,0:17:42.12:0,42,2630	0/0:22,0:22:39.13:0,39,2385	0/0:29,0:29:72.25:0,72,4505	0/0:11,0:11:33.11:0,33,2104	0/0:11,0:11:24.08:0,24,1608	0/0:11,0:11:24.08:0,24,1336	0/0:25,0:25:72.25:0,72,4828	1/1:4,18:22:39.13:1490,39,0	0/0:26,0:26:63.22:0,63,4024	0/0:27,0:27:66.23:0,66,4005	0/0:4,0:4:6.02:0,6,402
chr10	74339147	.	TC	T	3002.47	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.667;DP=671;FS=3.866;HRun=2;HaplotypeScore=69.9557;InbreedingCoeff=0.9969;MQ=88.39;MQ0=0;MQRankSum=-5.876;QD=34.12;ReadPosRankSum=4.121;VQSLOD=4.1406;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:87.28:1129,87,0	0/0:9,0:9:27.08:0,27,385	0/0:29,0:29:87.29:0,87,1278	0/0:23,0:23:65.88:0,66,902	0/0:34,0:34:99:0,102,1473	0/0:36,0:36:99:0,108,1596	0/0:22,0:22:66.22:0,66,989	0/0:36,0:36:99:0,102,1508	0/0:31,0:31:90.30:0,90,1349	1/1:0,24:24:69.19:866,69,0	1/1:0,17:17:51.17:661,51,0	0/0:24,0:24:72.23:0,72,1060	0/0:34,0:34:99:0,99,1459	0/0:20,0:20:60.20:0,60,899	0/0:37,0:37:99:0,111,1663	0/0:21,0:21:63.19:0,63,907	0/0:9,0:9:24.04:0,24,334	0/0:14,0:14:39.13:0,39,584	0/0:17,0:17:51.15:0,51,725	0/0:21,0:21:57.18:0,57,835	0/0:26,0:26:75.25:0,75,1124	0/0:19,0:19:57.19:0,57,854	0/0:27,0:27:78.22:0,78,1139	0/0:23,0:23:69.23:0,69,1033	1/1:1,13:14:39.13:506,39,0	0/0:30,0:30:87.29:0,87,1302	0/0:35,0:34:99:0,105,1554	0/0:6,0:6:18.06:0,18,270
chr10	74339451	.	C	CTATA	11602.12	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-10.227;DP=549;FS=11.847;HRun=0;HaplotypeScore=83.0335;InbreedingCoeff=0.9882;MQ=74.62;MQ0=0;MQRankSum=-4.750;QD=64.10;ReadPosRankSum=3.862;VQSLOD=6.7036;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:15:21.07:547,21,0	0/0:3,0:3:9.03:0,9,174	0/0:14,0:14:39.13:0,39,711	0/0:12,0:12:30.04:0,30,554	0/0:22,0:22:63.22:0,63,1221	0/0:22,0:22:66.23:0,66,1268	0/0:16,0:16:42.14:0,42,808	0/0:38,0:38:99:0,105,2000	1/1:0,16:16:39.13:1067,39,0	1/1:6,21:28:81.26:2097,81,0	1/1:0,7:8:18.06:492,18,0	1/1:3,20:25:54.19:1463,54,0	1/1:2,24:26:66.23:1779,66,0	0/0:26,0:26:78.27:0,78,1512	0/0:22,0:22:54.16:0,54,980	0/0:21,0:21:51.16:0,51,955	0/0:26,0:26:75.24:0,75,1388	0/0:16,0:16:42.14:0,42,814	0/0:21,0:21:62.87:0,63,1130	0/0:20,0:20:60.21:0,60,1148	0/0:13,0:13:36.12:0,36,689	1/1:0,14:14:36.12:984,36,0	1/1:2,16:19:47.81:1284,48,0	1/1:4,7:11:18.06:493,18,0	1/1:1,18:19:51.18:1393,51,0	0/0:24,0:24:66.21:0,66,1209	0/0:38,0:38:99:0,114,2189	0/0:14,0:14:42.14:0,42,812
chr10	74340363	.	G	GGTGTGTGTGT	2377.91	PASS	AB=0.858;AC=22;AF=0.440;AN=50;BaseQRankSum=0.632;DP=606;FS=0.000;HRun=0;HaplotypeScore=178.3010;InbreedingCoeff=0.6429;MQ=67.98;MQ0=10;MQRankSum=-5.245;QD=9.44;ReadPosRankSum=-2.400;VQSLOD=1.7251;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:29:16.49:432,16,0	0/0:8,0:9:18.06:0,18,421	./.	./.	0/0:28,0:29:42.10:0,42,1020	0/0:20,0:19:24.08:0,24,605	0/1:14,0:15:26.14:26,0,79	1/1:22,0:22:12.46:197,12,0	1/1:10,3:13:3.01:148,3,0	1/1:23,0:31:30.05:753,30,0	1/1:8,0:9:3.01:96,3,0	1/1:11,0:19:3.01:90,3,0	1/1:17,0:20:6:159,6,0	0/0:11,0:12:6.02:0,6,159	0/0:18,0:18:23.28:0,23,556	0/0:21,0:21:10.53:0,11,551	0/0:26,0:26:39.12:0,39,983	0/1:10,0:14:53.55:124,0,54	0/0:19,0:21:14.25:0,14,254	0/0:13,0:14:27.07:0,27,617	0/0:44,0:45:41.15:0,41,844	1/1:14,0:27:8.33:269,8,0	1/1:8,0:13:2.99:24,3,0	./.	1/1:12,3:28:6.02:239,6,0	0/0:25,0:25:25.29:0,25,526	0/0:18,0:21:33.10:0,33,857	0/0:9,0:11:15.05:0,15,351
chr10	74340779	.	AACACACACACACACACACACACACACAC	A	1904.97	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.374;DP=498;FS=18.978;HRun=0;HaplotypeScore=300.8331;InbreedingCoeff=0.8220;MQ=71.86;MQ0=13;MQRankSum=-2.090;QD=26.83;ReadPosRankSum=-1.530;VQSLOD=0.7728;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,2:29:12.01:467,12,0	0/0:6,0:6:3.01:0,3,326	0/0:28,0:20:8.89:0,9,248	0/0:41,0:29:19.31:0,19,638	0/0:20,0:19:39.13:0,39,3866	0/0:16,0:15:27.08:0,27,2771	0/0:23,0:22:19.71:0,20,1660	0/0:17,0:17:15.05:0,15,736	0/0:19,0:26:28.04:0,28,2158	1/1:16,5:21:8.99:265,9,0	1/1:8,4:12:8.99:452,9,0	0/0:9,0:10:18.03:0,18,1094	0/0:12,0:11:10.25:0,10,443	0/0:15,0:15:15.05:0,15,1630	0/0:19,0:20:24.08:0,24,2493	0/0:18,0:18:24.08:0,24,1921	0/0:29,0:28:44.75:0,45,4159	0/0:12,0:12:17.44:0,17,500	0/0:14,0:14:18.05:0,18,1700	0/0:17,0:16:33.11:0,33,2687	0/0:30,0:29:39.13:0,39,3853	0/0:9,0:10:15.04:0,15,1215	0/0:11,0:10:18.05:0,18,1133	0/0:20,0:19:30.10:0,30,2424	1/1:4,5:7:12.04:864,12,0	0/0:16,0:16:30.09:0,30,2737	0/0:9,0:9:6.86:0,7,208	0/0:5,0:4:12.04:0,12,1294
chr10	74341181	.	CT	C	3934.05	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.171;DP=741;FS=2.810;HRun=2;HaplotypeScore=80.0378;InbreedingCoeff=0.9981;MQ=73.67;MQ0=0;MQRankSum=-1.901;QD=37.11;ReadPosRankSum=2.566;VQSLOD=4.4194;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,48:48:99:1714,132,0	0/0:13,0:13:36.12:0,36,539	0/0:19,0:18:48.60:0,49,665	0/0:18,0:18:18.94:0,19,382	0/0:26,0:26:78.26:0,78,1169	0/0:22,0:22:66.20:0,66,966	0/0:32,0:32:96.33:0,96,1436	0/0:31,0:31:90.30:0,90,1331	0/0:19,0:19:57.18:0,57,832	1/1:0,21:21:60.19:779,60,0	1/1:0,19:19:57.19:740,57,0	0/0:25,0:25:75.25:0,75,1100	0/0:30,0:30:90.29:0,90,1328	0/0:27,0:27:81.27:0,81,1213	0/0:41,0:41:99:0,120,1777	0/0:24,0:24:72.23:0,72,1059	0/0:18,0:18:54.18:0,54,807	0/0:24,0:24:72.24:0,72,1079	0/0:22,0:22:63.18:0,63,898	0/0:36,0:36:99:0,105,1574	0/0:45,0:45:99:0,132,1974	0/0:29,0:29:87.28:0,87,1285	0/0:21,0:21:57.19:0,57,853	0/0:22,0:22:66.17:0,66,942	1/1:0,18:18:54.18:701,54,0	0/0:37,0:37:99:0,111,1623	0/0:38,0:38:99:0,111,1661	0/0:16,0:16:48.16:0,48,719
chr10	74342233	.	G	GGGCTGT	983.61	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.303;DP=660;FS=15.188;HRun=0;HaplotypeScore=150.0900;InbreedingCoeff=0.9197;MQ=84.95;MQ0=0;MQRankSum=-5.638;QD=29.81;ReadPosRankSum=-3.477;VQSLOD=1.8190;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:71.21:0,71,1315	0/0:16,0:16:21.07:0,21,454	0/0:25,0:25:44.52:0,45,908	0/0:18,0:18:27.05:0,27,497	0/0:28,0:28:45.07:0,45,849	0/0:25,0:25:47.87:0,48,904	0/0:24,0:24:48:0,48,860	1/1:24,2:26:25.24:811,25,0	0/0:16,0:16:27.07:0,27,505	0/0:32,0:32:66.18:0,66,1241	0/0:27,0:27:48.11:0,48,951	0/0:25,0:25:50.63:0,51,796	0/0:19,0:19:30.05:0,30,573	0/0:27,0:27:47.88:0,48,763	0/0:20,0:20:36.11:0,36,720	0/0:12,0:12:27.05:0,27,539	0/0:48,0:48:99:0,114,2280	1/1:4,3:7:9.03:286,9,0	0/0:28,0:28:42.04:0,42,700	0/0:31,0:31:39.13:0,39,842	0/0:32,0:32:51.16:0,51,1003	0/0:22,0:22:26.71:0,27,517	0/0:14,0:14:12.03:0,12,222	0/0:21,0:21:51.17:0,51,1053	0/0:20,0:20:27.09:0,27,564	0/0:30,0:30:48.16:0,48,955	0/0:21,0:21:42.14:0,42,908	0/0:8,0:8:9.03:0,9,161
chr10	74342515	.	G	GCTCGCTCTCT	1088.49	PASS	AB=0.992;AC=17;AF=0.315;AN=54;BaseQRankSum=5.764;DP=638;FS=0.000;HRun=0;HaplotypeScore=176.0387;InbreedingCoeff=0.4293;MQ=64.13;MQ0=16;MQRankSum=-3.666;QD=5.42;ReadPosRankSum=-1.749;VQSLOD=2.2933;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,19:29:2.87:15,3,0	0/0:9,0:9:21.07:0,21,519	0/0:46,0:15:40.02:0,40,618	0/0:61,0:21:16.98:0,17,531	0/0:28,0:28:65.80:0,66,1288	0/0:25,0:25:56.27:0,56,1257	0/0:20,0:20:48.55:0,49,1146	0/1:17,0:21:40.54:41,0,180	1/1:15,0:15:21.56:297,22,0	0/1:20,0:19:76.24:76,0,248	0/1:22,0:23:25.54:26,0,130	1/1:1,0:20:3.01:56,3,0	1/1:16,0:15:29.07:346,29,0	0/0:24,0:24:27.36:0,27,1048	0/0:17,0:17:45.01:0,45,1067	0/0:18,0:18:32.65:0,33,839	0/0:18,0:18:51.16:0,51,1155	0/1:9,0:9:19.95:274,0,20	0/0:22,0:20:38.95:0,39,658	0/0:25,0:25:60.12:0,60,1281	0/0:35,0:35:77.51:0,78,1696	./.	1/1:5,0:16:0.34:1,0,0	1/1:9,0:8:5.97:46,6,0	0/1:17,0:17:79.06:79,0,177	0/0:19,0:19:50.30:0,50,1157	0/0:30,0:30:81.07:0,81,2133	0/0:17,0:17:44.77:0,45,869
chr10	74342551	.	T	TCACACACA	254.97	PASS	AB=0.906;AC=8;AF=0.143;AN=56;BaseQRankSum=2.875;DP=539;FS=0.000;HRun=0;HaplotypeScore=141.4525;InbreedingCoeff=0.5333;MQ=51.75;MQ0=15;MQRankSum=-0.777;QD=2.86;ReadPosRankSum=-2.709;VQSLOD=1.9383;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:13:0:0,0,0	0/0:8,0:8:21.96:0,22,575	0/0:12,0:3:6.02:0,6,79	0/0:16,0:3:0.47:0,0,1	0/0:29,0:29:47.96:0,48,1452	0/0:26,0:26:51.03:0,51,1275	0/0:18,0:18:38.55:0,39,952	0/0:29,0:27:74.48:0,74,1195	0/0:8,0:15:12.02:0,12,157	0/0:22,0:20:53.61:0,54,1031	0/0:17,0:16:14.86:0,15,329	0/1:15,0:14:0.81:140,0,1	0/1:6,8:14:33.04:83,0,33	0/0:19,0:19:35.36:0,35,775	0/0:25,0:24:66.21:0,66,1704	0/0:29,0:29:54.02:0,54,1469	0/0:14,0:14:42.14:0,42,1044	0/0:9,0:9:27.09:0,27,564	0/0:21,0:20:58.26:0,58,1214	0/0:30,0:29:60.83:0,61,1657	0/0:35,0:34:60.52:0,61,1586	0/1:19,0:16:0:0,0,0	1/1:13,0:13:3.01:72,3,0	1/1:12,0:10:2.73:71,3,0	0/0:17,0:17:19.22:0,19,493	0/0:22,0:22:60.64:0,61,1269	0/0:28,0:28:71.87:0,72,1681	0/0:8,0:6:18.06:0,18,514
chr10	74342613	.	GTA	G	1160.15	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.597;DP=605;FS=2.368;HRun=0;HaplotypeScore=84.8962;InbreedingCoeff=0.9799;MQ=78.14;MQ0=0;MQRankSum=-0.980;QD=31.36;ReadPosRankSum=1.981;VQSLOD=5.8330;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,35:37:93.13:1255,93,0	0/0:5,0:5:15.05:0,15,261	0/0:21,0:21:48.13:0,48,724	0/0:12,0:11:21.07:0,21,369	0/0:21,0:21:57.15:0,57,954	0/0:22,0:22:60.21:0,60,1059	0/0:18,0:18:50.84:0,51,824	0/0:28,0:28:81.25:0,81,1345	0/0:26,0:26:66.23:0,66,1167	0/0:24,0:24:66.22:0,66,1130	0/0:15,0:15:39.13:0,39,687	0/0:15,0:15:42.14:0,42,713	0/0:22,0:22:39.13:0,39,679	0/0:27,0:27:78.25:0,78,1350	0/0:21,0:21:60.21:0,60,1064	0/0:26,0:26:78.27:0,78,1375	0/0:23,0:23:66.23:0,66,1162	0/0:18,0:18:48.16:0,48,841	0/0:22,0:22:63.18:0,63,1052	0/0:36,0:36:99:0,99,1615	0/0:16,0:16:45.11:0,45,737	0/0:15,0:15:45.15:0,45,781	0/0:16,0:16:45.15:0,45,798	0/0:14,0:14:30.10:0,30,513	0/0:20,0:20:60.21:0,60,1058	0/0:35,0:35:99:0,105,1782	0/0:30,0:30:81.28:0,81,1435	0/0:20,0:20:60.21:0,60,1046
chr10	74343877	.	T	TA	2427.24	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-4.241;DP=455;FS=1.508;HRun=1;HaplotypeScore=55.4401;InbreedingCoeff=0.9260;MQ=74.11;MQ0=2;MQRankSum=0.292;QD=23.12;ReadPosRankSum=3.494;VQSLOD=3.8231;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:32.98:0,33,366	0/0:8,0:8:21.05:0,21,253	0/0:19,0:15:20.82:0,21,171	0/1:10,0:9:2.20:2,0,31	0/0:24,0:24:60.55:0,61,674	0/0:25,0:25:69.09:0,69,756	0/0:12,0:12:27.75:0,28,354	0/0:14,0:14:33.74:0,34,236	1/1:0,18:18:36.12:459,36,0	0/0:29,0:29:80.99:0,81,853	0/0:27,0:27:74.96:0,75,803	1/1:2,12:14:41.15:491,41,0	1/1:2,15:17:29.08:333,29,0	0/0:6,0:6:18.02:0,18,189	0/0:10,0:10:30.08:0,30,370	0/0:17,0:17:23.34:0,23,488	0/0:15,0:15:42.05:0,42,452	0/0:16,0:16:19.88:0,20,112	0/0:21,0:21:60.10:0,60,662	0/0:25,0:25:72.01:0,72,749	0/0:5,0:5:15.03:0,15,168	1/1:0,7:8:23.97:259,24,0	1/1:1,25:26:59.97:726,60,0	1/1:1,11:12:27.09:344,27,0	0/0:19,0:19:53.98:0,54,567	0/0:22,0:22:60.01:0,60,655	0/0:17,0:18:50.68:0,51,482	0/0:6,0:6:17.99:0,18,209
chr10	74344714	.	G	GGA	1338.78	PASS	AB=0.929;AC=12;AF=0.214;AN=56;BaseQRankSum=6.138;DP=482;FS=11.286;HRun=0;HaplotypeScore=73.8258;InbreedingCoeff=0.7420;MQ=58.35;MQ0=13;MQRankSum=-7.125;QD=9.70;ReadPosRankSum=-5.152;VQSLOD=0.6753;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:72.16:0,72,948	0/0:8,0:8:24.07:0,24,327	0/0:18,0:15:16.83:0,17,424	0/0:20,0:8:11.96:0,12,172	0/0:22,0:22:51.17:0,51,716	0/0:19,0:18:38.95:0,39,596	0/0:15,0:13:24.03:0,24,327	0/0:27,0:26:9.42:0,9,571	1/1:6,26:29:26.57:414,27,0	0/0:21,0:19:17.20:0,17,592	0/0:12,0:12:27.09:0,27,386	1/1:12,5:16:25.83:318,26,0	1/1:2,20:23:16.61:274,17,0	0/0:10,0:10:30.09:0,30,413	0/0:5,0:5:4.74:0,5,84	0/0:8,0:8:24.08:0,24,344	0/0:17,0:16:42.14:0,42,599	0/1:12,0:7:8.72:9,0,95	0/0:12,0:12:30.06:0,30,412	0/0:12,0:12:33.10:0,33,450	0/0:18,0:17:36.09:0,36,493	1/1:4,21:27:12.04:205,12,0	1/1:3,12:13:15.01:232,15,0	0/1:10,2:11:33.81:63,0,34	0/0:25,0:24:58.59:0,59,823	0/0:17,0:17:48.14:0,48,653	0/0:14,0:14:39.13:0,39,557	0/0:13,0:13:33.11:0,33,472
chr10	74348408	.	G	GA	1550.73	PASS	AB=0.758;AC=12;AF=0.214;AN=56;BaseQRankSum=-5.508;DP=413;FS=18.884;HRun=10;HaplotypeScore=43.5845;InbreedingCoeff=0.7287;MQ=72.25;MQ0=0;MQRankSum=-0.029;QD=17.04;ReadPosRankSum=0.314;VQSLOD=2.3086;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,1:18:15.96:0,16,337	0/0:3,0:3:8.99:0,9,74	0/0:11,0:11:0.61:0,1,66	0/0:4,0:4:5.99:0,6,49	0/0:30,2:32:13.89:0,14,521	0/1:10,1:11:11.05:11,0,127	0/0:10,0:10:29.96:0,30,246	0/0:29,0:30:67.94:0,68,545	1/1:2,9:11:21.05:224,21,0	0/0:18,0:18:41.91:0,42,343	0/0:7,0:7:20.97:0,21,172	0/1:4,8:12:0.58:200,0,1	1/1:3,13:16:39.09:409,39,0	0/0:14,0:15:34.97:0,35,277	0/0:9,0:9:26.97:0,27,222	0/0:13,1:14:0.95:0,1,211	0/0:20,0:20:42.71:0,43,383	0/0:11,0:12:22.98:0,23,178	0/0:17,0:17:44.94:0,45,367	0/0:22,1:24:26.97:0,27,417	0/0:14,0:14:29.95:0,30,245	1/1:5,8:14:26.90:268,27,0	1/1:4,16:19:20.48:423,20,0	1/1:0,7:7:18.05:192,18,0	0/0:13,0:13:32.96:0,33,271	0/0:15,0:15:32.96:0,33,271	0/0:21,0:21:50.33:0,50,392	0/0:15,0:15:38.94:0,39,320
chr10	74348869	.	C	CG	58.35	PASS	AB=0.845;AC=5;AF=0.089;AN=56;BaseQRankSum=3.695;DP=295;FS=1.712;HRun=0;HaplotypeScore=35.0069;InbreedingCoeff=-0.1074;MQ=56.17;MQ0=6;MQRankSum=-3.769;QD=1.58;ReadPosRankSum=-0.968;VQSLOD=1.5337;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.11:0,57,737	0/1:4,2:6:65.56:66,0,111	0/1:13,0:6:12.25:12,0,93	0/0:8,0:3:6.02:0,6,84	0/0:8,0:8:21.03:0,21,270	0/0:11,0:10:24.02:0,24,294	0/0:10,0:10:30.09:0,30,404	0/0:17,0:16:39.39:0,39,531	0/0:9,0:9:27.09:0,27,377	0/1:4,1:5:34.84:35,0,114	0/1:4,1:5:31.82:32,0,149	0/0:13,0:12:36.12:0,36,501	0/0:9,0:9:24.08:0,24,335	0/0:12,0:12:30.10:0,30,419	0/0:14,0:14:38.16:0,38,509	0/0:8,0:8:21.07:0,21,292	0/0:9,0:9:27.09:0,27,373	0/0:32,0:32:95.50:0,96,1279	0/0:11,0:10:24.07:0,24,321	0/1:6,1:7:29.69:30,0,191	0/0:24,0:24:66.20:0,66,903	0/0:4,0:4:12.03:0,12,153	0/0:5,0:5:12.02:0,12,150	0/0:8,0:8:24.08:0,24,334	0/0:9,0:9:21.07:0,21,283	0/0:7,0:7:21.07:0,21,287	0/0:7,0:7:21.06:0,21,277	0/0:3,0:3:9.03:0,9,126
chr10	74349056	.	TGGG	T	4072.04	PASS	AB=0.932;AC=20;AF=0.357;AN=56;BaseQRankSum=6.771;DP=422;FS=31.223;HRun=12;HaplotypeScore=72.9710;InbreedingCoeff=0.6373;MQ=51.58;MQ0=7;MQRankSum=-0.142;QD=20.46;ReadPosRankSum=7.766;VQSLOD=-0.3522;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:18:9.37:9,0,16	0/0:4,0:4:6:0,6,82	0/0:14,0:3:3:0,3,25	0/0:6,0:6:3.01:0,3,48	0/0:11,0:11:3.01:0,3,59	0/0:16,0:16:18.02:0,18,247	0/0:17,0:18:20.28:0,20,294	1/1:10,17:20:29.49:363,29,0	1/1:5,12:17:26.71:340,27,0	0/1:15,0:15:11.85:12,0,32	1/1:6,0:6:0.47:1,0,0	1/1:3,19:22:63.07:776,63,0	1/1:1,22:23:60.17:758,60,0	0/0:13,0:13:6.89:0,7,72	0/0:14,0:14:15.02:0,15,186	0/0:15,0:14:15.05:0,15,268	0/0:12,0:12:12.04:0,12,204	1/1:6,19:23:51.15:641,51,0	0/0:9,0:8:2.98:0,3,22	0/0:19,0:19:15.03:0,15,224	0/0:25,0:25:11.17:0,11,147	1/1:0,15:15:42.11:530,42,0	1/1:3,7:10:18.05:227,18,0	1/1:6,14:20:33.09:417,33,0	0/0:7,0:9:2.45:0,2,5	0/0:11,0:11:6.02:0,6,85	0/0:10,0:10:15.05:0,15,252	0/0:14,0:13:6:0,6,83
chr10	74351497	.	C	CA	7255.83	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=4.401;DP=683;FS=4.854;HRun=3;HaplotypeScore=75.4076;InbreedingCoeff=0.9996;MQ=91.94;MQ0=0;MQRankSum=-1.653;QD=37.79;ReadPosRankSum=-1.226;VQSLOD=4.7426;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1187	0/0:9,0:9:24.07:0,24,287	0/0:33,0:33:89.46:0,89,1033	0/0:22,1:22:54.11:0,54,613	0/0:35,0:35:99:0,99,1176	0/0:22,0:22:63.19:0,63,756	0/0:16,0:16:42.13:0,42,504	1/1:1,33:34:96.30:1311,96,0	1/1:0,19:19:57.19:798,57,0	0/0:26,0:26:75.22:0,75,891	0/0:19,0:19:51.16:0,51,610	1/1:0,22:22:60.20:840,60,0	1/1:1,27:28:69.23:966,69,0	0/0:22,0:22:57.17:0,57,684	0/0:29,0:29:81.25:0,81,972	0/0:27,0:27:75.23:0,75,900	0/0:26,0:26:78.24:0,78,936	1/1:1,11:12:33.11:462,33,0	0/0:24,0:24:66.20:0,66,792	0/0:33,0:33:93.28:0,93,1113	0/0:19,0:19:57.13:0,57,667	1/1:2,26:28:75.25:1049,75,0	1/1:2,34:36:96.29:1324,96,0	1/1:0,13:13:36.12:504,36,0	0/0:21,0:21:57.17:0,57,684	0/0:35,0:35:99:0,99,1168	0/0:26,0:26:78.23:0,78,925	0/0:12,0:12:36.11:0,36,432
chr10	74351950	.	TG	T	4601.72	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.987;DP=521;FS=6.827;HRun=2;HaplotypeScore=50.7881;InbreedingCoeff=0.9806;MQ=68.78;MQ0=0;MQRankSum=0.561;QD=34.09;ReadPosRankSum=-0.566;VQSLOD=4.4319;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.30:0,90,1346	0/0:10,0:10:27.09:0,27,405	0/0:2,0:2:6.02:0,6,90	0/0:10,0:10:23.57:0,24,280	0/0:27,0:27:78.25:0,78,1146	0/0:25,0:25:75.25:0,75,1122	0/0:11,0:11:33.11:0,33,494	1/1:1,35:36:99:1344,105,0	1/1:1,12:13:33.11:429,33,0	0/0:22,0:22:66.21:0,66,961	0/0:24,0:24:69.23:0,69,1033	1/1:0,10:10:24.08:312,24,0	1/1:2,14:16:36.11:461,36,0	0/0:12,0:12:33.11:0,33,493	0/0:19,0:19:57.18:0,57,833	0/0:22,0:22:66.22:0,66,970	0/0:26,0:26:78.26:0,78,1163	1/1:1,18:19:45.15:584,45,0	0/0:15,0:15:42.14:0,42,629	0/0:26,0:26:78.26:0,78,1168	0/0:17,0:17:51.17:0,51,761	1/1:1,7:8:24.08:304,24,0	1/1:0,25:25:69.22:896,69,0	1/1:1,7:8:21.07:273,21,0	0/0:21,0:21:63.20:0,63,924	0/0:20,0:20:60.20:0,60,900	0/0:24,0:23:69.23:0,69,1034	0/0:22,0:22:66.22:0,66,985
chr10	74352833	.	TACA	T	6453.63	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.726;DP=716;FS=12.552;HRun=0;HaplotypeScore=100.7481;InbreedingCoeff=0.9989;MQ=79.59;MQ0=0;MQRankSum=-1.347;QD=35.27;ReadPosRankSum=0.959;VQSLOD=5.0613;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.18:0,78,1573	0/0:8,0:8:24.06:0,24,437	0/0:27,0:27:72.22:0,72,1362	0/0:23,0:23:57.02:0,57,1004	0/0:32,0:32:90.31:0,90,1873	0/0:22,0:22:54.16:0,54,1038	0/0:26,0:26:60.21:0,60,1250	1/1:3,26:29:78.23:1142,78,0	1/1:2,23:25:48.16:735,48,0	0/0:44,0:44:99:0,114,2343	0/0:22,0:22:44.19:0,44,1051	1/1:0,32:32:84.29:1287,84,0	1/1:2,28:30:75.25:1149,75,0	0/0:32,0:32:93.29:0,93,1867	0/0:28,0:28:78.24:0,78,1566	0/0:28,1:29:38.30:0,38,1611	0/0:15,0:15:42.14:0,42,891	1/1:1,11:12:24.08:368,24,0	0/0:18,0:18:45.15:0,45,921	0/0:26,0:26:66.20:0,66,1322	0/0:22,0:22:63.21:0,63,1277	1/1:1,19:20:39.13:578,39,0	1/1:3,23:26:53.38:826,53,0	1/1:0,9:9:24.08:368,24,0	0/0:29,0:29:78.27:0,78,1664	0/0:30,0:30:78.27:0,78,1645	0/0:42,0:42:99:0,120,2485	0/0:32,0:32:86.95:0,87,1855
chr10	74353420	.	C	CA	3921.22	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-10.413;DP=546;FS=3.462;HRun=8;HaplotypeScore=51.4817;InbreedingCoeff=0.9861;MQ=75.07;MQ0=0;MQRankSum=-1.661;QD=25.46;ReadPosRankSum=-1.663;VQSLOD=3.8157;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.04:0,78,714	0/0:8,0:8:24.01:0,24,220	0/0:8,0:8:21:0,21,189	0/0:14,0:13:20.99:0,21,184	0/0:28,0:28:69.02:0,69,632	0/0:21,0:21:57.02:0,57,522	0/0:13,0:13:33.01:0,33,302	1/1:10,20:30:60.12:659,60,0	1/1:3,19:22:54.16:619,54,0	0/0:29,0:29:72.03:0,72,659	0/0:26,0:27:74.06:0,74,665	1/1:3,14:17:39.12:450,39,0	1/1:2,16:18:42.12:484,42,0	0/0:18,0:18:51:0,51,461	0/0:19,0:19:54.03:0,54,494	0/0:17,0:17:15.83:0,16,331	0/0:18,0:18:45.02:0,45,412	1/1:2,11:13:33.06:360,33,0	0/0:16,0:16:39.02:0,39,356	0/0:34,0:34:93.05:0,93,851	0/0:3,0:3:9:0,9,82	1/1:5,16:21:39.12:450,39,0	1/1:3,18:21:47.82:554,48,0	1/1:2,10:12:30.09:346,30,0	0/0:22,0:22:60.02:0,60,549	0/0:22,0:22:57.02:0,57,522	0/0:31,0:31:81.03:0,81,741	0/0:15,0:15:32.99:0,33,297
chr10	74354252	.	T	TA	532.33	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.843;DP=459;FS=0.000;HRun=1;HaplotypeScore=45.2940;InbreedingCoeff=0.9547;MQ=78.34;MQ0=1;MQRankSum=-1.093;QD=28.02;ReadPosRankSum=0.436;VQSLOD=3.2439;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:42.14:627,42,0	0/0:4,0:4:12.04:0,12,156	0/0:19,0:19:19.87:0,20,440	0/0:11,0:10:22.14:0,22,218	0/0:20,0:20:54.17:0,54,699	0/0:21,0:21:60.13:0,60,742	0/0:11,0:11:33.11:0,33,428	0/0:29,0:29:81.26:0,81,1039	0/0:12,0:12:33.11:0,33,427	0/0:25,0:25:69.21:0,69,872	0/0:16,0:16:42.12:0,42,524	0/0:15,0:15:45.15:0,45,578	0/0:13,0:13:33.09:0,33,412	0/0:9,0:9:27.09:0,27,350	0/0:14,0:14:39.13:0,39,506	0/0:15,0:15:45.13:0,45,570	0/0:13,0:13:36.09:0,36,450	0/0:14,0:13:39.13:0,39,501	0/0:14,0:14:39.12:0,39,492	0/0:23,0:23:69.22:0,69,889	0/0:10,0:10:24.08:0,24,311	0/0:18,0:18:54.18:0,54,701	0/0:24,0:24:69.22:0,69,892	0/0:14,0:14:39.09:0,39,476	0/0:21,0:21:60.19:0,60,779	0/0:19,0:19:57.17:0,57,715	0/0:29,0:29:81.25:0,81,1036	0/0:7,0:7:21.07:0,21,268
chr10	74356220	.	GCACACACACACACACACACA	G	968.21	PASS	AB=0.977;AC=22;AF=0.458;AN=48;BaseQRankSum=2.499;DP=540;FS=2.995;HRun=0;HaplotypeScore=242.5342;InbreedingCoeff=-0.1501;MQ=51.29;MQ0=29;MQRankSum=-0.704;QD=2.86;ReadPosRankSum=1.099;VQSLOD=2.6138;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:2.99:0,3,23	1/1:3,0:3:2.96:19,3,0	./.	./.	./.	0/1:19,0:16:3.58:4,0,28	0/1:25,0:24:8.18:69,0,8	0/0:30,0:29:18.25:0,18,118	0/1:18,0:16:4.01:42,0,4	0/1:15,0:12:5.24:5,0,37	./.	1/1:15,0:14:2.92:18,3,0	0/1:24,0:22:26.13:113,0,26	0/1:17,1:18:33.55:105,0,34	1/1:16,8:24:4.81:215,5,0	1/1:13,8:18:6.91:281,7,0	0/1:22,0:22:15.55:16,0,70	0/0:17,0:16:22.25:0,22,472	0/0:12,0:12:0.89:0,1,2	0/1:12,0:12:13.09:13,0,30	0/1:49,0:45:20.46:53,0,20	0/0:11,0:10:2.68:0,3,23	0/0:11,0:9:5.99:0,6,48	0/1:29,0:29:9.40:28,0,9	0/1:15,6:20:13.98:100,0,14	0/0:18,0:15:1.45:0,1,148	1/1:13,0:12:2.92:17,3,0	0/1:10,0:9:8.03:8,0,34
chr10	74357449	.	GC	G	5796.32	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.193;DP=655;FS=1.483;HRun=3;HaplotypeScore=73.6162;InbreedingCoeff=0.9985;MQ=80.90;MQ0=0;MQRankSum=-4.232;QD=33.12;ReadPosRankSum=2.072;VQSLOD=5.3493;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,1984	0/0:11,0:11:33.11:0,33,473	0/0:14,0:14:42.14:0,42,602	0/0:29,0:29:69.22:0,69,932	0/0:24,0:24:63.09:0,63,820	0/0:17,0:17:48.16:0,48,690	0/0:35,0:35:99:0,105,1508	1/1:1,30:31:90.28:1116,90,0	1/1:1,17:18:45.14:557,45,0	0/0:28,0:28:81.26:0,81,1136	0/0:19,0:19:54.14:0,54,753	1/1:1,22:23:57.18:706,57,0	1/1:1,30:31:87.27:1076,87,0	0/0:35,0:35:99:0,102,1447	0/0:23,0:23:66.21:0,66,933	0/0:22,0:22:66.22:0,66,947	0/0:31,0:31:90.29:0,90,1278	1/1:2,12:14:33.10:409,33,0	0/0:17,0:17:48.16:0,48,686	0/0:20,0:20:51.16:0,51,715	0/0:25,0:25:75.19:0,75,1031	1/1:0,16:16:45.14:558,45,0	1/1:0,19:19:48.15:594,48,0	1/1:0,23:23:63.20:780,63,0	0/0:35,0:35:99:0,99,1424	0/0:28,0:28:84.27:0,84,1191	0/0:13,0:13:39.13:0,39,561	0/0:6,0:6:18.06:0,18,259
chr10	74357534	.	AT	A	1213.69	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.647;DP=630;FS=166.021;HRun=1;HaplotypeScore=67.8115;InbreedingCoeff=0.9915;MQ=59.28;MQ0=29;MQRankSum=-11.679;QD=17.59;ReadPosRankSum=-1.686;VQSLOD=-0.6793;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:43:99:0,114,1816	0/0:14,0:14:42.14:0,42,671	0/0:41,0:20:57.11:0,57,874	0/0:40,0:14:40.34:0,40,577	0/0:31,0:31:90.31:0,90,1433	0/0:20,0:20:60.20:0,60,935	0/0:31,0:29:84.29:0,84,1338	1/1:0,9:9:24.08:308,24,0	1/1:0,9:8:23.78:176,24,0	0/0:25,0:25:69.20:0,69,1076	0/0:20,0:19:57.18:0,57,887	1/1:2,13:14:38.58:259,39,0	1/1:1,8:9:23.80:180,24,0	0/0:41,0:41:99:0,114,1798	0/0:32,0:31:87.30:0,87,1389	0/0:33,0:33:99:0,99,1579	0/0:25,0:24:63.21:0,63,1001	1/1:1,5:5:14.91:122,15,0	0/0:29,0:28:81.28:0,81,1274	0/0:26,0:24:60.20:0,60,957	0/0:19,0:16:45.15:0,45,719	1/1:0,8:8:23.74:159,24,0	1/1:0,5:5:14.82:98,15,0	1/1:1,7:8:17.79:118,18,0	0/0:24,0:24:66.18:0,66,1004	0/0:31,0:31:93.32:0,93,1483	0/0:20,0:20:60.20:0,60,957	0/0:13,0:12:33.11:0,33,527
chr10	74360269	.	CA	C	1836.33	PASS	AB=0.550;AC=15;AF=0.268;AN=56;BaseQRankSum=4.160;DP=449;FS=30.306;HRun=5;HaplotypeScore=47.9218;InbreedingCoeff=0.8644;MQ=61.84;MQ0=12;MQRankSum=-1.031;QD=19.96;ReadPosRankSum=-0.741;VQSLOD=1.5379;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:36.12:0,36,486	0/0:6,0:6:15.05:0,15,205	0/0:46,1:25:58.98:0,59,740	0/0:54,0:21:39.03:0,39,534	0/0:20,0:20:43.44:0,43,645	0/0:7,0:7:18.05:0,18,232	0/0:18,0:16:43.46:0,43,460	1/1:6,21:25:63.16:700,63,0	0/1:2,9:11:22.99:152,0,23	0/0:18,0:18:36.11:0,36,480	0/0:11,0:11:30.10:0,30,410	1/1:0,6:6:12.03:136,12,0	1/1:3,7:10:17.88:203,18,0	0/0:15,0:15:30.08:0,30,383	0/0:14,0:14:33.10:0,33,435	0/0:5,0:5:12.04:0,12,164	0/0:24,0:24:54.11:0,54,686	1/1:3,10:12:15.04:170,15,0	0/0:24,0:24:66.18:0,66,840	0/0:11,0:11:33.10:0,33,436	0/0:8,0:8:21.06:0,21,270	1/1:1,10:11:30.07:331,30,0	1/1:2,5:7:11.60:136,12,0	1/1:0,7:7:18.05:204,18,0	0/0:19,0:19:54.18:0,54,737	0/0:21,0:21:63.18:0,63,806	0/0:15,0:14:36.12:0,36,487	0/0:2,0:2:6.02:0,6,82
chr10	74360503	.	CTTCCTCACTT	C	2795.13	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.264;DP=743;FS=7.259;HRun=0;HaplotypeScore=232.8665;InbreedingCoeff=0.8986;MQ=87.37;MQ0=0;MQRankSum=-8.209;QD=79.86;ReadPosRankSum=2.094;VQSLOD=2.6787;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:84.29:2890,84,0	0/0:6,0:6:18.06:0,18,935	0/0:44,0:44:99:0,120,5516	0/0:36,0:33:80.35:0,80,3671	0/0:27,0:27:78.27:0,78,3764	0/0:25,0:25:75.26:0,75,3915	0/0:20,0:20:60.21:0,60,2829	0/0:34,0:34:99:0,102,5182	0/0:28,0:28:84.29:0,84,4258	0/0:31,0:31:93.32:0,93,4728	0/0:12,0:12:36.12:0,36,1896	0/0:31,0:31:93.32:0,93,4513	0/0:31,0:31:93.30:0,93,4429	0/0:35,0:35:99:0,99,5274	0/0:29,0:29:87.30:0,87,4408	0/0:19,0:19:54.19:0,54,2864	0/0:33,0:33:99:0,99,5388	0/0:22,0:22:66.18:0,66,3409	0/0:17,0:17:51.18:0,51,2225	0/0:17,0:17:51.18:0,51,2658	0/0:38,0:38:99:0,114,5793	0/0:17,0:17:48.16:0,48,2455	0/0:16,0:16:48.15:0,48,2059	0/0:45,0:45:99:0,134,6558	0/0:29,0:28:87.30:0,87,4576	0/0:32,0:32:96.33:0,96,4733	0/0:31,0:31:87.30:0,87,4519	0/0:2,0:2:6.02:0,6,224
chr10	74360727	.	GAA	G	3934.39	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=8.747;DP=563;FS=11.200;HRun=11;HaplotypeScore=73.7239;InbreedingCoeff=0.9874;MQ=79.86;MQ0=2;MQRankSum=-1.248;QD=24.90;ReadPosRankSum=0.808;VQSLOD=2.3629;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:32:83.76:0,84,1220	0/0:12,0:12:35.79:0,36,519	0/0:21,0:20:46.72:0,47,483	0/0:16,0:15:18.06:0,18,268	0/0:26,0:27:49.33:0,49,1023	0/0:20,1:23:27.75:0,28,776	0/0:11,0:13:38.61:0,39,545	1/1:3,24:27:66.08:681,66,0	1/1:4,12:16:30.05:319,30,0	0/0:22,0:24:51.15:0,51,731	0/0:20,0:21:59.68:0,60,862	1/1:0,21:21:60.15:639,60,0	1/1:5,14:18:39.08:415,39,0	0/0:13,0:14:32.47:0,32,470	0/0:20,0:20:45.15:0,45,693	0/0:18,0:18:48.16:0,48,738	0/0:27,0:30:80.25:0,80,1169	1/1:4,13:17:33.05:351,33,0	0/0:20,0:20:45.61:0,46,656	0/0:27,0:29:77.97:0,78,1101	0/0:9,0:9:27.09:0,27,416	1/1:5,14:19:42.06:443,42,0	1/1:2,23:25:63.15:671,63,0	1/1:0,14:14:39.10:415,39,0	0/0:19,0:20:48.11:0,48,683	0/0:31,0:31:78.26:0,78,1201	0/0:17,0:19:53.15:0,53,752	0/0:3,0:4:8.52:0,9,101
chr10	74361401	.	CT	C	303.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.114;DP=449;FS=4.125;HRun=7;HaplotypeScore=42.2796;InbreedingCoeff=0.9636;MQ=76.06;MQ0=1;MQRankSum=-0.547;QD=18.94;ReadPosRankSum=0.296;VQSLOD=2.9662;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:16:39.09:398,39,0	0/0:6,0:6:18.06:0,18,226	0/0:13,0:13:36.05:0,36,401	0/0:7,0:7:14.96:0,15,148	0/0:12,0:12:36.10:0,36,440	0/0:21,0:21:57.17:0,57,704	0/0:6,0:6:18.06:0,18,226	0/0:20,0:20:54.17:0,54,679	0/0:10,0:10:27.09:0,27,340	0/0:19,0:19:51.16:0,51,642	0/0:22,0:22:66.19:0,66,806	0/0:15,0:15:42.94:0,43,494	0/0:18,0:18:54.17:0,54,679	0/0:12,0:12:33.11:0,33,415	0/0:14,0:14:39.12:0,39,491	0/0:16,0:16:48.15:0,48,603	0/0:13,0:13:36.12:0,36,453	0/0:26,0:26:69.19:0,69,849	0/0:16,0:16:48.15:0,48,604	0/0:31,0:31:84.21:0,84,1026	0/0:12,0:12:33.11:0,33,415	0/0:10,0:10:27.09:0,27,340	0/0:19,0:18:45.13:0,45,553	0/0:10,0:10:30.09:0,30,365	0/0:23,0:23:60.19:0,60,754	0/0:18,0:18:51.16:0,51,642	0/0:34,0:34:96.28:0,96,1180	0/0:10,0:10:24.08:0,24,302
chr10	74361973	.	CTTT	C	393.52	PASS	AC=10;AF=0.200;AN=50;BaseQRankSum=5.131;DP=299;FS=36.461;HRun=10;HaplotypeScore=59.1566;InbreedingCoeff=0.7791;MQ=41.92;MQ0=13;MQRankSum=-2.840;QD=12.30;ReadPosRankSum=3.198;VQSLOD=-0.5304;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:57.48:0,57,927	0/0:3,0:3:6.02:0,6,102	./.	0/0:6,0:5:3.43:0,3,21	0/0:7,0:7:18.06:0,18,358	0/0:15,0:14:36.12:0,36,709	0/0:10,0:11:32.28:0,32,552	1/1:4,5:8:15:184,15,0	1/1:2,3:4:5.51:81,6,0	0/0:8,0:8:15.05:0,15,290	0/0:9,0:8:9:0,9,145	1/1:4,2:6:5.98:81,6,0	1/1:5,0:4:6.02:76,6,0	0/0:17,0:17:34.82:0,35,567	0/0:13,0:13:27.06:0,27,496	0/0:16,0:17:51.15:0,51,978	0/0:31,2:31:31.81:0,32,1248	1/1:4,3:7:8.99:117,9,0	0/0:14,0:13:30.08:0,30,552	0/0:18,0:16:45.15:0,45,836	0/0:4,0:4:8.99:0,9,144	./.	./.	0/0:1,0:1:0:0,0,0	0/0:12,0:12:24.07:0,24,407	0/0:21,0:20:39.60:0,40,747	0/0:17,0:15:41.50:0,42,782	0/0:10,0:6:18.06:0,18,346
chr10	74362188	.	ATAAATGGAG	A	377.68	PASS	AB=0.854;AC=2;AF=0.036;AN=56;BaseQRankSum=4.791;DP=369;FS=0.000;HRun=0;HaplotypeScore=109.3481;InbreedingCoeff=-0.0523;MQ=73.23;MQ0=0;MQRankSum=-1.425;QD=16.42;ReadPosRankSum=-2.375;VQSLOD=2.1194;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.19:0,63,2856	0/0:1,0:1:3.01:0,3,76	0/0:7,0:7:21.07:0,21,937	0/0:8,0:8:12.83:0,13,607	0/0:14,0:14:42.13:0,42,1802	0/0:13,0:13:39.13:0,39,1877	0/0:10,0:10:30.10:0,30,1446	0/1:10,7:17:99:445,0,104	0/0:15,0:15:42.14:0,42,1692	0/0:18,0:18:48.16:0,48,2256	0/0:14,0:14:42.14:0,42,2001	0/0:17,0:17:51.17:0,51,1907	0/0:14,0:14:42.14:0,42,1591	0/0:16,0:16:45.14:0,45,1967	0/0:10,0:10:27.09:0,27,1185	0/0:9,0:9:27.09:0,27,1220	0/0:25,0:25:75.26:0,75,3446	0/1:6,0:6:20.08:20,0,72	0/0:15,0:15:39.08:0,39,1611	0/0:13,0:13:39.11:0,39,1592	0/0:4,0:4:12.04:0,12,532	0/0:1,0:1:3.01:0,3,100	0/0:18,0:18:48.12:0,48,1845	0/0:17,0:17:48.16:0,48,1860	0/0:15,0:15:45.15:0,45,2059	0/0:17,0:17:48.16:0,48,2318	0/0:25,0:23:66.23:0,66,3143	0/0:8,0:8:24.08:0,24,1160
chr10	74362191	.	A	AACAT	823.73	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.529;DP=374;FS=0.000;HRun=0;HaplotypeScore=73.1980;InbreedingCoeff=0.8296;MQ=73.06;MQ0=0;MQRankSum=-5.181;QD=37.44;ReadPosRankSum=-1.606;VQSLOD=2.8328;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.19:0,63,1209	0/0:2,0:2:6.01:0,6,87	0/0:7,0:7:21.07:0,21,419	0/0:8,0:8:10.16:0,10,283	0/0:14,0:14:42.13:0,42,804	0/0:13,0:13:39.13:0,39,779	0/0:12,0:12:36.10:0,36,651	1/1:10,6:16:41.94:618,42,0	0/0:15,0:15:42.13:0,42,757	0/0:19,0:19:51.17:0,51,988	0/0:15,0:15:45.14:0,45,855	0/0:17,0:17:51.17:0,51,948	0/0:14,0:14:42.14:0,42,776	0/0:15,0:15:45.14:0,45,853	0/0:10,0:10:27.09:0,27,539	0/0:9,0:9:24.08:0,24,470	0/0:26,0:26:78.25:0,78,1509	1/1:2,4:6:15.05:324,15,0	0/0:15,0:15:36.11:0,36,682	0/0:13,0:13:39.11:0,39,709	0/0:5,0:5:12.04:0,12,240	0/0:1,0:1:3.01:0,3,57	0/0:18,0:18:48.12:0,48,843	0/0:18,0:18:48.13:0,48,857	0/0:15,0:15:45.15:0,45,889	0/0:16,0:16:48.16:0,48,959	0/0:24,0:22:66.23:0,66,1318	0/0:8,0:8:24.08:0,24,479
chr10	74362193	.	TG	T	147.98	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.743;DP=368;FS=2.143;HRun=2;HaplotypeScore=49.0224;InbreedingCoeff=0.8336;MQ=72.42;MQ0=0;MQRankSum=-5.005;QD=8.22;ReadPosRankSum=-0.808;VQSLOD=0.7650;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.21:0,66,967	0/0:2,0:2:6.01:0,6,71	0/0:7,0:7:21.07:0,21,305	0/0:6,1:7:12.29:0,12,210	0/0:15,0:15:45.12:0,45,632	0/0:14,0:14:42.14:0,42,628	0/0:12,0:12:36.12:0,36,538	1/1:7,6:13:29.75:183,30,0	0/0:15,0:15:42.14:0,42,629	0/0:19,0:19:57.19:0,57,853	0/0:15,0:15:45.15:0,45,673	0/0:18,0:18:51.17:0,51,760	0/0:15,0:15:42.13:0,42,608	0/0:15,0:15:45.14:0,45,654	0/0:10,0:10:27.08:0,27,385	0/0:9,0:9:27.06:0,27,380	0/0:26,0:26:75.25:0,75,1122	1/1:1,4:5:11.87:81,12,0	0/0:12,0:12:36.12:0,36,539	0/0:11,0:11:33.11:0,33,495	0/0:5,0:5:15.05:0,15,224	0/0:1,0:1:3.01:0,3,45	0/0:16,0:16:45.15:0,45,672	0/0:19,0:19:51.17:0,51,762	0/0:15,0:15:42.14:0,42,629	0/0:17,0:17:51.16:0,51,742	0/0:24,0:22:66.22:0,66,989	0/0:8,0:8:24.08:0,24,360
chr10	74363647	.	AT	A	1417.32	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=7.380;DP=378;FS=0.527;HRun=8;HaplotypeScore=51.3453;InbreedingCoeff=0.8439;MQ=62.52;MQ0=0;MQRankSum=-4.336;QD=17.94;ReadPosRankSum=-1.023;VQSLOD=3.0713;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.13:0,42,506	0/0:5,0:5:12.04:0,12,145	0/0:7,0:7:14.92:0,15,131	0/0:4,0:4:9:0,9,83	0/0:15,0:15:32.68:0,33,360	0/0:21,0:21:63.17:0,63,747	0/0:10,0:10:30.09:0,30,362	0/0:26,0:26:27.30:0,27,186	1/1:3,9:12:27.04:261,27,0	0/0:15,0:15:42.13:0,42,507	0/0:15,0:15:42.11:0,42,486	1/1:3,16:19:48.07:463,48,0	1/1:1,12:13:36.06:347,36,0	0/0:10,0:10:21.05:0,21,241	0/0:19,0:19:42.12:0,42,498	0/0:10,0:10:27.07:0,27,315	0/0:19,0:19:54.12:0,54,636	0/1:11,0:11:31.64:32,0,76	0/0:10,0:10:27.08:0,27,326	0/0:22,0:22:60.17:0,60,714	0/0:3,0:3:9.01:0,9,96	1/1:0,3:3:6.01:58,6,0	1/1:0,12:12:33:308,33,0	1/1:3,6:9:14.96:133,15,0	0/0:27,0:27:60.16:0,60,704	0/0:17,0:17:45.13:0,45,534	0/0:20,0:20:60.15:0,60,699	0/0:9,0:9:24.07:0,24,290
chr10	74363691	.	CGT	C	314.69	PASS	AB=0.916;AC=23;AF=0.479;AN=48;BaseQRankSum=6.165;DP=475;FS=2.784;HRun=0;HaplotypeScore=87.3304;InbreedingCoeff=0.0876;MQ=55.44;MQ0=15;MQRankSum=-1.421;QD=1.12;ReadPosRankSum=3.990;VQSLOD=1.4305;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:16:4.57:19,5,0	0/0:7,0:7:9.03:0,9,130	./.	./.	0/0:16,0:15:9.03:0,9,130	0/1:26,3:29:21.47:21,0,444	0/0:16,0:16:8.99:0,9,91	./.	1/1:4,0:6:5.68:28,6,0	0/1:22,0:21:0.09:0,0,47	0/0:11,0:11:9.01:0,9,130	1/1:9,0:11:5.68:28,6,0	1/1:10,0:15:14.20:70,14,0	0/0:9,0:9:6:0,6,64	0/1:24,2:27:57.55:58,0,165	0/0:18,0:18:12.02:0,12,175	0/1:23,1:24:34.31:34,0,77	0/0:12,0:12:3.01:0,3,37	1/1:20,0:18:2.04:6,2,0	0/1:22,2:24:2.16:2,0,347	0/0:11,1:10:0.47:0,0,1	1/1:1,0:2:2.84:14,3,0	1/1:6,0:9:11.36:56,11,0	./.	0/1:23,4:25:17.34:17,0,160	0/1:18,0:18:12.86:13,0,102	0/1:13,2:15:52.42:52,0,72	0/1:12,3:15:43.38:43,0,198
chr10	74364094	.	C	CA	5838.09	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.758;DP=541;FS=5.726;HRun=2;HaplotypeScore=62.9086;InbreedingCoeff=0.9914;MQ=92.84;MQ0=0;MQRankSum=-1.925;QD=36.95;ReadPosRankSum=0.455;VQSLOD=5.3734;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.24:0,75,929	0/0:8,0:8:21.07:0,21,260	0/0:27,0:27:12.20:0,12,611	0/0:21,0:21:57.15:0,57,678	0/0:20,0:20:60.19:0,60,743	0/0:17,0:17:51.13:0,51,605	0/0:17,0:17:48.15:0,48,595	1/1:1,29:30:84.28:1209,84,0	1/1:1,16:17:48.16:691,48,0	0/0:20,0:20:60.18:0,60,733	0/0:19,0:19:54.17:0,54,669	1/1:0,17:17:45.15:648,45,0	1/1:2,33:35:84.28:1210,84,0	0/0:26,0:26:69.22:0,69,855	0/0:28,0:28:84.26:0,84,1041	0/0:19,0:18:57.17:0,57,696	0/0:15,0:15:45.13:0,45,544	1/1:0,6:6:15.05:216,15,0	0/0:12,0:12:30.07:0,30,349	0/0:20,0:20:60.17:0,60,729	0/0:17,0:17:51.14:0,51,608	1/1:1,17:18:51.13:706,51,0	1/1:3,21:24:51.17:726,51,0	1/1:0,11:11:30.10:432,30,0	0/0:16,0:16:45.14:0,45,558	0/0:26,0:26:75.23:0,75,919	0/0:19,0:19:54.17:0,54,668	0/0:10,0:10:30.09:0,30,372
chr10	74364363	.	G	GGTTTGA	4447.19	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=0.601;DP=371;FS=6.018;HRun=0;HaplotypeScore=69.2893;InbreedingCoeff=0.8880;MQ=50.87;MQ0=16;MQRankSum=-9.751;QD=79.41;ReadPosRankSum=-1.760;VQSLOD=4.9980;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:54.19:0,54,1346	0/0:10,0:9:26.96:0,27,630	0/0:13,0:2:6.02:0,6,133	0/0:36,0:3:6.02:0,6,151	0/0:11,0:11:33.10:0,33,790	0/0:15,0:15:42.14:0,42,1076	0/0:16,0:14:36.11:0,36,842	1/1:1,11:12:33.11:1238,33,0	1/1:0,4:4:6.02:225,6,0	0/0:21,0:21:63.21:0,63,1559	0/0:13,0:13:39.13:0,39,987	1/1:0,4:4:12.04:449,12,0	1/1:0,6:7:15.05:516,15,0	0/0:9,0:8:24.08:0,24,614	0/0:8,0:8:21.07:0,21,538	0/0:9,0:9:27.09:0,27,681	0/0:30,0:30:90.31:0,90,2296	1/1:0,1:2:3.01:112,3,0	0/0:16,0:16:48.15:0,48,1153	0/0:18,0:18:51.18:0,51,1302	0/0:12,0:11:33.11:0,33,845	1/1:0,5:7:18.06:672,18,0	1/1:2,10:14:36.12:1070,36,0	1/1:0,2:3:6.02:166,6,0	0/0:12,0:12:33.11:0,33,841	0/0:24,0:24:69.24:0,69,1767	0/0:13,0:13:39.13:0,39,998	0/0:8,0:8:24.04:0,24,531
chr10	74364413	.	A	AC	700.05	PASS	AB=0.856;AC=10;AF=0.179;AN=56;BaseQRankSum=3.413;DP=520;FS=52.309;HRun=0;HaplotypeScore=77.9459;InbreedingCoeff=0.0480;MQ=53.30;MQ0=24;MQRankSum=-6.475;QD=5.60;ReadPosRankSum=-2.934;VQSLOD=1.2096;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:38.84:0,39,608	0/0:12,0:12:36.09:0,36,448	0/1:52,0:7:0.46:0,0,37	0/0:62,0:14:7.53:0,8,108	0/0:21,0:20:52.03:0,52,662	0/0:17,0:16:48.15:0,48,649	0/0:15,0:14:38.68:0,39,492	0/1:20,10:26:92.92:409,0,93	0/1:8,2:9:57.94:58,0,86	0/0:30,0:28:77.95:0,78,973	0/0:30,0:30:90.22:0,90,1177	0/1:5,0:5:13.95:14,0,26	1/1:1,2:3:6.02:82,6,0	0/0:10,0:10:24.02:0,24,283	0/0:12,0:11:30.09:0,30,383	0/0:6,0:5:15.03:0,15,167	0/0:24,0:24:72.04:0,72,920	0/1:3,1:4:6.64:39,0,7	0/0:25,0:23:66.15:0,66,814	0/0:16,0:16:48.11:0,48,603	0/0:8,0:8:13.29:0,13,171	0/1:6,3:7:26.75:99,0,27	0/1:6,3:10:40.77:130,0,41	0/1:2,0:2:5.56:6,0,18	0/0:14,0:14:33.06:0,33,415	0/0:36,0:36:99:0,102,1346	0/0:26,0:26:75.18:0,75,970	0/0:8,0:8:24.08:0,24,335
chr10	74364419	.	A	AC	474.83	PASS	AB=0.877;AC=10;AF=0.179;AN=56;BaseQRankSum=5.470;DP=521;FS=23.473;HRun=0;HaplotypeScore=87.9800;InbreedingCoeff=0.2797;MQ=54.89;MQ0=21;MQRankSum=-4.176;QD=3.19;ReadPosRankSum=0.568;VQSLOD=1.5382;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,12:24:44.27:515,44,0	0/0:12,0:12:23.42:0,23,376	0/1:49,0:10:14.04:14,0,67	0/0:59,0:17:24.21:0,24,162	0/0:24,0:23:56.32:0,56,575	0/0:16,0:15:45:0,45,501	0/0:15,0:14:39.93:0,40,367	0/1:30,0:28:1.58:2,0,205	0/1:9,0:9:3.94:4,0,58	0/0:28,0:27:79.66:0,80,866	0/0:30,0:30:81.62:0,82,839	0/1:5,0:6:1.83:2,0,35	0/1:3,0:3:2.42:2,0,3	0/0:11,0:11:27.05:0,27,303	0/0:14,0:13:29.72:0,30,411	0/0:5,0:5:15.04:0,15,180	0/0:22,0:22:62.90:0,63,705	0/0:4,0:4:5.72:0,6,29	0/0:26,0:24:60.62:0,61,673	0/0:15,0:15:42.03:0,42,517	0/0:10,0:10:18.86:0,19,192	0/1:8,0:9:1.28:33,0,1	0/1:9,0:11:28.68:29,0,68	0/1:1,0:2:0.94:1,0,4	0/0:12,0:12:26.96:0,27,250	0/0:36,0:36:95.77:0,96,1072	0/0:25,0:25:65.20:0,65,646	0/0:8,0:8:24.04:0,24,266
chr10	74365300	.	G	GA	853.19	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=8.252;DP=492;FS=0.623;HRun=8;HaplotypeScore=71.9580;InbreedingCoeff=0.9037;MQ=53.14;MQ0=12;MQRankSum=-7.221;QD=13.54;ReadPosRankSum=-0.275;VQSLOD=3.3564;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:53.69:0,54,487	0/0:7,0:7:18:0,18,165	./.	0/0:7,1:4:2.34:0,2,45	0/0:32,1:32:56.92:0,57,539	0/0:14,0:14:42.02:0,42,384	0/0:17,0:14:26.84:0,27,246	0/0:19,0:17:8.08:0,8,172	1/1:4,6:10:20.78:205,21,0	0/0:18,0:17:29.95:0,30,266	0/0:34,0:34:69:0,69,625	1/1:1,8:10:21:207,21,0	1/1:6,2:8:7.83:70,8,0	0/0:17,0:17:38.68:0,39,334	0/0:19,0:17:42.01:0,42,384	0/0:25,0:25:57.01:0,57,520	0/0:27,0:27:72:0,72,652	0/0:13,0:12:17.91:0,18,155	0/0:26,0:25:56.52:0,57,517	0/0:29,0:29:68.99:0,69,622	0/0:19,0:18:42:0,42,384	1/1:5,7:12:29.92:284,30,0	1/1:6,8:14:23.91:219,24,0	1/1:4,5:8:5.85:44,6,0	0/0:20,0:20:41.98:0,42,384	0/0:17,0:17:35.93:0,36,324	0/0:19,1:20:38.97:0,39,357	0/0:15,0:15:33:0,33,300
chr10	74365310	.	AAAAAG	A	1480.52	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=8.276;DP=553;FS=14.680;HRun=0;HaplotypeScore=112.0776;InbreedingCoeff=0.9200;MQ=55.60;MQ0=11;MQRankSum=-5.425;QD=15.26;ReadPosRankSum=-3.985;VQSLOD=0.9408;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:21.62:0,22,979	0/0:9,0:9:24.08:0,24,583	0/1:14,0:6:2.50:3,0,66	0/0:11,0:7:13.28:0,13,246	0/0:30,0:29:87.09:0,87,1801	0/0:15,0:15:42.11:0,42,994	0/0:18,0:16:42.01:0,42,880	0/0:33,0:31:51.18:0,51,1018	1/1:12,1:13:26.98:302,27,0	0/0:17,0:16:14.35:0,14,1011	0/0:29,0:29:78.17:0,78,1709	1/1:13,2:15:26.72:307,27,0	1/1:13,0:13:22:163,22,0	0/0:17,0:17:42.03:0,42,894	0/0:21,0:19:36.78:0,37,1170	0/0:25,0:25:39.99:0,40,1513	0/0:34,0:34:99:0,99,2180	0/0:14,0:12:21.07:0,21,448	0/0:27,0:26:65.70:0,66,1310	0/0:26,0:26:75.22:0,75,1576	0/0:15,0:15:41.94:0,42,976	1/1:10,6:16:37.50:387,37,0	1/1:16,2:18:36.65:380,37,0	1/1:5,3:8:14.90:126,15,0	0/0:24,0:24:69.13:0,69,1509	0/0:23,0:23:38.81:0,39,1106	0/0:24,0:24:40.45:0,40,1204	0/0:16,0:16:23.97:0,24,483
chr10	74365312	.	AAAG	A	889.47	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=10.988;DP=548;FS=8.372;HRun=0;HaplotypeScore=94.0492;InbreedingCoeff=0.8810;MQ=55.78;MQ0=9;MQRankSum=-6.932;QD=8.81;ReadPosRankSum=-4.500;VQSLOD=0.7780;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:45.58:0,46,661	0/0:8,0:8:24.06:0,24,407	0/1:14,0:6:0.43:0,0,96	0/0:11,0:7:0.39:0,0,163	0/0:29,0:29:87.03:0,87,1329	0/0:15,0:15:40.92:0,41,705	0/0:17,0:15:41.90:0,42,648	0/0:32,0:30:9.15:0,9,522	1/1:12,1:13:23.85:181,24,0	0/0:19,0:18:34.72:0,35,753	0/0:29,0:29:78.18:0,78,1244	1/1:16,1:17:26.24:222,26,0	1/1:13,0:13:19.40:137,19,0	0/0:16,0:16:42:0,42,626	0/0:20,0:19:36.59:0,37,834	0/0:24,0:24:61.65:0,62,1083	0/0:34,0:34:99:0,99,1587	0/0:13,0:11:21.02:0,21,274	0/0:28,0:27:61.06:0,61,992	0/0:25,0:25:73.91:0,74,1152	0/0:16,0:16:41.72:0,42,683	1/1:16,0:16:26.89:262,27,0	1/1:18,1:19:23.58:199,24,0	1/1:8,1:9:13.73:72,14,0	0/0:24,0:24:65.23:0,65,1059	0/0:21,0:21:48.79:0,49,822	0/0:24,0:24:64.66:0,65,936	0/0:14,0:14:23.90:0,24,364
chr10	74365315	.	G	GA	1523.56	PASS	AB=0.883;AC=20;AF=0.357;AN=56;BaseQRankSum=7.428;DP=547;FS=15.805;HRun=12;HaplotypeScore=73.2344;InbreedingCoeff=0.4692;MQ=56.92;MQ0=8;MQRankSum=-1.525;QD=6.37;ReadPosRankSum=-4.343;VQSLOD=-0.3234;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:6,20:26:44.91:423,45,0	0/0:7,0:8:22.92:0,23,159	0/0:13,0:7:1.19:0,1,45	0/1:16,0:9:17.10:17,0,44	0/0:27,0:28:35.25:0,35,403	0/0:13,0:14:34.82:0,35,247	0/0:16,0:15:37.80:0,38,265	1/1:8,4:35:65.65:372,66,0	1/1:8,4:12:18.15:116,18,0	0/1:17,3:19:31.39:31,0,236	0/0:30,0:31:58.63:0,59,421	1/1:14,2:16:4.17:115,4,0	1/1:13,1:14:17.22:116,17,0	0/1:14,0:15:23.34:23,0,161	0/0:17,2:19:10.20:0,10,228	0/0:24,1:25:27.43:0,27,362	0/0:30,0:34:83.53:0,84,576	0/1:4,1:12:15.35:66,0,15	0/1:23,3:26:22.63:23,0,275	0/0:23,1:25:25.37:0,25,326	0/0:15,0:15:34.45:0,34,234	1/1:15,0:15:29.12:174,29,0	0/1:17,1:18:23.69:147,0,24	1/1:8,1:9:12.48:95,12,0	0/0:21,0:22:59.85:0,60,403	0/0:20,0:20:42.36:0,42,296	0/0:26,0:26:22.70:0,23,315	0/0:7,0:8:18.19:0,18,118
chr10	74365847	.	CA	C	1744.41	PASS	AB=0.786;AC=33;AF=0.589;AN=56;BaseQRankSum=6.283;DP=441;FS=7.451;HRun=14;HaplotypeScore=59.1946;InbreedingCoeff=0.2455;MQ=80.36;MQ0=0;MQRankSum=1.297;QD=5.38;ReadPosRankSum=3.048;VQSLOD=1.9324;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:25:14.93:66,15,0	0/1:5,0:5:7.20:7,0,68	0/1:28,3:24:59.32:59,0,65	0/1:14,1:12:19.34:23,0,19	0/0:36,1:38:32.58:0,33,601	0/0:11,0:13:32.87:0,33,293	0/0:11,0:11:20.39:0,20,175	1/1:2,0:24:42.13:122,42,0	1/1:2,6:8:8.91:62,9,0	0/1:14,2:16:8.14:8,0,213	0/0:22,0:22:39.92:0,40,360	1/1:6,8:14:29.55:198,30,0	1/1:4,6:11:9.74:65,10,0	0/1:8,2:10:5.62:6,0,82	0/0:13,2:16:2.54:0,3,181	0/1:6,2:8:5.61:6,0,85	0/0:15,2:17:9.40:0,9,216	1/1:3,0:10:14.24:41,14,0	1/1:7,11:20:14.88:230,15,0	0/1:8,6:16:4.23:75,0,4	1/1:5,8:15:21.87:135,22,0	0/1:1,6:9:8.68:88,0,9	1/1:1,7:8:14.88:103,15,0	0/1:4,7:12:5.01:106,0,5	0/1:13,3:17:5.29:5,0,229	1/1:5,18:25:29.49:321,29,0	0/1:7,11:18:35.50:114,0,36	1/1:1,4:6:13.90:88,14,0
chr10	74367991	.	A	AG	4671.25	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.911;DP=576;FS=5.331;HRun=3;HaplotypeScore=76.6249;InbreedingCoeff=0.9922;MQ=82.44;MQ0=0;MQRankSum=-12.198;QD=36.21;ReadPosRankSum=-0.035;VQSLOD=5.2706;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,8:9:24.04:313,24,0	0/0:11,0:11:30.09:0,30,360	0/0:17,0:17:47.88:0,48,570	0/0:21,0:21:48.91:0,49,595	0/0:35,0:35:99:0,99,1187	0/0:23,0:23:63.19:0,63,756	0/0:16,0:16:42.10:0,42,482	0/0:28,0:28:69.20:0,69,820	1/1:4,13:17:45.14:611,45,0	0/0:33,0:33:96.29:0,96,1150	0/0:35,0:35:99:0,102,1215	1/1:4,14:18:48.12:647,48,0	1/1:3,27:30:81.27:1123,81,0	0/0:28,0:28:75.23:0,75,900	0/0:19,0:19:54.17:0,54,648	0/0:19,0:19:57.14:0,57,651	0/0:17,0:17:45.14:0,45,539	0/0:9,0:9:27.08:0,27,324	0/0:17,0:17:51.15:0,51,603	0/0:28,0:28:84.26:0,84,1006	0/0:17,0:17:42.13:0,42,504	1/1:1,22:23:66.22:922,66,0	1/1:1,20:21:60.20:838,60,0	1/1:4,6:10:17.77:217,18,0	0/0:19,0:19:57.17:0,57,684	0/0:22,0:22:63.19:0,63,756	0/0:29,0:29:84.21:0,84,982	0/0:4,0:4:12.04:0,12,144
chr10	74368002	.	T	TA	3866.96	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.205;DP=583;FS=7.537;HRun=3;HaplotypeScore=84.9032;InbreedingCoeff=0.9823;MQ=83.84;MQ0=0;MQRankSum=-13.649;QD=30.69;ReadPosRankSum=0.726;VQSLOD=3.2372;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:9:20.14:291,20,0	0/0:8,0:8:24.07:0,24,288	0/0:18,0:18:41.59:0,42,469	0/0:22,0:22:53.94:0,54,613	0/0:36,0:36:99:0,105,1236	0/0:23,0:23:63.19:0,63,754	0/0:16,0:16:45.11:0,45,516	0/0:35,0:35:93.27:0,93,1098	1/1:1,18:19:42.14:574,42,0	0/0:40,0:40:99:0,108,1251	0/0:37,0:37:99:0,99,1187	1/1:1,15:16:45.14:603,45,0	1/1:4,24:28:60.06:821,60,0	0/0:25,0:25:75.22:0,75,890	0/0:19,0:19:51.11:0,51,577	0/0:17,0:17:51.16:0,51,611	0/0:15,0:15:45.13:0,45,528	0/0:9,0:9:27.08:0,27,321	0/0:16,0:16:45.14:0,45,540	0/0:28,0:28:78.22:0,78,923	0/0:17,0:17:48.11:0,48,544	1/1:3,19:22:60.19:797,60,0	1/1:4,19:23:51.07:657,51,0	1/1:2,6:8:9.03:123,9,0	0/0:20,0:20:60.16:0,60,707	0/0:25,0:25:69.21:0,69,825	0/0:25,0:25:69.21:0,69,828	0/0:6,0:6:12.04:0,12,144
chr10	74368315	.	C	CAAACAAAACA	12656.81	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=6.859;DP=718;FS=4.837;HRun=0;HaplotypeScore=233.6637;InbreedingCoeff=0.9875;MQ=62.19;MQ0=0;MQRankSum=-12.242;QD=55.03;ReadPosRankSum=-5.408;VQSLOD=3.3968;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:29,19:52:63.21:2766,63,0	0/0:12,0:12:27.08:0,27,711	0/0:35,0:33:22.30:0,22,462	0/0:34,0:32:38.81:0,39,1028	0/0:27,0:27:48.16:0,48,1414	0/0:25,0:25:60.21:0,60,1778	0/0:18,0:18:41.88:0,42,1163	1/1:24,0:36:39.07:546,39,0	1/1:19,4:23:33.11:1195,33,0	0/0:30,0:30:60.21:0,60,1712	0/0:30,0:30:69.21:0,69,1904	1/1:12,12:24:45.15:2006,45,0	1/1:14,6:20:42.14:1680,42,0	0/0:25,0:25:57.20:0,57,1644	0/0:36,0:36:66.20:0,66,1858	0/0:18,0:18:36.12:0,36,1053	0/0:30,0:30:75.22:0,75,2080	1/1:5,0:12:15.04:211,15,0	0/0:23,0:23:33.11:0,33,879	0/0:28,0:28:54.17:0,54,1537	0/0:34,0:34:75.24:0,75,2129	1/1:16,7:23:42.13:1694,42,0	1/1:13,4:17:36.12:1280,36,0	1/1:17,6:23:34.83:1280,35,0	0/0:17,0:17:33.11:0,33,992	0/0:32,0:32:69.21:0,69,1862	0/0:28,0:28:69.21:0,69,1937	0/0:6,0:6:9:0,9,177
chr10	74368361	.	GA	G	4476.67	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=13.890;DP=694;FS=2.786;HRun=1;HaplotypeScore=109.3284;InbreedingCoeff=0.9999;MQ=74.44;MQ0=0;MQRankSum=-7.925;QD=37.31;ReadPosRankSum=2.663;VQSLOD=4.9325;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,105,1659	0/0:10,0:10:30.10:0,30,480	0/0:28,0:28:78.24:0,78,1188	0/0:22,0:22:63.18:0,63,948	0/0:24,0:24:72.23:0,72,1126	0/0:31,0:31:93.30:0,93,1461	0/0:17,0:17:51.17:0,51,815	0/0:32,0:32:96.30:0,96,1487	1/1:0,21:21:60.20:838,60,0	0/0:31,0:31:93.32:0,93,1486	0/0:35,0:35:99:0,102,1630	1/1:0,24:24:69.23:963,69,0	1/1:0,15:15:42.14:583,42,0	0/0:30,0:30:90.28:0,90,1393	0/0:29,0:29:87.28:0,87,1368	0/0:17,0:17:51.17:0,51,814	0/0:29,0:29:87.27:0,87,1323	0/0:20,0:20:54.18:0,54,863	0/0:25,0:25:75.25:0,75,1156	0/0:28,0:28:84.29:0,84,1333	0/0:30,0:30:90.24:0,90,1343	1/1:0,21:21:54.18:754,54,0	1/1:0,16:16:45.15:628,45,0	1/1:0,23:23:51.04:711,51,0	0/0:18,0:18:54.18:0,54,854	0/0:38,0:38:99:0,111,1755	0/0:33,0:33:99:0,99,1582	./.
chr10	74369513	.	AAAAAAAGAAG	A	2265.90	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=11.516;DP=456;FS=11.355;HRun=0;HaplotypeScore=137.7525;InbreedingCoeff=0.7730;MQ=56.33;MQ0=5;MQRankSum=-6.563;QD=18.57;ReadPosRankSum=0.345;VQSLOD=2.2581;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:18.06:405,18,0	0/0:7,0:7:21.07:0,21,812	0/0:27,0:6:12.56:0,13,245	0/0:14,0:7:12.01:0,12,138	0/0:29,0:29:81.20:0,81,2816	0/0:9,0:9:27.05:0,27,688	0/0:14,0:14:39.02:0,39,1364	0/1:32,0:31:2.14:637,0,2	0/0:14,0:13:21.01:0,21,517	1/1:11,0:11:9.05:175,9,0	1/1:17,0:17:36.02:495,36,0	0/0:13,0:13:33.10:0,33,968	0/0:12,0:10:27.05:0,27,714	0/0:13,0:13:36.07:0,36,1273	0/0:16,0:15:39.11:0,39,1434	0/0:8,0:8:23.44:0,23,818	0/0:34,0:34:91:0,91,3367	0/1:14,0:14:26.07:160,0,26	0/0:13,0:13:33.07:0,33,1116	0/0:20,0:20:60.13:0,60,2304	0/0:11,0:11:30.10:0,30,1161	0/0:7,0:6:15.01:0,15,391	0/0:10,0:10:19.82:0,20,506	0/0:17,0:17:39.11:0,39,1044	1/1:22,1:22:32.95:558,33,0	0/0:20,0:20:57.14:0,57,1986	0/0:16,0:15:39.13:0,39,1501	0/0:10,0:10:24.08:0,24,1072
chr10	74369514	.	AAAAAAGAAG	A	3422.50	PASS	AB=0.933;AC=11;AF=0.196;AN=56;BaseQRankSum=11.637;DP=457;FS=8.860;HRun=0;HaplotypeScore=127.3379;InbreedingCoeff=0.8650;MQ=56.37;MQ0=5;MQRankSum=-6.528;QD=28.29;ReadPosRankSum=-0.278;VQSLOD=2.6779;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:18.03:282,18,0	0/0:7,0:7:21.04:0,21,715	0/0:26,0:6:11.64:0,12,200	0/0:14,0:7:12.03:0,12,148	0/0:29,0:29:78.18:0,78,2530	0/0:9,0:9:27.04:0,27,646	0/0:14,0:14:39.02:0,39,1261	1/1:32,1:32:33.49:974,33,0	0/0:14,0:13:15.05:0,15,426	1/1:0,11:11:18.03:291,18,0	1/1:0,17:17:36.04:815,36,0	0/0:13,0:13:33.10:0,33,826	0/0:12,0:10:27.04:0,27,611	0/0:12,0:12:36.03:0,36,1164	0/0:17,0:16:39.12:0,39,1345	0/0:8,0:8:22.89:0,23,743	0/0:34,0:34:93.04:0,93,3056	0/1:13,1:14:10.86:263,0,11	0/0:14,0:14:36.01:0,36,1037	0/0:21,0:21:63.10:0,63,2133	0/0:11,0:11:30.10:0,30,1056	0/0:7,0:6:12.04:0,12,321	0/0:10,0:10:16.16:0,16,422	0/0:17,0:17:33.11:0,33,871	1/1:4,17:20:25.78:797,26,0	0/0:21,0:21:60.13:0,60,1860	0/0:16,0:15:39.09:0,39,1300	0/0:10,0:10:24.06:0,24,954
chr10	74369515	.	AAAAAGAAG	A	3630.99	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.431;DP=458;FS=7.572;HRun=0;HaplotypeScore=119.9861;InbreedingCoeff=0.9578;MQ=56.54;MQ0=4;MQRankSum=-6.618;QD=30.26;ReadPosRankSum=-0.729;VQSLOD=2.5509;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:17.95:266,18,0	0/0:7,0:7:21:0,21,669	0/0:25,0:6:8.23:0,8,138	0/0:13,0:7:12.03:0,12,147	0/0:29,0:29:77.68:0,78,2261	0/0:9,0:9:24.03:0,24,559	0/0:14,0:14:39.01:0,39,1154	1/1:4,28:31:84.07:1557,84,0	0/0:14,0:13:15.05:0,15,370	1/1:11,0:11:16.28:223,16,0	1/1:17,0:17:36.04:583,36,0	0/0:13,0:13:30.10:0,30,639	0/0:11,0:10:18.93:0,19,467	0/0:12,0:12:36.01:0,36,1061	0/0:17,0:16:39.12:0,39,1221	0/0:8,0:8:22.62:0,23,668	0/0:34,0:34:88.85:0,89,2714	1/1:4,10:14:14.92:425,15,0	0/0:15,0:15:39.03:0,39,1020	0/0:21,0:21:60.58:0,61,1917	0/0:11,0:11:30.10:0,30,954	0/0:7,0:6:12.04:0,12,265	0/0:11,0:11:18.76:0,19,405	0/0:17,0:17:33.11:0,33,755	1/1:21,0:20:21.27:577,21,0	0/0:21,0:21:60.11:0,60,1666	0/0:17,0:16:45.12:0,45,1279	0/0:11,0:11:30.08:0,30,953
chr10	74369518	.	AAG	A	830.58	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=12.399;DP=449;FS=1.065;HRun=0;HaplotypeScore=83.6817;InbreedingCoeff=0.5789;MQ=57.10;MQ0=4;MQRankSum=-6.398;QD=4.59;ReadPosRankSum=2.408;VQSLOD=2.3340;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:25:16.76:90,17,0	0/0:7,0:7:18:0,18,244	0/1:22,0:5:3.33:3,0,37	0/0:12,0:7:9.53:0,10,54	0/0:28,1:29:62.41:0,62,768	0/0:9,0:9:17.94:0,18,191	0/0:15,0:15:36:0,36,455	1/1:30,0:29:54.36:387,54,0	0/1:12,0:11:10.37:10,0,37	1/1:11,0:11:11.19:67,11,0	1/1:17,0:17:28.33:147,28,0	0/1:13,0:13:11.31:33,0,11	0/1:11,0:10:10.53:29,0,11	0/0:12,0:12:26.87:0,27,371	0/0:15,0:14:35.96:0,36,450	0/0:8,0:8:19.48:0,19,229	0/0:33,0:34:73.62:0,74,965	1/1:14,0:14:17.69:91,18,0	0/0:15,0:15:32.80:0,33,375	0/0:22,1:23:43.87:0,44,729	0/0:11,0:11:25.43:0,25,320	0/1:7,0:6:1.58:2,0,18	0/0:11,0:11:0.91:0,1,59	0/0:15,0:15:4.48:0,4,103	1/1:19,0:19:28.91:157,29,0	0/0:20,0:20:40.70:0,41,566	0/0:14,3:16:38.85:0,39,459	0/0:15,0:15:38.88:0,39,425
chr10	74371306	.	A	AAAAC	6124.76	PASS	AB=0.575;AC=11;AF=0.196;AN=56;BaseQRankSum=-12.118;DP=675;FS=13.027;HRun=0;HaplotypeScore=117.6251;InbreedingCoeff=0.9384;MQ=65.57;MQ0=4;MQRankSum=0.927;QD=42.53;ReadPosRankSum=2.382;VQSLOD=4.8913;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:34.37:0,34,1139	0/0:12,0:12:21.07:0,21,337	0/0:34,0:26:17.56:0,18,287	0/0:30,0:26:45.12:0,45,648	0/0:30,0:30:57.19:0,57,884	0/0:24,0:24:48.15:0,48,749	0/0:20,0:20:24.08:0,24,381	0/0:34,0:34:53.62:0,54,732	1/1:8,11:20:33.11:794,33,0	0/0:6,0:19:38.88:0,39,349	0/0:5,0:24:50.43:0,50,455	1/1:9,14:23:39.13:938,39,0	1/1:5,21:27:48.16:1154,48,0	0/0:22,0:22:48.13:0,48,703	0/0:27,0:27:57.19:0,57,916	0/0:21,0:21:39.13:0,39,605	0/0:26,0:25:50.20:0,50,777	0/0:20,0:20:47.75:0,48,733	0/0:21,0:17:14.99:0,15,187	0/0:22,0:22:57.19:0,57,907	0/0:20,0:20:33.11:0,33,530	0/1:6,16:22:0.04:1032,0,0	1/1:8,21:29:55.43:1268,55,0	1/1:7,15:22:39.13:938,39,0	0/0:5,0:18:39.04:0,39,363	0/0:33,0:33:63.21:0,63,991	0/0:28,0:28:57.19:0,57,915	0/0:10,0:10:30.07:0,30,434
chr10	74372937	.	G	GC	8187.23	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-8.344;DP=744;FS=12.568;HRun=0;HaplotypeScore=69.3344;InbreedingCoeff=0.9999;MQ=83.66;MQ0=0;MQRankSum=-0.084;QD=42.20;ReadPosRankSum=-1.369;VQSLOD=3.8153;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,55:56:99:2157,135,0	0/0:13,0:13:39.13:0,39,545	0/0:22,0:22:61.42:0,61,806	0/0:27,0:27:69.38:0,69,955	0/0:20,0:20:57.19:0,57,796	0/0:17,0:17:48.16:0,48,670	0/0:29,0:29:87.29:0,87,1217	1/1:0,39:39:99:1813,117,0	0/0:18,0:18:54.18:0,54,753	1/1:0,30:30:90.31:1436,90,0	1/1:0,25:25:69.24:1103,69,0	0/0:20,0:20:60.19:0,60,822	0/0:26,0:26:78.26:0,78,1080	0/0:26,0:26:78.19:0,78,1020	0/0:25,0:25:75.24:0,75,1031	0/0:33,0:33:96.29:0,96,1307	0/0:29,0:29:87.26:0,87,1195	1/1:1,17:18:45.15:719,45,0	0/0:21,0:21:60.20:0,60,839	0/0:31,0:31:90.29:0,90,1238	0/0:46,0:46:99:0,135,1886	0/0:24,0:24:72.23:0,72,988	0/0:26,0:26:78.26:0,78,1086	0/0:25,0:25:72.23:0,72,987	1/1:1,25:26:60.20:959,60,0	0/0:26,1:27:30.29:0,30,1000	0/0:33,0:33:99:0,99,1381	0/0:12,0:12:36.12:0,36,503
chr10	74375104	.	GTT	G	1552.60	PASS	AB=0.716;AC=17;AF=0.304;AN=56;BaseQRankSum=10.105;DP=533;FS=2.754;HRun=17;HaplotypeScore=79.2006;InbreedingCoeff=0.7048;MQ=66.54;MQ0=4;MQRankSum=0.464;QD=8.30;ReadPosRankSum=6.925;VQSLOD=0.8636;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:33:24.13:172,24,0	0/0:8,0:8:14.90:0,15,128	0/0:34,0:13:6.63:0,7,87	0/0:23,0:11:6.02:0,6,69	0/0:25,0:27:48.19:0,48,503	0/0:12,0:18:18.18:0,18,193	0/0:14,0:17:36.86:0,37,386	0/0:17,0:22:25.26:0,25,181	1/1:4,10:14:20.36:159,20,0	0/1:17,1:20:28.56:29,0,58	0/1:5,2:15:24.53:25,0,102	1/1:4,14:18:35.65:279,36,0	1/1:6,9:15:26.33:213,26,0	0/0:19,0:19:29.43:0,29,334	0/0:7,0:11:28.87:0,29,270	0/0:19,0:19:36.32:0,36,356	0/0:26,0:26:51.08:0,51,592	0/0:2,0:18:24.81:0,25,97	0/0:15,1:17:14.41:0,14,309	0/0:21,0:21:38.38:0,38,420	0/0:9,0:9:9.01:0,9,99	1/1:2,14:16:35.34:278,35,0	1/1:2,9:11:23.33:188,23,0	1/1:5,21:26:49.90:401,50,0	0/1:10,1:19:9.02:9,0,51	0/0:22,0:26:46.29:0,46,377	0/0:23,0:26:64.25:0,64,593	0/0:4,0:4:11.40:0,11,122
chr10	74375541	.	T	TA	1731.68	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-8.493;DP=475;FS=1.687;HRun=9;HaplotypeScore=46.8139;InbreedingCoeff=0.9890;MQ=83.37;MQ0=0;MQRankSum=-2.798;QD=24.05;ReadPosRankSum=0.636;VQSLOD=4.3181;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:62.92:0,63,538	0/0:7,0:7:21:0,21,182	0/0:15,0:18:16.05:0,16,225	0/0:12,0:12:20.56:0,21,180	0/0:27,0:27:65.69:0,66,548	0/0:23,1:24:35.78:0,36,534	0/0:13,0:13:29.97:0,30,256	0/0:18,0:18:44.98:0,45,388	1/1:0,10:10:24.02:252,24,0	0/0:21,0:21:59.99:0,60,521	0/0:18,0:18:47.98:0,48,417	1/1:2,18:20:28.10:538,28,0	1/1:1,15:16:36.10:398,36,0	0/0:23,0:23:53.96:0,54,464	0/0:20,0:21:59.98:0,60,521	0/0:8,0:8:20.99:0,21,182	0/0:24,0:24:65.98:0,66,573	0/0:14,0:14:35.98:0,36,313	0/0:18,0:18:35.98:0,36,310	0/0:18,0:18:50.99:0,51,442	0/0:22,0:22:59.98:0,60,521	1/1:0,11:11:30.08:332,30,0	1/1:1,7:8:18.05:199,18,0	1/1:0,7:7:18.05:199,18,0	0/0:17,0:18:44:0,44,366	0/0:21,0:21:47.97:0,48,417	0/0:25,0:25:65.93:0,66,569	0/0:8,0:8:18:0,18,156
chr10	74375849	.	TA	T	2461.44	PASS	AB=0.667;AC=13;AF=0.232;AN=56;BaseQRankSum=9.838;DP=491;FS=0.405;HRun=11;HaplotypeScore=49.7124;InbreedingCoeff=0.8865;MQ=72.06;MQ0=1;MQRankSum=-0.341;QD=17.46;ReadPosRankSum=-0.332;VQSLOD=4.1945;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:18:38.95:320,39,0	0/0:12,0:12:36.08:0,36,375	0/0:19,0:12:20.51:0,21,161	0/0:12,0:9:20.90:0,21,192	0/0:33,0:33:90.15:0,90,936	0/0:26,0:26:65.36:0,65,667	0/0:11,0:11:21.05:0,21,224	1/1:3,19:22:56.86:455,57,0	0/0:13,0:13:30.08:0,30,320	1/1:4,23:27:65.86:535,66,0	1/1:2,23:25:65.86:534,66,0	0/0:24,0:24:69.13:0,69,717	0/0:13,0:13:30.04:0,30,308	0/0:15,0:15:36.07:0,36,374	0/0:11,0:11:29.89:0,30,295	0/0:12,0:12:32.75:0,33,331	0/0:23,0:23:65.98:0,66,677	1/1:4,17:21:35.93:296,36,0	0/0:18,0:18:45.11:0,45,477	0/0:26,0:26:78.11:0,78,795	0/1:1,1:2:18.63:19,0,26	0/0:11,0:11:30.07:0,30,318	0/0:12,1:13:11.44:0,11,319	0/0:12,0:12:27.06:0,27,281	1/1:2,24:26:59.93:493,60,0	0/0:17,0:17:39.08:0,39,403	0/0:23,0:23:66.16:0,66,697	0/0:4,0:4:12.03:0,12,128
chr10	74377446	.	AT	A	7712.56	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=15.314;DP=566;FS=4.803;HRun=7;HaplotypeScore=54.6137;InbreedingCoeff=0.9941;MQ=72.99;MQ0=0;MQRankSum=-1.466;QD=27.74;ReadPosRankSum=0.644;VQSLOD=5.5523;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:31:87.20:888,87,0	0/0:11,0:11:33.11:0,33,415	0/0:7,0:7:14.95:0,15,153	0/0:10,0:11:14.51:0,15,173	0/0:27,0:27:78.23:0,78,957	0/0:26,0:26:66.21:0,66,830	0/0:10,0:10:27.09:0,27,339	1/1:1,32:33:96.22:979,96,0	1/1:1,28:29:78.18:796,78,0	1/1:0,27:27:81.18:826,81,0	1/1:3,27:30:78.17:796,78,0	1/1:1,16:17:45.10:459,45,0	1/1:0,25:25:72.16:734,72,0	0/0:20,0:20:57.15:0,57,683	0/0:18,0:18:48.15:0,48,603	0/0:13,0:13:30.08:0,30,364	0/0:21,0:21:57.18:0,57,717	1/1:1,13:14:36.08:367,36,0	0/0:22,0:22:60.18:0,60,743	0/0:31,0:31:87.28:0,87,1091	0/0:13,0:13:36.12:0,36,453	1/1:1,10:11:24.05:245,24,0	1/1:2,24:26:66.14:673,66,0	1/1:0,8:8:21.05:214,21,0	1/1:3,24:27:72.16:735,72,0	0/0:27,0:27:78.24:0,78,970	0/0:20,0:20:54.17:0,54,679	0/0:11,0:11:33.11:0,33,415
chr10	74378296	.	ATG	A	6206.97	PASS	AB=0.917;AC=13;AF=0.232;AN=56;BaseQRankSum=11.844;DP=651;FS=2.018;HRun=0;HaplotypeScore=84.5058;InbreedingCoeff=0.8984;MQ=57.93;MQ0=5;MQRankSum=-0.525;QD=35.47;ReadPosRankSum=-0.611;VQSLOD=6.9055;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:41:99:1744,114,0	0/0:11,0:10:30.10:0,30,577	0/0:23,0:13:39.13:0,39,701	0/0:22,0:15:41.72:0,42,667	0/0:20,0:20:51.17:0,51,984	0/0:17,0:17:48.13:0,48,860	0/0:29,0:29:87.30:0,87,1671	1/1:3,30:32:87.26:1286,87,0	0/0:23,0:23:69.24:0,69,1332	1/1:1,20:20:57.19:873,57,0	1/1:0,10:9:24.08:367,24,0	0/0:23,0:23:66.23:0,66,1268	0/0:30,0:30:87.28:0,87,1630	0/0:22,0:22:63.21:0,63,1216	0/0:24,0:24:72.25:0,72,1381	0/0:27,0:27:81.26:0,81,1530	0/0:40,0:40:99:0,114,2200	1/1:3,30:33:90.31:1369,90,0	0/0:12,0:10:24.08:0,24,464	0/0:12,0:12:33.11:0,33,636	0/0:49,0:49:99:0,148,2837	0/0:9,0:9:21.07:0,21,404	0/0:18,0:18:51.16:0,51,938	0/0:27,0:27:78.27:0,78,1487	1/1:2,13:14:36.12:542,36,0	0/1:20,2:22:25.66:26,0,1060	0/0:26,0:26:75.26:0,75,1438	0/0:12,0:12:36.12:0,36,681
chr10	74378885	.	CA	C	4697.73	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.526;DP=569;FS=2.271;HRun=1;HaplotypeScore=60.5335;InbreedingCoeff=0.9999;MQ=87.13;MQ0=0;MQRankSum=-1.105;QD=35.59;ReadPosRankSum=1.050;VQSLOD=4.9338;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:51.17:710,51,0	0/0:11,0:11:33.07:0,33,468	0/0:25,0:25:62.75:0,63,748	0/0:22,0:22:51.71:0,52,635	0/0:22,0:22:63.17:0,63,897	0/0:19,0:19:54.18:0,54,806	0/0:14,0:14:42.13:0,42,607	1/1:0,32:32:90.28:1217,90,0	0/0:21,0:21:63.20:0,63,919	1/1:0,14:14:42.12:554,42,0	1/1:0,24:24:57.19:794,57,0	0/0:13,0:13:39.12:0,39,559	0/0:28,0:28:81.26:0,81,1181	0/0:21,0:21:63.18:0,63,897	0/0:26,0:26:78.25:0,78,1147	0/0:16,0:16:48.16:0,48,718	0/0:21,0:21:63.15:0,63,874	1/1:0,18:18:42.14:586,42,0	0/0:16,0:16:48.14:0,48,696	0/0:16,0:16:45.15:0,45,673	0/0:23,0:23:69.17:0,69,1002	0/0:16,0:16:48.16:0,48,708	0/0:20,0:20:57.60:0,58,780	0/0:14,0:14:42.10:0,42,565	1/1:0,20:20:60.20:837,60,0	0/0:28,0:28:84.23:0,84,1215	0/0:25,0:25:75.20:0,75,1059	0/0:20,0:20:60.20:0,60,890
chr10	74379765	.	A	AACCACC	12231.98	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-9.008;DP=677;FS=3.759;HRun=0;HaplotypeScore=129.0596;InbreedingCoeff=0.9983;MQ=76.17;MQ0=0;MQRankSum=-15.277;QD=77.91;ReadPosRankSum=-3.087;VQSLOD=4.8463;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:26:54.18:1708,54,0	0/0:6,0:6:18.06:0,18,425	0/0:20,0:20:45.15:0,45,1003	0/0:13,0:13:33.11:0,33,766	0/0:45,0:45:99:0,126,2874	0/0:17,0:17:51.18:0,51,1223	0/0:16,0:16:45.15:0,45,1057	1/1:16,23:43:99:3604,120,0	0/0:21,0:21:60.09:0,60,1149	1/1:3,16:23:66.19:2156,66,0	1/1:5,11:19:36.12:1263,36,0	0/0:23,0:23:63.19:0,63,1419	0/0:21,0:21:60.19:0,60,1342	0/0:29,0:29:84.29:0,84,2000	0/0:20,0:20:54.19:0,54,1278	0/0:30,0:30:87.30:0,87,2071	0/0:24,0:24:69.24:0,69,1632	1/1:5,14:19:48.16:1612,48,0	0/0:21,0:21:51.11:0,51,1125	0/0:31,0:31:90.31:0,90,2157	0/0:29,0:29:81.28:0,81,1939	0/0:22,0:22:60.21:0,60,1442	0/0:29,0:29:81.25:0,81,1853	0/0:25,0:25:72.23:0,72,1645	1/1:6,21:27:57.15:1889,57,0	0/0:29,0:29:81.27:0,81,1852	0/0:30,0:30:90.31:0,90,2108	0/0:19,0:19:51.17:0,51,1198
chr10	74380252	.	C	CA	562.72	PASS	AB=0.950;AC=27;AF=0.482;AN=56;BaseQRankSum=1.391;DP=407;FS=19.210;HRun=0;HaplotypeScore=93.8326;InbreedingCoeff=0.0244;MQ=78.38;MQ0=10;MQRankSum=-3.446;QD=1.96;ReadPosRankSum=-0.843;VQSLOD=0.9398;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:3.23:38,3,0	0/0:5,1:6:1.26:0,1,13	0/1:53,0:19:42.32:42,0,133	0/0:46,0:20:9.27:0,9,121	0/1:16,2:19:32.93:33,0,36	0/0:11,0:11:4.62:0,5,19	0/1:10,1:10:6.33:34,0,6	1/1:11,0:11:8.37:53,8,0	1/1:10,3:13:17.56:110,18,0	1/1:13,0:13:12.03:46,12,0	1/1:17,0:17:7.78:79,8,0	0/1:10,1:11:2.01:50,0,2	0/1:14,0:13:13.07:21,0,13	0/0:11,0:11:2.22:0,2,41	0/0:11,1:12:5.62:0,6,50	0/1:6,2:8:11.17:11,0,17	0/1:11,1:12:25.76:27,0,26	0/0:11,0:10:2.75:0,3,11	0/1:2,0:2:2.10:2,0,9	0/1:16,1:17:17.16:17,0,87	0/0:1,0:1:0.47:0,0,1	0/1:7,0:6:6.86:7,0,8	1/1:16,0:16:11.52:62,12,0	0/1:10,0:10:0.72:1,0,5	1/1:8,0:8:6.73:36,7,0	0/1:11,0:11:3.11:8,0,3	0/1:18,1:18:25.34:41,0,25	0/0:22,0:22:10.64:0,11,107
chr10	74380269	.	A	AAAAAG	1390.71	PASS	AB=0.993;AC=17;AF=0.315;AN=54;BaseQRankSum=2.764;DP=568;FS=2.831;HRun=0;HaplotypeScore=137.1985;InbreedingCoeff=0.1892;MQ=68.90;MQ0=16;MQRankSum=-3.266;QD=5.09;ReadPosRankSum=-0.356;VQSLOD=2.5146;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:20:3.79:212,4,0	0/0:8,0:8:7.87:0,8,129	0/0:68,0:20:15.84:0,16,128	0/1:73,0:29:9.41:9,0,157	0/0:18,0:18:20.91:0,21,323	0/0:14,0:14:24.14:0,24,191	0/0:16,0:15:5.05:0,5,223	0/1:24,0:22:12.85:88,0,13	0/0:23,0:23:26.57:0,27,275	1/1:6,13:21:35.51:561,36,0	1/1:20,0:20:29.81:327,30,0	0/1:10,0:10:10.73:11,0,115	0/1:19,0:18:4.37:4,0,104	0/0:13,0:13:16.16:0,16,316	0/0:19,0:19:48.29:0,48,453	0/0:20,0:20:47.39:0,47,443	0/0:19,0:19:48.76:0,49,470	0/1:16,0:14:31.01:126,0,31	0/0:7,0:7:12.34:0,12,163	0/0:23,0:23:56.18:0,56,554	./.	0/1:7,0:6:1.46:1,0,101	0/1:21,0:21:48.87:49,0,84	0/1:16,0:16:3.64:4,0,132	1/1:4,0:9:3.35:137,3,0	0/1:15,0:16:22.83:23,0,252	0/0:28,0:27:30.39:0,30,448	0/0:19,0:18:4.92:0,5,295
chr10	74382477	.	T	TA	1996.38	PASS	AB=0.950;AC=13;AF=0.232;AN=56;BaseQRankSum=-0.993;DP=570;FS=9.173;HRun=11;HaplotypeScore=64.6379;InbreedingCoeff=0.8465;MQ=71.57;MQ0=0;MQRankSum=-0.140;QD=12.40;ReadPosRankSum=-2.556;VQSLOD=2.1288;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,25:31:51.10:517,51,0	0/0:13,0:13:20.91:0,21,162	0/1:17,0:15:15.73:16,0,65	0/0:10,0:8:5.31:0,5,32	0/0:26,0:26:59.68:0,60,460	0/0:23,0:23:53.74:0,54,418	0/0:10,0:11:22.95:0,23,168	1/1:9,0:27:44.46:242,44,0	0/0:21,0:21:46.59:0,47,353	1/1:7,21:28:37.73:539,38,0	1/1:4,19:23:53.90:521,54,0	0/0:28,0:28:62.72:0,63,487	0/0:20,0:20:44.82:0,45,348	0/0:15,0:15:11.83:0,12,192	0/0:23,0:23:53.75:0,54,418	0/0:19,0:19:47.80:0,48,372	0/0:26,2:28:7.83:0,8,427	1/1:4,1:18:17.04:86,17,0	0/0:17,0:17:38.81:0,39,300	0/0:26,0:26:56.74:0,57,441	0/0:20,0:22:42.87:0,43,313	0/0:14,0:14:26.82:0,27,205	0/0:14,0:14:27.36:0,27,209	0/0:21,0:21:47.75:0,48,366	1/1:7,8:15:10.20:262,10,0	0/0:29,0:29:56.70:0,57,440	0/0:23,0:23:38.17:0,38,437	0/0:6,0:6:14.93:0,15,116
chr10	74382596	.	TGCGTGTGCGTGTGCGTGTGC	T	3719.34	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.268;DP=588;FS=13.141;HRun=0;HaplotypeScore=313.1503;InbreedingCoeff=0.9162;MQ=71.25;MQ0=1;MQRankSum=-2.241;QD=48.94;ReadPosRankSum=-0.814;VQSLOD=1.3817;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:15:2.97:0,3,20	0/0:6,0:6:18.06:0,18,1112	0/0:28,0:24:45.68:0,46,1421	0/0:29,0:26:46.76:0,47,1402	0/0:18,0:18:54.17:0,54,3545	0/0:23,0:23:60.16:0,60,4246	0/0:23,0:23:57.18:0,57,4074	1/1:1,16:17:48.08:917,48,0	0/0:18,0:18:54.18:0,54,3032	1/1:0,20:25:53.95:1282,54,0	1/1:0,7:8:3.01:120,3,0	0/0:28,0:28:71.49:0,71,3767	0/0:24,0:24:69.21:0,69,3108	0/0:29,0:29:84.27:0,84,5569	0/0:32,0:32:96.30:0,96,6212	0/0:16,0:16:48.15:0,48,3740	0/0:35,0:35:99:0,99,6479	1/1:14,0:14:31.61:490,32,0	0/0:19,0:19:57.13:0,57,2495	0/0:21,0:21:60.12:0,60,3846	0/0:36,0:36:91.80:0,92,5546	0/0:9,0:9:27.08:0,27,1601	0/0:16,0:16:33.50:0,33,1484	0/0:29,0:29:72.66:0,73,4644	1/1:4,0:12:24.08:911,24,0	0/0:32,0:32:96.27:0,96,5653	0/0:14,0:14:41.93:0,42,2727	0/0:12,0:12:36.12:0,36,2462
chr10	74382600	.	TGTGCGTGTGCGTGTGC	T	2860.96	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=10.215;DP=604;FS=13.011;HRun=0;HaplotypeScore=272.6953;InbreedingCoeff=0.7925;MQ=68.42;MQ0=1;MQRankSum=-2.570;QD=31.10;ReadPosRankSum=0.643;VQSLOD=1.2449;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:1.76:12,2,0	0/0:7,0:7:21.07:0,21,1013	0/0:28,0:23:35.59:0,36,872	0/0:29,0:24:30.54:0,31,900	0/0:20,0:20:57.08:0,57,3050	0/0:24,0:24:60.13:0,60,3402	0/0:22,0:22:54.17:0,54,3149	1/1:16,0:16:36.09:587,36,0	0/0:19,0:19:55.30:0,55,2263	1/1:21,4:25:42.59:1048,43,0	1/1:7,1:8:3.01:121,3,0	0/0:25,0:25:64.96:0,65,2753	0/0:27,0:26:71.70:0,72,2415	0/0:29,0:29:84.23:0,84,4449	0/0:34,0:34:96.21:0,96,4978	0/0:16,0:16:45.15:0,45,2889	0/0:36,0:36:99:0,105,5112	0/1:12,0:12:46.98:363,0,47	0/0:21,0:21:60.12:0,60,2187	0/0:17,0:17:48.15:0,48,2925	0/0:39,0:39:99:0,101,4620	0/0:12,0:12:33.09:0,33,1457	0/0:17,0:17:32.81:0,33,1197	0/0:29,0:29:69.11:0,69,3547	1/1:4,8:12:24.08:891,24,0	0/0:31,0:31:90.29:0,90,4360	0/0:18,0:18:51.16:0,51,2553	0/0:12,0:12:36.07:0,36,1899
chr10	74382608	.	TGC	T	398.42	PASS	AB=0.982;AC=8;AF=0.143;AN=56;BaseQRankSum=11.176;DP=622;FS=0.000;HRun=0;HaplotypeScore=124.8394;InbreedingCoeff=0.4104;MQ=57.51;MQ0=3;MQRankSum=-3.953;QD=3.41;ReadPosRankSum=1.371;VQSLOD=2.5853;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:25:8.94:69,9,0	0/0:8,0:8:23.97:0,24,416	0/0:22,0:15:41.71:0,42,564	0/0:23,0:15:31.42:0,31,573	0/0:20,0:20:57.18:0,57,994	0/0:21,0:21:54.15:0,54,926	0/0:26,0:26:62.62:0,63,1054	1/1:17,0:17:21.62:167,22,0	0/0:20,0:20:32.05:0,32,505	0/1:32,0:32:45.59:125,0,46	0/1:14,0:14:3.12:3,0,46	0/0:24,1:25:32.82:0,33,708	0/0:24,1:24:33.68:0,34,623	0/0:28,0:28:51.17:0,51,1301	0/0:34,0:34:99:0,99,1641	0/0:18,0:18:31.18:0,31,836	0/0:36,0:36:94.70:0,95,1633	0/1:12,1:13:13.28:93,0,13	0/0:20,0:20:60.09:0,60,960	0/0:17,0:17:51.13:0,51,897	0/0:42,0:41:99:0,100,1662	0/0:12,0:12:26.53:0,27,298	0/0:18,0:18:19.78:0,20,347	0/0:29,0:29:12.57:0,13,756	0/1:15,0:15:13.54:79,0,14	0/0:30,0:30:87.09:0,87,1476	0/0:20,0:20:56.68:0,57,945	0/0:10,1:11:4.79:0,5,520
chr10	74382614	.	TGC	T	1719.50	PASS	AB=0.948;AC=16;AF=0.286;AN=56;BaseQRankSum=7.990;DP=651;FS=0.389;HRun=0;HaplotypeScore=124.0738;InbreedingCoeff=0.0499;MQ=54.77;MQ0=4;MQRankSum=-1.881;QD=5.81;ReadPosRankSum=-0.224;VQSLOD=3.2542;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:29:11.93:95,12,0	0/0:8,0:8:23.97:0,24,341	0/0:16,0:9:19.55:0,20,137	0/1:26,0:15:6.27:6,0,225	0/0:20,0:20:53.33:0,53,868	0/0:22,0:22:36.82:0,37,795	0/0:27,0:27:52.90:0,53,866	1/1:21,0:21:18.46:113,18,0	0/1:17,2:19:95.56:250,0,96	0/1:35,0:34:35.65:229,0,36	0/1:17,0:17:14.34:14,0,29	0/1:25,1:26:99:216,0,139	0/1:23,2:24:99:192,0,101	0/0:30,0:30:34.09:0,34,967	0/0:36,0:36:56.18:0,56,1372	0/0:20,0:20:25.87:0,26,725	0/0:36,0:36:54.03:0,54,1172	0/1:14,1:15:14.96:73,0,15	0/0:17,0:17:32.12:0,32,543	0/0:16,0:16:48.01:0,48,685	0/0:45,0:44:58.94:0,59,1173	0/1:10,2:12:70.74:115,0,71	0/1:20,1:21:90.05:126,0,90	0/1:27,2:29:99:254,0,185	1/1:19,1:20:0.28:199,0,0	0/0:27,0:27:68.35:0,68,992	0/0:24,0:24:68.98:0,69,874	0/0:11,0:11:1.69:0,2,373
chr10	74382761	.	GT	G	5444.77	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=16.674;DP=723;FS=13.292;HRun=2;HaplotypeScore=82.0079;InbreedingCoeff=0.9994;MQ=88.90;MQ0=0;MQRankSum=-2.237;QD=33.82;ReadPosRankSum=-4.091;VQSLOD=2.3584;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:90.29:1155,90,0	0/0:13,0:13:39.13:0,39,584	0/0:32,0:32:87.29:0,87,1280	0/0:23,0:23:60.19:0,60,849	0/0:34,0:34:99:0,102,1526	0/0:30,0:30:90.28:0,90,1310	0/0:28,0:28:84.28:0,84,1257	1/1:1,20:21:60.20:779,60,0	0/0:30,0:30:90.29:0,90,1327	1/1:0,33:33:96.26:1197,96,0	1/1:0,24:24:63.20:807,63,0	0/0:27,0:27:81.27:0,81,1211	0/0:23,0:22:63.21:0,63,940	0/0:26,0:26:75.23:0,75,1081	0/0:47,0:47:99:0,141,2092	0/0:27,0:27:81.27:0,81,1213	0/0:34,0:34:99:0,102,1504	1/1:0,20:20:57.18:738,57,0	0/0:9,0:9:24.08:0,24,360	0/0:30,0:30:90.30:0,90,1342	0/0:27,0:27:81.26:0,81,1191	0/0:16,0:16:48.15:0,48,700	0/0:29,0:29:87.25:0,87,1271	0/0:21,0:21:63.20:0,63,924	1/1:0,25:25:60.19:769,60,0	0/0:24,0:24:72.24:0,72,1079	0/0:23,0:23:69.23:0,69,1031	0/0:9,0:9:27.09:0,27,405
chr10	74384462	.	TA	T	9130.46	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=13.700;DP=593;FS=0.306;HRun=2;HaplotypeScore=60.9597;InbreedingCoeff=0.9995;MQ=74.62;MQ0=0;MQRankSum=-0.070;QD=34.59;ReadPosRankSum=1.684;VQSLOD=5.1805;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:60.18:761,60,0	0/0:9,0:9:27.08:0,27,370	0/0:10,0:10:30.08:0,30,399	0/0:14,0:14:39.02:0,39,472	0/0:36,0:36:99:0,102,1448	0/0:25,0:25:72.22:0,72,987	0/0:11,0:11:30.10:0,30,431	1/1:1,26:27:75.18:893,75,0	1/1:2,26:28:84.20:1043,84,0	1/1:0,26:26:78.21:958,78,0	1/1:0,16:16:47.96:559,48,0	1/1:2,18:20:57.18:726,57,0	1/1:4,27:31:84.18:1025,84,0	0/0:26,0:26:75.22:0,75,1026	0/0:15,0:15:42.13:0,42,585	0/0:21,0:21:63.18:0,63,884	0/0:25,0:25:75.22:0,75,1053	1/1:0,21:21:51.17:659,51,0	0/0:20,0:20:60.18:0,60,824	0/0:27,0:27:78.22:0,78,1067	0/0:10,0:10:27.08:0,27,370	1/1:2,18:20:57.09:688,57,0	1/1:6,17:23:66.09:766,66,0	1/1:1,11:12:30.04:353,30,0	1/1:1,19:20:54.18:699,54,0	0/0:22,0:22:63.01:0,63,799	0/0:29,0:29:87.28:0,87,1233	0/0:29,0:29:87.23:0,87,1189
chr10	74384533	.	AT	A	3166.72	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=11.471;DP=590;FS=0.000;HRun=10;HaplotypeScore=68.5239;InbreedingCoeff=0.8931;MQ=66.22;MQ0=2;MQRankSum=-2.242;QD=19.19;ReadPosRankSum=-0.333;VQSLOD=4.2199;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,23:30:59.94:518,60,0	0/0:10,0:10:27.07:0,27,297	0/0:19,0:15:23.46:0,23,222	0/1:8,0:7:8.74:9,0,87	0/0:28,0:28:78.21:0,78,862	0/0:20,0:20:48.12:0,48,524	0/0:15,0:15:42.11:0,42,462	0/0:29,1:30:49.13:0,49,761	1/1:3,23:26:62.97:546,63,0	0/0:30,0:31:78.04:0,78,842	0/0:13,0:13:36.06:0,36,385	1/1:4,15:19:50.98:443,51,0	1/1:3,16:19:53.97:465,54,0	0/0:21,0:21:51.14:0,51,563	0/0:20,0:20:57.15:0,57,630	0/0:21,0:21:51.14:0,51,564	0/0:25,0:25:51.14:0,51,564	0/0:12,0:12:21.06:0,21,232	0/0:14,1:15:4.02:0,4,273	0/0:26,0:26:63.17:0,63,697	0/0:16,0:15:42.11:0,42,465	1/1:2,19:21:59.98:520,60,0	1/1:2,21:23:62.58:546,63,0	1/1:3,13:17:38.02:319,38,0	0/0:11,0:11:30.08:0,30,332	0/0:35,0:35:76.21:0,76,1054	0/0:21,3:23:28.07:0,28,528	0/0:32,0:33:95.94:0,96,1007
chr10	74385067	.	C	CGGGCTCA	24317.95	PASS	AB=0.700;AC=23;AF=0.411;AN=56;BaseQRankSum=-13.034;DP=673;FS=0.991;HRun=0;HaplotypeScore=140.7575;InbreedingCoeff=0.9591;MQ=76.59;MQ0=0;MQRankSum=-18.636;QD=85.63;ReadPosRankSum=-1.233;VQSLOD=5.4039;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:23:36.12:1447,36,0	0/0:10,0:10:30.09:0,30,738	0/0:20,0:20:60.20:0,60,1366	0/0:17,0:17:48.16:0,48,1056	0/0:35,0:35:96.32:0,96,2457	0/0:34,0:34:99:0,102,2594	0/0:17,0:17:51.18:0,51,1343	1/1:6,18:29:81.19:2580,81,0	1/1:6,18:24:60.21:2369,60,0	1/1:5,24:31:85.53:3149,86,0	1/1:5,22:30:69.24:2771,69,0	1/1:5,16:22:48.16:1917,48,0	1/1:6,19:26:60.21:2270,60,0	0/0:23,0:23:63.20:0,63,1607	0/0:34,0:34:99:0,99,2452	0/0:19,0:19:57.13:0,57,1306	0/0:20,0:20:51.17:0,51,1304	0/1:4,2:7:0.85:468,0,1	0/0:14,0:14:39.13:0,39,959	0/0:31,0:31:87.30:0,87,2262	0/0:33,0:33:96.80:0,97,2375	1/1:3,14:20:33.11:1326,33,0	1/1:6,15:24:39.13:1561,39,0	1/1:5,10:15:30.10:1204,30,0	1/1:6,25:32:81.28:3257,81,0	0/0:35,0:35:23.59:0,24,2335	0/0:37,0:36:99:0,105,2493	0/0:10,0:10:30.10:0,30,791
chr10	74385167	.	TAAA	T	3018.14	PASS	AB=0.577;AC=15;AF=0.268;AN=56;BaseQRankSum=3.873;DP=591;FS=3.113;HRun=15;HaplotypeScore=102.3406;InbreedingCoeff=0.6903;MQ=70.23;MQ0=1;MQRankSum=-3.023;QD=15.40;ReadPosRankSum=3.278;VQSLOD=2.8473;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,26:34:51.07:598,51,0	0/0:4,0:4:12.04:0,12,218	0/0:18,0:15:20.29:0,20,292	0/0:17,0:13:14.58:0,15,176	0/0:32,0:35:96.26:0,96,1511	0/0:23,0:25:54.09:0,54,804	0/0:9,0:13:33.11:0,33,540	1/1:9,21:33:56.11:595,56,0	0/1:6,1:13:18.43:23,0,18	1/1:7,17:28:52.19:545,52,0	1/1:4,16:21:44.91:488,45,0	0/0:5,0:12:9.22:0,9,38	0/0:12,1:27:2.83:0,3,119	0/0:23,0:24:63.15:0,63,887	0/0:20,0:27:63.18:0,63,994	0/0:17,0:17:48.13:0,48,753	0/0:24,0:24:69.08:0,69,1018	1/1:3,8:11:24:269,24,0	0/0:16,0:22:48.04:0,48,609	0/0:27,0:31:81.21:0,81,1253	0/0:6,0:6:15.05:0,15,256	0/1:2,1:13:17.24:17,0,39	0/1:3,2:20:11.25:48,0,11	0/0:6,0:20:18.41:0,18,57	1/1:5,16:21:57.13:627,57,0	0/0:22,0:26:54.11:0,54,779	0/0:25,0:34:78.65:0,79,1128	0/0:11,0:11:33.09:0,33,499
chr10	74385731	.	ATAAC	A	1382.31	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.413;DP=664;FS=2.338;HRun=0;HaplotypeScore=102.2430;InbreedingCoeff=0.9975;MQ=75.94;MQ0=0;MQRankSum=-4.377;QD=37.36;ReadPosRankSum=-3.247;VQSLOD=2.8209;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.20:0,57,1496	0/0:12,0:12:36.12:0,36,919	0/0:17,0:17:44.92:0,45,1008	0/0:17,0:17:48.14:0,48,1127	0/0:42,0:42:99:0,123,3024	0/0:34,0:34:99:0,99,2493	0/0:11,0:11:27.08:0,27,635	1/1:4,23:27:69.12:1056,69,0	0/0:21,0:21:60.19:0,60,1523	0/0:34,0:34:93.27:0,93,2067	0/0:18,0:18:54.17:0,54,1308	0/0:26,0:26:63.22:0,63,1678	0/0:25,0:25:72.25:0,72,1867	0/0:28,0:28:84.25:0,84,2027	0/0:31,0:31:93.32:0,93,2447	0/0:24,0:24:72.21:0,72,1755	0/0:28,0:28:81.25:0,81,1979	1/1:0,10:10:24.08:447,24,0	0/0:20,0:20:54.19:0,54,1397	0/0:31,0:31:90.30:0,90,2337	0/0:9,0:9:27.08:0,27,650	0/0:23,0:23:66.23:0,66,1697	0/0:35,0:35:96.27:0,96,2293	0/0:19,0:19:51.18:0,51,1329	0/0:20,0:20:51.15:0,51,1273	0/0:33,0:33:96.30:0,96,2324	0/0:38,0:37:99:0,108,2780	0/0:10,0:10:30.07:0,30,686
chr10	74388030	.	ACGCG	A	1772.54	PASS	AB=0.974;AC=9;AF=0.161;AN=56;BaseQRankSum=3.389;DP=569;FS=35.544;HRun=0;HaplotypeScore=107.6831;InbreedingCoeff=0.5117;MQ=71.74;MQ0=13;MQRankSum=-0.521;QD=14.18;ReadPosRankSum=1.121;VQSLOD=1.4636;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:59.33:840,59,0	0/0:9,0:9:18.02:0,18,311	0/1:22,1:21:50.48:50,0,241	0/0:15,0:10:14.25:0,14,177	0/0:13,0:13:24.08:0,24,459	0/0:13,0:13:30.02:0,30,541	0/0:29,0:30:68.89:0,69,1052	1/1:6,14:20:42.13:627,42,0	0/0:16,0:16:1.99:0,2,148	0/0:23,0:22:47.80:0,48,628	0/1:16,0:16:23.80:24,0,243	0/0:29,0:28:6.12:0,6,201	0/0:12,0:11:5.09:0,5,192	0/0:27,0:27:63.21:0,63,1258	0/0:22,0:21:37.35:0,37,747	0/0:21,0:20:41.97:0,42,756	0/0:18,0:17:45.15:0,45,797	1/1:19,0:19:14.84:376,15,0	0/0:14,0:14:39.12:0,39,563	0/0:14,0:14:30.05:0,30,465	0/0:45,0:43:90.74:0,91,1512	0/0:15,0:13:3.58:0,4,107	0/1:10,0:10:8.81:9,0,10	0/0:36,0:36:15.33:0,15,284	0/0:20,0:20:33.08:0,33,511	0/0:15,0:15:36.10:0,36,596	0/0:22,0:22:60.48:0,60,1161	0/0:15,0:13:23.91:0,24,531
chr10	74388034	.	G	GCA	194.73	PASS	AB=0.970;AC=8;AF=0.143;AN=56;BaseQRankSum=7.186;DP=559;FS=6.566;HRun=0;HaplotypeScore=97.9697;InbreedingCoeff=0.3232;MQ=64.44;MQ0=13;MQRankSum=-1.473;QD=1.30;ReadPosRankSum=-1.803;VQSLOD=1.1503;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:8.95:125,9,0	0/0:8,0:8:17.86:0,18,239	0/0:16,0:13:9.63:0,10,281	0/0:14,0:9:20.06:0,20,215	0/0:15,0:15:27.07:0,27,357	0/0:14,0:14:30.02:0,30,391	0/0:29,0:28:68.94:0,69,861	1/1:19,0:18:2.55:61,3,0	0/0:16,0:16:19.81:0,20,189	0/0:21,0:20:41.56:0,42,563	0/0:14,0:14:18.47:0,18,206	0/1:29,1:29:63.92:64,0,232	0/0:12,0:11:20.86:0,21,222	0/0:29,0:29:66.16:0,66,918	0/0:19,0:18:42.57:0,43,579	0/0:20,0:19:41.25:0,41,541	0/0:21,0:20:46.33:0,46,617	0/1:19,0:21:30:45,0,30	0/0:16,0:16:41.05:0,41,517	0/0:13,0:13:33.04:0,33,416	0/0:46,0:44:93.19:0,93,1235	0/1:15,0:13:3.76:4,0,165	0/0:7,2:11:17.98:0,18,173	0/1:33,0:33:25.65:26,0,381	0/0:20,0:20:20.94:0,21,362	0/0:17,0:17:38.96:0,39,518	0/0:24,0:24:65.90:0,66,844	0/0:14,0:12:36.12:0,36,493
chr10	74388036	.	G	GCACA	1285.64	PASS	AB=0.952;AC=15;AF=0.268;AN=56;BaseQRankSum=6.885;DP=554;FS=2.017;HRun=0;HaplotypeScore=112.4887;InbreedingCoeff=0.5651;MQ=62.49;MQ0=14;MQRankSum=0.528;QD=6.33;ReadPosRankSum=-0.684;VQSLOD=2.5691;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:15.85:122,16,0	0/0:7,0:7:15.05:0,15,272	0/0:15,0:12:0.90:0,1,187	0/0:13,0:8:14.04:0,14,134	0/0:13,0:13:29.99:0,30,443	0/0:13,0:13:24.08:0,24,416	0/0:32,0:31:61.78:0,62,933	1/1:19,0:18:5.85:62,6,0	0/1:16,0:16:29.16:31,0,29	0/0:19,0:18:34.17:0,34,545	0/1:12,0:12:4.33:4,0,142	1/1:14,13:30:12.15:319,12,0	0/1:10,1:10:59.95:85,0,60	0/0:29,0:29:66.18:0,66,1113	0/0:17,0:16:39.12:0,39,668	0/0:19,0:18:42.11:0,42,694	0/0:23,0:22:51.09:0,51,759	0/1:21,0:21:1.63:146,0,2	0/0:17,0:17:44.96:0,45,558	0/0:13,0:13:30:0,30,492	0/0:46,0:44:87.18:0,87,1410	0/1:13,0:14:0.65:102,0,1	1/1:11,0:11:7.97:52,8,0	1/1:16,16:34:23.31:536,23,0	0/0:19,0:19:12.13:0,12,379	0/0:17,0:17:11.70:0,12,524	0/0:25,0:25:72.16:0,72,1178	0/0:14,0:12:29.21:0,29,478
chr10	74388038	.	GCA	G	208.29	PASS	AB=0.875;AC=13;AF=0.250;AN=52;BaseQRankSum=0.856;DP=587;FS=0.770;HRun=0;HaplotypeScore=101.2231;InbreedingCoeff=-0.2426;MQ=56.32;MQ0=18;MQRankSum=0.343;QD=0.83;ReadPosRankSum=2.342;VQSLOD=1.2894;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:2.79:0,3,43	0/0:8,0:8:12:0,12,158	./.	./.	0/1:10,2:12:11.87:12,0,202	0/1:8,4:12:14:14,0,186	0/1:27,5:31:22.78:23,0,182	0/0:30,0:28:25.93:0,26,150	0/0:8,0:18:6.01:0,6,71	0/0:13,0:22:9.14:0,9,63	1/1:12,0:12:3.40:21,3,0	0/0:33,0:31:20.66:0,21,164	0/0:7,0:10:11.62:0,12,123	0/0:26,5:31:11.75:0,12,481	0/1:16,0:15:33.32:33,0,239	0/1:14,6:19:66.40:66,0,281	0/1:18,6:23:37.63:38,0,214	0/0:24,0:24:23.86:0,24,151	0/1:18,0:18:26.15:26,0,84	0/1:11,3:13:18.14:18,0,144	0/1:36,13:47:57.51:58,0,376	0/0:19,0:17:15.42:0,15,140	0/0:13,0:13:6.46:0,6,49	0/0:34,0:33:1.21:0,1,185	0/0:9,0:19:8.64:0,9,55	0/1:16,0:16:18.20:18,0,197	0/1:25,1:26:24.80:25,0,516	0/0:14,0:12:16.25:0,16,187
chr10	74389833	.	TAA	T	925.73	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.529;DP=599;FS=1.350;HRun=11;HaplotypeScore=76.1665;InbreedingCoeff=0.8787;MQ=76.54;MQ0=0;MQRankSum=-0.809;QD=23.74;ReadPosRankSum=-1.027;VQSLOD=3.2785;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:56.68:0,57,830	0/0:7,0:8:23.57:0,24,332	0/0:25,1:21:14.41:0,14,432	0/0:28,0:24:3.77:0,4,506	0/0:19,0:20:50.66:0,51,748	0/0:28,0:28:78.25:0,78,1170	0/0:16,0:16:36.12:0,36,552	1/1:3,18:21:53.25:564,53,0	0/0:18,0:18:44.59:0,45,610	0/0:31,0:31:87.29:0,87,1318	0/0:18,0:20:56.92:0,57,816	0/0:23,0:23:66.22:0,66,1011	0/0:24,0:24:53.67:0,54,794	0/0:17,0:17:39.12:0,39,578	0/0:23,0:23:62.41:0,62,909	0/0:28,0:29:77.75:0,78,1158	0/0:19,0:19:51.17:0,51,777	1/1:0,17:18:22.16:482,22,0	0/0:21,0:21:54.17:0,54,807	0/0:27,0:27:72.24:0,72,1094	0/0:7,0:7:21.07:0,21,320	0/0:19,0:20:56.67:0,57,822	0/0:22,0:23:62.17:0,62,868	0/0:7,0:7:9.90:0,10,118	0/0:30,0:30:83.75:0,84,1200	0/0:35,0:35:99:0,102,1551	0/0:31,0:31:90.29:0,90,1347	0/0:5,0:5:12.04:0,12,185
chr10	74391599	.	A	AG	2527.60	PASS	AB=1.000;AC=19;AF=0.352;AN=54;BaseQRankSum=8.748;DP=406;FS=31.012;HRun=1;HaplotypeScore=68.2494;InbreedingCoeff=0.9266;MQ=55.70;MQ0=11;MQRankSum=-1.659;QD=18.05;ReadPosRankSum=3.234;VQSLOD=2.3356;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:39.19:304,39,0	./.	0/0:19,0:5:6.02:0,6,72	0/0:27,0:15:28.89:0,29,307	0/0:5,0:5:11.98:0,12,110	0/0:14,0:14:29.65:0,30,227	0/0:22,0:21:56.72:0,57,490	1/1:9,0:9:17.87:159,18,0	1/1:1,11:12:35.89:355,36,0	0/0:12,0:13:35.67:0,36,365	0/0:6,0:6:8.99:0,9,82	1/1:7,10:17:47.41:470,47,0	1/1:13,4:17:39.09:291,39,0	0/0:12,0:12:24.40:0,24,200	0/0:16,0:16:41.97:0,42,373	0/0:10,0:10:29.92:0,30,240	0/0:32,0:32:65.17:0,65,549	1/1:9,3:12:26.61:265,27,0	0/0:13,0:11:20.95:0,21,184	0/1:5,0:5:0:0,0,0	0/0:33,0:33:61.92:0,62,498	1/1:5,3:8:16.33:106,16,0	1/1:3,3:6:11.35:81,11,0	1/1:7,20:27:72.98:700,73,0	0/0:6,0:6:11.78:0,12,151	0/0:15,0:15:38.40:0,38,310	0/0:12,0:11:20.94:0,21,189	0/0:9,0:9:23.73:0,24,193
chr10	74391609	.	C	CA	1233.03	PASS	AB=0.843;AC=13;AF=0.250;AN=52;BaseQRankSum=9.748;DP=410;FS=24.286;HRun=0;HaplotypeScore=79.9701;InbreedingCoeff=0.4105;MQ=59.77;MQ0=2;MQRankSum=2.380;QD=8.94;ReadPosRankSum=8.053;VQSLOD=1.5336;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:13.22:111,13,0	./.	0/0:20,0:14:23.54:0,24,239	0/0:20,0:13:29.62:0,30,329	0/0:6,0:6:11.99:0,12,120	0/0:12,0:12:26.94:0,27,221	0/0:24,0:23:50.82:0,51,461	0/1:7,0:7:18.27:21,0,18	1/1:1,11:12:34.79:266,35,0	0/0:19,0:19:44.77:0,45,403	0/0:7,0:7:11.80:0,12,93	0/1:10,9:19:27.36:218,0,27	0/1:10,4:15:48.65:174,0,49	0/0:15,0:15:24.85:0,25,217	0/0:15,0:15:41.94:0,42,386	0/0:9,0:9:21.01:0,21,186	0/0:34,0:34:66.42:0,66,634	0/1:13,0:13:22.47:22,0,88	0/0:11,0:10:24.38:0,24,207	./.	0/0:36,0:36:58.97:0,59,534	0/1:8,3:11:16.83:94,0,17	1/1:5,2:7:2.51:33,3,0	1/1:6,23:29:35.21:460,35,0	0/0:8,0:8:17.69:0,18,194	0/0:12,0:12:23.21:0,23,190	0/0:12,0:11:14.99:0,15,155	0/0:3,0:3:5.99:0,6,63
chr10	74391611	.	C	CCA	3029.11	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=5.285;DP=411;FS=1.966;HRun=0;HaplotypeScore=106.4694;InbreedingCoeff=0.5377;MQ=60.15;MQ0=2;MQRankSum=0.603;QD=15.69;ReadPosRankSum=3.155;VQSLOD=3.7922;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:27.49:197,27,0	0/0:3,0:3:3:0,3,26	0/0:22,0:15:23.11:0,23,220	0/0:21,0:13:3.02:0,3,39	0/0:7,0:7:5.01:0,5,36	0/0:10,0:10:8.95:0,9,71	0/0:22,0:22:20.93:0,21,176	0/1:8,0:8:5.86:66,0,6	1/1:13,0:13:38.16:534,38,0	1/1:20,0:20:12.19:152,12,0	0/1:5,0:5:21.46:35,0,21	1/1:12,7:20:33.11:485,33,0	1/1:15,0:15:29.92:315,30,0	0/0:14,0:14:5.82:0,6,57	0/0:14,0:14:8.98:0,9,83	0/0:9,0:9:3:0,3,26	0/0:36,0:36:23.60:0,24,230	1/1:14,0:14:11.94:90,12,0	0/1:9,0:8:18.94:20,0,19	0/1:7,0:7:0:0,0,0	0/0:32,0:33:22.12:0,22,263	1/1:9,0:10:18:204,18,0	1/1:5,0:6:9.02:116,9,0	1/1:31,0:31:72.59:971,73,0	0/1:8,0:8:6.33:32,0,6	0/0:11,0:11:8.04:0,8,59	0/0:15,0:14:8.99:0,9,84	0/1:4,0:4:0:0,0,0
chr10	74391622	.	C	CACAT	2130.37	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=8.105;DP=401;FS=12.033;HRun=0;HaplotypeScore=98.4017;InbreedingCoeff=0.3836;MQ=63.08;MQ0=0;MQRankSum=-0.354;QD=11.15;ReadPosRankSum=9.675;VQSLOD=0.7388;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,16:27:24.08:576,24,0	0/0:3,0:3:9:0,9,99	0/0:27,0:20:53.84:0,54,632	0/0:18,0:13:23.77:0,24,197	0/0:10,0:10:23.99:0,24,241	0/0:12,0:12:32.99:0,33,358	0/0:16,0:16:39.04:0,39,504	1/1:3,0:12:26.95:313,27,0	0/1:15,0:15:9.75:117,0,10	1/1:17,0:17:36.01:245,36,0	0/1:7,0:7:11.55:96,0,12	0/1:25,0:25:69.32:96,0,69	0/1:14,0:14:13.97:133,0,14	0/0:10,0:10:23.61:0,24,246	0/0:9,0:9:23.80:0,24,244	0/0:5,0:5:14.99:0,15,152	0/0:32,0:32:74.51:0,75,792	1/1:9,1:10:23.96:358,24,0	0/0:7,0:7:14.97:0,15,157	0/0:9,0:9:17.97:0,18,147	0/0:29,0:29:66.06:0,66,863	0/1:10,0:10:3.86:78,0,4	0/1:9,0:9:27.84:28,0,30	0/1:35,0:35:48.55:218,0,49	0/1:8,0:8:0.15:52,0,0	0/0:11,0:11:27.05:0,27,342	0/0:12,0:12:29.99:0,30,313	0/1:2,0:2:0:0,0,0
chr10	74391832	.	T	TA	1967.74	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-7.164;DP=424;FS=1.055;HRun=10;HaplotypeScore=62.7773;InbreedingCoeff=0.9357;MQ=71.21;MQ0=2;MQRankSum=-0.175;QD=17.89;ReadPosRankSum=0.788;VQSLOD=4.2894;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:74.84:0,75,616	0/0:5,0:5:8.95:0,9,69	0/0:23,0:17:16.66:0,17,140	0/0:27,0:24:18.01:0,18,218	0/0:14,0:14:32.95:0,33,277	0/0:20,0:20:32.90:0,33,271	0/0:8,0:8:20.96:0,21,169	1/1:7,18:25:54.59:563,55,0	1/1:3,9:12:21.05:224,21,0	0/0:16,1:17:6.97:0,7,264	0/0:18,0:18:50.92:0,51,415	1/1:7,15:22:20.26:404,20,0	1/1:6,7:14:21.02:213,21,0	0/0:13,0:13:29.96:0,30,246	0/0:10,0:11:16.98:0,17,129	0/0:10,0:10:26.96:0,27,222	0/0:21,0:22:43.96:0,44,351	1/1:2,13:15:27.07:288,27,0	0/0:11,0:11:11.96:0,12,99	0/0:15,0:15:44.95:0,45,369	0/0:8,0:8:5.98:0,6,49	1/1:1,6:7:15.04:160,15,0	1/1:0,7:6:12.03:128,12,0	1/1:0,8:8:18.05:192,18,0	0/0:14,0:14:23.93:0,24,193	0/0:17,0:17:35.93:0,36,294	0/0:14,0:13:26.94:0,27,221	0/0:13,0:13:32.91:0,33,266
chr10	74398971	.	T	TA	2233.84	PASS	AB=0.904;AC=16;AF=0.286;AN=56;BaseQRankSum=-4.786;DP=398;FS=5.273;HRun=11;HaplotypeScore=53.3146;InbreedingCoeff=0.6979;MQ=86.60;MQ0=6;MQRankSum=-0.522;QD=12.62;ReadPosRankSum=-0.506;VQSLOD=3.0847;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,23:28:17.47:478,17,0	0/0:8,0:9:22.94:0,23,168	0/0:44,0:24:15.34:0,15,148	0/1:39,0:24:3.80:4,0,22	0/0:16,0:16:38.76:0,39,291	0/0:11,0:11:32.87:0,33,254	0/0:11,0:11:11.50:0,12,168	1/1:13,21:33:2.34:543,2,0	0/0:4,0:4:8.96:0,9,70	1/1:4,10:14:9.82:277,10,0	1/1:2,9:11:17.96:161,18,0	0/1:4,1:5:15.49:15,0,78	0/0:4,0:4:11.95:0,12,93	0/0:8,0:8:17.92:0,18,139	0/0:5,0:6:8:0,8,52	1/1:0,6:6:18.04:183,18,0	0/0:27,0:27:62.72:0,63,484	1/1:4,19:24:45.09:457,45,0	0/0:17,0:19:28.89:0,29,215	0/0:8,0:8:17.89:0,18,138	0/0:2,0:2:5.98:0,6,46	0/0:3,0:3:2.98:0,3,23	0/0:1,0:1:2.99:0,3,23	0/0:6,0:6:17.93:0,18,139	1/1:3,10:15:32.74:303,33,0	0/0:11,0:14:33.95:0,34,244	0/0:15,0:15:41.81:0,42,320	0/0:12,0:12:27.34:0,27,210
chr10	74400354	.	CTTT	C	1090.86	PASS	AB=0.658;AC=7;AF=0.125;AN=56;BaseQRankSum=3.329;DP=561;FS=0.000;HRun=16;HaplotypeScore=82.1805;InbreedingCoeff=0.7330;MQ=64.79;MQ0=12;MQRankSum=0.357;QD=11.86;ReadPosRankSum=4.993;VQSLOD=0.6644;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:15:25.37:0,25,193	0/0:3,0:3:3.01:0,3,53	0/0:38,0:19:19.91:0,20,189	0/0:22,0:14:8.70:0,9,74	0/0:33,0:38:98.20:0,98,1350	0/0:18,0:22:56.08:0,56,722	0/0:14,0:18:34.31:0,34,484	0/0:22,0:28:33.53:0,34,313	0/0:15,0:15:21.07:0,21,290	1/1:10,18:29:44.54:461,45,0	1/1:4,13:17:23.62:258,24,0	0/0:14,0:14:11.06:0,11,118	0/0:16,0:15:17.38:0,17,201	0/0:17,0:18:39.04:0,39,563	0/0:24,0:26:72.14:0,72,1005	1/1:6,13:21:15.52:305,16,0	0/0:14,0:16:38.45:0,38,551	0/0:8,0:17:34.16:0,34,311	0/0:20,0:21:42.20:0,42,590	0/0:20,0:21:51.06:0,51,694	0/0:10,0:9:12.03:0,12,182	0/0:17,0:17:28.98:0,29,316	0/0:13,0:13:11.12:0,11,116	0/0:14,0:14:12.04:0,12,177	0/1:12,12:25:20.24:212,0,20	0/0:19,0:19:48.12:0,48,682	0/0:26,0:28:63.12:0,63,919	0/0:7,0:12:27.03:0,27,371
chr10	74400355	.	T	TC	687.58	PASS	AB=0.563;AC=11;AF=0.196;AN=56;BaseQRankSum=0.651;DP=590;FS=1.250;HRun=1;HaplotypeScore=89.6356;InbreedingCoeff=0.8372;MQ=64.64;MQ0=12;MQRankSum=1.598;QD=6.25;ReadPosRankSum=1.178;VQSLOD=0.5802;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:12.24:0,12,174	0/0:4,0:4:9:0,9,80	0/0:38,0:16:30.58:0,31,294	0/0:23,0:14:17.91:0,18,200	0/0:41,0:40:92.89:0,93,866	0/0:22,0:22:54.30:0,54,457	0/0:16,0:16:35.15:0,35,307	0/0:32,1:29:30.44:0,30,486	1/1:3,13:16:16.73:182,17,0	0/0:29,0:29:52.56:0,53,555	0/0:18,0:18:41.89:0,42,341	1/1:5,16:21:7.08:61,7,0	1/1:6,13:18:16.36:162,16,0	0/0:16,0:16:46.75:0,47,376	0/0:29,0:29:64.80:0,65,577	0/0:21,0:21:50.90:0,51,424	0/0:16,0:16:25.94:0,26,346	0/0:18,0:18:20.64:0,21,234	0/0:22,0:22:43:0,43,474	0/0:20,0:19:48.83:0,49,447	0/0:10,0:9:23.96:0,24,212	1/1:2,15:17:39.57:296,40,0	1/1:7,12:19:15.57:99,16,0	0/1:4,14:18:31.95:60,0,32	0/0:25,0:25:54.86:0,55,470	0/0:23,0:23:48.75:0,49,444	0/0:30,0:30:67.15:0,67,568	0/0:12,0:12:31.04:0,31,236
chr10	74401479	.	CA	C	2065.98	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.879;DP=432;FS=0.000;HRun=11;HaplotypeScore=48.1291;InbreedingCoeff=0.9591;MQ=83.33;MQ0=0;MQRankSum=-0.894;QD=17.51;ReadPosRankSum=-2.787;VQSLOD=3.3775;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:23.97:197,24,0	0/0:6,0:6:18.05:0,18,192	0/0:26,0:21:19.97:0,20,153	0/0:11,0:11:17.44:0,17,151	0/0:38,0:39:99:0,102,1070	0/0:12,0:12:30.08:0,30,320	0/0:6,0:8:17.70:0,18,149	1/1:4,22:27:67.91:542,68,0	0/0:10,0:10:27.07:0,27,288	1/1:3,15:18:44.93:369,45,0	1/1:3,17:20:21.94:386,22,0	0/0:12,0:12:25.31:0,25,259	0/0:10,0:10:27.04:0,27,273	0/0:13,0:13:36.05:0,36,371	0/0:21,0:21:47.72:0,48,532	1/1:1,6:7:11.98:99,12,0	0/0:26,0:26:60.06:0,60,607	1/1:5,18:23:47.93:394,48,0	0/0:21,0:21:42.11:0,42,448	0/0:15,0:15:36.09:0,36,384	0/0:4,0:4:9.01:0,9,89	0/0:5,0:5:9.02:0,9,96	0/0:15,0:15:42.11:0,42,447	0/0:4,0:4:12.03:0,12,128	1/1:2,11:14:34.99:277,35,0	0/0:22,0:22:42.08:0,42,433	0/0:23,0:25:65.87:0,66,668	0/0:9,0:9:18.05:0,18,192
chr10	74403350	.	TTCTCTCTC	T	1234.74	PASS	AB=0.905;AC=10;AF=0.185;AN=54;BaseQRankSum=4.274;DP=537;FS=0.000;HRun=0;HaplotypeScore=163.1979;InbreedingCoeff=0.5729;MQ=67.77;MQ0=13;MQRankSum=-5.300;QD=11.33;ReadPosRankSum=-0.353;VQSLOD=2.3915;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:12.50:0,13,387	0/0:14,0:14:9.01:0,9,266	./.	0/0:30,0:22:0.47:0,0,1	0/0:31,0:32:39.12:0,39,1157	0/0:21,0:21:36.12:0,36,1116	0/0:13,0:13:3.48:0,3,63	0/0:39,0:36:12.03:0,12,79	1/1:7,6:16:32.98:648,33,0	0/1:23,0:23:3.93:4,0,374	0/0:22,0:22:37.39:0,37,850	1/1:11,2:13:2.19:96,2,0	1/1:11,6:18:14.72:404,15,0	0/0:15,0:16:15.05:0,15,548	0/0:16,0:15:30.08:0,30,800	0/0:21,0:21:21.05:0,21,455	0/0:5,0:6:9.03:0,9,234	0/0:9,0:7:9.02:0,9,206	0/0:22,0:19:10.38:0,10,236	0/0:17,0:18:24.04:0,24,559	0/0:19,0:18:12.03:0,12,242	0/0:15,3:18:2.97:0,3,20	0/1:13,2:17:58.08:58,0,90	1/1:14,7:22:9.16:172,9,0	0/0:17,0:16:18.05:0,18,440	0/0:22,0:22:24.06:0,24,617	0/0:12,0:16:27.04:0,27,441	0/0:19,0:19:24.08:0,24,758
chr10	74403393	.	T	TCTTC	1686.05	PASS	AB=0.919;AC=9;AF=0.161;AN=56;BaseQRankSum=0.040;DP=534;FS=1.842;HRun=0;HaplotypeScore=132.3742;InbreedingCoeff=0.3500;MQ=64.07;MQ0=14;MQRankSum=-2.950;QD=13.28;ReadPosRankSum=-1.435;VQSLOD=3.3990;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:17:47.10:70,0,47	0/0:9,0:9:20.94:0,21,326	0/0:31,0:13:9.59:0,10,256	0/0:34,0:11:8.76:0,9,86	0/0:34,0:34:77.70:0,78,1076	0/0:28,0:28:74.98:0,75,1050	0/0:15,0:15:28.91:0,29,402	1/1:19,0:16:39.08:579,39,0	0/0:19,0:20:55.24:0,55,677	0/1:23,0:23:17.29:442,0,17	0/1:21,0:21:99:260,0,123	0/0:11,0:11:21.33:0,21,267	0/0:24,0:23:52.91:0,53,725	0/0:21,0:21:49.97:0,50,731	0/0:16,0:16:33.08:0,33,475	1/1:5,2:16:9.02:177,9,0	0/0:14,0:14:36.04:0,36,458	0/1:5,0:4:29.13:56,0,29	0/0:9,0:9:26.98:0,27,359	0/0:20,0:20:50.68:0,51,709	0/0:12,0:10:18.04:0,18,243	0/0:21,0:21:36.12:0,36,551	0/0:21,0:20:20.64:0,21,253	0/0:15,0:15:7.37:0,7,89	0/1:8,17:24:0.69:249,0,1	0/0:19,0:18:2.77:0,3,617	0/0:20,0:20:47.92:0,48,572	0/0:11,0:11:31.73:0,32,359
chr10	74403414	.	C	CAG	1210.25	PASS	AB=0.905;AC=23;AF=0.442;AN=52;BaseQRankSum=2.958;DP=554;FS=10.487;HRun=0;HaplotypeScore=128.1004;InbreedingCoeff=0.0966;MQ=61.47;MQ0=7;MQRankSum=-2.433;QD=3.22;ReadPosRankSum=-0.678;VQSLOD=1.8091;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:24:4.93:44,5,0	0/0:9,0:10:14.87:0,15,147	./.	0/1:40,0:11:0:0,0,0	0/0:23,0:25:26.90:0,27,280	0/0:24,0:25:0.02:0,0,168	0/1:13,2:16:21.71:22,0,190	0/0:17,0:17:8.71:0,9,99	0/1:21,0:21:32.60:33,0,57	1/1:22,0:25:17.89:145,18,0	1/1:18,0:24:6.66:74,7,0	0/1:11,10:21:51.39:121,0,51	0/1:25,0:25:48.51:125,0,49	0/1:24,0:26:9.22:9,0,236	0/1:6,5:13:62.31:118,0,62	1/1:17,0:19:17.19:151,17,0	0/1:21,0:21:3.33:3,0,350	0/0:4,0:5:11.85:0,12,103	0/0:14,0:15:14.68:0,15,128	0/0:20,0:21:23.87:0,24,237	./.	0/1:18,1:19:48.50:141,0,49	0/1:12,6:18:24.26:82,0,24	1/1:11,1:19:8.93:98,9,0	1/1:24,0:25:18.01:189,18,0	0/1:15,0:18:21.74:22,0,139	0/0:18,0:18:14.54:0,15,147	0/0:7,0:7:3.01:0,3,33
chr10	74404616	.	C	CATATAT	5687.38	PASS	AB=0.645;AC=17;AF=0.304;AN=56;BaseQRankSum=3.212;DP=755;FS=9.428;HRun=0;HaplotypeScore=192.8740;InbreedingCoeff=0.7165;MQ=54.32;MQ0=1;MQRankSum=-6.320;QD=16.68;ReadPosRankSum=-3.871;VQSLOD=2.3880;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,34:42:15.03:534,15,0	0/0:4,0:4:11.99:0,12,121	0/0:20,0:17:34.34:0,34,401	0/0:20,0:16:6.52:0,7,176	0/0:37,0:37:99:0,111,1699	0/0:23,0:23:69.15:0,69,1362	0/0:18,0:18:45.07:0,45,686	1/1:53,0:53:99:1799,156,0	0/1:20,0:38:99:206,0,158	1/1:35,0:34:93.08:1173,93,0	1/1:35,0:35:56.37:527,56,0	0/1:18,0:34:99:126,0,292	0/1:5,0:19:55.94:158,0,56	0/0:33,0:33:93.13:0,93,1570	0/0:24,0:24:72.09:0,72,1178	1/1:30,0:30:29.99:285,30,0	0/0:29,0:29:78.04:0,78,1235	1/1:15,0:15:40.82:372,41,0	0/0:21,0:20:59.30:0,59,812	0/0:35,0:35:99:0,105,1914	0/0:28,0:28:84.13:0,84,1491	0/0:18,0:18:23.95:0,24,193	0/0:21,0:21:10.40:0,10,238	0/0:9,0:9:17.94:0,18,142	1/1:40,0:40:51:508,51,0	0/0:25,0:25:75.12:0,75,1278	0/0:43,0:43:99:0,126,2095	0/0:6,0:6:18.01:0,18,261
chr10	74405098	.	CG	C	1101.09	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=2.046;DP=358;FS=6.968;HRun=3;HaplotypeScore=50.4571;InbreedingCoeff=0.7977;MQ=45.30;MQ0=33;MQRankSum=-3.051;QD=7.10;ReadPosRankSum=1.557;VQSLOD=0.3699;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:21:26.59:174,27,0	0/0:8,0:8:20.19:0,20,130	0/1:25,0:3:0.03:0,0,0	0/0:31,0:5:5.48:0,5,24	0/0:14,0:14:17.16:0,17,120	0/0:8,0:7:13.96:0,14,102	0/0:14,0:14:29.40:0,29,188	1/1:9,0:8:4.98:28,5,0	1/1:4,6:9:2.99:23,3,0	1/1:8,1:8:17.76:133,18,0	1/1:6,1:6:10.68:63,11,0	1/1:12,1:13:27.75:206,28,0	1/1:11,1:12:26.08:175,26,0	0/0:15,0:14:26.64:0,27,230	0/0:11,0:10:10.46:0,10,68	1/1:5,0:5:9.14:52,9,0	0/0:30,0:27:58.07:0,58,504	1/1:6,0:4:8.96:68,9,0	0/0:16,0:14:15.04:0,15,208	0/0:15,0:14:16.57:0,17,113	0/0:8,0:6:5.99:0,6,50	0/1:4,0:3:0:0,0,0	1/1:2,7:9:2.99:24,3,0	1/1:8,1:9:22.25:148,22,0	1/1:8,3:12:25.31:206,25,0	0/0:13,0:13:28.53:0,29,223	0/0:11,0:11:15.34:0,15,152	0/0:7,0:3:4.99:0,5,24
chr10	74405125	.	G	GA	1276.71	PASS	AB=0.921;AC=15;AF=0.268;AN=56;BaseQRankSum=5.397;DP=518;FS=3.237;HRun=11;HaplotypeScore=75.9335;InbreedingCoeff=0.6340;MQ=57.14;MQ0=26;MQRankSum=-1.967;QD=6.14;ReadPosRankSum=0.720;VQSLOD=1.9730;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:23:41.38:274,41,0	0/0:4,0:4:8.96:0,9,70	0/0:55,0:16:10.69:0,11,102	0/1:65,0:14:3.34:3,0,52	0/0:24,0:24:45.28:0,45,344	0/0:9,0:9:20.85:0,21,157	0/0:10,0:10:23.91:0,24,185	0/1:16,5:21:10.01:137,0,10	0/0:11,0:11:20.59:0,21,141	1/1:8,5:15:7.45:199,7,0	1/1:7,11:17:4.94:210,5,0	0/0:18,0:17:18.93:0,19,148	0/0:12,0:12:10.23:0,10,127	0/0:20,0:20:35.83:0,36,264	0/0:12,0:12:22.59:0,23,129	1/1:6,4:10:2.27:147,2,0	0/0:42,0:39:70.37:0,70,534	1/1:8,7:15:22.89:232,23,0	0/0:20,0:19:32.26:0,32,247	0/0:15,0:14:23.68:0,24,184	0/0:6,0:6:16.50:0,16,120	0/0:9,0:9:2.48:0,2,82	0/0:8,0:8:14.94:0,15,116	0/0:13,0:12:23.32:0,23,158	1/1:5,10:15:23.57:241,24,0	0/1:20,1:21:5.06:5,0,230	0/0:13,0:14:18.63:0,19,133	0/0:6,0:6:11.93:0,12,90
chr10	74405131	.	A	AG	514.20	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=5.415;DP=530;FS=15.654;HRun=0;HaplotypeScore=80.5018;InbreedingCoeff=0.1055;MQ=60.17;MQ0=19;MQRankSum=1.638;QD=4.94;ReadPosRankSum=3.069;VQSLOD=2.2597;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,21:26:42.12:568,42,0	0/0:3,0:3:9.03:0,9,125	0/0:51,0:20:41.32:0,41,372	0/0:71,0:13:16.70:0,17,193	0/0:26,0:26:71.91:0,72,822	0/0:10,0:10:27.04:0,27,337	0/0:10,0:10:30.02:0,30,378	0/0:24,0:24:23.23:0,23,267	0/1:14,0:14:20.39:20,0,100	0/0:16,0:16:15.64:0,16,143	0/0:19,0:18:1.85:0,2,118	0/0:17,0:16:25.45:0,25,127	0/1:12,0:12:1.02:1,0,57	0/0:19,0:19:41.98:0,42,534	0/0:13,0:12:29.97:0,30,318	0/1:11,0:11:5.97:6,0,91	0/0:40,0:39:92.97:0,93,1142	0/1:15,0:14:13.36:13,0,93	0/0:22,0:21:57.02:0,57,635	0/0:14,0:14:33:0,33,396	0/0:6,0:6:18.06:0,18,240	0/1:9,0:9:18.19:18,0,25	0/0:8,0:8:5.97:0,6,28	0/0:14,0:13:3.73:0,4,50	0/1:16,0:16:17.96:18,0,63	0/0:23,0:22:57.46:0,57,652	0/0:14,0:14:41.78:0,42,415	0/0:6,0:6:15.01:0,15,186
chr10	74408725	.	GCAA	G	232.42	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.354;DP=437;FS=1.376;HRun=0;HaplotypeScore=71.9436;InbreedingCoeff=0.8950;MQ=79.03;MQ0=1;MQRankSum=-2.296;QD=12.91;ReadPosRankSum=-0.347;VQSLOD=3.2943;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:21.03:325,21,0	0/0:10,0:10:30.09:0,30,659	0/0:33,0:20:41.55:0,42,569	0/0:17,0:8:8.89:0,9,83	0/0:8,0:8:21.07:0,21,265	0/0:27,0:27:78.20:0,78,1545	0/0:16,0:16:48.10:0,48,1069	0/0:20,0:20:57.18:0,57,1118	0/0:12,0:12:36.07:0,36,542	0/0:8,0:8:21.52:0,22,333	0/0:10,0:11:33.07:0,33,597	0/0:11,0:11:18:0,18,258	0/0:11,0:11:30.09:0,30,574	0/0:14,0:15:45.15:0,45,851	0/0:18,0:18:54.17:0,54,1168	0/0:14,0:14:39.10:0,39,681	0/0:24,0:23:72.20:0,72,1408	0/0:13,0:13:33.08:0,33,712	0/0:18,0:18:51.04:0,51,846	0/0:20,0:20:57.15:0,57,1177	0/0:14,0:14:42.10:0,42,809	0/0:13,0:13:36.02:0,36,531	0/0:17,0:17:42.40:0,42,572	0/0:12,0:12:21.47:0,21,318	0/0:13,0:13:36.05:0,36,568	0/0:13,0:14:42.08:0,42,792	0/0:25,0:26:78.11:0,78,1378	0/0:4,0:4:12.04:0,12,277
chr10	74408726	.	C	CAA	1664.04	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=4.647;DP=484;FS=6.571;HRun=13;HaplotypeScore=99.4138;InbreedingCoeff=0.6699;MQ=77.64;MQ0=1;MQRankSum=-2.130;QD=10.27;ReadPosRankSum=-5.974;VQSLOD=0.7629;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:15.68:0,16,69	0/0:10,0:10:26.97:0,27,231	0/0:35,0:22:9.93:0,10,119	0/0:21,0:9:2.54:0,3,10	0/0:1,0:9:16.39:0,16,71	0/0:27,0:29:44.28:0,44,420	0/0:16,0:17:47.42:0,47,393	0/0:21,0:21:31.70:0,32,261	1/1:13,2:15:38.52:414,39,0	0/1:8,0:8:20.22:37,0,20	1/1:13,0:13:22.21:115,22,0	1/1:14,0:15:22.95:183,23,0	1/1:11,2:14:0.60:227,1,0	0/0:17,0:17:8.10:0,8,130	0/0:19,0:19:31.29:0,31,325	1/1:17,0:18:5.52:176,6,0	0/0:25,0:24:21.82:0,22,341	0/1:15,0:15:1.37:1,0,137	0/0:16,0:16:27.31:0,27,264	0/0:19,0:19:38.83:0,39,339	0/0:15,0:15:26.80:0,27,228	1/1:13,1:15:1.02:178,1,0	1/1:7,9:18:2.86:189,3,0	1/1:13,1:14:15.47:185,15,0	1/1:14,0:17:24.99:145,25,0	0/0:15,0:16:8.26:0,8,214	0/0:28,0:28:46.81:0,47,384	0/0:4,0:4:2.90:0,3,70
chr10	74409819	.	AAGATC	A	8582.24	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.830;DP=593;FS=1.631;HRun=0;HaplotypeScore=110.7654;InbreedingCoeff=0.9991;MQ=80.26;MQ0=0;MQRankSum=-6.773;QD=58.78;ReadPosRankSum=-0.658;VQSLOD=5.3142;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:48.16:1070,48,0	0/0:7,0:7:21.07:0,21,665	0/0:25,0:25:69.24:0,69,2068	0/0:19,0:19:51.17:0,51,1506	0/0:38,0:38:99:0,114,3518	0/0:22,0:22:63.22:0,63,1947	0/0:11,0:11:33.11:0,33,1067	1/1:2,23:25:69.22:1454,69,0	0/0:16,0:16:45.15:0,45,1454	1/1:1,19:20:57.20:1245,57,0	1/1:0,20:20:60.21:1335,60,0	0/0:26,0:26:78.27:0,78,2456	0/0:29,0:29:87.30:0,87,2584	0/0:12,0:12:36.12:0,36,1163	0/0:24,0:24:72.25:0,72,2326	1/1:0,27:27:72.25:1605,72,0	0/0:23,0:23:69.24:0,69,2204	1/1:0,12:12:30.10:669,30,0	0/0:21,0:21:63.22:0,63,1970	0/0:14,0:14:42.13:0,42,1271	0/0:31,0:31:84.29:0,84,2650	0/0:25,0:25:75.24:0,75,2351	0/0:13,0:13:39.12:0,39,1187	0/0:20,0:20:60.21:0,60,1938	1/1:0,23:23:54.19:1204,54,0	0/0:21,0:21:63.22:0,63,2037	0/0:34,0:34:99:0,102,3207	0/0:16,0:16:48.16:0,48,1551
chr10	74411343	.	C	CATGT	6128.95	PASS	AB=0.819;AC=24;AF=0.462;AN=52;BaseQRankSum=0.922;DP=641;FS=1.464;HRun=0;HaplotypeScore=103.5625;InbreedingCoeff=0.7978;MQ=64.67;MQ0=8;MQRankSum=-3.355;QD=19.58;ReadPosRankSum=-3.883;VQSLOD=3.7088;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:99:441,0,120	0/0:12,0:12:21.04:0,21,285	./.	./.	0/0:27,0:27:32.98:0,33,420	0/0:19,0:19:33.07:0,33,454	0/0:21,0:21:33.05:0,33,407	1/1:42,0:42:41.55:296,42,0	1/1:8,21:29:33.11:785,33,0	1/1:24,0:24:44.86:470,45,0	1/1:19,0:19:6.02:98,6,0	1/1:6,16:23:30.10:713,30,0	1/1:10,15:25:30.10:713,30,0	0/0:16,0:16:36.04:0,36,433	0/0:31,0:31:51.07:0,51,646	1/1:13,0:13:15.05:246,15,0	0/0:30,0:31:48.92:0,49,665	1/1:19,0:19:21.07:392,21,0	0/0:29,0:30:38.95:0,39,476	0/0:24,0:24:51:0,51,592	0/0:21,0:21:45.08:0,45,638	1/1:7,17:24:33.11:770,33,0	1/1:15,6:21:42.01:622,42,0	0/1:10,12:23:29.65:335,0,30	1/1:20,0:20:15.05:248,15,0	0/0:23,0:23:33.06:0,33,398	0/0:34,0:33:68.98:0,69,807	0/0:4,0:4:3.01:0,3,47
chr10	74411362	.	G	GTATGTATA	4519.45	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=2.760;DP=669;FS=8.853;HRun=0;HaplotypeScore=157.4883;InbreedingCoeff=0.2928;MQ=59.38;MQ0=9;MQRankSum=-1.291;QD=13.82;ReadPosRankSum=5.692;VQSLOD=2.2653;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:47.48:0,47,579	0/0:11,0:11:27.06:0,27,596	0/0:17,0:3:2.20:0,2,25	0/1:8,0:3:22.98:23,0,23	0/0:25,0:25:57.07:0,57,1024	0/0:18,0:18:51.06:0,51,989	0/0:20,0:20:51.06:0,51,983	0/1:40,0:40:86.63:405,0,87	0/1:29,0:29:99:113,0,99	1/1:3,30:34:87.13:1836,87,0	1/1:2,16:21:6.02:259,6,0	0/1:22,0:22:36.21:110,0,36	0/1:29,0:29:92.62:93,0,157	0/0:19,0:19:45.10:0,45,951	0/0:32,0:32:87.13:0,87,1577	1/1:3,17:22:15.05:646,15,0	0/0:29,0:29:81.15:0,81,1581	1/1:3,0:24:21.05:220,21,0	0/0:22,0:21:55.38:0,55,1155	0/0:22,0:22:63.15:0,63,1339	0/0:32,0:32:83.63:0,84,1420	0/1:21,0:21:19.67:111,0,20	0/1:22,0:22:29.17:29,0,273	0/1:25,0:25:31.45:31,0,277	1/1:1,27:30:15.05:644,15,0	0/0:24,0:24:36.10:0,36,1033	0/0:31,0:31:84.17:0,84,1751	0/0:6,0:6:11.99:0,12,154
chr10	74411375	.	T	TATGC	3506.71	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=9.610;DP=689;FS=0.000;HRun=0;HaplotypeScore=120.6326;InbreedingCoeff=-0.0680;MQ=60.98;MQ0=5;MQRankSum=-1.949;QD=11.03;ReadPosRankSum=8.898;VQSLOD=1.6451;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,20:33:30.10:729,30,0	0/0:9,0:9:21.03:0,21,291	1/1:7,0:3:0.11:0,0,0	0/0:6,0:1:2.98:0,3,21	0/0:23,0:23:45.03:0,45,533	0/0:21,0:21:54.03:0,54,637	0/0:24,0:24:50.92:0,51,536	0/0:45,0:45:50.86:0,51,465	0/1:31,0:31:99:463,0,164	0/1:28,0:28:93.12:93,0,155	0/1:22,0:22:48.42:48,0,75	0/1:20,0:20:56.79:428,0,57	0/1:26,0:26:99:420,0,162	0/0:22,0:22:45.03:0,45,518	0/0:32,0:32:75.07:0,75,886	0/1:24,0:24:99:123,0,117	0/0:30,0:30:57.08:0,57,730	0/1:24,0:24:82.80:180,0,83	0/0:28,0:27:40.62:0,41,519	0/0:24,0:24:42.05:0,42,538	0/0:36,0:36:99:0,102,1138	0/1:22,0:22:52.79:451,0,53	0/1:25,0:25:99:244,0,156	0/1:28,0:28:99:187,0,245	0/1:27,0:27:6.94:140,0,7	0/0:26,0:26:51.01:0,51,536	0/0:36,0:36:66.08:0,66,819	0/0:9,0:9:23.96:0,24,218
chr10	74412916	.	GC	G	6348.17	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.717;DP=692;FS=1.041;HRun=2;HaplotypeScore=70.1781;InbreedingCoeff=0.9941;MQ=86.49;MQ0=0;MQRankSum=-2.079;QD=35.46;ReadPosRankSum=1.836;VQSLOD=5.3991;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:40:99:1477,114,0	0/0:15,0:15:45.12:0,45,634	0/0:25,0:25:62.91:0,63,876	0/0:21,0:21:57.12:0,57,790	0/0:16,0:16:45.11:0,45,647	0/0:24,0:24:72.22:0,72,1041	0/0:29,0:29:87.26:0,87,1262	1/1:0,18:18:51.08:607,51,0	0/0:27,0:27:81.27:0,81,1210	1/1:0,35:35:99:1273,105,0	1/1:0,22:22:63.19:812,63,0	0/0:44,0:44:99:0,123,1817	0/0:21,0:21:63.18:0,63,902	0/0:39,0:39:99:0,117,1729	0/0:8,0:8:24.07:0,24,340	1/1:1,16:17:42.14:545,42,0	0/0:43,0:43:99:0,129,1932	1/1:0,35:35:96.31:1245,96,0	0/0:26,0:26:78.26:0,78,1151	0/0:13,0:13:36.09:0,36,499	0/0:45,0:45:99:0,129,1909	0/0:15,0:15:42.14:0,42,627	0/0:19,0:19:54.17:0,54,788	0/0:31,0:31:93.29:0,93,1347	1/1:0,12:12:30.10:389,30,0	0/0:16,1:17:12.22:0,12,637	0/0:15,0:14:45.04:0,45,601	0/0:20,0:20:57.14:0,57,799
chr10	74414136	.	C	CCA	6322.95	PASS	AB=0.864;AC=26;AF=0.464;AN=56;BaseQRankSum=10.673;DP=1001;FS=50.227;HRun=0;HaplotypeScore=192.5178;InbreedingCoeff=0.8816;MQ=44.85;MQ0=63;MQRankSum=-10.534;QD=15.24;ReadPosRankSum=-2.676;VQSLOD=2.6658;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,7:23:24.50:474,25,0	0/0:8,0:8:12.04:0,12,151	0/0:106,0:6:13.10:0,13,92	0/1:84,0:9:3.17:3,0,15	0/0:24,0:23:38.83:0,39,442	0/0:27,0:27:69.16:0,69,853	0/0:36,0:36:75.03:0,75,911	1/1:41,9:42:27.89:628,28,0	1/1:11,8:19:33.11:496,33,0	1/1:22,11:27:45.15:695,45,0	1/1:6,6:13:17.78:267,18,0	1/1:13,24:36:54.11:798,54,0	1/1:19,7:26:41.16:594,41,0	0/0:43,0:43:99:0,99,1246	0/0:32,0:33:93.28:0,93,1157	1/1:10,13:23:39.13:633,39,0	0/0:37,0:36:99:0,99,1207	1/1:12,6:17:38.47:556,38,0	0/0:42,0:31:19.68:0,20,524	0/0:16,0:15:35.77:0,36,410	0/0:132,0:134:99:0,288,4047	1/1:20,14:34:39.13:587,39,0	1/1:5,5:10:9.03:121,9,0	1/1:16,7:20:15.92:282,16,0	0/1:10,6:15:1.83:188,0,2	0/0:51,0:47:90.23:0,90,1128	0/0:21,0:20:39.10:0,39,486	0/0:5,0:5:9.03:0,9,114
chr10	74414164	.	ACAC	A	7845.39	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=17.470;DP=881;FS=130.262;HRun=0;HaplotypeScore=192.9987;InbreedingCoeff=0.9771;MQ=50.55;MQ0=36;MQRankSum=-14.466;QD=34.41;ReadPosRankSum=-4.586;VQSLOD=1.2004;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,17:20:56.73:883,57,0	0/0:7,0:7:15.05:0,15,309	0/0:98,0:14:28.89:0,29,454	0/0:73,0:16:39.66:0,40,559	0/0:24,0:23:59.88:0,60,1205	0/0:34,0:34:96.32:0,96,2242	0/0:38,0:38:99:0,105,2464	1/1:14,21:27:5.39:814,5,0	1/1:5,9:14:36.09:584,36,0	1/1:4,16:19:37.56:821,38,0	1/1:2,7:9:15.48:241,15,0	1/1:2,22:24:66.89:921,67,0	1/1:2,10:12:32.81:495,33,0	0/0:37,0:37:99:0,108,2375	0/0:35,0:35:99:0,102,2345	1/1:2,14:16:45.07:708,45,0	0/0:40,0:40:99:0,114,2595	1/1:9,6:14:20.25:379,20,0	0/0:31,0:29:76.10:0,76,1572	0/0:20,0:19:57.09:0,57,1139	0/0:150,0:149:99:0,392,9538	1/1:5,16:21:59.50:781,59,0	1/1:1,9:10:26.89:420,27,0	1/1:9,7:14:18.44:251,18,0	1/1:5,9:14:33.95:548,34,0	0/0:42,0:40:99:0,117,2522	0/0:17,0:16:45.15:0,45,1049	0/0:7,0:7:21.07:0,21,452
chr10	74414172	.	TAC	T	4241.68	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=14.477;DP=865;FS=145.850;HRun=0;HaplotypeScore=194.3623;InbreedingCoeff=0.8153;MQ=51.26;MQ0=23;MQRankSum=-11.432;QD=18.94;ReadPosRankSum=-2.376;VQSLOD=1.3395;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,16:22:29.81:607,30,0	0/0:5,0:5:12.04:0,12,199	0/0:88,0:14:13.60:0,14,240	0/0:65,0:17:12.09:0,12,186	0/0:22,1:22:28.98:0,29,717	0/0:31,0:31:84.27:0,84,1366	0/0:37,2:39:14.61:0,15,1280	0/1:23,0:35:19.44:19,0,232	1/1:2,9:11:30.09:349,30,0	1/1:7,13:19:12.47:434,12,0	1/1:4,7:11:5.31:222,5,0	1/1:10,16:26:54.09:604,54,0	1/1:6,6:13:26.65:271,27,0	0/0:37,0:37:90.24:0,90,1412	0/0:39,0:40:99:0,102,1567	1/1:6,10:16:36.11:434,36,0	0/0:37,0:37:90.15:0,90,1407	0/0:9,0:14:1.76:0,2,55	0/0:28,0:28:69.15:0,69,1024	0/0:17,0:16:39.13:0,39,636	0/0:146,8:152:75.01:0,75,5283	1/1:7,14:21:44.83:505,45,0	1/1:2,9:11:6.12:294,6,0	1/1:12,5:16:14.79:176,15,0	1/1:5,9:14:2.09:327,2,0	0/0:40,0:39:99:0,101,1546	0/0:16,0:15:42.14:0,42,697	0/0:6,0:6:18.06:0,18,299
chr10	74414174	.	C	CAT	1148.21	PASS	AB=0.958;AC=15;AF=0.268;AN=56;BaseQRankSum=6.450;DP=877;FS=50.544;HRun=0;HaplotypeScore=212.1202;InbreedingCoeff=-0.1245;MQ=51.55;MQ0=21;MQRankSum=-4.261;QD=4.54;ReadPosRankSum=-6.771;VQSLOD=-0.6656;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,1:23:12.64:116,0,13	0/0:4,0:4:12.04:0,12,183	0/0:79,0:14:24.88:0,25,284	0/0:59,0:16:24.63:0,25,259	0/0:23,0:22:32.03:0,32,680	0/0:31,0:31:93.19:0,93,1312	0/0:40,0:40:99:0,108,1421	0/1:42,0:37:99:322,0,121	0/1:11,2:13:15.90:87,0,16	0/1:22,0:20:40.06:40,0,98	0/1:10,1:11:26.13:90,0,26	1/1:26,0:26:0.77:158,1,0	0/1:12,2:16:29.44:87,0,29	0/0:36,0:36:96.23:0,96,1358	0/0:40,0:40:78.02:0,78,1405	0/1:18,0:18:25.08:89,0,25	0/0:38,0:38:99:0,102,1406	0/1:15,0:14:31.81:95,0,32	0/0:29,0:29:81.03:0,81,1047	0/0:17,0:16:48.04:0,48,650	0/0:159,0:158:99:0,416,5602	0/1:22,0:22:27.75:28,0,34	0/1:12,0:12:36.45:63,0,36	1/1:14,2:16:0.30:81,0,0	0/1:14,0:14:44.20:44,0,67	0/0:41,0:40:92.53:0,93,1527	0/0:16,0:15:45.14:0,45,661	0/0:6,0:6:18.06:0,18,274
chr10	74414305	.	AC	A	950.61	PASS	AB=0.989;AC=14;AF=0.250;AN=56;BaseQRankSum=12.411;DP=927;FS=142.898;HRun=2;HaplotypeScore=226.1182;InbreedingCoeff=0.0547;MQ=44.68;MQ0=91;MQRankSum=-10.277;QD=2.95;ReadPosRankSum=-3.262;VQSLOD=0.1242;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,1:23:4.26:4,0,145	0/1:19,0:17:11.90:12,0,345	0/0:47,0:9:26.96:0,27,325	0/0:59,1:11:15.86:0,16,129	0/1:33,0:32:83.77:84,0,538	0/0:22,0:20:48.56:0,49,730	0/0:40,0:38:95.65:0,96,1257	0/0:25,0:11:14.54:0,15,81	0/0:17,0:14:16.14:0,16,165	0/1:32,1:21:99:127,0,160	1/1:18,0:14:15.82:171,16,0	0/1:30,0:26:27.54:28,0,166	0/0:15,0:13:12.76:0,13,148	0/0:41,1:37:18.25:0,18,1080	0/0:31,0:28:59.10:0,59,811	1/1:9,0:5:8.92:63,9,0	0/0:29,0:25:65.25:0,65,939	0/0:18,1:15:12.56:0,13,185	0/0:30,0:15:39.09:0,39,544	0/1:28,0:24:91.24:91,0,452	0/0:152,2:150:99:0,315,4928	0/1:34,0:33:99:114,0,99	0/1:23,0:22:31.83:161,0,32	0/1:38,2:33:30.71:31,0,58	0/1:25,0:21:6.53:227,0,7	0/0:51,0:42:82.59:0,83,1433	0/0:14,0:13:15.32:0,15,334	0/0:6,0:4:10.28:0,10,133
chr10	74414306	.	C	CA	862.55	PASS	AB=0.959;AC=13;AF=0.232;AN=56;BaseQRankSum=12.131;DP=930;FS=123.634;HRun=1;HaplotypeScore=233.4291;InbreedingCoeff=0.0877;MQ=44.70;MQ0=90;MQRankSum=-10.227;QD=2.88;ReadPosRankSum=-3.817;VQSLOD=-0.1535;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:23:0.78:1,0,199	0/0:19,0:17:11.59:0,12,338	0/0:47,0:9:27.02:0,27,312	0/0:60,0:12:17.42:0,17,135	0/1:34,0:33:76.54:77,0,507	0/0:22,0:20:48.52:0,49,680	0/0:44,0:42:95.56:0,96,1194	0/0:26,0:12:14.27:0,14,77	0/0:18,0:14:26.80:0,27,183	0/1:29,2:21:99:167,0,133	1/1:18,0:15:14.82:161,15,0	0/1:30,0:26:22.62:23,0,159	0/0:14,0:12:20.99:0,21,143	0/0:42,0:37:11.40:0,11,1002	0/0:33,0:30:60.92:0,61,762	1/1:4,3:5:9.03:104,9,0	0/0:29,0:25:66.13:0,66,894	0/0:21,0:16:11.18:0,11,209	0/0:28,0:15:39.02:0,39,510	0/1:28,0:24:20.55:21,0,442	0/0:153,1:150:99:0,317,4655	0/1:32,1:32:80.12:93,0,80	0/1:22,0:21:25.68:145,0,26	0/1:39,0:32:22.16:22,0,68	0/1:16,6:19:16.82:208,0,17	0/0:51,1:43:76.78:0,77,1351	0/0:13,0:12:26.37:0,26,327	0/0:6,0:4:11.95:0,12,141
chr10	74414358	.	ACG	A	545.17	PASS	AB=0.930;AC=13;AF=0.232;AN=56;BaseQRankSum=11.161;DP=727;FS=69.999;HRun=0;HaplotypeScore=201.7378;InbreedingCoeff=-0.3184;MQ=45.94;MQ0=26;MQRankSum=-10.839;QD=1.98;ReadPosRankSum=-1.112;VQSLOD=-0.0057;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,3:17:27.77:28,0,453	0/0:10,0:10:13.62:0,14,294	0/1:58,0:7:7.27:7,0,116	0/0:73,0:10:7.19:0,7,86	0/0:29,0:28:0.43:0,0,759	0/1:9,1:9:31.22:31,0,264	0/0:32,1:31:35.08:0,35,1141	0/0:49,4:41:42.26:0,42,1921	0/1:12,1:13:38.30:38,0,139	0/1:21,1:20:39.83:40,0,571	0/0:9,0:8:6.35:0,6,204	0/1:9,4:13:35.07:134,0,35	0/1:13,1:14:99:113,0,207	0/1:26,0:26:21.86:22,0,429	0/1:36,0:35:78.85:79,0,711	0/1:14,0:13:97:97,0,198	0/0:15,0:15:18.99:0,19,577	0/1:14,2:14:92.15:92,0,430	0/0:19,1:18:14.81:0,15,595	0/0:20,0:20:22.17:0,22,504	0/0:93,0:91:99:0,197,3657	0/0:15,1:16:20.86:0,21,389	0/0:15,0:15:33.01:0,33,517	0/0:21,3:22:11.78:0,12,175	0/1:14,3:17:2.79:3,0,442	0/0:36,1:33:35.08:0,35,1113	0/1:18,0:18:5.43:5,0,292	0/0:2,0:2:4.26:0,4,61
chr10	74415101	.	CAT	C	1700.34	PASS	AB=0.988;AC=24;AF=0.429;AN=56;BaseQRankSum=6.228;DP=883;FS=0.000;HRun=0;HaplotypeScore=146.7548;InbreedingCoeff=0.7771;MQ=45.49;MQ0=46;MQRankSum=-4.186;QD=5.42;ReadPosRankSum=-2.242;VQSLOD=2.6004;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:23:9.07:118,9,0	0/1:15,0:14:12.48:12,0,172	0/0:27,0:20:59.40:0,59,569	0/0:36,0:21:35.53:0,36,435	0/0:21,0:19:17.92:0,18,150	0/0:26,0:25:3.72:0,4,332	0/0:58,0:47:25.16:0,25,306	0/0:40,0:32:78.08:0,78,594	1/1:23,0:17:11.90:89,12,0	1/1:22,0:19:8.17:279,8,0	1/1:14,0:12:8.93:66,9,0	1/1:21,1:20:14.46:186,14,0	1/1:22,0:17:32.50:225,32,0	0/0:36,0:32:41.86:0,42,608	0/0:22,0:16:19.68:0,20,281	1/1:20,0:15:12.54:126,13,0	0/0:37,0:32:5.95:0,6,504	0/1:39,0:36:54.60:55,0,251	0/0:27,0:22:36.12:0,36,371	0/0:18,0:15:31.01:0,31,236	0/0:135,0:102:64.95:0,65,890	1/1:16,0:15:13.18:94,13,0	1/1:17,1:17:26.77:193,27,0	1/1:39,3:38:28.99:254,29,0	1/1:26,0:23:33.90:219,34,0	0/0:41,0:36:30.66:0,31,502	0/0:22,0:18:16.39:0,16,209	0/0:15,0:15:38.57:0,39,352
chr10	74415521	.	TGG	T	6040.53	PASS	AB=0.765;AC=25;AF=0.446;AN=56;BaseQRankSum=6.137;DP=678;FS=11.806;HRun=4;HaplotypeScore=110.4558;InbreedingCoeff=0.8999;MQ=55.21;MQ0=64;MQRankSum=-7.215;QD=25.06;ReadPosRankSum=4.283;VQSLOD=2.6533;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,14:24:9.77:724,10,0	0/0:5,0:3:6.23:0,6,58	0/0:99,0:19:21.12:0,21,382	0/0:117,0:27:54:0,54,590	0/0:27,0:25:54.95:0,55,788	0/0:13,0:11:29.94:0,30,477	0/0:12,0:11:30.06:0,30,436	1/1:8,9:16:33.11:449,33,0	1/1:8,7:14:39.10:467,39,0	1/1:14,5:12:33.05:381,33,0	1/1:18,9:23:56.31:585,56,0	1/1:4,9:11:33.10:426,33,0	1/1:4,17:18:27.08:345,27,0	0/0:11,0:10:21.03:0,21,291	0/0:13,0:12:30.05:0,30,439	0/1:9,4:11:20.78:265,0,21	0/0:19,0:17:36.12:0,36,585	1/1:11,4:13:30.04:381,30,0	0/0:24,0:17:38.73:0,39,628	0/0:12,0:10:27.07:0,27,385	0/0:9,0:8:15.05:0,15,237	1/1:14,9:20:51.11:654,51,0	1/1:7,12:16:45.10:535,45,0	1/1:10,6:12:16.54:245,17,0	1/1:16,2:16:48.04:584,48,0	0/0:30,0:26:68.26:0,68,996	0/0:33,0:30:79.05:0,79,1179	0/0:11,0:6:15.04:0,15,211
chr10	74415523	.	GGGTTTTT	G	5926.65	PASS	AB=0.955;AC=23;AF=0.411;AN=56;BaseQRankSum=7.329;DP=699;FS=12.284;HRun=0;HaplotypeScore=152.5531;InbreedingCoeff=0.7773;MQ=53.12;MQ0=78;MQRankSum=-5.412;QD=23.33;ReadPosRankSum=5.800;VQSLOD=3.3581;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,1:25:6.68:755,0,7	0/0:5,0:3:6.49:0,6,138	0/0:98,0:18:22.06:0,22,409	0/0:120,0:28:53.27:0,53,728	0/0:27,0:25:60.51:0,61,1249	0/0:13,0:11:33.03:0,33,747	0/0:12,0:11:30.08:0,30,596	1/1:18,0:17:22.84:421,23,0	1/1:14,1:13:39.06:588,39,0	1/1:22,0:14:15.15:309,15,0	1/1:27,0:23:43.46:536,43,0	0/1:17,0:14:0.01:289,0,0	1/1:22,0:19:18.30:327,18,0	0/0:13,0:11:24.08:0,24,551	0/0:12,0:11:30.10:0,30,600	0/1:14,0:12:63.11:234,0,63	0/0:21,0:18:42.10:0,42,822	1/1:12,1:11:30:429,30,0	0/0:23,0:14:41.17:0,41,687	0/0:14,0:12:30.09:0,30,491	0/0:7,0:6:15.05:0,15,352	1/1:21,1:18:50.85:711,51,0	1/1:19,1:16:46.37:560,46,0	1/1:17,0:12:1.42:241,1,0	1/1:17,0:16:48:527,48,0	0/0:29,0:25:70.46:0,70,1326	0/0:37,0:34:93.24:0,93,1938	0/0:14,0:8:18.06:0,18,445
chr10	74415552	.	TG	T	2580.57	PASS	AB=0.966;AC=36;AF=0.643;AN=56;BaseQRankSum=10.898;DP=611;FS=123.507;HRun=1;HaplotypeScore=99.0911;InbreedingCoeff=0.0342;MQ=45.44;MQ0=79;MQRankSum=-6.793;QD=5.12;ReadPosRankSum=1.711;VQSLOD=0.2483;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,4:26:54.40:330,54,0	0/1:5,0:4:13.01:13,0,45	0/0:36,3:7:4.67:0,5,35	0/1:60,5:12:11.28:11,0,132	0/1:27,0:25:60.20:60,0,236	0/1:19,0:14:45.55:46,0,145	0/1:7,0:7:48.57:49,0,65	0/1:25,1:22:2.63:117,0,3	1/1:20,2:17:33.06:188,33,0	1/1:29,0:22:39.55:245,40,0	1/1:23,0:17:8.84:130,9,0	1/1:16,0:12:32.33:224,32,0	1/1:14,0:13:25.16:140,25,0	0/0:17,0:15:19.51:0,20,193	0/1:10,0:10:7.90:8,0,120	1/1:18,0:16:4.96:123,5,0	0/0:18,0:11:8.48:0,8,110	1/1:15,0:11:15.11:114,15,0	0/0:33,0:19:7.27:0,7,323	0/1:11,8:17:43.50:44,0,145	0/1:10,0:9:36.10:36,0,75	1/1:18,3:18:40.13:234,40,0	1/1:13,4:15:27.12:222,27,0	1/1:15,3:13:17.14:110,17,0	1/1:16,0:16:17.22:172,17,0	0/1:20,0:15:53.36:53,0,182	0/1:30,0:26:68:68,0,163	0/1:28,0:19:20.63:21,0,198
chr10	74415556	.	TTTTG	T	2633.65	PASS	AB=0.948;AC=25;AF=0.446;AN=56;BaseQRankSum=6.874;DP=605;FS=4.524;HRun=0;HaplotypeScore=126.1732;InbreedingCoeff=0.5037;MQ=49.22;MQ0=64;MQRankSum=-3.893;QD=9.02;ReadPosRankSum=-0.702;VQSLOD=2.6817;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:28:30.02:139,0,30	0/0:5,0:4:8.81:0,9,191	0/0:31,0:6:5.79:0,6,55	0/0:60,0:14:18.47:0,18,367	0/0:30,0:30:26.24:0,26,1049	0/0:19,0:16:0.98:0,1,617	0/1:7,0:7:5.70:6,0,265	1/1:27,0:24:35.94:706,36,0	1/1:23,1:19:4.14:181,4,0	1/1:8,14:19:9.97:446,10,0	1/1:23,2:19:32.91:425,33,0	1/1:17,0:13:0.70:25,1,0	1/1:14,0:13:3.13:66,3,0	0/0:19,0:18:47.92:0,48,793	0/0:11,0:11:33.07:0,33,568	0/1:11,6:16:57.65:178,0,58	0/0:16,0:10:27.03:0,27,359	1/1:18,0:14:21.40:236,21,0	0/0:33,0:22:47.74:0,48,1062	0/1:21,0:20:5.20:5,0,605	0/0:11,0:9:13.96:0,14,291	1/1:20,0:18:10.70:120,11,0	1/1:20,0:18:3.88:74,4,0	0/1:17,0:13:8.43:8,0,17	1/1:6,8:14:21.37:209,21,0	0/0:21,0:18:44.44:0,44,793	0/0:32,0:30:66.36:0,66,924	0/0:24,0:18:22.81:0,23,734
chr10	74415557	.	TTTG	T	2446.33	PASS	AB=0.930;AC=25;AF=0.446;AN=56;BaseQRankSum=10.655;DP=583;FS=17.722;HRun=0;HaplotypeScore=115.6041;InbreedingCoeff=0.5907;MQ=50.84;MQ0=48;MQRankSum=-5.294;QD=8.90;ReadPosRankSum=-1.284;VQSLOD=1.8647;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,15:27:8.38:401,0,8	0/0:4,0:4:3.85:0,4,164	0/0:31,0:6:4.63:0,5,52	0/0:57,1:15:18.22:0,18,377	0/0:29,0:29:11.18:0,11,920	0/1:19,0:16:12.10:12,0,541	0/1:7,0:7:7.09:7,0,241	1/1:24,0:21:14.51:245,15,0	1/1:17,4:18:30.64:298,31,0	1/1:20,0:18:21.22:263,21,0	1/1:24,1:19:27.19:189,27,0	1/1:13,3:13:16.62:111,17,0	1/1:12,2:13:19.32:201,19,0	0/0:19,0:19:50.84:0,51,756	0/0:12,0:12:35.45:0,35,558	0/1:16,0:16:24.35:143,0,24	0/0:15,0:10:26.92:0,27,321	1/1:18,0:14:17.60:94,18,0	0/0:29,0:22:36.40:0,36,1031	0/0:22,0:21:6.10:0,6,618	0/0:11,0:9:9.12:0,9,252	1/1:8,11:17:27.30:361,27,0	1/1:11,8:18:10.04:167,10,0	0/1:15,0:13:7.10:53,0,7	1/1:14,0:14:11.21:107,11,0	0/0:23,0:20:34.82:0,35,717	0/0:32,0:30:38.19:0,38,785	0/0:23,0:17:20.15:0,20,664
chr10	74415560	.	G	GTTT	2712.91	PASS	AB=0.927;AC=26;AF=0.464;AN=56;BaseQRankSum=4.110;DP=562;FS=6.121;HRun=6;HaplotypeScore=122.9689;InbreedingCoeff=0.5985;MQ=53.20;MQ0=39;MQRankSum=-3.234;QD=8.64;ReadPosRankSum=-0.361;VQSLOD=-0.3069;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:25:23.42:184,0,23	0/0:5,0:5:8.62:0,9,127	0/0:26,0:7:0.01:0,0,15	0/1:51,0:15:14.99:15,0,283	0/0:28,0:28:26.28:0,26,662	0/1:19,0:16:41.70:42,0,371	0/0:7,0:7:12.60:0,13,171	1/1:7,18:23:52.06:1031,52,0	0/1:13,0:19:4.11:116,0,4	1/1:18,0:17:31.19:345,31,0	1/1:12,10:18:29.07:348,29,0	1/1:16,0:13:3.41:19,3,0	1/1:12,0:11:10.39:59,10,0	0/0:21,0:21:43.10:0,43,530	0/0:14,0:14:21.76:0,22,439	1/1:14,0:15:14.23:153,14,0	0/0:15,0:10:11.33:0,11,132	1/1:10,10:16:11.34:230,11,0	0/0:27,0:23:32.95:0,33,705	0/0:21,0:20:26.81:0,27,521	0/0:11,0:9:10.96:0,11,169	1/1:15,0:15:9:150,9,0	1/1:19,0:18:9.14:61,9,0	1/1:8,1:17:4.77:25,5,0	1/1:11,0:11:8.90:136,9,0	0/0:23,0:21:41.34:0,41,517	0/0:27,0:25:34.59:0,35,506	0/0:21,0:17:28.46:0,28,466
chr10	74416173	.	GAT	G	37.74	PASS	AB=0.890;AC=7;AF=0.292;AN=24;BaseQRankSum=2.668;DP=154;FS=1.569;HRun=0;HaplotypeScore=24.0289;InbreedingCoeff=-0.0128;MQ=88.35;MQ0=1;MQRankSum=-0.161;QD=0.86;ReadPosRankSum=0.412;VQSLOD=1.1425;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,1:4:3.01:35,3,0	0/0:6,0:5:0:0,0,0	./.	./.	0/1:3,1:4:25.80:26,0,61	./.	./.	./.	./.	0/0:4,0:4:2.99:0,3,24	./.	./.	0/0:1,0:1:3.01:0,3,45	0/0:3,0:3:3.01:0,3,45	./.	0/1:16,2:20:27.33:27,0,610	0/1:13,0:13:27.94:28,0,49	./.	1/1:2,0:3:2.84:14,3,0	./.	./.	./.	./.	./.	0/0:5,0:5:3.01:0,3,45	0/0:5,0:5:3.01:0,3,45	0/0:7,0:7:15.05:0,15,234
chr10	74416315	.	CA	C	2220.16	PASS	AB=0.898;AC=21;AF=0.375;AN=56;BaseQRankSum=5.845;DP=357;FS=18.708;HRun=11;HaplotypeScore=43.2094;InbreedingCoeff=0.7253;MQ=74.30;MQ0=0;MQRankSum=-0.681;QD=12.83;ReadPosRankSum=1.827;VQSLOD=1.5646;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:41.95:344,42,0	0/0:7,0:7:15.04:0,15,160	0/1:14,0:10:8.04:8,0,59	0/0:8,0:6:1.18:0,1,52	0/0:11,0:11:24.05:0,24,247	0/0:10,0:10:27.07:0,27,288	0/0:9,0:9:21.05:0,21,223	1/1:4,19:23:36.32:405,36,0	1/1:0,4:4:8.99:74,9,0	0/0:19,0:21:59.48:0,59,578	0/0:10,0:10:30.04:0,30,302	1/1:1,8:9:23.96:197,24,0	1/1:1,12:13:35.96:295,36,0	0/0:11,1:13:11.28:0,11,309	0/0:11,0:10:27.07:0,27,288	0/0:9,0:9:21.04:0,21,216	0/0:12,1:13:5.44:0,5,263	1/1:3,15:18:32.31:270,32,0	0/1:12,2:14:13.09:13,0,283	0/0:11,0:11:27.06:0,27,282	0/0:15,0:15:33.95:0,34,346	1/1:0,10:10:26.97:222,27,0	1/1:4,10:14:23.96:197,24,0	1/1:0,16:16:47.95:394,48,0	0/0:13,0:13:30.08:0,30,320	0/1:12,2:15:9.54:10,0,281	0/0:16,0:15:42.08:0,42,434	0/0:7,0:7:21.05:0,21,224
chr10	74419098	.	G	GCA	12716.52	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=1.406;DP=642;FS=0.986;HRun=0;HaplotypeScore=93.3477;InbreedingCoeff=0.9988;MQ=77.62;MQ0=1;MQRankSum=-1.705;QD=45.25;ReadPosRankSum=0.734;VQSLOD=6.0306;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:93.32:1631,93,0	0/0:12,0:12:33.11:0,33,446	0/0:25,0:24:35.15:0,35,601	0/0:23,0:23:43.58:0,44,611	0/0:26,0:26:72.24:0,72,974	0/0:17,0:17:48.16:0,48,649	0/0:20,0:20:51.17:0,51,690	1/1:1,28:30:87.24:1415,87,0	1/1:1,14:15:39.13:683,39,0	1/1:2,25:27:72.25:1262,72,0	1/1:2,14:20:42.14:736,42,0	1/1:1,14:15:39.13:682,39,0	1/1:4,18:22:60.21:1043,60,0	0/0:24,0:24:63.21:0,63,852	0/0:25,0:25:66.22:0,66,893	1/1:0,22:22:66.23:1156,66,0	0/0:30,0:30:84.26:0,84,1120	1/1:6,5:11:18.06:315,18,0	0/0:20,0:20:54.18:0,54,731	0/0:28,0:28:75.25:0,75,1014	0/0:25,0:25:72.24:0,72,973	1/1:0,18:18:48.16:841,48,0	1/1:0,17:17:48.16:842,48,0	1/1:4,20:24:59.42:1006,59,0	1/1:1,23:24:63.22:1104,63,0	0/0:32,0:32:92.79:0,93,1257	0/0:36,0:36:93.30:0,93,1241	0/0:18,0:18:54.18:0,54,730
chr10	74419512	.	CA	C	1338.58	PASS	AB=0.882;AC=14;AF=0.250;AN=56;BaseQRankSum=7.229;DP=454;FS=5.467;HRun=12;HaplotypeScore=41.6856;InbreedingCoeff=0.8235;MQ=61.16;MQ0=17;MQRankSum=0.083;QD=11.54;ReadPosRankSum=1.294;VQSLOD=2.7339;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,2:28:45.84:0,46,621	0/0:4,0:4:12.01:0,12,115	0/0:38,0:7:16.51:0,17,85	0/0:26,0:8:10.53:0,11,59	0/0:26,2:28:42.77:0,43,577	0/0:25,1:26:36.79:0,37,532	0/0:18,1:16:21.81:0,22,366	1/1:9,17:22:50.68:379,51,0	0/0:8,0:8:18.02:0,18,176	1/1:1,13:14:38.83:298,39,0	1/1:2,12:14:23.69:170,24,0	0/0:10,0:9:18.04:0,18,183	0/0:9,0:9:21.02:0,21,206	0/0:10,0:10:18.04:0,18,183	0/0:10,0:10:15.02:0,15,146	1/1:1,6:7:11.95:93,12,0	0/0:19,1:19:27.45:0,27,423	1/1:1,15:16:26.86:205,27,0	0/0:17,0:16:42.04:0,42,401	0/0:13,0:13:30.02:0,30,289	0/1:6,1:7:5.21:5,0,127	0/0:12,0:12:9.43:0,9,235	0/0:13,0:12:27.04:0,27,267	0/1:7,1:8:2.19:2,0,162	1/1:2,22:24:47.81:371,48,0	0/0:16,1:17:21.83:0,22,388	0/0:14,0:14:41.85:0,42,397	0/0:15,0:14:39.03:0,39,374
chr10	74421102	.	ACATGCATG	A	1147.31	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=3.151;DP=576;FS=1.830;HRun=0;HaplotypeScore=164.6512;InbreedingCoeff=0.7874;MQ=64.89;MQ0=0;MQRankSum=-4.639;QD=26.08;ReadPosRankSum=-3.358;VQSLOD=3.0923;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:54.08:0,54,1951	0/0:11,0:11:15.05:0,15,614	0/0:8,0:6:3.01:0,3,52	0/1:7,0:6:0.14:6,0,0	0/0:29,0:29:66.17:0,66,2539	0/0:25,0:25:63.20:0,63,2353	0/0:30,0:30:63.67:0,64,2450	1/1:8,21:29:59.53:1100,60,0	0/0:25,0:25:63.19:0,63,2235	0/0:22,0:22:45.15:0,45,1825	0/0:21,0:21:57.20:0,57,2261	0/0:23,0:23:51.16:0,51,1880	0/0:11,0:11:21.04:0,21,793	0/0:25,0:25:63.19:0,63,2387	0/0:22,0:22:54.15:0,54,1974	0/0:25,0:25:57.20:0,57,2298	0/0:20,0:20:42.13:0,42,1654	1/1:3,5:8:6.02:157,6,0	0/0:14,0:13:24.07:0,24,885	0/0:17,0:17:48.16:0,48,1976	0/0:20,0:20:45.12:0,45,1754	0/0:19,0:19:41.40:0,41,1664	0/0:15,0:15:35.91:0,36,1368	0/0:19,0:19:27.07:0,27,941	0/0:26,0:26:51.16:0,51,1858	0/0:21,0:21:57.20:0,57,2342	0/0:41,0:41:96.28:0,96,3746	0/0:12,0:12:15.05:0,15,624
chr10	74421129	.	TGA	T	1384.53	PASS	AB=0.895;AC=25;AF=0.481;AN=52;BaseQRankSum=6.306;DP=628;FS=2.371;HRun=0;HaplotypeScore=108.7486;InbreedingCoeff=0.5402;MQ=56.68;MQ0=7;MQRankSum=1.268;QD=4.11;ReadPosRankSum=2.481;VQSLOD=2.5566;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,14:26:27.07:300,27,0	0/0:9,0:11:15.50:0,15,187	./.	./.	0/0:30,0:30:0.13:0,0,375	0/0:28,0:28:45.85:0,46,559	0/0:27,0:26:35.95:0,36,497	0/0:36,0:36:23.87:0,24,168	1/1:16,0:22:7.28:61,7,0	1/1:18,10:28:3.92:227,4,0	1/1:18,11:29:8.73:100,9,0	1/1:14,1:28:8.52:42,9,0	1/1:7,0:16:5.26:36,5,0	0/0:24,0:24:15.33:0,15,416	0/0:21,2:23:8.73:0,9,531	0/1:10,13:23:6.05:355,0,6	0/1:24,0:23:1.10:1,0,561	0/0:10,0:10:8.96:0,9,84	0/0:14,0:13:9.02:0,9,118	0/1:23,0:23:3.36:3,0,346	0/0:23,0:23:19.69:0,20,233	1/1:16,0:17:10.55:63,11,0	1/1:9,0:16:11.36:65,11,0	1/1:9,0:18:11.36:56,11,0	1/1:15,3:21:26.51:236,27,0	0/1:28,3:30:13.07:13,0,345	0/0:40,0:41:23.74:0,24,818	0/1:11,1:12:9.31:9,0,282
chr10	74424547	.	GA	G	3791.73	PASS	AB=0.781;AC=26;AF=0.464;AN=56;BaseQRankSum=9.521;DP=458;FS=5.313;HRun=11;HaplotypeScore=50.1729;InbreedingCoeff=0.8136;MQ=69.44;MQ0=0;MQRankSum=0.828;QD=17.55;ReadPosRankSum=2.073;VQSLOD=4.6968;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:16:35.94:296,36,0	0/0:8,0:8:24.06:0,24,255	0/0:13,0:8:15.49:0,15,148	0/1:9,0:8:7.68:8,0,50	0/0:16,0:16:45.07:0,45,468	0/0:17,0:17:42.06:0,42,430	0/0:9,1:11:5.15:0,5,212	1/1:7,17:24:21.94:387,22,0	1/1:4,12:19:13.08:281,13,0	1/1:5,14:19:44.90:364,45,0	1/1:4,16:20:47.93:394,48,0	1/1:1,13:14:29.96:246,30,0	1/1:3,17:20:10.05:288,10,0	0/0:14,0:14:30.08:0,30,320	0/0:17,1:18:22.70:0,23,430	1/1:1,10:11:26.97:222,27,0	0/0:22,2:24:41.50:0,41,637	1/1:2,15:17:38.95:320,39,0	0/0:22,0:23:43.36:0,43,497	0/0:21,0:21:51.12:0,51,540	0/0:18,0:18:42.11:0,42,448	1/1:0,9:9:26.97:222,27,0	0/1:2,7:9:7.89:148,0,8	1/1:1,8:9:17.98:148,18,0	1/1:1,19:20:56.93:468,57,0	0/0:11,1:12:5.43:0,5,263	0/0:33,0:33:90.18:0,90,933	0/0:10,1:12:5.26:0,5,246
chr10	74426125	.	CT	C	4202.31	PASS	AB=0.789;AC=26;AF=0.464;AN=56;BaseQRankSum=8.656;DP=648;FS=2.474;HRun=13;HaplotypeScore=72.1940;InbreedingCoeff=0.7812;MQ=72.84;MQ0=1;MQRankSum=-0.317;QD=13.64;ReadPosRankSum=3.125;VQSLOD=4.3538;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,22:29:20.51:305,21,0	0/0:3,0:3:0:0,0,0	0/0:31,0:17:16.71:0,17,201	0/1:18,0:14:7.96:20,0,8	0/0:28,1:29:47.11:0,47,583	0/0:16,2:19:19.29:0,19,371	0/0:19,2:21:4.27:0,4,365	0/1:11,16:27:4.75:290,0,5	1/1:6,17:24:43.77:312,44,0	1/1:1,24:26:64.63:463,65,0	1/1:6,12:19:15.39:182,15,0	1/1:1,15:16:36.42:299,36,0	1/1:6,8:14:20.83:153,21,0	0/0:19,2:21:10.40:0,10,417	0/0:25,0:27:65.64:0,66,594	1/1:3,25:28:65.58:481,66,0	0/0:28,1:29:56.22:0,56,707	1/1:4,11:16:28.42:202,28,0	0/0:17,0:17:3.61:0,4,184	0/0:31,0:31:63.05:0,63,589	0/0:22,0:25:32.50:0,32,467	1/1:3,15:18:38.74:284,39,0	1/1:3,14:17:38.70:284,39,0	1/1:0,23:23:62.64:460,63,0	1/1:4,26:32:64.63:465,65,0	0/0:32,1:33:44.17:0,44,578	0/0:33,6:40:2.34:0,2,650	0/0:13,0:13:18.03:0,18,175
chr10	74426710	.	A	AACCG	24377.60	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-16.361;DP=710;FS=5.814;HRun=0;HaplotypeScore=105.9391;InbreedingCoeff=0.9998;MQ=85.09;MQ0=0;MQRankSum=-5.677;QD=76.90;ReadPosRankSum=2.464;VQSLOD=7.0108;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,42:46:99:2988,105,0	0/0:10,0:10:27.09:0,27,566	0/0:23,0:23:69.04:0,69,1353	0/0:29,0:29:86.07:0,86,1638	0/0:25,0:25:75.24:0,75,1533	0/0:25,0:25:69.24:0,69,1447	0/0:26,0:26:78.25:0,78,1597	1/1:5,15:21:63.18:1730,63,0	1/1:1,14:16:45.15:1227,45,0	1/1:1,23:27:81.25:2061,81,0	1/1:1,15:16:42.14:1173,42,0	1/1:1,36:37:99:3126,108,0	1/1:3,29:33:90.31:2603,90,0	0/0:38,0:38:99:0,111,2315	0/0:36,0:36:99:0,108,2235	1/1:0,27:28:78.27:2252,78,0	0/0:32,0:32:96.33:0,96,2009	1/1:2,22:24:66.23:1862,66,0	0/0:29,0:29:78.24:0,78,1500	0/0:20,0:20:57.18:0,57,1158	0/0:28,0:28:84.29:0,84,1748	1/1:1,13:14:42.14:1175,42,0	1/1:1,16:17:51.18:1471,51,0	1/1:5,15:22:57.20:1496,57,0	1/1:1,14:16:42.14:1214,42,0	0/0:25,0:25:75.26:0,75,1562	0/0:32,0:32:93.30:0,93,1892	0/0:15,0:15:45.13:0,45,846
chr10	74426865	.	GA	G	4944.33	PASS	AB=0.666;AC=24;AF=0.429;AN=56;BaseQRankSum=10.362;DP=515;FS=4.842;HRun=11;HaplotypeScore=54.5181;InbreedingCoeff=0.6914;MQ=70.02;MQ0=0;MQRankSum=-1.401;QD=18.94;ReadPosRankSum=2.620;VQSLOD=6.0399;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:5,13:18:24.99:232,0,25	0/0:7,0:7:18.05:0,18,192	0/1:8,1:10:7.02:7,0,114	0/0:8,0:7:3:0,3,29	0/0:38,1:40:52.67:0,53,915	0/0:13,0:13:36.08:0,36,377	0/0:12,0:12:33.07:0,33,345	0/1:8,10:19:40.73:208,0,41	1/1:1,12:13:35.94:296,36,0	1/1:1,14:15:38.91:316,39,0	1/1:3,23:26:68.90:566,69,0	0/1:2,11:13:15.74:210,0,16	1/1:4,20:24:53.92:443,54,0	0/0:15,1:17:17.30:0,17,373	0/0:19,1:20:26.48:0,26,487	1/1:2,19:21:50.94:419,51,0	0/0:20,0:20:47.79:0,48,491	1/1:1,16:17:44.94:369,45,0	0/0:20,1:21:26.51:0,27,468	0/0:29,0:30:74.98:0,75,756	0/0:8,0:8:21.03:0,21,210	1/1:2,16:18:47.94:394,48,0	1/1:1,25:26:71.92:591,72,0	1/1:0,18:19:43.99:350,44,0	1/1:0,22:22:65.92:542,66,0	0/0:19,0:19:45.11:0,45,474	0/0:33,1:34:68.59:0,69,914	0/0:5,0:5:12.03:0,12,128
chr10	74427083	.	C	CA	12841.44	PASS	AB=0.938;AC=27;AF=0.482;AN=56;BaseQRankSum=-16.456;DP=624;FS=14.568;HRun=0;HaplotypeScore=55.2619;InbreedingCoeff=0.9278;MQ=82.85;MQ0=0;MQRankSum=-1.569;QD=40.13;ReadPosRankSum=3.141;VQSLOD=3.8942;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:93.32:1486,93,0	0/0:8,0:8:24.08:0,24,334	0/0:19,0:19:54.18:0,54,749	0/0:16,0:16:41.83:0,42,542	0/0:15,0:15:45.15:0,45,626	0/0:24,0:24:69.22:0,69,945	0/0:10,0:10:27.09:0,27,378	1/1:2,25:27:75.23:1150,75,0	1/1:0,23:23:57.19:911,57,0	1/1:0,24:24:72.21:1084,72,0	1/1:1,20:21:57.19:883,57,0	1/1:2,14:16:39.13:624,39,0	1/1:1,31:32:78.22:1218,78,0	0/0:21,0:21:63.21:0,63,881	0/0:31,0:31:90.30:0,90,1252	1/1:0,26:26:72.25:1151,72,0	0/1:14,1:15:47.96:48,0,484	1/1:0,19:19:48.16:767,48,0	0/0:33,0:33:96.31:0,96,1324	0/0:27,0:27:81.24:0,81,1107	0/0:29,0:29:87.27:0,87,1197	1/1:0,22:22:63.21:992,63,0	1/1:0,15:15:45.15:705,45,0	1/1:0,21:21:57.19:911,57,0	1/1:0,24:24:57.19:911,57,0	0/0:32,0:32:96.32:0,96,1341	0/0:31,0:31:90.30:0,90,1258	0/0:8,0:8:24.06:0,24,316
chr10	74427839	.	GACAC	G	827.20	PASS	AB=0.718;AC=3;AF=0.054;AN=56;BaseQRankSum=6.478;DP=733;FS=13.947;HRun=0;HaplotypeScore=152.0737;InbreedingCoeff=0.5911;MQ=58.59;MQ0=12;MQRankSum=-3.253;QD=13.79;ReadPosRankSum=-2.437;VQSLOD=2.2140;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:89.63:0,90,1673	0/0:5,0:5:14.64:0,15,278	0/0:29,0:8:6.97:0,7,155	0/0:25,0:8:17.87:0,18,168	0/0:24,0:32:65.48:0,65,1357	0/0:16,0:18:35.86:0,36,803	0/0:18,0:22:23.79:0,24,449	1/1:16,16:27:42.06:575,42,0	0/0:25,0:26:33.57:0,34,1147	0/0:23,0:21:42.04:0,42,697	0/0:24,0:25:49.38:0,49,872	0/0:31,0:30:66.21:0,66,1188	0/0:25,0:25:57.20:0,57,1105	0/0:19,0:20:41.93:0,42,929	0/0:33,0:35:78:0,78,1758	0/0:31,0:31:60.21:0,60,1098	0/0:47,0:48:32.36:0,32,1500	0/1:17,11:28:94.16:359,0,94	0/0:15,0:15:33.08:0,33,619	0/0:12,0:12:27.08:0,27,508	0/0:40,1:39:16.13:0,16,1129	0/0:15,0:15:33.10:0,33,567	0/0:16,0:16:33.11:0,33,615	0/0:34,0:36:81.11:0,81,1452	0/0:17,0:17:43.53:0,44,795	0/0:28,1:32:28.64:0,29,1501	0/0:24,0:24:62.82:0,63,1435	0/0:15,0:14:27.09:0,27,583
chr10	74429383	.	G	GCTCGCT	3868.31	PASS	AB=0.763;AC=22;AF=0.393;AN=56;BaseQRankSum=9.644;DP=540;FS=34.156;HRun=0;HaplotypeScore=133.0279;InbreedingCoeff=0.8523;MQ=77.03;MQ0=1;MQRankSum=-8.570;QD=21.37;ReadPosRankSum=-3.405;VQSLOD=1.2058;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:20:9.03:227,9,0	0/0:8,0:8:24.03:0,24,528	0/0:32,0:31:82.38:0,82,1657	0/0:30,0:26:45.02:0,45,1321	0/0:21,0:21:63.22:0,63,1466	0/0:14,0:14:42.14:0,42,987	0/0:15,0:15:45.14:0,45,1052	0/0:22,0:22:15.91:0,16,262	1/1:1,11:15:15.05:513,15,0	1/1:1,8:11:28.26:485,28,0	0/1:1,6:10:0:0,0,0	1/1:3,15:20:23.82:677,24,0	1/1:1,14:18:8.82:342,9,0	0/0:30,0:30:90.31:0,90,2150	0/0:36,0:36:99:0,108,2427	1/1:4,12:16:20.26:532,20,0	0/0:17,0:17:42.10:0,42,938	0/1:7,0:7:13.59:39,0,14	0/0:24,0:24:66.22:0,66,1387	0/0:19,0:19:57.20:0,57,1340	0/0:24,0:24:66.23:0,66,1594	1/1:6,0:14:11.73:233,12,0	1/1:2,15:21:15.02:258,15,0	1/1:9,0:11:6.02:126,6,0	1/1:3,9:14:11.99:435,12,0	0/0:21,0:21:60.21:0,60,1388	0/0:27,0:27:78.25:0,78,1779	0/0:18,0:18:51.15:0,51,1186
chr10	74431697	.	ATTTGTTTGTTTG	A	9923.67	PASS	AB=0.865;AC=24;AF=0.429;AN=56;BaseQRankSum=13.800;DP=645;FS=6.098;HRun=0;HaplotypeScore=222.0082;InbreedingCoeff=0.8683;MQ=62.65;MQ0=3;MQRankSum=-12.814;QD=37.03;ReadPosRankSum=0.207;VQSLOD=3.9981;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,14:30:36.12:1188,36,0	0/0:7,0:7:18.06:0,18,1059	0/0:29,0:21:21.07:0,21,752	0/0:29,0:25:27.09:0,27,1314	0/0:24,0:24:51.17:0,51,2556	0/0:26,0:26:69.24:0,69,3772	0/0:23,0:23:45.13:0,45,2197	0/0:20,0:29:25.58:0,26,497	1/1:9,13:22:27.09:939,27,0	1/1:9,16:26:51.15:1558,51,0	1/1:6,8:14:18.06:608,18,0	1/1:10,10:20:30.10:1043,30,0	1/1:12,8:20:15.05:522,15,0	0/0:21,0:21:42.14:0,42,2081	0/0:32,0:32:75.26:0,75,3951	1/1:9,12:21:33.11:1148,33,0	0/0:25,0:25:48.16:0,48,2546	0/1:11,0:16:2.63:3,0,112	0/0:19,0:17:24.08:0,24,1186	0/0:23,0:23:57.18:0,57,2784	0/0:37,0:37:81.28:0,81,4521	1/1:7,8:15:15.05:522,15,0	1/1:7,13:20:28.92:1004,29,0	1/1:11,6:17:14.49:521,14,0	1/1:7,9:16:24.08:835,24,0	0/1:30,1:31:35.13:35,0,3447	0/0:30,0:30:69.24:0,69,3870	0/0:23,0:23:45.15:0,45,2481
chr10	74436193	.	AG	A	625.41	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=3.276;DP=226;FS=19.316;HRun=1;HaplotypeScore=34.1555;InbreedingCoeff=0.4643;MQ=75.67;MQ0=4;MQRankSum=-2.023;QD=9.62;ReadPosRankSum=-0.993;VQSLOD=-0.6732;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:3.68:0,4,17	0/0:2,0:2:3.01:0,3,44	0/0:36,2:15:5.96:0,6,154	0/0:20,0:9:6.06:0,6,62	0/1:1,0:1:0:0,0,0	0/0:8,0:8:14.89:0,15,158	0/0:11,0:11:24.06:0,24,302	1/1:1,13:13:39.12:497,39,0	0/0:4,0:4:2.05:0,2,22	0/0:4,0:3:0.40:0,0,1	0/0:2,0:2:2.75:0,3,24	1/1:10,0:10:4.92:24,5,0	0/0:6,0:6:3.73:0,4,17	0/0:9,0:9:24.06:0,24,310	0/0:9,0:9:24.07:0,24,299	0/1:8,0:8:0.25:0,0,13	0/0:9,0:9:17.95:0,18,208	1/1:13,0:12:23.96:213,24,0	0/0:5,0:5:15.04:0,15,208	0/0:2,0:2:5.89:0,6,59	0/0:7,0:7:11.94:0,12,130	1/1:3,0:3:4.20:21,4,0	0/0:3,0:3:2.49:0,2,22	0/1:4,0:4:0.58:1,0,1	0/1:12,0:12:7.21:7,0,12	0/0:7,0:7:12.03:0,12,157	0/0:4,0:4:12.02:0,12,151	0/0:3,0:3:8.97:0,9,70
chr10	74437523	.	TA	T	4097.55	PASS	AB=0.870;AC=23;AF=0.411;AN=56;BaseQRankSum=10.173;DP=528;FS=1.139;HRun=11;HaplotypeScore=60.1746;InbreedingCoeff=0.8556;MQ=73.93;MQ0=1;MQRankSum=-1.105;QD=17.36;ReadPosRankSum=4.274;VQSLOD=4.5825;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,12:16:34.97:277,35,0	0/0:3,0:3:9.02:0,9,96	0/0:12,1:13:3.89:0,4,161	0/0:13,1:14:22:0,22,189	0/0:26,0:27:78.03:0,78,813	0/0:19,0:19:48.11:0,48,505	0/0:10,0:10:27.06:0,27,281	0/0:30,0:32:72.48:0,72,745	1/1:2,10:12:29.96:246,30,0	1/1:3,30:33:89.87:736,90,0	1/1:3,27:30:80.90:665,81,0	1/1:2,15:17:40.99:326,41,0	1/1:4,18:22:44.81:369,45,0	0/0:14,0:14:33.95:0,34,338	0/0:21,0:21:57.12:0,57,593	1/1:5,14:19:41.94:345,42,0	0/0:12,0:12:30.04:0,30,308	0/0:10,0:10:30.04:0,30,308	0/1:17,3:19:20.89:21,0,397	0/0:31,2:33:19.29:0,19,793	0/0:10,0:10:21.05:0,21,224	1/1:4,12:17:0.06:196,0,0	1/1:3,17:21:49.47:399,49,0	1/1:1,6:7:14.98:123,15,0	1/1:4,18:22:47.94:394,48,0	0/0:21,1:21:27.72:0,28,485	0/0:33,3:35:34.89:0,35,763	0/0:16,0:16:39.10:0,39,416
chr10	74437923	.	TA	T	5451.95	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=13.682;DP=635;FS=1.796;HRun=10;HaplotypeScore=60.9859;InbreedingCoeff=0.9958;MQ=68.66;MQ0=0;MQRankSum=-1.964;QD=22.16;ReadPosRankSum=3.780;VQSLOD=5.7385;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:42.17:477,42,0	0/0:10,0:10:27.06:0,27,291	0/0:18,0:16:36.09:0,36,394	0/0:7,0:7:18.05:0,18,199	0/0:47,0:47:99:0,132,1444	0/0:31,0:31:81.22:0,81,896	0/0:14,0:14:39.11:0,39,431	0/0:30,0:29:69.17:0,69,749	1/1:2,20:22:53.99:469,54,0	1/1:3,24:27:68.97:599,69,0	1/1:1,25:26:74.98:651,75,0	1/1:5,16:21:47.96:417,48,0	1/1:1,29:30:80.97:703,81,0	0/0:16,0:16:48.13:0,48,531	0/0:36,0:36:99:0,105,1154	1/1:1,29:30:74.98:651,75,0	0/0:16,0:16:36.10:0,36,398	0/0:12,0:12:30.08:0,30,332	0/0:19,0:19:48.12:0,48,524	0/0:39,0:39:99:0,99,1072	0/0:15,1:17:14.70:0,15,358	1/1:6,16:22:47.98:417,48,0	1/1:2,8:10:23.99:208,24,0	1/1:0,13:13:38.99:339,39,0	1/1:3,21:24:59.98:521,60,0	0/0:25,1:26:40.12:0,40,670	0/0:38,0:38:99:0,111,1206	0/0:13,0:13:36.10:0,36,398
chr10	74438352	.	GTA	G	944.08	PASS	AB=0.929;AC=8;AF=0.148;AN=54;BaseQRankSum=5.402;DP=211;FS=3.606;HRun=0;HaplotypeScore=29.8914;InbreedingCoeff=0.2134;MQ=72.05;MQ0=1;MQRankSum=3.855;QD=13.30;ReadPosRankSum=-2.142;VQSLOD=2.2069;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:2.24:0,2,5	0/0:2,0:2:6.02:0,6,96	0/0:4,0:2:3.73:0,4,17	0/1:14,0:8:9.06:22,0,9	0/1:5,0:5:12.73:13,0,128	0/0:15,0:15:39.13:0,39,626	0/0:2,0:2:2.99:0,3,24	1/1:5,27:32:81.15:931,81,0	0/0:1,0:4:3:0,3,27	0/0:7,0:7:18.06:0,18,297	0/0:11,0:11:24.08:0,24,390	0/0:0,0:4:6:0,6,53	0/0:1,0:8:9:0,9,79	0/0:8,0:8:24.08:0,24,387	0/0:4,0:4:12.04:0,12,193	0/0:6,0:6:15.05:0,15,237	0/0:15,0:15:44.74:0,45,704	1/1:0,2:2:3.01:38,3,0	0/1:10,2:12:45.63:46,0,352	0/0:8,0:8:21.07:0,21,337	./.	0/0:1,0:1:1.25:0,1,3	0/0:1,0:3:3:0,3,27	0/0:2,0:2:4.55:0,5,29	0/0:5,0:5:12.04:0,12,195	0/0:8,0:8:21.06:0,21,322	0/1:5,1:6:25.81:26,0,130	0/0:18,0:18:54.18:0,54,860
chr10	74440966	.	A	AGTGT	2254.22	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.187;DP=445;FS=1.528;HRun=0;HaplotypeScore=69.5595;InbreedingCoeff=0.8378;MQ=51.20;MQ0=29;MQRankSum=-5.970;QD=50.09;ReadPosRankSum=-2.981;VQSLOD=3.1530;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:36.12:0,36,672	0/0:8,0:8:18.06:0,18,336	0/0:9,0:2:3.01:0,3,54	0/0:19,0:3:5.96:0,6,101	0/0:11,0:11:27.09:0,27,504	0/0:15,0:14:36.12:0,36,672	0/0:7,0:6:18.06:0,18,321	1/1:13,12:22:51.14:1273,51,0	0/0:24,0:21:50.75:0,51,952	0/0:20,0:19:48.16:0,48,896	0/0:13,0:12:36.12:0,36,672	0/0:24,0:24:63.52:0,64,1169	0/0:9,0:9:21.07:0,21,392	0/0:18,0:18:33.11:0,33,616	0/0:13,0:13:33.11:0,33,616	0/0:24,0:21:36.59:0,37,673	0/0:20,0:20:45.15:0,45,831	1/1:5,15:17:42.14:1102,42,0	0/0:17,0:12:30.10:0,30,558	0/0:15,0:15:36.11:0,36,641	0/0:15,0:13:33.11:0,33,611	0/0:12,0:11:27.09:0,27,501	0/0:10,0:10:24.08:0,24,448	0/0:16,0:14:30.10:0,30,560	0/0:15,0:14:39.13:0,39,728	0/0:19,0:18:54.19:0,54,1003	0/0:22,0:21:61.06:0,61,1087	0/0:6,0:6:9.03:0,9,168
chr10	74441301	.	C	CT	3014	PASS	AB=0.851;AC=30;AF=0.536;AN=56;BaseQRankSum=-5.768;DP=455;FS=2.104;HRun=12;HaplotypeScore=48.5407;InbreedingCoeff=0.4702;MQ=63.27;MQ0=0;MQRankSum=1.293;QD=9.66;ReadPosRankSum=-0.117;VQSLOD=2.3289;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,32:41:74.83:700,75,0	0/0:7,0:7:20.88:0,21,153	0/1:7,0:6:13.10:24,0,13	0/1:5,0:4:6.24:6,0,6	0/0:18,1:20:13.67:0,14,255	0/0:13,0:15:36.86:0,37,252	0/0:12,0:13:26.41:0,26,185	1/1:17,18:35:51.05:480,51,0	1/1:3,14:18:29.98:276,30,0	1/1:5,5:10:11.94:105,12,0	1/1:1,15:16:32.96:302,33,0	1/1:7,6:13:9.01:88,9,0	1/1:5,12:18:23.85:207,24,0	0/0:14,0:15:16.83:0,17,115	0/1:17,1:19:0.37:0,0,150	0/1:7,11:19:7.05:87,0,7	0/0:14,2:16:3.56:0,4,187	1/1:4,14:19:10.84:255,11,0	0/0:21,0:22:46.70:0,47,332	0/1:18,3:21:7.84:8,0,221	0/0:8,0:9:16.91:0,17,115	1/1:0,3:3:6.01:58,6,0	1/1:4,6:10:15.02:146,15,0	0/1:4,11:17:11.09:200,0,11	1/1:2,15:16:26.88:248,27,0	0/0:24,1:26:43.66:0,44,312	0/1:17,1:18:5.47:5,0,127	0/1:5,1:6:14.26:14,0,73
chr10	74443623	.	AAAAAG	A	2289.06	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.984;DP=812;FS=3.274;HRun=0;HaplotypeScore=166.0280;InbreedingCoeff=0.9957;MQ=66.21;MQ0=4;MQRankSum=-2.653;QD=38.15;ReadPosRankSum=-4.083;VQSLOD=3.0318;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,3211	0/0:10,0:10:24.05:0,24,571	0/0:19,0:11:19.54:0,20,477	0/0:36,0:25:56.75:0,57,948	0/0:23,0:23:60.10:0,60,1348	0/0:28,0:28:78.18:0,78,1997	0/0:25,0:25:60.15:0,60,1604	1/1:3,41:44:99:1862,123,0	0/0:22,0:22:57.13:0,57,1368	0/0:43,0:43:99:0,120,2998	0/0:32,0:32:87.24:0,87,2402	0/0:36,0:36:99:0,105,2915	0/0:28,0:28:72.16:0,72,1795	0/0:22,0:22:63.19:0,63,1722	0/0:44,0:44:99:0,126,3249	0/0:39,0:39:99:0,102,2799	0/0:36,0:36:99:0,99,2468	1/1:3,13:16:30.02:548,30,0	0/0:25,0:25:63.21:0,63,1792	0/0:38,0:38:99:0,108,3121	0/0:27,0:27:69.22:0,69,1916	0/0:32,0:32:90.17:0,90,2228	0/0:29,0:29:84.20:0,84,2075	0/0:18,0:17:54.19:0,54,1585	0/0:20,0:20:54.14:0,54,1375	0/0:32,0:32:84.27:0,84,2291	0/0:29,0:28:87.28:0,87,2434	0/0:15,0:15:39.01:0,39,901
chr10	74446344	.	CA	C	622.81	PASS	AC=14;AF=0.389;AN=36;BaseQRankSum=4.703;DP=214;FS=3.046;HRun=12;HaplotypeScore=32.5034;InbreedingCoeff=0.5768;MQ=55.25;MQ0=49;MQRankSum=-3.492;QD=12.71;ReadPosRankSum=1.191;VQSLOD=2.8911;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:2,0:2:5.94:0,6,42	./.	0/0:51,1:10:0.01:0,0,31	0/0:2,2:4:3.01:0,3,30	0/0:6,0:6:9.18:0,9,141	0/0:3,0:3:3.01:0,3,30	1/1:3,10:12:29.84:232,30,0	1/1:1,2:2:5.98:46,6,0	./.	./.	1/1:1,2:2:5.98:46,6,0	./.	0/0:4,0:3:6.01:0,6,61	0/0:3,0:3:3.01:0,3,30	1/1:0,3:3:5.98:46,6,0	0/0:28,1:28:30.54:0,31,431	1/1:9,14:21:44.70:341,45,0	0/0:3,0:2:5.85:0,6,44	./.	./.	./.	./.	1/1:1,1:2:2.99:23,3,0	1/1:0,2:2:2.99:23,3,0	./.	0/0:4,0:3:8.97:0,9,70	0/0:11,0:6:9.02:0,9,91
chr10	74446367	.	A	AAT	1142.44	PASS	AC=4;AF=0.091;AN=44;BaseQRankSum=2.239;DP=289;FS=0.769;HRun=0;HaplotypeScore=42.6176;InbreedingCoeff=0.4784;MQ=55.40;MQ0=38;MQRankSum=-0.319;QD=24.84;ReadPosRankSum=1.284;VQSLOD=3.6921;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:6.01:0,6,62	0/0:2,0:2:6.02:0,6,84	0/0:69,0:8:11.07:0,11,136	0/0:73,0:20:17.83:0,18,169	0/0:1,0:1:3.01:0,3,42	0/0:7,0:7:18.51:0,19,219	0/0:4,0:4:9.89:0,10,95	1/1:5,16:20:45.06:567,45,0	0/0:1,0:1:3.01:0,3,42	0/0:2,0:2:6.02:0,6,84	./.	0/0:3,0:2:6.02:0,6,82	0/0:2,0:2:4.56:0,5,31	0/0:4,0:4:12.02:0,12,135	0/0:2,0:2:3.01:0,3,42	0/0:3,0:3:6.02:0,6,84	0/0:29,0:28:66.17:0,66,861	1/1:5,19:22:47.73:689,48,0	0/0:11,0:10:29.80:0,30,320	./.	./.	./.	./.	0/0:2,0:2:3.01:0,3,41	0/0:3,0:3:6.02:0,6,83	./.	0/0:7,0:6:13.28:0,13,155	0/0:9,0:6:18.02:0,18,229
chr10	74446534	.	GA	G	809.99	PASS	AB=0.860;AC=28;AF=0.500;AN=56;BaseQRankSum=1.593;DP=363;FS=0.000;HRun=16;HaplotypeScore=47.6825;InbreedingCoeff=0.2902;MQ=58.68;MQ0=8;MQRankSum=3.803;QD=3.75;ReadPosRankSum=1.439;VQSLOD=-0.4895;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,5:21:26.12:137,0,26	1/1:1,1:2:2.93:18,3,0	0/0:25,2:9:4.81:0,5,28	0/0:14,1:6:2.51:0,3,7	0/0:18,0:19:1.88:0,2,87	0/0:13,0:15:1.30:0,1,117	0/0:11,1:12:11.56:0,12,183	0/1:19,4:22:21.79:77,0,22	1/1:2,4:6:7.55:50,8,0	1/1:4,0:9:7.59:22,8,0	1/1:5,0:13:16.61:54,17,0	0/1:12,0:12:2.54:81,0,3	1/1:6,3:10:14.07:74,14,0	0/0:14,0:14:32.43:0,32,252	0/0:7,0:7:17.71:0,18,134	1/1:6,0:18:19.17:64,19,0	0/1:16,1:17:32.31:32,0,154	1/1:4,5:10:13.70:77,14,0	0/1:13,2:14:30.94:31,0,80	0/1:6,3:9:25.09:25,0,36	0/0:6,0:5:8.99:0,9,76	1/1:2,0:2:5.82:33,6,0	0/1:5,3:7:14.30:31,0,14	1/1:9,4:12:20.84:116,21,0	1/1:3,0:9:19.02:64,19,0	0/0:17,0:17:32.94:0,33,243	0/0:14,0:12:22.34:0,22,176	0/1:14,0:13:5.42:5,0,174
chr10	74446903	.	T	TA	11798.46	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-5.553;DP=655;FS=0.937;HRun=1;HaplotypeScore=68.3120;InbreedingCoeff=0.9977;MQ=86.50;MQ0=0;MQRankSum=-1.985;QD=44.19;ReadPosRankSum=0.225;VQSLOD=4.6943;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:42.24:892,42,0	0/0:11,0:11:33.11:0,33,461	0/0:18,0:18:48.14:0,48,652	0/0:29,0:29:81.04:0,81,1037	0/0:36,0:36:99:0,105,1443	0/0:32,0:32:90.28:0,90,1241	0/0:21,0:21:63.21:0,63,880	1/1:0,28:28:84.27:1318,84,0	1/1:0,16:16:45.15:720,45,0	1/1:1,26:27:75.26:1199,75,0	1/1:0,24:24:69.24:1103,69,0	1/1:0,18:18:51.17:815,51,0	1/1:2,20:22:15.23:821,15,0	0/0:29,0:29:87.29:0,87,1216	0/0:30,0:30:90.30:0,90,1250	1/1:0,28:28:81.28:1295,81,0	0/0:17,0:17:48.16:0,48,671	1/1:0,11:11:30.10:479,30,0	0/0:27,0:27:81.27:0,81,1132	0/0:29,0:29:78.25:0,78,1073	0/0:31,0:31:90.30:0,90,1258	1/1:0,23:23:63.21:1007,63,0	1/1:0,15:15:45.15:719,45,0	1/1:0,11:11:30.10:480,30,0	1/1:1,21:22:60.20:949,60,0	0/0:30,0:30:90.30:0,90,1259	0/0:33,0:33:96.32:0,96,1339	0/0:15,0:15:42.11:0,42,567
chr10	74448560	.	TTATG	T	3692.13	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=6.220;DP=811;FS=2.114;HRun=0;HaplotypeScore=139.9019;InbreedingCoeff=0.8499;MQ=65.79;MQ0=6;MQRankSum=-1.242;QD=12.91;ReadPosRankSum=0.332;VQSLOD=3.5173;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:34:12.48:113,12,0	0/0:13,0:13:21.04:0,21,444	0/0:24,0:19:0:0,0,1	0/0:26,0:22:3.01:0,3,45	0/0:37,0:37:57.20:0,57,1321	0/0:24,0:24:9.61:0,10,803	0/0:22,0:22:24.08:0,24,562	1/1:33,0:32:15.05:210,15,0	1/1:12,15:26:33.11:513,33,0	0/0:42,0:42:72.25:0,72,1635	0/1:20,0:20:10.99:11,0,517	1/1:21,23:44:60.20:934,60,0	1/1:22,15:37:42.06:624,42,0	0/0:38,0:38:60.19:0,60,1356	0/0:28,0:28:51.16:0,51,1139	0/0:39,0:39:63.20:0,63,1414	0/0:28,0:27:54.18:0,54,1180	1/1:9,5:13:12.04:187,12,0	0/0:20,0:21:15.05:0,15,251	0/0:14,0:32:51.16:0,51,829	0/0:13,0:21:15.05:0,15,262	1/1:13,10:23:30.02:428,30,0	1/1:19,6:25:18.01:252,18,0	1/1:18,11:28:27.09:420,27,0	0/0:30,0:30:57.20:0,57,1304	0/0:11,0:31:69.24:0,69,1257	0/0:15,0:36:42.14:0,42,731	0/0:26,0:26:39.13:0,39,854
chr10	74450042	.	T	TA	805.48	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-4.794;DP=292;FS=28.601;HRun=7;HaplotypeScore=37.3454;InbreedingCoeff=0.7293;MQ=77.79;MQ0=0;MQRankSum=-3.315;QD=20.65;ReadPosRankSum=-3.973;VQSLOD=0.9454;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:45.07:0,45,433	0/0:3,0:3:9.01:0,9,87	0/1:8,0:8:0.14:0,0,56	0/0:12,0:10:6.96:0,7,43	0/0:10,0:10:30.05:0,30,290	0/0:8,0:8:21.03:0,21,203	0/0:4,0:4:12.02:0,12,116	1/1:3,19:21:51.11:600,51,0	0/0:3,0:3:9.01:0,9,87	0/0:18,0:18:51.07:0,51,487	0/0:5,0:5:12.02:0,12,116	0/0:8,0:8:15.02:0,15,145	0/0:14,0:14:39.06:0,39,376	0/0:6,0:6:18.03:0,18,174	0/0:12,0:12:30.05:0,30,290	0/0:13,0:13:36.06:0,36,348	0/0:20,0:20:57.09:0,57,550	1/1:0,9:9:27.08:326,27,0	0/0:12,0:12:33.05:0,33,319	0/0:14,0:14:39.05:0,39,371	0/0:6,0:6:18.03:0,18,174	0/0:5,0:5:15.02:0,15,145	0/0:11,0:11:33.05:0,33,319	0/0:4,0:4:12.02:0,12,116	0/0:17,0:17:39.05:0,39,377	0/0:6,0:6:9.01:0,9,87	0/0:13,0:13:39.06:0,39,377	0/0:7,0:8:23.07:0,23,208
chr10	74450173	.	TATAC	T	468.01	PASS	AB=1.000;AC=10;AF=0.238;AN=42;BaseQRankSum=3.408;DP=114;FS=18.496;HRun=0;HaplotypeScore=23.3813;InbreedingCoeff=0.4723;MQ=42.22;MQ0=11;MQRankSum=-3.540;QD=14.63;ReadPosRankSum=-1.313;VQSLOD=0.9579;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:2.98:22,3,0	0/0:2,0:2:2.99:0,3,24	./.	./.	./.	0/0:4,0:3:12.04:0,12,313	0/0:2,0:2:6.02:0,6,120	1/1:5,10:11:29.97:422,30,0	0/0:1,0:1:2.04:0,2,6	0/1:2,0:2:1.44:27,0,1	./.	0/0:2,0:1:2.04:0,2,6	0/0:4,0:4:4.55:0,5,13	0/0:2,0:2:6.02:0,6,162	0/0:1,0:1:2.99:0,3,24	./.	0/0:14,0:13:31.33:0,31,750	1/1:2,0:2:5.99:77,6,0	0/0:10,0:7:18.04:0,18,304	0/0:5,0:5:15.03:0,15,297	0/0:5,0:4:12.04:0,12,257	./.	0/0:5,0:5:4.07:0,4,12	./.	1/1:6,1:7:5.65:44,6,0	0/1:5,0:5:3.94:4,0,276	0/0:5,0:5:15.05:0,15,340	0/0:5,0:2:6.02:0,6,162
chr10	74450189	.	CAT	C	92.46	PASS	AB=0.867;AC=10;AF=0.192;AN=52;BaseQRankSum=2.911;DP=206;FS=19.421;HRun=0;HaplotypeScore=45.2728;InbreedingCoeff=0.3605;MQ=43.73;MQ0=10;MQRankSum=0.088;QD=1.78;ReadPosRankSum=-2.641;VQSLOD=-0.5414;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:2.99:0,3,24	0/0:3,0:3:6.01:0,6,80	./.	./.	0/0:5,0:5:6:0,6,71	0/0:8,0:7:21.01:0,21,274	0/0:2,0:2:6.02:0,6,110	0/0:27,0:24:17.63:0,18,217	0/1:2,1:3:0.99:18,0,1	0/1:8,0:8:11.63:12,0,55	0/1:10,1:11:1.19:19,0,1	1/1:3,2:4:2.54:74,3,0	0/0:11,0:11:6.34:0,6,18	0/0:4,0:4:12.04:0,12,213	0/0:3,0:3:8.70:0,9,114	0/0:9,0:9:0.84:0,1,2	0/0:13,0:13:28.51:0,29,439	0/1:3,1:4:21.69:31,0,22	0/0:12,0:8:21.48:0,21,267	0/0:7,0:7:11.91:0,12,280	0/0:11,0:9:18.58:0,19,301	1/1:4,1:5:3.01:41,3,0	0/0:7,0:7:4.07:0,4,12	0/0:6,0:6:0:0,0,0	1/1:16,0:16:6.99:28,7,0	0/0:8,0:7:15.01:0,15,217	0/0:9,0:9:24.03:0,24,356	0/0:2,0:1:6:0,6,78
chr10	74450193	.	T	TACAC	1055.57	PASS	AB=0.843;AC=26;AF=0.520;AN=50;BaseQRankSum=4.352;DP=241;FS=0.907;HRun=0;HaplotypeScore=55.9306;InbreedingCoeff=0.4489;MQ=43.92;MQ0=11;MQRankSum=-5.625;QD=6.68;ReadPosRankSum=-4.471;VQSLOD=0.3789;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:4:2.96:19,3,0	0/0:4,0:4:6.02:0,6,93	./.	./.	0/0:8,0:8:9.03:0,9,139	0/0:8,0:7:2.46:0,2,155	0/1:5,0:5:9.93:10,0,147	1/1:32,0:29:47.58:401,48,0	1/1:2,1:3:3.01:71,3,0	1/1:10,0:10:25.71:155,26,0	1/1:13,0:13:3.01:48,3,0	1/1:5,1:5:9:191,9,0	0/1:5,6:11:0.44:0,0,1	0/0:5,0:5:15.05:0,15,232	0/0:3,0:4:12.02:0,12,145	1/1:9,0:9:3.85:11,4,0	0/0:14,0:14:26.97:0,27,401	1/1:5,0:5:3.01:63,3,0	0/1:12,0:10:4.43:4,0,52	0/1:8,0:9:1.05:1,0,199	0/0:11,0:9:15.04:0,15,216	1/1:6,0:6:6:89,6,0	./.	0/1:1,6:7:0:0,0,0	1/1:15,1:16:12.02:134,12,0	0/1:8,0:7:17.48:17,0,68	0/0:9,0:9:18.06:0,18,284	0/0:3,0:2:6.02:0,6,88
chr10	74450618	.	T	TA	1640.82	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.104;DP=776;FS=6.057;HRun=6;HaplotypeScore=73.4718;InbreedingCoeff=0.9986;MQ=68.00;MQ0=0;MQRankSum=-3.259;QD=29.83;ReadPosRankSum=-1.779;VQSLOD=3.6255;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.15:0,96,965	0/0:9,0:9:24.05:0,24,245	0/0:29,0:27:51.51:0,52,658	0/0:24,0:17:29.51:0,30,335	0/0:32,0:32:88.08:0,88,889	0/0:29,0:28:78.16:0,78,789	0/0:25,0:25:68.97:0,69,680	1/1:5,24:29:70.75:857,71,0	0/0:28,0:28:78.17:0,78,795	0/0:47,0:47:99:0,126,1258	0/0:23,0:23:63.14:0,63,641	0/0:26,0:26:75.13:0,75,746	0/0:40,0:40:86.69:0,87,1076	0/0:27,0:27:72.13:0,72,720	0/0:37,0:37:99:0,108,1095	0/0:26,0:26:69.16:0,69,704	0/0:28,0:28:78.18:0,78,794	1/1:2,24:26:72.23:905,72,0	0/0:22,0:22:57.13:0,57,582	0/0:30,0:30:90.20:0,90,918	0/0:18,0:18:48.05:0,48,467	0/0:17,0:17:48.11:0,48,490	0/0:23,0:23:66.14:0,66,670	0/0:27,0:27:57.08:0,57,565	0/0:23,0:23:60.10:0,60,597	0/0:36,0:36:99:0,99,1000	0/0:48,0:48:99:0,141,1438	0/0:14,0:14:42.10:0,42,428
chr10	74450672	.	GA	G	1562.11	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.485;DP=738;FS=3.952;HRun=7;HaplotypeScore=68.8659;InbreedingCoeff=0.9708;MQ=81.73;MQ0=0;MQRankSum=-1.055;QD=26.48;ReadPosRankSum=-4.662;VQSLOD=2.2365;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,1217	0/0:15,0:15:45.11:0,45,539	0/0:26,0:26:69.08:0,69,802	0/0:20,0:20:42.10:0,42,509	0/0:39,0:39:99:0,108,1334	0/0:26,0:25:72.23:0,72,906	0/0:19,0:19:51.13:0,51,613	1/1:2,40:42:99:1197,120,0	0/0:24,0:24:66.20:0,66,817	0/0:35,0:35:99:0,105,1301	0/0:21,0:21:60.19:0,60,750	0/0:25,0:25:69.19:0,69,841	0/0:32,0:32:90.24:0,90,1102	0/0:27,0:27:78.25:0,78,981	0/0:34,0:34:96.29:0,96,1184	0/0:27,0:27:78.24:0,78,969	0/0:24,0:24:72.23:0,72,905	1/1:0,17:17:48.11:487,48,0	0/0:19,0:19:45.14:0,45,566	0/0:29,0:29:84.27:0,84,1057	0/0:21,0:21:54.09:0,54,632	0/0:30,0:30:90.29:0,90,1132	0/0:22,0:22:60.19:0,60,751	0/0:18,0:18:54.16:0,54,666	0/0:22,0:22:63.20:0,63,793	0/0:33,0:33:87.27:0,87,1083	0/0:52,0:52:99:0,132,1647	0/0:3,0:3:9.03:0,9,113
chr10	74453676	.	T	TA	5848.07	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-13.374;DP=571;FS=10.493;HRun=10;HaplotypeScore=58.5454;InbreedingCoeff=0.9863;MQ=65.80;MQ0=0;MQRankSum=-1.896;QD=24.47;ReadPosRankSum=2.215;VQSLOD=5.1142;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:29:63.16:672,63,0	0/0:12,0:12:35.92:0,36,288	0/0:13,0:13:29.54:0,30,230	0/0:8,0:8:14:0,14,103	0/0:29,0:29:77.87:0,78,634	0/0:24,1:25:29.50:0,29,438	0/0:13,0:13:29.96:0,30,246	0/0:21,0:21:53.94:0,54,443	1/1:2,21:23:60.12:629,60,0	1/1:2,21:23:60.15:639,60,0	1/1:3,25:28:66.17:703,66,0	1/1:2,15:17:23.49:455,23,0	1/1:4,24:28:66.17:704,66,0	0/0:18,0:19:46.97:0,47,375	0/0:20,0:20:41.92:0,42,342	1/1:5,20:26:53.97:558,54,0	0/0:24,0:24:65.91:0,66,542	0/0:17,0:17:47.88:0,48,388	0/0:13,0:13:32.96:0,33,271	0/0:28,0:28:68.90:0,69,566	0/0:12,0:12:9.61:0,10,219	1/1:1,8:9:24.02:244,24,0	1/1:3,16:20:17.29:374,17,0	1/1:1,7:8:18.05:192,18,0	1/1:2,26:28:44.53:679,45,0	0/0:29,0:29:62.88:0,63,515	0/0:27,0:28:70.91:0,71,568	0/0:20,0:20:50.93:0,51,418
chr10	74455470	.	G	GT	1929.20	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.000;DP=453;FS=4.330;HRun=1;HaplotypeScore=47.0740;InbreedingCoeff=0.9668;MQ=83.56;MQ0=0;MQRankSum=-3.556;QD=37.10;ReadPosRankSum=-3.083;VQSLOD=2.5197;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.24:0,78,996	0/0:7,0:7:21.07:0,21,273	0/0:15,0:15:45.12:0,45,549	0/0:11,0:11:30.09:0,30,374	0/0:18,0:18:54.15:0,54,685	0/0:14,0:14:42.12:0,42,531	0/0:15,0:15:45.13:0,45,570	1/1:2,23:25:72.22:1041,72,0	0/0:11,0:11:30.10:0,30,389	0/0:23,0:23:66.21:0,66,857	0/0:15,0:15:45.15:0,45,584	0/0:12,0:12:36.12:0,36,467	0/0:13,0:13:39.13:0,39,504	0/0:19,0:19:54.16:0,54,700	0/0:17,0:17:51.17:0,51,662	0/0:12,0:12:36.12:0,36,468	0/0:21,0:21:63.20:0,63,818	1/1:1,26:27:69.20:1010,69,0	0/0:12,0:12:33.11:0,33,429	0/0:15,0:15:42.14:0,42,545	0/0:18,0:18:48.16:0,48,623	0/0:11,0:11:33.11:0,33,429	0/0:8,0:8:24.08:0,24,312	0/0:12,0:12:36.12:0,36,466	0/0:16,0:16:48.16:0,48,623	0/0:30,0:30:87.28:0,87,1130	0/0:26,0:26:75.24:0,75,974	0/0:3,0:3:9.03:0,9,116
chr10	74456373	.	GT	G	2239.31	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.745;DP=677;FS=5.464;HRun=2;HaplotypeScore=65.8331;InbreedingCoeff=0.9955;MQ=79.97;MQ0=0;MQRankSum=-1.458;QD=36.12;ReadPosRankSum=-3.495;VQSLOD=2.6072;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:52.93:0,53,807	0/0:6,0:6:18.05:0,18,250	0/0:16,0:16:29.09:0,29,533	0/0:17,0:17:45.10:0,45,600	0/0:26,0:26:78.26:0,78,1167	0/0:26,0:26:75.25:0,75,1124	0/0:24,0:24:66.21:0,66,970	1/1:0,43:43:99:1661,129,0	0/0:23,0:23:69.23:0,69,1016	0/0:27,0:27:78.25:0,78,1134	0/0:18,0:18:54.18:0,54,809	0/0:15,0:15:45.15:0,45,674	0/0:39,0:39:99:0,114,1703	0/0:38,0:38:99:0,111,1594	0/0:29,0:28:81.27:0,81,1207	0/0:27,0:27:78.26:0,78,1169	0/0:30,0:30:87.28:0,87,1283	1/1:0,19:19:54.18:700,54,0	0/0:24,0:24:72.23:0,72,1044	0/0:26,0:26:78.26:0,78,1167	0/0:18,0:18:54.18:0,54,809	0/0:18,0:18:48.16:0,48,719	0/0:28,0:28:81.23:0,81,1178	0/0:18,0:18:51.13:0,51,734	0/0:21,0:21:60.20:0,60,898	0/0:26,0:26:78.26:0,78,1152	0/0:37,0:36:99:0,102,1485	0/0:16,0:16:48.15:0,48,698
chr10	74458457	.	GCA	G	4727.53	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.667;DP=560;FS=6.269;HRun=0;HaplotypeScore=74.1091;InbreedingCoeff=0.9984;MQ=82.11;MQ0=1;MQRankSum=-1.930;QD=37.22;ReadPosRankSum=2.619;VQSLOD=7.0150;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.67:0,58,1037	0/0:8,0:8:24.08:0,24,450	0/0:15,0:15:19.97:0,20,698	0/0:19,0:19:42.19:0,42,890	0/0:30,0:30:84.27:0,84,1533	0/0:16,0:16:42.14:0,42,768	0/0:15,0:15:45.14:0,45,811	0/0:32,0:32:90.17:0,90,906	1/1:0,17:17:45.15:663,45,0	0/0:15,0:15:42.14:0,42,758	0/0:21,0:21:60.21:0,60,1118	1/1:2,15:16:42.14:618,42,0	1/1:2,24:26:69.23:1016,69,0	0/0:22,0:22:66.23:0,66,1222	0/0:23,0:23:66.23:0,66,1236	0/0:19,0:19:54.19:0,54,1005	0/0:23,0:23:69.24:0,69,1283	0/0:21,0:21:57.15:0,57,642	0/0:17,0:17:42.14:0,42,760	0/0:23,0:23:69.24:0,69,1282	0/0:11,0:11:33.11:0,33,618	1/1:1,30:31:78.26:1149,78,0	1/1:0,18:18:45.15:663,45,0	1/1:2,16:18:42.14:619,42,0	0/0:28,0:28:84.29:0,84,1573	0/0:14,0:14:42.14:0,42,779	0/0:26,0:26:72.25:0,72,1348	0/0:14,0:14:42.14:0,42,786
chr10	74459906	.	TAC	T	1878.81	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.584;DP=693;FS=1.225;HRun=0;HaplotypeScore=79.1568;InbreedingCoeff=0.9979;MQ=92.49;MQ0=0;MQRankSum=-0.311;QD=38.34;ReadPosRankSum=-2.238;VQSLOD=4.8842;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.26:0,75,1448	0/0:8,0:8:24.08:0,24,454	0/0:31,0:31:87.21:0,87,1543	0/0:27,0:27:78.24:0,78,1420	0/0:31,0:31:84.27:0,84,1551	0/0:23,0:23:69.22:0,69,1298	0/0:16,0:16:48.15:0,48,883	1/1:2,32:34:96.29:1403,96,0	0/0:20,0:20:57.20:0,57,1090	0/0:30,0:30:90.30:0,90,1709	0/0:18,0:18:54.16:0,54,1007	0/0:23,0:23:69.24:0,69,1323	0/0:24,0:24:69.24:0,69,1332	0/0:20,0:20:57.18:0,57,1062	0/0:50,0:50:99:0,151,2896	0/0:31,0:31:93.30:0,93,1762	0/0:32,0:32:96.33:0,96,1830	1/1:0,15:15:39.13:597,39,0	0/0:20,0:20:60.21:0,60,1158	0/0:33,0:33:96.33:0,96,1814	0/0:17,0:17:51.17:0,51,985	0/0:23,0:23:69.20:0,69,1240	0/0:17,0:17:51.16:0,51,950	0/0:26,0:26:78.25:0,78,1471	0/0:22,0:22:66.20:0,66,1240	0/0:33,0:33:93.32:0,93,1736	0/0:35,0:35:99:0,105,2026	0/0:8,0:8:24.08:0,24,463
chr10	74460792	.	G	GA	3564.81	PASS	AB=1.000;AC=52;AF=0.929;AN=56;BaseQRankSum=-2.732;DP=238;FS=0.000;HRun=9;HaplotypeScore=34.1282;InbreedingCoeff=0.2831;MQ=79.88;MQ0=2;MQRankSum=-2.103;QD=15.70;ReadPosRankSum=1.614;VQSLOD=2.8929;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:2:5.80:33,6,0	1/1:0,1:1:3.01:33,3,0	0/1:8,0:7:12.13:12,0,18	0/0:10,0:9:8.51:0,9,60	1/1:4,9:13:15:153,15,0	1/1:3,10:14:32.92:346,33,0	1/1:1,3:4:6.02:66,6,0	1/1:37,0:37:78.91:568,79,0	1/1:2,3:6:11.87:113,12,0	1/1:3,0:10:13.03:101,13,0	1/1:7,0:7:5.88:35,6,0	1/1:4,0:4:6.01:60,6,0	1/1:1,2:3:3.01:33,3,0	1/1:1,7:8:15.04:166,15,0	1/1:2,7:9:12.03:133,12,0	1/1:4,0:10:9.43:59,9,0	1/1:0,13:13:30.08:332,30,0	1/1:9,0:9:14.69:88,15,0	1/1:2,5:6:12.03:133,12,0	1/1:1,4:5:9.02:100,9,0	1/1:3,5:8:12.03:133,12,0	0/1:4,0:4:0:0,0,0	1/1:1,4:5:6.02:66,6,0	1/1:0,1:1:3.01:33,3,0	1/1:2,0:5:2.88:15,3,0	1/1:6,5:11:30.07:325,30,0	1/1:2,12:14:18.05:199,18,0	1/1:1,7:8:21.06:232,21,0
chr10	74460800	.	A	AAAT	2442.89	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-7.263;DP=216;FS=3.880;HRun=0;HaplotypeScore=43.7219;InbreedingCoeff=0.3375;MQ=81.56;MQ0=2;MQRankSum=-1.166;QD=21.06;ReadPosRankSum=-3.251;VQSLOD=1.9536;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:2,0:2:13.71:26,0,14	0/0:2,0:2:4.54:0,5,26	0/0:6,0:5:2.56:0,3,55	0/0:14,0:11:16.21:0,16,120	0/0:10,0:10:9.17:0,9,41	0/0:12,0:12:8.17:0,8,47	0/1:4,0:4:1.34:15,0,1	1/1:3,31:37:91.33:1701,91,0	0/1:4,0:4:0.40:0,0,5	0/1:9,0:9:38.54:92,0,39	1/1:0,5:5:6.02:131,6,0	1/1:4,0:4:6.01:60,6,0	0/0:2,0:2:1.55:0,2,4	0/1:7,0:7:1.48:9,0,1	0/0:7,0:7:6.22:0,6,15	1/1:9,0:9:9.95:139,10,0	0/1:14,0:14:13.49:13,0,39	1/1:0,7:7:15.05:328,15,0	0/0:6,0:5:9.20:0,9,37	0/0:6,0:6:10.65:0,11,62	0/0:5,0:5:6.22:0,6,15	0/0:1,0:1:2.97:0,3,20	0/0:5,0:5:3.10:0,3,8	0/0:1,0:1:1.55:0,2,4	1/1:4,0:3:3.01:31,3,0	0/1:10,0:10:4.51:57,0,5	0/0:15,0:15:18.29:0,18,93	0/0:8,0:8:8.04:0,8,20
chr10	74460963	.	C	CTA	3002.94	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-9.737;DP=415;FS=5.069;HRun=0;HaplotypeScore=47.1699;InbreedingCoeff=0.9887;MQ=81.62;MQ0=0;MQRankSum=-4.689;QD=42.29;ReadPosRankSum=1.664;VQSLOD=4.7843;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:48.16:831,48,0	0/0:7,0:7:21.07:0,21,279	0/0:15,0:15:33.11:0,33,429	0/0:14,0:14:24.06:0,24,307	0/0:21,0:21:60.20:0,60,797	0/0:13,0:13:33.11:0,33,439	0/0:15,0:15:42.14:0,42,559	0/0:52,0:52:99:0,126,1651	1/1:1,7:8:21.07:346,21,0	0/0:17,0:17:48.16:0,48,639	0/0:13,0:13:36.12:0,36,480	1/1:1,9:10:27.09:468,27,0	1/1:1,7:9:20.93:361,21,0	0/0:13,0:13:36.12:0,36,480	0/0:9,0:9:27.09:0,27,360	0/0:15,0:15:42.14:0,42,559	0/0:28,0:28:78.26:0,78,1039	0/0:19,0:19:57.14:0,57,739	0/0:16,0:16:36.12:0,36,478	0/0:10,0:10:30.10:0,30,399	0/0:10,0:10:27.09:0,27,359	1/1:0,7:7:18.06:312,18,0	1/1:1,11:12:30.10:520,30,0	1/1:0,7:7:21.07:364,21,0	0/0:15,0:15:45.15:0,45,599	0/0:16,0:16:45.15:0,45,599	0/0:22,0:22:63.17:0,63,805	0/0:4,0:4:12.04:0,12,160
chr10	74461573	.	G	GGCTTCCC	5918.28	PASS	AB=0.710;AC=11;AF=0.196;AN=56;BaseQRankSum=9.670;DP=737;FS=0.000;HRun=0;HaplotypeScore=229.5232;InbreedingCoeff=-0.2476;MQ=91.76;MQ0=0;MQRankSum=-10.640;QD=24.36;ReadPosRankSum=5.951;VQSLOD=3.9701;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,11:25:99:476,0,728	0/0:15,0:15:45.15:0,45,1258	0/0:32,0:32:87.29:0,87,2117	0/0:38,0:39:96.09:0,96,2715	0/0:36,0:36:99:0,105,2884	0/0:21,0:20:63.17:0,63,1688	0/0:31,0:31:87.28:0,87,2304	0/0:38,0:38:99:0,108,2605	0/1:13,12:25:99:928,0,424	0/1:15,13:28:99:1232,0,694	0/1:8,8:16:99:284,0,446	0/1:13,10:23:99:699,0,540	0/1:14,8:23:99:733,0,286	0/0:34,0:34:99:0,102,2695	0/0:39,0:39:99:0,117,3128	0/1:13,11:24:99:538,0,564	0/0:34,0:34:96.31:0,96,2569	0/0:23,0:22:66.23:0,66,1823	0/0:16,0:16:48.12:0,48,1120	0/0:25,0:25:72.22:0,72,1886	0/0:39,0:39:99:0,114,3128	0/1:15,7:22:99:243,0,517	0/1:9,8:17:99:322,0,390	0/1:9,2:11:99:174,0,239	0/1:17,12:29:99:290,0,773	0/0:36,0:35:99:0,105,2866	0/0:33,0:33:96.24:0,96,2331	0/0:3,0:3:8.98:0,9,129
chr10	74461574	.	A	AGCAGAGGG	7433.10	PASS	AB=0.711;AC=12;AF=0.214;AN=56;BaseQRankSum=8.945;DP=728;FS=2.545;HRun=0;HaplotypeScore=234.3952;InbreedingCoeff=-0.0663;MQ=91.62;MQ0=0;MQRankSum=-13.508;QD=30.84;ReadPosRankSum=0.764;VQSLOD=4.2590;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,11:25:99:511,0,167	0/0:15,0:15:45.15:0,45,1361	0/0:31,0:31:73.51:0,74,1889	0/0:38,0:39:86.50:0,86,2752	0/0:36,0:36:99:0,105,2794	0/0:21,0:20:63.15:0,63,1663	0/0:31,0:31:90.22:0,90,2278	0/0:37,0:37:99:0,102,2462	0/1:12,12:24:84.58:968,0,85	1/1:15,13:28:40.74:1536,41,0	0/1:8,8:16:99:394,0,147	0/1:13,10:23:99:727,0,135	0/1:14,9:23:17.92:941,0,18	0/0:34,0:34:99:0,102,2790	0/0:38,0:38:99:0,114,3121	0/1:13,11:24:91.70:802,0,92	0/0:34,0:34:99:0,99,2438	0/0:23,0:22:66.20:0,66,1924	0/0:15,0:15:45.11:0,45,1100	0/0:26,0:26:72.14:0,72,1704	0/0:39,0:39:99:0,114,3203	0/1:15,7:22:74.13:389,0,74	0/1:9,8:17:99:356,0,119	0/1:9,2:11:79.94:269,0,80	0/1:16,12:28:99:540,0,246	0/0:35,0:35:99:0,101,2875	0/0:30,0:30:90.24:0,90,2369	0/0:3,0:3:5.99:0,6,113
chr10	74462804	.	G	GA	1253.39	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.072;DP=672;FS=1.152;HRun=9;HaplotypeScore=67.2148;InbreedingCoeff=0.9314;MQ=72.04;MQ0=0;MQRankSum=-2.862;QD=20.55;ReadPosRankSum=-5.615;VQSLOD=1.7408;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:77.95:0,78,672	0/0:15,0:15:35.96:0,36,312	0/0:17,0:16:4.43:0,4,231	0/0:16,0:16:26.82:0,27,215	0/0:32,0:32:65.61:0,66,731	0/0:23,0:23:62.92:0,63,533	0/0:23,1:24:26.78:0,27,457	1/1:4,33:37:85.95:977,86,0	0/0:13,0:13:35.99:0,36,313	0/0:40,0:40:99:0,103,908	0/0:26,0:26:36.49:0,36,471	0/0:21,0:21:47.98:0,48,416	0/0:22,0:22:65.99:0,66,572	0/0:22,0:22:59.96:0,60,515	0/0:23,0:23:65.97:0,66,569	0/0:19,0:19:50.97:0,51,443	0/0:31,1:32:41.80:0,42,592	1/1:6,18:24:36.10:398,36,0	0/0:26,0:26:71.97:0,72,621	0/0:37,0:37:99:0,105,908	0/0:19,0:19:44.92:0,45,375	0/0:20,0:20:39.86:0,40,361	0/0:25,0:25:62.98:0,63,547	0/0:21,0:21:53.99:0,54,469	0/0:28,0:28:62.96:0,63,547	0/0:24,0:24:59.96:0,60,518	0/0:19,0:19:56.97:0,57,491	0/0:17,0:17:50.99:0,51,443
chr10	74463273	.	TGAAA	T	1656.56	PASS	AB=1.000;AC=34;AF=0.654;AN=52;BaseQRankSum=-3.847;DP=411;FS=2.219;HRun=0;HaplotypeScore=79.9394;InbreedingCoeff=0.5474;MQ=69.98;MQ0=5;MQRankSum=2.475;QD=6.73;ReadPosRankSum=3.346;VQSLOD=1.1831;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:2.94:18,3,0	1/1:4,0:4:2.96:19,3,0	./.	./.	0/0:15,0:15:17.97:0,18,213	1/1:8,0:8:3:25,3,0	0/1:18,0:18:15.99:16,0,36	0/0:22,0:23:1.25:0,1,3	1/1:16,0:16:20.81:153,21,0	0/0:18,0:18:20.72:0,21,167	0/0:15,0:15:2.97:0,3,20	0/0:8,0:8:15.03:0,15,181	1/1:22,0:22:25.92:185,26,0	1/1:21,0:21:24.04:302,24,0	1/1:15,0:15:15.01:165,15,0	0/0:21,0:20:6.01:0,6,65	1/1:24,0:24:20.94:199,21,0	0/1:11,0:11:11.01:11,0,17	1/1:5,0:5:3:26,3,0	1/1:8,6:14:2.03:37,2,0	1/1:12,0:12:15:145,15,0	0/0:21,0:19:14.96:0,15,130	1/1:14,0:14:26.76:197,27,0	1/1:17,0:17:5.01:34,5,0	0/0:17,0:15:8.88:0,9,72	1/1:11,0:11:9.01:96,9,0	1/1:19,0:19:14.95:157,15,0	1/1:4,0:4:3.01:44,3,0
chr10	74463324	.	AAGAGAGAGAGAGAG	A	2762.03	PASS	AB=1.000;AC=19;AF=0.380;AN=50;BaseQRankSum=2.047;DP=293;FS=27.676;HRun=0;HaplotypeScore=117.1085;InbreedingCoeff=0.4367;MQ=43.26;MQ0=19;MQRankSum=-3.162;QD=19.45;ReadPosRankSum=-0.178;VQSLOD=0.7425;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:12:99:316,0,135	0/0:3,0:2:2.38:0,2,37	./.	./.	0/0:16,0:15:36.12:0,36,1159	0/0:10,0:10:18.06:0,18,722	0/0:19,0:17:33.10:0,33,867	0/1:10,0:9:10.61:11,0,31	0/1:10,0:10:83.13:180,0,83	1/1:17,0:15:25.48:430,25,0	./.	0/1:6,0:6:81.76:258,0,82	1/1:22,0:20:26.30:528,26,0	0/0:13,0:13:25.33:0,25,781	0/0:8,0:8:15.02:0,15,218	1/1:9,0:6:12.04:232,12,0	0/0:18,0:17:27.08:0,27,736	1/1:2,0:2:3.01:52,3,0	0/0:7,0:6:12.04:0,12,431	0/0:14,0:14:27.05:0,27,826	0/0:10,0:9:15.05:0,15,437	1/1:8,5:11:4.64:112,5,0	0/1:12,0:12:54.81:333,0,55	1/1:10,0:9:6.02:108,6,0	1/1:18,0:16:23.99:378,24,0	0/0:11,0:9:24.07:0,24,700	0/0:12,0:13:29.63:0,30,778	0/0:4,0:2:3.01:0,3,52
chr10	74463338	.	G	GAA	1929.26	PASS	AC=22;AF=0.440;AN=50;BaseQRankSum=5.877;DP=256;FS=24.228;HRun=1;HaplotypeScore=61.2729;InbreedingCoeff=0.8397;MQ=39.00;MQ0=18;MQRankSum=-3.682;QD=17.54;ReadPosRankSum=0.054;VQSLOD=-0.4810;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,1:11:6.86:200,7,0	0/0:3,0:2:2.66:0,3,18	./.	./.	0/0:13,0:12:36.11:0,36,505	0/0:10,0:10:23.61:0,24,273	0/0:23,0:21:33.42:0,33,443	0/0:12,0:11:27.98:0,28,162	1/1:5,2:7:7.97:163,8,0	1/1:16,0:14:35.73:369,36,0	./.	1/1:5,1:6:8.58:149,9,0	1/1:7,9:14:24.07:383,24,0	0/0:11,0:11:21.88:0,22,394	0/0:7,0:7:14.51:0,15,140	1/1:8,0:5:12.04:164,12,0	0/0:15,0:14:32.51:0,33,414	1/1:2,0:2:1.96:26,2,0	0/0:6,0:5:14.97:0,15,177	0/0:12,0:11:25.27:0,25,330	0/0:7,0:6:15.04:0,15,202	1/1:9,0:7:8.57:85,9,0	1/1:6,2:8:12.89:204,13,0	1/1:11,0:10:8.96:74,9,0	1/1:15,0:13:24.07:305,24,0	0/0:11,0:9:24.06:0,24,327	0/0:11,0:11:29.79:0,30,370	0/0:3,0:1:3.01:0,3,30
chr10	74466412	.	CA	C	1157.88	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.793;DP=449;FS=0.606;HRun=6;HaplotypeScore=40.4881;InbreedingCoeff=0.9288;MQ=80.11;MQ0=0;MQRankSum=-0.543;QD=26.32;ReadPosRankSum=-3.704;VQSLOD=1.6863;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:48.16:0,48,632	0/0:2,0:2:6.01:0,6,66	0/0:9,0:9:18.06:0,18,233	0/0:13,0:13:23.83:0,24,320	0/0:19,0:19:51.16:0,51,658	0/0:21,0:21:60.15:0,60,770	0/0:18,0:18:45.14:0,45,578	1/1:3,29:32:87.19:925,87,0	0/0:19,0:19:54.18:0,54,709	0/0:20,0:20:51.16:0,51,660	0/0:26,0:26:78.24:0,78,1010	0/0:15,0:15:42.14:0,42,553	0/0:9,0:9:24.08:0,24,316	0/0:16,0:16:39.13:0,39,511	0/0:14,0:14:33.09:0,33,419	0/0:16,0:16:42.14:0,42,553	0/0:19,0:19:54.18:0,54,710	1/1:0,12:12:33.08:355,33,0	0/0:22,0:22:63.20:0,63,829	0/0:18,0:18:51.15:0,51,656	0/0:11,0:11:30.10:0,30,395	0/0:5,0:5:15.05:0,15,197	0/0:7,0:7:21.07:0,21,276	0/0:9,0:9:27.08:0,27,341	0/0:18,0:18:51.17:0,51,671	0/0:33,0:33:90.29:0,90,1184	0/0:21,0:21:60.18:0,60,774	0/0:6,0:6:18.06:0,18,237
chr10	74466602	.	A	AT	507.37	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.869;DP=435;FS=0.880;HRun=1;HaplotypeScore=67.1183;InbreedingCoeff=0.8254;MQ=67.05;MQ0=5;MQRankSum=0.980;QD=14.92;ReadPosRankSum=-1.671;VQSLOD=2.7053;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:35.60:0,36,207	0/0:3,0:3:9.01:0,9,90	0/0:32,0:9:7.30:0,7,92	0/0:13,0:7:7.59:0,8,85	0/0:21,0:25:53.84:0,54,445	0/0:7,0:7:14.73:0,15,111	0/0:6,0:6:13.23:0,13,102	1/1:4,21:25:46.33:509,46,0	0/0:20,0:21:39.81:0,40,254	0/0:14,0:14:26.79:0,27,226	0/0:21,0:21:32.32:0,32,221	0/0:13,0:13:23.78:0,24,154	0/0:19,0:19:38.26:0,38,249	0/0:12,0:12:26.91:0,27,215	0/0:14,0:14:20.99:0,21,177	0/0:18,0:18:20.02:0,20,158	0/0:12,0:12:26.80:0,27,214	1/1:9,0:9:11.08:114,11,0	0/0:21,0:22:51.02:0,51,478	0/0:17,0:19:41.97:0,42,353	0/0:13,0:13:14.86:0,15,113	0/0:6,0:6:13.06:0,13,85	0/0:13,0:13:24.55:0,25,171	0/0:11,0:11:21.21:0,21,134	0/0:11,0:10:12.86:0,13,91	0/0:19,0:19:44.99:0,45,396	0/0:16,0:16:32.95:0,33,270	0/0:17,0:17:43.43:0,43,340
chr10	74467731	.	CT	C	521.24	PASS	AB=0.785;AC=14;AF=0.250;AN=56;BaseQRankSum=1.350;DP=516;FS=5.990;HRun=15;HaplotypeScore=70.2408;InbreedingCoeff=0.2237;MQ=72.01;MQ0=5;MQRankSum=1.872;QD=2.85;ReadPosRankSum=3.185;VQSLOD=-0.3322;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,3:32:22.37:0,22,206	0/0:11,0:11:2.41:0,2,133	0/0:35,0:18:7.65:0,8,90	0/0:28,0:18:19:0,19,189	0/1:26,2:29:7.10:7,0,279	0/1:12,3:16:6.15:6,0,180	0/0:12,1:15:13.25:0,13,208	0/0:37,0:36:53.77:0,54,437	0/1:5,15:21:38.63:153,0,39	0/0:9,0:16:20.26:0,20,120	0/0:5,0:14:29.24:0,29,186	1/1:3,9:13:25.20:149,25,0	0/1:4,9:15:3.69:94,0,4	0/0:12,2:15:1.15:0,1,224	0/1:17,1:19:28.86:29,0,124	0/0:2,0:11:11.36:0,11,57	0/0:15,1:15:29.94:0,30,250	0/0:23,0:23:43.39:0,43,331	0/0:19,0:18:38.89:0,39,326	0/1:13,0:14:2.31:2,0,112	0/0:4,0:4:5.92:0,6,44	0/1:8,6:15:10.19:65,0,10	1/1:6,7:14:16.72:102,17,0	1/1:7,4:12:10.86:64,11,0	0/0:7,0:13:14.51:0,15,92	0/0:21,0:22:31.99:0,32,296	0/0:19,2:21:1.93:0,2,240	0/1:11,4:15:8.68:9,0,162
chr10	74468863	.	T	TTTG	140.16	PASS	AB=0.865;AC=2;AF=0.036;AN=56;BaseQRankSum=2.584;DP=515;FS=1.882;HRun=0;HaplotypeScore=78.9824;InbreedingCoeff=-0.0514;MQ=51.61;MQ0=49;MQRankSum=1.361;QD=2.38;ReadPosRankSum=2.004;VQSLOD=1.6041;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:34:64.77:0,65,431	0/0:10,0:10:29.85:0,30,259	0/0:21,0:6:16.13:0,16,100	0/0:15,0:7:5.07:0,5,46	0/0:16,0:15:36.43:0,36,246	0/0:23,0:20:53.72:0,54,448	0/0:26,0:23:67.91:0,68,584	0/1:24,12:29:78.99:191,0,79	0/0:14,0:13:12.71:0,13,149	0/0:16,0:12:35.18:0,35,242	0/0:16,0:14:35.79:0,36,296	0/0:13,0:13:30.35:0,30,201	0/0:10,0:7:12.59:0,13,75	0/0:11,0:10:26:0,26,222	0/0:15,0:15:37.12:0,37,347	0/0:12,0:9:23.82:0,24,191	0/0:33,0:28:55.49:0,55,490	0/1:21,0:17:38.01:38,0,39	0/0:24,0:19:48.91:0,49,398	0/0:20,0:17:41.71:0,42,350	0/0:9,0:6:9.41:0,9,67	0/0:13,0:11:23.64:0,24,168	0/0:16,0:12:20.97:0,21,160	0/0:13,0:11:14.38:0,14,97	0/0:18,0:17:35.72:0,36,301	0/0:21,0:19:53.58:0,54,420	0/0:16,0:13:41.55:0,42,374	0/0:15,0:9:5.57:0,6,58
chr10	74470893	.	GCACA	G	1022.32	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-0.165;DP=630;FS=7.369;HRun=0;HaplotypeScore=136.7669;InbreedingCoeff=0.7748;MQ=57.07;MQ0=20;MQRankSum=-4.530;QD=16.76;ReadPosRankSum=-0.878;VQSLOD=2.4825;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:22:26.53:0,27,140	0/0:11,0:11:19.42:0,19,419	0/0:43,0:22:48.06:0,48,798	0/0:40,0:16:19.20:0,19,622	0/0:22,0:22:45.15:0,45,1041	0/0:13,0:11:24.08:0,24,406	0/0:30,0:28:54.19:0,54,1308	1/1:10,10:17:33.10:516,33,0	0/0:24,0:20:41.74:0,42,227	0/0:21,0:22:21.90:0,22,192	0/0:7,0:10:16.60:0,17,91	0/1:16,0:15:8.93:9,0,125	0/0:35,0:34:45.25:0,45,352	0/0:14,0:14:27.07:0,27,608	0/0:18,0:18:30.10:0,30,712	0/0:12,0:10:17.07:0,17,83	0/0:26,0:26:49.65:0,50,1240	1/1:14,11:21:32.57:624,33,0	0/0:18,0:16:42.14:0,42,849	0/0:11,0:11:27.55:0,28,600	0/0:57,0:51:72.25:0,72,1701	0/0:24,0:25:41.29:0,41,276	0/0:18,0:18:31.24:0,31,115	0/0:28,0:26:48.46:0,48,309	0/0:9,0:11:12.90:0,13,50	0/0:24,0:22:21.07:0,21,910	0/0:14,0:14:33.11:0,33,822	0/0:9,0:9:24.08:0,24,486
chr10	74470947	.	CCACA	C	2200.46	PASS	AB=0.932;AC=23;AF=0.426;AN=54;BaseQRankSum=0.500;DP=777;FS=12.120;HRun=0;HaplotypeScore=119.3939;InbreedingCoeff=0.2949;MQ=35.77;MQ0=140;MQRankSum=-2.999;QD=5.50;ReadPosRankSum=0.362;VQSLOD=1.9227;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,2:15:14.96:182,15,0	0/0:12,0:10:9.35:0,9,196	0/0:31,0:2:3.01:0,3,59	0/0:41,0:5:11.99:0,12,168	./.	0/0:23,0:17:22.72:0,23,425	0/0:47,0:32:32.82:0,33,592	0/1:28,7:20:99:324,0,119	0/1:28,5:17:41.26:189,0,41	0/1:32,3:23:29.58:251,0,30	1/1:14,4:13:2.48:46,2,0	1/1:20,12:22:17.97:266,18,0	1/1:21,3:16:17.91:262,18,0	0/0:19,0:13:15.05:0,15,348	0/1:18,0:13:5.24:5,0,241	1/1:23,1:15:20.93:324,21,0	0/0:36,0:32:42.61:0,43,796	0/1:26,0:19:29.79:30,0,59	0/0:22,0:15:20.75:0,21,343	0/0:9,0:7:5.91:0,6,96	0/0:106,0:87:99:0,107,2201	0/1:17,3:17:0:0,0,0	0/1:8,1:8:53.82:90,0,54	1/1:36,1:27:21.07:333,21,0	1/1:16,2:7:3.01:49,3,0	0/1:38,0:26:1.77:2,0,363	0/0:13,0:12:18.02:0,18,316	0/1:8,0:7:25.41:25,0,206
chr10	74470993	.	ACACACAT	A	1065.37	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=2.789;DP=542;FS=0.771;HRun=0;HaplotypeScore=121.9317;InbreedingCoeff=0.4784;MQ=45.71;MQ0=48;MQRankSum=-5.875;QD=8.73;ReadPosRankSum=-2.654;VQSLOD=1.8637;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:29.81:0,30,691	0/0:3,0:3:6.02:0,6,230	0/1:54,0:3:11.64:12,0,85	0/0:70,0:10:16.51:0,17,181	0/0:10,0:10:27.09:0,27,1000	0/0:13,0:12:24.08:0,24,719	0/0:24,0:23:60.20:0,60,1726	1/1:4,13:17:39.13:713,39,0	0/0:15,0:13:29.57:0,30,681	0/0:12,0:11:18.06:0,18,518	0/0:16,0:16:26.66:0,27,718	0/1:21,0:20:2.59:3,0,633	0/0:11,0:11:25.59:0,26,577	0/0:9,0:8:24.08:0,24,803	0/0:13,0:13:30.10:0,30,1007	0/1:16,0:15:13.48:13,0,693	0/0:22,0:20:48.06:0,48,1290	1/1:6,8:12:23.29:459,23,0	0/0:24,0:17:42.14:0,42,1077	0/0:4,0:4:12.04:0,12,335	0/0:83,0:74:99:0,126,3896	0/0:8,0:8:5.92:0,6,210	0/0:7,0:6:12.04:0,12,211	0/0:25,0:22:38.80:0,39,1030	0/0:7,0:4:9.03:0,9,190	0/0:9,0:8:18.01:0,18,465	0/0:4,0:4:12.04:0,12,347	0/0:7,0:7:21.07:0,21,705
chr10	74470999	.	AT	A	274.47	PASS	AB=0.974;AC=6;AF=0.107;AN=56;BaseQRankSum=4.929;DP=537;FS=0.000;HRun=1;HaplotypeScore=87.9032;InbreedingCoeff=0.5513;MQ=45.63;MQ0=49;MQRankSum=-4.288;QD=5.08;ReadPosRankSum=-0.963;VQSLOD=-0.0621;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:29.59:0,30,303	0/0:3,0:3:6.02:0,6,93	0/0:57,1:4:6.01:0,6,76	0/0:71,2:12:14.92:0,15,209	0/0:10,0:10:27.09:0,27,424	0/0:12,1:11:27.08:0,27,395	0/0:23,0:22:62.95:0,63,953	1/1:13,1:14:29.54:307,30,0	0/0:13,1:13:29.83:0,30,335	0/0:8,0:8:17.90:0,18,156	0/0:15,0:15:26.82:0,27,217	0/0:17,1:17:20.02:0,20,163	0/0:11,0:11:29.48:0,29,305	0/0:10,0:9:27.09:0,27,418	0/0:11,1:12:30.09:0,30,448	0/1:16,1:16:5.62:6,0,302	0/0:21,3:22:51.13:0,51,729	1/1:12,1:12:16.61:80,17,0	0/0:25,0:18:51.16:0,51,748	0/0:4,0:4:12.04:0,12,187	0/0:78,2:72:99:0,122,1914	0/0:8,0:8:5.89:0,6,67	0/0:6,0:5:12.04:0,12,191	0/0:22,2:21:38.70:0,39,433	0/1:8,0:5:10.96:11,0,79	0/0:10,0:9:24.03:0,24,352	0/0:4,0:4:12.04:0,12,188	0/0:7,0:7:21.07:0,21,335
chr10	74471000	.	T	TCA	2426.45	PASS	AB=0.812;AC=17;AF=0.315;AN=54;BaseQRankSum=-0.333;DP=548;FS=5.461;HRun=0;HaplotypeScore=93.4539;InbreedingCoeff=0.3936;MQ=45.22;MQ0=49;MQRankSum=-0.438;QD=13.33;ReadPosRankSum=-0.564;VQSLOD=3.0804;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,7:20:15.60:308,0,16	0/0:2,0:3:6.01:0,6,60	0/0:59,0:4:4.83:0,5,41	0/0:73,0:12:12.68:0,13,76	0/0:10,0:10:25.32:0,25,289	0/0:12,0:11:17.68:0,18,198	0/0:21,0:22:32.69:0,33,365	0/1:14,0:14:15.92:34,0,16	0/1:11,4:13:0.41:220,0,0	1/1:5,4:9:15.05:237,15,0	1/1:5,10:15:24.08:382,24,0	1/1:11,8:18:27.09:411,27,0	1/1:8,4:12:14.79:203,15,0	0/0:10,0:9:24.07:0,24,285	0/0:11,0:12:23.89:0,24,253	0/1:13,6:17:8.70:306,0,9	0/0:23,0:21:20.72:0,21,270	0/1:16,0:14:35.15:35,0,37	0/0:26,0:18:33.10:0,33,391	0/0:4,0:4:9.01:0,9,96	0/0:79,0:72:72.68:0,73,929	0/1:5,4:9:29.72:42,0,30	./.	0/1:13,11:21:11.66:310,0,12	1/1:5,3:5:9.01:118,9,0	0/0:10,0:10:15.04:0,15,171	0/0:4,0:4:6.02:0,6,72	0/0:7,0:7:18.05:0,18,214
chr10	74471045	.	TCACACACACACACACACACACACACACA	T	2312.07	PASS	AB=0.913;AC=22;AF=0.423;AN=52;BaseQRankSum=1.733;DP=627;FS=23.759;HRun=0;HaplotypeScore=234.1349;InbreedingCoeff=0.4804;MQ=37.58;MQ0=92;MQRankSum=-2.746;QD=10.19;ReadPosRankSum=-2.560;VQSLOD=0.9655;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:20:4.79:69,5,0	0/0:2,0:3:3:0,3,29	./.	./.	0/0:15,0:13:18.02:0,18,666	0/0:21,0:15:18.53:0,19,1111	0/0:22,0:15:15.03:0,15,699	0/1:12,0:7:16.59:39,0,17	1/1:13,0:7:2.89:20,3,0	0/1:14,13:23:67.99:730,0,68	1/1:9,0:9:3:27,3,0	1/1:19,0:15:23.90:399,24,0	1/1:19,0:16:26.73:620,27,0	0/0:12,0:11:21:0,21,1134	0/0:17,0:15:26.96:0,27,1682	0/1:16,0:13:69.68:83,0,70	0/0:25,0:22:38.34:0,38,2302	0/1:20,0:18:99:108,0,147	0/0:20,0:11:15.05:0,15,1042	0/0:6,0:5:3:0,3,25	0/0:77,0:63:63.58:0,64,3457	1/1:3,10:12:5.93:40,6,0	1/1:2,0:2:1.55:4,2,0	1/1:36,0:24:17.34:222,17,0	1/1:10,0:8:7:128,7,0	0/0:14,0:13:15.05:0,15,1115	0/0:8,0:6:11.98:0,12,426	0/0:8,0:8:21.07:0,21,1217
chr10	74471073	.	A	AT	2035.22	PASS	AB=0.721;AC=20;AF=0.357;AN=56;BaseQRankSum=7.461;DP=662;FS=19.636;HRun=0;HaplotypeScore=104.4293;InbreedingCoeff=0.4616;MQ=38.24;MQ0=82;MQRankSum=-5.604;QD=8.66;ReadPosRankSum=0.469;VQSLOD=2.1702;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,13:22:2.26:212,0,2	0/0:5,0:5:3.85:0,4,79	0/0:43,0:4:12.04:0,12,165	0/0:53,0:11:27.09:0,27,367	0/0:20,0:19:33.08:0,33,422	0/0:26,0:19:33.11:0,33,451	0/0:31,0:19:26.91:0,27,292	1/1:8,2:1:2.90:16,3,0	0/1:9,3:7:29.82:127,0,30	1/1:29,0:20:3.93:250,4,0	1/1:1,2:3:2.96:48,3,0	1/1:10,8:15:4.55:310,5,0	0/1:14,10:21:1.26:384,0,1	0/0:22,0:22:42.56:0,43,556	0/0:24,0:23:36.50:0,37,479	0/1:11,5:11:47.57:48,0,49	0/0:33,0:27:59.94:0,60,775	1/1:13,6:12:4.88:253,5,0	0/0:20,0:14:36.12:0,36,497	0/0:13,0:11:22.01:0,22,291	0/0:81,0:65:99:0,102,1372	1/1:15,0:13:4.21:23,4,0	1/1:0,5:4:6.02:95,6,0	0/1:22,13:22:7.73:168,0,8	0/1:10,9:16:0.67:271,0,1	0/0:26,0:23:48.16:0,48,660	0/0:16,0:14:33.56:0,34,437	0/0:14,0:14:39.13:0,39,536
chr10	74471075	.	A	AT	143.32	PASS	AB=0.948;AC=15;AF=0.268;AN=56;BaseQRankSum=6.591;DP=631;FS=10.431;HRun=0;HaplotypeScore=98.0723;InbreedingCoeff=0.5029;MQ=39.33;MQ0=76;MQRankSum=-5.166;QD=1.05;ReadPosRankSum=2.605;VQSLOD=0.8965;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,1:18:1.42:44,1,0	0/0:6,0:6:10.85:0,11,128	0/0:36,0:4:12.04:0,12,166	0/0:53,0:13:33.11:0,33,451	0/0:20,0:19:36.09:0,36,459	0/0:25,0:18:30.10:0,30,412	0/0:31,0:19:26.94:0,27,310	0/1:8,0:2:9.75:10,0,19	0/0:12,0:8:7.03:0,7,84	0/0:30,0:21:7.53:0,8,73	1/1:2,0:2:0.47:1,0,0	0/0:14,0:12:0.29:0,0,34	1/1:20,0:15:13.71:98,14,0	0/0:22,0:22:45.62:0,46,611	0/0:23,0:23:33.54:0,34,459	0/1:12,1:8:38.50:39,0,50	0/0:34,0:28:60.51:0,61,776	1/1:15,0:10:8:39,8,0	0/0:20,0:15:42.13:0,42,564	0/0:13,0:11:25.02:0,25,331	0/0:79,0:67:99:0,100,1340	0/0:15,0:13:3:0,3,26	1/1:5,0:4:0.47:1,0,0	0/1:31,1:19:0.80:4,0,1	1/1:15,1:13:4.55:51,5,0	0/0:28,0:25:54.18:0,54,739	0/0:16,0:14:30.57:0,31,414	0/0:13,0:13:36.12:0,36,498
chr10	74474660	.	A	AATGG	7273.69	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-9.163;DP=731;FS=0.900;HRun=0;HaplotypeScore=114.8333;InbreedingCoeff=0.9743;MQ=70.20;MQ0=5;MQRankSum=1.597;QD=24.09;ReadPosRankSum=0.546;VQSLOD=4.8168;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:48:18.06:286,18,0	0/0:6,0:6:15.04:0,15,211	0/0:36,0:27:6.02:0,6,77	0/0:35,0:23:15.05:0,15,223	0/0:21,0:21:36.12:0,36,550	0/0:21,0:21:51.16:0,51,754	0/0:21,0:21:18.06:0,18,278	0/0:26,0:26:18.05:0,18,256	1/1:5,14:19:24.08:566,24,0	1/1:15,12:27:36.12:777,36,0	1/1:6,7:13:18.06:352,18,0	1/1:6,14:20:24.08:566,24,0	1/1:12,19:33:42.14:987,42,0	0/0:31,0:31:72.23:0,72,1096	0/0:40,0:40:75.26:0,75,1166	1/1:10,16:30:33.11:742,33,0	0/0:32,0:32:54.18:0,54,832	0/0:27,0:27:33.09:0,33,481	0/0:24,0:24:30.10:0,30,467	0/0:27,0:27:45.15:0,45,698	0/0:27,0:27:57.15:0,57,818	1/1:5,16:21:38.94:909,39,0	1/1:11,16:27:26.77:613,27,0	1/1:18,20:39:27.09:637,27,0	1/1:10,14:25:36.12:838,36,0	0/0:19,0:19:36.11:0,36,523	0/0:27,0:27:42.14:0,42,645	0/0:9,0:9:21.07:0,21,324
chr10	74474901	.	AAC	A	257.46	PASS	AB=0.900;AC=12;AF=0.240;AN=50;BaseQRankSum=4.322;DP=582;FS=3.530;HRun=0;HaplotypeScore=84.4092;InbreedingCoeff=0.2260;MQ=65.83;MQ0=4;MQRankSum=0.114;QD=1.58;ReadPosRankSum=1.325;VQSLOD=1.7000;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:34:7.90:35,8,0	0/1:7,0:7:17.92:26,0,18	./.	./.	0/1:16,0:16:14.47:14,0,162	0/1:13,1:14:7.66:8,0,118	0/0:25,0:25:17.91:0,18,176	0/0:27,0:27:23.14:0,23,151	0/0:11,0:16:3.46:0,3,24	0/1:14,6:20:6.99:75,0,7	1/1:7,5:13:8.75:62,9,0	0/0:22,0:22:12.02:0,12,142	0/0:13,0:13:14.96:0,15,148	0/0:23,0:23:20.98:0,21,224	0/0:33,0:33:24.04:0,24,308	1/1:15,6:23:17.61:141,18,0	0/0:22,0:22:24.06:0,24,331	0/0:10,0:14:3:0,3,26	0/0:19,0:19:6.01:0,6,70	0/0:19,0:19:15.05:0,15,221	0/0:39,0:39:22.98:0,23,239	./.	0/0:13,0:13:3.01:0,3,30	0/0:33,0:32:11.37:0,11,121	0/1:10,5:15:17.13:27,0,17	0/1:17,1:19:19.26:19,0,67	0/0:21,0:21:21.49:0,21,260	0/0:4,0:4:3.01:0,3,45
chr10	74475754	.	A	ATGTGTG	1737.04	PASS	AB=0.851;AC=21;AF=0.404;AN=52;BaseQRankSum=1.494;DP=667;FS=26.511;HRun=0;HaplotypeScore=158.0833;InbreedingCoeff=0.3106;MQ=59.11;MQ0=15;MQRankSum=1.166;QD=5.25;ReadPosRankSum=-3.163;VQSLOD=0.1895;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:33:1.36:0,1,214	0/0:9,0:11:12.02:0,12,176	./.	./.	0/0:28,0:32:33.08:0,33,545	0/0:18,0:20:32.78:0,33,591	0/0:19,0:19:11.97:0,12,182	0/1:31,0:29:16.26:62,0,16	1/1:9,8:20:4.05:101,4,0	1/1:8,0:17:14.65:173,15,0	0/1:13,0:24:43.12:152,0,43	1/1:11,11:24:6.02:135,6,0	1/1:16,0:19:24.02:383,24,0	0/0:12,0:14:21.05:0,21,358	0/0:14,0:15:26.88:0,27,481	0/1:7,0:15:37.49:224,0,37	0/0:20,0:22:39.11:0,39,735	0/1:11,0:28:63.14:63,0,63	0/1:19,0:22:3.30:3,0,55	0/0:27,0:32:32.06:0,32,717	0/1:42,0:43:36.68:37,0,710	0/0:5,0:10:3.01:0,3,61	1/1:9,4:16:5.59:134,6,0	1/1:21,8:30:3.01:97,3,0	0/0:14,0:21:2.95:0,3,19	1/1:13,0:29:31.18:340,31,0	0/0:31,0:33:45.09:0,45,755	0/1:12,0:12:1.95:2,0,209
chr10	74476032	.	A	AAGCAGGAGTGCTCCCAACCGCTGGGC	30812.24	PASS	AB=0.929;AC=47;AF=0.904;AN=52;BaseQRankSum=-6.498;DP=229;FS=1.684;HRun=0;HaplotypeScore=286.0769;InbreedingCoeff=-0.1435;MQ=73.81;MQ0=0;MQRankSum=-0.848;QD=134.55;ReadPosRankSum=0.254;VQSLOD=3.8455;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:17.17:2093,17,0	1/1:4,0:4:9.50:781,10,0	1/1:7,0:7:9.25:752,9,0	0/1:4,1:9:10.07:1498,0,10	1/1:11,0:11:21.07:1043,21,0	1/1:8,0:8:15.05:770,15,0	1/1:12,0:12:33.07:2260,33,0	1/1:18,0:18:51.18:3519,51,0	1/1:7,0:7:18.06:1481,18,0	1/1:11,0:11:1.65:1336,2,0	1/1:7,0:7:15.05:684,15,0	0/1:6,0:6:5.58:697,0,6	1/1:7,0:7:4.96:896,5,0	1/1:12,0:12:3.35:1103,3,0	1/1:13,0:13:4.30:1857,4,0	1/1:7,0:7:0.70:936,1,0	1/1:10,0:10:19.66:1214,20,0	./.	1/1:8,0:8:21.07:2009,21,0	0/1:9,0:9:1.78:965,0,2	1/1:5,0:5:6.02:270,6,0	1/1:3,0:3:3.01:123,3,0	1/1:3,0:3:9.03:661,9,0	1/1:7,0:7:12.03:411,12,0	0/1:12,0:12:16.54:847,0,17	1/1:11,0:11:24.15:1629,24,0	0/1:11,0:11:0.41:979,0,0	./.
chr10	74478405	.	GAAAT	G	1443.78	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.632;DP=462;FS=15.193;HRun=0;HaplotypeScore=71.4878;InbreedingCoeff=0.9836;MQ=80.20;MQ0=0;MQRankSum=-2.170;QD=42.46;ReadPosRankSum=-0.964;VQSLOD=2.2414;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.29:0,84,2206	0/0:5,0:5:15.05:0,15,369	0/0:13,0:13:39.13:0,39,945	0/0:12,0:12:30.10:0,30,718	0/0:25,0:25:69.24:0,69,1826	0/0:14,0:14:36.12:0,36,920	0/0:14,0:14:39.13:0,39,1001	1/1:2,19:21:54.17:950,54,0	0/0:7,0:7:18.06:0,18,480	0/0:27,0:27:78.27:0,78,2041	0/0:23,0:22:66.21:0,66,1704	0/0:16,0:16:48.16:0,48,1279	0/0:12,0:12:33.11:0,33,879	0/0:7,0:7:21.07:0,21,558	0/0:14,0:14:42.13:0,42,1019	0/0:15,0:15:42.14:0,42,1064	0/0:31,0:31:93.29:0,93,2387	1/1:1,12:13:33.11:616,33,0	0/0:17,0:17:51.18:0,51,1327	0/0:23,0:23:69.24:0,69,1840	0/0:12,0:12:33.11:0,33,873	0/0:12,0:12:33.11:0,33,879	0/0:14,0:14:36.11:0,36,879	0/0:8,0:8:24.08:0,24,604	0/0:12,0:12:33.11:0,33,880	0/0:20,0:20:57.18:0,57,1463	0/0:15,0:14:45.15:0,45,1164	0/0:30,0:30:81.28:0,81,2156
chr10	74479190	.	C	CG	898.38	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=1.702;DP=484;FS=1.530;HRun=1;HaplotypeScore=64.0946;InbreedingCoeff=0.9161;MQ=52.92;MQ0=12;MQRankSum=-6.560;QD=25.67;ReadPosRankSum=-3.904;VQSLOD=2.4909;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:81.03:0,81,993	0/0:8,0:8:24.08:0,24,305	./.	./.	0/0:17,0:16:24.06:0,24,297	0/0:14,0:14:33.05:0,33,406	0/0:17,0:15:38.92:0,39,426	1/1:10,8:17:38.88:432,39,0	0/0:22,0:22:45.10:0,45,529	0/0:14,0:13:36:0,36,405	0/0:10,0:8:24.06:0,24,284	0/0:15,0:15:36.06:0,36,410	0/0:15,0:15:33.05:0,33,380	0/0:31,0:31:75.14:0,75,895	0/0:19,0:19:48.13:0,48,579	0/0:20,0:20:57.15:0,57,680	0/0:35,0:34:84.15:0,84,1018	1/1:5,12:17:47.85:587,48,0	0/0:21,0:27:40.31:0,40,487	0/0:14,0:16:36.75:0,37,394	0/0:15,0:15:39.11:0,39,480	0/0:5,0:3:6.02:0,6,78	0/0:6,0:6:9.02:0,9,104	0/0:25,0:23:66.14:0,66,781	0/0:16,0:15:39.10:0,39,467	0/0:23,0:23:63.11:0,63,781	0/0:25,0:27:62.15:0,62,735	0/0:8,0:8:21.07:0,21,272
chr10	74479215	.	GA	G	505.66	PASS	AB=0.882;AC=7;AF=0.125;AN=56;BaseQRankSum=4.331;DP=530;FS=2.981;HRun=12;HaplotypeScore=66.6530;InbreedingCoeff=0.7632;MQ=60.14;MQ0=6;MQRankSum=-1.038;QD=7.33;ReadPosRankSum=-1.375;VQSLOD=2.2131;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,1:36:57.33:0,57,718	0/0:8,0:8:18.03:0,18,178	1/1:8,0:2:2.65:11,3,0	0/0:11,0:8:17.89:0,18,95	0/0:18,2:20:21.81:0,22,388	0/0:17,0:17:46.96:0,47,445	0/0:14,0:13:29.89:0,30,288	1/1:10,17:26:36.60:342,37,0	0/0:15,0:15:28.30:0,28,277	0/0:19,0:19:43.37:0,43,438	0/0:14,0:13:39.04:0,39,384	0/0:12,1:13:12.83:0,13,310	0/0:15,0:15:32.87:0,33,309	0/0:26,0:26:57.10:0,57,568	0/0:17,0:17:38.95:0,39,380	0/0:14,0:14:36.06:0,36,359	0/0:40,0:39:86.91:0,87,838	1/1:1,18:19:35.86:279,36,0	0/0:29,0:29:46.94:0,47,457	0/0:21,0:20:35.84:0,36,287	0/0:19,1:20:30.83:0,31,483	0/0:6,0:6:15.03:0,15,152	0/0:9,0:9:18.03:0,18,180	0/0:22,0:22:54.97:0,55,508	0/0:23,0:24:59.89:0,60,569	0/0:28,3:29:25.39:0,25,617	0/1:13,1:15:8:8,0,115	0/0:14,1:15:13.72:0,14,312
chr10	74479395	.	AAAAT	A	504.21	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.616;DP=543;FS=7.088;HRun=0;HaplotypeScore=88.0359;InbreedingCoeff=0.9654;MQ=73.64;MQ0=5;MQRankSum=-3.456;QD=11.46;ReadPosRankSum=-4.230;VQSLOD=0.4192;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:48.05:0,48,1302	0/0:8,0:8:24.08:0,24,494	0/0:36,0:18:31.94:0,32,421	0/0:34,0:17:8.94:0,9,239	0/0:25,0:25:65.62:0,66,1131	0/0:16,0:16:45.06:0,45,902	0/0:13,0:13:39.11:0,39,770	1/1:17,4:21:40.38:401,40,0	0/0:14,0:14:39.11:0,39,729	0/0:24,0:24:71.17:0,71,1220	0/0:19,0:19:50.72:0,51,820	0/0:14,0:14:35.76:0,36,748	0/0:15,0:15:40.95:0,41,765	0/0:14,0:14:29.64:0,30,624	0/0:19,0:19:53.84:0,54,952	0/0:18,0:18:50.98:0,51,941	0/0:23,0:23:50.24:0,50,1133	1/1:4,19:23:20.90:224,21,0	0/0:21,0:21:48.18:0,48,734	0/0:21,0:21:59.49:0,59,1033	0/0:10,0:10:26.91:0,27,425	0/0:10,0:10:29.28:0,29,517	0/0:22,0:22:62.11:0,62,1019	0/0:11,0:11:30.08:0,30,536	0/0:17,0:17:51.14:0,51,960	0/0:25,0:25:62:0,62,1216	0/0:24,0:24:56.34:0,56,1055	0/0:19,0:19:50.98:0,51,945
chr10	74479398	.	AT	A	432.12	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.361;DP=547;FS=1.918;HRun=1;HaplotypeScore=59.5140;InbreedingCoeff=0.8844;MQ=71.98;MQ0=5;MQRankSum=-2.813;QD=9.82;ReadPosRankSum=-5.307;VQSLOD=-0.7502;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:47:0,47,640	0/0:9,0:9:23.87:0,24,247	0/0:36,1:17:19.11:0,19,212	0/0:35,1:18:9.72:0,10,128	0/0:24,0:24:51.53:0,52,550	0/0:18,0:18:50.99:0,51,511	0/0:13,0:13:39.05:0,39,397	1/1:21,0:21:50.96:394,51,0	0/0:14,0:14:37.94:0,38,329	0/0:25,0:25:68.45:0,68,601	0/0:20,0:20:52.71:0,53,459	0/0:14,0:14:35.65:0,36,381	0/0:14,0:14:23.69:0,24,354	0/0:11,1:12:10.49:0,10,251	0/0:19,0:19:51.42:0,51,459	0/0:17,0:17:25.22:0,25,420	0/0:24,0:24:40.79:0,41,561	1/1:23,0:23:20.85:158,21,0	0/0:22,0:22:42.89:0,43,451	0/0:20,0:20:16.46:0,16,476	0/0:9,0:9:11.97:0,12,208	0/0:11,0:11:6.57:0,7,273	0/0:22,0:22:42.80:0,43,494	0/0:10,1:11:29.38:0,29,272	0/0:18,0:18:49.80:0,50,475	0/0:24,0:24:61.93:0,62,590	0/0:25,0:25:62.14:0,62,591	0/0:18,0:18:50.06:0,50,485
chr10	74479885	.	ATG	A	2287.34	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.185;DP=338;FS=0.000;HRun=0;HaplotypeScore=49.0929;InbreedingCoeff=0.6351;MQ=76.67;MQ0=8;MQRankSum=1.299;QD=37.50;ReadPosRankSum=-1.299;VQSLOD=5.0439;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:42.11:0,42,729	0/0:4,0:4:12.04:0,12,231	0/0:16,0:9:1.21:0,1,63	0/0:28,0:11:6.49:0,6,91	0/0:18,0:18:54.17:0,54,972	0/0:15,0:15:20.79:0,21,626	0/0:7,0:7:21.02:0,21,305	1/1:2,37:39:99:1485,111,0	0/0:3,0:3:9.01:0,9,138	0/0:8,0:8:24.08:0,24,397	0/0:7,0:7:18.06:0,18,345	0/0:3,0:3:6:0,6,82	0/0:4,0:4:12.01:0,12,162	0/0:3,0:3:9.03:0,9,174	0/0:5,0:5:14.99:0,15,156	0/0:5,0:5:12.02:0,12,195	0/0:26,0:26:72.23:0,72,1331	1/1:6,16:21:63.19:922,63,0	0/0:10,0:9:27.08:0,27,470	0/0:16,0:16:48.11:0,48,782	0/0:4,0:4:11.99:0,12,131	0/0:1,0:1:3.01:0,3,56	0/0:4,0:4:12.01:0,12,162	0/0:3,0:3:6:0,6,82	0/0:12,0:12:30.09:0,30,524	0/0:17,0:17:51.17:0,51,948	0/0:17,0:17:48.10:0,48,790	0/0:21,0:19:54.12:0,54,902
chr10	74479919	.	A	ATG	2349.02	PASS	AB=0.793;AC=22;AF=0.407;AN=54;BaseQRankSum=-4.205;DP=309;FS=0.543;HRun=0;HaplotypeScore=46.2187;InbreedingCoeff=0.5104;MQ=68.44;MQ0=4;MQRankSum=-0.964;QD=18.35;ReadPosRankSum=2.613;VQSLOD=3.6076;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:5,10:15:11.47:308,0,11	0/0:4,0:4:12.03:0,12,139	0/0:9,0:4:4.03:0,4,21	0/0:17,0:5:5.74:0,6,42	0/0:26,0:26:42.48:0,42,762	0/0:17,0:17:39.08:0,39,466	0/0:9,0:9:27.06:0,27,326	0/1:34,0:33:99:127,0,303	0/1:1,3:4:15.17:138,0,15	1/1:0,11:11:33.11:550,33,0	1/1:2,8:10:1.63:187,2,0	1/1:1,3:4:6.02:100,6,0	1/1:0,4:4:8.95:150,9,0	0/0:2,0:2:3.01:0,3,38	0/0:4,0:4:12.04:0,12,152	1/1:1,4:5:6.02:100,6,0	0/0:22,0:22:56.62:0,57,663	0/1:20,0:20:99:164,0,138	0/0:9,0:9:27.06:0,27,316	0/0:16,0:16:42.07:0,42,478	./.	1/1:0,2:2:6.02:100,6,0	1/1:0,3:3:9.03:151,9,0	1/1:1,1:2:4.83:55,5,0	1/1:1,13:14:24.08:401,24,0	0/0:13,0:13:21.06:0,21,255	0/0:19,0:19:45.02:0,45,483	0/0:13,0:13:39.06:0,39,439
chr10	74479929	.	G	GTA	1785.72	PASS	AB=0.937;AC=18;AF=0.360;AN=50;BaseQRankSum=3.421;DP=297;FS=0.531;HRun=0;HaplotypeScore=44.8749;InbreedingCoeff=0.2153;MQ=61.61;MQ0=2;MQRankSum=0.274;QD=13.84;ReadPosRankSum=2.314;VQSLOD=2.8582;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:89.69:126,0,90	0/0:4,0:4:9.03:0,9,110	./.	./.	0/0:25,1:28:32.32:0,32,817	0/0:15,0:17:41.93:0,42,465	0/0:8,0:9:26.90:0,27,294	0/1:24,6:30:48.73:509,0,49	0/1:5,0:5:46.35:65,0,46	0/1:14,0:14:15.03:249,0,15	0/1:10,0:10:43.33:87,0,43	0/1:4,0:4:15.70:42,0,16	1/1:4,0:4:8.90:76,9,0	0/0:2,0:2:5.94:0,6,42	0/0:4,0:4:12.04:0,12,147	0/1:5,0:5:9.45:41,0,9	0/0:17,0:19:53.83:0,54,610	0/1:10,11:21:38.75:396,0,39	0/0:11,0:13:35.86:0,36,358	0/0:14,0:15:32.94:0,33,381	./.	1/1:2,0:2:6:52,6,0	1/1:3,0:3:8.99:77,9,0	1/1:1,0:1:3:25,3,0	1/1:12,0:12:23.98:208,24,0	0/0:8,0:8:21.06:0,21,247	0/0:15,0:17:44.77:0,45,477	0/0:17,0:17:39.04:0,39,421
chr10	74480724	.	TACACACAGAC	T	239.16	PASS	AB=0.971;AC=5;AF=0.114;AN=44;BaseQRankSum=2.816;DP=898;FS=4.314;HRun=0;HaplotypeScore=241.1441;InbreedingCoeff=0.5824;MQ=60.24;MQ0=43;MQRankSum=-1.559;QD=3.28;ReadPosRankSum=-0.379;VQSLOD=2.5540;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:13,0:13:12.04:0,12,470	./.	./.	0/0:16,0:14:6.02:0,6,267	0/0:32,0:32:24.08:0,24,877	0/0:56,0:54:21.07:0,21,332	./.	0/0:22,0:21:12.04:0,12,347	0/1:33,0:27:13.98:37,0,14	1/1:8,0:7:6.02:136,6,0	0/0:48,0:48:38.66:0,39,1402	0/0:31,0:31:12.04:0,12,279	0/0:43,0:43:36.12:0,36,1367	0/0:36,0:36:27.09:0,27,1194	1/1:24,7:30:6.02:174,6,0	0/0:38,0:37:54.08:0,54,1662	./.	0/0:28,0:23:21.07:0,21,722	0/0:15,0:15:15.05:0,15,645	0/0:99,0:95:87.24:0,87,3259	0/0:23,0:20:15.04:0,15,433	0/0:22,0:21:11.99:0,12,424	0/0:59,0:59:39.56:0,40,1164	./.	0/0:21,0:18:18.05:0,18,301	0/0:14,0:14:21.07:0,21,748	0/0:13,0:13:21.07:0,21,771
chr10	74482335	.	GTA	G	101.96	PASS	AB=0.826;AC=7;AF=0.159;AN=44;BaseQRankSum=1.174;DP=236;FS=17.685;HRun=0;HaplotypeScore=44.9785;InbreedingCoeff=0.0389;MQ=49.69;MQ0=6;MQRankSum=-0.407;QD=1.64;ReadPosRankSum=1.005;VQSLOD=0.0473;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:2.99:0,3,26	0/0:2,0:2:6.01:0,6,56	./.	0/1:10,0:3:0:0,0,0	0/0:5,0:5:6.02:0,6,90	0/0:3,0:3:5.94:0,6,44	0/0:6,0:8:6:0,6,53	0/0:36,0:35:23.67:0,24,154	0/0:11,0:11:10.25:0,10,83	0/0:10,0:9:14.77:0,15,151	./.	0/1:4,3:7:20.65:28,0,21	0/1:3,1:4:25.48:25,0,45	0/0:6,0:6:3.01:0,3,46	./.	0/0:5,0:5:2.74:0,3,12	0/1:15,7:23:99:120,0,376	0/1:10,0:12:10.62:20,0,11	1/1:3,0:4:3.31:15,3,0	./.	./.	0/0:6,0:6:2.98:0,3,27	0/0:4,0:4:2.77:0,3,21	./.	0/0:2,0:2:0.89:0,1,2	0/0:8,0:8:11.96:0,12,134	0/0:16,0:15:15.03:0,15,205	0/0:6,0:6:12.04:0,12,176
chr10	74482359	.	A	ATG	62.88	PASS	AB=0.967;AC=14;AF=0.292;AN=48;BaseQRankSum=2.903;DP=158;FS=0.000;HRun=0;HaplotypeScore=37.8598;InbreedingCoeff=0.1505;MQ=47.45;MQ0=3;MQRankSum=2.698;QD=1.85;ReadPosRankSum=1.142;VQSLOD=1.1201;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:2,5:7:2.47:0,2,10	0/1:3,0:3:15.05:30,0,15	./.	./.	0/0:6,0:6:15:0,15,164	0/1:3,0:3:0.45:0,0,41	1/1:2,0:2:3.45:22,3,0	0/0:35,0:31:71.45:0,71,569	0/1:3,1:4:11.78:43,0,12	0/1:6,0:6:13.24:13,0,115	./.	1/1:6,0:6:0.88:50,1,0	0/1:3,0:3:2.55:3,0,13	0/0:3,0:3:6.01:0,6,71	0/0:2,0:2:5.99:0,6,50	1/1:1,0:1:2.04:6,2,0	0/0:26,0:25:22.53:0,23,617	0/0:12,0:12:20.43:0,20,122	0/0:4,0:3:8.74:0,9,54	0/0:1,0:1:2.99:0,3,24	0/0:1,0:1:3:0,3,25	0/0:2,0:2:2.60:0,3,10	0/1:3,0:3:7.72:12,0,8	./.	1/1:3,0:3:2.04:6,2,0	0/0:5,0:5:15.04:0,15,198	0/0:6,0:6:18.05:0,18,251	0/0:4,0:4:9.50:0,10,138
chr10	74482363	.	A	ATGTGTG	496.67	PASS	AB=1.000;AC=18;AF=0.375;AN=48;BaseQRankSum=1.016;DP=149;FS=0.000;HRun=0;HaplotypeScore=47.1556;InbreedingCoeff=0.5797;MQ=52.24;MQ0=1;MQRankSum=0.358;QD=11.83;ReadPosRankSum=2.406;VQSLOD=1.5587;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:2.68:11,3,0	0/1:3,0:3:10.50:11,0,93	./.	0/1:5,0:2:0:0,0,0	0/0:6,0:6:15.05:0,15,289	0/0:3,0:3:5.89:0,6,84	0/0:2,0:2:5.93:0,6,49	0/0:30,0:28:59.44:0,59,966	1/1:4,0:4:10.85:80,11,0	1/1:2,4:6:6.02:156,6,0	./.	1/1:7,0:7:11.62:190,12,0	1/1:3,0:3:8:50,8,0	0/0:3,0:3:6.02:0,6,137	0/0:2,0:2:6.02:0,6,135	./.	0/0:23,0:24:63.21:0,63,1269	0/0:8,0:10:23.71:0,24,296	0/0:4,0:3:9.03:0,9,167	0/0:1,0:1:3.01:0,3,39	0/0:1,0:1:3.01:0,3,68	1/1:2,0:2:2.50:9,2,0	1/1:3,0:3:5.98:77,6,0	./.	1/1:3,0:3:3.01:68,3,0	0/0:5,0:5:12.04:0,12,276	0/0:6,0:6:15.05:0,15,342	0/0:4,0:4:12.04:0,12,261
chr10	74483621	.	C	CG	896.93	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.798;DP=483;FS=21.130;HRun=1;HaplotypeScore=75.3260;InbreedingCoeff=0.8458;MQ=51.12;MQ0=23;MQRankSum=-5.169;QD=24.24;ReadPosRankSum=0.283;VQSLOD=2.3370;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:28:66.09:0,66,782	0/0:9,0:8:21.07:0,21,270	0/0:7,0:3:0:0,0,0	0/0:9,0:4:1.62:0,2,8	0/0:16,0:14:36.05:0,36,410	0/0:14,0:14:30.09:0,30,375	0/0:18,0:18:53.96:0,54,603	1/1:5,19:22:54.15:772,54,0	0/0:16,0:13:36.02:0,36,408	0/0:23,0:21:56.96:0,57,633	0/0:14,0:13:35.91:0,36,372	0/0:14,0:14:33.03:0,33,344	0/0:15,0:13:29.87:0,30,320	0/0:17,0:13:24.06:0,24,295	0/0:24,0:24:54.15:0,54,670	0/0:17,0:16:42.01:0,42,491	0/0:33,0:29:62.81:0,63,710	1/1:7,6:10:18.03:243,18,0	0/0:15,0:13:18.05:0,18,221	0/0:17,0:15:30.08:0,30,366	0/0:14,0:13:30.07:0,30,386	0/0:13,0:10:24.01:0,24,264	0/0:15,0:14:32.94:0,33,326	0/0:20,0:19:36.07:0,36,445	0/0:18,0:18:42.06:0,42,472	0/0:26,0:20:57.11:0,57,661	0/0:21,0:20:45.12:0,45,553	0/0:10,0:8:18.06:0,18,227
chr10	74483634	.	CA	C	618.56	PASS	AB=0.863;AC=15;AF=0.268;AN=56;BaseQRankSum=1.425;DP=523;FS=0.000;HRun=15;HaplotypeScore=70.4762;InbreedingCoeff=0.1499;MQ=53.89;MQ0=21;MQRankSum=2.897;QD=3.05;ReadPosRankSum=1.610;VQSLOD=-0.3556;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:23:19.58:0,20,276	0/1:6,1:6:13.22:13,0,20	0/0:23,0:9:2.72:0,3,84	0/1:13,1:8:5.89:6,0,40	0/0:21,2:21:35.98:0,36,310	0/1:11,5:17:29.76:30,0,110	0/0:13,1:14:3.31:0,3,143	0/0:22,0:26:47.31:0,47,300	0/0:21,0:18:38.57:0,39,282	1/1:9,17:25:22.83:264,23,0	1/1:3,11:15:12.92:178,13,0	0/0:12,1:13:1.60:0,2,116	0/0:13,0:11:0.65:0,1,82	0/0:15,0:11:8.92:0,9,65	0/0:19,1:22:30.27:0,30,332	1/1:5,7:12:13.71:83,14,0	0/0:27,2:25:9.46:0,9,327	0/0:12,0:11:18.56:0,19,125	0/0:18,1:20:14.14:0,14,279	0/1:16,4:20:21.19:21,0,183	0/0:13,2:14:7.68:0,8,185	0/0:16,0:13:21:0,21,185	0/1:15,1:15:5.26:5,0,147	0/1:22,4:25:44.94:45,0,248	0/1:10,5:16:1.86:102,0,2	0/0:27,0:21:44.52:0,45,376	0/1:15,2:19:27.87:28,0,126	0/1:8,1:7:4.28:4,0,87
chr10	74485898	.	G	GA	855.32	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.654;DP=569;FS=3.227;HRun=9;HaplotypeScore=58.5302;InbreedingCoeff=0.9643;MQ=72.72;MQ0=9;MQRankSum=0.281;QD=17.82;ReadPosRankSum=-0.954;VQSLOD=3.5084;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,134,1135	0/0:5,0:5:12:0,12,104	0/0:43,0:23:15.49:0,15,163	0/0:32,0:19:35.15:0,35,263	0/0:22,0:22:41.97:0,42,363	0/0:22,0:22:62.99:0,63,546	0/0:16,0:16:41.98:0,42,364	1/1:6,17:23:43.99:472,44,0	0/0:13,0:13:35.99:0,36,312	0/0:15,0:15:32.97:0,33,286	0/0:10,0:10:29.86:0,30,246	0/0:22,0:22:62.99:0,63,547	0/0:11,0:11:29.99:0,30,260	0/0:22,0:22:59.94:0,60,513	0/0:11,0:11:23.96:0,24,205	0/0:8,0:8:20.99:0,21,182	0/0:30,0:30:74.72:0,75,636	1/1:4,21:25:25.09:505,25,0	0/0:19,0:19:47.97:0,48,413	0/0:5,0:5:15:0,15,130	0/0:19,0:19:47.99:0,48,416	0/0:21,0:21:56.99:0,57,494	0/0:15,0:15:32.99:0,33,286	0/0:26,0:26:68.98:0,69,599	0/0:17,0:17:38.98:0,39,338	0/0:35,0:35:91.52:0,92,782	0/0:14,0:14:35.98:0,36,313	0/0:20,0:20:53.97:0,54,469
chr10	74487195	.	AATTTTTATATATATATATATAT	A	479.66	PASS	AC=4;AF=0.087;AN=46;BaseQRankSum=5.195;DP=127;FS=12.774;HRun=0;HaplotypeScore=64.5802;InbreedingCoeff=0.3510;MQ=53.11;MQ0=4;MQRankSum=-1.544;QD=29.98;ReadPosRankSum=1.387;VQSLOD=0.3850;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:8:21.70:0,22,146	0/0:3,0:3:9.02:0,9,135	0/0:6,0:2:2.59:0,3,49	./.	0/0:6,0:6:18.06:0,18,307	0/0:3,0:3:6.02:0,6,108	0/0:1,0:1:3.01:0,3,44	1/1:4,11:12:33.10:537,33,0	./.	0/0:7,0:8:4.49:0,4,11	0/0:2,0:2:2.49:0,2,6	./.	0/0:3,0:3:3.06:0,3,8	./.	0/0:4,0:4:6.02:0,6,82	0/0:3,0:3:2.98:0,3,21	0/0:13,0:13:39.09:0,39,1865	1/1:1,0:1:3.01:45,3,0	0/0:10,0:10:27.08:0,27,513	0/0:5,0:5:9.02:0,9,133	0/0:4,0:4:6.02:0,6,96	./.	0/0:1,0:1:3:0,3,27	0/0:2,0:2:2.98:0,3,22	0/0:5,0:5:6.23:0,6,15	0/0:3,0:3:6.49:0,6,109	0/0:5,0:5:15.05:0,15,242	0/0:1,0:1:3.01:0,3,169
chr10	74488930	.	TA	T	1830.17	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.762;DP=506;FS=0.534;HRun=2;HaplotypeScore=52.4945;InbreedingCoeff=0.9935;MQ=73.60;MQ0=0;MQRankSum=0.284;QD=35.20;ReadPosRankSum=-2.624;VQSLOD=2.8078;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.23:0,75,1102	0/0:7,0:7:18.06:0,18,270	0/0:11,0:11:33.08:0,33,445	0/0:16,0:16:29:0,29,544	0/0:28,0:28:84.28:0,84,1259	0/0:28,0:28:84.27:0,84,1224	0/0:10,0:10:30.10:0,30,450	1/1:0,32:32:96.30:1231,96,0	0/0:16,0:16:48.16:0,48,719	0/0:21,0:21:63.21:0,63,944	0/0:23,0:23:66.22:0,66,982	0/0:11,0:11:33.11:0,33,495	0/0:22,0:22:63.21:0,63,944	0/0:14,0:14:42.14:0,42,629	0/0:17,0:17:48.11:0,48,675	0/0:21,0:21:63.20:0,63,921	0/0:14,0:14:42.14:0,42,623	1/1:1,19:20:57.14:721,57,0	0/0:20,0:20:54.18:0,54,807	0/0:29,0:29:84.28:0,84,1259	0/0:8,0:8:24.08:0,24,360	0/0:17,0:17:45.15:0,45,674	0/0:21,0:21:63.20:0,63,924	0/0:16,0:16:42.14:0,42,630	0/0:19,0:19:54.18:0,54,792	0/0:11,0:11:33.11:0,33,494	0/0:19,0:18:57.19:0,57,853	0/0:10,0:10:30.09:0,30,430
chr10	74488988	.	G	GA	873.13	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.318;DP=549;FS=12.115;HRun=7;HaplotypeScore=53.3851;InbreedingCoeff=0.9601;MQ=79.93;MQ0=0;MQRankSum=-0.368;QD=24.25;ReadPosRankSum=-3.558;VQSLOD=1.5962;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:54.16:0,54,648	0/0:7,0:7:15.02:0,15,145	0/0:14,0:14:24.03:0,24,230	0/0:13,0:13:35.89:0,36,329	0/0:37,0:37:99:0,99,955	0/0:28,0:28:78.09:0,78,736	0/0:14,0:14:36.06:0,36,347	1/1:1,19:20:57.14:663,57,0	0/0:28,0:28:81.12:0,81,777	0/0:21,0:21:51.08:0,51,492	0/0:23,0:23:57.08:0,57,550	0/0:12,0:12:36.06:0,36,348	0/0:19,0:19:51.08:0,51,492	0/0:19,0:19:57.08:0,57,543	0/0:23,0:22:66.10:0,66,637	0/0:23,0:23:60.07:0,60,569	0/0:14,0:14:38.96:0,39,352	1/1:5,10:16:9.12:325,9,0	0/0:22,0:22:54.06:0,54,510	0/0:27,0:27:72.09:0,72,688	0/0:16,0:16:40.30:0,40,423	0/0:19,0:19:54.07:0,54,516	0/0:22,0:22:60.10:0,60,579	0/0:17,0:17:39.06:0,39,375	0/0:19,0:19:51.06:0,51,486	0/0:21,0:21:57.09:0,57,550	0/0:18,0:18:51.08:0,51,492	0/0:10,0:10:30.05:0,30,290
chr10	74490408	.	C	CAAG	17129.31	PASS	AB=0.958;AC=27;AF=0.482;AN=56;BaseQRankSum=-14.355;DP=676;FS=5.576;HRun=0;HaplotypeScore=93.5955;InbreedingCoeff=0.9321;MQ=91.31;MQ0=0;MQRankSum=-7.033;QD=53.87;ReadPosRankSum=2.674;VQSLOD=7.1555;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,35:39:96.33:2086,96,0	0/0:10,0:10:30.09:0,30,484	0/0:29,0:29:75.01:0,75,1103	0/0:32,0:33:84.01:0,84,1296	0/0:19,0:19:54.17:0,54,890	0/0:34,0:34:93.30:0,93,1544	0/0:13,0:13:39.12:0,39,633	1/1:3,34:37:99:2465,111,0	1/1:3,13:16:45.15:990,45,0	1/1:5,17:21:57.20:1266,57,0	1/1:1,32:34:99:2099,99,0	1/1:3,19:22:57.19:1220,57,0	1/1:2,19:21:57.20:1313,57,0	0/0:25,0:25:72.22:0,72,1175	0/0:28,0:28:78.27:0,78,1326	1/1:0,26:28:63.22:1438,63,0	0/0:16,0:16:48.16:0,48,812	1/1:0,10:11:21.07:484,21,0	0/0:28,0:28:81.26:0,81,1326	0/0:26,0:26:75.24:0,75,1253	0/0:40,0:41:99:0,120,1981	1/1:1,12:13:33.11:727,33,0	1/1:1,23:24:63.21:1370,63,0	1/1:0,11:11:30.10:691,30,0	1/1:2,15:17:42.14:968,42,0	0/1:22,1:23:11.88:12,0,864	0/0:39,0:39:99:0,111,1857	0/0:17,0:17:51.17:0,51,869
chr10	74492641	.	T	TA	2188.23	PASS	AB=0.702;AC=13;AF=0.232;AN=56;BaseQRankSum=-6.406;DP=621;FS=5.263;HRun=12;HaplotypeScore=75.9271;InbreedingCoeff=0.6834;MQ=77.34;MQ0=0;MQRankSum=-0.553;QD=13.85;ReadPosRankSum=1.679;VQSLOD=4.2167;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:10,27:37:12.55:525,0,13	0/1:10,1:11:11.29:11,0,91	0/0:26,1:19:16.59:0,17,98	0/0:16,0:13:4.95:0,5,26	0/0:29,1:30:59.14:0,59,427	0/0:40,0:41:76.46:0,76,553	0/0:18,1:20:23.54:0,24,324	0/0:9,0:31:46.76:0,47,159	1/1:2,11:14:23.81:207,24,0	0/0:26,0:27:58.64:0,59,422	0/0:17,0:21:18.82:0,19,233	1/1:5,21:27:47.91:452,48,0	1/1:5,17:22:23.16:383,23,0	0/0:29,0:29:74.25:0,74,534	0/0:28,0:30:34.85:0,35,362	0/0:22,1:24:38.44:0,38,431	0/0:21,0:22:61.69:0,62,444	0/0:1,0:6:10.18:0,10,29	0/0:13,0:15:8.49:0,8,123	0/0:23,0:23:52.46:0,52,373	0/0:18,2:20:20.56:0,21,302	1/1:4,13:17:11.14:269,11,0	0/1:4,7:11:3.88:128,0,4	1/1:1,17:19:41.90:394,42,0	0/0:19,0:19:9.55:0,10,233	0/0:20,1:22:16.59:0,17,268	0/0:29,1:30:23.77:0,24,324	0/0:10,0:10:26.84:0,27,197
chr10	74493045	.	A	AAACC	1244.90	PASS	AB=0.807;AC=4;AF=0.071;AN=56;BaseQRankSum=-1.760;DP=599;FS=4.010;HRun=0;HaplotypeScore=117.5772;InbreedingCoeff=0.4537;MQ=71.25;MQ0=3;MQRankSum=-2.288;QD=18.58;ReadPosRankSum=1.172;VQSLOD=3.4109;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:49.01:0,49,622	0/0:7,0:7:18.04:0,18,222	0/0:34,0:21:32.73:0,33,442	0/1:15,0:10:14.36:14,0,189	0/0:49,0:49:99:0,127,1328	0/0:14,0:14:29.89:0,30,314	0/0:17,0:17:38.98:0,39,458	0/1:13,16:35:19.52:1000,0,20	0/0:27,0:27:60.19:0,60,759	0/0:23,0:23:60.03:0,60,701	0/0:18,0:18:38.54:0,39,460	0/0:21,0:21:19.50:0,19,446	0/0:18,0:18:42.07:0,42,504	0/0:13,0:13:36.01:0,36,436	0/0:18,0:18:46.23:0,46,546	0/0:27,0:26:67.88:0,68,806	0/0:11,0:11:30.04:0,30,369	1/1:5,9:17:20.80:344,21,0	0/0:21,0:21:60.07:0,60,718	0/0:34,0:34:88.95:0,89,933	0/0:16,0:16:32.67:0,33,394	0/0:12,0:12:25.85:0,26,298	0/0:14,0:14:12.16:0,12,442	0/0:8,0:8:21.07:0,21,271	0/0:22,0:22:49.20:0,49,587	0/0:31,0:31:79.22:0,79,912	0/0:38,0:36:90.12:0,90,1073	0/0:16,0:16:41.73:0,42,467
chr10	74494781	.	GT	G	563.47	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=6.249;DP=548;FS=0.000;HRun=12;HaplotypeScore=56.4227;InbreedingCoeff=0.6730;MQ=74.10;MQ0=7;MQRankSum=-2.314;QD=6.55;ReadPosRankSum=-0.531;VQSLOD=1.6007;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,1:23:42.26:0,42,527	0/0:2,0:2:6.01:0,6,61	0/1:46,0:14:23.20:23,0,70	0/0:23,0:11:26.89:0,27,152	0/0:43,0:45:99:0,109,1098	0/0:18,1:19:30.84:0,31,484	0/0:19,0:19:54.05:0,54,520	1/1:6,18:25:54.32:391,54,0	0/0:15,0:15:33.03:0,33,320	0/0:25,0:25:57.06:0,57,558	0/0:22,0:22:56.95:0,57,548	0/0:14,0:14:35.92:0,36,334	0/0:19,0:19:44.81:0,45,427	0/0:13,1:17:11.05:0,11,303	0/0:17,0:17:42.07:0,42,418	0/0:15,1:16:18.84:0,19,366	0/0:18,2:20:4.56:0,5,383	1/1:3,12:15:35.85:278,36,0	0/0:16,0:16:48.01:0,48,451	0/0:22,0:26:53.68:0,54,483	0/0:3,0:3:9.02:0,9,91	0/0:11,0:11:23.91:0,24,228	0/0:19,0:19:44.08:0,44,409	0/0:11,0:11:27.05:0,27,274	0/0:16,1:19:27.50:0,28,415	0/0:25,0:25:66.09:0,66,648	0/0:24,0:25:65.93:0,66,635	0/0:9,0:11:29.71:0,30,264
chr10	74495174	.	AAG	A	43.47	PASS	AB=0.935;AC=9;AF=0.205;AN=44;BaseQRankSum=1.635;DP=315;FS=0.000;HRun=0;HaplotypeScore=45.2394;InbreedingCoeff=0.0583;MQ=74.46;MQ0=7;MQRankSum=0.754;QD=0.43;ReadPosRankSum=-1.233;VQSLOD=1.2834;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:8:2.99:0,3,23	0/0:1,0:1:3.01:0,3,46	0/0:21,0:15:0:0,0,0	0/0:20,0:12:5.35:0,5,30	0/1:13,3:16:35.20:35,0,278	0/1:12,2:14:38.60:39,0,315	0/0:15,0:15:12.02:0,12,162	0/0:31,0:31:15.22:0,15,142	1/1:5,0:5:2.27:21,2,0	./.	0/0:3,0:3:3:0,3,27	./.	1/1:10,0:9:2.99:24,3,0	0/0:8,0:8:18.06:0,18,271	0/1:18,0:18:6.78:7,0,294	0/0:9,0:9:6:0,6,52	0/1:23,1:24:5.66:6,0,492	0/0:20,0:19:12.29:0,12,95	0/0:14,0:14:24.01:0,24,303	0/0:11,0:11:21.04:0,21,267	0/0:10,1:11:7.56:0,8,236	./.	./.	./.	0/0:3,0:3:3:0,3,26	0/1:15,0:15:28.17:28,0,200	0/0:13,0:13:18.04:0,18,247	./.
chr10	74495361	.	AAT	A	227.86	PASS	AB=0.857;AC=7;AF=0.206;AN=34;BaseQRankSum=2.766;DP=159;FS=5.946;HRun=0;HaplotypeScore=26.1962;InbreedingCoeff=-0.1797;MQ=70.43;MQ0=0;MQRankSum=1.166;QD=3.04;ReadPosRankSum=0.446;VQSLOD=0.0042;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:1:3:0,3,25	0/0:2,0:2:3.01:0,3,48	0/0:5,0:5:0:0,0,0	0/1:5,0:3:0:0,0,0	0/1:12,1:13:2.69:3,0,390	0/1:15,2:17:38.41:38,0,397	0/0:3,0:3:3.01:0,3,48	0/0:20,0:30:49.03:0,49,400	./.	./.	./.	./.	./.	./.	0/1:4,1:5:23.74:24,0,107	./.	0/0:13,0:13:30.10:0,30,477	0/0:0,0:5:6:0,6,53	0/1:10,4:14:95.99:96,0,212	0/0:5,0:5:6.02:0,6,96	0/0:3,0:3:6.01:0,6,69	./.	./.	./.	./.	0/1:9,4:13:99:119,0,142	0/0:9,0:8:18.06:0,18,286	0/1:6,2:8:47.46:47,0,239
chr10	74496275	.	GGGAA	G	950.91	PASS	AB=0.840;AC=19;AF=0.365;AN=52;BaseQRankSum=7.104;DP=469;FS=10.529;HRun=0;HaplotypeScore=82.1042;InbreedingCoeff=0.6379;MQ=67.54;MQ0=2;MQRankSum=-1.610;QD=4.90;ReadPosRankSum=-0.174;VQSLOD=0.9826;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:15.03:0,15,196	0/0:3,0:3:9.03:0,9,189	./.	./.	0/1:18,0:18:24.97:25,0,394	0/0:19,0:19:30.10:0,30,617	0/0:14,0:14:18.05:0,18,366	0/0:17,0:16:5.98:0,6,60	1/1:6,11:17:12.04:184,12,0	0/1:17,0:23:20.25:111,0,20	1/1:16,0:20:11.81:76,12,0	0/1:10,6:16:18.97:40,0,19	1/1:15,8:23:12.04:184,12,0	0/0:23,0:23:36.12:0,36,796	0/0:28,0:28:39.12:0,39,817	1/1:11,0:19:6.42:43,6,0	0/0:19,0:18:18.06:0,18,400	0/0:14,0:14:17.91:0,18,151	0/0:16,0:15:18.05:0,18,348	0/0:22,0:22:27.09:0,27,567	0/0:6,0:6:9.03:0,9,208	1/1:9,7:16:17.89:218,18,0	1/1:16,1:17:9.03:136,9,0	1/1:10,1:11:5.75:58,6,0	1/1:6,0:14:8.93:63,9,0	0/0:22,0:22:30.10:0,30,665	0/0:28,0:28:39.13:0,39,846	0/0:9,0:9:15.05:0,15,332
chr10	74496328	.	AAAAG	A	1117.13	PASS	AB=0.919;AC=28;AF=0.667;AN=42;BaseQRankSum=3.707;DP=488;FS=36.848;HRun=0;HaplotypeScore=97.1182;InbreedingCoeff=0.3701;MQ=45.95;MQ0=36;MQRankSum=-1.177;QD=3.77;ReadPosRankSum=1.064;VQSLOD=0.2743;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:15:2.04:6,2,0	./.	./.	./.	0/1:11,10:19:25.95:146,0,26	1/1:21,0:19:11.90:89,12,0	./.	./.	1/1:17,0:17:14.96:128,15,0	1/1:17,0:17:11.64:96,12,0	1/1:19,0:18:5.86:40,6,0	1/1:12,0:12:8.50:65,9,0	0/1:19,0:19:55.81:56,0,128	1/1:23,0:22:9.03:133,9,0	1/1:16,0:16:15.02:184,15,0	1/1:17,0:16:3:28,3,0	1/1:27,0:22:11.96:97,12,0	./.	./.	0/0:32,0:31:36.04:0,36,647	0/0:8,0:8:3.01:0,3,44	1/1:14,0:13:11.99:102,12,0	1/1:11,0:10:3:28,3,0	0/0:32,0:16:5.33:0,5,36	0/1:19,0:19:8.09:59,0,8	0/1:19,0:19:10.90:11,0,113	0/0:23,0:23:21.01:0,21,302	0/0:23,0:18:14.91:0,15,136
chr10	74496384	.	GAAAGAAAGAA	G	1930.04	PASS	AB=0.944;AC=15;AF=0.268;AN=56;BaseQRankSum=9.078;DP=575;FS=8.891;HRun=0;HaplotypeScore=153.7210;InbreedingCoeff=0.1496;MQ=49.66;MQ0=48;MQRankSum=-2.205;QD=8.08;ReadPosRankSum=0.698;VQSLOD=2.1128;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:18:67.63:68,0,126	0/1:6,0:6:2.40:2,0,130	0/0:8,0:1:3.01:0,3,36	0/0:5,0:4:1.09:0,1,81	0/0:28,0:25:69.17:0,69,1135	0/0:30,0:26:26.34:0,26,748	0/0:11,0:10:30.06:0,30,349	1/1:22,0:18:20.45:409,20,0	0/1:17,0:19:99:193,0,167	1/1:28,0:22:8.47:454,8,0	0/1:29,0:23:5.47:324,0,5	0/1:21,0:21:99:124,0,199	0/0:23,0:23:53.69:0,54,811	0/0:23,0:22:57.18:0,57,873	0/0:21,0:21:60.19:0,60,914	0/1:20,0:13:25.37:89,0,25	0/0:25,0:22:18.30:0,18,457	1/1:19,0:12:7.66:221,8,0	0/0:20,0:16:39.13:0,39,674	0/0:24,0:23:68.21:0,68,2015	0/0:14,0:14:35.14:0,35,630	0/1:15,0:17:99:160,0,136	0/1:9,7:15:25.97:26,0,117	0/0:30,0:19:20.65:0,21,318	0/1:22,0:21:24.58:25,0,75	0/0:18,0:17:26.30:0,26,901	0/0:23,0:23:60.20:0,60,1395	0/0:33,0:32:72.06:0,72,1379
chr10	74496388	.	GAAAGAA	G	2857.47	PASS	AB=0.917;AC=19;AF=0.339;AN=56;BaseQRankSum=7.998;DP=584;FS=7.420;HRun=0;HaplotypeScore=119.6325;InbreedingCoeff=0.2638;MQ=51.40;MQ0=47;MQRankSum=-1.405;QD=9.13;ReadPosRankSum=-0.389;VQSLOD=1.5114;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:20:48.53:49,0,117	0/0:6,0:6:15.05:0,15,180	0/0:11,0:2:6.02:0,6,73	0/0:6,0:5:1.09:0,1,81	0/0:27,0:24:64.48:0,64,726	0/1:31,0:27:78.68:79,0,693	0/0:12,0:11:29.97:0,30,315	1/1:10,0:19:23.46:438,23,0	0/1:18,2:20:99:187,0,176	1/1:9,20:22:44.74:681,45,0	1/1:8,20:22:33.11:485,33,0	0/1:22,0:22:93.73:94,0,217	0/0:23,0:23:36.13:0,36,568	0/0:22,0:21:56.42:0,56,576	0/0:25,0:25:69.46:0,69,778	1/1:19,0:12:15.05:273,15,0	0/1:25,0:22:99:112,0,330	1/1:10,0:13:15.13:247,15,0	0/0:21,0:17:42.13:0,42,558	0/0:23,0:22:64.95:0,65,1464	0/0:15,0:15:37.93:0,38,571	0/1:16,2:18:99:161,0,163	0/1:16,0:15:28.20:28,0,109	0/0:28,0:19:20.77:0,21,254	0/1:3,19:21:47.54:209,0,48	0/1:18,1:18:0.61:1,0,731	0/0:23,0:23:60.19:0,60,1074	0/0:29,0:28:71.89:0,72,1187
chr10	74496392	.	GAA	G	1921.24	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=8.875;DP=590;FS=2.611;HRun=3;HaplotypeScore=88.6405;InbreedingCoeff=0.4701;MQ=51.95;MQ0=43;MQRankSum=-1.956;QD=7.04;ReadPosRankSum=-2.364;VQSLOD=-0.5318;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:19:45.73:46,0,132	0/0:6,0:6:15.05:0,15,181	0/0:12,0:3:9.03:0,9,109	0/0:8,0:6:4.08:0,4,112	0/0:29,0:26:26.91:0,27,542	0/0:32,0:28:51.63:0,52,845	0/0:13,0:12:32.98:0,33,351	1/1:26,0:22:23.62:439,24,0	0/1:20,0:20:48.11:48,0,176	1/1:24,5:22:44.84:567,45,0	1/1:25,3:22:32.79:413,33,0	0/0:21,0:21:3.31:0,3,258	0/1:23,0:23:8.52:9,0,319	0/0:21,0:20:19.20:0,19,412	0/1:26,0:26:1.19:1,0,654	1/1:1,17:11:15.05:204,15,0	0/1:25,0:22:2.10:2,0,367	1/1:18,0:12:16.32:248,16,0	0/0:19,0:19:48.09:0,48,550	0/0:23,0:22:64.33:0,64,885	0/0:17,0:17:40.37:0,40,517	0/1:18,0:18:38.45:38,0,192	0/0:16,0:15:0.22:0,0,109	0/0:29,0:20:29.89:0,30,215	1/1:21,1:21:8.33:89,8,0	0/0:19,0:18:28.24:0,28,600	0/0:24,0:24:63.13:0,63,783	0/0:28,0:28:71.89:0,72,973
chr10	74496982	.	T	TAA	970.99	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=-1.494;DP=565;FS=6.326;HRun=12;HaplotypeScore=71.2350;InbreedingCoeff=0.7395;MQ=66.13;MQ0=2;MQRankSum=-0.967;QD=13.68;ReadPosRankSum=-3.236;VQSLOD=1.6389;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:74.97:0,75,687	0/0:8,0:9:23.73:0,24,206	0/1:10,0:8:7.76:8,0,63	0/1:5,0:4:0:0,0,0	0/0:35,0:39:95.15:0,95,824	0/0:20,0:20:47.98:0,48,431	0/0:10,0:10:23.92:0,24,217	1/1:13,13:31:50.12:605,50,0	0/0:12,0:14:29.86:0,30,313	0/0:28,0:29:56.61:0,57,507	0/0:24,0:25:61.48:0,61,512	0/0:14,0:16:44.79:0,45,400	0/0:21,0:22:50.74:0,51,456	0/0:15,0:15:28.67:0,29,275	0/0:24,0:24:62.97:0,63,570	0/0:24,0:25:41.66:0,42,478	0/0:27,0:30:65.37:0,65,625	1/1:5,20:24:36.09:484,36,0	0/0:10,0:12:20.42:0,20,162	0/0:21,0:21:32.70:0,33,352	0/0:8,0:8:24.03:0,24,222	0/0:21,0:23:21.04:0,21,391	0/0:22,0:25:59.09:0,59,502	0/0:7,0:8:10.97:0,11,109	0/0:25,0:28:68.46:0,68,596	0/0:19,0:21:44.47:0,44,385	0/0:32,0:32:77.53:0,78,699	0/0:5,0:6:8.88:0,9,130
chr10	74497549	.	ATT	A	2072.37	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=3.089;DP=522;FS=13.757;HRun=6;HaplotypeScore=87.7533;InbreedingCoeff=0.9773;MQ=61.00;MQ0=4;MQRankSum=-0.148;QD=16.58;ReadPosRankSum=-2.345;VQSLOD=-0.1105;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:8.43:0,8,210	0/0:8,0:8:24.06:0,24,350	0/0:20,0:10:18.91:0,19,237	0/0:17,0:10:20.97:0,21,211	0/0:35,0:35:84.64:0,85,1151	0/0:31,0:31:85.07:0,85,1285	0/0:16,0:16:48.03:0,48,636	1/1:28,6:34:89.94:855,90,0	1/1:22,1:23:41.68:304,42,0	0/0:20,0:20:44.48:0,44,413	0/0:11,0:11:24.80:0,25,194	1/1:15,1:16:29.97:242,30,0	1/1:10,0:9:21.41:172,21,0	0/0:12,0:12:30.06:0,30,420	0/0:27,0:27:69.12:0,69,943	0/0:10,0:10:11.50:0,12,92	0/0:14,0:14:33.03:0,33,420	1/1:7,1:7:20.73:147,21,0	0/0:16,0:16:28.72:0,29,430	0/0:31,0:31:48.85:0,49,1029	0/0:23,0:23:54.10:0,54,808	1/1:13,0:13:25:227,25,0	1/1:9,0:9:26.72:197,27,0	1/1:12,0:12:17.79:136,18,0	0/0:22,0:22:60.41:0,60,466	0/0:31,0:31:71.28:0,71,1260	0/0:22,0:22:62.92:0,63,847	0/0:17,0:17:51:0,51,572
chr10	74497554	.	TTCTCTCTC	T	1777.36	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=3.281;DP=546;FS=0.584;HRun=0;HaplotypeScore=151.5300;InbreedingCoeff=0.5576;MQ=57.70;MQ0=8;MQRankSum=-4.346;QD=14.22;ReadPosRankSum=0.214;VQSLOD=2.8259;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:5.33:21,5,0	0/0:8,0:8:21.04:0,21,488	0/0:20,0:10:1.89:0,2,131	./.	0/0:36,0:37:69.18:0,69,1948	0/0:32,0:32:68.87:0,69,1733	0/0:17,0:17:33.11:0,33,927	0/0:43,0:42:61.96:0,62,679	0/1:22,0:21:25.72:26,0,58	1/1:15,1:17:27.06:453,27,0	1/1:6,4:10:24.08:468,24,0	0/1:15,0:15:32.75:33,0,47	0/1:17,0:14:40.05:40,0,122	0/0:13,0:13:27.09:0,27,925	0/0:27,0:27:45.09:0,45,1231	1/1:3,5:8:3.01:74,3,0	0/0:14,0:15:20.36:0,20,707	0/0:9,0:7:10.81:0,11,93	0/0:13,0:14:30.07:0,30,647	0/0:32,0:31:78.73:0,79,1548	0/0:23,0:23:60.17:0,60,1689	0/0:16,0:16:15.58:0,16,97	0/0:10,0:9:12.15:0,12,80	0/0:12,0:12:3.94:0,4,26	1/1:15,6:21:48.08:830,48,0	0/0:33,1:35:19.51:0,20,2616	0/0:25,0:23:41.22:0,41,1330	0/0:19,0:19:33.02:0,33,638
chr10	74497600	.	CAT	C	411.17	PASS	AB=0.873;AC=10;AF=0.179;AN=56;BaseQRankSum=4.476;DP=505;FS=0.746;HRun=0;HaplotypeScore=99.6415;InbreedingCoeff=0.0980;MQ=46.18;MQ0=35;MQRankSum=-3.565;QD=3.32;ReadPosRankSum=-1.970;VQSLOD=2.2245;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,2:20:53.13:53,0,463	0/0:2,0:2:6.02:0,6,111	0/0:45,0:4:4.81:0,5,16	0/0:73,0:8:5.80:0,6,83	0/0:18,0:18:54.13:0,54,967	0/0:18,1:19:21.76:0,22,706	0/0:17,0:17:22.03:0,22,713	0/1:9,7:15:94.32:275,0,94	0/1:15,3:17:57.91:58,0,66	0/0:12,0:12:16.44:0,16,450	0/0:13,0:13:36.02:0,36,543	0/1:10,2:12:11.42:36,0,11	0/1:18,2:17:18.79:19,0,168	0/0:21,0:21:19.28:0,19,753	0/0:21,0:21:54.15:0,54,773	0/0:10,0:10:24.96:0,25,317	0/0:10,0:9:27.06:0,27,390	1/1:7,2:8:3.01:40,3,0	0/0:16,0:16:30.03:0,30,599	0/0:20,0:19:52.27:0,52,745	0/1:14,0:13:59.42:59,0,451	0/1:4,2:6:0.02:0,0,0	0/0:13,1:13:11.94:0,12,110	0/1:8,0:8:0:0,0,0	0/0:20,0:20:21.21:0,21,483	0/0:24,0:23:66.08:0,66,1032	0/0:17,0:16:44.62:0,45,745	0/0:6,0:6:12.04:0,12,210
chr10	74497614	.	CTCAT	C	448.92	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=7.170;DP=505;FS=0.621;HRun=0;HaplotypeScore=115.8510;InbreedingCoeff=0.0350;MQ=47.06;MQ0=26;MQRankSum=-5.427;QD=2.69;ReadPosRankSum=-0.195;VQSLOD=2.2964;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:18:21.13:21,0,79	0/0:2,0:2:6.02:0,6,164	0/0:22,0:3:5.61:0,6,88	0/0:58,0:6:3.02:0,3,74	0/0:23,0:23:68.92:0,69,1269	0/0:21,0:21:49.61:0,50,1080	0/0:24,0:24:48.30:0,48,1130	0/1:23,0:22:47.44:185,0,47	0/1:13,0:13:35.90:36,0,56	0/1:14,0:14:14.65:15,0,160	0/0:14,0:13:13.28:0,13,243	1/1:14,0:14:6.30:57,6,0	0/1:24,0:21:86.36:121,0,86	0/0:20,0:20:48.16:0,48,1049	0/0:22,0:22:60.62:0,61,1336	0/1:13,0:13:5.60:17,0,6	0/0:12,0:12:27.87:0,28,496	1/1:3,6:9:0.14:36,0,0	0/0:13,0:12:11.14:0,11,487	0/0:24,0:24:55.09:0,55,1482	0/0:14,0:13:26.01:0,26,525	0/0:6,0:6:2.99:0,3,24	0/1:19,0:18:43.32:70,0,43	0/0:7,0:7:0:0,0,0	0/1:19,0:19:34.28:34,0,108	0/0:26,0:25:64.19:0,64,1106	0/0:19,0:18:31.95:0,32,829	0/0:8,0:8:18.06:0,18,282
chr10	74497618	.	TTCTCTC	T	1745.32	PASS	AB=0.596;AC=14;AF=0.250;AN=56;BaseQRankSum=8.280;DP=499;FS=15.020;HRun=0;HaplotypeScore=125.5020;InbreedingCoeff=0.5244;MQ=48.04;MQ0=24;MQRankSum=-4.707;QD=12.83;ReadPosRankSum=0.988;VQSLOD=2.1438;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:19:1.04:0,1,24	0/0:3,0:3:9.03:0,9,284	0/0:25,0:3:5.52:0,6,63	0/0:43,0:4:6.02:0,6,76	0/0:22,0:24:54.18:0,54,1521	0/0:17,0:21:45.15:0,45,1226	0/0:22,0:25:42.61:0,43,1242	0/0:22,0:21:40:0,40,461	1/1:5,9:14:18.02:336,18,0	0/1:4,1:13:50.69:59,0,51	0/1:9,4:14:34.37:116,0,34	1/1:6,8:14:12:209,12,0	1/1:11,12:21:32.70:646,33,0	0/0:17,0:18:45.13:0,45,1314	0/0:20,0:23:59.53:0,60,1806	0/1:0,2:13:3.91:120,0,4	0/0:14,0:15:29.11:0,29,634	0/0:11,0:11:8.17:0,8,111	0/0:11,0:12:27.09:0,27,643	0/0:24,0:25:60.20:0,60,1805	0/0:12,0:13:16.61:0,17,434	1/1:2,4:6:5.93:40,6,0	1/1:7,11:18:15.61:330,16,0	0/0:1,5:6:0:0,0,0	0/1:5,1:18:9.82:63,0,10	0/0:25,0:27:58.79:0,59,1616	0/0:18,0:17:41.31:0,41,1119	0/0:8,0:8:9.03:0,9,284
chr10	74499188	.	T	TA	514.20	PASS	AB=0.763;AC=4;AF=0.071;AN=56;BaseQRankSum=-3.344;DP=297;FS=8.423;HRun=10;HaplotypeScore=80.4098;InbreedingCoeff=0.2858;MQ=65.44;MQ0=1;MQRankSum=-0.737;QD=11.96;ReadPosRankSum=-3.610;VQSLOD=2.1003;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:44.94:0,45,369	0/0:2,0:2:3:0,3,25	0/0:10,0:7:3.01:0,3,53	0/0:8,0:6:0.27:0,0,43	0/0:9,0:10:26.01:0,26,203	0/0:12,0:12:29.76:0,30,235	0/0:10,0:10:14.98:0,15,123	0/1:9,16:25:13.81:466,0,14	0/0:8,0:8:20.97:0,21,172	0/0:11,0:12:22.98:0,23,178	0/0:8,0:8:23.97:0,24,197	0/0:6,0:6:11.91:0,12,91	0/0:7,0:7:14.98:0,15,123	0/0:11,0:11:26.97:0,27,221	0/0:14,0:14:35.95:0,36,295	0/1:10,1:11:5.19:5,0,163	0/0:20,0:20:53.86:0,54,436	1/1:4,3:7:15:148,15,0	0/0:10,0:11:28.90:0,29,218	0/0:14,0:14:32.96:0,33,271	0/0:13,0:13:23.97:0,24,197	0/0:1,0:1:3:0,3,25	0/0:5,0:5:14.79:0,15,106	0/0:12,0:12:32.96:0,33,271	0/0:10,0:10:23.86:0,24,186	0/0:14,0:14:35.64:0,36,282	0/0:12,0:12:23.82:0,24,182	0/0:3,0:2:5.99:0,6,49
chr10	74499205	.	AG	A	7716.18	PASS	AB=0.900;AC=54;AF=0.964;AN=56;BaseQRankSum=-2.624;DP=251;FS=2.403;HRun=3;HaplotypeScore=57.9824;InbreedingCoeff=0.0716;MQ=61.83;MQ0=6;MQRankSum=-1.467;QD=30.74;ReadPosRankSum=2.410;VQSLOD=4.6246;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:41.62:491,42,0	1/1:0,1:1:3.01:37,3,0	0/1:7,0:5:5.94:6,0,64	0/1:6,2:5:30.16:32,0,30	1/1:0,9:9:23.81:271,24,0	1/1:0,11:11:33.09:396,33,0	1/1:1,6:6:15.05:186,15,0	1/1:2,10:12:30.09:368,30,0	1/1:1,6:7:18.06:223,18,0	1/1:1,10:10:30.09:370,30,0	1/1:1,7:8:21.02:243,21,0	1/1:0,5:5:15.03:173,15,0	1/1:0,6:6:18.06:222,18,0	1/1:1,9:10:27.09:334,27,0	1/1:0,14:14:39.07:465,39,0	1/1:0,11:11:30.09:371,30,0	1/1:2,16:17:48.15:592,48,0	1/1:0,6:6:18.06:223,18,0	1/1:0,9:9:27.08:335,27,0	1/1:0,11:10:30.09:372,30,0	1/1:0,12:12:24.08:297,24,0	1/1:1,0:1:3.01:37,3,0	1/1:0,5:5:15.05:186,15,0	1/1:0,12:12:33.10:405,33,0	1/1:0,6:6:18.06:223,18,0	1/1:1,13:13:36.11:440,36,0	1/1:0,10:10:30.08:354,30,0	1/1:1,1:2:6.01:66,6,0
chr10	74499278	.	C	CGAGA	6821.06	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.309;DP=278;FS=61.937;HRun=0;HaplotypeScore=94.8485;InbreedingCoeff=0.4110;MQ=54.28;MQ0=113;MQRankSum=-5.805;QD=28.78;ReadPosRankSum=4.153;VQSLOD=2.3766;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,3:7:15.05:333,15,0	1/1:0,1:1:3.01:86,3,0	0/0:17,0:9:24.06:0,24,359	0/0:24,0:5:7.04:0,7,126	1/1:4,10:13:33.11:828,33,0	1/1:4,6:9:4.20:516,4,0	1/1:7,4:4:9.03:257,9,0	1/1:8,0:4:3.01:37,3,0	1/1:1,4:4:12.04:227,12,0	1/1:9,2:6:14.94:196,15,0	1/1:4,2:1:3.01:57,3,0	1/1:5,4:5:13.29:230,13,0	1/1:4,2:3:9.03:168,9,0	1/1:5,2:3:6.02:170,6,0	1/1:7,1:3:9.03:186,9,0	1/1:5,7:8:9.93:316,10,0	1/1:5,4:6:18.02:364,18,0	1/1:10,1:3:7.36:103,7,0	1/1:11,1:2:6.02:126,6,0	1/1:7,4:5:14.94:352,15,0	1/1:5,0:1:3.01:57,3,0	1/1:3,0:1:2.90:16,3,0	1/1:5,1:3:8.75:87,9,0	1/1:12,0:5:6.02:70,6,0	1/1:2,4:6:17.91:268,18,0	1/1:1,9:10:24.08:688,24,0	1/1:9,11:15:41.11:910,41,0	1/1:5,2:2:6.02:172,6,0
chr10	74499284	.	AAAG	A	989.78	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=-3.089;DP=291;FS=12.409;HRun=0;HaplotypeScore=94.6991;InbreedingCoeff=-0.0250;MQ=62.66;MQ0=121;MQRankSum=-1.737;QD=3.81;ReadPosRankSum=-2.102;VQSLOD=0.3537;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,2:7:11.87:156,12,0	0/0:1,0:1:2.94:0,3,18	0/0:18,0:10:19.20:0,19,268	0/1:27,0:9:4.52:5,0,64	0/1:15,0:13:77.36:77,0,83	0/1:11,0:9:30.36:30,0,182	0/1:11,0:4:2.86:3,0,13	1/1:7,1:4:5.69:57,6,0	1/1:7,0:5:11.15:60,11,0	1/1:9,0:5:5.96:44,6,0	1/1:6,0:1:2.80:13,3,0	1/1:9,0:5:7.95:61,8,0	1/1:6,0:3:8.67:48,9,0	0/1:8,0:3:40.07:40,0,47	0/1:8,0:3:29.81:61,0,30	1/1:12,1:8:12.99:114,13,0	0/1:10,0:6:67.62:68,0,83	1/1:11,0:3:7.05:60,7,0	0/1:12,0:3:12.42:16,0,12	0/1:11,0:5:19.99:20,0,92	0/0:5,0:1:3.01:0,3,61	0/1:4,0:2:0.20:0,0,0	1/1:6,0:3:2.80:13,3,0	1/1:9,4:4:2.97:20,3,0	1/1:8,0:6:7.57:51,8,0	0/1:10,0:10:22.45:22,0,113	0/1:22,0:15:99:108,0,131	0/0:7,0:2:5.90:0,6,36
chr10	74500144	.	ATTC	A	116.31	PASS	AC=8;AF=0.667;AN=12;BaseQRankSum=-1.309;DP=19;FS=15.563;HRun=0;HaplotypeScore=28.3941;MQ=165.58;MQ0=0;MQRankSum=-2.793;QD=23.26;ReadPosRankSum=2.793;VQSLOD=1.6207;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:6,0:3:9.03:0,9,135	0/0:7,0:5:12.04:0,12,241	./.	./.	1/1:0,1:1:3.01:35,3,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:38,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,2:2:6.02:72,6,0	1/1:0,1:1:3.01:56,3,0
chr10	74505270	.	TA	T	5510.28	PASS	AB=0.891;AC=28;AF=0.500;AN=56;BaseQRankSum=12.442;DP=523;FS=11.577;HRun=10;HaplotypeScore=51.8773;InbreedingCoeff=0.8294;MQ=69.83;MQ0=2;MQRankSum=-0.683;QD=18.81;ReadPosRankSum=-0.791;VQSLOD=4.5762;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:41.99:364,42,0	0/0:8,0:8:21.06:0,21,232	0/0:15,0:13:6.61:0,7,121	0/0:6,1:5:1.50:0,1,53	0/0:34,0:34:72.87:0,73,945	0/0:27,0:28:72.03:0,72,777	0/0:16,0:16:36.06:0,36,380	1/1:7,14:21:41.99:365,42,0	1/1:1,17:18:44.03:371,44,0	1/1:1,19:20:56.99:495,57,0	1/1:2,32:34:86.96:755,87,0	1/1:1,20:21:53.99:468,54,0	1/1:0,13:13:38.99:339,39,0	0/0:18,1:19:22.05:0,22,448	0/0:21,1:22:37.05:0,37,612	1/1:1,17:18:44.99:391,45,0	0/0:13,0:13:27.07:0,27,299	1/1:3,12:15:35.99:312,36,0	0/0:14,0:14:39.09:0,39,423	0/1:22,3:25:12:12,0,550	0/0:9,0:9:27.07:0,27,299	1/1:1,14:15:41.99:365,42,0	1/1:6,12:19:41.93:356,42,0	1/1:1,14:15:41.99:365,42,0	1/1:2,22:24:62.98:547,63,0	0/0:25,0:25:62.17:0,62,654	0/0:20,0:20:60.16:0,60,664	0/1:14,2:16:7:7,0,378
chr10	74505617	.	CT	C	1532.65	PASS	AB=0.789;AC=20;AF=0.357;AN=56;BaseQRankSum=5.439;DP=538;FS=0.891;HRun=14;HaplotypeScore=64.7230;InbreedingCoeff=0.6444;MQ=68.37;MQ0=2;MQRankSum=-0.236;QD=6.97;ReadPosRankSum=3.132;VQSLOD=2.6803;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,3:30:27.82:0,28,518	0/0:6,0:6:18:0,18,161	0/1:14,0:10:5.39:5,0,92	0/0:15,0:15:12.50:0,12,143	0/0:35,2:40:31.92:0,32,539	0/0:15,1:18:24.03:0,24,327	0/0:18,0:18:35.94:0,36,314	0/0:11,0:29:48.84:0,49,274	1/1:6,12:18:32.68:226,33,0	1/1:10,10:20:26.64:183,27,0	1/1:10,17:27:15.97:244,16,0	1/1:7,14:21:13.39:151,13,0	1/1:5,10:17:21.89:135,22,0	0/1:14,1:15:2.02:2,0,189	0/0:21,0:21:35.91:0,36,306	1/1:8,15:23:4.74:178,5,0	0/0:19,1:21:18.33:0,18,292	0/0:1,0:9:5.68:0,6,29	0/0:13,0:16:35.84:0,36,307	0/0:22,3:27:3.68:0,4,286	0/0:12,1:13:15.47:0,15,136	1/1:5,11:16:17.75:123,18,0	1/1:4,14:19:11.68:189,12,0	0/1:2,7:9:4.06:120,0,4	0/1:10,11:21:15.87:170,0,16	0/0:22,2:25:27.42:0,27,383	0/0:20,2:22:12.68:0,13,372	0/0:6,1:7:1.09:0,1,116
chr10	74506510	.	A	ACTT	1378.23	PASS	AB=0.779;AC=4;AF=0.071;AN=56;BaseQRankSum=-7.610;DP=487;FS=14.187;HRun=0;HaplotypeScore=79.7266;InbreedingCoeff=0.4592;MQ=69.27;MQ0=2;MQRankSum=0.661;QD=19.69;ReadPosRankSum=-2.157;VQSLOD=1.6324;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.08:0,60,818	0/0:10,0:10:21.06:0,21,310	0/0:9,0:8:5.98:0,6,88	0/1:11,0:7:1.62:2,0,60	0/0:21,0:21:51.42:0,51,601	0/0:22,0:22:54.56:0,55,765	0/0:13,0:12:27.07:0,27,378	1/1:14,26:39:79.92:1031,80,0	0/0:7,0:7:20.99:0,21,240	0/0:14,0:15:42.10:0,42,528	0/0:21,0:21:51.17:0,51,782	0/0:8,0:8:18.05:0,18,265	0/0:23,0:23:51.04:0,51,741	0/0:18,0:18:42.13:0,42,621	0/0:13,0:13:36.03:0,36,517	0/0:18,0:18:54.14:0,54,749	0/0:27,0:26:63.15:0,63,939	0/1:4,15:19:17.71:452,0,18	0/0:24,0:24:59.90:0,60,679	0/0:23,0:23:63.08:0,63,855	0/0:18,0:18:50.98:0,51,626	0/0:3,0:3:5.95:0,6,65	0/0:11,0:11:30.01:0,30,400	0/0:5,0:5:15.03:0,15,194	0/0:19,0:18:48.13:0,48,678	0/0:34,0:34:72.17:0,72,1029	0/0:18,0:19:39.12:0,39,596	0/0:13,0:13:36.11:0,36,545
chr10	74508995	.	C	CT	1132.75	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.635;DP=529;FS=5.084;HRun=5;HaplotypeScore=55.7216;InbreedingCoeff=0.9750;MQ=74.07;MQ0=1;MQRankSum=-1.387;QD=24.10;ReadPosRankSum=-3.309;VQSLOD=1.6754;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,1322	0/0:4,0:4:12.03:0,12,129	0/0:20,0:19:16.75:0,17,386	0/0:21,0:18:51.11:0,51,536	0/0:24,0:24:51.01:0,51,515	0/0:19,0:19:51.13:0,51,548	0/0:11,0:11:30.08:0,30,322	1/1:6,25:30:55.39:855,55,0	0/0:23,0:23:63.12:0,63,659	0/0:16,0:16:45.11:0,45,483	0/0:9,0:9:24.06:0,24,258	0/0:19,0:19:51.12:0,51,547	0/0:24,0:24:69.17:0,69,741	0/0:17,0:17:48.12:0,48,516	0/0:24,0:24:69.17:0,69,741	0/0:28,0:28:72.15:0,72,759	0/0:24,0:24:72.15:0,72,761	1/1:6,10:16:33.09:399,33,0	0/0:21,0:21:51.12:0,51,539	0/0:11,0:11:30.07:0,30,322	0/0:21,0:21:60.13:0,60,634	0/0:8,0:8:24.06:0,24,258	0/0:12,0:12:33.08:0,33,354	0/0:8,0:8:24.06:0,24,258	0/0:14,0:14:36.09:0,36,387	0/0:20,0:20:57.13:0,57,605	0/0:23,0:23:66.17:0,66,709	0/0:16,0:16:45.09:0,45,475
chr10	74511267	.	C	CT	1504.60	PASS	AB=0.900;AC=15;AF=0.268;AN=56;BaseQRankSum=-2.313;DP=596;FS=0.000;HRun=12;HaplotypeScore=70.4972;InbreedingCoeff=0.8316;MQ=70.84;MQ0=1;MQRankSum=-0.208;QD=11.40;ReadPosRankSum=-2.126;VQSLOD=2.7516;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,8:25:19.54:310,20,0	0/0:10,0:10:29.83:0,30,219	0/0:18,0:15:12.37:0,12,106	0/1:7,0:7:14.48:22,0,14	0/0:24,0:25:52.64:0,53,376	0/0:19,2:21:24.48:0,24,343	0/0:16,0:17:37.79:0,38,268	0/0:33,1:37:31.23:0,31,366	1/1:4,18:22:30.04:288,30,0	0/0:29,0:30:63.62:0,64,448	0/0:27,0:28:13.65:0,14,350	1/1:3,15:18:20.96:189,21,0	1/1:4,14:18:42.02:397,42,0	0/0:22,1:23:17.61:0,18,295	0/0:25,0:25:34.74:0,35,391	0/0:23,1:24:18.47:0,18,299	0/0:24,0:24:56.63:0,57,414	0/0:11,0:11:13.74:0,14,93	0/0:20,0:20:44.69:0,45,327	0/0:17,0:20:32.39:0,32,296	0/0:15,1:16:3.22:0,3,178	1/1:2,9:11:17.98:165,18,0	1/1:5,15:20:9.07:243,9,0	1/1:2,6:9:5.04:82,5,0	0/0:35,1:37:49.41:0,49,523	0/0:32,0:32:59.52:0,60,438	0/0:31,2:33:19.12:0,19,461	0/0:11,0:11:20.81:0,21,153
chr10	74512043	.	CCAGG	C	1087.53	PASS	AC=14;AF=0.304;AN=46;BaseQRankSum=5.757;DP=379;FS=18.021;HRun=0;HaplotypeScore=60.7388;InbreedingCoeff=0.7697;MQ=73.42;MQ0=2;MQRankSum=0.822;QD=10.99;ReadPosRankSum=1.521;VQSLOD=1.1380;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,2:19:6.02:93,6,0	0/0:6,0:6:9.03:0,9,211	./.	./.	0/0:6,0:6:3.01:0,3,70	0/0:5,0:5:3.01:0,3,67	0/0:30,0:30:33.11:0,33,766	./.	1/1:6,6:12:18.06:278,18,0	0/0:8,0:8:6.02:0,6,141	0/0:7,0:7:9.03:0,9,211	1/1:10,7:17:18.06:278,18,0	1/1:10,5:15:15.05:232,15,0	0/0:13,0:13:18.06:0,18,389	0/0:18,0:18:24.07:0,24,505	0/0:16,0:15:27.04:0,27,544	0/0:27,0:26:51.17:0,51,1166	0/0:3,0:8:15.02:0,15,230	./.	0/0:9,0:9:6.02:0,6,138	0/0:16,0:16:15.03:0,15,304	1/1:7,3:10:9.03:139,9,0	1/1:6,2:8:3.01:46,3,0	1/1:14,4:18:12.04:186,12,0	0/0:17,0:17:12.04:0,12,280	./.	0/0:25,0:25:24.07:0,24,488	0/0:4,0:4:9.03:0,9,211
chr10	74512790	.	TTA	T	2033.36	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.213;DP=457;FS=1.115;HRun=0;HaplotypeScore=56.9844;InbreedingCoeff=0.8613;MQ=68.34;MQ0=0;MQRankSum=-0.033;QD=28.24;ReadPosRankSum=-4.153;VQSLOD=3.4651;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:30.10:0,30,506	0/0:5,0:5:12.04:0,12,202	0/0:13,0:13:24.05:0,24,315	0/0:2,0:1:3.01:0,3,51	0/0:31,0:31:87.30:0,87,1460	0/0:17,0:17:45.15:0,45,759	0/0:10,0:10:27.05:0,27,400	1/1:6,39:45:99:1460,117,0	0/0:9,0:9:18.06:0,18,304	0/0:26,0:26:75.26:0,75,1256	0/0:15,0:15:45.14:0,45,734	0/0:10,0:10:21.07:0,21,354	0/0:19,0:19:48.16:0,48,810	0/0:10,0:10:30.10:0,30,500	0/0:14,0:14:36.11:0,36,581	0/0:23,0:23:60.21:0,60,1012	0/0:17,0:17:42.14:0,42,708	1/1:7,20:27:54.17:694,54,0	0/0:19,0:19:30.09:0,30,482	0/0:23,0:23:54.18:0,54,911	0/0:10,0:10:18.06:0,18,304	0/0:6,0:6:9.03:0,9,152	0/0:10,0:10:27.09:0,27,455	0/0:7,0:7:18.06:0,18,304	0/0:14,0:14:39.13:0,39,653	0/0:23,0:23:54.18:0,54,911	0/0:32,0:32:87.28:0,87,1440	0/0:6,0:6:18.06:0,18,304
chr10	74514431	.	T	TA	3101.74	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-10.361;DP=490;FS=4.977;HRun=11;HaplotypeScore=55.9383;InbreedingCoeff=0.8924;MQ=74.62;MQ0=0;MQRankSum=0.671;QD=18.35;ReadPosRankSum=0.243;VQSLOD=4.6204;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:62.75:0,63,488	0/0:8,0:8:16.96:0,17,122	0/1:15,0:13:12.92:13,0,108	0/0:11,0:9:3.82:0,4,18	0/0:27,0:27:59.73:0,60,464	0/0:20,0:20:50.78:0,51,395	0/0:13,0:13:35.83:0,36,273	0/0:4,0:39:69.72:0,70,203	1/1:0,10:10:24.05:244,24,0	1/1:6,19:26:36.68:520,37,0	1/1:2,15:17:45.05:445,45,0	1/1:2,12:14:30.06:302,30,0	1/1:7,10:17:24.05:243,24,0	0/0:15,0:15:35.83:0,36,279	0/0:22,0:24:57.86:0,58,430	1/1:2,14:16:30.06:305,30,0	0/0:12,0:12:17.92:0,18,139	0/0:2,0:19:28.25:0,28,83	0/0:24,0:25:61.79:0,62,470	0/0:14,0:14:40.89:0,41,308	0/0:10,0:11:28.88:0,29,210	1/1:0,8:8:21.04:213,21,0	1/1:4,17:21:42.08:426,42,0	1/1:1,3:4:9.02:91,9,0	1/1:4,17:21:51.10:518,51,0	0/0:22,0:25:68.87:0,69,505	0/0:25,0:25:68.69:0,69,529	0/0:10,0:10:20.87:0,21,162
chr10	74516634	.	C	CG	814.97	PASS	AB=0.941;AC=9;AF=0.161;AN=56;BaseQRankSum=2.345;DP=454;FS=8.827;HRun=4;HaplotypeScore=75.7518;InbreedingCoeff=0.5205;MQ=56.90;MQ0=12;MQRankSum=-1.717;QD=7.55;ReadPosRankSum=-1.384;VQSLOD=-0.3577;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:42.20:0,42,403	0/0:7,0:6:11.94:0,12,107	0/1:37,0:7:4.89:5,0,96	0/0:28,0:9:11.30:0,11,65	0/0:15,0:14:23.19:0,23,195	0/0:14,0:14:15.46:0,15,132	0/0:13,0:13:11.99:0,12,112	0/0:28,0:27:53.96:0,54,506	0/1:10,0:9:16.58:17,0,49	1/1:16,2:18:38.23:327,38,0	1/1:8,6:14:23.81:218,24,0	0/0:9,0:9:5.84:0,6,55	0/0:13,0:13:17.83:0,18,149	0/0:13,0:13:14.99:0,15,137	0/0:17,0:16:27.87:0,28,247	1/1:12,3:15:32.83:316,33,0	0/0:33,0:33:43.83:0,44,432	0/0:17,0:16:25.53:0,26,252	0/0:19,0:19:32.96:0,33,303	0/0:13,0:13:18:0,18,175	0/0:7,0:6:9:0,9,83	0/0:8,0:8:23.03:0,23,199	0/0:6,1:7:7.41:0,7,102	0/0:14,0:13:11.69:0,12,90	0/1:11,3:13:10.31:86,0,10	0/0:12,0:12:0.57:0,1,126	0/0:18,0:17:27.24:0,27,277	0/0:8,0:8:14.98:0,15,138
chr10	74516657	.	C	CA	1118.02	PASS	AB=0.844;AC=25;AF=0.446;AN=56;BaseQRankSum=3.157;DP=488;FS=13.642;HRun=12;HaplotypeScore=60.7969;InbreedingCoeff=0.3933;MQ=61.36;MQ0=9;MQRankSum=0.645;QD=4.78;ReadPosRankSum=0.343;VQSLOD=0.4012;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,17:25:23.66:279,0,24	0/1:8,1:8:11.31:11,0,88	0/0:34,0:10:1.23:0,1,51	0/1:26,0:10:7.05:7,0,56	0/1:15,1:16:3.93:4,0,131	0/0:19,1:21:14.44:0,14,259	0/0:10,0:11:16.91:0,17,115	0/0:44,0:44:59.17:0,59,434	1/1:7,0:6:8.29:42,8,0	1/1:6,0:18:19.90:115,20,0	1/1:6,1:12:16.36:97,16,0	1/1:6,6:12:8.05:74,8,0	1/1:5,6:11:3.89:31,4,0	0/0:16,0:16:4.08:0,4,178	0/0:10,0:9:23.70:0,24,166	1/1:9,0:10:14.50:83,15,0	0/0:35,0:35:53.22:0,53,393	0/1:20,3:23:59.82:60,0,160	0/0:18,0:18:20.66:0,21,153	0/1:14,2:16:19.53:20,0,201	0/0:5,0:5:5.90:0,6,44	0/1:5,4:9:3.89:118,0,4	1/1:1,6:7:12.02:117,12,0	1/1:4,8:11:9.01:88,9,0	1/1:12,1:19:1.67:160,2,0	0/0:24,0:24:24.22:0,24,308	0/0:22,0:21:35.08:0,35,251	0/0:13,0:13:20.36:0,20,152
chr10	74518193	.	GATT	G	4547.07	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=5.873;DP=486;FS=16.143;HRun=0;HaplotypeScore=89.1550;InbreedingCoeff=0.8001;MQ=69.45;MQ0=1;MQRankSum=-4.449;QD=29.15;ReadPosRankSum=1.269;VQSLOD=3.7435;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:42.09:720,42,0	0/0:9,0:9:27.08:0,27,552	0/0:25,0:15:25.44:0,25,275	0/0:5,0:4:5.53:0,6,108	0/0:24,0:24:69.18:0,69,1446	0/0:22,0:22:65.97:0,66,1340	0/0:6,0:6:18.05:0,18,356	0/1:38,0:38:53.89:319,0,54	1/1:0,12:12:33.11:598,33,0	0/0:22,0:22:64.30:0,64,412	0/0:26,0:26:57.28:0,57,425	1/1:0,15:15:36.12:649,36,0	1/1:0,19:20:48.16:872,48,0	0/0:18,0:18:54.11:0,54,1015	0/0:18,0:18:54.14:0,54,1160	0/0:13,0:13:32.19:0,32,194	0/0:18,0:18:26.73:0,27,811	0/1:18,0:18:21.68:139,0,22	0/0:23,0:23:69.21:0,69,1435	0/0:23,0:23:69.21:0,69,1560	0/0:4,0:4:12.02:0,12,244	1/1:0,9:9:27.09:481,27,0	1/1:0,9:9:23.87:384,24,0	1/1:0,13:13:20.88:385,21,0	0/0:25,0:25:52.79:0,53,322	0/0:12,0:12:33.01:0,33,655	0/0:23,0:23:69.17:0,69,1401	0/0:14,0:14:42.14:0,42,981
chr10	74518194	.	ATT	A	3604.93	PASS	AB=0.871;AC=28;AF=0.500;AN=56;BaseQRankSum=12.725;DP=487;FS=5.311;HRun=12;HaplotypeScore=83.7512;InbreedingCoeff=0.8465;MQ=70.29;MQ0=1;MQRankSum=-1.794;QD=13.20;ReadPosRankSum=2.268;VQSLOD=2.5329;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:37:183,37,0	0/0:9,0:9:20.90:0,21,283	0/0:24,0:15:26.40:0,26,194	0/0:5,0:4:2.92:0,3,35	0/0:21,0:24:55.97:0,56,790	0/0:21,0:22:52.88:0,53,732	0/0:5,0:6:14.54:0,15,188	1/1:6,0:38:82.21:349,82,0	1/1:12,0:12:31.08:147,31,0	1/1:3,19:22:57.09:580,57,0	1/1:3,23:26:69.12:695,69,0	1/1:15,0:15:34.01:165,34,0	1/1:20,0:20:45.32:216,45,0	0/0:18,0:18:39.10:0,39,560	0/0:17,0:17:45.14:0,45,650	1/1:1,12:13:30.06:305,30,0	0/1:14,1:18:11.95:12,0,410	1/1:4,0:18:32.92:142,33,0	0/0:23,0:23:58.48:0,58,808	0/0:23,0:23:60.20:0,60,886	0/0:4,0:4:9.03:0,9,134	1/1:9,0:9:25.60:127,26,0	1/1:9,0:9:19.52:97,20,0	1/1:14,0:14:19.83:95,20,0	1/1:2,23:25:48:488,48,0	0/1:11,1:12:3.43:3,0,330	0/0:24,0:24:60.18:0,60,851	0/0:13,0:14:41.63:0,42,589
chr10	74520699	.	GA	G	2195.76	PASS	AB=0.795;AC=27;AF=0.482;AN=56;BaseQRankSum=10.358;DP=421;FS=10.854;HRun=13;HaplotypeScore=56.5266;InbreedingCoeff=0.5248;MQ=63.49;MQ0=6;MQRankSum=2.869;QD=8.54;ReadPosRankSum=2.596;VQSLOD=1.5976;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,16:22:38.70:284,39,0	0/1:6,1:7:3.93:4,0,118	0/0:26,0:10:7.07:0,7,119	0/1:22,0:8:6.24:6,0,49	0/0:13,0:14:21.45:0,21,226	0/0:15,0:15:39.04:0,39,366	0/0:9,0:14:35.39:0,35,285	1/1:7,18:26:41.53:291,42,0	0/1:7,10:17:25.51:164,0,26	1/1:2,15:17:20.58:282,21,0	1/1:2,13:15:32.73:241,33,0	1/1:1,7:8:14.91:109,15,0	0/1:6,10:17:27.51:134,0,28	0/0:11,0:11:21.03:0,21,204	0/0:20,1:21:20.14:0,20,349	1/1:5,12:18:31.82:225,32,0	0/1:22,5:27:27.76:28,0,354	1/1:2,11:13:26.77:194,27,0	0/1:12,0:12:0.87:1,0,144	0/0:12,1:14:10.97:0,11,251	0/0:13,0:13:32.97:0,33,309	1/1:0,4:4:11.93:88,12,0	1/1:2,5:8:16.07:113,16,0	1/1:4,8:13:6.41:140,6,0	0/1:4,6:10:9.26:95,0,9	0/0:16,1:17:11.12:0,11,262	0/0:12,0:12:24.03:0,24,229	0/0:6,0:6:18.03:0,18,175
chr10	74523162	.	GAC	G	1790.77	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=6.308;DP=811;FS=9.626;HRun=0;HaplotypeScore=161.1067;InbreedingCoeff=0.6865;MQ=52.21;MQ0=22;MQRankSum=-1.384;QD=16.74;ReadPosRankSum=-3.236;VQSLOD=2.1488;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,1:40:24.66:0,25,687	0/0:9,0:9:27.09:0,27,494	0/0:30,0:14:37.25:0,37,487	0/0:51,0:18:36.98:0,37,519	0/0:31,0:30:78.03:0,78,1249	0/0:17,0:17:43.81:0,44,718	0/0:20,0:20:51.16:0,51,835	1/1:5,40:40:99:1337,105,0	0/0:24,0:23:48.98:0,49,554	0/1:47,0:47:99:168,0,1182	0/0:17,0:17:5.73:0,6,458	0/0:20,0:20:38.87:0,39,627	0/0:31,0:30:58.83:0,59,688	0/0:31,0:31:87.28:0,87,1496	0/0:25,0:25:69.24:0,69,1222	0/0:45,0:43:15.28:0,15,1056	0/0:27,0:27:78.18:0,78,1361	1/1:2,12:15:6.25:406,6,0	0/0:35,0:27:73.89:0,74,1017	0/0:22,0:22:52.58:0,53,873	0/0:38,0:38:99:0,108,1839	0/0:20,0:20:39.73:0,40,311	0/0:29,0:28:40.59:0,41,612	0/0:28,0:26:23.56:0,24,321	0/0:26,2:27:38.34:0,38,524	0/0:40,0:40:99:0,117,1936	0/0:33,0:33:84.71:0,85,1479	0/0:12,0:12:33.10:0,33,555
chr10	74523164	.	C	CACAGACAG	4928.63	PASS	AB=1.000;AC=23;AF=0.426;AN=54;BaseQRankSum=10.253;DP=832;FS=7.005;HRun=0;HaplotypeScore=233.6117;InbreedingCoeff=0.8857;MQ=51.88;MQ0=22;MQRankSum=-7.752;QD=12.74;ReadPosRankSum=0.786;VQSLOD=3.0909;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,18:39:9.03:353,9,0	0/0:9,0:9:27.09:0,27,639	0/0:29,0:15:15.04:0,15,206	0/0:49,0:16:11.62:0,12,122	0/0:33,0:32:50.41:0,50,1019	0/0:18,0:18:31.80:0,32,664	0/0:20,0:20:30.10:0,30,644	1/1:43,0:40:62.98:751,63,0	1/1:10,0:28:21.05:309,21,0	1/1:27,0:47:86.59:1452,87,0	1/1:10,0:21:21.07:377,21,0	1/1:15,0:22:21.05:239,21,0	1/1:15,0:32:21.07:402,21,0	0/0:30,0:30:57.20:0,57,1326	0/0:27,0:27:60.17:0,60,1110	1/1:27,0:43:42.12:611,42,0	0/0:28,0:28:69.12:0,69,1408	0/1:14,0:14:68.03:68,0,84	0/0:36,0:28:29.15:0,29,651	0/0:20,0:21:42.13:0,42,885	0/0:39,0:39:84.41:0,84,1477	./.	1/1:17,0:32:18.15:169,18,0	1/1:18,0:28:6.47:60,6,0	1/1:17,0:27:12.02:137,12,0	0/0:41,0:41:84.16:0,84,1602	0/0:31,0:33:58.88:0,59,1180	0/0:11,0:11:24.08:0,24,607
chr10	74524836	.	GCGCTCTCTCT	G	1074.39	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.261;DP=552;FS=14.897;HRun=0;HaplotypeScore=166.7921;InbreedingCoeff=0.1473;MQ=73.43;MQ0=22;MQRankSum=-3.385;QD=10.04;ReadPosRankSum=-2.241;VQSLOD=1.6089;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,7:25:37.25:316,37,0	0/0:11,0:11:32.92:0,33,849	0/0:42,0:19:45.30:0,45,605	0/0:50,0:33:47.66:0,48,639	0/0:20,0:19:54.94:0,55,2001	0/0:21,0:21:57.10:0,57,1749	0/0:25,0:25:66.10:0,66,2334	0/1:30,0:29:99:472,0,486	0/0:14,0:11:8.84:0,9,56	0/1:14,0:13:99:202,0,148	0/0:10,0:10:13.52:0,14,71	0/1:15,0:15:42.88:43,0,72	0/1:13,0:13:36.75:72,0,37	0/0:19,0:19:44.81:0,45,1335	0/0:23,0:22:59.84:0,60,2274	0/0:17,0:17:32.59:0,33,256	0/0:25,0:24:71.99:0,72,2081	0/1:9,0:9:99:106,0,186	0/0:13,0:13:38.95:0,39,802	0/0:11,0:11:26.96:0,27,819	0/0:36,0:34:80.83:0,81,2259	0/0:13,0:13:14.89:0,15,110	0/0:19,0:19:7.87:0,8,114	0/0:24,0:24:6.40:0,6,50	0/0:11,0:7:10.61:0,11,45	0/0:15,0:15:44.95:0,45,1045	0/0:14,0:14:30:0,30,749	0/0:12,0:9:26.84:0,27,496
chr10	74524838	.	GCTCTCTCTCTCT	G	413.35	PASS	AB=0.933;AC=9;AF=0.167;AN=54;BaseQRankSum=4.185;DP=549;FS=0.000;HRun=0;HaplotypeScore=183.1320;InbreedingCoeff=0.4488;MQ=71.66;MQ0=24;MQRankSum=-4.841;QD=4.98;ReadPosRankSum=-0.546;VQSLOD=2.1789;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:15.73:0,16,129	0/0:12,0:12:24.08:0,24,1012	0/0:41,0:18:19.85:0,20,377	0/0:49,0:32:29.27:0,29,613	0/0:20,0:19:40.02:0,40,2087	0/0:21,0:21:42.14:0,42,1804	0/0:25,0:24:56.98:0,57,2583	0/0:29,0:28:30.10:0,30,1120	./.	1/1:9,4:13:9.88:395,10,0	1/1:4,5:10:2.07:19,2,0	0/0:10,0:16:2.65:0,3,30	0/1:14,0:14:55.29:72,0,55	0/0:17,0:17:30.09:0,30,1395	0/0:24,0:22:45.15:0,45,2407	0/1:12,3:16:13.94:14,0,58	0/0:26,0:25:57.18:0,57,2366	0/0:8,0:8:6.02:0,6,310	0/0:13,0:13:15.05:0,15,718	0/0:10,0:10:18.06:0,18,859	0/0:37,0:34:51.14:0,51,2354	0/0:13,0:13:0:0,0,0	0/1:18,0:18:2.01:2,0,33	0/0:21,0:23:0.87:0,1,2	1/1:7,3:7:5.93:40,6,0	0/0:15,0:15:30.10:0,30,1107	0/0:15,0:15:21.07:0,21,816	0/0:12,0:9:12.04:0,12,438
chr10	74524861	.	CTCTCTCTCTCTCCACA	C	482.79	PASS	AB=0.917;AC=10;AF=0.179;AN=56;BaseQRankSum=4.415;DP=509;FS=1.037;HRun=0;HaplotypeScore=178.6144;InbreedingCoeff=0.2296;MQ=51.47;MQ0=40;MQRankSum=-4.101;QD=4.09;ReadPosRankSum=-0.267;VQSLOD=2.5276;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:19.21:0,19,159	0/1:12,0:12:9.07:9,0,1269	0/0:18,0:6:16.60:0,17,367	0/0:24,0:13:23.88:0,24,592	0/0:20,0:19:43.03:0,43,2161	0/0:21,0:21:31.96:0,32,2009	0/0:25,0:22:59.25:0,59,2641	0/0:16,0:14:33.11:0,33,1182	0/0:15,0:12:1.36:0,1,3	0/1:12,0:12:99:367,0,246	1/1:11,0:11:2.21:19,2,0	0/1:15,3:18:13.86:14,0,108	0/1:14,1:15:52.68:157,0,53	0/0:16,0:16:42.13:0,42,1778	0/0:25,0:22:57.20:0,57,3064	0/1:12,0:15:5.21:5,0,142	0/0:24,0:22:63.18:0,63,2764	0/0:7,0:7:17.09:0,17,494	0/0:12,0:9:24.08:0,24,911	0/0:14,0:12:28.65:0,29,1104	0/0:36,0:29:58.41:0,58,2688	0/1:15,0:15:0:0,0,0	0/0:22,0:20:0.39:0,0,34	0/0:27,0:27:2.34:0,2,6	1/1:15,0:13:5.47:39,5,0	0/0:18,0:16:48.16:0,48,1583	0/0:19,0:18:26.95:0,27,995	0/0:7,0:4:12.04:0,12,438
chr10	74524865	.	CTCTCTCTCCACA	C	524.97	PASS	AB=0.912;AC=9;AF=0.161;AN=56;BaseQRankSum=4.697;DP=491;FS=7.514;HRun=0;HaplotypeScore=153.1779;InbreedingCoeff=0.3414;MQ=48.12;MQ0=37;MQRankSum=-4.457;QD=5.20;ReadPosRankSum=-0.057;VQSLOD=1.7956;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:6.09:0,6,73	0/1:11,0:11:12.08:12,0,938	0/0:12,0:6:16.22:0,16,189	0/0:18,0:8:13.26:0,13,250	0/0:21,0:20:45.63:0,46,1511	0/0:22,0:22:10.68:0,11,1375	0/0:27,0:24:65.36:0,65,1836	0/0:15,0:13:27.05:0,27,794	0/0:6,10:13:1.36:0,1,3	0/1:14,0:12:99:193,0,227	0/0:12,0:11:0.47:0,0,1	0/1:16,0:17:58.15:91,0,58	1/1:3,10:14:14.82:275,15,0	0/0:16,0:16:40.01:0,40,1225	0/0:25,0:23:57.20:0,57,2215	0/0:15,0:15:8.26:0,8,92	0/0:21,0:19:54.14:0,54,1970	0/1:9,0:9:6.09:6,0,375	0/0:12,0:9:24.07:0,24,656	0/0:14,0:12:28.34:0,28,738	0/0:35,0:27:52.05:0,52,1862	0/1:6,10:16:0:0,0,0	1/1:8,12:18:3.48:77,3,0	0/0:11,17:27:1.49:0,1,5	0/0:15,0:13:0.46:0,0,1	0/0:17,0:15:42.13:0,42,1022	0/0:20,0:19:29.61:0,30,674	0/0:6,0:4:12.04:0,12,295
chr10	74524873	.	C	CA	141.61	PASS	AB=0.914;AC=12;AF=0.222;AN=54;BaseQRankSum=6.033;DP=494;FS=11.887;HRun=0;HaplotypeScore=107.8108;InbreedingCoeff=0.3043;MQ=43.91;MQ0=34;MQRankSum=-1.871;QD=0.94;ReadPosRankSum=-2.972;VQSLOD=0.6752;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,1:29:6.03:17,6,0	0/0:11,0:11:32.57:0,33,344	1/1:3,0:2:3:29,3,0	0/0:4,0:3:6.02:0,6,67	0/0:22,0:20:42.31:0,42,434	0/0:21,0:21:43.86:0,44,425	0/0:28,0:25:31.29:0,31,574	0/0:15,0:13:36.08:0,36,455	1/1:14,0:14:0.47:1,0,0	0/1:16,1:16:81.15:81,0,169	./.	0/0:15,0:17:5.20:0,5,30	0/0:15,0:14:10.62:0,11,54	0/0:19,0:18:30.14:0,30,449	0/0:25,0:23:53.55:0,54,629	0/1:14,3:17:4.24:68,0,4	0/0:21,0:19:36.18:0,36,579	0/0:10,0:8:17.98:0,18,183	0/0:10,0:9:11.29:0,11,224	0/1:14,1:14:57.06:57,0,152	0/0:39,0:28:31.19:0,31,406	0/1:17,0:17:0:0,0,1	0/0:21,0:19:3:0,3,25	0/0:29,0:28:0:0,0,1	0/1:12,4:15:0.05:1,0,0	0/1:19,0:17:10.81:11,0,341	0/0:18,0:17:15.96:0,16,175	0/0:1,0:1:3.01:0,3,40
chr10	74524927	.	T	TAT	1565.27	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.152;DP=582;FS=11.279;HRun=0;HaplotypeScore=100.1503;InbreedingCoeff=0.9003;MQ=64.04;MQ0=14;MQRankSum=1.539;QD=28.46;ReadPosRankSum=-2.556;VQSLOD=3.7856;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:41.40:0,41,553	0/0:10,0:10:27.08:0,27,335	0/0:22,0:15:26.74:0,27,270	0/0:15,0:11:26.95:0,27,276	0/0:18,0:17:23:0,23,366	0/0:20,0:20:7.07:0,7,530	0/0:21,0:20:60.01:0,60,690	1/1:8,28:36:84.26:1286,84,0	0/0:12,0:12:24.01:0,24,271	0/0:23,0:22:50.34:0,50,619	0/0:20,0:20:44.61:0,45,534	0/0:23,0:23:35.98:0,36,422	0/0:24,0:24:53.62:0,54,610	0/0:22,0:21:54.11:0,54,658	0/0:25,0:24:57.13:0,57,703	0/0:16,0:16:41.23:0,41,483	0/0:26,0:24:48.15:0,48,618	1/1:18,0:17:38.23:401,38,0	0/0:24,0:22:54.14:0,54,685	0/0:17,0:16:23.43:0,23,347	0/0:32,0:31:68.94:0,69,800	0/0:13,0:12:18.02:0,18,213	0/0:21,0:18:41.98:0,42,460	0/0:27,0:26:35.54:0,36,363	0/0:14,0:14:23.86:0,24,273	0/0:18,0:17:35.81:0,36,421	0/0:21,0:21:47.52:0,48,552	0/0:5,0:5:6.02:0,6,78
chr10	74526824	.	A	AGTTT	7432.74	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-11.625;DP=630;FS=6.614;HRun=0;HaplotypeScore=96.9243;InbreedingCoeff=0.9992;MQ=85.00;MQ0=0;MQRankSum=-4.103;QD=74.33;ReadPosRankSum=1.061;VQSLOD=6.9717;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.12:0,66,1083	0/0:10,0:10:30.09:0,30,529	0/0:19,0:19:48.09:0,48,827	0/0:22,0:22:45.08:0,45,723	0/0:43,0:43:99:0,126,2224	0/0:27,0:27:75.26:0,75,1400	0/0:17,0:17:48.16:0,48,896	0/0:26,0:26:72.24:0,72,1312	0/0:16,0:16:48.15:0,48,865	1/1:6,28:35:99:2672,102,0	1/1:4,25:31:87.30:2207,87,0	0/0:24,0:24:63.19:0,63,1114	0/0:29,0:29:78.22:0,78,1420	0/0:19,0:19:51.17:0,51,952	0/0:27,0:27:81.26:0,81,1469	1/1:1,11:12:33.11:880,33,0	0/0:24,0:24:69.24:0,69,1277	0/0:18,0:18:30.37:0,30,769	0/0:24,0:24:66.20:0,66,1147	0/0:25,0:25:75.24:0,75,1369	0/0:18,0:18:48.16:0,48,896	0/0:27,0:27:78.27:0,78,1456	0/0:17,0:17:51.17:0,51,952	0/0:9,0:9:27.09:0,27,504	1/1:2,20:22:63.22:1674,63,0	0/0:21,0:21:63.22:0,63,1172	0/0:36,0:35:96.33:0,96,1775	0/0:10,0:10:30.10:0,30,560
chr10	74527143	.	CT	C	1413.13	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.253;DP=593;FS=1.595;HRun=10;HaplotypeScore=69.4746;InbreedingCoeff=0.9562;MQ=64.50;MQ0=0;MQRankSum=-3.076;QD=19.36;ReadPosRankSum=-3.389;VQSLOD=3.2159;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:63.15:0,63,686	0/0:12,0:12:27.07:0,27,299	0/0:11,0:11:9.02:0,9,100	0/0:9,0:7:15.04:0,15,165	0/0:48,0:48:99:0,124,1352	0/0:21,0:21:57.15:0,57,623	0/0:12,0:12:30.08:0,30,332	1/1:8,36:44:77.77:905,78,0	0/0:17,0:17:45.12:0,45,498	0/0:30,0:30:64.93:0,65,686	0/0:28,0:28:43.57:0,44,639	0/0:18,0:18:45.12:0,45,498	0/0:16,0:16:39.06:0,39,418	0/0:25,1:26:46.12:0,46,721	0/0:27,0:28:55.11:0,55,818	0/0:9,0:9:27.07:0,27,296	0/0:23,0:23:63.17:0,63,697	1/1:4,24:29:73.73:630,74,0	0/0:20,0:20:51.10:0,51,539	0/0:24,0:24:54.12:0,54,581	0/0:16,1:17:36.10:0,36,398	0/0:14,0:14:30.08:0,30,332	0/0:10,0:10:24.06:0,24,265	0/0:18,0:18:45.12:0,45,497	0/0:26,0:28:59.81:0,60,610	0/0:21,0:21:42.10:0,42,451	0/0:24,1:25:49.10:0,49,747	0/0:10,0:10:17.67:0,18,199
chr10	74527826	.	T	TA	1061.80	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.952;DP=529;FS=16.092;HRun=11;HaplotypeScore=52.4398;InbreedingCoeff=0.8590;MQ=62.51;MQ0=1;MQRankSum=-1.554;QD=16.85;ReadPosRankSum=-0.991;VQSLOD=2.4900;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:17:40.89:0,41,308	0/0:6,0:6:11.95:0,12,93	0/0:10,0:8:8.67:0,9,54	0/0:8,0:5:5.89:0,6,40	0/0:35,0:36:86.50:0,86,676	0/0:15,0:15:35.86:0,36,279	0/0:6,0:6:14.94:0,15,116	1/1:16,25:41:58.93:733,59,0	0/0:17,0:19:48.88:0,49,360	0/0:25,0:28:74.84:0,75,552	0/0:14,0:14:29.85:0,30,230	0/0:19,0:20:52.82:0,53,398	0/0:22,0:23:40.89:0,41,446	0/0:23,0:23:65.13:0,65,494	0/0:21,0:21:61.80:0,62,468	0/0:23,0:24:70.77:0,71,540	0/0:25,0:25:53.27:0,53,402	1/1:3,18:21:11.89:445,12,0	0/0:18,0:19:49.17:0,49,354	0/0:13,0:13:29.87:0,30,232	0/0:6,0:6:11.93:0,12,90	0/0:8,0:8:14.93:0,15,116	0/0:20,0:20:41.77:0,42,319	0/0:8,0:8:20.87:0,21,158	0/0:25,0:25:62.72:0,63,488	0/0:23,0:24:46.04:0,46,338	0/0:25,0:26:55.77:0,56,421	0/0:22,0:22:50.75:0,51,394
chr10	74530464	.	AACACACACACACACAC	A	2209.86	PASS	AB=0.867;AC=13;AF=0.241;AN=54;BaseQRankSum=5.739;DP=567;FS=2.990;HRun=0;HaplotypeScore=220.3254;InbreedingCoeff=0.7462;MQ=69.30;MQ0=15;MQRankSum=-6.049;QD=14.83;ReadPosRankSum=0.055;VQSLOD=2.3697;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:24.08:0,24,1492	0/0:8,0:8:15.05:0,15,940	./.	0/0:35,0:22:3.31:0,3,15	0/0:13,0:16:24.07:0,24,1482	0/0:10,0:10:15.05:0,15,808	0/0:20,0:19:6.02:0,6,324	0/0:19,0:17:12.03:0,12,290	1/1:10,5:15:9.03:393,9,0	0/0:19,0:19:20.27:0,20,412	0/1:22,0:26:16.69:17,0,220	1/1:13,6:21:15.05:617,15,0	1/1:13,5:18:5.83:261,6,0	0/0:24,0:24:24.08:0,24,1443	0/0:28,0:28:36.12:0,36,2313	0/0:10,0:18:12.62:0,13,102	0/0:17,0:17:36.12:0,36,2327	0/0:9,0:14:27.09:0,27,1068	0/0:13,0:13:15.83:0,16,516	0/0:13,0:16:30.10:0,30,1810	0/0:38,0:39:52.06:0,52,2635	1/1:20,9:30:18.06:736,18,0	1/1:9,4:13:6.02:262,6,0	1/1:24,1:26:6:91,6,0	0/0:12,0:18:19.16:0,19,275	0/0:19,0:19:34.16:0,34,1673	0/0:20,0:20:26.37:0,26,1714	0/0:7,0:7:18.06:0,18,1072
chr10	74532536	.	A	AT	1498.41	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.985;DP=702;FS=4.666;HRun=6;HaplotypeScore=64.8931;InbreedingCoeff=0.9838;MQ=77.53;MQ0=0;MQRankSum=-3.119;QD=31.22;ReadPosRankSum=-4.075;VQSLOD=2.5196;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.16:0,69,704	0/0:4,0:4:12.03:0,12,122	0/0:12,0:12:32.65:0,33,308	0/0:18,0:18:49.30:0,49,470	0/0:41,0:41:99:0,117,1187	0/0:38,0:38:99:0,105,1065	0/0:24,0:24:66.13:0,66,667	1/1:3,32:35:96.31:1208,96,0	0/0:17,0:17:45.10:0,45,459	0/0:40,0:40:99:0,111,1127	0/0:41,0:41:99:0,120,1224	0/0:25,0:25:72.16:0,72,735	0/0:39,0:39:99:0,105,1071	0/0:25,0:25:66.12:0,66,660	0/0:24,0:24:63.14:0,63,643	0/0:26,0:26:72.14:0,72,727	0/0:16,0:16:45.10:0,45,459	1/1:1,12:13:31.67:412,32,0	0/0:22,0:22:54.10:0,54,541	0/0:37,0:37:96.21:0,96,979	0/0:12,0:12:33.08:0,33,337	0/0:22,0:22:60.12:0,60,605	0/0:22,0:22:66.13:0,66,666	0/0:21,0:21:54.12:0,54,551	0/0:34,0:34:90.14:0,90,899	0/0:21,0:21:63.14:0,63,643	0/0:30,0:30:78.17:0,78,796	0/0:17,0:17:45.10:0,45,459
chr10	74533649	.	A	AC	2385.30	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.689;DP=585;FS=1.748;HRun=0;HaplotypeScore=80.2833;InbreedingCoeff=0.9147;MQ=78.95;MQ0=0;MQRankSum=-2.321;QD=43.37;ReadPosRankSum=-3.801;VQSLOD=2.5345;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1370	0/0:9,0:9:27.07:0,27,345	0/0:13,0:13:39.08:0,39,507	0/0:13,0:13:3.05:0,3,282	0/0:31,0:31:90.29:0,90,1240	0/0:26,0:26:78.26:0,78,1090	0/0:15,0:15:42.13:0,42,571	1/1:0,38:38:99:1710,114,0	0/0:18,0:18:51.16:0,51,696	0/0:23,0:23:69.23:0,69,961	0/0:29,0:29:78.24:0,78,1059	0/0:29,0:29:87.28:0,87,1201	0/0:27,0:27:81.26:0,81,1117	0/0:21,0:21:63.19:0,63,849	0/0:22,0:22:62.39:0,62,799	0/0:20,0:20:60.20:0,60,839	0/0:17,0:17:48.07:0,48,612	1/1:0,17:17:51.17:797,51,0	0/0:18,0:18:54.13:0,54,706	0/0:21,0:21:60.17:0,60,791	0/0:19,0:19:54.17:0,54,738	0/0:20,0:20:60.18:0,60,806	0/0:17,0:17:51.15:0,51,675	0/0:13,0:13:39.12:0,39,529	0/0:18,0:18:54.18:0,54,754	0/0:28,0:28:81.27:0,81,1132	0/0:22,0:22:66.21:0,66,907	0/0:7,0:7:21.06:0,21,276
chr10	74534065	.	AGG	A	897.70	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=7.437;DP=620;FS=9.528;HRun=2;HaplotypeScore=87.4008;InbreedingCoeff=0.8369;MQ=72.31;MQ0=2;MQRankSum=1.844;QD=11.66;ReadPosRankSum=-1.318;VQSLOD=-0.5015;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:27.07:0,27,335	0/0:7,0:7:21.07:0,21,317	0/0:35,0:13:24.99:0,25,289	0/1:20,0:12:2.06:2,0,98	0/0:30,0:30:87.22:0,87,1220	0/0:24,0:24:72.07:0,72,1056	0/0:11,0:11:30.10:0,30,440	1/1:32,3:37:78.58:700,79,0	0/0:21,0:21:63.11:0,63,895	0/0:21,0:21:22.30:0,22,594	0/0:24,1:25:32.47:0,32,826	0/0:8,0:8:24.08:0,24,365	0/0:20,0:20:60.20:0,60,924	0/0:31,0:31:82.55:0,83,1205	0/0:27,0:27:81.16:0,81,1185	0/0:22,0:22:60.16:0,60,741	0/0:17,0:17:48.15:0,48,732	1/1:8,11:20:26.10:318,26,0	0/0:18,0:17:51.17:0,51,783	0/0:28,0:28:66.96:0,67,1168	0/0:22,0:22:62.80:0,63,955	0/0:19,0:19:56.59:0,57,740	0/0:23,0:23:69.19:0,69,1009	0/0:4,0:4:12.04:0,12,161	0/0:23,0:23:56.71:0,57,637	0/0:23,0:23:54.95:0,55,970	0/0:44,0:45:99:0,113,1790	0/0:28,0:28:78.26:0,78,1148
chr10	74534066	.	GGA	G	1520.06	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.631;DP=636;FS=0.000;HRun=0;HaplotypeScore=88.2139;InbreedingCoeff=0.9139;MQ=72.72;MQ0=2;MQRankSum=1.280;QD=26.67;ReadPosRankSum=-0.767;VQSLOD=4.4505;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:26.91:0,27,217	0/0:7,0:7:21.02:0,21,248	0/0:37,0:15:25.34:0,25,288	0/0:20,0:12:4.32:0,4,44	0/0:31,0:31:90.04:0,90,1288	0/0:24,0:24:72.15:0,72,1063	0/0:12,0:12:30.04:0,30,407	1/1:6,31:37:99:1198,100,0	0/0:21,0:21:63.16:0,63,967	0/0:22,0:22:50.15:0,50,718	0/0:29,0:29:43.20:0,43,977	0/0:9,0:9:27.04:0,27,389	0/0:22,0:22:65.18:0,65,988	0/0:31,0:31:89.57:0,90,1391	0/0:27,0:27:76.88:0,77,1279	0/0:24,0:24:63.03:0,63,783	0/0:17,0:17:47.34:0,47,790	1/1:14,5:20:38.95:443,39,0	0/0:18,0:17:51.12:0,51,840	0/0:29,0:29:83.49:0,83,1273	0/0:22,0:22:62.67:0,63,1016	0/0:19,0:19:52.29:0,52,790	0/0:24,0:24:72.15:0,72,1121	0/0:4,0:4:12.02:0,12,189	0/0:21,0:22:53.17:0,53,711	0/0:23,0:23:68.99:0,69,1073	0/0:45,0:45:99:0,130,1895	0/0:29,0:29:77.85:0,78,985
chr10	74535435	.	AAAAACAAAAC	A	953.85	PASS	AB=0.636;AC=3;AF=0.054;AN=56;BaseQRankSum=7.399;DP=607;FS=13.553;HRun=0;HaplotypeScore=170.0312;InbreedingCoeff=0.7472;MQ=63.80;MQ0=3;MQRankSum=-2.084;QD=28.90;ReadPosRankSum=-3.514;VQSLOD=1.4348;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:54.10:0,54,2368	0/0:6,0:6:18.06:0,18,839	0/0:23,0:14:10.57:0,11,389	0/0:36,0:21:22.92:0,23,378	0/0:36,0:36:93.32:0,93,3984	0/0:22,0:21:57.19:0,57,2340	0/0:24,0:24:51.17:0,51,2084	1/1:4,15:19:45.14:753,45,0	0/0:16,0:16:45.15:0,45,1937	0/0:29,0:29:72.23:0,72,2738	0/0:20,0:19:54.18:0,54,2313	0/0:29,0:29:72.25:0,72,3037	0/0:21,0:21:54.17:0,54,2321	0/0:13,0:13:39.13:0,39,1508	0/0:28,0:28:78.26:0,78,3427	0/0:25,0:25:63.21:0,63,2504	0/0:28,0:28:42.56:0,43,2299	0/1:6,8:14:2.29:307,0,2	0/0:26,0:26:51.10:0,51,1571	0/0:24,0:24:63.18:0,63,2372	0/0:8,0:8:21.07:0,21,923	0/0:15,0:15:30.10:0,30,1375	0/0:19,0:19:51.18:0,51,2148	0/0:23,0:23:60.63:0,61,2313	0/0:15,0:15:39.13:0,39,1840	0/0:27,0:27:75.25:0,75,2966	0/0:33,0:33:90.31:0,90,3768	0/0:4,0:4:9.03:0,9,455
chr10	74535667	.	C	CAGAG	3533.16	PASS	AB=0.924;AC=24;AF=0.444;AN=54;BaseQRankSum=-0.534;DP=585;FS=2.325;HRun=0;HaplotypeScore=122.6831;InbreedingCoeff=0.6756;MQ=65.85;MQ0=8;MQRankSum=1.621;QD=12.62;ReadPosRankSum=-0.596;VQSLOD=3.3569;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,1:21:11.97:229,12,0	0/0:3,0:3:6.01:0,6,76	./.	0/0:33,0:15:9.12:0,9,75	0/0:24,0:24:39.59:0,40,598	0/0:32,0:31:36.74:0,37,611	0/0:11,0:11:17.84:0,18,229	0/1:24,0:24:27.98:28,0,50	1/1:5,13:20:23.85:576,24,0	1/1:17,0:17:15.92:195,16,0	1/1:18,0:17:14.83:164,15,0	1/1:7,8:17:20.81:443,21,0	1/1:8,10:19:17.63:352,18,0	0/0:19,0:19:38.99:0,39,540	0/0:32,0:34:60.15:0,60,869	1/1:18,0:17:26.35:287,26,0	0/1:18,0:21:1.47:1,0,353	0/0:25,0:24:17.40:0,17,366	0/0:25,0:24:27.54:0,28,386	0/0:10,0:12:20.71:0,21,276	0/0:29,0:28:35.99:0,36,692	1/1:16,0:16:14.72:216,15,0	0/1:17,12:30:24.88:423,0,25	1/1:6,14:22:23.82:519,24,0	1/1:14,0:14:6.39:43,6,0	0/1:21,0:21:56.26:56,0,510	0/0:23,0:26:54.15:0,54,781	0/0:10,0:10:24.08:0,24,380
chr10	74537535	.	AGAGTGTGTGTGTGT	A	4780.78	PASS	AB=0.842;AC=21;AF=0.375;AN=56;BaseQRankSum=8.263;DP=681;FS=16.668;HRun=0;HaplotypeScore=217.8379;InbreedingCoeff=0.7169;MQ=56.74;MQ0=35;MQRankSum=-4.051;QD=17.77;ReadPosRankSum=3.801;VQSLOD=2.5717;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:99:160,0,211	0/0:9,0:9:21.04:0,21,721	0/0:21,0:11:13.25:0,13,167	0/0:27,0:13:15.95:0,16,155	0/0:34,0:33:74.14:0,74,1997	0/0:27,0:24:61.47:0,61,2061	0/0:35,0:33:87.06:0,87,2735	0/0:35,0:34:98.64:0,99,1185	1/1:5,15:19:14.09:564,14,0	1/1:3,14:17:41.82:765,42,0	1/1:1,13:13:8.94:269,9,0	1/1:2,19:21:28.34:1068,28,0	1/1:9,21:26:20.25:858,20,0	0/0:23,0:22:44.21:0,44,2461	0/0:27,0:27:19:0,19,2255	1/1:2,18:19:3.48:129,3,0	0/0:25,0:24:63.05:0,63,2320	0/0:20,0:20:54.04:0,54,1394	0/0:22,0:21:23.67:0,24,999	0/0:22,0:21:21.33:0,21,1385	0/0:46,0:45:80.63:0,81,3680	1/1:1,19:20:5.81:166,6,0	0/1:2,19:21:0.08:162,0,0	1/1:5,20:22:3.01:127,3,0	1/1:3,22:26:12.04:385,12,0	0/1:18,0:18:99:127,0,1396	0/0:30,0:30:62.78:0,63,2812	0/0:9,0:8:24:0,24,587
chr10	74537537	.	AGTGTGTGTGTGT	A	3182.39	PASS	AB=0.900;AC=23;AF=0.442;AN=52;BaseQRankSum=9.826;DP=670;FS=5.044;HRun=0;HaplotypeScore=201.1944;InbreedingCoeff=0.7900;MQ=55.73;MQ0=36;MQRankSum=-8.415;QD=12.15;ReadPosRankSum=3.829;VQSLOD=1.9738;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,13:30:6.01:203,6,0	0/0:7,0:8:12.04:0,12,520	./.	./.	0/0:35,0:35:38.92:0,39,1675	0/0:26,0:23:34.11:0,34,1564	0/0:36,0:34:51.18:0,51,2459	0/0:30,0:34:41.86:0,42,702	1/1:19,0:18:14.31:394,14,0	1/1:15,1:16:17.54:447,18,0	1/1:14,0:13:6.02:180,6,0	1/1:22,0:21:27.91:763,28,0	1/1:29,0:26:20.65:648,21,0	0/0:23,0:22:42.14:0,42,2062	0/0:26,0:27:39.59:0,40,1828	1/1:20,0:19:3.01:93,3,0	0/0:26,0:26:42.62:0,43,1887	0/0:18,0:19:36.07:0,36,1057	0/0:20,0:19:17.42:0,17,628	0/0:20,0:19:24.08:0,24,1087	0/0:47,0:45:70.11:0,70,2980	1/1:20,0:20:6:117,6,0	1/1:20,0:20:8.90:67,9,0	1/1:24,0:22:3.01:95,3,0	1/1:25,0:26:12:254,12,0	0/1:16,2:18:99:118,0,1099	0/0:30,0:30:42.14:0,42,2251	0/0:10,0:9:11.40:0,11,398
chr10	74538601	.	TA	T	1032.68	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.704;DP=680;FS=1.415;HRun=5;HaplotypeScore=72.5887;InbreedingCoeff=0.9906;MQ=74.82;MQ0=0;MQRankSum=-0.374;QD=24.02;ReadPosRankSum=-2.571;VQSLOD=1.9207;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1605	0/0:5,0:5:15.05:0,15,205	0/0:17,0:17:48.15:0,48,624	0/0:16,0:16:25.05:0,25,522	0/0:27,0:27:81.26:0,81,1093	0/0:22,0:21:57.19:0,57,778	0/0:17,0:17:45.13:0,45,598	1/1:3,26:29:75.16:814,75,0	0/0:30,0:30:78.24:0,78,1036	0/0:25,0:25:75.24:0,75,1011	0/0:19,0:19:51.15:0,51,670	0/0:29,0:29:78.24:0,78,1038	0/0:30,0:30:84.24:0,84,1102	0/0:28,0:28:84.28:0,84,1149	0/0:30,0:30:84.26:0,84,1120	0/0:24,0:24:66.21:0,66,887	0/0:18,0:18:51.17:0,51,697	1/1:3,11:14:30.08:340,30,0	0/0:20,0:20:51.15:0,51,669	0/0:29,0:29:78.25:0,78,1049	0/0:33,0:33:93.30:0,93,1254	0/0:17,0:17:48.15:0,48,641	0/0:26,0:26:75.25:0,75,1025	0/0:17,0:17:45.15:0,45,614	0/0:24,0:24:66.21:0,66,889	0/0:41,0:41:99:0,120,1578	0/0:40,0:40:99:0,117,1528	0/0:11,0:11:33.11:0,33,451
chr10	74542401	.	A	AG	4131.04	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=17.906;DP=609;FS=4.088;HRun=1;HaplotypeScore=74.1037;InbreedingCoeff=0.9826;MQ=84.42;MQ0=0;MQRankSum=-0.932;QD=17.36;ReadPosRankSum=2.552;VQSLOD=4.1692;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:71.10:482,71,0	0/0:7,0:7:21.07:0,21,273	0/0:17,0:17:48.16:0,48,623	0/0:21,0:22:52.93:0,53,638	0/0:30,0:30:87.27:0,87,1110	0/0:27,0:27:78.25:0,78,1013	0/0:26,0:26:78.24:0,78,998	0/0:39,0:39:99:0,114,1480	1/1:15,0:15:41.36:274,41,0	1/1:26,1:27:72.29:437,72,0	1/1:15,1:16:47.18:322,47,0	1/1:24,0:24:64.95:418,65,0	1/1:19,1:20:32.30:323,32,0	0/0:28,0:28:84.27:0,84,1090	0/0:27,0:27:78.25:0,78,1012	1/1:31,0:31:82.41:513,82,0	0/0:11,0:11:33.08:0,33,411	0/0:15,1:16:8.93:0,9,509	0/0:13,0:13:36.12:0,36,467	0/0:26,0:26:75.24:0,75,974	0/0:24,0:24:72.22:0,72,920	1/1:22,0:22:40.27:388,40,0	1/1:17,0:17:47.35:316,47,0	1/1:20,0:19:51.47:326,51,0	1/1:18,0:18:50.23:331,50,0	0/0:20,0:20:57.19:0,57,740	0/0:35,0:35:99:0,102,1292	0/0:3,0:3:9.03:0,9,117
chr10	74542402	.	G	GT	9793.34	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-14.966;DP=613;FS=4.614;HRun=1;HaplotypeScore=54.6044;InbreedingCoeff=0.9908;MQ=83.71;MQ0=0;MQRankSum=-1.565;QD=40.81;ReadPosRankSum=2.319;VQSLOD=5.4411;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:72.24:1079,72,0	0/0:7,0:7:21.07:0,21,273	0/0:17,0:17:48.14:0,48,609	0/0:21,0:21:51.12:0,51,626	0/0:30,0:30:87.25:0,87,1101	0/0:27,0:27:81.25:0,81,1036	0/0:26,0:26:78.25:0,78,1012	0/0:39,0:39:99:0,114,1468	1/1:0,14:14:42.14:629,42,0	1/1:1,25:27:78.25:1142,78,0	1/1:1,15:16:48.16:713,48,0	1/1:1,24:25:66.22:989,66,0	1/1:2,18:20:54.13:777,54,0	0/0:30,0:30:84.26:0,84,1076	0/0:27,0:27:81.23:0,81,1021	1/1:0,31:31:84.28:1259,84,0	0/0:11,0:11:30.10:0,30,389	0/0:16,0:16:25.78:0,26,526	0/0:13,0:13:36.10:0,36,442	0/0:27,0:27:78.24:0,78,997	0/0:24,0:24:69.20:0,69,880	1/1:2,22:24:63.21:944,63,0	1/1:0,17:17:48.14:719,48,0	1/1:0,19:19:54.01:778,54,0	1/1:0,18:18:51.17:764,51,0	0/0:20,0:20:60.19:0,60,767	0/0:35,0:35:99:0,102,1308	0/0:3,0:3:9.03:0,9,117
chr10	74544330	.	C	CAAAA	1487.35	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-4.811;DP=489;FS=2.507;HRun=7;HaplotypeScore=70.8287;InbreedingCoeff=0.7241;MQ=55.02;MQ0=12;MQRankSum=-5.782;QD=24.38;ReadPosRankSum=-4.762;VQSLOD=-0.5786;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,1620	0/0:5,0:5:15.05:0,15,235	0/0:10,0:3:9.03:0,9,140	0/0:18,0:2:6:0,6,70	0/0:30,0:29:78.09:0,78,1055	0/0:19,0:19:51.08:0,51,705	0/1:14,0:14:6.13:6,0,477	1/1:12,21:35:71.96:1228,72,0	0/0:10,0:10:21.05:0,21,328	0/0:17,0:17:42.11:0,42,598	0/0:16,0:14:39.11:0,39,586	0/0:21,0:21:54.10:0,54,735	0/0:11,0:11:17.99:0,18,237	0/0:16,0:15:30.03:0,30,401	0/0:16,0:16:33.03:0,33,427	0/0:6,0:6:12.01:0,12,144	0/0:30,0:29:81.16:0,81,1151	1/1:2,9:10:15.05:376,15,0	0/0:20,0:20:48.07:0,48,611	0/0:22,0:22:57.15:0,57,869	0/0:12,0:12:27.05:0,27,375	0/0:14,0:14:30.05:0,30,403	0/0:16,0:13:36.10:0,36,519	0/0:8,0:8:14.57:0,15,166	0/0:26,0:26:65.98:0,66,813	0/0:14,0:14:36.05:0,36,455	0/0:20,0:20:53.84:0,54,690	0/0:10,0:10:18.05:0,18,281
chr10	74544577	.	TTTTG	T	1367	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.855;DP=604;FS=30.687;HRun=0;HaplotypeScore=97.2432;InbreedingCoeff=0.9079;MQ=74.04;MQ0=0;MQRankSum=-2.533;QD=31.79;ReadPosRankSum=-3.902;VQSLOD=1.1302;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.23:0,84,1953	0/0:4,0:4:3.01:0,3,75	0/0:18,0:14:30.08:0,30,608	0/0:35,0:32:50.96:0,51,1186	0/0:32,0:32:84.28:0,84,1995	0/0:20,0:20:54.18:0,54,1294	0/0:19,0:20:45.13:0,45,1003	1/1:9,25:34:72.19:1127,72,0	0/0:22,0:22:57.20:0,57,1350	0/0:22,0:22:57.20:0,57,1349	0/0:21,0:21:54.18:0,54,1254	0/0:22,0:22:54.17:0,54,1304	0/0:24,0:24:63.22:0,63,1512	0/0:27,0:27:75.26:0,75,1837	0/0:25,0:25:69.24:0,69,1685	0/0:23,0:23:63.22:0,63,1511	0/0:20,0:20:51.17:0,51,1198	1/1:0,9:9:21.07:361,21,0	0/0:10,0:10:21.07:0,21,484	0/0:29,0:29:72.25:0,72,1709	0/0:35,0:35:99:0,102,2452	0/0:12,0:12:33.11:0,33,771	0/0:15,0:15:36.11:0,36,790	0/0:25,0:25:66.23:0,66,1628	0/0:8,0:8:18.06:0,18,394	0/0:25,0:25:57.19:0,57,1414	0/0:30,0:30:84.29:0,84,2068	0/0:9,0:9:24.08:0,24,522
chr10	74546748	.	CA	C	637.95	PASS	AB=0.763;AC=14;AF=0.250;AN=56;BaseQRankSum=1.566;DP=548;FS=1.163;HRun=15;HaplotypeScore=74.8838;InbreedingCoeff=0.3782;MQ=55.39;MQ0=34;MQRankSum=-0.201;QD=4.46;ReadPosRankSum=0.905;VQSLOD=1.6397;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:48.92:0,49,389	0/0:4,0:3:8.94:0,9,71	0/0:57,0:9:4.85:0,5,75	0/0:41,0:10:5.23:0,5,25	0/0:19,1:20:10.92:0,11,245	0/0:18,0:18:34.98:0,35,253	0/0:14,0:12:20.99:0,21,181	0/0:43,0:41:23.57:0,24,138	0/1:9,1:9:11.70:61,0,12	0/1:10,12:20:22.68:180,0,23	1/1:2,7:9:17.73:115,18,0	0/1:17,3:20:12.72:13,0,102	0/1:14,6:16:16.26:40,0,16	0/0:11,1:10:14.98:0,15,125	0/0:19,0:21:37.37:0,37,286	1/1:5,12:17:21.72:127,22,0	0/0:28,0:28:54.88:0,55,437	0/0:10,0:9:0.94:0,1,3	0/0:29,0:31:50.34:0,50,370	0/0:10,0:9:18:0,18,158	0/0:5,0:6:8.82:0,9,61	1/1:4,1:4:5.90:38,6,0	1/1:6,1:4:4.51:23,5,0	0/1:11,5:14:5.97:90,0,6	0/1:5,8:12:0.64:115,0,1	0/0:22,0:21:21.81:0,22,186	0/0:22,2:24:5.62:0,6,257	0/0:6,0:5:11.76:0,12,83
chr10	74547096	.	C	CGTGT	3838.72	PASS	AB=0.800;AC=27;AF=0.482;AN=56;BaseQRankSum=-0.610;DP=209;FS=19.095;HRun=0;HaplotypeScore=43.6579;InbreedingCoeff=0.6970;MQ=76.44;MQ0=3;MQRankSum=-5.721;QD=31.99;ReadPosRankSum=2.574;VQSLOD=1.8042;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,7:10:6.02:153,6,0	0/0:1,0:1:3.01:0,3,52	0/0:21,0:19:38.28:0,38,534	0/0:17,0:11:14.25:0,14,314	0/0:7,0:7:18.03:0,18,260	0/0:3,0:3:9.03:0,9,153	0/0:1,0:1:3:0,3,25	1/1:14,0:44:78.57:1102,79,0	1/1:0,4:4:3.01:77,3,0	1/1:1,10:11:30.10:710,30,0	1/1:0,6:6:12.04:306,12,0	1/1:0,2:4:6.91:153,7,0	1/1:1,7:8:15.05:371,15,0	0/0:3,0:3:9.03:0,9,151	0/0:6,0:6:12.04:0,12,210	1/1:0,4:4:12.04:306,12,0	0/0:7,0:7:6:0,6,77	1/1:0,0:4:6.02:106,6,0	0/1:3,0:4:3.93:4,0,70	0/0:5,0:5:15.05:0,15,263	0/0:4,0:4:12.04:0,12,204	1/1:0,5:6:5.81:89,6,0	1/1:1,4:6:9.03:230,9,0	1/1:4,0:4:1.55:4,2,0	1/1:1,4:5:9.03:229,9,0	0/0:7,0:7:18.05:0,18,287	0/0:5,0:5:11.94:0,12,146	0/0:1,0:1:3.01:0,3,53
chr10	74547654	.	T	TA	923.92	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.556;DP=686;FS=3.411;HRun=11;HaplotypeScore=97.0253;InbreedingCoeff=0.9142;MQ=75.81;MQ0=3;MQRankSum=-1.567;QD=17.43;ReadPosRankSum=-2.492;VQSLOD=3.3076;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,1:54:93.94:0,94,976	0/0:12,0:14:36.93:0,37,267	0/0:35,0:26:10.68:0,11,171	0/0:25,0:17:14.39:0,14,98	0/0:35,0:36:85.65:0,86,653	0/0:22,0:23:67.74:0,68,510	0/0:17,2:19:11.34:0,11,265	1/1:10,22:31:66.04:638,66,0	0/0:20,0:20:56.75:0,57,437	0/0:32,0:32:74.68:0,75,580	0/0:16,0:19:36.86:0,37,265	0/0:27,0:27:62.69:0,63,481	0/0:21,0:21:56.75:0,57,437	0/0:24,0:24:53.77:0,54,417	0/0:20,1:22:10.41:0,10,254	0/0:20,1:23:27.41:0,27,376	0/0:31,0:31:60.07:0,60,534	1/1:6,15:21:34.61:407,35,0	0/0:20,0:20:38.79:0,39,299	0/0:24,1:26:31.31:0,31,411	0/0:20,0:20:47.76:0,48,365	0/0:19,0:19:33.57:0,34,340	0/0:9,0:9:20.92:0,21,163	0/0:22,0:22:53.70:0,54,411	0/0:23,1:24:22.39:0,22,347	0/0:30,0:30:68.70:0,69,533	0/0:28,2:30:53.24:0,53,596	0/0:6,0:6:11.95:0,12,93
chr10	74548106	.	TTAAAAA	T	1059.88	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=6.801;DP=338;FS=0.863;HRun=0;HaplotypeScore=67.9546;InbreedingCoeff=0.6437;MQ=66.51;MQ0=1;MQRankSum=-2.414;QD=22.55;ReadPosRankSum=-2.636;VQSLOD=2.6812;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:30.08:0,30,835	0/0:6,0:6:15.05:0,15,493	0/0:10,0:6:8.92:0,9,153	0/0:9,0:9:1.91:0,2,190	0/0:23,0:23:63.18:0,63,1791	0/0:15,0:15:39.13:0,39,1218	0/0:6,0:6:9.03:0,9,235	1/1:20,15:35:45.15:860,45,0	0/0:6,0:6:18.06:0,18,529	0/0:23,0:23:60.21:0,60,1976	0/0:11,0:11:18.03:0,18,434	0/0:5,0:5:6.02:0,6,89	0/0:11,0:11:21.05:0,21,616	0/0:10,0:10:18.06:0,18,568	0/0:4,0:4:3.01:0,3,99	0/0:9,0:9:24.08:0,24,731	0/0:22,0:22:54.18:0,54,1645	1/1:4,8:12:15.05:317,15,0	0/0:22,0:22:51.16:0,51,1487	0/0:16,0:16:30.10:0,30,927	0/0:6,0:6:15.05:0,15,494	./.	0/0:1,0:1:3.01:0,3,38	0/0:2,0:2:6.02:0,6,197	0/0:11,0:11:27.08:0,27,816	0/0:16,0:16:45.15:0,45,1283	0/0:21,0:21:60.21:0,60,1975	0/0:11,0:11:27.09:0,27,835
chr10	74548372	.	AT	A	1408.36	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.954;DP=512;FS=5.566;HRun=3;HaplotypeScore=49.0096;InbreedingCoeff=0.9879;MQ=71.65;MQ0=0;MQRankSum=0.743;QD=26.08;ReadPosRankSum=-2.521;VQSLOD=1.9229;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.13:0,51,635	0/0:7,0:7:21.04:0,21,250	0/0:11,0:9:21.02:0,21,228	0/0:11,0:11:20.25:0,20,222	0/0:23,0:23:69.19:0,69,877	0/0:23,0:23:69.20:0,69,891	0/0:14,0:14:39.07:0,39,459	1/1:2,32:34:96.12:1086,96,0	0/0:13,0:13:39.13:0,39,520	0/0:26,0:26:75.19:0,75,958	0/0:24,0:24:69.18:0,69,864	0/0:16,0:16:48.14:0,48,626	0/0:20,0:20:60.17:0,60,759	0/0:23,0:23:63.63:0,64,774	0/0:19,0:19:47.48:0,47,630	0/0:21,0:21:63.17:0,63,807	0/0:21,0:21:45.82:0,46,595	1/1:1,19:20:35.87:444,36,0	0/0:20,0:20:54.15:0,54,682	0/0:20,0:20:60.17:0,60,770	0/0:6,0:6:18.04:0,18,223	0/0:8,0:8:24.04:0,24,302	0/0:14,0:14:36.08:0,36,435	0/0:15,0:15:45.15:0,45,600	0/0:18,0:18:54.14:0,54,676	0/0:24,0:24:72.21:0,72,925	0/0:27,0:27:78.22:0,78,998	0/0:15,0:15:45.12:0,45,559
chr10	74549837	.	TA	T	1148.83	PASS	AB=0.875;AC=7;AF=0.125;AN=56;BaseQRankSum=8.586;DP=594;FS=0.985;HRun=12;HaplotypeScore=59.3175;InbreedingCoeff=0.7349;MQ=62.87;MQ0=1;MQRankSum=0.263;QD=11.84;ReadPosRankSum=-0.911;VQSLOD=3.0314;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:23:54.86:406,55,0	0/0:14,0:14:36.07:0,36,365	0/0:10,1:5:7.54:0,8,45	0/0:6,0:4:8.87:0,9,67	0/0:24,3:29:45.70:0,46,611	0/0:36,0:36:90.16:0,90,902	0/0:10,0:11:26.19:0,26,290	1/1:5,21:26:59.70:459,60,0	0/0:19,1:20:27.86:0,28,464	0/0:28,2:30:42.88:0,43,606	0/0:25,0:25:54.03:0,54,534	0/0:16,0:16:30.04:0,30,297	0/0:23,0:23:60.11:0,60,603	0/0:19,0:21:53.92:0,54,519	0/0:21,0:21:45.06:0,45,444	0/1:24,4:28:37.07:37,0,558	0/0:20,0:20:51.02:0,51,494	1/1:3,17:20:50.80:394,51,0	0/0:14,1:15:0.80:0,1,184	0/0:41,0:43:81.72:0,82,975	0/0:8,0:8:24.04:0,24,238	0/0:11,1:12:13.59:0,14,205	0/0:19,0:19:48.10:0,48,487	0/0:19,1:20:27.83:0,28,454	0/0:33,0:35:76.65:0,77,925	0/0:18,0:18:42.08:0,42,426	0/0:34,0:34:77.09:0,77,790	0/0:9,0:9:24.05:0,24,244
chr10	74550282	.	C	CTATGATAAAATAGCTAATTAACGTATCATT	10945.61	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.529;DP=598;FS=4.263;HRun=0;HaplotypeScore=425.2113;InbreedingCoeff=0.9956;MQ=74.64;MQ0=0;MQRankSum=-10.522;QD=195.46;ReadPosRankSum=-3.367;VQSLOD=3.3667;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.18:0,60,4165	0/0:10,0:10:30.08:0,30,1748	0/0:16,0:16:35.80:0,36,2303	0/0:8,0:8:20.66:0,21,857	0/0:34,0:34:96.32:0,96,6583	0/0:28,0:28:84.26:0,84,5314	0/0:15,0:15:42.14:0,42,3062	1/1:38,0:38:99:6327,102,0	0/0:13,0:13:39.13:0,39,2918	0/0:37,0:37:99:0,108,7610	0/0:29,0:29:84.27:0,84,5798	0/0:17,0:17:45.14:0,45,2677	0/0:16,0:16:45.14:0,45,3109	0/0:22,0:22:63.22:0,63,4857	0/0:9,0:9:27.09:0,27,2071	0/0:20,0:20:60.19:0,60,4352	0/0:19,0:19:54.66:0,55,4059	1/1:13,3:18:45.15:4619,45,0	0/0:15,0:15:42.14:0,42,2871	0/0:40,0:40:99:0,117,7839	0/0:16,0:16:48.15:0,48,3275	0/0:18,0:18:54.19:0,54,3792	0/0:42,0:42:99:0,126,7907	0/0:9,0:9:24.07:0,24,1341	0/0:21,0:21:63.22:0,63,4281	0/0:28,0:28:75.26:0,75,4975	0/0:29,0:28:81.26:0,81,5228	0/0:11,0:11:33.11:0,33,2126
chr10	74551114	.	C	CAT	15260.92	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-18.226;DP=660;FS=0.295;HRun=0;HaplotypeScore=71.6783;InbreedingCoeff=0.9975;MQ=84.90;MQ0=1;MQRankSum=-0.936;QD=52.62;ReadPosRankSum=1.911;VQSLOD=5.7443;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:30:69.19:1349,69,0	0/0:5,0:5:15.05:0,15,244	0/0:24,0:24:60.66:0,61,901	0/0:20,0:20:56.19:0,56,749	0/0:29,0:28:87.20:0,87,1329	0/0:26,0:26:75.26:0,75,1218	0/0:14,0:14:42.08:0,42,628	1/1:0,30:30:90.17:1469,90,0	1/1:0,25:25:63.22:1278,63,0	1/1:2,27:29:84.28:1673,84,0	1/1:0,21:21:51.18:1035,51,0	1/1:0,22:22:63.22:1277,63,0	1/1:0,30:30:78.27:1580,78,0	0/0:32,0:32:96.26:0,96,1504	0/0:22,0:22:60.20:0,60,964	1/1:0,33:33:90.31:1827,90,0	0/0:17,0:17:51.13:0,51,800	1/1:0,12:12:33.11:669,33,0	0/0:22,0:22:63.21:0,63,1001	0/0:33,0:33:99:0,99,1470	0/0:31,0:31:90.20:0,90,1403	1/1:0,15:15:45.15:913,45,0	1/1:0,18:18:51.18:1035,51,0	1/1:0,11:11:24.08:487,24,0	1/1:0,12:13:33.11:669,33,0	0/0:36,1:37:44.37:0,44,1558	0/0:41,0:41:99:0,117,1802	0/0:17,0:17:48.14:0,48,753
chr10	74551825	.	C	CT	13850.80	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-17.431;DP=717;FS=14.216;HRun=1;HaplotypeScore=64.0939;InbreedingCoeff=0.9991;MQ=90.54;MQ0=0;MQRankSum=-1.871;QD=41.47;ReadPosRankSum=2.137;VQSLOD=4.0009;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:84.27:1258,84,0	0/0:10,0:10:30.10:0,30,389	0/0:27,0:27:78.23:0,78,991	0/0:29,0:29:84.16:0,84,1015	0/0:31,0:30:93.25:0,93,1148	0/0:27,0:27:75.17:0,75,901	0/0:24,0:24:66.17:0,66,823	1/1:5,43:48:99:1829,129,0	1/1:0,34:34:96.33:1438,96,0	1/1:0,35:35:99:1554,105,0	1/1:0,22:22:66.22:989,66,0	1/1:0,24:24:69.23:1034,69,0	1/1:1,20:21:60.17:874,60,0	0/0:19,0:19:54.18:0,54,700	0/0:38,0:38:99:0,114,1456	1/1:1,26:27:72.24:1079,72,0	0/0:28,0:28:84.21:0,84,1043	1/1:2,7:9:24.04:334,24,0	0/0:24,0:24:69.22:0,69,883	0/0:27,0:27:75.24:0,75,966	0/0:24,0:24:72.23:0,72,934	1/1:0,17:17:51.17:764,51,0	1/1:0,19:19:53.97:809,54,0	1/1:1,28:29:72.24:1079,72,0	1/1:0,19:19:54.18:809,54,0	0/0:32,0:32:87.24:0,87,1099	0/0:36,0:36:99:0,105,1361	0/0:7,0:7:21.07:0,21,273
chr10	74551893	.	CA	C	1278.83	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.917;DP=721;FS=2.965;HRun=3;HaplotypeScore=85.1836;InbreedingCoeff=0.9473;MQ=81.10;MQ0=0;MQRankSum=-4.838;QD=32.79;ReadPosRankSum=-1.621;VQSLOD=3.3360;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.24:0,72,1037	0/0:15,0:15:45.15:0,45,647	0/0:21,0:21:57.19:0,57,802	0/0:16,0:16:48.08:0,48,615	0/0:35,0:35:99:0,105,1460	0/0:24,0:24:72.24:0,72,1036	0/0:20,0:20:60.20:0,60,862	1/1:0,31:31:90.27:1102,90,0	0/0:44,0:44:99:0,132,1895	0/0:35,0:35:96.32:0,96,1365	0/0:24,0:24:72.24:0,72,1037	0/0:24,0:24:72.24:0,72,1036	0/0:33,0:33:96.32:0,96,1382	0/0:38,0:38:99:0,114,1602	0/0:44,0:44:99:0,132,1830	0/0:22,0:22:63.18:0,63,885	0/0:23,0:23:69.23:0,69,993	1/1:0,8:8:24.08:297,24,0	0/0:27,0:27:75.25:0,75,1079	0/0:23,0:23:69.23:0,69,991	0/0:30,0:30:87.29:0,87,1253	0/0:19,0:19:51.16:0,51,716	0/0:13,0:13:33.11:0,33,471	0/0:29,0:29:75.25:0,75,1071	0/0:36,0:36:99:0,108,1538	0/0:29,0:29:84.28:0,84,1210	0/0:30,0:30:87.29:0,87,1253	0/0:2,0:2:6.02:0,6,86
chr10	74552119	.	A	AT	7278.64	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-11.001;DP=611;FS=4.405;HRun=6;HaplotypeScore=57.5758;InbreedingCoeff=0.9731;MQ=68.51;MQ0=0;MQRankSum=0.314;QD=29.23;ReadPosRankSum=4.384;VQSLOD=5.4778;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:60.19:753,60,0	0/0:10,0:10:30.04:0,30,293	0/0:9,0:8:8.83:0,9,65	0/0:13,0:9:5.27:0,5,23	0/0:29,0:29:78.14:0,78,781	0/0:22,0:22:63.13:0,63,636	0/0:18,0:18:45.08:0,45,452	0/0:35,0:35:87.15:0,87,865	1/1:4,20:24:51.16:641,51,0	1/1:4,24:29:75.23:928,75,0	1/1:3,19:22:51.16:641,51,0	1/1:0,24:24:51.16:641,51,0	1/1:3,18:21:39.12:490,39,0	0/0:27,0:27:75.15:0,75,753	0/0:26,0:26:72.09:0,72,705	1/1:0,20:20:51.16:641,51,0	0/0:16,0:16:45.03:0,45,431	0/0:13,0:13:30.06:0,30,306	0/0:16,0:16:45.05:0,45,429	0/0:30,0:30:81.17:0,81,820	0/0:25,0:25:66.07:0,66,639	1/1:2,18:20:48.03:565,48,0	1/1:1,17:18:48.07:583,48,0	1/1:1,20:21:54.17:679,54,0	1/1:3,23:26:57.18:717,57,0	0/0:31,0:31:53.55:0,54,745	0/0:36,0:36:99:0,99,999	0/0:6,0:6:18.04:0,18,184
chr10	74552287	.	A	AACACACAC	10299.28	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-2.372;DP=596;FS=1.439;HRun=0;HaplotypeScore=168.8184;InbreedingCoeff=0.8674;MQ=63.43;MQ0=6;MQRankSum=-9.407;QD=36.27;ReadPosRankSum=-3.191;VQSLOD=4.1708;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:27:15.05:423,15,0	0/0:7,0:9:24.08:0,24,529	0/0:31,0:19:32.85:0,33,607	0/0:28,0:19:5.42:0,5,383	0/0:20,0:21:48.14:0,48,1089	0/0:25,0:28:51.10:0,51,1149	0/0:22,0:24:45.04:0,45,1018	1/1:26,0:24:24.08:468,24,0	1/1:14,5:25:20.68:683,21,0	1/1:13,9:24:48.16:1573,48,0	1/1:11,13:27:48.14:1733,48,0	1/1:15,7:27:26.45:919,26,0	1/1:8,5:16:18.06:723,18,0	0/0:22,0:22:51.17:0,51,1260	0/0:23,0:25:60.18:0,60,1253	1/1:7,10:18:24.55:973,25,0	0/1:16,0:17:38.81:39,0,695	1/1:11,0:11:7.27:207,7,0	0/0:18,0:20:45.08:0,45,923	0/0:16,0:16:24.07:0,24,519	0/0:26,0:28:63.14:0,63,1366	1/1:2,6:12:12.04:438,12,0	1/1:7,2:13:18.06:614,18,0	1/1:6,7:16:18.06:707,18,0	1/1:12,8:23:21.48:799,21,0	0/0:30,0:29:9.29:0,9,1283	0/0:27,0:27:75.26:0,75,1914	0/0:3,0:3:6.02:0,6,154
chr10	74553007	.	CA	C	786.12	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.190;DP=602;FS=0.834;HRun=1;HaplotypeScore=56.9032;InbreedingCoeff=0.9691;MQ=85.36;MQ0=0;MQRankSum=-3.805;QD=37.43;ReadPosRankSum=-0.458;VQSLOD=3.6528;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:63.21:881,63,0	0/0:9,0:9:27.07:0,27,408	0/0:21,0:21:63.21:0,63,1008	0/0:22,0:22:63.21:0,63,974	0/0:27,0:27:81.26:0,81,1265	0/0:29,0:29:87.30:0,87,1387	0/0:16,0:16:48.15:0,48,743	0/0:27,0:27:81.28:0,81,1295	0/0:25,0:25:74.47:0,74,1157	0/0:26,0:26:78.26:0,78,1228	0/0:20,0:20:60.20:0,60,959	0/0:26,0:26:78.27:0,78,1247	0/0:33,0:33:99:0,99,1553	0/0:19,0:19:57.19:0,57,911	0/0:24,0:24:72.25:0,72,1151	0/0:22,0:22:66.21:0,66,1032	0/0:16,0:16:45.15:0,45,715	0/0:14,0:14:38.92:0,39,588	0/0:18,0:18:51.16:0,51,792	0/0:26,0:26:78.27:0,78,1245	0/0:26,0:26:78.24:0,78,1198	0/0:15,0:15:45.15:0,45,719	0/0:22,0:22:66.21:0,66,1032	0/0:21,0:21:63.19:0,63,982	0/0:15,0:15:45.15:0,45,720	0/0:21,0:21:63.21:0,63,1008	0/0:37,0:37:99:0,111,1745	0/0:4,0:4:12.02:0,12,167
chr10	74553336	.	T	TATTAA	3379.56	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.856;DP=435;FS=5.738;HRun=0;HaplotypeScore=76.6627;InbreedingCoeff=0.8812;MQ=66.38;MQ0=1;MQRankSum=-4.726;QD=60.35;ReadPosRankSum=-4.764;VQSLOD=2.5864;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:36.12:0,36,689	0/0:5,0:5:15.05:0,15,308	0/0:5,0:5:11.93:0,12,159	0/0:8,0:8:11.28:0,11,191	0/0:22,0:22:60.14:0,60,1137	0/0:25,0:25:69.22:0,69,1372	0/0:4,0:4:6.02:0,6,123	1/1:10,24:41:93.29:2441,93,0	0/0:15,0:15:39.13:0,39,800	0/0:18,0:18:45.15:0,45,901	0/0:19,0:19:48.15:0,48,947	0/0:12,0:12:30.10:0,30,615	0/0:15,0:15:39.13:0,39,800	0/0:13,0:13:39.12:0,39,758	0/0:18,0:18:51.18:0,51,1041	0/0:16,0:16:45.15:0,45,890	0/0:24,0:24:63.19:0,63,1238	1/1:3,11:15:36.05:939,36,0	0/0:7,0:7:21.07:0,21,416	0/0:20,0:20:57.20:0,57,1168	0/0:8,0:8:15.05:0,15,308	0/0:6,0:6:11.97:0,12,203	0/0:26,0:26:72.25:0,72,1462	0/0:5,0:5:15.05:0,15,292	0/0:17,0:17:48.16:0,48,979	0/0:21,0:21:60.21:0,60,1178	0/0:25,0:25:75.22:0,75,1449	0/0:12,0:12:30:0,30,513
chr10	74553724	.	TCTCTCTCACACA	T	434.55	PASS	AB=0.924;AC=8;AF=0.160;AN=50;BaseQRankSum=1.998;DP=383;FS=27.042;HRun=0;HaplotypeScore=91.7469;InbreedingCoeff=0.3153;MQ=43.36;MQ0=80;MQRankSum=-1.661;QD=5.64;ReadPosRankSum=-1.537;VQSLOD=0.0267;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:22:19.10:0,19,255	0/0:6,0:4:9.03:0,9,204	./.	./.	0/0:20,0:17:36.12:0,36,892	0/0:9,0:7:9.03:0,9,273	0/0:20,0:13:15.72:0,16,280	0/1:15,0:13:28.33:284,0,28	0/0:15,0:10:0:0,0,0	0/0:15,0:12:29.13:0,29,638	0/0:17,0:16:29.89:0,30,813	1/1:18,0:15:1.67:61,2,0	0/1:9,7:14:40.11:91,0,40	0/0:13,0:10:9:0,9,121	0/0:18,0:14:24.08:0,24,583	0/0:11,0:9:15.05:0,15,451	0/0:28,0:22:30.98:0,31,906	0/1:5,0:2:16.14:53,0,16	0/0:9,0:4:9.50:0,9,163	0/0:18,0:14:33.57:0,34,768	0/0:17,0:11:18.04:0,18,400	./.	0/1:9,0:7:0:0,0,0	1/1:14,0:10:3.01:62,3,0	0/0:18,0:16:29.74:0,30,771	0/0:13,0:13:36.11:0,36,888	0/0:15,0:10:18.02:0,18,355	0/0:8,0:4:9.61:0,10,132
chr10	74553730	.	TCACACA	T	484.51	PASS	AB=0.672;AC=11;AF=0.204;AN=54;BaseQRankSum=1.795;DP=391;FS=16.435;HRun=0;HaplotypeScore=73.2639;InbreedingCoeff=0.5030;MQ=46.82;MQ0=69;MQRankSum=-1.612;QD=5.10;ReadPosRankSum=-1.462;VQSLOD=-0.0769;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:23:26.46:0,26,250	0/0:7,0:6:15.05:0,15,350	0/0:1,0:1:2.37:0,2,8	0/0:3,0:3:2.65:0,3,44	0/0:16,0:15:36.11:0,36,842	0/0:10,0:9:15.02:0,15,299	0/0:17,0:11:12.51:0,13,257	0/1:10,7:16:94.36:379,0,94	0/1:7,9:11:0:0,0,0	0/0:15,0:13:30.10:0,30,713	0/0:19,0:18:33.02:0,33,825	1/1:9,0:14:2.29:62,2,0	1/1:16,0:14:2.72:45,3,0	0/0:13,0:10:12.01:0,12,196	0/0:18,0:14:20.81:0,21,503	0/0:13,0:10:15.05:0,15,399	0/0:30,0:24:47.95:0,48,948	1/1:6,0:3:3.01:59,3,0	0/0:11,0:6:12.04:0,12,226	0/0:18,0:14:33.10:0,33,704	0/0:14,0:10:15.05:0,15,357	./.	0/1:4,4:6:0:0,0,0	1/1:4,0:13:3.01:62,3,0	0/0:16,0:16:32.90:0,33,828	0/0:15,0:15:32.38:0,32,777	0/0:17,0:12:27.05:0,27,555	0/0:6,0:2:3.01:0,3,72
chr10	74554133	.	AC	A	9565.08	PASS	AC=48;AF=0.960;AN=50;BaseQRankSum=1.484;DP=252;FS=0.000;HRun=1;HaplotypeScore=191.9637;InbreedingCoeff=0.5055;MQ=40.47;MQ0=0;MQRankSum=-2.439;QD=38.88;ReadPosRankSum=2.397;VQSLOD=4.3366;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:15.05:208,15,0	1/1:0,9:9:24.08:334,24,0	./.	0/0:2,0:2:3.48:0,3,40	1/1:2,29:31:81.27:1122,81,0	1/1:1,10:11:30.10:416,30,0	1/1:0,1:1:3.01:42,3,0	1/1:0,13:13:39.13:540,39,0	1/1:0,2:2:6.02:83,6,0	1/1:0,15:14:42.14:585,42,0	1/1:0,15:15:45.15:617,45,0	1/1:0,6:6:18.06:249,18,0	1/1:0,7:7:21.07:291,21,0	1/1:0,3:3:6.02:83,6,0	1/1:0,12:12:33.11:458,33,0	1/1:0,10:10:27.09:375,27,0	1/1:0,5:5:15.05:208,15,0	1/1:0,6:6:18.06:246,18,0	1/1:0,10:10:30.06:396,30,0	1/1:0,11:11:33.11:458,33,0	./.	1/1:1,3:4:12.03:154,12,0	1/1:0,15:15:45.15:612,45,0	./.	1/1:0,13:13:39.13:542,39,0	1/1:0,11:11:33.11:459,33,0	1/1:1,21:22:60.20:832,60,0	1/1:2,5:7:21.03:255,21,0
chr10	74554147	.	AT	A	9077.92	PASS	AC=48;AF=0.960;AN=50;BaseQRankSum=2.389;DP=260;FS=0.000;HRun=1;HaplotypeScore=273.5512;InbreedingCoeff=0.5056;MQ=36.18;MQ0=0;MQRankSum=-2.439;QD=35.19;ReadPosRankSum=1.662;VQSLOD=3.9422;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:24.02:292,24,0	1/1:0,9:9:27.09:350,27,0	./.	0/0:2,0:2:3.44:0,3,21	1/1:0,32:32:84.04:992,84,0	1/1:0,10:10:26.98:311,27,0	1/1:0,2:1:3.01:39,3,0	1/1:0,10:10:30.10:386,30,0	1/1:0,4:4:9.03:117,9,0	1/1:1,14:15:45.13:569,45,0	1/1:0,18:18:48.11:602,48,0	1/1:0,8:8:24.08:311,24,0	1/1:0,7:7:21.07:272,21,0	1/1:0,4:4:9.03:117,9,0	1/1:0,16:16:42.08:525,42,0	1/1:0,12:12:30.05:370,30,0	1/1:0,3:3:6.02:78,6,0	1/1:0,4:4:12.04:156,12,0	1/1:0,10:10:30.01:367,30,0	1/1:0,12:12:36.06:447,36,0	./.	1/1:0,5:5:14.99:175,15,0	1/1:0,15:15:45.15:583,45,0	./.	1/1:0,14:14:42.14:542,42,0	1/1:0,13:13:39.13:506,39,0	1/1:0,20:21:60.20:778,60,0	1/1:0,5:5:15.05:194,15,0
chr10	74554954	.	TAC	T	444.06	PASS	AB=0.894;AC=21;AF=0.438;AN=48;BaseQRankSum=3.882;DP=424;FS=9.150;HRun=0;HaplotypeScore=104.8828;InbreedingCoeff=0.0577;MQ=64.79;MQ0=6;MQRankSum=1.029;QD=1.83;ReadPosRankSum=1.378;VQSLOD=1.4536;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,1:19:6:58,6,0	0/1:1,1:2:26.59:27,0,38	./.	0/1:28,0:10:0:0,0,0	0/0:9,0:9:2.99:0,3,24	0/1:15,3:18:17.59:18,0,138	0/0:12,0:11:9.03:0,9,127	0/0:28,0:27:8.04:0,8,44	1/1:19,3:23:14.98:140,15,0	0/0:15,0:15:3.45:0,3,22	./.	1/1:11,2:14:8.86:79,9,0	1/1:4,1:10:3.01:33,3,0	0/1:13,0:13:33.81:34,0,168	0/0:9,0:9:3.01:0,3,43	0/1:20,0:20:10.28:10,0,119	0/1:27,2:29:5.56:6,0,287	0/0:18,0:17:12.50:0,13,142	1/1:15,0:14:3:26,3,0	0/1:6,0:6:13.97:19,0,14	0/0:14,0:14:6.01:0,6,64	./.	./.	1/1:19,4:23:6.01:65,6,0	0/0:12,0:12:3.01:0,3,45	0/0:9,0:9:5.98:0,6,49	0/1:13,2:15:52.93:53,0,56	0/1:4,2:6:23.71:24,0,45
chr10	74555470	.	TG	T	2665.57	PASS	AB=0.939;AC=21;AF=0.375;AN=56;BaseQRankSum=4.038;DP=546;FS=0.378;HRun=10;HaplotypeScore=73.8522;InbreedingCoeff=0.7476;MQ=81.00;MQ0=2;MQRankSum=-1.658;QD=10.79;ReadPosRankSum=1.774;VQSLOD=3.0282;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,20:26:62.98:546,63,0	0/0:8,0:8:18.05:0,18,199	0/1:42,0:26:32.33:32,0,277	0/0:29,1:18:21.53:0,22,183	0/0:22,2:24:28.08:0,28,530	0/0:14,0:14:26.86:0,27,278	0/0:19,0:19:16.18:0,16,386	1/1:4,0:30:46.36:136,46,0	1/1:1,13:14:38.99:338,39,0	0/0:18,0:18:27.02:0,27,284	0/0:15,0:15:7.13:0,7,297	1/1:3,16:19:47.98:416,48,0	1/1:3,15:18:44.99:390,45,0	0/0:18,0:18:34.68:0,35,385	0/0:23,0:23:54.13:0,54,589	0/0:17,0:17:45.12:0,45,498	0/0:33,0:33:96.24:0,96,1042	1/1:1,0:9:16.30:48,16,0	0/1:16,3:19:16.14:16,0,275	0/1:20,1:21:4.88:5,0,289	0/0:16,0:16:34.16:0,34,342	1/1:3,19:22:56.99:494,57,0	1/1:3,8:11:7.62:166,8,0	1/1:2,13:15:32.99:286,33,0	0/0:18,0:18:42.10:0,42,456	0/0:15,0:15:24.05:0,24,256	0/0:23,2:25:8.19:0,8,537	0/0:4,0:4:12.03:0,12,133
chr10	74560996	.	GCACATACA	G	1276.62	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=6.970;DP=548;FS=35.917;HRun=0;HaplotypeScore=145.0765;InbreedingCoeff=0.8460;MQ=60.69;MQ0=7;MQRankSum=-2.727;QD=32.73;ReadPosRankSum=-1.461;VQSLOD=1.5969;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:60.17:0,60,1345	0/0:4,0:4:12.03:0,12,357	0/0:15,0:5:11.86:0,12,124	./.	0/0:25,0:24:54.12:0,54,1435	0/0:22,0:22:59.15:0,59,1533	0/0:18,0:18:51.15:0,51,1806	1/1:3,18:20:50.90:696,51,0	0/0:17,0:17:51.13:0,51,1657	0/0:30,0:30:66.35:0,66,1579	0/0:8,0:8:17.07:0,17,365	0/0:24,0:24:65.55:0,66,2181	0/0:21,0:21:63.20:0,63,2335	0/0:20,0:20:54.16:0,54,1808	0/0:18,0:18:42.13:0,42,1341	0/0:13,0:13:20.08:0,20,606	0/0:31,0:30:87.22:0,87,2825	1/1:3,15:18:2.43:689,2,0	0/0:26,0:26:66.15:0,66,1730	0/0:19,0:19:48.13:0,48,1619	0/0:21,0:21:56.91:0,57,1842	0/0:10,0:10:27.08:0,27,824	0/0:19,0:19:51.08:0,51,1476	0/0:14,0:14:42.14:0,42,1654	0/0:16,0:16:30.08:0,30,962	0/0:33,0:32:96.21:0,96,2619	0/0:16,0:15:45.12:0,45,1350	0/0:6,0:6:15.03:0,15,537
chr10	74561001	.	TAC	T	539.25	PASS	AB=0.872;AC=8;AF=0.143;AN=56;BaseQRankSum=5.551;DP=566;FS=5.438;HRun=0;HaplotypeScore=91.9576;InbreedingCoeff=-0.1728;MQ=60.02;MQ0=8;MQRankSum=-2.134;QD=3.05;ReadPosRankSum=0.104;VQSLOD=1.8152;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,19:33:70.68:390,0,71	0/0:4,0:4:9.03:0,9,130	0/0:15,1:5:3:0,3,29	0/0:34,0:2:3:0,3,26	0/0:19,3:22:19.90:0,20,441	0/1:15,2:19:54.68:55,0,431	0/0:19,0:19:45.15:0,45,684	0/1:19,0:18:9.39:35,0,9	0/0:18,0:18:10:0,10,480	0/0:32,0:32:20.38:0,20,248	0/0:9,0:9:8.02:0,8,54	0/0:27,0:27:63.13:0,63,748	0/0:24,0:24:66.16:0,66,812	0/0:18,1:19:9.82:0,10,621	0/1:13,4:17:69.81:70,0,367	0/0:11,0:12:17:0,17,127	0/0:32,2:33:39.92:0,40,1061	0/1:19,0:19:36.61:82,0,37	0/0:23,1:24:17.49:0,17,595	0/0:20,0:21:37.02:0,37,684	0/1:25,1:25:15.01:15,0,671	0/1:8,2:10:11.59:12,0,211	0/0:21,1:22:6.69:0,7,405	0/0:15,0:15:42.12:0,42,499	0/0:15,0:15:23.94:0,24,193	0/1:31,3:33:13.34:13,0,746	0/0:16,0:15:36.08:0,36,496	0/0:5,0:5:15.05:0,15,237
chr10	74561016	.	A	ACACG	2714.94	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-6.182;DP=598;FS=0.558;HRun=0;HaplotypeScore=111.3546;InbreedingCoeff=0.8208;MQ=55.44;MQ0=10;MQRankSum=2.853;QD=26.88;ReadPosRankSum=0.869;VQSLOD=3.6468;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:57.07:0,57,638	0/0:5,0:5:14.95:0,15,210	0/0:21,0:5:7.87:0,8,69	0/0:41,0:7:20.71:0,21,154	0/0:22,0:21:44.06:0,44,705	0/0:19,0:19:51.12:0,51,770	0/0:23,0:23:63.13:0,63,991	0/1:28,0:27:86.01:86,0,124	0/0:15,0:15:44.64:0,45,791	1/1:4,27:33:69.71:1563,70,0	1/1:2,7:10:8.86:176,9,0	0/0:28,0:28:55.11:0,55,1126	0/0:24,0:24:69.19:0,69,1177	0/0:20,0:20:54.14:0,54,895	0/0:20,0:20:51.10:0,51,727	1/1:1,12:14:15.05:403,15,0	0/0:29,0:29:84.14:0,84,1386	0/0:22,0:22:33.41:0,33,330	0/0:24,0:23:63.48:0,63,894	0/0:20,0:20:57.15:0,57,918	0/0:29,0:28:74.13:0,74,1042	0/0:12,0:12:29.87:0,30,418	0/0:20,0:21:50.99:0,51,789	0/0:20,0:20:57.11:0,57,894	1/1:0,14:15:24.08:646,24,0	0/0:27,0:25:68.93:0,69,1139	0/0:16,0:15:48.07:0,48,707	0/0:5,0:5:15.05:0,15,274
chr10	74561183	.	TA	T	6376.78	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.440;DP=560;FS=2.850;HRun=4;HaplotypeScore=55.2010;InbreedingCoeff=0.9980;MQ=84.07;MQ0=0;MQRankSum=-0.539;QD=33.74;ReadPosRankSum=1.419;VQSLOD=5.4962;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:54.17:648,54,0	0/0:6,0:6:18.06:0,18,252	0/0:17,0:17:51.10:0,51,680	0/0:16,0:16:37.93:0,38,484	0/0:28,0:28:81.25:0,81,1116	0/0:21,0:21:63.20:0,63,864	0/0:14,0:14:33.11:0,33,462	1/1:2,22:24:66.18:778,66,0	1/1:0,26:26:69.21:828,69,0	0/0:24,0:24:66.21:0,66,910	0/0:22,0:22:66.21:0,66,901	1/1:0,33:33:93.29:1116,93,0	1/1:0,21:21:60.18:720,60,0	0/0:19,0:19:57.19:0,57,798	0/0:23,0:23:57.19:0,57,798	0/0:16,0:16:45.15:0,45,626	0/0:21,0:21:63.19:0,63,852	1/1:0,20:20:60.14:704,60,0	0/0:17,0:17:45.15:0,45,630	0/0:29,0:29:87.29:0,87,1215	0/0:32,0:32:90.26:0,90,1235	1/1:0,11:11:30.09:360,30,0	1/1:0,19:19:54.17:648,54,0	1/1:0,16:16:48.15:576,48,0	0/0:14,0:14:42.14:0,42,583	0/0:23,0:23:66.22:0,66,924	0/0:22,0:22:66.20:0,66,906	0/0:7,0:7:21.05:0,21,276
chr10	74564278	.	T	TAC	9610.69	PASS	AB=0.941;AC=23;AF=0.411;AN=56;BaseQRankSum=-15.939;DP=789;FS=3.677;HRun=0;HaplotypeScore=96.8301;InbreedingCoeff=0.9471;MQ=69.77;MQ0=2;MQRankSum=-0.286;QD=31.61;ReadPosRankSum=6.250;VQSLOD=6.5952;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,21:28:46.04:740,46,0	0/0:9,0:10:23.91:0,24,274	0/0:47,0:37:79.91:0,80,960	0/0:49,0:37:57.09:0,57,653	0/0:41,0:41:99:0,111,1361	0/0:24,0:24:60.18:0,60,731	0/0:26,0:26:54.15:0,54,655	0/0:43,0:43:72.21:0,72,877	1/1:3,22:25:48.16:787,48,0	1/1:6,30:35:90.28:1421,90,0	1/1:3,17:20:42.14:688,42,0	1/1:2,20:22:48.16:787,48,0	1/1:3,26:29:34.92:1091,35,0	0/0:28,0:28:75.22:0,75,916	0/0:38,0:38:81.24:0,81,991	1/1:5,30:34:57.19:935,57,0	0/0:20,0:20:42.08:0,42,501	0/1:15,0:16:3.76:4,0,340	0/0:17,0:17:41.95:0,42,488	0/0:24,0:24:57.10:0,57,672	0/0:39,0:39:99:0,99,1192	1/1:2,15:17:33.11:541,33,0	1/1:3,18:22:51.05:834,51,0	1/1:3,28:30:26.03:947,26,0	1/1:2,21:23:51.17:836,51,0	0/0:29,0:29:68.46:0,68,838	0/0:37,0:37:96.30:0,96,1190	0/0:12,0:12:27.08:0,27,334
chr10	74568599	.	C	CA	1356.97	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.396;DP=682;FS=3.397;HRun=9;HaplotypeScore=64.2638;InbreedingCoeff=0.9921;MQ=79.53;MQ0=0;MQRankSum=0.755;QD=23.40;ReadPosRankSum=-6.242;VQSLOD=1.4479;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:62.93:0,63,538	0/0:16,0:16:47.99:0,48,417	0/0:20,0:21:35.93:0,36,371	0/0:15,0:15:27.26:0,27,215	0/0:32,0:32:83.95:0,84,725	0/0:26,0:26:68.98:0,69,599	0/0:27,0:27:71.98:0,72,625	1/1:11,37:48:99:1180,111,0	0/0:21,0:21:50.97:0,51,443	0/0:37,0:38:91.98:0,92,781	0/0:33,0:33:83.96:0,84,725	0/0:32,0:32:89.98:0,90,781	0/0:27,0:27:77.96:0,78,673	0/0:21,1:22:17.80:0,18,384	0/0:37,0:38:99:0,104,892	0/0:32,0:32:89.96:0,90,777	0/0:8,0:8:24:0,24,208	1/1:1,9:10:27.07:299,27,0	0/0:14,0:14:38.96:0,39,339	0/0:29,1:30:53.79:0,54,692	0/0:9,0:9:23.97:0,24,204	0/0:27,0:27:65.92:0,66,564	0/0:22,0:22:59.98:0,60,521	0/0:12,0:12:29.99:0,30,260	0/0:28,0:28:74.98:0,75,651	0/0:26,0:26:68.97:0,69,599	0/0:29,0:28:80.98:0,81,703	0/0:14,0:14:38.99:0,39,339
chr10	74570064	.	T	TA	736.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.763;DP=603;FS=18.288;HRun=8;HaplotypeScore=53.6551;InbreedingCoeff=0.9138;MQ=74.77;MQ0=0;MQRankSum=-1.233;QD=27.26;ReadPosRankSum=1.037;VQSLOD=2.2199;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:72.21:831,72,0	0/0:12,0:12:33.01:0,33,302	0/0:17,0:17:26.33:0,26,242	0/0:7,0:7:14.96:0,15,129	0/0:34,0:34:80.93:0,81,723	0/0:28,0:28:78.03:0,78,714	0/0:8,0:8:24.01:0,24,220	0/0:16,0:16:39.01:0,39,357	0/0:15,0:15:39.01:0,39,357	0/0:24,0:24:57.02:0,57,522	0/0:23,0:23:63.01:0,63,571	0/0:16,0:16:44.52:0,45,393	0/0:21,0:21:53.98:0,54,486	0/0:18,0:18:44.97:0,45,401	0/0:26,0:26:69.04:0,69,631	0/0:26,0:26:69.02:0,69,628	0/0:21,0:21:54.02:0,54,494	0/0:13,0:13:36.02:0,36,329	0/0:21,1:22:16.39:0,16,404	0/0:42,0:42:99:0,117,1056	0/0:5,0:5:9:0,9,82	0/0:20,0:20:54.02:0,54,494	0/0:25,0:25:72.02:0,72,653	0/0:8,0:8:21.01:0,21,192	0/0:36,0:36:99:0,99,901	0/0:41,0:41:99:0,108,979	0/0:37,0:37:87.03:0,87,791	0/0:15,0:15:38.99:0,39,350
chr10	74570513	.	G	GA	3959.60	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-12.480;DP=598;FS=1.229;HRun=8;HaplotypeScore=56.0229;InbreedingCoeff=0.9688;MQ=75.89;MQ0=0;MQRankSum=-0.304;QD=27.31;ReadPosRankSum=-2.898;VQSLOD=3.1932;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.02:0,60,549	0/0:17,0:17:45.02:0,45,412	0/0:19,0:20:9.97:0,10,224	0/0:12,0:11:6.03:0,6,126	0/0:34,0:34:93.04:0,93,851	0/0:18,0:18:51.03:0,51,467	0/0:12,0:12:33.02:0,33,302	1/1:6,23:29:70.15:798,70,0	0/0:16,0:16:42.02:0,42,384	1/1:7,25:32:78.16:864,78,0	1/1:2,23:25:66.11:732,66,0	0/0:25,0:25:66:0,66,594	0/0:21,0:21:57.02:0,57,522	0/0:18,0:18:39.01:0,39,357	0/0:31,0:31:87.02:0,87,792	1/1:2,20:22:32.71:630,33,0	0/0:19,0:19:54:0,54,489	1/1:1,11:12:27.08:311,27,0	0/0:12,0:12:33.01:0,33,298	0/0:31,0:31:81.02:0,81,737	0/0:13,0:13:33.02:0,33,302	0/0:18,0:18:51.01:0,51,462	0/0:23,0:23:60.03:0,60,549	0/0:18,0:18:54.03:0,54,494	1/1:6,19:25:54.16:623,54,0	0/0:29,1:30:52.42:0,52,734	0/0:31,0:32:95.09:0,95,857	0/0:10,0:10:24:0,24,220
chr10	74571131	.	A	AG	1205.76	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.252;DP=604;FS=0.000;HRun=5;HaplotypeScore=62.3314;InbreedingCoeff=0.9866;MQ=67.70;MQ0=0;MQRankSum=-0.157;QD=33.49;ReadPosRankSum=-1.776;VQSLOD=3.3515;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:18.05:0,18,204	0/0:5,0:5:15.04:0,15,170	0/0:26,0:24:35.30:0,35,513	0/0:17,0:14:24.33:0,24,310	0/0:29,0:29:84.24:0,84,951	0/0:19,0:17:57.13:0,57,624	0/0:21,0:21:60.17:0,60,680	1/1:1,21:22:60.17:798,60,0	0/0:27,0:27:72.19:0,72,807	0/0:24,0:24:72.18:0,72,799	0/0:21,0:21:57.16:0,57,647	0/0:32,0:32:87.23:0,87,977	0/0:25,0:25:75.21:0,75,850	0/0:27,0:27:75.21:0,75,851	0/0:35,0:35:99:0,99,1122	0/0:26,0:26:72.20:0,72,816	0/0:16,0:16:42.12:0,42,476	1/1:1,13:14:39.13:530,39,0	0/0:16,0:16:45.10:0,45,490	0/0:29,0:29:87.25:0,87,986	0/0:25,0:25:72.19:0,72,805	0/0:20,0:20:57.16:0,57,646	0/0:25,0:25:69.18:0,69,773	0/0:15,0:15:39.09:0,39,432	0/0:21,0:21:60.16:0,60,671	0/0:19,0:19:54.14:0,54,604	0/0:24,0:24:69.20:0,69,782	0/0:14,0:14:42.10:0,42,466
chr10	74571588	.	T	TA	1658.67	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-6.713;DP=512;FS=5.760;HRun=9;HaplotypeScore=49.9408;InbreedingCoeff=0.8886;MQ=63.93;MQ0=0;MQRankSum=0.575;QD=19.75;ReadPosRankSum=0.172;VQSLOD=4.0030;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:62.85:0,63,523	0/0:11,0:11:29.99:0,30,260	0/0:4,0:3:3:0,3,26	0/1:7,0:6:2.35:2,0,12	0/0:31,0:31:79.17:0,79,693	0/0:22,0:22:53.94:0,54,466	0/0:12,0:12:26.97:0,27,230	0/0:36,0:36:80.91:0,81,694	1/1:3,9:12:18.05:199,18,0	0/0:21,0:21:56.99:0,57,495	0/0:34,0:34:86.95:0,87,753	1/1:2,18:20:54.15:593,54,0	1/1:4,8:13:17.88:180,18,0	0/0:19,0:18:38.97:0,39,338	0/0:17,0:17:17.61:0,18,310	0/0:23,0:24:58.99:0,59,498	0/0:21,0:23:60.95:0,61,490	0/0:11,0:11:26.88:0,27,216	0/0:20,0:20:39.88:0,40,361	0/0:31,0:31:83.96:0,84,723	0/0:9,0:9:17.99:0,18,156	1/1:0,8:8:24.06:265,24,0	1/1:3,12:15:10.05:337,10,0	1/1:0,9:9:24.06:265,24,0	0/0:19,0:19:47.95:0,48,413	0/0:29,0:29:74.94:0,75,645	0/0:18,0:19:50.02:0,50,422	0/0:13,0:13:38.99:0,39,338
chr10	74573053	.	TA	T	734.97	PASS	AB=0.923;AC=5;AF=0.089;AN=56;BaseQRankSum=6.637;DP=568;FS=2.903;HRun=11;HaplotypeScore=57.6087;InbreedingCoeff=0.6637;MQ=69.04;MQ0=0;MQRankSum=1.409;QD=10.81;ReadPosRankSum=-2.445;VQSLOD=2.4189;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:17:33.39:0,33,333	0/0:7,0:7:18.05:0,18,192	0/1:11,1:10:13.41:13,0,144	0/0:11,0:9:5.94:0,6,42	0/0:23,0:23:57.14:0,57,601	0/0:22,0:22:60.09:0,60,626	0/0:11,0:12:32.91:0,33,327	1/1:15,29:44:83.85:687,84,0	0/0:19,0:19:48.10:0,48,501	0/0:17,0:17:36.09:0,36,382	0/0:22,0:22:57.13:0,57,602	0/0:26,0:26:78.18:0,78,818	0/0:28,0:29:66.88:0,67,686	0/0:19,0:19:51.10:0,51,533	0/0:23,0:23:60.15:0,60,640	0/0:28,0:28:78.19:0,78,826	0/0:12,2:14:11.43:0,11,316	1/1:4,8:12:4.25:153,4,0	0/0:24,0:24:60.12:0,60,616	0/0:27,2:29:50.54:0,51,737	0/0:18,0:18:36.09:0,36,384	0/0:9,0:9:24.05:0,24,250	0/0:14,0:14:33.08:0,33,352	0/0:9,0:9:24.06:0,24,256	0/0:28,1:29:50.48:0,50,707	0/0:25,1:26:33.96:0,34,547	0/0:30,0:31:62.93:0,63,633	0/0:22,0:22:60.15:0,60,640
chr10	74573651	.	AT	A	2849.42	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.492;DP=618;FS=8.873;HRun=8;HaplotypeScore=63.4546;InbreedingCoeff=0.9986;MQ=75.90;MQ0=0;MQRankSum=-0.921;QD=25.22;ReadPosRankSum=1.860;VQSLOD=4.3615;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:39.12:0,39,471	0/0:8,0:8:24.07:0,24,290	0/0:12,0:12:26.29:0,26,288	0/0:13,0:13:24.07:0,24,277	0/0:36,0:36:99:0,102,1221	0/0:31,0:31:87.27:0,87,1049	0/0:13,0:13:39.12:0,39,471	0/0:7,0:38:94.33:0,94,483	1/1:1,10:11:30.04:286,30,0	0/0:33,0:33:84.24:0,84,1002	0/0:29,0:29:87.27:0,87,1050	1/1:2,28:30:84.13:811,84,0	1/1:0,27:27:78.13:753,78,0	0/0:23,0:23:66.18:0,66,782	0/0:26,0:26:69.19:0,69,811	0/0:18,0:18:45.11:0,45,521	0/0:21,0:21:57.17:0,57,687	0/0:2,0:15:40.33:0,40,213	0/0:18,0:18:45.14:0,45,543	0/0:40,0:40:99:0,111,1339	0/0:14,0:14:36.11:0,36,435	1/1:0,11:11:30.05:290,30,0	1/1:2,21:23:59.80:579,60,0	1/1:0,11:11:33.05:319,33,0	0/0:25,0:25:72.22:0,72,870	0/0:28,0:28:75.22:0,75,896	0/0:28,0:28:75.22:0,75,894	0/0:20,0:20:60.18:0,60,724
chr10	74574584	.	A	AGCAT	10285.34	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=0.139;DP=603;FS=12.047;HRun=0;HaplotypeScore=105.6302;InbreedingCoeff=0.9894;MQ=73.55;MQ0=0;MQRankSum=-4.475;QD=65.93;ReadPosRankSum=-0.205;VQSLOD=6.4938;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.15:0,54,970	0/0:7,0:7:21.06:0,21,373	0/0:16,0:16:45.01:0,45,674	0/0:13,0:13:29.28:0,29,584	0/0:27,0:26:81.22:0,81,1440	0/0:26,0:26:78.27:0,78,1493	0/0:20,0:20:60.18:0,60,1097	1/1:5,19:26:72.19:1581,72,0	0/0:27,0:27:78.17:0,78,1341	1/1:1,19:22:66.14:1474,66,0	1/1:3,18:22:54.19:1411,54,0	0/0:24,0:24:72.22:0,72,1293	0/0:26,0:26:78.25:0,78,1461	0/0:17,0:17:45.13:0,45,806	0/0:26,0:26:78.24:0,78,1445	1/1:3,35:39:41.19:2570,41,0	0/0:21,0:21:63.22:0,63,1221	1/1:2,8:10:10.14:703,10,0	0/0:21,0:21:63.20:0,63,1150	0/0:24,0:23:69.22:0,69,1290	0/0:19,0:19:54.17:0,54,1006	0/0:13,0:13:39.13:0,39,756	0/0:16,0:16:45.15:0,45,842	0/0:12,0:12:33.11:0,33,640	1/1:1,34:36:93.32:2546,93,0	0/0:33,0:33:99:0,99,1886	0/0:31,0:31:90.29:0,90,1687	0/0:10,0:10:30.09:0,30,547
chr10	74577716	.	AAATT	A	7974.27	PASS	AB=1.000;AC=23;AF=0.426;AN=54;BaseQRankSum=15.459;DP=498;FS=20.486;HRun=0;HaplotypeScore=81.1097;InbreedingCoeff=0.8874;MQ=59.90;MQ0=0;MQRankSum=-1.616;QD=36.41;ReadPosRankSum=3.661;VQSLOD=3.4023;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:51.17:938,51,0	0/0:14,0:14:39.13:0,39,1030	0/0:1,0:1:3.01:0,3,79	./.	0/0:23,0:23:69.24:0,69,1782	0/0:26,0:26:75.21:0,75,1921	0/0:10,0:10:27.09:0,27,679	0/0:33,0:33:90.30:0,90,2269	1/1:2,10:12:27.09:497,27,0	1/1:1,12:13:36.03:532,36,0	1/1:6,29:35:84.29:1524,84,0	1/1:1,16:17:45.15:808,45,0	1/1:1,15:16:30.03:514,30,0	0/0:14,0:14:42.13:0,42,1055	0/0:23,0:23:63.22:0,63,1651	1/1:1,24:25:60.21:1103,60,0	0/0:27,0:27:72.20:0,72,1702	0/0:14,0:14:33.08:0,33,807	0/0:18,0:18:51.17:0,51,1292	0/0:25,0:25:72.21:0,72,1789	0/0:3,0:3:9.03:0,9,238	1/1:0,6:6:15.05:276,15,0	1/1:0,16:16:33.01:607,33,0	1/1:0,5:5:15.05:276,15,0	1/1:0,20:20:48.16:883,48,0	0/1:34,0:34:17.09:17,0,2187	0/0:34,0:34:99:0,99,2525	0/0:13,0:13:36.06:0,36,889
chr10	74578109	.	A	AT	1299.74	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.655;DP=536;FS=2.126;HRun=6;HaplotypeScore=46.4056;InbreedingCoeff=0.9164;MQ=71.94;MQ0=0;MQRankSum=-0.583;QD=27.65;ReadPosRankSum=-4.471;VQSLOD=1.9138;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:51.11:0,51,520	0/0:8,0:8:24.05:0,24,245	0/0:10,0:10:21.04:0,21,214	0/0:5,0:5:6.01:0,6,62	0/0:31,0:31:90.20:0,90,915	0/0:21,0:21:57.12:0,57,582	0/0:12,0:12:36.06:0,36,360	1/1:6,30:36:90.28:1119,90,0	0/0:15,0:15:39.08:0,39,398	0/0:30,0:30:78.18:0,78,796	0/0:22,0:22:63.12:0,63,631	0/0:25,0:25:72.16:0,72,734	0/0:24,0:24:66.12:0,66,659	0/0:19,0:19:57.11:0,57,573	0/0:26,0:26:69.14:0,69,697	0/0:25,0:25:72.16:0,72,733	0/0:16,0:16:48.11:0,48,490	1/1:1,10:11:24.08:302,24,0	0/0:23,0:23:66.14:0,66,668	0/0:35,0:35:96.21:0,96,979	0/0:10,0:10:27.06:0,27,276	0/0:15,0:15:39.09:0,39,398	0/0:21,0:21:57.13:0,57,582	0/0:8,0:8:24.05:0,24,244	0/0:15,0:15:39.06:0,39,390	0/0:18,0:18:48.11:0,48,490	0/0:30,0:30:90.16:0,90,902	0/0:3,0:3:9.02:0,9,92
chr10	74578355	.	TACACAC	T	505.22	PASS	AB=0.938;AC=14;AF=0.259;AN=54;BaseQRankSum=4.253;DP=510;FS=0.000;HRun=0;HaplotypeScore=111.4741;InbreedingCoeff=0.6479;MQ=71.23;MQ0=15;MQRankSum=-3.517;QD=4.07;ReadPosRankSum=-0.260;VQSLOD=1.8283;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,2:19:0.47:1,0,0	0/0:3,0:3:3.01:0,3,74	0/0:38,0:24:1.25:0,1,3	./.	0/0:19,0:22:36.10:0,36,718	0/0:20,0:20:27.09:0,27,677	0/0:17,0:18:24.08:0,24,591	0/0:31,0:28:9.50:0,10,224	1/1:11,3:17:9.81:141,10,0	0/0:10,0:16:31.66:0,32,697	0/0:13,0:13:6.49:0,6,171	1/1:12,3:19:9.78:135,10,0	1/1:15,0:15:9.89:138,10,0	0/0:12,0:15:27.09:0,27,664	0/0:25,0:24:36.59:0,37,1044	0/0:8,0:26:24.08:0,24,627	0/0:17,0:17:15.94:0,16,398	0/1:10,0:10:6.77:7,0,174	0/0:17,0:17:18.95:0,19,420	0/0:18,0:18:30.05:0,30,647	0/0:26,0:24:24.08:0,24,681	1/1:13,2:15:3.01:61,3,0	1/1:9,5:14:8.75:172,9,0	0/1:12,2:14:0:0,0,0	0/0:14,0:13:12.04:0,12,349	0/0:15,0:15:24.08:0,24,573	0/0:10,0:12:15.05:0,15,296	0/0:6,0:6:3.01:0,3,86
chr10	74578578	.	CA	C	1089.08	PASS	AB=0.869;AC=16;AF=0.286;AN=56;BaseQRankSum=6.902;DP=508;FS=4.712;HRun=14;HaplotypeScore=61.0324;InbreedingCoeff=0.3718;MQ=77.95;MQ0=0;MQRankSum=-0.304;QD=5.21;ReadPosRankSum=3.268;VQSLOD=2.1911;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,11:18:11.96:210,12,0	0/0:6,0:7:17.86:0,18,154	0/0:23,0:16:7.80:0,8,53	0/0:12,0:11:0.95:0,1,33	0/0:24,0:24:39.53:0,40,497	0/0:22,0:22:51.06:0,51,474	0/0:13,0:14:35.83:0,36,312	0/0:18,0:39:78.43:0,78,500	0/0:14,2:16:15.28:0,15,268	1/1:5,20:25:31.64:362,32,0	1/1:7,15:20:13.75:239,14,0	0/1:12,2:15:11.30:11,0,172	0/0:14,0:14:17.99:0,18,156	0/0:19,1:20:21.45:0,21,337	0/0:18,1:20:21.74:0,22,351	1/1:4,10:17:11.11:195,11,0	0/0:12,0:12:19.96:0,20,156	0/0:5,0:6:2.84:0,3,14	0/1:11,3:15:21.20:21,0,123	0/1:19,3:25:14.78:15,0,308	0/1:10,2:12:11.14:11,0,189	0/0:18,1:19:6.25:0,6,249	0/1:15,1:16:10.59:11,0,175	0/0:10,1:11:6.45:0,6,202	1/1:2,10:15:8.02:175,8,0	0/1:24,4:29:14.02:14,0,287	0/0:19,1:21:36.22:0,36,451	0/0:16,0:17:47.82:0,48,417
chr10	74581871	.	G	GA	692.74	PASS	AB=0.956;AC=16;AF=0.286;AN=56;BaseQRankSum=1.310;DP=558;FS=1.811;HRun=16;HaplotypeScore=84.1817;InbreedingCoeff=0.2400;MQ=55.75;MQ0=24;MQRankSum=-3.106;QD=2.74;ReadPosRankSum=-0.830;VQSLOD=-0.1786;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:17,4:19:3.74:119,0,4	0/0:6,0:6:11.56:0,12,66	0/0:31,0:11:13.20:0,13,75	0/1:21,0:10:3.18:16,0,3	0/0:22,0:24:33.40:0,33,188	0/0:16,0:18:29.98:0,30,156	0/0:17,0:18:27.08:0,27,143	0/1:18,0:18:33.53:34,0,38	0/0:13,0:13:20.40:0,20,98	1/1:14,0:14:17.43:123,17,0	1/1:19,4:23:14.32:181,14,0	0/0:17,0:18:27.34:0,27,141	0/1:16,0:15:24.99:25,0,63	0/0:24,0:25:13.91:0,14,136	0/0:20,0:18:29.91:0,30,166	1/1:18,3:21:1.61:174,2,0	0/0:20,0:21:20.96:0,21,121	0/1:15,1:16:24.96:25,0,69	0/0:31,1:33:26.80:0,27,243	0/0:18,0:17:3.83:0,4,68	0/0:9,0:9:1.97:0,2,71	0/1:15,0:15:14.16:14,0,80	0/0:22,0:21:27.09:0,27,139	0/0:16,0:16:20.46:0,20,109	1/1:9,21:31:4.04:117,4,0	0/1:17,3:18:14.16:14,0,89	0/1:34,0:34:17.20:17,0,133	0/0:12,0:11:22.27:0,22,117
chr10	74584318	.	AAAAC	A	1113.11	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.667;DP=446;FS=8.462;HRun=0;HaplotypeScore=68.8444;InbreedingCoeff=0.7751;MQ=63.44;MQ0=6;MQRankSum=-0.789;QD=17.67;ReadPosRankSum=-2.797;VQSLOD=1.4250;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:61.72:0,62,1368	0/0:2,0:2:3.01:0,3,36	0/0:21,0:13:16.01:0,16,420	0/0:14,0:5:3.01:0,3,66	0/0:22,0:22:48.12:0,48,947	0/0:27,0:27:69.24:0,69,1597	0/0:6,0:6:9.03:0,9,206	1/1:24,17:40:51.05:650,51,0	0/0:13,0:13:30.10:0,30,697	0/0:17,0:17:27.09:0,27,632	0/0:17,0:17:33.11:0,33,770	0/0:16,0:16:39.13:0,39,924	0/0:11,0:11:15.05:0,15,315	0/0:7,0:7:15.05:0,15,362	0/0:15,0:15:33.11:0,33,797	0/0:13,0:13:33.11:0,33,755	0/0:40,0:40:67.76:0,68,1738	1/1:6,16:22:36.12:583,36,0	0/0:18,0:16:33.10:0,33,700	0/0:8,0:8:18.06:0,18,407	0/0:8,0:8:18.06:0,18,409	0/0:5,0:5:9.03:0,9,199	0/0:12,0:12:27.07:0,27,565	0/0:13,0:12:33.11:0,33,764	0/0:12,0:12:30.10:0,30,725	0/0:15,0:15:36.12:0,36,842	0/0:15,0:15:36.12:0,36,865	0/0:6,0:6:18.06:0,18,424
chr10	74585570	.	T	TG	6747.08	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-7.830;DP=499;FS=3.591;HRun=6;HaplotypeScore=46.1996;InbreedingCoeff=0.9898;MQ=74.11;MQ0=0;MQRankSum=-1.076;QD=30.95;ReadPosRankSum=4.738;VQSLOD=5.0603;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,46:47:99:1430,117,0	0/0:3,0:3:9.01:0,9,85	0/0:13,0:12:24.05:0,24,245	0/0:13,0:13:21.46:0,21,332	0/0:17,0:17:45.10:0,45,457	0/0:18,0:18:45.08:0,45,449	0/0:25,0:25:66.09:0,66,655	0/0:26,0:26:57.12:0,57,576	1/1:0,11:11:27.03:321,27,0	1/1:1,14:15:45.11:537,45,0	1/1:2,11:13:33.05:396,33,0	1/1:3,17:20:45.09:547,45,0	1/1:3,17:20:50.95:639,51,0	0/0:16,0:16:48.07:0,48,478	0/0:23,0:23:69.10:0,69,681	1/1:1,33:34:75.13:920,75,0	0/0:22,0:22:66.11:0,66,662	0/0:16,0:16:45.10:0,45,458	0/0:10,0:10:24.05:0,24,244	0/0:9,0:9:24.05:0,24,245	0/0:22,0:22:54.07:0,54,535	1/1:0,15:15:42.13:527,42,0	1/1:0,11:11:33.11:413,33,0	1/1:1,18:19:42.13:528,42,0	1/1:0,13:13:39.12:488,39,0	0/0:22,1:23:31.41:0,31,630	0/0:16,0:16:42.05:0,42,417	0/0:9,0:9:27.06:0,27,275
chr10	74586072	.	GA	G	509.36	PASS	AC=16;AF=0.889;AN=18;BaseQRankSum=-1.736;DP=22;FS=11.761;HRun=1;HaplotypeScore=17.4104;MQ=66.02;MQ0=0;MQRankSum=-1.736;QD=29.96;ReadPosRankSum=0.579;VQSLOD=1.5099;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:1,0:0:2.04:0,2,6	./.	./.	./.	1/1:0,4:4:12.04:167,12,0	./.	./.	1/1:0,2:2:6.02:84,6,0	1/1:0,2:2:3.01:41,3,0	./.	./.	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:42,3,0	./.	1/1:0,4:4:6.02:84,6,0	1/1:0,2:2:6.02:84,6,0	./.	./.	1/1:0,1:1:3.01:42,3,0	1/1:0,1:1:3.01:42,3,0	./.	./.
chr10	74586109	.	GA	G	1263.19	PASS	AC=30;AF=0.938;AN=32;DP=53;FS=0.000;HRun=1;HaplotypeScore=24.4103;InbreedingCoeff=0.0048;MQ=46.20;MQ0=0;QD=25.78;VQSLOD=3.1588;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:6:18.06:244,18,0	1/1:0,1:1:3.01:42,3,0	./.	./.	./.	./.	1/1:1,9:10:27.03:335,27,0	1/1:1,3:4:5.98:61,6,0	./.	1/1:0,4:4:5.99:64,6,0	0/0:0,1:1:0:0,0,0	1/1:0,1:1:3.01:38,3,0	./.	1/1:0,1:1:3.01:42,3,0	./.	1/1:0,1:1:3.01:41,3,0	1/1:0,8:7:12.04:166,12,0	1/1:0,3:3:6.02:83,6,0	1/1:0,1:1:3.01:42,3,0	./.	1/1:1,3:4:5.72:53,6,0	./.	./.	1/1:0,1:1:3.01:42,3,0	1/1:0,3:3:3.01:42,3,0	1/1:0,1:1:3.01:42,3,0	./.	./.
chr10	74586115	.	GA	G	1644.20	PASS	AC=36;AF=0.947;AN=38;BaseQRankSum=-1.654;DP=63;FS=0.000;HRun=1;HaplotypeScore=23.2447;InbreedingCoeff=-0.0088;MQ=47.41;MQ0=0;MQRankSum=-0.630;QD=27.87;ReadPosRankSum=-1.260;VQSLOD=2.8699;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:21.07:287,21,0	1/1:0,1:1:3.01:42,3,0	./.	./.	1/1:0,1:1:3.01:42,3,0	./.	1/1:0,11:11:30.09:389,30,0	1/1:0,3:3:6.02:83,6,0	./.	1/1:0,4:4:6.02:83,6,0	./.	1/1:0,1:1:3.01:38,3,0	./.	1/1:0,1:1:3.01:42,3,0	./.	1/1:0,1:1:3.01:41,3,0	1/1:0,10:9:15.05:208,15,0	1/1:0,4:4:9.03:125,9,0	1/1:0,1:1:3.01:42,3,0	1/1:1,1:2:3.01:42,3,0	1/1:0,3:3:2.97:42,3,0	./.	0/0:1,0:1:0.47:0,0,1	1/1:0,1:1:3.01:42,3,0	1/1:3,2:5:4.43:65,4,0	1/1:0,2:2:6.02:84,6,0	1/1:1,0:1:3:25,3,0	./.
chr10	74586202	.	GA	G	191.05	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=4.864;DP=228;FS=2.431;HRun=13;HaplotypeScore=41.8047;InbreedingCoeff=0.3769;MQ=100.39;MQ0=3;MQRankSum=0.477;QD=10.61;ReadPosRankSum=-0.646;VQSLOD=2.4484;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:59.82:0,60,544	./.	0/0:33,0:20:0.87:0,1,137	0/0:35,0:19:0.98:0,1,114	0/0:7,0:7:18.01:0,18,169	0/0:3,0:3:6.01:0,6,58	0/0:17,0:17:42.07:0,42,408	1/1:4,7:11:20.66:152,21,0	0/0:1,0:1:3:0,3,29	0/0:2,0:2:6:0,6,54	0/0:3,0:3:2.97:0,3,21	0/0:3,0:3:5.97:0,6,49	0/0:3,0:3:9.01:0,9,88	0/0:3,0:4:11.84:0,12,95	0/0:1,0:1:3:0,3,29	0/0:2,0:2:6.01:0,6,58	0/0:21,1:24:40.67:0,41,508	1/1:0,7:7:20.88:153,21,0	0/0:6,0:6:12.01:0,12,113	0/0:3,0:3:9.01:0,9,88	0/0:6,1:7:5.60:0,6,58	0/0:1,0:1:3:0,3,29	0/0:2,0:2:3:0,3,29	0/0:7,0:7:18.03:0,18,174	0/0:8,0:8:24:0,24,217	0/0:10,0:10:23.99:0,24,220	0/0:3,0:3:9.01:0,9,83	0/0:1,0:1:3:0,3,29
chr10	74587543	.	T	TC	381.18	PASS	AB=0.909;AC=7;AF=0.125;AN=56;BaseQRankSum=3.086;DP=499;FS=2.335;HRun=1;HaplotypeScore=77.5819;InbreedingCoeff=0.0947;MQ=55.14;MQ0=24;MQRankSum=-0.737;QD=4.76;ReadPosRankSum=0.432;VQSLOD=0.3775;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:52.92:0,53,310	0/0:4,0:4:11.25:0,11,133	0/0:42,0:11:19.11:0,19,238	0/0:45,0:12:29.56:0,30,231	0/0:23,0:23:58.40:0,58,609	0/0:17,0:17:47.87:0,48,556	0/0:9,0:9:23.95:0,24,263	0/1:22,15:39:99:428,0,158	0/1:8,0:7:4.78:5,0,21	0/0:21,0:20:55.94:0,56,686	0/0:17,0:17:48.84:0,49,540	0/0:13,0:12:5.06:0,5,75	0/1:9,0:9:0.30:0,0,77	0/0:8,0:8:20.99:0,21,249	0/0:19,0:19:45.11:0,45,550	0/0:18,0:18:47.73:0,48,496	0/0:20,0:19:45.03:0,45,499	0/1:10,1:12:38.33:38,0,56	0/0:20,0:17:50.85:0,51,553	0/0:21,0:21:59.80:0,60,672	0/0:7,0:6:18.04:0,18,210	0/0:2,0:2:0.41:0,0,9	0/1:8,0:7:5.78:6,0,13	1/1:3,0:3:2.04:6,2,0	0/0:17,0:17:26.97:0,27,267	0/0:23,0:23:68.62:0,69,806	0/0:25,0:23:51.86:0,52,547	0/0:19,0:17:42.13:0,42,556
chr10	74587553	.	CT	C	432.80	PASS	AB=0.966;AC=9;AF=0.161;AN=56;BaseQRankSum=3.488;DP=492;FS=2.865;HRun=11;HaplotypeScore=75.7462;InbreedingCoeff=0.5592;MQ=47.93;MQ0=31;MQRankSum=-0.570;QD=4.20;ReadPosRankSum=1.543;VQSLOD=1.0294;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:27,1:27:19.50:55,0,20	0/0:4,0:4:6.02:0,6,64	0/0:36,0:7:10.13:0,10,76	0/0:42,1:11:7.16:0,7,78	0/0:20,0:20:44.48:0,44,404	0/0:17,0:15:36.12:0,36,283	0/0:11,0:10:16.71:0,17,179	0/0:41,0:41:24.99:0,25,180	0/0:9,0:8:6:0,6,56	1/1:10,13:22:3.25:163,3,0	1/1:16,4:19:17.20:131,17,0	0/0:11,0:10:4.19:0,4,21	0/0:10,0:10:5.32:0,5,61	0/0:11,0:11:23.82:0,24,219	0/0:17,0:16:33.07:0,33,334	1/1:15,2:17:13.24:165,13,0	0/0:17,0:14:26.21:0,26,235	0/0:14,0:13:4.86:0,5,39	0/0:14,1:12:6.92:0,7,224	0/0:19,0:19:36.35:0,36,372	0/0:7,0:5:9.93:0,10,70	0/0:3,0:2:2.98:0,3,22	0/0:10,0:8:6.86:0,7,39	0/0:5,0:5:6.48:0,6,59	1/1:5,10:15:8.84:63,9,0	0/0:21,0:22:45.60:0,46,360	0/0:24,0:22:23.30:0,23,369	0/0:20,0:17:31.08:0,31,286
chr10	74587561	.	TTTTC	T	1058.50	PASS	AB=0.990;AC=16;AF=0.286;AN=56;BaseQRankSum=6.225;DP=473;FS=19.826;HRun=0;HaplotypeScore=84.1668;InbreedingCoeff=0.4213;MQ=40.09;MQ0=38;MQRankSum=-3.397;QD=5.27;ReadPosRankSum=-3.111;VQSLOD=-0.4777;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:27:29.73:106,0,30	0/0:3,0:3:5.94:0,6,119	0/0:33,0:5:5.82:0,6,123	0/0:39,0:7:11.92:0,12,150	0/0:20,0:19:42.04:0,42,639	0/0:17,0:15:40.49:0,40,562	0/0:12,0:10:9.77:0,10,317	1/1:31,4:34:13.61:452,14,0	0/0:8,0:6:9.01:0,9,100	1/1:21,0:19:15.08:133,15,0	1/1:20,0:17:20.64:162,21,0	0/1:9,0:8:1.87:5,0,2	0/1:10,0:10:25.30:44,0,25	0/0:12,0:12:26.77:0,27,441	0/0:16,0:15:31.90:0,32,493	1/1:17,0:17:23.70:174,24,0	0/0:18,0:15:26.95:0,27,433	0/1:14,1:14:44.20:105,0,44	0/0:16,0:12:33.01:0,33,461	0/0:17,0:17:37.95:0,38,629	0/0:6,0:4:11.61:0,12,92	0/0:4,0:2:3.84:0,4,12	0/1:10,0:7:8.35:8,0,14	0/0:6,0:5:2.74:0,3,25	1/1:16,0:15:2.32:39,2,0	0/1:20,0:20:0.44:0,0,495	0/0:25,0:23:49.17:0,49,709	0/0:20,0:13:10.26:0,10,454
chr10	74587569	.	TTC	T	1798.77	PASS	AB=0.964;AC=29;AF=0.518;AN=56;BaseQRankSum=4.902;DP=450;FS=2.149;HRun=0;HaplotypeScore=64.8619;InbreedingCoeff=0.4879;MQ=38.80;MQ0=40;MQRankSum=-3.148;QD=6.89;ReadPosRankSum=-3.789;VQSLOD=2.0603;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:27:25.14:273,25,0	0/0:2,0:2:5.59:0,6,34	0/0:27,0:4:5.91:0,6,81	0/0:37,0:6:4.73:0,5,56	0/0:21,0:20:20.34:0,20,233	0/0:17,0:15:18.70:0,19,201	0/1:11,0:9:6.20:6,0,179	1/1:29,0:29:41.15:366,41,0	1/1:8,0:6:8.90:60,9,0	1/1:17,2:17:35.83:301,36,0	1/1:19,1:17:26.12:232,26,0	1/1:7,0:6:5.54:28,6,0	1/1:11,0:10:8.75:105,9,0	0/0:12,0:12:12.02:0,12,187	0/0:14,0:13:17.89:0,18,138	1/1:14,0:14:35.68:283,36,0	0/1:18,0:14:6.22:6,0,115	1/1:17,0:14:13.24:83,13,0	0/0:15,0:11:15.16:0,15,212	0/0:19,0:19:32.41:0,32,296	0/1:7,0:5:9.64:10,0,37	0/1:7,0:3:8.67:31,0,9	1/1:10,0:7:11.84:78,12,0	0/1:4,2:5:4.03:22,0,4	1/1:13,1:13:11.84:78,12,0	0/1:16,0:16:29.25:29,0,180	0/0:24,0:22:27.52:0,28,310	0/1:17,0:10:2.33:2,0,197
chr10	74587789	.	CT	C	778.92	PASS	AB=0.835;AC=25;AF=0.446;AN=56;BaseQRankSum=7.689;DP=476;FS=2.849;HRun=16;HaplotypeScore=54.5700;InbreedingCoeff=0.5317;MQ=70.01;MQ0=5;MQRankSum=0.647;QD=3.19;ReadPosRankSum=5.183;VQSLOD=-0.6772;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,6:41:10.58:0,11,340	0/0:11,0:11:17.94:0,18,142	0/0:24,0:15:10.57:0,11,76	0/0:5,0:3:2.88:0,3,15	0/1:10,1:12:15.64:16,0,81	0/1:16,5:21:24.23:24,0,229	0/1:11,4:16:11.36:11,0,111	0/0:17,2:20:14.76:0,15,210	1/1:1,0:15:20.36:59,20,0	1/1:7,10:17:4.81:128,5,0	1/1:7,11:19:30.65:184,31,0	1/1:6,1:19:18.66:64,19,0	1/1:2,2:13:22.15:83,22,0	0/1:19,4:24:9.35:9,0,229	0/0:14,1:19:1.81:0,2,128	1/1:8,8:19:27.41:155,27,0	0/0:15,1:16:17.91:0,18,252	0/0:15,0:14:17.94:0,18,142	0/0:19,0:18:23.95:0,24,195	0/0:17,0:19:26.72:0,27,198	0/1:11,4:15:20.97:21,0,52	1/1:3,1:9:6.95:30,7,0	1/1:3,0:8:8.09:23,8,0	1/1:6,0:22:26.39:76,26,0	1/1:4,6:12:15.79:97,16,0	0/0:19,0:19:23.94:0,24,194	0/0:12,0:12:26.96:0,27,224	0/0:11,0:11:8.98:0,9,73
chr10	74588620	.	GCC	G	15804.25	PASS	AB=0.717;AC=54;AF=0.964;AN=56;BaseQRankSum=-0.555;DP=402;FS=11.314;HRun=4;HaplotypeScore=187.7509;InbreedingCoeff=-0.0438;MQ=58.44;MQ0=0;MQRankSum=-3.729;QD=39.31;ReadPosRankSum=2.675;VQSLOD=2.9566;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:36.12:518,36,0	1/1:0,6:6:18.06:265,18,0	0/1:2,3:6:39.98:147,0,40	0/1:8,2:8:92.59:93,0,111	1/1:1,23:24:57.19:824,57,0	1/1:1,17:18:54.17:775,54,0	1/1:1,11:12:33.11:485,33,0	1/1:2,19:21:60.16:859,60,0	1/1:0,16:16:42.14:618,42,0	1/1:0,15:15:45.15:662,45,0	1/1:0,19:19:57.19:836,57,0	1/1:1,10:10:27.09:397,27,0	1/1:2,10:12:36.12:527,36,0	1/1:0,12:12:36.12:529,36,0	1/1:0,20:20:60.20:882,60,0	1/1:2,20:22:63.20:908,63,0	1/1:0,7:7:18.06:265,18,0	1/1:0,3:3:9.03:132,9,0	1/1:0,12:11:30.10:441,30,0	1/1:0,20:20:57.19:837,57,0	1/1:2,12:14:27.09:397,27,0	1/1:1,14:15:42.14:617,42,0	1/1:0,21:21:63.21:926,63,0	1/1:2,7:8:24.08:349,24,0	1/1:0,17:16:48.16:706,48,0	1/1:3,15:17:42.14:618,42,0	1/1:0,26:26:75.25:1103,75,0	1/1:0,2:2:6.02:88,6,0
chr10	74588631	.	T	TG	917.82	PASS	AB=0.957;AC=37;AF=0.661;AN=56;BaseQRankSum=-5.416;DP=420;FS=44.200;HRun=0;HaplotypeScore=244.6319;InbreedingCoeff=-0.1689;MQ=56.74;MQ0=0;MQRankSum=1.941;QD=2.27;ReadPosRankSum=1.657;VQSLOD=1.1620;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,1:12:4.43:34,0,4	1/1:8,0:8:0.17:13,0,0	0/1:4,1:5:20.93:25,0,21	0/1:10,1:9:11:11,0,43	0/1:24,1:25:0.81:81,0,1	1/1:21,1:22:0.88:71,1,0	0/1:12,0:12:6.06:7,0,6	1/1:22,1:23:31.11:162,31,0	0/1:16,0:16:11.95:28,0,12	1/1:17,0:17:10.17:35,10,0	0/1:24,0:24:17:19,0,17	0/1:11,0:10:1.26:14,0,1	0/1:10,0:10:3.75:6,0,4	0/0:14,0:14:0.18:0,0,8	0/1:21,1:22:0.87:62,0,1	1/1:24,0:24:1.81:48,2,0	0/1:5,1:6:0.34:10,0,0	1/1:3,0:3:4.38:22,4,0	1/1:13,0:12:20.97:97,21,0	0/1:18,2:20:6.91:73,0,7	0/1:10,0:10:0.73:6,0,1	0/1:14,0:13:6.98:10,0,7	0/1:20,0:20:4.82:5,0,25	1/1:5,1:5:4.95:41,5,0	1/1:25,0:24:4.68:63,5,0	1/1:18,0:17:18.24:79,18,0	1/1:27,0:27:1.39:21,1,0	0/0:2,0:2:0.94:0,1,2
chr10	74588688	.	C	CA	8206.44	PASS	AB=0.923;AC=55;AF=0.982;AN=56;BaseQRankSum=2.776;DP=445;FS=6.283;HRun=4;HaplotypeScore=202.5338;InbreedingCoeff=-0.0226;MQ=65.53;MQ0=0;MQRankSum=-2.776;QD=18.44;ReadPosRankSum=0.865;VQSLOD=3.2851;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:11:29.17:186,29,0	1/1:2,6:8:17.87:170,18,0	1/1:2,6:8:19.02:181,19,0	0/1:11,1:12:28.59:57,0,29	1/1:6,15:21:46.91:388,47,0	1/1:7,18:25:53.16:412,53,0	1/1:10,14:23:52.92:424,53,0	1/1:13,16:30:80.50:716,81,0	1/1:4,8:12:20.85:220,21,0	1/1:2,20:21:52.10:467,52,0	1/1:3,17:20:46.73:336,47,0	1/1:2,16:18:47.11:368,47,0	1/1:1,10:11:29.50:256,30,0	1/1:2,14:16:40.77:295,41,0	1/1:3,16:18:50.06:394,50,0	1/1:7,15:22:44.26:298,44,0	1/1:1,8:9:20.79:184,21,0	1/1:0,6:6:17.93:143,18,0	1/1:3,8:11:23.99:229,24,0	1/1:0,20:19:51.53:396,52,0	1/1:1,12:13:35.01:232,35,0	1/1:1,14:14:37.48:292,37,0	1/1:2,14:16:37.75:293,38,0	1/1:4,4:8:5.70:29,6,0	1/1:3,20:22:55.60:361,56,0	1/1:2,17:17:47.50:371,48,0	1/1:1,20:21:58.73:401,59,0	1/1:2,3:5:14.78:110,15,0
chr10	74588695	.	TG	T	7696.91	PASS	AB=0.818;AC=55;AF=0.982;AN=56;BaseQRankSum=2.638;DP=404;FS=6.132;HRun=2;HaplotypeScore=186.2251;InbreedingCoeff=-0.0259;MQ=60.65;MQ0=0;MQRankSum=-3.171;QD=19.05;ReadPosRankSum=1.547;VQSLOD=4.6322;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:11:28.70:186,29,0	1/1:2,4:6:11.60:80,12,0	1/1:1,5:6:16.63:134,17,0	0/1:7,2:9:34.17:56,0,34	1/1:1,18:19:46.73:411,47,0	1/1:0,21:21:61.61:492,62,0	1/1:5,17:21:55.54:476,56,0	1/1:7,19:26:71.26:623,71,0	1/1:1,7:8:11.69:95,12,0	1/1:2,20:21:50.83:426,51,0	1/1:1,19:20:51.96:383,52,0	1/1:0,16:16:46.51:335,47,0	1/1:1,10:11:29.16:236,29,0	1/1:1,13:14:36.99:228,37,0	1/1:0,17:17:49.64:385,50,0	1/1:0,17:17:46.82:327,47,0	1/1:0,9:9:23.64:209,24,0	1/1:0,6:6:17.85:131,18,0	1/1:0,8:8:23.93:212,24,0	1/1:1,20:20:53.26:399,53,0	1/1:0,12:12:31.37:174,31,0	1/1:0,15:14:36.68:286,37,0	1/1:3,12:15:33.96:229,34,0	1/1:0,7:7:5.85:52,6,0	1/1:0,22:21:57.62:340,58,0	1/1:1,17:16:44.19:326,44,0	1/1:0,20:20:54.88:322,55,0	1/1:0,5:5:14.81:142,15,0
chr10	74588887	.	A	AT	2752.96	PASS	AB=0.900;AC=13;AF=0.232;AN=56;BaseQRankSum=-9.402;DP=595;FS=4.498;HRun=9;HaplotypeScore=76.5168;InbreedingCoeff=0.8378;MQ=65.65;MQ0=0;MQRankSum=-1.002;QD=21.68;ReadPosRankSum=1.065;VQSLOD=4.4750;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,869	0/0:7,0:7:20.98:0,21,179	0/0:8,0:9:14.01:0,14,108	0/0:7,0:6:5.98:0,6,50	0/0:32,0:32:71.45:0,71,592	0/0:24,0:24:65.93:0,66,562	0/0:24,0:24:59.95:0,60,513	0/0:40,0:40:99:0,105,905	0/0:20,0:20:50.98:0,51,443	0/0:15,0:15:32.98:0,33,284	0/0:24,0:24:62.89:0,63,533	0/0:22,0:22:56.84:0,57,471	0/0:31,0:31:83.91:0,84,713	0/0:28,0:28:74.72:0,75,617	0/0:24,0:24:65.85:0,66,553	0/0:21,0:21:47.86:0,48,395	0/0:30,0:30:80.94:0,81,694	0/0:14,0:14:32.95:0,33,281	1/1:4,17:21:28.01:499,28,0	1/1:0,18:18:54.11:584,54,0	1/1:4,11:15:27.07:299,27,0	0/1:8,1:9:15.15:15,0,112	0/0:25,0:25:68.91:0,69,588	0/0:19,0:19:50.99:0,51,442	0/0:17,0:17:47.98:0,48,417	1/1:5,16:21:2.12:479,2,0	1/1:2,26:28:69.12:748,69,0	1/1:5,9:15:29.91:312,30,0
chr10	74589334	.	TTTA	T	2299.14	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.452;DP=662;FS=0.000;HRun=0;HaplotypeScore=93.4319;InbreedingCoeff=0.9997;MQ=84.28;MQ0=0;MQRankSum=-5.015;QD=42.58;ReadPosRankSum=-2.049;VQSLOD=4.4749;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,3091	0/0:13,0:13:39.13:0,39,922	0/0:15,0:15:39.13:0,39,917	0/0:26,0:26:71.78:0,72,1502	0/0:24,0:24:72.25:0,72,1701	0/0:25,0:25:75.24:0,75,1728	0/0:18,0:18:54.19:0,54,1277	1/1:4,34:38:99:1768,102,0	0/0:25,0:25:75.22:0,75,1593	0/0:29,0:29:87.29:0,87,1904	0/0:27,0:27:81.27:0,81,1857	0/0:14,0:14:42.14:0,42,978	0/0:22,0:22:63.22:0,63,1486	0/0:17,0:17:48.16:0,48,1135	0/0:28,0:28:81.28:0,81,1914	0/0:28,0:28:81.28:0,81,1912	0/0:33,0:33:99:0,99,2266	1/1:0,16:16:39.09:653,39,0	0/0:21,0:21:63.22:0,63,1490	0/0:25,0:25:75.26:0,75,1743	0/0:31,0:31:90.30:0,90,2060	0/0:16,0:16:48.16:0,48,1135	0/0:23,0:23:69.21:0,69,1483	0/0:20,0:19:60.21:0,60,1419	0/0:15,0:15:45.15:0,45,1006	0/0:24,0:24:69.23:0,69,1574	0/0:27,0:26:81.22:0,81,1863	0/0:17,0:17:33.11:0,33,757
chr10	74590045	.	T	TTA	574.60	PASS	AB=0.786;AC=12;AF=0.462;AN=26;BaseQRankSum=-2.307;DP=185;FS=8.890;HRun=0;HaplotypeScore=26.6010;InbreedingCoeff=0.2180;MQ=77.38;MQ0=1;MQRankSum=-1.891;QD=6.92;ReadPosRankSum=-2.411;VQSLOD=0.6885;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:2,0:2:2.98:0,3,22	./.	0/1:12,0:8:6.87:7,0,19	./.	0/0:12,0:15:29.58:0,30,283	0/0:3,0:4:5.85:0,6,48	1/1:19,0:18:19.48:189,19,0	./.	./.	./.	./.	./.	0/0:5,0:5:6.01:0,6,65	./.	./.	0/0:8,0:12:17.55:0,18,145	1/1:8,0:8:3.01:42,3,0	0/1:3,2:5:6.76:77,0,7	./.	0/1:4,2:7:8.14:41,0,8	./.	./.	./.	./.	1/1:5,3:8:9.03:137,9,0	1/1:6,1:7:3.01:46,3,0	0/1:8,3:16:50.89:148,0,51
chr10	74590875	.	CT	C	1743.70	PASS	AB=0.751;AC=22;AF=0.393;AN=56;BaseQRankSum=11.011;DP=402;FS=4.287;HRun=11;HaplotypeScore=51.2002;InbreedingCoeff=0.6018;MQ=67.32;MQ0=2;MQRankSum=0.013;QD=10.50;ReadPosRankSum=2.060;VQSLOD=2.7274;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:65.71:530,66,0	0/1:8,1:9:9.61:10,0,113	0/0:13,0:8:14.37:0,14,124	0/1:9,0:7:2.73:3,0,50	0/0:32,0:32:75.10:0,75,774	0/1:14,3:19:1.48:1,0,356	0/0:9,0:9:21.05:0,21,224	0/0:32,1:32:35.97:0,36,576	1/1:1,4:5:8.99:74,9,0	1/1:1,12:13:32.94:270,33,0	1/1:4,21:25:27.21:407,27,0	1/1:6,5:11:14.97:123,15,0	1/1:1,5:7:17.02:129,17,0	0/0:4,0:4:9:0,9,86	0/0:8,0:10:20.88:0,21,199	1/1:1,8:10:17:129,17,0	0/0:28,0:28:72.65:0,73,768	0/0:12,0:13:32.18:0,32,358	0/0:20,0:20:21.23:0,21,385	0/0:21,1:22:32.46:0,32,537	0/0:3,0:4:11.86:0,12,110	0/1:2,6:8:14.01:105,0,14	1/1:1,4:5:11.98:99,12,0	0/1:1,3:4:12.52:40,0,13	0/1:3,5:9:4.71:22,0,5	0/0:10,0:12:26.88:0,27,257	0/0:25,0:25:54:0,54,548	0/0:11,0:11:30.08:0,30,320
chr10	74591991	.	C	CT	891.60	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.396;DP=504;FS=20.158;HRun=8;HaplotypeScore=46.6482;InbreedingCoeff=0.8250;MQ=68.83;MQ0=1;MQRankSum=1.539;QD=19.38;ReadPosRankSum=-4.037;VQSLOD=1.2817;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.16:0,96,960	0/0:5,0:5:15.03:0,15,153	0/0:22,0:14:4.55:0,5,148	0/0:11,0:8:2.24:0,2,83	0/0:19,0:19:48.09:0,48,483	0/0:22,0:22:63.14:0,63,643	0/0:14,0:14:36.06:0,36,360	1/1:8,21:24:61.70:737,62,0	0/0:13,0:13:36.08:0,36,367	0/0:22,0:22:66.14:0,66,669	0/0:13,0:13:38.96:0,39,382	0/0:12,0:12:30.06:0,30,306	0/0:10,0:10:30.06:0,30,302	0/0:17,0:17:51.12:0,51,520	0/0:23,0:23:63.14:0,63,642	0/0:24,0:24:72.16:0,72,734	0/0:27,0:27:81.17:0,81,818	1/1:6,11:17:23.75:275,24,0	0/0:16,0:16:30.05:0,30,299	0/0:24,0:24:69.12:0,69,691	0/0:5,0:5:12.03:0,12,122	0/0:18,0:18:48.11:0,48,489	0/0:15,0:15:39.09:0,39,397	0/0:14,0:14:42.10:0,42,428	0/0:24,0:24:66.14:0,66,672	0/0:18,0:18:45.10:0,45,458	0/0:29,0:29:75.14:0,75,756	0/0:5,0:5:15.03:0,15,153
chr10	74592347	.	CAGG	C	85.23	PASS	AB=0.972;AC=12;AF=0.353;AN=34;BaseQRankSum=1.310;DP=333;FS=9.381;HRun=0;HaplotypeScore=55.7804;InbreedingCoeff=0.0754;MQ=59.17;MQ0=10;MQRankSum=0.121;QD=0.60;ReadPosRankSum=-0.288;VQSLOD=0.1526;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:2.84:0,3,14	./.	./.	./.	0/0:19,0:16:9:0,9,108	0/0:15,0:15:0.02:0,0,130	0/0:32,0:31:22.28:0,22,294	0/0:11,0:11:5.78:0,6,31	./.	1/1:12,0:11:2.80:13,3,0	0/1:10,0:9:0:0,0,0	1/1:7,0:7:2.98:21,3,0	./.	0/1:15,1:15:12.86:13,0,292	0/1:15,0:15:15.74:16,0,315	./.	0/1:28,2:29:28.67:29,0,632	./.	1/1:13,0:10:8.99:88,9,0	./.	0/0:21,0:18:33.03:0,33,468	./.	./.	./.	0/0:10,0:8:0:0,0,0	0/1:18,0:17:2.48:2,0,121	0/1:20,1:21:12.84:13,0,286	0/0:6,0:6:2.99:0,3,24
chr10	74592399	.	CGATGAT	C	4058.77	PASS	AB=0.975;AC=24;AF=0.429;AN=56;BaseQRankSum=11.505;DP=400;FS=3.887;HRun=0;HaplotypeScore=112.7933;InbreedingCoeff=0.7695;MQ=60.87;MQ0=4;MQRankSum=-11.078;QD=28.99;ReadPosRankSum=-0.527;VQSLOD=2.9981;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,8:11:21.07:448,21,0	0/0:4,0:4:12.04:0,12,409	0/1:36,0:19:11.81:12,0,678	0/0:28,0:20:5.92:0,6,488	0/0:23,0:23:63.20:0,63,1981	0/0:14,0:14:39.12:0,39,1234	0/0:21,0:21:51.18:0,51,1670	0/0:4,0:12:24.32:0,24,145	1/1:1,3:4:9.03:197,9,0	1/1:2,11:13:33.11:721,33,0	1/1:1,4:4:6.02:132,6,0	1/1:1,8:8:24.08:510,24,0	1/1:1,2:3:9.03:174,9,0	0/0:22,0:22:60.20:0,60,1852	0/0:20,0:20:53.63:0,54,1583	1/1:1,8:9:24.08:497,24,0	0/0:35,0:35:90.31:0,90,2993	0/0:0,0:7:5.71:0,6,32	0/0:19,0:19:45.15:0,45,1414	0/0:16,0:16:42.13:0,42,1321	0/0:21,0:21:45.15:0,45,1418	1/1:1,5:5:6.02:124,6,0	1/1:1,7:8:21.07:442,21,0	1/1:6,3:9:12.04:264,12,0	1/1:1,7:8:24.08:523,24,0	0/1:18,1:19:14.85:15,0,1549	0/0:14,0:14:36.12:0,36,1166	0/0:4,0:4:12.04:0,12,408
chr10	74592401	.	AT	A	423.86	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=11.663;DP=397;FS=1.081;HRun=1;HaplotypeScore=90.5789;InbreedingCoeff=0.8478;MQ=61.62;MQ0=1;MQRankSum=-10.147;QD=4.93;ReadPosRankSum=0.645;VQSLOD=0.3409;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:9.04:38,9,0	0/0:4,0:4:12.04:0,12,192	0/0:31,0:19:30.73:0,31,602	0/0:27,0:20:53.85:0,54,688	0/0:23,0:23:66.22:0,66,1045	0/0:14,0:14:42.14:0,42,661	0/0:21,0:21:57.19:0,57,899	0/0:12,0:12:9.50:0,10,129	1/1:4,0:4:7.02:31,7,0	1/1:13,0:13:2.59:42,3,0	1/1:5,0:4:3.37:9,3,0	1/1:9,0:8:17.90:101,18,0	1/1:4,0:4:7.47:36,7,0	0/0:23,0:23:69.19:0,69,1033	0/0:21,0:21:53.60:0,54,855	1/1:9,0:9:17.79:81,18,0	0/0:34,0:34:99:0,99,1545	0/0:7,0:7:0.47:0,0,1	0/0:21,0:21:63.21:0,63,965	0/0:16,0:16:48.16:0,48,751	0/0:20,0:20:57.19:0,57,879	1/1:6,0:5:5.96:50,6,0	1/1:7,1:8:16.98:103,17,0	1/1:6,3:9:8.79:57,9,0	1/1:7,1:8:17.73:78,18,0	0/0:18,0:18:49.19:0,49,806	0/0:14,0:14:42.14:0,42,655	0/0:4,0:4:12.04:0,12,192
chr10	74592434	.	GAGA	G	5602	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.090;DP=464;FS=23.173;HRun=0;HaplotypeScore=92.9591;InbreedingCoeff=0.9915;MQ=61.76;MQ0=2;MQRankSum=-10.414;QD=39.45;ReadPosRankSum=1.357;VQSLOD=3.5598;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:33.11:558,33,0	0/0:7,0:7:21.06:0,21,420	0/0:24,0:19:23.27:0,23,805	0/0:20,0:14:25.35:0,25,681	0/0:21,0:21:63.22:0,63,1421	0/0:21,0:21:63.21:0,63,1376	0/0:20,0:20:60.15:0,60,1177	0/0:16,0:15:48.07:0,48,915	1/1:0,8:8:21.07:357,21,0	1/1:1,17:17:48.11:759,48,0	1/1:1,8:9:21.02:297,21,0	1/1:0,12:12:32.85:560,33,0	1/1:0,10:10:24.08:390,24,0	0/0:19,0:19:57.19:0,57,1255	0/0:13,0:13:39.13:0,39,841	1/1:4,10:14:39.08:623,39,0	0/0:30,0:30:87.07:0,87,1853	0/0:10,0:10:15.05:0,15,327	0/0:18,0:18:46.03:0,46,923	0/0:28,0:28:84.24:0,84,1718	0/0:22,0:22:63.05:0,63,1339	1/1:1,6:6:15.05:255,15,0	1/1:0,17:16:39.13:630,39,0	1/1:2,12:14:35.90:542,36,0	1/1:2,15:17:39.08:631,39,0	0/0:27,1:28:32.88:0,33,1635	0/0:18,0:17:54.15:0,54,1038	0/0:6,0:6:18.06:0,18,415
chr10	74594914	.	C	CCT	1689.52	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.699;DP=580;FS=7.946;HRun=0;HaplotypeScore=75.7868;InbreedingCoeff=0.9928;MQ=85.54;MQ0=0;MQRankSum=-1.463;QD=39.29;ReadPosRankSum=1.109;VQSLOD=5.1237;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,37:43:99:1784,105,0	0/0:10,0:10:27.05:0,27,332	0/0:24,0:24:42.11:0,42,525	0/0:24,0:24:44.62:0,45,537	0/0:16,0:16:42.12:0,42,532	0/0:19,0:19:51.17:0,51,663	0/0:22,0:22:54.18:0,54,702	0/0:23,0:23:42.13:0,42,534	0/0:20,0:20:51.17:0,51,663	0/0:18,0:18:48.16:0,48,624	0/0:13,0:13:27.08:0,27,338	0/0:18,0:18:51.15:0,51,649	0/0:18,0:18:48.15:0,48,605	0/0:19,0:19:51.13:0,51,645	0/0:18,0:18:51.17:0,51,663	0/0:27,0:27:75.24:0,75,974	0/0:31,0:31:78.21:0,78,995	0/0:22,0:22:54.17:0,54,702	0/0:18,0:18:42.10:0,42,515	0/0:11,0:11:30.04:0,30,357	0/0:27,0:27:66.20:0,66,843	0/0:22,0:22:57.17:0,57,727	0/0:16,0:15:33.11:0,33,429	0/0:37,0:37:90.29:0,90,1170	0/0:15,0:15:33.05:0,33,397	0/0:22,0:22:57.19:0,57,741	0/0:20,0:20:51.17:0,51,663	0/0:7,0:7:21.07:0,21,273
chr10	74595042	.	CGTGTGCGTGTGT	C	3001.52	PASS	AB=0.995;AC=17;AF=0.304;AN=56;BaseQRankSum=-0.024;DP=624;FS=3.197;HRun=0;HaplotypeScore=205.8435;InbreedingCoeff=0.5041;MQ=57.58;MQ0=6;MQRankSum=0.095;QD=11.12;ReadPosRankSum=0.283;VQSLOD=2.3003;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:37:99:188,0,534	0/0:6,0:6:18.05:0,18,547	0/0:28,0:16:26.33:0,26,236	0/0:19,0:11:26.92:0,27,245	0/0:23,0:23:62.93:0,63,1414	0/0:24,0:24:60.04:0,60,1712	0/0:16,0:16:39.27:0,39,736	0/0:18,0:18:42.91:0,43,395	1/1:3,17:21:17.85:504,18,0	0/1:30,0:30:99:108,0,1255	0/1:27,0:27:99:217,0,1165	1/1:20,5:26:54.03:857,54,0	1/1:18,2:20:43.67:566,44,0	0/0:22,0:22:50.45:0,50,1528	0/0:15,0:15:42.01:0,42,1154	0/1:17,0:17:99:168,0,297	0/0:37,0:37:99:0,102,3492	0/0:20,0:20:45.15:0,45,1606	0/0:12,0:12:24.01:0,24,585	0/0:18,0:18:36.05:0,36,912	0/0:41,0:38:97.97:0,98,2696	1/1:2,16:19:5.54:92,6,0	1/1:2,16:19:6.02:201,6,0	1/1:4,28:33:6.02:192,6,0	0/1:21,0:21:93.66:94,0,1296	0/0:35,0:35:86.06:0,86,2220	0/0:16,0:16:40.68:0,41,1067	0/0:4,0:4:8.96:0,9,319
chr10	74595046	.	TGC	T	2838.23	PASS	AB=0.990;AC=25;AF=0.446;AN=56;BaseQRankSum=3.026;DP=620;FS=16.647;HRun=0;HaplotypeScore=105.0381;InbreedingCoeff=0.4764;MQ=56.29;MQ0=7;MQRankSum=-0.267;QD=8.16;ReadPosRankSum=1.803;VQSLOD=2.3648;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:37:99:343,0,171	0/0:6,0:6:2.63:0,3,182	0/0:24,0:13:28.30:0,28,242	0/0:19,0:11:26.92:0,27,245	0/1:23,0:23:5.18:5,0,411	0/0:23,0:23:59.95:0,60,692	0/0:17,0:16:30.57:0,31,320	0/0:18,0:18:21.92:0,22,240	1/1:22,0:22:11.90:83,12,0	1/1:29,2:31:44.05:586,44,0	0/1:25,2:27:6.20:434,0,6	1/1:25,0:25:27.31:334,27,0	1/1:18,1:19:37.68:322,38,0	0/0:21,0:21:47.87:0,48,401	0/0:15,0:15:30.82:0,31,386	1/1:15,1:16:16.51:275,17,0	0/0:38,0:38:72.90:0,73,1137	0/1:21,0:21:70.01:70,0,114	0/1:14,0:14:11.07:11,0,135	0/1:17,0:17:14.22:14,0,272	0/0:42,0:39:86.26:0,86,947	1/1:18,0:18:5.87:35,6,0	1/1:19,0:19:6.42:42,6,0	1/1:30,0:30:5.92:38,6,0	1/1:23,2:25:9.11:440,9,0	0/0:33,0:33:57.37:0,57,799	0/0:16,0:16:38.21:0,38,406	0/1:4,0:4:1.07:1,0,68
chr10	74595048	.	CGT	C	655.42	PASS	AB=0.952;AC=24;AF=0.462;AN=52;BaseQRankSum=4.490;DP=619;FS=16.293;HRun=0;HaplotypeScore=114.1621;InbreedingCoeff=-0.1929;MQ=55.70;MQ0=7;MQRankSum=-0.823;QD=1.47;ReadPosRankSum=1.763;VQSLOD=1.1702;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,1:37:28.58:29,0,268	0/1:5,1:6:15:15,0,195	./.	./.	0/1:19,3:22:71.61:114,0,72	0/0:23,0:23:21.07:0,21,306	0/0:17,0:16:12.47:0,12,157	0/1:20,0:20:0.87:1,0,11	1/1:22,0:22:16.78:77,17,0	0/1:31,0:31:35.03:35,0,141	0/1:27,0:27:23.33:23,0,157	0/1:25,0:25:22.61:23,0,38	0/1:19,0:19:11.75:19,0,12	0/0:22,0:22:12.03:0,12,148	0/0:15,0:15:9.03:0,9,135	0/1:16,0:16:14.83:15,0,38	0/1:40,1:41:0.49:0,0,653	1/1:9,11:20:2.82:240,3,0	0/1:13,1:14:43.88:44,0,87	0/1:15,2:17:50.95:51,0,107	0/0:44,0:41:38.86:0,39,493	0/1:18,0:18:0:0,0,0	1/1:17,0:18:6.15:28,6,0	1/1:32,0:32:5.70:21,6,0	0/1:26,0:26:20.35:20,0,159	0/1:27,3:30:26.53:27,0,440	0/0:17,0:17:23.07:0,23,283	0/1:3,1:4:27.05:27,0,39
chr10	74595404	.	G	GCATA	9217.52	PASS	AB=0.667;AC=11;AF=0.196;AN=56;BaseQRankSum=-1.151;DP=1099;FS=9.781;HRun=0;HaplotypeScore=216.2518;InbreedingCoeff=0.8458;MQ=62.49;MQ0=3;MQRankSum=5.221;QD=35.59;ReadPosRankSum=1.270;VQSLOD=3.7087;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:62.27:0,62,911	0/0:17,0:17:30.06:0,30,439	0/0:24,0:20:17.08:0,17,287	0/0:21,0:18:13.29:0,13,113	0/0:36,0:36:83.82:0,84,1274	0/0:31,0:31:72.16:0,72,1055	0/0:25,0:25:51.07:0,51,663	0/0:64,0:64:99:0,107,1697	1/1:11,44:56:69.24:1670,69,0	0/0:65,0:65:99:0,154,2489	0/0:23,0:23:51.17:0,51,837	1/1:10,43:54:28.21:1775,28,0	1/1:35,20:55:71.08:2468,71,0	0/0:36,0:36:84.26:0,84,1324	0/0:60,0:60:99:0,132,1938	0/0:66,0:66:99:0,147,2338	0/0:30,0:30:26.57:0,27,789	0/0:33,0:33:53.92:0,54,930	0/0:21,0:19:27.06:0,27,373	0/0:32,0:31:54.14:0,54,852	0/0:73,0:72:99:0,186,2919	1/1:9,28:38:4.19:1196,4,0	1/1:5,33:38:50.92:1245,51,0	0/1:9,9:18:24.15:864,0,24	0/0:27,0:27:45.08:0,45,713	0/0:55,0:54:99:0,129,2029	0/0:44,0:44:99:0,120,1708	0/0:15,0:15:29.97:0,30,354
chr10	74595484	.	GCATA	G	10964.02	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=18.933;DP=1147;FS=5.254;HRun=0;HaplotypeScore=238.6668;InbreedingCoeff=0.9983;MQ=54.16;MQ0=21;MQRankSum=6.029;QD=25.68;ReadPosRankSum=6.301;VQSLOD=3.6251;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,31:40:38.55:646,39,0	0/0:17,0:17:27.09:0,27,619	0/0:51,0:24:47.85:0,48,812	0/0:40,0:14:26.98:0,27,536	0/0:38,0:38:69.22:0,69,1599	0/0:41,0:40:99:0,111,2525	0/0:24,0:24:54.17:0,54,1208	0/0:69,0:65:99:0,135,2703	1/1:23,20:43:93.05:1508,93,0	1/1:11,39:50:99:1608,108,0	1/1:3,19:22:29.86:474,30,0	1/1:31,20:51:99:1675,111,0	1/1:9,47:56:65.77:1106,66,0	0/0:41,0:41:99:0,102,2238	0/0:65,0:65:99:0,170,3697	1/1:10,58:68:99:1722,102,0	0/0:33,0:33:75.11:0,75,1591	0/0:43,0:43:99:0,117,2320	0/0:28,0:24:57.17:0,57,1166	0/0:38,0:36:66.23:0,66,1514	0/0:83,0:80:99:0,178,3903	1/1:11,9:20:29.64:484,30,0	1/1:15,9:24:36.11:600,36,0	1/1:4,24:28:51.17:870,51,0	1/1:8,16:24:17.98:271,18,0	0/0:49,1:49:48.98:0,49,2610	0/0:41,0:41:78.20:0,78,1680	0/0:17,0:17:39.11:0,39,800
chr10	74595977	.	AG	A	3179.83	PASS	AB=0.955;AC=23;AF=0.411;AN=56;BaseQRankSum=5.789;DP=472;FS=5.762;HRun=3;HaplotypeScore=68.8789;InbreedingCoeff=0.9148;MQ=72.57;MQ0=5;MQRankSum=-1.359;QD=15.90;ReadPosRankSum=1.743;VQSLOD=3.2517;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:31:60.86:545,61,0	0/0:7,0:7:14.08:0,14,176	0/1:20,1:14:4.88:5,0,201	0/0:20,0:14:3.74:0,4,161	0/0:14,0:15:44.05:0,44,428	0/0:16,0:16:38.99:0,39,417	0/0:21,0:21:45.29:0,45,438	0/0:31,0:30:80.12:0,80,755	1/1:16,0:16:35.91:293,36,0	1/1:14,10:24:55.83:585,56,0	1/1:5,11:16:35.69:326,36,0	1/1:10,0:10:20.87:165,21,0	1/1:17,0:16:40.17:297,40,0	0/0:16,0:16:38.72:0,39,408	0/0:15,0:15:43.90:0,44,446	1/1:8,6:14:37.35:359,37,0	0/0:26,0:25:59.40:0,59,639	0/0:20,0:19:48.20:0,48,545	0/0:12,0:11:29.57:0,30,257	0/0:14,0:14:34.09:0,34,335	0/0:9,0:9:19.56:0,20,198	1/1:12,0:12:23.82:189,24,0	1/1:16,0:15:32.84:271,33,0	1/1:14,0:14:21.02:194,21,0	1/1:6,2:8:18.48:173,18,0	0/0:11,0:10:18.06:0,18,242	0/0:27,0:27:61.45:0,61,755	0/0:12,0:12:26.04:0,26,310
chr10	74595979	.	GGTT	G	3825.86	PASS	AB=0.951;AC=20;AF=0.357;AN=56;BaseQRankSum=0.924;DP=478;FS=13.105;HRun=0;HaplotypeScore=81.2791;InbreedingCoeff=0.6741;MQ=70.93;MQ0=6;MQRankSum=-0.598;QD=18.85;ReadPosRankSum=1.715;VQSLOD=2.6473;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:63.85:1032,64,0	0/0:7,0:7:21.07:0,21,404	0/1:21,0:14:3.95:4,0,281	0/0:18,0:13:1.47:0,1,227	0/0:17,0:17:48.10:0,48,778	0/0:16,0:16:45.06:0,45,762	0/0:21,0:21:53.38:0,53,719	0/0:33,0:32:90.10:0,90,1281	1/1:6,7:14:36.49:480,36,0	0/1:22,0:24:67.96:193,0,68	1/1:13,2:16:9.59:173,10,0	1/1:0,11:11:21.07:334,21,0	1/1:8,7:16:12.98:437,13,0	0/0:14,0:14:42:0,42,689	0/0:16,0:16:48.01:0,48,821	0/1:13,0:15:71.68:78,0,72	0/0:25,0:24:66.03:0,66,1131	0/0:20,0:19:51.12:0,51,985	0/0:12,0:11:29.96:0,30,333	0/0:14,0:14:39.07:0,39,607	0/0:8,0:8:21.05:0,21,382	1/1:0,11:13:23.78:281,24,0	1/1:0,14:16:32.91:470,33,0	1/1:0,12:13:21.03:336,21,0	0/1:8,0:8:7.76:8,0,80	0/0:11,0:10:23.75:0,24,467	0/0:28,0:28:84.21:0,84,1472	0/0:14,0:13:36.12:0,36,692
chr10	74597282	.	T	TTTGTTTGGTTGG	21426.07	PASS	AB=0.943;AC=27;AF=0.482;AN=56;BaseQRankSum=-8.783;DP=742;FS=4.255;HRun=0;HaplotypeScore=213.3029;InbreedingCoeff=0.8994;MQ=60.92;MQ0=0;MQRankSum=-15.207;QD=56.38;ReadPosRankSum=0.242;VQSLOD=4.5030;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,13:20:24.08:1290,24,0	0/0:10,0:10:24.07:0,24,665	0/0:34,0:32:50.45:0,50,1239	0/0:33,0:31:35.86:0,36,1528	0/0:24,0:24:57.17:0,57,1744	0/0:25,0:25:66.21:0,66,2027	0/0:19,0:19:48.16:0,48,1532	1/1:36,0:36:72.19:2179,72,0	1/1:6,14:23:30.10:1446,30,0	1/1:9,23:40:84.22:3677,84,0	1/1:5,13:22:21.07:1111,21,0	1/1:9,19:29:51.17:2678,51,0	1/1:3,15:22:33.07:1696,33,0	0/0:26,0:26:63.16:0,63,1707	0/0:32,0:32:81.27:0,81,2657	1/1:9,23:40:51.13:2482,51,0	0/0:28,0:28:72.24:0,72,2174	1/1:5,6:10:4.48:326,4,0	0/0:25,0:25:67.45:0,67,1694	0/0:32,0:32:75.25:0,75,2464	0/0:33,0:33:84.25:0,84,2277	1/1:4,25:39:30.10:1783,30,0	1/1:3,16:26:11.86:658,12,0	1/1:4,4:9:12.04:646,12,0	1/1:6,15:25:24.08:1181,24,0	0/1:31,1:33:99:273,0,2268	0/0:28,0:28:75.24:0,75,2337	0/0:13,0:13:36.09:0,36,1070
chr10	74597352	.	T	TGGCCC	13717.66	PASS	AB=0.667;AC=25;AF=0.446;AN=56;BaseQRankSum=17.944;DP=574;FS=3.344;HRun=0;HaplotypeScore=138.6879;InbreedingCoeff=0.9601;MQ=77.09;MQ0=0;MQRankSum=-18.339;QD=70.35;ReadPosRankSum=4.423;VQSLOD=6.4348;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:20:45.15:1149,45,0	0/0:12,0:12:36.11:0,36,795	0/0:22,0:22:60.21:0,60,1387	0/0:43,0:41:99:0,111,2473	0/0:24,0:24:72.25:0,72,1678	0/0:18,0:18:54.18:0,54,1200	0/0:20,0:20:60.19:0,60,1354	1/1:2,9:12:33.11:865,33,0	1/1:2,18:19:54.14:1383,54,0	1/1:1,25:26:78.23:2014,78,0	1/1:0,8:8:24.08:630,24,0	1/1:3,14:18:51.17:1296,51,0	1/1:0,7:7:21.07:561,21,0	0/0:23,0:23:69.21:0,69,1477	0/0:35,0:35:99:0,105,2382	1/1:1,24:25:75.20:1958,75,0	0/0:36,0:35:99:0,108,2495	1/1:2,2:4:6.02:168,6,0	0/0:24,0:24:69.24:0,69,1608	0/0:23,0:23:69.21:0,69,1518	0/0:26,0:26:72.25:0,72,1675	1/1:0,10:12:36.12:901,36,0	1/1:2,17:20:54.66:1429,55,0	0/1:2,2:4:0:0,0,0	1/1:0,18:18:51.18:1363,51,0	0/0:28,0:28:78.27:0,78,1799	0/0:35,0:35:99:0,105,2398	0/0:10,0:10:30.10:0,30,699
chr10	74597353	.	T	TGG	8631.21	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=19.563;DP=605;FS=5.239;HRun=0;HaplotypeScore=143.4648;InbreedingCoeff=0.9806;MQ=75.25;MQ0=0;MQRankSum=-19.256;QD=37.36;ReadPosRankSum=1.653;VQSLOD=6.4501;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,17:24:62.80:759,63,0	0/0:11,0:11:33.11:0,33,538	0/0:22,0:22:66.19:0,66,1011	0/0:42,0:40:99:0,114,1784	0/0:24,0:24:72.25:0,72,1175	0/0:18,0:18:54.13:0,54,851	0/0:19,0:19:57.19:0,57,930	1/1:8,10:18:54.13:748,54,0	1/1:5,18:22:66.22:914,66,0	1/1:4,25:29:84.26:1137,84,0	1/1:3,8:11:30.09:387,30,0	1/1:5,15:21:60.19:856,60,0	1/1:4,7:11:30.10:428,30,0	0/0:24,0:24:66.23:0,66,1072	0/0:35,0:35:99:0,102,1664	1/1:3,24:26:78.25:1076,78,0	0/0:36,0:35:99:0,108,1762	1/1:4,2:6:12.04:174,12,0	0/0:24,0:24:72.24:0,72,1153	0/0:21,0:21:63.22:0,63,1028	0/0:26,0:26:75.24:0,75,1196	1/1:2,11:14:42.13:543,42,0	1/1:4,18:22:57.19:784,57,0	1/1:3,2:5:5.84:36,6,0	1/1:2,18:20:57.19:789,57,0	0/0:28,0:28:81.26:0,81,1297	0/0:34,0:34:99:0,102,1661	0/0:10,0:10:30.10:0,30,489
chr10	74598256	.	GTTGT	G	1129.24	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.078;DP=733;FS=0.000;HRun=0;HaplotypeScore=128.6330;InbreedingCoeff=0.9565;MQ=65.90;MQ0=0;MQRankSum=-4.456;QD=28.23;ReadPosRankSum=-2.922;VQSLOD=2.5639;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:96.77:0,97,2196	0/0:9,0:9:21.07:0,21,507	0/0:40,0:34:33.07:0,33,720	0/0:26,0:23:8.12:0,8,536	0/0:31,0:31:75.24:0,75,1714	0/0:29,1:30:23.71:0,24,1469	0/0:19,0:19:51.13:0,51,1134	1/1:7,19:26:57.14:863,57,0	0/0:18,0:18:33.11:0,33,772	0/0:24,0:24:48.16:0,48,1110	0/0:16,0:16:30.10:0,30,680	0/0:34,0:34:57.17:0,57,1240	0/0:28,0:28:63.22:0,63,1517	0/0:30,0:30:51.17:0,51,1185	0/0:41,1:42:56.86:0,57,2320	0/0:27,0:26:63.20:0,63,1400	0/0:41,0:41:99:0,99,2318	1/1:5,9:14:24.08:388,24,0	0/0:21,0:20:36.12:0,36,849	0/0:27,0:27:51.12:0,51,1133	0/0:36,0:36:66.21:0,66,1542	0/0:19,0:19:42.14:0,42,1013	0/0:18,0:18:39.13:0,39,942	0/0:36,0:36:81.28:0,81,1953	0/0:22,0:22:48.16:0,48,1108	0/0:22,0:22:45.15:0,45,1076	0/0:22,0:22:36.12:0,36,845	0/0:10,0:10:18.06:0,18,435
chr10	74598685	.	T	TACAC	1948.86	PASS	AB=1.000;AC=26;AF=0.481;AN=54;BaseQRankSum=6.917;DP=655;FS=12.478;HRun=0;HaplotypeScore=166.3304;InbreedingCoeff=0.5656;MQ=65.97;MQ0=6;MQRankSum=-4.356;QD=5.43;ReadPosRankSum=-3.553;VQSLOD=0.4489;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:38:6.02:96,6,0	0/0:12,0:12:12.04:0,12,174	0/0:42,0:36:3.01:0,3,44	0/0:31,0:21:1.99:0,2,9	0/0:21,0:21:17.93:0,18,272	0/0:17,0:17:18.04:0,18,238	0/0:32,0:32:20.62:0,21,321	1/1:37,0:35:46.95:571,47,0	1/1:19,0:18:5.96:83,6,0	1/1:12,0:10:10.84:118,11,0	0/1:14,0:14:8.48:44,0,8	1/1:25,3:27:9.92:190,10,0	1/1:17,0:16:8.95:80,9,0	0/0:17,0:21:24.06:0,24,347	0/0:30,0:30:38.98:0,39,543	1/1:35,0:34:6.77:397,7,0	0/1:19,0:19:2.69:3,0,359	1/1:15,0:15:18.06:291,18,0	0/1:17,0:17:8.93:9,0,191	0/0:20,0:20:30.10:0,30,435	0/1:31,0:31:25.72:26,0,495	1/1:18,0:16:3.01:34,3,0	./.	1/1:34,2:33:9.03:142,9,0	1/1:21,0:20:4.83:55,5,0	0/0:22,0:22:30.47:0,30,420	0/0:19,0:19:38.44:0,38,543	0/0:7,0:7:12.04:0,12,177
chr10	74598719	.	CAGAGAGAGAGAG	C	666.40	PASS	AB=0.805;AC=7;AF=0.125;AN=56;BaseQRankSum=5.377;DP=668;FS=0.000;HRun=0;HaplotypeScore=226.2061;InbreedingCoeff=0.1724;MQ=43.80;MQ0=17;MQRankSum=-5.597;QD=5.09;ReadPosRankSum=-2.596;VQSLOD=2.0868;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:36.07:0,36,800	0/0:9,0:9:18.06:0,18,999	0/0:26,0:8:18.02:0,18,630	0/0:30,0:6:11.71:0,12,384	0/0:26,0:26:47.90:0,48,2011	0/0:24,0:23:51.18:0,51,2642	0/0:29,0:28:48.16:0,48,2122	0/0:41,0:39:57.19:0,57,2393	0/0:11,1:12:3.01:0,3,43	0/1:7,7:14:55.54:401,0,56	0/0:10,2:13:7.41:0,7,122	0/1:21,7:28:99:122,0,133	0/1:14,4:18:91.39:168,0,91	0/0:20,0:20:32.80:0,33,1172	0/0:24,0:30:33.11:0,33,1592	0/1:35,3:36:81.22:81,0,245	0/0:23,0:22:41.51:0,42,1830	0/0:15,0:15:24.04:0,24,1060	0/0:24,0:24:48.15:0,48,1770	0/0:21,0:21:41.49:0,41,1497	0/0:48,0:47:81.75:0,82,3561	0/1:14,1:13:0:0,0,0	1/1:10,1:13:3.47:8,3,0	0/0:33,1:34:0.23:0,0,1	0/0:14,4:20:5.92:0,6,50	0/0:24,0:24:57.20:0,57,2295	0/0:25,0:25:47.89:0,48,1842	0/0:4,0:4:12.04:0,12,406
chr10	74599154	.	G	GCCATCTAACAC	3045.99	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.107;DP=664;FS=4.125;HRun=0;HaplotypeScore=220.9436;InbreedingCoeff=0.9757;MQ=78.82;MQ0=0;MQRankSum=-7.938;QD=89.59;ReadPosRankSum=-1.279;VQSLOD=3.3694;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,17:34:63.21:3141,63,0	0/0:6,0:6:15.02:0,15,450	0/0:17,0:17:36.10:0,36,981	0/0:16,0:16:40.38:0,40,1130	0/0:15,0:15:39.13:0,39,1338	0/0:32,0:32:84.47:0,84,3060	0/0:25,0:25:69.19:0,69,2184	0/0:27,0:27:78.25:0,78,2382	0/0:18,0:18:54.19:0,54,1783	0/0:29,0:29:75.23:0,75,2258	0/0:10,0:10:30.10:0,30,969	0/0:43,0:43:99:0,129,4315	0/0:26,0:26:69.20:0,69,2126	0/0:34,0:34:96.32:0,96,3236	0/0:28,0:28:84.27:0,84,2767	0/0:38,0:37:99:0,108,3569	0/0:24,0:24:72.19:0,72,2319	0/0:16,0:16:48.16:0,48,1657	0/0:21,0:21:60.14:0,60,1844	0/0:12,0:12:36.12:0,36,1143	0/0:68,0:68:99:0,196,6708	0/0:18,0:18:48.15:0,48,1504	0/0:12,0:12:36.11:0,36,1104	0/0:26,0:26:78.26:0,78,2552	0/0:16,0:16:42.10:0,42,1375	0/0:18,0:18:54.18:0,54,1663	0/0:29,0:29:84.29:0,84,2748	0/0:6,0:6:18.04:0,18,559
chr10	74599335	.	G	GA	2642.79	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-5.740;DP=607;FS=3.239;HRun=7;HaplotypeScore=58.8994;InbreedingCoeff=0.9467;MQ=71.48;MQ0=1;MQRankSum=1.430;QD=26.69;ReadPosRankSum=2.298;VQSLOD=4.5379;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.14:0,90,868	0/0:10,0:10:21.03:0,21,203	0/0:19,0:15:11.94:0,12,240	0/0:20,0:17:6.38:0,6,158	0/0:19,0:19:48.04:0,48,451	0/0:21,0:21:51.06:0,51,487	0/0:20,0:20:31.81:0,32,436	0/0:32,0:32:87.13:0,87,840	0/0:17,0:17:51.08:0,51,492	1/1:4,23:27:66.20:797,66,0	1/1:2,19:21:45.09:520,45,0	0/0:26,0:26:69.10:0,69,663	0/0:18,0:18:51.08:0,51,491	0/0:24,0:24:48.05:0,48,458	0/0:20,0:19:60.08:0,60,574	1/1:3,31:33:84.26:1015,84,0	0/0:32,0:32:90.11:0,90,861	0/0:18,0:18:54.09:0,54,521	0/0:23,0:23:60.09:0,60,579	0/0:17,0:17:45.07:0,45,434	0/0:17,0:17:39.06:0,39,376	0/0:15,0:15:33.04:0,33,313	0/0:21,0:21:45.07:0,45,434	0/0:33,0:33:93.13:0,93,891	1/1:1,16:17:39.12:471,39,0	0/0:29,2:31:11.63:0,12,675	0/0:19,0:19:54.09:0,54,521	0/0:4,0:4:12.02:0,12,116
chr10	74599582	.	G	GA	3792.55	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-9.688;DP=441;FS=6.151;HRun=8;HaplotypeScore=41.5344;InbreedingCoeff=0.9634;MQ=64.80;MQ0=2;MQRankSum=3.508;QD=25.12;ReadPosRankSum=4.142;VQSLOD=4.0335;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,33:37:47.71:788,48,0	0/0:3,0:3:9:0,9,82	0/0:10,0:2:6:0,6,55	0/0:20,0:13:17.49:0,17,160	0/0:16,0:16:48.03:0,48,439	0/0:16,0:16:45.01:0,45,406	0/0:16,0:16:35.63:0,36,329	0/0:27,0:25:72.03:0,72,655	1/1:3,6:9:15.04:173,15,0	1/1:5,8:13:27.08:311,27,0	1/1:1,6:7:18.05:208,18,0	1/1:5,7:12:27.08:305,27,0	1/1:3,5:8:15.04:173,15,0	0/0:14,0:14:39.02:0,39,357	0/0:15,0:15:36.01:0,36,329	1/1:2,13:15:33.10:381,33,0	0/0:29,0:30:74.06:0,74,665	0/0:22,0:21:44.99:0,45,406	0/0:28,0:27:81.04:0,81,741	0/0:8,0:8:21.01:0,21,192	0/0:12,0:12:27.01:0,27,247	1/1:3,4:7:15.04:173,15,0	1/1:1,12:13:33.10:381,33,0	1/1:0,6:6:15.04:173,15,0	1/1:1,23:24:63.19:727,63,0	0/0:24,0:24:69.03:0,69,628	0/0:21,0:21:48.02:0,48,439	0/0:8,0:8:21:0,21,192
chr10	74599870	.	G	GA	654.44	PASS	AB=0.908;AC=4;AF=0.071;AN=56;BaseQRankSum=-4.064;DP=609;FS=3.839;HRun=12;HaplotypeScore=72.5032;InbreedingCoeff=0.4023;MQ=74.27;MQ0=11;MQRankSum=-0.152;QD=8.84;ReadPosRankSum=1.059;VQSLOD=2.9637;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,37:51:30.09:746,30,0	0/0:7,0:7:8.93:0,9,66	0/0:52,0:20:41.60:0,42,266	0/0:35,0:17:2.41:0,2,137	0/0:15,1:16:8.77:0,9,224	0/0:22,0:23:52.59:0,53,364	0/0:11,0:11:18.77:0,19,205	0/0:29,1:29:16.33:0,16,353	0/0:19,0:19:36.61:0,37,263	0/0:18,1:20:17.39:0,17,274	0/0:17,0:17:40.65:0,41,288	0/0:17,0:19:33.83:0,34,230	0/0:11,0:13:24.94:0,25,165	0/0:23,0:23:53.36:0,53,381	0/0:23,0:24:64.17:0,64,451	0/0:14,1:15:3.52:0,4,184	0/0:28,0:29:73.28:0,73,514	0/0:21,0:24:57.73:0,58,405	0/0:14,0:15:33.66:0,34,227	0/0:14,0:14:26.81:0,27,195	0/0:12,1:16:9.72:0,10,207	0/1:6,1:7:8.30:8,0,109	0/0:8,0:8:23.85:0,24,173	0/0:22,0:25:58.81:0,59,391	0/0:19,0:22:54.75:0,55,381	0/0:26,0:26:59.01:0,59,422	0/0:26,0:28:40.39:0,40,367	0/1:15,1:16:0.14:0,0,198
chr10	74601613	.	CTGTGTGTGTGTG	C	5131.57	PASS	AB=0.692;AC=19;AF=0.352;AN=54;BaseQRankSum=11.542;DP=656;FS=24.614;HRun=0;HaplotypeScore=219.4185;InbreedingCoeff=0.8567;MQ=60.55;MQ0=6;MQRankSum=-9.739;QD=23.87;ReadPosRankSum=3.605;VQSLOD=2.6333;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:40:30.38:0,30,1407	0/0:14,0:15:33.09:0,33,1354	./.	0/0:26,0:16:6.02:0,6,100	0/0:15,0:16:12.04:0,12,529	0/0:20,0:22:27.08:0,27,1181	0/0:29,0:32:54.17:0,54,2526	0/0:23,0:24:37.30:0,37,1269	1/1:11,11:24:30.10:892,30,0	0/1:15,0:27:99:201,0,153	1/1:8,1:15:10.20:242,10,0	1/1:10,6:18:21.07:641,21,0	1/1:12,11:23:24.07:831,24,0	0/0:15,0:17:27.09:0,27,1370	0/0:22,0:24:36.12:0,36,1890	1/1:14,1:35:14.76:724,15,0	0/0:27,0:29:50.87:0,51,2348	0/0:18,0:20:33.11:0,33,1553	0/0:23,0:23:30.09:0,30,1318	0/0:17,0:17:20.53:0,21,991	0/0:45,0:43:48.77:0,49,2200	1/1:11,9:21:21.07:632,21,0	1/1:8,7:15:8.60:311,9,0	1/1:12,4:17:6.02:208,6,0	1/1:7,1:20:24.08:450,24,0	0/0:31,0:40:75.26:0,75,3741	0/0:20,0:20:27.09:0,27,1313	0/0:7,0:7:18.06:0,18,713
chr10	74602355	.	TAGCATGCTCA	T	2628.81	PASS	AB=0.750;AC=33;AF=0.917;AN=36;BaseQRankSum=1.557;DP=73;FS=7.896;HRun=0;HaplotypeScore=71.1806;InbreedingCoeff=0.1136;MQ=32.97;MQ0=9;MQRankSum=-0.222;QD=46.94;ReadPosRankSum=0.311;VQSLOD=2.4375;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:5,0:1:2.94:0,3,18	1/1:4,2:6:11.22:327,11,0	1/1:3,1:4:6.02:169,6,0	1/1:2,0:2:2.96:19,3,0	./.	./.	1/1:4,0:4:12.01:252,12,0	1/1:4,0:4:9.03:242,9,0	./.	./.	1/1:1,0:1:2.88:15,3,0	1/1:0,1:1:3.01:77,3,0	1/1:0,1:1:3.01:73,3,0	./.	0/1:2,1:3:90.14:90,0,137	1/1:3,0:2:2.92:17,3,0	1/1:5,2:7:15.05:412,15,0	./.	1/1:2,0:2:6.02:167,6,0	1/1:5,0:5:9:133,9,0	./.	1/1:5,1:6:17.94:369,18,0	1/1:5,0:5:11.97:271,12,0	1/1:1,0:1:2.22:7,2,0	1/1:1,0:1:3.01:84,3,0
chr10	74602357	.	GCAT	G	1324.67	PASS	AB=0.833;AC=32;AF=0.889;AN=36;BaseQRankSum=1.479;DP=64;FS=8.434;HRun=0;HaplotypeScore=74.5367;InbreedingCoeff=0.0381;MQ=29.29;MQ0=9;MQRankSum=0.933;QD=25.97;ReadPosRankSum=0.296;VQSLOD=2.5830;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:6,0:1:2.94:0,3,18	0/1:3,3:6:1.06:154,0,1	1/1:2,1:3:6.02:76,6,0	1/1:2,0:2:3.01:38,3,0	./.	./.	1/1:0,3:3:8.89:96,9,0	1/1:0,3:3:9.03:109,9,0	./.	./.	1/1:1,0:1:3.01:30,3,0	1/1:1,0:1:3.01:30,3,0	1/1:1,0:1:2.98:21,3,0	./.	0/1:3,0:3:38.15:38,0,65	1/1:2,0:1:3.01:38,3,0	1/1:3,4:7:15.04:179,15,0	./.	1/1:0,2:2:6.02:75,6,0	1/1:3,2:5:9:88,9,0	./.	1/1:3,3:6:18.06:226,18,0	1/1:1,3:4:12.04:164,12,0	1/1:1,0:1:2.96:19,3,0	1/1:0,1:1:3.01:38,3,0
chr10	74602362	.	CTCAAGGCCCTGAGTTTGG	C	4318.24	PASS	AB=1.000;AC=29;AF=0.967;AN=30;BaseQRankSum=1.636;DP=53;FS=10.669;HRun=0;HaplotypeScore=85.7666;InbreedingCoeff=-0.1357;MQ=26.00;MQ0=11;MQRankSum=-1.733;QD=107.96;ReadPosRankSum=-1.540;VQSLOD=3.5502;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:3,3:6:13.29:552,13,0	1/1:1,1:2:6.02:279,6,0	./.	./.	./.	1/1:1,3:3:9.03:404,9,0	1/1:0,3:3:9.03:416,9,0	./.	./.	1/1:1,0:1:2.88:15,3,0	1/1:1,0:1:3.01:132,3,0	1/1:1,0:1:3.01:120,3,0	./.	0/1:2,0:2:99:125,0,248	./.	1/1:2,4:6:18.04:710,18,0	./.	1/1:0,2:2:6.02:279,6,0	1/1:0,2:2:3.01:140,3,0	./.	1/1:1,3:4:12.04:559,12,0	1/1:1,3:4:9.03:425,9,0	1/1:1,0:1:2.98:22,3,0	1/1:0,1:1:3.01:140,3,0
chr10	74602370	.	CCTGAGTTTGGT	C	2897.95	PASS	AB=0.667;AC=25;AF=0.962;AN=26;BaseQRankSum=1.628;DP=49;FS=15.185;HRun=0;HaplotypeScore=97.6826;InbreedingCoeff=-0.1403;MQ=25.22;MQ0=9;MQRankSum=-1.733;QD=74.31;ReadPosRankSum=-0.368;VQSLOD=2.1218;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:3,2:5:12.04:374,12,0	1/1:1,1:2:6.02:196,6,0	./.	./.	./.	1/1:4,0:3:9.03:277,9,0	1/1:3,0:3:9.03:266,9,0	./.	./.	./.	1/1:0,1:1:3.01:95,3,0	1/1:0,1:1:3.01:108,3,0	./.	0/1:1,1:2:99:99,0,166	./.	1/1:4,2:6:18.03:516,18,0	./.	1/1:2,0:2:6.02:195,6,0	1/1:2,0:2:3.01:93,3,0	./.	1/1:3,1:4:12.04:387,12,0	1/1:4,0:4:9.03:275,9,0	./.	1/1:3,0:1:3.01:100,3,0
chr10	74602389	.	TCCG	T	812.16	PASS	AB=0.905;AC=29;AF=0.690;AN=42;BaseQRankSum=-2.306;DP=84;FS=5.441;HRun=0;HaplotypeScore=67.8605;InbreedingCoeff=0.1660;MQ=25.43;MQ0=12;MQRankSum=0.265;QD=12.89;ReadPosRankSum=-1.802;VQSLOD=2.0906;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:1:0.47:1,0,0	./.	./.	0/0:5,0:1:0:0,0,0	1/1:5,0:5:12.01:144,12,0	1/1:5,0:5:11.83:134,12,0	./.	1/1:2,0:2:3.01:35,3,0	./.	0/1:4,1:4:2.76:16,0,3	0/1:5,0:5:1.34:1,0,27	0/1:1,0:1:0:0,0,0	./.	0/1:1,0:1:0:0,0,0	1/1:1,0:1:3.01:45,3,0	1/1:1,2:3:6.02:81,6,0	1/1:1,0:1:2.90:16,3,0	0/1:2,0:3:42.15:69,0,42	./.	1/1:6,0:7:5.09:151,5,0	./.	1/1:3,0:3:1.31:23,1,0	0/0:4,0:4:3.17:0,3,14	0/0:2,0:2:1.50:0,2,4	0/1:7,0:7:17.40:17,0,19	1/1:5,0:5:12.04:160,12,0	0/1:2,1:1:0:0,0,0	1/1:5,0:1:2.99:23,3,0
chr10	74602390	.	CCGA	C	1199.49	PASS	AB=0.844;AC=28;AF=0.667;AN=42;BaseQRankSum=2.466;DP=88;FS=8.177;HRun=0;HaplotypeScore=66.5096;InbreedingCoeff=0.1331;MQ=25.14;MQ0=12;MQRankSum=0.813;QD=19.66;ReadPosRankSum=2.672;VQSLOD=2.7199;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:1,0:1:0:0,0,0	./.	0/0:5,0:1:0:0,0,0	0/0:6,0:1:0:0,0,0	1/1:2,3:6:11.97:202,12,0	1/1:0,4:5:11.88:190,12,0	./.	1/1:0,2:2:3.01:55,3,0	./.	1/1:5,0:4:7.33:30,7,0	1/1:4,0:5:0.46:40,0,0	./.	./.	0/0:0,0:1:0:0,0,0	1/1:0,1:1:3.01:54,3,0	1/1:2,0:3:5.70:87,6,0	1/1:0,0:1:3:25,3,0	0/1:2,0:3:24.75:64,0,25	./.	1/1:2,3:7:16.28:240,16,0	./.	0/1:2,0:3:7.20:36,0,7	0/0:2,0:4:1.04:0,1,10	1/1:2,0:2:0.88:2,1,0	0/1:6,0:7:14.74:33,0,15	1/1:1,2:5:12.04:197,12,0	0/0:3,0:1:0:0,0,0	1/1:4,0:1:3.01:42,3,0
chr10	74602411	.	GA	G	3729.05	PASS	AB=0.635;AC=43;AF=0.796;AN=54;BaseQRankSum=-5.221;DP=289;FS=0.000;HRun=18;HaplotypeScore=81.4009;InbreedingCoeff=0.0859;MQ=33.48;MQ0=12;MQRankSum=0.924;QD=15.47;ReadPosRankSum=0.726;VQSLOD=3.0737;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,1:3:2.77:27,3,0	0/0:1,0:1:0.47:0,0,1	0/0:29,0:6:1.30:0,1,55	0/0:17,0:3:0.02:0,0,18	1/1:3,19:21:19.72:291,20,0	0/1:3,7:10:5.43:177,0,5	0/1:2,3:4:10.27:49,0,10	0/1:6,5:11:27.67:68,0,28	1/1:4,7:10:15:217,15,0	1/1:3,9:12:16.15:272,16,0	1/1:3,10:12:24.33:210,24,0	1/1:5,3:7:11.18:72,11,0	1/1:0,3:3:9.01:85,9,0	1/1:1,6:7:18.02:170,18,0	1/1:1,6:7:18.03:173,18,0	1/1:3,6:9:2.37:103,2,0	1/1:1,5:6:9.01:87,9,0	1/1:1,5:5:12.02:117,12,0	0/1:7,7:11:14.70:174,0,15	1/1:4,14:18:29.97:348,30,0	1/1:0,1:1:3:29,3,0	1/1:4,4:8:11.33:91,11,0	1/1:6,2:7:10.56:74,11,0	1/1:3,2:5:3.85:31,4,0	0/1:7,13:20:21.92:300,0,22	1/1:5,14:18:24.24:363,24,0	1/1:7,8:12:15.63:201,16,0	./.
chr10	74602416	.	A	AG	277.87	PASS	AB=0.837;AC=12;AF=0.222;AN=54;BaseQRankSum=4.724;DP=278;FS=0.000;HRun=0;HaplotypeScore=91.3083;InbreedingCoeff=-0.1036;MQ=33.72;MQ0=11;MQRankSum=0.620;QD=2.70;ReadPosRankSum=1.652;VQSLOD=2.8143;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:2.22:0,2,7	1/1:0,1:1:3:28,3,0	0/0:30,0:7:14.60:0,15,132	0/0:17,0:3:7.12:0,7,40	0/0:20,1:20:11.43:0,11,102	0/1:8,1:9:6.85:7,0,94	0/0:5,0:4:8.68:0,9,47	0/1:7,4:11:36.46:132,0,36	0/0:10,0:10:13.28:0,13,87	0/0:11,1:12:5.48:0,5,137	0/0:11,0:9:21.48:0,21,110	0/1:5,0:7:19.52:28,0,20	0/0:3,0:3:7.97:0,8,37	0/0:7,0:7:15.87:0,16,76	0/0:7,0:7:17.39:0,17,94	0/1:8,1:9:17.03:17,0,56	0/0:5,0:5:8.68:0,9,46	0/0:6,0:5:10.16:0,10,42	0/1:12,2:11:57.52:58,0,89	0/0:17,0:17:36.12:0,36,183	0/0:1,0:1:2.88:0,3,15	0/1:4,0:8:17.91:42,0,18	0/1:5,0:6:12.67:28,0,13	0/1:4,0:4:1.95:6,0,2	0/1:17,3:20:44.73:45,0,185	0/0:18,0:17:41.33:0,41,209	0/1:11,1:11:27.65:28,0,107	./.
chr10	74603825	.	GT	G	1127.19	PASS	AC=18;AF=1.000;AN=18;BaseQRankSum=0.473;DP=93;FS=0.000;HRun=2;HaplotypeScore=110.8093;MQ=17.86;MQ0=57;MQRankSum=0.263;QD=22.54;ReadPosRankSum=-1.523;VQSLOD=3.0449;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:6,1:1:3.01:39,3,0	./.	./.	1/1:3,4:4:2.31:27,2,0	./.	./.	./.	./.	1/1:0,7:6:18.06:233,18,0	1/1:0,5:5:15.05:194,15,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,8:8:24.08:303,24,0	./.	1/1:0,3:3:9.02:105,9,0	1/1:0,5:5:15.04:181,15,0	./.	1/1:0,2:2:6.02:78,6,0	1/1:5,1:1:3.01:39,3,0	./.	./.
chr10	74603835	.	TTACCTAGGAAG	T	2279.44	PASS	AC=18;AF=1.000;AN=18;DP=86;FS=0.000;HRun=0;HaplotypeScore=120.1080;MQ=18.57;MQ0=50;QD=45.59;VQSLOD=3.2483;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:6,1:1:3.01:107,3,0	./.	./.	1/1:4,3:4:5.89:113,6,0	./.	./.	./.	./.	1/1:2,5:6:18.06:503,18,0	1/1:2,3:5:12.04:360,12,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:3,5:8:21.07:608,21,0	./.	1/1:1,2:3:6.02:205,6,0	1/1:2,3:5:9.03:311,9,0	./.	1/1:2,0:2:3.01:36,3,0	1/1:5,1:1:3.01:108,3,0	./.	./.
chr10	74603836	.	TA	T	630.63	PASS	AC=18;AF=1.000;AN=18;DP=85;FS=0.000;HRun=1;HaplotypeScore=115.5603;MQ=18.41;MQ0=50;QD=12.87;VQSLOD=2.4085;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:7,0:1:3:25,3,0	./.	./.	1/1:6,1:4:2.90:16,3,0	./.	./.	./.	./.	1/1:5,2:6:18.01:174,18,0	1/1:3,2:5:12.01:117,12,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:5,3:8:20.96:198,21,0	./.	1/1:2,1:3:5.87:41,6,0	1/1:3,1:4:8.80:67,9,0	./.	1/1:0,2:2:3.01:37,3,0	1/1:6,0:1:3:26,3,0	./.	./.
chr10	74603854	.	CCCTGGGTTTGG	C	2192.15	PASS	AC=16;AF=1.000;AN=16;DP=69;FS=0.000;HRun=0;HaplotypeScore=110.0308;MQ=16.47;MQ0=46;QD=56.21;VQSLOD=3.2379;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:6,1:1:3.01:110,3,0	./.	./.	1/1:3,3:3:8.90:185,9,0	./.	./.	./.	./.	1/1:1,5:4:12.04:445,12,0	1/1:0,3:3:9.03:333,9,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,5:5:15.05:548,15,0	./.	1/1:0,2:2:6.02:210,6,0	1/1:1,3:3:9.03:320,9,0	./.	./.	1/1:5,1:1:3.01:111,3,0	./.	./.
chr10	74603875	.	CCG	C	788.46	PASS	AB=0.778;AC=15;AF=0.938;AN=16;BaseQRankSum=1.255;DP=103;FS=0.000;HRun=0;HaplotypeScore=85.7466;MQ=19.26;MQ0=58;MQRankSum=-1.733;QD=14.08;ReadPosRankSum=1.494;VQSLOD=3.5244;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:8,1:3:3.01:37,3,0	./.	./.	1/1:6,1:4:5.38:37,5,0	./.	./.	./.	./.	1/1:1,7:6:18.06:250,18,0	1/1:4,3:6:11.07:128,11,0	./.	./.	./.	./.	./.	./.	./.	./.	0/1:5,2:6:48.61:65,0,49	./.	1/1:1,3:3:5.97:83,6,0	1/1:1,5:5:14.41:202,14,0	./.	./.	1/1:7,1:3:8.22:65,8,0	./.	./.
chr10	74603885	.	AG	A	623.30	PASS	AB=0.961;AC=23;AF=0.605;AN=38;BaseQRankSum=3.987;DP=180;FS=0.000;HRun=1;HaplotypeScore=82.0292;InbreedingCoeff=-0.1296;MQ=23.84;MQ0=63;MQRankSum=0.304;QD=4.30;ReadPosRankSum=2.260;VQSLOD=0.3103;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:2:0:0,0,0	0/1:12,0:6:14.33:37,0,14	./.	./.	0/1:6,2:7:1.14:1,0,13	0/0:6,0:3:6.01:0,6,62	0/0:4,0:1:3.01:0,3,32	./.	1/1:3,0:1:1.82:5,2,0	0/1:10,1:9:51.72:99,0,52	0/1:13,0:12:35.77:59,0,36	1/1:6,0:4:6.79:39,7,0	1/1:3,0:1:0.89:2,1,0	./.	1/1:5,0:2:5.87:36,6,0	1/1:5,0:3:5.93:40,6,0	./.	./.	./.	0/1:13,0:12:71.70:89,0,72	./.	1/1:5,1:5:11.44:71,11,0	1/1:11,0:10:14.35:77,14,0	./.	0/1:16,0:15:99:113,0,102	0/1:13,1:11:49.95:50,0,147	0/1:7,0:6:9.36:19,0,9	0/1:12,0:5:7.88:8,0,36
chr10	74605625	.	T	TA	4157.67	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.214;DP=628;FS=21.651;HRun=3;HaplotypeScore=68.5812;InbreedingCoeff=0.9962;MQ=88.03;MQ0=0;MQRankSum=0.481;QD=37.80;ReadPosRankSum=1.591;VQSLOD=1.6848;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,159,1828	0/0:8,0:8:24.07:0,24,288	0/0:25,0:25:60.18:0,60,720	0/0:19,0:19:52.95:0,53,545	0/0:26,0:26:78.21:0,78,911	0/0:23,0:23:66.20:0,66,792	0/0:23,0:23:69.21:0,69,828	0/0:25,0:25:63.18:0,63,747	1/1:1,20:21:57.19:798,57,0	0/0:17,0:17:51.16:0,51,612	0/0:12,0:12:33.08:0,33,384	1/1:0,19:19:54.16:755,54,0	1/1:1,18:19:54.18:756,54,0	0/0:21,0:21:54.15:0,54,637	0/0:22,0:22:63.18:0,63,744	0/0:24,0:24:63.19:0,63,756	0/0:32,0:32:96.29:0,96,1152	0/0:21,0:20:57.17:0,57,684	0/0:18,0:18:42.11:0,42,491	0/0:20,0:20:54.16:0,54,648	0/0:29,0:29:84.26:0,84,1008	1/1:1,12:13:36.12:504,36,0	1/1:1,12:13:30.03:420,30,0	1/1:0,25:25:66.22:924,66,0	0/0:20,0:20:57.17:0,57,684	0/0:39,0:39:99:0,117,1393	0/0:30,0:30:81.23:0,81,951	0/0:9,0:9:15.01:0,15,154
chr10	74605798	.	G	GA	874.65	PASS	AB=0.733;AC=18;AF=0.333;AN=54;BaseQRankSum=10.962;DP=455;FS=5.001;HRun=9;HaplotypeScore=66.0720;InbreedingCoeff=0.8597;MQ=68.51;MQ0=0;MQRankSum=-0.567;QD=7.05;ReadPosRankSum=-2.260;VQSLOD=1.0329;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:13,18:33:12.59:377,13,0	0/0:10,0:10:20.99:0,21,182	0/0:16,0:12:12.74:0,13,93	0/0:10,0:8:5.83:0,6,51	0/0:27,1:28:26.71:0,27,457	0/0:23,0:23:50.98:0,51,442	0/0:18,0:18:44:0,44,410	0/0:27,0:27:62.42:0,62,520	1/1:7,0:7:11.27:55,11,0	1/1:17,0:18:35.81:220,36,0	1/1:8,0:8:17.26:98,17,0	0/1:3,0:4:0:0,0,0	0/1:3,0:6:0:0,0,0	0/0:9,0:9:23.99:0,24,207	0/0:13,0:13:32.98:0,33,286	1/1:12,0:12:6.74:32,7,0	0/0:25,0:25:65.98:0,66,572	0/0:24,0:24:59.98:0,60,521	0/0:16,0:16:38.98:0,39,338	0/0:36,0:37:78.98:0,79,714	0/0:11,0:11:29.98:0,30,256	1/1:5,0:5:8.77:53,9,0	1/1:6,0:6:4.20:17,4,0	./.	1/1:24,1:24:37.28:208,37,0	0/0:24,0:24:59.98:0,60,520	0/0:21,0:21:50.93:0,51,430	0/0:15,0:15:39.46:0,39,340
chr10	74605806	.	A	AAAAT	2985.05	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=10.438;DP=456;FS=8.147;HRun=0;HaplotypeScore=84.1097;InbreedingCoeff=0.8498;MQ=64.27;MQ0=0;MQRankSum=-0.480;QD=23.14;ReadPosRankSum=-1.557;VQSLOD=2.3316;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:32:34.03:526,34,0	0/0:7,0:7:21.07:0,21,362	0/0:14,0:9:5.86:0,6,126	0/0:6,0:4:1.08:0,1,42	0/0:30,0:30:86.77:0,87,1099	0/0:20,0:20:57.01:0,57,875	0/0:17,0:17:51.13:0,51,815	0/0:34,0:34:99:0,99,1213	1/1:0,0:10:12:203,12,0	1/1:2,13:17:47.21:827,47,0	1/1:0,10:10:26.75:317,27,0	1/1:2,0:3:5.93:40,6,0	1/1:3,0:3:2.97:20,3,0	0/0:9,0:9:27.08:0,27,438	0/0:16,0:16:42.05:0,42,602	1/1:0,10:13:6.91:141,7,0	0/0:26,0:26:75.17:0,75,1155	0/0:24,0:24:69.17:0,69,1091	0/0:16,0:16:48.06:0,48,617	0/0:35,0:35:99:0,102,1509	0/0:10,0:10:30.04:0,30,433	1/1:1,0:5:8.94:92,9,0	1/1:1,0:4:8.94:101,9,0	1/1:2,0:2:2.96:19,3,0	1/1:4,26:28:39.09:903,39,0	0/0:23,0:23:69:0,69,1034	0/0:24,0:24:71.98:0,72,906	0/0:16,0:16:42.06:0,42,710
chr10	74605832	.	CAT	C	1287.98	PASS	AB=1.000;AC=18;AF=0.333;AN=54;BaseQRankSum=3.571;DP=483;FS=18.689;HRun=0;HaplotypeScore=72.4782;InbreedingCoeff=0.5878;MQ=58.07;MQ0=2;MQRankSum=0.365;QD=8.94;ReadPosRankSum=-3.835;VQSLOD=0.8454;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,2:36:47.30:530,47,0	0/0:4,0:4:9.03:0,9,147	0/0:8,0:3:2.04:0,2,6	./.	0/0:35,0:35:93.05:0,93,1403	0/0:24,0:24:59.86:0,60,742	0/0:14,0:14:27.08:0,27,416	0/0:44,2:46:87.85:0,88,1571	1/1:9,0:9:10.24:64,10,0	0/1:21,0:21:20.70:21,0,155	0/1:11,0:11:44.64:45,0,101	1/1:6,0:6:15.03:175,15,0	1/1:1,0:1:3.01:38,3,0	0/0:12,0:12:30.02:0,30,346	0/0:19,0:19:39.09:0,39,566	0/1:9,0:9:15.82:16,0,39	0/0:25,0:25:48.08:0,48,690	0/0:24,0:24:60.08:0,60,900	0/0:16,0:15:36.01:0,36,418	0/0:31,0:31:47.50:0,47,1178	0/0:11,0:11:27.05:0,27,372	1/1:6,0:6:14.86:146,15,0	1/1:10,0:10:26.40:268,26,0	1/1:5,0:5:12:121,12,0	0/1:30,0:29:54.20:54,0,162	0/0:23,1:24:21.99:0,22,759	0/0:20,0:20:60.19:0,60,963	0/0:22,1:23:25.07:0,25,889
chr10	74606779	.	G	GA	1960.69	PASS	AB=0.849;AC=17;AF=0.304;AN=56;BaseQRankSum=-0.705;DP=688;FS=0.827;HRun=13;HaplotypeScore=118.4892;InbreedingCoeff=0.1845;MQ=65.94;MQ0=4;MQRankSum=-0.224;QD=6.00;ReadPosRankSum=-1.623;VQSLOD=2.1629;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,130,891	0/0:11,0:12:28.77:0,29,191	0/0:40,0:20:20.93:0,21,170	0/1:32,0:14:4.76:15,0,5	0/1:30,2:33:11.98:12,0,294	0/0:15,0:16:31.76:0,32,211	0/1:12,3:17:21.88:22,0,142	0/1:22,1:24:6.91:7,0,128	0/1:10,10:21:37.90:284,0,38	0/1:6,0:27:26.66:27,0,53	0/0:2,0:21:4.65:0,5,42	0/1:10,10:21:3.19:144,0,3	1/1:16,8:27:17.62:344,18,0	0/0:20,0:23:33.70:0,34,219	0/0:18,0:21:42.46:0,42,270	0/0:2,0:25:26.55:0,27,88	0/0:32,0:32:61.75:0,62,416	1/1:2,12:14:30.03:279,30,0	0/0:24,0:27:10.99:0,11,271	0/0:21,0:27:35.78:0,36,313	0/0:21,0:23:51.56:0,52,340	1/1:5,16:21:27.11:377,27,0	0/1:17,10:26:7.75:347,0,8	0/1:6,19:26:5.40:265,0,5	0/1:6,0:22:7.12:7,0,46	0/0:21,0:21:2.42:0,2,154	0/0:18,0:22:49.60:0,50,274	0/1:11,1:12:0.18:0,0,127
chr10	74606789	.	A	AG	478.37	PASS	AB=0.979;AC=8;AF=0.143;AN=56;BaseQRankSum=8.655;DP=675;FS=35.227;HRun=0;HaplotypeScore=115.3363;InbreedingCoeff=0.1089;MQ=69.34;MQ0=4;MQRankSum=-2.706;QD=2.61;ReadPosRankSum=3.992;VQSLOD=1.5296;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:49,0:49:37.66:39,0,38	0/0:18,0:18:53.84:0,54,579	0/0:41,0:20:47.41:0,47,430	0/0:40,0:17:9.94:0,10,194	0/0:31,0:31:80.31:0,80,928	0/0:13,0:13:39.07:0,39,487	0/0:16,0:16:38.03:0,38,452	0/0:22,0:21:43.06:0,43,445	0/0:20,0:20:15.24:0,15,239	0/1:27,3:30:49.16:229,0,49	0/1:23,0:23:79.77:80,0,89	0/0:18,0:18:23.54:0,24,201	0/0:28,0:28:27.96:0,28,265	0/0:19,0:19:53.92:0,54,589	0/0:20,0:20:57.07:0,57,684	0/1:25,1:26:32.46:90,0,32	0/0:32,0:32:78.19:0,78,972	0/1:13,0:13:10.81:13,0,11	0/0:22,0:22:58.12:0,58,724	0/0:24,0:24:39.37:0,39,763	0/0:23,0:23:66.08:0,66,806	0/1:22,0:22:9.48:9,0,95	0/0:25,0:24:6.83:0,7,224	0/0:24,0:24:10.65:0,11,144	1/1:18,2:20:10.08:154,10,0	0/0:19,0:19:51.50:0,52,569	0/0:24,0:24:68.86:0,69,742	0/0:13,0:13:35.62:0,36,415
chr10	74608404	.	TGAGA	T	1446.05	PASS	AB=0.926;AC=24;AF=0.462;AN=52;BaseQRankSum=-2.270;DP=551;FS=10.562;HRun=0;HaplotypeScore=103.5876;InbreedingCoeff=0.5896;MQ=67.60;MQ0=10;MQRankSum=0.790;QD=6.05;ReadPosRankSum=0.463;VQSLOD=0.9881;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:11.64:0,12,180	1/1:7,2:9:5.97:66,6,0	./.	0/0:40,0:22:0.47:0,0,2	0/1:19,4:23:23.95:40,0,24	1/1:19,1:22:6.01:74,6,0	1/1:14,2:16:9.03:124,9,0	0/0:28,0:28:0.47:0,0,1	0/0:15,0:15:9.47:0,9,88	0/0:13,0:14:17.79:0,18,244	0/0:12,0:11:5.99:0,6,48	0/0:21,0:21:15.04:0,15,198	0/0:22,0:22:15.77:0,16,140	1/1:8,4:12:12.04:185,12,0	1/1:11,7:17:5.69:220,6,0	0/0:14,0:23:9.03:0,9,157	1/1:17,1:17:10.68:180,11,0	0/0:13,0:13:5.74:0,6,37	1/1:24,1:24:3.01:46,3,0	1/1:21,2:23:6.01:75,6,0	0/1:21,0:21:3.44:31,0,3	./.	0/0:22,0:21:9.01:0,9,103	0/0:16,0:16:26.94:0,27,217	0/0:11,0:11:12.03:0,12,152	1/1:19,0:19:1.32:41,1,0	1/1:14,11:25:30.10:464,30,0	1/1:5,1:6:6.01:74,6,0
chr10	74608451	.	G	GAGAGAT	2162.89	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=2.246;DP=662;FS=0.996;HRun=0;HaplotypeScore=142.0361;InbreedingCoeff=0.9829;MQ=70.02;MQ0=36;MQRankSum=-1.418;QD=18.33;ReadPosRankSum=-0.747;VQSLOD=3.0638;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:15.33:0,15,214	0/0:12,0:12:26.42:0,26,257	0/0:66,0:24:56.34:0,56,467	0/0:85,0:33:34.53:0,35,543	0/0:13,0:13:26.20:0,26,249	0/0:23,0:23:44.95:0,45,422	0/0:15,0:15:35.29:0,35,299	0/0:34,0:33:90.51:0,91,808	1/1:15,0:16:33.13:334,33,0	0/0:20,0:19:38.98:0,39,436	0/0:18,0:17:20.94:0,21,291	1/1:26,0:26:53.95:563,54,0	1/1:6,15:24:9.50:157,10,0	0/0:10,0:10:26.22:0,26,268	0/0:23,0:22:59.74:0,60,621	0/0:21,0:21:44.21:0,44,344	0/0:21,0:21:39.36:0,39,401	0/0:14,0:13:32.89:0,33,287	0/0:16,0:16:47.94:0,48,416	0/0:17,0:17:41.87:0,42,369	0/0:18,0:18:36.11:0,36,343	1/1:9,0:12:26.75:208,27,0	1/1:15,0:20:38.53:395,39,0	1/1:20,0:20:47.43:692,47,0	0/0:22,0:22:26.01:0,26,374	0/0:20,0:20:57.05:0,57,524	0/0:38,0:38:94.69:0,95,893	0/0:9,0:9:20.43:0,20,229
chr10	74608766	.	A	AAT	146.51	PASS	AB=0.697;AC=8;AF=0.143;AN=56;BaseQRankSum=7.508;DP=391;FS=8.100;HRun=0;HaplotypeScore=69.5054;InbreedingCoeff=0.0646;MQ=72.42;MQ0=1;MQRankSum=-0.606;QD=2.40;ReadPosRankSum=-1.229;VQSLOD=0.6654;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.15:0,57,885	0/0:6,0:6:18.06:0,18,288	0/0:8,0:6:11.54:0,12,77	0/1:13,0:12:21.82:22,0,110	0/0:17,0:19:56.46:0,56,773	0/0:16,0:16:45.07:0,45,595	0/0:16,0:16:48.15:0,48,747	0/0:33,0:33:93.21:0,93,1296	0/1:4,0:6:34.39:48,0,34	0/0:13,0:12:30.13:0,30,154	0/0:11,0:11:19.62:0,20,158	0/1:2,0:9:25.94:57,0,26	0/1:3,0:8:12.49:37,0,12	0/0:8,0:8:18.02:0,18,257	0/0:13,0:13:36.10:0,36,576	0/0:12,0:12:9.54:0,10,103	0/0:29,0:31:89.62:0,90,1324	0/0:13,0:13:39.03:0,39,520	0/0:13,0:13:39.09:0,39,536	0/0:16,0:16:45.12:0,45,678	0/0:12,0:12:36.09:0,36,509	1/1:0,0:2:2.90:16,3,0	0/1:6,1:10:59.38:59,0,66	0/1:3,0:9:10.47:40,0,10	0/0:17,0:17:32.75:0,33,236	0/0:24,0:24:72.18:0,72,1020	0/0:15,0:15:42.05:0,42,554	0/0:11,0:12:35.33:0,35,533
chr10	74608777	.	TAA	T	1845.90	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=11.196;DP=384;FS=9.939;HRun=6;HaplotypeScore=60.5459;InbreedingCoeff=0.8729;MQ=72.85;MQ0=1;MQRankSum=-0.949;QD=19.03;ReadPosRankSum=2.564;VQSLOD=0.3922;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.22:0,87,1379	0/0:7,0:7:21.07:0,21,358	0/1:9,0:6:8.96:9,0,78	0/0:15,0:13:11.61:0,12,220	0/0:22,0:22:60.19:0,60,954	0/0:12,0:12:36.11:0,36,556	0/0:16,0:16:48.16:0,48,818	0/0:28,0:28:66.22:0,66,1097	1/1:3,0:3:8.71:57,9,0	1/1:0,11:12:36.09:447,36,0	1/1:2,10:14:27.07:331,27,0	1/1:5,0:5:11.65:84,12,0	1/1:9,0:8:17.42:135,17,0	0/0:9,0:9:27.08:0,27,428	0/0:17,0:17:51.17:0,51,864	1/1:2,9:12:17.78:216,18,0	0/0:29,0:29:78.25:0,78,1283	0/0:12,0:12:36.10:0,36,582	0/0:11,0:11:27.08:0,27,433	0/0:18,0:18:48.15:0,48,765	0/0:10,0:10:24.04:0,24,380	1/1:2,0:2:3:26,3,0	1/1:9,0:8:13.79:133,14,0	1/1:8,0:8:10.40:86,10,0	1/1:0,13:14:42.12:533,42,0	0/0:21,0:21:60.19:0,60,971	0/0:16,0:16:48.16:0,48,801	0/0:15,0:15:45.15:0,45,739
chr10	74608899	.	AC	A	676.22	PASS	AB=0.795;AC=11;AF=0.196;AN=56;BaseQRankSum=9.846;DP=457;FS=12.252;HRun=1;HaplotypeScore=67.3257;InbreedingCoeff=0.1703;MQ=59.08;MQ0=6;MQRankSum=-7.173;QD=7.60;ReadPosRankSum=0.067;VQSLOD=-0.5978;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:6.60:0,7,55	0/0:9,0:9:27.07:0,27,387	0/0:40,1:19:30.84:0,31,458	0/0:23,2:10:10.03:0,10,141	0/0:24,0:24:69.10:0,69,968	0/0:21,0:21:63.14:0,63,859	0/0:14,0:14:39.13:0,39,596	0/0:25,0:25:65.43:0,65,886	1/1:5,1:6:11.76:107,12,0	1/1:7,5:11:17.48:115,17,0	0/1:4,7:11:21.04:140,0,21	0/1:8,1:9:16.73:134,0,17	0/1:5,1:4:28.21:30,0,28	0/0:9,0:9:27.09:0,27,409	0/0:11,0:11:33.07:0,33,453	0/1:7,3:10:62.56:75,0,63	0/0:28,0:28:81.27:0,81,1210	0/0:27,0:27:78.14:0,78,1102	0/0:17,0:17:51.15:0,51,734	0/0:26,0:25:75.25:0,75,1131	0/0:16,0:16:41.70:0,42,577	0/0:5,0:5:4.50:0,5,59	0/1:13,5:17:98.96:99,0,124	0/1:8,3:11:28.12:117,0,28	0/1:5,1:6:16.85:17,0,38	0/0:20,0:20:60.19:0,60,884	0/0:22,0:22:66.20:0,66,974	0/0:8,0:8:24.05:0,24,311
chr10	74608900	.	C	CAAA	1402.64	PASS	AB=0.923;AC=18;AF=0.321;AN=56;BaseQRankSum=11.802;DP=470;FS=1.881;HRun=3;HaplotypeScore=88.9639;InbreedingCoeff=0.7515;MQ=60.00;MQ0=6;MQRankSum=-7.509;QD=12.41;ReadPosRankSum=0.747;VQSLOD=0.3739;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:24:18.06:360,18,0	0/0:10,0:10:27.07:0,27,403	0/0:43,0:19:38.25:0,38,441	0/0:25,0:11:8.57:0,9,141	0/0:23,0:23:60.20:0,60,929	0/0:21,0:21:54.13:0,54,769	0/0:14,0:14:39.13:0,39,615	0/0:25,0:25:56.45:0,56,833	1/1:6,0:6:11.86:128,12,0	1/1:13,0:11:5.71:34,6,0	0/1:9,0:11:17.13:45,0,17	1/1:8,1:9:23.06:193,23,0	1/1:5,0:4:12.03:152,12,0	0/0:9,0:9:27.08:0,27,400	0/0:12,0:12:27.07:0,27,403	0/1:10,0:10:45.77:46,0,60	0/0:29,0:29:81.27:0,81,1252	0/0:30,0:30:72.15:0,72,1079	0/0:17,0:17:48.15:0,48,705	0/0:26,0:25:72.24:0,72,1129	0/0:16,0:16:18.23:0,18,565	1/1:1,1:5:5.43:75,5,0	1/1:16,2:17:29.48:366,29,0	1/1:10,1:11:17.48:201,17,0	0/0:6,0:6:3.61:0,4,54	0/0:20,0:20:57.16:0,57,851	0/0:22,0:22:60.20:0,60,944	0/0:8,0:8:24.05:0,24,311
chr10	74608903	.	AC	A	1166.45	PASS	AB=0.909;AC=21;AF=0.375;AN=56;BaseQRankSum=11.416;DP=463;FS=12.048;HRun=1;HaplotypeScore=66.1181;InbreedingCoeff=0.6993;MQ=60.08;MQ0=6;MQRankSum=-7.707;QD=8.04;ReadPosRankSum=-0.394;VQSLOD=-0.5479;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:17.47:100,17,0	0/0:10,0:10:30.08:0,30,380	0/0:43,2:20:41.57:0,42,411	0/1:27,2:14:21.50:21,0,96	0/0:22,0:22:60.18:0,60,780	0/0:20,0:20:57.14:0,57,703	0/0:14,0:14:39.10:0,39,496	0/0:22,0:22:55.75:0,56,712	1/1:5,1:6:11.76:109,12,0	1/1:10,4:12:7.71:133,8,0	1/1:5,6:11:10.81:173,11,0	1/1:7,1:8:15.82:169,16,0	1/1:6,0:4:9.35:69,9,0	0/0:9,0:9:27.07:0,27,344	0/0:10,0:10:30.10:0,30,389	0/1:8,1:9:13.91:72,0,14	0/0:30,0:30:79.79:0,80,1076	0/0:28,0:28:81.12:0,81,994	0/0:17,0:17:43.72:0,44,573	0/0:26,0:25:72.19:0,72,938	0/0:14,2:16:3.59:0,4,501	1/1:4,0:4:5.56:29,6,0	1/1:17,0:16:31.63:254,32,0	1/1:10,0:10:20.53:184,21,0	0/1:7,1:8:30.81:57,0,31	0/0:19,0:19:57.16:0,57,732	0/0:21,0:21:63.18:0,63,815	0/0:9,0:9:26.85:0,27,288
chr10	74610754	.	AAAG	A	1446.65	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=9.557;DP=518;FS=0.410;HRun=0;HaplotypeScore=101.0814;InbreedingCoeff=0.4941;MQ=55.45;MQ0=18;MQRankSum=-6.708;QD=7.74;ReadPosRankSum=-0.553;VQSLOD=2.9530;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,2:27:58.96:457,59,0	0/0:9,0:9:14.78:0,15,191	0/0:19,0:8:0.70:0,1,91	0/0:14,0:6:14.55:0,15,114	0/0:28,0:27:23.15:0,23,518	0/0:19,0:19:49.78:0,50,673	0/0:12,0:10:30.03:0,30,411	0/0:34,0:34:70.19:0,70,754	0/1:12,0:12:27.91:86,0,28	1/1:18,0:17:32.11:171,32,0	1/1:21,1:21:36.19:254,36,0	0/1:15,0:15:45.67:69,0,46	1/1:11,0:11:1.77:125,2,0	0/0:19,0:19:48.26:0,48,565	0/0:11,0:11:23.48:0,23,283	1/1:13,1:14:21.32:123,21,0	0/0:35,0:31:77.15:0,77,1009	0/0:18,0:15:8.56:0,9,121	0/0:21,0:19:47.87:0,48,544	0/0:25,0:24:57.87:0,58,734	0/0:13,0:13:24.12:0,24,208	0/1:18,0:17:48.42:48,0,51	0/1:20,0:20:27.73:28,0,88	0/1:12,0:11:15.95:43,0,16	1/1:14,3:17:29.06:230,29,0	0/0:14,0:14:28.44:0,28,407	0/0:22,0:22:54.85:0,55,624	0/0:18,0:17:33.93:0,34,456
chr10	74610755	.	AAG	A	1580.76	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=6.936;DP=512;FS=14.914;HRun=0;HaplotypeScore=91.3531;InbreedingCoeff=0.5052;MQ=55.94;MQ0=17;MQRankSum=-7.517;QD=7.79;ReadPosRankSum=-3.993;VQSLOD=1.3606;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:28,2:29:73.71:534,74,0	0/0:9,0:9:14.33:0,14,139	0/0:19,0:8:0.57:0,1,89	0/0:14,0:6:14.74:0,15,117	0/1:27,0:26:12.80:13,0,369	0/0:19,0:19:45.46:0,45,526	0/0:12,0:10:29.89:0,30,313	0/0:33,0:33:67.66:0,68,641	0/1:12,0:12:26.86:27,0,31	1/1:16,2:17:40.38:263,40,0	1/1:17,5:21:44:337,44,0	0/1:15,0:15:4.91:5,0,72	0/1:11,0:11:2.91:49,0,3	0/0:19,0:19:47.89:0,48,475	0/0:11,0:11:19.90:0,20,211	1/1:12,2:14:26.76:228,27,0	0/0:32,0:29:58.81:0,59,739	0/1:18,0:15:13.48:13,0,71	0/0:21,0:19:47.80:0,48,469	0/0:26,0:25:45.16:0,45,586	0/0:10,0:10:24.03:0,24,179	0/0:18,0:17:11.20:0,11,93	0/1:20,0:20:4.78:5,0,91	0/0:12,0:11:16.24:0,16,81	1/1:13,3:16:37.07:290,37,0	0/0:14,0:14:16.68:0,17,347	0/0:22,0:22:50.30:0,50,529	0/0:18,0:17:30.66:0,31,382
chr10	74610762	.	AG	A	565.30	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=7.339;DP=500;FS=2.686;HRun=1;HaplotypeScore=85.2976;InbreedingCoeff=0.8827;MQ=60.11;MQ0=9;MQRankSum=-4.498;QD=7.25;ReadPosRankSum=-2.749;VQSLOD=-0.1529;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:39.83:0,40,294	0/0:11,0:11:14.89:0,15,362	0/0:22,0:11:25.91:0,26,277	0/0:14,0:6:13.05:0,13,115	0/0:26,0:26:56.43:0,56,822	0/0:18,0:18:54.14:0,54,762	0/0:11,0:10:29.92:0,30,389	0/0:43,0:43:99:0,113,1528	0/0:11,0:11:24.39:0,24,210	1/1:13,1:14:12.96:119,13,0	1/1:20,0:20:41.97:235,42,0	0/0:15,0:15:39.90:0,40,404	0/0:11,0:11:16.18:0,16,170	0/0:14,0:14:39.13:0,39,573	0/0:12,0:12:24.88:0,25,349	1/1:13,1:14:19.97:168,20,0	0/0:28,1:27:64.42:0,64,1009	0/1:14,0:13:3.47:3,0,149	0/0:22,0:20:47.16:0,47,724	0/0:26,0:25:68.93:0,69,985	0/0:10,0:10:30.01:0,30,370	0/0:18,0:17:44.88:0,45,457	0/0:20,0:20:27.93:0,28,321	0/0:11,1:12:33.55:0,34,372	1/1:16,0:16:32.37:198,32,0	0/0:11,0:11:33.03:0,33,437	0/0:23,0:23:60.10:0,60,780	0/0:17,0:17:31.12:0,31,558
chr10	74610763	.	G	GA	1178.45	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.727;DP=499;FS=10.275;HRun=5;HaplotypeScore=84.9970;InbreedingCoeff=0.9571;MQ=61.09;MQ0=8;MQRankSum=-1.999;QD=18.41;ReadPosRankSum=-2.055;VQSLOD=2.0933;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:26.05:0,26,591	0/0:11,0:11:29.92:0,30,339	0/0:23,0:12:22.32:0,22,253	0/0:15,0:7:4.77:0,5,90	0/0:26,0:26:66.08:0,66,765	0/0:18,0:18:54.17:0,54,663	0/0:11,0:10:29.76:0,30,333	0/0:43,0:43:99:0,111,1366	0/0:11,0:11:27.02:0,27,284	1/1:9,5:14:26.95:326,27,0	1/1:13,7:20:35.88:432,36,0	0/0:15,0:15:42.05:0,42,480	0/0:12,0:12:27.04:0,27,290	0/0:14,0:14:39.12:0,39,479	0/0:12,0:12:30.07:0,30,342	1/1:10,4:14:19.90:166,20,0	0/0:28,0:27:75.18:0,75,910	0/0:14,0:13:17.16:0,17,187	0/0:21,0:19:54.15:0,54,650	0/0:26,0:25:69.21:0,69,854	0/0:10,0:10:27.08:0,27,331	0/0:18,0:17:42.13:0,42,503	0/0:20,0:20:30.03:0,30,350	0/0:12,0:12:36.06:0,36,419	1/1:10,6:16:34.35:414,34,0	0/0:12,0:12:27.08:0,27,335	0/0:20,0:20:57.17:0,57,692	0/0:17,0:17:41.23:0,41,518
chr10	74613039	.	TCACACACA	T	974.72	PASS	AB=0.859;AC=8;AF=0.160;AN=50;BaseQRankSum=2.129;DP=466;FS=5.530;HRun=0;HaplotypeScore=126.1861;InbreedingCoeff=0.5792;MQ=44.44;MQ0=35;MQRankSum=0.491;QD=8.63;ReadPosRankSum=-2.235;VQSLOD=1.3423;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:5:6.02:0,6,136	./.	0/0:2,0:2:6.02:0,6,190	0/0:15,0:14:10.48:0,10,330	0/0:20,0:19:24.08:0,24,631	0/0:29,0:26:20.15:0,20,494	0/0:14,0:19:7.45:0,7,272	1/1:14,0:14:8.95:168,9,0	0/0:10,0:10:11.52:0,12,129	0/0:6,0:5:6.02:0,6,215	0/1:14,9:23:0:0,0,0	1/1:11,10:21:8.72:208,9,0	0/0:18,0:17:16.33:0,16,228	0/0:30,0:29:29.30:0,29,969	0/0:24,0:23:21.33:0,21,651	0/0:16,0:13:30.10:0,30,718	0/0:10,0:8:21.04:0,21,322	0/0:10,0:10:9.45:0,9,122	0/0:15,0:13:4.82:0,5,135	0/0:20,0:17:15.50:0,16,416	./.	1/1:9,10:17:5.71:39,6,0	0/1:36,0:35:6.36:685,0,6	0/0:11,0:9:6.02:0,6,190	0/0:18,0:14:27.09:0,27,767	0/0:25,0:24:42.06:0,42,980	0/0:7,0:5:12.04:0,12,386
chr10	74615688	.	T	TA	739.06	PASS	AB=0.866;AC=20;AF=0.909;AN=22;BaseQRankSum=-2.322;DP=37;FS=0.000;HRun=2;HaplotypeScore=17.2224;InbreedingCoeff=-0.2237;MQ=137.16;MQ0=0;MQRankSum=-1.177;QD=22.40;ReadPosRankSum=0.095;VQSLOD=3.1647;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:3:25,3,0	1/1:1,0:1:3.01:40,3,0	0/1:4,1:6:6.02:122,0,6	0/1:6,1:6:16.71:37,0,17	1/1:0,1:1:3.01:48,3,0	1/1:0,2:2:6.02:96,6,0	1/1:1,0:1:2.98:22,3,0	./.	./.	1/1:0,3:3:9.03:144,9,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,3:3:6.02:96,6,0	./.	1/1:0,3:3:3.01:48,3,0	./.	./.	./.	1/1:0,3:3:9.03:144,9,0	./.	./.
chr10	74618012	.	T	TG	4535.85	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-12.020;DP=703;FS=3.731;HRun=6;HaplotypeScore=71.5825;InbreedingCoeff=0.9856;MQ=77.58;MQ0=2;MQRankSum=-4.174;QD=30.86;ReadPosRankSum=2.997;VQSLOD=5.5718;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,29:39:81.24:1001,81,0	0/0:8,0:8:24.05:0,24,245	0/0:37,0:32:65.37:0,65,604	0/0:34,0:32:46.86:0,47,708	0/0:30,0:30:84.17:0,84,846	0/0:26,0:26:63.12:0,63,629	0/0:22,0:22:63.09:0,63,618	0/0:28,0:28:72.15:0,72,726	0/0:21,0:21:57.11:0,57,571	1/1:2,28:30:78.71:970,79,0	1/1:2,19:21:51.16:641,51,0	0/0:22,0:22:51.10:0,51,513	0/0:11,0:11:23.88:0,24,228	0/0:23,0:23:66.15:0,66,673	0/0:23,0:23:63.12:0,63,634	1/1:3,21:24:60.19:755,60,0	0/0:27,0:28:74.19:0,74,740	0/0:31,0:31:90.16:0,90,900	0/0:26,0:26:69.10:0,69,689	0/0:27,0:27:75.13:0,75,749	0/0:24,0:24:66.12:0,66,661	0/0:19,0:19:57.13:0,57,581	0/0:19,0:19:54.11:0,54,546	0/0:22,0:22:57.12:0,57,581	1/1:0,33:33:93.30:1169,93,0	0/0:38,2:40:35.72:0,36,986	0/0:28,0:27:78.13:0,78,781	0/0:7,0:7:9.02:0,9,92
chr10	74618826	.	AT	A	294.59	PASS	AB=0.911;AC=4;AF=0.074;AN=54;BaseQRankSum=4.860;DP=533;FS=1.336;HRun=12;HaplotypeScore=63.9571;InbreedingCoeff=0.3626;MQ=59.55;MQ0=5;MQRankSum=0.979;QD=4.68;ReadPosRankSum=2.039;VQSLOD=1.3431;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,25:30:19.59:382,20,0	0/0:15,0:16:41.39:0,41,382	./.	0/1:10,1:8:11.96:12,0,41	0/0:25,2:28:17.40:0,17,518	0/1:16,2:18:4.12:4,0,297	0/0:12,1:16:9.63:0,10,254	0/0:23,0:22:38.70:0,39,362	0/0:19,1:20:12.87:0,13,305	0/0:17,0:16:21.04:0,21,212	0/0:12,2:14:9.83:0,10,281	0/0:18,0:18:39.07:0,39,392	0/0:13,1:14:6.46:0,6,221	0/0:19,1:19:21.20:0,21,371	0/0:20,0:20:49.61:0,50,481	0/0:21,0:21:48.10:0,48,487	0/0:22,1:23:25.16:0,25,418	0/0:30,1:29:34.42:0,34,481	0/0:18,1:20:15.63:0,16,316	0/0:15,0:15:32.97:0,33,306	0/0:12,1:15:6.49:0,6,218	0/0:17,1:16:18.85:0,19,373	0/0:17,1:18:18.85:0,19,373	0/0:22,2:23:2.34:0,2,371	0/0:27,0:27:49.30:0,49,479	0/0:19,1:21:33.36:0,33,477	0/0:17,2:21:27.62:0,28,427	0/0:6,0:7:20.88:0,21,197
chr10	74619873	.	TTGTGTGTG	T	1282.94	PASS	AB=0.779;AC=20;AF=0.385;AN=52;BaseQRankSum=6.989;DP=707;FS=0.752;HRun=0;HaplotypeScore=176.5715;InbreedingCoeff=0.6263;MQ=58.86;MQ0=30;MQRankSum=-7.223;QD=4.35;ReadPosRankSum=3.029;VQSLOD=2.6600;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:45:12.04:203,12,0	0/0:5,0:5:9.03:0,9,185	./.	./.	0/0:22,0:19:12.04:0,12,371	0/0:17,0:17:18.06:0,18,537	0/0:33,0:35:54.18:0,54,1622	0/0:18,0:17:7.22:0,7,90	0/1:15,5:21:43.76:44,0,53	1/1:19,0:25:12.04:223,12,0	1/1:6,0:12:3.01:56,3,0	0/1:18,6:24:32.63:263,0,33	1/1:17,6:23:9.03:181,9,0	0/0:23,0:24:30.10:0,30,1027	0/0:31,0:31:35.76:0,36,1142	1/1:14,0:33:11.57:223,12,0	0/0:34,0:31:50.91:0,51,1458	0/0:17,0:22:12.02:0,12,280	0/0:24,0:21:21.07:0,21,514	0/0:16,0:18:27.09:0,27,760	0/0:49,0:46:54.16:0,54,1395	1/1:13,10:22:11.91:199,12,0	1/1:9,2:11:0.47:1,0,0	1/1:32,19:51:2.37:8,2,0	1/1:13,0:17:3.01:56,3,0	0/0:41,0:41:33.07:0,33,685	0/0:19,0:23:36.12:0,36,1143	0/0:3,0:1:3.01:0,3,83
chr10	74621241	.	T	TA	4816.06	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-9.331;DP=586;FS=5.555;HRun=1;HaplotypeScore=57.3205;InbreedingCoeff=0.9998;MQ=89.06;MQ0=0;MQRankSum=-1.403;QD=42.25;ReadPosRankSum=2.460;VQSLOD=5.3436;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.19:0,78,958	0/0:11,0:11:30.10:0,30,389	0/0:31,0:31:84.22:0,84,1047	0/0:14,0:14:42.02:0,42,465	0/0:17,0:17:51.17:0,51,662	0/0:20,0:20:57.09:0,57,692	0/0:28,0:28:81.21:0,81,1003	0/0:22,0:22:57.18:0,57,728	1/1:0,11:11:33.11:494,33,0	0/0:31,0:31:87.28:0,87,1119	0/0:28,0:28:84.25:0,84,1060	1/1:0,16:16:48.16:719,48,0	1/1:0,22:22:63.21:937,63,0	0/0:13,0:13:36.10:0,36,443	0/0:21,0:21:57.19:0,57,739	0/0:15,0:15:45.08:0,45,563	0/0:24,0:24:63.20:0,63,801	0/0:24,0:24:60.19:0,60,774	0/0:16,0:16:48.12:0,48,573	0/0:18,0:18:48.14:0,48,609	0/0:26,0:26:75.22:0,75,946	1/1:1,17:18:48.08:691,48,0	1/1:1,26:27:78.26:1169,78,0	1/1:0,20:20:54.18:806,54,0	0/0:22,0:22:66.20:0,66,844	0/0:26,0:26:78.24:0,78,989	0/0:20,0:20:54.18:0,54,701	0/0:15,0:15:45.12:0,45,556
chr10	74622606	.	AAGG	A	1284.43	PASS	AB=0.917;AC=24;AF=0.444;AN=54;BaseQRankSum=7.005;DP=278;FS=0.000;HRun=0;HaplotypeScore=60.8490;InbreedingCoeff=0.4117;MQ=39.41;MQ0=40;MQRankSum=-8.082;QD=8.23;ReadPosRankSum=-0.688;VQSLOD=2.4973;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,5:8:16.87:212,17,0	0/1:10,1:9:13.98:14,0,236	0/0:6,0:1:3:0,3,28	0/0:7,0:2:5.75:0,6,51	0/0:4,0:4:6.02:0,6,104	0/0:14,0:12:15.37:0,15,347	0/0:9,2:9:10.06:0,10,169	0/1:20,2:16:72.12:72,0,407	1/1:10,0:9:7.94:119,8,0	1/1:3,2:5:11.37:100,11,0	1/1:6,1:7:5.98:63,6,0	1/1:10,0:8:13.33:136,13,0	1/1:10,0:7:14.03:94,14,0	0/0:6,0:5:10.62:0,11,190	0/0:12,0:11:4.73:0,5,437	1/1:6,0:6:8.43:104,8,0	0/0:13,0:8:18.06:0,18,297	0/1:7,1:7:33.45:33,0,240	0/1:13,2:11:91.38:91,0,246	0/0:8,0:8:13.75:0,14,201	0/0:24,1:20:41.32:0,41,748	1/1:15,0:14:16.13:211,16,0	1/1:8,1:8:13.94:85,14,0	0/1:11,0:10:9.78:63,0,10	0/1:8,1:6:46.69:76,0,47	0/0:11,0:8:20.57:0,21,326	./.	0/0:5,0:5:11.87:0,12,119
chr10	74622607	.	AGGG	A	1308.06	PASS	AB=0.828;AC=18;AF=0.333;AN=54;BaseQRankSum=8.046;DP=281;FS=0.000;HRun=4;HaplotypeScore=61.5921;InbreedingCoeff=0.3879;MQ=39.44;MQ0=40;MQRankSum=-7.922;QD=11.18;ReadPosRankSum=0.165;VQSLOD=-0.4504;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:14.86:112,15,0	0/0:11,0:9:4.86:0,5,322	0/0:6,0:1:2.88:0,3,15	0/0:6,1:2:6.01:0,6,63	0/0:4,0:4:6.02:0,6,140	0/0:14,0:12:27.75:0,28,486	0/0:12,0:10:15.04:0,15,291	0/0:22,0:16:6.22:0,6,553	0/1:6,4:9:13.64:189,0,14	0/1:4,1:5:0.98:64,0,1	1/1:3,4:7:11.89:94,12,0	1/1:5,5:8:6.89:232,7,0	1/1:6,4:7:12.51:167,13,0	0/0:6,0:5:12:0,12,274	0/0:12,0:11:24.58:0,25,577	1/1:3,4:7:15.21:139,15,0	0/0:13,0:8:21.03:0,21,433	0/0:8,0:7:0.89:0,1,335	0/1:15,0:11:22.45:22,0,295	0/0:8,0:8:14.91:0,15,281	0/0:25,0:20:42.61:0,43,978	0/1:12,3:14:14.40:217,0,14	1/1:6,4:9:7.25:101,7,0	0/1:6,5:10:7.99:90,0,8	0/1:8,1:6:53.98:54,0,64	0/0:11,0:8:20.75:0,21,449	./.	0/0:5,0:5:8.82:0,9,112
chr10	74623302	.	A	AACT	11665.73	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-13.543;DP=812;FS=3.606;HRun=0;HaplotypeScore=106.9158;InbreedingCoeff=0.9969;MQ=81.82;MQ0=0;MQRankSum=-4.453;QD=52.79;ReadPosRankSum=4.848;VQSLOD=6.6793;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,40:43:99:2371,108,0	0/0:13,0:13:33.11:0,33,537	0/0:19,0:19:48.13:0,48,711	0/0:26,0:26:63.18:0,63,970	0/0:37,0:37:99:0,108,1745	0/0:27,0:27:81.28:0,81,1305	0/0:27,0:27:72.23:0,72,1142	0/0:35,0:35:99:0,99,1514	1/1:4,25:29:69.24:1488,69,0	0/0:30,0:30:90.30:0,90,1438	0/0:23,0:23:51.16:0,51,795	1/1:2,28:30:81.28:1775,81,0	1/1:1,20:24:48.16:1064,48,0	0/0:23,0:23:66.23:0,66,1073	0/0:38,0:38:99:0,108,1735	0/0:28,1:29:14.77:0,15,1191	0/0:35,0:35:96.33:0,96,1557	0/0:25,0:25:72.16:0,72,1077	0/0:24,0:24:66.21:0,66,1043	0/0:33,0:33:96.33:0,96,1555	0/0:44,0:44:99:0,120,1929	1/1:3,33:36:99:2156,99,0	1/1:3,23:27:60.07:1290,60,0	1/1:1,30:32:68.65:1521,69,0	0/0:17,0:17:48.16:0,48,781	0/0:35,0:35:99:0,102,1643	0/0:27,0:27:78.22:0,78,1232	0/0:24,0:24:69.24:0,69,1117
chr10	74623861	.	C	CAA	3519.10	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=6.792;DP=589;FS=9.920;HRun=10;HaplotypeScore=84.0448;InbreedingCoeff=0.8921;MQ=64.77;MQ0=0;MQRankSum=0.670;QD=27.07;ReadPosRankSum=-0.757;VQSLOD=2.6797;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,1:32:69.10:691,69,0	0/0:4,0:4:6:0,6,61	0/1:11,0:8:2.46:2,0,69	0/0:15,0:10:9.26:0,9,63	0/0:26,0:26:66.10:0,66,671	0/0:24,0:24:57.02:0,57,563	0/0:18,0:18:46.40:0,46,485	0/0:34,0:34:69.08:0,69,702	0/0:16,0:16:39.01:0,39,383	1/1:5,16:23:53.51:726,54,0	1/1:3,14:18:42.10:602,42,0	0/0:14,0:14:30.03:0,30,299	0/0:26,0:28:62.83:0,63,622	0/0:24,0:24:63.08:0,63,627	0/0:25,0:25:54.07:0,54,543	1/1:2,20:23:60.20:872,60,0	0/0:27,0:27:60.03:0,60,599	0/0:12,0:12:36.08:0,36,366	0/0:22,0:23:47.81:0,48,469	0/0:24,0:24:60.10:0,60,610	0/0:13,0:13:24.01:0,24,236	0/0:18,0:18:51.11:0,51,519	0/0:16,0:16:42.06:0,42,427	0/0:26,0:26:63.03:0,63,628	1/1:4,19:23:42.14:626,42,0	0/0:32,1:34:36.27:0,36,796	0/0:23,0:24:53.82:0,54,595	0/0:14,0:14:38.10:0,38,372
chr10	74624651	.	GCACACACACACACA	G	2984.54	PASS	AB=0.647;AC=21;AF=0.404;AN=52;BaseQRankSum=7.919;DP=452;FS=15.311;HRun=0;HaplotypeScore=186.6650;InbreedingCoeff=0.7688;MQ=56.80;MQ0=10;MQRankSum=-7.338;QD=17.05;ReadPosRankSum=3.141;VQSLOD=1.6268;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,5:31:12.47:374,12,0	0/0:9,0:9:18.53:0,19,884	./.	./.	0/0:12,0:12:18.06:0,18,1056	0/0:14,0:14:15.05:0,15,856	0/0:23,0:25:38.76:0,39,2009	0/0:18,0:17:16.61:0,17,496	1/1:4,7:11:9.03:321,9,0	1/1:9,0:14:12.04:391,12,0	1/1:7,0:8:3.01:98,3,0	1/1:12,9:21:15.01:581,15,0	1/1:5,4:9:9.03:342,9,0	0/0:13,0:13:12.04:0,12,742	0/0:10,0:10:24.08:0,24,1243	1/1:10,0:11:3.01:98,3,0	0/0:35,0:34:56.21:0,56,3165	0/0:29,0:36:69.24:0,69,3195	0/0:13,0:13:9.03:0,9,545	0/0:17,0:17:33.10:0,33,1733	0/0:19,0:20:12.04:0,12,558	1/1:8,7:15:6.02:235,6,0	0/1:5,6:11:28.58:132,0,29	1/1:19,7:26:6.02:217,6,0	1/1:10,0:14:12.04:386,12,0	0/0:15,0:13:33.11:0,33,1869	0/0:12,0:14:24.55:0,25,1380	0/0:12,0:11:15.05:0,15,839
chr10	74626349	.	C	CCCATGAT	7255.16	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-8.363;DP=672;FS=7.160;HRun=0;HaplotypeScore=155.3897;InbreedingCoeff=0.9986;MQ=81.89;MQ0=0;MQRankSum=-12.039;QD=93.01;ReadPosRankSum=-1.362;VQSLOD=5.6712;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,2838	0/0:11,0:11:30.06:0,30,665	0/0:20,0:20:57.14:0,57,1123	0/0:22,0:22:56.16:0,56,1113	0/0:21,0:21:54.19:0,54,1337	0/0:22,0:22:60.20:0,60,1495	0/0:31,0:31:90.04:0,90,2090	0/0:30,0:30:78.26:0,78,1953	0/0:24,0:24:69.24:0,69,1741	1/1:4,23:30:87.28:3109,87,0	1/1:2,6:12:21.07:777,21,0	0/0:14,0:14:36.11:0,36,872	0/0:14,0:14:42.10:0,42,1021	0/0:31,0:31:87.30:0,87,2194	0/0:23,0:23:66.23:0,66,1667	1/1:4,13:18:48.16:1866,48,0	0/0:50,0:50:99:0,147,3421	0/0:27,0:27:81.21:0,81,1893	0/0:29,0:29:84.28:0,84,2091	0/0:19,0:19:57.18:0,57,1382	0/0:40,0:40:99:0,105,2475	0/0:25,0:25:75.22:0,75,1751	0/0:27,0:27:75.26:0,75,1900	0/0:25,0:25:75.26:0,75,1910	1/1:1,15:18:42.14:1504,42,0	0/0:17,0:16:42.14:0,42,1081	0/0:15,0:15:45.12:0,45,1066	0/0:18,0:18:45.15:0,45,1158
chr10	74626714	.	TTG	T	1302.97	PASS	AB=0.900;AC=18;AF=0.346;AN=52;BaseQRankSum=8.591;DP=578;FS=1.140;HRun=0;HaplotypeScore=81.0391;InbreedingCoeff=0.1981;MQ=61.47;MQ0=6;MQRankSum=0.860;QD=4.72;ReadPosRankSum=0.831;VQSLOD=2.4615;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:8.75:0,9,66	0/1:6,1:7:25.04:25,0,83	./.	./.	0/1:20,2:22:54.86:55,0,220	0/0:16,3:19:5.10:0,5,515	0/0:24,2:26:14.07:0,14,543	0/1:36,0:36:25.88:26,0,180	1/1:8,10:18:15.04:170,15,0	0/0:25,0:24:11.25:0,11,434	0/0:11,0:10:9.01:0,9,107	0/1:5,10:16:11.50:164,0,11	1/1:4,8:12:9.03:102,9,0	0/1:19,2:21:25.77:26,0,441	0/1:24,0:23:2.27:2,0,515	0/0:29,0:30:9.28:0,9,598	0/0:30,1:32:8.42:0,8,735	0/1:26,1:26:10.95:11,0,647	0/1:14,1:15:24.97:25,0,83	0/0:16,0:16:6.11:0,6,343	0/0:23,0:22:1.87:0,2,426	1/1:13,5:19:9.03:102,9,0	1/1:9,13:22:11.92:135,12,0	1/1:14,22:37:57:627,57,0	0/0:10,0:9:3.74:0,4,192	0/0:18,0:18:30.02:0,30,329	0/0:17,0:17:26.32:0,26,455	0/0:8,0:8:5.22:0,5,304
chr10	74626745	.	T	TGTGTGTGC	349.49	PASS	AB=1.000;AC=8;AF=0.148;AN=54;BaseQRankSum=-0.732;DP=520;FS=5.184;HRun=0;HaplotypeScore=148.1019;InbreedingCoeff=0.0940;MQ=60.47;MQ0=4;MQRankSum=-1.297;QD=2.48;ReadPosRankSum=-3.753;VQSLOD=1.0808;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,21:35:9.03:254,9,0	0/0:6,0:6:18.01:0,18,311	0/0:7,0:3:3.48:0,3,36	./.	0/0:21,0:21:43.62:0,44,728	0/0:16,0:16:39.13:0,39,1051	0/0:36,0:36:85.04:0,85,1473	0/0:16,0:16:45.01:0,45,545	0/1:17,0:17:48.84:49,0,171	0/0:23,0:24:39.30:0,39,805	0/0:11,0:10:17.96:0,18,211	0/1:14,0:14:0.92:1,0,236	0/1:13,0:13:58.33:58,0,74	0/0:20,0:20:57.04:0,57,1127	0/0:24,0:23:66.07:0,66,1231	0/0:23,0:25:61.49:0,61,1015	0/0:34,0:33:84.14:0,84,1671	0/0:27,0:26:7.91:0,8,1522	0/0:14,0:13:35.89:0,36,467	0/0:14,0:14:41.83:0,42,799	0/0:25,0:24:65.87:0,66,1043	0/1:10,0:10:11.67:12,0,53	0/1:17,0:17:33.70:34,0,70	0/1:34,0:34:71.10:71,0,565	0/0:10,0:11:23.97:0,24,363	0/0:17,0:17:43.48:0,43,630	0/0:16,0:16:47.99:0,48,964	0/0:8,0:8:24.08:0,24,651
chr10	74626825	.	CA	C	2599.61	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.075;DP=652;FS=6.620;HRun=3;HaplotypeScore=78.1185;InbreedingCoeff=0.9997;MQ=88.12;MQ0=0;MQRankSum=-10.784;QD=31.70;ReadPosRankSum=0.992;VQSLOD=3.6149;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,105,1511	0/0:11,0:11:30.09:0,30,415	0/0:24,0:24:66.22:0,66,932	0/0:25,0:25:65.57:0,66,861	0/0:30,0:30:90.29:0,90,1277	0/0:16,0:16:48.15:0,48,673	0/0:21,0:21:63.19:0,63,858	0/0:27,0:27:78.25:0,78,1090	0/0:18,0:18:54.18:0,54,777	1/1:4,22:26:69.20:839,69,0	1/1:0,15:15:42.13:520,42,0	0/0:15,0:15:45.11:0,45,624	0/0:22,0:22:66.20:0,66,928	0/0:26,0:26:72.23:0,72,1017	0/0:20,0:20:60.20:0,60,863	1/1:3,22:25:32.16:808,32,0	0/0:36,0:36:99:0,105,1466	0/0:15,0:15:45.13:0,45,624	0/0:25,0:25:75.19:0,75,999	0/0:16,0:16:48.14:0,48,657	0/0:33,0:33:90.28:0,90,1258	0/0:25,0:25:75.25:0,75,1079	0/0:22,0:22:63.17:0,63,853	0/0:29,0:29:87.21:0,87,1206	1/1:0,16:16:48.15:593,48,0	0/0:25,0:25:75.25:0,75,1080	0/0:30,0:29:90.27:0,90,1246	0/0:17,0:16:51.17:0,51,734
chr10	74626854	.	T	TG	3162.94	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.899;DP=661;FS=2.557;HRun=3;HaplotypeScore=77.8061;InbreedingCoeff=0.9988;MQ=80.02;MQ0=0;MQRankSum=-7.498;QD=33.65;ReadPosRankSum=-0.591;VQSLOD=3.8043;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,123,1366	0/0:7,0:7:21.06:0,21,252	0/0:19,0:19:40.95:0,41,467	0/0:20,0:20:47.73:0,48,501	0/0:28,0:28:78.24:0,78,933	0/0:15,0:15:42.10:0,42,489	0/0:24,0:24:63.18:0,63,746	0/0:22,0:22:60.18:0,60,712	0/0:23,0:23:63.19:0,63,756	1/1:1,26:27:75.25:1041,75,0	1/1:2,17:19:48.16:670,48,0	0/0:17,0:17:45.14:0,45,540	0/0:24,0:24:72.18:0,72,838	0/0:32,0:32:93.16:0,93,1051	0/0:20,0:20:54.15:0,54,633	1/1:3,27:30:45.18:986,45,0	0/0:38,0:38:99:0,105,1231	0/0:21,0:21:63.19:0,63,756	0/0:18,0:18:51.15:0,51,604	0/0:15,0:15:45.14:0,45,540	0/0:36,0:36:99:0,102,1224	0/0:29,0:29:84.25:0,84,996	0/0:22,0:22:60.18:0,60,717	0/0:24,0:24:69.16:0,69,811	1/1:1,17:18:53.83:627,54,0	0/0:24,0:24:72.21:0,72,853	0/0:27,0:27:72.21:0,72,851	0/0:16,0:16:48.15:0,48,576
chr10	74627016	.	A	AGAG	7190.67	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=2.316;DP=692;FS=2.563;HRun=0;HaplotypeScore=118.8415;InbreedingCoeff=0.7855;MQ=69.48;MQ0=1;MQRankSum=-2.680;QD=27.34;ReadPosRankSum=2.899;VQSLOD=4.9037;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:34:69.24:1423,69,0	0/0:9,0:9:18.06:0,18,263	0/0:33,0:26:25.46:0,25,297	0/0:37,0:32:40.71:0,41,509	0/0:13,0:13:33.08:0,33,444	0/0:11,0:11:24.07:0,24,332	0/0:26,0:26:72.16:0,72,922	0/0:22,0:22:44.20:0,44,580	1/1:29,0:29:37.17:671,37,0	1/1:5,16:21:51.01:764,51,0	1/1:3,9:12:12.04:248,12,0	1/1:28,0:28:1.12:401,1,0	1/1:24,0:24:3.87:484,4,0	0/0:33,0:33:78.21:0,78,1064	0/0:30,0:30:69.13:0,69,908	1/1:4,28:32:66.23:1344,66,0	0/0:35,0:35:87.21:0,87,1173	0/0:28,0:28:34.30:0,34,969	0/0:22,0:21:39.11:0,39,521	0/0:18,0:18:48:0,48,659	0/0:25,0:25:54.14:0,54,730	0/1:18,0:18:10.18:298,0,10	0/1:21,0:21:18.35:397,0,18	1/1:32,0:31:57.18:727,57,0	1/1:0,11:11:21.07:433,21,0	0/0:30,0:30:69.21:0,69,972	0/0:38,0:38:90.26:0,90,1255	0/0:17,0:17:45.15:0,45,658
chr10	74627029	.	G	GAGC	7401.65	PASS	AB=0.983;AC=18;AF=0.321;AN=56;BaseQRankSum=14.484;DP=675;FS=2.526;HRun=0;HaplotypeScore=108.4457;InbreedingCoeff=0.6792;MQ=66.36;MQ0=1;MQRankSum=-1.769;QD=27.31;ReadPosRankSum=7.675;VQSLOD=4.8030;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:0.40:775,0,0	0/0:11,0:11:27.04:0,27,325	0/0:22,0:19:45.07:0,45,554	0/0:32,0:24:35.22:0,35,507	0/0:14,0:14:38.76:0,39,507	0/0:10,0:10:27.08:0,27,385	0/0:33,0:33:87.20:0,87,1132	0/0:25,0:25:60.13:0,60,740	1/1:4,23:28:54.19:1136,54,0	0/1:24,1:24:1:443,0,1	0/1:10,0:10:14.94:128,0,15	1/1:10,16:26:33.11:694,33,0	1/1:6,20:27:39.13:819,39,0	0/0:29,0:29:72.22:0,72,1043	0/0:27,0:27:69.09:0,69,910	0/1:32,1:33:25.54:792,0,26	0/0:32,0:32:90.20:0,90,1293	0/0:26,1:27:18.31:0,18,1023	0/0:17,0:17:39.11:0,39,540	0/0:23,0:23:66.08:0,66,841	0/0:21,0:21:60.13:0,60,799	1/1:5,14:20:24.08:503,24,0	1/1:6,20:27:33.11:682,33,0	1/1:2,26:27:57.20:1199,57,0	0/1:12,0:12:9.87:229,0,10	0/0:27,0:27:72.23:0,72,1047	0/0:34,0:34:96.06:0,96,1245	0/0:19,0:19:51.12:0,51,723
chr10	74631048	.	AG	A	2097	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.033;DP=660;FS=1.597;HRun=1;HaplotypeScore=70.6843;InbreedingCoeff=0.9835;MQ=79.84;MQ0=0;MQRankSum=-0.707;QD=30.84;ReadPosRankSum=2.318;VQSLOD=3.4776;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,178,2802	0/0:3,0:3:9.03:0,9,144	0/0:20,0:20:59.87:0,60,896	0/0:29,0:29:84.16:0,84,1226	0/0:31,0:31:93.27:0,93,1408	0/0:25,0:25:75.19:0,75,1145	0/0:23,0:23:69.22:0,69,1076	0/0:49,0:49:99:0,144,2218	0/0:24,0:24:69.22:0,69,1079	1/1:0,21:21:60.17:709,60,0	1/1:0,16:16:45.14:540,45,0	0/0:24,0:24:72.25:0,72,1150	0/0:15,0:15:45.15:0,45,718	0/0:27,0:27:81.25:0,81,1251	0/0:26,0:26:78.27:0,78,1238	1/1:0,12:12:33.10:396,33,0	0/0:28,0:28:84.25:0,84,1281	0/0:16,0:16:48.14:0,48,742	0/0:25,0:25:72.22:0,72,1073	0/0:10,0:10:30.09:0,30,456	0/0:31,0:31:93.30:0,93,1452	0/0:16,0:16:48.15:0,48,741	0/0:10,0:10:30.10:0,30,479	0/0:21,0:21:63.19:0,63,981	1/1:0,19:19:51.16:612,51,0	0/0:22,1:23:33.21:0,33,997	0/0:40,0:39:99:0,117,1845	0/0:15,0:15:45.15:0,45,719
chr10	74631718	.	TACAC	T	1191.97	PASS	AB=0.946;AC=18;AF=0.321;AN=56;BaseQRankSum=2.513;DP=578;FS=9.517;HRun=0;HaplotypeScore=106.0319;InbreedingCoeff=0.3862;MQ=66.47;MQ0=8;MQRankSum=2.386;QD=6.21;ReadPosRankSum=1.569;VQSLOD=1.4774;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:34:23.54:0,24,308	0/0:2,0:3:6.02:0,6,143	0/0:28,0:17:2.96:0,3,19	0/0:40,0:22:3.01:0,3,42	0/0:5,0:5:3.01:0,3,71	0/0:19,0:21:0.73:0,1,273	0/1:42,0:42:39.53:40,0,710	0/0:30,0:30:25.05:0,25,212	1/1:5,0:5:6.01:72,6,0	1/1:7,0:7:2.69:20,3,0	0/0:13,0:14:2.88:0,3,15	1/1:14,4:19:11.97:159,12,0	1/1:5,3:8:11.95:149,12,0	0/0:14,0:14:15.05:0,15,276	0/1:14,1:15:29.40:29,0,339	0/0:5,0:7:5.96:0,6,45	0/0:25,0:26:57.08:0,57,1062	0/0:39,0:40:62.68:0,63,1376	0/1:18,1:19:22.81:23,0,293	0/0:7,0:6:9.03:0,9,181	0/0:79,0:84:99:0,116,2228	1/1:4,9:13:6.02:95,6,0	1/1:4,5:10:2.84:47,3,0	1/1:13,24:37:45.15:711,45,0	0/0:7,0:8:5.48:0,5,36	0/1:13,1:14:18.47:18,0,428	0/0:10,0:11:17.77:0,18,248	0/0:10,0:10:17.81:0,18,249
chr10	74631769	.	GCATGCACA	G	814.19	PASS	AB=0.571;AC=7;AF=0.125;AN=56;BaseQRankSum=6.631;DP=670;FS=8.382;HRun=0;HaplotypeScore=165.9784;InbreedingCoeff=0.8146;MQ=52.55;MQ0=21;MQRankSum=-3.043;QD=16.96;ReadPosRankSum=-2.169;VQSLOD=2.1698;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:74.90:0,75,2937	0/0:6,0:6:15.05:0,15,369	0/0:38,0:10:9.16:0,9,582	0/0:35,0:7:21.07:0,21,524	0/0:10,0:10:27.09:0,27,873	0/0:11,0:11:27.08:0,27,980	0/0:31,0:31:76.10:0,76,2863	0/0:39,0:37:96.18:0,96,2781	0/0:20,0:20:48.03:0,48,1904	1/1:3,14:16:44:811,44,0	0/1:3,9:12:0:0,0,0	0/0:26,0:26:51.17:0,51,1853	0/0:12,0:12:36.12:0,36,1308	0/0:16,0:16:48.16:0,48,1775	0/0:24,0:24:60.21:0,60,2354	1/1:2,7:9:5.92:113,6,0	0/0:35,0:35:92.75:0,93,3665	0/0:33,0:33:93.23:0,93,3203	0/0:19,0:14:42.14:0,42,1418	0/0:16,0:15:39.13:0,39,1575	0/0:110,0:106:99:0,258,9202	0/0:13,0:13:30.10:0,30,1088	0/0:11,0:11:26.96:0,27,1022	0/0:47,0:47:99:0,120,4323	1/1:2,8:10:1.55:4,2,0	0/0:17,0:17:31:0,31,1361	0/0:13,0:13:39.13:0,39,1459	0/0:8,0:8:24.08:0,24,1000
chr10	74634562	.	C	CG	5497.46	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.641;DP=667;FS=4.511;HRun=1;HaplotypeScore=76.1441;InbreedingCoeff=1.0000;MQ=82.56;MQ0=0;MQRankSum=-1.766;QD=42.29;ReadPosRankSum=3.650;VQSLOD=5.1894;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:68,0:68:99:0,199,2762	0/0:15,0:15:42.13:0,42,570	0/0:19,0:19:57.13:0,57,757	0/0:18,0:18:44.30:0,44,544	0/0:22,0:22:66.21:0,66,888	0/0:23,0:23:69.15:0,69,903	0/0:27,0:27:78.26:0,78,1091	0/0:18,0:18:54.17:0,54,738	1/1:1,17:18:48.16:767,48,0	0/0:24,0:24:69.21:0,69,915	0/0:19,0:19:57.19:0,57,797	1/1:0,18:18:47.83:766,48,0	1/1:1,20:21:60.20:948,60,0	0/0:25,0:25:72.20:0,72,980	0/0:19,0:19:54.16:0,54,722	0/0:23,0:23:69.22:0,69,947	0/0:35,0:35:99:0,105,1467	0/0:23,0:23:66.22:0,66,917	0/0:20,0:20:57.19:0,57,790	0/0:23,0:23:63.21:0,63,879	0/0:36,0:36:99:0,102,1427	1/1:1,26:27:72.25:1148,72,0	1/1:0,15:15:45.15:719,45,0	1/1:0,31:31:72.25:1149,72,0	0/0:18,0:18:54.16:0,54,734	0/0:27,0:27:78.26:0,78,1087	0/0:23,0:22:69.23:0,69,962	0/0:12,0:12:36.12:0,36,504
chr10	74634688	.	AG	A	1457.62	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.931;DP=654;FS=1.334;HRun=3;HaplotypeScore=69.3208;InbreedingCoeff=0.9959;MQ=82.07;MQ0=0;MQRankSum=-4.800;QD=33.90;ReadPosRankSum=0.980;VQSLOD=4.1847;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,43:43:99:1553,111,0	0/0:7,0:7:21.07:0,21,335	0/0:15,0:15:38.99:0,39,565	0/0:23,0:23:60.50:0,61,895	0/0:16,0:16:48.16:0,48,767	0/0:26,0:26:78.27:0,78,1247	0/0:21,0:21:63.21:0,63,1005	0/0:28,0:27:78.25:0,78,1215	0/0:20,0:20:60.20:0,60,957	0/0:26,0:26:75.26:0,75,1197	0/0:18,0:18:51.16:0,51,793	0/0:20,0:20:60.19:0,60,923	0/0:24,0:24:72.21:0,72,1121	0/0:17,0:17:51.17:0,51,814	0/0:18,0:18:51.17:0,51,815	0/0:24,0:24:72.25:0,72,1150	0/0:32,0:32:96.31:0,96,1504	0/0:26,0:26:78.27:0,78,1246	0/0:32,0:32:96.09:0,96,1460	0/0:18,0:18:54.17:0,54,840	0/0:32,0:32:96.31:0,96,1506	0/0:18,0:18:54.18:0,54,862	0/0:15,0:15:45.15:0,45,718	0/0:38,0:38:99:0,108,1720	0/0:21,0:21:63.20:0,63,975	0/0:22,0:22:66.22:0,66,1042	0/0:37,0:36:99:0,111,1766	0/0:17,0:17:51.17:0,51,812
chr10	74635462	.	ATCAATGATGATAAATTCC	A	14404.58	PASS	AB=0.900;AC=15;AF=0.268;AN=56;BaseQRankSum=14.834;DP=555;FS=0.409;HRun=0;HaplotypeScore=272.9241;InbreedingCoeff=0.9363;MQ=65.12;MQ0=0;MQRankSum=-14.414;QD=86.77;ReadPosRankSum=0.605;VQSLOD=4.1392;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,33:43:75.26:3785,75,0	0/0:8,0:8:24.08:0,24,1971	0/0:4,0:4:10.85:0,11,302	0/1:8,0:9:1.65:2,0,66	0/0:18,0:18:54.19:0,54,4202	0/0:22,0:22:66.23:0,66,5606	0/0:22,0:22:66.23:0,66,4949	0/0:16,0:16:45.15:0,45,3021	1/1:6,25:31:57.20:2966,57,0	0/0:22,0:22:63.16:0,63,5221	0/0:10,0:10:30.10:0,30,2482	1/1:2,11:13:27.98:1321,28,0	1/1:2,13:15:33.11:1732,33,0	0/0:24,0:24:69.22:0,69,5518	0/0:40,0:40:99:0,120,9824	0/0:14,0:14:42.14:0,42,3573	0/0:33,0:33:99:0,99,7819	0/0:19,0:18:57.20:0,57,4261	0/0:22,0:22:63.19:0,63,4380	0/0:17,0:17:45.63:0,46,3723	0/0:23,0:23:69.22:0,69,5655	1/1:4,12:16:33.11:1653,33,0	1/1:3,19:22:42.14:2037,42,0	1/1:4,13:17:20.08:908,20,0	0/0:19,0:19:57.20:0,57,4852	0/0:22,0:22:63.22:0,63,4755	0/0:25,0:25:75.26:0,75,5795	0/0:9,0:9:27.09:0,27,2317
chr10	74636055	.	T	TA	1011.85	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=0.447;DP=561;FS=4.577;HRun=9;HaplotypeScore=74.2654;InbreedingCoeff=0.7900;MQ=68.93;MQ0=7;MQRankSum=1.037;QD=8.23;ReadPosRankSum=1.300;VQSLOD=1.8833;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:50,0:50:66.15:66,0,113	0/0:8,0:8:14.97:0,15,126	0/0:37,0:19:3.19:0,3,204	0/0:33,0:28:35.12:0,35,311	0/0:23,0:23:26.24:0,26,377	0/0:16,0:16:41.99:0,42,364	0/0:18,0:18:50.99:0,51,442	0/0:30,0:30:65.96:0,66,571	0/0:14,0:14:31.03:0,31,151	1/1:10,17:26:19.15:436,19,0	1/1:5,16:20:35.13:371,35,0	0/0:17,0:17:38.46:0,38,198	0/0:17,0:17:38.44:0,38,198	0/0:12,0:12:35.99:0,36,312	0/0:23,0:23:53.47:0,53,464	1/1:2,9:10:15.04:165,15,0	0/0:26,2:27:41.81:0,42,583	0/0:16,0:16:44.64:0,45,369	0/0:24,0:24:59.88:0,60,505	0/0:15,0:15:41.98:0,42,364	0/0:17,0:17:44.63:0,45,366	0/0:8,0:8:19.70:0,20,122	0/0:16,0:16:27.24:0,27,153	0/0:15,0:15:29.78:0,30,136	1/1:1,12:13:12.03:133,12,0	0/0:20,1:21:11.80:0,12,331	0/0:26,0:26:71.91:0,72,611	0/0:3,0:3:9:0,9,78
chr10	74636063	.	AAG	A	1825.90	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.830;DP=573;FS=6.898;HRun=0;HaplotypeScore=76.9041;InbreedingCoeff=0.9215;MQ=67.72;MQ0=7;MQRankSum=-0.194;QD=22.00;ReadPosRankSum=4.736;VQSLOD=3.8401;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:51:78:0,78,704	0/0:7,0:7:15.03:0,15,213	0/0:37,0:16:17.33:0,17,221	0/0:27,0:21:20.15:0,20,215	0/0:24,1:25:15.35:0,15,627	0/0:17,0:17:45.13:0,45,664	0/0:20,0:20:46.01:0,46,665	0/0:30,0:30:57.15:0,57,798	1/1:2,13:15:38.61:438,39,0	0/0:23,0:22:42.10:0,42,453	0/0:23,0:22:42:0,42,486	1/1:3,11:14:33.10:393,33,0	1/1:4,11:15:33.10:393,33,0	0/0:14,0:14:33.10:0,33,490	0/0:22,0:22:54.14:0,54,782	0/0:12,0:11:21.50:0,22,216	0/0:28,0:27:66.22:0,66,1024	0/0:17,1:18:3.34:0,3,464	0/0:26,0:26:45.08:0,45,632	0/0:16,0:16:36.11:0,36,537	0/0:17,1:18:3.34:0,3,463	1/1:4,8:12:17.93:180,18,0	1/1:5,8:13:21.06:250,21,0	1/1:2,12:14:30.09:357,30,0	0/0:18,0:17:27.02:0,27,256	0/0:23,0:23:63.17:0,63,852	0/0:27,0:27:60.18:0,60,913	0/0:7,0:6:17.99:0,18,189
chr10	74636326	.	A	AT	1374.65	PASS	AB=0.636;AC=21;AF=0.375;AN=56;BaseQRankSum=-5.457;DP=288;FS=13.207;HRun=9;HaplotypeScore=34.1400;InbreedingCoeff=0.7534;MQ=80.42;MQ0=2;MQRankSum=-0.529;QD=18.09;ReadPosRankSum=-0.290;VQSLOD=1.9830;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:57.15:629,57,0	0/0:3,0:3:9:0,9,78	0/0:13,0:8:5.89:0,6,42	0/0:13,0:11:4.45:0,4,66	0/0:12,0:12:29.53:0,30,233	0/0:15,0:15:44.67:0,45,375	0/0:9,0:9:26.98:0,27,231	0/0:25,0:25:47.93:0,48,409	1/1:1,6:7:9.02:99,9,0	1/1:3,4:7:12.03:132,12,0	1/1:5,3:8:11.90:114,12,0	1/1:0,3:3:9.02:99,9,0	1/1:3,0:3:3.01:32,3,0	0/0:3,0:3:9:0,9,78	0/0:9,0:9:26.99:0,27,234	1/1:3,2:5:12.02:123,12,0	0/0:16,0:16:35.95:0,36,304	0/0:19,0:19:44.96:0,45,384	0/0:15,0:15:38.99:0,39,338	0/0:9,0:9:11.99:0,12,103	0/0:11,0:11:32.87:0,33,276	1/1:1,1:2:3:29,3,0	1/1:0,1:1:3.01:33,3,0	0/1:3,4:7:33.79:114,0,34	1/1:4,8:12:15.04:166,15,0	0/0:15,0:15:35.99:0,36,312	0/0:17,0:17:47.96:0,48,411	0/0:8,0:8:24:0,24,208
chr10	74636673	.	T	TCAC	6543.83	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-4.710;DP=680;FS=0.000;HRun=0;HaplotypeScore=84.1324;InbreedingCoeff=0.8406;MQ=62.14;MQ0=19;MQRankSum=0.204;QD=24.06;ReadPosRankSum=1.692;VQSLOD=4.7751;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,6:31:45.14:831,45,0	0/0:6,0:5:11.40:0,11,128	0/0:38,0:20:9:0,9,91	0/1:40,0:20:9.80:10,0,29	0/0:17,0:17:25.10:0,25,370	0/0:14,0:11:27.06:0,27,340	0/0:41,0:34:56.97:0,57,671	0/0:30,0:27:21.02:0,21,249	1/1:19,7:25:48.15:899,48,0	1/1:21,4:24:33.10:604,33,0	1/1:2,1:2:3.01:60,3,0	1/1:20,8:27:53.97:854,54,0	1/1:24,8:30:57.14:1000,57,0	0/0:31,0:29:54.17:0,54,732	0/0:23,0:23:42.03:0,42,508	1/1:12,4:16:33.08:558,33,0	0/0:31,0:31:69.16:0,69,882	0/0:18,0:18:38.91:0,39,449	0/0:21,0:18:3.17:0,3,117	0/0:9,0:9:18.03:0,18,216	0/0:65,0:54:71.93:0,72,895	1/1:7,3:10:20.88:321,21,0	1/1:11,2:12:18.04:321,18,0	1/1:25,10:34:4.02:847,4,0	1/1:9,2:9:12.04:239,12,0	0/0:29,0:29:42.13:0,42,568	0/0:24,0:24:45.03:0,45,577	0/0:11,0:10:18.03:0,18,215
chr10	74636766	.	T	TCAC	2061.90	PASS	AB=0.740;AC=17;AF=0.304;AN=56;BaseQRankSum=-2.363;DP=1004;FS=0.598;HRun=0;HaplotypeScore=100.0186;InbreedingCoeff=0.5550;MQ=43.17;MQ0=128;MQRankSum=-0.725;QD=6.12;ReadPosRankSum=-0.002;VQSLOD=2.5707;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,19:29:9.03:189,9,0	0/0:10,0:8:15.01:0,15,181	0/0:14,0:3:2.50:0,2,9	0/0:15,0:3:8.38:0,8,74	0/0:12,0:9:6.02:0,6,89	0/0:33,0:22:54.02:0,54,730	0/0:69,0:48:99:0,110,1501	0/0:64,0:34:57.01:0,57,678	1/1:17,22:35:18.06:351,18,0	0/1:35,4:23:52.67:376,0,53	1/1:18,0:13:2.98:22,3,0	0/1:30,17:43:99:101,0,183	1/1:20,17:39:2.91:308,3,0	0/0:48,0:40:69.18:0,69,1015	0/0:34,0:31:63.18:0,63,890	1/1:10,11:19:6.02:100,6,0	0/0:47,0:45:88.87:0,89,1249	0/0:27,0:26:25.44:0,25,743	0/0:37,0:20:33.56:0,34,442	0/0:12,0:11:18.05:0,18,250	0/0:127,0:93:99:0,148,2170	0/1:9,15:23:14.94:356,0,15	1/1:7,8:9:6.02:126,6,0	1/1:18,22:33:7.81:306,8,0	0/0:11,10:16:5.91:0,6,84	0/0:47,0:33:67.05:0,67,943	0/0:29,0:27:63.74:0,64,821	0/0:20,0:16:30.07:0,30,427
chr10	74637501	.	TTG	T	93.56	PASS	AB=0.932;AC=9;AF=0.188;AN=48;BaseQRankSum=3.375;DP=513;FS=0.000;HRun=0;HaplotypeScore=80.0103;InbreedingCoeff=-0.1152;MQ=59.18;MQ0=4;MQRankSum=0.502;QD=0.52;ReadPosRankSum=1.137;VQSLOD=1.3733;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:28:8.52:42,9,0	0/0:9,0:9:9.03:0,9,136	./.	./.	0/0:18,0:17:22.24:0,22,264	0/0:24,5:29:20.95:0,21,641	0/0:15,0:17:0.90:0,1,167	0/0:30,0:30:29.78:0,30,289	0/0:11,0:17:2.78:0,3,18	0/1:15,2:17:42.41:42,0,192	0/1:17,0:17:17.19:17,0,225	0/0:6,0:12:4.30:0,4,16	0/0:9,0:15:5.90:0,6,40	0/0:14,0:14:1.32:0,1,243	0/0:11,0:11:18.05:0,18,252	0/0:15,0:14:14.92:0,15,134	0/0:25,0:25:8.97:0,9,393	./.	./.	0/1:19,0:19:9.22:9,0,219	0/1:24,3:26:29.37:29,0,366	0/0:11,0:16:2.74:0,3,12	0/0:14,0:20:2.99:0,3,24	0/0:16,0:16:8.62:0,9,104	0/0:11,0:16:6.01:0,6,69	0/1:29,3:32:27.46:27,0,409	0/1:20,2:22:32.34:32,0,369	0/1:16,2:18:21.11:21,0,123
chr10	74638434	.	T	TTG	1156.89	PASS	AB=0.872;AC=9;AF=0.167;AN=54;BaseQRankSum=-4.071;DP=634;FS=0.678;HRun=0;HaplotypeScore=100.0427;InbreedingCoeff=0.0334;MQ=57.86;MQ0=12;MQRankSum=2.587;QD=4.76;ReadPosRankSum=0.825;VQSLOD=2.9019;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,1:32:1.40:197,0,1	0/0:8,0:11:14.56:0,15,108	0/1:31,0:15:0:0,0,0	./.	0/0:29,0:28:11.38:0,11,185	0/0:18,0:18:17.85:0,18,162	0/0:25,0:24:24.03:0,24,246	0/0:27,0:27:20.58:0,21,163	0/0:14,0:14:11.86:0,12,113	0/0:16,0:15:11.98:0,12,125	0/0:15,0:15:15.47:0,15,150	0/0:14,0:14:15.03:0,15,157	0/0:13,0:14:17.84:0,18,158	0/0:11,0:11:23.92:0,24,255	0/0:25,0:23:27.03:0,27,266	0/1:11,1:15:6.38:6,0,291	0/0:26,0:32:39.72:0,40,530	0/0:15,0:17:25.23:0,25,217	0/1:16,0:16:5.17:38,0,5	0/1:13,4:20:54.93:117,0,55	0/1:35,29:63:78.62:324,0,79	0/0:22,0:22:18.62:0,19,148	0/0:14,0:16:14.84:0,15,138	0/0:33,0:35:45.07:0,45,369	0/0:11,0:11:2.40:0,2,149	0/1:22,1:29:40.25:317,0,40	0/1:13,11:27:78.11:194,0,78	0/1:8,0:8:7.80:93,0,8
chr10	74638522	.	C	CA	8982.31	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.449;DP=527;FS=1.922;HRun=0;HaplotypeScore=79.7549;InbreedingCoeff=0.9947;MQ=77.60;MQ0=0;MQRankSum=-1.376;QD=44.47;ReadPosRankSum=3.800;VQSLOD=5.2536;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:96.33:1535,96,0	0/0:4,0:4:12.04:0,12,168	0/0:16,0:16:48.13:0,48,614	0/0:31,0:29:80.92:0,81,1045	0/0:20,0:20:57.19:0,57,797	0/0:17,0:17:51.16:0,51,696	0/0:22,0:22:66.21:0,66,904	0/0:30,0:30:87.27:0,87,1174	1/1:1,10:11:27.09:414,27,0	1/1:1,11:12:33.09:478,33,0	1/1:1,14:15:36.12:574,36,0	1/1:0,16:16:48.16:767,48,0	1/1:0,17:17:51.17:815,51,0	0/0:9,0:9:27.08:0,27,361	0/0:21,0:21:63.21:0,63,881	1/1:0,10:10:27.09:432,27,0	0/0:25,0:25:72.21:0,72,980	0/0:15,0:15:45.13:0,45,611	0/0:18,0:18:54.18:0,54,755	0/0:16,0:16:48.16:0,48,671	0/0:31,0:31:84.28:0,84,1174	1/1:0,24:24:69.24:1099,69,0	1/1:0,15:15:43.39:670,43,0	1/1:1,36:37:99:1673,105,0	1/1:0,11:11:33.11:524,33,0	0/0:27,0:27:81.27:0,81,1133	0/0:15,0:15:36.12:0,36,502	0/0:8,0:8:24.08:0,24,334
chr10	74638755	.	A	ATG	1458.42	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.923;DP=688;FS=0.619;HRun=0;HaplotypeScore=92.4426;InbreedingCoeff=0.9894;MQ=65.28;MQ0=6;MQRankSum=-0.468;QD=31.70;ReadPosRankSum=-0.333;VQSLOD=5.3867;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,36:45:34.11:1553,34,0	0/0:8,0:8:21.07:0,21,260	0/0:48,0:34:53.90:0,54,568	0/0:38,0:28:53.49:0,53,598	0/0:20,0:21:59.97:0,60,680	0/0:26,0:25:72.21:0,72,877	0/0:26,0:26:72.15:0,72,849	0/0:34,0:34:63.19:0,63,770	0/0:18,0:18:45.13:0,45,544	0/0:23,0:23:60.18:0,60,734	0/0:11,0:12:26.90:0,27,298	0/0:20,0:20:60.16:0,60,708	0/0:14,0:15:41.95:0,42,484	0/0:28,0:28:64.17:0,64,834	0/0:16,0:17:50.97:0,51,584	0/0:15,0:15:39.11:0,39,470	0/0:18,0:18:45.14:0,45,557	0/0:28,0:29:49.01:0,49,690	0/0:21,0:22:54.86:0,55,616	0/0:13,0:13:39.11:0,39,469	0/0:67,0:68:99:0,180,2174	0/0:14,0:15:44.94:0,45,507	0/0:10,0:10:27.08:0,27,334	0/0:26,0:27:69.05:0,69,831	0/0:26,0:26:72.23:0,72,892	0/0:26,0:29:57.77:0,58,895	0/0:26,0:27:81.09:0,81,980	0/0:6,0:8:20.90:0,21,237
chr10	74639987	.	AG	A	6122.33	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=12.439;DP=558;FS=25.789;HRun=4;HaplotypeScore=55.7015;InbreedingCoeff=0.9915;MQ=61.63;MQ0=3;MQRankSum=1.007;QD=29.43;ReadPosRankSum=2.570;VQSLOD=2.9766;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:93.31:0,93,1299	0/0:5,0:5:15.05:0,15,209	0/0:10,0:8:13.29:0,13,166	0/0:6,0:5:14.54:0,15,177	0/0:22,0:22:60.20:0,60,832	0/0:19,0:19:54.18:0,54,754	0/0:15,0:15:42.14:0,42,588	0/0:26,0:25:72.20:0,72,969	1/1:2,16:18:39.08:452,39,0	1/1:2,23:25:69.20:816,69,0	1/1:4,15:18:42.07:478,42,0	1/1:3,16:18:48.11:560,48,0	1/1:0,15:15:39.12:467,39,0	0/0:16,0:16:42.10:0,42,565	0/0:19,0:19:57.18:0,57,782	1/1:1,14:15:39.12:468,39,0	0/0:31,0:30:81.26:0,81,1116	0/0:20,0:20:54.10:0,54,714	0/0:18,0:18:54.16:0,54,731	0/0:24,0:24:65.93:0,66,822	0/0:26,0:26:78.26:0,78,1090	1/1:1,25:26:75.15:866,75,0	1/1:0,24:24:63.03:718,63,0	1/1:3,28:30:53.63:794,54,0	1/1:2,14:16:42.13:504,42,0	0/0:22,0:22:60.18:0,60,808	0/0:23,0:23:66.17:0,66,850	0/0:13,0:13:39.13:0,39,543
chr10	74640070	.	A	AG	6132.09	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-8.286;DP=605;FS=2.366;HRun=0;HaplotypeScore=68.7994;InbreedingCoeff=0.9318;MQ=58.56;MQ0=10;MQRankSum=3.011;QD=28.65;ReadPosRankSum=4.171;VQSLOD=5.4009;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:17.84:0,18,345	0/0:12,0:12:33.03:0,33,388	0/0:17,0:8:17.86:0,18,177	0/1:21,0:10:7.80:8,0,10	0/0:34,0:33:80.30:0,80,887	0/0:16,0:16:44.13:0,44,515	0/0:25,0:25:61.20:0,61,610	0/0:30,0:30:69.46:0,69,766	1/1:4,14:18:42.07:498,42,0	1/1:6,11:17:48.10:562,48,0	1/1:1,22:23:68.88:781,69,0	1/1:4,9:12:33.08:396,33,0	1/1:3,11:14:36.17:471,36,0	0/0:11,0:11:27.02:0,27,320	0/0:18,0:18:54.11:0,54,684	1/1:4,7:11:33.07:384,33,0	0/0:41,0:41:99:0,110,1449	0/0:24,0:23:31.57:0,32,504	0/0:19,0:19:47.09:0,47,505	0/0:20,0:19:50.66:0,51,591	0/0:11,0:11:28.56:0,29,308	1/1:6,18:24:54.83:685,55,0	1/1:5,20:25:71.94:862,72,0	1/1:8,20:27:78.15:931,78,0	1/1:1,18:20:44.98:555,45,0	0/0:33,0:32:63.56:0,64,952	0/0:32,0:31:84.02:0,84,932	0/0:7,0:5:11.60:0,12,144
chr10	74640534	.	CA	C	5313.35	PASS	AB=0.720;AC=22;AF=0.393;AN=56;BaseQRankSum=11.942;DP=583;FS=0.675;HRun=10;HaplotypeScore=61.1254;InbreedingCoeff=0.8416;MQ=79.94;MQ0=0;MQRankSum=-1.020;QD=19.90;ReadPosRankSum=4.962;VQSLOD=5.4045;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,29:34:77.98:677,78,0	0/0:13,0:13:30.08:0,30,332	0/0:18,0:18:44.29:0,44,441	0/0:10,0:10:14.97:0,15,249	0/0:25,0:25:66.18:0,66,730	0/0:21,0:21:63.17:0,63,697	0/0:21,0:21:55.44:0,55,657	0/0:34,0:36:95.92:0,96,1017	1/1:2,22:24:59.98:521,60,0	1/1:4,23:27:65.97:573,66,0	1/1:1,19:20:56.99:495,57,0	0/1:3,15:18:24.39:270,0,24	1/1:1,16:17:47.99:417,48,0	0/0:13,1:14:7.01:0,7,288	0/0:18,0:18:39.07:0,39,419	1/1:1,22:23:62.98:547,63,0	0/0:20,0:20:54.11:0,54,584	0/0:11,0:11:27.07:0,27,298	0/0:21,1:22:25.02:0,25,476	0/0:38,0:38:99:0,102,1128	0/1:15,2:17:10:10,0,354	1/1:5,20:25:50.98:442,51,0	1/1:1,12:13:29.99:260,30,0	1/1:3,15:19:24.67:371,25,0	1/1:1,29:30:83.98:729,84,0	0/0:19,0:19:48.09:0,48,511	0/0:18,1:19:22.07:0,22,472	0/0:11,0:11:33.09:0,33,365
chr10	74640630	.	ATGTGTGTGTGTGTG	A	34.73	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=1.556;DP=601;FS=0.000;HRun=0;HaplotypeScore=213.4523;InbreedingCoeff=0.4495;MQ=65.50;MQ0=11;MQRankSum=-1.604;QD=1.20;ReadPosRankSum=1.317;VQSLOD=2.3982;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,15:29:3.01:112,3,0	0/0:3,0:3:9.03:0,9,555	./.	0/0:22,0:15:6.02:0,6,108	0/0:15,0:18:33.10:0,33,1472	0/0:16,0:19:27.07:0,27,1556	0/0:20,0:20:12.50:0,12,556	0/0:22,0:22:9.01:0,9,204	0/0:17,0:19:26.99:0,27,645	0/0:25,0:24:27.05:0,27,767	0/0:11,0:12:18.53:0,19,717	0/0:17,0:18:27.08:0,27,644	0/0:13,0:12:9.03:0,9,239	0/0:15,0:14:9.50:0,10,445	0/0:25,0:25:34.47:0,34,1335	0/0:13,0:17:27.08:0,27,878	0/0:40,0:41:75.71:0,76,4101	0/0:24,0:22:45.15:0,45,2110	0/0:23,0:23:23.10:0,23,1081	0/0:23,0:23:18.06:0,18,917	0/0:43,0:44:69.24:0,69,3735	0/0:9,0:11:3.01:0,3,102	0/0:23,0:28:32.73:0,33,918	0/0:18,0:20:20.64:0,21,509	0/0:10,0:11:18.06:0,18,555	0/0:26,0:26:18.06:0,18,712	0/0:24,0:27:27.09:0,27,1294	0/0:20,0:18:18.06:0,18,919
chr10	74641032	.	G	GAC	965.50	PASS	AB=0.569;AC=1;AF=0.018;AN=56;BaseQRankSum=-6.418;DP=643;FS=20.099;HRun=0;HaplotypeScore=88.3946;InbreedingCoeff=-0.0171;MQ=79.32;MQ0=1;MQRankSum=-2.547;QD=26.09;ReadPosRankSum=1.966;VQSLOD=2.5753;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,28:37:31.72:1040,0,32	0/0:12,0:12:30.09:0,30,367	0/0:35,0:33:47.14:0,47,512	0/0:40,0:36:58.61:0,59,649	0/0:22,0:22:57.18:0,57,696	0/0:23,0:22:60.17:0,60,720	0/0:25,0:26:63.03:0,63,747	0/0:27,0:28:59.80:0,60,661	0/0:28,1:29:20.90:0,21,746	0/0:26,0:26:54.12:0,54,631	0/0:14,0:15:38.95:0,39,453	0/0:17,0:17:33.10:0,33,403	0/0:17,0:17:32.88:0,33,387	0/0:25,0:25:54.14:0,54,633	0/0:21,0:21:48.15:0,48,587	0/0:17,0:17:39.12:0,39,477	0/0:25,0:26:72.06:0,72,857	0/0:20,0:20:47.74:0,48,558	0/0:17,0:19:44.80:0,45,504	0/0:17,0:18:44.97:0,45,526	0/0:43,0:44:99:0,105,1259	0/0:13,0:13:33.10:0,33,403	0/0:16,0:17:50.99:0,51,600	0/0:27,0:27:54.17:0,54,660	0/0:13,0:13:32.69:0,33,375	0/0:23,0:23:54.13:0,54,643	0/0:20,0:20:39.12:0,39,476	0/0:12,0:12:30.09:0,30,366
chr10	74641078	.	G	GACAC	2673.56	PASS	AB=0.937;AC=25;AF=0.481;AN=52;BaseQRankSum=-4.231;DP=651;FS=11.055;HRun=0;HaplotypeScore=128.2087;InbreedingCoeff=0.3992;MQ=57.51;MQ0=20;MQRankSum=-0.075;QD=7.21;ReadPosRankSum=0.336;VQSLOD=2.2475;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,5:41:8.52:632,0,9	0/1:8,0:8:17.95:18,0,41	./.	./.	0/0:23,0:28:25.85:0,26,306	0/0:25,0:24:13.18:0,13,336	0/0:20,0:19:18.49:0,18,218	0/0:31,0:31:7.75:0,8,111	1/1:14,5:22:5.75:83,6,0	1/1:15,8:25:18.35:296,18,0	1/1:11,5:19:5.29:81,5,0	1/1:13,6:17:11.53:220,12,0	1/1:5,8:16:8.88:208,9,0	0/0:13,0:16:16.84:0,17,196	0/1:22,0:23:11.14:11,0,217	1/1:8,5:13:9.03:212,9,0	0/0:25,0:28:14.67:0,15,369	0/0:18,0:18:1.96:0,2,125	0/0:22,0:22:8.95:0,9,84	0/0:16,0:16:14.80:0,15,203	0/1:48,0:46:12.25:12,0,316	1/1:9,14:26:10.83:223,11,0	0/1:10,2:16:9.58:159,0,10	1/1:19,12:33:23.88:565,24,0	1/1:15,0:15:8.98:125,9,0	0/1:28,0:27:5.72:6,0,325	0/1:15,0:17:1.94:2,0,198	0/0:14,0:14:17.84:0,18,195
chr10	74642826	.	C	CA	157.91	PASS	AB=0.991;AC=17;AF=0.315;AN=54;BaseQRankSum=1.489;DP=377;FS=1.040;HRun=0;HaplotypeScore=109.4517;InbreedingCoeff=0.1933;MQ=41.73;MQ0=19;MQRankSum=1.149;QD=0.88;ReadPosRankSum=-5.197;VQSLOD=0.3916;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:34:2.17:0,2,28	0/1:1,0:1:0:0,0,0	./.	0/0:2,0:2:2.37:0,2,8	0/1:20,1:21:2.58:45,0,3	1/1:12,1:12:0.35:16,0,0	0/0:17,0:13:7.02:0,7,21	0/1:27,1:26:4.33:18,0,4	0/1:12,0:11:2.88:6,0,3	0/0:18,0:16:1.13:0,1,3	0/0:12,0:11:0.54:0,1,8	1/1:8,0:6:7.23:45,7,0	0/0:16,0:15:0.50:0,0,14	0/0:10,0:9:7.24:0,7,16	0/1:10,0:9:2.80:17,0,3	0/0:7,0:6:3.64:0,4,8	0/0:19,0:18:7.37:0,7,17	0/0:13,0:12:4.63:0,5,13	1/1:9,2:8:6.79:32,7,0	0/0:16,0:15:1.91:0,2,6	0/0:12,0:12:5.34:0,5,14	0/0:8,0:6:1.87:0,2,5	0/1:11,0:10:1.36:19,0,1	0/1:12,0:10:0.49:0,0,3	0/0:9,0:9:0.08:0,0,15	1/1:13,0:12:6.17:40,6,0	0/1:21,0:18:7.13:30,0,7	0/1:18,0:17:3.73:15,0,4
chr10	74642964	.	AT	A	2431.55	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=2.370;DP=363;FS=1.476;HRun=10;HaplotypeScore=53.3632;InbreedingCoeff=0.9282;MQ=70.56;MQ0=0;MQRankSum=-0.062;QD=16.21;ReadPosRankSum=-0.215;VQSLOD=3.7246;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:23:47.89:402,48,0	0/0:3,0:2:6.02:0,6,66	0/0:8,0:8:9.08:0,9,112	0/0:10,0:10:2.40:0,2,82	0/0:14,0:14:35.40:0,35,351	0/0:24,0:24:60.16:0,60,661	0/0:15,0:15:36.93:0,37,379	1/1:5,14:20:40.93:329,41,0	1/1:1,13:14:29.99:260,30,0	1/1:1,8:9:23.98:205,24,0	1/1:1,5:6:11.99:104,12,0	1/1:4,6:10:11.99:104,12,0	1/1:0,8:8:21:182,21,0	0/0:17,0:17:45.01:0,45,469	0/0:18,0:18:51.10:0,51,543	1/1:2,8:10:17.99:156,18,0	0/0:24,0:24:60.96:0,61,638	1/1:1,13:13:23.99:208,24,0	0/0:14,0:14:33.08:0,33,358	0/0:12,0:12:36.10:0,36,397	0/0:17,0:17:39.07:0,39,418	1/1:0,3:3:9:78,9,0	1/1:0,6:6:18:156,18,0	1/1:2,13:15:35.99:313,36,0	1/1:3,8:11:17.97:156,18,0	0/0:15,0:15:45.11:0,45,489	0/0:17,0:17:45.06:0,45,473	0/0:5,0:5:14.97:0,15,150
chr10	74643104	.	C	CAAAT	1437.41	PASS	AC=18;AF=0.346;AN=52;BaseQRankSum=1.891;DP=370;FS=0.000;HRun=0;HaplotypeScore=61.8984;InbreedingCoeff=0.7990;MQ=61.44;MQ0=1;MQRankSum=-0.749;QD=15.97;ReadPosRankSum=1.743;VQSLOD=3.0333;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,21:32:42.14:970,42,0	0/0:1,0:1:3.01:0,3,49	0/0:24,0:11:9.03:0,9,129	0/0:12,0:5:6.01:0,6,74	0/0:15,0:15:27.07:0,27,362	0/0:20,0:20:51.17:0,51,824	0/0:14,0:14:24.05:0,24,340	0/0:40,0:40:69.19:0,69,1002	1/1:7,0:7:11.97:172,12,0	./.	1/1:7,0:7:6.48:61,6,0	1/1:8,0:8:6.02:84,6,0	1/1:8,0:8:5.03:37,5,0	0/0:12,0:12:27.09:0,27,439	0/0:20,0:20:30.10:0,30,488	1/1:6,0:11:9.03:143,9,0	0/0:21,0:21:48.11:0,48,708	0/0:12,0:12:32.79:0,33,466	0/0:18,0:17:30.09:0,30,433	0/0:15,0:15:36.06:0,36,500	0/0:13,0:13:33.06:0,33,473	./.	1/1:6,0:6:3:25,3,0	1/1:4,0:4:3.48:37,3,0	1/1:6,0:7:6.02:88,6,0	0/0:15,0:15:30.10:0,30,464	0/0:13,0:13:36.02:0,36,515	0/0:7,0:7:21.07:0,21,344
chr10	74643317	.	AAG	A	357.02	PASS	AB=0.848;AC=16;AF=0.296;AN=54;BaseQRankSum=6.104;DP=205;FS=2.556;HRun=0;HaplotypeScore=40.9148;InbreedingCoeff=-0.4565;MQ=72.70;MQ0=0;MQRankSum=-5.285;QD=3.00;ReadPosRankSum=-2.023;VQSLOD=0.9660;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:37.75:0,38,710	0/0:3,0:2:6.02:0,6,94	0/0:10,0:6:6.02:0,6,112	0/1:17,0:10:20.31:20,0,130	0/0:7,0:8:6.02:0,6,112	0/1:9,1:10:7.36:7,0,440	0/1:8,2:10:20.60:21,0,400	0/1:6,3:10:55.20:55,0,73	0/1:3,1:4:47.03:53,0,47	0/1:1,2:3:47.04:63,0,47	0/0:1,0:1:3.01:0,3,56	0/1:6,2:8:60.23:60,0,311	0/1:3,1:4:30.34:30,0,155	0/1:3,1:4:8.82:9,0,156	0/1:8,1:9:10.61:11,0,362	0/1:5,0:5:42.34:42,0,100	0/1:7,0:7:29.03:29,0,100	0/0:3,0:3:6.02:0,6,112	0/1:5,0:7:13.91:14,0,270	0/1:5,3:8:8.44:8,0,103	0/0:11,0:12:17.98:0,18,314	0/0:2,0:2:6.02:0,6,106	0/0:3,0:3:9.03:0,9,168	0/0:18,0:17:30.10:0,30,559	0/1:4,1:6:23.18:23,0,204	0/0:9,0:9:24.08:0,24,448	0/1:4,2:6:59.04:59,0,206	./.
chr10	74644988	.	TAC	T	5409.82	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.104;DP=1154;FS=2.817;HRun=0;HaplotypeScore=226.9749;InbreedingCoeff=0.9968;MQ=58.28;MQ0=3;MQRankSum=-8.558;QD=22.54;ReadPosRankSum=2.002;VQSLOD=4.9866;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:72,0:72:99:0,159,2558	0/0:16,0:16:39.10:0,39,604	0/0:54,0:42:55.88:0,56,1102	0/0:52,0:33:63.97:0,64,950	0/0:27,0:27:63.22:0,63,1063	0/0:24,0:24:54.12:0,54,877	0/0:33,0:33:90.28:0,90,1455	0/0:62,0:62:99:0,135,2206	1/1:12,36:47:99:1338,108,0	0/0:53,0:53:99:0,150,2354	0/0:18,0:18:51.17:0,51,859	1/1:13,28:40:72.25:867,72,0	1/1:12,34:45:99:1268,102,0	0/0:50,1:51:99:0,144,2336	0/0:60,0:60:99:0,166,2708	0/0:61,0:61:99:0,175,2827	0/0:29,0:29:72.66:0,73,1218	0/0:30,0:30:77.75:0,78,1275	0/0:25,0:25:69.24:0,69,1150	0/0:35,0:35:94.52:0,95,1515	0/0:104,0:104:99:0,266,4333	1/1:18,21:39:69.63:819,70,0	1/1:6,18:24:45.14:570,45,0	1/1:18,24:39:44.95:547,45,0	0/0:20,0:20:54.18:0,54,907	0/0:50,0:50:99:0,135,2170	0/0:33,0:33:81.26:0,81,1334	0/0:5,0:5:15.05:0,15,255
chr10	74645006	.	AAC	A	3114.72	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=19.488;DP=1170;FS=4.956;HRun=0;HaplotypeScore=242.3408;InbreedingCoeff=0.9839;MQ=59.75;MQ0=3;MQRankSum=-12.126;QD=10.21;ReadPosRankSum=-1.557;VQSLOD=3.0003;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,58:65:99:1807,141,0	0/0:12,0:12:36.12:0,36,604	0/0:46,0:38:48.79:0,49,1023	0/0:48,0:36:79.15:0,79,1117	0/0:27,0:27:81.28:0,81,1344	0/0:29,0:29:81.24:0,81,1276	0/0:32,0:32:84.29:0,84,1410	0/0:62,0:62:99:0,144,2351	1/1:51,1:52:14.40:301,14,0	0/0:58,0:58:99:0,150,2424	0/0:16,0:16:39.13:0,39,652	1/1:39,0:40:47.90:337,48,0	1/1:45,0:44:44.32:252,44,0	0/0:55,0:55:99:0,132,2379	0/0:65,0:65:99:0,189,2952	0/0:59,0:59:99:0,160,2641	0/0:31,0:31:72.25:0,72,1204	0/0:36,0:36:87.21:0,87,1371	0/0:29,0:28:29.33:0,29,1004	0/0:34,0:34:79.15:0,79,1310	0/0:114,0:113:99:0,310,5118	1/1:36,0:36:31.18:270,31,0	1/1:29,0:29:19.82:143,20,0	1/1:37,0:34:24.41:202,24,0	0/0:21,1:22:21.58:0,22,893	0/0:48,0:48:99:0,129,2144	0/0:34,0:34:99:0,99,1575	0/0:5,0:5:9.03:0,9,150
chr10	74645018	.	CTCACACAT	C	12754.88	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=18.542;DP=1194;FS=5.355;HRun=0;HaplotypeScore=342.0835;InbreedingCoeff=0.9984;MQ=57.91;MQ0=2;MQRankSum=-17.142;QD=51.64;ReadPosRankSum=-4.060;VQSLOD=3.3835;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:90.36:0,90,1733	0/0:14,0:14:42.14:0,42,1659	0/0:45,0:40:99:0,107,3341	0/0:45,0:36:96.44:0,96,3161	0/0:30,0:30:87.30:0,87,3570	0/0:32,0:32:61.32:0,61,3238	0/0:40,0:40:99:0,117,3873	0/0:55,0:55:99:0,166,5699	1/1:4,49:53:99:2863,114,0	0/0:55,0:55:99:0,166,6274	0/0:17,0:17:51.16:0,51,1917	1/1:14,27:41:99:2527,114,0	1/1:1,45:47:99:2746,99,0	0/0:52,1:53:86.14:0,86,6455	0/0:73,0:73:99:0,217,8283	0/0:59,0:59:99:0,128,7083	0/0:34,0:34:93.28:0,93,3336	0/0:38,0:38:98.53:0,99,3715	0/0:27,0:26:74.83:0,75,2746	0/0:33,0:33:94.57:0,95,3595	0/0:117,0:116:99:0,334,13645	1/1:3,37:40:89.89:1965,90,0	1/1:1,31:32:54.66:1244,55,0	1/1:12,21:33:63.13:1409,63,0	0/0:24,0:24:69.22:0,69,2695	0/0:53,0:53:99:0,160,6190	0/0:34,0:33:99:0,99,4269	0/0:6,0:6:18.06:0,18,511
chr10	74645140	.	CACAG	C	8571.60	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=17.755;DP=1332;FS=2.536;HRun=0;HaplotypeScore=251.5444;InbreedingCoeff=0.9999;MQ=70.37;MQ0=11;MQRankSum=-3.958;QD=31.17;ReadPosRankSum=5.773;VQSLOD=4.6804;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,141,3278	0/0:13,0:13:36.11:0,36,882	0/0:77,0:47:80.13:0,80,1561	0/0:93,0:64:32.27:0,32,1646	0/0:47,0:47:99:0,126,3073	0/0:27,0:27:65.49:0,65,1636	0/0:34,0:34:74.57:0,75,1489	0/0:54,0:53:99:0,114,2961	1/1:6,45:50:78.27:1395,78,0	0/0:65,0:65:99:0,167,3712	0/0:31,0:31:87.27:0,87,2133	1/1:2,42:43:75.14:1307,75,0	1/1:3,40:42:99:1750,99,0	0/0:44,0:44:99:0,126,2918	0/0:69,0:69:99:0,178,4325	0/0:71,0:71:99:0,205,4979	0/0:43,0:43:99:0,123,3055	0/0:32,0:32:77.11:0,77,1845	0/0:29,0:29:81.21:0,81,1660	0/0:34,0:34:87.27:0,87,2123	0/0:93,0:93:99:0,213,4886	1/1:2,33:35:66.23:1184,66,0	1/1:3,35:39:72.13:1292,72,0	1/1:9,54:61:93.32:1644,93,0	0/0:29,0:29:68.44:0,68,1756	0/0:46,0:46:99:0,123,2948	0/0:40,0:40:99:0,111,2461	0/0:29,0:29:87.20:0,87,1978
chr10	74645279	.	TCACA	T	2984.93	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.102;DP=984;FS=2.867;HRun=0;HaplotypeScore=192.2234;InbreedingCoeff=0.9518;MQ=61.81;MQ0=20;MQRankSum=0.225;QD=26.42;ReadPosRankSum=1.549;VQSLOD=3.6994;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,105,2400	0/0:11,0:11:27.07:0,27,545	0/0:84,0:25:48.06:0,48,930	0/0:95,0:45:3.38:0,3,903	0/0:24,0:26:65.99:0,66,1412	0/0:23,0:23:62.80:0,63,1423	0/0:34,0:35:81.70:0,82,1786	0/0:38,0:37:83.96:0,84,1718	0/0:30,0:30:66.17:0,66,1503	1/1:9,37:47:99:1608,103,0	1/1:6,12:18:18.06:309,18,0	0/0:27,0:27:69.24:0,69,1689	0/0:21,0:21:45.15:0,45,1102	0/0:21,0:21:57.20:0,57,1392	0/0:38,0:39:87.07:0,87,2018	1/1:5,26:31:45.01:772,45,0	0/0:43,0:43:87.66:0,88,2001	0/0:26,0:26:63.64:0,64,1407	0/0:22,0:21:53.80:0,54,1141	0/0:32,0:32:75.24:0,75,1754	0/0:65,0:65:99:0,156,3697	0/0:27,0:27:45.15:0,45,1103	0/0:23,0:23:39.13:0,39,955	0/0:32,0:33:72.02:0,72,1627	1/1:2,15:17:21:455,21,0	0/0:37,0:36:93.29:0,93,2053	0/0:40,0:41:99:0,117,2707	0/0:24,0:24:66.23:0,66,1660
chr10	74645459	.	A	AT	1850.09	PASS	AB=0.866;AC=29;AF=0.518;AN=56;BaseQRankSum=0.824;DP=593;FS=1.367;HRun=14;HaplotypeScore=82.9906;InbreedingCoeff=0.2897;MQ=69.60;MQ0=2;MQRankSum=-2.139;QD=4.25;ReadPosRankSum=-2.884;VQSLOD=0.9614;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:30:20.36:100,20,0	0/0:10,0:10:20.62:0,21,134	0/0:17,1:13:9.64:0,10,49	0/0:13,0:12:5.95:0,6,49	0/1:35,3:41:10.95:11,0,294	0/1:20,3:23:11.40:11,0,189	0/1:22,1:24:6.82:7,0,178	0/1:27,2:30:66.50:67,0,182	1/1:5,0:13:19.89:100,20,0	0/1:12,17:29:14.48:322,0,14	1/1:6,17:23:27.54:316,28,0	1/1:10,0:13:4.80:77,5,0	1/1:6,1:13:14.22:80,14,0	0/0:17,0:18:43.19:0,43,265	0/0:18,1:19:20.91:0,21,261	1/1:3,15:17:21:185,21,0	0/1:14,3:23:25.37:25,0,192	0/1:18,3:20:57.75:58,0,151	0/0:17,0:18:28.51:0,29,176	0/1:16,5:22:67.89:68,0,120	0/0:9,0:9:17.67:0,18,114	1/1:5,1:22:37.73:198,38,0	1/1:10,0:19:9.98:44,10,0	1/1:3,0:13:14.20:71,14,0	1/1:9,19:28:0.71:252,1,0	0/1:21,4:29:52.04:52,0,195	0/0:22,1:24:12.07:0,12,180	0/0:23,0:27:70.21:0,70,427
chr10	74645776	.	T	TG	2329.94	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-1.668;DP=542;FS=17.870;HRun=5;HaplotypeScore=78.8250;InbreedingCoeff=0.9959;MQ=86.68;MQ0=0;MQRankSum=0.326;QD=30.26;ReadPosRankSum=0.364;VQSLOD=2.0244;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,99,1059	0/0:7,0:7:18.03:0,18,193	0/0:22,0:22:33.16:0,33,520	0/0:18,0:18:44.72:0,45,413	0/0:26,0:26:72.18:0,72,774	0/0:20,0:20:48.12:0,48,515	0/0:21,0:21:51.12:0,51,547	0/0:25,0:25:60.13:0,60,632	0/0:11,0:11:27.06:0,27,290	1/1:4,12:16:39.11:486,39,0	1/1:1,16:17:41.79:552,42,0	0/0:19,0:19:48.10:0,48,508	0/0:16,0:16:48.12:0,48,516	0/0:17,0:17:42.11:0,42,451	0/0:15,0:15:45.10:0,45,475	1/1:2,22:24:69.22:900,69,0	0/0:19,0:19:44.88:0,45,473	0/0:19,0:19:57.14:0,57,610	0/0:24,0:24:63.14:0,63,664	0/0:16,0:16:42.10:0,42,451	0/0:28,0:28:66.16:0,66,708	0/0:20,0:20:57.13:0,57,605	0/0:17,0:17:39.10:0,39,419	0/0:19,0:18:45.11:0,45,482	1/1:3,17:20:42.13:553,42,0	0/0:21,1:22:20.64:0,21,550	0/0:14,0:14:42.11:0,42,451	0/0:12,0:12:30.07:0,30,322
chr10	74646622	.	AGCAGAG	A	3177.20	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=9.722;DP=553;FS=8.418;HRun=0;HaplotypeScore=112.6199;InbreedingCoeff=0.8819;MQ=59.04;MQ0=8;MQRankSum=-8.791;QD=15.06;ReadPosRankSum=2.930;VQSLOD=2.1979;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,10:29:6.02:127,6,0	0/0:8,0:8:15.05:0,15,477	0/0:28,0:15:12.04:0,12,317	0/0:16,0:8:14.88:0,15,293	0/0:22,0:22:30.10:0,30,824	0/0:13,0:13:18.06:0,18,587	0/1:16,0:16:5.57:6,0,818	0/0:32,0:32:66.22:0,66,1915	1/1:5,10:15:21.07:443,21,0	1/1:8,9:17:27.06:470,27,0	1/1:15,7:22:6.02:127,6,0	1/1:11,7:18:12.04:253,12,0	1/1:10,5:15:21.05:369,21,0	0/0:12,0:12:27.09:0,27,811	0/0:13,0:13:21.07:0,21,665	1/1:2,7:9:18.06:380,18,0	0/0:35,0:35:81.25:0,81,2572	0/0:31,0:31:72.25:0,72,2262	0/0:16,0:16:27.02:0,27,726	0/0:20,0:20:36.12:0,36,1114	0/0:42,0:42:94.20:0,94,2953	1/1:14,0:14:14.90:149,15,0	1/1:10,20:30:21.77:445,22,0	1/1:4,9:13:9.03:182,9,0	1/1:1,12:13:21.07:443,21,0	0/0:23,0:23:48.16:0,48,1365	0/0:20,0:20:42.13:0,42,1235	0/0:11,0:11:24.08:0,24,790
chr10	74647981	.	AGTGTGTGTGTGTGTGTGTGT	A	2089.10	PASS	AB=0.824;AC=11;AF=0.204;AN=54;BaseQRankSum=5.913;DP=626;FS=25.391;HRun=0;HaplotypeScore=288.5160;InbreedingCoeff=0.7108;MQ=68.09;MQ0=11;MQRankSum=-5.921;QD=15.14;ReadPosRankSum=-0.407;VQSLOD=1.1163;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:48.16:0,48,1659	0/0:11,0:11:9.03:0,9,479	./.	0/0:41,0:27:6.02:0,6,85	0/0:11,0:11:9.03:0,9,343	0/0:17,0:17:22.84:0,23,1342	0/0:34,0:35:37.37:0,37,1581	0/0:25,0:24:35.71:0,36,921	1/1:13,7:20:18.06:954,18,0	0/0:16,0:17:27.09:0,27,857	0/0:8,0:11:12.04:0,12,406	1/1:18,6:24:6.02:300,6,0	1/1:19,5:24:8.71:458,9,0	0/0:20,0:20:33.11:0,33,1703	0/0:24,0:26:51.17:0,51,2493	0/0:18,0:21:36.12:0,36,1266	0/0:25,0:25:33.58:0,34,2002	0/0:23,0:23:42.62:0,43,2918	0/0:25,0:23:25.63:0,26,758	0/0:13,0:14:15.05:0,15,826	0/0:44,0:43:43.94:0,44,1593	1/1:11,5:15:6.02:319,6,0	0/1:11,3:14:18.83:132,0,19	1/1:33,6:39:3.78:80,4,0	0/0:16,0:18:27.54:0,28,779	0/0:18,0:18:27.09:0,27,1529	0/0:4,0:4:9.03:0,9,598	0/0:3,0:5:12.04:0,12,594
chr10	74649398	.	TTTG	T	8378.35	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.613;DP=497;FS=4.708;HRun=0;HaplotypeScore=71.2625;InbreedingCoeff=0.9964;MQ=66.14;MQ0=0;MQRankSum=-4.354;QD=45.04;ReadPosRankSum=4.552;VQSLOD=6.1849;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:60.21:999,60,0	0/0:8,0:8:24.08:0,24,544	0/0:19,0:18:51.18:0,51,1115	0/0:13,0:13:33.11:0,33,740	0/0:31,0:31:93.28:0,93,2008	0/0:21,0:21:63.22:0,63,1428	0/0:8,0:8:24.07:0,24,501	0/0:31,0:30:93.32:0,93,2082	1/1:0,21:21:57.19:948,57,0	1/1:1,19:20:60.21:996,60,0	1/1:0,19:19:51.17:835,51,0	1/1:1,17:18:45.14:722,45,0	1/1:2,13:15:36.12:600,36,0	0/0:20,0:20:60.21:0,60,1348	0/0:12,0:12:36.12:0,36,816	1/1:0,10:10:27.09:449,27,0	0/0:24,0:24:66.23:0,66,1496	0/0:21,0:21:60.21:0,60,1348	0/0:17,0:17:48.16:0,48,1088	0/0:19,0:19:57.20:0,57,1291	0/0:12,0:12:36.11:0,36,774	1/1:0,6:6:18.06:298,18,0	1/1:0,17:17:48.08:766,48,0	1/1:0,14:14:42.14:699,42,0	1/1:0,24:24:66.14:1066,66,0	0/0:23,1:24:22.26:0,22,1497	0/0:25,0:23:75.26:0,75,1663	0/0:6,0:6:18.06:0,18,407
chr10	74649524	.	A	AT	4879.94	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-13.610;DP=499;FS=2.707;HRun=8;HaplotypeScore=50.6982;InbreedingCoeff=0.9897;MQ=70.81;MQ0=0;MQRankSum=-0.677;QD=27.57;ReadPosRankSum=-0.949;VQSLOD=5.0555;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:34:99:1107,99,0	0/0:6,0:6:18.01:0,18,165	0/0:10,0:10:20.19:0,20,177	0/0:10,0:10:14.22:0,14,118	0/0:28,0:27:78.04:0,78,714	0/0:20,0:20:60.03:0,60,549	0/0:11,0:11:30.02:0,30,274	1/1:6,25:31:75.22:865,75,0	1/1:0,12:12:33.10:381,33,0	0/0:19,0:19:51.02:0,51,467	0/0:22,0:22:60.02:0,60,545	1/1:1,11:12:30.09:346,30,0	1/1:1,18:19:51.15:589,51,0	0/0:14,0:14:42.02:0,42,384	0/0:14,0:14:36.01:0,36,329	0/0:15,0:15:45.02:0,45,412	0/0:18,0:18:42.01:0,42,384	1/1:2,22:24:60.18:692,60,0	0/0:13,0:13:32.99:0,33,296	0/0:19,0:19:51.02:0,51,464	0/0:11,0:11:33.02:0,33,302	1/1:0,5:5:12.04:139,12,0	1/1:8,16:24:39.12:450,39,0	1/1:1,15:16:27.08:312,27,0	0/0:21,0:21:60.03:0,60,549	0/0:30,0:30:81.03:0,81,738	0/0:22,0:22:60.01:0,60,544	0/0:19,0:19:51.03:0,51,466
chr10	74651022	.	CAGAGAG	C	1704.49	PASS	AB=0.659;AC=15;AF=0.268;AN=56;BaseQRankSum=5.350;DP=737;FS=10.035;HRun=0;HaplotypeScore=164.9001;InbreedingCoeff=0.8410;MQ=70.76;MQ0=27;MQRankSum=-4.920;QD=8.19;ReadPosRankSum=-2.396;VQSLOD=1.5776;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,27:39:6.02:127,6,0	0/0:12,0:13:26.05:0,26,774	0/0:36,0:26:8.90:0,9,156	0/0:36,0:24:18.03:0,18,264	0/0:30,0:33:58.95:0,59,1614	0/0:19,0:20:39.13:0,39,1099	0/0:21,0:21:39.30:0,39,1162	0/1:13,0:23:30.72:54,0,31	1/1:4,15:17:18.06:381,18,0	0/0:28,0:28:55.92:0,56,768	0/0:20,0:20:33.21:0,33,413	1/1:6,16:20:26.83:476,27,0	1/1:6,15:21:11.50:410,12,0	0/0:20,0:22:31.20:0,31,1344	0/0:17,0:18:27.08:0,27,668	0/0:33,0:33:47.64:0,48,544	0/0:32,0:36:79.06:0,79,1859	0/0:10,0:20:27.09:0,27,401	0/0:18,0:17:24.08:0,24,547	0/0:30,0:33:43.79:0,44,1140	0/0:35,0:36:87.26:0,87,2275	1/1:8,9:16:11.59:153,12,0	1/1:11,13:25:9.16:91,9,0	1/1:8,20:27:11.54:201,12,0	0/0:19,0:19:35.02:0,35,343	0/0:31,0:33:73.64:0,74,1826	0/0:41,0:43:90.31:0,90,2491	0/0:4,0:4:12.04:0,12,308
chr10	74651042	.	G	GACAGAC	785.90	PASS	AB=0.870;AC=4;AF=0.071;AN=56;BaseQRankSum=5.827;DP=702;FS=5.171;HRun=0;HaplotypeScore=164.6974;InbreedingCoeff=-0.0815;MQ=54.96;MQ0=28;MQRankSum=-5.145;QD=7.94;ReadPosRankSum=-0.269;VQSLOD=2.1722;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:9.03:0,9,136	0/0:18,0:18:41.08:0,41,831	0/0:25,0:12:29.49:0,29,345	0/0:31,0:20:45.07:0,45,702	0/0:32,0:31:77.94:0,78,1622	0/0:15,0:15:42.13:0,42,959	0/0:21,0:21:53.96:0,54,1116	0/0:35,0:31:70.39:0,70,825	0/0:18,0:17:14.66:0,15,269	0/1:30,0:31:99:313,0,539	0/1:18,0:20:55.55:56,0,259	0/0:21,0:20:32.70:0,33,387	0/0:19,0:19:29.67:0,30,375	0/0:23,0:23:65.02:0,65,1394	0/0:13,0:13:36.10:0,36,683	0/1:23,2:25:99:294,0,295	0/0:38,0:38:99:0,102,2032	0/0:20,0:17:36.06:0,36,520	0/0:15,0:14:36.10:0,36,686	0/0:30,0:29:68.75:0,69,1211	0/0:42,0:40:99:0,108,2273	0/0:13,0:13:14.45:0,14,158	0/0:22,0:22:22.68:0,23,280	0/0:26,0:26:26.55:0,27,283	0/1:12,9:23:99:233,0,283	0/0:30,0:30:87.23:0,87,1762	0/0:39,0:39:99:0,102,2343	0/0:5,0:5:15.05:0,15,315
chr10	74651968	.	AT	A	1672.74	PASS	AB=0.931;AC=9;AF=0.161;AN=56;BaseQRankSum=8.389;DP=516;FS=1.630;HRun=7;HaplotypeScore=52.8476;InbreedingCoeff=0.8793;MQ=67.46;MQ0=0;MQRankSum=0.146;QD=17.42;ReadPosRankSum=1.903;VQSLOD=3.3999;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,105,1247	0/0:7,0:7:18.05:0,18,215	0/0:18,0:18:25.36:0,25,305	0/0:10,1:8:18.38:0,18,176	0/0:32,0:32:87.16:0,87,1068	0/0:16,0:16:45.14:0,45,565	0/0:15,0:15:36.42:0,36,473	0/0:23,0:23:63.18:0,63,760	0/0:20,0:20:51.15:0,51,627	1/1:2,16:18:48.09:483,48,0	1/1:1,17:18:51.11:519,51,0	0/0:10,0:10:27.09:0,27,335	0/0:13,0:13:36.09:0,36,426	0/0:18,0:18:48.11:0,48,565	0/0:17,0:17:33.11:0,33,415	1/1:3,13:16:36.08:367,36,0	0/0:33,0:33:96.31:0,96,1206	0/0:26,0:26:66.19:0,66,815	0/0:15,0:15:39.11:0,39,479	0/0:19,0:19:51.14:0,51,616	0/0:10,0:10:30.08:0,30,364	0/0:6,0:6:15.05:0,15,188	0/0:13,0:13:39.07:0,39,459	0/0:16,0:16:42.09:0,42,509	1/1:0,17:17:45.10:459,45,0	0/1:25,2:26:7.07:7,0,522	0/0:25,0:25:72.19:0,72,865	0/0:16,0:16:36.07:0,36,434
chr10	74652405	.	AAC	A	1341.32	PASS	AB=0.967;AC=17;AF=0.304;AN=56;BaseQRankSum=3.135;DP=578;FS=3.141;HRun=0;HaplotypeScore=105.7424;InbreedingCoeff=0.3225;MQ=62.01;MQ0=7;MQRankSum=-0.369;QD=5.08;ReadPosRankSum=-6.657;VQSLOD=0.0792;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:41,1:42:30.69:108,0,31	0/0:12,0:12:28.76:0,29,418	0/0:34,0:12:31.45:0,31,309	0/0:27,0:10:19.57:0,20,165	0/0:27,0:27:65.98:0,66,886	0/0:15,0:15:41.86:0,42,526	0/0:19,0:19:54.07:0,54,738	1/1:19,0:19:15.27:229,15,0	1/1:18,1:19:11.81:168,12,0	1/1:20,1:20:27.64:252,28,0	0/1:23,0:22:47.30:89,0,47	0/1:18,1:17:16.27:16,0,42	0/1:17,0:16:4.33:66,0,4	0/0:15,0:15:45.08:0,45,571	0/0:16,0:16:44.81:0,45,581	0/1:11,1:12:16.27:108,0,16	0/0:37,0:37:99:0,108,1510	0/1:26,3:29:28.25:178,0,28	0/0:17,0:17:42.83:0,43,525	0/0:22,0:22:59.71:0,60,765	0/0:16,0:16:46.32:0,46,571	1/1:8,0:8:6.26:62,6,0	0/1:17,1:18:0.77:72,0,1	0/1:12,0:12:3.56:22,0,4	0/1:25,0:23:51.08:146,0,51	0/0:19,0:18:43.44:0,43,588	0/0:26,0:26:65.75:0,66,825	0/0:12,0:11:29.95:0,30,368
chr10	74652406	.	AC	A	2859.62	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=8.636;DP=570;FS=1.125;HRun=1;HaplotypeScore=92.0026;InbreedingCoeff=0.9591;MQ=63.22;MQ0=6;MQRankSum=-7.269;QD=11.00;ReadPosRankSum=-1.261;VQSLOD=1.2991;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:39,1:40:61.02:313,61,0	0/0:12,0:12:35.68:0,36,355	0/0:33,1:13:34.45:0,34,301	0/0:25,0:9:15.06:0,15,118	0/0:25,0:25:65.32:0,65,653	0/0:16,0:16:42.82:0,43,425	0/0:18,0:18:54.10:0,54,586	1/1:18,1:19:43.18:338,43,0	1/1:17,2:19:22.49:161,22,0	1/1:18,3:20:56.06:495,56,0	1/1:23,0:22:41.23:296,41,0	1/1:18,1:17:1.39:70,1,0	1/1:17,0:16:31.58:170,32,0	0/0:15,0:15:44.44:0,44,432	0/0:16,0:16:41.03:0,41,436	1/1:11,0:11:23.24:177,23,0	0/0:38,0:38:99:0,111,1190	1/1:25,3:28:49.53:374,50,0	0/0:17,0:17:42.72:0,43,387	0/0:22,0:22:52.42:0,52,543	0/0:16,0:16:46.31:0,46,471	1/1:6,2:8:19.05:134,19,0	1/1:19,0:19:30.95:181,31,0	1/1:10,1:11:10.27:68,10,0	1/1:24,1:23:49.61:308,50,0	0/0:19,0:18:23.76:0,24,447	0/0:25,0:25:63.37:0,63,622	0/0:12,0:11:28.11:0,28,274
chr10	74652407	.	C	CAAAA	4299.57	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=7.781;DP=573;FS=1.394;HRun=12;HaplotypeScore=117.3826;InbreedingCoeff=0.5820;MQ=64.87;MQ0=6;MQRankSum=-9.158;QD=17.55;ReadPosRankSum=-2.220;VQSLOD=2.7112;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,10:41:80.93:1461,81,0	0/0:12,0:12:30.10:0,30,493	0/0:34,0:13:32.74:0,33,374	0/0:27,0:11:21.26:0,21,242	0/0:24,0:24:57.46:0,57,798	0/0:15,0:15:45.11:0,45,684	0/0:18,0:18:54.18:0,54,913	0/0:20,0:20:6.98:0,7,48	1/1:7,1:20:11.65:123,12,0	0/1:21,0:20:41.68:42,0,59	0/1:23,0:22:17.58:18,0,161	1/1:7,12:18:19.78:449,20,0	1/1:14,3:16:36.20:635,36,0	0/0:15,0:15:42.14:0,42,670	0/0:16,0:16:42.12:0,42,673	0/1:11,0:11:35.57:36,0,75	0/0:37,0:37:91.33:0,91,1644	0/1:28,0:28:26.24:26,0,215	0/0:19,0:19:38.67:0,39,546	0/0:21,0:21:53.18:0,53,747	0/0:17,0:17:42.07:0,42,634	1/1:6,2:8:20.86:378,21,0	1/1:4,15:19:37:781,37,0	1/1:8,3:12:18.90:295,19,0	0/1:25,0:23:56.51:57,0,178	0/0:19,0:18:25.18:0,25,732	0/0:23,0:23:57.16:0,57,891	0/0:11,0:10:30.09:0,30,463
chr10	74654263	.	GA	G	141.47	PASS	AB=0.807;AC=9;AF=0.173;AN=52;BaseQRankSum=1.933;DP=523;FS=3.810;HRun=16;HaplotypeScore=79.8934;InbreedingCoeff=0.5346;MQ=51.27;MQ0=13;MQRankSum=2.376;QD=1.75;ReadPosRankSum=2.302;VQSLOD=-0.7070;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,2:45:60.46:0,60,393	0/1:5,2:7:24.05:24,0,36	./.	./.	0/0:29,1:34:12.73:0,13,217	0/0:11,0:11:13.34:0,13,104	0/0:25,1:26:29.12:0,29,369	0/0:26,1:23:7.64:0,8,259	0/0:18,1:19:23.91:0,24,179	0/1:13,3:16:4.06:31,0,4	1/1:9,4:13:7.22:40,7,0	0/0:15,1:16:18.46:0,18,141	0/0:10,0:9:8.22:0,8,47	0/0:19,1:21:12.16:0,12,186	0/0:16,1:17:12.79:0,13,202	1/1:6,4:10:10.71:60,11,0	0/0:25,2:26:2.76:0,3,276	0/0:19,0:26:49.19:0,49,349	0/0:19,1:19:12.59:0,13,208	0/0:24,0:25:32.82:0,33,254	0/0:11,0:11:17.97:0,18,148	0/0:19,0:19:25.74:0,26,132	0/0:19,1:20:22.33:0,22,147	0/0:20,2:22:11.25:0,11,154	1/1:7,7:14:20.37:125,20,0	0/0:22,0:22:14.83:0,15,128	0/1:16,1:20:2.52:3,0,164	0/0:8,0:11:11.67:0,12,79
chr10	74656402	.	GAC	G	1064.49	PASS	AB=0.886;AC=15;AF=0.268;AN=56;BaseQRankSum=1.684;DP=726;FS=1.717;HRun=0;HaplotypeScore=123.3233;InbreedingCoeff=-0.0283;MQ=67.18;MQ0=17;MQRankSum=5.301;QD=3.22;ReadPosRankSum=-1.073;VQSLOD=2.3480;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:50,0:49:99:135,0,142	0/1:10,2:12:45.27:45,0,232	0/0:65,0:21:17.99:0,18,218	0/0:61,0:34:32.97:0,33,436	0/0:21,1:22:21.57:0,22,469	0/1:14,2:17:27.20:27,0,473	0/1:20,6:26:24.18:24,0,544	1/1:16,11:26:12.02:304,12,0	0/0:25,0:25:40.55:0,41,245	0/1:21,0:21:25.42:25,0,133	0/0:17,0:17:13.69:0,14,88	0/0:23,0:23:20.39:0,20,118	0/0:20,0:20:20.50:0,21,123	0/1:18,3:21:62.18:62,0,492	0/1:13,3:16:42.24:42,0,299	0/0:20,0:20:23.98:0,24,147	0/0:29,1:30:6.48:0,6,773	1/1:7,11:18:28.19:315,28,0	0/1:15,1:16:15.45:15,0,175	0/0:16,0:16:24.07:0,24,353	0/1:50,7:54:67.67:68,0,1217	0/0:24,0:24:19.94:0,20,120	0/0:9,0:9:7.66:0,8,33	0/0:31,0:31:26.02:0,26,150	0/0:22,0:22:26.59:0,27,183	0/1:17,6:24:99:150,0,539	0/1:21,4:25:18.15:18,0,646	0/0:9,0:9:24.07:0,24,352
chr10	74656425	.	A	ACG	725.89	PASS	AB=0.986;AC=17;AF=0.304;AN=56;BaseQRankSum=12.838;DP=754;FS=1.935;HRun=0;HaplotypeScore=128.1612;InbreedingCoeff=0.5903;MQ=52.80;MQ0=18;MQRankSum=-8.162;QD=2.72;ReadPosRankSum=5.637;VQSLOD=2.0402;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:49,0:47:88.97:89,0,303	0/0:12,0:12:35.99:0,36,393	0/0:56,0:16:39:0,39,405	0/0:54,0:19:51.04:0,51,612	0/0:19,0:18:26:0,26,562	0/0:17,0:17:28.70:0,29,590	0/0:31,0:31:75.05:0,75,880	0/0:25,0:24:62.17:0,62,460	1/1:25,2:27:6.80:145,7,0	0/1:25,0:25:60.52:61,0,85	0/1:13,0:13:5.66:21,0,6	1/1:20,1:21:17.01:96,17,0	1/1:20,1:21:15.66:84,16,0	0/0:23,0:23:63.04:0,63,742	0/0:15,0:15:39:0,39,457	0/1:20,0:20:1.25:66,0,1	0/0:35,0:34:92.63:0,93,1088	0/0:17,0:17:32.94:0,33,224	0/0:26,0:26:65.79:0,66,610	0/0:19,0:19:45.04:0,45,511	0/0:69,0:66:99:0,174,2030	1/1:21,1:22:3.98:56,4,0	1/1:9,1:11:4.58:17,5,0	1/1:29,2:31:22.45:144,22,0	0/1:25,2:27:4.65:130,0,5	0/0:29,0:29:82.92:0,83,885	0/0:28,0:28:75.06:0,75,919	0/0:12,0:12:36:0,36,450
chr10	74656427	.	A	ACGCACG	6748.80	PASS	AB=0.880;AC=22;AF=0.393;AN=56;BaseQRankSum=-6.088;DP=775;FS=2.509;HRun=0;HaplotypeScore=156.9300;InbreedingCoeff=0.6555;MQ=53.70;MQ0=17;MQRankSum=-6.184;QD=21.63;ReadPosRankSum=5.652;VQSLOD=4.6191;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:49:2.21:0,2,546	0/0:11,0:11:32.96:0,33,583	0/0:51,0:15:42.03:0,42,600	0/0:53,0:20:44.70:0,45,610	0/0:18,0:17:44.74:0,45,870	0/0:16,0:16:48.16:0,48,952	0/0:32,0:32:63.68:0,64,1276	0/1:27,0:26:24.12:24,0,540	1/1:4,20:30:32.19:1209,32,0	1/1:5,19:28:64.14:1245,64,0	1/1:1,10:15:6.49:219,6,0	1/1:0,14:21:21.54:709,22,0	1/1:0,18:22:21.07:712,21,0	0/0:23,0:23:63.18:0,63,1128	0/0:16,0:16:39.01:0,39,756	1/1:2,12:19:11.54:854,12,0	0/0:36,0:36:93.15:0,93,1688	0/1:16,0:16:32.73:33,0,396	0/0:26,0:26:61.27:0,61,914	0/0:19,0:19:45.15:0,45,900	0/0:68,0:65:99:0,134,3108	0/1:2,19:24:5.63:309,0,6	1/1:2,9:16:3.01:109,3,0	1/1:1,24:33:28.61:853,29,0	1/1:5,18:30:13.60:468,14,0	0/1:30,0:30:5.58:6,0,1322	0/0:30,0:30:78.25:0,78,1534	0/0:12,0:12:36.10:0,36,720
chr10	74656429	.	ACG	A	519.41	PASS	AB=0.890;AC=4;AF=0.071;AN=56;BaseQRankSum=4.511;DP=759;FS=0.475;HRun=0;HaplotypeScore=128.4507;InbreedingCoeff=-0.0871;MQ=54.28;MQ0=15;MQRankSum=4.372;QD=4.44;ReadPosRankSum=2.012;VQSLOD=3.0147;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,39:48:99:439,0,119	0/0:11,0:11:5.06:0,5,297	0/0:48,0:15:32.65:0,33,320	0/0:49,0:18:30.32:0,30,435	0/0:16,0:15:41.43:0,41,541	0/0:16,0:16:19.84:0,20,577	0/0:34,0:34:63.61:0,64,932	0/1:26,0:25:77.04:77,0,165	0/0:31,0:31:56.71:0,57,543	0/0:28,0:27:53.38:0,53,611	0/0:14,0:14:22.29:0,22,183	0/0:18,0:18:21.04:0,21,219	0/0:22,0:22:23.72:0,24,251	0/1:24,0:24:29.07:29,0,603	0/0:15,0:15:13.83:0,14,451	0/0:16,0:16:29.94:0,30,287	0/0:37,0:36:63.66:0,64,1159	0/1:17,0:17:33.70:84,0,34	0/0:25,0:25:37.75:0,38,444	0/0:19,0:19:43.09:0,43,542	0/0:70,0:67:67.90:0,68,1880	0/0:25,0:25:34.25:0,34,265	0/0:17,0:17:13.75:0,14,93	0/0:30,0:30:32.62:0,33,317	0/0:28,0:28:34.77:0,35,327	0/0:31,0:31:9.01:0,9,841	0/0:30,0:30:49.06:0,49,949	0/0:12,0:12:14.25:0,14,439
chr10	74657446	.	TA	T	838.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=10.136;DP=634;FS=0.000;HRun=2;HaplotypeScore=82.0710;InbreedingCoeff=0.9914;MQ=85.33;MQ0=0;MQRankSum=-6.019;QD=18.22;ReadPosRankSum=0.492;VQSLOD=3.5412;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:39,7:46:99:933,120,0	0/0:6,0:6:18.06:0,18,267	0/0:27,0:27:73.48:0,73,1047	0/0:24,0:24:63.14:0,63,886	0/0:15,0:15:45.12:0,45,632	0/0:26,0:26:78.26:0,78,1168	0/0:30,0:30:90.29:0,90,1325	0/0:33,0:33:93.30:0,93,1357	0/0:24,0:24:72.23:0,72,1057	0/0:20,0:20:59.54:0,60,815	0/0:23,0:23:60.20:0,60,865	0/0:20,0:20:60.20:0,60,881	0/0:18,0:18:51.16:0,51,743	0/0:27,0:27:78.72:0,79,1147	0/0:13,0:13:39.13:0,39,585	0/0:17,0:17:51.16:0,51,736	0/0:40,0:40:99:0,120,1796	0/0:36,0:36:93.83:0,94,1512	0/0:21,0:21:63.15:0,63,878	0/0:17,0:17:45.13:0,45,633	0/0:29,0:28:84.26:0,84,1215	0/0:10,0:10:30.10:0,30,450	0/0:16,0:16:48.16:0,48,717	0/0:16,0:16:45.15:0,45,674	0/0:19,0:19:57.19:0,57,847	0/0:20,0:20:60.20:0,60,896	0/0:25,0:25:72.24:0,72,1079	0/0:16,0:16:48.14:0,48,675
chr10	74657452	.	A	AT	5030.41	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-0.707;DP=632;FS=2.635;HRun=0;HaplotypeScore=66.3612;InbreedingCoeff=0.9581;MQ=86.64;MQ0=0;MQRankSum=-2.602;QD=38.40;ReadPosRankSum=1.570;VQSLOD=5.1280;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:42,9:51:99:1480,140,0	0/0:5,0:5:15.05:0,15,210	0/0:25,0:25:62.78:0,63,865	0/0:25,0:25:66.19:0,66,874	0/0:14,0:14:42.14:0,42,587	0/0:27,0:27:78.25:0,78,1071	0/0:32,0:32:90.27:0,90,1224	0/0:33,0:33:93.29:0,93,1259	0/0:22,0:22:66.22:0,66,916	1/1:0,21:21:63.20:982,63,0	1/1:1,22:23:60.20:939,60,0	0/0:21,0:21:63.20:0,63,860	0/0:19,0:19:57.18:0,57,781	0/0:25,0:25:75.22:0,75,1001	0/0:13,0:13:39.13:0,39,545	1/1:0,17:17:48.16:767,48,0	0/0:42,0:42:99:0,126,1727	0/0:36,0:36:99:0,102,1418	0/0:18,0:18:54.18:0,54,752	0/0:16,0:16:48.14:0,48,638	0/0:28,0:27:84.26:0,84,1143	0/0:10,0:10:30.10:0,30,419	0/0:15,0:15:45.15:0,45,628	0/0:17,0:17:48.15:0,48,655	1/1:0,19:19:54.18:862,54,0	0/0:17,1:18:3.23:0,3,623	0/0:27,0:27:81.21:0,81,1050	0/0:13,0:13:39.13:0,39,545
chr10	74658048	.	A	AC	1339.65	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.060;DP=394;FS=8.267;HRun=1;HaplotypeScore=47.1538;InbreedingCoeff=0.9673;MQ=79.98;MQ0=0;MQRankSum=-4.396;QD=37.21;ReadPosRankSum=1.052;VQSLOD=3.4158;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,1477	0/0:5,0:5:15.05:0,15,195	0/0:13,0:13:36.12:0,36,467	0/0:19,0:19:53.97:0,54,648	0/0:19,0:19:57.12:0,57,699	0/0:14,0:14:39.11:0,39,491	0/0:15,0:15:42.14:0,42,545	0/0:10,0:10:30.10:0,30,389	0/0:10,0:10:30.10:0,30,389	1/1:0,15:15:42.11:605,42,0	1/1:0,7:7:21.07:314,21,0	0/0:15,0:15:39.13:0,39,506	0/0:15,0:15:45.15:0,45,579	0/0:11,0:11:33.11:0,33,428	0/0:4,0:4:12.04:0,12,156	1/1:0,4:4:12.04:180,12,0	0/0:27,0:27:78.24:0,78,998	0/0:21,0:21:54.18:0,54,701	0/0:13,0:13:39.13:0,39,506	0/0:7,0:7:18:0,18,209	0/0:38,0:38:99:0,108,1400	0/0:9,0:9:27.09:0,27,348	0/0:5,0:5:15.05:0,15,194	0/0:9,0:9:27.09:0,27,350	1/1:1,9:10:27.09:398,27,0	0/0:19,0:19:45.15:0,45,583	0/0:13,0:13:38.99:0,39,482	0/0:6,0:6:18.06:0,18,234
chr10	74658399	.	GT	G	916.23	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=6.210;DP=426;FS=0.000;HRun=10;HaplotypeScore=60.5312;InbreedingCoeff=0.8653;MQ=69.21;MQ0=0;MQRankSum=-1.147;QD=11.75;ReadPosRankSum=1.418;VQSLOD=2.9753;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:25.78:0,26,137	0/0:6,0:7:14.10:0,14,193	1/1:14,0:10:4.55:30,5,0	0/1:14,0:10:17.68:18,0,52	0/0:29,0:29:56.35:0,56,768	0/0:21,1:22:37.13:0,37,622	0/0:13,0:13:36.10:0,36,398	0/0:33,0:33:69.16:0,69,738	1/1:3,4:7:11.99:104,12,0	0/0:15,0:22:32.35:0,32,172	0/0:2,0:13:37.09:0,37,203	1/1:1,6:7:17.99:156,18,0	1/1:1,8:9:26.98:230,27,0	0/0:9,0:9:18.05:0,18,199	0/0:15,0:15:36.07:0,36,382	0/0:2,0:9:25.73:0,26,139	0/0:18,0:18:48.09:0,48,517	0/0:21,0:21:51.10:0,51,550	0/0:23,0:24:63:0,63,677	0/0:16,0:16:39.10:0,39,424	0/0:11,0:11:21.06:0,21,232	1/1:4,5:9:20.98:179,21,0	1/1:3,9:12:32.99:286,33,0	1/1:4,2:6:12:104,12,0	0/0:2,0:11:28.41:0,28,142	0/0:22,0:22:63.17:0,63,696	0/0:27,1:28:46.18:0,46,737	0/0:12,0:12:36.10:0,36,398
chr10	74658409	.	T	TTTTA	582.16	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=0.730;DP=428;FS=0.000;HRun=0;HaplotypeScore=92.1965;InbreedingCoeff=0.5887;MQ=66.80;MQ0=0;MQRankSum=-2.999;QD=22.39;ReadPosRankSum=-0.484;VQSLOD=3.1273;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,7:14:30.06:675,30,0	0/0:7,0:7:21.07:0,21,342	0/1:12,0:7:6.78:7,0,78	0/0:17,0:10:3.76:0,4,105	0/0:26,0:26:78.23:0,78,1303	0/0:26,0:26:62.41:0,62,1044	0/0:16,0:16:48.08:0,48,705	0/0:22,0:22:63.16:0,63,1013	0/0:5,0:5:15.02:0,15,159	0/0:16,0:16:14.02:0,14,214	0/0:16,0:16:38.06:0,38,267	0/0:6,0:6:18.04:0,18,199	0/0:10,0:10:30.07:0,30,327	0/0:12,0:12:35.64:0,36,448	0/0:13,0:13:36.07:0,36,568	0/0:9,0:9:25.79:0,26,139	0/0:19,0:19:54.05:0,54,845	0/0:21,0:21:59.13:0,59,917	0/0:25,0:25:74.88:0,75,1053	0/0:17,0:17:45.07:0,45,694	0/0:7,0:7:21.07:0,21,375	0/0:9,0:9:26.96:0,27,252	0/0:11,0:11:32.81:0,33,335	0/0:6,0:6:14.68:0,15,131	0/0:17,0:17:43.58:0,44,275	0/0:26,0:26:69.22:0,69,1150	0/0:28,0:28:78.13:0,78,1271	0/0:15,0:15:45.12:0,45,721
chr10	74658425	.	A	AT	2497.82	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=4.286;DP=420;FS=13.652;HRun=9;HaplotypeScore=56.7364;InbreedingCoeff=0.9691;MQ=69.86;MQ0=0;MQRankSum=-8.665;QD=19.51;ReadPosRankSum=-2.402;VQSLOD=2.1151;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,10:15:30.04:318,30,0	0/0:6,0:6:14.99:0,15,130	0/0:15,0:11:19.37:0,19,138	0/0:16,0:11:8.66:0,9,99	0/0:24,0:24:53.97:0,54,469	0/0:25,0:25:65.96:0,66,569	0/0:18,0:18:47.97:0,48,412	0/0:21,0:21:47.97:0,48,417	1/1:3,1:6:11.69:82,12,0	1/1:3,11:14:33.09:365,33,0	1/1:5,12:17:42.10:451,42,0	1/1:2,0:6:11.36:57,11,0	1/1:4,1:10:22.98:137,23,0	0/0:10,0:10:23.97:0,24,208	0/0:12,0:12:32.99:0,33,287	1/1:1,13:14:42.06:444,42,0	0/0:20,0:20:59.99:0,60,521	0/0:20,0:20:47.95:0,48,411	0/0:16,0:16:35.97:0,36,310	0/0:13,0:13:38.99:0,39,338	0/0:7,0:7:14.98:0,15,126	1/1:2,0:9:20.01:105,20,0	1/1:4,0:12:25.97:150,26,0	1/1:2,0:5:11.60:67,12,0	1/1:2,18:20:51.09:544,51,0	0/0:25,0:25:62.97:0,63,544	0/0:26,0:26:59.95:0,60,517	0/0:17,0:17:41.99:0,42,365
chr10	74659183	.	TA	T	6487.52	PASS	AB=0.929;AC=23;AF=0.411;AN=56;BaseQRankSum=18.007;DP=682;FS=0.965;HRun=10;HaplotypeScore=94.7796;InbreedingCoeff=0.8790;MQ=70.29;MQ0=0;MQRankSum=-1.153;QD=19.84;ReadPosRankSum=1.766;VQSLOD=5.3562;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,48:56:99:1095,108,0	0/0:11,0:11:27.05:0,27,289	0/0:8,0:8:15.02:0,15,166	0/1:12,1:13:66.87:67,0,71	0/0:23,0:24:60:0,60,645	0/0:20,0:20:51.14:0,51,563	0/0:24,1:25:43.12:0,43,695	0/0:19,0:19:33.08:0,33,359	1/1:4,26:30:71.96:625,72,0	1/1:3,31:34:89.95:776,90,0	1/1:3,12:15:3.31:254,3,0	1/1:3,16:19:8.79:305,9,0	1/1:2,25:27:68.98:599,69,0	0/0:13,0:13:36.09:0,36,390	0/0:30,0:30:81.20:0,81,887	1/1:2,28:30:71.97:625,72,0	0/0:41,0:42:99:0,111,1202	0/0:26,0:26:69.18:0,69,756	0/0:11,1:12:7.03:0,7,300	0/0:30,1:31:65.39:0,65,917	0/0:33,0:33:84.19:0,84,910	1/1:4,26:31:77.02:657,77,0	1/1:5,14:19:41.95:360,42,0	1/1:5,23:29:67.94:579,68,0	1/1:1,23:24:62.99:547,63,0	0/0:21,2:23:34.01:0,34,580	0/0:25,0:25:69.15:0,69,750	0/0:13,0:13:33.09:0,33,365
chr10	74659645	.	GT	G	433.17	PASS	AB=0.964;AC=3;AF=0.054;AN=56;BaseQRankSum=2.631;DP=611;FS=0.000;HRun=10;HaplotypeScore=71.9179;InbreedingCoeff=0.7350;MQ=73.99;MQ0=5;MQRankSum=-0.967;QD=8.33;ReadPosRankSum=1.880;VQSLOD=2.0626;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:25:62.20:528,62,0	0/0:7,0:7:15.04:0,15,166	0/1:26,1:17:1.93:2,0,188	0/0:24,0:17:32.49:0,32,284	0/0:24,2:26:17.16:0,17,636	0/0:19,0:20:59.99:0,60,638	0/0:17,1:18:22.04:0,22,453	0/0:30,0:31:63:0,63,669	0/0:23,0:23:60.14:0,60,647	0/0:29,0:28:75.20:0,75,822	0/0:35,0:34:96.17:0,96,1028	0/0:15,0:15:39.11:0,39,431	0/0:11,0:11:33.09:0,33,365	0/0:20,0:20:48.12:0,48,523	0/0:18,0:18:45.08:0,45,472	0/0:22,0:22:51.13:0,51,556	0/0:31,1:32:61.18:0,61,902	0/0:22,0:22:57.13:0,57,618	0/0:21,0:21:47.79:0,48,501	0/0:19,1:20:31.07:0,31,552	0/0:20,0:23:50.56:0,51,522	0/0:19,0:19:51.12:0,51,555	0/0:16,0:16:30.08:0,30,332	0/0:16,0:16:21.62:0,22,432	0/0:23,0:23:54.15:0,54,597	0/0:22,0:22:66.17:0,66,723	0/0:31,1:33:66.86:0,67,930	0/0:12,0:12:33.09:0,33,365
chr10	74659658	.	CT	C	1963.77	PASS	AB=0.923;AC=12;AF=0.214;AN=56;BaseQRankSum=6.336;DP=601;FS=5.158;HRun=10;HaplotypeScore=66.9735;InbreedingCoeff=0.6200;MQ=68.98;MQ0=5;MQRankSum=1.049;QD=10.61;ReadPosRankSum=1.950;VQSLOD=2.9232;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:43.10:0,43,655	0/0:9,0:9:27.07:0,27,299	0/1:23,0:12:9.40:9,0,121	0/0:25,0:17:26.85:0,27,273	0/1:24,3:27:3.21:3,0,605	0/0:21,1:22:28.57:0,29,539	0/0:17,0:17:45.12:0,45,498	0/1:22,2:25:4.15:4,0,396	0/0:23,0:23:51.14:0,51,564	1/1:3,22:25:65.96:568,66,0	1/1:4,30:33:78.65:722,79,0	0/0:16,1:17:15.97:0,16,376	0/0:13,0:13:30.08:0,30,332	0/0:20,0:20:54.13:0,54,589	0/0:16,0:16:42.11:0,42,457	1/1:3,15:18:41.98:365,42,0	0/0:33,0:33:93.10:0,93,994	0/0:20,0:20:57.15:0,57,631	0/0:19,1:20:19.05:0,19,430	0/0:20,0:20:60.16:0,60,657	0/0:21,0:21:51.14:0,51,564	0/0:19,2:21:8.04:0,8,537	0/0:14,0:14:27.07:0,27,299	0/0:20,0:20:55.29:0,55,579	1/1:2,18:20:50.98:443,51,0	0/0:24,0:24:60.15:0,60,655	0/0:30,2:32:61:0,61,872	0/1:10,2:13:19.19:19,0,247
chr10	74660129	.	T	TTAAA	1737.12	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=0.380;DP=446;FS=0.000;HRun=0;HaplotypeScore=74.3887;InbreedingCoeff=0.8779;MQ=68.48;MQ0=2;MQRankSum=-2.300;QD=31.02;ReadPosRankSum=0.516;VQSLOD=3.3899;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:14:26.94:329,27,0	0/0:7,0:7:15.04:0,15,218	0/0:19,0:13:0.98:0,1,109	0/0:12,0:11:12.04:0,12,186	0/0:26,0:26:54.17:0,54,860	0/0:26,0:26:72.25:0,72,1183	0/0:8,0:8:24.08:0,24,394	0/0:41,0:40:78.21:0,78,1164	1/1:2,5:8:15.05:367,15,0	0/0:24,0:24:45.15:0,45,740	0/0:12,0:12:18.06:0,18,296	1/1:6,1:7:3.01:73,3,0	1/1:3,9:11:24.08:586,24,0	0/0:15,0:15:24.08:0,24,394	0/0:18,0:18:45.14:0,45,713	0/0:18,0:18:30.07:0,30,443	0/0:32,0:32:23.33:0,23,828	0/0:24,0:24:57.15:0,57,902	0/0:14,0:14:33.11:0,33,541	0/0:12,0:12:21.07:0,21,345	0/0:10,0:10:18.06:0,18,296	./.	1/1:6,2:8:15.04:262,15,0	1/1:2,4:7:12.04:293,12,0	0/0:15,0:15:36.12:0,36,592	0/0:14,0:14:33.09:0,33,516	0/0:30,0:30:66.23:0,66,1081	0/0:11,0:11:9.03:0,9,148
chr10	74660236	.	G	GA	2590.32	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.853;DP=512;FS=8.469;HRun=8;HaplotypeScore=57.7736;InbreedingCoeff=0.9950;MQ=80.90;MQ0=0;MQRankSum=-5.027;QD=24.91;ReadPosRankSum=2.670;VQSLOD=4.3689;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:51.11:574,51,0	0/0:12,0:12:30.01:0,30,274	0/0:16,0:15:32.22:0,32,274	0/0:18,0:18:27.04:0,27,311	0/0:23,0:23:63.03:0,63,577	0/0:24,0:24:63.03:0,63,577	0/0:8,0:8:21:0,21,188	0/0:37,0:37:90.04:0,90,824	1/1:2,11:13:27.08:312,27,0	0/0:27,0:27:78.03:0,78,710	0/0:20,0:20:57.03:0,57,522	1/1:1,13:14:33.10:381,33,0	1/1:2,19:21:51.15:588,51,0	0/0:18,0:18:48.02:0,48,439	0/0:10,0:10:21:0,21,192	0/0:15,0:15:42.02:0,42,384	0/0:33,0:33:87.04:0,87,796	0/0:9,0:9:23.51:0,24,201	0/0:14,0:14:36.01:0,36,326	0/0:28,1:29:43.38:0,43,640	0/0:12,0:12:21:0,21,192	1/1:2,7:9:18.05:208,18,0	1/1:1,11:12:30.09:346,30,0	1/1:0,11:11:33.10:381,33,0	0/0:13,0:13:30.01:0,30,275	0/0:25,0:25:72.04:0,72,659	0/0:25,0:25:72.03:0,72,659	0/0:20,0:20:54.03:0,54,494
chr10	74660419	.	G	GT	1137.38	PASS	AB=0.866;AC=26;AF=0.464;AN=56;BaseQRankSum=4.928;DP=452;FS=13.196;HRun=14;HaplotypeScore=106.6426;InbreedingCoeff=0.2195;MQ=75.94;MQ0=6;MQRankSum=-4.618;QD=4.08;ReadPosRankSum=-3.329;VQSLOD=-0.6560;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:19:19.09:119,19,0	0/1:2,1:3:17.36:17,0,30	0/0:30,0:16:7.40:0,7,64	0/1:29,0:15:2.72:7,0,3	0/1:20,1:24:34.73:35,0,126	0/1:25,0:25:42.72:43,0,113	0/1:13,1:14:47.65:55,0,48	1/1:13,11:26:34.63:273,35,0	1/1:9,0:11:15.21:76,15,0	0/0:11,0:18:23.36:0,23,85	0/0:7,0:11:1.34:0,1,14	1/1:7,0:9:20.10:110,20,0	1/1:20,0:23:38.60:197,39,0	0/0:8,1:9:6.91:0,7,63	0/0:8,2:10:13.48:0,13,122	0/0:7,0:14:28.49:0,28,112	0/0:28,4:33:15.81:0,16,329	0/1:7,7:16:7.53:147,0,8	0/1:10,2:12:35.33:35,0,48	0/0:14,0:14:20.34:0,20,129	0/1:8,2:10:14.63:15,0,40	1/1:6,0:7:9.23:56,9,0	1/1:6,0:9:11.52:62,12,0	1/1:7,0:8:6.18:30,6,0	0/0:7,0:9:4.72:0,5,25	0/0:22,0:23:4.68:0,5,104	0/1:18,2:21:6.04:6,0,137	0/1:9,1:12:38.61:39,0,59
chr10	74660435	.	TTG	T	911.76	PASS	AB=0.993;AC=14;AF=0.250;AN=56;BaseQRankSum=7.097;DP=441;FS=7.281;HRun=0;HaplotypeScore=88.8039;InbreedingCoeff=0.2236;MQ=68.20;MQ0=7;MQRankSum=-2.651;QD=6.12;ReadPosRankSum=-2.039;VQSLOD=1.9185;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:84.93:85,0,221	0/0:5,0:5:14.88:0,15,230	0/0:45,0:16:20.02:0,20,332	0/1:32,0:13:3.66:4,0,132	0/0:22,0:22:62.51:0,63,960	0/0:19,0:19:35.38:0,35,733	0/0:14,0:14:37.81:0,38,484	0/0:30,0:30:43.36:0,43,1077	0/0:12,0:12:0.99:0,1,188	0/1:15,1:16:22.55:191,0,23	1/1:10,0:10:16.86:139,17,0	0/1:11,0:11:11.26:11,0,172	0/1:19,0:19:58.35:58,0,249	0/0:7,0:7:17.57:0,18,216	0/0:10,0:10:23.01:0,23,417	1/1:11,2:13:38.25:418,38,0	0/0:34,0:34:96.18:0,96,1453	0/0:16,0:16:41.52:0,42,538	0/0:9,0:9:27.04:0,27,423	0/0:13,0:13:38.80:0,39,645	0/0:5,0:5:12.04:0,12,177	0/1:11,0:11:30:30,0,105	0/1:9,0:9:34.65:35,0,57	0/1:4,0:4:7.35:7,0,35	1/1:3,1:4:10.81:99,11,0	0/0:16,0:16:48.10:0,48,734	0/0:17,0:17:46.59:0,47,670	0/0:18,0:17:44.60:0,45,648
chr10	74660443	.	T	TG	1586.52	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=8.066;DP=442;FS=9.635;HRun=3;HaplotypeScore=78.4763;InbreedingCoeff=0.5343;MQ=70.49;MQ0=7;MQRankSum=-1.447;QD=7.55;ReadPosRankSum=0.898;VQSLOD=-0.0160;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:20:36.71:37,0,100	0/0:5,0:5:13.85:0,14,148	0/1:44,0:16:1.32:1,0,193	0/1:33,0:15:12.94:13,0,96	0/0:22,0:22:58.93:0,59,649	0/0:15,0:15:44.83:0,45,466	0/0:16,0:16:40.81:0,41,409	0/0:26,0:26:72.15:0,72,805	0/1:14,0:14:33.79:34,0,36	1/1:2,13:16:44.67:535,45,0	1/1:2,9:11:26.59:317,27,0	0/1:11,0:12:4.99:56,0,5	0/1:14,0:15:35.56:53,0,36	0/0:7,0:7:15.87:0,16,144	0/0:11,0:11:26.86:0,27,274	1/1:4,11:15:35.80:403,36,0	0/0:31,0:31:87.65:0,88,871	0/0:15,0:15:37.20:0,37,359	0/0:10,0:10:22.82:0,23,238	0/0:14,0:14:39.10:0,39,447	0/0:8,0:8:20.93:0,21,186	1/1:9,0:9:23.47:93,23,0	1/1:11,0:11:11.68:66,12,0	1/1:5,0:5:1.80:21,2,0	1/1:2,3:5:12.03:151,12,0	0/0:16,0:16:44:0,44,455	0/0:19,0:19:31.63:0,32,419	0/0:17,0:16:32.20:0,32,397
chr10	74660446	.	G	GT	1788.81	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=11.487;DP=446;FS=0.000;HRun=8;HaplotypeScore=79.3451;InbreedingCoeff=0.8744;MQ=71.51;MQ0=6;MQRankSum=-4.521;QD=10.78;ReadPosRankSum=-0.172;VQSLOD=2.3692;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,10:20:24.14:249,24,0	0/0:6,0:6:12:0,12,109	0/0:41,0:17:16.45:0,16,192	0/1:32,0:15:14.99:15,0,57	0/0:23,0:23:29.02:0,29,441	0/0:16,0:16:32.99:0,33,302	0/0:16,0:16:35.02:0,35,327	0/0:27,0:27:68.30:0,68,625	1/1:6,7:13:17.07:180,17,0	1/1:15,0:15:36.57:201,37,0	1/1:11,0:11:19.15:117,19,0	1/1:4,7:11:18.05:208,18,0	1/1:8,7:15:22.42:245,22,0	0/0:6,0:6:8.99:0,9,82	0/0:11,0:11:20.99:0,21,192	1/1:16,0:16:5.87:134,6,0	0/0:31,0:31:56.92:0,57,506	0/0:16,0:16:23.94:0,24,211	0/0:9,0:9:18:0,18,164	0/0:14,0:14:36.02:0,36,329	0/0:8,0:8:15:0,15,137	1/1:0,10:10:27.08:312,27,0	1/1:3,8:11:17.92:208,18,0	1/1:1,5:6:8.51:75,9,0	1/1:5,0:5:11.30:64,11,0	0/0:16,0:16:33:0,33,302	0/0:20,0:20:35.95:0,36,320	0/0:17,0:16:33.01:0,33,302
chr10	74661092	.	CATT	C	125.30	PASS	AB=0.933;AC=11;AF=0.250;AN=44;BaseQRankSum=5.560;DP=194;FS=5.338;HRun=0;HaplotypeScore=41.7964;InbreedingCoeff=0.5235;MQ=55.49;MQ0=10;MQRankSum=-2.695;QD=3.80;ReadPosRankSum=0.824;VQSLOD=0.5460;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:23,0:6:15.02:0,15,179	0/0:24,0:11:4.51:0,5,96	0/0:6,0:6:6.02:0,6,80	0/0:5,0:5:13.29:0,13,163	0/0:4,0:4:12.04:0,12,160	0/0:11,0:10:30.04:0,30,354	1/1:5,0:5:3:32,3,0	1/1:6,0:5:8.91:75,9,0	./.	1/1:5,0:5:3:29,3,0	1/1:4,4:8:8.76:105,9,0	0/0:3,0:3:6.02:0,6,80	0/0:2,0:2:3.01:0,3,40	./.	0/0:23,0:23:29.45:0,29,516	0/0:12,0:11:27.06:0,27,327	0/0:6,0:6:12.04:0,12,160	0/0:3,0:3:9.03:0,9,120	0/0:10,0:10:21.01:0,21,231	./.	0/1:3,0:3:0:1,0,0	0/1:3,1:4:0:0,0,0	./.	0/0:3,0:3:6.02:0,6,84	0/0:4,0:4:9.03:0,9,119	0/1:2,0:2:8.52:9,0,34
chr10	74661471	.	A	AC	8531.49	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=9.940;DP=638;FS=10.180;HRun=4;HaplotypeScore=72.8739;InbreedingCoeff=0.9908;MQ=90.52;MQ0=0;MQRankSum=-0.417;QD=36.00;ReadPosRankSum=3.597;VQSLOD=4.8272;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,49:51:99:1885,138,0	0/0:4,0:4:12.03:0,12,136	0/0:21,0:21:12.14:0,12,419	0/0:28,0:28:45.50:0,46,687	0/0:20,0:20:60.15:0,60,666	0/0:20,0:20:60.12:0,60,665	0/0:23,0:23:60.15:0,60,668	0/0:35,0:35:96.25:0,96,1073	1/1:0,19:19:51.17:697,51,0	1/1:3,25:28:78.26:1061,78,0	1/1:1,13:14:36.12:492,36,0	1/1:2,16:18:45.15:615,45,0	1/1:1,25:26:63.21:860,63,0	0/0:19,0:19:57.16:0,57,645	0/0:21,0:21:54.15:0,54,612	1/1:2,15:17:42.14:574,42,0	0/0:31,0:31:84.22:0,84,941	0/0:18,0:18:51.15:0,51,578	0/0:26,0:26:69.19:0,69,774	0/0:24,0:24:69.20:0,69,779	0/0:30,0:30:81.23:0,81,918	1/1:1,25:26:72.15:954,72,0	1/1:0,10:10:27.09:368,27,0	1/1:0,18:18:51.17:697,51,0	1/1:1,9:10:24.08:328,24,0	0/0:29,0:29:81.21:0,81,897	0/0:33,0:33:96.24:0,96,1064	0/0:19,0:19:51.10:0,51,564
chr10	74662101	.	A	AAG	4511.59	PASS	AB=0.536;AC=21;AF=0.375;AN=56;BaseQRankSum=3.464;DP=490;FS=10.025;HRun=0;HaplotypeScore=68.0838;InbreedingCoeff=0.8720;MQ=56.43;MQ0=18;MQRankSum=-1.377;QD=24.52;ReadPosRankSum=6.726;VQSLOD=4.6066;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:29:41.08:711,41,0	0/0:4,0:4:6:0,6,54	0/0:33,0:14:14.64:0,15,130	0/0:24,0:6:5.67:0,6,29	0/0:17,0:16:41.79:0,42,379	0/0:19,0:18:48:0,48,539	0/0:19,0:19:41.83:0,42,389	0/0:29,0:25:59.04:0,59,523	1/1:2,14:18:36.70:541,37,0	1/1:4,16:18:44.71:510,45,0	1/1:0,9:9:12.04:180,12,0	0/1:2,12:15:0.49:315,0,0	1/1:3,10:15:20.73:279,21,0	0/0:8,0:8:23.90:0,24,210	0/0:16,0:16:35.87:0,36,346	1/1:1,12:13:6.25:212,6,0	0/0:30,0:29:80.94:0,81,874	0/0:17,0:15:39.02:0,39,461	0/0:15,0:13:29.96:0,30,276	0/0:17,0:16:44.88:0,45,422	0/0:12,0:11:31.67:0,32,263	1/1:1,7:8:9.01:136,9,0	1/1:1,10:11:17.98:240,18,0	1/1:1,21:23:54.10:797,54,0	1/1:1,18:19:42.03:591,42,0	0/0:24,1:23:23.47:0,23,632	0/0:17,0:16:37.87:0,38,351	0/0:4,0:1:3.01:0,3,40
chr10	74662810	.	AG	A	2208.24	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.829;DP=637;FS=10.170;HRun=1;HaplotypeScore=68.7847;InbreedingCoeff=0.9945;MQ=68.74;MQ0=1;MQRankSum=-1.773;QD=32.96;ReadPosRankSum=0.665;VQSLOD=2.4294;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1602	0/0:6,0:6:18.06:0,18,288	0/0:30,0:26:72.22:0,72,1108	0/0:26,0:23:66.15:0,66,914	0/0:24,0:24:66.19:0,66,1002	0/0:17,0:17:48.12:0,48,693	0/0:30,0:30:87.28:0,87,1363	0/0:34,0:34:99:0,102,1542	0/0:21,0:21:63.21:0,63,1006	1/1:0,22:22:60.19:819,60,0	1/1:0,14:14:33.07:439,33,0	0/0:22,0:22:66.20:0,66,1004	0/0:24,0:24:72.23:0,72,1124	0/0:10,0:10:30.10:0,30,478	0/0:24,0:24:72.23:0,72,1120	1/1:0,20:20:54.18:755,54,0	0/0:23,0:23:69.24:0,69,1100	0/0:20,0:20:57.19:0,57,910	0/0:23,0:22:60.16:0,60,922	0/0:28,0:28:75.26:0,75,1195	0/0:51,0:51:99:0,147,2323	0/0:24,0:24:63.21:0,63,1004	0/0:8,0:8:18.06:0,18,288	0/0:31,0:31:90.31:0,90,1433	1/1:0,11:11:27.05:355,27,0	0/0:25,0:25:72.25:0,72,1152	0/0:27,0:27:81.28:0,81,1291	0/0:8,0:8:24.08:0,24,384
chr10	74663183	.	C	CAA	895.02	PASS	AB=0.981;AC=17;AF=0.327;AN=52;BaseQRankSum=6.974;DP=500;FS=2.494;HRun=14;HaplotypeScore=91.9515;InbreedingCoeff=0.5456;MQ=42.30;MQ0=30;MQRankSum=-4.274;QD=4.97;ReadPosRankSum=-3.768;VQSLOD=-0.4750;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:18.06:139,0,18	0/0:1,0:1:3:0,3,25	./.	./.	0/0:21,0:24:16.18:0,16,214	0/0:19,0:16:17.68:0,18,192	0/0:18,0:16:21.32:0,21,176	0/0:21,0:19:11.61:0,12,138	1/1:8,0:9:14.67:86,15,0	0/1:24,0:18:7.67:24,0,8	0/1:18,0:15:2.31:53,0,2	1/1:4,10:14:17.42:198,17,0	1/1:7,8:13:10.58:122,11,0	0/0:17,0:17:31.98:0,32,241	0/0:13,0:13:27.29:0,27,198	0/1:6,0:5:10.06:26,0,10	0/0:42,0:49:65.06:0,65,691	0/0:30,0:28:62.80:0,63,526	0/0:16,0:18:23.35:0,23,238	0/0:18,0:15:18.61:0,19,152	0/0:11,0:7:5.68:0,6,79	1/1:7,9:15:8.98:98,9,0	1/1:13,4:18:18.48:164,18,0	1/1:8,2:12:16.67:124,17,0	0/1:18,0:14:14.96:44,0,15	0/0:27,0:28:27.99:0,28,296	0/0:28,0:31:26.80:0,27,334	0/0:8,0:5:11.99:0,12,100
chr10	74663194	.	AAAAC	A	754.55	PASS	AB=0.956;AC=10;AF=0.185;AN=54;BaseQRankSum=5.946;DP=514;FS=12.697;HRun=0;HaplotypeScore=92.7806;InbreedingCoeff=0.4480;MQ=44.82;MQ0=30;MQRankSum=-3.781;QD=5.99;ReadPosRankSum=-3.425;VQSLOD=0.2763;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:27:66.40:66,0,178	0/0:4,0:4:11.98:0,12,137	./.	0/0:2,0:1:3:0,3,29	0/0:24,0:24:53.97:0,54,831	0/0:24,0:19:16.47:0,16,739	0/0:19,0:16:44.99:0,45,644	0/0:22,0:19:41.76:0,42,522	0/1:9,1:10:27.61:28,0,301	1/1:26,1:21:8.10:170,8,0	1/1:15,2:15:34.64:271,35,0	0/0:17,0:16:11.30:0,11,247	0/0:16,0:14:17.89:0,18,219	0/0:22,0:20:39.67:0,40,718	0/0:15,0:14:30.91:0,31,476	1/1:6,1:6:15.36:134,15,0	0/0:50,0:48:86.73:0,87,1868	0/0:27,0:26:66.17:0,66,1319	0/0:21,0:19:54.32:0,54,745	0/0:17,0:14:30.82:0,31,496	0/0:12,0:8:23.87:0,24,314	0/0:14,0:13:11.90:0,12,201	0/0:19,0:19:30.47:0,30,486	0/1:14,0:13:7.35:7,0,251	0/1:19,2:18:16.72:231,0,17	0/0:27,0:26:43.39:0,43,907	0/0:25,0:25:50.07:0,50,990	0/0:8,0:5:12.04:0,12,259
chr10	74663195	.	AAAC	A	1203.26	PASS	AB=0.952;AC=10;AF=0.185;AN=54;BaseQRankSum=5.367;DP=519;FS=14.629;HRun=0;HaplotypeScore=83.5091;InbreedingCoeff=0.4842;MQ=45.16;MQ0=30;MQRankSum=-4.708;QD=9.40;ReadPosRankSum=-3.851;VQSLOD=0.9085;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:27:99:125,0,113	0/0:4,0:4:11.98:0,12,125	./.	0/0:2,0:1:2.90:0,3,16	0/0:23,0:23:53.94:0,54,737	0/0:25,0:20:20.83:0,21,654	0/0:20,0:17:44.98:0,45,568	0/0:21,0:18:41.68:0,42,458	0/1:10,0:10:12.67:13,0,252	1/1:26,3:23:29.15:329,29,0	1/1:10,7:15:35.80:348,36,0	0/0:18,0:17:25.94:0,26,278	0/0:16,0:14:17.69:0,18,195	0/0:21,0:19:35.73:0,36,584	0/0:15,0:14:22.78:0,23,385	1/1:6,1:6:17.88:179,18,0	0/0:50,0:48:99:0,100,1602	0/0:27,0:26:66.21:0,66,1117	0/0:22,0:20:49.85:0,50,640	0/0:17,0:14:29.91:0,30,431	0/0:12,0:8:23.86:0,24,269	0/0:15,0:14:18.36:0,18,209	0/0:19,0:19:17.21:0,17,379	0/1:13,1:13:30.89:31,0,194	0/1:18,3:18:10.68:338,0,11	0/0:27,1:27:22.24:0,22,777	0/0:23,0:23:54.64:0,55,841	0/0:10,0:7:18.03:0,18,269
chr10	74664750	.	TATAA	T	1442.95	PASS	AC=16;AF=0.333;AN=48;BaseQRankSum=7.940;DP=213;FS=20.764;HRun=0;HaplotypeScore=38.1051;InbreedingCoeff=0.7922;MQ=60.26;MQ0=3;MQRankSum=0.875;QD=24.88;ReadPosRankSum=2.129;VQSLOD=1.6041;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,8:15:21.07:348,21,0	0/0:4,0:4:9.03:0,9,174	0/0:3,0:1:0.47:0,0,1	0/0:8,0:5:1.29:0,1,12	0/0:7,0:7:12.04:0,12,295	0/0:22,0:22:60.20:0,60,1396	0/0:2,0:2:6.02:0,6,127	0/0:18,0:18:42.14:0,42,1008	1/1:0,3:3:9.03:149,9,0	1/1:2,5:7:15.04:225,15,0	1/1:5,3:8:9.03:149,9,0	1/1:2,4:6:12.04:199,12,0	1/1:1,2:3:6.02:100,6,0	0/0:3,0:3:6.02:0,6,148	0/0:4,0:4:9.03:0,9,221	1/1:4,3:7:9.03:149,9,0	0/0:16,0:16:30.10:0,30,737	0/0:22,0:22:48.16:0,48,1166	0/0:8,0:8:18.06:0,18,432	0/0:10,0:10:18.05:0,18,371	./.	./.	./.	./.	1/1:2,7:9:18.06:298,18,0	0/0:8,0:8:6.02:0,6,148	0/0:10,0:10:27.09:0,27,662	0/0:7,0:7:18.06:0,18,443
chr10	74664834	.	C	CTTTT	1372.94	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.528;DP=247;FS=89.541;HRun=2;HaplotypeScore=52.8787;InbreedingCoeff=0.7460;MQ=82.20;MQ0=0;MQRankSum=-4.912;QD=52.81;ReadPosRankSum=0.572;VQSLOD=0.1115;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,2:12:36.11:751,36,0	0/0:9,0:9:24.08:0,24,426	0/0:23,0:16:14.41:0,14,568	0/0:23,0:17:41.94:0,42,560	0/0:13,0:13:36.12:0,36,647	0/0:10,0:10:27.08:0,27,466	0/0:7,0:7:21.07:0,21,392	0/0:11,0:11:30.10:0,30,554	0/0:8,0:8:15.05:0,15,255	1/1:2,0:2:6.02:155,6,0	1/1:1,0:1:3.01:48,3,0	0/0:9,0:9:12.04:0,12,214	0/0:6,0:6:6.02:0,6,110	0/0:4,0:4:12.04:0,12,201	0/0:9,0:9:21.07:0,21,383	1/1:1,0:1:3.01:77,3,0	0/0:9,0:9:24.08:0,24,426	0/0:12,0:12:3.01:0,3,49	0/0:4,0:4:9.03:0,9,152	0/0:5,0:5:9.03:0,9,165	0/0:11,0:11:24.89:0,25,499	0/0:2,0:2:6.02:0,6,111	0/0:9,0:9:15.05:0,15,271	0/0:7,0:7:12.04:0,12,207	1/1:4,4:8:24.08:492,24,0	0/0:8,0:8:20.61:0,21,358	0/0:8,0:8:18.05:0,18,286	0/0:14,0:14:39.13:0,39,703
chr10	74664945	.	G	GCCTCTGCCTCTA	1741.12	PASS	AB=1.000;AC=15;AF=0.300;AN=50;BaseQRankSum=2.836;DP=322;FS=2.659;HRun=0;HaplotypeScore=103.6470;InbreedingCoeff=0.8119;MQ=51.11;MQ0=4;MQRankSum=-6.625;QD=34.14;ReadPosRankSum=-0.745;VQSLOD=3.2054;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:15:27.37:730,27,0	0/0:2,0:2:6.02:0,6,223	0/0:17,0:9:15.04:0,15,266	0/0:29,0:20:37.10:0,37,1121	0/0:8,0:8:15.04:0,15,433	0/0:23,0:23:57.13:0,57,1463	0/0:10,0:10:30.08:0,30,850	0/0:16,0:16:48.10:0,48,1124	1/1:3,2:5:6.02:366,6,0	1/1:5,0:5:14.89:263,15,0	0/1:3,0:3:0:0,0,0	1/1:13,0:13:20.55:159,21,0	1/1:1,0:1:2.97:20,3,0	0/0:8,0:8:15.05:0,15,537	0/0:13,0:13:39.13:0,39,1451	./.	0/0:26,0:26:66.17:0,66,1994	0/0:24,0:24:66.14:0,66,1932	0/0:15,0:13:38.80:0,39,696	0/0:5,0:5:15.04:0,15,472	0/0:23,0:23:59.53:0,60,1625	./.	1/1:1,1:2:3.01:183,3,0	./.	1/1:2,2:5:3.01:183,3,0	0/0:12,0:12:30:0,30,739	0/0:20,0:20:60.03:0,60,1485	0/0:11,0:11:30.04:0,30,936
chr10	74665000	.	C	CT	558.18	PASS	AB=0.879;AC=14;AF=0.269;AN=52;BaseQRankSum=6.946;DP=307;FS=2.302;HRun=13;HaplotypeScore=47.8024;InbreedingCoeff=0.5477;MQ=60.78;MQ0=5;MQRankSum=-4.441;QD=7.34;ReadPosRankSum=0.757;VQSLOD=1.9640;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:22:46.87:285,47,0	0/0:1,0:1:2.98:0,3,21	0/0:10,0:5:8.84:0,9,57	0/1:11,0:8:1.68:2,0,13	0/0:9,0:10:16.87:0,17,107	0/0:13,1:14:7.85:0,8,198	0/0:10,0:9:20.82:0,21,144	0/0:26,0:26:41.48:0,41,284	1/1:3,1:3:5.96:47,6,0	0/0:0,0:2:4.07:0,4,12	0/0:0,0:3:4.07:0,4,12	1/1:5,8:13:16.06:201,16,0	1/1:0,4:5:14.81:117,15,0	0/0:11,0:11:23.78:0,24,164	0/0:11,0:10:17.83:0,18,123	./.	0/0:31,1:31:39.29:0,39,490	0/0:23,0:23:47.46:0,47,327	0/0:19,0:18:44.47:0,44,301	0/0:10,0:10:23.59:0,24,153	0/1:10,1:11:10.02:10,0,82	1/1:2,1:3:2.84:14,3,0	0/1:2,0:2:1.52:2,0,12	0/1:1,2:3:6.51:38,0,7	./.	0/0:21,0:21:47.17:0,47,318	0/0:18,0:18:41.59:0,42,284	0/0:8,0:8:23.81:0,24,164
chr10	74665013	.	T	TA	510.85	PASS	AB=1.000;AC=8;AF=0.154;AN=52;BaseQRankSum=5.275;DP=308;FS=1.675;HRun=3;HaplotypeScore=42.8898;InbreedingCoeff=0.3304;MQ=54.11;MQ0=22;MQRankSum=-3.301;QD=9.29;ReadPosRankSum=1.583;VQSLOD=1.2491;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:23:48.15:593,48,0	0/0:1,0:1:3.01:0,3,36	0/0:8,0:4:9:0,9,84	0/1:5,0:4:4.09:4,0,26	0/0:11,0:11:20.86:0,21,196	0/0:13,0:13:34.41:0,34,404	0/0:11,0:7:21.06:0,21,247	0/0:26,0:22:53.99:0,54,562	0/1:3,0:2:2.50:2,0,14	0/0:2,0:2:5.88:0,6,35	0/0:3,0:3:5.69:0,6,30	0/1:12,0:12:8.99:9,0,47	1/1:5,0:5:2.29:16,2,0	0/0:13,0:11:29.98:0,30,315	0/0:11,0:8:21:0,21,229	./.	0/0:36,1:33:46.52:0,47,905	0/0:21,0:19:53.98:0,54,574	0/0:24,0:23:62.97:0,63,648	0/0:9,0:9:18.05:0,18,214	0/0:8,0:7:7.40:0,7,103	0/0:6,0:4:8.12:0,8,43	0/0:6,0:6:11.69:0,12,83	0/1:5,0:4:0.39:0,0,45	./.	0/0:18,0:18:48.09:0,48,547	0/0:16,0:16:39.12:0,39,459	0/0:8,0:8:24.07:0,24,284
chr10	74665199	.	TG	T	1591.85	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=2.024;DP=418;FS=0.000;HRun=1;HaplotypeScore=65.9756;InbreedingCoeff=0.4520;MQ=56.47;MQ0=41;MQRankSum=-3.090;QD=7.80;ReadPosRankSum=-2.298;VQSLOD=-0.1130;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:12:21.97:143,22,0	0/1:5,0:5:17.33:17,0,25	0/0:37,0:12:18.65:0,19,177	0/0:43,0:17:19.81:0,20,184	0/1:24,0:24:8.62:9,0,308	0/1:11,0:9:8.25:8,0,68	0/0:20,0:17:40.69:0,41,304	0/0:22,0:20:47.59:0,48,432	1/1:10,0:9:23.54:195,24,0	1/1:7,0:4:9.84:75,10,0	1/1:6,0:3:8.98:73,9,0	1/1:7,0:7:14.88:117,15,0	1/1:9,0:7:18.50:180,19,0	0/0:17,0:14:23.32:0,23,217	0/0:10,0:9:2.59:0,3,106	1/1:3,0:3:9:81,9,0	0/0:20,0:18:43.44:0,43,335	0/0:10,0:8:16.52:0,17,135	0/0:23,0:15:40.33:0,40,330	0/0:9,3:9:9.48:0,9,93	0/1:9,0:8:46.14:46,0,49	1/1:1,2:3:8.94:66,9,0	1/1:10,1:11:30.10:243,30,0	1/1:16,0:15:31.88:276,32,0	1/1:6,0:6:14.97:133,15,0	0/1:22,0:19:10.26:10,0,262	0/1:22,0:21:69.20:69,0,185	0/1:16,0:14:51.97:52,0,90
chr10	74666435	.	C	CA	738.72	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.669;DP=591;FS=18.852;HRun=7;HaplotypeScore=56.5859;InbreedingCoeff=0.9372;MQ=74.18;MQ0=0;MQRankSum=-3.835;QD=28.41;ReadPosRankSum=0.676;VQSLOD=2.0233;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:69.21:834,69,0	0/0:4,0:4:9.01:0,9,87	0/0:20,0:20:44.47:0,44,431	0/0:21,0:21:40.58:0,41,443	0/0:20,0:20:48.07:0,48,463	0/0:14,0:14:39.06:0,39,377	0/0:26,0:26:66.08:0,66,630	0/0:26,0:26:60.06:0,60,566	0/0:12,0:12:33.05:0,33,319	0/0:30,0:30:87.14:0,87,840	0/0:7,0:7:18.02:0,18,174	0/0:21,0:21:63.10:0,63,608	0/0:23,0:23:63.10:0,63,608	0/0:28,0:28:81.11:0,81,776	0/0:40,0:40:99:0,108,1043	0/0:21,0:21:54.09:0,54,522	0/0:19,0:19:54.05:0,54,514	0/0:15,0:15:45.07:0,45,434	0/0:13,0:13:33.05:0,33,319	0/0:27,0:26:66.10:0,66,637	0/0:29,0:29:78.09:0,78,741	0/0:26,0:26:78.13:0,78,753	0/0:23,0:23:69.09:0,69,660	0/0:24,0:24:66.10:0,66,637	0/0:15,0:15:42.07:0,42,406	0/0:24,0:24:66.10:0,66,637	0/0:25,0:25:69.10:0,69,666	0/0:12,0:12:36.06:0,36,348
chr10	74667492	.	AGC	A	5810.84	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.951;DP=606;FS=0.777;HRun=0;HaplotypeScore=71.3086;InbreedingCoeff=0.9951;MQ=88.69;MQ0=1;MQRankSum=-2.596;QD=45.40;ReadPosRankSum=4.674;VQSLOD=5.8922;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,2154	0/0:6,0:6:18.06:0,18,365	0/0:23,0:23:68.79:0,69,1223	0/0:20,0:20:54.18:0,54,1041	0/0:20,0:20:60.19:0,60,1153	0/0:20,0:20:60.19:0,60,1170	0/0:32,0:32:96.31:0,96,1886	0/0:26,0:26:78.26:0,78,1545	1/1:0,26:26:69.24:1125,69,0	0/0:23,0:23:69.23:0,69,1371	0/0:12,0:12:36.12:0,36,730	1/1:0,20:20:57.19:930,57,0	1/1:0,17:17:45.15:732,45,0	0/0:27,0:27:81.26:0,81,1597	0/0:25,0:25:75.20:0,75,1481	0/0:13,0:13:39.13:0,39,781	0/0:17,0:17:51.15:0,51,975	0/0:29,0:29:87.30:0,87,1767	0/0:17,0:17:51.18:0,51,1028	0/0:21,0:21:63.22:0,63,1278	0/0:34,0:33:99:0,99,1961	1/1:1,17:18:54.18:870,54,0	1/1:0,12:12:33.11:538,33,0	1/1:0,35:35:99:1615,99,0	0/0:15,0:15:45.15:0,45,914	0/0:28,0:28:84.27:0,84,1639	0/0:29,0:29:87.30:0,87,1759	0/0:5,0:5:15.05:0,15,304
chr10	74668088	.	C	CT	6994.84	PASS	AB=0.814;AC=54;AF=0.964;AN=56;BaseQRankSum=-5.338;DP=249;FS=29.779;HRun=2;HaplotypeScore=92.7644;InbreedingCoeff=-0.0604;MQ=67.89;MQ0=1;MQRankSum=-2.823;QD=28.09;ReadPosRankSum=3.845;VQSLOD=3.0790;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,12:19:31.66:496,32,0	1/1:0,1:1:3.01:43,3,0	0/1:7,2:7:8.25:100,0,8	0/1:13,3:15:88.02:105,0,88	1/1:4,6:10:14.96:168,15,0	1/1:2,10:12:5.53:362,6,0	1/1:5,6:11:29.86:325,30,0	1/1:3,21:24:66.22:943,66,0	1/1:2,6:8:24.07:315,24,0	1/1:0,5:5:15.05:213,15,0	1/1:3,4:7:15.01:186,15,0	1/1:1,6:7:18.06:258,18,0	1/1:1,6:7:18.06:258,18,0	1/1:5,6:11:24.02:301,24,0	1/1:0,3:3:9.03:129,9,0	1/1:1,3:4:12.01:146,12,0	1/1:4,6:10:11.13:249,11,0	1/1:2,4:6:12.04:172,12,0	1/1:5,6:11:24.02:289,24,0	1/1:4,4:8:17.98:196,18,0	1/1:1,4:5:11.96:127,12,0	1/1:1,4:5:12:149,12,0	1/1:2,4:6:16.78:173,17,0	1/1:4,7:11:15.05:215,15,0	1/1:2,10:11:33.03:412,33,0	1/1:2,7:9:24.03:320,24,0	1/1:2,3:5:9.03:129,9,0	1/1:0,6:6:15.05:215,15,0
chr10	74668118	.	CT	C	3797.63	PASS	AC=54;AF=0.964;AN=56;BaseQRankSum=-2.426;DP=141;FS=11.120;HRun=2;HaplotypeScore=50.1533;InbreedingCoeff=0.2089;MQ=58.97;MQ0=2;MQRankSum=-2.426;QD=28.55;ReadPosRankSum=1.436;VQSLOD=1.9209;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:30.05:369,30,0	1/1:1,1:2:3.01:39,3,0	1/1:5,3:4:6.02:78,6,0	0/0:8,0:6:3.11:0,3,8	1/1:0,3:3:6.02:78,6,0	1/1:1,7:8:24.08:306,24,0	1/1:1,2:3:6.02:78,6,0	1/1:3,11:12:24.08:311,24,0	1/1:0,7:7:21.07:271,21,0	1/1:1,3:4:9.03:117,9,0	1/1:1,2:3:6.02:77,6,0	1/1:0,6:6:18.06:233,18,0	1/1:0,4:4:12.04:155,12,0	1/1:0,2:2:6.02:78,6,0	1/1:0,1:1:3.01:39,3,0	1/1:0,2:2:6.02:78,6,0	1/1:0,6:6:18.06:230,18,0	1/1:2,2:4:3.01:39,3,0	1/1:2,3:3:3.01:39,3,0	1/1:0,4:4:12.04:155,12,0	1/1:1,1:2:0.47:1,0,0	1/1:0,1:1:3.01:39,3,0	1/1:1,4:5:12:136,12,0	1/1:0,7:7:8.94:79,9,0	1/1:1,9:9:27.09:349,27,0	1/1:0,6:6:18.06:233,18,0	1/1:0,4:4:12.04:155,12,0	1/1:0,1:1:3.01:39,3,0
chr10	74669562	.	CA	C	4316.18	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=13.261;DP=527;FS=11.387;HRun=8;HaplotypeScore=50.7832;InbreedingCoeff=0.9309;MQ=71.72;MQ0=0;MQRankSum=1.549;QD=21.47;ReadPosRankSum=2.349;VQSLOD=4.2790;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:22:14.84:427,15,0	0/0:8,0:8:21.06:0,21,254	0/0:11,0:10:21.94:0,22,242	0/1:9,0:9:6.69:7,0,133	0/0:22,0:22:63.19:0,63,761	0/0:12,0:12:33.08:0,33,385	0/0:22,0:22:60.18:0,60,725	0/0:25,0:25:69.18:0,69,804	1/1:4,17:21:36.05:348,36,0	1/1:3,17:20:51.08:493,51,0	1/1:0,17:17:42.06:406,42,0	1/1:1,14:15:33.05:319,33,0	1/1:1,13:14:36.06:348,36,0	0/0:11,0:11:30.09:0,30,362	0/0:22,0:22:57.17:0,57,689	1/1:0,4:4:12.02:116,12,0	0/0:17,0:17:42.13:0,42,507	0/0:31,0:31:78.21:0,78,927	0/0:17,0:17:41.17:0,41,478	0/0:31,0:31:90.28:0,90,1086	0/0:11,0:11:33.10:0,33,399	1/1:5,16:21:45.06:435,45,0	1/1:1,18:19:54.09:521,54,0	1/1:2,12:14:27.04:261,27,0	1/1:1,24:25:66.11:638,66,0	0/0:29,1:30:49.26:0,49,877	0/0:33,0:33:93.26:0,93,1095	0/0:23,0:23:63.16:0,63,737
chr10	74671197	.	C	CA	2173.61	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-8.517;DP=357;FS=18.509;HRun=7;HaplotypeScore=33.9813;InbreedingCoeff=0.9471;MQ=76.09;MQ0=0;MQRankSum=-0.303;QD=24.15;ReadPosRankSum=4.240;VQSLOD=1.8299;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:17:42.13:507,42,0	0/0:6,0:6:18.03:0,18,174	0/0:10,0:10:19.66:0,20,187	0/0:9,0:9:14.22:0,14,159	0/0:29,0:29:69.07:0,69,657	0/0:16,0:16:36.06:0,36,348	0/0:9,0:9:27.04:0,27,260	0/0:38,0:38:99:0,102,965	1/1:0,6:6:18.06:217,18,0	1/1:2,4:6:9.03:109,9,0	1/1:4,9:13:27.08:326,27,0	1/1:0,2:2:6.02:72,6,0	1/1:0,4:4:12.04:145,12,0	0/0:8,0:8:21.01:0,21,197	0/0:8,0:8:21:0,21,192	1/1:2,8:10:21.06:254,21,0	0/0:18,0:18:51.06:0,51,487	0/0:10,0:10:24.04:0,24,232	0/0:25,0:25:60.17:0,60,600	0/0:10,0:10:27.04:0,27,261	0/0:13,0:13:36.04:0,36,341	1/1:1,11:12:27.08:326,27,0	1/1:2,3:5:9.03:109,9,0	1/1:0,6:6:12.04:145,12,0	1/1:3,6:9:15.05:181,15,0	0/0:18,1:19:17.84:0,18,456	0/0:24,0:24:72.10:0,72,689	0/0:15,0:15:42.07:0,42,406
chr10	74671352	.	A	ATTATTTAT	950.11	PASS	AC=8;AF=0.190;AN=42;BaseQRankSum=-1.393;DP=258;FS=2.798;HRun=0;HaplotypeScore=67.0650;InbreedingCoeff=0.7021;MQ=67.65;MQ0=1;MQRankSum=-5.135;QD=36.54;ReadPosRankSum=-0.148;VQSLOD=2.7054;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:18.06:666,18,0	0/0:4,0:5:9.03:0,9,209	0/0:9,0:6:3.01:0,3,77	0/0:5,0:4:6.02:0,6,74	0/0:25,0:23:45.14:0,45,1060	0/0:15,0:15:33.10:0,33,733	0/0:8,0:8:18.06:0,18,461	0/0:31,0:31:45.15:0,45,945	./.	1/1:4,2:6:6.02:249,6,0	./.	./.	./.	0/0:7,0:7:15.04:0,15,332	0/0:5,0:5:9.01:0,9,138	1/1:1,2:3:3.01:124,3,0	0/0:20,0:20:48.14:0,48,1174	0/0:12,0:12:24.08:0,24,531	0/0:16,0:16:15.05:0,15,383	0/0:7,0:7:15.05:0,15,370	0/0:9,0:9:6.02:0,6,154	./.	./.	./.	1/1:4,0:4:3.01:35,3,0	0/0:13,0:13:18.06:0,18,420	0/0:17,0:16:33.09:0,33,715	0/0:18,0:18:30.10:0,30,768
chr10	74671361	.	T	TTATTTATC	920.04	PASS	AB=1.000;AC=5;AF=0.100;AN=50;BaseQRankSum=-0.389;DP=254;FS=1.207;HRun=0;HaplotypeScore=63.3251;InbreedingCoeff=0.2418;MQ=67.41;MQ0=1;MQRankSum=-4.190;QD=29.68;ReadPosRankSum=1.827;VQSLOD=3.1116;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:16:18.06:774,18,0	0/0:5,0:5:15.03:0,15,276	0/0:7,0:4:5.13:0,5,117	0/0:6,0:5:8.89:0,9,120	0/0:21,0:20:57.16:0,57,1284	0/0:14,0:14:39.11:0,39,903	0/0:7,0:7:21.06:0,21,518	0/0:31,0:31:90.22:0,90,1590	0/0:4,0:4:8.97:0,9,72	0/1:7,0:7:80.90:160,0,81	0/0:3,0:3:5.96:0,6,44	./.	0/0:3,0:3:8.98:0,9,76	0/0:6,0:6:15.05:0,15,380	0/0:6,0:6:18.04:0,18,280	0/1:4,0:4:38.96:95,0,39	0/0:18,0:18:51.16:0,51,1300	0/0:12,0:12:30.07:0,30,666	0/0:17,0:17:39.04:0,39,621	0/0:7,0:7:18.02:0,18,428	0/0:7,0:7:12.02:0,12,214	./.	./.	0/0:1,0:1:3:0,3,27	0/1:4,0:4:3.35:3,0,48	0/0:12,0:12:33.08:0,33,614	0/0:14,0:13:36.11:0,36,860	0/0:18,0:18:33.10:0,33,843
chr10	74671679	.	T	TA	352.69	PASS	AB=0.926;AC=20;AF=0.357;AN=56;BaseQRankSum=5.425;DP=364;FS=7.467;HRun=14;HaplotypeScore=87.9312;InbreedingCoeff=0.6306;MQ=76.47;MQ0=2;MQRankSum=-5.472;QD=3.33;ReadPosRankSum=-2.506;VQSLOD=0.0756;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:9:5.77:31,6,0	0/0:7,0:7:17.74:0,18,115	0/0:25,1:16:5.39:0,5,38	0/0:17,0:14:11.43:0,11,73	0/0:18,0:21:35.59:0,36,209	0/0:18,0:17:26.39:0,26,170	0/0:17,0:17:14.96:0,15,223	0/0:27,1:30:31.96:0,32,308	1/1:8,1:9:5.65:45,6,0	1/1:7,0:11:19.67:107,20,0	1/1:8,0:10:14.40:108,14,0	0/1:3,0:3:0:0,0,0	0/1:6,1:7:4.25:19,0,4	0/0:13,0:13:17.56:0,18,114	0/0:13,0:13:14.56:0,15,96	1/1:6,0:7:8.72:50,9,0	0/0:26,0:26:38.07:0,38,249	0/0:23,1:25:18.89:0,19,235	0/0:11,0:11:14.70:0,15,94	0/1:12,1:13:6.16:6,0,94	0/0:9,0:9:20.69:0,21,135	0/0:2,0:2:3.59:0,4,10	1/1:1,1:2:2.99:24,3,0	1/1:6,4:10:9.47:80,9,0	1/1:6,0:7:9.19:52,9,0	0/1:16,2:18:11.69:12,0,62	0/0:14,0:15:23.47:0,23,153	0/0:8,0:8:11.78:0,12,77
chr10	74671929	.	A	ATTT	4214.02	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=10.570;DP=498;FS=19.404;HRun=9;HaplotypeScore=97.5796;InbreedingCoeff=0.9188;MQ=64.67;MQ0=9;MQRankSum=-8.489;QD=25.85;ReadPosRankSum=-0.584;VQSLOD=1.7133;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:25:38.98:506,39,0	0/0:10,0:10:27.08:0,27,337	0/0:17,0:11:11.86:0,12,146	0/1:9,0:7:12.92:13,0,35	0/0:22,0:22:54.15:0,54,681	0/0:16,0:16:39.11:0,39,493	0/0:18,0:18:39.01:0,39,475	0/0:31,0:30:72.18:0,72,895	1/1:1,9:12:27.07:461,27,0	1/1:5,0:12:24.04:293,24,0	1/1:9,0:15:30.05:382,30,0	1/1:1,7:8:20.78:330,21,0	1/1:5,9:16:24.06:411,24,0	0/0:17,0:16:29.73:0,30,362	0/0:18,0:18:39.10:0,39,489	1/1:3,0:8:18.06:271,18,0	0/0:40,0:40:86.20:0,86,1147	0/0:31,0:30:40.29:0,40,699	0/0:27,0:27:60.13:0,60,756	0/0:13,0:14:34.78:0,35,446	0/0:20,0:21:52.71:0,53,665	1/1:1,5:7:15.01:257,15,0	1/1:0,8:7:18.06:355,18,0	1/1:1,13:15:27.07:496,27,0	1/1:7,0:18:35.31:439,35,0	0/0:21,0:21:48.14:0,48,606	0/0:16,0:16:45.14:0,45,559	0/0:16,0:16:35.42:0,35,454
chr10	74673606	.	AAG	A	1626.14	PASS	AB=0.883;AC=23;AF=0.442;AN=52;BaseQRankSum=6.826;DP=583;FS=14.407;HRun=0;HaplotypeScore=83.6636;InbreedingCoeff=-0.0235;MQ=58.54;MQ0=5;MQRankSum=1.004;QD=4.32;ReadPosRankSum=2.734;VQSLOD=0.6760;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:46:25.31:125,25,0	0/1:7,2:10:65.84:66,0,69	./.	./.	0/1:28,1:31:53.32:53,0,357	0/1:17,5:22:3.29:3,0,368	0/1:10,3:15:99:122,0,257	0/0:21,0:21:15.04:0,15,188	0/0:22,0:28:5.74:0,6,373	1/1:10,11:23:38.77:395,39,0	1/1:5,7:11:23.69:227,24,0	0/1:17,0:26:5.09:5,0,260	0/0:18,0:25:26.91:0,27,276	0/1:19,1:22:52.92:53,0,409	0/1:21,3:25:43.24:43,0,409	1/1:5,8:13:15.04:167,15,0	0/0:25,0:26:10.30:0,10,521	0/1:18,2:21:39.03:39,0,443	0/0:15,0:15:3.95:0,4,209	0/0:19,0:20:6.92:0,7,254	0/1:20,2:24:99:134,0,270	0/1:13,1:18:12.34:12,0,211	0/1:6,1:7:24.57:25,0,50	0/1:15,1:22:9.35:9,0,198	1/1:6,10:17:23.90:248,24,0	0/1:20,0:20:70.21:70,0,361	0/0:18,0:21:18.95:0,19,407	0/0:18,0:16:18.53:0,19,272
chr10	74673832	.	CTCTCTCTG	C	660.97	PASS	AB=1.000;AC=17;AF=0.327;AN=52;BaseQRankSum=4.516;DP=391;FS=33.562;HRun=0;HaplotypeScore=103.9143;InbreedingCoeff=0.7166;MQ=68.28;MQ0=7;MQRankSum=-0.496;QD=7.96;ReadPosRankSum=0.466;VQSLOD=0.4312;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:3,0:3:9.03:0,9,276	0/1:22,0:9:18.27:18,0,41	0/0:24,0:13:5.37:0,5,130	0/0:16,0:16:36.07:0,36,1086	0/0:23,0:23:28.93:0,29,1577	0/0:22,0:21:48.11:0,48,1381	0/0:28,0:28:48.16:0,48,1095	1/1:8,0:8:6.89:88,7,0	1/1:10,0:10:21:220,21,0	0/0:3,1:3:0:0,0,0	1/1:8,0:8:9.37:114,9,0	1/1:10,0:10:6.02:122,6,0	0/0:13,0:13:24.08:0,24,915	0/0:9,0:9:18.06:0,18,592	1/1:3,7:10:5.14:91,5,0	0/0:21,0:21:46.38:0,46,1733	0/0:20,0:20:45.14:0,45,1179	0/0:19,0:19:30.05:0,30,853	0/0:16,0:16:33.10:0,33,992	0/0:21,0:20:39.10:0,39,1258	1/1:1,0:1:0.47:1,0,0	./.	1/1:5,0:5:6:51,6,0	1/1:7,2:9:6.02:122,6,0	0/0:25,0:25:51.17:0,51,1775	0/0:17,0:17:48.16:0,48,1446	0/0:8,0:8:15.05:0,15,529
chr10	74673850	.	CTCTCTGTCTCTCTCTCTCTG	C	1266.54	PASS	AB=1.000;AC=17;AF=0.315;AN=54;BaseQRankSum=3.201;DP=407;FS=35.590;HRun=0;HaplotypeScore=174.4284;InbreedingCoeff=0.6012;MQ=56.98;MQ0=16;MQRankSum=-2.655;QD=14.56;ReadPosRankSum=-0.865;VQSLOD=1.0956;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:6:12.04:0,12,348	0/1:18,0:6:3:3,0,72	0/0:19,0:9:5.87:0,6,94	0/0:14,0:14:39.08:0,39,2217	0/0:22,0:21:35.93:0,36,2639	0/0:25,0:21:51.12:0,51,1835	0/0:32,0:32:80.74:0,81,1629	1/1:6,1:7:9.02:240,9,0	0/1:10,0:10:99:168,0,209	0/0:4,0:3:0.47:0,0,1	1/1:9,1:8:18.05:392,18,0	1/1:0,9:9:6.02:333,6,0	0/0:12,0:12:27.09:0,27,1673	0/0:13,0:13:33.11:0,33,1786	0/1:10,0:10:9.28:9,0,141	0/0:29,0:29:76.46:0,76,4518	0/0:24,0:23:57.18:0,57,2406	0/0:18,0:17:38.76:0,39,1415	0/0:19,0:18:39.12:0,39,2112	0/0:20,0:19:45.12:0,45,2722	1/1:3,0:3:3.48:50,3,0	1/1:2,6:8:3.01:67,3,0	1/1:4,0:3:6.01:74,6,0	1/1:8,0:8:6.02:98,6,0	0/0:22,0:21:60.21:0,60,2762	0/0:22,0:20:63.22:0,63,3025	0/0:6,0:6:15.05:0,15,589
chr10	74673882	.	GTC	G	40.78	PASS	AB=0.799;AC=5;AF=0.096;AN=52;BaseQRankSum=2.814;DP=393;FS=1.950;HRun=0;HaplotypeScore=77.1486;InbreedingCoeff=0.3461;MQ=46.64;MQ0=18;MQRankSum=-1.943;QD=0.95;ReadPosRankSum=0.372;VQSLOD=1.6926;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,1:11:0:0,0,0	0/0:5,0:5:9.03:0,9,144	./.	./.	0/0:23,0:23:48.14:0,48,764	0/0:21,0:19:39.01:0,39,585	0/0:24,0:19:42.07:0,42,666	0/0:35,0:31:78.15:0,78,1127	0/0:9,0:9:2.18:0,2,5	0/1:4,3:7:85.81:91,0,86	0/1:6,4:8:0:0,0,0	0/0:8,0:6:3.40:0,3,18	0/0:9,0:9:3.06:0,3,8	0/0:9,0:9:21.07:0,21,353	0/0:18,0:18:39.12:0,39,650	0/1:7,3:10:23.74:34,0,24	0/0:30,0:30:85.51:0,86,1291	0/0:21,0:21:42.61:0,43,707	0/0:18,0:16:44.92:0,45,589	0/0:20,0:19:36.11:0,36,594	0/0:21,0:19:36.11:0,36,591	0/1:3,0:3:0:0,0,0	0/0:9,0:9:0:0,0,0	0/0:2,0:2:0:0,0,0	0/1:10,3:13:0:0,0,0	0/0:26,0:25:59.56:0,60,957	0/0:19,0:17:54.05:0,54,811	0/0:9,0:9:20.98:0,21,235
chr10	74673890	.	GTC	G	40.38	PASS	AB=0.984;AC=14;AF=0.269;AN=52;BaseQRankSum=4.345;DP=380;FS=0.848;HRun=0;HaplotypeScore=73.0101;InbreedingCoeff=0.2456;MQ=46.04;MQ0=20;MQRankSum=0.208;QD=0.25;ReadPosRankSum=1.730;VQSLOD=1.4273;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:10:0:0,0,0	0/0:4,0:4:9.03:0,9,130	./.	./.	0/0:25,0:25:2.27:0,2,512	0/0:19,0:17:10.25:0,10,308	0/1:25,0:20:5.09:5,0,375	0/0:32,1:28:22.50:0,22,476	0/1:7,0:7:2.20:12,0,2	0/0:8,0:8:10.60:0,11,42	0/1:12,0:10:0:0,0,0	0/1:5,0:3:1.27:11,0,1	1/1:9,0:9:5.44:34,5,0	0/0:7,0:7:15.01:0,15,172	0/1:17,0:17:23.44:23,0,444	0/1:10,0:10:1.78:2,0,2	0/1:31,2:33:19.08:19,0,782	0/0:19,1:20:41.60:0,42,578	0/1:15,2:15:40.94:41,0,110	0/0:19,0:18:30.04:0,30,388	0/0:20,0:18:23.97:0,24,263	0/1:4,0:3:0:0,0,0	1/1:7,0:7:2.90:17,3,0	0/0:2,0:2:0:0,0,0	0/1:14,0:14:0:0,0,0	0/0:23,0:21:45.92:0,46,634	0/0:19,0:17:4.36:0,4,460	0/0:8,0:8:21.05:0,21,287
chr10	74673905	.	TCTCTCA	T	411.07	PASS	AB=0.944;AC=13;AF=0.232;AN=56;BaseQRankSum=6.495;DP=365;FS=0.000;HRun=0;HaplotypeScore=90.9718;InbreedingCoeff=0.6649;MQ=48.92;MQ0=16;MQRankSum=-4.029;QD=6.97;ReadPosRankSum=-1.432;VQSLOD=1.6987;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:9:0:0,0,0	0/0:4,0:4:12.02:0,12,265	0/1:2,0:2:4:4,0,24	0/0:6,0:4:11.93:0,12,92	0/0:24,0:24:49.85:0,50,1256	0/0:20,0:18:9.87:0,10,755	0/0:23,0:18:33.80:0,34,975	0/0:29,0:26:72.18:0,72,1088	1/1:5,3:8:11.97:164,12,0	0/0:9,0:9:5.99:0,6,152	0/1:10,0:8:0:0,0,0	1/1:6,0:4:5.86:80,6,0	1/1:5,3:8:11.99:181,12,0	0/0:6,0:6:18.06:0,18,419	0/0:19,0:19:45.08:0,45,1206	0/0:7,0:7:5.95:0,6,48	0/0:30,0:30:24.74:0,25,1970	0/0:20,0:20:45.15:0,45,1292	0/0:10,0:9:18.54:0,19,366	0/0:15,0:15:36.09:0,36,885	0/0:19,0:17:33.02:0,33,634	0/1:4,1:4:0:0,0,0	1/1:2,3:5:2.88:53,3,0	0/0:2,0:2:0:0,0,0	1/1:15,0:15:5.98:74,6,0	0/0:20,0:19:57.19:0,57,1505	0/0:19,0:17:53.64:0,54,1197	0/0:12,0:12:36.08:0,36,674
chr10	74673926	.	CACACAA	C	260.41	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=5.847;DP=367;FS=0.979;HRun=0;HaplotypeScore=97.6120;InbreedingCoeff=0.7226;MQ=51.70;MQ0=8;MQRankSum=-5.433;QD=4.65;ReadPosRankSum=-0.506;VQSLOD=1.5819;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:4:0:0,0,0	0/0:7,0:7:18.06:0,18,474	0/0:18,0:6:18.06:0,18,468	0/0:15,0:7:21:0,21,465	0/0:20,0:20:31.20:0,31,1460	0/0:23,0:22:54.12:0,54,1167	0/0:17,0:16:23.47:0,23,803	0/0:25,0:23:60.01:0,60,1153	1/1:7,2:9:8.76:111,9,0	1/1:7,0:7:7.97:98,8,0	0/1:7,0:5:0:0,0,0	1/1:5,2:7:3.06:68,3,0	1/1:5,0:5:5.73:41,6,0	0/0:7,0:7:19.29:0,19,416	0/0:20,0:20:45.61:0,46,1298	1/1:5,0:5:2.88:35,3,0	0/0:31,0:31:90.12:0,90,2255	0/0:17,0:17:45.12:0,45,1239	0/0:10,0:10:20.90:0,21,581	0/0:13,0:12:11.14:0,11,901	0/0:12,0:11:20.34:0,20,392	0/0:5,0:3:0:0,0,0	1/1:4,0:4:1:2,1,0	0/0:0,2:2:0:0,0,0	1/1:12,0:12:6.89:53,7,0	0/0:23,0:22:60.19:0,60,1650	0/0:23,0:21:55.62:0,56,1087	0/0:18,0:18:51.14:0,51,1388
chr10	74673928	.	CACAA	C	253.76	PASS	AB=0.889;AC=12;AF=0.214;AN=56;BaseQRankSum=5.197;DP=365;FS=0.000;HRun=0;HaplotypeScore=85.7043;InbreedingCoeff=0.6381;MQ=51.90;MQ0=8;MQRankSum=-4.804;QD=4.61;ReadPosRankSum=0.282;VQSLOD=1.4928;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:3:0:0,0,0	0/0:7,0:7:18.04:0,18,336	0/0:19,0:6:18.03:0,18,353	0/0:15,0:7:20.95:0,21,347	0/0:20,0:20:31.20:0,31,1119	0/0:23,0:22:54.11:0,54,892	0/1:16,0:15:17.22:17,0,557	0/0:25,0:23:62.38:0,62,949	1/1:9,0:9:8.75:108,9,0	1/1:5,1:6:9.22:114,9,0	0/1:5,2:5:0:0,0,0	1/1:7,0:7:3.46:34,3,0	1/1:5,0:5:5.79:62,6,0	0/0:7,0:7:19.29:0,19,320	0/0:20,0:20:45.13:0,45,954	1/1:3,2:5:4.70:61,5,0	0/0:32,0:32:90.11:0,90,1726	0/0:17,0:17:45.11:0,45,931	0/0:13,0:13:32.20:0,32,488	0/0:13,0:12:11.14:0,11,682	0/0:13,0:12:23.31:0,23,310	0/0:4,0:2:0.47:0,0,1	0/0:4,0:4:0.47:0,0,1	0/0:2,0:2:0:0,0,0	0/0:9,3:12:5.24:0,5,14	0/0:21,0:20:60.13:0,60,1216	0/0:22,0:20:40.66:0,41,795	0/0:17,0:17:51.14:0,51,1071
chr10	74673935	.	ACAC	A	195.61	PASS	AC=16;AF=0.308;AN=52;BaseQRankSum=7.767;DP=329;FS=4.464;HRun=0;HaplotypeScore=68.1088;InbreedingCoeff=0.8299;MQ=54.50;MQ0=4;MQRankSum=-6.310;QD=5.43;ReadPosRankSum=-2.279;VQSLOD=1.3597;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:7:21.07:0,21,514	0/0:20,0:7:20.43:0,20,431	0/0:15,0:7:21.07:0,21,481	0/0:17,0:17:51.18:0,51,1194	0/0:21,0:21:60.21:0,60,1456	0/0:12,0:12:33.04:0,33,639	0/0:24,0:24:71.23:0,71,860	1/1:3,4:7:14.25:91,14,0	1/1:5,0:5:7.54:32,8,0	./.	1/1:2,3:5:11.68:77,12,0	1/1:0,3:3:8.74:66,9,0	0/0:9,0:9:27.09:0,27,602	0/0:16,0:16:45.13:0,45,1049	1/1:3,0:3:1.25:3,1,0	0/0:31,0:31:93.32:0,93,2167	0/0:16,0:16:41.93:0,42,669	0/0:16,0:16:42.62:0,43,960	0/0:12,0:11:30.10:0,30,721	0/0:12,0:11:24.08:0,24,572	1/1:2,1:1:0.89:2,1,0	1/1:0,1:1:2.22:7,2,0	0/0:2,0:2:0.39:0,0,0	1/1:6,0:9:13.02:78,13,0	0/0:21,0:20:60.21:0,60,1457	0/0:20,0:19:54.16:0,54,1112	0/0:18,0:18:54.19:0,54,1313
chr10	74673939	.	AAAT	A	978.45	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.179;DP=336;FS=2.748;HRun=0;HaplotypeScore=66.2277;InbreedingCoeff=0.6062;MQ=54.36;MQ0=4;MQRankSum=1.446;QD=25.09;ReadPosRankSum=-1.168;VQSLOD=2.9043;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:3.01:0,3,49	0/0:8,0:8:24.08:0,24,478	0/0:21,0:8:12.04:0,12,164	0/0:15,0:7:8.39:0,8,126	0/0:16,0:16:30.10:0,30,565	0/0:20,0:20:57.20:0,57,1167	0/0:10,0:10:21.07:0,21,407	1/1:5,19:24:57.18:793,57,0	0/0:3,0:7:17.76:0,18,142	0/0:7,0:7:15.04:0,15,181	0/0:4,0:3:3.01:0,3,36	0/0:2,0:5:8.68:0,9,47	0/0:0,0:3:8.75:0,9,59	0/0:8,0:8:24.08:0,24,490	0/0:15,0:15:30.57:0,31,553	0/0:6,0:6:9.03:0,9,106	0/0:31,0:31:63.21:0,63,1262	1/1:6,9:15:21.07:304,21,0	0/0:14,0:14:33.11:0,33,675	0/0:13,0:12:24.06:0,24,453	0/0:11,0:10:21.07:0,21,418	0/0:2,0:1:3.01:0,3,37	0/0:0,0:1:3.01:0,3,34	0/0:3,0:3:6.02:0,6,74	0/0:13,0:16:38.92:0,39,410	0/0:23,0:23:48.16:0,48,959	0/0:17,0:16:30.10:0,30,601	0/0:18,0:18:54.19:0,54,1105
chr10	74675535	.	GAAAAAAGA	G	4221.03	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.137;DP=503;FS=1.592;HRun=0;HaplotypeScore=172.9880;InbreedingCoeff=0.9728;MQ=52.47;MQ0=9;MQRankSum=-10.432;QD=44.90;ReadPosRankSum=0.670;VQSLOD=4.7022;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:59.97:0,60,1579	0/0:10,0:9:21.07:0,21,819	0/0:6,0:4:12.04:0,12,322	0/0:9,0:3:9.03:0,9,246	0/0:24,0:24:57.53:0,58,1784	0/0:21,0:21:57.66:0,58,2271	0/0:25,0:25:63.20:0,63,2441	0/0:21,0:20:60.09:0,60,1313	1/1:4,10:14:41.10:880,41,0	0/0:19,0:19:29.77:0,30,1299	0/0:16,0:16:17.89:0,18,998	1/1:4,9:12:27.08:645,27,0	1/1:5,14:17:42.11:971,42,0	0/0:19,0:18:48.16:0,48,1855	0/0:18,0:18:47.19:0,47,1796	0/0:11,0:11:27.08:0,27,822	0/0:29,0:29:81.27:0,81,2956	0/0:24,0:23:57.19:0,57,1518	0/0:19,0:19:38.48:0,38,1857	0/0:25,0:24:66.23:0,66,2429	0/0:11,0:11:27.07:0,27,852	1/1:7,12:20:41.76:816,42,0	1/1:4,12:16:35.95:623,36,0	1/1:5,7:12:15.46:286,15,0	0/0:21,0:21:48.16:0,48,1313	0/0:25,0:24:65.99:0,66,2184	0/0:26,0:26:70.46:0,70,2435	0/0:7,0:7:15.02:0,15,378
chr10	74675542	.	GA	G	3069.02	PASS	AB=0.857;AC=27;AF=0.482;AN=56;BaseQRankSum=10.113;DP=505;FS=6.779;HRun=11;HaplotypeScore=113.9103;InbreedingCoeff=0.8938;MQ=54.20;MQ0=8;MQRankSum=-3.882;QD=11.90;ReadPosRankSum=0.740;VQSLOD=2.9184;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,18:23:50.91:418,51,0	0/0:7,0:7:18:0,18,180	0/0:7,1:5:7.67:0,8,80	0/0:9,0:3:9:0,9,87	0/0:22,0:22:42.52:0,43,420	0/0:20,0:20:57.10:0,57,595	0/0:23,0:23:59.98:0,60,621	1/1:10,16:25:47.89:391,48,0	1/1:12,2:14:33.99:158,34,0	1/1:9,13:22:41.84:338,42,0	1/1:3,16:19:41.06:341,41,0	1/1:10,2:11:26.38:128,26,0	1/1:17,3:18:43.16:215,43,0	0/0:19,1:19:20.45:0,20,413	0/0:21,0:21:57.10:0,57,581	1/1:3,8:11:17.94:148,18,0	0/0:29,0:29:75.14:0,75,785	1/1:5,19:23:50.91:419,51,0	0/0:20,1:21:35.38:0,35,505	0/0:24,0:23:55.38:0,55,578	0/0:11,0:11:24.06:0,24,256	1/1:17,2:19:34.96:186,35,0	1/1:13,2:15:30.54:183,31,0	1/1:9,1:10:10.78:55,11,0	1/1:5,14:19:35.93:295,36,0	0/1:19,4:23:19.98:20,0,403	0/0:25,0:25:40.74:0,41,559	0/0:7,0:7:9.01:0,9,88
chr10	74675570	.	AACTCCCGCCTGAGGTAGAAC	A	9083.06	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.897;DP=536;FS=0.000;HRun=0;HaplotypeScore=296.7108;InbreedingCoeff=0.9754;MQ=61.59;MQ0=0;MQRankSum=-11.294;QD=88.19;ReadPosRankSum=6.501;VQSLOD=3.3320;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.26:0,81,6130	0/0:4,0:4:12.04:0,12,593	0/0:6,0:5:14.98:0,15,340	0/0:11,0:7:11.89:0,12,548	0/0:16,0:16:48.08:0,48,3866	0/0:27,0:27:78.27:0,78,6103	0/0:33,0:33:96.31:0,96,8155	0/0:26,0:26:72.25:0,72,1903	1/1:4,15:19:27.09:1529,27,0	0/0:18,0:18:54.18:0,54,4098	0/0:21,0:21:54.19:0,54,4116	1/1:4,17:21:24.08:1349,24,0	1/1:4,15:19:42.62:2371,43,0	0/0:17,0:17:51.17:0,51,3964	0/0:21,0:21:60.21:0,60,4828	0/0:16,0:16:39.13:0,39,3694	0/0:32,0:32:93.30:0,93,7851	0/0:27,0:27:75.26:0,75,7025	0/0:21,0:21:57.20:0,57,3490	0/0:23,0:23:63.22:0,63,3916	0/0:14,0:14:39.13:0,39,3582	1/1:6,15:21:33.11:1783,33,0	1/1:4,9:13:27.09:1521,27,0	1/1:2,8:10:12:530,12,0	0/0:20,0:20:51.18:0,51,4249	0/0:18,0:18:51.16:0,51,3286	0/0:27,0:27:81.28:0,81,6634	0/0:6,0:6:18.06:0,18,959
chr10	74676493	.	C	CA	3074.85	PASS	AB=0.596;AC=41;AF=0.932;AN=44;BaseQRankSum=-4.240;DP=271;FS=30.056;HRun=2;HaplotypeScore=53.3934;InbreedingCoeff=-0.0567;MQ=84.13;MQ0=0;MQRankSum=-3.669;QD=14.17;ReadPosRankSum=1.794;VQSLOD=1.3563;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:3.01:48,3,0	1/1:0,4:4:3.01:48,3,0	0/1:5,5:11:32.05:32,0,158	0/1:7,3:16:78.91:343,0,79	1/1:0,16:17:3.48:49,3,0	./.	1/1:0,10:10:5.98:68,6,0	1/1:0,5:5:15.04:219,15,0	./.	1/1:0,7:7:21.07:333,21,0	0/1:0,9:9:0:0,0,0	./.	1/1:0,10:10:5.98:68,6,0	1/1:0,14:14:5.98:68,6,0	1/1:0,12:12:9.03:144,9,0	1/1:0,9:9:3.01:48,3,0	./.	1/1:0,9:9:18.06:288,18,0	1/1:0,12:12:33.11:528,33,0	1/1:0,15:16:12.04:182,12,0	1/1:0,8:8:6.02:96,6,0	1/1:0,9:9:3.01:48,3,0	./.	./.	1/1:0,9:9:3.01:47,3,0	1/1:0,8:8:24.08:380,24,0	1/1:0,7:7:3.01:48,3,0	1/1:0,7:7:8.94:88,9,0
chr10	74676494	.	C	CTGTTCGA	1816.50	PASS	AB=0.863;AC=54;AF=0.964;AN=56;BaseQRankSum=1.480;DP=259;FS=36.763;HRun=0;HaplotypeScore=342.9731;InbreedingCoeff=-0.0802;MQ=85.28;MQ0=0;MQRankSum=-3.883;QD=7.01;ReadPosRankSum=3.780;VQSLOD=1.4569;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:4.50:22,4,0	1/1:4,0:4:5.34:28,5,0	0/1:8,3:11:24.64:312,0,25	0/1:15,1:16:27.63:156,0,28	1/1:17,0:17:5.17:21,5,0	1/1:7,0:7:2.88:15,3,0	1/1:8,0:8:8.72:50,9,0	1/1:4,0:4:5.97:19,6,0	1/1:10,0:10:9.82:65,10,0	1/1:6,0:6:8.34:52,8,0	1/1:9,0:9:14.64:89,15,0	1/1:6,0:6:5.96:45,6,0	1/1:9,0:9:11.31:77,11,0	1/1:14,0:14:12.44:72,12,0	1/1:12,0:12:13.96:84,14,0	1/1:9,0:9:11.32:76,11,0	1/1:4,0:4:5.62:29,6,0	1/1:9,0:9:8.67:49,9,0	1/1:11,0:11:12.65:71,13,0	1/1:16,0:16:10.94:53,11,0	1/1:8,0:8:17.52:104,18,0	1/1:9,0:9:8.73:52,9,0	1/1:15,0:15:28.36:151,28,0	1/1:8,0:8:2.90:16,3,0	1/1:8,0:8:5.75:30,6,0	1/1:7,0:7:11.48:71,11,0	1/1:7,0:7:14.72:94,15,0	1/1:7,0:7:4.59:15,5,0
chr10	74683160	.	A	AT	607.79	PASS	AB=0.841;AC=16;AF=0.286;AN=56;BaseQRankSum=-2.100;DP=559;FS=1.182;HRun=15;HaplotypeScore=84.5138;InbreedingCoeff=-0.0132;MQ=74.93;MQ0=1;MQRankSum=0.306;QD=2.26;ReadPosRankSum=-1.509;VQSLOD=-0.4535;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,6:27:32.36:196,32,0	0/1:6,0:8:4.96:5,0,42	0/1:15,0:13:0.65:1,0,15	0/0:15,0:14:4.45:0,4,44	0/1:18,3:23:35.60:36,0,144	0/0:13,0:13:32.32:0,32,197	0/1:25,2:29:19.07:19,0,209	0/0:30,0:34:52.33:0,52,303	0/0:18,3:21:3.89:0,4,136	0/1:8,7:15:3:82,0,3	1/1:7,9:16:0.58:75,1,0	0/0:14,0:15:10.21:0,10,59	0/0:30,0:32:23.48:0,23,136	0/1:14,3:17:16.77:17,0,27	0/0:19,1:25:3.60:0,4,108	0/1:7,13:21:6.91:192,0,7	0/1:22,1:26:10.67:11,0,227	0/0:24,0:26:36.77:0,37,220	0/0:12,1:16:3.38:0,3,87	0/0:18,0:19:12.28:0,12,64	0/0:12,0:13:17.49:0,17,108	0/0:16,0:17:21.78:0,22,130	0/1:12,0:12:2.58:3,0,87	0/0:20,0:21:19.12:0,19,113	0/1:4,10:14:2.56:86,0,3	0/1:22,4:27:19.28:19,0,118	0/0:19,0:21:8.41:0,8,144	0/1:16,1:18:16.03:16,0,83
chr10	74683730	.	TAAAA	T	1258.13	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.353;DP=484;FS=4.848;HRun=18;HaplotypeScore=83.0881;InbreedingCoeff=0.9119;MQ=67.00;MQ0=3;MQRankSum=-2.602;QD=14.63;ReadPosRankSum=7.364;VQSLOD=0.1217;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:23:44.24:0,44,558	0/0:5,0:5:12.02:0,12,206	0/0:31,0:14:19.52:0,20,281	0/0:21,0:10:14.09:0,14,119	0/0:23,0:29:51.11:0,51,828	0/0:17,0:19:45.12:0,45,735	0/0:12,0:15:33.05:0,33,487	0/0:25,0:28:45.13:0,45,775	1/1:3,10:13:3.94:268,4,0	0/0:9,0:18:35.90:0,36,386	0/0:13,0:17:29.91:0,30,353	1/1:4,7:11:11.87:134,12,0	1/1:0,4:4:6.02:73,6,0	0/0:15,0:15:39.12:0,39,617	0/0:21,0:22:42.14:0,42,761	0/0:3,0:9:17.96:0,18,191	0/0:17,0:19:48.15:0,48,829	0/0:9,0:9:21.07:0,21,418	0/0:15,0:18:33.53:0,34,477	0/0:16,0:16:30.08:0,30,512	0/0:10,0:12:23.99:0,24,291	1/1:7,16:23:10.58:341,11,0	1/1:2,14:17:29.24:334,29,0	1/1:4,11:17:24.20:279,24,0	0/0:7,0:11:23.88:0,24,258	0/0:24,0:28:66.14:0,66,1023	0/0:21,0:24:60.19:0,60,1035	0/0:8,0:8:15.03:0,15,193
chr10	74684199	.	AAAAAACAAAAACAAAAAC	A	6870	PASS	AC=22;AF=0.423;AN=52;BaseQRankSum=10.954;DP=530;FS=3.422;HRun=0;HaplotypeScore=225.6141;InbreedingCoeff=0.8830;MQ=61.76;MQ0=3;MQRankSum=-9.233;QD=37.34;ReadPosRankSum=-0.661;VQSLOD=3.7607;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:45.15:1281,45,0	0/0:14,0:14:33.11:0,33,2595	./.	0/0:26,0:15:4.25:0,4,86	0/0:29,0:28:60.18:0,60,4389	0/0:21,0:21:48.16:0,48,3317	0/0:19,0:19:36.12:0,36,2202	0/0:21,0:21:24.07:0,24,548	1/1:4,17:21:23.66:1159,24,0	1/1:10,0:10:8.79:142,9,0	1/1:9,11:19:21.03:838,21,0	1/1:4,13:17:6.02:290,6,0	1/1:4,7:11:3.01:145,3,0	0/0:10,0:10:21.07:0,21,1077	0/0:17,0:17:33.11:0,33,1842	1/1:2,8:10:9.03:435,9,0	0/0:29,0:29:72.25:0,72,4562	0/0:18,0:18:35.14:0,35,2330	0/0:23,0:21:39.04:0,39,2407	0/0:19,0:18:33.10:0,33,1854	0/0:19,0:19:36.09:0,36,1957	1/1:5,9:14:15.01:584,15,0	1/1:4,8:12:16.38:839,16,0	1/1:11,11:22:2.80:145,3,0	1/1:12,14:26:21.07:1014,21,0	0/0:21,0:21:27.08:0,27,1681	0/0:36,0:37:78.24:0,78,4494	./.
chr10	74684226	.	AAAC	A	1355.05	PASS	AB=0.950;AC=10;AF=0.179;AN=56;BaseQRankSum=11.962;DP=547;FS=0.000;HRun=0;HaplotypeScore=99.5268;InbreedingCoeff=-0.2175;MQ=60.01;MQ0=6;MQRankSum=-9.385;QD=7.74;ReadPosRankSum=5.532;VQSLOD=2.4549;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,13:26:99:638,0,253	0/0:15,0:15:45.15:0,45,876	0/0:15,0:8:11.76:0,12,129	0/0:20,0:8:6.60:0,7,73	0/0:28,0:28:78.24:0,78,1524	0/0:23,0:22:66.22:0,66,1264	0/0:21,0:21:50.66:0,51,967	0/0:23,0:21:55.89:0,56,847	0/1:22,0:22:99:136,0,123	0/1:12,3:15:99:100,0,377	0/1:15,0:15:99:183,0,113	0/1:23,0:23:7.13:7,0,341	0/1:11,0:11:6.52:7,0,145	0/0:18,0:17:48.16:0,48,818	0/0:14,0:14:42.14:0,42,790	0/1:10,0:10:28.15:53,0,28	0/0:34,0:34:99:0,99,1870	0/0:20,0:20:51.64:0,52,963	0/0:22,0:21:63.11:0,63,1046	0/0:19,0:19:51.16:0,51,935	0/0:23,0:23:63.17:0,63,1016	0/1:15,0:15:99:118,0,133	0/1:14,0:14:99:149,0,169	0/0:24,0:24:9.29:0,9,318	0/1:24,0:24:99:106,0,259	0/0:15,0:15:45.14:0,45,808	0/0:30,0:30:74.62:0,75,1583	0/0:7,0:7:18.06:0,18,316
chr10	74684250	.	C	CA	510.02	PASS	AB=0.905;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.468;DP=642;FS=6.613;HRun=9;HaplotypeScore=99.1164;InbreedingCoeff=0.6392;MQ=68.06;MQ0=7;MQRankSum=-1.823;QD=11.33;ReadPosRankSum=-0.125;VQSLOD=2.7954;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,17:26:54.36:590,54,0	0/0:17,0:17:29.93:0,30,257	0/0:30,0:19:38.16:0,38,327	0/0:26,0:12:19.41:0,19,130	0/0:33,0:33:83.96:0,84,728	0/0:21,0:20:50.87:0,51,429	0/0:23,0:23:36.44:0,36,466	0/0:27,1:28:32.80:0,33,513	0/0:28,0:28:56.66:0,57,489	0/0:22,0:22:59.98:0,60,520	0/0:17,0:17:27.93:0,28,236	0/0:27,0:27:50.85:0,51,430	0/0:16,0:16:29.99:0,30,260	0/0:19,0:18:23.58:0,24,362	0/0:13,0:13:26.99:0,27,234	0/0:17,0:17:38.99:0,39,337	0/0:35,0:35:89.64:0,90,766	0/0:17,0:17:50.96:0,51,435	0/0:23,0:23:44.88:0,45,379	0/0:23,0:23:62.98:0,63,547	0/0:22,0:22:62.84:0,63,531	0/1:17,2:19:26.32:26,0,247	0/0:19,0:19:42.91:0,43,362	0/0:34,0:34:59.94:0,60,518	0/0:29,0:29:71.98:0,72,620	0/0:24,0:24:39.48:0,39,497	0/0:26,0:26:68.94:0,69,593	0/0:6,0:6:18:0,18,156
chr10	74685508	.	TAA	T	1397.24	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.173;DP=509;FS=34.715;HRun=13;HaplotypeScore=87.2659;InbreedingCoeff=0.8800;MQ=74.84;MQ0=0;MQRankSum=-2.538;QD=15.35;ReadPosRankSum=3.351;VQSLOD=0.1890;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:17:8.19:266,8,0	0/0:7,0:7:18.06:0,18,260	0/0:18,0:13:20.39:0,20,183	0/0:22,0:12:4.05:0,4,38	0/0:26,0:29:76.58:0,77,984	0/0:15,0:20:49.11:0,49,597	0/0:9,0:10:21.54:0,22,305	0/0:19,0:20:53.65:0,54,717	1/1:0,9:9:24.04:233,24,0	0/0:23,0:24:56.67:0,57,778	0/0:14,0:17:32.04:0,32,385	1/1:1,5:6:15.01:145,15,0	1/1:6,11:18:32.72:303,33,0	0/0:14,0:16:47.13:0,47,625	0/0:19,0:22:59.15:0,59,766	0/0:11,1:11:0.96:0,1,307	0/0:20,0:25:61.10:0,61,714	0/0:18,0:20:42.13:0,42,578	0/0:26,0:33:78.39:0,78,876	0/0:22,0:25:62.67:0,63,817	0/0:12,0:12:27.09:0,27,391	1/1:3,12:15:33:319,33,0	1/1:9,13:23:21.02:288,21,0	1/1:2,1:3:2.99:28,3,0	0/0:17,0:19:42.12:0,42,557	0/0:22,0:23:54.17:0,54,750	0/0:31,0:34:94.61:0,95,1213	0/0:6,0:8:23.04:0,23,259
chr10	74687023	.	G	GGAGGAGGAAGAAGAA	525.37	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=3.687;DP=439;FS=0.000;HRun=0;HaplotypeScore=195.1791;InbreedingCoeff=0.6405;MQ=62.35;MQ0=5;MQRankSum=-0.269;QD=25.02;ReadPosRankSum=-2.773;VQSLOD=2.2924;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,12:21:11.71:611,12,0	0/0:1,0:1:3.01:0,3,128	0/0:24,0:15:3.67:0,4,462	0/0:53,0:25:25.22:0,25,936	0/0:10,0:10:18.06:0,18,545	0/0:16,0:16:42.09:0,42,1470	0/0:24,0:24:57.14:0,57,1985	0/0:12,0:12:30.04:0,30,716	0/0:9,0:9:21.07:0,21,771	0/0:9,0:9:26.09:0,26,743	0/0:13,0:13:22.40:0,22,698	0/0:10,0:10:20.65:0,21,513	0/0:11,0:11:30.10:0,30,1035	0/0:15,0:15:24.08:0,24,948	0/0:11,0:11:33.10:0,33,1058	0/0:12,0:12:23.79:0,24,640	0/0:23,0:23:27.10:0,27,1907	0/0:16,0:16:36.12:0,36,1321	0/0:16,0:15:30.10:0,30,951	0/0:3,0:3:6.02:0,6,179	0/0:31,0:31:57.15:0,57,1803	0/0:11,0:11:21.07:0,21,659	0/0:14,0:14:25.30:0,25,905	0/0:25,0:25:56.90:0,57,1879	0/0:13,0:13:24.92:0,25,698	0/0:20,0:20:48.16:0,48,1623	0/0:15,0:15:35.32:0,35,1231	./.
chr10	74687059	.	AG	A	400.33	PASS	AB=0.655;AC=4;AF=0.074;AN=54;BaseQRankSum=1.307;DP=336;FS=1.279;HRun=5;HaplotypeScore=86.1719;InbreedingCoeff=-0.0962;MQ=66.72;MQ0=7;MQRankSum=-0.561;QD=10.01;ReadPosRankSum=2.269;VQSLOD=0.7279;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:24.08:0,24,325	0/0:1,0:1:3.01:0,3,41	0/0:30,2:12:8.72:0,9,149	0/0:42,0:21:17.50:0,17,237	0/0:6,0:6:12.04:0,12,154	0/0:12,0:12:27.09:0,27,369	0/0:16,0:16:27.05:0,27,346	0/0:12,0:12:30.04:0,30,375	0/0:8,0:7:14.82:0,15,194	0/1:1,6:7:18.80:174,0,19	0/1:6,3:9:66.66:85,0,67	0/0:10,0:10:18.90:0,19,214	0/0:8,0:8:21.07:0,21,279	0/0:10,0:10:24.02:0,24,291	0/0:9,0:9:20.98:0,21,243	0/1:2,6:8:24.28:141,0,24	0/0:15,0:15:39.10:0,39,511	0/0:10,0:10:15.05:0,15,203	0/0:9,0:8:18.06:0,18,246	0/0:2,0:2:6.02:0,6,80	0/0:19,0:18:36.12:0,36,488	0/0:12,0:12:23.77:0,24,309	0/0:12,1:13:6.34:0,6,302	0/0:18,0:18:30.01:0,30,352	0/1:11,5:16:90.29:108,0,90	0/0:11,0:10:27.07:0,27,352	0/0:9,0:9:24.08:0,24,325	./.
chr10	74687082	.	G	GA	2798.55	PASS	AC=48;AF=0.923;AN=52;BaseQRankSum=-2.357;DP=145;FS=25.093;HRun=0;HaplotypeScore=44.5646;InbreedingCoeff=0.3860;MQ=93.19;MQ0=3;MQRankSum=-5.412;QD=25.44;ReadPosRankSum=2.911;VQSLOD=2.3038;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,4:5:5.95:65,6,0	./.	0/0:21,0:11:13.44:0,13,247	0/0:13,0:11:8.12:0,8,94	1/1:0,4:4:6.02:95,6,0	1/1:0,5:5:9.03:142,9,0	1/1:0,6:6:12.04:187,12,0	1/1:1,2:3:5.99:70,6,0	1/1:1,3:3:9.03:141,9,0	1/1:0,4:4:12.04:191,12,0	1/1:1,4:5:3.90:47,4,0	1/1:1,4:5:12.03:147,12,0	1/1:0,3:3:6.02:93,6,0	1/1:2,5:6:12.03:186,12,0	1/1:1,3:3:9.03:130,9,0	1/1:0,3:3:9.03:140,9,0	1/1:0,5:5:6.02:95,6,0	1/1:0,5:4:11.99:157,12,0	1/1:1,3:3:9.03:143,9,0	1/1:0,1:1:3.01:48,3,0	1/1:0,11:11:18.53:275,19,0	1/1:1,2:3:3.48:48,3,0	1/1:1,3:4:4.37:49,4,0	1/1:1,4:5:6.02:92,6,0	1/1:1,4:5:3.01:45,3,0	1/1:0,5:4:12.04:190,12,0	1/1:1,3:4:6.86:139,7,0	./.
chr10	74687093	.	T	TG	1012.74	PASS	AB=1.000;AC=27;AF=0.900;AN=30;BaseQRankSum=-0.595;DP=79;FS=28.537;HRun=3;HaplotypeScore=40.8759;InbreedingCoeff=0.1549;MQ=88.97;MQ0=3;MQRankSum=-3.431;QD=14.89;ReadPosRankSum=0.686;VQSLOD=1.4908;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:8,0:4:7.54:0,8,61	0/1:9,0:7:25.33:34,0,25	1/1:1,3:4:6.02:66,6,0	1/1:5,3:8:11.95:116,12,0	1/1:1,7:7:15.01:180,15,0	1/1:1,2:3:6.02:84,6,0	./.	./.	./.	./.	./.	1/1:1,5:4:9.03:126,9,0	1/1:0,3:2:6.02:76,6,0	./.	1/1:2,3:5:3.01:34,3,0	./.	1/1:1,2:2:6.02:84,6,0	1/1:2,1:2:3.01:42,3,0	1/1:2,4:6:9.03:104,9,0	./.	./.	./.	./.	1/1:3,1:3:3.01:42,3,0	1/1:2,1:3:6.02:80,6,0	1/1:3,0:2:3.01:42,3,0
chr10	74687174	.	A	AG	59.71	PASS	AC=2;AF=0.067;AN=30;BaseQRankSum=3.486;DP=111;FS=0.000;HRun=0;HaplotypeScore=32.8317;InbreedingCoeff=0.3752;MQ=51.88;MQ0=32;MQRankSum=0.697;QD=11.94;ReadPosRankSum=1.813;VQSLOD=3.2382;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:2,0:2:2.97:0,3,20	0/0:22,0:4:7.86:0,8,37	0/0:8,0:3:3.01:0,3,40	0/0:13,0:7:11.55:0,12,71	0/0:1,0:1:2.96:0,3,19	0/0:2,0:1:0:0,0,0	0/0:4,0:3:8.92:0,9,62	./.	./.	./.	./.	./.	0/0:3,0:2:5.34:0,5,28	0/0:3,0:2:4.15:0,4,19	./.	./.	0/0:2,0:2:5.99:0,6,50	0/0:3,0:1:2.50:0,2,9	0/0:13,0:11:20.68:0,21,134	./.	./.	./.	./.	1/1:0,5:5:15.02:142,15,0	0/0:8,0:4:8.90:0,9,30	./.	0/0:11,0:6:14.81:0,15,99
chr10	74687198	.	G	GA	112.33	PASS	AB=1.000;AC=5;AF=0.313;AN=16;BaseQRankSum=2.202;DP=106;FS=7.160;HRun=5;HaplotypeScore=31.4648;MQ=44.86;MQ0=69;MQRankSum=-0.910;QD=8.02;ReadPosRankSum=2.202;VQSLOD=-0.4512;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:24,0:3:2.55:0,3,36	0/0:10,0:2:2.59:0,3,15	0/0:11,0:5:3.01:0,3,39	./.	0/0:5,0:1:2.04:0,2,6	./.	./.	./.	./.	./.	./.	./.	0/1:2,0:2:0:0,0,0	./.	./.	0/0:2,0:2:5.77:0,6,34	./.	./.	./.	./.	./.	./.	1/1:2,6:6:18:181,18,0	1/1:4,0:3:2.11:12,2,0	./.	./.
chr10	74687812	.	GAGA	G	514.73	PASS	AB=1.000;AC=13;AF=0.361;AN=36;BaseQRankSum=0.111;DP=162;FS=1.272;HRun=0;HaplotypeScore=26.2694;InbreedingCoeff=0.4645;MQ=38.69;MQ0=43;MQRankSum=0.455;QD=7.92;ReadPosRankSum=1.081;VQSLOD=1.8528;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:2,0:2:3.01:0,3,58	./.	./.	0/0:8,0:4:9:0,9,101	0/0:6,0:6:14.95:0,15,208	0/1:11,0:9:4.95:5,0,170	./.	0/0:1,0:1:2.94:0,3,18	0/0:6,0:2:5.94:0,6,41	0/0:3,0:1:2.92:0,3,17	0/0:1,0:1:2.96:0,3,19	0/0:0,0:1:3.01:0,3,37	0/0:1,0:1:3.01:0,3,58	./.	./.	0/0:15,0:12:33.03:0,33,542	1/1:3,0:5:2.98:21,3,0	1/1:8,3:4:9.03:119,9,0	./.	1/1:4,2:5:3.01:40,3,0	0/0:5,0:2:2.96:0,3,19	./.	./.	./.	1/1:11,5:11:24.07:302,24,0	1/1:3,3:5:6.02:76,6,0	1/1:5,4:7:6.02:80,6,0
chr10	74689260	.	GCA	G	748.56	PASS	AB=0.895;AC=24;AF=0.480;AN=50;BaseQRankSum=3.650;DP=463;FS=3.789;HRun=0;HaplotypeScore=76.8599;InbreedingCoeff=0.2644;MQ=64.73;MQ0=21;MQRankSum=1.398;QD=3.17;ReadPosRankSum=0.927;VQSLOD=1.9117;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:29:8.99:0,9,75	./.	0/0:27,0:12:0:0,0,0	./.	0/1:9,0:9:23.38:23,0,79	0/1:10,0:11:2.09:2,0,100	0/0:23,0:23:15.03:0,15,203	0/1:24,1:22:16.41:16,0,97	0/0:8,0:9:5.97:0,6,46	./.	1/1:3,0:7:11.36:56,11,0	0/0:19,0:20:15.44:0,15,140	0/0:9,0:12:14.62:0,15,109	0/1:18,3:20:62.13:62,0,323	0/1:10,0:10:11.40:11,0,247	0/1:7,0:15:3.32:75,0,3	0/1:28,5:34:49.18:49,0,627	0/0:14,0:21:12.01:0,12,117	1/1:10,0:11:5.84:42,6,0	1/1:4,4:6:9.02:98,9,0	1/1:26,11:38:31.55:272,32,0	0/0:5,0:8:2.90:0,3,26	0/1:6,0:7:0:0,0,0	0/0:27,1:29:2.77:0,3,26	1/1:3,0:6:8.52:42,9,0	1/1:11,2:12:8.81:78,9,0	1/1:7,0:8:5.85:47,6,0	1/1:8,2:10:3.01:33,3,0
chr10	74689310	.	GGGCATGACAAT	G	1576.18	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.233;DP=392;FS=15.289;HRun=0;HaplotypeScore=130.5401;InbreedingCoeff=0.8844;MQ=54.19;MQ0=3;MQRankSum=-6.821;QD=29.74;ReadPosRankSum=-2.754;VQSLOD=1.6692;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:36.12:0,36,1998	0/0:2,0:2:6.02:0,6,350	0/0:27,0:18:54.19:0,54,2879	0/0:24,0:14:42.14:0,42,2217	0/0:7,0:7:21.07:0,21,1221	0/0:10,0:10:30.10:0,30,1658	0/0:18,0:18:51.18:0,51,2950	0/0:22,0:22:66.21:0,66,3622	1/1:1,4:5:6.02:215,6,0	0/0:14,0:14:39.13:0,39,2273	0/0:7,0:7:21.07:0,21,1061	1/1:4,5:8:12.04:430,12,0	1/1:1,6:7:12.04:435,12,0	0/0:18,0:18:51.17:0,51,2636	0/0:9,0:9:27.09:0,27,1503	0/0:14,0:14:36.12:0,36,2079	0/0:30,0:30:81.25:0,81,4259	0/0:19,0:18:39.13:0,39,2133	0/0:10,0:10:30.10:0,30,1731	0/0:10,0:10:24.08:0,24,1399	0/0:45,0:45:99:0,132,7255	1/1:1,8:9:9.03:317,9,0	1/1:1,7:8:8.98:224,9,0	1/1:6,9:15:6.43:121,6,0	0/0:14,0:14:39.13:0,39,2057	0/0:13,0:13:39.13:0,39,2178	0/0:9,0:9:27.09:0,27,1572	0/0:3,0:3:9.03:0,9,525
chr10	74689437	.	TACATAC	T	176.07	PASS	AC=8;AF=0.160;AN=50;BaseQRankSum=2.839;DP=180;FS=4.092;HRun=0;HaplotypeScore=37.6948;InbreedingCoeff=0.5762;MQ=98.15;MQ0=6;MQRankSum=-0.960;QD=9.27;ReadPosRankSum=-0.133;VQSLOD=1.2621;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:12.03:0,12,171	0/0:7,0:7:20.42:0,20,331	0/0:17,0:11:21.05:0,21,327	0/0:28,0:14:2.18:0,2,195	0/0:5,0:5:15.04:0,15,211	0/0:2,0:2:6.01:0,6,75	0/0:3,0:3:9.02:0,9,185	0/0:19,0:17:54.08:0,54,839	./.	0/0:7,0:7:18.04:0,18,283	0/0:3,0:3:6.01:0,6,75	1/1:2,0:2:6.02:99,6,0	1/1:2,0:2:3.01:50,3,0	0/0:4,0:4:12.04:0,12,190	0/0:4,0:4:12.04:0,12,319	0/0:2,0:2:5.99:0,6,50	0/0:17,0:17:42.13:0,42,921	1/1:2,11:13:6.02:123,6,0	0/0:3,0:3:9.02:0,9,123	0/0:2,0:2:6.02:0,6,100	0/0:7,0:7:12.04:0,12,199	./.	1/1:2,0:2:3:25,3,0	./.	0/0:6,0:6:15.04:0,15,227	0/0:8,0:8:18.05:0,18,263	0/0:2,0:2:6.01:0,6,124	0/0:3,0:3:9.02:0,9,139
chr10	74689443	.	CAT	C	117.82	PASS	AB=0.917;AC=8;AF=0.444;AN=18;BaseQRankSum=3.072;DP=147;FS=4.285;HRun=0;HaplotypeScore=20.6219;MQ=87.01;MQ0=6;MQRankSum=-0.467;QD=2.03;ReadPosRankSum=1.202;VQSLOD=0.7721;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,3:6:9.02:100,9,0	./.	./.	./.	./.	0/0:2,0:2:3.01:0,3,45	0/1:22,0:20:13:13,0,41	./.	0/0:4,0:4:0.47:0,0,1	./.	./.	./.	./.	0/0:5,0:5:9.01:0,9,114	./.	0/1:12,3:15:45.50:45,0,203	1/1:13,0:13:3.35:16,3,0	./.	./.	./.	./.	./.	./.	./.	./.	0/0:2,0:2:3.01:0,3,42	1/1:1,1:2:3.01:33,3,0
chr10	74689546	.	C	CAT	129.32	PASS	AB=0.714;AC=5;AF=0.167;AN=30;BaseQRankSum=-1.927;DP=125;FS=2.290;HRun=0;HaplotypeScore=32.0934;InbreedingCoeff=0.2585;MQ=65.48;MQ0=7;MQRankSum=-0.130;QD=9.95;ReadPosRankSum=-1.666;VQSLOD=2.7251;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:1,0:2:5.85:0,6,47	0/0:12,0:3:0:0,0,0	./.	0/0:1,0:1:3:0,3,25	0/0:5,0:5:9.01:0,9,95	./.	0/0:30,0:32:19.98:0,20,241	./.	1/1:0,0:1:3:27,3,0	./.	./.	./.	./.	./.	1/1:1,0:2:3:26,3,0	0/1:6,4:10:18.73:168,0,19	0/0:11,0:11:8.43:0,8,40	0/0:4,0:4:6.01:0,6,59	0/0:2,0:2:2.99:0,3,23	0/0:2,0:2:3.01:0,3,34	./.	./.	./.	./.	0/0:1,0:2:5.58:0,6,33	0/0:2,0:2:3:0,3,26	0/0:10,0:10:26.50:0,26,236
chr10	74689569	.	ATATATATATG	A	196.54	PASS	AB=0.636;AC=3;AF=0.079;AN=38;BaseQRankSum=2.158;DP=127;FS=0.000;HRun=0;HaplotypeScore=51.6476;InbreedingCoeff=0.1275;MQ=64.55;MQ0=10;MQRankSum=-1.429;QD=24.57;ReadPosRankSum=0.517;VQSLOD=2.0922;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:5.87:0,6,39	0/0:2,0:2:6.02:0,6,203	0/0:11,0:2:2.70:0,3,12	0/0:23,0:8:11.88:0,12,63	0/0:1,0:1:3.01:0,3,128	0/0:4,0:4:9.50:0,10,434	./.	0/0:34,0:34:99:0,102,2447	./.	0/0:2,0:2:6.02:0,6,122	0/0:3,0:3:9.03:0,9,224	./.	./.	./.	./.	0/0:1,0:1:3.01:0,3,143	0/0:7,0:7:21.07:0,21,838	0/1:3,4:7:47.69:257,0,48	0/0:2,0:2:6.02:0,6,257	0/0:1,0:1:3.01:0,3,126	0/0:3,0:3:6.02:0,6,205	./.	1/1:1,0:1:3:25,3,0	./.	./.	0/0:3,0:3:9.02:0,9,236	0/0:4,0:4:12.01:0,12,284	0/0:9,0:9:27.09:0,27,1153
chr10	74689659	.	C	CTAA	276.83	PASS	AB=1.000;AC=10;AF=0.192;AN=52;BaseQRankSum=5.104;DP=217;FS=0.000;HRun=0;HaplotypeScore=38.1954;InbreedingCoeff=0.5277;MQ=68.53;MQ0=0;MQRankSum=-2.989;QD=14.57;ReadPosRankSum=0.290;VQSLOD=2.5478;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.05:0,45,668	0/0:1,0:1:3.01:0,3,51	0/0:7,0:7:14.05:0,14,157	0/1:4,0:4:17.53:18,0,20	0/0:15,0:15:45.12:0,45,706	0/0:13,0:13:39.08:0,39,576	0/0:2,0:2:6.02:0,6,102	0/0:38,0:38:99:0,105,1556	1/1:0,1:1:3.01:63,3,0	0/0:7,0:7:20.99:0,21,323	0/0:9,0:9:27.06:0,27,405	./.	1/1:1,2:3:6.02:101,6,0	0/0:5,0:5:15.03:0,15,228	0/0:4,0:4:12.04:0,12,201	0/0:6,0:6:18.06:0,18,303	0/0:15,0:14:42.11:0,42,657	0/1:9,0:9:6:111,0,6	0/0:8,0:8:24.07:0,24,382	0/0:8,0:8:24.06:0,24,381	0/0:6,0:6:18.06:0,18,306	./.	1/1:0,1:1:3.01:63,3,0	1/1:0,1:1:3.01:55,3,0	0/0:7,0:7:21.07:0,21,354	0/0:12,0:12:36.10:0,36,563	0/0:15,0:15:39.12:0,39,631	0/0:4,0:4:12.04:0,12,204
chr10	74690434	.	GTGTA	G	1664.20	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=1.808;DP=532;FS=1.921;HRun=0;HaplotypeScore=95.5295;InbreedingCoeff=0.9576;MQ=56.99;MQ0=15;MQRankSum=0.257;QD=21.07;ReadPosRankSum=3.016;VQSLOD=3.1426;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:27.26:0,27,443	0/0:8,0:7:12.51:0,13,227	0/0:22,0:13:33.02:0,33,546	0/0:46,1:25:59.28:0,59,1139	0/0:22,0:21:32.12:0,32,613	0/0:17,0:17:24.08:0,24,430	0/0:20,0:20:30.08:0,30,519	0/0:29,0:27:68.28:0,68,1273	1/1:14,2:15:23.69:315,24,0	0/0:24,0:23:64.94:0,65,1272	0/0:22,0:21:33.96:0,34,549	1/1:12,0:12:32.93:457,33,0	1/1:9,1:10:19.28:276,19,0	0/0:14,0:14:27.09:0,27,437	0/0:16,0:16:27.56:0,28,466	0/0:17,0:17:46.24:0,46,808	0/0:23,0:23:46.24:0,46,672	0/0:8,0:8:7.51:0,8,58	0/0:21,0:19:57.15:0,57,1011	0/0:26,0:26:54.31:0,54,792	0/0:30,0:28:60.67:0,61,950	1/1:11,0:11:15.04:218,15,0	1/1:9,1:10:14.46:247,14,0	1/1:18,2:20:10.16:334,10,0	0/0:24,0:24:20.63:0,21,741	0/0:16,0:16:43.96:0,44,789	0/0:21,0:21:48.13:0,48,857	0/0:9,0:9:21:0,21,291
chr10	74690438	.	A	ATCTC	1366.25	PASS	AB=0.934;AC=34;AF=0.630;AN=54;BaseQRankSum=-2.116;DP=568;FS=15.782;HRun=0;HaplotypeScore=108.0948;InbreedingCoeff=-0.0390;MQ=55.46;MQ0=18;MQRankSum=-1.886;QD=3.07;ReadPosRankSum=-3.135;VQSLOD=0.4222;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:1.55:0,2,4	1/1:8,0:7:3.48:39,3,0	0/1:21,0:12:0:0,0,0	./.	0/1:22,0:21:42.87:43,0,91	1/1:13,7:20:3.48:72,3,0	0/1:12,6:19:5.54:6,0,39	1/1:34,0:32:15.43:159,15,0	0/0:17,0:16:1.62:0,2,8	0/1:26,0:26:23.88:24,0,121	0/0:22,0:21:7.04:0,7,29	0/1:15,0:15:18.67:24,0,19	1/1:12,0:11:5.89:37,6,0	1/1:15,0:15:5.69:73,6,0	1/1:10,0:16:2.74:12,3,0	0/0:19,0:19:36.55:0,37,280	0/1:23,0:23:26.32:76,0,26	1/1:8,0:8:6.02:83,6,0	0/1:22,0:20:22.23:160,0,22	0/1:28,0:28:31.64:128,0,32	0/1:23,9:31:2.63:65,0,3	1/1:13,0:13:2.94:19,3,0	1/1:11,0:11:2.99:24,3,0	0/1:21,0:21:10.17:10,0,32	0/1:24,0:24:0.35:31,0,0	1/1:14,2:17:9.03:156,9,0	0/1:15,6:25:0.24:192,0,0	1/1:10,0:9:6.02:76,6,0
chr10	74690471	.	T	TCACA	128.05	PASS	AB=0.969;AC=10;AF=0.179;AN=56;BaseQRankSum=6.116;DP=502;FS=1.877;HRun=0;HaplotypeScore=99.8310;InbreedingCoeff=-0.0238;MQ=48.91;MQ0=30;MQRankSum=-0.860;QD=0.93;ReadPosRankSum=2.964;VQSLOD=1.9046;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:7.53:0,8,73	0/0:7,0:6:11.71:0,12,152	0/0:14,0:6:15.77:0,16,209	0/0:12,0:4:9.03:0,9,169	0/0:22,0:20:32.35:0,32,550	0/0:20,0:19:3.18:0,3,221	0/0:21,0:21:33.07:0,33,516	0/0:24,0:23:62.39:0,62,851	0/1:16,0:15:23.84:24,0,186	0/0:23,0:23:60.49:0,60,879	0/0:22,0:21:33.11:0,33,537	0/1:12,5:16:46.66:47,0,294	1/1:7,0:6:5.64:65,6,0	0/0:20,0:18:21.58:0,22,404	0/0:15,0:15:24.05:0,24,348	0/0:25,0:24:72.23:0,72,1206	0/0:23,0:22:33.20:0,33,461	0/1:7,0:7:55.85:68,0,56	0/0:21,0:20:39.67:0,40,624	0/0:28,0:28:30.87:0,31,571	0/1:18,0:15:8.16:8,0,140	0/1:14,0:14:11.93:12,0,43	0/1:13,0:13:14.82:15,0,42	0/1:18,0:17:23.85:24,0,178	0/0:20,0:20:42.04:0,42,674	0/0:13,0:11:15.63:0,16,446	0/1:26,0:26:3.04:3,0,618	0/0:14,0:10:20.86:0,21,233
chr10	74690477	.	T	TCACACACACA	622.12	PASS	AB=0.990;AC=9;AF=0.161;AN=56;BaseQRankSum=1.577;DP=474;FS=6.034;HRun=0;HaplotypeScore=132.5855;InbreedingCoeff=0.3745;MQ=49.78;MQ0=25;MQRankSum=-2.416;QD=6.84;ReadPosRankSum=-0.137;VQSLOD=2.0771;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:17:12.98:88,0,13	0/0:7,0:6:12.04:0,12,346	0/0:14,0:7:21.07:0,21,526	0/0:10,0:3:6.02:0,6,186	0/0:21,0:19:36.01:0,36,998	0/0:17,0:16:21.03:0,21,564	0/0:20,0:20:33.57:0,34,945	0/0:23,0:23:22.31:0,22,1126	0/1:14,0:13:5.03:89,0,5	0/0:24,0:24:59.14:0,59,1032	0/0:23,0:23:35.86:0,36,933	1/1:16,0:14:1.46:114,1,0	1/1:5,0:5:5.75:240,6,0	0/0:20,0:18:36.12:0,36,1011	0/0:12,0:12:21.07:0,21,593	0/0:23,0:22:37.40:0,37,1661	0/0:20,0:19:31.66:0,32,867	0/1:6,0:6:67.23:185,0,67	0/0:18,0:17:45.51:0,46,921	0/0:24,0:24:37.02:0,37,938	0/0:15,0:13:9.03:0,9,201	0/0:4,7:15:0.47:0,0,1	0/1:12,0:12:0:0,0,0	0/1:18,1:18:6.34:33,0,6	0/0:21,0:21:41.96:0,42,1209	0/0:15,0:13:36.02:0,36,764	0/0:27,0:27:53.93:0,54,1242	0/0:13,0:10:21.54:0,22,608
chr10	74690479	.	TCACA	T	1841.47	PASS	AB=0.819;AC=6;AF=0.107;AN=56;BaseQRankSum=0.253;DP=500;FS=1.267;HRun=0;HaplotypeScore=94.4499;InbreedingCoeff=0.5607;MQ=52.14;MQ0=25;MQRankSum=2.082;QD=19.80;ReadPosRankSum=2.449;VQSLOD=3.4300;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:20:2.71:0,3,46	0/0:6,0:5:12.04:0,12,179	0/0:15,0:7:20.99:0,21,370	0/0:12,0:5:8.92:0,9,153	0/0:22,0:20:33.56:0,34,602	0/0:17,0:16:24.08:0,24,452	0/0:18,0:18:29.68:0,30,533	0/0:22,0:22:48.09:0,48,754	0/0:13,0:12:6.02:0,6,89	0/1:13,11:24:10.52:354,0,11	1/1:25,0:25:39.72:546,40,0	0/0:16,0:14:12.04:0,12,185	0/0:5,0:8:9.01:0,9,127	0/0:15,0:19:39.13:0,39,658	0/0:12,0:12:21.07:0,21,349	1/1:19,1:22:56.51:692,57,0	0/0:11,0:19:31.92:0,32,504	0/0:10,0:10:18.06:0,18,271	0/0:18,0:17:33.11:0,33,599	0/0:23,0:23:35.47:0,35,607	0/0:15,0:13:15.05:0,15,277	0/0:21,0:21:5.77:0,6,47	0/0:10,0:18:5.58:0,6,47	0/0:25,0:24:11.44:0,11,167	0/1:19,0:20:1.96:384,0,2	0/0:16,0:14:36.12:0,36,649	0/0:26,0:26:48.05:0,48,778	0/0:11,0:9:21.07:0,21,410
chr10	74691240	.	A	AT	340.16	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.656;DP=516;FS=0.000;HRun=7;HaplotypeScore=48.5432;InbreedingCoeff=0.9747;MQ=73.88;MQ0=0;MQRankSum=-1.140;QD=24.30;ReadPosRankSum=1.577;VQSLOD=3.7655;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.10:0,69,666	0/0:11,0:11:33.05:0,33,319	0/0:12,0:12:29.88:0,30,274	0/0:11,0:11:20.75:0,21,179	0/0:30,0:30:78.10:0,78,747	0/0:17,0:17:48.06:0,48,457	0/0:9,0:9:18.02:0,18,174	0/0:29,0:29:78.11:0,78,750	0/0:19,0:19:54.09:0,54,521	0/0:22,0:22:66.09:0,66,632	0/0:16,0:16:42.06:0,42,406	0/0:13,0:13:36.01:0,36,338	0/0:8,0:8:21.03:0,21,203	0/0:7,0:7:21.03:0,21,203	0/0:16,0:16:42.07:0,42,405	0/0:16,0:16:39.06:0,39,376	0/0:22,0:22:57.01:0,57,534	1/1:0,14:14:36.11:435,36,0	0/0:22,0:22:60.08:0,60,574	0/0:31,0:31:90.13:0,90,864	0/0:19,0:19:42.03:0,42,393	0/0:27,0:27:69.09:0,69,660	0/0:23,0:23:54.08:0,54,521	0/0:8,0:8:21.03:0,21,203	0/0:19,0:19:51.07:0,51,487	0/0:26,0:26:69.11:0,69,666	0/0:30,0:30:87.12:0,87,832	0/0:13,0:13:36.06:0,36,348
chr10	74692031	.	GCACACACATACACA	G	480.30	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=1.200;DP=541;FS=11.038;HRun=0;HaplotypeScore=192.4738;InbreedingCoeff=0.1556;MQ=68.13;MQ0=5;MQRankSum=-1.498;QD=4.18;ReadPosRankSum=0.745;VQSLOD=1.7899;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,33:38:15.65:195,16,0	0/0:11,0:11:30.05:0,30,1096	0/0:27,0:18:44.95:0,45,434	0/0:24,0:18:35.11:0,35,425	0/0:31,0:31:72.06:0,72,1979	0/0:12,0:12:33:0,33,1026	0/0:24,0:23:60.09:0,60,1465	0/0:24,0:23:54.10:0,54,1164	0/1:12,0:13:69.78:70,0,718	0/0:23,0:23:53.47:0,53,1616	0/0:16,0:16:39.09:0,39,1764	0/1:18,0:18:99:126,0,807	0/1:10,0:10:24.85:25,0,865	0/0:18,0:18:51.83:0,52,1221	0/0:19,0:19:51.06:0,51,1907	0/0:17,0:17:51.08:0,51,1826	0/0:18,0:17:48.08:0,48,2221	0/0:8,0:8:18.01:0,18,789	0/0:10,0:10:14.96:0,15,456	0/0:16,0:16:35.99:0,36,1262	0/0:40,0:40:96.10:0,96,3510	0/1:16,0:16:99:115,0,589	0/0:17,0:17:3.83:0,4,811	0/1:20,0:20:84.67:85,0,1470	0/0:14,0:13:32.99:0,33,1423	0/0:28,0:28:72.16:0,72,2743	0/0:11,0:11:20.79:0,21,377	0/0:18,0:18:39.11:0,39,1934
chr10	74692040	.	TAC	T	320.03	PASS	AB=0.948;AC=18;AF=0.346;AN=52;BaseQRankSum=3.137;DP=619;FS=2.186;HRun=0;HaplotypeScore=87.0022;InbreedingCoeff=-0.3461;MQ=61.24;MQ0=9;MQRankSum=2.226;QD=0.85;ReadPosRankSum=-0.811;VQSLOD=1.4701;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:39:2.80:13,3,0	0/1:13,0:14:3.25:3,0,146	./.	./.	0/1:24,2:27:5.96:6,0,248	0/1:17,1:18:19.21:19,0,157	0/1:14,0:24:3.93:64,0,4	0/0:21,0:20:3.59:0,4,10	0/0:14,0:14:14.47:0,14,169	0/1:28,1:29:38.33:38,0,176	0/1:14,3:18:34.74:35,0,266	0/0:22,0:22:14.54:0,15,176	0/0:16,0:16:10.57:0,11,204	0/1:26,1:27:76.72:77,0,84	0/1:20,1:21:16.60:17,0,256	0/1:20,1:21:7.81:8,0,245	0/1:25,1:24:66.46:66,0,301	0/0:8,0:15:15.46:0,15,156	0/1:9,0:9:20.30:20,0,90	0/0:15,0:15:14.56:0,15,223	0/0:43,1:43:26.59:0,27,324	0/1:25,0:25:10.10:10,0,81	0/1:21,0:21:33.72:34,0,94	0/1:24,0:24:33.92:34,0,184	0/1:17,0:17:4.53:5,0,267	0/0:32,0:32:5.60:0,6,451	0/1:14,1:15:16.81:17,0,94	0/0:19,0:19:15.55:0,16,326
chr10	74693227	.	CTTTT	C	1998.14	PASS	AB=0.670;AC=14;AF=0.250;AN=56;BaseQRankSum=3.209;DP=608;FS=3.019;HRun=17;HaplotypeScore=108.5646;InbreedingCoeff=0.7886;MQ=58.52;MQ0=5;MQRankSum=0.320;QD=11.89;ReadPosRankSum=6.269;VQSLOD=0.0760;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,1:28:61.41:61,0,67	0/0:10,0:10:14.97:0,15,240	0/0:28,0:12:13.40:0,13,167	0/0:18,0:7:6.63:0,7,18	0/0:40,0:43:85.15:0,85,1430	0/0:19,0:22:63.10:0,63,997	0/0:12,0:14:32.86:0,33,453	0/0:19,0:20:39.07:0,39,630	1/1:8,12:20:42.05:515,42,0	0/0:13,0:28:54.88:0,55,642	0/0:7,0:12:23.91:0,24,277	1/1:10,5:18:35.62:377,36,0	1/1:4,11:16:23.44:323,23,0	0/0:12,0:13:30.07:0,30,475	0/0:13,0:17:36.12:0,36,699	0/0:14,0:19:44.87:0,45,454	0/0:48,0:50:99:0,111,1991	0/1:15,1:26:13.86:43,0,14	0/0:14,0:20:48.56:0,49,835	0/0:22,0:22:46.44:0,46,599	0/0:19,0:20:43.25:0,43,698	1/1:6,10:18:24.79:264,25,0	1/1:5,10:17:17.68:237,18,0	1/1:11,14:23:22.94:370,23,0	0/0:12,0:19:30.95:0,31,361	0/0:18,0:23:50.48:0,50,697	0/0:21,0:22:55.55:0,56,784	0/0:9,0:9:27.06:0,27,478
chr10	74693241	.	TTTTC	T	991.02	PASS	AB=0.963;AC=11;AF=0.196;AN=56;BaseQRankSum=8.545;DP=597;FS=8.580;HRun=0;HaplotypeScore=109.5176;InbreedingCoeff=0.2627;MQ=52.19;MQ0=11;MQRankSum=-1.157;QD=5.90;ReadPosRankSum=4.671;VQSLOD=1.0649;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:32:42.32:42,0,146	0/0:9,0:9:20.95:0,21,224	0/0:25,0:7:13.24:0,13,88	0/0:13,0:4:1.40:0,1,5	0/0:41,0:41:82.98:0,83,1097	0/0:26,0:24:59.91:0,60,868	0/0:16,0:16:35.48:0,35,428	0/0:22,0:21:48.82:0,49,544	0/1:17,3:20:5.87:246,0,6	0/0:27,0:26:61.05:0,61,549	0/0:10,0:10:14.92:0,15,165	0/1:17,1:17:23.89:154,0,24	0/1:18,0:18:49.11:200,0,49	0/0:16,0:16:44.07:0,44,404	0/0:16,0:16:42.08:0,42,579	0/0:16,0:16:29.36:0,29,252	0/0:52,0:49:99:0,118,1709	0/1:25,0:25:48.11:96,0,48	0/0:22,0:21:56.94:0,57,746	0/0:22,0:17:39.15:0,39,455	0/0:19,0:19:28.97:0,29,524	1/1:18,1:19:0.20:146,0,0	1/1:13,0:13:5.48:95,5,0	1/1:20,1:19:0.42:151,0,0	0/0:20,0:19:29.74:0,30,284	0/0:20,0:20:18.82:0,19,597	0/0:21,0:21:33.34:0,33,535	0/0:16,0:15:37.86:0,38,482
chr10	74693685	.	TGA	T	806.98	PASS	AB=0.959;AC=20;AF=0.370;AN=54;BaseQRankSum=-2.460;DP=557;FS=1.309;HRun=0;HaplotypeScore=105.9427;InbreedingCoeff=0.1951;MQ=47.90;MQ0=19;MQRankSum=1.443;QD=2.34;ReadPosRankSum=0.366;VQSLOD=1.5095;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:25:0:0,0,0	0/0:7,0:6:8.97:0,9,88	./.	0/0:5,0:1:2.99:0,3,23	0/0:16,0:15:4.98:0,5,104	0/1:19,0:18:27.12:27,0,99	0/1:22,0:21:9.53:10,0,81	0/1:19,0:19:15.38:15,0,166	0/0:23,0:21:19.39:0,19,152	0/0:22,0:20:49.48:0,49,426	0/0:13,0:13:5.89:0,6,50	0/1:24,0:24:6.37:6,0,215	0/0:21,0:21:20.97:0,21,169	0/1:13,6:19:10.68:11,0,172	0/0:25,0:25:11.07:0,11,248	0/0:23,0:22:27.30:0,27,233	0/1:42,1:42:65.41:65,0,296	0/0:21,0:20:43.97:0,44,310	1/1:9,0:8:5.97:52,6,0	1/1:18,0:15:20.68:156,21,0	1/1:32,1:28:27.06:196,27,0	0/1:22,0:22:13.86:14,0,125	0/0:18,0:18:20.92:0,21,178	0/1:32,0:32:14.45:14,0,235	0/0:15,0:14:32.97:0,33,280	1/1:24,0:24:9.43:161,9,0	1/1:19,0:18:23.84:180,24,0	0/1:12,0:11:68.29:72,0,68
chr10	74693696	.	G	GAG	1070.59	PASS	AB=1.000;AC=13;AF=0.250;AN=52;BaseQRankSum=6.396;DP=598;FS=6.852;HRun=0;HaplotypeScore=111.6582;InbreedingCoeff=0.5723;MQ=52.81;MQ0=19;MQRankSum=-1.423;QD=6.95;ReadPosRankSum=-0.229;VQSLOD=2.8811;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:8,0:7:8.98:0,9,72	1/1:12,0:4:0.47:1,0,0	./.	0/0:19,0:18:17.75:0,18,143	0/0:20,0:19:17.89:0,18,143	0/0:23,0:23:11.44:0,11,94	0/0:20,0:20:26.12:0,26,202	0/1:23,0:21:28.18:79,0,28	1/1:18,5:21:38.92:366,39,0	1/1:14,0:14:5.98:50,6,0	0/0:25,0:25:32.78:0,33,252	0/1:22,0:22:1.98:2,0,125	0/0:20,0:20:12.27:0,12,162	0/0:25,0:25:32.83:0,33,260	1/1:23,0:22:27.01:267,27,0	0/0:41,0:40:47.15:0,47,384	0/1:19,0:19:29.28:170,0,29	0/0:12,0:11:5.90:0,6,40	0/0:19,0:15:20.70:0,21,139	0/0:34,0:29:23.60:0,24,157	0/0:19,0:19:2.79:0,3,152	0/0:20,0:20:17.93:0,18,138	0/0:37,0:36:35.67:0,36,281	1/1:18,0:17:32.97:292,33,0	0/0:24,0:24:26.48:0,26,179	0/0:21,0:19:23.46:0,23,148	0/0:13,0:12:14.91:0,15,119
chr10	74696802	.	ATCTG	A	2081.70	PASS	AB=0.882;AC=14;AF=0.250;AN=56;BaseQRankSum=5.803;DP=493;FS=0.000;HRun=0;HaplotypeScore=93.4437;InbreedingCoeff=0.5194;MQ=60.32;MQ0=0;MQRankSum=0.072;QD=14.76;ReadPosRankSum=1.353;VQSLOD=2.7303;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:27:27.21:71,0,27	0/0:10,0:10:24.08:0,24,575	0/0:20,0:16:9.81:0,10,113	0/0:14,0:12:11.99:0,12,141	0/0:15,0:15:24.05:0,24,480	0/0:19,0:19:27.08:0,27,570	0/1:10,0:10:10.05:10,0,226	0/0:28,0:28:2.17:0,2,361	1/1:7,10:17:21.07:325,21,0	0/0:11,0:19:30.08:0,30,477	0/1:4,1:15:23.74:24,0,225	1/1:7,9:16:21.07:322,21,0	1/1:6,13:19:27.09:431,27,0	0/0:23,0:23:45.15:0,45,1068	0/0:16,0:16:36.11:0,36,790	0/0:3,0:8:6.02:0,6,105	0/0:23,0:23:45.14:0,45,1007	0/0:5,0:20:30.10:0,30,524	0/0:25,0:24:21.53:0,22,452	0/0:12,0:12:21.07:0,21,499	0/0:30,0:30:3.28:0,3,1097	1/1:3,6:9:18.06:287,18,0	0/1:4,6:10:5.95:177,0,6	1/1:4,14:18:39.13:614,39,0	0/0:10,0:10:3:0,3,25	0/0:28,0:28:48.10:0,48,1034	0/0:17,0:17:3.58:0,4,456	0/0:15,0:15:33.04:0,33,689
chr10	74696830	.	GTCTGTC	G	106.44	PASS	AB=0.571;AC=1;AF=0.018;AN=56;BaseQRankSum=1.291;DP=471;FS=1.405;HRun=0;HaplotypeScore=110.5007;InbreedingCoeff=-0.0327;MQ=63.58;MQ0=2;MQRankSum=-0.819;QD=4.44;ReadPosRankSum=-2.126;VQSLOD=1.7787;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:6,18:22:34.85:181,0,35	0/0:10,0:10:30.10:0,30,972	0/0:21,0:13:13.05:0,13,430	0/0:16,0:13:35.74:0,36,497	0/0:9,0:9:27.08:0,27,758	0/0:19,0:19:48.15:0,48,1137	0/0:13,0:13:5.10:0,5,599	0/0:34,0:34:74.43:0,74,1862	0/0:15,0:15:19.30:0,19,172	0/0:12,0:12:33.10:0,33,798	0/0:13,0:13:31.44:0,31,595	0/0:13,0:12:13.85:0,14,84	0/0:20,0:20:26.26:0,26,263	0/0:24,0:24:60.21:0,60,1855	0/0:19,0:19:48.16:0,48,1362	0/0:12,0:12:24.08:0,24,436	0/0:22,0:22:54.17:0,54,1616	0/0:21,0:21:43.03:0,43,1055	0/0:19,0:18:51.17:0,51,1121	0/0:11,0:11:30.10:0,30,882	0/0:30,0:30:85.53:0,86,2294	0/0:8,0:8:10.48:0,10,63	0/0:9,0:9:13.98:0,14,123	0/0:19,0:19:23.72:0,24,139	0/0:8,0:8:18.05:0,18,272	0/0:22,0:22:63.21:0,63,1756	0/0:13,0:13:3.58:0,4,657	0/0:14,0:14:36.05:0,36,1047
chr10	74697468	.	GT	G	2538.07	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.685;DP=593;FS=0.000;HRun=9;HaplotypeScore=75.7123;InbreedingCoeff=0.9786;MQ=71.68;MQ0=0;MQRankSum=1.090;QD=21.33;ReadPosRankSum=1.771;VQSLOD=4.3852;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:30:56.95:0,57,290	0/0:7,0:7:21.06:0,21,242	0/0:25,2:23:7.29:0,7,299	0/0:32,0:28:18.28:0,18,512	0/0:23,0:23:63.16:0,63,704	0/0:14,0:14:39.12:0,39,449	0/0:11,0:11:33.09:0,33,371	0/0:24,0:24:69.21:0,69,796	1/1:1,18:19:48.03:439,48,0	0/0:32,0:32:90.21:0,90,1015	0/0:30,0:30:78.22:0,78,887	1/1:2,10:12:30.01:275,30,0	1/1:1,11:12:33.02:302,33,0	0/0:8,0:8:21.06:0,21,242	0/0:17,0:17:51.15:0,51,589	0/0:20,0:19:57.17:0,57,658	0/0:30,1:31:56.75:0,57,877	0/0:16,0:16:45.13:0,45,518	0/0:32,1:33:56.79:0,57,901	0/0:19,0:19:51.12:0,51,568	0/0:15,0:15:39.10:0,39,441	1/1:1,18:19:54.03:494,54,0	1/1:1,15:16:39.02:357,39,0	1/1:4,37:41:95.92:859,96,0	0/0:21,0:22:52.01:0,52,630	0/0:25,0:25:72.21:0,72,831	0/0:22,0:24:62.80:0,63,662	0/0:11,0:10:18.25:0,18,320
chr10	74697819	.	T	TTTAGTTAG	5815.01	PASS	AB=0.981;AC=12;AF=0.214;AN=56;BaseQRankSum=-1.907;DP=768;FS=2.443;HRun=0;HaplotypeScore=189.0628;InbreedingCoeff=0.7340;MQ=65.00;MQ0=4;MQRankSum=-9.148;QD=33.42;ReadPosRankSum=-3.399;VQSLOD=4.1093;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:84.27:0,84,2000	0/1:6,0:6:38.63:39,0,140	0/0:32,0:25:3.01:0,3,62	0/0:25,0:22:9.03:0,9,142	0/0:28,0:28:45.12:0,45,1036	0/0:17,0:17:39.12:0,39,883	0/0:32,0:32:38.81:0,39,878	0/0:33,0:33:18.05:0,18,300	0/0:31,0:31:48.14:0,48,1065	1/1:27,13:40:51.18:1817,51,0	1/1:22,11:34:36.12:1186,36,0	0/0:28,0:28:54.17:0,54,1259	0/0:30,0:30:60.21:0,60,1458	0/0:23,0:23:42.14:0,42,1039	0/0:25,0:25:48.16:0,48,1189	1/1:15,8:24:27.09:1089,27,0	0/0:28,0:28:48.15:0,48,1110	1/1:23,2:24:18.52:525,19,0	0/0:32,0:31:30.10:0,30,683	0/0:23,0:23:48.15:0,48,1103	0/0:40,0:40:66.23:0,66,1590	0/0:24,0:24:36.12:0,36,888	0/0:28,0:28:51.14:0,51,1131	0/0:30,0:30:69.22:0,69,1622	1/1:13,5:19:27.09:905,27,0	0/1:24,1:25:99:255,0,935	0/0:33,0:33:70.14:0,70,1727	0/0:6,0:6:9.03:0,9,224
chr10	74699051	.	CTAGGGT	C	927.77	PASS	AB=0.968;AC=9;AF=0.180;AN=50;BaseQRankSum=5.315;DP=810;FS=2.006;HRun=0;HaplotypeScore=143.7486;InbreedingCoeff=0.6941;MQ=58.72;MQ0=69;MQRankSum=-6.382;QD=8.36;ReadPosRankSum=-0.497;VQSLOD=2.6806;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:52:57.20:0,57,1756	0/0:12,0:10:18.04:0,18,388	./.	./.	0/0:21,0:21:18.06:0,18,478	0/0:28,0:28:33.11:0,33,1013	0/0:23,0:19:3.01:0,3,95	./.	0/0:25,0:24:39.13:0,39,894	1/1:22,6:24:18.06:356,18,0	1/1:7,5:12:15.05:292,15,0	0/0:21,0:20:36.12:0,36,757	0/0:36,0:36:42.14:0,42,1036	0/1:29,1:30:14.17:14,0,1159	0/0:28,0:27:36.12:0,36,1091	1/1:19,7:26:14.73:296,15,0	0/0:34,0:33:25.33:0,25,635	0/0:25,0:21:15.05:0,15,388	0/0:31,0:22:18.06:0,18,484	0/0:12,0:12:3.01:0,3,50	0/0:54,0:50:33.11:0,33,989	0/0:16,0:15:15.01:0,15,344	0/0:15,0:13:12.04:0,12,320	0/0:29,0:29:21.50:0,21,378	1/1:11,4:13:6.02:119,6,0	0/0:30,0:27:39.12:0,39,1160	0/0:28,0:26:24.08:0,24,714	0/0:3,0:2:3.01:0,3,95
chr10	74699165	.	AAAGG	A	1037.37	PASS	AB=0.962;AC=29;AF=0.659;AN=44;BaseQRankSum=-0.724;DP=513;FS=2.968;HRun=0;HaplotypeScore=96.0965;InbreedingCoeff=0.0569;MQ=60.43;MQ0=15;MQRankSum=-1.005;QD=3.31;ReadPosRankSum=-3.434;VQSLOD=1.1068;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,5:8:12.04:179,12,0	./.	./.	1/1:13,0:13:3.01:45,3,0	0/1:16,0:16:5.93:6,0,31	1/1:15,0:14:5.96:45,6,0	./.	0/1:17,0:20:14.66:23,0,15	1/1:28,0:27:2.86:25,3,0	0/0:9,0:13:5.92:0,6,42	0/1:11,0:13:16.97:46,0,17	./.	1/1:13,0:13:6.01:71,6,0	1/1:21,0:20:9.02:114,9,0	0/1:22,0:22:8.01:81,0,8	1/1:18,9:27:15.05:224,15,0	0/0:21,0:21:2.96:0,3,19	1/1:15,0:18:4.71:13,5,0	0/1:17,0:17:10.20:45,0,10	0/1:21,0:21:28.87:29,0,56	0/0:23,0:24:3:0,3,26	./.	0/0:19,0:20:6.39:0,6,33	1/1:11,0:11:5.95:43,6,0	0/1:28,0:27:5.15:78,0,5	1/1:8,0:12:3:27,3,0	1/1:8,0:8:6.02:80,6,0
chr10	74699225	.	GAAGGAAGA	G	1225.84	PASS	AB=0.896;AC=13;AF=0.232;AN=56;BaseQRankSum=7.299;DP=606;FS=17.396;HRun=0;HaplotypeScore=151.0409;InbreedingCoeff=0.0974;MQ=58.12;MQ0=32;MQRankSum=1.568;QD=5.60;ReadPosRankSum=-1.931;VQSLOD=0.9648;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:48.21:0,48,524	0/0:11,0:11:30:0,30,295	0/0:41,0:11:22.51:0,23,186	0/0:39,0:8:0.81:0,1,47	0/0:13,0:13:38.93:0,39,328	0/0:32,0:32:52.88:0,53,782	0/0:29,0:25:52.58:0,53,532	0/0:13,0:10:26.70:0,27,198	0/1:20,0:20:23.85:24,0,274	1/1:4,21:22:36.25:433,36,0	1/1:13,0:13:23.80:183,24,0	0/1:13,0:13:62.94:63,0,171	0/0:17,0:17:47.42:0,47,346	0/0:13,0:13:32.90:0,33,283	0/0:21,0:18:24.94:0,25,319	0/1:3,20:23:1.53:306,0,2	0/0:24,0:24:53.76:0,54,581	0/0:20,0:19:42.67:0,43,341	0/1:25,0:22:15.84:16,0,318	0/1:16,0:16:50.83:51,0,227	0/1:26,0:24:19.63:20,0,360	0/0:24,0:23:53.57:0,54,451	0/0:14,0:13:35.84:0,36,287	0/0:25,0:24:0.19:0,0,389	0/1:2,15:17:9.99:146,0,10	0/1:32,0:31:73.62:74,0,584	0/0:21,0:21:1.19:0,1,349	0/1:9,0:9:71.12:71,0,148
chr10	74699249	.	GA	G	3473.61	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.793;DP=673;FS=0.000;HRun=8;HaplotypeScore=85.4654;InbreedingCoeff=0.9615;MQ=69.73;MQ0=11;MQRankSum=-2.341;QD=24.46;ReadPosRankSum=4.009;VQSLOD=4.0953;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.21:0,90,1056	0/0:15,0:15:33.04:0,33,360	0/0:65,1:30:4.11:0,4,363	0/0:47,1:14:21.37:0,21,188	0/0:17,0:17:42.07:0,42,477	0/0:32,0:32:90.28:0,90,1085	0/0:28,0:28:63.17:0,63,736	0/0:21,0:21:57.13:0,57,646	1/1:0,25:25:66.11:636,66,0	0/0:21,0:21:48.15:0,48,577	0/0:9,0:9:24.07:0,24,289	1/1:1,14:15:36.06:347,36,0	1/1:1,19:20:51.08:492,51,0	0/0:15,0:15:45.13:0,45,531	0/0:22,0:22:60.13:0,60,679	0/0:20,0:20:11.97:0,12,104	0/0:18,0:18:41.92:0,42,479	1/1:4,15:19:42.07:405,42,0	0/0:22,1:22:54.13:0,54,611	0/0:23,0:23:63.12:0,63,702	0/0:29,0:29:78.24:0,78,935	1/1:2,21:23:60.07:571,60,0	1/1:0,15:15:42.07:405,42,0	1/1:1,24:25:35.87:619,36,0	0/0:18,0:18:11.99:0,12,128	0/0:35,0:35:93.05:0,93,1078	0/0:24,0:24:66.17:0,66,770	0/0:13,0:13:39.05:0,39,420
chr10	74700037	.	A	AGTGT	281.37	PASS	AB=0.964;AC=10;AF=0.179;AN=56;BaseQRankSum=9.108;DP=578;FS=0.644;HRun=0;HaplotypeScore=109.6285;InbreedingCoeff=-0.1666;MQ=68.49;MQ0=7;MQRankSum=-4.799;QD=1.40;ReadPosRankSum=-4.261;VQSLOD=0.7192;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,15:35:8.59:78,0,9	0/0:6,0:6:15.05:0,15,252	0/0:28,0:15:34.14:0,34,659	0/0:28,0:19:44.17:0,44,612	0/0:16,0:16:39.10:0,39,614	0/0:20,0:20:54.14:0,54,898	0/0:20,0:20:51.15:0,51,828	0/0:29,0:29:81:0,81,1351	0/1:14,0:14:35.83:36,0,257	0/0:22,0:22:22.33:0,22,600	0/0:12,0:12:35.32:0,35,412	0/1:16,0:16:62.40:62,0,200	0/1:14,0:14:10.98:11,0,361	0/0:19,0:19:39.58:0,40,628	0/0:24,0:23:60.16:0,60,987	0/1:21,0:21:0.89:1,0,503	0/0:21,0:21:39.28:0,39,991	0/1:20,0:20:94.22:94,0,410	0/0:17,0:17:48.11:0,48,757	0/0:13,0:13:33.08:0,33,491	0/0:47,0:47:99:0,108,1767	0/1:18,0:18:49.76:50,0,210	0/1:24,0:23:15.12:15,0,331	0/1:18,0:18:2.71:3,0,292	0/1:21,0:21:66.48:66,0,333	0/0:23,0:23:40.12:0,40,1003	0/0:20,0:20:60.14:0,60,984	0/0:12,0:12:33.09:0,33,571
chr10	74700039	.	A	AGTGTGTGT	2750.27	PASS	AB=0.935;AC=27;AF=0.500;AN=54;BaseQRankSum=1.948;DP=623;FS=5.086;HRun=0;HaplotypeScore=165.0947;InbreedingCoeff=0.5255;MQ=66.13;MQ0=9;MQRankSum=-3.460;QD=7.22;ReadPosRankSum=-1.149;VQSLOD=2.3878;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:38:3.27:42,3,0	0/0:5,0:5:3.01:0,3,75	0/1:27,0:14:0:0,0,0	./.	0/0:15,0:16:7.08:0,7,458	0/0:18,0:20:36.10:0,36,724	0/1:17,0:19:18.73:19,0,321	0/1:29,0:29:24.81:25,0,230	1/1:13,5:19:21.07:727,21,0	1/1:14,0:23:7.76:181,8,0	1/1:14,0:14:8.90:101,9,0	1/1:10,8:21:12.04:431,12,0	1/1:15,3:19:9.03:367,9,0	0/0:17,0:18:30.05:0,30,474	0/0:21,0:22:27.08:0,27,524	1/1:14,0:22:5.83:50,6,0	0/0:22,0:22:39.98:0,40,836	1/1:14,0:20:20.96:197,21,0	0/0:18,0:18:7.18:0,7,155	0/0:13,0:12:9.02:0,9,151	0/0:43,0:49:45.07:0,45,709	1/1:14,4:23:8.97:306,9,0	1/1:15,11:30:5.27:243,5,0	0/1:15,6:24:20.27:116,0,20	1/1:16,0:28:14.96:122,15,0	0/1:24,0:24:12.95:13,0,537	0/0:16,0:19:24.08:0,24,498	0/0:9,0:10:18.06:0,18,430
chr10	74700631	.	CTGTT	C	5921.76	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.221;DP=714;FS=1.717;HRun=0;HaplotypeScore=112.6128;InbreedingCoeff=0.9849;MQ=63.37;MQ0=2;MQRankSum=0.491;QD=27.93;ReadPosRankSum=5.294;VQSLOD=4.3606;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,33:40:36.03:1144,36,0	0/0:13,0:13:27.08:0,27,606	0/0:34,0:25:22.27:0,22,341	0/0:28,0:21:36.09:0,36,746	0/0:28,0:28:57.19:0,57,1329	0/0:27,1:28:13.89:0,14,1230	0/0:20,0:20:48.15:0,48,1073	0/0:28,0:28:48.14:0,48,975	1/1:4,18:22:39.13:641,39,0	0/0:32,0:32:49.21:0,49,1364	0/0:20,0:20:42.13:0,42,935	1/1:8,15:23:36.12:591,36,0	1/1:4,23:27:54.47:887,54,0	0/0:19,0:19:45.14:0,45,973	0/0:25,0:25:60.20:0,60,1421	0/0:22,0:22:48.14:0,48,972	0/0:27,0:27:66.20:0,66,1458	1/1:6,17:23:36.12:591,36,0	0/0:29,0:28:45.11:0,45,807	0/0:30,0:30:66.21:0,66,1498	0/0:36,1:37:31.98:0,32,1769	1/1:3,24:27:54.18:887,54,0	1/1:3,12:15:18.79:342,19,0	1/1:9,26:35:51.17:838,51,0	0/0:25,0:25:60.18:0,60,1330	0/0:29,0:29:66.20:0,66,1457	0/0:21,0:21:57.20:0,57,1393	0/0:7,0:7:9.03:0,9,220
chr10	74700946	.	TG	T	3778.53	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.807;DP=631;FS=1.744;HRun=4;HaplotypeScore=63.5612;InbreedingCoeff=0.9991;MQ=85.25;MQ0=0;MQRankSum=-1.442;QD=31.49;ReadPosRankSum=5.168;VQSLOD=3.9028;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,108,1507	0/0:13,0:13:36.12:0,36,504	0/0:15,0:15:41.79:0,42,500	0/0:24,0:24:60.11:0,60,870	0/0:21,0:21:63.21:0,63,880	0/0:28,0:28:81.27:0,81,1133	0/0:17,0:17:51.14:0,51,692	0/0:34,0:34:96.31:0,96,1329	1/1:1,16:17:45.14:540,45,0	0/0:29,0:29:81.25:0,81,1103	0/0:23,0:23:69.23:0,69,946	1/1:0,17:17:51.16:612,51,0	1/1:1,16:17:45.14:540,45,0	0/0:14,0:14:42.14:0,42,587	0/0:22,0:22:66.21:0,66,908	0/0:19,0:19:54.18:0,54,755	0/0:18,0:18:51.17:0,51,708	0/0:28,0:28:75.23:0,75,1032	0/0:27,0:27:75.23:0,75,1031	0/0:30,0:30:87.29:0,87,1217	0/0:24,0:24:69.23:0,69,965	1/1:1,22:23:63.19:756,63,0	1/1:0,23:23:57.17:684,57,0	1/1:3,20:23:54.17:647,54,0	0/0:24,0:24:69.23:0,69,965	0/0:28,0:28:84.28:0,84,1176	0/0:26,0:25:72.24:0,72,1007	0/0:7,0:7:21.07:0,21,294
chr10	74701261	.	T	TG	4648.39	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-10.485;DP=567;FS=5.966;HRun=7;HaplotypeScore=59.8136;InbreedingCoeff=0.9932;MQ=82.65;MQ0=0;MQRankSum=-1.218;QD=27.34;ReadPosRankSum=0.753;VQSLOD=5.6156;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:32:72.09:848,72,0	0/0:11,0:11:24.04:0,24,232	0/0:12,0:12:24.02:0,24,229	0/0:21,0:20:38.43:0,38,327	0/0:15,0:15:39.06:0,39,376	0/0:19,0:19:51.06:0,51,486	0/0:23,0:23:60.09:0,60,579	0/0:33,0:33:84.11:0,84,807	1/1:3,19:22:51.16:616,51,0	0/0:12,0:12:27.04:0,27,261	0/0:14,0:14:30.04:0,30,289	1/1:3,18:21:51.16:614,51,0	1/1:3,21:24:54.17:652,54,0	0/0:24,0:24:57.08:0,57,550	0/0:19,0:19:51.04:0,51,479	0/0:19,1:20:23.86:0,24,514	0/0:28,0:28:69.10:0,69,666	1/1:2,11:13:30.09:361,30,0	0/0:14,0:14:39.06:0,39,377	0/0:19,0:19:57.06:0,57,538	0/0:33,0:33:87.09:0,87,831	1/1:5,8:13:12.03:144,12,0	1/1:0,18:18:44.72:543,45,0	1/1:2,25:27:72.22:870,72,0	0/0:17,0:17:39.04:0,39,376	0/0:22,0:22:57.09:0,57,550	0/0:30,0:30:78.12:0,78,753	0/0:11,0:11:27.03:0,27,261
chr10	74704005	.	A	AT	4936.45	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=-10.117;DP=632;FS=0.714;HRun=8;HaplotypeScore=78.0746;InbreedingCoeff=0.8369;MQ=79.10;MQ0=1;MQRankSum=-0.982;QD=19.99;ReadPosRankSum=4.376;VQSLOD=4.8238;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,46:54:99:1419,123,0	0/0:10,0:10:23.98:0,24,213	0/1:30,0:20:10.80:11,0,135	0/1:26,0:16:28.83:29,0,62	0/0:18,0:18:45.02:0,45,412	0/0:19,0:19:54:0,54,489	0/0:25,0:25:56.99:0,57,510	0/0:28,0:28:68.99:0,69,613	1/1:1,16:17:42.12:485,42,0	0/0:17,0:17:42.01:0,42,382	0/0:21,0:21:54.02:0,54,492	1/1:1,11:12:27.08:312,27,0	1/1:1,20:21:45.13:519,45,0	0/0:29,0:29:75.01:0,75,682	0/0:14,0:14:42.02:0,42,384	0/0:20,0:20:54.01:0,54,490	0/0:34,0:34:58.32:0,58,773	1/1:28,1:29:73.92:469,74,0	0/0:2,0:17:29.55:0,30,89	0/0:2,0:27:48.46:0,48,154	0/0:1,0:12:22.41:0,22,66	1/1:2,13:15:39.12:450,39,0	1/1:1,23:24:60.18:688,60,0	1/1:2,17:19:48.14:554,48,0	0/0:25,0:25:71.98:0,72,650	0/0:1,0:34:67.24:0,67,212	0/0:2,0:29:48.89:0,49,144	0/0:0,0:6:12.22:0,12,36
chr10	74704013	.	T	TTA	1444.44	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=3.608;DP=624;FS=0.664;HRun=0;HaplotypeScore=102.7462;InbreedingCoeff=0.3843;MQ=75.53;MQ0=1;MQRankSum=-2.163;QD=6.54;ReadPosRankSum=6.851;VQSLOD=2.1496;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:51,0:51:18.71:45,0,19	0/0:9,0:9:26.99:0,27,342	0/0:24,0:14:15.37:0,15,181	0/1:25,0:15:35.85:36,0,123	0/0:19,0:19:56.99:0,57,747	0/0:19,0:19:57.15:0,57,792	0/0:21,0:21:63.12:0,63,819	0/0:26,0:26:78.15:0,78,987	1/1:16,0:16:18.79:44,19,0	0/0:14,0:14:42.13:0,42,594	0/0:20,0:20:60.15:0,60,815	1/1:11,0:11:11.21:23,11,0	0/1:24,0:24:18.91:19,0,34	0/0:27,0:27:81.22:0,81,1122	0/0:16,0:16:48.14:0,48,665	0/0:21,0:21:63.16:0,63,844	0/0:36,0:36:99:0,101,1350	1/1:1,31:32:75.26:1404,75,0	0/0:17,0:17:47.36:0,47,345	0/0:28,0:28:74.31:0,74,536	0/0:12,0:12:35.81:0,36,264	0/1:14,0:14:7.27:14,0,7	0/1:26,0:26:15.86:16,0,40	0/1:22,0:22:9.25:9,0,61	0/0:26,0:26:78.17:0,78,1077	0/0:35,0:35:99:0,101,730	0/0:27,0:27:71.48:0,71,522	0/0:6,0:6:17.89:0,18,130
chr10	74705474	.	AGT	A	2003.94	PASS	AB=0.900;AC=38;AF=0.731;AN=52;BaseQRankSum=6.189;DP=597;FS=0.000;HRun=0;HaplotypeScore=96.5407;InbreedingCoeff=0.5071;MQ=61.23;MQ0=6;MQRankSum=-0.458;QD=4.42;ReadPosRankSum=3.256;VQSLOD=2.0808;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:17.86:0,18,167	0/0:3,0:2:2.99:0,3,24	./.	./.	0/0:12,0:22:23.98:0,24,241	0/1:17,0:17:31.71:32,0,243	0/0:21,0:23:24.31:0,24,443	0/0:29,0:29:8.88:0,9,112	1/1:7,10:17:12.03:130,12,0	1/1:16,0:28:17.63:79,18,0	1/1:7,0:13:5.72:29,6,0	1/1:10,0:19:14.20:70,14,0	1/1:10,7:20:14.41:131,14,0	0/1:17,3:20:5.55:6,0,323	1/1:15,0:27:14.16:69,14,0	1/1:11,0:25:28.41:139,28,0	1/1:16,0:28:22.68:110,23,0	0/1:27,0:27:7.37:69,0,7	1/1:20,1:19:8.82:67,9,0	1/1:14,8:22:11.65:92,12,0	1/1:12,5:17:9.02:98,9,0	1/1:11,8:20:5.97:65,6,0	1/1:12,10:23:26.91:275,27,0	0/1:17,10:27:20.38:175,0,20	1/1:5,0:14:8.52:42,9,0	1/1:16,5:21:11.67:98,12,0	1/1:8,14:24:23.76:225,24,0	1/1:13,7:20:17.88:177,18,0
chr10	74705517	.	GTA	G	133.95	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=7.677;DP=583;FS=5.063;HRun=0;HaplotypeScore=105.0908;InbreedingCoeff=0.1729;MQ=64.61;MQ0=12;MQRankSum=-1.336;QD=1.12;ReadPosRankSum=3.097;VQSLOD=1.6082;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:41.52:0,42,422	0/0:4,0:4:9.01:0,9,118	0/0:28,0:16:34.34:0,34,396	0/0:25,0:17:37.06:0,37,384	0/0:29,0:28:53.94:0,54,540	0/0:14,0:14:25.79:0,26,444	0/0:34,0:34:63.66:0,64,862	0/0:25,0:25:68.62:0,69,578	0/1:18,0:18:21.21:21,0,75	0/0:24,0:23:55.06:0,55,404	0/0:11,0:11:17.11:0,17,130	0/0:15,0:15:23.13:0,23,140	0/1:19,0:19:2.99:3,0,118	0/0:14,0:14:23.86:0,24,393	0/0:16,0:15:21.26:0,21,122	0/0:22,0:21:46.90:0,47,277	0/0:36,0:35:73.66:0,74,504	1/1:5,19:24:15.01:168,15,0	0/0:14,0:10:16.73:0,17,154	0/0:18,0:17:7.44:0,7,152	0/0:23,0:22:29.07:0,29,336	0/0:18,0:18:11.68:0,12,181	0/1:22,0:22:39.71:40,0,64	0/0:33,0:33:12.79:0,13,336	0/0:17,0:17:28.69:0,29,202	0/0:13,0:13:19.38:0,19,224	0/1:24,0:23:13.18:13,0,146	0/1:13,0:12:16.97:17,0,82
chr10	74707359	.	TG	T	1462.74	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.784;DP=781;FS=7.040;HRun=2;HaplotypeScore=101.9017;InbreedingCoeff=0.9999;MQ=78.75;MQ0=1;MQRankSum=0.216;QD=34.02;ReadPosRankSum=2.741;VQSLOD=3.5983;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,43:43:99:1558,120,0	0/0:19,0:19:54.15:0,54,784	0/0:22,0:23:58.26:0,58,868	0/0:31,0:30:72.20:0,72,935	0/0:30,0:30:69.23:0,69,1032	0/0:20,0:20:60.16:0,60,873	0/0:30,0:30:90.26:0,90,1322	0/0:40,0:40:99:0,105,1524	0/0:24,0:24:72.24:0,72,1076	0/0:36,0:36:99:0,108,1617	0/0:18,0:18:51.17:0,51,763	0/0:27,0:27:81.21:0,81,1165	0/0:39,0:39:99:0,114,1676	0/0:25,0:25:69.23:0,69,1030	0/0:30,0:30:87.22:0,87,1254	0/0:27,0:26:81.19:0,81,1160	0/0:29,0:28:78.26:0,78,1168	0/0:14,0:14:42.14:0,42,629	0/0:42,0:41:99:0,120,1779	0/0:27,0:27:69.23:0,69,1033	0/0:29,0:29:75.25:0,75,1124	0/0:22,0:22:48.16:0,48,716	0/0:16,0:16:39.09:0,39,559	0/0:26,0:26:69.23:0,69,1034	0/0:32,0:32:93.32:0,93,1391	0/0:38,0:38:99:0,108,1617	0/0:22,0:22:66.17:0,66,944	0/0:22,0:22:66.22:0,66,989
chr10	74707461	.	TTG	T	1888.66	PASS	AB=0.861;AC=19;AF=0.339;AN=56;BaseQRankSum=8.746;DP=847;FS=83.370;HRun=0;HaplotypeScore=258.7256;InbreedingCoeff=-0.5248;MQ=43.05;MQ0=3;MQRankSum=-4.508;QD=3.10;ReadPosRankSum=0.209;VQSLOD=-0.7588;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:51.17:0,51,863	0/1:11,7:18:99:202,0,272	0/0:33,6:21:5.16:0,5,622	0/0:29,1:20:30.07:0,30,487	0/1:35,10:45:99:120,0,799	0/1:17,5:22:99:126,0,445	0/0:24,0:24:50.93:0,51,798	0/0:59,1:60:99:0,101,1972	0/1:23,2:25:20.62:21,0,674	0/1:42,14:56:99:450,0,1264	0/1:26,4:30:68.23:68,0,768	0/1:17,3:20:32.67:33,0,446	0/1:21,3:24:20.64:21,0,631	0/1:17,3:20:63.24:63,0,415	0/1:27,4:31:64.51:65,0,881	0/1:31,4:35:83.39:83,0,655	0/0:14,1:15:24.05:0,24,384	0/0:8,0:8:12.04:0,12,207	0/1:35,2:34:16.72:17,0,810	0/1:28,5:33:99:104,0,793	0/0:21,0:21:57.14:0,57,863	0/1:34,9:43:99:104,0,1025	0/1:29,5:34:99:109,0,570	0/0:17,0:17:18.06:0,18,308	0/1:49,7:56:99:152,0,1144	0/1:35,6:41:99:149,0,1054	0/1:17,5:22:99:126,0,507	0/1:15,2:17:37.62:38,0,431
chr10	74846834	.	AT	A	4216.01	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=13.074;DP=543;FS=15.483;HRun=9;HaplotypeScore=51.5325;InbreedingCoeff=0.9961;MQ=71.09;MQ0=0;MQRankSum=-2.080;QD=24.09;ReadPosRankSum=0.678;VQSLOD=4.0339;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1500	0/0:9,0:9:18.05:0,18,208	0/0:10,0:10:27.05:0,27,295	0/0:13,0:12:26.99:0,27,286	0/0:20,0:21:63:0,63,696	0/0:20,0:20:57.17:0,57,658	0/0:23,0:23:63.19:0,63,727	0/0:29,0:29:75.21:0,75,857	0/0:28,0:28:79.40:0,79,867	1/1:1,6:7:18.01:165,18,0	1/1:0,12:12:33.01:302,33,0	0/0:30,0:30:81.06:0,81,904	0/0:15,0:15:42.12:0,42,485	0/0:24,0:24:63.18:0,63,719	0/0:23,0:23:66.20:0,66,762	1/1:1,24:25:69.04:632,69,0	0/0:19,0:19:48.14:0,48,554	1/1:0,20:20:54.03:494,54,0	1/1:3,13:16:39.02:357,39,0	1/1:0,15:15:42.02:384,42,0	1/1:3,17:20:51.03:467,51,0	0/0:17,0:17:42.12:0,42,485	0/0:14,0:14:42.12:0,42,476	0/0:28,0:28:78.23:0,78,900	1/1:0,7:7:18.01:165,18,0	1/1:1,19:20:53.59:482,54,0	1/1:3,11:14:30.01:275,30,0	1/1:1,18:19:54.03:494,54,0
chr10	74847056	.	T	TTA	1087.94	PASS	AB=0.963;AC=13;AF=0.241;AN=54;BaseQRankSum=-6.119;DP=272;FS=2.628;HRun=0;HaplotypeScore=37.0553;InbreedingCoeff=0.6392;MQ=78.14;MQ0=0;MQRankSum=0.349;QD=14.90;ReadPosRankSum=-0.334;VQSLOD=3.0673;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:18:27.09:440,27,0	0/0:5,0:5:15.05:0,15,183	0/0:8,0:7:0.98:0,1,22	0/1:14,0:8:3.60:4,0,30	0/0:9,0:9:21.07:0,21,258	0/0:7,0:9:20.73:0,21,213	0/0:3,0:3:6.02:0,6,74	0/0:31,0:31:50.41:0,50,840	./.	1/1:1,6:7:15.05:243,15,0	1/1:3,6:10:15.05:245,15,0	0/1:7,1:8:24.85:25,0,234	0/0:5,0:5:12.04:0,12,146	0/0:5,0:5:6.02:0,6,73	0/0:7,0:7:18.06:0,18,222	1/1:2,4:6:6.02:98,6,0	0/0:22,0:23:60.02:0,60,714	0/0:17,0:17:48.11:0,48,574	0/0:12,0:12:30.08:0,30,358	0/0:6,0:6:12.04:0,12,148	0/0:6,0:6:15.05:0,15,184	0/0:6,0:6:12.04:0,12,148	0/0:2,0:2:6.02:0,6,74	0/1:4,0:4:0:0,0,0	1/1:1,5:6:12.04:196,12,0	0/0:11,0:11:27.08:0,27,332	0/0:19,0:19:48.14:0,48,577	0/0:13,0:13:15.03:0,15,171
chr10	74849036	.	GC	G	11499.76	PASS	AC=52;AF=1.000;AN=52;DP=374;FS=0.000;HRun=3;HaplotypeScore=62.8930;InbreedingCoeff=-0.0071;MQ=49.81;MQ0=5;QD=30.91;VQSLOD=4.4801;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:22:45.10:539,45,0	1/1:0,4:4:6.02:74,6,0	./.	./.	1/1:1,24:25:66.15:798,66,0	1/1:0,13:13:30.09:371,30,0	1/1:2,17:19:45.04:520,45,0	1/1:5,9:12:23.93:232,24,0	1/1:0,13:13:39.12:482,39,0	1/1:1,21:21:63.20:778,63,0	1/1:1,10:11:30.06:354,30,0	1/1:0,10:10:30.09:371,30,0	1/1:1,9:10:27.08:333,27,0	1/1:1,16:17:42.13:520,42,0	1/1:0,18:18:54.10:648,54,0	1/1:0,6:6:15.05:186,15,0	1/1:0,18:18:45.10:539,45,0	1/1:2,7:9:12.04:149,12,0	1/1:1,16:17:48.07:560,48,0	1/1:0,12:12:36.11:443,36,0	1/1:0,9:9:24.01:278,24,0	1/1:2,7:9:27.07:316,27,0	1/1:0,10:10:24.01:278,24,0	1/1:3,18:21:54.16:657,54,0	1/1:0,13:13:33.10:409,33,0	1/1:1,18:19:54.17:668,54,0	1/1:1,24:25:69.21:849,69,0	1/1:1,5:5:12.04:149,12,0
chr10	74850652	.	C	CT	4944.34	PASS	AB=0.974;AC=25;AF=0.446;AN=56;BaseQRankSum=-10.225;DP=562;FS=3.834;HRun=10;HaplotypeScore=65.7625;InbreedingCoeff=0.8359;MQ=68.21;MQ0=0;MQRankSum=-0.211;QD=17.29;ReadPosRankSum=0.436;VQSLOD=5.3323;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:80.82:0,81,625	0/0:9,0:9:17.96:0,18,148	0/1:20,0:11:4.61:5,0,73	0/1:14,0:11:4.91:5,0,16	0/0:13,0:13:26.94:0,27,219	0/0:21,0:21:55.73:0,56,447	0/0:12,0:12:26.96:0,27,222	0/0:26,0:26:41.32:0,41,325	0/0:17,0:17:50.94:0,51,418	1/1:16,17:33:74.29:706,74,0	1/1:3,14:17:45.07:465,45,0	0/0:24,0:24:59.82:0,60,484	0/0:15,0:16:46.98:0,47,375	0/1:11,1:12:2.03:2,0,192	0/0:26,0:26:65.50:0,66,527	1/1:4,23:27:29.62:519,30,0	0/0:30,1:31:45.79:0,46,575	1/1:1,19:21:44.95:462,45,0	1/1:10,16:26:26.31:463,26,0	1/1:4,19:23:10.85:519,11,0	1/1:6,4:10:15.03:153,15,0	0/0:8,0:9:23.01:0,23,178	0/0:21,0:21:56.87:0,57,462	0/0:20,0:20:50.90:0,51,413	1/1:0,19:19:33.08:352,33,0	1/1:4,20:25:38.29:576,38,0	1/1:2,26:28:51.13:544,51,0	1/1:1,6:8:17.91:174,18,0
chr10	74850904	.	G	GGTT	1543.93	PASS	AB=0.815;AC=19;AF=0.339;AN=56;BaseQRankSum=10.756;DP=614;FS=22.605;HRun=0;HaplotypeScore=130.9720;InbreedingCoeff=0.1893;MQ=59.86;MQ0=9;MQRankSum=-8.117;QD=5.80;ReadPosRankSum=-2.452;VQSLOD=0.7686;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,13:30:6.48:311,6,0	0/0:7,0:7:21.04:0,21,324	0/0:49,0:18:34.18:0,34,443	0/0:51,0:20:9.43:0,9,342	0/0:23,0:23:66.14:0,66,994	0/0:27,0:27:81.26:0,81,1440	0/0:15,0:15:45.08:0,45,675	0/0:28,0:28:81.22:0,81,1244	1/1:15,1:17:44.93:410,45,0	0/1:21,0:21:54.27:54,0,167	0/0:20,0:21:8.10:0,8,246	0/1:3,0:13:17.57:48,0,18	1/1:0,12:13:9.02:176,9,0	0/0:19,0:19:57.17:0,57,974	0/0:25,0:25:75.18:0,75,1228	0/1:19,0:18:62.24:62,0,127	0/0:39,0:38:99:0,114,1897	0/1:14,0:16:59.07:89,0,59	0/1:19,0:18:16.22:16,0,209	0/0:17,0:17:2.41:0,2,150	0/0:13,0:12:12.25:0,12,159	1/1:4,0:4:8.91:62,9,0	1/1:1,1:18:7.38:98,7,0	0/1:4,14:20:4.88:176,0,5	0/1:10,0:19:35.49:107,0,35	0/1:22,0:25:37.94:38,0,247	0/1:23,0:24:71.95:72,0,114	0/0:11,0:10:1.30:0,1,124
chr10	74850917	.	TTG	T	1813.22	PASS	AB=0.934;AC=18;AF=0.321;AN=56;BaseQRankSum=5.602;DP=601;FS=8.054;HRun=0;HaplotypeScore=112.7263;InbreedingCoeff=-0.0485;MQ=56.40;MQ0=10;MQRankSum=-1.614;QD=6.27;ReadPosRankSum=-6.225;VQSLOD=-0.3893;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:17.02:82,0,17	0/0:5,0:5:15.05:0,15,274	0/0:47,0:15:20.53:0,21,352	0/0:51,0:19:8.95:0,9,258	0/0:18,0:18:54.17:0,54,903	0/0:30,0:30:70.76:0,71,1542	0/0:12,0:12:36.08:0,36,568	0/0:26,0:26:69.22:0,69,1220	0/1:20,0:19:50.11:113,0,50	0/1:22,1:23:42.85:43,0,259	0/1:19,0:18:56.34:56,0,167	0/0:11,0:11:4.65:0,5,30	0/1:14,0:14:0.77:38,0,1	0/0:24,0:24:72.25:0,72,1289	0/0:23,0:23:69.24:0,69,1235	0/1:18,0:16:26.67:27,0,257	0/0:38,0:37:99:0,111,1951	0/1:15,4:19:97.22:216,0,97	0/1:16,4:19:50.34:305,0,50	1/1:9,15:23:2.18:310,2,0	1/1:8,0:7:11.10:68,11,0	0/1:6,0:6:18.15:36,0,18	1/1:18,0:18:3.33:30,3,0	0/1:18,0:16:10.59:20,0,11	0/0:20,0:20:4.13:0,4,211	0/1:21,9:28:64.49:395,0,64	0/1:17,5:20:51.04:238,0,51	0/0:4,2:5:6.77:0,7,38
chr10	74853250	.	CA	C	1209.98	PASS	AB=0.614;AC=25;AF=0.446;AN=56;BaseQRankSum=8.439;DP=471;FS=2.517;HRun=14;HaplotypeScore=72.0695;InbreedingCoeff=0.7028;MQ=75.04;MQ0=0;MQRankSum=-0.020;QD=6.51;ReadPosRankSum=3.415;VQSLOD=2.8768;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:13.47:47,13,0	0/0:8,0:10:14.02:0,14,148	0/0:24,0:13:2.99:0,3,24	0/0:19,0:11:3:0,3,25	0/0:23,0:25:47.01:0,47,446	0/0:24,1:24:40.65:0,41,492	0/0:16,2:18:24.40:0,24,346	0/0:25,2:27:36.21:0,36,452	1/1:15,0:15:18.08:51,18,0	0/0:9,0:22:40.37:0,40,241	0/0:7,1:17:17.21:0,17,201	1/1:13,0:13:14.20:40,14,0	1/1:10,0:10:18.33:52,18,0	0/0:12,1:13:3.43:0,3,170	0/0:24,0:24:57.04:0,57,521	0/0:3,0:18:42.94:0,43,242	0/0:20,2:22:3.87:0,4,316	0/1:2,7:10:1.76:124,0,2	0/1:8,9:18:20.96:154,0,21	1/1:2,6:9:16.89:109,17,0	1/1:0,8:8:20.83:144,21,0	1/1:12,0:12:16.04:45,16,0	1/1:12,0:12:18.31:52,18,0	1/1:12,0:12:18.10:51,18,0	0/0:8,0:20:24.80:0,25,165	0/1:11,15:29:57.55:215,0,58	1/1:5,12:18:34.69:232,35,0	1/1:1,5:6:14.86:103,15,0
chr10	74853262	.	AAAC	A	2379.23	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.864;DP=476;FS=2.203;HRun=0;HaplotypeScore=83.6080;InbreedingCoeff=0.9936;MQ=70.30;MQ0=0;MQRankSum=-3.636;QD=29.74;ReadPosRankSum=3.613;VQSLOD=3.6253;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,2:16:26.92:178,27,0	0/0:9,0:9:23.74:0,24,409	0/0:25,0:10:20.53:0,21,174	0/0:22,0:13:21.40:0,21,196	0/0:29,0:29:83.76:0,84,1394	0/0:30,0:29:81.14:0,81,1481	0/0:19,0:19:54.15:0,54,959	0/0:27,0:27:75.05:0,75,1350	1/1:0,10:10:27.09:408,27,0	0/0:23,0:23:65.98:0,66,979	0/0:18,0:18:51.04:0,51,818	1/1:1,10:11:26.93:349,27,0	1/1:2,8:10:27.08:370,27,0	0/0:12,0:12:33.09:0,33,559	0/0:23,0:23:69.24:0,69,1402	0/0:18,0:18:48.10:0,48,821	0/0:20,0:20:60.15:0,60,1096	0/0:9,0:9:26.81:0,27,296	0/0:18,0:18:53.31:0,53,579	0/0:11,0:11:29.67:0,30,263	0/0:10,0:10:27.04:0,27,274	1/1:2,9:11:32.93:422,33,0	1/1:0,12:12:32.97:443,33,0	1/1:0,10:10:27.09:408,27,0	0/0:21,0:21:32.73:0,33,667	0/0:28,0:28:80.84:0,81,965	0/0:19,0:18:47.31:0,47,439	0/0:5,0:5:15.04:0,15,159
chr10	74853263	.	AAC	A	1573.61	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.655;DP=467;FS=1.533;HRun=0;HaplotypeScore=76.5954;InbreedingCoeff=0.9902;MQ=69.82;MQ0=0;MQRankSum=-2.943;QD=19.67;ReadPosRankSum=4.127;VQSLOD=3.8972;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,12:16:41.28:455,41,0	0/0:7,0:7:15.83:0,16,284	0/0:23,0:9:17.65:0,18,148	0/0:21,0:13:21.37:0,21,151	0/0:27,0:27:75.83:0,76,1073	0/0:29,0:28:79.35:0,79,1157	0/0:19,0:19:54.07:0,54,747	0/0:26,0:26:74.98:0,75,1068	1/1:10,0:10:26.91:211,27,0	0/0:24,0:24:63:0,63,749	0/0:18,0:18:53.95:0,54,646	1/1:10,1:11:26.78:197,27,0	1/1:10,0:10:26.87:205,27,0	0/0:12,0:12:33:0,33,433	0/0:23,0:23:69.21:0,69,1082	0/0:19,0:19:51.08:0,51,634	0/0:20,0:20:60:0,60,856	0/0:9,0:9:23.30:0,23,170	0/0:18,0:18:30.66:0,31,369	0/0:11,0:11:25.73:0,26,177	0/0:10,0:10:26.58:0,27,173	1/1:9,2:11:32.78:248,33,0	1/1:12,0:12:32.80:246,33,0	1/1:10,0:10:26.92:211,27,0	0/0:20,0:20:49.49:0,49,548	0/0:27,0:27:73.97:0,74,642	0/0:19,0:18:30.28:0,30,279	0/0:5,0:5:14.66:0,15,87
chr10	74853387	.	TA	T	4431.28	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.406;DP=616;FS=0.392;HRun=1;HaplotypeScore=92.3153;InbreedingCoeff=0.9978;MQ=71.33;MQ0=0;MQRankSum=-4.665;QD=37.55;ReadPosRankSum=2.666;VQSLOD=5.2628;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:72.24:1007,72,0	0/0:13,0:13:39.12:0,39,594	0/0:10,0:10:29.69:0,30,435	0/0:13,0:13:28.10:0,28,532	0/0:49,0:49:99:0,144,2247	0/0:32,0:32:96.31:0,96,1512	0/0:24,0:24:72.23:0,72,1127	0/0:33,0:33:99:0,99,1519	1/1:0,18:18:48.16:674,48,0	0/0:31,0:31:93.31:0,93,1465	0/0:16,0:16:48.16:0,48,767	1/1:0,19:19:51.17:701,51,0	1/1:0,10:10:27.09:377,27,0	0/0:19,0:19:57.18:0,57,888	0/0:29,0:29:87.28:0,87,1360	0/0:21,0:21:63.21:0,63,1001	0/0:38,0:37:99:0,111,1766	0/0:17,0:17:45.15:0,45,706	0/0:19,0:18:51.17:0,51,792	0/0:29,0:29:87.25:0,87,1361	0/0:28,0:28:81.23:0,81,1262	1/1:0,12:12:27.09:379,27,0	1/1:0,18:18:48.16:673,48,0	1/1:0,16:16:45.15:621,45,0	0/0:15,0:15:33.11:0,33,527	0/0:35,0:35:99:0,105,1649	0/0:21,0:21:60.20:0,60,953	0/0:6,0:6:18.06:0,18,287
chr10	74853440	.	CAGAG	C	489.37	PASS	AB=0.917;AC=13;AF=0.232;AN=56;BaseQRankSum=7.451;DP=592;FS=0.692;HRun=0;HaplotypeScore=188.2696;InbreedingCoeff=0.5885;MQ=64.89;MQ0=3;MQRankSum=-4.043;QD=4.01;ReadPosRankSum=-1.710;VQSLOD=2.3006;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,7:21:11.44:84,0,11	0/0:11,0:11:33.09:0,33,670	0/0:31,0:20:14.43:0,14,433	0/0:34,0:17:9.98:0,10,359	0/0:38,0:38:87.04:0,87,1956	0/0:30,0:32:80.84:0,81,1788	0/0:29,0:29:66.23:0,66,1462	0/0:30,0:30:69.04:0,69,1467	1/1:9,3:12:11.83:143,12,0	0/0:24,0:24:9.25:0,9,342	0/1:13,0:13:6.85:7,0,70	1/1:10,2:12:11.57:82,12,0	1/1:10,2:12:14.32:169,14,0	0/0:26,0:26:69.24:0,69,1620	0/0:29,0:30:75.03:0,75,1766	0/1:18,0:18:3.18:3,0,123	0/0:43,0:43:81.28:0,81,2259	0/0:12,0:12:21.02:0,21,386	0/0:18,0:17:33.08:0,33,706	0/0:15,0:16:14.22:0,14,265	0/0:21,0:21:6.39:0,6,354	1/1:11,4:15:2.96:47,3,0	1/1:12,7:19:8.63:117,9,0	0/0:10,1:11:2.94:0,3,18	0/0:17,0:17:12:0,12,118	0/0:25,0:26:53.87:0,54,1105	0/0:17,0:17:30.10:0,30,661	0/0:2,0:2:6.02:0,6,121
chr10	74853448	.	G	GAGAGAC	1982.32	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=8.602;DP=570;FS=0.000;HRun=0;HaplotypeScore=192.5017;InbreedingCoeff=0.5699;MQ=60.80;MQ0=5;MQRankSum=-6.038;QD=12.87;ReadPosRankSum=0.215;VQSLOD=2.9327;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,5:20:8.93:98,9,0	0/0:12,0:12:36.07:0,36,627	0/0:37,0:19:31.07:0,31,430	0/0:40,0:16:22.75:0,23,348	0/0:35,0:35:96.23:0,96,1880	0/0:30,0:30:81.23:0,81,1688	0/0:28,0:29:72.21:0,72,1405	0/0:32,0:32:69.95:0,70,1388	1/1:5,6:12:12.04:279,12,0	0/1:21,0:21:99:406,0,145	0/1:11,0:11:25.26:25,0,72	1/1:4,6:9:11.97:332,12,0	1/1:5,7:12:15.05:494,15,0	0/0:26,0:26:72.23:0,72,1495	0/0:30,0:30:78.24:0,78,1657	0/1:18,0:18:87.81:252,0,88	0/0:41,0:41:99:0,103,2090	0/0:10,0:10:21.01:0,21,266	0/1:20,0:19:0.17:0,0,482	0/0:14,0:14:15.01:0,15,233	0/0:18,0:18:22.48:0,22,363	1/1:5,7:12:2.82:46,3,0	1/1:11,7:18:12.02:226,12,0	0/0:6,3:9:2.71:0,3,14	0/0:16,0:16:11.94:0,12,93	0/0:20,0:19:22.13:0,22,708	0/0:15,0:15:30.09:0,30,428	0/0:2,0:2:6.02:0,6,93
chr10	74853458	.	CAGAG	C	621.10	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=8.332;DP=570;FS=0.659;HRun=0;HaplotypeScore=196.3174;InbreedingCoeff=0.3886;MQ=53.86;MQ0=7;MQRankSum=-6.225;QD=5.65;ReadPosRankSum=0.039;VQSLOD=2.7620;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:3.73:0,4,24	0/0:13,0:13:33.10:0,33,723	0/0:35,0:17:5.78:0,6,316	0/0:39,0:12:11.96:0,12,308	0/0:34,0:34:93.32:0,93,2233	0/0:29,0:29:78.05:0,78,1807	0/0:30,0:30:63.18:0,63,1383	0/0:33,0:33:86.81:0,87,1663	0/1:18,0:18:10.90:18,0,11	1/1:13,3:17:6.35:387,6,0	1/1:7,4:11:3.01:51,3,0	0/0:11,0:10:4.70:0,5,41	0/1:13,0:13:28.69:29,0,32	0/0:24,0:24:63.22:0,63,1641	0/0:28,0:28:84.27:0,84,1989	1/1:10,8:20:25.42:265,25,0	0/0:39,0:39:98.93:0,99,2238	0/0:10,0:10:20.96:0,21,259	0/0:19,0:17:42.01:0,42,583	0/0:13,0:13:12.01:0,12,143	0/1:17,0:17:8.19:8,0,66	0/1:14,0:14:0.14:0,0,0	0/0:18,0:18:4.77:0,5,32	0/0:9,0:9:2.94:0,3,18	0/0:8,4:13:0.47:0,0,1	0/0:20,0:18:19.21:0,19,867	0/0:17,0:17:12.38:0,12,496	0/0:2,0:2:3.01:0,3,64
chr10	74853462	.	G	GAC	574.06	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=8.189;DP=560;FS=0.610;HRun=0;HaplotypeScore=183.9042;InbreedingCoeff=0.6355;MQ=47.65;MQ0=7;MQRankSum=-6.333;QD=3.70;ReadPosRankSum=0.388;VQSLOD=2.1843;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:0.62:5,1,0	0/0:13,0:13:36.10:0,36,509	0/0:30,0:13:10.37:0,10,241	0/0:37,0:9:19.86:0,20,239	0/0:36,0:36:96.30:0,96,1418	0/0:29,0:29:78.22:0,78,1124	0/0:26,0:26:66.16:0,66,918	0/0:35,0:35:96.25:0,96,1283	1/1:18,0:18:2.92:21,3,0	1/1:15,3:18:22.07:400,22,0	1/1:10,0:10:2.30:10,2,0	1/1:11,0:10:7.70:24,8,0	0/1:13,0:13:1.03:8,0,1	0/0:22,0:22:63.21:0,63,959	0/0:32,0:32:90.25:0,90,1290	1/1:21,0:21:31.59:226,32,0	0/0:41,0:41:99:0,108,1481	0/0:10,0:10:19.58:0,20,237	0/0:20,0:18:47.55:0,48,543	0/0:15,0:15:12.03:0,12,151	0/0:13,0:13:8.39:0,8,61	1/1:13,0:13:0.47:2,0,0	0/1:17,0:17:9.11:16,0,9	0/0:8,0:8:1.55:0,2,4	1/1:11,2:13:2.99:24,3,0	0/0:19,0:17:19.62:0,20,579	0/0:16,0:16:16.19:0,16,371	0/0:1,0:1:3.01:0,3,45
chr10	74853464	.	GAGACAC	G	970.42	PASS	AB=0.925;AC=21;AF=0.389;AN=54;BaseQRankSum=10.670;DP=550;FS=7.035;HRun=0;HaplotypeScore=212.0221;InbreedingCoeff=0.1464;MQ=46.97;MQ0=7;MQRankSum=-8.362;QD=4.37;ReadPosRankSum=-3.426;VQSLOD=1.4202;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,1:21:8.58:10,0,9	0/0:12,0:12:33.11:0,33,1122	0/0:30,0:13:29.03:0,29,482	0/0:40,0:10:20.86:0,21,416	0/0:36,0:36:96.32:0,96,2625	0/0:27,0:27:69.06:0,69,2085	0/0:24,0:24:57.18:0,57,1678	0/0:32,0:32:84.23:0,84,2153	0/1:12,7:19:28.38:300,0,28	0/1:18,0:18:28.94:141,0,29	1/1:9,0:9:3.04:47,3,0	0/1:9,2:10:59.76:93,0,60	0/1:11,4:15:66.17:211,0,66	0/0:21,0:21:63.19:0,63,2003	0/0:31,0:31:87.28:0,87,2670	1/1:19,0:19:15.20:158,15,0	0/0:39,0:40:94.52:0,95,2790	0/1:10,0:10:1.43:1,0,72	0/0:20,0:18:4.50:0,4,281	0/1:14,0:14:5.55:6,0,27	1/1:13,0:13:2.19:25,2,0	1/1:11,2:13:2.92:51,3,0	1/1:15,2:17:2.97:20,3,0	1/1:8,0:8:0.94:2,1,0	./.	0/1:20,0:18:30.50:30,0,429	0/1:15,0:15:31.68:32,0,159	0/0:1,0:1:1.82:0,2,5
chr10	74853466	.	GAC	G	763.42	PASS	AB=0.897;AC=25;AF=0.463;AN=54;BaseQRankSum=10.933;DP=539;FS=2.544;HRun=0;HaplotypeScore=181.8937;InbreedingCoeff=0.4551;MQ=46.69;MQ0=6;MQRankSum=-8.284;QD=3.50;ReadPosRankSum=-2.637;VQSLOD=2.7578;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:3.22:3,0,16	0/0:12,0:12:36.09:0,36,596	0/0:27,0:13:19.96:0,20,249	0/0:40,0:9:14.54:0,15,232	0/0:36,0:36:93.18:0,93,1458	0/0:26,0:26:66.14:0,66,1111	0/0:24,0:24:60.16:0,60,997	0/0:30,0:30:81.23:0,81,1312	1/1:19,0:19:19.04:105,19,0	1/1:14,0:17:19.06:222,19,0	1/1:9,0:9:3.01:34,3,0	1/1:11,0:10:10.50:42,11,0	1/1:15,0:15:17.84:101,18,0	0/0:21,0:21:60.19:0,60,1062	0/0:31,0:31:84.21:0,84,1358	1/1:14,2:18:19.82:200,20,0	0/0:38,0:38:93.12:0,93,1458	0/1:7,3:10:29.26:64,0,29	0/0:19,1:18:2.56:0,3,163	0/1:13,1:14:20.75:23,0,21	1/1:9,2:12:1.91:5,2,0	1/1:13,0:13:3.40:18,3,0	1/1:17,0:17:2.80:19,3,0	1/1:8,0:8:0.94:3,1,0	./.	0/1:18,0:17:59.59:60,0,214	0/1:12,2:15:43.67:44,0,144	0/0:1,0:1:2.94:0,3,18
chr10	74853476	.	GAC	G	298.51	PASS	AB=0.777;AC=15;AF=0.278;AN=54;BaseQRankSum=7.694;DP=557;FS=7.841;HRun=0;HaplotypeScore=205.0614;InbreedingCoeff=0.2965;MQ=41.94;MQ0=9;MQRankSum=-7.541;QD=1.98;ReadPosRankSum=0.996;VQSLOD=1.9289;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,5:18:5.59:6,0,32	0/0:15,0:15:45.10:0,45,764	0/0:25,0:7:20.90:0,21,355	0/0:42,0:9:11.91:0,12,202	0/0:36,0:36:99:0,101,1543	0/0:26,0:26:72.03:0,72,1166	0/0:26,0:26:68.80:0,69,1107	0/0:31,0:31:87.22:0,87,1400	0/1:15,7:22:37.91:38,0,51	0/1:15,0:15:38.70:39,0,39	1/1:6,0:7:0.11:3,0,0	0/1:6,6:11:6.42:119,0,6	0/1:10,7:17:79.25:119,0,79	0/0:21,0:21:63.19:0,63,1118	0/0:33,0:33:93.24:0,93,1599	1/1:20,0:20:3.97:65,4,0	0/0:33,0:33:83.84:0,84,1483	0/0:9,0:9:7.24:0,7,48	0/0:14,0:13:29.83:0,30,267	0/0:16,0:16:4.75:0,5,41	1/1:12,0:12:1.91:5,2,0	0/0:9,7:16:1.07:0,1,4	1/1:10,7:16:2.99:33,3,0	1/1:6,3:11:3.42:11,3,0	./.	0/0:25,0:23:56.51:0,57,558	0/0:22,0:22:45.89:0,46,410	0/0:3,0:3:5.88:0,6,35
chr10	74853486	.	GAC	G	721.64	PASS	AB=0.965;AC=24;AF=0.429;AN=56;BaseQRankSum=9.525;DP=569;FS=8.536;HRun=0;HaplotypeScore=215.7629;InbreedingCoeff=0.4172;MQ=42.72;MQ0=12;MQRankSum=-7.653;QD=3.11;ReadPosRankSum=-1.265;VQSLOD=1.5089;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:3.70:4,0,9	0/0:16,0:16:48.15:0,48,891	0/0:26,0:11:26.91:0,27,400	0/0:51,0:16:9:0,9,216	0/0:34,0:34:82.16:0,82,1467	0/0:23,0:23:59.92:0,60,999	0/0:27,0:27:65.59:0,66,1119	0/0:35,0:35:90.98:0,91,1299	0/1:22,1:23:18.22:18,0,26	1/1:12,3:16:30.58:292,31,0	1/1:2,3:5:3.01:38,3,0	1/1:12,0:12:6.59:35,7,0	1/1:18,0:18:3.61:76,4,0	0/0:20,0:20:57.11:0,57,948	0/0:35,0:35:99:0,99,1755	1/1:11,7:18:26.29:304,26,0	0/0:32,1:33:87.24:0,87,1535	0/0:8,0:8:16.84:0,17,137	0/0:13,0:12:4.72:0,5,253	1/1:17,0:17:2.59:18,3,0	1/1:10,0:12:1.91:5,2,0	0/0:15,0:15:0.72:0,1,1	1/1:16,0:15:2.57:10,3,0	1/1:10,0:11:2.04:7,2,0	0/1:8,2:10:0:0,0,0	0/1:28,0:26:41.09:41,0,434	0/1:22,0:22:28.24:28,0,356	0/1:5,0:4:13.95:14,0,39
chr10	74853488	.	CAGAGAGAG	C	492.91	PASS	AB=0.976;AC=15;AF=0.268;AN=56;BaseQRankSum=9.624;DP=569;FS=0.610;HRun=0;HaplotypeScore=259.2102;InbreedingCoeff=0.3252;MQ=47.49;MQ0=14;MQRankSum=-7.263;QD=3.18;ReadPosRankSum=-3.707;VQSLOD=1.5265;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:19.62:20,0,42	0/0:16,0:16:48.16:0,48,1706	0/0:29,0:12:20.63:0,21,524	0/0:59,0:19:18.45:0,18,415	0/0:32,0:32:84.27:0,84,2577	0/0:22,0:22:60.19:0,60,2153	0/0:28,0:28:71.90:0,72,2110	0/0:35,0:35:99:0,105,2022	0/0:22,0:22:25.76:0,26,253	0/1:13,1:14:34.31:293,0,34	1/1:7,0:7:4.15:37,4,0	0/0:11,0:11:16.75:0,17,123	0/0:18,0:18:35.26:0,35,284	0/0:20,0:20:60.16:0,60,2121	0/0:35,0:35:99:0,99,3382	1/1:17,2:19:19.71:178,20,0	0/0:33,0:33:87.30:0,87,3188	0/0:7,0:7:17.32:0,17,201	0/1:13,0:12:39.91:40,0,94	1/1:16,0:16:3.49:32,3,0	1/1:11,0:11:2.32:28,2,0	0/1:15,0:15:0.69:1,0,19	0/0:16,0:15:0.79:0,1,8	0/0:11,0:11:1.79:0,2,6	0/1:8,1:9:0:0,0,0	0/1:28,0:26:10.59:11,0,280	0/0:20,0:20:17.87:0,18,197	0/1:5,0:4:2.07:2,0,29
chr10	74853496	.	GAC	G	857.76	PASS	AB=0.975;AC=25;AF=0.446;AN=56;BaseQRankSum=9.424;DP=571;FS=9.790;HRun=0;HaplotypeScore=223.5564;InbreedingCoeff=0.5140;MQ=47.52;MQ0=16;MQRankSum=-8.218;QD=4.47;ReadPosRankSum=2.294;VQSLOD=1.5894;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,6:19:12.81:82,13,0	0/0:16,0:16:48.14:0,48,784	0/0:33,0:12:22.97:0,23,311	0/0:56,1:21:2.62:0,3,187	0/0:30,0:30:81.18:0,81,1284	0/0:22,0:22:59.05:0,59,785	0/0:29,0:29:71.56:0,72,1060	0/0:39,0:39:99:0,102,1399	1/1:8,14:22:23.73:228,24,0	0/1:10,0:14:59.85:77,0,60	1/1:6,0:6:3.01:37,3,0	1/1:6,5:11:14.31:125,14,0	1/1:8,10:18:26.14:275,26,0	0/0:20,0:20:56.84:0,57,714	0/0:34,0:34:96.17:0,96,1427	1/1:16,0:20:16.88:117,17,0	0/0:32,0:32:84.05:0,84,1232	0/1:6,1:7:16.45:16,0,157	0/0:16,0:14:12.82:0,13,188	0/1:17,0:17:11.44:12,0,11	1/1:8,1:9:1.91:5,2,0	1/1:8,6:14:3.64:33,4,0	1/1:5,5:9:2.88:16,3,0	1/1:7,3:10:1.26:5,1,0	0/1:9,0:10:0:0,0,0	0/0:28,0:28:8.28:0,8,254	0/0:21,0:21:5.76:0,6,122	0/1:5,0:4:9.41:9,0,18
chr10	74853502	.	C	CAG	1093.41	PASS	AB=0.996;AC=22;AF=0.393;AN=56;BaseQRankSum=8.964;DP=568;FS=11.139;HRun=0;HaplotypeScore=218.3994;InbreedingCoeff=0.5752;MQ=48.95;MQ0=14;MQRankSum=-9.164;QD=4.77;ReadPosRankSum=0.270;VQSLOD=1.9607;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:0.78:1,0,20	0/0:16,0:16:39.12:0,39,469	0/0:37,0:11:12.14:0,12,113	0/1:65,0:23:4.29:4,0,111	0/0:29,0:29:75.22:0,75,909	0/0:24,0:24:45.11:0,45,526	0/0:28,0:28:59.55:0,60,720	0/0:40,0:40:59.47:0,59,919	0/0:22,0:22:20.77:0,21,146	0/1:13,0:13:12.52:128,0,13	1/1:6,0:6:1.52:4,2,0	0/0:12,0:12:8.85:0,9,60	0/0:19,0:19:26.56:0,27,172	0/0:19,0:19:33.10:0,33,402	0/0:34,0:35:69.17:0,69,811	1/1:19,0:19:0.66:107,1,0	0/0:31,0:31:57.15:0,57,677	0/0:7,0:7:9.92:0,10,140	1/1:12,2:12:26.90:256,27,0	1/1:17,1:18:2.63:12,3,0	0/0:7,2:9:2.40:0,2,11	0/0:11,0:11:4.78:0,5,23	1/1:8,0:7:2.16:6,2,0	1/1:9,0:9:1.51:5,2,0	0/1:8,0:8:0:0,0,0	1/1:25,0:25:23.41:415,23,0	1/1:20,0:20:17.38:250,17,0	1/1:5,0:4:8.98:73,9,0
chr10	74853516	.	GAC	G	1182.43	PASS	AB=0.847;AC=20;AF=0.357;AN=56;BaseQRankSum=11.113;DP=555;FS=14.104;HRun=0;HaplotypeScore=208.9955;InbreedingCoeff=0.3451;MQ=56.31;MQ0=15;MQRankSum=-10.281;QD=6.83;ReadPosRankSum=2.813;VQSLOD=2.3775;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,1:14:8.97:78,9,0	0/0:15,0:15:42.12:0,42,720	0/0:50,0:22:11.99:0,12,249	0/0:80,0:34:0.58:0,1,246	0/0:29,0:29:87.24:0,87,1555	0/0:22,0:22:60.11:0,60,987	0/0:28,0:28:68.59:0,69,1182	0/0:44,0:44:99:0,129,1947	0/1:18,0:18:0.91:1,0,12	0/1:13,0:13:11.49:129,0,11	1/1:7,0:7:0.88:3,1,0	0/0:9,0:9:5.89:0,6,22	0/0:14,0:14:5.38:0,5,44	0/0:13,0:13:36.10:0,36,637	0/0:29,0:29:78.14:0,78,1283	1/1:17,0:17:2.98:101,3,0	0/0:25,0:25:66.15:0,66,1125	0/1:6,1:7:19.54:20,0,32	0/1:7,7:12:0.21:187,0,0	0/0:5,10:15:2.26:0,2,15	1/1:6,2:8:2.44:7,2,0	0/0:8,0:8:0.72:0,1,2	0/1:6,0:6:0.02:0,0,0	1/1:11,0:11:7.85:38,8,0	0/1:8,0:8:0:0,0,0	0/1:12,14:26:7.08:425,0,7	0/1:6,14:20:20.05:262,0,20	1/1:1,3:3:9.01:84,9,0
chr10	74853521	.	AGG	A	1722.70	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=12.849;DP=541;FS=9.127;HRun=3;HaplotypeScore=201.6684;InbreedingCoeff=0.6687;MQ=61.82;MQ0=12;MQRankSum=-10.438;QD=7.73;ReadPosRankSum=2.940;VQSLOD=-0.2933;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,2:12:8.75:82,9,0	0/0:14,0:14:39.13:0,39,710	0/1:55,0:26:3.88:4,0,429	0/0:82,2:39:4.70:0,5,375	0/0:29,0:29:87.26:0,87,1572	0/0:23,0:23:57.13:0,57,1020	0/0:28,0:28:72.68:0,73,1260	0/0:46,0:46:99:0,138,2547	0/1:18,0:18:2.97:3,0,12	1/1:11,0:11:28.85:212,29,0	1/1:6,0:6:1.82:5,2,0	0/0:9,0:9:4.67:0,5,19	0/0:14,0:14:5.94:0,6,38	0/0:13,0:13:36.09:0,36,598	0/0:28,0:28:81.21:0,81,1453	1/1:16,0:16:23.14:170,23,0	0/0:22,0:22:66.12:0,66,1132	1/1:4,3:7:15.01:152,15,0	1/1:12,1:11:24.52:247,25,0	1/1:11,1:12:3.45:21,3,0	1/1:5,2:7:2.44:7,2,0	0/0:8,0:8:0.27:0,0,1	1/1:6,0:6:2.20:7,2,0	1/1:10,1:11:2.77:11,3,0	0/1:6,0:6:0:0,0,0	1/1:19,3:22:59.38:545,59,0	1/1:15,3:18:41.64:356,42,0	1/1:3,0:3:9.01:86,9,0
chr10	74853522	.	GGGAGAGACAC	G	3722.93	PASS	AB=0.917;AC=30;AF=0.536;AN=56;BaseQRankSum=13.044;DP=536;FS=10.863;HRun=0;HaplotypeScore=248.0186;InbreedingCoeff=0.5321;MQ=62.92;MQ0=11;MQRankSum=-11.559;QD=19.09;ReadPosRankSum=-0.077;VQSLOD=1.2051;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:4.28:161,0,4	0/0:13,0:13:39.13:0,39,1741	0/0:55,0:26:13.51:0,14,1143	0/0:84,0:41:15.07:0,15,912	0/0:29,0:29:87.27:0,87,3811	0/0:21,0:21:57.17:0,57,2620	0/0:28,0:28:76.53:0,77,3287	0/0:47,0:47:99:0,141,5693	0/1:18,0:18:12.86:13,0,44	1/1:1,10:11:33.11:1017,33,0	1/1:2,4:6:4.15:48,4,0	0/1:9,0:9:13.23:13,0,23	0/1:14,0:14:25.54:26,0,45	0/0:13,0:13:36.10:0,36,1523	0/0:28,0:28:81.01:0,81,3753	1/1:2,14:16:28.74:623,29,0	0/0:22,0:22:66.19:0,66,2760	1/1:7,0:7:15.02:259,15,0	1/1:13,0:11:19.17:267,19,0	0/1:12,0:12:7.72:26,0,8	1/1:5,0:5:1.61:4,2,0	1/1:8,0:8:2.34:6,2,0	1/1:5,0:5:1.29:3,1,0	1/1:11,0:11:5.46:46,5,0	0/1:0,5:5:0:0,0,0	1/1:21,1:22:16.25:678,16,0	1/1:18,0:18:34.04:430,34,0	1/1:3,0:3:9.02:104,9,0
chr10	74853526	.	GAGACAC	G	3853.45	PASS	AB=0.967;AC=27;AF=0.482;AN=56;BaseQRankSum=11.956;DP=561;FS=9.886;HRun=0;HaplotypeScore=232.7095;InbreedingCoeff=0.6686;MQ=65.54;MQ0=10;MQRankSum=-10.746;QD=15.05;ReadPosRankSum=0.316;VQSLOD=1.7909;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:33.74:34,0,59	0/0:12,0:12:32.69:0,33,994	0/0:58,0:29:46.36:0,46,1348	0/1:88,0:46:45.88:46,0,695	0/0:28,0:28:84.14:0,84,2203	0/0:22,0:22:59.92:0,60,1861	0/0:28,0:28:72.05:0,72,2235	0/0:51,0:51:99:0,150,3909	0/0:19,0:19:14.35:0,14,284	1/1:12,0:12:33.95:476,34,0	0/1:6,0:6:0.06:0,0,1	0/0:10,0:10:17.21:0,17,212	0/0:14,0:14:30.02:0,30,568	0/0:14,0:14:39.12:0,39,1184	0/0:27,0:27:77.89:0,78,2563	1/1:17,0:17:23.44:320,23,0	0/0:20,0:20:60.12:0,60,1683	1/1:4,3:7:12.04:209,12,0	1/1:13,0:11:31.50:525,32,0	1/1:12,1:13:5.15:24,5,0	0/1:5,1:6:0.14:0,0,0	0/1:8,0:8:0.58:1,0,27	1/1:7,0:7:4.27:13,4,0	1/1:12,0:12:2.45:15,2,0	1/1:6,0:6:2.92:17,3,0	1/1:21,2:23:55.61:1129,56,0	1/1:15,3:18:42.87:820,43,0	1/1:5,0:5:11.99:225,12,0
chr10	74853528	.	GACAC	G	2666.60	PASS	AB=0.974;AC=25;AF=0.446;AN=56;BaseQRankSum=11.384;DP=558;FS=12.507;HRun=0;HaplotypeScore=220.7395;InbreedingCoeff=0.6604;MQ=64.06;MQ0=10;MQRankSum=-10.329;QD=11.64;ReadPosRankSum=2.399;VQSLOD=2.0338;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:12:14.98:15,0,40	0/0:12,0:12:36.12:0,36,913	0/0:57,0:28:48.27:0,48,1171	0/1:89,0:44:99:101,0,708	0/0:28,0:28:84.27:0,84,2122	0/0:21,0:21:60.19:0,60,1577	0/0:28,0:28:72.12:0,72,1940	0/0:52,0:52:99:0,157,3909	0/0:19,0:19:15.24:0,15,271	1/1:12,0:12:34.78:380,35,0	0/1:4,0:4:0:0,0,0	0/0:11,0:11:17.98:0,18,200	0/0:16,0:16:30.02:0,30,458	0/0:13,0:13:39.13:0,39,1038	0/0:30,0:30:87.08:0,87,2276	1/1:17,0:17:23.70:277,24,0	0/0:20,0:20:60.21:0,60,1570	1/1:6,0:6:11.63:140,12,0	1/1:5,7:11:19.97:356,20,0	0/0:3,10:13:1.97:0,2,8	1/1:5,1:6:0.42:1,0,0	0/0:8,0:8:0.74:0,1,31	1/1:7,0:7:2.75:13,3,0	1/1:11,0:12:2.59:15,3,0	1/1:6,0:6:3:37,3,0	1/1:7,14:23:37.24:807,37,0	1/1:4,14:18:35.40:558,35,0	1/1:2,3:5:11.99:155,12,0
chr10	74853532	.	C	CAG	1527.34	PASS	AB=0.860;AC=19;AF=0.339;AN=56;BaseQRankSum=8.788;DP=573;FS=9.082;HRun=0;HaplotypeScore=224.6979;InbreedingCoeff=0.5879;MQ=67.65;MQ0=8;MQRankSum=-7.850;QD=6.88;ReadPosRankSum=-1.475;VQSLOD=2.0305;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:4,7:11:5.94:44,0,6	0/0:12,0:12:33.05:0,33,412	0/0:61,0:30:39.67:0,40,692	0/1:90,0:48:3.81:4,0,357	0/0:28,0:28:72.23:0,72,967	0/0:21,0:21:60.18:0,60,791	0/0:27,0:27:65.57:0,66,903	0/0:49,0:48:99:0,129,1689	1/1:1,18:19:20.16:300,20,0	1/1:17,0:17:33.21:324,33,0	0/0:5,0:5:0:0,0,0	1/1:2,10:12:18.06:298,18,0	1/1:3,14:17:30.10:455,30,0	0/0:13,0:13:39.12:0,39,515	0/0:32,0:32:87.23:0,87,1141	1/1:19,0:19:27.97:206,28,0	0/0:21,0:21:54.13:0,54,701	0/1:6,0:6:4.20:9,0,4	0/0:12,0:12:11.53:0,12,66	0/0:15,0:15:2.57:0,3,16	0/1:5,0:5:0.02:0,0,0	1/1:1,7:8:1.33:40,1,0	0/0:3,4:7:1.32:0,1,3	0/1:6,5:11:0.70:3,0,1	1/1:6,0:6:2.93:19,3,0	0/0:25,0:25:7.27:0,7,162	0/0:18,0:18:2.90:0,3,114	0/0:5,0:5:7.45:0,7,31
chr10	74853567	.	C	CAGAG	3219.84	PASS	AB=0.994;AC=30;AF=0.536;AN=56;BaseQRankSum=9.624;DP=635;FS=7.467;HRun=0;HaplotypeScore=237.8256;InbreedingCoeff=0.3398;MQ=74.37;MQ0=13;MQRankSum=-8.594;QD=11.06;ReadPosRankSum=2.394;VQSLOD=1.6674;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,5:13:10.22:159,10,0	0/0:9,0:9:22.87:0,23,347	0/0:75,0:35:56.11:0,56,802	0/0:113,0:56:3.18:0,3,440	0/0:22,0:22:54.08:0,54,877	0/0:25,0:25:66.23:0,66,1182	0/0:22,0:22:54.17:0,54,941	0/0:35,0:35:87.26:0,87,1439	1/1:12,3:15:16.09:313,16,0	0/1:22,0:22:99:225,0,112	1/1:10,0:10:12.12:83,12,0	1/1:9,6:15:25.28:480,25,0	1/1:9,8:17:7.89:622,8,0	0/1:20,1:21:19.57:20,0,867	0/0:30,0:30:78.09:0,78,1280	0/1:18,0:18:7.59:216,0,8	0/0:13,0:13:33.11:0,33,580	0/1:9,0:9:18.02:65,0,18	0/1:19,0:18:99:169,0,105	1/1:17,0:17:17.65:142,18,0	1/1:16,0:16:14.06:79,14,0	1/1:10,1:11:4.94:65,5,0	1/1:6,4:9:8.91:193,9,0	1/1:6,2:8:2.99:65,3,0	1/1:16,0:16:22.05:125,22,0	0/1:30,0:30:99:212,0,233	0/1:20,0:20:84.79:149,0,85	0/1:4,0:4:35.12:35,0,69
chr10	74853571	.	GAT	G	160.93	PASS	AB=0.973;AC=10;AF=0.179;AN=56;BaseQRankSum=5.364;DP=641;FS=0.580;HRun=0;HaplotypeScore=229.7980;InbreedingCoeff=0.1012;MQ=71.23;MQ0=14;MQRankSum=-4.282;QD=1.22;ReadPosRankSum=-4.651;VQSLOD=1.4565;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,1:14:8.29:0,8,34	0/0:10,0:10:25.13:0,25,374	0/0:70,0:32:28.03:0,28,561	0/0:114,0:54:21.34:0,21,444	0/0:21,0:21:54.06:0,54,895	0/0:24,0:24:66.20:0,66,1203	0/0:19,1:20:57.15:0,57,978	0/0:30,0:30:87.22:0,87,1391	0/1:17,0:17:4.62:5,0,17	0/1:26,0:26:39.32:39,0,599	0/0:12,0:12:6.84:0,7,142	0/1:14,1:15:26.78:60,0,27	0/1:22,0:22:47.68:51,0,48	0/0:20,0:20:59.93:0,60,1052	0/0:27,0:27:81.16:0,81,1317	0/0:17,0:17:23.49:0,23,257	0/0:12,0:12:33.05:0,33,532	0/0:11,0:11:2.43:0,2,181	0/1:21,0:20:41.04:41,0,312	0/0:15,0:15:19.06:0,19,170	0/0:16,0:16:17.22:0,17,202	1/1:11,1:12:0.62:46,1,0	0/1:8,1:8:16.69:20,0,17	1/1:10,0:10:5.56:35,6,0	0/0:19,0:19:30.47:0,30,343	0/0:27,0:27:44.60:0,45,752	0/0:22,0:22:2.52:0,3,309	0/0:4,0:4:11.96:0,12,121
chr10	74853573	.	TAG	T	110.89	PASS	AB=0.960;AC=12;AF=0.214;AN=56;BaseQRankSum=6.688;DP=638;FS=5.353;HRun=0;HaplotypeScore=223.2188;InbreedingCoeff=-0.1489;MQ=70.61;MQ0=15;MQRankSum=-4.090;QD=0.50;ReadPosRankSum=-2.042;VQSLOD=2.1166;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:8.32:0,8,45	0/0:10,0:10:18.06:0,18,280	0/1:71,1:29:15.88:16,0,291	0/0:114,0:53:41.25:0,41,516	0/0:20,0:20:42.14:0,42,698	0/0:25,0:25:63.20:0,63,1028	0/0:20,0:20:48.16:0,48,803	0/0:29,0:29:66.15:0,66,1035	0/0:16,0:16:6.27:0,6,60	0/0:27,0:27:35.47:0,35,338	0/1:9,2:11:10.54:11,0,62	0/1:15,0:15:10.67:11,0,96	0/0:20,0:20:20.94:0,21,164	0/0:19,0:19:57.18:0,57,916	0/0:28,0:28:66.21:0,66,1075	0/1:16,1:17:9.57:10,0,122	0/0:13,0:13:24.08:0,24,398	0/1:10,1:12:19.45:19,0,101	0/1:19,0:18:95.70:96,0,158	0/0:15,1:16:4.36:0,4,77	0/0:20,0:20:1.81:0,2,81	0/1:9,0:9:5.56:6,0,22	0/1:8,0:7:8.80:9,0,29	1/1:11,0:11:2.49:10,2,0	0/0:20,2:22:18.63:0,19,192	0/1:27,0:27:25.95:26,0,305	0/1:17,2:19:38.04:38,0,136	0/0:4,0:4:5.99:0,6,48
chr10	74853575	.	G	GAT	917.78	PASS	AB=0.985;AC=20;AF=0.357;AN=56;BaseQRankSum=10.777;DP=650;FS=8.059;HRun=0;HaplotypeScore=225.9800;InbreedingCoeff=0.4626;MQ=68.62;MQ0=17;MQRankSum=-10.026;QD=4.52;ReadPosRankSum=5.236;VQSLOD=1.6145;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:10.02:87,10,0	0/0:8,0:8:21.06:0,21,295	0/0:74,0:31:52.99:0,53,585	0/0:118,0:52:36.34:0,36,492	0/0:17,0:17:45.14:0,45,665	0/0:25,0:25:69.18:0,69,988	0/0:20,0:20:57.13:0,57,805	0/0:30,0:30:84.15:0,84,1115	1/1:13,0:14:14.12:151,14,0	0/0:27,0:27:8.18:0,8,129	1/1:11,0:11:0.66:5,1,0	1/1:12,3:15:4.23:232,4,0	0/1:18,2:20:5.03:297,0,5	0/0:19,0:19:22.49:0,22,785	0/0:30,0:30:65.72:0,66,1067	0/1:17,0:17:1.78:22,0,2	0/0:13,0:13:25.25:0,25,426	0/0:14,0:14:4.58:0,5,46	0/1:23,0:22:20.15:20,0,88	1/1:17,0:17:5.93:17,6,0	0/1:20,0:20:0.72:3,0,1	1/1:8,1:9:3.67:55,4,0	1/1:8,0:7:11.77:149,12,0	0/1:12,0:12:17.08:47,0,17	0/1:23,0:23:1.35:1,0,23	0/0:27,0:27:18.47:0,18,163	0/0:19,0:19:2.10:0,2,82	0/0:4,0:4:1.64:0,2,33
chr10	74853581	.	G	GAGAT	10443.95	PASS	AB=0.769;AC=34;AF=0.607;AN=56;BaseQRankSum=3.886;DP=670;FS=4.166;HRun=0;HaplotypeScore=203.1498;InbreedingCoeff=0.6661;MQ=67.74;MQ0=16;MQRankSum=-8.007;QD=31.74;ReadPosRankSum=3.841;VQSLOD=4.8494;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,4:18:13.19:182,13,0	0/0:8,0:8:21.06:0,21,347	0/0:75,0:30:17.63:0,18,402	0/0:119,0:49:54.89:0,55,543	0/0:21,0:21:57.11:0,57,907	0/0:24,0:25:63.20:0,63,1162	0/0:22,0:22:54.16:0,54,961	0/0:28,0:28:78.16:0,78,1265	1/1:10,4:15:10.38:298,10,0	1/1:12,16:29:62.34:1469,62,0	1/1:4,6:10:15.05:404,15,0	1/1:11,6:17:11.10:523,11,0	1/1:12,8:20:7.38:716,7,0	0/1:19,1:20:18.28:18,0,968	0/0:29,0:29:75.20:0,75,1286	1/1:7,10:17:30.09:751,30,0	0/0:11,0:11:23.86:0,24,447	1/1:5,9:14:3.19:426,3,0	0/1:11,15:27:56.57:980,0,57	0/1:5,12:18:3.89:461,0,4	1/1:2,20:24:17.95:485,18,0	0/1:10,1:11:1.20:190,0,1	1/1:3,5:7:11.07:201,11,0	1/1:8,2:10:6.08:115,6,0	1/1:12,12:24:32.86:777,33,0	1/1:8,16:26:47.68:1473,48,0	1/1:3,12:17:33.11:813,33,0	1/1:2,2:4:6.02:161,6,0
chr10	74853643	.	CAGAG	C	2718.90	PASS	AB=0.947;AC=9;AF=0.161;AN=56;BaseQRankSum=7.613;DP=655;FS=3.079;HRun=0;HaplotypeScore=141.2805;InbreedingCoeff=0.8690;MQ=57.07;MQ0=15;MQRankSum=0.247;QD=26.92;ReadPosRankSum=0.144;VQSLOD=3.5558;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:36.12:0,36,902	0/0:7,0:7:18.06:0,18,456	0/0:45,0:18:17.71:0,18,370	0/0:78,0:21:16.33:0,16,213	0/0:32,0:32:84.27:0,84,2004	0/0:16,0:16:42.13:0,42,967	0/0:25,0:25:66.18:0,66,1487	0/0:45,0:45:99:0,120,2768	0/0:22,0:22:42.06:0,42,985	1/1:5,26:31:63.16:1304,63,0	1/1:1,13:14:21:369,21,0	0/0:18,0:18:39.09:0,39,963	0/0:30,0:30:80.78:0,81,1854	0/0:14,0:14:42.13:0,42,925	0/0:20,0:20:60.18:0,60,1437	1/1:2,15:17:36.12:643,36,0	0/0:11,0:11:30.09:0,30,698	0/0:12,0:12:21.07:0,21,505	0/0:26,0:25:66.06:0,66,1376	0/0:15,0:15:30.10:0,30,689	0/0:36,0:36:56.94:0,57,1359	0/0:15,0:15:22.51:0,23,922	0/0:15,0:15:33.11:0,33,854	0/0:14,0:14:27.56:0,28,699	1/1:5,16:21:33.10:557,33,0	0/1:17,1:18:8.45:8,0,969	0/0:27,0:27:66.16:0,66,1590	0/0:5,0:5:15.03:0,15,333
chr10	74854956	.	C	CA	4927.83	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-13.215;DP=510;FS=7.530;HRun=8;HaplotypeScore=56.2746;InbreedingCoeff=0.9743;MQ=68.54;MQ0=0;MQRankSum=1.232;QD=25.80;ReadPosRankSum=1.464;VQSLOD=5.6064;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,926	0/0:8,0:8:24.01:0,24,220	0/0:19,0:11:11.37:0,11,139	0/0:19,0:16:8.18:0,8,142	0/0:25,0:25:54:0,54,489	0/0:23,0:23:66.02:0,66,600	0/0:18,0:18:51.01:0,51,462	0/0:28,0:28:69.03:0,69,629	0/0:12,0:12:30:0,30,275	1/1:3,24:27:72.15:804,72,0	1/1:4,17:21:51.15:586,51,0	0/0:12,0:12:30.01:0,30,275	0/0:16,0:16:29.67:0,30,253	0/0:16,0:16:42.01:0,42,381	0/0:16,0:16:48.03:0,48,439	1/1:1,15:16:39.12:450,39,0	0/0:19,0:19:51.03:0,51,467	1/1:3,14:17:33.10:379,33,0	1/1:2,13:15:36.09:404,36,0	1/1:2,17:19:51.15:589,51,0	1/1:4,9:13:21.06:242,21,0	0/0:13,0:13:36.02:0,36,329	0/0:22,0:22:60.01:0,60,545	0/0:15,0:15:42.02:0,42,383	1/1:0,19:19:36.11:415,36,0	1/1:3,23:26:69.15:762,69,0	1/1:5,10:15:18.05:208,18,0	1/1:1,2:3:8.97:88,9,0
chr10	74855554	.	G	GA	17770.08	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-13.281;DP=742;FS=4.671;HRun=3;HaplotypeScore=69.0671;InbreedingCoeff=0.9996;MQ=84.58;MQ0=1;MQRankSum=-3.713;QD=37.81;ReadPosRankSum=3.269;VQSLOD=5.3775;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,49:52:99:1974,141,0	0/0:17,0:17:48.15:0,48,576	0/0:30,0:30:69.20:0,69,818	0/0:26,0:25:54.34:0,54,735	0/0:29,0:29:81.25:0,81,972	0/0:21,0:21:63.19:0,63,756	0/0:18,0:18:51.16:0,51,612	0/0:27,0:27:78.21:0,78,908	1/1:1,24:25:69.23:966,69,0	1/1:5,33:38:99:1346,99,0	1/1:1,9:10:30.04:380,30,0	1/1:4,26:30:75.25:1050,75,0	1/1:0,20:20:54.18:756,54,0	0/0:32,0:32:90.28:0,90,1079	0/0:32,0:32:93.28:0,93,1116	1/1:2,29:31:78.26:1092,78,0	0/0:40,0:39:99:0,117,1389	1/1:3,26:29:75.25:1050,75,0	1/1:3,20:23:66.22:915,66,0	1/1:1,23:24:69.14:922,69,0	1/1:1,29:30:78.26:1092,78,0	1/1:0,17:17:48.16:672,48,0	1/1:1,21:22:63.21:882,63,0	1/1:0,34:34:96.32:1344,96,0	1/1:0,16:16:45.15:630,45,0	1/1:1,26:27:78.23:1058,78,0	1/1:1,32:34:93.31:1301,93,0	1/1:0,8:8:24.08:336,24,0
chr10	74856097	.	A	AT	1948.20	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=5.043;DP=460;FS=1.853;HRun=2;HaplotypeScore=61.5882;InbreedingCoeff=0.2298;MQ=69.53;MQ0=3;MQRankSum=1.282;QD=7.41;ReadPosRankSum=7.089;VQSLOD=0.8657;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,35:37:75.20:1047,75,0	0/0:14,0:14:42.03:0,42,438	0/0:41,0:17:19.24:0,19,208	0/0:25,0:11:8.62:0,9,101	0/0:20,0:20:57.07:0,57,603	0/0:12,0:12:36.10:0,36,430	0/0:19,0:19:48.06:0,48,500	0/0:21,0:21:60.07:0,60,628	1/1:1,6:7:12.04:171,12,0	0/1:15,0:15:8.89:9,0,121	0/1:11,0:11:6.19:6,0,71	1/1:2,12:14:24.08:342,24,0	1/1:0,4:4:3.01:43,3,0	0/0:10,0:10:27.03:0,27,284	0/0:12,0:12:26.40:0,26,328	0/1:11,0:11:16.76:17,0,25	0/0:20,0:20:56.99:0,57,608	0/1:25,0:25:50.98:57,0,51	0/1:25,0:25:16.33:16,0,156	0/1:13,0:13:29.40:29,0,43	0/1:9,0:9:6.20:6,0,37	1/1:0,3:3:6.01:62,6,0	1/1:0,8:8:9:128,9,0	1/1:1,6:7:6.02:85,6,0	0/1:20,0:20:27.13:27,0,69	0/1:28,0:28:44.95:52,0,45	0/1:21,0:21:14.34:14,0,103	1/1:4,0:4:7.36:23,7,0
chr10	74856099	.	T	TA	4216.70	PASS	AB=0.958;AC=36;AF=0.643;AN=56;BaseQRankSum=-4.849;DP=464;FS=5.525;HRun=11;HaplotypeScore=55.7684;InbreedingCoeff=0.7452;MQ=68.20;MQ0=3;MQRankSum=0.380;QD=15.06;ReadPosRankSum=4.508;VQSLOD=5.3890;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:54.10:458,54,0	0/0:14,0:14:41.84:0,42,324	0/0:42,1:16:25.88:0,26,184	0/0:26,0:10:14.49:0,14,95	0/0:20,0:20:44.70:0,45,342	0/0:12,0:12:35.86:0,36,277	0/0:16,0:16:32.86:0,33,255	0/0:22,0:22:44.76:0,45,344	1/1:6,0:6:11.65:65,12,0	1/1:5,8:13:3.82:220,4,0	1/1:4,7:11:18.03:177,18,0	1/1:12,0:12:3.22:116,3,0	1/1:4,0:4:2.88:15,3,0	0/0:10,0:10:23.89:0,24,184	0/1:10,1:11:3.55:4,0,159	1/1:2,9:11:21.04:213,21,0	0/0:20,0:20:41.80:0,42,325	1/1:6,19:25:30.91:481,31,0	1/1:7,17:26:30.74:471,31,0	1/1:5,12:17:27.01:263,27,0	1/1:3,8:12:17.79:153,18,0	1/1:4,0:4:0.22:17,0,0	1/1:8,0:8:8.75:50,9,0	0/1:7,0:7:12.80:26,0,13	1/1:4,17:21:36.07:365,36,0	1/1:2,27:29:74.88:711,75,0	1/1:7,15:22:24.47:291,24,0	1/1:2,4:6:12.02:122,12,0
chr10	74856201	.	AAAAAAAAAAG	A	2003.75	PASS	AB=0.882;AC=13;AF=0.232;AN=56;BaseQRankSum=2.063;DP=402;FS=1.213;HRun=0;HaplotypeScore=114.3395;InbreedingCoeff=0.5621;MQ=46.31;MQ0=15;MQRankSum=-1.572;QD=20.24;ReadPosRankSum=1.090;VQSLOD=2.3813;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,3:25:87.11:593,0,87	0/0:11,0:11:30.05:0,30,847	0/0:4,0:1:3.01:0,3,87	0/0:8,0:1:2.97:0,3,20	0/0:32,0:32:84.01:0,84,2152	0/0:15,0:14:42.05:0,42,877	0/1:10,0:8:41.18:41,0,450	0/0:25,0:23:59.58:0,60,1138	1/1:2,9:10:9.03:209,9,0	0/0:8,0:8:20.99:0,21,428	0/0:10,0:9:16.27:0,16,347	1/1:9,4:13:32.09:607,32,0	0/1:6,3:7:25.39:241,0,25	0/0:10,0:10:27.08:0,27,732	0/0:14,0:14:39.09:0,39,809	0/0:13,0:11:30.10:0,30,698	0/0:25,0:21:50.16:0,50,1306	0/0:17,0:14:14.54:0,15,1037	0/0:24,0:21:54.06:0,54,1218	0/0:18,0:16:37.27:0,37,690	0/0:4,0:4:7.40:0,7,151	1/1:1,5:5:5.86:99,6,0	1/1:1,11:12:8.83:122,9,0	1/1:0,12:11:12:261,12,0	0/0:20,0:15:37.21:0,37,813	0/0:15,0:14:9.68:0,10,749	0/0:19,0:17:40.69:0,41,897	0/0:11,0:9:18.02:0,18,313
chr10	74856210	.	AG	A	3103.12	PASS	AB=0.958;AC=41;AF=0.732;AN=56;BaseQRankSum=4.084;DP=427;FS=11.085;HRun=1;HaplotypeScore=63.6051;InbreedingCoeff=0.4337;MQ=54.08;MQ0=14;MQRankSum=-0.983;QD=9.13;ReadPosRankSum=-0.522;VQSLOD=-0.2863;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,1:24:17.21:317,17,0	0/0:11,0:11:24.83:0,25,160	0/1:11,0:6:14.55:15,0,46	0/1:18,1:7:15.01:21,0,15	0/0:31,2:33:3.41:0,3,399	0/1:10,1:10:27.32:27,0,86	0/0:11,1:10:18.72:0,19,156	0/0:24,0:22:14.14:0,14,291	1/1:11,0:10:8.08:36,8,0	1/1:8,2:10:27.12:175,27,0	1/1:13,0:12:18.44:143,18,0	1/1:13,0:13:20.60:175,21,0	1/1:12,0:10:23.98:171,24,0	0/0:7,0:7:7.53:0,8,101	0/1:11,1:12:23.46:23,0,76	1/1:13,0:11:29.67:194,30,0	0/1:29,0:25:34.03:34,0,251	1/1:17,1:15:32.04:184,32,0	1/1:26,2:25:57.91:411,58,0	1/1:22,0:20:50.03:334,50,0	1/1:3,1:4:5.32:64,5,0	1/1:6,0:5:5.65:31,6,0	1/1:11,0:11:8.60:52,9,0	1/1:12,0:11:11.20:55,11,0	1/1:19,0:14:34.15:259,34,0	1/1:14,0:13:27.09:172,27,0	1/1:20,0:18:44.74:307,45,0	1/1:7,0:6:11.80:84,12,0
chr10	74856909	.	GGTGTGTGTGTGTGTGTGT	G	1607.16	PASS	AB=0.891;AC=8;AF=0.148;AN=54;BaseQRankSum=5.918;DP=485;FS=13.822;HRun=0;HaplotypeScore=207.7356;InbreedingCoeff=0.4183;MQ=63.16;MQ0=11;MQRankSum=-2.077;QD=18.26;ReadPosRankSum=0.834;VQSLOD=1.7654;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:28:21.07:0,21,924	0/0:6,0:4:3.01:0,3,73	./.	0/0:29,0:20:6.91:0,7,83	0/0:22,0:22:36.12:0,36,2053	0/0:15,0:15:10.75:0,11,498	0/0:22,0:22:15.87:0,16,750	0/0:24,0:24:17.26:0,17,280	0/0:14,0:14:21.07:0,21,1335	0/0:17,0:16:12.04:0,12,290	0/0:5,0:5:3.01:0,3,97	0/0:10,0:15:6.02:0,6,355	0/0:8,0:11:12.51:0,13,692	0/0:9,0:10:6:0,6,219	0/0:9,0:11:21.07:0,21,1258	0/0:9,0:13:6.02:0,6,189	0/0:46,0:46:63.20:0,63,3255	0/1:13,5:18:50.46:281,0,50	0/0:14,0:14:1.55:0,2,4	1/1:5,2:7:3.01:145,3,0	0/1:26,0:25:12.94:118,0,13	0/0:16,0:16:12.03:0,12,495	0/0:8,0:10:3.01:0,3,184	0/0:11,0:19:18.06:0,18,905	0/0:8,0:15:9.02:0,9,199	1/1:18,7:26:17.55:644,18,0	1/1:6,5:11:12.51:554,13,0	0/0:6,0:6:0.47:0,0,1
chr10	74857241	.	GTT	G	9548.05	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=11.973;DP=611;FS=4.895;HRun=11;HaplotypeScore=89.9123;InbreedingCoeff=0.9686;MQ=63.63;MQ0=4;MQRankSum=-0.670;QD=24.05;ReadPosRankSum=4.341;VQSLOD=4.8343;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,46:59:98.14:1259,98,0	0/0:5,0:4:12.04:0,12,185	0/0:19,0:15:19.81:0,20,266	0/0:18,0:11:6.33:0,6,39	0/0:18,1:19:16.19:0,16,582	0/0:21,0:22:56.68:0,57,837	0/0:24,0:27:73.69:0,74,1017	0/0:26,0:26:45.14:0,45,656	1/1:1,20:21:57.14:605,57,0	1/1:4,19:23:57.13:606,57,0	1/1:1,12:13:33.07:349,33,0	1/1:2,26:28:75.14:785,75,0	1/1:2,20:22:57.14:605,57,0	0/0:17,0:17:45.15:0,45,692	0/0:18,0:22:61.66:0,62,827	1/1:4,16:20:42.08:447,42,0	0/0:36,0:37:96.31:0,96,1433	1/1:2,19:21:48.11:511,48,0	1/1:8,11:18:23.97:255,24,0	1/1:3,12:15:36.08:380,36,0	1/1:3,25:28:66.13:702,66,0	1/1:5,8:13:24.04:255,24,0	1/1:0,13:13:36.09:382,36,0	1/1:5,25:29:63.14:671,63,0	1/1:2,13:15:33.07:351,33,0	1/1:2,25:26:66.07:682,66,0	1/1:2,24:26:57.08:607,57,0	1/1:0,4:4:9.02:96,9,0
chr10	74858563	.	A	ACT	20935.03	PASS	AB=0.917;AC=37;AF=0.661;AN=56;BaseQRankSum=-11.856;DP=690;FS=4.508;HRun=0;HaplotypeScore=75.6657;InbreedingCoeff=0.9200;MQ=70.93;MQ0=3;MQRankSum=-0.441;QD=45.61;ReadPosRankSum=6.105;VQSLOD=6.4423;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,47:45:99:2118,114,0	0/1:10,1:11:22.70:23,0,387	0/0:24,0:22:53.44:0,53,658	0/0:11,0:11:20.53:0,21,251	0/0:22,0:22:66.21:0,66,932	0/0:33,0:33:96.30:0,96,1360	0/0:18,0:18:54.18:0,54,794	0/0:47,0:47:99:0,138,1962	1/1:0,17:17:39.13:725,39,0	1/1:1,33:34:98.88:1644,99,0	1/1:0,16:16:33.11:613,33,0	1/1:0,19:19:45.03:835,45,0	1/1:2,23:25:69.24:1281,69,0	0/0:18,0:18:48.15:0,48,689	0/0:26,0:26:72.21:0,72,981	1/1:0,20:20:51.17:943,51,0	0/0:32,0:32:90.27:0,90,1283	1/1:1,34:35:90.31:1673,90,0	1/1:0,14:15:42.12:722,42,0	1/1:5,15:20:45.15:837,45,0	1/1:1,17:19:45.15:837,45,0	1/1:0,28:28:78.11:1373,78,0	1/1:0,19:19:54.10:965,54,0	1/1:1,20:20:47.95:858,48,0	1/1:0,27:27:66.23:1228,66,0	1/1:1,32:33:99:1807,99,0	1/1:0,37:37:96.33:1785,96,0	1/1:2,14:16:36.12:669,36,0
chr10	74859883	.	CCTCT	C	7727.83	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.075;DP=670;FS=0.727;HRun=0;HaplotypeScore=138.3376;InbreedingCoeff=0.9965;MQ=81.26;MQ0=2;MQRankSum=-4.060;QD=45.73;ReadPosRankSum=4.677;VQSLOD=5.2668;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:38:84.29:1626,84,0	0/0:12,0:12:33.08:0,33,842	0/0:20,0:20:57.20:0,57,1488	0/0:22,0:22:60.08:0,60,1452	0/0:21,0:21:63.20:0,63,1667	0/0:24,0:24:69.24:0,69,1812	0/0:40,0:40:99:0,120,3154	0/0:32,0:31:96.33:0,96,2577	1/1:0,21:21:51.17:987,51,0	0/0:24,0:24:66.23:0,66,1738	0/0:8,0:8:24.08:0,24,617	1/1:0,27:27:69.24:1313,69,0	1/1:0,22:21:57.20:1104,57,0	0/0:22,0:22:63.22:0,63,1715	0/0:35,0:35:99:0,105,2773	0/0:26,0:26:78.27:0,78,2094	0/0:30,0:30:87.30:0,87,2347	0/0:22,0:22:66.23:0,66,1727	0/0:29,0:29:87.30:0,87,2315	0/0:15,0:15:45.14:0,45,1168	0/0:46,0:46:99:0,129,3497	1/1:0,18:17:45.15:845,45,0	1/1:0,12:12:26.94:517,27,0	1/1:0,31:31:68.30:1336,68,0	0/0:13,0:13:36.12:0,36,985	0/0:20,0:20:60.21:0,60,1559	0/0:35,0:35:99:0,105,2774	0/0:5,0:5:15.05:0,15,397
chr10	74860550	.	C	CT	2781.64	PASS	AB=0.852;AC=19;AF=0.339;AN=56;BaseQRankSum=10.990;DP=567;FS=2.671;HRun=4;HaplotypeScore=110.3427;InbreedingCoeff=0.5230;MQ=66.43;MQ0=1;MQRankSum=-4.101;QD=10.19;ReadPosRankSum=3.531;VQSLOD=1.1580;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:30,3:33:37.57:552,38,0	0/0:10,0:10:27.08:0,27,306	0/1:29,0:19:15.67:16,0,242	0/0:13,0:6:15.01:0,15,147	0/0:21,0:21:48.11:0,48,531	0/0:14,0:14:42.12:0,42,475	0/0:24,0:24:66.16:0,66,734	0/0:29,1:30:66.17:0,66,744	1/1:18,0:18:35.93:310,36,0	0/1:8,9:17:4.94:99,0,5	1/1:14,3:18:16.99:186,17,0	0/1:16,2:18:14.72:227,0,15	0/1:20,0:20:41.66:249,0,42	0/0:22,0:22:62.71:0,63,653	0/0:27,0:27:77.01:0,77,842	0/1:7,10:17:26.12:65,0,26	0/0:31,0:31:83.42:0,83,1004	0/0:13,0:14:7.05:0,7,123	0/1:15,1:17:0.33:0,0,66	0/0:16,0:19:16.15:0,16,189	0/0:11,0:11:21.87:0,22,104	1/1:18,1:19:45.88:394,46,0	1/1:18,1:19:25.77:310,26,0	1/1:21,2:23:36.05:345,36,0	0/1:20,5:25:0.31:219,0,0	0/0:19,1:20:27.84:0,28,138	0/0:30,0:32:56.64:0,57,298	0/0:5,0:5:10.37:0,10,49
chr10	74860551	.	TTTTC	T	5601.28	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=3.169;DP=565;FS=22.159;HRun=0;HaplotypeScore=129.4254;InbreedingCoeff=0.4574;MQ=66.45;MQ0=1;MQRankSum=-3.951;QD=19.86;ReadPosRankSum=-0.434;VQSLOD=2.8687;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,26:32:71.83:1159,72,0	0/0:10,0:10:30.05:0,30,617	0/0:29,0:19:44.52:0,45,527	0/0:13,0:6:14.54:0,15,130	0/0:20,0:20:50.62:0,51,1074	0/0:15,0:15:45.02:0,45,747	0/0:25,0:25:74.15:0,74,1319	0/0:29,0:29:67.34:0,67,1337	1/1:1,17:18:35.91:675,36,0	0/1:17,0:17:62.49:62,0,171	0/1:19,0:19:81.78:82,0,206	1/1:6,12:18:41.65:582,42,0	1/1:11,9:20:53.36:648,53,0	0/0:22,0:22:62.12:0,62,1029	0/0:26,0:26:72.57:0,73,1391	0/0:17,0:17:22.74:0,23,207	0/0:33,0:32:99:0,99,1930	0/0:14,0:14:3.51:0,4,249	0/1:17,0:17:62.53:63,0,134	0/1:19,0:19:12.32:12,0,343	0/0:10,0:10:5.74:0,6,109	1/1:4,15:19:50.91:802,51,0	1/1:3,16:19:47.43:760,47,0	1/1:5,17:22:38.92:651,39,0	0/1:25,0:25:90.43:90,0,358	0/0:20,0:20:7.43:0,7,218	0/1:32,0:32:13:13,0,497	0/1:5,0:5:0.54:1,0,44
chr10	74860560	.	T	TC	2592.89	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=8.392;DP=579;FS=4.651;HRun=0;HaplotypeScore=110.1370;InbreedingCoeff=0.8945;MQ=66.15;MQ0=1;MQRankSum=-1.471;QD=14.49;ReadPosRankSum=6.216;VQSLOD=5.2885;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:30,4:34:72.93:614,73,0	0/0:11,0:11:30.10:0,30,416	0/1:29,0:19:11.58:12,0,300	0/0:12,0:5:9.65:0,10,56	0/0:21,0:21:55.80:0,56,696	0/0:16,0:16:45.11:0,45,552	0/0:27,0:27:71.93:0,72,917	0/0:31,0:31:85.60:0,86,974	1/1:17,1:18:41.55:318,42,0	0/0:21,0:21:46.69:0,47,410	0/0:18,0:18:35.22:0,35,266	1/1:14,3:17:20.15:272,20,0	1/1:10,8:18:24.31:435,24,0	0/0:20,0:20:60.08:0,60,713	0/0:27,0:27:81.23:0,81,1067	0/0:14,0:14:13.62:0,14,159	0/0:34,0:33:99:0,102,1270	0/0:14,0:14:37.34:0,37,247	0/0:17,0:17:31.36:0,31,207	0/0:20,0:20:51.79:0,52,390	0/0:9,0:9:25.33:0,25,140	1/1:16,3:19:31.79:371,32,0	1/1:19,3:22:34.86:427,35,0	1/1:20,2:22:24.97:345,25,0	0/0:26,0:26:40.43:0,40,390	0/0:26,0:26:53.24:0,53,334	0/0:32,0:32:87.95:0,88,639	0/0:4,0:4:11.38:0,11,65
chr10	74861910	.	T	TC	3940.16	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.804;DP=656;FS=5.638;HRun=3;HaplotypeScore=61.4141;InbreedingCoeff=0.9979;MQ=87.77;MQ0=0;MQRankSum=-1.259;QD=33.97;ReadPosRankSum=3.062;VQSLOD=4.2734;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,44:46:99:1613,117,0	0/0:10,0:10:30.08:0,30,348	0/0:23,0:23:47.09:0,47,523	0/0:23,0:23:59.74:0,60,594	0/0:18,0:18:45.13:0,45,529	0/0:26,0:26:78.22:0,78,912	0/0:22,0:22:60.14:0,60,684	0/0:36,0:35:93.24:0,93,1082	0/0:15,0:15:42.12:0,42,493	1/1:2,24:26:72.20:951,72,0	1/1:2,14:16:33.06:432,33,0	0/0:22,0:22:66.15:0,66,762	0/0:23,0:23:63.19:0,63,752	0/0:25,0:25:69.18:0,69,802	0/0:30,0:30:87.24:0,87,1014	1/1:0,16:16:42.14:579,42,0	0/0:30,0:30:87.25:0,87,1029	0/0:36,0:36:99:0,99,1164	0/0:28,0:28:74.52:0,75,852	0/0:26,0:26:72.11:0,72,798	0/0:25,0:25:66.18:0,66,770	0/0:27,0:27:71.56:0,72,819	0/0:21,0:21:54.14:0,54,624	0/0:21,0:21:60.16:0,60,695	1/1:1,11:12:27.09:364,27,0	0/0:21,1:22:18.77:0,19,637	0/0:17,0:17:51.16:0,51,610	0/0:14,0:14:36.11:0,36,431
chr10	74862624	.	C	CT	3460.18	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=3.820;DP=651;FS=0.820;HRun=9;HaplotypeScore=68.9373;InbreedingCoeff=0.9742;MQ=59.86;MQ0=10;MQRankSum=0.976;QD=19.55;ReadPosRankSum=4.137;VQSLOD=4.0621;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,29:37:54.15:597,54,0	0/0:10,0:9:23.99:0,24,208	0/0:11,0:9:5.96:0,6,52	0/0:12,0:9:14.58:0,15,111	0/0:24,0:23:53.97:0,54,468	0/0:19,0:19:50.99:0,51,443	0/0:21,0:20:47.97:0,48,417	0/0:46,0:46:99:0,125,1067	1/1:7,14:22:15.89:386,16,0	0/0:32,0:32:65.61:0,66,560	0/0:23,0:22:50.95:0,51,443	1/1:9,22:31:34.12:604,34,0	1/1:6,19:24:28.10:537,28,0	0/0:12,0:12:23.98:0,24,208	0/0:28,0:28:56.94:0,57,495	0/0:24,0:24:68.97:0,69,595	0/0:25,0:24:62.98:0,63,547	0/0:19,1:20:26.13:0,26,323	0/0:35,0:34:74.91:0,75,641	0/0:27,0:27:68.94:0,69,595	0/0:15,0:15:41.98:0,42,365	1/1:6,15:20:39.09:419,39,0	1/1:2,19:21:39.40:418,39,0	1/1:2,17:19:45.12:498,45,0	0/0:21,0:20:50.98:0,51,443	0/0:25,0:25:59.95:0,60,514	0/0:27,0:27:62.95:0,63,543	0/0:17,0:16:41.99:0,42,365
chr10	74863832	.	CTT	C	3774.13	PASS	AB=0.720;AC=17;AF=0.304;AN=56;BaseQRankSum=-1.093;DP=637;FS=2.126;HRun=13;HaplotypeScore=99.1078;InbreedingCoeff=0.7869;MQ=75.75;MQ0=1;MQRankSum=0.391;QD=18.50;ReadPosRankSum=3.315;VQSLOD=3.2656;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:31:68.99:719,69,0	0/0:7,0:10:28.42:0,28,298	0/0:21,0:16:23.79:0,24,211	0/1:20,0:16:1.17:1,0,127	0/0:26,0:28:77.17:0,77,970	0/0:15,0:15:30.07:0,30,384	0/0:12,0:13:32.59:0,33,427	0/0:34,0:35:74.53:0,75,968	1/1:1,27:28:75.12:727,75,0	0/0:5,0:21:48.53:0,49,453	0/0:7,0:22:55.36:0,55,466	1/1:2,20:22:54.08:524,54,0	1/1:3,20:23:51.06:495,51,0	0/0:17,0:18:50.64:0,51,685	0/0:29,0:32:77.73:0,78,1047	0/0:6,0:31:54.01:0,54,547	0/0:28,0:29:84.19:0,84,1121	0/0:10,0:38:65.27:0,65,257	0/0:6,1:23:40.13:0,40,140	0/1:2,2:13:28.81:29,0,73	0/0:3,0:17:27.45:0,27,94	1/1:3,18:22:44.88:486,45,0	1/1:2,16:18:48.05:465,48,0	1/1:3,11:14:33.03:320,33,0	0/0:6,0:31:60.09:0,60,603	0/0:8,1:24:18.21:0,18,151	0/0:5,0:23:20.57:0,21,179	0/1:5,1:13:8.63:9,0,40
chr10	74866605	.	T	TCC	7592.90	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-15.158;DP=634;FS=13.153;HRun=2;HaplotypeScore=81.1672;InbreedingCoeff=0.9964;MQ=59.50;MQ0=12;MQRankSum=-1.777;QD=48.06;ReadPosRankSum=1.953;VQSLOD=3.5156;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1539	0/0:10,0:10:30.10:0,30,434	0/0:39,0:11:26.96:0,27,325	0/0:45,0:20:51.17:0,51,723	0/0:23,0:22:60.17:0,60,855	0/0:16,0:16:45.15:0,45,638	0/0:26,0:24:69.23:0,69,1003	0/0:31,0:28:72.24:0,72,1036	0/0:18,0:18:51.14:0,51,726	0/0:15,0:15:45.15:0,45,663	0/0:19,0:19:57.17:0,57,783	0/0:22,0:22:63.13:0,63,891	0/0:20,0:20:60.20:0,60,869	0/0:16,0:16:48.16:0,48,706	0/0:17,0:17:36.12:0,36,527	0/0:28,0:28:81.27:0,81,1181	0/0:21,0:21:57.19:0,57,832	1/1:1,20:21:57.20:1045,57,0	1/1:3,13:16:14.60:650,15,0	1/1:0,16:16:48.16:879,48,0	1/1:2,31:34:90.31:1643,90,0	0/0:17,0:17:51.17:0,51,738	0/0:18,0:18:33.11:0,33,477	0/0:21,0:21:63.21:0,63,919	0/0:16,0:16:48.16:0,48,705	1/1:3,22:25:66.23:1200,66,0	1/1:2,24:26:60.21:1093,60,0	1/1:1,19:20:60.21:1083,60,0
chr10	74866893	.	CTGCCTGCCACTGCCTGCCAT	C	721.95	PASS	AB=1.000;AC=7;AF=0.269;AN=26;BaseQRankSum=2.210;DP=227;FS=8.121;HRun=0;HaplotypeScore=47.0242;InbreedingCoeff=0.5165;MQ=18.22;MQ0=161;MQRankSum=-1.291;QD=31.39;ReadPosRankSum=2.210;VQSLOD=0.2883;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:4:9.03:0,9,394	./.	./.	./.	0/0:9,0:5:9.03:0,9,579	./.	./.	./.	0/0:10,0:6:18.06:0,18,937	./.	./.	1/1:1,1:1:3.01:173,3,0	./.	0/0:10,0:1:3.01:0,3,38	1/1:8,0:1:0.47:1,0,0	./.	0/0:22,0:1:3.01:0,3,129	./.	0/0:6,0:6:6.39:0,6,657	./.	./.	1/1:0,5:5:12.04:639,12,0	./.	0/0:11,0:10:9.97:0,10,254	0/0:7,0:3:6.02:0,6,200	0/1:8,0:2:0:0,0,0	0/0:12,0:9:12.04:0,12,381
chr10	74867143	.	A	AAAG	289.50	PASS	AB=0.818;AC=14;AF=0.292;AN=48;BaseQRankSum=4.402;DP=378;FS=8.956;HRun=0;HaplotypeScore=49.2888;InbreedingCoeff=0.6005;MQ=35.61;MQ0=88;MQRankSum=-1.927;QD=3.53;ReadPosRankSum=-1.197;VQSLOD=0.0904;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:19:8.05:101,8,0	1/1:4,0:4:2.29:9,2,0	./.	./.	0/0:19,0:16:12.80:0,13,220	0/0:15,0:14:26.50:0,26,297	0/0:15,0:10:17.70:0,18,152	0/0:17,0:14:35.52:0,36,511	1/1:3,4:7:3.01:68,3,0	0/0:20,0:15:42.01:0,42,493	0/0:15,0:16:15.36:0,15,161	1/1:3,4:7:6.02:134,6,0	1/1:4,0:3:3.01:45,3,0	0/0:11,0:9:17.89:0,18,210	0/0:8,0:7:18.04:0,18,246	0/1:13,0:11:39.41:39,0,310	0/0:20,0:16:39.06:0,39,569	0/0:12,0:8:14.95:0,15,211	0/0:10,0:10:30.04:0,30,419	0/0:16,0:14:14.53:0,15,184	0/0:17,0:14:11.82:0,12,220	./.	1/1:7,1:8:5.80:32,6,0	./.	0/1:3,0:6:7.83:8,0,70	0/0:20,0:19:54.03:0,54,626	0/0:14,0:13:23.74:0,24,343	0/0:14,0:16:23.96:0,24,295
chr10	74869445	.	CCTTTTCTTTT	C	4865.60	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=1.822;DP=815;FS=2.385;HRun=0;HaplotypeScore=262.4252;InbreedingCoeff=0.9317;MQ=51.92;MQ0=25;MQRankSum=-3.936;QD=43.06;ReadPosRankSum=0.578;VQSLOD=4.5547;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:37.10:0,37,1092	0/0:3,0:7:12.03:0,12,123	0/0:90,0:31:12.51:0,13,218	0/0:105,0:25:24.08:0,24,566	0/0:32,0:32:78.27:0,78,3663	0/0:10,0:27:45.09:0,45,455	0/0:5,0:16:27.02:0,27,364	0/0:41,0:41:42.11:0,42,1281	0/0:24,0:26:51.63:0,52,1773	1/1:11,24:35:72.11:1905,72,0	1/1:6,16:22:37.37:821,37,0	0/0:38,0:38:61.08:0,61,1486	0/0:24,0:24:48.03:0,48,1286	0/0:29,0:29:66.23:0,66,3206	0/0:28,0:28:66.23:0,66,3175	1/1:12,22:34:42.45:1258,42,0	0/0:27,0:27:57.20:0,57,2758	0/0:15,0:15:12.03:0,12,290	0/0:13,0:12:15.05:0,15,507	0/0:16,0:16:18.06:0,18,573	0/0:12,0:12:6.02:0,6,187	0/0:13,0:13:26.96:0,27,814	0/0:22,0:21:43.46:0,43,1275	0/0:15,0:15:21.47:0,21,478	1/1:9,12:22:30.10:882,30,0	0/0:25,0:25:57.19:0,57,1846	0/0:41,0:40:66.21:0,66,2208	0/0:7,0:7:12.04:0,12,346
chr10	74869450	.	T	TCTTTCCTCCC	10174.63	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=-7.242;DP=815;FS=4.210;HRun=0;HaplotypeScore=244.2895;InbreedingCoeff=0.4463;MQ=50.47;MQ0=25;MQRankSum=-6.660;QD=34.14;ReadPosRankSum=-1.088;VQSLOD=3.8413;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:30.57:0,31,1440	0/0:7,0:7:18.06:0,18,465	0/0:91,0:32:17.72:0,18,741	0/0:101,0:20:13.98:0,14,580	0/0:31,0:31:87.28:0,87,2647	0/1:27,0:27:49.63:50,0,1255	0/1:17,0:17:99:125,0,584	0/0:36,0:36:81.26:0,81,2138	0/1:25,0:25:72.96:73,0,1214	0/1:35,0:35:18.82:19,0,1868	0/1:20,0:20:37.34:37,0,644	0/0:36,0:36:73.29:0,73,1844	0/0:23,0:23:62.72:0,63,1333	0/0:28,0:28:81.27:0,81,2422	0/0:26,0:26:69.24:0,69,2143	0/1:33,0:33:7.27:7,0,1345	0/0:28,0:28:75.22:0,75,2177	1/1:3,13:17:0.11:524,0,0	1/1:4,7:15:18.03:1180,18,0	1/1:1,16:19:24.08:1040,24,0	1/1:2,6:12:6.02:189,6,0	0/0:14,0:14:37.35:0,37,800	0/0:21,0:20:56.55:0,57,1244	0/0:15,0:15:2.75:0,3,295	0/0:22,0:22:17.95:0,18,1065	1/1:2,20:26:72.24:2908,72,0	1/1:2,31:40:66.70:3393,67,0	1/1:2,5:9:11.99:630,12,0
chr10	74870473	.	A	AG	7711.90	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-13.937;DP=818;FS=1.699;HRun=5;HaplotypeScore=88.2612;InbreedingCoeff=0.9641;MQ=72.34;MQ0=1;MQRankSum=-0.623;QD=32.00;ReadPosRankSum=2.804;VQSLOD=5.3634;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,35:37:84.27:1105,84,0	0/0:17,0:17:51.12:0,51,543	0/0:27,0:24:53.41:0,53,552	0/0:21,0:20:30.51:0,31,400	0/0:27,0:27:75.19:0,75,804	0/0:19,0:19:45.10:0,45,476	0/0:31,0:31:77.62:0,78,808	0/0:38,0:38:86.57:0,87,902	1/1:0,32:32:93.30:1219,93,0	0/0:33,0:33:84.21:0,84,898	0/0:21,0:21:51.11:0,51,540	1/1:5,52:57:99:1973,150,0	1/1:4,28:32:87.28:1134,87,0	0/0:39,0:39:99:0,117,1248	0/0:53,0:53:99:0,141,1499	0/0:28,2:30:2.25:0,2,719	0/0:28,0:28:84.21:0,84,902	0/0:10,0:10:27.07:0,27,290	0/0:30,0:30:81.20:0,81,868	0/0:16,0:15:42.10:0,42,451	0/0:40,0:40:99:0,111,1192	1/1:3,20:23:48.15:626,48,0	1/1:0,24:24:38.96:513,39,0	1/1:3,32:35:87.27:1142,87,0	0/0:26,0:25:69.17:0,69,741	0/0:34,0:34:96.24:0,96,1029	0/0:30,0:30:87.22:0,87,932	0/0:7,0:7:21.05:0,21,225
chr10	74871043	.	T	TTCCTTG	25081.88	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-9.622;DP=556;FS=2.989;HRun=0;HaplotypeScore=98.3255;InbreedingCoeff=0.9766;MQ=80.98;MQ0=0;MQRankSum=-15.989;QD=72.70;ReadPosRankSum=2.136;VQSLOD=5.2422;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,20:29:42.14:1424,42,0	0/0:6,0:6:18.06:0,18,415	0/0:28,0:26:62.68:0,63,1151	0/0:15,0:14:26.97:0,27,476	0/0:17,0:17:51.16:0,51,1130	0/0:20,0:20:54.16:0,54,1157	0/0:15,0:15:42.14:0,42,967	0/0:33,0:32:84.26:0,84,1711	1/1:3,22:27:63.22:2160,63,0	1/1:1,20:24:66.19:1997,66,0	1/1:2,12:16:38.83:1074,39,0	1/1:7,23:32:72.25:2510,72,0	1/1:5,23:28:60.21:2093,60,0	0/0:16,0:16:48.12:0,48,1057	0/0:32,0:32:96.31:0,96,2086	1/1:2,19:24:45.06:1570,45,0	0/0:29,0:29:84.26:0,84,1802	1/1:1,8:9:12.04:420,12,0	1/1:6,11:18:42.11:1306,42,0	1/1:5,11:16:39.05:1245,39,0	1/1:1,3:6:6.02:190,6,0	1/1:5,9:14:27.09:925,27,0	1/1:2,9:11:30.10:982,30,0	1/1:2,9:12:17.98:507,18,0	1/1:0,18:18:54.19:1872,54,0	1/1:7,21:32:81.07:2325,81,0	1/1:4,17:21:51.18:1749,51,0	1/1:1,6:7:21.07:732,21,0
chr10	74871248	.	CTGTGTG	C	917.03	PASS	AB=0.712;AC=20;AF=0.400;AN=50;BaseQRankSum=3.171;DP=512;FS=8.305;HRun=0;HaplotypeScore=120.7536;InbreedingCoeff=0.5270;MQ=62.92;MQ0=25;MQRankSum=-4.417;QD=5.56;ReadPosRankSum=1.549;VQSLOD=1.7170;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:18.05:0,18,297	0/0:11,0:10:12.01:0,12,163	./.	./.	0/0:11,0:11:9.03:0,9,210	0/0:19,0:21:12.04:0,12,322	0/0:15,0:15:6.02:0,6,135	0/0:33,0:30:6.56:0,7,30	0/0:14,0:14:0.96:0,1,312	1/1:7,0:9:6.02:82,6,0	1/1:12,0:13:3.01:42,3,0	0/0:18,0:19:26.86:0,27,340	0/0:18,0:18:17.74:0,18,197	0/0:12,0:12:5.03:0,5,127	0/1:11,4:16:12.73:56,0,13	1/1:13,0:16:9.03:126,9,0	0/1:13,1:24:48.88:55,0,49	1/1:16,0:17:6.02:84,6,0	1/1:11,3:13:9.02:146,9,0	1/1:7,4:10:3.01:60,3,0	./.	0/0:16,0:14:14.06:0,14,195	0/0:12,0:10:3.01:0,3,60	0/0:30,0:31:50.47:0,50,828	1/1:4,0:12:15.05:209,15,0	0/0:10,0:9:2.04:0,2,6	1/1:16,7:24:9.75:183,10,0	1/1:5,0:7:3.01:42,3,0
chr10	74872508	.	GAC	G	1039.44	PASS	AB=0.882;AC=28;AF=0.500;AN=56;BaseQRankSum=11.378;DP=629;FS=11.322;HRun=0;HaplotypeScore=91.8858;InbreedingCoeff=-0.1002;MQ=65.40;MQ0=4;MQRankSum=-3.974;QD=2.19;ReadPosRankSum=1.936;VQSLOD=1.1951;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,4:26:71.61:72,0,395	0/1:9,1:10:13.16:13,0,232	0/0:16,0:13:12:0,12,132	0/1:18,1:11:21.13:21,0,75	0/1:13,4:18:99:110,0,307	0/1:20,3:24:40.42:40,0,416	0/0:29,1:30:19.80:0,20,679	0/1:29,2:32:40.40:40,0,438	0/1:16,2:18:41.30:41,0,264	0/1:20,3:24:6.23:6,0,465	0/1:8,1:9:10.13:10,0,264	0/1:27,3:30:51.42:51,0,561	0/1:20,3:23:54.44:54,0,494	0/1:27,2:29:0.16:0,0,548	0/0:23,2:25:16.98:0,17,702	0/0:27,1:28:25.99:0,26,817	0/1:31,2:35:32.72:33,0,955	0/1:18,2:20:4.12:4,0,361	1/1:10,0:14:11.36:56,11,0	1/1:5,0:8:5.59:26,6,0	1/1:41,0:43:20.33:120,20,0	0/0:24,0:24:19.96:0,20,659	0/1:9,2:11:58.51:59,0,162	0/0:31,0:31:21.57:0,22,620	0/1:18,4:23:99:103,0,413	1/1:12,0:19:26.24:127,26,0	1/1:9,0:29:35.97:173,36,0	1/1:4,0:9:11.36:56,11,0
chr10	74873055	.	T	TTA	7036.35	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-3.441;DP=759;FS=1.978;HRun=0;HaplotypeScore=115.2437;InbreedingCoeff=0.9976;MQ=78.22;MQ0=1;MQRankSum=-5.107;QD=37.23;ReadPosRankSum=2.135;VQSLOD=7.0918;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,19:27:21.69:903,22,0	0/0:20,0:20:42.14:0,42,540	0/0:42,0:40:76.92:0,77,956	0/0:18,0:17:30.01:0,30,338	0/0:35,0:34:99:0,99,1190	0/0:28,0:28:81.24:0,81,1014	0/0:11,0:11:27.09:0,27,347	0/0:39,0:39:87.23:0,87,1046	1/1:7,19:25:54.18:903,54,0	0/0:38,0:38:99:0,99,1242	0/0:19,0:19:45.15:0,45,577	1/1:8,29:37:90.31:1515,90,0	1/1:12,15:27:69.17:1045,69,0	0/0:27,0:27:75.16:0,75,892	0/0:34,0:34:84.21:0,84,1012	0/0:38,0:38:99:0,105,1322	0/0:30,0:30:78.22:0,78,973	0/0:15,0:15:39.13:0,39,498	0/0:21,0:21:54.08:0,54,639	0/0:23,0:23:54.13:0,54,675	0/0:28,0:28:66.16:0,66,805	1/1:7,22:29:60.20:995,60,0	1/1:5,21:26:60.21:1012,60,0	1/1:2,15:17:41.63:663,42,0	0/0:33,0:33:81.21:0,81,989	0/0:29,0:29:75.23:0,75,953	0/0:35,0:35:69.22:0,69,880	0/0:7,0:7:18.06:0,18,232
chr10	74873124	.	C	CAGCTTGTACGTAGGGGTCAG	60065.55	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=3.552;DP=739;FS=0.579;HRun=0;HaplotypeScore=367.4580;InbreedingCoeff=0.9856;MQ=74.92;MQ0=0;MQRankSum=-19.294;QD=169.68;ReadPosRankSum=-2.373;VQSLOD=3.7605;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,6:33:87.30:5332,87,0	0/0:20,0:20:60.18:0,60,2998	0/0:22,0:22:51.65:0,52,2344	0/0:21,0:21:63.22:0,63,2437	0/0:23,0:22:60.21:0,60,2925	0/0:27,0:27:76.50:0,77,3757	0/0:22,0:22:60.21:0,60,2963	0/0:39,0:39:99:0,108,5121	1/1:26,8:34:84.27:5594,84,0	0/0:37,0:37:99:0,108,5389	0/0:25,0:25:69.24:0,69,3570	1/1:36,11:47:99:9075,129,0	1/1:13,7:23:53.84:4228,54,0	0/0:18,0:18:54.11:0,54,2306	0/0:35,0:35:99:0,99,5144	0/0:30,0:30:90.31:0,90,4564	0/0:30,0:30:90.31:0,90,4529	0/0:14,0:14:42.07:0,42,1594	1/1:17,4:24:69.15:3557,69,0	1/1:15,8:26:63.21:4461,63,0	1/1:20,5:29:39.13:3033,39,0	1/1:18,5:24:63.19:3022,63,0	1/1:11,5:16:42.14:3146,42,0	1/1:18,4:21:33.11:2185,33,0	0/0:22,0:22:63.17:0,63,3197	1/1:20,10:34:99:7350,99,0	1/1:25,11:39:99:8719,105,0	1/1:1,1:2:6.02:362,6,0
chr10	74874160	.	T	TAA	2044.13	PASS	AB=0.784;AC=18;AF=0.321;AN=56;BaseQRankSum=3.261;DP=519;FS=2.567;HRun=13;HaplotypeScore=84.0686;InbreedingCoeff=0.6000;MQ=73.01;MQ0=2;MQRankSum=0.533;QD=9.83;ReadPosRankSum=-3.665;VQSLOD=1.4984;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:48.43:0,48,424	0/0:5,0:5:12:0,12,106	0/0:20,0:12:12.15:0,12,85	0/1:12,0:10:15.93:16,0,38	0/0:35,0:36:47.24:0,47,598	0/0:32,0:32:68.61:0,69,647	0/0:19,0:20:47.44:0,47,390	0/0:23,0:25:31.39:0,31,372	0/0:9,0:9:20.96:0,21,178	0/1:12,1:28:0.31:107,0,0	0/1:10,2:28:34.58:147,0,35	0/1:14,1:15:8.87:9,0,222	0/0:22,0:22:53.86:0,54,463	0/0:14,0:16:35.65:0,36,298	0/0:22,0:22:44.64:0,45,377	0/1:6,0:19:20.63:56,0,21	0/0:16,0:16:41.92:0,42,358	0/0:8,0:8:20.97:0,21,185	1/1:10,6:16:32.76:392,33,0	1/1:4,17:22:53.87:582,54,0	0/1:3,0:3:0:0,0,0	0/0:14,0:16:29.53:0,30,284	0/0:12,0:15:20.78:0,21,225	0/0:20,0:23:59.70:0,60,512	1/1:1,0:12:12.48:43,12,0	1/1:13,13:26:39.02:457,39,0	1/1:6,8:16:14.52:157,15,0	1/1:5,4:10:21.95:268,22,0
chr10	74874270	.	AAAAG	A	9194.61	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=13.071;DP=582;FS=6.045;HRun=0;HaplotypeScore=91.5888;InbreedingCoeff=0.9652;MQ=60.48;MQ0=8;MQRankSum=-0.767;QD=28.29;ReadPosRankSum=3.574;VQSLOD=4.2237;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:42.08:705,42,0	0/0:13,0:13:33.11:0,33,780	0/0:30,0:15:35.61:0,36,539	0/0:38,0:13:11.71:0,12,249	0/0:27,0:27:66.22:0,66,1553	0/0:29,0:29:78.27:0,78,1856	0/0:16,0:16:45.15:0,45,1075	0/0:26,0:26:63.10:0,63,1323	1/1:4,8:12:18.06:302,18,0	1/1:3,18:21:54.14:820,54,0	1/1:7,12:19:30.06:455,30,0	1/1:4,15:19:33.11:554,33,0	1/1:6,12:18:26.68:453,27,0	0/0:19,0:19:45.15:0,45,1070	0/0:22,0:22:60.20:0,60,1411	1/1:3,21:24:54.18:907,54,0	0/0:20,0:20:54.17:0,54,1195	0/0:17,0:17:39.09:0,39,885	1/1:3,14:17:42.14:660,42,0	1/1:12,22:34:48.16:788,48,0	1/1:1,5:6:6.02:101,6,0	1/1:3,13:16:24.04:373,24,0	1/1:7,8:15:11.87:201,12,0	1/1:3,11:14:21.07:353,21,0	1/1:8,21:27:42.14:705,42,0	1/1:5,14:18:39.08:580,39,0	1/1:8,25:33:66.23:1096,66,0	1/1:2,3:5:9.03:142,9,0
chr10	74875050	.	T	TA	514.63	PASS	AB=0.792;AC=8;AF=0.174;AN=46;BaseQRankSum=-4.245;DP=154;FS=8.944;HRun=10;HaplotypeScore=21.3064;InbreedingCoeff=0.4910;MQ=52.38;MQ0=17;MQRankSum=-0.347;QD=15.59;ReadPosRankSum=-1.550;VQSLOD=1.7621;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:2.98:0,3,25	0/0:4,0:4:11.99:0,12,98	0/0:11,0:3:1.33:0,1,41	0/0:6,0:4:8.39:0,8,50	0/0:10,0:10:17.20:0,17,138	0/0:7,0:7:11.97:0,12,98	0/0:1,0:1:3:0,3,25	0/0:24,0:17:47.92:0,48,390	0/0:3,0:3:5.99:0,6,49	./.	0/0:4,0:4:8.99:0,9,74	./.	0/0:3,0:3:5.99:0,6,49	0/0:1,0:1:3:0,3,25	0/0:8,0:7:14.98:0,15,123	./.	0/0:17,0:12:26.97:0,27,221	0/0:6,0:4:8.98:0,9,74	1/1:2,7:8:21.05:224,21,0	0/1:2,0:1:0:0,0,0	./.	./.	0/0:2,0:2:3:0,3,25	0/0:1,0:1:3:0,3,25	0/0:4,0:4:11.91:0,12,91	0/1:2,5:7:6.60:142,0,7	1/1:2,4:6:12.03:128,12,0	1/1:2,7:7:17.88:151,18,0
chr10	74875588	.	G	GA	18844.47	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-17.153;DP=728;FS=1.567;HRun=1;HaplotypeScore=62.7139;InbreedingCoeff=0.9994;MQ=86.23;MQ0=0;MQRankSum=-3.558;QD=42.16;ReadPosRankSum=5.996;VQSLOD=4.7102;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,43:43:99:1933,129,0	0/0:12,0:12:36.12:0,36,467	0/0:24,0:24:68.85:0,69,823	0/0:23,0:23:65.71:0,66,782	0/0:18,0:18:51.15:0,51,646	0/0:21,0:21:63.20:0,63,818	0/0:30,0:30:87.25:0,87,1100	0/0:45,0:45:99:0,132,1665	1/1:0,24:24:69.23:1034,69,0	1/1:1,37:38:99:1645,111,0	1/1:1,20:21:57.19:854,57,0	1/1:1,27:28:78.26:1169,78,0	1/1:1,29:30:78.26:1169,78,0	0/0:28,0:28:81.26:0,81,1051	0/0:34,0:34:99:0,99,1285	1/1:1,26:27:75.25:1124,75,0	0/0:32,0:32:93.23:0,93,1145	0/0:14,0:14:42.14:0,42,545	1/1:0,32:32:93.31:1391,93,0	1/1:1,22:23:63.21:943,63,0	1/1:1,34:35:99:1484,99,0	1/1:0,16:17:45.15:660,45,0	1/1:1,15:16:42.14:629,42,0	1/1:0,27:27:78.26:1169,78,0	1/1:0,16:16:48.16:719,48,0	1/1:1,28:29:81.23:1168,81,0	1/1:1,32:32:96.33:1438,96,0	1/1:0,8:8:21.07:315,21,0
chr10	74876469	.	G	GTT	4415.36	PASS	AB=0.924;AC=14;AF=0.250;AN=56;BaseQRankSum=7.219;DP=644;FS=0.710;HRun=0;HaplotypeScore=128.0638;InbreedingCoeff=0.4073;MQ=75.16;MQ0=5;MQRankSum=-3.563;QD=18.40;ReadPosRankSum=1.110;VQSLOD=5.1445;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:41.50:0,41,626	0/0:11,0:11:33.11:0,33,538	0/0:37,0:20:32.58:0,33,359	0/0:34,0:25:3.24:0,3,445	0/0:21,0:21:63.20:0,63,989	0/0:19,0:19:54.17:0,54,851	0/0:17,0:17:50.94:0,51,756	0/0:28,0:28:84.28:0,84,1317	0/0:18,0:18:51.42:0,51,356	1/1:5,25:33:85.39:1194,85,0	1/1:3,20:23:49.05:804,49,0	0/0:14,0:14:35.55:0,36,246	0/0:28,0:28:71.93:0,72,494	0/0:17,0:17:48.16:0,48,754	0/0:27,0:27:78.26:0,78,1238	1/1:2,25:28:59.85:889,60,0	0/0:20,0:20:57.19:0,57,909	0/0:16,0:16:48.16:0,48,758	0/1:24,0:24:99:189,0,149	0/1:27,0:28:80.58:81,0,238	0/1:7,0:7:28.32:28,0,31	0/0:19,0:19:31.69:0,32,335	0/0:22,0:22:58.73:0,59,398	0/0:15,0:15:44.58:0,45,309	1/1:1,27:30:69.18:1016,69,0	0/1:32,0:33:99:132,0,252	0/1:26,0:28:40.90:41,0,298	0/1:3,0:5:25.54:40,0,26
chr10	74876470	.	G	GTTTTT	6522.95	PASS	AB=0.944;AC=21;AF=0.375;AN=56;BaseQRankSum=9.448;DP=652;FS=4.181;HRun=8;HaplotypeScore=163.9865;InbreedingCoeff=0.9305;MQ=74.76;MQ0=5;MQRankSum=-6.342;QD=23.13;ReadPosRankSum=-1.554;VQSLOD=0.9570;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,1396	0/0:11,0:11:33.11:0,33,565	0/0:39,0:22:20.73:0,21,225	0/1:32,0:23:4.10:4,0,365	0/0:20,0:20:54.17:0,54,924	0/0:20,0:20:45.09:0,45,736	0/0:17,0:17:42.08:0,42,682	0/0:28,0:28:69.17:0,69,1177	0/0:18,0:18:50.92:0,51,703	1/1:35,0:36:91.94:719,92,0	1/1:23,0:23:53.04:363,53,0	0/0:14,0:14:32.97:0,33,474	0/0:29,0:29:71.66:0,72,966	0/0:17,0:17:42.09:0,42,692	0/0:27,0:27:68.65:0,69,1110	1/1:29,0:29:54.82:345,55,0	0/0:21,0:21:51.11:0,51,872	0/0:16,0:16:39.11:0,39,653	1/1:11,13:25:51.17:1182,51,0	1/1:12,16:28:42.14:1082,42,0	1/1:3,1:8:9.03:196,9,0	0/0:18,0:18:53.59:0,54,665	0/0:22,0:22:60.18:0,60,824	0/0:15,0:15:45.12:0,45,609	1/1:31,0:32:70.48:484,70,0	1/1:14,18:34:60.19:1388,60,0	1/1:14,11:26:23.74:569,24,0	1/1:6,0:6:12:191,12,0
chr10	74877143	.	CAACA	C	4779.48	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.765;DP=710;FS=11.687;HRun=0;HaplotypeScore=123.7006;InbreedingCoeff=0.9316;MQ=64.47;MQ0=2;MQRankSum=1.646;QD=25.56;ReadPosRankSum=2.560;VQSLOD=4.3620;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,26:41:63.21:1009,63,0	0/0:12,0:12:27.09:0,27,640	0/0:22,0:19:18.06:0,18,431	0/0:26,0:24:5.98:0,6,289	0/0:21,0:21:57.20:0,57,1305	0/0:26,0:26:60.21:0,60,1430	0/0:23,0:23:27.09:0,27,615	0/0:34,0:34:38.60:0,39,821	1/1:10,9:19:21.07:336,21,0	0/0:7,0:30:84.27:0,84,1354	0/0:7,0:24:48.43:0,48,745	1/1:11,14:25:33.11:528,33,0	1/1:10,7:17:18.06:288,18,0	0/0:31,0:31:66.21:0,66,1526	0/0:18,0:18:39.13:0,39,886	0/0:15,1:31:0.12:0,0,734	0/0:43,0:43:81.23:0,81,1786	0/0:23,0:22:42.14:0,42,988	0/0:23,0:22:34.36:0,34,777	0/0:19,0:19:36.12:0,36,856	0/0:24,0:24:42.14:0,42,999	1/1:5,15:20:39.09:596,39,0	1/1:8,20:28:57.14:912,57,0	1/1:11,25:36:71.05:1110,71,0	0/0:5,0:17:33.04:0,33,526	0/0:29,0:29:72.16:0,72,1592	0/0:38,0:38:78.26:0,78,1818	0/0:9,0:9:27.09:0,27,640
chr10	74879652	.	CGCTGG	C	4155.64	PASS	AB=0.730;AC=8;AF=0.143;AN=56;BaseQRankSum=11.393;DP=680;FS=3.547;HRun=0;HaplotypeScore=126.6049;InbreedingCoeff=0.7098;MQ=86.73;MQ0=1;MQRankSum=-3.563;QD=43.74;ReadPosRankSum=3.479;VQSLOD=3.6136;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,163,5123	0/0:12,0:12:33.11:0,33,993	0/0:25,0:25:69.24:0,69,2078	0/0:24,0:23:66.22:0,66,1898	0/0:25,0:25:75.26:0,75,2309	0/0:28,0:28:84.29:0,84,2545	0/0:28,0:28:81.24:0,81,2440	0/0:33,0:33:90.30:0,90,2654	0/0:28,0:28:84.29:0,84,2558	1/1:2,24:26:72.23:1464,72,0	1/1:0,15:15:27.09:586,27,0	0/0:28,0:28:78.27:0,78,2472	0/0:18,0:18:51.16:0,51,1545	0/0:23,0:23:69.24:0,69,2177	0/0:18,0:18:54.17:0,54,1642	0/1:1,18:19:40.98:1053,0,41	0/0:24,0:24:72.25:0,72,2224	0/0:20,0:20:54.19:0,54,1637	0/0:19,0:19:54.18:0,54,1473	0/1:17,1:18:10.94:11,0,1563	0/0:39,0:39:99:0,114,3558	0/0:21,0:21:60.19:0,60,1767	0/0:19,0:19:54.19:0,54,1712	0/0:29,0:29:87.30:0,87,2745	1/1:0,17:17:48.16:1042,48,0	0/0:25,0:25:75.26:0,75,2367	0/0:40,0:40:99:0,117,3654	0/0:4,0:4:12.04:0,12,272
chr10	74880568	.	T	TAAGGAAGGAAGGAAGG	19551.40	PASS	AB=1.000;AC=35;AF=0.673;AN=52;BaseQRankSum=9.380;DP=706;FS=33.542;HRun=0;HaplotypeScore=301.7162;InbreedingCoeff=0.8541;MQ=68.61;MQ0=5;MQRankSum=-9.841;QD=44.03;ReadPosRankSum=-1.408;VQSLOD=3.0203;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:36.12:1152,36,0	0/0:11,0:11:27.09:0,27,1026	0/0:30,0:23:2.88:0,3,15	./.	0/0:30,0:31:57.18:0,57,2002	0/0:34,0:34:57.20:0,57,1982	0/0:17,0:17:30.10:0,30,953	./.	1/1:17,10:29:21.07:1450,21,0	1/1:37,0:37:56:2128,56,0	1/1:14,0:14:15.03:434,15,0	1/1:28,0:28:42.08:1892,42,0	1/1:20,7:29:18.06:1064,18,0	0/0:28,0:28:45.14:0,45,1536	0/0:33,0:33:54.17:0,54,1920	1/1:31,0:30:56:2089,56,0	0/1:31,0:31:99:160,0,1906	0/0:24,0:24:47.76:0,48,1770	1/1:15,0:15:12.04:395,12,0	1/1:30,0:30:42.59:2076,43,0	1/1:21,0:21:18.05:493,18,0	1/1:23,0:22:12.93:797,13,0	1/1:15,6:21:18.16:1048,18,0	1/1:28,0:28:30.10:1184,30,0	1/1:22,0:22:40.37:1147,40,0	1/1:29,0:29:39.12:1482,39,0	1/1:19,0:20:15.51:409,16,0	1/1:4,0:4:9.03:151,9,0
chr10	74882099	.	TTTA	T	8083.46	PASS	AB=0.980;AC=29;AF=0.518;AN=56;BaseQRankSum=4.491;DP=469;FS=0.740;HRun=0;HaplotypeScore=76.5663;InbreedingCoeff=0.8105;MQ=73.12;MQ0=0;MQRankSum=-2.660;QD=30.28;ReadPosRankSum=1.608;VQSLOD=5.1386;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:42.08:649,42,0	0/0:9,0:9:27.09:0,27,596	0/0:16,0:14:25.40:0,25,380	0/0:11,0:8:9.02:0,9,120	0/0:26,0:26:75.22:0,75,1498	0/0:17,0:17:51.16:0,51,1037	0/0:11,0:11:33.08:0,33,606	0/0:24,0:24:69.22:0,69,1436	1/1:0,11:11:27.09:436,27,0	0/1:23,0:23:43.90:44,0,463	0/0:23,0:23:44.58:0,45,737	1/1:0,21:21:54.14:845,54,0	1/1:0,18:18:45.15:731,45,0	0/0:16,0:16:48.15:0,48,1019	0/0:17,0:17:51.13:0,51,977	0/1:15,1:16:3.70:4,0,401	0/0:14,0:14:42.14:0,42,951	0/0:18,0:18:54.15:0,54,1128	1/1:1,11:12:36.06:488,36,0	1/1:0,29:29:87.07:1241,87,0	1/1:0,13:13:30.06:457,30,0	1/1:0,13:13:30.04:456,30,0	1/1:0,12:12:32.74:474,33,0	1/1:0,19:19:33.03:505,33,0	0/1:15,0:14:6.77:7,0,402	1/1:0,12:12:36.05:529,36,0	1/1:0,25:25:51.17:827,51,0	1/1:1,10:11:26.58:391,27,0
chr10	74882566	.	ATT	A	2970.90	PASS	AB=0.938;AC=15;AF=0.268;AN=56;BaseQRankSum=6.344;DP=500;FS=0.427;HRun=10;HaplotypeScore=80.4147;InbreedingCoeff=0.9033;MQ=79.05;MQ0=1;MQRankSum=1.737;QD=22.68;ReadPosRankSum=1.201;VQSLOD=3.2563;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:36.10:401,36,0	0/0:5,0:5:15.05:0,15,238	0/0:18,0:17:32.80:0,33,425	0/1:14,1:13:27.87:28,0,185	0/0:27,0:27:75.22:0,75,1123	0/0:25,0:25:68.60:0,69,1056	0/0:11,0:11:27.09:0,27,429	0/0:21,0:26:55.61:0,56,718	1/1:0,20:20:54.15:602,54,0	0/0:26,0:26:69.22:0,69,1054	0/0:12,0:12:36.12:0,36,550	1/1:4,20:24:48.11:535,48,0	1/1:0,19:19:54.15:602,54,0	0/0:20,0:20:48.14:0,48,720	0/0:20,0:20:54.16:0,54,815	0/0:21,0:21:54.18:0,54,837	0/0:12,0:13:35.61:0,36,524	0/0:18,0:18:42.14:0,42,662	0/0:3,0:14:31.05:0,31,129	0/0:2,0:18:39.93:0,40,137	0/0:1,0:9:19.96:0,20,69	1/1:1,10:11:27.07:301,27,0	1/1:3,16:19:45.12:502,45,0	1/1:1,8:9:18.05:201,18,0	0/0:21,0:22:60.20:0,60,934	0/0:4,0:22:50.94:0,51,250	0/0:4,0:27:54.90:0,55,189	0/0:5,0:15:24.83:0,25,85
chr10	74884005	.	GA	G	6677.06	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.820;DP=738;FS=5.488;HRun=1;HaplotypeScore=69.4327;InbreedingCoeff=0.9933;MQ=86.43;MQ0=0;MQRankSum=-2.930;QD=38.82;ReadPosRankSum=0.799;VQSLOD=5.4810;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,1976	0/0:8,0:8:24.08:0,24,384	0/0:31,0:31:93.25:0,93,1399	0/0:18,0:18:54.15:0,54,815	0/0:26,0:26:75.26:0,75,1189	0/0:23,0:23:69.24:0,69,1103	0/0:16,0:16:48.16:0,48,767	0/0:44,0:44:99:0,127,1955	0/0:34,0:34:99:0,102,1604	0/0:31,0:31:93.32:0,93,1487	0/0:22,0:22:66.21:0,66,1029	0/0:31,0:31:93.32:0,93,1460	0/0:22,0:22:66.22:0,66,1045	0/0:32,0:32:96.33:0,96,1532	0/0:27,0:27:78.24:0,78,1182	0/0:18,0:18:54.18:0,54,861	0/0:30,0:29:90.28:0,90,1403	0/0:18,0:18:51.17:0,51,805	1/1:0,30:30:90.27:1237,90,0	1/1:0,31:31:90.30:1259,90,0	1/1:0,35:35:93.31:1299,93,0	0/0:17,0:17:51.17:0,51,815	0/0:20,0:20:60.19:0,60,936	0/0:27,0:27:81.28:0,81,1294	0/0:28,0:28:84.29:0,84,1343	1/1:1,36:37:63.34:1415,63,0	1/1:0,35:35:93.31:1299,93,0	1/1:0,4:4:12.04:168,12,0
chr10	74884601	.	C	CA	3741.98	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=9.976;DP=597;FS=6.432;HRun=9;HaplotypeScore=86.6530;InbreedingCoeff=0.9137;MQ=72.30;MQ0=1;MQRankSum=-2.028;QD=16.41;ReadPosRankSum=-2.449;VQSLOD=3.1546;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,12:22:51.06:526,51,0	0/0:16,0:16:47.97:0,48,413	0/0:41,0:24:22.15:0,22,291	0/1:27,0:16:6.23:6,0,87	0/0:23,0:23:56.98:0,57,495	0/0:13,0:13:38.99:0,39,338	0/0:25,1:26:29.79:0,30,484	0/0:27,1:27:23.76:0,24,422	1/1:6,9:15:39.09:420,39,0	1/1:9,0:23:45.74:245,46,0	1/1:10,1:19:37.55:217,38,0	1/1:8,9:18:41.95:443,42,0	1/1:4,8:12:27.06:291,27,0	0/0:14,1:15:2.78:0,3,250	0/0:21,0:21:56.99:0,57,495	1/1:13,1:28:56.17:319,56,0	0/0:36,0:36:65.91:0,66,790	0/0:30,0:30:68.95:0,69,594	0/0:18,0:18:43.27:0,43,387	0/0:22,0:22:56.93:0,57,487	0/0:18,0:18:29.99:0,30,260	1/1:5,9:15:29.85:363,30,0	1/1:3,11:14:27.07:299,27,0	1/1:6,11:16:33.09:365,33,0	1/1:8,0:17:45.78:248,46,0	0/0:29,0:29:65.97:0,66,570	0/0:19,0:19:50.98:0,51,442	0/0:13,0:13:35.97:0,36,307
chr10	74884649	.	CA	C	7605.72	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=10.458;DP=608;FS=0.000;HRun=9;HaplotypeScore=85.1109;InbreedingCoeff=0.9161;MQ=73.34;MQ0=2;MQRankSum=-4.172;QD=20.56;ReadPosRankSum=2.102;VQSLOD=5.3488;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:28:72.01:653,72,0	0/0:21,0:21:60.18:0,60,692	0/1:40,0:26:49.55:50,0,217	0/0:39,0:29:18.87:0,19,416	0/0:23,0:23:54.14:0,54,603	0/0:17,0:17:45.11:0,45,519	0/0:16,0:16:36.11:0,36,415	0/0:30,0:30:69.18:0,69,777	1/1:0,21:21:63.03:576,63,0	1/1:7,14:21:15.64:325,16,0	1/1:2,17:19:51.03:466,51,0	1/1:2,18:20:51.03:467,51,0	1/1:0,18:18:51.03:466,51,0	0/0:17,0:17:42.09:0,42,457	0/0:19,0:19:54.15:0,54,614	1/1:0,20:20:57.03:521,57,0	0/0:27,0:27:78.18:0,78,884	0/0:28,0:29:83.96:0,84,895	1/1:2,27:29:84.01:754,84,0	1/1:2,15:17:42.02:383,42,0	1/1:1,19:20:48.02:439,48,0	1/1:2,11:13:27.01:247,27,0	1/1:4,15:19:33:300,33,0	1/1:1,16:17:41.95:374,42,0	1/1:0,11:11:33.02:302,33,0	1/1:0,21:21:62.99:568,63,0	1/1:3,23:26:66.03:604,66,0	1/1:3,5:8:12:110,12,0
chr10	74885957	.	G	GA	4594.80	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.735;DP=561;FS=9.368;HRun=4;HaplotypeScore=58.2873;InbreedingCoeff=0.9982;MQ=89.63;MQ0=0;MQRankSum=-2.287;QD=34.55;ReadPosRankSum=3.382;VQSLOD=5.1213;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,37:37:99:1394,102,0	0/0:9,0:9:24.05:0,24,263	0/0:25,0:25:66.17:0,66,731	0/0:25,0:25:54.13:0,54,593	0/0:27,0:27:75.20:0,75,841	0/0:15,0:15:42.12:0,42,476	0/0:21,0:21:57.15:0,57,637	0/0:44,0:44:99:0,123,1387	1/1:1,12:13:33.11:451,33,0	0/0:29,0:29:81.23:0,81,919	0/0:17,0:17:51.15:0,51,578	1/1:0,16:16:45.15:615,45,0	1/1:3,11:14:24.08:328,24,0	0/0:16,0:16:45.13:0,45,511	0/0:19,0:19:54.12:0,54,593	0/0:20,0:20:60.17:0,60,681	0/0:20,0:20:51.14:0,51,578	0/0:18,0:18:51.14:0,51,579	0/0:17,0:17:42.10:0,42,466	0/0:24,0:24:66.19:0,66,749	0/0:22,0:22:66.19:0,66,749	1/1:1,12:13:36.12:493,36,0	1/1:1,20:21:54.18:739,54,0	1/1:0,18:18:42.14:575,42,0	0/0:13,0:13:33.09:0,33,374	0/0:19,0:19:48.12:0,48,536	0/0:20,0:20:51.14:0,51,578	0/0:8,0:8:20.33:0,20,236
chr10	74886075	.	CT	C	1047.49	PASS	AB=0.860;AC=16;AF=0.286;AN=56;BaseQRankSum=0.352;DP=531;FS=7.401;HRun=13;HaplotypeScore=71.1342;InbreedingCoeff=0.6522;MQ=66.59;MQ0=13;MQRankSum=0.171;QD=6.47;ReadPosRankSum=1.599;VQSLOD=2.2858;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,16:22:15.80:290,16,0	0/0:11,0:11:14.80:0,15,146	0/1:21,1:11:10.32:10,0,44	0/0:38,0:20:20.11:0,20,115	0/0:25,1:28:23.41:0,23,328	0/1:14,2:17:6.28:6,0,228	0/0:15,0:14:23.99:0,24,223	0/0:26,1:28:44.62:0,45,373	1/1:2,5:7:19.14:134,19,0	0/0:25,0:38:67.56:0,68,340	0/0:10,0:22:34.05:0,34,176	1/1:7,7:14:25.37:179,25,0	1/1:6,7:14:21.35:142,21,0	0/0:9,0:9:11.23:0,11,95	0/0:9,0:10:14.86:0,15,131	0/0:4,0:16:28.83:0,29,172	0/0:30,1:32:43.78:0,44,547	0/0:23,0:20:36.30:0,36,321	0/0:17,1:15:3.45:0,3,146	0/1:25,3:28:5.69:6,0,398	0/0:7,0:6:12.02:0,12,116	1/1:6,4:10:19.15:122,19,0	0/1:6,5:11:8.32:108,0,8	1/1:4,13:17:32.81:240,33,0	0/0:15,0:21:45.80:0,46,258	0/0:13,0:14:27.44:0,27,218	0/0:23,2:24:37.76:0,38,506	0/0:11,0:11:16.12:0,16,117
chr10	74888030	.	A	ACCAAT	24443.45	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-14.859;DP=657;FS=1.657;HRun=0;HaplotypeScore=106.1554;InbreedingCoeff=0.9998;MQ=82.44;MQ0=2;MQRankSum=-6.991;QD=80.67;ReadPosRankSum=2.577;VQSLOD=6.8053;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:25:60.12:1841,60,0	0/0:12,0:12:36.12:0,36,802	0/0:16,0:16:42.13:0,42,880	0/0:25,0:25:72.09:0,72,1303	0/0:31,0:31:90.30:0,90,1946	0/0:27,0:27:81.24:0,81,1718	0/0:14,0:14:39.11:0,39,787	0/0:25,0:25:72.22:0,72,1523	1/1:3,21:27:69.24:2189,69,0	0/0:34,0:34:99:0,99,2000	0/0:24,0:24:72.24:0,72,1566	1/1:2,26:27:75.26:2420,75,0	1/1:4,18:23:66.23:2053,66,0	0/0:20,0:20:60.20:0,60,1298	0/0:32,0:32:96.33:0,96,2141	0/0:27,0:27:81.28:0,81,1790	0/0:18,0:18:54.17:0,54,1160	0/0:23,0:23:69.16:0,69,1436	1/1:6,11:16:48.16:1474,48,0	1/1:4,28:34:96.33:2927,96,0	1/1:3,18:21:54.19:1680,54,0	1/1:0,17:19:48.16:1525,48,0	1/1:1,14:18:39.61:1235,40,0	1/1:3,11:15:36.12:1034,36,0	0/0:26,0:26:75.20:0,75,1655	1/1:2,28:31:26.41:2756,26,0	1/1:4,22:26:69.17:2148,69,0	1/1:0,12:12:36.12:1161,36,0
chr10	74888224	.	G	GA	12593.10	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-13.037;DP=661;FS=4.797;HRun=7;HaplotypeScore=58.2203;InbreedingCoeff=0.9986;MQ=77.05;MQ0=0;MQRankSum=-4.620;QD=30.13;ReadPosRankSum=4.929;VQSLOD=5.1202;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:42.13:507,42,0	0/0:9,0:9:18.02:0,18,174	0/0:25,0:25:60.07:0,60,569	0/0:17,0:17:40.30:0,40,376	0/0:36,0:36:99:0,99,955	0/0:26,0:26:66.10:0,66,637	0/0:16,0:16:45.07:0,45,435	0/0:39,0:39:96.14:0,96,925	1/1:4,16:20:48.15:580,48,0	1/1:4,31:35:93.27:1110,93,0	1/1:5,24:29:69.08:775,69,0	1/1:0,24:24:66.20:797,66,0	1/1:1,19:20:48.15:580,48,0	0/0:14,0:14:36.06:0,36,347	0/0:28,0:28:69.11:0,69,666	1/1:4,19:23:51.16:616,51,0	0/0:22,0:22:57.07:0,57,544	0/0:11,0:11:27.04:0,27,260	1/1:5,29:34:87.26:1035,87,0	1/1:5,35:40:99:1247,108,0	1/1:2,14:16:39.12:471,39,0	1/1:4,19:23:54.17:652,54,0	1/1:2,15:17:45.14:539,45,0	1/1:1,16:17:42.13:507,42,0	1/1:1,26:27:72.22:870,72,0	1/1:0,26:26:75.22:893,75,0	1/1:6,32:38:81.25:978,81,0	1/1:0,13:13:36.11:435,36,0
chr10	74890416	.	C	CCTCT	2794.35	PASS	AB=1.000;AC=20;AF=0.400;AN=50;BaseQRankSum=-3.276;DP=306;FS=14.378;HRun=0;HaplotypeScore=51.2620;InbreedingCoeff=0.7746;MQ=67.56;MQ0=12;MQRankSum=-2.494;QD=24.30;ReadPosRankSum=2.260;VQSLOD=1.9940;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:18:18.02:406,18,0	0/0:3,0:3:9.03:0,9,186	0/0:46,0:28:46.50:0,47,707	0/0:41,0:22:34.56:0,35,686	0/0:6,0:6:18.03:0,18,299	0/0:9,0:9:24.04:0,24,445	0/0:17,0:15:42.04:0,42,655	0/1:11,0:10:2.96:3,0,288	1/1:1,13:14:18.06:517,18,0	0/0:7,0:7:21.05:0,21,395	0/0:6,0:6:15.03:0,15,224	1/1:0,8:9:15.05:433,15,0	1/1:2,8:11:21:529,21,0	0/0:13,0:13:36.01:0,36,551	0/0:7,0:7:21.05:0,21,320	0/0:10,0:10:26.87:0,27,466	0/0:6,0:6:9.03:0,9,188	0/0:3,0:3:9.03:0,9,152	./.	./.	1/1:6,0:4:0.47:1,0,0	1/1:9,4:13:21.46:441,21,0	1/1:6,3:9:12.90:226,13,0	1/1:0,11:11:12.51:346,13,0	0/0:14,0:12:35.95:0,36,520	0/1:7,0:6:15.42:16,0,15	1/1:5,0:4:8.92:64,9,0	./.
chr10	74890428	.	TCACACACACACACACA	T	252.79	PASS	AC=6;AF=0.150;AN=40;BaseQRankSum=2.687;DP=339;FS=4.462;HRun=0;HaplotypeScore=105.5474;InbreedingCoeff=0.4580;MQ=57.12;MQ0=36;MQRankSum=-2.687;QD=9.36;ReadPosRankSum=0.056;VQSLOD=1.9277;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:3,0:3:3.01:0,3,74	./.	./.	0/0:6,0:6:12.04:0,12,508	0/0:9,0:9:9.03:0,9,524	0/0:26,0:22:18.98:0,19,572	0/0:9,0:8:3:0,3,29	./.	0/0:11,0:9:15.05:0,15,590	0/0:7,0:7:9.03:0,9,408	./.	1/1:8,1:9:3.01:130,3,0	0/0:16,0:16:24.08:0,24,1230	0/0:13,0:10:21.05:0,21,1145	0/0:11,0:10:9.03:0,9,235	0/0:11,0:8:6.02:0,6,412	0/0:8,0:4:3.01:0,3,203	0/0:3,0:2:0.47:0,0,1	0/0:4,0:4:0:0,0,0	0/0:7,0:4:0.47:0,0,1	1/1:11,1:12:3.01:110,3,0	./.	./.	0/0:11,0:9:12.04:0,12,515	0/0:7,0:4:3.01:0,3,100	1/1:6,0:4:3.01:112,3,0	./.
chr10	74891585	.	A	AC	10471.86	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=18.461;DP=605;FS=13.495;HRun=0;HaplotypeScore=111.7668;InbreedingCoeff=0.9850;MQ=89.47;MQ0=0;MQRankSum=-6.545;QD=29.17;ReadPosRankSum=3.743;VQSLOD=3.9121;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,35:36:99:1078,105,0	0/0:11,0:11:33.09:0,33,443	0/0:23,0:23:63.21:0,63,880	0/0:28,0:28:80.02:0,80,1054	0/0:23,0:23:66.21:0,66,906	0/0:20,0:20:57.19:0,57,795	0/0:18,0:18:51.17:0,51,713	0/0:22,0:22:66.20:0,66,880	1/1:0,19:19:56.68:547,57,0	1/1:1,17:19:54.07:566,54,0	1/1:3,21:24:68.97:681,69,0	1/1:4,17:21:63:635,63,0	1/1:2,26:28:84.06:849,84,0	0/0:29,0:29:87.28:0,87,1200	0/0:23,0:23:63.21:0,63,881	1/1:1,20:21:63.12:662,63,0	0/0:35,0:35:99:0,105,1451	0/0:14,0:14:42.14:0,42,587	1/1:2,10:12:33.04:329,33,0	1/1:1,20:21:63.11:632,63,0	1/1:2,21:23:66.07:653,66,0	1/1:3,26:29:84.10:837,84,0	1/1:2,13:15:41.92:402,42,0	1/1:0,18:18:48.08:497,48,0	1/1:0,25:25:75.13:763,75,0	1/1:2,21:23:60.05:628,60,0	1/1:4,19:23:65.96:655,66,0	1/1:0,2:2:6.01:57,6,0
chr10	74891586	.	G	GT	10737.10	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=17.871;DP=612;FS=10.017;HRun=0;HaplotypeScore=113.8110;InbreedingCoeff=0.9850;MQ=88.88;MQ0=0;MQRankSum=-7.333;QD=29.02;ReadPosRankSum=3.994;VQSLOD=4.0512;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,35:38:99:1053,105,0	0/0:11,0:11:30.10:0,30,419	0/0:23,0:23:63.20:0,63,862	0/0:28,0:28:80.61:0,81,1055	0/0:22,0:22:66.21:0,66,906	0/0:20,0:20:60.17:0,60,798	0/0:18,0:18:54.16:0,54,737	0/0:20,0:20:60.20:0,60,838	1/1:0,19:19:57.03:557,57,0	1/1:2,17:19:57.10:616,57,0	1/1:7,21:28:64.35:661,64,0	1/1:4,17:21:51.70:597,52,0	1/1:2,26:28:84.16:880,84,0	0/0:28,0:28:84.28:0,84,1175	0/0:23,0:23:66.20:0,66,905	1/1:0,20:20:60.13:640,60,0	0/0:35,0:35:99:0,105,1467	0/0:14,0:14:42.14:0,42,587	1/1:5,10:15:42.07:419,42,0	1/1:0,20:20:60.11:610,60,0	1/1:2,21:23:66.03:643,66,0	1/1:3,26:29:82.40:838,82,0	1/1:2,13:15:45.05:453,45,0	1/1:0,18:18:48.09:499,48,0	1/1:1,25:26:75.14:764,75,0	1/1:4,21:25:69.09:720,69,0	1/1:5,19:24:69.14:730,69,0	1/1:0,2:2:6.01:57,6,0
chr10	74891846	.	C	CAAACAAACAAACAAACAAACA	15266.65	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=5.506;DP=623;FS=11.703;HRun=0;HaplotypeScore=256.1622;InbreedingCoeff=0.8991;MQ=67.97;MQ0=6;MQRankSum=-6.445;QD=43.13;ReadPosRankSum=1.419;VQSLOD=2.4610;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:30:6.02:577,6,0	0/0:9,0:9:24.06:0,24,894	0/0:53,0:27:32.79:0,33,622	0/0:34,0:24:9.62:0,10,351	0/0:22,0:23:66.11:0,66,2224	0/0:25,0:26:75.19:0,75,2835	0/0:15,0:15:42.14:0,42,1932	0/0:34,0:34:75.65:0,76,2163	1/1:5,0:13:33.11:1611,33,0	1/1:2,0:22:26.51:854,27,0	1/1:3,0:22:49.12:647,49,0	1/1:2,4:15:3.01:297,3,0	1/1:1,3:21:3.48:298,3,0	0/0:13,0:13:36.08:0,36,1327	0/0:18,0:18:54.13:0,54,2061	1/1:1,0:22:33.04:469,33,0	0/0:17,0:19:46.47:0,46,1096	0/0:23,0:23:26.52:0,27,2392	1/1:2,0:20:54.15:1467,54,0	1/1:7,0:30:28.73:444,29,0	1/1:3,0:13:3.01:118,3,0	1/1:0,5:14:17.86:684,18,0	1/1:9,0:21:54.15:2519,54,0	1/1:5,0:12:30.10:1346,30,0	1/1:1,0:23:21.07:323,21,0	1/1:2,0:29:73.09:2007,73,0	1/1:1,0:34:32.60:1133,33,0	1/1:0,0:13:12.04:472,12,0
chr10	74891939	.	CACAT	C	9972.78	PASS	AB=0.525;AC=25;AF=0.446;AN=56;BaseQRankSum=11.149;DP=618;FS=1.876;HRun=0;HaplotypeScore=116.9147;InbreedingCoeff=0.9231;MQ=60.59;MQ0=4;MQRankSum=-5.151;QD=37.07;ReadPosRankSum=3.545;VQSLOD=5.3026;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,9:28:53.34:819,53,0	0/0:9,0:9:21.07:0,21,515	0/0:16,0:14:25.33:0,25,507	0/0:16,0:8:14.93:0,15,251	0/0:32,0:32:90.31:0,90,2186	0/0:27,0:27:78.21:0,78,1691	0/0:12,0:12:24.08:0,24,498	0/0:43,0:42:99:0,120,2588	1/1:9,9:18:48.16:793,48,0	0/0:31,0:31:78.26:0,78,1921	0/0:28,0:28:72.07:0,72,1466	1/1:11,8:19:45.11:717,45,0	1/1:8,9:17:42.14:734,42,0	0/0:17,0:17:48.15:0,48,1076	0/0:25,0:25:66.21:0,66,1389	0/0:13,0:13:27.08:0,27,617	0/0:27,0:26:57.20:0,57,1332	0/0:26,0:26:71.36:0,71,1561	1/1:14,0:14:24.08:373,24,0	1/1:12,14:26:63.16:1004,63,0	1/1:2,24:26:54.11:861,54,0	1/1:6,10:16:39.10:645,39,0	1/1:8,4:12:24.08:417,24,0	1/1:8,7:15:21.05:340,21,0	0/0:27,0:27:72.20:0,72,1543	0/1:3,28:31:99:1241,0,101	1/1:17,19:36:93.29:1518,93,0	1/1:7,4:11:30.10:510,30,0
chr10	74891980	.	ACATACATACAAT	A	1366.32	PASS	AB=0.916;AC=8;AF=0.143;AN=56;BaseQRankSum=6.587;DP=656;FS=9.246;HRun=0;HaplotypeScore=240.6247;InbreedingCoeff=-0.1278;MQ=47.56;MQ0=28;MQRankSum=-6.769;QD=9.49;ReadPosRankSum=-3.043;VQSLOD=0.7518;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:32:10.30:10,0,653	0/0:8,0:8:24.08:0,24,964	0/0:75,0:16:43.54:0,44,622	0/0:46,0:12:28.25:0,28,482	0/0:24,0:24:66.23:0,66,2460	0/0:21,0:21:51.17:0,51,1809	0/0:20,0:20:44.90:0,45,1476	0/0:40,0:38:84.74:0,85,1598	0/1:11,10:21:99:331,0,239	0/0:25,0:25:66.20:0,66,1423	0/0:24,0:24:39.06:0,39,669	0/1:17,2:19:99:461,0,271	0/1:20,2:22:99:524,0,369	0/0:20,0:20:60.20:0,60,2536	0/0:21,0:21:60.19:0,60,2141	0/0:28,0:28:63.18:0,63,1096	0/0:29,0:28:67.28:0,67,2575	0/0:27,0:27:45.26:0,45,1841	0/0:6,0:2:1.82:0,2,5	0/0:19,0:19:16.04:0,16,515	0/0:22,0:22:39.34:0,39,543	0/1:11,0:11:1.04:1,0,385	0/1:5,1:6:33.98:128,0,34	0/0:11,0:11:17.65:0,18,500	0/0:21,0:21:51.15:0,51,1051	0/0:24,0:24:8.26:0,8,614	0/1:27,0:27:8.73:9,0,476	0/1:6,0:6:28.93:29,0,60
chr10	74891992	.	TCATA	T	2781.93	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=8.969;DP=638;FS=23.303;HRun=0;HaplotypeScore=149.1943;InbreedingCoeff=0.7493;MQ=50.25;MQ0=27;MQRankSum=-6.913;QD=11.26;ReadPosRankSum=1.389;VQSLOD=1.5288;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:31:39.93:0,40,603	0/0:8,0:8:18.06:0,18,422	0/0:83,0:20:4.88:0,5,121	0/0:43,0:13:15.05:0,15,358	0/0:20,0:20:36.12:0,36,805	0/0:18,0:18:30.10:0,30,720	0/0:25,0:25:42.14:0,42,992	0/0:33,0:33:36.58:0,37,814	1/1:19,0:19:9.14:33,9,0	1/1:13,11:24:30.10:478,30,0	1/1:9,13:22:30.10:443,30,0	0/1:15,0:17:5.51:6,0,109	0/1:17,0:21:2.91:3,0,134	0/0:21,0:21:51.18:0,51,1207	0/0:29,0:29:66.23:0,66,1542	1/1:5,23:28:48.16:768,48,0	0/0:28,0:27:60.18:0,60,1332	0/0:28,0:28:52.35:0,52,1163	1/1:3,0:3:5.04:34,5,0	1/1:10,0:17:21.01:190,21,0	1/1:19,0:20:2.92:23,3,0	0/0:10,0:11:3.01:0,3,30	1/1:5,0:5:2.03:7,2,0	0/0:10,0:11:7.84:0,8,112	1/1:8,10:18:29.28:466,29,0	1/1:11,0:17:18.01:165,18,0	1/1:16,0:27:27.33:317,27,0	1/1:4,0:6:6.01:55,6,0
chr10	74892293	.	GCGCACACACACACACACACA	G	2853.42	PASS	AB=0.986;AC=16;AF=0.286;AN=56;BaseQRankSum=2.706;DP=429;FS=3.650;HRun=0;HaplotypeScore=227.9850;InbreedingCoeff=0.4495;MQ=58.03;MQ0=19;MQRankSum=-2.116;QD=17.51;ReadPosRankSum=0.946;VQSLOD=2.6540;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:15.38:0,15,520	0/0:8,0:8:20.96:0,21,541	0/1:10,0:3:3.19:3,0,23	0/0:10,0:5:10.10:0,10,62	0/0:17,0:16:36.04:0,36,1139	0/0:13,0:12:5.13:0,5,1140	0/0:22,0:19:35.94:0,36,1217	0/0:19,0:17:46.30:0,46,557	0/0:8,0:8:17.89:0,18,261	0/1:21,0:21:73.07:73,0,353	0/1:14,0:14:54.95:111,0,55	0/0:11,0:11:21:0,21,369	0/0:20,0:19:44.57:0,45,697	0/0:17,0:16:44.82:0,45,2171	0/0:14,0:14:36.06:0,36,2245	0/1:11,0:10:6.93:612,0,7	0/0:31,0:31:89.74:0,90,5008	0/0:15,0:13:38.88:0,39,1827	1/1:10,0:10:10.36:168,10,0	1/1:1,14:15:6.02:218,6,0	1/1:20,0:18:18.56:132,19,0	0/0:12,0:11:17.80:0,18,422	0/0:13,0:12:17.92:0,18,337	0/0:13,0:11:17.92:0,18,237	0/1:19,0:19:66.86:834,0,67	1/1:21,0:21:8.75:326,9,0	1/1:16,0:16:12.88:390,13,0	0/1:5,0:3:8.44:161,0,8
chr10	74892295	.	GCACA	G	987.93	PASS	AB=0.976;AC=33;AF=0.688;AN=48;BaseQRankSum=6.184;DP=454;FS=0.861;HRun=0;HaplotypeScore=135.6249;InbreedingCoeff=0.3471;MQ=56.80;MQ0=25;MQRankSum=-5.850;QD=3.03;ReadPosRankSum=2.756;VQSLOD=2.1046;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:0:0,0,0	0/0:7,0:7:2.92:0,3,17	./.	./.	0/0:16,0:15:6.02:0,6,133	0/1:13,0:12:32.40:32,0,134	0/0:18,3:18:11.61:0,12,118	./.	1/1:9,0:9:5.84:42,6,0	1/1:24,0:24:3:28,3,0	1/1:18,0:17:3:28,3,0	1/1:12,0:12:6.45:50,6,0	1/1:19,0:18:18.46:160,18,0	0/0:16,2:16:15.12:0,15,343	0/0:13,0:15:26.81:0,27,481	1/1:15,0:14:15.02:140,15,0	0/1:34,0:33:68.70:69,0,657	0/1:13,1:13:4.48:191,0,4	./.	1/1:15,0:15:3:28,3,0	1/1:22,0:19:0.47:1,0,0	1/1:14,0:12:3:28,3,0	1/1:13,0:12:3:28,3,0	1/1:15,0:13:6.01:56,6,0	1/1:23,0:24:21.02:195,21,0	0/1:21,0:21:0:0,0,0	1/1:15,0:15:2.87:27,3,0	1/1:5,0:3:3:28,3,0
chr10	74892317	.	ACACACACACACACACACACACACACACACACT	A	4702.05	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=7.213;DP=512;FS=8.040;HRun=0;HaplotypeScore=304.6417;InbreedingCoeff=0.4769;MQ=47.94;MQ0=47;MQRankSum=-0.821;QD=30.73;ReadPosRankSum=1.000;VQSLOD=2.1851;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:18.85:0,19,998	0/0:5,0:4:12.04:0,12,665	0/0:6,0:1:3.01:0,3,200	0/0:14,0:1:0:0,0,0	0/0:18,0:16:33.11:0,33,2603	0/0:14,0:13:32.47:0,32,2696	0/0:27,0:23:41.28:0,41,3375	0/0:21,0:17:48.16:0,48,2589	0/0:12,0:10:18.05:0,18,862	1/1:5,25:28:62.46:1362,62,0	1/1:2,20:21:3.01:254,3,0	0/0:14,0:14:14.48:0,14,664	0/0:22,0:20:35.47:0,35,1474	0/0:17,0:15:42.14:0,42,3811	0/0:20,0:19:41.26:0,41,4582	1/1:4,15:18:16.41:1171,16,0	0/0:36,0:35:98.64:0,99,9512	0/0:22,0:19:54.15:0,54,4269	0/0:10,0:9:25.33:0,25,640	0/1:17,0:17:48.27:48,0,49	0/0:25,0:20:21:0,21,565	0/0:17,0:14:11.87:0,12,558	0/0:14,0:13:11.71:0,12,524	0/0:16,0:13:12.04:0,12,525	1/1:3,19:22:21.07:1765,21,0	0/1:22,0:21:11.62:12,0,974	0/1:15,0:14:46.62:47,0,505	0/1:6,0:4:42.72:43,0,160
chr10	74892327	.	ACACACACACACACACACACACTCT	A	4172.44	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=7.603;DP=537;FS=0.000;HRun=0;HaplotypeScore=258.6198;InbreedingCoeff=0.7339;MQ=47.78;MQ0=47;MQRankSum=-0.480;QD=22.55;ReadPosRankSum=0.944;VQSLOD=1.7024;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:15.45:0,15,491	0/0:7,0:6:18.04:0,18,405	0/0:13,0:4:12.04:0,12,275	0/0:21,0:4:11.87:0,12,173	0/0:20,0:18:39.10:0,39,1772	0/0:15,0:14:34.66:0,35,1849	0/0:27,0:23:40.94:0,41,2058	0/0:20,0:17:49.98:0,50,1465	0/0:10,0:8:12.04:0,12,393	0/1:28,0:26:78.01:170,0,78	1/1:22,0:21:3.01:160,3,0	0/0:16,0:16:13.40:0,13,332	0/0:20,0:18:26.31:0,26,665	0/0:17,0:15:42.12:0,42,2268	0/0:21,0:20:41.03:0,41,3115	1/1:19,0:18:15.99:797,16,0	0/0:37,0:36:97.83:0,98,6538	0/0:27,0:24:72.24:0,72,2851	1/1:10,0:9:8.85:197,9,0	1/1:20,0:20:12.26:301,12,0	1/1:22,0:17:11.03:98,11,0	0/0:19,0:16:11.83:0,12,243	0/0:15,0:14:8.83:0,9,211	0/0:16,0:13:6.02:0,6,222	1/1:22,0:22:21.07:1102,21,0	1/1:5,15:19:39.12:614,39,0	1/1:16,0:15:28.30:511,28,0	0/1:6,0:4:24.73:224,0,25
chr10	74892337	.	ACACACACACACT	A	3066.15	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=11.280;DP=548;FS=0.000;HRun=0;HaplotypeScore=186.9745;InbreedingCoeff=0.5966;MQ=50.70;MQ0=46;MQRankSum=-4.355;QD=11.23;ReadPosRankSum=2.849;VQSLOD=2.2005;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:8.06:0,8,81	0/0:5,0:4:11.95:0,12,182	0/0:25,0:7:20.99:0,21,190	0/0:27,0:10:17.19:0,17,205	0/0:15,0:13:27.01:0,27,847	0/0:18,0:17:42.50:0,43,933	0/0:28,0:24:44.51:0,45,911	0/0:20,0:18:53.74:0,54,504	0/1:11,0:9:9.96:116,0,10	1/1:27,0:25:26.31:264,26,0	1/1:21,0:20:3.01:94,3,0	1/1:15,2:17:7.25:182,7,0	1/1:17,2:17:20.61:443,21,0	0/0:17,0:15:39.06:0,39,1259	0/0:23,0:22:47.93:0,48,1730	1/1:18,0:18:15.99:469,16,0	0/0:41,0:40:99:0,115,3541	0/0:26,0:24:71.86:0,72,1161	0/1:9,0:8:8.62:56,0,9	1/1:22,0:22:15.90:180,16,0	1/1:21,0:16:14.59:116,15,0	1/1:16,1:14:2.89:61,3,0	1/1:13,0:12:3.01:53,3,0	1/1:16,0:13:6.02:112,6,0	1/1:21,0:21:20.83:639,21,0	0/1:19,0:18:27.48:153,0,27	0/1:14,0:13:40.34:171,0,40	1/1:8,0:7:7.19:162,7,0
chr10	74892339	.	ACACACACACT	A	3518.56	PASS	AB=0.912;AC=30;AF=0.536;AN=56;BaseQRankSum=11.297;DP=548;FS=1.064;HRun=0;HaplotypeScore=173.4039;InbreedingCoeff=0.6014;MQ=50.99;MQ0=45;MQRankSum=-4.570;QD=11.69;ReadPosRankSum=2.665;VQSLOD=2.8088;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:29:14.39:14,0,27	0/0:4,0:3:8.98:0,9,137	0/0:27,0:9:27:0,27,251	0/0:28,0:11:20.19:0,20,233	0/0:14,0:12:24.02:0,24,714	0/0:17,0:17:42.46:0,42,773	0/0:28,0:24:44.74:0,45,759	0/0:22,0:20:52.99:0,53,451	0/1:5,6:9:10:187,0,10	1/1:27,0:25:26.31:250,26,0	1/1:21,0:20:3.01:80,3,0	1/1:4,13:17:7.89:233,8,0	1/1:6,13:17:20.75:558,21,0	0/0:17,0:15:39.04:0,39,1048	0/0:23,0:22:47.78:0,48,1465	1/1:18,0:18:15.52:399,16,0	0/0:41,0:40:99:0,115,2930	0/0:26,0:24:65.34:0,65,820	1/1:9,0:8:14.26:115,14,0	1/1:22,0:22:15.90:166,16,0	1/1:21,0:16:14.61:116,15,0	1/1:5,13:15:2.98:100,3,0	1/1:2,11:12:3.01:97,3,0	1/1:4,12:13:6.02:200,6,0	1/1:21,0:21:21.07:542,21,0	0/1:19,0:18:23.63:153,0,24	0/1:12,0:11:13.87:160,0,14	1/1:7,0:6:7.87:148,8,0
chr10	74892341	.	ACACACACT	A	2701.73	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=11.802;DP=538;FS=2.354;HRun=0;HaplotypeScore=158.8834;InbreedingCoeff=0.6461;MQ=52.72;MQ0=44;MQRankSum=-3.995;QD=9.32;ReadPosRankSum=1.795;VQSLOD=2.8462;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,20:27:2.61:0,3,13	0/0:4,0:3:8.98:0,9,112	0/0:30,0:11:26.18:0,26,278	0/0:29,0:12:23.20:0,23,270	0/0:14,0:12:24.02:0,24,607	0/0:15,0:15:18.33:0,18,599	0/0:27,0:23:41.35:0,41,587	0/0:19,0:17:44.87:0,45,391	0/1:11,0:9:12.08:107,0,12	1/1:27,0:25:26.26:236,26,0	1/1:21,0:20:3.01:66,3,0	1/1:16,0:16:8.13:155,8,0	1/1:17,0:15:20.73:395,21,0	0/0:17,0:15:35.85:0,36,804	0/0:23,0:22:44.66:0,45,1168	1/1:18,0:18:15.05:329,15,0	0/0:42,0:41:99:0,118,2351	0/1:25,0:23:11.73:12,0,513	1/1:10,0:9:20.32:162,20,0	1/1:22,0:22:15.90:151,16,0	1/1:21,0:16:14.85:116,15,0	1/1:18,0:15:2.57:68,3,0	1/1:12,0:11:3.01:65,3,0	1/1:14,0:12:6.02:136,6,0	1/1:21,0:21:21.07:444,21,0	1/1:19,0:18:25.71:187,26,0	0/1:11,0:10:2.05:146,0,2	1/1:7,0:6:0.32:127,0,0
chr10	74892347	.	ACTCT	A	2132.41	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=9.922;DP=525;FS=2.392;HRun=0;HaplotypeScore=133.9127;InbreedingCoeff=0.7203;MQ=54.08;MQ0=42;MQRankSum=-4.576;QD=8.20;ReadPosRankSum=3.385;VQSLOD=2.5569;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:3.01:0,3,38	0/0:6,0:5:15.04:0,15,219	0/0:35,0:16:48.12:0,48,934	0/0:32,0:15:41.89:0,42,716	0/0:12,0:10:24.08:0,24,508	0/0:15,0:15:39.12:0,39,686	0/0:26,0:23:41.60:0,42,661	0/0:20,0:18:48.11:0,48,824	0/1:11,0:9:16.05:16,0,40	0/1:27,0:25:17.05:17,0,36	1/1:21,0:20:2.97:20,3,0	1/1:16,0:16:5.81:36,6,0	1/1:17,0:15:15.26:106,15,0	0/0:13,0:11:21.07:0,21,412	0/0:20,0:20:42.11:0,42,753	1/1:18,0:18:14.21:96,14,0	0/0:40,0:39:98.29:0,98,1795	0/0:23,0:21:44.76:0,45,740	1/1:2,8:9:23.97:347,24,0	1/1:20,0:20:16.86:224,17,0	1/1:21,0:16:20.75:332,21,0	1/1:18,0:15:2.78:22,3,0	1/1:11,0:11:2.71:19,3,0	1/1:14,0:12:5.97:45,6,0	1/1:21,0:21:19.61:125,20,0	1/1:16,0:15:28.81:404,29,0	1/1:12,0:11:21.07:310,21,0	1/1:7,0:6:15.05:222,15,0
chr10	74892825	.	GA	G	4432.27	PASS	AB=0.823;AC=27;AF=0.482;AN=56;BaseQRankSum=9.535;DP=548;FS=5.085;HRun=11;HaplotypeScore=59.8643;InbreedingCoeff=0.7798;MQ=57.06;MQ0=6;MQRankSum=1.290;QD=14.58;ReadPosRankSum=4.153;VQSLOD=5.3806;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:35:83.40:688,83,0	0/0:7,0:7:15.02:0,15,152	0/1:4,0:4:15.56:16,0,51	0/0:12,1:12:13.56:0,14,258	0/0:18,0:20:44.94:0,45,456	0/1:22,3:25:13.78:14,0,476	0/0:21,0:19:42.11:0,42,448	0/0:20,0:19:20.50:0,20,423	1/1:4,11:15:26.96:222,27,0	0/0:20,0:20:27.07:0,27,288	0/0:22,2:24:32.47:0,32,524	1/1:1,13:14:35.95:295,36,0	1/1:4,19:23:25.51:403,26,0	0/0:13,0:13:30.06:0,30,311	0/0:18,1:19:36.53:0,37,365	0/0:14,0:16:38.93:0,39,398	0/0:34,1:35:71.41:0,71,923	0/0:20,0:21:56.93:0,57,575	1/1:4,17:21:44.85:365,45,0	1/1:3,19:22:47.92:394,48,0	0/1:5,14:19:28.22:210,0,28	1/1:4,15:20:37.97:301,38,0	1/1:4,12:16:29.96:246,30,0	1/1:6,15:21:12.66:312,13,0	0/0:13,0:12:27.07:0,27,286	1/1:9,18:27:44.90:369,45,0	1/1:10,20:30:47.86:387,48,0	1/1:1,9:12:28.04:209,28,0
chr10	74894034	.	C	CTTGT	8061.72	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=1.198;DP=608;FS=3.556;HRun=0;HaplotypeScore=110.5223;InbreedingCoeff=0.9602;MQ=83.66;MQ0=0;MQRankSum=-3.371;QD=51.68;ReadPosRankSum=1.232;VQSLOD=5.4962;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,37:47:99:2461,102,0	0/0:2,0:2:6.02:0,6,102	0/0:31,0:31:55.76:0,56,891	0/0:25,0:25:42.14:0,42,677	0/0:18,0:18:48.13:0,48,764	0/0:23,0:23:60.21:0,60,1018	0/0:18,0:18:42.14:0,42,717	0/0:37,0:37:63.22:0,63,1073	1/1:5,12:18:36.12:901,36,0	0/0:25,0:25:66.16:0,66,1066	0/0:13,0:13:36.12:0,36,607	1/1:5,13:18:37.68:888,38,0	1/1:2,11:14:33.11:826,33,0	0/0:13,0:13:36.12:0,36,614	0/0:22,0:22:57.18:0,57,946	0/0:20,0:20:51.16:0,51,844	0/0:32,0:32:84.29:0,84,1433	0/0:13,0:13:9.44:0,9,439	0/0:28,0:27:63.18:0,63,1000	0/0:15,0:15:27.09:0,27,461	0/0:58,0:58:99:0,150,2490	1/1:4,9:13:33.11:751,33,0	1/1:5,7:12:21.07:526,21,0	1/1:4,27:34:69.24:1708,69,0	0/0:15,0:15:45.15:0,45,768	0/0:22,0:22:57.19:0,57,930	0/0:18,0:17:42.08:0,42,653	0/0:4,0:4:9:0,9,100
chr10	74894455	.	CAGA	C	4515.93	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.974;DP=435;FS=3.877;HRun=0;HaplotypeScore=59.8711;InbreedingCoeff=0.9499;MQ=69.04;MQ0=0;MQRankSum=-1.559;QD=40.32;ReadPosRankSum=1.606;VQSLOD=5.7736;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:24.08:0,24,532	0/0:9,0:9:27.09:0,27,598	0/0:7,0:7:18.05:0,18,328	0/0:4,0:4:9.01:0,9,144	0/0:34,0:34:99:0,99,2081	0/0:20,0:20:54.17:0,54,1131	0/0:5,0:5:15.05:0,15,333	0/0:31,0:31:87.29:0,87,1842	0/0:13,0:13:36.12:0,36,782	0/0:18,0:18:54.19:0,54,1197	0/0:17,0:17:48.16:0,48,1043	0/0:10,0:10:27.09:0,27,578	0/0:7,0:7:18.06:0,18,399	0/0:11,0:11:30.10:0,30,629	0/0:19,0:19:51.17:0,51,1070	0/0:21,0:21:54.17:0,54,1156	0/0:18,0:18:54.19:0,54,1196	0/0:26,0:25:72.25:0,72,1587	1/1:1,16:17:48.14:738,48,0	1/1:0,28:28:81.11:1206,81,0	1/1:0,3:3:6.02:98,6,0	0/0:6,0:6:12.04:0,12,266	0/0:18,0:18:39.12:0,39,822	0/0:7,0:7:15.05:0,15,333	0/0:11,0:11:27.08:0,27,558	1/1:1,20:21:60.20:955,60,0	1/1:1,27:28:63.22:1029,63,0	1/1:0,15:15:30.10:490,30,0
chr10	74895267	.	T	TG	1094.13	PASS	AB=0.792;AC=12;AF=0.214;AN=56;BaseQRankSum=-0.141;DP=334;FS=3.821;HRun=2;HaplotypeScore=57.4933;InbreedingCoeff=0.7652;MQ=65.68;MQ0=3;MQRankSum=0.456;QD=11.76;ReadPosRankSum=-0.863;VQSLOD=1.7558;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:34.62:0,35,346	0/0:2,0:2:5.97:0,6,50	0/0:25,0:6:14.44:0,14,90	0/1:17,0:8:11.67:12,0,12	0/0:20,0:20:43.91:0,44,353	0/0:10,0:10:26.78:0,27,197	0/0:14,0:14:35.34:0,35,286	0/0:25,0:25:53.57:0,54,478	0/0:5,0:5:11.94:0,12,95	0/0:19,0:19:32.34:0,32,262	0/0:11,0:11:20.80:0,21,116	0/0:5,0:5:5.58:0,6,65	0/0:7,0:7:14.90:0,15,115	0/0:6,0:6:11.99:0,12,105	0/0:11,0:10:26.97:0,27,227	0/0:6,0:6:11.58:0,12,86	0/0:15,0:15:31.37:0,31,232	0/0:14,0:14:36.80:0,37,297	1/1:11,0:11:32.95:288,33,0	1/1:13,0:13:17.58:187,18,0	0/1:2,5:6:0:0,0,0	0/0:6,0:6:11.95:0,12,100	0/0:5,0:4:6.41:0,6,46	0/0:6,0:6:11.96:0,12,97	0/0:9,0:9:10.61:0,11,47	1/1:17,1:18:14.47:331,14,0	1/1:12,1:13:29.99:288,30,0	1/1:14,0:14:20.79:159,21,0
chr10	74895784	.	CTTTG	C	720.18	PASS	AB=0.580;AC=1;AF=0.018;AN=56;BaseQRankSum=5.982;DP=568;FS=1.949;HRun=0;HaplotypeScore=92.0835;InbreedingCoeff=0.5615;MQ=67.16;MQ0=1;MQRankSum=0.199;QD=24.83;ReadPosRankSum=1.758;VQSLOD=3.3533;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,21:29:0.50:795,0,0	0/0:6,0:6:12.04:0,12,295	0/0:24,0:24:39.09:0,39,785	0/0:22,0:21:13:0,13,608	0/0:22,0:22:42.13:0,42,983	0/0:20,0:20:45.15:0,45,1106	0/0:12,0:12:24.08:0,24,571	0/0:29,0:29:48.16:0,48,1092	0/0:18,0:18:45.15:0,45,1083	0/0:21,0:21:57.19:0,57,1326	0/0:32,0:32:72.24:0,72,1715	0/0:21,0:21:51.18:0,51,1242	0/0:17,0:17:42.14:0,42,1024	0/0:19,0:19:42.14:0,42,999	0/0:25,0:25:69.24:0,69,1659	0/0:18,0:18:45.15:0,45,1107	0/0:30,0:30:69.24:0,69,1644	0/0:14,0:14:39.13:0,39,959	0/0:22,0:21:51.17:0,51,1219	0/0:24,0:24:63.08:0,63,1435	0/0:10,0:10:16.61:0,17,366	0/0:7,0:7:15.05:0,15,369	0/0:21,0:21:42.13:0,42,950	0/0:24,0:24:63.19:0,63,1478	0/0:17,0:17:48.15:0,48,1125	0/0:23,0:23:57.20:0,57,1403	0/0:29,0:29:72.23:0,72,1658	0/0:12,0:12:21.07:0,21,516
chr10	74895838	.	GTGTT	G	2644.37	PASS	AB=0.923;AC=13;AF=0.232;AN=56;BaseQRankSum=10.425;DP=571;FS=10.603;HRun=0;HaplotypeScore=94.0347;InbreedingCoeff=0.8859;MQ=64.58;MQ0=2;MQRankSum=-1.862;QD=21.33;ReadPosRankSum=0.357;VQSLOD=2.2291;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:69.24:0,69,1626	0/0:8,0:8:15.05:0,15,361	0/0:30,0:23:15.52:0,16,305	0/0:18,0:14:13.84:0,14,285	0/0:17,0:17:33.11:0,33,786	0/1:11,1:12:24.42:24,0,408	0/0:17,0:17:39.12:0,39,862	0/0:40,0:40:48.14:0,48,1017	0/0:20,0:20:44.97:0,45,974	0/0:24,0:24:57.19:0,57,1325	0/0:24,0:24:45.14:0,45,1029	0/0:23,0:23:42.14:0,42,1010	0/0:20,0:20:30.10:0,30,721	0/0:12,0:12:21.07:0,21,504	0/0:23,0:23:39.13:0,39,934	0/0:20,0:20:36.12:0,36,859	0/0:27,0:27:54.18:0,54,1286	0/0:24,0:24:54.18:0,54,1213	1/1:9,6:15:18.04:243,18,0	1/1:12,18:31:42.07:620,42,0	1/1:1,9:10:27.05:405,27,0	0/0:7,0:7:18.06:0,18,429	0/0:20,0:20:39.13:0,39,908	0/0:24,0:24:54.18:0,54,1231	0/0:18,0:18:39.13:0,39,932	1/1:10,8:18:24.08:385,24,0	1/1:7,17:24:48.16:771,48,0	1/1:4,10:13:24.08:385,24,0
chr10	74896113	.	CGTGGAGT	C	5309.56	PASS	AB=0.571;AC=11;AF=0.196;AN=56;BaseQRankSum=12.258;DP=581;FS=12.413;HRun=0;HaplotypeScore=137.7624;InbreedingCoeff=0.8534;MQ=75.21;MQ0=0;MQRankSum=-13.025;QD=47.83;ReadPosRankSum=2.213;VQSLOD=4.1024;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.25:0,72,2731	0/0:10,0:10:27.09:0,27,1043	0/0:17,0:17:27.09:0,27,838	0/0:20,0:16:39.12:0,39,1055	0/0:20,0:20:48.16:0,48,1816	0/0:28,0:27:81.28:0,81,3092	0/0:30,0:30:81.24:0,81,2918	0/0:33,0:33:75.25:0,75,2771	0/0:23,0:23:66.23:0,66,2492	0/0:28,0:28:75.09:0,75,2719	0/0:20,0:20:48.16:0,48,1855	0/0:16,0:16:45.15:0,45,1740	0/0:20,0:20:48.16:0,48,1785	0/0:24,0:24:66.23:0,66,2465	0/0:16,0:16:39.13:0,39,1498	0/0:8,0:8:21.07:0,21,812	0/0:25,0:25:66.23:0,66,2351	0/0:18,0:18:42.14:0,42,1588	1/1:5,11:16:30.10:739,30,0	1/1:4,22:26:54.19:1329,54,0	1/1:6,8:14:5.98:111,6,0	0/0:22,0:22:63.20:0,63,2318	0/0:26,0:26:69.24:0,69,2595	0/0:21,0:21:63.22:0,63,2434	0/0:17,0:17:45.15:0,45,1719	0/1:7,21:28:49.80:1484,0,50	1/1:1,22:23:57.15:1350,57,0	1/1:0,4:4:12.04:296,12,0
chr10	74897516	.	TACACACACAC	T	677.90	PASS	AB=0.933;AC=16;AF=0.421;AN=38;BaseQRankSum=3.855;DP=439;FS=22.469;HRun=0;HaplotypeScore=114.0435;InbreedingCoeff=0.5140;MQ=55.61;MQ0=26;MQRankSum=-4.452;QD=4.81;ReadPosRankSum=-0.704;VQSLOD=0.7392;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:5:3.01:0,3,91	./.	./.	0/0:5,0:5:6.02:0,6,173	0/0:11,0:11:15.01:0,15,369	0/0:20,0:19:6.02:0,6,166	0/0:16,0:16:6.86:0,7,60	1/1:9,2:11:3.01:88,3,0	./.	./.	1/1:17,3:20:6.02:176,6,0	1/1:5,1:6:3.01:50,3,0	0/0:14,0:18:9.92:0,10,281	1/1:17,2:25:6.01:60,6,0	0/1:9,0:8:0:0,0,0	0/0:25,0:24:15.04:0,15,357	0/0:16,0:18:20.19:0,20,584	1/1:13,0:14:3.01:70,3,0	./.	./.	./.	./.	0/1:22,0:25:11.06:14,0,11	1/1:9,0:16:9.03:209,9,0	0/0:16,0:14:0.47:0,0,1	1/1:10,0:13:9.02:143,9,0	0/0:3,0:2:0.89:0,1,2
chr10	74898119	.	TCCCC	T	2290.50	PASS	AB=0.967;AC=23;AF=0.411;AN=56;BaseQRankSum=6.935;DP=333;FS=11.346;HRun=7;HaplotypeScore=72.4761;InbreedingCoeff=0.5898;MQ=69.30;MQ0=5;MQRankSum=-6.555;QD=16.24;ReadPosRankSum=0.005;VQSLOD=-0.2762;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,9:19:47.35:550,47,0	0/0:2,0:2:6.01:0,6,108	0/0:20,0:9:20.63:0,21,395	0/0:23,0:14:17.86:0,18,439	0/0:16,0:16:45.10:0,45,805	0/0:10,0:10:27.08:0,27,616	0/0:14,0:14:39.09:0,39,877	0/0:27,0:27:56.71:0,57,999	1/1:6,11:16:42.11:534,42,0	0/1:16,0:16:44.77:45,0,449	0/0:17,0:17:6.17:0,6,367	1/1:9,3:11:26.40:236,26,0	1/1:4,7:11:33.06:387,33,0	0/0:11,0:11:30.06:0,30,588	0/0:22,0:22:54.16:0,54,1287	0/0:13,0:13:8.16:0,8,450	0/0:9,0:9:24.07:0,24,543	0/0:4,0:4:12.04:0,12,286	1/1:5,0:4:9.01:82,9,0	1/1:6,0:6:8.47:74,8,0	0/1:12,0:11:13.84:54,0,14	1/1:3,2:5:8.49:93,8,0	1/1:7,5:12:29.98:316,30,0	1/1:5,2:7:6:62,6,0	0/1:11,0:11:3.05:3,0,274	0/1:4,1:5:27.82:36,0,28	0/0:3,0:2:6.02:0,6,82	0/1:3,0:3:1.42:18,0,1
chr10	74898122	.	C	CT	421.20	PASS	AB=0.931;AC=17;AF=0.304;AN=56;BaseQRankSum=5.961;DP=320;FS=5.125;HRun=0;HaplotypeScore=60.8595;InbreedingCoeff=0.1404;MQ=66.31;MQ0=8;MQRankSum=-5.362;QD=3.34;ReadPosRankSum=-1.131;VQSLOD=1.9675;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:33.27:33,0,35	0/0:2,0:2:6.02:0,6,83	0/0:23,0:10:21.05:0,21,263	0/0:21,0:12:26.98:0,27,318	0/0:16,0:16:45.05:0,45,554	0/0:9,0:9:27.08:0,27,360	0/0:14,0:14:42.11:0,42,550	0/0:23,0:23:57.13:0,57,687	1/1:17,0:16:6.58:95,7,0	0/1:15,0:15:51.76:52,0,64	0/0:17,0:17:19.89:0,20,193	0/1:12,0:10:6.60:64,0,7	1/1:13,0:12:6.28:81,6,0	0/0:11,0:10:30.05:0,30,354	0/0:20,0:20:57.16:0,57,746	0/0:12,0:12:4.33:0,4,79	0/0:9,0:9:24.06:0,24,317	0/0:4,0:4:12.04:0,12,167	0/1:6,0:4:14.52:17,0,15	1/1:5,0:5:1.57:65,2,0	0/1:10,1:10:22.71:50,0,23	0/1:4,0:4:8.78:16,0,9	0/1:11,0:11:20.89:54,0,21	1/1:6,0:6:3.46:24,3,0	0/0:10,0:10:1.70:0,2,92	0/1:3,1:4:8.44:15,0,8	0/1:2,2:3:4.72:14,0,5	0/0:3,0:3:8.35:0,8,40
chr10	74898123	.	C	CCCT	215.78	PASS	AB=0.971;AC=9;AF=0.161;AN=56;BaseQRankSum=5.250;DP=316;FS=1.671;HRun=0;HaplotypeScore=77.5328;InbreedingCoeff=-0.0040;MQ=64.29;MQ0=9;MQRankSum=-2.772;QD=2.63;ReadPosRankSum=-0.077;VQSLOD=1.3506;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:13.70:14,0,182	0/0:2,0:2:6.02:0,6,87	0/0:23,0:10:21.06:0,21,297	0/0:20,0:11:23.94:0,24,332	0/0:16,0:16:40.66:0,41,539	0/0:9,0:9:27.08:0,27,411	0/0:13,0:13:39.12:0,39,607	0/0:21,0:20:45.08:0,45,650	0/1:17,0:16:38.03:38,0,202	0/0:15,0:15:32.36:0,32,223	0/0:17,0:17:44.79:0,45,371	0/1:12,0:10:39.49:69,0,39	0/1:13,0:12:80.22:80,0,97	0/0:11,0:10:21.06:0,21,324	0/0:19,0:19:54.16:0,54,830	0/0:11,0:11:29.80:0,30,220	0/0:9,0:9:24.07:0,24,361	0/0:4,0:4:12.04:0,12,192	0/0:6,0:4:0.18:0,0,25	0/0:2,0:2:2.94:0,3,18	0/0:10,1:10:8.78:0,9,85	0/1:5,0:5:8.97:9,0,11	0/0:12,0:12:1.55:0,2,104	0/1:6,0:6:13.98:14,0,17	0/0:10,0:10:26.81:0,27,214	0/1:3,1:4:32.87:33,0,44	1/1:2,2:3:9.01:96,9,0	0/0:3,0:3:8.92:0,9,63
chr10	74898129	.	CCTCT	C	2114.93	PASS	AB=0.900;AC=20;AF=0.370;AN=54;BaseQRankSum=8.988;DP=310;FS=5.366;HRun=0;HaplotypeScore=69.9519;InbreedingCoeff=0.7113;MQ=63.67;MQ0=10;MQRankSum=-6.927;QD=21.80;ReadPosRankSum=-0.137;VQSLOD=2.3215;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,9:18:40.01:517,40,0	0/0:1,0:1:3.01:0,3,72	0/0:22,0:9:20.98:0,21,278	0/0:23,0:12:21.50:0,21,356	0/0:12,0:12:21.07:0,21,491	0/0:11,0:11:29.30:0,29,609	0/0:15,0:15:45.13:0,45,1049	0/0:19,0:18:36.05:0,36,564	1/1:7,11:17:43.49:587,43,0	0/0:13,0:13:36.10:0,36,937	0/0:16,0:16:29.73:0,30,518	1/1:6,3:7:14.46:154,14,0	1/1:5,7:11:33.09:425,33,0	0/0:9,0:8:21.07:0,21,520	0/0:21,0:21:52.58:0,53,1225	0/0:10,0:10:30.10:0,30,802	0/0:12,0:12:30.01:0,30,610	0/0:5,0:5:15.02:0,15,335	1/1:4,2:4:8.96:71,9,0	./.	0/0:11,0:10:1.22:0,1,18	1/1:3,2:5:9.02:102,9,0	1/1:5,6:11:24.06:314,24,0	1/1:4,2:6:5.23:49,5,0	0/0:10,0:10:21.05:0,21,525	0/1:3,1:4:23.14:49,0,23	0/1:4,0:3:16.91:17,0,70	1/1:3,0:3:3:26,3,0
chr10	74899163	.	C	CA	5895.26	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.290;DP=763;FS=9.188;HRun=6;HaplotypeScore=104.7338;InbreedingCoeff=0.9992;MQ=75.56;MQ0=0;MQRankSum=-1.168;QD=31.19;ReadPosRankSum=3.778;VQSLOD=4.1106;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:81.26:1016,81,0	0/0:21,0:21:57.13:0,57,582	0/0:22,0:22:33.65:0,34,464	0/0:18,0:17:41.06:0,41,387	0/0:37,0:37:99:0,102,1031	0/0:43,0:43:99:0,108,1102	0/0:16,0:16:48.10:0,48,483	0/0:44,0:44:99:0,111,1127	1/1:6,24:30:66.21:824,66,0	0/0:29,0:29:84.18:0,84,852	0/0:24,0:24:63.11:0,63,633	1/1:2,24:26:66.21:829,66,0	1/1:4,23:27:66.16:811,66,0	0/0:30,0:30:78.17:0,78,796	0/0:37,0:37:96.20:0,96,973	0/0:35,0:35:99:0,102,1041	0/0:21,0:21:60.14:0,60,612	0/0:19,0:19:37.01:0,37,448	0/0:23,0:23:36.11:0,36,502	0/0:29,0:29:81.18:0,81,826	0/0:34,0:34:81.15:0,81,812	1/1:3,21:24:63.20:793,63,0	1/1:3,27:30:75.24:943,75,0	1/1:2,22:24:54.17:679,54,0	0/0:22,0:22:63.14:0,63,642	0/0:31,0:31:81.16:0,81,819	0/0:32,0:32:96.22:0,96,979	0/0:7,0:7:21.05:0,21,214
chr10	74899475	.	CAG	C	2182.17	PASS	AB=0.883;AC=16;AF=0.286;AN=56;BaseQRankSum=8.631;DP=873;FS=19.715;HRun=0;HaplotypeScore=192.5608;InbreedingCoeff=0.5685;MQ=60.90;MQ0=48;MQRankSum=-5.726;QD=8.43;ReadPosRankSum=0.379;VQSLOD=2.1152;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,23:39:19.46:195,0,19	0/1:13,0:12:1.90:2,0,396	0/0:74,0:21:11.98:0,12,126	0/0:90,0:20:5.91:0,6,51	0/0:31,0:31:60.17:0,60,848	0/1:18,2:20:31.21:31,0,406	0/0:27,2:29:3.90:0,4,709	0/0:33,0:32:57.09:0,57,726	1/1:10,13:22:36.10:398,36,0	0/0:22,0:22:45.80:0,46,406	0/0:28,0:28:5.99:0,6,48	1/1:12,21:32:42.55:613,43,0	1/1:9,21:29:54.15:604,54,0	0/0:26,0:26:66.22:0,66,989	0/0:28,1:29:27.99:0,28,801	0/1:31,1:32:2.02:2,0,293	0/0:33,0:32:28.72:0,29,874	0/0:19,0:20:31.03:0,31,639	0/0:10,0:23:34.67:0,35,455	0/0:11,0:25:0.44:0,0,22	0/0:20,0:46:15.47:0,15,150	1/1:11,12:21:15.48:160,15,0	1/1:7,8:16:21.04:224,21,0	1/1:9,17:25:12.44:135,12,0	0/0:21,0:21:5.99:0,6,50	0/0:12,0:40:72.17:0,72,824	0/0:12,0:30:21.01:0,21,200	0/0:3,0:10:3:0,3,26
chr10	74899499	.	GAC	G	1907.11	PASS	AB=0.990;AC=26;AF=0.464;AN=56;BaseQRankSum=9.886;DP=838;FS=4.499;HRun=0;HaplotypeScore=197.5882;InbreedingCoeff=0.3584;MQ=48.12;MQ0=46;MQRankSum=-5.048;QD=3.81;ReadPosRankSum=-1.843;VQSLOD=2.6875;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:40:15.37:59,0,15	0/0:17,0:16:34.64:0,35,508	0/0:55,0:6:4.25:0,4,46	0/1:72,0:12:9.61:10,0,73	0/0:37,0:36:93:0,93,1040	0/0:26,0:26:41.82:0,42,574	0/0:28,1:29:20.58:0,21,880	0/0:39,0:36:84:0,84,846	1/1:19,0:18:34.38:190,34,0	0/1:33,0:32:32.38:32,0,412	0/0:22,2:24:17.86:0,18,144	1/1:27,0:26:25.15:280,25,0	1/1:31,0:30:64.25:391,64,0	0/0:26,0:26:78.18:0,78,1111	0/0:32,0:32:73.52:0,74,1030	0/1:28,1:29:36.32:36,0,235	0/0:28,0:27:65.22:0,65,1064	0/0:24,0:23:68.62:0,69,950	0/1:20,1:21:44.07:44,0,91	1/1:27,1:27:31.84:257,32,0	1/1:45,0:45:25.14:338,25,0	1/1:18,0:16:10.85:49,11,0	1/1:16,0:16:16.63:81,17,0	1/1:28,0:27:2.81:55,3,0	0/1:24,0:24:28.86:29,0,98	0/1:32,0:32:99:126,0,204	0/1:24,0:22:34.41:73,0,34	1/1:11,0:11:3.82:54,4,0
chr10	74899513	.	CAGACAGACAGACAGACA	C	9897.47	PASS	AB=0.792;AC=14;AF=0.250;AN=56;BaseQRankSum=12.819;DP=799;FS=9.064;HRun=0;HaplotypeScore=351.2881;InbreedingCoeff=0.8277;MQ=50.91;MQ0=39;MQRankSum=-8.063;QD=46.69;ReadPosRankSum=-1.251;VQSLOD=2.3226;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,9:36:17.59:514,18,0	0/0:17,0:16:48.14:0,48,2669	0/0:42,0:8:24.06:0,24,508	0/0:59,0:16:38.43:0,38,996	0/0:39,0:38:99:0,102,5151	0/0:26,0:26:67.80:0,68,3324	0/0:36,0:36:99:0,100,5126	0/0:39,0:37:99:0,105,4221	1/1:10,9:21:48.16:1911,48,0	0/0:31,0:30:87.16:0,87,4224	0/0:23,0:23:28.51:0,29,1434	1/1:11,17:30:62.42:2660,62,0	1/1:14,14:33:80.07:3027,80,0	0/0:31,0:31:93.32:0,93,5194	0/0:31,0:31:87.26:0,87,5152	0/1:27,1:28:97:97,0,2482	0/0:26,0:26:75.26:0,75,4774	0/0:26,0:25:75.26:0,75,4907	0/0:15,0:15:42.13:0,42,1441	0/0:25,0:24:54.18:0,54,2238	0/0:41,0:41:75.26:0,75,3219	1/1:9,6:18:23.67:584,24,0	1/1:13,6:20:24.33:667,24,0	0/1:10,11:25:5.49:439,0,5	0/0:21,0:21:27.09:0,27,1301	0/0:21,0:21:60.21:0,60,3354	0/0:27,0:26:58.96:0,59,2835	0/0:10,0:10:18.06:0,18,724
chr10	74899529	.	CA	C	3669.55	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.535;DP=790;FS=7.397;HRun=1;HaplotypeScore=185.7164;InbreedingCoeff=0.9910;MQ=56.67;MQ0=11;MQRankSum=-4.984;QD=20.05;ReadPosRankSum=2.735;VQSLOD=3.4490;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,23:32:23.71:294,24,0	0/0:16,0:16:48.16:0,48,743	0/0:34,0:15:45.03:0,45,592	0/0:46,0:22:51.57:0,52,692	0/0:39,0:39:99:0,111,1663	0/0:23,0:23:59.31:0,59,885	0/0:39,0:39:99:0,106,1586	0/0:38,0:36:99:0,108,1581	1/1:9,12:21:48.14:578,48,0	0/0:26,0:25:75.25:0,75,1151	0/0:18,0:18:30.36:0,30,464	1/1:17,16:33:77.29:875,77,0	1/1:15,20:35:92.55:1129,93,0	0/0:26,0:26:78.23:0,78,1171	0/0:41,0:41:99:0,120,1814	0/0:27,0:27:22.27:0,22,728	0/0:29,0:29:84.26:0,84,1277	0/0:27,0:27:81.24:0,81,1225	0/0:20,0:20:57.14:0,57,806	0/0:28,0:28:71.91:0,72,822	0/0:45,0:45:95.88:0,96,1089	1/1:6,11:17:23.90:331,24,0	1/1:7,14:21:22.99:292,23,0	1/1:12,12:24:11.14:171,11,0	0/0:18,0:18:30.10:0,30,463	0/0:25,0:25:75.14:0,75,1083	0/0:29,0:29:66.63:0,67,911	0/0:13,0:13:27.05:0,27,340
chr10	74900668	.	A	AT	1325.78	PASS	AB=0.602;AC=10;AF=0.179;AN=56;BaseQRankSum=-2.224;DP=395;FS=1.961;HRun=10;HaplotypeScore=62.6710;InbreedingCoeff=0.7472;MQ=70.08;MQ0=6;MQRankSum=0.541;QD=17.22;ReadPosRankSum=-1.826;VQSLOD=3.7069;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:16.91:0,17,166	0/0:6,0:6:11.96:0,12,98	0/0:19,0:11:5.66:0,6,48	0/0:18,0:6:11.98:0,12,97	0/0:23,0:23:53.87:0,54,437	0/0:17,0:17:35.94:0,36,295	0/0:8,0:8:14.97:0,15,123	0/0:31,0:34:63.76:0,64,494	0/0:4,0:4:8.99:0,9,74	0/0:24,0:25:43.93:0,44,351	0/0:12,0:12:20.95:0,21,172	0/0:8,0:7:14.98:0,15,123	0/0:12,0:12:11.96:0,12,98	0/0:11,0:12:22.98:0,23,178	0/0:11,0:11:17.94:0,18,148	0/0:12,0:12:14.95:0,15,123	0/0:16,0:18:36.99:0,37,282	0/0:24,0:24:41.38:0,41,329	1/1:5,8:14:26.23:307,26,0	0/1:3,7:10:0.59:193,0,1	1/1:1,4:5:9.02:96,9,0	0/0:9,0:9:17.93:0,18,144	0/0:6,0:6:14.97:0,15,123	0/0:5,0:6:8.93:0,9,68	0/0:19,0:19:38.93:0,39,318	1/1:5,14:20:20.30:405,20,0	1/1:9,11:20:35.94:345,36,0	0/1:3,5:8:6.60:142,0,7
chr10	74900682	.	GT	G	511.53	PASS	AB=0.896;AC=15;AF=0.268;AN=56;BaseQRankSum=2.424;DP=385;FS=4.797;HRun=10;HaplotypeScore=52.8641;InbreedingCoeff=0.6461;MQ=63.04;MQ0=12;MQRankSum=-2.023;QD=6.64;ReadPosRankSum=-0.238;VQSLOD=1.0538;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,9:15:18.13:200,18,0	0/0:7,0:6:15.04:0,15,166	0/0:27,0:8:14.88:0,15,105	0/0:23,0:6:8.50:0,9,59	0/0:26,1:27:42.70:0,43,627	0/0:13,0:13:30.06:0,30,322	0/0:6,0:6:18.05:0,18,199	0/0:31,0:31:79.96:0,80,839	1/1:4,3:7:5.32:51,5,0	0/0:22,0:22:51.12:0,51,544	0/0:9,0:10:23.89:0,24,237	1/1:2,5:6:11.99:104,12,0	1/1:5,5:10:21.61:169,22,0	0/0:13,0:13:36.07:0,36,376	0/0:10,0:10:27.07:0,27,294	0/1:7,1:8:11.02:11,0,118	0/0:17,0:17:41.87:0,42,441	0/0:21,0:21:27.71:0,28,467	0/0:14,0:13:30.07:0,30,323	0/1:9,0:9:4.54:5,0,178	0/0:4,0:4:3.01:0,3,33	0/1:6,2:7:4.90:19,0,5	1/1:4,2:6:5.88:75,6,0	1/1:4,2:6:6:52,6,0	0/0:21,0:21:33.05:0,33,343	0/0:17,0:16:45.08:0,45,484	0/0:19,0:18:38.66:0,39,384	0/0:6,0:6:6.02:0,6,66
chr10	74900803	.	G	GA	989	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-5.841;DP=355;FS=2.185;HRun=9;HaplotypeScore=37.4550;InbreedingCoeff=0.8782;MQ=76.01;MQ0=0;MQRankSum=-1.907;QD=19.02;ReadPosRankSum=0.225;VQSLOD=3.4222;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:21:24.87:472,25,0	0/0:6,0:6:11.99:0,12,104	0/0:11,0:11:11.98:0,12,104	0/0:14,0:12:14.86:0,15,109	0/0:23,0:23:53.98:0,54,469	0/0:21,0:21:30.45:0,30,412	0/0:12,0:12:26.99:0,27,234	0/0:25,0:25:62.97:0,63,547	1/1:1,3:4:6.02:66,6,0	0/0:9,0:9:23.99:0,24,208	0/0:14,0:14:41.99:0,42,365	1/1:3,2:5:6.02:66,6,0	1/1:1,7:8:18.05:199,18,0	0/0:11,0:11:29.98:0,30,256	0/0:5,0:5:9:0,9,78	0/0:6,0:6:12:0,12,104	0/0:33,0:33:86.98:0,87,755	0/0:10,0:10:20.97:0,21,177	0/0:16,0:16:29.97:0,30,257	0/0:19,0:19:38.97:0,39,335	0/0:4,0:4:12:0,12,104	1/1:0,2:2:6.02:66,6,0	1/1:3,3:6:9.02:100,9,0	1/1:0,6:6:18.05:199,18,0	0/0:14,1:15:8.81:0,9,305	0/0:16,0:16:41.99:0,42,365	0/0:19,0:19:53.95:0,54,460	0/0:13,0:13:23.98:0,24,208
chr10	74901946	.	CTG	C	2376.15	PASS	AB=0.903;AC=12;AF=0.214;AN=56;BaseQRankSum=11.365;DP=710;FS=4.731;HRun=0;HaplotypeScore=103.6750;InbreedingCoeff=0.5343;MQ=68.79;MQ0=5;MQRankSum=-0.352;QD=11.59;ReadPosRankSum=2.437;VQSLOD=3.1386;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:55.86:0,56,874	0/0:6,0:6:18.06:0,18,288	0/0:37,1:26:1.92:0,2,449	0/0:35,0:23:27.07:0,27,393	0/0:12,0:12:24.08:0,24,384	0/0:16,1:17:39.13:0,39,624	0/1:25,6:31:20.39:20,0,669	0/0:38,0:38:66.69:0,67,1026	0/0:37,1:38:23.60:0,24,1156	1/1:5,18:24:53.99:616,54,0	1/1:7,12:20:29.87:359,30,0	0/1:21,2:23:26.80:27,0,562	0/0:22,0:22:42.11:0,42,602	0/0:25,1:26:24.22:0,24,875	0/0:29,1:30:21.22:0,21,825	1/1:3,32:36:66.71:965,67,0	0/0:34,1:35:75.23:0,75,1155	0/0:21,0:21:51.03:0,51,743	0/1:24,2:26:38.44:38,0,395	0/0:14,0:14:30.10:0,30,480	0/0:44,0:44:87.21:0,87,1325	0/0:15,0:15:27.09:0,27,426	0/0:18,1:19:9.15:0,9,610	0/0:25,0:25:57.19:0,57,900	1/1:5,15:20:42.13:504,42,0	0/1:23,2:25:20.80:21,0,666	0/0:33,2:34:33.27:0,33,995	0/0:8,0:8:21.07:0,21,332
chr10	74902218	.	TA	T	3989.39	PASS	AB=0.915;AC=36;AF=0.643;AN=56;BaseQRankSum=9.126;DP=587;FS=3.850;HRun=13;HaplotypeScore=71.7972;InbreedingCoeff=0.8366;MQ=71.49;MQ0=3;MQRankSum=0.572;QD=10.07;ReadPosRankSum=3.273;VQSLOD=3.3919;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:24:38.68:112,39,0	0/1:11,2:14:7.93:8,0,236	0/0:22,0:16:17.61:0,18,128	0/1:20,1:15:19.22:19,0,122	0/0:29,1:31:40.32:0,40,571	0/0:17,0:17:39.05:0,39,375	0/0:7,0:7:14.96:0,15,134	0/0:32,0:33:74.72:0,75,671	1/1:4,0:17:24.43:71,24,0	1/1:6,24:34:79.47:530,79,0	1/1:3,17:21:17.55:282,18,0	1/1:1,1:19:33.54:110,34,0	1/1:3,1:18:21.30:75,21,0	0/0:21,0:21:36.05:0,36,346	0/0:16,1:18:22.23:0,22,381	1/1:5,16:21:44.69:327,45,0	0/0:22,1:23:26.14:0,26,405	0/0:17,0:17:32.97:0,33,309	1/1:7,12:19:12.33:243,12,0	1/1:5,24:30:64.61:465,65,0	1/1:1,13:15:34.84:247,35,0	1/1:4,0:22:30.52:88,31,0	1/1:3,0:26:44.81:130,45,0	1/1:2,0:9:12.22:35,12,0	1/1:6,18:24:18.53:299,19,0	1/1:4,23:27:42.41:474,42,0	1/1:6,16:21:29.09:310,29,0	1/1:4,8:13:12.71:165,13,0
chr10	74902891	.	GA	G	2757.90	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.101;DP=542;FS=0.000;HRun=8;HaplotypeScore=51.4146;InbreedingCoeff=0.9855;MQ=61.25;MQ0=1;MQRankSum=0.537;QD=23.57;ReadPosRankSum=0.961;VQSLOD=4.1034;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.21:0,75,893	0/0:13,0:13:36.11:0,36,434	0/0:8,0:7:11.60:0,12,93	0/0:4,0:4:12.04:0,12,145	0/0:34,1:35:67.30:0,67,1082	0/0:25,0:24:63.19:0,63,761	0/0:14,0:14:39.12:0,39,471	0/0:21,0:21:51.16:0,51,616	0/0:14,0:14:42.13:0,42,507	0/0:26,0:26:69.21:0,69,833	0/0:31,0:31:75.21:0,75,883	0/0:16,0:16:48.15:0,48,580	0/0:23,0:23:66.20:0,66,797	0/0:12,0:12:30.09:0,30,362	0/0:18,0:18:45.14:0,45,544	0/0:19,0:19:57.15:0,57,674	0/0:19,0:19:39.12:0,39,467	0/0:25,1:26:37.19:0,37,703	1/1:2,10:12:30.02:290,30,0	1/1:3,23:26:66.06:628,66,0	1/1:0,9:9:24.04:232,24,0	0/0:18,0:18:48.14:0,48,570	0/0:23,0:23:57.13:0,57,672	0/0:7,0:7:21.06:0,21,254	0/0:25,0:25:60.14:0,60,708	1/1:2,17:19:51.08:493,51,0	1/1:0,31:31:89.84:869,90,0	1/1:3,17:20:45.07:435,45,0
chr10	74902993	.	AGTGT	A	2245.40	PASS	AB=0.709;AC=11;AF=0.196;AN=56;BaseQRankSum=-1.406;DP=559;FS=10.094;HRun=0;HaplotypeScore=112.1016;InbreedingCoeff=0.6001;MQ=58.67;MQ0=7;MQRankSum=-0.246;QD=16.63;ReadPosRankSum=-0.324;VQSLOD=2.6627;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:64.03:0,64,931	0/0:8,0:9:20.79:0,21,399	0/0:13,0:9:11.99:0,12,122	0/0:18,0:8:3.01:0,3,30	0/1:19,1:22:12.71:13,0,967	0/0:17,0:18:35.85:0,36,768	0/0:22,0:23:39.12:0,39,804	0/0:26,0:31:40.63:0,41,594	0/0:19,0:19:42.14:0,42,650	0/0:9,0:15:18.02:0,18,233	0/0:5,0:9:3.10:0,3,73	0/0:22,0:22:42.14:0,42,656	0/0:14,0:14:30.10:0,30,473	0/0:19,0:23:57.40:0,57,1244	0/0:22,0:23:59.94:0,60,1326	0/0:11,0:23:33.10:0,33,632	0/0:23,0:26:59.39:0,59,1133	0/0:20,0:20:26.39:0,26,803	1/1:11,2:15:23.98:267,24,0	0/1:5,6:11:60.30:105,0,60	1/1:4,20:25:42.14:680,42,0	0/0:14,0:14:20.19:0,20,284	0/0:30,0:28:38.42:0,38,527	0/0:23,0:22:42.14:0,42,658	0/0:4,0:17:25.01:0,25,412	0/1:6,10:17:17.32:406,0,17	1/1:14,16:30:34.87:642,35,0	1/1:8,6:14:21.04:302,21,0
chr10	74902997	.	T	TGA	5334.40	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=-6.731;DP=572;FS=1.822;HRun=0;HaplotypeScore=86.0633;InbreedingCoeff=0.6195;MQ=58.35;MQ0=8;MQRankSum=1.179;QD=23.40;ReadPosRankSum=5.539;VQSLOD=4.9096;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:35:59.10:1159,59,0	0/0:8,0:8:23.99:0,24,292	0/0:14,0:9:20.13:0,20,219	0/0:19,0:9:16.68:0,17,166	0/0:22,0:22:57.02:0,57,721	0/0:20,0:20:54.07:0,54,655	0/0:24,0:24:35.10:0,35,675	0/0:31,0:31:86.32:0,86,890	1/1:1,17:19:31.73:738,32,0	0/1:15,0:15:80.58:81,0,152	0/0:10,0:10:1.58:0,2,145	1/1:4,17:22:25.17:732,25,0	1/1:1,13:14:17.84:507,18,0	0/0:23,0:23:41.99:0,42,815	0/0:25,0:25:75.15:0,75,1008	0/1:23,0:23:81.51:82,0,320	0/0:27,0:27:75.07:0,75,929	0/0:20,0:20:59.88:0,60,706	0/0:17,0:16:5.48:0,5,258	0/0:11,0:11:20.80:0,21,166	0/0:26,0:25:35.75:0,36,269	1/1:1,14:15:24.08:447,24,0	1/1:5,27:30:37.11:727,37,0	1/1:2,24:25:9.87:714,10,0	0/1:16,0:16:31.52:140,0,32	0/0:18,0:17:15.14:0,15,249	0/0:29,0:29:80.24:0,80,578	0/1:11,0:11:9.10:9,0,141
chr10	74904055	.	GGT	G	500.51	PASS	AB=0.858;AC=22;AF=0.423;AN=52;BaseQRankSum=7.929;DP=491;FS=14.150;HRun=0;HaplotypeScore=86.2294;InbreedingCoeff=0.1657;MQ=65.38;MQ0=7;MQRankSum=-3.762;QD=2.03;ReadPosRankSum=2.247;VQSLOD=0.8646;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,3:38:8.78:0,9,502	1/1:3,0:3:2.99:24,3,0	./.	./.	0/0:9,0:9:18.02:0,18,244	0/1:14,1:17:13.90:14,0,246	0/0:28,3:31:8.19:0,8,478	0/0:24,0:23:6.02:0,6,91	0/1:18,2:20:3.23:3,0,352	0/0:3,0:6:8.99:0,9,75	0/0:8,0:14:20.90:0,21,216	0/1:21,5:26:54.85:55,0,475	0/1:10,1:11:12.22:12,0,248	0/1:12,3:15:6.57:7,0,331	0/1:17,3:20:27.48:27,0,417	0/0:14,0:21:27.02:0,27,290	0/1:22,4:26:54.64:55,0,455	0/1:7,5:12:99:112,0,115	1/1:5,0:11:19.89:98,20,0	1/1:7,0:12:8.52:42,9,0	1/1:16,0:20:2.84:14,3,0	0/0:7,0:7:12.02:0,12,159	0/1:9,0:10:2.08:2,0,124	0/0:31,4:34:11.82:0,12,552	0/0:13,0:13:15:0,15,162	0/1:13,0:18:6.12:64,0,6	1/1:6,0:14:17.04:84,17,0	1/1:5,0:7:11.36:56,11,0
chr10	74904107	.	TTTCCTTCCTTCCTTCCTTCCTTCCTTCC	T	3221.30	PASS	AB=0.909;AC=11;AF=0.196;AN=56;BaseQRankSum=6.042;DP=391;FS=13.676;HRun=0;HaplotypeScore=270.0204;InbreedingCoeff=0.8106;MQ=57.16;MQ0=8;MQRankSum=-8.751;QD=46.69;ReadPosRankSum=0.534;VQSLOD=0.5544;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:48.16:0,48,3280	0/0:4,0:4:9.03:0,9,639	0/0:23,0:16:28.84:0,29,371	0/0:18,0:10:8.27:0,8,250	0/0:4,0:4:9.03:0,9,816	0/0:14,0:14:30.09:0,30,1799	0/0:21,0:21:51.18:0,51,3260	0/0:20,0:20:42.13:0,42,1667	0/0:14,0:14:33.11:0,33,1573	0/0:11,0:11:30.10:0,30,2290	0/0:6,0:6:12.04:0,12,687	0/0:22,0:22:39.13:0,39,2800	0/0:10,0:10:18.06:0,18,1152	0/0:15,0:15:18.06:0,18,1201	0/0:18,0:18:42.11:0,42,2603	0/0:11,0:11:15.05:0,15,1546	0/0:22,0:21:36.07:0,36,1668	0/0:11,0:10:24.04:0,24,1601	1/1:13,0:12:24.03:533,24,0	1/1:7,1:8:17.95:348,18,0	1/1:14,0:13:11.40:221,11,0	0/0:7,0:8:21.07:0,21,1185	0/0:10,0:10:24.08:0,24,1693	0/0:22,0:21:36.06:0,36,1686	0/0:13,0:13:33.11:0,33,2360	0/1:18,2:19:99:1322,0,329	1/1:7,1:8:18.06:563,18,0	1/1:5,1:6:9.03:405,9,0
chr10	74905306	.	A	AC	6484.76	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-8.803;DP=486;FS=2.276;HRun=8;HaplotypeScore=56.0663;InbreedingCoeff=0.9335;MQ=80.76;MQ0=0;MQRankSum=-1.499;QD=21.91;ReadPosRankSum=2.774;VQSLOD=5.1796;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,12:18:36.98:408,37,0	0/0:12,0:12:33.02:0,33,302	0/0:14,0:14:23.59:0,24,218	0/0:16,0:17:24.79:0,25,205	0/0:19,0:19:54.01:0,54,489	0/0:26,0:26:72.03:0,72,658	0/0:15,0:15:36.02:0,36,329	0/0:29,0:29:66.02:0,66,601	1/1:1,13:14:30.09:346,30,0	1/1:8,2:19:25.73:150,26,0	1/1:2,0:17:14.20:72,14,0	1/1:3,12:15:2.62:284,3,0	1/1:3,15:18:39.12:450,39,0	0/0:10,0:10:24.01:0,24,219	0/0:19,0:19:47.99:0,48,432	1/1:3,1:13:17.35:113,17,0	0/0:21,0:21:57.03:0,57,521	0/0:8,0:8:21.01:0,21,192	1/1:6,7:13:2.44:254,2,0	1/1:1,14:15:11.65:388,12,0	1/1:1,18:19:54.16:623,54,0	1/1:4,18:22:51.15:586,51,0	1/1:3,19:22:32.82:550,33,0	1/1:0,15:15:45.13:519,45,0	1/1:4,1:16:14.37:92,14,0	1/1:2,23:25:63.16:714,63,0	1/1:4,23:27:57.06:658,57,0	1/1:0,8:8:24.07:277,24,0
chr10	74906031	.	TATATACAC	T	9089.74	PASS	AB=0.548;AC=11;AF=0.196;AN=56;BaseQRankSum=15.267;DP=695;FS=5.254;HRun=0;HaplotypeScore=177.9506;InbreedingCoeff=0.8863;MQ=84.73;MQ0=0;MQRankSum=-15.481;QD=67.33;ReadPosRankSum=-0.363;VQSLOD=4.3297;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.33:0,96,4211	0/0:11,0:11:33.11:0,33,1409	0/0:24,0:24:71.61:0,72,2860	0/0:25,0:25:71.99:0,72,2539	0/0:30,0:30:81.23:0,81,3377	0/0:36,0:36:99:0,105,4345	0/0:14,0:14:42.14:0,42,1779	0/0:42,0:42:99:0,126,5105	0/0:22,0:22:66.21:0,66,2835	0/0:34,0:34:99:0,99,4253	0/0:20,0:20:60.19:0,60,2583	0/0:27,0:27:81.28:0,81,3527	0/0:34,0:34:99:0,102,4602	0/0:27,0:27:81.28:0,81,3551	0/0:32,0:32:96.33:0,96,4228	0/0:29,0:29:84.26:0,84,3500	0/0:20,0:19:60.21:0,60,2560	0/0:17,0:17:51.10:0,51,1976	1/1:2,9:11:27.08:727,27,0	1/1:2,33:35:84.29:2240,84,0	1/1:0,13:13:33.07:794,33,0	0/0:27,0:27:81.28:0,81,3438	0/0:23,0:23:69.24:0,69,3114	0/0:16,0:16:48.15:0,48,2008	0/0:17,0:17:51.18:0,51,2188	0/1:6,28:34:48.67:2309,0,49	1/1:0,30:30:78.27:2232,78,0	1/1:1,11:12:27.09:787,27,0
chr10	74906829	.	T	TCAAA	4359.99	PASS	AB=0.807;AC=14;AF=0.250;AN=56;BaseQRankSum=-5.434;DP=705;FS=0.000;HRun=0;HaplotypeScore=114.0639;InbreedingCoeff=0.7726;MQ=64.96;MQ0=6;MQRankSum=1.380;QD=24.22;ReadPosRankSum=0.110;VQSLOD=4.1614;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:27:33.07:581,33,0	0/0:6,0:6:18.06:0,18,278	0/0:31,0:26:15.03:0,15,240	0/0:45,0:34:38.78:0,39,601	0/0:14,0:14:15.05:0,15,239	0/0:22,0:22:39.13:0,39,621	0/0:20,0:20:36.10:0,36,545	0/0:30,0:30:36.10:0,36,512	0/1:10,17:27:11.91:755,0,12	0/0:33,0:32:35.02:0,35,709	0/0:13,0:14:21.06:0,21,313	1/1:15,18:33:36.12:862,36,0	1/1:10,15:25:39.13:927,39,0	0/0:26,0:26:36.12:0,36,576	0/0:40,0:41:78.25:0,78,1198	0/0:35,1:36:3.15:0,3,1035	0/0:37,0:37:74.54:0,75,1184	0/1:19,0:19:16.88:17,0,316	0/0:19,0:18:13.29:0,13,237	0/0:15,0:15:18.04:0,18,264	0/0:38,0:38:69.22:0,69,1073	1/1:3,8:10:15.05:264,15,0	1/1:8,8:16:21.50:453,22,0	1/1:9,9:20:21.07:501,21,0	0/0:18,0:18:30.10:0,30,480	0/0:28,0:28:51.16:0,51,792	0/0:41,0:41:87.24:0,87,1336	0/0:9,0:9:27.09:0,27,410
chr10	74907673	.	A	AG	13678.61	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-16.469;DP=645;FS=0.000;HRun=0;HaplotypeScore=57.2652;InbreedingCoeff=0.9951;MQ=85.37;MQ0=0;MQRankSum=-2.158;QD=43.29;ReadPosRankSum=4.087;VQSLOD=5.1448;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,37:38:87.30:1390,87,0	0/0:4,0:4:12.04:0,12,167	0/0:19,0:19:57.17:0,57,776	0/0:22,0:22:63.14:0,63,831	0/0:32,0:32:93.31:0,93,1301	0/0:19,0:19:54.18:0,54,754	0/0:23,0:23:66.19:0,66,902	0/0:26,0:26:78.24:0,78,1060	1/1:0,25:25:69.24:1101,69,0	0/0:27,0:27:81.25:0,81,1103	0/0:18,0:18:54.17:0,54,741	1/1:0,22:22:63.21:1007,63,0	1/1:0,23:23:63.21:1007,63,0	0/0:20,0:20:54.11:0,54,751	0/0:26,0:26:78.25:0,78,1077	0/0:19,0:19:57.19:0,57,797	0/0:34,0:34:99:0,102,1409	0/0:17,0:17:48.16:0,48,670	1/1:0,25:25:75.26:1197,75,0	1/1:0,24:24:72.25:1151,72,0	1/1:0,28:28:81.28:1295,81,0	1/1:0,16:16:45.15:716,45,0	1/1:0,25:25:72.25:1147,72,0	1/1:2,26:28:75.25:1198,75,0	0/0:23,0:23:69.20:0,69,929	1/1:2,22:24:27.25:987,27,0	1/1:2,28:29:72.24:1150,72,0	1/1:1,7:8:21.07:333,21,0
chr10	74910708	.	AT	A	244.58	PASS	AB=0.609;AC=5;AF=0.119;AN=42;BaseQRankSum=2.967;DP=319;FS=18.501;HRun=15;HaplotypeScore=51.9167;InbreedingCoeff=0.3138;MQ=74.60;MQ0=1;MQRankSum=0.950;QD=5.56;ReadPosRankSum=2.031;VQSLOD=0.8055;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:3,0:5:8.84:0,9,67	0/0:17,0:12:3.41:0,3,105	0/0:13,0:8:0.31:0,0,59	0/0:15,1:17:19.31:0,19,256	0/0:9,0:9:17.96:0,18,149	0/0:12,1:14:13.57:0,14,232	0/0:24,0:29:48.42:0,48,401	./.	1/1:8,6:15:2.77:101,3,0	0/1:4,9:13:0.15:111,0,0	./.	./.	0/0:13,0:15:32.63:0,33,252	0/0:21,0:25:44.48:0,44,351	0/1:3,4:7:30.84:43,0,31	0/0:15,1:16:22.54:0,23,300	0/0:19,2:23:12.11:0,12,325	0/0:14,0:16:28.23:0,28,217	0/0:7,0:7:13.39:0,13,95	0/0:12,0:13:20.73:0,21,159	./.	./.	./.	0/1:3,6:9:5.82:95,0,6	0/0:13,0:16:29.52:0,30,227	0/0:22,1:26:23.16:0,23,399	0/0:10,0:14:28.66:0,29,242
chr10	74910875	.	CG	C	224.30	PASS	AB=1.000;AC=11;AF=0.262;AN=42;BaseQRankSum=2.823;DP=181;FS=1.106;HRun=1;HaplotypeScore=30.5320;InbreedingCoeff=0.5398;MQ=66.95;MQ0=27;MQRankSum=1.062;QD=3.74;ReadPosRankSum=2.005;VQSLOD=0.3153;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:5:14.92:0,15,112	0/0:12,0:3:2.03:0,2,39	0/1:20,0:11:0.15:0,0,23	0/0:6,0:6:15.33:0,15,103	0/0:2,0:1:3:0,3,25	0/0:15,0:12:23.34:0,23,173	0/0:4,0:2:2.97:0,3,20	./.	0/0:3,0:3:8.90:0,9,65	0/0:2,0:1:3:0,3,25	./.	./.	0/0:6,0:6:14.96:0,15,123	0/0:5,0:3:3:0,3,25	0/0:4,0:4:11.92:0,12,88	0/0:21,0:19:35.71:0,36,270	0/0:11,0:9:17.62:0,18,138	1/1:4,5:6:8.47:91,8,0	1/1:6,0:6:2.41:23,2,0	1/1:17,1:18:20.95:169,21,0	./.	./.	./.	0/0:5,0:3:8.98:0,9,72	1/1:3,0:3:3:26,3,0	0/0:8,0:7:2.04:0,2,6	1/1:4,0:4:5.96:44,6,0
chr10	74913309	.	T	TC	461.45	PASS	AB=0.815;AC=14;AF=0.250;AN=56;BaseQRankSum=1.626;DP=424;FS=8.589;HRun=1;HaplotypeScore=77.7340;InbreedingCoeff=0.7002;MQ=65.35;MQ0=2;MQRankSum=3.642;QD=3.88;ReadPosRankSum=0.963;VQSLOD=-0.1428;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:13:2.79:36,3,0	0/0:9,0:9:20.78:0,21,204	0/1:18,0:7:18.85:31,0,19	0/0:11,0:7:6.86:0,7,51	0/0:13,0:12:31.99:0,32,272	0/0:13,0:13:34.07:0,34,299	0/0:9,0:9:20.17:0,20,164	0/0:29,0:29:58.76:0,59,519	1/1:15,0:15:22.92:252,23,0	0/0:18,0:18:35.14:0,35,204	0/0:18,0:18:25.71:0,26,153	0/1:7,10:17:3.75:29,0,4	1/1:6,11:17:2.71:31,3,0	0/0:14,0:15:31.80:0,32,260	0/0:11,0:11:33:0,33,305	0/0:15,0:15:37.43:0,37,234	0/0:10,0:10:28.89:0,29,229	0/0:13,0:13:29.55:0,30,274	0/0:21,0:21:50.01:0,50,427	0/0:15,0:15:33.33:0,33,263	0/0:6,0:6:14.96:0,15,128	1/1:10,1:11:17.55:139,18,0	1/1:3,16:19:10.10:81,10,0	1/1:1,7:8:3.01:33,3,0	0/0:20,0:19:43.08:0,43,250	0/0:23,0:23:47.32:0,47,410	0/0:21,0:21:44.76:0,45,341	0/0:15,0:14:31.20:0,31,266
chr10	74913929	.	AACACACACACACGCACACACACACACACACAC	A	4965.38	PASS	AB=0.997;AC=22;AF=0.393;AN=56;BaseQRankSum=-1.781;DP=473;FS=15.926;HRun=0;HaplotypeScore=319.4029;InbreedingCoeff=-0.0938;MQ=55.33;MQ0=10;MQRankSum=0.800;QD=15.14;ReadPosRankSum=-4.044;VQSLOD=1.7526;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:37.06:0,37,2376	0/0:5,0:7:9.03:0,9,1123	0/0:17,0:3:7.91:0,8,110	0/0:24,0:5:14.88:0,15,172	0/0:5,0:5:12.04:0,12,1176	0/1:14,0:14:0.88:1,0,1366	0/1:18,0:17:21.41:21,0,1022	0/1:14,0:14:99:122,0,590	0/1:17,0:17:99:112,0,1476	1/1:4,19:22:34.65:537,35,0	1/1:2,21:24:18.06:1342,18,0	0/0:12,0:12:3.90:0,4,367	0/1:13,0:12:44.96:45,0,1889	0/1:21,0:21:9.16:9,0,3340	0/1:20,0:20:0.75:1,0,3658	1/1:10,2:13:8.88:802,9,0	0/1:30,0:28:58.18:58,0,4416	0/1:13,0:13:14.44:14,0,2578	0/1:13,0:12:26.79:27,0,1318	0/0:8,0:8:3.48:0,3,366	0/1:21,0:20:16.46:16,0,1895	0/0:13,0:13:3.48:0,3,354	0/0:11,0:11:5.91:0,6,721	0/1:24,0:23:67.69:68,0,4241	1/1:3,16:19:18.06:1428,18,0	0/1:20,1:21:99:345,0,2149	0/0:22,0:22:5.75:0,6,377	0/1:10,0:10:15.92:16,0,1058
chr10	74913940	.	ACG	A	6092.45	PASS	AB=0.958;AC=51;AF=0.911;AN=56;BaseQRankSum=-5.615;DP=498;FS=1.689;HRun=0;HaplotypeScore=111.5707;InbreedingCoeff=0.4466;MQ=54.47;MQ0=15;MQRankSum=0.590;QD=13.30;ReadPosRankSum=-1.988;VQSLOD=4.1757;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,3:26:44.91:368,45,0	1/1:6,0:6:8.10:69,8,0	0/0:16,0:3:5.65:0,6,17	0/0:23,0:5:10.98:0,11,74	1/1:12,0:12:15.14:198,15,0	1/1:10,0:10:21.86:176,22,0	1/1:19,1:18:38.71:318,39,0	1/1:6,6:11:31.13:242,31,0	1/1:17,0:17:20.40:293,20,0	1/1:20,0:19:29.51:217,30,0	1/1:22,0:22:11.65:65,12,0	1/1:0,15:15:2.88:45,3,0	1/1:12,2:13:14.24:244,14,0	1/1:23,1:24:34.63:398,35,0	1/1:22,2:24:9.71:454,10,0	1/1:12,0:12:26.03:170,26,0	1/1:37,1:36:22.69:618,23,0	1/1:16,0:15:2.43:211,2,0	1/1:3,9:11:29.85:232,30,0	1/1:1,14:14:2.88:45,3,0	1/1:22,0:20:44.82:349,45,0	1/1:7,6:13:11.99:102,12,0	1/1:0,12:12:6.02:91,6,0	0/1:22,1:22:49.34:273,0,49	1/1:16,0:16:12.15:68,12,0	1/1:19,0:19:53.73:438,54,0	1/1:0,23:23:5.86:65,6,0	1/1:14,0:14:41.91:344,42,0
chr10	74915376	.	A	AC	4568.52	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-10.877;DP=614;FS=9.065;HRun=7;HaplotypeScore=60.4640;InbreedingCoeff=0.9981;MQ=85.38;MQ0=0;MQRankSum=-2.513;QD=27.69;ReadPosRankSum=3.863;VQSLOD=5.3329;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,33:36:93.29:1123,93,0	0/0:7,0:7:18.03:0,18,174	0/0:23,0:23:57.07:0,57,543	0/0:28,0:27:59.06:0,59,490	0/0:18,0:18:51.08:0,51,492	0/0:17,0:17:48.07:0,48,463	0/0:19,0:19:57.09:0,57,550	0/0:30,0:30:69.09:0,69,666	1/1:4,23:27:57.17:689,57,0	0/0:17,0:17:45.07:0,45,434	0/0:28,0:28:72.11:0,72,692	1/1:2,19:21:44.98:543,45,0	1/1:5,20:25:48.01:577,48,0	0/0:18,0:18:51.08:0,51,492	0/0:30,0:30:87.14:0,87,840	0/0:20,1:21:26.87:0,27,543	0/0:32,0:32:93.15:0,93,898	0/0:15,0:15:45.07:0,45,435	0/0:17,0:17:33.04:0,33,318	0/0:20,0:20:51.08:0,51,492	0/0:27,0:27:78.11:0,78,748	1/1:2,14:16:42.13:507,42,0	1/1:2,15:17:42:506,42,0	1/1:3,20:23:28.20:623,28,0	0/0:23,0:23:66.08:0,66,627	0/0:20,0:20:57.08:0,57,545	0/0:25,0:25:66.09:0,66,633	0/0:14,0:14:42.07:0,42,406
chr10	74915734	.	A	AGCACTCATCTG	30819.69	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-11.007;DP=665;FS=2.751;HRun=0;HaplotypeScore=191.6247;InbreedingCoeff=0.9996;MQ=80.56;MQ0=0;MQRankSum=-18.516;QD=109.68;ReadPosRankSum=0.705;VQSLOD=5.2009;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,21:41:72.20:3956,72,0	0/0:11,0:11:33.11:0,33,1052	0/0:19,0:20:51.17:0,51,1561	0/0:25,0:25:61.61:0,62,1991	0/0:33,0:33:93.30:0,93,3186	0/0:20,0:20:60.19:0,60,1901	0/0:16,0:16:42.14:0,42,1428	0/0:27,0:27:72.24:0,72,2348	1/1:8,7:21:39.09:2010,39,0	1/1:10,12:25:72.25:3523,72,0	1/1:9,24:36:72.20:3861,72,0	1/1:3,12:19:45.13:2557,45,0	1/1:7,14:25:63.22:3512,63,0	0/0:23,0:23:63.17:0,63,1998	0/0:30,0:30:84.26:0,84,2872	1/1:1,14:17:45.15:2490,45,0	0/0:23,0:23:69.22:0,69,2294	0/0:20,0:20:57.20:0,57,1952	0/0:18,0:18:51.16:0,51,1634	0/0:22,0:22:66.23:0,66,2286	0/0:35,0:35:96.33:0,96,3259	1/1:12,11:29:39.13:2219,39,0	1/1:6,12:18:39.13:2131,39,0	1/1:7,10:21:23.66:1368,24,0	1/1:8,18:28:57.20:3192,57,0	0/0:28,0:28:75.26:0,75,2647	0/0:21,0:21:54.18:0,54,1906	0/0:12,0:12:36.12:0,36,1243
chr10	74916503	.	CG	C	784.64	PASS	AB=0.935;AC=28;AF=0.538;AN=52;BaseQRankSum=-0.593;DP=253;FS=31.533;HRun=11;HaplotypeScore=33.5630;InbreedingCoeff=0.2064;MQ=73.09;MQ0=15;MQRankSum=1.705;QD=4.90;ReadPosRankSum=2.447;VQSLOD=-0.2370;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,10:13:23.94:194,24,0	0/1:3,0:3:0.13:0,0,21	0/0:42,0:13:13.76:0,14,111	0/1:35,0:14:22.66:33,0,23	0/0:5,0:3:3.87:0,4,34	0/0:4,0:3:9.02:0,9,96	0/0:12,0:12:14.05:0,14,126	0/1:8,3:11:20.10:61,0,20	0/1:4,1:5:18.63:19,0,24	1/1:5,2:7:7.52:53,8,0	1/1:3,0:3:1.55:4,2,0	0/1:10,0:10:20.57:21,0,37	0/1:2,0:2:18.59:19,0,19	0/1:7,0:7:7.33:7,0,46	0/0:4,0:4:8.90:0,9,60	1/1:4,1:2:2.66:24,3,0	0/0:16,0:16:15.47:0,15,311	./.	0/1:7,1:8:9.71:19,0,10	0/0:6,0:6:0:0,0,0	1/1:0,3:4:8.03:55,8,0	./.	0/0:1,0:1:3.01:0,3,32	1/1:5,1:6:8.36:58,8,0	1/1:11,4:14:10.80:121,11,0	1/1:3,1:4:1.55:4,2,0	1/1:7,7:13:30.54:228,31,0	1/1:1,4:5:3:25,3,0
chr10	74916847	.	TA	T	1488.87	PASS	AB=0.958;AC=9;AF=0.161;AN=56;BaseQRankSum=9.268;DP=540;FS=3.007;HRun=9;HaplotypeScore=55.2823;InbreedingCoeff=0.8349;MQ=70.46;MQ0=0;MQRankSum=0.559;QD=15.51;ReadPosRankSum=1.672;VQSLOD=3.7985;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.15:0,54,612	0/0:11,0:11:33.10:0,33,381	0/0:19,0:17:19.60:0,20,260	0/1:22,1:20:9.12:9,0,215	0/0:43,0:43:99:0,111,1270	0/0:24,0:24:66.19:0,66,753	0/0:6,0:6:18.05:0,18,208	0/0:22,0:22:60.16:0,60,676	0/0:22,0:22:66.18:0,66,751	1/1:2,27:29:78.02:709,78,0	1/1:2,14:16:39.02:357,39,0	0/0:16,0:16:45.13:0,45,519	0/0:19,0:19:54.15:0,54,613	0/0:20,0:20:54.16:0,54,622	0/0:26,0:26:72.20:0,72,821	1/1:1,14:15:33.02:302,33,0	0/0:25,0:25:57.14:0,57,629	0/0:10,1:11:2.63:0,3,284	0/0:24,0:24:54.14:0,54,606	0/0:25,0:25:69.19:0,69,786	0/0:9,0:9:24.07:0,24,277	0/0:13,0:13:36.11:0,36,415	0/0:13,0:13:39.11:0,39,442	0/0:11,0:11:33.10:0,33,381	1/1:1,12:13:30.02:275,30,0	0/0:23,0:23:63.18:0,63,719	0/0:27,0:26:72.20:0,72,813	0/0:14,0:14:42.12:0,42,485
chr10	74917354	.	CA	C	2820.05	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.932;DP=605;FS=1.191;HRun=11;HaplotypeScore=82.6855;InbreedingCoeff=0.9703;MQ=70.56;MQ0=0;MQRankSum=-0.971;QD=17.30;ReadPosRankSum=4.221;VQSLOD=4.4722;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:17:6.96:264,7,0	0/0:6,0:6:18.05:0,18,192	0/0:11,0:11:21:0,21,197	0/0:9,0:8:12.91:0,13,125	0/0:45,0:48:99:0,126,1288	0/0:14,0:14:36.09:0,36,384	0/0:11,0:11:33.08:0,33,352	0/0:34,1:35:78.15:0,78,809	1/1:1,9:10:26.97:222,27,0	0/0:38,0:38:90.06:0,90,902	0/0:21,1:24:32.20:0,32,516	1/1:3,18:21:50.94:419,51,0	1/1:4,23:27:50.93:419,51,0	0/0:21,0:21:54.12:0,54,565	0/0:20,0:20:48.82:0,49,480	0/0:28,1:29:51.78:0,52,733	0/0:27,0:27:69.17:0,69,729	0/0:5,0:5:15.04:0,15,160	0/0:13,0:14:32.91:0,33,329	0/0:18,0:18:49.01:0,49,514	0/0:10,0:11:26.90:0,27,270	1/1:3,29:32:83.89:690,84,0	1/1:5,34:39:57.89:683,58,0	1/1:1,16:17:38.95:320,39,0	0/0:21,0:21:32.37:0,32,527	0/0:28,0:28:69.17:0,69,729	0/0:37,1:39:86.37:0,86,1072	0/0:12,1:13:14.46:0,14,359
chr10	74917627	.	AT	A	2720.34	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.614;DP=631;FS=13.544;HRun=2;HaplotypeScore=72.7375;InbreedingCoeff=0.9967;MQ=77.79;MQ0=1;MQRankSum=-0.853;QD=35.33;ReadPosRankSum=2.613;VQSLOD=3.1003;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,132,1902	0/0:6,0:6:18.06:0,18,270	0/0:28,0:25:53.02:0,53,948	0/0:25,0:24:66.19:0,66,932	0/0:31,0:30:90.29:0,90,1312	0/0:22,0:22:63.20:0,63,924	0/0:15,0:15:42.10:0,42,605	0/0:37,0:37:99:0,99,1438	0/0:10,0:10:27.09:0,27,404	1/1:0,27:27:81.26:1051,81,0	1/1:0,12:12:33.11:427,33,0	0/0:19,0:19:48.16:0,48,719	0/0:25,0:25:72.11:0,72,1079	0/0:15,0:15:45.15:0,45,674	0/0:23,0:23:69.23:0,69,1029	1/1:0,19:19:57.19:740,57,0	0/0:38,0:38:99:0,114,1667	0/0:9,0:9:24.08:0,24,359	0/0:25,0:25:75.25:0,75,1105	0/0:20,0:20:60.19:0,60,881	0/0:40,0:40:99:0,120,1792	0/0:13,0:13:39.09:0,39,559	0/0:24,0:24:63.20:0,63,924	0/0:22,0:22:63.21:0,63,944	1/1:0,19:19:51.17:662,51,0	0/0:26,0:26:78.26:0,78,1169	0/0:21,0:21:63.21:0,63,939	0/0:11,0:11:33.11:0,33,495
chr10	74917681	.	A	AATG	4952.13	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.100;DP=540;FS=9.093;HRun=0;HaplotypeScore=87.8772;InbreedingCoeff=0.9926;MQ=75.29;MQ0=0;MQRankSum=-5.200;QD=38.39;ReadPosRankSum=5.275;VQSLOD=5.6795;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,25:31:57.20:1220,57,0	0/0:5,0:5:15.04:0,15,215	0/0:18,0:18:46.94:0,47,695	0/0:15,0:15:26.01:0,26,448	0/0:43,0:43:99:0,114,1715	0/0:20,0:20:59.75:0,60,836	0/0:7,0:7:18.04:0,18,258	0/0:40,0:40:99:0,99,1307	1/1:2,10:13:18.06:379,18,0	0/0:22,0:22:52.89:0,53,490	0/0:18,0:18:51.06:0,51,511	1/1:2,10:14:24.08:512,24,0	1/1:3,10:14:24.08:512,24,0	0/0:15,0:15:42.10:0,42,592	0/0:18,0:18:54.15:0,54,783	0/0:16,0:16:48.07:0,48,463	0/0:35,0:35:90.20:0,90,1268	0/0:10,0:10:27.02:0,27,372	0/0:14,0:14:36.10:0,36,502	0/0:19,0:19:51.15:0,51,749	0/0:19,0:19:57.16:0,57,842	1/1:3,11:14:27.09:577,27,0	1/1:2,21:23:51.09:1045,51,0	1/1:6,14:20:32.85:707,33,0	0/0:20,0:20:51.03:0,51,476	0/0:28,0:28:75.22:0,75,1092	0/0:17,0:17:48.15:0,48,726	0/0:12,0:12:27.08:0,27,400
chr10	74918195	.	TA	T	1835.63	PASS	AB=0.878;AC=23;AF=0.411;AN=56;BaseQRankSum=8.423;DP=438;FS=0.435;HRun=13;HaplotypeScore=65.4600;InbreedingCoeff=0.7173;MQ=66.88;MQ0=0;MQRankSum=0.979;QD=10.37;ReadPosRankSum=4.771;VQSLOD=3.1651;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:23.20:0,23,129	0/1:4,1:5:9.89:10,0,76	0/0:15,0:10:0.79:0,1,90	0/1:13,1:9:9.02:9,0,72	0/0:20,0:20:54:0,54,501	0/0:10,0:12:14.23:0,14,169	0/0:17,0:17:51.07:0,51,490	0/0:27,0:27:50.59:0,51,454	1/1:1,12:13:36.27:263,36,0	1/1:4,13:17:29.76:216,30,0	1/1:3,15:19:10.61:217,11,0	1/1:2,9:11:29.74:212,30,0	1/1:4,10:14:32.77:239,33,0	0/0:19,0:19:44.82:0,45,400	0/0:22,0:22:47.68:0,48,432	1/1:3,11:14:20.08:206,20,0	0/0:22,1:23:42.07:0,42,408	0/0:15,2:16:9.73:0,10,256	0/1:21,4:26:3.03:3,0,409	0/0:10,1:11:11.03:0,11,249	0/0:4,0:4:6:0,6,54	1/1:0,1:1:2.98:22,3,0	1/1:3,9:12:26.82:196,27,0	1/1:2,4:6:11.91:86,12,0	1/1:4,21:25:50.45:362,50,0	0/0:20,1:21:25.95:0,26,386	0/0:25,0:25:49.92:0,50,617	0/0:11,0:11:23.98:0,24,218
chr10	74918239	.	AAAT	A	481.12	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.516;DP=415;FS=0.000;HRun=0;HaplotypeScore=75.5142;InbreedingCoeff=0.9509;MQ=64.40;MQ0=1;MQRankSum=-1.698;QD=8.02;ReadPosRankSum=-0.358;VQSLOD=2.4998;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,2:16:24.97:145,25,0	0/0:5,0:5:15.05:0,15,306	0/0:17,0:10:20.99:0,21,317	0/0:28,0:15:18.23:0,18,248	0/0:21,0:21:57.05:0,57,981	0/0:18,0:18:42.60:0,43,828	0/0:9,0:9:24.08:0,24,452	0/0:26,0:26:75.12:0,75,1305	1/1:10,0:10:24.70:109,25,0	0/0:10,0:10:24.06:0,24,459	0/0:18,0:18:48.10:0,48,919	1/1:10,0:10:24.69:134,25,0	1/1:13,0:13:19.16:98,19,0	0/0:12,0:12:30.10:0,30,605	0/0:19,0:19:49.94:0,50,885	0/0:11,0:11:33.11:0,33,651	0/0:28,0:28:84.28:0,84,1632	0/0:15,0:15:42.08:0,42,765	0/0:16,0:16:48.14:0,48,863	0/0:12,0:12:33.08:0,33,588	0/0:8,0:8:23.91:0,24,346	1/1:2,0:2:5.49:25,5,0	1/1:3,2:5:14.35:132,14,0	1/1:4,0:4:7.16:28,7,0	0/0:24,0:24:60.21:0,60,1196	0/0:23,0:23:66.22:0,66,1326	0/0:25,0:25:75.26:0,75,1495	0/0:10,0:9:30.08:0,30,561
chr10	74918240	.	AAT	A	1545.81	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.170;DP=412;FS=0.571;HRun=0;HaplotypeScore=62.9340;InbreedingCoeff=0.9560;MQ=63.14;MQ0=1;MQRankSum=-2.824;QD=27.60;ReadPosRankSum=-0.415;VQSLOD=4.4628;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:16:27.07:365,27,0	0/0:5,0:5:15.05:0,15,247	0/0:15,0:8:21.02:0,21,273	0/0:28,0:15:18.25:0,18,215	0/0:21,0:21:56.36:0,56,750	0/0:18,0:18:25.19:0,25,651	0/0:9,0:9:24.08:0,24,367	0/0:28,0:28:81.11:0,81,1132	1/1:1,9:10:27.09:382,27,0	0/0:10,0:10:24.05:0,24,376	0/0:19,0:19:51.09:0,51,772	1/1:5,5:10:30.06:359,30,0	1/1:1,9:10:21.04:281,21,0	0/0:12,0:12:30.10:0,30,483	0/0:19,0:19:41.14:0,41,719	0/0:11,0:11:33.11:0,33,534	0/0:28,0:28:84.27:0,84,1326	0/0:15,0:15:42.08:0,42,617	0/0:16,0:16:48.14:0,48,715	0/0:12,0:12:32.98:0,33,484	0/0:8,0:8:23.89:0,24,281	1/1:0,2:2:6.02:85,6,0	1/1:2,3:5:15.02:175,15,0	1/1:2,1:3:7.84:89,8,0	0/0:23,0:23:60.20:0,60,949	0/0:23,0:23:66.21:0,66,1070	0/0:26,0:26:78.24:0,78,1219	0/0:10,0:9:30.08:0,30,449
chr10	74918595	.	A	AAG	750.27	PASS	AB=0.962;AC=13;AF=0.232;AN=56;BaseQRankSum=6.415;DP=466;FS=7.757;HRun=0;HaplotypeScore=61.6815;InbreedingCoeff=0.0695;MQ=48.47;MQ0=30;MQRankSum=1.008;QD=5.56;ReadPosRankSum=0.173;VQSLOD=1.3650;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:20:36.98:177,0,37	0/0:6,0:6:12.38:0,12,94	0/0:50,0:8:3.09:0,3,13	0/0:44,0:6:7.20:0,7,63	0/0:17,0:17:35.02:0,35,260	0/0:31,0:31:44.76:0,45,397	0/0:5,0:5:5.96:0,6,45	0/0:23,0:23:42.30:0,42,362	0/1:13,2:14:33.55:139,0,34	0/1:15,0:13:44.78:45,0,66	0/1:27,0:24:28.15:158,0,28	0/1:10,1:11:6.56:91,0,7	1/1:6,0:6:0.10:32,0,0	0/0:11,0:10:28.19:0,28,236	0/0:15,0:15:40.93:0,41,317	0/1:12,0:11:35.83:42,0,36	0/0:24,0:24:56.46:0,56,435	0/0:11,0:11:19.99:0,20,135	0/0:19,0:18:35.34:0,35,307	0/0:17,0:17:36.02:0,36,282	0/0:5,0:5:11.89:0,12,91	0/1:6,0:6:17.11:33,0,17	1/1:8,1:9:6.22:142,6,0	0/1:5,1:5:0.17:29,0,0	0/1:6,0:5:12.52:13,0,13	0/0:25,0:21:50.68:0,51,409	0/0:17,0:17:46.29:0,46,384	0/0:10,0:8:17.98:0,18,170
chr10	74918605	.	A	AAG	1728.95	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=2.905;DP=475;FS=7.727;HRun=0;HaplotypeScore=58.0509;InbreedingCoeff=0.6005;MQ=52.47;MQ0=28;MQRankSum=-0.794;QD=13.40;ReadPosRankSum=3.433;VQSLOD=2.4720;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:19:34.78:258,35,0	0/0:8,0:8:14.67:0,15,146	0/0:58,0:10:10.85:0,11,108	0/0:50,0:7:12.03:0,12,129	0/0:16,0:16:38.78:0,39,479	0/0:28,0:28:47.87:0,48,539	0/0:3,0:3:3.01:0,3,36	0/0:28,0:27:65.29:0,65,682	0/1:14,0:13:3.58:142,0,4	1/1:4,8:12:21.39:327,21,0	1/1:8,18:24:18.85:596,19,0	0/1:9,0:9:16.35:50,0,16	1/1:6,0:6:7.30:85,7,0	0/0:11,0:10:29.63:0,30,319	0/0:18,0:18:50.52:0,51,457	1/1:4,9:13:7.97:147,8,0	0/0:23,0:23:61.90:0,62,744	0/0:12,0:12:25.55:0,26,313	0/0:21,0:20:46.37:0,46,656	0/0:15,0:15:32.98:0,33,420	0/0:7,0:7:18.06:0,18,266	0/1:7,0:7:14.86:90,0,15	1/1:8,0:8:15.18:157,15,0	0/1:6,0:5:1.51:2,0,11	0/1:6,0:6:4.09:61,0,4	0/0:22,0:19:53.89:0,54,659	0/0:18,0:18:47.71:0,48,679	0/0:8,0:7:18.04:0,18,231
chr10	74918606	.	A	AG	802.19	PASS	AB=0.843;AC=17;AF=0.304;AN=56;BaseQRankSum=6.628;DP=480;FS=6.772;HRun=0;HaplotypeScore=55.2866;InbreedingCoeff=0.4850;MQ=52.72;MQ0=28;MQRankSum=-1.079;QD=6.08;ReadPosRankSum=4.456;VQSLOD=2.3503;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,8:19:33.70:242,34,0	0/0:8,0:8:15.79:0,16,195	0/0:58,0:10:6.23:0,6,101	0/0:50,0:7:13.23:0,13,147	0/0:17,0:17:39.26:0,39,450	0/0:28,0:28:47.90:0,48,520	0/0:3,0:3:3.01:0,3,31	0/0:27,0:26:62.02:0,62,673	0/1:10,5:14:7.72:116,0,8	1/1:14,0:13:9.29:88,9,0	1/1:25,2:24:3.01:113,3,0	0/1:9,1:10:25.42:41,0,25	1/1:4,2:6:0.96:62,1,0	0/0:12,0:11:29.69:0,30,298	0/0:18,0:18:53.66:0,54,479	1/1:11,2:13:5.78:67,6,0	0/0:22,0:22:60:0,60,707	0/0:11,0:11:26.87:0,27,303	0/0:23,0:22:45.47:0,45,636	0/0:15,0:15:32.98:0,33,394	0/0:7,0:7:18.06:0,18,251	0/1:4,3:7:15.01:78,0,15	1/1:6,2:8:9.91:122,10,0	0/1:5,1:5:2.55:3,0,17	0/1:6,0:6:4.38:42,0,4	0/0:23,0:20:56.96:0,57,655	0/0:18,0:18:50.60:0,51,648	0/0:8,0:7:18.04:0,18,218
chr10	74918613	.	A	AAG	846.66	PASS	AB=1.000;AC=19;AF=0.352;AN=54;BaseQRankSum=7.120;DP=486;FS=0.598;HRun=0;HaplotypeScore=82.2536;InbreedingCoeff=0.7774;MQ=59.59;MQ0=26;MQRankSum=-1.922;QD=5.29;ReadPosRankSum=1.723;VQSLOD=2.5606;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,5:17:2.66:188,3,0	0/0:6,0:6:11.69:0,12,100	0/0:64,0:17:24.43:0,24,216	0/1:56,0:9:21.93:22,0,49	0/0:18,0:18:36.06:0,36,396	0/0:25,0:25:27.07:0,27,317	0/0:4,0:4:5.99:0,6,53	0/0:31,0:30:53.76:0,54,546	1/1:13,2:14:20.02:171,20,0	0/0:16,0:15:6.28:0,6,118	1/1:23,0:20:9.10:60,9,0	1/1:5,1:6:11.22:98,11,0	1/1:4,2:5:11.76:111,12,0	0/0:13,0:12:27.04:0,27,286	0/0:19,0:19:30.01:0,30,303	1/1:12,0:12:3.06:14,3,0	0/0:19,0:19:42.09:0,42,482	0/0:11,0:11:21.05:0,21,240	0/0:21,0:20:39.10:0,39,446	0/0:13,0:13:24.07:0,24,291	0/0:6,0:6:18.06:0,18,218	1/1:7,1:8:8.94:85,9,0	1/1:7,1:8:20.98:200,21,0	1/1:8,0:7:11.91:90,12,0	./.	0/0:26,0:24:47.84:0,48,502	0/0:21,0:21:54.07:0,54,592	0/0:5,0:5:9.03:0,9,109
chr10	74919352	.	GTT	G	5858.70	PASS	AB=0.609;AC=26;AF=0.464;AN=56;BaseQRankSum=4.570;DP=700;FS=2.336;HRun=13;HaplotypeScore=104.5113;InbreedingCoeff=0.7088;MQ=69.60;MQ0=13;MQRankSum=-0.777;QD=14.72;ReadPosRankSum=4.088;VQSLOD=4.1207;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,37:44:95.45:894,95,0	0/0:9,0:11:29.06:0,29,337	0/0:26,0:15:24.87:0,25,224	0/0:19,0:14:25.06:0,25,204	0/0:28,0:29:72.13:0,72,916	0/0:21,0:22:53.64:0,54,708	0/0:24,0:25:64.97:0,65,795	0/0:42,0:44:76.90:0,77,900	1/1:4,17:20:50.80:477,51,0	1/1:3,21:22:60.08:575,60,0	1/1:4,23:27:57.06:550,57,0	1/1:5,19:23:31.88:522,32,0	1/1:7,21:24:48:465,48,0	0/0:5,0:15:15.03:0,15,167	0/0:29,0:31:81.04:0,81,1085	1/1:8,14:19:38.98:378,39,0	0/0:32,0:33:87.27:0,87,1190	0/0:14,0:15:29.58:0,30,385	0/1:10,1:25:19.80:20,0,98	0/1:9,2:25:15.17:15,0,95	0/0:10,1:22:5.79:0,6,170	1/1:2,18:20:48.05:464,48,0	1/1:3,17:21:44.46:402,44,0	1/1:2,26:26:68.65:668,69,0	1/1:2,14:16:42.06:407,42,0	0/1:9,2:27:11.57:12,0,139	0/1:15,1:44:8.49:8,0,247	0/0:2,0:10:14.13:0,14,50
chr10	74921910	.	AT	A	1597.43	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=11.446;DP=425;FS=4.796;HRun=9;HaplotypeScore=47.2146;InbreedingCoeff=0.7947;MQ=63.04;MQ0=5;MQRankSum=2.080;QD=11.66;ReadPosRankSum=1.815;VQSLOD=2.4834;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:6.11:127,0,6	0/0:4,0:4:12.04:0,12,138	0/0:6,0:5:9.03:0,9,104	0/0:8,0:8:15.04:0,15,170	0/0:16,0:16:48.13:0,48,543	0/0:29,0:29:84.20:0,84,946	0/0:8,0:8:15.04:0,15,173	0/0:39,0:35:99:0,99,1108	1/1:9,0:9:2.48:69,2,0	1/1:5,15:20:45.01:412,45,0	1/1:2,19:22:50.05:445,50,0	1/1:14,0:14:10.54:104,11,0	1/1:7,0:7:13.58:60,14,0	0/0:17,0:17:39.12:0,39,450	0/0:16,0:16:41.99:0,42,485	1/1:5,4:9:8.99:82,9,0	0/0:23,0:22:51.14:0,51,579	0/0:13,0:13:36.11:0,36,415	0/0:16,0:14:42.11:0,42,475	0/0:20,0:20:51.11:0,51,574	0/0:7,0:7:21.05:0,21,233	1/1:1,0:1:2.74:12,3,0	0/1:11,0:11:2.41:69,0,2	1/1:6,0:6:17.12:88,17,0	1/1:1,16:17:36.02:329,36,0	0/0:26,1:27:41.74:0,42,726	0/0:22,0:22:63.19:0,63,724	0/0:17,0:16:39.12:0,39,450
chr10	74921919	.	TA	T	1709.66	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=7.535;DP=424;FS=3.264;HRun=3;HaplotypeScore=45.1936;InbreedingCoeff=0.7658;MQ=54.51;MQ0=12;MQRankSum=1.436;QD=18.19;ReadPosRankSum=1.522;VQSLOD=3.1586;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:20:42.09:501,42,0	0/0:5,0:5:14.98:0,15,181	0/0:4,0:3:9.03:0,9,122	0/0:5,0:5:12.04:0,12,163	0/0:20,0:20:51.08:0,51,651	0/0:34,0:34:87.11:0,87,1115	0/0:7,0:6:18.02:0,18,224	0/0:42,0:35:99:0,99,1272	1/1:0,7:7:21.07:258,21,0	0/1:16,0:16:15.22:29,0,15	0/0:22,0:22:12.45:0,12,60	1/1:1,10:11:30.09:368,30,0	1/1:0,7:7:15.05:184,15,0	0/0:16,0:16:39.13:0,39,530	0/0:22,0:21:50.93:0,51,622	0/0:6,0:6:7.18:0,7,34	0/0:20,0:19:51.11:0,51,668	0/0:15,0:14:39.02:0,39,503	0/0:18,0:16:48.07:0,48,595	0/0:20,0:20:59.98:0,60,742	0/0:8,0:7:18.04:0,18,228	1/1:0,1:1:3.01:37,3,0	1/1:0,8:8:24.08:295,24,0	1/1:0,6:6:18.06:222,18,0	0/1:18,0:18:8.10:8,0,25	0/0:24,0:24:60.87:0,61,853	0/0:23,0:23:69.02:0,69,833	0/0:18,0:16:39.13:0,39,525
chr10	74922601	.	GTT	G	2068.36	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=6.160;DP=648;FS=0.438;HRun=14;HaplotypeScore=82.5960;InbreedingCoeff=0.9712;MQ=68.29;MQ0=9;MQRankSum=1.193;QD=16.55;ReadPosRankSum=5.044;VQSLOD=3.0110;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:27:47.74:538,48,0	0/0:6,0:7:21.06:0,21,281	0/0:37,0:9:16.02:0,16,138	0/0:34,0:21:7.68:0,8,84	0/0:29,0:31:43.83:0,44,765	0/0:20,0:26:62.67:0,63,792	0/0:15,0:15:33.11:0,33,459	0/0:19,0:22:38.04:0,38,426	1/1:4,13:18:23.78:269,24,0	0/0:38,0:38:84.18:0,84,1089	0/0:32,0:35:89.22:0,89,1102	1/1:2,4:6:11.99:111,12,0	1/1:3,14:17:32.93:305,33,0	0/0:24,0:23:63.18:0,63,847	0/0:21,0:22:60.18:0,60,811	0/0:21,0:21:51.13:0,51,666	0/0:24,0:26:66.15:0,66,888	0/0:15,0:16:38.54:0,39,459	0/0:19,0:22:41.23:0,41,458	0/0:22,0:26:65.59:0,66,828	0/0:11,0:11:27.07:0,27,358	1/1:5,19:25:44.49:447,44,0	1/1:3,12:14:29.99:278,30,0	1/1:2,13:16:35.74:317,36,0	0/0:24,0:27:62.69:0,63,836	0/0:36,0:38:80.16:0,80,966	0/0:30,0:34:74.69:0,75,940	0/0:4,0:6:12.03:0,12,142
chr10	74923589	.	A	AAC	10333.59	PASS	AB=0.943;AC=23;AF=0.411;AN=56;BaseQRankSum=-13.911;DP=594;FS=3.367;HRun=0;HaplotypeScore=69.7968;InbreedingCoeff=0.9396;MQ=87.98;MQ0=2;MQRankSum=-0.030;QD=39.29;ReadPosRankSum=2.257;VQSLOD=7.0271;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,41:43:99:1975,108,0	0/0:6,0:6:18.06:0,18,258	0/0:24,0:24:65.98:0,66,882	0/0:19,0:19:54.11:0,54,727	0/0:18,0:18:51.13:0,51,707	0/0:23,0:23:69.23:0,69,981	0/0:14,0:14:39.12:0,39,539	0/0:28,0:28:75.23:0,75,1043	1/1:2,20:22:57.20:1044,57,0	1/1:2,20:23:63.21:1123,63,0	1/1:0,12:13:33.11:586,33,0	1/1:0,23:23:57.20:1044,57,0	1/1:1,13:14:36.12:659,36,0	0/0:15,0:15:42.08:0,42,543	0/0:22,0:22:66.22:0,66,945	1/1:2,22:22:51.13:935,51,0	0/0:27,0:27:75.22:0,75,1047	0/0:10,0:10:30.10:0,30,430	0/0:17,0:17:48.15:0,48,670	0/0:22,0:22:66.19:0,66,908	0/0:39,0:39:99:0,111,1570	1/1:1,11:12:33.11:600,33,0	1/1:0,17:17:45:822,45,0	1/1:1,19:20:45.15:824,45,0	1/1:2,17:19:39.13:715,39,0	0/1:31,2:33:5.19:5,0,1233	0/0:42,0:42:99:0,123,1698	0/0:5,0:5:15.05:0,15,214
chr10	74923705	.	CAGAT	C	7502.80	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=9.480;DP=358;FS=17.764;HRun=0;HaplotypeScore=76.1020;InbreedingCoeff=0.9640;MQ=79.98;MQ0=4;MQRankSum=-7.032;QD=43.12;ReadPosRankSum=3.681;VQSLOD=4.0383;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:51.09:924,51,0	0/0:3,0:3:9.03:0,9,236	0/0:23,0:16:42.14:0,42,994	0/0:24,0:21:46:0,46,1223	0/0:19,0:19:51.18:0,51,1335	0/0:13,0:13:36.12:0,36,937	0/0:19,0:19:51.18:0,51,1330	0/0:25,0:25:60.21:0,60,1494	1/1:2,7:9:20.68:381,21,0	1/1:1,9:10:27.09:483,27,0	1/1:2,5:7:12.04:218,12,0	1/1:1,8:9:21.07:374,21,0	1/1:1,7:8:18.06:327,18,0	0/0:10,0:10:27.08:0,27,653	0/0:18,0:18:42.14:0,42,984	1/1:2,9:11:24.08:436,24,0	0/0:23,0:22:66.23:0,66,1670	0/0:6,0:6:15.05:0,15,392	1/1:1,7:7:18.06:319,18,0	1/1:1,8:9:21.07:381,21,0	1/1:1,16:17:35.96:647,36,0	1/1:1,9:10:27.09:491,27,0	1/1:1,8:9:21.03:382,21,0	1/1:2,13:15:35.73:631,36,0	1/1:1,11:12:29.86:537,30,0	1/1:1,8:9:24.08:427,24,0	1/1:0,8:8:24.08:436,24,0	1/1:0,2:2:6.02:109,6,0
chr10	74924687	.	TA	T	4868.50	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.687;DP=644;FS=25.946;HRun=2;HaplotypeScore=67.4959;InbreedingCoeff=0.9992;MQ=80.50;MQ0=0;MQRankSum=-1.377;QD=34.29;ReadPosRankSum=1.289;VQSLOD=2.9349;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:87.28:1129,87,0	0/0:8,0:8:24.07:0,24,340	0/0:19,0:19:50.30:0,50,689	0/0:18,0:19:51.17:0,51,752	0/0:24,0:24:63.17:0,63,919	0/0:24,0:24:69.23:0,69,1016	0/0:23,0:23:69.23:0,69,1032	0/0:41,0:41:99:0,106,1680	1/1:0,24:24:66.21:857,66,0	0/0:27,0:27:75.25:0,75,1124	0/0:27,0:27:69.23:0,69,1014	1/1:0,10:10:24.08:312,24,0	1/1:0,20:20:57.19:740,57,0	0/0:17,0:17:51.17:0,51,763	0/0:21,0:21:60.18:0,60,848	0/0:21,0:21:48.16:0,48,719	0/0:31,0:31:93.32:0,93,1394	0/0:26,0:26:75.18:0,75,1056	0/0:22,0:22:66.22:0,66,984	0/0:23,0:23:63.20:0,63,924	0/0:26,0:26:78.26:0,78,1166	1/1:0,16:16:42.14:545,42,0	1/1:0,22:22:57.19:740,57,0	1/1:2,16:18:42.14:545,42,0	0/0:30,0:30:81.23:0,81,1189	0/0:28,0:28:81.26:0,81,1190	0/0:33,0:33:99:0,99,1484	0/0:12,0:12:36.12:0,36,539
chr10	74924710	.	C	CT	2191.21	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-8.501;DP=650;FS=3.957;HRun=10;HaplotypeScore=82.7843;InbreedingCoeff=0.9897;MQ=78.19;MQ0=1;MQRankSum=0.020;QD=22.13;ReadPosRankSum=-0.141;VQSLOD=4.3023;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:53.88:0,54,443	0/0:7,0:7:17.98:0,18,148	0/0:25,0:21:20.83:0,21,274	0/0:21,0:21:19.55:0,20,277	0/0:27,0:27:65.90:0,66,542	0/0:31,0:31:71.87:0,72,591	0/0:28,0:28:65.84:0,66,532	0/0:34,0:35:76.91:0,77,617	0/0:20,1:21:21.92:0,22,383	1/1:7,16:23:40.95:461,41,0	1/1:2,26:28:75.10:778,75,0	0/0:10,0:10:23.97:0,24,197	0/0:17,0:17:41.90:0,42,339	0/0:17,1:18:18.92:0,19,356	0/0:18,0:18:40.76:0,41,325	1/1:3,22:25:51.13:544,51,0	0/0:40,0:40:99:0,102,837	0/0:21,0:21:53.87:0,54,433	0/0:20,0:20:53.90:0,54,437	0/0:26,0:26:59.79:0,60,491	0/0:24,0:24:50.87:0,51,413	0/0:17,0:18:37.98:0,38,300	0/0:23,0:23:56.89:0,57,461	0/0:20,0:20:47.90:0,48,388	1/1:3,20:23:49.53:569,50,0	0/0:21,1:22:18.93:0,19,362	0/0:35,0:35:89.83:0,90,732	0/0:17,0:17:47.94:0,48,394
chr10	74925071	.	A	ACC	663.07	PASS	AB=0.893;AC=5;AF=0.093;AN=54;BaseQRankSum=2.432;DP=529;FS=7.325;HRun=0;HaplotypeScore=89.8173;InbreedingCoeff=-0.1113;MQ=37.16;MQ0=41;MQRankSum=2.180;QD=5.82;ReadPosRankSum=-2.227;VQSLOD=1.9593;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:55.18:0,55,683	0/0:9,0:9:24.03:0,24,280	0/0:14,0:1:3.01:0,3,33	./.	0/0:27,0:25:52.82:0,53,612	0/0:17,0:17:42.02:0,42,501	0/0:12,0:11:26.98:0,27,340	0/0:24,0:23:60.12:0,60,782	0/0:17,0:16:47.63:0,48,569	0/0:25,0:24:69.10:0,69,858	0/0:24,0:24:57.93:0,58,633	0/0:11,0:11:21.01:0,21,225	0/0:20,0:17:39.09:0,39,476	0/0:19,0:17:50.14:0,50,586	0/0:16,0:14:42.14:0,42,572	0/0:7,0:6:17.97:0,18,194	0/0:23,0:21:57.18:0,57,773	0/0:23,0:19:36.09:0,36,442	0/1:17,0:14:89.28:89,0,141	0/1:24,0:23:99:189,0,361	0/0:8,2:7:14.64:0,15,166	0/0:23,0:20:41.03:0,41,453	0/0:21,0:19:39.02:0,39,488	0/0:23,0:20:16.50:0,16,203	0/0:16,0:15:39.08:0,39,493	0/1:25,3:25:99:189,0,397	0/1:16,12:28:99:287,0,285	0/1:13,1:11:25.19:25,0,188
chr10	74925793	.	T	TGAG	22147.84	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-17.851;DP=697;FS=9.983;HRun=0;HaplotypeScore=96.9687;InbreedingCoeff=0.9987;MQ=79.85;MQ0=0;MQRankSum=-5.270;QD=52.86;ReadPosRankSum=4.839;VQSLOD=6.4948;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,36:40:84.29:1876,84,0	0/0:13,0:13:36.12:0,36,588	0/0:28,0:27:79.78:0,80,1217	0/0:21,0:21:51.07:0,51,728	0/0:28,0:28:69.24:0,69,1126	0/0:19,0:19:57.18:0,57,906	0/0:18,0:18:51.17:0,51,830	0/0:31,0:31:87.29:0,87,1399	1/1:1,22:23:57.20:1271,57,0	1/1:1,31:32:93.32:2078,93,0	1/1:1,22:23:60.21:1339,60,0	1/1:1,22:23:54.19:1198,54,0	1/1:2,16:20:50.84:1104,51,0	0/0:23,0:23:66.21:0,66,1047	0/0:20,0:20:54.18:0,54,882	1/1:2,28:30:78.27:1741,78,0	0/0:40,0:40:99:0,117,1880	0/0:37,0:37:93.22:0,93,1443	1/1:5,16:22:51.13:954,51,0	1/1:5,25:30:66.23:1473,66,0	1/1:1,30:31:69.23:1541,69,0	1/1:0,18:19:36.12:802,36,0	1/1:1,18:19:39.13:842,39,0	1/1:2,18:20:30.57:671,31,0	1/1:1,19:20:54.19:1205,54,0	1/1:3,27:30:87.30:1912,87,0	1/1:0,30:30:78.27:1740,78,0	1/1:0,6:6:18.06:402,18,0
chr10	74926823	.	A	AT	2678.54	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-8.664;DP=638;FS=7.040;HRun=2;HaplotypeScore=63.1644;InbreedingCoeff=0.9988;MQ=74.11;MQ0=0;MQRankSum=-0.953;QD=36.69;ReadPosRankSum=1.136;VQSLOD=4.1765;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,121,1434	0/0:7,0:7:21.07:0,21,260	0/0:19,0:19:47.55:0,48,528	0/0:32,0:31:64.35:0,64,902	0/0:26,0:26:56.64:0,57,823	0/0:19,0:19:54.16:0,54,658	0/0:22,0:22:66.21:0,66,818	0/0:43,0:43:99:0,114,1365	0/0:24,0:24:69.21:0,69,843	1/1:2,18:20:54.18:766,54,0	1/1:0,17:17:45.15:648,45,0	0/0:16,0:16:45.14:0,45,556	0/0:19,0:19:57.18:0,57,706	0/0:14,0:14:42.12:0,42,508	0/0:21,0:21:60.17:0,60,727	1/1:2,14:16:42.14:605,42,0	0/0:33,0:33:96.27:0,96,1163	0/0:30,0:30:90.24:0,90,1085	0/0:16,0:16:48.14:0,48,583	0/0:20,0:20:57.18:0,57,706	0/0:43,0:43:99:0,126,1528	0/0:16,0:16:48.14:0,48,580	0/0:22,0:22:63.16:0,63,754	0/0:24,0:24:72.13:0,72,860	1/1:1,19:20:57.19:821,57,0	0/0:25,0:25:75.23:0,75,918	0/0:15,0:15:42.13:0,42,520	0/0:16,0:16:48.13:0,48,580
chr10	74927253	.	AACAATATT	A	8738.26	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.667;DP=459;FS=5.062;HRun=0;HaplotypeScore=128.5073;InbreedingCoeff=0.9700;MQ=67.76;MQ0=0;MQRankSum=-13.721;QD=57.49;ReadPosRankSum=4.165;VQSLOD=4.7596;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,5:6:6.02:162,6,0	0/0:9,0:9:27.09:0,27,1048	0/0:10,0:10:29.69:0,30,1065	0/0:6,0:6:17.95:0,18,540	0/0:34,0:34:96.33:0,96,3943	0/0:24,0:24:69.24:0,69,2897	0/0:11,0:11:24.08:0,24,914	0/0:34,0:34:88.54:0,89,3226	1/1:3,6:9:21.07:568,21,0	1/1:2,19:21:54.19:1461,54,0	1/1:0,21:21:54.19:1434,54,0	1/1:0,5:5:15.05:397,15,0	1/1:2,10:12:24.08:650,24,0	0/0:10,0:10:24.08:0,24,918	0/0:14,0:14:36.12:0,36,1528	1/1:1,12:13:33.11:888,33,0	0/0:16,0:16:45.15:0,45,1808	0/0:22,0:22:63.22:0,63,2409	0/0:16,0:16:42.14:0,42,1559	0/0:24,0:24:63.19:0,63,2335	0/0:8,0:8:18.06:0,18,661	1/1:1,16:17:42.06:1001,42,0	1/1:3,15:18:27.01:726,27,0	1/1:1,8:9:9.03:237,9,0	1/1:2,19:21:45.15:1214,45,0	0/0:26,0:26:57.20:0,57,2378	0/0:31,0:31:90.31:0,90,3685	0/0:12,0:12:30.10:0,30,1193
chr10	74927430	.	TA	T	3100.97	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.767;DP=472;FS=19.261;HRun=2;HaplotypeScore=46.6719;InbreedingCoeff=0.9969;MQ=82.46;MQ0=0;MQRankSum=-2.536;QD=30.11;ReadPosRankSum=2.556;VQSLOD=1.9059;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:51.03:619,51,0	0/0:6,0:6:18.06:0,18,270	0/0:16,0:16:45.15:0,45,655	0/0:15,0:15:42:0,42,576	0/0:27,0:27:81.25:0,81,1171	0/0:22,0:22:66.21:0,66,968	0/0:13,0:13:36.10:0,36,501	0/0:26,0:26:75.20:0,75,1049	1/1:1,12:13:33.11:428,33,0	0/0:25,0:25:75.23:0,75,1068	0/0:17,0:17:51.16:0,51,744	1/1:0,10:11:27.09:347,27,0	1/1:0,9:9:27.09:350,27,0	0/0:14,0:14:36.06:0,36,475	0/0:21,0:21:63.19:0,63,906	0/0:12,0:12:36.12:0,36,533	0/0:16,0:16:48.16:0,48,718	0/0:7,0:7:21.07:0,21,315	0/0:17,0:17:51.17:0,51,747	0/0:23,0:23:63.21:0,63,943	0/0:14,0:14:42.14:0,42,629	1/1:0,8:8:24.08:311,24,0	1/1:0,19:19:42:544,42,0	1/1:0,20:20:54.18:700,54,0	0/0:12,0:12:36.11:0,36,514	0/0:19,0:19:57.19:0,57,853	0/0:34,0:34:99:0,102,1488	0/0:13,0:13:39.13:0,39,584
chr10	74928017	.	G	GGAGCTAGCTGGTGC	13194.03	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-3.644;DP=518;FS=0.477;HRun=0;HaplotypeScore=179.8555;InbreedingCoeff=0.9454;MQ=76.91;MQ0=0;MQRankSum=-12.007;QD=75.83;ReadPosRankSum=-1.418;VQSLOD=4.4766;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,6:31:21.07:1335,21,0	0/0:8,0:8:21.05:0,21,645	0/0:17,0:17:27.07:0,27,720	0/0:12,0:12:12.04:0,12,446	0/0:22,0:22:54.19:0,54,2136	0/0:20,0:20:51.17:0,51,1918	0/0:25,0:25:60.21:0,60,2019	0/0:27,0:27:54.17:0,54,1856	1/1:5,6:12:18.06:1222,18,0	1/1:11,6:20:42.14:2274,42,0	1/1:10,1:13:5.91:270,6,0	1/1:6,6:13:18.06:1085,18,0	1/1:5,5:11:24.08:1492,24,0	0/0:23,0:23:54.19:0,54,1973	0/0:19,0:19:45.14:0,45,1524	1/1:5,7:14:30.10:1916,30,0	0/0:36,0:36:84.27:0,84,3178	0/0:21,0:21:54.17:0,54,1983	0/0:18,0:18:48.15:0,48,1636	0/0:8,0:8:21.06:0,21,678	0/0:37,0:37:99:0,108,4059	1/1:9,2:13:24.08:1289,24,0	1/1:9,1:12:2.60:203,3,0	1/1:10,5:17:15.05:840,15,0	1/1:10,5:18:21.07:1269,21,0	0/0:17,0:17:42.14:0,42,1594	0/0:25,0:24:63.21:0,63,2341	0/0:9,0:9:27.09:0,27,851
chr10	74928313	.	CCTTCTA	C	10688.73	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.580;DP=515;FS=5.717;HRun=0;HaplotypeScore=136.5805;InbreedingCoeff=0.9790;MQ=72.46;MQ0=1;MQRankSum=-17.064;QD=69.41;ReadPosRankSum=1.605;VQSLOD=5.1326;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:63.22:1588,63,0	0/0:10,0:10:30.10:0,30,1129	0/0:18,0:17:41.79:0,42,1059	0/0:12,0:12:14.35:0,14,373	0/0:19,0:19:57.18:0,57,2045	0/0:20,0:20:60.21:0,60,2245	0/0:17,0:17:51.18:0,51,1906	0/0:27,0:27:75.26:0,75,2771	1/1:0,10:10:30.10:762,30,0	1/1:0,18:18:54.19:1344,54,0	1/1:0,10:10:27.09:662,27,0	1/1:0,18:18:51.18:1302,51,0	1/1:0,17:17:45.15:1146,45,0	0/0:32,0:32:96.33:0,96,3540	0/0:29,0:29:87.28:0,87,3085	1/1:0,21:21:57.20:1453,57,0	0/0:29,0:29:87.30:0,87,3206	0/0:10,0:10:30.10:0,30,1087	0/0:13,0:13:39.13:0,39,1427	0/0:30,0:30:90.30:0,90,3077	0/0:36,0:35:99:0,102,3758	1/1:0,13:13:36.12:918,36,0	1/1:0,11:11:30.10:765,30,0	1/1:0,5:5:6.02:139,6,0	1/1:0,8:8:24.08:608,24,0	0/0:22,0:22:66.23:0,66,2341	0/0:31,0:31:87.28:0,87,3132	0/0:6,0:6:14.48:0,14,547
chr10	74928918	.	CAAAAAAAAA	C	5695.99	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.272;DP=505;FS=8.811;HRun=18;HaplotypeScore=142.9335;InbreedingCoeff=0.9682;MQ=62.76;MQ0=0;MQRankSum=-9.894;QD=53.23;ReadPosRankSum=9.584;VQSLOD=1.7381;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:27:62.43:0,62,2106	0/0:7,0:9:24.08:0,24,934	0/0:25,0:12:26.82:0,27,687	0/0:11,0:6:9.48:0,9,222	0/0:23,0:33:75.23:0,75,2606	0/0:11,0:12:33.11:0,33,1318	0/0:11,0:15:39.13:0,39,1474	0/0:16,0:19:30.10:0,30,976	0/0:11,0:16:45.15:0,45,1510	0/0:24,0:22:42.13:0,42,1392	0/0:26,0:26:43.70:0,44,1544	0/0:14,0:14:33.11:0,33,1180	0/0:14,0:17:39.13:0,39,1391	0/0:18,0:19:42.14:0,42,1575	0/0:18,0:21:48.15:0,48,1703	0/0:27,0:27:66.23:0,66,2482	0/0:15,0:18:48.15:0,48,1645	0/0:6,0:7:15.05:0,15,583	1/1:5,11:16:32.82:743,33,0	1/1:2,20:22:54:1268,54,0	1/1:2,3:5:8.95:218,9,0	0/0:3,0:6:15.05:0,15,553	0/0:9,0:9:18.06:0,18,703	0/0:21,0:28:69.24:0,69,2529	0/0:14,0:15:36.12:0,36,1384	1/1:5,17:22:47.79:1110,48,0	1/1:2,28:31:72.12:1703,72,0	1/1:2,9:11:27.01:654,27,0
chr10	74929007	.	A	AG	7728.78	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-11.936;DP=528;FS=0.699;HRun=1;HaplotypeScore=53.3647;InbreedingCoeff=0.9952;MQ=86.64;MQ0=0;MQRankSum=-0.394;QD=41.11;ReadPosRankSum=2.759;VQSLOD=5.2979;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:84.11:1202,84,0	0/0:16,0:16:45.11:0,45,554	0/0:17,0:17:44.94:0,45,522	0/0:20,0:20:48.40:0,48,500	0/0:25,0:25:75.24:0,75,973	0/0:23,0:23:66.17:0,66,838	0/0:27,0:27:81.24:0,81,1025	0/0:21,0:21:54.12:0,54,651	1/1:0,14:14:36.12:539,36,0	1/1:0,13:13:39.05:550,39,0	1/1:1,27:28:81.27:1211,81,0	1/1:1,11:12:30.10:450,30,0	1/1:0,19:19:54.18:806,54,0	0/0:18,0:18:51.14:0,51,633	0/0:17,0:17:48.16:0,48,623	1/1:1,10:11:27.09:405,27,0	0/0:19,0:19:57.17:0,57,726	0/0:15,0:15:45.15:0,45,584	0/0:15,0:15:42.14:0,42,544	0/0:23,0:23:60.20:0,60,779	0/0:15,0:15:45.10:0,45,565	1/1:0,13:13:33.11:494,33,0	1/1:0,16:16:48.16:711,48,0	1/1:0,19:19:57.12:827,57,0	1/1:1,12:13:36.12:535,36,0	0/0:28,1:29:39.31:0,39,1006	0/0:35,0:35:99:0,99,1211	0/0:5,0:5:12:0,12,137
chr10	74929171	.	G	GA	2839.64	PASS	AB=0.923;AC=16;AF=0.286;AN=56;BaseQRankSum=-10.865;DP=498;FS=11.161;HRun=8;HaplotypeScore=43.6792;InbreedingCoeff=0.7896;MQ=66.19;MQ0=0;MQRankSum=0.727;QD=22.90;ReadPosRankSum=0.428;VQSLOD=3.3196;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:75.22:866,75,0	0/0:12,0:12:33:0,33,298	0/0:5,0:2:3.37:0,3,17	0/1:7,0:6:8.87:9,0,21	0/0:42,0:42:99:0,117,1066	0/0:9,0:9:21:0,21,192	0/0:10,0:10:27.01:0,27,247	0/0:27,0:27:63.01:0,63,572	1/1:2,13:15:33.10:381,33,0	0/0:18,0:18:42.01:0,42,384	0/0:20,0:20:53.99:0,54,484	1/1:2,10:12:27.08:312,27,0	1/1:0,16:16:42.12:485,42,0	0/0:23,0:23:63.02:0,63,576	0/0:20,0:20:51.02:0,51,467	0/0:15,1:16:10.41:0,10,350	0/0:19,0:19:51.03:0,51,467	0/0:15,0:15:41.99:0,42,377	0/1:9,2:11:23.37:23,0,214	0/0:25,0:25:69.03:0,69,632	0/0:3,0:3:9:0,9,82	1/1:2,8:10:18.05:208,18,0	1/1:1,18:19:51.15:588,51,0	1/1:1,5:6:15.04:167,15,0	0/0:26,0:26:69.03:0,69,631	0/0:37,0:37:82.58:0,83,936	0/0:31,1:32:52.45:0,52,730	0/0:15,0:15:39:0,39,352
chr10	74930016	.	ACAGCTGTCTTCGACTC	A	4776.78	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.596;DP=405;FS=71.578;HRun=0;HaplotypeScore=177.9804;InbreedingCoeff=0.8876;MQ=68.50;MQ0=0;MQRankSum=-9.337;QD=82.36;ReadPosRankSum=1.048;VQSLOD=1.7284;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,8:11:14.97:462,15,0	0/0:3,0:3:9.03:0,9,711	0/0:18,0:18:48.15:0,48,2355	0/0:19,0:19:22.11:0,22,1641	0/0:15,0:15:45.15:0,45,2681	0/0:17,0:17:36.12:0,36,2484	0/0:31,0:31:90.31:0,90,6168	0/0:25,0:23:54.19:0,54,3179	1/1:1,11:12:30.10:1407,30,0	0/0:10,0:10:30.10:0,30,1568	0/0:3,0:3:6.02:0,6,420	1/1:3,6:9:18.06:779,18,0	1/1:2,9:12:21.07:983,21,0	0/0:18,0:18:51.18:0,51,3434	0/0:20,0:20:60.21:0,60,4493	0/0:24,0:24:69.71:0,70,4128	0/0:28,0:28:78.27:0,78,5491	0/0:10,0:10:30.09:0,30,2094	0/0:18,0:18:48.16:0,48,3050	0/0:13,0:13:39.13:0,39,2476	0/0:19,0:19:48.02:0,48,3039	1/1:2,3:5:8.99:301,9,0	1/1:0,6:6:15.05:703,15,0	1/1:1,2:3:3.01:141,3,0	0/0:9,0:9:24.08:0,24,1528	0/0:21,0:21:60.21:0,60,4590	0/0:23,0:23:66.23:0,66,4816	0/0:2,0:2:3.01:0,3,237
chr10	74931120	.	CCAA	C	349.24	PASS	AB=0.992;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.427;DP=414;FS=1.623;HRun=0;HaplotypeScore=95.1889;InbreedingCoeff=-0.1493;MQ=56.91;MQ0=31;MQRankSum=0.409;QD=1.34;ReadPosRankSum=-2.179;VQSLOD=1.7348;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,3:23:15.19:194,0,15	0/0:2,0:2:5.88:0,6,42	0/1:51,0:13:20.84:21,0,65	0/1:44,0:9:6.60:7,0,18	0/1:7,0:7:6.81:7,0,23	0/0:16,0:15:24.42:0,24,249	0/0:7,0:6:2.02:0,2,20	0/1:27,0:20:6.89:7,0,262	1/1:7,1:7:13.36:73,13,0	0/0:22,0:19:37.52:0,38,269	0/0:13,0:11:17.08:0,17,135	0/1:14,0:11:14.47:14,0,20	0/1:7,0:6:4.76:19,0,5	0/0:3,0:3:2.48:0,2,10	0/0:10,0:9:8.69:0,9,123	0/0:6,0:6:6.74:0,7,90	0/0:17,0:16:6.69:0,7,136	0/1:13,0:11:31.88:32,0,82	0/1:31,0:26:15.35:15,0,279	0/0:14,0:14:19.43:0,19,195	0/1:6,0:6:8.89:9,0,41	0/1:8,0:8:4.72:59,0,5	0/1:6,0:6:8.92:9,0,12	0/1:12,0:11:19.33:33,0,19	0/0:12,0:11:20.92:0,21,181	0/0:15,0:14:6.28:0,6,212	0/0:8,0:8:17.83:0,18,138	0/0:8,0:6:4.25:0,4,93
chr10	74931127	.	A	AC	1312.88	PASS	AB=0.986;AC=26;AF=0.464;AN=56;BaseQRankSum=7.035;DP=458;FS=32.435;HRun=0;HaplotypeScore=96.7867;InbreedingCoeff=0.3726;MQ=49.22;MQ0=33;MQRankSum=4.255;QD=5.32;ReadPosRankSum=7.726;VQSLOD=1.5455;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:24:36.18:139,36,0	0/0:4,0:4:10.73:0,11,69	0/0:51,0:10:1.61:0,2,55	0/0:45,0:9:15.24:0,15,73	0/0:7,0:7:5.96:0,6,47	0/0:17,0:16:34.92:0,35,252	0/0:7,0:6:9.28:0,9,56	0/0:31,0:24:63.88:0,64,448	0/1:10,0:9:12.84:13,0,24	1/1:5,16:19:16.25:321,16,0	1/1:3,12:13:19.49:168,19,0	0/1:16,0:13:19.95:21,0,20	0/1:9,0:8:12.93:13,0,33	0/0:4,0:4:5.92:0,6,27	0/0:10,0:9:20.44:0,20,161	1/1:0,7:7:10.26:92,10,0	0/0:18,0:17:27.95:0,28,158	0/0:17,0:15:33.22:0,33,255	0/1:38,0:32:39.60:151,0,40	0/1:14,2:16:0.92:89,0,1	1/1:7,0:7:5.25:31,5,0	0/1:8,0:8:19:25,0,19	0/1:8,0:8:4.41:40,0,4	1/1:13,0:12:9.27:62,9,0	1/1:1,13:13:21.04:207,21,0	1/1:18,1:17:4.29:104,4,0	0/1:9,0:9:0.54:1,0,45	1/1:9,0:7:3.85:23,4,0
chr10	74931478	.	C	CCT	13590.31	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-14.462;DP=698;FS=0.932;HRun=0;HaplotypeScore=77.7759;InbreedingCoeff=0.9996;MQ=84.90;MQ0=0;MQRankSum=-3.760;QD=49.96;ReadPosRankSum=2.248;VQSLOD=6.0543;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:99:1966,105,0	0/0:8,0:8:24.06:0,24,333	0/0:17,0:17:45.15:0,45,653	0/0:29,0:28:55.81:0,56,849	0/0:23,0:22:60.20:0,60,882	0/0:19,0:19:57.18:0,57,820	0/0:36,0:36:99:0,102,1398	0/0:24,0:23:60.18:0,60,842	1/1:1,21:22:66.23:1232,66,0	1/1:2,22:26:75.22:1330,75,0	1/1:1,18:19:51.17:954,51,0	1/1:2,27:29:72.25:1346,72,0	1/1:1,24:26:69.19:1256,69,0	0/0:26,0:26:75.25:0,75,1101	0/0:37,0:36:99:0,108,1569	1/1:0,27:27:78.27:1461,78,0	0/0:30,0:30:87.25:0,87,1231	0/0:23,0:23:63.21:0,63,928	0/0:17,0:17:45.14:0,45,639	0/0:17,0:15:36.11:0,36,510	0/0:61,0:61:99:0,184,2691	1/1:0,16:17:45.15:842,45,0	1/1:0,15:15:33.11:618,33,0	1/1:0,23:23:60.21:1124,60,0	1/1:0,29:29:78.27:1460,78,0	0/0:21,0:21:63.21:0,63,928	0/0:27,0:27:78.26:0,78,1144	0/0:11,0:11:33.11:0,33,486
chr10	74932325	.	A	ATT	9897.34	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-13.656;DP=540;FS=18.475;HRun=2;HaplotypeScore=59.7441;InbreedingCoeff=0.9937;MQ=75.81;MQ0=4;MQRankSum=-1.717;QD=47.36;ReadPosRankSum=2.777;VQSLOD=3.3961;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:23:48.16:924,48,0	0/0:4,0:4:12.03:0,12,163	0/0:16,0:16:38.77:0,39,557	0/0:7,0:7:16.86:0,17,207	0/0:23,0:23:66.21:0,66,984	0/0:27,0:27:81.27:0,81,1231	0/0:13,0:13:39.13:0,39,592	0/0:29,0:29:87.27:0,87,1269	1/1:2,25:28:72.25:1386,72,0	1/1:1,16:17:48.16:878,48,0	1/1:1,18:19:54.10:966,54,0	1/1:1,21:20:54.19:1033,54,0	1/1:1,24:24:54.16:1043,54,0	0/0:19,0:19:54.15:0,54,780	0/0:22,0:22:63.20:0,63,939	1/1:1,18:19:54.16:1008,54,0	0/0:13,0:13:39.13:0,39,595	0/0:17,0:17:51.15:0,51,748	0/0:20,0:20:54.09:0,54,720	0/0:18,0:18:51.17:0,51,781	0/0:26,0:26:78.24:0,78,1167	1/1:0,15:15:39.13:753,39,0	1/1:0,12:12:30.10:575,30,0	1/1:0,10:11:24.08:463,24,0	1/1:0,17:17:45.15:867,45,0	0/0:30,0:30:81.27:0,81,1236	0/0:32,0:30:96.29:0,96,1417	0/0:15,0:15:45.14:0,45,666
chr10	74932587	.	ATT	A	1007.93	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.990;DP=472;FS=21.540;HRun=13;HaplotypeScore=69.1991;InbreedingCoeff=0.9524;MQ=69.79;MQ0=2;MQRankSum=-5.168;QD=17.08;ReadPosRankSum=3.314;VQSLOD=0.8885;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:22:47.89:0,48,580	0/0:5,0:5:9.03:0,9,130	0/0:22,0:9:17.86:0,18,207	0/0:22,0:10:8.98:0,9,89	0/0:29,0:31:73.90:0,74,970	0/0:23,0:23:62.24:0,62,855	0/0:9,0:9:21.05:0,21,282	0/0:26,0:29:65.67:0,66,854	0/0:16,0:16:36.09:0,36,498	1/1:3,11:16:29.67:274,30,0	1/1:5,9:14:23.99:233,24,0	0/0:13,0:15:31.60:0,32,369	0/0:8,0:8:18.01:0,18,219	0/0:11,0:11:26.56:0,27,332	0/0:21,0:21:45.08:0,45,589	1/1:2,15:17:45.05:436,45,0	0/0:11,0:11:30.09:0,30,416	0/0:12,0:14:35.60:0,36,468	0/0:13,0:14:32.55:0,33,384	0/0:22,0:23:57.14:0,57,779	0/0:11,0:12:32.60:0,33,443	0/0:9,0:9:18.02:0,18,237	0/0:15,0:15:30.10:0,30,431	0/0:6,0:7:15.05:0,15,202	1/1:3,8:12:17.95:224,18,0	0/0:22,0:24:49.65:0,50,628	0/0:29,0:33:80.19:0,80,1002	0/0:16,0:16:39.13:0,39,565
chr10	74933255	.	G	GAGAA	3499.13	PASS	AB=0.941;AC=14;AF=0.250;AN=56;BaseQRankSum=-0.390;DP=616;FS=14.722;HRun=0;HaplotypeScore=108.6352;InbreedingCoeff=0.2328;MQ=59.85;MQ0=22;MQRankSum=3.534;QD=14.17;ReadPosRankSum=1.978;VQSLOD=2.0677;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:38:96.39:453,0,96	0/0:6,0:6:8.46:0,8,74	0/0:44,0:16:15.35:0,15,195	0/0:82,0:21:27.66:0,28,185	0/0:15,0:15:32.46:0,32,270	0/0:16,0:16:10.15:0,10,177	0/0:16,0:16:31.70:0,32,258	0/0:30,0:29:75.41:0,75,589	0/1:14,0:14:91.91:183,0,92	1/1:34,0:34:30.11:743,30,0	1/1:6,20:26:46.32:304,46,0	0/1:16,0:16:10.79:236,0,11	0/1:19,0:19:84.44:285,0,84	0/0:11,0:11:29.77:0,30,240	0/0:15,0:15:32.93:0,33,305	0/1:2,16:18:13.92:149,0,14	0/0:17,0:16:32.89:0,33,273	0/0:11,0:11:29.78:0,30,253	0/0:12,0:12:29.73:0,30,250	0/0:20,0:20:53.69:0,54,434	0/0:16,0:16:17.54:0,18,160	0/1:16,0:16:50.53:187,0,51	0/1:18,0:18:50.89:221,0,51	0/1:21,0:21:59.11:163,0,59	1/1:25,0:25:63.46:577,63,0	0/0:26,0:26:11.15:0,11,486	0/0:21,0:21:35.05:0,35,259	0/0:10,0:10:22.02:0,22,160
chr10	74936329	.	AC	A	3085.96	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.344;DP=690;FS=5.675;HRun=1;HaplotypeScore=67.1239;InbreedingCoeff=0.9984;MQ=97.66;MQ0=1;MQRankSum=-5.317;QD=37.63;ReadPosRankSum=1.108;VQSLOD=4.1953;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.31:0,90,1438	0/0:17,0:17:51.16:0,51,791	0/0:33,1:34:78.15:0,78,1452	0/0:36,0:36:99:0,105,1575	0/0:13,0:13:39.13:0,39,623	0/0:13,0:13:39.13:0,39,623	0/0:34,0:34:99:0,99,1542	0/0:34,0:34:99:0,102,1588	0/0:20,0:20:60.20:0,60,959	1/1:0,20:20:60.18:817,60,0	1/1:0,11:11:30.10:418,30,0	0/0:27,0:27:81.28:0,81,1293	0/0:25,0:25:75.21:0,75,1134	0/0:31,0:31:93.30:0,93,1458	0/0:43,0:43:99:0,129,2047	1/1:0,30:30:87.29:1214,87,0	0/0:32,0:32:93.30:0,93,1460	0/0:21,0:21:60.20:0,60,939	0/0:16,0:16:48.16:0,48,752	0/0:21,0:21:63.21:0,63,1004	0/0:38,0:38:99:0,111,1760	0/0:20,0:20:60.20:0,60,959	0/0:15,0:15:45.15:0,45,716	0/0:32,0:32:96.31:0,96,1508	1/1:0,21:21:57.19:797,57,0	0/0:24,0:24:72.25:0,72,1151	0/0:23,0:23:69.23:0,69,1091	0/0:7,0:7:20.10:0,20,293
chr10	74937286	.	C	CTCTTCT	1057.68	PASS	AC=18;AF=0.346;AN=52;BaseQRankSum=2.076;DP=366;FS=15.856;HRun=0;HaplotypeScore=92.5244;InbreedingCoeff=0.8182;MQ=71.60;MQ0=3;MQRankSum=-5.233;QD=16.79;ReadPosRankSum=0.461;VQSLOD=1.8164;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:9:11.64:74,12,0	0/0:3,0:3:9:0,9,157	0/0:30,0:13:20.79:0,21,374	0/0:16,0:10:24.68:0,25,378	0/0:32,0:32:93.26:0,93,1854	0/0:17,0:17:51.18:0,51,1144	0/0:11,0:11:27.09:0,27,606	0/0:33,0:33:69.24:0,69,1517	./.	1/1:5,5:10:18.06:527,18,0	1/1:4,4:7:6.02:202,6,0	1/1:4,0:5:2.60:10,3,0	1/1:7,0:10:8.59:49,9,0	0/0:3,0:3:9.03:0,9,202	0/0:8,0:8:21.07:0,21,470	1/1:3,0:3:3.01:101,3,0	0/0:30,0:30:78.24:0,78,1672	0/0:18,0:18:48.16:0,48,1057	0/0:16,0:15:36.12:0,36,730	0/0:15,0:15:36.12:0,36,764	0/0:4,0:4:9.03:0,9,156	1/1:6,0:7:5.48:32,5,0	1/1:1,0:3:5.86:35,6,0	./.	1/1:3,4:7:6.02:203,6,0	0/0:24,0:23:48.16:0,48,1007	0/0:22,0:22:45.60:0,46,894	0/0:16,0:16:45.15:0,45,935
chr10	74937294	.	CA	C	941.57	PASS	AB=0.900;AC=14;AF=0.259;AN=54;BaseQRankSum=3.207;DP=355;FS=6.785;HRun=14;HaplotypeScore=58.8289;InbreedingCoeff=0.6379;MQ=71.62;MQ0=5;MQRankSum=0.959;QD=9.32;ReadPosRankSum=2.707;VQSLOD=2.8234;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:9.65:0,10,44	0/1:3,1:4:11.47:11,0,47	0/0:35,0:12:6.46:0,6,50	0/0:19,0:12:18.84:0,19,143	0/0:29,1:32:38.47:0,38,510	0/0:22,0:22:51.03:0,51,462	0/0:9,0:9:12.01:0,12,112	0/0:30,1:32:36.29:0,36,457	0/0:5,0:5:12.61:0,13,59	0/1:5,0:5:0.05:0,0,3	0/0:5,0:4:0.94:0,1,1	0/0:5,0:5:8.59:0,9,45	0/0:6,0:6:7.58:0,8,36	0/0:4,0:4:2.98:0,3,22	0/0:11,0:11:26.84:0,27,226	0/0:0,0:1:0:0,0,0	0/0:27,3:30:54.45:0,54,627	0/0:20,0:20:21.44:0,21,331	1/1:8,8:16:22.75:149,23,0	1/1:4,10:14:26.73:185,27,0	1/1:0,3:3:2.90:20,3,0	0/0:3,0:3:3.06:0,3,8	0/0:2,0:2:2.92:0,3,17	./.	0/0:4,0:4:2.03:0,2,5	1/1:6,14:20:38.59:267,39,0	1/1:4,18:22:20.81:264,21,0	1/1:4,10:15:31.76:211,32,0
chr10	74937307	.	A	ATATATATAT	1415.82	PASS	AB=0.908;AC=14;AF=0.259;AN=54;BaseQRankSum=0.889;DP=346;FS=5.965;HRun=0;HaplotypeScore=110.0623;InbreedingCoeff=0.4765;MQ=69.83;MQ0=5;MQRankSum=-2.561;QD=21.45;ReadPosRankSum=-0.815;VQSLOD=2.4932;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,2:9:1.94:222,2,0	0/0:5,0:5:15.05:0,15,449	0/0:22,0:6:14.66:0,15,99	0/0:20,0:14:14.79:0,15,191	0/0:30,0:30:87.26:0,87,2232	0/0:25,0:24:69.19:0,69,1864	0/0:5,0:5:15.05:0,15,401	0/0:34,0:34:96.28:0,96,2139	1/1:1,3:6:8.81:537,9,0	1/1:4,0:5:6.51:148,7,0	1/1:5,0:4:2.83:120,3,0	0/1:3,0:4:11.29:114,0,11	0/1:4,1:5:2.51:134,0,3	0/0:4,0:4:9.02:0,9,215	0/0:12,0:12:30.08:0,30,789	0/0:1,0:1:0:0,0,0	0/0:33,0:33:90.18:0,90,2119	0/0:23,0:23:54.16:0,54,1567	0/1:13,0:12:13.22:13,0,393	0/1:14,0:14:1.84:2,0,667	0/0:3,0:3:3.01:0,3,72	0/0:2,0:2:3.06:0,3,8	0/0:1,0:1:1.25:0,1,3	./.	1/1:4,0:4:9.02:275,9,0	0/0:23,0:22:63.17:0,63,1515	0/0:24,0:24:32.34:0,32,1045	0/0:12,0:12:36.12:0,36,868
chr10	74937770	.	GCAGAGGCAGAGA	G	2730.04	PASS	AB=0.860;AC=17;AF=0.304;AN=56;BaseQRankSum=5.910;DP=481;FS=9.803;HRun=0;HaplotypeScore=142.8953;InbreedingCoeff=0.6414;MQ=53.28;MQ0=22;MQRankSum=-2.551;QD=21.84;ReadPosRankSum=-0.386;VQSLOD=1.6504;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:20.69:264,21,0	0/0:4,0:4:6.02:0,6,279	0/0:25,0:9:26.76:0,27,317	0/0:31,0:14:18.76:0,19,575	0/0:12,0:11:12.03:0,12,567	0/0:12,0:12:17.97:0,18,428	0/0:27,0:27:59.68:0,60,3028	0/0:20,0:17:42.01:0,42,909	1/1:9,5:14:36.10:960,36,0	0/0:13,0:13:18.05:0,18,657	1/1:5,0:5:2.17:15,2,0	1/1:10,5:15:30.04:671,30,0	1/1:6,4:10:9.03:326,9,0	0/0:14,0:14:36.10:0,36,1130	0/0:22,0:22:52.02:0,52,2288	0/1:14,0:14:74.90:75,0,597	0/0:30,0:30:81.18:0,81,3155	0/0:32,0:31:81.15:0,81,3374	0/0:17,0:12:25.23:0,25,855	0/0:14,0:13:24.03:0,24,798	0/0:35,0:35:75.19:0,75,3123	1/1:3,7:10:12.04:434,12,0	1/1:5,1:6:2.99:55,3,0	0/1:6,16:21:19.31:102,0,19	0/1:10,0:10:14.99:15,0,153	0/0:18,0:17:42.03:0,42,1094	0/0:14,0:14:33.06:0,33,1315	0/0:16,0:16:45.11:0,45,2084
chr10	74937782	.	A	AGAGG	129.08	PASS	AB=0.876;AC=4;AF=0.071;AN=56;BaseQRankSum=4.196;DP=414;FS=2.605;HRun=0;HaplotypeScore=81.7917;InbreedingCoeff=-0.1012;MQ=57.71;MQ0=14;MQRankSum=-2.265;QD=3.49;ReadPosRankSum=0.562;VQSLOD=1.7741;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:10:0.98:1,0,185	0/0:3,0:3:9.01:0,9,150	0/0:25,0:15:39.12:0,39,719	0/0:27,0:13:24.25:0,24,616	0/0:7,0:7:15.03:0,15,274	0/0:10,0:10:30.04:0,30,460	0/0:27,0:27:69.22:0,69,1373	0/0:24,0:22:63.16:0,63,1145	0/0:11,0:11:24.89:0,25,246	0/1:4,3:7:77.19:142,0,77	0/0:3,0:3:3.01:0,3,35	0/0:11,0:11:0.02:0,0,192	0/0:5,0:5:9:0,9,79	0/0:11,0:11:30.04:0,30,491	0/0:22,0:22:57.17:0,57,1107	0/1:12,1:13:16.74:17,0,298	0/0:28,0:28:76.89:0,77,1512	0/0:30,0:29:63.32:0,63,1627	0/0:16,0:13:38.08:0,38,570	0/0:9,0:8:18.06:0,18,358	0/0:36,0:36:90.23:0,90,1652	0/0:7,0:7:12:0,12,105	0/0:4,0:4:3.01:0,3,54	0/0:19,0:19:9.02:0,9,115	0/1:6,1:6:49.61:68,0,50	0/0:14,0:14:42.14:0,42,851	0/0:11,0:11:33.10:0,33,636	0/0:17,0:17:51.18:0,51,1054
chr10	74937874	.	AG	A	7082.38	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.434;DP=526;FS=3.931;HRun=2;HaplotypeScore=53.7099;InbreedingCoeff=0.9981;MQ=83.97;MQ0=0;MQRankSum=-1.612;QD=35.95;ReadPosRankSum=3.846;VQSLOD=5.3555;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:60.20:777,60,0	0/0:7,0:7:21.07:0,21,314	0/0:21,0:21:51.28:0,51,746	0/0:17,0:17:42.12:0,42,602	0/0:19,0:19:57.15:0,57,789	0/0:27,0:27:78.17:0,78,1100	0/0:16,0:16:48.16:0,48,717	0/0:34,0:34:99:0,99,1372	1/1:0,17:17:48.16:621,48,0	1/1:0,26:26:75.22:942,75,0	1/1:0,10:10:27.09:349,27,0	1/1:1,17:18:48.16:622,48,0	1/1:0,16:16:45.15:583,45,0	0/0:19,0:19:57.18:0,57,833	0/0:30,0:30:90.27:0,90,1288	1/1:0,14:14:39.13:505,39,0	0/0:23,0:23:69.23:0,69,1031	0/0:6,0:6:18.06:0,18,269	0/0:23,0:23:69.23:0,69,1030	0/0:15,0:15:45.13:0,45,633	0/0:19,0:19:57.14:0,57,774	1/1:0,14:14:42.14:544,42,0	1/1:1,17:18:48.16:622,48,0	1/1:0,19:19:54.18:699,54,0	1/1:0,23:23:63.20:817,63,0	0/0:24,0:24:72.23:0,72,1041	0/0:17,0:17:48.16:0,48,718	0/0:12,0:12:36.10:0,36,499
chr10	74938349	.	A	AAT	10938.30	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-6.529;DP=688;FS=7.029;HRun=0;HaplotypeScore=84.0051;InbreedingCoeff=0.9975;MQ=79.99;MQ0=2;MQRankSum=-3.900;QD=41.43;ReadPosRankSum=3.247;VQSLOD=6.2391;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,35:37:87.30:1544,87,0	0/0:11,0:11:33.08:0,33,433	0/0:28,0:28:60.13:0,60,807	0/0:15,0:15:42.12:0,42,546	0/0:32,0:32:93.31:0,93,1277	0/0:22,0:22:60.18:0,60,807	0/0:18,0:18:51.16:0,51,685	0/0:35,0:35:99:0,99,1345	1/1:2,19:21:42.14:745,42,0	1/1:9,16:24:60.20:1036,60,0	1/1:6,18:24:60.19:982,60,0	1/1:2,14:16:42.14:745,42,0	1/1:1,32:34:84.29:1490,84,0	0/0:19,0:19:54.18:0,54,742	0/0:37,0:37:99:0,102,1387	1/1:7,16:23:60.16:945,60,0	0/0:19,0:19:51.17:0,51,701	0/0:23,0:23:60.18:0,60,805	0/0:24,0:24:66.20:0,66,876	0/0:39,0:39:99:0,114,1516	0/0:37,0:37:99:0,105,1383	1/1:2,18:20:48.16:828,48,0	1/1:3,22:24:51.17:905,51,0	1/1:1,13:14:27.09:479,27,0	1/1:3,22:25:72.24:1239,72,0	0/0:34,0:34:46.37:0,46,1238	0/0:25,0:25:69.20:0,69,910	0/0:6,0:6:15.05:0,15,205
chr10	74938383	.	AAG	A	3617.49	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.697;DP=657;FS=3.089;HRun=0;HaplotypeScore=95.8741;InbreedingCoeff=0.9910;MQ=84.48;MQ0=1;MQRankSum=-8.484;QD=38.48;ReadPosRankSum=-0.494;VQSLOD=5.5433;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.31:0,90,1611	0/0:11,0:11:27.09:0,27,486	0/0:27,0:27:78.19:0,78,1284	0/0:14,0:14:42.14:0,42,735	0/0:35,0:35:99:0,102,1828	0/0:32,0:31:96.33:0,96,1709	0/0:20,0:20:51.16:0,51,880	0/0:37,0:37:99:0,108,1921	0/0:13,0:14:33.11:0,33,590	1/1:1,24:25:72.24:1008,72,0	1/1:2,22:24:69.21:948,69,0	0/0:14,0:14:42.14:0,42,756	0/0:25,0:25:66.22:0,66,1155	0/0:14,0:14:39.12:0,39,660	0/0:33,0:33:96.32:0,96,1691	1/1:2,22:24:63.20:865,63,0	0/0:15,0:15:42.14:0,42,752	0/0:20,0:20:57.20:0,57,1027	0/0:19,0:19:57.20:0,57,1009	0/0:54,0:54:99:0,157,2752	0/0:33,0:33:96.29:0,96,1695	0/0:22,0:22:57.20:0,57,1021	0/0:21,0:20:54.19:0,54,968	0/0:13,0:13:36.12:0,36,644	1/1:2,19:21:57.19:798,57,0	0/0:29,1:30:42.29:0,42,1404	0/0:24,0:24:66.21:0,66,1159	0/0:4,0:4:12.04:0,12,216
chr10	74938822	.	G	GA	6720.45	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=5.087;DP=709;FS=10.735;HRun=9;HaplotypeScore=90.7427;InbreedingCoeff=0.8853;MQ=74.47;MQ0=0;MQRankSum=-0.101;QD=22.55;ReadPosRankSum=2.196;VQSLOD=4.9749;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:23:22.08:472,22,0	0/0:12,0:12:32.99:0,33,286	0/1:17,0:16:3.88:4,0,5	0/1:16,0:15:17.45:17,0,38	0/0:44,1:45:80.74:0,81,925	0/0:28,0:28:68.95:0,69,599	0/0:22,0:22:56.95:0,57,491	0/0:31,0:31:74.95:0,75,648	1/1:1,22:23:60.13:651,60,0	1/1:9,21:30:64.42:699,64,0	1/1:3,21:27:68.85:726,69,0	1/1:6,15:21:22.07:463,22,0	1/1:2,19:21:51.14:562,51,0	0/0:32,0:32:83.96:0,84,723	0/0:27,0:27:38.74:0,39,562	1/1:7,24:31:66.18:730,66,0	0/0:26,0:26:74.98:0,75,651	0/0:19,0:19:47.97:0,48,416	0/0:23,0:23:59.96:0,60,518	0/0:42,0:42:99:0,105,912	0/0:19,0:19:53.99:0,54,469	1/1:4,16:20:45.12:497,45,0	1/1:6,21:27:34.31:605,34,0	1/1:0,19:19:54.15:597,54,0	1/1:1,22:23:63.17:697,63,0	0/0:36,2:38:32.63:0,33,738	0/0:33,0:33:80.96:0,81,700	0/0:14,0:14:35.99:0,36,312
chr10	74939620	.	C	CAAA	7028.28	PASS	AB=0.964;AC=23;AF=0.411;AN=56;BaseQRankSum=16.226;DP=633;FS=6.254;HRun=8;HaplotypeScore=123.0033;InbreedingCoeff=0.9325;MQ=65.92;MQ0=7;MQRankSum=-5.654;QD=26.13;ReadPosRankSum=1.230;VQSLOD=2.5282;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,21:32:61.45:1212,61,0	0/0:6,0:6:18.06:0,18,237	0/0:27,0:16:38.36:0,38,403	0/1:26,0:15:8.68:9,0,173	0/0:25,0:26:78.16:0,78,966	0/0:21,0:22:55.72:0,56,746	0/0:14,0:14:39.12:0,39,509	0/0:20,0:20:43.62:0,44,580	1/1:2,12:15:30.10:572,30,0	1/1:7,0:26:56.89:605,57,0	1/1:6,0:25:60.06:619,60,0	1/1:14,5:19:36.07:619,36,0	1/1:10,11:24:24.08:414,24,0	0/0:20,0:20:54.13:0,54,679	0/0:26,0:26:69.20:0,69,903	1/1:4,0:25:57.09:632,57,0	0/0:28,0:28:78.22:0,78,1008	0/0:15,0:14:22.88:0,23,384	0/0:25,0:24:57.14:0,57,721	0/0:27,0:27:69.19:0,69,905	0/0:23,0:23:66.20:0,66,851	1/1:10,14:27:53.21:934,53,0	1/1:3,13:17:36.08:667,36,0	1/1:6,8:15:21.96:390,22,0	1/1:3,0:14:33.08:356,33,0	0/0:31,0:30:78.23:0,78,1008	0/0:28,0:28:69.16:0,69,857	0/0:26,0:26:56.64:0,57,802
chr10	74939628	.	AC	A	2003.62	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=17.670;DP=595;FS=9.692;HRun=2;HaplotypeScore=112.2909;InbreedingCoeff=0.9981;MQ=73.41;MQ0=3;MQRankSum=-5.149;QD=9.50;ReadPosRankSum=0.460;VQSLOD=0.5823;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,2:27:57.89:264,58,0	0/0:6,0:6:18.06:0,18,255	0/0:26,0:20:41.29:0,41,512	0/0:27,0:17:32.29:0,32,359	0/0:27,0:27:72.06:0,72,1033	0/0:20,0:20:60.17:0,60,829	0/0:17,0:17:51.10:0,51,612	0/0:17,0:18:48.15:0,48,663	1/1:16,0:16:28.14:131,28,0	1/1:23,0:23:51.44:288,51,0	1/1:26,0:26:49.70:278,50,0	1/1:13,2:14:30.80:168,31,0	1/1:15,0:15:23.05:110,23,0	0/0:21,0:21:63.19:0,63,855	0/0:24,0:24:72.22:0,72,991	1/1:22,0:22:50.29:241,50,0	0/0:30,0:30:87.25:0,87,1175	0/0:14,0:13:36.10:0,36,486	0/0:21,0:21:60.18:0,60,814	0/0:27,0:27:81.22:0,81,1087	0/0:27,0:27:81.12:0,81,1042	1/1:22,1:23:43.34:242,43,0	1/1:15,1:16:33.37:165,33,0	1/1:13,2:15:29.94:194,30,0	1/1:13,0:12:31.25:150,31,0	0/0:31,0:31:90.25:0,90,1190	0/0:24,0:24:69.22:0,69,955	0/0:24,0:24:66.22:0,66,931
chr10	74939789	.	CCAAA	C	10427.77	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=17.203;DP=769;FS=1.781;HRun=0;HaplotypeScore=133.8838;InbreedingCoeff=0.9995;MQ=66.29;MQ0=2;MQRankSum=-4.892;QD=33.86;ReadPosRankSum=2.462;VQSLOD=5.0956;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,46:52:99:1761,105,0	0/0:18,0:18:51.13:0,51,1208	0/0:34,0:31:46.94:0,47,1191	0/0:21,0:18:41.47:0,41,746	0/0:23,0:23:63.22:0,63,1526	0/0:18,0:18:42.14:0,42,1039	0/0:28,0:28:68.82:0,69,1538	0/0:18,0:18:36.12:0,36,845	1/1:2,17:18:42.14:709,42,0	1/1:6,20:26:60.18:962,60,0	1/1:4,23:27:54.18:897,54,0	1/1:6,17:22:42.14:709,42,0	1/1:13,27:39:72.25:1215,72,0	0/0:34,0:34:81.28:0,81,1983	0/0:28,0:28:75.24:0,75,1816	1/1:3,28:29:75.26:1265,75,0	0/0:35,0:35:87.30:0,87,2101	0/0:33,0:32:81.28:0,81,2016	0/0:24,0:24:48.16:0,48,1154	0/0:25,0:25:47.97:0,48,1139	0/0:48,0:48:99:0,117,2888	1/1:3,14:17:42.14:695,42,0	1/1:3,17:19:34.36:590,34,0	1/1:7,31:38:28.30:1118,28,0	1/1:4,11:15:30.10:506,30,0	0/0:35,0:35:87.30:0,87,2105	0/0:29,0:29:66.23:0,66,1588	0/0:10,0:10:24.08:0,24,504
chr10	74941573	.	TAAAAAC	T	12355.16	PASS	AB=0.545;AC=33;AF=0.589;AN=56;BaseQRankSum=13.710;DP=595;FS=3.358;HRun=0;HaplotypeScore=151.5397;InbreedingCoeff=0.9256;MQ=68.46;MQ0=0;MQRankSum=-12.082;QD=35.50;ReadPosRankSum=2.935;VQSLOD=4.6824;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,16:30:51.17:1018,51,0	0/0:15,0:15:30.09:0,30,837	0/0:32,0:28:35.11:0,35,786	0/0:21,0:19:29.97:0,30,808	0/0:24,0:24:60.21:0,60,1730	0/0:26,0:26:60.19:0,60,1761	0/0:14,0:14:21.07:0,21,559	0/0:35,0:35:66.22:0,66,1864	1/1:12,12:24:54.17:989,54,0	1/1:7,19:26:48.16:990,48,0	1/1:6,15:21:33.03:590,33,0	1/1:9,8:17:27.09:522,27,0	1/1:6,11:17:42.14:839,42,0	0/0:21,0:21:51.18:0,51,1666	0/0:14,0:14:39.13:0,39,1171	1/1:6,14:20:33.11:686,33,0	0/0:26,0:26:57.20:0,57,1663	0/0:19,0:19:33.04:0,33,932	1/1:8,17:25:51.15:920,51,0	1/1:5,17:22:48.08:891,48,0	1/1:11,5:16:6.02:125,6,0	1/1:10,7:17:33.10:645,33,0	1/1:7,9:16:33:612,33,0	1/1:9,8:17:23.20:459,23,0	1/1:6,16:22:23.89:501,24,0	1/1:1,22:23:66.21:1319,66,0	1/1:8,21:29:51.13:1018,51,0	0/1:1,5:6:5.61:231,0,6
chr10	74941604	.	CA	C	3945.15	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.716;DP=656;FS=16.767;HRun=3;HaplotypeScore=140.1801;InbreedingCoeff=0.9991;MQ=65.51;MQ0=0;MQRankSum=-8.046;QD=30.12;ReadPosRankSum=1.394;VQSLOD=1.7712;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:68.80:817,69,0	0/0:12,0:12:36.09:0,36,497	0/0:31,0:26:72.85:0,73,978	0/0:25,0:20:53.38:0,53,717	0/0:32,0:32:93.30:0,93,1317	0/0:24,0:24:69.23:0,69,994	0/0:13,0:13:38.16:0,38,520	0/0:48,0:48:99:0,135,1860	1/1:2,17:19:50.81:578,51,0	0/0:33,0:33:98.04:0,98,1325	0/0:26,0:26:71.67:0,72,951	1/1:1,13:14:36.11:441,36,0	1/1:1,16:17:50.83:606,51,0	0/0:20,0:20:60.20:0,60,863	0/0:23,0:23:69.20:0,69,971	0/0:24,0:24:63.19:0,63,880	0/0:26,0:26:72.21:0,72,1015	0/0:18,0:18:45.06:0,45,648	0/0:23,0:23:66.18:0,66,895	0/0:29,0:29:79.46:0,79,1067	0/0:17,0:17:42.13:0,42,585	1/1:1,16:17:45.06:536,45,0	1/1:1,18:19:37.50:623,38,0	1/1:5,12:17:29.58:345,30,0	0/0:20,0:20:42.14:0,42,603	0/0:37,0:37:99:0,104,1466	0/0:36,0:36:96.30:0,96,1351	0/0:8,0:8:21.07:0,21,298
chr10	74941898	.	C	CA	3569.30	PASS	AB=0.700;AC=11;AF=0.196;AN=56;BaseQRankSum=-9.366;DP=679;FS=1.685;HRun=9;HaplotypeScore=71.5349;InbreedingCoeff=0.8577;MQ=73.86;MQ0=1;MQRankSum=-0.107;QD=23.48;ReadPosRankSum=-0.395;VQSLOD=4.2950;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,138,1226	0/0:8,0:8:16.22:0,16,153	0/0:15,0:15:6.14:0,6,189	0/0:13,0:13:17.96:0,18,152	0/0:16,0:16:44.99:0,45,390	0/0:16,0:16:47.98:0,48,414	0/0:19,0:19:50.95:0,51,434	0/0:26,0:27:67.93:0,68,568	0/0:22,0:22:53.95:0,54,466	0/0:29,1:30:29.81:0,30,488	0/0:18,1:19:28.18:0,28,371	0/0:27,0:27:74.97:0,75,651	0/0:25,0:25:56.94:0,57,488	0/0:33,0:34:86:0,86,735	0/0:40,0:40:99:0,105,908	0/0:38,1:40:67.76:0,68,797	0/0:33,0:33:86.93:0,87,750	0/0:6,0:6:11.99:0,12,104	1/1:5,14:21:21.78:434,22,0	1/1:3,26:29:75.05:777,75,0	1/1:8,32:40:93.21:1015,93,0	0/0:12,0:12:32.98:0,33,284	0/0:19,0:19:50.96:0,51,439	0/0:34,0:34:83.97:0,84,729	0/0:16,0:16:38.98:0,39,339	1/1:7,23:30:63.16:688,63,0	1/1:5,20:25:54.15:598,54,0	0/1:4,3:7:17.01:57,0,17
chr10	74942093	.	G	GA	4272.54	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-12.568;DP=607;FS=7.416;HRun=4;HaplotypeScore=55.2284;InbreedingCoeff=0.9962;MQ=79.90;MQ0=0;MQRankSum=-2.887;QD=41.08;ReadPosRankSum=3.648;VQSLOD=3.2658;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.29:0,90,1168	0/0:7,0:7:21.07:0,21,272	0/0:20,0:20:54.08:0,54,664	0/0:12,0:13:18.67:0,19,394	0/0:32,0:32:96.29:0,96,1218	0/0:13,0:13:39.13:0,39,506	0/0:14,0:14:42.14:0,42,545	0/0:44,0:44:99:0,129,1674	0/0:17,0:17:51.17:0,51,662	1/1:3,32:35:96.33:1439,96,0	1/1:0,25:25:72.24:1079,72,0	0/0:22,0:22:66.21:0,66,857	0/0:16,0:16:48.14:0,48,608	0/0:21,0:21:57.18:0,57,739	0/0:20,0:20:60.17:0,60,762	1/1:0,26:26:69.23:1034,69,0	0/0:19,0:19:51.13:0,51,640	0/0:19,0:19:57.19:0,57,740	0/0:17,0:17:48.16:0,48,623	0/0:29,0:29:87.27:0,87,1114	0/0:11,0:11:33.11:0,33,427	0/0:35,0:35:96.31:0,96,1246	0/0:22,0:22:66.21:0,66,857	0/0:12,0:12:36.12:0,36,467	1/1:0,18:17:48.16:720,48,0	0/0:32,0:32:93.30:0,93,1206	0/0:28,0:28:84.26:0,84,1077	0/0:8,0:8:24.08:0,24,311
chr10	74943105	.	GT	G	1740.25	PASS	AB=0.912;AC=30;AF=0.536;AN=56;BaseQRankSum=6.829;DP=403;FS=6.245;HRun=14;HaplotypeScore=60.4107;InbreedingCoeff=0.6711;MQ=71.17;MQ0=4;MQRankSum=0.707;QD=8.13;ReadPosRankSum=3.385;VQSLOD=2.7065;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,18:29:41.93:277,42,0	0/0:7,0:8:20.80:0,21,167	0/0:17,0:11:16.53:0,17,121	0/1:15,2:10:11.97:12,0,49	0/0:15,0:15:23.97:0,24,210	0/0:17,2:22:6.67:0,7,318	0/1:3,1:4:11.57:12,0,47	0/0:34,0:36:45.39:0,45,562	1/1:1,4:5:11.87:82,12,0	0/0:20,0:20:44.91:0,45,208	0/1:19,1:20:21.97:22,0,80	1/1:3,5:9:16.85:108,17,0	1/1:3,7:11:22.81:149,23,0	0/0:13,0:13:30.01:0,30,272	0/0:9,0:9:9:0,9,79	0/0:13,0:13:24.02:0,24,103	0/0:19,1:20:18.45:0,18,309	0/0:16,0:14:15.90:0,16,163	1/1:7,11:18:34.64:230,35,0	1/1:3,8:11:23.74:164,24,0	1/1:2,6:8:17.80:123,18,0	1/1:2,4:6:11.87:82,12,0	1/1:4,5:9:11.75:82,12,0	1/1:4,5:10:5.61:77,6,0	0/1:16,0:16:2.98:3,0,81	1/1:8,7:15:5:133,5,0	1/1:2,14:16:38.12:252,38,0	1/1:1,9:10:20.77:143,21,0
chr10	74943510	.	CAAAATTG	C	6112.91	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.055;DP=620;FS=0.000;HRun=0;HaplotypeScore=140.0385;InbreedingCoeff=0.9738;MQ=68.94;MQ0=0;MQRankSum=-14.172;QD=44.95;ReadPosRankSum=2.087;VQSLOD=4.6883;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,14:23:39:840,39,0	0/0:15,0:15:45.15:0,45,1628	0/0:12,0:12:21.05:0,21,604	0/0:8,0:8:15.05:0,15,488	0/0:33,0:33:90.31:0,90,3364	0/0:34,0:34:90.31:0,90,3369	0/0:11,0:11:30.10:0,30,1144	0/0:47,0:47:99:0,117,4083	1/1:2,12:14:39.13:950,39,0	0/0:27,0:27:78.27:0,78,2887	0/0:26,0:26:63.22:0,63,2344	1/1:4,20:24:45.15:1096,45,0	1/1:6,27:33:69.24:1680,69,0	0/0:29,0:29:75.26:0,75,2636	0/0:22,0:22:60.21:0,60,2209	0/0:12,0:12:27.09:0,27,954	0/0:19,0:19:54.19:0,54,1977	0/0:32,0:32:72.24:0,72,2652	0/0:16,0:16:39.13:0,39,1309	0/0:24,0:24:66.21:0,66,2274	0/0:13,0:13:33.11:0,33,1248	1/1:1,17:16:42.06:966,42,0	1/1:9,7:16:18.06:434,18,0	1/1:2,6:8:6:146,6,0	0/0:31,0:31:87.30:0,87,3145	0/0:31,0:31:84.28:0,84,3051	0/0:34,0:34:87.30:0,87,3143	0/0:8,0:8:18.06:0,18,676
chr10	74943907	.	AC	A	6381.16	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.466;DP=651;FS=4.431;HRun=2;HaplotypeScore=157.3110;InbreedingCoeff=0.9997;MQ=64.70;MQ0=0;MQRankSum=-0.496;QD=35.26;ReadPosRankSum=3.956;VQSLOD=4.1573;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,45:45:99:1669,129,0	0/0:11,0:11:33.11:0,33,490	0/0:30,0:30:84.73:0,85,1190	0/0:20,0:19:47.39:0,47,616	0/0:17,0:17:51.17:0,51,763	0/0:21,0:21:63.20:0,63,924	0/0:15,0:15:45.15:0,45,671	0/0:25,0:25:72.23:0,72,1042	1/1:0,24:24:66.21:857,66,0	0/0:26,0:26:78.26:0,78,1163	0/0:17,0:17:48.16:0,48,718	1/1:1,18:19:48.16:623,48,0	1/1:0,31:31:87.28:1129,87,0	0/0:22,0:22:66.21:0,66,968	0/0:27,0:27:81.27:0,81,1212	0/0:25,0:24:60.20:0,60,896	0/0:35,0:35:99:0,102,1507	0/0:19,0:19:57.19:0,57,852	0/0:24,0:23:69.23:0,69,1022	0/0:23,0:23:54.18:0,54,806	0/0:35,0:35:84.13:0,84,1257	1/1:1,14:15:36.12:467,36,0	1/1:1,18:19:54.18:701,54,0	1/1:1,26:27:72.23:935,72,0	0/0:21,0:21:63.19:0,63,919	0/0:32,0:31:96.32:0,96,1413	0/0:16,0:16:39.13:0,39,581	0/0:9,0:9:27.04:0,27,357
chr10	74943927	.	AG	A	4510.65	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.954;DP=648;FS=2.230;HRun=1;HaplotypeScore=164.0589;InbreedingCoeff=0.9965;MQ=60.96;MQ0=0;MQRankSum=-4.272;QD=36.67;ReadPosRankSum=0.806;VQSLOD=4.4737;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:99:0,111,1576	0/0:11,0:11:33.11:0,33,527	0/0:19,0:18:17.98:0,18,735	0/0:26,0:22:60.20:0,60,929	0/0:19,0:19:57.18:0,57,881	0/0:30,0:30:90.21:0,90,1317	0/0:17,0:17:51.14:0,51,768	0/0:30,0:30:87.25:0,87,1299	0/0:23,0:23:63.21:0,63,937	0/0:27,0:27:78.25:0,78,1133	0/0:13,0:13:36.06:0,36,453	0/0:15,0:15:45.14:0,45,649	0/0:31,0:31:84.12:0,84,1162	0/0:26,0:26:75.26:0,75,1196	0/0:27,0:27:81.21:0,81,1216	0/0:25,0:24:66.15:0,66,933	0/0:32,0:32:96.26:0,96,1504	0/0:21,0:21:60.19:0,60,935	1/1:0,21:21:60.17:817,60,0	1/1:0,18:18:54.09:710,54,0	1/1:1,33:34:83.78:1018,84,0	0/0:13,0:13:30.01:0,30,383	0/0:17,0:17:42.14:0,42,629	0/0:37,0:37:99:0,102,1455	0/0:22,0:22:62.98:0,63,831	1/1:0,25:25:75.25:1046,75,0	1/1:0,19:19:51.08:668,51,0	1/1:0,6:6:18.06:251,18,0
chr10	74944094	.	A	AAC	2598.39	PASS	AB=0.743;AC=8;AF=0.143;AN=56;BaseQRankSum=2.749;DP=593;FS=0.999;HRun=0;HaplotypeScore=128.6826;InbreedingCoeff=-0.1590;MQ=61.68;MQ0=8;MQRankSum=-5.705;QD=14.85;ReadPosRankSum=1.006;VQSLOD=3.8119;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,7:22:99:322,0,423	0/0:11,0:11:33.11:0,33,503	0/1:19,0:9:2.49:2,0,162	0/0:28,0:15:14.82:0,15,146	0/0:35,0:35:99:0,102,1514	0/0:23,0:23:65.01:0,65,931	0/0:13,0:13:39.13:0,39,596	0/0:26,0:25:59.03:0,59,852	0/1:13,8:21:99:523,0,219	0/0:27,0:26:75.08:0,75,995	0/0:17,0:17:48.15:0,48,710	0/1:14,3:17:99:181,0,342	0/1:11,13:24:99:328,0,423	0/0:15,0:15:45.15:0,45,689	0/0:18,0:18:51.16:0,51,759	0/0:19,0:18:41.70:0,42,514	0/0:34,2:36:72.61:0,73,1419	0/0:26,0:26:66.86:0,67,963	0/0:20,0:19:48.14:0,48,528	0/0:16,0:16:45.14:0,45,653	0/0:13,0:12:29.91:0,30,372	0/1:11,12:23:99:529,0,357	0/1:8,14:20:99:514,0,200	0/1:15,12:26:99:330,0,382	0/0:25,0:24:42.14:0,42,639	0/0:26,0:24:62.35:0,62,840	0/0:17,0:17:45.60:0,46,643	0/0:7,0:7:21.07:0,21,316
chr10	74944105	.	AAC	A	1823.47	PASS	AB=0.991;AC=21;AF=0.375;AN=56;BaseQRankSum=6.285;DP=584;FS=2.575;HRun=0;HaplotypeScore=128.5005;InbreedingCoeff=0.0339;MQ=64.77;MQ0=8;MQRankSum=-0.141;QD=5.53;ReadPosRankSum=-4.767;VQSLOD=1.6194;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:68.63:69,0,130	0/0:10,0:10:30.08:0,30,451	0/0:27,0:13:23.68:0,24,274	0/0:30,0:16:37.54:0,38,287	0/0:34,0:34:99:0,99,1479	0/0:24,0:24:66.14:0,66,998	0/0:13,0:13:39.11:0,39,575	0/0:28,0:27:45.23:0,45,947	0/1:18,0:18:36.02:36,0,103	1/1:23,3:25:63.06:481,63,0	1/1:15,0:15:8.83:125,9,0	0/1:16,0:16:51.74:52,0,70	0/1:19,0:19:5.02:5,0,164	0/0:16,0:16:48.15:0,48,737	0/0:17,0:17:51.10:0,51,705	1/1:20,0:19:19.84:243,20,0	0/0:33,0:33:61.44:0,61,1262	0/0:22,0:22:57.10:0,57,851	0/1:19,0:17:31.91:75,0,32	0/1:16,0:16:12.66:92,0,13	0/1:14,1:14:19.71:104,0,20	0/1:22,0:22:35.72:36,0,199	0/1:20,0:18:39.18:39,0,159	0/1:22,0:21:35.41:35,0,140	1/1:20,5:24:30.71:253,31,0	0/1:27,0:25:60.19:192,0,60	0/1:17,1:18:99:105,0,107	0/1:9,0:9:6.63:63,0,7
chr10	74944106	.	AC	A	4366.30	PASS	AB=0.977;AC=28;AF=0.500;AN=56;BaseQRankSum=9.857;DP=583;FS=9.255;HRun=1;HaplotypeScore=111.9305;InbreedingCoeff=0.5158;MQ=66.44;MQ0=8;MQRankSum=-1.953;QD=13.27;ReadPosRankSum=-2.421;VQSLOD=2.4728;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,1:23:42.75:192,0,43	0/0:10,0:10:30.07:0,30,353	0/0:29,0:15:0.43:0,0,162	0/0:27,1:16:5.35:0,5,179	0/0:34,0:34:99:0,102,1167	0/0:22,0:22:66.17:0,66,776	0/0:13,0:13:39.10:0,39,454	0/0:27,0:26:45.21:0,45,738	0/1:18,0:18:37.64:114,0,38	1/1:16,10:25:69.08:776,69,0	1/1:2,13:15:29.50:338,29,0	1/1:16,1:17:23.43:173,23,0	0/1:17,1:18:54.16:72,0,54	0/0:16,0:16:48.13:0,48,574	0/0:17,0:17:51.08:0,51,560	1/1:16,4:19:43.59:476,44,0	0/0:33,0:33:81.65:0,82,992	0/0:23,0:23:58.85:0,59,669	1/1:18,0:16:26.65:187,27,0	1/1:12,4:16:34.25:362,34,0	1/1:13,2:14:22.71:197,23,0	0/1:22,0:22:82.34:101,0,82	0/1:20,0:18:68.08:96,0,68	0/1:22,1:22:58.33:115,0,58	1/1:6,19:24:40.79:468,41,0	1/1:25,1:24:41:353,41,0	1/1:18,0:18:12.49:166,12,0	1/1:9,0:9:22.59:180,23,0
chr10	74944107	.	C	CAACAAAAA	4195.32	PASS	AB=0.986;AC=17;AF=0.304;AN=56;BaseQRankSum=7.899;DP=587;FS=0.000;HRun=0;HaplotypeScore=191.3187;InbreedingCoeff=0.2914;MQ=67.13;MQ0=8;MQRankSum=-4.161;QD=17.12;ReadPosRankSum=-5.381;VQSLOD=1.2497;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:24:48.79:830,49,0	0/0:9,0:9:27.09:0,27,625	0/1:29,0:15:11.70:12,0,302	0/0:31,0:17:0.35:0,0,271	0/0:34,0:34:99:0,99,2253	0/0:22,0:22:66.20:0,66,1570	0/0:13,0:13:36.11:0,36,882	0/0:28,0:27:41.74:0,42,1312	1/1:15,3:18:1.28:660,1,0	0/1:27,0:26:56.88:57,0,441	0/0:15,0:15:13.08:0,13,415	1/1:16,0:17:18.68:542,19,0	0/1:16,1:18:99:370,0,100	0/0:16,0:16:48.16:0,48,1214	0/0:17,0:17:48.12:0,48,1040	0/1:20,0:19:37.42:37,0,209	0/0:33,0:33:92.87:0,93,2028	0/0:23,0:23:39.20:0,39,1226	0/1:18,0:16:15.93:16,0,225	0/0:16,0:16:7.75:0,8,406	0/0:15,0:14:21.07:0,21,281	1/1:18,1:22:2.08:696,2,0	1/1:16,3:17:25.28:731,25,0	0/1:24,0:23:32.14:236,0,32	0/0:25,0:24:19.97:0,20,422	0/0:26,0:24:36:0,36,494	0/0:18,0:18:22.49:0,22,499	0/1:9,0:9:7.61:8,0,167
chr10	74944330	.	CT	C	5505.79	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.453;DP=655;FS=0.731;HRun=1;HaplotypeScore=68.7238;InbreedingCoeff=0.9858;MQ=73.19;MQ0=0;MQRankSum=-2.764;QD=35.99;ReadPosRankSum=4.496;VQSLOD=4.9590;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:81.27:1131,81,0	0/0:5,0:5:15.02:0,15,212	0/0:24,0:24:59.48:0,59,854	0/0:32,0:32:81.74:0,82,1208	0/0:29,0:29:84.29:0,84,1338	0/0:26,0:26:78.27:0,78,1241	0/0:23,0:23:69.22:0,69,1078	0/0:37,0:37:99:0,111,1732	1/1:0,20:20:51.17:712,51,0	0/0:21,0:21:60.20:0,60,959	0/0:13,0:13:36.12:0,36,573	1/1:2,30:32:41.93:1128,42,0	1/1:0,19:19:54.18:750,54,0	0/0:25,0:25:72.25:0,72,1150	0/0:29,0:29:84.27:0,84,1318	0/0:32,1:33:57.40:0,57,1446	0/0:28,0:28:81.23:0,81,1239	0/0:20,0:20:60.20:0,60,950	0/0:18,0:18:54.18:0,54,845	0/0:20,0:20:57.19:0,57,910	0/0:36,0:36:99:0,108,1670	1/1:0,10:10:20.90:282,21,0	1/1:0,15:15:36.11:479,36,0	1/1:3,23:26:75.21:1022,75,0	0/0:18,0:18:54.18:0,54,827	0/0:30,0:30:90.26:0,90,1406	0/0:32,0:32:96.30:0,96,1474	0/0:3,0:3:9.03:0,9,141
chr10	74944588	.	G	GA	1748.37	PASS	AB=0.917;AC=27;AF=0.500;AN=54;BaseQRankSum=9.659;DP=466;FS=4.490;HRun=11;HaplotypeScore=105.7401;InbreedingCoeff=0.3183;MQ=50.50;MQ0=6;MQRankSum=-7.435;QD=6.11;ReadPosRankSum=-4.545;VQSLOD=1.4192;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:7,22:30:50.89:488,51,0	0/0:4,0:4:2.96:0,3,21	0/1:15,0:5:3.36:3,0,7	0/0:30,0:8:4.73:0,5,24	0/0:20,0:20:9.69:0,10,154	0/1:21,1:22:13.80:14,0,237	0/0:16,1:18:4.28:0,4,200	0/0:21,0:21:21.98:0,22,241	1/1:5,5:10:16.58:156,17,0	0/0:17,1:17:8.85:0,9,249	0/1:12,0:12:2.61:3,0,72	1/1:4,10:14:9.02:91,9,0	1/1:11,5:15:23.55:197,24,0	0/1:13,1:14:42.88:43,0,75	0/0:16,0:15:31.07:0,31,230	0/1:12,1:13:1.68:2,0,98	0/0:25,0:24:50.69:0,51,390	0/0:25,0:25:44.74:0,45,348	0/1:20,0:19:27.45:40,0,27	1/1:16,0:17:15.72:113,16,0	1/1:6,0:7:6.46:50,6,0	0/1:7,3:10:31.56:65,0,32	0/1:3,2:5:14.21:52,0,14	1/1:3,13:14:21.04:213,21,0	0/1:21,0:23:35.28:35,0,189	1/1:17,0:25:25.50:233,26,0	1/1:15,0:16:24.90:134,25,0	./.
chr10	74944621	.	A	AG	1064.65	PASS	AB=0.916;AC=18;AF=0.321;AN=56;BaseQRankSum=6.785;DP=505;FS=18.833;HRun=0;HaplotypeScore=88.7669;InbreedingCoeff=0.2417;MQ=61.08;MQ0=10;MQRankSum=-5.397;QD=5.75;ReadPosRankSum=1.492;VQSLOD=1.6347;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:50.75:51,0,54	0/0:1,0:1:2.98:0,3,22	0/0:52,0:17:40.29:0,40,365	0/0:49,0:17:4.64:0,5,208	0/0:26,0:26:64.52:0,65,829	0/0:24,0:24:55.79:0,56,740	0/0:20,0:20:54.07:0,54,684	0/0:28,0:27:16.28:0,16,618	0/1:9,0:9:13.21:21,0,13	0/0:15,0:15:1.26:0,1,273	0/1:9,0:9:29.95:30,0,51	0/1:7,0:7:11.78:12,0,18	1/1:12,0:11:13.03:96,13,0	0/0:12,0:12:29.79:0,30,315	0/0:17,0:17:48.12:0,48,610	0/0:10,0:10:20.94:0,21,133	0/0:22,0:22:66.07:0,66,835	0/0:21,0:21:60.18:0,60,789	1/1:9,3:11:4.77:134,5,0	1/1:10,4:14:31.15:222,31,0	1/1:4,7:12:14.20:117,14,0	0/1:7,0:7:10.54:16,0,11	0/0:8,0:8:0.17:0,0,17	0/0:15,0:15:10.09:0,10,41	0/1:23,0:23:16.80:17,0,86	0/1:14,5:20:15.94:207,0,16	1/1:8,15:21:24.80:292,25,0	0/1:1,4:5:11.82:27,0,12
chr10	74944622	.	A	AGG	4242.03	PASS	AB=0.983;AC=32;AF=0.571;AN=56;BaseQRankSum=7.160;DP=503;FS=5.382;HRun=8;HaplotypeScore=86.4843;InbreedingCoeff=0.6900;MQ=61.36;MQ0=10;MQRankSum=-3.254;QD=16.32;ReadPosRankSum=2.424;VQSLOD=2.6561;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:31,2:33:57.33:453,57,0	0/0:1,0:1:3.01:0,3,33	0/0:52,0:17:27.82:0,28,323	0/0:47,0:16:17.78:0,18,231	0/0:26,0:26:57.33:0,57,581	0/0:24,0:24:48.99:0,49,672	0/0:20,0:20:54.13:0,54,591	0/1:26,1:26:18.50:19,0,358	1/1:9,0:10:24.32:188,24,0	1/1:11,4:15:1.44:169,1,0	1/1:3,3:10:15.05:200,15,0	0/1:8,0:8:3.11:88,0,3	1/1:10,2:11:23.73:264,24,0	0/0:12,0:12:23.96:0,24,244	0/0:18,0:18:45.07:0,45,488	1/1:3,7:10:15.05:236,15,0	0/0:22,0:22:57.12:0,57,624	0/0:20,0:20:39.06:0,39,434	1/1:5,1:9:21.05:270,21,0	1/1:9,0:13:30.54:352,31,0	1/1:11,1:12:15.04:190,15,0	1/1:4,1:6:11.65:98,12,0	0/1:8,0:8:3.27:76,0,3	1/1:15,0:15:23.49:143,23,0	1/1:2,17:24:51.17:752,51,0	1/1:16,1:19:33.07:399,33,0	1/1:19,2:20:32.81:320,33,0	0/1:5,0:5:12.32:26,0,12
chr10	74944783	.	AT	A	5564.52	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=12.594;DP=517;FS=9.082;HRun=10;HaplotypeScore=55.9582;InbreedingCoeff=0.8730;MQ=73.42;MQ0=0;MQRankSum=-0.370;QD=20.09;ReadPosRankSum=2.682;VQSLOD=5.6561;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,34:37:95.98:833,96,0	0/0:4,0:4:12.03:0,12,133	0/1:15,0:15:12.29:12,0,131	0/1:9,0:9:4.87:5,0,5	0/0:33,0:33:90.21:0,90,983	0/0:21,0:22:59.99:0,60,638	0/0:15,0:15:33.06:0,33,356	0/0:27,0:27:66.18:0,66,730	1/1:2,15:17:38.98:339,39,0	0/0:31,0:31:80.93:0,81,884	0/0:12,0:12:33.08:0,33,359	1/1:1,6:7:15:130,15,0	1/1:0,16:16:44.99:391,45,0	0/0:10,0:10:21.05:0,21,224	0/0:14,0:15:32.92:0,33,346	0/0:17,0:17:51.14:0,51,564	0/0:15,0:15:39.10:0,39,427	0/0:19,1:20:28.21:0,28,523	1/1:6,23:29:65.97:573,66,0	1/1:2,31:33:86.97:755,87,0	1/1:1,12:13:29.99:260,30,0	1/1:1,16:17:47.99:417,48,0	1/1:2,16:18:47.98:417,48,0	1/1:4,11:15:34.23:289,34,0	0/0:19,0:19:48.05:0,48,498	1/1:3,18:21:53.98:466,54,0	1/1:0,25:25:68.99:599,69,0	1/1:1,4:5:9:78,9,0
chr10	74945295	.	TCTTA	T	5573.14	PASS	AB=0.517;AC=11;AF=0.196;AN=56;BaseQRankSum=13.465;DP=604;FS=9.149;HRun=0;HaplotypeScore=100.3623;InbreedingCoeff=0.8574;MQ=89.45;MQ0=0;MQRankSum=-0.949;QD=48.46;ReadPosRankSum=1.212;VQSLOD=5.6170;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,2599	0/0:7,0:7:21.04:0,21,515	0/0:20,0:20:43.51:0,44,1303	0/0:25,0:26:69.14:0,69,1487	0/0:30,0:30:90.30:0,90,2370	0/0:23,0:23:69.24:0,69,1843	0/0:9,0:9:27.09:0,27,740	0/0:30,0:30:84.28:0,84,2217	0/0:28,0:28:84.29:0,84,2280	0/0:28,0:28:78.27:0,78,2123	0/0:27,0:27:81.27:0,81,2120	0/0:18,0:18:54.18:0,54,1388	0/0:27,0:27:81.26:0,81,2116	0/0:18,0:18:54.19:0,54,1478	0/0:24,0:24:72.25:0,72,1972	0/0:22,0:22:66.20:0,66,1742	0/0:15,0:15:45.14:0,45,1175	0/0:20,0:20:57.20:0,57,1561	1/1:1,6:7:14.99:218,15,0	1/1:1,27:28:81.17:1482,81,0	1/1:1,14:15:33.11:639,33,0	0/0:26,0:26:75.26:0,75,2053	0/0:16,0:16:45.15:0,45,1232	0/0:13,0:13:39.13:0,39,1028	0/0:28,0:28:84.28:0,84,2247	0/1:2,28:30:74.12:1490,0,74	1/1:2,31:33:83.96:1627,84,0	1/1:0,2:2:6.02:116,6,0
chr10	74947064	.	CT	C	3567.11	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.914;DP=671;FS=1.735;HRun=5;HaplotypeScore=66.3302;InbreedingCoeff=0.9952;MQ=76.72;MQ0=0;MQRankSum=-0.636;QD=28.31;ReadPosRankSum=-0.285;VQSLOD=3.7067;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,126,1674	0/0:9,0:9:27.09:0,27,369	0/0:16,0:16:20.46:0,20,460	0/0:15,0:15:29.87:0,30,349	0/0:15,0:15:36.10:0,36,461	0/0:27,0:27:78.26:0,78,1067	0/0:22,0:22:60.20:0,60,820	0/0:36,0:36:99:0,102,1380	0/0:21,0:21:63.20:0,63,848	0/0:27,0:27:72.11:0,72,887	0/0:16,0:16:48.15:0,48,641	0/0:31,0:31:87.28:0,87,1174	0/0:25,0:25:75.20:0,75,988	0/0:26,0:26:78.25:0,78,1049	0/0:36,0:36:99:0,102,1395	0/0:24,0:24:72.23:0,72,970	0/0:32,0:32:93.30:0,93,1256	0/0:20,0:20:60.12:0,60,777	1/1:4,14:18:41.75:437,42,0	1/1:3,21:24:60.13:666,60,0	1/1:2,24:26:69.19:781,69,0	0/0:19,0:19:54.14:0,54,680	0/0:24,0:24:60.16:0,60,798	0/0:36,0:36:99:0,108,1475	0/0:19,0:19:54.13:0,54,703	1/1:3,22:25:25.53:664,26,0	1/1:0,28:28:75.17:850,75,0	1/1:0,5:5:15.04:170,15,0
chr10	74948308	.	GA	G	2409.31	PASS	AB=0.917;AC=15;AF=0.268;AN=56;BaseQRankSum=8.987;DP=510;FS=24.114;HRun=8;HaplotypeScore=66.3989;InbreedingCoeff=0.9369;MQ=71.12;MQ0=1;MQRankSum=1.144;QD=18.25;ReadPosRankSum=2.662;VQSLOD=2.3123;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:60.09:579,60,0	0/0:9,0:9:27.08:0,27,326	0/0:16,0:15:21.20:0,21,408	0/0:11,0:10:8.85:0,9,104	0/0:31,0:31:90.26:0,90,1065	0/0:20,0:19:57.17:0,57,679	0/0:10,0:10:30.09:0,30,362	0/0:37,0:37:99:0,99,1154	1/1:1,16:17:45.07:434,45,0	0/0:27,0:27:81.25:0,81,979	0/0:17,0:17:42.13:0,42,507	1/1:2,12:14:36.05:348,36,0	1/1:0,13:13:33.05:318,33,0	0/0:14,0:14:33.10:0,33,399	0/0:18,0:18:54.16:0,54,642	0/0:20,1:21:28.20:0,28,614	0/0:19,0:19:51.10:0,51,588	0/1:20,2:22:0.77:1,0,558	0/0:18,0:18:51.11:0,51,582	0/0:22,0:22:63.18:0,63,749	0/0:20,0:20:54.15:0,54,641	1/1:0,10:10:27.04:261,27,0	1/1:2,12:14:30.03:289,30,0	1/1:2,15:17:39.06:377,39,0	0/0:16,0:16:45.13:0,45,533	0/0:22,0:22:48.15:0,48,579	0/0:23,0:23:57.16:0,57,677	0/0:7,0:7:21.05:0,21,241
chr10	74948936	.	GTTT	G	12032.93	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=16.515;DP=728;FS=0.599;HRun=8;HaplotypeScore=111.6824;InbreedingCoeff=0.9993;MQ=76.30;MQ0=0;MQRankSum=-6.038;QD=34.18;ReadPosRankSum=6.055;VQSLOD=3.3202;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:37:66.21:973,66,0	0/0:10,0:10:27.09:0,27,562	0/0:20,0:20:45.57:0,46,860	0/0:16,0:15:37.17:0,37,612	0/0:25,0:25:63.22:0,63,1337	0/0:20,0:20:60.21:0,60,1282	0/0:29,0:29:81.27:0,81,1658	0/0:35,0:34:99:0,99,2051	1/1:1,26:27:60.20:877,60,0	0/0:29,0:29:81.27:0,81,1691	0/0:14,0:14:42.13:0,42,859	1/1:4,33:37:81.27:1187,81,0	1/1:1,27:28:75.25:1075,75,0	0/0:32,0:32:93.32:0,93,1933	0/0:46,0:46:99:0,132,2792	0/0:27,0:27:72.24:0,72,1504	0/0:30,0:30:90.31:0,90,1964	0/0:23,0:23:63.22:0,63,1321	1/1:1,19:20:54.65:794,55,0	1/1:0,27:27:69.22:1001,69,0	1/1:1,29:30:69.87:1057,70,0	1/1:1,23:24:51.16:751,51,0	1/1:2,24:27:65.79:970,66,0	1/1:1,20:21:54.18:796,54,0	0/0:20,0:20:54.18:0,54,1100	1/1:3,29:32:87.29:1277,87,0	1/1:3,31:34:66.19:972,66,0	1/1:0,8:8:21.07:303,21,0
chr10	74949520	.	A	AACACAC	5410.30	PASS	AB=1.000;AC=31;AF=0.596;AN=52;BaseQRankSum=5.768;DP=690;FS=0.438;HRun=0;HaplotypeScore=175.3744;InbreedingCoeff=0.7917;MQ=51.19;MQ0=22;MQRankSum=-6.159;QD=15.03;ReadPosRankSum=-0.885;VQSLOD=4.3064;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:25:5.99:48,6,0	0/0:9,0:9:15.05:0,15,291	./.	./.	0/0:25,0:26:66.22:0,66,1275	0/0:32,0:34:66.20:0,66,1251	0/0:22,0:23:49.82:0,50,930	0/0:49,0:43:80.70:0,81,1432	1/1:15,0:21:5.96:44,6,0	1/1:11,18:31:21.24:1290,21,0	1/1:10,16:27:13.67:105,14,0	1/1:20,0:24:9.53:80,10,0	0/0:16,0:17:0.47:0,0,1	0/0:29,0:30:72.22:0,72,1376	0/0:28,0:28:72.20:0,72,1376	1/1:9,12:23:16.16:279,16,0	0/0:33,0:33:2.23:0,2,973	0/0:32,0:32:66.14:0,66,1241	1/1:22,0:24:38.94:578,39,0	1/1:31,0:31:3.69:130,4,0	0/1:20,0:16:0:0,0,0	1/1:10,0:15:4.56:40,5,0	1/1:10,0:12:7.54:52,8,0	1/1:15,0:18:5.99:48,6,0	1/1:13,4:18:21.04:420,21,0	1/1:34,0:34:81.03:1638,81,0	1/1:22,0:20:18.70:460,19,0	1/1:9,0:7:14.99:199,15,0
chr10	74949533	.	A	ACACACACG	6066.06	PASS	AB=1.000;AC=26;AF=0.481;AN=54;BaseQRankSum=3.183;DP=666;FS=8.842;HRun=0;HaplotypeScore=188.4573;InbreedingCoeff=0.4446;MQ=49.62;MQ0=23;MQRankSum=-7.286;QD=17.58;ReadPosRankSum=0.623;VQSLOD=3.2070;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:16.35:16,0,18	0/0:7,0:7:21.02:0,21,442	0/0:25,0:4:2.90:0,3,16	./.	0/0:28,0:28:78.20:0,78,1792	0/0:31,0:31:78.17:0,78,1761	0/0:29,0:29:78.04:0,78,1469	0/0:43,0:37:99:0,102,2100	1/1:21,0:19:2.49:38,2,0	0/1:26,0:26:94.83:571,0,95	1/1:27,0:26:2.77:24,3,0	0/1:17,0:17:10.70:107,0,11	1/1:15,0:13:2.42:22,2,0	0/0:29,0:29:75.06:0,75,1843	0/0:33,0:33:90.23:0,90,1988	1/1:23,0:22:9.25:166,9,0	0/0:35,0:34:74.14:0,74,1557	0/0:28,0:28:75.17:0,75,1743	1/1:25,1:25:59.36:1140,59,0	1/1:11,16:29:6.02:217,6,0	0/0:6,7:12:0:0,0,0	0/1:19,0:18:2.73:11,0,3	0/1:12,0:12:14.09:14,0,25	0/1:17,0:16:11.52:16,0,12	1/1:19,0:15:13.93:149,14,0	1/1:7,24:33:63.66:2460,64,0	1/1:18,2:22:27.09:794,27,0	1/1:11,0:9:15.05:321,15,0
chr10	74949558	.	C	CTCTCTCTCTCTCTCTT	9858.63	PASS	AB=0.990;AC=25;AF=0.446;AN=56;BaseQRankSum=8.252;DP=677;FS=5.306;HRun=0;HaplotypeScore=316.2504;InbreedingCoeff=0.1626;MQ=56.15;MQ0=12;MQRankSum=-10.534;QD=23.99;ReadPosRankSum=-2.347;VQSLOD=2.8339;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:29.73:230,30,0	0/0:9,0:9:24.04:0,24,555	0/0:20,0:11:18.77:0,19,167	0/0:30,0:11:13.76:0,14,151	0/0:31,0:31:75.15:0,75,2442	0/0:26,0:26:66.16:0,66,2171	0/0:31,0:31:69.18:0,69,2223	0/0:31,0:28:36.01:0,36,663	1/1:21,0:21:50.92:1244,51,0	0/1:28,0:28:98.47:1201,0,98	0/1:26,0:25:10.64:11,0,41	1/1:15,0:18:32.86:984,33,0	1/1:3,10:13:5.14:227,5,0	0/0:36,0:36:89.71:0,90,3002	0/0:31,0:31:78.18:0,78,2658	0/1:27,0:26:66.09:1687,0,66	0/1:31,0:29:36.91:37,0,2367	0/0:21,0:21:45.12:0,45,1705	0/1:22,0:22:99:332,0,133	0/1:35,0:34:99:298,0,153	1/1:15,0:12:2.49:146,2,0	1/1:17,1:21:37.91:406,38,0	0/1:14,0:16:6.69:150,0,7	1/1:12,0:13:8.09:58,8,0	0/1:26,0:22:50.88:51,0,128	0/1:39,0:37:99:1608,0,187	0/1:23,0:22:99:1082,0,107	0/1:12,0:9:81.80:107,0,82
chr10	74953467	.	TTTTTTTTTG	T	1129.71	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-3.974;DP=595;FS=3.548;HRun=0;HaplotypeScore=175.3847;InbreedingCoeff=0.2918;MQ=59.57;MQ0=17;MQRankSum=2.633;QD=5.28;ReadPosRankSum=-1.946;VQSLOD=2.5751;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:6.92:0,7,1678	0/0:6,0:6:18.04:0,18,533	0/0:37,0:15:12.15:0,12,230	0/0:22,0:8:4.43:0,4,46	0/0:30,0:30:68.85:0,69,1749	0/0:28,0:27:74.96:0,75,2170	0/0:19,0:19:47.95:0,48,1237	0/0:38,0:38:47.88:0,48,1981	0/0:18,0:18:18.78:0,19,806	1/1:16,1:16:36.47:372,36,0	1/1:6,1:7:15.58:174,16,0	0/1:20,0:19:1.96:2,0,696	0/1:17,0:17:55.99:56,0,451	0/0:12,0:12:30.10:0,30,929	0/0:24,0:23:66.06:0,66,1643	1/1:14,1:14:8.29:345,8,0	0/0:24,0:24:58.57:0,59,1609	0/0:18,0:18:38.53:0,39,1047	0/1:33,0:28:23.43:23,0,908	0/0:22,0:22:46.02:0,46,909	0/1:13,0:12:21.68:22,0,395	0/0:18,0:17:16.23:0,16,819	0/1:20,0:19:69.65:70,0,564	0/1:21,0:20:44.95:45,0,799	1/1:2,19:21:3.01:81,3,0	0/1:30,0:30:99:109,0,981	0/0:16,0:14:18.62:0,19,670	0/0:6,0:6:15.05:0,15,274
chr10	74953475	.	TG	T	5509.43	PASS	AB=0.944;AC=40;AF=0.714;AN=56;BaseQRankSum=6.889;DP=595;FS=11.515;HRun=1;HaplotypeScore=82.5749;InbreedingCoeff=0.4433;MQ=53.78;MQ0=24;MQRankSum=-2.242;QD=11.09;ReadPosRankSum=-3.932;VQSLOD=0.9577;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:43,2:45:99:697,99,0	0/0:7,0:7:19.35:0,19,132	0/1:30,2:10:24.82:25,0,69	0/0:20,0:6:2.86:0,3,23	0/1:19,12:30:69.27:69,0,239	0/0:28,0:26:11.03:0,11,428	0/0:19,0:19:31.91:0,32,299	0/1:34,0:34:44.85:45,0,369	1/1:19,0:19:41.16:252,41,0	1/1:18,1:18:23.36:347,23,0	1/1:10,0:10:22.09:165,22,0	1/1:18,1:18:52.53:373,53,0	1/1:16,0:15:33.80:275,34,0	0/1:13,0:13:24.31:24,0,49	0/0:24,0:23:14.13:0,14,310	1/1:17,0:16:39.42:342,39,0	0/1:25,0:25:31.27:31,0,229	0/1:18,0:17:1.27:1,0,201	1/1:33,1:27:66.70:538,67,0	1/1:21,0:21:58.34:404,58,0	1/1:13,1:12:13.84:147,14,0	1/1:17,1:17:32.83:219,33,0	1/1:19,0:18:28.69:234,29,0	1/1:18,1:17:42.18:282,42,0	1/1:19,0:19:2.97:20,3,0	1/1:32,1:33:91.94:655,92,0	1/1:15,1:14:39.21:280,39,0	1/1:6,0:6:13.38:85,13,0
chr10	74954202	.	TA	T	1050.75	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=2.313;DP=383;FS=0.562;HRun=5;HaplotypeScore=65.5807;InbreedingCoeff=0.7698;MQ=63.31;MQ0=12;MQRankSum=0.178;QD=10.51;ReadPosRankSum=0.226;VQSLOD=0.7311;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:35.93:0,36,327	0/0:2,0:2:3:0,3,25	0/1:26,0:11:14.41:14,0,123	0/0:17,0:4:6.06:0,6,36	0/0:23,0:23:59.18:0,59,712	0/0:16,0:16:42.81:0,43,430	0/0:12,0:12:27.01:0,27,319	0/0:34,0:33:80.69:0,81,833	0/0:10,0:10:20.73:0,21,212	0/0:6,0:6:14.77:0,15,126	0/0:12,0:15:43.82:0,44,403	0/0:8,0:8:12.02:0,12,126	0/0:5,0:5:9.02:0,9,97	0/0:20,0:19:36.39:0,36,448	0/0:6,0:5:12.04:0,12,152	0/0:13,0:13:33:0,33,342	0/0:18,0:17:40.64:0,41,461	0/0:31,0:29:65.18:0,65,780	1/1:14,1:16:35.83:307,36,0	1/1:11,1:12:11.82:94,12,0	1/1:9,1:10:20.98:182,21,0	0/0:5,0:4:11.94:0,12,97	0/0:6,0:6:6.01:0,6,73	0/0:5,0:3:6.02:0,6,72	0/0:10,0:10:21.26:0,21,182	1/1:13,1:14:25.59:296,26,0	1/1:17,0:17:32.85:263,33,0	1/1:5,0:5:9:77,9,0
chr10	74954206	.	AAT	A	1755.04	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=0.370;DP=371;FS=1.129;HRun=0;HaplotypeScore=63.7573;InbreedingCoeff=0.8144;MQ=62.74;MQ0=21;MQRankSum=-0.538;QD=18.28;ReadPosRankSum=-0.816;VQSLOD=2.9154;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:41.84:0,42,476	0/0:1,0:1:3:0,3,25	0/1:25,0:10:2.32:2,0,176	0/0:16,0:4:6.35:0,6,47	0/0:27,0:27:65.99:0,66,1012	0/0:17,0:17:43.62:0,44,603	0/0:13,0:12:27.48:0,27,441	0/0:32,0:32:86.96:0,87,1166	0/0:8,0:8:21.06:0,21,313	0/0:7,0:5:14.70:0,15,94	0/0:15,0:15:31.61:0,32,270	0/0:8,0:8:12.02:0,12,157	0/0:4,0:4:9.03:0,9,144	0/0:21,0:19:47.98:0,48,724	0/0:6,0:5:14.94:0,15,242	0/0:12,0:12:35.69:0,36,263	0/0:18,0:17:45:0,45,686	0/0:31,0:27:69.02:0,69,1118	1/1:2,13:16:43.26:457,43,0	1/1:1,8:9:16.73:121,17,0	1/1:2,8:9:20.56:282,21,0	0/0:5,0:4:12.01:0,12,145	0/0:5,0:5:9.01:0,9,128	0/0:4,0:2:6.02:0,6,102	0/0:8,0:8:23.07:0,23,147	1/1:2,11:15:28.67:489,29,0	1/1:0,13:16:36:461,36,0	1/1:0,4:5:9.03:123,9,0
chr10	74954207	.	A	AT	403.19	PASS	AB=0.749;AC=11;AF=0.204;AN=54;BaseQRankSum=-0.998;DP=368;FS=0.706;HRun=14;HaplotypeScore=63.3312;InbreedingCoeff=0.2708;MQ=61.32;MQ0=22;MQRankSum=-1.079;QD=5.04;ReadPosRankSum=-0.070;VQSLOD=1.8392;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,3:14:4.97:168,0,5	./.	0/0:24,0:10:8.34:0,8,43	0/0:15,0:3:2.77:0,3,17	0/0:24,0:26:49.04:0,49,302	0/0:16,0:16:23.14:0,23,140	0/0:13,0:12:20.37:0,20,134	0/1:26,4:30:48.53:49,0,185	1/1:3,4:8:1.63:125,2,0	0/0:7,0:5:8.66:0,9,54	0/0:15,0:15:12.13:0,12,168	1/1:8,0:8:3:27,3,0	0/1:1,3:4:10.26:44,0,10	0/0:21,0:19:42.26:0,42,248	0/0:7,0:5:11.74:0,12,74	0/0:11,0:12:28.50:0,29,176	0/0:18,0:18:4.98:0,5,147	0/0:27,1:27:28.64:0,29,302	0/0:16,0:16:28.90:0,29,99	0/0:10,0:10:9.60:0,10,36	0/0:10,0:9:15.08:0,15,49	1/1:3,1:4:6:53,6,0	0/1:2,2:4:10.36:34,0,10	0/1:4,1:3:10.24:44,0,10	0/0:8,0:8:14.26:0,14,87	0/0:15,0:15:23.57:0,24,73	0/0:16,0:16:25.37:0,25,80	0/0:5,0:5:6.11:0,6,19
chr10	74954226	.	CT	C	693.67	PASS	AB=0.920;AC=15;AF=0.278;AN=54;BaseQRankSum=0.335;DP=353;FS=1.630;HRun=8;HaplotypeScore=54.9611;InbreedingCoeff=0.7484;MQ=54.32;MQ0=29;MQRankSum=-2.806;QD=8.07;ReadPosRankSum=-0.359;VQSLOD=0.6265;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,7:14:30.04:288,30,0	./.	0/0:7,0:3:0:0,0,0	0/0:11,0:2:2.88:0,3,15	0/0:25,0:25:54.10:0,54,614	0/0:11,0:10:21.06:0,21,253	0/0:13,0:10:17.97:0,18,184	0/0:23,0:18:33.06:0,33,381	1/1:8,3:11:11.83:110,12,0	0/0:7,0:4:9.03:0,9,109	0/0:15,0:15:33.09:0,33,386	1/1:8,4:11:15.01:144,15,0	1/1:3,6:9:15.01:145,15,0	0/0:20,0:17:33.49:0,33,342	0/0:9,0:6:6.02:0,6,72	0/0:12,0:12:30.08:0,30,343	0/1:21,2:22:9.79:10,0,433	0/0:30,0:26:54.12:0,54,636	0/0:16,0:16:21.04:0,21,231	0/0:10,0:10:15.04:0,15,174	0/0:13,0:11:14.99:0,15,151	1/1:2,2:3:9.01:87,9,0	1/1:3,3:6:5.83:58,6,0	1/1:4,1:2:3:29,3,0	0/0:7,0:7:18.04:0,18,207	0/0:14,0:13:30.07:0,30,341	0/0:18,0:17:30.08:0,30,348	0/0:6,0:6:12.04:0,12,145
chr10	74955882	.	T	TA	10431.17	PASS	AB=0.750;AC=34;AF=0.607;AN=56;BaseQRankSum=-14.606;DP=710;FS=3.503;HRun=10;HaplotypeScore=68.8455;InbreedingCoeff=0.8668;MQ=72.91;MQ0=0;MQRankSum=-1.583;QD=23.55;ReadPosRankSum=0.048;VQSLOD=5.6004;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,31:36:87.25:949,87,0	0/0:12,0:12:29.93:0,30,243	0/0:20,0:18:33.29:0,33,247	0/1:8,1:9:27.28:27,0,57	0/0:31,0:31:86.54:0,87,708	0/0:30,0:30:83.90:0,84,690	0/0:26,1:28:44.96:0,45,565	0/0:30,2:32:48.89:0,49,608	1/1:2,22:24:63.09:658,63,0	1/1:10,16:26:26.45:471,26,0	1/1:3,14:18:41.90:418,42,0	1/1:7,29:36:53.55:774,54,0	1/1:4,26:30:44.53:679,45,0	0/0:36,0:36:86.80:0,87,704	0/0:39,0:40:94.91:0,95,769	1/1:4,26:30:75.19:799,75,0	0/0:24,0:24:65.90:0,66,542	0/0:14,0:14:32.94:0,33,271	1/1:2,17:18:45.11:480,45,0	1/1:9,25:34:11.14:716,11,0	1/1:6,17:23:63.04:630,63,0	1/1:3,19:22:54.14:576,54,0	1/1:4,20:24:57.61:608,58,0	1/1:6,25:31:62.88:727,63,0	1/1:2,13:15:27.07:288,27,0	1/1:3,25:28:28.92:718,29,0	1/1:3,26:29:49.94:743,50,0	0/1:3,6:9:3.59:171,0,4
chr10	74956362	.	C	CA	6387.56	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-15.025;DP=719;FS=2.413;HRun=3;HaplotypeScore=64.0533;InbreedingCoeff=0.9993;MQ=86.20;MQ0=0;MQRankSum=-3.752;QD=40.95;ReadPosRankSum=2.496;VQSLOD=4.3710;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.26:0,81,1047	0/0:11,0:11:33.11:0,33,429	0/0:26,0:26:64.88:0,65,826	0/0:24,0:24:60.12:0,60,733	0/0:37,0:37:99:0,111,1441	0/0:24,0:24:72.23:0,72,933	0/0:20,0:20:54.18:0,54,701	0/0:32,0:31:93.30:0,93,1195	0/0:33,0:33:96.28:0,96,1217	0/0:26,0:26:78.25:0,78,1013	0/0:33,0:33:93.30:0,93,1208	0/0:24,0:24:72.22:0,72,921	0/0:26,0:26:78.24:0,78,995	0/0:30,0:30:90.29:0,90,1168	0/0:29,0:29:84.27:0,84,1090	0/0:38,0:38:99:0,111,1441	0/0:13,0:13:36.12:0,36,466	0/0:13,0:13:33.11:0,33,428	1/1:1,11:12:33.11:495,33,0	1/1:0,37:37:99:1618,108,0	1/1:0,16:16:42.14:630,42,0	0/0:23,0:23:69.22:0,69,896	0/0:24,0:24:69.22:0,69,894	0/0:10,0:10:30.10:0,30,390	0/0:38,0:38:99:0,114,1479	1/1:2,32:34:24.41:1358,24,0	1/1:2,35:37:93.31:1388,93,0	1/1:0,20:20:60.20:899,60,0
chr10	74956619	.	TG	T	5387.48	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=0.321;DP=727;FS=3.490;HRun=3;HaplotypeScore=92.8172;InbreedingCoeff=0.9999;MQ=75.94;MQ0=0;MQRankSum=-2.327;QD=31.51;ReadPosRankSum=2.104;VQSLOD=4.9965;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.24:0,78,1078	0/0:16,0:16:45.15:0,45,642	0/0:20,0:20:43.48:0,43,515	0/0:13,0:14:33.52:0,34,330	0/0:32,0:32:93.25:0,93,1253	0/0:22,0:22:66.21:0,66,927	0/0:19,0:19:57.19:0,57,815	0/0:31,0:31:92.05:0,92,1204	0/0:23,0:23:66.21:0,66,925	0/0:30,0:30:87.25:0,87,1222	0/0:23,0:23:69.23:0,69,987	0/0:19,0:19:57.16:0,57,773	0/0:29,0:29:84.24:0,84,1148	0/0:45,0:45:99:0,132,1815	0/0:30,0:30:90.30:0,90,1286	0/0:29,0:29:81.23:0,81,1090	0/0:17,0:17:48.13:0,48,666	0/0:22,0:22:63.18:0,63,879	1/1:1,17:18:51.15:621,51,0	1/1:0,35:35:99:1243,102,0	1/1:0,19:19:45.14:557,45,0	0/0:28,0:28:84.23:0,84,1131	0/0:31,0:31:93.29:0,93,1283	0/0:18,0:18:54.15:0,54,735	0/0:32,0:32:96.28:0,96,1292	1/1:3,35:38:68.30:1222,68,0	1/1:0,43:43:99:1224,99,0	1/1:0,18:18:42.13:520,42,0
chr10	74957182	.	CTTAT	C	8120.45	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=16.703;DP=697;FS=2.409;HRun=0;HaplotypeScore=119.6256;InbreedingCoeff=0.9960;MQ=82.83;MQ0=0;MQRankSum=-3.896;QD=44.62;ReadPosRankSum=3.890;VQSLOD=5.5553;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:66.23:1232,66,0	0/0:7,0:7:21.07:0,21,560	0/0:22,0:22:55.20:0,55,1174	0/0:22,0:22:45.59:0,46,1326	0/0:32,0:32:96.33:0,96,2484	0/0:28,0:28:84.29:0,84,2203	0/0:17,0:17:48.16:0,48,1176	0/0:29,0:29:87.30:0,87,2249	1/1:3,24:27:63.22:1175,63,0	0/0:34,0:34:90.31:0,90,2331	0/0:29,0:29:81.28:0,81,2151	1/1:1,28:29:78.27:1435,78,0	1/1:0,32:32:81.28:1512,81,0	0/0:28,0:28:78.27:0,78,2076	0/0:29,0:29:84.25:0,84,2135	0/0:27,1:28:25.28:0,25,1989	0/0:20,0:20:57.20:0,57,1484	0/0:17,0:17:51.18:0,51,1360	0/0:23,0:23:66.23:0,66,1641	0/0:32,0:32:96.33:0,96,2453	0/0:30,0:30:87.30:0,87,2257	1/1:0,28:28:72.25:1334,72,0	1/1:0,17:17:45.15:840,45,0	1/1:0,17:17:33.11:594,33,0	0/0:25,0:25:75.25:0,75,1945	0/0:31,0:31:90.30:0,90,2324	0/0:27,0:27:72.25:0,72,1885	0/0:5,0:5:15.05:0,15,400
chr10	74958170	.	GT	G	1385.25	PASS	AC=10;AF=0.238;AN=42;BaseQRankSum=4.103;DP=509;FS=87.582;HRun=4;HaplotypeScore=73.9915;InbreedingCoeff=0.8651;MQ=30.74;MQ0=180;MQRankSum=-5.003;QD=13.07;ReadPosRankSum=0.732;VQSLOD=-0.4412;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:13,0:13:30.06:0,30,397	./.	0/0:9,0:2:4.56:0,5,46	0/0:28,0:28:29.88:0,30,373	0/0:18,0:12:21.03:0,21,271	0/0:12,0:5:9.03:0,9,124	./.	1/1:0,25:13:27.08:323,27,0	0/0:29,0:27:78.22:0,78,1069	0/0:15,0:15:6.02:0,6,84	1/1:2,22:17:27.08:323,27,0	1/1:0,15:11:21.06:251,21,0	0/0:27,0:18:18.06:0,18,251	0/0:22,0:10:15.05:0,15,208	0/0:15,0:10:15.05:0,15,209	./.	./.	0/0:8,0:3:12.02:0,12,149	0/0:25,0:25:60.20:0,60,838	./.	1/1:0,17:16:15.05:179,15,0	1/1:0,25:25:39.10:466,39,0	./.	0/0:18,0:18:38.94:0,39,500	0/0:29,0:25:72.24:0,72,1007	0/0:23,0:20:33.10:0,33,456	0/0:7,0:5:2.92:0,3,42
chr10	74959152	.	A	AC	1194.80	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.723;DP=608;FS=162.556;HRun=1;HaplotypeScore=96.5101;InbreedingCoeff=0.9924;MQ=55.71;MQ0=1;MQRankSum=-10.007;QD=12.19;ReadPosRankSum=1.697;VQSLOD=-0.1566;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,7:17:23.87:177,24,0	0/0:17,0:17:51.13:0,51,660	0/0:23,0:15:38.14:0,38,507	0/0:24,0:19:44.45:0,44,531	0/0:45,0:45:99:0,132,1636	0/0:18,0:18:51.13:0,51,667	0/0:17,0:17:51.07:0,51,628	0/0:29,0:29:80.43:0,80,972	1/1:5,11:16:35.80:264,36,0	0/0:19,0:19:57.14:0,57,687	0/0:21,0:21:60.11:0,60,747	1/1:5,9:14:25.10:198,25,0	1/1:5,14:19:34.55:336,35,0	0/0:17,0:17:51.08:0,51,652	0/0:33,0:33:96.27:0,96,1286	0/0:27,0:27:81.18:0,81,1055	0/0:31,0:30:93.20:0,93,1190	0/0:14,0:14:36.09:0,36,454	0/0:19,0:19:57.14:0,57,689	0/0:27,0:27:78.13:0,78,977	0/0:18,0:18:51.15:0,51,681	1/1:7,9:16:26.29:189,26,0	1/1:5,6:11:20.49:142,20,0	1/1:2,3:5:11.92:86,12,0	0/0:23,0:23:69.15:0,69,890	0/0:31,0:31:93.28:0,93,1216	0/0:40,0:40:99:0,117,1539	0/0:17,0:16:51.13:0,51,645
chr10	74959153	.	A	ACAC	2301.65	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.289;DP=603;FS=138.614;HRun=0;HaplotypeScore=113.4913;InbreedingCoeff=0.9454;MQ=56.52;MQ0=1;MQRankSum=-9.757;QD=23.25;ReadPosRankSum=1.137;VQSLOD=0.6205;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,7:17:8.91:279,9,0	0/0:17,0:17:51.17:0,51,900	0/0:24,0:16:30.99:0,31,673	0/0:22,0:17:36.73:0,37,707	0/0:45,0:45:99:0,132,2193	0/0:18,0:18:51.13:0,51,876	0/0:16,0:16:48.16:0,48,866	0/0:28,0:28:81.21:0,81,1357	1/1:5,10:16:36.12:500,36,0	0/0:19,0:19:57.16:0,57,948	0/0:20,0:20:60.21:0,60,1068	1/1:5,8:14:2.23:336,2,0	1/1:7,12:19:50.53:613,51,0	0/0:17,0:17:51.09:0,51,849	0/0:32,0:32:96.28:0,96,1715	0/0:28,0:28:81.22:0,81,1433	0/0:31,0:30:93.28:0,93,1638	0/0:14,0:14:42.08:0,42,682	0/0:18,0:18:54.19:0,54,986	0/0:27,0:27:81.22:0,81,1404	0/0:18,0:18:51.16:0,51,920	1/1:9,8:17:30.01:362,30,0	1/1:5,5:11:21.02:256,21,0	1/1:2,3:5:11.98:144,12,0	0/0:23,0:23:69.23:0,69,1224	0/0:31,0:31:93.27:0,93,1648	0/0:39,0:39:99:0,114,2065	0/0:17,0:16:51.17:0,51,923
chr10	74959932	.	C	CT	2705.23	PASS	AB=0.689;AC=15;AF=0.268;AN=56;BaseQRankSum=1.104;DP=619;FS=6.479;HRun=12;HaplotypeScore=70.1184;InbreedingCoeff=0.5583;MQ=59.07;MQ0=8;MQRankSum=0.618;QD=11.66;ReadPosRankSum=-0.367;VQSLOD=3.1017;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:31:78.62:0,79,559	0/0:8,0:8:11.89:0,12,87	0/0:14,0:10:2.94:0,3,21	0/0:10,1:5:2.85:0,3,21	0/0:34,0:40:79.59:0,80,543	0/0:17,0:17:30.87:0,31,213	0/0:23,0:23:32.45:0,32,231	0/0:26,1:28:25.34:0,25,257	0/0:11,0:10:20.86:0,21,153	0/1:15,3:17:4.09:106,0,4	1/1:13,16:32:21.06:517,21,0	0/0:15,0:15:26.79:0,27,197	0/0:12,0:14:31.15:0,31,199	0/0:10,0:10:23.68:0,24,170	0/0:21,0:22:37.68:0,38,264	0/1:9,15:24:20.66:305,0,21	0/0:31,0:34:70.72:0,71,482	0/0:30,0:33:68.72:0,69,477	0/1:11,8:21:4.73:272,0,5	1/1:14,16:30:7.05:361,7,0	1/1:5,5:12:11.02:125,11,0	0/0:23,0:24:37.71:0,38,264	0/0:28,0:28:65.49:0,65,473	0/0:19,0:18:44.35:0,44,327	0/1:14,14:28:0.21:353,0,0	1/1:11,16:27:41.03:373,41,0	1/1:8,13:21:4.26:187,4,0	0/1:5,11:16:8.59:280,0,9
chr10	74960701	.	GAGACTCGAGC	G	9594.27	PASS	AB=0.963;AC=16;AF=0.286;AN=56;BaseQRankSum=15.151;DP=677;FS=15.627;HRun=0;HaplotypeScore=199.8938;InbreedingCoeff=0.8480;MQ=84.91;MQ0=2;MQRankSum=-15.636;QD=43.02;ReadPosRankSum=2.849;VQSLOD=3.4363;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,28:32:54.66:1633,55,0	0/0:11,0:11:30.10:0,30,1590	0/0:25,0:25:72.25:0,72,3484	0/0:23,0:23:63.21:0,63,2529	0/0:17,0:17:48.16:0,48,2540	0/0:34,0:34:99:0,102,4886	0/0:26,0:26:74.97:0,75,3618	0/0:34,0:34:99:0,102,4728	1/1:2,14:16:33.11:1097,33,0	0/0:29,0:29:81.26:0,81,3982	0/0:12,0:12:36.12:0,36,1797	1/1:2,35:37:84.29:2794,84,0	1/1:3,15:17:42.14:1387,42,0	0/1:21,1:22:33.69:34,0,3033	0/0:24,0:24:72.25:0,72,3433	0/1:31,1:31:3.62:4,0,4241	0/0:27,0:27:78.27:0,78,3942	0/0:26,0:26:75.26:0,75,3747	0/0:20,0:20:60.21:0,60,3093	0/0:22,0:22:66.23:0,66,3277	0/0:26,0:26:75.26:0,75,3823	1/1:5,21:25:36.12:1094,36,0	1/1:1,12:13:18.06:553,18,0	1/1:4,23:27:29.64:998,30,0	0/0:24,0:24:69.24:0,69,3583	0/0:26,0:26:78.27:0,78,3894	0/0:36,0:36:99:0,105,5350	0/0:12,0:12:33.11:0,33,1761
chr10	74960908	.	A	AGGG	6868.01	PASS	AB=0.813;AC=25;AF=0.446;AN=56;BaseQRankSum=1.232;DP=564;FS=5.087;HRun=8;HaplotypeScore=104.9859;InbreedingCoeff=0.9443;MQ=85.51;MQ0=0;MQRankSum=-4.642;QD=28.15;ReadPosRankSum=2.340;VQSLOD=3.1507;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:33.11:457,33,0	0/0:11,0:11:33.11:0,33,434	0/0:23,0:22:52.87:0,53,645	0/0:18,0:18:36.07:0,36,447	0/0:28,0:28:69.20:0,69,891	0/0:32,0:32:87.27:0,87,1143	0/0:11,0:11:30.10:0,30,393	0/0:29,0:29:55.60:0,56,732	1/1:16,0:16:39.13:563,39,0	0/0:23,0:23:59.39:0,59,352	0/0:20,0:20:50.87:0,51,270	1/1:21,0:21:60.20:854,60,0	1/1:25,1:26:54.18:794,54,0	0/0:24,0:24:62.60:0,63,813	0/0:32,0:32:81.21:0,81,1049	0/0:18,0:17:41.38:0,41,205	0/0:11,0:11:30.08:0,30,377	0/0:12,0:12:33.09:0,33,433	1/1:10,6:17:20.96:284,21,0	1/1:6,8:17:18.06:342,18,0	1/1:3,12:19:24.04:408,24,0	1/1:15,0:15:33.11:459,33,0	1/1:30,0:30:81.27:1123,81,0	1/1:15,0:15:30.10:415,30,0	0/0:28,0:28:71.36:0,71,378	0/1:10,1:13:4.45:95,0,4	1/1:10,10:23:36.08:626,36,0	1/1:3,9:15:24.06:447,24,0
chr10	74960914	.	G	GGGA	8094.16	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-8.777;DP=570;FS=9.510;HRun=0;HaplotypeScore=94.1226;InbreedingCoeff=0.6192;MQ=85.61;MQ0=0;MQRankSum=-3.209;QD=33.45;ReadPosRankSum=5.750;VQSLOD=4.9160;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:16:33.11:707,33,0	0/0:11,0:11:33.11:0,33,522	0/0:22,0:21:53.79:0,54,717	0/0:19,0:19:45.05:0,45,584	0/0:26,0:26:78.20:0,78,1104	0/0:31,0:31:93.28:0,93,1403	0/0:10,0:10:30.08:0,30,451	0/0:33,0:33:90.10:0,90,1164	1/1:1,17:19:39.13:830,39,0	0/0:23,0:23:47.19:0,47,167	0/0:21,0:21:36.85:0,37,116	1/1:0,23:25:60.21:1288,60,0	1/1:7,23:31:54.19:1148,54,0	0/0:25,0:25:52.26:0,52,1028	0/0:32,0:32:87.27:0,87,1326	0/0:21,0:21:31.29:0,31,97	0/0:11,0:11:30.07:0,30,447	0/0:15,0:15:42.06:0,42,588	0/1:14,0:14:99:103,0,108	0/1:14,0:14:69.49:180,0,69	0/1:19,0:19:23.01:163,0,23	1/1:2,13:16:33.11:708,33,0	1/1:1,26:29:81.28:1736,81,0	1/1:2,14:16:30.10:633,30,0	0/0:28,0:28:51.66:0,52,162	0/1:11,0:11:26.15:26,0,56	0/1:20,0:20:23.50:324,0,23	1/1:12,0:12:23.10:248,23,0
chr10	74960916	.	G	GA	3769.09	PASS	AB=0.967;AC=21;AF=0.375;AN=56;BaseQRankSum=1.229;DP=564;FS=2.923;HRun=1;HaplotypeScore=83.8862;InbreedingCoeff=0.8088;MQ=86.03;MQ0=0;MQRankSum=-6.271;QD=15.14;ReadPosRankSum=6.974;VQSLOD=3.4766;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:3.72:19,0,4	0/0:11,0:11:33.11:0,33,426	0/0:22,0:21:55.82:0,56,593	0/0:19,0:19:53.90:0,54,529	0/0:27,0:27:78.20:0,78,949	0/0:32,0:32:93.28:0,93,1176	0/0:11,0:11:30.10:0,30,387	0/0:36,0:36:90.17:0,90,1029	0/1:19,0:19:2.17:28,0,2	1/1:2,24:26:72.16:943,72,0	1/1:1,20:21:57.15:783,57,0	1/1:25,0:25:31.15:76,31,0	1/1:28,0:29:26.92:69,27,0	0/0:25,0:25:69.20:0,69,864	0/0:32,0:32:90.17:0,90,1112	1/1:0,19:19:45.15:635,45,0	0/0:11,0:11:33.09:0,33,409	0/0:15,0:15:42.06:0,42,493	0/0:13,0:13:15.53:0,16,140	0/0:13,0:13:28.32:0,28,152	0/0:18,0:18:24:0,24,128	1/1:14,0:14:17.06:41,17,0	1/1:29,0:29:15.47:67,15,0	1/1:14,0:14:8.18:25,8,0	1/1:0,28:28:75.25:1061,75,0	0/1:8,1:9:22.02:22,0,100	0/0:16,0:16:33.97:0,34,165	0/0:14,0:14:22.16:0,22,98
chr10	74962403	.	G	GAA	5407.81	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=4.184;DP=540;FS=2.326;HRun=11;HaplotypeScore=72.7010;InbreedingCoeff=0.8480;MQ=60.43;MQ0=3;MQRankSum=1.345;QD=16.59;ReadPosRankSum=1.036;VQSLOD=3.7469;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,33:41:68.58:899,69,0	0/0:2,0:2:6.01:0,6,58	0/1:24,0:11:6.59:7,0,105	0/0:15,0:5:5.96:0,6,52	0/0:25,0:26:56.77:0,57,522	0/0:19,0:21:50.80:0,51,477	0/0:19,0:20:31.21:0,31,335	0/0:32,0:33:86.47:0,86,787	1/1:2,9:14:14.53:168,15,0	1/1:6,2:19:33.26:179,33,0	1/1:1,0:13:23.40:89,23,0	1/1:1,14:15:11.65:173,12,0	1/1:4,11:17:24.05:307,24,0	0/0:21,0:22:59.80:0,60,563	0/0:28,0:28:68.58:0,69,637	1/1:6,1:23:6.84:117,7,0	0/0:24,0:25:43.39:0,43,478	0/0:22,0:22:37.21:0,37,436	1/1:6,11:19:41.07:463,41,0	1/1:6,20:29:60.02:725,60,0	1/1:2,5:7:18.05:242,18,0	1/1:1,4:6:14.54:182,15,0	1/1:4,3:8:3.01:44,3,0	1/1:3,13:16:24.08:348,24,0	1/1:4,0:16:25.46:104,25,0	1/1:4,20:25:66.06:802,66,0	1/1:6,19:26:38.97:464,39,0	1/1:2,4:6:8.52:95,9,0
chr10	74963540	.	TG	T	4722.30	PASS	AB=0.520;AC=11;AF=0.196;AN=56;BaseQRankSum=12.668;DP=669;FS=2.061;HRun=2;HaplotypeScore=67.6129;InbreedingCoeff=0.8946;MQ=86.42;MQ0=0;MQRankSum=-3.009;QD=34.98;ReadPosRankSum=2.017;VQSLOD=5.3720;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,2099	0/0:8,0:8:24.07:0,24,339	0/0:20,0:20:56.27:0,56,711	0/0:29,0:29:66.40:0,66,922	0/0:41,0:41:99:0,120,1752	0/0:14,0:14:42.11:0,42,589	0/0:19,0:19:57.17:0,57,816	0/0:25,0:25:69.20:0,69,964	0/0:19,0:19:57.19:0,57,852	0/0:21,0:21:60.20:0,60,898	0/0:21,0:21:63.20:0,63,923	0/0:22,0:22:66.21:0,66,969	0/0:26,0:26:75.21:0,75,1077	0/0:20,0:20:60.16:0,60,817	0/0:33,0:33:99:0,99,1460	0/0:29,0:29:81.26:0,81,1183	0/0:33,0:33:99:0,99,1455	0/0:18,0:18:51.16:0,51,740	1/1:0,21:21:63.08:753,63,0	1/1:0,31:31:93.06:1109,93,0	1/1:0,18:18:51.12:642,51,0	0/0:21,0:21:63.20:0,63,923	0/0:21,0:21:62.79:0,63,885	0/0:20,0:20:60.20:0,60,897	0/0:24,0:24:69.22:0,69,997	0/1:2,24:26:11.38:856,0,11	1/1:1,26:27:69.22:895,69,0	1/1:0,12:12:36.12:467,36,0
chr10	74966023	.	C	CT	8181.62	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=19.400;DP=626;FS=9.292;HRun=2;HaplotypeScore=126.7180;InbreedingCoeff=0.9989;MQ=81.99;MQ0=0;MQRankSum=-7.263;QD=36.36;ReadPosRankSum=1.958;VQSLOD=3.5499;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:81.26:1121,81,0	0/0:13,0:13:39.13:0,39,545	0/0:26,0:26:72.02:0,72,961	0/0:27,0:27:78.23:0,78,1037	0/0:9,0:9:27.09:0,27,378	0/0:23,0:23:69.23:0,69,962	0/0:21,0:21:63.21:0,63,880	0/0:23,0:23:66.22:0,66,923	1/1:0,27:27:81.26:1134,81,0	1/1:2,20:22:58.63:834,59,0	1/1:0,8:8:21.05:260,21,0	1/1:1,22:23:66.21:894,66,0	1/1:2,25:27:71.28:1003,71,0	0/0:30,0:30:90.30:0,90,1249	0/0:26,0:26:78.26:0,78,1091	1/1:0,27:27:78.25:1089,78,0	0/0:31,0:31:87.29:0,87,1213	0/0:30,0:30:90.24:0,90,1214	0/0:19,0:19:57.13:0,57,755	0/0:17,0:17:45.11:0,45,603	0/0:45,0:45:99:0,132,1834	1/1:0,16:16:48.13:606,48,0	1/1:0,12:12:30.08:383,30,0	1/1:0,17:17:39.13:549,39,0	1/1:5,10:15:24.53:308,25,0	0/0:16,0:16:48.16:0,48,675	0/0:31,0:30:90.27:0,90,1232	0/0:14,0:14:42.14:0,42,587
chr10	74966097	.	A	AGTTT	6523.44	PASS	AB=0.647;AC=11;AF=0.196;AN=56;BaseQRankSum=2.907;DP=755;FS=4.246;HRun=0;HaplotypeScore=141.1065;InbreedingCoeff=0.8939;MQ=62.38;MQ0=0;MQRankSum=-5.640;QD=39.06;ReadPosRankSum=0.849;VQSLOD=5.1747;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:69.20:0,69,1115	0/0:8,0:8:15.05:0,15,249	0/0:27,0:24:41.99:0,42,563	0/0:25,0:25:33.11:0,33,529	0/0:30,0:30:84.01:0,84,1325	0/0:21,0:21:45.11:0,45,693	0/0:29,0:30:72.22:0,72,1143	0/0:38,0:38:60.08:0,60,798	0/0:23,0:23:66.21:0,66,1069	0/0:31,0:31:60.17:0,60,901	0/0:20,0:20:48.14:0,48,746	0/0:32,0:32:81.22:0,81,1263	0/0:37,0:37:96.19:0,96,1523	0/0:23,0:23:54.18:0,54,892	0/0:33,0:33:72.23:0,72,1169	0/0:23,0:22:45.13:0,45,697	0/0:25,0:25:54.18:0,54,895	0/0:18,0:18:27.07:0,27,421	1/1:11,8:18:30.03:545,30,0	1/1:11,26:37:28.59:1404,29,0	0/1:15,18:33:7.59:894,0,8	0/0:31,0:31:57.13:0,57,913	0/0:21,0:21:57.18:0,57,920	0/0:27,0:27:66.66:0,67,1021	0/0:31,0:31:69.20:0,69,1071	1/1:9,23:32:78.05:1665,78,0	1/1:13,23:37:72.25:1721,72,0	1/1:3,5:8:12.04:295,12,0
chr10	74966373	.	AGGGTTGGGGATTTAGCTCAGT	A	5928.85	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.408;DP=679;FS=14.677;HRun=0;HaplotypeScore=357.2793;InbreedingCoeff=0.9186;MQ=64.53;MQ0=5;MQRankSum=-6.924;QD=59.89;ReadPosRankSum=2.930;VQSLOD=3.0075;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:97.58:0,98,8055	0/0:11,0:11:24.08:0,24,2027	0/0:22,0:19:27.02:0,27,826	0/0:23,0:14:15.05:0,15,965	0/0:33,0:33:81.28:0,81,6534	0/0:19,0:19:42.14:0,42,2882	0/0:16,0:16:36.12:0,36,3211	0/0:36,0:36:66.23:0,66,4202	0/0:23,0:23:48.16:0,48,4551	0/0:24,0:24:48.16:0,48,3923	0/0:18,0:18:33.11:0,33,2604	0/0:34,0:34:75.26:0,75,6050	0/0:28,0:28:72.25:0,72,6038	0/0:25,0:25:57.20:0,57,5090	0/0:40,0:40:87.30:0,87,7488	0/0:26,0:26:60.21:0,60,5157	0/0:33,0:33:75.26:0,75,6446	0/0:16,0:16:31.35:0,31,2619	1/1:5,6:11:15.03:463,15,0	1/1:12,13:25:36.12:1775,36,0	1/1:15,1:16:3.01:91,3,0	0/0:27,0:27:54.19:0,54,4532	0/0:28,0:28:57.20:0,57,4607	0/0:36,0:36:84.29:0,84,7556	0/0:19,0:19:48.16:0,48,4355	1/1:9,12:20:33.11:1585,33,0	1/1:10,11:22:33.11:1847,33,0	1/1:2,2:4:3.01:168,3,0
chr10	74966780	.	AT	A	2525.40	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=9.686;DP=573;FS=2.828;HRun=10;HaplotypeScore=60.6977;InbreedingCoeff=0.8500;MQ=70.76;MQ0=2;MQRankSum=-2.909;QD=19.43;ReadPosRankSum=1.486;VQSLOD=4.6438;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:63.17:0,63,696	0/1:6,0:6:10.97:11,0,118	0/0:14,1:14:1.95:0,2,155	0/0:12,0:11:22.17:0,22,178	0/0:23,0:23:57.15:0,57,620	0/0:25,1:26:44.97:0,45,700	0/0:19,0:19:45.10:0,45,480	0/0:38,1:39:58.41:0,58,854	0/0:20,1:21:34.09:0,34,590	0/0:30,0:30:63.16:0,63,684	0/0:17,0:17:51.14:0,51,564	0/0:21,0:22:63:0,63,678	0/0:29,0:29:84.23:0,84,928	0/0:16,1:18:16.36:0,16,386	0/0:25,0:25:69.16:0,69,741	0/0:21,1:22:34.10:0,34,596	0/0:21,0:21:48.11:0,48,521	0/0:17,1:18:16.07:0,16,405	1/1:3,20:24:61.99:519,62,0	1/1:2,16:18:41.98:364,42,0	1/1:1,14:15:35.99:312,36,0	0/0:12,0:12:30.02:0,30,317	0/0:14,0:14:7.17:0,7,306	0/0:15,0:15:39.11:0,39,431	0/0:17,1:18:25.10:0,25,505	1/1:4,25:29:74.95:647,75,0	1/1:0,26:26:74.99:651,75,0	1/1:3,9:12:23.99:208,24,0
chr10	74967050	.	CTGGT	C	1877.16	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.919;DP=412;FS=44.515;HRun=0;HaplotypeScore=60.0226;InbreedingCoeff=0.9194;MQ=71.79;MQ0=5;MQRankSum=-0.307;QD=17.22;ReadPosRankSum=3.788;VQSLOD=1.4615;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:39.08:681,39,0	0/0:4,0:4:11.95:0,12,147	0/0:16,0:15:24.42:0,24,318	0/0:17,0:16:42.08:0,42,517	0/0:7,0:7:18.04:0,18,323	0/0:16,0:16:33:0,33,466	0/0:22,0:21:58.80:0,59,902	0/0:15,0:15:41.99:0,42,485	1/1:0,15:15:12.04:227,12,0	0/0:13,0:13:26.86:0,27,393	0/0:4,0:4:8.96:0,9,125	1/1:1,28:29:18.06:340,18,0	1/1:0,19:19:17.81:340,18,0	0/0:21,0:21:53.30:0,53,860	0/0:12,0:12:36.07:0,36,550	0/0:22,0:22:63.04:0,63,981	0/0:14,0:14:41.83:0,42,785	0/0:22,0:22:62.89:0,63,1224	0/0:13,0:12:13.60:0,14,246	0/0:7,0:7:11.46:0,11,148	0/0:26,0:25:56.97:0,57,946	1/1:3,0:3:8.83:64,9,0	1/1:4,0:4:8.99:75,9,0	1/1:1,18:19:18.06:340,18,0	0/0:11,0:10:18.02:0,18,269	0/0:17,0:17:39.07:0,39,665	0/0:22,0:22:62.92:0,63,833	0/0:2,0:2:6:0,6,105
chr10	74968472	.	T	TACACAC	29515.79	PASS	AB=0.971;AC=32;AF=0.571;AN=56;BaseQRankSum=-4.635;DP=730;FS=0.000;HRun=0;HaplotypeScore=151.4285;InbreedingCoeff=0.8509;MQ=65.69;MQ0=1;MQRankSum=-18.981;QD=63.34;ReadPosRankSum=3.367;VQSLOD=4.9377;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,20:28:33.11:1139,33,0	0/0:10,0:10:30.09:0,30,616	0/0:16,0:16:35.86:0,36,701	0/0:21,0:20:21.81:0,22,628	0/0:25,0:25:75.24:0,75,1651	0/0:31,0:31:84.24:0,84,1769	0/0:24,0:24:63.17:0,63,1296	0/0:34,0:34:78.24:0,78,1639	1/1:4,25:30:60.21:2069,60,0	1/1:4,34:40:99:3373,102,0	1/1:2,16:19:36.12:1240,36,0	1/1:5,28:35:75.26:2545,75,0	1/1:4,25:31:66.23:2206,66,0	0/0:21,0:21:60.19:0,60,1309	0/0:39,0:39:99:0,105,2358	1/1:3,25:28:57.20:1966,57,0	0/0:27,0:27:78.23:0,78,1652	0/0:16,0:16:39.05:0,39,832	0/1:15,0:16:56.43:463,0,56	1/1:37,0:37:25.26:1885,25,0	0/1:19,0:19:34.41:647,0,34	1/1:5,27:33:63.22:2172,63,0	1/1:4,33:37:83.58:2827,84,0	1/1:6,11:17:15.05:517,15,0	1/1:4,22:26:51.18:1759,51,0	1/1:23,0:23:25.22:1501,25,0	1/1:27,0:27:30.25:1811,30,0	1/1:19,0:19:35.19:1397,35,0
chr10	74968474	.	C	CACACAT	28623.78	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=5.813;DP=739;FS=2.213;HRun=0;HaplotypeScore=162.0234;InbreedingCoeff=0.9318;MQ=63.89;MQ0=1;MQRankSum=-18.406;QD=59.88;ReadPosRankSum=3.158;VQSLOD=5.4338;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:8.80:902,0,9	0/0:10,0:10:27.08:0,27,556	0/0:16,0:16:36.12:0,36,728	0/0:18,0:17:30.03:0,30,588	0/0:26,0:26:72.25:0,72,1593	0/0:31,0:31:75.26:0,75,1664	0/0:24,0:24:57.18:0,57,1222	0/0:34,0:34:72.24:0,72,1532	1/1:28,0:28:39.25:1696,39,0	1/1:40,0:40:98.44:2690,98,0	1/1:18,0:18:36.12:1042,36,0	1/1:33,0:33:75.26:2108,75,0	1/1:31,0:31:46.26:1807,46,0	0/0:20,0:20:57.20:0,57,1260	0/0:41,0:41:99:0,105,2283	1/1:28,0:27:60.21:1723,60,0	0/0:27,0:27:75.26:0,75,1631	0/0:14,0:14:39.09:0,39,815	1/1:10,7:20:39.10:983,39,0	1/1:11,27:39:69.24:2340,69,0	1/1:8,12:22:24.55:818,25,0	1/1:33,0:33:63.22:1816,63,0	1/1:35,0:35:83.54:2354,84,0	1/1:17,0:17:15.05:434,15,0	1/1:25,0:25:28.24:1440,28,0	1/1:9,19:30:75.26:2403,75,0	1/1:6,22:31:69.71:2329,70,0	1/1:2,17:19:51.18:1739,51,0
chr10	74970270	.	GAA	G	6379.31	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=6.653;DP=482;FS=21.661;HRun=12;HaplotypeScore=61.6864;InbreedingCoeff=0.9536;MQ=64.37;MQ0=9;MQRankSum=0.773;QD=21.05;ReadPosRankSum=6.429;VQSLOD=2.0377;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:66.13:671,66,0	0/0:7,0:7:18:0,18,221	0/0:13,0:8:20.94:0,21,229	0/0:7,0:3:5.99:0,6,67	0/0:13,0:14:35.97:0,36,452	0/0:14,0:14:36.12:0,36,532	0/0:13,0:13:35.90:0,36,461	0/0:34,0:34:80.73:0,81,1124	1/1:0,16:15:33.07:336,33,0	1/1:4,14:18:23.81:290,24,0	1/1:0,12:12:32.55:313,33,0	1/1:4,9:13:27.04:275,27,0	1/1:5,14:18:33.06:335,33,0	0/0:11,0:12:29.57:0,30,390	0/0:14,0:15:39.12:0,39,549	1/1:3,20:23:45.09:458,45,0	0/0:26,0:26:57.19:0,57,841	0/0:21,0:22:58.17:0,58,737	1/1:4,16:19:38.66:430,39,0	1/1:3,18:21:56.86:559,57,0	1/1:1,16:18:42.06:427,42,0	1/1:3,7:10:18.03:183,18,0	1/1:1,15:16:35.98:366,36,0	1/1:2,18:20:43.24:455,43,0	1/1:3,7:10:2.44:192,2,0	1/1:5,12:17:36.04:359,36,0	1/1:3,21:24:50.90:518,51,0	1/1:1,10:10:21.05:214,21,0
chr10	74974025	.	T	TAA	10303.97	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-15.942;DP=801;FS=2.559;HRun=2;HaplotypeScore=90.0976;InbreedingCoeff=1.0000;MQ=81.89;MQ0=2;MQRankSum=-4.130;QD=47.27;ReadPosRankSum=1.602;VQSLOD=4.8019;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,33:34:93.28:1706,93,0	0/0:13,0:13:39.13:0,39,574	0/0:22,0:22:54.16:0,54,744	0/0:22,0:22:63.20:0,63,900	0/0:27,0:27:78.26:0,78,1148	0/0:35,0:35:90.28:0,90,1303	0/0:25,0:25:75.24:0,75,1085	0/0:42,0:42:99:0,120,1695	1/1:2,24:26:66.23:1221,66,0	0/0:29,0:29:87.29:0,87,1278	0/0:20,0:20:60.20:0,60,883	1/1:0,29:30:78.27:1461,78,0	1/1:2,20:24:57.20:1068,57,0	0/0:31,0:31:78.25:0,78,1128	0/0:54,0:54:99:0,160,2319	0/0:39,0:39:99:0,114,1676	0/0:29,0:29:84.28:0,84,1237	0/0:17,0:17:51.17:0,51,750	0/0:26,0:26:72.67:0,73,1013	0/0:28,0:28:81.26:0,81,1173	0/0:36,0:36:99:0,105,1523	1/1:5,33:38:99:1765,102,0	1/1:3,25:29:69.24:1284,69,0	1/1:2,33:35:96.33:1799,96,0	0/0:22,0:22:60.20:0,60,883	0/0:22,0:22:66.21:0,66,955	0/0:31,0:31:93.31:0,93,1361	0/0:13,0:13:39.13:0,39,572
chr10	74975102	.	ACAAACGTTG	A	10687.88	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.689;DP=763;FS=0.000;HRun=0;HaplotypeScore=215.1477;InbreedingCoeff=0.9982;MQ=84.46;MQ0=0;MQRankSum=-15.806;QD=72.22;ReadPosRankSum=2.280;VQSLOD=4.6095;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,4959	0/0:17,0:17:51.18:0,51,2468	0/0:25,0:25:69.24:0,69,2808	0/0:29,0:29:87.30:0,87,3367	0/0:32,0:32:96.33:0,96,4460	0/0:35,0:35:99:0,102,4704	0/0:23,0:23:66.23:0,66,2984	0/0:33,0:33:90.30:0,90,3858	0/0:24,0:24:69.24:0,69,3162	0/0:32,0:32:90.31:0,90,4168	0/0:30,0:30:84.29:0,84,4059	0/0:23,0:23:63.22:0,63,2858	0/0:26,0:26:72.25:0,72,3134	0/0:30,0:30:84.26:0,84,3704	0/0:29,0:29:87.30:0,87,4192	0/0:34,0:34:99:0,102,4951	0/0:26,0:25:75.26:0,75,3463	0/0:13,0:13:36.12:0,36,1493	1/1:2,15:17:45.15:1393,45,0	1/1:0,27:27:66.23:2044,66,0	1/1:5,15:20:18.06:558,18,0	0/0:27,0:27:81.26:0,81,3548	0/0:37,0:37:99:0,111,5132	0/0:24,0:24:69.24:0,69,3143	0/0:30,0:30:87.30:0,87,4018	1/1:3,29:32:87.26:2606,87,0	1/1:2,38:40:99:3160,102,0	1/1:0,12:12:30.10:927,30,0
chr10	74976125	.	CCT	C	6315.09	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.066;DP=766;FS=2.400;HRun=0;HaplotypeScore=121.4684;InbreedingCoeff=0.9996;MQ=82.90;MQ0=1;MQRankSum=-3.294;QD=39.97;ReadPosRankSum=2.351;VQSLOD=6.3025;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:99:0,129,2363	0/0:14,0:14:42.14:0,42,786	0/0:38,0:37:99:0,108,1897	0/0:26,0:26:75.26:0,75,1368	0/0:33,0:33:99:0,99,1825	0/0:25,0:25:75.22:0,75,1340	0/0:16,0:16:48.16:0,48,871	0/0:42,0:42:99:0,126,2259	0/0:31,0:31:75.24:0,75,1373	0/0:25,0:25:75.26:0,75,1405	0/0:22,0:22:66.22:0,66,1187	0/0:24,0:24:66.23:0,66,1236	0/0:28,0:28:78.27:0,78,1421	0/0:25,0:25:72.25:0,72,1349	0/0:42,0:42:99:0,126,2305	0/0:29,0:29:78.27:0,78,1459	0/0:23,0:23:63.22:0,63,1160	0/0:8,0:8:24.04:0,24,413	1/1:1,27:28:81.27:1181,81,0	1/1:0,19:19:48.12:682,48,0	1/1:1,40:41:99:1544,105,0	0/0:23,0:23:66.23:0,66,1236	0/0:28,0:28:72.25:0,72,1348	0/0:33,0:33:90.31:0,90,1683	0/0:23,0:23:63.21:0,63,1149	1/1:1,23:24:69.23:1009,69,0	1/1:2,27:29:78.26:1148,78,0	1/1:0,17:17:51.17:751,51,0
chr10	74976159	.	CCA	C	12343.37	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=9.276;DP=812;FS=1.529;HRun=0;HaplotypeScore=117.6483;InbreedingCoeff=0.9991;MQ=72.38;MQ0=3;MQRankSum=-1.501;QD=37.40;ReadPosRankSum=4.177;VQSLOD=6.6469;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,50:50:99:1723,117,0	0/0:13,0:13:39.13:0,39,718	0/0:34,0:31:80.05:0,80,1466	0/0:45,0:40:99:0,110,1830	0/0:32,0:32:93.28:0,93,1662	0/0:25,0:25:75.26:0,75,1386	0/0:24,0:24:72.25:0,72,1335	0/0:38,0:38:99:0,108,2008	1/1:0,30:30:75.25:1104,75,0	1/1:0,35:35:99:1521,105,0	1/1:0,28:28:78.26:1149,78,0	1/1:1,20:21:57.19:839,57,0	1/1:1,26:27:72.03:1060,72,0	0/0:33,0:33:96.32:0,96,1756	0/0:57,0:57:99:0,166,3079	1/1:2,28:30:72.24:1060,72,0	0/0:23,0:23:69.21:0,69,1254	0/0:10,0:10:27.09:0,27,505	0/0:24,0:24:63.17:0,63,1113	0/0:33,0:33:99:0,99,1842	0/0:32,0:32:93.32:0,93,1739	1/1:2,29:31:72.24:1060,72,0	1/1:0,29:29:69.23:1016,69,0	1/1:0,26:25:69.23:1016,69,0	1/1:1,21:21:54.18:795,54,0	0/0:23,1:24:28.05:0,28,1248	0/0:28,0:28:84.27:0,84,1540	0/0:7,0:7:21.07:0,21,393
chr10	74977209	.	TA	T	2738.67	PASS	AB=0.615;AC=21;AF=0.375;AN=56;BaseQRankSum=10.862;DP=673;FS=0.000;HRun=14;HaplotypeScore=70.5235;InbreedingCoeff=0.8517;MQ=74.61;MQ0=3;MQRankSum=1.084;QD=10.95;ReadPosRankSum=4.447;VQSLOD=3.3687;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,19:26:51.27:330,51,0	0/0:12,1:13:12.43:0,12,252	0/0:24,1:15:10.46:0,10,113	0/0:16,0:12:5.83:0,6,59	0/0:34,0:34:84.93:0,85,765	0/0:27,1:28:33.44:0,33,443	0/0:14,1:15:6.31:0,6,184	0/0:32,3:37:18.27:0,18,531	1/1:6,7:14:22.83:150,23,0	1/1:10,23:34:69.32:446,69,0	1/1:5,14:19:41.38:274,41,0	1/1:4,18:23:34.74:232,35,0	1/1:8,19:28:29.99:316,30,0	0/0:22,3:25:32.20:0,32,414	0/0:30,2:32:33.66:0,34,554	1/1:10,13:23:14.31:222,14,0	0/0:19,0:21:43.11:0,43,371	0/0:12,1:13:9.45:0,9,225	0/0:23,0:23:42.01:0,42,375	0/0:28,1:31:50.29:0,50,593	0/0:9,0:12:6.16:0,6,194	0/1:6,8:16:0.05:124,0,0	1/1:3,21:25:2.86:299,3,0	1/1:2,14:16:38.66:267,39,0	1/1:9,17:26:41.53:288,42,0	0/0:38,5:45:6.57:0,7,670	0/0:34,3:39:45.37:0,45,644	0/0:14,0:14:10.99:0,11,232
chr10	74978312	.	T	TA	9362.72	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-16.445;DP=716;FS=2.007;HRun=7;HaplotypeScore=63.5872;InbreedingCoeff=0.9999;MQ=82.86;MQ0=0;MQRankSum=-0.680;QD=32.17;ReadPosRankSum=2.669;VQSLOD=4.8077;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:27:69.18:818,69,0	0/0:11,0:11:33.04:0,33,315	0/0:23,0:23:42.13:0,42,478	0/0:18,0:18:47.96:0,48,436	0/0:34,0:34:93.14:0,93,898	0/0:30,0:30:81.13:0,81,782	0/0:23,0:23:63.07:0,63,601	0/0:37,0:37:99:0,102,976	1/1:2,19:21:51.16:614,51,0	1/1:4,30:34:93.28:1120,93,0	1/1:1,26:27:69.21:833,69,0	1/1:3,24:27:72.22:870,72,0	1/1:2,21:23:60.18:724,60,0	0/0:25,0:25:75.12:0,75,724	0/0:29,0:29:75.12:0,75,724	1/1:1,33:34:90.28:1087,90,0	0/0:22,0:22:57.09:0,57,550	0/0:26,0:26:69.06:0,69,657	0/0:17,0:17:45.06:0,45,430	0/0:29,0:29:81.13:0,81,782	0/0:20,0:20:54.05:0,54,508	1/1:0,22:22:63.19:761,63,0	1/1:1,29:30:84.26:1015,84,0	1/1:2,11:13:33.10:397,33,0	1/1:1,32:33:93.29:1124,93,0	0/0:29,1:30:44.83:0,45,700	0/0:39,0:39:99:0,105,1013	0/0:12,0:12:36.06:0,36,348
chr10	74978705	.	TA	T	3561.32	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=5.119;DP=650;FS=7.073;HRun=9;HaplotypeScore=84.3806;InbreedingCoeff=0.9940;MQ=81.22;MQ0=0;MQRankSum=-1.500;QD=21.98;ReadPosRankSum=1.446;VQSLOD=4.3412;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:25:59.99:541,60,0	0/0:6,0:6:12.02:0,12,128	0/0:14,0:14:29.91:0,30,313	0/0:20,0:20:31.43:0,31,378	0/0:39,0:41:99:0,108,1198	0/0:31,0:32:84.08:0,84,949	0/0:10,0:10:30.08:0,30,337	0/0:30,0:30:84.25:0,84,969	1/1:3,17:20:45.02:412,45,0	0/0:28,0:28:78.23:0,78,900	0/0:28,0:28:75.21:0,75,855	1/1:1,25:26:69.04:632,69,0	1/1:3,22:25:59.90:549,60,0	0/0:28,0:28:75.20:0,75,852	0/0:25,0:25:69.21:0,69,796	0/0:29,0:30:56.84:0,57,863	0/0:20,0:20:54.16:0,54,623	0/0:15,0:14:33.08:0,33,370	0/0:21,0:21:57.04:0,57,638	0/0:26,0:26:66.20:0,66,762	0/0:18,0:18:51.14:0,51,580	1/1:1,17:18:45.02:412,45,0	1/1:2,20:22:57.03:522,57,0	1/1:4,22:26:54.03:494,54,0	0/0:21,0:21:54.16:0,54,623	0/0:21,0:21:51.15:0,51,589	0/0:34,0:34:81.24:0,81,935	0/0:20,0:20:35.77:0,36,602
chr10	74979016	.	GCT	G	7279.23	PASS	AB=0.905;AC=23;AF=0.411;AN=56;BaseQRankSum=14.111;DP=621;FS=0.682;HRun=0;HaplotypeScore=76.2401;InbreedingCoeff=0.9260;MQ=76.33;MQ0=0;MQRankSum=-1.951;QD=28.21;ReadPosRankSum=2.840;VQSLOD=6.2428;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:27:66.21:833,66,0	0/0:11,0:11:27.09:0,27,446	0/0:27,0:26:50.30:0,50,771	0/0:28,0:23:54.15:0,54,821	0/0:22,0:22:66.21:0,66,1072	0/0:32,0:32:90.31:0,90,1496	0/0:25,0:25:63.22:0,63,1048	0/0:27,0:26:72.25:0,72,1192	1/1:1,14:15:39.12:492,39,0	1/1:3,28:31:78.23:969,78,0	1/1:2,18:20:51.16:644,51,0	1/1:3,17:20:51.16:644,51,0	1/1:4,24:28:69.22:871,69,0	0/0:18,0:18:39.13:0,39,648	0/0:24,0:24:60.17:0,60,967	1/1:9,21:30:57.18:719,57,0	0/0:22,0:22:60.20:0,60,979	0/0:12,0:12:27.09:0,27,449	0/0:17,0:17:42.13:0,42,657	0/0:21,0:21:51.17:0,51,845	0/0:32,0:32:90.28:0,90,1430	1/1:2,10:12:30.10:379,30,0	1/1:1,11:12:33.11:417,33,0	1/1:3,24:27:63.20:795,63,0	1/1:2,15:17:39.12:492,39,0	0/1:17,2:19:24.57:25,0,697	0/0:30,0:30:78.27:0,78,1284	0/0:15,0:15:39.13:0,39,648
chr10	74980052	.	G	GC	20541.37	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-15.562;DP=730;FS=0.609;HRun=0;HaplotypeScore=67.4720;InbreedingCoeff=0.9805;MQ=80.26;MQ0=0;MQRankSum=-3.584;QD=41.92;ReadPosRankSum=2.706;VQSLOD=5.5640;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,35:36:96.33:1531,96,0	0/0:6,0:6:18.06:0,18,250	0/0:21,0:21:53.28:0,53,708	0/0:14,0:14:13.26:0,13,230	0/0:27,0:27:78.23:0,78,1040	0/0:27,0:27:81.23:0,81,1079	0/0:28,0:28:84.22:0,84,1091	0/0:23,0:23:60.19:0,60,824	1/1:0,24:24:68.93:1101,69,0	1/1:0,32:32:96.31:1489,96,0	1/1:0,23:23:66.16:1018,66,0	1/1:0,31:31:81.28:1293,81,0	1/1:1,38:39:99:1623,102,0	0/0:31,0:31:90.28:0,90,1224	0/0:33,0:33:99:0,99,1320	1/1:0,40:40:99:1673,105,0	0/0:20,0:20:60.19:0,60,821	0/0:10,0:10:30.10:0,30,419	1/1:1,30:31:90.19:1234,90,0	1/1:1,28:29:78.20:1204,78,0	1/1:0,17:17:48.16:766,48,0	1/1:1,24:25:69.24:1100,69,0	1/1:0,24:24:54.18:862,54,0	1/1:0,33:33:84.29:1338,84,0	1/1:1,23:24:57.19:910,57,0	1/1:0,31:31:93.32:1486,93,0	1/1:0,46:46:99:1819,114,0	1/1:0,5:5:6.02:96,6,0
chr10	74980690	.	G	GAAA	14510.13	PASS	AB=0.931;AC=23;AF=0.411;AN=56;BaseQRankSum=-12.666;DP=699;FS=3.506;HRun=5;HaplotypeScore=93.4866;InbreedingCoeff=0.9251;MQ=78.43;MQ0=0;MQRankSum=-7.076;QD=47.57;ReadPosRankSum=4.143;VQSLOD=4.3076;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,23:31:69.24:1454,69,0	0/0:8,0:8:21.07:0,21,310	0/0:22,0:22:47.70:0,48,694	0/0:14,0:14:29.66:0,30,374	0/0:30,0:30:75.21:0,75,1064	0/0:26,0:26:66.22:0,66,972	0/0:30,0:30:84.26:0,84,1218	0/0:38,0:38:99:0,99,1443	1/1:4,24:28:69.24:1505,69,0	1/1:3,27:30:78.27:1687,78,0	1/1:1,19:20:51.17:1056,51,0	1/1:4,19:23:57.20:1244,57,0	1/1:3,21:25:66.23:1390,66,0	0/0:21,0:21:57.16:0,57,818	0/0:41,0:41:99:0,114,1658	1/1:4,22:28:69.24:1482,69,0	0/0:42,0:42:99:0,123,1767	0/0:13,0:13:27.08:0,27,398	0/0:13,0:13:30.10:0,30,441	0/0:23,0:23:60.18:0,60,858	0/0:26,0:25:63.19:0,63,909	1/1:1,18:20:51.17:1087,51,0	1/1:2,16:19:45.15:981,45,0	1/1:5,21:26:51.11:1113,51,0	1/1:2,26:28:69.24:1453,69,0	0/1:25,2:26:58.51:59,0,883	0/0:39,0:39:99:0,105,1527	0/0:8,0:8:24.08:0,24,354
chr10	74984369	.	GAA	G	10346.92	PASS	AB=0.933;AC=35;AF=0.625;AN=56;BaseQRankSum=17.059;DP=588;FS=2.826;HRun=8;HaplotypeScore=91.9029;InbreedingCoeff=0.9221;MQ=74.09;MQ0=3;MQRankSum=-0.918;QD=27.59;ReadPosRankSum=4.880;VQSLOD=4.6877;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:26:51.15:621,51,0	0/0:11,0:11:27.09:0,27,457	0/0:8,0:8:12.04:0,12,194	0/1:13,0:14:7.35:7,0,316	0/0:24,0:24:69.24:0,69,1167	0/0:29,0:29:81.28:0,81,1367	0/0:17,0:17:45.15:0,45,758	0/0:43,0:43:99:0,120,1958	1/1:1,13:14:33.10:402,33,0	1/1:3,16:19:48.14:574,48,0	1/1:1,27:28:72.21:874,72,0	1/1:1,16:17:45.14:549,45,0	1/1:1,27:28:72.22:878,72,0	0/0:16,0:16:45.15:0,45,761	0/0:24,0:24:72.20:0,72,1097	1/1:2,24:25:66.20:800,66,0	0/0:18,0:18:45.15:0,45,759	0/0:23,0:23:69.20:0,69,1111	1/1:1,18:19:51.10:573,51,0	1/1:4,32:36:90.27:1095,90,0	1/1:0,19:19:33.10:402,33,0	1/1:1,5:6:9.02:110,9,0	1/1:2,15:17:39.12:475,39,0	1/1:0,15:15:33.10:402,33,0	1/1:0,27:27:60.18:731,60,0	1/1:3,22:25:66.18:791,66,0	1/1:1,26:27:66.20:805,66,0	1/1:2,9:10:21.06:256,21,0
chr10	74985801	.	ATCT	A	61.72	PASS	AB=0.891;AC=7;AF=0.140;AN=50;BaseQRankSum=3.994;DP=219;FS=43.637;HRun=0;HaplotypeScore=53.2768;InbreedingCoeff=-0.1920;MQ=51.78;MQ0=26;MQRankSum=-2.154;QD=0.66;ReadPosRankSum=-1.364;VQSLOD=-0.1167;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:11.99:0,12,108	0/0:3,0:3:9.03:0,9,181	0/1:26,0:7:5.32:5,0,20	0/1:28,0:4:13.59:14,0,39	0/0:7,1:8:11.49:0,11,243	0/0:5,1:6:12.51:0,13,244	./.	0/0:20,0:15:7.11:0,7,720	0/0:5,0:5:11.81:0,12,100	0/1:6,0:6:6.58:7,0,222	0/0:7,0:6:11.87:0,12,146	0/0:2,0:2:3:0,3,29	0/0:4,0:4:9.02:0,9,114	0/0:4,0:4:12.04:0,12,245	0/0:3,0:3:9.03:0,9,190	0/0:1,0:1:3.01:0,3,36	0/0:19,0:18:25.88:0,26,793	0/0:18,0:12:32.85:0,33,617	0/0:8,0:7:21.07:0,21,385	0/0:4,0:4:8.72:0,9,179	./.	./.	0/0:2,0:2:2.62:0,3,18	0/0:4,0:3:5.85:0,6,50	0/1:4,3:7:98.57:115,0,99	0/1:10,1:11:0.35:0,0,467	0/1:6,1:7:15.87:16,0,191	0/1:5,2:7:13.63:14,0,211
chr10	74985811	.	AAAAAC	A	741.97	PASS	AB=1.000;AC=23;AF=0.442;AN=52;BaseQRankSum=1.244;DP=261;FS=6.122;HRun=0;HaplotypeScore=68.0252;InbreedingCoeff=0.3948;MQ=53.92;MQ0=16;MQRankSum=-3.584;QD=5.94;ReadPosRankSum=-1.051;VQSLOD=0.4780;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:11.66:70,12,0	0/0:3,0:3:9.01:0,9,176	0/1:37,0:10:13.68:14,0,94	0/0:32,0:4:5.96:0,6,45	0/0:8,0:8:24.08:0,24,411	0/0:7,0:7:14.91:0,15,197	./.	0/0:24,0:21:25.76:0,26,804	0/1:8,0:8:48.50:60,0,48	1/1:6,1:7:14.26:162,14,0	1/1:7,1:7:11.95:146,12,0	1/1:4,0:4:2.96:20,3,0	1/1:5,0:5:0.37:57,0,0	0/0:4,0:4:11.71:0,12,216	0/0:5,0:5:12.02:0,12,237	1/1:2,0:2:3.01:37,3,0	0/0:23,0:22:39.93:0,40,931	0/0:16,0:12:32.99:0,33,670	0/1:9,0:8:18.67:19,0,168	0/0:3,0:3:2.78:0,3,39	0/0:2,0:1:3.01:0,3,32	./.	1/1:1,1:2:6.01:83,6,0	1/1:3,1:3:6.02:89,6,0	1/1:5,1:6:12.46:131,12,0	0/1:12,0:12:21.56:22,0,214	0/0:9,0:9:19.61:0,20,276	0/1:14,0:14:7.02:7,0,264
chr10	74985812	.	AAAAC	A	991.89	PASS	AB=1.000;AC=23;AF=0.442;AN=52;BaseQRankSum=1.599;DP=259;FS=5.948;HRun=0;HaplotypeScore=63.3141;InbreedingCoeff=0.4191;MQ=54.08;MQ0=16;MQRankSum=-3.468;QD=8.00;ReadPosRankSum=-1.026;VQSLOD=1.4365;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:12.02:118,12,0	0/0:3,0:3:9.01:0,9,152	0/1:38,0:10:16.26:16,0,80	0/0:30,0:4:5.93:0,6,41	0/0:8,0:8:24.05:0,24,323	0/0:7,0:7:14.83:0,15,153	./.	0/0:24,0:21:23.38:0,23,671	0/1:7,0:7:36.54:96,0,37	1/1:1,6:7:14.08:190,14,0	1/1:2,6:7:11.95:131,12,0	1/1:4,0:4:3.01:31,3,0	1/1:5,0:5:10.27:104,10,0	0/0:4,0:4:11.53:0,12,178	0/0:5,0:5:12.02:0,12,201	1/1:0,2:2:3.01:50,3,0	0/0:23,0:22:38.53:0,39,755	0/0:16,0:12:32.83:0,33,540	0/1:9,0:8:25.75:26,0,117	0/0:3,0:3:2.78:0,3,33	0/0:2,0:1:2.94:0,3,18	./.	1/1:2,0:2:6.01:70,6,0	1/1:2,2:3:6.02:92,6,0	1/1:4,2:6:17.04:200,17,0	0/1:12,0:12:37.32:37,0,134	0/0:9,0:9:12:0,12,193	0/1:14,0:14:10.39:10,0,145
chr10	74985813	.	AAAC	A	1098.32	PASS	AB=0.923;AC=24;AF=0.462;AN=52;BaseQRankSum=1.413;DP=259;FS=3.250;HRun=0;HaplotypeScore=59.4775;InbreedingCoeff=0.3763;MQ=56.32;MQ0=16;MQRankSum=-2.311;QD=8.26;ReadPosRankSum=-1.747;VQSLOD=1.7960;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:6:12.04:177,12,0	0/0:3,0:3:9.01:0,9,129	0/1:38,0:10:21.08:21,0,53	0/0:31,0:4:5.77:0,6,34	0/0:8,0:8:23.87:0,24,239	0/0:7,0:7:13.48:0,13,105	./.	0/0:25,0:22:17.04:0,17,528	0/1:1,6:7:24.75:136,0,25	1/1:7,0:7:14.40:146,14,0	1/1:8,0:7:11.95:112,12,0	1/1:0,4:4:2.54:44,3,0	1/1:1,4:5:11.99:153,12,0	0/0:4,0:4:11.40:0,11,142	0/0:5,0:5:12.02:0,12,167	1/1:2,0:2:3.01:37,3,0	0/0:23,0:22:36.86:0,37,580	0/0:16,0:12:30.34:0,30,410	0/1:9,0:8:44.52:45,0,64	0/0:2,0:2:2.86:0,3,23	0/0:2,0:1:2.04:0,2,6	./.	1/1:2,0:2:6.01:63,6,0	1/1:4,0:3:6.02:73,6,0	1/1:6,0:6:17.99:177,18,0	0/1:12,0:12:49.98:50,0,56	0/1:9,0:9:0.72:1,0,113	0/1:14,0:14:36.66:40,0,37
chr10	74985815	.	AC	A	1341.62	PASS	AB=0.984;AC=36;AF=0.692;AN=52;BaseQRankSum=4.295;DP=259;FS=6.810;HRun=1;HaplotypeScore=51.6653;InbreedingCoeff=0.1893;MQ=58.51;MQ0=15;MQRankSum=-3.494;QD=6.24;ReadPosRankSum=-0.743;VQSLOD=0.0203;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:11.99:99,12,0	0/0:3,0:3:9:0,9,88	0/1:38,1:11:31.71:32,0,34	0/0:28,4:4:5.65:0,6,32	0/1:8,0:8:16.73:17,0,69	0/1:6,0:6:27.49:27,0,33	./.	0/1:23,1:22:23.03:23,0,257	0/1:7,0:7:2.54:79,0,3	1/1:7,0:7:14.38:96,14,0	1/1:8,0:7:11.91:86,12,0	1/1:4,0:4:3:25,3,0	1/1:5,0:5:11.96:95,12,0	0/0:3,1:4:6.16:0,6,67	0/0:5,0:5:11.92:0,12,101	1/1:2,0:2:2.99:24,3,0	0/1:23,0:22:2.99:3,0,266	0/1:14,1:11:15.30:15,0,163	1/1:10,0:9:21.13:131,21,0	1/1:1,0:1:1.55:4,2,0	1/1:2,0:1:3:25,3,0	./.	1/1:2,0:2:5.99:50,6,0	1/1:4,0:3:5.98:46,6,0	1/1:6,0:6:17.62:126,18,0	1/1:5,8:13:27.16:179,27,0	0/1:9,0:9:1.53:47,0,2	1/1:14,0:14:36.15:267,36,0
chr10	74988042	.	ACG	A	1101.86	PASS	AB=0.941;AC=23;AF=0.411;AN=56;BaseQRankSum=10.231;DP=475;FS=12.829;HRun=0;HaplotypeScore=111.9271;InbreedingCoeff=0.7518;MQ=65.73;MQ0=4;MQRankSum=-3.952;QD=5.51;ReadPosRankSum=1.809;VQSLOD=2.5416;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:17.92:137,18,0	0/0:7,0:7:12.02:0,12,165	1/1:5,0:5:0.89:2,1,0	0/0:9,0:7:1.94:0,2,16	0/0:14,0:14:30.10:0,30,493	0/0:25,0:25:60.16:0,60,900	0/0:20,0:20:42.11:0,42,633	0/0:22,0:21:44.50:0,44,597	0/1:15,1:16:8.31:106,0,8	1/1:5,10:14:32.97:365,33,0	1/1:3,11:14:12.04:153,12,0	1/1:19,0:19:5.68:28,6,0	1/1:20,0:20:19.89:99,20,0	0/0:14,0:13:30.07:0,30,438	0/0:14,0:14:27.07:0,27,370	1/1:4,4:8:6:63,6,0	0/0:33,0:33:72.11:0,72,1073	0/0:25,0:25:69.20:0,69,1058	0/0:20,0:20:26.81:0,27,231	0/0:9,0:9:3:0,3,25	0/0:15,0:15:8.90:0,9,66	1/1:16,0:16:5.68:28,6,0	1/1:19,0:19:14.20:71,14,0	1/1:25,0:25:8.52:43,9,0	1/1:15,3:18:18.04:205,18,0	0/0:18,1:19:28.43:0,28,158	0/0:22,0:22:0.89:0,1,2	0/0:7,0:7:11.75:0,12,75
chr10	74988050	.	GCGCGCACACACGCACACACACACACACACA	G	6828.21	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=8.729;DP=480;FS=22.257;HRun=0;HaplotypeScore=286.2440;InbreedingCoeff=0.6723;MQ=57.01;MQ0=7;MQRankSum=-5.082;QD=37.31;ReadPosRankSum=3.852;VQSLOD=1.5543;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:21.05:424,21,0	0/0:8,0:8:15.05:0,15,748	0/0:2,0:2:2.90:0,3,16	0/0:4,0:2:2.04:0,2,56	0/0:13,0:13:36.11:0,36,2620	0/0:27,0:27:66.23:0,66,3389	0/0:25,0:25:63.67:0,64,3378	0/0:22,0:19:57.32:0,57,1451	1/1:12,3:15:10.09:978,10,0	0/1:13,0:12:99:131,0,111	0/1:12,0:12:15.48:15,0,43	1/1:0,20:20:7.59:555,8,0	1/1:0,17:18:24.08:1728,24,0	0/0:16,0:15:45.14:0,45,3939	0/0:16,0:16:39.12:0,39,3418	0/1:8,0:8:0.43:1,0,0	0/0:40,0:40:90.31:0,90,7310	0/0:33,0:33:92.12:0,92,8606	0/0:14,0:14:33.99:0,34,833	0/0:10,0:10:6.01:0,6,75	0/0:17,0:17:12.03:0,12,357	1/1:3,15:17:9.03:572,9,0	1/1:0,19:19:15.05:1204,15,0	1/1:0,22:22:9.03:722,9,0	1/1:14,0:13:6.62:499,7,0	0/0:25,0:25:55.08:0,55,2281	0/0:18,0:18:9:0,9,305	0/0:7,0:7:15.03:0,15,394
chr10	74988052	.	GCGCACA	G	2468.83	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=12.101;DP=467;FS=22.246;HRun=0;HaplotypeScore=129.0122;InbreedingCoeff=0.6119;MQ=55.90;MQ0=7;MQRankSum=-3.059;QD=9.76;ReadPosRankSum=4.158;VQSLOD=1.1760;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:14.52:118,15,0	0/0:8,0:8:15.04:0,15,220	0/0:1,0:1:1.25:0,1,3	0/0:4,0:2:1.38:0,1,53	0/0:13,0:13:33.11:0,33,814	0/0:25,0:25:66.20:0,66,1445	0/0:25,0:25:56.73:0,57,1021	0/0:22,0:19:50.11:0,50,867	1/1:15,0:15:5.05:194,5,0	1/1:11,1:11:33.06:399,33,0	1/1:11,1:12:12.04:146,12,0	1/1:20,0:20:5.96:84,6,0	1/1:18,0:18:21.07:294,21,0	0/0:16,0:15:45.14:0,45,930	0/0:15,0:15:36.12:0,36,880	1/1:8,0:8:6.02:82,6,0	0/0:40,0:40:90.25:0,90,2215	0/0:35,0:35:94.20:0,94,2361	0/1:13,0:13:14.54:75,0,15	0/0:10,0:10:3:0,3,25	0/1:17,0:17:37.89:57,0,38	1/1:16,0:15:6.02:84,6,0	1/1:19,0:19:15.05:210,15,0	1/1:22,0:22:9.03:126,9,0	1/1:8,3:10:18.06:308,18,0	1/1:25,0:25:47.15:418,47,0	1/1:18,0:18:3.01:37,3,0	0/1:5,0:5:10.02:35,0,10
chr10	74988054	.	GCACACA	G	2423.99	PASS	AB=1.000;AC=30;AF=0.556;AN=54;BaseQRankSum=10.544;DP=457;FS=14.052;HRun=0;HaplotypeScore=127.0705;InbreedingCoeff=0.7077;MQ=56.02;MQ0=7;MQRankSum=-3.452;QD=9.93;ReadPosRankSum=3.124;VQSLOD=1.8994;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:5.76:16,0,6	0/0:8,0:8:12.01:0,12,172	0/0:1,0:1:2.68:0,3,11	0/0:4,0:2:3.01:0,3,38	0/0:12,0:12:33.10:0,33,700	0/0:26,0:26:60.17:0,60,1162	0/0:26,0:25:58.36:0,58,895	0/0:22,0:19:54.76:0,55,622	0/1:15,0:15:10.08:124,0,10	1/1:12,0:11:24.35:162,24,0	1/1:12,0:12:11.16:51,11,0	1/1:20,0:20:5.97:84,6,0	1/1:18,0:18:21.07:294,21,0	0/0:16,0:15:45.14:0,45,908	0/0:15,0:15:36.11:0,36,812	1/1:6,0:6:5.80:33,6,0	0/0:38,0:38:84.29:0,84,2068	0/0:36,0:36:97.16:0,97,2236	1/1:4,0:13:33.04:287,33,0	./.	1/1:16,0:16:6.02:119,6,0	1/1:16,0:15:6.02:84,6,0	1/1:19,0:19:15.05:210,15,0	1/1:22,0:22:9.03:126,9,0	1/1:8,0:8:17.57:181,18,0	1/1:2,22:25:48.07:687,48,0	1/1:1,0:16:3.01:56,3,0	1/1:4,0:4:9.01:107,9,0
chr10	74988060	.	ACG	A	859.07	PASS	AB=0.922;AC=26;AF=0.481;AN=54;BaseQRankSum=9.871;DP=448;FS=5.074;HRun=0;HaplotypeScore=111.3905;InbreedingCoeff=0.4617;MQ=52.89;MQ0=6;MQRankSum=-3.140;QD=3.28;ReadPosRankSum=0.989;VQSLOD=2.2826;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:14.98:123,15,0	0/0:8,0:8:1.68:0,2,78	./.	0/0:3,0:1:2.98:0,3,22	0/0:13,0:13:17.65:0,18,292	0/0:26,0:26:41.24:0,41,414	0/1:26,0:25:2.23:2,0,238	0/0:19,0:16:43.80:0,44,273	1/1:13,0:13:20.45:134,20,0	0/1:9,0:9:2.01:14,0,2	0/0:12,0:12:9:0,9,29	1/1:20,0:20:5.68:29,6,0	1/1:19,0:19:19.89:99,20,0	0/0:16,0:15:15.62:0,16,379	0/1:14,0:14:9.52:10,0,127	0/0:5,0:5:2.22:0,2,7	0/0:39,0:39:43.37:0,43,689	0/0:35,0:35:54.68:0,55,690	1/1:12,0:12:5.51:92,6,0	0/0:10,0:10:2.99:0,3,23	0/1:2,14:16:18.52:19,0,19	1/1:17,0:16:5.68:28,6,0	1/1:19,0:19:14.20:71,14,0	1/1:23,0:23:8.52:43,9,0	0/1:8,0:7:2.67:18,0,3	1/1:26,0:26:34.21:296,34,0	0/1:19,0:19:11.45:17,0,11	1/1:2,0:2:5.98:46,6,0
chr10	74988062	.	GCA	G	399.14	PASS	AB=0.948;AC=22;AF=0.500;AN=44;BaseQRankSum=6.179;DP=463;FS=36.383;HRun=0;HaplotypeScore=113.9878;InbreedingCoeff=0.1695;MQ=52.50;MQ0=8;MQRankSum=-4.315;QD=1.69;ReadPosRankSum=4.226;VQSLOD=0.2308;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:8,0:8:25.76:26,0,38	./.	./.	0/1:13,1:13:19.94:20,0,120	0/1:17,1:27:13.49:13,0,126	0/1:26,0:25:37.82:38,0,134	./.	1/1:13,0:13:8.52:42,9,0	1/1:9,0:9:2.84:14,3,0	0/0:11,0:12:2.96:0,3,19	1/1:20,0:20:5.47:28,5,0	1/1:19,0:19:19.89:98,20,0	0/1:17,0:16:6.79:7,0,263	0/1:11,4:15:55.02:78,0,55	./.	0/0:31,10:41:6.73:0,7,379	0/0:31,1:35:1.43:0,1,342	0/0:13,0:13:0.46:0,0,2	0/0:11,0:11:6.02:0,6,85	0/0:18,0:18:5.69:0,6,54	1/1:17,0:16:5.68:28,6,0	1/1:19,0:19:14.20:70,14,0	1/1:23,0:23:8.52:42,9,0	1/1:5,0:7:8.52:41,9,0	0/0:28,0:27:2.65:0,3,12	0/0:19,0:19:8.57:0,9,70	./.
chr10	74988681	.	CT	C	612.17	PASS	AB=0.742;AC=14;AF=0.250;AN=56;BaseQRankSum=0.933;DP=358;FS=6.546;HRun=12;HaplotypeScore=42.4379;InbreedingCoeff=0.7180;MQ=59.72;MQ0=4;MQRankSum=0.301;QD=10.20;ReadPosRankSum=-0.357;VQSLOD=1.9764;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:17:32.38:239,32,0	0/0:10,1:11:6.82:0,7,251	0/0:10,0:5:6.44:0,6,51	0/0:5,0:3:0.68:0,1,26	0/0:17,0:17:24.50:0,25,405	0/0:14,0:15:37.11:0,37,341	0/0:7,0:6:14.99:0,15,142	0/0:30,1:26:41.88:0,42,390	1/1:0,4:4:11.95:93,12,0	0/0:20,0:20:45.07:0,45,444	0/0:16,0:17:41.90:0,42,399	1/1:1,6:7:17.93:139,18,0	1/1:2,6:8:14.94:116,15,0	0/0:6,0:6:15.03:0,15,152	0/0:12,0:12:34.88:0,35,339	0/1:7,2:9:5.20:5,0,134	0/0:20,0:19:48.07:0,48,473	0/0:15,0:15:33.07:0,33,335	0/0:23,0:22:54.18:0,54,286	0/0:20,0:20:52.39:0,52,293	0/0:9,0:8:20.45:0,20,118	1/1:3,2:3:5.97:46,6,0	1/1:2,4:6:14.94:116,15,0	0/1:2,2:4:20.34:37,0,20	0/0:17,0:17:36.04:0,36,347	0/0:21,0:21:50.86:0,51,251	0/0:15,0:15:43.82:0,44,260	0/0:6,0:6:17.48:0,17,98
chr10	74989957	.	A	ATC	1436.50	PASS	AB=1.000;AC=25;AF=0.521;AN=48;BaseQRankSum=3.794;DP=257;FS=14.053;HRun=0;HaplotypeScore=92.8904;InbreedingCoeff=0.7896;MQ=66.17;MQ0=18;MQRankSum=-0.005;QD=22.10;ReadPosRankSum=1.119;VQSLOD=3.6310;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:4:8.54:0,9,51	0/0:21,0:6:18.06:0,18,244	0/0:25,0:13:11.49:0,11,142	0/0:16,0:15:28.16:0,28,246	0/0:13,0:13:35.91:0,36,371	0/0:8,0:8:17.70:0,18,182	0/0:34,0:31:61.10:0,61,585	1/1:2,0:2:5.93:40,6,0	1/1:2,0:1:3:26,3,0	./.	1/1:3,0:2:6.02:72,6,0	./.	0/0:22,0:22:48.22:0,48,516	0/0:16,0:15:35.65:0,36,388	1/1:1,0:1:3.01:36,3,0	0/0:19,0:19:48.62:0,49,488	0/0:12,0:11:20.57:0,21,223	1/1:10,3:10:20.58:237,21,0	1/1:14,0:14:37.05:431,37,0	1/1:6,0:5:8.72:107,9,0	1/1:2,0:2:6:62,6,0	./.	1/1:2,0:2:5.98:53,6,0	0/1:1,0:1:0:0,0,0	1/1:7,0:7:18.02:216,18,0	1/1:10,0:10:24.63:301,25,0	1/1:1,0:1:3.01:37,3,0
chr10	74991237	.	TACACACACACACACACACAC	T	17870.18	PASS	AB=0.700;AC=30;AF=0.556;AN=54;BaseQRankSum=12.022;DP=500;FS=25.163;HRun=0;HaplotypeScore=297.6600;InbreedingCoeff=0.7562;MQ=48.19;MQ0=9;MQRankSum=-9.268;QD=59.17;ReadPosRankSum=6.035;VQSLOD=2.8301;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,8:21:99:473,0,186	0/0:4,0:5:15.05:0,15,1341	0/0:18,0:8:6:0,6,66	0/0:18,0:7:9.03:0,9,270	0/0:23,0:27:55.02:0,55,3637	0/0:16,0:16:15.88:0,16,1317	0/0:9,0:9:9.23:0,9,1118	0/0:30,0:27:25.89:0,26,1373	0/1:6,6:12:12.87:469,0,13	1/1:2,20:21:54.12:2362,54,0	1/1:7,16:23:36.08:1682,36,0	1/1:5,13:18:29.96:1598,30,0	1/1:5,14:19:30.10:1604,30,0	0/0:15,0:15:36.12:0,36,2891	0/0:16,0:19:36.12:0,36,2944	1/1:5,13:17:15.05:802,15,0	0/0:23,0:22:45.13:0,45,3566	0/0:13,0:13:24.08:0,24,1481	1/1:7,0:9:3.01:140,3,0	1/1:8,0:29:39.13:1816,39,0	./.	1/1:8,9:17:15.05:802,15,0	1/1:8,14:22:21.96:1116,22,0	1/1:3,1:4:3.01:160,3,0	1/1:6,11:17:15.05:794,15,0	1/1:5,0:27:42.14:1956,42,0	1/1:8,0:33:33.11:1537,33,0	1/1:1,0:10:12.04:559,12,0
chr10	74991641	.	T	TA	4846.60	PASS	AB=0.610;AC=33;AF=0.589;AN=56;BaseQRankSum=1.485;DP=509;FS=4.615;HRun=11;HaplotypeScore=65.4392;InbreedingCoeff=0.8842;MQ=70.39;MQ0=0;MQRankSum=0.004;QD=16.49;ReadPosRankSum=2.937;VQSLOD=5.8684;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,1:17:31.41:173,31,0	0/0:13,0:14:37.90:0,38,284	0/0:13,0:13:11.85:0,12,88	0/0:2,0:2:2.99:0,3,23	0/0:29,0:31:69.27:0,69,504	0/0:19,0:21:52.80:0,53,395	0/0:19,0:21:48.86:0,49,353	0/0:44,0:45:93.76:0,94,712	1/1:3,1:16:28.57:159,29,0	1/1:6,8:14:21.04:213,21,0	1/1:4,27:31:78.06:764,78,0	1/1:2,0:19:37.06:191,37,0	1/1:1,1:20:40.08:225,40,0	0/0:20,0:20:44.78:0,45,344	0/0:23,0:23:59.72:0,60,458	1/1:0,13:13:33.07:335,33,0	0/0:21,0:21:54.24:0,54,415	0/0:3,0:3:5.97:0,6,46	1/1:6,2:8:9.01:87,9,0	1/1:7,22:29:39.81:564,40,0	1/1:4,11:15:30.06:304,30,0	1/1:2,0:11:25.68:133,26,0	1/1:4,0:19:36.93:185,37,0	1/1:2,0:5:5.68:29,6,0	1/1:2,20:22:54.11:548,54,0	1/1:7,16:23:24.86:434,25,0	0/1:9,16:25:1.52:351,0,2	1/1:2,5:7:15.03:152,15,0
chr10	74992609	.	TAG	T	4327.88	PASS	AB=0.548;AC=11;AF=0.196;AN=56;BaseQRankSum=14.691;DP=615;FS=4.800;HRun=0;HaplotypeScore=91.3055;InbreedingCoeff=0.8850;MQ=79.49;MQ0=0;MQRankSum=-0.305;QD=36.37;ReadPosRankSum=0.072;VQSLOD=6.9779;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.25:0,72,1319	0/0:13,0:13:39.12:0,39,685	0/0:22,0:22:54.17:0,54,942	0/0:8,0:8:21.07:0,21,384	0/0:41,0:41:99:0,114,2081	0/0:32,0:32:96.31:0,96,1724	0/0:25,0:25:72.23:0,72,1289	0/0:35,0:35:99:0,99,1683	0/0:23,0:23:66.23:0,66,1201	0/0:28,0:28:81.22:0,81,1418	0/0:16,0:16:45.15:0,45,824	0/0:22,0:22:66.23:0,66,1209	0/0:24,0:24:72.25:0,72,1311	0/0:15,0:15:45.15:0,45,816	0/0:27,0:27:78.24:0,78,1360	0/0:23,0:23:66.23:0,66,1210	0/0:17,0:17:51.17:0,51,934	0/0:14,0:14:42.14:0,42,769	1/1:2,13:15:42.13:585,42,0	1/1:1,20:21:63.17:873,63,0	1/1:0,15:15:33.11:472,33,0	0/0:19,0:19:57.20:0,57,1044	0/0:21,0:21:63.22:0,63,1135	0/0:16,0:16:48.16:0,48,879	0/0:31,0:31:90.31:0,90,1649	0/1:4,19:22:99:687,0,102	1/1:1,33:34:99:1416,99,0	1/1:1,10:11:21.07:295,21,0
chr10	74992900	.	TA	T	2196.05	PASS	AB=0.556;AC=11;AF=0.196;AN=56;BaseQRankSum=-0.828;DP=526;FS=0.000;HRun=11;HaplotypeScore=70.3563;InbreedingCoeff=0.8927;MQ=66.91;MQ0=1;MQRankSum=-1.772;QD=18.30;ReadPosRankSum=2.753;VQSLOD=4.6341;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:29:65.58:0,66,349	0/0:14,0:14:42.09:0,42,434	0/0:10,0:6:14.97:0,15,146	0/0:11,0:10:18.04:0,18,128	0/0:29,0:29:47.69:0,48,674	0/0:20,1:21:32.47:0,32,539	0/0:9,0:9:21.05:0,21,224	0/0:36,3:39:20.81:0,21,809	0/0:2,0:15:31.52:0,32,176	0/0:7,0:20:46.11:0,46,262	0/0:7,0:24:51.62:0,52,289	0/0:8,0:22:40.20:0,40,230	0/0:3,1:24:29.92:0,30,249	0/0:16,0:16:36.07:0,36,375	0/0:16,2:18:45.11:0,45,473	0/0:3,0:20:37.40:0,37,186	0/0:27,0:27:69.15:0,69,727	0/0:7,0:7:21.05:0,21,224	1/1:2,9:12:28.96:220,29,0	1/1:0,16:17:43.98:351,44,0	1/1:1,16:17:41.95:345,42,0	0/0:4,0:11:20.04:0,20,110	0/0:3,0:10:22.96:0,23,132	0/0:3,0:15:31.40:0,31,166	0/0:3,0:13:19.92:0,20,100	1/1:3,24:28:54.49:523,54,0	1/1:3,33:36:95.87:788,96,0	0/1:2,8:10:8.02:148,0,8
chr10	74993038	.	GGAAA	G	7519.20	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.870;DP=551;FS=4.375;HRun=0;HaplotypeScore=99.4580;InbreedingCoeff=0.9987;MQ=72.71;MQ0=0;MQRankSum=-2.898;QD=52.22;ReadPosRankSum=2.538;VQSLOD=6.1269;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.16:0,48,1294	0/0:13,0:13:39.13:0,39,1034	0/0:8,0:8:21.07:0,21,505	0/0:12,0:13:33.70:0,34,552	0/0:30,0:30:87.28:0,87,2302	0/0:24,0:24:69.24:0,69,1836	0/0:10,0:10:30.10:0,30,821	0/0:41,0:41:99:0,114,3043	0/0:11,0:11:33.11:0,33,815	0/0:22,0:22:63.21:0,63,1632	0/0:22,0:22:63.22:0,63,1710	0/0:22,0:22:60.21:0,60,1643	0/0:15,0:15:45.15:0,45,1211	0/0:17,0:17:48.16:0,48,1315	0/0:18,0:18:51.18:0,51,1331	0/0:22,0:22:66.23:0,66,1782	0/0:23,0:23:69.21:0,69,1710	0/0:12,0:12:36.12:0,36,986	1/1:1,13:14:39.11:689,39,0	1/1:1,31:32:90.22:1668,90,0	1/1:1,26:27:66.23:1279,66,0	0/0:10,0:10:30.10:0,30,792	0/0:17,0:17:51.16:0,51,1321	0/0:16,0:16:48.16:0,48,1270	0/0:24,0:24:72.25:0,72,1970	1/1:0,30:30:90.27:1674,90,0	1/1:2,29:31:84.29:1628,84,0	1/1:0,10:10:30.10:581,30,0
chr10	74995182	.	TC	T	625.13	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.175;DP=667;FS=11.596;HRun=4;HaplotypeScore=62.5188;InbreedingCoeff=0.9988;MQ=80.44;MQ0=0;MQRankSum=-4.881;QD=29.77;ReadPosRankSum=0.739;VQSLOD=3.1241;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:60.18:720,60,0	0/0:9,0:9:27.09:0,27,378	0/0:19,0:19:54.08:0,54,709	0/0:20,0:20:60.20:0,60,819	0/0:30,0:30:78.26:0,78,1088	0/0:34,0:34:93.30:0,93,1284	0/0:18,0:18:51.16:0,51,696	0/0:42,0:42:99:0,123,1688	0/0:14,0:14:42.14:0,42,587	0/0:28,0:28:84.28:0,84,1174	0/0:18,0:18:54.18:0,54,755	0/0:20,0:20:60.19:0,60,822	0/0:20,0:20:57.17:0,57,779	0/0:21,0:21:63.20:0,63,864	0/0:35,0:35:99:0,99,1370	0/0:23,0:23:63.21:0,63,881	0/0:45,0:44:99:0,129,1790	0/0:19,0:19:48.14:0,48,648	0/0:23,0:23:69.22:0,69,949	0/0:27,0:27:78.26:0,78,1091	0/0:14,0:14:36.12:0,36,504	0/0:24,0:24:69.22:0,69,945	0/0:27,0:27:81.24:0,81,1096	0/0:16,0:16:45.15:0,45,630	0/0:16,0:16:45.13:0,45,584	0/0:26,0:26:75.24:0,75,1030	0/0:33,0:33:99:0,99,1383	0/0:25,0:25:75.25:0,75,1047
chr10	74997178	.	GACAA	G	4619.24	PASS	AB=0.608;AC=11;AF=0.196;AN=56;BaseQRankSum=10.480;DP=741;FS=6.886;HRun=0;HaplotypeScore=125.4843;InbreedingCoeff=0.8927;MQ=70.19;MQ0=0;MQRankSum=-2.275;QD=31.21;ReadPosRankSum=2.902;VQSLOD=4.6310;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,114,2734	0/0:10,0:10:24.08:0,24,576	0/0:30,0:29:51.60:0,52,1044	0/0:22,0:22:48.16:0,48,1097	0/0:23,0:23:48.16:0,48,1170	0/0:23,0:23:63.22:0,63,1570	0/0:28,0:28:69.24:0,69,1678	0/0:43,0:43:78.25:0,78,1693	0/0:16,0:16:33.11:0,33,824	0/0:33,0:33:87.25:0,87,2017	0/0:15,0:15:33.01:0,33,715	0/0:34,0:34:84.29:0,84,2071	0/0:32,0:32:84.29:0,84,2017	0/0:26,0:26:60.19:0,60,1419	0/0:29,0:29:63.21:0,63,1498	0/0:42,0:42:90.29:0,90,2096	0/0:31,0:31:84.27:0,84,1977	0/0:18,0:18:51.17:0,51,1210	1/1:8,15:23:45.15:757,45,0	1/1:4,10:14:27.09:425,27,0	1/1:9,31:40:77.87:1309,78,0	0/0:19,0:19:42.14:0,42,978	0/0:17,0:17:33.10:0,33,749	0/0:29,0:29:78.24:0,78,1773	0/0:27,0:27:63.22:0,63,1460	0/1:11,20:31:11.74:939,0,12	1/1:9,19:28:51.17:865,51,0	1/1:3,9:12:21:323,21,0
chr10	74997704	.	A	ACTGTGTATAATGTG	17580.24	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=-10.046;DP=888;FS=7.027;HRun=0;HaplotypeScore=197.5221;InbreedingCoeff=0.7794;MQ=57.43;MQ0=0;MQRankSum=-7.525;QD=26.60;ReadPosRankSum=-2.171;VQSLOD=2.7033;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:25:6.91:235,7,0	0/0:22,0:22:57.20:0,57,1839	0/0:9,0:9:14.98:0,15,202	0/0:7,0:6:7.62:0,8,152	0/0:43,0:43:99:0,111,3538	0/0:27,0:27:66.17:0,66,2069	0/0:9,0:9:18.05:0,18,447	0/0:49,0:49:99:0,99,2578	1/1:4,26:31:15.05:935,15,0	1/1:10,24:40:69.24:2481,69,0	1/1:5,25:39:27.09:983,27,0	1/1:5,41:52:20.85:1435,21,0	1/1:2,35:50:12.04:727,12,0	0/0:31,0:31:78.27:0,78,2713	0/0:30,0:30:81.25:0,81,2433	1/1:5,33:46:9.03:466,9,0	0/1:41,0:41:49.34:49,0,2563	0/1:24,0:24:3.12:3,0,1595	1/1:3,9:15:42.13:1023,42,0	1/1:3,34:47:45.14:1400,45,0	1/1:16,0:16:24.05:356,24,0	1/1:3,20:26:15.05:742,15,0	1/1:2,28:35:15.05:795,15,0	1/1:5,11:19:3.01:87,3,0	1/1:2,29:38:12.04:821,12,0	1/1:8,28:40:78.27:3069,78,0	1/1:4,38:50:27.09:1600,27,0	1/1:0,23:26:6.02:373,6,0
chr10	74998405	.	CA	C	4617.40	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.382;DP=688;FS=6.556;HRun=2;HaplotypeScore=81.8969;InbreedingCoeff=0.9999;MQ=84.52;MQ0=0;MQRankSum=-6.246;QD=36.94;ReadPosRankSum=1.658;VQSLOD=5.4307;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.20:0,60,899	0/0:12,0:12:36.12:0,36,540	0/0:22,0:22:66.20:0,66,949	0/0:30,0:30:83.91:0,84,1085	0/0:41,0:41:99:0,114,1709	0/0:22,0:22:66.21:0,66,967	0/0:29,0:29:87.28:0,87,1283	0/0:36,0:36:99:0,108,1601	0/0:17,0:17:48.16:0,48,720	0/0:26,0:26:78.26:0,78,1169	0/0:19,0:19:54.18:0,54,809	0/0:33,0:33:96.32:0,96,1435	0/0:28,0:28:78.25:0,78,1148	0/0:27,0:27:78.26:0,78,1169	0/0:22,0:22:66.22:0,66,988	0/0:28,0:28:81.25:0,81,1176	0/0:29,0:29:87.29:0,87,1303	0/0:23,0:23:69.23:0,69,1034	1/1:0,17:17:51.17:661,51,0	1/1:1,16:17:48.16:622,48,0	1/1:0,24:24:63.20:818,63,0	0/0:23,0:23:69.23:0,69,1015	0/0:28,0:28:84.28:0,84,1258	0/0:18,0:18:54.17:0,54,791	0/0:30,0:30:90.30:0,90,1349	1/1:0,33:33:99:1270,99,0	1/1:0,23:23:63.20:818,63,0	1/1:0,11:11:33.11:428,33,0
chr10	74999396	.	G	GA	1636.15	PASS	AB=0.856;AC=17;AF=0.304;AN=56;BaseQRankSum=-6.734;DP=530;FS=5.254;HRun=11;HaplotypeScore=64.1426;InbreedingCoeff=0.4370;MQ=77.76;MQ0=3;MQRankSum=1.067;QD=7.54;ReadPosRankSum=2.021;VQSLOD=2.1657;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:21:37.01:361,37,0	0/0:7,0:7:20.92:0,21,162	0/1:33,0:22:17.77:18,0,185	0/1:31,0:21:13.33:13,0,48	0/0:25,0:26:61.76:0,62,468	0/0:33,0:33:86.63:0,87,670	0/0:10,0:10:26.88:0,27,207	0/0:39,1:40:41.12:0,41,498	1/1:1,13:13:27.05:274,27,0	0/0:21,0:21:47.78:0,48,371	0/0:14,0:15:34.89:0,35,261	1/1:3,15:18:36.07:365,36,0	1/1:1,15:17:38.91:380,39,0	0/0:16,0:16:35.85:0,36,279	0/0:14,1:15:11.41:0,11,271	0/1:22,2:26:5.11:5,0,317	0/1:10,2:13:31.94:32,0,139	0/0:19,0:20:43.85:0,44,329	0/1:15,1:17:28.53:29,0,161	0/0:16,0:17:41.64:0,42,322	0/0:15,1:15:38.83:0,39,302	1/1:0,9:9:15.03:152,15,0	0/1:2,7:10:9.18:132,0,9	0/1:3,2:6:11.38:63,0,11	0/0:19,1:21:19.41:0,19,324	0/0:21,1:23:25.36:0,25,368	0/0:18,0:20:40.85:0,41,308	0/0:13,0:13:38.85:0,39,302
chr10	75003919	.	ACAGTT	A	16121.07	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=15.504;DP=512;FS=4.225;HRun=0;HaplotypeScore=105.0422;InbreedingCoeff=0.9929;MQ=68.61;MQ0=0;MQRankSum=-3.610;QD=49.30;ReadPosRankSum=7.399;VQSLOD=4.5734;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:18.06:351,18,0	0/0:6,0:6:18.06:0,18,477	0/0:11,0:11:30.10:0,30,862	0/0:7,0:7:17.27:0,17,357	0/0:28,0:28:84.27:0,84,2463	0/0:25,0:25:72.23:0,72,2136	0/0:16,0:16:48.15:0,48,1364	0/0:34,0:34:93.31:0,93,2694	1/1:0,17:17:45.15:932,45,0	1/1:3,26:29:78.20:1533,78,0	1/1:1,16:17:42.14:870,42,0	1/1:2,15:17:45.15:933,45,0	1/1:1,22:23:45.15:933,45,0	0/0:14,0:14:36.12:0,36,1102	0/0:23,0:23:66.20:0,66,1871	1/1:0,18:18:51.18:1057,51,0	0/0:12,0:12:30.10:0,30,910	0/0:9,0:9:24.08:0,24,735	1/1:2,6:8:18.06:373,18,0	1/1:4,33:37:87.23:1721,87,0	1/1:2,7:9:18.06:373,18,0	1/1:2,18:20:45.07:857,45,0	1/1:0,20:20:51.18:1056,51,0	1/1:1,10:11:21.02:435,21,0	1/1:3,17:20:48.16:995,48,0	1/1:1,24:25:72.25:1470,72,0	1/1:5,27:32:75.26:1550,75,0	1/1:1,12:13:33.11:683,33,0
chr10	75003985	.	CAAAAA	C	3460.96	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=0.177;DP=526;FS=10.060;HRun=16;HaplotypeScore=139.5999;InbreedingCoeff=0.9808;MQ=65.60;MQ0=2;MQRankSum=-1.561;QD=33.93;ReadPosRankSum=7.845;VQSLOD=0.8815;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:34:0,34,545	0/0:5,0:5:15.04:0,15,316	0/0:20,0:14:20:0,20,247	0/0:13,0:9:12.04:0,12,215	0/0:33,0:39:99:0,108,2616	0/0:28,0:29:74.93:0,75,1789	0/0:9,0:11:21.07:0,21,461	0/0:29,0:31:81.26:0,81,1878	0/0:13,0:13:27.09:0,27,518	0/0:20,0:21:48.13:0,48,1069	0/0:30,0:30:81.27:0,81,1883	0/0:14,0:14:30.10:0,30,644	0/0:24,0:24:57.20:0,57,1189	0/0:12,0:16:39.13:0,39,912	0/0:16,0:17:42.14:0,42,986	0/0:19,0:19:54.19:0,54,1355	0/0:21,0:21:51.17:0,51,1062	0/0:16,0:17:39.13:0,39,918	1/1:3,4:9:17.46:225,17,0	1/1:7,20:27:63.08:981,63,0	1/1:2,5:7:15.02:234,15,0	0/0:18,0:18:45.15:0,45,850	0/0:21,0:21:54.18:0,54,994	0/0:8,0:8:21.03:0,21,357	0/0:18,0:20:54.19:0,54,1225	1/1:6,18:25:60.02:917,60,0	1/1:10,17:27:53.82:824,54,0	1/1:0,6:6:18.06:280,18,0
chr10	75004000	.	AAT	A	2085.09	PASS	AB=0.982;AC=17;AF=0.304;AN=56;BaseQRankSum=-1.396;DP=548;FS=3.402;HRun=0;HaplotypeScore=104.2114;InbreedingCoeff=0.3943;MQ=61.61;MQ0=2;MQRankSum=3.466;QD=8.69;ReadPosRankSum=-1.164;VQSLOD=3.3358;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,6:15:38.78:361,39,0	0/0:5,0:5:15.02:0,15,196	0/1:17,0:11:17.92:18,0,96	0/0:7,0:5:11.92:0,12,115	0/0:44,0:44:99:0,123,1525	0/0:27,0:27:66.47:0,66,922	0/0:10,0:10:24.40:0,24,289	0/0:37,0:37:99:0,102,1247	1/1:14,0:14:9.53:187,10,0	0/1:26,0:26:10.25:262,0,10	0/1:33,1:34:99:225,0,111	0/1:15,0:15:26.19:119,0,26	0/1:25,0:26:15.90:216,0,16	0/0:17,0:17:47.94:0,48,560	0/0:16,0:16:38.93:0,39,470	0/1:23,0:22:62.68:63,0,145	0/0:21,0:21:56.78:0,57,631	0/0:18,0:18:45.02:0,45,556	0/0:13,0:13:36.27:0,36,221	0/0:27,0:27:68.50:0,69,325	0/0:5,0:5:11.80:0,12,44	1/1:17,2:19:33.05:269,33,0	1/1:17,4:21:30.44:280,30,0	1/1:7,2:9:11.75:162,12,0	0/1:19,1:20:79.97:110,0,80	0/0:27,0:27:63.14:0,63,335	0/0:23,0:23:57.43:0,57,277	0/0:11,0:11:29.58:0,30,170
chr10	75004001	.	AT	A	3873.28	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-2.451;DP=526;FS=6.434;HRun=1;HaplotypeScore=84.8299;InbreedingCoeff=0.9359;MQ=60.46;MQ0=1;MQRankSum=3.121;QD=17.45;ReadPosRankSum=-1.058;VQSLOD=3.3228;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,1:15:41.64:316,42,0	0/0:5,0:5:15.02:0,15,154	0/1:15,0:9:4.12:4,0,54	0/0:7,0:5:11.54:0,12,95	0/0:44,0:44:99:0,108,1124	0/0:26,0:26:65.49:0,65,657	0/0:10,0:10:25.87:0,26,213	0/0:37,0:37:99:0,101,1009	1/1:10,3:13:35.90:327,36,0	1/1:25,1:26:55.06:423,55,0	1/1:27,3:30:56.12:416,56,0	1/1:11,2:13:29.96:271,30,0	1/1:18,5:24:61.02:545,61,0	0/0:17,0:17:40.04:0,40,403	0/0:14,0:14:38.06:0,38,363	1/1:21,0:20:24.42:177,24,0	0/0:21,0:21:59.55:0,60,507	0/0:16,0:16:44.94:0,45,432	0/0:14,0:14:41.23:0,41,281	0/0:27,0:27:77.72:0,78,451	0/0:5,0:5:14.17:0,14,73	1/1:9,9:18:48.48:538,48,0	1/1:13,7:20:48.25:428,48,0	1/1:8,1:9:24.25:188,24,0	1/1:17,1:18:32.27:241,32,0	0/0:27,0:27:75.25:0,75,466	0/0:23,0:23:65.97:0,66,381	0/0:11,0:11:32.11:0,32,204
chr10	75005311	.	CA	C	10190.36	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=12.049;DP=634;FS=20.199;HRun=7;HaplotypeScore=66.6905;InbreedingCoeff=0.9944;MQ=76.46;MQ0=1;MQRankSum=-1.815;QD=26.33;ReadPosRankSum=5.178;VQSLOD=3.2607;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,29:32:69.15:704,69,0	0/0:8,0:8:21.07:0,21,264	0/0:28,0:24:51.11:0,51,590	0/0:34,0:31:22.91:0,23,508	0/0:22,0:22:60.18:0,60,743	0/0:34,0:34:99:0,99,1230	0/0:16,0:16:45.14:0,45,566	0/0:18,0:18:48.14:0,48,592	1/1:0,11:11:30.07:306,30,0	1/1:2,17:19:51.12:520,51,0	1/1:2,18:20:51.12:519,51,0	1/1:0,21:21:54.12:551,54,0	1/1:2,22:24:63.14:643,63,0	0/0:23,0:23:69.22:0,69,866	0/0:28,0:28:78.25:0,78,981	1/1:1,22:23:63.14:643,63,0	0/0:24,0:24:66.21:0,66,830	0/0:11,0:11:27.04:0,27,322	1/1:2,14:16:42.10:429,42,0	1/1:1,25:26:75.17:764,75,0	1/1:2,29:31:69.16:704,69,0	1/1:0,23:23:66.15:673,66,0	1/1:1,24:25:72.16:734,72,0	1/1:2,29:31:81.18:826,81,0	1/1:1,14:15:39.09:398,39,0	1/1:1,25:26:75.17:765,75,0	1/1:5,31:36:87.19:888,87,0	1/1:0,8:8:12.03:122,12,0
chr10	75005864	.	CCT	C	17142	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=17.466;DP=783;FS=22.030;HRun=0;HaplotypeScore=100.0747;InbreedingCoeff=0.9977;MQ=87.60;MQ0=5;MQRankSum=-4.409;QD=35.79;ReadPosRankSum=4.784;VQSLOD=4.7003;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:72.24:990,72,0	0/0:7,0:7:21.06:0,21,344	0/0:26,0:26:63.21:0,63,1046	0/0:29,0:29:62.59:0,63,1205	0/0:22,0:22:66.23:0,66,1170	0/0:41,0:41:99:0,117,2020	0/0:21,0:21:60.19:0,60,1035	0/0:37,0:37:84.27:0,84,1409	1/1:1,28:29:78.26:1072,78,0	1/1:3,37:40:99:1484,108,0	1/1:1,22:23:57.19:783,57,0	1/1:1,33:34:96.32:1319,96,0	1/1:2,31:33:84.28:1154,84,0	0/0:32,1:33:43.06:0,43,1396	0/0:43,0:43:99:0,123,2172	1/1:4,45:49:99:1690,123,0	0/0:29,0:29:87.30:0,87,1543	0/0:16,0:16:45.63:0,46,799	1/1:3,16:19:38.19:606,38,0	1/1:0,23:21:63.21:866,63,0	1/1:2,27:29:78.26:1072,78,0	1/1:1,9:10:21.07:289,21,0	1/1:2,19:21:51.17:701,51,0	1/1:4,25:28:69.23:948,69,0	1/1:1,19:20:51.17:701,51,0	1/1:0,36:34:99:1345,102,0	1/1:2,46:48:99:1874,138,0	1/1:0,6:6:18.06:247,18,0
chr10	75007081	.	C	CCTCAGTGA	14740.64	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-7.595;DP=742;FS=3.310;HRun=0;HaplotypeScore=192.2275;InbreedingCoeff=0.9790;MQ=84.86;MQ0=0;MQRankSum=-16.164;QD=71.56;ReadPosRankSum=1.603;VQSLOD=4.5933;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,36:43:63.01:2651,63,0	0/0:7,0:7:21.07:0,21,567	0/0:34,0:34:75.17:0,75,1627	0/0:29,0:27:43.70:0,44,919	0/0:25,0:25:66.17:0,66,1465	0/0:27,0:27:66.22:0,66,1713	0/0:25,0:25:66.21:0,66,1680	0/0:31,0:31:84.24:0,84,1828	1/1:6,18:25:54.19:2296,54,0	0/0:30,0:30:78.22:0,78,1939	0/0:15,0:15:39.12:0,39,942	1/1:6,29:36:69.24:2827,69,0	1/1:4,19:23:51.18:2146,51,0	0/0:31,0:31:90.29:0,90,2215	0/0:32,0:32:81.22:0,81,2029	0/0:27,0:27:72.24:0,72,1889	0/0:27,0:27:72.24:0,72,1848	0/0:18,0:18:45.61:0,46,1159	0/0:27,0:27:69.24:0,69,1835	0/0:20,0:20:54.17:0,54,1343	0/0:41,0:41:99:0,108,2707	1/1:4,28:33:66.23:2779,66,0	1/1:7,18:28:42:1797,42,0	1/1:6,12:18:5.94:244,6,0	0/0:24,0:24:63.20:0,63,1537	0/0:25,0:25:69.22:0,69,1718	0/0:34,0:34:93.28:0,93,2234	0/0:7,0:7:21.07:0,21,567
chr10	75009912	.	GTGTA	G	1406.65	PASS	AB=0.990;AC=19;AF=0.365;AN=52;BaseQRankSum=6.703;DP=664;FS=20.800;HRun=0;HaplotypeScore=178.0234;InbreedingCoeff=0.5683;MQ=57.39;MQ0=9;MQRankSum=-4.063;QD=6.12;ReadPosRankSum=0.949;VQSLOD=1.5810;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:0:0,0,0	0/0:11,0:11:15.05:0,15,348	./.	./.	0/1:19,1:20:0.81:1,0,892	0/0:10,0:18:6.02:0,6,105	0/0:18,0:18:18.04:0,18,330	0/0:28,0:25:7.14:0,7,40	1/1:19,0:19:26.90:238,27,0	0/0:33,0:32:48.16:0,48,836	0/0:19,0:19:21.07:0,21,391	1/1:21,0:21:30.03:280,30,0	1/1:23,0:23:27.03:252,27,0	0/0:32,1:34:1.32:0,1,1253	1/1:12,27:40:30.57:460,31,0	0/0:32,0:32:60.19:0,60,1074	0/0:27,0:27:39.13:0,39,876	0/0:13,0:12:18.05:0,18,356	0/1:13,0:12:15.35:15,0,149	0/1:24,0:24:20.61:21,0,464	0/0:41,0:41:70.24:0,70,1400	1/1:16,0:16:17.89:155,18,0	1/1:10,0:10:12.01:110,12,0	1/1:17,0:17:3.47:29,3,0	0/0:33,0:33:63.19:0,63,1112	0/0:30,0:30:16.37:0,16,772	0/0:36,0:36:9.22:0,9,1057	0/1:15,0:15:24.82:25,0,303
chr10	75009920	.	ATG	A	393.35	PASS	AB=0.673;AC=7;AF=0.125;AN=56;BaseQRankSum=10.999;DP=669;FS=22.647;HRun=0;HaplotypeScore=162.2762;InbreedingCoeff=0.2363;MQ=55.68;MQ0=13;MQRankSum=-6.163;QD=3.51;ReadPosRankSum=3.125;VQSLOD=1.2493;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,3:12:2.03:0,2,6	0/0:11,0:11:33.11:0,33,547	0/0:20,0:15:36.08:0,36,474	0/0:27,0:18:50.87:0,51,631	0/0:21,0:21:58.46:0,58,1063	0/0:18,0:18:33.11:0,33,466	0/0:20,0:20:57.19:0,57,912	0/0:28,0:22:63.20:0,63,885	0/1:8,13:20:70.74:107,0,71	0/0:34,0:32:68.78:0,69,642	0/0:18,0:18:47.84:0,48,408	1/1:8,15:23:7.53:162,8,0	0/1:11,11:22:99:117,0,103	0/0:36,0:36:87.26:0,87,1635	0/0:40,0:40:18.71:0,19,460	0/0:34,0:34:86.83:0,87,760	0/0:22,0:22:44.89:0,45,807	0/0:13,0:12:29.99:0,30,470	0/0:16,0:14:38.70:0,39,497	0/0:25,0:25:68.55:0,69,1001	0/0:45,0:45:99:0,111,1910	0/1:7,11:18:26.24:74,0,26	0/1:4,7:11:4.26:54,0,4	0/1:14,3:17:4.40:4,0,54	0/0:36,0:36:47.79:0,48,741	0/0:29,0:29:87.16:0,87,1428	0/0:35,0:35:98.87:0,99,1706	0/0:15,0:15:36.20:0,36,630
chr10	75009924	.	ATGTATG	A	1621.19	PASS	AB=0.681;AC=7;AF=0.125;AN=56;BaseQRankSum=10.404;DP=675;FS=22.183;HRun=0;HaplotypeScore=203.1404;InbreedingCoeff=0.2481;MQ=54.33;MQ0=16;MQRankSum=-6.956;QD=13.98;ReadPosRankSum=4.507;VQSLOD=1.2938;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,3:14:6.18:0,6,43	0/0:12,0:12:36.12:0,36,864	0/0:18,0:10:27.09:0,27,379	0/0:23,0:15:35.85:0,36,440	0/0:22,0:22:62.94:0,63,1823	0/0:22,0:22:42.14:0,42,743	0/0:22,0:22:63.18:0,63,1306	0/0:27,0:21:57.12:0,57,843	0/1:10,13:22:95.11:364,0,95	0/0:33,0:31:89.70:0,90,2161	0/0:17,0:17:47.95:0,48,1029	0/1:9,15:24:3.54:430,0,4	0/1:11,11:22:99:369,0,160	0/0:36,0:36:67.64:0,68,2746	0/0:41,0:41:59.10:0,59,641	0/0:34,0:34:87.15:0,87,2491	0/0:21,0:21:44.94:0,45,1473	0/0:13,0:12:33.11:0,33,852	0/0:14,0:12:36.11:0,36,710	0/0:26,0:26:72.16:0,72,1613	0/0:46,0:46:99:0,120,3458	1/1:7,11:18:23.10:328,23,0	0/1:5,7:12:21.24:205,0,21	0/1:14,3:17:39.73:61,0,40	0/0:37,0:37:99:0,102,2725	0/0:29,0:29:87.29:0,87,2280	0/0:35,0:35:99:0,102,2861	0/0:15,0:15:41.88:0,42,1002
chr10	75010554	.	TC	T	4287.90	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=6.124;DP=462;FS=2.383;HRun=4;HaplotypeScore=79.2152;InbreedingCoeff=0.9777;MQ=54.27;MQ0=8;MQRankSum=-4.080;QD=28.97;ReadPosRankSum=-0.847;VQSLOD=4.3874;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:36.11:431,36,0	0/0:9,0:9:27.09:0,27,378	0/0:22,0:5:15.05:0,15,195	0/0:23,1:6:5.99:0,6,73	0/0:24,0:24:66.21:0,66,903	0/0:18,0:18:54.18:0,54,756	0/0:23,0:23:54.15:0,54,722	0/0:20,0:20:60.17:0,60,820	1/1:1,6:7:18.05:214,18,0	1/1:0,7:7:21.06:252,21,0	1/1:1,18:19:36.10:423,36,0	1/1:0,19:19:48.15:573,48,0	1/1:1,12:13:36.11:431,36,0	0/0:15,0:15:42.14:0,42,584	0/0:14,0:14:36.11:0,36,486	1/1:0,9:9:27.08:323,27,0	0/0:34,0:34:78.15:0,78,1282	0/0:18,0:18:51.17:0,51,712	0/0:14,0:13:39.13:0,39,530	0/0:20,0:20:42.14:0,42,582	0/0:7,0:7:15.05:0,15,209	1/1:0,10:10:27.04:308,27,0	1/1:2,18:20:44.91:502,45,0	1/1:0,12:12:29.85:343,30,0	1/1:0,16:16:42.09:488,42,0	0/0:18,0:18:54.17:0,54,739	0/0:21,0:21:27.06:0,27,340	0/0:13,0:13:24.08:0,24,335
chr10	75010564	.	CGAAAAAAAGAAAAAAGAA	C	4832.84	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.224;DP=429;FS=2.041;HRun=0;HaplotypeScore=197.7318;InbreedingCoeff=0.9556;MQ=54.51;MQ0=11;MQRankSum=-3.010;QD=61.18;ReadPosRankSum=2.242;VQSLOD=4.3923;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:45.15:0,45,2802	0/0:9,0:9:24.07:0,24,1731	0/0:24,0:6:12.04:0,12,338	0/0:25,0:6:11.63:0,12,205	0/0:24,0:24:60.16:0,60,3381	0/0:18,0:18:45.14:0,45,3042	0/0:17,0:17:48.16:0,48,3016	0/0:22,0:22:60.17:0,60,3148	0/0:7,0:7:21.06:0,21,1134	0/0:7,0:7:18.02:0,18,876	0/0:15,0:15:30.06:0,30,1659	0/0:18,0:18:48.15:0,48,2554	0/0:12,0:12:33.11:0,33,2024	0/0:14,0:14:39.11:0,39,1824	0/0:9,0:9:24.08:0,24,1756	0/0:10,0:10:24.08:0,24,1439	0/0:32,0:33:93.25:0,93,4889	0/0:22,0:22:57.18:0,57,3974	1/1:3,10:12:27.05:773,27,0	1/1:2,14:16:27.09:1261,27,0	1/1:6,0:6:6.02:117,6,0	0/0:8,0:8:21.07:0,21,1137	0/0:15,0:15:36.10:0,36,2128	0/0:11,0:11:21:0,21,1097	0/0:12,0:12:33.10:0,33,1542	1/1:1,13:14:33.07:901,33,0	1/1:0,17:17:14.72:754,15,0	1/1:2,11:13:24.08:1027,24,0
chr10	75010587	.	G	GAA	2955.10	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=4.123;DP=483;FS=4.076;HRun=13;HaplotypeScore=107.6028;InbreedingCoeff=0.8656;MQ=57.18;MQ0=5;MQRankSum=-4.325;QD=15.80;ReadPosRankSum=-2.068;VQSLOD=2.4523;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,6:21:24.06:295,24,0	0/0:7,0:8:5.81:0,6,97	1/1:11,0:3:1.82:5,2,0	0/0:22,0:12:17.93:0,18,109	0/0:26,0:26:16.81:0,17,431	0/0:16,0:16:32.93:0,33,285	0/0:18,0:22:18.22:0,18,293	0/0:29,0:31:44.42:0,44,469	1/1:1,9:10:21.02:263,21,0	1/1:5,2:7:11.98:117,12,0	1/1:15,7:22:35.32:361,35,0	1/1:18,3:20:34.59:400,35,0	1/1:17,7:24:46.53:495,47,0	0/0:12,0:12:17.88:0,18,161	0/0:7,0:8:8.83:0,9,123	1/1:1,9:10:18.06:244,18,0	0/0:32,0:33:65.08:0,65,528	0/0:23,0:25:38.69:0,39,380	0/0:20,0:20:34.31:0,34,238	0/0:21,0:21:34.29:0,34,259	0/1:11,0:12:10.83:11,0,78	1/1:7,2:10:19.99:195,20,0	1/1:9,8:18:38.59:397,39,0	1/1:5,2:10:17.02:168,17,0	1/1:4,4:9:18.05:220,18,0	0/0:16,0:16:23.83:0,24,192	0/0:20,0:20:11.85:0,12,102	0/0:15,0:15:21.27:0,21,171
chr10	75011753	.	GA	G	1977.04	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.658;DP=640;FS=0.000;HRun=12;HaplotypeScore=74.1029;InbreedingCoeff=0.9754;MQ=69.16;MQ0=0;MQRankSum=-2.282;QD=14.43;ReadPosRankSum=0.644;VQSLOD=4.2351;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:60.11:0,60,604	0/0:10,0:10:27.05:0,27,274	0/0:9,0:9:8.75:0,9,74	0/0:12,0:10:14.36:0,14,112	0/0:18,0:19:45.39:0,45,435	0/0:26,0:26:60.12:0,60,609	0/0:22,2:27:19.16:0,19,514	0/0:17,0:17:45.07:0,45,446	0/0:17,0:17:30.05:0,30,300	0/0:26,1:26:33.87:0,34,525	0/0:11,0:11:27.05:0,27,274	0/0:35,0:35:87.14:0,87,861	0/0:28,0:31:77.91:0,78,753	0/0:35,0:35:87.12:0,87,852	0/0:25,1:26:32.09:0,32,482	0/0:28,1:29:63.92:0,64,823	0/0:25,0:24:69.10:0,69,682	0/0:17,0:17:39.06:0,39,389	1/1:8,16:24:50.67:387,51,0	1/1:8,10:18:29.85:232,30,0	1/1:6,28:34:50.19:573,50,0	0/0:24,1:26:43.96:0,44,598	0/0:17,0:18:33.79:0,34,321	0/0:32,0:33:84:0,84,836	0/0:27,0:28:63.11:0,63,626	1/1:8,20:29:31.33:417,31,0	1/1:2,22:24:59.73:461,60,0	1/1:1,7:8:11.95:93,12,0
chr10	75014706	.	T	TA	19295.91	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-17.018;DP=742;FS=3.194;HRun=1;HaplotypeScore=64.7259;InbreedingCoeff=0.9977;MQ=87.16;MQ0=0;MQRankSum=-3.929;QD=41.86;ReadPosRankSum=3.453;VQSLOD=5.3517;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:99:1664,111,0	0/0:13,0:13:39.13:0,39,506	0/0:28,0:28:80.92:0,81,1010	0/0:22,0:22:60.17:0,60,753	0/0:38,0:38:99:0,111,1412	0/0:31,0:31:93.29:0,93,1193	0/0:16,0:16:42.12:0,42,531	0/0:49,0:49:99:0,138,1752	1/1:1,23:24:63.21:943,63,0	1/1:0,27:27:81.26:1193,81,0	1/1:1,25:26:72.24:1068,72,0	1/1:0,21:21:60.20:899,60,0	1/1:0,40:40:99:1752,117,0	0/0:24,0:24:69.22:0,69,895	0/0:31,0:31:90.27:0,90,1149	1/1:1,22:23:66.22:989,66,0	0/0:16,0:16:48.16:0,48,623	0/0:13,0:13:36.12:0,36,467	1/1:2,30:32:90.22:1271,90,0	1/1:2,27:29:78.19:1096,78,0	1/1:0,25:25:69.23:1034,69,0	1/1:0,20:20:54.18:809,54,0	1/1:0,24:24:72.24:1079,72,0	1/1:1,20:21:57.19:854,57,0	1/1:0,36:36:99:1484,99,0	1/1:0,19:19:57.17:833,57,0	1/1:1,49:50:99:2102,141,0	1/1:0,5:5:15.05:225,15,0
chr10	75016363	.	AT	A	6223.23	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=12.672;DP=535;FS=1.480;HRun=5;HaplotypeScore=52.4329;InbreedingCoeff=0.9972;MQ=76.63;MQ0=0;MQRankSum=-2.319;QD=30.66;ReadPosRankSum=1.980;VQSLOD=5.3678;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:51.13:567,51,0	0/0:8,0:8:21.07:0,21,287	0/0:17,0:17:47.88:0,48,609	0/0:7,0:7:20.86:0,21,259	0/0:32,0:32:90.29:0,90,1215	0/0:14,0:14:39.13:0,39,533	0/0:12,0:12:36.12:0,36,492	0/0:38,0:38:99:0,111,1519	1/1:0,20:20:54.15:613,54,0	1/1:1,27:28:81.19:892,81,0	1/1:1,19:20:54.15:612,54,0	1/1:0,18:18:48.14:545,48,0	1/1:0,23:23:63.18:714,63,0	0/0:20,0:20:51.16:0,51,681	0/0:27,0:27:75.21:0,75,979	1/1:0,13:13:36.10:408,36,0	0/0:15,0:15:45.15:0,45,605	0/0:16,0:16:42.13:0,42,538	0/0:22,0:22:63.20:0,63,848	0/0:26,0:26:75.25:0,75,1026	0/0:8,0:8:24.08:0,24,328	1/1:2,11:13:30.09:340,30,0	1/1:0,23:23:63.18:715,63,0	1/1:0,9:9:21.06:238,21,0	1/1:0,19:19:51.15:579,51,0	0/0:25,0:25:72.24:0,72,985	0/0:35,0:35:99:0,105,1403	0/0:10,0:10:21.06:0,21,274
chr10	75016755	.	TA	T	2701.25	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.237;DP=575;FS=2.720;HRun=2;HaplotypeScore=52.3119;InbreedingCoeff=0.9988;MQ=75.35;MQ0=0;MQRankSum=0.303;QD=33.77;ReadPosRankSum=3.799;VQSLOD=3.7588;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.16:0,48,717	0/0:10,0:10:30.10:0,30,450	0/0:13,0:13:34.62:0,35,436	0/0:8,0:8:23.94:0,24,316	0/0:33,0:33:99:0,99,1443	0/0:22,0:22:66.21:0,66,969	0/0:18,0:18:54.17:0,54,787	0/0:45,0:45:99:0,135,1986	0/0:21,0:21:54.17:0,54,789	1/1:0,15:15:42.14:545,42,0	1/1:0,24:24:66.17:837,66,0	0/0:21,0:21:57.18:0,57,831	0/0:20,0:20:60.20:0,60,899	0/0:16,0:16:45.14:0,45,653	0/0:27,0:27:78.26:0,78,1168	1/1:0,23:23:63.20:818,63,0	0/0:20,0:19:56.96:0,57,722	0/0:26,0:26:78.22:0,78,1140	0/0:14,0:14:42.14:0,42,629	0/0:32,0:32:96.31:0,96,1418	0/0:12,0:12:33.09:0,33,472	0/0:18,0:18:54.18:0,54,809	0/0:21,0:21:63.18:0,63,888	0/0:13,0:13:39.12:0,39,565	1/1:1,17:18:51.17:662,51,0	0/0:17,0:17:51.16:0,51,729	0/0:42,0:42:99:0,126,1862	0/0:9,0:9:27.09:0,27,405
chr10	75018070	.	G	GAACCTTA	23111.79	PASS	AB=0.656;AC=24;AF=0.429;AN=56;BaseQRankSum=9.318;DP=605;FS=27.089;HRun=0;HaplotypeScore=248.3476;InbreedingCoeff=0.2762;MQ=54.55;MQ0=10;MQRankSum=-14.904;QD=64.92;ReadPosRankSum=4.303;VQSLOD=3.2721;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,7:18:34.90:502,0,35	0/0:14,0:14:42.10:0,42,1049	0/0:37,0:20:51.17:0,51,1159	0/0:33,0:14:26.01:0,26,469	0/0:25,0:25:69.24:0,69,1819	0/0:28,0:28:78.27:0,78,2028	0/0:27,0:26:69.18:0,69,1680	0/0:14,0:14:36.11:0,36,870	0/1:7,12:19:99:921,0,101	1/1:16,13:30:21.59:1963,22,0	1/1:10,13:23:42.14:1507,42,0	0/1:13,11:22:88.48:1164,0,88	0/1:20,9:28:23.54:1546,0,24	0/0:22,0:22:63:0,63,1586	0/0:19,0:19:54.12:0,54,1310	1/1:14,10:23:50.30:1538,50,0	0/0:20,0:20:54.18:0,54,1324	0/0:10,0:10:28.91:0,29,715	1/1:14,7:21:3.38:1299,3,0	1/1:7,13:20:45.15:1596,45,0	0/1:4,3:5:14.87:231,0,15	0/1:6,10:17:14.73:1264,0,15	0/1:11,13:22:58.77:1364,0,59	0/1:3,3:6:27.70:294,0,28	1/1:14,16:30:67.91:2629,68,0	1/1:7,14:22:63.19:2119,63,0	0/1:8,19:27:13.89:2154,0,14	0/1:5,7:12:4.06:1021,0,4
chr10	75018072	.	A	ACCTT	9028.46	PASS	AB=0.992;AC=23;AF=0.411;AN=56;BaseQRankSum=12.545;DP=558;FS=15.961;HRun=0;HaplotypeScore=254.4722;InbreedingCoeff=0.2055;MQ=55.01;MQ0=13;MQRankSum=-13.749;QD=29.22;ReadPosRankSum=7.988;VQSLOD=2.9444;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:85.56:163,0,86	0/0:14,0:14:42.10:0,42,838	0/0:36,0:19:51.08:0,51,891	0/0:32,0:13:14.49:0,14,359	0/0:25,0:25:72.23:0,72,1472	0/0:28,0:27:81.23:0,81,1648	0/0:30,0:29:73.06:0,73,1394	0/0:14,0:14:39.12:0,39,741	0/1:20,0:18:99:429,0,141	0/1:27,0:27:33.57:804,0,34	1/1:17,1:18:30.10:560,30,0	0/1:23,0:21:99:465,0,187	0/1:27,0:26:99:532,0,211	0/0:22,0:22:66.23:0,66,1364	0/0:18,0:18:54.12:0,54,1051	0/1:20,1:21:50.62:538,0,51	0/0:20,0:20:54.19:0,54,1099	0/0:10,0:10:27.09:0,27,566	0/1:18,0:18:99:380,0,127	1/1:15,0:15:33.47:569,33,0	0/1:7,0:4:0.16:109,0,0	0/1:15,0:15:51.58:569,0,52	0/1:20,0:18:64.31:527,0,64	0/1:5,0:5:39.53:60,0,40	1/1:21,5:25:59.14:1262,59,0	1/1:17,0:17:34.80:773,35,0	1/1:25,0:25:5.31:831,5,0	1/1:12,0:12:15.01:459,15,0
chr10	75018084	.	AAG	A	747.83	PASS	AB=0.974;AC=24;AF=0.500;AN=48;BaseQRankSum=3.113;DP=543;FS=1.668;HRun=0;HaplotypeScore=225.5404;InbreedingCoeff=0.1397;MQ=47.85;MQ0=23;MQRankSum=-3.669;QD=2.35;ReadPosRankSum=-1.502;VQSLOD=2.6391;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:10:0.47:1,0,0	0/1:14,0:14:25.70:26,0,33	./.	./.	0/0:24,0:23:14.63:0,15,172	0/1:30,0:29:13.54:14,0,120	0/1:27,2:28:11.18:11,0,210	0/0:20,0:19:0:0,0,0	0/0:19,0:17:5.93:0,6,40	0/1:27,0:26:5.41:85,0,5	1/1:16,0:16:3:26,3,0	0/1:23,0:21:9.19:21,0,9	0/1:33,0:32:16.86:17,0,95	0/0:20,0:20:20.87:0,21,239	0/0:20,0:20:9.03:0,9,125	1/1:24,0:22:22.74:182,23,0	0/1:14,3:17:40.51:41,0,199	0/0:10,0:9:11.25:0,11,137	1/1:16,0:16:4.11:88,4,0	0/0:12,0:12:5.53:0,6,24	./.	./.	0/0:22,0:18:6.38:0,6,40	1/1:4,0:4:2.90:16,3,0	1/1:26,0:24:21.13:162,21,0	1/1:13,0:13:2.74:59,3,0	0/1:22,0:22:12.10:12,0,86	1/1:12,0:11:12.46:139,12,0
chr10	75018133	.	G	GGA	1821.25	PASS	AB=0.972;AC=22;AF=0.393;AN=56;BaseQRankSum=10.163;DP=477;FS=35.121;HRun=0;HaplotypeScore=222.9716;InbreedingCoeff=0.0814;MQ=39.52;MQ0=25;MQRankSum=-9.956;QD=6.46;ReadPosRankSum=-2.930;VQSLOD=1.6287;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,2:13:40.12:43,0,40	0/0:6,0:6:12.02:0,12,151	0/0:15,0:1:3.01:0,3,43	0/0:16,0:6:9.03:0,9,125	0/0:26,0:26:58.39:0,58,765	0/0:29,0:27:54.53:0,55,731	0/0:26,0:26:51.43:0,51,666	0/0:18,0:16:33.07:0,33,412	1/1:13,2:13:17.86:217,18,0	0/1:17,0:15:13.78:222,0,14	1/1:15,0:13:2.09:39,2,0	1/1:14,2:15:24.50:221,24,0	0/1:29,0:29:79.90:80,0,117	0/0:16,0:16:39.12:0,39,536	0/0:19,0:19:54.04:0,54,742	0/1:21,2:21:25.34:305,0,25	0/0:16,0:16:45.11:0,45,614	0/0:8,0:7:20.93:0,21,262	0/1:16,0:13:52.08:52,0,82	0/1:13,0:11:26.01:37,0,26	0/1:10,0:6:4.69:11,0,5	0/1:13,0:12:13.09:39,0,13	1/1:10,3:11:14.99:197,15,0	0/1:5,1:4:6.16:44,0,6	1/1:12,3:14:13.01:319,13,0	0/1:23,0:21:99:108,0,123	0/1:22,0:21:12.14:12,0,170	0/1:21,0:21:52.18:52,0,171
chr10	75018158	.	GGAGA	G	4223.35	PASS	AB=0.917;AC=32;AF=0.571;AN=56;BaseQRankSum=12.147;DP=429;FS=35.860;HRun=0;HaplotypeScore=148.3984;InbreedingCoeff=0.8487;MQ=44.06;MQ0=27;MQRankSum=-9.971;QD=20.60;ReadPosRankSum=0.581;VQSLOD=2.8291;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,2:10:0.46:94,0,0	0/0:6,0:6:15.04:0,15,363	0/0:35,0:4:2.96:0,3,19	0/0:28,0:6:11.76:0,12,166	0/0:24,0:24:67.03:0,67,1275	0/0:26,0:26:75.24:0,75,1318	0/0:23,0:23:65.98:0,66,1083	0/0:19,0:18:33.01:0,33,379	1/1:2,5:5:15.04:187,15,0	1/1:7,4:10:20.31:241,20,0	1/1:5,4:8:13.03:92,13,0	1/1:0,6:6:18.06:230,18,0	1/1:11,4:15:31.76:282,32,0	0/0:14,0:14:39.13:0,39,776	0/0:26,0:26:78.27:0,78,1716	1/1:9,5:13:35.96:416,36,0	0/0:17,0:16:45.13:0,45,798	0/0:6,0:6:15.05:0,15,233	0/1:14,0:12:0.55:248,0,1	1/1:14,0:14:27.31:379,27,0	1/1:12,0:11:27.21:288,27,0	1/1:5,5:10:22.18:212,22,0	1/1:4,1:3:8.97:78,9,0	1/1:3,0:3:4.36:48,4,0	1/1:5,2:6:13.54:135,14,0	1/1:21,0:20:38:443,38,0	1/1:25,0:24:34.13:528,34,0	1/1:22,0:22:26.80:323,27,0
chr10	75018166	.	GGAGA	G	2141.62	PASS	AB=0.964;AC=27;AF=0.482;AN=56;BaseQRankSum=13.592;DP=430;FS=54.328;HRun=0;HaplotypeScore=156.0007;InbreedingCoeff=0.4086;MQ=44.83;MQ0=26;MQRankSum=-12.707;QD=10.20;ReadPosRankSum=2.061;VQSLOD=1.3394;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,2:11:3.24:90,3,0	0/0:6,0:6:15.05:0,15,431	0/0:26,0:3:9.02:0,9,118	0/0:25,0:6:11.07:0,11,169	0/0:27,0:27:78.27:0,78,1892	0/0:25,0:25:72.19:0,72,1665	0/0:21,0:21:63.20:0,63,1483	0/0:21,0:17:51.12:0,51,957	1/1:3,5:6:14.53:179,15,0	0/1:8,4:11:16.08:229,0,16	1/1:4,4:7:11.79:88,12,0	1/1:1,6:7:21.01:244,21,0	1/1:11,4:15:13.29:234,13,0	0/0:14,0:14:42.11:0,42,963	0/0:28,0:28:84.29:0,84,2203	1/1:10,5:14:20:390,20,0	0/0:19,0:18:54.19:0,54,1290	0/0:6,0:6:18.06:0,18,365	0/1:14,0:11:14.42:14,0,224	0/1:14,0:14:99:109,0,294	0/1:16,0:15:17.09:17,0,365	1/1:7,5:12:19.83:207,20,0	1/1:4,2:4:8.61:92,9,0	1/1:2,0:2:0.97:16,1,0	1/1:3,2:5:13.54:136,14,0	0/1:21,0:20:99:206,0,405	0/1:25,0:25:25.07:25,0,595	0/1:19,0:19:63.62:64,0,499
chr10	75018174	.	GGAGA	G	2236.62	PASS	AB=0.952;AC=25;AF=0.446;AN=56;BaseQRankSum=12.957;DP=439;FS=58.909;HRun=0;HaplotypeScore=160.9354;InbreedingCoeff=0.4809;MQ=45.32;MQ0=21;MQRankSum=-11.636;QD=11.07;ReadPosRankSum=-0.269;VQSLOD=0.6887;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,2:13:2.76:99,0,3	0/0:8,0:8:21.07:0,21,540	0/0:21,0:6:18.06:0,18,338	0/0:28,0:7:12.02:0,12,175	0/0:30,0:30:90.31:0,90,2131	0/0:24,0:24:72.25:0,72,1746	0/0:22,0:21:63.22:0,63,1507	0/0:21,0:17:48.16:0,48,999	1/1:4,5:8:20.18:208,20,0	1/1:4,4:8:20.75:270,21,0	1/1:2,4:5:11.81:89,12,0	1/1:1,6:7:21.02:244,21,0	0/1:12,4:16:11.62:231,0,12	0/0:12,0:12:36.12:0,36,927	0/0:27,0:27:81.28:0,81,2139	1/1:11,5:15:38.89:421,39,0	0/0:20,0:19:57.20:0,57,1350	0/0:5,0:5:15.02:0,15,275	0/1:14,0:10:11.66:12,0,340	0/1:17,0:16:63.08:63,0,486	0/0:18,0:18:31:0,31,682	1/1:9,5:14:19.57:226,20,0	1/1:4,1:5:14.84:124,15,0	1/1:2,0:2:1.39:52,1,0	1/1:3,2:5:11.99:144,12,0	0/1:24,0:23:99:197,0,752	0/1:26,0:26:10.70:11,0,949	0/1:19,0:19:46.78:47,0,717
chr10	75018182	.	GGAGA	G	2078.27	PASS	AB=0.808;AC=20;AF=0.357;AN=56;BaseQRankSum=11.842;DP=475;FS=19.746;HRun=0;HaplotypeScore=171.5892;InbreedingCoeff=0.8066;MQ=43.99;MQ0=20;MQRankSum=-10.311;QD=15.99;ReadPosRankSum=-0.192;VQSLOD=1.7830;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,2:13:25.78:110,0,26	0/0:7,0:7:21.07:0,21,556	0/0:24,0:10:27.09:0,27,519	0/0:25,0:5:12.04:0,12,246	0/0:29,0:29:87.30:0,87,2106	0/0:26,0:26:75.24:0,75,1791	0/0:21,0:20:60.15:0,60,1438	0/0:22,0:18:54.15:0,54,1043	1/1:6,5:10:23.04:220,23,0	0/1:8,4:12:4.35:292,0,4	1/1:11,4:15:25.43:177,25,0	1/1:1,6:7:21.02:247,21,0	1/1:14,4:18:6.72:304,7,0	0/0:15,0:15:45.15:0,45,1117	0/0:27,0:27:81.28:0,81,2158	1/1:13,5:17:11.27:354,11,0	0/0:19,0:18:54.19:0,54,1302	0/0:4,0:4:12.04:0,12,259	0/0:14,0:10:29.28:0,29,498	0/0:20,0:19:49.70:0,50,838	0/0:20,0:20:59.04:0,59,993	1/1:9,5:14:23.36:238,23,0	1/1:6,1:7:12.01:101,12,0	1/1:4,0:4:3.92:39,4,0	1/1:9,2:11:23.14:201,23,0	0/0:25,0:24:45.19:0,45,1067	0/0:29,0:29:86.83:0,87,1626	0/0:18,0:18:50.25:0,50,1070
chr10	75018190	.	GGAGA	G	2604.88	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=11.832;DP=497;FS=25.279;HRun=0;HaplotypeScore=168.4716;InbreedingCoeff=0.9599;MQ=46.96;MQ0=18;MQRankSum=-8.990;QD=19.30;ReadPosRankSum=0.242;VQSLOD=1.4301;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,2:14:26.53:245,27,0	0/0:8,0:8:24.08:0,24,617	0/0:26,0:11:30.05:0,30,561	0/0:24,0:8:15.52:0,16,308	0/0:31,0:31:93.31:0,93,2199	0/0:26,0:26:75.26:0,75,1825	0/0:21,0:20:60.13:0,60,1403	0/0:21,0:18:54.19:0,54,1174	1/1:5,5:10:20.48:212,20,0	1/1:13,0:13:36.33:383,36,0	1/1:15,1:16:33.46:243,33,0	1/1:1,6:7:21.02:239,21,0	1/1:12,4:16:5.30:293,5,0	0/0:18,0:18:54.17:0,54,1223	0/0:28,0:28:84.29:0,84,2221	1/1:19,0:19:43.24:487,43,0	0/0:21,0:20:60.19:0,60,1387	0/0:5,0:5:15.05:0,15,297	0/0:17,0:14:38.31:0,38,705	0/0:22,0:21:60.65:0,61,1002	0/0:23,0:23:65.06:0,65,1123	1/1:8,5:13:26.41:295,26,0	1/1:9,0:9:19.15:142,19,0	1/1:5,0:5:5.93:40,6,0	1/1:13,0:13:23.26:246,23,0	0/0:22,0:21:43.34:0,43,1112	0/0:31,0:31:89.80:0,90,1706	0/0:18,0:18:50.36:0,50,1103
chr10	75020159	.	AAAAT	A	789.60	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=2.839;DP=388;FS=6.266;HRun=0;HaplotypeScore=75.1060;InbreedingCoeff=0.8162;MQ=40.31;MQ0=32;MQRankSum=-5.472;QD=16.45;ReadPosRankSum=1.058;VQSLOD=2.6937;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:10:21.07:0,21,446	0/0:10,0:10:21.07:0,21,492	./.	./.	0/0:19,0:19:42.14:0,42,1045	0/0:18,0:18:39.13:0,39,970	0/0:7,0:5:15.05:0,15,380	0/0:26,0:19:45.12:0,45,1035	0/0:13,0:13:27.09:0,27,613	1/1:5,7:9:18.05:288,18,0	1/1:3,5:7:6.02:105,6,0	0/0:7,0:7:6.02:0,6,111	0/0:17,0:17:30.10:0,30,713	0/0:10,0:9:21.07:0,21,473	0/0:18,0:18:27.09:0,27,662	1/1:8,8:14:12.04:209,12,0	0/0:27,0:26:57.15:0,57,1329	0/0:23,0:19:51.17:0,51,1204	0/0:18,0:16:42.10:0,42,1014	0/0:16,0:16:42.14:0,42,1026	0/0:9,0:6:6.02:0,6,151	0/0:7,0:5:3.01:0,3,76	0/0:6,0:6:12.04:0,12,301	0/0:6,0:6:6.02:0,6,153	1/1:6,6:11:21:333,21,0	0/0:27,0:27:66.23:0,66,1547	0/0:22,0:22:48.16:0,48,1187	0/0:8,0:8:20.99:0,21,455
chr10	75021043	.	C	CA	4119.60	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-1.030;DP=584;FS=4.818;HRun=7;HaplotypeScore=94.0296;InbreedingCoeff=0.9958;MQ=70.92;MQ0=0;MQRankSum=-4.479;QD=29.01;ReadPosRankSum=0.266;VQSLOD=3.6304;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,19:26:72.15:829,72,0	0/0:6,0:6:18.03:0,18,174	0/0:26,0:25:42.01:0,42,397	0/0:20,0:20:38.73:0,39,340	0/0:27,0:27:66.96:0,67,632	0/0:15,0:15:39.03:0,39,364	0/0:8,0:8:18.02:0,18,174	0/0:35,0:35:66.07:0,66,634	1/1:4,11:15:42.09:484,42,0	0/0:33,0:33:81.12:0,81,779	0/0:17,0:17:39.06:0,39,376	1/1:6,21:27:66.19:786,66,0	1/1:8,19:27:66.17:766,66,0	0/0:18,0:18:42.07:0,42,405	0/0:18,0:18:48.08:0,48,463	0/0:26,0:26:72.10:0,72,691	0/0:24,0:24:63.06:0,63,596	0/0:19,0:19:36.02:0,36,342	0/0:25,0:25:60.07:0,60,569	0/0:22,0:22:57.09:0,57,550	0/0:12,0:12:30.05:0,30,290	1/1:3,8:11:27.08:326,27,0	1/1:5,18:23:63.05:692,63,0	1/1:6,7:13:21.02:237,21,0	0/0:23,0:23:54.08:0,54,521	0/0:30,0:30:78.12:0,78,753	0/0:27,0:26:60.08:0,60,579	0/0:11,0:11:30.05:0,30,290
chr10	75021074	.	C	CA	3017.10	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-0.613;DP=562;FS=7.438;HRun=9;HaplotypeScore=116.1454;InbreedingCoeff=0.9827;MQ=71.81;MQ0=2;MQRankSum=-0.333;QD=23.76;ReadPosRankSum=-0.018;VQSLOD=2.7764;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:34.75:0,35,475	0/0:6,0:6:18:0,18,156	0/0:23,0:17:12.18:0,12,149	0/0:29,0:22:20.06:0,20,132	0/0:28,0:27:68.97:0,69,599	0/0:12,0:12:26.97:0,27,234	0/0:9,0:9:26.99:0,27,234	0/0:38,0:38:86.89:0,87,744	0/0:8,0:8:17.99:0,18,156	0/0:30,0:30:86.97:0,87,751	0/0:19,0:19:47.96:0,48,410	0/0:20,0:20:50.98:0,51,442	0/0:26,0:26:74.47:0,74,630	0/0:14,0:14:38.99:0,39,338	0/0:22,0:22:62.92:0,63,536	0/0:18,0:19:50.02:0,50,420	0/0:16,0:16:44.97:0,45,386	0/0:18,0:18:45.80:0,46,382	1/1:8,21:29:45.94:700,46,0	1/1:5,21:26:43.06:681,43,0	1/1:3,6:9:12.03:133,12,0	0/0:12,0:12:35.99:0,36,312	0/0:25,0:25:65.96:0,66,573	0/0:11,0:11:29.98:0,30,260	0/0:20,0:20:47.97:0,48,417	1/1:6,22:28:35.44:695,35,0	1/1:1,18:19:57.15:630,57,0	1/1:1,13:14:33.09:365,33,0
chr10	75021104	.	GA	G	4697.79	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=2.964;DP=561;FS=5.244;HRun=10;HaplotypeScore=116.7615;InbreedingCoeff=0.9721;MQ=76.15;MQ0=3;MQRankSum=-1.196;QD=22.59;ReadPosRankSum=3.496;VQSLOD=4.2289;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:24:56.97:495,57,0	0/0:10,0:10:27.07:0,27,299	0/0:33,0:23:41.26:0,41,359	0/0:30,0:19:37.72:0,38,359	0/0:26,2:27:26.09:0,26,737	0/0:21,0:21:54.15:0,54,597	0/0:10,1:11:7.05:0,7,297	0/0:27,0:27:31.22:0,31,558	1/1:0,10:10:29.99:260,30,0	1/1:2,26:28:77.98:677,78,0	1/1:1,18:19:53.99:468,54,0	1/1:6,11:17:41.95:355,42,0	1/1:1,20:21:53.99:469,54,0	0/0:13,0:13:30.08:0,30,332	0/0:23,0:23:63.17:0,63,691	1/1:2,17:19:41.99:365,42,0	0/0:13,0:13:36.10:0,36,398	0/0:20,0:20:46.92:0,47,533	0/0:24,1:25:42.94:0,43,642	0/0:27,1:28:49.74:0,50,765	0/0:2,0:2:6:0,6,56	1/1:1,12:13:35.99:312,36,0	1/1:4,21:25:65.95:569,66,0	1/1:2,11:13:29.99:260,30,0	1/1:0,19:19:53.99:468,54,0	0/0:25,1:26:46.13:0,46,724	0/0:23,0:22:57.10:0,57,611	0/0:17,0:17:51.11:0,51,543
chr10	75022992	.	CA	C	3429.03	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.559;DP=492;FS=7.683;HRun=3;HaplotypeScore=45.3545;InbreedingCoeff=0.9838;MQ=85.19;MQ0=0;MQRankSum=-1.993;QD=34.64;ReadPosRankSum=2.604;VQSLOD=3.9152;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.16:0,48,691	0/0:10,0:10:30.09:0,30,414	0/0:14,0:14:42.14:0,42,601	0/0:16,0:16:47.52:0,48,636	0/0:28,0:28:84.28:0,84,1205	0/0:18,0:17:51.13:0,51,695	0/0:12,0:12:36.07:0,36,462	0/0:42,0:42:99:0,108,1532	0/0:13,0:13:39.12:0,39,544	0/0:24,0:24:69.23:0,69,980	0/0:18,0:18:54.18:0,54,770	0/0:14,0:14:42.14:0,42,605	0/0:18,0:18:51.17:0,51,728	0/0:13,0:13:39.12:0,39,540	0/0:24,0:24:72.23:0,72,1019	0/0:19,0:19:57.18:0,57,800	0/0:23,0:23:66.22:0,66,951	0/0:13,0:13:36.12:0,36,519	1/1:0,19:19:57.17:694,57,0	1/1:0,29:29:81.25:1004,81,0	1/1:1,11:12:30.57:373,31,0	0/0:12,0:12:36.12:0,36,519	0/0:20,0:20:60.18:0,60,826	0/0:17,0:17:48.16:0,48,682	0/0:7,0:7:21.07:0,21,303	1/1:1,16:17:7.93:539,8,0	1/1:0,13:13:39.12:484,39,0	1/1:0,9:9:27.08:335,27,0
chr10	75024044	.	A	ATT	14790.63	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=7.155;DP=840;FS=0.557;HRun=4;HaplotypeScore=128.4148;InbreedingCoeff=1.0000;MQ=88.23;MQ0=1;MQRankSum=-4.646;QD=42.75;ReadPosRankSum=4.251;VQSLOD=3.4786;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:37:99:1715,99,0	0/0:13,0:13:39.13:0,39,520	0/0:35,0:35:99:0,102,1351	0/0:27,0:27:69.20:0,69,877	0/0:33,0:33:90.26:0,90,1165	0/0:30,0:30:78.24:0,78,1024	0/0:24,0:24:66.20:0,66,865	0/0:49,0:49:99:0,132,1724	1/1:6,30:36:75.21:1313,75,0	1/1:0,34:35:99:1782,99,0	1/1:1,24:25:63.09:1032,63,0	1/1:1,30:31:81.15:1357,81,0	1/1:1,35:36:93.23:1606,93,0	0/0:36,0:36:99:0,99,1266	0/0:38,0:38:99:0,111,1480	1/1:6,33:39:81.06:1425,81,0	0/0:34,0:34:99:0,99,1302	0/0:17,0:17:42.14:0,42,560	0/0:23,0:23:66.20:0,66,854	0/0:22,0:22:45.11:0,45,569	0/0:30,0:30:78.25:0,78,1039	1/1:4,27:31:83.97:1271,84,0	1/1:1,22:23:66.18:1154,66,0	1/1:0,23:24:57.19:1001,57,0	1/1:3,24:28:66.18:1135,66,0	0/0:31,0:31:84.26:0,84,1107	0/0:33,0:33:99:0,99,1289	0/0:19,0:19:45.02:0,45,513
chr10	75024316	.	AAAG	A	12607.10	PASS	AB=0.926;AC=23;AF=0.411;AN=56;BaseQRankSum=18.061;DP=734;FS=15.332;HRun=0;HaplotypeScore=112.6626;InbreedingCoeff=0.9265;MQ=79.23;MQ0=0;MQRankSum=-2.610;QD=37.30;ReadPosRankSum=5.086;VQSLOD=4.6365;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,42:45:99:1687,105,0	0/0:13,0:13:36.12:0,36,795	0/0:26,0:26:59.93:0,60,1120	0/0:14,0:14:25.24:0,25,570	0/0:36,0:36:99:0,108,2333	0/0:24,0:24:69.24:0,69,1524	0/0:22,0:22:60.21:0,60,1290	0/0:35,0:35:87.29:0,87,1868	1/1:3,23:26:66.22:1061,66,0	1/1:1,18:19:54.18:855,54,0	1/1:2,24:25:66.22:1060,66,0	1/1:2,30:32:75.26:1205,75,0	1/1:2,25:27:75.26:1205,75,0	0/0:33,0:33:93.32:0,93,2053	0/0:34,0:34:96.33:0,96,2087	1/1:2,40:41:99:1851,117,0	0/0:24,0:24:66.23:0,66,1439	0/0:19,0:19:54.19:0,54,1192	0/0:21,0:21:45.15:0,45,929	0/0:31,0:31:78.25:0,78,1663	0/0:20,0:20:60.21:0,60,1305	1/1:4,21:25:60.20:964,60,0	1/1:2,22:24:52.46:865,52,0	1/1:1,22:23:57.19:916,57,0	1/1:4,20:24:57.19:916,57,0	0/1:23,2:25:21.19:21,0,1449	0/0:33,0:33:99:0,99,2136	0/0:11,0:11:33.11:0,33,728
chr10	75024743	.	GAA	G	501	PASS	AB=0.801;AC=6;AF=0.111;AN=54;BaseQRankSum=-0.730;DP=537;FS=12.245;HRun=9;HaplotypeScore=96.3014;InbreedingCoeff=-0.1239;MQ=47.23;MQ0=22;MQRankSum=-4.401;QD=5.22;ReadPosRankSum=-0.378;VQSLOD=-0.5829;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:36:90.31:0,90,1475	0/0:4,0:4:12.04:0,12,197	./.	0/0:7,0:5:14.75:0,15,138	0/0:24,0:24:48.11:0,48,721	0/0:19,0:18:36.11:0,36,566	0/0:30,0:29:71.72:0,72,1092	0/0:21,0:21:60.13:0,60,917	0/0:14,0:12:30.07:0,30,455	0/0:11,0:11:18.90:0,19,257	0/0:15,0:14:28.59:0,29,373	0/0:30,0:28:65.99:0,66,1004	0/0:16,0:15:24.05:0,24,364	0/0:21,0:20:42.12:0,42,638	0/0:28,0:28:60.16:0,60,951	0/0:18,0:15:26.27:0,26,398	0/0:25,0:25:63.20:0,63,995	0/0:28,1:29:54.81:0,55,1056	0/1:11,8:18:99:166,0,226	0/1:8,9:14:99:119,0,102	0/1:6,1:5:8.87:9,0,78	0/0:14,0:14:24.08:0,24,380	0/0:22,0:22:60:0,60,832	0/0:23,0:20:48.15:0,48,761	0/0:18,0:19:30.35:0,30,432	0/1:17,5:18:99:142,0,158	0/1:15,7:18:24.74:152,0,25	0/1:9,0:7:36:36,0,62
chr10	75024757	.	CAAAA	C	3873.85	PASS	AB=0.592;AC=13;AF=0.232;AN=56;BaseQRankSum=2.216;DP=596;FS=9.070;HRun=14;HaplotypeScore=115.1939;InbreedingCoeff=0.8192;MQ=50.61;MQ0=19;MQRankSum=1.740;QD=24.36;ReadPosRankSum=7.174;VQSLOD=1.6625;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,27:37:63.23:892,63,0	0/0:7,0:7:21.03:0,21,444	0/0:14,0:3:3.01:0,3,68	0/0:11,0:9:18.03:0,18,310	0/0:21,0:25:59.85:0,60,1092	0/0:15,0:16:39.10:0,39,687	0/0:29,0:32:81.13:0,81,1521	0/0:33,0:34:93.17:0,93,1798	1/1:4,9:11:24.05:340,24,0	0/0:18,0:16:35.06:0,35,392	0/0:18,0:18:37.23:0,37,419	0/1:9,18:27:12.90:630,0,13	1/1:4,10:14:20.85:297,21,0	0/0:21,0:20:42.10:0,42,751	0/0:23,0:26:57.11:0,57,1007	0/0:21,0:18:41.80:0,42,423	0/0:27,0:29:81.23:0,81,1643	0/0:27,0:31:66.13:0,66,1141	0/0:29,0:28:65.55:0,66,977	0/0:20,0:17:25.47:0,25,333	0/0:7,0:5:6.02:0,6,106	1/1:2,11:13:3.96:238,4,0	1/1:2,23:25:60.14:841,60,0	1/1:7,18:22:45.12:637,45,0	0/0:19,0:19:32.47:0,32,407	0/0:22,0:18:27.56:0,28,370	0/0:22,0:15:21.91:0,22,277	0/0:11,0:8:17.27:0,17,267
chr10	75025698	.	T	TA	11714.30	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-2.058;DP=680;FS=0.640;HRun=9;HaplotypeScore=70.8559;InbreedingCoeff=0.9617;MQ=70.79;MQ0=0;MQRankSum=-2.766;QD=26.68;ReadPosRankSum=2.512;VQSLOD=5.2368;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:43.36:467,43,0	0/0:15,0:15:41.99:0,42,365	0/0:13,0:13:12.38:0,12,199	0/0:5,0:5:8.99:0,9,78	0/0:37,0:37:99:0,105,911	0/0:25,0:25:68.97:0,69,599	0/0:17,0:17:47.97:0,48,413	0/0:43,0:44:99:0,119,1016	1/1:3,26:30:81.21:888,81,0	1/1:6,29:35:87.24:962,87,0	1/1:6,29:36:66.99:935,67,0	1/1:2,23:25:36.95:619,37,0	1/1:5,15:20:45.12:494,45,0	0/0:24,0:24:68.96:0,69,595	0/0:33,0:32:47.51:0,48,575	1/1:5,28:33:81.22:896,81,0	0/0:19,0:19:41.99:0,42,365	0/0:9,0:9:23.99:0,24,208	1/1:3,20:23:60.16:664,60,0	1/1:4,20:24:60.16:664,60,0	1/1:1,19:20:54.15:597,54,0	1/1:3,15:18:42.11:465,42,0	1/1:10,27:37:49.15:771,49,0	1/1:2,5:7:12.03:133,12,0	1/1:2,28:30:58.17:870,58,0	1/1:6,28:34:78.21:863,78,0	1/1:2,36:38:99:1155,105,0	1/1:1,9:10:4.03:273,4,0
chr10	75026652	.	G	GA	5878.63	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-13.417;DP=752;FS=2.854;HRun=6;HaplotypeScore=81.2869;InbreedingCoeff=0.9983;MQ=75.29;MQ0=0;MQRankSum=-1.053;QD=33.79;ReadPosRankSum=2.300;VQSLOD=4.6850;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:75.16:0,75,765	0/0:16,0:16:42.09:0,42,429	0/0:17,1:18:38.18:0,38,349	0/0:10,0:10:18.01:0,18,174	0/0:27,0:27:78.18:0,78,795	0/0:29,0:29:84.19:0,84,857	0/0:23,0:23:51.11:0,51,520	0/0:43,0:43:99:0,105,1066	0/0:20,0:20:57.11:0,57,574	0/0:40,0:40:99:0,111,1132	0/0:24,0:24:57.12:0,57,581	0/0:30,0:30:84.18:0,84,851	0/0:34,0:34:90.17:0,90,909	0/0:31,0:31:87.19:0,87,887	0/0:27,0:27:72.16:0,72,734	0/0:39,0:39:99:0,111,1126	0/0:22,0:22:45.09:0,45,459	0/0:16,0:16:45.10:0,45,458	1/1:2,15:17:45.13:554,45,0	1/1:1,35:36:99:1229,99,0	1/1:1,15:16:39.12:491,39,0	0/0:25,0:25:63.14:0,63,643	0/0:31,0:31:87.11:0,87,859	0/0:14,0:14:39.09:0,39,398	0/0:29,0:29:81.17:0,81,819	1/1:6,32:38:96.29:1190,96,0	1/1:2,49:51:99:1849,147,0	1/1:1,15:16:45.14:566,45,0
chr10	75027931	.	AAC	A	1167.33	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=3.172;DP=628;FS=6.697;HRun=0;HaplotypeScore=108.5799;InbreedingCoeff=0.8588;MQ=65.74;MQ0=6;MQRankSum=3.277;QD=8.98;ReadPosRankSum=-1.975;VQSLOD=2.4757;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:18.60:0,19,277	0/0:8,0:8:14.99:0,15,287	0/1:22,0:13:11.61:12,0,168	0/0:18,0:15:28.52:0,29,211	0/0:38,0:38:75.15:0,75,1325	0/0:23,0:23:65.88:0,66,880	0/0:10,0:10:30.06:0,30,409	0/0:35,0:35:93.58:0,94,1192	0/0:12,0:12:34.38:0,34,202	1/1:28,0:28:46.93:302,47,0	1/1:29,2:31:52.38:417,52,0	0/0:19,0:19:32.31:0,32,202	0/0:23,0:23:31.68:0,32,289	0/0:9,0:9:19.41:0,19,198	0/0:31,0:31:92.90:0,93,1229	1/1:29,2:31:36.29:454,36,0	0/0:27,0:27:69.71:0,70,842	0/0:12,0:12:32.89:0,33,415	0/0:20,0:20:24.05:0,24,536	0/0:39,0:38:91.21:0,91,1122	0/0:5,0:5:15.05:0,15,196	0/0:25,0:24:43.60:0,44,296	0/0:23,0:23:30.49:0,30,276	0/0:13,0:13:26.69:0,27,144	1/1:16,1:17:14.61:145,15,0	0/0:28,0:28:47.12:0,47,782	0/0:29,0:29:60.02:0,60,647	0/0:26,0:25:45.11:0,45,564
chr10	75027932	.	AC	A	2605.12	PASS	AB=0.964;AC=14;AF=0.250;AN=56;BaseQRankSum=0.911;DP=633;FS=7.134;HRun=1;HaplotypeScore=93.5710;InbreedingCoeff=0.4480;MQ=64.10;MQ0=6;MQRankSum=0.986;QD=11.79;ReadPosRankSum=-1.787;VQSLOD=1.1433;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:9.86:0,10,140	0/0:9,0:9:13.51:0,14,212	0/1:23,0:12:7.38:7,0,145	0/1:16,2:15:2.25:2,0,154	0/0:38,0:38:71.44:0,71,972	0/0:25,0:25:59.67:0,60,678	0/0:10,0:10:30.06:0,30,334	0/0:38,0:38:94.37:0,94,995	0/0:12,0:12:0.96:0,1,82	1/1:3,23:26:63.31:704,63,0	1/1:3,27:30:72.65:727,73,0	0/1:19,0:19:6.38:6,0,83	0/1:20,3:23:88.10:88,0,120	0/1:10,0:10:0.07:0,0,130	0/0:31,0:31:86.24:0,86,951	1/1:21,10:31:81.95:919,82,0	0/0:26,0:26:68.59:0,69,665	0/0:14,0:14:30.42:0,30,321	0/0:19,0:19:42.52:0,43,419	0/0:40,0:39:99:0,103,838	0/0:6,0:6:15.01:0,15,136	0/1:25,0:24:21:21,0,37	0/0:24,0:24:8.93:0,9,128	0/0:13,0:13:5.49:0,5,17	1/1:2,14:16:25.27:298,25,0	0/0:26,1:27:33.61:0,34,593	0/0:29,0:29:59.66:0,60,474	0/0:26,0:25:44.99:0,45,398
chr10	75027933	.	CA	C	2273.09	PASS	AB=0.992;AC=19;AF=0.339;AN=56;BaseQRankSum=1.690;DP=631;FS=4.832;HRun=12;HaplotypeScore=93.8874;InbreedingCoeff=0.6116;MQ=64.81;MQ0=6;MQRankSum=2.099;QD=8.58;ReadPosRankSum=2.271;VQSLOD=2.9973;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,13:23:9.38:256,9,0	0/0:6,0:9:20.68:0,21,182	0/1:23,1:12:10.27:12,0,10	0/0:20,0:16:20.39:0,20,176	0/0:36,2:39:61.37:0,61,848	0/0:22,2:25:22.48:0,22,561	0/0:9,0:9:24.05:0,24,243	0/0:37,1:39:69.86:0,70,868	1/1:3,8:11:23.90:186,24,0	0/1:26,0:26:35.48:112,0,35	0/1:30,0:30:0.64:119,0,1	1/1:2,14:18:36.94:267,37,0	1/1:9,13:23:17.12:299,17,0	0/0:9,0:9:1.44:0,1,155	0/0:30,2:32:34.66:0,35,701	0/1:31,0:31:29.56:149,0,30	0/0:25,0:26:36.64:0,37,507	0/0:13,1:14:9.80:0,10,272	0/0:21,0:21:23.27:0,23,137	0/0:37,0:37:74.91:0,75,342	0/0:6,0:6:13.72:0,14,61	1/1:4,20:24:60.33:452,60,0	1/1:4,15:23:22.75:294,23,0	1/1:0,12:13:34.91:261,35,0	0/1:16,0:16:8.89:64,0,9	0/0:26,0:26:32.72:0,33,225	0/0:26,0:27:43.70:0,44,193	0/0:25,0:25:41.17:0,41,184
chr10	75027934	.	A	AAAC	2622.73	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-0.532;DP=630;FS=2.610;HRun=0;HaplotypeScore=121.3090;InbreedingCoeff=0.5597;MQ=64.72;MQ0=6;MQRankSum=1.600;QD=11.11;ReadPosRankSum=-0.098;VQSLOD=2.9083;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:24:47.42:47,0,361	0/0:9,0:9:26.63:0,27,324	0/0:24,0:12:6.18:0,6,189	0/0:20,0:16:27.21:0,27,277	0/0:39,0:39:99:0,106,1518	0/0:26,0:26:48.85:0,49,888	0/0:10,0:10:24.07:0,24,365	0/0:39,0:39:99:0,108,1363	0/1:10,0:10:16.45:16,0,182	0/0:27,0:27:40.95:0,41,501	0/0:28,0:28:59.08:0,59,618	0/1:18,0:18:2.86:3,0,300	0/0:23,0:23:56.44:0,56,536	0/0:9,0:9:22.57:0,23,287	0/0:31,0:31:90.24:0,90,1295	0/0:31,0:31:44.37:0,44,659	0/0:25,0:25:29.35:0,29,786	0/0:15,0:15:35.98:0,36,460	1/1:19,2:21:34.91:424,35,0	1/1:37,1:37:95.10:808,95,0	1/1:6,0:6:14.98:126,15,0	0/1:25,0:24:37.73:38,0,386	0/0:23,0:23:7.54:0,8,410	0/1:13,0:13:33.65:34,0,217	0/0:15,0:15:24.06:0,24,291	1/1:26,0:26:7.49:447,7,0	1/1:24,3:27:47.76:493,48,0	1/1:26,0:25:44.95:377,45,0
chr10	75027935	.	A	AAC	4761.60	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.327;DP=638;FS=2.227;HRun=0;HaplotypeScore=102.2768;InbreedingCoeff=0.9845;MQ=64.88;MQ0=6;MQRankSum=-0.265;QD=31.96;ReadPosRankSum=3.200;VQSLOD=6.8230;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:52.94:0,53,451	0/0:9,0:9:26.65:0,27,301	0/0:24,0:11:15.89:0,16,220	0/0:21,0:17:28.65:0,29,316	0/0:41,0:41:99:0,109,1449	0/0:26,0:26:74.42:0,74,942	0/0:9,0:9:27.07:0,27,382	0/0:40,0:40:99:0,111,1438	0/0:10,0:10:29.01:0,29,236	0/0:27,0:27:67.67:0,68,647	0/0:28,0:28:73.21:0,73,641	0/0:18,0:18:43.96:0,44,362	0/0:23,0:23:59.98:0,60,549	0/0:9,0:9:24.03:0,24,304	0/0:31,0:31:93.25:0,93,1270	0/0:30,0:30:78.39:0,78,768	0/0:25,0:25:48.97:0,49,776	0/0:14,0:15:35.98:0,36,465	1/1:6,16:23:31.41:668,31,0	1/1:4,35:38:98.64:1471,99,0	1/1:1,5:6:15.05:249,15,0	0/0:26,0:25:36.08:0,36,464	0/0:23,0:23:42.08:0,42,424	0/0:13,0:13:34.48:0,34,268	0/0:15,0:15:24.07:0,24,280	1/1:3,22:25:10.99:930,11,0	1/1:6,23:29:48.04:697,48,0	1/1:3,24:26:45.13:746,45,0
chr10	75027936	.	A	AC	1429.92	PASS	AB=0.980;AC=10;AF=0.179;AN=56;BaseQRankSum=4.653;DP=647;FS=1.796;HRun=0;HaplotypeScore=101.9616;InbreedingCoeff=0.7729;MQ=64.73;MQ0=6;MQRankSum=0.869;QD=9.53;ReadPosRankSum=5.106;VQSLOD=3.8165;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:62.26:0,62,466	0/0:9,0:9:22.75:0,23,271	0/0:24,0:11:24.26:0,24,209	0/0:21,0:17:32.26:0,32,327	0/0:43,0:43:99:0,113,1427	0/0:26,0:26:70.82:0,71,883	0/0:9,0:9:27.08:0,27,359	0/0:41,0:41:99:0,116,1423	0/0:10,0:10:29.86:0,30,227	0/0:28,0:28:68.60:0,69,608	0/0:30,0:30:73.89:0,74,598	0/0:18,0:18:44.79:0,45,339	0/0:23,0:23:59.78:0,60,475	0/0:9,0:9:24.02:0,24,282	0/0:33,0:33:93.23:0,93,1180	0/0:30,0:30:81.99:0,82,751	0/0:24,0:24:43.94:0,44,701	0/0:17,0:17:35.92:0,36,429	0/1:23,1:24:46.33:230,0,46	1/1:37,1:37:82.39:529,82,0	1/1:6,0:6:14.62:83,15,0	0/0:26,0:25:68.24:0,68,485	0/0:22,0:22:53.71:0,54,416	0/0:13,0:13:35.79:0,36,261	0/0:15,0:15:30.01:0,30,290	0/1:26,0:26:6.80:277,0,7	1/1:28,1:29:25.29:254,25,0	1/1:26,1:26:22.58:225,23,0
chr10	75029124	.	GA	G	3469.95	PASS	AB=0.900;AC=23;AF=0.411;AN=56;BaseQRankSum=13.437;DP=574;FS=16.903;HRun=10;HaplotypeScore=69.1383;InbreedingCoeff=0.9209;MQ=75.68;MQ0=0;MQRankSum=-0.758;QD=15.02;ReadPosRankSum=1.424;VQSLOD=2.4253;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:12:32.99:286,33,0	0/1:8,1:9:5.01:5,0,170	0/0:17,0:16:21.91:0,22,208	0/0:11,1:12:29.12:0,29,245	0/0:29,0:29:69.17:0,69,748	0/0:26,0:26:72.19:0,72,789	0/0:11,0:11:30.08:0,30,332	0/0:36,0:36:78.68:0,79,860	1/1:1,20:21:59.99:521,60,0	1/1:0,0:24:48.89:143,49,0	1/1:1,0:23:42.77:126,43,0	1/1:0,23:23:68.99:599,69,0	1/1:3,15:18:44.98:391,45,0	0/0:17,0:17:45.10:0,45,482	0/0:25,0:25:66.18:0,66,730	1/1:1,0:20:22.86:83,23,0	0/0:13,1:14:4.03:0,4,273	0/0:12,0:12:27.07:0,27,295	0/0:26,0:26:63.16:0,63,690	0/0:34,1:36:73.04:0,73,1004	0/0:12,0:14:32.75:0,33,327	1/1:5,14:19:35.98:313,36,0	1/1:2,26:29:80.01:681,80,0	1/1:2,8:10:23.99:208,24,0	1/1:2,0:23:38.70:114,39,0	0/0:19,0:19:51.14:0,51,564	0/0:39,1:39:76.18:0,76,1038	0/0:7,0:9:20.89:0,21,213
chr10	75029469	.	T	TTCAAC	31059.23	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-14.990;DP=713;FS=6.041;HRun=0;HaplotypeScore=113.7392;InbreedingCoeff=0.9999;MQ=86.67;MQ0=0;MQRankSum=-11.930;QD=72.57;ReadPosRankSum=3.264;VQSLOD=6.1289;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:24:63.22:1836,63,0	0/0:12,0:12:36.12:0,36,746	0/0:25,0:25:63.17:0,63,1159	0/0:28,0:28:69.24:0,69,1363	0/0:39,0:38:99:0,114,2305	0/0:35,0:35:96.30:0,96,1883	0/0:24,0:24:57.16:0,57,1106	0/0:27,0:27:75.24:0,75,1454	1/1:2,18:22:51.18:1526,51,0	1/1:4,15:21:60.21:1725,60,0	1/1:6,21:29:69.06:1793,69,0	1/1:3,20:23:63.22:1897,63,0	1/1:4,29:37:90.31:2675,90,0	0/0:33,0:33:84.29:0,84,1740	0/0:21,0:21:54.16:0,54,1029	1/1:7,25:32:75.26:2192,75,0	0/0:29,0:29:78.24:0,78,1576	0/0:12,0:12:30.03:0,30,578	1/1:2,11:14:42.12:1137,42,0	1/1:7,30:37:93.32:2619,93,0	1/1:3,14:17:36.12:1009,36,0	1/1:5,16:21:57.19:1583,57,0	1/1:6,22:29:69.10:1957,69,0	1/1:5,19:24:51.56:1452,52,0	1/1:2,21:25:66.23:1934,66,0	1/1:3,25:28:84.29:2495,84,0	1/1:3,26:32:72.12:2132,72,0	1/1:4,9:13:39.13:1097,39,0
chr10	75030684	.	GTT	G	9334.04	PASS	AB=0.923;AC=35;AF=0.625;AN=56;BaseQRankSum=10.442;DP=612;FS=13.248;HRun=12;HaplotypeScore=77.8941;InbreedingCoeff=0.9447;MQ=69.79;MQ0=2;MQRankSum=0.346;QD=23.05;ReadPosRankSum=3.863;VQSLOD=3.1047;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:31:71.88:714,72,0	0/0:16,0:16:35.57:0,36,460	0/1:11,0:12:3.67:4,0,244	0/0:11,1:9:17.07:0,17,203	0/0:26,0:28:75.25:0,75,1101	0/0:33,0:35:86.74:0,87,1202	0/0:8,0:11:31.57:0,32,381	0/0:40,0:42:99:0,101,1305	1/1:2,16:18:42.07:427,42,0	1/1:5,27:31:78.12:779,78,0	1/1:2,18:21:50.83:500,51,0	1/1:3,19:23:56.83:561,57,0	1/1:2,25:28:60.90:601,61,0	0/0:15,0:15:39.13:0,39,575	0/0:21,0:21:25.81:0,26,666	1/1:2,32:36:83.62:888,84,0	0/0:16,0:16:33.08:0,33,469	0/0:10,0:10:24.08:0,24,356	1/1:5,11:16:33.03:328,33,0	1/1:3,26:29:72.07:732,72,0	1/1:5,10:15:30.04:305,30,0	1/1:0,14:14:33.06:335,33,0	1/1:0,14:15:44.84:439,45,0	1/1:0,13:13:36.08:366,36,0	1/1:3,24:28:56.84:632,57,0	1/1:6,21:28:59.76:583,60,0	1/1:5,24:29:69.11:702,69,0	1/1:0,15:16:44.84:439,45,0
chr10	75032290	.	A	AC	2663.15	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-8.901;DP=613;FS=2.669;HRun=7;HaplotypeScore=67.5503;InbreedingCoeff=0.9709;MQ=86.22;MQ0=1;MQRankSum=-1.082;QD=23.99;ReadPosRankSum=-0.573;VQSLOD=3.7518;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:78.12:0,78,752	0/0:6,0:6:15.02:0,15,145	0/0:22,0:21:9.67:0,10,329	0/0:24,0:23:51.04:0,51,483	0/0:13,0:13:30.05:0,30,289	0/0:23,0:23:63.10:0,63,608	0/0:23,0:23:60.09:0,60,579	0/0:19,0:19:39.03:0,39,368	0/0:16,0:16:48.08:0,48,462	0/0:20,0:20:47.92:0,48,458	0/0:12,0:12:27.04:0,27,260	0/0:40,0:40:78.79:0,79,957	0/0:19,0:19:54.04:0,54,509	0/0:17,0:17:48.08:0,48,462	0/0:25,0:25:69.09:0,69,660	0/0:33,0:33:90.12:0,90,860	0/0:54,0:55:99:0,146,1378	0/0:22,0:22:63.10:0,63,608	1/1:5,18:23:54.17:652,54,0	1/1:0,7:7:15.05:181,15,0	1/1:5,34:39:84.26:1015,84,0	0/0:13,0:13:30.03:0,30,284	0/0:16,0:16:39.06:0,39,376	0/0:30,0:30:84.14:0,84,811	0/0:19,0:19:50.98:0,51,479	1/1:3,10:13:30.08:351,30,0	1/1:3,22:25:44.93:539,45,0	1/1:1,3:4:9.03:109,9,0
chr10	75032907	.	CT	C	1338	PASS	AB=0.764;AC=33;AF=0.611;AN=54;BaseQRankSum=2.009;DP=475;FS=0.521;HRun=14;HaplotypeScore=58.1778;InbreedingCoeff=0.4868;MQ=77.04;MQ0=6;MQRankSum=0.509;QD=4.68;ReadPosRankSum=2.978;VQSLOD=1.2466;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,24:31:29.71:206,30,0	0/0:4,0:4:2.99:0,3,25	0/0:48,0:21:17.47:0,17,134	0/0:40,1:20:14.23:0,14,113	0/0:3,0:3:6:0,6,52	0/0:12,0:13:23.85:0,24,191	0/1:17,3:20:2.15:2,0,261	0/0:15,2:17:6.10:0,6,176	1/1:4,12:16:17.73:124,18,0	1/1:6,10:17:31.67:199,32,0	1/1:1,2:3:5.95:41,6,0	0/1:3,12:15:6.03:85,0,6	0/1:3,11:14:15.03:15,0,22	0/0:22,0:22:5.53:0,6,281	0/1:15,3:19:1.15:1,0,264	1/1:4,8:12:8.85:62,9,0	0/0:36,0:36:47.85:0,48,516	0/1:32,1:33:45.70:46,0,372	1/1:5,5:11:13.80:83,14,0	1/1:1,2:3:5.95:41,6,0	1/1:10,15:26:22.80:150,23,0	1/1:1,2:3:5.46:30,5,0	1/1:1,1:3:5.01:26,5,0	1/1:7,15:23:0.92:142,1,0	1/1:9,6:15:5.87:41,6,0	1/1:7,9:16:20.71:144,21,0	1/1:4,2:6:11.82:81,12,0	./.
chr10	75034649	.	C	CT	3207.73	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-9.168;DP=620;FS=0.802;HRun=10;HaplotypeScore=62.9653;InbreedingCoeff=0.9089;MQ=77.67;MQ0=0;MQRankSum=-1.926;QD=21.10;ReadPosRankSum=2.312;VQSLOD=4.6652;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:62.80:0,63,508	0/0:11,0:11:26.95:0,27,222	0/0:13,0:14:2.85:0,3,101	0/0:16,0:16:1.99:0,2,68	0/0:33,0:33:83.87:0,84,686	0/0:25,0:25:65.92:0,66,542	0/0:26,0:26:67.94:0,68,545	0/0:36,2:38:7.85:0,8,472	0/0:18,0:19:46.98:0,47,375	0/0:23,0:24:49.95:0,50,398	0/0:15,0:15:44.91:0,45,362	0/0:19,0:19:44.90:0,45,363	0/0:16,0:17:43.96:0,44,348	0/0:21,0:22:52.95:0,53,422	0/0:18,0:18:47.82:0,48,384	0/0:27,0:27:53.88:0,54,438	0/0:13,0:13:32.91:0,33,263	0/0:11,0:13:24.98:0,25,184	1/1:6,18:26:16.71:572,17,0	1/1:3,23:29:55.09:642,55,0	1/1:9,23:34:24.89:695,25,0	0/0:19,0:19:50.94:0,51,419	0/0:26,0:26:50.92:0,51,419	0/0:15,0:15:41.93:0,42,340	0/0:29,1:32:46:0,46,549	1/1:4,16:20:48.10:503,48,0	1/1:4,21:26:47.95:493,48,0	1/1:1,16:17:26.50:487,26,0
chr10	75035244	.	ATTTGTAG	A	16751.61	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=18.116;DP=654;FS=0.000;HRun=0;HaplotypeScore=166.1259;InbreedingCoeff=0.9983;MQ=73.34;MQ0=0;MQRankSum=-18.832;QD=60.91;ReadPosRankSum=4.414;VQSLOD=4.3964;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:39.13:988,39,0	0/0:15,0:15:42.14:0,42,1647	0/0:22,0:21:54.15:0,54,1733	0/0:16,0:16:36.70:0,37,1226	0/0:32,0:32:93.32:0,93,3402	0/0:24,0:24:72.23:0,72,2751	0/0:12,0:12:27.09:0,27,1033	0/0:25,0:25:66.22:0,66,2487	1/1:0,32:32:84.29:2179,84,0	1/1:6,25:31:75.24:1829,75,0	1/1:2,31:33:87.30:2128,87,0	1/1:0,16:16:39.13:1012,39,0	1/1:2,19:21:54.19:1401,54,0	0/0:21,0:21:57.18:0,57,2065	0/0:28,0:28:78.27:0,78,3088	1/1:3,28:31:72.25:1867,72,0	0/0:30,0:30:84.23:0,84,2966	0/0:9,0:9:24.06:0,24,814	0/0:19,0:19:54.19:0,54,2114	0/0:40,0:40:99:0,120,4721	0/0:17,0:17:51.18:0,51,1999	1/1:2,14:16:36.12:911,36,0	1/1:3,29:32:84.07:2178,84,0	1/1:1,11:12:18.06:467,18,0	1/1:4,27:31:69.24:1791,69,0	0/0:27,0:27:75.26:0,75,2995	0/0:32,0:32:90.31:0,90,3525	0/0:10,0:10:30.10:0,30,1067
chr10	75035732	.	CAG	C	3193.37	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.001;DP=704;FS=6.348;HRun=0;HaplotypeScore=79.0898;InbreedingCoeff=0.9996;MQ=83.10;MQ0=1;MQRankSum=-2.176;QD=31.62;ReadPosRankSum=2.421;VQSLOD=5.4310;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.27:0,87,1534	0/0:10,0:10:27.09:0,27,486	0/0:28,0:27:75.25:0,75,1295	0/0:25,0:24:65.96:0,66,1144	0/0:39,0:39:99:0,111,1960	0/0:26,0:26:75.24:0,75,1315	0/0:17,0:17:45.14:0,45,767	0/0:32,0:32:84.27:0,84,1448	0/0:23,0:23:63.22:0,63,1133	1/1:2,24:25:69.23:961,69,0	1/1:3,19:22:48.16:671,48,0	0/0:30,0:30:81.26:0,81,1414	0/0:19,0:19:51.16:0,51,882	0/0:20,0:20:54.18:0,54,961	0/0:27,0:27:78.27:0,78,1386	1/1:0,28:28:66.22:924,66,0	0/0:20,0:20:51.17:0,51,918	0/0:15,0:15:42.09:0,42,680	0/0:11,0:11:33.11:0,33,566	0/0:46,0:46:99:0,132,2332	0/0:20,0:20:60.21:0,60,1072	0/0:25,0:25:75.26:0,75,1327	0/0:35,0:35:99:0,102,1756	0/0:15,0:15:45.15:0,45,801	1/1:3,22:25:57.19:798,57,0	0/0:35,0:35:99:0,99,1784	0/0:34,0:33:96.33:0,96,1698	0/0:21,0:21:60.21:0,60,1080
chr10	75035935	.	GATA	G	9629.96	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.631;DP=669;FS=18.719;HRun=0;HaplotypeScore=100.0282;InbreedingCoeff=0.9988;MQ=79.59;MQ0=0;MQRankSum=-4.207;QD=39.47;ReadPosRankSum=3.566;VQSLOD=4.6182;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:45.15:733,45,0	0/0:8,0:8:21.07:0,21,469	0/0:22,0:22:60.20:0,60,1243	0/0:18,0:18:45.15:0,45,902	0/0:37,0:37:99:0,108,2316	0/0:29,0:29:87.28:0,87,1897	0/0:18,0:18:48.16:0,48,1071	0/0:55,0:55:99:0,138,2989	1/1:1,25:26:66.22:1064,66,0	1/1:1,15:16:48.16:767,48,0	1/1:3,21:24:60.20:958,60,0	1/1:1,28:29:72.25:1173,72,0	1/1:1,16:17:36.12:588,36,0	0/0:30,0:30:81.26:0,81,1729	0/0:22,0:22:66.12:0,66,1424	1/1:3,25:28:66.23:1078,66,0	0/0:29,0:29:84.23:0,84,1746	0/0:15,0:15:45.15:0,45,1005	0/0:22,0:22:66.21:0,66,1414	0/0:27,0:27:72.23:0,72,1549	0/0:18,0:18:51.18:0,51,1139	1/1:1,33:34:78.26:1245,78,0	1/1:1,20:21:48.16:779,48,0	1/1:1,13:14:30.10:490,30,0	1/1:1,18:19:48.16:756,48,0	0/0:28,1:29:26.22:0,26,1478	0/0:38,0:38:99:0,102,2175	0/0:8,0:8:24.08:0,24,533
chr10	75037464	.	TA	T	3189.81	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=0.304;DP=510;FS=1.225;HRun=11;HaplotypeScore=68.8188;InbreedingCoeff=0.9261;MQ=83.50;MQ0=1;MQRankSum=-0.009;QD=15.48;ReadPosRankSum=4.680;VQSLOD=4.3744;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:41.95:345,42,0	0/0:4,0:4:12.03:0,12,128	0/1:22,0:19:4.02:4,0,82	0/0:22,2:18:9.37:0,9,119	0/0:24,0:24:57.10:0,57,596	0/0:22,0:22:47.22:0,47,566	0/0:9,0:9:21.05:0,21,224	0/0:32,0:32:75.15:0,75,773	1/1:1,7:9:20.02:154,20,0	1/1:4,18:22:50.89:415,51,0	1/1:2,22:24:59.88:487,60,0	1/1:2,11:13:26.96:222,27,0	1/1:3,18:21:19.06:361,19,0	0/0:22,2:24:10.87:0,11,526	0/0:22,0:22:51.13:0,51,544	1/1:0,17:17:47.95:394,48,0	0/0:19,0:19:45.07:0,45,468	0/0:13,0:13:33.08:0,33,351	0/0:18,0:18:38.83:0,39,379	0/0:15,0:15:39.02:0,39,383	0/0:13,0:13:24.93:0,25,338	1/1:4,10:14:32.94:268,33,0	1/1:2,14:16:35.94:296,36,0	1/1:1,9:10:20.97:172,21,0	1/1:5,15:20:35.95:296,36,0	0/0:24,1:25:32.65:0,33,535	0/0:26,0:26:32.19:0,32,508	0/0:14,0:14:30.02:0,30,305
chr10	75037693	.	TG	T	2945.61	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=11.891;DP=559;FS=2.680;HRun=1;HaplotypeScore=93.6931;InbreedingCoeff=0.8847;MQ=67.75;MQ0=15;MQRankSum=-4.416;QD=10.34;ReadPosRankSum=-2.331;VQSLOD=0.8373;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,3:32:26.43:303,26,0	0/0:8,0:8:22.58:0,23,243	0/0:36,0:19:36.51:0,37,369	0/0:45,0:15:31.76:0,32,299	0/0:28,0:28:81.09:0,81,963	0/0:30,0:30:87.14:0,87,1058	0/0:12,0:12:36.10:0,36,450	0/0:36,0:35:95.79:0,96,1094	0/1:8,0:8:1.21:43,0,1	1/1:17,2:19:38.53:257,39,0	1/1:21,0:19:43.15:219,43,0	0/1:14,0:13:6.51:7,0,9	1/1:16,1:17:13.42:149,13,0	0/0:17,0:17:51.15:0,51,643	0/0:19,0:19:51.12:0,51,616	1/1:18,1:19:33.24:200,33,0	0/0:26,0:26:72.22:0,72,912	0/0:17,0:17:51.10:0,51,617	1/1:19,2:21:22.98:211,23,0	1/1:15,1:16:36.53:274,37,0	1/1:6,1:7:13.83:87,14,0	1/1:8,1:9:17.82:157,18,0	1/1:10,2:12:12.52:133,13,0	1/1:10,1:10:9.78:116,10,0	1/1:19,0:19:41.15:221,41,0	1/1:14,1:15:34.89:255,35,0	1/1:21,2:22:42.59:289,43,0	1/1:22,0:21:39.03:246,39,0
chr10	75039690	.	A	ACT	12802.78	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-18.439;DP=663;FS=0.962;HRun=0;HaplotypeScore=67.4104;InbreedingCoeff=0.9846;MQ=82.00;MQ0=0;MQRankSum=-4.542;QD=51.21;ReadPosRankSum=5.654;VQSLOD=5.9955;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:31:87.30:1630,87,0	0/0:7,0:7:21.07:0,21,309	0/0:18,0:18:50.98:0,51,700	0/0:19,0:19:54.18:0,54,795	0/0:31,0:31:90.30:0,90,1322	0/0:19,0:19:54.17:0,54,776	0/0:23,0:23:66.21:0,66,953	0/0:35,0:35:99:0,102,1436	1/1:2,21:23:57.20:1068,57,0	1/1:1,22:23:66.23:1227,66,0	1/1:0,19:20:57.20:1067,57,0	1/1:0,17:18:48.16:899,48,0	1/1:0,29:29:84.29:1573,84,0	0/0:25,0:25:75.25:0,75,1105	0/0:31,0:31:90.29:0,90,1306	1/1:1,20:21:51.17:956,51,0	0/0:31,0:31:93.30:0,93,1349	0/0:14,0:14:39.13:0,39,574	0/0:30,0:30:84.27:0,84,1218	0/0:47,0:47:99:0,138,1994	0/0:21,0:21:54.17:0,54,775	1/1:1,21:22:60.21:1124,60,0	1/1:2,28:30:84.29:1573,84,0	1/1:0,6:6:18.06:337,18,0	1/1:1,26:27:72.25:1349,72,0	0/0:20,1:21:6.98:0,7,808	0/0:35,0:35:93.30:0,93,1349	0/0:6,0:6:18.06:0,18,265
chr10	75041975	.	CAACAA	C	18147.44	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=14.792;DP=638;FS=0.321;HRun=0;HaplotypeScore=129.1144;InbreedingCoeff=0.9987;MQ=59.50;MQ0=5;MQRankSum=-5.784;QD=45.71;ReadPosRankSum=3.444;VQSLOD=5.1855;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:30:72.15:1419,72,0	0/0:9,0:9:24.08:0,24,609	0/0:13,0:11:24.01:0,24,427	0/0:19,0:18:26.70:0,27,406	0/0:31,0:31:84.25:0,84,2309	0/0:25,0:25:72.23:0,72,2001	0/0:12,0:12:33:0,33,743	0/0:30,0:30:78.22:0,78,1815	1/1:1,21:23:45.61:931,46,0	1/1:1,32:34:93.15:1772,93,0	1/1:2,32:34:80.97:1425,81,0	1/1:0,16:16:39.13:819,39,0	1/1:0,23:23:51.18:1087,51,0	0/0:20,0:20:60.16:0,60,1506	0/0:33,0:33:96.31:0,96,2745	1/1:0,33:33:78.26:1635,78,0	0/0:32,0:33:90.26:0,90,2469	0/0:16,0:16:45.13:0,45,1134	1/1:1,15:16:48.13:850,48,0	1/1:1,26:28:74.95:1296,75,0	1/1:2,17:18:33.07:616,33,0	1/1:1,13:14:36.03:641,36,0	1/1:0,17:17:33.06:663,33,0	1/1:1,14:15:24:470,24,0	1/1:1,13:14:27.09:574,27,0	1/1:1,37:37:99:2154,108,0	1/1:2,22:24:42.14:892,42,0	1/1:0,17:17:42.14:905,42,0
chr10	75042633	.	AC	A	5236.61	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.002;DP=511;FS=5.954;HRun=1;HaplotypeScore=47.8880;InbreedingCoeff=0.9534;MQ=72.17;MQ0=0;MQRankSum=0.059;QD=39.08;ReadPosRankSum=1.917;VQSLOD=5.2701;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.14:0,54,761	0/0:9,0:9:27.05:0,27,380	0/0:8,0:8:20.96:0,21,244	0/0:8,0:8:5.28:0,5,126	0/0:22,0:22:66.22:0,66,999	0/0:17,0:17:51.13:0,51,741	0/0:12,0:12:36.11:0,36,526	0/0:26,0:26:78.23:0,78,1129	0/0:18,0:18:54.18:0,54,816	0/0:34,0:34:99:0,102,1489	0/0:23,0:23:69.23:0,69,1017	0/0:19,0:19:57.12:0,57,798	0/0:16,0:16:48.11:0,48,705	0/0:15,0:15:45.07:0,45,651	0/0:19,0:19:57.19:0,57,871	0/0:18,0:18:54.09:0,54,726	0/0:17,0:17:51.07:0,51,676	0/0:20,0:20:60.14:0,60,867	1/1:0,20:20:60.19:821,60,0	1/1:0,23:23:69.14:916,69,0	1/1:0,13:13:39.13:544,39,0	0/0:15,0:15:45.15:0,45,682	0/0:22,0:22:66.18:0,66,950	0/0:11,0:11:33.11:0,33,499	0/0:10,0:10:30.10:0,30,459	1/1:0,37:37:99:1532,111,0	1/1:0,39:39:96.32:1340,96,0	1/1:0,2:2:6.02:84,6,0
chr10	75043136	.	G	GT	10888.98	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-14.930;DP=688;FS=6.511;HRun=1;HaplotypeScore=62.3235;InbreedingCoeff=0.9995;MQ=86.63;MQ0=0;MQRankSum=-2.824;QD=40.03;ReadPosRankSum=3.595;VQSLOD=5.4917;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:72.24:1079,72,0	0/0:8,0:8:24.06:0,24,294	0/0:28,0:28:75.20:0,75,935	0/0:17,0:17:45.14:0,45,568	0/0:30,0:30:81.26:0,81,1049	0/0:29,0:29:84.27:0,84,1091	0/0:29,0:29:87.27:0,87,1115	0/0:38,0:38:99:0,111,1430	1/1:1,31:32:87.29:1304,87,0	1/1:0,34:34:99:1443,99,0	1/1:0,25:25:72.13:1026,72,0	1/1:2,27:29:78.26:1163,78,0	1/1:0,16:16:45.15:674,45,0	0/0:28,0:28:84.26:0,84,1074	0/0:35,0:35:96.28:0,96,1206	1/1:2,21:23:57.19:854,57,0	0/0:14,0:14:42.14:0,42,545	0/0:9,0:9:27.05:0,27,331	0/0:22,0:21:51.17:0,51,661	0/0:21,0:21:60.18:0,60,764	0/0:36,0:36:99:0,105,1346	1/1:0,17:17:42.10:604,42,0	1/1:0,22:22:57.19:854,57,0	1/1:1,18:19:51.17:764,51,0	1/1:1,25:26:75.25:1122,75,0	0/0:29,1:30:42.29:0,42,1021	0/0:24,0:24:72.23:0,72,934	0/0:18,0:18:54.18:0,54,701
chr10	75043317	.	A	ATGTG	22980.14	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-6.933;DP=703;FS=0.337;HRun=0;HaplotypeScore=112.1701;InbreedingCoeff=0.9804;MQ=67.03;MQ0=1;MQRankSum=-2.840;QD=49.42;ReadPosRankSum=4.372;VQSLOD=5.2660;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:32.76:870,33,0	0/0:12,0:12:36.11:0,36,632	0/0:17,0:13:27.51:0,28,358	0/0:14,0:11:5.33:0,5,118	0/0:35,0:35:99:0,102,1664	0/0:27,0:27:72.22:0,72,1263	0/0:20,0:20:57.04:0,57,875	0/0:28,0:28:66.19:0,66,1095	1/1:0,27:28:66.23:1693,66,0	1/1:1,22:25:66.18:1467,66,0	1/1:1,26:28:45.15:1170,45,0	1/1:1,32:34:69.23:1820,69,0	1/1:2,24:26:36.12:951,36,0	0/0:24,0:24:63.17:0,63,1061	0/0:34,0:34:93.27:0,93,1584	1/1:5,23:29:60.21:1554,60,0	0/0:18,0:18:48.04:0,48,750	0/0:6,0:6:15.03:0,15,245	1/1:9,22:31:78.15:1525,78,0	1/1:1,27:28:63.22:1636,63,0	1/1:4,32:40:57.14:1444,57,0	1/1:0,21:22:42.14:1092,42,0	1/1:3,23:26:54.08:1383,54,0	1/1:2,15:17:33.11:871,33,0	1/1:4,25:31:57.20:1457,57,0	1/1:4,25:30:78.12:1673,78,0	1/1:5,20:24:53.76:1345,54,0	1/1:4,18:22:42.14:1029,42,0
chr10	75044844	.	G	GT	1585.41	PASS	AB=0.722;AC=10;AF=0.179;AN=56;BaseQRankSum=-3.778;DP=625;FS=4.858;HRun=11;HaplotypeScore=67.2200;InbreedingCoeff=0.6388;MQ=65.77;MQ0=10;MQRankSum=0.222;QD=12.29;ReadPosRankSum=-1.032;VQSLOD=3.2589;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:37.74:0,38,465	0/0:7,0:7:14.92:0,15,116	0/1:16,0:10:12.30:12,0,63	0/0:10,0:10:15.06:0,15,80	0/0:25,2:26:13.56:0,14,369	0/0:32,0:32:78.15:0,78,601	0/0:18,0:17:22.22:0,22,282	0/0:32,0:31:27:0,27,311	0/0:15,0:15:28.57:0,29,235	0/0:28,1:29:25.67:0,26,371	0/0:22,1:24:25.18:0,25,361	0/0:16,0:16:40.19:0,40,305	0/0:24,0:24:28.54:0,29,370	0/0:21,1:22:27.45:0,27,386	0/0:30,0:30:74.62:0,75,571	0/0:20,0:20:44.80:0,45,346	0/0:36,0:35:65.32:0,65,687	0/0:28,0:29:58.89:0,59,441	1/1:4,17:20:47.50:430,47,0	1/1:8,12:21:32.83:302,33,0	0/1:6,7:12:0.94:164,0,1	0/0:17,0:17:37.86:0,38,282	0/0:28,1:29:30.08:0,30,408	0/0:26,0:27:67.73:0,68,513	0/0:18,0:18:35.81:0,36,278	0/1:12,14:26:1.23:316,0,1	1/1:0,14:15:38.87:370,39,0	0/1:5,11:17:19.73:153,0,20
chr10	75045220	.	AATC	A	6025.70	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.666;DP=578;FS=12.900;HRun=0;HaplotypeScore=86.4058;InbreedingCoeff=0.9984;MQ=75.94;MQ0=0;MQRankSum=-1.355;QD=42.43;ReadPosRankSum=4.348;VQSLOD=5.5299;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:18:45.15:723,45,0	0/0:10,0:10:27.09:0,27,596	0/0:17,0:16:34.43:0,34,695	0/0:10,0:9:24.07:0,24,456	0/0:24,0:24:63.20:0,63,1327	0/0:17,0:17:51.18:0,51,1124	0/0:26,0:26:72.23:0,72,1522	0/0:27,0:27:75.26:0,75,1641	1/1:0,13:13:36.12:579,36,0	0/0:25,0:25:72.25:0,72,1568	0/0:25,0:25:69.24:0,69,1506	1/1:0,22:22:57.19:916,57,0	1/1:0,21:21:63.21:1012,63,0	0/0:18,0:18:54.19:0,54,1192	0/0:24,0:24:69.22:0,69,1465	0/0:26,0:26:75.24:0,75,1607	0/0:41,0:41:99:0,114,2467	0/0:16,0:16:45.15:0,45,965	0/0:13,0:13:39.13:0,39,861	0/0:27,0:27:81.28:0,81,1737	0/0:10,0:10:27.09:0,27,596	1/1:1,25:26:66.23:1061,66,0	1/1:1,33:34:87.30:1398,87,0	1/1:0,8:8:21.07:338,21,0	0/0:19,0:19:57.20:0,57,1259	0/0:24,0:24:63.22:0,63,1379	0/0:20,0:20:60.21:0,60,1322	0/0:17,0:17:48.12:0,48,934
chr10	75046679	.	GA	G	4393.58	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=9.552;DP=517;FS=1.167;HRun=8;HaplotypeScore=55.9073;InbreedingCoeff=0.9986;MQ=79.27;MQ0=0;MQRankSum=0.844;QD=24.55;ReadPosRankSum=5.428;VQSLOD=5.1279;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:39.06:376,39,0	0/0:7,0:7:21.05:0,21,244	0/0:16,0:16:45.11:0,45,523	0/0:10,0:10:27.08:0,27,321	0/0:24,0:24:69.21:0,69,833	0/0:22,0:22:57.17:0,57,688	0/0:24,0:23:63.18:0,63,750	0/0:33,0:33:87.26:0,87,1041	1/1:0,17:17:48.08:464,48,0	1/1:2,18:20:54.07:517,54,0	1/1:3,12:15:33.05:318,33,0	1/1:2,21:23:60.10:579,60,0	1/1:2,18:20:44.63:434,45,0	0/0:21,0:21:57.17:0,57,688	0/0:29,0:29:87.26:0,87,1041	1/1:2,20:22:58.20:576,58,0	0/0:26,0:26:72.20:0,72,848	0/0:13,0:13:35.60:0,36,408	0/0:18,0:18:51.09:0,51,587	0/0:15,0:15:36.11:0,36,435	0/0:16,0:16:42.12:0,42,497	1/1:1,10:11:30.05:290,30,0	1/1:1,9:10:24.04:232,24,0	1/1:2,10:12:30.04:290,30,0	1/1:3,11:14:33.05:319,33,0	0/0:19,0:19:51.16:0,51,616	0/0:35,0:35:93.29:0,93,1123	0/0:10,0:10:29.95:0,30,327
chr10	75046884	.	CTCT	C	4176.47	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.094;DP=415;FS=0.459;HRun=0;HaplotypeScore=58.7470;InbreedingCoeff=0.9739;MQ=70.78;MQ0=1;MQRankSum=-4.124;QD=48.01;ReadPosRankSum=0.298;VQSLOD=5.3447;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.25:0,72,1701	0/0:7,0:7:21.07:0,21,497	0/0:9,0:9:27.09:0,27,575	0/0:7,0:7:15.19:0,15,185	0/0:20,0:20:60.19:0,60,1371	0/0:11,0:11:33.10:0,33,720	0/0:15,0:15:45.15:0,45,1063	0/0:20,0:20:60.20:0,60,1375	0/0:17,0:17:48.16:0,48,1134	0/0:23,0:23:69.23:0,69,1533	0/0:13,0:13:39.12:0,39,876	0/0:14,0:14:39.13:0,39,913	0/0:17,0:17:42.11:0,42,939	0/0:14,0:14:42.14:0,42,992	0/0:22,0:22:66.23:0,66,1545	0/0:25,0:25:72.23:0,72,1605	0/0:18,0:18:47.70:0,48,1134	0/0:18,0:17:48.16:0,48,1134	1/1:0,17:17:51.15:836,51,0	1/1:0,12:12:36.12:635,36,0	1/1:0,5:5:12:179,12,0	0/0:5,0:5:15.04:0,15,307	0/0:10,0:10:30.09:0,30,663	0/0:10,0:10:30.10:0,30,680	0/0:9,0:9:27.09:0,27,639	1/1:0,21:21:63.21:1079,63,0	1/1:0,28:28:75.21:1289,75,0	1/1:0,4:4:9.03:159,9,0
chr10	75047076	.	CT	C	4290.57	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.243;DP=390;FS=9.546;HRun=1;HaplotypeScore=37.3211;InbreedingCoeff=0.9711;MQ=79.52;MQ0=0;MQRankSum=-1.505;QD=36.67;ReadPosRankSum=2.485;VQSLOD=4.0643;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.20:0,60,955	0/0:7,0:7:21.07:0,21,336	0/0:7,0:7:21.07:0,21,337	0/0:14,0:13:19.12:0,19,398	0/0:18,0:18:54.18:0,54,854	0/0:5,0:5:15.05:0,15,240	0/0:9,0:9:27.09:0,27,432	0/0:29,0:29:87.28:0,87,1348	0/0:9,0:9:27.09:0,27,431	0/0:14,0:14:42.14:0,42,670	0/0:18,0:18:48.16:0,48,766	0/0:10,0:10:30.10:0,30,467	0/0:11,0:11:33.11:0,33,527	0/0:12,0:12:36.12:0,36,575	0/0:7,0:7:21.07:0,21,336	0/0:12,0:12:36.12:0,36,575	0/0:24,0:24:72.23:0,72,1124	0/0:15,0:14:42.14:0,42,671	1/1:0,18:17:48.16:656,48,0	1/1:0,14:14:39.13:542,39,0	1/1:0,21:21:57.19:795,57,0	0/0:2,0:2:6.02:0,6,96	0/0:11,0:11:30.10:0,30,475	0/0:8,0:8:24.06:0,24,360	0/0:11,0:11:33.11:0,33,526	1/1:0,20:19:54.18:750,54,0	1/1:0,19:19:51.17:711,51,0	1/1:0,25:25:60.20:836,60,0
chr10	75048811	.	G	GAGTAA	17249.15	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.139;DP=596;FS=14.124;HRun=0;HaplotypeScore=117.2928;InbreedingCoeff=0.9994;MQ=85.61;MQ0=1;MQRankSum=-18.460;QD=86.68;ReadPosRankSum=0.935;VQSLOD=6.4656;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:42.06:1233,42,0	0/0:13,0:13:39.13:0,39,897	0/0:25,0:25:66.23:0,66,1475	0/0:21,0:21:56.50:0,57,1121	0/0:33,0:33:99:0,99,2307	0/0:30,0:30:90.28:0,90,1976	0/0:16,0:16:48.16:0,48,1113	0/0:38,0:38:99:0,114,2492	1/1:1,12:14:39.13:1246,39,0	1/1:1,23:26:75.26:2442,75,0	1/1:2,15:17:48.16:1551,48,0	1/1:1,16:18:51.18:1649,51,0	1/1:1,14:18:48.16:1528,48,0	0/0:19,0:19:57.18:0,57,1283	0/0:20,0:20:57.20:0,57,1328	1/1:4,15:21:51.16:1532,51,0	0/0:17,0:17:48.16:0,48,1119	0/0:21,0:21:57.16:0,57,1276	0/0:28,0:28:84.26:0,84,1863	0/0:24,0:24:72.22:0,72,1528	0/0:22,0:22:66.21:0,66,1465	1/1:2,13:17:42.14:1354,42,0	1/1:1,16:17:48.16:1589,48,0	1/1:1,8:10:24.08:758,24,0	1/1:0,24:25:72.25:2368,72,0	0/0:33,0:33:70.44:0,70,2141	0/0:29,0:29:81.26:0,81,1831	0/0:8,0:8:24.08:0,24,559
chr10	75049391	.	AAAAG	A	3547.16	PASS	AB=0.608;AC=10;AF=0.179;AN=56;BaseQRankSum=11.122;DP=571;FS=7.371;HRun=0;HaplotypeScore=97.2972;InbreedingCoeff=0.7687;MQ=56.12;MQ0=17;MQRankSum=-5.593;QD=31.12;ReadPosRankSum=-2.127;VQSLOD=2.7415;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,2107	0/0:13,0:13:39.08:0,39,821	0/0:14,0:5:14.97:0,15,317	0/0:12,0:5:9.02:0,9,93	0/0:26,0:26:78.19:0,78,1658	0/0:22,0:22:66.18:0,66,1469	0/0:18,0:16:45.15:0,45,1088	0/0:30,0:27:69.13:0,69,1372	0/0:13,0:13:33.09:0,33,774	0/0:18,0:18:42.09:0,42,848	0/0:25,0:25:66.12:0,66,1259	0/0:22,0:22:63.14:0,63,1247	0/0:25,0:25:69.14:0,69,1350	0/0:22,0:22:63.17:0,63,1279	0/0:20,0:19:57.14:0,57,1174	0/0:14,0:14:42.11:0,42,889	0/0:21,0:21:54.15:0,54,1154	0/0:22,0:22:49.68:0,50,1105	1/1:10,6:14:30.51:384,31,0	1/1:4,19:23:44.99:618,45,0	0/1:4,4:6:6.60:64,0,7	0/0:19,0:18:45.10:0,45,915	0/0:15,0:14:39.13:0,39,910	0/0:18,0:18:54.17:0,54,1273	0/0:29,0:29:82.50:0,83,1788	0/1:4,18:22:17.78:790,0,18	1/1:11,21:30:85.26:1165,85,0	1/1:0,13:13:30.10:526,30,0
chr10	75051035	.	A	AT	6103.93	PASS	AB=0.792;AC=34;AF=0.607;AN=56;BaseQRankSum=-1.312;DP=509;FS=3.345;HRun=10;HaplotypeScore=56.2376;InbreedingCoeff=0.7985;MQ=68.98;MQ0=1;MQRankSum=-0.523;QD=18.06;ReadPosRankSum=1.441;VQSLOD=5.6180;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,1:23:40.13:223,40,0	0/0:11,0:11:29.96:0,30,246	0/1:10,1:9:17.06:17,0,78	0/0:6,0:6:2.95:0,3,19	0/0:34,0:34:77.87:0,78,637	0/0:21,0:21:56.93:0,57,468	0/0:5,0:5:14.98:0,15,123	0/0:23,0:23:56.92:0,57,466	1/1:1,0:21:51.27:257,51,0	1/1:9,23:33:31.91:742,32,0	1/1:0,20:20:57.10:595,57,0	1/1:2,0:17:39.81:199,40,0	1/1:5,0:19:34.24:174,34,0	0/0:11,0:11:29.96:0,30,246	0/0:22,0:22:56.90:0,57,465	1/1:2,15:17:39.10:416,39,0	0/0:23,0:23:44.91:0,45,367	0/0:14,0:15:34.99:0,35,277	1/1:4,12:16:15.35:359,15,0	1/1:5,28:33:56.57:807,57,0	0/1:5,5:10:49.87:136,0,50	1/1:0,0:12:34.32:177,34,0	1/1:6,0:17:25.79:137,26,0	1/1:4,0:7:3.31:15,3,0	1/1:5,15:20:30.08:320,30,0	1/1:5,18:23:48.10:503,48,0	1/1:2,18:20:57.12:596,57,0	1/1:0,16:17:41.94:430,42,0
chr10	75052877	.	A	AT	1098.25	PASS	AB=0.822;AC=21;AF=0.375;AN=56;BaseQRankSum=-3.787;DP=561;FS=1.718;HRun=16;HaplotypeScore=81.1311;InbreedingCoeff=0.3270;MQ=71.18;MQ0=5;MQRankSum=-0.219;QD=3.62;ReadPosRankSum=-1.688;VQSLOD=0.3782;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:10,12:24:7.75:101,0,8	0/0:5,0:5:14.38:0,14,78	0/1:22,0:12:5.76:19,0,6	0/1:20,0:16:13.85:14,0,42	0/1:20,3:26:9.15:9,0,129	0/0:14,1:18:8.36:0,8,126	0/0:13,0:15:21.49:0,21,112	0/0:30,1:31:24.93:0,25,224	1/1:9,13:24:26.13:245,26,0	1/1:18,10:28:18.77:144,19,0	0/1:13,7:21:33.64:45,0,34	0/1:11,5:16:10.77:97,0,11	1/1:8,11:19:5.42:66,5,0	0/1:15,0:15:9.40:9,0,26	0/0:17,0:18:36.92:0,37,204	1/1:7,10:17:12.86:98,13,0	0/0:29,10:41:4.39:0,4,192	0/0:7,0:7:13.67:0,14,72	0/0:14,0:29:40.06:0,40,139	0/0:8,0:22:26.27:0,26,75	0/0:2,0:12:12.17:0,12,34	1/1:2,8:10:10.61:62,11,0	1/1:12,11:23:13.47:186,13,0	0/1:6,12:19:1.89:71,0,2	0/1:14,5:19:22.87:117,0,23	0/0:10,0:28:37.19:0,37,115	0/0:9,0:22:19.74:0,20,73	0/0:2,0:6:10.18:0,10,29
chr10	75053787	.	AAT	A	2828.23	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=13.720;DP=508;FS=0.743;HRun=0;HaplotypeScore=91.1544;InbreedingCoeff=0.2590;MQ=70.79;MQ0=10;MQRankSum=-1.106;QD=11.18;ReadPosRankSum=3.993;VQSLOD=3.5103;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:42.96:43,0,100	0/0:8,0:8:24.07:0,24,371	0/0:33,0:12:34.61:0,35,268	0/0:24,0:12:4.47:0,4,116	0/0:26,0:26:57.17:0,57,952	0/0:22,0:22:66.10:0,66,1008	0/0:18,0:18:54.08:0,54,743	0/0:39,0:39:99:0,112,1277	0/1:17,0:17:42.39:58,0,42	0/1:18,0:18:23.84:70,0,24	0/1:12,0:12:36.09:66,0,36	1/1:16,0:16:1.98:57,2,0	0/1:5,0:5:7.08:7,0,18	0/0:13,0:13:39.05:0,39,517	0/0:14,0:14:42.08:0,42,611	0/0:10,0:10:4.36:0,4,77	0/0:32,0:32:89.05:0,89,1292	0/0:15,0:15:45.10:0,45,704	1/1:2,21:23:50.47:619,50,0	1/1:3,18:21:52.48:523,52,0	1/1:1,8:9:8.03:157,8,0	0/1:14,0:14:10.77:34,0,11	0/1:11,0:11:22.63:50,0,23	0/1:23,0:23:65.22:76,0,65	0/1:12,0:12:40.71:41,0,117	1/1:1,23:24:69.08:658,69,0	1/1:1,19:20:19.85:476,20,0	1/1:0,3:3:6.02:81,6,0
chr10	75053788	.	ATT	A	3594.23	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=11.422;DP=504;FS=7.239;HRun=12;HaplotypeScore=89.4939;InbreedingCoeff=0.8328;MQ=70.01;MQ0=10;MQRankSum=-1.856;QD=13.77;ReadPosRankSum=4.647;VQSLOD=2.2463;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,18:25:29.56:357,30,0	0/0:8,0:8:21.07:0,21,310	0/0:33,0:12:20.20:0,20,184	0/0:24,0:11:7.39:0,7,167	0/0:25,0:26:63.42:0,63,806	0/0:22,0:22:57.15:0,57,792	0/0:18,0:18:39.10:0,39,554	0/0:34,0:39:85.42:0,85,1049	1/1:2,14:16:33.07:334,33,0	1/1:2,15:18:44.87:431,45,0	1/1:6,6:12:23.21:212,23,0	1/1:1,14:16:33.02:322,33,0	1/1:1,4:5:6.01:61,6,0	0/0:12,0:13:36.10:0,36,495	0/0:13,0:13:36.10:0,36,511	1/1:4,5:9:9:92,9,0	0/0:30,0:32:86.09:0,86,1213	0/0:15,0:15:42.14:0,42,614	0/1:23,0:23:33.29:119,0,33	1/1:21,0:21:18.73:127,19,0	1/1:9,0:9:11.34:55,11,0	1/1:4,10:14:29.02:342,29,0	1/1:3,8:11:24.01:242,24,0	1/1:5,18:23:39.04:397,39,0	1/1:7,5:12:17.89:170,18,0	1/1:23,1:24:9.25:146,9,0	1/1:20,0:20:2.08:159,2,0	1/1:3,0:3:5.77:30,6,0
chr10	75053925	.	GA	G	4955.54	PASS	AB=0.857;AC=23;AF=0.411;AN=56;BaseQRankSum=10.746;DP=619;FS=14.347;HRun=10;HaplotypeScore=70.7048;InbreedingCoeff=0.8778;MQ=80.60;MQ0=0;MQRankSum=0.525;QD=18.29;ReadPosRankSum=6.261;VQSLOD=4.0914;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,43:47:99:1048,122,0	0/0:6,0:6:15.04:0,15,166	0/1:20,2:22:21.03:21,0,223	0/0:20,0:16:2.88:0,3,228	0/0:19,1:21:27.91:0,28,504	0/0:27,1:28:43.13:0,43,697	0/0:31,0:31:84.17:0,84,900	0/0:32,2:34:34.99:0,35,806	1/1:2,12:14:32.98:286,33,0	1/1:5,24:29:62.92:541,63,0	1/1:1,8:9:20.98:182,21,0	1/1:6,19:26:38.46:458,38,0	1/1:3,16:19:8.81:306,9,0	0/0:17,0:17:48.08:0,48,504	0/0:20,1:21:28.07:0,28,522	1/1:2,15:17:41.99:365,42,0	0/0:33,0:34:93.06:0,93,993	0/0:18,0:18:48.08:0,48,504	0/0:20,0:20:48.29:0,48,580	0/0:25,2:28:8.05:0,8,524	0/0:14,0:14:30.08:0,30,332	1/1:0,10:10:26.97:232,27,0	1/1:1,13:14:14.63:288,15,0	1/1:7,34:41:68.75:826,69,0	1/1:1,18:21:49.05:403,49,0	0/0:15,0:15:33.08:0,33,359	0/0:26,0:27:78.03:0,78,836	0/0:14,0:14:36.08:0,36,388
chr10	75054644	.	G	GT	5575.97	PASS	AB=0.776;AC=22;AF=0.393;AN=56;BaseQRankSum=-10.781;DP=728;FS=3.244;HRun=11;HaplotypeScore=83.1858;InbreedingCoeff=0.7379;MQ=76.34;MQ0=3;MQRankSum=0.568;QD=15.53;ReadPosRankSum=1.781;VQSLOD=5.6820;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,35:42:69.78:874,70,0	0/0:13,0:13:29.86:0,30,232	0/1:43,1:24:8.33:8,0,71	0/1:43,1:31:9.19:9,0,81	0/0:37,0:38:72.82:0,73,678	0/0:15,0:16:34.89:0,35,260	0/0:16,0:18:45.90:0,46,334	0/0:22,1:23:12.22:0,12,272	1/1:4,11:15:33.06:331,33,0	1/1:4,30:34:93.17:935,93,0	1/1:4,15:19:21.87:403,22,0	1/1:5,21:26:33.88:524,34,0	1/1:3,16:19:42.08:426,42,0	0/0:20,0:22:57.84:0,58,430	0/0:33,0:34:85.64:0,86,647	1/1:4,13:20:28.92:420,29,0	0/0:36,0:36:83.63:0,84,650	0/0:15,1:16:11.37:0,11,268	0/0:25,1:28:60.82:0,61,453	0/0:29,0:29:74.63:0,75,573	0/0:12,0:13:34.90:0,35,259	0/1:5,13:19:4.40:319,0,4	1/1:4,20:24:10.75:471,11,0	1/1:4,18:22:21.86:403,22,0	0/1:8,22:31:5.97:452,0,6	0/0:31,1:33:58.16:0,58,615	0/0:37,1:38:71.16:0,71,736	0/0:12,0:12:29.88:0,30,232
chr10	75055206	.	AAAG	A	11142.53	PASS	AB=0.990;AC=37;AF=0.661;AN=56;BaseQRankSum=-11.642;DP=666;FS=4.437;HRun=0;HaplotypeScore=167.0424;InbreedingCoeff=-0.0890;MQ=67.88;MQ0=11;MQRankSum=-4.446;QD=18.89;ReadPosRankSum=0.581;VQSLOD=4.4187;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:51.13:803,51,0	0/1:9,0:9:0.51:1,0,39	0/1:41,0:22:21.28:21,0,288	0/0:44,0:27:32.49:0,32,354	0/1:27,1:28:78.57:79,0,119	0/1:31,0:31:60.11:60,0,121	0/1:21,0:21:2.21:2,0,89	0/1:21,0:19:65.58:127,0,66	1/1:6,24:30:75.25:1191,75,0	1/1:2,24:25:69.23:1103,69,0	1/1:3,17:20:48.16:783,48,0	1/1:2,10:12:33.08:500,33,0	1/1:4,18:22:57.19:920,57,0	0/0:32,0:32:63.90:0,64,244	0/1:26,1:25:99:139,0,117	1/1:3,29:32:93.32:1495,93,0	0/1:22,0:22:63.10:63,0,107	0/1:17,0:17:40.31:40,0,76	0/1:17,0:14:17.15:17,0,45	0/1:20,0:20:35.87:36,0,85	0/1:25,0:25:33.81:34,0,119	1/1:3,21:23:63.22:1028,63,0	1/1:8,15:23:42.11:686,42,0	1/1:2,25:26:66.23:1077,66,0	1/1:5,16:21:45.15:735,45,0	0/1:23,0:23:13.92:14,0,112	0/1:21,2:23:79.24:178,0,79	0/1:4,0:4:10.50:10,0,18
chr10	75055209	.	GA	G	13247.73	PASS	AB=0.935;AC=54;AF=0.964;AN=56;BaseQRankSum=-4.047;DP=672;FS=0.000;HRun=3;HaplotypeScore=139.7442;InbreedingCoeff=-0.0427;MQ=66.13;MQ0=11;MQRankSum=-1.354;QD=19.71;ReadPosRankSum=6.737;VQSLOD=4.1389;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,2:27:30.29:190,30,0	1/1:1,8:9:21.07:272,21,0	0/1:37,5:23:94.66:95,0,278	0/1:42,1:26:44.46:44,0,271	1/1:2,27:29:72.02:906,72,0	1/1:3,29:32:72.23:932,72,0	1/1:2,19:21:48.14:617,48,0	1/1:2,20:20:54.17:698,54,0	1/1:28,4:32:71.76:347,72,0	1/1:28,0:27:46.68:288,47,0	1/1:17,3:20:45.18:234,45,0	1/1:11,1:12:30.01:156,30,0	1/1:20,2:22:53.57:276,54,0	1/1:3,30:33:81.26:1052,81,0	1/1:3,24:25:72.02:905,72,0	1/1:31,2:33:87.82:487,88,0	1/1:0,22:22:60.19:776,60,0	1/1:0,16:16:42.14:544,42,0	1/1:2,12:11:27.04:330,27,0	1/1:2,18:20:51.16:652,51,0	1/1:0,25:25:68.78:886,69,0	1/1:23,1:22:59.17:297,59,0	1/1:19,5:24:5.43:137,5,0	1/1:25,1:25:44.70:257,45,0	1/1:17,4:21:41.97:189,42,0	1/1:0,21:21:60.18:763,60,0	1/1:3,20:23:62.97:762,63,0	1/1:0,4:4:12.04:156,12,0
chr10	75055274	.	A	AACACACACACACAC	15641.44	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=5.721;DP=719;FS=6.265;HRun=0;HaplotypeScore=307.6397;InbreedingCoeff=0.7786;MQ=56.34;MQ0=1;MQRankSum=-12.181;QD=34.91;ReadPosRankSum=-4.586;VQSLOD=2.4419;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:2.98:23,3,0	0/0:8,0:8:24.08:0,24,876	0/1:26,0:18:38.42:38,0,309	0/0:24,0:20:20.62:0,21,296	0/0:35,0:37:96.30:0,96,3476	0/0:34,0:36:87.28:0,87,3007	0/0:26,0:27:60.21:0,60,2197	0/0:27,0:27:51.16:0,51,1823	1/1:26,0:26:6.02:220,6,0	1/1:34,5:39:66.18:3337,66,0	1/1:15,3:19:18.05:869,18,0	1/1:18,0:18:5.99:249,6,0	1/1:21,0:21:12.04:668,12,0	0/0:34,0:34:75.21:0,75,2775	0/0:30,0:29:72.23:0,72,2701	1/1:26,6:34:22:1159,22,0	0/0:30,0:31:78.25:0,78,2951	0/0:14,0:16:3.42:0,3,1313	1/1:19,0:18:27.09:1171,27,0	1/1:30,0:30:18.01:1020,18,0	1/1:20,0:19:12:418,12,0	1/1:22,0:21:6.01:93,6,0	1/1:30,0:30:5.77:277,6,0	1/1:23,0:24:5.20:225,5,0	1/1:16,2:18:27.08:1429,27,0	1/1:31,0:31:39.10:1748,39,0	1/1:29,0:29:36.12:2143,36,0	1/1:6,0:6:9.03:555,9,0
chr10	75055293	.	A	ACACACACACACACACT	21879.61	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=5.655;DP=724;FS=15.411;HRun=0;HaplotypeScore=329.7925;InbreedingCoeff=0.2200;MQ=54.75;MQ0=2;MQRankSum=-13.879;QD=46.55;ReadPosRankSum=0.548;VQSLOD=2.7982;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:39:99:348,0,178	0/0:10,0:10:30.07:0,30,1069	0/1:22,0:15:12.93:13,0,543	0/0:25,0:19:40.38:0,40,542	0/0:38,0:38:99:0,105,4163	0/0:37,0:37:99:0,99,3662	0/1:31,0:31:14.03:14,0,2640	0/0:31,0:31:90.21:0,90,2556	0/1:26,0:25:99:892,0,138	0/1:39,0:38:99:3027,0,218	0/1:15,0:15:1.93:792,0,2	0/1:21,0:21:75.61:558,0,76	0/1:18,0:18:12.79:1203,0,13	0/0:28,0:28:78.20:0,78,3320	0/0:30,0:29:87.19:0,87,3392	1/1:28,0:28:3.11:1147,3,0	0/0:37,0:37:99:0,105,3702	0/0:18,0:18:26.80:0,27,1649	1/1:18,1:20:57.07:1920,57,0	1/1:27,3:31:19.05:1397,19,0	1/1:23,1:24:15.90:1119,16,0	0/1:21,0:20:93.56:358,0,94	1/1:28,0:27:14.79:837,15,0	0/1:24,0:24:96.51:361,0,97	0/1:16,0:16:56.64:483,0,57	1/1:28,4:32:87.02:3195,87,0	1/1:18,8:26:60.04:3082,60,0	1/1:3,5:8:15.05:1132,15,0
chr10	75055766	.	G	GTT	4198.41	PASS	AB=0.577;AC=21;AF=0.375;AN=56;BaseQRankSum=9.123;DP=623;FS=1.507;HRun=8;HaplotypeScore=111.1535;InbreedingCoeff=0.9398;MQ=74.16;MQ0=1;MQRankSum=0.470;QD=18.33;ReadPosRankSum=0.645;VQSLOD=1.8919;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,1:24:39.53:186,40,0	0/0:11,0:11:27.07:0,27,301	0/0:27,0:19:27.78:0,28,270	0/0:41,0:28:49.60:0,50,445	0/0:26,0:26:72.19:0,72,802	0/0:21,0:21:57.14:0,57,635	0/0:13,0:14:30.01:0,30,393	0/0:26,0:26:63.09:0,63,673	0/1:4,0:14:5.46:58,0,5	1/1:2,25:28:78.27:1227,78,0	1/1:5,21:27:63.17:952,63,0	1/1:2,0:22:42.15:144,42,0	1/1:1,0:15:30.19:106,30,0	0/0:23,0:23:66.15:0,66,725	0/0:29,0:29:81.19:0,81,892	1/1:1,11:14:29.17:399,29,0	0/0:25,0:25:63.14:0,63,702	0/0:10,0:10:28.30:0,28,291	0/0:19,0:18:33.55:0,34,368	0/0:29,0:29:84.10:0,84,908	0/0:16,0:16:39.10:0,39,435	1/1:1,1:20:45.43:194,45,0	1/1:3,0:30:50.38:173,50,0	1/1:1,0:10:22.46:77,22,0	1/1:3,20:24:47.13:683,47,0	0/0:22,0:22:54.60:0,55,602	0/0:36,0:36:93.16:0,93,1004	0/0:17,0:17:48.13:0,48,535
chr10	75056497	.	GA	G	805.98	PASS	AB=0.733;AC=30;AF=0.556;AN=54;BaseQRankSum=9.582;DP=409;FS=0.514;HRun=14;HaplotypeScore=67.8349;InbreedingCoeff=0.6072;MQ=48.08;MQ0=21;MQRankSum=-6.257;QD=3.70;ReadPosRankSum=1.760;VQSLOD=0.3510;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:12:12.20:35,12,0	0/0:9,0:10:14.84:0,15,122	0/0:16,0:1:2.99:0,3,23	0/0:22,0:2:3:0,3,27	0/0:16,4:19:15.52:0,16,239	0/0:17,0:16:33.84:0,34,297	0/0:21,1:21:22.27:0,22,324	0/1:17,2:17:5.21:5,0,227	1/1:11,0:14:12.32:38,12,0	1/1:8,0:15:24.07:76,24,0	1/1:5,0:11:9.95:35,10,0	1/1:5,0:7:4.11:13,4,0	0/1:4,0:5:2.93:3,0,5	0/0:15,0:15:25.41:0,25,210	0/0:22,1:23:27.41:0,27,385	1/1:5,0:6:4.51:15,5,0	0/0:29,0:27:69.05:0,69,631	0/0:14,0:12:17.09:0,17,189	0/1:10,7:14:1.61:124,0,2	1/1:4,12:17:30.74:196,31,0	1/1:14,3:14:7.98:57,8,0	1/1:0,0:1:2.04:6,2,0	./.	1/1:0,0:6:8.81:26,9,0	1/1:1,0:2:2.03:6,2,0	0/1:11,9:17:2.04:124,0,2	1/1:7,10:19:18.56:209,19,0	1/1:7,1:6:2.96:21,3,0
chr10	75056530	.	C	CAAAA	4011.40	PASS	AB=0.986;AC=28;AF=0.500;AN=56;BaseQRankSum=11.984;DP=456;FS=2.672;HRun=4;HaplotypeScore=88.5274;InbreedingCoeff=0.6594;MQ=58.87;MQ0=11;MQRankSum=-9.565;QD=18.49;ReadPosRankSum=2.377;VQSLOD=0.2562;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,11:19:38.95:701,39,0	0/0:5,0:5:12.03:0,12,181	0/0:26,0:5:12.02:0,12,143	0/0:34,0:14:11.20:0,11,326	0/0:26,0:26:78.09:0,78,1216	0/0:12,0:12:30.10:0,30,514	0/0:17,0:17:45.08:0,45,724	0/0:38,0:38:99:0,101,1488	1/1:4,8:13:15.01:291,15,0	1/1:8,14:21:51.05:857,51,0	1/1:4,5:7:17.89:233,18,0	1/1:5,13:16:18.02:344,18,0	1/1:2,7:9:12.04:290,12,0	0/0:12,0:12:36.09:0,36,541	0/0:17,0:17:45.15:0,45,760	1/1:2,11:13:12.04:200,12,0	0/0:33,0:32:93.28:0,93,1497	0/0:13,0:12:33.11:0,33,551	0/1:19,0:17:5.81:6,0,54	0/1:13,0:13:36.26:36,0,44	0/0:6,0:6:9.64:0,10,70	1/1:5,3:7:21.05:387,21,0	1/1:0,5:6:6.02:154,6,0	1/1:3,8:9:9.03:230,9,0	1/1:1,7:8:6.02:120,6,0	0/1:16,1:16:7.80:90,0,8	0/1:18,0:18:15.33:47,0,15	1/1:7,0:7:7.26:25,7,0
chr10	75056535	.	C	CAAA	6386.55	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=10.658;DP=450;FS=0.414;HRun=4;HaplotypeScore=74.3621;InbreedingCoeff=0.9441;MQ=61.40;MQ0=9;MQRankSum=-8.934;QD=28.01;ReadPosRankSum=0.839;VQSLOD=1.6435;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:39.83:502,40,0	0/0:4,0:4:12.04:0,12,183	0/0:19,0:6:18.03:0,18,246	0/0:30,0:14:35.89:0,36,454	0/0:28,0:28:81.14:0,81,1160	0/0:12,0:12:36.08:0,36,487	0/0:15,0:15:42.14:0,42,642	0/0:37,0:37:99:0,105,1494	1/1:15,0:14:14.94:205,15,0	1/1:23,0:21:40.69:407,41,0	1/1:10,0:8:17.75:157,18,0	1/1:20,0:18:24.01:295,24,0	1/1:9,0:9:12.02:156,12,0	0/0:12,0:12:36.12:0,36,549	0/0:17,0:17:48.13:0,48,706	1/1:13,0:13:11.53:178,12,0	0/0:32,0:32:90.28:0,90,1351	0/0:15,0:14:35.93:0,36,506	1/1:4,15:17:45.15:918,45,0	1/1:4,9:14:36.06:676,36,0	1/1:1,5:6:12:200,12,0	1/1:10,0:9:24.51:275,25,0	1/1:7,0:7:9.02:110,9,0	1/1:12,0:10:9.03:126,9,0	1/1:8,0:8:6.02:106,6,0	1/1:2,13:14:39.13:809,39,0	1/1:2,16:19:42.13:865,42,0	1/1:0,6:6:18.06:402,18,0
chr10	75056665	.	A	AT	1558.93	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=2.292;DP=384;FS=0.603;HRun=1;HaplotypeScore=59.5536;InbreedingCoeff=0.9052;MQ=59.90;MQ0=11;MQRankSum=1.622;QD=14.71;ReadPosRankSum=1.344;VQSLOD=3.2147;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,6:13:8.42:76,8,0	0/0:6,0:6:10.88:0,11,80	0/0:46,0:12:10.86:0,11,107	0/0:25,0:5:5.38:0,5,61	0/0:21,0:20:35.83:0,36,286	0/0:16,0:16:28.80:0,29,239	0/0:6,0:6:17.20:0,17,130	0/0:29,0:30:64.93:0,65,516	1/1:8,0:8:17.94:151,18,0	1/1:20,0:20:49.55:449,50,0	1/1:14,0:14:31.87:316,32,0	1/1:5,0:4:8.99:77,9,0	1/1:8,0:7:17.92:160,18,0	0/0:8,0:8:11.21:0,11,80	0/0:10,0:10:11.64:0,12,77	1/1:7,0:7:9.31:96,9,0	0/0:15,0:15:25.87:0,26,189	0/0:16,0:14:20.33:0,20,148	0/0:17,0:14:32.05:0,32,275	0/0:12,0:12:26.99:0,27,240	0/0:7,0:7:14.58:0,15,125	1/1:2,5:7:11.87:80,12,0	1/1:5,0:5:5.94:55,6,0	1/1:8,0:8:17.97:149,18,0	1/1:11,0:10:16.19:165,16,0	0/0:11,0:11:23.96:0,24,205	0/0:19,0:19:47.95:0,48,404	0/0:13,0:13:24.15:0,24,190
chr10	75058241	.	C	CT	6029.85	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-13.949;DP=545;FS=1.534;HRun=8;HaplotypeScore=49.7302;InbreedingCoeff=0.9861;MQ=72.02;MQ0=0;MQRankSum=-2.079;QD=28.99;ReadPosRankSum=1.202;VQSLOD=4.9791;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:81.24:935,81,0	0/0:8,0:8:12:0,12,110	0/0:11,0:11:20.99:0,21,185	0/0:10,0:10:14.11:0,14,148	0/0:30,0:30:77.98:0,78,702	0/0:18,0:19:47.05:0,47,414	0/0:19,0:19:51.02:0,51,467	0/0:35,0:35:93:0,93,838	1/1:1,14:15:42.12:483,42,0	1/1:2,12:14:36.11:416,36,0	1/1:0,18:18:51.11:574,51,0	1/1:1,20:22:57:638,57,0	1/1:2,15:17:36.11:415,36,0	0/0:17,0:17:48.02:0,48,439	0/0:18,0:18:51.03:0,51,467	1/1:0,17:17:39.12:450,39,0	0/0:24,0:24:69:0,69,621	0/0:12,0:12:35.99:0,36,324	0/0:20,0:20:51.01:0,51,462	0/0:33,0:33:81.03:0,81,741	0/0:17,0:17:41.98:0,42,373	1/1:6,13:19:11.65:388,12,0	1/1:0,20:20:57.17:658,57,0	1/1:3,11:14:33.10:381,33,0	1/1:2,20:22:60.18:693,60,0	0/0:30,1:31:46.38:0,46,667	0/0:24,0:24:72.02:0,72,654	0/0:9,0:9:18.01:0,18,165
chr10	75058516	.	TG	T	6425.25	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=8.652;DP=562;FS=2.630;HRun=9;HaplotypeScore=75.1175;InbreedingCoeff=0.9766;MQ=75.46;MQ0=1;MQRankSum=-1.562;QD=18.31;ReadPosRankSum=4.508;VQSLOD=5.3235;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,21:26:57.03:522,57,0	0/0:7,0:7:21.06:0,21,241	0/0:28,0:19:26.92:0,27,282	0/0:33,0:31:43.06:0,43,438	0/0:21,0:21:51.13:0,51,577	0/0:20,0:20:60.16:0,60,681	0/0:18,0:18:45.13:0,45,519	0/0:12,0:12:18.04:0,18,198	1/1:0,17:17:45.02:412,45,0	1/1:7,23:30:72.02:652,72,0	1/1:1,10:11:21.01:192,21,0	1/1:1,25:26:28.37:515,28,0	1/1:1,17:18:48.02:439,48,0	0/0:20,1:21:35.69:0,36,650	0/0:16,0:16:33.10:0,33,381	1/1:2,22:24:63.03:576,63,0	0/0:25,0:25:57.17:0,57,653	0/0:10,0:10:27.07:0,27,302	1/1:21,0:21:28.87:240,29,0	1/1:36,0:35:78.55:455,79,0	1/1:13,0:13:26.25:149,26,0	1/1:3,18:21:51.03:466,51,0	1/1:2,20:22:51.03:467,51,0	1/1:7,14:21:4.39:295,4,0	1/1:1,18:19:54.03:494,54,0	1/1:17,0:17:42.80:231,43,0	1/1:20,0:19:34.97:197,35,0	1/1:9,0:9:23.10:123,23,0
chr10	75058525	.	GC	G	4095.32	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=11.688;DP=549;FS=4.060;HRun=1;HaplotypeScore=79.9013;InbreedingCoeff=0.3692;MQ=79.10;MQ0=0;MQRankSum=-2.482;QD=11.77;ReadPosRankSum=7.428;VQSLOD=1.9852;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:1.20:41,1,0	0/0:7,0:7:21.06:0,21,284	0/0:25,0:17:8.63:0,9,363	0/0:27,0:26:52.35:0,52,625	0/0:18,0:18:54.17:0,54,750	0/0:22,0:22:63.17:0,63,861	0/0:18,0:18:54.13:0,54,715	0/0:15,0:15:41.98:0,42,459	0/1:18,0:18:4.42:31,0,4	0/1:29,0:29:37.53:38,0,89	0/1:11,0:11:10.92:24,0,11	0/1:32,0:32:21.55:22,0,127	0/1:21,0:21:53.94:54,0,62	0/0:24,0:24:64.61:0,65,894	0/0:14,0:14:42.09:0,42,542	0/1:27,0:27:30.64:31,0,64	0/0:22,0:22:63.15:0,63,852	0/0:9,0:9:27.09:0,27,382	1/1:0,17:17:51.14:669,51,0	1/1:4,32:35:99:1205,102,0	1/1:1,15:16:27.09:373,27,0	0/1:20,0:20:6.86:24,0,7	1/1:20,0:20:20.40:64,20,0	0/1:16,0:16:16.90:17,0,48	0/1:19,0:19:4.25:35,0,4	1/1:0,17:17:48.15:643,48,0	1/1:0,17:17:36.12:497,36,0	1/1:0,10:10:24.08:329,24,0
chr10	75059648	.	CTTT	C	2307.85	PASS	AB=0.615;AC=21;AF=0.375;AN=56;BaseQRankSum=2.098;DP=459;FS=1.016;HRun=17;HaplotypeScore=74.9529;InbreedingCoeff=0.8491;MQ=64.10;MQ0=5;MQRankSum=-3.322;QD=13.99;ReadPosRankSum=4.660;VQSLOD=1.3261;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,8:18:22.24:243,22,0	0/0:8,0:8:21.04:0,21,257	0/0:42,0:14:15.71:0,16,179	0/0:31,0:11:1.08:0,1,117	0/0:15,0:16:39.04:0,39,542	0/0:13,0:14:36.09:0,36,540	0/0:18,0:19:42.09:0,42,602	0/0:23,0:26:65.81:0,66,828	1/1:5,7:13:14.86:140,15,0	1/1:5,13:18:31.80:340,32,0	1/1:5,10:16:16.32:182,16,0	1/1:9,13:22:41.90:430,42,0	1/1:2,7:9:18:185,18,0	0/0:12,0:14:33.56:0,34,512	0/0:17,0:18:42.04:0,42,537	1/1:4,9:14:25.60:275,26,0	0/0:15,0:17:42.09:0,42,596	0/0:8,0:8:12.04:0,12,185	0/0:15,0:17:27.87:0,28,317	0/0:10,0:11:23.13:0,23,191	0/0:5,0:7:10.22:0,10,75	1/1:1,7:9:23.87:233,24,0	1/1:9,15:25:32.38:324,32,0	0/1:3,4:8:8.22:52,0,8	1/1:5,7:13:9.02:118,9,0	0/0:6,1:14:3.29:0,3,207	0/0:6,0:15:29.27:0,29,248	0/0:5,0:15:28.16:0,28,231
chr10	75059772	.	T	TGG	2142.68	PASS	AB=0.656;AC=11;AF=0.196;AN=56;BaseQRankSum=-4.818;DP=533;FS=0.000;HRun=8;HaplotypeScore=72.6813;InbreedingCoeff=0.9055;MQ=74.98;MQ0=0;MQRankSum=0.115;QD=20.03;ReadPosRankSum=-2.242;VQSLOD=1.5966;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,1122	0/0:8,0:8:21.06:0,21,234	0/0:14,0:14:32.93:0,33,316	0/0:11,0:10:8.43:0,8,125	0/0:23,0:23:69.18:0,69,764	0/0:24,0:24:63.12:0,63,683	0/0:18,0:18:42.08:0,42,458	0/0:25,0:25:38.95:0,39,426	0/0:13,0:13:30.07:0,30,334	0/0:18,0:18:45.11:0,45,501	0/0:20,0:20:48.12:0,48,534	0/0:28,0:28:72.18:0,72,802	0/0:16,0:16:36.07:0,36,401	0/0:19,0:19:45.10:0,45,502	0/0:27,0:27:78.21:0,78,869	0/0:27,0:27:69.17:0,69,769	0/0:16,0:16:48.13:0,48,535	0/0:14,0:14:36.08:0,36,401	1/1:6,9:17:26.40:322,26,0	1/1:6,14:20:36.08:535,36,0	1/1:5,18:23:33.11:524,33,0	0/0:18,0:18:42.07:0,42,451	0/0:12,0:12:30.08:0,30,334	0/0:15,0:15:42.03:0,42,451	0/0:22,0:22:54.12:0,54,601	0/1:10,10:21:3.37:366,0,3	1/1:8,9:18:24.03:336,24,0	1/1:2,6:8:15.05:238,15,0
chr10	75060199	.	AAG	A	3609.87	PASS	AB=0.983;AC=25;AF=0.446;AN=56;BaseQRankSum=0.353;DP=549;FS=26.144;HRun=0;HaplotypeScore=72.9473;InbreedingCoeff=0.7499;MQ=48.03;MQ0=10;MQRankSum=-4.149;QD=12.99;ReadPosRankSum=-4.143;VQSLOD=1.1929;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:72.78:548,73,0	0/0:7,0:7:14.46:0,14,174	0/0:25,0:5:13.43:0,13,97	0/0:15,0:7:2.71:0,3,34	0/1:18,1:19:9.54:10,0,185	0/0:19,0:18:9.71:0,10,337	0/0:20,0:20:5.93:0,6,279	0/1:29,0:27:8.15:8,0,452	1/1:15,0:14:30.27:222,30,0	1/1:24,1:24:68.62:514,69,0	1/1:24,0:21:53.97:401,54,0	1/1:18,0:15:32.40:254,32,0	1/1:16,0:15:38.04:315,38,0	0/0:10,0:10:20.62:0,21,159	0/0:19,0:16:18.47:0,18,328	1/1:23,0:22:50.49:396,50,0	0/0:40,0:38:47.04:0,47,796	0/1:17,0:16:0.33:0,0,222	0/0:19,0:18:21.46:0,21,275	0/0:27,0:25:22.64:0,23,288	0/0:6,0:5:10.22:0,10,75	1/1:10,0:10:23.82:173,24,0	1/1:20,0:18:31.95:279,32,0	1/1:9,0:9:8.61:55,9,0	1/1:22,1:23:58.42:436,58,0	0/0:18,1:19:14.76:0,15,309	0/0:42,0:42:40.02:0,40,575	0/0:3,0:3:6.80:0,7,43
chr10	75060200	.	AG	A	4024.35	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=0.779;DP=553;FS=36.758;HRun=1;HaplotypeScore=64.5078;InbreedingCoeff=0.7068;MQ=49.90;MQ0=10;MQRankSum=-5.912;QD=13.64;ReadPosRankSum=-2.392;VQSLOD=0.4436;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,1:30:85.06:622,85,0	0/0:7,0:7:17.71:0,18,161	0/0:28,0:8:19.12:0,19,178	0/1:15,0:7:1.85:2,0,9	0/1:19,0:19:0.81:1,0,158	0/0:19,1:19:2.23:0,2,295	0/0:18,0:18:13.78:0,14,225	0/1:28,0:26:12.71:13,0,397	1/1:15,0:14:40.20:306,40,0	1/1:26,0:25:71.03:545,71,0	1/1:25,0:22:56.32:435,56,0	1/1:17,1:15:35.97:314,36,0	1/1:16,0:15:44.05:326,44,0	0/0:10,0:10:12.85:0,13,131	0/0:19,0:16:13.51:0,14,242	1/1:23,0:22:55.46:404,55,0	0/0:39,0:37:38.32:0,38,587	0/1:18,0:17:3.55:4,0,189	0/0:20,1:20:4.37:0,4,255	0/0:26,0:24:26.63:0,27,295	0/0:6,0:5:10.22:0,10,75	1/1:9,1:10:25.37:187,25,0	1/1:19,1:18:48.70:343,49,0	1/1:9,0:9:8.61:64,9,0	1/1:23,0:23:61.20:459,61,0	0/0:19,0:19:27.06:0,27,313	0/0:41,1:42:6.47:0,6,447	0/0:3,0:3:8.33:0,8,47
chr10	75060569	.	TAAA	T	3628.53	PASS	AB=0.569;AC=28;AF=0.500;AN=56;BaseQRankSum=3.602;DP=399;FS=0.000;HRun=14;HaplotypeScore=69.6188;InbreedingCoeff=0.6481;MQ=54.14;MQ0=4;MQRankSum=0.394;QD=15.71;ReadPosRankSum=5.020;VQSLOD=2.0405;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:14:33.07:386,33,0	0/0:7,0:7:21.07:0,21,382	0/0:14,0:5:15.03:0,15,203	0/0:13,0:6:3.01:0,3,56	0/0:12,0:12:30.10:0,30,540	0/0:20,0:23:51.15:0,51,912	0/0:15,0:15:8.75:0,9,506	0/0:22,0:20:39.13:0,39,732	1/1:4,10:15:29.97:333,30,0	0/1:7,2:22:12.87:48,0,13	0/1:5,1:15:36.01:36,0,36	1/1:3,10:13:27:297,27,0	1/1:3,5:9:11.90:123,12,0	0/0:11,0:11:27.05:0,27,402	0/0:7,0:10:30.04:0,30,464	0/1:4,1:14:19.12:19,0,26	0/0:19,0:22:53.72:0,54,932	0/0:13,0:11:15.05:0,15,281	1/1:1,7:6:15.04:175,15,0	1/1:1,13:13:33:370,33,0	1/1:2,9:11:27.05:316,27,0	1/1:3,6:10:10.54:138,11,0	1/1:1,10:12:20.85:228,21,0	1/1:6,9:16:29.90:316,30,0	0/1:1,1:22:12.13:12,0,20	1/1:3,14:17:39.03:446,39,0	1/1:3,11:14:33.05:386,33,0	0/0:3,0:3:0:0,0,0
chr10	75060700	.	GAAAAAAAAAAAAAAAGAAAAAAAAAAAA	G	1494.52	PASS	AB=0.923;AC=15;AF=0.357;AN=42;BaseQRankSum=3.832;DP=287;FS=3.497;HRun=0;HaplotypeScore=72.4072;InbreedingCoeff=0.3795;MQ=21.95;MQ0=148;MQRankSum=-0.547;QD=18.45;ReadPosRankSum=3.338;VQSLOD=1.2539;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:3:2.50:0,2,9	0/0:2,0:1:3.01:0,3,319	./.	./.	0/0:14,0:11:15.05:0,15,1053	0/0:14,0:3:6.02:0,6,640	./.	0/0:14,0:5:2.59:0,3,10	1/1:6,1:4:2.23:368,2,0	1/1:9,2:7:6.01:227,6,0	1/1:8,0:7:2.96:19,3,0	1/1:3,2:2:3.01:202,3,0	0/1:7,3:5:2.24:197,0,2	0/0:12,0:7:6.02:0,6,123	0/0:10,0:5:3.89:0,4,58	1/1:7,3:8:1.72:398,2,0	0/0:16,0:3:3.01:0,3,165	0/0:11,0:2:3.01:0,3,348	./.	0/0:5,0:8:8.68:0,9,330	./.	0/1:4,0:2:0:0,0,0	0/1:13,0:11:0:0,0,0	./.	1/1:5,4:8:3.01:202,3,0	0/0:12,0:8:9:0,9,461	./.	0/0:15,0:5:3.01:0,3,154
chr10	75060972	.	A	AC	877.99	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=2.726;DP=456;FS=0.642;HRun=9;HaplotypeScore=63.7317;InbreedingCoeff=0.9331;MQ=57.11;MQ0=34;MQRankSum=-1.584;QD=17.22;ReadPosRankSum=-1.461;VQSLOD=3.4073;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:47.97:0,48,416	0/0:5,0:5:12:0,12,104	0/0:16,0:9:6.75:0,7,114	0/0:18,0:14:8.67:0,9,171	0/0:14,0:14:38.99:0,39,338	0/0:19,1:20:14.83:0,15,354	0/0:15,0:15:29.99:0,30,260	0/0:19,0:16:26.95:0,27,229	0/0:12,0:11:32.95:0,33,279	1/1:5,9:12:27.07:299,27,0	1/1:4,13:16:33.08:358,33,0	0/0:18,0:17:38.97:0,39,338	0/0:29,0:26:71.97:0,72,624	0/0:20,0:18:47.99:0,48,416	0/0:12,0:12:32.99:0,33,286	1/1:1,9:9:21.06:232,21,0	0/0:30,0:27:71.97:0,72,622	0/0:8,0:8:23.91:0,24,194	0/0:15,0:8:24:0,24,208	0/0:18,0:16:34.93:0,35,277	0/0:11,0:9:20.99:0,21,182	0/0:13,0:11:23.97:0,24,208	0/0:19,0:18:44.97:0,45,390	0/0:8,0:8:18:0,18,156	1/1:3,6:10:14.87:147,15,0	0/0:19,1:20:20.81:0,21,409	0/0:30,0:30:77.98:0,78,675	0/0:13,0:13:26.99:0,27,234
chr10	75061671	.	GA	G	426.91	PASS	AB=0.875;AC=29;AF=0.630;AN=46;BaseQRankSum=5.845;DP=247;FS=13.304;HRun=8;HaplotypeScore=31.4127;InbreedingCoeff=0.5758;MQ=25.75;MQ0=67;MQRankSum=-3.585;QD=3.95;ReadPosRankSum=2.802;VQSLOD=-0.5974;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,7:4:3:28,3,0	0/0:7,0:5:5.91:0,6,52	./.	./.	./.	0/0:15,0:11:8.99:0,9,92	0/0:9,0:5:9.03:0,9,105	0/0:17,0:6:15.05:0,15,180	1/1:4,3:6:2.90:16,3,0	1/1:0,1:1:2.90:16,3,0	1/1:2,3:2:5.91:43,6,0	1/1:4,3:2:2.90:16,3,0	1/1:2,4:6:8.70:47,9,0	0/0:13,0:9:11.95:0,12,112	0/0:9,0:7:6.28:0,6,50	1/1:2,3:3:8.75:59,9,0	0/0:20,0:15:7.84:0,8,78	0/0:19,0:11:6.01:0,6,72	1/1:4,4:3:9.01:85,9,0	1/1:1,7:5:0.86:20,1,0	./.	1/1:0,2:1:2.90:16,3,0	1/1:0,3:3:5.78:31,6,0	1/1:3,8:6:11.91:99,12,0	0/1:6,1:5:0:0,0,0	1/1:3,3:1:3:28,3,0	1/1:6,7:7:8.96:78,9,0	./.
chr10	75061680	.	GAAAAAAGAAAAAAAAA	G	1402.16	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=6.393;DP=277;FS=11.990;HRun=0;HaplotypeScore=61.6668;InbreedingCoeff=0.6580;MQ=26.50;MQ0=66;MQRankSum=-2.203;QD=26.46;ReadPosRankSum=5.715;VQSLOD=0.1474;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,5:1:2.97:20,3,0	0/0:4,0:4:12.04:0,12,801	./.	0/0:10,0:2:2.68:0,3,11	0/0:8,0:4:6.02:0,6,145	0/0:17,0:12:9.03:0,9,563	0/0:15,0:10:17.96:0,18,483	0/0:21,0:11:22.70:0,23,692	1/1:7,2:5:3.01:116,3,0	1/1:0,0:1:3.01:100,3,0	1/1:2,0:2:5.98:124,6,0	1/1:3,0:1:3.01:107,3,0	1/1:1,3:4:9.03:349,9,0	0/0:12,0:9:5.93:0,6,197	0/0:13,0:10:18.06:0,18,803	1/1:3,1:3:8.90:234,9,0	0/0:29,0:23:27.09:0,27,1458	0/0:23,0:16:21.07:0,21,1020	0/0:14,0:8:24.06:0,24,565	0/0:9,0:7:15.04:0,15,493	0/0:7,0:3:5.97:0,6,122	1/1:1,1:1:3.01:116,3,0	1/1:2,2:3:6.02:233,6,0	1/1:7,2:5:11.89:175,12,0	0/0:4,0:2:2.60:0,3,10	0/0:10,0:5:11.93:0,12,204	0/0:15,0:9:17.75:0,18,554	0/0:10,0:2:3:0,3,27
chr10	75061699	.	A	ACC	463.19	PASS	AB=0.929;AC=16;AF=0.286;AN=56;BaseQRankSum=4.699;DP=437;FS=3.539;HRun=0;HaplotypeScore=60.6205;InbreedingCoeff=0.5365;MQ=48.52;MQ0=62;MQRankSum=0.321;QD=3.17;ReadPosRankSum=-2.516;VQSLOD=1.0046;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:11:8.24:59,8,0	0/0:7,0:7:21.05:0,21,258	0/1:40,0:9:3.12:3,0,84	0/0:26,0:6:0.68:0,1,42	0/0:8,0:6:12.04:0,12,159	0/0:18,0:14:18.04:0,18,233	0/0:14,0:11:24.03:0,24,288	0/0:24,0:17:36.59:0,37,470	0/1:13,0:10:12.29:33,0,12	1/1:6,0:6:17.68:168,18,0	0/1:2,5:8:4.26:4,0,22	0/1:9,0:7:0.16:60,0,0	0/1:7,0:7:6.14:6,0,6	0/0:13,0:12:21.07:0,21,286	0/0:15,0:12:24.08:0,24,321	1/1:9,0:6:9.22:78,9,0	0/0:31,0:26:39.07:0,39,460	0/0:23,0:18:30.06:0,30,373	0/0:19,0:13:39.09:0,39,476	0/0:15,0:13:36.08:0,36,417	0/0:8,0:5:14.41:0,14,147	0/1:11,0:11:0.01:4,0,0	0/0:13,0:12:2.49:0,2,7	1/1:12,0:10:6.47:31,6,0	1/1:9,0:7:17.94:184,18,0	0/0:21,0:19:51.13:0,51,628	0/0:21,0:16:36.11:0,36,455	0/0:14,0:4:6.01:0,6,63
chr10	75061700	.	A	ACC	666.40	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=5.979;DP=457;FS=9.026;HRun=0;HaplotypeScore=68.3656;InbreedingCoeff=0.6819;MQ=49.82;MQ0=62;MQRankSum=-1.086;QD=3.99;ReadPosRankSum=-0.259;VQSLOD=0.9812;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:14:9.99:93,10,0	0/0:7,0:7:21.05:0,21,258	0/1:41,0:10:2.23:2,0,114	0/0:27,0:6:3.40:0,3,36	0/0:8,0:6:12.04:0,12,159	0/0:18,0:14:18.06:0,18,251	0/0:14,0:11:24.02:0,24,286	0/0:25,0:18:39.58:0,40,497	1/1:14,0:11:8.99:130,9,0	0/1:6,0:6:6.35:28,0,6	0/0:10,0:10:5.97:0,6,48	1/1:11,0:9:7.09:132,7,0	1/1:9,0:9:18.41:124,18,0	0/0:12,0:11:21.07:0,21,285	0/0:16,0:13:24.08:0,24,315	0/1:10,0:7:5.45:59,0,5	0/0:31,0:27:39.02:0,39,449	0/0:23,0:18:30.06:0,30,378	0/0:19,0:13:39.09:0,39,481	0/0:15,0:13:36.09:0,36,424	0/0:9,0:6:15.02:0,15,160	1/1:3,9:12:5.15:23,5,0	1/1:5,11:16:3.94:48,4,0	1/1:13,0:11:17.06:157,17,0	1/1:9,0:7:10.66:57,11,0	0/0:21,0:19:51.11:0,51,628	0/0:21,0:16:36.10:0,36,452	0/0:14,0:4:9:0,9,86
chr10	75063170	.	T	TG	11124.88	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-16.033;DP=744;FS=15.200;HRun=2;HaplotypeScore=78.7930;InbreedingCoeff=0.9921;MQ=67.38;MQ0=0;MQRankSum=-1.251;QD=36.96;ReadPosRankSum=4.811;VQSLOD=3.7477;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:31:81.27:1166,81,0	0/0:17,0:17:51.16:0,51,632	0/0:36,0:34:90.14:0,90,1054	0/0:27,0:26:74.82:0,75,897	0/0:28,0:28:78.24:0,78,967	0/0:33,0:33:97.84:0,98,1180	0/0:24,0:24:72.23:0,72,892	0/0:30,0:30:87.26:0,87,1058	1/1:1,16:17:10.97:611,11,0	1/1:1,36:37:99:1501,108,0	1/1:1,12:13:33.11:469,33,0	1/1:0,33:33:93.31:1339,93,0	1/1:2,22:24:51.17:734,51,0	0/0:21,0:21:60.19:0,60,743	0/0:33,0:33:93.28:0,93,1140	1/1:2,20:22:54.18:778,54,0	0/0:21,0:21:60.18:0,60,730	0/0:15,0:15:45.12:0,45,543	0/0:22,0:22:60.18:0,60,734	0/0:33,0:33:90.28:0,90,1113	0/0:48,0:48:99:0,129,1609	1/1:1,38:39:99:1423,99,0	1/1:1,36:37:93.31:1335,93,0	1/1:2,26:28:72.24:1037,72,0	1/1:3,17:20:51.17:733,51,0	0/0:24,0:24:69.21:0,69,845	0/0:26,0:26:78.25:0,78,966	0/0:5,0:5:15.03:0,15,171
chr10	75063445	.	T	TCAAAACAAAA	17520.28	PASS	AB=1.000;AC=33;AF=0.611;AN=54;BaseQRankSum=0.650;DP=670;FS=11.587;HRun=0;HaplotypeScore=197.4595;InbreedingCoeff=0.8678;MQ=62.25;MQ0=2;MQRankSum=-9.815;QD=40.65;ReadPosRankSum=-3.924;VQSLOD=2.3593;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,1:25:8.97:399,9,0	0/0:11,0:11:21.04:0,21,555	0/0:37,0:33:14.60:0,15,329	0/0:22,0:20:12.04:0,12,184	0/0:18,0:18:21.07:0,21,605	0/0:19,0:19:21.07:0,21,624	0/0:30,0:30:42.14:0,42,1232	0/0:31,0:31:18.04:0,18,409	1/1:17,0:22:12.04:504,12,0	1/1:19,8:26:30.09:1187,30,0	1/1:12,10:24:39.13:1493,39,0	1/1:23,0:28:30.10:1260,30,0	1/1:12,0:16:15.05:575,15,0	0/0:22,0:22:51.18:0,51,1475	0/0:20,0:20:33.11:0,33,936	1/1:18,7:25:30.10:1418,30,0	0/0:26,0:26:42.14:0,42,1203	0/1:34,0:34:42.26:42,0,912	1/1:19,4:22:27.05:905,27,0	1/1:20,13:33:63.22:2630,63,0	1/1:14,2:17:3.01:149,3,0	1/1:31,0:33:33.11:1258,33,0	1/1:20,0:26:27.09:1063,27,0	1/1:12,0:20:15.05:472,15,0	1/1:16,4:21:24.08:1122,24,0	1/1:13,5:23:39.11:1366,39,0	1/1:21,9:33:36.12:1677,36,0	./.
chr10	75064511	.	G	GT	6706.21	PASS	AB=0.618;AC=21;AF=0.375;AN=56;BaseQRankSum=10.542;DP=609;FS=3.811;HRun=8;HaplotypeScore=84.1771;InbreedingCoeff=0.9004;MQ=67.73;MQ0=2;MQRankSum=-8.778;QD=29.41;ReadPosRankSum=-0.323;VQSLOD=4.4192;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,17:22:51.14:577,51,0	0/0:14,0:14:39.02:0,39,357	0/0:30,0:22:36.98:0,37,296	0/0:18,0:15:16.29:0,16,151	0/0:28,0:29:83.06:0,83,739	0/0:14,0:14:42.01:0,42,380	0/0:29,0:29:55.87:0,56,615	0/0:30,0:29:74.96:0,75,664	1/1:3,18:21:60.14:669,60,0	1/1:7,19:26:66.18:742,66,0	1/1:5,20:25:72.18:809,72,0	1/1:2,13:15:42.12:484,42,0	1/1:1,21:22:63.10:709,63,0	0/0:18,0:18:51.02:0,51,463	0/0:35,0:35:90.04:0,90,823	1/1:4,13:17:51.11:559,51,0	0/0:28,0:28:71.92:0,72,638	0/0:21,0:21:57.02:0,57,518	0/0:18,0:18:35.99:0,36,325	0/0:20,0:20:47.91:0,48,422	0/0:9,0:9:21:0,21,189	1/1:2,15:17:48.14:553,48,0	1/1:7,14:21:57.11:625,57,0	0/1:8,13:20:12.98:337,0,13	1/1:3,18:21:57.13:643,57,0	0/0:27,1:28:3.02:0,3,510	0/0:24,0:24:60.02:0,60,549	0/0:15,0:14:36.02:0,36,329
chr10	75064516	.	T	TG	1566.55	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=16.311;DP=612;FS=4.905;HRun=0;HaplotypeScore=102.1054;InbreedingCoeff=0.5915;MQ=64.68;MQ0=6;MQRankSum=-9.281;QD=6.58;ReadPosRankSum=3.814;VQSLOD=3.3712;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:25.25:149,0,25	0/0:14,0:13:39.13:0,39,544	0/0:27,0:17:45.13:0,45,585	0/0:21,0:15:18.72:0,19,315	0/0:30,0:30:87.13:0,87,1163	0/0:14,0:14:42.14:0,42,586	0/0:23,3:26:36.22:0,36,927	0/0:28,0:27:81.26:0,81,1100	1/1:21,0:21:33.80:169,34,0	0/1:29,0:29:99:159,0,116	1/1:26,0:26:30.93:214,31,0	1/1:15,0:15:14.32:127,14,0	0/1:24,0:24:6.27:187,0,6	0/0:19,0:19:57.17:0,57,764	0/0:32,0:32:96.30:0,96,1312	1/1:18,0:18:29.48:125,29,0	0/0:30,0:30:81.24:0,81,1075	0/0:19,0:19:57.19:0,57,795	0/0:17,0:17:45.12:0,45,570	0/0:20,1:21:57.15:0,57,734	0/0:9,0:9:24.07:0,24,320	1/1:19,0:19:32.26:197,32,0	0/1:25,0:25:29.93:132,0,30	0/1:20,0:19:95.96:99,0,96	1/1:20,0:20:26.11:205,26,0	0/0:29,0:28:62.85:0,63,996	0/0:22,0:22:66.20:0,66,879	0/0:16,0:14:36.12:0,36,503
chr10	75064532	.	G	GT	7072.72	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.734;DP=611;FS=0.329;HRun=7;HaplotypeScore=85.0499;InbreedingCoeff=0.9486;MQ=52.66;MQ0=8;MQRankSum=-11.350;QD=29.47;ReadPosRankSum=-0.051;VQSLOD=4.8639;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:21:54.16:644,54,0	0/0:15,0:14:36.02:0,36,340	0/0:16,0:3:2.97:0,3,20	0/0:22,0:11:2.64:0,3,85	0/0:30,0:30:87.14:0,87,840	0/0:12,0:12:27.03:0,27,255	0/0:25,0:25:66.10:0,66,636	0/0:27,0:26:62.99:0,63,608	1/1:4,15:19:48.13:554,48,0	1/1:3,29:30:81.25:973,81,0	1/1:5,18:22:51.14:599,51,0	1/1:3,9:12:33.10:398,33,0	1/1:4,21:25:72.19:834,72,0	0/0:24,0:23:66.11:0,66,637	0/0:37,0:37:99:0,99,949	1/1:3,15:17:39.12:468,39,0	0/0:25,0:25:69.11:0,69,666	0/0:20,0:20:56.93:0,57,520	0/0:22,0:21:54.09:0,54,520	0/0:23,0:23:54.05:0,54,514	0/0:11,0:11:27.04:0,27,261	1/1:4,19:23:63.19:751,63,0	1/1:2,19:21:57.17:687,57,0	1/1:6,15:21:33.09:393,33,0	1/1:3,22:25:66.19:772,66,0	0/0:25,1:25:26.86:0,27,535	0/0:21,0:21:60.10:0,60,579	0/0:15,0:13:39.06:0,39,376
chr10	75065051	.	CACACACACATACACACACACACACACAG	C	1686.03	PASS	AB=0.908;AC=12;AF=0.214;AN=56;BaseQRankSum=0.069;DP=607;FS=6.026;HRun=0;HaplotypeScore=319.9380;InbreedingCoeff=-0.1256;MQ=48.29;MQ0=46;MQRankSum=0.386;QD=6.59;ReadPosRankSum=-4.922;VQSLOD=0.9324;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:35:99:279,0,907	0/0:11,0:11:26.30:0,26,1605	0/0:18,0:2:6.02:0,6,95	0/0:13,0:5:11.28:0,11,124	0/0:21,0:19:42.14:0,42,2935	0/0:24,0:23:54.17:0,54,3781	0/0:34,0:30:66.35:0,66,2768	0/0:21,0:20:58.13:0,58,1219	0/1:19,0:17:72.16:72,0,837	0/1:15,0:13:99:356,0,200	0/1:2,13:15:23.31:43,0,23	0/1:19,0:19:99:115,0,1464	0/0:17,0:17:17.39:0,17,1432	0/0:23,0:17:33.10:0,33,2898	0/0:21,0:18:37.95:0,38,2463	1/1:1,20:20:6.02:457,6,0	0/0:41,0:38:99:0,101,5666	0/0:26,0:22:49.30:0,49,3750	0/0:14,0:14:34.89:0,35,1098	0/0:21,0:20:6.01:0,6,119	0/1:50,0:44:99:270,0,2957	0/0:22,0:21:6.09:0,6,234	0/1:14,0:14:23.94:24,0,653	0/1:29,0:27:20.65:21,0,1917	0/1:3,15:18:43.02:150,0,43	0/1:19,0:18:50.22:50,0,1275	0/0:19,0:15:21.14:0,21,715	0/0:5,0:3:8.86:0,9,170
chr10	75065055	.	C	CAT	451.35	PASS	AB=0.883;AC=8;AF=0.143;AN=56;BaseQRankSum=5.825;DP=601;FS=4.088;HRun=0;HaplotypeScore=134.0749;InbreedingCoeff=0.0683;MQ=50.45;MQ0=39;MQRankSum=2.048;QD=3.07;ReadPosRankSum=0.379;VQSLOD=2.3053;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:52.34:0,52,498	0/0:11,0:11:23.89:0,24,214	0/0:20,0:3:8.99:0,9,80	0/0:13,0:7:11.48:0,11,97	0/0:20,0:18:41.74:0,42,412	0/0:24,0:23:56.97:0,57,563	0/0:35,0:32:59.19:0,59,544	0/0:23,0:22:34.49:0,34,348	0/0:21,0:19:35.63:0,36,254	0/0:11,0:10:26.71:0,27,201	0/0:15,0:15:2.92:0,3,17	0/0:20,0:20:44.27:0,44,347	0/0:16,0:16:41.34:0,41,291	0/0:20,0:15:29.84:0,30,328	0/0:21,0:18:21.07:0,21,316	0/0:21,0:20:5.68:0,6,28	0/0:40,0:37:87.35:0,87,850	0/0:24,0:22:45.28:0,45,429	0/1:14,0:14:52.59:53,0,86	0/1:10,14:23:0.25:0,0,14	0/1:46,0:41:45.92:338,0,46	0/1:22,0:21:8.15:8,0,19	0/0:15,0:15:26.73:0,27,204	0/0:30,0:29:53.62:0,54,450	0/0:16,0:16:5.16:0,5,25	1/1:19,0:19:0.79:105,1,0	0/1:9,9:14:29.16:49,0,29	0/1:4,0:3:4.77:19,0,5
chr10	75065059	.	CAT	C	3526.60	PASS	AB=0.937;AC=35;AF=0.625;AN=56;BaseQRankSum=8.670;DP=610;FS=1.280;HRun=0;HaplotypeScore=121.5381;InbreedingCoeff=0.4781;MQ=51.19;MQ0=37;MQRankSum=-0.509;QD=8.40;ReadPosRankSum=-0.029;VQSLOD=3.3910;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:33:65.51:525,66,0	0/1:11,0:11:15.01:15,0,102	0/0:22,0:5:14.42:0,14,86	0/1:18,0:11:19.37:19,0,63	0/0:22,0:20:12.22:0,12,360	0/0:26,0:25:43.83:0,44,574	0/0:33,0:30:39.11:0,39,437	0/0:24,0:24:35.85:0,36,334	1/1:18,3:19:38.66:290,39,0	1/1:13,0:11:11.63:176,12,0	1/1:15,0:15:2.90:16,3,0	1/1:20,0:21:50.22:381,50,0	1/1:16,1:17:43.67:311,44,0	0/0:20,0:16:16.67:0,17,291	0/0:19,0:17:5.02:0,5,243	1/1:21,0:20:5.75:30,6,0	0/1:39,0:36:51.33:51,0,488	0/0:23,0:21:37.09:0,37,404	0/1:7,6:13:7.70:118,0,8	1/1:23,0:22:8.74:72,9,0	1/1:47,1:43:6.30:445,6,0	1/1:8,15:22:2.18:7,2,0	1/1:14,0:14:23.96:197,24,0	1/1:28,1:28:55.18:438,55,0	1/1:16,0:16:4.77:24,5,0	1/1:3,18:21:19.50:293,19,0	0/1:19,0:15:13.17:75,0,13	1/1:4,0:3:1.65:41,2,0
chr10	75065202	.	AAAAAGCT	A	5095.65	PASS	AB=0.564;AC=11;AF=0.196;AN=56;BaseQRankSum=11.778;DP=666;FS=18.083;HRun=0;HaplotypeScore=155.1843;InbreedingCoeff=0.8449;MQ=82.10;MQ0=0;MQRankSum=-11.096;QD=48.53;ReadPosRankSum=1.130;VQSLOD=3.6774;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.27:0,78,3022	0/0:9,0:9:24.08:0,24,916	0/0:28,0:28:69.21:0,69,2267	0/0:21,0:21:48.16:0,48,1611	0/0:30,0:30:87.30:0,87,3298	0/0:38,0:38:99:0,105,3841	0/0:25,0:25:72.23:0,72,2636	0/0:32,0:32:84.29:0,84,3173	0/0:20,0:20:57.20:0,57,2193	0/0:29,0:29:81.75:0,82,3121	0/0:20,0:20:57.20:0,57,2192	0/0:25,0:25:69.22:0,69,2532	0/0:18,0:18:54.17:0,54,1985	0/0:37,0:37:99:0,111,4287	0/0:27,0:27:81.28:0,81,3102	0/0:30,0:30:84.25:0,84,2912	0/0:28,0:28:84.27:0,84,3107	0/0:21,0:21:54.19:0,54,2012	1/1:4,9:13:27.08:604,27,0	1/1:2,16:18:39.13:988,39,0	1/1:2,16:18:33.07:769,33,0	0/0:19,0:19:54.18:0,54,1893	0/0:25,0:25:72.23:0,72,2736	0/0:32,0:32:90.31:0,90,3430	0/0:20,0:20:54.19:0,54,2017	0/1:5,17:22:66.89:1062,0,67	1/1:5,25:29:63.22:1596,63,0	1/1:0,4:4:3.01:76,3,0
chr10	75067808	.	G	GA	2134.20	PASS	AB=0.948;AC=22;AF=0.393;AN=56;BaseQRankSum=2.176;DP=545;FS=3.317;HRun=12;HaplotypeScore=97.2822;InbreedingCoeff=0.2301;MQ=51.63;MQ0=20;MQRankSum=-2.190;QD=7.49;ReadPosRankSum=-2.620;VQSLOD=2.3659;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:33,2:34:43.97:268,0,44	0/1:9,0:9:9.77:10,0,68	0/0:14,0:4:2.94:0,3,20	0/0:4,0:1:0.47:0,0,1	0/0:30,0:29:41.61:0,42,304	0/0:23,0:24:29.55:0,30,242	0/0:27,0:30:27.32:0,27,292	0/0:18,0:18:17.78:0,18,130	1/1:10,2:11:7.27:168,7,0	1/1:20,7:25:29.87:375,30,0	0/1:17,5:20:0.45:264,0,0	0/1:11,1:11:20.78:92,0,21	1/1:14,4:19:19.71:250,20,0	0/0:23,0:23:7.89:0,8,81	0/0:23,0:23:23.62:0,24,164	1/1:16,3:18:16.82:252,17,0	0/0:32,0:35:63.73:0,64,416	0/0:24,0:23:10.19:0,10,213	0/1:16,1:15:18.61:19,0,34	0/1:12,0:13:8.36:8,0,80	0/1:7,1:7:12.29:23,0,12	1/1:10,2:11:18.39:136,18,0	1/1:19,1:20:5.14:191,5,0	0/1:25,1:27:6.24:183,0,6	0/1:13,0:13:12.69:40,0,13	0/0:20,0:19:17.51:0,18,182	0/1:19,0:19:17.83:33,0,18	0/0:10,0:5:5.85:0,6,38
chr10	75067821	.	G	GA	1348.60	PASS	AB=0.874;AC=13;AF=0.232;AN=56;BaseQRankSum=-4.866;DP=603;FS=3.045;HRun=12;HaplotypeScore=81.9661;InbreedingCoeff=0.6697;MQ=58.39;MQ0=16;MQRankSum=2.754;QD=9.99;ReadPosRankSum=-2.691;VQSLOD=2.6731;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:37:34.96:0,35,136	0/0:12,0:14:24.42:0,24,163	0/0:24,0:7:11:0,11,63	0/1:13,0:7:19.19:19,0,30	0/0:29,4:32:25.52:0,26,344	0/0:23,0:23:45.57:0,46,331	0/0:28,0:28:26.86:0,27,286	0/0:23,0:23:30.84:0,31,229	0/0:18,0:17:16.80:0,17,54	0/0:24,0:25:21.71:0,22,76	0/0:18,0:19:19.80:0,20,70	0/0:11,0:15:19.15:0,19,62	0/0:19,0:22:16.82:0,17,56	0/0:21,1:21:9.63:0,10,235	0/0:20,1:21:3.29:0,3,177	0/0:15,0:16:20.44:0,20,68	0/0:35,2:39:22.76:0,23,448	0/0:24,0:22:22.83:0,23,157	0/1:7,11:17:7.62:239,0,8	1/1:7,12:20:18.14:296,18,0	1/1:2,8:9:6.01:58,6,0	0/0:15,0:16:15.19:0,15,53	0/0:15,0:16:24.62:0,25,90	0/0:26,0:27:27.64:0,28,108	0/1:5,0:15:3.57:18,0,4	1/1:11,21:30:40.74:491,41,0	1/1:15,4:18:35.46:311,35,0	1/1:6,2:5:11.68:92,12,0
chr10	75067920	.	G	GC	18571.65	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-11.268;DP=708;FS=13.013;HRun=1;HaplotypeScore=68.8486;InbreedingCoeff=0.9999;MQ=75.37;MQ0=0;MQRankSum=-1.090;QD=41.45;ReadPosRankSum=3.233;VQSLOD=4.3476;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,40:42:99:1573,105,0	0/0:18,0:18:54.15:0,54,673	0/0:15,0:15:42.99:0,43,524	0/0:13,0:13:33.09:0,33,411	0/0:24,0:24:63.20:0,63,816	0/0:28,0:28:78.25:0,78,1012	0/0:31,0:31:84.26:0,84,1075	0/0:15,0:15:36.11:0,36,456	1/1:0,22:22:51.17:764,51,0	1/1:1,35:36:99:1584,108,0	1/1:0,15:15:42.14:629,42,0	1/1:1,26:26:75.25:1124,75,0	1/1:0,18:18:54.18:809,54,0	0/0:23,0:23:69.22:0,69,896	0/0:31,0:31:84.26:0,84,1076	1/1:0,22:22:60.20:898,60,0	0/0:43,0:43:99:0,126,1620	0/0:19,0:19:45.15:0,45,581	1/1:0,20:20:60.20:897,60,0	1/1:0,36:37:99:1601,108,0	1/1:0,46:46:99:1844,123,0	1/1:0,24:24:66.22:989,66,0	1/1:1,22:23:60.20:898,60,0	1/1:1,31:32:81.23:1189,81,0	1/1:0,15:15:45.15:674,45,0	1/1:0,28:28:84.28:1257,84,0	1/1:0,28:28:84.28:1259,84,0	1/1:0,13:13:39.13:584,39,0
chr10	75070182	.	T	TATCACACCCA	15712.45	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-8.470;DP=653;FS=0.380;HRun=0;HaplotypeScore=175.8794;InbreedingCoeff=0.9115;MQ=86.86;MQ0=0;MQRankSum=-14.993;QD=60.43;ReadPosRankSum=0.697;VQSLOD=4.6551;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,9:17:12.04:616,12,0	0/0:9,0:9:27.09:0,27,807	0/0:29,0:29:68.81:0,69,1823	0/0:24,0:24:45.01:0,45,1127	0/0:29,0:29:78.24:0,78,2286	0/0:38,0:38:99:0,105,3069	0/0:20,0:20:48.16:0,48,1485	0/0:36,0:36:78.23:0,78,2043	1/1:5,20:27:39.13:1711,39,0	1/1:21,0:21:48.13:1679,48,0	1/1:15,0:15:27.05:1136,27,0	1/1:7,17:27:42.14:2001,42,0	1/1:3,12:17:27.09:1287,27,0	0/0:38,0:38:99:0,105,3075	0/0:22,0:22:60.19:0,60,1817	1/1:25,0:25:45.15:2078,45,0	0/0:14,0:14:39.13:0,39,1226	0/0:12,0:12:36.11:0,36,1018	0/0:16,0:16:39.12:0,39,1080	0/0:22,0:22:57.18:0,57,1726	0/0:41,0:41:99:0,114,3372	1/1:5,7:13:23.95:830,24,0	1/1:3,9:12:24.08:1231,24,0	1/1:12,11:24:8.53:461,9,0	1/1:23,0:23:57.20:2637,57,0	0/1:39,0:39:46.30:46,0,2382	0/0:26,0:26:72.25:0,72,2220	0/0:17,0:17:45.15:0,45,1418
chr10	75070188	.	A	ACCCAATCACT	16091.24	PASS	AB=0.985;AC=19;AF=0.339;AN=56;BaseQRankSum=-7.372;DP=637;FS=3.805;HRun=0;HaplotypeScore=178.1702;InbreedingCoeff=0.6282;MQ=85.98;MQ0=0;MQRankSum=-13.731;QD=65.68;ReadPosRankSum=1.625;VQSLOD=4.9107;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:11.96:398,0,12	0/0:9,0:9:27.09:0,27,830	0/0:28,0:28:77.63:0,78,2047	0/0:22,0:22:44.30:0,44,1303	0/0:29,0:29:84.17:0,84,2429	0/0:39,0:39:99:0,114,3267	0/0:18,0:18:48.16:0,48,1560	0/0:31,0:31:84.25:0,84,2270	1/1:18,0:18:7.15:1438,7,0	1/1:2,10:27:69.17:2644,69,0	1/1:2,9:21:32.86:1322,33,0	0/1:20,0:20:1.84:1698,0,2	1/1:12,0:12:12.10:1109,12,0	0/0:37,0:37:99:0,105,3187	0/0:22,0:22:60.19:0,60,1880	1/1:0,15:29:45.15:2357,45,0	0/0:16,0:16:48.09:0,48,1340	0/0:15,0:15:45.06:0,45,1150	0/0:17,0:17:48.14:0,48,1266	0/0:22,0:22:57.18:0,57,1786	0/0:41,0:41:99:0,117,3507	0/1:15,0:15:31.54:662,0,32	1/1:12,0:12:24.08:1096,24,0	0/1:18,0:18:11.46:298,0,11	1/1:0,19:25:57.20:2980,57,0	0/1:34,1:37:87.25:87,0,2469	0/0:27,0:27:75.24:0,75,2331	0/0:19,0:19:51.14:0,51,1514
chr10	75070378	.	A	ATCTCTCTCTCTC	5319.90	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=4.267;DP=609;FS=0.638;HRun=0;HaplotypeScore=212.6953;InbreedingCoeff=0.7456;MQ=66.86;MQ0=12;MQRankSum=-6.354;QD=15.42;ReadPosRankSum=-2.392;VQSLOD=3.6531;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:26:8.98:146,9,0	0/0:6,0:6:9.03:0,9,302	0/0:35,0:17:14.97:0,15,381	0/0:40,0:25:19.42:0,19,584	0/0:18,0:18:24.06:0,24,709	0/0:30,0:30:39.59:0,40,1183	0/0:27,0:26:24.06:0,24,753	0/0:29,0:28:0.61:0,1,526	1/1:20,0:20:15:529,15,0	1/1:25,0:23:27.07:830,27,0	1/1:15,0:13:3.01:50,3,0	1/1:18,0:18:11.44:328,11,0	1/1:14,0:12:14.54:360,15,0	0/0:23,0:23:45.14:0,45,1367	0/0:28,0:28:42.14:0,42,1350	1/1:21,0:20:14.54:262,15,0	0/0:18,0:18:30.06:0,30,828	0/0:10,0:9:2.11:0,2,375	1/1:23,0:23:21.06:672,21,0	1/1:23,0:23:5.09:122,5,0	1/1:21,0:17:3.47:27,3,0	1/1:25,0:23:5.89:176,6,0	1/1:20,0:20:11.94:167,12,0	1/1:19,0:17:3.01:104,3,0	1/1:20,0:20:6.48:79,6,0	1/1:21,0:20:35.14:1089,35,0	1/1:13,5:18:6.02:202,6,0	1/1:9,5:13:3.48:177,3,0
chr10	75070403	.	TCACACACACACACACA	T	374.12	PASS	AB=0.925;AC=15;AF=0.300;AN=50;BaseQRankSum=3.645;DP=472;FS=1.472;HRun=0;HaplotypeScore=182.4132;InbreedingCoeff=0.3581;MQ=46.14;MQ0=18;MQRankSum=-3.476;QD=2.53;ReadPosRankSum=-0.999;VQSLOD=2.8651;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:2.51:23,3,0	0/0:6,0:6:9.03:0,9,619	./.	0/0:22,0:11:0.47:0,0,1	0/0:17,0:17:15.05:0,15,771	0/0:23,0:23:36.10:0,36,1969	0/0:25,0:23:39.58:0,40,1989	0/0:22,0:21:21.06:0,21,498	0/0:12,2:14:3.43:0,3,10	0/1:14,2:14:55.53:56,0,172	1/1:10,0:10:0.47:1,0,0	0/1:14,0:15:63.24:78,0,63	1/1:9,3:11:5.48:181,5,0	0/0:22,0:22:29.93:0,30,1425	0/0:29,0:28:48.15:0,48,2576	1/1:14,0:14:3.01:95,3,0	0/0:21,0:21:42.61:0,43,2279	0/0:15,0:12:33.09:0,33,1625	0/0:13,0:13:12.04:0,12,296	1/1:17,0:17:1.25:3,1,0	0/0:15,0:10:6.02:0,6,234	1/1:18,1:17:0.47:1,0,0	./.	0/0:15,0:13:0.18:0,0,1	./.	0/1:17,0:16:63.09:63,0,540	0/0:17,0:16:8.77:0,9,303	0/0:8,0:7:6.02:0,6,362
chr10	75070613	.	G	GCC	10226.52	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=11.817;DP=651;FS=2.695;HRun=7;HaplotypeScore=105.5751;InbreedingCoeff=0.9947;MQ=82.77;MQ0=0;MQRankSum=-3.832;QD=25.63;ReadPosRankSum=0.258;VQSLOD=4.1783;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,38:40:99:1600,99,0	0/0:6,0:6:18.05:0,18,208	0/0:17,0:17:27.02:0,27,301	0/0:29,0:29:44.54:0,45,636	0/0:24,0:24:66.19:0,66,769	0/0:28,0:28:63.14:0,63,719	0/0:19,0:19:54.16:0,54,629	0/0:30,0:30:78.20:0,78,890	1/1:5,23:27:60.20:980,60,0	1/1:23,0:23:57.13:640,57,0	1/1:23,0:23:60.10:647,60,0	1/1:2,15:18:39.12:617,39,0	1/1:0,21:22:54.14:856,54,0	0/0:23,0:23:54.15:0,54,629	0/0:35,0:35:99:0,99,1143	1/1:32,0:32:90.24:1002,90,0	0/0:22,0:22:63.19:0,63,734	0/0:18,0:18:51.10:0,51,579	1/1:2,0:18:39.66:155,40,0	1/1:0,0:24:59.76:210,60,0	1/1:5,0:29:62.26:219,62,0	1/1:3,19:22:45.15:738,45,0	1/1:3,21:24:51.16:837,51,0	1/1:2,19:22:48.16:757,48,0	1/1:24,0:24:51.14:568,51,0	1/1:2,0:22:52.90:199,53,0	1/1:1,0:20:44.92:158,45,0	1/1:0,0:6:12.48:44,12,0
chr10	75070619	.	C	CCG	7625.19	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=7.216;DP=655;FS=1.739;HRun=0;HaplotypeScore=118.2263;InbreedingCoeff=0.8789;MQ=78.70;MQ0=0;MQRankSum=-1.694;QD=27.04;ReadPosRankSum=2.209;VQSLOD=6.2912;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:40:75.70:765,76,0	0/0:7,0:7:21.06:0,21,284	0/0:17,0:17:34.98:0,35,429	0/0:29,0:28:60.80:0,61,882	0/0:22,0:22:66.22:0,66,970	0/0:24,0:24:68.36:0,68,929	0/0:20,0:20:57.18:0,57,820	0/0:29,0:29:87.26:0,87,1209	1/1:26,0:25:17.07:426,17,0	1/1:4,22:26:63.19:1072,63,0	1/1:1,24:25:66.05:1100,66,0	0/1:19,0:19:10.59:233,0,11	1/1:23,0:23:50.91:438,51,0	0/0:24,0:24:66.14:0,66,892	0/0:35,0:35:99:0,102,1464	1/1:1,32:33:90.31:1640,90,0	0/0:24,0:24:71.83:0,72,978	0/0:18,0:18:51.13:0,51,723	0/0:19,0:19:39.16:0,39,158	0/0:25,0:25:50.32:0,50,156	0/0:27,0:26:53.71:0,54,167	0/1:26,0:25:1.73:297,0,2	1/1:23,0:23:28.95:362,29,0	1/1:19,0:19:29.78:315,30,0	1/1:2,20:22:54.19:977,54,0	0/0:23,0:23:46.90:0,47,178	0/0:22,0:22:44.30:0,44,175	0/0:8,0:8:15.92:0,16,71
chr10	75071961	.	T	TA	1915.65	PASS	AB=0.905;AC=35;AF=0.625;AN=56;BaseQRankSum=6.284;DP=359;FS=3.890;HRun=12;HaplotypeScore=43.6394;InbreedingCoeff=0.6524;MQ=63.97;MQ0=24;MQRankSum=-0.459;QD=9.53;ReadPosRankSum=-0.896;VQSLOD=1.9877;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:9:11.36:57,11,0	0/0:5,0:5:14.91:0,15,109	0/0:17,0:5:5.73:0,6,42	0/1:18,0:6:13.46:26,0,13	0/0:18,0:19:37.76:0,38,266	0/0:14,0:16:38.13:0,38,282	0/1:10,0:10:1.55:2,0,108	0/0:36,0:27:59.55:0,60,435	1/1:1,0:6:8.52:43,9,0	1/1:2,10:13:24.03:229,24,0	1/1:2,7:9:2.05:170,2,0	1/1:0,0:3:2.84:14,3,0	1/1:1,0:8:14.20:71,14,0	0/0:11,0:12:22.84:0,23,155	0/0:4,0:4:8.95:0,9,66	0/1:6,4:10:25.79:99,0,26	0/0:26,0:26:49.72:0,50,353	0/0:18,0:19:25.77:0,26,176	1/1:18,0:17:39.74:208,40,0	1/1:7,0:6:14.50:82,15,0	1/1:6,0:6:14.38:74,14,0	1/1:3,0:3:2.96:19,3,0	1/1:0,0:9:22.96:123,23,0	1/1:1,0:2:2.84:14,3,0	1/1:4,16:21:10.30:293,10,0	1/1:18,1:19:17.72:175,18,0	1/1:19,0:18:49.81:308,50,0	1/1:9,0:9:20.28:110,20,0
chr10	75071972	.	A	AG	2291.55	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-5.226;DP=353;FS=1.714;HRun=0;HaplotypeScore=49.9622;InbreedingCoeff=0.7108;MQ=69.37;MQ0=7;MQRankSum=-0.116;QD=30.15;ReadPosRankSum=4.252;VQSLOD=3.8067;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:23.46:0,23,156	0/0:5,0:5:15.05:0,15,208	0/0:19,0:9:13.29:0,13,165	0/0:17,0:9:2.65:0,3,106	0/0:17,0:17:47.99:0,48,589	0/0:15,0:15:19.01:0,19,505	0/0:9,0:9:22.88:0,23,278	0/0:31,0:29:81.19:0,81,973	0/0:5,0:5:6.64:0,7,29	0/0:13,0:13:1.22:0,1,50	0/0:13,0:13:5.46:0,5,157	0/0:3,0:3:2.37:0,2,8	0/0:8,0:8:16.86:0,17,96	0/0:15,0:15:38.94:0,39,432	0/0:5,0:5:15.02:0,15,166	0/0:9,0:9:0.18:0,0,98	0/0:26,0:25:51.63:0,52,688	0/0:16,0:16:32.95:0,33,389	1/1:0,15:16:44.61:556,45,0	1/1:1,7:8:17.99:216,18,0	1/1:0,5:5:15.05:199,15,0	0/0:3,0:3:2.50:0,2,9	0/0:13,0:13:29.06:0,29,182	0/0:2,0:2:2.37:0,2,8	0/0:21,0:20:2.11:0,2,93	1/1:2,15:18:48.63:547,49,0	1/1:0,19:18:51.17:668,51,0	1/1:1,9:10:21.05:279,21,0
chr10	75073053	.	A	ACC	854.34	PASS	AB=0.803;AC=7;AF=0.125;AN=56;BaseQRankSum=7.868;DP=641;FS=5.165;HRun=0;HaplotypeScore=177.4298;InbreedingCoeff=-0.1376;MQ=52.07;MQ0=7;MQRankSum=-7.761;QD=5.62;ReadPosRankSum=0.966;VQSLOD=3.0752;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:5.45:5,0,200	0/0:12,0:12:36.11:0,36,563	0/0:13,0:5:10.24:0,10,122	0/0:10,0:6:18.05:0,18,240	0/0:35,0:35:99:0,105,1686	0/0:29,0:29:84.29:0,84,1366	0/0:19,0:19:57.15:0,57,878	0/0:31,0:30:87.02:0,87,1356	0/1:24,7:31:99:185,0,312	0/0:30,0:30:84.57:0,85,1005	0/0:15,0:15:16.10:0,16,145	0/1:9,11:20:76.16:248,0,76	0/1:14,5:19:99:137,0,160	0/0:16,0:16:45.15:0,45,731	0/0:23,0:23:69.20:0,69,1071	0/0:26,0:26:51.15:0,51,519	0/0:20,0:20:48.13:0,48,746	0/0:15,0:14:39.11:0,39,588	0/0:23,0:23:66.21:0,66,1024	0/0:30,0:30:87.30:0,87,1413	0/0:14,0:14:39.11:0,39,611	0/1:16,7:23:99:168,0,104	0/1:13,11:24:99:228,0,116	0/1:10,1:11:8.17:8,0,91	0/0:22,0:22:46.90:0,47,511	0/0:33,0:33:99:0,99,1567	0/0:51,0:51:99:0,154,2458	0/0:22,0:22:66.23:0,66,1070
chr10	75073054	.	T	TAC	967.75	PASS	AB=0.863;AC=9;AF=0.161;AN=56;BaseQRankSum=13.287;DP=646;FS=0.453;HRun=0;HaplotypeScore=180.2620;InbreedingCoeff=-0.1962;MQ=51.69;MQ0=7;MQRankSum=-12.116;QD=4.46;ReadPosRankSum=3.072;VQSLOD=2.8945;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:32.21:0,32,240	0/0:11,0:11:33.11:0,33,538	0/0:11,0:3:9.03:0,9,144	0/0:10,0:6:18.06:0,18,282	0/0:35,0:35:99:0,105,1708	0/0:29,0:29:84.27:0,84,1346	0/0:19,0:19:57.13:0,57,874	0/0:31,0:30:90.03:0,90,1384	0/1:25,7:32:99:189,0,228	0/1:30,0:30:35.23:35,0,686	0/1:14,0:14:22.78:23,0,68	0/1:10,11:21:52.30:266,0,52	0/1:16,5:21:99:113,0,181	0/0:16,0:16:48.14:0,48,735	0/0:23,0:23:66.20:0,66,1028	0/1:27,0:27:75.81:76,0,295	0/0:20,0:20:48.13:0,48,738	0/0:15,0:14:39.05:0,39,587	0/0:24,0:24:66.17:0,66,999	0/0:30,0:30:90.29:0,90,1438	0/0:14,0:14:39.13:0,39,633	0/1:18,7:25:98.91:162,0,99	0/1:15,11:26:99:200,0,165	0/0:10,1:11:11.73:0,12,80	0/1:21,0:21:44.17:44,0,315	0/0:33,0:33:99:0,99,1589	0/0:51,0:51:99:0,154,2463	0/0:22,0:22:66.23:0,66,1070
chr10	75073057	.	A	ACC	1372.51	PASS	AB=0.902;AC=9;AF=0.161;AN=56;BaseQRankSum=11.643;DP=645;FS=0.449;HRun=0;HaplotypeScore=180.3308;InbreedingCoeff=-0.1967;MQ=51.53;MQ0=7;MQRankSum=-10.554;QD=6.35;ReadPosRankSum=4.837;VQSLOD=2.9076;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:35.34:0,35,278	0/0:11,0:11:33.10:0,33,515	0/0:11,0:3:9.02:0,9,118	0/0:9,0:5:14.83:0,15,183	0/0:36,0:36:99:0,108,1658	0/0:29,0:29:87.28:0,87,1390	0/0:20,0:20:57.19:0,57,922	0/0:30,0:29:87.27:0,87,1356	0/1:30,0:30:99:134,0,329	0/1:24,6:30:91.92:92,0,408	0/1:12,3:15:34.92:67,0,35	0/1:21,0:21:84.85:248,0,85	0/1:19,1:20:99:120,0,185	0/0:16,0:16:48.16:0,48,783	0/0:23,0:23:69.21:0,69,1077	0/1:18,9:27:99:230,0,116	0/0:20,0:20:48.11:0,48,731	0/0:15,0:14:36.12:0,36,577	0/0:23,0:23:64.08:0,64,984	0/0:31,0:31:93.30:0,93,1484	0/0:14,0:14:36.12:0,36,588	0/1:26,0:26:99:217,0,122	0/1:26,0:26:99:237,0,136	0/0:10,0:10:11.60:0,12,83	0/1:14,7:21:73.37:168,0,73	0/0:34,0:34:99:0,99,1557	0/0:50,0:50:99:0,147,2366	0/0:22,0:22:66.23:0,66,1070
chr10	75073058	.	T	TAC	1337.70	PASS	AB=0.902;AC=9;AF=0.161;AN=56;BaseQRankSum=12.392;DP=644;FS=1.479;HRun=0;HaplotypeScore=180.9869;InbreedingCoeff=-0.1982;MQ=50.47;MQ0=7;MQRankSum=-11.563;QD=6.16;ReadPosRankSum=5.259;VQSLOD=2.8266;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:14.99:0,15,269	0/0:11,0:11:33.10:0,33,514	0/0:11,0:3:9.02:0,9,122	0/0:8,0:4:12.04:0,12,175	0/0:38,0:38:99:0,108,1684	0/0:29,0:29:87.30:0,87,1407	0/0:20,0:20:60.17:0,60,929	0/0:29,0:28:84.28:0,84,1338	0/1:30,0:30:99:179,0,302	0/1:24,6:30:99:126,0,364	0/1:12,3:15:38.46:63,0,38	0/1:22,0:22:83.79:246,0,84	0/1:19,0:20:99:146,0,158	0/0:16,0:16:48.16:0,48,780	0/0:23,0:23:66.21:0,66,1050	0/1:18,9:27:94.34:232,0,94	0/0:20,0:20:48.11:0,48,731	0/0:15,0:14:36.12:0,36,583	0/0:22,0:22:63.20:0,63,986	0/0:30,0:30:90.29:0,90,1439	0/0:14,0:14:39.11:0,39,611	0/1:26,0:26:99:141,0,134	0/1:26,0:26:99:186,0,147	0/0:10,0:10:11.68:0,12,83	0/1:14,7:21:99:158,0,107	0/0:34,0:34:99:0,102,1588	0/0:49,0:49:99:0,147,2367	0/0:22,0:22:66.23:0,66,1070
chr10	75073073	.	A	ACCTA	6485.96	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=13.788;DP=661;FS=3.165;HRun=0;HaplotypeScore=189.6464;InbreedingCoeff=0.8514;MQ=50.14;MQ0=9;MQRankSum=-11.419;QD=24.66;ReadPosRankSum=-3.331;VQSLOD=3.9607;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:66.09:143,0,66	0/0:11,0:11:30.03:0,30,403	0/0:16,0:6:18.04:0,18,186	0/0:11,0:7:12:0,12,111	0/0:33,0:33:81.08:0,81,1086	0/0:25,0:25:57.15:0,57,871	0/0:23,0:23:44.65:0,45,418	0/0:34,0:33:53.76:0,54,470	1/1:32,0:32:74.49:920,74,0	1/1:33,0:33:71.16:785,71,0	1/1:16,0:16:17.93:279,18,0	1/1:23,0:23:62.58:962,63,0	1/1:18,0:18:35.85:546,36,0	0/0:18,0:18:45.06:0,45,564	0/0:26,0:26:60.09:0,60,764	1/1:18,9:28:44.48:798,44,0	0/0:21,0:21:32.91:0,33,352	0/0:15,0:13:26.30:0,26,269	0/0:17,0:16:24.01:0,24,276	0/0:34,0:34:81.04:0,81,1026	0/0:15,0:15:28.24:0,28,296	1/1:25,0:25:46.58:674,47,0	1/1:24,0:24:36.09:750,36,0	0/1:11,0:11:6.54:48,0,7	1/1:21,0:21:32.96:582,33,0	0/0:33,0:33:41.84:0,42,985	0/0:45,0:45:99:0,105,1254	0/0:21,0:21:27.07:0,27,402
chr10	75074483	.	C	CT	5302.31	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-9.827;DP=570;FS=1.698;HRun=1;HaplotypeScore=54.9663;InbreedingCoeff=0.9987;MQ=65.89;MQ0=0;MQRankSum=-1.988;QD=40.17;ReadPosRankSum=2.751;VQSLOD=5.4702;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:78.23:0,78,996	0/0:7,0:7:21.07:0,21,272	0/0:23,0:22:63.17:0,63,778	0/0:16,0:16:42.12:0,42,529	0/0:17,0:17:42.14:0,42,544	0/0:19,0:19:54.02:0,54,662	0/0:24,0:24:72.22:0,72,920	0/0:25,0:25:63.20:0,63,817	1/1:0,27:27:81.27:1214,81,0	0/0:13,0:13:39.13:0,39,506	0/0:18,0:18:42.14:0,42,545	1/1:2,18:20:42.14:629,42,0	1/1:1,22:23:60.20:899,60,0	0/0:25,0:25:69.18:0,69,877	0/0:21,0:21:63.20:0,63,818	0/0:23,0:23:69.22:0,69,896	0/0:18,0:18:54.18:0,54,701	0/0:11,0:11:33.11:0,33,423	0/0:20,0:20:60.18:0,60,762	0/0:23,0:23:69.20:0,69,867	0/0:25,0:25:75.24:0,75,974	1/1:0,18:18:48.16:719,48,0	1/1:0,23:23:66.12:986,66,0	1/1:1,20:21:57.19:854,57,0	0/0:16,0:16:40.68:0,41,509	0/0:29,0:29:81.24:0,81,1033	0/0:26,0:25:72.23:0,72,934	0/0:8,0:8:24.08:0,24,308
chr10	75074780	.	TAA	T	7867.06	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=10.151;DP=553;FS=0.759;HRun=12;HaplotypeScore=80.2387;InbreedingCoeff=0.9825;MQ=61.86;MQ0=6;MQRankSum=0.929;QD=22.10;ReadPosRankSum=4.987;VQSLOD=4.5754;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:28:57.09:573,57,0	0/0:10,0:10:24.08:0,24,353	0/0:13,0:6:15.04:0,15,180	0/0:9,0:6:13.19:0,13,119	0/0:22,0:23:62.55:0,63,854	0/0:17,0:16:42.13:0,42,593	0/0:11,0:11:27.05:0,27,357	0/0:34,0:34:74.28:0,74,1014	1/1:3,12:15:33.05:336,33,0	1/1:4,23:27:66.09:671,66,0	1/1:2,19:21:54.07:538,54,0	1/1:5,12:16:30.06:305,30,0	1/1:5,12:18:35.81:348,36,0	0/0:14,0:15:39.09:0,39,495	0/0:19,0:18:48.16:0,48,717	1/1:2,11:14:23.78:296,24,0	0/0:24,0:27:68.13:0,68,884	0/0:15,0:16:39.83:0,40,515	1/1:4,15:18:47.95:467,48,0	1/1:3,24:28:65.81:648,66,0	1/1:4,14:19:38.81:377,39,0	1/1:1,6:7:15.02:153,15,0	1/1:8,15:21:42.08:426,42,0	1/1:1,12:13:36.08:366,36,0	1/1:2,26:28:60.13:609,60,0	1/1:6,29:35:90.10:903,90,0	1/1:6,26:33:68.86:683,69,0	1/1:3,6:9:8.89:169,9,0
chr10	75075555	.	T	TA	2770.67	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=5.735;DP=446;FS=3.967;HRun=3;HaplotypeScore=71.5512;InbreedingCoeff=0.8521;MQ=68.30;MQ0=3;MQRankSum=-1.485;QD=15.06;ReadPosRankSum=1.664;VQSLOD=3.1869;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:20.95:0,21,151	0/0:5,0:5:11.93:0,12,99	0/0:27,1:8:23.83:0,24,191	0/0:21,0:10:2.28:0,2,33	0/0:23,0:23:62.51:0,63,537	0/0:12,0:12:26.14:0,26,223	0/0:10,0:10:20.91:0,21,179	0/0:18,0:18:44.31:0,44,379	0/0:15,0:15:22.41:0,22,166	1/1:2,16:18:47.36:421,47,0	1/1:2,10:14:31.82:251,32,0	0/0:19,0:19:31.04:0,31,242	0/1:15,0:15:9.21:9,0,148	0/0:19,0:19:50.84:0,51,448	0/0:17,0:17:44.92:0,45,376	1/1:3,11:14:8.31:74,8,0	0/0:16,0:16:47.77:0,48,418	0/0:11,0:11:27.45:0,27,265	1/1:20,0:19:50.31:375,50,0	1/1:15,0:15:43.97:308,44,0	1/1:10,0:10:23.40:162,23,0	0/0:2,0:2:3.88:0,4,27	0/0:15,0:15:25.93:0,26,184	0/0:10,0:10:6.48:0,6,62	1/1:14,6:20:51.46:443,51,0	1/1:23,0:23:55.44:378,55,0	1/1:20,0:20:55.85:327,56,0	1/1:15,0:15:40.09:235,40,0
chr10	75075585	.	TA	T	1395.57	PASS	AB=0.923;AC=13;AF=0.232;AN=56;BaseQRankSum=7.735;DP=375;FS=0.513;HRun=11;HaplotypeScore=71.5921;InbreedingCoeff=0.8318;MQ=80.85;MQ0=2;MQRankSum=-2.709;QD=14.24;ReadPosRankSum=1.673;VQSLOD=4.1221;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:30.08:0,30,320	0/0:7,0:7:15.03:0,15,154	0/0:19,0:12:15.66:0,16,130	0/0:17,1:13:13.93:0,14,85	0/0:15,1:16:39.09:0,39,407	0/0:14,0:14:34.10:0,34,380	0/0:7,0:7:12.03:0,12,128	0/0:22,0:22:51.12:0,51,538	0/0:11,0:11:18.03:0,18,185	0/0:16,0:16:39.05:0,39,393	0/0:15,0:15:33.08:0,33,345	0/0:16,0:16:21.05:0,21,224	0/0:12,0:12:18.03:0,18,183	0/0:15,0:15:33.03:0,33,338	0/0:16,0:16:39.07:0,39,405	0/0:13,0:13:15.04:0,15,160	0/1:11,1:12:15.38:15,0,255	0/0:9,0:9:21.05:0,21,224	1/1:2,14:16:24.28:321,24,0	1/1:2,11:13:32.94:271,33,0	1/1:0,9:9:17.98:148,18,0	0/0:1,0:1:3:0,3,26	0/0:14,0:14:30:0,30,299	0/0:6,0:6:8.98:0,9,84	0/0:17,0:17:33.08:0,33,346	1/1:5,14:19:12.95:313,13,0	1/1:5,13:18:41.91:342,42,0	1/1:4,7:11:20.79:172,21,0
chr10	75077433	.	G	GT	12054.86	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-13.554;DP=602;FS=1.402;HRun=5;HaplotypeScore=60.7921;InbreedingCoeff=0.9985;MQ=83.02;MQ0=0;MQRankSum=-3.052;QD=34.05;ReadPosRankSum=4.402;VQSLOD=5.0878;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:25:60.20:789,60,0	0/0:7,0:7:18.04:0,18,193	0/0:28,0:27:66.91:0,67,646	0/0:23,0:21:48.95:0,49,458	0/0:48,0:48:99:0,132,1398	0/0:29,0:28:87.20:0,87,925	0/0:15,0:15:42.10:0,42,445	0/0:31,0:31:84.18:0,84,883	1/1:1,14:15:39.13:513,39,0	1/1:1,29:30:90.27:1151,90,0	1/1:1,19:20:57.18:743,57,0	1/1:1,20:21:54.18:711,54,0	1/1:0,14:14:33.11:433,33,0	0/0:19,0:19:54.12:0,54,572	0/0:16,0:16:48.11:0,48,508	1/1:0,20:20:57.19:750,57,0	0/0:22,0:22:49.25:0,49,593	0/0:10,0:10:30.08:0,30,322	1/1:1,22:23:65.96:821,66,0	1/1:1,19:20:57.14:728,57,0	1/1:1,14:15:33.11:434,33,0	1/1:1,14:15:36.12:473,36,0	1/1:0,15:15:33.11:434,33,0	1/1:2,10:12:30.10:395,30,0	1/1:1,28:29:81.26:1066,81,0	1/1:3,23:26:75.24:979,75,0	1/1:3,32:34:87.01:1121,87,0	1/1:3,16:19:39.13:513,39,0
chr10	75077752	.	CTTT	C	2431.37	PASS	AB=0.636;AC=23;AF=0.411;AN=56;BaseQRankSum=0.763;DP=403;FS=11.994;HRun=15;HaplotypeScore=67.4869;InbreedingCoeff=0.7541;MQ=65.93;MQ0=4;MQRankSum=0.271;QD=15.39;ReadPosRankSum=5.215;VQSLOD=1.0406;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:18:33:370,33,0	0/0:5,0:5:15.05:0,15,275	0/0:18,0:10:5.93:0,6,50	0/0:15,0:4:2.98:0,3,21	0/0:27,0:33:66.73:0,67,941	0/0:19,0:20:45.04:0,45,597	0/0:5,0:4:9.03:0,9,165	0/0:27,0:26:57.12:0,57,804	1/1:1,7:8:4.05:214,4,0	1/1:6,14:21:37.64:392,38,0	1/1:2,17:19:35.87:388,36,0	1/1:2,6:8:11.99:133,12,0	1/1:2,7:12:26.85:255,27,0	0/0:11,0:11:33.04:0,33,465	0/0:11,0:11:27.04:0,27,397	1/1:3,8:12:26.98:289,27,0	0/0:19,0:19:42.05:0,42,647	0/0:22,0:22:48.12:0,48,794	0/0:4,0:8:6.73:0,7,33	0/1:9,1:20:6.22:6,0,102	0/0:2,0:4:2.49:0,2,6	1/1:3,5:8:8.95:101,9,0	1/1:3,6:8:8.90:85,9,0	1/1:0,1:1:3.01:34,3,0	1/1:4,15:20:31.48:367,31,0	0/0:8,0:18:14.20:0,14,48	0/0:4,0:13:0.36:0,0,7	0/0:1,0:12:15.45:0,15,51
chr10	75078227	.	G	GAA	2725.41	PASS	AB=0.778;AC=12;AF=0.214;AN=56;BaseQRankSum=-1.533;DP=668;FS=0.000;HRun=12;HaplotypeScore=102.6948;InbreedingCoeff=0.7911;MQ=76.43;MQ0=9;MQRankSum=0.292;QD=14.57;ReadPosRankSum=-2.029;VQSLOD=2.1946;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:31:59:0,59,635	0/0:11,0:12:19.96:0,20,200	0/0:54,0:26:4.20:0,4,182	0/1:57,0:34:23.36:23,0,173	0/0:21,0:23:41.73:0,42,472	0/0:16,0:19:32.54:0,33,328	0/0:16,0:17:44.51:0,45,382	0/0:31,0:32:56.43:0,56,552	0/0:20,0:23:48.63:0,49,438	0/0:27,0:29:44.57:0,45,547	0/0:24,0:28:65.10:0,65,551	0/0:21,0:21:44.94:0,45,406	0/0:21,0:25:40.95:0,41,413	0/0:14,0:14:35.98:0,36,331	0/0:24,0:24:47.91:0,48,427	0/0:19,0:21:46.27:0,46,370	0/0:16,0:16:32.89:0,33,297	0/0:25,0:28:70.67:0,71,578	1/1:8,11:23:11.28:396,11,0	1/1:5,14:20:41.58:533,42,0	1/1:2,9:11:12.04:168,12,0	0/0:22,0:22:56.97:0,57,518	0/0:6,0:6:18.02:0,18,167	0/0:13,0:15:33.69:0,34,268	0/0:18,0:21:41.64:0,42,419	1/1:7,18:27:11.61:643,12,0	1/1:11,20:38:22.62:830,23,0	0/1:2,8:10:0.68:307,0,1
chr10	75078880	.	CT	C	1386.80	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=9.477;DP=603;FS=0.459;HRun=11;HaplotypeScore=57.1604;InbreedingCoeff=0.8287;MQ=68.11;MQ0=2;MQRankSum=2.236;QD=13.87;ReadPosRankSum=0.663;VQSLOD=3.6852;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:59.05:0,59,778	0/1:14,0:14:12.91:13,0,277	0/0:12,0:9:3.01:0,3,32	0/0:8,0:8:17.97:0,18,169	0/0:38,2:41:46.59:0,47,855	0/0:29,0:29:60.14:0,60,633	0/0:9,0:9:18.01:0,18,181	0/0:31,0:31:81.09:0,81,841	0/0:16,0:16:39.10:0,39,416	1/1:4,18:23:55.96:449,56,0	1/1:6,15:22:19.81:301,20,0	0/0:16,0:14:36.05:0,36,366	0/0:18,0:18:42.08:0,42,433	0/0:18,0:18:42.11:0,42,447	0/0:24,0:25:54:0,54,558	1/1:1,20:21:38.65:461,39,0	0/0:34,0:34:84.11:0,84,863	0/0:19,0:18:42.07:0,42,436	0/0:21,0:20:48.07:0,48,487	0/0:17,0:17:39.10:0,39,416	0/0:20,1:21:32.49:0,32,543	0/0:19,0:19:45.11:0,45,480	0/0:20,1:21:32.42:0,32,536	0/0:16,0:15:39.09:0,39,409	1/1:2,17:20:40.99:326,41,0	0/0:31,2:33:28.89:0,29,703	0/0:20,0:20:42.11:0,42,447	0/0:19,0:19:48.11:0,48,504
chr10	75083889	.	TG	T	12074.93	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=18.393;DP=742;FS=1.180;HRun=1;HaplotypeScore=110.3570;InbreedingCoeff=0.9977;MQ=92.25;MQ0=0;MQRankSum=-4.095;QD=39.85;ReadPosRankSum=4.368;VQSLOD=4.6826;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,49:49:99:1844,135,0	0/0:5,0:5:15.05:0,15,237	0/0:34,0:34:99:0,102,1625	0/0:29,0:29:81.26:0,81,1258	0/0:20,0:20:60.20:0,60,959	0/0:22,0:22:66.22:0,66,1050	0/0:20,0:20:60.19:0,60,933	0/0:29,0:29:87.28:0,87,1348	1/1:2,30:32:96.30:1325,96,0	1/1:0,28:28:84.26:1156,84,0	1/1:1,19:20:60.19:824,60,0	1/1:1,26:27:78.25:1076,78,0	1/1:0,20:20:60.16:817,60,0	0/0:19,0:19:54.18:0,54,863	0/0:31,0:31:93.30:0,93,1463	1/1:0,22:22:66.22:923,66,0	0/0:20,0:20:60.20:0,60,953	0/0:11,0:11:33.11:0,33,527	0/0:23,0:23:66.21:0,66,1033	0/0:34,0:34:99:0,102,1630	0/0:43,0:43:99:0,129,2027	1/1:0,25:25:72.24:1007,72,0	1/1:0,34:34:93.29:1301,93,0	1/1:2,21:23:66.22:922,66,0	1/1:0,23:23:63.21:881,63,0	0/0:33,1:34:60.37:0,60,1541	0/0:41,0:41:99:0,123,1957	0/0:24,0:24:72.25:0,72,1136
chr10	75083978	.	T	TG	11540.28	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=11.288;DP=619;FS=3.920;HRun=1;HaplotypeScore=87.9081;InbreedingCoeff=0.9940;MQ=79.68;MQ0=0;MQRankSum=-2.623;QD=44.73;ReadPosRankSum=2.661;VQSLOD=4.4388;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,48:48:99:2206,138,0	0/0:9,0:9:27.09:0,27,378	0/0:22,0:20:60.19:0,60,808	0/0:22,0:22:52.98:0,53,702	0/0:20,0:20:60.16:0,60,815	0/0:18,0:18:54.17:0,54,735	0/0:20,0:20:57.17:0,57,777	0/0:32,0:32:93.31:0,93,1299	1/1:1,32:33:96.33:1535,96,0	1/1:6,20:26:75.25:1164,75,0	1/1:2,12:14:39.12:600,39,0	1/1:3,25:28:84.27:1308,84,0	1/1:1,20:21:60.20:957,60,0	0/0:13,0:13:39.13:0,39,545	0/0:27,0:27:81.27:0,81,1133	1/1:1,22:23:63.20:983,63,0	0/0:23,0:23:69.22:0,69,945	0/0:9,0:9:24.08:0,24,335	0/0:14,0:14:42.14:0,42,586	0/0:18,0:18:51.17:0,51,713	0/0:43,0:43:99:0,126,1757	1/1:0,15:15:45.15:719,45,0	1/1:1,12:13:11:502,11,0	1/1:1,23:24:65.59:1013,66,0	1/1:1,12:13:36.11:552,36,0	0/0:21,0:21:63.21:0,63,880	0/0:35,0:35:99:0,105,1447	0/0:15,0:15:45.15:0,45,629
chr10	75085948	.	GATAT	G	2945.15	PASS	AC=32;AF=0.593;AN=54;BaseQRankSum=7.176;DP=281;FS=0.000;HRun=0;HaplotypeScore=56.5373;InbreedingCoeff=0.7336;MQ=71.54;MQ0=4;MQRankSum=-2.674;QD=21.82;ReadPosRankSum=4.560;VQSLOD=3.0823;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:13:6.01:56,6,0	0/0:3,0:3:6.01:0,6,100	0/0:11,0:7:5.66:0,6,74	0/0:37,0:12:11.88:0,12,85	0/0:8,0:8:21.05:0,21,450	0/0:7,0:8:17.85:0,18,365	0/0:4,0:4:6:0,6,99	0/0:25,0:27:62.76:0,63,1234	1/1:1,0:7:3:28,3,0	1/1:1,5:6:15.02:205,15,0	1/1:1,5:6:12.04:206,12,0	1/1:2,0:4:3:28,3,0	1/1:2,0:9:3:28,3,0	0/0:3,0:3:9.02:0,9,176	0/0:3,0:3:9.02:0,9,165	1/1:1,3:3:6.02:103,6,0	0/0:21,0:22:56.97:0,57,1291	0/0:17,0:18:47.95:0,48,1144	1/1:1,13:13:30.03:454,30,0	1/1:1,1:2:3.01:52,3,0	1/1:0,4:3:3.01:52,3,0	1/1:0,0:6:9.01:84,9,0	1/1:2,0:6:3:28,3,0	./.	1/1:1,14:15:27.09:440,27,0	1/1:1,10:11:30.04:451,30,0	1/1:2,12:14:18.06:309,18,0	1/1:0,14:14:36.12:618,36,0
chr10	75086940	.	GGGTATTT	G	6376.97	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.913;DP=605;FS=0.920;HRun=0;HaplotypeScore=148.4130;InbreedingCoeff=0.9872;MQ=68.48;MQ0=0;MQRankSum=-13.544;QD=65.07;ReadPosRankSum=1.308;VQSLOD=4.6933;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,5337	0/0:3,0:3:9.03:0,9,369	0/0:28,0:26:68.61:0,69,2225	0/0:32,0:29:61.08:0,61,2722	0/0:14,0:14:39.13:0,39,1549	0/0:24,0:24:69.24:0,69,2756	0/0:21,0:21:60.21:0,60,2430	0/0:31,0:30:87.29:0,87,3206	0/0:20,0:20:60.21:0,60,2384	0/0:20,0:20:57.20:0,57,2295	0/0:13,0:13:39.13:0,39,1517	0/0:18,0:18:51.17:0,51,1873	0/0:16,0:16:48.16:0,48,1891	0/0:20,0:20:57.17:0,57,2130	0/0:23,0:23:66.22:0,66,2534	0/0:27,0:27:81.28:0,81,3275	0/0:35,0:35:99:0,102,4004	0/0:29,0:29:79.14:0,79,3091	1/1:1,10:11:30.10:808,30,0	1/1:2,15:17:45.15:1180,45,0	1/1:4,14:18:30.10:782,30,0	0/0:21,0:21:63.19:0,63,2350	0/0:18,0:18:54.17:0,54,2114	0/0:34,0:34:99:0,102,3877	0/0:15,0:15:45.15:0,45,1843	1/1:2,12:14:36.06:947,36,0	1/1:3,26:29:78.27:2095,78,0	1/1:2,7:9:21.07:566,21,0
chr10	75089715	.	TA	T	1808.59	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.908;DP=503;FS=11.254;HRun=10;HaplotypeScore=65.0943;InbreedingCoeff=0.9646;MQ=71.04;MQ0=2;MQRankSum=0.092;QD=19.24;ReadPosRankSum=0.182;VQSLOD=3.7720;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:49.85:0,50,535	0/0:7,0:7:18.05:0,18,199	0/0:23,0:13:6.46:0,6,92	0/0:25,2:14:14.97:0,15,166	0/0:24,0:24:45.59:0,46,499	0/0:14,0:13:36.07:0,36,386	0/0:18,1:20:15.88:0,16,378	0/0:29,1:30:43.12:0,43,697	0/0:16,0:17:41.91:0,42,437	0/0:25,1:26:42.90:0,43,658	0/0:17,0:18:50.87:0,51,514	0/0:16,0:16:36.08:0,36,389	0/0:8,0:8:21.06:0,21,232	0/0:15,0:15:26.70:0,27,298	0/0:20,0:20:39.11:0,39,431	0/0:17,1:18:18.95:0,19,403	0/0:13,1:14:18.46:0,18,261	0/0:17,0:17:39.11:0,39,431	1/1:3,7:10:23.99:206,24,0	1/1:0,22:22:62.98:547,63,0	1/1:3,9:12:26.96:230,27,0	0/0:25,0:25:54.60:0,55,590	0/0:13,0:13:21.06:0,21,232	0/0:16,1:16:17.87:0,18,377	0/0:16,0:16:29.09:0,29,291	1/1:7,15:23:49.96:414,50,0	1/1:4,17:21:50.98:443,51,0	1/1:0,6:6:18:156,18,0
chr10	75089736	.	AAGAG	A	756.07	PASS	AB=0.926;AC=12;AF=0.231;AN=52;BaseQRankSum=-2.298;DP=548;FS=8.639;HRun=0;HaplotypeScore=111.1936;InbreedingCoeff=0.4856;MQ=52.43;MQ0=20;MQRankSum=0.441;QD=4.70;ReadPosRankSum=-0.140;VQSLOD=1.6675;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:23.80:0,24,251	0/0:9,0:9:5.99:0,6,50	./.	./.	0/0:22,0:21:17.63:0,18,244	0/0:22,0:21:21.23:0,21,265	0/0:17,0:17:9.02:0,9,146	0/0:23,0:22:8.96:0,9,94	0/1:18,0:20:15.43:15,0,228	1/1:27,4:31:18.40:280,18,0	1/1:23,0:22:7.71:132,8,0	0/0:17,0:19:26.91:0,27,305	0/1:10,0:10:5.79:6,0,148	0/0:14,0:14:14.68:0,15,207	0/0:18,0:18:20.85:0,21,360	1/1:13,3:15:14.07:242,14,0	0/0:15,0:15:16.61:0,17,359	0/1:11,1:19:32.35:32,0,97	0/0:17,0:16:18.47:0,18,176	0/0:23,0:22:14.11:0,14,91	0/0:15,0:13:17.66:0,18,195	0/0:30,0:30:27.37:0,27,327	0/0:15,0:16:8.90:0,9,169	0/0:15,0:14:21.01:0,21,291	1/1:7,11:17:11.63:182,12,0	0/1:24,0:24:25.02:25,0,126	0/0:29,0:28:24.90:0,25,304	0/0:8,0:7:0:0,0,0
chr10	75089781	.	G	GGA	3767.69	PASS	AB=0.987;AC=13;AF=0.232;AN=56;BaseQRankSum=2.632;DP=557;FS=0.000;HRun=0;HaplotypeScore=94.0904;InbreedingCoeff=0.6330;MQ=52.74;MQ0=21;MQRankSum=-3.148;QD=21.91;ReadPosRankSum=-1.868;VQSLOD=3.6217;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:50.57:0,51,596	0/1:3,0:3:19.15:19,0,35	0/0:21,0:9:21.80:0,22,228	0/0:21,0:8:6.15:0,6,155	0/0:20,0:19:51.16:0,51,665	0/0:29,0:29:47.29:0,47,804	0/0:15,0:14:36.11:0,36,475	0/0:27,0:27:48.07:0,48,558	0/0:24,0:22:17.73:0,18,469	0/0:21,0:21:62.48:0,62,784	0/0:13,0:13:20.77:0,21,270	0/0:13,0:13:1.27:0,1,340	0/0:17,0:17:12.71:0,13,298	0/0:18,0:18:35.98:0,36,478	0/0:17,0:16:42.14:0,42,571	0/0:20,0:19:51.69:0,52,634	0/0:17,0:16:39.06:0,39,499	0/0:14,0:14:24.03:0,24,287	1/1:26,1:24:53.82:732,54,0	1/1:33,1:34:54.13:793,54,0	1/1:24,1:21:8.15:485,8,0	0/0:22,0:21:36.06:0,36,447	0/0:15,0:14:29.44:0,29,354	0/1:18,0:16:8.59:9,0,368	0/0:17,0:16:24.06:0,24,291	0/1:23,0:24:66.62:570,0,67	1/1:32,1:34:67.24:959,67,0	1/1:5,1:5:15.04:202,15,0
chr10	75089853	.	C	CA	4106.87	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-7.265;DP=622;FS=14.739;HRun=7;HaplotypeScore=67.3676;InbreedingCoeff=0.9971;MQ=82.84;MQ0=0;MQRankSum=-2.659;QD=30.20;ReadPosRankSum=1.763;VQSLOD=2.8124;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:72.11:0,72,695	0/0:6,0:6:18.03:0,18,174	0/0:17,0:17:35.77:0,36,321	0/0:22,0:22:59.98:0,60,543	0/0:34,0:34:93.14:0,93,898	0/0:31,0:31:81.12:0,81,782	0/0:23,0:23:63.08:0,63,602	0/0:30,0:30:63.09:0,63,608	0/0:32,0:32:81.10:0,81,776	0/0:29,0:29:84.13:0,84,807	0/0:18,0:18:51.08:0,51,493	0/0:19,0:19:48.07:0,48,464	0/0:24,0:24:69.11:0,69,666	0/0:16,0:16:42.07:0,42,406	0/0:29,0:29:69.11:0,69,666	0/0:18,0:18:39.04:0,39,370	0/0:22,0:22:63.10:0,63,608	0/0:10,0:10:27.04:0,27,261	1/1:3,17:20:51.13:593,51,0	1/1:3,18:21:54.17:652,54,0	1/1:5,17:22:48.15:580,48,0	0/0:23,0:23:60.09:0,60,579	0/0:22,0:22:60.09:0,60,579	0/0:20,0:20:57.03:0,57,535	0/0:10,0:10:27.03:0,27,256	1/1:3,28:31:84.26:1013,84,0	1/1:2,30:31:84.26:1015,84,0	1/1:2,8:10:21.06:254,21,0
chr10	75090375	.	A	AT	1950.07	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-8.081;DP=533;FS=0.500;HRun=9;HaplotypeScore=58.7147;InbreedingCoeff=0.9812;MQ=60.92;MQ0=3;MQRankSum=-1.324;QD=21.91;ReadPosRankSum=-0.958;VQSLOD=4.0391;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:77:0,77,655	0/0:12,0:12:23.99:0,24,208	0/0:19,0:12:20.65:0,21,147	0/0:13,0:9:11.92:0,12,86	0/0:27,0:27:71.98:0,72,625	0/0:18,0:18:47.99:0,48,416	0/0:19,0:19:50.98:0,51,443	0/0:25,0:25:53.64:0,54,451	0/0:19,0:19:26.88:0,27,234	0/0:30,0:30:68.92:0,69,590	0/0:21,0:21:44.84:0,45,390	0/0:19,0:19:44.94:0,45,380	0/0:17,0:17:35.86:0,36,309	0/0:14,0:14:32.99:0,33,286	0/0:19,0:19:38.98:0,39,338	0/0:15,0:15:38.99:0,39,339	0/0:34,0:34:89.96:0,90,777	0/0:20,0:20:53.97:0,54,463	1/1:2,9:11:24.06:265,24,0	1/1:0,14:14:39:402,39,0	1/1:4,12:16:27.07:299,27,0	0/0:18,0:18:35.96:0,36,309	0/0:17,0:17:35.98:0,36,312	0/0:18,0:18:32.97:0,33,286	0/0:17,0:17:41.98:0,42,364	1/1:4,16:20:25.07:499,25,0	1/1:4,11:15:30.08:332,30,0	1/1:1,12:13:10.04:339,10,0
chr10	75091645	.	C	CAT	8170.20	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-13.850;DP=783;FS=0.331;HRun=0;HaplotypeScore=88.5130;InbreedingCoeff=0.9644;MQ=63.84;MQ0=3;MQRankSum=0.104;QD=48.92;ReadPosRankSum=0.842;VQSLOD=5.5377;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,153,2404	0/0:8,0:8:24.08:0,24,389	0/0:20,0:19:46.84:0,47,607	0/0:17,0:14:3.23:0,3,266	0/0:25,0:25:69.20:0,69,1065	0/0:19,0:19:54.17:0,54,852	0/0:37,0:37:99:0,108,1454	0/0:24,0:24:69.03:0,69,979	0/0:24,0:24:72.20:0,72,1134	0/0:35,0:35:99:0,105,1554	0/0:21,0:21:54.17:0,54,852	0/0:30,0:30:90.29:0,90,1437	0/0:24,0:24:66.18:0,66,1034	0/0:34,0:34:99:0,102,1639	0/0:33,0:33:93.26:0,93,1453	0/0:26,0:26:78.20:0,78,1187	0/0:45,0:45:99:0,129,1973	0/0:41,0:41:99:0,111,1686	1/1:1,26:27:75.06:1046,75,0	1/1:1,25:26:66.23:1339,66,0	1/1:0,31:30:69.24:1399,69,0	0/0:31,0:31:90.14:0,90,1260	0/0:25,0:24:75.18:0,75,1138	0/0:22,0:22:63.09:0,63,936	0/0:23,0:23:69.18:0,69,1064	1/1:3,43:46:34.95:2384,35,0	1/1:0,29:29:81.28:1638,81,0	1/1:0,6:6:18.06:364,18,0
chr10	75093727	.	GT	G	3871.76	PASS	AB=0.777;AC=34;AF=0.607;AN=56;BaseQRankSum=8.051;DP=509;FS=0.861;HRun=13;HaplotypeScore=57.3942;InbreedingCoeff=0.7505;MQ=78.84;MQ0=0;MQRankSum=2.669;QD=12.74;ReadPosRankSum=2.385;VQSLOD=3.9062;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,19:26:28.17:309,28,0	0/0:5,0:5:3:0,3,29	0/0:26,0:17:18.40:0,18,149	0/1:20,1:17:27.34:27,0,28	0/0:25,0:25:65.39:0,65,591	0/0:18,0:19:13.25:0,13,308	0/0:9,0:9:20.07:0,20,181	0/0:26,0:26:36.98:0,37,360	1/1:5,10:15:29.82:219,30,0	1/1:6,7:15:21.94:143,22,0	1/1:1,19:20:56.67:416,57,0	1/1:1,18:20:40.80:290,41,0	1/1:4,11:15:20.86:153,21,0	0/0:17,0:17:27.04:0,27,262	0/0:22,0:22:41.66:0,42,452	1/1:4,11:15:26.83:197,27,0	0/0:25,0:25:60.72:0,61,567	0/0:27,1:29:43.66:0,44,535	1/1:9,20:29:1.42:327,1,0	1/1:8,18:26:43.85:307,44,0	1/1:1,3:4:2.98:22,3,0	1/1:3,7:10:20.86:153,21,0	1/1:1,17:18:44.74:328,45,0	1/1:3,6:9:19.91:137,20,0	1/1:3,14:19:33.89:230,34,0	1/1:1,17:20:33.62:367,34,0	1/1:7,12:19:6.65:212,7,0	0/1:1,2:3:20.22:35,0,20
chr10	75094076	.	CCTCTCTCTCTCT	C	1398.04	PASS	AB=0.740;AC=14;AF=0.250;AN=56;BaseQRankSum=4.645;DP=361;FS=0.000;HRun=0;HaplotypeScore=141.0454;InbreedingCoeff=0.4340;MQ=62.25;MQ0=9;MQRankSum=-4.403;QD=13.31;ReadPosRankSum=1.226;VQSLOD=2.5784;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:22:32.92:0,33,329	0/0:4,0:4:9.03:0,9,508	0/0:22,0:13:6:0,6,94	0/0:28,0:18:7.30:0,7,28	0/0:8,0:15:17.98:0,18,512	0/0:10,0:14:21.07:0,21,823	0/0:5,0:7:17.94:0,18,410	0/0:23,0:22:34.80:0,35,572	1/1:5,0:9:5.50:51,6,0	1/1:6,7:13:23.41:644,23,0	1/1:8,10:17:10.03:517,10,0	0/1:3,0:6:0.31:0,0,14	0/1:5,0:7:9.49:25,0,9	0/0:4,0:5:12.04:0,12,430	0/0:5,0:7:14.90:0,15,260	1/1:2,5:7:3.01:105,3,0	0/0:14,0:17:29.94:0,30,829	0/0:8,0:13:30:0,30,734	0/0:21,0:21:29.81:0,30,344	0/0:13,0:11:9.02:0,9,138	0/0:14,0:14:9:0,9,159	0/1:4,0:6:1.47:1,0,15	0/1:13,0:17:24.02:24,0,134	0/1:6,0:8:1.54:2,0,14	0/1:7,5:12:0.73:179,0,1	0/0:19,0:18:35.97:0,36,602	0/0:11,0:11:24.03:0,24,335	0/0:1,0:1:3:0,3,25
chr10	75094111	.	CTT	C	1181.48	PASS	AB=0.970;AC=27;AF=0.482;AN=56;BaseQRankSum=0.131;DP=350;FS=3.960;HRun=3;HaplotypeScore=91.3581;InbreedingCoeff=0.0244;MQ=55.84;MQ0=15;MQRankSum=-0.677;QD=4.73;ReadPosRankSum=-0.405;VQSLOD=-0.4081;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:13,1:14:3.41:3,0,94	0/0:6,0:6:17.95:0,18,199	0/0:35,0:15:1.59:0,2,100	0/1:41,0:11:2.44:2,0,63	0/1:13,1:14:17.40:17,0,102	0/1:13,0:13:20.43:20,0,173	0/1:8,0:8:7.84:8,0,59	0/0:11,0:9:14.69:0,15,216	0/0:7,0:6:3.37:0,3,29	0/1:13,0:13:17.38:17,0,94	0/0:16,0:15:19.40:0,19,114	1/1:4,0:4:2.51:23,3,0	0/1:7,0:7:10.51:11,0,60	0/1:7,1:8:37.79:38,0,66	0/0:5,0:5:5.70:0,6,29	0/0:6,0:6:1.55:0,2,4	0/1:11,1:12:9.54:79,0,10	0/1:14,1:15:59.76:60,0,98	1/1:19,1:19:51.66:348,52,0	1/1:7,1:7:8.68:65,9,0	1/1:13,0:13:5.88:50,6,0	0/0:14,0:14:5.81:0,6,173	0/1:15,0:14:39.28:39,0,83	0/1:5,0:4:2.71:16,0,3	0/1:9,0:8:0.24:0,0,49	1/1:14,3:17:22.70:337,23,0	1/1:7,4:10:20.92:174,21,0	1/1:3,0:3:3.83:37,4,0
chr10	75094122	.	TCTCA	T	824.60	PASS	AB=0.961;AC=10;AF=0.179;AN=56;BaseQRankSum=3.271;DP=358;FS=0.000;HRun=0;HaplotypeScore=100.0725;InbreedingCoeff=0.4819;MQ=57.80;MQ0=14;MQRankSum=-6.542;QD=12.69;ReadPosRankSum=0.892;VQSLOD=2.6439;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:29.91:0,30,416	0/0:8,0:8:21.07:0,21,450	0/0:45,0:18:28.60:0,29,323	0/0:49,0:13:9.68:0,10,368	0/0:18,0:17:42.10:0,42,817	0/0:13,0:13:36.11:0,36,812	0/0:8,0:8:18.03:0,18,379	0/0:18,0:16:45.07:0,45,740	0/0:7,0:7:7.46:0,7,105	0/0:13,0:13:17.57:0,18,404	0/0:16,0:15:34.53:0,35,404	0/1:4,0:4:15.77:17,0,16	0/0:7,0:7:14.53:0,15,215	0/0:9,0:9:20.03:0,20,402	0/0:4,0:4:9.03:0,9,156	0/0:5,0:5:2.90:0,3,16	0/0:8,0:8:24:0,24,422	0/0:14,0:14:33.10:0,33,699	1/1:19,0:19:47.63:374,48,0	1/1:4,1:4:5.69:50,6,0	0/1:8,0:8:0:0,0,0	0/0:13,0:13:28.90:0,29,563	0/0:11,0:10:23.79:0,24,354	0/0:6,0:5:5.86:0,6,35	0/0:9,0:9:9.86:0,10,207	0/1:13,3:16:39.29:273,0,39	1/1:6,4:9:23.83:247,24,0	0/1:3,0:3:12.98:13,0,21
chr10	75094132	.	GTTTTT	G	1343.27	PASS	AB=0.685;AC=10;AF=0.179;AN=56;BaseQRankSum=2.303;DP=447;FS=1.347;HRun=14;HaplotypeScore=121.8837;InbreedingCoeff=0.6861;MQ=54.79;MQ0=13;MQRankSum=-3.450;QD=18.66;ReadPosRankSum=2.106;VQSLOD=1.5092;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:16:42.06:0,42,440	0/0:6,0:7:17.42:0,17,372	0/0:54,0:23:23.19:0,23,159	0/0:62,0:15:29.20:0,29,298	0/0:21,0:22:51.02:0,51,938	0/0:16,0:17:45.12:0,45,856	0/0:7,0:8:18.06:0,18,437	0/0:23,0:25:64.11:0,64,1358	0/0:4,0:6:14.56:0,15,101	0/0:16,0:17:32.93:0,33,707	0/0:17,0:19:48.08:0,48,845	0/0:5,0:6:14.30:0,14,101	0/0:3,0:7:17.15:0,17,105	0/0:9,0:10:21.05:0,21,419	0/0:5,0:6:11.85:0,12,230	0/0:8,0:8:15.05:0,15,364	0/0:14,0:15:29.98:0,30,566	0/0:12,0:14:27.07:0,27,572	1/1:8,15:23:42.27:489,42,0	1/1:5,2:7:17.71:175,18,0	1/1:2,7:9:4.76:51,5,0	0/0:3,0:14:37.15:0,37,247	0/0:6,0:13:33.98:0,34,237	0/0:5,0:8:13.97:0,14,68	0/0:11,0:11:24.07:0,24,525	0/1:7,11:18:83.80:497,0,84	1/1:5,7:11:14.71:248,15,0	0/1:2,1:3:36.41:44,0,36
chr10	75094176	.	TC	T	166.11	PASS	AB=0.905;AC=11;AF=0.196;AN=56;BaseQRankSum=-1.445;DP=354;FS=0.000;HRun=3;HaplotypeScore=50.3848;InbreedingCoeff=0.6665;MQ=42.73;MQ0=36;MQRankSum=-2.143;QD=2.97;ReadPosRankSum=-0.563;VQSLOD=-0.7035;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:17.96:0,18,86	0/0:5,0:5:8.93:0,9,74	0/0:27,0:3:3:0,3,25	0/0:30,0:9:3.87:0,4,10	0/0:17,0:14:20.67:0,21,139	0/0:11,0:11:27.64:0,28,254	0/0:20,0:17:28.92:0,29,255	0/0:21,0:21:50.13:0,50,371	0/0:8,0:8:16.41:0,16,96	0/0:11,0:10:23.90:0,24,205	0/0:11,0:9:11.59:0,12,84	0/0:4,0:4:9.35:0,9,61	0/0:6,0:5:8.78:0,9,58	0/0:11,0:10:23.22:0,23,182	0/0:8,0:8:20.85:0,21,185	0/0:9,0:7:11.52:0,12,115	0/0:21,0:18:40.19:0,40,356	0/0:13,0:10:23.45:0,23,223	1/1:10,1:8:8.73:95,9,0	0/1:17,2:18:1.03:30,0,1	1/1:6,0:3:3:26,3,0	0/0:8,0:8:8.38:0,8,45	0/0:13,0:11:9.53:0,10,42	0/0:13,0:11:8.41:0,8,54	0/0:11,0:10:17.27:0,17,160	1/1:10,1:10:6.26:76,6,0	1/1:7,0:7:9.82:66,10,0	1/1:2,0:1:2.97:20,3,0
chr10	75094445	.	AT	A	2713.52	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=3.865;DP=616;FS=4.074;HRun=3;HaplotypeScore=132.0236;InbreedingCoeff=0.9994;MQ=86.61;MQ0=0;MQRankSum=-7.265;QD=30.84;ReadPosRankSum=0.607;VQSLOD=2.7540;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,123,1706	0/0:9,0:9:27.09:0,27,388	0/0:24,0:24:69.21:0,69,963	0/0:21,0:21:58.71:0,59,793	0/0:25,0:23:63.20:0,63,881	0/0:23,0:23:66.22:0,66,948	0/0:22,0:22:60.15:0,60,823	0/0:33,0:33:93.31:0,93,1331	0/0:23,0:23:66.18:0,66,895	0/0:24,0:24:69.19:0,69,970	0/0:27,0:27:78.25:0,78,1099	0/0:23,0:23:57.18:0,57,804	0/0:15,0:15:39.13:0,39,561	0/0:20,0:20:54.18:0,54,777	0/0:27,0:27:78.25:0,78,1090	0/0:22,0:22:60.19:0,60,845	0/0:42,0:42:99:0,108,1552	0/0:10,0:10:27.07:0,27,367	1/1:1,14:15:42.13:520,42,0	1/1:1,14:15:45.13:544,45,0	1/1:4,27:31:75.22:912,75,0	0/0:20,0:20:57.14:0,57,763	0/0:15,0:15:39.12:0,39,545	0/0:36,0:36:93.26:0,93,1296	0/0:20,0:20:54.18:0,54,776	1/1:1,10:11:30.05:354,30,0	1/1:0,16:16:45.14:557,45,0	./.
chr10	75094481	.	G	GGTA	36243.17	PASS	AC=54;AF=0.964;AN=56;BaseQRankSum=-5.328;DP=669;FS=1.989;HRun=0;HaplotypeScore=96.0100;InbreedingCoeff=0.9166;MQ=78.80;MQ0=0;MQRankSum=-5.700;QD=55.76;ReadPosRankSum=4.371;VQSLOD=6.9399;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,47:52:99:2823,122,0	1/1:2,5:7:12.04:276,12,0	1/1:3,15:19:48.14:1041,48,0	0/0:19,0:19:54.18:0,54,834	1/1:0,22:21:54.19:1243,54,0	1/1:1,23:24:66.23:1522,66,0	1/1:2,26:29:71.32:1658,71,0	1/1:7,16:26:63.19:1341,63,0	1/1:0,23:24:66.23:1519,66,0	1/1:2,33:36:99:2221,102,0	1/1:3,24:28:69.24:1578,69,0	1/1:3,19:22:54.18:1197,54,0	1/1:3,15:18:48.16:1092,48,0	1/1:1,17:18:51.18:1175,51,0	1/1:3,27:32:78.27:1796,78,0	1/1:3,25:30:78.27:1797,78,0	1/1:2,31:33:75.26:1729,75,0	1/1:0,14:14:36.12:830,36,0	1/1:6,21:24:63.22:1451,63,0	1/1:5,11:16:42.10:862,42,0	1/1:6,29:36:68.31:1586,68,0	1/1:2,20:23:51.17:1165,51,0	1/1:0,12:12:24.08:553,24,0	1/1:2,31:34:75.26:1713,75,0	1/1:0,17:19:45.15:1037,45,0	1/1:6,21:28:81.23:1727,81,0	1/1:2,15:17:48.16:1104,48,0	1/1:0,3:3:9.03:207,9,0
chr10	75094483	.	T	TA	6659.41	PASS	AB=0.979;AC=49;AF=0.875;AN=56;BaseQRankSum=6.281;DP=655;FS=0.538;HRun=0;HaplotypeScore=173.1757;InbreedingCoeff=0.1415;MQ=79.33;MQ0=0;MQRankSum=-5.121;QD=10.49;ReadPosRankSum=10.111;VQSLOD=4.0788;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:47,0:47:99:572,115,0	0/1:5,0:5:26.50:42,0,26	0/1:18,0:18:10.97:168,0,11	0/0:20,0:20:54.16:0,54,706	1/1:23,0:21:51.13:255,51,0	1/1:23,0:23:62.50:312,62,0	1/1:29,0:29:30.13:299,30,0	0/1:25,0:25:65.67:210,0,66	1/1:26,0:26:40.55:285,41,0	1/1:33,1:34:65.17:511,65,0	1/1:27,0:28:22.33:273,22,0	1/1:21,0:21:31.94:209,32,0	1/1:17,0:17:42.29:213,42,0	1/1:18,0:18:48.29:241,48,0	1/1:28,0:28:73.82:368,74,0	1/1:30,0:30:14.10:303,14,0	1/1:32,0:32:49.23:318,49,0	1/1:14,0:14:34.09:170,34,0	1/1:27,0:24:2.11:234,2,0	0/1:15,2:17:28.61:166,0,29	1/1:35,1:36:5.80:260,6,0	1/1:21,0:22:9.96:201,10,0	1/1:13,0:13:22.73:113,23,0	1/1:34,0:34:12.80:276,13,0	1/1:21,0:21:22.68:190,23,0	0/1:26,0:26:4.23:240,0,4	1/1:17,1:18:7.68:188,8,0	1/1:3,0:3:8.52:43,9,0
chr10	75095055	.	GA	G	1795.26	PASS	AB=0.816;AC=13;AF=0.232;AN=56;BaseQRankSum=6.249;DP=553;FS=0.421;HRun=11;HaplotypeScore=57.8699;InbreedingCoeff=0.5929;MQ=72.93;MQ0=0;MQRankSum=-0.592;QD=11.36;ReadPosRankSum=1.027;VQSLOD=2.9926;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:32:53.49:0,53,748	0/1:10,1:11:14.63:15,0,181	0/0:17,1:17:3.55:0,4,159	0/1:16,2:16:9.91:10,0,288	0/0:16,2:18:11.43:0,11,313	0/0:29,0:32:58.99:0,59,609	0/0:17,0:17:39.09:0,39,409	0/0:28,0:29:53.20:0,53,601	0/0:24,0:24:54.11:0,54,562	0/0:30,0:30:60.15:0,60,635	0/0:11,0:12:20.91:0,21,200	0/0:14,0:14:33.51:0,34,335	0/0:14,0:14:36.06:0,36,363	0/0:14,0:14:36.07:0,36,370	0/0:13,0:14:32.20:0,32,359	0/0:15,0:15:39.09:0,39,409	0/0:20,1:20:18.35:0,18,393	0/0:17,1:18:26.46:0,26,475	1/1:6,20:27:32.93:464,33,0	1/1:2,22:23:56.92:468,57,0	1/1:5,14:20:37.98:301,38,0	0/0:11,2:13:5.91:0,6,264	0/0:14,1:15:2.42:0,2,230	0/0:27,0:28:66.03:0,66,686	0/0:15,0:17:29.74:0,30,284	0/1:10,14:24:21.63:251,0,22	1/1:6,21:27:27.91:436,28,0	1/1:2,5:7:2.98:25,3,0
chr10	75096351	.	GGAGA	G	338.14	PASS	AB=1.000;AC=15;AF=0.357;AN=42;BaseQRankSum=1.476;DP=316;FS=5.079;HRun=0;HaplotypeScore=47.4745;InbreedingCoeff=0.5012;MQ=37.63;MQ0=47;MQRankSum=0.202;QD=3.49;ReadPosRankSum=0.960;VQSLOD=1.0053;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,2:16:17.10:119,17,0	0/0:2,0:2:6.02:0,6,113	./.	0/0:30,0:2:3.01:0,3,39	0/0:11,0:8:3.15:0,3,11	0/0:15,0:12:21.06:0,21,365	0/0:26,0:18:17.68:0,18,248	0/0:15,0:6:1.25:0,1,3	1/1:6,6:11:3.01:47,3,0	./.	1/1:9,0:8:3.01:38,3,0	./.	1/1:7,1:5:2.88:47,3,0	0/0:9,0:8:7.27:0,7,143	0/1:9,0:6:16.89:17,0,137	0/0:4,0:3:6.02:0,6,117	0/0:17,0:10:11.83:0,12,192	0/0:15,0:11:11.56:0,12,167	0/0:4,0:4:6.49:0,6,85	./.	0/0:16,0:15:9.96:0,10,120	1/1:4,2:4:2.74:12,3,0	1/1:9,2:10:6.02:73,6,0	1/1:15,6:16:8.89:126,9,0	./.	0/0:1,0:1:3.01:0,3,50	./.	./.
chr10	75097319	.	GGTTTT	G	4200.45	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.147;DP=625;FS=4.215;HRun=0;HaplotypeScore=115.3815;InbreedingCoeff=0.9610;MQ=74.86;MQ0=3;MQRankSum=-0.580;QD=34.15;ReadPosRankSum=1.343;VQSLOD=3.6572;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,105,2928	0/0:8,0:8:21.07:0,21,593	0/0:38,0:27:30.68:0,31,740	0/0:57,0:30:42.13:0,42,911	0/0:18,0:18:36.59:0,37,1033	0/0:27,0:27:63.22:0,63,1791	0/0:17,0:17:36.12:0,36,1031	0/0:27,0:27:42.14:0,42,1141	0/0:24,0:24:57.20:0,57,1606	0/0:23,0:23:57.20:0,57,1649	0/0:19,0:19:45.15:0,45,1282	0/0:11,0:11:24.08:0,24,677	0/0:15,0:15:36.12:0,36,1017	0/0:10,0:10:27.09:0,27,781	0/0:22,0:22:57.20:0,57,1644	0/0:21,0:21:63.22:0,63,1804	0/0:31,0:31:72.18:0,72,1945	0/0:16,0:16:39.11:0,39,993	1/1:9,8:17:21.07:397,21,0	1/1:2,16:18:45.15:851,45,0	1/1:9,15:24:40.38:791,40,0	0/0:18,0:18:42.14:0,42,1152	0/0:22,0:22:48.16:0,48,1365	0/0:26,0:26:69.24:0,69,1981	0/0:11,0:11:24.08:0,24,693	1/1:7,24:31:69.19:1197,69,0	1/1:4,23:26:48.16:907,48,0	1/1:3,3:6:3.01:57,3,0
chr10	75097479	.	G	GT	2147.46	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-7.192;DP=492;FS=0.467;HRun=10;HaplotypeScore=54.6206;InbreedingCoeff=0.9650;MQ=72.46;MQ0=2;MQRankSum=-1.660;QD=21.26;ReadPosRankSum=-1.288;VQSLOD=4.0133;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,107,868	0/0:13,0:13:32.94:0,33,271	0/0:11,0:9:7.45:0,7,53	0/0:13,0:13:18.81:0,19,127	0/0:18,0:18:50.94:0,51,419	0/0:16,0:16:44.90:0,45,364	0/0:17,0:17:47.95:0,48,394	0/0:22,1:23:30.90:0,31,460	0/0:12,0:11:26.95:0,27,222	0/0:24,1:25:27.91:0,28,432	0/0:17,0:16:38.95:0,39,320	0/0:9,0:9:18.86:0,19,150	0/0:12,0:12:35.96:0,36,296	0/0:13,0:13:29.93:0,30,240	0/0:19,0:19:50.92:0,51,416	0/0:17,0:17:47.93:0,48,394	0/0:26,0:26:56.87:0,57,464	0/0:13,0:13:35.96:0,36,296	1/1:3,12:15:14.47:359,14,0	1/1:2,13:16:35.90:357,36,0	1/1:3,5:8:9.02:96,9,0	0/0:15,0:17:46.97:0,47,372	0/0:17,0:17:44.77:0,45,358	0/0:20,0:20:56.93:0,57,468	0/0:20,0:21:55.96:0,56,449	1/1:1,16:17:44.92:435,45,0	1/1:2,24:28:65.83:668,66,0	1/1:2,15:16:39.10:416,39,0
chr10	75098781	.	GTAGA	G	4477.38	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=5.532;DP=712;FS=7.544;HRun=0;HaplotypeScore=149.9826;InbreedingCoeff=0.8576;MQ=68.75;MQ0=4;MQRankSum=1.550;QD=24.47;ReadPosRankSum=6.079;VQSLOD=3.5737;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,24:37:28.81:797,29,0	0/0:10,0:10:18.06:0,18,402	0/0:26,0:22:5.80:0,6,86	0/0:19,0:15:10.84:0,11,153	0/0:32,0:32:57.20:0,57,1305	0/0:35,0:35:78.27:0,78,1818	0/0:15,0:15:0.18:0,0,593	0/0:30,0:30:36.11:0,36,703	1/1:6,18:24:42.14:678,42,0	0/0:36,0:37:60.55:0,61,879	0/0:10,0:25:9.02:0,9,131	1/1:4,17:21:36.12:581,36,0	1/1:11,17:27:39.01:629,39,0	0/0:21,0:21:42.14:0,42,944	0/0:24,0:24:45.14:0,45,1016	0/0:15,0:15:0.47:0,0,1	0/0:29,0:29:66.20:0,66,1515	0/0:20,0:20:39.01:0,39,799	0/0:9,0:19:23.94:0,24,269	0/0:24,0:23:8.48:0,8,67	0/0:23,0:23:24.20:0,24,243	1/1:5,21:26:51.17:823,51,0	1/1:8,24:32:51.17:823,51,0	1/1:4,9:13:9.03:145,9,0	0/0:35,0:34:15.01:0,15,193	0/0:15,0:41:42.88:0,43,471	0/0:17,0:38:12.04:0,12,177	0/0:6,0:11:11.97:0,12,120
chr10	75099063	.	T	TG	777.78	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-0.389;DP=492;FS=31.986;HRun=0;HaplotypeScore=49.9669;InbreedingCoeff=0.8755;MQ=69.87;MQ0=0;MQRankSum=-4.683;QD=11.97;ReadPosRankSum=-2.470;VQSLOD=1.7028;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1659	0/0:9,0:9:27.07:0,27,346	0/0:11,0:10:27.06:0,27,321	0/0:12,0:11:27:0,27,313	0/0:21,0:21:63.19:0,63,847	0/0:19,0:19:57.18:0,57,772	0/0:15,0:15:42.14:0,42,586	0/0:42,0:42:99:0,123,1640	0/0:16,0:16:48.16:0,48,669	0/0:34,0:34:99:0,99,1355	0/0:19,0:19:57.16:0,57,732	0/0:17,0:17:51.12:0,51,675	0/0:12,0:12:36.06:0,36,448	0/0:18,0:18:54.17:0,54,735	0/0:18,0:18:54.17:0,54,741	0/0:13,0:13:39.12:0,39,530	0/0:30,0:29:87.28:0,87,1195	0/0:14,0:14:39.01:0,39,475	1/1:0,10:10:29.62:220,30,0	1/1:0,12:12:3.01:44,3,0	1/1:1,7:8:5.99:65,6,0	0/0:15,0:15:45.14:0,45,615	0/0:24,0:24:69.22:0,69,948	0/0:12,0:12:33.09:0,33,424	0/0:15,0:15:45.15:0,45,623	1/1:1,21:22:5.58:336,6,0	1/1:12,0:12:35.43:256,35,0	1/1:1,0:1:2.94:18,3,0
chr10	75100124	.	GGT	G	435.51	PASS	AB=0.865;AC=14;AF=0.350;AN=40;BaseQRankSum=1.756;DP=441;FS=1.952;HRun=0;HaplotypeScore=75.2799;InbreedingCoeff=0.0797;MQ=69.35;MQ0=16;MQRankSum=0.385;QD=2.38;ReadPosRankSum=0.622;VQSLOD=1.8329;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,2:21:5.85:6,0,252	0/0:9,0:9:5.45:0,5,101	./.	./.	0/0:17,0:23:8.97:0,9,84	0/1:14,2:17:31.53:32,0,96	0/0:25,0:25:21:0,21,218	0/0:21,0:20:5.20:0,5,28	./.	0/1:23,0:22:4.05:78,0,4	0/1:8,5:13:0:0,0,0	0/0:10,0:17:5.97:0,6,46	0/1:13,1:14:15:26,0,15	0/0:12,0:12:11.98:0,12,155	0/1:20,3:24:70.73:71,0,164	1/1:12,6:18:14.87:144,15,0	0/1:18,2:20:28.48:28,0,139	0/1:11,5:16:20.40:20,0,99	./.	./.	./.	0/0:12,3:14:5.03:0,5,101	0/0:16,0:15:3.01:0,3,41	0/0:19,0:32:11.98:0,12,101	1/1:8,1:11:14.85:130,15,0	1/1:2,0:1:3.01:32,3,0	./.	./.
chr10	75109691	.	ATCTCTCTCTCTCTCTCTCTCTCTCTCTC	A	1241.22	PASS	AC=10;AF=0.263;AN=38;BaseQRankSum=3.069;DP=394;FS=1.242;HRun=0;HaplotypeScore=286.5837;InbreedingCoeff=0.5368;MQ=77.58;MQ0=17;MQRankSum=0.489;QD=13.35;ReadPosRankSum=1.737;VQSLOD=2.3146;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:30:11.91:126,12,0	0/0:9,0:9:3.48:0,3,286	0/0:39,0:27:3.01:0,3,44	0/0:37,0:21:1.82:0,2,5	0/0:21,0:20:6.02:0,6,407	0/0:14,0:13:3.48:0,3,73	0/0:22,0:22:12.88:0,13,759	0/0:18,0:17:7.27:0,7,408	1/1:12,4:16:3.01:215,3,0	0/0:34,0:32:32.77:0,33,2095	./.	1/1:9,3:12:3.01:215,3,0	./.	0/0:10,0:10:5.04:0,5,119	0/0:12,0:12:6:0,6,99	0/0:15,0:15:12.04:0,12,698	0/0:15,0:15:9.03:0,9,464	0/0:10,0:9:6:0,6,160	./.	./.	./.	1/1:12,5:18:12.04:720,12,0	./.	1/1:15,0:15:6.02:92,6,0	0/0:11,0:9:3.01:0,3,380	./.	./.	./.
chr10	75110293	.	T	TA	3756.31	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-12.000;DP=625;FS=1.279;HRun=7;HaplotypeScore=62.1528;InbreedingCoeff=0.9974;MQ=73.45;MQ0=0;MQRankSum=-2.202;QD=28.89;ReadPosRankSum=1.101;VQSLOD=4.2810;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,955	0/0:10,0:10:24.03:0,24,232	0/0:17,0:18:19.87:0,20,325	0/0:14,0:14:21.01:0,21,199	0/0:35,0:35:87.53:0,88,820	0/0:23,0:23:60.09:0,60,579	0/0:24,0:24:60.07:0,60,570	0/0:23,0:23:51.08:0,51,492	0/0:16,0:16:42.06:0,42,401	0/0:41,0:41:99:0,105,1011	0/0:20,0:20:48.05:0,48,456	0/0:17,0:17:36.06:0,36,348	0/0:17,0:17:48.08:0,48,463	0/0:18,0:18:45.05:0,45,424	0/0:18,0:18:45.06:0,45,429	0/0:21,0:21:51.05:0,51,481	0/0:28,0:28:76.04:0,76,742	0/0:17,0:17:51.02:0,51,481	1/1:9,12:21:36.11:435,36,0	1/1:2,28:30:55.29:948,55,0	1/1:1,14:16:32.14:429,32,0	0/0:26,0:26:75.10:0,75,714	0/0:31,0:31:84.13:0,84,811	0/0:21,0:21:51.03:0,51,482	0/0:20,0:20:60.10:0,60,579	1/1:3,33:36:99:1146,99,0	1/1:2,13:15:30.09:363,30,0	1/1:0,12:12:36.11:435,36,0
chr10	75111049	.	AAT	A	2619.21	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.012;DP=522;FS=6.304;HRun=0;HaplotypeScore=77.0623;InbreedingCoeff=0.9864;MQ=87.08;MQ0=0;MQRankSum=-1.476;QD=36.89;ReadPosRankSum=1.221;VQSLOD=5.7817;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,1:18:11.87:0,12,859	0/0:6,0:6:18.06:0,18,325	0/0:14,0:14:42.14:0,42,739	0/0:21,0:21:60.13:0,60,1002	0/0:22,0:22:66.21:0,66,1196	0/0:29,0:29:87.30:0,87,1612	0/0:16,0:16:45.15:0,45,828	0/0:28,0:28:75.25:0,75,1372	0/0:20,0:20:60.17:0,60,1060	1/1:1,21:22:63.19:888,63,0	1/1:0,18:18:54.18:787,54,0	0/0:11,0:11:33.10:0,33,587	0/0:12,0:12:36.12:0,36,666	0/0:12,0:12:33.11:0,33,611	0/0:19,0:19:54.18:0,54,991	1/1:1,15:16:39.13:574,39,0	0/0:19,0:19:57.20:0,57,1068	0/0:20,0:20:54.16:0,54,956	0/0:11,0:11:33.11:0,33,594	0/0:28,0:28:84.29:0,84,1566	0/0:19,0:19:57.16:0,57,994	0/0:19,0:19:57.18:0,57,1024	0/0:19,0:19:57.20:0,57,1063	0/0:15,0:15:42.13:0,42,733	1/1:0,15:15:36.12:530,36,0	0/0:31,1:32:52.13:0,52,1650	0/0:33,0:33:99:0,99,1846	0/0:8,0:8:18.06:0,18,304
chr10	75113499	.	CCACACA	C	1201.45	PASS	AB=0.875;AC=17;AF=0.340;AN=50;BaseQRankSum=5.858;DP=446;FS=19.709;HRun=0;HaplotypeScore=100.8748;InbreedingCoeff=0.6448;MQ=65.06;MQ0=12;MQRankSum=-6.224;QD=7.56;ReadPosRankSum=1.131;VQSLOD=0.6245;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:26:16.19:21,0,16	0/0:4,0:5:12.04:0,12,271	./.	0/0:34,0:20:0.89:0,1,2	0/0:13,0:14:9.03:0,9,226	0/0:18,0:17:27.08:0,27,653	0/0:15,0:17:21.06:0,21,408	0/0:18,0:18:11.83:0,12,172	0/0:11,0:11:11.19:0,11,211	1/1:6,0:8:3.03:42,3,0	./.	0/0:7,0:8:5.38:0,5,80	0/0:5,0:8:9.01:0,9,100	0/0:8,0:11:8.14:0,8,211	0/0:6,0:6:6.02:0,6,135	1/1:7,0:12:12.04:168,12,0	0/0:24,0:27:39.13:0,39,933	0/0:11,0:10:21.07:0,21,636	1/1:19,0:21:6.39:52,6,0	1/1:13,7:19:12.04:242,12,0	1/1:27,0:28:0.47:1,0,0	0/0:12,0:12:6.02:0,6,136	0/0:7,0:10:2.12:0,2,37	0/0:19,0:24:24.32:0,24,472	1/1:8,0:12:9.03:126,9,0	./.	1/1:9,11:21:29.93:553,30,0	1/1:5,2:8:9.03:163,9,0
chr10	75114149	.	T	TCACACACACA	8490.85	PASS	AB=1.000;AC=31;AF=0.574;AN=54;BaseQRankSum=1.810;DP=614;FS=1.043;HRun=0;HaplotypeScore=197.7850;InbreedingCoeff=0.7524;MQ=70.88;MQ0=3;MQRankSum=-9.342;QD=25.89;ReadPosRankSum=-2.169;VQSLOD=4.0376;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,2:34:12.04:540,12,0	0/0:6,0:6:9.03:0,9,271	0/0:44,0:32:23.81:0,24,481	0/0:32,0:28:20.74:0,21,352	0/0:20,0:25:48.14:0,48,1293	0/0:29,0:29:27.18:0,27,1283	0/0:27,0:27:51.15:0,51,1347	0/0:33,0:35:57.15:0,57,1183	1/1:15,8:28:36.12:1535,36,0	1/1:20,0:20:29.71:582,30,0	1/1:15,0:15:2.94:18,3,0	1/1:13,6:21:27.09:1339,27,0	1/1:7,4:13:14.74:590,15,0	0/0:17,0:20:33.11:0,33,888	0/1:18,0:21:43.60:44,0,801	1/1:10,0:10:3.01:98,3,0	0/0:24,0:26:58.82:0,59,1739	0/0:16,0:17:17.30:0,17,923	1/1:27,0:27:40.01:1086,40,0	1/1:18,0:21:9.03:278,9,0	1/1:21,0:21:2.97:26,3,0	1/1:11,3:15:3.01:150,3,0	1/1:17,6:25:11.71:538,12,0	0/0:15,6:21:0.47:0,0,1	1/1:17,0:17:9.03:265,9,0	1/1:18,0:25:45.10:1107,45,0	1/1:11,0:14:9.03:294,9,0	./.
chr10	75114175	.	A	ACACACGCGCGCG	4819.54	PASS	AB=0.995;AC=21;AF=0.375;AN=56;BaseQRankSum=7.542;DP=616;FS=4.674;HRun=0;HaplotypeScore=245.5801;InbreedingCoeff=-0.0147;MQ=62.16;MQ0=6;MQRankSum=-10.583;QD=14.18;ReadPosRankSum=0.184;VQSLOD=3.5729;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:99:143,0,559	0/0:4,0:4:12.04:0,12,428	0/0:28,0:19:49.54:0,50,1407	0/0:31,0:22:53.80:0,54,1053	0/0:26,0:25:57.17:0,57,1871	0/0:21,0:21:33.21:0,33,1842	0/0:30,0:30:90.27:0,90,2670	0/0:42,0:42:99:0,117,2877	0/1:30,0:30:99:471,0,496	1/1:3,9:24:42.15:1243,42,0	1/1:14,0:14:18.02:469,18,0	0/1:25,0:25:99:374,0,464	0/1:15,0:15:99:291,0,181	0/0:18,0:17:48.16:0,48,1542	0/0:25,0:25:66.22:0,66,1988	1/1:3,6:16:5.78:312,6,0	0/0:28,0:28:71.79:0,72,2522	0/0:22,0:22:41.16:0,41,1694	0/1:31,0:31:99:272,0,952	0/1:13,0:13:48.70:100,0,49	0/1:29,0:28:5.92:6,0,448	0/1:11,0:11:50.41:50,0,150	0/1:25,0:24:99:197,0,153	0/1:15,0:15:46.13:46,0,159	1/1:0,7:18:9.03:558,9,0	0/1:22,0:22:99:178,0,623	0/1:13,0:14:65.37:65,0,291	0/1:4,0:4:43.68:44,0,184
chr10	75114864	.	G	GT	5374.04	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-12.096;DP=723;FS=5.965;HRun=6;HaplotypeScore=72.0546;InbreedingCoeff=0.9810;MQ=83.84;MQ0=0;MQRankSum=-3.752;QD=32.37;ReadPosRankSum=0.094;VQSLOD=4.9832;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.21:0,93,949	0/0:6,0:6:18.04:0,18,184	0/0:22,0:22:7.07:0,7,304	0/0:22,0:22:56.81:0,57,539	0/0:27,0:27:72.10:0,72,716	0/0:23,0:23:60.13:0,60,612	0/0:21,0:21:60.13:0,60,612	0/0:45,0:45:99:0,126,1280	0/0:28,0:28:84.17:0,84,849	0/0:34,0:34:87.19:0,87,888	0/0:20,0:20:51.09:0,51,507	0/0:28,0:28:78.17:0,78,795	0/0:34,0:34:99:0,99,1000	0/0:23,0:23:60.10:0,60,598	0/0:35,0:35:99:0,99,1001	0/0:30,0:30:78.17:0,78,795	0/0:34,0:34:99:0,99,994	0/0:16,0:16:45.10:0,45,459	1/1:1,25:26:75.23:930,75,0	1/1:5,24:29:75.24:941,75,0	1/1:5,24:29:72.23:906,72,0	0/0:18,0:18:45.08:0,45,452	0/0:26,0:26:69.15:0,69,704	0/0:20,0:20:57.11:0,57,573	0/0:13,0:13:30.06:0,30,306	1/1:8,23:31:41.60:824,42,0	1/1:0,35:35:96.31:1207,96,0	1/1:1,15:16:45.14:566,45,0
chr10	75115046	.	AT	A	2910.52	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.558;DP=615;FS=4.160;HRun=8;HaplotypeScore=75.5534;InbreedingCoeff=0.9949;MQ=71.58;MQ0=5;MQRankSum=-7.266;QD=22.56;ReadPosRankSum=1.761;VQSLOD=4.3565;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:60.17:0,60,713	0/0:9,0:9:24.07:0,24,285	0/0:31,0:17:30.03:0,30,330	0/0:36,1:20:22.58:0,23,328	0/0:36,0:36:93.29:0,93,1123	0/0:22,0:22:63.19:0,63,761	0/0:14,0:14:27.08:0,27,326	0/0:36,0:36:75.23:0,75,906	0/0:16,0:16:45.13:0,45,534	0/0:22,0:21:60.17:0,60,705	0/0:21,0:21:63.14:0,63,735	0/0:11,0:11:30.08:0,30,350	0/0:18,0:18:39.11:0,39,460	0/0:9,0:9:27.08:0,27,326	0/0:14,0:14:27.07:0,27,306	0/0:15,0:15:39.04:0,39,438	0/0:32,1:33:49.25:0,49,865	0/0:21,0:21:60.18:0,60,725	1/1:3,19:22:48.07:463,48,0	1/1:3,19:22:57.09:550,57,0	1/1:1,5:6:15.02:145,15,0	0/0:22,0:22:57.17:0,57,689	0/0:25,0:24:69.18:0,69,810	0/0:21,0:20:54.11:0,54,622	0/0:26,0:26:66.20:0,66,797	1/1:5,28:32:81.13:782,81,0	1/1:4,18:22:51.08:492,51,0	1/1:0,24:24:69.11:666,69,0
chr10	75115058	.	CT	C	1410.29	PASS	AB=0.882;AC=13;AF=0.232;AN=56;BaseQRankSum=12.366;DP=606;FS=8.925;HRun=12;HaplotypeScore=74.8436;InbreedingCoeff=0.7863;MQ=61.06;MQ0=15;MQRankSum=-5.537;QD=10.00;ReadPosRankSum=1.384;VQSLOD=2.4963;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,1:23:27.35:0,27,440	0/0:7,0:8:17.87:0,18,167	0/0:40,0:11:17.27:0,17,127	0/0:33,0:15:5.68:0,6,82	0/0:34,0:34:78.88:0,79,778	0/0:19,0:20:53.94:0,54,529	0/0:9,0:10:8.18:0,8,116	0/0:25,2:26:9.51:0,10,413	0/0:15,0:15:36.07:0,36,365	0/0:22,2:22:6.99:0,7,414	0/0:21,0:22:30.29:0,30,478	0/0:11,0:11:23.92:0,24,228	0/0:21,1:21:11.90:0,12,256	0/0:10,0:10:20.97:0,21,193	0/0:12,0:12:29.89:0,30,286	0/1:13,2:15:10.38:10,0,262	0/0:30,1:32:50.10:0,50,704	0/0:23,0:23:50.69:0,51,618	1/1:9,11:19:30.42:213,30,0	1/1:10,14:24:2.13:187,2,0	1/1:1,4:5:8.95:70,9,0	0/0:22,0:22:38.23:0,38,455	0/0:23,1:25:54.82:0,55,534	0/0:21,0:21:34.52:0,35,375	0/0:25,0:25:60.10:0,60,601	1/1:13,18:30:48.91:449,49,0	1/1:6,15:21:18.30:302,18,0	1/1:10,13:24:48.09:356,48,0
chr10	75115190	.	CGT	C	1472.60	PASS	AB=0.963;AC=12;AF=0.214;AN=56;BaseQRankSum=2.401;DP=669;FS=0.000;HRun=0;HaplotypeScore=125.9929;InbreedingCoeff=0.4493;MQ=56.93;MQ0=6;MQRankSum=1.139;QD=8.61;ReadPosRankSum=1.605;VQSLOD=3.4562;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,1:38:26.10:0,26,988	0/1:8,0:8:16.45:16,0,207	0/0:26,0:9:2.97:0,3,22	0/0:25,0:12:5.93:0,6,58	0/0:25,1:28:5.52:0,6,828	0/0:18,0:19:6.93:0,7,641	0/0:26,1:27:19.02:0,19,691	0/0:33,0:31:34.35:0,34,473	0/0:23,0:23:11.33:0,11,658	1/1:16,23:39:30.72:726,31,0	1/1:4,15:20:0.77:381,1,0	0/0:16,1:18:15.26:0,15,586	0/0:19,0:18:32.12:0,32,438	0/0:14,1:15:10.16:0,10,606	0/0:24,0:25:43.03:0,43,801	1/1:4,11:16:14.88:154,15,0	0/1:26,2:27:16.36:16,0,634	0/1:22,1:23:62.48:62,0,418	0/0:14,0:18:32.93:0,33,311	0/0:4,0:21:37.85:0,38,298	0/0:38,0:46:74.17:0,74,555	0/0:18,0:18:18.35:0,18,525	0/0:25,0:25:28.62:0,29,878	0/1:22,1:23:3.18:3,0,366	1/1:2,10:14:26.74:273,27,0	0/0:24,1:33:15.32:0,15,464	0/0:13,0:20:35.47:0,35,305	0/0:5,0:14:35.28:0,35,294
chr10	75115319	.	A	ATG	9449.79	PASS	AB=0.563;AC=11;AF=0.196;AN=56;BaseQRankSum=-14.533;DP=988;FS=8.270;HRun=0;HaplotypeScore=119.4547;InbreedingCoeff=0.8993;MQ=55.77;MQ0=15;MQRankSum=0.649;QD=36.77;ReadPosRankSum=2.920;VQSLOD=7.0520;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,101,1301	0/0:11,0:11:30.07:0,30,376	0/0:48,0:13:12.49:0,12,185	0/0:49,0:12:6.88:0,7,79	0/0:20,0:20:54.17:0,54,708	0/0:19,0:19:51.14:0,51,653	0/0:45,0:45:99:0,117,1535	0/0:41,0:39:93.22:0,93,1157	0/0:47,0:46:99:0,117,1504	0/0:34,0:34:87.28:0,87,1142	0/0:27,0:27:60.19:0,60,785	0/0:37,0:37:90.27:0,90,1151	0/0:29,0:29:81.20:0,81,1028	0/0:38,0:38:63.84:0,64,1153	0/0:47,0:46:90.94:0,91,1420	0/0:34,0:34:96.24:0,96,1210	0/0:24,0:24:66.20:0,66,850	0/0:39,0:39:98.71:0,99,1245	1/1:3,24:27:69.13:1093,69,0	1/1:2,35:37:99:1697,99,0	1/1:10,113:122:99:4097,241,0	0/0:23,0:23:63.19:0,63,814	0/0:23,0:23:60.19:0,60,788	0/0:40,0:40:87.26:0,87,1118	0/0:19,0:19:54.18:0,54,709	0/1:6,21:27:3.62:1104,0,4	1/1:4,17:21:42.14:720,42,0	1/1:3,16:20:45.15:739,45,0
chr10	75115404	.	AGT	A	6085.41	PASS	AB=0.939;AC=13;AF=0.232;AN=56;BaseQRankSum=5.492;DP=1065;FS=0.630;HRun=0;HaplotypeScore=193.0732;InbreedingCoeff=0.9400;MQ=61.03;MQ0=10;MQRankSum=1.144;QD=23.86;ReadPosRankSum=0.807;VQSLOD=4.7861;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,132,2168	0/0:13,0:13:30.10:0,30,490	0/0:73,0:40:51.48:0,51,973	0/0:70,0:40:52.06:0,52,824	0/0:26,0:26:60.21:0,60,993	0/0:24,1:25:34.40:0,34,1105	0/0:51,1:52:55.02:0,55,1722	0/0:34,0:34:49.52:0,50,1291	0/0:50,0:50:99:0,101,2080	0/0:45,0:46:99:0,117,1869	0/0:27,0:27:66.15:0,66,1067	0/0:40,1:41:70.56:0,71,1636	0/0:30,0:30:81.21:0,81,1283	0/0:40,0:40:99:0,102,1646	0/0:39,0:39:96.33:0,96,1588	0/0:31,0:30:81.22:0,81,1257	0/0:30,0:30:84.15:0,84,1295	0/1:29,1:29:1.32:1,0,886	1/1:13,9:20:37.91:487,38,0	1/1:2,13:15:39.12:482,39,0	1/1:51,64:113:99:3191,258,0	0/0:33,0:33:90.28:0,90,1425	0/0:22,0:22:60.17:0,60,930	0/0:59,0:59:95.02:0,95,2059	0/0:17,0:17:36.12:0,36,590	1/1:5,30:34:34.30:939,34,0	1/1:5,12:18:21.48:535,21,0	1/1:8,10:18:36.11:450,36,0
chr10	75117880	.	T	TCA	3014.07	PASS	AB=0.692;AC=27;AF=0.540;AN=50;BaseQRankSum=-2.463;DP=528;FS=0.000;HRun=0;HaplotypeScore=79.8529;InbreedingCoeff=0.5609;MQ=67.89;MQ0=13;MQRankSum=0.532;QD=10.08;ReadPosRankSum=-0.883;VQSLOD=3.0111;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,18:42:18.06:270,18,0	0/0:2,0:5:11.53:0,12,75	./.	./.	0/0:11,0:13:14.87:0,15,146	0/0:17,0:16:24.06:0,24,264	0/0:22,0:22:18.04:0,18,198	0/0:23,0:23:9.02:0,9,99	0/1:13,10:23:2.84:374,0,3	0/1:10,6:16:14.90:203,0,15	0/1:7,8:15:20.90:123,0,21	1/1:9,6:15:15.05:225,15,0	1/1:7,10:19:19:270,19,0	0/0:18,0:19:14.83:0,15,134	0/0:12,0:13:14.70:0,15,127	1/1:3,4:8:9.03:135,9,0	0/0:20,0:23:32.58:0,33,305	0/0:26,0:29:32.88:0,33,343	1/1:13,0:12:12:108,12,0	1/1:12,0:12:8.82:84,9,0	1/1:18,0:16:11.98:99,12,0	0/1:3,2:6:8.09:39,0,8	1/1:6,5:10:9.03:135,9,0	0/1:18,21:43:41.66:662,0,42	1/1:9,6:16:15.05:225,15,0	1/1:23,0:22:18.44:167,18,0	1/1:13,0:18:9.01:86,9,0	./.
chr10	75122551	.	C	CGTTTT	8586.93	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=-3.818;DP=665;FS=0.446;HRun=0;HaplotypeScore=125.1293;InbreedingCoeff=0.8828;MQ=68.51;MQ0=8;MQRankSum=-5.120;QD=21.36;ReadPosRankSum=-1.249;VQSLOD=4.3000;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,20:40:51.17:1380,51,0	0/0:9,0:9:12.04:0,12,214	0/1:40,0:27:1.48:1,0,35	0/1:48,0:27:0.18:0,0,0	0/0:17,0:17:24.08:0,24,430	0/0:22,0:22:39.13:0,39,691	0/0:30,0:30:42.13:0,42,717	0/0:30,0:29:9.01:0,9,106	1/1:11,7:18:6.02:168,6,0	0/0:13,0:25:29.76:0,30,326	0/0:4,0:9:12.04:0,12,140	1/1:8,8:16:18.06:503,18,0	1/1:10,8:19:21.07:586,21,0	0/0:19,0:19:27.08:0,27,455	0/0:18,0:18:33.09:0,33,524	0/0:2,0:17:42.12:0,42,484	0/0:33,0:33:54.11:0,54,869	0/0:23,0:23:39.08:0,39,629	1/1:20,0:19:14.95:232,15,0	1/1:24,0:24:35.59:427,36,0	1/1:21,0:21:12.01:214,12,0	1/1:10,9:20:27.01:679,27,0	1/1:7,10:17:24.08:671,24,0	1/1:8,34:42:81.28:2264,81,0	0/0:3,0:10:12.04:0,12,140	1/1:28,0:28:9.75:469,10,0	1/1:29,0:29:65.09:795,65,0	1/1:17,0:16:32.36:198,32,0
chr10	75122913	.	TGAGAGAGAGAGA	T	91.89	PASS	AB=0.963;AC=7;AF=0.152;AN=46;BaseQRankSum=2.641;DP=354;FS=32.592;HRun=0;HaplotypeScore=120.2331;InbreedingCoeff=0.3403;MQ=42.73;MQ0=16;MQRankSum=0.303;QD=2.00;ReadPosRankSum=-2.483;VQSLOD=-0.0133;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:5,0:5:6.02:0,6,97	./.	./.	0/0:20,0:22:15.03:0,15,277	0/1:15,0:15:9.75:10,0,157	0/0:12,0:11:0.47:0,0,1	0/0:17,0:16:8.91:0,9,114	0/0:6,0:6:9.02:0,9,162	0/0:7,0:6:3.01:0,3,40	0/1:11,0:9:0:0,0,0	0/0:15,0:15:11.77:0,12,236	0/0:10,0:10:15.05:0,15,255	0/0:10,0:9:12.02:0,12,376	0/0:10,0:9:9.03:0,9,380	1/1:6,0:5:3.01:32,3,0	0/0:19,0:18:30.06:0,30,1213	0/0:15,0:14:18.06:0,18,742	0/0:9,0:9:3.01:0,3,38	0/0:13,0:13:1.25:0,1,3	./.	./.	0/0:12,0:11:6.02:0,6,100	0/0:23,0:21:14.63:0,15,418	0/0:14,0:14:0:0,0,0	0/1:7,0:8:6.70:92,0,7	0/0:19,0:19:9.01:0,9,104	1/1:6,0:6:3.01:62,3,0
chr10	75123383	.	C	CTGTT	8888.79	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-11.544;DP=642;FS=2.747;HRun=0;HaplotypeScore=104.2441;InbreedingCoeff=0.9761;MQ=63.60;MQ0=2;MQRankSum=-2.830;QD=42.53;ReadPosRankSum=0.763;VQSLOD=4.9482;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:87.28:0,87,1411	0/0:4,0:4:9.03:0,9,149	0/0:24,0:22:32.98:0,33,511	0/0:18,0:16:27.08:0,27,398	0/0:26,0:26:54.18:0,54,892	0/0:19,0:19:54.18:0,54,892	0/0:28,0:28:63.20:0,63,1012	0/0:24,0:24:45.15:0,45,741	0/0:25,0:25:60.21:0,60,990	1/1:8,10:19:33.11:784,33,0	1/1:12,12:24:42.01:866,42,0	0/0:22,0:22:57.19:0,57,938	0/0:19,0:19:33.10:0,33,516	0/0:25,0:25:60.19:0,60,963	0/0:23,0:23:54.16:0,54,844	1/1:4,12:16:36.09:829,36,0	0/0:34,0:34:75.37:0,75,1227	0/0:34,0:34:63.37:0,63,1063	1/1:17,10:26:37.35:815,37,0	1/1:3,13:16:36.12:880,36,0	1/1:13,23:36:66.23:1615,66,0	0/0:18,0:18:42.14:0,42,689	0/0:14,0:14:39.11:0,39,595	0/0:37,0:37:93.24:0,93,1455	1/1:7,12:21:33.11:806,33,0	1/1:14,14:28:10.65:1232,11,0	1/1:8,10:18:36.12:844,36,0	1/1:0,2:3:9.03:218,9,0
chr10	75123831	.	C	CAT	1748.78	PASS	AB=0.915;AC=12;AF=0.214;AN=56;BaseQRankSum=11.128;DP=740;FS=1.319;HRun=0;HaplotypeScore=155.6267;InbreedingCoeff=-0.2702;MQ=57.85;MQ0=2;MQRankSum=-3.510;QD=5.87;ReadPosRankSum=-0.873;VQSLOD=3.0902;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:31.98:0,32,220	0/0:14,0:14:42.12:0,42,599	0/0:29,0:24:67.11:0,67,990	0/0:21,0:16:48.15:0,48,671	0/0:38,0:38:99:0,114,1559	0/0:20,0:20:57.14:0,57,805	0/0:23,0:23:63.17:0,63,899	0/0:38,0:38:99:0,106,1430	0/1:30,0:30:92.22:118,0,92	0/1:26,7:33:99:290,0,108	0/1:14,8:22:74.02:247,0,74	0/1:23,0:23:53.82:54,0,93	0/1:27,0:27:53.75:54,0,140	0/0:23,0:23:66.12:0,66,874	0/0:35,0:35:99:0,102,1488	0/1:14,15:29:36.02:563,0,36	0/0:24,0:23:39.40:0,39,879	0/0:17,0:17:48.07:0,48,660	0/0:17,0:17:46.33:0,46,255	0/0:35,0:35:78.22:0,78,609	0/1:24,0:23:10.27:10,0,251	0/1:32,0:32:75.77:152,0,76	0/1:24,0:24:72.28:102,0,72	0/1:18,0:18:67.90:68,0,82	0/1:16,7:23:99:192,0,103	0/0:39,0:39:62.22:0,62,537	0/0:28,0:28:82.55:0,83,519	0/1:13,0:13:50.32:50,0,137
chr10	75123833	.	C	CAT	2440.50	PASS	AB=0.948;AC=15;AF=0.268;AN=56;BaseQRankSum=10.009;DP=746;FS=9.858;HRun=0;HaplotypeScore=153.2913;InbreedingCoeff=-0.1960;MQ=56.51;MQ0=2;MQRankSum=-2.398;QD=6.42;ReadPosRankSum=-2.804;VQSLOD=2.2952;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:7.40:0,7,140	0/0:14,0:14:42.12:0,42,589	0/0:27,0:22:61.08:0,61,870	0/0:21,0:15:45.08:0,45,593	0/0:37,0:37:99:0,111,1525	0/0:20,0:20:57.14:0,57,803	0/0:23,0:23:63.17:0,63,879	0/0:37,0:37:59.78:0,60,1267	0/1:30,0:30:55.93:191,0,56	0/1:26,7:33:57.03:443,0,57	0/1:14,8:22:32.61:344,0,33	0/1:26,0:26:66.99:80,0,67	0/1:27,0:27:43.49:43,0,118	0/0:23,0:23:66.12:0,66,866	0/0:36,0:36:99:0,108,1524	1/1:15,15:30:13.33:704,13,0	0/0:24,0:23:61.08:0,61,872	0/0:18,0:18:51.05:0,51,673	0/0:18,0:18:35.06:0,35,153	0/1:35,0:35:26.21:26,0,335	0/1:25,0:24:42.70:43,0,148	0/1:32,0:32:99:125,0,104	0/1:24,0:24:53.79:118,0,54	0/1:18,0:18:58.96:71,0,59	0/1:16,1:23:63.44:242,0,63	0/1:41,0:41:99:149,0,246	0/0:28,0:28:28.63:0,29,314	0/1:14,0:14:23.26:23,0,129
chr10	75123860	.	A	ATACA	5840.32	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=6.919;DP=791;FS=11.044;HRun=0;HaplotypeScore=168.7646;InbreedingCoeff=0.5604;MQ=56.27;MQ0=4;MQRankSum=-1.877;QD=10.70;ReadPosRankSum=-2.057;VQSLOD=3.3649;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:47,0:47:2.95:25,3,0	0/0:10,0:10:21.04:0,21,285	0/1:27,0:17:0:0,0,0	0/1:32,0:19:0:0,0,0	0/0:41,0:41:84.14:0,84,1122	0/0:26,0:26:48.14:0,48,709	0/0:22,0:22:36.03:0,36,412	0/0:29,0:29:32.81:0,33,263	1/1:32,0:32:24.08:432,24,0	1/1:40,7:48:23.12:976,23,0	1/1:23,0:23:45.09:788,45,0	1/1:31,0:31:15.03:253,15,0	1/1:29,0:29:9.50:158,10,0	0/0:20,0:20:48.04:0,48,588	0/0:36,0:36:78.16:0,78,1061	1/1:34,0:34:69.17:1357,69,0	0/0:20,0:19:22.30:0,22,434	0/0:19,0:19:32.95:0,33,369	0/0:22,0:22:20.77:0,21,179	0/1:32,0:32:57.90:58,0,422	0/1:29,0:28:60.94:61,0,162	1/1:34,0:34:38.91:436,39,0	1/1:23,0:23:17.75:316,18,0	1/1:18,0:18:13.86:230,14,0	1/1:23,0:23:32.70:524,33,0	0/1:38,0:38:99:179,0,346	0/1:29,0:29:10.49:10,0,312	0/1:17,0:16:37.01:37,0,128
chr10	75123865	.	T	TACATACATACAC	6223.60	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=1.975;DP=802;FS=5.709;HRun=0;HaplotypeScore=272.7810;InbreedingCoeff=0.6477;MQ=56.99;MQ0=3;MQRankSum=-4.503;QD=17.58;ReadPosRankSum=-0.191;VQSLOD=3.0997;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:47,0:48:49.11:381,49,0	0/0:10,0:10:30.06:0,30,702	0/0:28,0:18:48.58:0,49,434	0/0:34,0:23:60.32:0,60,555	0/0:41,0:41:99:0,114,2850	0/0:27,0:27:78.11:0,78,1942	0/0:23,0:23:65.24:0,65,1106	0/0:30,0:30:87.04:0,87,1024	1/1:4,22:33:24.08:1447,24,0	0/1:48,0:48:99:205,0,671	0/1:22,0:22:62.85:63,0,170	1/1:2,22:32:12.04:647,12,0	1/1:2,16:30:12.84:481,13,0	0/0:22,0:22:63.15:0,63,1630	0/0:34,0:34:99:0,99,2678	0/1:35,0:35:66.55:67,0,286	0/0:21,0:20:55.24:0,55,1216	0/0:18,0:18:51.03:0,51,976	0/0:18,0:18:43.17:0,43,924	0/0:30,0:30:80.04:0,80,2031	0/0:26,0:26:67.86:0,68,1061	1/1:2,23:37:11.52:709,12,0	1/1:0,16:24:15.30:901,15,0	1/1:2,16:22:11.86:729,12,0	0/1:23,0:23:99:596,0,133	0/0:39,0:39:99:0,108,2003	0/0:31,0:31:75.12:0,75,1799	0/0:16,0:15:42.49:0,42,676
chr10	75124659	.	TC	T	525.92	PASS	AB=0.874;AC=15;AF=0.326;AN=46;BaseQRankSum=-1.109;DP=354;FS=0.000;HRun=2;HaplotypeScore=43.9209;InbreedingCoeff=-0.2198;MQ=27.07;MQ0=98;MQRankSum=0.123;QD=2.92;ReadPosRankSum=-0.361;VQSLOD=-0.6167;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:10:7.84:0,8,84	0/0:3,0:2:2.50:0,2,9	./.	./.	0/0:13,0:6:2.60:0,3,10	0/0:17,0:7:8.52:0,9,90	0/1:18,1:13:29.40:29,0,76	0/0:29,0:15:32.88:0,33,376	0/1:8,2:6:11.21:68,0,11	0/1:17,0:13:9.97:201,0,10	1/1:3,3:3:3.01:38,3,0	0/1:11,2:10:1.75:2,0,78	./.	0/0:10,0:8:9.33:0,9,136	0/0:6,1:5:8.96:0,9,124	./.	0/0:19,0:10:20.75:0,21,255	0/0:12,0:7:18.03:0,18,219	0/1:6,2:4:31:67,0,31	0/1:7,3:8:19.73:29,0,20	0/1:28,1:13:17.39:17,0,23	./.	0/1:11,1:9:30.91:31,0,34	0/0:19,1:12:2.97:0,3,10	1/1:10,8:13:0.90:35,1,0	0/1:12,2:9:58.77:59,0,95	0/1:6,3:7:51.54:52,0,60	0/1:13,2:5:32.06:32,0,34
chr10	75125790	.	C	CG	9102.53	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.290;DP=604;FS=4.226;HRun=0;HaplotypeScore=71.1921;InbreedingCoeff=0.9925;MQ=67.88;MQ0=1;MQRankSum=-0.109;QD=40.46;ReadPosRankSum=1.540;VQSLOD=5.5559;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:81.27:0,81,1128	0/0:8,0:8:24.07:0,24,319	0/0:17,0:15:10.16:0,10,330	0/0:18,0:15:37.55:0,38,410	0/0:15,0:15:42.07:0,42,543	0/0:23,0:23:69.22:0,69,945	0/0:17,0:17:51.15:0,51,679	0/0:35,0:35:99:0,99,1329	0/0:28,0:28:84.26:0,84,1140	1/1:0,32:32:93.04:1299,93,0	1/1:1,16:17:45.07:676,45,0	0/0:17,0:17:51.16:0,51,697	0/0:23,0:23:66.15:0,66,852	0/0:16,0:16:48.12:0,48,648	0/0:21,0:21:63.19:0,63,849	1/1:0,11:11:24.08:382,24,0	0/0:28,0:28:78.20:0,78,1006	0/0:20,0:20:57.15:0,57,754	1/1:2,14:16:42.07:596,42,0	1/1:1,28:29:75.26:1186,75,0	1/1:0,33:33:87.30:1382,87,0	0/0:23,0:23:63.19:0,63,860	0/0:19,0:19:54.16:0,54,721	0/0:23,0:23:69.22:0,69,946	1/1:0,13:13:33.11:526,33,0	1/1:0,22:22:66.21:1019,66,0	1/1:0,30:30:66.22:1043,66,0	1/1:0,22:22:63.21:993,63,0
chr10	75126281	.	CAAAA	C	1835.20	PASS	AB=0.603;AC=8;AF=0.148;AN=54;BaseQRankSum=0.110;DP=388;FS=1.258;HRun=12;HaplotypeScore=92.1841;InbreedingCoeff=0.2857;MQ=58.67;MQ0=10;MQRankSum=0.910;QD=22.94;ReadPosRankSum=4.437;VQSLOD=2.2674;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:13:2.04:0,2,6	0/0:6,0:6:14.54:0,15,280	0/0:28,0:10:26.55:0,27,406	0/0:25,0:13:26.13:0,26,363	0/0:22,0:22:45.05:0,45,857	0/0:18,0:18:51.10:0,51,1085	0/0:13,0:13:33.04:0,33,718	0/0:22,0:20:51.07:0,51,1122	0/0:6,0:6:16.50:0,16,167	0/0:5,0:16:31.49:0,31,437	0/0:16,0:13:26.96:0,27,260	0/0:3,0:3:6.02:0,6,100	0/0:8,0:7:9.01:0,9,122	0/0:11,0:10:30.10:0,30,683	0/0:12,0:12:36.08:0,36,803	0/0:5,0:8:9.03:0,9,178	0/0:18,0:19:51.13:0,51,1077	0/0:16,0:14:36.46:0,36,768	0/1:5,13:18:50.68:521,0,51	0/1:8,14:22:46.39:485,0,46	1/1:1,2:3:3.01:45,3,0	0/0:10,0:10:20.26:0,20,228	0/0:15,0:14:12.52:0,13,87	./.	0/0:12,0:11:17.24:0,17,214	0/1:8,17:24:58.54:654,0,59	0/1:2,3:4:14.04:82,0,14	1/1:3,4:6:12.02:182,12,0
chr10	75127335	.	GAC	G	211.85	PASS	AB=0.959;AC=17;AF=0.340;AN=50;BaseQRankSum=5.305;DP=528;FS=3.289;HRun=0;HaplotypeScore=65.7602;InbreedingCoeff=0.0583;MQ=67.78;MQ0=9;MQRankSum=0.717;QD=0.88;ReadPosRankSum=2.481;VQSLOD=0.6914;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,7:38:9.02:96,9,0	0/0:9,0:9:3.01:0,3,44	./.	./.	0/1:14,0:14:15.98:17,0,16	0/1:22,0:24:20.44:20,0,82	0/0:17,0:17:15.02:0,15,198	0/0:20,0:20:2.97:0,3,20	0/0:17,0:17:14.96:0,15,154	./.	1/1:6,0:7:2.84:14,3,0	0/0:25,0:27:9:0,9,94	0/0:12,0:12:6.44:0,6,64	0/1:12,1:13:31.05:31,0,56	0/1:18,0:18:25.56:26,0,39	1/1:14,0:21:11.36:56,11,0	0/1:20,1:21:12.78:13,0,194	0/1:18,0:18:2.15:2,0,53	0/0:12,0:12:3:0,3,25	0/1:18,1:18:24.52:25,0,95	0/0:43,0:45:9.90:0,10,212	0/1:21,0:21:11.34:11,0,168	0/0:15,0:15:15.02:0,15,179	0/0:24,0:23:11.89:0,12,127	1/1:8,1:11:5.85:46,6,0	0/1:13,3:14:5.22:5,0,62	0/0:21,0:21:13.85:0,14,148	0/0:8,0:8:9:0,9,109
chr10	75129073	.	T	TA	1888.41	PASS	AB=0.672;AC=18;AF=0.321;AN=56;BaseQRankSum=-1.015;DP=398;FS=11.813;HRun=9;HaplotypeScore=46.4033;InbreedingCoeff=0.6912;MQ=77.41;MQ0=1;MQRankSum=-2.541;QD=11.95;ReadPosRankSum=-0.015;VQSLOD=1.2260;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:59.98:0,60,521	0/0:3,0:3:9:0,9,78	0/0:19,0:16:26.97:0,27,234	0/1:17,0:16:4.46:4,0,105	0/0:15,0:15:35.99:0,36,312	0/0:16,0:16:41.99:0,42,365	0/0:8,0:8:17.99:0,18,156	0/0:29,0:29:68.93:0,69,587	0/0:14,0:14:26.99:0,27,234	1/1:6,0:17:31.30:165,31,0	1/1:2,1:16:34.26:189,34,0	0/0:11,0:11:29.98:0,30,256	0/0:12,0:12:26.99:0,27,234	0/0:9,0:9:20.99:0,21,182	0/0:9,0:9:11.99:0,12,104	0/1:4,0:11:5.97:66,0,6	0/0:26,0:26:68.97:0,69,599	0/0:20,0:20:47.97:0,48,417	1/1:7,15:22:48.02:514,48,0	1/1:4,8:12:18.05:199,18,0	1/1:3,4:7:9.02:100,9,0	0/0:9,0:9:20.99:0,21,182	0/0:10,0:10:17.99:0,18,156	0/0:3,0:3:6:0,6,52	1/1:1,2:12:22.87:122,23,0	0/1:4,6:10:5:178,0,5	1/1:6,14:20:30.08:332,30,0	0/1:2,9:12:15.17:217,0,15
chr10	75130360	.	T	TTGTGTG	3071.70	PASS	AB=0.947;AC=30;AF=0.556;AN=54;BaseQRankSum=-0.103;DP=812;FS=6.539;HRun=0;HaplotypeScore=200.3426;InbreedingCoeff=0.4078;MQ=56.17;MQ0=15;MQRankSum=-2.775;QD=5.66;ReadPosRankSum=-4.326;VQSLOD=1.1780;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:51,0:53:84.70:156,0,85	0/1:3,0:4:33.63:34,0,36	0/1:43,0:19:0:0,0,0	./.	0/0:11,0:11:3.48:0,3,62	0/0:8,0:9:12.19:0,12,212	0/0:30,0:33:14.80:0,15,457	0/1:36,0:36:29:29,0,96	1/1:19,18:41:20.61:606,21,0	0/1:17,0:23:17.01:74,0,17	0/1:22,0:24:50.67:64,0,51	1/1:16,1:30:8.96:103,9,0	1/1:8,8:17:9.03:289,9,0	0/0:24,0:24:27.07:0,27,468	0/0:23,0:23:24.27:0,24,405	0/0:19,0:36:5.72:0,6,32	0/0:38,0:37:13.95:0,14,722	0/0:13,0:18:4.77:0,5,299	1/1:18,0:17:19.87:290,20,0	1/1:10,6:18:9.03:220,9,0	1/1:64,1:87:9.03:164,9,0	1/1:11,1:17:3.01:95,3,0	1/1:13,6:20:2.87:17,3,0	1/1:28,17:49:7.84:160,8,0	0/0:13,0:21:3.76:0,4,62	1/1:20,0:19:26.98:336,27,0	1/1:11,12:23:12.51:387,13,0	1/1:14,0:16:11.63:229,12,0
chr10	75131164	.	GTTCTA	G	9602.59	PASS	AC=18;AF=0.333;AN=54;BaseQRankSum=16.800;DP=578;FS=1.132;HRun=0;HaplotypeScore=125.4380;InbreedingCoeff=0.9982;MQ=85.28;MQ0=0;MQRankSum=-15.355;QD=60.02;ReadPosRankSum=0.295;VQSLOD=5.4497;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,4001	0/0:6,0:6:18.06:0,18,549	0/0:23,0:23:69.24:0,69,2063	0/0:28,0:28:81.28:0,81,2534	0/0:21,0:21:57.20:0,57,1898	0/0:23,0:23:69.24:0,69,2227	0/0:26,0:26:78.27:0,78,2458	0/0:29,0:29:84.27:0,84,2663	0/0:11,0:11:33.11:0,33,1099	1/1:0,23:23:69.22:1551,69,0	1/1:0,11:11:27.09:626,27,0	0/0:24,0:24:72.25:0,72,2324	0/0:19,0:19:57.16:0,57,1779	0/0:20,0:20:60.21:0,60,1999	0/0:23,0:23:69.24:0,69,2298	1/1:0,10:10:27.09:627,27,0	0/0:42,0:42:99:0,126,4047	0/0:18,0:18:54.19:0,54,1750	1/1:0,24:24:72.24:1585,72,0	1/1:0,20:21:57.20:1317,57,0	1/1:0,19:19:31.46:681,31,0	0/0:19,0:19:57.20:0,57,1827	0/0:16,0:16:48.16:0,48,1548	0/0:29,0:29:87.30:0,87,2724	1/1:0,13:13:30.10:696,30,0	1/1:0,24:24:72.20:1547,72,0	1/1:0,15:15:42.14:974,42,0	./.
chr10	75131466	.	TC	T	4947.89	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.708;DP=590;FS=2.609;HRun=2;HaplotypeScore=84.9530;InbreedingCoeff=0.9633;MQ=78.45;MQ0=0;MQRankSum=-12.695;QD=34.60;ReadPosRankSum=-0.077;VQSLOD=4.9792;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:28:69.20:878,69,0	0/0:12,0:12:33.11:0,33,495	0/0:18,0:18:51.15:0,51,725	0/0:16,0:16:48.13:0,48,696	0/0:24,0:24:66.19:0,66,943	0/0:24,0:24:69.23:0,69,1028	0/0:31,0:31:93.30:0,93,1372	0/0:37,0:37:99:0,102,1493	1/1:2,17:19:12.29:641,12,0	0/0:22,0:22:63.21:0,63,943	0/0:19,0:19:57.18:0,57,833	1/1:4,16:20:60.16:748,60,0	1/1:1,15:16:45.15:582,45,0	0/0:16,0:16:48.16:0,48,717	0/0:15,0:15:45.14:0,45,655	0/0:29,0:29:84.28:0,84,1256	0/0:27,0:27:78.24:0,78,1143	0/0:15,0:15:45.15:0,45,674	0/0:30,0:30:87.29:0,87,1304	0/0:22,0:22:57.19:0,57,854	0/0:18,0:18:54.17:0,54,788	1/1:0,21:21:60.20:778,60,0	1/1:1,18:19:54.18:700,54,0	1/1:1,19:20:47.66:621,48,0	0/0:13,0:13:36.12:0,36,539	0/0:25,0:25:75.25:0,75,1124	0/0:33,0:33:99:0,99,1482	0/0:1,0:1:3.01:0,3,45
chr10	75131479	.	A	AT	4956.29	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=16.439;DP=562;FS=1.211;HRun=0;HaplotypeScore=84.9265;InbreedingCoeff=0.9471;MQ=80.68;MQ0=0;MQRankSum=-13.596;QD=37.55;ReadPosRankSum=-0.232;VQSLOD=4.6436;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:64.40:921,64,0	0/0:10,0:10:30.10:0,30,420	0/0:21,0:21:57.15:0,57,751	0/0:14,0:14:38.94:0,39,497	0/0:20,0:20:60.16:0,60,802	0/0:24,0:24:69.23:0,69,965	0/0:27,0:27:81.25:0,81,1114	0/0:38,0:37:99:0,108,1478	1/1:1,14:15:5.42:553,5,0	0/0:26,0:26:75.25:0,75,1049	0/0:16,0:16:45.15:0,45,629	1/1:1,16:17:51.16:704,51,0	1/1:1,13:14:42.12:568,42,0	0/0:19,0:19:57.19:0,57,797	0/0:13,0:13:39.13:0,39,545	0/0:24,0:24:72.24:0,72,1007	0/0:24,0:24:72.24:0,72,1007	0/0:14,0:14:42.05:0,42,543	0/0:25,0:25:72.23:0,72,992	0/0:25,0:25:69.23:0,69,959	0/0:17,0:17:48.15:0,48,655	1/1:1,18:19:54.16:741,54,0	1/1:3,15:18:51.11:671,51,0	1/1:1,21:22:55.42:798,55,0	0/0:11,0:11:30.10:0,30,419	0/0:27,0:27:81.27:0,81,1133	0/0:34,0:34:99:0,102,1421	0/0:1,0:1:3.01:0,3,42
chr10	75132730	.	GTTGTTTGT	G	8301.72	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.971;DP=646;FS=1.757;HRun=0;HaplotypeScore=168.2654;InbreedingCoeff=0.9529;MQ=61.67;MQ0=2;MQRankSum=-11.845;QD=37.40;ReadPosRankSum=1.935;VQSLOD=4.7505;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:45.13:0,45,1576	0/0:9,0:9:15.05:0,15,569	0/0:23,0:16:18.03:0,18,516	0/0:41,0:37:49.72:0,50,1812	0/0:23,0:23:60.21:0,60,2453	0/0:31,0:31:75.24:0,75,2892	0/0:29,0:29:60.20:0,60,2225	0/0:33,0:32:54.14:0,54,1747	0/0:21,0:21:51.15:0,51,1871	1/1:8,24:32:69.13:1559,69,0	1/1:3,15:18:27.09:653,27,0	0/0:20,0:20:45.15:0,45,1863	0/0:17,0:17:39.13:0,39,1590	0/0:16,0:16:45.14:0,45,1682	0/0:34,0:34:99:0,99,4031	1/1:8,21:30:45.15:1135,45,0	0/0:24,0:24:66.14:0,66,2333	0/0:16,0:16:36.12:0,36,1444	1/1:14,13:27:41.15:780,41,0	1/1:11,18:30:51.56:1073,52,0	1/1:13,5:18:3.13:149,3,0	0/0:22,0:22:54.19:0,54,2131	0/0:17,0:17:39.12:0,39,1406	0/0:28,0:28:69.21:0,69,2666	1/1:3,6:9:9.03:193,9,0	1/1:6,14:20:42.14:1050,42,0	1/1:11,23:35:60.20:1480,60,0	1/1:0,3:3:9.03:231,9,0
chr10	75133600	.	G	GT	117.21	PASS	AB=0.778;AC=10;AF=0.200;AN=50;BaseQRankSum=6.198;DP=287;FS=2.215;HRun=0;HaplotypeScore=45.0557;InbreedingCoeff=0.6186;MQ=82.51;MQ0=1;MQRankSum=-4.029;QD=3.08;ReadPosRankSum=-1.252;VQSLOD=2.6481;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:1,4:5:8.03:30,0,8	0/0:3,0:3:9.03:0,9,126	0/0:17,0:12:18.05:0,18,238	0/1:20,0:12:16.75:17,0,64	0/0:20,0:20:57.18:0,57,780	0/0:20,0:20:60.17:0,60,805	0/0:6,0:6:18.06:0,18,251	0/0:33,0:33:99:0,99,1358	1/1:1,3:4:8.79:60,9,0	0/0:7,0:7:21.05:0,21,274	0/0:10,0:10:30.06:0,30,397	1/1:1,1:2:2.92:19,3,0	1/1:1,5:6:16.70:116,17,0	0/0:6,0:6:15.04:0,15,193	0/0:10,0:10:30.10:0,30,418	0/0:3,0:3:9.03:0,9,126	0/0:24,0:24:72.24:0,72,1007	0/0:20,0:20:57.19:0,57,797	0/0:13,0:13:39.06:0,39,507	0/0:11,0:11:33.11:0,33,461	./.	1/1:0,1:1:2.94:18,3,0	./.	./.	0/0:9,0:9:27.09:0,27,378	0/0:7,0:7:21.07:0,21,294	0/0:13,0:13:36.12:0,36,503	0/0:16,0:15:45.12:0,45,594
chr10	75133601	.	A	AT	141.59	PASS	AB=0.778;AC=10;AF=0.200;AN=50;BaseQRankSum=6.190;DP=281;FS=2.200;HRun=0;HaplotypeScore=43.2982;InbreedingCoeff=0.6566;MQ=82.88;MQ0=1;MQRankSum=-4.164;QD=3.83;ReadPosRankSum=-0.992;VQSLOD=2.9064;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:1,4:5:2.29:30,0,2	0/0:3,0:3:9.03:0,9,126	0/0:16,0:11:18.06:0,18,240	0/1:18,0:12:16.89:17,0,59	0/0:19,0:19:54.18:0,54,755	0/0:20,0:20:57.18:0,57,780	0/0:6,0:6:18.06:0,18,252	0/0:33,0:33:99:0,99,1361	1/1:0,3:3:8.90:60,9,0	0/0:7,0:7:21.07:0,21,293	0/0:10,0:10:27.09:0,27,374	1/1:1,1:2:2.96:19,3,0	1/1:1,5:6:17.89:139,18,0	0/0:6,0:6:15.04:0,15,195	0/0:10,0:10:30.10:0,30,419	0/0:3,0:3:9.03:0,9,126	0/0:24,0:24:72.24:0,72,1003	0/0:19,0:19:57.19:0,57,794	0/0:13,0:13:39.09:0,39,503	0/0:11,0:11:33.11:0,33,460	./.	1/1:0,1:1:2.94:18,3,0	./.	./.	0/0:9,0:9:27.09:0,27,376	0/0:7,0:7:21.07:0,21,294	0/0:13,0:13:39.11:0,39,527	0/0:14,0:13:39.13:0,39,542
chr10	75134227	.	GAA	G	939.35	PASS	AB=0.835;AC=12;AF=0.214;AN=56;BaseQRankSum=0.765;DP=472;FS=0.557;HRun=15;HaplotypeScore=66.5166;InbreedingCoeff=0.7095;MQ=59.68;MQ0=24;MQRankSum=2.934;QD=7.76;ReadPosRankSum=0.079;VQSLOD=0.4933;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:16:42.12:0,42,545	0/0:6,0:5:14.84:0,15,168	0/1:24,1:10:13.99:14,0,90	0/0:14,0:6:10.57:0,11,105	0/0:16,0:18:40.93:0,41,441	0/0:17,0:21:59.02:0,59,641	0/0:9,0:10:23.41:0,23,222	0/0:34,0:37:88.84:0,89,908	0/0:7,0:8:16.54:0,17,174	0/0:13,0:16:26.65:0,27,164	0/0:10,0:25:46.22:0,46,273	0/0:9,0:9:17.89:0,18,150	0/0:9,0:12:26.09:0,26,301	0/0:11,0:9:20.80:0,21,241	0/0:9,0:9:12.90:0,13,200	0/0:1,0:7:14.97:0,15,52	0/0:29,0:26:62.72:0,63,813	0/0:21,0:22:39.19:0,39,410	0/1:10,7:15:11.28:183,0,11	1/1:10,11:21:7.59:227,8,0	1/1:3,4:7:8.56:79,9,0	0/0:14,0:14:37.18:0,37,392	0/0:16,0:16:41.44:0,41,487	0/0:10,0:9:20.10:0,20,247	0/0:9,0:27:34.21:0,34,175	1/1:5,13:19:37.25:353,37,0	1/1:6,15:20:7.14:175,7,0	1/1:8,1:8:8.94:74,9,0
chr10	75135070	.	T	TCACA	6480.80	PASS	AB=0.619;AC=27;AF=0.500;AN=54;BaseQRankSum=1.963;DP=693;FS=21.857;HRun=0;HaplotypeScore=148.0636;InbreedingCoeff=0.5871;MQ=60.55;MQ0=5;MQRankSum=-1.077;QD=16.45;ReadPosRankSum=-0.553;VQSLOD=3.1183;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,1:23:5.05:78,5,0	0/0:12,0:13:18.05:0,18,266	0/0:28,0:16:14.74:0,15,161	0/0:21,0:15:8.94:0,9,129	0/0:23,0:27:51.15:0,51,753	0/0:23,0:23:45.14:0,45,694	0/0:34,0:35:63.19:0,63,969	0/0:25,0:25:20.90:0,21,335	1/1:6,0:28:43.91:196,44,0	1/1:23,0:22:32.71:433,33,0	./.	0/1:8,1:25:20.37:143,0,20	0/1:8,0:21:21.53:90,0,22	0/0:22,0:23:26.04:0,26,633	0/0:27,0:29:60.13:0,60,922	1/1:20,0:22:12.04:197,12,0	0/0:31,0:31:63.19:0,63,990	0/0:27,0:28:48.21:0,48,727	0/1:14,9:24:5.33:711,0,5	1/1:5,12:20:20.62:445,21,0	1/1:13,25:40:45.15:1053,45,0	0/1:6,0:16:23.28:73,0,23	0/1:7,2:23:55.18:174,0,55	1/1:9,0:29:27.45:123,27,0	1/1:21,0:24:2.99:24,3,0	1/1:12,22:35:78.17:1486,78,0	1/1:8,10:21:20.76:374,21,0	1/1:0,13:14:38.87:880,39,0
chr10	75137379	.	CA	C	5179.07	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.577;DP=573;FS=4.288;HRun=2;HaplotypeScore=64.7040;InbreedingCoeff=0.9883;MQ=78.95;MQ0=0;MQRankSum=-1.613;QD=36.73;ReadPosRankSum=1.828;VQSLOD=5.6196;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:99:1402,108,0	0/0:4,0:4:12.04:0,12,180	0/0:17,0:16:33.17:0,33,590	0/0:20,0:20:57.19:0,57,851	0/0:23,0:23:69.21:0,69,996	0/0:22,0:22:66.22:0,66,989	0/0:28,0:28:81.24:0,81,1189	0/0:30,0:30:90.29:0,90,1314	1/1:0,19:19:57.19:740,57,0	0/0:12,0:12:33.10:0,33,460	0/0:18,0:18:54.18:0,54,801	1/1:0,22:22:57.19:740,57,0	1/1:0,18:18:51.17:662,51,0	0/0:24,0:24:72.24:0,72,1078	0/0:28,0:28:81.27:0,81,1214	0/0:17,0:17:51.17:0,51,762	0/0:31,0:31:93.30:0,93,1370	0/0:35,0:35:99:0,105,1530	0/0:27,0:27:78.26:0,78,1168	0/0:8,0:8:24.07:0,24,338	0/0:24,0:24:72.24:0,72,1078	1/1:1,15:16:45.15:584,45,0	1/1:0,13:13:39.13:506,39,0	1/1:0,15:15:42.14:545,42,0	0/0:10,0:10:30.10:0,30,449	0/0:21,0:21:63.20:0,63,914	0/0:29,0:28:87.25:0,87,1277	0/0:4,0:4:12.04:0,12,180
chr10	75137577	.	G	GT	5571.86	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-0.080;DP=585;FS=3.192;HRun=2;HaplotypeScore=63.8494;InbreedingCoeff=0.9997;MQ=80.64;MQ0=0;MQRankSum=-2.134;QD=37.40;ReadPosRankSum=3.115;VQSLOD=5.6247;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:81.27:1166,81,0	0/0:13,0:13:36.11:0,36,446	0/0:17,0:17:45.11:0,45,519	0/0:14,0:14:32.99:0,33,369	0/0:25,0:25:75.20:0,75,911	0/0:18,0:18:54.08:0,54,623	0/0:21,0:21:63.20:0,63,780	0/0:28,0:28:84.26:0,84,1030	1/1:2,18:20:51.17:734,51,0	0/0:21,0:21:63.18:0,63,753	0/0:21,0:21:54.15:0,54,645	1/1:1,18:19:51.17:734,51,0	1/1:1,17:18:48.16:691,48,0	0/0:25,0:25:75.23:0,75,925	0/0:18,0:18:54.16:0,54,659	0/0:10,0:10:30.08:0,30,359	0/0:20,0:20:57.18:0,57,706	0/0:23,0:23:69.17:0,69,838	0/0:19,0:19:51.16:0,51,631	0/0:21,0:21:60.17:0,60,730	0/0:32,0:32:90.25:0,90,1078	1/1:1,17:18:48.16:691,48,0	1/1:0,22:22:57.19:821,57,0	1/1:1,21:22:51.17:734,51,0	0/0:20,0:20:57.04:0,57,684	0/0:26,0:26:78.25:0,78,967	0/0:34,0:34:99:0,99,1179	0/0:10,0:10:30.07:0,30,356
chr10	75138069	.	TGTAC	T	8343.51	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.802;DP=755;FS=1.457;HRun=0;HaplotypeScore=128.0490;InbreedingCoeff=0.9998;MQ=77.59;MQ0=0;MQRankSum=-5.168;QD=43.91;ReadPosRankSum=4.023;VQSLOD=5.6174;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,50:51:99:2077,114,0	0/0:11,0:11:33.11:0,33,895	0/0:39,0:36:99:0,99,2243	0/0:35,0:34:77.94:0,78,1757	0/0:34,0:34:99:0,99,2670	0/0:29,0:29:81.26:0,81,2148	0/0:31,0:31:93.32:0,93,2473	0/0:27,0:27:75.26:0,75,1966	1/1:1,30:31:75.17:1377,75,0	0/0:28,0:28:81.27:0,81,2138	0/0:23,0:23:69.24:0,69,1847	1/1:0,28:28:75.04:1244,75,0	1/1:0,23:24:66.18:1220,66,0	0/0:15,0:15:45.14:0,45,1154	0/0:22,0:22:66.23:0,66,1758	0/0:20,0:20:60.21:0,60,1611	0/0:35,0:35:99:0,102,2640	0/0:22,0:22:66.23:0,66,1724	0/0:10,0:10:30.10:0,30,821	0/0:35,0:35:99:0,105,2676	0/0:39,0:39:99:0,117,3115	1/1:0,18:18:51.13:913,51,0	1/1:2,16:18:45.02:756,45,0	1/1:0,20:20:39.13:756,39,0	0/0:21,0:21:63.20:0,63,1636	0/0:44,0:44:99:0,132,3560	0/0:34,0:34:99:0,102,2715	0/0:11,0:11:33.11:0,33,826
chr10	75138360	.	C	CT	2843.96	PASS	AB=0.726;AC=19;AF=0.339;AN=56;BaseQRankSum=-9.869;DP=494;FS=0.414;HRun=11;HaplotypeScore=55.1695;InbreedingCoeff=0.6731;MQ=66.98;MQ0=0;MQRankSum=2.181;QD=14.51;ReadPosRankSum=-0.747;VQSLOD=3.5226;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:30:54.99:0,55,159	0/0:7,0:8:16.97:0,17,122	0/1:17,1:17:25.36:25,0,178	0/0:9,0:8:14.77:0,15,106	0/0:22,0:23:52.81:0,53,398	0/0:18,0:19:37.86:0,38,282	0/0:16,0:17:43.81:0,44,324	0/0:33,0:33:50.60:0,51,521	0/0:15,0:15:41.80:0,42,319	1/1:6,10:16:29.99:287,30,0	1/1:3,12:15:18.43:243,18,0	0/0:10,0:10:17.90:0,18,139	0/0:15,0:18:36.93:0,37,265	0/0:15,0:15:37.76:0,38,271	0/0:23,0:24:58.79:0,59,443	1/1:0,9:9:24.05:244,24,0	0/0:23,0:24:61.80:0,62,470	0/0:21,0:21:56.68:0,57,429	1/1:5,12:19:44.55:410,45,0	0/1:3,9:12:2.23:151,0,2	1/1:4,16:22:35.74:333,36,0	0/1:11,1:12:0.56:1,0,179	0/0:11,0:12:25.94:0,26,190	0/0:19,0:20:46.80:0,47,346	0/1:2,8:10:12.88:186,0,13	1/1:7,18:25:57.06:560,57,0	0/1:8,11:19:10.40:268,0,10	1/1:3,16:19:33.07:335,33,0
chr10	75139152	.	CTGTGTGTGTGTGTG	C	685.52	PASS	AB=0.974;AC=9;AF=0.188;AN=48;BaseQRankSum=3.941;DP=592;FS=8.169;HRun=0;HaplotypeScore=206.2000;InbreedingCoeff=0.6078;MQ=58.62;MQ0=10;MQRankSum=-2.337;QD=6.79;ReadPosRankSum=-0.034;VQSLOD=1.5727;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:38:24.55:0,25,1072	0/0:6,0:6:9.01:0,9,173	./.	./.	0/0:16,0:16:12.04:0,12,685	0/0:20,0:20:28.04:0,28,1540	0/0:22,0:22:9.03:0,9,544	0/0:25,0:24:7.53:0,8,123	1/1:15,4:18:9.03:349,9,0	0/0:17,0:17:11.47:0,11,204	0/0:14,0:14:15.05:0,15,391	1/1:18,2:20:3.01:117,3,0	1/1:16,1:17:3.01:116,3,0	0/0:15,0:14:27.09:0,27,1023	0/0:20,0:19:13.54:0,14,833	0/0:16,0:19:15.05:0,15,382	0/0:24,0:26:21.07:0,21,1029	0/0:18,0:18:21.91:0,22,940	0/0:18,0:17:18.06:0,18,1133	0/0:16,0:16:9.03:0,9,555	0/0:63,0:62:54.19:0,54,3096	1/1:5,3:8:5.23:123,5,0	./.	0/1:36,1:37:99:110,0,114	0/0:10,0:11:12.03:0,12,222	0/0:21,0:21:29.59:0,30,1614	0/0:24,0:23:26.77:0,27,1086	./.
chr10	75139425	.	TA	T	2474.08	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.068;DP=518;FS=4.297;HRun=10;HaplotypeScore=63.1642;InbreedingCoeff=0.9709;MQ=69.69;MQ0=2;MQRankSum=-0.916;QD=20.79;ReadPosRankSum=1.516;VQSLOD=4.8358;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:23:51.17:0,51,256	0/0:10,0:10:27.07:0,27,298	0/0:10,0:8:13.96:0,14,110	0/0:10,0:8:5.95:0,6,65	0/0:21,1:23:21.89:0,22,444	0/0:24,0:24:63.16:0,63,689	0/0:12,0:12:33.09:0,33,365	0/0:43,0:43:96.24:0,96,1048	0/0:3,0:18:34.12:0,34,171	0/0:26,1:27:34.12:0,34,605	0/0:16,0:16:33.09:0,33,365	0/0:1,0:11:28.41:0,28,142	0/0:2,0:17:39.57:0,40,197	0/0:16,0:16:41.76:0,42,426	0/0:13,0:13:36.09:0,36,390	0/0:18,0:18:36.10:0,36,397	0/0:29,1:30:58.19:0,58,870	0/0:16,0:16:48.11:0,48,521	1/1:1,30:31:89.94:772,90,0	1/1:1,15:16:44.99:390,45,0	1/1:1,15:16:35.99:313,36,0	0/0:3,0:12:25.99:0,26,158	0/0:3,0:17:31.40:0,31,167	0/0:4,0:11:23.04:0,23,136	0/0:22,0:22:66.18:0,66,730	1/1:3,17:20:17.79:379,18,0	1/1:3,17:20:44.99:391,45,0	1/1:0,16:16:47.99:417,48,0
chr10	75140047	.	AATCT	A	2961.94	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.400;DP=459;FS=30.855;HRun=0;HaplotypeScore=77.3137;InbreedingCoeff=0.9432;MQ=68.06;MQ0=2;MQRankSum=0.403;QD=45.57;ReadPosRankSum=4.379;VQSLOD=2.1825;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:33.11:0,33,811	0/0:2,0:2:6.02:0,6,156	0/0:24,0:21:49.98:0,50,1156	0/0:12,0:12:30.10:0,30,624	0/0:13,0:13:39.12:0,39,917	0/0:16,0:16:48.16:0,48,1238	0/0:19,0:19:54.19:0,54,1362	0/0:27,0:27:72.24:0,72,1751	0/0:8,0:8:24.07:0,24,542	1/1:1,19:20:57.20:1020,57,0	1/1:2,17:19:48.16:862,48,0	0/0:21,0:21:57.18:0,57,1412	0/0:14,0:14:39.13:0,39,976	0/0:21,0:21:60.19:0,60,1503	0/0:24,0:24:60.21:0,60,1496	1/1:0,16:16:45.15:808,45,0	0/0:26,0:25:63.20:0,63,1551	0/0:17,0:17:48.11:0,48,1187	0/0:11,0:11:27.09:0,27,635	0/0:19,0:19:51.18:0,51,1325	0/0:10,0:10:30.10:0,30,747	0/0:14,0:14:39.13:0,39,986	0/0:13,0:13:39.13:0,39,952	0/0:13,0:13:30.10:0,30,779	1/1:1,9:10:24.08:431,24,0	0/0:19,1:20:6.28:0,6,1382	0/0:23,0:23:66.23:0,66,1677	0/0:11,0:11:30.10:0,30,643
chr10	75140105	.	AAG	A	408.73	PASS	AB=0.920;AC=14;AF=0.318;AN=44;BaseQRankSum=2.110;DP=463;FS=31.076;HRun=0;HaplotypeScore=66.8791;InbreedingCoeff=0.2480;MQ=61.88;MQ0=13;MQRankSum=0.130;QD=2.74;ReadPosRankSum=-0.588;VQSLOD=-0.0222;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:9,0:9:5.56:30,6,0	./.	./.	0/0:14,0:14:0:0,0,0	0/0:21,0:21:3.01:0,3,37	0/0:13,0:13:6.01:0,6,67	0/0:23,0:22:1.25:0,1,3	0/1:17,0:17:20.37:20,0,78	1/1:15,0:14:8.84:71,9,0	./.	0/0:24,0:23:20.74:0,21,192	0/0:14,0:13:8.75:0,9,110	1/1:11,1:12:3:28,3,0	1/1:19,0:20:11.85:104,12,0	1/1:10,1:10:6.02:64,6,0	0/1:22,2:23:18.88:132,0,19	0/1:17,7:25:71.13:76,0,71	0/1:14,0:14:19.80:20,0,85	./.	0/0:15,0:15:9.01:0,9,97	0/0:18,0:16:2.94:0,3,18	./.	0/0:18,0:19:0.88:0,1,127	0/0:12,0:12:14.93:0,15,153	0/0:13,0:13:12.92:0,13,152	0/0:18,0:18:2.84:0,3,21	0/0:12,0:12:2.99:0,3,24
chr10	75140492	.	GAGTT	G	6189.04	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.714;DP=555;FS=1.771;HRun=0;HaplotypeScore=90.1290;InbreedingCoeff=0.9981;MQ=86.45;MQ0=0;MQRankSum=-3.575;QD=40.45;ReadPosRankSum=5.096;VQSLOD=5.2000;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,32:40:78.27:1398,78,0	0/0:7,0:7:17.98:0,18,407	0/0:21,0:21:53.97:0,54,1264	0/0:18,0:18:40.02:0,40,972	0/0:20,0:20:60.21:0,60,1532	0/0:14,0:14:42.14:0,42,1091	0/0:19,0:19:51.18:0,51,1257	0/0:27,0:26:63.22:0,63,1613	1/1:1,19:20:42.14:754,42,0	0/0:23,0:23:60.21:0,60,1532	0/0:17,0:17:48.16:0,48,1220	1/1:1,19:20:48.16:862,48,0	1/1:2,19:21:54.19:969,54,0	0/0:27,0:27:75.25:0,75,1864	0/0:21,0:21:63.22:0,63,1576	0/0:21,0:21:57.17:0,57,1317	0/0:20,0:20:54.19:0,54,1390	0/0:23,0:23:63.19:0,63,1555	0/0:25,0:25:57.20:0,57,1446	0/0:10,0:10:27.09:0,27,672	0/0:23,0:23:66.21:0,66,1576	1/1:3,11:14:27.09:485,27,0	1/1:0,14:14:39.13:699,39,0	1/1:2,22:24:57.20:1023,57,0	0/0:13,0:13:39.13:0,39,958	0/0:20,0:20:57.19:0,57,1430	0/0:17,0:17:42.14:0,42,1091	0/0:16,0:16:45.15:0,45,1167
chr10	75140676	.	AGAGAGG	A	640.81	PASS	AB=1.000;AC=12;AF=0.222;AN=54;BaseQRankSum=4.036;DP=348;FS=0.000;HRun=0;HaplotypeScore=75.2064;InbreedingCoeff=0.6066;MQ=59.40;MQ0=10;MQRankSum=1.401;QD=12.09;ReadPosRankSum=0.467;VQSLOD=2.0979;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:24.05:0,24,608	0/0:3,0:2:3.01:0,3,50	0/0:45,0:14:10.95:0,11,262	0/0:39,0:10:14.48:0,14,315	0/0:8,0:8:24.08:0,24,620	0/0:6,0:6:12.04:0,12,322	0/0:19,0:18:36.08:0,36,805	0/0:13,0:13:30.07:0,30,565	0/0:13,0:13:35.64:0,36,740	1/1:4,6:10:15:191,15,0	1/1:7,0:6:9.03:149,9,0	0/0:15,0:15:26.28:0,26,576	0/0:13,0:12:21:0,21,438	0/0:15,0:15:27.09:0,27,840	0/0:18,0:17:45.12:0,45,1260	1/1:10,0:11:14.95:182,15,0	0/0:14,0:14:36.01:0,36,729	0/0:9,0:9:16.86:0,17,407	0/0:3,0:2:2.94:0,3,18	1/1:2,0:2:3:26,3,0	0/1:10,0:9:17.23:17,0,30	0/0:16,0:16:33.11:0,33,927	0/0:8,0:8:17.99:0,18,356	0/0:15,0:15:28.65:0,29,686	1/1:7,0:7:9.81:196,10,0	0/0:2,0:1:2.96:0,3,19	0/1:6,0:5:40.68:41,0,63	./.
chr10	75140712	.	GGAGAGAGAGAGAGAGAGAGAGAGA	G	1039.93	PASS	AB=1.000;AC=9;AF=0.196;AN=46;BaseQRankSum=1.594;DP=268;FS=3.488;HRun=0;HaplotypeScore=128.0984;InbreedingCoeff=0.5827;MQ=45.87;MQ0=26;MQRankSum=-3.054;QD=23.11;ReadPosRankSum=0.730;VQSLOD=2.1957;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:10:6.02:166,6,0	0/0:4,0:3:3.01:0,3,147	./.	./.	0/0:14,0:10:6.02:0,6,227	0/0:8,0:6:10.85:0,11,710	0/0:12,0:10:18.52:0,19,1037	0/0:24,0:22:51.11:0,51,2270	1/1:7,4:10:6.02:376,6,0	0/0:12,0:10:21.04:0,21,1022	0/0:8,0:7:6.02:0,6,420	1/1:8,0:8:9.03:433,9,0	1/1:6,0:6:3.01:188,3,0	0/0:19,0:18:30.10:0,30,2238	0/0:18,0:16:33.09:0,33,1680	0/0:3,0:3:3.01:0,3,290	0/0:17,0:17:25.02:0,25,1574	0/0:8,0:7:15.05:0,15,934	0/0:3,0:2:6.02:0,6,245	0/0:2,0:1:3.01:0,3,140	0/0:10,0:7:8.88:0,9,392	./.	./.	0/1:6,0:5:0:0,0,0	0/0:15,0:15:12.04:0,12,919	0/0:7,0:5:15.05:0,15,852	0/0:3,0:3:5.46:0,5,434	./.
chr10	75140970	.	CTTAAGAAATTTT	C	10962.95	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.532;DP=514;FS=1.914;HRun=0;HaplotypeScore=175.4538;InbreedingCoeff=0.9850;MQ=64.50;MQ0=0;MQRankSum=-14.560;QD=81.81;ReadPosRankSum=3.512;VQSLOD=4.9404;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:66.23:2416,66,0	0/0:5,0:5:15.05:0,15,910	0/0:15,0:14:30.09:0,30,1056	0/0:3,0:3:9.03:0,9,248	0/0:19,0:19:57.20:0,57,3479	0/0:19,0:19:51.13:0,51,2842	0/0:15,0:15:45.14:0,45,2454	0/0:40,0:39:99:0,111,5831	1/1:1,16:17:42.14:1572,42,0	0/0:24,0:24:72.25:0,72,4066	0/0:13,0:13:39.13:0,39,2419	1/1:2,21:23:45.15:1710,45,0	1/1:3,19:22:48.16:1823,48,0	0/0:17,0:17:45.15:0,45,2594	0/0:21,0:21:60.21:0,60,3658	0/0:13,0:13:39.13:0,39,2373	0/0:19,0:19:54.15:0,54,2687	0/0:15,0:15:45.15:0,45,2737	0/0:21,0:21:60.19:0,60,3173	0/0:15,0:15:42.14:0,42,2597	0/0:9,0:9:24.08:0,24,1277	1/1:1,13:14:33.11:1162,33,0	1/1:4,15:19:39.13:1482,39,0	1/1:1,10:11:21.07:798,21,0	0/0:37,0:37:99:0,111,6605	0/0:26,0:26:75.26:0,75,4483	0/0:26,0:25:78.27:0,78,4598	0/0:8,0:8:24.08:0,24,1489
chr10	75143713	.	AT	A	1405.96	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.193;DP=471;FS=0.000;HRun=9;HaplotypeScore=55.5455;InbreedingCoeff=0.9081;MQ=72.56;MQ0=0;MQRankSum=0.499;QD=19.26;ReadPosRankSum=1.761;VQSLOD=3.7924;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:86.39:0,86,557	0/0:6,0:6:18.05:0,18,207	0/0:13,0:13:29.49:0,29,300	0/0:6,0:6:13.58:0,14,136	0/0:21,0:21:51.15:0,51,587	0/0:11,1:12:5.63:0,6,316	0/0:15,0:15:39.12:0,39,449	0/0:27,0:27:70.45:0,70,796	0/0:10,0:10:29.33:0,29,186	1/1:3,14:17:42.02:384,42,0	1/1:2,23:25:66.03:604,66,0	0/0:10,0:10:26.61:0,27,171	0/0:6,0:6:16.40:0,16,106	0/0:12,0:12:36.11:0,36,415	0/0:19,0:19:54.12:0,54,608	1/1:2,16:18:42.01:384,42,0	0/0:25,0:25:66.20:0,66,762	0/0:10,1:11:2.63:0,3,283	0/0:29,0:29:69.19:0,69,786	0/0:16,0:16:45.13:0,45,518	0/0:17,0:17:51.13:0,51,574	0/0:13,0:13:38.49:0,38,254	0/0:8,0:8:19.31:0,19,121	0/0:17,0:17:41.53:0,42,281	1/1:5,8:13:21:192,21,0	0/0:19,0:19:54.16:0,54,623	0/0:29,0:28:78.19:0,78,868	0/0:22,0:22:61.05:0,61,683
chr10	75144604	.	GTCTGTCTGTCTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	G	11776.84	PASS	AB=1.000;AC=28;AF=0.519;AN=54;BaseQRankSum=12.527;DP=674;FS=26.228;HRun=0;HaplotypeScore=434.5629;InbreedingCoeff=0.6251;MQ=52.80;MQ0=15;MQRankSum=-3.490;QD=29.08;ReadPosRankSum=0.797;VQSLOD=1.7680;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:99:151,0,272	0/0:5,0:5:11.90:0,12,1418	0/0:35,0:10:26.08:0,26,626	0/0:37,0:22:27.45:0,27,889	0/0:15,0:14:33.07:0,33,1489	0/0:22,0:22:45.15:0,45,4806	0/0:18,0:16:39.12:0,39,2553	0/0:34,0:33:78.21:0,78,3525	1/1:25,0:25:9.03:505,9,0	1/1:1,27:27:57.96:1201,58,0	1/1:0,24:24:9.03:858,9,0	0/1:34,0:33:28.93:825,0,29	1/1:33,0:33:8.51:520,9,0	0/0:16,0:14:36.12:0,36,4167	0/0:16,0:16:42.12:0,42,4785	1/1:0,24:24:9.03:940,9,0	0/0:33,0:30:87.09:0,87,9532	0/0:27,0:26:69.21:0,69,7532	1/1:8,16:21:44.73:964,45,0	1/1:1,25:26:24.08:1062,24,0	1/1:17,0:17:8.30:206,8,0	0/1:21,0:21:30.66:149,0,31	./.	0/1:33,0:33:37.97:164,0,38	1/1:1,24:25:6.02:644,6,0	1/1:1,34:35:90.75:2567,91,0	1/1:13,0:13:21.05:377,21,0	1/1:1,11:11:6.02:643,6,0
chr10	75144608	.	GTCTGTCTGTCTCTCTCTCTCTCTCTCTCTCTCTCTC	G	9914.41	PASS	AB=0.525;AC=31;AF=0.574;AN=54;BaseQRankSum=12.844;DP=654;FS=17.211;HRun=0;HaplotypeScore=372.4414;InbreedingCoeff=0.7599;MQ=51.46;MQ0=15;MQRankSum=-4.017;QD=25.29;ReadPosRankSum=2.564;VQSLOD=1.9151;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:3,29:32:99:258,0,219	0/0:5,0:5:11.85:0,12,1148	0/0:33,0:9:14.85:0,15,328	0/0:32,0:19:17.21:0,17,410	0/0:13,0:12:20.89:0,21,818	0/0:23,0:23:48.16:0,48,4120	0/0:19,0:17:39.11:0,39,2055	0/0:32,0:31:86.99:0,87,2393	1/1:0,25:25:9.03:824,9,0	1/1:28,0:27:20.28:588,20,0	1/1:24,0:24:9.03:647,9,0	1/1:2,30:31:15.05:1373,15,0	1/1:0,32:32:8.59:839,9,0	0/0:16,0:14:36.12:0,36,3498	0/0:15,0:15:36.12:0,36,3924	1/1:24,0:24:9.03:728,9,0	0/0:34,0:31:87.13:0,87,8011	0/0:27,0:25:71.04:0,71,6340	1/1:21,0:18:0.32:462,0,0	1/1:26,0:26:21.02:630,21,0	1/1:12,0:12:4.57:84,5,0	1/1:0,21:21:9.03:436,9,0	./.	1/1:4,29:33:3.01:280,3,0	1/1:24,0:24:6.02:503,6,0	1/1:34,0:34:78.17:1526,78,0	1/1:12,0:12:18.06:236,18,0	1/1:12,0:11:6.02:502,6,0
chr10	75144610	.	CTGTCTG	C	1999.41	PASS	AB=1.000;AC=34;AF=0.630;AN=54;BaseQRankSum=11.280;DP=642;FS=20.411;HRun=0;HaplotypeScore=180.2883;InbreedingCoeff=0.6651;MQ=49.51;MQ0=15;MQRankSum=-6.392;QD=4.75;ReadPosRankSum=2.343;VQSLOD=0.8797;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:5.23:39,5,0	0/0:5,0:5:12.04:0,12,180	0/0:31,0:8:14.85:0,15,232	0/0:29,0:16:16.95:0,17,213	0/0:13,0:12:2.24:0,2,74	0/0:23,0:23:23.69:0,24,830	0/1:19,0:17:8.74:9,0,478	0/0:31,0:30:56.91:0,57,814	1/1:25,0:25:9.03:133,9,0	1/1:28,0:27:20.77:197,21,0	1/1:24,0:24:6.02:76,6,0	1/1:31,0:30:15.02:212,15,0	1/1:32,0:32:9.03:143,9,0	0/1:16,0:14:6.89:7,0,786	0/0:14,0:14:36.12:0,36,827	1/1:24,0:24:8.92:100,9,0	0/0:34,0:31:89.96:0,90,1774	0/0:27,0:25:60.81:0,61,1145	1/1:21,0:18:14.85:157,15,0	1/1:26,0:26:7.84:79,8,0	1/1:11,0:11:9.47:92,9,0	1/1:21,0:21:3.01:32,3,0	./.	1/1:31,0:31:3.01:47,3,0	1/1:24,0:24:6.02:84,6,0	1/1:34,0:34:41.97:467,42,0	1/1:11,0:11:18.06:236,18,0	1/1:12,0:11:6.02:84,6,0
chr10	75144614	.	CTG	C	704.71	PASS	AB=0.944;AC=36;AF=0.643;AN=56;BaseQRankSum=8.928;DP=636;FS=19.326;HRun=0;HaplotypeScore=155.9470;InbreedingCoeff=0.5111;MQ=48.40;MQ0=15;MQRankSum=-4.509;QD=1.60;ReadPosRankSum=1.819;VQSLOD=1.3780;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:0.99:5,1,0	0/1:6,0:6:6.95:7,0,91	0/0:28,0:7:7.99:0,8,112	0/0:23,0:10:8.50:0,9,81	1/1:14,0:13:4.66:151,5,0	0/1:25,0:25:18.68:19,0,353	0/1:15,6:19:8.39:8,0,206	0/0:29,0:28:38.76:0,39,341	1/1:25,0:25:8.62:46,9,0	1/1:28,0:27:8.75:52,9,0	1/1:24,0:24:5.74:30,6,0	1/1:31,0:30:11.05:56,11,0	1/1:32,0:32:8.52:42,9,0	0/0:17,0:15:36.43:0,36,402	0/0:15,0:15:15.08:0,15,378	1/1:24,0:24:5.68:28,6,0	0/0:36,0:33:74.75:0,75,782	0/0:26,0:24:46.42:0,46,531	1/1:20,0:18:5.71:34,6,0	1/1:26,0:26:7.96:37,8,0	1/1:9,0:8:3.44:21,3,0	0/0:21,0:21:0.89:0,1,2	0/1:14,0:14:0:0,0,0	1/1:30,0:30:2.84:14,3,0	1/1:24,0:24:5.68:28,6,0	1/1:34,0:34:26.29:159,26,0	1/1:11,0:11:17.77:117,18,0	1/1:12,0:11:5.72:29,6,0
chr10	75145169	.	T	TAA	5558.87	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=0.276;DP=537;FS=2.512;HRun=13;HaplotypeScore=85.4255;InbreedingCoeff=0.8915;MQ=75.45;MQ0=1;MQRankSum=-1.173;QD=16.45;ReadPosRankSum=-2.225;VQSLOD=3.7554;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,3:13:18:207,18,0	0/0:7,0:9:14.52:0,15,162	0/1:26,0:15:12.08:12,0,14	0/0:22,0:13:20.17:0,20,152	0/0:21,0:24:38.17:0,38,358	0/0:23,0:24:47.53:0,48,403	0/0:13,0:13:20.80:0,21,185	0/0:25,0:28:19.56:0,20,291	1/1:5,6:13:30.02:344,30,0	1/1:4,0:18:27.82:109,28,0	1/1:8,0:21:28.82:142,29,0	1/1:8,7:16:42.08:487,42,0	1/1:6,6:12:24.06:308,24,0	0/0:12,0:12:29.67:0,30,242	0/0:17,0:17:32.84:0,33,290	1/1:1,1:19:37.94:162,38,0	0/0:24,0:30:19.99:0,20,362	0/0:18,0:18:41.92:0,42,370	1/1:4,11:16:41.95:419,42,0	1/1:10,21:32:57.10:622,57,0	1/1:1,2:5:8.50:73,8,0	1/1:7,14:21:32.95:380,33,0	1/1:16,9:25:42.07:479,42,0	1/1:6,5:11:27.07:335,27,0	1/1:4,0:19:4.02:69,4,0	1/1:10,16:30:56.39:549,56,0	1/1:4,20:27:47.64:617,48,0	1/1:2,12:14:18.06:245,18,0
chr10	75145247	.	T	TA	2610.35	PASS	AB=0.619;AC=13;AF=0.232;AN=56;BaseQRankSum=-7.474;DP=497;FS=2.595;HRun=9;HaplotypeScore=50.4208;InbreedingCoeff=0.8761;MQ=73.42;MQ0=0;MQRankSum=-2.418;QD=23.52;ReadPosRankSum=1.542;VQSLOD=4.5259;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:42.11:464,42,0	0/0:8,0:8:20.99:0,21,182	0/0:15,0:15:26.97:0,27,234	0/0:7,0:7:8.98:0,9,78	0/0:23,0:23:65.97:0,66,569	0/0:24,0:24:65.96:0,66,569	0/0:14,0:14:41.99:0,42,365	0/0:33,0:33:80.95:0,81,698	1/1:1,10:11:30.08:332,30,0	0/0:21,0:21:53.97:0,54,469	0/0:21,0:21:59.99:0,60,521	1/1:2,23:25:63.17:697,63,0	1/1:1,19:20:48.13:531,48,0	0/0:8,0:8:20.99:0,21,182	0/0:17,0:17:44.98:0,45,391	0/0:19,1:20:20.76:0,21,400	0/0:35,0:35:98.82:0,99,836	0/0:19,0:19:50.97:0,51,443	0/0:19,0:19:53.96:0,54,463	0/0:16,0:16:41.98:0,42,362	0/0:9,0:9:26.99:0,27,234	0/1:5,8:13:16.03:281,0,16	1/1:4,12:16:10.02:327,10,0	1/1:3,6:9:15.04:166,15,0	0/0:20,0:20:53.99:0,54,469	0/0:29,0:29:74.97:0,75,651	0/0:18,0:18:41.89:0,42,360	0/0:9,0:9:26.99:0,27,234
chr10	75147149	.	CTTCTTT	C	2079.91	PASS	AB=0.997;AC=24;AF=0.429;AN=56;BaseQRankSum=7.330;DP=476;FS=0.969;HRun=0;HaplotypeScore=88.6416;InbreedingCoeff=0.2773;MQ=65.35;MQ0=17;MQRankSum=-3.600;QD=7.20;ReadPosRankSum=2.575;VQSLOD=1.1861;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,1:24:52.09:465,52,0	0/0:7,0:7:17.03:0,17,251	0/1:30,0:12:2.94:3,0,86	0/0:16,0:6:11:0,11,60	0/0:38,0:36:77.03:0,77,1309	0/0:20,0:19:51.04:0,51,817	0/0:10,0:12:14.51:0,15,336	0/0:18,0:18:38.97:0,39,408	1/1:1,10:10:3.01:65,3,0	0/1:20,0:19:23.16:23,0,331	0/1:18,0:18:71.47:71,0,179	1/1:10,0:10:25.96:230,26,0	1/1:10,0:10:26.60:230,27,0	0/0:15,0:15:32.93:0,33,530	0/0:14,0:14:36.92:0,37,641	0/1:11,0:11:19.15:19,0,98	0/1:18,0:18:2.93:3,0,866	0/0:19,0:15:36.03:0,36,640	0/1:14,0:14:41.02:41,0,178	0/1:30,0:30:73.46:73,0,392	0/0:6,0:5:14.90:0,15,113	1/1:12,0:13:30.03:284,30,0	1/1:9,0:10:26.28:202,26,0	1/1:11,0:12:29.25:271,29,0	0/1:26,0:25:99:124,0,208	0/0:20,0:20:45.09:0,45,379	0/1:22,0:22:99:121,0,228	0/1:8,0:8:45.80:46,0,71
chr10	75148144	.	CGTTCTG	C	6877.40	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=1.613;DP=679;FS=12.173;HRun=0;HaplotypeScore=172.4632;InbreedingCoeff=0.9991;MQ=88.97;MQ0=0;MQRankSum=-15.193;QD=49.48;ReadPosRankSum=0.399;VQSLOD=3.9714;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:24.08:563,24,0	0/0:9,0:9:24.08:0,24,830	0/0:33,0:33:79.15:0,79,2503	0/0:21,0:21:60.16:0,60,1562	0/0:26,0:26:66.21:0,66,2154	0/0:34,0:34:99:0,99,3376	0/0:18,0:18:54.19:0,54,1889	0/0:40,0:40:99:0,102,3448	1/1:3,25:28:72.25:1699,72,0	0/0:32,0:32:93.32:0,93,2618	0/0:21,0:21:57.20:0,57,1665	1/1:3,15:18:42.14:988,42,0	1/1:4,13:17:33.11:779,33,0	0/0:26,0:26:78.27:0,78,2734	0/0:28,0:28:81.26:0,81,2722	0/0:19,0:19:57.18:0,57,1609	0/0:27,0:27:72.25:0,72,2482	0/0:11,0:11:33.11:0,33,1153	0/0:27,0:27:72.23:0,72,1952	0/0:27,0:27:78.25:0,78,2212	0/0:34,0:34:96.33:0,96,2793	1/1:0,18:18:51.13:1150,51,0	1/1:2,21:23:42.14:990,42,0	1/1:3,16:19:30.10:708,30,0	0/0:17,0:17:48.16:0,48,1405	0/0:37,0:36:99:0,105,3023	0/0:37,0:37:99:0,111,3282	0/0:16,0:16:48.16:0,48,1409
chr10	75148568	.	CTTT	C	2232.65	PASS	AB=0.701;AC=16;AF=0.286;AN=56;BaseQRankSum=3.883;DP=494;FS=16.212;HRun=13;HaplotypeScore=115.0404;InbreedingCoeff=0.5698;MQ=69.02;MQ0=13;MQRankSum=-1.751;QD=12.91;ReadPosRankSum=8.326;VQSLOD=-0.1232;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:32,2:33:36.85:480,37,0	0/0:17,0:18:44.27:0,44,604	0/0:30,0:13:21.33:0,21,275	0/0:39,0:16:13.49:0,13,130	0/0:18,0:17:39:0,39,509	0/0:18,0:18:45.40:0,45,598	0/0:12,0:10:23.98:0,24,318	0/0:26,0:27:55.55:0,56,635	1/1:7,2:9:21.59:191,22,0	1/1:17,11:27:24.08:528,24,0	0/1:15,9:24:30.96:366,0,31	1/1:7,0:7:11.96:114,12,0	0/1:4,7:11:16.07:26,0,16	0/0:7,0:7:20.99:0,21,263	0/0:11,0:12:24:0,24,331	0/1:8,7:16:21.66:268,0,22	0/0:21,0:22:50.01:0,50,641	0/0:17,0:17:36.04:0,36,507	0/0:20,0:23:49.59:0,50,424	0/0:10,0:16:30.19:0,30,219	0/0:4,0:3:5.94:0,6,41	1/1:4,0:4:2.94:19,3,0	1/1:10,1:11:10.55:95,11,0	0/0:1,6:6:0.47:0,0,1	0/1:21,7:26:44.24:328,0,44	0/0:10,0:11:27.78:0,28,233	0/0:18,0:19:32.04:0,32,214	0/0:9,0:15:26.90:0,27,214
chr10	75148575	.	T	TTTTC	3074.87	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=7.138;DP=540;FS=24.497;HRun=0;HaplotypeScore=145.1711;InbreedingCoeff=0.6151;MQ=63.03;MQ0=17;MQRankSum=-4.978;QD=16.36;ReadPosRankSum=6.189;VQSLOD=1.4939;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:32:58.97:107,0,59	0/0:16,0:16:45.19:0,45,487	0/0:36,0:14:26.06:0,26,289	0/0:52,0:19:8.60:0,9,165	0/0:22,0:21:51.24:0,51,499	0/0:20,0:20:48.74:0,49,560	0/0:12,0:10:27.02:0,27,339	0/0:31,0:29:76.66:0,77,714	1/1:8,0:8:11.85:94,12,0	1/1:24,3:25:61.31:885,61,0	1/1:18,4:21:44.44:616,44,0	1/1:5,0:5:10.94:73,11,0	0/1:9,0:9:1.52:2,0,29	0/0:7,0:7:20.97:0,21,224	0/0:11,0:11:23.92:0,24,282	1/1:14,3:15:34.85:462,35,0	0/0:23,0:22:57.75:0,58,678	0/0:17,0:17:44.85:0,45,482	0/0:34,0:34:76.46:0,76,717	0/0:17,0:16:26.16:0,26,272	0/0:5,0:4:2.30:0,2,37	0/0:3,0:3:1.25:0,1,3	0/1:12,0:12:6.54:41,0,7	1/1:8,0:7:0.94:1,1,0	1/1:25,7:29:47.95:924,48,0	0/0:20,0:18:50.65:0,51,449	0/0:26,0:25:31.94:0,32,346	0/1:15,0:14:53.35:53,0,256
chr10	75148593	.	CTTT	C	2336.36	PASS	AB=0.775;AC=12;AF=0.214;AN=56;BaseQRankSum=0.799;DP=560;FS=26.951;HRun=13;HaplotypeScore=125.4650;InbreedingCoeff=0.1130;MQ=44.08;MQ0=25;MQRankSum=-3.649;QD=11.02;ReadPosRankSum=-0.278;VQSLOD=-0.3035;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:32:44.90:0,45,303	0/0:12,0:13:26.89:0,27,369	0/0:33,0:5:9.10:0,9,111	0/0:60,0:11:8.26:0,8,104	0/0:20,0:19:41.98:0,42,573	0/0:16,0:17:45.06:0,45,626	0/0:10,0:8:17.73:0,18,267	0/0:35,0:33:54.75:0,55,668	0/0:13,0:12:4.81:0,5,15	0/1:22,7:27:30.30:329,0,30	0/1:18,4:20:99:137,0,129	0/0:9,0:10:19.29:0,19,126	0/0:9,0:10:5.96:0,6,68	0/0:8,0:9:20.79:0,21,270	0/0:16,0:16:26.98:0,27,366	0/1:14,5:17:92.58:93,0,97	0/0:23,0:22:62.19:0,62,927	0/0:15,0:14:29.10:0,29,400	1/1:17,7:24:43.11:435,43,0	0/1:11,6:16:27.59:247,0,28	0/1:3,1:3:10.94:45,0,11	0/0:4,0:4:8.72:0,9,62	0/0:13,0:12:14.78:0,15,119	0/0:11,0:11:9.27:0,9,87	0/1:23,7:28:99:154,0,233	1/1:15,7:20:33.47:485,33,0	0/1:14,12:26:36.29:393,0,36	0/1:11,5:15:99:181,0,124
chr10	75148596	.	T	TTTTTTTTC	4949.86	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=3.743;DP=558;FS=0.426;HRun=0;HaplotypeScore=169.5638;InbreedingCoeff=0.9334;MQ=43.91;MQ0=31;MQRankSum=-5.527;QD=23.57;ReadPosRankSum=3.733;VQSLOD=3.9238;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:44.15:0,44,285	0/0:12,0:12:19.48:0,19,212	0/0:38,0:5:8.90:0,9,100	0/0:60,0:11:10.28:0,10,61	0/0:20,0:19:41.98:0,42,623	0/0:16,0:16:33.89:0,34,471	0/0:10,0:8:18.71:0,19,251	0/0:34,0:31:40.32:0,40,589	0/0:13,0:12:9.25:0,9,31	1/1:30,0:27:62.83:602,63,0	1/1:21,0:19:32.78:407,33,0	0/0:11,0:10:17.14:0,17,90	0/0:10,0:10:8.86:0,9,75	0/0:8,0:8:20.38:0,20,237	0/0:15,0:15:23.37:0,23,286	1/1:20,0:18:27.09:315,27,0	0/0:23,0:22:51.02:0,51,601	0/0:15,0:14:26.31:0,26,313	1/1:23,1:24:59.40:674,59,0	1/1:15,1:15:32.20:423,32,0	1/1:4,0:3:9:142,9,0	0/0:4,0:4:10.54:0,11,67	0/0:14,0:13:14.58:0,15,113	0/0:12,0:11:7.98:0,8,84	1/1:32,0:29:61.45:783,61,0	1/1:22,0:20:55.59:496,56,0	1/1:25,1:26:47.64:720,48,0	1/1:13,1:13:17.13:388,17,0
chr10	75148607	.	CT	C	1613.29	PASS	AB=0.833;AC=16;AF=0.286;AN=56;BaseQRankSum=6.359;DP=525;FS=2.881;HRun=13;HaplotypeScore=105.5235;InbreedingCoeff=0.2643;MQ=49.68;MQ0=23;MQRankSum=-3.032;QD=6.81;ReadPosRankSum=1.707;VQSLOD=2.8936;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:22.27:0,22,130	0/0:9,0:9:22.11:0,22,181	0/1:38,0:7:7.23:7,0,50	0/0:54,0:13:2.73:0,3,74	0/0:23,0:22:44.90:0,45,469	0/0:15,0:15:20.86:0,21,227	0/0:9,0:8:20.18:0,20,181	0/0:30,0:28:15.59:0,16,336	0/0:4,0:10:2.80:0,3,13	1/1:10,16:23:26.07:351,26,0	1/1:8,11:17:27.93:227,28,0	0/0:10,0:9:5.96:0,6,74	0/0:11,0:11:13.66:0,14,69	0/0:10,0:10:22.93:0,23,218	0/0:15,0:15:24:0,24,232	1/1:6,12:16:23.71:201,24,0	0/0:22,0:21:40.49:0,40,371	0/0:15,0:14:20.93:0,21,197	0/1:11,8:19:80.99:166,0,81	0/1:14,3:16:15.04:124,0,15	0/1:2,1:3:15.87:16,0,25	0/1:3,0:3:7.62:8,0,9	0/0:11,0:10:11.46:0,11,74	0/0:15,0:15:17.39:0,17,86	1/1:10,21:28:13.76:357,14,0	0/1:18,3:19:50.69:128,0,51	0/1:15,14:28:97.21:164,0,97	0/1:10,3:12:42.35:42,0,106
chr10	75148870	.	GT	G	1509.83	PASS	AB=0.886;AC=27;AF=0.482;AN=56;BaseQRankSum=11.244;DP=513;FS=1.905;HRun=11;HaplotypeScore=83.7250;InbreedingCoeff=0.7650;MQ=66.34;MQ0=2;MQRankSum=-4.512;QD=7.12;ReadPosRankSum=0.870;VQSLOD=2.3948;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:30:29.63:87,30,0	0/1:6,0:6:9.22:9,0,84	0/0:22,0:13:32.68:0,33,297	0/0:23,0:16:18.45:0,18,172	0/0:6,0:6:17.99:0,18,166	0/0:19,0:19:45.10:0,45,472	0/0:21,1:22:29.35:0,29,483	0/0:41,3:44:43.18:0,43,1041	1/1:10,0:14:1.47:19,1,0	0/0:21,0:20:42.05:0,42,428	0/1:9,1:10:5.43:5,0,141	1/1:5,0:17:26.24:73,26,0	1/1:6,0:10:5.23:18,5,0	0/0:20,0:20:51.10:0,51,528	0/0:21,0:21:48.10:0,48,499	0/0:12,0:13:26.26:0,26,313	0/0:44,1:46:95.28:0,95,1168	0/0:24,0:23:60.13:0,60,630	1/1:6,20:26:62.81:507,63,0	1/1:4,10:14:10.44:216,10,0	1/1:3,9:13:14.02:104,14,0	1/1:1,0:3:4.07:11,4,0	0/1:6,0:9:1.72:2,0,2	1/1:6,0:13:11.99:35,12,0	0/0:19,0:18:45.06:0,45,456	1/1:5,13:16:26.91:219,27,0	1/1:4,14:18:32.94:271,33,0	1/1:1,8:9:17.93:142,18,0
chr10	75148890	.	TC	T	2661.53	PASS	AB=0.972;AC=29;AF=0.518;AN=56;BaseQRankSum=10.559;DP=480;FS=0.000;HRun=1;HaplotypeScore=72.6699;InbreedingCoeff=0.4790;MQ=61.48;MQ0=8;MQRankSum=-7.974;QD=10.60;ReadPosRankSum=-1.074;VQSLOD=1.0552;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:72.02:897,72,0	0/0:5,0:5:15.04:0,15,196	0/0:36,1:15:38.73:0,39,431	0/1:44,1:18:15.54:16,0,229	0/0:11,0:11:27.06:0,27,347	0/0:22,0:22:41.66:0,42,800	0/0:20,0:20:51.13:0,51,673	0/0:31,0:31:90.26:0,90,1212	1/1:0,8:8:15.05:202,15,0	0/1:10,1:11:21.15:41,0,21	0/1:5,0:5:10.18:10,0,15	1/1:1,12:13:39.12:497,39,0	1/1:4,4:8:23.73:238,24,0	0/0:14,0:14:39.08:0,39,517	0/0:18,0:18:47.99:0,48,586	0/1:9,1:10:12.13:71,0,12	0/0:46,0:46:99:0,127,1769	0/0:25,0:25:69.21:0,69,952	0/1:19,0:19:4.96:40,0,5	1/1:13,0:11:6.54:43,7,0	1/1:12,0:12:12.08:107,12,0	1/1:0,2:2:6.02:81,6,0	1/1:0,8:8:14.87:141,15,0	1/1:2,13:15:16.09:271,16,0	0/1:14,0:13:11.35:11,0,75	0/1:18,0:17:10.06:81,0,10	1/1:15,0:15:4.92:50,5,0	1/1:6,1:7:9.83:67,10,0
chr10	75149143	.	TCCAGAGGAACCAGGGTTCAGTTCCCACTCTCCACAGGGCAG	T	242.45	PASS	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.018;DP=296;FS=4.001;HRun=0;HaplotypeScore=225.2160;InbreedingCoeff=0.5643;MQ=61.44;MQ0=14;MQRankSum=-2.202;QD=40.41;ReadPosRankSum=-0.018;VQSLOD=2.6180;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:4:12.04:0,12,1955	0/0:37,0:10:27.97:0,28,1351	0/0:35,0:13:33.11:0,33,2591	0/0:10,0:10:27.09:0,27,4488	0/0:6,0:6:12.04:0,12,1928	0/0:14,0:14:42.14:0,42,5888	0/0:25,0:24:66.16:0,66,6208	./.	0/0:12,0:12:30.10:0,30,5028	0/0:5,0:5:11.40:0,11,2040	1/1:2,4:6:3.01:318,3,0	./.	0/0:5,0:5:12.04:0,12,2184	0/0:3,0:3:3.01:0,3,565	0/0:6,0:6:18.06:0,18,3336	0/0:17,0:16:48.16:0,48,6781	0/0:15,0:15:42.14:0,42,7510	0/0:15,0:15:42.14:0,42,4137	0/0:11,0:11:33.11:0,33,5815	0/0:21,0:21:58.44:0,58,8244	./.	./.	./.	0/0:9,0:9:27.09:0,27,5054	0/0:11,0:10:30.10:0,30,4701	0/0:13,0:12:39.13:0,39,6452	./.
chr10	75150203	.	TTTG	T	4900.01	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=9.715;DP=608;FS=3.788;HRun=0;HaplotypeScore=108.3830;InbreedingCoeff=0.8310;MQ=50.64;MQ0=21;MQRankSum=-6.320;QD=17.25;ReadPosRankSum=-0.272;VQSLOD=4.3310;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:33:56.34:343,56,0	0/0:8,0:8:23.83:0,24,273	0/0:35,0:9:20.30:0,20,153	0/0:28,0:8:15.16:0,15,86	0/0:28,0:27:60.65:0,61,744	0/0:12,0:12:20:0,20,379	0/0:24,0:24:69.18:0,69,1043	0/0:33,0:32:56.94:0,57,711	1/1:22,0:22:51.14:381,51,0	0/0:28,0:27:12.58:0,13,173	0/1:22,0:22:6.84:7,0,116	1/1:11,0:11:15.78:93,16,0	1/1:16,0:16:25.38:184,25,0	0/0:12,0:12:28.81:0,29,267	0/0:18,0:16:35.93:0,36,449	0/1:16,0:16:13.90:14,0,75	0/0:50,0:49:99:0,118,1482	0/0:27,0:27:54.33:0,54,920	1/1:7,18:23:32.99:640,33,0	1/1:1,26:27:69.03:963,69,0	1/1:3,12:14:18.05:260,18,0	0/1:7,0:7:0:0,0,0	1/1:15,0:15:33.87:218,34,0	1/1:16,0:16:12.32:96,12,0	0/0:21,0:21:17.10:0,17,193	1/1:4,20:22:60.10:843,60,0	1/1:1,19:19:33.07:506,33,0	1/1:1,12:13:24.06:352,24,0
chr10	75150205	.	TG	T	3579.03	PASS	AC=24;AF=0.444;AN=54;BaseQRankSum=9.079;DP=593;FS=0.740;HRun=1;HaplotypeScore=94.4536;InbreedingCoeff=0.9628;MQ=50.30;MQ0=21;MQRankSum=-5.709;QD=15.49;ReadPosRankSum=-1.210;VQSLOD=3.1284;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:33:59.71:382,60,0	0/0:8,0:8:23.79:0,24,196	0/0:34,1:9:15.48:0,15,145	0/0:27,0:7:4.49:0,4,64	0/0:27,0:26:40.11:0,40,425	0/0:14,0:14:12.15:0,12,196	0/0:25,0:25:69.08:0,69,625	0/0:32,0:31:21.33:0,21,476	1/1:22,0:22:53.17:377,53,0	0/0:27,0:26:48.86:0,49,357	0/0:22,0:22:42.14:0,42,255	1/1:10,0:10:13.38:89,13,0	1/1:15,0:15:28.81:185,29,0	0/0:10,0:10:29.53:0,30,221	0/0:17,0:15:18.62:0,19,268	0/0:15,0:15:21.90:0,22,146	0/0:49,1:49:99:0,106,933	0/0:26,0:26:17.32:0,17,492	1/1:23,0:21:52.79:434,53,0	1/1:26,0:26:68.74:572,69,0	1/1:16,0:14:14.87:133,15,0	./.	1/1:14,0:14:39.50:259,40,0	1/1:16,0:16:17.78:112,18,0	0/0:20,1:21:33.87:0,34,297	1/1:22,0:20:59.93:521,60,0	1/1:20,0:19:32.99:300,33,0	1/1:13,0:13:23.99:214,24,0
chr10	75150206	.	GT	G	151.08	PASS	AB=0.976;AC=21;AF=0.389;AN=54;BaseQRankSum=11.042;DP=596;FS=7.729;HRun=15;HaplotypeScore=106.0850;InbreedingCoeff=0.6183;MQ=49.14;MQ0=22;MQRankSum=2.035;QD=0.60;ReadPosRankSum=7.303;VQSLOD=-0.6451;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:11.64:0,12,54	0/0:9,0:9:11.90:0,12,95	0/0:34,0:8:7.43:0,7,54	0/0:27,0:7:7.27:0,7,27	0/0:24,1:26:27.49:0,27,321	0/0:12,0:13:9.22:0,9,175	0/0:24,1:25:46.45:0,46,506	0/0:29,2:31:15.31:0,15,216	0/0:22,0:22:6.24:0,6,36	1/1:27,0:26:12.48:47,12,0	1/1:22,0:22:0.07:16,0,0	0/0:11,0:11:9.60:0,10,46	0/0:16,0:15:20.10:0,20,124	0/0:9,0:9:13.85:0,14,75	0/0:16,1:15:3.32:0,3,168	1/1:14,0:14:2.45:13,2,0	0/0:47,1:48:14.02:0,14,603	0/1:23,2:26:2.53:3,0,311	0/1:24,0:22:15.04:15,0,23	1/1:28,0:28:15.37:55,15,0	1/1:16,0:14:7.48:20,7,0	./.	0/0:14,0:14:8.61:0,9,32	0/1:16,0:16:1.82:2,0,18	1/1:22,0:22:15:37,15,0	1/1:23,0:21:13.46:47,13,0	1/1:20,0:19:17.18:48,17,0	1/1:13,0:13:10.89:30,11,0
chr10	75150219	.	TTTC	T	2377.91	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=9.287;DP=600;FS=39.461;HRun=0;HaplotypeScore=111.1227;InbreedingCoeff=0.1786;MQ=45.65;MQ0=38;MQRankSum=-4.626;QD=7.45;ReadPosRankSum=-3.441;VQSLOD=0.2650;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:99:181,0,118	0/0:8,0:8:20.86:0,21,218	0/0:37,0:4:2.48:0,2,61	0/0:32,0:4:8.95:0,9,74	0/0:26,0:25:37.86:0,38,721	0/0:15,0:15:23.99:0,24,427	0/0:26,0:26:63.96:0,64,984	0/0:28,0:27:46.37:0,46,551	0/1:21,0:21:26.21:183,0,26	1/1:3,24:26:64.07:779,64,0	1/1:2,18:20:41.40:354,41,0	0/1:14,0:13:51.77:52,0,128	0/1:15,0:14:42.55:43,0,219	0/0:10,0:10:23.86:0,24,166	0/0:17,0:15:3.60:0,4,267	1/1:3,10:13:18.06:248,18,0	0/0:45,0:43:99:0,111,1345	0/0:29,0:29:52.83:0,53,661	0/1:24,0:22:33.67:34,0,176	0/1:30,0:30:35.73:118,0,36	1/1:13,0:11:4.21:29,4,0	0/0:8,0:7:5.99:0,6,48	0/1:15,0:15:58.79:59,0,155	0/1:16,0:16:45.26:45,0,87	1/1:9,10:18:45.12:404,45,0	0/1:25,0:23:4.10:4,0,107	0/1:23,0:22:3.36:3,0,111	1/1:11,0:11:4.59:22,5,0
chr10	75151256	.	T	TA	18999.81	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-13.647;DP=678;FS=11.875;HRun=2;HaplotypeScore=64.0592;InbreedingCoeff=0.9999;MQ=86.72;MQ0=0;MQRankSum=-2.496;QD=42.60;ReadPosRankSum=4.096;VQSLOD=3.7371;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,50:50:99:2156,135,0	0/0:10,0:10:30.10:0,30,419	0/0:26,0:26:66.16:0,66,865	0/0:20,0:20:54.17:0,54,720	0/0:28,0:28:81.27:0,81,1128	0/0:27,0:27:78.26:0,78,1091	0/0:28,0:28:84.26:0,84,1155	0/0:23,0:23:60.19:0,60,810	1/1:1,27:28:60.20:958,60,0	1/1:0,21:21:60.20:959,60,0	1/1:0,18:18:48.16:764,48,0	1/1:0,23:23:60.20:959,60,0	1/1:0,21:21:57.19:902,57,0	0/0:18,0:18:54.16:0,54,724	0/0:32,0:32:93.31:0,93,1296	1/1:0,22:22:60.20:957,60,0	0/0:20,0:20:60.20:0,60,838	1/1:0,17:17:48.16:767,48,0	1/1:0,18:18:54.17:823,54,0	1/1:0,28:28:78.14:1186,78,0	1/1:0,40:40:99:1724,108,0	1/1:0,31:31:84.29:1341,84,0	1/1:0,21:21:54.18:863,54,0	1/1:0,16:16:45.15:719,45,0	1/1:0,28:28:81.28:1294,81,0	1/1:0,23:23:66.15:997,66,0	1/1:0,23:23:51.17:815,51,0	1/1:1,17:18:51.17:815,51,0
chr10	75151989	.	G	GC	10234.18	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-4.967;DP=577;FS=4.849;HRun=1;HaplotypeScore=82.6862;InbreedingCoeff=0.9992;MQ=68.33;MQ0=0;MQRankSum=-4.376;QD=38.62;ReadPosRankSum=2.242;VQSLOD=5.5635;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:42:99:1607,108,0	0/0:10,0:10:27.09:0,27,350	0/0:28,0:27:75.23:0,75,943	0/0:23,0:20:54.59:0,55,644	0/0:18,0:18:48.16:0,48,622	0/0:15,0:15:39.13:0,39,505	0/0:17,0:17:51.10:0,51,640	0/0:39,0:39:99:0,114,1416	1/1:0,18:18:48.16:711,48,0	0/0:27,0:27:75.24:0,75,957	0/0:21,0:21:39.55:0,40,506	1/1:3,14:17:45.11:641,45,0	1/1:1,10:11:33.08:470,33,0	0/0:27,0:27:78.17:0,78,987	0/0:19,0:19:45.15:0,45,582	0/0:19,0:19:45.15:0,45,583	0/0:20,0:20:54.18:0,54,700	0/0:14,0:14:42.11:0,42,525	1/1:2,11:13:39.13:568,39,0	1/1:2,17:19:51.13:737,51,0	1/1:1,23:24:63.21:943,63,0	1/1:1,12:13:33.07:469,33,0	1/1:2,19:20:48.15:698,48,0	1/1:0,23:24:60.20:892,60,0	0/0:15,0:15:45.15:0,45,584	1/1:2,19:21:21.24:795,21,0	1/1:3,18:21:51.17:761,51,0	1/1:0,21:21:63.21:943,63,0
chr10	75153556	.	AACAC	A	557.71	PASS	AB=0.953;AC=14;AF=0.280;AN=50;BaseQRankSum=3.818;DP=532;FS=0.000;HRun=0;HaplotypeScore=100.3225;InbreedingCoeff=0.4291;MQ=60.37;MQ0=13;MQRankSum=1.042;QD=2.90;ReadPosRankSum=1.609;VQSLOD=1.2857;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:38:19.80:20,0,132	0/0:8,0:8:11.99:0,12,169	./.	./.	0/1:20,0:20:23.35:23,0,338	0/1:22,1:23:8.37:8,0,351	0/0:23,0:24:23.82:0,24,434	0/0:27,0:26:6.49:0,6,93	1/1:3,8:13:20.97:258,21,0	0/0:17,0:15:24.54:0,25,470	0/0:9,0:9:5.83:0,6,120	1/1:11,0:11:3:25,3,0	./.	0/0:7,0:8:11.78:0,12,157	0/0:15,0:15:30.09:0,30,541	0/0:9,0:12:23.55:0,24,358	0/1:18,0:19:27.54:28,0,225	0/0:28,0:29:44.59:0,45,677	0/0:14,0:14:9.03:0,9,170	0/0:10,0:19:16.59:0,17,201	0/0:31,0:27:18.06:0,18,315	1/1:17,0:17:1.89:18,2,0	1/1:9,5:14:5.72:92,6,0	1/1:22,13:36:17.89:243,18,0	0/0:9,0:9:17.80:0,18,324	0/0:24,0:23:45.53:0,46,668	0/0:12,0:12:15.05:0,15,224	0/0:12,0:11:7.27:0,7,92
chr10	75154120	.	ACAGCCCCTT	A	9397.75	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.063;DP=639;FS=0.397;HRun=0;HaplotypeScore=222.5840;InbreedingCoeff=0.9891;MQ=84.79;MQ0=0;MQRankSum=-15.648;QD=62.24;ReadPosRankSum=3.208;VQSLOD=4.7271;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:39:1075,39,0	0/0:12,0:12:36.11:0,36,1503	0/0:21,0:21:57.16:0,57,2191	0/0:23,0:24:63.54:0,64,2265	0/0:23,0:23:69.22:0,69,3076	0/0:32,0:32:93.28:0,93,4208	0/0:26,0:26:78.21:0,78,3215	0/0:26,0:26:78.23:0,78,2943	1/1:0,22:22:54.19:1696,54,0	0/0:23,0:23:69.22:0,69,3241	0/0:26,0:26:78.24:0,78,3502	1/1:0,25:25:66.23:2077,66,0	1/1:0,22:22:48.16:1512,48,0	0/0:13,0:13:39.11:0,39,1709	0/0:33,0:33:99:0,99,4641	0/0:24,0:24:72.21:0,72,3146	0/0:23,0:23:63.22:0,63,2812	0/0:16,0:16:48.15:0,48,2157	0/0:30,0:30:87.25:0,87,3558	0/0:27,0:27:81.26:0,81,3740	0/0:20,0:20:60.21:0,60,2868	1/1:0,24:24:57.20:1794,57,0	1/1:0,14:14:33.05:961,33,0	1/1:0,16:16:9:283,9,0	0/0:28,0:28:84.26:0,84,3852	0/0:30,0:30:87.27:0,87,3820	0/0:20,0:20:60.21:0,60,2967	0/0:11,0:11:30.10:0,30,1290
chr10	75155390	.	CA	C	8409.36	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=11.401;DP=498;FS=2.896;HRun=1;HaplotypeScore=54.4884;InbreedingCoeff=0.9966;MQ=78.55;MQ0=0;MQRankSum=-1.739;QD=37.88;ReadPosRankSum=2.526;VQSLOD=5.3457;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:72.24:1002,72,0	0/0:8,0:8:18.06:0,18,288	0/0:8,0:8:24.08:0,24,375	0/0:17,0:17:45.10:0,45,658	0/0:25,0:25:75.24:0,75,1174	0/0:23,0:23:69.24:0,69,1102	0/0:20,0:20:60.16:0,60,881	0/0:29,0:29:87.27:0,87,1322	1/1:0,8:8:21.07:292,21,0	0/0:15,0:15:42.14:0,42,672	0/0:21,0:21:60.20:0,60,959	1/1:1,9:10:30.09:402,30,0	1/1:0,11:11:30.10:417,30,0	0/0:12,0:12:36.12:0,36,575	0/0:15,0:15:45.14:0,45,689	0/0:10,0:10:27.09:0,27,432	0/0:23,0:23:69.24:0,69,1103	0/0:34,0:34:93.27:0,93,1436	1/1:0,21:21:60.20:832,60,0	1/1:0,16:16:48.16:670,48,0	1/1:0,19:19:48.16:669,48,0	1/1:0,16:16:48.16:670,48,0	1/1:0,15:15:45.15:628,45,0	1/1:1,23:24:72.23:988,72,0	0/0:16,0:16:42.13:0,42,640	1/1:0,23:22:66.22:919,66,0	1/1:0,19:18:48.16:669,48,0	1/1:1,7:8:18.06:251,18,0
chr10	75155509	.	T	TTTTTTTG	4318.90	PASS	AB=0.787;AC=24;AF=0.429;AN=56;BaseQRankSum=-0.680;DP=519;FS=2.916;HRun=0;HaplotypeScore=122.6350;InbreedingCoeff=0.6816;MQ=63.02;MQ0=1;MQRankSum=-9.014;QD=17.92;ReadPosRankSum=-3.365;VQSLOD=3.7674;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,12:39:9.77:1149,10,0	0/0:3,0:3:6.02:0,6,133	0/0:20,0:15:3.01:0,3,67	0/0:14,0:12:14.99:0,15,154	0/0:18,0:18:30.08:0,30,525	0/0:24,0:24:48.14:0,48,938	0/0:17,0:17:27.09:0,27,599	0/0:32,0:32:35.48:0,35,624	1/1:3,2:6:6.02:215,6,0	0/0:16,0:16:33.05:0,33,508	0/0:19,0:19:30:0,30,437	1/1:8,4:14:6.01:216,6,0	1/1:9,5:14:12.04:431,12,0	0/0:16,0:16:33.03:0,33,559	0/0:18,0:18:33.10:0,33,641	0/0:13,0:13:27.07:0,27,421	0/0:29,0:29:48.16:0,48,1035	0/0:30,0:30:51.14:0,51,1037	1/1:29,0:27:21.44:342,21,0	1/1:11,0:18:6:180,6,0	1/1:16,0:15:3:90,3,0	1/1:8,3:13:9.02:315,9,0	0/1:11,2:16:6.42:272,0,6	1/1:11,5:18:12.04:431,12,0	0/0:9,0:9:21.07:0,21,427	0/1:20,0:26:68.90:495,0,69	1/1:12,0:22:3.41:92,3,0	1/1:4,0:6:3.01:91,3,0
chr10	75156063	.	T	TTGCG	6227.56	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-4.195;DP=541;FS=4.983;HRun=0;HaplotypeScore=86.6208;InbreedingCoeff=0.9732;MQ=64.71;MQ0=1;MQRankSum=-3.387;QD=27.31;ReadPosRankSum=-1.749;VQSLOD=3.8224;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:42.08:0,42,588	0/0:10,0:10:24.08:0,24,393	0/0:23,0:18:26.02:0,26,337	0/0:17,0:16:10.98:0,11,200	0/0:25,0:25:60.13:0,60,844	0/0:16,0:16:30.07:0,30,442	0/0:22,0:22:54.11:0,54,783	0/0:23,0:23:32.19:0,32,392	0/0:12,0:12:27.08:0,27,418	1/1:7,0:16:18.72:327,19,0	1/1:6,0:11:6.02:91,6,0	0/0:22,0:22:45.11:0,45,664	0/0:15,0:15:24.07:0,24,369	0/0:19,0:19:51.16:0,51,810	0/0:22,0:22:54.15:0,54,813	1/1:2,0:12:21.07:366,21,0	0/0:26,0:26:60.15:0,60,907	1/1:11,5:21:17.09:310,17,0	1/1:13,15:28:41.96:787,42,0	1/1:6,7:15:23.87:470,24,0	1/1:11,30:41:60.21:1462,60,0	0/0:13,0:13:24.07:0,24,369	0/0:14,0:14:30.08:0,30,443	0/0:14,0:14:21.05:0,21,315	1/1:8,0:23:24.08:420,24,0	1/1:10,16:26:44.70:833,45,0	1/1:8,13:23:23.56:576,24,0	1/1:2,10:12:24.08:585,24,0
chr10	75157668	.	A	AT	9206.74	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-5.327;DP=396;FS=4.169;HRun=0;HaplotypeScore=40.5100;InbreedingCoeff=0.9662;MQ=69.07;MQ0=0;MQRankSum=0.715;QD=36.97;ReadPosRankSum=2.870;VQSLOD=4.3651;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:69.23:1007,69,0	0/0:8,0:8:24.08:0,24,335	0/0:13,0:12:21.32:0,21,285	0/0:5,0:4:8.76:0,9,96	0/0:20,0:20:57.14:0,57,719	0/0:15,0:15:45.15:0,45,629	0/0:7,0:7:18.06:0,18,250	0/0:28,0:28:78.23:0,78,1036	1/1:0,9:9:18.06:263,18,0	1/1:0,17:17:48.08:604,48,0	1/1:0,13:13:33.02:456,33,0	1/1:0,10:9:15.05:219,15,0	1/1:0,13:13:36.12:523,36,0	0/0:9,0:9:27.09:0,27,377	0/0:13,0:13:36.11:0,36,486	1/1:0,12:12:30.10:438,30,0	0/0:29,0:29:87.26:0,87,1165	1/1:0,20:21:54.17:769,54,0	1/1:2,17:19:51.15:705,51,0	1/1:0,22:22:59.68:765,60,0	1/1:0,8:8:18.06:261,18,0	1/1:0,3:3:9.03:132,9,0	1/1:0,4:4:9.03:130,9,0	1/1:0,12:12:30.10:436,30,0	1/1:0,12:12:36.12:524,36,0	1/1:0,16:16:48.15:681,48,0	1/1:1,24:25:66.22:945,66,0	1/1:0,8:8:24.08:350,24,0
chr10	75160052	.	A	AAAAAG	962.68	PASS	AB=0.967;AC=17;AF=0.304;AN=56;BaseQRankSum=3.955;DP=355;FS=10.989;HRun=0;HaplotypeScore=101.7555;InbreedingCoeff=0.0631;MQ=51.14;MQ0=23;MQRankSum=-1.083;QD=6.69;ReadPosRankSum=1.200;VQSLOD=0.7973;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:12:2.46:11,0,2	0/0:1,0:1:1.25:0,1,3	0/0:62,0:14:17.30:0,17,321	0/0:49,0:10:13.09:0,13,201	0/0:5,0:5:12.03:0,12,211	0/0:9,0:9:20.59:0,21,255	0/0:8,0:8:16.88:0,17,267	0/0:6,0:6:12.01:0,12,205	0/1:12,1:13:10.16:72,0,10	0/1:14,0:13:0.82:1,0,227	0/0:12,0:11:17.40:0,17,251	0/1:3,0:3:0.26:5,0,0	1/1:7,0:7:2.66:56,3,0	0/0:7,0:7:2.49:0,2,108	0/0:7,0:7:16.27:0,16,236	0/1:8,0:6:1.53:2,0,138	0/0:23,0:18:21.90:0,22,368	0/0:13,0:8:14.31:0,14,164	0/1:11,0:10:34.60:63,0,35	0/1:19,3:21:74.18:241,0,74	0/1:1,0:1:0:0,0,0	0/1:6,0:6:6.31:40,0,6	0/1:4,0:5:19.01:109,0,19	1/1:11,2:11:7.48:181,7,0	0/0:8,0:8:12.07:0,12,150	0/1:10,0:10:5.59:6,0,63	0/1:12,0:11:14.35:278,0,14	0/1:4,0:4:9.35:42,0,9
chr10	75160059	.	AAAC	A	1559.83	PASS	AB=0.950;AC=24;AF=0.429;AN=56;BaseQRankSum=-0.696;DP=376;FS=37.783;HRun=0;HaplotypeScore=85.2626;InbreedingCoeff=-0.1037;MQ=48.42;MQ0=20;MQRankSum=-3.412;QD=5.93;ReadPosRankSum=-2.394;VQSLOD=0.4420;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,3:12:36.09:143,0,36	0/0:1,0:1:0.47:0,0,1	0/1:62,0:12:13.37:13,0,87	0/0:49,0:10:7.19:0,7,113	0/0:8,0:8:21.03:0,21,273	0/0:10,0:10:10.63:0,11,193	0/0:7,0:7:17.48:0,17,162	0/0:10,0:10:9.69:0,10,246	0/1:13,0:13:66.32:66,0,80	0/1:15,0:14:86.94:87,0,110	0/0:14,0:13:3.64:0,4,133	0/1:3,0:3:8.76:26,0,9	0/1:5,2:7:28.67:79,0,29	0/0:6,0:6:11.94:0,12,136	0/0:7,0:7:5.56:0,6,115	0/1:10,0:8:10.61:11,0,47	0/1:18,0:16:1.04:1,0,267	0/1:13,0:8:24.19:31,0,24	1/1:15,0:13:9.90:196,10,0	0/1:22,1:22:99:273,0,135	1/1:3,0:3:2.99:24,3,0	0/1:4,2:6:37.60:76,0,38	1/1:7,2:9:22.76:239,23,0	1/1:12,1:11:4.77:42,5,0	0/1:10,0:10:7.27:80,0,7	0/1:13,0:13:22.60:194,0,23	0/1:12,0:11:81.39:81,0,107	1/1:5,0:5:8.23:62,8,0
chr10	75160060	.	AAC	A	2219.44	PASS	AB=0.936;AC=32;AF=0.571;AN=56;BaseQRankSum=0.054;DP=378;FS=32.062;HRun=0;HaplotypeScore=80.2577;InbreedingCoeff=-0.1267;MQ=48.68;MQ0=20;MQRankSum=-2.525;QD=6.59;ReadPosRankSum=-1.833;VQSLOD=0.7532;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:12:25.88:102,0,26	1/1:1,0:1:0.89:2,1,0	0/1:61,0:12:13.11:13,0,69	0/1:48,0:10:6.65:7,0,89	0/0:8,0:8:21.03:0,21,253	0/0:10,0:10:10.86:0,11,145	0/0:7,0:7:7.92:0,8,83	0/0:10,0:10:7.60:0,8,232	0/1:13,0:13:17.37:62,0,17	0/1:15,0:14:30.46:95,0,30	0/1:14,0:13:21.25:21,0,36	1/1:3,0:3:1.68:36,2,0	1/1:7,0:7:3.38:73,3,0	0/0:6,0:6:6.13:0,6,133	0/1:7,0:7:25.26:25,0,73	0/1:10,0:8:15.69:43,0,16	0/1:18,0:16:17.60:18,0,187	0/1:13,0:8:1.08:26,0,1	1/1:10,6:14:4.93:299,5,0	0/1:13,10:22:54.67:460,0,55	1/1:3,0:3:2.99:24,3,0	0/1:6,0:6:32.99:74,0,33	1/1:8,1:9:20.57:190,21,0	1/1:14,0:12:9.83:52,10,0	1/1:11,0:11:23.06:164,23,0	0/1:4,9:13:15.58:317,0,16	0/1:10,3:12:68.52:173,0,69	1/1:3,2:5:8.96:106,9,0
chr10	75160061	.	AC	A	2360.19	PASS	AB=0.961;AC=40;AF=0.714;AN=56;BaseQRankSum=3.047;DP=380;FS=10.705;HRun=1;HaplotypeScore=76.9152;InbreedingCoeff=-0.0073;MQ=48.77;MQ0=20;MQRankSum=-3.865;QD=6.63;ReadPosRankSum=1.225;VQSLOD=-0.3326;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,1:12:4.99:95,5,0	1/1:1,0:1:2.96:19,3,0	0/1:59,1:12:13.59:14,0,56	0/1:46,2:10:6.61:7,0,65	0/0:8,0:8:21.01:0,21,206	0/1:10,0:10:23.41:23,0,90	0/1:7,0:7:14.76:15,0,23	0/0:10,0:10:4.74:0,5,189	1/1:12,1:13:23.03:112,23,0	1/1:14,1:14:11.29:159,11,0	1/1:13,1:13:20.96:88,21,0	1/1:2,1:3:7.93:43,8,0	1/1:7,0:7:11.37:70,11,0	0/0:6,0:6:0.16:0,0,106	0/1:7,0:7:43.13:44,0,43	1/1:8,2:8:5.94:94,6,0	0/1:18,1:17:56.79:57,0,125	1/1:13,0:8:17.58:77,18,0	1/1:16,1:15:25.43:276,25,0	0/1:21,2:22:29.96:314,0,30	1/1:3,0:3:2.99:24,3,0	0/1:6,0:6:7.93:70,0,8	1/1:8,1:9:13.23:130,13,0	1/1:14,1:13:13.99:81,14,0	1/1:9,2:11:31.47:247,31,0	0/1:11,2:13:13.35:240,0,13	0/1:12,1:12:17.77:133,0,18	1/1:4,1:5:9.02:91,9,0
chr10	75160125	.	A	ACGC	4443.29	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-9.121;DP=397;FS=0.000;HRun=0;HaplotypeScore=73.3830;InbreedingCoeff=0.9517;MQ=86.19;MQ0=0;MQRankSum=-1.723;QD=46.28;ReadPosRankSum=3.877;VQSLOD=6.1286;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:24:48.10:991,48,0	0/0:2,0:2:3.01:0,3,47	0/0:19,0:19:36.10:0,36,491	0/0:18,0:18:39.09:0,39,537	0/0:15,0:15:45.13:0,45,677	0/0:11,0:11:33.08:0,33,455	0/0:16,0:16:48.15:0,48,723	0/0:25,0:25:57.12:0,57,761	1/1:2,8:10:21.07:454,21,0	0/0:9,0:9:24.08:0,24,357	0/0:11,0:11:27.09:0,27,421	1/1:0,14:16:42.14:908,42,0	1/1:2,10:12:18.06:386,18,0	0/0:7,0:7:21.07:0,21,328	0/0:16,0:16:39.13:0,39,610	0/0:16,0:15:39.12:0,39,587	0/0:27,0:27:72.22:0,72,1096	0/0:7,0:7:21.07:0,21,322	0/0:16,0:16:35.91:0,36,375	0/0:12,0:12:14.98:0,15,190	0/0:23,0:23:28.80:0,29,904	1/1:1,6:7:18.06:388,18,0	1/1:1,6:7:15.05:324,15,0	1/1:1,19:20:48.12:992,48,0	0/0:15,0:15:39.01:0,39,551	0/0:17,0:17:39.13:0,39,610	0/0:13,0:13:33.04:0,33,487	0/0:6,0:6:12.04:0,12,188
chr10	75160547	.	C	CT	2066.98	PASS	AB=0.712;AC=30;AF=0.536;AN=56;BaseQRankSum=1.769;DP=562;FS=2.914;HRun=15;HaplotypeScore=76.6867;InbreedingCoeff=0.4592;MQ=66.87;MQ0=0;MQRankSum=-1.649;QD=5.50;ReadPosRankSum=-0.330;VQSLOD=2.6034;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:19,26:47:6.88:238,0,7	0/0:4,0:4:5.72:0,6,34	0/0:14,0:10:0.86:0,1,20	0/0:10,0:9:4.51:0,5,21	0/0:22,0:21:28.47:0,28,164	0/0:14,1:15:1.16:0,1,116	0/0:16,0:19:5.02:0,5,81	0/0:32,3:37:27.73:0,28,254	0/1:12,2:14:12.67:84,0,13	1/1:13,6:19:9.93:78,10,0	1/1:15,6:22:12.95:195,13,0	1/1:9,9:18:5.82:145,6,0	1/1:7,11:18:13.23:104,13,0	0/0:20,0:21:27:0,27,157	0/0:13,0:13:24.96:0,25,147	1/1:7,15:23:14.84:220,15,0	0/0:28,0:31:36.04:0,36,206	0/1:3,10:12:1.88:83,0,2	1/1:17,0:17:12.19:105,12,0	0/1:20,2:22:0.35:108,0,0	1/1:20,1:21:16.64:77,17,0	0/1:12,15:27:8.08:143,0,8	1/1:8,13:21:1.14:103,1,0	0/1:9,11:19:42.85:99,0,43	1/1:5,5:10:8.95:69,9,0	1/1:23,0:23:26.43:110,26,0	1/1:17,1:19:22.29:137,22,0	1/1:20,1:21:28.57:154,29,0
chr10	75160561	.	T	TC	1890.13	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-4.618;DP=532;FS=2.195;HRun=0;HaplotypeScore=67.0597;InbreedingCoeff=0.9346;MQ=61.94;MQ0=1;MQRankSum=0.142;QD=16.88;ReadPosRankSum=1.856;VQSLOD=5.6319;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:33.40:0,33,270	0/0:4,0:4:12.01:0,12,131	0/0:15,0:5:11.91:0,12,102	0/0:10,0:5:7.19:0,7,46	0/0:20,0:19:51.05:0,51,562	0/0:16,0:16:39.29:0,39,453	0/0:15,0:15:29.56:0,30,293	0/0:29,0:29:80.03:0,80,886	0/0:14,0:14:30.11:0,30,234	0/0:20,0:19:39.86:0,40,335	0/0:20,0:20:15.34:0,15,174	0/0:17,0:16:9.68:0,10,89	0/0:17,0:17:14.08:0,14,111	0/0:22,0:22:40.49:0,40,602	0/0:13,0:13:39.05:0,39,452	0/0:23,0:23:35.51:0,36,234	0/0:26,0:26:53.99:0,54,608	0/0:15,0:12:9.65:0,10,91	1/1:1,13:16:47.16:447,47,0	1/1:8,14:22:14.92:327,15,0	1/1:5,14:20:17.94:202,18,0	0/0:32,0:32:54.98:0,55,406	0/0:22,0:22:26.76:0,27,226	0/0:20,0:19:28.22:0,28,257	0/0:11,0:11:13.85:0,14,133	1/1:2,16:19:45.40:475,45,0	1/1:3,16:20:29.38:290,29,0	1/1:3,12:15:29.24:334,29,0
chr10	75160868	.	GACACACACACACACACACACAC	G	2069.05	PASS	AC=14;AF=0.269;AN=52;BaseQRankSum=-0.594;DP=486;FS=25.685;HRun=0;HaplotypeScore=247.9306;InbreedingCoeff=0.8067;MQ=50.30;MQ0=26;MQRankSum=0.270;QD=18.47;ReadPosRankSum=-2.743;VQSLOD=0.9965;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:19:12.04:295,12,0	0/0:3,0:3:6.02:0,6,413	./.	./.	0/0:14,0:16:24.08:0,24,1693	0/0:21,0:21:27.09:0,27,1575	0/0:19,0:18:14.89:0,15,632	0/0:23,0:19:18.06:0,18,506	1/1:6,9:14:9.03:426,9,0	0/0:20,0:27:51.37:0,51,1962	0/0:9,0:20:12.04:0,12,497	1/1:11,2:13:3.01:174,3,0	1/1:10,7:17:6.02:328,6,0	0/0:12,0:12:27.08:0,27,1668	0/0:9,0:10:14.84:0,15,791	0/0:13,0:18:13.88:0,14,1389	0/0:20,0:24:57.20:0,57,3710	0/0:16,0:15:12.04:0,12,483	0/0:17,0:13:18.94:0,19,516	0/0:9,0:17:15.05:0,15,481	0/0:21,0:20:18.06:0,18,656	1/1:13,2:15:21.07:528,21,0	1/1:3,12:15:6.02:107,6,0	1/1:16,0:16:15.05:380,15,0	0/0:9,0:15:24.08:0,24,1251	0/0:11,0:12:12.20:0,12,466	0/0:14,0:16:18.04:0,18,493	0/0:16,0:15:0.57:0,1,160
chr10	75161004	.	TA	T	5899.90	PASS	AB=0.554;AC=35;AF=0.625;AN=56;BaseQRankSum=10.219;DP=555;FS=0.395;HRun=12;HaplotypeScore=60.0745;InbreedingCoeff=0.8885;MQ=69.90;MQ0=2;MQRankSum=0.717;QD=16.30;ReadPosRankSum=2.014;VQSLOD=5.9285;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,28:32:59.77:464,60,0	0/0:6,0:6:15.03:0,15,152	0/0:28,2:16:11.47:0,11,84	0/0:17,1:7:1.82:0,2,5	0/0:27,1:28:33.28:0,33,652	0/0:19,1:20:30.85:0,31,481	0/0:10,0:10:24.05:0,24,244	0/0:23,2:25:7.60:0,8,425	1/1:2,11:13:29.88:232,30,0	1/1:4,17:21:50.79:395,51,0	1/1:4,25:29:65.74:510,66,0	1/1:0,16:16:38.77:302,39,0	1/1:0,8:8:23.91:186,24,0	0/0:13,0:13:33.06:0,33,329	0/0:12,0:12:33.05:0,33,328	1/1:1,17:19:40.89:308,41,0	0/0:28,1:30:54.67:0,55,698	0/1:6,25:31:3.59:428,0,4	1/1:4,15:19:17.71:311,18,0	1/1:7,26:33:38.07:472,38,0	1/1:1,5:6:8.96:70,9,0	1/1:2,7:10:22.92:164,23,0	1/1:4,15:19:35.85:279,36,0	1/1:0,12:12:32.87:255,33,0	1/1:4,20:25:28.37:393,28,0	1/1:5,22:27:62.70:483,63,0	1/1:6,14:20:21.35:261,21,0	1/1:5,17:22:50.72:389,51,0
chr10	75161650	.	ATAAAT	A	4582.81	PASS	AB=0.972;AC=39;AF=0.696;AN=56;BaseQRankSum=-1.307;DP=363;FS=30.083;HRun=0;HaplotypeScore=64.4962;InbreedingCoeff=0.6783;MQ=61.98;MQ0=10;MQRankSum=0.449;QD=19.75;ReadPosRankSum=-6.893;VQSLOD=0.9974;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:10:28.87:444,29,0	0/0:7,0:7:18.06:0,18,271	0/1:41,2:12:27.66:28,0,151	0/1:23,0:7:4.51:5,0,31	0/0:35,0:35:14.09:0,14,1134	0/0:20,0:21:47.43:0,47,1226	0/0:6,0:6:17.98:0,18,349	0/0:31,0:31:14.82:0,15,954	1/1:7,0:7:21.06:334,21,0	1/1:7,0:7:21.05:310,21,0	1/1:3,0:3:9.03:150,9,0	1/1:6,0:6:18.05:279,18,0	1/1:7,0:7:21.06:337,21,0	0/0:8,0:8:23.99:0,24,414	0/1:5,0:5:11.02:11,0,167	1/1:13,0:13:6.02:95,6,0	0/0:22,0:23:47.63:0,48,1068	1/1:16,0:15:3.01:48,3,0	1/1:0,14:14:38.64:462,39,0	1/1:7,0:7:15.03:185,15,0	1/1:7,0:6:16.26:208,16,0	1/1:6,0:6:18.03:281,18,0	1/1:0,14:14:1.45:4,1,0	1/1:5,0:5:12.51:210,13,0	1/1:8,0:8:24.04:340,24,0	1/1:0,7:7:12.98:198,13,0	1/1:12,0:12:36.09:531,36,0	1/1:8,1:8:11.95:123,12,0
chr10	75162089	.	C	CA	22234	PASS	AB=0.824;AC=55;AF=0.982;AN=56;BaseQRankSum=5.309;DP=722;FS=2.282;HRun=2;HaplotypeScore=282.1948;InbreedingCoeff=-0.0102;MQ=51.19;MQ0=0;MQRankSum=3.756;QD=30.80;ReadPosRankSum=5.853;VQSLOD=3.6748;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,50:53:99:1743,132,0	1/1:5,10:15:29.69:429,30,0	1/1:5,8:11:18.17:212,18,0	0/1:11,3:14:0.56:254,0,1	1/1:10,24:34:56.70:835,57,0	1/1:2,16:18:45.15:593,45,0	1/1:3,17:20:50.08:669,50,0	1/1:9,25:34:74.27:984,74,0	1/1:0,22:22:57.19:763,57,0	1/1:11,27:38:80.74:1059,81,0	1/1:2,23:25:67.49:908,67,0	1/1:3,20:23:55.95:723,56,0	1/1:6,17:23:46.64:674,47,0	1/1:4,19:23:51.17:688,51,0	1/1:5,32:37:84.27:1115,84,0	1/1:5,25:30:71.13:1003,71,0	1/1:6,18:24:53.98:722,54,0	1/1:1,12:13:36.10:467,36,0	1/1:13,21:33:72.27:945,72,0	1/1:0,32:32:90.19:1139,90,0	1/1:7,16:23:43:544,43,0	1/1:3,18:21:58.44:773,58,0	1/1:6,28:34:82.65:1088,83,0	1/1:4,23:27:59.67:822,60,0	1/1:4,14:18:36.96:520,37,0	1/1:5,25:30:78.25:1030,78,0	1/1:7,30:38:97.15:1293,97,0	1/1:0,6:6:18.06:239,18,0
chr10	75162896	.	C	CTT	3549.31	PASS	AB=0.721;AC=34;AF=0.607;AN=56;BaseQRankSum=6.730;DP=601;FS=0.000;HRun=12;HaplotypeScore=101.3285;InbreedingCoeff=0.6642;MQ=73.35;MQ0=0;MQRankSum=0.500;QD=8.39;ReadPosRankSum=0.711;VQSLOD=1.6708;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:47:63.07:136,0,63	0/0:8,0:8:18.01:0,18,167	0/1:15,0:12:3.03:3,0,72	0/0:13,0:13:11.45:0,11,104	0/0:18,0:18:23.75:0,24,217	0/0:15,0:15:9.42:0,9,251	0/0:19,0:22:47.16:0,47,396	0/0:31,0:32:59.71:0,60,540	1/1:4,1:27:38.36:194,38,0	1/1:6,10:18:30.10:417,30,0	1/1:4,11:18:32.99:386,33,0	1/1:6,0:23:24.95:86,25,0	1/1:6,0:24:7.76:85,8,0	0/0:12,0:12:23.94:0,24,222	0/0:28,0:31:77.43:0,77,737	1/1:5,13:20:35.60:455,36,0	0/0:27,0:27:65.49:0,65,580	1/1:3,14:18:28.34:380,28,0	1/1:11,1:20:0.40:130,0,0	1/1:5,0:39:70.61:308,71,0	1/1:3,0:13:12.48:43,12,0	1/1:3,1:18:28.88:144,29,0	0/1:10,0:26:51.43:63,0,51	1/1:2,0:13:22.56:80,23,0	1/1:2,8:14:21.76:241,22,0	1/1:9,0:29:16.11:151,16,0	1/1:9,2:34:41.78:211,42,0	0/1:4,0:7:13.95:37,0,14
chr10	75163177	.	TGG	T	1221.21	PASS	AB=0.724;AC=14;AF=0.269;AN=52;BaseQRankSum=-5.314;DP=316;FS=0.000;HRun=11;HaplotypeScore=52.6410;InbreedingCoeff=0.5208;MQ=77.86;MQ0=0;MQRankSum=0.591;QD=9.54;ReadPosRankSum=3.704;VQSLOD=0.3019;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:35.88:0,36,284	0/0:2,0:2:3.01:0,3,42	0/1:19,0:19:0.81:1,0,271	0/0:17,0:14:24.71:0,25,303	./.	0/0:5,0:5:8.61:0,9,87	0/0:19,0:21:52.84:0,53,581	0/0:6,0:6:6.02:0,6,92	0/0:13,0:14:29.90:0,30,238	1/1:0,5:5:15.04:159,15,0	1/1:3,7:10:9.01:96,9,0	0/0:15,0:16:35.90:0,36,287	0/0:6,0:6:17.94:0,18,140	0/0:7,0:7:12.02:0,12,148	0/0:3,0:3:6.02:0,6,92	1/1:2,14:16:15.79:360,16,0	0/0:21,0:22:53.12:0,53,684	1/1:2,19:21:48.10:511,48,0	0/1:8,2:13:62.12:62,0,87	./.	0/1:14,2:27:20.29:20,0,128	0/0:4,0:4:8.98:0,9,72	0/0:12,0:12:20.92:0,21,162	0/0:17,0:19:24.90:0,25,214	1/1:2,8:10:15.03:160,15,0	0/0:4,0:6:10.66:0,11,47	0/1:0,1:6:15.23:21,0,15	0/0:1,0:5:5.49:0,5,34
chr10	75163181	.	G	GT	2206.38	PASS	AB=0.913;AC=16;AF=0.286;AN=56;BaseQRankSum=-7.989;DP=327;FS=0.542;HRun=0;HaplotypeScore=51.5402;InbreedingCoeff=0.7010;MQ=80.83;MQ0=0;MQRankSum=1.183;QD=19.70;ReadPosRankSum=4.642;VQSLOD=5.4478;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:36.10:480,36,0	0/0:1,0:1:3.01:0,3,38	0/0:21,0:20:19.49:0,19,380	0/0:19,0:16:34.69:0,35,337	0/0:1,0:1:2.98:0,3,22	0/0:5,0:5:14.87:0,15,146	0/0:22,0:22:58.15:0,58,587	0/0:6,0:6:9.02:0,9,111	1/1:1,12:13:30.10:396,30,0	0/0:6,0:6:14.70:0,15,92	0/0:10,0:10:14.87:0,15,110	1/1:2,15:17:39.12:502,39,0	1/1:0,6:6:18.06:244,18,0	0/1:7,1:8:13.56:14,0,166	0/0:3,0:3:6.02:0,6,84	0/1:14,1:15:2.37:2,0,191	0/0:22,0:22:56.70:0,57,683	0/0:20,0:20:50.29:0,50,333	0/0:14,0:14:35.74:0,36,278	0/0:1,0:1:3:0,3,26	0/0:30,0:30:71.57:0,72,542	1/1:1,3:4:3.08:75,3,0	1/1:0,11:11:21.07:286,21,0	1/1:3,15:18:30.08:393,30,0	0/0:9,0:9:17.78:0,18,122	0/0:8,0:8:11.94:0,12,98	0/0:10,0:10:17.87:0,18,131	0/0:7,0:7:11.95:0,12,93
chr10	75164200	.	GTTTT	G	4627.18	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-1.373;DP=526;FS=4.316;HRun=13;HaplotypeScore=108.5229;InbreedingCoeff=0.9955;MQ=70.57;MQ0=2;MQRankSum=-1.118;QD=33.78;ReadPosRankSum=1.609;VQSLOD=4.1610;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:25:53.99:0,54,619	0/0:5,0:7:18.06:0,18,339	0/0:22,0:16:28.22:0,28,432	0/0:15,0:16:22.10:0,22,229	0/0:18,0:21:60.20:0,60,1348	0/0:15,0:18:45.15:0,45,973	0/0:10,0:12:33.11:0,33,744	0/0:22,0:23:51.17:0,51,1058	0/0:2,0:12:30.09:0,30,397	0/0:2,0:26:67.21:0,67,419	0/0:4,0:19:33.21:0,33,232	0/0:2,0:10:27.07:0,27,338	0/0:1,0:10:30.09:0,30,374	0/0:10,0:10:27.08:0,27,580	0/0:18,0:18:54.19:0,54,1279	0/0:1,0:17:49.79:0,50,300	0/0:26,0:30:76.20:0,76,1776	0/0:3,0:19:46.86:0,47,280	1/1:8,15:23:45.04:622,45,0	1/1:1,31:32:84.21:1229,84,0	1/1:1,7:8:21.06:307,21,0	0/0:5,0:15:36.03:0,36,457	0/0:2,0:15:30.01:0,30,362	0/0:4,0:17:42.96:0,43,505	0/0:0,0:21:52.48:0,52,322	1/1:9,19:29:25.12:754,25,0	1/1:4,19:23:63.17:882,63,0	1/1:0,22:22:57.19:834,57,0
chr10	75166006	.	T	TACACAC	2410.06	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=7.097;DP=602;FS=18.051;HRun=0;HaplotypeScore=185.0920;InbreedingCoeff=0.2829;MQ=54.67;MQ0=12;MQRankSum=-5.882;QD=7.85;ReadPosRankSum=-0.633;VQSLOD=1.2138;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,1:33:26.52:452,27,0	0/0:6,0:6:15.04:0,15,332	0/0:21,0:10:30.10:0,30,545	0/0:28,0:19:51.15:0,51,1006	0/0:22,0:22:51.08:0,51,743	0/0:22,0:22:25.37:0,25,1051	0/0:14,0:14:39:0,39,605	0/0:30,0:28:72.19:0,72,1130	1/1:18,1:19:27.54:527,28,0	0/1:25,0:25:99:198,0,457	0/0:15,0:15:26.66:0,27,424	0/1:21,0:19:32.70:86,0,33	1/1:10,0:10:20.33:316,20,0	0/0:22,0:22:66.20:0,66,1327	0/0:28,0:27:75.02:0,75,1406	0/1:33,0:32:99:262,0,491	0/0:27,0:25:63.17:0,63,1145	0/1:15,0:15:99:130,0,304	0/1:13,0:13:39.79:40,0,121	0/1:20,0:19:8.47:8,0,156	0/0:44,0:42:11.02:0,11,431	1/1:24,1:25:23.09:305,23,0	1/1:16,1:17:11.77:85,12,0	1/1:20,1:22:4.16:26,4,0	0/1:21,0:21:52.83:53,0,309	0/1:18,0:18:16.51:17,0,335	0/0:16,0:16:16.38:0,16,234	0/1:11,0:11:96.07:96,0,105
chr10	75166008	.	CAT	C	2021.69	PASS	AB=0.947;AC=19;AF=0.339;AN=56;BaseQRankSum=1.193;DP=628;FS=7.004;HRun=0;HaplotypeScore=143.1328;InbreedingCoeff=0.4136;MQ=52.51;MQ0=16;MQRankSum=-1.894;QD=7.12;ReadPosRankSum=-0.051;VQSLOD=2.6678;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:33:26.44:202,26,0	0/0:6,0:6:15.92:0,16,240	0/0:21,0:10:30:0,30,295	0/0:26,0:17:50.97:0,51,515	0/0:23,0:23:53.93:0,54,604	0/0:27,0:26:51.61:0,52,787	0/0:15,0:15:29.48:0,29,411	0/0:31,0:27:60.27:0,60,796	1/1:22,0:21:9.65:133,10,0	0/0:24,0:24:59.71:0,60,601	0/0:17,0:17:9.94:0,10,245	1/1:21,0:19:16.07:184,16,0	1/1:10,0:10:10.52:109,11,0	0/0:22,0:22:31.24:0,31,730	0/0:29,0:28:73.63:0,74,989	0/0:33,0:32:67.58:0,68,550	0/0:30,0:28:36.93:0,37,704	0/0:16,0:16:11.54:0,12,213	0/1:14,0:14:25.52:211,0,26	0/1:20,3:22:20.89:244,0,21	0/1:44,2:44:99:247,0,146	1/1:24,0:24:16.64:105,17,0	0/1:18,0:17:14.09:119,0,14	1/1:24,0:22:9.81:77,10,0	0/0:24,0:24:39.72:0,40,316	0/1:19,1:20:99:142,0,103	0/1:12,3:15:22.51:277,0,23	0/1:12,0:12:10.04:164,0,10
chr10	75166010	.	T	TACACAC	3711.61	PASS	AB=1.000;AC=26;AF=0.500;AN=52;BaseQRankSum=5.181;DP=669;FS=3.161;HRun=0;HaplotypeScore=219.3929;InbreedingCoeff=0.6013;MQ=51.03;MQ0=21;MQRankSum=-6.141;QD=10.92;ReadPosRankSum=-2.021;VQSLOD=2.6316;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:35:20.99:404,21,0	0/0:6,0:6:12.03:0,12,245	./.	./.	0/0:24,0:23:18.04:0,18,331	0/0:30,0:29:29.06:0,29,551	0/0:17,0:17:14.62:0,15,284	0/0:32,0:27:12.02:0,12,208	1/1:23,0:22:22.49:543,22,0	1/1:26,0:25:32.96:603,33,0	1/1:16,1:17:5.20:61,5,0	0/1:20,0:18:33.53:79,0,34	1/1:12,0:12:20.72:343,21,0	0/0:24,0:26:46.92:0,47,832	0/0:30,0:30:38.92:0,39,747	1/1:29,1:32:35.41:769,35,0	0/0:32,0:31:22.19:0,22,548	1/1:16,1:17:17.21:285,17,0	0/1:13,0:13:11.31:11,0,127	0/0:24,0:23:11.89:0,12,179	0/0:48,0:46:32.84:0,33,473	1/1:28,0:27:22.90:305,23,0	1/1:18,0:17:2.83:14,3,0	1/1:27,0:25:3.22:24,3,0	1/1:24,2:24:6.98:252,7,0	0/1:24,0:24:7.65:8,0,319	0/1:18,0:18:12.22:12,0,229	0/0:11,0:11:9.03:0,9,136
chr10	75166044	.	CCAT	C	2138	PASS	AB=0.907;AC=20;AF=0.357;AN=56;BaseQRankSum=7.307;DP=779;FS=21.294;HRun=0;HaplotypeScore=222.8250;InbreedingCoeff=-0.0037;MQ=40.01;MQ0=66;MQRankSum=-4.947;QD=4.83;ReadPosRankSum=-1.890;VQSLOD=1.2328;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,6:33:17.27:278,17,0	0/0:9,0:8:17.98:0,18,337	0/0:25,4:6:8.82:0,9,97	0/1:25,2:7:33.22:33,0,202	0/0:23,0:20:33.10:0,33,625	0/1:30,0:29:6.18:6,0,927	0/0:21,0:21:38.02:0,38,798	0/0:40,0:32:76.64:0,77,1522	1/1:16,10:25:31.02:446,31,0	0/1:40,2:34:99:187,0,417	0/0:12,2:14:6.86:0,7,80	0/1:19,5:23:25.84:80,0,26	1/1:16,1:17:11.60:249,12,0	0/0:32,0:30:55.71:0,56,1163	0/0:28,0:27:72.02:0,72,1335	0/1:24,6:29:99:390,0,189	0/0:32,0:31:4.58:0,5,1142	0/1:16,2:17:99:117,0,199	0/0:23,0:15:1.13:0,1,302	0/0:22,0:21:10.42:0,10,183	0/0:59,0:50:33.66:0,34,446	0/1:24,10:35:9.26:249,0,9	1/1:20,4:21:1.70:5,2,0	0/1:21,8:25:18.23:18,0,35	0/1:22,3:22:99:189,0,103	0/1:32,0:32:3.99:4,0,512	0/1:18,0:17:19.24:19,0,274	0/1:14,1:13:35.01:35,0,159
chr10	75166045	.	CAT	C	323.30	PASS	AB=0.993;AC=19;AF=0.339;AN=56;BaseQRankSum=7.837;DP=786;FS=17.347;HRun=0;HaplotypeScore=222.1948;InbreedingCoeff=0.0204;MQ=40.04;MQ0=68;MQRankSum=-3.280;QD=0.76;ReadPosRankSum=-1.718;VQSLOD=1.1385;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:32:11.31:74,11,0	0/1:9,0:8:3.95:4,0,200	0/1:31,0:6:8.74:9,0,98	0/1:28,0:7:2.80:3,0,154	0/0:23,0:20:31.64:0,32,437	0/0:30,0:29:18.60:0,19,657	0/0:23,0:23:7.44:0,7,593	0/0:41,0:33:35.18:0,35,989	1/1:26,0:25:12.70:79,13,0	0/0:44,0:34:1.06:0,1,108	0/0:14,0:14:12.86:0,13,67	0/1:24,0:23:1.50:32,0,2	1/1:18,0:16:3.32:38,3,0	0/1:32,1:31:28.06:28,0,770	0/0:28,0:27:27:0,27,805	0/1:30,1:29:31.06:104,0,31	0/0:34,0:31:25.87:0,26,783	0/1:19,0:17:15.38:15,0,114	0/0:24,0:15:2.94:0,3,161	0/0:23,0:21:6.90:0,7,54	0/1:59,0:51:3.24:3,0,53	0/1:40,0:37:18.42:36,0,18	1/1:24,0:21:0.40:1,0,0	0/0:29,0:23:2.12:0,2,17	0/1:24,0:21:17.18:37,0,17	0/0:30,1:32:6.14:0,6,198	0/1:18,0:17:10.55:11,0,99	0/0:14,2:14:0.86:0,1,46
chr10	75166047	.	TAC	T	712.40	PASS	AB=0.985;AC=27;AF=0.482;AN=56;BaseQRankSum=7.978;DP=806;FS=0.000;HRun=0;HaplotypeScore=224.5192;InbreedingCoeff=0.3320;MQ=40.26;MQ0=71;MQRankSum=-3.594;QD=1.45;ReadPosRankSum=-0.054;VQSLOD=2.1494;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:31:0.82:0,1,3	0/0:9,0:8:9.03:0,9,140	0/0:33,0:6:8.05:0,8,86	0/0:30,1:8:18.51:0,19,214	0/0:23,0:20:24.02:0,24,320	0/0:29,0:28:30.37:0,30,532	0/0:23,1:24:5.89:0,6,438	0/0:43,0:35:32.46:0,32,627	0/1:26,0:25:18.83:19,0,19	1/1:44,0:34:1.01:154,1,0	1/1:15,0:15:8.77:51,9,0	0/1:25,0:23:0.01:0,0,0	1/1:18,1:17:10.20:54,10,0	0/1:30,3:32:10.64:11,0,632	0/0:26,2:27:16.22:0,16,616	1/1:32,0:30:31.35:166,31,0	0/0:35,0:31:15.43:0,15,567	0/1:20,0:17:40.84:45,0,41	0/1:26,0:16:8.72:47,0,9	0/0:23,0:21:1.08:0,1,19	1/1:64,0:55:0.15:1,0,0	1/1:40,0:37:2.61:7,3,0	1/1:25,0:22:0.87:1,1,0	1/1:31,0:24:1.42:5,1,0	1/1:26,0:23:20.33:131,20,0	0/1:29,0:29:18.87:79,0,19	0/1:18,0:17:4.50:64,0,4	1/1:16,0:14:8.49:42,8,0
chr10	75166055	.	C	CCAT	335.24	PASS	AB=0.973;AC=11;AF=0.196;AN=56;BaseQRankSum=7.494;DP=861;FS=13.245;HRun=0;HaplotypeScore=243.0265;InbreedingCoeff=0.1006;MQ=42.17;MQ0=74;MQRankSum=-5.516;QD=1.31;ReadPosRankSum=-3.813;VQSLOD=0.2422;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:34:16.01:107,0,16	0/0:10,0:9:18.06:0,18,327	0/0:46,0:8:23.18:0,23,328	0/0:38,0:8:24.08:0,24,411	0/0:22,0:21:39.12:0,39,689	0/0:31,0:29:62.38:0,62,1056	0/0:24,0:25:51.16:0,51,894	0/0:42,0:34:93.30:0,93,1572	1/1:26,0:26:2.08:108,2,0	0/0:48,0:38:11.44:0,11,818	0/0:16,0:16:11.79:0,12,177	0/1:28,0:26:29.19:29,0,76	0/1:19,1:18:13.86:75,0,14	0/0:34,0:32:81.25:0,81,1405	0/0:29,0:28:75.24:0,75,1312	0/1:29,0:28:17.59:18,0,419	0/0:33,0:29:56.04:0,56,1187	0/0:29,0:26:15.58:0,16,368	0/0:32,0:22:32.10:0,32,451	0/0:23,0:21:13.81:0,14,223	0/0:75,0:66:10.73:0,11,182	0/1:36,2:35:31.02:54,0,31	1/1:23,0:21:2.37:17,2,0	0/1:28,2:25:11.75:63,0,12	0/0:25,0:22:24.33:0,24,424	0/0:33,0:33:38.22:0,38,693	0/1:19,0:18:2.72:3,0,441	0/0:14,0:12:21.04:0,21,213
chr10	75166067	.	CACACACAT	C	2393.34	PASS	AB=0.932;AC=21;AF=0.375;AN=56;BaseQRankSum=6.357;DP=894;FS=5.986;HRun=0;HaplotypeScore=270.8425;InbreedingCoeff=0.2159;MQ=46.02;MQ0=49;MQRankSum=-1.981;QD=4.82;ReadPosRankSum=-2.708;VQSLOD=1.4651;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:36,7:37:25.39:292,0,25	0/0:6,0:6:12.01:0,12,425	0/0:62,0:16:32.84:0,33,523	0/0:48,0:14:29.25:0,29,538	0/0:20,0:18:36.09:0,36,1099	0/0:29,0:28:23.17:0,23,1781	0/0:27,0:27:63.12:0,63,1610	0/0:39,0:38:99:0,108,2182	1/1:11,17:27:22.39:275,22,0	0/1:51,0:42:99:198,0,197	0/1:22,0:22:8.17:8,0,48	0/1:7,19:24:25.23:67,0,25	1/1:8,13:21:2.01:332,2,0	0/0:30,0:29:72.19:0,72,2174	0/0:30,0:29:78.15:0,78,2142	0/0:28,0:28:35.65:0,36,212	0/0:26,0:23:50.57:0,51,1720	0/1:31,0:29:82.13:82,0,211	1/1:30,0:22:4.47:318,4,0	0/0:24,1:23:5.16:0,5,76	0/1:77,0:71:14.16:14,0,17	1/1:15,22:36:14.97:139,15,0	1/1:6,22:26:3.80:35,4,0	1/1:24,7:25:14.52:146,15,0	0/0:27,0:26:29.63:0,30,161	0/1:36,0:36:33.11:393,0,33	0/1:17,1:17:59.53:198,0,60	0/1:18,0:16:20.78:76,0,21
chr10	75166069	.	CACACAT	C	3648.39	PASS	AB=0.935;AC=29;AF=0.518;AN=56;BaseQRankSum=9.228;DP=883;FS=4.780;HRun=0;HaplotypeScore=249.7579;InbreedingCoeff=0.5157;MQ=46.44;MQ0=45;MQRankSum=-3.289;QD=6.48;ReadPosRankSum=1.597;VQSLOD=2.2170;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:45,0:39:27.51:196,0,28	0/0:5,0:5:12.01:0,12,349	0/0:62,0:16:31.92:0,32,461	0/0:49,0:15:31.97:0,32,422	0/0:19,0:17:33.07:0,33,910	0/0:30,0:29:27.14:0,27,1574	0/0:27,0:27:62.93:0,63,1319	0/0:39,0:39:99:0,111,1868	1/1:25,0:25:9.19:167,9,0	1/1:48,0:40:11.86:388,12,0	1/1:21,0:21:13.46:58,13,0	1/1:25,1:24:6.02:36,6,0	0/1:19,0:20:7.95:158,0,8	0/0:31,0:30:75.14:0,75,1830	0/0:32,0:31:81.15:0,81,1872	0/1:29,0:29:5.48:96,0,5	0/0:26,0:23:47.90:0,48,1449	0/1:31,0:29:91.90:92,0,127	1/1:10,19:22:28.83:628,29,0	0/1:8,17:23:0.91:1,0,17	1/1:12,61:68:2.82:20,3,0	0/1:36,0:35:2.03:14,0,2	1/1:27,0:26:0.41:2,0,0	0/1:30,0:24:1.73:59,0,2	1/1:26,1:26:21.27:112,21,0	1/1:9,25:34:21.12:883,21,0	1/1:7,12:18:6.15:385,6,0	1/1:6,12:16:21.06:353,21,0
chr10	75166071	.	CACAT	C	4695.28	PASS	AB=0.837;AC=32;AF=0.571;AN=56;BaseQRankSum=9.142;DP=861;FS=4.035;HRun=0;HaplotypeScore=225.0628;InbreedingCoeff=0.6884;MQ=46.72;MQ0=39;MQRankSum=-3.455;QD=9.01;ReadPosRankSum=1.281;VQSLOD=4.2250;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:42,1:38:1.09:222,1,0	0/0:5,0:5:12.01:0,12,271	0/0:62,0:16:31.34:0,31,405	0/0:52,0:17:31.22:0,31,480	0/0:18,0:17:36.07:0,36,720	0/0:30,0:29:29.73:0,30,1240	0/0:25,0:25:56.86:0,57,1060	0/0:41,0:41:99:0,109,1695	0/1:24,0:24:2.98:111,0,3	1/1:15,30:38:72.04:1059,72,0	1/1:2,18:20:11.26:196,11,0	1/1:25,0:23:0.48:16,0,0	1/1:20,0:20:13.75:132,14,0	0/0:29,0:29:64.75:0,65,1388	0/0:31,0:30:78.11:0,78,1472	1/1:12,18:30:36.11:656,36,0	0/0:25,0:23:44.96:0,45,1076	0/1:15,14:27:78.04:276,0,78	1/1:29,0:21:34.65:441,35,0	0/0:21,0:20:0.12:0,0,17	1/1:69,0:66:3.38:21,3,0	1/1:35,0:35:11.74:59,12,0	1/1:25,0:24:3.75:18,4,0	1/1:28,0:24:13.14:80,13,0	1/1:8,18:25:27.98:505,28,0	1/1:32,1:34:7.73:548,8,0	1/1:17,0:16:6.35:206,6,0	1/1:18,0:16:13.70:150,14,0
chr10	75166073	.	CATAT	C	2148.19	PASS	AB=0.961;AC=27;AF=0.482;AN=56;BaseQRankSum=10.558;DP=838;FS=0.000;HRun=0;HaplotypeScore=226.7347;InbreedingCoeff=0.4033;MQ=47.27;MQ0=36;MQRankSum=-5.578;QD=4.35;ReadPosRankSum=2.845;VQSLOD=2.3178;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:38:7.04:22,0,7	0/0:6,0:6:15.05:0,15,343	0/0:62,0:17:46.33:0,46,632	0/0:55,0:19:36.32:0,36,675	0/0:19,0:17:36.12:0,36,843	0/0:29,0:28:4.92:0,5,1417	0/0:26,0:26:60.06:0,60,1321	0/0:40,0:40:99:0,113,2297	0/1:23,0:23:16.48:72,0,16	1/1:40,2:35:51.28:545,51,0	1/1:18,0:18:8.78:106,9,0	0/0:24,0:23:3.01:0,3,11	1/1:19,0:19:3.07:104,3,0	0/0:26,0:26:66:0,66,1491	0/0:30,0:29:81.26:0,81,1787	1/1:24,1:26:36.09:459,36,0	0/0:26,0:24:46.64:0,47,1210	0/1:26,0:27:43.96:176,0,44	0/1:29,0:21:30.70:110,0,31	1/1:21,0:20:2.10:5,2,0	1/1:64,1:65:2.23:6,2,0	1/1:33,1:33:4.72:15,5,0	0/1:25,0:24:0.09:1,0,0	1/1:25,0:21:5.82:20,6,0	1/1:25,0:24:21.83:313,22,0	0/1:33,1:34:12.15:243,0,12	1/1:16,0:15:9.64:92,10,0	0/1:14,3:16:13:45,0,13
chr10	75166442	.	A	AT	4688.39	PASS	AB=0.960;AC=15;AF=0.268;AN=56;BaseQRankSum=-13.759;DP=643;FS=12.132;HRun=8;HaplotypeScore=71.7295;InbreedingCoeff=0.9202;MQ=66.18;MQ0=0;MQRankSum=-0.570;QD=24.17;ReadPosRankSum=4.128;VQSLOD=4.8750;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,34:39:96.29:1108,96,0	0/0:6,0:6:15.01:0,15,137	0/0:21,0:21:24.78:0,25,328	0/1:22,1:21:6.10:6,0,166	0/0:17,0:17:45.02:0,45,412	0/0:20,0:20:54.02:0,54,494	0/0:26,0:26:69.03:0,69,632	0/0:32,0:32:78.04:0,78,714	1/1:3,24:27:66.15:747,66,0	0/0:36,0:36:99:0,105,951	0/0:19,0:19:57.01:0,57,516	1/1:2,22:24:63.19:726,63,0	1/1:2,15:17:45.13:519,45,0	0/0:24,0:24:60.02:0,60,549	0/0:32,0:32:72.02:0,72,659	0/0:30,0:30:78.01:0,78,710	0/0:21,0:21:50.99:0,51,456	0/0:17,0:17:36.01:0,36,329	0/0:26,0:26:54.02:0,54,494	0/0:12,0:12:30.01:0,30,274	0/0:31,0:31:69.03:0,69,632	1/1:2,20:22:54.16:623,54,0	1/1:4,8:12:15.04:173,15,0	1/1:4,25:29:69.19:785,69,0	0/0:20,0:20:57.03:0,57,522	0/0:29,0:29:72.02:0,72,655	0/0:16,0:16:45.02:0,45,412	0/0:14,0:14:35.96:0,36,316
chr10	75166574	.	GGAATT	G	3832.59	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.835;DP=349;FS=5.394;HRun=0;HaplotypeScore=68.9656;InbreedingCoeff=0.9457;MQ=75.65;MQ0=0;MQRankSum=-9.132;QD=59.88;ReadPosRankSum=-2.071;VQSLOD=3.2337;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.29:0,84,2735	0/0:1,0:1:3.01:0,3,100	0/0:15,0:13:35.90:0,36,1072	0/0:14,0:13:9.80:0,10,1055	0/0:4,0:4:12.04:0,12,360	0/0:11,0:11:33.11:0,33,1099	0/0:13,0:13:39.12:0,39,1223	0/0:16,0:16:48.16:0,48,1505	0/0:15,0:15:45.15:0,45,1375	0/0:18,0:18:54.19:0,54,1711	0/0:13,0:13:39.13:0,39,1256	0/0:10,0:10:30.09:0,30,846	0/0:6,0:6:18.06:0,18,560	0/0:9,0:9:27.09:0,27,758	0/0:8,0:8:24.08:0,24,800	0/0:25,0:25:60.21:0,60,1999	0/0:16,0:16:48.16:0,48,1599	0/0:13,0:13:39.13:0,39,1298	1/1:0,13:13:39.13:890,39,0	1/1:0,10:10:30.10:648,30,0	1/1:1,14:15:30.10:642,30,0	0/0:10,0:10:30.09:0,30,925	0/0:15,0:15:45.15:0,45,1459	0/0:16,0:16:48.15:0,48,1523	0/0:9,0:9:27.09:0,27,899	1/1:0,9:9:27.05:536,27,0	1/1:0,9:9:27.09:628,27,0	1/1:0,8:8:21.07:489,21,0
chr10	75166627	.	AC	A	727.84	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=6.512;DP=231;FS=4.184;HRun=8;HaplotypeScore=46.3055;InbreedingCoeff=0.7131;MQ=94.50;MQ0=0;MQRankSum=-4.517;QD=6.93;ReadPosRankSum=4.287;VQSLOD=-0.0875;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:21.06:0,21,254	./.	0/0:15,0:13:16.74:0,17,155	0/0:18,0:19:30.90:0,31,308	0/0:3,0:3:9.03:0,9,109	0/0:3,0:3:9.03:0,9,109	0/0:5,0:5:6.02:0,6,72	0/0:9,0:9:12.01:0,12,124	0/0:7,0:7:12.03:0,12,134	1/1:17,0:17:10.10:20,10,0	1/1:10,0:10:3.53:6,4,0	0/0:5,0:5:9.03:0,9,108	0/0:3,0:3:6.02:0,6,72	0/0:8,0:8:24.06:0,24,276	0/0:5,0:5:15.03:0,15,169	1/1:21,0:21:11.68:25,12,0	0/0:5,0:5:15.02:0,15,167	0/0:16,0:16:0.25:0,0,29	1/1:2,1:3:3:29,3,0	1/1:2,1:3:3:29,3,0	1/1:6,7:13:20.97:191,21,0	0/0:4,0:4:12.04:0,12,145	0/0:3,0:3:3.01:0,3,36	0/0:4,0:4:3.01:0,3,36	1/1:13,0:13:1.96:6,2,0	1/1:5,6:11:24.03:231,24,0	1/1:2,4:6:15.02:141,15,0	1/1:1,7:8:24.04:231,24,0
chr10	75166633	.	CCCA	C	490.52	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=3.548;DP=210;FS=0.678;HRun=0;HaplotypeScore=50.9764;InbreedingCoeff=0.7642;MQ=96.21;MQ0=0;MQRankSum=-2.589;QD=6.63;ReadPosRankSum=3.053;VQSLOD=1.6053;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:24.06:0,24,457	./.	0/0:16,0:14:22.02:0,22,462	0/0:19,0:19:38.93:0,39,458	0/0:3,0:3:9.03:0,9,182	0/0:4,0:4:12.03:0,12,216	0/0:2,0:2:6:0,6,86	0/0:7,0:7:12:0,12,145	0/0:4,0:4:9.02:0,9,178	1/1:12,1:13:28.94:151,29,0	1/1:9,0:9:10.47:42,10,0	0/0:3,0:3:9.02:0,9,148	0/0:2,0:2:6.01:0,6,91	0/0:8,0:8:21.05:0,21,408	0/0:5,0:5:15.04:0,15,241	1/1:21,3:24:29.80:225,30,0	0/0:7,0:7:18.01:0,18,302	1/1:15,0:15:23.07:122,23,0	0/0:1,0:1:2.99:0,3,23	0/0:2,0:2:5.94:0,6,43	0/0:12,0:12:23.97:0,24,210	0/0:4,0:4:12.04:0,12,256	0/0:3,0:3:5.98:0,6,48	0/0:1,0:1:3.01:0,3,62	1/1:12,1:13:21.29:116,21,0	0/0:10,0:10:25.78:0,26,218	0/0:5,0:5:13.01:0,13,83	0/0:8,0:8:23.91:0,24,185
chr10	75166634	.	CCA	C	1596.14	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=0.456;DP=202;FS=1.371;HRun=0;HaplotypeScore=40.8068;InbreedingCoeff=0.7678;MQ=94.44;MQ0=0;MQRankSum=-2.421;QD=22.17;ReadPosRankSum=3.227;VQSLOD=3.6423;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:24.07:0,24,385	./.	0/0:15,0:13:27.58:0,28,389	0/0:18,0:18:38.05:0,38,416	0/0:3,0:3:9.03:0,9,145	0/0:4,0:4:12.03:0,12,180	0/0:2,0:2:6:0,6,76	0/0:7,0:7:12:0,12,134	0/0:4,0:4:9.02:0,9,155	1/1:7,6:13:32.93:455,33,0	1/1:2,5:7:12.04:174,12,0	0/0:3,0:3:9.03:0,9,127	0/0:2,0:2:6.02:0,6,83	0/0:8,0:8:21.06:0,21,339	0/0:5,0:5:15.03:0,15,225	1/1:7,17:24:33.03:412,33,0	0/0:7,0:7:18.01:0,18,253	1/1:11,4:15:37.53:400,38,0	0/0:1,0:1:2.74:0,3,12	0/0:3,0:3:7.54:0,8,53	0/0:10,0:10:22.58:0,23,127	0/0:4,0:4:12.04:0,12,207	0/0:2,0:2:5.99:0,6,49	0/0:2,0:2:6:0,6,75	1/1:6,7:13:25.30:321,25,0	0/0:9,0:9:16.36:0,16,122	0/0:5,0:5:5.13:0,5,36	0/0:8,0:8:22.28:0,22,101
chr10	75166635	.	CA	C	944.56	PASS	AB=1.000;AC=19;AF=0.352;AN=54;BaseQRankSum=6.522;DP=198;FS=9.659;HRun=1;HaplotypeScore=39.0935;InbreedingCoeff=0.6366;MQ=93.46;MQ0=0;MQRankSum=-3.446;QD=8.83;ReadPosRankSum=4.448;VQSLOD=0.4889;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:24.07:0,24,309	./.	0/0:15,1:14:8.10:0,8,307	0/0:15,1:16:40.19:0,40,367	0/0:3,0:3:9.02:0,9,110	0/0:4,0:4:12.03:0,12,147	0/0:3,0:3:9:0,9,89	0/0:6,0:6:12.01:0,12,124	0/0:3,0:3:9.03:0,9,121	1/1:8,5:13:32.16:205,32,0	1/1:5,2:7:11.82:76,12,0	0/0:3,0:3:9.01:0,9,94	0/0:2,0:2:6.01:0,6,64	0/0:7,0:7:21.07:0,21,274	0/0:5,0:5:15.04:0,15,186	1/1:20,4:24:32.41:206,32,0	0/0:7,0:7:18.02:0,18,208	1/1:11,2:13:38.67:279,39,0	1/1:1,0:1:2.88:15,3,0	0/1:3,0:3:17.98:18,0,40	0/1:11,0:11:23.94:24,0,24	0/0:4,0:4:12.04:0,12,163	0/0:2,0:2:5.99:0,6,50	0/0:2,0:2:6:0,6,64	1/1:8,5:13:24.94:145,25,0	0/1:9,0:9:4.36:23,0,4	1/1:4,1:5:12.09:74,12,0	1/1:8,0:8:19.63:72,20,0
chr10	75167628	.	A	AAAGG	14232.35	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-12.669;DP=670;FS=1.750;HRun=0;HaplotypeScore=95.7104;InbreedingCoeff=0.9279;MQ=73.36;MQ0=6;MQRankSum=0.658;QD=34.54;ReadPosRankSum=3.136;VQSLOD=5.0248;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,30:46:60.15:1414,60,0	0/0:4,0:4:8.82:0,9,116	0/0:40,0:22:25.74:0,26,280	0/0:38,0:27:2.58:0,3,309	0/0:26,0:26:66.21:0,66,1073	0/0:19,0:19:42.13:0,42,687	0/0:21,0:21:51.14:0,51,782	0/0:23,0:23:50.36:0,50,765	1/1:6,17:24:39.13:981,39,0	1/1:3,17:23:57.11:1064,57,0	1/1:2,5:7:14.97:288,15,0	1/1:3,19:22:27.09:679,27,0	1/1:4,13:17:6.02:151,6,0	0/0:18,0:18:45.13:0,45,730	0/0:28,0:28:60.19:0,60,996	1/1:8,20:28:45.12:1109,45,0	0/0:41,0:41:96.30:0,96,1603	1/1:7,17:25:33.11:816,33,0	1/1:7,11:19:36.11:733,36,0	1/1:1,14:16:33.07:639,33,0	1/1:5,33:39:51.18:1283,51,0	1/1:2,10:12:20.81:281,21,0	1/1:5,15:20:21.07:507,21,0	1/1:5,26:31:51.18:1260,51,0	1/1:6,21:26:27.09:679,27,0	1/1:4,21:26:66.18:1368,66,0	1/1:6,18:25:33.11:830,33,0	1/1:0,3:3:6.02:151,6,0
chr10	75170375	.	G	GGTGAGGCAC	25519.01	PASS	AB=0.577;AC=35;AF=0.625;AN=56;BaseQRankSum=-7.768;DP=561;FS=2.565;HRun=0;HaplotypeScore=130.5653;InbreedingCoeff=0.9039;MQ=55.80;MQ0=0;MQRankSum=-15.489;QD=78.04;ReadPosRankSum=0.716;VQSLOD=4.7293;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,28:34:72.25:2969,72,0	0/0:6,0:6:18.06:0,18,551	0/0:21,0:20:57.19:0,57,1454	0/0:20,0:20:54.19:0,54,1482	0/0:20,0:20:60.21:0,60,1826	0/0:14,0:14:42.14:0,42,1224	0/0:33,0:33:96.24:0,96,2556	0/0:35,0:35:90.30:0,90,2578	1/1:6,16:22:63.22:2573,63,0	1/1:10,6:20:51.16:1735,51,0	1/1:5,8:14:21.07:1014,21,0	1/1:1,18:22:33.11:1551,33,0	1/1:6,10:17:33.11:1495,33,0	0/0:22,0:22:63.22:0,63,1923	0/0:20,0:20:60.21:0,60,1726	1/1:3,11:16:21.07:892,21,0	0/0:43,0:43:99:0,126,3710	0/1:4,9:15:61.80:1235,0,62	1/1:6,5:13:27.07:971,27,0	1/1:4,13:19:33.11:1426,33,0	1/1:10,8:22:21.07:830,21,0	1/1:3,15:19:27.09:1247,27,0	1/1:1,7:12:21.07:1011,21,0	1/1:4,11:16:21.07:906,21,0	1/1:5,12:18:21.07:995,21,0	1/1:4,14:22:57.20:2376,57,0	1/1:2,14:16:45.15:2000,45,0	1/1:0,2:2:6.02:291,6,0
chr10	75173043	.	CA	C	3621.13	PASS	AB=0.975;AC=22;AF=0.393;AN=56;BaseQRankSum=-3.231;DP=502;FS=5.323;HRun=1;HaplotypeScore=69.0587;InbreedingCoeff=0.1113;MQ=81.61;MQ0=1;MQRankSum=-2.222;QD=13.46;ReadPosRankSum=-6.242;VQSLOD=0.0918;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:24,1:25:36.20:183,0,36	0/0:7,0:7:21.05:0,21,280	0/0:20,0:20:54.41:0,54,638	0/0:25,0:23:55.10:0,55,709	0/0:16,1:17:17.20:0,17,576	0/0:19,0:19:57.17:0,57,777	0/0:24,0:24:72.19:0,72,952	0/0:29,0:29:84.25:0,84,1137	0/1:23,0:23:54.69:55,0,74	1/1:5,13:18:48.96:609,49,0	1/1:4,9:13:36.09:432,36,0	0/1:21,0:21:26.52:27,0,90	0/1:13,0:13:20.36:20,0,43	0/0:13,0:13:39.02:0,39,497	0/0:18,0:18:54.16:0,54,734	1/1:0,12:12:30.10:418,30,0	0/0:29,0:29:75.22:0,75,1072	1/1:0,18:18:44.89:610,45,0	0/1:15,0:15:41.79:70,0,42	0/1:7,2:9:15.49:90,0,15	0/1:23,0:23:13.34:148,0,13	0/1:7,0:7:21.88:49,0,22	0/1:13,0:13:31.97:112,0,32	0/0:32,0:32:41.38:0,41,179	1/1:0,19:19:45.15:627,45,0	0/1:10,0:10:14.96:15,0,17	0/1:19,0:19:33.15:89,0,33	0/1:10,1:11:25.91:67,0,26
chr10	75174072	.	AAAATAAATAAATAAATAAATAAATAAATAAAT	A	5079.86	PASS	AB=0.646;AC=24;AF=0.545;AN=44;BaseQRankSum=8.427;DP=295;FS=0.000;HRun=0;HaplotypeScore=171.6936;InbreedingCoeff=0.5778;MQ=46.72;MQ0=16;MQRankSum=-1.804;QD=27.02;ReadPosRankSum=0.293;VQSLOD=3.5112;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:17:78.18:307,0,78	0/0:1,0:1:3.01:0,3,436	./.	./.	0/0:12,0:11:12.01:0,12,632	0/0:8,0:7:12.04:0,12,1673	0/0:7,0:7:9.03:0,9,1082	0/0:23,0:19:26.03:0,26,884	0/1:5,0:9:38.95:135,0,39	1/1:2,13:14:23.91:493,24,0	1/1:7,8:14:8.38:237,8,0	./.	0/0:9,0:7:6.02:0,6,75	./.	0/0:4,0:4:3.01:0,3,73	1/1:3,10:13:9.03:733,9,0	0/0:28,0:27:51.17:0,51,5751	1/1:16,0:12:9.85:86,10,0	1/1:5,13:17:39:796,39,0	1/1:11,14:24:11.96:395,12,0	./.	./.	0/0:2,0:2:2.99:0,3,24	1/1:1,0:2:3.01:144,3,0	1/1:3,13:16:9.03:600,9,0	1/1:5,12:17:20.23:604,20,0	1/1:6,11:17:6.02:489,6,0	1/1:7,0:6:8.92:62,9,0
chr10	75174095	.	AT	A	696.04	PASS	AB=1.000;AC=26;AF=0.565;AN=46;BaseQRankSum=9.245;DP=227;FS=3.285;HRun=1;HaplotypeScore=68.4745;InbreedingCoeff=0.5645;MQ=46.73;MQ0=9;MQRankSum=-5.269;QD=5.12;ReadPosRankSum=3.334;VQSLOD=0.9606;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:14.69:15,0,79	0/0:1,0:1:3.01:0,3,46	./.	./.	0/0:9,0:8:21.04:0,21,264	0/0:6,0:6:12.04:0,12,184	0/0:4,0:4:12.04:0,12,177	0/0:28,0:22:65.15:0,65,830	0/0:6,0:6:1.35:0,1,41	1/1:14,0:13:11.23:65,11,0	1/1:8,0:8:5.87:34,6,0	1/1:2,0:2:2.74:12,3,0	0/1:6,0:6:22.76:23,0,24	./.	0/0:4,0:4:12.03:0,12,160	1/1:10,0:10:7.11:25,7,0	0/0:29,0:28:75.24:0,75,1085	1/1:8,4:10:20.69:153,21,0	1/1:13,0:13:29.73:261,30,0	1/1:14,0:14:8.87:61,9,0	./.	./.	0/0:2,0:2:3.46:0,3,25	1/1:1,0:1:2.22:7,2,0	1/1:14,0:13:8.30:49,8,0	1/1:12,0:12:13.68:80,14,0	1/1:11,0:11:4.74:16,5,0	1/1:0,4:4:8.92:62,9,0
chr10	75174099	.	AT	A	400.34	PASS	AB=1.000;AC=33;AF=0.688;AN=48;BaseQRankSum=8.308;DP=221;FS=2.829;HRun=1;HaplotypeScore=67.1455;InbreedingCoeff=0.6204;MQ=47.53;MQ0=7;MQRankSum=-7.077;QD=2.82;ReadPosRankSum=1.910;VQSLOD=-0.2226;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:7.75:54,8,0	0/0:1,0:1:3.01:0,3,46	./.	./.	0/0:8,0:7:18.06:0,18,256	0/0:6,0:6:12.04:0,12,184	0/0:4,0:4:12.04:0,12,177	0/0:25,0:19:54.17:0,54,746	1/1:4,0:4:2.37:9,2,0	1/1:13,0:13:5.14:25,5,0	1/1:8,0:8:5.85:34,6,0	1/1:0,3:3:3.01:33,3,0	1/1:0,10:10:11.96:115,12,0	./.	0/0:5,0:5:15.05:0,15,217	1/1:10,0:10:6.66:21,7,0	0/0:30,0:29:78.20:0,78,1102	1/1:10,0:9:12.18:70,12,0	1/1:13,0:13:11.25:71,11,0	1/1:14,0:14:5.12:23,5,0	1/1:2,0:2:0.47:1,0,0	./.	1/1:0,1:1:3.01:35,3,0	1/1:1,0:1:2.50:9,2,0	1/1:14,0:13:7.38:32,7,0	1/1:12,0:12:4.44:14,4,0	1/1:11,0:11:4.44:14,4,0	0/1:4,0:4:0:0,0,0
chr10	75174103	.	AT	A	757.89	PASS	AB=1.000;AC=27;AF=0.540;AN=50;BaseQRankSum=8.564;DP=222;FS=7.816;HRun=1;HaplotypeScore=62.1682;InbreedingCoeff=0.6303;MQ=48.22;MQ0=7;MQRankSum=-2.635;QD=5.92;ReadPosRankSum=-0.318;VQSLOD=0.0261;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:5.33:5,0,32	0/0:1,0:1:3.01:0,3,46	./.	./.	0/0:9,0:8:21.06:0,21,282	0/0:6,0:6:12.04:0,12,184	0/0:4,0:4:12.04:0,12,177	0/0:24,0:19:57.14:0,57,778	1/1:4,0:4:2.04:6,2,0	1/1:13,0:13:17.34:142,17,0	1/1:8,0:8:8.99:94,9,0	0/0:3,0:3:1.82:0,2,5	0/0:10,0:10:2.65:0,3,23	./.	0/0:4,0:4:12.04:0,12,176	1/1:10,0:10:7.11:23,7,0	0/0:29,0:28:75.24:0,75,1078	1/1:1,9:9:12.04:155,12,0	1/1:13,0:13:21:223,21,0	1/1:14,0:14:8.35:64,8,0	1/1:1,0:1:3:27,3,0	0/0:1,0:1:3:0,3,25	0/0:3,0:3:7.56:0,8,69	1/1:1,0:1:2.04:6,2,0	1/1:13,1:13:7.75:53,8,0	1/1:12,0:12:10.74:68,11,0	1/1:11,0:11:4.74:15,5,0	1/1:2,0:2:5.99:50,6,0
chr10	75174760	.	A	ACCCC	8671.47	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=3.573;DP=530;FS=3.913;HRun=4;HaplotypeScore=105.8792;InbreedingCoeff=0.9919;MQ=65.59;MQ0=11;MQRankSum=0.873;QD=26.60;ReadPosRankSum=2.805;VQSLOD=1.3706;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:22:51.26:349,51,0	0/0:12,0:12:33.11:0,33,548	0/0:25,0:15:29.75:0,30,404	0/0:26,0:16:38.21:0,38,590	0/0:14,0:14:42.06:0,42,590	0/0:22,0:22:54.17:0,54,826	0/0:13,0:13:36.12:0,36,592	0/0:29,0:29:78.22:0,78,1225	1/1:1,0:32:29.88:302,30,0	1/1:3,0:9:24:293,24,0	1/1:3,0:14:31.23:279,31,0	1/1:1,0:19:36.54:212,37,0	1/1:0,0:11:28.69:165,29,0	0/0:20,0:20:54.18:0,54,898	0/0:17,0:17:45.15:0,45,757	1/1:2,0:15:30.98:334,31,0	0/0:23,0:25:61.75:0,62,907	1/1:2,0:7:18:201,18,0	1/1:3,9:11:24.07:484,24,0	1/1:3,17:22:51.17:1070,51,0	1/1:2,13:13:18.06:480,18,0	1/1:2,0:19:26.32:156,26,0	1/1:4,0:16:12.29:209,12,0	1/1:0,0:26:38.17:254,38,0	1/1:2,0:13:31.31:373,31,0	1/1:3,24:30:66.18:1492,66,0	1/1:3,17:20:38.73:975,39,0	1/1:1,14:16:42.14:1042,42,0
chr10	75174763	.	CCA	C	287.60	PASS	AB=0.914;AC=10;AF=0.179;AN=56;BaseQRankSum=-1.190;DP=553;FS=5.293;HRun=0;HaplotypeScore=115.4397;InbreedingCoeff=-0.0149;MQ=64.27;MQ0=12;MQRankSum=1.451;QD=1.82;ReadPosRankSum=-0.651;VQSLOD=1.9233;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:18.99:0,19,389	0/0:13,0:13:30.07:0,30,430	0/1:27,2:16:41.23:41,0,293	0/0:28,0:16:28.06:0,28,363	0/1:12,3:15:68.19:68,0,379	0/1:17,4:21:97.86:98,0,450	0/1:11,1:12:8.66:9,0,355	0/0:34,2:36:27.90:0,28,844	0/0:32,0:32:45.50:0,46,632	0/1:13,0:10:5.98:15,0,6	0/1:17,0:16:31.66:32,0,46	0/0:19,0:19:36.53:0,37,358	0/0:12,0:12:30.04:0,30,291	0/1:19,0:19:16.89:17,0,709	0/0:16,1:17:6.39:0,6,585	0/0:16,0:15:2.65:0,3,9	0/1:18,7:25:99:126,0,523	1/1:7,0:7:2.78:21,3,0	0/0:14,0:11:23.96:0,24,229	0/0:25,0:24:46.42:0,46,451	0/0:17,0:15:24.03:0,24,241	0/0:17,0:17:27.05:0,27,267	0/0:16,0:16:42.08:0,42,415	0/0:29,0:29:45.54:0,46,450	0/0:13,0:13:3.73:0,4,12	0/0:31,0:31:60.09:0,60,625	0/0:19,0:19:39.06:0,39,379	0/0:16,0:16:39.56:0,40,413
chr10	75175507	.	C	CT	7259.29	PASS	AB=0.600;AC=35;AF=0.625;AN=56;BaseQRankSum=-11.516;DP=541;FS=15.991;HRun=10;HaplotypeScore=55.6834;InbreedingCoeff=0.8814;MQ=68.05;MQ0=0;MQRankSum=0.277;QD=21.73;ReadPosRankSum=3.177;VQSLOD=4.2415;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,35:41:37.93:814,38,0	0/0:16,0:16:32.96:0,33,271	0/0:15,0:13:3.39:0,3,106	0/0:9,0:9:14.97:0,15,123	0/0:18,0:19:37.96:0,38,301	0/0:30,0:30:77.74:0,78,626	0/0:26,0:26:53.93:0,54,443	0/0:30,0:30:71.83:0,72,588	1/1:4,14:18:11.28:327,11,0	1/1:5,22:27:63.13:657,63,0	1/1:5,16:21:51.13:542,51,0	1/1:4,19:23:54.11:565,54,0	1/1:4,9:12:21.05:224,21,0	0/0:10,0:10:29.95:0,30,244	0/0:23,0:23:56.89:0,57,465	1/1:2,12:13:27.07:288,27,0	0/0:29,0:29:74.88:0,75,613	1/1:4,21:25:57.14:608,57,0	1/1:2,14:16:42.09:439,42,0	1/1:2,4:6:9.02:96,9,0	1/1:3,10:13:30.08:320,30,0	1/1:3,12:15:21.01:212,21,0	0/1:4,8:12:25.22:168,0,25	1/1:2,18:20:45.10:472,45,0	1/1:3,12:15:30.08:320,30,0	1/1:8,19:27:38.52:600,39,0	1/1:5,16:21:36.09:384,36,0	1/1:1,6:7:21.05:223,21,0
chr10	75175795	.	A	AC	2422.82	PASS	AB=0.765;AC=34;AF=0.630;AN=54;BaseQRankSum=0.219;DP=392;FS=0.498;HRun=8;HaplotypeScore=64.1920;InbreedingCoeff=0.7335;MQ=85.60;MQ0=1;MQRankSum=-1.745;QD=11.59;ReadPosRankSum=1.304;VQSLOD=2.5274;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:48.14:554,48,0	0/0:18,0:18:54.02:0,54,491	0/1:24,0:20:15.87:16,0,147	0/0:40,0:25:1.29:0,1,178	0/0:18,0:18:54.02:0,54,491	0/0:12,0:12:30.02:0,30,275	0/0:14,0:14:29.83:0,30,269	0/0:26,1:27:59.99:0,60,545	1/1:0,9:9:21.06:242,21,0	1/1:6,0:14:17.33:101,17,0	1/1:4,0:13:17.06:87,17,0	1/1:1,12:13:24.07:277,24,0	0/1:3,10:12:15.03:92,0,15	0/0:11,0:11:32.98:0,33,295	0/0:21,0:21:38.97:0,39,349	1/1:5,0:6:11.40:57,11,0	0/0:19,0:19:54.03:0,54,494	1/1:5,1:15:28.49:147,28,0	1/1:1,0:5:11.36:58,11,0	1/1:2,0:6:5.68:29,6,0	1/1:2,1:12:17.25:107,17,0	./.	1/1:1,8:9:21.06:242,21,0	1/1:1,13:14:33.10:381,33,0	1/1:4,0:13:17.19:92,17,0	1/1:1,1:7:14.52:101,15,0	1/1:4,0:7:5.68:29,6,0	1/1:0,0:2:2.84:14,3,0
chr10	75177184	.	GT	G	759.97	PASS	AB=0.718;AC=10;AF=0.179;AN=56;BaseQRankSum=-1.336;DP=628;FS=5.056;HRun=16;HaplotypeScore=99.5050;InbreedingCoeff=0.0879;MQ=73.01;MQ0=1;MQRankSum=-0.624;QD=3.64;ReadPosRankSum=2.890;VQSLOD=1.0184;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:41:46.46:0,46,236	0/0:10,0:10:11.78:0,12,83	0/0:28,0:21:20.61:0,21,144	0/0:12,1:10:11.98:0,12,99	0/0:17,3:22:16.90:0,17,280	0/1:17,4:24:23.47:23,0,243	0/0:21,3:24:14.91:0,15,225	0/0:27,4:31:5.80:0,6,309	0/0:8,0:23:24.85:0,25,122	0/0:8,0:24:54.99:0,55,336	0/0:7,1:21:27.29:0,27,245	0/0:3,0:8:11.67:0,12,69	0/0:9,0:23:26.06:0,26,163	0/1:21,1:22:3.11:3,0,184	0/0:27,0:31:52.44:0,52,415	0/0:10,0:15:22.36:0,22,203	0/1:13,3:16:12.15:12,0,113	0/0:3,0:15:20.04:0,20,110	1/1:9,15:26:49.47:281,49,0	0/1:10,15:25:12.61:154,0,13	0/1:10,13:26:16.27:110,0,16	0/0:4,0:24:42.73:0,43,241	0/0:7,0:19:29.66:0,30,159	0/0:1,0:21:25.40:0,25,124	0/0:12,1:24:39.12:0,39,244	0/1:11,14:26:51.94:132,0,52	0/1:14,16:31:37.30:118,0,37	0/1:3,10:13:4.30:72,0,4
chr10	75178863	.	AAAACAAACAAAC	A	11165.32	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.411;DP=679;FS=16.105;HRun=0;HaplotypeScore=224.6931;InbreedingCoeff=0.9806;MQ=60.66;MQ0=2;MQRankSum=-11.796;QD=50.29;ReadPosRankSum=-0.661;VQSLOD=3.1219;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,102,4828	0/0:10,0:10:24.06:0,24,1067	0/0:25,0:16:21.07:0,21,817	0/0:22,0:14:21.54:0,22,903	0/0:30,0:30:72.25:0,72,4013	0/0:22,0:22:57.18:0,57,2820	0/0:20,0:20:54.19:0,54,2933	0/0:20,0:20:33.10:0,33,1389	0/0:25,0:25:72.25:0,72,3889	1/1:10,21:31:60.16:1760,60,0	1/1:2,11:13:24.08:782,24,0	0/0:17,0:17:36.12:0,36,2062	0/0:33,0:33:93.32:0,93,5207	0/0:16,0:16:30.10:0,30,1666	0/0:32,0:32:60.20:0,60,3319	1/1:3,15:18:32.84:1166,33,0	0/0:42,0:42:99:0,108,5425	1/1:5,16:21:18.06:587,18,0	1/1:8,12:19:36.12:1043,36,0	1/1:5,19:24:48.12:1399,48,0	1/1:7,16:23:18.06:616,18,0	0/0:26,0:26:63.20:0,63,3399	0/0:23,0:23:57.14:0,57,2835	0/0:53,0:53:99:0,136,7309	1/1:4,14:18:27.09:954,27,0	1/1:6,12:18:36.12:1057,36,0	1/1:9,23:32:44.94:1591,45,0	1/1:1,3:4:6.02:212,6,0
chr10	75179367	.	AGT	A	119.50	PASS	AB=0.942;AC=14;AF=0.259;AN=54;BaseQRankSum=4.922;DP=462;FS=1.743;HRun=0;HaplotypeScore=95.6155;InbreedingCoeff=0.2155;MQ=64.68;MQ0=2;MQRankSum=-1.282;QD=0.72;ReadPosRankSum=-0.316;VQSLOD=1.9369;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:11.16:0,11,96	0/1:4,1:5:24.77:25,0,62	0/0:32,0:20:2.90:0,3,16	0/0:28,0:12:3.01:0,3,38	0/0:17,0:17:18.06:0,18,273	0/1:14,1:15:8.49:8,0,333	0/0:16,1:17:5.34:0,5,491	0/0:27,0:26:17.33:0,17,234	0/0:11,0:11:4.62:0,5,55	0/0:17,0:17:31.47:0,31,283	0/0:14,0:12:2.99:0,3,23	0/0:12,0:12:0.49:0,0,17	0/0:13,0:13:2.80:0,3,14	./.	0/0:7,0:7:15.04:0,15,198	0/0:10,0:10:5.95:0,6,54	0/1:25,3:29:29.33:29,0,560	0/0:14,0:14:8.81:0,9,70	0/1:16,0:15:9.08:35,0,9	1/1:20,0:20:13.08:53,13,0	0/1:42,0:43:11.30:11,0,20	0/1:10,0:10:0.02:0,0,0	0/0:7,0:7:2.99:0,3,24	0/0:23,0:24:2.19:0,2,5	0/0:13,0:13:0:0,0,0	1/1:12,0:12:2.98:19,3,0	1/1:12,0:12:6.82:40,7,0	1/1:3,0:3:8.32:42,8,0
chr10	75179398	.	GTGTA	G	1828.31	PASS	AB=0.949;AC=20;AF=0.357;AN=56;BaseQRankSum=3.845;DP=493;FS=23.568;HRun=0;HaplotypeScore=104.0031;InbreedingCoeff=0.1452;MQ=47.75;MQ0=16;MQRankSum=0.921;QD=7.49;ReadPosRankSum=0.681;VQSLOD=1.0102;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,1:26:36.47:48,0,36	0/0:10,0:10:23.90:0,24,242	0/0:34,0:7:2.28:0,2,71	0/0:43,0:11:29.66:0,30,234	0/0:13,0:13:30.02:0,30,583	0/0:18,0:18:25.93:0,26,799	0/0:19,0:19:56.18:0,56,938	0/0:27,0:27:40:0,40,845	0/1:11,0:11:29.39:29,0,52	0/0:16,0:16:4.40:0,4,482	0/0:14,0:11:11.09:0,11,96	0/1:11,0:11:31.80:35,0,32	0/1:11,0:11:11.95:12,0,46	0/0:8,0:8:17.69:0,18,200	0/0:7,0:7:18.03:0,18,339	0/1:13,0:13:31.91:32,0,95	0/0:32,0:32:67.11:0,67,1351	0/1:16,0:16:73.16:73,0,190	1/1:4,14:17:41.97:507,42,0	1/1:1,17:18:15.52:280,16,0	0/1:4,32:36:26.10:139,0,26	0/1:10,0:10:17.43:17,0,43	0/0:6,0:6:2.99:0,3,78	0/1:23,0:23:85.05:85,0,96	0/1:13,0:13:13.44:13,0,108	1/1:17,1:17:27.52:355,28,0	1/1:2,12:14:18:252,18,0	1/1:4,2:5:7.12:132,7,0
chr10	75179440	.	T	TTA	4818.30	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-7.976;DP=428;FS=1.469;HRun=0;HaplotypeScore=73.0938;InbreedingCoeff=0.9279;MQ=65.13;MQ0=1;MQRankSum=-1.466;QD=35.96;ReadPosRankSum=4.699;VQSLOD=7.1311;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,12:15:33.11:561,33,0	0/0:12,0:12:36.09:0,36,451	0/0:10,0:6:5.34:0,5,75	0/0:15,0:14:19.28:0,19,216	0/0:14,0:14:42.14:0,42,545	0/0:20,0:20:54.16:0,54,688	0/0:13,0:13:36.11:0,36,455	0/0:35,0:35:93.27:0,93,1160	1/1:2,6:9:15.05:255,15,0	1/1:2,18:20:54.18:912,54,0	1/1:2,12:14:33.11:548,33,0	1/1:3,1:4:3.01:51,3,0	1/1:2,8:10:21.07:357,21,0	0/0:15,0:15:36.12:0,36,467	0/0:9,0:9:27.09:0,27,351	1/1:0,8:8:18.06:306,18,0	0/0:27,0:27:72.22:0,72,917	1/1:0,18:18:48.16:804,48,0	0/0:23,0:23:45.13:0,45,560	0/0:25,0:25:51.16:0,51,659	0/0:11,0:11:9.03:0,9,117	1/1:3,3:6:6.02:102,6,0	1/1:1,8:9:18.06:306,18,0	1/1:4,7:10:19.62:310,20,0	1/1:1,9:10:18.06:306,18,0	0/0:32,0:32:90.28:0,90,1157	0/0:23,0:23:54.18:0,54,702	0/0:10,0:10:24.08:0,24,312
chr10	75179914	.	GT	G	1416.39	PASS	AB=0.970;AC=11;AF=0.196;AN=56;BaseQRankSum=8.015;DP=539;FS=1.594;HRun=9;HaplotypeScore=68.9267;InbreedingCoeff=0.8805;MQ=80.52;MQ0=0;MQRankSum=1.529;QD=13.75;ReadPosRankSum=-2.446;VQSLOD=3.2547;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:69.14:0,69,764	0/0:10,0:10:30.09:0,30,346	0/0:30,0:26:24.25:0,24,438	0/1:31,1:27:39.26:39,0,196	0/0:21,1:22:39.38:0,39,621	0/0:25,0:25:66.20:0,66,762	0/0:22,0:22:60.18:0,60,692	0/0:15,0:15:39.11:0,39,448	0/0:15,0:15:21.06:0,21,241	1/1:4,16:20:48:433,48,0	1/1:3,14:17:45.02:410,45,0	0/0:10,0:10:24.07:0,24,277	0/0:15,0:15:27.08:0,27,311	0/0:11,0:11:30.07:0,30,335	0/0:13,0:13:32.87:0,33,349	1/1:0,11:11:24.01:218,24,0	0/0:41,0:41:99:0,120,1375	1/1:1,14:15:36.02:329,36,0	0/0:17,0:18:38.98:0,39,428	0/0:21,0:21:60.16:0,60,682	0/0:20,0:20:45.13:0,45,519	0/0:13,0:13:33.10:0,33,377	0/0:28,0:28:71.95:0,72,829	0/0:25,0:25:27.43:0,27,562	1/1:0,8:8:18.01:165,18,0	0/0:23,0:22:55.72:0,56,627	0/0:18,0:18:44.87:0,45,498	0/0:13,0:13:18.05:0,18,207
chr10	75179994	.	G	GAACA	5596.93	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=4.405;DP=495;FS=7.050;HRun=0;HaplotypeScore=108.8097;InbreedingCoeff=0.8142;MQ=68.94;MQ0=4;MQRankSum=-2.829;QD=17.88;ReadPosRankSum=0.100;VQSLOD=4.1609;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:42.37:500,42,0	0/0:8,0:8:17.95:0,18,204	0/0:17,0:11:6.87:0,7,130	0/0:24,0:15:17.75:0,18,137	0/0:14,0:14:35.06:0,35,434	0/0:17,0:17:42.88:0,43,476	0/0:29,0:29:64.56:0,65,578	0/0:22,0:21:53:0,53,438	1/1:16,0:16:11.83:160,12,0	1/1:18,0:18:33.12:441,33,0	1/1:12,2:14:29.78:347,30,0	1/1:1,12:14:9.03:221,9,0	1/1:9,0:9:6.02:123,6,0	0/0:17,0:17:44.62:0,45,375	0/1:17,0:17:94.30:94,0,290	1/1:18,1:19:45.02:601,45,0	0/0:34,0:33:84.03:0,84,991	1/1:15,1:14:26.32:277,26,0	1/1:13,0:12:23.85:213,24,0	1/1:9,0:9:17.98:200,18,0	1/1:16,0:16:0.91:55,1,0	1/1:21,0:21:20.84:195,21,0	1/1:17,0:17:41.83:483,42,0	1/1:9,22:32:17.77:393,18,0	1/1:14,0:14:29.05:405,29,0	1/1:19,0:19:51.09:624,51,0	1/1:14,0:14:5.93:80,6,0	1/1:6,0:6:9.03:185,9,0
chr10	75179995	.	A	AACAAACACACAC	7207.82	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=3.225;DP=551;FS=1.465;HRun=0;HaplotypeScore=191.8800;InbreedingCoeff=0.9185;MQ=65.38;MQ0=5;MQRankSum=-3.526;QD=20.83;ReadPosRankSum=-1.441;VQSLOD=3.8546;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:44.89:637,45,0	0/0:5,0:8:18.01:0,18,372	0/0:17,0:11:6.87:0,7,130	0/0:23,0:14:14.53:0,15,130	0/0:13,0:14:35.06:0,35,693	0/0:17,0:18:45:0,45,780	0/0:26,0:29:31.31:0,31,679	0/0:23,0:22:55.18:0,55,445	1/1:4,0:19:11.28:209,11,0	1/1:19,0:20:37.68:491,38,0	1/1:14,0:15:29.98:305,30,0	1/1:15,0:16:12:221,12,0	1/1:1,0:11:6.49:133,6,0	0/0:15,0:16:44.62:0,45,487	0/0:12,0:19:44.47:0,44,479	1/1:18,0:19:45:500,45,0	0/0:35,0:36:89.43:0,89,1563	1/1:18,0:16:34.33:297,34,0	1/1:14,0:13:23.82:212,24,0	1/1:15,0:14:17.98:247,18,0	1/1:4,0:18:0.91:121,1,0	1/1:6,0:27:23.85:249,24,0	1/1:17,0:17:41.97:541,42,0	1/1:32,0:35:20.60:299,21,0	1/1:11,0:15:32.94:519,33,0	1/1:22,0:22:57.10:796,57,0	1/1:10,9:22:17.98:709,18,0	1/1:2,5:8:15.05:722,15,0
chr10	75180513	.	AT	A	11891.45	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=15.930;DP=736;FS=2.568;HRun=9;HaplotypeScore=69.6705;InbreedingCoeff=0.9999;MQ=70.74;MQ0=0;MQRankSum=-2.289;QD=23.93;ReadPosRankSum=4.255;VQSLOD=5.6556;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,34:37:90.05:822,90,0	0/0:18,0:18:51.15:0,51,588	0/0:19,0:20:38.46:0,38,403	0/0:11,0:11:28.62:0,29,276	0/0:32,0:32:87.25:0,87,995	0/0:26,0:26:63.18:0,63,718	0/0:23,0:23:57.14:0,57,639	0/0:31,0:33:78.05:0,78,869	1/1:1,36:37:99:961,105,0	1/1:3,20:23:60.03:549,60,0	1/1:3,23:26:63.02:574,63,0	1/1:2,20:22:57.03:522,57,0	1/1:2,30:32:81.04:741,81,0	0/0:23,0:23:63.19:0,63,726	0/0:29,0:29:75.64:0,76,825	1/1:1,20:21:57.03:522,57,0	0/0:24,0:24:72.21:0,72,830	1/1:1,20:21:57.03:522,57,0	1/1:5,24:29:72.01:653,72,0	1/1:1,31:32:89.96:823,90,0	1/1:4,20:24:57.02:522,57,0	1/1:1,31:32:87.05:796,87,0	1/1:4,19:23:54.03:494,54,0	1/1:2,23:25:66.04:604,66,0	1/1:1,18:19:48.03:439,48,0	1/1:6,42:48:99:1139,126,0	1/1:0,30:30:87.05:796,87,0	1/1:1,15:16:45.02:412,45,0
chr10	75181016	.	T	TAAGG	717.53	PASS	AB=0.865;AC=21;AF=0.389;AN=54;BaseQRankSum=0.892;DP=248;FS=0.954;HRun=0;HaplotypeScore=61.8019;InbreedingCoeff=0.3133;MQ=52.10;MQ0=44;MQRankSum=0.612;QD=7.18;ReadPosRankSum=-0.003;VQSLOD=1.9838;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:8:2.04:44,2,0	0/0:8,0:6:14.88:0,15,182	0/1:24,0:7:4.10:4,0,240	0/0:20,0:7:14.03:0,14,164	0/0:19,0:17:30.55:0,31,560	0/0:12,0:12:22.89:0,23,436	0/0:19,0:18:35.65:0,36,683	0/0:16,0:14:34:0,34,540	0/0:3,0:3:8.49:0,8,85	0/0:2,0:1:0.89:0,1,2	0/0:2,0:5:2.49:0,2,6	0/1:5,0:3:2.41:45,0,2	1/1:3,0:1:3:25,3,0	0/0:4,0:4:7.27:0,7,128	0/0:5,0:5:13.78:0,14,174	0/1:1,0:4:12.21:80,0,12	0/0:26,0:19:26.30:0,26,419	0/1:6,0:4:34.23:34,0,104	0/1:6,0:6:76.91:77,0,90	1/1:1,2:4:9.03:155,9,0	0/1:5,0:3:0.25:32,0,0	0/0:3,0:2:2.13:0,2,5	1/1:0,0:3:6.02:97,6,0	1/1:2,1:5:6.02:93,6,0	1/1:3,0:2:6:91,6,0	1/1:3,0:2:2.04:25,2,0	0/1:9,0:8:30.85:77,0,31	./.
chr10	75181125	.	GC	G	5782.86	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=13.794;DP=365;FS=2.464;HRun=5;HaplotypeScore=68.2096;InbreedingCoeff=0.9536;MQ=53.59;MQ0=17;MQRankSum=-7.020;QD=28.35;ReadPosRankSum=2.339;VQSLOD=5.3104;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:14:39.11:442,39,0	0/0:3,0:3:9.03:0,9,123	0/0:10,0:10:30.10:0,30,404	0/0:7,0:6:18.05:0,18,223	0/0:18,0:18:48.16:0,48,656	0/0:15,0:14:39.13:0,39,533	0/0:28,0:28:78.18:0,78,1011	0/0:21,0:19:48.11:0,48,617	1/1:0,10:10:30.09:340,30,0	1/1:1,8:8:24.07:272,24,0	1/1:1,12:13:33.08:364,33,0	1/1:0,13:13:39.11:442,39,0	1/1:1,4:4:12.03:136,12,0	0/0:3,0:3:9.03:0,9,123	0/0:18,0:16:48.16:0,48,656	1/1:0,7:7:21.06:238,21,0	0/0:38,0:37:99:0,105,1436	1/1:2,5:5:12.03:135,12,0	1/1:2,12:11:30.07:330,30,0	1/1:0,11:11:33.09:374,33,0	1/1:2,9:10:17.68:204,18,0	1/1:1,7:7:21.06:238,21,0	1/1:0,10:10:30.09:340,30,0	1/1:4,13:14:33.09:374,33,0	1/1:2,10:10:30.09:340,30,0	1/1:1,21:20:60.16:671,60,0	1/1:0,14:14:42.12:476,42,0	1/1:1,2:2:6.02:68,6,0
chr10	75181153	.	A	AT	3059.46	PASS	AB=0.718;AC=22;AF=0.407;AN=54;BaseQRankSum=-0.300;DP=425;FS=0.914;HRun=10;HaplotypeScore=91.1250;InbreedingCoeff=0.5432;MQ=73.44;MQ0=0;MQRankSum=-6.155;QD=15.77;ReadPosRankSum=-2.200;VQSLOD=3.4285;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,15:21:17.47:387,17,0	0/0:2,0:2:5.99:0,6,49	0/1:14,1:15:20.16:20,0,84	0/0:13,0:13:29.56:0,30,224	0/1:9,1:10:11.04:11,0,123	0/0:18,1:19:15.93:0,16,334	0/0:26,1:27:33.93:0,34,485	0/0:18,0:18:32.94:0,33,269	0/1:8,7:15:0.58:200,0,1	0/1:4,9:13:19.19:214,0,19	1/1:4,15:19:23.48:455,23,0	0/1:7,11:19:13.20:277,0,13	1/1:3,7:10:2.27:212,2,0	0/0:8,0:8:17.97:0,18,148	0/0:12,0:12:29.95:0,30,243	0/1:2,6:8:3.59:171,0,4	0/0:35,0:35:83.86:0,84,689	1/1:1,8:9:18.05:192,18,0	0/0:20,0:20:43.96:0,44,351	0/0:14,0:14:20.96:0,21,172	0/0:20,0:19:49.97:0,50,400	1/1:3,10:13:33.08:346,33,0	1/1:4,6:11:21.04:218,21,0	1/1:6,9:16:27.07:288,27,0	1/1:3,11:14:5.45:263,5,0	0/0:22,0:22:56.91:0,57,468	0/0:14,0:17:33.05:0,33,239	./.
chr10	75181392	.	TGGG	T	10725.34	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=9.677;DP=537;FS=2.573;HRun=11;HaplotypeScore=133.3809;InbreedingCoeff=0.9351;MQ=56.83;MQ0=0;MQRankSum=-5.839;QD=27.71;ReadPosRankSum=7.309;VQSLOD=2.8480;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:10,33:43:90.94:1179,91,0	0/0:4,0:4:9.03:0,9,167	0/0:13,0:13:26.61:0,27,383	0/0:14,0:14:2.91:0,3,484	0/0:11,0:11:24.08:0,24,460	0/0:8,0:9:18.04:0,18,294	0/0:23,0:26:57.13:0,57,1028	0/0:15,0:17:31.35:0,31,551	1/1:2,15:17:42.04:551,42,0	1/1:4,18:22:53.87:707,54,0	1/1:2,13:15:20.89:254,21,0	1/1:3,19:22:54.09:709,54,0	1/1:0,25:25:69.21:906,69,0	0/0:14,0:15:36.03:0,36,621	0/0:17,0:20:33.07:0,33,548	1/1:3,12:15:30.04:394,30,0	0/0:19,0:20:36.03:0,36,609	1/1:4,22:26:54.13:709,54,0	1/1:5,14:17:38.91:495,39,0	1/1:1,15:16:28.02:337,28,0	1/1:5,56:61:99:1309,106,0	1/1:1,9:10:18.06:236,18,0	1/1:1,13:14:32.87:380,33,0	1/1:4,20:24:52.31:648,52,0	1/1:1,20:21:54.09:689,54,0	1/1:2,13:15:39.01:512,39,0	1/1:1,20:21:50.62:669,51,0	1/1:0,1:1:3.01:39,3,0
chr10	75182955	.	TAA	T	2096.89	PASS	AB=0.627;AC=28;AF=0.500;AN=56;BaseQRankSum=6.871;DP=515;FS=6.597;HRun=18;HaplotypeScore=87.1068;InbreedingCoeff=0.4858;MQ=52.43;MQ0=35;MQRankSum=2.264;QD=6.85;ReadPosRankSum=7.226;VQSLOD=-0.1870;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:33:12.17:91,0,12	0/0:10,0:9:27.04:0,27,302	0/0:24,0:8:19.90:0,20,151	0/0:19,1:10:8.15:0,8,58	0/0:31,0:32:46.55:0,47,412	0/0:21,0:22:37.18:0,37,369	0/0:15,0:14:13.99:0,14,158	0/0:28,0:21:34.69:0,35,283	1/1:4,0:10:12.42:51,12,0	0/1:6,0:15:14.03:69,0,14	0/1:6,0:18:2.97:67,0,3	1/1:2,0:12:24.11:103,24,0	0/1:3,0:9:3.29:41,0,3	0/0:9,0:10:17.23:0,17,146	0/0:17,0:18:38.42:0,38,420	1/1:5,0:16:4.87:71,5,0	0/0:23,0:21:35.33:0,35,297	0/1:9,0:12:6.19:40,0,6	1/1:9,10:19:32.33:234,32,0	1/1:5,21:25:53.38:401,53,0	1/1:4,8:10:20.88:156,21,0	0/1:5,0:10:7.81:32,0,8	0/1:5,0:14:14.05:56,0,14	1/1:2,0:16:26.10:113,26,0	1/1:2,0:12:21.39:90,21,0	1/1:9,14:20:34.93:266,35,0	1/1:1,15:16:32.80:246,33,0	0/1:11,11:16:5.58:171,0,6
chr10	75183405	.	C	CA	1204.33	PASS	AB=0.817;AC=23;AF=0.411;AN=56;BaseQRankSum=5.707;DP=543;FS=0.000;HRun=15;HaplotypeScore=82.2633;InbreedingCoeff=0.5437;MQ=72.58;MQ0=4;MQRankSum=-2.944;QD=4.94;ReadPosRankSum=-2.929;VQSLOD=1.3744;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,3:37:28.82:0,29,277	0/0:4,0:4:5.83:0,6,36	0/0:28,0:14:4.51:0,5,16	0/0:25,0:18:4.68:0,5,47	0/1:21,2:24:36.13:36,0,131	0/0:25,0:25:27.50:0,27,162	0/0:18,0:18:31.22:0,31,183	0/0:25,0:25:27.27:0,27,158	0/1:13,3:16:5.47:5,0,86	1/1:8,13:21:10.98:187,11,0	1/1:7,9:17:14.90:113,15,0	0/0:10,0:10:3.68:0,4,60	0/1:10,0:10:4.46:4,0,42	0/0:17,0:17:2.38:0,2,106	0/0:16,0:16:17.45:0,17,107	0/1:7,6:14:6.86:84,0,7	0/0:27,0:27:17.77:0,18,209	0/1:7,11:18:12.07:109,0,12	1/1:21,0:27:34.09:171,34,0	1/1:8,1:15:8.99:44,9,0	1/1:5,0:16:22.84:117,23,0	0/0:17,4:21:7.11:0,7,154	0/0:17,0:19:23.44:0,23,135	0/0:22,0:24:34.46:0,34,204	1/1:3,14:17:14.11:139,14,0	1/1:6,1:20:25.99:147,26,0	1/1:21,1:21:31.80:188,32,0	1/1:5,0:5:8.78:56,9,0
chr10	75183538	.	T	TC	11368.49	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=8.286;DP=499;FS=0.000;HRun=0;HaplotypeScore=78.2488;InbreedingCoeff=0.9952;MQ=80.48;MQ0=0;MQRankSum=-7.556;QD=37.77;ReadPosRankSum=4.035;VQSLOD=5.0113;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:60.12:847,60,0	0/0:9,0:9:27.09:0,27,376	0/0:16,0:16:48.06:0,48,580	0/0:18,0:18:48.16:0,48,660	0/0:17,0:17:48.15:0,48,655	0/0:20,0:20:57.18:0,57,781	0/0:18,0:18:54.13:0,54,702	0/0:40,0:40:99:0,120,1576	1/1:0,14:14:36.12:534,36,0	1/1:3,20:22:57.16:811,57,0	1/1:1,23:22:63.21:937,63,0	1/1:0,8:8:21.07:309,21,0	1/1:0,8:8:21.07:311,21,0	0/0:21,0:21:51.06:0,51,609	0/0:22,0:22:63.20:0,63,865	1/1:0,10:10:30.10:447,30,0	0/0:17,0:17:51.13:0,51,675	1/1:2,6:8:20.97:262,21,0	1/1:7,16:24:69.10:875,69,0	1/1:3,17:20:57.09:781,57,0	1/1:2,22:24:57.19:852,57,0	1/1:2,14:16:42.13:606,42,0	1/1:0,24:24:69.01:967,69,0	1/1:0,17:17:51.10:736,51,0	1/1:0,16:16:48.08:687,48,0	1/1:3,19:21:63.12:871,63,0	1/1:2,11:13:23.99:358,24,0	1/1:3,3:5:15.02:180,15,0
chr10	75183575	.	A	ATT	6752.88	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=7.766;DP=514;FS=3.853;HRun=12;HaplotypeScore=105.7040;InbreedingCoeff=0.9280;MQ=68.53;MQ0=0;MQRankSum=-5.509;QD=20.59;ReadPosRankSum=-2.697;VQSLOD=3.7613;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,9:26:47.59:612,48,0	0/0:11,0:11:24:0,24,222	0/1:15,0:11:4.35:4,0,68	0/0:20,0:23:33.71:0,34,214	0/0:21,0:21:44.82:0,45,401	0/0:17,0:17:38.77:0,39,361	0/0:15,0:16:31.90:0,32,288	0/0:34,0:35:62.64:0,63,563	1/1:3,7:10:24.08:332,24,0	1/1:13,2:24:42.08:443,42,0	1/1:13,2:19:33.05:346,33,0	1/1:2,3:5:15.03:189,15,0	1/1:6,2:9:14.98:162,15,0	0/0:22,0:22:48.01:0,48,443	0/0:19,0:20:28.28:0,28,300	1/1:4,0:9:19.23:166,19,0	0/0:19,0:20:44.86:0,45,458	1/1:1,1:7:12.02:115,12,0	1/1:12,11:25:38.10:480,38,0	1/1:7,16:25:59.51:707,60,0	1/1:10,4:14:30.10:416,30,0	1/1:6,9:16:29.91:373,30,0	1/1:14,14:30:59.67:775,60,0	1/1:8,6:16:19.28:197,19,0	1/1:10,0:19:28.29:261,28,0	1/1:9,16:26:54.13:700,54,0	1/1:8,4:13:18.02:216,18,0	1/1:1,7:8:20.56:260,21,0
chr10	75184383	.	AT	A	2413.05	PASS	AB=0.780;AC=12;AF=0.214;AN=56;BaseQRankSum=9.861;DP=564;FS=8.943;HRun=10;HaplotypeScore=58.2596;InbreedingCoeff=0.7562;MQ=61.88;MQ0=2;MQRankSum=0.962;QD=16.30;ReadPosRankSum=0.130;VQSLOD=3.5248;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.22:0,87,953	0/0:11,0:10:30.08:0,30,332	0/0:7,0:6:14.07:0,14,134	0/1:8,0:8:9.83:10,0,137	0/0:20,0:20:48.06:0,48,513	0/0:23,0:23:57.15:0,57,623	0/0:26,1:27:40:0,40,631	0/0:24,1:25:31.09:0,31,566	0/0:20,0:20:51.14:0,51,564	0/0:18,0:18:30.07:0,30,324	0/0:12,0:12:30.08:0,30,332	0/0:17,0:19:47.96:0,48,512	0/0:18,2:20:2.03:0,2,471	0/0:16,0:16:42.08:0,42,445	0/0:23,0:23:54.15:0,54,597	0/0:10,0:10:30.08:0,30,332	0/0:24,0:24:63.17:0,63,697	0/0:22,1:22:22.04:0,22,458	1/1:6,18:24:56.84:463,57,0	1/1:6,23:29:56.81:495,57,0	1/1:3,27:30:71.98:625,72,0	0/0:26,1:27:52.15:0,52,801	0/0:16,0:16:33.09:0,33,365	0/0:20,0:20:44.68:0,45,481	0/0:25,0:24:72.16:0,72,768	1/1:3,21:25:65.01:553,65,0	0/1:5,18:23:15.38:340,0,15	1/1:3,5:8:14.67:107,15,0
chr10	75184556	.	GA	G	2031.24	PASS	AB=0.941;AC=24;AF=0.429;AN=56;BaseQRankSum=7.782;DP=497;FS=5.612;HRun=13;HaplotypeScore=81.5687;InbreedingCoeff=0.7990;MQ=64.63;MQ0=3;MQRankSum=3.297;QD=8.68;ReadPosRankSum=3.410;VQSLOD=3.0936;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:14.57:171,15,0	0/0:8,0:8:18.02:0,18,169	0/0:26,0:10:8.40:0,8,65	0/0:18,0:12:4.85:0,5,55	0/0:21,0:22:40.23:0,40,481	0/0:9,0:10:29.88:0,30,277	0/0:21,2:23:24.30:0,24,479	0/0:10,0:10:23.92:0,24,210	1/1:13,0:13:19.30:81,19,0	1/1:4,14:18:27.76:243,28,0	1/1:1,16:17:44.25:323,44,0	1/1:22,0:23:17.12:202,17,0	1/1:15,0:15:11.04:68,11,0	0/0:13,1:14:8.13:0,8,235	0/0:15,0:14:33.02:0,33,302	1/1:0,12:13:31.87:225,32,0	0/0:23,0:22:60.04:0,60,564	1/1:2,17:19:44.72:328,45,0	0/0:17,0:18:25.15:0,25,285	0/1:25,4:30:24.73:25,0,396	0/0:9,1:11:7.94:0,8,211	1/1:17,0:18:15:121,15,0	0/1:13,0:13:10.25:54,0,10	1/1:12,0:12:28.72:160,29,0	1/1:3,14:18:34.84:247,35,0	0/0:17,1:18:18.13:0,18,345	0/0:31,2:33:63.05:0,63,591	0/0:13,0:13:27.03:0,27,257
chr10	75184577	.	T	TA	2980.22	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.965;DP=542;FS=3.527;HRun=3;HaplotypeScore=102.1892;InbreedingCoeff=0.9381;MQ=68.16;MQ0=3;MQRankSum=0.439;QD=23.84;ReadPosRankSum=-0.878;VQSLOD=2.7561;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:22,2:24:62.26:628,62,0	0/0:8,0:8:24.06:0,24,277	0/0:30,0:12:4.02:0,4,101	0/0:13,0:6:2.22:0,2,64	0/0:25,0:25:66.12:0,66,731	0/0:12,0:12:30.07:0,30,338	0/0:24,0:24:60.15:0,60,691	0/0:22,0:22:51.13:0,51,583	1/1:12,3:15:38.42:385,38,0	0/0:19,0:19:51.13:0,51,579	0/0:20,0:20:57.13:0,57,628	1/1:21,2:23:63.80:604,64,0	1/1:14,3:17:38.98:403,39,0	0/0:12,0:12:30.07:0,30,337	0/0:14,0:13:36.10:0,36,417	0/0:17,0:17:42.10:0,42,469	0/0:24,0:23:66.18:0,66,765	0/0:28,0:28:76.95:0,77,774	0/0:19,0:19:45.07:0,45,476	0/0:26,0:26:57.12:0,57,639	0/0:13,0:13:30.08:0,30,340	1/1:14,4:18:47.44:497,47,0	1/1:16,2:18:47.33:407,47,0	1/1:9,1:10:24.05:252,24,0	0/0:18,0:18:45.13:0,45,525	0/0:25,0:25:69.16:0,69,770	0/0:30,0:30:81.05:0,81,895	0/0:17,0:17:36.10:0,36,419
chr10	75184611	.	G	GA	6629.66	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=8.459;DP=525;FS=14.221;HRun=0;HaplotypeScore=95.9464;InbreedingCoeff=0.9837;MQ=72.08;MQ0=0;MQRankSum=-1.960;QD=27.28;ReadPosRankSum=3.408;VQSLOD=3.9489;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:69.13:771,69,0	0/0:11,0:11:33.08:0,33,441	0/0:13,0:13:29.70:0,30,297	0/0:7,0:7:5.93:0,6,141	0/0:26,0:26:72.24:0,72,1000	0/0:14,0:14:42.14:0,42,587	0/0:23,0:23:69.23:0,69,941	0/0:25,0:25:75.21:0,75,971	1/1:1,16:17:46.89:526,47,0	0/0:26,0:26:61.95:0,62,291	0/0:24,0:24:43.20:0,43,319	1/1:2,22:24:64.79:729,65,0	1/1:1,17:18:45.12:499,45,0	0/0:14,0:14:42.14:0,42,582	0/0:22,0:22:66.21:0,66,902	0/0:12,0:12:30.64:0,31,163	0/0:20,0:20:60.20:0,60,838	0/0:23,0:23:52.62:0,53,281	1/1:3,16:19:39.13:489,39,0	1/1:2,16:18:44.34:506,44,0	1/1:1,12:14:32.45:359,32,0	1/1:2,12:14:24.21:295,24,0	1/1:2,12:14:29.09:325,29,0	1/1:0,6:6:18.05:199,18,0	0/0:22,0:22:54.78:0,55,286	1/1:3,22:25:35.69:603,36,0	1/1:2,22:24:63.81:702,64,0	1/1:1,22:23:54.80:627,55,0
chr10	75186516	.	AAGCCTAACCGTG	A	8162.75	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.435;DP=511;FS=5.212;HRun=0;HaplotypeScore=179.3044;InbreedingCoeff=0.9922;MQ=94.11;MQ0=0;MQRankSum=-13.122;QD=68.02;ReadPosRankSum=4.365;VQSLOD=4.2068;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,19:25:36.12:1296,36,0	0/0:5,0:5:15.05:0,15,843	0/0:26,0:26:75.26:0,75,3734	0/0:29,0:29:80.47:0,80,4100	0/0:12,0:12:36.12:0,36,2018	0/0:19,0:19:51.18:0,51,2899	0/0:14,0:14:39.13:0,39,2236	0/0:29,0:29:81.27:0,81,3974	1/1:1,20:21:54.19:2031,54,0	0/0:11,0:11:27.09:0,27,1658	0/0:9,0:9:21.07:0,21,1215	1/1:2,16:18:33.11:1241,33,0	1/1:2,13:15:33.11:1238,33,0	0/0:13,0:13:39.13:0,39,2266	0/0:17,0:17:48.15:0,48,2774	0/0:21,0:21:60.20:0,60,3303	0/0:33,0:32:96.32:0,96,5558	0/0:22,0:22:63.22:0,63,3485	0/0:19,0:18:51.15:0,51,2833	0/0:16,0:16:45.15:0,45,2657	0/0:32,0:32:81.28:0,81,4679	1/1:3,11:14:27.09:1006,27,0	1/1:4,5:9:15.05:562,15,0	1/1:4,14:18:21.07:790,21,0	0/0:11,0:11:33.11:0,33,1964	0/0:15,0:15:45.15:0,45,2466	0/0:25,0:25:66.23:0,66,3852	0/0:13,0:13:39.13:0,39,2401
chr10	75188721	.	CA	C	1663.51	PASS	AB=0.940;AC=15;AF=0.268;AN=56;BaseQRankSum=10.027;DP=528;FS=2.016;HRun=11;HaplotypeScore=63.4342;InbreedingCoeff=0.7378;MQ=58.52;MQ0=11;MQRankSum=-0.408;QD=10.87;ReadPosRankSum=0.672;VQSLOD=3.0702;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,2:36:34.76:0,35,765	0/0:4,0:4:12.03:0,12,128	0/0:8,0:7:14.62:0,15,113	0/1:9,0:7:6.03:12,0,6	0/0:22,1:22:47.71:0,48,448	0/0:30,0:31:71.85:0,72,732	0/0:19,1:20:53.98:0,54,540	0/1:21,2:23:1.20:1,0,387	0/0:16,1:17:17.39:0,17,358	0/0:28,1:29:50.52:0,51,724	0/1:7,1:7:6.75:7,0,124	0/0:13,0:13:29.94:0,30,303	0/0:14,1:14:2.44:0,2,231	0/0:10,0:11:23.81:0,24,214	0/0:15,0:14:36.01:0,36,359	0/0:19,0:19:48.11:0,48,503	0/0:36,1:36:65.30:0,65,872	0/0:16,0:16:39.10:0,39,416	1/1:7,8:13:23.95:197,24,0	1/1:5,17:21:41.92:345,42,0	1/1:3,12:15:34.99:277,35,0	0/0:17,0:16:36.09:0,36,384	0/0:15,0:15:38.89:0,39,396	0/0:31,0:30:45.03:0,45,620	0/0:11,0:10:18.04:0,18,190	1/1:3,17:23:57.05:436,57,0	1/1:5,22:28:64.96:523,65,0	1/1:3,5:6:5.99:49,6,0
chr10	75189105	.	AAAAAAAAAAG	A	830.39	PASS	AB=0.790;AC=10;AF=0.179;AN=56;BaseQRankSum=3.921;DP=380;FS=15.183;HRun=0;HaplotypeScore=108.7071;InbreedingCoeff=0.6504;MQ=51.67;MQ0=29;MQRankSum=1.180;QD=10.78;ReadPosRankSum=-1.239;VQSLOD=0.5529;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:20:33.73:0,34,1519	0/0:6,0:6:18.02:0,18,495	0/0:14,0:4:5.29:0,5,282	0/0:18,0:10:22.65:0,23,319	0/0:18,0:18:40.41:0,40,853	0/0:12,0:12:33.06:0,33,839	0/0:19,0:17:38.61:0,39,1004	0/0:19,0:17:45.17:0,45,836	0/0:9,0:9:27.08:0,27,805	0/0:18,0:16:45.15:0,45,1428	0/0:8,0:8:20.21:0,20,507	0/0:7,0:7:16.61:0,17,409	0/0:8,0:8:11.72:0,12,508	0/0:9,0:9:21.07:0,21,489	0/0:8,0:7:17.99:0,18,392	0/0:12,0:12:33.10:0,33,1021	0/0:23,0:20:24.83:0,25,848	0/0:13,0:13:24.08:0,24,749	1/1:12,2:12:19.61:335,20,0	0/1:5,13:17:11.08:181,0,11	1/1:8,0:5:2.65:45,3,0	0/0:13,0:13:25.33:0,25,721	0/0:18,0:16:39.88:0,40,858	0/0:12,0:11:6.91:0,7,243	0/0:16,0:14:21.49:0,21,1163	1/1:10,9:15:22:314,22,0	1/1:8,0:8:11.50:90,12,0	0/1:10,0:7:22.21:22,0,42
chr10	75189129	.	T	TACAC	594.18	PASS	AB=0.849;AC=15;AF=0.300;AN=50;BaseQRankSum=0.135;DP=325;FS=2.312;HRun=0;HaplotypeScore=110.4577;InbreedingCoeff=0.2408;MQ=59.20;MQ0=12;MQRankSum=-0.426;QD=4.10;ReadPosRankSum=0.264;VQSLOD=1.7591;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:18:18.06:0,18,258	0/0:5,0:5:8.99:0,9,94	./.	0/1:30,0:14:0:0,0,0	0/0:8,0:8:12.04:0,12,152	0/0:6,0:6:6.02:0,6,90	0/0:12,0:10:15.05:0,15,200	0/0:12,0:12:0.83:0,1,18	0/1:8,0:13:1.54:90,0,2	0/0:4,0:7:11.99:0,12,121	./.	1/1:2,1:3:3.01:71,3,0	1/1:9,0:10:6.20:137,6,0	0/0:7,0:7:8.74:0,9,120	0/0:12,0:14:18.51:0,19,232	0/0:3,0:3:2.94:0,3,18	0/1:12,0:25:31.63:32,0,44	0/1:7,0:8:9.99:10,0,38	0/0:15,0:16:6.01:0,6,61	./.	0/0:10,0:8:3.48:0,3,48	1/1:13,0:13:14.19:204,14,0	0/1:15,0:15:30.34:164,0,30	0/1:2,6:12:0:0,0,0	1/1:8,0:9:2.88:15,3,0	0/0:13,0:15:1.19:0,1,107	0/1:5,0:5:7.34:7,0,11	0/0:3,0:2:3.01:0,3,37
chr10	75189339	.	GC	G	3876.24	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.953;DP=633;FS=8.055;HRun=2;HaplotypeScore=64.6154;InbreedingCoeff=0.9632;MQ=88.70;MQ0=0;MQRankSum=-2.747;QD=33.71;ReadPosRankSum=0.738;VQSLOD=3.5889;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1843	0/0:3,0:3:9.03:0,9,135	0/0:27,0:27:63.14:0,63,971	0/0:23,0:23:65.97:0,66,893	0/0:19,0:19:57.19:0,57,852	0/0:25,0:25:75.25:0,75,1124	0/0:26,0:26:78.25:0,78,1147	0/0:34,0:34:99:0,99,1465	0/0:27,0:27:75.24:0,75,1095	0/0:27,0:26:78.26:0,78,1163	0/0:18,0:18:54.17:0,54,779	0/0:15,0:15:45.15:0,45,674	0/0:23,0:23:60.19:0,60,877	0/0:19,0:19:57.19:0,57,853	0/0:37,0:37:99:0,105,1512	0/0:19,0:19:57.19:0,57,853	0/0:33,0:33:99:0,99,1462	0/0:24,0:24:69.23:0,69,1032	1/1:0,19:19:57.19:739,57,0	1/1:0,11:11:24.08:303,24,0	1/1:1,39:40:99:1325,102,0	0/0:13,0:13:33.11:0,33,495	0/0:6,0:6:15.04:0,15,202	0/0:40,0:40:99:0,117,1753	0/0:18,0:18:54.17:0,54,789	1/1:0,26:25:69.22:893,69,0	1/1:0,17:17:42.14:539,42,0	1/1:0,2:2:6.02:78,6,0
chr10	75189562	.	C	CG	4745.54	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-10.706;DP=619;FS=3.280;HRun=5;HaplotypeScore=63.3399;InbreedingCoeff=0.9884;MQ=73.29;MQ0=0;MQRankSum=-2.353;QD=33.19;ReadPosRankSum=-0.683;VQSLOD=5.1634;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,126,1354	0/0:4,0:4:12.03:0,12,129	0/0:11,0:11:24.03:0,24,242	0/0:12,0:12:32.02:0,32,336	0/0:25,0:25:62.68:0,63,677	0/0:15,0:15:39.10:0,39,419	0/0:24,0:24:69.15:0,69,733	0/0:26,0:26:57.09:0,57,600	0/0:19,0:19:51.13:0,51,548	0/0:18,0:18:48.12:0,48,516	0/0:7,0:7:15.04:0,15,161	0/0:21,0:21:63.16:0,63,676	0/0:18,0:18:48.12:0,48,516	0/0:19,0:19:48.02:0,48,481	0/0:27,0:27:72.15:0,72,757	0/0:25,0:25:69.12:0,69,716	0/0:40,0:40:99:0,105,1115	0/0:17,0:17:48.12:0,48,515	1/1:1,13:14:39.13:513,39,0	1/1:1,25:26:69.21:890,69,0	1/1:4,36:40:96.31:1259,96,0	0/0:22,0:22:54.13:0,54,580	0/0:21,0:21:54.13:0,54,580	0/0:39,0:39:99:0,114,1224	0/0:19,0:18:48.12:0,48,515	1/1:4,23:27:36.95:821,37,0	1/1:1,28:29:78.25:1026,78,0	1/1:0,7:7:18.06:237,18,0
chr10	75189798	.	CAG	C	2559.82	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.959;DP=530;FS=2.236;HRun=0;HaplotypeScore=69.3490;InbreedingCoeff=0.9909;MQ=82.35;MQ0=1;MQRankSum=-1.708;QD=28.44;ReadPosRankSum=-2.042;VQSLOD=4.4104;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.21:0,60,1030	0/0:9,0:9:27.09:0,27,460	0/0:22,0:22:48.10:0,48,674	0/0:13,0:12:18.82:0,19,448	0/0:12,0:12:33.10:0,33,544	0/0:8,0:8:24.08:0,24,416	0/0:26,0:26:66.20:0,66,1106	0/0:19,0:19:45.15:0,45,779	0/0:20,0:20:57.20:0,57,987	0/0:20,0:20:51.16:0,51,853	0/0:15,0:15:36.12:0,36,624	0/0:24,0:24:69.24:0,69,1195	0/0:23,0:23:69.24:0,69,1194	0/0:22,0:22:63.22:0,63,1090	0/0:22,0:22:51.16:0,51,856	0/0:30,0:30:81.28:0,81,1391	0/0:37,0:37:99:0,102,1752	0/0:32,0:32:81.28:0,81,1402	1/1:2,13:15:39.10:489,39,0	1/1:0,8:8:24.08:320,24,0	1/1:2,24:26:56.72:758,57,0	0/0:10,0:10:27.09:0,27,468	0/0:12,0:12:33.11:0,33,571	0/0:24,0:24:63.19:0,63,1062	0/0:17,0:17:51.17:0,51,882	1/1:2,10:12:30.08:380,30,0	1/1:3,20:23:47.99:639,48,0	1/1:1,5:6:12.04:160,12,0
chr10	75194608	.	GAGA	G	5126.44	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.003;DP=683;FS=7.651;HRun=0;HaplotypeScore=102.9676;InbreedingCoeff=0.9943;MQ=84.45;MQ0=1;MQRankSum=-4.322;QD=39.74;ReadPosRankSum=2.464;VQSLOD=5.7773;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,105,2220	0/0:13,0:13:39.13:0,39,824	0/0:34,0:33:78.27:0,78,1569	0/0:34,1:32:13.17:0,13,1031	0/0:29,0:29:87.30:0,87,1854	0/0:19,0:19:54.18:0,54,1169	0/0:32,0:32:90.27:0,90,1887	0/0:31,0:31:78.27:0,78,1588	0/0:26,0:26:69.24:0,69,1478	0/0:21,0:21:57.19:0,57,1174	0/0:17,0:17:42.13:0,42,854	0/0:27,0:27:72.23:0,72,1492	0/0:21,0:21:51.17:0,51,1074	0/0:26,0:26:75.26:0,75,1588	0/0:31,0:31:84.29:0,84,1780	0/0:28,0:28:66.23:0,66,1415	0/0:20,0:20:51.17:0,51,1070	0/0:17,0:17:45.13:0,45,928	1/1:2,15:17:45.11:677,45,0	1/1:1,12:13:36.12:562,36,0	1/1:2,29:31:78.27:1220,78,0	0/0:17,0:17:48.16:0,48,1038	0/0:19,0:19:48.15:0,48,962	0/0:30,0:30:87.30:0,87,1844	0/0:22,0:22:57.20:0,57,1231	1/1:4,21:25:21.29:941,21,0	1/1:2,22:24:60.20:939,60,0	1/1:0,19:19:51.17:788,51,0
chr10	75196325	.	CCTCT	C	338.53	PASS	AB=0.930;AC=19;AF=0.396;AN=48;BaseQRankSum=3.060;DP=615;FS=6.967;HRun=0;HaplotypeScore=96.4667;InbreedingCoeff=0.3073;MQ=55.77;MQ0=34;MQRankSum=-1.878;QD=1.57;ReadPosRankSum=1.115;VQSLOD=1.1795;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:14.89:0,15,237	0/0:11,0:10:2.90:0,3,16	./.	0/0:78,0:24:2.50:0,2,9	0/0:19,0:19:11.90:0,12,230	0/1:14,0:13:1.87:2,0,38	0/0:19,0:23:3.68:0,4,153	0/0:29,0:28:0:0,0,0	1/1:20,0:23:2.95:28,3,0	1/1:21,0:21:3.41:19,3,0	1/1:13,0:15:3:28,3,0	1/1:15,1:16:2.75:45,3,0	0/1:17,0:18:7.17:17,0,7	0/0:24,0:23:21.04:0,21,337	0/1:13,1:14:37.26:37,0,88	0/1:18,0:22:0.42:11,0,0	0/0:17,0:16:21.04:0,21,279	1/1:13,0:19:2.95:27,3,0	0/0:22,0:22:5.99:0,6,86	0/0:8,0:8:3.48:0,3,51	0/0:27,0:29:14.77:0,15,242	./.	1/1:11,3:14:2.51:46,3,0	1/1:16,9:25:12.51:186,13,0	./.	0/0:15,0:15:9.03:0,9,169	0/1:11,1:12:34.27:34,0,133	./.
chr10	75196502	.	GCTC	G	2175.10	PASS	AB=1.000;AC=24;AF=0.444;AN=54;BaseQRankSum=6.453;DP=505;FS=5.250;HRun=0;HaplotypeScore=82.4703;InbreedingCoeff=0.7483;MQ=62.70;MQ0=9;MQRankSum=-3.001;QD=9.84;ReadPosRankSum=0.444;VQSLOD=2.4906;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:48.16:0,48,934	0/0:11,0:11:23.87:0,24,415	0/0:18,0:9:2.97:0,3,10	./.	0/0:18,0:18:18.04:0,18,319	0/0:21,0:21:24.51:0,25,401	0/0:23,0:23:35.16:0,35,629	0/1:24,0:24:31.91:32,0,67	1/1:13,10:22:18.06:246,18,0	1/1:6,0:22:41.65:293,42,0	1/1:1,0:4:3.35:16,3,0	1/1:7,11:18:27.09:369,27,0	1/1:8,11:17:12.02:164,12,0	0/0:19,0:19:45.14:0,45,840	0/0:19,0:19:30.08:0,30,517	1/1:6,0:20:14.88:105,15,0	0/0:24,0:24:51.16:0,51,968	1/1:8,0:16:11.90:84,12,0	0/0:23,0:23:8.95:0,9,80	0/0:12,0:12:5.96:0,6,52	0/0:30,0:27:11.78:0,12,97	1/1:10,7:17:15.05:204,15,0	1/1:8,7:14:12.04:164,12,0	1/1:3,19:22:45.15:616,45,0	1/1:3,0:12:11.73:73,12,0	0/0:16,0:19:27.02:0,27,329	0/1:8,0:8:11.23:14,0,11	0/0:11,0:11:8.92:0,9,76
chr10	75196521	.	C	CTCT	1522.32	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=2.787;DP=480;FS=4.995;HRun=0;HaplotypeScore=90.4463;InbreedingCoeff=0.9318;MQ=52.64;MQ0=21;MQRankSum=-2.653;QD=14.78;ReadPosRankSum=-2.494;VQSLOD=2.6615;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:63.08:0,63,905	0/0:12,0:12:32.39:0,32,419	0/0:11,0:3:8.40:0,8,66	0/0:3,0:1:2.99:0,3,23	0/0:11,0:11:27.05:0,27,377	0/0:14,0:14:30.53:0,31,430	0/0:23,0:21:49.02:0,49,766	0/0:16,0:14:32.93:0,33,301	0/0:22,0:20:35.95:0,36,311	0/0:23,0:22:62.37:0,62,508	0/0:4,0:4:8.82:0,9,58	0/0:16,0:16:35.98:0,36,318	0/0:24,0:22:41.73:0,42,347	0/0:21,0:20:59.89:0,60,846	0/0:18,0:17:48.08:0,48,633	0/0:22,0:22:29.84:0,30,234	0/0:24,0:24:69.12:0,69,988	0/0:20,0:19:41.86:0,42,331	1/1:23,0:22:27.52:400,28,0	1/1:0,8:8:14.93:169,15,0	1/1:38,0:33:24.95:322,25,0	0/0:16,0:15:29.90:0,30,249	0/0:13,0:12:20.85:0,21,172	0/0:24,0:23:57:0,57,513	0/0:13,0:13:23.91:0,24,192	1/1:15,1:15:34.50:398,34,0	1/1:11,0:11:27.62:227,28,0	1/1:7,0:7:15:191,15,0
chr10	75196796	.	AT	A	786.92	PASS	AB=0.798;AC=27;AF=0.482;AN=56;BaseQRankSum=3.050;DP=467;FS=5.495;HRun=16;HaplotypeScore=72.6443;InbreedingCoeff=0.1919;MQ=66.27;MQ0=13;MQRankSum=-1.383;QD=2.44;ReadPosRankSum=3.122;VQSLOD=-0.6020;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,4:34:32.62:33,0,250	0/1:5,3:8:35.84:36,0,52	0/0:8,0:5:2.98:0,3,22	0/0:13,0:8:0:0,0,0	0/0:23,1:24:8.66:0,9,263	0/1:10,4:15:38.46:38,0,137	0/0:18,1:19:13.18:0,13,228	0/0:20,1:22:8.69:0,9,159	0/1:11,2:13:24.09:24,0,30	1/1:11,1:19:21.10:68,21,0	1/1:13,1:20:14.16:51,14,0	0/1:5,2:8:33.54:43,0,34	0/0:10,0:10:19.08:0,19,136	0/1:11,1:11:0.10:0,0,96	0/1:20,1:19:3.15:3,0,178	1/1:8,0:15:26.07:76,26,0	0/1:41,1:42:13.30:13,0,304	1/1:7,0:14:11.46:34,11,0	1/1:10,6:17:13.24:117,13,0	0/1:5,10:17:4.04:73,0,4	0/1:10,6:15:26.89:43,0,27	0/0:16,2:19:9.26:0,9,169	0/0:15,0:14:18.76:0,19,138	0/0:14,0:14:14.67:0,15,104	1/1:5,0:12:18.28:54,18,0	0/1:5,9:15:7.13:127,0,7	1/1:7,4:14:21.53:114,22,0	1/1:2,2:4:2.94:18,3,0
chr10	75196817	.	CT	C	1784.09	PASS	AB=0.583;AC=23;AF=0.442;AN=52;BaseQRankSum=2.884;DP=466;FS=41.424;HRun=10;HaplotypeScore=65.6619;InbreedingCoeff=0.8442;MQ=45.12;MQ0=37;MQRankSum=-5.558;QD=9.06;ReadPosRankSum=4.284;VQSLOD=-0.3857;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,25:37:18.56:337,19,0	0/0:9,0:9:18.04:0,18,191	./.	./.	0/0:23,0:25:38.99:0,39,392	0/0:16,0:16:26.51:0,27,253	0/0:21,0:20:29.80:0,30,256	0/0:16,0:16:36.09:0,36,386	1/1:4,7:9:17.96:156,18,0	1/1:10,9:19:31.95:259,32,0	1/1:9,6:12:8.93:78,9,0	1/1:8,3:9:8.91:78,9,0	0/1:2,5:7:14.89:112,0,15	0/0:11,1:11:1.02:0,1,224	0/0:21,1:17:13.03:0,13,342	1/1:7,10:15:23.97:208,24,0	0/0:41,0:38:66.10:0,66,678	1/1:7,6:10:17.94:155,18,0	0/0:18,0:16:27.47:0,27,266	0/0:17,0:17:27.01:0,27,269	0/0:17,1:14:15:0,15,151	1/1:8,8:16:14.93:130,15,0	1/1:10,9:18:23.69:197,24,0	1/1:5,5:10:11.96:104,12,0	1/1:6,9:15:20.91:175,21,0	0/0:18,0:17:30.50:0,30,311	0/0:24,0:23:46.10:0,46,459	0/0:5,0:4:9.01:0,9,92
chr10	75197384	.	A	AG	661.02	PASS	AB=0.921;AC=14;AF=0.250;AN=56;BaseQRankSum=-2.313;DP=350;FS=4.078;HRun=8;HaplotypeScore=78.6392;InbreedingCoeff=0.6775;MQ=60.34;MQ0=13;MQRankSum=1.539;QD=7.18;ReadPosRankSum=-3.181;VQSLOD=0.7730;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,5:14:15.01:170,15,0	0/0:3,0:4:9.01:0,9,85	0/0:24,0:9:20.83:0,21,173	0/0:24,0:9:14.89:0,15,120	0/1:10,0:10:13.31:13,0,138	0/0:17,0:17:29.98:0,30,267	0/0:22,0:22:47.97:0,48,432	0/0:15,0:15:27:0,27,247	1/1:6,4:9:7.74:74,8,0	0/0:9,0:9:8.98:0,9,79	0/0:14,0:14:24:0,24,215	1/1:6,1:7:6:52,6,0	1/1:5,4:7:11.88:138,12,0	0/0:4,0:5:7.82:0,8,60	0/0:12,0:12:30:0,30,270	0/0:11,0:11:20.81:0,21,191	0/0:15,0:15:28.97:0,29,237	0/0:10,0:10:15:0,15,132	0/0:4,0:4:8.74:0,9,53	0/0:7,0:7:11.21:0,11,74	0/0:20,0:20:11.03:0,11,74	1/1:8,5:11:11.99:124,12,0	1/1:8,3:10:13.28:140,13,0	0/1:12,3:14:10.61:127,0,11	0/0:4,0:4:2.90:0,3,27	0/0:18,0:19:33.83:0,34,221	0/0:12,0:11:31.25:0,31,183	0/0:10,0:10:26.44:0,26,196
chr10	75197435	.	AAGAG	A	687.93	PASS	AB=0.994;AC=25;AF=0.446;AN=56;BaseQRankSum=5.286;DP=442;FS=25.818;HRun=0;HaplotypeScore=109.5438;InbreedingCoeff=0.2531;MQ=38.74;MQ0=35;MQRankSum=-5.595;QD=2.59;ReadPosRankSum=3.230;VQSLOD=0.4068;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,1:9:1.41:19,1,0	0/0:5,0:5:6.02:0,6,103	0/0:19,0:3:6.02:0,6,124	0/0:33,0:4:2.90:0,3,16	0/0:24,0:23:24.22:0,24,441	0/0:16,0:15:8.86:0,9,149	0/1:20,0:17:8.08:8,0,398	0/0:27,0:22:20.05:0,20,279	0/1:13,1:13:10.42:88,0,10	0/1:34,0:34:19.24:84,0,19	0/1:10,0:10:0:0,0,0	1/1:6,0:5:3:27,3,0	1/1:2,7:9:6.02:97,6,0	0/0:10,0:10:21.07:0,21,462	0/0:16,0:15:26.88:0,27,526	0/0:5,0:5:3.47:0,3,28	0/0:21,0:21:25.98:0,26,525	0/1:9,0:9:1.83:2,0,21	0/1:8,0:7:3.42:3,0,25	0/1:18,0:18:14.46:16,0,14	0/1:19,0:24:0.40:0,0,1	1/1:12,0:10:8.57:146,9,0	1/1:7,1:8:14.51:210,15,0	1/1:10,1:9:2.73:48,3,0	0/1:11,0:11:0:0,0,0	0/1:22,0:19:13.13:13,0,73	1/1:19,0:18:19.05:82,19,0	0/1:17,0:13:0.41:0,0,53
chr10	75197444	.	AG	A	1925.57	PASS	AB=0.772;AC=14;AF=0.250;AN=56;BaseQRankSum=5.906;DP=498;FS=27.525;HRun=1;HaplotypeScore=94.3013;InbreedingCoeff=0.0315;MQ=45.70;MQ0=41;MQRankSum=-7.344;QD=10.08;ReadPosRankSum=2.996;VQSLOD=0.0937;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:24.49:0,24,268	0/0:6,0:6:12.04:0,12,172	0/0:28,0:6:11.97:0,12,171	0/0:43,0:7:9.51:0,10,99	0/0:31,0:30:53.25:0,53,707	0/0:18,0:17:29.12:0,29,367	0/0:20,0:17:45.09:0,45,582	0/0:34,0:29:75.60:0,76,952	0/0:13,0:12:13.45:0,13,155	0/1:13,20:32:99:696,0,285	1/1:3,7:9:11.40:70,11,0	0/1:9,0:8:7:7,0,64	0/0:12,0:12:9.95:0,10,102	0/0:9,0:9:24.06:0,24,357	0/0:19,0:19:50.16:0,50,673	0/1:3,4:7:1.42:71,0,1	0/0:22,0:22:49.31:0,49,685	0/1:7,3:9:26.52:126,0,27	0/1:9,3:9:17.90:145,0,18	0/1:9,8:16:22.66:134,0,23	0/1:18,3:20:26.66:39,0,27	0/0:17,0:15:15.90:0,16,131	0/0:11,0:11:14.64:0,15,131	0/0:10,0:9:13.38:0,13,155	1/1:8,5:11:2.39:9,2,0	0/1:13,10:19:99:315,0,160	0/1:13,9:21:99:404,0,106	0/1:13,1:10:66.31:66,0,200
chr10	75197445	.	G	GA	2200.48	PASS	AB=0.874;AC=14;AF=0.250;AN=56;BaseQRankSum=4.744;DP=508;FS=25.706;HRun=1;HaplotypeScore=98.4339;InbreedingCoeff=0.1281;MQ=48.46;MQ0=40;MQRankSum=-7.098;QD=11.83;ReadPosRankSum=2.695;VQSLOD=0.7890;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:23.91:0,24,293	0/0:6,0:6:12.04:0,12,155	0/0:29,0:7:12.01:0,12,154	0/0:45,0:9:10.19:0,10,114	0/0:31,0:30:54.06:0,54,647	0/0:18,0:17:29.69:0,30,360	0/0:18,0:16:42.11:0,42,515	0/0:34,0:29:77.53:0,78,919	0/0:14,0:13:17.47:0,17,179	0/1:32,2:33:99:752,0,288	1/1:9,1:9:11.40:70,11,0	0/0:10,0:9:4.41:0,4,71	0/0:12,0:12:14.65:0,15,127	0/0:9,0:9:24.06:0,24,297	0/0:19,0:19:47.87:0,48,582	1/1:8,0:8:7.22:83,7,0	0/0:23,0:23:49.37:0,49,635	0/1:7,3:9:52.06:146,0,52	0/1:6,6:9:17.12:204,0,17	0/1:15,1:16:25.74:170,0,26	0/1:19,3:22:26.77:38,0,27	0/0:17,0:15:22.98:0,23,193	0/0:11,0:11:22.98:0,23,198	0/0:10,0:9:15.72:0,16,164	1/1:11,2:11:2.49:9,2,0	0/1:22,1:19:99:341,0,176	0/1:22,0:21:88.46:407,0,88	0/1:11,3:10:99:140,0,184
chr10	75198795	.	CTTTTCTTT	C	1357.13	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-3.073;DP=504;FS=6.468;HRun=0;HaplotypeScore=133.4384;InbreedingCoeff=0.9044;MQ=62.81;MQ0=14;MQRankSum=0.410;QD=17.86;ReadPosRankSum=1.521;VQSLOD=2.4102;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:53.97:0,54,1181	0/0:14,0:14:32.89:0,33,745	0/0:43,0:15:21.27:0,21,509	0/0:52,0:19:42.76:0,43,515	0/0:16,0:16:38.62:0,39,721	0/0:10,0:10:27.08:0,27,628	0/0:21,0:20:48:0,48,934	0/0:22,0:21:46.95:0,47,908	0/0:16,0:16:42.07:0,42,823	0/0:26,0:26:50.92:0,51,705	0/0:18,0:18:38.80:0,39,841	0/0:21,0:22:63.13:0,63,1315	0/0:12,0:14:33.34:0,33,667	0/0:14,0:14:39.07:0,39,838	0/0:10,0:10:21.02:0,21,329	0/0:14,0:14:6.93:0,7,164	0/0:18,0:18:35.80:0,36,943	0/0:15,0:15:11.96:0,12,414	1/1:14,1:14:16.14:230,16,0	1/1:8,1:10:6.48:235,6,0	1/1:4,1:5:5.56:43,6,0	0/0:11,0:11:30.04:0,30,550	0/0:12,0:12:30:0,30,558	0/0:18,0:18:30.15:0,30,766	0/0:18,0:18:23.23:0,23,358	1/1:20,2:21:34.44:416,34,0	1/1:21,0:20:44.30:500,44,0	1/1:2,0:3:6.02:104,6,0
chr10	75198802	.	T	TTTC	882.31	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=2.355;DP=521;FS=28.673;HRun=0;HaplotypeScore=115.9995;InbreedingCoeff=0.2154;MQ=56.73;MQ0=23;MQRankSum=-3.510;QD=3.75;ReadPosRankSum=2.367;VQSLOD=0.8145;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:21:32.26:64,0,32	0/0:15,0:15:24.88:0,25,214	0/0:42,0:14:28.36:0,28,196	0/0:50,0:17:20.10:0,20,258	0/0:16,0:15:32.77:0,33,237	0/0:13,0:13:25.08:0,25,194	0/0:21,0:20:32.09:0,32,370	0/0:21,0:20:37.78:0,38,257	1/1:17,0:17:1.70:68,2,0	0/1:23,0:23:0.91:221,0,1	1/1:10,11:22:19.60:282,20,0	0/1:21,0:20:29.51:30,0,40	0/1:14,0:14:25.08:30,0,25	0/0:15,0:15:21.67:0,22,220	0/0:9,0:9:13.82:0,14,121	0/1:17,0:17:0.96:68,0,1	0/0:22,0:21:22.68:0,23,327	1/1:4,10:15:12.87:132,13,0	0/1:16,0:15:4.27:4,0,92	0/1:14,0:12:3.32:3,0,63	1/1:5,0:4:2.18:9,2,0	0/0:12,0:11:3.39:0,3,65	0/1:12,0:11:31.55:32,0,35	0/1:17,0:17:6.16:88,0,6	0/1:19,0:19:15.64:16,0,36	0/0:21,0:19:29.47:0,29,268	0/0:23,0:21:42.94:0,43,283	0/0:6,0:5:9.80:0,10,65
chr10	75198803	.	T	TC	1188.12	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=3.126;DP=516;FS=2.174;HRun=0;HaplotypeScore=93.9666;InbreedingCoeff=0.7299;MQ=55.30;MQ0=23;MQRankSum=-3.171;QD=9.90;ReadPosRankSum=5.331;VQSLOD=3.5723;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,8:21:21.67:296,22,0	0/0:15,0:15:27.82:0,28,223	0/0:41,0:13:36.58:0,37,329	0/0:50,0:17:28.69:0,29,287	0/0:16,0:15:40.94:0,41,334	0/0:12,0:12:26.75:0,27,219	0/0:19,0:18:43.53:0,44,364	0/0:20,0:19:51.45:0,51,375	1/1:11,6:17:12.36:232,12,0	0/0:9,0:23:44.42:0,44,255	0/0:18,0:20:29.96:0,30,181	1/1:14,6:19:27.16:303,27,0	0/1:14,0:14:9.93:95,0,10	0/0:15,0:15:37.94:0,38,318	0/0:9,0:9:14.69:0,15,121	0/0:9,0:17:16.61:0,17,104	0/0:24,0:23:36.12:0,36,327	0/0:14,0:14:8.16:0,8,39	0/0:17,0:16:33.42:0,33,252	0/0:14,0:12:7.25:0,7,136	0/1:5,0:4:14.28:19,0,14	1/1:9,2:10:3.40:146,3,0	1/1:7,5:11:6.90:130,7,0	1/1:11,6:17:21.48:146,21,0	0/0:19,0:19:25.51:0,26,145	0/0:20,0:18:43.18:0,43,316	0/0:25,0:23:39.23:0,39,361	0/0:6,0:5:11.57:0,12,70
chr10	75198804	.	T	TC	224.47	PASS	AB=0.958;AC=6;AF=0.107;AN=56;BaseQRankSum=0.263;DP=522;FS=1.390;HRun=0;HaplotypeScore=99.8834;InbreedingCoeff=0.1168;MQ=52.55;MQ0=24;MQRankSum=1.012;QD=2.84;ReadPosRankSum=1.109;VQSLOD=3.2550;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:22:27.18:0,27,187	0/0:15,0:15:27.52:0,28,226	0/0:39,0:11:27.53:0,28,219	0/0:50,0:17:31.46:0,31,283	0/0:16,0:15:37.84:0,38,309	0/0:12,0:12:26.85:0,27,224	0/0:19,0:18:41.12:0,41,350	0/0:20,0:19:51.50:0,52,375	0/0:17,0:17:34.85:0,35,177	0/1:21,1:22:99:142,0,108	0/1:20,0:20:76.10:113,0,76	0/0:20,0:19:41.67:0,42,227	0/0:17,0:17:23.70:0,24,137	0/0:14,0:14:35.89:0,36,308	0/0:9,0:9:17.71:0,18,142	0/0:16,0:16:5.20:0,5,103	0/0:24,0:23:36.25:0,36,334	0/1:12,2:14:8.91:65,0,9	0/1:18,0:17:8.13:8,0,169	0/0:13,1:12:0.37:0,0,117	1/1:5,0:4:2.05:8,2,0	0/0:11,0:10:25.34:0,25,129	0/0:12,0:11:25.75:0,26,123	0/0:17,0:17:27.89:0,28,130	0/0:13,7:20:34.64:0,35,205	0/0:20,0:18:16.35:0,16,274	0/0:27,0:25:45.04:0,45,373	0/0:8,0:7:12.81:0,13,72
chr10	75198805	.	T	TTC	447.14	PASS	AB=0.822;AC=9;AF=0.161;AN=56;BaseQRankSum=6.801;DP=525;FS=3.344;HRun=0;HaplotypeScore=108.9262;InbreedingCoeff=0.3607;MQ=51.11;MQ0=24;MQRankSum=-2.092;QD=3.67;ReadPosRankSum=3.535;VQSLOD=2.3378;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,5:23:2.75:159,3,0	0/0:15,0:15:33.28:0,33,264	0/0:39,0:11:25.62:0,26,230	0/0:49,0:16:27.69:0,28,257	0/0:16,0:15:37.80:0,38,300	0/0:12,0:12:25.51:0,26,214	0/0:18,0:17:41.80:0,42,392	0/0:20,0:19:49.27:0,49,379	0/1:11,6:17:7.13:114,0,7	0/0:23,0:23:39.62:0,40,257	0/0:20,0:20:37.97:0,38,240	1/1:19,2:20:11.47:127,11,0	0/1:16,0:17:25.16:38,0,25	0/0:13,0:13:30.71:0,31,262	0/0:9,0:9:16.78:0,17,129	0/0:16,0:16:20.24:0,20,123	0/0:24,0:23:30.72:0,31,358	0/0:16,0:15:11.59:0,12,84	0/0:18,0:17:38.84:0,39,247	0/0:14,0:12:22.08:0,22,138	0/0:5,0:4:1.82:0,2,5	0/1:10,1:10:31.29:36,0,31	0/1:9,2:11:37.45:37,0,43	0/1:10,5:17:0.51:76,0,1	0/0:20,0:20:24.88:0,25,165	0/0:20,0:18:41.72:0,42,315	0/0:27,0:25:35.03:0,35,287	0/0:9,0:8:13.88:0,14,84
chr10	75198824	.	CT	C	1790.44	PASS	AB=0.660;AC=22;AF=0.407;AN=54;BaseQRankSum=4.393;DP=446;FS=29.460;HRun=8;HaplotypeScore=75.6445;InbreedingCoeff=0.7693;MQ=39.21;MQ0=25;MQRankSum=-5.193;QD=9.95;ReadPosRankSum=3.576;VQSLOD=0.4866;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,19:26:38.08:370,38,0	0/0:15,0:15:21.59:0,22,210	0/0:11,0:4:5.04:0,5,37	0/0:18,0:3:3.86:0,4,23	0/0:21,0:20:33.02:0,33,357	0/0:11,0:12:11.57:0,12,128	0/0:18,0:16:18.36:0,18,164	0/0:25,0:22:39.40:0,39,424	1/1:8,12:20:23.98:230,24,0	0/0:21,0:21:26.11:0,26,293	0/0:21,0:21:24.02:0,24,264	0/1:11,8:18:1.47:197,0,1	1/1:7,8:15:4.42:129,4,0	0/0:14,0:13:27.81:0,28,263	0/0:10,0:10:16.86:0,17,186	0/0:15,0:15:24.07:0,24,290	0/0:27,0:26:35.88:0,36,349	0/0:18,0:17:29.92:0,30,334	1/1:5,5:9:14.51:122,15,0	1/1:5,6:8:5.96:49,6,0	./.	0/1:3,5:6:2.05:101,0,2	1/1:5,4:8:2.90:29,3,0	1/1:7,8:15:14.12:166,14,0	0/0:15,0:15:9.91:0,10,111	1/1:4,13:15:32.89:285,33,0	1/1:8,10:15:26.62:251,27,0	1/1:5,3:6:6.01:57,6,0
chr10	75199262	.	CTG	C	817.30	PASS	AB=0.984;AC=18;AF=0.321;AN=56;BaseQRankSum=2.319;DP=684;FS=2.210;HRun=0;HaplotypeScore=139.2315;InbreedingCoeff=0.2055;MQ=46.26;MQ0=24;MQRankSum=-0.319;QD=2.75;ReadPosRankSum=2.062;VQSLOD=2.6748;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:33:10.53:11,0,246	0/1:14,1:15:19.53:20,0,124	0/0:19,0:8:4.09:0,4,17	0/0:24,0:10:11.02:0,11,75	0/1:41,0:39:39.16:39,0,533	0/1:17,0:15:13.64:14,0,250	0/0:25,1:17:24.28:0,24,313	0/0:34,0:26:17.43:0,17,251	0/0:22,0:19:23.26:0,23,245	0/0:50,0:45:37.11:0,37,374	0/0:25,0:25:8.60:0,9,60	0/0:17,0:16:20.50:0,21,190	0/0:23,0:19:12.60:0,13,101	0/0:24,0:20:12.04:0,12,156	0/1:23,0:21:4.26:4,0,246	0/0:20,0:20:9.04:0,9,28	0/1:26,2:25:67.86:68,0,253	0/0:17,0:17:14.69:0,15,148	0/1:22,0:17:10.01:59,0,10	1/1:11,0:10:6:55,6,0	1/1:44,2:33:41.15:395,41,0	0/0:25,0:23:11.35:0,11,83	0/0:30,1:31:11.37:0,11,84	1/1:22,1:19:0.47:1,0,0	0/0:28,0:25:4.19:0,4,13	0/1:16,0:13:24.51:142,0,25	1/1:15,2:16:16.74:147,17,0	1/1:3,0:3:3:28,3,0
chr10	75199290	.	ATG	A	378.33	PASS	AB=0.968;AC=21;AF=0.404;AN=52;BaseQRankSum=2.458;DP=1171;FS=0.811;HRun=0;HaplotypeScore=147.8446;InbreedingCoeff=0.2044;MQ=27.00;MQ0=221;MQRankSum=0.551;QD=0.56;ReadPosRankSum=0.856;VQSLOD=2.8110;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:46,4:41:0.89:2,1,0	0/0:20,0:14:7.51:0,8,43	./.	./.	0/0:49,0:36:24.82:0,25,254	0/0:20,0:14:6.90:0,7,82	0/0:54,2:30:17.24:0,17,229	0/0:82,0:20:31.81:0,32,335	0/1:30,4:25:13.70:53,0,14	0/1:84,1:60:84.41:84,0,250	0/0:43,2:39:2.37:0,2,8	1/1:35,4:21:9.03:107,9,0	0/1:42,2:31:3.88:4,0,5	0/0:37,0:25:16.14:0,16,174	0/0:40,1:22:11.30:0,11,167	0/0:34,2:25:1.25:0,1,3	0/1:51,0:34:6.99:7,0,213	0/0:25,0:18:13.54:0,14,77	0/1:23,0:10:1.75:2,0,45	1/1:25,1:15:2.33:11,2,0	0/1:102,0:35:4.48:4,0,38	1/1:46,2:36:9.03:107,9,0	1/1:48,7:48:7.51:103,8,0	0/1:37,5:27:0:0,0,0	0/0:53,0:43:0.89:0,1,2	0/1:49,1:23:20.52:21,0,47	0/1:24,0:13:12.32:12,0,15	1/1:7,0:3:0.47:1,0,0
chr10	75199308	.	GTGTA	G	899.95	PASS	AB=0.990;AC=31;AF=0.596;AN=52;BaseQRankSum=2.699;DP=1448;FS=29.121;HRun=0;HaplotypeScore=159.3780;InbreedingCoeff=-0.3744;MQ=23.32;MQ0=346;MQRankSum=-0.391;QD=0.75;ReadPosRankSum=1.200;VQSLOD=1.2787;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:31:2.95:20,3,0	0/1:26,1:16:22.54:23,0,40	./.	./.	0/1:60,0:36:43.81:44,0,205	0/1:30,0:18:11.34:11,0,44	0/0:67,0:35:15.93:0,16,243	0/0:128,0:19:39.87:0,40,483	0/1:41,0:26:23.95:42,0,24	0/1:106,0:61:99:339,0,319	1/1:49,1:39:2.60:10,3,0	0/1:44,2:24:13.81:36,0,14	0/1:51,0:34:60.74:69,0,61	0/1:53,0:29:10.55:11,0,157	0/1:56,0:29:27.11:27,0,66	1/1:34,0:22:3.85:21,4,0	0/1:58,0:33:26.82:27,0,398	0/1:26,0:16:30.43:60,0,30	0/1:28,0:6:18.15:21,0,18	1/1:36,0:15:2.79:22,3,0	1/1:138,0:38:2.72:73,3,0	0/1:66,3:46:7.61:8,0,55	0/1:70,2:58:18.50:19,0,31	0/0:53,0:31:0:0,0,0	1/1:65,0:49:2.98:22,3,0	0/1:67,0:28:64.75:65,0,82	1/1:30,0:12:2.59:52,3,0	1/1:14,0:5:2.98:22,3,0
chr10	75199310	.	GTA	G	1228.11	PASS	AB=0.986;AC=30;AF=0.577;AN=52;BaseQRankSum=2.326;DP=1482;FS=26.585;HRun=0;HaplotypeScore=149.4837;InbreedingCoeff=-0.3716;MQ=22.88;MQ0=361;MQRankSum=0.637;QD=0.96;ReadPosRankSum=2.436;VQSLOD=1.1207;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:30:2.97:20,3,0	0/1:26,0:15:20.12:20,0,41	./.	./.	0/1:62,0:36:54.87:55,0,165	0/1:31,0:18:11.45:11,0,44	0/0:67,1:36:20.40:0,20,221	0/0:136,0:20:47.13:0,47,473	0/1:41,1:25:2.72:57,0,3	0/1:106,6:62:99:487,0,344	1/1:45,4:37:2.60:10,3,0	0/1:48,1:25:18.98:33,0,19	0/1:51,0:34:41.05:91,0,41	0/1:55,1:30:23.24:23,0,131	0/1:57,0:30:43.15:43,0,63	1/1:30,3:22:5.92:39,6,0	0/1:59,0:32:28.62:29,0,274	0/1:26,0:16:22.38:70,0,22	0/1:30,0:6:18.19:30,0,18	0/1:38,0:17:6.66:21,0,7	1/1:141,0:39:10.44:92,10,0	0/1:70,0:46:18.91:19,0,22	0/1:70,1:57:10.61:31,0,11	0/1:54,0:31:0.02:0,0,0	0/1:61,5:50:0.59:17,0,1	0/1:68,0:29:72.10:72,0,82	1/1:29,1:12:9.43:81,9,0	1/1:14,0:5:2.99:23,3,0
chr10	75199326	.	GTA	G	556.80	PASS	AB=0.987;AC=23;AF=0.479;AN=48;BaseQRankSum=2.545;DP=1712;FS=24.996;HRun=0;HaplotypeScore=142.2241;InbreedingCoeff=-0.2070;MQ=19.95;MQ0=467;MQRankSum=-3.165;QD=0.50;ReadPosRankSum=0.136;VQSLOD=1.2125;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:27,0:16:44.70:45,0,45	./.	./.	0/1:57,0:26:47.72:48,0,130	0/1:35,0:17:13.93:19,0,14	0/0:92,0:49:19.38:0,19,204	0/0:193,0:25:65.83:0,66,778	0/1:50,0:29:25.05:36,0,25	0/1:116,1:59:99:267,0,310	./.	0/1:60,0:25:3.37:3,0,61	0/1:57,1:36:62.77:63,0,72	0/1:64,2:34:20.84:21,0,172	1/1:56,1:26:2.99:23,3,0	1/1:42,0:20:2.94:18,3,0	0/1:69,1:33:8.25:8,0,276	0/1:32,1:16:23.78:24,0,80	0/0:34,0:3:2.54:0,3,17	0/0:39,0:16:4.83:0,5,47	1/1:170,5:43:0.35:1,0,0	0/1:77,2:53:8.74:9,0,42	0/0:72,1:56:6.40:0,6,71	0/1:55,1:30:0.02:0,0,0	0/0:68,1:51:1.82:0,2,5	0/1:66,2:22:49.79:50,0,180	1/1:35,0:11:3.74:22,4,0	1/1:18,0:8:5.82:35,6,0
chr10	75199340	.	GTA	G	692.28	PASS	AB=0.995;AC=19;AF=0.380;AN=50;BaseQRankSum=1.620;DP=1955;FS=1.201;HRun=0;HaplotypeScore=157.7011;InbreedingCoeff=-0.1464;MQ=18.96;MQ0=544;MQRankSum=-2.266;QD=0.69;ReadPosRankSum=-2.462;VQSLOD=2.3135;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/1:32,0:17:45.37:51,0,45	./.	./.	0/1:55,0:23:12.36:12,0,157	0/1:45,0:23:16.20:16,0,60	0/0:87,2:44:13.26:0,13,194	0/0:216,0:28:68.79:0,69,1008	0/1:57,0:32:18.26:33,0,18	0/1:117,4:59:93.04:387,0,93	0/0:63,1:45:0.47:0,0,1	0/1:65,0:24:1.08:1,0,78	0/1:72,0:38:61.79:62,0,136	0/1:71,0:36:12.03:12,0,203	1/1:64,0:29:2.98:22,3,0	1/1:52,0:24:3.38:11,3,0	0/1:80,0:36:8.12:8,0,312	0/0:41,0:18:0.09:0,0,142	0/1:52,0:5:13.01:13,0,14	0/1:44,1:17:0.65:1,0,48	0/0:207,0:55:5.61:0,6,35	0/0:96,0:66:12.53:0,13,51	0/0:79,0:55:8.79:0,9,75	0/1:65,0:33:0:0,0,0	0/0:45,27:52:4.41:0,4,16	0/1:81,1:26:99:146,0,158	1/1:44,0:16:8.74:52,9,0	0/0:21,0:12:3.91:0,4,31
chr10	75199342	.	ATG	A	108.91	PASS	AB=0.990;AC=8;AF=0.160;AN=50;BaseQRankSum=2.364;DP=1976;FS=3.438;HRun=0;HaplotypeScore=164.1425;InbreedingCoeff=0.1936;MQ=19.03;MQ0=552;MQRankSum=-2.016;QD=0.25;ReadPosRankSum=0.431;VQSLOD=2.4505;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:32,0:17:5.73:0,6,63	./.	./.	0/0:51,1:21:4.45:0,4,144	0/0:46,0:23:5.80:0,6,67	0/0:91,3:46:14.33:0,14,176	0/0:216,0:28:71.52:0,72,913	0/0:57,1:33:9.32:0,9,54	0/1:127,2:62:99:102,0,222	0/0:63,2:45:0.47:0,0,1	0/0:65,2:24:11.16:0,11,73	0/1:73,1:39:18.43:18,0,187	0/0:72,0:36:11.98:0,12,200	0/1:63,0:28:0:0,0,0	1/1:56,0:26:5.90:43,6,0	0/0:82,0:36:29.36:0,29,343	0/0:43,0:19:20.44:0,20,172	0/0:54,1:5:3.01:0,3,39	0/0:45,1:17:3.01:0,3,38	0/0:205,1:56:3.04:0,3,9	0/0:99,1:68:3.32:0,3,12	0/0:79,2:57:8.60:0,9,65	0/0:67,1:35:1.82:0,2,5	0/0:69,2:51:4.41:0,4,16	0/1:74,1:25:45.80:46,0,167	1/1:42,1:15:3.56:13,4,0	0/0:23,0:13:1.84:0,2,41
chr10	75199344	.	G	GA	56.79	PASS	AB=0.958;AC=9;AF=0.173;AN=52;BaseQRankSum=5.582;DP=2009;FS=20.196;HRun=0;HaplotypeScore=167.0355;InbreedingCoeff=0.4173;MQ=19.03;MQ0=548;MQRankSum=-2.132;QD=0.18;ReadPosRankSum=-3.027;VQSLOD=0.8469;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:58,0:35:0.34:1,0,0	0/0:33,0:17:12.40:0,12,137	./.	./.	0/0:54,0:22:8.38:0,8,125	0/0:47,0:24:8.78:0,9,124	0/0:96,0:46:18.33:0,18,174	0/0:217,0:27:78.26:0,78,1073	0/0:60,0:34:7.07:0,7,115	0/0:131,0:64:99:0,134,1451	1/1:67,0:47:0.89:2,1,0	0/0:66,0:24:14.72:0,15,150	0/0:77,0:41:35.98:0,36,405	0/0:72,0:36:18.06:0,18,250	0/0:65,0:30:2.99:0,3,23	0/0:58,0:27:2.99:0,3,24	0/0:82,0:36:25.12:0,25,543	0/0:41,0:19:22.49:0,22,269	0/0:57,0:5:6.02:0,6,81	0/0:47,0:18:5.99:0,6,70	0/0:209,0:58:6.02:0,6,83	1/1:96,3:68:10.26:113,10,0	0/0:82,0:58:6.92:0,7,49	0/0:70,0:37:1.82:0,2,5	1/1:72,0:52:3.37:9,3,0	0/0:77,1:26:12.19:0,12,578	0/0:43,0:15:9.03:0,9,109	0/1:22,1:13:37.69:38,0,50
chr10	75199352	.	G	GTA	77.15	PASS	AB=0.993;AC=9;AF=0.180;AN=50;BaseQRankSum=3.343;DP=2108;FS=3.760;HRun=0;HaplotypeScore=177.1364;InbreedingCoeff=0.0240;MQ=18.84;MQ0=564;MQRankSum=-1.093;QD=0.13;ReadPosRankSum=0.756;VQSLOD=2.4908;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:63,0:37:0:1,0,0	0/0:31,0:15:10.32:0,10,93	./.	./.	0/0:59,0:25:9.92:0,10,139	0/0:57,1:30:8.74:0,9,103	0/0:106,0:48:17.27:0,17,188	0/0:222,0:29:86.31:0,86,1113	0/1:62,0:33:11.68:12,0,62	0/0:132,0:67:13.27:0,13,517	./.	0/1:72,1:26:30.64:73,0,31	0/0:81,1:43:6.90:0,7,219	0/0:79,0:39:18.02:0,18,230	0/0:75,0:33:2.12:0,2,7	0/0:62,0:30:2.29:0,2,5	0/0:86,0:36:3.29:0,3,383	0/0:46,0:22:10.90:0,11,214	0/0:61,0:5:5.93:0,6,40	0/0:49,0:20:2.92:0,3,45	0/0:221,0:64:8.97:0,9,104	0/1:99,0:65:0.13:0,0,27	0/1:83,0:59:6.22:6,0,34	0/0:70,0:37:2.99:0,3,24	1/1:73,0:50:5.42:23,5,0	0/1:80,1:27:34.02:34,0,328	0/1:44,1:17:25.08:45,0,25	0/0:22,0:12:7.84:0,8,94
chr10	75199354	.	GTA	G	549.08	PASS	AB=0.989;AC=15;AF=0.288;AN=52;BaseQRankSum=4.249;DP=2121;FS=3.639;HRun=0;HaplotypeScore=174.9191;InbreedingCoeff=0.1024;MQ=18.89;MQ0=557;MQRankSum=-1.672;QD=0.52;ReadPosRankSum=-0.537;VQSLOD=2.7708;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:63,0:39:0:0,0,0	0/0:31,1:16:3.64:0,4,80	./.	./.	0/0:60,0:26:4.45:0,4,165	0/0:58,0:32:8.89:0,9,109	0/0:106,0:48:13.76:0,14,202	0/0:217,0:29:85.41:0,85,881	0/1:59,0:33:14.82:15,0,55	0/1:125,3:66:99:316,0,175	0/0:67,2:49:0.47:0,0,1	0/1:73,0:26:0.93:1,0,34	0/1:80,2:44:25.29:25,0,186	0/0:80,0:39:0.98:0,1,226	0/1:76,0:33:0:0,0,0	1/1:58,3:30:4.83:49,5,0	0/0:86,0:35:18.35:0,18,388	0/1:48,0:24:17.13:17,0,133	0/0:67,0:5:8.01:0,8,78	0/0:50,0:21:5.95:0,6,71	1/1:221,4:67:8.78:53,9,0	0/1:97,1:64:15.08:20,0,15	0/0:80,2:58:9.33:0,9,51	0/0:69,0:37:6:0,6,53	0/0:71,1:49:1.50:0,1,8	0/1:81,2:30:99:147,0,227	1/1:45,1:17:7.27:41,7,0	0/0:23,0:12:4.71:0,5,71
chr10	75199356	.	ATG	A	106.36	PASS	AB=0.976;AC=14;AF=0.269;AN=52;BaseQRankSum=3.380;DP=2137;FS=4.399;HRun=0;HaplotypeScore=178.3556;InbreedingCoeff=0.0981;MQ=18.94;MQ0=557;MQRankSum=-0.894;QD=0.10;ReadPosRankSum=-0.006;VQSLOD=2.6790;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:63,1:40:0:0,0,0	0/0:31,0:16:9.42:0,9,119	./.	./.	0/0:60,1:27:4.45:0,4,132	0/0:60,0:32:11.07:0,11,145	0/0:105,1:48:14.68:0,15,202	0/0:222,0:29:51.02:0,51,596	0/1:57,2:31:1.20:1,0,69	0/1:128,1:65:12.43:12,0,293	0/0:70,0:50:0.47:0,0,1	0/1:70,2:25:5.69:6,0,69	0/1:82,2:44:10.86:11,0,204	0/0:80,0:40:22.94:0,23,275	0/1:73,3:33:0:0,0,0	1/1:60,2:29:2.91:27,3,0	0/1:85,2:35:1.91:2,0,299	0/0:50,0:25:23.14:0,23,192	0/0:66,0:5:8.94:0,9,82	0/0:49,1:22:4.26:0,4,41	1/1:223,6:70:6.90:76,7,0	0/1:92,6:64:23.69:24,0,25	0/0:79,3:59:7.40:0,7,37	0/0:71,0:37:6.02:0,6,69	0/1:70,1:48:5.03:6,0,5	0/1:82,0:32:66.56:67,0,316	0/0:47,2:20:3.32:0,3,17	0/0:22,0:12:9.09:0,9,91
chr10	75199366	.	G	GTA	46.19	PASS	AB=0.995;AC=9;AF=0.180;AN=50;BaseQRankSum=3.747;DP=2101;FS=10.427;HRun=0;HaplotypeScore=186.2575;InbreedingCoeff=-0.0283;MQ=19.40;MQ0=506;MQRankSum=-1.838;QD=0.08;ReadPosRankSum=-0.111;VQSLOD=1.5245;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:63,0:40:1.25:3,1,0	0/0:30,0:15:13.73:0,14,157	./.	./.	0/1:61,0:32:7.22:7,0,171	0/0:64,1:37:16.19:0,16,174	0/0:113,1:52:11.51:0,12,180	0/0:213,0:23:57.63:0,58,747	0/1:57,0:30:1.85:2,0,39	0/1:131,0:66:38.35:38,0,557	./.	0/1:69,0:26:21:21,0,46	0/0:82,0:43:20.55:0,21,218	0/0:79,0:40:24.02:0,24,300	0/0:81,0:38:5.88:0,6,45	0/0:59,0:28:3.46:0,3,25	0/0:80,1:33:37.81:0,38,328	0/0:50,0:27:27.95:0,28,192	0/0:58,0:6:8.97:0,9,89	0/0:46,0:22:5.74:0,6,78	0/0:230,1:72:8.91:0,9,62	0/0:97,0:62:8.47:0,8,30	0/0:76,0:54:7.52:0,8,62	0/0:70,0:36:5.87:0,6,35	0/1:62,0:42:1.64:6,0,2	0/1:83,1:33:51.99:52,0,399	0/1:47,1:20:31.60:32,0,40	0/0:21,0:12:9.57:0,10,75
chr10	75199370	.	GTGTA	G	391.08	PASS	AB=0.994;AC=14;AF=0.269;AN=52;BaseQRankSum=4.000;DP=2036;FS=3.655;HRun=0;HaplotypeScore=185.2399;InbreedingCoeff=-0.0931;MQ=19.41;MQ0=484;MQRankSum=-4.575;QD=0.50;ReadPosRankSum=-0.589;VQSLOD=2.6015;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:63,0:39:2.24:7,2,0	0/1:26,0:12:17.04:17,0,121	./.	./.	0/0:58,0:32:13.73:0,14,198	0/0:64,0:35:13.39:0,13,219	0/0:114,0:53:18.86:0,19,238	0/0:209,0:20:50.66:0,51,486	0/0:58,0:30:0.64:0,1,62	0/1:130,1:64:99:241,0,394	0/0:69,0:46:0.47:0,0,1	0/1:66,0:25:10.04:10,0,70	0/1:78,0:40:50.52:51,0,196	0/0:78,0:40:23.81:0,24,320	0/1:79,0:38:2.38:2,0,8	1/1:56,0:27:5.59:26,6,0	0/0:77,1:33:6.50:0,7,346	0/1:48,1:28:39.40:39,0,232	0/0:53,0:6:8.97:0,9,104	0/0:42,0:20:6.96:0,7,122	0/0:229,0:71:8.49:0,8,66	0/1:93,1:62:11.63:14,0,12	0/0:69,0:48:6.12:0,6,31	0/0:68,0:36:6.02:0,6,142	0/0:57,0:37:4.31:0,4,14	0/1:81,0:32:44.08:44,0,296	0/1:46,1:20:17.23:66,0,17	0/1:20,0:12:11.59:12,0,118
chr10	75199372	.	GTA	G	474.14	PASS	AB=0.993;AC=17;AF=0.327;AN=52;BaseQRankSum=4.677;DP=2000;FS=4.355;HRun=0;HaplotypeScore=178.9354;InbreedingCoeff=-0.0904;MQ=19.48;MQ0=472;MQRankSum=-3.455;QD=0.43;ReadPosRankSum=-0.965;VQSLOD=2.2423;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:59,0:36:2.37:8,2,0	0/1:24,0:12:17.80:18,0,117	./.	./.	0/0:58,0:32:8.41:0,8,130	0/0:61,2:37:16.43:0,16,190	0/0:116,0:53:18.86:0,19,206	0/0:209,0:20:53.63:0,54,478	0/0:58,0:30:7.75:0,8,52	0/1:126,0:63:99:318,0,288	0/0:65,1:44:0.47:0,0,1	0/1:65,0:25:19.29:19,0,44	0/1:74,1:39:51.52:52,0,148	0/0:78,0:40:23.80:0,24,275	0/1:74,0:37:2.35:2,0,8	1/1:54,0:27:3.35:15,3,0	0/0:75,0:33:6.52:0,7,292	0/1:48,0:28:41.02:41,0,190	0/0:52,0:6:8.87:0,9,73	0/0:42,0:20:6.94:0,7,77	0/1:224,1:71:8.13:27,0,8	0/1:91,2:61:10.30:10,0,15	0/1:66,0:46:1.38:1,0,25	0/0:66,1:35:6.02:0,6,102	1/1:55,0:36:1.72:4,2,0	0/1:79,1:32:74.39:74,0,305	0/1:44,1:20:14.63:20,0,15	0/0:20,0:12:0.86:0,1,76
chr10	75199374	.	ATG	A	169.74	PASS	AB=0.976;AC=12;AF=0.231;AN=52;BaseQRankSum=5.176;DP=1987;FS=18.633;HRun=0;HaplotypeScore=179.2237;InbreedingCoeff=0.1331;MQ=19.41;MQ0=473;MQRankSum=-3.040;QD=0.28;ReadPosRankSum=-0.421;VQSLOD=1.8293;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:35:1.55:0,2,4	0/0:25,0:12:8.93:0,9,105	./.	./.	0/0:56,0:31:9.98:0,10,131	0/0:64,1:38:2.35:0,2,212	0/0:119,2:55:12.98:0,13,153	0/0:214,0:18:23.98:0,24,284	0/1:58,1:31:8.82:9,0,13	0/1:122,4:62:99:172,0,310	0/0:63,1:42:0.47:0,0,1	0/0:63,0:25:6.85:0,7,57	0/1:72,1:37:20.48:20,0,95	0/0:77,1:41:17.97:0,18,248	0/0:75,0:38:5.74:0,6,41	0/0:51,2:27:1.81:0,2,5	0/0:74,0:31:23.47:0,23,290	0/0:49,0:29:28.40:0,28,246	0/0:49,0:6:2.99:0,3,23	0/0:39,0:17:6.02:0,6,72	0/0:220,0:71:5.44:0,5,40	1/1:92,0:61:6.21:25,6,0	1/1:64,1:45:2.65:12,3,0	0/0:65,0:34:6.01:0,6,60	1/1:51,1:34:4.40:18,4,0	0/1:80,1:32:12.69:13,0,252	0/1:40,3:19:30.15:30,0,38	0/1:20,0:12:3.13:3,0,37
chr10	75199388	.	G	GTA	87.81	PASS	AB=0.997;AC=14;AF=0.280;AN=50;BaseQRankSum=4.176;DP=1909;DS;FS=22.205;HRun=0;HaplotypeScore=180.5711;InbreedingCoeff=0.1611;MQ=19.44;MQ0=478;MQRankSum=-3.066;QD=0.14;ReadPosRankSum=1.956;VQSLOD=1.5732;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:32:3.46:0,3,10	0/0:24,0:13:11.98:0,12,132	./.	./.	0/0:58,0:34:22.26:0,22,250	0/0:62,0:37:26.02:0,26,296	0/0:119,0:53:21.35:0,21,255	0/0:250,0:13:29.96:0,30,354	1/1:49,0:21:4.81:18,5,0	0/1:129,0:62:24.94:25,0,623	./.	0/0:58,0:23:8.65:0,9,71	0/1:72,0:35:41.54:42,0,122	0/0:75,0:39:19.61:0,20,265	0/0:76,0:42:8.92:0,9,108	0/0:51,2:24:4.37:0,4,45	0/0:69,0:32:24.65:0,25,385	0/1:48,1:29:20.24:20,0,221	0/1:43,0:4:12.04:13,0,12	0/0:34,0:15:5.59:0,6,64	0/0:207,1:68:11.77:0,12,75	1/1:78,0:50:2.18:19,2,0	1/1:57,1:40:3.90:42,4,0	0/0:61,0:31:6.02:0,6,91	1/1:41,0:24:3.56:13,4,0	0/1:76,0:28:10.23:10,0,250	0/1:38,0:19:28.30:28,0,51	0/0:19,0:12:6.15:0,6,96
chr10	75199394	.	GTA	G	339.31	PASS	AB=0.978;AC=16;AF=0.308;AN=52;BaseQRankSum=5.184;DP=1796;DS;FS=7.371;HRun=0;HaplotypeScore=171.5899;InbreedingCoeff=0.0472;MQ=19.45;MQ0=459;MQRankSum=-3.405;QD=0.48;ReadPosRankSum=-2.400;VQSLOD=1.8972;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:47,2:30:0.60:4,1,0	0/0:23,0:12:5.79:0,6,73	./.	./.	0/0:52,0:31:0.19:0,0,157	0/1:56,2:33:26.20:26,0,254	0/0:104,2:49:24.50:0,25,218	0/0:250,0:8:17.87:0,18,225	0/0:44,1:21:3.71:0,4,34	0/1:119,5:61:99:287,0,522	0/0:40,3:28:0.47:0,0,1	0/1:47,0:19:3.13:3,0,38	0/1:65,4:34:62.98:63,0,99	0/0:73,0:39:14:0,14,261	0/0:73,0:41:8.64:0,9,104	1/1:48,3:22:1.33:11,1,0	0/1:68,0:32:29.45:29,0,393	0/1:47,1:29:7.70:8,0,190	0/0:39,0:3:3.01:0,3,39	0/0:26,0:11:6.89:0,7,74	0/0:204,1:70:11.77:0,12,119	1/1:73,1:50:2.09:10,2,0	1/1:49,1:32:2.34:18,2,0	0/0:59,0:30:5.81:0,6,104	0/1:33,1:20:0.01:1,0,0	0/0:74,0:28:13.05:0,13,338	0/1:37,0:18:7.28:7,0,43	0/0:18,0:12:7.61:0,8,71
chr10	75199408	.	ATG	A	34.24	PASS	AB=0.984;AC=7;AF=0.135;AN=52;BaseQRankSum=4.533;DP=1560;DS;FS=0.000;HRun=0;HaplotypeScore=154.9592;InbreedingCoeff=0.1618;MQ=20.08;MQ0=401;MQRankSum=-5.069;QD=0.09;ReadPosRankSum=-1.379;VQSLOD=1.8351;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:25:4.20:0,4,22	0/0:16,0:9:1.40:0,1,48	./.	./.	0/0:41,0:28:16.29:0,16,233	0/0:54,0:32:23.24:0,23,361	0/0:88,0:40:28.13:0,28,631	0/0:236,0:3:3.01:0,3,49	0/0:40,1:21:4.95:0,5,28	0/1:107,2:50:99:103,0,473	0/0:38,0:25:0.47:0,0,1	0/0:39,1:15:0:0,0,0	0/0:57,0:29:14.50:0,14,135	0/1:57,2:36:2.96:3,0,292	0/0:71,0:39:15.03:0,15,251	1/1:48,0:21:0.05:0,0,0	0/0:65,1:36:45.21:0,45,884	0/0:36,0:22:19.52:0,20,188	0/0:39,0:2:3.01:0,3,35	0/0:17,1:8:3:0,3,27	0/0:177,0:57:12.04:0,12,185	0/1:62,0:42:1.44:3,0,1	0/1:36,0:24:0:0,0,0	0/0:51,0:27:6.02:0,6,68	0/0:21,0:13:1.55:0,2,4	0/1:68,2:21:11.45:11,0,241	0/0:25,0:15:10.44:0,10,97	0/0:12,0:9:8.50:0,9,107
chr10	75199418	.	GTA	G	299.48	PASS	AB=0.979;AC=16;AF=0.320;AN=50;BaseQRankSum=5.354;DP=1365;DS;FS=3.047;HRun=0;HaplotypeScore=150.9369;InbreedingCoeff=-0.0055;MQ=21.31;MQ0=342;MQRankSum=-4.918;QD=0.54;ReadPosRankSum=-2.753;VQSLOD=2.1682;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,1:23:1.11:0,1,3	0/1:15,0:9:10.37:10,0,59	./.	./.	0/0:36,0:26:16.73:0,17,255	0/1:47,1:31:29.18:29,0,364	0/0:79,0:41:10.02:0,10,672	0/0:193,0:4:11.99:0,12,103	0/0:36,0:18:1.08:0,1,3	0/1:95,0:44:99:162,0,291	0/0:29,0:20:0.47:0,0,1	0/1:30,0:14:0:0,0,0	0/1:48,0:24:38.95:39,0,57	0/1:56,2:37:19.01:19,0,342	0/0:64,2:37:14.51:0,15,287	1/1:39,2:20:8.79:52,9,0	0/0:61,0:37:49.26:0,49,1010	0/1:34,0:21:1.74:2,0,116	0/0:32,0:2:2.94:0,3,18	0/0:17,0:8:3.16:0,3,9	0/0:150,2:53:11.73:0,12,178	1/1:49,1:34:3.60:10,4,0	1/1:33,0:23:2.67:9,3,0	0/0:50,0:28:5.91:0,6,110	./.	0/1:64,1:19:58.27:58,0,146	0/1:20,2:13:18.21:18,0,33	0/1:12,0:9:25.78:26,0,29
chr10	75199420	.	ATG	A	108.43	PASS	AB=0.965;AC=13;AF=0.283;AN=46;BaseQRankSum=4.653;DP=1329;DS;FS=3.627;HRun=0;HaplotypeScore=149.8224;InbreedingCoeff=0.2694;MQ=21.54;MQ0=333;MQRankSum=-4.738;QD=0.28;ReadPosRankSum=0.466;VQSLOD=2.6184;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:15,0:9:5.69:0,6,60	./.	./.	0/0:36,0:26:15.52:0,16,239	0/1:46,1:31:4.41:4,0,319	0/0:81,0:44:13.83:0,14,615	0/0:187,0:7:15.04:0,15,210	0/1:33,2:18:0:0,0,0	0/1:89,4:43:99:102,0,178	0/0:28,1:20:0.47:0,0,1	0/0:32,0:14:0:0,0,0	0/0:47,0:24:5.23:0,5,28	0/0:57,0:37:0.51:0,1,322	0/0:65,0:36:15.05:0,15,245	1/1:35,2:19:3.01:36,3,0	0/0:59,1:37:68.94:0,69,939	0/0:34,1:23:16.63:0,17,96	./.	0/0:16,0:7:3:0,3,27	0/0:144,1:49:8.90:0,9,105	1/1:47,0:32:3.60:10,4,0	1/1:31,0:22:2.22:7,2,0	0/0:50,0:28:6.02:0,6,94	./.	0/1:63,1:18:48.81:49,0,71	0/1:20,1:12:0.97:13,0,1	1/1:11,0:8:0.45:1,0,0
chr10	75199449	.	TGC	T	98.07	PASS	AB=0.984;AC=15;AF=0.357;AN=42;BaseQRankSum=7.452;DP=603;DS;FS=10.270;HRun=0;HaplotypeScore=86.1055;InbreedingCoeff=0.4603;MQ=28.64;MQ0=91;MQRankSum=-6.316;QD=0.79;ReadPosRankSum=-2.046;VQSLOD=0.0063;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:12,0:8:8.47:0,8,80	0/0:18,0:1:3.01:0,3,37	0/0:28,0:1:2.98:0,3,21	0/0:23,0:20:18.06:0,18,309	0/0:30,2:26:26.83:0,27,465	0/0:49,2:41:73.92:0,74,1161	0/0:64,0:25:69.23:0,69,1266	0/1:14,0:10:0:0,0,0	0/1:19,1:9:6.63:68,0,7	./.	0/0:17,1:10:0:0,0,0	0/1:21,0:9:10.50:11,0,23	0/0:37,2:33:10.43:0,10,311	0/0:36,0:29:11.60:0,12,191	1/1:12,1:8:2.94:18,3,0	0/0:49,1:40:45.93:0,46,1310	1/1:11,1:10:9.37:48,9,0	./.	./.	./.	1/1:15,1:8:5.85:35,6,0	1/1:9,0:7:2.22:7,2,0	0/0:16,4:12:2.89:0,3,20	./.	1/1:10,0:3:2.96:19,3,0	1/1:8,0:5:4.21:23,4,0	./.
chr10	75199457	.	TGC	T	46.10	PASS	AB=0.982;AC=13;AF=0.325;AN=40;BaseQRankSum=6.644;DP=541;FS=9.411;HRun=0;HaplotypeScore=77.7818;InbreedingCoeff=0.4184;MQ=29.24;MQ0=80;MQRankSum=-5.043;QD=0.51;ReadPosRankSum=-1.454;VQSLOD=0.4845;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:11,0:7:6.02:0,6,101	0/0:21,0:2:5.99:0,6,80	0/0:33,0:1:3:0,3,27	0/0:20,0:17:11.95:0,12,155	0/0:29,1:23:26.89:0,27,461	0/0:52,0:45:79.77:0,80,1318	0/0:55,0:27:74.82:0,75,1227	1/1:14,0:12:0.47:1,0,0	0/1:14,0:7:11.66:48,0,12	./.	0/0:19,0:10:0:0,0,0	0/1:17,0:7:6.27:23,0,6	0/0:35,1:29:7.08:0,7,276	0/0:32,1:28:8.59:0,9,135	0/0:10,0:7:2.34:0,2,10	0/0:53,1:42:64.01:0,64,1320	1/1:8,0:7:10.94:55,11,0	./.	./.	./.	1/1:10,0:5:4.26:12,4,0	1/1:5,0:3:2.94:18,3,0	0/1:17,1:9:0:0,0,0	./.	./.	1/1:5,0:2:1.55:4,2,0	./.
chr10	75199476	.	GTA	G	47.23	PASS	AB=0.984;AC=11;AF=0.239;AN=46;BaseQRankSum=6.044;DP=1232;FS=2.264;HRun=0;HaplotypeScore=133.3477;InbreedingCoeff=0.2384;MQ=23.62;MQ0=248;MQRankSum=-5.001;QD=0.18;ReadPosRankSum=-2.318;VQSLOD=2.3302;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,1:8:0.08:0,0,1	0/0:16,0:11:6.49:0,6,116	0/0:19,0:2:5.95:0,6,50	./.	0/0:27,0:20:13.58:0,14,188	0/0:40,1:28:30.12:0,30,477	0/0:73,1:54:93:0,93,1477	0/0:142,0:23:54.94:0,55,580	1/1:36,0:27:0.42:1,0,0	0/1:37,1:12:15.71:16,0,196	./.	0/0:48,4:26:0.23:0,0,69	0/1:45,0:24:22.94:56,0,23	0/0:69,0:51:8.62:0,9,191	0/0:66,2:48:8.94:0,9,125	0/0:42,1:25:10.47:0,10,51	0/0:102,1:70:99:0,101,1608	0/0:22,0:16:6.11:0,6,158	0/0:55,0:4:4.52:0,5,23	./.	0/0:134,3:59:20.90:0,21,153	./.	1/1:22,2:16:2.69:8,3,0	0/1:55,0:31:0:0,0,0	./.	0/1:28,0:9:38.88:39,0,90	1/1:23,1:10:6.37:38,6,0	0/0:4,0:2:2.99:0,3,24
chr10	75199496	.	G	GA	184.21	PASS	AB=0.972;AC=11;AF=0.220;AN=50;BaseQRankSum=6.291;DP=1772;DS;FS=20.408;HRun=0;HaplotypeScore=161.6628;InbreedingCoeff=0.1459;MQ=21.33;MQ0=422;MQRankSum=-3.918;QD=0.35;ReadPosRankSum=-4.367;VQSLOD=0.0570;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:11:1.72:4,2,0	0/0:22,0:15:5.54:0,6,83	0/0:2,0:1:3.01:0,3,41	./.	0/1:28,1:19:17.12:17,0,114	0/0:52,0:31:18.13:0,18,291	0/0:125,0:75:96.27:0,96,1300	0/0:249,0:8:24.06:0,24,316	1/1:47,1:35:1.52:46,2,0	0/0:66,0:20:45.15:0,45,620	./.	0/0:74,0:32:16.99:0,17,202	0/1:70,2:34:57.25:57,0,252	0/1:76,3:52:18.76:19,0,241	0/1:95,2:61:51.14:58,0,51	0/1:59,3:39:99:101,0,224	0/0:117,0:75:99:0,124,1615	0/0:34,0:23:28.30:0,28,295	0/0:84,0:7:15.05:0,15,198	0/0:27,0:10:0.47:0,0,1	0/0:240,0:104:53.90:0,54,736	0/0:38,0:20:0.47:0,0,1	0/1:32,0:23:0.34:0,0,0	0/1:74,0:43:0.22:0,0,0	./.	0/0:52,0:17:38.91:0,39,480	0/0:35,0:13:11.71:0,12,120	0/0:4,0:2:3.01:0,3,42
chr10	75199504	.	GTGTA	G	74.96	PASS	AB=0.993;AC=14;AF=0.304;AN=46;BaseQRankSum=6.810;DP=1826;DS;FS=12.862;HRun=0;HaplotypeScore=174.4357;InbreedingCoeff=0.2028;MQ=20.82;MQ0=435;MQRankSum=-5.957;QD=0.11;ReadPosRankSum=-2.820;VQSLOD=1.5361;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:12:0.47:1,0,0	0/0:22,0:14:6.49:0,6,154	./.	./.	0/0:36,0:25:1.58:0,2,286	0/0:49,0:28:18.15:0,18,287	0/0:156,0:87:86.82:0,87,1688	0/1:250,0:6:13.03:13,0,123	1/1:48,0:36:1.95:9,2,0	0/0:69,0:20:20.13:0,20,458	./.	0/0:77,0:33:5.39:0,5,75	0/1:73,1:34:13.38:13,0,229	0/1:76,1:50:10.52:11,0,82	1/1:98,0:61:3.76:30,4,0	0/0:63,0:39:1.16:0,1,267	0/0:117,1:70:23.37:0,23,1861	0/1:34,0:23:99:105,0,252	0/0:81,0:8:13.60:0,14,229	1/1:29,0:10:0.47:1,0,0	0/0:250,0:105:45.24:0,45,1276	./.	1/1:33,0:23:2.59:10,3,0	0/0:72,0:41:0.45:0,0,1	./.	0/0:59,0:18:39.13:0,39,716	0/0:37,0:12:8.97:0,9,102	0/0:4,0:2:3.01:0,3,80
chr10	75199506	.	GTA	G	54.59	PASS	AB=0.984;AC=18;AF=0.391;AN=46;BaseQRankSum=7.296;DP=1828;DS;FS=23.022;HRun=0;HaplotypeScore=163.4792;InbreedingCoeff=0.0397;MQ=20.70;MQ0=435;MQRankSum=-5.797;QD=0.06;ReadPosRankSum=-2.940;VQSLOD=0.8775;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,1:12:2.22:7,2,0	0/0:25,0:15:6.49:0,6,116	./.	./.	0/1:36,1:26:8.15:8,0,198	0/0:49,0:28:9.22:0,9,222	0/0:158,0:89:89.69:0,90,1381	0/1:250,0:5:1.07:1,0,116	1/1:48,0:35:2.45:18,2,0	0/0:69,0:20:17.32:0,17,295	./.	0/1:76,2:32:2.24:2,0,61	0/1:74,2:35:11.91:12,0,177	0/1:77,0:49:39.91:40,0,54	1/1:95,0:60:2.99:20,3,0	0/1:63,0:39:19.59:20,0,220	0/0:114,1:67:19.69:0,20,1384	0/1:34,1:23:30.79:31,0,138	0/0:79,0:8:0.58:0,1,183	1/1:29,0:10:0.47:1,0,0	0/0:247,3:103:12.84:0,13,921	./.	1/1:32,1:23:2.37:9,2,0	0/0:71,2:41:0.46:0,0,1	./.	0/0:61,0:18:36.11:0,36,573	0/1:36,1:12:12.20:12,0,79	0/0:4,0:2:3.01:0,3,58
chr10	75199508	.	ATG	A	129.80	PASS	AB=0.965;AC=13;AF=0.283;AN=46;BaseQRankSum=6.482;DP=1836;DS;FS=44.261;HRun=0;HaplotypeScore=164.7879;InbreedingCoeff=0.1839;MQ=20.75;MQ0=438;MQRankSum=-4.490;QD=0.24;ReadPosRankSum=-1.347;VQSLOD=1.2195;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:13:2.37:0,2,8	0/0:24,1:15:6.02:0,6,97	./.	./.	0/0:40,0:29:18.56:0,19,279	0/0:47,1:29:10.56:0,11,146	0/0:149,6:87:81.13:0,81,1195	0/0:250,0:5:8.98:0,9,99	1/1:48,1:35:3.41:28,3,0	0/0:68,1:19:14.19:0,14,236	./.	0/0:74,4:32:12.15:0,12,100	0/1:74,2:35:3.85:4,0,171	0/1:73,4:50:60.48:60,0,69	1/1:89,6:60:4.70:33,5,0	0/1:63,0:39:31.02:31,0,185	0/0:111,5:69:59.15:0,59,1184	0/1:34,2:23:75.32:75,0,180	0/1:73,2:8:14.10:14,0,159	1/1:30,0:10:0.47:1,0,0	0/0:241,9:103:30.84:0,31,863	./.	1/1:29,4:23:2.22:7,2,0	0/0:69,4:41:0.46:0,0,1	./.	0/0:59,2:18:39.09:0,39,589	0/0:36,1:12:4.65:0,5,97	0/0:4,0:2:3.01:0,3,50
chr10	75199520	.	GTA	G	354.86	PASS	AB=0.963;AC=18;AF=0.391;AN=46;BaseQRankSum=5.990;DP=1844;DS;FS=21.801;HRun=0;HaplotypeScore=157.8988;InbreedingCoeff=-0.0454;MQ=20.63;MQ0=438;MQRankSum=-4.154;QD=0.48;ReadPosRankSum=-2.452;VQSLOD=0.9394;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,1:14:1.55:4,2,0	0/1:28,0:18:12.45:12,0,72	./.	./.	0/1:40,1:29:2.81:3,0,256	0/1:50,0:29:17.37:17,0,117	0/0:167,1:94:65.01:0,65,1283	0/0:250,0:3:8.61:0,9,92	1/1:46,3:34:2.63:45,3,0	0/1:66,2:22:33.40:33,0,252	./.	0/0:73,3:31:2.61:0,3,66	0/1:73,3:34:31.82:32,0,206	0/1:72,4:45:63.24:102,0,63	1/1:88,3:56:10.43:81,10,0	0/1:59,3:38:94.42:94,0,179	0/0:112,1:65:50.02:0,50,1225	0/1:30,5:22:32.29:32,0,295	0/1:74,1:9:27.90:28,0,186	1/1:30,0:10:0.47:1,0,0	0/0:247,3:102:44.85:0,45,1018	./.	0/1:31,1:22:0:0,0,0	0/0:74,0:42:0.93:0,1,2	./.	0/0:65,0:20:31.62:0,32,627	0/0:36,0:12:8.89:0,9,122	0/0:4,0:2:3.01:0,3,56
chr10	75199522	.	ATG	A	107.70	PASS	AB=0.974;AC=15;AF=0.326;AN=46;BaseQRankSum=5.745;DP=1835;DS;FS=15.188;HRun=0;HaplotypeScore=159.2179;InbreedingCoeff=0.1077;MQ=20.61;MQ0=436;MQRankSum=-4.222;QD=0.17;ReadPosRankSum=-1.853;VQSLOD=1.2567;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,1:14:0.89:2,1,0	0/0:29,0:18:1.35:0,1,50	./.	./.	0/0:40,0:28:27.03:0,27,325	0/0:51,0:29:4.96:0,5,99	0/0:167,0:93:71.12:0,71,1144	0/0:250,0:3:6:0,6,59	1/1:49,0:34:3.44:28,3,0	0/1:67,1:22:16.42:16,0,231	./.	0/0:71,3:29:11.30:0,11,88	0/1:72,3:33:10.11:10,0,191	0/1:73,2:44:33.08:33,0,103	1/1:88,2:54:8.12:63,8,0	0/1:59,1:38:31.11:31,0,167	0/0:107,6:65:36.46:0,36,1006	0/1:35,1:23:36.19:36,0,260	0/1:75,1:9:12.05:12,0,148	1/1:32,0:11:0.47:1,0,0	0/0:244,4:103:55.52:0,56,907	./.	0/1:31,1:22:0:0,0,0	0/0:67,7:42:0.46:0,0,1	./.	0/0:65,0:20:33.23:0,33,540	0/0:32,2:11:9.03:0,9,131	0/0:4,0:2:3.01:0,3,50
chr10	75199534	.	GTA	G	113.01	PASS	AB=0.951;AC=14;AF=0.304;AN=46;BaseQRankSum=7.067;DP=1761;DS;FS=31.939;HRun=0;HaplotypeScore=155.5507;InbreedingCoeff=0.0457;MQ=20.50;MQ0=412;MQRankSum=-3.877;QD=0.19;ReadPosRankSum=-2.322;VQSLOD=0.8895;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,1:15:2.94:18,3,0	0/0:24,0:15:8.69:0,9,64	./.	./.	0/0:39,1:30:17.67:0,18,359	0/0:46,0:26:4.13:0,4,110	0/0:166,0:95:86.70:0,87,1332	0/0:205,0:6:14.82:0,15,112	1/1:45,2:31:2.27:13,2,0	0/1:63,3:20:75.78:76,0,261	./.	0/1:67,4:28:3.05:3,0,64	0/1:72,3:32:25.55:26,0,185	0/1:68,3:41:26.74:27,0,147	0/1:82,3:49:7.31:20,0,7	0/1:57,2:35:10.19:10,0,175	0/0:105,1:60:28.50:0,28,1117	0/1:32,3:23:41.74:42,0,304	0/0:86,1:8:1.74:0,2,158	1/1:33,1:11:0.47:1,0,0	0/0:228,7:102:47.05:0,47,1027	./.	0/1:30,2:22:0:0,0,0	0/0:69,3:42:0.44:0,0,1	./.	0/0:66,0:17:38.07:0,38,613	0/0:36,1:12:11.98:0,12,150	0/0:4,0:3:3.01:0,3,35
chr10	75199542	.	GTA	G	64.76	PASS	AB=0.983;AC=16;AF=0.348;AN=46;BaseQRankSum=6.784;DP=1700;DS;FS=40.943;HRun=0;HaplotypeScore=153.7247;InbreedingCoeff=-0.0834;MQ=20.96;MQ0=382;MQRankSum=-5.584;QD=0.10;ReadPosRankSum=-2.328;VQSLOD=0.7942;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:15:2.80:13,3,0	0/0:23,0:15:6.48:0,6,85	./.	./.	0/0:40,1:29:21.13:0,21,398	0/1:47,0:26:1.46:1,0,91	0/0:152,1:89:84.11:0,84,1235	0/0:171,0:5:12.04:0,12,228	0/0:46,0:31:2.83:0,3,21	0/1:64,1:20:34.05:34,0,230	./.	0/1:68,0:27:24.90:25,0,49	0/1:73,0:32:19.94:20,0,157	0/1:72,1:43:31.68:32,0,188	0/1:86,2:52:9.69:10,0,44	0/1:58,0:34:29.79:30,0,129	0/0:104,2:61:41.72:0,42,1025	0/1:36,1:24:9.66:10,0,201	0/0:88,1:8:1.44:0,1,144	1/1:35,0:11:0.47:1,0,0	0/0:229,2:105:55.48:0,55,991	./.	0/1:28,2:20:0:0,0,0	0/0:73,0:43:0.46:0,0,1	./.	0/1:62,2:17:6.94:7,0,505	0/0:36,1:12:8.98:0,9,125	1/1:4,0:3:1.25:3,1,0
chr10	75199560	.	G	GA	37.77	PASS	AB=0.985;AC=9;AF=0.196;AN=46;BaseQRankSum=4.268;DP=1452;DS;FS=18.515;HRun=0;HaplotypeScore=126.6361;InbreedingCoeff=0.2638;MQ=21.85;MQ0=311;MQRankSum=-2.808;QD=0.12;ReadPosRankSum=-1.312;VQSLOD=1.4118;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:10:0.01:0,0,0	0/0:22,0:13:5.63:0,6,84	./.	./.	0/0:40,0:29:26.75:0,27,330	0/0:46,0:30:11.60:0,12,166	0/0:123,0:77:77.50:0,78,1032	0/0:155,0:12:27.09:0,27,376	1/1:34,1:24:1.29:45,1,0	0/0:41,0:16:27.05:0,27,329	./.	0/0:58,0:23:12.05:0,12,97	0/1:68,1:29:0.56:1,0,177	0/0:67,2:44:7.50:0,8,344	0/1:70,2:45:23.33:23,0,49	0/0:51,1:28:12.52:0,13,161	0/0:96,0:58:87.50:0,87,1023	0/1:28,1:18:63.78:64,0,197	0/0:72,0:8:9.03:0,9,110	0/0:31,0:11:0.47:0,0,1	0/0:187,0:91:54.42:0,54,744	./.	0/1:29,0:20:0:0,0,0	1/1:61,0:37:0.46:1,0,0	./.	0/0:50,0:15:36.09:0,36,476	0/0:33,0:12:9.03:0,9,124	0/0:5,0:3:3.01:0,3,39
chr10	75199624	.	G	GA	57.47	PASS	AB=0.981;AC=5;AF=0.093;AN=54;BaseQRankSum=2.285;DP=1579;DS;FS=9.569;HRun=0;HaplotypeScore=105.2842;InbreedingCoeff=0.2204;MQ=19.24;MQ0=412;MQRankSum=-1.746;QD=0.27;ReadPosRankSum=-0.239;VQSLOD=1.3252;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:18:1.25:0,1,3	0/0:13,0:5:3.01:0,3,40	0/0:3,0:1:3.01:0,3,41	0/0:2,0:1:3.01:0,3,41	0/1:44,0:29:0.01:0,0,0	0/0:49,0:31:12.04:0,12,168	0/0:81,0:36:27.82:0,28,412	0/0:246,4:7:21.06:0,21,268	0/1:43,2:23:23.06:34,0,23	0/0:63,0:22:51.01:0,51,617	0/0:25,0:16:2.74:0,3,12	0/0:69,0:33:0.42:0,0,1	0/1:71,1:36:28.97:29,0,159	0/0:70,0:50:12.51:0,13,169	0/0:86,2:48:8.58:0,9,113	1/1:48,2:33:4.87:94,5,0	0/0:70,0:45:58.65:0,59,769	0/0:35,0:23:17.37:0,17,245	0/0:68,0:7:7.27:0,7,86	0/0:18,0:8:3.01:0,3,42	0/0:174,0:67:5.15:0,5,52	0/0:47,0:25:6.02:0,6,78	0/0:43,0:31:0:0,0,0	0/0:64,2:40:12.51:0,13,160	./.	0/0:61,1:16:33.08:0,33,402	0/0:17,0:10:3.01:0,3,42	0/0:13,0:5:9.03:0,9,126
chr10	75199632	.	G	GTA	573.13	PASS	AB=0.951;AC=16;AF=0.348;AN=46;BaseQRankSum=-0.367;DP=1712;DS;FS=9.399;HRun=0;HaplotypeScore=125.8175;InbreedingCoeff=-0.0570;MQ=19.35;MQ0=437;MQRankSum=2.076;QD=0.72;ReadPosRankSum=0.087;VQSLOD=1.7258;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:20:1.25:0,1,3	0/0:17,0:8:0.89:0,1,2	./.	./.	1/1:45,0:28:0.47:1,0,0	0/0:55,0:34:11.94:0,12,183	0/0:87,0:37:2.84:0,3,171	0/0:250,0:9:14.88:0,15,191	1/1:49,4:28:3.61:57,4,0	0/1:76,2:28:52.76:53,0,530	./.	1/1:73,2:35:0.33:1,0,0	0/1:77,3:43:7.20:7,0,116	0/0:70,3:50:14.03:0,14,192	0/1:90,4:50:38.17:38,0,90	0/1:53,4:39:8.53:9,0,40	0/1:71,0:45:21.31:21,0,501	0/1:34,5:27:99:205,0,126	0/0:66,0:8:8.99:0,9,93	0/0:18,1:9:3.01:0,3,46	0/0:189,0:72:3.01:0,3,45	1/1:50,2:29:6.02:102,6,0	./.	0/1:72,6:51:54.46:140,0,54	./.	0/1:68,3:23:64.62:65,0,245	0/0:21,0:11:2.93:0,3,18	0/0:14,0:6:9.03:0,9,136
chr10	75199642	.	G	GTA	117.94	PASS	AB=0.982;AC=15;AF=0.326;AN=46;BaseQRankSum=2.730;DP=1811;DS;FS=1.869;HRun=0;HaplotypeScore=148.4728;InbreedingCoeff=-0.0059;MQ=19.37;MQ0=427;MQRankSum=-0.966;QD=0.16;ReadPosRankSum=1.736;VQSLOD=2.8939;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,1:19:1.25:0,1,3	1/1:17,1:9:2.85:57,3,0	./.	./.	1/1:47,1:30:0.47:1,0,0	0/1:58,1:37:6.85:7,0,78	0/0:99,1:40:13.11:0,13,101	0/0:209,0:9:11.88:0,12,93	0/1:64,0:35:17.17:23,0,17	0/0:96,0:33:48.26:0,48,553	./.	1/1:91,0:41:0.33:1,0,0	0/1:96,1:46:57.48:57,0,150	0/0:66,3:47:8.07:0,8,62	0/1:100,4:55:4.51:5,0,64	0/0:62,0:42:6.35:0,6,58	0/1:68,4:44:29.52:30,0,224	0/0:47,0:34:1.67:0,2,266	0/1:57,0:9:29.06:38,0,29	0/0:21,0:9:2.94:0,3,18	0/0:189,7:77:5.81:0,6,37	1/1:56,1:31:2.44:6,2,0	./.	0/0:87,3:59:8.15:0,8,147	./.	0/1:77,0:26:13.34:13,0,227	0/0:25,0:14:4.98:0,5,25	0/0:19,0:10:14.94:0,15,180
chr10	75199648	.	G	GTA	901.93	PASS	AB=0.997;AC=22;AF=0.458;AN=48;BaseQRankSum=-0.989;DP=1839;DS;FS=9.803;HRun=0;HaplotypeScore=154.4089;InbreedingCoeff=-0.3529;MQ=19.68;MQ0=416;MQRankSum=3.048;QD=0.59;ReadPosRankSum=-0.960;VQSLOD=1.6050;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:21:2.90:0,3,16	1/1:16,0:10:2.82:23,3,0	./.	./.	1/1:50,0:31:0.47:1,0,0	0/1:58,0:36:9.55:21,0,10	0/1:108,0:44:17.03:60,0,17	0/1:177,0:9:9.07:9,0,51	0/1:69,0:40:42.12:55,0,42	0/1:98,0:34:18.12:18,0,575	./.	1/1:96,0:44:0.33:1,0,0	0/0:97,0:48:0.83:0,1,163	0/1:69,1:47:5.73:20,0,6	0/1:111,0:61:57.20:64,0,57	0/1:69,0:48:12.69:13,0,37	0/1:78,0:46:99:101,0,173	0/1:48,1:36:99:294,0,197	0/1:61,0:10:10.44:10,0,99	0/0:23,0:10:3.01:0,3,46	0/1:185,2:71:0.11:0,0,0	1/1:59,1:32:6.02:101,6,0	0/0:51,0:36:1.25:0,1,3	0/1:93,0:60:61.02:170,0,61	./.	0/1:81,0:27:64.15:64,0,398	0/0:25,1:15:2.01:0,2,19	0/0:19,0:11:2.17:0,2,128
chr10	75199654	.	GTA	G	56.01	PASS	AB=0.995;AC=15;AF=0.313;AN=48;BaseQRankSum=2.007;DP=1844;DS;FS=4.881;HRun=0;HaplotypeScore=163.3195;InbreedingCoeff=-0.1505;MQ=20.02;MQ0=396;MQRankSum=-2.612;QD=0.05;ReadPosRankSum=-1.790;VQSLOD=2.4350;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,1:21:1.96:0,2,12	0/0:15,1:10:3.35:0,3,28	./.	./.	1/1:49,0:31:0.68:1,1,0	0/0:54,0:33:6.75:0,7,49	0/1:110,1:40:0.80:1,0,19	0/0:129,0:8:8.61:0,9,48	0/0:73,0:44:2.06:0,2,65	0/1:106,0:37:25.90:26,0,667	./.	1/1:99,1:44:0.29:0,0,0	0/1:97,1:49:25.73:26,0,107	0/1:75,0:52:5.11:5,0,12	0/0:112,0:59:12.70:0,13,104	0/1:73,1:49:6.55:28,0,7	0/1:87,1:53:12.09:12,0,298	0/0:49,0:36:22.44:0,22,536	0/1:64,0:10:27.54:28,0,88	0/0:25,0:11:5.98:0,6,61	0/1:174,3:69:0.05:0,0,0	0/0:61,1:34:6.02:0,6,98	0/0:53,1:38:1.24:0,1,3	0/0:98,1:66:32.90:0,33,396	./.	0/1:79,0:29:18.75:19,0,486	0/1:30,0:17:10.36:15,0,10	0/1:25,0:16:11.90:12,0,161
chr10	75199662	.	GTA	G	68.02	PASS	AB=0.987;AC=12;AF=0.250;AN=48;BaseQRankSum=2.725;DP=1935;DS;FS=8.526;HRun=0;HaplotypeScore=177.2731;InbreedingCoeff=-0.1509;MQ=20.31;MQ0=390;MQRankSum=-3.326;QD=0.07;ReadPosRankSum=-0.520;VQSLOD=1.6915;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:28:1.95:0,2,11	0/0:18,0:10:3.34:0,3,27	./.	./.	1/1:52,2:35:0.69:1,1,0	0/0:61,1:39:13.26:0,13,159	0/1:116,2:40:16.11:16,0,48	0/1:105,1:8:9.20:9,0,27	0/0:73,3:47:15.09:0,15,166	0/0:110,0:39:0.38:0,0,671	./.	0/0:104,2:47:0.33:0,0,0	0/1:101,1:54:51.29:51,0,168	0/1:89,1:61:16.04:16,0,45	0/1:114,2:61:7.84:8,0,218	0/0:82,0:56:5.49:0,5,35	0/0:94,4:57:1.10:0,1,503	0/0:54,1:42:21.15:0,21,566	0/1:61,0:8:17.10:17,0,60	0/0:26,1:11:5.38:0,5,61	1/1:176,7:71:1.25:3,1,0	0/0:64,1:36:6.01:0,6,109	0/0:57,0:38:1.24:0,1,3	0/0:104,2:70:36.49:0,36,588	./.	0/1:78,0:30:50.29:50,0,512	0/0:29,2:17:1.41:0,1,79	0/1:25,1:17:10.69:11,0,180
chr10	75199670	.	G	GTA	107.80	PASS	AB=0.976;AC=7;AF=0.146;AN=48;BaseQRankSum=1.843;DP=2183;DS;FS=1.922;HRun=0;HaplotypeScore=200.8441;InbreedingCoeff=0.0886;MQ=20.42;MQ0=430;MQRankSum=-1.661;QD=0.21;ReadPosRankSum=2.172;VQSLOD=2.9963;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:32:2.82:0,3,17	0/0:24,0:12:2.94:0,3,19	./.	./.	1/1:60,1:40:1.36:3,1,0	0/0:65,0:39:8.16:0,8,134	0/0:119,0:44:19:0,19,116	0/0:134,0:9:8.89:0,9,87	0/0:87,1:56:16.55:0,17,161	0/1:127,2:49:99:113,0,642	./.	0/1:117,1:50:0.07:0,0,0	0/0:110,1:55:38.88:0,39,352	0/1:97,4:69:0.03:0,0,42	0/0:121,3:67:17.43:0,17,221	0/0:90,0:61:9.37:0,9,72	0/0:114,0:70:50.08:0,50,687	0/1:64,1:48:18.70:19,0,528	0/0:64,0:10:12.53:0,13,111	0/0:34,0:17:5.98:0,6,65	0/0:208,0:83:2.11:0,2,8	0/0:74,0:40:6.49:0,6,92	0/0:66,0:44:1.08:0,1,3	0/0:119,4:80:43.81:0,44,528	./.	0/0:87,2:38:17.55:0,18,458	0/0:34,1:16:10.13:0,10,129	0/1:27,1:18:69.59:70,0,96
chr10	75199686	.	GTA	G	55.82	PASS	AB=0.989;AC=14;AF=0.269;AN=52;BaseQRankSum=3.404;DP=2350;DS;FS=14.859;HRun=0;HaplotypeScore=259.9858;InbreedingCoeff=-0.1744;MQ=20.90;MQ0=433;MQRankSum=-3.352;QD=0.06;ReadPosRankSum=-3.830;VQSLOD=0.4550;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:37:2.49:0,2,11	0/0:25,0:12:2.56:0,3,7	./.	./.	0/0:67,0:42:2.23:0,2,24	0/0:67,0:40:8.72:0,9,167	0/0:134,0:52:3.88:0,4,164	0/0:157,0:8:3.93:0,4,128	0/1:98,0:67:6.77:7,0,114	0/1:118,1:47:26.69:27,0,719	0/1:43,1:27:0:0,0,0	0/0:129,0:57:1.45:0,1,16	0/1:109,0:56:54.53:55,0,236	0/1:103,3:71:3.20:3,0,89	0/0:134,2:81:1.77:0,2,258	0/0:92,0:63:12.84:0,13,95	0/1:115,3:74:0.17:0,0,792	0/1:73,1:55:1.38:1,0,634	0/1:62,0:10:0.56:1,0,69	0/1:39,0:19:13.88:14,0,47	0/0:226,0:93:0.22:0,0,26	0/0:89,0:54:5.53:0,6,107	0/1:72,0:51:0.38:1,0,0	0/0:129,1:90:5.19:0,5,717	1/1:31,0:13:1.36:2,1,0	0/0:92,0:42:2.09:0,2,707	0/1:41,0:17:1.85:2,0,155	0/1:30,1:21:46.89:47,0,171
chr10	75199728	.	ATG	A	55.74	PASS	AB=0.982;AC=13;AF=0.250;AN=52;BaseQRankSum=6.936;DP=2037;FS=16.957;HRun=0;HaplotypeScore=242.3363;InbreedingCoeff=0.1088;MQ=21.25;MQ0=395;MQRankSum=-2.685;QD=0.09;ReadPosRankSum=-5.231;VQSLOD=0.1874;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:49,0:28:0.13:0,0,0	0/0:26,0:14:5.08:0,5,99	./.	./.	0/0:53,0:33:12.04:0,12,195	0/0:51,2:33:17.57:0,18,237	0/0:140,1:58:9.75:0,10,407	0/0:175,0:29:60:0,60,753	0/1:74,1:52:27.97:40,0,28	0/0:117,3:43:57.90:0,58,702	0/0:38,0:22:0:0,0,0	0/0:90,1:39:5.85:0,6,63	0/1:75,0:31:22.13:22,0,50	0/1:89,3:65:12.29:12,0,219	0/0:109,0:64:20.88:0,21,339	0/1:80,1:50:58.22:58,0,134	0/0:107,1:69:59.19:0,59,808	0/1:53,2:39:7.49:7,0,377	0/0:47,0:8:2.68:0,3,43	0/0:32,1:15:1.82:0,2,5	0/0:183,2:68:11.30:0,11,123	1/1:83,1:50:3:26,3,0	1/1:46,0:28:0.81:3,1,0	0/0:107,2:62:3.18:0,3,432	1/1:38,0:21:1.36:2,1,0	0/0:77,0:34:60.89:0,61,631	0/0:36,1:16:9.95:0,10,159	0/1:30,0:22:4.26:4,0,156
chr10	75199740	.	GTA	G	83.48	PASS	AB=0.982;AC=15;AF=0.288;AN=52;BaseQRankSum=6.692;DP=1933;FS=23.083;HRun=0;HaplotypeScore=235.1240;InbreedingCoeff=0.0108;MQ=21.26;MQ0=385;MQRankSum=-3.722;QD=0.11;ReadPosRankSum=-2.975;VQSLOD=0.9497;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:46,0:28:0.13:0,0,0	0/1:24,1:13:8.93:9,0,107	./.	./.	0/0:48,0:30:18.03:0,18,280	0/0:47,0:27:3.65:0,4,256	0/0:120,0:52:7.62:0,8,442	0/0:194,0:27:55.38:0,55,746	0/1:65,2:47:8.38:19,0,8	0/0:110,1:41:30.19:0,30,633	0/0:40,0:23:0:0,0,0	0/0:74,0:33:1.57:0,2,49	0/1:62,1:27:32.49:32,0,51	0/0:91,0:65:12.47:0,12,302	0/0:91,4:54:21.30:0,21,339	0/1:75,1:47:13.83:14,0,172	0/0:99,3:65:12.06:0,12,702	0/1:49,1:35:32.05:32,0,415	0/0:47,0:8:1.46:0,1,35	1/1:30,1:14:2.84:14,3,0	0/1:179,3:67:2.11:2,0,145	1/1:82,1:51:2.22:8,2,0	0/0:51,0:33:2.08:0,2,11	0/0:101,0:57:19.75:0,20,470	1/1:39,0:22:1.36:2,1,0	0/0:77,1:32:8.10:0,8,566	0/1:37,0:17:17.70:18,0,189	0/1:32,1:24:60.68:61,0,96
chr10	75199752	.	GTA	G	363.39	PASS	AB=0.976;AC=20;AF=0.385;AN=52;BaseQRankSum=3.966;DP=1823;FS=1.895;HRun=0;HaplotypeScore=231.7146;InbreedingCoeff=-0.0816;MQ=21.94;MQ0=356;MQRankSum=-1.508;QD=0.37;ReadPosRankSum=-4.791;VQSLOD=1.8866;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:37,5:26:2.86:24,3,0	0/0:25,0:12:5.75:0,6,115	./.	./.	0/0:50,0:31:13.80:0,14,321	0/0:42,2:27:5.68:0,6,256	0/0:102,3:50:17.74:0,18,379	0/0:205,0:28:35.64:0,36,684	0/1:65,2:47:16.72:17,0,30	0/1:106,1:41:99:116,0,292	0/1:32,2:20:0:0,0,0	0/0:65,1:32:2.26:0,2,17	0/1:56,0:27:27.62:48,0,28	0/0:89,0:62:17.89:0,18,346	0/0:85,2:53:21.31:0,21,305	0/1:65,0:41:4.38:4,0,196	0/1:86,5:62:10.83:11,0,409	0/1:47,1:33:85.75:86,0,154	0/1:55,0:9:0.85:1,0,10	1/1:30,1:15:5.59:26,6,0	0/1:167,2:71:21.28:21,0,127	0/0:72,0:46:2.80:0,3,25	1/1:44,0:30:1.53:5,2,0	0/0:87,1:49:25.82:0,26,227	1/1:38,1:24:1.36:2,1,0	0/1:72,1:31:51.46:51,0,249	0/1:30,1:14:11.69:12,0,149	0/1:28,2:21:63.68:79,0,64
chr10	75199764	.	G	GTA	146.68	PASS	AB=0.991;AC=13;AF=0.241;AN=54;BaseQRankSum=2.554;DP=1584;FS=4.526;HRun=0;HaplotypeScore=225.1069;InbreedingCoeff=-0.0106;MQ=22.95;MQ0=303;MQRankSum=-0.038;QD=0.24;ReadPosRankSum=-1.162;VQSLOD=2.5734;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,1:20:5.83:38,6,0	0/0:19,0:12:6.02:0,6,92	./.	0/0:11,0:1:2.80:0,3,13	0/0:43,0:28:27.03:0,27,344	0/1:36,0:23:1.21:1,0,222	0/0:88,0:44:36.02:0,36,439	0/0:164,0:29:77.75:0,78,899	0/1:61,0:43:4.70:5,0,36	0/1:93,0:41:33.21:33,0,367	1/1:32,1:21:2.90:25,3,0	0/0:49,1:29:2.92:0,3,17	0/1:49,3:26:37.80:38,0,38	0/0:68,2:53:32.78:0,33,356	0/0:75,0:44:18.45:0,18,274	0/0:58,0:38:11.63:0,12,123	0/0:70,0:50:45.93:0,46,499	0/1:49,0:37:77.82:78,0,90	0/0:49,0:12:14.39:0,14,88	0/1:28,0:17:17.08:17,0,23	0/1:151,1:71:4.69:5,0,121	0/0:71,0:46:2.27:0,2,15	0/0:40,0:27:0.83:0,1,2	0/0:75,2:42:8.59:0,9,82	0/0:38,0:25:0.89:0,1,2	0/1:58,0:28:33.52:34,0,158	0/0:30,0:14:1.21:0,1,115	0/1:24,0:17:6.81:7,0,101
chr10	75199770	.	GTGTA	G	748.15	PASS	AB=0.997;AC=27;AF=0.482;AN=56;BaseQRankSum=4.420;DP=1406;FS=24.331;HRun=0;HaplotypeScore=212.2546;InbreedingCoeff=-0.0730;MQ=25.04;MQ0=248;MQRankSum=-2.561;QD=0.82;ReadPosRankSum=-3.205;VQSLOD=0.6045;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:17:5.98:49,6,0	0/1:17,0:13:5.51:6,0,92	0/1:12,0:3:2.26:2,0,19	0/0:15,0:3:2.18:0,2,52	0/0:39,0:26:20.92:0,21,259	0/0:38,1:27:26.82:0,27,495	0/0:85,0:42:29.47:0,29,447	0/0:119,0:27:53.35:0,53,619	0/1:52,2:40:6.65:21,0,7	0/1:84,0:38:58.87:144,0,59	1/1:28,0:21:2.99:25,3,0	1/1:41,1:26:2.88:15,3,0	1/1:45,0:26:8.98:101,9,0	0/0:65,0:50:4.95:0,5,291	0/0:71,0:43:23.59:0,24,396	0/1:53,0:35:24.86:25,0,43	0/1:62,0:45:35.83:36,0,491	0/1:46,0:34:24.94:117,0,25	0/1:44,0:13:59.05:59,0,70	1/1:26,0:17:11.06:102,11,0	0/1:139,0:69:32.16:34,0,32	0/0:57,0:40:2.24:0,2,15	1/1:33,0:24:2.14:7,2,0	0/1:68,0:40:16.14:16,0,26	1/1:34,0:22:1.77:4,2,0	0/1:50,0:23:65.68:97,0,66	0/1:25,0:14:17.33:17,0,26	0/1:24,0:17:22.73:33,0,23
chr10	75199774	.	ATG	A	55.57	PASS	AB=0.991;AC=20;AF=0.357;AN=56;BaseQRankSum=3.571;DP=1315;FS=23.346;HRun=0;HaplotypeScore=195.6797;InbreedingCoeff=0.1188;MQ=25.96;MQ0=217;MQRankSum=-2.221;QD=0.08;ReadPosRankSum=0.455;VQSLOD=1.4534;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:16:1.55:5,2,0	0/0:15,0:12:6.48:0,6,73	0/0:16,0:3:5.04:0,5,51	0/0:20,0:7:20.62:0,21,197	0/1:30,3:24:55.90:56,0,72	0/0:34,0:24:23.90:0,24,372	0/1:84,1:42:10.20:10,0,245	0/0:99,0:26:32.05:0,32,387	0/1:47,0:36:0.36:0,0,0	0/1:80,0:41:5.89:6,0,40	0/0:29,0:22:2.99:0,3,24	0/1:40,0:27:0:0,0,0	0/1:44,0:25:5.05:5,0,16	0/0:64,0:51:20.76:0,21,245	0/0:68,0:41:20.92:0,21,321	1/1:50,0:35:1.79:6,2,0	0/1:56,1:41:27.42:27,0,390	0/1:46,0:35:17.40:17,0,72	0/0:39,0:12:14.76:0,15,102	0/1:24,0:16:1.91:34,0,2	0/0:128,0:67:7.20:0,7,45	0/1:52,0:37:0:0,0,0	1/1:29,0:20:1.82:5,2,0	0/1:64,0:38:0.23:0,0,0	1/1:33,0:22:1.36:2,1,0	0/0:46,0:22:9.17:0,9,54	0/0:24,0:15:6.35:0,6,31	0/1:24,0:17:5.93:6,0,32
chr10	75199790	.	G	GTA	1508.26	PASS	AB=0.997;AC=22;AF=0.407;AN=54;BaseQRankSum=1.858;DP=1039;FS=15.591;HRun=0;HaplotypeScore=146.7944;InbreedingCoeff=0.5713;MQ=35.10;MQ0=133;MQRankSum=-0.848;QD=3.45;ReadPosRankSum=2.820;VQSLOD=1.3910;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:17:11.81:107,12,0	0/0:13,0:10:11.04:0,11,101	0/0:25,0:11:4.78:0,5,193	0/0:36,0:19:54.05:0,54,600	0/0:37,0:30:29.97:0,30,289	0/0:32,0:24:26.91:0,27,370	0/0:54,0:32:32.07:0,32,385	0/0:49,0:20:53.98:0,54,603	0/1:38,0:30:2.15:10,0,2	0/0:58,0:33:40.43:0,40,316	0/0:27,0:19:11.98:0,12,99	1/1:28,0:21:3.01:48,3,0	1/1:36,1:23:19.06:177,19,0	0/0:47,0:40:22.66:0,23,266	0/0:48,0:32:26.98:0,27,359	1/1:35,0:25:2.85:38,3,0	0/0:48,0:38:20.91:0,21,497	0/0:44,0:35:17.27:0,17,217	0/1:20,0:11:19:133,0,19	1/1:24,1:19:26.80:258,27,0	0/1:89,1:54:16.39:184,0,16	1/1:42,0:34:5.99:50,6,0	1/1:26,0:21:4.89:48,5,0	0/0:56,0:36:2.56:0,3,13	./.	1/1:36,0:21:23.78:364,24,0	0/1:19,0:13:38.55:39,0,61	1/1:14,1:12:11.40:241,11,0
chr10	75199879	.	CT	C	802.58	PASS	AB=0.872;AC=13;AF=0.232;AN=56;BaseQRankSum=5.518;DP=495;FS=4.169;HRun=10;HaplotypeScore=76.8595;InbreedingCoeff=0.5490;MQ=69.56;MQ0=7;MQRankSum=-4.097;QD=6.22;ReadPosRankSum=-0.605;VQSLOD=1.5603;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:69.05:0,69,721	0/0:8,0:8:21.06:0,21,231	0/0:26,0:20:5.20:0,5,158	0/0:17,0:13:15:0,15,144	0/0:33,0:33:60.07:0,60,620	0/0:21,0:20:48.13:0,48,530	0/0:9,0:9:27.04:0,27,280	0/0:26,1:27:37.97:0,38,616	0/0:10,0:10:27.03:0,27,285	1/1:13,4:16:29.74:224,30,0	0/1:11,3:12:11.02:126,0,11	0/0:12,0:12:30.05:0,30,319	0/0:15,0:15:26.86:0,27,289	0/0:16,1:17:12.85:0,13,343	0/0:15,1:16:7.03:0,7,305	1/1:7,2:8:14.95:116,15,0	0/0:24,1:24:28.33:0,28,527	1/1:12,1:13:21.97:149,22,0	0/1:15,4:18:27.54:89,0,28	0/1:16,0:15:1.09:1,0,54	0/1:7,1:8:0.99:48,0,1	0/0:24,0:23:39.01:0,39,395	0/0:22,1:23:36.06:0,36,377	0/0:18,0:18:42.11:0,42,464	1/1:9,1:10:20.94:164,21,0	0/1:18,5:21:47.36:57,0,47	0/0:23,0:22:12.58:0,13,80	0/0:13,0:13:24.44:0,24,75
chr10	75199888	.	T	TC	4836.42	PASS	AB=0.960;AC=23;AF=0.411;AN=56;BaseQRankSum=-1.450;DP=483;FS=8.616;HRun=0;HaplotypeScore=62.4231;InbreedingCoeff=0.9363;MQ=59.12;MQ0=8;MQRankSum=-2.893;QD=24.93;ReadPosRankSum=1.003;VQSLOD=5.5615;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.16:0,69,898	0/0:9,0:9:23.72:0,24,292	0/0:23,0:16:23.09:0,23,324	0/0:15,0:9:14.81:0,15,175	0/0:27,0:27:66.07:0,66,796	0/0:17,1:17:48.16:0,48,655	0/0:9,0:9:27.06:0,27,343	0/0:29,0:29:56.93:0,57,883	0/0:11,0:11:30.02:0,30,372	1/1:9,7:14:41.44:416,41,0	1/1:5,8:12:10.42:266,10,0	0/0:12,0:12:30.07:0,30,395	0/0:15,0:15:32.71:0,33,414	0/0:19,0:19:50.50:0,51,554	0/0:17,0:17:44.77:0,45,514	1/1:3,6:8:17.89:204,18,0	0/1:23,1:23:3.67:4,0,668	1/1:7,8:14:30.04:376,30,0	1/1:12,9:20:32.29:576,32,0	1/1:0,18:17:33.02:415,33,0	1/1:6,3:9:20.08:234,20,0	0/0:21,0:19:41.97:0,42,483	0/0:19,0:19:44.97:0,45,496	0/0:18,0:18:45.13:0,45,594	1/1:3,6:9:26.75:292,27,0	1/1:7,15:20:60.17:774,60,0	1/1:0,25:24:57.19:778,57,0	1/1:0,13:13:36.12:501,36,0
chr10	75199900	.	CT	C	856.46	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.021;DP=484;FS=51.431;HRun=7;HaplotypeScore=75.2583;InbreedingCoeff=0.9877;MQ=57.91;MQ0=1;MQRankSum=-4.081;QD=14.04;ReadPosRankSum=0.489;VQSLOD=-0.1286;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:60.19:0,60,751	0/0:7,0:7:18.06:0,18,226	0/0:24,0:17:20.23:0,20,464	0/0:13,0:8:14.98:0,15,158	0/0:28,0:28:69.09:0,69,811	0/0:17,0:17:45.13:0,45,554	0/0:9,0:9:27.09:0,27,338	0/0:30,0:30:63.05:0,63,748	0/0:11,0:11:33.06:0,33,395	1/1:8,6:13:29.05:240,29,0	1/1:5,7:12:17.17:180,17,0	0/0:13,0:13:33.11:0,33,414	0/0:19,0:19:38.70:0,39,452	0/0:19,0:19:47.85:0,48,602	0/0:17,0:17:48.15:0,48,600	1/1:1,8:9:20.12:185,20,0	0/0:25,0:24:72.20:0,72,881	1/1:6,9:14:23.97:225,24,0	0/0:20,0:20:54.16:0,54,652	0/0:18,0:18:42.12:0,42,511	0/0:10,0:10:24.08:0,24,298	0/0:22,0:19:36.01:0,36,378	0/0:18,0:18:39.11:0,39,466	0/0:19,0:19:48.14:0,48,583	1/1:1,10:11:23.94:200,24,0	0/0:18,0:18:45.14:0,45,560	0/0:26,0:25:66.19:0,66,799	0/0:14,0:14:39.12:0,39,489
chr10	75199901	.	T	TC	1679.90	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=6.244;DP=488;FS=22.058;HRun=1;HaplotypeScore=72.9954;InbreedingCoeff=0.8800;MQ=58.00;MQ0=1;MQRankSum=-3.236;QD=23.66;ReadPosRankSum=-1.704;VQSLOD=2.0249;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.08:0,72,899	0/0:7,0:7:17.73:0,18,250	0/0:25,0:18:46.65:0,47,544	0/0:13,0:8:14.84:0,15,192	0/0:28,0:28:75.06:0,75,925	0/0:17,0:17:48.11:0,48,632	0/0:9,0:9:27.09:0,27,371	0/0:29,0:29:80.77:0,81,942	0/0:11,0:11:33.07:0,33,432	1/1:9,6:14:38.84:485,39,0	1/1:8,4:12:29.79:368,30,0	0/0:12,0:12:33.11:0,33,454	0/0:19,0:19:44.49:0,44,534	0/0:19,0:19:53.92:0,54,708	0/0:16,0:16:48.16:0,48,653	1/1:9,0:9:23.90:287,24,0	0/0:27,0:26:72.18:0,72,936	1/1:13,1:13:35.65:355,36,0	0/0:21,0:21:48.20:0,48,419	0/0:19,0:19:41.81:0,42,349	0/1:10,0:10:6.80:7,0,187	0/0:23,0:20:44.92:0,45,488	0/0:18,0:18:42.10:0,42,541	0/0:19,0:19:48.15:0,48,645	1/1:11,0:11:26.88:355,27,0	0/0:18,0:18:6.66:0,7,257	0/0:28,0:27:53.25:0,53,512	0/0:14,0:14:38.80:0,39,299
chr10	75200087	.	G	GT	4951.67	PASS	AB=0.545;AC=11;AF=0.196;AN=56;BaseQRankSum=-13.133;DP=624;FS=0.817;HRun=0;HaplotypeScore=77.5991;InbreedingCoeff=0.8849;MQ=63.81;MQ0=3;MQRankSum=0.074;QD=41.26;ReadPosRankSum=2.397;VQSLOD=5.5710;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:87.29:0,87,1216	0/0:6,0:6:18.06:0,18,252	0/0:20,0:19:54.14:0,54,714	0/0:20,0:17:48.16:0,48,663	0/0:23,0:23:60.20:0,60,837	0/0:33,0:33:99:0,99,1364	0/0:18,0:18:51.17:0,51,712	0/0:32,0:32:90.30:0,90,1250	0/0:17,0:17:51.17:0,51,713	0/0:15,0:15:39.12:0,39,521	0/0:25,0:25:48.16:0,48,658	0/0:17,0:17:48.12:0,48,649	0/0:21,0:21:63.16:0,63,858	0/0:24,0:24:66.22:0,66,923	0/0:30,0:30:90.28:0,90,1225	0/0:23,0:23:66.19:0,66,901	0/0:52,0:52:99:0,141,1952	0/0:21,0:20:57.15:0,57,772	1/1:1,15:15:45.13:694,45,0	1/1:0,21:21:51.17:815,51,0	1/1:0,29:29:75.26:1199,75,0	0/0:20,0:20:51.17:0,51,712	0/0:12,0:12:30.01:0,30,394	0/0:25,0:25:60.20:0,60,838	0/0:14,0:14:36.12:0,36,503	0/1:3,15:18:32.74:668,0,33	1/1:1,25:26:72.25:1144,72,0	1/1:0,9:9:27.09:431,27,0
chr10	75203332	.	CCA	C	169.80	PASS	AB=0.972;AC=13;AF=0.241;AN=54;BaseQRankSum=3.715;DP=635;FS=1.661;HRun=0;HaplotypeScore=117.7416;InbreedingCoeff=-0.1132;MQ=66.33;MQ0=20;MQRankSum=0.717;QD=0.69;ReadPosRankSum=0.095;VQSLOD=1.8875;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:3.97:0,4,23	0/0:7,0:6:18.06:0,18,269	./.	0/0:34,0:21:3.01:0,3,44	0/0:25,0:24:29.18:0,29,387	0/1:15,3:18:11.54:12,0,203	0/0:29,4:30:14.64:0,15,189	0/1:20,1:19:20.74:21,0,110	0/0:18,0:19:1.62:0,2,33	0/0:25,0:24:5.78:0,6,104	1/1:11,0:12:3.01:34,3,0	0/0:17,0:16:4.06:0,4,38	0/0:13,0:13:2.77:0,3,21	0/1:18,0:17:18.87:19,0,234	0/1:26,2:27:55.20:55,0,470	0/1:22,0:22:31.13:31,0,39	0/1:22,0:21:15.66:16,0,522	0/0:23,0:20:1.54:0,2,11	0/0:25,0:22:6.22:0,6,31	0/0:24,0:24:2.38:0,2,67	0/0:36,0:30:1.72:0,2,4	0/1:23,0:23:24.72:25,0,35	0/0:16,0:16:6.89:0,7,43	1/1:31,0:31:7.73:65,8,0	0/1:17,0:17:3.25:3,0,39	0/1:31,0:30:27.63:28,0,51	0/0:14,0:14:13.69:0,14,113	0/0:4,0:3:7.65:0,8,39
chr10	75203361	.	CACACAG	C	3064.03	PASS	AB=0.993;AC=30;AF=0.556;AN=54;BaseQRankSum=4.852;DP=836;FS=8.846;HRun=0;HaplotypeScore=160.4411;InbreedingCoeff=0.1864;MQ=38.98;MQ0=106;MQRankSum=-2.739;QD=4.86;ReadPosRankSum=0.364;VQSLOD=2.1214;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:53,0:48:39.47:305,39,0	0/0:17,0:14:24.88:0,25,376	./.	0/0:10,0:1:2.99:0,3,24	0/0:32,0:27:25.44:0,25,675	0/0:23,0:21:23.36:0,23,365	0/0:40,0:25:29.77:0,30,336	0/1:41,0:28:8.54:9,0,379	1/1:27,0:23:21.74:176,22,0	0/1:39,0:33:12.28:226,0,12	1/1:14,0:12:2.50:9,2,0	0/1:24,0:19:12.72:169,0,13	1/1:31,0:24:5.40:136,5,0	0/1:26,0:22:9.67:10,0,453	0/0:42,0:35:21.53:0,22,856	0/1:24,0:22:20.57:252,0,21	0/0:34,0:31:30.12:0,30,1201	1/1:28,0:21:1.14:149,1,0	0/1:28,0:22:27.82:121,0,28	1/1:31,3:30:11.96:203,12,0	0/1:47,0:32:14.71:15,0,16	1/1:26,0:22:17.29:221,17,0	1/1:23,0:21:18.39:157,18,0	0/1:53,0:45:99:280,0,111	0/1:21,0:16:3.82:102,0,4	0/1:52,2:41:36.19:435,0,36	1/1:29,0:24:26.70:192,27,0	1/1:8,0:5:7.26:77,7,0
chr10	75203365	.	CAG	C	2491.58	PASS	AB=0.980;AC=33;AF=0.611;AN=54;BaseQRankSum=5.565;DP=846;FS=7.657;HRun=0;HaplotypeScore=135.2123;InbreedingCoeff=0.0839;MQ=38.12;MQ0=114;MQRankSum=-0.716;QD=3.48;ReadPosRankSum=0.775;VQSLOD=1.7716;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:49,3:47:39.46:250,39,0	0/0:18,0:15:21.76:0,22,236	./.	0/0:9,0:1:2.99:0,3,24	0/0:32,0:27:16.89:0,17,461	0/0:25,0:22:5.93:0,6,218	0/0:42,0:27:26.90:0,27,314	0/1:41,5:32:25.01:25,0,395	1/1:27,1:23:20.83:134,21,0	0/1:44,0:35:19.41:316,0,19	1/1:14,0:12:2.50:9,2,0	0/1:24,0:19:28.29:58,0,28	1/1:30,0:22:9.62:152,10,0	0/1:26,0:21:1.08:1,0,304	0/1:42,0:35:20.50:20,0,557	1/1:22,3:23:12.93:102,13,0	0/1:35,0:32:29.84:30,0,645	0/1:23,2:19:14.21:94,0,14	0/1:27,0:20:28.39:158,0,28	0/1:33,0:29:0.97:97,0,1	1/1:47,0:32:3.10:35,3,0	1/1:26,0:22:30.82:259,31,0	1/1:21,0:19:15.56:109,16,0	0/1:52,0:43:99:221,0,110	0/1:20,1:16:10.93:58,0,11	1/1:58,1:42:11.73:401,12,0	1/1:29,1:25:8.19:113,8,0	1/1:8,0:5:2.90:18,3,0
chr10	75203375	.	C	CAG	606.63	PASS	AB=0.971;AC=13;AF=0.260;AN=50;BaseQRankSum=4.667;DP=874;FS=3.791;HRun=0;HaplotypeScore=153.3739;InbreedingCoeff=-0.0353;MQ=35.07;MQ0=149;MQRankSum=1.146;QD=1.61;ReadPosRankSum=1.984;VQSLOD=2.2157;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:48,0:42:46.57:47,0,82	0/0:18,0:15:21.84:0,22,272	./.	./.	0/0:32,0:27:39.07:0,39,529	0/0:27,0:22:36:0,36,441	0/0:46,0:30:48.04:0,48,587	0/0:53,0:37:98.57:0,99,1064	0/1:26,0:21:36.17:36,0,38	0/1:37,2:28:99:106,0,341	./.	0/1:30,1:22:77.18:99,0,77	0/0:31,0:21:13.43:0,13,150	0/0:29,0:22:42.63:0,43,527	0/0:40,1:34:63.01:0,63,804	1/1:20,3:21:1.44:144,1,0	0/0:41,0:36:75.85:0,76,938	0/1:23,1:19:73.11:73,0,133	0/0:26,0:17:36.93:0,37,210	0/1:33,0:28:21.86:22,0,95	0/1:55,3:35:7:7,0,13	0/1:24,1:19:38.84:39,0,76	0/0:22,0:18:5.66:0,6,62	0/1:46,3:40:84.99:85,0,347	1/1:17,2:14:6.02:95,6,0	0/0:74,0:49:27.17:0,27,446	0/0:27,0:21:14.96:0,15,112	0/0:15,0:11:11.60:0,12,74
chr10	75203381	.	CACAG	C	1011.02	PASS	AB=1.000;AC=21;AF=0.420;AN=50;BaseQRankSum=7.601;DP=872;FS=6.002;HRun=0;HaplotypeScore=155.0946;InbreedingCoeff=-0.0201;MQ=34.18;MQ0=165;MQRankSum=-3.737;QD=2.01;ReadPosRankSum=-0.937;VQSLOD=2.2746;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:40,4:37:0.07:78,0,0	0/0:18,0:15:21.52:0,22,327	./.	./.	0/0:35,0:28:23.05:0,23,569	0/0:27,0:21:31.79:0,32,574	0/0:46,0:30:49.54:0,50,894	0/0:54,0:35:48.79:0,49,1025	0/1:26,0:21:26.29:39,0,26	0/1:37,0:24:99:116,0,267	./.	0/1:33,0:24:65.95:66,0,97	0/1:29,0:19:7.93:8,0,107	0/0:31,0:23:12.21:0,12,501	0/0:42,0:35:57.21:0,57,1000	0/1:23,0:20:27.82:35,0,28	0/0:44,0:39:49.59:0,50,1113	0/1:22,0:17:78.86:79,0,132	0/1:27,0:14:29.40:80,0,29	0/1:34,0:29:9.29:49,0,9	0/0:57,0:35:3.92:0,4,20	1/1:23,0:17:14.23:120,14,0	1/1:22,0:18:10.01:60,10,0	0/1:46,0:37:46.45:46,0,430	1/1:19,0:14:5.96:43,6,0	0/1:73,0:45:99:239,0,247	1/1:28,1:22:2.80:65,3,0	0/1:17,0:13:34.81:50,0,35
chr10	75203383	.	CAG	C	1518.12	PASS	AB=0.940;AC=21;AF=0.420;AN=50;BaseQRankSum=7.779;DP=872;FS=4.166;HRun=0;HaplotypeScore=137.5860;InbreedingCoeff=-0.0199;MQ=33.96;MQ0=169;MQRankSum=-3.424;QD=2.72;ReadPosRankSum=-1.058;VQSLOD=2.4001;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:43,1:37:2.65:94,0,3	0/0:18,0:15:21.51:0,22,289	./.	./.	0/0:35,0:28:11.18:0,11,425	0/0:28,0:22:33.95:0,34,498	0/0:48,0:31:55.24:0,55,767	0/0:55,0:35:63.83:0,64,992	0/1:26,0:21:21.57:32,0,22	0/1:34,0:21:99:120,0,208	./.	0/1:34,0:25:22.80:23,0,110	0/1:30,0:19:9.05:9,0,83	0/0:31,0:24:10.59:0,11,373	0/0:42,0:34:31.08:0,31,710	0/1:20,0:17:4.33:4,0,28	0/0:43,0:38:17.27:0,17,809	0/1:22,0:17:75.33:75,0,118	0/1:23,4:14:44.64:201,0,45	0/1:24,10:29:5.02:87,0,5	1/1:53,3:35:2.62:17,3,0	1/1:24,0:18:20.09:158,20,0	1/1:21,0:17:7.93:71,8,0	0/1:47,0:37:4.52:5,0,390	1/1:19,0:14:5.96:43,6,0	0/1:63,11:45:99:546,0,194	0/1:21,8:22:4.44:142,0,4	0/1:16,1:13:33.62:52,0,34
chr10	75203427	.	CAG	C	278.93	PASS	AB=0.952;AC=9;AF=0.180;AN=50;BaseQRankSum=5.997;DP=734;FS=35.690;HRun=0;HaplotypeScore=130.9629;InbreedingCoeff=0.0226;MQ=36.28;MQ0=101;MQRankSum=-2.731;QD=1.61;ReadPosRankSum=-2.045;VQSLOD=0.8532;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:16:5.25:0,5,23	0/0:20,0:19:20.32:0,20,326	./.	./.	0/0:23,0:19:33.10:0,33,583	0/0:31,0:25:32.08:0,32,878	0/0:47,0:40:90.66:0,91,1488	0/0:42,0:28:78.04:0,78,1192	0/1:26,0:23:2.45:2,0,177	0/1:19,2:10:81.66:116,0,82	./.	0/1:36,0:31:54.16:54,0,66	0/1:33,0:23:47.09:47,0,106	0/0:33,0:28:32.56:0,33,859	0/0:39,0:31:54.62:0,55,943	0/1:13,3:13:5.56:43,0,6	0/0:34,0:32:75.06:0,75,1225	0/1:18,2:15:99:109,0,198	0/0:24,0:19:46.15:0,46,530	0/0:23,0:21:8.73:0,9,112	0/0:64,2:51:40.09:0,40,588	0/0:16,0:13:4.19:0,4,14	0/1:14,0:13:11.96:12,0,19	0/0:46,0:38:44.76:0,45,716	1/1:6,0:4:2.99:24,3,0	0/0:55,0:39:49.09:0,49,1125	0/0:24,0:20:24.35:0,24,436	0/0:14,0:13:18.06:0,18,343
chr10	75203429	.	G	GAC	382.93	PASS	AB=0.977;AC=11;AF=0.220;AN=50;BaseQRankSum=5.673;DP=720;FS=26.633;HRun=0;HaplotypeScore=133.5522;InbreedingCoeff=-0.0294;MQ=36.78;MQ0=97;MQRankSum=1.073;QD=1.64;ReadPosRankSum=-1.520;VQSLOD=0.6368;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:16:5.40:0,5,25	0/0:21,0:20:18.03:0,18,227	./.	./.	0/0:23,0:19:33.11:0,33,451	0/0:30,1:26:38.47:0,38,687	0/0:46,0:41:80.94:0,81,1090	0/0:41,0:28:63.09:0,63,784	0/1:22,2:22:55.13:70,0,55	0/1:18,0:9:8.03:31,0,8	./.	0/1:35,1:31:34.28:87,0,34	0/1:33,1:24:60.50:73,0,61	0/0:33,0:28:45.71:0,46,607	0/0:36,0:28:48.01:0,48,641	0/1:16,0:13:5.66:54,0,6	0/0:33,0:31:66.04:0,66,829	0/1:21,0:16:4.07:4,0,152	0/0:22,0:17:32.86:0,33,401	0/0:21,0:19:8.92:0,9,98	0/0:64,0:52:45.09:0,45,568	0/1:17,0:14:12.60:35,0,13	0/1:15,0:13:12:12,0,13	0/1:42,4:38:99:130,0,375	1/1:6,0:4:2.99:24,3,0	0/0:50,0:37:59.09:0,59,731	0/0:24,0:18:25.14:0,25,325	0/0:14,0:13:18.06:0,18,244
chr10	75203441	.	GAC	G	1313.35	PASS	AB=0.939;AC=16;AF=0.286;AN=56;BaseQRankSum=1.036;DP=675;FS=1.265;HRun=0;HaplotypeScore=116.0339;InbreedingCoeff=0.4014;MQ=40.25;MQ0=70;MQRankSum=-0.769;QD=4.54;ReadPosRankSum=1.193;VQSLOD=2.6929;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:8.77:0,9,59	0/0:16,0:16:12.04:0,12,183	0/0:1,0:1:2.96:0,3,19	0/0:4,0:1:2.98:0,3,22	0/1:21,0:18:12.61:13,0,223	0/0:29,0:24:36.10:0,36,524	0/0:43,0:38:54.37:0,54,809	0/0:34,0:26:24.04:0,24,324	0/0:23,0:20:15.79:0,16,169	0/0:17,0:11:6.47:0,6,48	0/1:8,0:8:0:0,0,0	0/1:37,0:31:14.49:14,0,44	0/0:29,0:24:22.91:0,23,138	0/0:21,1:20:2.72:0,3,381	0/0:34,1:29:8.33:0,8,511	0/1:16,0:14:0.70:1,0,40	0/1:29,3:30:89.28:89,0,384	0/0:18,0:17:12.69:0,13,79	1/1:16,2:14:7.94:79,8,0	1/1:16,1:18:20.72:182,21,0	1/1:36,28:51:47.52:481,48,0	0/0:24,0:22:18.73:0,19,145	0/0:18,0:16:2.51:0,3,42	0/0:41,0:37:17.79:0,18,171	0/0:8,0:8:3.46:0,3,24	1/1:32,5:27:23.23:247,23,0	1/1:18,4:17:26.80:276,27,0	0/1:8,4:12:26.30:100,0,26
chr10	75203457	.	C	CAG	349.26	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=6.003;DP=694;FS=6.288;HRun=0;HaplotypeScore=124.9546;InbreedingCoeff=0.3486;MQ=44.61;MQ0=46;MQRankSum=2.374;QD=3.80;ReadPosRankSum=1.556;VQSLOD=2.4336;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,13:34:38.97:389,39,0	0/0:17,0:17:21.03:0,21,256	0/0:9,0:4:12.02:0,12,122	0/0:18,0:12:32.91:0,33,298	0/0:19,0:17:36:0,36,385	0/0:29,0:25:65.24:0,65,785	0/0:40,0:36:72.98:0,73,961	0/0:31,0:26:71.66:0,72,691	0/1:23,0:21:24.80:25,0,229	0/0:21,0:17:41.89:0,42,355	0/0:8,0:8:5.99:0,6,49	0/0:38,0:32:1.85:0,2,129	0/0:24,0:20:10.16:0,10,139	0/0:26,0:22:11.82:0,12,512	0/0:31,0:28:68.89:0,69,786	0/0:20,0:18:16.18:0,16,161	0/0:31,0:29:65.30:0,65,666	0/0:18,0:17:25.02:0,25,171	0/0:22,0:16:45.79:0,46,324	0/0:19,0:19:21.64:0,22,179	0/0:63,0:54:62.18:0,62,467	0/0:26,0:25:14.15:0,14,234	0/0:22,0:21:30.43:0,30,262	0/1:34,0:32:49.86:50,0,188	0/0:12,0:12:15.42:0,15,122	0/0:29,0:25:64.92:0,65,509	0/0:17,0:13:28.93:0,29,215	0/0:12,0:11:17.89:0,18,131
chr10	75203502	.	A	AC	1586.32	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.397;DP=684;FS=0.606;HRun=2;HaplotypeScore=98.4215;InbreedingCoeff=0.9975;MQ=94.90;MQ0=2;MQRankSum=-5.536;QD=33.75;ReadPosRankSum=1.756;VQSLOD=3.6701;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,45:47:99:1681,117,0	0/0:15,0:15:45.14:0,45,556	0/0:40,0:39:99:0,105,1285	0/0:36,0:36:87.19:0,87,1027	0/0:20,0:20:60.19:0,60,743	0/0:16,0:16:45.14:0,45,558	0/0:28,0:28:78.24:0,78,967	0/0:27,0:27:78.24:0,78,955	0/0:23,0:23:69.22:0,69,854	0/0:30,0:30:87.27:0,87,1076	0/0:15,0:15:39.12:0,39,481	0/0:24,0:24:66.21:0,66,818	0/0:15,0:15:45.14:0,45,557	0/0:23,0:23:69.22:0,69,855	0/0:28,0:28:75.23:0,75,929	0/0:21,0:21:54.17:0,54,669	0/0:22,0:22:63.16:0,63,764	0/0:18,0:18:42.13:0,42,520	0/0:22,0:21:57.18:0,57,701	0/0:11,0:11:33.08:0,33,395	0/0:52,0:51:99:0,117,1450	0/0:27,0:27:81.25:0,81,1001	0/0:22,0:21:63.20:0,63,781	0/0:25,0:25:72.23:0,72,890	0/0:25,0:25:75.24:0,75,930	0/0:28,0:26:72.23:0,72,892	0/0:16,0:14:38.99:0,39,483	0/0:8,0:8:24.08:0,24,298
chr10	75205292	.	C	CCA	4422.62	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=2.510;DP=370;FS=29.097;HRun=0;HaplotypeScore=55.3410;InbreedingCoeff=0.9374;MQ=77.90;MQ0=0;MQRankSum=-1.483;QD=43.79;ReadPosRankSum=1.234;VQSLOD=3.5447;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:69.24:1243,69,0	0/0:5,0:5:12.04:0,12,168	0/0:15,0:14:24.88:0,25,505	0/0:13,0:13:29.89:0,30,384	0/0:13,0:13:33.10:0,33,445	0/0:13,0:13:18.06:0,18,252	0/0:19,0:19:51.17:0,51,714	0/0:28,0:27:75.25:0,75,1050	0/0:12,0:12:26.90:0,27,378	1/1:1,19:20:57.16:966,57,0	1/1:0,8:8:21.07:378,21,0	0/0:13,0:13:21.07:0,21,294	0/0:9,0:9:18.06:0,18,252	0/0:7,0:7:9:0,9,126	0/0:7,0:7:15.05:0,15,205	1/1:0,13:13:39.13:702,39,0	0/0:13,0:12:27.09:0,27,378	1/1:2,16:17:33.11:594,33,0	0/0:14,0:14:39.13:0,39,539	0/0:18,0:18:45.15:0,45,629	0/0:11,0:11:18.06:0,18,252	0/0:1,0:1:3.01:0,3,42	0/0:10,0:10:30.10:0,30,420	0/0:13,0:13:30.08:0,30,393	1/1:0,12:12:30.10:540,30,0	0/0:12,0:12:30.09:0,30,404	0/0:13,0:13:36.12:0,36,499	0/0:10,0:10:30.10:0,30,420
chr10	75205615	.	AG	A	912.52	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.715;DP=482;FS=28.977;HRun=2;HaplotypeScore=57.9045;InbreedingCoeff=0.9565;MQ=63.42;MQ0=5;MQRankSum=-2.626;QD=26.84;ReadPosRankSum=0.400;VQSLOD=1.7620;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:78.25:1007,78,0	0/0:4,0:4:12.04:0,12,180	0/0:31,0:16:39.13:0,39,579	0/0:31,0:23:24.29:0,24,646	0/0:13,0:13:39.13:0,39,583	0/0:17,0:17:30.10:0,30,449	0/0:18,0:18:51.17:0,51,752	0/0:40,0:40:99:0,111,1582	0/0:16,0:16:48.16:0,48,718	0/0:15,0:15:42.14:0,42,629	0/0:9,0:9:24.08:0,24,359	0/0:11,0:11:33.11:0,33,494	0/0:12,0:12:36.12:0,36,532	0/0:15,0:15:42.14:0,42,629	0/0:14,0:14:42.14:0,42,629	0/0:16,0:16:48.12:0,48,694	0/0:17,0:17:51.17:0,51,764	0/0:15,0:15:33.11:0,33,494	0/0:14,0:14:42.14:0,42,627	0/0:11,0:11:33.11:0,33,495	0/0:36,0:36:99:0,102,1527	0/0:12,0:12:36.12:0,36,540	0/0:10,0:10:27.09:0,27,396	0/0:18,0:18:39.13:0,39,584	0/0:17,0:17:51.17:0,51,764	0/0:14,0:14:42.14:0,42,629	0/0:16,0:16:45.15:0,45,674	0/0:6,0:6:18.06:0,18,270
chr10	75205716	.	C	CTCACTCACATT	27908.61	PASS	AB=0.677;AC=35;AF=0.625;AN=56;BaseQRankSum=-4.490;DP=538;FS=25.699;HRun=0;HaplotypeScore=149.9745;InbreedingCoeff=0.8914;MQ=69.56;MQ0=3;MQRankSum=-17.469;QD=94.93;ReadPosRankSum=-0.831;VQSLOD=3.1340;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,22:39:98.86:3538,99,0	0/0:8,0:8:18.06:0,18,635	0/0:23,0:23:30.16:0,30,1644	0/0:34,0:33:85.13:0,85,2527	0/0:33,0:33:84.21:0,84,2792	0/0:20,0:20:54.19:0,54,1868	0/0:20,0:20:54.19:0,54,1752	0/0:39,0:39:99:0,108,3593	1/1:9,6:15:39.09:1699,39,0	1/1:5,8:12:30.10:1593,30,0	1/1:0,5:7:12:533,12,0	1/1:5,6:12:27.05:1131,27,0	1/1:9,10:23:54.14:2545,54,0	0/0:21,0:21:57.20:0,57,1945	0/0:23,0:23:60.19:0,60,1977	1/1:1,6:8:18.06:899,18,0	0/0:23,0:23:69.22:0,69,2310	1/1:10,3:14:27.01:1101,27,0	1/1:13,9:24:57.18:2650,57,0	1/1:8,9:15:36.08:1762,36,0	1/1:13,7:23:45.02:1828,45,0	1/1:2,7:10:26.92:874,27,0	1/1:6,4:9:26.83:572,27,0	0/1:11,8:21:40.38:1766,0,40	1/1:6,6:12:26.96:1075,27,0	1/1:7,9:17:51.18:2541,51,0	1/1:8,7:18:36.08:1631,36,0	1/1:0,3:1:3.01:172,3,0
chr10	75205936	.	TGCTCTGCC	T	2917.21	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.168;DP=556;FS=5.033;HRun=0;HaplotypeScore=166.8879;InbreedingCoeff=0.9858;MQ=84.22;MQ0=0;MQRankSum=-9.372;QD=76.77;ReadPosRankSum=1.377;VQSLOD=3.9304;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,130,5496	0/0:10,0:10:27.09:0,27,1159	0/0:12,0:12:36.07:0,36,1408	0/0:25,0:25:74.43:0,74,2485	0/0:13,0:13:25.78:0,26,1180	0/0:18,0:17:54.19:0,54,2417	0/0:23,0:23:69.22:0,69,2919	0/0:24,0:24:72.25:0,72,2953	0/0:24,0:24:72.25:0,72,3219	1/1:0,7:8:24.08:658,24,0	1/1:0,4:4:11.63:239,12,0	0/0:30,0:30:90.27:0,90,3988	0/0:13,0:13:36.11:0,36,1408	0/0:25,0:25:75.26:0,75,3451	0/0:27,0:27:81.28:0,81,3555	1/1:0,8:8:24.08:722,24,0	0/0:33,0:33:96.33:0,96,4153	1/1:1,10:12:36.12:965,36,0	0/0:24,0:24:72.24:0,72,2898	0/0:18,0:17:45.15:0,45,2053	0/0:54,0:54:99:0,163,7230	0/0:15,0:15:33.11:0,33,1386	0/0:8,0:8:21.07:0,21,948	0/0:31,0:31:90.31:0,90,3964	1/1:0,6:6:18.06:506,18,0	0/0:20,0:20:60.21:0,60,2768	0/0:20,0:19:60.21:0,60,2707	0/0:6,0:6:18.06:0,18,820
chr10	75205951	.	GCCT	G	895.75	PASS	AB=0.500;AC=9;AF=0.161;AN=56;BaseQRankSum=9.692;DP=533;FS=5.557;HRun=0;HaplotypeScore=113.2090;InbreedingCoeff=0.9112;MQ=82.19;MQ0=0;MQRankSum=-8.976;QD=25.59;ReadPosRankSum=2.777;VQSLOD=3.1589;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,108,2551	0/0:8,0:8:24.08:0,24,531	0/0:13,0:13:27.19:0,27,802	0/0:19,0:19:57.18:0,57,1260	0/0:16,0:16:40.75:0,41,991	0/0:19,0:18:57.20:0,57,1348	0/0:23,0:23:69.24:0,69,1611	0/0:22,0:22:66.23:0,66,1559	0/0:22,0:22:66.23:0,66,1520	1/1:0,7:7:21.03:239,21,0	0/1:0,4:4:1.75:51,0,2	0/0:32,0:32:96.33:0,96,2265	0/0:10,0:10:27.09:0,27,637	0/0:27,0:27:81.28:0,81,1911	0/0:26,0:26:78.27:0,78,1845	1/1:0,8:8:24.07:264,24,0	0/0:27,0:27:78.25:0,78,1755	1/1:0,10:10:25.34:328,25,0	0/0:18,0:18:54.19:0,54,1276	0/0:18,0:17:48.12:0,48,1074	0/0:52,0:52:99:0,157,3635	0/0:14,0:14:33.11:0,33,710	0/0:13,0:13:39.13:0,39,901	0/0:30,0:30:81.28:0,81,1911	1/1:0,6:6:17.88:177,18,0	0/0:23,0:23:69.24:0,69,1630	0/0:21,0:20:63.21:0,63,1400	0/0:4,0:4:12.04:0,12,282
chr10	75205956	.	AGGC	A	977.88	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.862;DP=554;FS=5.562;HRun=0;HaplotypeScore=116.1985;InbreedingCoeff=0.9203;MQ=80.86;MQ0=0;MQRankSum=-9.562;QD=27.16;ReadPosRankSum=3.308;VQSLOD=3.5761;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,114,2752	0/0:7,0:7:21.07:0,21,516	0/0:13,0:13:39.13:0,39,829	0/0:18,0:18:54.15:0,54,1181	0/0:17,0:17:43.76:0,44,1101	0/0:20,0:19:60.21:0,60,1478	0/0:29,0:29:87.30:0,87,2107	0/0:24,0:24:72.23:0,72,1681	0/0:26,0:26:78.27:0,78,1904	1/1:0,7:7:21.03:253,21,0	1/1:0,4:4:0.24:55,0,0	0/0:33,0:33:99:0,99,2328	0/0:11,0:11:33.11:0,33,783	0/0:29,0:29:87.28:0,87,2080	0/0:26,0:26:78.27:0,78,1916	1/1:0,8:8:24.07:280,24,0	0/0:26,0:26:78.22:0,78,1852	1/1:0,10:11:30.93:366,31,0	0/0:20,0:20:60.20:0,60,1387	0/0:18,0:17:48.16:0,48,1150	0/0:54,0:54:99:0,163,3781	0/0:13,0:13:33.11:0,33,789	0/0:14,0:14:42.14:0,42,1033	0/0:27,0:27:78.27:0,78,1909	1/1:0,6:6:17.95:188,18,0	0/0:26,0:26:78.25:0,78,1869	0/0:21,0:20:63.20:0,63,1452	0/0:3,0:3:9.03:0,9,209
chr10	75205962	.	TG	T	1058.01	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.339;DP=548;FS=2.172;HRun=2;HaplotypeScore=92.5484;InbreedingCoeff=0.9697;MQ=79.01;MQ0=0;MQRankSum=-9.323;QD=25.19;ReadPosRankSum=2.577;VQSLOD=3.6482;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,123,1818	0/0:7,0:7:21.07:0,21,315	0/0:12,0:12:36.11:0,36,508	0/0:16,0:16:45.14:0,45,635	0/0:15,0:15:38.51:0,39,581	0/0:23,0:22:69.23:0,69,1031	0/0:31,0:31:87.27:0,87,1265	0/0:22,0:22:63.21:0,63,944	0/0:28,0:28:84.28:0,84,1254	1/1:2,7:9:23.94:268,24,0	1/1:0,4:4:8.99:86,9,0	0/0:32,0:32:96.33:0,96,1439	0/0:10,0:10:30.10:0,30,450	0/0:28,0:28:81.27:0,81,1213	0/0:25,0:25:75.25:0,75,1124	1/1:0,8:8:24.07:278,24,0	0/0:25,0:25:75.23:0,75,1098	1/1:2,11:13:33.92:373,34,0	0/0:17,0:17:51.17:0,51,764	0/0:18,0:17:45.15:0,45,664	0/0:49,0:49:99:0,138,2047	0/0:16,0:16:39.12:0,39,562	0/0:14,0:14:42.14:0,42,629	0/0:27,0:27:78.25:0,78,1134	1/1:2,6:8:21.04:224,21,0	0/0:26,0:26:75.25:0,75,1121	0/0:17,0:17:51.17:0,51,764	0/0:3,0:3:9.01:0,9,114
chr10	75206187	.	TG	T	1831.37	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.050;DP=466;FS=23.198;HRun=7;HaplotypeScore=57.5164;InbreedingCoeff=0.9904;MQ=71.56;MQ0=0;MQRankSum=-2.401;QD=21.55;ReadPosRankSum=2.214;VQSLOD=2.1285;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:63.14:642,63,0	0/0:5,0:5:11.93:0,12,129	0/0:19,0:18:41.75:0,42,456	0/0:18,0:17:34.35:0,34,384	0/0:10,0:10:30.10:0,30,377	0/0:15,0:15:33.10:0,33,410	0/0:19,0:19:51.60:0,52,614	0/0:28,0:28:75.22:0,75,928	0/0:18,0:18:51.15:0,51,628	1/1:1,13:14:33.07:337,33,0	1/1:0,7:7:21.05:214,21,0	0/0:20,0:20:54.17:0,54,668	0/0:14,0:14:36.11:0,36,442	0/0:16,0:16:42.13:0,42,527	0/0:16,0:16:45.08:0,45,520	1/1:0,13:13:26.91:275,27,0	0/0:13,0:13:30.10:0,30,377	1/1:0,10:10:27.06:275,27,0	0/0:16,0:16:30.10:0,30,377	0/0:14,0:14:36.12:0,36,453	0/0:52,0:52:99:0,132,1628	0/0:9,0:9:24.07:0,24,290	0/0:13,0:13:36.10:0,36,436	0/0:23,0:23:60.19:0,60,750	1/1:0,12:12:27.06:275,27,0	0/0:22,0:22:57.18:0,57,717	0/0:13,0:13:36.11:0,36,444	0/0:8,0:8:21.06:0,21,252
chr10	75206342	.	C	CTTT	1715.06	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=1.599;DP=532;FS=22.332;HRun=6;HaplotypeScore=90.2722;InbreedingCoeff=0.7693;MQ=61.37;MQ0=13;MQRankSum=-3.261;QD=17.87;ReadPosRankSum=-2.467;VQSLOD=-0.5611;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:40.62:41,0,77	0/0:6,0:6:15.05:0,15,217	0/0:48,0:13:31.18:0,31,399	0/0:25,0:12:3.96:0,4,199	0/0:31,0:31:62.54:0,63,968	0/0:20,0:20:45.73:0,46,635	0/0:18,0:18:30.16:0,30,501	0/0:31,0:31:51.52:0,52,764	0/0:17,0:17:35.99:0,36,545	1/1:6,17:20:52.67:789,53,0	1/1:2,15:16:29.93:473,30,0	0/0:8,0:8:14.35:0,14,203	0/0:12,0:12:19.91:0,20,396	0/0:14,0:13:22.72:0,23,333	0/0:10,0:10:1.88:0,2,235	1/1:1,3:4:6.02:137,6,0	0/0:21,0:20:39.60:0,40,505	1/1:2,10:11:15.04:232,15,0	0/0:18,0:18:44.60:0,45,591	0/0:34,0:34:96.74:0,97,1404	0/0:9,0:9:19.89:0,20,303	0/0:15,0:14:32.83:0,33,458	0/0:15,0:15:38.56:0,39,556	0/0:28,0:28:14.99:0,15,616	1/1:1,15:14:12.04:212,12,0	0/0:28,0:27:29.18:0,29,807	0/0:14,0:13:17.83:0,18,288	0/0:13,0:13:39.11:0,39,588
chr10	75206347	.	T	TC	431.81	PASS	AB=0.897;AC=9;AF=0.161;AN=56;BaseQRankSum=5.280;DP=564;FS=16.795;HRun=0;HaplotypeScore=90.6074;InbreedingCoeff=0.7854;MQ=58.33;MQ0=18;MQRankSum=0.485;QD=5.61;ReadPosRankSum=1.577;VQSLOD=2.1867;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:56.86:0,57,454	0/0:7,0:7:17.25:0,17,130	0/0:47,0:12:32.79:0,33,285	0/0:25,0:12:9.07:0,9,138	0/0:33,0:33:75.66:0,76,626	0/0:23,0:23:49.06:0,49,423	0/0:18,0:18:44.31:0,44,353	0/0:34,0:34:69.49:0,69,558	0/0:23,0:22:29.43:0,29,362	0/1:23,3:23:67.34:286,0,67	1/1:18,1:17:17.56:139,18,0	0/0:10,0:10:24.77:0,25,186	0/0:13,0:13:38.52:0,39,309	0/0:14,0:13:32:0,32,258	0/0:11,0:11:31.60:0,32,263	1/1:3,0:3:5.02:20,5,0	0/0:21,0:20:49.36:0,49,429	1/1:12,1:12:9.30:68,9,0	0/0:20,0:20:50.01:0,50,438	0/0:33,0:33:91.25:0,91,817	0/0:12,0:10:27.25:0,27,205	0/0:17,0:16:35.26:0,35,263	0/0:17,0:16:39.59:0,40,334	0/0:27,0:27:63.77:0,64,503	1/1:16,0:14:11.60:68,12,0	0/0:29,0:28:59.17:0,59,477	0/0:14,0:12:17.82:0,18,164	0/0:16,0:15:35.40:0,35,315
chr10	75206365	.	T	TC	596.29	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=4.054;DP=469;FS=5.550;HRun=3;HaplotypeScore=71.1792;InbreedingCoeff=0.8491;MQ=51.17;MQ0=18;MQRankSum=-3.717;QD=7.85;ReadPosRankSum=-1.820;VQSLOD=0.0245;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:21.74:0,22,117	0/0:11,0:11:17.86:0,18,129	0/0:27,0:3:1.55:0,2,4	0/0:15,0:4:4.45:0,4,16	0/0:27,0:27:44.22:0,44,314	0/0:25,0:25:54.12:0,54,422	0/0:15,0:16:25.61:0,26,188	0/0:27,0:27:34.43:0,34,295	0/0:16,0:15:22.69:0,23,171	1/1:21,5:23:44.66:347,45,0	1/1:11,1:13:15.56:93,16,0	0/0:8,0:8:17.82:0,18,129	0/0:10,0:10:26.78:0,27,199	0/0:16,0:15:29.56:0,30,247	0/0:16,0:17:45.74:0,46,338	1/1:6,0:6:8.88:60,9,0	0/0:20,0:20:34.42:0,34,269	1/1:13,0:13:21.82:169,22,0	0/0:15,0:15:20.76:0,21,147	0/0:20,0:20:32.61:0,33,239	0/1:8,0:6:0:0,0,0	0/0:12,0:10:6:0,6,52	0/0:17,0:16:32.53:0,33,243	0/0:20,0:20:36.95:0,37,247	1/1:7,1:8:11.91:92,12,0	0/0:23,0:21:21.74:0,22,292	0/0:15,0:12:17.84:0,18,134	0/0:13,0:12:26.24:0,26,167
chr10	75206904	.	GACACACACACACACACAC	G	2254.85	PASS	AB=0.738;AC=15;AF=0.268;AN=56;BaseQRankSum=7.256;DP=498;FS=19.835;HRun=0;HaplotypeScore=214.8612;InbreedingCoeff=0.5196;MQ=62.09;MQ0=6;MQRankSum=-7.208;QD=16.70;ReadPosRankSum=0.125;VQSLOD=1.3192;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:20.82:0,21,449	0/0:3,0:4:6:0,6,138	0/0:20,0:14:0:0,0,0	0/0:27,0:18:5.98:0,6,47	0/0:29,0:31:45.15:0,45,3331	0/0:18,0:20:27.09:0,27,1828	0/0:23,0:23:33.11:0,33,2321	0/0:21,0:21:14.08:0,14,560	0/0:19,0:22:33.19:0,33,1425	1/1:9,9:18:9.03:435,9,0	1/1:11,6:17:3.01:102,3,0	0/0:10,0:10:6.02:0,6,303	0/0:9,0:8:6.02:0,6,350	0/0:14,0:14:21.07:0,21,1505	0/0:14,0:15:23.40:0,23,1494	1/1:8,4:13:12.04:561,12,0	0/0:29,0:29:27.06:0,27,1762	1/1:3,2:5:6.02:276,6,0	0/0:18,0:18:28.89:0,29,449	0/1:7,0:15:50.48:79,0,50	0/0:18,0:18:8.92:0,9,186	0/0:9,0:15:21.07:0,21,1030	0/0:10,0:11:15.05:0,15,703	0/0:18,0:28:18.06:0,18,1033	1/1:14,5:18:12.04:580,12,0	0/1:16,0:19:75.34:75,0,112	0/1:15,0:23:53.77:268,0,54	1/1:2,0:4:3.01:45,3,0
chr10	75207188	.	G	GA	8891.15	PASS	AB=0.749;AC=25;AF=0.446;AN=56;BaseQRankSum=1.840;DP=1093;FS=16.452;HRun=8;HaplotypeScore=172.4237;InbreedingCoeff=-0.8065;MQ=72.51;MQ0=2;MQRankSum=-6.385;QD=9.16;ReadPosRankSum=1.373;VQSLOD=1.7597;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,15:44:99:303,0,442	0/1:11,4:15:96.33:96,0,232	0/0:47,0:35:35.76:0,36,332	0/0:52,0:38:43.65:0,44,409	0/1:26,16:41:99:431,0,475	0/1:24,1:35:99:152,0,280	0/1:17,1:33:99:111,0,357	0/1:36,27:63:99:725,0,432	0/0:20,0:20:57.01:0,57,516	0/1:40,7:47:99:127,0,736	0/1:29,9:38:99:209,0,552	0/1:26,16:42:99:499,0,383	0/1:23,20:43:99:537,0,452	0/1:30,19:50:99:569,0,502	0/1:21,15:37:99:443,0,438	0/1:21,19:39:99:550,0,354	0/1:26,21:47:99:563,0,491	0/1:15,14:29:99:403,0,275	0/1:36,10:45:99:425,0,407	0/1:31,9:40:99:207,0,584	0/1:19,8:27:99:205,0,343	0/1:25,8:33:99:187,0,488	0/1:19,6:25:99:151,0,300	0/1:23,16:39:99:452,0,392	0/1:21,10:31:99:230,0,419	0/1:34,20:55:99:612,0,582	0/1:29,17:45:99:559,0,429	0/1:19,5:24:99:145,0,348
chr10	75207244	.	AACAGACAG	A	16970.34	PASS	AB=0.793;AC=25;AF=0.446;AN=56;BaseQRankSum=4.853;DP=1042;FS=28.609;HRun=0;HaplotypeScore=359.3267;InbreedingCoeff=-0.8044;MQ=59.60;MQ0=2;MQRankSum=-16.746;QD=17.60;ReadPosRankSum=0.364;VQSLOD=2.5128;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,10:37:17.43:747,0,17	0/1:10,7:17:99:353,0,784	0/0:31,0:26:48.09:0,48,1596	0/0:29,0:27:56.91:0,57,1851	0/1:27,12:39:99:693,0,1627	0/1:26,13:39:99:942,0,1924	0/1:33,6:39:99:496,0,1905	0/1:47,16:63:99:838,0,2283	0/0:18,0:18:45.15:0,45,1857	0/1:31,13:43:99:714,0,110	0/1:17,12:29:24.44:818,0,24	0/1:29,11:40:99:757,0,2534	0/1:30,8:38:99:542,0,2216	0/1:31,10:41:99:777,0,2583	0/1:20,13:33:99:889,0,1188	0/1:26,11:37:99:805,0,106	0/1:33,8:41:99:488,0,2188	0/1:18,4:22:34.56:286,0,35	0/1:25,12:51:99:931,0,1815	0/1:10,11:41:99:778,0,1462	0/1:15,10:43:99:615,0,1913	0/1:23,9:32:99:636,0,1285	0/1:21,7:28:99:343,0,1171	0/1:36,6:42:99:384,0,2114	0/1:19,10:29:25.92:727,0,26	0/1:19,20:66:99:1476,0,3003	0/1:15,10:45:99:772,0,1703	0/1:3,3:27:99:164,0,2037
chr10	75207249	.	ACAG	A	2781.13	PASS	AB=0.935;AC=22;AF=0.393;AN=56;BaseQRankSum=23.954;DP=1041;FS=32.377;HRun=0;HaplotypeScore=308.6960;InbreedingCoeff=-0.6525;MQ=57.56;MQ0=3;MQRankSum=-21.676;QD=3.34;ReadPosRankSum=6.806;VQSLOD=1.2009;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,9:40:99:284,0,116	0/1:18,0:18:40.55:41,0,519	0/0:32,0:25:64.20:0,64,1341	0/0:30,0:28:80.55:0,81,1567	0/1:38,0:38:65.21:65,0,1106	0/1:41,0:41:98.89:99,0,1402	0/1:39,0:39:37.93:38,0,1275	0/0:58,0:58:20.31:0,20,2313	0/0:19,0:19:57.17:0,57,1262	0/1:26,15:41:99:482,0,130	0/1:19,11:30:19.11:255,0,19	0/1:37,0:37:69.41:69,0,1625	0/1:39,0:39:26.61:27,0,1582	0/1:40,0:40:66.36:66,0,1664	0/1:34,0:34:99:101,0,1029	0/1:25,14:39:99:457,0,208	0/1:43,0:43:32.39:32,0,1578	0/1:17,5:22:99:100,0,264	0/1:51,0:50:64.85:65,0,1530	0/1:39,0:39:87.68:88,0,976	0/1:44,0:44:47.52:48,0,1145	0/1:32,0:32:62.45:62,0,1018	0/1:28,0:28:15.66:16,0,970	0/0:40,0:40:7.32:0,7,1544	0/1:20,9:29:99:343,0,131	0/1:66,0:66:99:131,0,2121	0/1:42,0:43:72.90:73,0,1131	0/0:28,0:28:28.88:0,29,1132
chr10	75207548	.	TA	T	13643.18	PASS	AB=0.703;AC=38;AF=0.679;AN=56;BaseQRankSum=2.383;DP=1029;FS=4.616;HRun=9;HaplotypeScore=144.4738;InbreedingCoeff=-0.1758;MQ=64.71;MQ0=0;MQRankSum=-2.087;QD=13.79;ReadPosRankSum=5.568;VQSLOD=3.4934;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:45,23:68:99:421,0,918	0/1:12,9:21:99:162,0,322	0/0:24,1:20:5.15:0,5,236	0/0:15,0:13:17.07:0,17,170	0/1:23,36:59:99:627,0,430	0/1:21,21:42:99:343,0,457	0/1:19,16:35:99:264,0,503	0/1:42,24:67:99:474,0,932	1/1:0,12:12:32.85:257,33,0	0/1:8,15:35:99:296,0,182	0/1:7,12:44:99:272,0,240	1/1:3,25:28:59.91:529,60,0	1/1:2,29:31:71.80:605,72,0	0/1:23,20:43:99:368,0,455	0/1:20,10:30:99:114,0,569	0/1:4,26:44:99:561,0,121	0/1:21,20:41:99:404,0,575	0/1:4,10:29:99:219,0,159	1/1:3,34:37:68.82:878,69,0	1/1:3,50:53:99:1311,147,0	1/1:2,30:32:84.05:769,84,0	1/1:5,38:43:98.74:830,99,0	1/1:4,27:31:74.24:603,74,0	1/1:3,21:24:59.65:517,60,0	0/1:6,9:23:99:186,0,152	1/1:7,34:41:79.61:903,80,0	1/1:4,35:39:99:933,102,0	1/1:6,29:35:87.04:796,87,0
chr10	75207563	.	CCAAAA	C	2812.41	PASS	AB=0.806;AC=7;AF=0.125;AN=56;BaseQRankSum=5.325;DP=1047;FS=1.485;HRun=0;HaplotypeScore=268.5891;InbreedingCoeff=0.1835;MQ=63.00;MQ0=0;MQRankSum=-8.862;QD=17.15;ReadPosRankSum=-0.387;VQSLOD=3.1379;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,166,4142	0/0:19,0:19:48.14:0,48,1214	0/0:20,0:14:36.07:0,36,736	0/0:21,0:19:41.82:0,42,671	0/0:61,0:61:99:0,162,3901	0/0:44,0:44:99:0,114,2824	0/0:36,0:36:90.28:0,90,2386	0/0:62,0:62:99:0,166,4089	1/1:5,7:12:33.10:582,33,0	0/0:40,0:40:99:0,101,2049	0/0:47,0:47:99:0,138,2901	0/1:25,7:32:99:546,0,1088	0/1:23,8:31:99:511,0,1046	0/0:40,0:40:99:0,108,2830	0/0:34,0:34:93.27:0,93,2354	0/0:45,1:46:72.76:0,73,2891	0/0:42,0:42:99:0,111,2896	0/0:32,0:32:93.21:0,93,2018	0/0:50,0:50:99:0,126,2956	0/0:53,0:53:99:0,154,3695	0/0:39,0:39:99:0,99,2308	0/1:27,11:38:99:554,0,1364	0/1:19,9:28:99:573,0,795	0/1:20,3:23:99:183,0,989	0/0:26,0:24:69.11:0,69,1461	0/0:40,0:40:99:0,105,2429	0/0:37,0:36:99:0,102,2479	0/0:33,0:33:99:0,99,2271
chr10	75207898	.	AACAC	A	955.93	PASS	AB=0.945;AC=26;AF=0.542;AN=48;BaseQRankSum=2.541;DP=895;FS=2.817;HRun=0;HaplotypeScore=208.4140;InbreedingCoeff=0.0327;MQ=59.22;MQ0=18;MQRankSum=-2.656;QD=1.67;ReadPosRankSum=0.565;VQSLOD=2.0630;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:48,0:46:0.07:0,0,0	1/1:10,0:10:2.68:11,3,0	./.	./.	0/1:37,0:36:28.22:28,0,28	0/1:32,0:33:29.49:40,0,29	0/0:33,0:33:8.60:0,9,47	./.	1/1:13,9:21:15.04:209,15,0	./.	1/1:24,2:26:8.04:99,8,0	1/1:31,0:31:10.39:108,10,0	1/1:26,4:28:3.01:45,3,0	0/1:17,0:18:10.51:15,0,11	0/0:29,0:37:5.53:0,6,62	0/1:39,0:39:6.25:6,0,44	1/1:35,1:37:26.72:223,27,0	0/1:27,0:28:11.47:29,0,11	0/0:26,0:26:2.54:0,3,28	0/0:21,0:21:11.81:0,12,122	0/0:56,0:55:23.53:0,24,389	0/1:21,0:22:7.64:63,0,8	1/1:24,0:27:0.37:1,0,0	1/1:45,8:51:1.66:84,2,0	0/0:23,0:20:2.92:0,3,17	0/1:34,0:33:26.31:26,0,33	0/1:38,0:38:77.34:77,0,191	0/1:21,0:27:35.04:35,0,193
chr10	75207945	.	A	ACTCTCTCT	1061.38	PASS	AB=0.918;AC=7;AF=0.125;AN=56;BaseQRankSum=4.384;DP=955;FS=3.493;HRun=0;HaplotypeScore=328.8662;InbreedingCoeff=-0.1423;MQ=50.41;MQ0=39;MQRankSum=-6.812;QD=4.82;ReadPosRankSum=-1.039;VQSLOD=1.8433;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:33:16.60:17,0,666	0/0:16,0:16:42.61:0,43,1064	0/0:28,0:12:20.56:0,21,515	0/0:21,0:9:18.02:0,18,316	0/0:46,0:45:87.67:0,88,2059	0/0:41,0:39:48.29:0,48,1775	0/0:31,0:31:62.05:0,62,1466	0/0:47,0:45:99:0,123,2655	0/0:23,0:20:38.49:0,38,811	0/1:29,0:24:99:411,0,739	0/1:27,1:28:47.70:48,0,827	0/0:39,0:38:71.96:0,72,1690	0/0:29,0:27:60.40:0,60,1346	0/0:30,0:27:69.21:0,69,1664	0/0:28,0:27:42.03:0,42,1040	0/1:26,12:38:99:254,0,903	0/0:38,0:38:85.61:0,86,1982	0/1:28,0:25:99:284,0,822	0/0:21,0:21:48.40:0,48,1062	0/0:23,0:23:48.16:0,48,1304	0/0:72,0:70:99:0,116,3444	0/0:24,0:24:42.11:0,42,993	0/0:32,0:29:51.16:0,51,1280	0/0:50,0:45:83.70:0,84,1892	0/1:19,10:26:99:162,0,470	0/0:49,0:45:99:0,105,2689	0/0:46,0:43:88.83:0,89,2314	0/1:28,0:26:15.79:16,0,1246
chr10	75207957	.	A	ACT	10000.17	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=5.744;DP=922;FS=9.685;HRun=0;HaplotypeScore=185.9259;InbreedingCoeff=0.1331;MQ=59.68;MQ0=28;MQRankSum=-2.932;QD=11.70;ReadPosRankSum=4.776;VQSLOD=3.9308;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:31:27.50:225,28,0	0/1:14,0:14:32.45:143,0,32	0/0:39,0:23:54.78:0,55,498	0/0:28,0:15:37.69:0,38,395	0/1:36,0:36:99:168,0,258	0/1:36,0:35:99:205,0,156	0/1:29,0:29:99:131,0,207	0/1:63,0:62:99:568,0,402	1/1:20,0:18:10.57:151,11,0	1/1:31,0:28:37.18:449,37,0	1/1:27,0:27:34.83:333,35,0	1/1:35,0:34:59.38:538,59,0	1/1:27,0:26:52.51:401,53,0	0/1:31,0:28:85.56:311,0,86	0/1:26,0:25:40.20:188,0,40	1/1:38,0:36:53.59:393,54,0	0/1:34,0:34:99:172,0,206	1/1:27,0:24:15.11:309,15,0	1/1:31,0:31:61.39:606,61,0	1/1:20,1:21:5.37:341,5,0	1/1:67,0:66:50.08:879,50,0	1/1:20,0:20:30.85:258,31,0	1/1:24,0:22:47.30:358,47,0	1/1:43,0:39:82:615,82,0	1/1:18,0:18:26.71:211,27,0	1/1:50,0:46:97.46:964,97,0	1/1:44,1:42:76.54:694,77,0	1/1:26,2:26:40.31:388,40,0
chr10	75208184	.	A	AAAAAAAG	17939.80	PASS	AB=0.769;AC=31;AF=0.554;AN=56;BaseQRankSum=-6.854;DP=562;FS=20.813;HRun=0;HaplotypeScore=108.3472;InbreedingCoeff=-0.3742;MQ=66.21;MQ0=0;MQRankSum=-15.328;QD=33.98;ReadPosRankSum=-0.604;VQSLOD=2.9738;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,5:19:30.10:875,30,0	0/1:7,1:8:99:99,0,421	0/0:9,0:9:27.07:0,27,573	0/0:16,0:16:36.58:0,37,763	0/1:20,6:28:99:904,0,797	0/1:21,11:37:99:1275,0,1088	0/1:12,8:23:99:633,0,709	0/1:45,12:64:99:1395,0,2512	0/0:9,0:9:27.08:0,27,594	1/1:1,8:12:36.11:1180,36,0	1/1:4,7:13:27.09:849,27,0	0/1:14,5:21:99:313,0,811	0/1:10,5:15:99:631,0,426	0/1:14,5:19:99:724,0,756	0/1:19,7:29:99:712,0,1070	1/1:2,13:15:29.68:1145,30,0	0/1:19,7:29:99:948,0,1090	1/1:3,12:19:21.07:805,21,0	0/1:22,4:28:99:661,0,1318	0/1:15,8:24:99:931,0,821	0/1:8,4:14:99:348,0,460	0/1:5,1:6:99:105,0,280	0/1:9,7:16:99:682,0,405	0/1:8,3:13:99:213,0,436	1/1:2,11:16:24.08:864,24,0	0/1:20,5:26:99:1006,0,1008	0/1:12,6:21:99:519,0,691	0/1:12,0:12:99:121,0,651
chr10	75208349	.	G	GAT	878.19	PASS	AB=0.846;AC=13;AF=0.241;AN=54;BaseQRankSum=-5.915;DP=341;FS=4.109;HRun=0;HaplotypeScore=73.8655;InbreedingCoeff=0.0271;MQ=64.91;MQ0=2;MQRankSum=1.575;QD=5.74;ReadPosRankSum=0.969;VQSLOD=2.5934;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:0.47:0,0,1	0/0:2,0:2:3.01:0,3,36	./.	0/0:15,1:10:1.77:0,2,6	0/1:17,2:21:45.55:46,0,405	0/0:39,0:39:86.13:0,86,842	0/0:17,0:17:25.65:0,26,138	0/1:30,0:31:0.39:0,0,293	0/1:2,1:3:29.95:42,0,30	0/1:8,3:11:23.61:132,0,24	0/1:3,2:5:0.70:87,0,1	0/0:3,0:3:3.01:0,3,36	0/0:4,0:4:6.02:0,6,72	0/1:3,1:4:38.98:39,0,63	0/0:8,0:9:11.87:0,12,122	1/1:2,1:3:2.61:47,3,0	0/1:21,1:23:21.06:21,0,239	1/1:8,7:15:18.06:288,18,0	0/1:19,1:19:17.96:18,0,281	0/0:8,0:10:14.71:0,15,136	0/0:6,0:6:6.02:0,6,72	0/0:3,0:3:3.01:0,3,36	0/0:4,0:5:5.85:0,6,50	0/0:2,0:2:6.02:0,6,72	0/1:11,6:17:99:301,0,111	0/0:12,0:13:29.92:0,30,338	0/0:18,0:19:35.94:0,36,407	0/0:22,0:24:35.54:0,36,483
chr10	75208415	.	A	AT	2521.01	PASS	AB=0.657;AC=6;AF=0.107;AN=56;BaseQRankSum=-11.001;DP=648;FS=2.822;HRun=4;HaplotypeScore=100.7726;InbreedingCoeff=-0.1210;MQ=73.12;MQ0=0;MQRankSum=2.513;QD=17.27;ReadPosRankSum=1.056;VQSLOD=3.0565;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:32,29:61:99:1009,0,874	0/0:7,0:7:21.06:0,21,238	0/0:10,0:10:24.04:0,24,249	0/0:14,0:14:33.01:0,33,344	0/0:25,0:25:75.21:0,75,850	0/0:29,0:29:78.12:0,78,857	0/0:30,0:30:81.23:0,81,919	0/0:34,0:34:90.24:0,90,1012	0/0:7,0:7:21.06:0,21,238	0/1:7,8:15:99:283,0,193	0/1:2,6:8:43.92:222,0,44	0/0:28,0:28:84.24:0,84,953	0/0:14,0:14:39.11:0,39,442	0/0:24,0:24:69.20:0,69,782	0/0:22,0:22:63.09:0,63,714	0/1:10,5:14:99:204,0,199	0/0:41,0:41:99:0,114,1293	0/1:8,15:23:99:545,0,172	0/0:24,0:24:66.18:0,66,740	0/0:18,0:18:51.14:0,51,578	0/0:36,0:36:99:0,99,1123	0/0:9,0:9:27.08:0,27,306	0/0:25,0:25:72.21:0,72,816	0/0:32,0:32:93.27:0,93,1055	0/1:13,11:24:99:382,0,339	0/0:18,1:19:16.11:0,16,571	0/0:21,0:21:60.17:0,60,681	0/0:33,0:33:99:0,99,1111
chr10	75208841	.	GAA	G	7557.71	PASS	AB=0.717;AC=25;AF=0.446;AN=56;BaseQRankSum=6.128;DP=948;FS=2.200;HRun=12;HaplotypeScore=129.5421;InbreedingCoeff=-0.8133;MQ=63.08;MQ0=2;MQRankSum=-4.202;QD=8.39;ReadPosRankSum=5.884;VQSLOD=2.2878;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,30:65:99:677,0,1112	0/1:5,4:9:98:98,0,116	0/0:12,1:13:9.21:0,9,219	0/0:14,0:13:22.46:0,22,314	0/1:19,11:32:99:222,0,554	0/1:24,7:32:99:199,0,577	0/1:19,26:47:99:535,0,390	0/1:30,30:60:99:748,0,588	0/0:7,0:17:23.49:0,23,201	0/1:23,10:34:99:220,0,556	0/1:15,4:21:99:118,0,322	0/1:15,12:33:99:177,0,298	0/1:7,20:37:99:425,0,288	0/1:24,16:39:99:352,0,747	0/1:32,22:55:99:417,0,941	0/1:21,17:39:99:420,0,540	0/1:25,23:49:99:476,0,851	0/1:20,9:27:99:120,0,550	0/1:22,12:36:99:290,0,450	0/1:10,8:18:99:168,0,275	0/1:20,12:34:99:166,0,694	0/1:12,5:23:99:137,0,200	0/1:4,13:20:99:257,0,119	0/1:12,25:55:99:464,0,417	0/1:19,14:34:99:260,0,532	0/1:40,17:60:99:314,0,979	0/1:16,13:30:99:260,0,458	0/1:7,2:9:38.39:38,0,205
chr10	75209192	.	GAA	G	8138.28	PASS	AB=0.722;AC=24;AF=0.429;AN=56;BaseQRankSum=-3.626;DP=1024;FS=2.563;HRun=10;HaplotypeScore=174.8037;InbreedingCoeff=-0.6316;MQ=68.95;MQ0=11;MQRankSum=-1.954;QD=10.00;ReadPosRankSum=7.428;VQSLOD=0.9472;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:39,26:65:99:1328,118,0	0/1:13,6:19:61.22:61,0,403	0/0:64,0:26:48.34:0,48,546	0/0:52,0:29:42.46:0,42,434	0/1:31,19:51:99:488,0,938	0/0:32,0:32:84.34:0,84,1051	0/0:43,0:44:46.14:0,46,1072	0/1:17,0:25:99:107,0,233	0/0:16,1:17:0.32:0,0,365	0/1:25,16:41:99:433,0,628	0/1:11,14:25:99:283,0,198	0/1:23,16:38:99:394,0,560	0/1:24,24:49:99:604,0,610	0/1:22,23:43:99:690,0,483	0/1:18,21:38:99:500,0,658	0/1:11,11:22:99:273,0,305	0/1:26,21:49:99:533,0,711	0/1:33,14:47:99:402,0,812	0/1:27,1:36:99:179,0,472	0/1:20,0:22:94.64:95,0,320	0/1:23,0:31:99:162,0,439	0/1:15,6:21:99:127,0,323	0/1:17,14:31:99:357,0,385	0/1:16,20:37:99:506,0,373	0/1:23,13:36:99:278,0,608	0/1:19,0:34:99:192,0,439	0/1:15,0:33:99:111,0,515	0/1:10,0:14:37.91:38,0,184
chr10	75209202	.	A	AG	6574.05	PASS	AB=0.829;AC=27;AF=0.482;AN=56;BaseQRankSum=-11.008;DP=1068;FS=7.146;HRun=9;HaplotypeScore=184.7994;InbreedingCoeff=-0.0424;MQ=67.00;MQ0=10;MQRankSum=2.160;QD=8.54;ReadPosRankSum=-7.219;VQSLOD=-0.4625;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:65,0:67:99:132,0,337	0/0:19,0:19:6.25:0,6,233	0/0:61,1:24:10.20:0,10,112	0/1:44,2:26:5.36:5,0,60	0/0:56,0:54:99:0,110,853	0/0:34,0:34:31.42:0,31,273	0/1:42,0:43:0.30:0,0,362	0/1:32,0:37:61.72:290,0,62	0/1:4,9:15:15.03:192,0,15	0/1:36,6:43:99:170,0,258	0/1:26,2:28:99:124,0,172	0/1:30,10:39:99:414,0,160	0/1:40,11:51:99:372,0,240	0/0:42,0:41:99:0,108,710	0/0:38,0:37:94.21:0,94,649	0/1:18,6:24:99:204,0,140	0/0:47,0:47:99:0,108,763	0/1:30,17:47:99:527,0,157	1/1:26,10:37:86.18:721,86,0	1/1:13,12:25:26.82:234,27,0	1/1:24,10:34:66.67:546,67,0	0/1:16,11:27:37.36:163,0,37	0/1:27,9:36:99:288,0,136	0/1:28,10:38:99:361,0,242	0/1:29,7:37:94.96:390,0,95	1/1:32,5:37:81:642,81,0	1/1:29,7:36:18.82:477,19,0	1/1:15,4:20:33.36:320,33,0
chr10	75209424	.	C	CGCCT	26130.80	PASS	AB=0.741;AC=26;AF=0.464;AN=56;BaseQRankSum=10.733;DP=1107;FS=0.000;HRun=0;HaplotypeScore=226.2373;InbreedingCoeff=-0.8616;MQ=69.15;MQ0=0;MQRankSum=-17.222;QD=24.51;ReadPosRankSum=0.541;VQSLOD=4.1936;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:39,19:63:99:1179,0,1555	0/1:9,4:13:99:207,0,383	0/0:22,0:22:59.80:0,60,930	0/0:19,0:19:50.73:0,51,801	0/1:26,10:37:99:636,0,916	0/1:22,18:41:99:1180,0,818	0/1:37,23:62:99:1886,0,1242	0/1:40,13:53:99:1056,0,1198	0/1:23,1:24:10.55:11,0,1096	0/1:26,15:42:99:1272,0,1105	0/1:26,8:36:99:238,0,1194	0/1:29,17:47:99:1301,0,1214	0/1:23,20:43:99:1440,0,862	0/1:18,12:30:99:905,0,854	0/1:21,22:46:99:1548,0,767	0/1:26,14:41:99:1294,0,944	0/1:33,34:66:99:2393,0,1422	0/1:25,19:47:99:1376,0,1170	0/1:24,8:33:99:811,0,911	0/1:16,4:21:99:138,0,573	0/1:32,31:67:99:1467,0,1211	0/1:19,11:33:99:869,0,590	0/1:23,9:36:99:457,0,880	0/1:34,21:56:99:1304,0,1363	0/1:20,8:28:99:336,0,832	0/1:30,17:50:99:1550,0,1131	0/1:18,15:33:99:1239,0,690	0/1:13,1:14:40.87:41,0,623
chr10	75210326	.	A	AAC	30070.96	PASS	AB=0.675;AC=25;AF=0.446;AN=56;BaseQRankSum=-4.883;DP=1432;FS=1.317;HRun=0;HaplotypeScore=199.3223;InbreedingCoeff=-0.8065;MQ=78.08;MQ0=0;MQRankSum=-3.303;QD=22.32;ReadPosRankSum=3.549;VQSLOD=5.4654;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:48,60:108:99:2527,0,1589	0/1:8,13:21:99:670,0,249	0/0:29,0:29:78.26:0,78,1117	0/0:34,0:34:93.31:0,93,1365	0/1:22,28:51:99:1319,0,785	0/1:22,18:40:99:838,0,853	0/1:39,28:67:99:1224,0,1366	0/1:41,28:68:99:1434,0,1239	0/0:22,0:22:63.21:0,63,928	0/1:27,16:43:99:861,0,934	0/1:19,22:41:99:1015,0,608	0/1:33,18:52:99:795,0,999	0/1:21,33:54:99:1646,0,643	0/1:24,21:46:99:1050,0,841	0/1:27,33:61:99:1563,0,792	0/1:28,21:49:99:938,0,908	0/1:40,29:69:99:1301,0,1481	0/1:15,25:40:99:1240,0,422	0/1:24,14:40:99:692,0,856	0/1:37,28:65:99:1390,0,1253	0/1:42,49:91:99:2273,0,1470	0/1:15,20:35:99:702,0,533	0/1:27,20:47:99:885,0,933	0/1:34,31:65:99:1496,0,1266	0/1:30,25:57:99:1179,0,976	0/1:26,28:54:99:1407,0,845	0/1:39,27:66:99:1225,0,1256	0/1:8,8:15:99:401,0,305
chr10	75210400	.	CGGTCCT	C	6920.65	PASS	AB=0.763;AC=6;AF=0.107;AN=56;BaseQRankSum=-0.007;DP=1324;FS=1.355;HRun=0;HaplotypeScore=419.3275;InbreedingCoeff=-0.1200;MQ=77.13;MQ0=0;MQRankSum=-11.694;QD=21.76;ReadPosRankSum=-6.932;VQSLOD=2.7100;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:61,17:78:99:1052,0,2873	0/0:31,0:31:69.05:0,69,2484	0/0:29,0:29:84.25:0,84,2409	0/0:30,0:31:87.81:0,88,2095	0/0:50,0:50:99:0,142,4275	0/0:64,0:64:99:0,162,5701	0/0:47,0:47:61.24:0,61,3458	0/0:46,0:46:75.37:0,75,3210	0/0:22,0:22:41.23:0,41,2257	0/1:35,17:52:99:1372,0,1801	0/1:22,15:37:99:1037,0,1195	0/0:53,0:53:99:0,120,4295	0/0:55,0:55:56.32:0,56,4003	0/0:48,0:48:99:0,110,3748	0/0:43,0:43:92.09:0,92,3274	0/1:32,19:51:99:1302,0,2140	0/0:56,0:56:99:0,123,4238	0/1:28,8:36:99:393,0,1615	0/0:41,0:41:74.33:0,74,2749	0/0:53,0:53:82.17:0,82,4098	0/0:68,0:68:99:0,181,5985	0/0:43,0:43:98.44:0,98,3556	0/0:43,0:43:96.41:0,96,3495	0/0:55,0:54:99:0,110,4374	0/1:42,22:64:99:1765,0,1908	0/0:42,0:42:77.43:0,77,3399	0/0:58,0:58:99:0,116,4773	0/0:28,0:28:81.08:0,81,2374
chr10	75211050	.	CAG	C	18444.85	PASS	AB=0.688;AC=25;AF=0.446;AN=56;BaseQRankSum=28.846;DP=1459;FS=1.602;HRun=0;HaplotypeScore=243.4990;InbreedingCoeff=-0.8065;MQ=74.52;MQ0=2;MQRankSum=-10.804;QD=13.56;ReadPosRankSum=4.885;VQSLOD=4.5026;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:52,54:107:99:1652,0,2123	0/1:5,9:14:99:293,0,177	0/0:34,0:33:61.76:0,62,1190	0/0:29,0:28:78.09:0,78,1190	0/1:21,19:40:99:595,0,733	0/1:30,24:54:99:721,0,1199	0/1:45,32:77:99:796,0,1880	0/1:39,28:67:99:872,0,1294	0/0:36,0:36:99:0,102,1767	0/1:33,32:65:99:1077,0,1209	0/1:11,9:20:99:277,0,390	0/1:28,23:51:99:647,0,1175	0/1:33,34:67:99:1049,0,1419	0/1:45,30:75:99:910,0,1876	0/1:31,22:53:99:676,0,1317	0/1:28,17:45:99:462,0,1145	0/1:40,25:65:99:802,0,1781	0/1:25,22:47:99:621,0,1024	0/1:30,18:48:99:593,0,1095	0/1:15,20:35:99:647,0,598	0/1:54,42:96:99:1033,0,2398	0/1:23,16:39:99:544,0,1051	0/1:14,23:37:99:764,0,499	0/1:45,42:87:99:1099,0,1912	0/1:18,26:44:99:747,0,688	0/1:33,22:55:99:733,0,1262	0/1:23,19:41:99:591,0,886	0/1:21,8:29:99:242,0,1029
chr10	75211887	.	TA	T	653.64	PASS	AB=0.836;AC=18;AF=0.333;AN=54;BaseQRankSum=-0.150;DP=355;FS=6.683;HRun=9;HaplotypeScore=57.5331;InbreedingCoeff=0.3937;MQ=74.22;MQ0=15;MQRankSum=0.539;QD=5.68;ReadPosRankSum=1.186;VQSLOD=0.4320;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:41.08:0,41,265	0/1:4,1:5:18.33:18,0,42	0/0:45,0:20:14.41:0,14,181	0/0:21,0:9:13.33:0,13,106	0/0:10,0:10:27.02:0,27,264	0/0:11,0:11:27.03:0,27,272	0/0:14,0:14:38.82:0,39,383	0/0:13,0:13:17.05:0,17,154	0/1:1,6:7:5.11:46,0,5	0/0:2,0:8:20.32:0,20,114	0/0:9,0:11:14.64:0,15,88	0/1:4,5:9:10.15:41,0,10	1/1:6,1:7:1.28:32,1,0	0/0:8,0:8:17.99:0,18,174	0/0:13,0:14:26.77:0,27,241	0/0:2,0:8:14.31:0,14,75	0/0:19,0:18:45.08:0,45,485	0/0:7,0:12:17.21:0,17,106	0/1:11,0:11:1.66:99,0,2	0/1:5,0:5:24.31:24,0,31	1/1:10,1:11:1.99:67,2,0	1/1:1,6:6:2.99:27,3,0	1/1:3,4:7:9:82,9,0	1/1:2,13:15:27.01:247,27,0	0/0:9,0:9:17.55:0,18,105	0/1:21,0:21:22.17:93,0,22	1/1:9,1:10:2:44,2,0	./.
chr10	75211896	.	A	AAG	629.98	PASS	AB=0.991;AC=13;AF=0.232;AN=56;BaseQRankSum=-0.089;DP=347;FS=6.072;HRun=0;HaplotypeScore=62.8126;InbreedingCoeff=0.2393;MQ=67.28;MQ0=21;MQRankSum=-2.754;QD=5.58;ReadPosRankSum=-1.264;VQSLOD=1.4964;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,5:18:41.25:398,41,0	0/0:5,0:5:14.86:0,15,106	0/0:42,0:16:11.25:0,11,150	0/0:20,0:9:14.39:0,14,89	0/0:12,0:12:23.83:0,24,225	0/0:11,0:11:24.88:0,25,294	0/0:15,0:13:29.73:0,30,392	0/0:13,0:13:11.79:0,12,166	0/0:10,0:10:8.69:0,9,59	0/1:8,0:8:24.75:81,0,25	1/1:11,0:10:7.23:51,7,0	0/0:7,0:7:2.73:0,3,28	0/1:7,0:7:0.75:1,0,22	0/0:8,0:8:11.89:0,12,164	0/1:14,0:14:13.10:13,0,214	0/1:8,0:7:1.67:62,0,2	0/0:19,0:18:50.79:0,51,596	0/1:14,0:9:29.78:88,0,30	0/1:13,0:11:12.98:13,0,43	0/0:7,0:7:11.09:0,11,57	0/0:10,0:9:15.69:0,16,66	0/0:9,0:8:2.49:0,2,21	0/0:9,0:9:16.97:0,17,103	0/0:16,0:15:19.62:0,20,209	0/1:14,0:14:29.93:56,0,30	0/0:12,0:12:28.95:0,29,127	0/0:6,0:7:8.31:0,8,41	1/1:2,0:3:2.97:20,3,0
chr10	75211976	.	CG	C	1000.91	PASS	AB=0.571;AC=35;AF=0.648;AN=54;BaseQRankSum=5.736;DP=248;FS=11.998;HRun=3;HaplotypeScore=26.9884;InbreedingCoeff=0.7045;MQ=32.09;MQ0=39;MQRankSum=-4.071;QD=8.63;ReadPosRankSum=0.295;VQSLOD=-0.5969;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:11:17.79:70,18,0	0/0:4,0:4:12.01:0,12,147	./.	0/0:6,0:1:2.37:0,2,8	0/0:17,0:14:17.95:0,18,208	0/0:15,0:14:35.83:0,36,422	0/0:14,0:9:11.06:0,11,205	0/0:14,0:11:33.10:0,33,452	1/1:4,4:7:12.04:146,12,0	1/1:2,0:2:5.88:36,6,0	1/1:5,0:5:5.33:27,5,0	1/1:1,2:3:3.01:36,3,0	1/1:1,3:3:9.03:110,9,0	0/0:12,0:12:29.84:0,30,356	0/0:16,0:15:28.52:0,29,305	1/1:4,0:4:5.33:28,5,0	0/0:23,0:22:51.04:0,51,610	1/1:6,0:2:5.33:27,5,0	1/1:8,4:8:6.54:127,7,0	0/1:1,3:3:0:1,0,0	1/1:4,2:2:3.01:36,3,0	1/1:2,4:6:6.02:71,6,0	1/1:5,3:8:10.32:93,10,0	1/1:3,2:3:5.98:56,6,0	1/1:6,0:9:11.24:65,11,0	1/1:1,5:5:12.04:144,12,0	1/1:1,3:4:3.01:36,3,0	1/1:3,2:3:8.96:78,9,0
chr10	75211977	.	GGGAA	G	883.68	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=2.088;DP=243;FS=6.384;HRun=0;HaplotypeScore=36.2288;InbreedingCoeff=0.6865;MQ=32.15;MQ0=37;MQRankSum=-2.104;QD=23.25;ReadPosRankSum=-0.801;VQSLOD=1.7983;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,9:10:21.06:431,21,0	0/0:4,0:4:12.04:0,12,296	./.	0/0:7,0:1:2.37:0,2,8	0/0:18,0:15:26.97:0,27,524	0/0:16,0:15:42.14:0,42,1038	0/0:14,0:9:23.99:0,24,519	0/0:15,0:12:39.13:0,39,1048	0/0:9,0:7:15.05:0,15,186	1/1:2,1:2:6.02:96,6,0	1/1:3,1:3:6.02:101,6,0	0/0:2,0:2:3.01:0,3,36	0/0:4,0:3:9.03:0,9,109	0/0:13,0:13:33.11:0,33,879	0/0:14,0:13:33.10:0,33,690	1/1:2,3:4:6.02:103,6,0	0/0:22,0:21:51.17:0,51,1332	1/1:4,1:2:6.02:101,6,0	0/0:10,0:8:18.01:0,18,228	0/0:5,0:4:4.39:0,4,46	0/0:7,0:3:3.01:0,3,37	0/0:6,0:6:8.99:0,9,92	0/0:8,0:8:17.78:0,18,148	0/0:5,0:3:9.02:0,9,101	1/1:3,5:8:15.04:210,15,0	0/0:6,0:5:12.01:0,12,124	0/0:4,0:4:2.99:0,3,24	0/0:5,0:3:4.92:0,5,53
chr10	75212143	.	A	AACACACGCACGCACGCACGCAC	4601.43	PASS	AB=0.949;AC=25;AF=0.481;AN=52;BaseQRankSum=8.140;DP=399;FS=3.904;HRun=0;HaplotypeScore=227.4610;InbreedingCoeff=0.6241;MQ=84.89;MQ0=1;MQRankSum=-7.403;QD=38.03;ReadPosRankSum=2.222;VQSLOD=3.6278;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:16:11.51:827,12,0	0/0:4,0:4:9.03:0,9,368	0/0:40,0:35:64.10:0,64,2572	0/0:27,0:26:65.99:0,66,2016	0/0:13,0:13:39.13:0,39,1826	0/0:14,0:14:27.09:0,27,1172	0/0:22,0:22:38.86:0,39,2520	0/0:36,0:36:86:0,86,2429	1/1:9,0:9:9.03:778,9,0	1/1:5,0:5:9:386,9,0	./.	1/1:6,0:6:6.02:101,6,0	1/1:8,0:8:3.01:269,3,0	0/0:22,0:22:66.18:0,66,2883	0/0:19,0:19:48.13:0,48,2287	0/0:10,0:10:7.18:0,7,46	0/0:30,0:30:87.28:0,87,4281	0/1:19,0:19:50.07:1602,0,50	0/1:9,0:9:14.17:42,0,14	./.	0/0:8,0:33:7.22:0,7,48	1/1:3,0:3:6.02:117,6,0	1/1:4,0:4:3.01:49,3,0	1/1:4,3:12:5.05:279,5,0	0/1:10,0:10:0.06:0,0,0	1/1:2,0:8:17.28:98,17,0	1/1:0,0:7:7.64:38,8,0	1/1:0,0:3:2.92:17,3,0
chr10	75212148	.	A	ACGCACGCACGCACGCACGCACGCACG	15912.94	PASS	AB=1.000;AC=30;AF=0.577;AN=52;BaseQRankSum=8.634;DP=483;FS=4.942;HRun=0;HaplotypeScore=304.2390;InbreedingCoeff=0.7140;MQ=78.26;MQ0=1;MQRankSum=-10.865;QD=66.30;ReadPosRankSum=2.683;VQSLOD=3.2071;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:11.51:846,12,0	0/0:3,0:3:9.03:0,9,412	0/0:39,0:35:90.49:0,90,3496	0/0:29,0:28:71.98:0,72,2445	0/0:13,0:13:39.13:0,39,2132	0/0:14,0:14:33.10:0,33,1500	0/0:22,0:22:54.17:0,54,3036	0/0:34,0:34:90.75:0,91,3267	1/1:0,3:17:9.03:1101,9,0	1/1:4,0:4:9.03:530,9,0	./.	1/1:17,0:17:21.07:1891,21,0	1/1:2,1:18:5.81:379,6,0	0/0:23,0:23:66.21:0,66,3577	0/0:20,0:20:54.13:0,54,2776	0/1:11,0:11:13.53:14,0,57	0/0:33,0:33:96.25:0,96,5161	1/1:21,0:21:12.35:2236,12,0	1/1:21,0:19:19.03:1921,19,0	./.	0/1:41,0:41:31.29:166,0,31	1/1:5,0:5:9.03:460,9,0	1/1:3,0:3:3.01:49,3,0	1/1:11,0:12:14.92:772,15,0	1/1:8,0:8:2.21:16,2,0	1/1:19,0:19:39.89:2138,40,0	1/1:16,0:16:42.04:2890,42,0	1/1:4,0:4:6.02:504,6,0
chr10	75212152	.	G	GCA	1107.55	PASS	AB=0.900;AC=22;AF=0.423;AN=52;BaseQRankSum=8.180;DP=476;FS=2.030;HRun=0;HaplotypeScore=99.1356;InbreedingCoeff=0.4740;MQ=76.86;MQ0=1;MQRankSum=-8.185;QD=6.88;ReadPosRankSum=2.702;VQSLOD=3.4667;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:8,11:24:35.87:134,0,36	0/0:3,0:3:9.03:0,9,136	0/0:41,0:36:99:0,101,1349	0/0:27,0:26:66:0,66,926	0/0:13,0:13:39.05:0,39,566	0/0:12,0:12:33.11:0,33,499	0/0:22,0:22:54.18:0,54,822	0/0:34,0:34:93.13:0,93,1320	1/1:13,0:13:7.11:25,7,0	1/1:5,0:5:12.03:137,12,0	./.	0/0:18,0:18:6.26:0,6,107	1/1:11,0:11:2.37:8,2,0	0/0:24,0:24:69.18:0,69,1003	0/0:21,0:21:57.15:0,57,801	1/1:9,0:9:3.48:43,3,0	0/0:34,0:34:99:0,102,1470	1/1:21,0:21:27.68:348,28,0	0/1:21,0:19:50.36:50,0,410	./.	0/0:40,0:40:7.89:0,8,85	1/1:5,0:5:4.91:21,5,0	1/1:2,0:3:2.37:8,2,0	0/0:14,1:15:12.77:0,13,144	1/1:8,0:8:2.70:37,3,0	0/1:20,0:20:99:248,0,287	0/1:17,0:17:99:151,0,246	1/1:4,0:4:5.98:71,6,0
chr10	75213708	.	TA	T	6560.13	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=11.337;DP=425;FS=8.157;HRun=8;HaplotypeScore=46.2708;InbreedingCoeff=0.9771;MQ=66.56;MQ0=1;MQRankSum=-0.194;QD=24.48;ReadPosRankSum=0.358;VQSLOD=5.2408;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:81.13:782,81,0	0/0:7,0:7:21.06:0,21,254	0/0:10,0:9:24.07:0,24,283	0/0:6,0:5:12.04:0,12,142	0/0:20,0:20:57.17:0,57,688	0/0:15,0:15:45.14:0,45,542	0/0:10,0:10:24.07:0,24,290	0/0:40,0:40:99:0,111,1310	1/1:0,6:6:15.02:145,15,0	1/1:2,17:19:51.05:481,51,0	1/1:1,11:12:33.05:319,33,0	1/1:0,10:9:18.03:174,18,0	1/1:1,10:11:29.94:290,30,0	0/0:10,0:10:24.07:0,24,290	0/0:21,0:21:63.19:0,63,761	1/1:0,15:15:42:394,42,0	0/0:18,0:18:54.15:0,54,640	1/1:2,35:33:81.13:782,81,0	1/1:1,13:13:33:306,33,0	1/1:1,7:8:21.03:203,21,0	1/1:0,8:8:24.04:232,24,0	1/1:0,3:3:9.01:87,9,0	1/1:0,6:6:18.03:174,18,0	1/1:1,5:6:15.02:145,15,0	1/1:1,17:18:48.08:464,48,0	1/1:3,16:18:45.05:425,45,0	1/1:1,23:24:60.10:579,60,0	1/1:1,20:21:60.10:579,60,0
chr10	75216718	.	T	TA	6273.49	PASS	AB=0.929;AC=13;AF=0.232;AN=56;BaseQRankSum=16.651;DP=724;FS=8.069;HRun=1;HaplotypeScore=80.9076;InbreedingCoeff=0.9056;MQ=88.38;MQ0=0;MQRankSum=-6.066;QD=38.02;ReadPosRankSum=3.378;VQSLOD=5.3161;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,1682	0/0:15,0:15:42.14:0,42,545	0/0:23,0:23:57.25:0,57,819	0/0:29,0:29:72.10:0,72,870	0/0:21,0:21:60.16:0,60,748	0/0:21,0:21:60.16:0,60,748	0/0:28,0:28:78.24:0,78,989	0/0:28,0:28:81.25:0,81,1039	1/1:0,20:20:57.19:853,57,0	0/0:23,0:23:60.19:0,60,778	0/0:19,0:19:54.15:0,54,673	1/1:1,28:29:75.25:1124,75,0	1/1:0,27:27:75.25:1124,75,0	0/0:25,0:25:75.23:0,75,959	0/0:41,0:41:99:0,123,1567	0/1:12,1:13:11.85:12,0,356	0/0:38,0:38:99:0,111,1437	0/0:27,0:27:75.24:0,75,974	0/0:14,0:14:39.13:0,39,507	0/0:19,0:19:57.19:0,57,740	0/0:38,0:38:99:0,105,1363	1/1:2,27:29:75.12:1093,75,0	1/1:0,20:20:60.20:899,60,0	1/1:0,27:27:78.26:1169,78,0	0/0:21,0:21:60.19:0,60,779	0/0:38,0:38:99:0,111,1441	0/0:26,0:26:72.23:0,72,927	0/0:21,0:21:63.20:0,63,817
chr10	75219246	.	C	CAACA	3684.09	PASS	AB=0.889;AC=15;AF=0.268;AN=56;BaseQRankSum=-4.814;DP=284;FS=2.729;HRun=0;HaplotypeScore=52.9131;InbreedingCoeff=0.8285;MQ=79.86;MQ0=1;MQRankSum=-5.390;QD=43.34;ReadPosRankSum=3.640;VQSLOD=3.4904;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:23:48.08:1151,48,0	0/0:2,0:2:3.01:0,3,55	0/0:17,0:13:33.04:0,33,507	0/0:25,0:23:16.70:0,17,634	0/0:9,0:9:24.07:0,24,388	0/0:4,0:4:9.03:0,9,164	0/0:9,0:9:24.08:0,24,419	0/0:14,0:14:30.10:0,30,502	1/1:1,7:8:21.07:544,21,0	0/0:9,0:9:21.06:0,21,354	0/0:11,0:11:30.08:0,30,482	1/1:1,6:8:24.07:535,24,0	1/1:0,8:9:15.05:334,15,0	0/0:12,0:12:33.11:0,33,587	0/0:6,0:6:15.05:0,15,273	0/1:7,1:8:56.97:57,0,306	0/0:12,0:13:33.11:0,33,595	0/0:11,0:11:33.11:0,33,580	0/0:8,0:8:21.07:0,21,382	0/0:5,0:5:12.04:0,12,218	0/0:15,0:14:39.08:0,39,629	1/1:2,5:7:6.02:156,6,0	1/1:1,7:9:23.99:517,24,0	1/1:1,11:13:15.04:390,15,0	0/0:8,0:8:21.07:0,21,382	0/0:7,0:7:18.06:0,18,325	0/0:8,0:8:18.05:0,18,299	0/0:6,0:6:18.06:0,18,327
chr10	75222349	.	GGGT	G	5093.66	PASS	AB=0.955;AC=15;AF=0.268;AN=56;BaseQRankSum=12.310;DP=675;FS=9.627;HRun=0;HaplotypeScore=101.1738;InbreedingCoeff=0.9050;MQ=71.17;MQ0=0;MQRankSum=-2.398;QD=25.22;ReadPosRankSum=2.770;VQSLOD=4.4572;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,20:40:57.19:824,57,0	0/0:14,0:14:27.07:0,27,504	0/0:23,0:23:13.14:0,13,469	0/0:22,0:20:33.03:0,33,591	0/0:16,0:16:21.07:0,21,413	0/0:26,0:26:39.13:0,39,786	0/0:26,1:27:11.16:0,11,946	0/1:20,1:21:1.25:1,0,693	1/1:6,18:24:51.17:737,51,0	0/0:27,0:27:54.18:0,54,1063	0/0:11,0:11:9.03:0,9,184	1/1:6,25:31:60.20:868,60,0	1/1:7,16:23:51.17:737,51,0	0/0:23,1:24:10.81:0,11,990	0/0:23,0:23:51.18:0,51,1038	0/0:30,0:30:72.25:0,72,1468	0/0:24,1:25:20.52:0,21,1046	0/0:38,0:38:84.24:0,84,1642	0/0:25,1:26:7.73:0,8,861	0/0:21,0:21:42.13:0,42,811	0/0:40,0:40:84.29:0,84,1670	1/1:8,21:29:60.11:799,60,0	1/1:2,9:11:24.08:347,24,0	1/1:3,20:23:54.18:781,54,0	0/0:16,0:16:30.10:0,30,596	0/0:27,0:27:54.02:0,54,1057	0/0:16,0:15:39.10:0,39,703	0/0:21,0:21:42.14:0,42,859
chr10	75224034	.	AC	A	5986.37	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.787;DP=794;FS=1.020;HRun=3;HaplotypeScore=82.5850;InbreedingCoeff=0.9998;MQ=87.69;MQ0=0;MQRankSum=-2.659;QD=33.82;ReadPosRankSum=1.910;VQSLOD=5.3910;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,1853	0/0:12,0:12:36.12:0,36,516	0/0:30,0:30:81.22:0,81,1052	0/0:24,0:24:53.75:0,54,772	0/0:34,0:34:99:0,102,1418	0/0:22,0:22:63.20:0,63,889	0/0:29,0:29:87.28:0,87,1232	0/0:35,0:35:99:0,102,1398	1/1:0,25:25:72.23:893,72,0	0/0:36,0:36:99:0,102,1451	0/0:28,0:28:84.25:0,84,1169	1/1:1,24:25:63.20:781,63,0	1/1:0,27:27:78.25:967,78,0	0/0:27,0:27:81.21:0,81,1109	0/0:28,0:28:84.28:0,84,1210	0/0:27,0:27:78.23:0,78,1064	0/0:40,0:40:99:0,114,1640	0/0:21,0:21:63.21:0,63,904	0/0:24,0:24:69.22:0,69,966	0/0:39,0:39:99:0,117,1625	0/0:28,0:28:84.28:0,84,1205	1/1:0,37:37:99:1264,102,0	1/1:1,21:22:53.88:669,54,0	1/1:1,40:41:99:1413,114,0	0/0:17,0:17:51.15:0,51,699	0/0:26,0:26:75.25:0,75,1079	0/0:35,0:35:99:0,105,1492	0/0:9,0:9:27.06:0,27,350
chr10	75225230	.	CTG	C	5894.13	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.643;DP=967;FS=20.994;HRun=0;HaplotypeScore=140.7698;InbreedingCoeff=0.9999;MQ=69.27;MQ0=2;MQRankSum=-4.240;QD=33.30;ReadPosRankSum=4.245;VQSLOD=5.0842;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,117,2046	0/0:12,0:12:36.12:0,36,639	0/0:53,0:43:99:0,105,1703	0/0:50,0:45:99:0,103,1684	0/0:25,0:25:72.25:0,72,1277	0/0:29,0:29:84.29:0,84,1490	0/0:30,0:30:81.26:0,81,1402	0/0:52,0:52:99:0,134,2295	1/1:1,28:29:72.24:989,72,0	0/0:46,0:46:99:0,123,2157	0/0:21,0:21:57.18:0,57,975	1/1:0,29:29:69.23:948,69,0	1/1:0,22:22:63.21:866,63,0	0/0:19,0:19:57.20:0,57,1010	0/0:55,0:55:99:0,159,2719	0/0:32,0:31:93.30:0,93,1621	0/0:41,0:41:99:0,108,1859	0/0:20,0:20:48.99:0,49,883	0/0:37,0:37:99:0,102,1767	0/0:34,0:34:99:0,99,1749	0/0:84,0:84:99:0,229,3970	1/1:2,27:29:63.21:866,63,0	1/1:2,29:31:75.25:1030,75,0	1/1:3,34:37:87.29:1195,87,0	0/0:26,0:26:69.24:0,69,1225	0/0:37,0:37:99:0,105,1807	0/0:28,0:28:81.26:0,81,1409	0/0:12,0:12:33.10:0,33,557
chr10	75227050	.	AAC	A	217.50	PASS	AB=0.962;AC=22;AF=0.733;AN=30;BaseQRankSum=3.337;DP=535;FS=7.347;HRun=0;HaplotypeScore=74.2437;InbreedingCoeff=0.2854;MQ=79.16;MQ0=22;MQRankSum=-1.194;QD=0.97;ReadPosRankSum=1.745;VQSLOD=0.5940;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:8,0:10:2.84:14,3,0	./.	./.	1/1:19,0:18:3:31,3,0	0/1:22,2:23:25.09:25,0,37	./.	./.	./.	0/0:17,0:17:3:0,3,28	0/0:10,0:9:9:0,9,93	./.	1/1:17,0:14:5.68:28,6,0	1/1:14,0:13:2.84:14,3,0	1/1:26,0:25:3:31,3,0	./.	1/1:26,4:29:10.43:122,10,0	./.	./.	./.	0/1:31,0:30:0:0,0,0	./.	1/1:20,0:19:2.80:13,3,0	./.	0/0:12,0:12:3.01:0,3,41	1/1:20,0:18:0.47:1,0,0	1/1:7,0:9:5.68:28,6,0	1/1:3,0:3:2.84:14,3,0
chr10	75227098	.	CACACACACACACACCT	C	375.79	PASS	AB=0.600;AC=9;AF=0.161;AN=56;BaseQRankSum=5.834;DP=575;FS=8.134;HRun=0;HaplotypeScore=186.1578;InbreedingCoeff=0.5839;MQ=54.04;MQ0=50;MQRankSum=-2.302;QD=3.21;ReadPosRankSum=-1.878;VQSLOD=1.6002;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:17:5.59:71,6,0	0/0:11,0:11:21.07:0,21,837	0/0:14,0:8:12.08:0,12,375	0/0:18,0:11:9.05:0,9,391	0/0:13,0:10:30.10:0,30,668	0/0:25,0:22:57.18:0,57,2172	0/0:21,0:21:48.14:0,48,1223	0/0:28,0:22:61.31:0,61,865	0/0:20,0:20:5.25:0,5,46	0/0:21,0:19:57.17:0,57,1566	0/0:16,0:14:33.11:0,33,1073	1/1:26,0:26:1.30:62,1,0	1/1:25,0:23:6.66:196,7,0	0/0:27,0:24:63:0,63,1719	0/0:25,0:23:63.22:0,63,2152	0/0:8,0:8:17.04:0,17,402	0/0:35,0:33:82.35:0,82,2763	0/0:11,0:10:28.91:0,29,606	0/0:12,0:12:28.65:0,29,500	0/0:10,0:8:21.07:0,21,433	0/0:50,0:45:99:0,103,2615	0/0:15,0:15:4.86:0,5,56	0/1:8,16:22:28.19:167,0,28	1/1:23,0:22:0.47:1,0,0	0/0:16,0:14:33.11:0,33,721	0/0:24,0:21:54.65:0,55,1289	0/0:19,0:18:46.04:0,46,1224	0/0:19,0:15:39:0,39,1213
chr10	75227100	.	CACACACACACACCT	C	442.38	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=5.703;DP=577;FS=9.574;HRun=0;HaplotypeScore=171.6271;InbreedingCoeff=0.7454;MQ=54.77;MQ0=50;MQRankSum=-1.875;QD=3.43;ReadPosRankSum=-2.251;VQSLOD=1.8122;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:17:6.02:71,6,0	0/0:11,0:11:21.07:0,21,690	0/0:15,0:9:15.09:0,15,436	0/0:20,0:13:3.07:0,3,422	0/0:13,0:10:30.10:0,30,607	0/0:26,0:23:57.19:0,57,1884	0/0:22,0:22:51.15:0,51,1170	0/0:29,0:23:63.37:0,63,916	0/0:18,0:18:1.83:0,2,5	0/0:23,0:21:60.18:0,60,1458	0/0:15,0:13:33.11:0,33,992	1/1:25,0:25:1.82:63,2,0	1/1:3,21:22:7:284,7,0	0/0:25,0:22:62.99:0,63,1444	0/0:25,0:23:63.20:0,63,1791	0/0:9,0:9:17.06:0,17,383	0/0:36,0:34:84.81:0,85,2403	0/0:11,0:10:28.23:0,28,495	0/0:12,0:12:31.35:0,31,533	0/0:12,0:10:27.09:0,27,484	0/0:51,0:46:99:0,99,2181	1/1:16,0:16:3.88:29,4,0	1/1:24,0:22:8.90:135,9,0	0/1:21,0:20:0:0,0,0	0/0:16,0:14:33.11:0,33,650	0/0:23,0:20:54.02:0,54,1113	0/0:18,0:17:45.62:0,46,998	0/0:18,0:15:39:0,39,1019
chr10	75227112	.	CCT	C	140.87	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.604;DP=569;FS=10.047;HRun=0;HaplotypeScore=83.6107;InbreedingCoeff=0.7303;MQ=67.75;MQ0=19;MQRankSum=-2.214;QD=1.25;ReadPosRankSum=-2.594;VQSLOD=-0.3083;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:20:6.02:71,6,0	0/0:10,0:10:24.08:0,24,365	0/0:20,0:14:6.14:0,6,580	0/0:27,0:20:0.12:0,0,603	0/0:13,0:12:35.86:0,36,554	0/0:23,0:22:56.15:0,56,857	0/0:21,0:21:57.10:0,57,853	0/0:34,0:31:78.89:0,79,1290	1/1:0,19:19:0.46:1,0,0	0/0:22,0:22:60.17:0,60,949	0/0:12,0:12:30.10:0,30,506	1/1:3,26:29:6.96:71,7,0	1/1:22,0:22:8.84:85,9,0	0/0:21,0:21:57.48:0,57,881	0/0:22,0:21:48.62:0,49,883	0/0:14,0:14:35.94:0,36,598	0/0:31,0:29:62.65:0,63,980	0/0:9,0:9:26.98:0,27,374	0/0:15,0:15:38.41:0,38,665	0/0:10,0:10:30.10:0,30,496	0/0:39,0:38:90.31:0,90,1445	0/0:0,17:17:0:0,0,0	1/1:21,0:19:5.84:43,6,0	0/0:2,17:19:0:0,0,0	0/0:18,0:17:42.14:0,42,668	0/0:22,0:21:53.44:0,53,961	0/0:20,0:20:53.75:0,54,730	0/0:17,0:16:41.98:0,42,563
chr10	75229229	.	A	AG	1999.17	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-7.325;DP=479;FS=2.357;HRun=6;HaplotypeScore=49.9589;InbreedingCoeff=0.9510;MQ=83.30;MQ0=0;MQRankSum=-1.766;QD=28.97;ReadPosRankSum=0.846;VQSLOD=4.1642;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,135,1376	0/0:8,0:8:18.04:0,18,184	0/0:18,0:18:15.09:0,15,236	0/0:20,0:17:5.67:0,6,201	0/0:8,0:8:15.03:0,15,153	0/0:14,0:13:42.08:0,42,421	0/0:29,0:29:78.15:0,78,783	0/0:19,0:19:51.10:0,51,511	1/1:0,18:18:51.16:637,51,0	0/0:8,0:8:21.04:0,21,210	0/0:4,0:4:12.03:0,12,122	1/1:1,14:15:36.12:453,36,0	1/1:0,12:12:33.11:415,33,0	0/0:21,0:21:57.11:0,57,574	0/0:19,0:19:51.11:0,51,520	0/0:22,0:22:63.13:0,63,637	0/0:38,0:38:99:0,108,1076	0/0:26,0:26:72.11:0,72,722	0/0:16,0:16:42.08:0,42,418	0/0:13,0:13:32.59:0,33,297	0/0:25,0:25:69.13:0,69,696	1/1:2,6:8:18.06:226,18,0	1/1:1,5:6:15.05:189,15,0	1/1:2,8:10:21.07:264,21,0	0/0:14,0:14:27.06:0,27,275	0/0:14,0:14:39.08:0,39,393	0/0:17,0:17:48.08:0,48,477	0/0:5,0:5:12.03:0,12,122
chr10	75229796	.	A	AT	4588.23	PASS	AB=0.942;AC=16;AF=0.286;AN=56;BaseQRankSum=2.551;DP=708;FS=2.935;HRun=10;HaplotypeScore=84.3896;InbreedingCoeff=0.8655;MQ=81.59;MQ0=0;MQRankSum=-0.964;QD=19.04;ReadPosRankSum=2.691;VQSLOD=5.7621;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,34:42:49.96:942,50,0	0/0:5,0:5:14.98:0,15,123	0/0:23,0:25:31.90:0,32,273	0/1:17,1:19:0.56:1,0,150	0/0:31,0:31:68.87:0,69,566	0/0:31,0:31:71.84:0,72,587	0/0:19,0:19:50.92:0,51,415	0/0:30,0:30:65.88:0,66,539	1/1:5,22:27:51.13:544,51,0	0/0:23,0:23:62.71:0,63,503	0/0:21,0:21:50.42:0,50,396	1/1:6,20:26:25.09:621,25,0	1/1:5,24:29:51.43:744,51,0	0/0:21,0:21:53.81:0,54,428	0/0:26,0:26:68.87:0,69,562	0/0:23,1:24:33.91:0,34,483	0/0:30,0:30:82.87:0,83,662	0/0:24,0:24:71.82:0,72,575	0/0:21,0:21:44.87:0,45,363	0/0:32,2:34:10.89:0,11,499	0/0:30,0:30:65.63:0,66,526	1/1:2,17:19:45.11:479,45,0	1/1:4,16:20:34.33:355,34,0	1/1:0,31:31:84.21:896,84,0	0/1:25,2:28:8.04:8,0,344	0/0:27,0:27:65.90:0,66,542	0/0:33,0:32:92.86:0,93,761	0/0:11,0:11:32.96:0,33,271
chr10	75232461	.	G	GC	3923.48	PASS	AB=0.935;AC=15;AF=0.268;AN=56;BaseQRankSum=-6.933;DP=584;FS=4.808;HRun=6;HaplotypeScore=67.6263;InbreedingCoeff=0.8950;MQ=85.99;MQ0=0;MQRankSum=-2.199;QD=23.08;ReadPosRankSum=0.383;VQSLOD=3.1556;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:31:78.25:980,78,0	0/0:6,0:6:18.01:0,18,174	0/0:22,0:19:30.75:0,31,284	0/1:27,0:26:38.89:39,0,204	0/0:10,0:10:24.05:0,24,244	0/0:21,0:21:60.13:0,60,612	0/0:26,0:26:66.13:0,66,666	0/0:21,0:21:45.08:0,45,454	1/1:2,25:27:66.21:830,66,0	0/0:15,0:15:42.08:0,42,424	0/0:10,0:10:26.64:0,27,249	1/1:3,20:23:45.14:566,45,0	1/1:6,14:20:39.12:490,39,0	0/0:29,0:29:75.15:0,75,756	0/0:32,0:32:84.17:0,84,849	0/0:26,0:26:66.15:0,66,673	0/0:26,0:26:72.13:0,72,725	0/0:28,0:28:81.18:0,81,826	0/0:9,0:9:21.02:0,21,205	0/0:17,0:17:42.05:0,42,417	0/0:53,0:53:99:0,129,1313	1/1:0,9:9:27.09:339,27,0	1/1:1,8:9:18.06:226,18,0	1/1:4,18:22:36.12:453,36,0	0/0:19,0:19:54.12:0,54,550	0/0:22,0:22:57.09:0,57,564	0/0:19,0:19:51.11:0,51,519	0/0:3,0:3:9.02:0,9,92
chr10	75232672	.	CAAA	C	2231.24	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=9.917;DP=606;FS=24.051;HRun=15;HaplotypeScore=109.3674;InbreedingCoeff=0.9118;MQ=70.28;MQ0=5;MQRankSum=-10.347;QD=16.41;ReadPosRankSum=1.957;VQSLOD=0.7472;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:28:59.30:0,59,472	0/0:8,0:8:24.08:0,24,404	0/0:38,0:21:29.31:0,29,304	0/1:33,0:21:5.21:5,0,231	0/0:23,0:26:51.11:0,51,824	0/0:21,0:25:63.13:0,63,983	0/0:19,0:21:48.14:0,48,821	0/0:24,0:29:66.10:0,66,979	1/1:5,7:12:26.95:284,27,0	0/0:24,0:26:57.15:0,57,917	0/0:17,0:20:45.11:0,45,707	1/1:9,17:26:62.98:686,63,0	1/1:4,11:17:40.69:432,41,0	0/0:17,0:20:48.10:0,48,726	0/0:15,0:18:43.33:0,43,637	0/0:17,0:23:57.11:0,57,892	0/0:22,0:26:57.15:0,57,982	0/0:25,0:30:75.15:0,75,1161	0/0:12,0:18:32.98:0,33,489	0/0:4,0:20:54.55:0,55,734	0/0:6,0:10:15.04:0,15,187	1/1:6,11:18:38.94:413,39,0	1/1:6,13:19:41.19:465,41,0	1/1:6,5:8:11.96:133,12,0	0/0:17,0:20:58.38:0,58,913	0/0:10,0:18:34.66:0,35,496	0/0:6,0:23:29.83:0,30,451	0/0:12,0:18:48.04:0,48,638
chr10	75232689	.	CA	C	2645	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.448;DP=596;FS=28.860;HRun=4;HaplotypeScore=89.8009;InbreedingCoeff=0.9441;MQ=70.91;MQ0=5;MQRankSum=-9.590;QD=24.05;ReadPosRankSum=1.536;VQSLOD=1.8893;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:85.51:0,86,1147	0/0:6,0:6:18.06:0,18,249	0/0:38,0:21:40.64:0,41,431	0/0:31,2:25:0.17:0,0,420	0/0:22,0:21:57.19:0,57,792	0/0:23,0:23:63.21:0,63,880	0/0:21,0:21:54.10:0,54,715	0/0:22,0:22:63.18:0,63,824	1/1:6,8:14:36.04:416,36,0	0/0:23,0:23:63.21:0,63,877	0/0:18,0:18:51.16:0,51,693	1/1:1,26:27:60.04:695,60,0	1/1:1,19:20:50.95:587,51,0	0/0:16,0:16:45.15:0,45,626	0/0:16,0:16:42.14:0,42,583	0/0:32,0:32:86.88:0,87,1189	0/0:31,0:31:84.26:0,84,1144	0/0:32,0:32:90.16:0,90,1176	0/0:16,0:16:39.13:0,39,545	0/0:19,0:19:45.14:0,45,608	0/0:11,0:11:24.08:0,24,335	1/1:2,15:17:45.13:526,45,0	1/1:0,18:18:36.11:428,36,0	1/1:1,13:14:15.05:179,15,0	0/0:21,0:20:57.19:0,57,794	0/0:19,0:19:45.15:0,45,630	0/0:19,0:19:32.97:0,33,445	0/0:13,0:13:33.08:0,33,439
chr10	75233822	.	C	CT	428.30	PASS	AB=0.947;AC=8;AF=0.143;AN=56;BaseQRankSum=-2.904;DP=638;FS=2.770;HRun=14;HaplotypeScore=89.1187;InbreedingCoeff=0.1430;MQ=65.08;MQ0=1;MQRankSum=0.252;QD=2.84;ReadPosRankSum=-3.023;VQSLOD=-0.0922;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,25:39:28.34:462,28,0	0/0:10,0:11:16.74:0,17,100	0/0:13,0:10:7.11:0,7,55	0/1:10,0:10:3.05:3,0,27	0/1:19,3:24:38.67:39,0,156	0/0:30,0:30:38.95:0,39,354	0/0:13,0:16:21.66:0,22,125	0/0:38,0:40:16.77:0,17,297	0/0:21,0:22:40.29:0,40,253	0/0:20,0:22:30.56:0,31,185	0/0:16,1:18:11.04:0,11,186	0/0:20,0:20:35.20:0,35,229	0/0:23,0:23:26.90:0,27,278	0/0:20,1:24:12.91:0,13,191	0/0:30,2:34:16.54:0,17,312	0/0:24,1:27:39.05:0,39,355	0/0:22,0:22:38.19:0,38,244	0/1:16,0:16:8.61:9,0,144	0/1:14,1:17:15.68:16,0,114	0/0:19,2:21:19.86:0,20,244	0/0:15,0:17:31.50:0,31,196	0/0:25,1:27:21.49:0,21,260	0/1:12,2:15:27.06:27,0,95	0/0:22,0:22:44.11:0,44,279	0/0:26,0:29:57.40:0,57,357	0/0:20,1:21:34.77:0,35,217	0/1:25,1:28:4.10:4,0,195	0/0:22,4:26:11.87:0,12,196
chr10	75233861	.	TA	T	6325.67	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.664;DP=640;FS=5.814;HRun=1;HaplotypeScore=68.8424;InbreedingCoeff=0.9999;MQ=83.49;MQ0=1;MQRankSum=-2.115;QD=40.55;ReadPosRankSum=2.472;VQSLOD=5.5505;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,1550	0/0:10,0:10:30.07:0,30,433	0/0:22,0:21:51.43:0,51,813	0/0:24,0:24:68.78:0,69,1036	0/0:20,0:20:60.20:0,60,959	0/0:25,0:25:72.25:0,72,1149	0/0:18,0:18:54.18:0,54,861	0/0:34,0:34:99:0,102,1591	1/1:0,22:22:63.21:881,63,0	0/0:19,0:19:57.19:0,57,892	0/0:22,0:22:63.13:0,63,975	1/1:0,30:30:90.30:1258,90,0	1/1:0,28:28:84.28:1173,84,0	0/0:18,0:18:51.16:0,51,790	0/0:34,0:34:99:0,99,1579	0/0:26,0:26:78.25:0,78,1219	0/0:17,0:17:48.14:0,48,741	0/0:14,0:13:36.12:0,36,575	0/0:23,0:23:69.22:0,69,1078	0/0:18,0:18:51.16:0,51,791	0/0:24,0:24:66.23:0,66,1055	1/1:0,27:27:81.27:1131,81,0	1/1:0,23:23:66.22:919,66,0	1/1:0,26:26:69.23:965,69,0	0/0:22,0:22:66.21:0,66,1033	0/0:21,0:21:60.20:0,60,960	0/0:22,0:21:66.22:0,66,1048	0/0:15,0:15:45.10:0,45,666
chr10	75234030	.	AC	A	1597.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.973;DP=733;FS=2.588;HRun=4;HaplotypeScore=74.3208;InbreedingCoeff=0.9902;MQ=88.11;MQ0=0;MQRankSum=-5.775;QD=31.94;ReadPosRankSum=1.011;VQSLOD=4.2975;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,49:50:99:1692,141,0	0/0:10,0:10:24.08:0,24,335	0/0:31,0:31:84.27:0,84,1126	0/0:20,0:20:48.16:0,48,652	0/0:18,0:18:51.17:0,51,713	0/0:20,0:20:54.16:0,54,724	0/0:27,0:27:78.26:0,78,1092	0/0:36,0:36:99:0,99,1357	0/0:33,0:33:99:0,99,1370	0/0:25,0:25:75.25:0,75,1050	0/0:17,0:17:51.17:0,51,713	0/0:26,0:26:78.23:0,78,1056	0/0:31,0:31:87.27:0,87,1199	0/0:24,0:24:72.23:0,72,990	0/0:48,0:48:99:0,141,1959	0/0:38,0:38:99:0,108,1496	0/0:33,0:33:96.30:0,96,1326	0/0:18,0:18:51.17:0,51,712	0/0:18,0:18:54.17:0,54,740	0/0:25,0:25:75.25:0,75,1048	0/0:31,0:31:90.29:0,90,1243	0/0:19,0:19:54.18:0,54,755	0/0:23,0:23:66.22:0,66,924	0/0:32,0:32:90.28:0,90,1240	0/0:20,0:20:57.19:0,57,797	0/0:18,0:18:18.43:0,18,678	0/0:32,0:32:96.32:0,96,1343	0/0:10,0:10:30.10:0,30,419
chr10	75234204	.	G	GTA	6251.99	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-10.733;DP=751;FS=7.999;HRun=0;HaplotypeScore=89.5703;InbreedingCoeff=0.9971;MQ=88.49;MQ0=0;MQRankSum=-1.573;QD=46.31;ReadPosRankSum=1.162;VQSLOD=5.7859;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,147,2037	0/0:6,0:6:18.06:0,18,251	0/0:24,0:24:42.49:0,42,740	0/0:29,0:29:68.90:0,69,944	0/0:33,0:33:96.32:0,96,1344	0/0:19,0:19:51.15:0,51,696	0/0:31,0:31:84.26:0,84,1152	0/0:30,0:30:75.24:0,75,1030	1/1:1,15:17:39.13:696,39,0	0/0:30,0:30:84.28:0,84,1177	0/0:27,0:27:78.26:0,78,1091	1/1:3,19:23:21.20:1034,21,0	1/1:1,28:29:84.29:1498,84,0	0/0:26,0:26:75.25:0,75,1050	0/0:49,0:49:99:0,144,2000	0/0:34,0:34:99:0,102,1428	0/0:33,0:33:93.27:0,93,1265	0/0:21,0:21:60.20:0,60,839	0/0:18,0:18:54.17:0,54,741	0/0:15,0:15:39.13:0,39,546	0/0:46,0:46:99:0,132,1849	1/1:2,18:20:48.16:865,48,0	1/1:2,15:18:44.26:809,44,0	1/1:1,27:28:75.26:1351,75,0	0/0:29,0:29:84.25:0,84,1141	0/0:28,0:28:75.25:0,75,1043	0/0:25,0:25:72.24:0,72,1008	0/0:8,0:8:24.08:0,24,336
chr10	75235678	.	A	AG	2148.58	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.968;DP=609;FS=0.897;HRun=1;HaplotypeScore=94.5655;InbreedingCoeff=0.9928;MQ=81.28;MQ0=0;MQRankSum=-12.298;QD=20.86;ReadPosRankSum=1.731;VQSLOD=3.8891;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:45.98:0,46,247	0/0:17,0:17:51.15:0,51,640	0/0:14,0:14:34.66:0,35,419	0/0:28,0:27:69.16:0,69,826	0/0:21,0:21:60.19:0,60,776	0/0:24,0:24:72.20:0,72,894	0/0:30,0:30:90.24:0,90,1108	0/0:22,0:22:63.19:0,63,789	1/1:2,21:23:16.03:470,16,0	0/0:22,0:22:63.19:0,63,793	0/0:9,0:9:27.09:0,27,345	1/1:5,20:25:70.56:686,71,0	1/1:4,13:17:44.76:397,45,0	0/0:26,0:26:72.11:0,72,881	0/0:28,0:28:84.21:0,84,1052	0/0:22,0:22:66.20:0,66,842	0/0:42,0:42:99:0,123,1534	0/0:21,0:21:60.15:0,60,758	0/0:24,0:24:66.13:0,66,760	0/0:12,0:12:33.03:0,33,393	0/0:31,0:31:91.84:0,92,1158	1/1:1,12:13:29.04:274,29,0	1/1:3,4:7:14.95:130,15,0	1/1:6,12:18:38.95:378,39,0	0/0:21,0:21:63.18:0,63,790	0/0:30,0:30:87.27:0,87,1104	0/0:25,0:25:72.23:0,72,932	0/0:8,0:8:21.04:0,21,244
chr10	75235681	.	C	CCCCCCG	8925.46	PASS	AB=0.628;AC=13;AF=0.232;AN=56;BaseQRankSum=12.327;DP=644;FS=3.388;HRun=0;HaplotypeScore=146.6491;InbreedingCoeff=0.9443;MQ=81.29;MQ0=0;MQRankSum=-15.420;QD=55.44;ReadPosRankSum=-0.342;VQSLOD=5.0015;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,21:35:48.16:1484,48,0	0/0:17,0:17:48.14:0,48,1020	0/0:14,0:14:27.25:0,27,560	0/0:29,0:29:71.83:0,72,1313	0/0:21,0:21:63.21:0,63,1356	0/0:25,0:25:63.20:0,63,1355	0/0:33,0:33:90.25:0,90,1786	0/0:22,0:22:57.19:0,57,1221	0/1:11,16:27:0.08:1579,0,0	0/0:21,0:21:63.19:0,63,1298	0/0:9,0:9:27.09:0,27,598	1/1:9,20:29:75.14:2020,75,0	1/1:6,13:21:59.96:1680,60,0	0/0:27,0:27:72.25:0,72,1554	0/0:29,0:29:78.27:0,78,1729	0/0:21,0:21:63.20:0,63,1355	0/0:42,0:42:99:0,117,2476	0/0:21,0:21:57.15:0,57,1177	0/0:23,0:23:48.16:0,48,1009	0/0:12,0:12:30.09:0,30,624	0/0:34,0:34:96.24:0,96,1918	1/1:9,7:16:33.06:778,33,0	1/1:7,4:11:15.03:369,15,0	1/1:10,11:22:38.80:1015,39,0	0/0:21,0:21:57.18:0,57,1224	0/0:30,0:30:84.28:0,84,1822	0/0:26,0:26:71.76:0,72,1509	0/0:6,0:6:15.05:0,15,333
chr10	75236312	.	GAC	G	163.52	PASS	AB=0.941;AC=14;AF=0.304;AN=46;BaseQRankSum=0.018;DP=543;FS=2.283;HRun=0;HaplotypeScore=79.1289;InbreedingCoeff=0.1288;MQ=65.21;MQ0=8;MQRankSum=-0.756;QD=0.75;ReadPosRankSum=0.439;VQSLOD=1.1636;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:35.39:0,35,344	0/0:9,0:9:3.01:0,3,44	./.	./.	0/0:13,0:13:8.96:0,9,69	0/0:9,0:9:8.99:0,9,90	0/1:32,0:32:7.53:8,0,237	./.	0/0:12,0:12:5.96:0,6,43	0/1:18,0:18:0.01:0,0,0	0/1:6,2:8:10.30:24,0,10	0/0:16,0:16:5.89:0,6,45	0/0:12,0:12:5.97:0,6,45	0/0:22,0:21:14.89:0,15,109	1/1:19,2:21:3:32,3,0	0/1:15,3:20:25.94:105,0,26	0/1:24,0:26:15.11:15,0,163	0/0:18,0:17:23.13:0,23,214	./.	./.	0/1:38,0:36:35.82:53,0,36	0/0:24,0:25:17.94:0,18,165	0/0:16,0:16:10.84:0,11,98	0/0:24,0:24:3.81:0,4,214	1/1:15,0:15:2.84:14,3,0	0/1:20,0:19:2.68:3,0,21	1/1:14,3:18:4.82:37,5,0	0/1:2,0:2:0:0,0,0
chr10	75236343	.	A	ACG	941.96	PASS	AB=0.745;AC=7;AF=0.125;AN=56;BaseQRankSum=1.147;DP=643;FS=1.280;HRun=0;HaplotypeScore=87.0410;InbreedingCoeff=-0.1477;MQ=52.78;MQ0=25;MQRankSum=3.825;QD=5.64;ReadPosRankSum=4.261;VQSLOD=2.8624;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:43:99:201,0,244	0/0:10,0:10:19.38:0,19,160	0/0:24,0:6:18:0,18,172	0/0:29,0:13:7.14:0,7,120	0/0:16,0:16:29.94:0,30,243	0/0:16,0:15:35.88:0,36,305	0/0:32,0:31:77.26:0,77,711	0/0:18,0:15:44.70:0,45,338	0/1:4,8:12:33.80:96,0,34	0/0:30,0:29:79.63:0,80,656	0/0:15,0:15:26.87:0,27,214	0/1:2,22:24:26.45:101,0,26	0/1:17,0:17:41.41:130,0,41	0/0:29,0:27:68.77:0,69,545	0/0:21,0:21:23.97:0,24,199	0/0:26,0:26:74.83:0,75,626	0/0:35,0:35:93.76:0,94,749	0/0:27,0:26:74.75:0,75,634	0/0:13,0:12:28.04:0,28,192	0/0:12,0:12:23.94:0,24,193	0/0:57,0:52:93.88:0,94,757	0/1:8,19:27:60.17:166,0,60	0/1:13,1:14:27.97:85,0,28	0/1:8,21:28:75.95:294,0,76	0/0:23,0:22:53.81:0,54,427	0/0:23,0:22:62.81:0,63,529	0/0:16,0:16:36.67:0,37,283	0/0:4,0:4:11.97:0,12,96
chr10	75236760	.	C	CACACACAAACACACG	23067.41	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.575;DP=771;FS=6.671;HRun=0;HaplotypeScore=314.3813;InbreedingCoeff=0.9985;MQ=65.49;MQ0=1;MQRankSum=-17.946;QD=126.05;ReadPosRankSum=-1.822;VQSLOD=3.3070;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,13:41:87.20:4475,87,0	0/0:6,0:6:18.06:0,18,763	0/0:35,0:30:80.40:0,80,3253	0/0:31,0:27:81.17:0,81,2821	0/0:21,0:21:60.17:0,60,2353	0/0:19,0:19:54.17:0,54,2241	0/0:36,0:36:94.01:0,94,3925	0/0:45,0:45:99:0,120,4507	1/1:11,11:25:60.21:3848,60,0	0/0:36,0:36:99:0,108,4601	0/0:22,0:22:60.21:0,60,2394	1/1:14,14:32:78.27:4648,78,0	1/1:17,11:30:78.27:4487,78,0	0/0:35,0:35:99:0,102,4399	0/0:28,0:28:78.27:0,78,3439	0/0:26,0:26:75.26:0,75,3398	0/0:44,0:44:99:0,129,5366	0/0:33,0:33:93.28:0,93,3769	0/0:28,0:27:78.22:0,78,2925	0/0:16,0:16:42.14:0,42,1763	0/0:43,0:43:99:0,129,5323	1/1:7,10:18:45.15:2186,45,0	1/1:8,8:16:39.13:1442,39,0	1/1:10,9:21:39.13:1981,39,0	0/0:23,0:23:66.23:0,66,2783	0/0:28,0:28:75.25:0,75,3200	0/0:21,0:21:63.22:0,63,2642	0/0:12,0:12:36.12:0,36,1524
chr10	75236998	.	G	GT	1562.39	PASS	AB=0.846;AC=15;AF=0.268;AN=56;BaseQRankSum=-1.531;DP=515;FS=6.631;HRun=13;HaplotypeScore=75.0584;InbreedingCoeff=0.3563;MQ=66.08;MQ0=2;MQRankSum=-0.745;QD=9.59;ReadPosRankSum=-0.757;VQSLOD=2.6916;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,2:14:32.65:224,33,0	0/0:15,0:15:35.59:0,36,246	0/0:10,0:5:5.43:0,5,24	0/0:9,0:6:1.04:0,1,19	0/0:30,1:31:27.90:0,28,328	0/0:25,1:26:17.94:0,18,262	0/1:9,0:10:22.91:23,0,103	0/0:21,1:24:17.83:0,18,250	1/1:3,15:18:21.46:342,21,0	0/0:22,0:22:44.54:0,45,307	0/0:15,1:18:3.98:0,4,182	0/1:10,5:16:18.47:231,0,18	1/1:10,10:20:0.81:278,1,0	0/0:10,0:12:25.79:0,26,168	0/0:25,0:26:14.38:0,14,328	0/0:20,0:20:29.66:0,30,205	0/0:13,1:15:3.41:0,3,151	0/1:12,1:13:7.15:7,0,98	0/0:17,0:18:21.04:0,21,214	0/0:27,3:30:22.42:0,22,363	0/0:8,0:8:11.80:0,12,80	0/1:9,7:17:31.87:152,0,32	1/1:5,13:20:21.09:306,21,0	1/1:3,6:9:0.44:147,0,0	0/1:21,3:26:19.91:20,0,298	0/0:14,0:14:29.39:0,29,203	0/0:35,0:37:66.29:0,66,436	0/0:15,0:16:21.83:0,22,177
chr10	75240808	.	GCT	G	661.85	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.626;DP=722;FS=0.000;HRun=0;HaplotypeScore=103.2658;InbreedingCoeff=0.9987;MQ=92.52;MQ0=0;MQRankSum=-7.945;QD=23.64;ReadPosRankSum=-0.725;VQSLOD=4.0674;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:28:75.12:757,75,0	0/0:9,0:9:27.09:0,27,547	0/0:26,0:26:61.72:0,62,1423	0/0:35,0:35:99:0,99,1880	0/0:27,0:27:81.28:0,81,1646	0/0:19,0:19:57.20:0,57,1158	0/0:30,0:30:87.30:0,87,1757	0/0:31,0:31:93.32:0,93,1863	0/0:30,0:30:87.30:0,87,1756	0/0:22,0:22:66.22:0,66,1301	0/0:22,0:22:66.23:0,66,1329	0/0:28,0:28:84.29:0,84,1705	0/0:26,0:26:78.27:0,78,1584	0/0:24,0:24:72.25:0,72,1461	0/0:26,0:26:78.27:0,78,1584	0/0:40,0:40:99:0,120,2438	0/0:32,0:31:96.33:0,96,1950	0/0:24,0:24:72.25:0,72,1448	0/0:31,0:31:93.31:0,93,1834	0/0:29,0:29:87.30:0,87,1763	0/0:42,0:42:99:0,126,2522	0/0:19,0:19:57.20:0,57,1150	0/0:15,0:15:45.15:0,45,891	0/0:31,0:31:93.32:0,93,1890	0/0:27,0:27:81.27:0,81,1586	0/0:18,0:18:54.19:0,54,1087	0/0:20,0:20:60.21:0,60,1218	0/0:11,0:11:33.11:0,33,671
chr10	75240811	.	AGTG	A	739.01	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.319;DP=732;FS=1.668;HRun=0;HaplotypeScore=119.2767;InbreedingCoeff=0.9977;MQ=90.59;MQ0=0;MQRankSum=-8.249;QD=26.39;ReadPosRankSum=-0.010;VQSLOD=3.7071;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:72.21:834,72,0	0/0:9,0:9:24.08:0,24,591	0/0:26,0:27:78.22:0,78,1796	0/0:31,0:31:87.30:0,87,2082	0/0:29,0:29:87.30:0,87,2109	0/0:22,0:22:66.23:0,66,1588	0/0:31,0:31:90.31:0,90,2180	0/0:33,0:33:96.32:0,96,2243	0/0:29,0:29:87.25:0,87,1996	0/0:22,0:22:66.23:0,66,1610	0/0:24,0:24:72.25:0,72,1716	0/0:29,0:29:87.28:0,87,2063	0/0:26,0:26:75.24:0,75,1786	0/0:24,0:24:72.25:0,72,1736	0/0:30,0:30:90.31:0,90,2206	0/0:42,0:42:99:0,126,3015	0/0:32,0:31:96.31:0,96,2316	0/0:24,0:24:72.22:0,72,1693	0/0:32,0:32:96.31:0,96,2277	0/0:29,0:29:87.28:0,87,2083	0/0:40,0:40:99:0,120,2957	0/0:20,0:20:60.21:0,60,1408	0/0:14,0:14:42.14:0,42,1034	0/0:31,0:31:93.32:0,93,2292	0/0:25,0:25:75.24:0,75,1799	0/0:18,0:18:54.18:0,54,1266	0/0:20,0:20:60.21:0,60,1478	0/0:11,0:11:33.11:0,33,813
chr10	75243089	.	T	TG	8985.41	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-3.971;DP=689;FS=6.223;HRun=2;HaplotypeScore=73.1179;InbreedingCoeff=0.9997;MQ=81.86;MQ0=0;MQRankSum=-2.169;QD=39.94;ReadPosRankSum=2.845;VQSLOD=5.3558;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,44:46:99:1815,126,0	0/0:9,0:9:27.08:0,27,335	0/0:24,0:24:44.85:0,45,507	0/0:19,0:19:43.79:0,44,554	0/0:19,0:19:54.17:0,54,670	0/0:15,0:15:45.13:0,45,544	0/0:21,0:21:60.19:0,60,744	0/0:28,0:28:75.23:0,75,919	1/1:0,34:34:93.31:1339,93,0	0/0:18,0:18:48.15:0,48,595	0/0:16,0:16:42.13:0,42,520	1/1:0,39:39:99:1642,114,0	1/1:0,27:27:81.27:1166,81,0	0/0:27,0:27:75.22:0,75,917	0/0:39,0:39:99:0,117,1437	0/0:29,0:29:87.27:0,87,1078	0/0:29,0:29:84.26:0,84,1041	0/0:17,0:17:51.16:0,51,632	0/0:18,0:18:54.14:0,54,653	0/0:13,0:13:36.11:0,36,446	0/0:51,0:51:99:0,147,1822	1/1:1,19:20:51.17:734,51,0	1/1:0,13:13:36.12:518,36,0	1/1:0,46:46:99:1772,123,0	0/0:15,0:15:42.13:0,42,521	0/0:21,0:21:57.18:0,57,707	0/0:23,0:23:69.22:0,69,855	0/0:13,0:13:39.11:0,39,470
chr10	75245407	.	CG	C	7206.18	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.878;DP=792;FS=0.972;HRun=3;HaplotypeScore=74.6182;InbreedingCoeff=0.9997;MQ=76.80;MQ0=0;MQRankSum=-2.192;QD=33.99;ReadPosRankSum=4.686;VQSLOD=5.2548;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,45:46:99:1598,129,0	0/0:20,0:20:60.15:0,60,823	0/0:23,0:23:62.83:0,63,825	0/0:20,0:20:49.97:0,50,660	0/0:16,0:16:45.15:0,45,646	0/0:20,0:20:60.18:0,60,843	0/0:48,0:48:99:0,141,2027	0/0:36,0:36:99:0,105,1400	1/1:2,35:37:99:1263,102,0	0/0:28,0:28:81.27:0,81,1165	0/0:10,0:10:30.10:0,30,427	1/1:1,40:41:99:1449,117,0	1/1:1,27:28:72.23:891,72,0	0/0:45,0:45:99:0,129,1785	0/0:22,0:22:63.20:0,63,889	0/0:28,0:28:78.26:0,78,1122	0/0:36,0:36:99:0,105,1466	0/0:34,0:34:99:0,102,1466	0/0:27,0:27:72.22:0,72,993	0/0:12,0:12:33.09:0,33,455	0/0:67,0:67:99:0,190,2619	1/1:0,18:18:42.13:519,42,0	1/1:0,12:12:33.10:409,33,0	1/1:1,29:30:87.27:1077,87,0	0/0:19,0:19:57.18:0,57,802	0/0:32,0:32:86.99:0,87,1187	0/0:27,0:27:75.25:0,75,1079	0/0:10,0:10:30.10:0,30,432
chr10	75247438	.	TGAAAAAATGAAAAAGAG	T	13247.45	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.210;DP=619;FS=2.438;HRun=0;HaplotypeScore=286.2162;InbreedingCoeff=0.9966;MQ=75.78;MQ0=0;MQRankSum=-14.839;QD=110.40;ReadPosRankSum=5.383;VQSLOD=4.5088;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:24.08:977,24,0	0/0:11,0:11:33.11:0,33,2506	0/0:18,0:18:54.18:0,54,3197	0/0:14,0:13:39.13:0,39,2265	0/0:37,0:37:99:0,111,7775	0/0:24,0:24:72.25:0,72,5528	0/0:20,0:20:60.21:0,60,4351	0/0:30,0:30:87.30:0,87,5993	1/1:0,20:20:48.16:2276,48,0	0/0:32,0:32:96.33:0,96,6592	0/0:15,0:15:45.15:0,45,3424	1/1:1,24:25:66.08:3335,66,0	1/1:2,23:27:60.21:2806,60,0	0/0:14,0:14:42.14:0,42,3154	0/0:30,0:30:90.30:0,90,6888	0/0:33,0:33:99:0,99,7137	0/0:24,0:24:72.25:0,72,5262	0/0:22,0:22:66.23:0,66,4807	0/0:24,0:24:72.24:0,72,4356	0/0:27,0:27:81.28:0,81,6021	0/0:28,0:28:84.29:0,84,6147	1/1:0,14:14:39.05:1680,39,0	1/1:0,15:15:33.20:1563,33,0	1/1:2,5:7:15.05:610,15,0	0/0:22,0:22:66.21:0,66,4681	0/0:33,0:33:96.33:0,96,7228	0/0:28,0:28:84.29:0,84,6554	0/0:13,0:13:36.12:0,36,2571
chr10	75247455	.	G	GCGGAACAT	5530.98	PASS	AB=0.942;AC=8;AF=0.143;AN=56;BaseQRankSum=6.709;DP=649;FS=7.744;HRun=0;HaplotypeScore=219.4579;InbreedingCoeff=0.0749;MQ=75.89;MQ0=0;MQRankSum=-11.901;QD=35.46;ReadPosRankSum=-2.589;VQSLOD=3.0686;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,2:17:25.91:728,0,26	0/0:10,0:10:30.10:0,30,862	0/0:16,0:16:47.50:0,48,1211	0/0:17,0:17:48:0,48,1035	0/0:35,0:35:99:0,102,2805	0/0:26,0:26:78.25:0,78,2213	0/0:21,0:21:63.18:0,63,1710	0/0:35,0:35:99:0,102,2562	0/1:23,1:24:99:763,0,114	0/0:25,0:25:75.26:0,75,2190	0/0:15,0:15:39.13:0,39,1133	0/1:31,0:31:99:643,0,412	0/1:28,2:30:99:1062,0,208	0/0:19,0:19:54.19:0,54,1560	0/0:35,0:35:99:0,102,3004	0/0:29,0:29:84.29:0,84,2397	0/0:23,0:23:69.22:0,69,1897	0/0:23,0:23:69.07:0,69,1920	0/0:24,0:24:72.23:0,72,1999	0/0:25,0:25:75.26:0,75,2268	0/0:28,0:28:81.26:0,81,2310	0/1:18,2:20:99:969,0,111	0/1:17,1:18:99:532,0,146	1/1:13,2:15:5.79:834,6,0	0/0:17,0:17:51.18:0,51,1522	0/0:32,0:32:93.32:0,93,2637	0/0:27,0:26:81.20:0,81,2134	0/0:11,0:11:33.11:0,33,925
chr10	75248419	.	TAAGTCTGGGTCTTCTG	T	1595.84	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=5.613;DP=337;FS=26.105;HRun=0;HaplotypeScore=108.4675;InbreedingCoeff=0.7723;MQ=35.58;MQ0=86;MQRankSum=-5.201;QD=79.79;ReadPosRankSum=0.567;VQSLOD=1.7115;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:9:27.09:0,27,2129	0/0:5,0:5:15.05:0,15,1141	./.	./.	0/0:7,0:6:15.05:0,15,1187	0/0:20,0:15:42.14:0,42,3097	0/0:14,0:9:24.08:0,24,1541	0/0:9,0:1:3.01:0,3,208	1/1:1,7:7:18.06:852,18,0	0/0:12,0:10:30.10:0,30,2311	0/0:11,0:10:18.06:0,18,1416	1/1:1,2:3:6.02:284,6,0	1/1:3,0:3:3.01:42,3,0	0/0:7,0:6:15.05:0,15,1164	0/0:30,0:25:69.24:0,69,5425	0/0:26,0:20:60.21:0,60,4608	0/0:17,0:13:33.11:0,33,2597	0/0:10,0:6:9.03:0,9,714	0/0:11,0:9:24.07:0,24,1630	0/0:17,0:16:39.13:0,39,2889	0/0:16,0:12:27.09:0,27,2141	1/1:0,2:2:6.02:284,6,0	1/1:0,2:2:3.01:142,3,0	1/1:1,1:1:3.01:142,3,0	0/0:16,0:14:27.09:0,27,2141	0/0:21,0:16:45.15:0,45,3536	0/0:19,0:15:42.14:0,42,3136	0/0:7,0:6:18.06:0,18,1424
chr10	75248500	.	TTGG	T	302.92	PASS	AB=0.977;AC=14;AF=0.259;AN=54;BaseQRankSum=3.106;DP=334;FS=28.093;HRun=0;HaplotypeScore=52.7151;InbreedingCoeff=-0.2042;MQ=42.60;MQ0=49;MQRankSum=-2.204;QD=2.06;ReadPosRankSum=3.453;VQSLOD=0.0938;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:16:23.76:0,24,369	0/0:1,0:1:2.22:0,2,7	0/0:10,0:1:3.01:0,3,44	0/0:10,0:3:6.01:0,6,60	0/1:16,0:6:0.46:0,0,129	0/0:14,0:13:28.31:0,28,340	0/1:9,2:11:44.40:44,0,134	0/0:15,0:9:1.97:0,2,152	0/1:5,0:3:40.47:53,0,40	0/0:12,0:8:20.31:0,20,184	0/1:7,0:4:6.80:7,0,60	0/0:12,0:11:27.08:0,27,314	./.	1/1:7,2:4:5.23:47,5,0	0/0:18,0:10:17.65:0,18,236	0/1:12,0:7:21.76:22,0,74	0/0:26,0:21:27.40:0,27,332	0/1:17,0:11:27.88:28,0,61	0/1:17,0:14:63.86:64,0,246	0/1:12,0:8:5.80:6,0,87	0/0:9,0:9:26.54:0,27,241	0/1:5,0:4:20.86:21,0,92	0/1:11,0:9:66.96:67,0,147	0/1:7,0:4:23.87:24,0,61	0/0:14,0:8:23.70:0,24,229	0/0:18,0:14:28.19:0,28,290	0/1:16,1:12:63.73:64,0,104	0/0:7,0:6:8.14:0,8,102
chr10	75250582	.	TACACACACACACAC	T	249.21	PASS	AB=1.000;AC=3;AF=0.058;AN=52;BaseQRankSum=3.570;DP=605;FS=2.371;HRun=0;HaplotypeScore=192.3647;InbreedingCoeff=0.3757;MQ=66.14;MQ0=27;MQRankSum=-3.357;QD=2.68;ReadPosRankSum=-1.787;VQSLOD=2.6198;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,13:45:9.03:331,9,0	0/0:8,0:10:9.03:0,9,341	./.	./.	0/0:7,0:10:12.04:0,12,628	0/0:19,0:19:11.98:0,12,622	0/0:20,0:20:18.06:0,18,797	0/0:21,0:18:6.02:0,6,136	0/0:14,0:14:12.51:0,13,792	0/0:17,0:17:23.98:0,24,757	0/0:9,0:10:6.02:0,6,291	0/0:24,0:24:30.10:0,30,1660	0/0:14,0:17:18.06:0,18,1097	0/0:16,0:18:9.50:0,10,440	0/0:16,0:20:21.07:0,21,1004	0/0:19,0:21:24.08:0,24,1016	0/0:26,0:26:31.35:0,31,1060	0/0:16,0:19:18.03:0,18,682	0/0:16,0:16:17.04:0,17,626	0/0:10,0:10:9.03:0,9,437	0/0:46,0:46:48.16:0,48,2205	0/0:9,0:8:12.04:0,12,719	0/0:8,0:7:6.02:0,6,395	0/1:37,0:47:6.01:6,0,1276	0/0:17,0:17:17.17:0,17,748	0/0:22,0:21:32.81:0,33,1377	0/0:16,0:15:6.02:0,6,276	0/0:8,0:9:15.05:0,15,579
chr10	75251304	.	GTTAC	G	5296.60	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.762;DP=589;FS=5.381;HRun=0;HaplotypeScore=96.4671;InbreedingCoeff=0.9995;MQ=85.33;MQ0=0;MQRankSum=-1.381;QD=48.15;ReadPosRankSum=4.969;VQSLOD=5.5431;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.27:0,84,2127	0/0:10,0:10:30.10:0,30,790	0/0:21,0:21:41.70:0,42,1163	0/0:21,0:21:54.18:0,54,1214	0/0:17,0:17:48.16:0,48,1250	0/0:16,0:16:45.15:0,45,1178	0/0:23,0:23:69.24:0,69,1787	0/0:31,0:31:84.27:0,84,2007	1/1:1,21:22:57.20:1049,57,0	0/0:19,0:19:54.18:0,54,1332	0/0:12,0:12:36.12:0,36,951	1/1:2,17:19:45.15:828,45,0	1/1:0,13:13:39.13:717,39,0	0/0:30,0:30:84.29:0,84,2170	0/0:37,0:37:99:0,105,2631	0/0:25,0:25:75.26:0,75,1970	0/0:23,0:23:66.23:0,66,1709	0/0:16,0:16:48.16:0,48,1259	0/0:20,0:20:54.19:0,54,1371	0/0:18,0:18:54.18:0,54,1374	0/0:47,0:47:99:0,138,3493	1/1:1,17:18:51.17:936,51,0	1/1:1,12:14:33.11:607,33,0	1/1:1,23:24:63.22:1159,63,0	0/0:9,0:9:27.09:0,27,713	0/0:21,0:21:57.20:0,57,1503	0/0:24,0:24:72.25:0,72,1864	0/0:11,0:11:33.11:0,33,871
chr10	75252163	.	ATTT	A	3470.35	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.877;DP=573;FS=7.661;HRun=13;HaplotypeScore=97.8205;InbreedingCoeff=0.9868;MQ=72.65;MQ0=0;MQRankSum=-1.200;QD=24.10;ReadPosRankSum=3.831;VQSLOD=2.6285;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,26:33:43.05:705,43,0	0/0:7,0:8:18.02:0,18,278	0/0:15,0:16:9.51:0,10,336	0/0:11,0:11:23.99:0,24,310	0/0:21,0:21:57.13:0,57,947	0/0:25,0:25:66.16:0,66,1109	0/0:23,0:25:63.18:0,63,1105	0/0:34,0:35:84.20:0,84,1407	1/1:2,12:14:33.08:398,33,0	0/0:17,0:19:42.09:0,42,618	0/0:15,0:16:42.12:0,42,767	1/1:3,16:19:38.80:471,39,0	1/1:3,18:21:51.12:619,51,0	0/0:19,0:19:42.10:0,42,739	0/0:18,0:19:48.14:0,48,883	0/0:25,1:26:23.30:0,23,973	0/0:37,0:37:99:0,105,1969	0/0:28,0:30:69.18:0,69,1143	0/0:18,0:19:48.08:0,48,729	0/0:14,0:16:39.12:0,39,685	0/0:11,0:12:24.05:0,24,417	1/1:3,10:13:27:324,27,0	1/1:2,18:21:41.58:499,42,0	1/1:3,19:23:39.01:454,39,0	0/0:21,0:21:57.17:0,57,993	0/0:27,0:27:60.19:0,60,1068	0/0:15,0:15:42.11:0,42,731	0/0:9,0:10:21.04:0,21,324
chr10	75252964	.	T	TCTCTCA	697.18	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=6.474;DP=653;FS=0.696;HRun=0;HaplotypeScore=150.3853;InbreedingCoeff=0.6601;MQ=50.97;MQ0=34;MQRankSum=-3.313;QD=5.86;ReadPosRankSum=-0.216;VQSLOD=2.1739;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:21:2.82:0,3,19	0/0:7,0:7:17.92:0,18,230	0/0:41,0:8:15.75:0,16,137	0/0:38,0:5:6.01:0,6,74	0/0:20,0:20:51.09:0,51,957	0/0:18,0:17:45.40:0,45,555	0/0:25,0:25:60.30:0,60,967	0/0:29,0:26:69.15:0,69,771	1/1:18,0:24:14.54:126,15,0	0/0:22,0:22:62.37:0,62,1094	0/0:11,0:10:26.91:0,27,431	1/1:17,3:21:23.95:373,24,0	1/1:6,8:18:1.74:164,2,0	0/0:40,0:40:99:0,104,1646	0/0:37,0:37:99:0,99,1650	0/0:39,0:37:99:0,99,1604	0/0:28,0:28:75.11:0,75,1125	0/0:21,0:21:33.88:0,34,844	0/0:18,0:14:27.68:0,28,217	0/0:15,0:15:35.74:0,36,453	0/0:40,0:40:99:0,100,1478	./.	1/1:9,0:8:2.99:24,3,0	1/1:7,12:21:2.67:35,3,0	0/1:22,0:22:93.28:124,0,93	0/0:21,0:21:59.97:0,60,980	0/0:17,0:17:41.90:0,42,584	0/0:4,0:3:6:0,6,93
chr10	75252975	.	CAT	C	149.35	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=6.825;DP=664;FS=1.809;HRun=0;HaplotypeScore=99.9593;InbreedingCoeff=0.6348;MQ=51.57;MQ0=21;MQRankSum=-0.632;QD=1.07;ReadPosRankSum=-2.887;VQSLOD=1.5704;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,4:24:5.83:45,6,0	0/0:8,0:8:19.28:0,19,284	0/0:38,0:8:20.08:0,20,318	0/0:20,1:4:12.04:0,12,212	0/0:25,0:25:66.19:0,66,1104	0/0:19,0:19:52.95:0,53,904	0/0:24,0:24:60.14:0,60,1017	0/0:33,0:30:84.21:0,84,1386	1/1:23,0:21:8.12:59,8,0	0/0:24,0:24:61.28:0,61,1050	0/0:13,0:12:32.85:0,33,462	0/1:26,0:24:37.97:38,0,102	0/1:16,0:16:32.89:33,0,49	0/0:39,0:39:99:0,107,1791	0/0:36,0:36:89.96:0,90,1554	0/0:40,0:38:99:0,102,1742	0/0:33,0:33:75.88:0,76,1486	0/0:22,0:22:65.80:0,66,1033	0/0:18,0:17:48.15:0,48,835	0/0:14,0:14:36.12:0,36,654	0/0:50,0:50:99:0,117,1809	1/1:16,0:15:5.99:48,6,0	1/1:9,0:9:8.58:58,9,0	1/1:21,1:22:2.80:23,3,0	0/0:27,0:27:41.81:0,42,746	0/0:21,0:21:57.15:0,57,883	0/0:16,0:16:45.12:0,45,745	0/0:3,0:3:6.02:0,6,116
chr10	75255545	.	TGAC	T	2091.08	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.910;DP=709;FS=0.000;HRun=0;HaplotypeScore=97.8854;InbreedingCoeff=0.9975;MQ=91.39;MQ0=0;MQRankSum=-6.133;QD=39.45;ReadPosRankSum=2.588;VQSLOD=4.7697;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,50:53:99:2186,132,0	0/0:8,0:8:24.08:0,24,522	0/0:33,0:33:96.31:0,96,2036	0/0:25,0:24:62.14:0,62,1218	0/0:29,0:29:81.28:0,81,1823	0/0:19,0:19:57.20:0,57,1289	0/0:30,0:30:81.22:0,81,1736	0/0:30,0:30:90.31:0,90,2015	0/0:14,0:14:39.13:0,39,882	0/0:25,0:24:69.24:0,69,1563	0/0:24,0:24:69.24:0,69,1534	0/0:28,0:28:72.25:0,72,1631	0/0:32,0:32:87.30:0,87,1963	0/0:24,0:24:72.25:0,72,1624	0/0:40,0:39:99:0,114,2578	0/0:27,0:27:81.28:0,81,1810	0/0:38,0:38:99:0,114,2580	0/0:27,0:27:75.26:0,75,1694	0/0:14,0:14:36.12:0,36,815	0/0:25,0:25:63.20:0,63,1382	0/0:20,0:20:57.18:0,57,1241	0/0:21,0:21:63.20:0,63,1380	0/0:27,0:27:78.27:0,78,1763	0/0:15,0:15:45.15:0,45,1019	0/0:17,0:17:51.18:0,51,1156	0/0:24,0:24:69.24:0,69,1562	0/0:28,0:28:78.27:0,78,1764	0/0:12,0:12:33.11:0,33,747
chr10	75256373	.	G	GT	650.61	PASS	AB=0.936;AC=4;AF=0.071;AN=56;BaseQRankSum=3.780;DP=737;FS=3.153;HRun=11;HaplotypeScore=78.1284;InbreedingCoeff=0.3487;MQ=61.54;MQ0=2;MQRankSum=-0.758;QD=6.57;ReadPosRankSum=-1.766;VQSLOD=1.8962;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,30:35:66.13:670,66,0	0/0:13,0:13:32.85:0,33,255	0/0:32,1:16:11.83:0,12,146	0/1:29,0:19:8.31:8,0,94	0/0:28,0:28:29.74:0,30,379	0/0:21,1:22:26.31:0,26,382	0/0:15,0:16:37.85:0,38,281	0/0:21,0:21:16.98:0,17,302	0/0:20,0:21:36.69:0,37,280	0/0:35,0:36:77.90:0,78,582	0/0:24,0:26:41.18:0,41,432	0/0:24,0:24:2.26:0,2,272	0/0:31,0:31:51.63:0,52,555	0/0:20,0:21:52.18:0,52,377	0/0:32,1:33:53.01:0,53,574	0/0:34,0:34:95.11:0,95,720	0/0:36,0:40:58.66:0,59,597	0/0:25,1:28:0.29:0,0,317	0/1:28,4:34:83.51:84,0,335	0/0:42,0:42:36.27:0,36,608	0/0:14,0:14:35.49:0,35,274	0/0:25,0:26:22.66:0,23,343	0/0:22,0:23:41.73:0,42,316	0/0:20,1:21:14.25:0,14,288	0/0:32,0:32:30.26:0,30,468	0/0:23,0:23:18.21:0,18,331	0/0:23,0:23:16.79:0,17,283	0/0:6,0:6:14.61:0,15,103
chr10	75259564	.	G	GAAGG	2249.29	PASS	AB=1.000;AC=13;AF=0.250;AN=52;BaseQRankSum=14.166;DP=538;FS=5.775;HRun=0;HaplotypeScore=138.2214;InbreedingCoeff=0.8778;MQ=52.59;MQ0=9;MQRankSum=-5.998;QD=15.00;ReadPosRankSum=-0.854;VQSLOD=2.4917;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:18:25.36:184,25,0	0/0:5,0:5:8.03:0,8,86	./.	./.	0/0:26,0:26:55.76:0,56,856	0/0:28,0:28:57.23:0,57,665	0/0:14,0:13:5.99:0,6,280	0/0:20,0:19:41.96:0,42,492	1/1:16,13:29:35.71:290,36,0	0/0:25,0:25:66.06:0,66,944	0/0:4,0:4:9.02:0,9,107	1/1:30,0:30:71.54:605,72,0	1/1:29,0:29:74.98:662,75,0	0/0:28,0:28:78.20:0,78,1191	0/0:23,0:23:60.14:0,60,876	0/0:38,0:38:79.15:0,79,1479	0/0:21,0:21:38.83:0,39,703	0/0:28,0:28:62.90:0,63,740	0/0:19,0:17:35.99:0,36,412	0/0:14,0:14:36.05:0,36,490	0/0:20,0:19:57.08:0,57,744	1/1:15,0:15:29.71:254,30,0	1/1:13,0:12:35.55:248,36,0	0/1:14,0:14:3.22:190,0,3	0/0:23,0:23:41.78:0,42,845	0/0:18,0:18:48.13:0,48,732	0/0:20,0:19:57.13:0,57,887	0/0:5,0:5:8.98:0,9,98
chr10	75259580	.	G	GA	193.64	PASS	AB=0.973;AC=7;AF=0.135;AN=52;BaseQRankSum=9.006;DP=529;FS=1.247;HRun=3;HaplotypeScore=107.4691;InbreedingCoeff=-0.0026;MQ=52.32;MQ0=9;MQRankSum=1.665;QD=1.96;ReadPosRankSum=-0.726;VQSLOD=-0.5897;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,3:18:19.52:20,0,74	1/1:3,0:3:0.30:1,0,0	./.	./.	0/0:24,0:24:44.35:0,44,510	0/0:24,0:24:32.86:0,33,347	0/0:13,0:12:29.67:0,30,288	0/0:29,0:28:57.17:0,57,677	0/0:27,0:26:34.75:0,35,397	0/0:21,0:21:57.16:0,57,666	0/0:3,0:3:9.03:0,9,108	0/1:28,0:28:99:112,0,245	0/1:25,0:25:78.62:128,0,79	0/0:30,0:30:84.26:0,84,1006	0/0:26,0:26:75.23:0,75,900	0/0:38,0:38:89.79:0,90,1195	0/0:21,0:21:60.18:0,60,719	0/0:25,1:26:37.21:0,37,780	0/0:23,0:21:63.01:0,63,723	0/0:13,0:13:29.91:0,30,327	0/0:26,0:25:75.21:0,75,887	0/1:11,0:11:21.10:21,0,90	0/1:13,0:12:26.86:27,0,151	0/0:12,0:12:15.52:0,16,166	0/0:21,0:21:60.16:0,60,696	0/0:19,0:19:57.17:0,57,683	0/0:18,0:17:54.15:0,54,635	0/0:7,0:7:15.05:0,15,180
chr10	75259615	.	AG	A	1088.57	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=13.094;DP=524;FS=10.960;HRun=2;HaplotypeScore=93.6427;InbreedingCoeff=0.8282;MQ=54.51;MQ0=1;MQRankSum=-5.198;QD=8.71;ReadPosRankSum=1.937;VQSLOD=0.2407;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,10:27:15.26:259,15,0	0/0:4,0:4:12:0,12,118	0/0:13,0:9:24.08:0,24,352	0/0:5,0:5:15.05:0,15,218	0/0:14,0:14:41.71:0,42,403	0/0:23,0:23:60.79:0,61,609	0/0:22,0:21:39.79:0,40,699	0/0:37,0:37:99:0,108,1497	1/1:11,17:27:39.85:256,40,0	0/0:13,0:13:39.13:0,39,566	0/0:4,0:4:12.04:0,12,178	1/1:11,9:20:39.06:271,39,0	1/1:8,12:20:22.95:265,23,0	0/0:28,0:28:84.28:0,84,1240	0/0:28,0:28:78.26:0,78,1143	0/0:33,0:33:99:0,99,1403	0/0:25,0:25:75.24:0,75,1091	0/0:27,0:27:81.26:0,81,1183	0/0:25,0:24:71.55:0,72,984	0/0:11,0:11:32.60:0,33,453	0/0:36,0:35:99:0,102,1515	1/1:3,3:6:11.86:80,12,0	0/1:8,0:7:36.55:48,0,37	1/1:12,3:15:1.64:89,2,0	0/0:15,0:15:42.14:0,42,626	0/0:16,0:16:48.16:0,48,709	0/0:15,0:14:45.10:0,45,609	0/0:5,0:5:15.05:0,15,224
chr10	75259619	.	AGGAAGGC	A	3990.94	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=13.158;DP=533;FS=1.861;HRun=0;HaplotypeScore=150.7103;InbreedingCoeff=0.7378;MQ=56.09;MQ0=1;MQRankSum=-7.053;QD=31.93;ReadPosRankSum=1.094;VQSLOD=3.6835;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,5:29:60.02:1177,60,0	0/0:5,0:5:15.05:0,15,546	0/0:15,0:11:33.11:0,33,1009	0/0:6,0:6:18.06:0,18,631	0/0:14,0:14:42.14:0,42,1447	0/0:24,0:24:72.25:0,72,2462	0/0:22,0:21:57.12:0,57,1680	0/0:35,0:35:99:0,105,3056	1/1:25,0:24:62.40:647,62,0	0/0:13,0:13:39.13:0,39,1308	0/0:5,0:5:15.05:0,15,523	1/1:24,0:24:23.76:676,24,0	1/1:10,10:20:51.15:1015,51,0	0/0:27,0:27:81.25:0,81,2714	0/0:25,0:25:75.23:0,75,2645	0/0:33,0:33:99:0,99,3437	0/0:28,0:28:84.29:0,84,2760	0/0:27,0:27:81.28:0,81,2824	0/0:27,0:26:78.27:0,78,2649	0/0:12,0:12:36.12:0,36,1216	0/0:41,0:40:99:0,120,4009	0/1:5,0:5:0.02:47,0,0	0/1:8,0:7:99:135,0,133	0/1:14,0:14:6.74:294,0,7	0/0:15,0:15:45.15:0,45,1486	0/0:17,0:17:51.18:0,51,1731	0/0:12,0:11:36.12:0,36,1278	0/0:5,0:5:15.05:0,15,629
chr10	75259623	.	AGGC	A	3103.47	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=13.896;DP=530;FS=1.318;HRun=0;HaplotypeScore=108.6675;InbreedingCoeff=0.9001;MQ=60.43;MQ0=1;MQRankSum=-6.475;QD=25.65;ReadPosRankSum=1.867;VQSLOD=3.6806;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,5:27:71.88:777,72,0	0/0:6,0:6:18.06:0,18,405	0/0:19,0:14:42.14:0,42,897	0/0:7,0:7:21.07:0,21,489	0/0:12,0:12:36.12:0,36,831	0/0:24,0:24:72.14:0,72,1582	0/0:22,0:21:54.18:0,54,1235	0/0:36,0:36:99:0,108,2333	1/1:7,17:24:65.88:706,66,0	0/0:12,0:12:36.12:0,36,767	0/0:5,0:5:15.05:0,15,357	1/1:13,9:22:56.82:684,57,0	1/1:18,2:20:36.42:578,36,0	0/0:24,0:24:72.24:0,72,1723	0/0:24,0:24:72.23:0,72,1647	0/0:33,0:33:99:0,99,2221	0/0:28,0:28:84.24:0,84,1852	0/0:29,0:29:84.20:0,84,1970	0/0:28,0:28:84.20:0,84,1907	0/0:12,0:12:36.11:0,36,827	0/0:40,0:39:99:0,117,2707	1/1:2,3:5:12.04:167,12,0	0/1:8,0:7:7.89:113,0,8	1/1:12,3:15:18.18:268,18,0	0/0:12,0:12:36.12:0,36,839	0/0:18,0:18:54.18:0,54,1238	0/0:12,0:11:36.12:0,36,812	0/0:6,0:6:18.06:0,18,416
chr10	75266128	.	G	GCAGC	522.31	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.349;DP=437;FS=7.141;HRun=0;HaplotypeScore=79.0742;InbreedingCoeff=0.8857;MQ=81.54;MQ0=0;MQRankSum=-1.497;QD=40.18;ReadPosRankSum=0.619;VQSLOD=3.3985;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,8:13:27.08:616,27,0	0/0:9,0:9:24.07:0,24,374	0/0:16,0:16:23.29:0,23,351	0/0:18,0:18:16.86:0,17,225	0/0:10,0:10:18.06:0,18,300	0/0:12,0:12:27.09:0,27,443	0/0:23,0:23:54.17:0,54,877	0/0:19,0:19:20.19:0,20,348	0/0:15,0:15:39.13:0,39,652	0/0:10,0:10:15.05:0,15,233	0/0:9,0:9:18.05:0,18,285	0/0:21,0:21:42.13:0,42,677	0/0:17,0:17:30.10:0,30,497	0/0:20,0:20:42.01:0,42,634	0/0:33,0:33:78.26:0,78,1248	0/0:16,0:16:36.12:0,36,584	0/0:28,0:28:60.19:0,60,956	0/0:12,0:11:33.11:0,33,523	0/0:12,0:12:27.08:0,27,426	0/0:11,0:11:21.06:0,21,328	0/0:15,0:15:21.07:0,21,333	0/0:9,0:9:15.05:0,15,251	0/0:6,0:6:15.05:0,15,251	0/0:24,0:23:51.17:0,51,852	0/0:8,0:8:12.04:0,12,188	0/0:12,0:12:24.07:0,24,374	0/0:23,0:23:54.18:0,54,898	0/0:16,0:16:48.16:0,48,803
chr10	75266232	.	A	AG	538.15	PASS	AB=0.883;AC=19;AF=0.339;AN=56;BaseQRankSum=0.221;DP=465;FS=0.000;HRun=11;HaplotypeScore=98.0308;InbreedingCoeff=0.2160;MQ=81.57;MQ0=1;MQRankSum=0.769;QD=2.45;ReadPosRankSum=-2.281;VQSLOD=-0.5036;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:18:2.97:20,3,0	0/0:6,0:6:5.65:0,6,45	0/0:30,0:26:3.54:0,4,180	0/1:25,0:23:23.04:23,0,33	1/1:9,2:11:6.01:61,6,0	0/0:8,0:8:5.94:0,6,46	0/0:17,1:19:25.88:0,26,191	0/0:19,0:19:2.88:0,3,23	0/1:9,7:16:31.43:76,0,31	0/1:18,2:20:14.61:15,0,17	0/1:8,0:8:0:0,0,0	0/1:10,9:19:8.19:107,0,8	0/1:18,0:18:31.52:49,0,32	0/0:11,0:11:2.89:0,3,20	0/0:24,0:25:37.73:0,38,278	0/1:10,10:20:4.68:134,0,5	0/0:15,0:17:15.96:0,16,104	0/0:18,0:20:34.83:0,35,257	0/0:10,0:11:7.70:0,8,37	0/0:9,0:9:8.82:0,9,56	0/0:25,0:25:17.67:0,18,124	1/1:10,2:12:3.01:30,3,0	0/1:7,0:5:0:0,0,0	1/1:9,7:16:11.61:121,12,0	1/1:11,6:17:5.95:48,6,0	0/0:16,0:16:12.26:0,12,80	0/0:27,0:29:14.24:0,14,194	0/1:12,0:12:10.14:10,0,60
chr10	75266917	.	TG	T	3769.63	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.607;DP=590;FS=2.696;HRun=7;HaplotypeScore=69.5340;InbreedingCoeff=0.9738;MQ=62.21;MQ0=0;MQRankSum=-2.516;QD=23.86;ReadPosRankSum=1.194;VQSLOD=3.9879;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,28:34:84.12:844,84,0	0/0:10,0:10:24.08:0,24,298	0/0:9,0:8:12.04:0,12,151	0/0:6,0:4:6.02:0,6,74	0/0:18,0:18:51.16:0,51,640	0/0:18,0:18:51.13:0,51,614	0/0:27,0:27:69.19:0,69,840	0/0:30,0:30:84.23:0,84,1019	1/1:1,22:23:54.12:551,54,0	0/0:23,0:23:66.19:0,66,798	0/0:21,0:21:63.19:0,63,779	1/1:2,14:16:45.09:452,45,0	1/1:5,14:19:45.09:459,45,0	0/0:24,0:24:69.20:0,69,843	0/0:25,0:25:72.23:0,72,903	0/0:19,0:19:57.18:0,57,717	0/0:36,0:36:96.31:0,96,1205	0/0:21,0:21:60.16:0,60,738	0/0:19,0:19:54.15:0,54,662	0/0:29,0:29:66.21:0,66,825	0/0:30,0:30:84.23:0,84,1015	1/1:3,19:22:57.13:580,57,0	1/1:3,20:23:45.09:452,45,0	1/1:7,14:21:45.49:433,45,0	0/0:16,0:16:45.13:0,45,552	0/0:22,1:23:32.58:0,33,724	0/0:21,0:21:57.18:0,57,717	0/0:7,0:7:18.05:0,18,215
chr10	75266963	.	TAA	T	2455.15	PASS	AB=0.556;AC=13;AF=0.232;AN=56;BaseQRankSum=10.587;DP=618;FS=0.862;HRun=13;HaplotypeScore=95.7293;InbreedingCoeff=0.8947;MQ=69.84;MQ0=2;MQRankSum=-2.299;QD=16.70;ReadPosRankSum=2.068;VQSLOD=3.0436;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,3:30:27.87:28,0,128	0/0:8,0:9:21.07:0,21,288	0/0:29,0:20:18.85:0,19,197	0/0:19,0:12:15.82:0,16,142	0/0:25,1:28:35.57:0,36,768	0/0:14,0:15:42.12:0,42,575	0/0:18,0:20:56.15:0,56,738	0/0:25,0:27:59.16:0,59,779	1/1:5,16:21:48.05:466,48,0	0/0:17,0:18:42.04:0,42,532	0/0:20,0:20:48.15:0,48,665	1/1:2,12:15:38.78:361,39,0	1/1:5,14:19:48.01:450,48,0	0/0:23,0:24:59.68:0,60,819	0/0:26,0:30:80.71:0,81,1054	0/0:15,0:16:41.63:0,42,573	0/0:31,0:33:74.13:0,74,949	0/0:22,0:24:59.60:0,60,768	0/0:25,1:28:39.40:0,39,803	0/0:31,0:32:81.24:0,81,1121	0/0:12,0:14:32.57:0,33,391	1/1:5,17:22:51.01:495,51,0	1/1:4,16:22:44.77:469,45,0	1/1:2,16:18:38.73:378,39,0	0/0:22,0:24:63.20:0,63,889	0/0:26,0:27:59.67:0,60,806	0/0:25,0:27:66.20:0,66,920	0/0:7,0:7:21.07:0,21,304
chr10	75267054	.	CTT	C	5453.95	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=17.076;DP=668;FS=3.721;HRun=2;HaplotypeScore=104.6136;InbreedingCoeff=0.9999;MQ=74.58;MQ0=0;MQRankSum=-5.503;QD=38.68;ReadPosRankSum=4.545;VQSLOD=5.0902;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:39.13:574,39,0	0/0:21,0:21:63.22:0,63,1280	0/0:20,0:20:57.20:0,57,1124	0/0:19,0:19:54.16:0,54,977	0/0:26,0:26:78.27:0,78,1580	0/0:26,0:26:78.27:0,78,1585	0/0:27,0:27:81.28:0,81,1642	0/0:33,0:33:99:0,99,1954	1/1:0,18:18:54.18:794,54,0	0/0:25,0:25:74.47:0,74,1459	0/0:24,0:24:72.25:0,72,1463	1/1:1,17:18:51.17:750,51,0	1/1:1,19:20:57.19:838,57,0	0/0:29,0:29:87.30:0,87,1755	0/0:24,0:24:69.22:0,69,1365	0/0:25,0:25:75.26:0,75,1525	0/0:25,0:25:72.25:0,72,1463	0/0:27,0:27:81.28:0,81,1645	0/0:24,0:24:72.25:0,72,1453	0/0:30,0:30:90.30:0,90,1785	0/0:22,0:22:66.23:0,66,1340	1/1:1,29:30:81.26:1173,81,0	1/1:0,22:22:57.19:840,57,0	1/1:0,17:17:32.68:485,33,0	0/0:26,0:26:75.26:0,75,1525	0/0:29,0:29:84.29:0,84,1701	0/0:34,0:34:99:0,102,2070	0/0:11,0:11:33.11:0,33,671
chr10	75269501	.	G	GTCCTCCTCCTCC	3853.25	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=0.339;DP=674;FS=19.168;HRun=0;HaplotypeScore=221.9019;InbreedingCoeff=0.8194;MQ=72.10;MQ0=0;MQRankSum=-8.506;QD=27.33;ReadPosRankSum=-1.551;VQSLOD=1.4781;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:78.27:0,78,2685	0/0:8,0:8:9.03:0,9,314	0/0:33,0:21:26.12:0,26,555	0/0:31,0:27:13.27:0,13,262	0/0:36,0:36:75.26:0,75,2458	0/0:23,0:23:57.20:0,57,1934	0/0:22,0:22:57.11:0,57,1661	0/0:34,0:34:45.11:0,45,1063	1/1:9,7:16:27.09:1447,27,0	0/0:32,0:32:54.18:0,54,1828	0/0:17,0:17:45.14:0,45,1323	1/1:16,6:23:9.92:515,10,0	1/1:13,2:15:12.04:596,12,0	0/0:23,0:23:54.17:0,54,1738	0/0:17,0:17:48.14:0,48,1480	0/0:25,0:25:48.14:0,48,1472	0/0:11,0:11:3.37:0,3,758	0/1:14,0:13:18.36:18,0,893	0/0:22,0:22:42.14:0,42,1351	0/0:29,0:29:72.23:0,72,2349	0/0:34,0:34:63.20:0,63,1911	1/1:16,2:19:9.03:253,9,0	1/1:19,2:21:12.04:566,12,0	1/1:28,4:33:15:458,15,0	0/0:19,0:19:42.14:0,42,1428	0/0:31,0:31:75.17:0,75,2030	0/0:26,0:25:69.22:0,69,2173	0/0:22,0:22:48.16:0,48,1556
chr10	75270162	.	T	TAAA	4802.35	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.905;DP=717;FS=1.270;HRun=10;HaplotypeScore=111.7543;InbreedingCoeff=0.9054;MQ=66.27;MQ0=1;MQRankSum=-3.166;QD=24.25;ReadPosRankSum=-1.182;VQSLOD=3.3210;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:31:55.51:430,56,0	0/0:19,0:19:48.12:0,48,571	0/0:40,0:24:20.87:0,21,326	0/1:36,0:24:42.09:42,0,279	0/0:26,0:26:68.78:0,69,809	0/0:21,0:23:58.39:0,58,683	0/0:12,0:12:33.07:0,33,386	0/0:36,0:36:71.50:0,72,809	1/1:4,16:22:36.08:620,36,0	0/0:29,0:30:79.56:0,80,943	0/0:34,0:35:90.12:0,90,1064	1/1:1,16:19:45.15:828,45,0	1/1:3,16:19:42.14:807,42,0	0/0:20,0:20:57.09:0,57,660	0/0:26,0:27:64.46:0,64,786	0/0:26,0:26:72.17:0,72,861	0/0:20,0:21:51.03:0,51,585	0/0:26,0:26:72.12:0,72,842	0/0:18,0:18:39.06:0,39,460	0/0:27,0:27:54.04:0,54,631	0/0:7,0:7:15.04:0,15,182	1/1:3,16:21:45.02:699,45,0	1/1:3,19:24:53.07:789,53,0	1/1:5,16:24:32.70:587,33,0	0/0:33,0:33:90.21:0,90,1054	0/0:41,0:41:99:0,105,1227	0/0:39,0:39:99:0,99,1191	0/0:12,0:12:33.10:0,33,401
chr10	75270765	.	GAC	G	804.93	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=9.766;DP=714;FS=14.687;HRun=0;HaplotypeScore=126.9936;InbreedingCoeff=0.5790;MQ=56.68;MQ0=22;MQRankSum=-0.725;QD=4.60;ReadPosRankSum=-3.283;VQSLOD=1.4387;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:21:50.41:50,0,198	0/0:5,0:5:15.05:0,15,275	0/0:17,0:9:16.26:0,16,143	0/0:33,0:10:6.93:0,7,132	0/0:22,0:22:57.11:0,57,956	0/0:23,0:23:63.12:0,63,961	0/0:31,0:31:87.05:0,87,1344	0/0:32,0:28:84.20:0,84,1344	1/1:14,4:18:25.43:189,25,0	0/0:41,0:39:99:0,111,1800	0/0:21,0:21:46.88:0,47,692	1/1:28,2:30:8.63:201,9,0	0/1:27,0:27:72.77:148,0,73	0/0:16,0:16:36.07:0,36,565	0/0:35,0:35:96.25:0,96,1582	0/0:31,0:30:87.20:0,87,1487	0/0:31,0:31:55.06:0,55,1109	0/0:40,0:40:99:0,100,1905	0/0:23,0:17:48.14:0,48,809	0/0:24,0:23:60.08:0,60,872	0/0:39,0:35:97.48:0,97,1573	1/1:21,3:22:8.64:74,9,0	1/1:23,2:24:26.46:203,26,0	0/1:28,0:27:47.25:103,0,47	0/0:21,0:21:57.17:0,57,968	0/0:29,0:29:78.22:0,78,1359	0/0:23,0:23:60.17:0,60,1001	0/0:1,0:1:2.99:0,3,23
chr10	75270767	.	CACAGAG	C	2247.14	PASS	AB=0.873;AC=12;AF=0.214;AN=56;BaseQRankSum=9.740;DP=698;FS=17.968;HRun=0;HaplotypeScore=163.9604;InbreedingCoeff=0.7555;MQ=55.34;MQ0=20;MQRankSum=-0.956;QD=12.99;ReadPosRankSum=-3.618;VQSLOD=1.0246;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,3:21:99:140,0,243	0/0:5,0:5:15.05:0,15,505	0/0:12,0:7:13.10:0,13,131	0/0:28,0:8:7.94:0,8,145	0/0:23,0:23:60.21:0,60,1467	0/0:24,0:24:66.21:0,66,1508	0/0:31,0:31:87.09:0,87,1929	0/0:32,0:28:84.27:0,84,1568	1/1:12,5:17:30.10:597,30,0	0/0:41,0:39:99:0,111,2836	0/0:21,0:21:49.91:0,50,1123	1/1:19,10:29:23.08:485,23,0	1/1:20,6:26:35.89:461,36,0	0/0:17,0:17:39.11:0,39,1066	0/0:32,0:32:96.28:0,96,2341	0/0:30,0:29:87.28:0,87,2546	0/0:31,0:31:55.05:0,55,1848	0/0:39,0:39:99:0,114,3101	0/0:24,0:18:51.17:0,51,1258	0/0:23,0:22:63.14:0,63,1463	0/0:39,0:35:99:0,102,2571	0/1:21,4:23:7.10:109,0,7	1/1:19,6:24:27.01:400,27,0	1/1:22,6:27:21.43:234,21,0	0/0:20,0:20:57.17:0,57,1542	0/0:30,0:30:81.28:0,81,2120	0/0:22,0:22:60.20:0,60,1721	0/0:1,0:1:2.99:0,3,23
chr10	75270785	.	GAGAGAGAC	G	1146.33	PASS	AB=1.000;AC=13;AF=0.250;AN=52;BaseQRankSum=6.905;DP=680;FS=8.717;HRun=0;HaplotypeScore=195.5759;InbreedingCoeff=0.7911;MQ=50.82;MQ0=22;MQRankSum=-0.447;QD=6.66;ReadPosRankSum=-3.596;VQSLOD=0.5474;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:32.46:32,0,173	0/0:5,0:5:15.05:0,15,425	./.	./.	0/0:27,0:27:63.22:0,63,1946	0/0:21,0:21:51.16:0,51,1736	0/0:27,0:26:66.06:0,66,2068	0/0:42,0:39:99:0,100,2219	1/1:17,1:18:11.79:157,12,0	0/0:41,0:39:99:0,99,2972	0/0:15,0:15:36.05:0,36,1072	1/1:18,8:26:7.26:280,7,0	1/1:13,9:22:13.11:195,13,0	0/0:16,0:16:42.13:0,42,1275	0/0:26,0:26:62.92:0,63,2135	0/0:29,0:29:84.27:0,84,2612	0/0:29,0:31:22.49:0,22,2079	0/0:41,0:41:71.99:0,72,3243	0/0:30,0:23:66.18:0,66,1844	0/0:23,0:22:57.17:0,57,1886	0/0:36,0:32:80.23:0,80,2706	1/1:17,10:26:12.01:296,12,0	1/1:17,3:19:0.43:59,0,0	1/1:25,6:28:17.88:295,18,0	0/0:24,0:24:69.21:0,69,2096	0/0:31,0:30:78.26:0,78,2462	0/0:25,0:25:69.24:0,69,2113	0/0:3,0:3:9.03:0,9,196
chr10	75270791	.	GAC	G	434.17	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=9.379;DP=667;FS=2.264;HRun=0;HaplotypeScore=128.5155;InbreedingCoeff=0.9407;MQ=50.94;MQ0=20;MQRankSum=-1.055;QD=3.15;ReadPosRankSum=-2.892;VQSLOD=1.7730;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:11.42:0,11,103	0/0:6,0:6:18.03:0,18,279	./.	./.	0/0:25,0:25:66.15:0,66,1102	0/0:23,0:23:63.13:0,63,1021	0/0:26,0:25:66.03:0,66,1129	0/0:40,0:38:99:0,108,1562	1/1:17,0:17:12.36:99,12,0	0/0:38,0:36:99:0,105,1648	0/0:18,0:18:42.01:0,42,633	1/1:25,1:26:17.95:152,18,0	1/1:22,0:22:11.11:75,11,0	0/0:16,0:16:42.09:0,42,672	0/0:23,0:23:68.89:0,69,1126	0/0:30,0:30:87:0,87,1444	0/0:30,0:30:37.34:0,37,1074	0/0:37,1:38:55.59:0,56,1655	0/0:29,0:24:49.91:0,50,1019	0/0:23,0:22:59.82:0,60,991	0/0:38,0:35:69.14:0,69,1366	1/1:26,0:25:11.38:74,11,0	1/1:18,0:17:8.65:73,9,0	1/1:27,2:26:17.44:134,17,0	0/0:26,0:26:75.20:0,75,1292	0/0:28,0:27:78.24:0,78,1356	0/0:26,0:26:72.18:0,72,1227	0/0:3,0:3:9.03:0,9,173
chr10	75270793	.	C	CAGAG	1293.54	PASS	AC=14;AF=0.269;AN=52;BaseQRankSum=8.454;DP=669;FS=5.154;HRun=0;HaplotypeScore=153.8918;InbreedingCoeff=0.9515;MQ=51.14;MQ0=19;MQRankSum=-1.197;QD=8.08;ReadPosRankSum=-3.126;VQSLOD=2.1015;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,5:24:11.79:273,12,0	0/0:6,0:6:15.02:0,15,193	./.	./.	0/0:27,0:27:56.19:0,56,868	0/0:23,0:23:60.16:0,60,932	0/0:29,0:28:66.15:0,66,1011	0/0:41,0:39:90.06:0,90,1368	1/1:17,0:17:14.41:177,14,0	0/0:38,0:37:90.20:0,90,1441	0/0:17,0:17:36.08:0,36,530	1/1:25,0:25:19.33:252,19,0	1/1:22,0:22:16.47:192,16,0	0/0:17,0:17:33.09:0,33,532	0/0:23,0:23:54.15:0,54,863	0/0:30,0:30:78.11:0,78,1130	0/0:29,0:30:32.44:0,32,894	0/0:37,0:37:77.05:0,77,1372	0/0:27,0:23:56.41:0,56,897	0/0:23,0:22:57.19:0,57,919	0/0:39,0:36:77.39:0,77,1248	1/1:25,0:25:11.34:203,11,0	1/1:17,0:16:8.67:111,9,0	1/1:27,1:25:15.02:272,15,0	0/0:26,0:26:55.05:0,55,1028	0/0:28,0:27:54.18:0,54,919	0/0:27,0:27:62.20:0,62,964	0/0:3,0:3:9.03:0,9,154
chr10	75270861	.	C	CAG	5222.14	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-4.100;DP=806;FS=0.388;HRun=0;HaplotypeScore=108.9133;InbreedingCoeff=0.8975;MQ=57.48;MQ0=30;MQRankSum=1.899;QD=27.34;ReadPosRankSum=1.330;VQSLOD=6.2110;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,25:29:51.11:853,51,0	0/0:10,0:10:30.08:0,30,367	0/0:44,0:8:17.96:0,18,202	0/0:66,0:17:2.46:0,2,92	0/0:31,0:31:75.24:0,75,952	0/0:23,0:24:60.01:0,60,726	0/0:26,0:26:59.97:0,60,708	0/0:43,0:42:90.26:0,90,1113	1/1:3,25:27:54.05:868,54,0	0/0:34,0:34:90.27:0,90,1124	0/0:17,0:17:47.81:0,48,596	1/1:6,25:30:19.56:848,20,0	1/1:2,19:21:45.15:752,45,0	0/0:20,0:20:51.08:0,51,628	0/0:32,0:32:93.30:0,93,1183	0/0:31,0:31:90.28:0,90,1127	0/0:24,0:24:20.57:0,21,579	0/0:36,0:36:76.51:0,77,1018	0/0:24,0:20:48.10:0,48,578	0/0:35,0:35:87.27:0,87,1092	0/0:38,0:38:86.89:0,87,1045	1/1:6,21:27:6.98:665,7,0	1/1:9,11:19:42.14:699,42,0	1/1:12,21:31:0.99:538,1,0	0/0:19,0:20:59.98:0,60,697	0/0:30,0:30:72.20:0,72,880	0/0:23,0:23:66.16:0,66,806	0/0:5,0:5:12.04:0,12,153
chr10	75271115	.	AAG	A	4675.08	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.096;DP=847;FS=5.178;HRun=0;HaplotypeScore=120.9975;InbreedingCoeff=0.9815;MQ=57.26;MQ0=80;MQRankSum=0.407;QD=30.16;ReadPosRankSum=3.040;VQSLOD=6.9089;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,111,1940	0/0:8,0:8:24.08:0,24,440	0/0:41,0:8:7.34:0,7,189	0/0:63,0:10:18.80:0,19,217	0/0:26,0:26:69.22:0,69,1206	0/0:30,0:30:90.31:0,90,1639	0/0:18,0:18:51.17:0,51,910	0/0:46,0:28:72.24:0,72,1186	1/1:2,23:24:63.17:874,63,0	0/0:42,0:40:99:0,114,1995	0/0:18,0:18:48.14:0,48,842	1/1:2,22:22:57.11:770,57,0	1/1:3,21:21:54.15:751,54,0	0/0:16,0:16:48.16:0,48,879	0/0:38,0:38:99:0,114,2017	0/0:20,0:20:57.19:0,57,1001	0/0:49,0:49:99:0,119,2227	0/0:26,0:26:60.16:0,60,1173	0/0:34,0:24:60.21:0,60,1048	0/0:28,0:28:75.23:0,75,1284	0/0:46,0:45:99:0,122,2042	1/1:3,28:27:78.23:1095,78,0	1/1:4,10:11:24.07:328,24,0	1/1:2,35:36:58.42:856,58,0	0/0:21,0:18:54.18:0,54,929	0/0:40,0:37:99:0,108,1898	0/0:26,0:26:75.05:0,75,1350	0/0:13,0:13:39.13:0,39,690
chr10	75271185	.	TAGAC	T	5159.46	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.651;DP=825;FS=4.163;HRun=0;HaplotypeScore=159.8934;InbreedingCoeff=0.9999;MQ=68.88;MQ0=5;MQRankSum=-0.622;QD=36.59;ReadPosRankSum=3.523;VQSLOD=5.1891;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:99:0,126,3140	0/0:12,0:12:36.11:0,36,844	0/0:42,0:29:45.05:0,45,1205	0/0:71,0:49:55.17:0,55,1737	0/0:25,0:25:72.25:0,72,1726	0/0:28,0:28:81.24:0,81,2005	0/0:18,0:18:51.16:0,51,1209	0/0:60,0:60:99:0,162,3585	1/1:4,19:22:51.17:937,51,0	0/0:24,0:24:72.25:0,72,1780	0/0:15,0:15:42.01:0,42,945	1/1:6,15:20:45.15:808,45,0	1/1:5,24:27:47.10:819,47,0	0/0:15,0:15:42.07:0,42,919	0/0:34,0:34:99:0,102,2623	0/0:29,0:29:84.27:0,84,2057	0/0:39,0:39:96.73:0,97,2304	0/0:22,0:22:57.17:0,57,1385	0/0:27,0:26:75.23:0,75,1607	0/0:25,0:25:72.25:0,72,1730	0/0:38,0:37:95.97:0,96,2297	1/1:6,16:22:60.03:1056,60,0	1/1:5,15:20:40.02:714,40,0	1/1:8,18:26:45.15:826,45,0	0/0:24,0:24:69.24:0,69,1807	0/0:33,0:33:96.32:0,96,2357	0/0:30,0:30:87.28:0,87,2119	0/0:20,0:20:57.20:0,57,1468
chr10	75271723	.	CT	C	4813.38	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.244;DP=653;FS=1.217;HRun=1;HaplotypeScore=70.2312;InbreedingCoeff=0.9981;MQ=76.48;MQ0=1;MQRankSum=-2.205;QD=32.52;ReadPosRankSum=2.704;VQSLOD=4.6644;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,35:36:82.11:1206,82,0	0/0:6,0:6:18.01:0,18,185	0/0:16,1:17:26.13:0,26,481	0/0:23,0:22:53.79:0,54,636	0/0:23,0:23:69.16:0,69,892	0/0:19,0:19:57.13:0,57,757	0/0:17,0:17:51.14:0,51,693	0/0:27,0:27:75.19:0,75,986	1/1:0,17:17:33.11:460,33,0	0/0:36,0:36:99:0,99,1383	0/0:13,0:13:39.12:0,39,536	1/1:0,18:18:42.14:586,42,0	1/1:0,18:18:42.14:585,42,0	0/0:28,0:28:81.25:0,81,1134	0/0:27,0:27:81.26:0,81,1137	0/0:20,0:20:60.15:0,60,801	0/0:29,0:29:87.29:0,87,1243	0/0:20,0:20:57.14:0,57,773	0/0:19,0:19:54.08:0,54,703	0/0:21,0:21:57.16:0,57,777	0/0:59,0:58:99:0,175,2424	1/1:2,27:29:69.11:911,69,0	1/1:0,13:13:30.10:418,30,0	1/1:1,16:17:48.09:646,48,0	0/0:28,0:28:84.21:0,84,1130	0/0:28,0:28:84.24:0,84,1137	0/0:26,0:25:78.26:0,78,1112	0/0:19,0:19:57.17:0,57,788
chr10	75272483	.	TACACAC	T	3893.71	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.158;DP=698;FS=7.356;HRun=0;HaplotypeScore=146.3659;InbreedingCoeff=0.9814;MQ=60.13;MQ0=13;MQRankSum=-12.495;QD=23.18;ReadPosRankSum=3.047;VQSLOD=2.7650;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,1:32:22.49:250,22,0	0/0:14,0:14:30.10:0,30,891	0/0:35,0:19:12:0,12,291	0/0:36,0:21:15.03:0,15,343	0/0:25,0:25:54.13:0,54,1613	0/0:22,0:22:42.14:0,42,1186	0/0:26,0:26:42.14:0,42,1181	0/0:21,0:21:30.09:0,30,839	1/1:7,15:22:30.10:631,30,0	0/0:35,0:37:84.22:0,84,2120	0/0:12,0:11:30.05:0,30,779	1/1:6,21:29:51.04:1019,51,0	1/1:3,19:22:30.10:601,30,0	0/0:15,0:18:33.11:0,33,898	0/0:22,0:23:39.13:0,39,1226	0/0:25,0:25:59.23:0,59,1790	0/0:36,0:36:90.31:0,90,2690	0/0:22,0:27:69.23:0,69,1762	0/0:18,0:18:30.10:0,30,770	0/0:18,0:20:42.13:0,42,1132	0/0:59,0:60:99:0,138,3924	1/1:7,14:20:30.10:615,30,0	1/1:6,11:17:24.08:476,24,0	1/1:14,10:24:15.05:303,15,0	0/0:19,0:22:48.16:0,48,1310	0/0:21,0:22:51.18:0,51,1550	0/0:23,0:23:57.20:0,57,1754	0/0:6,0:4:12.04:0,12,381
chr10	75272950	.	C	CACAT	5477.84	PASS	AB=0.631;AC=12;AF=0.214;AN=56;BaseQRankSum=-11.823;DP=656;FS=0.000;HRun=0;HaplotypeScore=98.9074;InbreedingCoeff=0.7979;MQ=59.29;MQ0=5;MQRankSum=4.208;QD=32.80;ReadPosRankSum=2.727;VQSLOD=4.9133;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,17:46:39.13:940,39,0	0/0:9,0:9:24.08:0,24,386	0/0:23,0:17:9.03:0,9,143	0/0:35,0:26:24.06:0,24,338	0/0:22,0:23:45.15:0,45,702	0/0:18,0:18:36.12:0,36,579	0/0:32,0:32:72.17:0,72,1026	0/0:35,0:35:39.10:0,39,558	1/1:3,18:22:38.88:939,39,0	0/0:18,0:18:33.11:0,33,509	0/0:17,0:17:42.11:0,42,613	1/1:4,17:22:23.98:579,24,0	0/1:8,16:25:6.16:882,0,6	0/0:14,0:14:33.11:0,33,527	0/0:31,0:31:56.76:0,57,1149	0/0:26,0:26:60.20:0,60,961	0/0:22,0:22:45.15:0,45,719	0/0:25,0:25:26.12:0,26,626	0/0:22,0:17:30.09:0,30,443	0/0:20,0:20:39.13:0,39,626	0/0:26,0:27:42.12:0,42,632	1/1:2,11:13:30.10:723,30,0	0/1:8,8:16:68.42:474,0,68	1/1:7,14:22:39.13:940,39,0	0/0:22,0:22:42.13:0,42,651	0/0:29,0:29:72.22:0,72,1094	0/0:31,0:32:78.24:0,78,1211	0/0:8,0:8:21.07:0,21,329
chr10	75273346	.	TTTTATTTATTTATTTA	T	1242.35	PASS	AB=0.680;AC=7;AF=0.159;AN=44;BaseQRankSum=5.376;DP=287;FS=12.467;HRun=0;HaplotypeScore=114.3951;InbreedingCoeff=0.5153;MQ=62.81;MQ0=3;MQRankSum=-4.931;QD=29.58;ReadPosRankSum=0.311;VQSLOD=2.0370;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,8:17:99:461,0,114	0/0:6,0:6:6.02:0,6,277	./.	./.	0/0:13,0:13:15.05:0,15,822	0/0:16,0:16:27.09:0,27,1837	0/0:7,0:7:9.03:0,9,617	0/0:33,0:33:39.13:0,39,2445	./.	0/0:11,0:11:9.03:0,9,587	0/0:9,0:9:21.07:0,21,1352	1/1:7,0:7:3:25,3,0	1/1:6,5:11:12.04:484,12,0	0/0:6,0:6:3.01:0,3,111	./.	0/0:7,0:7:9.03:0,9,527	0/0:18,0:18:42.14:0,42,2931	0/0:14,0:14:18.06:0,18,1104	0/0:15,0:14:15.05:0,15,1134	0/0:6,0:6:6.02:0,6,338	0/0:2,0:2:3.01:0,3,228	1/1:4,3:7:9.03:395,9,0	./.	./.	0/0:5,0:5:9.03:0,9,498	0/0:14,0:14:9.03:0,9,668	0/0:11,0:11:15.05:0,15,918	0/0:26,0:26:27.09:0,27,1539
chr10	75273765	.	G	GAA	1915.64	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-2.440;DP=670;FS=4.186;HRun=9;HaplotypeScore=84.4495;InbreedingCoeff=0.9139;MQ=59.40;MQ0=30;MQRankSum=0.830;QD=20.60;ReadPosRankSum=2.383;VQSLOD=2.8168;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:99:0,108,1146	0/0:3,0:4:8.76:0,9,76	0/0:59,0:18:33.35:0,33,351	0/0:64,0:23:43.82:0,44,333	0/0:27,0:27:69.15:0,69,726	0/0:16,0:15:33.06:0,33,351	0/0:20,0:19:48.11:0,48,511	0/0:31,0:29:78.17:0,78,815	1/1:3,9:13:2.46:300,2,0	0/0:22,0:22:63.15:0,63,663	0/0:21,0:20:57.14:0,57,606	1/1:4,15:20:35.09:479,35,0	1/1:4,15:20:32.98:490,33,0	0/0:16,0:15:39.09:0,39,414	0/0:19,0:17:45.11:0,45,479	0/0:21,0:19:54.14:0,54,574	0/0:30,0:29:72.13:0,72,746	0/0:29,0:29:56.80:0,57,651	0/0:25,0:23:49.47:0,49,549	0/0:20,0:18:54.12:0,54,566	0/0:16,0:16:35.76:0,36,382	1/1:3,3:6:8.99:112,9,0	1/1:4,13:15:21.07:312,21,0	1/1:5,9:13:27.09:398,27,0	0/0:20,0:19:57.14:0,57,607	0/0:32,0:31:86.82:0,87,890	0/0:37,0:36:93.05:0,93,965	0/0:4,0:3:6.01:0,6,64
chr10	75274914	.	CTG	C	155.46	PASS	AB=0.888;AC=13;AF=0.260;AN=50;BaseQRankSum=2.264;DP=558;FS=9.001;HRun=0;HaplotypeScore=81.1639;InbreedingCoeff=-0.2391;MQ=61.89;MQ0=11;MQRankSum=2.001;QD=0.81;ReadPosRankSum=0.819;VQSLOD=0.7410;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:24:2.84:14,3,0	0/0:6,0:6:6.02:0,6,86	./.	./.	0/1:19,1:20:14.37:14,0,172	0/0:19,0:19:18.06:0,18,256	0/1:11,3:14:31.66:42,0,32	./.	0/0:11,0:18:6:0,6,52	0/0:26,0:26:21.06:0,21,269	0/0:17,0:17:9.03:0,9,118	0/0:13,0:20:9.01:0,9,96	0/0:11,0:20:12.47:0,12,106	0/1:12,0:12:17.25:17,0,163	0/1:11,2:14:28.52:29,0,152	0/1:15,2:17:40.65:41,0,242	0/1:15,2:17:45.09:45,0,142	0/1:15,2:17:31.76:32,0,338	0/0:25,0:24:8.14:0,8,66	0/1:17,0:20:8.13:8,0,36	0/0:48,0:47:27.02:0,27,344	0/0:21,0:30:10.10:0,10,123	0/0:12,0:12:12.01:0,12,122	0/0:20,0:34:28.92:0,29,251	0/1:14,4:18:11.36:11,0,224	0/0:24,0:24:7.26:0,7,77	0/1:11,1:12:23.38:23,0,80	0/1:6,1:5:20.37:20,0,113
chr10	75277671	.	TTCTCTCTCTCTCTC	T	94.80	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.662;DP=608;FS=0.000;HRun=0;HaplotypeScore=203.2143;InbreedingCoeff=0.4621;MQ=71.16;MQ0=15;MQRankSum=-1.693;QD=2.96;ReadPosRankSum=1.047;VQSLOD=2.3997;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,11:32:8.09:177,8,0	0/0:11,0:11:6.91:0,7,390	0/0:35,0:18:3.48:0,3,49	0/0:39,0:18:6.49:0,6,94	0/0:15,0:15:12.04:0,12,441	0/0:16,0:18:21.07:0,21,941	0/0:23,0:25:24.53:0,25,1016	0/0:40,0:40:29.33:0,29,580	0/0:22,0:28:27.07:0,27,1108	0/0:33,0:36:49.40:0,49,1990	0/0:11,0:12:3.48:0,3,123	0/0:17,0:20:26.86:0,27,1456	0/0:15,0:16:18.06:0,18,840	0/0:20,0:21:36.12:0,36,1777	0/0:17,0:17:21.06:0,21,872	0/0:12,0:14:12.03:0,12,432	0/0:20,0:20:21.07:0,21,963	0/0:21,0:21:39.04:0,39,2020	0/0:21,0:21:15.05:0,15,817	0/0:18,0:18:6.02:0,6,247	0/0:32,0:32:27.91:0,28,1161	0/0:18,0:21:17.74:0,18,595	0/0:19,0:18:18.06:0,18,823	0/0:15,0:14:21.07:0,21,1161	0/0:17,0:16:18.06:0,18,749	0/0:17,0:19:33.10:0,33,1500	0/0:14,0:15:27.05:0,27,1392	0/0:9,0:9:6.02:0,6,259
chr10	75279831	.	AAAAAC	A	2612.44	PASS	AB=0.861;AC=28;AF=0.560;AN=50;BaseQRankSum=9.068;DP=564;FS=12.658;HRun=0;HaplotypeScore=99.2194;InbreedingCoeff=0.6015;MQ=50.21;MQ0=32;MQRankSum=-2.465;QD=7.85;ReadPosRankSum=1.094;VQSLOD=1.2073;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:37:12.03:138,12,0	0/0:8,0:8:9.03:0,9,248	./.	./.	0/0:19,0:19:21.07:0,21,579	0/0:21,0:21:27.09:0,27,733	0/0:24,0:23:18.06:0,18,485	0/1:29,0:24:0:0,0,0	1/1:14,0:18:3.01:35,3,0	0/0:17,0:16:18.06:0,18,459	0/1:22,0:21:28.46:28,0,475	1/1:8,0:17:3.01:35,3,0	1/1:6,0:9:3.01:35,3,0	1/1:10,0:10:2.69:34,3,0	0/0:22,0:22:33.11:0,33,902	0/0:17,0:16:18.06:0,18,496	0/0:46,0:42:57.19:0,57,1498	1/1:9,16:25:24.08:422,24,0	1/1:8,3:11:9.03:158,9,0	1/1:12,9:21:27.09:474,27,0	1/1:19,8:25:15.05:263,15,0	./.	0/1:5,0:8:0.07:0,0,0	1/1:19,0:24:2.62:34,3,0	0/0:22,0:22:18.06:0,18,485	0/1:16,8:22:55.65:394,0,56	1/1:18,14:32:35.87:632,36,0	1/1:8,0:7:6.02:105,6,0
chr10	75280139	.	C	CT	1087.69	PASS	AB=0.803;AC=14;AF=0.250;AN=56;BaseQRankSum=-1.313;DP=417;FS=3.560;HRun=13;HaplotypeScore=53.3121;InbreedingCoeff=0.4088;MQ=74.28;MQ0=1;MQRankSum=-1.550;QD=8.63;ReadPosRankSum=1.387;VQSLOD=2.5805;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:17,19:36:0.57:388,0,1	0/0:6,0:7:10.89:0,11,67	0/0:19,0:10:13.41:0,13,93	0/1:10,0:9:1.32:1,0,15	0/0:17,0:17:32.56:0,33,221	0/0:18,0:18:38.62:0,39,267	0/0:4,0:5:4.89:0,5,21	0/0:29,0:29:57.83:0,58,383	1/1:1,17:18:36.04:334,36,0	0/0:17,0:17:38.63:0,39,267	0/0:10,0:10:20.77:0,21,142	1/1:4,4:8:3:28,3,0	1/1:4,10:14:7.05:202,7,0	0/0:5,0:4:8.90:0,9,60	0/0:17,0:17:38.63:0,39,267	0/1:12,1:13:1.10:1,0,138	0/0:23,0:23:44.46:0,44,303	0/0:14,0:15:25.75:0,26,170	0/0:18,1:19:1.79:0,2,155	0/0:12,0:14:39.61:0,40,250	0/1:3,0:4:16.75:17,0,36	1/1:0,3:3:9.01:84,9,0	0/1:4,6:12:11.44:166,0,11	0/1:3,4:7:14.56:22,0,15	0/0:11,0:13:33.82:0,34,217	0/0:13,0:15:33.77:0,34,217	0/0:27,0:28:61.22:0,61,408	0/0:15,1:16:4.82:0,5,178
chr10	75280944	.	AACACAC	A	779.37	PASS	AB=0.958;AC=13;AF=0.250;AN=52;BaseQRankSum=2.803;DP=438;FS=3.260;HRun=0;HaplotypeScore=99.6680;InbreedingCoeff=0.7942;MQ=60.91;MQ0=9;MQRankSum=-3.138;QD=7.09;ReadPosRankSum=0.554;VQSLOD=2.1646;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:23:0.17:1,0,0	0/0:3,0:5:13.59:0,14,267	./.	./.	0/0:15,0:15:30.04:0,30,572	0/0:13,0:12:15.01:0,15,292	0/0:18,0:18:21.04:0,21,477	0/0:29,0:29:10.58:0,11,109	1/1:11,4:15:6.02:121,6,0	0/0:11,0:11:18.52:0,19,479	0/0:11,0:13:11.93:0,12,248	1/1:3,8:12:9.84:183,10,0	1/1:9,0:9:3.01:61,3,0	0/0:14,0:14:9.01:0,9,203	0/0:10,0:10:9.01:0,9,169	0/0:7,0:14:15.05:0,15,375	0/0:16,0:18:33.02:0,33,719	0/0:13,0:13:21.05:0,21,513	0/0:14,0:14:20.96:0,21,412	0/0:18,0:18:33.06:0,33,813	0/0:20,0:19:36.12:0,36,944	1/1:6,7:13:8.31:135,8,0	1/1:7,8:15:14.83:175,15,0	1/1:21,1:23:3.98:259,4,0	0/0:20,0:20:20.96:0,21,397	0/0:9,0:10:21.01:0,21,326	0/0:21,0:23:39.59:0,40,987	0/0:7,0:8:24.08:0,24,615
chr10	75281408	.	GA	G	2443.44	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.128;DP=485;FS=0.407;HRun=11;HaplotypeScore=59.7182;InbreedingCoeff=0.9074;MQ=63.22;MQ0=5;MQRankSum=1.926;QD=17.45;ReadPosRankSum=4.220;VQSLOD=4.5167;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,37:38:99:837,102,0	0/0:4,0:4:12.03:0,12,128	0/0:17,0:9:12.06:0,12,148	0/0:11,0:9:5.87:0,6,110	0/0:8,0:8:18.05:0,18,192	0/0:14,0:14:36.09:0,36,384	0/0:19,0:19:54.14:0,54,576	0/0:31,0:31:59.47:0,59,565	1/1:2,12:14:26.97:222,27,0	0/0:9,1:10:2.51:0,3,231	0/0:12,0:12:30.07:0,30,317	1/1:1,10:11:23.96:197,24,0	1/1:3,14:17:47.79:384,48,0	0/0:11,0:11:27.05:0,27,280	0/0:21,1:22:26.44:0,26,472	0/0:17,0:16:42.07:0,42,435	0/0:38,0:38:99:0,99,1054	0/0:15,0:15:36.09:0,36,383	0/0:20,0:19:47.41:0,47,457	0/0:15,0:15:42.11:0,42,447	0/0:13,1:14:17.43:0,17,370	1/1:1,2:3:5.99:49,6,0	1/1:4,9:12:20.95:172,21,0	1/1:8,36:44:44.25:774,44,0	0/0:4,0:4:12.02:0,12,120	0/0:20,0:20:57.14:0,57,607	0/0:19,0:19:48.12:0,48,506	0/0:22,1:21:26.47:0,26,479
chr10	75281972	.	A	AT	2871.95	PASS	AB=0.923;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.142;DP=419;FS=0.000;HRun=8;HaplotypeScore=43.6534;InbreedingCoeff=0.8880;MQ=76.69;MQ0=0;MQRankSum=1.358;QD=25.19;ReadPosRankSum=-0.499;VQSLOD=3.7949;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:29:72.05:811,72,0	0/0:7,0:7:21.01:0,21,192	0/0:8,0:8:10.04:0,10,77	0/0:9,0:11:4.79:0,5,98	0/0:21,0:21:54.02:0,54,494	0/0:20,0:20:57.03:0,57,521	0/1:11,1:12:4.60:5,0,217	0/0:22,0:22:22.40:0,22,460	1/1:2,14:16:42.12:484,42,0	0/0:17,0:17:48.02:0,48,439	0/0:7,0:7:15:0,15,137	1/1:0,12:12:27.08:312,27,0	1/1:1,6:7:21.04:230,21,0	0/0:15,0:15:39.01:0,39,357	0/0:14,0:14:33.01:0,33,302	0/0:19,0:19:54.03:0,54,494	0/0:26,0:26:69.01:0,69,626	0/0:12,0:12:36.02:0,36,329	0/0:18,0:18:38.97:0,39,349	0/0:5,0:5:15.01:0,15,137	0/0:14,0:14:41.98:0,42,373	1/1:1,9:10:30.04:327,30,0	1/1:0,4:4:12.04:138,12,0	1/1:0,24:24:66.20:762,66,0	0/0:16,0:16:45.02:0,45,412	0/0:28,0:28:78.04:0,78,714	0/0:16,0:16:45.02:0,45,412	0/0:9,0:9:21.01:0,21,192
chr10	75284099	.	GA	G	2381.81	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.627;DP=552;FS=0.872;HRun=9;HaplotypeScore=53.7337;InbreedingCoeff=0.9727;MQ=63.10;MQ0=8;MQRankSum=0.477;QD=18.61;ReadPosRankSum=4.164;VQSLOD=3.7186;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:32:81.04:741,81,0	0/0:6,0:6:15.04:0,15,173	0/0:18,0:8:6.15:0,6,141	0/0:13,0:6:12.84:0,13,111	0/0:21,0:21:60.16:0,60,681	0/0:18,0:18:54.16:0,54,623	0/0:17,0:17:51.15:0,51,588	0/0:44,0:42:99:0,114,1287	1/1:5,10:15:21:192,21,0	0/0:28,0:28:78.20:0,78,880	0/0:20,0:20:57.17:0,57,658	1/1:5,10:15:27.01:247,27,0	1/1:0,13:13:32.61:302,33,0	0/0:13,0:13:33.10:0,33,381	0/0:8,0:8:24.07:0,24,277	0/0:15,0:15:39.10:0,39,440	0/0:24,0:26:71.86:0,72,781	0/0:22,0:21:51.11:0,51,574	0/0:20,0:20:48.60:0,49,545	0/0:26,0:26:66.16:0,66,741	0/0:19,0:19:51.14:0,51,576	1/1:1,13:14:36.02:329,36,0	1/1:3,18:21:41.78:384,42,0	1/1:0,16:16:42.02:384,42,0	0/0:26,0:26:75.22:0,75,866	0/0:29,0:30:90.10:0,90,1019	0/0:19,0:19:51.14:0,51,578	0/0:15,0:14:42.12:0,42,485
chr10	75285632	.	ATTTTT	A	1330.45	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.524;DP=422;FS=17.279;HRun=14;HaplotypeScore=87.2254;InbreedingCoeff=0.9251;MQ=63.23;MQ0=3;MQRankSum=-7.503;QD=17.98;ReadPosRankSum=5.029;VQSLOD=-0.3775;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:28:55.27:214,55,0	0/0:8,0:8:24.08:0,24,654	0/0:15,0:7:15.04:0,15,291	0/0:9,0:6:12.04:0,12,218	0/0:16,0:20:45.15:0,45,1129	0/0:12,0:15:39.13:0,39,1043	0/0:20,0:22:54.17:0,54,1414	0/0:21,0:23:45.15:0,45,1131	1/1:0,7:7:15.05:237,15,0	0/0:17,0:18:51.15:0,51,1219	0/0:16,0:16:36.12:0,36,985	1/1:0,10:10:27.05:417,27,0	1/1:4,3:7:5.96:99,6,0	0/0:16,0:16:33.11:0,33,872	0/0:12,0:12:21.04:0,21,461	0/0:10,0:11:27.09:0,27,718	0/0:28,0:30:85.17:0,85,2299	0/0:8,0:9:21.06:0,21,489	0/0:16,0:14:36.12:0,36,976	0/0:14,0:16:45.15:0,45,1169	0/0:5,0:8:21.07:0,21,543	1/1:4,3:7:5.93:99,6,0	1/1:1,8:9:21.04:348,21,0	1/1:2,4:6:6:99,6,0	0/0:12,0:14:36.11:0,36,874	0/0:18,0:21:39.11:0,39,904	0/0:28,0:32:84.23:0,84,2093	0/0:14,0:15:42.14:0,42,1165
chr10	75286255	.	ATAGC	A	7255.05	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.417;DP=572;FS=0.364;HRun=0;HaplotypeScore=95.6913;InbreedingCoeff=0.9575;MQ=65.60;MQ0=0;MQRankSum=-3.863;QD=42.93;ReadPosRankSum=3.922;VQSLOD=5.3754;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,34:39:93.32:1673,93,0	0/0:9,0:9:27.09:0,27,707	0/0:7,0:7:2.88:0,3,78	0/0:8,0:8:9.01:0,9,105	0/0:34,0:34:96.33:0,96,2514	0/0:27,0:27:66.21:0,66,1657	0/0:15,0:15:36.12:0,36,924	0/0:28,0:28:69.24:0,69,1709	1/1:2,20:22:54.19:982,54,0	0/0:15,0:15:39.12:0,39,902	0/0:17,0:17:42.14:0,42,1099	1/1:1,17:18:48.16:872,48,0	1/1:1,12:13:33.11:600,33,0	0/0:12,0:12:30.08:0,30,694	0/0:26,0:26:78.27:0,78,2040	0/0:15,0:15:42.14:0,42,1100	0/0:26,0:26:69.24:0,69,1808	0/0:16,0:16:48.16:0,48,1236	0/0:25,0:25:69.24:0,69,1759	0/0:29,0:29:84.29:0,84,2138	0/0:23,0:23:69.24:0,69,1803	1/1:3,20:23:54.18:946,54,0	1/1:3,19:22:57.20:1037,57,0	1/1:8,24:32:63.22:1146,63,0	0/0:12,0:12:36.12:0,36,943	0/0:20,0:20:54.18:0,54,1363	0/0:22,0:22:63.20:0,63,1578	0/0:17,0:17:48.15:0,48,1200
chr10	75286385	.	AT	A	3067.85	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.839;DP=508;FS=1.758;HRun=9;HaplotypeScore=63.0053;InbreedingCoeff=0.9684;MQ=74.73;MQ0=0;MQRankSum=-3.570;QD=21.45;ReadPosRankSum=0.539;VQSLOD=4.4495;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,31:35:67.36:768,67,0	0/0:11,0:11:30.09:0,30,346	0/0:12,0:12:33.09:0,33,366	0/0:10,0:10:3.24:0,3,129	0/0:29,0:29:75.19:0,75,845	0/0:15,0:15:36.11:0,36,415	0/0:17,0:17:51.12:0,51,569	0/0:27,0:28:62.98:0,63,674	1/1:2,19:21:57.02:521,57,0	0/0:11,0:11:24.07:0,24,277	0/0:15,0:15:39.12:0,39,450	1/1:2,13:15:42.02:384,42,0	1/1:2,14:16:42.02:384,42,0	0/0:13,0:13:36.09:0,36,406	0/0:12,0:12:24.07:0,24,277	0/0:12,0:12:36.11:0,36,414	0/0:29,0:30:87.05:0,87,960	0/0:23,0:23:63.10:0,63,697	0/0:19,0:20:50.98:0,51,568	0/0:20,0:20:54.16:0,54,623	0/0:17,0:17:36.09:0,36,406	1/1:2,21:23:63.03:576,63,0	1/1:1,13:14:33.01:302,33,0	1/1:4,15:19:36.01:329,36,0	0/0:13,0:13:39.10:0,39,441	0/0:19,0:18:48.14:0,48,546	0/0:29,0:30:72.02:0,72,790	0/0:8,0:8:24.06:0,24,269
chr10	75286425	.	GA	G	4068.33	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.602;DP=518;FS=0.000;HRun=3;HaplotypeScore=64.0623;InbreedingCoeff=0.9951;MQ=63.04;MQ0=0;MQRankSum=-5.723;QD=31.54;ReadPosRankSum=2.942;VQSLOD=3.6797;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,24:30:87.16:984,87,0	0/0:11,0:11:30.07:0,30,394	0/0:11,0:8:17.19:0,17,252	0/0:12,0:9:16.07:0,16,130	0/0:29,0:29:84.19:0,84,1084	0/0:13,0:13:36.11:0,36,486	0/0:17,0:17:45.13:0,45,609	0/0:33,0:33:91.43:0,91,1157	1/1:3,19:22:63.19:762,63,0	0/0:14,0:14:42.13:0,42,572	0/0:23,0:23:69.19:0,69,925	1/1:3,10:13:27.02:364,27,0	1/1:3,10:13:36.09:418,36,0	0/0:14,0:14:42.11:0,42,565	0/0:16,0:16:48.16:0,48,686	0/0:17,0:17:51.16:0,51,699	0/0:21,0:21:60.07:0,60,774	0/0:21,0:21:63.18:0,63,847	0/0:23,0:23:66.20:0,66,896	0/0:29,0:29:86.82:0,87,1066	0/0:24,0:24:69.21:0,69,965	1/1:5,22:27:68.85:791,69,0	1/1:2,9:11:32.99:358,33,0	1/1:2,11:13:35.98:390,36,0	0/0:14,0:14:39.12:0,39,543	0/0:17,0:17:48.14:0,48,641	0/0:22,0:22:66.15:0,66,866	0/0:8,0:8:24.02:0,24,285
chr10	75287273	.	A	ACTT	8452.03	PASS	AB=0.772;AC=14;AF=0.250;AN=56;BaseQRankSum=16.182;DP=684;FS=11.112;HRun=0;HaplotypeScore=115.0040;InbreedingCoeff=0.8342;MQ=83.09;MQ0=1;MQRankSum=-4.436;QD=46.70;ReadPosRankSum=1.789;VQSLOD=6.7075;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,45:54:99:3087,147,0	0/0:10,0:10:21.04:0,21,291	0/0:29,0:26:66.53:0,67,940	0/0:33,0:31:57.63:0,58,874	0/0:26,0:26:69.22:0,69,1085	0/0:27,0:26:75.26:0,75,1205	0/0:20,0:20:54.10:0,54,834	0/0:20,0:20:54.18:0,54,846	0/1:5,11:16:6.12:729,0,6	0/0:23,0:23:63.21:0,63,1012	0/0:17,0:17:48.14:0,48,737	1/1:5,16:21:54.19:1165,54,0	1/1:5,13:17:39.13:856,39,0	0/0:21,0:21:63.20:0,63,986	0/0:34,0:34:96.31:0,96,1518	0/1:19,1:20:11.68:12,0,763	0/0:34,0:34:87.28:0,87,1373	0/0:17,0:17:45.10:0,45,657	0/0:33,0:33:93.28:0,93,1465	0/0:27,0:27:78.25:0,78,1220	0/0:56,0:56:99:0,134,2254	1/1:3,13:16:42.13:867,42,0	1/1:2,6:8:24.07:472,24,0	1/1:8,20:28:63.17:1264,63,0	0/0:17,0:17:48.15:0,48,748	0/0:22,0:22:66.23:0,66,1059	0/0:19,0:19:57.18:0,57,891	0/0:18,0:18:52.42:0,52,809
chr10	75287360	.	C	CA	4889.06	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.473;DP=608;FS=39.694;HRun=2;HaplotypeScore=66.5837;InbreedingCoeff=0.9585;MQ=67.34;MQ0=1;MQRankSum=1.049;QD=39.43;ReadPosRankSum=1.990;VQSLOD=2.1267;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:75.25:1074,75,0	0/0:14,0:14:42.12:0,42,510	0/0:15,0:9:1.21:0,1,79	0/0:20,0:12:23.69:0,24,196	0/0:19,0:19:51.16:0,51,631	0/0:29,0:29:84.21:0,84,1003	0/0:16,0:16:48.15:0,48,595	0/0:32,0:32:84.26:0,84,1041	1/1:0,20:20:60.12:838,60,0	0/0:28,0:28:81.25:0,81,1003	0/0:18,0:18:51.16:0,51,632	1/1:2,9:11:30.10:432,30,0	1/1:2,14:16:45.08:619,45,0	0/0:7,0:7:21.07:0,21,259	0/0:24,0:24:72.22:0,72,882	0/0:25,0:25:72.23:0,72,893	0/0:24,0:24:72.12:0,72,855	0/0:33,0:33:93.23:0,93,1121	0/0:23,0:23:66.21:0,66,818	0/0:23,0:23:69.22:0,69,855	0/0:49,0:48:99:0,141,1726	1/1:3,17:20:54.17:760,54,0	1/1:0,14:14:42.14:605,42,0	1/1:1,14:15:39.13:562,39,0	0/0:16,0:16:48.15:0,48,595	0/0:27,0:27:81.24:0,81,992	0/0:22,0:21:66.19:0,66,804	0/0:18,0:18:54.17:0,54,669
chr10	75287523	.	C	CT	4070.13	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=1.300;DP=441;FS=11.261;HRun=0;HaplotypeScore=47.8537;InbreedingCoeff=0.9870;MQ=94.33;MQ0=0;MQRankSum=-2.983;QD=43.30;ReadPosRankSum=2.457;VQSLOD=3.2943;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:78.27:1244,78,0	0/0:8,0:8:24.08:0,24,334	0/0:20,0:20:60.11:0,60,734	0/0:22,0:22:62.99:0,63,768	0/0:17,0:17:51.16:0,51,694	0/0:19,0:19:57.18:0,57,776	0/0:9,0:9:26.99:0,27,315	0/0:28,0:28:84.17:0,84,1093	1/1:0,9:9:24.08:383,24,0	0/0:19,0:19:54.18:0,54,740	0/0:19,0:19:57.17:0,57,760	1/1:0,9:9:24.08:383,24,0	1/1:0,5:5:9.03:144,9,0	0/0:9,0:9:24.08:0,24,335	0/0:20,0:20:57.18:0,57,780	0/0:15,0:15:45.15:0,45,627	0/0:9,0:9:27.09:0,27,376	0/0:26,0:26:72.04:0,72,957	0/0:19,0:19:54.18:0,54,746	0/0:16,0:16:48.16:0,48,668	0/0:17,0:17:48.16:0,48,667	1/1:0,17:17:51.17:814,51,0	1/1:0,13:13:39.13:623,39,0	1/1:0,11:11:30.10:479,30,0	0/0:15,0:15:45.08:0,45,599	0/0:16,0:16:45.14:0,45,608	0/0:16,0:16:48.16:0,48,666	0/0:8,0:8:24.08:0,24,335
chr10	75288020	.	GC	G	2400.39	PASS	AB=1.000;AC=53;AF=0.981;AN=54;BaseQRankSum=-2.239;DP=320;FS=182.427;HRun=1;HaplotypeScore=180.4665;InbreedingCoeff=0.0586;MQ=32.88;MQ0=0;MQRankSum=-1.129;QD=7.52;ReadPosRankSum=0.474;VQSLOD=-0.1381;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,3:12:21:165,21,0	1/1:5,0:5:4.11:14,4,0	1/1:1,0:1:3:27,3,0	./.	1/1:23,2:25:20.69:184,21,0	1/1:15,1:16:12.10:89,12,0	1/1:10,4:14:10.94:130,11,0	1/1:15,5:19:28.81:217,29,0	1/1:7,1:8:9.18:66,9,0	1/1:18,4:22:23.97:149,24,0	1/1:15,1:16:11.91:99,12,0	0/1:10,0:10:1.09:20,0,1	1/1:9,4:13:22.21:165,22,0	1/1:10,1:11:8.41:70,8,0	1/1:4,3:7:13.60:122,14,0	1/1:13,3:16:16.01:135,16,0	1/1:5,0:5:6.43:27,6,0	1/1:3,3:6:0.98:101,1,0	1/1:3,1:4:7.94:49,8,0	1/1:14,2:16:2.08:61,2,0	1/1:2,0:2:1.25:3,1,0	1/1:13,2:15:4.69:106,5,0	1/1:12,1:13:11.56:92,12,0	1/1:5,0:5:2.63:6,3,0	1/1:15,2:17:10.12:99,10,0	1/1:15,1:15:6.43:46,6,0	1/1:18,4:22:14.09:210,14,0	1/1:2,0:2:4.78:25,5,0
chr10	75288105	.	G	GT	11923.02	PASS	AB=0.857;AC=53;AF=0.946;AN=56;BaseQRankSum=1.537;DP=277;FS=0.000;HRun=0;HaplotypeScore=232.9798;InbreedingCoeff=0.2643;MQ=49.79;MQ0=0;MQRankSum=-2.950;QD=43.36;ReadPosRankSum=0.718;VQSLOD=3.8119;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:33.11:515,33,0	1/1:0,6:6:18.06:285,18,0	0/0:2,0:2:3.01:0,3,40	0/1:5,1:6:58.03:60,0,58	1/1:0,7:7:21.07:325,21,0	1/1:0,14:14:42.14:670,42,0	1/1:1,6:7:21.07:301,21,0	1/1:1,13:14:39.13:635,39,0	1/1:0,20:20:60.20:946,60,0	1/1:0,13:13:39.13:615,39,0	1/1:2,12:14:36.12:555,36,0	1/1:0,12:12:36.12:590,36,0	1/1:0,10:10:30.10:475,30,0	1/1:1,10:11:30.03:440,30,0	1/1:0,17:17:51.17:797,51,0	1/1:0,9:9:27.09:424,27,0	1/1:0,2:2:3.01:48,3,0	1/1:0,1:1:3.01:48,3,0	1/1:0,6:6:18.06:287,18,0	1/1:3,18:21:54.11:810,54,0	1/1:0,1:1:3.01:48,3,0	1/1:0,17:18:51:716,51,0	1/1:0,17:17:51.17:802,51,0	1/1:1,2:3:6.02:89,6,0	1/1:0,4:5:12.04:169,12,0	1/1:0,12:12:36.12:583,36,0	1/1:1,13:14:39.13:603,39,0	1/1:1,1:2:6.02:86,6,0
chr10	75288115	.	CG	C	7704.54	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=2.505;DP=242;FS=2.062;HRun=1;HaplotypeScore=242.7902;InbreedingCoeff=0.6289;MQ=49.04;MQ0=0;MQRankSum=-3.826;QD=32.65;ReadPosRankSum=2.257;VQSLOD=4.3390;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:30.08:336,30,0	1/1:1,6:7:21:207,21,0	0/0:1,0:1:3:0,3,27	0/0:4,0:5:8.08:0,8,47	1/1:0,7:7:21.02:217,21,0	1/1:0,11:11:33.07:382,33,0	1/1:0,6:6:18.06:215,18,0	1/1:0,12:13:36.05:450,36,0	1/1:0,17:19:56.94:628,57,0	1/1:0,13:12:36.11:442,36,0	1/1:0,12:12:33.08:368,33,0	1/1:0,10:10:30.09:360,30,0	1/1:0,8:8:24.07:289,24,0	1/1:0,11:11:30.04:339,30,0	1/1:0,13:13:38.99:431,39,0	1/1:0,7:7:20.93:232,21,0	./.	1/1:0,1:1:3.01:38,3,0	1/1:0,4:4:12.03:144,12,0	1/1:0,15:16:48.01:530,48,0	1/1:0,1:1:3.01:35,3,0	1/1:0,12:13:35.85:355,36,0	1/1:0,17:17:51.01:558,51,0	1/1:0,4:4:8.89:71,9,0	1/1:0,6:6:17.99:179,18,0	1/1:0,10:11:33.02:401,33,0	1/1:0,12:13:36:420,36,0	1/1:0,2:2:6.02:80,6,0
chr10	75288119	.	C	CAT	13197.33	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.679;DP=288;FS=2.055;HRun=0;HaplotypeScore=268.2810;InbreedingCoeff=0.6134;MQ=46.36;MQ0=0;MQRankSum=-3.421;QD=46.80;ReadPosRankSum=1.132;VQSLOD=4.1446;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,11:14:33.07:547,33,0	1/1:0,7:7:21.07:335,21,0	0/0:1,0:1:3.01:0,3,49	0/0:5,0:5:5.68:0,6,64	1/1:1,7:8:21.07:340,21,0	1/1:1,11:12:33.11:583,33,0	1/1:4,6:10:24.04:385,24,0	1/1:7,12:19:51.60:890,52,0	1/1:2,17:19:57.19:994,57,0	1/1:4,13:16:48.16:867,48,0	1/1:4,12:16:39.09:652,39,0	1/1:0,10:10:30.10:554,30,0	1/1:1,8:9:27.09:496,27,0	1/1:0,11:11:30.10:541,30,0	1/1:0,13:13:39.13:669,39,0	1/1:0,7:7:21.07:377,21,0	1/1:1,0:1:2.97:20,3,0	1/1:1,1:2:6.02:102,6,0	1/1:1,4:5:15.05:288,15,0	1/1:4,14:18:54.14:900,54,0	1/1:2,1:3:6.02:100,6,0	1/1:6,11:18:45.09:667,45,0	1/1:1,17:18:54.18:923,54,0	1/1:4,4:8:12:150,12,0	1/1:1,6:7:21.07:340,21,0	1/1:2,10:12:36.12:664,36,0	1/1:4,12:16:45.04:696,45,0	1/1:0,2:2:6.02:118,6,0
chr10	75288128	.	GA	G	8109.80	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.420;DP=269;FS=4.383;HRun=2;HaplotypeScore=259.0272;InbreedingCoeff=0.6414;MQ=44.80;MQ0=0;MQRankSum=-3.427;QD=30.72;ReadPosRankSum=1.773;VQSLOD=4.0726;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:14:33.11:428,33,0	1/1:1,5:6:15.05:194,15,0	0/0:1,0:1:3.01:0,3,45	0/0:4,0:4:6.47:0,6,44	1/1:1,8:9:21.07:272,21,0	1/1:2,8:10:21.07:272,21,0	1/1:1,9:10:24.08:311,24,0	1/1:3,13:16:36.05:467,36,0	1/1:5,11:16:33.11:428,33,0	1/1:3,14:16:39.13:506,39,0	1/1:3,13:16:36.12:465,36,0	1/1:2,6:8:18.06:233,18,0	1/1:1,8:9:24.08:311,24,0	1/1:1,9:10:24.08:311,24,0	1/1:1,10:11:30.10:389,30,0	1/1:2,5:7:15.05:194,15,0	1/1:0,2:2:6.02:78,6,0	1/1:0,2:2:6.02:78,6,0	1/1:1,4:5:12.03:145,12,0	1/1:0,16:16:48.16:621,48,0	1/1:0,3:3:6.02:78,6,0	1/1:3,15:18:39.13:505,39,0	1/1:2,16:18:48.16:621,48,0	1/1:1,7:8:15.05:194,15,0	1/1:0,5:5:15.05:194,15,0	1/1:3,7:10:21.07:272,21,0	1/1:3,12:15:33.11:428,33,0	1/1:0,3:3:9.03:117,9,0
chr10	75288146	.	T	TA	8642.62	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=1.277;DP=224;FS=3.034;HRun=0;HaplotypeScore=216.6213;InbreedingCoeff=0.4784;MQ=37.17;MQ0=0;MQRankSum=-1.864;QD=38.93;ReadPosRankSum=2.060;VQSLOD=4.0507;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:12:33.11:526,33,0	1/1:0,5:5:15.05:239,15,0	./.	0/0:2,0:2:4.25:0,4,29	1/1:0,8:8:18.06:287,18,0	1/1:1,7:8:18.06:287,18,0	1/1:1,9:10:24.08:382,24,0	1/1:1,11:12:30.10:477,30,0	1/1:0,8:8:24.08:382,24,0	1/1:1,14:14:39.13:622,39,0	1/1:0,12:12:33.11:525,33,0	1/1:0,5:5:12.04:191,12,0	1/1:1,4:5:12.04:191,12,0	1/1:0,6:6:18.06:284,18,0	1/1:0,7:7:21.07:335,21,0	1/1:1,5:6:17.73:247,18,0	1/1:1,3:4:9.03:143,9,0	1/1:0,3:3:6.02:96,6,0	1/1:0,3:3:3.01:48,3,0	1/1:1,15:16:42.14:669,42,0	1/1:1,6:7:9.27:187,9,0	1/1:3,14:18:33.11:517,33,0	1/1:2,16:18:39.13:621,39,0	1/1:0,8:8:15.05:239,15,0	1/1:0,6:6:18.06:287,18,0	1/1:1,4:5:12.04:191,12,0	1/1:0,11:11:30.10:478,30,0	1/1:0,4:4:12.04:191,12,0
chr10	75288373	.	G	GA	709.18	PASS	AB=0.667;AC=11;AF=0.220;AN=50;BaseQRankSum=6.858;DP=192;FS=2.034;HRun=2;HaplotypeScore=60.1872;InbreedingCoeff=0.6738;MQ=35.80;MQ0=26;MQRankSum=-3.418;QD=22.88;ReadPosRankSum=-1.781;VQSLOD=3.0647;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:10:14.21:316,14,0	0/0:3,0:3:9.03:0,9,126	./.	./.	0/0:5,0:4:12.04:0,12,167	0/0:9,0:9:24.08:0,24,335	0/0:17,0:16:40.02:0,40,541	0/0:7,0:5:15.05:0,15,205	1/1:0,2:2:6.02:95,6,0	0/0:12,0:9:27.09:0,27,366	0/0:6,0:5:9.03:0,9,126	1/1:1,4:4:12.04:188,12,0	1/1:1,1:1:3.01:47,3,0	0/0:7,0:5:15.05:0,15,209	0/0:11,0:11:30.06:0,30,395	0/0:13,0:11:30.06:0,30,392	0/0:12,0:7:18.06:0,18,250	0/0:6,0:5:15.05:0,15,210	0/0:5,0:4:5.98:0,6,62	0/0:7,0:6:18.06:0,18,251	0/0:17,0:12:27.09:0,27,376	./.	1/1:1,4:5:7.74:180,8,0	0/1:3,3:5:34.21:34,0,57	0/0:4,0:3:9.03:0,9,123	0/0:8,0:7:18.06:0,18,251	0/0:8,0:7:21.07:0,21,293	0/0:1,0:1:3.01:0,3,42
chr10	75288380	.	AG	A	236.09	PASS	AB=0.533;AC=9;AF=0.180;AN=50;BaseQRankSum=5.736;DP=188;FS=1.159;HRun=2;HaplotypeScore=51.2708;InbreedingCoeff=0.6400;MQ=37.66;MQ0=25;MQRankSum=-3.841;QD=11.80;ReadPosRankSum=-2.522;VQSLOD=1.1478;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:1,7:7:4.24:135,0,4	0/0:3,0:3:9.03:0,9,128	./.	./.	0/0:5,0:4:12.04:0,12,162	0/0:9,0:9:24.08:0,24,346	0/0:15,0:14:33.58:0,34,486	0/0:9,0:7:18.06:0,18,252	1/1:0,1:1:3.01:38,3,0	0/0:11,0:8:24.08:0,24,346	0/0:6,0:5:9.03:0,9,126	1/1:1,4:4:11.96:109,12,0	1/1:1,1:1:3.01:37,3,0	0/0:8,0:6:15.05:0,15,218	0/0:12,0:12:30.10:0,30,427	0/0:11,0:10:29.89:0,30,401	0/0:13,0:8:23.93:0,24,292	0/0:6,0:5:15.05:0,15,221	0/0:6,0:5:11.95:0,12,162	0/0:7,0:6:18.06:0,18,250	0/0:16,0:12:27.09:0,27,377	./.	1/1:1,3:4:4.09:49,4,0	0/0:4,1:4:6.02:0,6,84	0/0:4,0:3:9.03:0,9,128	0/0:7,0:6:18.06:0,18,260	0/0:9,0:8:24.08:0,24,349	0/0:2,0:2:6.01:0,6,67
chr10	75289046	.	A	ATAAAAAATTAG	4230.60	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=7.951;DP=393;FS=2.974;HRun=0;HaplotypeScore=123.4498;InbreedingCoeff=0.7919;MQ=65.18;MQ0=0;MQRankSum=-6.625;QD=52.88;ReadPosRankSum=-1.551;VQSLOD=4.6023;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,9:17:27.09:1417,27,0	0/0:5,0:5:15.02:0,15,435	0/1:13,0:12:2.67:3,0,156	0/1:5,0:5:26.18:26,0,110	0/0:14,0:14:42.11:0,42,1278	0/0:13,0:13:36.05:0,36,1049	0/0:13,0:13:33.07:0,33,765	0/0:35,0:35:89.30:0,89,2324	1/1:6,3:15:18.02:607,18,0	0/0:10,0:10:24.08:0,24,731	0/0:21,0:21:56.65:0,57,1432	1/1:9,0:9:21.04:657,21,0	1/1:3,7:10:24.04:1064,24,0	0/0:6,0:6:12.03:0,12,337	0/0:9,0:9:24.07:0,24,639	0/0:12,0:12:32.46:0,32,815	0/0:32,0:32:84.23:0,84,2457	0/0:22,0:22:51.14:0,51,1459	0/0:29,0:29:81.21:0,81,2058	0/0:14,0:14:42.11:0,42,1112	0/0:9,0:9:18.05:0,18,488	1/1:4,0:4:9:87,9,0	1/1:2,0:2:6.02:267,6,0	1/1:2,1:4:5.93:103,6,0	0/0:14,0:14:33.02:0,33,924	0/0:21,0:21:54.17:0,54,1568	0/0:24,0:24:69.14:0,69,1941	0/0:10,0:10:30.09:0,30,891
chr10	75289395	.	A	AACACACACAC	750.01	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=4.786;DP=507;FS=0.000;HRun=0;HaplotypeScore=170.3922;InbreedingCoeff=0.8329;MQ=71.68;MQ0=16;MQRankSum=-3.777;QD=12.93;ReadPosRankSum=-1.896;VQSLOD=1.8920;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:8.83:162,9,0	0/0:7,0:7:15.05:0,15,468	0/0:33,0:22:43.82:0,44,1262	0/0:51,0:25:45.62:0,46,1075	0/0:21,0:21:30.06:0,30,949	0/0:17,0:16:32.88:0,33,976	0/0:14,0:14:29.93:0,30,928	0/0:33,0:31:75.22:0,75,2200	1/1:8,1:10:9.82:203,10,0	0/0:19,0:16:33.11:0,33,1031	0/0:13,0:13:12.04:0,12,372	1/1:7,2:11:6.02:127,6,0	1/1:5,1:6:12.04:352,12,0	0/0:17,0:16:27.01:0,27,708	0/0:25,0:25:41.96:0,42,1260	0/0:19,0:19:45.08:0,45,1165	0/0:31,0:29:84.27:0,84,2385	0/0:10,0:10:27.07:0,27,764	0/0:24,0:22:60.20:0,60,1793	0/0:12,0:12:27.03:0,27,794	0/0:31,0:29:75.24:0,75,2174	1/1:3,1:4:3.90:53,4,0	1/1:1,3:4:0.89:2,1,0	1/1:10,0:10:0.47:1,0,0	0/0:14,0:14:20.94:0,21,583	0/0:19,0:18:51.17:0,51,1407	0/0:23,0:22:54.05:0,54,1400	0/0:16,0:15:32.73:0,33,989
chr10	75289460	.	TGTGTGTGTGTATGA	T	603.88	PASS	AB=0.740;AC=9;AF=0.161;AN=56;BaseQRankSum=4.742;DP=560;FS=3.435;HRun=0;HaplotypeScore=191.5722;InbreedingCoeff=0.5885;MQ=47.71;MQ0=28;MQRankSum=-4.631;QD=5.92;ReadPosRankSum=-1.396;VQSLOD=2.7286;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:2,6:8:2.74:0,3,80	0/0:10,0:10:24.55:0,25,1574	0/0:16,0:4:11.63:0,12,389	0/1:13,0:4:29.58:30,0,203	0/0:28,0:27:40.04:0,40,2371	0/0:24,0:23:44.67:0,45,2154	0/0:17,0:16:29.03:0,29,1472	0/0:34,0:32:93.32:0,93,4539	1/1:5,11:15:6.49:155,6,0	0/0:38,0:34:80.45:0,80,4149	0/0:18,0:18:21.53:0,22,1099	1/1:2,16:18:3.01:91,3,0	1/1:4,12:16:5.89:448,6,0	0/0:20,0:20:35.53:0,36,1686	0/0:23,0:23:45.08:0,45,2650	0/0:17,0:17:33.58:0,34,1623	0/0:20,0:17:48.64:0,49,2966	0/0:13,0:12:33.11:0,33,2016	0/0:14,0:13:39.09:0,39,1357	0/0:16,0:16:31.96:0,32,1457	0/0:31,0:29:67.81:0,68,3835	0/1:8,12:20:0.38:0,0,1	0/0:7,13:20:0.21:0,0,3	0/1:6,13:18:0:1,0,0	0/0:17,0:17:19.48:0,19,790	0/0:24,0:22:66.18:0,66,2995	0/0:31,0:29:71.84:0,72,3996	0/0:18,0:16:34.64:0,35,1624
chr10	75289796	.	GCACA	G	279.54	PASS	AB=0.912;AC=8;AF=0.167;AN=48;BaseQRankSum=2.472;DP=544;FS=7.610;HRun=0;HaplotypeScore=119.9306;InbreedingCoeff=0.2458;MQ=50.79;MQ0=16;MQRankSum=1.729;QD=1.82;ReadPosRankSum=1.124;VQSLOD=1.6373;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:6.43:6,0,338	0/0:8,0:8:6.02:0,6,77	./.	./.	0/0:18,0:16:18.06:0,18,368	0/0:16,0:15:15.05:0,15,319	0/0:27,1:31:26.32:0,26,346	0/0:20,0:20:3.06:0,3,8	1/1:10,4:15:2.84:46,3,0	0/0:14,0:14:13.84:0,14,226	./.	0/1:14,1:14:40.10:40,0,62	1/1:18,3:21:8.76:138,9,0	0/0:11,0:9:15.03:0,15,302	0/0:10,0:10:9.03:0,9,179	0/0:14,0:15:18.05:0,18,270	0/1:35,1:36:0.74:1,0,779	0/0:24,0:23:17.82:0,18,256	0/0:17,0:16:19.23:0,19,277	0/0:10,1:11:11.55:0,12,185	0/0:31,0:34:34.38:0,34,529	0/0:16,0:16:3:0,3,29	./.	0/1:22,10:32:42.99:166,0,43	0/0:17,0:17:9.03:0,9,166	0/0:14,0:14:8.99:0,9,160	0/0:14,0:15:20.54:0,21,316	0/0:6,0:7:8.77:0,9,152
chr10	75291179	.	CAGAG	C	2006.62	PASS	AB=0.974;AC=12;AF=0.214;AN=56;BaseQRankSum=6.975;DP=735;FS=0.498;HRun=0;HaplotypeScore=181.7314;InbreedingCoeff=0.7529;MQ=58.56;MQ0=16;MQRankSum=1.133;QD=9.93;ReadPosRankSum=1.002;VQSLOD=2.8153;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:52,6:58:15.29:582,15,0	0/0:3,0:3:9.02:0,9,148	0/0:39,0:24:26.91:0,27,641	0/0:60,0:31:71.56:0,72,1418	0/0:21,0:21:57.20:0,57,1395	0/0:20,0:20:53.97:0,54,1146	0/0:25,0:25:65.77:0,66,1421	0/0:34,0:33:79.59:0,80,1630	0/1:35,2:37:66.98:290,0,67	0/0:27,0:27:78.26:0,78,1771	0/0:16,0:16:42.13:0,42,948	1/1:25,1:26:12.65:390,13,0	0/1:14,0:14:15.63:246,0,16	0/0:29,0:29:75.23:0,75,1809	0/0:22,0:22:59.98:0,60,1444	0/0:26,0:26:75.24:0,75,1717	0/0:33,0:34:92.75:0,93,2150	0/0:15,0:15:42.14:0,42,982	0/0:28,0:26:72.22:0,72,1494	0/0:26,0:26:75.23:0,75,1705	0/0:36,0:35:93.25:0,93,1984	1/1:16,3:19:11.14:182,11,0	1/1:17,3:20:12.76:143,13,0	1/1:26,2:28:22.61:348,23,0	0/0:16,0:16:33.10:0,33,770	0/0:32,0:32:84.27:0,84,1935	0/0:18,0:18:48.13:0,48,1046	0/0:5,0:5:15.05:0,15,323
chr10	75291189	.	CAG	C	615.83	PASS	AB=0.818;AC=12;AF=0.214;AN=56;BaseQRankSum=11.625;DP=706;FS=1.076;HRun=0;HaplotypeScore=159.6360;InbreedingCoeff=0.6911;MQ=55.44;MQ0=18;MQRankSum=3.370;QD=3.31;ReadPosRankSum=5.931;VQSLOD=2.5263;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:47,8:55:29.83:218,30,0	0/0:2,0:2:3.01:0,3,55	0/0:32,0:19:26.54:0,27,571	0/0:58,0:33:66.26:0,66,1228	0/0:25,0:25:63.17:0,63,1064	0/0:16,0:16:42.14:0,42,762	0/0:26,0:26:64.40:0,64,1027	0/0:33,0:31:76.61:0,77,1276	0/1:27,6:33:9.54:216,0,10	0/0:24,0:24:63.20:0,63,1055	0/0:17,0:17:48.13:0,48,794	1/1:20,3:23:8.13:102,8,0	0/1:11,4:15:55.47:83,0,55	0/0:25,0:25:69.24:0,69,1235	0/0:26,0:26:72.04:0,72,1235	0/0:28,0:28:81.28:0,81,1402	0/0:45,0:45:99:0,115,1915	0/0:15,0:15:42.14:0,42,733	0/0:24,0:22:66.18:0,66,1046	0/0:26,0:26:69.24:0,69,1225	0/0:37,0:36:96.26:0,96,1639	1/1:16,1:17:7.41:50,7,0	1/1:15,1:16:5.72:48,6,0	1/1:26,1:27:8.68:63,9,0	0/0:13,0:13:30.10:0,30,524	0/0:27,0:27:75.26:0,75,1341	0/0:15,0:15:45.14:0,45,730	0/0:5,0:5:15.02:0,15,208
chr10	75291221	.	C	CAGAGAC	1086.71	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=8.796;DP=769;FS=0.659;HRun=0;HaplotypeScore=228.9414;InbreedingCoeff=0.5581;MQ=64.61;MQ0=8;MQRankSum=-0.700;QD=4.15;ReadPosRankSum=-0.584;VQSLOD=2.5497;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:51,0:51:8.66:90,9,0	0/0:2,0:2:6.02:0,6,117	0/0:53,0:32:56.04:0,56,896	0/1:72,0:43:9.75:10,0,868	0/0:26,0:26:69.19:0,69,1269	0/0:14,0:14:42.08:0,42,726	0/0:31,0:31:80.94:0,81,1433	0/0:32,0:32:69.20:0,69,1265	1/1:34,0:34:21.91:531,22,0	0/0:26,0:25:72.22:0,72,1360	0/0:18,0:18:45.14:0,45,883	1/1:24,9:34:10.18:165,10,0	0/1:17,0:17:47.88:302,0,48	0/0:27,0:27:72.23:0,72,1364	0/0:26,0:26:68.97:0,69,1341	0/0:29,0:29:81.24:0,81,1664	0/0:38,0:38:99:0,102,2030	0/0:13,0:13:36.06:0,36,637	0/0:24,0:24:57.08:0,57,927	0/0:15,0:15:42.13:0,42,822	0/0:44,0:44:99:0,114,2356	1/1:24,0:24:3.07:42,3,0	0/0:22,0:22:3.90:0,4,8	0/1:30,0:30:14.19:103,0,14	0/0:17,0:17:39.09:0,39,769	0/0:30,0:30:78.25:0,78,1536	0/0:15,0:15:39.13:0,39,780	0/0:5,0:5:12.04:0,12,246
chr10	75291779	.	TACTCACACACACACAC	T	1123.35	PASS	AB=0.840;AC=9;AF=0.161;AN=56;BaseQRankSum=9.990;DP=493;FS=5.044;HRun=0;HaplotypeScore=199.5164;InbreedingCoeff=0.5821;MQ=69.75;MQ0=9;MQRankSum=-3.298;QD=8.64;ReadPosRankSum=1.001;VQSLOD=2.1543;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:6.02:269,6,0	0/0:5,0:5:13.26:0,13,462	0/0:25,0:14:36.09:0,36,407	0/0:26,0:23:58.73:0,59,556	0/0:15,0:15:45.02:0,45,1098	0/0:8,0:8:21.03:0,21,849	0/0:15,0:14:29.98:0,30,926	0/0:12,0:11:29.92:0,30,286	1/1:24,0:26:6.52:322,7,0	0/0:19,0:19:57.12:0,57,2389	0/0:9,0:9:21.02:0,21,561	0/1:17,0:16:50.84:214,0,51	1/1:15,0:14:18.78:140,19,0	0/0:13,0:13:36.03:0,36,765	0/0:18,0:18:48.05:0,48,1177	0/0:20,0:20:51.02:0,51,1107	0/0:27,0:27:66.10:0,66,2760	0/0:13,0:11:32.99:0,33,1105	0/0:14,0:14:41.67:0,42,933	0/0:10,0:9:24.07:0,24,1500	0/0:30,0:30:71.71:0,72,1941	0/0:2,0:13:3.01:0,3,37	0/1:1,0:14:0:0,0,0	0/1:28,0:28:77:318,0,77	0/0:15,0:14:38.99:0,39,1077	0/0:23,0:23:68.86:0,69,2349	0/0:24,0:23:64.77:0,65,2050	0/0:8,0:8:21.01:0,21,715
chr10	75292277	.	C	CTTGGTTTTTTGTTT	6088.89	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=9.522;DP=405;FS=5.469;HRun=0;HaplotypeScore=183.6188;InbreedingCoeff=0.8668;MQ=68.80;MQ0=3;MQRankSum=-10.470;QD=62.13;ReadPosRankSum=2.110;VQSLOD=4.4605;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:17:36.07:892,36,0	0/0:6,0:6:12.03:0,12,377	0/0:23,0:12:20.67:0,21,303	0/1:12,0:8:19.93:20,0,221	0/0:22,0:22:66.16:0,66,2100	0/0:14,0:14:42.13:0,42,1400	0/0:10,0:11:24.08:0,24,822	0/0:23,0:24:48.10:0,48,1501	1/1:9,0:9:21.07:501,21,0	0/0:21,0:21:51.16:0,51,1677	0/0:21,0:21:54.18:0,54,1642	1/1:10,1:12:30.10:794,30,0	1/1:2,3:5:12.04:499,12,0	0/0:11,0:11:27.09:0,27,715	0/0:11,0:11:21.02:0,21,392	0/0:7,0:7:21.06:0,21,693	0/0:26,0:26:40.84:0,41,1569	0/0:15,0:15:39.10:0,39,1096	0/0:17,0:15:42.08:0,42,946	0/0:11,0:11:27.08:0,27,791	0/0:14,0:14:42.13:0,42,1120	1/1:10,2:12:36.12:1428,36,0	1/1:11,0:11:30.10:951,30,0	1/1:18,1:19:38.96:1004,39,0	0/0:22,0:22:38.48:0,38,1915	0/0:13,0:13:33.11:0,33,773	0/0:17,0:17:42.14:0,42,1296	0/0:1,0:1:3.01:0,3,67
chr10	75292280	.	G	GT	512.60	PASS	AB=0.907;AC=24;AF=0.429;AN=56;BaseQRankSum=5.718;DP=423;FS=7.188;HRun=16;HaplotypeScore=76.6469;InbreedingCoeff=0.3771;MQ=70.54;MQ0=3;MQRankSum=-5.613;QD=2.32;ReadPosRankSum=0.841;VQSLOD=-0.7091;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:16:8.53:46,9,0	0/1:4,2:6:22.92:28,0,23	0/0:24,0:13:7.56:0,8,33	0/0:12,0:9:5.85:0,6,29	0/0:21,0:24:47.96:0,48,245	0/0:16,0:16:28.93:0,29,161	0/1:12,0:12:8.09:8,0,54	0/0:21,1:24:2.79:0,3,122	1/1:10,0:10:8.60:46,9,0	0/0:17,0:21:31.15:0,31,155	0/1:18,2:22:10.34:10,0,125	1/1:13,0:13:14.48:83,14,0	1/1:6,0:6:8.56:43,9,0	0/0:9,0:10:7.57:0,8,39	1/1:6,10:16:2.99:24,3,0	0/0:9,0:9:11.31:0,11,66	0/1:15,13:30:18.68:95,0,19	0/1:12,1:15:26.51:27,0,56	0/0:17,0:17:13.58:0,14,75	0/0:10,0:10:14.40:0,14,82	0/0:15,0:16:19.16:0,19,104	1/1:12,0:12:25.89:134,26,0	1/1:10,0:10:14.43:76,14,0	1/1:17,0:17:11.52:61,12,0	0/1:19,1:21:2.18:2,0,131	0/1:13,0:13:11.09:11,0,36	0/0:13,0:15:21.28:0,21,109	0/1:1,0:1:0:0,0,0
chr10	75292285	.	T	TG	629.02	PASS	AB=0.762;AC=7;AF=0.125;AN=56;BaseQRankSum=7.737;DP=439;FS=15.609;HRun=0;HaplotypeScore=76.0456;InbreedingCoeff=-0.0432;MQ=72.98;MQ0=3;MQRankSum=-7.993;QD=7.23;ReadPosRankSum=3.513;VQSLOD=2.4348;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:18,2:19:67.35:67,0,104	0/0:6,0:6:13.73:0,14,125	0/0:26,0:14:21.75:0,22,187	0/0:15,0:11:8.42:0,8,115	0/0:23,0:23:69.09:0,69,780	0/0:20,0:20:54.10:0,54,608	0/0:12,0:12:34.29:0,34,353	0/0:24,0:24:70.58:0,71,738	0/1:7,3:10:61.61:88,0,62	0/0:20,0:20:60.05:0,60,647	0/0:23,0:23:66.65:0,67,696	0/1:9,4:13:76.52:77,0,79	0/1:6,1:7:2.49:67,0,2	0/0:11,0:11:27:0,27,265	0/0:16,0:16:19.07:0,19,161	0/0:8,0:8:24.05:0,24,276	0/0:28,0:28:45.80:0,46,398	0/0:17,0:17:44.52:0,45,430	0/0:20,0:18:54.03:0,54,543	0/0:11,0:11:33.06:0,33,368	0/0:16,0:16:48.04:0,48,508	0/1:5,7:12:23.03:209,0,23	0/1:5,5:10:65.37:133,0,65	0/1:9,6:15:17.05:117,0,17	0/0:21,0:21:59.55:0,60,659	0/0:16,0:16:46.58:0,47,445	0/0:16,0:16:45.02:0,45,475	0/0:3,0:3:8.98:0,9,73
chr10	75292291	.	T	TGTTTTTGTTTTTG	8044.85	PASS	AB=0.977;AC=14;AF=0.250;AN=56;BaseQRankSum=11.928;DP=433;FS=4.603;HRun=0;HaplotypeScore=204.5000;InbreedingCoeff=0.7830;MQ=73.18;MQ0=3;MQRankSum=-10.825;QD=79.65;ReadPosRankSum=6.660;VQSLOD=4.2396;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:38.75:876,0,39	0/0:6,0:6:15.51:0,16,417	0/0:26,0:14:23.52:0,24,213	0/1:15,0:11:26.63:27,0,114	0/0:24,0:24:66.20:0,66,2065	0/0:18,0:18:54.14:0,54,1393	0/0:13,0:13:39.10:0,39,894	0/0:25,0:25:75.21:0,75,1584	1/1:9,0:9:13.34:687,13,0	0/0:18,0:18:54.15:0,54,1451	0/0:24,0:24:68.16:0,68,1580	1/1:10,1:12:30.10:1329,30,0	1/1:4,3:7:14.94:562,15,0	0/0:10,0:10:29.99:0,30,528	0/0:15,0:15:17.96:0,18,232	0/0:10,0:10:27.06:0,27,663	0/0:29,0:29:57.95:0,58,1159	0/0:16,0:16:45.09:0,45,1092	0/0:17,0:15:44.90:0,45,902	0/0:11,0:11:33.09:0,33,738	0/0:16,0:16:48.07:0,48,1032	1/1:12,2:14:36.06:1838,36,0	1/1:11,0:11:30.07:1484,30,0	1/1:11,1:12:13.26:1242,13,0	0/0:21,0:21:63.17:0,63,1938	0/0:16,0:16:46.90:0,47,765	0/0:14,0:14:39.05:0,39,999	0/0:3,0:3:9.01:0,9,128
chr10	75292327	.	A	AGT	1587.46	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.092;DP=326;FS=10.069;HRun=0;HaplotypeScore=59.3136;InbreedingCoeff=0.9420;MQ=93.00;MQ0=0;MQRankSum=-9.201;QD=36.08;ReadPosRankSum=3.668;VQSLOD=5.6380;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,8:11:17.99:332,18,0	0/0:7,0:7:18.06:0,18,294	0/0:18,0:18:49.71:0,50,746	0/0:18,0:18:46.90:0,47,632	0/0:22,0:22:66.23:0,66,1073	0/0:17,0:17:51.14:0,51,781	0/0:12,0:12:33.11:0,33,538	0/0:20,0:20:57.18:0,57,885	1/1:1,6:7:18.06:333,18,0	0/0:10,0:10:30.10:0,30,468	0/0:14,0:14:42.14:0,42,685	1/1:0,7:8:21.07:366,21,0	1/1:0,4:4:12.04:218,12,0	0/0:6,0:6:18.06:0,18,294	0/0:11,0:11:18.06:0,18,294	0/0:12,0:12:36.12:0,36,587	0/0:21,0:21:51.17:0,51,832	0/0:14,0:14:39.13:0,39,634	0/0:11,0:11:33.11:0,33,539	0/0:11,0:11:33.11:0,33,538	0/0:21,0:21:60.13:0,60,900	1/1:0,6:6:18.06:310,18,0	1/1:0,2:2:6.02:106,6,0	1/1:0,6:6:5.55:109,6,0	0/0:14,0:14:42.14:0,42,685	0/0:8,0:8:24.08:0,24,392	0/0:8,0:8:24.08:0,24,392	0/0:7,0:7:21.07:0,21,343
chr10	75292329	.	A	AGG	1679.43	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.405;DP=337;FS=11.077;HRun=0;HaplotypeScore=62.8044;InbreedingCoeff=0.9450;MQ=91.16;MQ0=0;MQRankSum=-9.677;QD=34.99;ReadPosRankSum=2.917;VQSLOD=5.6059;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,8:13:23.96:367,24,0	0/0:6,0:6:18.06:0,18,294	0/0:17,0:17:51.12:0,51,766	0/0:19,0:19:48.64:0,49,674	0/0:22,0:22:66.21:0,66,1052	0/0:16,0:16:48.16:0,48,779	0/0:12,0:12:36.12:0,36,584	0/0:20,0:20:57.18:0,57,904	1/1:3,6:9:24.07:414,24,0	0/0:9,0:9:27.09:0,27,419	0/0:15,0:15:42.14:0,42,685	1/1:1,7:8:21.07:362,21,0	1/1:0,4:4:12.04:218,12,0	0/0:6,0:6:18.06:0,18,294	0/0:11,0:11:18.04:0,18,293	0/0:13,0:13:36.12:0,36,587	0/0:23,0:23:54.16:0,54,850	0/0:14,0:14:42.10:0,42,655	0/0:12,0:12:36.12:0,36,586	0/0:12,0:12:33.11:0,33,538	0/0:22,0:22:60.20:0,60,962	1/1:0,6:6:18.06:314,18,0	1/1:0,2:2:6.02:106,6,0	1/1:0,6:6:5.55:86,6,0	0/0:14,0:14:42.13:0,42,662	0/0:8,0:8:24.08:0,24,392	0/0:9,0:9:27.08:0,27,416	0/0:9,0:9:27.06:0,27,390
chr10	75292680	.	G	GA	67.16	PASS	AB=1.000;AC=9;AF=0.173;AN=52;BaseQRankSum=5.265;DP=499;FS=15.688;HRun=0;HaplotypeScore=74.6015;InbreedingCoeff=0.6772;MQ=74.95;MQ0=1;MQRankSum=-3.671;QD=2.04;ReadPosRankSum=1.905;VQSLOD=0.9515;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:0.95:7,1,0	0/0:8,0:8:24.05:0,24,315	0/1:20,0:17:16.39:16,0,284	0/0:19,0:12:25.76:0,26,223	0/0:21,0:21:60.18:0,60,810	0/0:19,0:19:57.16:0,57,747	0/0:16,0:16:48.15:0,48,650	0/0:27,0:27:81.23:0,81,1067	1/1:2,2:5:9.25:80,9,0	0/0:33,0:33:99:0,99,1299	0/0:30,0:30:87.23:0,87,1141	1/1:1,1:3:5.60:37,6,0	0/0:1,0:1:2.80:0,3,13	0/0:23,0:23:68.99:0,69,870	0/0:28,0:28:81.20:0,81,1033	0/0:19,0:19:54.15:0,54,718	0/0:33,0:33:96.32:0,96,1329	0/0:24,0:23:66.15:0,66,871	0/0:31,0:31:84.14:0,84,1125	0/0:26,0:26:75.25:0,75,1029	0/0:16,0:16:42.14:0,42,585	./.	./.	1/1:0,3:3:6.01:57,6,0	0/0:13,0:13:36.10:0,36,471	0/0:26,0:26:75.22:0,75,1002	0/0:39,0:39:99:0,114,1491	0/0:14,0:14:38.81:0,39,472
chr10	75293574	.	T	TA	5538.43	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=17.802;DP=680;FS=13.693;HRun=0;HaplotypeScore=113.8499;InbreedingCoeff=0.9993;MQ=81.27;MQ0=0;MQRankSum=-16.749;QD=35.73;ReadPosRankSum=0.667;VQSLOD=3.2288;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,40:42:99:1600,117,0	0/0:10,0:10:30.07:0,30,398	0/0:21,0:21:61.06:0,61,822	0/0:25,0:25:72.21:0,72,945	0/0:23,0:23:69.23:0,69,964	0/0:21,0:21:63.21:0,63,880	0/0:25,0:25:72.24:0,72,1007	0/0:32,0:32:93.30:0,93,1286	1/1:3,15:18:45.81:692,46,0	0/0:44,0:44:99:0,129,1792	0/0:19,0:19:57.17:0,57,778	1/1:1,20:21:63.20:855,63,0	1/1:1,17:18:45.82:680,46,0	0/0:19,0:19:57.19:0,57,796	0/0:31,0:31:93.31:0,93,1300	0/0:20,0:20:60.20:0,60,839	0/0:45,0:45:99:0,135,1886	0/0:29,0:29:87.27:0,87,1196	0/0:19,0:19:57.17:0,57,777	0/0:27,0:27:81.27:0,81,1132	0/0:36,0:36:99:0,108,1492	1/1:1,23:24:66.11:865,66,0	1/1:1,14:15:39.13:524,39,0	1/1:2,15:17:23.68:322,24,0	0/0:17,0:17:51.16:0,51,696	0/0:28,0:28:81.26:0,81,1118	0/0:25,0:25:75.23:0,75,1030	0/0:9,0:9:27.09:0,27,377
chr10	75293576	.	T	TC	5690.38	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=18.033;DP=692;FS=7.417;HRun=1;HaplotypeScore=122.6477;InbreedingCoeff=0.9992;MQ=82.17;MQ0=0;MQRankSum=-16.930;QD=33.47;ReadPosRankSum=0.362;VQSLOD=3.8704;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,40:45:99:1649,123,0	0/0:9,0:9:24.08:0,24,336	0/0:21,0:21:58.08:0,58,795	0/0:27,0:27:78.22:0,78,1051	0/0:24,0:24:72.23:0,72,990	0/0:21,0:21:63.21:0,63,881	0/0:25,0:25:75.25:0,75,1044	0/0:31,0:31:93.30:0,93,1285	1/1:6,15:21:46.54:663,47,0	0/0:43,0:43:99:0,126,1751	0/0:18,0:18:54.18:0,54,753	1/1:2,20:22:63.21:865,63,0	1/1:2,16:18:54.18:724,54,0	0/0:19,0:19:57.19:0,57,797	0/0:31,0:31:93.31:0,93,1301	0/0:20,0:20:60.20:0,60,839	0/0:44,0:44:99:0,129,1804	0/0:29,0:29:87.27:0,87,1197	0/0:16,0:16:48.15:0,48,654	0/0:30,0:30:87.26:0,87,1168	0/0:37,0:37:99:0,105,1451	1/1:5,23:28:69.18:906,69,0	1/1:3,14:17:38.90:522,39,0	1/1:4,15:19:26.69:362,27,0	0/0:16,0:16:48.16:0,48,671	0/0:27,0:27:81.27:0,81,1131	0/0:25,0:25:75.23:0,75,1029	0/0:9,0:9:27.09:0,27,377
chr10	75295237	.	GA	G	4582.74	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.567;DP=397;FS=39.034;HRun=1;HaplotypeScore=52.9482;InbreedingCoeff=0.9521;MQ=75.69;MQ0=0;MQRankSum=-4.852;QD=38.51;ReadPosRankSum=3.762;VQSLOD=2.3069;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:40:99:1465,105,0	0/0:1,0:1:3.01:0,3,48	0/0:16,0:16:48.16:0,48,758	0/0:13,0:13:29.74:0,30,533	0/0:11,0:11:33.10:0,33,504	0/0:15,0:15:42.14:0,42,667	0/0:22,0:22:63.21:0,63,1007	0/0:20,0:20:57.19:0,57,909	1/1:0,22:22:63.21:880,63,0	0/0:14,0:14:39.13:0,39,618	0/0:5,0:5:15.05:0,15,240	1/1:0,10:10:24.08:335,24,0	1/1:0,9:9:27.09:377,27,0	0/0:11,0:11:30.09:0,30,456	0/0:5,0:5:12.04:0,12,192	0/0:10,0:10:30.10:0,30,480	0/0:18,0:18:54.18:0,54,862	0/0:13,0:13:39.13:0,39,623	0/0:10,0:10:30.09:0,30,438	0/0:7,0:7:21.07:0,21,336	0/0:58,0:58:99:0,175,2700	1/1:0,13:13:36.08:479,36,0	1/1:0,9:9:27.09:377,27,0	1/1:0,16:16:48.16:670,48,0	0/0:7,0:7:21.07:0,21,331	0/0:10,0:10:30.10:0,30,480	0/0:8,0:8:24.08:0,24,384	0/0:4,0:4:12.04:0,12,192
chr10	75295308	.	C	CCCCT	1310.77	PASS	AB=1.000;AC=15;AF=0.288;AN=52;BaseQRankSum=5.545;DP=207;FS=18.391;HRun=0;HaplotypeScore=60.6231;InbreedingCoeff=0.6532;MQ=89.49;MQ0=2;MQRankSum=-5.405;QD=34.49;ReadPosRankSum=0.285;VQSLOD=1.7683;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,4:17:42.02:773,42,0	1/1:0,0:1:2.37:8,2,0	0/0:27,0:16:28.39:0,28,375	0/0:40,0:18:41.26:0,41,583	./.	0/0:4,0:4:11.71:0,12,199	0/0:8,0:9:14.77:0,15,371	0/0:15,0:14:18.48:0,18,477	1/1:5,2:7:21:320,21,0	0/0:9,0:9:24.96:0,25,466	0/0:3,0:3:3.01:0,3,63	1/1:0,2:2:6.02:136,6,0	1/1:1,0:1:2.88:15,3,0	0/0:4,0:4:12.04:0,12,250	0/0:5,0:5:15.04:0,15,275	0/0:5,0:6:15:0,15,270	0/0:7,0:7:16.59:0,17,246	0/0:2,0:2:5.98:0,6,83	0/0:6,0:6:14.01:0,14,196	0/0:3,0:3:6.02:0,6,86	0/0:15,0:17:35.88:0,36,649	1/1:1,2:3:8.98:149,9,0	1/1:2,0:2:3.01:52,3,0	0/1:5,0:5:20.85:21,0,21	0/0:3,0:3:6.01:0,6,88	0/0:5,0:5:15.05:0,15,304	0/0:4,0:4:9.01:0,9,149	./.
chr10	75295559	.	C	CT	2112.86	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.795;DP=535;FS=14.324;HRun=8;HaplotypeScore=77.2700;InbreedingCoeff=0.9827;MQ=65.69;MQ0=5;MQRankSum=-5.319;QD=19.21;ReadPosRankSum=0.740;VQSLOD=2.3613;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:24:40.29:523,40,0	0/0:4,0:4:12.01:0,12,109	0/0:31,0:21:47.86:0,48,419	0/0:47,1:32:48.53:0,49,582	0/0:13,0:14:41.02:0,41,351	0/0:20,0:20:54.03:0,54,494	0/0:25,0:25:56.99:0,57,516	0/0:31,0:31:65.76:0,66,581	1/1:3,7:13:11.83:213,12,0	0/0:18,0:18:42.02:0,42,384	0/0:11,0:11:32.98:0,33,294	1/1:1,7:10:16.15:243,16,0	1/1:2,10:14:29.52:374,30,0	0/0:12,0:12:33.02:0,33,302	0/0:29,0:29:84.02:0,84,760	0/0:19,1:20:19.45:0,19,432	0/0:24,0:24:56.99:0,57,510	0/0:18,0:18:51.01:0,51,466	0/0:13,0:13:36.02:0,36,329	0/0:22,0:22:60.03:0,60,549	0/0:25,0:25:69.02:0,69,626	1/1:5,8:14:17.20:235,17,0	1/1:4,10:14:27.08:311,27,0	1/1:4,14:20:31.95:410,32,0	0/0:12,0:12:36.02:0,36,329	0/0:18,0:19:56.07:0,56,500	0/0:16,0:16:48.02:0,48,435	0/0:11,0:11:30.01:0,30,275
chr10	75296363	.	GTGTTTTCGTTTTAAATTC	G	7445.75	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.585;DP=587;FS=12.328;HRun=0;HaplotypeScore=273.4866;InbreedingCoeff=0.9850;MQ=81.12;MQ0=0;MQRankSum=-11.725;QD=73.72;ReadPosRankSum=3.452;VQSLOD=3.1363;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,14:27:36.12:1531,36,0	0/0:12,0:12:33.11:0,33,2693	0/0:18,0:18:42.14:0,42,3036	0/0:16,0:16:31.92:0,32,1876	0/0:31,0:31:84.29:0,84,6995	0/0:22,0:22:60.21:0,60,4538	0/0:27,0:27:72.23:0,72,4211	0/0:39,0:39:99:0,108,7473	1/1:2,10:12:24.08:1214,24,0	0/0:30,0:30:90.31:0,90,6874	0/0:34,0:34:99:0,99,7144	1/1:5,6:11:15.05:759,15,0	1/1:5,11:16:24.08:1214,24,0	0/0:15,0:15:39.13:0,39,3254	0/0:18,0:18:48.16:0,48,3945	0/0:24,0:24:72.25:0,72,4768	0/0:22,0:22:66.20:0,66,4975	0/0:22,0:22:66.23:0,66,5012	0/0:20,0:20:42.14:0,42,3099	0/0:29,0:29:75.26:0,75,5875	0/0:18,0:18:42.14:0,42,3335	1/1:0,17:15:27.09:1302,27,0	1/1:2,8:10:24.08:1119,24,0	1/1:2,6:8:9.03:308,9,0	0/0:21,0:21:60.21:0,60,4802	0/0:23,0:23:60.16:0,60,4432	0/0:28,0:28:81.28:0,81,6068	0/0:17,0:17:51.18:0,51,3694
chr10	75296675	.	CTATTA	C	1257.58	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.864;DP=613;FS=0.652;HRun=0;HaplotypeScore=128.6600;InbreedingCoeff=0.9224;MQ=78.90;MQ0=0;MQRankSum=-9.656;QD=17.23;ReadPosRankSum=-0.618;VQSLOD=3.3749;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:5:12.02:153,12,0	0/0:6,0:6:18.05:0,18,495	0/0:26,0:26:78.27:0,78,2421	0/0:21,0:21:63.21:0,63,1878	0/0:30,0:30:87.30:0,87,2885	0/0:22,0:22:66.23:0,66,2195	0/0:33,0:33:99:0,99,3247	0/0:35,0:35:99:0,105,3418	1/1:0,7:5:15.05:231,15,0	0/0:28,0:28:84.29:0,84,2781	0/0:27,0:27:81.28:0,81,2623	1/1:0,12:8:24.07:327,24,0	1/1:0,13:10:30.10:440,30,0	0/0:18,0:18:54.19:0,54,1788	0/0:32,0:32:96.33:0,96,3117	0/0:24,0:24:72.25:0,72,2357	0/0:41,0:41:99:0,120,3931	0/0:10,0:10:27.09:0,27,841	0/0:19,0:19:57.20:0,57,1784	0/0:31,0:31:93.32:0,93,3040	0/0:32,0:31:96.32:0,96,2984	1/1:0,5:2:3.01:39,3,0	1/1:0,13:9:15.05:209,15,0	1/1:0,9:6:3.48:41,3,0	0/0:19,0:19:57.20:0,57,1825	0/0:34,0:34:99:0,102,3355	0/0:34,0:33:99:0,102,3366	0/0:18,0:18:54.19:0,54,1743
chr10	75296681	.	A	AGC	999.17	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.896;DP=610;FS=0.639;HRun=0;HaplotypeScore=93.3152;InbreedingCoeff=0.9099;MQ=78.32;MQ0=0;MQRankSum=-9.498;QD=12.98;ReadPosRankSum=-1.245;VQSLOD=3.1460;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:5:12.02:138,12,0	0/0:4,0:4:12.04:0,12,196	0/0:28,0:28:84.25:0,84,1292	0/0:18,0:18:54.18:0,54,826	0/0:29,0:29:84.29:0,84,1370	0/0:24,0:24:72.16:0,72,1139	0/0:34,0:34:99:0,99,1567	0/0:34,0:34:99:0,102,1662	1/1:1,7:6:15.05:186,15,0	0/0:27,0:27:81.28:0,81,1322	0/0:27,0:27:81.28:0,81,1315	1/1:1,12:9:23.81:263,24,0	1/1:1,13:11:33.08:372,33,0	0/0:18,0:18:54.09:0,54,800	0/0:32,0:32:96.29:0,96,1510	0/0:23,0:23:69.23:0,69,1102	0/0:40,0:40:99:0,117,1858	0/0:10,0:10:30.05:0,30,429	0/0:18,0:18:54.18:0,54,857	0/0:34,0:34:99:0,102,1612	0/0:29,0:28:87.28:0,87,1393	1/1:0,5:2:3.01:30,3,0	1/1:2,13:9:15.04:163,15,0	1/1:1,9:7:1.91:29,2,0	0/0:16,0:16:48.16:0,48,783	0/0:35,0:35:99:0,102,1611	0/0:37,0:36:99:0,111,1780	0/0:16,0:16:48.16:0,48,783
chr10	75296871	.	CCCACA	C	569.05	PASS	AB=0.983;AC=11;AF=0.196;AN=56;BaseQRankSum=7.417;DP=434;FS=8.819;HRun=0;HaplotypeScore=89.1578;InbreedingCoeff=0.5698;MQ=63.94;MQ0=3;MQRankSum=-5.111;QD=6.39;ReadPosRankSum=4.098;VQSLOD=0.9242;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,6:15:10.11:294,10,0	0/0:7,0:7:14.60:0,15,339	0/0:28,0:17:46.02:0,46,793	0/0:23,0:15:42.15:0,42,802	0/0:18,0:18:30.07:0,30,627	0/0:17,0:17:36.08:0,36,718	0/0:12,0:12:32.33:0,32,531	0/0:9,0:9:12.51:0,13,204	1/1:5,0:5:11.81:77,12,0	0/0:17,0:17:36.99:0,37,675	0/0:11,0:11:24.07:0,24,454	1/1:10,0:9:5.87:39,6,0	1/1:2,2:4:5.95:79,6,0	0/0:13,0:13:29.86:0,30,583	0/0:15,0:15:45.13:0,45,1148	0/0:17,0:17:39.11:0,39,873	0/0:25,0:25:63.11:0,63,1250	0/0:16,0:16:38.96:0,39,712	0/0:16,0:15:36.10:0,36,645	0/0:15,0:15:27.06:0,27,660	0/0:21,0:21:48.11:0,48,967	0/1:20,0:19:36.64:91,0,37	0/1:16,0:16:34.09:34,0,41	0/1:18,1:18:72.62:112,0,73	0/0:18,0:18:41.92:0,42,641	0/0:20,0:20:23.66:0,24,869	0/0:22,0:22:57.10:0,57,1045	0/0:5,0:5:15.04:0,15,342
chr10	75296872	.	CCACA	C	1187.31	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=5.997;DP=435;FS=0.000;HRun=0;HaplotypeScore=79.8753;InbreedingCoeff=0.9181;MQ=65.21;MQ0=3;MQRankSum=-4.777;QD=14.13;ReadPosRankSum=3.835;VQSLOD=2.9712;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,4:15:27.09:400,27,0	0/0:7,0:7:11.53:0,12,251	0/0:28,0:17:37.11:0,37,646	0/0:25,0:17:42.61:0,43,763	0/0:17,0:17:24.06:0,24,482	0/0:15,0:16:33.06:0,33,579	0/0:16,0:16:30.08:0,30,555	0/0:9,0:9:12.04:0,12,215	1/1:2,3:5:12.04:205,12,0	0/0:15,0:15:27.98:0,28,536	0/0:10,0:10:15.05:0,15,327	1/1:5,5:9:6.02:102,6,0	1/1:3,1:4:6.02:86,6,0	0/0:13,0:14:29.80:0,30,568	0/0:15,0:15:39.13:0,39,914	0/0:17,0:17:33.11:0,33,696	0/0:25,0:25:45.14:0,45,954	0/0:17,0:17:27.04:0,27,538	0/0:18,0:17:30.10:0,30,587	0/0:15,0:15:27.06:0,27,550	0/0:20,0:20:48.12:0,48,848	1/1:9,8:16:15.05:241,15,0	1/1:15,0:15:8.72:126,9,0	1/1:9,8:17:15.84:211,16,0	0/0:18,0:18:20.95:0,21,383	0/0:20,0:20:48.08:0,48,787	0/0:23,0:23:39.13:0,39,797	0/0:6,0:6:15.05:0,15,293
chr10	75296873	.	CACA	C	705.46	PASS	AB=0.754;AC=12;AF=0.214;AN=56;BaseQRankSum=7.624;DP=401;FS=0.722;HRun=0;HaplotypeScore=68.8955;InbreedingCoeff=0.7745;MQ=66.33;MQ0=3;MQRankSum=-5.598;QD=9.94;ReadPosRankSum=3.473;VQSLOD=2.9509;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,1:14:27.04:266,27,0	0/0:6,0:6:14.85:0,15,246	0/0:27,0:17:46.11:0,46,713	0/0:26,0:19:38.16:0,38,844	0/0:12,0:12:27.50:0,27,462	0/0:15,0:15:33.04:0,33,564	0/0:16,0:16:32.33:0,32,544	0/0:9,0:9:17.87:0,18,285	1/1:5,0:5:12.01:112,12,0	0/0:16,0:16:36.94:0,37,624	0/0:10,0:10:21:0,21,344	1/1:5,0:6:6.01:56,6,0	1/1:3,0:3:6.01:57,6,0	0/0:14,0:14:32.77:0,33,567	0/0:15,0:15:39.10:0,39,822	0/0:14,0:14:39.06:0,39,690	0/0:23,0:23:48.02:0,48,883	0/0:16,0:16:32.92:0,33,560	0/0:15,0:14:38.66:0,39,622	0/0:13,0:13:27.05:0,27,494	0/0:18,0:18:51.10:0,51,835	0/1:14,0:14:2.11:151,0,2	0/1:3,9:12:11.25:98,0,11	1/1:16,0:15:15.45:134,15,0	0/0:17,0:17:29.83:0,30,425	0/0:19,0:19:48.57:0,49,741	0/0:22,0:22:42.01:0,42,750	0/0:6,0:6:15.03:0,15,277
chr10	75297050	.	T	TC	5979.38	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-12.856;DP=652;FS=3.660;HRun=3;HaplotypeScore=63.4669;InbreedingCoeff=0.9992;MQ=85.71;MQ0=0;MQRankSum=-0.513;QD=35.38;ReadPosRankSum=4.727;VQSLOD=5.4129;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:66.17:926,66,0	0/0:9,0:9:24.08:0,24,297	0/0:26,0:25:66.18:0,66,786	0/0:28,0:28:81.19:0,81,945	0/0:21,0:21:54.16:0,54,656	0/0:15,0:15:39.12:0,39,483	0/0:25,0:25:69.19:0,69,830	0/0:31,0:31:84.26:0,84,1030	1/1:0,29:29:84.28:1210,84,0	0/0:23,0:23:60.19:0,60,743	0/0:17,0:17:45.14:0,45,556	1/1:1,18:19:48.16:691,48,0	1/1:0,8:8:24.08:346,24,0	0/0:17,0:17:51.16:0,51,632	0/0:24,0:24:69.22:0,69,856	0/0:22,0:22:66.20:0,66,804	0/0:25,0:25:72.20:0,72,876	0/0:23,0:23:57.18:0,57,707	0/0:18,0:18:51.15:0,51,620	0/0:39,0:39:99:0,114,1374	0/0:36,0:36:93.26:0,93,1123	1/1:0,21:21:45.15:648,45,0	1/1:1,32:31:78.26:1123,78,0	1/1:2,28:30:72.24:1037,72,0	0/0:17,0:17:45.14:0,45,558	0/0:32,0:32:90.27:0,90,1106	0/0:21,0:21:60.19:0,60,744	0/0:14,0:14:42.13:0,42,521
chr10	75297763	.	CTG	C	895.83	PASS	AB=0.868;AC=23;AF=0.442;AN=52;BaseQRankSum=6.414;DP=576;FS=2.361;HRun=0;HaplotypeScore=77.0621;InbreedingCoeff=0.0730;MQ=67.88;MQ0=13;MQRankSum=1.024;QD=2.95;ReadPosRankSum=3.045;VQSLOD=1.6729;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:2.73:0,3,12	0/1:9,1:10:12.42:12,0,211	./.	./.	0/0:18,0:17:11.98:0,12,115	0/0:28,0:28:18.06:0,18,258	0/1:14,4:18:47.64:48,0,157	0/0:23,0:22:11.95:0,12,149	1/1:8,7:16:8.86:80,9,0	1/1:16,0:20:11.69:88,12,0	1/1:9,3:13:8.86:80,9,0	1/1:12,4:15:3.01:33,3,0	0/1:12,4:16:35.92:57,0,36	0/1:18,4:22:2.73:3,0,348	0/1:11,4:15:68.47:68,0,244	0/1:16,0:16:20.72:21,0,99	0/1:27,0:27:0.68:1,0,389	0/0:23,0:22:12.39:0,12,418	0/1:25,0:24:16.10:16,0,64	0/0:13,0:13:9.01:0,9,113	0/0:43,0:43:10.86:0,11,198	1/1:7,4:11:9.02:98,9,0	1/1:10,8:16:12.03:131,12,0	0/1:8,10:18:23.80:176,0,24	0/0:18,0:18:21.50:0,21,252	0/0:26,0:25:5.99:0,6,67	0/1:22,3:23:99:130,0,181	0/1:13,3:16:20.78:21,0,122
chr10	75298054	.	TTC	T	1085.98	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.244;DP=455;FS=5.183;HRun=0;HaplotypeScore=65.2529;InbreedingCoeff=0.8724;MQ=57.89;MQ0=14;MQRankSum=-2.895;QD=14.48;ReadPosRankSum=-0.140;VQSLOD=2.8435;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:0.36:0,0,207	0/0:5,0:5:11.91:0,12,127	0/0:20,0:6:4.86:0,5,113	0/0:17,0:5:3.51:0,4,26	0/0:13,0:13:24.43:0,24,226	0/0:9,0:8:20.93:0,21,254	0/0:14,0:13:17.73:0,18,233	0/0:27,0:27:56.88:0,57,644	1/1:13,5:18:46.59:414,47,0	0/0:20,0:19:50.96:0,51,631	0/0:20,0:19:19.45:0,19,267	1/1:7,1:8:14.89:123,15,0	1/1:6,1:7:20.57:152,21,0	0/0:12,0:11:33.02:0,33,395	0/0:9,0:9:26.80:0,27,255	0/0:13,0:13:31.34:0,31,392	0/0:37,0:35:83.04:0,83,919	0/0:13,0:12:13.22:0,13,244	0/0:24,0:23:54.71:0,55,632	0/0:21,0:21:49.65:0,50,515	0/0:13,0:12:19.98:0,20,266	1/1:3,13:15:14.72:142,15,0	1/1:6,6:11:19.49:181,19,0	1/1:4,10:14:23.89:256,24,0	0/0:18,0:18:39.07:0,39,431	0/0:23,0:22:53.59:0,54,557	0/0:14,0:13:28.99:0,29,314	0/0:17,0:14:38.66:0,39,419
chr10	75298591	.	C	CTTTTA	8665.24	PASS	AB=0.962;AC=13;AF=0.232;AN=56;BaseQRankSum=10.450;DP=716;FS=12.682;HRun=0;HaplotypeScore=138.2168;InbreedingCoeff=0.9000;MQ=71.89;MQ0=0;MQRankSum=-15.378;QD=54.84;ReadPosRankSum=-4.067;VQSLOD=3.7933;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,132,2604	0/0:10,0:10:30.10:0,30,629	0/0:22,0:22:51.17:0,51,1048	0/0:13,0:13:36.12:0,36,675	0/0:19,0:19:54.19:0,54,1131	0/0:27,0:27:75.21:0,75,1527	0/0:32,0:32:90.31:0,90,1887	0/0:26,0:26:63.21:0,63,1284	1/1:6,27:34:87.30:2463,87,0	0/0:23,0:23:63.22:0,63,1323	0/0:21,0:21:60.18:0,60,1171	1/1:7,20:27:66.22:1917,66,0	1/1:6,22:30:75.26:2130,75,0	0/0:40,0:40:99:0,114,2355	0/0:42,0:42:99:0,117,2380	0/1:24,1:25:19.79:20,0,1354	0/0:40,0:40:99:0,114,2332	0/0:17,0:17:44.91:0,45,944	0/0:27,0:27:72.25:0,72,1485	0/0:14,0:14:39.04:0,39,691	0/0:38,0:38:99:0,111,2238	1/1:3,9:12:27.09:724,27,0	1/1:2,9:11:27.09:712,27,0	1/1:5,11:19:27.09:699,27,0	0/0:27,0:27:81.28:0,81,1678	0/0:32,0:32:84.24:0,84,1684	0/0:25,0:25:66.21:0,66,1341	0/0:10,0:10:30.10:0,30,630
chr10	75298877	.	C	CA	3060.47	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.196;DP=689;FS=16.763;HRun=1;HaplotypeScore=99.1463;InbreedingCoeff=0.9994;MQ=67.53;MQ0=0;MQRankSum=-13.335;QD=30.60;ReadPosRankSum=-0.032;VQSLOD=2.0650;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,1870	0/0:13,0:13:36.12:0,36,467	0/0:26,0:25:62.36:0,62,821	0/0:12,0:12:32.96:0,33,362	0/0:19,0:19:54.18:0,54,701	0/0:20,0:20:60.15:0,60,724	0/0:34,0:34:93.30:0,93,1207	0/0:21,0:21:60.18:0,60,754	1/1:2,14:16:42.10:596,42,0	0/0:40,0:40:99:0,111,1435	0/0:19,0:19:54.18:0,54,701	1/1:1,20:21:60.09:837,60,0	1/1:1,10:11:30.07:424,30,0	0/0:19,0:19:57.17:0,57,725	0/0:25,0:25:75.21:0,75,944	0/0:30,0:30:87.26:0,87,1103	0/0:36,0:36:99:0,102,1294	0/0:28,0:28:81.23:0,81,1020	0/0:22,0:22:60.19:0,60,769	0/0:35,0:35:99:0,105,1349	0/0:32,0:32:90.27:0,90,1142	1/1:1,14:15:42.01:564,42,0	1/1:5,9:14:24.04:325,24,0	1/1:2,21:23:41.90:502,42,0	0/0:35,0:35:99:0,102,1309	0/0:32,0:32:90.29:0,90,1165	0/0:26,0:25:78.24:0,78,999	0/0:15,0:15:45.10:0,45,551
chr10	75298882	.	C	CTG	4335.50	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.280;DP=673;FS=23.568;HRun=0;HaplotypeScore=108.8285;InbreedingCoeff=0.9994;MQ=71.08;MQ0=0;MQRankSum=-13.820;QD=44.70;ReadPosRankSum=-0.050;VQSLOD=3.6786;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,135,1988	0/0:12,0:12:36.12:0,36,530	0/0:29,0:28:75.25:0,75,1086	0/0:13,0:13:29.22:0,29,423	0/0:21,0:21:57.19:0,57,838	0/0:21,0:21:60.20:0,60,882	0/0:32,0:32:87.27:0,87,1239	0/0:24,0:24:66.20:0,66,917	1/1:4,13:17:45.15:839,45,0	0/0:40,0:40:99:0,114,1676	0/0:19,0:19:57.18:0,57,820	1/1:2,19:21:57.20:1062,57,0	1/1:2,8:10:27.09:487,27,0	0/0:18,0:18:54.17:0,54,776	0/0:24,0:24:72.24:0,72,1059	0/0:28,0:28:84.28:0,84,1237	0/0:34,0:34:99:0,102,1502	0/0:26,0:26:78.26:0,78,1137	0/0:23,0:23:66.20:0,66,935	0/0:35,0:35:99:0,105,1507	0/0:29,0:29:87.29:0,87,1281	1/1:1,12:14:36.12:663,36,0	1/1:1,12:13:27.09:504,27,0	1/1:8,14:22:42.14:781,42,0	0/0:32,0:32:93.31:0,93,1368	0/0:28,0:28:78.25:0,78,1122	0/0:26,0:25:78.25:0,78,1128	0/0:14,0:14:42.14:0,42,619
chr10	75298916	.	T	TTA	4397.87	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.600;DP=614;FS=4.636;HRun=0;HaplotypeScore=99.6195;InbreedingCoeff=0.9989;MQ=69.61;MQ0=0;MQRankSum=-12.488;QD=49.41;ReadPosRankSum=-2.059;VQSLOD=4.9265;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,2014	0/0:11,0:11:33.10:0,33,507	0/0:18,0:18:52.16:0,52,697	0/0:10,0:10:24.04:0,24,335	0/0:19,0:19:57.13:0,57,823	0/0:17,0:17:48.03:0,48,695	0/0:27,0:27:75.19:0,75,1117	0/0:23,0:23:69.16:0,69,1018	1/1:3,10:13:38.89:652,39,0	0/0:39,0:39:99:0,108,1679	0/0:26,0:26:78.19:0,78,1202	1/1:5,16:21:63.09:1157,63,0	1/1:2,8:10:27.04:498,27,0	0/0:15,0:15:45.12:0,45,679	0/0:25,0:25:75.19:0,75,1096	0/0:31,0:31:93.20:0,93,1313	0/0:24,0:24:69.15:0,69,1016	0/0:20,0:20:57.11:0,57,838	0/0:28,0:28:84.24:0,84,1287	0/0:21,0:22:63.86:0,64,918	0/0:31,0:31:90.11:0,90,1317	1/1:6,14:20:57.06:990,57,0	1/1:3,10:13:38.34:668,38,0	1/1:1,11:12:24:433,24,0	0/0:23,0:23:66.10:0,66,855	0/0:31,0:31:84.21:0,84,1286	0/0:26,0:25:78.25:0,78,1202	0/0:17,0:17:51.16:0,51,800
chr10	75299051	.	GACCTCTGA	G	5370.26	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.359;DP=565;FS=73.184;HRun=0;HaplotypeScore=151.5570;InbreedingCoeff=0.9968;MQ=64.70;MQ0=4;MQRankSum=-12.599;QD=61.03;ReadPosRankSum=-0.600;VQSLOD=1.5541;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,5148	0/0:9,0:9:27.09:0,27,1101	0/0:18,0:14:42.14:0,42,1529	0/0:13,0:12:35.99:0,36,1303	0/0:26,0:26:78.25:0,78,3284	0/0:14,0:14:42.14:0,42,1894	0/0:20,0:20:60.21:0,60,2406	0/0:29,0:28:78.20:0,78,3297	1/1:3,22:25:60.21:1696,60,0	0/0:23,0:23:69.24:0,69,2978	0/0:10,0:10:30.10:0,30,1299	1/1:1,14:15:33.05:900,33,0	1/1:3,8:11:21.07:614,21,0	0/0:18,0:18:54.19:0,54,2402	0/0:31,0:31:90.29:0,90,3774	0/0:30,0:30:90.31:0,90,3976	0/0:30,0:30:90.31:0,90,3909	0/0:29,0:29:84.22:0,84,3236	0/0:21,0:20:54.19:0,54,2356	0/0:15,0:15:45.15:0,45,1926	0/0:33,0:33:99:0,99,3967	1/1:2,9:11:27.09:790,27,0	1/1:1,7:8:18.06:526,18,0	1/1:4,14:18:29.84:844,30,0	0/0:21,0:20:60.21:0,60,2652	0/0:21,0:21:60.21:0,60,2720	0/0:14,0:14:42.14:0,42,1702	0/0:11,0:11:33.11:0,33,1415
chr10	75299735	.	GA	G	3445.14	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.039;DP=553;FS=18.746;HRun=2;HaplotypeScore=64.5818;InbreedingCoeff=0.9993;MQ=78.74;MQ0=0;MQRankSum=-2.898;QD=34.11;ReadPosRankSum=3.064;VQSLOD=1.9402;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.30:0,90,1346	0/0:9,0:9:27.06:0,27,382	0/0:12,0:12:36.12:0,36,527	0/0:14,0:14:36.11:0,36,500	0/0:15,0:15:42.14:0,42,629	0/0:13,0:13:39.13:0,39,585	0/0:25,0:25:75.25:0,75,1124	0/0:25,0:25:69.23:0,69,1012	1/1:2,11:12:30.10:389,30,0	0/0:19,0:19:57.19:0,57,849	0/0:18,0:18:54.18:0,54,809	1/1:0,16:16:45.15:583,45,0	1/1:0,13:13:39.13:506,39,0	0/0:27,0:27:78.23:0,78,1140	0/0:26,0:26:78.25:0,78,1150	0/0:24,0:24:72.22:0,72,1040	0/0:33,0:33:93.31:0,93,1385	0/0:21,0:21:63.20:0,63,923	0/0:17,0:17:51.16:0,51,736	0/0:30,0:30:87.27:0,87,1266	0/0:24,0:24:69.23:0,69,1016	1/1:0,16:16:45.14:572,45,0	1/1:0,19:19:45.15:584,45,0	1/1:0,24:24:63.20:811,63,0	0/0:9,0:9:27.09:0,27,405	0/0:25,0:25:75.25:0,75,1124	0/0:25,0:24:72.24:0,72,1079	0/0:11,0:11:33.11:0,33,489
chr10	75299802	.	TAA	T	1229.70	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=11.116;DP=511;FS=17.885;HRun=13;HaplotypeScore=83.0599;InbreedingCoeff=0.8626;MQ=68.96;MQ0=1;MQRankSum=-10.473;QD=15.77;ReadPosRankSum=2.688;VQSLOD=0.9582;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:63.13:0,63,816	0/0:9,0:9:24.08:0,24,345	0/1:19,0:12:13.77:14,0,125	0/0:23,0:10:5.78:0,6,50	0/0:18,0:22:47.33:0,47,562	0/0:20,0:26:70.17:0,70,870	0/0:14,0:14:30.39:0,30,364	0/0:35,0:35:83.87:0,84,1165	1/1:0,14:14:42.06:402,42,0	0/0:21,0:22:56.66:0,57,748	0/0:14,0:16:48.13:0,48,638	1/1:0,6:5:15.02:145,15,0	1/1:1,11:11:30.04:287,30,0	0/0:23,0:25:59.67:0,60,798	0/0:16,0:16:39.07:0,39,505	0/0:16,0:16:38.80:0,39,529	0/0:21,1:25:37.07:0,37,826	0/0:23,0:24:63.20:0,63,864	0/0:25,1:26:27.55:0,28,674	0/0:18,0:19:44.61:0,45,579	0/0:3,0:3:9.03:0,9,124	1/1:1,6:7:15.02:145,15,0	1/1:0,12:12:30.01:290,30,0	1/1:1,6:7:14.75:132,15,0	0/0:21,0:21:63.21:0,63,897	0/0:20,0:23:25.02:0,25,623	0/0:23,0:27:68.18:0,68,886	0/0:12,0:12:36.12:0,36,520
chr10	75300030	.	TACTG	T	5788.38	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.882;DP=618;FS=16.377;HRun=0;HaplotypeScore=108.3626;InbreedingCoeff=0.9989;MQ=85.39;MQ0=0;MQRankSum=-6.347;QD=41.64;ReadPosRankSum=3.051;VQSLOD=4.4708;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,2733	0/0:11,0:11:30.10:0,30,786	0/0:22,0:22:51.17:0,51,1231	0/0:19,0:19:48.16:0,48,1166	0/0:16,0:16:42.14:0,42,1082	0/0:15,0:15:45.15:0,45,1159	0/0:25,0:25:69.24:0,69,1797	0/0:27,0:27:78.27:0,78,2004	1/1:0,22:22:63.22:1143,63,0	0/0:19,0:19:54.19:0,54,1411	0/0:24,0:24:72.25:0,72,1886	1/1:1,26:27:57.20:1036,57,0	1/1:0,20:20:48.16:870,48,0	0/0:21,0:21:60.21:0,60,1567	0/0:23,0:23:60.21:0,60,1563	0/0:18,0:18:54.19:0,54,1408	0/0:29,0:29:81.25:0,81,2056	0/0:25,0:25:75.26:0,75,1907	0/0:27,0:27:63.22:0,63,1587	0/0:22,0:22:63.22:0,63,1619	0/0:20,0:20:54.19:0,54,1371	1/1:2,11:13:30.10:522,30,0	1/1:4,20:24:60.21:1072,60,0	1/1:2,31:33:63.18:1146,63,0	0/0:9,0:9:21.07:0,21,521	0/0:35,0:35:99:0,105,2709	0/0:25,0:25:69.19:0,69,1687	0/0:11,0:11:33.11:0,33,855
chr10	75300272	.	T	TG	4409.51	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.450;DP=622;FS=12.124;HRun=1;HaplotypeScore=80.8341;InbreedingCoeff=0.9785;MQ=87.60;MQ0=0;MQRankSum=-2.329;QD=39.37;ReadPosRankSum=4.436;VQSLOD=4.5643;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,1597	0/0:8,0:8:24.08:0,24,312	0/0:22,0:22:57.08:0,57,697	0/0:23,0:23:53.11:0,53,717	0/0:24,0:24:72.22:0,72,921	0/0:21,0:21:60.20:0,60,779	0/0:35,0:35:99:0,102,1304	0/0:34,0:33:93.30:0,93,1196	1/1:0,21:21:60.20:899,60,0	0/0:21,0:21:54.17:0,54,701	0/0:13,0:13:36.12:0,36,467	1/1:0,13:13:36.12:532,36,0	1/1:2,15:17:45.11:642,45,0	0/0:22,0:22:63.20:0,63,818	0/0:24,0:24:72.23:0,72,935	0/0:21,0:21:63.20:0,63,818	0/0:26,0:26:78.24:0,78,997	0/0:19,0:19:54.13:0,54,681	0/0:24,0:24:72.23:0,72,923	0/0:21,0:21:57.17:0,57,726	0/0:39,0:39:99:0,111,1439	1/1:1,15:16:39.13:584,39,0	1/1:1,16:17:39.12:584,39,0	1/1:2,26:28:78.26:1169,78,0	0/0:18,0:18:54.18:0,54,701	0/0:21,0:21:60.17:0,60,752	0/0:28,0:27:84.26:0,84,1078	0/0:2,0:2:6.02:0,6,78
chr10	75301129	.	TG	T	5235.89	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.051;DP=584;FS=8.075;HRun=1;HaplotypeScore=58.9588;InbreedingCoeff=0.9998;MQ=77.80;MQ0=0;MQRankSum=-0.494;QD=38.22;ReadPosRankSum=3.681;VQSLOD=5.2361;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1513	0/0:11,0:11:33.11:0,33,527	0/0:15,0:15:42.87:0,43,571	0/0:16,0:16:42.06:0,42,560	0/0:20,0:20:60.20:0,60,958	0/0:17,0:16:51.16:0,51,787	0/0:19,0:19:57.16:0,57,864	0/0:22,0:22:66.23:0,66,1055	1/1:0,22:22:63.21:881,63,0	0/0:27,0:27:81.28:0,81,1290	0/0:23,0:23:69.24:0,69,1103	1/1:0,19:19:57.19:797,57,0	1/1:0,23:23:63.21:880,63,0	0/0:26,0:26:78.27:0,78,1243	0/0:22,0:22:66.23:0,66,1055	0/0:13,0:13:39.13:0,39,612	0/0:30,0:30:87.28:0,87,1366	0/0:22,0:22:66.22:0,66,1045	0/0:18,0:18:51.16:0,51,792	0/0:28,0:28:84.29:0,84,1334	0/0:14,0:14:42.14:0,42,671	1/1:0,23:23:66.22:923,66,0	1/1:1,19:20:51.17:705,51,0	1/1:0,30:30:75.25:1049,75,0	0/0:19,0:19:57.19:0,57,911	0/0:18,0:18:54.18:0,54,864	0/0:23,0:23:69.22:0,69,1076	0/0:10,0:10:30.10:0,30,480
chr10	75305066	.	C	CAGGGGTTGG	2753.14	PASS	AB=0.779;AC=8;AF=0.143;AN=56;BaseQRankSum=4.262;DP=439;FS=65.792;HRun=0;HaplotypeScore=119.0044;InbreedingCoeff=0.3212;MQ=62.91;MQ0=12;MQRankSum=-7.224;QD=45.89;ReadPosRankSum=-1.047;VQSLOD=0.8665;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:58.14:0,58,1666	0/0:8,0:8:18.06:0,18,527	0/0:25,0:7:11.95:0,12,220	0/0:21,0:9:2.77:0,3,133	0/0:21,0:21:39.13:0,39,1098	0/0:11,0:11:30.10:0,30,836	0/0:7,0:7:18.06:0,18,521	0/0:20,0:19:39.13:0,39,1094	0/1:6,2:7:71.66:274,0,72	0/0:16,0:15:42.14:0,42,1230	0/0:15,0:14:36.12:0,36,1022	0/1:9,4:12:86.44:618,0,86	1/1:2,2:3:6.02:283,6,0	0/0:10,0:10:27.09:0,27,791	0/0:6,0:6:12.04:0,12,352	0/0:13,0:13:24.08:0,24,646	0/0:27,0:27:54.16:0,54,1487	0/0:28,0:27:66.23:0,66,1933	0/0:21,0:20:39.12:0,39,994	0/0:22,0:20:48.15:0,48,1299	0/0:13,0:13:30.10:0,30,823	1/1:4,4:7:12.04:560,12,0	0/1:10,4:11:69.77:683,0,70	0/1:9,1:11:69.84:474,0,70	0/0:13,0:10:24.08:0,24,704	0/0:20,0:20:51.18:0,51,1451	0/0:23,0:21:48.61:0,49,1284	0/0:8,0:7:18.05:0,18,465
chr10	75306138	.	CT	C	745.81	PASS	AB=0.955;AC=14;AF=0.250;AN=56;BaseQRankSum=9.676;DP=436;FS=4.995;HRun=10;HaplotypeScore=50.3283;InbreedingCoeff=0.7485;MQ=69.90;MQ0=1;MQRankSum=0.330;QD=11.13;ReadPosRankSum=-0.502;VQSLOD=2.4364;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:56.04:0,56,657	0/0:3,0:3:9.02:0,9,100	0/1:9,1:10:14.85:15,0,65	0/1:7,0:6:16.69:17,0,55	0/0:31,0:31:90.23:0,90,988	0/0:16,0:16:42.11:0,42,465	0/0:11,0:11:33.05:0,33,352	0/0:20,3:22:16.38:0,16,397	1/1:2,6:8:17.99:156,18,0	0/0:32,0:32:72.19:0,72,797	0/0:18,0:18:45.10:0,45,485	1/1:2,11:13:19.60:270,20,0	1/1:3,9:12:27.46:235,27,0	0/0:9,0:9:15.01:0,15,149	0/0:18,0:18:42.09:0,42,454	0/0:10,0:10:21.06:0,21,232	0/0:15,0:15:27.07:0,27,299	0/0:27,1:28:43.61:0,44,704	0/0:16,0:16:42.11:0,42,465	0/0:19,0:19:57.07:0,57,606	0/0:8,0:8:9.02:0,9,100	1/1:3,3:6:6.46:53,6,0	1/1:2,5:7:11.98:104,12,0	1/1:1,3:4:9:78,9,0	0/0:20,0:20:54.13:0,54,582	0/0:19,1:21:29.17:0,29,400	0/0:34,0:34:90.24:0,90,995	0/0:8,0:8:24.06:0,24,265
chr10	75306844	.	CTT	C	498.35	PASS	AB=0.889;AC=15;AF=0.268;AN=56;BaseQRankSum=7.704;DP=503;FS=5.670;HRun=16;HaplotypeScore=88.4968;InbreedingCoeff=0.8866;MQ=69.21;MQ0=6;MQRankSum=-5.874;QD=4.41;ReadPosRankSum=5.180;VQSLOD=-0.3901;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,22:30:39.97:343,40,0	0/0:5,0:5:12.04:0,12,157	0/0:30,0:10:6.01:0,6,73	0/0:26,0:11:12.39:0,12,98	0/0:18,0:25:55.18:0,55,526	0/0:16,0:21:26.76:0,27,313	0/0:11,0:13:17.41:0,17,186	0/0:32,1:33:32.31:0,32,578	1/1:11,0:11:10.59:45,11,0	0/0:18,0:19:33.10:0,33,418	0/0:16,0:17:36.36:0,36,425	1/1:10,0:10:10.63:45,11,0	1/1:11,0:11:13.25:57,13,0	0/1:7,0:8:3.50:6,0,4	0/0:8,0:10:26.39:0,26,288	0/0:10,0:10:27.03:0,27,330	0/0:22,0:25:61.13:0,61,609	0/0:11,0:14:30.08:0,30,362	0/0:19,0:20:40.31:0,40,344	0/0:24,1:25:32.41:0,32,566	0/0:16,0:24:43.97:0,44,482	1/1:14,0:14:18.61:79,19,0	1/1:14,0:14:15.35:67,15,0	1/1:15,0:15:10.62:45,11,0	0/0:18,0:20:34.68:0,35,339	0/0:18,0:19:41.39:0,41,378	0/0:18,0:20:46.87:0,47,548	0/0:7,0:10:23.36:0,23,247
chr10	75306846	.	TTTTTTTTTTTTTTTCC	T	3641.70	PASS	AB=0.647;AC=11;AF=0.196;AN=56;BaseQRankSum=8.302;DP=514;FS=7.412;HRun=0;HaplotypeScore=199.4250;InbreedingCoeff=0.8909;MQ=66.86;MQ0=7;MQRankSum=-7.637;QD=48.56;ReadPosRankSum=5.307;VQSLOD=2.3055;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:70.44:0,70,3547	0/0:5,0:5:12.04:0,12,896	0/0:31,0:10:21.07:0,21,487	0/0:24,0:9:14.41:0,14,210	0/0:27,0:27:78.27:0,78,4182	0/0:23,0:22:39.13:0,39,2248	0/0:13,0:12:22.61:0,23,1075	0/0:30,0:30:63.22:0,63,3395	1/1:5,6:11:11.84:493,12,0	0/0:20,0:20:42.14:0,42,2156	0/0:19,0:19:44.85:0,45,2558	1/1:7,4:11:11.75:457,12,0	0/1:5,6:11:1.73:599,0,2	0/0:9,0:9:12.03:0,12,541	0/0:12,0:12:33.11:0,33,2083	0/0:11,0:11:30.10:0,30,2007	0/0:25,0:25:66.23:0,66,4002	0/0:14,0:14:30.10:0,30,1995	0/0:21,0:20:48.15:0,48,2392	0/0:28,0:28:70.77:0,71,4208	0/0:25,0:25:57.20:0,57,3266	1/1:5,8:13:20.77:863,21,0	1/1:5,9:14:15.87:737,16,0	1/1:8,7:15:11.89:493,12,0	0/0:19,0:19:39.13:0,39,2347	0/0:18,0:18:51.17:0,51,2692	0/0:20,0:19:48.16:0,48,2870	0/0:11,0:11:27.09:0,27,1661
chr10	75307128	.	TAG	T	4877.93	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.820;DP=686;FS=14.359;HRun=0;HaplotypeScore=99.3783;InbreedingCoeff=0.9843;MQ=67.97;MQ0=2;MQRankSum=-1.835;QD=27.56;ReadPosRankSum=4.771;VQSLOD=5.7216;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,36:39:99:1238,99,0	0/0:9,0:9:18.06:0,18,297	0/0:21,0:21:45.83:0,46,692	0/0:30,0:30:62.99:0,63,867	0/0:19,0:19:51.17:0,51,841	0/0:18,0:18:36.12:0,36,593	0/0:31,0:31:46.75:0,47,1299	0/0:28,0:28:69.22:0,69,1084	1/1:4,21:25:54.17:675,54,0	0/0:20,0:20:51.17:0,51,840	0/0:17,1:18:7.62:0,8,653	1/1:1,17:18:39.06:488,39,0	1/1:3,24:27:60.19:751,60,0	0/0:21,0:21:57.17:0,57,902	0/0:24,0:24:69.24:0,69,1136	0/0:22,0:22:57.19:0,57,941	0/0:33,0:33:90.31:0,90,1477	0/0:23,0:23:60.20:0,60,985	0/0:18,0:18:33.11:0,33,545	0/0:18,0:18:48.16:0,48,792	0/0:57,3:59:75.43:0,75,2278	1/1:6,21:27:57.18:713,57,0	1/1:3,13:16:33.10:413,33,0	1/1:6,18:24:48.15:601,48,0	0/0:11,0:11:27.09:0,27,446	0/0:26,0:26:63.17:0,63,991	0/0:32,0:32:75.26:0,75,1238	0/0:26,1:27:43.76:0,44,1243
chr10	75307388	.	T	TG	3585.46	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.634;DP=594;FS=1.350;HRun=6;HaplotypeScore=65.7420;InbreedingCoeff=0.9823;MQ=85.50;MQ0=1;MQRankSum=-2.754;QD=28.46;ReadPosRankSum=3.310;VQSLOD=4.3839;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.18:0,84,855	0/0:7,0:7:21.05:0,21,214	0/0:27,0:27:62.95:0,63,579	0/0:20,0:19:28.28:0,28,265	0/0:15,0:15:45.10:0,45,457	0/0:24,0:24:60.13:0,60,612	0/0:32,0:32:75.16:0,75,765	0/0:30,0:30:72.14:0,72,725	1/1:3,20:23:54.17:679,54,0	0/0:17,0:17:45.10:0,45,459	0/0:13,0:13:33.06:0,33,329	1/1:2,34:36:93.30:1170,93,0	1/1:3,16:19:33.10:415,33,0	0/0:22,0:22:60.13:0,60,612	0/0:18,0:18:48.11:0,48,490	0/0:16,1:17:13.38:0,13,452	0/0:27,0:27:69.16:0,69,704	0/0:17,0:16:48.11:0,48,490	0/0:22,0:22:45.07:0,45,449	0/0:18,0:18:48.10:0,48,487	0/0:46,0:46:99:0,105,1057	1/1:1,13:14:36.12:453,36,0	1/1:1,8:9:9.03:113,9,0	1/1:5,20:25:60.19:755,60,0	0/0:11,0:11:33.07:0,33,336	0/0:23,0:23:57.12:0,57,580	0/0:16,0:16:48.10:0,48,483	0/0:14,0:14:39.09:0,39,398
chr10	75307514	.	T	TCA	3449.57	PASS	AB=0.581;AC=11;AF=0.196;AN=56;BaseQRankSum=-11.142;DP=554;FS=1.008;HRun=0;HaplotypeScore=70.0631;InbreedingCoeff=0.9271;MQ=80.11;MQ0=0;MQRankSum=-2.100;QD=32.54;ReadPosRankSum=4.474;VQSLOD=5.5448;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,111,1355	0/0:5,0:5:15.02:0,15,163	0/0:23,0:23:38.92:0,39,444	0/0:16,0:16:39.12:0,39,477	0/0:18,0:18:45.13:0,45,555	0/0:16,0:16:39.10:0,39,465	0/0:18,0:18:42.10:0,42,502	0/0:34,0:35:87.09:0,87,1044	1/1:3,14:18:18.17:531,18,0	0/0:17,0:17:36.11:0,36,444	0/0:20,0:20:48.13:0,48,579	1/1:3,16:19:42.14:698,42,0	1/1:1,12:13:30.10:498,30,0	0/0:11,0:11:30.10:0,30,378	0/0:22,0:22:54.16:0,54,668	0/0:13,0:13:33.11:0,33,416	0/0:22,0:22:60.19:0,60,755	0/0:18,0:18:45.12:0,45,552	0/0:19,0:19:42.10:0,42,503	0/0:18,0:18:54.15:0,54,655	0/0:27,0:27:54.15:0,54,665	1/1:4,10:14:30.10:498,30,0	0/1:5,13:18:1.18:465,0,1	1/1:5,18:24:13.34:760,13,0	0/0:21,0:21:57.17:0,57,705	0/0:24,0:24:66.21:0,66,823	0/0:19,0:19:54.16:0,54,668	0/0:21,0:21:60.19:0,60,757
chr10	75307962	.	CTT	C	1300.73	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.522;DP=596;FS=0.000;HRun=16;HaplotypeScore=81.2035;InbreedingCoeff=0.9463;MQ=72.90;MQ0=0;MQRankSum=0.394;QD=11.21;ReadPosRankSum=5.571;VQSLOD=2.5567;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:39:50.10:0,50,424	0/0:5,0:6:11.50:0,12,111	0/0:25,0:22:27.54:0,28,284	0/0:12,1:10:11.23:0,11,100	0/0:31,0:39:90.43:0,90,919	0/0:16,0:19:33.84:0,34,312	0/0:13,0:18:39.62:0,40,402	0/0:16,0:24:24.82:0,25,385	1/1:9,8:18:35.07:262,35,0	0/0:17,0:20:38.44:0,38,440	0/0:15,0:17:40.08:0,40,410	1/1:4,14:19:16.96:232,17,0	1/1:7,9:17:25.59:205,26,0	0/0:14,0:16:38.43:0,38,414	0/0:26,0:29:64.77:0,65,657	0/0:16,0:19:43.67:0,44,429	0/0:26,0:30:70.15:0,70,683	0/0:13,0:13:29.65:0,30,328	0/0:21,2:26:6.54:0,7,552	0/0:25,0:31:81.53:0,82,754	0/0:21,0:27:45:0,45,518	1/1:5,16:22:38.56:316,39,0	1/1:1,11:12:16.82:148,17,0	1/1:7,17:28:8.96:320,9,0	0/0:17,0:20:52.23:0,52,576	0/0:16,0:19:42.39:0,42,416	0/0:21,0:23:53.41:0,53,554	0/0:5,0:6:14.90:0,15,158
chr10	75309077	.	A	AGAATGAAT	10557.81	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-4.305;DP=827;FS=0.000;HRun=0;HaplotypeScore=190.2408;InbreedingCoeff=0.9775;MQ=64.04;MQ0=1;MQRankSum=-12.844;QD=56.76;ReadPosRankSum=-3.237;VQSLOD=4.0406;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,102,2344	0/0:11,0:11:30.10:0,30,705	0/0:23,0:22:29.93:0,30,524	0/0:22,0:20:33.05:0,33,645	0/0:29,0:29:78.23:0,78,1804	0/0:26,0:26:66.23:0,66,1637	0/0:20,0:20:42.95:0,43,1028	0/0:37,0:37:72.22:0,72,1529	1/1:4,23:27:36.12:1513,36,0	0/0:38,0:38:96.29:0,96,2132	0/0:34,0:34:63.20:0,63,1472	1/1:6,27:36:45.15:1870,45,0	1/1:11,26:39:69.24:2812,69,0	0/0:30,0:30:63.22:0,63,1592	0/0:41,0:41:99:0,114,2693	0/0:27,0:27:75.22:0,75,1746	0/0:19,0:19:51.17:0,51,1213	0/0:19,0:19:42.10:0,42,955	0/0:19,0:19:30.10:0,30,700	0/0:43,0:43:99:0,114,2801	0/0:38,0:38:96.30:0,96,2261	1/1:7,31:41:84.19:2746,84,0	1/1:4,15:20:27.09:924,27,0	1/1:8,12:23:20.94:693,21,0	0/0:44,0:44:99:0,117,2792	0/0:34,0:34:78.26:0,78,1890	0/0:35,0:35:78.25:0,78,1823	0/0:9,0:9:6:0,6,72
chr10	75309578	.	T	TTG	989.64	PASS	AB=0.839;AC=9;AF=0.167;AN=54;BaseQRankSum=-3.534;DP=592;FS=1.459;HRun=0;HaplotypeScore=86.8823;InbreedingCoeff=0.0991;MQ=62.12;MQ0=5;MQRankSum=0.677;QD=6.30;ReadPosRankSum=-0.798;VQSLOD=3.0193;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:43:7.24:0,7,31	0/0:3,0:3:6.02:0,6,67	./.	0/1:16,0:12:0:0,0,0	0/0:13,0:13:20.89:0,21,213	0/1:18,1:21:7.32:7,0,254	0/0:23,0:25:42.25:0,42,450	0/0:33,0:33:17.87:0,18,173	0/1:16,7:23:15.32:208,0,15	0/0:22,0:25:26.79:0,27,256	0/0:16,0:18:35.69:0,36,343	0/0:24,0:24:34.14:0,34,337	0/1:13,4:18:23.45:237,0,23	0/0:24,0:24:32.74:0,33,316	0/0:25,0:24:23.89:0,24,248	0/0:19,0:19:32.87:0,33,338	0/0:30,0:34:32.85:0,33,504	0/0:22,0:22:27.07:0,27,300	0/0:12,0:15:14.50:0,15,109	0/0:13,0:13:20.72:0,21,203	0/0:28,1:28:2.26:0,2,387	0/1:3,8:11:15.21:186,0,15	1/1:7,4:12:9.03:136,9,0	0/1:19,6:28:24:304,0,24	0/0:17,0:22:35.76:0,36,362	0/1:26,0:28:42.32:42,0,353	0/0:15,0:15:18.04:0,18,188	0/0:15,0:18:6.37:0,6,298
chr10	75309824	.	TTCATTCATTC	T	333.66	PASS	AB=0.750;AC=7;AF=0.135;AN=52;BaseQRankSum=5.380;DP=379;FS=1.218;HRun=0;HaplotypeScore=116.0776;InbreedingCoeff=0.7248;MQ=56.45;MQ0=3;MQRankSum=-4.875;QD=30.33;ReadPosRankSum=-0.227;VQSLOD=3.1518;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:60.18:0,60,1173	0/0:9,0:9:27.08:0,27,1225	./.	0/0:5,0:3:9.02:0,9,177	0/0:18,0:18:54.17:0,54,2351	0/0:15,0:15:45.15:0,45,2127	0/0:4,0:4:12.04:0,12,504	0/0:51,0:51:99:0,149,5166	1/1:1,2:3:9.03:176,9,0	0/0:14,0:14:42.14:0,42,1659	0/0:19,0:19:57.20:0,57,2451	0/1:2,1:3:5.13:77,0,5	1/1:2,1:3:8.99:127,9,0	0/0:7,0:7:21.07:0,21,1020	0/0:6,0:6:18.06:0,18,759	0/0:8,0:8:24.08:0,24,927	0/0:16,0:16:42.14:0,42,1905	0/0:37,0:37:99:0,111,5133	0/0:24,0:24:72.25:0,72,2675	0/0:17,0:17:51.18:0,51,2390	0/0:5,0:5:15.05:0,15,674	0/0:1,0:1:2.84:0,3,14	1/1:1,1:2:6.02:83,6,0	./.	0/0:27,0:26:78.27:0,78,3814	0/0:22,0:22:66.18:0,66,2802	0/0:15,0:15:30.10:0,30,1207	0/0:10,0:10:30.09:0,30,1230
chr10	75310928	.	TAATG	T	513.19	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=5.680;DP=581;FS=21.572;HRun=0;HaplotypeScore=78.6634;InbreedingCoeff=0.8533;MQ=59.88;MQ0=29;MQRankSum=-5.667;QD=6.26;ReadPosRankSum=-2.874;VQSLOD=-0.2595;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:6:6.02:110,6,0	0/0:12,0:12:36.11:0,36,869	0/0:21,0:16:45.15:0,45,1160	0/0:24,0:22:66.19:0,66,1666	0/0:28,0:28:81.28:0,81,2107	0/0:19,0:19:54.19:0,54,1388	0/0:15,0:15:39.13:0,39,1030	0/0:27,0:27:66.23:0,66,1730	1/1:1,14:5:3.01:55,3,0	0/0:25,1:25:66.23:0,66,1744	0/0:13,0:13:39.13:0,39,1030	1/1:2,21:8:18.06:325,18,0	1/1:3,13:7:3.01:55,3,0	0/0:20,0:20:60.21:0,60,1547	0/0:19,0:19:48.16:0,48,1237	0/0:20,0:20:60.21:0,60,1585	0/0:30,1:31:78.27:0,78,2042	0/0:34,0:33:90.31:0,90,2323	0/0:26,0:25:75.25:0,75,1900	0/0:31,0:31:90.31:0,90,2371	0/0:26,0:26:75.24:0,75,1920	1/1:2,11:9:6.02:110,6,0	./.	./.	0/0:14,0:13:39.13:0,39,1028	0/0:28,0:28:78.27:0,78,2006	0/0:33,0:32:99:0,99,2525	0/0:12,0:12:30.10:0,30,774
chr10	75312997	.	C	CATAGATGT	7052.20	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-6.291;DP=480;FS=25.364;HRun=0;HaplotypeScore=122.6684;InbreedingCoeff=0.9886;MQ=91.79;MQ0=0;MQRankSum=-11.362;QD=81.06;ReadPosRankSum=2.770;VQSLOD=3.0684;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:66.17:0,66,1658	0/0:7,0:7:15.04:0,15,353	0/0:24,0:24:60.19:0,60,1483	0/0:25,0:26:54.07:0,54,1274	0/0:20,0:20:54.17:0,54,1399	0/0:23,0:23:60.19:0,60,1447	0/0:13,0:13:33.06:0,33,771	0/0:27,0:27:60.20:0,60,1559	1/1:0,15:15:36.12:1547,36,0	0/0:18,0:18:39.13:0,39,1004	0/0:14,0:14:42.14:0,42,1097	1/1:2,12:14:30.10:1288,30,0	1/1:6,11:17:24.08:1030,24,0	0/0:15,0:15:36.12:0,36,947	0/0:14,0:14:30.09:0,30,757	0/0:11,0:11:27.09:0,27,720	0/0:15,0:15:30.03:0,30,750	0/0:10,0:10:27.05:0,27,665	0/0:15,0:15:33.11:0,33,883	0/0:19,0:19:48.16:0,48,1233	0/0:15,0:15:36.11:0,36,904	1/1:5,10:15:33.11:1391,33,0	1/1:5,8:13:30.01:1286,30,0	1/1:7,6:12:12.04:510,12,0	0/0:11,0:11:27.09:0,27,732	0/0:31,0:31:90.29:0,90,2269	0/0:26,0:26:75.26:0,75,2034	0/0:10,0:10:27.08:0,27,675
chr10	75313255	.	A	ATCTC	1031.10	PASS	AB=0.582;AC=12;AF=0.214;AN=56;BaseQRankSum=3.603;DP=571;FS=0.000;HRun=0;HaplotypeScore=121.0372;InbreedingCoeff=0.8024;MQ=67.80;MQ0=26;MQRankSum=-1.065;QD=8.32;ReadPosRankSum=1.241;VQSLOD=2.5875;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:31:40.41:584,40,0	0/0:9,0:9:27.09:0,27,419	0/0:67,0:34:38.50:0,38,639	0/0:50,0:26:23.76:0,24,658	0/0:19,0:19:27.07:0,27,376	0/0:20,0:20:38.67:0,39,613	0/0:21,0:21:48.16:0,48,760	0/0:26,0:25:36.10:0,36,544	0/1:2,0:13:0.01:0,0,0	0/0:13,0:13:18.62:0,19,333	0/0:8,0:8:21.07:0,21,323	1/1:18,0:20:21.10:347,21,0	1/1:6,1:12:3.48:75,3,0	0/0:16,0:16:44.82:0,45,662	0/0:16,0:16:30.10:0,30,472	0/0:16,0:16:17.68:0,18,282	0/0:29,0:30:57.37:0,57,797	0/0:12,0:12:24.08:0,24,362	0/0:14,0:14:14.34:0,14,244	0/0:15,0:15:23.18:0,23,325	0/0:42,0:42:74.80:0,75,1097	1/1:4,9:14:3.48:75,3,0	1/1:10,0:10:6.02:100,6,0	0/1:9,14:21:0:0,0,0	0/0:10,0:10:26.70:0,27,416	0/0:21,0:21:48.12:0,48,762	0/0:15,0:15:32.79:0,33,492	0/0:7,0:7:6.02:0,6,88
chr10	75313270	.	TCA	T	162.71	PASS	AB=0.970;AC=15;AF=0.288;AN=52;BaseQRankSum=1.024;DP=662;FS=18.526;HRun=0;HaplotypeScore=103.2481;InbreedingCoeff=-0.2788;MQ=55.35;MQ0=28;MQRankSum=0.460;QD=0.56;ReadPosRankSum=-0.838;VQSLOD=0.2925;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:34:9.06:46,9,0	0/1:10,0:10:0.01:0,0,74	./.	./.	0/1:15,2:16:23.31:23,0,57	0/0:19,0:19:18.03:0,18,217	0/1:25,0:25:9.70:10,0,80	0/0:18,0:16:5.96:0,6,44	0/0:22,0:22:7.98:0,8,110	0/0:19,0:18:3.70:0,4,145	0/1:11,0:11:4.92:5,0,59	0/0:35,0:35:18.75:0,19,134	0/1:17,0:17:8.54:9,0,29	0/1:22,1:23:14.61:15,0,268	0/1:21,0:21:32.62:33,0,225	0/0:12,0:12:8.92:0,9,84	0/1:28,8:36:23.74:24,0,172	0/1:13,1:14:29.40:29,0,73	0/1:15,0:15:13.01:15,0,13	0/1:18,0:18:28.27:28,0,35	0/0:49,0:48:6.16:0,6,241	0/0:19,0:18:8.92:0,9,64	0/0:17,0:18:2.98:0,3,21	0/0:38,0:35:3:0,3,25	0/1:21,0:21:21.27:21,0,215	0/1:29,0:29:46.73:47,0,265	0/0:22,0:22:3.05:0,3,190	0/0:4,0:4:9:0,9,103
chr10	75315441	.	GA	G	585.13	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=5.950;DP=570;FS=2.396;HRun=10;HaplotypeScore=53.5107;InbreedingCoeff=0.6213;MQ=62.24;MQ0=9;MQRankSum=0.339;QD=11.04;ReadPosRankSum=0.293;VQSLOD=2.6073;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,33:40:77.98:677,78,0	0/0:13,0:14:41.94:0,42,439	0/0:14,0:7:8.97:0,9,85	0/1:13,0:4:11.44:11,0,50	0/0:26,0:26:66.17:0,66,724	0/0:20,0:20:57.14:0,57,623	0/0:18,0:19:50.59:0,51,502	0/0:25,0:26:55.90:0,56,595	0/0:13,0:13:36.09:0,36,390	0/0:21,0:20:54.15:0,54,597	0/0:33,0:33:90.24:0,90,995	0/0:6,0:7:20.88:0,21,205	0/0:10,0:10:24.06:0,24,265	0/0:8,0:8:24.06:0,24,266	0/0:17,0:17:45.12:0,45,498	0/0:14,1:15:13.05:0,13,372	0/0:29,0:29:78.04:0,78,824	0/0:14,0:13:36.10:0,36,398	0/0:19,0:18:36.10:0,36,398	0/0:33,1:34:67.17:0,67,952	0/0:14,0:14:36.10:0,36,398	0/0:21,0:21:54.14:0,54,595	0/0:18,0:18:39.10:0,39,424	0/0:14,0:14:27.07:0,27,299	0/0:22,1:22:28.09:0,28,538	0/0:25,1:26:43.13:0,43,704	0/0:29,0:29:78.20:0,78,854	0/0:32,0:32:69.14:0,69,735
chr10	75317982	.	TG	T	1606.99	PASS	AB=0.868;AC=29;AF=0.518;AN=56;BaseQRankSum=3.414;DP=441;FS=3.977;HRun=12;HaplotypeScore=57.7606;InbreedingCoeff=-0.0559;MQ=72.16;MQ0=0;MQRankSum=-1.381;QD=4.63;ReadPosRankSum=5.573;VQSLOD=0.7298;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:18:20.36:59,20,0	0/1:6,0:6:11.57:12,0,52	0/0:17,0:16:4.75:0,5,147	0/1:16,0:17:12.79:13,0,134	0/1:13,3:16:28.56:29,0,80	0/0:12,0:12:18.01:0,18,165	0/0:12,2:14:0.82:0,1,190	0/1:9,2:11:39.99:40,0,74	1/1:7,13:22:33.95:244,34,0	1/1:10,1:12:6.97:35,7,0	0/1:13,2:15:7.20:7,0,102	1/1:5,15:20:35.84:276,36,0	1/1:5,3:10:10.02:58,10,0	0/1:12,4:16:45.67:46,0,120	0/1:10,1:12:15.08:15,0,72	0/0:18,0:18:2.97:0,3,168	0/1:25,6:31:88.38:88,0,258	0/1:20,5:25:16.42:16,0,214	0/0:13,1:14:1.83:0,2,168	0/0:5,0:5:3.01:0,3,30	0/1:16,3:19:15.57:73,0,16	1/1:7,4:11:11.95:93,12,0	1/1:4,13:18:40.89:308,41,0	1/1:4,16:24:41.96:296,42,0	0/0:14,0:14:17.82:0,18,150	0/1:15,5:20:26.40:26,0,69	0/1:13,2:15:34.48:34,0,39	0/1:7,1:8:11.21:11,0,79
chr10	75318253	.	T	TA	2538.48	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-8.015;DP=412;FS=13.440;HRun=5;HaplotypeScore=41.1594;InbreedingCoeff=0.9633;MQ=66.56;MQ0=2;MQRankSum=-0.107;QD=28.85;ReadPosRankSum=-0.820;VQSLOD=2.1835;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.21:0,84,902	0/0:3,0:3:9.02:0,9,97	0/0:13,0:9:11.77:0,12,192	0/0:16,0:8:12.75:0,13,154	0/0:9,0:9:27.05:0,27,281	0/0:15,0:15:42.11:0,42,451	0/0:12,0:12:30.07:0,30,322	0/0:22,0:22:54.12:0,54,573	1/1:1,7:8:12.04:158,12,0	0/0:11,0:11:30.07:0,30,321	0/0:11,0:11:32.79:0,33,319	1/1:2,20:22:51.17:671,51,0	1/1:0,14:14:30.09:395,30,0	0/0:9,0:9:24.06:0,24,258	0/0:9,0:9:24.03:0,24,241	0/0:17,0:17:48.12:0,48,516	0/0:33,0:33:72.31:0,72,954	0/0:20,0:20:51.09:0,51,536	0/0:16,0:16:33.08:0,33,354	0/0:7,0:7:18.04:0,18,191	0/0:29,0:29:78.19:0,78,838	1/1:1,7:8:18.06:237,18,0	1/1:0,11:11:30.10:395,30,0	1/1:2,23:25:66.21:868,66,0	0/0:10,0:10:18.04:0,18,193	0/0:13,0:13:39.09:0,39,412	0/0:8,0:8:24.04:0,24,249	0/0:10,0:10:27.07:0,27,290
chr10	75318345	.	AAAAT	A	334.52	PASS	AB=0.914;AC=4;AF=0.080;AN=50;BaseQRankSum=4.188;DP=273;FS=4.948;HRun=0;HaplotypeScore=40.5352;InbreedingCoeff=0.2507;MQ=53.01;MQ0=11;MQRankSum=2.671;QD=8.36;ReadPosRankSum=-0.327;VQSLOD=1.4559;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,13:18:24.08:371,24,0	0/0:6,0:6:9.03:0,9,202	./.	./.	0/0:5,0:5:6.02:0,6,140	0/0:8,0:8:21.07:0,21,491	0/0:6,0:6:9.03:0,9,211	0/0:30,0:25:18.06:0,18,332	0/0:11,0:11:3.01:0,3,37	0/0:13,0:13:21.07:0,21,492	0/0:8,0:8:3.01:0,3,70	0/0:9,0:9:3.01:0,3,36	0/0:9,0:9:12.04:0,12,172	0/1:8,1:9:37.39:37,0,132	0/0:7,0:7:9.03:0,9,211	0/0:7,0:7:3.01:0,3,70	0/0:21,0:21:45.15:0,45,1051	0/0:15,0:15:15.05:0,15,332	0/1:12,1:11:34.39:34,0,154	0/0:3,0:3:3.01:0,3,70	0/0:7,0:7:9.03:0,9,211	./.	0/0:7,0:7:0:0,0,0	0/0:2,0:2:0.47:0,0,1	0/0:14,0:14:21.07:0,21,493	0/0:8,0:8:9.03:0,9,188	0/0:8,0:8:18.06:0,18,422	0/0:6,0:6:15.05:0,15,352
chr10	75319293	.	CGGGGGT	C	2560.02	PASS	AB=0.917;AC=12;AF=0.286;AN=42;BaseQRankSum=6.091;DP=135;FS=80.282;HRun=0;HaplotypeScore=52.1708;InbreedingCoeff=0.5597;MQ=74.81;MQ0=0;MQRankSum=-6.740;QD=31.61;ReadPosRankSum=5.589;VQSLOD=0.3469;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:1,0:1:0:0,0,0	./.	0/0:3,0:2:5.97:0,6,79	0/0:7,0:6:9.33:0,9,196	0/0:2,0:2:3:0,3,25	0/0:3,0:3:6.02:0,6,74	./.	0/0:4,0:4:6.90:0,7,85	1/1:3,17:21:33.11:662,33,0	0/0:2,0:2:6.02:0,6,90	0/0:2,0:2:3.01:0,3,52	1/1:2,12:14:33.11:738,33,0	1/1:5,12:17:20.26:644,20,0	0/0:3,0:3:9.02:0,9,147	./.	0/1:4,1:5:53.19:53,0,124	0/0:5,0:5:9.02:0,9,105	0/0:3,0:3:6.02:0,6,87	./.	./.	0/0:9,0:9:24.08:0,24,353	1/1:4,4:8:15.01:281,15,0	./.	1/1:7,7:15:21.05:328,21,0	0/0:2,0:2:3.01:0,3,52	0/0:3,0:3:6.01:0,6,82	0/0:1,0:1:3.01:0,3,37	./.
chr10	75319548	.	C	CTGTATGTA	1484.72	PASS	AB=0.938;AC=11;AF=0.220;AN=50;BaseQRankSum=3.087;DP=698;FS=6.744;HRun=0;HaplotypeScore=191.5566;InbreedingCoeff=0.7952;MQ=69.87;MQ0=4;MQRankSum=-2.705;QD=9.40;ReadPosRankSum=-1.058;VQSLOD=2.0622;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:35:41.25:0,41,799	0/0:10,0:10:9.02:0,9,174	./.	./.	0/0:27,0:27:42.13:0,42,993	0/0:11,0:11:18.05:0,18,397	0/0:24,0:24:29.54:0,30,661	0/0:39,0:39:24.02:0,24,260	1/1:23,1:33:14.08:423,14,0	0/0:22,0:24:39.13:0,39,893	0/0:22,0:22:24.03:0,24,389	1/1:10,8:19:15.05:588,15,0	1/1:12,4:18:9.01:267,9,0	0/0:25,0:25:33.11:0,33,819	0/0:32,0:32:57.18:0,57,1361	0/0:25,0:25:45.14:0,45,1013	0/0:36,0:36:54.18:0,54,1275	0/0:24,0:25:27.08:0,27,639	0/0:24,0:23:15.05:0,15,343	0/0:20,0:20:39.12:0,39,867	0/0:33,0:34:23.70:0,24,991	1/1:13,0:26:26.94:220,27,0	1/1:22,9:31:2.92:122,3,0	./.	0/0:17,0:17:36.12:0,36,891	0/1:28,0:30:24.77:25,0,393	0/0:22,0:23:36.11:0,36,824	0/0:12,0:12:15.05:0,15,372
chr10	75320396	.	C	CA	3137.92	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.651;DP=585;FS=1.858;HRun=8;HaplotypeScore=59.9153;InbreedingCoeff=0.9905;MQ=69.71;MQ0=0;MQRankSum=-0.024;QD=25.10;ReadPosRankSum=2.055;VQSLOD=4.5661;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,950	0/0:12,0:12:33.02:0,33,302	0/0:16,0:15:29.61:0,30,249	0/0:18,0:18:28.05:0,28,222	0/0:30,0:30:75:0,75,677	0/0:20,0:20:53.97:0,54,482	0/0:20,0:20:56.06:0,56,500	0/0:29,1:30:40.40:0,40,614	1/1:2,18:20:54.16:623,54,0	0/0:22,0:22:54.01:0,54,494	0/0:16,0:16:31.81:0,32,275	1/1:2,19:21:51.15:589,51,0	1/1:5,15:20:42.12:484,42,0	0/0:20,1:21:19.39:0,19,426	0/0:15,0:15:41.95:0,42,367	0/0:13,0:13:32.94:0,33,288	0/0:34,0:34:96.03:0,96,873	0/0:30,0:31:89.07:0,89,798	0/0:18,0:18:47.06:0,47,418	0/0:20,0:20:54.02:0,54,490	0/0:13,0:13:35.99:0,36,324	1/1:3,20:23:57.17:658,57,0	1/1:7,17:24:40.36:453,40,0	1/1:0,17:17:45.13:519,45,0	0/0:14,0:14:39.02:0,39,357	0/0:34,0:34:92.87:0,93,830	0/0:19,0:19:45.01:0,45,412	0/0:6,0:7:11.02:0,11,88
chr10	75321045	.	A	AGAT	48.22	PASS	AB=1.000;AC=4;AF=0.077;AN=52;BaseQRankSum=2.405;DP=675;FS=5.828;HRun=0;HaplotypeScore=109.6303;InbreedingCoeff=0.3490;MQ=65.18;MQ0=3;MQRankSum=-1.534;QD=0.60;ReadPosRankSum=-0.742;VQSLOD=1.7668;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,16:43:6.76:126,7,0	0/0:12,0:12:15:0,15,152	./.	./.	0/0:32,0:32:57.09:0,57,642	0/0:27,0:27:50.98:0,51,506	0/0:33,0:33:25.43:0,25,311	0/0:32,0:32:5.92:0,6,40	0/0:29,0:29:39:0,39,343	0/0:30,0:30:38.65:0,39,421	0/0:25,0:25:39.04:0,39,412	0/0:16,0:16:16.83:0,17,141	0/0:15,0:15:8.67:0,9,68	0/0:22,0:22:39.09:0,39,466	0/0:25,0:25:30.04:0,30,334	0/0:12,0:12:27.05:0,27,310	0/0:29,0:29:60.06:0,60,684	0/0:20,0:20:39.06:0,39,436	0/0:15,0:17:3:0,3,26	0/0:23,0:23:26.97:0,27,296	0/0:44,0:45:71.98:0,72,736	0/0:10,0:10:12:0,12,106	0/0:17,0:17:20.99:0,21,182	0/1:21,0:21:0.80:1,0,164	0/0:24,0:24:33.04:0,33,349	0/0:17,0:17:18.01:0,18,172	0/0:27,0:27:45.10:0,45,532	0/1:16,0:16:13.44:13,0,216
chr10	75321089	.	ATGG	A	1180.11	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.037;DP=711;FS=7.426;HRun=0;HaplotypeScore=97.6159;InbreedingCoeff=0.9696;MQ=57.07;MQ0=19;MQRankSum=3.084;QD=8.94;ReadPosRankSum=3.367;VQSLOD=2.3321;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:40:35.28:0,35,433	0/0:11,0:11:27:0,27,335	0/0:19,0:14:41.74:0,42,379	0/0:16,0:8:11.06:0,11,134	0/0:38,0:37:76.56:0,77,1148	0/0:31,0:30:63.01:0,63,841	0/0:27,0:27:60.84:0,61,542	0/0:25,0:20:44.83:0,45,373	1/1:6,24:30:27.09:397,27,0	0/0:35,0:33:74.84:0,75,935	0/0:34,0:34:61.01:0,61,841	1/1:1,19:20:15.05:220,15,0	1/1:2,20:22:14.87:165,15,0	0/0:20,0:20:54.09:0,54,861	0/0:24,0:24:60.01:0,60,718	0/0:23,0:23:38.13:0,38,782	0/0:31,0:31:74.59:0,75,1078	0/0:29,0:29:41.21:0,41,688	0/0:10,0:7:17.66:0,18,119	0/0:26,0:26:63.32:0,63,712	0/0:49,0:45:78.01:0,78,1137	1/1:2,14:16:15.01:183,15,0	1/1:2,18:20:15.05:220,15,0	1/1:5,19:24:12.04:177,12,0	0/0:20,0:19:42.07:0,42,649	0/0:20,0:20:51.01:0,51,561	0/0:34,0:34:71.21:0,71,1161	0/0:15,0:15:20.13:0,20,580
chr10	75322939	.	CTTCTTTT	C	3224.61	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.734;DP=541;FS=27.445;HRun=0;HaplotypeScore=125.4931;InbreedingCoeff=0.9501;MQ=68.76;MQ0=0;MQRankSum=-10.433;QD=34.30;ReadPosRankSum=1.607;VQSLOD=1.7831;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:51.15:0,51,1648	0/0:5,0:5:15.05:0,15,550	0/0:29,0:22:24.51:0,25,339	0/0:15,0:8:9.01:0,9,256	0/0:21,0:21:47.94:0,48,1273	0/0:19,0:19:45.14:0,45,1625	0/0:21,0:21:48.16:0,48,1638	0/0:26,0:26:48.10:0,48,1287	1/1:5,15:20:33.11:771,33,0	0/0:24,0:24:54.16:0,54,1614	0/0:21,0:21:45.15:0,45,1504	1/1:3,12:15:30.10:680,30,0	1/1:4,12:16:36.12:828,36,0	0/0:16,0:16:39.13:0,39,1395	0/0:25,0:25:51.16:0,51,1707	0/0:16,0:16:42.14:0,42,1482	0/0:34,0:34:81.27:0,81,2792	0/0:24,0:24:57.09:0,57,1548	0/0:29,0:29:66.09:0,66,1621	0/0:16,0:16:27.06:0,27,833	0/0:13,0:13:27.05:0,27,662	1/1:11,6:17:35.95:599,36,0	1/1:2,10:12:20.98:389,21,0	1/1:5,9:13:6.02:140,6,0	0/0:10,0:10:30.10:0,30,992	0/0:23,0:23:51.16:0,51,1635	0/0:30,0:30:69.22:0,69,2319	0/0:6,0:6:9.02:0,9,330
chr10	75323859	.	T	TA	279.71	PASS	AB=0.944;AC=4;AF=0.071;AN=56;BaseQRankSum=-0.380;DP=431;FS=1.950;HRun=13;HaplotypeScore=50.8982;InbreedingCoeff=0.4843;MQ=53.11;MQ0=19;MQRankSum=-1.824;QD=4.91;ReadPosRankSum=-0.605;VQSLOD=1.2375;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,29:38:15.51:367,16,0	0/1:2,0:2:0:0,0,0	0/0:25,0:9:13.54:0,14,82	0/0:13,0:6:3.43:0,3,21	0/0:18,1:18:29.65:0,30,205	0/1:13,2:15:5.21:5,0,139	0/0:13,0:12:32.71:0,33,224	0/0:24,0:23:28.68:0,29,189	0/0:11,0:9:19.88:0,20,129	0/0:18,0:16:29.67:0,30,204	0/0:16,0:17:22.70:0,23,148	0/0:11,0:11:26.65:0,27,177	0/0:11,0:12:19.78:0,20,129	0/0:11,0:10:19.86:0,20,141	0/0:15,0:13:26.72:0,27,185	0/0:8,0:8:22.87:0,23,150	0/0:26,0:26:55.28:0,55,364	0/0:27,1:30:47.67:0,48,457	0/0:10,0:8:17.72:0,18,117	0/0:10,0:10:20.81:0,21,143	0/0:18,0:18:25.34:0,25,211	0/0:2,0:3:4.53:0,5,25	0/0:5,0:5:5.86:0,6,41	0/0:7,0:8:13.89:0,14,88	0/0:8,0:9:19.88:0,20,129	0/0:20,1:21:6.18:0,6,169	0/0:23,0:21:32.74:0,33,226	0/0:8,0:8:11.90:0,12,82
chr10	75324308	.	T	TTCCC	1542.37	PASS	AB=0.923;AC=11;AF=0.196;AN=56;BaseQRankSum=4.595;DP=587;FS=16.570;HRun=0;HaplotypeScore=102.0499;InbreedingCoeff=0.7429;MQ=56.35;MQ0=24;MQRankSum=-5.685;QD=24.48;ReadPosRankSum=0.204;VQSLOD=2.3421;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.27:0,84,1419	0/0:1,0:1:3.01:0,3,50	0/0:78,0:13:21.59:0,22,226	0/0:63,0:12:20.37:0,20,231	0/0:20,0:20:54.18:0,54,924	0/0:17,0:16:45.14:0,45,749	0/0:12,0:12:33.11:0,33,569	0/0:23,0:23:63.18:0,63,1082	1/1:12,0:12:12.24:245,12,0	0/0:19,0:19:54.64:0,55,906	0/0:19,0:19:51.17:0,51,893	0/1:11,1:11:17.31:301,0,17	1/1:7,0:6:3.27:102,3,0	0/0:13,0:13:36.11:0,36,591	0/0:21,0:21:54.16:0,54,879	0/0:15,0:14:36.12:0,36,641	0/0:35,0:34:99:0,99,1674	0/0:24,0:23:63.17:0,63,1034	0/0:21,0:20:57.14:0,57,845	0/0:15,0:15:43.03:0,43,755	0/0:4,0:4:9.03:0,9,157	1/1:7,2:9:9.16:363,9,0	1/1:9,2:11:24.08:523,24,0	1/1:9,3:12:3.83:166,4,0	0/0:17,0:16:48.15:0,48,824	0/0:31,0:31:84.29:0,84,1457	0/0:26,0:25:75.22:0,75,1188	0/0:19,0:19:54.19:0,54,981
chr10	75324321	.	TTCCTTTC	T	1594.88	PASS	AB=0.950;AC=12;AF=0.222;AN=54;BaseQRankSum=9.272;DP=629;FS=6.315;HRun=0;HaplotypeScore=125.6948;InbreedingCoeff=0.7784;MQ=51.76;MQ0=29;MQRankSum=-8.533;QD=10.78;ReadPosRankSum=-2.890;VQSLOD=0.9008;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.23:0,84,2413	./.	0/0:91,0:9:9.56:0,10,175	0/1:77,0:13:12.41:12,0,312	0/0:22,0:22:57.04:0,57,1537	0/0:14,0:13:36.12:0,36,1213	0/0:17,0:16:48.16:0,48,1429	0/0:23,0:23:56.80:0,57,1451	1/1:4,10:14:18.06:362,18,0	0/0:20,0:20:53.70:0,54,1361	0/0:19,0:19:51.18:0,51,1630	1/1:10,0:9:17.95:249,18,0	1/1:10,1:10:16.16:357,16,0	0/0:13,0:13:36.04:0,36,1080	0/0:18,0:18:48.15:0,48,1314	0/0:15,0:14:41.63:0,42,1255	0/0:40,0:39:99:0,114,3064	0/0:22,0:21:57.02:0,57,1473	0/0:18,0:17:48.10:0,48,1125	0/0:17,0:17:41.79:0,42,1133	0/0:3,0:3:9.03:0,9,311	0/1:8,1:9:4.98:316,0,5	1/1:4,9:13:15.45:213,15,0	1/1:8,6:14:9.73:259,10,0	0/0:20,0:19:54.05:0,54,1552	0/0:30,0:30:87.24:0,87,2363	0/0:27,0:25:72.06:0,72,2093	0/0:22,0:22:60.12:0,60,1590
chr10	75324322	.	TCCTTTC	T	1400.13	PASS	AB=0.864;AC=12;AF=0.222;AN=54;BaseQRankSum=9.288;DP=620;FS=4.185;HRun=0;HaplotypeScore=114.9069;InbreedingCoeff=0.7365;MQ=51.75;MQ0=28;MQRankSum=-7.993;QD=9.79;ReadPosRankSum=-2.533;VQSLOD=2.0800;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.23:0,84,2237	./.	0/0:87,0:8:9.34:0,9,169	0/1:76,0:13:11.13:11,0,299	0/0:22,0:22:57.05:0,57,1392	0/0:14,0:13:36.12:0,36,1099	0/0:17,0:16:48.16:0,48,1325	0/0:22,0:22:56.80:0,57,1351	1/1:11,2:14:18.06:350,18,0	0/0:18,0:19:53.61:0,54,1245	0/0:19,0:19:51.17:0,51,1481	1/1:2,4:9:17.95:247,18,0	1/1:6,3:10:21.88:336,22,0	0/0:14,0:14:34.24:0,34,1003	0/0:18,0:18:48.15:0,48,1210	0/0:15,0:14:41.63:0,42,1145	0/0:40,0:39:99:0,114,2827	0/0:22,0:21:55.07:0,55,1348	0/0:18,0:17:48.05:0,48,1063	0/0:15,0:15:42.04:0,42,1060	0/0:3,0:3:9.03:0,9,287	0/1:5,1:8:12.21:250,0,12	1/1:10,0:10:9.03:162,9,0	1/1:10,2:13:5.99:215,6,0	0/0:20,0:19:54.05:0,54,1431	0/0:30,0:30:87.27:0,87,2186	0/0:28,0:26:75.22:0,75,1949	0/0:22,0:22:60.12:0,60,1497
chr10	75324778	.	GGT	G	683.35	PASS	AB=0.915;AC=23;AF=0.442;AN=52;BaseQRankSum=7.646;DP=416;FS=22.535;HRun=0;HaplotypeScore=58.1124;InbreedingCoeff=-0.1925;MQ=53.73;MQ0=16;MQRankSum=0.663;QD=2.54;ReadPosRankSum=-1.103;VQSLOD=-0.0923;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:6:12.04:0,12,171	0/0:19,0:5:3:0,3,28	./.	0/1:18,3:21:57.85:58,0,484	0/1:16,2:18:37.04:37,0,443	0/1:8,0:8:16.31:16,0,190	0/1:29,2:29:72.68:73,0,286	1/1:4,0:4:5.95:41,6,0	0/0:17,1:17:26.29:0,26,359	0/1:16,0:16:25.58:26,0,491	1/1:8,0:8:11.34:64,11,0	1/1:11,0:11:23.25:155,23,0	0/1:14,1:14:10.24:10,0,296	0/0:11,0:11:24.08:0,24,366	0/1:6,2:10:61.78:62,0,144	0/1:17,5:22:4.30:4,0,338	0/1:18,3:21:48.85:49,0,621	0/1:10,1:11:22.61:23,0,88	0/0:14,0:11:30.07:0,30,420	0/1:13,2:14:44.59:45,0,254	0/1:6,0:6:32.09:32,0,36	1/1:9,0:9:2.82:22,3,0	0/1:12,0:12:3.34:99,0,3	0/1:13,1:14:13.29:13,0,235	0/0:27,0:27:48.21:0,48,836	0/0:16,0:16:36.11:0,36,524	0/1:12,2:13:16.29:16,0,191
chr10	75324805	.	GTGTC	G	187.20	PASS	AB=0.938;AC=8;AF=0.143;AN=56;BaseQRankSum=4.946;DP=472;FS=5.028;HRun=0;HaplotypeScore=75.7057;InbreedingCoeff=0.6074;MQ=54.02;MQ0=32;MQRankSum=-2.191;QD=2.28;ReadPosRankSum=-1.306;VQSLOD=1.2110;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:0.78:0,1,2	0/0:6,0:6:14.46:0,14,286	0/0:33,0:6:5.05:0,5,53	0/1:38,0:9:6.09:6,0,97	0/0:19,0:19:51.08:0,51,1019	0/0:21,0:21:59.99:0,60,1048	0/0:12,0:12:30.05:0,30,541	0/0:29,0:25:31.43:0,31,627	0/0:7,0:7:0:0,0,0	0/0:14,0:13:30.79:0,31,686	0/0:18,0:18:30.68:0,31,985	1/1:5,1:6:9.86:118,10,0	1/1:8,2:10:8.45:125,8,0	0/0:17,0:16:41.92:0,42,623	0/0:14,0:14:39.07:0,39,726	0/0:12,0:12:6.35:0,6,399	0/0:23,0:23:36.06:0,36,883	0/0:25,0:24:69.06:0,69,1391	0/0:16,0:13:22.41:0,22,374	0/0:17,0:15:42.05:0,42,895	0/0:13,0:12:32.89:0,33,582	0/0:8,0:8:3.01:0,3,47	0/1:6,1:6:0:0,0,0	1/1:20,1:21:3.01:58,3,0	0/0:15,0:15:36.04:0,36,584	0/0:25,0:25:67.25:0,67,1407	0/0:17,0:17:45.07:0,45,878	0/0:8,0:7:14.47:0,14,270
chr10	75324807	.	GTC	G	821.25	PASS	AB=0.883;AC=14;AF=0.250;AN=56;BaseQRankSum=10.206;DP=478;FS=36.271;HRun=0;HaplotypeScore=58.7724;InbreedingCoeff=0.5727;MQ=54.60;MQ0=31;MQRankSum=0.997;QD=5.62;ReadPosRankSum=3.145;VQSLOD=1.3694;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:0.10:0,0,0	0/0:6,0:6:0.03:0,0,200	0/0:36,0:8:4.47:0,4,72	0/1:39,0:10:3.13:3,0,116	0/0:19,0:19:24.80:0,25,692	0/0:21,0:21:11.33:0,11,660	0/0:11,0:11:20.18:0,20,369	0/1:28,0:24:3.66:4,0,438	1/1:0,7:7:6.02:91,6,0	0/0:15,0:14:34.63:0,35,545	0/0:19,0:19:24.36:0,24,707	1/1:4,2:6:17.98:185,18,0	1/1:2,8:10:24.04:319,24,0	0/0:17,0:16:19.33:0,19,465	0/0:15,0:15:42.04:0,42,574	0/0:11,0:11:10.79:0,11,274	0/0:24,0:24:29.20:0,29,656	0/0:25,0:24:38.74:0,39,938	0/0:17,0:14:15.79:0,16,298	0/0:17,0:16:45.05:0,45,678	0/0:13,0:12:13.34:0,13,401	0/1:1,7:8:11.45:82,0,11	1/1:3,4:6:3.01:46,3,0	1/1:3,18:21:18.04:252,18,0	0/0:15,0:15:26.19:0,26,435	0/0:25,0:25:29.72:0,30,966	0/0:18,0:18:48.07:0,48,707	0/0:8,0:7:3.68:0,4,177
chr10	75325443	.	GAA	G	881.75	PASS	AB=0.837;AC=14;AF=0.250;AN=56;BaseQRankSum=5.066;DP=496;FS=2.535;HRun=16;HaplotypeScore=63.1634;InbreedingCoeff=0.6100;MQ=56.40;MQ0=16;MQRankSum=1.083;QD=6.04;ReadPosRankSum=2.920;VQSLOD=-0.4774;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,1:30:39.18:0,39,677	0/0:10,0:12:17.40:0,17,174	0/0:19,0:5:14.01:0,14,89	0/1:15,0:8:3.73:4,0,29	0/0:15,0:15:6.13:0,6,223	0/0:10,0:13:3.27:0,3,207	0/0:15,1:17:18.61:0,19,393	0/0:17,0:14:17.93:0,18,160	1/1:3,9:15:32.39:247,32,0	0/0:18,0:18:38.38:0,38,412	0/0:20,0:23:37.86:0,38,418	1/1:5,5:11:11.60:87,12,0	1/1:6,5:10:11.82:100,12,0	0/0:17,0:17:30.08:0,30,376	0/0:12,1:16:5.99:0,6,218	0/0:11,0:13:30.04:0,30,362	0/0:25,0:26:68.45:0,68,794	0/0:22,0:29:57.54:0,58,579	0/0:9,0:11:28.67:0,29,267	0/0:18,0:19:27.83:0,28,252	0/0:14,0:15:12.51:0,13,149	1/1:13,4:16:17.25:162,17,0	0/1:5,2:8:10.20:56,0,10	1/1:7,12:25:54.42:391,54,0	0/1:14,1:18:1.63:2,0,232	0/1:19,1:21:4.76:5,0,317	0/0:22,0:25:39.08:0,39,480	0/0:8,0:7:8.39:0,8,87
chr10	75325527	.	GA	G	2285.60	PASS	AB=0.896;AC=14;AF=0.250;AN=56;BaseQRankSum=10.711;DP=576;FS=30.244;HRun=10;HaplotypeScore=60.2526;InbreedingCoeff=0.8128;MQ=63.25;MQ0=4;MQRankSum=0.912;QD=15.65;ReadPosRankSum=1.181;VQSLOD=2.0896;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.22:0,81,896	0/0:10,0:10:27.07:0,27,299	0/1:9,1:7:10.76:11,0,79	0/1:13,2:10:70.02:70,0,100	0/0:19,0:21:56.93:0,57,589	0/0:18,1:20:30.94:0,31,552	0/0:11,0:11:27.07:0,27,299	0/0:22,1:25:33.77:0,34,566	1/1:3,17:20:41.98:365,42,0	0/0:30,0:33:83.73:0,84,872	0/0:24,0:24:63.16:0,63,690	1/1:1,15:16:38.98:339,39,0	1/1:2,14:16:35.97:309,36,0	0/0:19,0:19:48.07:0,48,509	0/0:15,0:16:44.95:0,45,479	0/0:20,0:20:45.12:0,45,498	0/0:18,0:18:51.13:0,51,556	0/0:35,1:37:79.02:0,79,1063	0/0:24,0:24:69.14:0,69,736	0/0:30,0:30:52.71:0,53,757	0/0:24,1:25:37.13:0,37,638	1/1:3,19:22:47.98:417,48,0	1/1:4,20:24:29.80:487,30,0	1/1:4,19:23:56.86:481,57,0	0/0:13,1:14:16.06:0,16,405	0/0:29,0:29:53.29:0,53,768	0/0:16,0:15:48.11:0,48,516	0/0:7,0:8:20.89:0,21,213
chr10	75325625	.	AGTCG	A	5115.93	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.739;DP=577;FS=0.884;HRun=0;HaplotypeScore=97.6583;InbreedingCoeff=0.9881;MQ=74.06;MQ0=0;MQRankSum=-3.655;QD=47.81;ReadPosRankSum=3.046;VQSLOD=5.3758;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,2700	0/0:3,0:3:9.03:0,9,244	0/0:31,0:31:87.30:0,87,2160	0/0:15,0:16:45.02:0,45,1158	0/0:22,0:22:63.22:0,63,1694	0/0:19,0:19:57.20:0,57,1544	0/0:21,0:21:63.20:0,63,1668	0/0:28,0:28:69.19:0,69,1658	1/1:1,17:18:51.17:988,51,0	0/0:22,0:22:63.20:0,63,1579	0/0:16,0:16:48.16:0,48,1312	1/1:0,15:15:39.13:756,39,0	1/1:0,16:16:42.14:814,42,0	0/0:21,0:21:57.13:0,57,1442	0/0:17,0:17:51.18:0,51,1396	0/0:22,0:22:66.23:0,66,1805	0/0:27,0:27:78.27:0,78,2136	0/0:20,0:20:57.20:0,57,1548	0/0:31,0:31:87.30:0,87,2377	0/0:16,0:16:42.14:0,42,1112	0/0:30,0:30:87.30:0,87,2381	1/1:2,20:22:54.19:1046,54,0	1/1:0,21:21:42.14:814,42,0	1/1:1,14:15:36.12:698,36,0	0/0:12,0:12:33.11:0,33,903	0/0:27,0:27:81.28:0,81,2209	0/0:24,0:23:72.23:0,72,1881	0/0:11,0:11:33.11:0,33,903
chr10	75327451	.	CTT	C	774.90	PASS	AB=0.744;AC=14;AF=0.250;AN=56;BaseQRankSum=7.048;DP=536;FS=1.241;HRun=17;HaplotypeScore=66.6842;InbreedingCoeff=0.8230;MQ=63.36;MQ0=3;MQRankSum=1.674;QD=5.83;ReadPosRankSum=4.338;VQSLOD=-0.7494;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,12:24:14.33:154,14,0	0/0:10,0:14:31.68:0,32,294	0/0:15,0:10:5.26:0,5,41	0/1:7,0:3:0.04:0,0,0	0/0:25,0:28:36.06:0,36,520	0/0:20,1:25:35.46:0,35,529	0/0:12,0:14:13.76:0,14,118	0/0:30,0:30:60.92:0,61,650	1/1:6,7:15:8.83:107,9,0	0/0:18,1:21:4.36:0,4,175	0/0:15,0:19:40.07:0,40,387	1/1:5,8:13:14.72:119,15,0	1/1:2,15:17:20.33:165,20,0	0/0:15,0:17:29.27:0,29,241	0/0:14,0:17:37.77:0,38,370	0/0:15,0:18:33.06:0,33,296	0/0:15,0:15:35.41:0,35,370	0/0:13,0:12:29.59:0,30,290	0/0:17,0:19:35.46:0,35,402	0/0:20,0:26:52:0,52,487	0/0:11,0:11:21.02:0,21,233	0/1:5,9:15:5.31:101,0,5	1/1:8,18:27:13.55:155,14,0	1/1:4,7:13:20.68:154,21,0	0/0:21,0:21:47.93:0,48,473	0/0:24,0:28:46.71:0,47,414	0/0:22,0:24:47.57:0,48,479	0/0:17,0:20:49.13:0,49,506
chr10	75329210	.	AGG	A	1830.59	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=3.663;DP=379;FS=6.482;HRun=9;HaplotypeScore=63.1184;InbreedingCoeff=0.7990;MQ=90.17;MQ0=9;MQRankSum=-2.049;QD=21.79;ReadPosRankSum=3.958;VQSLOD=2.3901;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:30.08:0,30,432	./.	0/0:72,1:33:6.70:0,7,383	0/0:48,0:23:9.63:0,10,238	0/0:6,0:6:12.03:0,12,173	0/0:3,0:3:9.03:0,9,140	0/0:19,0:20:34.36:0,34,456	0/0:7,0:7:8.99:0,9,115	1/1:4,10:15:29.82:326,30,0	0/0:6,0:6:6.01:0,6,77	0/0:5,0:5:12.04:0,12,177	1/1:6,11:16:20.57:391,21,0	1/1:3,14:17:36.09:419,36,0	0/0:11,0:11:30.08:0,30,426	0/0:16,0:17:42.14:0,42,666	0/0:11,0:11:24.08:0,24,372	0/0:11,0:11:17.98:0,18,263	0/0:4,0:4:5.99:0,6,71	0/0:6,0:6:6.49:0,6,99	0/0:7,0:8:9.02:0,9,124	0/0:20,0:20:42.14:0,42,662	1/1:1,15:16:39.11:454,39,0	1/1:2,3:5:6.02:69,6,0	1/1:3,10:13:30.09:347,30,0	0/0:6,0:6:12.04:0,12,196	0/0:5,0:5:9.03:0,9,141	0/0:12,0:12:30.10:0,30,487	0/0:3,0:3:2.99:0,3,24
chr10	75329423	.	G	GAGAGAC	799.33	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=4.915;DP=622;FS=5.866;HRun=0;HaplotypeScore=121.7634;InbreedingCoeff=0.7846;MQ=56.29;MQ0=31;MQRankSum=-3.213;QD=7.61;ReadPosRankSum=-3.126;VQSLOD=0.8043;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:63.13:0,63,1174	0/0:3,0:3:6.02:0,6,130	0/0:53,0:26:34.78:0,35,630	0/0:89,0:34:32:0,32,472	0/0:21,0:21:36.10:0,36,705	0/0:13,0:13:30.09:0,30,605	0/0:21,0:20:30.10:0,30,615	0/0:22,0:20:30.06:0,30,471	1/1:10,5:14:12.02:202,12,0	0/0:26,0:26:57.18:0,57,1159	0/0:10,0:10:24.06:0,24,427	1/1:20,0:19:3.01:43,3,0	1/1:26,5:28:35.71:665,36,0	0/0:10,0:10:27.08:0,27,526	0/0:24,0:24:44.91:0,45,769	0/0:20,0:20:39.09:0,39,742	0/0:25,0:24:18.04:0,18,258	0/0:17,0:17:36.12:0,36,746	0/0:25,0:23:39.04:0,39,682	0/0:10,0:10:21.07:0,21,424	0/0:24,0:23:54.18:0,54,1094	./.	1/1:15,2:15:3:25,3,0	0/1:22,0:21:0.13:0,0,19	0/0:15,0:15:36.11:0,36,680	0/0:13,0:13:24.08:0,24,505	0/0:12,0:12:27.05:0,27,501	0/0:17,0:15:27.09:0,27,558
chr10	75329447	.	CAG	C	393.28	PASS	AB=0.927;AC=17;AF=0.405;AN=42;BaseQRankSum=0.007;DP=541;FS=4.497;HRun=0;HaplotypeScore=72.8733;InbreedingCoeff=0.2147;MQ=47.32;MQ0=34;MQRankSum=1.926;QD=1.80;ReadPosRankSum=0.757;VQSLOD=1.4064;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,1:32:28.42:57,0,28	./.	./.	0/0:54,0:10:0:0,0,0	./.	0/0:14,0:14:5.67:0,6,36	0/0:25,0:23:8.87:0,9,90	0/0:22,0:19:1.25:0,1,3	0/0:15,0:14:2.04:0,2,6	0/0:27,0:24:8.02:0,8,44	./.	0/1:16,0:14:0.05:2,0,0	0/1:31,0:29:27.49:40,0,27	./.	0/0:22,0:21:14.98:0,15,139	1/1:10,5:16:5.85:46,6,0	0/0:20,0:19:2.30:0,2,29	0/1:11,7:18:13.08:83,0,13	./.	./.	1/1:26,0:26:16.98:111,17,0	1/1:12,0:12:3.33:24,3,0	0/0:17,0:15:0:0,0,0	1/1:23,0:21:2.19:19,2,0	0/0:11,0:11:2.99:0,3,23	0/1:14,0:14:27.11:27,0,41	1/1:12,0:13:11.68:91,12,0	1/1:15,0:13:1.94:20,2,0
chr10	75329947	.	CAT	C	335.07	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.863;DP=349;FS=10.420;HRun=0;HaplotypeScore=48.5862;InbreedingCoeff=0.8848;MQ=70.09;MQ0=4;MQRankSum=0.809;QD=6.98;ReadPosRankSum=1.791;VQSLOD=1.6117;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:45.03:0,45,637	0/0:7,0:7:20.97:0,21,260	0/0:15,0:12:15.97:0,16,216	0/0:7,0:6:11.19:0,11,136	0/0:13,0:13:30.03:0,30,377	0/0:15,0:15:42.01:0,42,537	0/0:12,0:10:21.47:0,21,331	0/0:24,0:24:59.46:0,59,633	1/1:7,0:7:5.75:31,6,0	0/0:11,0:11:30.05:0,30,343	0/0:12,0:12:23.89:0,24,208	1/1:6,1:7:5.70:31,6,0	1/1:6,1:7:11.66:90,12,0	0/0:13,0:13:35.99:0,36,459	0/0:8,0:7:9.03:0,9,134	0/0:7,0:7:14.96:0,15,165	0/0:22,0:22:56.95:0,57,716	0/0:15,0:14:41.96:0,42,533	0/0:18,0:17:44.86:0,45,476	0/0:17,0:17:35.92:0,36,354	0/0:11,0:11:32.80:0,33,314	1/1:5,1:6:8.80:79,9,0	1/1:10,0:10:8.54:130,9,0	1/1:6,5:11:14.64:141,15,0	0/0:11,0:11:29.95:0,30,344	0/0:20,0:20:51.08:0,51,647	0/0:16,0:15:22.84:0,23,301	0/0:7,0:7:15.01:0,15,195
chr10	75329949	.	TA	T	589.07	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.879;DP=351;FS=14.170;HRun=1;HaplotypeScore=45.9179;InbreedingCoeff=0.9028;MQ=66.55;MQ0=6;MQRankSum=-0.383;QD=12.02;ReadPosRankSum=-1.302;VQSLOD=0.2372;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:43.18:0,43,464	0/0:7,0:7:20.06:0,20,195	0/0:13,0:10:21.62:0,22,211	0/0:7,0:6:8.27:0,8,108	0/0:11,0:11:29.54:0,30,296	0/0:16,0:16:40.78:0,41,402	0/0:14,0:11:28.83:0,29,276	0/0:24,0:24:57.73:0,58,534	1/1:0,6:6:6.02:81,6,0	0/0:13,0:13:29.80:0,30,286	0/0:10,0:10:23.13:0,23,192	1/1:1,6:7:6.91:83,7,0	1/1:2,6:8:12.03:147,12,0	0/0:13,0:13:35.97:0,36,356	0/0:6,0:5:8.26:0,8,91	0/0:7,0:7:14.83:0,15,138	0/0:23,0:23:54.16:0,54,523	0/0:16,0:15:41:0,41,410	0/0:19,0:18:46.74:0,47,402	0/0:16,1:17:34.25:0,34,281	0/0:13,0:12:31.82:0,32,262	1/1:2,5:7:9.41:87,9,0	1/1:7,1:8:22.10:186,22,0	1/1:8,4:13:18:177,18,0	0/0:13,0:13:28.58:0,29,267	0/0:18,0:18:50.97:0,51,519	0/0:16,0:15:26.58:0,27,254	0/0:6,0:6:14.95:0,15,155
chr10	75330074	.	A	AATT	221.76	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=1.182;DP=399;FS=4.012;HRun=0;HaplotypeScore=63.6689;InbreedingCoeff=0.6592;MQ=59.81;MQ0=10;MQRankSum=-3.076;QD=2.52;ReadPosRankSum=-4.100;VQSLOD=0.3725;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:33:15.05:270,15,0	0/0:2,0:2:6:0,6,63	0/0:42,0:10:21.71:0,22,219	0/1:33,0:6:2.88:3,0,70	0/0:16,0:16:38.40:0,38,412	0/0:10,0:10:19.91:0,20,270	0/0:15,0:15:38.92:0,39,475	0/0:14,0:13:36.10:0,36,438	1/1:0,0:1:0.47:1,0,0	0/0:13,0:13:29.99:0,30,334	0/0:8,0:8:23.91:0,24,280	1/1:2,0:2:3.37:17,3,0	1/1:5,0:4:1.72:4,2,0	0/0:9,0:9:24.03:0,24,297	0/0:3,0:2:2.95:0,3,41	0/0:7,0:6:14.70:0,15,168	0/0:41,0:41:95.18:0,95,1236	0/0:24,0:24:28.44:0,28,573	0/0:20,0:19:46.23:0,46,492	0/0:10,0:10:22.99:0,23,315	0/0:11,0:9:18:0,18,209	0/0:5,0:4:1.93:0,2,31	1/1:4,0:4:9.50:47,10,0	1/1:8,0:9:3.73:17,4,0	0/0:12,0:12:29.73:0,30,346	0/0:14,0:14:26.30:0,26,354	0/0:15,0:15:33.58:0,34,400	0/0:20,0:20:50.94:0,51,581
chr10	75330894	.	GA	G	1267.52	PASS	AB=0.721;AC=23;AF=0.411;AN=56;BaseQRankSum=-4.187;DP=587;FS=9.446;HRun=17;HaplotypeScore=80.2490;InbreedingCoeff=-0.1279;MQ=75.24;MQ0=2;MQRankSum=-1.014;QD=3.47;ReadPosRankSum=2.556;VQSLOD=-0.2108;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:26:5.66:44,6,0	0/1:4,5:9:18.13:18,0,49	0/0:37,0:11:2.80:0,3,13	0/0:23,1:18:6.30:0,6,34	0/1:15,8:24:42.24:123,0,42	0/1:18,6:31:0.80:128,0,1	0/1:10,5:16:34.90:35,0,46	0/1:19,5:27:48.56:104,0,49	0/0:29,1:30:49.44:0,49,255	0/0:13,1:16:0.02:0,0,55	0/1:12,8:21:25.98:64,0,26	0/0:14,0:14:32.93:0,33,152	0/0:21,1:22:28.37:0,28,195	0/1:6,2:9:9.98:10,0,38	0/1:6,10:17:25.77:53,0,26	1/1:12,2:15:18.09:92,18,0	0/1:10,6:19:7.42:36,0,7	1/1:14,4:19:26.43:133,26,0	1/1:7,9:17:29.02:147,29,0	0/1:20,8:30:72.56:86,0,73	0/1:8,2:10:18.56:19,0,55	0/0:33,1:34:39.25:0,39,263	0/0:27,1:28:38.17:0,38,214	0/0:16,0:16:35.97:0,36,166	0/1:8,6:14:29.89:39,0,30	0/1:12,6:18:39.19:86,0,39	0/1:12,4:17:37.41:65,0,37	0/1:15,10:26:58.89:158,0,59
chr10	75330907	.	A	AC	926.26	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=2.473;DP=614;FS=47.715;HRun=0;HaplotypeScore=79.2662;InbreedingCoeff=0.8181;MQ=67.87;MQ0=2;MQRankSum=1.843;QD=6.81;ReadPosRankSum=4.824;VQSLOD=1.6301;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:44.57:0,45,324	0/0:8,0:8:15.88:0,16,142	0/0:35,0:6:10.66:0,11,64	0/0:22,0:14:26.32:0,26,181	0/0:28,0:28:78.70:0,79,605	0/0:33,0:33:98.68:0,99,810	0/0:19,0:19:50.80:0,51,426	0/0:35,0:35:98.47:0,98,833	1/1:29,1:30:21.78:263,22,0	0/0:19,0:19:53.69:0,54,466	0/0:22,0:22:57.57:0,58,449	0/1:15,0:15:6.76:130,0,7	1/1:19,0:19:1.69:104,2,0	0/0:11,0:11:29.96:0,30,268	0/0:20,0:20:38.91:0,39,333	0/0:14,0:14:41.79:0,42,337	0/0:20,0:20:44.88:0,45,366	0/0:19,0:19:50.78:0,51,391	0/0:17,0:17:44.81:0,45,346	0/0:31,0:31:86.69:0,87,751	0/0:9,0:9:23.98:0,24,226	1/1:32,1:33:30.96:251,31,0	1/1:18,3:22:18.82:249,19,0	1/1:17,0:17:5.83:92,6,0	0/0:16,0:16:38.95:0,39,353	0/0:24,0:24:70.65:0,71,606	0/0:23,0:23:62.75:0,63,534	0/0:33,0:33:98.76:0,99,829
chr10	75332013	.	T	TTTA	3462.82	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.735;DP=603;FS=10.928;HRun=0;HaplotypeScore=117.6776;InbreedingCoeff=0.9836;MQ=64.51;MQ0=9;MQRankSum=-8.646;QD=37.64;ReadPosRankSum=0.420;VQSLOD=4.2241;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.11:0,78,1036	0/0:8,0:8:15.49:0,15,159	0/0:35,0:10:9.76:0,10,130	0/0:20,0:10:18.42:0,18,150	0/0:28,0:28:66.69:0,67,981	0/0:26,0:26:63.98:0,64,929	0/0:17,0:17:44.97:0,45,551	0/0:34,0:34:81.17:0,81,1088	1/1:19,0:19:53.94:826,54,0	0/0:24,0:24:55.32:0,55,703	0/0:23,0:23:61.01:0,61,874	1/1:10,0:10:20.99:342,21,0	1/1:13,0:13:39.10:583,39,0	0/0:16,0:16:36.10:0,36,535	0/0:19,0:19:48.08:0,48,677	0/0:12,0:12:30.07:0,30,431	0/0:40,0:40:95.39:0,95,1263	0/0:20,0:20:57.07:0,57,764	0/0:27,0:27:77.87:0,78,968	0/0:30,0:30:73.45:0,73,923	0/0:10,0:10:20.76:0,21,237	1/1:17,0:17:41.90:548,42,0	1/1:12,4:16:39.09:674,39,0	1/1:17,0:17:32.86:490,33,0	0/0:19,0:19:54.12:0,54,752	0/0:14,0:14:38.93:0,39,469	0/0:42,0:41:97.79:0,98,1131	0/0:17,0:17:36.12:0,36,585
chr10	75332015	.	T	TA	1360.04	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.925;DP=599;FS=5.758;HRun=0;HaplotypeScore=88.3899;InbreedingCoeff=0.9912;MQ=63.62;MQ0=9;MQRankSum=-8.174;QD=15.46;ReadPosRankSum=2.163;VQSLOD=5.7339;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.02:0,87,959	0/0:7,0:7:20.97:0,21,193	0/0:34,0:9:16.62:0,17,134	0/0:21,0:11:18.79:0,19,138	0/0:30,0:30:70.05:0,70,852	0/0:26,0:26:72.57:0,73,890	0/0:15,0:15:42.84:0,43,467	0/0:33,0:33:87.11:0,87,1002	1/1:6,12:18:51.93:389,52,0	0/0:21,0:21:55.35:0,55,639	0/0:23,0:23:65.92:0,66,771	1/1:2,6:8:20.79:147,21,0	1/1:6,7:13:36.18:255,36,0	0/0:18,0:18:42.11:0,42,520	0/0:20,0:20:54.08:0,54,631	0/0:12,0:12:36.08:0,36,422	0/0:40,0:40:99:0,113,1232	0/0:19,0:19:55:0,55,667	0/0:29,0:29:70.34:0,70,806	0/0:30,0:30:84.33:0,84,910	0/0:9,0:9:18.90:0,19,190	1/1:11,6:17:29.61:263,30,0	1/1:4,11:15:37.91:267,38,0	1/1:7,10:17:17.57:227,18,0	0/0:20,0:20:58.95:0,59,706	0/0:15,0:15:34.90:0,35,411	0/0:42,0:41:99:0,118,1201	0/0:18,0:18:44.81:0,45,548
chr10	75332017	.	T	TTA	1394.51	PASS	AB=0.630;AC=11;AF=0.196;AN=56;BaseQRankSum=12.504;DP=594;FS=0.000;HRun=0;HaplotypeScore=93.3471;InbreedingCoeff=0.8914;MQ=62.60;MQ0=10;MQRankSum=-7.835;QD=16.80;ReadPosRankSum=3.081;VQSLOD=3.2643;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.04:0,84,985	0/0:7,0:7:20.98:0,21,197	0/0:34,0:8:10.47:0,10,108	0/0:23,0:11:7.02:0,7,117	0/0:30,0:30:70.90:0,71,945	0/0:26,0:26:62.49:0,62,928	0/0:14,0:14:41.92:0,42,493	0/0:32,0:32:78.12:0,78,974	1/1:5,12:17:31.23:379,31,0	0/0:21,0:21:53.98:0,54,655	0/0:24,0:24:68.89:0,69,848	1/1:2,6:8:11.32:147,11,0	1/1:4,7:11:32.49:260,32,0	0/0:17,0:17:45.11:0,45,581	0/0:20,0:20:57.07:0,57,689	0/0:12,0:12:36.08:0,36,447	0/0:39,0:39:99:0,110,1277	0/0:19,0:19:57:0,57,729	0/0:30,0:30:84.36:0,84,975	0/0:30,0:30:73.84:0,74,935	0/0:10,0:10:23.72:0,24,233	1/1:9,6:15:14.75:226,15,0	1/1:4,11:15:38.52:325,39,0	0/1:7,10:17:2.33:233,0,2	0/0:19,0:19:57.10:0,57,739	0/0:14,0:14:41.77:0,42,483	0/0:42,0:41:99:0,119,1271	0/0:19,0:19:48.03:0,48,621
chr10	75334074	.	AACAG	A	4622.49	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.391;DP=654;FS=1.875;HRun=0;HaplotypeScore=111.8260;InbreedingCoeff=0.9981;MQ=65.79;MQ0=1;MQRankSum=-0.511;QD=33.50;ReadPosRankSum=2.298;VQSLOD=5.1274;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:45.13:0,45,1003	0/0:7,0:7:18.05:0,18,394	0/0:20,0:20:39.09:0,39,795	0/0:27,0:23:33.11:0,33,743	0/0:31,0:31:72.20:0,72,1583	0/0:31,0:31:78.27:0,78,1844	0/0:19,0:19:45.13:0,45,1046	0/0:30,0:30:54.19:0,54,1275	1/1:5,16:21:36.12:599,36,0	0/0:29,0:29:63.21:0,63,1472	0/0:13,0:13:30.09:0,30,659	1/1:5,14:19:39.13:649,39,0	1/1:6,21:27:51.17:848,51,0	0/0:14,0:14:36.12:0,36,876	0/0:28,0:27:69.24:0,69,1645	0/0:20,0:20:57.20:0,57,1388	0/0:23,0:23:48.16:0,48,1176	0/0:19,0:19:39.13:0,39,960	0/0:20,0:20:48.15:0,48,1127	0/0:21,0:21:51.18:0,51,1249	0/0:34,0:34:84.23:0,84,1869	1/1:6,16:22:50.88:752,51,0	1/1:4,24:28:69.12:1086,69,0	1/1:3,18:21:45.07:689,45,0	0/0:20,0:20:45.15:0,45,1107	0/0:36,0:36:75.26:0,75,1821	0/0:31,0:31:84.29:0,84,2014	0/0:18,0:18:42.14:0,42,1025
chr10	75334778	.	AT	A	5026.38	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=17.011;DP=733;FS=22.300;HRun=3;HaplotypeScore=84.3903;InbreedingCoeff=0.9994;MQ=82.78;MQ0=0;MQRankSum=-5.004;QD=32.22;ReadPosRankSum=2.422;VQSLOD=3.0991;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1526	0/0:12,0:12:36.09:0,36,481	0/0:29,0:29:71.73:0,72,969	0/0:19,0:19:54.13:0,54,711	0/0:33,0:33:99:0,99,1383	0/0:18,0:17:51.16:0,51,712	0/0:28,0:28:81.19:0,81,1057	0/0:28,0:28:75.21:0,75,989	1/1:1,23:24:23.03:737,23,0	0/0:40,0:40:99:0,117,1661	0/0:16,0:16:48.14:0,48,655	1/1:1,36:37:93.29:1152,93,0	1/1:0,24:24:66.10:816,66,0	0/0:33,0:33:99:0,99,1389	0/0:24,0:24:72.20:0,72,980	0/0:38,0:38:99:0,111,1581	0/0:24,0:24:72.15:0,72,949	0/0:18,0:18:51.15:0,51,703	0/0:30,0:30:87.24:0,87,1155	0/0:23,0:23:66.22:0,66,939	0/0:30,0:30:90.30:0,90,1290	1/1:0,22:22:60.17:725,60,0	1/1:0,22:22:57.18:706,57,0	1/1:3,24:27:72.23:891,72,0	0/0:13,0:13:36.12:0,36,518	0/0:37,0:37:99:0,105,1463	0/0:32,0:32:90.27:0,90,1243	0/0:12,0:12:36.12:0,36,516
chr10	75335477	.	TC	T	3083.58	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=11.982;DP=578;FS=4.505;HRun=4;HaplotypeScore=64.9604;InbreedingCoeff=0.9818;MQ=51.80;MQ0=18;MQRankSum=-1.190;QD=28.29;ReadPosRankSum=0.841;VQSLOD=3.3716;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,1379	0/0:6,0:6:18.06:0,18,252	./.	./.	0/0:35,0:32:72.24:0,72,1007	0/0:31,0:30:87.25:0,87,1194	0/0:27,0:27:63.21:0,63,881	0/0:30,0:27:78.22:0,78,1064	1/1:0,20:19:48.15:576,48,0	0/0:19,0:19:57.19:0,57,793	0/0:18,0:18:48.16:0,48,672	1/1:2,18:19:15.20:590,15,0	1/1:1,12:13:36.11:426,36,0	0/0:13,0:13:33.09:0,33,442	0/0:21,0:20:57.18:0,57,781	0/0:28,0:27:81.27:0,81,1133	0/0:44,0:44:99:0,123,1681	0/0:16,0:15:42.03:0,42,561	0/0:18,0:16:39.12:0,39,527	0/0:20,0:19:57.19:0,57,797	0/0:27,0:25:69.23:0,69,962	1/1:2,20:22:21.25:667,21,0	1/1:2,13:13:33.10:396,33,0	1/1:1,18:18:51.16:612,51,0	0/0:9,0:9:24.08:0,24,336	0/0:28,0:28:84.28:0,84,1176	0/0:32,0:32:90.30:0,90,1260	0/0:5,0:3:9.01:0,9,107
chr10	75335523	.	A	AAAAC	5465.20	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=1.043;DP=622;FS=0.000;HRun=0;HaplotypeScore=105.2255;InbreedingCoeff=0.9684;MQ=60.76;MQ0=7;MQRankSum=-2.275;QD=45.93;ReadPosRankSum=0.996;VQSLOD=5.1707;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:66.19:0,66,1126	0/0:7,0:7:21.07:0,21,377	0/0:26,0:11:27:0,27,365	0/0:26,0:19:3.97:0,4,457	0/0:31,0:30:72.10:0,72,1189	0/0:24,0:23:69.18:0,69,1148	0/0:24,0:24:63.13:0,63,987	0/0:24,0:23:60.17:0,60,957	1/1:6,14:22:45.06:943,45,0	0/0:24,0:24:66.21:0,66,1108	0/0:21,0:21:48.16:0,48,836	1/1:3,15:18:27.32:1053,27,0	1/1:4,11:16:39.03:825,39,0	0/0:15,0:15:39.12:0,39,673	0/0:23,0:23:60.21:0,60,1061	0/0:29,0:29:72.70:0,73,1225	0/0:28,0:28:68.23:0,68,1120	0/0:21,0:21:54.18:0,54,960	0/0:27,0:25:57.10:0,57,869	0/0:19,0:18:54.19:0,54,970	0/0:18,0:18:42.10:0,42,714	1/1:9,14:24:36.28:1151,36,0	1/1:6,11:18:33.10:761,33,0	1/1:13,7:20:39.03:732,39,0	0/0:10,0:9:24.08:0,24,418	0/0:30,0:30:75.25:0,75,1321	0/0:33,0:33:78.26:0,78,1371	0/0:15,0:15:42.14:0,42,755
chr10	75335923	.	T	TAA	1969.21	PASS	AB=0.923;AC=13;AF=0.232;AN=56;BaseQRankSum=-3.396;DP=574;FS=0.509;HRun=12;HaplotypeScore=73.8332;InbreedingCoeff=0.8867;MQ=59.02;MQ0=8;MQRankSum=1.388;QD=17.74;ReadPosRankSum=-0.910;VQSLOD=2.5775;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:94.54:0,95,1023	0/0:5,0:5:11.97:0,12,111	0/0:8,0:5:12:0,12,110	0/1:11,0:8:14.19:14,0,100	0/0:27,0:29:69:0,69,638	0/0:18,0:18:22.36:0,22,366	0/0:28,0:28:56.91:0,57,521	0/0:29,0:31:44.35:0,44,481	1/1:3,14:19:33.03:419,33,0	0/0:23,0:23:43.80:0,44,393	0/0:21,0:22:23.83:0,24,341	1/1:0,17:17:39.13:547,39,0	1/1:3,8:12:17.54:211,18,0	0/0:22,0:22:50.83:0,51,466	0/0:28,0:28:74.98:0,75,683	0/0:15,0:15:26.97:0,27,250	0/0:24,0:24:63.01:0,63,572	0/0:18,0:19:35.77:0,36,318	0/0:22,0:21:47.23:0,47,408	0/0:20,0:20:50.82:0,51,443	0/0:18,0:19:32.66:0,33,289	1/1:2,10:13:17.87:202,18,0	1/1:7,8:14:24.08:336,24,0	1/1:4,16:23:32.40:429,32,0	0/0:17,0:17:42:0,42,384	0/0:27,0:27:50.93:0,51,472	0/0:13,0:13:39.04:0,39,360	0/0:11,0:11:32.96:0,33,294
chr10	75336462	.	T	TAAAA	3814.84	PASS	AB=0.958;AC=13;AF=0.232;AN=56;BaseQRankSum=-5.925;DP=596;FS=5.997;HRun=9;HaplotypeScore=89.6890;InbreedingCoeff=0.8877;MQ=60.18;MQ0=6;MQRankSum=-2.469;QD=34.06;ReadPosRankSum=1.533;VQSLOD=2.1077;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:66.19:0,66,965	0/0:7,0:7:21.07:0,21,307	0/0:8,0:7:21.05:0,21,275	0/0:6,0:5:5.97:0,6,88	0/0:27,0:26:68.94:0,69,989	0/0:23,0:23:45.04:0,45,639	0/0:16,0:16:45.13:0,45,651	0/0:45,0:42:99:0,108,1541	1/1:5,13:20:27.09:624,27,0	0/0:21,0:22:63.19:0,63,900	0/0:15,0:15:42.14:0,42,613	1/1:6,13:18:33.11:759,33,0	1/1:5,8:13:21.07:499,21,0	0/0:23,0:23:60.17:0,60,858	0/0:31,0:30:72.14:0,72,1033	0/1:21,1:23:9.02:9,0,792	0/0:31,0:31:72.20:0,72,1051	0/0:20,0:20:39.04:0,39,550	0/0:22,0:20:54.16:0,54,781	0/0:28,0:28:75.25:0,75,1094	0/0:26,0:26:72.21:0,72,1034	1/1:2,7:9:21.07:503,21,0	1/1:3,9:14:36.12:773,36,0	1/1:2,10:11:27.09:648,27,0	0/0:21,0:21:57.15:0,57,834	0/0:25,0:25:69.16:0,69,969	0/0:33,0:33:84.21:0,84,1209	0/0:18,0:18:54.18:0,54,790
chr10	75337295	.	A	AGT	4411.98	PASS	AB=0.769;AC=12;AF=0.214;AN=56;BaseQRankSum=-10.266;DP=629;FS=3.915;HRun=0;HaplotypeScore=88.3779;InbreedingCoeff=0.7903;MQ=64.67;MQ0=8;MQRankSum=1.632;QD=29.22;ReadPosRankSum=0.979;VQSLOD=6.2169;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:63.19:0,63,750	0/0:12,0:12:30.09:0,30,358	0/0:42,0:29:33.07:0,33,366	0/0:26,0:16:26.80:0,27,287	0/0:28,0:28:75.16:0,75,845	0/0:27,0:27:63.18:0,63,740	0/0:20,0:24:44.93:0,45,450	0/0:35,0:35:54.14:0,54,623	1/1:2,10:13:30.10:466,30,0	0/0:22,0:23:50.98:0,51,574	0/0:13,0:13:38.95:0,39,443	1/1:2,16:19:39.13:621,39,0	1/1:8,13:23:51:768,51,0	0/0:13,0:15:38.68:0,39,420	0/0:19,0:21:50.82:0,51,564	0/0:15,0:15:36.11:0,36,429	0/0:29,0:29:60.18:0,60,714	0/0:17,0:17:42.13:0,42,499	0/1:19,0:18:23.69:24,0,225	0/0:17,0:17:33.08:0,33,381	0/0:27,0:27:63.17:0,63,728	0/1:3,17:21:15.94:576,0,16	1/1:2,19:21:51.17:812,51,0	1/1:5,28:33:72.25:1146,72,0	0/0:22,0:22:54.15:0,54,620	0/0:20,0:20:51.16:0,51,608	0/0:26,0:27:72.04:0,72,824	0/0:9,0:10:23.85:0,24,219
chr10	75337864	.	A	ATAAG	667.30	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=1.493;DP=332;FS=7.915;HRun=0;HaplotypeScore=55.2641;InbreedingCoeff=0.8364;MQ=57.61;MQ0=2;MQRankSum=-2.530;QD=22.24;ReadPosRankSum=-0.241;VQSLOD=1.7120;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:36.11:0,36,594	0/0:11,0:11:27.03:0,27,337	0/0:17,0:11:27.02:0,27,265	0/0:9,0:4:5.81:0,6,66	0/0:14,0:14:24:0,24,278	0/0:20,0:20:53.98:0,54,745	0/0:5,0:5:11.96:0,12,121	0/0:33,0:33:69.15:0,69,968	1/1:5,2:7:20.95:267,21,0	0/0:8,0:8:15.04:0,15,237	0/0:12,0:12:27.01:0,27,404	1/1:1,6:7:6.02:152,6,0	1/1:3,0:3:5.91:39,6,0	0/0:12,0:12:21.06:0,21,334	0/0:9,0:9:18.02:0,18,231	0/0:5,0:5:6.01:0,6,77	0/0:23,0:23:51.06:0,51,786	0/0:12,0:12:24.05:0,24,355	0/0:16,0:16:39.08:0,39,502	0/0:11,0:11:21.04:0,21,307	0/0:8,0:8:17.99:0,18,223	./.	1/1:6,3:9:23.94:344,24,0	1/1:4,0:4:2.92:17,3,0	0/0:14,0:14:33.10:0,33,546	0/0:12,0:12:33.08:0,33,494	0/0:17,0:16:32.73:0,33,430	0/0:13,0:13:36.08:0,36,556
chr10	75338500	.	AG	A	413.12	PASS	AB=0.811;AC=3;AF=0.054;AN=56;BaseQRankSum=7.595;DP=610;FS=3.782;HRun=4;HaplotypeScore=61.4216;InbreedingCoeff=-0.0593;MQ=64.65;MQ0=0;MQRankSum=-7.285;QD=4.30;ReadPosRankSum=1.447;VQSLOD=0.0167;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:39,9:48:99:182,0,1401	0/0:8,0:8:21.05:0,21,262	0/0:21,0:19:54.13:0,54,717	0/0:24,0:24:60.01:0,60,746	0/0:27,0:27:77.92:0,78,1005	0/0:16,0:16:45.12:0,45,595	0/0:19,0:19:54.16:0,54,724	0/0:25,0:25:72.22:0,72,963	0/0:23,0:23:63.19:0,63,853	0/0:20,0:20:54.18:0,54,755	0/0:18,0:18:54.17:0,54,738	0/0:18,1:19:21.29:0,21,719	0/0:15,1:16:12.24:0,12,578	0/0:23,0:23:69.19:0,69,943	0/0:27,0:27:78.25:0,78,1073	0/0:26,0:26:78.21:0,78,1039	0/0:21,0:21:54.18:0,54,756	0/0:25,0:25:72.16:0,72,942	0/0:18,0:18:42.07:0,42,517	0/0:19,0:19:51.16:0,51,692	0/0:30,0:30:87.26:0,87,1177	0/0:21,1:22:24.27:0,24,743	0/1:16,4:20:83.49:83,0,588	0/1:19,9:28:99:248,0,596	0/0:16,0:16:48.16:0,48,671	0/0:26,0:26:78.19:0,78,1011	0/0:21,0:21:51.17:0,51,712	0/0:4,0:4:12.04:0,12,168
chr10	75338585	.	G	GC	5126.98	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-12.513;DP=645;FS=0.756;HRun=3;HaplotypeScore=61.5889;InbreedingCoeff=0.9995;MQ=66.67;MQ0=0;MQRankSum=0.670;QD=36.88;ReadPosRankSum=2.675;VQSLOD=5.3675;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.29:0,96,1152	0/0:9,0:9:27.08:0,27,324	0/0:22,0:22:56.82:0,57,645	0/0:17,0:14:39.09:0,39,449	0/0:38,0:38:99:0,108,1255	0/0:25,0:25:72.22:0,72,864	0/0:20,0:20:57.16:0,57,672	0/0:22,0:22:63.19:0,63,756	1/1:1,23:24:63.21:882,63,0	0/0:25,0:25:63.19:0,63,756	0/0:21,0:21:60.18:0,60,718	1/1:0,24:24:72.24:1008,72,0	1/1:0,15:15:42.14:588,42,0	0/0:19,0:19:51.14:0,51,598	0/0:33,0:33:93.28:0,93,1116	0/0:27,0:27:78.24:0,78,936	0/0:33,0:33:96.29:0,96,1152	0/0:13,0:13:33.10:0,33,395	0/0:13,0:13:36.09:0,36,411	0/0:14,0:14:30.09:0,30,360	0/0:38,0:38:99:0,114,1356	1/1:3,34:37:90.30:1259,90,0	1/1:1,15:16:45.15:630,45,0	1/1:1,22:23:55.74:760,56,0	0/0:21,0:21:57.17:0,57,684	0/0:30,0:30:87.27:0,87,1044	0/0:19,0:19:54.15:0,54,636	0/0:11,0:11:33.10:0,33,396
chr10	75340328	.	G	GA	2306.23	PASS	AB=0.822;AC=15;AF=0.268;AN=56;BaseQRankSum=-7.603;DP=485;FS=1.451;HRun=10;HaplotypeScore=52.3855;InbreedingCoeff=0.7142;MQ=69.83;MQ0=1;MQRankSum=0.340;QD=17.21;ReadPosRankSum=0.698;VQSLOD=4.1214;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:24:60.89:661,61,0	0/0:6,0:6:17.94:0,18,142	0/0:23,0:16:22.89:0,23,185	0/1:17,0:10:19.22:19,0,37	0/0:25,0:24:59.90:0,60,489	0/0:15,0:15:18.15:0,18,266	0/0:19,0:19:41.90:0,42,342	0/0:30,0:30:65.89:0,66,541	1/1:2,10:12:22.61:228,23,0	0/0:18,1:19:21.95:0,22,387	0/0:24,0:24:68.92:0,69,566	0/1:3,10:13:0.47:200,0,0	1/1:3,9:12:2.42:231,2,0	0/0:11,0:11:26.96:0,27,221	0/0:14,1:15:9.93:0,10,283	0/1:8,1:9:8.02:8,0,146	0/0:17,0:17:44.87:0,45,360	0/0:27,0:29:39.98:0,40,440	0/0:16,0:16:41.93:0,42,342	0/0:22,1:24:29.95:0,30,438	0/0:12,0:12:26.97:0,27,222	1/1:0,19:19:51.04:526,51,0	1/1:2,12:14:5.52:263,6,0	1/1:0,13:13:33.08:351,33,0	0/0:22,0:22:56.90:0,57,464	0/0:18,0:20:38.35:0,38,381	0/0:18,0:18:44.93:0,45,369	0/0:6,0:6:17.98:0,18,148
chr10	75341187	.	GA	G	1880.04	PASS	AB=0.981;AC=15;AF=0.268;AN=56;BaseQRankSum=4.789;DP=504;FS=36.381;HRun=9;HaplotypeScore=88.5832;InbreedingCoeff=0.8960;MQ=67.88;MQ0=15;MQRankSum=-4.459;QD=11.90;ReadPosRankSum=0.376;VQSLOD=0.6495;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:31:74.80:654,75,0	0/0:5,0:5:3.01:0,3,35	0/1:51,1:19:4.34:4,0,154	0/0:54,0:19:14.36:0,14,258	0/0:14,0:14:36.01:0,36,371	0/0:17,0:17:45.05:0,45,489	0/0:11,0:11:27.04:0,27,297	0/0:28,0:28:60.17:0,60,685	1/1:3,8:11:29.86:254,30,0	0/0:22,0:21:48.14:0,48,554	0/0:13,0:13:27.08:0,27,311	1/1:3,4:7:17.93:154,18,0	1/1:6,8:14:29.99:266,30,0	0/0:12,0:12:32.76:0,33,348	0/0:17,0:17:45:0,45,474	0/0:12,0:12:27.06:0,27,301	0/0:12,0:12:30.09:0,30,346	0/0:18,0:19:44.97:0,45,498	0/0:23,0:23:51.11:0,51,563	0/0:16,0:16:44.96:0,45,497	0/0:15,0:15:21.06:0,21,242	1/1:3,7:10:24:219,24,0	1/1:5,8:13:23.98:217,24,0	1/1:3,17:20:35.86:309,36,0	0/0:15,0:15:39.12:0,39,450	0/0:18,0:18:45.06:0,45,490	0/0:10,0:10:24.07:0,24,276	0/0:12,0:10:30.07:0,30,332
chr10	75341203	.	GA	G	277.18	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.216;DP=503;FS=5.152;HRun=9;HaplotypeScore=99.1877;InbreedingCoeff=0.6322;MQ=53.09;MQ0=53;MQRankSum=-3.908;QD=3.85;ReadPosRankSum=-2.659;VQSLOD=0.1190;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:35.49:0,35,118	0/0:1,0:1:2.60:0,3,10	0/0:43,0:7:1.28:0,1,11	0/0:58,0:15:5.88:0,6,124	0/0:9,0:9:8.81:0,9,30	0/0:17,0:15:7.06:0,7,20	0/0:12,0:10:13.66:0,14,47	0/0:26,0:23:22.54:0,23,58	1/1:4,9:12:7.32:146,7,0	0/0:21,0:16:19.11:0,19,74	0/0:14,0:9:10.91:0,11,36	1/1:6,3:8:7.44:79,7,0	1/1:5,5:10:14.83:112,15,0	0/0:13,0:13:7.59:0,8,60	0/0:15,0:13:3.11:0,3,41	0/0:13,0:11:7.51:0,8,34	0/0:14,0:13:15.20:0,15,49	0/0:16,0:15:15.09:0,15,67	0/0:25,0:21:23.92:0,24,87	0/0:15,0:11:22.83:0,23,102	0/0:18,0:17:14.36:0,14,51	0/0:7,4:11:2.50:0,2,22	1/1:7,6:10:0.85:2,1,0	1/1:15,12:21:9.98:78,10,0	0/0:16,0:13:11.92:0,12,67	0/0:19,0:17:23.58:0,24,103	0/0:9,0:8:10.14:0,10,38	0/0:17,0:13:21.83:0,22,127
chr10	75341209	.	AAAAGAGAGAGAGAGAGAGAGAG	A	2430.29	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-9.926;DP=491;FS=18.417;HRun=0;HaplotypeScore=213.2711;InbreedingCoeff=-0.3941;MQ=48.60;MQ0=64;MQRankSum=5.588;QD=6.73;ReadPosRankSum=-1.384;VQSLOD=1.2078;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,4:24:53.88:674,54,0	0/0:1,0:1:3.01:0,3,147	0/1:38,0:5:2.03:2,0,11	0/0:57,0:14:9.28:0,9,100	1/1:8,0:8:8.85:67,9,0	0/1:16,0:14:52:52,0,396	0/1:15,0:13:45.52:46,0,1008	0/1:29,0:24:37.15:434,0,37	0/0:14,0:12:30.72:0,31,320	0/1:20,0:15:99:194,0,676	0/1:13,0:8:51.56:52,0,236	0/0:9,0:8:18.20:0,18,129	0/0:8,0:8:9.87:0,10,119	0/1:11,0:11:65.15:65,0,606	0/1:17,0:13:94.89:95,0,863	0/1:14,0:11:52.88:53,0,1240	0/1:13,0:11:17.17:17,0,1147	0/1:17,0:15:99:132,0,1156	0/1:23,0:19:99:228,0,1352	0/1:16,0:11:86.01:86,0,675	0/1:17,0:16:49.19:49,0,1172	0/1:10,0:8:0.26:0,0,263	0/0:13,0:10:11.87:0,12,82	0/0:28,0:21:20.55:0,21,140	0/1:16,0:12:99:109,0,589	0/1:18,0:15:99:134,0,1070	0/1:7,0:6:45.56:46,0,239	0/1:19,0:13:58.30:58,0,1611
chr10	75342220	.	C	CT	455.12	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.890;DP=528;FS=0.777;HRun=12;HaplotypeScore=109.2404;InbreedingCoeff=0.8759;MQ=67.57;MQ0=1;MQRankSum=0.796;QD=15.17;ReadPosRankSum=0.664;VQSLOD=3.6597;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:41.16:550,41,0	0/0:10,0:10:20.81:0,21,153	0/0:19,0:15:17.62:0,18,116	0/0:15,0:16:12.44:0,12,128	0/0:19,0:19:40.46:0,40,268	0/0:23,0:23:44.57:0,45,320	0/0:11,0:11:29.71:0,30,207	0/0:25,1:26:7.93:0,8,222	0/0:11,0:11:26.39:0,26,185	0/0:16,0:16:23.79:0,24,173	0/0:15,0:15:26.74:0,27,197	0/0:20,0:21:45.70:0,46,306	0/0:14,0:14:37:0,37,265	0/0:17,0:17:32.80:0,33,241	0/0:14,0:14:23.81:0,24,175	0/0:14,0:14:29.82:0,30,219	0/0:32,0:36:76.40:0,76,541	0/0:22,0:22:50.64:0,51,372	0/0:20,1:21:17.54:0,18,282	0/0:15,0:15:44.73:0,45,326	0/0:24,1:27:35.19:0,35,392	0/0:15,0:15:29.80:0,30,217	0/0:18,0:18:49.94:0,50,348	0/0:14,0:16:42.51:0,43,284	0/0:14,0:14:32.73:0,33,237	0/0:26,0:26:56.50:0,57,412	0/0:24,0:24:40.79:0,41,300	0/0:15,1:17:17.59:0,18,281
chr10	75343740	.	G	GTCTA	8038.62	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-8.021;DP=600;FS=5.778;HRun=0;HaplotypeScore=105.2142;InbreedingCoeff=0.9982;MQ=81.42;MQ0=0;MQRankSum=-4.517;QD=61.36;ReadPosRankSum=2.397;VQSLOD=6.6786;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.27:0,78,1545	0/0:6,0:6:18.06:0,18,356	0/0:15,0:15:45.14:0,45,807	0/0:19,0:19:56.97:0,57,984	0/0:22,0:22:60.19:0,60,1147	0/0:17,0:17:48.14:0,48,903	0/0:16,0:16:45.14:0,45,852	0/0:32,0:32:93.29:0,93,1787	1/1:2,19:21:63.22:1754,63,0	0/0:27,0:27:72.01:0,72,1285	0/0:20,0:20:48.15:0,48,911	1/1:5,18:24:57.19:1532,57,0	1/1:3,10:15:36.12:992,36,0	0/0:30,0:30:84.29:0,84,1662	0/0:19,0:19:54.15:0,54,1005	0/0:22,0:22:63.20:0,63,1222	0/0:26,0:26:75.24:0,75,1446	0/0:21,0:21:60.13:0,60,1107	0/0:20,0:20:60.20:0,60,1165	0/0:18,0:18:54.14:0,54,970	0/0:36,0:36:99:0,105,2084	1/1:4,19:24:54.19:1497,54,0	1/1:3,11:16:29.70:835,30,0	1/1:5,25:31:52.42:1429,52,0	0/0:13,0:13:39.13:0,39,778	0/0:21,0:21:54.17:0,54,1043	0/0:30,0:30:90.27:0,90,1701	0/0:12,0:12:36.12:0,36,719
chr10	75344084	.	TA	T	1650.02	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=9.580;DP=405;FS=3.991;HRun=7;HaplotypeScore=38.8704;InbreedingCoeff=0.9052;MQ=72.39;MQ0=0;MQRankSum=0.177;QD=19.41;ReadPosRankSum=0.809;VQSLOD=2.8977;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.18:0,57,716	0/0:6,0:6:18.04:0,18,214	0/0:8,0:8:5.61:0,6,102	0/1:7,0:7:2.83:3,0,112	0/0:22,0:22:63.19:0,63,779	0/0:15,0:15:42.13:0,42,517	0/0:14,0:14:42.13:0,42,530	0/0:23,0:23:51.15:0,51,613	1/1:1,14:15:33.07:336,33,0	0/0:22,0:22:54.11:0,54,652	0/0:18,0:18:48.14:0,48,586	1/1:1,13:14:36.08:367,36,0	1/1:1,10:11:27.06:275,27,0	0/0:7,0:7:18.06:0,18,227	0/0:14,0:14:39.11:0,39,469	0/0:9,0:9:27.09:0,27,341	0/0:21,0:21:63.20:0,63,794	0/0:17,0:17:48.15:0,48,604	0/0:17,0:17:51.10:0,51,599	0/0:18,0:18:45.14:0,45,568	0/0:8,0:8:21.07:0,21,265	1/1:2,6:8:18.04:183,18,0	1/1:2,11:13:33.07:336,33,0	1/1:1,16:17:33.07:336,33,0	0/0:13,0:13:39.11:0,39,479	0/0:12,0:12:33.09:0,33,393	0/0:28,0:28:78.15:0,78,946	0/0:7,0:7:21.07:0,21,265
chr10	75344219	.	C	CCT	785.15	PASS	AB=0.949;AC=11;AF=0.196;AN=56;BaseQRankSum=2.859;DP=345;FS=6.347;HRun=0;HaplotypeScore=56.3528;InbreedingCoeff=0.6229;MQ=67.56;MQ0=10;MQRankSum=-1.065;QD=9.35;ReadPosRankSum=1.868;VQSLOD=2.0223;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:31.43:0,31,377	0/0:4,0:4:11.95:0,12,130	0/0:32,0:11:7:0,7,84	0/1:22,0:11:1.49:1,0,46	0/0:6,0:6:18.02:0,18,196	0/0:9,0:8:20.99:0,21,180	0/0:14,0:14:33.08:0,33,428	0/0:14,0:14:35.81:0,36,330	1/1:5,5:11:20.89:272,21,0	0/0:15,0:15:38.83:0,39,418	0/0:7,0:7:15.03:0,15,184	1/1:8,0:8:11.06:115,11,0	1/1:9,1:10:9.02:97,9,0	0/0:3,0:3:5.80:0,6,40	0/0:7,0:7:21:0,21,220	0/0:10,0:10:18.05:0,18,237	0/0:14,0:14:27.02:0,27,310	0/0:14,0:13:35.99:0,36,381	0/0:12,0:11:28.28:0,28,353	0/0:16,0:16:45.06:0,45,508	0/0:8,0:8:17.04:0,17,172	1/1:12,2:14:25.39:226,25,0	0/1:8,0:8:25.38:76,0,25	0/1:9,2:10:27.29:160,0,27	0/0:11,0:11:32.42:0,32,384	0/0:14,0:14:22.85:0,23,240	0/0:17,0:17:38.99:0,39,431	0/0:17,0:17:27.01:0,27,297
chr10	75347465	.	G	GTCT	10302.98	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-13.371;DP=787;FS=0.000;HRun=0;HaplotypeScore=109.3641;InbreedingCoeff=0.9999;MQ=85.29;MQ0=0;MQRankSum=-7.847;QD=49.06;ReadPosRankSum=2.797;VQSLOD=6.8038;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,35:38:84.20:1743,84,0	0/0:18,0:18:54.17:0,54,832	0/0:28,0:28:65.38:0,65,946	0/0:24,0:24:63.21:0,63,988	0/0:31,0:31:87.30:0,87,1376	0/0:15,0:15:42.14:0,42,661	0/0:33,0:33:93.30:0,93,1447	0/0:30,0:30:63.20:0,63,973	1/1:3,19:23:57.20:1245,57,0	0/0:31,0:31:90.30:0,90,1399	0/0:23,0:23:60.20:0,60,947	1/1:5,22:28:57.20:1244,57,0	1/1:6,28:35:84.29:1834,84,0	0/0:22,0:22:54.18:0,54,854	0/0:40,0:39:99:0,117,1852	0/0:36,0:36:90.31:0,90,1421	0/0:31,0:31:84.26:0,84,1303	0/0:14,0:14:34.32:0,34,500	0/0:18,0:18:42.13:0,42,645	0/0:32,0:32:84.29:0,84,1332	0/0:45,0:45:99:0,120,1815	1/1:3,32:37:84.20:1745,84,0	1/1:5,21:26:60.21:1311,60,0	1/1:1,22:23:54.19:1181,54,0	0/0:27,0:27:75.26:0,75,1188	0/0:33,0:33:90.31:0,90,1428	0/0:33,0:33:96.33:0,96,1522	0/0:13,0:13:36.12:0,36,571
chr10	75348556	.	T	TTTTTTG	5025.24	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.103;DP=671;FS=0.524;HRun=0;HaplotypeScore=136.4362;InbreedingCoeff=0.9820;MQ=65.86;MQ0=3;MQRankSum=-10.345;QD=42.59;ReadPosRankSum=-2.297;VQSLOD=4.4840;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,108,2039	0/0:7,0:7:18.06:0,18,377	0/0:35,0:29:27.22:0,27,421	0/0:28,0:15:11.10:0,11,187	0/0:34,0:34:90.26:0,90,1668	0/0:28,0:28:66.23:0,66,1327	0/0:12,0:12:21.04:0,21,320	0/0:30,0:29:50.89:0,51,872	1/1:2,11:13:12.04:392,12,0	0/0:30,0:30:75.26:0,75,1536	0/0:17,0:17:42.14:0,42,814	1/1:3,18:23:30.10:978,30,0	1/1:3,19:23:27.09:877,27,0	0/0:16,0:16:36.11:0,36,675	0/0:20,0:20:54.16:0,54,1028	0/0:17,0:17:39.13:0,39,790	0/0:36,0:36:93.31:0,93,1821	0/0:21,0:21:49.43:0,49,1000	0/0:41,0:40:81.20:0,81,1413	0/0:25,0:25:66.21:0,66,1308	0/0:14,0:14:27.09:0,27,525	1/1:7,16:24:42.13:1104,42,0	1/1:2,15:19:33.11:1033,33,0	1/1:2,12:15:21.07:642,21,0	0/0:19,0:19:45.15:0,45,907	0/0:37,0:37:90.30:0,90,1723	0/0:26,0:26:57.08:0,57,1081	0/0:15,0:15:33.11:0,33,691
chr10	75349216	.	C	CA	946.61	PASS	AB=0.917;AC=7;AF=0.125;AN=56;BaseQRankSum=-3.361;DP=778;FS=7.580;HRun=10;HaplotypeScore=130.4931;InbreedingCoeff=0.4211;MQ=65.52;MQ0=11;MQRankSum=1.060;QD=5.04;ReadPosRankSum=-3.800;VQSLOD=0.3148;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:29:72.34:0,72,572	0/0:13,1:14:3.98:0,4,238	0/0:64,0:20:2.62:0,3,65	0/1:87,0:36:45.87:46,0,132	0/0:30,1:32:13.97:0,14,502	0/0:26,0:28:49.55:0,50,462	0/1:18,3:21:16.06:16,0,296	0/0:33,0:33:62.51:0,63,536	0/0:20,0:21:20.93:0,21,342	0/0:19,0:20:21.15:0,21,366	0/0:15,1:19:19.07:0,19,330	0/0:11,0:11:21.63:0,22,175	0/0:18,0:18:40.30:0,40,315	0/0:14,0:14:38.85:0,39,312	0/0:31,0:31:55.48:0,55,571	0/0:41,1:42:69.87:0,70,779	0/0:24,0:24:59.26:0,59,471	0/0:20,0:22:41.55:0,42,410	0/0:20,0:20:35.34:0,35,314	0/1:29,5:35:36.63:37,0,467	0/0:26,0:27:67.90:0,68,542	0/0:26,0:26:59.90:0,60,492	0/0:19,0:19:47.88:0,48,387	0/0:16,0:16:18.91:0,19,152	0/0:18,0:18:19.48:0,19,363	1/1:7,24:31:9.77:687,10,0	0/0:39,0:40:96.64:0,97,759	1/1:1,10:12:29.90:298,30,0
chr10	75349231	.	C	CA	3490.69	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.730;DP=816;FS=5.568;HRun=5;HaplotypeScore=128.4811;InbreedingCoeff=0.9979;MQ=69.82;MQ0=10;MQRankSum=-1.301;QD=30.35;ReadPosRankSum=1.748;VQSLOD=2.3406;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:44.12:0,44,317	0/0:11,0:11:33.08:0,33,355	0/0:80,0:34:56.69:0,57,571	0/0:87,0:35:34.02:0,34,392	0/0:33,0:33:93.23:0,93,998	0/0:29,0:30:83.55:0,84,868	0/0:27,0:27:69.10:0,69,719	0/0:39,0:39:99:0,99,1009	1/1:1,19:20:57.18:713,57,0	0/0:20,0:20:57.14:0,57,612	0/0:22,0:22:63.16:0,63,677	1/1:1,14:15:42.13:532,42,0	1/1:4,16:20:48.67:604,49,0	0/0:15,0:15:36.07:0,36,378	0/0:36,0:36:96.24:0,96,1032	0/0:37,0:37:99:0,111,1172	0/0:26,0:26:72.17:0,72,773	0/0:23,0:23:66.17:0,66,708	0/0:24,0:24:69.16:0,69,731	0/0:35,0:35:93.23:0,93,998	0/0:24,0:24:60.15:0,60,644	1/1:1,24:25:60.15:736,60,0	1/1:1,17:19:38.98:607,39,0	1/1:6,10:15:23.18:300,23,0	0/0:18,0:18:51.13:0,51,548	0/0:33,1:34:84.20:0,84,892	0/0:39,0:39:99:0,114,1200	0/0:11,0:11:18.64:0,19,255
chr10	75349658	.	G	GT	718.65	PASS	AB=0.936;AC=5;AF=0.089;AN=56;BaseQRankSum=-4.072;DP=644;FS=2.204;HRun=9;HaplotypeScore=62.4491;InbreedingCoeff=0.3860;MQ=71.63;MQ0=0;MQRankSum=0.663;QD=8.07;ReadPosRankSum=0.033;VQSLOD=1.3967;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:35:74.87:791,75,0	0/0:12,0:12:32.99:0,33,286	0/1:16,1:16:5.99:6,0,118	0/1:11,0:11:5.32:5,0,37	0/0:30,0:30:80.98:0,81,703	0/0:25,0:25:65.91:0,66,562	0/1:21,4:25:30.55:31,0,452	0/0:36,0:36:77.96:0,78,676	0/0:18,1:19:21.47:0,21,410	0/0:22,0:22:53.97:0,54,463	0/0:28,0:28:71.71:0,72,609	0/0:13,0:13:35.99:0,36,312	0/0:18,0:18:50.96:0,51,436	0/0:16,0:16:38.96:0,39,334	0/0:26,0:26:77.97:0,78,673	0/0:25,1:26:32.80:0,33,514	0/0:29,0:31:73.77:0,74,628	0/0:16,0:16:38.99:0,39,339	0/0:24,1:25:29.80:0,30,484	0/0:27,0:27:65.93:0,66,564	0/0:22,0:22:56.98:0,57,495	0/0:18,2:20:23.80:0,24,433	0/0:17,0:17:44.98:0,45,391	0/0:21,0:23:61.76:0,62,518	0/0:16,0:16:44.99:0,45,390	0/0:35,0:35:89.97:0,90,781	0/0:27,0:27:71.97:0,72,625	0/0:24,0:25:65.02:0,65,552
chr10	75351262	.	A	AT	2401.87	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-7.636;DP=504;FS=4.162;HRun=8;HaplotypeScore=53.7990;InbreedingCoeff=0.9475;MQ=76.38;MQ0=8;MQRankSum=1.334;QD=25.28;ReadPosRankSum=2.271;VQSLOD=4.5799;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:34:84.25:968,84,0	0/0:7,0:7:17.99:0,18,160	0/0:38,0:20:13.50:0,14,255	0/0:27,0:14:6.75:0,7,210	0/0:20,0:20:51:0,51,461	0/0:15,0:15:42.02:0,42,384	0/0:17,0:17:37.57:0,38,333	0/0:30,0:30:81.01:0,81,731	1/1:1,9:11:27.08:310,27,0	0/0:18,0:18:48.01:0,48,434	0/0:14,1:15:4.69:0,5,291	1/1:1,14:16:32.96:361,33,0	1/1:0,8:8:15.04:173,15,0	0/0:13,0:13:30.01:0,30,274	0/0:17,0:17:48.02:0,48,439	0/0:12,0:12:33.02:0,33,302	0/0:24,0:24:69.02:0,69,627	0/0:23,0:22:50.90:0,51,438	0/0:29,0:29:72.03:0,72,656	0/0:12,0:12:36.02:0,36,329	0/0:15,0:15:24:0,24,219	1/1:1,8:9:27.07:300,27,0	1/1:2,5:7:15.04:173,15,0	1/1:0,10:10:27.08:312,27,0	0/0:12,0:12:30.01:0,30,275	0/0:19,0:18:48.01:0,48,435	0/0:32,0:32:81.01:0,81,736	0/0:12,0:11:27:0,27,247
chr10	75352545	.	AT	A	3720.85	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=15.350;DP=627;FS=1.564;HRun=10;HaplotypeScore=71.8015;InbreedingCoeff=0.8865;MQ=73.98;MQ0=0;MQRankSum=-2.145;QD=20.00;ReadPosRankSum=2.430;VQSLOD=4.7005;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:77.96:677,78,0	0/0:12,0:13:31.33:0,31,335	0/0:15,0:15:3.07:0,3,205	0/1:8,0:8:4.33:4,0,95	0/0:22,0:23:56.98:0,57,604	0/0:29,0:29:81.21:0,81,888	0/0:17,1:18:16.06:0,16,405	0/0:38,0:38:81.17:0,81,877	1/1:3,21:24:23.81:436,24,0	0/0:23,0:23:57.14:0,57,619	0/0:31,0:31:81:0,81,865	1/1:3,25:28:74.97:651,75,0	1/1:7,23:30:68.96:599,69,0	0/0:21,0:21:48.13:0,48,531	0/0:31,0:31:90.23:0,90,982	0/0:26,0:26:66.17:0,66,723	0/0:17,0:17:48.12:0,48,523	0/0:13,0:13:36.08:0,36,389	0/0:28,0:29:71.85:0,72,751	0/0:31,0:31:87.22:0,87,954	0/0:12,1:13:7.02:0,7,297	1/1:2,16:18:38.97:339,39,0	1/1:2,19:21:47.99:417,48,0	1/1:1,25:26:68.97:599,69,0	0/0:22,0:22:51.12:0,51,554	0/0:21,0:21:57.15:0,57,631	0/0:17,0:17:45.12:0,45,497	0/0:10,0:10:24.05:0,24,257
chr10	75352712	.	AAATT	A	5639.41	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=15.414;DP=565;FS=1.837;HRun=0;HaplotypeScore=103.7683;InbreedingCoeff=0.9115;MQ=74.68;MQ0=0;MQRankSum=-11.303;QD=36.62;ReadPosRankSum=-0.863;VQSLOD=4.4529;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:75.25:1236,75,0	0/0:8,0:8:24.03:0,24,566	0/0:16,0:16:42.14:0,42,986	0/1:10,0:10:14.02:14,0,228	0/0:19,0:19:57.20:0,57,1460	0/0:16,0:16:48.16:0,48,1248	0/0:18,0:18:48.16:0,48,1241	0/0:37,0:37:99:0,99,2403	1/1:0,11:11:30.10:523,30,0	0/0:21,0:21:63.21:0,63,1572	0/0:21,0:21:57.19:0,57,1433	1/1:0,21:21:45.05:759,45,0	1/1:1,20:21:45.15:781,45,0	0/0:16,0:16:45.15:0,45,1172	0/0:21,0:21:60.21:0,60,1563	0/0:29,0:29:84.28:0,84,2087	0/0:29,0:29:87.30:0,87,2265	0/0:15,0:15:42.14:0,42,1094	0/0:23,0:23:66.23:0,66,1677	0/0:27,0:27:78.27:0,78,1976	0/0:18,0:18:54.16:0,54,1299	1/1:0,22:22:57.15:897,57,0	1/1:2,19:21:57.19:889,57,0	1/1:1,17:18:30.10:541,30,0	0/0:22,0:21:63.19:0,63,1567	0/0:24,0:24:69.22:0,69,1618	0/0:21,0:21:54.19:0,54,1381	0/0:10,0:10:27.09:0,27,663
chr10	75353379	.	G	GGAGGCA	7655.75	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=5.586;DP=626;FS=2.064;HRun=0;HaplotypeScore=133.7951;InbreedingCoeff=0.9841;MQ=77.86;MQ0=0;MQRankSum=-13.782;QD=53.16;ReadPosRankSum=-1.437;VQSLOD=4.9189;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,19:30:45.09:1361,45,0	0/0:4,0:4:9.03:0,9,195	0/0:31,0:30:39.08:0,39,712	0/0:27,0:26:42.22:0,42,829	0/0:27,0:27:66.21:0,66,1341	0/0:20,0:20:51.14:0,51,988	0/0:22,0:22:54.17:0,54,1048	0/0:30,0:30:69.23:0,69,1440	1/1:7,14:21:42.14:1399,42,0	0/0:20,0:20:33.11:0,33,707	0/0:20,0:20:48.15:0,48,950	1/1:5,14:20:45.15:1485,45,0	1/1:7,16:25:51.17:1625,51,0	0/0:19,0:19:48.16:0,48,1041	0/0:30,0:30:78.26:0,78,1641	0/0:28,0:28:69.23:0,69,1459	0/0:28,0:28:81.26:0,81,1690	0/0:18,0:18:54.10:0,54,1044	0/0:16,0:16:33.01:0,33,641	0/0:25,0:25:51.17:0,51,1061	0/0:30,0:30:69.24:0,69,1477	1/1:9,10:19:21.07:706,21,0	1/1:8,7:17:17.81:577,18,0	1/1:3,7:12:15.05:503,15,0	0/0:17,0:17:42.14:0,42,875	0/0:29,0:29:66.22:0,66,1396	0/0:30,0:30:81.26:0,81,1679	0/0:11,0:11:30.08:0,30,609
chr10	75354716	.	TAC	T	4337.69	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=15.931;DP=768;FS=24.711;HRun=0;HaplotypeScore=138.4902;InbreedingCoeff=0.9277;MQ=61.70;MQ0=6;MQRankSum=1.338;QD=19.99;ReadPosRankSum=5.311;VQSLOD=3.4625;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,29:37:65.77:841,66,0	0/0:11,0:11:24.08:0,24,406	0/0:17,0:12:16.88:0,17,163	0/1:19,0:8:5:5,0,49	0/0:39,0:38:98.82:0,99,1421	0/0:22,0:22:57.18:0,57,935	0/0:25,0:25:65.87:0,66,1090	0/0:32,0:32:84.27:0,84,1373	1/1:6,19:25:44.81:551,45,0	0/0:43,0:43:99:0,111,1786	0/0:31,0:31:78.27:0,78,1321	1/1:3,31:34:66.21:858,66,0	1/1:6,24:30:51.13:631,51,0	0/0:26,0:26:75.24:0,75,1247	0/0:21,0:21:60.18:0,60,982	0/0:22,0:22:60.21:0,60,1020	0/0:38,0:38:99:0,111,1827	0/0:35,0:35:97.81:0,98,1568	0/0:17,0:17:45.10:0,45,708	0/0:26,0:26:63.20:0,63,1040	0/0:45,0:45:99:0,126,2129	1/1:2,21:23:48.14:610,48,0	1/1:3,27:29:36.01:468,36,0	1/1:4,15:19:29.98:375,30,0	0/0:13,0:13:33.11:0,33,561	0/0:43,0:43:99:0,114,1841	0/0:33,0:33:96.28:0,96,1551	0/0:11,0:11:30.04:0,30,427
chr10	75354762	.	TACGC	T	5955.52	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.460;DP=749;FS=1.210;HRun=0;HaplotypeScore=164.3159;InbreedingCoeff=0.9981;MQ=63.26;MQ0=3;MQRankSum=-1.504;QD=32.54;ReadPosRankSum=-1.154;VQSLOD=4.4949;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,31:36:63.69:1090,64,0	0/0:7,0:7:21.07:0,21,531	0/0:21,0:16:20.21:0,20,418	0/0:25,0:20:40.35:0,40,638	0/0:31,0:31:63.20:0,63,1540	0/0:21,0:21:54.17:0,54,1278	0/0:34,0:34:81.13:0,81,1942	0/0:40,0:40:84.27:0,84,1923	1/1:3,23:27:72.22:1189,72,0	0/0:40,0:39:99:0,105,2470	0/0:24,0:24:60.15:0,60,1374	1/1:9,20:29:51.15:823,51,0	1/1:10,14:24:48.13:772,48,0	0/0:25,0:25:69.21:0,69,1600	0/0:13,0:13:33.11:0,33,806	0/0:22,0:22:48.14:0,48,1054	0/0:40,0:40:99:0,99,2390	0/0:19,0:19:48.15:0,48,1103	0/0:27,0:27:54.17:0,54,1198	0/0:23,0:23:63.19:0,63,1490	0/0:49,0:49:99:0,120,2658	1/1:6,16:21:39.13:673,39,0	1/1:6,15:20:42.14:713,42,0	1/1:5,19:24:42.98:695,43,0	0/0:11,0:11:27.08:0,27,633	0/0:40,0:40:93.26:0,93,2251	0/0:33,0:33:84.20:0,84,2012	0/0:20,0:20:60.18:0,60,1453
chr10	75357807	.	T	TTGTG	926.64	PASS	AB=1.000;AC=20;AF=0.417;AN=48;BaseQRankSum=0.364;DP=538;FS=12.625;HRun=0;HaplotypeScore=118.8802;InbreedingCoeff=0.5145;MQ=60.11;MQ0=13;MQRankSum=-2.401;QD=3.69;ReadPosRankSum=-1.430;VQSLOD=1.5475;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:26:2.79:0,3,28	0/0:7,0:7:0.47:0,0,1	./.	0/1:20,0:17:0:0,0,0	1/1:21,3:25:3.01:50,3,0	0/0:20,0:22:14.84:0,15,191	0/0:21,0:21:2.88:0,3,45	1/1:43,0:43:3.35:16,3,0	./.	0/0:17,0:17:3.01:0,3,46	0/0:14,0:14:3.01:0,3,40	0/0:9,0:11:7.25:0,7,59	./.	0/0:14,0:13:2.37:0,2,8	0/0:19,0:20:12.03:0,12,165	1/1:22,0:22:3.01:33,3,0	0/1:32,0:34:9.95:10,0,231	0/0:25,0:25:8.03:0,8,85	1/1:23,0:23:13.84:162,14,0	1/1:18,0:18:12.04:211,12,0	1/1:20,0:19:11.78:199,12,0	./.	0/0:8,0:13:9.01:0,9,84	0/0:25,0:26:3:0,3,28	0/0:14,0:15:14.96:0,15,181	1/1:19,0:19:10.86:160,11,0	1/1:10,1:16:9.03:169,9,0	1/1:6,3:11:3.01:70,3,0
chr10	75359550	.	TAAAG	T	1593.51	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=6.809;DP=501;FS=3.307;HRun=0;HaplotypeScore=106.2077;InbreedingCoeff=0.8739;MQ=67.60;MQ0=4;MQRankSum=-3.394;QD=13.74;ReadPosRankSum=3.167;VQSLOD=3.4258;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:14:29.69:349,30,0	0/0:9,0:9:21.01:0,21,284	0/0:23,0:8:12.49:0,12,124	0/1:22,0:11:9.67:10,0,91	0/0:27,0:27:74.65:0,75,1127	0/0:19,0:19:50.13:0,50,869	0/0:23,0:24:59.90:0,60,831	0/0:14,0:14:36.08:0,36,508	1/1:4,9:14:18.05:278,18,0	0/0:16,0:17:39.05:0,39,641	0/0:21,0:21:40.59:0,41,833	1/1:13,0:16:40.12:442,40,0	1/1:0,8:9:7.72:150,8,0	0/0:17,0:17:44.77:0,45,521	0/0:16,0:18:47.60:0,48,656	0/0:24,0:24:66.49:0,66,1067	0/0:26,0:26:52.36:0,52,875	0/0:13,0:13:32.92:0,33,516	0/0:20,0:20:39.96:0,40,539	0/0:17,0:18:50.93:0,51,780	0/0:6,0:6:9.01:0,9,91	1/1:5,1:8:23.89:247,24,0	1/1:6,15:22:11.19:145,11,0	1/1:3,8:11:12:165,12,0	0/0:18,0:18:45.06:0,45,573	0/0:18,0:18:51.07:0,51,669	0/0:31,0:30:80.95:0,81,1140	0/0:21,0:21:60.08:0,60,940
chr10	75359551	.	AAAG	A	1451.57	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=6.850;DP=500;FS=0.000;HRun=0;HaplotypeScore=97.6049;InbreedingCoeff=0.8795;MQ=67.36;MQ0=4;MQRankSum=-4.048;QD=12.41;ReadPosRankSum=1.259;VQSLOD=3.3131;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:30.41:317,30,0	0/0:9,0:9:20.96:0,21,229	0/0:26,1:9:15.36:0,15,131	0/1:24,0:11:4.20:4,0,55	0/0:27,0:27:67.82:0,68,871	0/0:19,0:19:48.53:0,49,673	0/0:23,0:23:40.15:0,40,618	0/0:13,0:13:35.78:0,36,389	1/1:12,1:13:18.05:234,18,0	0/0:18,0:18:35.83:0,36,522	0/0:21,0:21:26.39:0,26,628	1/1:16,0:16:40.25:409,40,0	1/1:9,0:9:8.12:114,8,0	0/0:17,0:17:43.54:0,44,387	0/0:18,0:18:38.73:0,39,477	0/0:24,0:24:50.35:0,50,818	0/0:24,0:24:13.09:0,13,614	0/0:12,0:12:29.66:0,30,383	0/0:20,0:20:25.79:0,26,468	0/0:20,0:20:50.41:0,50,590	0/0:6,0:6:5.34:0,5,52	1/1:3,5:8:23.90:243,24,0	1/1:19,3:22:12.18:170,12,0	1/1:11,0:11:12.04:152,12,0	0/0:18,0:18:44.66:0,45,434	0/0:17,0:17:50.18:0,50,526	0/0:29,0:28:80.30:0,80,882	0/0:21,0:21:59.63:0,60,735
chr10	75359552	.	AAG	A	1375.94	PASS	AB=0.980;AC=18;AF=0.321;AN=56;BaseQRankSum=5.576;DP=496;FS=15.971;HRun=0;HaplotypeScore=87.6200;InbreedingCoeff=0.6075;MQ=67.27;MQ0=4;MQRankSum=-3.069;QD=8.65;ReadPosRankSum=-1.161;VQSLOD=2.0224;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:31.29:284,31,0	0/0:8,0:8:20.18:0,20,173	0/0:28,0:9:14.87:0,15,112	0/0:25,0:11:5.44:0,5,60	0/0:25,0:25:38.17:0,38,620	0/0:18,0:18:35.33:0,35,480	0/0:21,0:21:13.71:0,14,414	0/0:15,0:15:16.48:0,16,308	1/1:13,0:13:18.04:195,18,0	0/1:18,0:18:11.11:11,0,356	0/0:20,1:21:3.47:0,3,435	1/1:16,0:16:43.18:414,43,0	1/1:9,0:9:8.91:98,9,0	0/0:17,0:17:28.35:0,28,263	0/1:19,0:19:15.04:15,0,297	0/0:22,1:23:41.48:0,41,605	0/1:21,2:23:71.30:71,0,402	0/0:11,0:11:24.77:0,25,264	0/0:20,0:20:27.22:0,27,392	0/0:20,0:20:25.94:0,26,377	0/1:6,0:6:16.23:16,0,29	1/1:8,0:8:23.89:212,24,0	1/1:21,0:21:12.75:132,13,0	1/1:11,0:11:12.02:123,12,0	0/0:18,0:18:12.07:0,12,248	0/0:18,0:18:16.47:0,16,368	0/0:29,0:28:69.57:0,70,660	0/0:20,0:20:53.11:0,53,521
chr10	75359554	.	GA	G	33.21	PASS	AB=0.964;AC=16;AF=0.286;AN=56;BaseQRankSum=6.654;DP=526;FS=0.000;HRun=17;HaplotypeScore=93.9357;InbreedingCoeff=0.3421;MQ=67.00;MQ0=5;MQRankSum=-1.455;QD=0.21;ReadPosRankSum=3.864;VQSLOD=-0.7489;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:20.76:21,0,22	0/0:8,0:8:9.09:0,9,56	0/0:34,0:12:11.18:0,11,63	0/0:24,1:11:3.02:0,3,46	0/0:25,2:30:17.04:0,17,295	0/0:18,0:18:37.92:0,38,287	0/0:17,0:20:33.14:0,33,225	0/0:18,0:18:9.09:0,9,158	1/1:14,0:13:7.40:24,7,0	0/0:20,0:21:14.61:0,15,176	0/0:20,2:22:12.32:0,12,287	1/1:15,0:15:8.42:30,8,0	1/1:12,0:12:4.76:15,5,0	0/1:12,0:13:5.40:5,0,69	0/1:15,2:18:34.50:35,0,131	0/0:24,0:24:45.58:0,46,341	0/1:22,0:22:13.90:14,0,238	0/0:10,0:11:12.78:0,13,158	0/0:18,1:20:2.66:0,3,141	0/0:17,2:20:11.01:0,11,233	0/1:6,0:6:1.51:2,0,32	1/1:9,0:9:6.32:19,6,0	0/1:22,0:22:9.40:9,0,9	1/1:12,0:11:7.14:19,7,0	0/0:18,2:21:7.30:0,7,199	0/0:19,0:19:18.61:0,19,195	0/0:33,0:32:49.75:0,50,381	0/0:18,1:20:9.58:0,10,205
chr10	75359584	.	TTTCTTTCTTC	T	912.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.979;DP=554;FS=19.995;HRun=0;HaplotypeScore=175.5733;InbreedingCoeff=0.8574;MQ=71.35;MQ0=4;MQRankSum=-6.013;QD=43.43;ReadPosRankSum=1.123;VQSLOD=2.1563;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,5:21:36.12:1007,36,0	0/0:7,0:7:18.06:0,18,852	0/0:55,0:30:51.16:0,51,1738	0/0:46,0:23:20.06:0,20,1341	0/0:19,0:19:48.15:0,48,2161	0/0:20,0:20:48.16:0,48,2217	0/0:20,0:20:42.13:0,42,1825	0/0:33,0:33:63.20:0,63,2823	0/0:12,0:12:18.06:0,18,916	0/0:19,0:19:45.15:0,45,2186	0/0:21,0:21:51.18:0,51,2218	0/0:11,0:10:15.05:0,15,721	0/0:12,0:12:21.07:0,21,1068	0/0:15,0:15:27.09:0,27,1206	0/0:20,0:20:42.14:0,42,2008	0/0:22,0:22:57.20:0,57,2750	0/0:22,0:22:45.15:0,45,2146	0/0:9,0:9:18.06:0,18,802	0/0:22,0:22:39.13:0,39,1504	0/0:26,0:26:42.14:0,42,1945	0/0:3,0:3:6.02:0,6,305	0/0:9,0:9:21.07:0,21,1011	0/0:11,0:11:21.07:0,21,896	0/0:14,0:14:24.08:0,24,1119	0/0:25,0:25:48.16:0,48,2224	0/0:21,0:21:42.14:0,42,2055	0/0:18,0:18:33.11:0,33,1642	0/0:18,0:18:42.14:0,42,2026
chr10	75359600	.	T	TTC	444.52	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.204;DP=507;FS=21.036;HRun=0;HaplotypeScore=76.0505;InbreedingCoeff=0.5362;MQ=63.16;MQ0=6;MQRankSum=-5.390;QD=29.63;ReadPosRankSum=1.420;VQSLOD=3.2996;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,5:15:2.20:521,2,0	0/0:6,0:6:18.06:0,18,294	0/0:39,0:26:66.17:0,66,958	0/0:48,0:24:0.19:0,0,671	0/0:19,0:19:57.17:0,57,876	0/0:22,0:22:63.18:0,63,977	0/0:19,0:19:54.09:0,54,801	0/0:27,0:27:78.25:0,78,1229	0/0:9,0:9:24.08:0,24,391	0/0:18,0:18:54.18:0,54,879	0/0:22,0:22:66.21:0,66,1027	0/0:10,0:10:30.10:0,30,481	0/0:11,0:11:30.10:0,30,489	0/0:14,0:14:39.13:0,39,636	0/0:18,0:18:48.15:0,48,760	0/0:21,0:21:63.20:0,63,1002	0/0:16,0:16:48.06:0,48,749	0/0:11,0:11:33.05:0,33,478	0/0:17,0:17:48.15:0,48,739	0/0:20,0:20:60.19:0,60,954	0/0:4,0:3:9.03:0,9,147	0/0:11,0:11:33.10:0,33,509	0/0:14,0:14:33.11:0,33,536	0/0:18,0:18:26.20:0,26,632	0/0:25,0:25:72.21:0,72,1120	0/0:18,0:18:48.16:0,48,762	0/0:17,0:17:48.15:0,48,753	0/0:15,0:15:42.14:0,42,685
chr10	75360244	.	CTTTTCT	C	144.45	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=4.072;DP=533;FS=5.655;HRun=0;HaplotypeScore=106.5990;InbreedingCoeff=0.2990;MQ=62.48;MQ0=9;MQRankSum=-0.030;QD=2.37;ReadPosRankSum=-1.889;VQSLOD=1.3474;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,29:34:2.63:212,3,0	0/0:7,0:7:0.02:0,0,252	0/0:17,0:6:7.40:0,7,194	0/1:26,0:11:23.04:23,0,115	0/0:23,0:23:66.85:0,67,1034	0/0:19,0:19:51.39:0,51,686	0/0:14,0:14:36.08:0,36,815	0/0:29,0:29:71.34:0,71,1065	0/0:16,0:16:30.14:0,30,539	0/0:17,0:17:39.33:0,39,776	0/0:26,0:27:68.99:0,69,1435	0/0:14,0:14:27.07:0,27,547	0/0:14,0:14:42.12:0,42,833	0/0:18,0:16:47.65:0,48,1123	0/0:21,0:21:39.06:0,39,1004	0/0:23,0:23:63.63:0,64,1288	0/0:19,0:17:45.56:0,46,949	0/0:18,0:18:45.05:0,45,954	0/0:17,0:17:46.27:0,46,670	0/0:25,0:25:63.88:0,64,1271	0/0:8,0:9:1.39:0,1,304	0/0:24,0:23:54.01:0,54,816	0/0:11,0:11:30.05:0,30,556	0/0:17,0:17:33.11:0,33,750	0/0:21,0:21:47.51:0,48,777	0/0:22,0:22:48.99:0,49,1097	0/0:23,0:22:53.99:0,54,1128	0/0:7,0:7:16.86:0,17,421
chr10	75364112	.	GA	G	1024.95	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.601;DP=663;FS=7.363;HRun=10;HaplotypeScore=64.2130;InbreedingCoeff=0.8532;MQ=60.35;MQ0=11;MQRankSum=0.202;QD=17.98;ReadPosRankSum=2.103;VQSLOD=4.3830;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,52:57:99:1120,129,0	0/0:8,0:9:20.89:0,21,213	0/0:15,0:10:4.26:0,4,248	0/0:8,0:6:17.78:0,18,149	0/0:38,1:39:82.22:0,82,1126	0/0:24,0:23:66.18:0,66,729	0/0:35,0:35:89.25:0,89,959	0/0:27,0:25:56.72:0,57,589	0/0:17,0:17:45.12:0,45,498	0/0:22,0:21:57.15:0,57,630	0/0:21,1:20:28.10:0,28,538	0/0:29,0:29:75.20:0,75,826	0/0:15,1:16:16.06:0,16,405	0/0:21,0:22:62.98:0,63,661	0/0:29,0:29:52.23:0,52,794	0/0:25,0:25:72.19:0,72,797	0/0:27,0:28:68.98:0,69,731	0/0:24,0:24:63.17:0,63,697	0/0:16,0:15:45.12:0,45,497	0/0:23,0:23:57.11:0,57,617	0/0:19,0:19:32.07:0,32,452	0/0:14,0:14:39.11:0,39,431	0/0:16,0:14:33.09:0,33,365	0/0:34,0:34:84.18:0,84,911	0/0:21,1:22:25.08:0,25,505	0/0:29,0:29:81.04:0,81,868	0/0:24,0:23:57.10:0,57,615	0/0:15,0:13:38.94:0,39,412
chr10	75364990	.	T	TA	513.07	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.846;DP=538;FS=0.000;HRun=8;HaplotypeScore=68.7669;InbreedingCoeff=0.9603;MQ=75.45;MQ0=0;MQRankSum=-3.026;QD=23.32;ReadPosRankSum=-3.090;VQSLOD=2.9546;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,17:22:59.82:608,60,0	0/0:4,0:4:12.01:0,12,110	0/0:16,0:16:25.59:0,26,255	0/0:13,0:13:26.60:0,27,226	0/0:22,0:22:54.03:0,54,494	0/0:23,0:23:68.98:0,69,619	0/0:13,0:13:27:0,27,247	0/0:30,0:30:84.04:0,84,765	0/0:15,0:15:45.02:0,45,409	0/0:23,0:23:63.03:0,63,576	0/0:14,0:14:33.01:0,33,302	0/0:23,0:23:47.98:0,48,429	0/0:19,0:19:48:0,48,434	0/0:14,0:14:39:0,39,352	0/0:23,0:23:63.03:0,63,577	0/0:23,0:23:63.01:0,63,572	0/0:15,0:15:39.02:0,39,357	0/0:25,0:25:59.83:0,60,529	0/0:20,0:20:57.03:0,57,522	0/0:24,0:24:53.89:0,54,476	0/0:22,0:22:63.03:0,63,576	0/0:9,0:9:21:0,21,192	0/0:23,0:23:44.53:0,45,392	0/0:20,0:20:45:0,45,407	0/0:13,0:13:33.02:0,33,302	0/0:24,0:24:54:0,54,494	0/0:37,0:37:87.03:0,87,796	0/0:9,0:9:24.01:0,24,220
chr10	75365015	.	T	TAA	2914.90	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-4.636;DP=548;FS=4.933;HRun=9;HaplotypeScore=70.0725;InbreedingCoeff=0.9906;MQ=71.38;MQ0=0;MQRankSum=-0.501;QD=22.95;ReadPosRankSum=1.100;VQSLOD=3.0471;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:22:36.20:159,36,0	0/0:6,0:6:15.02:0,15,160	0/0:12,0:12:23.83:0,24,243	0/0:11,0:10:15.03:0,15,159	0/0:28,0:28:75.16:0,75,790	0/0:29,0:29:81.18:0,81,861	0/0:14,0:14:36.08:0,36,383	0/0:32,0:32:66.11:0,66,696	1/1:5,19:24:51.13:784,51,0	0/0:24,0:24:48.06:0,48,511	0/0:16,0:16:42.09:0,42,447	1/1:1,15:17:20.83:450,21,0	1/1:6,11:19:36.04:492,36,0	0/0:16,0:16:48.12:0,48,511	0/0:26,0:26:72.08:0,72,751	0/0:20,0:20:45.05:0,45,478	0/0:11,0:11:33.08:0,33,351	0/0:23,0:23:57.12:0,57,599	0/0:19,0:20:47.85:0,48,491	0/0:25,0:27:57.11:0,57,606	0/0:22,0:22:57.10:0,57,595	1/1:2,8:10:24.08:368,24,0	1/1:1,17:20:32.95:491,33,0	1/1:3,11:15:24.08:370,24,0	0/0:15,0:15:36.07:0,36,382	0/0:26,0:26:72.12:0,72,751	0/0:36,0:36:99:0,99,1054	0/0:7,0:7:18.04:0,18,192
chr10	75365706	.	GAC	G	284.31	PASS	AC=2;AF=0.040;AN=50;BaseQRankSum=4.091;DP=376;FS=5.172;HRun=0;HaplotypeScore=30.9432;InbreedingCoeff=0.4994;MQ=41.31;MQ0=85;MQRankSum=-0.770;QD=14.96;ReadPosRankSum=-0.283;VQSLOD=2.5436;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,15:13:27.09:377,27,0	0/0:4,0:3:6.02:0,6,108	0/0:9,0:1:3.01:0,3,54	./.	./.	0/0:22,0:18:45.15:0,45,810	0/0:13,0:9:15.05:0,15,269	0/0:31,0:23:63.22:0,63,1126	0/0:10,0:7:21.07:0,21,378	0/0:4,0:3:9.03:0,9,162	0/0:12,0:10:21.07:0,21,366	0/0:11,0:9:21.07:0,21,369	0/0:11,0:8:21.07:0,21,377	0/0:7,0:7:15.05:0,15,270	0/0:23,0:21:45.15:0,45,806	0/0:10,0:9:12.04:0,12,216	0/0:28,0:19:33.11:0,33,594	0/0:35,0:26:51.17:0,51,918	0/0:24,0:19:57.20:0,57,1021	0/0:6,0:4:9.03:0,9,162	0/0:10,0:6:9.03:0,9,162	./.	0/0:6,0:2:3.01:0,3,54	0/0:9,0:6:6.02:0,6,108	0/0:7,0:5:9.03:0,9,162	0/0:15,0:14:39.10:0,39,655	0/0:18,0:15:36.12:0,36,647	0/0:16,0:8:12.04:0,12,214
chr10	75366054	.	TA	T	769.85	PASS	AB=0.842;AC=15;AF=0.268;AN=56;BaseQRankSum=5.671;DP=441;FS=0.541;HRun=15;HaplotypeScore=52.5640;InbreedingCoeff=0.6947;MQ=55.94;MQ0=13;MQRankSum=2.074;QD=6.36;ReadPosRankSum=1.497;VQSLOD=2.2854;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,23:30:46.25:294,46,0	0/0:3,0:3:6:0,6,53	0/0:17,0:7:14.69:0,15,97	0/1:8,0:3:5.29:6,0,5	0/0:18,0:18:23.45:0,23,316	0/0:19,0:19:41.86:0,42,356	0/0:16,0:14:29.97:0,30,256	0/0:23,2:25:12.11:0,12,322	1/1:3,13:16:32.48:211,32,0	0/0:19,0:20:44.12:0,44,404	0/0:16,0:16:17.22:0,17,139	1/1:7,10:16:17.61:113,18,0	0/1:9,8:17:2.82:110,0,3	0/0:8,0:8:20.94:0,21,174	0/0:16,1:18:22.56:0,23,309	0/0:13,1:14:10.72:0,11,214	0/0:22,2:24:28.73:0,29,376	0/0:27,2:31:24.06:0,24,429	0/0:15,0:16:32.78:0,33,270	0/1:9,2:10:20.55:21,0,84	0/0:7,0:6:11.87:0,12,94	1/1:4,2:6:5.85:38,6,0	1/1:1,7:8:17.72:115,18,0	1/1:1,3:5:7.94:44,8,0	0/0:8,0:8:12:0,12,106	0/0:22,2:24:28.53:0,29,354	0/0:20,0:19:44.96:0,45,384	0/0:9,1:9:4.53:0,5,144
chr10	75366745	.	CA	C	3565.83	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=10.900;DP=530;FS=0.436;HRun=1;HaplotypeScore=57.5924;InbreedingCoeff=0.9052;MQ=68.43;MQ0=0;MQRankSum=-0.781;QD=32.12;ReadPosRankSum=1.982;VQSLOD=3.3163;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,2033	0/0:6,0:6:18.03:0,18,242	0/1:12,0:11:7.25:7,0,251	0/0:8,0:7:11.09:0,11,229	0/0:26,0:26:75.23:0,75,1170	0/0:22,0:22:66.21:0,66,1032	0/0:18,0:18:54.17:0,54,837	0/0:21,0:21:63.21:0,63,988	1/1:0,11:11:30.10:418,30,0	0/0:22,0:22:66.21:0,66,999	0/0:18,0:18:50.93:0,51,789	1/1:0,15:15:39.09:544,39,0	1/1:0,21:21:60.20:837,60,0	0/0:13,0:13:39.10:0,39,560	0/0:20,0:20:60.19:0,60,934	0/0:20,0:20:60.19:0,60,937	0/0:28,0:28:84.22:0,84,1239	0/0:18,0:18:54.14:0,54,830	0/0:22,0:22:63.21:0,63,1007	0/0:19,0:19:54.16:0,54,817	0/0:31,0:31:93.26:0,93,1385	1/1:0,10:10:24.08:335,24,0	1/1:0,15:15:33.11:460,33,0	1/1:0,27:27:69.23:964,69,0	0/0:18,0:18:54.12:0,54,811	0/0:20,0:20:60.20:0,60,959	0/0:17,0:17:51.16:0,51,792	0/0:7,0:7:21.07:0,21,336
chr10	75367149	.	AGAGAGAGAGG	A	1467.06	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=3.703;DP=535;FS=27.343;HRun=0;HaplotypeScore=127.9959;InbreedingCoeff=0.7974;MQ=57.23;MQ0=17;MQRankSum=-1.065;QD=12.23;ReadPosRankSum=4.154;VQSLOD=0.5719;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:99:104,0,118	0/0:6,0:6:11.94:0,12,214	0/0:16,0:6:11.19:0,11,139	0/0:36,0:12:19.66:0,20,196	0/0:18,0:18:29.86:0,30,293	0/0:27,0:27:63.02:0,63,747	0/0:20,0:20:39.42:0,39,655	0/0:37,0:36:95.72:0,96,843	1/1:3,11:14:6.02:191,6,0	0/0:21,0:20:51.36:0,51,697	0/0:13,0:13:33.01:0,33,352	1/1:6,14:20:12.04:377,12,0	1/1:2,9:11:6.02:198,6,0	0/0:25,0:24:51.56:0,52,1162	0/0:20,0:20:57.02:0,57,810	0/0:24,0:24:59.17:0,59,1098	0/0:16,0:16:34.34:0,34,726	0/0:18,0:18:41.98:0,42,510	0/0:10,0:9:27.04:0,27,462	0/0:13,0:13:33:0,33,325	0/0:26,0:25:58.23:0,58,663	1/1:14,0:14:26.95:222,27,0	1/1:19,0:19:20.75:456,21,0	1/1:8,15:20:3.01:92,3,0	0/0:16,0:16:35.98:0,36,369	0/0:22,0:22:55.41:0,55,847	0/0:17,0:16:38.69:0,39,710	0/0:14,0:12:35.96:0,36,304
chr10	75367753	.	CT	C	340.23	PASS	AB=0.810;AC=15;AF=0.268;AN=56;BaseQRankSum=1.677;DP=437;FS=0.536;HRun=15;HaplotypeScore=65.7206;InbreedingCoeff=0.4217;MQ=61.88;MQ0=15;MQRankSum=1.063;QD=3.07;ReadPosRankSum=2.499;VQSLOD=-0.4886;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:24:45.14:0,45,260	0/0:8,0:8:8.97:0,9,72	0/0:24,0:11:18.24:0,18,129	0/0:14,1:8:2.21:0,2,17	0/0:14,3:19:4.06:0,4,142	0/0:14,1:16:19.57:0,20,280	0/0:13,1:14:4.23:0,4,128	0/0:25,0:25:4.86:0,5,225	1/1:6,4:9:6.70:40,7,0	0/0:20,1:20:7.75:0,8,210	0/0:7,0:7:15.41:0,15,120	1/1:3,3:8:12.91:69,13,0	1/1:2,5:9:14.42:75,14,0	0/1:11,0:10:1.94:2,0,62	0/0:22,1:24:8.99:0,9,322	0/0:14,1:16:8.42:0,8,162	0/0:24,1:26:19.49:0,19,305	0/0:19,2:20:9.43:0,9,323	0/1:17,2:21:7.63:8,0,198	0/1:5,1:5:13.27:13,0,20	0/0:14,0:13:23.37:0,23,192	0/1:3,7:10:6.48:92,0,6	1/1:5,7:11:17.67:114,18,0	1/1:8,1:9:6.54:29,7,0	0/0:9,0:9:14.98:0,15,128	0/0:21,1:22:11.88:0,12,200	0/0:17,1:19:15.69:0,16,241	0/1:9,4:12:65.37:65,0,103
chr10	75368057	.	T	TTAA	926.49	PASS	AC=14;AF=0.412;AN=34;BaseQRankSum=0.891;DP=163;FS=3.741;HRun=0;HaplotypeScore=24.9515;InbreedingCoeff=0.6578;MQ=69.22;MQ0=1;MQRankSum=0.666;QD=18.17;ReadPosRankSum=0.708;VQSLOD=2.3824;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:1.26:0,1,2	0/0:3,0:3:6.01:0,6,65	./.	./.	0/0:2,0:2:5.93:0,6,40	0/0:8,0:8:6.02:0,6,81	0/0:3,0:3:6.02:0,6,81	0/0:26,0:26:42.04:0,42,475	./.	./.	0/0:2,0:2:3:0,3,27	1/1:2,0:2:2.21:26,2,0	./.	./.	./.	0/0:5,0:5:6.02:0,6,81	0/0:18,0:18:39.10:0,39,509	1/1:4,9:13:6.02:117,6,0	1/1:5,2:7:6.02:117,6,0	1/1:1,2:3:6.02:117,6,0	./.	./.	./.	./.	0/0:9,0:9:12.04:0,12,163	1/1:7,0:7:12.03:201,12,0	1/1:8,0:8:9.02:108,9,0	1/1:11,0:11:21.05:375,21,0
chr10	75368107	.	GATAATA	G	483.11	PASS	AC=14;AF=0.318;AN=44;BaseQRankSum=4.168;DP=171;FS=0.000;HRun=0;HaplotypeScore=48.8227;InbreedingCoeff=0.6318;MQ=65.55;MQ0=1;MQRankSum=-0.671;QD=16.10;ReadPosRankSum=0.790;VQSLOD=2.3258;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:8.86:0,9,57	0/0:4,0:4:9:0,9,147	./.	./.	1/1:1,3:4:5.95:68,6,0	0/0:2,0:3:2.94:0,3,18	0/0:2,0:2:3:0,3,28	0/0:38,0:37:35.13:0,35,271	./.	1/1:0,4:4:12.04:234,12,0	1/1:2,4:6:9.03:109,9,0	1/1:3,0:3:5.97:57,6,0	1/1:2,0:2:2.88:15,3,0	0/0:1,0:1:3.01:0,3,97	0/0:2,0:2:6.02:0,6,193	1/1:1,2:3:6.02:117,6,0	0/0:15,0:18:35.95:0,36,819	0/0:16,0:17:32.87:0,33,773	0/0:8,0:8:9.03:0,9,291	0/0:4,0:4:6.02:0,6,192	0/0:2,0:2:5.99:0,6,49	./.	./.	./.	1/1:3,5:8:3.01:31,3,0	0/0:6,0:6:9.02:0,9,220	0/0:4,0:4:9.03:0,9,281	0/0:18,0:19:48.05:0,48,1060
chr10	75368181	.	GTACCATGTAGCCGTTC	G	2306.54	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=6.895;DP=328;FS=2.394;HRun=0;HaplotypeScore=137.3295;InbreedingCoeff=0.8762;MQ=85.67;MQ0=0;MQRankSum=-6.898;QD=82.38;ReadPosRankSum=1.988;VQSLOD=3.7560;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:36.12:0,36,2770	0/0:4,0:4:12.04:0,12,958	0/0:13,0:13:36.08:0,36,1938	0/0:10,0:10:23.95:0,24,1336	0/0:11,0:11:30.10:0,30,2291	0/0:9,0:8:24.08:0,24,1836	0/0:9,0:9:27.09:0,27,2126	0/0:31,0:31:90.31:0,90,5622	1/1:0,7:7:18.06:807,18,0	0/0:13,0:13:39.13:0,39,2843	0/0:6,0:6:12.04:0,12,947	1/1:0,8:8:21.07:934,21,0	1/1:0,5:5:6.02:287,6,0	0/0:13,0:13:39.13:0,39,3086	0/0:16,0:16:48.16:0,48,3674	0/0:9,0:9:27.09:0,27,1955	0/0:32,0:32:90.29:0,90,6791	0/0:23,0:23:66.23:0,66,4768	0/0:11,0:11:30.10:0,30,2100	0/0:6,0:6:18.06:0,18,1345	0/0:26,0:26:72.23:0,72,5508	1/1:0,5:5:6.02:287,6,0	1/1:0,3:3:3.01:144,3,0	./.	0/0:6,0:6:12.04:0,12,960	0/0:9,0:9:27.09:0,27,1868	0/0:10,0:10:30.10:0,30,2258	0/0:15,0:15:45.15:0,45,3367
chr10	75369415	.	TGTGC	T	1919.09	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.244;DP=971;FS=8.471;HRun=0;HaplotypeScore=167.9641;InbreedingCoeff=0.9842;MQ=67.35;MQ0=0;MQRankSum=-4.753;QD=34.89;ReadPosRankSum=1.237;VQSLOD=3.2877;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,54:55:99:2014,114,0	0/0:11,0:11:33.09:0,33,743	0/0:34,0:34:99:0,102,2526	0/0:33,0:33:90.16:0,90,2124	0/0:35,0:35:96.33:0,96,2514	0/0:33,0:33:96.31:0,96,2464	0/0:40,0:40:99:0,105,2759	0/0:37,0:37:93.31:0,93,2313	0/0:41,0:41:99:0,117,3044	0/0:34,0:34:99:0,102,2522	0/0:17,0:17:51.15:0,51,1240	0/0:36,0:36:99:0,108,2802	0/0:29,0:29:87.28:0,87,2245	0/0:38,0:38:99:0,111,2925	0/0:43,0:43:99:0,126,3271	0/0:48,0:48:99:0,138,3544	0/0:31,0:31:90.25:0,90,2281	0/0:19,0:19:45.13:0,45,1113	0/0:27,0:27:78.27:0,78,2009	0/0:35,0:35:96.30:0,96,2291	0/0:79,0:79:99:0,226,5783	0/0:38,0:38:99:0,108,2680	0/0:43,0:43:99:0,117,2864	0/0:34,0:33:99:0,99,2634	0/0:23,0:23:69.24:0,69,1845	0/0:35,0:35:99:0,99,2566	0/0:38,0:38:88.37:0,88,2682	0/0:5,0:5:15.03:0,15,345
chr10	75370292	.	AAGAAAGAAAGAAAGAG	A	2731.38	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.254;DP=644;FS=8.210;HRun=0;HaplotypeScore=259.0713;InbreedingCoeff=0.9507;MQ=55.73;MQ0=4;MQRankSum=-4.369;QD=22.76;ReadPosRankSum=0.777;VQSLOD=0.6627;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,117,4806	0/0:9,0:9:24.08:0,24,1666	0/0:15,0:8:17.99:0,18,370	0/0:12,0:5:12.01:0,12,293	0/0:28,0:28:69.24:0,69,3939	0/0:20,0:20:51.17:0,51,2907	0/0:30,0:30:69.22:0,69,3530	0/0:26,0:24:57.15:0,57,2235	1/1:7,8:15:6.02:271,6,0	0/0:27,0:27:69.24:0,69,4166	0/0:19,0:19:54.18:0,54,3024	1/1:6,13:19:15.94:678,16,0	1/1:3,17:20:18.01:812,18,0	0/0:18,0:18:30.10:0,30,1698	0/0:29,0:29:81.26:0,81,4690	0/0:30,0:30:78.25:0,78,4377	0/0:26,0:26:72.25:0,72,4513	0/0:29,0:29:78.10:0,78,4808	0/0:18,0:16:39.10:0,39,1974	0/0:24,0:24:63.20:0,63,3549	0/0:18,0:18:45.15:0,45,2327	1/1:4,10:14:26.92:418,27,0	1/1:7,18:25:16.23:379,16,0	1/1:4,23:27:9.03:352,9,0	0/0:19,0:19:54.18:0,54,3095	0/0:28,0:28:66.23:0,66,3189	0/0:31,0:31:84.29:0,84,4734	0/0:14,0:14:39.13:0,39,2629
chr10	75371095	.	AAAAT	A	4068.74	PASS	AB=0.947;AC=13;AF=0.232;AN=56;BaseQRankSum=12.540;DP=608;FS=0.000;HRun=0;HaplotypeScore=96.6089;InbreedingCoeff=0.8934;MQ=57.32;MQ0=11;MQRankSum=-1.235;QD=30.82;ReadPosRankSum=4.595;VQSLOD=3.3939;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.25:0,78,1876	0/0:6,0:6:18.06:0,18,414	0/0:11,0:3:9.03:0,9,203	0/0:4,1:3:9.03:0,9,217	0/0:26,0:26:63.20:0,63,1541	0/0:11,0:11:30.10:0,30,736	0/0:12,0:12:30.09:0,30,677	0/0:33,0:29:69.24:0,69,1729	1/1:3,16:19:42.14:726,42,0	0/0:37,0:37:94.20:0,94,2263	0/0:22,0:22:60.21:0,60,1463	1/1:0,22:22:57.20:985,57,0	1/1:1,12:12:27.09:466,27,0	0/0:25,0:25:66.23:0,66,1598	0/0:26,0:26:60.21:0,60,1489	0/1:17,1:18:6.69:7,0,1017	0/0:35,0:34:78.25:0,78,1836	0/0:20,0:20:51.13:0,51,1187	0/0:17,0:16:39.13:0,39,983	0/0:25,0:25:66.23:0,66,1609	0/0:13,0:12:30.10:0,30,744	1/1:3,14:17:33.07:538,33,0	1/1:2,23:25:41.84:725,42,0	1/1:2,16:18:36.12:622,36,0	0/0:27,0:27:75.26:0,75,1882	0/0:32,0:32:75.26:0,75,1853	0/0:32,0:31:75.26:0,75,1854	0/0:33,0:33:78.27:0,78,1949
chr10	75372203	.	CACGCAT	C	2363.51	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.540;DP=736;FS=2.465;HRun=0;HaplotypeScore=177.4513;InbreedingCoeff=0.9896;MQ=55.21;MQ0=18;MQRankSum=-3.936;QD=16.41;ReadPosRankSum=-0.620;VQSLOD=3.3981;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,8:38:47.97:521,48,0	0/0:12,0:12:36:0,36,557	0/0:29,0:10:13.18:0,13,183	0/0:32,0:17:30.72:0,31,241	0/0:26,0:26:65.85:0,66,1064	0/0:18,0:17:39.06:0,39,791	0/0:27,0:27:69.08:0,69,1386	0/0:34,0:34:93.03:0,93,928	1/1:19,0:19:41.86:356,42,0	0/0:34,0:34:90.39:0,90,1626	0/0:20,0:20:60.04:0,60,1285	1/1:24,0:24:56.86:578,57,0	1/1:21,0:21:41.65:457,42,0	0/0:29,0:29:84.17:0,84,1845	0/0:31,0:31:90.09:0,90,1804	0/0:25,0:25:71.29:0,71,1330	0/0:38,0:38:99:0,102,1920	0/0:35,0:35:96.09:0,96,2013	0/0:27,0:25:68.68:0,69,981	0/0:22,0:22:51.07:0,51,1177	0/0:54,0:54:99:0,138,2517	1/1:10,0:10:14.99:132,15,0	1/1:6,0:6:14.98:126,15,0	1/1:25,0:24:42.39:390,42,0	0/0:27,0:27:72.05:0,72,1088	0/0:28,0:27:74.83:0,75,1261	0/0:25,0:25:70.25:0,70,1458	0/0:19,0:19:57.04:0,57,1219
chr10	75372205	.	CGCAT	C	1126.31	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=12.974;DP=735;FS=4.845;HRun=0;HaplotypeScore=153.4967;InbreedingCoeff=0.8763;MQ=54.34;MQ0=18;MQRankSum=-0.959;QD=8.05;ReadPosRankSum=-1.294;VQSLOD=2.6635;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:36:99:130,0,113	0/0:12,0:12:36.12:0,36,787	0/0:29,0:10:30.05:0,30,480	0/0:30,0:15:44.73:0,45,667	0/0:26,0:26:69.23:0,69,1392	0/0:16,0:15:42.13:0,42,937	0/0:27,0:27:72.22:0,72,1572	0/0:35,0:35:99:0,105,1825	1/1:18,1:19:27.96:203,28,0	0/0:32,0:32:93.78:0,94,2021	0/0:20,0:20:60.20:0,60,1317	1/1:21,2:23:43.27:376,43,0	1/1:20,0:20:13.71:265,14,0	0/0:28,0:28:84.29:0,84,1934	0/0:31,0:31:67.48:0,67,1994	0/0:25,0:25:72.25:0,72,1664	0/0:40,0:40:99:0,108,2278	0/0:35,0:35:99:0,99,2267	0/0:26,0:24:46.26:0,46,1217	0/0:22,0:22:32.20:0,32,1192	0/0:58,0:58:99:0,137,3023	1/1:10,0:10:14.11:102,14,0	1/1:4,1:5:7.99:43,8,0	1/1:25,1:25:27.88:192,28,0	0/0:26,0:26:75.24:0,75,1398	0/0:32,0:31:90.14:0,90,1859	0/0:26,0:26:69.66:0,70,1536	0/0:19,0:19:57.15:0,57,1270
chr10	75372238	.	ACACGCACACG	A	2796.36	PASS	AB=0.995;AC=10;AF=0.179;AN=56;BaseQRankSum=10.569;DP=734;FS=1.442;HRun=0;HaplotypeScore=225.3016;InbreedingCoeff=0.2733;MQ=56.19;MQ0=15;MQRankSum=0.241;QD=15.45;ReadPosRankSum=-2.853;VQSLOD=2.3353;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,8:27:45.13:862,45,0	0/0:8,0:8:24.05:0,24,812	0/0:29,0:1:2.37:0,2,8	0/1:29,0:5:3.89:4,0,157	0/0:28,0:28:81.25:0,81,2524	0/0:20,0:20:57.19:0,57,1846	0/0:32,0:32:87.30:0,87,2942	0/0:22,0:22:52.91:0,53,1207	0/1:22,0:22:99:345,0,205	0/0:28,0:28:81.28:0,81,2938	0/0:24,0:24:66.23:0,66,2628	0/1:32,0:32:99:534,0,172	0/1:23,0:23:99:513,0,104	0/0:34,0:34:93.32:0,93,3689	0/0:29,0:29:84.25:0,84,3028	0/0:22,0:22:63.20:0,63,2151	0/0:36,0:36:84.29:0,84,3377	0/0:28,0:28:81.28:0,81,3243	0/0:33,0:30:82.13:0,82,2264	0/0:20,0:20:54.18:0,54,2193	0/0:67,0:67:99:0,190,6813	0/1:10,0:10:33.97:70,0,34	1/1:7,0:7:17.08:206,17,0	0/1:30,0:29:64.03:414,0,64	0/0:23,0:23:63.20:0,63,2244	0/0:28,0:27:81.23:0,81,2851	0/0:23,0:23:64.65:0,65,2584	0/0:19,0:19:48.09:0,48,1977
chr10	75372242	.	GCA	G	809.18	PASS	AB=0.778;AC=13;AF=0.232;AN=56;BaseQRankSum=14.907;DP=717;FS=3.857;HRun=0;HaplotypeScore=124.5887;InbreedingCoeff=0.9042;MQ=56.62;MQ0=9;MQRankSum=0.751;QD=5.50;ReadPosRankSum=-1.644;VQSLOD=2.9109;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:24.24:91,24,0	0/0:8,0:8:18.06:0,18,328	0/0:31,0:3:8.02:0,8,57	0/0:25,0:5:11.21:0,11,107	0/0:29,0:29:81.28:0,81,1456	0/0:19,0:19:54.17:0,54,949	0/0:31,0:31:90.31:0,90,1602	0/0:21,0:21:50.52:0,51,838	0/1:15,6:21:2.41:133,0,2	0/0:27,0:27:81.28:0,81,1473	0/0:25,0:25:72.21:0,72,1264	1/1:21,8:29:37.02:270,37,0	1/1:15,7:22:36.49:244,36,0	0/0:31,0:31:93.30:0,93,1654	0/0:28,0:28:78.25:0,78,1377	0/0:23,0:23:60.15:0,60,971	0/0:34,0:34:87.30:0,87,1547	0/0:27,0:27:75.24:0,75,1327	0/0:32,0:30:82.70:0,83,1355	0/0:21,0:21:57.19:0,57,1016	0/0:71,0:71:99:0,202,3495	1/1:5,5:10:12.20:64,12,0	1/1:8,0:8:11.93:35,12,0	1/1:25,5:29:31.30:158,31,0	0/0:22,0:22:63.22:0,63,1123	0/0:27,0:27:75.26:0,75,1365	0/0:21,0:21:63.22:0,63,1128	0/0:17,0:17:39.13:0,39,714
chr10	75372244	.	ACACG	A	4062.28	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=12.379;DP=724;FS=4.288;HRun=0;HaplotypeScore=140.7469;InbreedingCoeff=0.9149;MQ=56.87;MQ0=8;MQRankSum=-3.014;QD=23.35;ReadPosRankSum=-0.748;VQSLOD=3.3431;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,6:28:45.15:735,45,0	0/0:7,0:7:18.06:0,18,429	0/0:30,0:3:7.42:0,7,57	0/1:24,0:5:4.49:4,0,102	0/0:29,0:29:84.28:0,84,1660	0/0:19,0:19:51.17:0,51,1069	0/0:31,0:31:84.29:0,84,1724	0/0:23,0:23:51.16:0,51,861	1/1:21,0:21:44.59:579,45,0	0/0:28,0:28:84.29:0,84,1812	0/0:26,0:26:72.25:0,72,1583	1/1:30,0:30:65.85:893,66,0	1/1:22,0:22:37.43:731,37,0	0/0:32,0:32:93.32:0,93,2173	0/0:28,0:28:78.25:0,78,1650	0/0:22,0:22:51.17:0,51,1082	0/0:35,0:35:87.26:0,87,1889	0/0:27,0:27:72.25:0,72,1643	0/0:34,0:32:82.99:0,83,1524	0/0:21,0:21:54.18:0,54,1256	0/0:73,0:73:99:0,202,4207	1/1:11,0:11:18.05:244,18,0	1/1:8,0:8:21.06:243,21,0	1/1:30,0:29:48.14:633,48,0	0/0:23,0:23:69.23:0,69,1479	0/0:27,0:27:76.50:0,77,1684	0/0:21,0:21:63.22:0,63,1457	0/0:14,0:14:39.13:0,39,1000
chr10	75372248	.	GCA	G	1042.78	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.877;DP=721;FS=3.024;HRun=0;HaplotypeScore=121.9512;InbreedingCoeff=0.9714;MQ=59.03;MQ0=5;MQRankSum=-1.801;QD=7.05;ReadPosRankSum=1.125;VQSLOD=3.3539;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:29:30.46:108,30,0	0/0:6,0:6:18.06:0,18,347	0/0:25,0:4:11.07:0,11,165	0/0:25,0:9:26.04:0,26,260	0/0:29,0:29:84.29:0,84,1597	0/0:19,0:19:57.18:0,57,1044	0/0:31,0:31:93.27:0,93,1666	0/0:27,0:27:60.64:0,61,1016	1/1:13,6:19:7.50:151,7,0	0/0:28,0:28:84.29:0,84,1588	0/0:25,0:25:72.23:0,72,1321	1/1:22,8:30:46.35:329,46,0	1/1:14,7:21:36.26:305,36,0	0/0:33,0:33:99:0,99,1852	0/0:26,0:26:75.26:0,75,1419	0/0:18,0:18:51.17:0,51,968	0/0:37,0:37:96.27:0,96,1713	0/0:26,0:26:78.19:0,78,1407	0/0:31,0:31:87.29:0,87,1589	0/0:23,0:23:63.17:0,63,1087	0/0:72,0:72:99:0,211,3908	1/1:6,5:11:14.88:82,15,0	1/1:8,0:8:16.12:56,16,0	1/1:24,5:29:39.02:206,39,0	0/0:24,0:24:72.25:0,72,1359	0/0:28,0:28:84.27:0,84,1527	0/0:25,0:25:75.25:0,75,1327	0/0:15,0:15:42.14:0,42,772
chr10	75372250	.	A	ACG	4326.77	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=0.216;DP=732;FS=3.671;HRun=0;HaplotypeScore=113.0603;InbreedingCoeff=0.8904;MQ=59.90;MQ0=5;MQRankSum=1.131;QD=28.28;ReadPosRankSum=1.785;VQSLOD=6.5252;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:30:11.31:283,0,11	0/0:6,0:6:18.06:0,18,265	0/0:24,0:4:9.03:0,9,121	0/0:26,0:10:16.11:0,16,189	0/0:28,0:28:81.26:0,81,1171	0/0:20,0:20:57.14:0,57,778	0/0:33,0:33:90.18:0,90,1200	0/0:24,0:24:51.16:0,51,717	1/1:6,13:19:44.82:684,45,0	0/0:28,0:28:75.23:0,75,1053	0/0:24,0:24:63.17:0,63,886	1/1:9,22:32:65.69:1085,66,0	1/1:8,12:20:50.97:800,51,0	0/0:33,0:33:99:0,99,1411	0/0:26,0:26:72.24:0,72,1056	0/0:21,0:21:60.15:0,60,806	0/0:35,0:35:90.28:0,90,1300	0/0:26,0:26:75.18:0,75,1039	0/0:34,0:34:87.21:0,87,1235	0/0:24,0:24:66.15:0,66,874	0/0:71,0:71:99:0,202,2909	1/1:6,6:12:17.89:259,18,0	1/1:0,8:8:21.07:392,21,0	1/1:6,24:31:47.63:823,48,0	0/0:26,0:26:78.23:0,78,1102	0/0:30,0:30:81.25:0,81,1140	0/0:25,0:25:72.21:0,72,1014	0/0:15,0:15:36.12:0,36,525
chr10	75372640	.	T	TA	2113.59	PASS	AB=0.833;AC=14;AF=0.250;AN=56;BaseQRankSum=-3.173;DP=579;FS=3.139;HRun=10;HaplotypeScore=61.0601;InbreedingCoeff=0.8127;MQ=65.73;MQ0=2;MQRankSum=1.145;QD=16.51;ReadPosRankSum=0.240;VQSLOD=3.9986;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,1:24:51.44:267,51,0	0/0:14,0:14:35.95:0,36,296	0/1:19,0:12:9.29:9,0,65	0/0:16,0:14:13.31:0,13,114	0/0:28,1:29:70.51:0,71,558	0/0:15,0:15:41.94:0,42,345	0/0:12,0:12:32.94:0,33,267	0/0:22,0:20:47.70:0,48,379	1/1:1,17:18:23.48:455,23,0	0/0:32,0:32:77.88:0,78,636	0/0:20,0:21:46.94:0,47,370	1/1:1,16:17:39.10:416,39,0	1/1:2,13:15:39.09:411,39,0	0/0:16,0:17:43.97:0,44,348	0/0:25,0:25:62.91:0,63,515	0/0:32,1:33:57.87:0,58,673	0/0:29,0:29:80.89:0,81,661	0/0:11,0:12:23.01:0,23,178	0/0:14,0:14:29.96:0,30,246	0/0:28,1:30:67.92:0,68,548	0/0:17,0:17:35.93:0,36,293	1/1:2,6:8:12.03:128,12,0	1/1:4,17:21:32.50:551,32,0	0/1:3,2:6:12.78:66,0,13	0/0:34,1:35:58.77:0,59,701	0/0:26,0:26:65.91:0,66,542	0/0:35,1:36:63.87:0,64,725	0/0:15,0:16:43.99:0,44,351
chr10	75378680	.	GGT	G	356.40	PASS	AB=0.900;AC=14;AF=0.269;AN=52;BaseQRankSum=3.517;DP=463;FS=6.241;HRun=0;HaplotypeScore=67.1099;InbreedingCoeff=0.2067;MQ=59.46;MQ0=15;MQRankSum=0.783;QD=1.91;ReadPosRankSum=0.368;VQSLOD=0.7895;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:8.37:0,8,96	0/0:2,0:2:6.02:0,6,89	./.	0/0:22,0:12:0:0,0,0	1/1:11,0:13:11.86:111,12,0	0/1:12,2:14:23.42:23,0,55	0/1:19,0:19:8.14:8,0,38	0/0:14,0:13:2.97:0,3,20	./.	1/1:10,3:13:6:57,6,0	1/1:9,8:17:14.87:143,15,0	0/0:9,0:17:8.97:0,9,72	0/0:7,0:7:2.90:0,3,16	0/0:13,0:13:11.99:0,12,117	0/0:12,0:13:15.04:0,15,204	0/1:10,3:13:32.56:67,0,33	0/1:32,3:34:49.12:49,0,467	0/0:23,0:23:15:0,15,162	0/0:8,0:7:2.98:0,3,21	0/1:14,0:13:11.17:11,0,244	0/1:30,5:33:1.62:2,0,315	0/0:13,0:13:6:0,6,51	0/0:11,0:12:6:0,6,51	0/0:26,0:25:5.82:0,6,49	1/1:11,1:11:3.01:32,3,0	0/0:16,0:16:24.06:0,24,319	0/0:18,0:18:14.93:0,15,319	0/0:5,0:5:3.01:0,3,41
chr10	75379083	.	GGT	G	4176.15	PASS	AB=0.946;AC=14;AF=0.250;AN=56;BaseQRankSum=9.954;DP=852;FS=6.128;HRun=0;HaplotypeScore=108.0986;InbreedingCoeff=0.8080;MQ=67.36;MQ0=4;MQRankSum=0.885;QD=17.05;ReadPosRankSum=4.541;VQSLOD=3.4837;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,3:58:35.90:0,36,1471	0/0:9,0:9:24.08:0,24,368	0/1:38,1:26:2.25:2,0,341	0/0:25,0:18:29.99:0,30,424	0/0:27,0:26:57.19:0,57,906	0/0:22,0:21:25.72:0,26,717	0/0:33,2:35:3.33:0,3,1020	0/0:40,0:40:48.02:0,48,1034	1/1:5,21:30:62.42:665,62,0	0/0:33,0:33:24.22:0,24,820	0/0:28,0:28:59.11:0,59,870	1/1:4,29:34:59.71:697,60,0	1/1:8,31:39:30.09:850,30,0	0/0:24,0:23:48.16:0,48,746	0/0:37,0:38:60.33:0,60,1344	0/0:30,1:30:36.17:0,36,967	0/0:37,0:37:80.05:0,80,1214	0/0:18,0:18:36.12:0,36,563	0/1:20,1:22:5.20:5,0,478	0/0:18,0:18:45.62:0,46,715	0/0:61,1:62:63.92:0,64,1857	1/1:4,16:20:30.09:360,30,0	1/1:4,11:15:30.09:360,30,0	1/1:8,37:46:99:1237,105,0	0/0:21,1:22:9.17:0,9,587	0/0:37,0:37:8.10:0,8,722	0/0:24,0:24:45.15:0,45,687	0/0:17,0:18:12.93:0,13,333
chr10	75380311	.	GA	G	1604.25	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.926;DP=629;FS=1.379;HRun=12;HaplotypeScore=70.2676;InbreedingCoeff=0.8923;MQ=64.11;MQ0=2;MQRankSum=0.230;QD=14.20;ReadPosRankSum=0.353;VQSLOD=4.1801;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:23:13.86:0,14,71	0/0:6,0:6:15.03:0,15,152	0/0:13,0:10:2.15:0,2,70	0/0:16,0:6:1.76:0,2,75	0/0:37,2:39:46.37:0,46,798	0/0:14,0:15:38.91:0,39,380	0/0:12,0:12:23.93:0,24,244	0/0:25,0:25:56.10:0,56,556	1/1:4,13:18:7.46:231,7,0	0/0:35,0:35:87.83:0,88,842	0/0:25,0:25:54.11:0,54,546	1/1:8,19:27:35.06:441,35,0	1/1:5,10:15:26.87:208,27,0	0/0:27,0:27:74.15:0,74,719	0/0:19,1:21:15.55:0,16,420	0/0:22,1:24:39.71:0,40,564	0/0:30,0:30:78.15:0,78,792	0/0:22,0:22:57.07:0,57,567	0/0:18,0:18:41.92:0,42,410	0/0:29,1:30:50.13:0,50,669	0/0:24,0:24:54.58:0,55,549	1/1:1,12:13:32.87:255,33,0	1/1:4,17:21:19.17:278,19,0	1/1:1,18:19:47.81:372,48,0	0/0:16,0:17:50.37:0,50,450	0/0:29,1:30:34.61:0,35,541	0/0:31,0:38:95.03:0,95,858	0/0:19,2:22:19.46:0,19,533
chr10	75381905	.	A	AC	509.14	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.847;DP=364;FS=10.720;HRun=6;HaplotypeScore=38.8526;InbreedingCoeff=0.8373;MQ=83.04;MQ0=0;MQRankSum=-0.360;QD=28.29;ReadPosRankSum=0.319;VQSLOD=3.1890;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:48.15:604,48,0	0/0:4,0:4:9.02:0,9,92	0/0:12,0:12:27:0,27,257	0/0:22,0:19:10.49:0,10,272	0/0:12,0:12:30.07:0,30,306	0/0:12,0:12:33.06:0,33,330	0/0:10,0:10:23.95:0,24,242	0/0:14,0:14:30.06:0,30,305	0/0:13,0:13:24.04:0,24,245	0/0:12,0:12:36.07:0,36,362	0/0:22,0:22:60.10:0,60,598	0/0:11,0:11:24.04:0,24,243	0/0:9,0:9:24.05:0,24,245	0/0:13,0:13:33.07:0,33,335	0/0:19,0:19:48.06:0,48,478	0/0:13,0:13:33.07:0,33,337	0/0:24,0:24:68.90:0,69,673	0/0:7,0:7:15.03:0,15,153	0/0:12,0:12:26.98:0,27,254	0/0:11,0:11:30.05:0,30,298	0/0:14,0:14:30.04:0,30,299	0/0:14,0:14:42.10:0,42,428	0/0:9,0:9:27.05:0,27,268	0/0:18,1:19:48.54:0,49,479	0/0:9,0:9:27.03:0,27,266	0/0:13,0:13:24.05:0,24,245	0/0:12,0:12:36.06:0,36,359	0/0:4,0:4:9.02:0,9,92
chr10	75384456	.	TGA	T	2386.07	PASS	AB=0.967;AC=32;AF=0.571;AN=56;BaseQRankSum=1.959;DP=521;FS=16.024;HRun=0;HaplotypeScore=80.4501;InbreedingCoeff=0.2751;MQ=56.06;MQ0=12;MQRankSum=1.140;QD=6.06;ReadPosRankSum=0.722;VQSLOD=1.8592;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:25.17:0,25,241	0/0:10,0:9:10.98:0,11,207	0/1:9,0:4:0.83:1,0,21	0/0:11,0:7:20.85:0,21,178	1/1:31,0:31:35.90:292,36,0	0/0:22,0:22:10.18:0,10,179	0/1:14,0:14:26.33:26,0,192	0/1:30,0:30:4.39:4,0,363	0/1:14,0:14:50.98:51,0,77	1/1:6,4:9:11.96:96,12,0	1/1:11,14:24:3.01:35,3,0	0/1:16,0:15:82.47:100,0,82	0/1:18,0:18:88.77:111,0,89	0/0:18,0:18:8.44:0,8,314	0/0:19,0:19:33.02:0,33,365	1/1:7,12:19:6.01:70,6,0	0/0:24,1:25:18.70:0,19,545	0/1:8,7:16:66.39:66,0,77	1/1:14,1:16:26.84:239,27,0	1/1:11,13:25:26.43:264,26,0	1/1:14,0:12:15.01:144,15,0	0/1:15,0:15:25.30:74,0,25	0/1:16,0:16:9.75:179,0,10	0/1:17,0:17:4.18:135,0,4	1/1:9,10:19:8.85:75,9,0	1/1:9,10:19:26.86:216,27,0	1/1:6,22:28:12.02:130,12,0	1/1:16,5:20:26.99:266,27,0
chr10	75384572	.	ATT	A	4276.20	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.366;DP=484;FS=0.000;HRun=2;HaplotypeScore=57.9014;InbreedingCoeff=0.9976;MQ=80.83;MQ0=0;MQRankSum=-0.856;QD=43.19;ReadPosRankSum=4.691;VQSLOD=4.6697;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:30.06:0,30,567	0/0:12,0:12:36.12:0,36,730	0/0:15,0:15:42.14:0,42,840	0/0:14,0:14:36.12:0,36,686	0/0:15,0:15:45.14:0,45,876	0/0:14,0:14:42.14:0,42,853	0/0:8,0:8:24.08:0,24,486	0/0:36,0:36:99:0,105,1907	1/1:0,24:24:66.23:1073,66,0	0/0:20,0:20:57.16:0,57,1086	0/0:15,0:15:45.13:0,45,876	1/1:0,19:19:54.18:881,54,0	1/1:0,12:12:30.10:489,30,0	0/0:15,0:15:45.15:0,45,914	0/0:16,0:16:48.10:0,48,932	0/0:25,0:25:75.24:0,75,1478	0/0:19,0:19:57.11:0,57,1088	0/0:12,0:12:36.12:0,36,731	0/0:15,0:15:45.14:0,45,848	0/0:27,0:27:81.26:0,81,1609	0/0:18,0:18:54.19:0,54,1093	1/1:0,10:10:21.07:342,21,0	1/1:0,22:22:60.19:978,60,0	1/1:0,12:12:33.10:513,33,0	0/0:26,0:26:78.25:0,78,1539	0/0:21,0:21:63.22:0,63,1276	0/0:25,0:25:75.26:0,75,1509	0/0:7,0:7:21.07:0,21,425
chr10	75386092	.	GGT	G	351.66	PASS	AB=0.953;AC=16;AF=0.296;AN=54;BaseQRankSum=4.288;DP=768;FS=6.539;HRun=0;HaplotypeScore=103.8297;InbreedingCoeff=-0.4233;MQ=61.46;MQ0=47;MQRankSum=0.771;QD=0.80;ReadPosRankSum=-0.123;VQSLOD=1.4974;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,1:46:44.78:0,45,570	0/1:5,1:5:21.23:21,0,105	./.	0/0:55,0:25:3.01:0,3,33	0/1:24,1:24:25.68:26,0,380	0/1:21,0:20:3.16:3,0,314	0/0:10,6:15:12.04:0,12,155	0/1:45,0:44:28.56:29,0,314	0/1:16,0:20:15.96:16,0,19	0/1:18,0:24:31.71:32,0,149	0/0:17,0:23:12:0,12,134	0/1:26,0:28:7.07:7,0,19	0/1:18,0:21:25.58:26,0,73	0/1:22,3:25:68.17:68,0,295	0/0:25,2:26:42.13:0,42,589	0/1:18,1:18:9.19:9,0,274	0/0:30,2:31:20.39:0,20,661	0/0:14,0:13:21.05:0,21,287	0/1:25,0:22:50.88:51,0,58	0/0:21,5:26:3.61:0,4,438	0/1:55,2:51:68.28:68,0,644	0/0:20,0:23:14.99:0,15,151	0/1:22,0:23:6.93:7,0,46	0/1:24,0:38:10.36:10,0,114	0/0:11,0:11:24.06:0,24,331	0/1:27,4:28:87.24:87,0,394	0/1:11,5:15:38.75:39,0,244	0/0:20,0:19:5.20:0,5,373
chr10	75386235	.	C	CT	438.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.724;DP=614;FS=8.772;HRun=7;HaplotypeScore=85.4351;InbreedingCoeff=0.9872;MQ=64.93;MQ0=0;MQRankSum=-5.375;QD=19.91;ReadPosRankSum=-1.702;VQSLOD=2.2687;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,15:22:45.13:533,45,0	0/0:8,0:8:24.03:0,24,226	0/0:14,0:11:23.91:0,24,211	0/0:12,0:11:17.87:0,18,154	0/0:32,0:32:87.14:0,87,839	0/0:17,0:17:51.08:0,51,492	0/0:19,0:19:45.06:0,45,432	0/0:24,0:24:48.04:0,48,463	0/0:20,0:20:51.07:0,51,492	0/0:34,0:34:96.15:0,96,927	0/0:19,0:19:51.05:0,51,481	0/0:23,0:23:57.09:0,57,550	0/0:24,0:24:60.09:0,60,578	0/0:22,0:22:60.10:0,60,579	0/0:25,0:25:72.11:0,72,695	0/0:29,0:29:75.07:0,75,705	0/0:33,0:33:87.13:0,87,840	0/0:22,0:22:58.37:0,58,601	0/0:33,0:33:90.13:0,90,865	0/0:30,0:30:87.14:0,87,840	0/0:14,0:14:42.07:0,42,406	0/0:15,0:15:45.07:0,45,433	0/0:17,0:17:42.07:0,42,405	0/0:18,0:18:35.68:0,36,320	0/0:17,0:17:39.06:0,39,376	0/0:31,0:31:90.13:0,90,863	0/0:28,0:27:69.07:0,69,653	0/0:12,0:12:36.06:0,36,348
chr10	75386251	.	A	ATTTAT	10726.27	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-7.706;DP=620;FS=2.195;HRun=0;HaplotypeScore=107.4410;InbreedingCoeff=0.9988;MQ=62.72;MQ0=0;MQRankSum=-7.136;QD=71.51;ReadPosRankSum=0.593;VQSLOD=6.4866;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,14:20:42.14:1200,42,0	0/0:10,0:10:30.08:0,30,582	0/0:18,0:16:22.23:0,22,837	0/0:13,0:13:26.83:0,27,483	0/0:33,0:33:93.32:0,93,1914	0/0:22,0:22:60.19:0,60,1205	0/0:13,0:13:36.12:0,36,728	0/0:25,0:25:66.23:0,66,1354	1/1:3,17:21:60.21:1777,60,0	0/0:33,0:33:90.31:0,90,1859	0/0:17,0:17:48.16:0,48,994	1/1:7,16:23:57.20:1631,57,0	1/1:0,23:23:63.22:1930,63,0	0/0:17,0:17:51.18:0,51,1045	0/0:27,0:27:66.23:0,66,1368	0/0:23,0:23:66.23:0,66,1368	0/0:31,0:31:84.26:0,84,1700	0/0:24,0:24:63.19:0,63,1257	0/0:30,0:30:84.29:0,84,1740	0/0:34,0:34:99:0,99,2039	0/0:16,0:16:45.15:0,45,933	1/1:2,17:20:54.14:1585,54,0	1/1:8,17:26:69.19:1845,69,0	1/1:2,11:16:27.06:759,27,0	0/0:13,0:13:33.11:0,33,684	0/0:31,0:31:93.32:0,93,1928	0/0:27,0:27:75.26:0,75,1542	0/0:12,0:12:30.10:0,30,622
chr10	75387173	.	GTAGGTTCTGGCAACTGT	G	1698.56	PASS	AB=0.970;AC=3;AF=0.054;AN=56;BaseQRankSum=6.096;DP=671;FS=1.079;HRun=0;HaplotypeScore=291.8307;InbreedingCoeff=0.6456;MQ=76.24;MQ0=0;MQRankSum=-6.129;QD=36.14;ReadPosRankSum=0.487;VQSLOD=2.4397;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:36.12:1752,36,0	0/0:9,0:9:21.07:0,21,1737	0/0:16,0:16:42.13:0,42,2289	0/0:13,0:13:32.14:0,32,1799	0/0:32,0:32:90.31:0,90,6802	0/0:24,0:24:72.25:0,72,5603	0/0:21,0:21:60.18:0,60,3978	0/0:40,0:40:99:0,108,6868	0/0:22,0:22:63.22:0,63,5045	0/0:29,0:29:87.30:0,87,6768	0/0:17,0:17:51.16:0,51,3887	0/0:34,0:34:90.31:0,90,6924	0/0:26,0:26:78.27:0,78,6160	0/0:25,0:25:72.25:0,72,5635	0/0:41,0:41:99:0,111,7702	0/0:43,0:43:99:0,126,9698	0/0:18,0:18:54.19:0,54,4219	0/0:16,0:16:45.15:0,45,3301	0/0:21,0:21:57.20:0,57,4242	0/0:23,0:23:66.23:0,66,5317	0/0:31,0:31:90.31:0,90,6653	0/0:23,0:23:66.23:0,66,4978	0/0:21,0:21:60.19:0,60,4254	0/0:15,0:15:45.15:0,45,3628	0/0:22,0:22:66.23:0,66,4524	0/1:31,1:32:52.71:53,0,7061	0/0:26,0:26:75.25:0,75,5724	0/0:16,0:16:48.16:0,48,3383
chr10	75387662	.	G	GA	594.71	PASS	AB=0.858;AC=12;AF=0.214;AN=56;BaseQRankSum=2.357;DP=530;FS=3.861;HRun=12;HaplotypeScore=77.1101;InbreedingCoeff=0.4951;MQ=61.75;MQ0=19;MQRankSum=-3.115;QD=4.22;ReadPosRankSum=-0.502;VQSLOD=1.2916;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,1:23:10.66:0,11,222	0/0:3,0:3:5.96:0,6,44	0/0:61,0:14:17.01:0,17,91	0/1:64,1:14:21.19:21,0,62	0/0:23,1:25:28.51:0,29,337	0/0:15,0:16:36.01:0,36,247	0/0:10,1:13:3.52:0,4,167	0/0:24,0:23:32.08:0,32,241	1/1:5,5:10:4.49:175,4,0	0/0:19,0:18:17.76:0,18,128	0/0:19,0:20:35.82:0,36,233	1/1:4,3:7:10.57:90,11,0	1/1:9,7:15:18.06:197,18,0	0/0:12,0:12:26.04:0,26,180	0/0:12,0:12:25.87:0,26,178	0/0:16,0:15:37.11:0,37,265	0/0:28,1:30:34.97:0,35,408	0/0:19,0:19:6.53:0,7,161	0/1:12,1:14:1.55:2,0,148	0/0:17,0:18:9.22:0,9,170	0/0:12,0:12:29.51:0,30,207	0/1:5,1:5:13.41:29,0,13	0/1:7,8:15:3.04:176,0,3	1/1:6,1:7:6.01:58,6,0	0/0:18,0:18:38.72:0,39,282	0/0:22,0:23:46.72:0,47,333	0/0:17,1:19:15.45:0,15,249	0/0:3,0:3:5.97:0,6,43
chr10	75387812	.	TA	T	284.77	PASS	AB=0.903;AC=4;AF=0.071;AN=56;BaseQRankSum=5.093;DP=475;FS=7.463;HRun=13;HaplotypeScore=59.1765;InbreedingCoeff=0.3710;MQ=74.55;MQ0=1;MQRankSum=-1.368;QD=5.37;ReadPosRankSum=2.365;VQSLOD=1.6450;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:26:52.20:377,52,0	0/0:2,0:2:6.01:0,6,58	0/0:17,0:12:16.45:0,16,103	0/0:21,0:14:8.44:0,8,45	0/0:19,0:19:48.08:0,48,465	0/0:12,0:14:29.87:0,30,271	0/0:15,0:16:38.90:0,39,365	0/0:25,2:28:35.02:0,35,489	0/0:19,0:19:51.05:0,51,481	0/0:13,0:13:30.05:0,30,292	0/0:23,0:24:56.85:0,57,527	0/0:12,0:12:14.24:0,14,247	0/0:15,1:16:17.06:0,17,299	0/0:16,1:17:20.08:0,20,345	0/0:23,0:23:53.99:0,54,506	0/0:19,1:21:26:0,26,397	0/0:9,2:11:2.13:0,2,182	0/0:17,0:17:48.05:0,48,458	0/0:16,0:15:23.97:0,24,217	0/1:13,2:16:7.74:8,0,241	0/0:11,0:11:5.14:0,5,207	0/0:11,0:11:27.04:0,27,262	0/0:17,1:18:30.04:0,30,288	0/1:10,1:11:0.87:1,0,154	0/0:13,1:14:5.13:0,5,211	0/0:25,0:25:63.09:0,63,608	0/0:18,0:19:47.77:0,48,431	0/0:16,1:17:14.15:0,14,299
chr10	75387968	.	AATGT	A	860.26	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=6.569;DP=554;FS=3.191;HRun=0;HaplotypeScore=85.7702;InbreedingCoeff=0.6425;MQ=68.83;MQ0=0;MQRankSum=-1.708;QD=30.72;ReadPosRankSum=1.505;VQSLOD=3.2879;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:51.09:946,51,0	0/0:8,0:8:24.08:0,24,657	0/0:9,0:9:21.07:0,21,524	0/1:4,0:4:19.85:20,0,94	0/0:34,0:34:99:0,99,2511	0/0:20,0:20:57.18:0,57,1503	0/0:7,0:7:21.07:0,21,573	0/0:45,0:45:99:0,123,2977	0/0:14,0:14:39.13:0,39,1068	0/0:27,0:28:84.27:0,84,2136	0/0:27,0:27:78.25:0,78,2032	0/0:18,0:18:48.13:0,48,1198	0/0:13,0:13:39.12:0,39,1010	0/0:22,0:22:66.23:0,66,1805	0/0:34,0:34:99:0,102,2642	0/0:27,0:27:78.22:0,78,1964	0/0:15,0:15:42.06:0,42,945	0/0:24,0:24:72.25:0,72,1969	0/0:15,0:15:38.72:0,39,985	0/0:22,0:22:66.23:0,66,1797	0/0:11,0:11:30.10:0,30,821	0/0:15,0:15:45.15:0,45,1181	0/0:18,0:18:54.17:0,54,1406	0/0:7,0:7:21.07:0,21,539	0/0:26,0:26:75.26:0,75,2021	0/0:36,0:36:99:0,108,2801	0/0:23,0:22:63.20:0,63,1631	0/0:8,0:8:24.08:0,24,657
chr10	75388490	.	GCA	G	1660.20	PASS	AB=0.860;AC=21;AF=0.375;AN=56;BaseQRankSum=10.009;DP=487;FS=2.597;HRun=0;HaplotypeScore=80.3915;InbreedingCoeff=0.2995;MQ=59.36;MQ0=5;MQRankSum=2.847;QD=6.15;ReadPosRankSum=3.647;VQSLOD=2.4639;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:33:27.01:0,27,276	0/1:4,0:5:20:20,0,82	0/0:8,0:4:8.93:0,9,64	0/0:11,0:10:11.86:0,12,94	0/1:12,4:16:63.02:63,0,394	0/1:17,3:20:31.32:31,0,358	0/0:23,0:23:23.83:0,24,423	0/1:22,2:24:11.05:11,0,392	1/1:4,7:10:18.05:208,18,0	0/0:18,0:18:39.11:0,39,548	0/0:13,0:13:33.08:0,33,466	1/1:7,12:20:26.79:291,27,0	1/1:6,8:14:11.65:138,12,0	0/1:14,0:14:3.51:4,0,254	0/0:20,4:23:4.52:0,5,481	0/0:12,0:12:30.07:0,30,418	0/0:25,0:25:45.12:0,45,650	0/0:8,0:8:18.06:0,18,280	0/0:7,0:7:20.59:0,21,183	0/1:13,6:19:99:107,0,373	0/1:32,5:36:35:35,0,793	1/1:3,6:9:12.04:138,12,0	1/1:3,9:13:17.89:187,18,0	1/1:11,23:34:45.13:519,45,0	0/0:26,0:26:42.07:0,42,534	0/1:15,5:19:87.44:87,0,416	0/1:12,2:14:10.64:11,0,238	0/0:8,0:8:18.06:0,18,272
chr10	75388871	.	CT	C	614.96	PASS	AB=0.952;AC=4;AF=0.071;AN=56;BaseQRankSum=5.718;DP=561;FS=9.911;HRun=10;HaplotypeScore=64.4617;InbreedingCoeff=0.4152;MQ=76.97;MQ0=0;MQRankSum=0.324;QD=8.20;ReadPosRankSum=-0.170;VQSLOD=1.1299;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,30:35:80.97:703,81,0	0/0:7,1:8:21.06:0,21,232	0/1:18,1:17:13.33:13,0,253	0/1:20,1:20:8.22:8,0,182	0/0:18,0:19:50.92:0,51,524	0/0:19,0:19:42.11:0,42,465	0/0:22,0:22:54.15:0,54,597	0/0:40,0:40:87.23:0,87,959	0/0:19,0:19:45.11:0,45,490	0/0:13,0:14:38.94:0,39,412	0/0:15,0:15:39.11:0,39,431	0/0:19,0:19:45.09:0,45,482	0/0:25,0:25:66.16:0,66,715	0/0:21,0:21:60.16:0,60,663	0/0:20,0:20:48.13:0,48,529	0/0:37,0:36:93.08:0,93,1027	0/0:25,1:26:46.07:0,46,711	0/0:13,0:13:33.09:0,33,365	0/0:10,0:10:21.06:0,21,232	0/0:19,1:20:31.06:0,31,546	0/0:23,0:24:72.01:0,72,769	0/0:3,0:3:9.02:0,9,100	0/0:17,0:17:45.12:0,45,498	0/0:21,2:23:2.03:0,2,479	0/0:20,0:20:51.13:0,51,556	0/0:17,0:16:45.10:0,45,486	0/0:21,0:22:60:0,60,645	0/0:13,0:13:24.06:0,24,265
chr10	75389080	.	C	CAT	2974.82	PASS	AB=0.718;AC=11;AF=0.196;AN=56;BaseQRankSum=-8.305;DP=571;FS=2.350;HRun=0;HaplotypeScore=69.4417;InbreedingCoeff=0.7307;MQ=60.74;MQ0=6;MQRankSum=0.267;QD=24.19;ReadPosRankSum=5.546;VQSLOD=4.0727;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:24:15.92:51,0,16	0/0:13,0:13:36.05:0,36,459	0/0:23,0:13:30.44:0,30,306	0/0:24,0:11:30.04:0,30,347	0/0:29,0:29:84.21:0,84,1177	0/0:20,0:20:60.13:0,60,817	0/0:9,0:9:20.99:0,21,231	0/0:32,0:32:72.22:0,72,1032	1/1:1,18:20:30.10:577,30,0	0/0:22,0:21:63.14:0,63,846	0/0:15,0:14:13.50:0,13,388	1/1:1,23:24:42.14:808,42,0	1/1:0,20:20:39.13:751,39,0	0/0:24,0:24:44.67:0,45,914	0/0:22,0:22:66.08:0,66,812	0/0:32,0:32:87.17:0,87,1171	0/0:35,0:35:99:0,102,1173	0/0:13,0:13:36.03:0,36,477	0/0:21,0:21:57.33:0,57,555	0/0:18,0:18:54.06:0,54,703	0/0:20,0:20:59.95:0,60,684	1/1:0,10:10:21.07:404,21,0	0/1:4,7:11:11.35:396,0,11	0/1:2,11:13:0.20:161,0,0	0/0:17,0:17:45.09:0,45,597	0/0:13,0:13:30.04:0,30,373	0/0:27,0:27:80.87:0,81,1018	0/0:19,0:19:53.96:0,54,615
chr10	75391972	.	TATGCAAGTGTGG	T	5872.35	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.368;DP=562;FS=37.385;HRun=0;HaplotypeScore=160.2834;InbreedingCoeff=0.9283;MQ=48.06;MQ0=24;MQRankSum=-10.507;QD=57.57;ReadPosRankSum=3.824;VQSLOD=2.9893;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:72.25:0,72,4132	0/0:2,0:2:6.02:0,6,287	0/0:5,0:1:3.01:0,3,173	0/0:10,0:7:21.07:0,21,1145	0/0:34,0:34:81.11:0,81,4065	0/0:33,0:32:78.23:0,78,4531	0/0:14,0:13:39.13:0,39,2315	0/0:25,0:22:60.19:0,60,3052	1/1:3,14:10:24.08:887,24,0	0/0:23,0:21:60.21:0,60,3580	0/0:29,0:29:60.12:0,60,3230	1/1:4,26:25:48.16:1771,48,0	1/1:2,16:13:21.07:776,21,0	0/0:17,0:15:39.13:0,39,2354	0/0:20,0:20:45.12:0,45,2562	0/0:26,0:24:57.20:0,57,3380	0/0:23,0:21:48.16:0,48,2636	0/0:11,0:9:21.07:0,21,1279	0/0:25,0:21:57.20:0,57,3047	0/0:36,0:36:90.22:0,90,5062	0/0:27,0:26:78.22:0,78,4356	1/1:2,9:11:23.69:886,24,0	1/1:2,15:17:33.11:1219,33,0	1/1:2,7:9:9.03:332,9,0	0/0:15,0:15:27.05:0,27,1381	0/0:27,0:24:69.23:0,69,3592	0/0:22,0:18:41.93:0,42,2525	0/0:11,0:9:18.03:0,18,835
chr10	75392866	.	C	CTGTT	15044.86	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-14.936;DP=855;FS=1.692;HRun=0;HaplotypeScore=129.7209;InbreedingCoeff=0.9999;MQ=79.23;MQ0=2;MQRankSum=-6.249;QD=62.69;ReadPosRankSum=4.705;VQSLOD=6.3721;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,34:41:92.99:2351,93,0	0/0:15,0:15:39.12:0,39,682	0/0:26,0:26:70.79:0,71,1199	0/0:32,0:32:88.07:0,88,1462	0/0:37,0:37:99:0,111,2007	0/0:20,0:19:60.21:0,60,1105	0/0:26,0:26:52.83:0,53,1268	0/0:43,0:43:99:0,111,1970	1/1:3,35:41:96.33:2549,96,0	0/0:40,0:40:99:0,117,2101	0/0:21,0:21:63.20:0,63,1118	1/1:3,35:40:99:2674,102,0	1/1:4,28:34:84.29:2231,84,0	0/0:34,0:34:93.30:0,93,1673	0/0:46,0:46:99:0,126,2305	0/0:36,0:36:99:0,105,1881	0/0:36,0:36:99:0,105,1929	0/0:21,0:21:60.16:0,60,1038	0/0:26,0:26:66.20:0,66,1158	0/0:36,0:36:99:0,102,1864	0/0:27,0:27:81.26:0,81,1452	1/1:2,20:21:60.21:1598,60,0	1/1:3,30:34:81.28:2121,81,0	1/1:4,22:27:59.77:1520,60,0	0/0:19,0:19:51.17:0,51,918	0/0:29,0:29:81.26:0,81,1481	0/0:34,0:33:96.33:0,96,1752	0/0:11,0:11:33.06:0,33,534
chr10	75393524	.	C	CT	1853.45	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-6.052;DP=524;FS=0.491;HRun=8;HaplotypeScore=48.5459;InbreedingCoeff=0.9103;MQ=65.56;MQ0=0;MQRankSum=1.219;QD=21.55;ReadPosRankSum=3.616;VQSLOD=3.7673;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:20:30.81:0,31,455	0/0:7,0:7:21.01:0,21,192	0/1:9,0:9:0.32:0,0,141	0/0:3,0:3:7.80:0,8,39	0/0:33,0:32:90.04:0,90,822	0/0:25,0:25:75.03:0,75,682	0/0:17,0:17:47.99:0,48,429	0/0:28,0:28:63.01:0,63,570	1/1:1,13:14:30.09:346,30,0	0/0:25,0:25:66.03:0,66,604	0/0:27,0:27:72.02:0,72,653	1/1:2,11:13:11.62:374,12,0	1/1:4,15:19:39.12:450,39,0	0/0:22,0:22:63.03:0,63,576	0/0:16,0:16:41.98:0,42,375	0/0:26,0:26:72.03:0,72,655	0/0:16,0:17:47.06:0,47,418	0/0:11,0:11:27.01:0,27,247	0/0:18,0:18:48.01:0,48,436	0/0:41,0:41:99:0,114,1029	0/0:5,0:5:9:0,9,82	1/1:2,6:8:18.05:208,18,0	1/1:1,14:15:39.12:450,39,0	1/1:2,6:8:18.05:208,18,0	0/0:22,0:22:66.04:0,66,604	0/0:34,0:34:93.04:0,93,847	0/0:27,0:27:71.99:0,72,648	0/0:14,0:14:42.02:0,42,384
chr10	75398373	.	CA	C	1724.64	PASS	AB=0.905;AC=13;AF=0.232;AN=56;BaseQRankSum=10.057;DP=526;FS=6.074;HRun=9;HaplotypeScore=52.7098;InbreedingCoeff=0.8919;MQ=76.80;MQ0=0;MQRankSum=-0.692;QD=17.78;ReadPosRankSum=1.722;VQSLOD=3.7706;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.24:0,87,992	0/0:7,0:7:15.04:0,15,173	0/0:10,0:9:20.99:0,21,204	0/1:17,2:19:20.31:20,0,246	0/0:21,0:21:54.15:0,54,615	0/0:26,0:26:69.20:0,69,796	0/0:5,0:5:15.04:0,15,173	0/0:41,0:41:99:0,105,1196	1/1:2,16:18:48.02:439,48,0	0/0:24,0:24:57.16:0,57,645	0/0:18,0:18:54.16:0,54,623	1/1:1,14:15:39.02:357,39,0	1/1:0,11:11:33.02:302,33,0	0/0:19,0:19:45.11:0,45,507	0/0:22,0:22:63.19:0,63,726	0/0:22,0:22:60.18:0,60,692	0/0:28,0:28:84.22:0,84,957	0/0:10,0:10:30.07:0,30,335	0/0:23,0:23:57.14:0,57,639	0/0:26,0:26:69.20:0,69,788	0/0:11,0:11:24.07:0,24,277	1/1:1,7:8:18:165,18,0	1/1:2,14:16:39.01:357,39,0	1/1:0,10:10:30.02:275,30,0	0/0:27,0:27:69.19:0,69,787	0/0:14,0:14:36.11:0,36,414	0/0:27,0:27:69.20:0,69,795	0/0:18,0:18:54.09:0,54,571
chr10	75400237	.	A	ACAT	1764.86	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=0.591;DP=667;FS=25.011;HRun=0;HaplotypeScore=87.3083;InbreedingCoeff=0.8956;MQ=55.65;MQ0=22;MQRankSum=-7.944;QD=22.34;ReadPosRankSum=2.705;VQSLOD=1.7185;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.24:0,81,1318	0/0:12,0:12:36.11:0,36,570	0/0:27,0:22:59.65:0,60,897	0/0:32,0:31:87.11:0,87,1324	0/0:34,0:34:99:0,102,1617	0/0:25,0:25:72.25:0,72,1197	0/0:31,0:31:93.12:0,93,1399	0/0:33,0:29:84.74:0,85,1369	1/1:0,6:3:3.01:68,3,0	0/0:28,0:27:81.28:0,81,1345	0/0:27,0:27:78.26:0,78,1273	1/1:3,7:6:6.02:135,6,0	1/1:2,11:8:12.04:271,12,0	0/0:21,0:21:63.14:0,63,992	0/0:31,0:31:81.19:0,81,1287	0/0:34,1:34:99:0,99,1588	0/0:35,0:35:99:0,102,1655	0/0:21,0:21:57.19:0,57,950	0/0:21,0:21:57.17:0,57,898	0/0:23,0:22:63.22:0,63,1050	0/0:18,0:18:54.18:0,54,897	1/1:1,20:16:33.11:712,33,0	1/1:2,18:14:30.10:677,30,0	1/1:3,3:3:3.01:68,3,0	0/0:23,0:23:51.17:0,51,849	0/0:20,0:20:60.19:0,60,974	0/0:42,0:42:99:0,117,1942	0/0:18,0:18:54.15:0,54,841
chr10	75401509	.	C	CAATT	9677.23	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-6.610;DP=706;FS=6.512;HRun=0;HaplotypeScore=110.8848;InbreedingCoeff=0.9268;MQ=63.00;MQ0=1;MQRankSum=-5.428;QD=61.25;ReadPosRankSum=0.401;VQSLOD=6.7396;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,2386	0/0:5,0:5:15.05:0,15,297	0/0:18,0:17:51.09:0,51,1008	0/1:13,0:12:3.30:3,0,476	0/0:32,0:32:92.84:0,93,1894	0/0:25,0:25:75.24:0,75,1529	0/0:18,0:18:54.19:0,54,1112	0/0:39,0:38:99:0,114,2230	1/1:1,20:22:51.18:1470,51,0	0/0:25,0:25:75.26:0,75,1534	0/0:23,0:23:62.98:0,63,1243	1/1:0,13:15:36.12:1041,36,0	1/1:3,32:37:90.31:2579,90,0	0/0:27,0:27:81.24:0,81,1562	0/0:39,0:39:99:0,117,2409	0/0:34,0:34:99:0,99,1960	0/0:33,0:33:96.29:0,96,1908	0/0:16,0:16:45.14:0,45,903	0/0:25,0:25:75.23:0,75,1436	0/0:25,0:25:75.22:0,75,1423	0/0:23,0:23:69.19:0,69,1302	1/1:2,18:23:66.10:1672,66,0	1/1:4,14:19:45.10:1177,45,0	1/1:1,24:28:60.21:1734,60,0	0/0:29,0:29:87.28:0,87,1767	0/0:31,0:31:93.31:0,93,1895	0/0:32,0:32:96.29:0,96,1879	0/0:7,0:7:21.07:0,21,419
chr10	75405893	.	CT	C	3676.28	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.595;DP=595;FS=3.559;HRun=3;HaplotypeScore=57.6827;InbreedingCoeff=0.9967;MQ=84.71;MQ0=0;MQRankSum=-1.662;QD=34.36;ReadPosRankSum=1.830;VQSLOD=4.3007;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.17:0,51,734	0/0:6,0:6:15.05:0,15,216	0/0:20,0:20:50.83:0,51,802	0/0:20,0:20:41.88:0,42,540	0/0:33,0:33:99:0,99,1404	0/0:26,0:26:72.24:0,72,1036	0/0:23,0:23:69.23:0,69,991	0/0:23,0:23:66.21:0,66,919	1/1:0,12:12:36.11:446,36,0	0/0:22,0:21:66.22:0,66,951	0/0:26,0:26:78.26:0,78,1123	1/1:2,18:20:54.17:664,54,0	1/1:0,22:22:63.20:781,63,0	0/0:22,0:22:60.19:0,60,847	0/0:35,0:35:99:0,105,1494	0/0:23,0:22:66.22:0,66,950	0/0:21,0:21:63.20:0,63,889	0/0:18,0:18:51.17:0,51,734	0/0:28,0:28:78.23:0,78,1073	0/0:25,0:25:72.24:0,72,1036	0/0:21,0:21:63.20:0,63,889	1/1:1,12:13:33.10:409,33,0	1/1:0,17:17:48.15:595,48,0	1/1:1,22:23:63.20:781,63,0	0/0:18,0:18:51.10:0,51,675	0/0:23,0:23:69.22:0,69,963	0/0:23,0:22:66.19:0,66,913	0/0:14,0:14:42.14:0,42,603
chr10	75406086	.	A	AT	1082.31	PASS	AB=0.842;AC=12;AF=0.214;AN=56;BaseQRankSum=-4.253;DP=476;FS=0.000;HRun=12;HaplotypeScore=51.7958;InbreedingCoeff=0.7360;MQ=67.60;MQ0=0;MQRankSum=1.473;QD=11.76;ReadPosRankSum=2.725;VQSLOD=3.1671;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:23:57.76:0,58,406	0/0:5,0:5:8.92:0,9,66	0/1:9,0:6:2.45:2,0,5	0/0:8,0:8:2.21:0,2,67	0/0:24,0:26:49.63:0,50,355	0/0:12,0:14:30.92:0,31,209	0/0:13,2:15:6.60:0,7,212	0/0:28,0:28:53.57:0,54,391	1/1:4,6:11:14.86:131,15,0	0/0:15,0:15:38.74:0,39,285	0/0:16,0:16:41.71:0,42,304	1/1:4,7:11:20.87:189,21,0	1/1:2,20:22:54.04:516,54,0	0/0:17,0:17:40.68:0,41,281	0/0:26,0:26:62.52:0,63,454	0/0:21,0:21:44.66:0,45,326	0/0:22,0:23:44.27:0,44,328	0/0:19,0:19:50.38:0,50,371	0/0:18,1:22:16:0,16,251	0/0:22,0:22:53.63:0,54,393	0/0:8,0:10:21.91:0,22,140	1/1:4,2:7:8.85:73,9,0	0/1:7,6:13:25.79:99,0,26	1/1:5,11:16:8.18:241,8,0	0/0:14,0:15:25.14:0,25,180	0/0:22,0:22:56.65:0,57,414	0/0:26,0:27:58.59:0,59,417	0/0:9,0:10:19.85:0,20,131
chr10	75406289	.	TA	T	711.14	PASS	AB=0.593;AC=10;AF=0.179;AN=56;BaseQRankSum=3.974;DP=505;FS=3.261;HRun=14;HaplotypeScore=56.8524;InbreedingCoeff=0.7443;MQ=60.44;MQ0=14;MQRankSum=1.149;QD=10.46;ReadPosRankSum=2.285;VQSLOD=3.3368;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:28:54.20:0,54,487	0/0:9,0:9:17.61:0,18,148	0/0:45,0:9:11.94:0,12,127	0/0:29,0:8:16.94:0,17,94	0/0:29,0:29:53.95:0,54,515	0/0:14,0:14:30.03:0,30,278	0/0:9,0:9:20.99:0,21,184	0/0:25,0:25:47.26:0,47,479	0/1:2,6:8:7.21:95,0,7	0/0:13,0:17:47.75:0,48,405	0/0:17,0:18:44.89:0,45,404	1/1:1,6:6:11.89:82,12,0	1/1:4,19:23:38.62:267,39,0	0/0:7,0:7:18.02:0,18,167	0/0:6,0:6:9.01:0,9,82	0/0:15,1:16:12.45:0,12,255	0/0:26,0:27:50.81:0,51,427	0/0:20,1:20:27.14:0,27,370	0/0:22,2:23:17.72:0,18,433	0/0:17,0:17:38.79:0,39,333	0/0:7,0:7:11.63:0,12,111	0/1:3,5:8:9.98:85,0,10	1/1:1,12:12:26.77:185,27,0	1/1:2,7:9:23.79:164,24,0	0/0:15,0:15:23.96:0,24,268	0/0:18,0:18:40.54:0,41,353	0/0:24,2:30:34.04:0,34,555	0/0:24,0:22:53.04:0,53,485
chr10	75407321	.	CGT	C	755.21	PASS	AB=0.898;AC=21;AF=0.389;AN=54;BaseQRankSum=8.200;DP=648;FS=3.929;HRun=0;HaplotypeScore=83.1837;InbreedingCoeff=-0.0634;MQ=61.79;MQ0=9;MQRankSum=0.051;QD=1.92;ReadPosRankSum=1.863;VQSLOD=1.6452;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:41:15.02:0,15,168	0/0:8,0:8:6.02:0,6,89	0/0:19,0:13:0.47:0,0,1	./.	0/1:18,3:20:20.70:21,0,119	0/1:17,1:18:17.73:18,0,120	0/1:20,1:23:2.84:3,0,332	0/0:29,0:29:8.98:0,9,90	0/1:12,4:17:24.03:138,0,24	0/0:25,0:25:8.95:0,9,87	0/0:16,0:16:8.99:0,9,91	1/1:17,0:27:22.73:112,23,0	1/1:15,0:20:17.04:84,17,0	0/1:21,2:23:19.79:20,0,262	0/0:18,0:18:1:0,1,163	0/1:22,1:25:55.43:55,0,199	0/1:24,3:28:10.32:10,0,351	0/1:29,0:29:1.15:1,0,262	0/1:24,2:26:58.45:58,0,138	0/0:26,0:26:2.66:0,3,257	0/0:24,0:24:24.06:0,24,315	1/1:19,0:27:5.68:28,6,0	0/1:18,4:23:26.85:127,0,27	1/1:14,6:21:20.89:210,21,0	0/1:16,3:18:5.65:6,0,289	0/0:26,0:25:6.74:0,7,60	0/1:23,1:24:11.67:12,0,227	0/1:17,1:18:11.64:12,0,227
chr10	75411487	.	G	GAC	8389.58	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-15.874;DP=676;FS=2.363;HRun=0;HaplotypeScore=71.8612;InbreedingCoeff=0.9708;MQ=73.94;MQ0=3;MQRankSum=0.535;QD=44.63;ReadPosRankSum=0.297;VQSLOD=6.3393;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.26:0,78,1113	0/0:5,0:5:15.02:0,15,194	0/0:12,0:12:29.97:0,30,396	0/0:21,0:21:29.30:0,29,544	0/0:35,0:35:96.31:0,96,1355	0/0:17,0:17:48.16:0,48,686	0/0:19,0:19:57.19:0,57,816	0/0:28,0:28:78.24:0,78,1083	0/0:23,0:23:66.22:0,66,943	0/0:19,0:19:51.16:0,51,714	0/0:22,0:22:54.17:0,54,754	0/0:23,0:23:69.22:0,69,970	0/0:33,0:33:99:0,99,1416	0/0:29,0:29:81.25:0,81,1125	0/0:32,0:32:96.32:0,96,1371	0/0:33,0:33:87.29:0,87,1245	0/0:20,0:20:57.16:0,57,790	1/1:1,23:24:57.20:1043,57,0	1/1:1,16:17:48.13:802,48,0	1/1:0,31:30:87.30:1566,87,0	1/1:5,27:32:72.25:1319,72,0	0/0:18,0:18:48.16:0,48,683	0/0:27,0:27:77.93:0,78,1116	0/0:17,0:17:45.07:0,45,583	0/0:28,0:28:84.26:0,84,1166	1/1:2,29:30:4.33:1408,4,0	1/1:0,37:36:87.30:1592,87,0	1/1:0,16:16:36.12:659,36,0
chr10	75412151	.	A	AC	7815.17	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-13.372;DP=694;FS=0.654;HRun=1;HaplotypeScore=68.5832;InbreedingCoeff=0.9999;MQ=85.60;MQ0=0;MQRankSum=0.165;QD=41.13;ReadPosRankSum=0.998;VQSLOD=5.4041;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:90.30:1349,90,0	0/0:13,0:13:36.10:0,36,453	0/0:27,0:27:75.21:0,75,931	0/0:19,0:19:38.21:0,38,476	0/0:31,0:31:84.27:0,84,1090	0/0:18,0:18:54.18:0,54,701	0/0:15,0:15:45.13:0,45,569	0/0:24,0:24:72.23:0,72,923	1/1:1,25:26:72.24:1079,72,0	0/0:31,0:31:90.29:0,90,1168	0/0:18,0:18:51.13:0,51,632	1/1:0,23:23:69.23:1033,69,0	1/1:1,22:23:63.21:939,63,0	0/0:34,0:34:99:0,99,1282	0/0:22,0:22:63.20:0,63,818	0/0:20,0:20:57.18:0,57,739	0/0:25,0:25:75.24:0,75,970	0/0:29,0:29:87.26:0,87,1112	0/0:13,0:13:39.07:0,39,473	0/0:24,0:24:72.23:0,72,932	0/0:47,0:46:99:0,123,1580	1/1:0,33:33:84.28:1256,84,0	1/1:0,27:27:72.24:1079,72,0	1/1:1,25:26:72.24:1079,72,0	0/0:32,0:32:90.27:0,90,1152	0/0:33,0:33:93.30:0,93,1206	0/0:18,0:18:54.18:0,54,701	0/0:11,0:11:33.11:0,33,428
chr10	75414558	.	A	AAG	1844.24	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-10.263;DP=780;FS=10.428;HRun=0;HaplotypeScore=85.7121;InbreedingCoeff=0.9989;MQ=62.29;MQ0=1;MQRankSum=0.944;QD=35.47;ReadPosRankSum=0.982;VQSLOD=5.7403;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,45:51:99:1939,114,0	0/0:11,0:11:27.09:0,27,350	0/0:27,0:20:47.99:0,48,582	0/0:33,0:30:66.18:0,66,831	0/0:22,0:22:54.18:0,54,702	0/0:24,0:24:69.21:0,69,881	0/0:33,0:33:81.26:0,81,1052	0/0:24,0:24:48.16:0,48,625	0/0:33,0:33:93.30:0,93,1210	0/0:29,0:29:81.22:0,81,995	0/0:24,0:24:60.19:0,60,769	0/0:39,0:39:96.31:0,96,1249	0/0:42,0:42:99:0,117,1492	0/0:26,0:26:69.20:0,69,869	0/0:34,0:34:90.29:0,90,1171	0/0:30,0:30:81.26:0,81,1054	0/0:26,0:26:75.23:0,75,957	0/0:24,0:24:57.17:0,57,726	0/0:19,0:19:48.16:0,48,623	0/0:24,0:24:69.19:0,69,854	0/0:42,0:42:99:0,117,1466	0/0:18,0:18:48.16:0,48,624	0/0:18,0:18:42.14:0,42,546	0/0:23,0:23:60.19:0,60,779	0/0:21,0:20:57.16:0,57,725	0/0:31,0:31:75.24:0,75,963	0/0:36,0:35:96.31:0,96,1249	0/0:15,0:14:39.11:0,39,492
chr10	75418819	.	TTA	T	369.23	PASS	AB=1.000;AC=17;AF=0.850;AN=20;DP=150;FS=0.000;HRun=0;HaplotypeScore=24.0725;InbreedingCoeff=0.2270;MQ=76.59;MQ0=1;QD=5.35;VQSLOD=1.7410;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:2.98:21,3,0	./.	./.	0/0:27,0:7:0:0,0,0	./.	./.	./.	0/1:11,0:11:0:0,0,0	./.	1/1:5,0:5:3:26,3,0	./.	1/1:3,0:3:2.84:14,3,0	1/1:3,0:3:5.68:28,6,0	./.	./.	./.	1/1:13,0:15:26.19:163,26,0	1/1:5,10:16:8.86:81,9,0	./.	./.	./.	./.	./.	./.	./.	1/1:3,0:3:3:27,3,0	./.	1/1:9,0:9:13.78:80,14,0
chr10	75420405	.	GAA	G	2345.73	PASS	AB=0.900;AC=13;AF=0.232;AN=56;BaseQRankSum=8.934;DP=440;FS=0.972;HRun=11;HaplotypeScore=84.3533;InbreedingCoeff=0.8743;MQ=71.71;MQ0=3;MQRankSum=-4.688;QD=21.72;ReadPosRankSum=0.662;VQSLOD=3.2759;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:24:47.88:0,48,174	0/0:8,0:8:18.53:0,19,278	0/0:17,0:12:6.20:0,6,79	0/0:13,0:9:8.61:0,9,79	0/0:17,0:19:45.36:0,45,600	0/0:9,0:9:15.04:0,15,210	0/0:8,0:8:18.05:0,18,256	0/0:18,0:19:48.16:0,48,721	1/1:1,9:11:26.80:267,27,0	0/0:16,0:18:41.09:0,41,524	0/0:13,0:13:36.12:0,36,553	1/1:1,22:23:57.14:607,57,0	1/1:2,12:14:33.07:351,33,0	0/1:8,1:9:8.18:8,0,264	0/0:9,0:9:18.04:0,18,255	0/0:7,0:8:21.07:0,21,306	0/0:29,0:28:63.04:0,63,905	0/0:22,0:23:53.63:0,54,765	0/0:13,0:13:33.08:0,33,463	0/0:19,0:19:49.05:0,49,741	0/0:12,0:12:27.55:0,28,382	1/1:3,13:16:39.09:415,39,0	1/1:0,17:19:56.62:567,57,0	1/1:1,15:15:30.07:319,30,0	0/0:16,0:17:35.58:0,36,475	0/0:18,0:19:45.15:0,45,673	0/0:23,0:23:48.49:0,48,718	0/0:12,0:12:33.11:0,33,508
chr10	75420433	.	AGT	A	1761.74	PASS	AB=0.896;AC=35;AF=0.921;AN=38;BaseQRankSum=-2.107;DP=395;FS=2.730;HRun=0;HaplotypeScore=87.7494;InbreedingCoeff=-0.1167;MQ=56.62;MQ0=13;MQRankSum=-1.574;QD=6.31;ReadPosRankSum=1.333;VQSLOD=3.2050;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:25,3:28:40.06:40,0,211	1/1:2,3:5:6.01:63,6,0	./.	./.	1/1:14,3:18:20.91:188,21,0	1/1:2,3:5:3.01:33,3,0	1/1:6,8:14:9.02:98,9,0	./.	./.	1/1:14,0:14:14.85:110,15,0	1/1:5,1:9:5.89:65,6,0	./.	./.	1/1:4,6:12:14.87:144,15,0	1/1:6,3:10:8.85:79,9,0	0/1:6,0:6:15.35:15,0,60	1/1:13,12:26:17.73:176,18,0	1/1:13,4:17:17.91:167,18,0	1/1:17,5:22:14.81:129,15,0	1/1:9,6:16:11.87:112,12,0	1/1:10,6:14:6.02:65,6,0	./.	./.	./.	1/1:7,12:20:17.88:175,18,0	0/1:8,2:9:4.96:55,0,5	1/1:13,6:20:8.10:78,8,0	1/1:8,0:8:8.84:70,9,0
chr10	75420507	.	CGT	C	58.71	PASS	AB=0.986;AC=10;AF=0.185;AN=54;BaseQRankSum=4.159;DP=438;FS=0.000;HRun=0;HaplotypeScore=78.8637;InbreedingCoeff=0.4645;MQ=60.53;MQ0=7;MQRankSum=1.662;QD=0.49;ReadPosRankSum=-4.396;VQSLOD=0.4903;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:86.40:86,0,90	0/0:6,0:6:12.04:0,12,231	0/1:21,0:3:0.86:7,0,1	0/1:19,1:8:8.66:25,0,9	0/0:15,0:15:38.34:0,38,699	0/0:15,0:15:36.12:0,36,694	0/0:40,0:40:99:0,111,2034	0/0:13,0:13:33.56:0,34,570	1/1:8,0:8:2.97:20,3,0	0/0:19,0:19:57.18:0,57,994	0/0:11,0:11:24.03:0,24,361	0/1:17,0:17:0:0,0,0	1/1:10,0:10:3.01:35,3,0	0/0:16,0:16:36.09:0,36,592	0/0:6,0:6:18.06:0,18,346	0/0:9,0:9:27.08:0,27,485	0/0:22,0:22:63.12:0,63,1076	0/0:17,0:17:45.06:0,45,728	0/0:13,0:12:33.08:0,33,553	0/0:12,0:12:30.10:0,30,572	0/0:33,0:31:72.03:0,72,1382	0/1:4,0:4:0:0,0,0	0/1:11,0:11:0.22:0,0,1	./.	0/0:28,0:28:68.90:0,69,1216	0/0:19,0:18:54.18:0,54,985	0/0:16,0:16:45.15:0,45,822	0/0:2,0:2:6.02:0,6,115
chr10	75421808	.	TTTTTTTTTTTTTTTTTG	T	4286.86	PASS	AB=0.664;AC=10;AF=0.179;AN=56;BaseQRankSum=9.355;DP=569;FS=0.634;HRun=0;HaplotypeScore=185.3151;InbreedingCoeff=0.8030;MQ=51.74;MQ0=36;MQRankSum=-6.731;QD=54.96;ReadPosRankSum=6.829;VQSLOD=4.1846;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:15.05:0,15,689	0/0:6,0:5:15.04:0,15,707	0/0:71,0:8:24.08:0,24,652	0/0:67,0:11:21.28:0,21,512	0/0:33,0:31:88.17:0,88,4272	0/0:20,0:19:57.18:0,57,3034	0/0:5,0:5:12.04:0,12,664	0/0:39,0:34:86.09:0,86,3393	1/1:3,7:9:8.88:382,9,0	0/0:26,0:26:69.22:0,69,3448	0/0:23,0:23:63.20:0,63,3630	1/1:12,3:14:14.31:557,14,0	1/1:4,7:11:8.22:267,8,0	0/0:9,0:9:27.08:0,27,1346	0/0:9,0:8:24.08:0,24,1464	0/0:15,0:14:39.12:0,39,2019	0/0:21,0:21:60.19:0,60,3146	0/0:13,0:12:30.10:0,30,1669	0/0:13,0:12:36.12:0,36,1751	0/0:24,0:23:69.24:0,69,3693	0/0:8,0:7:18.06:0,18,1097	0/1:3,8:11:2.24:805,0,2	1/1:1,21:22:39.85:1683,40,0	0/1:6,3:8:2.37:595,0,2	0/0:14,0:13:36.12:0,36,2129	0/0:23,0:23:69.24:0,69,3530	0/0:19,0:16:48.16:0,48,2707	0/0:28,0:27:72.25:0,72,3910
chr10	75421809	.	TTTTTTTTTTTTTTTTGG	T	3845.55	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.576;DP=563;FS=1.371;HRun=0;HaplotypeScore=184.7378;InbreedingCoeff=0.9265;MQ=51.71;MQ0=36;MQRankSum=-7.355;QD=51.27;ReadPosRankSum=7.383;VQSLOD=2.9412;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:15.05:0,15,653	0/0:6,0:5:12.04:0,12,595	0/0:70,0:8:24.07:0,24,526	0/0:67,0:11:21.30:0,21,399	0/0:32,0:30:85.15:0,85,3804	0/0:19,0:18:54.19:0,54,2727	0/0:5,0:5:12.04:0,12,602	0/0:39,0:34:85.82:0,86,3098	1/1:10,0:9:8.92:334,9,0	0/0:25,0:26:66.23:0,66,3009	0/0:22,0:22:60.21:0,60,3295	1/1:5,7:11:14.70:494,15,0	1/1:11,1:12:3.55:247,4,0	0/0:9,0:9:24.08:0,24,1250	0/0:9,0:8:24.08:0,24,1359	0/0:14,0:13:36.11:0,36,1734	0/0:21,0:21:57.17:0,57,2852	0/0:13,0:12:30.10:0,30,1598	0/0:14,0:13:39.13:0,39,1635	0/0:24,0:23:69.24:0,69,3343	0/0:8,0:7:18.06:0,18,996	1/1:11,0:11:20.71:713,21,0	1/1:22,0:22:39.85:1479,40,0	1/1:6,1:7:14.43:579,14,0	0/0:14,0:13:36.12:0,36,1859	0/0:23,0:23:69.24:0,69,3176	0/0:19,0:16:48.16:0,48,2398	0/0:29,0:28:75.26:0,75,3589
chr10	75422561	.	C	CT	918	PASS	AB=0.858;AC=17;AF=0.304;AN=56;BaseQRankSum=1.511;DP=589;FS=0.494;HRun=14;HaplotypeScore=79.3113;InbreedingCoeff=0.1991;MQ=67.36;MQ0=16;MQRankSum=-1.208;QD=3.15;ReadPosRankSum=0.753;VQSLOD=0.1873;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:10.56:0,11,42	0/0:10,1:12:0.37:0,0,115	0/1:50,0:18:4.05:4,0,17	0/1:51,0:17:2.61:16,0,3	0/0:26,0:25:53:0,53,340	0/1:18,2:21:30.15:30,0,184	0/0:13,1:13:8.06:0,8,157	0/0:28,0:28:3.94:0,4,219	1/1:3,7:9:0.93:115,1,0	0/1:18,2:20:8.45:8,0,198	0/0:18,0:19:18.34:0,18,229	1/1:5,5:10:23.57:211,24,0	0/1:5,20:26:15.43:202,0,15	0/0:15,0:15:24.49:0,24,143	0/0:16,0:16:21.98:0,22,185	0/0:15,0:15:38.12:0,38,241	0/0:34,0:34:70.26:0,70,459	0/1:16,2:19:48:48,0,94	0/0:23,0:20:31.87:0,32,226	0/0:21,0:22:22.56:0,23,232	0/0:7,0:7:14.77:0,15,95	1/1:5,8:12:15:131,15,0	1/1:12,12:24:9.76:197,10,0	0/1:3,6:10:7.74:76,0,8	0/1:21,0:21:17.39:17,0,121	0/0:19,0:19:21.31:0,21,197	0/0:15,0:15:24.68:0,25,146	0/1:13,2:16:28.41:28,0,151
chr10	75422567	.	TTTTTTTTTC	T	489.21	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=4.253;DP=585;FS=1.116;HRun=0;HaplotypeScore=145.0482;InbreedingCoeff=0.5810;MQ=66.22;MQ0=18;MQRankSum=-3.004;QD=5.56;ReadPosRankSum=-1.926;VQSLOD=1.9892;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,19:29:26.86:581,27,0	0/0:11,0:11:30.10:0,30,1065	0/0:56,0:19:0.45:0,0,28	0/1:58,0:16:8.58:9,0,10	0/0:24,0:23:51.16:0,51,1527	0/0:23,0:22:54.17:0,54,1745	0/0:13,0:12:33.10:0,33,1046	0/0:28,0:28:51.35:0,51,904	0/0:9,0:8:18.06:0,18,644	0/0:20,0:19:42.14:0,42,1313	0/0:19,0:19:43.03:0,43,1367	0/0:10,0:10:24.08:0,24,793	0/0:25,0:25:37.35:0,37,1213	0/0:13,0:13:24.08:0,24,893	0/0:16,0:15:42.14:0,42,1491	0/0:15,0:15:33.10:0,33,1158	0/0:33,0:32:83.09:0,83,3018	0/0:19,0:19:42.13:0,42,1177	0/0:23,0:20:42.41:0,42,1004	0/0:24,0:24:58.12:0,58,1654	0/0:8,0:8:21.07:0,21,709	0/0:11,0:10:11.99:0,12,380	0/0:21,0:21:36.04:0,36,848	0/0:10,0:10:15.52:0,16,510	0/0:20,0:20:44.95:0,45,823	0/0:19,0:19:42.11:0,42,1144	0/0:14,0:13:27.08:0,27,755	0/0:13,0:13:35.69:0,36,984
chr10	75425319	.	C	CA	868.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.960;DP=468;FS=6.607;HRun=4;HaplotypeScore=41.9122;InbreedingCoeff=0.9444;MQ=75.47;MQ0=0;MQRankSum=0.146;QD=34.76;ReadPosRankSum=0.381;VQSLOD=3.7408;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:72.20:964,72,0	0/0:7,0:7:18.05:0,18,204	0/0:10,0:10:25:0,25,292	0/0:8,0:8:15.03:0,15,160	0/0:28,0:28:78.22:0,78,884	0/0:18,0:18:51.15:0,51,579	0/0:17,0:17:48.10:0,48,524	0/0:17,0:17:39.10:0,39,435	0/0:19,0:19:57.15:0,57,637	0/0:17,0:17:51.15:0,51,579	0/0:15,0:15:39.10:0,39,434	0/0:17,0:17:48.14:0,48,544	0/0:17,0:17:45.13:0,45,510	0/0:15,0:15:42.10:0,42,467	0/0:12,0:12:33.09:0,33,374	0/0:16,0:16:39.11:0,39,442	0/0:21,0:21:54.15:0,54,613	0/0:25,0:25:72.19:0,72,805	0/0:19,0:19:57.16:0,57,646	0/0:17,0:17:51.15:0,51,579	0/0:8,0:8:24.07:0,24,272	0/0:14,0:14:42.11:0,42,468	0/0:17,0:17:48.14:0,48,544	0/0:14,0:14:42.12:0,42,476	0/0:16,0:16:48.14:0,48,545	0/0:24,0:24:69.20:0,69,783	0/0:31,0:31:87.24:0,87,980	0/0:4,0:4:12.03:0,12,136
chr10	75426752	.	T	TTCAGCCC	4861.46	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-5.272;DP=642;FS=5.217;HRun=0;HaplotypeScore=143.3944;InbreedingCoeff=0.9375;MQ=76.52;MQ0=0;MQRankSum=-10.004;QD=40.85;ReadPosRankSum=-1.779;VQSLOD=4.0666;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:99:0,102,2237	0/0:6,0:6:6.02:0,6,139	0/0:26,0:26:12.33:0,12,369	0/0:24,0:22:22.97:0,23,557	0/0:28,0:28:54.18:0,54,1145	0/0:23,0:23:51.13:0,51,1042	0/0:16,0:16:33.10:0,33,717	0/0:23,0:23:33.10:0,33,665	1/1:10,10:23:21.07:778,21,0	0/0:30,0:30:63.21:0,63,1403	0/0:20,0:20:36.12:0,36,835	1/1:9,7:16:27.09:911,27,0	1/1:7,12:20:27.09:967,27,0	0/0:20,0:20:44.66:0,45,971	0/0:40,0:40:87.28:0,87,1947	0/0:31,0:31:63.20:0,63,1408	0/0:26,0:26:57.18:0,57,1275	0/0:16,0:16:37.16:0,37,967	0/0:23,0:23:21.06:0,21,424	0/0:28,0:28:63.18:0,63,1331	0/0:36,0:36:63.18:0,63,1342	1/1:9,20:30:43.39:1261,43,0	1/1:6,10:17:20.65:666,21,0	1/1:9,4:13:9.03:279,9,0	0/0:20,0:20:39.13:0,39,851	0/0:16,0:16:33.10:0,33,723	0/0:24,0:24:54.19:0,54,1217	0/0:2,0:2:6.02:0,6,139
chr10	75427603	.	C	CATAAAT	9336.31	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-4.584;DP=677;FS=1.304;HRun=0;HaplotypeScore=133.8484;InbreedingCoeff=0.9987;MQ=85.74;MQ0=0;MQRankSum=-14.877;QD=79.80;ReadPosRankSum=-1.212;VQSLOD=5.2968;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,2581	0/0:8,0:8:21.07:0,21,505	0/0:24,0:24:32.35:0,32,1152	0/0:23,0:23:66.23:0,66,1517	0/0:19,0:19:57.20:0,57,1371	0/0:30,0:30:87.30:0,87,2066	0/0:23,0:23:69.20:0,69,1558	0/0:38,0:38:99:0,111,2531	1/1:8,9:18:48.16:1331,48,0	0/0:37,0:37:99:0,108,2550	0/0:28,0:28:81.28:0,81,1925	1/1:8,16:26:66.23:2203,66,0	1/1:3,16:23:54.19:1822,54,0	0/0:27,0:27:78.23:0,78,1779	0/0:26,0:26:72.25:0,72,1729	0/0:31,0:31:78.27:0,78,1846	0/0:23,0:23:69.24:0,69,1621	0/0:13,0:13:36.08:0,36,785	0/0:31,0:31:75.26:0,75,1804	0/0:18,0:18:48.16:0,48,1154	0/0:31,0:31:84.29:0,84,1993	1/1:4,11:17:45.15:1387,45,0	1/1:2,16:20:54.14:1781,54,0	1/1:2,9:13:24.08:812,24,0	0/0:16,0:16:48.16:0,48,1154	0/0:26,0:26:78.27:0,78,1854	0/0:37,0:37:99:0,108,2575	0/0:13,0:13:39.13:0,39,881
chr10	75427930	.	CCA	C	40.80	PASS	AB=0.962;AC=14;AF=0.259;AN=54;BaseQRankSum=1.309;DP=184;FS=12.968;HRun=0;HaplotypeScore=37.5109;InbreedingCoeff=0.0266;MQ=104.69;MQ0=3;MQRankSum=0.250;QD=0.55;ReadPosRankSum=1.693;VQSLOD=-0.3494;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:5:5.96:6,0,14	0/0:4,0:4:2.93:0,3,24	0/0:24,0:15:9.16:0,9,166	0/0:26,0:20:19.22:0,19,185	0/1:2,3:5:15.33:41,0,15	0/0:4,0:4:2.98:0,3,23	0/0:6,0:6:5.96:0,6,32	0/1:8,0:8:9.52:10,0,67	0/1:7,0:7:5.33:5,0,43	0/0:5,0:5:11.80:0,12,92	0/0:7,0:7:5.85:0,6,47	0/0:2,0:2:5.98:0,6,47	0/1:6,0:6:4.98:15,0,5	0/0:9,0:9:12.28:0,12,109	0/1:5,0:5:5.34:12,0,5	0/1:8,0:8:0.06:0,0,45	0/0:5,0:5:3.01:0,3,34	0/0:5,0:5:7.18:0,7,54	0/0:4,0:4:9:0,9,83	0/1:3,0:3:0:0,0,0	0/1:4,0:4:0.45:1,0,0	0/0:2,0:1:2.99:0,3,24	0/1:3,0:3:0:0,0,0	1/1:4,0:4:5.05:21,5,0	0/1:4,0:4:3.95:5,0,4	0/0:7,0:6:5:0,5,50	0/1:11,1:12:46.20:46,0,53	./.
chr10	75427931	.	CA	C	322.69	PASS	AB=0.929;AC=19;AF=0.352;AN=54;BaseQRankSum=1.853;DP=179;FS=8.617;HRun=1;HaplotypeScore=34.9005;InbreedingCoeff=-0.0540;MQ=105.74;MQ0=3;MQRankSum=-0.256;QD=3.55;ReadPosRankSum=3.700;VQSLOD=-0.1971;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:4:12.75:27,0,13	0/0:3,0:3:2.99:0,3,24	0/0:24,0:15:8.16:0,8,121	0/0:26,0:20:4.78:0,5,131	0/1:5,0:5:15.36:27,0,15	0/0:4,0:4:2.49:0,2,23	0/0:5,0:5:2.16:0,2,25	0/1:8,0:8:16.34:16,0,57	0/1:7,0:7:15.82:30,0,16	0/0:6,0:6:7.23:0,7,76	0/0:6,0:6:5.89:0,6,47	0/0:2,0:2:5.98:0,6,47	0/1:6,0:6:2.85:30,0,3	0/1:9,0:9:34.66:35,0,74	1/1:3,2:5:11.65:68,12,0	0/1:4,4:8:11.29:11,0,34	0/1:5,0:5:12.78:13,0,17	0/1:5,0:5:9.12:9,0,13	0/0:4,0:4:8.92:0,9,67	0/1:3,0:3:0:0,0,0	0/1:1,3:4:4.02:12,0,4	0/0:2,0:1:2.99:0,3,24	0/1:3,0:3:0:0,0,0	1/1:4,0:4:5.99:57,6,0	1/1:5,0:5:7.97:36,8,0	0/0:6,0:5:4.88:0,5,50	0/1:8,2:10:25.73:97,0,26	./.
chr10	75428099	.	T	TTC	300.60	PASS	AB=0.948;AC=15;AF=0.326;AN=46;BaseQRankSum=-2.439;DP=373;FS=9.581;HRun=0;HaplotypeScore=78.4814;InbreedingCoeff=0.1042;MQ=63.91;MQ0=12;MQRankSum=0.055;QD=1.51;ReadPosRankSum=-0.929;VQSLOD=0.5966;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:25:0.18:57,0,0	./.	./.	./.	0/0:10,0:12:2.73:0,3,14	0/1:17,1:19:8.12:38,0,8	1/1:23,0:23:5.48:67,5,0	1/1:33,0:33:5.81:48,6,0	0/0:5,0:8:8.52:0,9,42	0/0:14,0:13:2.16:0,2,13	0/0:4,0:4:3.01:0,3,32	0/0:5,0:7:8.48:0,8,41	0/0:6,0:7:5.68:0,6,28	0/0:5,0:5:2.95:0,3,19	1/1:7,2:9:3.01:44,3,0	0/1:13,0:12:13:13,0,26	0/1:24,3:28:23.79:43,0,24	0/0:13,0:15:5.88:0,6,37	0/1:14,2:16:17.35:70,0,17	./.	0/0:17,0:17:6.12:0,6,40	./.	0/0:6,0:8:5.68:0,6,28	0/1:12,0:15:17.96:18,0,24	1/1:15,0:15:3.01:36,3,0	0/0:12,0:12:5.36:0,5,27	0/0:7,0:7:5.99:0,6,55	0/0:5,0:5:2.98:0,3,32
chr10	75428159	.	C	CTT	1213.69	PASS	AB=0.992;AC=15;AF=0.278;AN=54;BaseQRankSum=3.008;DP=422;FS=1.265;HRun=10;HaplotypeScore=72.8166;InbreedingCoeff=0.7577;MQ=72.02;MQ0=13;MQRankSum=-1.816;QD=7.31;ReadPosRankSum=-1.757;VQSLOD=-0.2229;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:19:44.14:0,44,438	./.	0/1:48,0:23:1.08:1,0,176	0/1:39,0:15:29.83:30,0,52	0/0:14,0:15:18.30:0,18,183	0/0:14,0:14:35.63:0,36,347	0/0:18,0:19:47.80:0,48,469	0/0:16,0:17:26.75:0,27,321	1/1:3,7:9:15.05:223,15,0	0/0:15,0:15:42.08:0,42,426	0/1:13,0:13:0.23:0,0,184	1/1:5,3:13:23.96:248,24,0	1/1:4,7:12:6.89:128,7,0	0/0:12,0:12:27.01:0,27,275	0/0:15,0:15:26.95:0,27,268	0/0:12,0:14:23.75:0,24,289	0/0:20,0:20:31.45:0,31,406	0/0:13,0:13:33.05:0,33,336	0/0:10,0:10:20.97:0,21,202	0/0:9,0:9:19.77:0,20,211	0/0:12,0:12:27.04:0,27,275	1/1:1,9:10:27.48:353,27,0	1/1:3,4:7:9.50:135,10,0	1/1:3,8:12:19.78:272,20,0	0/0:7,0:7:17.77:0,18,164	0/0:18,0:19:20.66:0,21,266	0/0:13,0:13:27.01:0,27,274	0/0:8,0:11:14.76:0,15,197
chr10	75430342	.	G	GT	1993.02	PASS	AB=0.611;AC=11;AF=0.196;AN=56;BaseQRankSum=2.386;DP=589;FS=2.045;HRun=10;HaplotypeScore=69.5703;InbreedingCoeff=0.8561;MQ=74.07;MQ0=4;MQRankSum=-4.244;QD=22.39;ReadPosRankSum=0.706;VQSLOD=4.5845;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,2:36:23.98:0,24,587	0/0:5,0:5:11.98:0,12,99	0/0:37,0:20:44.94:0,45,292	0/0:32,0:18:9.80:0,10,89	0/0:22,0:22:62.89:0,63,513	0/0:15,0:16:40.94:0,41,321	0/0:11,0:11:29.94:0,30,243	0/0:30,1:31:11.63:0,12,419	1/1:5,15:21:57.48:589,57,0	0/0:24,1:26:32.96:0,33,467	0/0:31,1:32:57.89:0,58,682	1/1:4,9:14:35.58:358,36,0	1/1:8,9:17:34.88:355,35,0	0/0:17,0:17:44.41:0,44,345	0/0:21,0:22:58.91:0,59,467	0/0:21,1:23:32.98:0,33,466	0/0:26,0:28:70.93:0,71,569	0/0:7,0:7:20.98:0,21,172	0/0:23,0:23:58.82:0,59,460	0/0:23,0:23:65.92:0,66,541	0/0:12,0:12:29.94:0,30,243	0/1:4,7:11:22.21:197,0,22	1/1:4,17:21:51.13:542,51,0	1/1:0,5:4:12.03:128,12,0	0/0:25,0:25:68.25:0,68,583	0/0:26,1:27:37.15:0,37,507	0/0:28,0:28:80.81:0,81,655	0/0:13,0:13:35.96:0,36,296
chr10	75430378	.	C	CT	1204.49	PASS	AB=0.774;AC=12;AF=0.214;AN=56;BaseQRankSum=3.927;DP=549;FS=1.098;HRun=10;HaplotypeScore=67.9108;InbreedingCoeff=0.6159;MQ=69.62;MQ0=1;MQRankSum=-3.578;QD=9.06;ReadPosRankSum=-2.593;VQSLOD=1.9395;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:34:20.05:0,20,477	0/0:3,0:4:8.02:0,8,55	0/0:24,0:12:19.92:0,20,132	0/0:24,0:14:16.73:0,17,139	0/0:25,0:25:56.89:0,57,463	0/0:17,0:17:50.93:0,51,416	0/0:11,0:12:34.93:0,35,265	0/1:21,2:23:18.81:19,0,273	1/1:5,9:15:32.66:288,33,0	0/0:28,1:29:25.56:0,26,405	0/0:27,0:27:56.83:0,57,460	1/1:7,3:10:15.02:147,15,0	1/1:7,11:19:32.86:308,33,0	0/0:20,0:20:44.11:0,44,351	0/0:21,0:22:58.87:0,59,461	0/0:26,0:27:67.88:0,68,535	0/0:23,0:24:58.95:0,59,474	0/0:7,0:7:14.98:0,15,123	0/1:26,1:26:14.33:14,0,270	0/0:22,0:22:56.85:0,57,457	0/0:12,0:12:32.83:0,33,256	0/1:2,8:10:0.61:182,0,1	0/1:8,10:19:29.98:248,0,30	1/1:3,7:10:17.99:172,18,0	0/0:22,0:23:55.94:0,56,444	0/0:22,0:22:62.26:0,62,493	0/0:30,0:30:74.81:0,75,605	0/0:11,0:11:23.93:0,24,193
chr10	75430679	.	AT	A	871.56	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.568;DP=484;FS=2.623;HRun=3;HaplotypeScore=49.8324;InbreedingCoeff=0.9637;MQ=79.05;MQ0=0;MQRankSum=-4.232;QD=27.24;ReadPosRankSum=1.374;VQSLOD=2.6828;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:78.24:966,78,0	0/0:6,0:6:15.05:0,15,213	0/0:18,0:17:41.33:0,41,533	0/0:10,0:10:22.42:0,22,291	0/0:29,0:29:87.28:0,87,1236	0/0:17,0:17:51.16:0,51,716	0/0:10,0:10:30.09:0,30,414	0/0:23,0:23:69.22:0,69,978	0/0:10,0:10:30.10:0,30,431	0/0:27,0:27:81.26:0,81,1134	0/0:25,0:25:66.21:0,66,933	0/0:18,0:18:54.17:0,54,759	0/0:16,0:16:48.14:0,48,671	0/0:10,0:10:30.10:0,30,430	0/0:11,0:10:33.11:0,33,474	0/0:7,0:7:18.06:0,18,259	0/0:26,0:26:78.25:0,78,1106	0/0:20,0:20:57.17:0,57,801	0/0:11,0:11:27.09:0,27,389	0/0:24,0:24:69.22:0,69,975	0/0:15,0:15:42.14:0,42,605	0/0:15,0:15:45.15:0,45,647	0/0:17,0:17:45.15:0,45,648	0/0:18,0:18:51.17:0,51,734	0/0:23,0:23:69.23:0,69,993	0/0:24,0:24:63.20:0,63,876	0/0:16,0:16:48.16:0,48,689	0/0:6,0:6:18.06:0,18,256
chr10	75431769	.	G	GA	2913.80	PASS	AB=0.857;AC=15;AF=0.268;AN=56;BaseQRankSum=-6.748;DP=594;FS=0.397;HRun=10;HaplotypeScore=68.8903;InbreedingCoeff=0.8944;MQ=65.40;MQ0=9;MQRankSum=-1.198;QD=16.01;ReadPosRankSum=0.897;VQSLOD=4.0426;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,35:42:32.05:704,32,0	0/0:12,0:12:35.93:0,36,291	0/0:13,0:11:28.97:0,29,224	0/0:8,0:8:18.86:0,19,150	0/0:30,0:30:62.78:0,63,508	0/0:22,1:23:12.93:0,13,313	0/0:28,0:27:70.94:0,71,570	0/0:25,0:26:73.92:0,74,592	1/1:1,20:21:44.98:451,45,0	0/0:13,0:13:26.43:0,26,203	0/0:13,0:13:29.75:0,30,232	1/1:5,16:21:42.82:432,43,0	1/1:7,13:22:17.13:356,17,0	0/0:21,0:21:21.88:0,22,378	0/0:22,0:22:53.92:0,54,441	0/0:22,0:22:53.93:0,54,443	0/0:41,0:41:99:0,114,928	0/0:24,0:24:61.42:0,61,469	0/0:25,0:25:52.96:0,53,423	0/0:16,0:16:38.94:0,39,320	0/1:14,3:18:49.02:49,0,244	1/1:7,12:19:32.94:322,33,0	1/1:3,8:11:15.01:160,15,0	1/1:2,25:27:60.15:640,60,0	0/0:24,0:24:44.18:0,44,368	0/0:24,0:22:20.56:0,21,345	0/0:19,0:19:44.92:0,45,369	0/0:6,0:5:14.98:0,15,123
chr10	75435054	.	G	GTGC	5683.78	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-12.656;DP=612;FS=1.387;HRun=0;HaplotypeScore=80.9456;InbreedingCoeff=0.9785;MQ=76.78;MQ0=0;MQRankSum=-2.979;QD=51.67;ReadPosRankSum=4.520;VQSLOD=6.8935;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,111,1714	0/0:2,0:2:6.02:0,6,96	0/0:16,0:16:42.13:0,42,653	0/0:21,0:21:54.18:0,54,840	0/0:24,0:24:63.21:0,63,1012	0/0:21,0:21:63.21:0,63,1012	0/0:29,0:29:81.28:0,81,1298	0/0:29,0:29:78.26:0,78,1227	1/1:2,12:16:36.12:790,36,0	0/0:30,0:30:87.28:0,87,1353	0/0:21,0:21:60.19:0,60,938	1/1:3,26:30:69.24:1520,69,0	1/1:0,23:24:66.23:1456,66,0	0/0:25,0:25:72.21:0,72,1106	0/0:28,0:28:78.27:0,78,1252	0/0:14,0:14:42.14:0,42,675	0/0:30,0:30:90.23:0,90,1368	0/0:26,0:26:75.26:0,75,1205	0/0:21,0:21:63.21:0,63,1011	0/0:16,0:16:48.15:0,48,749	0/0:30,0:30:90.26:0,90,1371	1/1:1,11:12:27.09:596,27,0	1/1:0,9:10:27.09:595,27,0	1/1:2,16:18:33.11:726,33,0	0/0:15,0:15:45.15:0,45,721	0/0:26,0:26:75.23:0,75,1160	0/0:20,0:19:57.17:0,57,891	0/0:15,0:15:42.14:0,42,675
chr10	75436185	.	CTT	C	2877.14	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.257;DP=631;FS=2.879;HRun=13;HaplotypeScore=79.4073;InbreedingCoeff=0.9743;MQ=66.75;MQ0=6;MQRankSum=-0.794;QD=18.93;ReadPosRankSum=4.583;VQSLOD=3.3231;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:20:42.03:407,42,0	0/0:12,0:15:35.43:0,35,435	0/0:25,0:13:8.15:0,8,192	0/0:20,0:11:9.26:0,9,120	0/0:28,0:34:70.02:0,70,856	0/0:19,0:19:48.15:0,48,665	0/0:17,0:18:38.25:0,38,454	0/0:22,0:25:56.63:0,57,714	1/1:1,22:22:57.09:553,57,0	0/0:33,0:36:82.04:0,82,1107	0/0:26,0:28:72.20:0,72,957	1/1:5,14:18:39:378,39,0	1/1:7,21:27:51.06:495,51,0	0/0:26,0:26:75.24:0,75,1059	0/0:20,0:20:50.23:0,50,647	0/0:15,0:19:47.62:0,48,626	0/0:20,1:22:21.55:0,22,627	0/0:21,0:22:47.61:0,48,630	0/0:12,0:13:29.59:0,30,395	0/0:36,0:37:61.21:0,61,1138	0/0:9,0:10:26.57:0,27,337	1/1:2,24:26:60.03:582,60,0	1/1:2,21:23:41.99:457,42,0	1/1:1,11:12:21.02:204,21,0	0/0:32,0:32:78.22:0,78,1051	0/0:23,0:23:60.18:0,60,829	0/0:24,0:25:66.16:0,66,880	0/0:9,0:9:18.06:0,18,261
chr10	75436934	.	CCTTTTAATGTATATCT	C	10785.68	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.823;DP=564;FS=4.071;HRun=0;HaplotypeScore=247.4831;InbreedingCoeff=0.9951;MQ=87.50;MQ0=0;MQRankSum=-12.805;QD=91.40;ReadPosRankSum=4.240;VQSLOD=4.5270;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.19:0,66,4154	0/0:8,0:8:21.07:0,21,1648	0/0:23,0:23:66.20:0,66,3317	0/0:19,0:19:48.14:0,48,2511	0/0:18,0:18:45.15:0,45,3103	0/0:18,0:18:51.16:0,51,3603	0/0:15,0:15:39.13:0,39,2324	0/0:31,0:31:87.28:0,87,5409	1/1:4,21:25:54.18:2455,54,0	0/0:25,0:25:75.25:0,75,5570	0/0:18,0:18:54.19:0,54,3982	1/1:7,20:27:57.19:2656,57,0	1/1:0,19:19:50.97:2333,51,0	0/0:20,0:20:57.20:0,57,3749	0/0:24,0:24:72.25:0,72,5304	0/0:28,0:28:81.27:0,81,5645	0/0:11,0:11:30.10:0,30,1743	0/0:22,0:22:66.21:0,66,4464	0/0:18,0:18:51.17:0,51,3288	0/0:28,0:28:84.22:0,84,5558	0/0:12,0:12:33.10:0,33,2131	1/1:1,18:19:38.89:1515,39,0	1/1:2,11:13:26.62:1127,27,0	1/1:6,9:15:15.05:699,15,0	0/0:20,0:20:57.15:0,57,3705	0/0:28,0:28:84.28:0,84,6401	0/0:27,0:27:81.28:0,81,5911	0/0:9,0:9:24.08:0,24,1622
chr10	75441406	.	A	AT	2489.57	PASS	AB=0.902;AC=18;AF=0.321;AN=56;BaseQRankSum=-6.481;DP=459;FS=1.418;HRun=11;HaplotypeScore=43.8165;InbreedingCoeff=0.7846;MQ=68.11;MQ0=0;MQRankSum=-0.033;QD=17.41;ReadPosRankSum=1.748;VQSLOD=4.4457;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:45.09:457,45,0	0/0:4,0:4:11.95:0,12,93	1/1:5,0:4:1.25:3,1,0	0/0:7,0:7:8.25:0,8,66	0/0:26,0:26:68.52:0,69,513	0/0:20,0:20:32.88:0,33,394	0/0:7,0:7:17.91:0,18,139	0/0:24,0:24:53.75:0,54,418	1/1:2,12:14:36.07:362,36,0	0/0:19,0:19:47.80:0,48,372	0/0:22,0:23:64.75:0,65,489	1/1:1,11:12:30.06:304,30,0	1/1:0,20:20:45.09:456,45,0	0/0:14,0:14:29.87:0,30,232	0/0:14,0:15:37.88:0,38,282	0/0:23,0:23:62.69:0,63,481	0/0:18,0:18:44.82:0,45,348	0/0:21,1:22:7.73:0,8,325	0/0:17,0:17:41.78:0,42,320	0/0:17,0:17:50.79:0,51,392	0/1:15,2:17:22.06:22,0,214	1/1:1,14:15:18.74:348,19,0	1/1:4,16:20:45.09:457,45,0	1/1:2,10:12:27.05:274,27,0	0/1:9,1:10:0.55:1,0,179	0/0:20,0:20:56.78:0,57,441	0/0:28,0:28:71.67:0,72,552	0/0:11,1:12:2.44:0,2,202
chr10	75441921	.	TGCGCGCGC	T	688.25	PASS	AB=0.917;AC=11;AF=0.212;AN=52;BaseQRankSum=4.129;DP=432;FS=6.122;HRun=0;HaplotypeScore=109.6479;InbreedingCoeff=0.7049;MQ=48.34;MQ0=26;MQRankSum=0.171;QD=7.24;ReadPosRankSum=-0.139;VQSLOD=0.9549;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:22:9.06:70,9,0	0/0:5,0:5:15.05:0,15,364	./.	./.	0/0:18,0:17:27.09:0,27,781	0/0:19,0:17:41.56:0,42,1299	0/0:15,0:14:21.54:0,22,676	0/0:11,0:9:3.01:0,3,70	1/1:8,3:12:1.82:5,2,0	0/0:23,0:21:30.50:0,30,1221	0/0:12,0:12:17.99:0,18,405	1/1:4,0:10:15.03:187,15,0	0/1:10,0:10:6.15:72,0,6	0/0:17,0:17:18.06:0,18,556	0/0:14,0:13:24.08:0,24,699	0/0:7,0:6:12.04:0,12,373	0/0:33,0:30:60.21:0,60,1758	0/0:30,0:28:66.21:0,66,1933	0/0:19,0:15:33.08:0,33,878	0/0:11,0:10:15.05:0,15,469	0/0:28,0:25:36.59:0,37,1081	0/0:12,7:19:2.98:0,3,21	1/1:7,8:14:1.55:5,2,0	1/1:20,1:21:21.04:494,21,0	0/0:13,0:12:18.06:0,18,512	0/0:14,0:14:27.09:0,27,721	0/0:13,0:11:20.64:0,21,432	0/0:15,0:13:27.07:0,27,685
chr10	75446246	.	A	AATT	619.42	PASS	AC=8;AF=0.174;AN=46;BaseQRankSum=-2.208;DP=269;FS=3.874;HRun=0;HaplotypeScore=44.2320;InbreedingCoeff=0.6074;MQ=59.65;MQ0=1;MQRankSum=0.665;QD=18.22;ReadPosRankSum=-0.753;VQSLOD=2.7677;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,12:18:25.81:639,26,0	0/0:4,0:4:12.04:0,12,164	0/0:5,0:3:3.01:0,3,35	./.	0/0:13,0:13:21.06:0,21,271	0/0:22,0:23:42.09:0,42,537	0/0:2,0:2:3.01:0,3,41	0/0:35,0:35:30.08:0,30,380	1/1:6,0:6:6.02:71,6,0	0/0:13,0:13:18.06:0,18,246	0/0:7,0:8:12.01:0,12,144	./.	1/1:4,0:4:1.55:4,2,0	0/0:4,0:4:9.03:0,9,123	0/0:2,0:2:6.02:0,6,82	0/0:7,0:7:3.01:0,3,41	0/0:25,0:26:54.08:0,54,678	0/0:18,0:18:26.67:0,27,339	0/0:16,0:16:24.07:0,24,315	./.	0/0:2,0:2:3.01:0,3,41	./.	1/1:6,0:6:3:25,3,0	./.	0/0:13,0:14:21.04:0,21,267	0/0:13,0:13:12.04:0,12,164	0/0:13,0:13:18.06:0,18,246	0/0:9,0:9:21.07:0,21,287
chr10	75449429	.	GC	G	3228.29	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.553;DP=554;FS=2.318;HRun=6;HaplotypeScore=56.5728;InbreedingCoeff=0.9918;MQ=66.67;MQ0=0;MQRankSum=-0.719;QD=25.03;ReadPosRankSum=2.235;VQSLOD=3.7443;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.27:0,90,1158	0/0:10,0:10:30.08:0,30,367	0/0:18,0:17:44.94:0,45,526	0/0:17,1:18:33.90:0,34,570	0/0:18,0:18:51.15:0,51,656	0/0:27,0:27:78.21:0,78,994	0/0:15,0:15:42.14:0,42,552	0/0:27,0:27:66.20:0,66,853	1/1:3,21:24:57.14:612,57,0	0/0:17,0:17:51.16:0,51,658	0/0:12,0:12:33.08:0,33,415	1/1:0,15:15:42.11:451,42,0	1/1:2,27:29:60.15:645,60,0	0/0:17,0:17:48.16:0,48,630	0/0:21,0:21:63.20:0,63,817	0/0:7,0:7:18.06:0,18,237	0/0:24,0:24:69.22:0,69,907	0/0:27,0:27:72.11:0,72,890	0/0:22,0:22:63.20:0,63,827	0/0:20,0:20:57.17:0,57,740	0/0:38,0:38:99:0,114,1471	1/1:0,17:17:42.11:451,42,0	1/1:0,19:19:45.11:483,45,0	1/1:0,25:25:72.18:774,72,0	0/0:10,0:10:30.10:0,30,394	0/0:19,0:19:57.18:0,57,737	0/0:23,0:22:69.22:0,69,903	0/0:4,0:4:12.04:0,12,158
chr10	75452887	.	GGTTTT	G	2194.66	PASS	AB=0.952;AC=13;AF=0.241;AN=54;BaseQRankSum=7.770;DP=676;FS=0.591;HRun=0;HaplotypeScore=126.0256;InbreedingCoeff=0.7912;MQ=70.37;MQ0=8;MQRankSum=-0.239;QD=16.88;ReadPosRankSum=0.381;VQSLOD=3.4159;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:44:60.21:0,60,1272	0/0:7,0:7:21.07:0,21,579	./.	0/0:45,0:29:0.47:0,0,1	0/0:29,0:29:4.58:0,5,1227	0/0:13,0:13:18.06:0,18,458	0/0:21,0:21:21.07:0,21,522	0/0:35,0:35:12.03:0,12,144	1/1:6,11:17:18.06:320,18,0	0/0:23,0:23:48.15:0,48,1131	0/0:22,0:22:36.12:0,36,905	1/1:8,8:16:6.02:107,6,0	1/1:6,10:16:33.11:587,33,0	0/0:13,0:13:27.09:0,27,605	0/0:18,0:18:42.14:0,42,1091	0/0:24,0:24:36.12:0,36,961	0/0:32,0:32:63.21:0,63,1544	0/1:19,1:19:23.28:23,0,652	0/0:39,0:39:39.13:0,39,1013	0/0:27,0:27:45.15:0,45,1236	0/0:31,0:31:51.16:0,51,1298	1/1:4,6:10:12.04:214,12,0	1/1:9,6:15:9.03:160,9,0	1/1:16,20:36:54.16:959,54,0	0/0:32,0:32:39.13:0,39,982	0/0:21,0:21:24.08:0,24,652	0/0:39,0:39:78.27:0,78,2093	0/0:4,0:4:9.03:0,9,250
chr10	75459172	.	T	TATA	233.48	PASS	AC=8;AF=0.160;AN=50;BaseQRankSum=-2.713;DP=180;FS=3.474;HRun=0;HaplotypeScore=25.7177;InbreedingCoeff=0.4669;MQ=72.26;MQ0=0;MQRankSum=0.377;QD=17.96;ReadPosRankSum=1.947;VQSLOD=3.0143;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:30.03:0,30,381	0/0:5,0:5:6.02:0,6,85	0/0:7,0:5:2.60:0,3,10	0/0:9,0:6:3:0,3,27	0/0:8,0:8:12.04:0,12,170	0/0:6,0:6:9.03:0,9,128	0/0:4,0:4:6.02:0,6,85	0/0:28,0:28:57.19:0,57,787	1/1:1,1:2:3.01:61,3,0	0/0:4,0:4:6.01:0,6,70	./.	1/1:0,2:2:3.01:61,3,0	1/1:4,4:8:9.03:182,9,0	0/0:3,0:3:9.03:0,9,128	0/0:4,0:4:6.02:0,6,84	0/0:3,0:3:6.02:0,6,85	0/0:23,0:23:57.16:0,57,773	0/0:16,0:16:36.09:0,36,482	0/0:6,0:6:9.03:0,9,126	0/0:7,0:7:9.03:0,9,127	0/0:3,0:3:3.01:0,3,43	0/0:2,0:2:3.01:0,3,43	1/1:1,0:1:3.01:50,3,0	./.	./.	0/0:4,0:4:3.48:0,3,119	0/0:7,0:7:15.05:0,15,213	0/0:6,0:6:12.04:0,12,170
chr10	75460274	.	CTTTGTTTTTGTTTT	C	641.34	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=4.013;DP=515;FS=6.502;HRun=0;HaplotypeScore=196.4839;InbreedingCoeff=0.9564;MQ=71.66;MQ0=0;MQRankSum=-4.109;QD=30.54;ReadPosRankSum=0.269;VQSLOD=2.3352;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,14:21:18.06:732,18,0	0/0:7,0:7:21.06:0,21,1271	0/0:23,0:20:46.93:0,47,1554	0/0:14,0:11:27.09:0,27,1343	0/0:27,0:27:81.28:0,81,5295	0/0:19,0:19:51.18:0,51,2949	0/0:18,0:18:51.18:0,51,3234	0/0:33,0:33:72.24:0,72,3950	0/0:19,0:19:57.20:0,57,3153	0/0:26,0:26:75.26:0,75,4229	0/0:22,0:22:63.22:0,63,3699	0/0:19,0:19:51.18:0,51,3071	0/0:19,0:19:51.16:0,51,2771	0/0:20,0:20:57.20:0,57,3110	0/0:18,0:18:51.18:0,51,3334	0/0:19,0:19:51.17:0,51,2825	0/0:23,0:23:54.19:0,54,3446	0/0:13,0:14:39.09:0,39,2270	0/0:22,0:22:57.20:0,57,3290	0/0:19,0:19:57.17:0,57,3159	0/0:11,0:11:27.09:0,27,1774	./.	0/0:13,0:13:39.13:0,39,2577	0/0:19,0:19:57.20:0,57,3569	0/0:19,0:19:48.16:0,48,2921	0/0:17,0:17:42.14:0,42,2570	0/0:29,0:28:81.25:0,81,5091	0/0:4,0:4:12.04:0,12,825
chr10	75461726	.	TAC	T	265.73	PASS	AB=0.902;AC=15;AF=0.300;AN=50;BaseQRankSum=5.926;DP=441;FS=16.670;HRun=0;HaplotypeScore=66.2320;InbreedingCoeff=0.2645;MQ=61.51;MQ0=9;MQRankSum=-4.148;QD=1.75;ReadPosRankSum=0.205;VQSLOD=0.0478;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:36.50:0,36,392	0/0:6,0:6:8.99:0,9,90	./.	./.	0/0:15,0:14:18:0,18,199	0/0:18,0:18:16.90:0,17,175	0/0:22,0:22:4.33:0,4,231	./.	1/1:10,0:10:5.68:28,6,0	0/0:11,0:11:12.03:0,12,143	0/1:11,2:12:20.27:20,0,118	0/1:13,0:13:0.28:64,0,0	1/1:15,0:15:8.52:42,9,0	0/0:9,0:9:15:0,15,152	0/1:9,3:12:37.77:38,0,235	0/1:8,5:14:52.76:53,0,59	0/1:18,2:20:37.13:37,0,165	0/1:15,0:15:25.54:26,0,38	0/0:16,0:16:6.01:0,6,72	0/0:16,0:16:23.53:0,24,259	0/0:29,0:28:23.91:0,24,245	1/1:12,0:12:8.52:42,9,0	1/1:13,0:13:14.06:67,14,0	0/1:15,0:15:8.10:8,0,17	0/0:11,0:11:12.02:0,12,157	0/0:11,0:11:12.03:0,12,143	0/0:19,0:19:5.81:0,6,304	0/0:3,0:3:9.01:0,9,111
chr10	75461765	.	ACACACACC	A	1748.41	PASS	AB=0.795;AC=12;AF=0.214;AN=56;BaseQRankSum=5.690;DP=548;FS=0.000;HRun=0;HaplotypeScore=128.1331;InbreedingCoeff=0.6114;MQ=60.99;MQ0=24;MQRankSum=-4.687;QD=13.55;ReadPosRankSum=1.002;VQSLOD=2.4846;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:33:99:164,0,938	0/0:7,0:7:21.04:0,21,452	0/0:35,0:11:33.07:0,33,346	0/0:34,0:16:44.70:0,45,441	0/0:27,0:26:44.94:0,45,1376	0/0:21,0:21:54.93:0,55,1073	0/0:19,0:19:54.07:0,54,1272	0/0:17,0:16:48.02:0,48,462	1/1:2,9:10:5.92:173,6,0	0/0:21,0:20:60.16:0,60,1340	0/0:17,0:17:36:0,36,690	1/1:3,18:21:20.80:463,21,0	1/1:1,15:15:7.75:257,8,0	0/0:17,0:17:42.10:0,42,1156	0/0:21,0:21:60.12:0,60,1526	0/0:22,0:22:54.03:0,54,1158	0/0:20,0:20:53.94:0,54,1134	0/0:11,0:10:16.54:0,17,362	0/0:23,0:21:59.52:0,60,762	0/0:19,0:19:53.57:0,54,1450	0/0:20,0:19:51.09:0,51,1139	0/1:4,9:13:62.72:235,0,63	1/1:2,18:20:0.33:411,0,0	1/1:13,1:14:0.07:198,0,0	0/0:16,0:16:45.10:0,45,1177	0/0:18,0:18:53.07:0,53,950	0/0:22,0:22:63.09:0,63,1613	0/0:12,0:12:36.03:0,36,688
chr10	75464223	.	GA	G	835.14	PASS	AB=0.938;AC=19;AF=0.339;AN=56;BaseQRankSum=5.337;DP=537;FS=0.000;HRun=13;HaplotypeScore=64.2835;InbreedingCoeff=0.4534;MQ=75.67;MQ0=6;MQRankSum=-1.953;QD=4.07;ReadPosRankSum=2.958;VQSLOD=0.4372;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:33:58.63:0,59,675	0/1:7,1:8:6.88:7,0,101	0/0:37,0:22:30.77:0,31,193	0/1:21,0:15:1.62:2,0,24	0/1:16,1:18:9.45:9,0,210	0/0:20,0:20:27.35:0,27,400	0/0:19,2:21:11.16:0,11,421	0/0:26,0:28:34.95:0,35,445	1/1:4,10:14:0.27:130,0,0	0/0:10,0:11:12.72:0,13,137	0/0:17,0:17:11.15:0,11,266	1/1:4,9:13:20.85:153,21,0	1/1:3,13:16:29.76:214,30,0	0/1:16,2:18:8.05:8,0,218	0/0:14,1:15:8.95:0,9,225	0/0:18,0:18:42.04:0,42,392	0/0:38,1:39:67.89:0,68,750	0/0:12,0:13:18.87:0,19,189	0/1:20,0:22:27.39:27,0,268	0/0:19,0:19:26.21:0,26,312	0/0:17,0:17:25.40:0,25,336	1/1:2,12:15:22.82:159,23,0	1/1:7,8:15:17.60:131,18,0	1/1:3,10:14:23.74:168,24,0	0/1:19,2:21:4.81:5,0,262	0/0:22,0:23:28.34:0,28,449	0/0:17,2:20:6.93:0,7,333	0/1:8,0:8:2.44:2,0,111
chr10	75467939	.	A	AT	712.05	PASS	AB=0.727;AC=12;AF=0.214;AN=56;BaseQRankSum=-3.576;DP=442;FS=0.000;HRun=14;HaplotypeScore=54.3299;InbreedingCoeff=0.1563;MQ=73.90;MQ0=0;MQRankSum=-1.161;QD=4.62;ReadPosRankSum=-0.636;VQSLOD=0.9049;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,15:28:12.80:268,0,13	0/0:7,0:7:17.73:0,18,115	0/0:18,0:16:3.13:0,3,39	0/0:18,0:13:1.74:0,2,30	0/1:19,3:24:4.39:4,0,212	0/0:11,1:14:1.37:0,1,120	0/0:7,0:9:18.83:0,19,108	0/0:32,0:34:39.20:0,39,238	1/1:6,12:18:17.99:156,18,0	0/0:16,0:17:22.58:0,23,140	0/1:18,2:22:13.23:13,0,164	0/1:4,3:15:4.58:66,0,5	0/1:3,7:10:9.77:44,0,10	0/0:16,0:18:27.46:0,27,165	0/0:4,0:11:14.22:0,14,41	0/0:12,0:14:28.50:0,29,179	0/0:8,0:25:30.47:0,30,88	0/0:12,0:12:14.60:0,15,95	0/0:15,0:18:33.55:0,34,204	0/0:16,0:17:34.45:0,34,215	0/1:9,2:12:35.92:36,0,47	1/1:0,5:5:14.95:124,15,0	0/1:8,8:16:14.54:134,0,15	0/1:2,2:4:13.27:20,0,13	0/0:11,0:12:25.61:0,26,160	0/0:15,0:17:12.38:0,12,160	0/0:19,0:19:23.42:0,23,154	0/0:5,0:7:9.93:0,10,50
chr10	75468151	.	C	CA	1805.01	PASS	AB=0.913;AC=17;AF=0.304;AN=56;BaseQRankSum=6.571;DP=449;FS=1.573;HRun=11;HaplotypeScore=51.0465;InbreedingCoeff=0.7006;MQ=59.05;MQ0=15;MQRankSum=3.137;QD=12.53;ReadPosRankSum=1.475;VQSLOD=3.2436;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,16:24:27.85:453,28,0	0/0:6,0:6:14.91:0,15,112	0/0:10,0:6:11.54:0,12,73	0/0:6,0:3:0.69:0,1,19	0/0:23,0:23:50.78:0,51,392	0/1:16,2:18:16:16,0,257	0/0:13,1:13:2.38:0,2,196	0/0:22,0:22:29.73:0,30,227	1/1:7,14:19:18.82:362,19,0	0/0:19,0:17:49.85:0,50,376	0/1:9,1:10:3.54:4,0,159	1/1:3,5:8:9.02:91,9,0	1/1:0,12:12:30.06:304,30,0	0/0:20,0:18:44.46:0,44,331	0/1:12,1:13:0.57:1,0,178	0/0:16,0:15:38.83:0,39,300	0/0:23,0:23:50.78:0,51,393	0/0:29,0:25:53.10:0,53,416	0/0:16,0:17:34.79:0,35,250	0/0:18,0:19:46.83:0,47,351	0/0:15,0:15:16.50:0,16,153	1/1:4,9:12:6.82:249,7,0	1/1:6,7:11:24.04:238,24,0	1/1:1,9:10:27.05:274,27,0	0/0:11,0:11:20.88:0,21,162	0/0:19,1:20:25.38:0,25,368	0/0:18,0:18:43.84:0,44,331	0/0:12,0:11:10.82:0,11,116
chr10	75470381	.	CTTAT	C	290.57	PASS	AC=10;AF=0.200;AN=50;BaseQRankSum=2.600;DP=332;FS=5.129;HRun=0;HaplotypeScore=50.0142;InbreedingCoeff=0.6319;MQ=73.63;MQ0=2;MQRankSum=0.067;QD=7.85;ReadPosRankSum=-0.693;VQSLOD=1.2457;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:27.09:0,27,641	0/0:8,0:8:15.02:0,15,263	./.	./.	0/0:12,0:12:6.02:0,6,143	0/0:14,0:14:33.11:0,33,779	0/0:7,0:7:3.01:0,3,71	0/0:32,0:32:36.12:0,36,780	1/1:8,1:9:3.01:47,3,0	0/0:13,0:13:18.06:0,18,382	0/0:9,0:9:9.03:0,9,214	1/1:3,1:4:3.01:47,3,0	1/1:4,4:8:9.03:142,9,0	0/0:10,0:10:12.04:0,12,285	0/0:11,0:11:6.02:0,6,143	0/0:11,0:11:6.02:0,6,143	0/0:26,0:26:51.15:0,51,1137	0/0:23,0:23:33.11:0,33,757	0/0:12,0:11:12.04:0,12,285	0/0:4,0:4:6.02:0,6,123	0/0:5,0:5:6.02:0,6,143	1/1:8,0:8:6.02:95,6,0	1/1:6,2:8:6.02:95,6,0	./.	0/0:18,0:18:27.09:0,27,642	0/0:11,0:11:6.02:0,6,142	0/0:22,0:22:24.08:0,24,570	0/0:9,0:9:9.03:0,9,214
chr10	75471270	.	GTTAT	G	3904.43	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.655;DP=539;FS=9.640;HRun=0;HaplotypeScore=85.8969;InbreedingCoeff=0.9981;MQ=64.87;MQ0=0;MQRankSum=-0.341;QD=35.49;ReadPosRankSum=3.538;VQSLOD=2.9291;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:63.11:0,63,1490	0/0:11,0:11:33.11:0,33,790	0/0:16,0:15:39.13:0,39,935	0/0:13,0:13:27.09:0,27,620	0/0:22,0:22:63.22:0,63,1599	0/0:9,0:9:24.08:0,24,613	0/0:13,0:13:33.11:0,33,834	0/0:38,0:38:87.26:0,87,1930	1/1:2,13:15:24.08:421,24,0	0/0:24,0:24:63.21:0,63,1528	0/0:22,0:22:57.18:0,57,1400	1/1:4,15:19:45.15:789,45,0	1/1:2,14:16:33.11:578,33,0	0/0:23,0:23:60.21:0,60,1524	0/0:20,0:20:60.19:0,60,1411	0/0:11,0:11:33.11:0,33,813	0/0:19,0:19:48.16:0,48,1216	0/0:8,0:8:24.08:0,24,612	0/0:26,0:26:57.19:0,57,1365	0/0:29,0:29:78.27:0,78,1951	0/0:13,0:13:30.10:0,30,733	1/1:1,14:15:36.04:594,36,0	1/1:2,21:22:51.17:892,51,0	1/1:2,20:22:36.12:631,36,0	0/0:21,0:21:60.21:0,60,1495	0/0:29,0:29:78.27:0,78,1944	0/0:26,0:26:63.20:0,63,1550	0/0:10,0:10:30.10:0,30,766
chr10	75474849	.	A	AAATGAATGAATG	11528.22	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-1.095;DP=566;FS=1.627;HRun=0;HaplotypeScore=177.5298;InbreedingCoeff=0.9529;MQ=64.91;MQ0=2;MQRankSum=-12.711;QD=79.50;ReadPosRankSum=-3.631;VQSLOD=4.3173;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:2.67:0,3,1315	0/0:6,0:6:18.05:0,18,466	0/0:24,0:21:18.06:0,18,550	0/0:16,0:14:21.04:0,21,423	0/0:32,0:32:68.26:0,68,2171	0/0:18,0:18:42.14:0,42,1301	0/0:15,0:15:36.10:0,36,1093	0/0:29,0:29:45.07:0,45,1063	1/1:11,14:27:39.13:2190,39,0	0/0:13,0:13:36.12:0,36,1211	0/0:16,0:16:45.15:0,45,1402	1/1:12,13:26:36.12:1987,36,0	1/1:9,15:25:45.15:2530,45,0	0/0:24,0:24:60.19:0,60,1884	0/0:28,0:28:63.20:0,63,2051	0/0:21,0:21:51.18:0,51,1716	0/0:21,0:21:36.12:0,36,1161	0/0:13,0:13:30.10:0,30,890	0/0:13,0:13:24.04:0,24,564	0/0:19,0:19:51.18:0,51,1615	0/0:15,0:15:36.12:0,36,1218	1/1:5,9:18:27.09:1453,27,0	1/1:12,16:31:47.67:2740,48,0	1/1:12,5:17:12.50:629,13,0	0/0:13,0:13:30.10:0,30,841	0/0:23,0:23:60.20:0,60,1995	0/0:36,0:36:81.28:0,81,2605	0/0:10,0:10:30.05:0,30,700
chr10	75478488	.	CAA	C	1130.17	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=3.405;DP=493;FS=11.125;HRun=15;HaplotypeScore=69.6903;InbreedingCoeff=0.9259;MQ=50.12;MQ0=9;MQRankSum=2.202;QD=11.53;ReadPosRankSum=3.033;VQSLOD=1.6011;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:24.03:0,24,281	0/0:14,0:14:23.99:0,24,285	0/0:14,0:5:10.25:0,10,92	0/0:3,0:1:2.37:0,2,8	0/0:23,0:23:47.53:0,48,539	0/0:17,0:19:39.26:0,39,421	0/0:13,0:13:32.99:0,33,385	0/0:22,0:25:54.86:0,55,525	1/1:4,8:14:29.31:235,29,0	0/0:22,0:22:44.98:0,45,518	0/0:19,0:21:29.81:0,30,491	1/1:12,4:15:26.37:199,26,0	1/1:4,10:15:35.60:291,36,0	0/0:15,0:15:33.01:0,33,390	0/0:19,0:21:46.40:0,46,459	0/0:16,0:20:47.52:0,48,544	0/0:28,0:26:51.91:0,52,617	0/0:25,0:25:59.14:0,59,713	0/0:14,0:17:34.89:0,35,336	0/0:27,0:27:53.97:0,54,614	0/0:7,0:6:14.36:0,14,150	1/1:10,6:19:8.09:142,8,0	1/1:6,11:17:12.90:220,13,0	1/1:4,11:14:26.71:223,27,0	0/0:16,0:17:41.60:0,42,500	0/0:13,0:16:25.47:0,25,230	0/0:20,0:20:30.47:0,30,354	0/0:5,0:7:12.03:0,12,151
chr10	75479473	.	G	GT	1969.10	PASS	AB=0.568;AC=9;AF=0.161;AN=56;BaseQRankSum=-7.220;DP=637;FS=0.000;HRun=10;HaplotypeScore=72.1972;InbreedingCoeff=0.6405;MQ=68.18;MQ0=9;MQRankSum=2.211;QD=18.07;ReadPosRankSum=2.204;VQSLOD=4.2261;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:64.72:0,65,522	0/0:15,0:16:43.99:0,44,350	0/0:49,0:23:12.49:0,12,136	0/0:39,0:19:13.78:0,14,106	0/0:23,0:23:60.36:0,60,485	0/0:17,0:18:46.99:0,47,375	0/0:16,0:17:40.98:0,41,326	0/0:28,0:27:50.86:0,51,413	1/1:1,13:14:11.45:327,11,0	0/0:29,1:31:24.01:0,24,468	0/0:17,0:17:41.94:0,42,345	0/1:4,12:16:39.52:225,0,40	0/1:5,14:20:4.26:351,0,4	0/0:18,0:18:47.87:0,48,381	0/0:11,0:11:26.96:0,27,219	0/0:18,1:20:23.84:0,24,379	0/0:23,0:22:46.75:0,47,429	0/0:18,0:18:41.95:0,42,345	0/0:21,0:21:47.92:0,48,393	0/0:41,0:41:99:0,108,884	0/0:18,0:18:41.91:0,42,344	1/1:5,18:23:48.08:499,48,0	1/1:2,15:18:35.20:410,35,0	0/1:4,14:18:10.19:312,0,10	0/0:20,0:21:46.97:0,47,375	0/0:29,0:29:65.87:0,66,536	0/0:27,0:27:71.89:0,72,587	0/0:16,0:16:38.90:0,39,320
chr10	75479651	.	CAA	C	649.55	PASS	AB=0.741;AC=12;AF=0.214;AN=56;BaseQRankSum=7.106;DP=538;FS=4.278;HRun=16;HaplotypeScore=77.6310;InbreedingCoeff=0.5914;MQ=67.46;MQ0=5;MQRankSum=0.972;QD=5.28;ReadPosRankSum=6.015;VQSLOD=-0.3332;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,1:31:47.74:215,48,0	0/0:5,0:6:14.41:0,14,165	0/0:28,1:11:5.03:0,5,38	0/0:28,0:13:3.48:0,3,82	0/0:28,0:31:61.74:0,62,622	0/0:25,0:31:61.16:0,61,620	0/0:10,0:10:24.06:0,24,297	0/0:34,0:38:58.26:0,58,556	0/1:5,4:10:6.07:72,0,6	0/0:20,0:21:41.66:0,42,452	0/0:18,0:18:24.46:0,24,250	0/1:6,3:10:4.98:52,0,5	1/1:4,13:19:23.33:174,23,0	0/0:12,0:15:35.39:0,35,382	0/0:17,0:21:53.25:0,53,601	0/0:14,0:18:38.43:0,38,410	0/0:17,0:21:47.03:0,47,576	0/0:14,1:17:10.94:0,11,343	0/0:23,0:23:32.99:0,33,345	0/0:19,0:21:36.01:0,36,397	0/0:18,0:21:37.16:0,37,370	1/1:5,6:12:17.63:137,18,0	0/1:5,2:12:0.79:57,0,1	1/1:6,1:9:14.41:99,14,0	0/0:14,1:18:9.73:0,10,331	0/0:19,1:21:4.96:0,5,298	0/1:18,1:20:11.71:12,0,290	0/0:6,0:6:0:0,0,0
chr10	75488292	.	TA	T	169.08	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=3.331;DP=305;FS=2.815;HRun=14;HaplotypeScore=34.9059;InbreedingCoeff=0.6865;MQ=54.69;MQ0=25;MQRankSum=3.699;QD=4.12;ReadPosRankSum=0.332;VQSLOD=-0.2904;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:11:20.98:0,21,186	0/0:3,0:3:9.01:0,9,84	1/1:11,0:3:1.66:5,2,0	0/0:9,0:4:5.99:0,6,48	0/0:16,0:16:29.87:0,30,280	0/0:12,1:15:5.23:0,5,188	0/1:6,0:7:4.59:5,0,83	0/0:28,2:27:11.22:0,11,498	1/1:0,3:3:8.93:62,9,0	0/0:13,0:11:24.03:0,24,223	0/0:15,1:14:23.15:0,23,238	1/1:1,4:4:5.94:41,6,0	1/1:0,7:8:16.92:109,17,0	0/0:5,0:6:9.01:0,9,84	0/0:8,1:9:18.02:0,18,167	0/0:5,0:6:11.16:0,11,127	0/0:22,2:22:30.28:0,30,390	0/0:16,1:14:35.54:0,36,296	0/0:15,0:12:23.86:0,24,209	0/0:9,0:8:15.02:0,15,139	0/0:3,0:2:3:0,3,28	1/1:0,4:4:8.93:62,9,0	1/1:0,3:3:5.95:41,6,0	./.	0/0:11,0:9:12.01:0,12,112	0/0:20,0:19:41.79:0,42,353	0/0:13,0:13:33.02:0,33,301	0/0:8,0:6:11.90:0,12,93
chr10	75492592	.	TCTCACA	T	89.15	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.151;DP=455;FS=0.000;HRun=0;HaplotypeScore=88.9811;InbreedingCoeff=0.5295;MQ=51.42;MQ0=30;MQRankSum=-2.130;QD=3.71;ReadPosRankSum=-1.420;VQSLOD=1.2517;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,18:22:8.93:172,9,0	0/0:5,0:5:15.05:0,15,507	0/0:29,0:10:20.18:0,20,320	0/0:32,0:10:21.52:0,22,314	0/0:18,0:18:39.09:0,39,1226	0/0:26,0:25:60.15:0,60,1657	0/0:18,0:18:39.02:0,39,902	0/0:21,0:20:60.14:0,60,1228	0/0:13,0:30:5.89:0,6,106	0/0:8,0:7:21.03:0,21,526	0/0:8,0:8:18.03:0,18,377	0/0:16,0:16:21.52:0,22,356	0/0:20,0:20:39.13:0,39,700	0/0:12,0:12:36.12:0,36,1120	0/0:16,0:16:27:0,27,769	0/0:16,0:15:45.14:0,45,1336	0/0:13,0:13:33.11:0,33,1022	0/0:10,0:8:24.01:0,24,574	0/0:16,0:9:26.93:0,27,387	0/0:9,0:9:24.08:0,24,780	0/0:18,0:16:45.11:0,45,1234	0/0:8,0:7:3.01:0,3,50	0/0:11,0:11:3:0,3,25	0/0:13,0:9:3.01:0,3,52	0/0:13,0:13:33.10:0,33,893	0/0:14,0:13:39.11:0,39,974	0/0:23,0:22:45.05:0,45,1450	0/0:7,0:7:20.99:0,21,463
chr10	75492594	.	T	TCTCTCTCACA	1190.58	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.057;DP=464;FS=0.000;HRun=0;HaplotypeScore=121.7472;InbreedingCoeff=0.8202;MQ=51.57;MQ0=29;MQRankSum=-3.689;QD=12.80;ReadPosRankSum=-1.200;VQSLOD=2.3599;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:10.10:0,10,106	0/0:6,0:6:18.05:0,18,448	0/0:31,0:10:15.68:0,16,369	0/0:31,0:11:11.49:0,11,290	0/0:18,0:18:21.21:0,21,984	0/0:27,0:27:63.19:0,63,1443	0/0:18,0:18:45.15:0,45,934	0/0:22,0:21:60.18:0,60,1054	1/1:31,0:30:8.05:152,8,0	0/0:9,0:8:20.92:0,21,450	0/0:9,0:9:18.06:0,18,373	1/1:16,0:16:24.47:301,24,0	1/1:20,0:20:33.05:811,33,0	0/0:13,0:13:36.12:0,36,962	0/0:16,0:16:27.09:0,27,664	0/0:15,0:15:45.15:0,45,1095	0/0:13,0:13:33.11:0,33,864	0/0:11,0:9:24.08:0,24,606	0/0:14,0:8:19.93:0,20,302	0/0:10,0:10:24.07:0,24,603	0/0:19,0:17:45.14:0,45,1058	0/0:8,0:7:0:0,0,0	1/1:2,7:12:0.46:1,0,0	1/1:6,6:11:3.01:69,3,0	0/0:10,0:13:33.11:0,33,858	0/0:12,0:13:36.11:0,36,900	0/0:22,0:21:44.12:0,44,1399	0/0:7,0:7:12.04:0,12,347
chr10	75494532	.	CCAACAACAACAA	C	1968.55	PASS	AB=0.698;AC=13;AF=0.232;AN=56;BaseQRankSum=6.734;DP=552;FS=2.765;HRun=0;HaplotypeScore=188.0590;InbreedingCoeff=0.7495;MQ=77.66;MQ0=3;MQRankSum=-7.580;QD=16.97;ReadPosRankSum=2.475;VQSLOD=2.5233;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:37:79.72:80,0,91	0/0:13,0:13:21.07:0,21,1176	0/0:25,0:22:6.01:0,6,67	0/0:36,0:29:3:0,3,28	0/0:14,0:14:33.11:0,33,1816	0/0:29,0:29:69.20:0,69,3649	0/0:20,0:19:33.10:0,33,1545	0/0:28,0:27:27.56:0,28,1190	1/1:4,5:9:8.57:310,9,0	0/0:10,0:22:57.19:0,57,2818	0/0:4,0:10:24.08:0,24,1028	1/1:8,7:15:12.04:413,12,0	1/1:9,8:17:21.07:723,21,0	0/0:20,0:22:33.11:0,33,1696	0/0:30,0:30:57.20:0,57,3048	0/0:20,0:20:42.14:0,42,2299	0/0:26,0:26:49.01:0,49,2651	0/0:9,0:9:18.03:0,18,898	0/0:10,0:11:12.51:0,13,623	0/0:18,0:19:42.14:0,42,2372	0/0:35,0:35:55.06:0,55,2800	1/1:5,7:12:6.02:199,6,0	1/1:2,7:9:6.02:207,6,0	1/1:10,6:17:5.70:206,6,0	0/0:16,0:18:27.09:0,27,1195	0/0:15,0:18:22.01:0,22,956	0/0:24,0:24:36.11:0,36,1683	0/0:6,0:6:12.04:0,12,634
chr10	75496402	.	G	GAAA	1614.91	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=9.444;DP=572;FS=8.632;HRun=12;HaplotypeScore=90.8715;InbreedingCoeff=0.8425;MQ=58.35;MQ0=5;MQRankSum=-4.625;QD=14.29;ReadPosRankSum=-3.556;VQSLOD=0.8234;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:36:51.82:0,52,316	0/0:5,0:6:3.45:0,3,61	0/0:9,0:6:10.97:0,11,120	0/1:7,0:7:12.37:21,0,12	0/0:21,0:22:36.25:0,36,407	0/0:19,0:19:51.06:0,51,541	0/0:21,0:24:53.94:0,54,598	0/0:31,0:29:63.98:0,64,669	1/1:3,13:17:12.01:186,12,0	0/0:23,0:22:55.82:0,56,567	0/0:14,0:16:12.39:0,12,164	1/1:3,13:19:13.24:159,13,0	1/1:13,3:16:33.04:320,33,0	0/0:23,0:26:12.10:0,12,439	0/0:23,0:23:63.15:0,63,694	0/0:15,0:16:33.75:0,34,331	0/0:35,0:35:66.83:0,67,763	0/0:27,0:29:70.08:0,70,684	0/0:24,0:27:34.24:0,34,477	0/0:21,0:21:39.39:0,39,419	0/0:12,0:14:29.96:0,30,340	1/1:10,7:18:41.97:537,42,0	1/1:20,3:24:29.48:357,29,0	1/1:9,2:12:20.93:221,21,0	0/0:16,0:18:41.08:0,41,406	0/0:32,0:33:76.60:0,77,771	0/0:21,0:23:56.58:0,57,570	0/0:7,0:7:11.97:0,12,135
chr10	75499947	.	CTTCCTT	C	3555.07	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=10.950;DP=728;FS=0.513;HRun=0;HaplotypeScore=153.6732;InbreedingCoeff=0.8725;MQ=65.78;MQ0=1;MQRankSum=-10.138;QD=18.52;ReadPosRankSum=0.349;VQSLOD=3.2819;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,22:33:4.25:423,4,0	0/0:10,0:10:24.07:0,24,618	0/0:37,0:20:20.89:0,21,468	0/0:49,0:32:21.04:0,21,438	0/0:23,0:23:51.18:0,51,1577	0/0:37,0:36:87.26:0,87,2552	0/0:30,0:30:72.23:0,72,2101	0/0:34,0:34:64.45:0,64,1536	1/1:11,12:23:21.07:443,21,0	0/0:36,0:36:60.20:0,60,1643	0/0:26,0:26:39.13:0,39,1253	1/1:7,15:22:33.11:695,33,0	1/1:9,21:31:33.11:668,33,0	0/0:21,0:21:45.14:0,45,1225	0/0:28,0:27:54.19:0,54,1708	0/0:22,0:22:45.15:0,45,1486	0/0:19,0:19:45.15:0,45,1355	0/0:10,0:10:18.06:0,18,472	0/1:15,0:15:33.32:33,0,403	0/0:19,0:19:33.11:0,33,1045	0/0:36,0:36:96.32:0,96,2885	1/1:9,11:20:18.73:380,19,0	1/1:8,21:29:35.03:713,35,0	1/1:12,7:19:12.92:200,13,0	0/0:28,0:28:63.21:0,63,1825	0/0:36,0:36:75.26:0,75,2292	0/0:26,0:26:54.17:0,54,1559	0/0:9,0:9:27.05:0,27,596
chr10	75500031	.	TC	T	1576.21	PASS	AB=0.780;AC=6;AF=0.107;AN=56;BaseQRankSum=12.110;DP=834;FS=0.000;HRun=3;HaplotypeScore=119.5746;InbreedingCoeff=-0.1228;MQ=61.44;MQ0=8;MQRankSum=-7.059;QD=8.00;ReadPosRankSum=-1.056;VQSLOD=0.3548;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:63.21:0,63,897	0/0:17,0:17:51.17:0,51,733	0/0:59,0:24:8.61:0,9,435	0/0:69,0:35:39.57:0,40,700	0/0:38,0:38:99:0,114,1603	0/0:27,0:26:81.26:0,81,1146	0/0:31,0:31:93.27:0,93,1282	0/0:24,0:23:54.35:0,54,879	0/1:20,8:28:99:221,0,649	0/0:27,0:27:78.26:0,78,1104	0/0:33,0:33:99:0,99,1406	0/1:22,13:35:99:425,0,599	0/1:27,9:36:99:228,0,900	0/0:28,0:28:81.25:0,81,1129	0/0:33,0:33:90.29:0,90,1277	0/0:23,0:23:66.18:0,66,879	0/0:33,0:33:99:0,99,1389	0/0:12,0:12:35.77:0,36,465	0/0:15,0:15:36.11:0,36,500	0/0:29,0:29:84.27:0,84,1187	0/0:31,0:31:90.17:0,90,1262	0/1:24,13:37:99:458,0,672	0/1:22,9:31:99:265,0,680	0/1:25,5:30:99:104,0,838	0/0:23,0:23:69.22:0,69,977	0/0:20,0:20:51.16:0,51,717	0/0:27,0:27:81.23:0,81,1109	0/0:9,0:9:24.08:0,24,345
chr10	75503854	.	TTGAATGTGACAC	T	5780.51	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.335;DP=580;FS=10.940;HRun=0;HaplotypeScore=195.7165;InbreedingCoeff=0.9824;MQ=87.29;MQ0=0;MQRankSum=-11.866;QD=57.81;ReadPosRankSum=1.846;VQSLOD=3.7326;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.28:0,81,4904	0/0:8,0:8:24.08:0,24,1239	0/0:21,0:21:60.21:0,60,3004	0/0:24,0:24:66.23:0,66,3214	0/0:21,0:21:60.21:0,60,3435	0/0:17,0:17:51.15:0,51,2675	0/0:14,0:14:42.14:0,42,2489	0/0:28,0:28:78.27:0,78,4396	1/1:2,9:11:24.08:901,24,0	0/0:23,0:23:51.18:0,51,2890	0/0:11,0:11:33.11:0,33,1889	1/1:1,17:18:42.14:1576,42,0	1/1:4,17:21:39.13:1437,39,0	0/0:21,0:21:57.20:0,57,3408	0/0:30,0:29:81.28:0,81,4419	0/0:14,0:14:39.13:0,39,2186	0/0:35,0:35:99:0,99,5937	0/0:21,0:21:60.21:0,60,3214	0/0:22,0:22:63.20:0,63,3206	0/0:19,0:19:57.20:0,57,3487	0/0:61,0:61:99:0,175,10158	1/1:1,13:14:18.06:556,18,0	1/1:3,12:15:18.45:648,18,0	1/1:4,17:21:17.68:663,18,0	0/0:17,0:17:51.18:0,51,2994	0/0:12,0:12:36.11:0,36,2037	0/0:30,0:30:84.29:0,84,4615	0/0:4,0:4:9.03:0,9,554
chr10	75504790	.	TACTCCAG	T	8220.41	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.275;DP=726;FS=1.670;HRun=0;HaplotypeScore=167.9668;InbreedingCoeff=0.9967;MQ=91.21;MQ0=0;MQRankSum=-16.563;QD=50.74;ReadPosRankSum=3.279;VQSLOD=5.0200;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,4083	0/0:14,0:14:39.13:0,39,1557	0/0:25,0:25:75.26:0,75,2792	0/0:38,0:38:99:0,114,3957	0/0:30,0:30:90.31:0,90,3435	0/0:23,0:23:69.24:0,69,2624	0/0:21,0:21:60.21:0,60,2252	0/0:39,0:39:99:0,108,3892	1/1:2,24:25:51.11:1259,51,0	0/0:25,0:25:72.25:0,72,2878	0/0:26,0:26:78.22:0,78,2684	1/1:1,32:33:69.17:1662,69,0	1/1:1,24:25:57.20:1436,57,0	0/0:23,0:23:66.20:0,66,2171	0/0:28,0:28:84.29:0,84,3110	0/0:24,1:25:34.36:0,34,2798	0/0:15,0:15:45.14:0,45,1703	0/0:18,0:18:54.19:0,54,1967	0/0:31,0:31:81.27:0,81,2732	0/0:22,0:22:66.23:0,66,2588	0/0:33,0:33:93.30:0,93,3360	1/1:0,28:28:80.95:1853,81,0	1/1:4,19:23:39.13:928,39,0	1/1:4,23:27:45.15:1082,45,0	0/0:19,0:19:54.19:0,54,2069	0/0:29,0:29:84.29:0,84,3209	0/0:38,0:38:99:0,108,3889	0/0:5,0:5:15.05:0,15,392
chr10	75510203	.	AATGTTCGGGAAGGTGGTG	A	13206.18	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.704;DP=716;FS=3.797;HRun=0;HaplotypeScore=342.1126;InbreedingCoeff=0.9894;MQ=97.68;MQ0=0;MQRankSum=-14.876;QD=123.42;ReadPosRankSum=4.702;VQSLOD=4.0294;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,9586	0/0:17,0:17:51.18:0,51,3994	0/0:40,0:40:99:0,120,7021	0/0:35,0:35:99:0,105,6230	0/0:25,0:25:75.26:0,75,5855	0/0:29,0:29:84.29:0,84,6603	0/0:24,0:24:72.25:0,72,6202	0/0:32,0:32:96.33:0,96,7178	1/1:0,19:19:51.18:2640,51,0	0/0:23,0:23:69.24:0,69,5815	0/0:27,0:27:81.27:0,81,6480	1/1:0,14:14:36.12:1837,36,0	1/1:1,21:22:51.18:2700,51,0	0/0:38,0:38:99:0,114,9798	0/0:28,0:28:84.29:0,84,7150	0/0:29,0:29:87.30:0,87,7437	0/0:32,0:32:93.31:0,93,7116	0/0:30,0:30:90.31:0,90,7305	0/0:25,0:25:72.24:0,72,4861	0/0:22,0:22:66.23:0,66,5269	0/0:35,0:35:99:0,99,8072	1/1:0,22:22:60.21:3183,60,0	1/1:0,19:19:48.16:2363,48,0	1/1:0,11:11:9.97:483,10,0	0/0:16,0:16:48.16:0,48,4010	0/0:33,0:33:99:0,99,7913	0/0:21,0:21:63.22:0,63,5294	0/0:7,0:7:21.07:0,21,1881
chr10	75510760	.	GTTT	G	1495.05	PASS	AB=0.650;AC=10;AF=0.179;AN=56;BaseQRankSum=10.548;DP=650;FS=0.000;HRun=17;HaplotypeScore=110.8962;InbreedingCoeff=0.7920;MQ=69.78;MQ0=0;MQRankSum=-0.560;QD=10.91;ReadPosRankSum=7.464;VQSLOD=0.2089;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,1:24:52.08:0,52,520	0/0:13,0:16:39.10:0,39,558	0/0:22,0:14:23.61:0,24,295	0/0:16,1:15:15.65:0,16,331	0/0:25,0:29:59.49:0,59,773	0/0:20,0:25:65.45:0,65,832	0/0:18,0:21:55.32:0,55,707	0/0:34,0:39:79.62:0,80,965	1/1:9,16:29:46.62:481,47,0	0/0:19,0:25:54.05:0,54,673	0/0:22,0:22:42.12:0,42,601	1/1:9,17:28:40.77:442,41,0	0/1:14,9:26:19.53:216,0,20	0/0:23,0:23:47.93:0,48,593	0/0:16,0:22:45.55:0,46,608	0/0:20,0:24:69.09:0,69,892	0/0:22,0:32:76.11:0,76,1036	0/0:16,0:16:39.08:0,39,533	0/0:18,0:20:40.33:0,40,568	0/0:29,0:37:78.58:0,79,1144	0/0:8,0:10:15.03:0,15,232	0/1:6,8:16:1.46:177,0,1	1/1:7,6:16:9.10:132,9,0	1/1:7,14:22:19.26:213,19,0	0/0:20,0:26:70.31:0,70,911	0/0:22,0:22:49.67:0,50,709	0/0:24,0:29:60.03:0,60,749	0/0:11,0:11:27.04:0,27,371
chr10	75514664	.	TCACCAGATA	T	2273.46	PASS	AB=0.516;AC=1;AF=0.018;AN=56;BaseQRankSum=8.497;DP=730;FS=2.518;HRun=0;HaplotypeScore=191.4290;InbreedingCoeff=-0.0182;MQ=80.80;MQ0=0;MQRankSum=-8.744;QD=68.89;ReadPosRankSum=1.123;VQSLOD=3.7564;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.30:0,87,4099	0/0:10,0:10:30.10:0,30,1432	0/0:21,0:21:63.20:0,63,2621	0/0:18,0:18:54.19:0,54,2394	0/0:34,0:34:96.33:0,96,4612	0/0:25,0:25:66.21:0,66,2854	0/0:15,0:15:45.15:0,45,2136	0/0:40,0:40:99:0,102,4342	0/0:19,0:19:51.18:0,51,2452	0/0:39,0:39:99:0,114,5147	0/0:30,0:30:87.30:0,87,4155	0/0:25,0:25:72.25:0,72,3309	0/1:2,31:33:59.94:2348,0,60	0/0:19,0:19:57.20:0,57,2728	0/0:32,0:31:84.29:0,84,3969	0/0:27,0:27:69.24:0,69,3131	0/0:20,0:20:57.20:0,57,2724	0/0:10,0:10:30.10:0,30,1338	0/0:23,0:23:66.22:0,66,2869	0/0:35,0:35:99:0,105,5034	0/0:18,0:18:54.19:0,54,2508	0/0:23,0:23:69.24:0,69,3290	0/0:29,0:29:87.30:0,87,3984	0/0:15,0:15:45.15:0,45,2163	0/0:40,0:40:99:0,111,5321	0/0:33,0:33:90.31:0,90,4231	0/0:29,0:29:87.30:0,87,4081	0/0:38,0:38:99:0,111,5136
chr10	75516168	.	AT	A	2895.79	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=13.018;DP=612;FS=15.594;HRun=10;HaplotypeScore=61.1435;InbreedingCoeff=0.8860;MQ=73.28;MQ0=0;MQRankSum=0.308;QD=19.97;ReadPosRankSum=1.835;VQSLOD=3.1773;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:28:70.01:585,70,0	0/0:8,0:8:24.05:0,24,255	0/0:17,0:17:31.25:0,31,302	0/1:8,0:8:10.44:10,0,118	0/0:27,1:28:40.09:0,40,651	0/0:24,0:24:60.16:0,60,664	0/0:10,0:10:27.07:0,27,299	0/0:29,1:31:54.99:0,55,811	1/1:0,20:20:59.99:521,60,0	0/0:27,0:28:75.04:0,75,811	0/0:16,0:16:45.10:0,45,481	1/1:1,24:25:68.98:599,69,0	1/1:3,20:23:29.80:488,30,0	0/0:19,0:19:42.11:0,42,465	0/0:24,0:24:66.18:0,66,730	0/0:18,0:18:51.14:0,51,564	0/0:28,3:31:3.05:0,3,718	0/0:21,1:23:33.94:0,34,586	0/0:26,1:27:26.61:0,27,715	0/0:26,1:28:51.99:0,52,784	0/0:17,0:17:39.11:0,39,431	1/1:2,8:11:23.03:188,23,0	1/1:1,10:11:29.99:260,30,0	1/1:1,18:19:50.99:443,51,0	0/0:32,2:35:40.96:0,41,878	0/0:26,1:27:49.16:0,49,757	0/0:32,0:32:81.21:0,81,891	0/0:23,1:24:43.11:0,43,688
chr10	75518784	.	AG	A	892.95	PASS	AB=0.702;AC=8;AF=0.154;AN=52;BaseQRankSum=7.602;DP=497;FS=39.968;HRun=1;HaplotypeScore=82.8103;InbreedingCoeff=0.4075;MQ=40.71;MQ0=57;MQRankSum=-5.101;QD=10.76;ReadPosRankSum=-0.425;VQSLOD=-0.4527;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:14:14.95:0,15,173	0/0:12,0:11:24:0,24,319	./.	./.	0/0:15,0:14:14.25:0,14,199	0/0:20,0:20:41.72:0,42,537	0/0:29,0:24:22.65:0,23,311	0/0:20,0:17:44.96:0,45,551	0/1:4,4:7:52.26:52,0,53	0/0:25,0:23:69.22:0,69,935	0/0:21,0:19:9.51:0,10,111	0/1:8,8:13:8.80:181,0,9	0/1:5,6:10:47.01:215,0,47	0/0:18,0:17:19.95:0,20,250	0/0:24,0:24:40.72:0,41,474	0/0:26,0:24:57.59:0,58,788	0/0:28,0:23:59.93:0,60,782	0/0:22,0:18:35.74:0,36,407	0/0:8,0:7:21.06:0,21,255	0/0:18,0:16:24.64:0,25,302	0/0:23,0:19:26.60:0,27,343	1/1:13,3:13:17.95:216,18,0	1/1:8,5:12:18.06:231,18,0	0/1:15,4:13:47.24:141,0,47	0/0:27,0:26:40.19:0,40,483	0/0:23,0:20:55.91:0,56,669	0/0:23,0:19:44.44:0,44,565	0/0:8,0:6:17.21:0,17,181
chr10	75518790	.	AGAGAG	A	1073.11	PASS	AB=0.792;AC=10;AF=0.192;AN=52;BaseQRankSum=7.828;DP=494;FS=26.810;HRun=0;HaplotypeScore=106.5068;InbreedingCoeff=0.5069;MQ=40.28;MQ0=57;MQRankSum=-7.433;QD=10.73;ReadPosRankSum=1.529;VQSLOD=0.9930;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:12:54.97:88,0,55	0/0:12,0:11:24.02:0,24,350	./.	./.	0/0:15,0:14:13.80:0,14,268	0/0:18,0:18:34.96:0,35,522	0/0:28,0:24:15.81:0,16,280	0/0:26,0:23:51.01:0,51,360	0/1:4,4:7:0.62:262,0,1	0/0:27,0:25:67.72:0,68,990	0/0:21,0:19:9.22:0,9,124	1/1:8,5:12:25.57:315,26,0	0/1:5,3:8:24.35:235,0,24	0/0:17,0:16:18.13:0,18,382	0/0:25,0:25:53.18:0,53,838	0/0:25,0:24:62.94:0,63,998	0/0:29,0:24:63.38:0,63,1018	0/0:22,0:18:28.38:0,28,354	0/0:8,0:7:15.87:0,16,201	0/0:17,0:16:23.04:0,23,298	0/0:25,0:20:17.69:0,18,442	1/1:12,0:10:6.02:100,6,0	1/1:9,3:12:8.75:164,9,0	0/1:13,3:12:36.72:58,0,37	0/0:26,0:25:40.59:0,41,612	0/0:21,0:19:53.10:0,53,706	0/0:22,0:18:41.61:0,42,810	0/0:9,0:7:20.01:0,20,206
chr10	75518797	.	GAGA	G	747.78	PASS	AB=0.957;AC=17;AF=0.327;AN=52;BaseQRankSum=3.999;DP=481;FS=5.441;HRun=0;HaplotypeScore=98.3719;InbreedingCoeff=0.3488;MQ=40.83;MQ0=58;MQRankSum=-0.382;QD=4.13;ReadPosRankSum=0.668;VQSLOD=1.3321;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:12:13.54:63,0,14	0/0:9,0:9:2.59:0,3,110	./.	./.	1/1:15,0:13:4.98:75,5,0	0/0:16,0:16:21.34:0,21,271	0/0:30,0:26:30.17:0,30,285	0/0:26,0:21:0.94:0,1,2	1/1:10,0:9:2.01:18,2,0	1/1:27,0:25:35.23:318,35,0	1/1:18,0:16:0.38:66,0,0	0/1:14,0:11:8.19:37,0,8	0/1:8,0:7:21.72:37,0,22	0/1:13,5:16:29.45:29,0,42	0/0:27,0:27:11.25:0,11,470	0/0:25,0:23:46.40:0,46,534	0/0:27,0:22:41.92:0,42,473	0/0:21,0:17:32.47:0,32,411	0/0:7,0:5:8.86:0,9,94	0/0:15,0:14:22.90:0,23,227	0/0:24,0:20:18.51:0,19,225	0/0:13,0:10:2.90:0,3,16	0/0:14,0:13:6.01:0,6,26	1/1:18,0:13:1.08:3,1,0	0/0:23,0:22:33.46:0,33,377	1/1:19,0:17:25.67:218,26,0	0/0:23,0:19:35.55:0,36,367	0/1:8,0:7:7.16:40,0,7
chr10	75518804	.	GA	G	232.59	PASS	AB=0.852;AC=5;AF=0.100;AN=50;BaseQRankSum=4.510;DP=461;FS=2.885;HRun=2;HaplotypeScore=87.1021;InbreedingCoeff=-0.1278;MQ=41.37;MQ0=58;MQRankSum=-1.841;QD=3.19;ReadPosRankSum=-0.106;VQSLOD=0.1141;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:13:29.54:0,30,307	0/0:8,0:8:10.99:0,11,260	./.	./.	0/0:13,0:11:10.18:0,10,70	0/0:14,0:14:33.98:0,34,459	0/0:29,0:26:51.06:0,51,625	0/0:33,0:25:67.93:0,68,873	0/0:7,2:8:17.88:0,18,162	0/1:24,1:23:26.32:26,0,383	0/0:17,0:15:15.83:0,16,85	0/1:11,2:11:21.29:21,0,94	0/1:7,1:6:22.65:23,0,63	0/0:15,0:13:10.91:0,11,166	0/0:25,0:25:59.85:0,60,782	0/0:25,0:23:64.09:0,64,923	0/0:23,0:19:54.14:0,54,781	0/0:20,0:16:33.58:0,34,495	0/0:7,0:4:12.04:0,12,174	0/0:16,0:15:37.58:0,38,493	0/0:20,0:16:33.88:0,34,406	./.	0/0:14,0:13:5.81:0,6,33	0/0:15,3:13:7.92:0,8,125	0/0:21,0:20:43.99:0,44,549	0/1:8,10:16:99:232,0,135	0/0:22,0:18:45.07:0,45,652	0/1:8,1:8:44.09:44,0,202
chr10	75518808	.	A	AAG	183.04	PASS	AB=0.823;AC=3;AF=0.060;AN=50;BaseQRankSum=5.364;DP=467;FS=0.000;HRun=0;HaplotypeScore=94.0765;InbreedingCoeff=0.1630;MQ=42.28;MQ0=59;MQRankSum=-4.248;QD=5.38;ReadPosRankSum=-0.755;VQSLOD=2.5626;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:13:32.80:0,33,467	0/0:7,0:7:18.95:0,19,295	./.	./.	0/0:13,0:11:19.51:0,20,198	0/0:13,0:13:33.98:0,34,509	0/0:28,0:26:21.11:0,21,759	0/0:35,0:25:71.90:0,72,1078	0/1:5,4:8:73.93:155,0,74	0/0:21,0:19:54.17:0,54,748	0/0:18,0:16:21.43:0,21,200	0/1:10,4:12:11.94:116,0,12	0/0:6,0:4:11.36:0,11,111	0/0:15,0:13:16.59:0,17,220	0/0:25,0:25:61.81:0,62,875	0/0:25,0:23:64.77:0,65,1016	0/0:23,0:19:54.18:0,54,877	0/0:20,0:16:5.67:0,6,503	0/0:9,0:6:18:0,18,221	0/0:16,0:15:41.93:0,42,621	0/0:21,0:19:40:0,40,593	./.	0/1:11,0:10:0:0,0,0	0/0:17,1:13:8.03:0,8,120	0/0:20,0:19:48.79:0,49,690	0/0:21,0:19:51.15:0,51,670	0/0:23,0:19:45.14:0,45,712	0/0:14,0:12:26.68:0,27,369
chr10	75518818	.	A	AAG	87.36	PASS	AB=0.929;AC=8;AF=0.148;AN=54;BaseQRankSum=4.441;DP=511;FS=5.465;HRun=0;HaplotypeScore=84.2753;InbreedingCoeff=0.5278;MQ=44.76;MQ0=61;MQRankSum=-3.993;QD=1.82;ReadPosRankSum=-2.592;VQSLOD=0.9468;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:13:36.64:0,37,493	0/0:9,0:9:25.62:0,26,361	1/1:10,0:2:0.89:2,1,0	0/0:22,0:3:2.03:0,2,23	0/0:12,0:10:20.66:0,21,269	0/0:16,0:16:44.36:0,44,685	0/0:29,0:27:48.32:0,48,1017	0/0:34,0:23:66.22:0,66,1059	1/1:5,1:5:3.01:57,3,0	0/0:28,0:26:78.25:0,78,1161	0/0:20,0:18:32.48:0,32,415	0/1:10,2:10:4.19:16,0,4	1/1:5,3:6:0.78:114,1,0	0/0:15,0:13:21.07:0,21,337	0/0:26,0:26:67.65:0,68,1022	0/0:27,0:25:66.20:0,66,1029	0/0:22,0:19:51.17:0,51,821	0/0:23,0:19:2.65:0,3,459	0/0:13,0:6:15.05:0,15,245	0/0:15,0:15:43.39:0,43,684	0/0:22,0:20:46.97:0,47,727	./.	0/1:11,0:10:0:0,0,0	0/0:14,2:11:9.67:0,10,120	0/0:22,0:21:60.57:0,61,865	0/0:22,0:20:60.20:0,60,930	0/0:20,0:16:39.12:0,39,636	0/0:14,0:12:36.12:0,36,562
chr10	75518819	.	GA	G	108.35	PASS	AB=0.750;AC=5;AF=0.093;AN=54;BaseQRankSum=5.976;DP=521;FS=3.821;HRun=2;HaplotypeScore=77.2834;InbreedingCoeff=0.6475;MQ=46.08;MQ0=60;MQRankSum=-4.769;QD=4.17;ReadPosRankSum=-3.246;VQSLOD=-0.6323;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:16:44.65:0,45,480	0/0:9,0:9:24.97:0,25,357	0/0:13,0:2:4.26:0,4,43	0/0:28,1:4:2.17:0,2,19	0/0:12,0:10:20.74:0,21,205	0/0:16,0:16:45.15:0,45,656	0/0:29,0:27:70.22:0,70,997	0/0:36,0:25:72.19:0,72,991	0/1:4,2:5:4.33:12,0,4	0/0:29,0:27:80.39:0,80,987	0/0:19,0:17:37.91:0,38,449	1/1:10,2:10:10.75:104,11,0	1/1:7,1:6:10:107,10,0	0/0:15,0:13:21.07:0,21,314	0/0:25,0:25:70.61:0,71,981	0/0:27,0:25:69.19:0,69,978	0/0:22,0:19:51.17:0,51,752	0/0:22,0:19:42.57:0,43,584	0/0:12,0:5:15.05:0,15,225	0/0:15,0:15:43.70:0,44,631	0/0:23,0:21:53.37:0,53,729	./.	0/0:11,0:10:0:0,0,0	0/0:13,3:11:5.36:0,5,31	0/0:22,0:21:61.44:0,61,834	0/0:22,0:20:60.04:0,60,745	0/0:20,0:16:39.05:0,39,578	0/0:14,0:12:33.08:0,33,468
chr10	75518825	.	A	AG	411.05	PASS	AB=0.963;AC=8;AF=0.148;AN=54;BaseQRankSum=6.415;DP=561;FS=0.000;HRun=1;HaplotypeScore=82.0237;InbreedingCoeff=0.7414;MQ=49.91;MQ0=60;MQRankSum=-4.563;QD=5.41;ReadPosRankSum=-2.693;VQSLOD=-0.7596;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:19:34.34:0,34,492	0/0:10,0:10:28.64:0,29,375	0/1:23,1:7:5.74:6,0,89	0/0:39,0:8:14.02:0,14,140	0/0:10,0:9:22.30:0,22,262	0/0:19,0:19:53.95:0,54,706	0/0:34,0:32:78.22:0,78,1062	0/0:32,0:22:66.18:0,66,883	0/0:4,4:7:1.55:0,2,4	0/0:31,0:29:87.25:0,87,1130	0/0:19,0:17:38.81:0,39,447	1/1:4,10:13:26.26:319,26,0	1/1:4,4:7:14.63:170,15,0	0/0:15,0:13:21.07:0,21,292	0/0:24,0:24:68.97:0,69,899	0/0:27,0:25:69.23:0,69,956	0/0:21,0:18:51.17:0,51,706	0/0:22,0:19:47.95:0,48,639	0/0:13,0:6:18.06:0,18,250	0/0:15,0:15:45.15:0,45,627	0/0:23,0:21:56.36:0,56,738	./.	0/1:11,0:10:0:0,0,0	1/1:13,4:12:4.85:49,5,0	0/0:22,0:21:61.57:0,62,778	0/0:23,0:21:60.19:0,60,795	0/0:21,0:17:39.13:0,39,542	0/0:15,0:13:36.58:0,37,477
chr10	75518829	.	GA	G	243.33	PASS	AB=0.783;AC=5;AF=0.093;AN=54;BaseQRankSum=6.168;DP=587;FS=0.000;HRun=2;HaplotypeScore=85.1852;InbreedingCoeff=0.7915;MQ=54.30;MQ0=57;MQRankSum=-4.548;QD=5.93;ReadPosRankSum=-2.180;VQSLOD=-0.2185;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:22:50.13:0,50,590	0/0:10,0:10:26.12:0,26,365	0/0:33,0:10:18.91:0,19,234	0/0:49,0:13:20.81:0,21,249	0/0:12,0:11:27.72:0,28,286	0/0:20,0:20:56.22:0,56,808	0/0:35,0:33:85.53:0,86,1204	0/0:28,0:19:57.19:0,57,846	0/0:6,3:8:2.60:0,3,10	0/0:31,0:29:86.39:0,86,1077	0/0:21,0:19:44.16:0,44,455	1/1:8,6:13:19.79:216,20,0	1/1:6,3:7:15:141,15,0	0/0:19,0:17:33.10:0,33,467	0/0:25,0:25:68.08:0,68,924	0/0:26,0:26:69.22:0,69,1010	0/0:22,0:19:51.15:0,51,739	0/0:22,0:19:48.63:0,49,712	0/0:14,0:8:24.07:0,24,334	0/0:15,0:15:45.15:0,45,667	0/0:24,0:22:55.72:0,56,791	./.	0/0:11,0:10:0:0,0,0	0/1:13,5:13:1.51:2,0,2	0/0:20,0:19:55.88:0,56,758	0/0:23,0:21:60.04:0,60,750	0/0:21,0:17:39.05:0,39,573	0/0:14,0:12:36.09:0,36,513
chr10	75518830	.	A	AG	516.79	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=5.750;DP=592;FS=0.942;HRun=1;HaplotypeScore=86.7355;InbreedingCoeff=0.8461;MQ=54.39;MQ0=56;MQRankSum=-4.882;QD=9.94;ReadPosRankSum=-0.674;VQSLOD=1.0530;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:22:42.62:0,43,572	0/0:10,0:10:26.12:0,26,342	0/0:34,0:12:19.17:0,19,215	0/0:47,0:13:23.98:0,24,237	0/0:12,0:11:28.04:0,28,302	0/0:20,0:20:56.22:0,56,759	0/0:35,0:33:87.56:0,88,1145	0/0:29,0:20:57.19:0,57,792	0/0:4,5:8:1.55:0,2,4	0/0:32,0:30:87.22:0,87,1111	0/0:21,0:19:44.49:0,44,462	1/1:7,7:13:26.68:363,27,0	1/1:5,4:7:15.05:227,15,0	0/0:20,0:18:33.10:0,33,438	0/0:24,0:24:68.23:0,68,884	0/0:26,0:26:69.22:0,69,944	0/0:21,0:18:51.14:0,51,692	0/0:22,0:19:50.96:0,51,679	0/0:15,0:9:24.07:0,24,316	0/0:16,0:16:45.15:0,45,624	0/0:24,0:22:55.72:0,56,741	./.	0/1:11,0:10:0:0,0,0	1/1:10,8:13:4.58:55,5,0	0/0:20,0:19:55.88:0,56,713	0/0:23,0:21:60.19:0,60,797	0/0:20,0:16:39.13:0,39,535	0/0:16,0:14:36.12:0,36,496
chr10	75523086	.	CTGTGTGTGTGTGTG	C	2092.89	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=5.225;DP=601;FS=1.883;HRun=0;HaplotypeScore=215.4969;InbreedingCoeff=0.8332;MQ=67.16;MQ0=17;MQRankSum=-6.875;QD=18.85;ReadPosRankSum=-0.297;VQSLOD=2.0692;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:6:9.03:0,9,422	./.	0/0:36,0:21:0.47:0,0,1	0/0:17,0:25:33.11:0,33,1739	0/0:21,0:22:29.13:0,29,1262	0/0:22,0:25:33.58:0,34,1631	0/0:30,0:30:14.26:0,14,314	1/1:10,4:15:12.04:351,12,0	0/0:20,0:29:54.18:0,54,2562	0/0:11,0:11:11.96:0,12,689	1/1:13,13:26:21.07:728,21,0	1/1:10,6:17:15.05:557,15,0	0/0:23,0:23:30.10:0,30,1587	0/0:21,0:19:30.10:0,30,1764	0/0:10,0:14:12.04:0,12,757	0/0:28,0:29:54.19:0,54,2991	0/0:17,0:16:24.93:0,25,944	0/0:15,0:15:11.53:0,12,575	0/0:10,0:17:11.05:0,11,347	0/0:27,0:33:24.05:0,24,1260	1/1:12,3:16:6.02:223,6,0	1/1:10,4:16:9.03:280,9,0	1/1:16,4:20:3.01:117,3,0	0/0:15,0:21:21.06:0,21,800	0/0:21,0:25:34.92:0,35,1599	0/0:13,0:20:21.07:0,21,1112	0/0:15,0:15:9.03:0,9,433
chr10	75525094	.	CACTCATTTCGTG	C	7834	PASS	AB=0.964;AC=13;AF=0.232;AN=56;BaseQRankSum=13.143;DP=581;FS=18.997;HRun=0;HaplotypeScore=201.2141;InbreedingCoeff=0.8960;MQ=80.58;MQ0=1;MQRankSum=-13.210;QD=66.39;ReadPosRankSum=3.872;VQSLOD=3.1335;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:43:99:0,129,7102	0/0:12,0:12:36.12:0,36,2089	0/0:18,0:18:34.77:0,35,2652	0/0:17,0:17:48.16:0,48,2433	0/0:20,0:20:57.20:0,57,3483	0/0:20,0:20:60.21:0,60,3629	0/0:21,0:21:60.18:0,60,3276	0/0:30,0:30:87.28:0,87,4897	1/1:1,13:13:27.09:1025,27,0	0/0:21,0:21:63.21:0,63,3706	0/0:22,0:22:60.21:0,60,3693	1/1:2,13:15:39.13:1481,39,0	1/1:2,20:22:57.20:2164,57,0	0/0:20,0:20:60.21:0,60,3484	0/0:27,0:27:81.26:0,81,4429	0/1:26,1:27:35.46:35,0,4201	0/0:12,0:12:33.11:0,33,1942	0/0:17,0:17:51.18:0,51,3058	0/0:27,0:27:81.28:0,81,4617	0/0:23,0:23:63.22:0,63,3547	0/0:25,0:25:75.26:0,75,4404	1/1:0,17:17:51.17:1859,51,0	1/1:6,9:15:17.74:683,18,0	1/1:0,8:8:17.98:586,18,0	0/0:23,0:23:69.23:0,69,3932	0/0:29,0:29:87.30:0,87,5344	0/0:26,0:25:78.23:0,78,4178	0/0:10,0:10:30.10:0,30,1829
chr10	75528484	.	GA	G	4069.70	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.105;DP=637;FS=37.573;HRun=7;HaplotypeScore=58.9632;InbreedingCoeff=0.9985;MQ=83.81;MQ0=0;MQRankSum=-2.698;QD=25.44;ReadPosRankSum=1.361;VQSLOD=1.4161;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:27:72.16:734,72,0	0/0:9,0:9:27.09:0,27,340	0/0:19,0:19:47.92:0,48,518	0/0:19,0:19:19.07:0,19,450	0/0:21,0:21:57.17:0,57,705	0/0:27,0:27:78.24:0,78,968	0/0:19,0:19:54.15:0,54,655	0/0:40,0:40:93.29:0,93,1160	1/1:1,22:23:57.13:581,57,0	0/0:29,0:29:81.25:0,81,1009	0/0:11,0:11:33.11:0,33,415	1/1:1,22:23:57.13:581,57,0	1/1:2,22:25:54.12:551,54,0	0/0:27,0:27:69.22:0,69,868	0/0:19,0:19:54.17:0,54,679	0/0:23,0:23:66.20:0,66,818	0/0:29,0:29:71.32:0,71,959	0/0:18,0:18:51.11:0,51,623	0/0:15,0:15:33.11:0,33,415	0/0:24,0:24:66.18:0,66,795	0/0:36,0:36:99:0,99,1218	1/1:1,19:20:57.13:581,57,0	1/1:1,16:17:42.10:428,42,0	1/1:1,24:25:60.13:612,60,0	0/0:24,0:24:63.20:0,63,792	0/0:29,0:29:78.25:0,78,978	0/0:29,0:29:78.25:0,78,981	0/0:10,0:10:30.10:0,30,377
chr10	75528911	.	A	ATGTTTTGTTT	8550.72	PASS	AB=0.909;AC=13;AF=0.232;AN=56;BaseQRankSum=-0.476;DP=789;FS=0.000;HRun=0;HaplotypeScore=232.8264;InbreedingCoeff=0.6977;MQ=75.50;MQ0=3;MQRankSum=-11.929;QD=38.52;ReadPosRankSum=-5.266;VQSLOD=3.4007;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:76.07:0,76,3004	0/0:9,0:9:15.05:0,15,450	0/0:29,0:24:11.90:0,12,207	0/0:48,0:36:15.44:0,15,297	0/0:25,0:25:54.15:0,54,1339	0/0:18,0:18:39.13:0,39,1171	0/0:31,0:31:48.15:0,48,1300	0/0:33,0:33:51.17:0,51,1129	1/1:15,12:28:36.12:1661,36,0	0/0:30,0:30:63.22:0,63,1872	0/0:15,0:16:36.11:0,36,957	1/1:15,17:34:48.12:2146,48,0	1/1:22,9:31:42.10:1776,42,0	0/0:21,0:21:42.14:0,42,1203	0/0:40,0:40:72.25:0,72,2097	0/1:26,1:27:99:102,0,1223	0/0:40,0:40:86.02:0,86,2424	0/1:36,0:36:9.04:9,0,1744	0/0:19,0:19:24.08:0,24,675	0/0:21,0:21:39.12:0,39,1056	0/0:27,0:27:44.93:0,45,1275	1/1:12,6:19:27.05:802,27,0	1/1:11,6:18:24.04:903,24,0	0/1:20,8:28:99:1152,0,144	0/0:24,0:24:42.12:0,42,1193	0/0:30,0:30:45.15:0,45,1252	0/0:27,0:27:60.16:0,60,1623	0/0:26,0:26:51.13:0,51,1380
chr10	75530151	.	CCTT	C	5382.25	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.823;DP=579;FS=7.840;HRun=0;HaplotypeScore=82.2965;InbreedingCoeff=0.9993;MQ=76.34;MQ0=0;MQRankSum=-1.802;QD=43.06;ReadPosRankSum=2.602;VQSLOD=6.4677;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.25:0,78,1669	0/0:8,0:8:24.08:0,24,544	0/0:17,0:16:39.13:0,39,796	0/0:10,0:10:27.09:0,27,567	0/0:36,0:36:99:0,108,2374	0/0:24,0:24:72.25:0,72,1605	0/0:15,0:15:45.14:0,45,943	0/0:30,0:30:84.29:0,84,1842	1/1:1,15:16:45.15:748,45,0	0/0:22,0:22:66.23:0,66,1459	0/0:26,0:26:78.27:0,78,1745	1/1:1,13:14:33.11:550,33,0	1/1:2,21:23:60.20:987,60,0	0/0:17,0:17:51.18:0,51,1123	0/0:16,0:16:45.15:0,45,1019	0/0:13,0:13:39.13:0,39,845	0/0:16,0:16:48.16:0,48,1067	0/0:13,0:13:39.13:0,39,840	0/0:26,0:26:66.23:0,66,1483	0/0:34,0:34:98.90:0,99,2083	0/0:13,0:13:36.12:0,36,793	1/1:0,22:22:60.20:973,60,0	1/1:1,27:28:78.18:1225,78,0	1/1:0,22:22:54.18:900,54,0	0/0:20,0:20:60.19:0,60,1308	0/0:19,0:19:57.19:0,57,1232	0/0:33,0:33:93.30:0,93,2055	0/0:19,0:19:57.18:0,57,1249
chr10	75534119	.	AG	A	6208.36	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.314;DP=724;FS=15.795;HRun=1;HaplotypeScore=70.5952;InbreedingCoeff=0.9999;MQ=90.72;MQ0=0;MQRankSum=-5.135;QD=38.56;ReadPosRankSum=3.811;VQSLOD=3.7193;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1763	0/0:10,0:10:30.09:0,30,456	0/0:26,0:26:75.21:0,75,1138	0/0:30,0:30:84.17:0,84,1201	0/0:22,0:22:66.13:0,66,1001	0/0:22,0:22:66.23:0,66,1055	0/0:21,0:21:63.21:0,63,1007	0/0:39,0:39:99:0,114,1740	1/1:0,19:19:54.18:755,54,0	0/0:22,0:22:66.22:0,66,1033	0/0:12,0:12:36.12:0,36,573	1/1:0,39:39:99:1552,111,0	1/1:0,20:20:54.18:755,54,0	0/0:21,0:21:60.20:0,60,956	0/0:38,0:38:99:0,114,1822	0/0:20,0:20:60.19:0,60,935	0/0:24,0:24:72.25:0,72,1151	0/0:20,0:20:60.20:0,60,959	0/0:20,0:20:60.13:0,60,908	0/0:25,0:25:75.26:0,75,1196	0/0:37,0:37:99:0,111,1774	1/1:0,21:21:63.21:881,63,0	1/1:0,39:39:99:1384,99,0	1/1:0,23:23:63.21:881,63,0	0/0:33,0:33:99:0,99,1578	0/0:35,0:34:99:0,102,1606	0/0:30,0:30:90.31:0,90,1436	0/0:18,0:18:54.18:0,54,862
chr10	75535003	.	A	ATT	2013.12	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-0.722;DP=494;FS=9.625;HRun=10;HaplotypeScore=74.2110;InbreedingCoeff=0.8789;MQ=66.90;MQ0=3;MQRankSum=-1.586;QD=26.49;ReadPosRankSum=-0.942;VQSLOD=2.6250;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.09:0,96,962	0/0:12,0:12:36.08:0,36,366	0/0:14,0:12:12.58:0,13,140	0/0:17,0:12:8.32:0,8,69	0/0:32,0:32:67.45:0,67,793	0/0:18,0:19:50.84:0,51,494	0/1:6,0:6:14.34:14,0,52	0/0:35,0:35:84.97:0,85,844	1/1:1,4:7:14.53:171,15,0	0/0:19,0:19:45.04:0,45,446	0/0:19,0:19:48.05:0,48,473	1/1:3,8:12:24.08:348,24,0	1/1:2,6:8:21.07:298,21,0	0/0:10,0:10:21.04:0,21,213	0/0:19,0:19:48.10:0,48,488	0/0:12,0:12:36.08:0,36,366	0/0:17,0:19:32.62:0,33,369	0/0:19,0:19:48.09:0,48,487	0/0:16,0:17:25.06:0,25,384	0/0:16,0:16:23.91:0,24,227	0/0:17,0:17:42.02:0,42,426	1/1:1,13:14:24.08:358,24,0	1/1:3,13:17:45.15:649,45,0	1/1:5,6:11:27.46:363,27,0	0/0:24,0:24:56.99:0,57,575	0/0:28,0:28:58.58:0,59,599	0/0:22,0:22:25.61:0,26,406	0/0:13,0:13:33.01:0,33,326
chr10	75538430	.	A	ACG	662.49	PASS	AB=0.833;AC=11;AF=0.196;AN=56;BaseQRankSum=7.516;DP=562;FS=3.558;HRun=0;HaplotypeScore=111.4116;InbreedingCoeff=0.8965;MQ=62.42;MQ0=1;MQRankSum=-3.360;QD=4.91;ReadPosRankSum=-1.484;VQSLOD=2.6124;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:36.11:0,36,524	0/0:6,0:6:18.06:0,18,275	0/0:18,0:14:39.12:0,39,574	0/0:17,0:13:29.55:0,30,370	0/0:22,0:22:63.21:0,63,960	0/0:5,0:5:12.04:0,12,184	0/0:23,0:23:63.21:0,63,965	0/0:12,0:12:33.09:0,33,464	1/1:9,5:14:11.95:142,12,0	0/0:20,0:20:57.14:0,57,829	0/0:17,0:17:42.14:0,42,643	1/1:21,4:24:32.61:262,33,0	1/1:1,26:27:12.04:165,12,0	0/0:13,0:13:39.11:0,39,553	0/0:12,0:11:27.09:0,27,413	0/0:11,0:11:29.90:0,30,459	0/0:30,0:30:54.03:0,54,1163	0/0:36,0:35:99:0,102,1548	0/0:15,0:15:42.12:0,42,617	0/0:8,0:8:24.08:0,24,366	0/0:60,0:60:99:0,169,2474	1/1:18,6:23:8.54:52,9,0	0/1:12,3:15:1.81:13,0,2	1/1:22,8:30:20.71:199,21,0	0/0:29,0:28:70.91:0,71,1100	0/0:21,0:21:54.18:0,54,825	0/0:11,0:11:33.10:0,33,484	0/0:7,0:7:21.02:0,21,255
chr10	75538455	.	C	CACACAT	700.76	PASS	AB=0.931;AC=11;AF=0.204;AN=54;BaseQRankSum=6.431;DP=483;FS=1.042;HRun=0;HaplotypeScore=123.0754;InbreedingCoeff=0.7006;MQ=59.22;MQ0=8;MQRankSum=-3.362;QD=7.01;ReadPosRankSum=-0.389;VQSLOD=1.8796;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:25:0.01:1,0,0	0/0:9,0:9:24.08:0,24,537	0/0:13,0:6:3.46:0,3,25	0/1:18,0:9:27.46:33,0,27	0/0:23,0:23:60.07:0,60,1245	0/0:4,0:4:9.03:0,9,230	0/0:21,0:21:60.21:0,60,1531	0/0:16,0:16:19.25:0,19,305	1/1:4,2:8:12.01:174,12,0	0/0:20,0:20:54.16:0,54,1127	0/0:18,0:17:37.92:0,38,759	1/1:3,3:5:9.03:225,9,0	1/1:2,5:7:11.80:300,12,0	0/0:11,0:10:27.08:0,27,613	0/0:8,0:6:18.06:0,18,458	0/0:7,0:7:18.06:0,18,457	0/0:32,0:32:78.72:0,79,1827	0/0:39,0:38:99:0,102,2363	0/0:16,0:16:39.13:0,39,883	0/0:9,0:9:23.93:0,24,367	0/0:55,0:54:99:0,135,3051	0/1:14,4:18:0:0,0,0	./.	1/1:9,5:15:6.01:113,6,0	0/0:34,0:34:93.32:0,93,2238	0/0:20,0:20:57.19:0,57,1336	0/0:12,0:12:30.09:0,30,644	0/0:9,0:8:12.04:0,12,263
chr10	75538488	.	GCGCACACACGCACACGCGCACACACGCACACGCGCGCGCACACACACACA	G	60.40	PASS	AB=1.000;AC=6;AF=0.111;AN=54;BaseQRankSum=3.941;DP=483;FS=2.766;HRun=0;HaplotypeScore=440.2649;InbreedingCoeff=0.4555;MQ=59.20;MQ0=9;MQRankSum=-4.529;QD=1.08;ReadPosRankSum=-1.490;VQSLOD=0.5505;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:6.29:0,6,848	0/0:8,0:8:17.99:0,18,726	0/0:22,0:7:1.08:0,1,127	0/1:35,0:10:1.03:1,0,380	0/0:13,0:13:39.08:0,39,2355	0/0:6,0:6:12.04:0,12,1062	0/0:22,0:22:63.18:0,63,3931	0/0:15,0:15:44.94:0,45,1959	1/1:8,0:7:4.73:86,5,0	0/0:18,0:18:51.16:0,51,4537	0/0:15,0:15:39.08:0,39,2217	1/1:6,0:6:4.52:24,5,0	0/1:6,0:6:40.41:56,0,40	0/0:8,0:8:24.08:0,24,2947	0/0:3,0:3:9.03:0,9,1003	0/0:7,0:7:21.07:0,21,2133	0/0:31,0:31:72.58:0,73,6866	0/0:35,0:35:99:0,99,7480	0/0:20,0:20:60.08:0,60,3272	0/0:5,0:5:15.05:0,15,1205	0/0:60,0:59:99:0,167,12388	0/0:4,20:24:0.47:0,0,1	0/0:0,12:12:0.47:0,0,1	./.	0/0:20,0:20:60.10:0,60,3686	0/0:24,0:24:72.08:0,72,4749	0/0:9,0:9:27.02:0,27,2524	0/0:13,0:13:39.13:0,39,3109
chr10	75538510	.	A	ACGCG	204.67	PASS	AB=0.909;AC=3;AF=0.058;AN=52;BaseQRankSum=1.998;DP=497;FS=1.861;HRun=0;HaplotypeScore=103.8443;InbreedingCoeff=0.5316;MQ=49.15;MQ0=17;MQRankSum=-0.804;QD=5.39;ReadPosRankSum=0.002;VQSLOD=2.1789;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,11:28:10.98:270,11,0	0/0:8,0:8:15.03:0,15,252	0/0:24,0:3:8.96:0,9,101	0/0:37,0:6:11.98:0,12,168	0/0:10,0:10:27.08:0,27,504	0/0:7,0:7:15.05:0,15,299	0/0:26,0:25:60.19:0,60,1149	0/0:14,0:12:36.11:0,36,632	0/1:9,0:9:7.78:32,0,8	0/0:16,0:16:45.05:0,45,855	0/0:12,0:12:24.08:0,24,399	0/0:9,0:9:2.87:0,3,15	0/0:8,0:8:8.01:0,8,75	0/0:17,0:15:39.12:0,39,728	0/0:4,0:4:12.01:0,12,170	0/0:8,0:8:24.07:0,24,444	0/0:36,0:36:98.05:0,98,1728	0/0:33,0:33:86.64:0,87,1586	0/0:16,0:16:42.09:0,42,719	0/0:9,0:9:24.01:0,24,426	0/0:53,0:52:99:0,144,2636	0/0:23,0:23:0.52:0,1,1	./.	./.	0/0:19,0:19:54.15:0,54,1006	0/0:19,0:18:51.16:0,51,951	0/0:9,0:9:27.09:0,27,538	0/0:13,0:11:30.10:0,30,592
chr10	75538526	.	GCA	G	225.22	PASS	AB=0.936;AC=14;AF=0.269;AN=52;BaseQRankSum=4.031;DP=499;FS=1.768;HRun=0;HaplotypeScore=87.2548;InbreedingCoeff=-0.1390;MQ=48.42;MQ0=15;MQRankSum=0.580;QD=0.96;ReadPosRankSum=-1.019;VQSLOD=1.5598;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,2:24:35.29:58,0,35	0/0:5,0:5:3.01:0,3,45	./.	./.	0/0:11,2:13:9.03:0,9,135	0/0:8,0:8:9.50:0,9,120	0/0:23,0:22:5.09:0,5,142	0/0:13,0:10:2.97:0,3,20	1/1:12,0:11:4.51:23,5,0	0/0:21,0:21:27.03:0,27,325	0/0:9,0:9:12.03:0,12,148	0/0:14,0:14:2.97:0,3,24	0/0:11,0:11:8.85:0,9,47	0/1:17,0:16:17.77:18,0,164	0/0:4,0:3:3.01:0,3,45	0/1:8,0:8:17.69:18,0,127	0/0:38,0:41:21.49:0,21,761	0/0:33,1:34:18.60:0,19,557	0/1:13,1:14:23.82:24,0,43	0/1:4,2:6:13.95:57,0,14	0/1:50,2:54:67.73:68,0,350	1/1:25,0:25:0.47:1,0,0	0/1:17,0:17:0.08:0,0,0	0/1:17,3:19:12.96:14,0,13	0/0:16,2:18:0.25:0,0,339	0/1:22,0:21:31.54:32,0,119	0/0:10,0:10:9.03:0,9,135	0/1:14,0:12:47:47,0,115
chr10	75540969	.	AC	A	804.29	PASS	AB=0.663;AC=6;AF=0.107;AN=56;BaseQRankSum=10.638;DP=501;FS=7.080;HRun=1;HaplotypeScore=75.1460;InbreedingCoeff=-0.1106;MQ=55.89;MQ0=12;MQRankSum=-6.694;QD=10.58;ReadPosRankSum=-0.894;VQSLOD=0.9109;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.16:0,90,1305	0/0:9,0:9:25.30:0,25,345	0/0:12,0:7:17.99:0,18,216	0/0:16,0:7:18.04:0,18,253	0/0:23,0:23:66.19:0,66,966	0/0:26,0:24:69.22:0,69,1050	0/0:16,0:16:48.15:0,48,722	0/0:28,0:28:84.23:0,84,1240	0/1:3,6:9:15.88:135,0,16	0/0:17,0:16:45.15:0,45,698	0/0:21,0:21:54.17:0,54,814	0/1:4,4:8:44.07:90,0,44	0/1:6,2:8:22.59:84,0,23	0/0:5,0:5:15.05:0,15,234	0/0:17,0:17:50.99:0,51,695	0/0:20,0:20:54.11:0,54,796	0/0:26,0:26:74.28:0,74,1113	0/0:21,0:21:59.23:0,59,884	0/0:19,0:18:48.16:0,48,711	0/0:19,0:19:52.41:0,52,768	0/0:13,0:13:39.12:0,39,562	0/1:9,16:25:90.37:358,0,90	0/1:6,8:12:32.24:151,0,32	0/1:6,6:12:45.17:111,0,45	0/0:20,0:20:57.19:0,57,895	0/0:25,0:25:72.24:0,72,1091	0/0:25,0:24:72.22:0,72,1075	0/0:14,0:14:39.13:0,39,586
chr10	75540972	.	AC	A	437.54	PASS	AB=0.635;AC=6;AF=0.107;AN=56;BaseQRankSum=11.199;DP=505;FS=11.993;HRun=1;HaplotypeScore=78.6170;InbreedingCoeff=-0.1123;MQ=56.91;MQ0=13;MQRankSum=-7.752;QD=6.43;ReadPosRankSum=-0.079;VQSLOD=-0.7121;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.28:0,87,1307	0/0:10,0:10:28.34:0,28,406	0/0:16,0:9:14.22:0,14,198	0/0:16,1:7:18.04:0,18,240	0/0:21,0:21:63.19:0,63,940	0/0:26,0:24:69.15:0,69,1044	0/0:17,0:17:48.15:0,48,722	0/0:30,0:30:84.27:0,84,1245	0/1:3,2:9:15.44:102,0,15	0/0:19,0:18:48.16:0,48,743	0/0:21,0:21:57.16:0,57,835	0/1:3,3:7:38.98:39,0,63	0/1:3,2:5:29.28:29,0,53	0/0:5,0:5:15.05:0,15,233	0/0:18,0:18:48.14:0,48,719	0/0:20,0:20:54.12:0,54,805	0/0:27,0:27:77.21:0,77,1094	0/0:21,0:21:60.20:0,60,924	0/0:20,0:19:51.16:0,51,741	0/0:19,0:19:52.42:0,52,785	0/0:12,0:12:33:0,33,448	0/1:8,8:23:99:241,0,107	0/1:7,7:13:90.87:100,0,91	0/1:3,4:9:50.62:51,0,63	0/0:20,0:20:57.19:0,57,895	0/0:26,0:26:78.26:0,78,1174	0/0:27,0:25:72.18:0,72,1060	0/0:14,0:14:39.13:0,39,586
chr10	75540978	.	ACAAAAAAC	A	1884.02	PASS	AB=0.834;AC=7;AF=0.125;AN=56;BaseQRankSum=11.103;DP=535;FS=18.873;HRun=0;HaplotypeScore=145.4969;InbreedingCoeff=-0.0780;MQ=58.09;MQ0=11;MQRankSum=-7.463;QD=20.04;ReadPosRankSum=0.143;VQSLOD=1.3483;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:85.83:0,86,1540	0/0:10,0:10:29.13:0,29,703	0/0:17,0:11:17.88:0,18,311	0/1:14,0:4:5.86:6,0,106	0/0:23,0:23:69.18:0,69,1794	0/0:29,0:27:78.23:0,78,2317	0/0:19,0:19:54.17:0,54,1678	0/0:27,0:27:75.15:0,75,1614	0/1:11,2:13:94.49:319,0,94	0/0:21,0:20:60.17:0,60,1431	0/0:19,0:19:51.14:0,51,1650	0/1:5,2:7:5.98:257,0,6	0/1:3,1:4:65.72:66,0,88	0/0:6,0:6:18.06:0,18,554	0/0:24,0:24:72.07:0,72,1843	0/0:19,0:19:25.42:0,25,1500	0/0:29,0:29:83.34:0,83,2610	0/0:21,0:21:63.20:0,63,2101	0/0:21,0:20:54.49:0,54,1069	0/0:18,0:18:54.16:0,54,1717	0/0:9,0:9:23.84:0,24,765	0/1:17,7:24:80:685,0,80	0/1:13,6:17:99:493,0,137	0/1:11,1:12:35.20:186,0,35	0/0:20,0:20:60.15:0,60,2076	0/0:28,0:28:84.22:0,84,2219	0/0:32,0:30:87.29:0,87,2480	0/0:17,0:17:45.15:0,45,1392
chr10	75540986	.	C	CAA	1234.10	PASS	AB=0.915;AC=15;AF=0.268;AN=56;BaseQRankSum=6.108;DP=574;FS=14.831;HRun=12;HaplotypeScore=93.0484;InbreedingCoeff=0.7188;MQ=59.97;MQ0=9;MQRankSum=-3.598;QD=8.63;ReadPosRankSum=-0.315;VQSLOD=0.2629;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:34:57.69:0,58,253	0/0:9,0:11:17.35:0,17,181	0/0:23,0:17:8.04:0,8,187	0/1:14,0:3:9.39:9,0,28	0/0:22,1:23:11.83:0,12,416	0/0:29,0:28:62.72:0,63,567	0/0:16,0:19:35.57:0,36,356	0/0:27,0:27:35.44:0,35,444	1/1:8,2:12:26.49:272,26,0	0/0:23,0:22:46.21:0,46,411	0/1:16,1:20:3.51:4,0,325	1/1:4,7:11:16.23:165,16,0	1/1:2,4:6:6:57,6,0	0/0:14,0:14:32.16:0,32,248	0/0:19,0:20:53.92:0,54,481	0/0:21,0:21:44.35:0,44,384	0/0:29,0:32:50.53:0,51,599	0/0:21,0:21:50.09:0,50,471	0/0:16,0:18:38.44:0,38,322	0/0:18,0:18:48:0,48,438	0/0:9,0:12:26.16:0,26,201	1/1:20,2:22:38.14:369,38,0	1/1:11,9:22:42.35:417,42,0	1/1:6,7:13:8.84:116,9,0	0/1:18,1:21:7.31:7,0,333	0/0:26,0:30:59.60:0,60,556	0/0:35,0:35:64.68:0,65,668	0/0:14,0:17:23.67:0,24,309
chr10	75541659	.	CA	C	684.55	PASS	AB=0.923;AC=16;AF=0.286;AN=56;BaseQRankSum=8.891;DP=557;FS=2.528;HRun=16;HaplotypeScore=84.6411;InbreedingCoeff=0.5950;MQ=74.77;MQ0=6;MQRankSum=1.690;QD=3.13;ReadPosRankSum=7.859;VQSLOD=0.1054;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:33,4:38:1.52:2,0,300	0/0:6,0:9:11.74:0,12,76	0/1:32,0:16:8.71:9,0,26	0/0:25,1:16:4.09:0,4,18	0/0:24,1:25:6.03:0,6,221	0/0:19,2:20:31.61:0,32,232	0/0:18,0:18:31.39:0,31,239	0/0:16,0:16:11.82:0,12,150	1/1:17,11:28:34.64:211,35,0	0/0:16,1:20:14.41:0,14,187	0/1:16,2:18:6.73:7,0,126	1/1:17,9:26:19.08:154,19,0	1/1:8,7:15:0.05:59,0,0	0/0:22,0:22:40.23:0,40,285	0/0:14,0:14:20.85:0,21,254	0/0:19,0:23:26.73:0,27,198	0/0:17,0:17:26.48:0,26,187	0/0:22,0:22:34.53:0,35,251	0/0:9,0:8:5.90:0,6,41	0/0:12,1:13:10.34:0,10,148	0/0:23,0:23:29.58:0,30,217	1/1:7,12:20:19.01:148,19,0	1/1:9,12:21:23.10:161,23,0	1/1:2,8:11:19.30:108,19,0	0/0:10,0:10:8.36:0,8,69	0/0:27,0:26:33.06:0,33,284	0/0:18,1:19:8.75:0,9,152	0/1:7,1:10:0.35:0,0,83
chr10	75541673	.	A	AG	1621.95	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.813;DP=572;FS=7.149;HRun=0;HaplotypeScore=77.1402;InbreedingCoeff=0.9806;MQ=63.35;MQ0=21;MQRankSum=1.096;QD=13.86;ReadPosRankSum=5.850;VQSLOD=4.6304;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:90.06:0,90,800	0/0:9,0:9:16.45:0,16,122	0/0:37,0:9:8.01:0,8,125	0/0:38,0:14:18.61:0,19,92	0/0:26,0:26:60.62:0,61,545	0/0:16,0:15:40.69:0,41,368	0/0:17,0:17:48.87:0,49,482	0/0:17,0:15:36.14:0,36,324	1/1:20,1:21:55.99:350,56,0	0/0:25,0:24:56.10:0,56,513	0/0:21,0:21:48.67:0,49,438	1/1:26,1:27:67.82:472,68,0	1/1:16,1:17:37.65:253,38,0	0/0:22,0:22:59.34:0,59,498	0/0:17,0:17:45.98:0,46,435	0/0:27,0:27:64.14:0,64,574	0/0:20,0:20:52.67:0,53,449	0/0:18,0:18:47.48:0,47,432	0/0:12,0:10:29.21:0,29,253	0/0:15,0:14:37.54:0,38,268	0/0:20,0:20:38.80:0,39,485	1/1:20,1:21:32.08:284,32,0	1/1:13,0:13:34.63:219,35,0	1/1:18,0:17:37.49:231,37,0	0/0:11,0:11:30.48:0,30,276	0/0:24,0:23:65.92:0,66,643	0/0:19,0:19:52.61:0,53,430	0/0:8,0:8:20.46:0,20,177
chr10	75546955	.	G	GACGAGAT	11218.87	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-8.176;DP=619;FS=0.410;HRun=0;HaplotypeScore=134.9616;InbreedingCoeff=0.9995;MQ=82.41;MQ0=0;MQRankSum=-14.885;QD=89.75;ReadPosRankSum=0.594;VQSLOD=5.5181;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.24:0,90,2228	0/0:11,0:11:33.11:0,33,876	0/0:23,0:23:48.60:0,49,1485	0/0:16,0:16:38.66:0,39,950	0/0:26,0:26:72.21:0,72,1783	0/0:27,0:27:81.24:0,81,2069	0/0:23,0:23:66.23:0,66,1778	0/0:45,0:45:99:0,123,3123	1/1:4,22:27:72.25:2911,72,0	0/0:29,0:29:87.25:0,87,2230	0/0:19,0:19:54.19:0,54,1447	1/1:3,13:18:39.13:1587,39,0	1/1:6,13:24:54.19:2123,54,0	0/0:21,0:21:60.19:0,60,1555	0/0:23,0:23:69.24:0,69,1829	0/0:14,0:14:42.14:0,42,1101	0/0:24,0:24:72.25:0,72,1908	0/0:24,0:24:72.25:0,72,1941	0/0:19,0:19:57.18:0,57,1417	0/0:18,0:18:54.19:0,54,1424	0/0:25,0:25:75.24:0,75,1929	1/1:2,18:24:51.17:2066,51,0	1/1:4,10:14:30.10:1212,30,0	1/1:4,10:17:33.11:1320,33,0	0/0:30,0:30:87.23:0,87,2117	0/0:19,0:19:54.18:0,54,1402	0/0:18,0:18:54.19:0,54,1455	0/0:9,0:9:27.05:0,27,612
chr10	75549633	.	A	ACCTGCCCT	7091.43	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-6.793;DP=763;FS=13.106;HRun=0;HaplotypeScore=190.0365;InbreedingCoeff=0.9568;MQ=65.49;MQ0=0;MQRankSum=-12.187;QD=33.29;ReadPosRankSum=2.484;VQSLOD=3.8903;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,28:42:36.05:1137,36,0	0/0:14,0:14:33.06:0,33,624	0/0:23,0:23:35.25:0,35,629	0/0:16,0:16:34.96:0,35,578	0/0:19,0:19:51.13:0,51,1079	0/0:12,0:12:33.07:0,33,669	0/0:34,0:34:87.08:0,87,1598	0/0:25,0:25:45.08:0,45,636	1/1:6,21:31:42.14:1748,42,0	0/0:40,0:40:81.24:0,81,1804	0/0:11,0:11:20.97:0,21,381	1/1:6,24:35:51.18:2104,51,0	1/1:7,25:35:33.35:1387,33,0	0/0:39,0:39:90.37:0,90,2096	0/0:29,0:29:83.98:0,84,1693	0/0:13,0:13:39.11:0,39,916	0/0:32,0:32:86.99:0,87,1711	0/0:46,0:46:99:0,114,2623	0/0:28,0:28:65.43:0,65,881	0/0:13,0:13:23.08:0,23,639	0/0:88,0:87:99:0,228,4844	1/1:6,17:23:11.20:189,11,0	1/1:4,7:13:5.56:153,6,0	1/1:13,19:34:9:374,9,0	0/0:21,0:21:48.08:0,48,959	0/0:23,0:23:51.11:0,51,1108	0/0:18,0:18:41.24:0,41,770	0/0:6,0:6:15.05:0,15,394
chr10	75553245	.	ATGGCCAGTAGTGATGCCCTTG	A	3736.56	PASS	AC=16;AF=0.571;AN=28;BaseQRankSum=6.010;DP=426;FS=0.000;HRun=0;HaplotypeScore=75.0303;InbreedingCoeff=0.7292;MQ=13.07;MQ0=322;MQRankSum=-1.612;QD=103.79;ReadPosRankSum=2.101;VQSLOD=2.7581;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,2:2:6.02:350,6,0	./.	./.	./.	./.	./.	0/0:22,0:4:6.02:0,6,444	./.	1/1:1,5:4:9.03:524,9,0	./.	./.	1/1:2,2:4:6.02:350,6,0	1/1:1,2:2:6.02:350,6,0	1/1:1,6:6:15.05:874,15,0	1/1:3,4:5:12.04:690,12,0	1/1:1,3:4:9.03:521,9,0	1/1:1,1:2:3.01:78,3,0	0/0:27,0:2:6.02:0,6,600	0/0:49,0:10:24.08:0,24,2015	./.	0/0:129,0:6:5.67:0,6,286	./.	./.	./.	./.	0/0:43,0:12:21.07:0,21,1866	0/0:57,0:20:21.06:0,21,1931	./.
chr10	75553344	.	GTGTA	G	2756.81	PASS	AB=0.955;AC=12;AF=0.429;AN=28;BaseQRankSum=-3.868;DP=437;FS=5.662;HRun=0;HaplotypeScore=79.5223;InbreedingCoeff=0.4821;MQ=23.67;MQ0=180;MQRankSum=3.558;QD=10.85;ReadPosRankSum=-0.753;VQSLOD=1.8390;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:7:0:0,0,0	./.	./.	./.	./.	./.	0/0:17,0:7:2.96:0,3,19	./.	./.	0/0:1,0:1:3.01:0,3,49	./.	0/0:13,0:7:3.01:0,3,36	0/0:13,0:11:3.01:0,3,36	0/0:18,0:14:3.01:0,3,35	./.	./.	0/0:7,0:6:2.94:0,3,18	0/0:24,0:14:5.98:0,6,56	1/1:34,14:17:42.12:611,42,0	1/1:3,15:16:22.16:575,22,0	1/1:83,13:55:42.14:641,42,0	./.	./.	./.	./.	1/1:27,9:22:8.34:595,8,0	0/1:18,2:9:12.93:40,0,13	1/1:8,15:16:27.09:412,27,0
chr10	75553402	.	GTGTA	G	113.12	PASS	AB=1.000;AC=13;AF=0.361;AN=36;BaseQRankSum=0.129;DP=499;FS=13.295;HRun=0;HaplotypeScore=112.1680;InbreedingCoeff=0.2749;MQ=31.21;MQ0=80;MQRankSum=-0.333;QD=0.75;ReadPosRankSum=-2.919;VQSLOD=0.8801;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:13:0.77:0,1,31	0/1:6,0:3:0:0,0,0	./.	./.	./.	./.	0/0:18,0:13:15.05:0,15,187	./.	1/1:8,0:6:0.47:2,0,0	1/1:8,0:3:2.54:50,3,0	./.	0/1:15,0:11:0:0,0,0	0/0:15,0:14:0.47:0,0,1	0/0:21,0:20:0.12:0,0,1	0/1:15,0:12:0:0,0,0	./.	0/1:11,0:9:18.93:34,0,19	0/0:29,0:24:34.41:0,34,580	0/0:36,0:16:15.80:0,16,117	0/1:33,0:26:45.97:46,0,148	0/0:85,0:78:19.55:0,20,343	./.	./.	./.	1/1:8,0:5:5.94:74,6,0	0/0:42,0:33:32.06:0,32,303	0/1:26,0:25:1.21:7,0,1	0/1:21,0:18:1.02:1,0,36
chr10	75553411	.	T	TATGC	2444.04	PASS	AB=1.000;AC=17;AF=0.472;AN=36;BaseQRankSum=-2.259;DP=457;FS=6.669;HRun=0;HaplotypeScore=91.5817;InbreedingCoeff=0.3158;MQ=31.05;MQ0=90;MQRankSum=2.089;QD=8.34;ReadPosRankSum=-1.368;VQSLOD=1.4623;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:10:11.80:13,0,12	1/1:6,0:3:2.96:20,3,0	./.	./.	./.	./.	0/1:18,0:12:12.94:51,0,13	./.	0/0:8,0:6:0:0,0,0	0/0:8,0:2:1.82:0,2,5	./.	0/0:12,0:8:0:0,0,0	./.	0/0:17,0:16:0:0,0,0	0/0:11,0:8:0:0,0,0	./.	0/0:11,0:9:7.14:0,7,31	0/1:29,0:25:49.22:49,0,164	1/1:29,1:15:38.98:409,39,0	1/1:31,0:24:44.55:319,45,0	1/1:24,56:75:61.72:924,62,0	0/0:10,0:8:2.80:0,3,13	./.	./.	0/0:6,0:4:5.70:0,6,29	1/1:38,0:28:48:506,48,0	1/1:6,19:23:2.96:19,3,0	1/1:20,0:17:29.91:250,30,0
chr10	75553642	.	T	TACAC	2674.45	PASS	AB=1.000;AC=33;AF=0.688;AN=48;BaseQRankSum=-3.127;DP=252;FS=12.296;HRun=0;HaplotypeScore=281.4595;InbreedingCoeff=0.1204;MQ=37.94;MQ0=0;MQRankSum=0.917;QD=11.48;ReadPosRankSum=2.547;VQSLOD=1.4382;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:29.33:36,0,29	0/0:3,0:3:3.24:0,3,15	./.	0/1:4,0:3:0:0,0,0	0/1:15,0:15:1.77:2,0,6	0/0:9,0:9:0.38:0,0,11	1/1:21,0:21:13.24:250,13,0	1/1:16,0:15:34.89:507,35,0	./.	1/1:11,1:13:9.09:321,9,0	1/1:6,0:6:5.48:54,5,0	0/1:8,0:8:0.92:1,0,2	0/0:4,0:3:0.47:0,0,1	1/1:18,0:17:13.88:243,14,0	0/1:18,0:18:2.77:154,0,3	1/1:5,0:5:8.39:115,8,0	0/1:7,0:7:6.98:110,0,7	1/1:6,0:6:2.90:68,3,0	1/1:7,0:7:5.57:185,6,0	1/1:12,0:12:10.67:127,11,0	0/1:18,0:18:8.55:65,0,9	./.	./.	0/1:3,0:3:0:0,0,0	0/1:10,0:9:18.20:100,0,18	1/1:17,0:17:8:230,8,0	1/1:12,2:14:4.71:171,5,0	1/1:1,0:1:3.01:53,3,0
chr10	75556050	.	GA	G	2257.65	PASS	AB=0.941;AC=17;AF=0.304;AN=56;BaseQRankSum=10.808;DP=527;FS=3.794;HRun=10;HaplotypeScore=54.3948;InbreedingCoeff=0.6724;MQ=74.83;MQ0=0;MQRankSum=0.097;QD=14.02;ReadPosRankSum=3.093;VQSLOD=3.7921;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.18:0,66,730	0/1:7,1:8:2:2,0,201	0/1:8,0:8:1.69:2,0,26	0/1:12,0:12:12.85:13,0,77	0/0:35,0:35:96.25:0,96,1055	0/0:24,0:24:63.17:0,63,695	0/1:11,1:12:1.99:2,0,208	0/0:23,0:23:39.99:0,40,434	1/1:2,16:18:44.99:391,45,0	0/0:27,0:27:63.16:0,63,690	0/0:12,1:14:7.34:0,7,287	1/1:1,19:20:59.99:520,60,0	1/1:3,17:20:50.99:443,51,0	0/0:13,0:13:36.08:0,36,388	0/0:20,0:20:54.14:0,54,590	0/1:15,2:17:3.98:4,0,411	0/0:25,0:26:75.04:0,75,810	0/0:21,1:21:48.10:0,48,513	0/0:26,1:28:47.20:0,47,712	0/0:17,0:17:42.10:0,42,456	0/0:21,0:21:51.09:0,51,544	1/1:1,13:14:38.99:339,39,0	1/1:0,16:16:44.99:391,45,0	1/1:2,14:16:38.99:339,39,0	0/0:18,0:18:51.13:0,51,558	0/0:24,0:24:66.18:0,66,730	0/0:26,0:26:68.54:0,69,726	0/0:4,0:4:12.03:0,12,133
chr10	75556546	.	GT	G	2235.48	PASS	AB=0.837;AC=25;AF=0.446;AN=56;BaseQRankSum=6.982;DP=528;FS=15.217;HRun=13;HaplotypeScore=59.3232;InbreedingCoeff=0.4282;MQ=75.19;MQ0=1;MQRankSum=0.703;QD=7.90;ReadPosRankSum=4.748;VQSLOD=0.8134;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,1:26:37.97:0,38,503	0/0:9,0:10:21.03:0,21,204	0/0:20,1:14:13.51:0,14,97	0/0:14,1:11:10.25:0,10,84	0/1:11,8:20:50.05:159,0,50	0/0:25,2:31:1.73:0,2,432	0/0:15,0:15:33.04:0,33,316	0/0:27,0:29:65.78:0,66,588	1/1:5,17:23:46.74:332,47,0	1/1:10,17:27:37.13:309,37,0	1/1:8,14:22:10.89:190,11,0	1/1:5,18:25:45.79:318,46,0	1/1:3,8:11:0.82:168,1,0	0/1:8,0:8:9.20:9,0,71	0/0:15,0:16:35.89:0,36,331	1/1:5,12:20:28.44:281,28,0	0/1:17,3:20:15.50:15,0,376	0/0:12,0:12:30.01:0,30,279	0/0:21,0:21:41.59:0,42,386	0/0:22,2:24:0.48:0,0,296	0/1:8,1:9:6.85:7,0,97	1/1:4,9:14:22.85:159,23,0	1/1:2,11:13:2.21:150,2,0	1/1:1,10:12:28.88:203,29,0	0/1:5,10:15:4.40:110,0,4	0/1:20,3:24:11.39:11,0,354	0/1:18,2:20:1.78:2,0,292	0/0:24,1:25:32.14:0,32,459
chr10	75563685	.	AG	A	2512.71	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.022;DP=582;FS=5.092;HRun=9;HaplotypeScore=65.7596;InbreedingCoeff=0.9707;MQ=70.90;MQ0=1;MQRankSum=-1.683;QD=20.10;ReadPosRankSum=2.484;VQSLOD=4.3109;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:25:48.84:0,49,248	0/0:13,0:12:39.08:0,39,422	0/0:10,0:9:4.89:0,5,108	0/0:13,0:12:23.78:0,24,216	0/0:35,0:35:93.20:0,93,1015	0/0:24,0:24:60.12:0,60,654	0/0:21,0:21:60.07:0,60,621	0/0:23,0:26:51.09:0,51,563	1/1:2,19:21:42.02:384,42,0	0/0:21,0:21:45.13:0,45,514	0/0:31,0:31:81.18:0,81,902	1/1:1,19:20:42.02:384,42,0	1/1:1,15:16:41.98:376,42,0	0/0:19,0:19:54.05:0,54,617	0/0:13,0:13:36.08:0,36,397	0/0:15,0:15:39.12:0,39,451	0/0:23,0:23:60.14:0,60,666	0/0:17,0:17:39.11:0,39,449	0/0:15,0:15:36.02:0,36,399	0/0:34,0:34:87.25:0,87,996	0/0:17,0:17:42.12:0,42,486	1/1:1,23:24:68.87:605,69,0	1/1:5,23:28:62.97:567,63,0	1/1:1,15:16:42.02:384,42,0	0/0:29,0:29:75.21:0,75,857	0/0:28,0:28:75.19:0,75,841	0/0:22,0:22:60.04:0,60,670	0/0:6,0:6:15:0,15,149
chr10	75565461	.	ATAC	A	53.45	PASS	AB=0.820;AC=5;AF=0.089;AN=56;BaseQRankSum=5.586;DP=853;FS=3.860;HRun=0;HaplotypeScore=139.3163;InbreedingCoeff=0.1809;MQ=58.04;MQ0=20;MQRankSum=-4.283;QD=0.85;ReadPosRankSum=-3.715;VQSLOD=1.6170;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,141,3178	0/0:10,0:10:30.10:0,30,706	0/0:35,1:8:21.85:0,22,427	0/0:57,0:19:38.54:0,39,545	0/0:29,0:29:87.28:0,87,2049	0/0:22,0:21:63.06:0,63,1431	0/0:56,0:56:99:0,162,3670	0/0:28,0:27:81.26:0,81,1834	0/1:12,6:14:58.88:59,0,134	0/0:44,0:41:99:0,117,2824	0/0:14,0:14:42.14:0,42,983	0/1:10,4:13:66.45:66,0,77	0/1:14,0:14:26.97:27,0,73	0/0:45,0:44:99:0,117,2724	0/0:48,0:47:99:0,132,3160	0/0:37,0:37:99:0,102,2403	0/0:37,1:37:99:0,105,2520	0/0:33,0:32:71.32:0,71,2130	0/0:19,0:16:45.15:0,45,1043	0/0:22,0:22:60.21:0,60,1413	0/0:111,2:110:99:0,304,7298	0/1:3,2:4:0:0,0,0	0/0:4,0:4:5.93:0,6,92	0/1:10,2:8:0:0,0,0	0/0:17,0:17:51.13:0,51,1169	0/0:38,0:38:99:0,102,2671	0/0:23,0:23:69.24:0,69,1630	0/0:5,0:5:15.05:0,15,369
chr10	75565469	.	CTCACA	C	77.46	PASS	AB=0.766;AC=6;AF=0.107;AN=56;BaseQRankSum=4.943;DP=830;FS=0.000;HRun=0;HaplotypeScore=161.6820;InbreedingCoeff=0.3338;MQ=58.26;MQ0=25;MQRankSum=-2.474;QD=1.58;ReadPosRankSum=-2.990;VQSLOD=2.0759;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,132,3960	0/0:11,0:11:33.11:0,33,1000	0/0:33,0:9:1.13:0,1,442	0/0:50,0:21:22.69:0,23,459	0/0:28,0:28:84.29:0,84,2720	0/0:20,0:19:57.20:0,57,1537	0/0:54,0:54:99:0,151,4293	0/0:29,0:28:84.23:0,84,2246	0/1:13,4:13:99:110,0,100	0/0:45,0:43:99:0,129,3473	0/0:13,0:13:36.12:0,36,1154	0/1:8,4:10:22.78:23,0,58	0/0:6,0:4:1.82:0,2,5	0/0:46,0:45:99:0,117,3505	0/0:45,0:44:99:0,123,3600	0/0:32,0:32:87.27:0,87,2402	0/0:43,0:42:99:0,120,3714	0/0:31,0:30:90.31:0,90,2920	0/0:20,0:17:48.15:0,48,1240	0/0:23,0:23:66.23:0,66,1947	0/0:113,0:109:99:0,298,8666	1/1:7,2:5:3.01:45,3,0	0/0:3,0:2:3.01:0,3,48	1/1:7,2:8:1.78:5,2,0	0/0:18,0:18:54.18:0,54,1552	0/0:39,0:39:99:0,108,3035	0/0:20,0:20:60.21:0,60,1787	0/0:6,0:6:18.06:0,18,538
chr10	75565474	.	A	ACAC	363.27	PASS	AB=0.889;AC=7;AF=0.125;AN=56;BaseQRankSum=5.122;DP=842;FS=0.000;HRun=0;HaplotypeScore=142.8702;InbreedingCoeff=0.6468;MQ=58.15;MQ0=23;MQRankSum=-2.158;QD=6.99;ReadPosRankSum=-3.343;VQSLOD=2.3311;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,126,2020	0/0:12,0:12:36.10:0,36,548	0/0:41,0:12:29.12:0,29,362	0/0:50,0:20:4.70:0,5,286	0/0:29,0:29:87.28:0,87,1386	0/0:18,0:18:54.17:0,54,802	0/0:51,0:51:99:0,138,2147	0/0:30,0:29:81.25:0,81,1230	0/1:21,2:18:1.84:266,0,2	0/0:42,0:41:99:0,108,1659	0/0:12,0:12:36.12:0,36,576	1/1:12,2:10:5.99:132,6,0	0/0:7,0:4:1.82:0,2,6	0/0:46,0:45:99:0,114,1800	0/0:43,0:42:99:0,120,1892	0/0:30,0:30:69.23:0,69,1100	0/0:43,0:42:99:0,120,1916	0/0:32,0:31:90.31:0,90,1461	0/0:19,0:18:48.12:0,48,690	0/0:24,0:24:66.21:0,66,1038	0/0:115,0:111:99:0,289,4437	1/1:6,3:5:2.92:45,3,0	1/1:4,0:4:3.01:40,3,0	0/0:8,2:9:1.78:0,2,6	0/0:19,0:19:54.18:0,54,839	0/0:39,0:39:99:0,111,1650	0/0:21,0:21:63.21:0,63,977	0/0:6,0:6:18.06:0,18,288
chr10	75565567	.	C	CT	539.13	PASS	AB=0.814;AC=6;AF=0.107;AN=56;BaseQRankSum=8.234;DP=1012;FS=2.656;HRun=0;HaplotypeScore=156.0137;InbreedingCoeff=-0.1158;MQ=46.02;MQ0=124;MQRankSum=-6.961;QD=2.67;ReadPosRankSum=-3.884;VQSLOD=2.6991;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:38:93.21:0,93,1240	0/0:12,0:10:27.06:0,27,358	0/0:47,0:2:6.02:0,6,74	0/0:63,0:5:5.59:0,6,45	0/0:29,0:22:60.19:0,60,819	0/0:39,0:38:91.80:0,92,1374	0/0:50,0:43:99:0,117,1527	0/0:23,0:6:18.03:0,18,192	0/1:31,12:29:99:107,0,524	0/0:43,0:34:78.55:0,79,1236	0/0:25,0:21:54.16:0,54,735	0/1:28,12:26:99:279,0,258	0/1:20,9:20:99:172,0,212	0/0:47,0:46:99:0,120,1631	0/0:32,0:31:87.29:0,87,1216	0/0:29,0:26:69.01:0,69,912	0/0:21,0:20:57.19:0,57,792	0/0:23,0:21:54.11:0,54,754	0/0:27,0:14:42.14:0,42,587	0/0:28,0:21:60.20:0,60,838	0/0:140,3:134:99:0,326,4462	0/1:27,0:23:9.33:9,0,192	0/1:15,6:17:52:52,0,148	0/1:31,11:33:14.40:42,0,14	0/0:21,0:19:54.02:0,54,738	0/0:34,0:26:69.22:0,69,948	0/0:19,0:17:51.16:0,51,697	0/0:9,0:9:27.09:0,27,377
chr10	75565582	.	C	CT	445.61	PASS	AB=0.779;AC=7;AF=0.125;AN=56;BaseQRankSum=7.920;DP=981;FS=0.000;HRun=0;HaplotypeScore=165.6792;InbreedingCoeff=0.0447;MQ=46.78;MQ0=81;MQRankSum=-7.059;QD=2.52;ReadPosRankSum=-2.702;VQSLOD=2.2449;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:36:93.30:0,93,1282	0/0:12,0:11:30.09:0,30,403	0/0:61,0:3:9.02:0,9,113	0/0:78,0:7:9.90:0,10,111	0/0:23,0:20:51.16:0,51,697	0/0:37,0:36:48.26:0,48,1197	0/0:50,1:45:99:0,126,1705	0/0:23,0:15:42.11:0,42,539	0/1:26,8:25:99:121,0,446	0/0:31,0:29:75.25:0,75,1048	0/0:23,0:21:51.17:0,51,701	0/1:20,11:22:99:206,0,162	0/1:18,8:22:99:142,0,249	0/0:39,0:39:99:0,102,1381	0/0:36,0:35:92.98:0,93,1164	0/0:28,0:26:64.77:0,65,884	0/0:24,0:23:64.08:0,64,865	0/0:21,0:21:49.58:0,50,677	0/0:31,0:19:51.13:0,51,675	0/0:24,0:20:54.18:0,54,755	0/0:136,2:132:99:0,294,4245	0/1:18,6:22:34.32:42,0,34	1/1:9,6:14:0.67:23,1,0	0/1:34,11:36:31.90:37,0,32	0/0:20,0:19:51.16:0,51,697	0/0:30,0:26:75.24:0,75,1033	0/0:19,0:19:54.17:0,54,737	0/0:13,0:13:36.12:0,36,503
chr10	75565589	.	C	CT	287.42	PASS	AB=0.927;AC=8;AF=0.143;AN=56;BaseQRankSum=8.195;DP=959;FS=5.938;HRun=0;HaplotypeScore=164.3348;InbreedingCoeff=0.0512;MQ=46.47;MQ0=85;MQRankSum=-6.502;QD=1.36;ReadPosRankSum=-3.318;VQSLOD=1.6863;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,2:37:5.48:5,0,1039	0/0:11,0:10:30.07:0,30,395	0/0:66,0:3:9.03:0,9,125	0/0:82,0:8:14.89:0,15,125	0/0:19,0:16:48.16:0,48,670	0/0:31,0:30:43.92:0,44,906	0/0:48,0:42:99:0,115,1590	0/0:24,0:18:54.18:0,54,752	0/1:32,2:28:99:117,0,274	0/0:29,0:27:72.23:0,72,990	0/0:20,0:18:51.17:0,51,707	0/1:27,2:20:63.30:193,0,63	0/1:26,2:22:28.89:29,0,289	0/0:38,0:38:99:0,102,1396	0/0:34,0:32:87.22:0,87,1215	0/0:27,0:25:67.75:0,68,893	0/0:26,0:25:67.08:0,67,898	0/0:22,0:22:36.59:0,37,636	0/0:28,0:19:54.18:0,54,751	0/0:21,0:18:54.18:0,54,755	0/0:139,0:132:99:0,308,4211	0/1:21,2:20:6.03:6,0,15	1/1:12,0:13:2.21:26,2,0	0/1:35,5:33:37.45:37,0,49	0/0:19,0:18:45.14:0,45,612	0/0:31,0:28:75.19:0,75,981	0/0:18,0:17:48.16:0,48,671	0/0:14,0:14:36.09:0,36,469
chr10	75565604	.	CATCACACT	C	481.71	PASS	AB=0.893;AC=8;AF=0.143;AN=56;BaseQRankSum=9.259;DP=939;FS=2.247;HRun=0;HaplotypeScore=237.0882;InbreedingCoeff=0.2918;MQ=46.84;MQ0=49;MQRankSum=-8.557;QD=3.30;ReadPosRankSum=-4.433;VQSLOD=1.9847;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:74.34:0,74,2915	0/0:11,0:11:32.46:0,32,812	0/0:80,0:3:3.01:0,3,71	0/0:96,0:13:6.22:0,6,348	0/0:18,0:17:51.17:0,51,1670	0/0:24,0:23:62.77:0,63,2130	0/0:47,0:46:97.26:0,97,4118	0/0:32,0:30:81.11:0,81,2874	0/1:22,4:24:99:360,0,187	0/0:30,0:30:87.28:0,87,3091	0/0:18,0:18:49.40:0,49,1577	0/1:25,1:22:56.46:56,0,258	0/1:23,1:19:99:107,0,354	0/0:38,0:38:95.90:0,96,3043	0/0:36,0:35:99:0,99,3518	0/0:24,0:24:61.10:0,61,2158	0/0:25,0:24:49.17:0,49,2522	0/0:22,0:22:47.74:0,48,1918	0/0:23,0:20:54.15:0,54,1598	0/0:15,0:16:45.15:0,45,1576	0/0:138,0:136:99:0,251,11217	1/1:18,2:18:2.03:22,2,0	1/1:11,0:10:5.75:42,6,0	0/1:31,2:28:5.97:25,0,6	0/0:12,0:12:25.25:0,25,1043	0/0:29,0:29:79.53:0,80,2829	0/0:18,0:18:54.19:0,54,1829	0/0:14,0:14:42.14:0,42,1429
chr10	75565612	.	TCA	T	238.09	PASS	AB=0.888;AC=10;AF=0.179;AN=56;BaseQRankSum=10.728;DP=980;FS=4.510;HRun=0;HaplotypeScore=167.0085;InbreedingCoeff=0.7370;MQ=47.61;MQ0=56;MQRankSum=-9.285;QD=1.62;ReadPosRankSum=1.946;VQSLOD=2.5452;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:40:40.39:0,40,1088	0/0:11,0:11:18.01:0,18,261	0/0:90,0:4:3.01:0,3,41	0/0:108,1:14:14.76:0,15,160	0/0:21,0:20:33.11:0,33,518	0/0:28,0:27:48.15:0,48,738	0/0:47,2:48:22.32:0,22,1281	0/0:37,0:33:9.84:0,10,766	1/1:23,0:24:13.53:111,14,0	0/0:31,1:31:38.21:0,38,1015	0/0:15,0:15:24.08:0,24,389	1/1:24,0:21:28.25:129,28,0	1/1:21,0:20:24.90:113,25,0	0/0:40,0:40:66.17:0,66,1004	0/0:34,1:34:31.59:0,32,1075	0/0:22,0:22:9.34:0,9,719	0/0:26,0:25:65.56:0,66,1031	0/0:22,0:22:41.52:0,42,745	0/0:22,1:17:3.19:0,3,321	0/0:19,0:19:33.07:0,33,478	0/0:132,4:133:99:0,173,3599	0/1:18,0:18:6.83:8,0,7	0/1:11,0:12:0.03:0,0,0	1/1:32,0:28:5.34:28,5,0	0/0:14,0:13:27.09:0,27,433	0/0:29,0:29:35.44:0,35,940	0/0:17,0:17:39.13:0,39,626	0/0:14,0:14:24.08:0,24,381
chr10	75565619	.	CACA	C	923.97	PASS	AB=0.920;AC=8;AF=0.143;AN=56;BaseQRankSum=10.565;DP=996;FS=3.785;HRun=0;HaplotypeScore=179.0289;InbreedingCoeff=0.3431;MQ=45.37;MQ0=64;MQRankSum=-10.164;QD=5.44;ReadPosRankSum=2.466;VQSLOD=2.9312;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,2:39:31.46:0,31,1840	0/0:12,0:12:33.11:0,33,626	0/0:93,0:2:6.01:0,6,101	0/0:107,0:11:14.28:0,14,335	0/0:21,0:20:51.14:0,51,1036	0/0:26,0:25:63.16:0,63,1327	0/0:45,0:44:99:0,114,2413	0/0:43,0:37:84.46:0,84,1745	0/1:32,3:28:54.98:303,0,55	0/0:30,0:29:83.95:0,84,1847	0/0:11,0:11:27.09:0,27,639	1/1:30,2:26:14.67:294,15,0	0/1:29,1:23:47.94:293,0,48	0/0:34,1:35:84.12:0,84,1787	0/0:33,0:32:60.10:0,60,1971	0/0:21,0:22:23.59:0,24,1257	0/0:27,0:26:74.93:0,75,1725	0/0:25,0:25:63:0,63,1365	0/0:21,0:16:40.51:0,41,744	0/0:17,0:17:42.14:0,42,906	0/0:146,0:143:99:0,317,6705	0/1:20,2:19:19:47,0,19	0/1:12,2:12:28.27:34,0,28	1/1:26,5:27:5.10:91,5,0	0/0:15,0:14:36.12:0,36,790	0/0:28,0:28:78.10:0,78,1725	0/0:16,0:16:48.13:0,48,1049	0/0:12,0:12:33.07:0,33,698
chr10	75565620	.	ACAC	A	1105.49	PASS	AB=0.783;AC=8;AF=0.143;AN=56;BaseQRankSum=10.541;DP=988;FS=8.430;HRun=0;HaplotypeScore=176.0146;InbreedingCoeff=0.2481;MQ=45.25;MQ0=66;MQRankSum=-10.379;QD=6.54;ReadPosRankSum=2.358;VQSLOD=2.1647;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:37:54.36:0,54,1863	0/0:12,0:12:33.11:0,33,627	0/0:94,1:2:5.93:0,6,90	0/0:105,0:10:22.37:0,22,329	0/0:20,0:19:48.16:0,48,1013	0/0:25,0:24:57.19:0,57,1282	0/0:45,0:44:99:0,114,2429	0/0:43,0:37:88.08:0,88,1758	0/1:30,6:28:43.74:301,0,44	0/0:30,0:29:83.95:0,84,1847	0/0:10,0:10:27.09:0,27,639	1/1:18,14:26:0.81:408,1,0	0/1:18,10:22:66.98:395,0,67	0/0:34,0:34:78.27:0,78,1741	0/0:33,0:32:41.96:0,42,1954	0/0:22,0:22:37.28:0,37,1248	0/0:27,0:26:67.79:0,68,1707	0/0:26,0:26:60.99:0,61,1370	0/0:20,0:15:39.12:0,39,759	0/0:17,0:17:42.14:0,42,906	0/0:144,0:142:99:0,313,6655	0/1:13,9:19:28.82:30,0,29	0/1:11,3:12:11.13:11,0,56	1/1:27,7:26:4.67:88,5,0	0/0:15,0:14:36.10:0,36,775	0/0:27,0:27:78.10:0,78,1727	0/0:15,0:15:42.14:0,42,1008	0/0:12,0:12:30.10:0,30,685
chr10	75565634	.	ACAC	A	757.68	PASS	AB=0.801;AC=4;AF=0.071;AN=56;BaseQRankSum=8.405;DP=1023;FS=22.158;HRun=0;HaplotypeScore=182.2039;InbreedingCoeff=-0.0852;MQ=44.44;MQ0=98;MQRankSum=-8.125;QD=4.95;ReadPosRankSum=0.899;VQSLOD=1.4835;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:34:78.09:0,78,1555	0/0:13,0:12:34:0,34,680	0/0:79,0:2:6:0,6,70	0/0:102,1:9:12.42:0,12,177	0/0:18,0:15:36.12:0,36,781	0/0:23,0:22:49.32:0,49,933	0/0:44,0:41:99:0,102,2179	0/0:42,0:33:86.29:0,86,1537	0/1:37,7:33:99:177,0,383	0/0:35,0:28:81.28:0,81,1714	0/0:14,0:12:33.11:0,33,695	0/1:24,14:28:33.17:322,0,33	0/1:22,10:24:99:329,0,164	0/0:33,0:31:75.26:0,75,1613	0/0:33,0:32:96.33:0,96,2014	0/0:22,0:21:54.19:0,54,1179	0/0:33,0:32:54.17:0,54,1666	0/0:28,0:28:24.04:0,24,1327	0/0:21,0:12:31.28:0,31,539	0/0:15,0:13:30.10:0,30,653	0/0:145,0:141:99:0,291,6112	0/0:21,9:24:10.38:0,10,178	0/0:16,5:15:12.04:0,12,247	0/1:32,7:29:39.87:40,0,100	0/0:21,0:19:45.15:0,45,915	0/0:33,0:32:82.50:0,83,1582	0/0:15,0:14:39.13:0,39,859	0/0:10,0:10:30.10:0,30,658
chr10	75565678	.	A	ACACT	2264.55	PASS	AB=0.905;AC=12;AF=0.214;AN=56;BaseQRankSum=5.583;DP=939;FS=17.336;HRun=0;HaplotypeScore=183.6846;InbreedingCoeff=0.3336;MQ=45.28;MQ0=98;MQRankSum=-5.241;QD=7.35;ReadPosRankSum=-0.593;VQSLOD=1.7016;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,10:26:14.99:900,0,15	0/0:11,0:9:20.53:0,21,329	0/0:66,0:2:2.97:0,3,21	0/1:94,0:7:5.53:6,0,103	0/0:24,0:22:51.16:0,51,916	0/0:17,0:15:36.02:0,36,577	0/0:44,0:40:92.74:0,93,1597	0/0:45,0:32:78.21:0,78,1311	0/1:32,2:26:65.10:449,0,65	0/0:43,0:33:84.26:0,84,1474	0/0:18,0:15:29.57:0,30,375	1/1:25,1:21:23.29:410,23,0	1/1:21,3:17:13.42:347,13,0	0/0:27,0:26:57.11:0,57,999	0/0:31,0:29:75.18:0,75,1335	0/0:28,1:24:60.17:0,60,1040	0/0:38,0:37:89.15:0,89,1569	0/1:25,1:26:99:117,0,896	0/0:27,0:14:38.98:0,39,650	0/0:10,0:10:21.05:0,21,366	0/0:119,0:115:99:0,263,4631	0/1:24,4:23:11.07:96,0,11	1/1:8,0:8:5.97:46,6,0	0/1:35,3:26:54.46:54,0,64	0/0:27,0:25:56.74:0,57,942	0/0:29,0:24:66.15:0,66,1095	0/0:17,0:17:42.10:0,42,728	0/0:9,0:8:24.01:0,24,338
chr10	75565681	.	CACA	C	693.22	PASS	AB=0.772;AC=5;AF=0.089;AN=56;BaseQRankSum=8.812;DP=965;FS=5.658;HRun=0;HaplotypeScore=165.0439;InbreedingCoeff=0.2868;MQ=44.92;MQ0=105;MQRankSum=-8.050;QD=5.29;ReadPosRankSum=-1.735;VQSLOD=2.2363;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,2:25:29.15:0,29,510	0/0:10,0:8:21.02:0,21,415	0/0:70,0:2:3:0,3,29	0/0:97,0:7:6.81:0,7,121	0/0:23,0:21:54.17:0,54,1208	0/0:18,0:16:39.03:0,39,741	0/0:45,0:40:99:0,105,2227	0/0:44,0:31:84.27:0,84,1798	0/1:23,13:29:99:303,0,168	0/0:46,0:34:93.30:0,93,1900	0/0:16,0:13:29.63:0,30,507	1/1:23,9:27:24.30:301,24,0	0/1:18,6:19:86.13:86,0,127	0/0:30,0:29:72.16:0,72,1507	0/0:33,0:31:78.20:0,78,1756	0/0:30,0:25:67.10:0,67,1458	0/0:36,0:35:75.24:0,75,2043	0/0:28,0:28:14.71:0,15,1327	0/0:27,0:15:42.10:0,42,788	0/0:11,0:11:21.07:0,21,515	0/0:119,0:115:99:0,278,6114	0/0:24,7:26:9.79:0,10,108	0/0:6,2:8:1.47:0,1,5	0/1:28,11:26:99:125,0,160	0/0:25,0:23:36.37:0,36,1263	0/0:32,0:27:78.26:0,78,1602	0/0:15,0:15:42.12:0,42,958	0/0:9,0:8:24.01:0,24,437
chr10	75566624	.	GC	G	2932.44	PASS	AB=0.956;AC=15;AF=0.268;AN=56;BaseQRankSum=6.588;DP=522;FS=0.396;HRun=10;HaplotypeScore=60.6444;InbreedingCoeff=0.7070;MQ=81.28;MQ0=1;MQRankSum=-0.199;QD=14.59;ReadPosRankSum=4.754;VQSLOD=3.8242;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:15:8.59:0,9,44	0/0:8,0:9:23.88:0,24,235	0/1:23,1:24:37.30:37,0,211	0/1:17,0:14:2.38:2,0,111	0/0:21,1:22:19.01:0,19,403	0/0:15,0:15:27.06:0,27,290	0/0:19,0:19:48.10:0,48,513	0/0:17,0:17:24.88:0,25,236	1/1:3,20:23:56.99:495,57,0	0/0:12,0:12:15.04:0,15,166	0/0:13,0:13:20.90:0,21,231	1/1:2,21:24:62.01:527,62,0	1/1:5,15:20:41.98:364,42,0	0/0:29,1:30:69.02:0,69,680	0/0:19,0:22:44.93:0,45,464	0/1:9,1:10:2.20:2,0,189	0/0:14,1:16:6.10:0,6,325	0/0:14,0:14:42.07:0,42,438	0/0:15,1:16:4.01:0,4,264	0/0:14,2:16:16.02:0,16,379	0/0:26,0:29:56.81:0,57,585	1/1:3,16:19:44.98:391,45,0	1/1:4,16:20:41.98:365,42,0	1/1:6,38:44:99:935,108,0	0/0:7,0:7:5.71:0,6,66	0/0:23,1:25:10.01:0,10,316	0/0:14,0:14:42.08:0,42,440	0/0:9,0:9:24.02:0,24,245
chr10	75566771	.	TA	T	2866.89	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=12.170;DP=601;FS=2.185;HRun=10;HaplotypeScore=56.6275;InbreedingCoeff=0.9268;MQ=64.01;MQ0=0;MQRankSum=-0.308;QD=18.74;ReadPosRankSum=3.601;VQSLOD=4.4664;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:63.17:0,63,697	0/0:14,0:14:36.09:0,36,391	0/0:8,0:7:18.04:0,18,194	0/1:5,0:4:3.11:3,0,28	0/0:25,0:25:72.08:0,72,768	0/0:18,1:19:22.06:0,22,462	0/0:31,0:31:84.14:0,84,895	0/0:31,0:31:78.11:0,78,837	1/1:1,21:22:62.99:547,63,0	0/0:33,0:33:87.20:0,87,950	0/0:16,1:17:22.07:0,22,463	1/1:2,23:25:53.98:469,54,0	1/1:2,22:24:53.98:469,54,0	0/0:24,0:24:69.18:0,69,756	0/0:26,0:26:63.16:0,63,690	0/0:19,0:19:57.15:0,57,631	0/0:25,0:25:69.15:0,69,744	0/0:22,0:22:66.12:0,66,700	0/0:19,0:19:45.08:0,45,470	0/0:23,1:24:36.97:0,37,600	0/0:11,0:11:33.09:0,33,365	1/1:5,19:24:23.71:421,24,0	1/1:1,20:21:59.98:521,60,0	1/1:2,30:32:71.98:625,72,0	0/0:18,0:18:42.11:0,42,465	0/0:27,0:27:69.12:0,69,748	0/0:23,0:23:60.11:0,60,641	0/0:6,0:6:18.05:0,18,199
chr10	75568428	.	CG	C	715.52	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=7.879;DP=540;FS=1.924;HRun=3;HaplotypeScore=91.2969;InbreedingCoeff=0.8433;MQ=68.26;MQ0=21;MQRankSum=-4.521;QD=5.59;ReadPosRankSum=1.843;VQSLOD=0.6996;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:5.77:6,0,47	0/0:4,0:4:8.86:0,9,62	0/0:42,0:10:12.03:0,12,121	0/0:56,0:22:20.20:0,20,203	0/0:23,0:23:35.94:0,36,337	0/0:14,1:15:12.30:0,12,239	0/0:9,0:8:12:0,12,109	0/0:34,0:33:66.12:0,66,557	1/1:15,0:13:35.41:275,35,0	0/0:19,0:19:50.92:0,51,460	0/0:17,0:16:32.93:0,33,289	1/1:12,0:10:8.22:57,8,0	1/1:15,1:15:8.54:76,9,0	0/0:12,0:11:17.37:0,17,149	0/0:12,0:11:23.51:0,24,203	0/0:11,0:9:17.99:0,18,164	0/0:24,0:23:50.15:0,50,395	0/0:16,0:16:32.52:0,33,267	0/0:20,0:19:33.38:0,33,338	0/0:15,0:15:29.97:0,30,230	0/0:22,0:22:50.92:0,51,438	1/1:16,1:17:38.26:254,38,0	1/1:17,0:17:18.05:178,18,0	1/1:19,1:19:8.30:48,8,0	0/0:20,0:20:42.93:0,43,431	0/0:15,0:14:20.19:0,20,185	0/0:13,0:13:27.45:0,27,252	0/0:13,0:10:25.19:0,25,197
chr10	75568430	.	GGTTTTTTTTTTTTTTTT	G	3139.69	PASS	AB=0.546;AC=10;AF=0.179;AN=56;BaseQRankSum=7.612;DP=561;FS=1.232;HRun=0;HaplotypeScore=203.3949;InbreedingCoeff=0.7928;MQ=65.29;MQ0=29;MQRankSum=-2.416;QD=32.04;ReadPosRankSum=5.176;VQSLOD=2.0480;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:18.06:0,18,472	0/0:6,0:6:18.03:0,18,547	0/0:43,0:10:23.06:0,23,367	0/0:55,0:21:38.06:0,38,362	0/0:27,0:27:69.18:0,69,2553	0/0:13,0:13:33.04:0,33,982	0/0:8,0:7:21.03:0,21,561	0/0:36,0:34:95.01:0,95,1629	1/1:9,1:13:35.96:722,36,0	0/0:23,0:21:62.98:0,63,1284	0/0:20,0:19:57.08:0,57,1566	1/1:2,9:11:7.15:233,7,0	0/1:3,12:15:3.51:298,0,4	0/0:11,0:10:26.37:0,26,430	0/0:13,0:12:29.93:0,30,619	0/0:9,0:7:18:0,18,342	0/0:22,0:21:60.02:0,60,1959	0/0:17,0:17:48:0,48,1465	0/0:22,0:19:56.53:0,57,1131	0/0:18,0:17:51.05:0,51,1416	0/0:23,0:23:68.99:0,69,1344	1/1:3,12:16:38.70:806,39,0	1/1:2,14:18:24.54:969,25,0	0/1:3,15:18:6.88:275,0,7	0/0:24,0:23:60.10:0,60,2414	0/0:14,0:13:38.29:0,38,913	0/0:14,0:14:39.05:0,39,1216	0/0:15,0:11:30.03:0,30,719
chr10	75568431	.	G	GGTT	38.70	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=5.516;DP=608;FS=1.594;HRun=0;HaplotypeScore=143.3246;InbreedingCoeff=0.1566;MQ=60.61;MQ0=45;MQRankSum=-5.843;QD=0.55;ReadPosRankSum=-6.290;VQSLOD=0.5260;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:6,22:28:0.81:112,1,0	0/0:6,0:6:6.85:0,7,71	0/0:42,0:9:7.01:0,7,93	0/0:54,0:19:12:0,12,144	0/0:30,0:30:13.43:0,13,210	0/0:13,0:13:27.34:0,27,195	0/0:9,0:8:13.54:0,14,102	0/0:39,0:37:7.14:0,7,402	0/0:14,0:12:31.94:0,32,205	0/0:24,0:21:40.05:0,40,376	0/1:22,0:21:8.56:9,0,241	0/0:13,0:11:3.73:0,4,31	0/0:16,0:15:10.68:0,11,76	0/0:10,0:9:15.74:0,16,136	0/0:14,0:13:25.55:0,26,194	0/0:12,0:10:17.55:0,18,146	0/0:22,0:21:34.58:0,35,269	0/0:23,0:23:12.21:0,12,256	0/0:32,0:22:22.13:0,22,336	0/1:18,0:16:0.43:0,0,194	0/0:23,0:21:25.56:0,26,325	0/0:16,0:16:34.94:0,35,203	0/0:18,0:18:20.31:0,20,144	0/0:21,0:18:1.80:0,2,11	0/0:24,0:23:38.57:0,39,287	0/0:19,0:17:1.08:0,1,142	0/0:14,0:14:23.59:0,24,216	0/0:28,0:17:9.95:0,10,138
chr10	75576227	.	T	TGAGAGAGAGAGA	1217.74	PASS	AB=1.000;AC=17;AF=0.340;AN=50;BaseQRankSum=4.080;DP=481;FS=41.871;HRun=0;HaplotypeScore=153.3282;InbreedingCoeff=0.3936;MQ=48.19;MQ0=19;MQRankSum=-1.272;QD=5.64;ReadPosRankSum=-2.815;VQSLOD=0.4591;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:19:3.99:286,0,4	0/0:10,0:10:21.07:0,21,567	0/0:3,0:2:3.01:0,3,69	./.	0/0:16,0:16:9.03:0,9,307	0/0:19,0:20:22.77:0,23,612	0/0:17,0:14:18.05:0,18,382	0/0:21,0:14:11.47:0,11,197	1/1:22,0:22:3.48:112,3,0	0/0:14,0:14:18.06:0,18,593	0/0:19,0:18:17.79:0,18,591	1/1:19,0:18:11.37:313,11,0	1/1:18,0:16:9.03:276,9,0	0/0:11,0:10:15.05:0,15,484	0/0:25,0:25:30.08:0,30,923	0/0:13,0:12:9:0,9,305	0/1:23,0:22:41.77:42,0,767	0/1:15,0:15:54.69:55,0,544	0/1:14,0:11:14.94:63,0,15	1/1:20,0:19:12.89:132,13,0	0/0:27,0:25:12.13:0,12,937	1/1:26,0:26:0.43:1,0,0	1/1:21,0:19:3.01:80,3,0	./.	0/0:24,0:24:23.82:0,24,651	0/0:22,0:20:17.25:0,17,710	0/1:18,0:18:16.78:17,0,309	./.
chr10	75576247	.	A	AGAGAGAGAGG	1010.58	PASS	AB=0.926;AC=13;AF=0.232;AN=56;BaseQRankSum=4.502;DP=529;FS=8.323;HRun=0;HaplotypeScore=147.5458;InbreedingCoeff=0.3848;MQ=55.21;MQ0=12;MQRankSum=1.353;QD=5.38;ReadPosRankSum=-0.712;VQSLOD=1.8730;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:19:48.81:193,0,49	0/0:12,0:12:36.04:0,36,695	0/0:11,0:6:5.18:0,5,143	0/0:17,0:7:10.71:0,11,107	0/0:16,0:16:26.81:0,27,432	0/0:17,0:17:31.32:0,31,673	0/0:18,0:16:30.02:0,30,527	0/0:21,0:18:44.86:0,45,530	0/1:9,0:22:6.58:149,0,7	0/0:21,0:21:47.84:0,48,806	0/0:21,0:21:50.95:0,51,815	1/1:18,0:17:19.13:476,19,0	0/1:21,0:19:1.76:171,0,2	0/0:10,0:9:26.98:0,27,547	0/0:18,0:18:45.03:0,45,1018	0/0:14,0:13:10.37:0,10,425	0/1:25,0:24:9.28:9,0,990	0/0:17,0:17:38.19:0,38,686	0/0:16,0:15:10.85:0,11,206	0/1:20,0:20:51.06:51,0,123	0/0:31,0:29:54.11:0,54,1095	1/1:7,0:23:0.43:1,0,0	1/1:5,14:22:5.92:39,6,0	1/1:15,0:16:1.98:69,2,0	0/0:26,0:26:63.02:0,63,957	0/0:22,0:20:50.50:0,51,869	0/0:29,0:29:68.37:0,68,724	0/0:4,0:3:2.98:0,3,21
chr10	75576308	.	GT	G	195.04	PASS	AB=0.906;AC=4;AF=0.071;AN=56;BaseQRankSum=5.070;DP=576;FS=0.886;HRun=10;HaplotypeScore=68.7867;InbreedingCoeff=0.5378;MQ=65.82;MQ0=2;MQRankSum=1.384;QD=4.33;ReadPosRankSum=-0.698;VQSLOD=0.3870;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,13:18:32.97:286,33,0	0/0:12,0:12:30.08:0,30,332	0/1:20,1:19:0.93:1,0,163	0/0:19,0:17:35.86:0,36,342	0/0:19,1:20:19.07:0,19,439	0/0:24,0:24:63.15:0,63,686	0/0:27,0:27:72.19:0,72,796	0/0:36,0:36:81.66:0,82,879	0/0:30,0:30:63.17:0,63,697	0/0:17,0:17:42.11:0,42,465	0/0:20,1:21:34.08:0,34,589	0/0:23,0:23:57.08:0,57,598	0/0:23,0:22:57.14:0,57,623	0/0:16,0:16:48.13:0,48,531	0/0:21,0:21:57.14:0,57,623	0/0:28,0:28:61.37:0,61,766	0/0:21,0:22:56.99:0,57,611	0/0:13,0:13:30.08:0,30,332	0/0:21,1:23:33.96:0,34,586	0/0:28,0:28:78.16:0,78,842	0/0:19,0:21:47.80:0,48,493	0/0:9,0:9:15.04:0,15,166	0/0:21,0:21:42.11:0,42,465	0/0:11,0:11:27.03:0,27,285	0/0:21,0:21:48.13:0,48,531	0/0:17,0:17:45.11:0,45,489	0/0:27,0:28:78.03:0,78,836	0/1:5,1:6:10.94:11,0,118
chr10	75577471	.	CA	C	1484.30	PASS	AB=0.769;AC=13;AF=0.232;AN=56;BaseQRankSum=8.685;DP=474;FS=3.719;HRun=10;HaplotypeScore=52.1708;InbreedingCoeff=0.7466;MQ=80.44;MQ0=0;MQRankSum=0.225;QD=14.27;ReadPosRankSum=3.928;VQSLOD=3.7237;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:77.90:0,78,803	0/1:7,1:8:5.01:5,0,169	0/0:22,1:21:6.28:0,6,234	0/0:14,0:14:20.51:0,21,203	0/0:23,0:23:60.13:0,60,638	0/0:17,2:20:4.87:0,5,483	0/0:15,0:15:39.11:0,39,431	0/0:31,0:31:49.11:0,49,735	1/1:1,15:16:41.99:364,42,0	0/0:14,0:14:36.09:0,36,393	0/0:8,0:8:24.06:0,24,258	1/1:3,16:19:38.99:338,39,0	0/1:2,11:13:0.19:227,0,0	0/0:17,0:17:42.11:0,42,457	0/0:14,0:14:36.06:0,36,384	0/0:15,0:15:39.11:0,39,431	0/0:22,0:22:60.12:0,60,643	0/0:18,0:18:45.08:0,45,475	0/0:25,0:25:66.18:0,66,730	0/0:28,1:29:46.12:0,46,719	0/0:6,0:6:18.03:0,18,190	1/1:1,10:11:17.97:156,18,0	1/1:3,12:15:11.59:252,12,0	1/1:1,14:15:35.99:312,36,0	0/0:14,0:14:42.09:0,42,454	0/0:17,0:17:45.08:0,45,479	0/0:14,1:16:21.91:0,22,436	0/1:6,1:7:4.99:5,0,178
chr10	75578122	.	G	GGGT	6409.25	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-10.198;DP=504;FS=0.410;HRun=0;HaplotypeScore=73.8848;InbreedingCoeff=0.9892;MQ=86.36;MQ0=0;MQRankSum=-3.004;QD=48.55;ReadPosRankSum=5.299;VQSLOD=6.8760;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:19:33.98:678,34,0	0/0:4,0:4:12.03:0,12,179	0/0:32,0:32:87.24:0,87,1317	0/0:13,0:13:38.97:0,39,537	0/0:15,0:15:45.07:0,45,683	0/0:13,0:13:33.09:0,33,509	0/0:21,0:21:57.10:0,57,859	0/0:32,0:32:87.25:0,87,1338	1/1:1,15:16:36.12:780,36,0	0/0:13,0:13:33.10:0,33,515	0/0:11,0:11:33.09:0,33,512	1/1:0,29:29:78.27:1691,78,0	1/1:3,17:20:57.20:1234,57,0	0/0:11,0:11:15.12:0,15,469	0/0:23,0:23:69.18:0,69,1128	0/0:20,0:20:60.16:0,60,986	0/0:26,0:26:72.16:0,72,1092	0/0:6,0:6:18.05:0,18,281	0/0:28,0:28:75.11:0,75,1162	0/0:15,0:15:45.12:0,45,737	0/0:21,0:21:60.21:0,60,1017	1/1:0,10:10:24.08:520,24,0	1/1:4,11:17:36.01:753,36,0	1/1:4,16:20:36.11:752,36,0	0/0:10,0:10:27.08:0,27,409	0/0:24,0:24:60.20:0,60,999	0/0:21,0:21:57.07:0,57,881	0/0:13,0:13:30.08:0,30,482
chr10	75578399	.	A	ATT	2809.39	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-5.811;DP=529;FS=0.462;HRun=10;HaplotypeScore=64.8537;InbreedingCoeff=0.9805;MQ=69.79;MQ0=0;MQRankSum=-0.727;QD=28.38;ReadPosRankSum=-0.010;VQSLOD=3.6508;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:51:99:0,117,1240	0/0:7,0:7:18.01:0,18,176	0/0:10,0:10:20.90:0,21,182	0/0:5,0:6:8.07:0,8,48	0/0:17,0:19:41.52:0,42,390	0/0:22,0:24:38.75:0,39,449	0/0:24,0:26:65.83:0,66,652	0/0:29,0:29:59.99:0,60,598	1/1:2,10:13:27.08:386,27,0	0/0:16,0:16:30.01:0,30,305	0/0:13,0:13:27.02:0,27,274	1/1:1,14:16:36.08:496,36,0	1/1:2,16:21:45.13:618,45,0	0/0:13,0:13:20.96:0,21,207	0/0:18,0:18:51.09:0,51,511	0/0:9,0:9:27.06:0,27,275	0/0:27,0:31:62.39:0,62,689	0/0:25,0:27:71.51:0,72,673	0/0:24,0:27:41.47:0,41,521	0/0:24,0:24:54.05:0,54,548	0/0:13,0:13:27.04:0,27,274	1/1:1,12:14:27.09:384,27,0	1/1:1,11:12:27.09:396,27,0	1/1:3,20:23:48.16:716,48,0	0/0:19,0:20:50.82:0,51,500	0/0:21,0:21:42.04:0,42,424	0/0:14,0:15:23.75:0,24,290	0/0:11,0:11:27.02:0,27,275
chr10	75579554	.	AG	A	6694.34	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=18.400;DP=752;FS=0.662;HRun=1;HaplotypeScore=84.9372;InbreedingCoeff=1.0000;MQ=86.19;MQ0=0;MQRankSum=-2.232;QD=38.47;ReadPosRankSum=3.421;VQSLOD=5.4304;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,147,2296	0/0:13,0:13:39.13:0,39,623	0/0:23,0:22:65.67:0,66,966	0/0:27,0:27:81.12:0,81,1230	0/0:27,0:27:81.25:0,81,1269	0/0:22,0:22:66.14:0,66,978	0/0:24,0:24:72.25:0,72,1147	0/0:33,0:33:99:0,99,1516	1/1:0,33:33:90.30:1259,90,0	0/0:33,0:33:93.18:0,93,1433	0/0:17,0:17:51.17:0,51,815	1/1:1,28:29:84.27:1146,84,0	1/1:0,27:27:72.24:1007,72,0	0/0:27,0:27:81.26:0,81,1271	0/0:30,0:30:90.27:0,90,1390	0/0:23,0:23:69.24:0,69,1103	0/0:36,0:36:99:0,105,1624	0/0:26,0:26:78.23:0,78,1194	0/0:23,0:23:69.22:0,69,1060	0/0:34,0:34:99:0,102,1607	0/0:35,0:35:99:0,105,1673	1/1:0,30:30:84.27:1174,84,0	1/1:2,23:25:72.22:977,72,0	1/1:0,30:30:81.27:1132,81,0	0/0:13,0:13:39.13:0,39,623	0/0:26,0:26:75.24:0,75,1171	0/0:21,0:21:63.21:0,63,999	0/0:16,0:16:45.13:0,45,693
chr10	75580341	.	CCA	C	2974.52	PASS	AB=0.820;AC=15;AF=0.268;AN=56;BaseQRankSum=9.495;DP=558;FS=10.133;HRun=0;HaplotypeScore=71.7221;InbreedingCoeff=0.6910;MQ=65.99;MQ0=8;MQRankSum=2.634;QD=17.29;ReadPosRankSum=4.687;VQSLOD=2.9141;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:2,20:21:3.50:471,0,4	0/0:7,0:7:12.04:0,12,195	0/0:40,0:17:15.74:0,16,392	0/0:32,0:19:32.12:0,32,459	0/0:14,0:14:4.55:0,5,457	0/1:13,1:15:30.75:31,0,532	0/0:28,0:28:69.22:0,69,1088	0/0:15,0:15:30.09:0,30,454	1/1:5,8:13:21.07:259,21,0	0/0:12,0:12:21.86:0,22,333	0/0:12,0:12:24.05:0,24,350	1/1:8,18:26:57.18:702,57,0	1/1:2,19:20:45.01:554,45,0	0/0:25,0:25:69.19:0,69,1049	0/0:27,0:27:69.24:0,69,1125	0/0:16,1:17:2.65:0,3,527	0/0:37,0:37:90.29:0,90,1422	0/0:20,0:19:45.15:0,45,724	0/0:10,0:9:12.03:0,12,173	0/0:16,0:16:42.09:0,42,599	0/0:35,3:37:4.38:0,4,1060	1/1:2,11:13:25.33:329,25,0	1/1:2,7:9:15.05:185,15,0	1/1:8,19:26:51.16:628,51,0	0/0:15,0:15:33.11:0,33,533	0/0:15,0:14:38.06:0,38,509	0/1:26,0:26:4.64:5,0,928	0/0:6,0:6:15.05:0,15,231
chr10	75582308	.	TGA	T	1157.51	PASS	AB=0.970;AC=3;AF=0.054;AN=56;BaseQRankSum=6.842;DP=768;FS=11.654;HRun=0;HaplotypeScore=129.3203;InbreedingCoeff=0.6466;MQ=56.69;MQ0=3;MQRankSum=1.314;QD=14.84;ReadPosRankSum=1.479;VQSLOD=2.8479;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,44:46:86.96:1246,87,0	0/0:16,0:16:48.15:0,48,822	0/0:14,0:10:23.17:0,23,313	0/1:30,1:10:16.88:17,0,217	0/0:20,0:20:51.16:0,51,866	0/0:17,0:17:48.16:0,48,876	0/0:29,0:29:77.48:0,77,1373	0/0:40,0:38:99:0,102,1760	0/0:17,0:15:27.07:0,27,494	0/0:41,0:41:99:0,111,1985	0/0:22,0:22:66.20:0,66,1167	0/0:18,0:17:27.56:0,28,468	0/0:25,0:25:54.18:0,54,951	0/0:31,0:31:90.31:0,90,1617	0/0:41,0:41:99:0,123,2120	0/0:32,0:32:93.29:0,93,1621	0/0:28,0:28:71.38:0,71,1273	0/0:24,0:24:61.93:0,62,1016	0/0:20,0:20:57.16:0,57,999	0/0:26,0:25:72.20:0,72,1267	0/0:51,0:51:90.32:0,90,2249	0/0:26,0:26:48.05:0,48,737	0/0:24,0:22:38.92:0,39,714	0/0:29,0:23:17.89:0,18,329	0/0:28,0:27:72.21:0,72,1228	0/0:28,0:28:81.28:0,81,1458	0/0:31,0:31:84.26:0,84,1433	0/0:12,0:12:33.02:0,33,499
chr10	75582334	.	T	TG	753.78	PASS	AB=0.842;AC=10;AF=0.179;AN=56;BaseQRankSum=7.789;DP=692;FS=18.893;HRun=1;HaplotypeScore=102.1633;InbreedingCoeff=0.7217;MQ=57.27;MQ0=5;MQRankSum=-4.333;QD=9.19;ReadPosRankSum=-1.141;VQSLOD=-0.2127;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:78.24:0,78,1010	0/0:11,0:11:33.11:0,33,427	0/0:15,0:6:18.04:0,18,205	0/0:27,0:9:8.96:0,9,96	0/0:15,0:14:42.14:0,42,544	0/0:16,0:16:48.14:0,48,609	0/0:35,0:35:74.31:0,74,1110	0/0:38,0:38:99:0,102,1320	1/1:9,2:9:17.99:180,18,0	0/0:40,0:40:99:0,117,1477	0/0:24,0:24:66.21:0,66,853	0/1:6,3:8:26.11:70,0,26	0/1:13,1:14:11.83:210,0,12	0/0:35,0:35:99:0,102,1306	0/0:47,0:47:99:0,135,1702	0/0:35,0:35:99:0,102,1309	0/0:26,0:26:73.93:0,74,888	0/0:24,0:24:65.92:0,66,784	0/0:22,0:20:57.17:0,57,717	0/0:25,0:25:72.23:0,72,930	0/0:50,1:51:99:0,108,1684	1/1:8,2:10:8.69:83,9,0	1/1:11,6:15:23.93:235,24,0	1/1:13,8:15:11.41:138,11,0	0/0:23,0:21:57.18:0,57,737	0/0:23,0:23:69.22:0,69,887	0/0:29,0:29:81.26:0,81,1050	0/0:8,0:8:17.99:0,18,199
chr10	75582335	.	GA	G	802.89	PASS	AB=0.591;AC=10;AF=0.179;AN=56;BaseQRankSum=7.945;DP=692;FS=14.547;HRun=1;HaplotypeScore=100.5441;InbreedingCoeff=0.7245;MQ=57.18;MQ0=5;MQRankSum=-5.017;QD=10.04;ReadPosRankSum=-1.688;VQSLOD=0.0086;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:81.25:0,81,1243	0/0:11,0:11:33.11:0,33,526	0/0:16,0:6:18.04:0,18,257	0/0:28,0:10:17.48:0,17,172	0/0:15,0:14:42.14:0,42,657	0/0:17,0:17:51.15:0,51,762	0/0:35,0:35:79.65:0,80,1404	0/0:39,0:39:99:0,108,1647	1/1:4,4:9:18:217,18,0	0/0:40,0:40:99:0,120,1823	0/0:23,0:23:66.22:0,66,1031	0/1:4,5:8:25.84:79,0,26	0/1:2,7:14:17.96:231,0,18	0/0:35,0:35:99:0,102,1589	0/0:46,0:46:99:0,138,2080	0/0:34,0:34:99:0,102,1605	0/0:26,0:26:77.18:0,77,1081	0/0:24,0:24:65.24:0,65,949	0/0:22,0:20:57.18:0,57,830	0/0:25,0:25:72.24:0,72,1121	0/0:51,0:51:99:0,126,2164	1/1:3,0:9:8.46:71,8,0	1/1:7,5:14:23.74:254,24,0	1/1:15,5:15:11.36:113,11,0	0/0:23,0:21:60.20:0,60,932	0/0:23,0:23:69.23:0,69,1088	0/0:29,0:29:87.30:0,87,1372	0/0:8,0:8:20.82:0,21,268
chr10	75582338	.	A	AGT	643.66	PASS	AB=0.929;AC=11;AF=0.196;AN=56;BaseQRankSum=9.069;DP=685;FS=10.341;HRun=0;HaplotypeScore=112.4558;InbreedingCoeff=0.7957;MQ=57.20;MQ0=5;MQRankSum=-6.929;QD=8.94;ReadPosRankSum=-0.343;VQSLOD=2.5255;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:81.16:0,81,1101	0/0:11,0:11:33.04:0,33,435	0/0:18,0:8:24.06:0,24,330	0/0:30,0:12:17.45:0,17,174	0/0:14,0:13:39.12:0,39,574	0/0:16,0:16:48.15:0,48,713	0/0:36,0:36:95.60:0,96,1321	0/0:40,0:40:99:0,105,1476	1/1:7,2:7:8.35:70,8,0	0/0:39,0:39:99:0,111,1600	0/0:25,0:25:72.18:0,72,1011	1/1:5,2:6:11.11:126,11,0	0/1:12,1:13:23.36:164,0,23	0/0:34,0:34:99:0,99,1424	0/0:44,0:44:99:0,123,1792	0/0:34,0:34:99:0,102,1516	0/0:26,0:26:55.19:0,55,950	0/0:25,0:25:49.89:0,50,842	0/0:21,0:19:50.86:0,51,618	0/0:26,0:26:69.20:0,69,1008	0/0:53,1:54:99:0,105,2002	1/1:7,2:9:8.76:119,9,0	1/1:11,5:14:18.02:244,18,0	1/1:12,6:12:2.84:80,3,0	0/0:20,0:19:54.16:0,54,785	0/0:23,0:23:69.21:0,69,1032	0/0:29,0:29:87.22:0,87,1218	0/0:7,0:7:14.24:0,14,207
chr10	75582346	.	AGT	A	73.77	PASS	AB=0.765;AC=7;AF=0.125;AN=56;BaseQRankSum=6.492;DP=655;FS=0.000;HRun=0;HaplotypeScore=106.6390;InbreedingCoeff=0.4248;MQ=57.25;MQ0=4;MQRankSum=-4.824;QD=1.80;ReadPosRankSum=-3.132;VQSLOD=1.2397;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:75.24:0,75,1411	0/0:9,0:9:24.08:0,24,445	0/0:18,0:8:24.06:0,24,381	0/0:31,0:12:11.85:0,12,349	0/0:16,0:15:45.15:0,45,851	0/0:17,0:17:51.17:0,51,984	0/0:34,0:34:77.03:0,77,1576	0/0:41,0:40:99:0,108,1974	0/1:5,2:5:8.15:16,0,8	0/0:39,0:39:99:0,117,2193	0/0:22,0:22:60.18:0,60,1119	1/1:5,0:5:2.20:48,2,0	0/1:4,5:9:44.57:45,0,77	0/0:33,0:33:96.27:0,96,1794	0/0:44,0:44:99:0,129,2447	0/0:35,0:35:99:0,102,1871	0/0:22,0:22:53.58:0,54,1084	0/0:25,0:25:62.88:0,63,1164	0/0:17,0:15:39.13:0,39,736	0/0:23,0:23:66.21:0,66,1211	0/0:51,0:51:99:0,123,2549	0/1:6,1:7:2.09:2,0,4	1/1:10,3:13:2.63:77,3,0	0/0:14,1:11:2.50:0,2,7	0/0:21,0:20:54.18:0,54,1019	0/0:25,0:25:72.19:0,72,1348	0/0:29,0:29:87.30:0,87,1612	0/0:7,0:7:15.38:0,15,334
chr10	75582421	.	GAGAGAA	G	107.91	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=5.031;DP=776;FS=15.388;HRun=0;HaplotypeScore=163.6610;InbreedingCoeff=0.6169;MQ=65.38;MQ0=6;MQRankSum=-0.453;QD=6.74;ReadPosRankSum=-2.425;VQSLOD=0.9555;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:81.70:0,82,2569	0/0:16,0:16:48.14:0,48,1595	0/0:31,0:13:22.59:0,23,463	0/0:34,0:17:2.67:0,3,310	0/0:32,0:32:90.31:0,90,3075	0/0:22,0:22:63.20:0,63,2122	0/0:38,0:38:99:0,108,3495	0/0:29,0:27:75.25:0,75,2466	1/1:2,2:4:6.02:142,6,0	0/0:51,0:51:99:0,148,5050	0/0:29,0:29:81.28:0,81,2778	0/1:4,0:4:0:0,0,0	1/1:8,0:8:5.69:65,6,0	0/0:32,0:32:90.27:0,90,2898	0/0:42,0:42:99:0,126,4094	0/0:47,0:47:99:0,138,4562	0/0:26,0:26:78.27:0,78,2411	0/0:31,0:31:87.30:0,87,2833	0/0:22,0:22:60.68:0,61,1915	0/0:40,0:40:99:0,114,3856	0/0:64,0:63:99:0,178,5793	0/0:3,0:3:3.01:0,3,106	0/0:2,0:2:2.60:0,3,10	0/0:9,3:9:2.98:0,3,13	0/0:24,0:24:66.23:0,66,2250	0/0:47,0:47:99:0,141,4948	0/0:40,0:40:99:0,120,4171	0/0:14,0:14:42.14:0,42,1439
chr10	75582424	.	A	AGT	58.82	PASS	AB=0.686;AC=6;AF=0.107;AN=56;BaseQRankSum=4.149;DP=776;FS=7.203;HRun=0;HaplotypeScore=109.8876;InbreedingCoeff=0.6887;MQ=66.56;MQ0=6;MQRankSum=-2.768;QD=2.10;ReadPosRankSum=-0.959;VQSLOD=1.6197;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:83.25:0,83,1186	0/0:16,0:16:45.14:0,45,667	0/0:28,0:11:21.43:0,21,240	0/0:36,0:20:7.39:0,7,166	0/0:31,0:31:90.26:0,90,1311	0/0:21,0:21:60.20:0,60,918	0/0:36,0:36:99:0,105,1537	0/0:29,0:27:81.20:0,81,1139	1/1:5,0:5:6.02:89,6,0	0/0:50,0:50:99:0,150,2232	0/0:28,0:28:84.24:0,84,1218	0/0:4,1:5:0:0,0,0	1/1:4,5:9:5.53:68,6,0	0/0:33,0:33:93.27:0,93,1355	0/0:44,0:44:99:0,123,1782	0/0:46,0:46:99:0,135,1943	0/0:26,0:26:78.15:0,78,1095	0/0:30,0:30:90.21:0,90,1293	0/0:21,0:21:60.20:0,60,893	0/0:40,0:40:99:0,114,1719	0/0:63,0:62:99:0,169,2539	0/0:2,1:3:3.01:0,3,46	0/1:1,1:2:0:0,0,0	0/1:7,5:9:0.12:0,0,0	0/0:24,0:24:69.20:0,69,997	0/0:49,0:49:99:0,144,2146	0/0:40,0:40:99:0,120,1770	0/0:14,0:14:42.11:0,42,599
chr10	75582491	.	T	TGAGA	2856.09	PASS	AB=0.625;AC=9;AF=0.161;AN=56;BaseQRankSum=10.144;DP=869;FS=8.591;HRun=0;HaplotypeScore=195.0573;InbreedingCoeff=0.7652;MQ=54.75;MQ0=7;MQRankSum=-10.851;QD=19.70;ReadPosRankSum=0.481;VQSLOD=2.1554;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:75.16:0,75,1250	0/0:15,0:15:36.05:0,36,498	0/0:19,0:6:12.04:0,12,194	0/0:25,0:12:14.90:0,15,182	0/0:47,0:47:99:0,117,1960	0/0:16,0:16:39.09:0,39,602	0/0:21,0:21:54.17:0,54,928	0/0:29,0:27:63.18:0,63,1013	1/1:9,25:34:39.03:805,39,0	0/0:57,0:57:99:0,150,2463	0/0:21,0:21:54.16:0,54,911	1/1:9,19:28:32.21:739,32,0	1/1:15,17:32:68.78:1387,69,0	0/0:46,0:46:99:0,123,2089	0/0:52,0:52:99:0,144,2376	0/0:39,0:39:99:0,108,1880	0/0:25,0:26:66.03:0,66,1088	0/0:25,0:25:21.53:0,22,850	0/0:21,0:17:45.12:0,45,724	0/0:36,0:36:80.90:0,81,1307	0/0:63,0:63:99:0,165,2696	0/1:5,8:12:49.31:71,0,49	0/1:3,7:9:0.01:0,0,0	0/1:14,14:20:0.38:0,0,0	0/0:30,0:30:88.13:0,88,1444	0/0:50,0:50:99:0,126,2074	0/0:34,0:34:87.23:0,87,1443	0/0:18,0:18:36.11:0,36,603
chr10	75582501	.	A	AGAGT	570.35	PASS	AB=0.979;AC=6;AF=0.107;AN=56;BaseQRankSum=10.359;DP=854;FS=5.860;HRun=0;HaplotypeScore=204.3881;InbreedingCoeff=0.4261;MQ=53.17;MQ0=7;MQRankSum=-10.229;QD=4.53;ReadPosRankSum=2.045;VQSLOD=2.2587;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:87.25:0,87,1546	0/0:13,0:13:36.11:0,36,635	0/0:13,0:4:12.04:0,12,215	0/0:14,0:6:5.98:0,6,77	0/0:46,0:46:99:0,126,2190	0/0:17,0:17:48.11:0,48,820	0/0:19,0:19:54.17:0,54,979	0/0:33,0:30:81.22:0,81,1382	0/1:35,1:36:8.46:139,0,8	0/0:50,0:50:99:0,138,2412	0/0:22,0:22:60.21:0,60,1088	1/1:28,2:30:29.37:242,29,0	0/1:32,2:34:27.22:302,0,27	0/0:46,0:46:99:0,129,2319	0/0:52,0:52:99:0,153,2755	0/0:43,0:43:99:0,129,2203	0/0:27,0:27:41.21:0,41,1176	0/0:25,0:25:33.32:0,33,885	0/0:25,0:19:54.18:0,54,944	0/0:29,0:29:84.28:0,84,1488	0/0:59,0:59:99:0,163,2945	0/1:14,0:13:1.74:2,0,45	0/1:12,0:11:0:0,0,0	0/0:25,4:21:0.94:0,1,2	0/0:32,0:32:94.18:0,94,1651	0/0:46,0:46:99:0,126,2192	0/0:31,0:31:90.29:0,90,1615	0/0:18,0:18:51.17:0,51,912
chr10	75582519	.	TGA	T	55.14	PASS	AB=0.960;AC=8;AF=0.143;AN=56;BaseQRankSum=8.304;DP=823;FS=3.067;HRun=0;HaplotypeScore=161.3292;InbreedingCoeff=0.1883;MQ=53.03;MQ0=5;MQRankSum=-8.003;QD=0.34;ReadPosRankSum=1.656;VQSLOD=2.7812;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:90.33:0,90,1566	0/0:10,0:10:30.10:0,30,550	0/0:6,1:2:5.99:0,6,76	0/0:9,0:2:3.01:0,3,55	0/0:37,0:37:99:0,108,1945	0/0:19,0:19:30.50:0,30,872	0/0:21,1:22:60.18:0,60,1003	0/0:34,0:31:90.25:0,90,1536	0/1:35,1:36:3.99:4,0,13	0/0:53,0:53:99:0,156,2669	0/0:21,0:21:60.12:0,60,1003	0/1:26,2:28:21.97:22,0,39	0/1:27,2:29:71.70:72,0,78	0/0:45,0:45:99:0,135,2308	0/0:50,0:50:99:0,141,2425	0/0:38,0:38:99:0,111,1980	0/0:25,1:26:20.41:0,20,1082	0/1:21,2:23:57.98:58,0,782	0/0:25,0:20:60.19:0,60,1052	0/0:33,0:33:99:0,99,1725	0/0:65,0:65:99:0,181,3140	0/1:10,0:10:0:0,0,0	0/1:10,0:9:0:0,0,0	1/1:23,4:21:0.85:2,1,0	0/0:30,0:30:76.13:0,76,1337	0/0:47,0:47:99:0,138,2356	0/0:30,0:30:84.26:0,84,1451	0/0:21,0:21:57.20:0,57,1034
chr10	75582521	.	AGAGT	A	1258.18	PASS	AB=0.738;AC=9;AF=0.161;AN=56;BaseQRankSum=10.465;DP=835;FS=3.793;HRun=0;HaplotypeScore=187.9776;InbreedingCoeff=0.6773;MQ=53.13;MQ0=4;MQRankSum=-10.363;QD=9.18;ReadPosRankSum=0.956;VQSLOD=2.9532;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:40:88.18:0,88,1993	0/0:10,0:10:30.10:0,30,728	0/0:8,0:2:3.01:0,3,39	0/0:9,0:2:3.01:0,3,42	0/0:37,0:37:99:0,99,2474	0/0:19,0:20:50.83:0,51,1250	0/0:23,0:23:54.18:0,54,1209	0/0:33,0:31:78.26:0,78,1733	1/1:10,25:35:26.95:400,27,0	0/0:57,0:57:99:0,147,3250	0/0:20,0:20:54.18:0,54,1290	1/1:14,14:28:26.12:350,26,0	1/1:10,20:30:47.25:640,47,0	0/0:46,0:46:99:0,120,2811	0/0:47,0:47:99:0,123,3005	0/0:38,0:38:99:0,111,2748	0/0:25,0:25:7.25:0,7,1400	0/1:24,0:24:10.06:10,0,999	0/0:24,0:21:57.15:0,57,1252	0/0:35,0:35:99:0,102,2363	0/0:66,0:67:99:0,178,4264	0/1:3,7:10:0:0,0,0	0/1:4,6:9:0.16:0,0,0	0/0:15,12:21:1.07:0,1,3	0/0:31,0:31:76.14:0,76,1581	0/0:49,0:49:99:0,126,2853	0/0:31,0:31:84.27:0,84,1789	0/0:21,0:21:57.19:0,57,1408
chr10	75582523	.	AGT	A	101.45	PASS	AB=0.981;AC=8;AF=0.143;AN=56;BaseQRankSum=9.897;DP=829;FS=4.457;HRun=0;HaplotypeScore=158.7684;InbreedingCoeff=0.3657;MQ=53.27;MQ0=4;MQRankSum=-9.798;QD=0.69;ReadPosRankSum=1.829;VQSLOD=2.0422;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:93.31:0,93,1696	0/0:10,0:10:30.10:0,30,578	0/0:7,1:2:3.01:0,3,58	0/0:10,0:2:3.01:0,3,58	0/0:39,0:39:99:0,114,2052	0/0:19,0:19:30.51:0,31,927	0/0:25,0:25:66.05:0,66,1108	0/0:33,0:32:90.16:0,90,1599	1/1:32,0:32:4.92:32,5,0	0/0:57,0:57:99:0,159,2844	0/0:20,0:20:57.18:0,57,1042	0/1:28,0:28:5.11:26,0,5	0/1:29,0:29:19.75:97,0,20	0/0:45,0:45:99:0,129,2385	0/0:48,0:48:99:0,132,2404	0/0:38,0:38:99:0,111,2108	0/0:24,0:24:16.41:0,16,1139	0/1:22,2:24:57.06:57,0,808	0/0:24,0:21:60.18:0,60,1113	0/0:36,0:36:99:0,108,1932	0/0:65,0:65:99:0,184,3335	0/1:9,0:9:0.04:0,0,0	0/0:9,1:9:0.17:0,0,0	1/1:22,3:19:0.58:2,1,0	0/0:30,0:30:75.88:0,76,1413	0/0:48,0:48:99:0,135,2500	0/0:32,0:32:90.23:0,90,1552	0/0:21,0:21:60.63:0,61,1098
chr10	75582527	.	AGT	A	281.56	PASS	AB=0.970;AC=10;AF=0.179;AN=56;BaseQRankSum=10.179;DP=801;FS=5.391;HRun=0;HaplotypeScore=153.7755;InbreedingCoeff=0.5577;MQ=53.28;MQ0=4;MQRankSum=-10.234;QD=1.69;ReadPosRankSum=1.506;VQSLOD=2.4491;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:96.26:0,96,1633	0/0:11,0:11:33.11:0,33,606	0/0:7,0:1:2.98:0,3,22	0/0:8,0:1:3:0,3,26	0/0:39,0:39:99:0,108,2011	0/0:18,0:18:53.91:0,54,963	0/0:23,0:23:63.07:0,63,1133	0/0:30,0:29:78.24:0,78,1422	1/1:29,1:30:4.89:33,5,0	0/0:55,0:55:99:0,153,2737	0/0:21,0:21:63.11:0,63,1130	1/1:24,1:26:18.11:118,18,0	1/1:28,1:29:10.15:203,10,0	0/0:45,0:45:99:0,132,2376	0/0:45,0:45:99:0,129,2401	0/0:37,0:37:99:0,111,2099	0/1:22,1:23:10:10,0,1043	0/1:22,2:24:54.01:54,0,823	0/0:22,0:19:57.15:0,57,998	0/0:37,0:37:99:0,108,2004	0/0:62,0:62:99:0,181,3379	0/1:8,0:8:0.04:0,0,0	0/0:9,1:9:0.17:0,0,0	0/1:27,0:21:0.08:0,0,1	0/0:30,0:30:78.88:0,79,1381	0/0:43,0:43:99:0,129,2318	0/0:31,0:31:90.18:0,90,1546	0/0:21,0:21:60.68:0,61,1135
chr10	75582539	.	TGA	T	242.34	PASS	AB=0.930;AC=9;AF=0.173;AN=52;BaseQRankSum=7.477;DP=784;FS=16.858;HRun=0;HaplotypeScore=167.9882;InbreedingCoeff=0.4382;MQ=53.21;MQ0=7;MQRankSum=-2.609;QD=1.73;ReadPosRankSum=-4.407;VQSLOD=-0.1355;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:78.30:0,78,1293	0/0:12,0:12:33.09:0,33,529	./.	./.	0/0:40,0:38:96.31:0,96,1657	0/0:19,0:19:52.57:0,53,857	0/0:22,0:22:54.16:0,54,884	0/0:28,0:26:51.17:0,51,786	0/1:29,1:30:31.46:31,0,215	0/0:50,0:50:99:0,141,2352	0/0:23,0:23:63.18:0,63,1041	0/1:25,5:30:77:148,0,77	0/1:26,1:27:65.40:65,0,158	0/0:41,0:41:99:0,120,2066	0/0:41,0:40:99:0,111,1865	0/0:37,0:37:99:0,111,1873	0/0:30,0:30:69.71:0,70,1345	0/0:22,0:22:59.22:0,59,832	0/0:18,0:17:44.94:0,45,742	0/0:39,0:39:99:0,102,1713	0/0:67,0:67:99:0,181,3031	1/1:11,0:9:2.86:25,3,0	1/1:12,0:11:5.94:64,6,0	1/1:28,2:26:3.40:42,3,0	0/0:21,0:21:45.82:0,46,743	0/0:42,0:41:99:0,120,1974	0/0:30,0:30:81.20:0,81,1311	0/0:21,0:21:57.14:0,57,968
chr10	75582551	.	T	TGA	528.01	PASS	AB=0.762;AC=3;AF=0.058;AN=52;BaseQRankSum=7.460;DP=797;FS=5.846;HRun=0;HaplotypeScore=164.8997;InbreedingCoeff=-0.0696;MQ=53.22;MQ0=12;MQRankSum=-7.471;QD=5.93;ReadPosRankSum=0.762;VQSLOD=3.1056;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:63.36:0,63,811	0/0:13,0:13:30.10:0,30,399	./.	./.	0/0:41,0:39:90.25:0,90,1151	0/0:23,0:23:63.21:0,63,838	0/0:22,0:22:57.05:0,57,742	0/0:26,0:19:39.13:0,39,518	0/1:17,15:31:99:275,0,108	0/0:52,0:51:99:0,144,1873	0/0:23,0:23:57.19:0,57,755	0/1:24,6:29:14.12:14,0,213	0/1:19,8:27:81.42:336,0,81	0/0:44,0:44:99:0,123,1612	0/0:42,0:40:96.26:0,96,1214	0/0:38,0:38:93.29:0,93,1221	0/0:33,0:33:43.52:0,44,1010	0/0:22,1:23:11.59:0,12,638	0/0:18,0:18:51.12:0,51,659	0/0:38,0:38:99:0,99,1302	0/0:60,0:60:99:0,169,2218	0/0:16,1:15:17.91:0,18,186	0/0:13,3:16:14.80:0,15,178	0/0:27,3:26:3.50:0,4,72	0/0:20,0:20:35.85:0,36,473	0/0:43,0:42:99:0,108,1417	0/0:27,0:27:75.24:0,75,981	0/0:20,0:20:57.17:0,57,738
chr10	75582553	.	AGAGAGTGAGT	A	2850.62	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=4.877;DP=792;FS=8.279;HRun=0;HaplotypeScore=271.2158;InbreedingCoeff=0.9116;MQ=53.14;MQ0=13;MQRankSum=-3.831;QD=18.75;ReadPosRankSum=-3.436;VQSLOD=0.9881;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:63.55:0,64,1519	0/0:13,0:13:33.11:0,33,676	./.	./.	0/0:40,0:38:93.31:0,93,2372	0/0:23,0:23:63.21:0,63,1551	0/0:23,0:23:60.08:0,60,1473	0/0:26,0:19:42.14:0,42,625	1/1:28,3:30:30.01:575,30,0	0/0:51,0:50:99:0,144,4055	0/0:21,0:21:60.20:0,60,1587	1/1:27,2:28:18.29:653,18,0	1/1:22,6:28:46.87:1001,47,0	0/0:44,0:44:99:0,126,3212	0/0:41,0:39:99:0,99,2335	0/0:38,0:38:99:0,99,2635	0/0:33,0:33:49.44:0,49,2222	0/0:23,0:23:2.82:0,3,1187	0/0:18,0:17:51.15:0,51,1352	0/0:39,0:39:99:0,108,2947	0/0:59,0:59:99:0,169,4506	1/1:14,3:15:17.88:336,18,0	1/1:16,1:16:13.68:320,14,0	1/1:28,2:26:1.88:138,2,0	0/0:19,0:19:37:0,37,645	0/0:42,0:41:99:0,111,3104	0/0:28,0:28:78.26:0,78,2478	0/0:21,0:21:57.19:0,57,1605
chr10	75582563	.	T	TGA	1781.75	PASS	AB=0.740;AC=10;AF=0.192;AN=52;BaseQRankSum=5.672;DP=795;FS=11.906;HRun=0;HaplotypeScore=149.8118;InbreedingCoeff=0.7304;MQ=53.31;MQ0=21;MQRankSum=-1.657;QD=11.65;ReadPosRankSum=-1.526;VQSLOD=2.7745;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:51.07:0,51,675	0/0:15,0:15:30.10:0,30,399	./.	./.	0/0:40,0:38:87.24:0,87,1110	0/0:24,0:24:57.17:0,57,738	0/0:29,0:29:74.46:0,74,981	0/0:20,0:13:21.06:0,21,267	0/1:20,11:30:36.94:187,0,37	0/0:49,0:47:99:0,120,1597	0/0:23,0:23:66.20:0,66,860	1/1:13,12:24:20.76:508,21,0	0/1:17,9:26:14.19:429,0,14	0/0:48,0:48:99:0,117,1520	0/0:35,0:33:87.15:0,87,1117	0/0:34,0:34:99:0,99,1296	0/0:32,0:32:78.80:0,79,1086	0/0:25,0:25:16.29:0,16,602	0/0:23,0:18:50.90:0,51,639	0/0:41,0:41:99:0,117,1522	0/0:62,0:62:99:0,150,1945	1/1:13,6:17:27.08:433,27,0	1/1:11,9:18:14.54:259,15,0	1/1:22,10:29:8.58:126,9,0	0/0:17,0:16:33.11:0,33,439	0/0:45,0:44:99:0,114,1517	0/0:27,0:26:72.22:0,72,941	0/0:17,0:17:39.13:0,39,517
chr10	75582757	.	TGAGTGAGTGA	T	4668.66	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.380;DP=924;FS=2.361;HRun=0;HaplotypeScore=301.0734;InbreedingCoeff=0.9234;MQ=59.36;MQ0=6;MQRankSum=-7.428;QD=27.30;ReadPosRankSum=-1.227;VQSLOD=3.9010;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:99:0,126,4584	0/0:16,0:16:42.14:0,42,1564	0/0:19,0:10:14.88:0,15,397	0/0:30,0:7:3.79:0,4,132	0/0:37,0:37:99:0,99,3809	0/0:31,0:30:78.23:0,78,2983	0/0:40,0:40:92.58:0,93,3761	0/0:36,0:36:96.32:0,96,2547	1/1:9,27:35:45.15:1380,45,0	0/0:44,0:44:99:0,108,3987	0/0:27,0:27:75.26:0,75,2810	1/1:5,30:35:33.07:1005,33,0	1/1:8,27:35:38.82:1191,39,0	0/0:45,0:45:45.75:0,46,3840	0/0:49,0:49:99:0,129,4661	0/0:38,0:38:99:0,111,4637	0/0:31,0:31:87.21:0,87,3173	0/0:25,0:25:58.75:0,59,2004	0/0:21,0:19:48.16:0,48,1878	0/0:35,0:35:87.11:0,87,3127	0/0:53,0:52:99:0,123,4724	1/1:4,20:24:6.49:182,6,0	1/1:3,15:18:5.78:180,6,0	1/1:23,0:22:39.52:730,40,0	0/0:27,0:27:60.18:0,60,2184	0/0:49,0:48:99:0,129,4766	0/0:34,0:34:81.26:0,81,2976	0/0:16,0:16:42.14:0,42,1695
chr10	75582767	.	A	AGT	1427.63	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=10.256;DP=930;FS=5.421;HRun=0;HaplotypeScore=168.9092;InbreedingCoeff=0.8255;MQ=57.54;MQ0=7;MQRankSum=-7.202;QD=9.21;ReadPosRankSum=0.381;VQSLOD=3.3020;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:50:99:0,129,1945	0/0:16,0:16:48.14:0,48,693	0/0:17,0:8:23.30:0,23,291	0/0:38,0:11:20.32:0,20,224	0/0:41,0:41:99:0,123,1788	0/0:30,0:28:78.26:0,78,1189	0/0:36,0:36:99:0,103,1540	0/0:37,0:36:99:0,105,1581	1/1:31,0:31:17.43:450,17,0	0/0:46,0:45:99:0,132,1966	0/0:30,0:30:87.24:0,87,1282	1/1:32,0:32:13.43:314,13,0	1/1:31,0:31:12.54:230,13,0	0/0:42,0:42:99:0,113,1775	0/0:50,0:50:99:0,150,2241	0/0:42,0:42:99:0,126,1880	0/0:34,0:34:95.80:0,96,1407	0/0:23,0:23:32.05:0,32,872	0/0:24,0:20:60.20:0,60,911	0/0:34,0:34:99:0,99,1450	0/0:53,0:52:99:0,147,2133	1/1:20,0:20:6.01:106,6,0	0/1:17,0:17:15.46:100,0,15	1/1:19,5:23:6.27:391,6,0	0/0:23,0:23:66.68:0,67,985	0/0:54,0:53:99:0,153,2262	0/0:33,0:33:99:0,99,1466	0/0:20,0:20:60.20:0,60,906
chr10	75582769	.	AGT	A	901.23	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.090;DP=933;FS=0.508;HRun=0;HaplotypeScore=169.2019;InbreedingCoeff=0.9326;MQ=57.64;MQ0=8;MQRankSum=-7.400;QD=5.93;ReadPosRankSum=0.864;VQSLOD=3.3788;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:50:99:0,135,2478	0/0:16,0:16:48.16:0,48,909	0/0:18,0:9:16.57:0,17,301	0/0:37,0:11:16.75:0,17,233	0/0:41,0:41:99:0,120,2272	0/0:31,0:29:81.22:0,81,1458	0/0:35,0:35:99:0,102,1958	0/0:40,0:39:99:0,117,2085	1/1:30,0:30:22.58:280,23,0	0/0:46,0:45:99:0,135,2546	0/0:32,0:32:93.29:0,93,1667	1/1:31,0:31:9.62:183,10,0	1/1:31,0:31:37.30:252,37,0	0/0:42,1:43:74.72:0,75,2144	0/0:50,0:50:99:0,147,2717	0/0:42,0:42:99:0,123,2308	0/0:33,0:33:96.29:0,96,1803	0/0:23,0:23:58.08:0,58,1100	0/0:24,0:20:60.21:0,60,1127	0/0:35,0:35:99:0,102,1761	0/0:52,0:51:99:0,141,2576	1/1:20,0:20:5.85:48,6,0	1/1:16,0:16:5.52:27,6,0	1/1:19,5:23:13.44:283,13,0	0/0:25,0:25:72.19:0,72,1255	0/0:52,0:52:99:0,150,2773	0/0:33,0:33:93.30:0,93,1731	0/0:20,0:20:60.21:0,60,1154
chr10	75582901	.	TGA	T	115.96	PASS	AB=0.864;AC=8;AF=0.154;AN=52;BaseQRankSum=6.077;DP=793;FS=10.661;HRun=0;HaplotypeScore=125.5795;InbreedingCoeff=0.6029;MQ=54.77;MQ0=9;MQRankSum=-4.947;QD=1.29;ReadPosRankSum=-1.134;VQSLOD=1.0830;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:57.14:0,57,925	0/0:15,0:15:42.14:0,42,734	0/0:30,0:8:11.99:0,12,129	0/1:51,0:14:29.83:30,0,89	0/0:35,0:35:90.17:0,90,1493	0/0:26,0:26:69.20:0,69,1145	0/0:34,0:34:94.19:0,94,1599	0/0:55,0:53:99:0,141,2379	1/1:5,2:6:2.92:17,3,0	0/0:40,0:40:99:0,108,1822	0/0:33,0:33:96.27:0,96,1562	1/1:4,4:8:3.01:37,3,0	1/1:4,4:8:15:153,15,0	0/0:36,0:36:99:0,108,1765	0/0:41,0:41:99:0,121,2004	0/0:47,0:47:99:0,135,2225	0/0:22,0:22:57.15:0,57,959	0/0:20,0:20:27.61:0,28,616	0/0:24,0:23:66.21:0,66,1091	0/0:39,0:39:99:0,102,1716	0/0:46,0:45:99:0,120,1994	./.	./.	0/1:10,6:16:6.69:7,0,8	0/0:25,0:24:69.24:0,69,1207	0/0:46,0:46:99:0,120,2079	0/0:33,0:33:93.30:0,93,1565	0/0:15,0:15:36.12:0,36,604
chr10	75582911	.	AGT	A	66.62	PASS	AB=0.917;AC=11;AF=0.212;AN=52;BaseQRankSum=7.152;DP=736;FS=0.000;HRun=0;HaplotypeScore=111.9836;InbreedingCoeff=0.4696;MQ=55.26;MQ0=16;MQRankSum=-6.113;QD=0.65;ReadPosRankSum=-4.438;VQSLOD=0.5636;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,3:35:41.04:0,41,350	0/0:16,0:16:28.58:0,29,831	0/1:12,4:3:21.27:21,0,51	0/1:36,0:9:1.34:1,0,106	0/0:33,0:33:90.22:0,90,1648	0/0:26,0:26:63.10:0,63,1196	0/0:32,0:32:78.13:0,78,1698	0/0:48,0:45:99:0,129,2390	1/1:5,1:5:0.47:1,0,0	0/0:41,0:41:99:0,120,2238	0/0:30,0:30:84.26:0,84,1542	1/1:4,0:4:2.96:19,3,0	1/1:4,1:5:8.94:69,9,0	0/0:36,0:35:99:0,105,1961	0/0:40,0:40:66.64:0,67,2066	0/0:45,0:45:99:0,126,2230	0/0:25,0:25:63.19:0,63,1177	0/1:19,1:20:36.39:36,0,699	0/0:30,0:25:72.24:0,72,1339	0/0:35,0:35:96.15:0,96,1755	0/0:48,0:47:99:0,123,2238	./.	./.	1/1:7,7:14:0.16:44,0,0	0/0:22,1:22:66.23:0,66,1273	0/0:42,0:42:99:0,123,2263	0/0:30,0:30:90.29:0,90,1579	0/0:12,0:12:36.11:0,36,661
chr10	75582913	.	T	TGA	637.75	PASS	AB=1.000;AC=6;AF=0.120;AN=50;BaseQRankSum=3.103;DP=718;FS=1.802;HRun=0;HaplotypeScore=109.1573;InbreedingCoeff=0.6118;MQ=55.44;MQ0=17;MQRankSum=-0.780;QD=10.81;ReadPosRankSum=-0.287;VQSLOD=3.2333;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,24:33:42.14:729,42,0	0/0:16,0:16:42.10:0,42,555	0/1:14,0:3:5.86:6,0,34	0/0:33,0:8:7.57:0,8,86	0/0:32,0:32:81.25:0,81,1092	0/0:23,0:23:63.08:0,63,864	0/0:31,0:32:50.22:0,50,1100	0/0:48,0:44:99:0,120,1588	./.	0/0:41,0:40:99:0,114,1542	0/0:29,0:29:75.14:0,75,1004	0/1:4,0:4:0:0,0,0	1/1:5,0:5:1.25:3,1,0	0/0:38,0:37:99:0,102,1375	0/0:40,0:40:66.47:0,66,1409	0/0:43,0:43:99:0,111,1482	0/0:22,0:23:58.88:0,59,820	0/0:17,0:19:23.10:0,23,447	0/0:30,0:25:72.20:0,72,951	0/0:33,0:33:87.28:0,87,1191	0/0:49,0:48:99:0,116,1551	./.	./.	0/0:13,0:14:4.09:0,4,18	0/0:25,0:24:69.21:0,69,912	0/0:41,0:41:99:0,117,1579	0/0:30,0:30:81.24:0,81,1075	0/0:11,0:11:33.11:0,33,453
chr10	75582939	.	AGAGT	A	953.34	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=7.240;DP=744;FS=7.052;HRun=0;HaplotypeScore=150.6884;InbreedingCoeff=0.8388;MQ=53.76;MQ0=25;MQRankSum=-3.850;QD=8.59;ReadPosRankSum=-5.412;VQSLOD=0.4292;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:15,17:29:5.20:389,5,0	0/0:15,0:15:30.04:0,30,670	./.	0/0:13,0:1:0:0,0,0	0/0:31,0:30:75.17:0,75,1525	0/0:31,0:31:81.28:0,81,1769	0/0:35,0:35:85.08:0,85,1831	0/0:45,0:42:84.24:0,84,1757	1/1:13,0:13:11.95:129,12,0	0/0:49,0:44:99:0,120,2507	0/0:24,0:24:54.24:0,54,1039	1/1:10,0:10:9.03:143,9,0	1/1:17,0:17:23.84:259,24,0	0/0:41,0:40:96.30:0,96,2140	0/0:44,0:44:99:0,108,2376	0/0:41,0:41:99:0,102,2303	0/0:28,0:28:66.10:0,66,1379	0/0:21,0:21:53.90:0,54,973	0/0:25,0:16:33.09:0,33,685	0/0:32,0:31:69.24:0,69,1588	0/0:45,0:44:99:0,102,2448	0/1:9,0:8:0.01:0,0,0	1/1:9,0:6:1.24:2,1,0	1/1:20,0:21:7.64:184,8,0	0/0:29,0:28:72.20:0,72,1660	0/0:39,0:38:96.33:0,96,2140	0/0:27,0:27:69.22:0,69,1569	0/0:13,0:13:32.98:0,33,622
chr10	75583281	.	AGAGT	A	2466.57	PASS	AB=0.948;AC=12;AF=0.214;AN=56;BaseQRankSum=11.450;DP=892;FS=17.962;HRun=0;HaplotypeScore=186.5699;InbreedingCoeff=0.7874;MQ=62.60;MQ0=9;MQRankSum=0.229;QD=12.71;ReadPosRankSum=0.497;VQSLOD=2.2395;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:80.15:0,80,1770	0/0:19,0:19:54.14:0,54,1208	0/1:25,0:12:17.95:18,0,305	0/0:42,0:18:10.43:0,10,148	0/0:23,0:23:51.16:0,51,1213	0/0:30,0:30:81.23:0,81,1836	0/0:31,0:31:77.57:0,78,1661	0/0:32,0:32:66.19:0,66,1396	1/1:32,3:35:27.58:468,28,0	0/0:46,0:45:99:0,126,2947	0/0:22,0:22:54.03:0,54,1158	1/1:34,4:38:37.69:697,38,0	1/1:32,0:32:13.34:487,13,0	0/0:36,0:36:93.32:0,93,2304	0/0:53,0:52:99:0,141,3254	0/0:42,0:42:99:0,108,2614	0/0:37,0:36:96.33:0,96,2323	0/0:20,0:20:23.26:0,23,894	0/0:22,0:19:45.13:0,45,955	0/0:35,0:35:84.26:0,84,1970	0/0:61,0:61:99:0,166,3747	1/1:22,3:25:42.09:599,42,0	0/1:13,1:13:9.54:77,0,10	1/1:23,1:24:29.98:302,30,0	0/0:23,0:23:63.20:0,63,1506	0/0:39,0:39:99:0,105,2262	0/0:29,0:29:75.24:0,75,1689	0/0:15,0:15:44.52:0,45,1001
chr10	75583311	.	A	AGAGT	7340.44	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=11.583;DP=876;FS=1.415;HRun=0;HaplotypeScore=181.2801;InbreedingCoeff=0.9132;MQ=61.43;MQ0=5;MQRankSum=-0.739;QD=28.02;ReadPosRankSum=-0.563;VQSLOD=4.3358;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,34:43:33.33:1491,33,0	0/0:18,0:18:54.12:0,54,893	0/0:24,0:15:28.27:0,28,361	0/1:40,0:19:12.66:13,0,195	0/0:19,0:19:48.15:0,48,856	0/0:28,0:28:81.26:0,81,1471	0/0:27,0:27:45.79:0,46,1168	0/0:36,0:36:99:0,99,1676	1/1:36,0:37:47.03:1113,47,0	0/0:52,0:52:99:0,138,2460	0/0:20,0:20:54.13:0,54,907	1/1:33,2:34:91.91:1196,92,0	1/1:35,1:36:93.45:1396,93,0	0/0:38,0:38:99:0,102,1804	0/0:47,0:47:99:0,135,2362	0/0:34,0:34:99:0,102,1753	0/0:36,0:35:96.30:0,96,1705	0/0:19,0:19:44.71:0,45,731	0/0:21,0:21:60.13:0,60,847	0/0:30,0:30:81.05:0,81,1389	0/0:51,0:51:99:0,133,2371	1/1:23,1:24:57.03:771,57,0	1/1:14,0:13:35.98:472,36,0	1/1:31,1:32:55.57:890,56,0	0/0:29,0:29:78.23:0,78,1327	0/0:37,0:37:99:0,102,1672	0/0:31,0:31:90.29:0,90,1583	0/0:17,0:17:48.14:0,48,780
chr10	75583917	.	CTGTG	C	5270.03	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.002;DP=956;FS=4.848;HRun=0;HaplotypeScore=201.0535;InbreedingCoeff=0.9997;MQ=65.04;MQ0=2;MQRankSum=-11.424;QD=28.33;ReadPosRankSum=-5.509;VQSLOD=3.1801;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:81.20:0,81,1852	0/0:20,0:20:54.17:0,54,1313	0/0:48,0:38:80.41:0,80,1864	0/0:40,0:34:34.06:0,34,1190	0/0:30,0:30:78.25:0,78,1915	0/0:32,0:32:87.30:0,87,2131	0/0:23,0:23:51.56:0,52,1358	0/0:30,0:30:75.25:0,75,1794	1/1:8,27:34:80.97:1087,81,0	0/0:49,0:49:99:0,126,3059	0/0:33,0:33:90.29:0,90,2177	1/1:5,25:29:68.96:850,69,0	1/1:11,26:37:93.01:1311,93,0	0/0:51,0:51:99:0,135,3362	0/0:42,0:42:99:0,105,2583	0/0:46,0:48:99:0,120,2797	0/0:28,0:28:69.19:0,69,1638	0/0:25,0:25:61.49:0,61,1553	0/0:27,0:27:72.23:0,72,1720	0/0:31,0:31:90.31:0,90,2285	0/0:50,0:50:99:0,120,2937	1/1:6,23:29:71.96:834,72,0	1/1:5,27:32:65.96:803,66,0	1/1:9,14:22:27.04:386,27,0	0/0:25,0:25:60.21:0,60,1462	0/0:50,0:50:99:0,138,3364	0/0:26,0:27:75.05:0,75,1811	0/0:23,0:23:49.39:0,49,1141
chr10	75584261	.	G	GTA	8166.89	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-7.412;DP=1214;FS=4.286;HRun=0;HaplotypeScore=218.9761;InbreedingCoeff=0.9978;MQ=53.49;MQ0=16;MQRankSum=3.015;QD=32.15;ReadPosRankSum=3.271;VQSLOD=5.5646;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:83.85:0,84,1212	0/0:16,0:16:42.11:0,42,595	0/0:41,0:11:18.05:0,18,242	0/0:57,0:19:37.01:0,37,515	0/0:34,0:34:87.27:0,87,1285	0/0:42,1:43:99:0,113,1545	0/0:30,0:30:78.16:0,78,1093	0/0:47,0:46:99:0,129,1825	1/1:15,38:52:99:2090,123,0	0/0:73,0:73:99:0,214,3152	0/0:29,0:29:81.26:0,81,1206	1/1:13,32:45:61.56:1285,62,0	1/1:4,51:55:99:2157,114,0	0/0:55,0:55:99:0,159,2279	0/0:62,0:62:99:0,174,2522	0/0:43,0:44:99:0,126,1836	0/0:46,0:46:99:0,119,1688	0/0:28,0:28:69.03:0,69,961	0/0:27,0:21:54.18:0,54,795	0/0:45,0:45:99:0,114,1691	0/0:102,3:102:99:0,255,3685	1/1:7,32:39:59.68:1085,60,0	1/1:2,25:27:23.26:427,23,0	1/1:6,28:32:59.98:1123,60,0	0/0:39,0:39:90.19:0,90,1306	0/0:42,0:42:99:0,123,1812	0/0:42,0:42:99:0,123,1818	0/0:18,0:18:51.15:0,51,755
chr10	75584310	.	AGT	A	1507.38	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.441;DP=1141;FS=8.182;HRun=0;HaplotypeScore=254.7948;InbreedingCoeff=0.9467;MQ=57.99;MQ0=12;MQRankSum=-2.353;QD=8.82;ReadPosRankSum=0.296;VQSLOD=2.0835;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,120,2011	0/0:16,0:16:38.75:0,39,647	0/0:57,0:22:54.99:0,55,696	0/0:68,0:39:72.33:0,72,913	0/0:30,0:30:78.01:0,78,1293	0/0:37,0:37:87.71:0,88,1396	0/0:38,0:38:96.26:0,96,1526	0/0:50,0:48:99:0,114,1716	1/1:13,29:41:52.72:573,53,0	0/0:60,0:59:99:0,175,2873	0/0:32,0:32:83.46:0,83,1413	1/1:6,19:25:14.89:159,15,0	1/1:11,28:38:50.68:518,51,0	0/0:57,0:57:99:0,141,2347	0/0:59,0:59:99:0,141,2360	0/0:45,0:45:99:0,126,2096	0/0:40,0:40:94.40:0,94,1683	0/0:34,0:34:85.18:0,85,1389	0/0:26,0:23:63.20:0,63,1039	0/0:35,0:35:90.12:0,90,1520	0/0:106,0:103:99:0,237,3788	1/1:4,22:24:21:276,21,0	1/1:6,16:21:2.94:41,3,0	1/1:4,13:17:9:117,9,0	0/0:37,0:37:74.04:0,74,1273	0/0:47,0:47:99:0,132,2185	0/0:21,0:21:57.20:0,57,968	0/0:23,0:23:63.17:0,63,1008
chr10	75584353	.	GTGTGTA	G	563.97	PASS	AB=0.715;AC=9;AF=0.161;AN=56;BaseQRankSum=6.524;DP=1062;FS=6.454;HRun=0;HaplotypeScore=266.7195;InbreedingCoeff=0.5722;MQ=48.87;MQ0=90;MQRankSum=1.521;QD=5.48;ReadPosRankSum=-3.868;VQSLOD=0.8172;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:49:99:0,122,3744	0/0:15,0:15:33.05:0,33,971	0/0:60,0:9:21.05:0,21,460	0/0:65,0:17:23.99:0,24,436	0/0:28,0:28:75.26:0,75,2588	0/0:31,0:31:81.24:0,81,2714	0/0:45,0:39:84.20:0,84,2428	0/0:49,0:47:99:0,132,3936	1/1:16,11:23:26.94:341,27,0	0/0:73,0:63:99:0,184,5919	0/0:31,0:30:71.99:0,72,2503	0/1:8,4:11:0.01:1,0,0	0/1:9,10:17:95.16:178,0,95	0/0:55,0:55:99:0,141,4698	0/0:59,0:59:99:0,135,4453	0/0:42,0:41:99:0,120,4110	0/0:43,0:41:99:0,108,3370	0/0:34,0:34:96.10:0,96,2789	0/0:26,0:22:60.18:0,60,1944	0/0:36,0:36:90.24:0,90,3008	0/0:90,0:89:99:0,193,6432	0/1:11,6:15:94.63:130,0,95	1/1:5,4:8:2.72:25,3,0	1/1:13,6:17:2.99:24,3,0	0/0:22,0:22:57.18:0,57,1701	0/0:46,0:41:99:0,117,3875	0/0:35,0:34:84.27:0,84,2775	0/0:25,0:23:63.07:0,63,2177
chr10	75584416	.	A	AGT	678.20	PASS	AB=0.907;AC=17;AF=0.304;AN=56;BaseQRankSum=10.891;DP=1041;FS=29.362;HRun=0;HaplotypeScore=187.5636;InbreedingCoeff=0.0747;MQ=53.98;MQ0=40;MQRankSum=-0.178;QD=1.78;ReadPosRankSum=-0.943;VQSLOD=1.2859;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:48,4:55:28.95:29,0,1318	0/0:13,0:13:36.12:0,36,463	0/0:50,0:22:33.83:0,34,533	0/0:48,0:16:30.75:0,31,317	0/0:34,1:35:15.55:0,16,728	0/1:32,2:34:13.88:14,0,922	0/1:38,5:38:99:154,0,924	0/0:54,2:54:84.82:0,85,1579	1/1:8,2:7:3.74:26,4,0	0/0:73,1:68:99:0,166,2113	0/1:23,3:25:94.37:94,0,547	0/1:16,2:16:4.56:93,0,5	0/1:12,2:13:6.37:54,0,6	0/0:58,0:58:99:0,150,1851	0/0:47,1:48:99:0,120,1498	0/0:46,1:46:99:0,126,1606	0/0:36,1:37:39.58:0,40,1049	0/1:28,3:30:70.51:71,0,819	0/0:21,0:19:51.17:0,51,654	0/1:49,4:52:69.90:70,0,1379	0/0:89,4:92:94.48:0,94,2324	0/1:5,1:6:1.18:59,0,1	1/1:4,0:4:2.50:9,2,0	1/1:11,2:12:5.50:59,6,0	0/0:28,1:29:26.92:0,27,823	0/1:47,3:50:10.27:10,0,1551	0/0:47,0:46:99:0,102,1280	0/1:18,3:22:97.58:98,0,497
chr10	75584418	.	T	TAA	931.24	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.274;DP=1051;FS=2.727;HRun=0;HaplotypeScore=192.8212;InbreedingCoeff=0.9156;MQ=54.01;MQ0=37;MQRankSum=-2.768;QD=13.12;ReadPosRankSum=-4.797;VQSLOD=2.7457;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,115,1869	0/0:14,0:14:39.12:0,39,612	0/0:49,0:22:65.03:0,65,909	0/0:53,0:18:33.93:0,34,513	0/0:33,0:33:62.46:0,62,1023	0/0:35,0:35:72.35:0,72,1351	0/0:43,0:40:72.91:0,73,1365	0/0:58,0:56:99:0,157,2510	1/1:9,2:8:12.47:171,12,0	0/0:73,0:67:99:0,199,3187	0/0:26,0:25:38.05:0,38,809	1/1:13,6:17:12.31:380,12,0	1/1:12,5:15:28.09:325,28,0	0/0:58,0:58:99:0,165,2599	0/0:47,0:47:99:0,120,1952	0/0:48,0:47:99:0,138,2212	0/0:40,0:38:79.39:0,79,1451	0/0:31,0:30:68.23:0,68,1205	0/0:23,0:20:57.18:0,57,901	0/0:53,0:52:99:0,111,1964	0/0:92,0:92:99:0,199,3413	1/1:4,2:6:6.95:86,7,0	1/1:0,4:4:3.95:62,4,0	1/1:12,2:12:6.28:74,6,0	0/0:30,0:30:81.11:0,81,1310	0/0:49,0:49:99:0,128,2225	0/0:48,0:47:99:0,126,1977	0/0:23,0:22:29.12:0,29,731
chr10	75584425	.	GTA	G	1221.25	PASS	AB=0.856;AC=10;AF=0.179;AN=56;BaseQRankSum=8.276;DP=1080;FS=0.504;HRun=0;HaplotypeScore=199.6481;InbreedingCoeff=0.7916;MQ=55.07;MQ0=23;MQRankSum=0.692;QD=13.57;ReadPosRankSum=-6.180;VQSLOD=1.7717;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,115,2308	0/0:13,0:13:39.13:0,39,741	0/0:51,0:23:64.35:0,64,984	0/0:54,0:23:27.72:0,28,622	0/0:35,0:35:72.19:0,72,1290	0/0:39,0:39:99:0,103,1709	0/0:41,0:39:99:0,114,1860	0/0:60,0:58:99:0,164,2904	1/1:16,1:15:29.86:318,30,0	0/0:71,0:69:99:0,186,3347	0/0:25,0:25:58.54:0,59,1033	1/1:18,4:20:35.60:402,36,0	1/1:17,4:19:10.92:392,11,0	0/0:56,0:56:99:0,118,2752	0/0:48,0:48:99:0,126,2323	0/0:48,0:47:99:0,135,2499	0/0:41,0:40:99:0,102,1743	0/0:33,0:32:90.21:0,90,1507	0/0:21,0:20:57.19:0,57,1060	0/0:53,0:53:99:0,139,2486	0/0:94,0:94:99:0,219,3927	0/1:8,1:9:14.09:129,0,14	1/1:8,0:8:14.68:124,15,0	0/1:10,3:11:3.10:21,0,3	0/0:30,0:30:84.21:0,84,1446	0/0:52,0:52:99:0,150,2724	0/0:44,0:43:99:0,108,1990	0/0:23,0:22:23.30:0,23,901
chr10	75584673	.	ATGTGAGTG	A	17543.56	PASS	AB=0.783;AC=51;AF=0.911;AN=56;BaseQRankSum=3.002;DP=922;FS=2.051;HRun=0;HaplotypeScore=301.3593;InbreedingCoeff=0.6151;MQ=40.01;MQ0=92;MQRankSum=-1.581;QD=21.34;ReadPosRankSum=0.018;VQSLOD=3.8983;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,24:42:35.47:565,35,0	1/1:3,11:12:14.77:257,15,0	0/0:45,0:7:12.04:0,12,234	0/0:54,0:13:1.84:0,2,832	1/1:6,16:20:24.08:359,24,0	1/1:3,23:25:33.11:573,33,0	1/1:7,18:24:12.04:203,12,0	1/1:33,26:54:68.85:968,69,0	1/1:15,30:38:38.76:691,39,0	1/1:20,33:44:87.19:2059,87,0	1/1:8,16:21:26.48:393,26,0	1/1:22,19:34:62.61:1223,63,0	1/1:24,12:31:44.85:974,45,0	1/1:16,25:39:39.13:715,39,0	1/1:15,50:60:65.30:994,65,0	1/1:14,24:35:31.51:514,32,0	0/1:13,5:15:19.18:83,0,19	1/1:11,1:9:21:411,21,0	1/1:6,11:16:33.09:644,33,0	1/1:8,21:29:38.41:543,38,0	1/1:27,4:23:31.18:566,31,0	1/1:9,21:28:35.81:539,36,0	1/1:10,8:15:30.09:438,30,0	1/1:15,3:14:9.03:214,9,0	1/1:6,19:25:29.33:505,29,0	1/1:8,34:38:84.29:2021,84,0	1/1:5,31:36:33.11:668,33,0	1/1:2,11:12:18.06:422,18,0
chr10	75584905	.	AAAAAC	A	4349.56	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.978;DP=677;FS=13.174;HRun=0;HaplotypeScore=127.0518;InbreedingCoeff=0.9992;MQ=70.76;MQ0=1;MQRankSum=-3.937;QD=34.25;ReadPosRankSum=2.755;VQSLOD=4.2051;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:81.28:0,81,2212	0/0:10,0:10:30.10:0,30,882	0/0:19,0:18:32.57:0,33,768	0/0:32,0:28:40.70:0,41,838	0/0:40,0:38:90.30:0,90,2572	0/0:24,0:23:60.20:0,60,1631	0/0:12,0:12:33.11:0,33,897	0/0:26,0:26:48.16:0,48,1190	1/1:1,14:15:27.05:485,27,0	0/0:38,0:37:90.31:0,90,2510	0/0:28,0:28:75.26:0,75,2109	1/1:4,13:17:27.09:523,27,0	1/1:2,20:22:45.15:867,45,0	0/0:17,0:16:36.11:0,36,881	0/0:24,0:24:42.14:0,42,1151	0/0:22,0:22:57.20:0,57,1617	0/0:16,0:15:42.14:0,42,1204	0/0:18,0:18:38.16:0,38,1027	0/0:24,0:24:57.19:0,57,1468	0/0:45,0:45:99:0,114,3231	0/0:22,0:22:57.18:0,57,1514	1/1:7,20:27:51.17:963,51,0	1/1:5,19:24:48.16:930,48,0	1/1:2,20:22:30.10:581,30,0	0/0:23,0:23:54.18:0,54,1488	0/0:30,0:30:81.28:0,81,2321	0/0:34,0:34:84.29:0,84,2335	0/0:14,0:14:36.11:0,36,993
chr10	75585043	.	G	GA	2734.87	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.286;DP=551;FS=10.272;HRun=8;HaplotypeScore=58.5037;InbreedingCoeff=0.9832;MQ=79.47;MQ0=0;MQRankSum=-1.466;QD=26.55;ReadPosRankSum=3.150;VQSLOD=4.0592;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:33.01:0,33,302	0/0:8,0:8:18.01:0,18,165	0/0:31,0:31:67.84:0,68,546	0/0:14,0:13:16.33:0,16,144	0/0:20,0:20:48.02:0,48,439	0/0:29,0:29:80.96:0,81,730	0/0:14,0:14:42:0,42,375	0/0:29,0:29:78.02:0,78,705	1/1:2,17:19:48.14:554,48,0	0/0:24,0:24:60.01:0,60,541	0/0:25,0:25:60:0,60,543	1/1:2,13:15:36.11:417,36,0	1/1:1,15:16:42.12:486,42,0	0/0:6,0:6:12:0,12,110	0/0:20,0:20:56.98:0,57,507	0/0:17,0:17:48.01:0,48,433	0/0:20,0:20:59.97:0,60,531	0/0:19,0:19:42:0,42,384	0/0:15,1:17:11.99:0,12,332	0/0:30,0:30:77.96:0,78,697	0/0:20,0:20:48.02:0,48,439	1/1:5,14:19:48.07:530,48,0	1/1:3,21:23:29.58:597,30,0	1/1:1,9:10:30.08:339,30,0	0/0:24,0:25:68.07:0,68,610	0/0:25,0:25:63.02:0,63,573	0/0:28,0:28:75.02:0,75,686	0/0:15,0:15:42.02:0,42,384
chr10	75585330	.	GAC	G	2760.79	PASS	AB=0.909;AC=15;AF=0.268;AN=56;BaseQRankSum=17.216;DP=1023;FS=18.670;HRun=0;HaplotypeScore=169.5026;InbreedingCoeff=0.8881;MQ=61.65;MQ0=9;MQRankSum=0.041;QD=8.65;ReadPosRankSum=1.761;VQSLOD=2.4034;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:48,0:48:76.29:555,76,0	0/0:10,0:10:27.09:0,27,434	0/0:48,0:18:22.70:0,23,216	0/0:46,0:20:11:0,11,179	0/0:33,0:33:44.11:0,44,1227	0/0:28,0:29:69.21:0,69,1058	0/1:36,4:40:59.22:59,0,1029	0/0:35,0:35:47.18:0,47,1236	1/1:34,0:34:59.40:408,59,0	0/0:46,0:46:99:0,120,1953	0/0:27,0:27:68.18:0,68,1037	1/1:46,0:47:77.28:544,77,0	1/1:37,0:36:58.80:496,59,0	0/0:31,0:31:81.26:0,81,1285	0/0:48,0:48:99:0,115,1843	0/0:40,1:40:50.45:0,50,1564	0/0:36,0:37:64.18:0,64,1426	0/0:23,0:23:8.92:0,9,555	0/0:28,1:24:14.07:0,14,697	0/0:36,0:36:99:0,99,1500	0/0:83,1:82:99:0,164,2960	1/1:43,0:44:44.46:302,44,0	1/1:29,0:29:41.71:301,42,0	1/1:38,0:37:41.71:296,42,0	0/0:27,0:27:59.70:0,60,848	0/0:35,2:37:21.76:0,22,1357	0/0:28,0:28:63.22:0,63,1027	0/0:9,0:9:27.04:0,27,382
chr10	75585345	.	ACT	A	6285.31	PASS	AB=0.993;AC=17;AF=0.304;AN=56;BaseQRankSum=17.153;DP=1036;FS=9.617;HRun=0;HaplotypeScore=154.7236;InbreedingCoeff=0.7787;MQ=54.53;MQ0=16;MQRankSum=-0.289;QD=16.37;ReadPosRankSum=4.957;VQSLOD=4.1180;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,23:47:78.11:1268,78,0	0/0:11,0:11:30.08:0,30,500	0/1:43,1:11:41.15:41,0,170	0/1:52,0:11:3.30:3,0,121	0/0:30,0:30:71.38:0,71,1389	0/0:30,0:30:61.87:0,62,1255	0/0:40,0:40:40.65:0,41,1257	0/0:41,0:41:99:0,114,1542	1/1:9,25:31:41.37:866,41,0	0/0:47,0:46:99:0,135,2219	0/0:26,0:26:64.75:0,65,1161	1/1:6,41:45:79.10:1159,79,0	1/1:1,31:30:69.23:1035,69,0	0/0:32,0:32:96.27:0,96,1654	0/0:48,0:48:99:0,136,2078	0/0:40,1:39:66.09:0,66,1819	0/0:40,0:40:90.85:0,91,1794	0/1:19,0:19:9.33:9,0,554	0/0:32,0:23:42.92:0,43,916	0/0:41,0:41:99:0,120,1775	0/0:91,0:88:99:0,185,3410	1/1:3,37:40:36.81:628,37,0	1/1:1,28:29:42.11:638,42,0	1/1:7,32:38:41.89:638,42,0	0/0:28,0:28:50.51:0,51,998	0/0:38,0:37:78.28:0,78,1557	0/0:26,0:26:75.20:0,75,1271	0/0:10,0:9:24.03:0,24,391
chr10	75585347	.	TCA	T	2416.70	PASS	AB=0.967;AC=14;AF=0.250;AN=56;BaseQRankSum=16.477;DP=1055;FS=9.290;HRun=0;HaplotypeScore=169.5812;InbreedingCoeff=0.7353;MQ=54.32;MQ0=17;MQRankSum=0.366;QD=7.90;ReadPosRankSum=6.002;VQSLOD=2.4834;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:47,0:47:24.32:452,24,0	0/0:11,0:11:27.06:0,27,400	0/0:43,0:10:11.96:0,12,159	0/0:54,0:10:20.45:0,20,216	0/0:29,0:29:74.99:0,75,1165	0/0:31,0:31:72.69:0,73,1103	0/0:40,1:41:63.27:0,63,1266	0/0:40,0:40:87.28:0,87,1347	0/1:38,0:33:18.24:334,0,18	0/0:50,0:49:99:0,120,1913	0/0:25,1:26:31.70:0,32,970	1/1:50,0:47:43.57:484,44,0	1/1:32,0:30:68.54:506,69,0	0/0:34,0:34:99:0,99,1590	0/0:48,0:48:99:0,115,1830	0/0:41,0:39:84.49:0,84,1601	0/0:40,0:40:99:0,108,1695	0/0:18,1:19:1.69:0,2,500	0/0:34,0:23:59.95:0,60,927	0/0:40,0:40:99:0,102,1589	0/0:93,1:90:99:0,134,3079	1/1:40,0:40:25.87:269,26,0	1/1:29,0:29:41.69:299,42,0	1/1:41,0:41:0.26:247,0,0	0/1:26,2:28:5.83:6,0,927	0/0:38,0:37:57.74:0,58,1288	0/0:26,0:26:72.25:0,72,1174	0/0:10,0:9:21.07:0,21,342
chr10	75585411	.	TCA	T	1974.24	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.630;DP=1103;FS=40.086;HRun=0;HaplotypeScore=201.6877;InbreedingCoeff=0.9470;MQ=52.41;MQ0=38;MQRankSum=-3.049;QD=10.23;ReadPosRankSum=3.551;VQSLOD=1.8219;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,1:45:84.17:0,84,1241	0/0:18,0:15:34:0,34,535	0/0:55,0:6:11.70:0,12,127	0/0:71,2:12:5.14:0,5,200	0/0:27,0:26:66.18:0,66,1057	0/0:28,0:28:63.18:0,63,951	0/0:45,1:45:99:0,102,1559	0/0:49,0:47:99:0,114,1687	1/1:14,29:39:53.31:662,53,0	0/0:58,0:57:99:0,141,2250	0/0:25,0:25:69.22:0,69,1087	1/1:13,24:33:28.98:366,29,0	1/1:8,26:32:44.84:559,45,0	0/0:43,0:43:99:0,111,1701	0/0:47,0:47:99:0,118,1956	0/0:34,0:33:86.95:0,87,1393	0/0:47,1:48:81.99:0,82,1755	0/0:28,0:27:80.70:0,81,1203	0/0:28,1:22:51.15:0,51,816	0/0:42,0:42:99:0,106,1536	0/0:108,0:104:99:0,226,3552	1/1:8,23:31:7.77:113,8,0	1/1:8,11:19:14.25:190,14,0	1/1:12,17:28:20.70:267,21,0	0/0:28,0:28:64.55:0,65,1002	0/0:39,0:38:85.87:0,86,1359	0/0:24,2:26:37.03:0,37,1125	0/0:9,0:9:18.06:0,18,301
chr10	75585423	.	ACT	A	623.04	PASS	AB=0.994;AC=8;AF=0.143;AN=56;BaseQRankSum=13.254;DP=1082;FS=28.805;HRun=0;HaplotypeScore=206.7761;InbreedingCoeff=0.0983;MQ=53.58;MQ0=24;MQRankSum=-4.394;QD=2.49;ReadPosRankSum=-0.024;VQSLOD=0.9743;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:95.26:0,95,1524	0/0:20,0:17:21.87:0,22,617	0/1:62,0:12:7.92:8,0,140	0/0:71,1:21:7.64:0,8,241	0/0:27,0:26:74.95:0,75,1244	0/0:25,0:25:60.18:0,60,1026	0/0:44,0:43:99:0,114,1871	0/0:50,0:48:99:0,135,2175	1/1:38,1:34:5.36:258,5,0	0/0:54,0:53:99:0,150,2592	0/0:27,0:27:76.76:0,77,1242	0/1:38,0:35:79.33:131,0,79	0/1:34,0:32:40.03:207,0,40	0/0:44,0:44:99:0,105,1941	0/0:46,1:47:99:0,133,2382	0/0:33,0:32:95.93:0,96,1592	0/0:43,0:43:99:0,105,2061	0/0:31,0:30:73.74:0,74,1444	0/0:31,0:22:60.09:0,60,1005	0/0:39,0:39:56.32:0,56,1482	0/0:94,0:89:99:0,221,4058	0/1:27,1:28:34.17:34,0,37	0/1:18,0:18:8.76:56,0,9	0/1:30,0:29:61.72:62,0,107	0/0:29,0:29:27.24:0,27,1054	0/0:37,0:35:81.13:0,81,1665	0/0:29,1:30:69.71:0,70,1380	0/0:14,0:14:42.01:0,42,586
chr10	75585449	.	ACACT	A	4314.56	PASS	AB=0.857;AC=12;AF=0.214;AN=56;BaseQRankSum=8.547;DP=1165;FS=31.825;HRun=0;HaplotypeScore=267.6488;InbreedingCoeff=0.7979;MQ=59.68;MQ0=22;MQRankSum=-3.037;QD=15.30;ReadPosRankSum=-5.614;VQSLOD=2.0600;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:99:0,102,2349	0/0:20,0:17:42.14:0,42,949	0/1:71,0:25:34.29:34,0,480	0/0:99,0:35:1.19:0,1,445	0/0:35,0:35:96.33:0,96,2297	0/0:24,0:24:51.13:0,51,1185	0/0:40,0:40:89.71:0,90,2201	0/0:57,0:57:99:0,123,2870	0/1:21,14:34:0.92:695,0,1	0/0:59,0:59:99:0,154,3566	0/0:28,0:28:66.20:0,66,1377	1/1:20,21:41:59.56:967,60,0	1/1:18,25:42:83.93:1291,84,0	0/0:43,0:43:99:0,117,2723	0/0:49,0:49:99:0,126,3086	0/0:46,0:46:99:0,123,2972	0/0:48,0:48:99:0,106,2571	0/0:29,0:28:72.22:0,72,1619	0/0:31,0:29:69.23:0,69,1605	0/0:33,0:33:81.28:0,81,1868	0/0:86,0:83:99:0,208,4979	1/1:14,18:32:20.45:365,20,0	1/1:11,11:22:20.38:365,20,0	1/1:19,18:36:35.61:597,36,0	0/0:24,0:24:54.02:0,54,1270	0/0:47,0:46:99:0,127,2940	0/0:29,0:29:63.20:0,63,1486	0/0:14,0:14:39.13:0,39,979
chr10	75585512	.	G	GAC	1171.83	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.941;DP=1244;FS=6.533;HRun=0;HaplotypeScore=184.3278;InbreedingCoeff=0.9614;MQ=54.78;MQ0=30;MQRankSum=2.113;QD=29.30;ReadPosRankSum=1.313;VQSLOD=4.3021;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,26:39:78.26:1267,78,0	0/0:20,0:20:47.95:0,48,564	0/0:69,0:14:16.96:0,17,191	0/0:59,1:16:15.25:0,15,291	0/0:44,0:43:98.67:0,99,1204	0/0:25,0:25:40.12:0,40,667	0/0:42,0:43:99:0,102,1190	0/0:52,0:49:99:0,108,1340	0/0:43,0:41:83.82:0,84,1021	0/0:46,0:46:86.81:0,87,1244	0/0:24,0:24:15.44:0,15,613	0/0:61,0:59:99:0,117,1409	0/0:47,0:48:65.01:0,65,1122	0/0:57,0:57:99:0,141,1736	0/0:65,0:65:99:0,166,2046	0/0:48,0:48:99:0,122,1501	0/0:47,0:47:99:0,132,1620	0/0:25,0:25:38.10:0,38,642	0/0:36,0:25:60.15:0,60,712	0/0:31,0:31:59.70:0,60,905	0/0:124,0:122:99:0,267,3262	0/0:39,0:40:98.40:0,98,1184	0/0:37,0:40:86.93:0,87,1077	0/0:45,0:47:62.05:0,62,773	0/0:13,0:15:33.92:0,34,365	0/0:35,0:35:82.49:0,82,1007	0/0:30,0:29:77.98:0,78,919	0/0:24,0:24:51.16:0,51,631
chr10	75585640	.	G	GACACAC	355.13	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.902;DP=1043;FS=1.619;HRun=0;HaplotypeScore=214.8341;InbreedingCoeff=0.8387;MQ=63.04;MQ0=16;MQRankSum=-1.390;QD=4.13;ReadPosRankSum=-5.540;VQSLOD=1.3271;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,108,2177	0/0:9,0:9:27.07:0,27,521	0/0:83,0:28:30.55:0,31,627	0/0:111,0:50:41.41:0,41,943	0/0:26,0:26:62.82:0,63,1131	0/0:20,0:20:56.83:0,57,1091	0/0:39,0:39:99:0,105,2142	0/0:56,0:54:99:0,135,2761	1/1:7,13:18:0.47:1,0,0	0/0:33,0:33:81.26:0,81,1668	0/0:22,0:22:54.97:0,55,1063	1/1:5,5:10:3.01:49,3,0	1/1:7,0:8:12.03:259,12,0	0/0:47,0:47:99:0,126,2296	0/0:39,0:39:83.50:0,83,1705	0/0:43,0:43:99:0,102,2068	0/0:33,0:33:71.91:0,72,1650	0/0:38,0:37:94.61:0,95,2196	0/0:26,0:23:60.18:0,60,1182	0/0:28,0:28:63.23:0,63,1466	0/0:150,0:149:99:0,368,7467	1/1:10,2:12:6:74,6,0	1/1:6,3:10:5.99:49,6,0	1/1:21,3:25:5.87:68,6,0	0/0:23,0:23:50.81:0,51,909	0/0:26,0:26:65.91:0,66,1262	0/0:20,0:20:48.25:0,48,1131	0/0:27,0:27:62.94:0,63,1194
chr10	75585644	.	CACACTCACTCACTCACAG	C	404.35	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=6.027;DP=1037;FS=3.715;HRun=0;HaplotypeScore=411.7148;InbreedingCoeff=0.7437;MQ=62.89;MQ0=18;MQRankSum=-0.687;QD=2.30;ReadPosRankSum=-6.400;VQSLOD=0.1469;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,124,6306	0/0:9,0:9:27.08:0,27,1567	0/0:85,0:27:48.56:0,49,1117	0/1:112,0:48:65.48:65,0,1292	0/0:25,0:25:66.23:0,66,2948	0/0:21,0:21:63.20:0,63,2757	0/0:40,0:40:99:0,108,5253	0/0:58,0:56:99:0,144,4951	0/0:15,1:14:0.89:0,1,2	0/0:30,0:30:84.28:0,84,4490	0/0:22,0:22:60.05:0,60,3095	1/1:7,2:9:2.91:25,3,0	1/1:6,1:7:12.03:268,12,0	0/0:47,0:47:99:0,132,6299	0/0:38,0:38:95.93:0,96,5335	0/0:43,0:43:99:0,108,5696	0/0:34,0:34:93.71:0,94,4741	0/0:40,0:39:99:0,111,5608	0/0:26,0:23:60.19:0,60,2563	0/0:29,0:29:84.27:0,84,4253	0/0:146,0:145:99:0,382,20577	1/1:10,1:11:6.01:74,6,0	1/1:8,0:8:5.99:49,6,0	1/1:23,2:24:8.81:75,9,0	0/0:23,0:23:59.04:0,59,2730	0/0:26,0:26:72.23:0,72,3621	0/0:21,0:21:60.21:0,60,3034	0/0:25,0:25:51.19:0,51,3552
chr10	75585708	.	GACAC	G	1222.49	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.640;DP=1016;FS=3.799;HRun=0;HaplotypeScore=183.0465;InbreedingCoeff=0.9774;MQ=54.79;MQ0=34;MQRankSum=2.488;QD=22.64;ReadPosRankSum=4.089;VQSLOD=3.5115;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,45:54:77.07:1317,77,0	0/0:13,0:13:36.12:0,36,918	0/0:61,0:14:38.39:0,38,666	0/0:64,0:12:17.35:0,17,217	0/0:29,0:29:71.94:0,72,1408	0/0:29,0:29:79.50:0,79,1884	0/0:32,0:32:84.22:0,84,1951	0/0:42,0:41:96.19:0,96,1865	0/0:24,0:23:54.11:0,54,900	0/0:42,0:42:99:0,111,2338	0/0:33,0:33:84.23:0,84,1853	0/0:17,0:17:39.07:0,39,709	0/0:18,0:18:46.62:0,47,609	0/0:43,0:43:99:0,99,2168	0/0:44,0:44:99:0,123,2640	0/0:39,0:39:99:0,102,2404	0/0:39,0:39:98.51:0,99,2221	0/0:40,0:38:70.06:0,70,2056	0/0:24,0:18:47.90:0,48,867	0/0:41,0:41:99:0,114,2709	0/0:96,0:95:99:0,229,4843	0/0:26,0:26:45.11:0,45,699	0/0:15,0:14:26.98:0,27,352	0/0:30,0:30:16.12:0,16,272	0/0:31,0:31:84.20:0,84,1843	0/0:32,0:33:83.42:0,83,1869	0/0:27,0:28:78.01:0,78,1674	0/0:25,0:25:63.11:0,63,1389
chr10	75589005	.	GAC	G	1229.14	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.599;DP=939;FS=12.973;HRun=0;HaplotypeScore=133.8017;InbreedingCoeff=0.9731;MQ=45.89;MQ0=50;MQRankSum=0.114;QD=7.93;ReadPosRankSum=1.566;VQSLOD=2.4493;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:45:90.26:0,90,1469	0/0:10,0:10:18.04:0,18,283	0/0:42,0:6:15:0,15,155	0/0:59,0:11:20.60:0,21,356	0/0:26,0:26:38.93:0,39,570	0/0:29,0:29:48.59:0,49,774	0/0:38,0:38:60.28:0,60,1234	0/0:50,0:40:99:0,105,1512	1/1:1,17:18:20.88:214,21,0	0/0:47,0:43:99:0,105,1576	0/0:26,0:25:32.96:0,33,491	1/1:4,17:21:26.98:315,27,0	1/1:3,16:19:20.72:248,21,0	0/0:18,0:18:24.06:0,24,380	0/0:23,0:23:36.04:0,36,505	0/0:19,0:19:29.89:0,30,422	0/0:43,0:42:44.42:0,44,1294	0/0:22,0:22:60.15:0,60,948	0/0:27,0:22:48.05:0,48,676	0/0:27,0:25:52.27:0,52,802	0/0:140,0:136:99:0,319,5009	1/1:8,23:30:14.79:199,15,0	1/1:12,8:20:8.04:93,8,0	1/1:8,38:46:27.07:343,27,0	0/0:20,0:20:41.99:0,42,668	0/0:41,0:39:99:0,108,1618	0/0:20,0:20:37.34:0,37,539	0/0:10,0:10:27.09:0,27,465
chr10	75589039	.	G	GAC	1115.32	PASS	AB=0.904;AC=12;AF=0.214;AN=56;BaseQRankSum=8.789;DP=889;FS=8.571;HRun=0;HaplotypeScore=165.5909;InbreedingCoeff=0.6572;MQ=45.16;MQ0=29;MQRankSum=-3.122;QD=6.23;ReadPosRankSum=-4.127;VQSLOD=1.6244;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:60.64:0,61,750	0/0:17,0:17:30.97:0,31,389	0/0:39,0:7:8.51:0,9,73	0/0:58,0:15:20.80:0,21,229	0/0:26,0:26:38.95:0,39,486	0/0:27,0:27:36.34:0,36,449	0/0:36,0:36:71.82:0,72,834	0/0:61,0:55:99:0,100,1161	1/1:14,9:23:10.43:183,10,0	0/0:43,0:40:79.59:0,80,1229	0/0:27,0:25:33.36:0,33,381	1/1:14,16:30:3.88:344,4,0	1/1:12,9:19:21.05:322,21,0	0/0:20,0:20:29.70:0,30,374	0/0:23,0:23:36.11:0,36,450	0/0:16,0:17:23.68:0,24,276	0/0:39,0:38:57.36:0,57,704	0/0:14,0:16:32.77:0,33,365	0/0:17,0:12:23.29:0,23,269	0/0:22,0:19:36.11:0,36,450	0/0:110,0:112:99:0,208,2551	1/1:15,11:23:9.03:142,9,0	1/1:7,12:17:0.47:1,0,0	0/1:31,10:42:51.01:241,0,51	0/0:20,0:20:32.93:0,33,394	0/0:38,0:35:86.47:0,86,1066	0/1:18,0:18:37.12:37,0,199	0/0:13,0:13:36.11:0,36,450
chr10	75589049	.	C	CAG	578.37	PASS	AB=0.979;AC=8;AF=0.143;AN=56;BaseQRankSum=9.114;DP=836;FS=15.721;HRun=0;HaplotypeScore=166.1520;InbreedingCoeff=0.2740;MQ=44.55;MQ0=25;MQRankSum=-2.442;QD=3.81;ReadPosRankSum=-1.036;VQSLOD=1.8969;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:66.59:0,67,959	0/0:17,0:17:22.36:0,22,501	0/0:36,0:7:8.17:0,8,136	0/0:49,0:14:24.72:0,25,373	0/0:25,0:25:38.95:0,39,595	0/0:25,0:25:36.35:0,36,550	0/0:35,0:35:80.64:0,81,1137	0/0:51,0:46:99:0,114,1603	0/1:22,0:23:28.39:66,0,28	0/0:45,0:41:99:0,117,1625	0/0:25,0:23:33.43:0,33,493	0/1:31,1:31:9.57:178,0,10	1/1:20,2:20:0.61:237,1,0	0/0:18,0:19:29.71:0,30,456	0/0:23,0:22:38.60:0,39,560	0/0:16,0:16:26.70:0,27,355	0/0:32,0:31:48.14:0,48,886	0/0:15,0:15:35.88:0,36,465	0/0:18,0:11:26.96:0,27,357	0/0:21,0:18:36.12:0,36,550	0/0:104,0:103:99:0,250,3466	1/1:24,0:21:8.95:67,9,0	0/0:18,0:17:2.03:0,2,24	0/1:34,0:34:99:101,0,113	0/0:20,0:20:33.08:0,33,495	0/0:37,0:35:95.57:0,96,1360	0/1:16,1:17:61.25:61,0,274	0/0:13,0:13:36.12:0,36,548
chr10	75613893	.	ACACT	A	606.42	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.627;DP=950;FS=24.550;HRun=0;HaplotypeScore=221.6337;InbreedingCoeff=0.7102;MQ=41.36;MQ0=31;MQRankSum=-2.832;QD=17.84;ReadPosRankSum=2.813;VQSLOD=1.5195;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,26:34:39.98:701,40,0	0/0:8,0:8:5.11:0,5,330	0/0:66,0:15:38.96:0,39,927	0/0:77,0:27:58.15:0,58,1035	0/0:34,0:34:35.63:0,36,851	0/0:27,0:27:36.07:0,36,844	0/0:37,0:37:77.84:0,78,1966	0/0:23,0:22:60.17:0,60,1473	0/0:35,0:35:59.24:0,59,1278	0/0:56,0:55:54.01:0,54,3026	0/0:19,0:19:11.85:0,12,322	0/0:38,0:38:64.59:0,65,1469	0/0:33,0:33:68.10:0,68,1377	0/0:21,0:21:34.98:0,35,760	0/0:42,0:42:60.06:0,60,1515	0/0:13,0:13:23.78:0,24,586	0/0:23,0:23:54.17:0,54,1280	0/0:21,0:21:50.73:0,51,1466	0/0:27,0:21:30.74:0,31,899	0/0:41,0:40:89.88:0,90,2198	0/0:60,0:60:99:0,117,2997	0/0:55,0:55:61.46:0,61,1210	0/0:27,0:27:41.71:0,42,920	0/0:31,0:31:63.06:0,63,1423	0/0:34,0:34:41.46:0,41,1115	0/0:40,0:40:99:0,103,2452	0/0:17,0:17:34.52:0,35,777	0/0:11,0:11:0.75:0,1,642
chr10	75613895	.	ACT	A	156.99	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=9.372;DP=961;FS=28.365;HRun=0;HaplotypeScore=202.2371;InbreedingCoeff=0.6478;MQ=41.57;MQ0=29;MQRankSum=-4.437;QD=3.74;ReadPosRankSum=1.603;VQSLOD=1.0959;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:34:40.36:251,40,0	0/1:8,0:8:1.86:2,0,233	0/0:69,1:16:41.78:0,42,703	0/0:77,0:25:50.53:0,51,693	0/0:33,1:34:35.77:0,36,595	0/0:27,0:27:36.07:0,36,620	0/0:36,0:36:80.93:0,81,1450	0/0:22,0:21:60.16:0,60,1045	0/0:39,0:39:68.32:0,68,1030	0/0:55,2:57:51.03:0,51,2195	0/0:20,0:20:12:0,12,231	0/0:37,0:37:62.66:0,63,1059	0/0:33,0:33:66.48:0,66,1057	0/0:21,0:21:34.91:0,35,575	0/0:43,0:43:63.19:0,63,1121	0/0:13,0:13:23.75:0,24,425	0/0:23,0:23:53.97:0,54,937	0/0:21,0:21:42.44:0,42,1022	0/0:26,0:19:23.99:0,24,634	0/0:40,1:40:88.26:0,88,1593	0/0:61,0:61:99:0,120,2200	0/0:56,1:57:64.83:0,65,989	0/0:27,0:27:41.79:0,42,699	0/0:31,0:31:63.05:0,63,1032	0/0:33,1:34:26.11:0,26,786	0/0:41,0:41:99:0,105,1869	0/0:17,0:17:23.60:0,24,527	0/0:10,1:11:3.30:0,3,443
chr10	75614232	.	C	CA	6576.92	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=17.491;DP=715;FS=2.839;HRun=1;HaplotypeScore=88.9717;InbreedingCoeff=0.9999;MQ=85.94;MQ0=0;MQRankSum=-0.747;QD=39.38;ReadPosRankSum=2.398;VQSLOD=5.5069;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1500	0/0:13,0:13:36.12:0,36,467	0/0:27,0:27:74.86:0,75,929	0/0:19,0:19:48.15:0,48,605	0/0:34,0:34:93.27:0,93,1179	0/0:19,0:19:57.16:0,57,723	0/0:25,0:25:72.20:0,72,905	0/0:28,0:28:78.25:0,78,1013	1/1:0,31:31:87.29:1263,87,0	0/0:34,0:34:96.31:0,96,1246	0/0:25,0:25:72.21:0,72,905	1/1:1,14:15:39.13:553,39,0	1/1:0,36:36:99:1432,99,0	0/0:18,0:18:54.15:0,54,671	0/0:22,0:22:63.19:0,63,804	0/0:24,0:24:72.23:0,72,935	0/0:22,0:22:60.17:0,60,762	0/0:21,0:21:63.20:0,63,818	0/0:26,0:26:78.22:0,78,982	0/0:33,0:33:93.28:0,93,1177	0/0:22,0:22:63.20:0,63,818	1/1:0,32:32:87.25:1236,87,0	1/1:1,37:38:99:1526,108,0	1/1:0,15:15:39.13:565,39,0	0/0:21,0:21:60.19:0,60,777	0/0:27,0:27:78.25:0,78,1013	0/0:32,0:32:93.29:0,93,1193	0/0:16,0:16:48.16:0,48,623
chr10	75616397	.	T	TA	1795.87	PASS	AB=0.872;AC=15;AF=0.268;AN=56;BaseQRankSum=-4.078;DP=588;FS=2.626;HRun=13;HaplotypeScore=70.0263;InbreedingCoeff=0.6713;MQ=74.65;MQ0=1;MQRankSum=2.862;QD=8.89;ReadPosRankSum=0.170;VQSLOD=2.9344;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,28:32:30.47:425,30,0	0/0:7,0:7:11.84:0,12,82	0/1:23,1:16:6.85:7,0,63	0/1:19,0:14:24.71:25,0,38	0/0:24,0:24:16.31:0,16,205	0/0:16,1:17:29.56:0,30,202	0/0:11,0:12:31.79:0,32,211	0/0:31,1:33:27.17:0,27,315	1/1:9,11:20:6.31:184,6,0	0/0:17,0:17:29.67:0,30,202	0/0:14,0:14:26.70:0,27,185	1/1:8,15:25:32.71:277,33,0	1/1:1,13:15:9.25:223,9,0	0/0:15,2:17:10.48:0,10,164	0/0:22,0:22:41.33:0,41,277	0/0:12,0:13:22.67:0,23,147	0/0:37,0:37:76.56:0,77,528	0/0:19,1:20:19.65:0,20,273	0/0:17,0:18:28.73:0,29,191	0/0:24,1:26:18.49:0,18,256	0/0:9,1:13:0.95:0,1,140	0/1:10,10:23:6.23:230,0,6	1/1:7,14:22:14.53:239,15,0	1/1:5,17:22:24.47:369,24,0	0/0:25,0:25:59.25:0,59,401	0/0:20,2:22:13.16:0,13,228	0/0:26,0:28:46.40:0,46,307	0/0:21,0:21:24.87:0,25,212
chr10	75621938	.	G	GA	523.65	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-0.461;DP=581;FS=3.892;HRun=9;HaplotypeScore=64.3766;InbreedingCoeff=0.6353;MQ=77.95;MQ0=0;MQRankSum=-1.018;QD=10.47;ReadPosRankSum=0.364;VQSLOD=2.5265;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,24:33:56.99:611,57,0	0/0:15,0:15:35.75:0,36,291	0/1:17,0:14:17.66:18,0,54	0/0:19,0:16:15.68:0,16,87	0/0:25,0:25:56.93:0,57,483	0/0:23,0:23:62.96:0,63,543	0/0:13,0:13:38.98:0,39,335	0/0:24,0:24:56.92:0,57,479	0/0:27,0:27:62.86:0,63,530	0/0:36,0:36:77.88:0,78,658	0/0:12,0:12:35.99:0,36,312	0/0:20,0:20:50.97:0,51,437	0/0:24,0:24:68.93:0,69,589	0/0:18,0:18:41.97:0,42,361	0/0:13,0:13:29.96:0,30,256	0/0:15,0:15:35.94:0,36,302	0/0:10,0:10:20.99:0,21,182	0/0:16,0:16:44.99:0,45,391	0/0:29,0:29:59.77:0,60,499	0/0:25,0:25:68.89:0,69,581	0/0:14,0:14:35.99:0,36,312	0/0:21,0:21:56.97:0,57,492	0/0:26,0:26:43.64:0,44,403	0/0:9,0:9:14.99:0,15,130	0/0:24,0:24:56.94:0,57,485	0/0:36,0:36:98.26:0,98,824	0/0:25,0:25:65.92:0,66,561	0/0:12,0:12:26.97:0,27,234
chr10	75622100	.	T	TTG	4539.85	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-4.642;DP=880;FS=8.813;HRun=0;HaplotypeScore=134.4231;InbreedingCoeff=0.9898;MQ=57.16;MQ0=16;MQRankSum=0.697;QD=24.67;ReadPosRankSum=1.729;VQSLOD=5.8471;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:43:65.21:0,65,697	0/0:7,0:7:15.05:0,15,181	0/0:31,0:9:15.34:0,15,126	0/0:41,0:15:20.50:0,20,190	0/0:17,0:17:35.24:0,35,452	0/0:25,0:25:57.12:0,57,660	0/0:21,0:20:47.98:0,48,556	0/0:42,0:42:72.15:0,72,822	1/1:19,15:33:52.05:899,52,0	0/0:41,0:40:93.26:0,93,1096	0/0:23,0:23:51.15:0,51,613	1/1:22,15:34:32.94:891,33,0	1/1:6,23:31:30.18:706,30,0	0/0:37,0:36:84.23:0,84,981	0/0:27,0:27:54.02:0,54,618	0/0:24,0:23:60.13:0,60,676	0/0:29,0:29:71.38:0,71,793	0/0:33,0:32:74.69:0,75,806	0/0:32,0:29:48.67:0,49,541	0/0:21,0:21:36.09:0,36,412	0/0:109,0:111:99:0,210,2546	1/1:2,21:23:36.04:578,36,0	1/1:14,8:22:26.08:542,26,0	1/1:11,23:34:59.02:925,59,0	0/0:23,0:23:20.58:0,21,508	0/0:25,0:25:59.93:0,60,665	0/0:27,0:27:63.19:0,63,746	0/0:10,0:10:18.06:0,18,217
chr10	75622179	.	CTG	C	72.73	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.697;DP=874;FS=9.788;HRun=0;HaplotypeScore=160.0675;InbreedingCoeff=0.8245;MQ=52.75;MQ0=27;MQRankSum=-0.424;QD=1.97;ReadPosRankSum=-1.536;VQSLOD=1.8248;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,17:32:16:162,16,0	0/0:6,0:6:15.05:0,15,251	0/0:20,0:3:5.92:0,6,87	0/0:23,0:5:9:0,9,104	0/0:25,0:25:66.18:0,66,995	0/0:24,0:24:58.42:0,58,911	0/0:28,0:23:54.18:0,54,891	0/0:41,0:36:44.46:0,44,1274	0/0:33,0:32:82.45:0,82,1262	0/0:30,0:27:25.08:0,25,932	0/0:22,0:22:57.18:0,57,908	0/0:38,0:37:90.20:0,90,1428	0/0:35,0:34:77.94:0,78,1200	0/0:32,0:32:75.15:0,75,1123	0/0:25,0:25:60.39:0,60,982	0/0:19,0:19:45.15:0,45,739	0/0:35,1:36:16.81:0,17,1302	0/0:40,0:39:81.22:0,81,1265	0/0:28,0:21:41.77:0,42,614	0/0:14,0:14:39.13:0,39,644	0/0:117,1:115:99:0,260,4227	0/0:20,0:20:54.16:0,54,853	0/0:30,0:27:66.17:0,66,1065	0/0:50,0:50:90.27:0,90,1498	0/0:33,0:33:72.23:0,72,1160	0/0:34,1:33:43.05:0,43,1190	0/0:20,0:20:51.13:0,51,783	0/0:12,0:12:36.12:0,36,591
chr10	75622235	.	GT	G	1883.41	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.477;DP=921;FS=1.830;HRun=1;HaplotypeScore=157.1666;InbreedingCoeff=0.9369;MQ=47.35;MQ0=86;MQRankSum=0.132;QD=9.91;ReadPosRankSum=2.747;VQSLOD=1.7792;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:48:33.60:0,34,525	0/0:13,0:12:36.12:0,36,560	0/0:15,1:1:3.01:0,3,48	0/0:18,0:3:6.02:0,6,95	0/0:21,0:21:60.20:0,60,943	0/0:22,0:19:42.07:0,42,634	0/0:39,0:29:74.33:0,74,1121	0/0:51,0:33:96.27:0,96,1445	1/1:10,22:27:55.83:464,56,0	0/0:38,0:31:78.74:0,79,1239	0/0:17,0:16:42.14:0,42,671	1/1:6,22:25:51.38:448,51,0	1/1:13,21:29:11.65:353,12,0	0/0:34,0:29:78.22:0,78,1204	0/0:37,0:35:99:0,99,1558	0/0:22,0:20:46.33:0,46,746	0/0:24,1:24:63.13:0,63,929	0/0:40,0:39:99:0,100,1605	0/0:29,0:17:45.15:0,45,690	0/0:22,0:20:51.17:0,51,811	0/0:117,0:103:99:0,227,3466	1/1:5,12:16:20.31:178,20,0	1/1:8,16:22:24.41:245,24,0	1/1:28,26:53:53.80:380,54,0	0/0:24,0:21:48.50:0,49,807	0/0:46,0:36:99:0,105,1610	0/0:28,0:26:69.15:0,69,1099	0/0:15,0:13:36.11:0,36,561
chr10	75622237	.	AT	A	1832.07	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.595;DP=914;FS=2.411;HRun=1;HaplotypeScore=157.6579;InbreedingCoeff=0.9389;MQ=47.36;MQ0=88;MQRankSum=1.205;QD=9.75;ReadPosRankSum=2.364;VQSLOD=1.7547;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:48:36.61:0,37,562	0/0:13,0:12:36.12:0,36,553	0/0:12,0:1:3.01:0,3,47	0/0:14,0:2:6.02:0,6,88	0/0:21,0:21:60.19:0,60,921	0/0:23,0:20:45.14:0,45,683	0/0:39,0:29:74.38:0,74,1119	0/0:49,0:30:87.29:0,87,1326	1/1:10,22:27:55.68:463,56,0	0/0:39,0:33:84.74:0,85,1274	0/0:18,0:17:42.14:0,42,657	1/1:7,22:25:54.33:470,54,0	1/1:11,22:28:14.58:342,15,0	0/0:34,0:29:75.26:0,75,1192	0/0:37,0:35:99:0,99,1546	0/0:21,0:19:36.04:0,36,668	0/0:25,1:25:60.19:0,60,924	0/0:40,0:39:99:0,100,1588	0/0:31,0:18:48.12:0,48,731	0/0:22,0:20:51.17:0,51,804	0/0:114,0:101:99:0,224,3406	1/1:4,12:15:17.22:152,17,0	1/1:8,16:22:22.44:238,22,0	1/1:28,26:52:49.53:353,50,0	0/0:24,0:21:48.44:0,48,727	0/0:46,0:35:99:0,102,1604	0/0:29,0:27:72.15:0,72,1112	0/0:15,0:13:36.09:0,36,537
chr10	75622270	.	AGTGT	A	1389.77	PASS	AB=0.800;AC=12;AF=0.214;AN=56;BaseQRankSum=6.257;DP=813;FS=10.017;HRun=0;HaplotypeScore=163.0219;InbreedingCoeff=0.7370;MQ=51.38;MQ0=63;MQRankSum=-3.375;QD=7.47;ReadPosRankSum=-1.684;VQSLOD=1.8591;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:51:27.74:0,28,1070	0/0:9,0:11:29.57:0,30,555	0/0:17,0:1:0.89:0,1,2	0/0:21,0:9:14.11:0,14,104	0/0:13,0:14:23.82:0,24,489	0/0:24,0:22:32.82:0,33,619	0/0:31,0:23:47.82:0,48,872	0/0:39,0:29:55.87:0,56,982	1/1:12,16:26:27.07:397,27,0	0/0:35,0:32:65.79:0,66,1382	0/0:9,0:9:21.07:0,21,489	1/1:20,11:27:20.99:344,21,0	1/1:13,7:17:7.23:315,7,0	0/0:28,0:26:50.89:0,51,1122	0/0:30,1:31:41.81:0,42,862	0/1:24,0:23:1.70:2,0,860	0/0:20,1:21:38.72:0,39,870	0/0:38,0:43:77.79:0,78,1540	0/0:24,0:15:32.85:0,33,679	0/0:19,1:24:53.12:0,53,994	0/0:91,0:85:95.08:0,95,2120	1/1:11,4:15:14.65:168,15,0	1/1:10,12:21:6:98,6,0	0/1:19,24:42:3.09:229,0,3	0/0:15,0:16:22.80:0,23,553	0/0:33,1:30:7.58:0,8,935	0/0:22,1:24:1.66:0,2,962	0/0:10,0:9:21.07:0,21,491
chr10	75623640	.	C	CT	575.96	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.582;DP=625;FS=2.888;HRun=9;HaplotypeScore=58.1663;InbreedingCoeff=0.9162;MQ=69.20;MQ0=0;MQRankSum=-1.164;QD=17.45;ReadPosRankSum=1.217;VQSLOD=3.8718;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:33:40.12:671,40,0	0/0:15,0:15:41.99:0,42,365	0/0:22,0:22:32.97:0,33,280	0/0:8,0:8:12:0,12,104	0/0:34,0:34:95.98:0,96,833	0/0:27,1:29:43.82:0,44,594	0/0:11,0:11:29.97:0,30,256	0/0:27,0:27:59.97:0,60,518	0/0:18,0:18:47.99:0,48,417	0/0:21,0:22:55.97:0,56,475	0/0:13,0:13:29.98:0,30,259	0/0:16,0:16:44.99:0,45,390	0/0:28,0:28:65.97:0,66,573	0/0:18,0:20:52.06:0,52,429	0/0:21,0:21:38.95:0,39,339	0/0:20,0:20:50.99:0,51,443	0/0:25,0:25:74.97:0,75,648	0/0:18,0:18:50.99:0,51,443	0/0:11,0:11:32.99:0,33,286	0/0:36,0:35:89.97:0,90,781	0/0:17,0:17:38.98:0,39,339	0/0:25,0:25:68.98:0,69,599	0/0:35,0:35:86.87:0,87,739	0/0:24,0:24:56.98:0,57,495	0/0:23,0:23:65.98:0,66,573	0/0:41,0:41:99:0,111,963	0/0:28,0:27:62.96:0,63,547	0/0:5,0:5:8.98:0,9,78
chr10	75625706	.	CACACACACACG	C	326.73	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=4.915;DP=870;FS=7.569;HRun=0;HaplotypeScore=261.0084;InbreedingCoeff=0.3832;MQ=52.93;MQ0=27;MQRankSum=-4.372;QD=2.53;ReadPosRankSum=-0.345;VQSLOD=1.5270;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,18:31:17.28:408,17,0	0/0:8,0:8:21.07:0,21,919	0/0:41,0:9:2.83:0,3,220	0/1:50,0:11:17.87:18,0,342	0/0:23,0:23:57.19:0,57,1998	0/0:25,0:22:54.18:0,54,2156	0/0:38,0:36:86.76:0,87,2343	0/0:20,0:17:36.56:0,37,781	0/0:29,0:28:44.27:0,44,1163	0/0:36,0:36:69.53:0,70,3215	0/0:14,0:13:24.08:0,24,1008	0/0:38,0:33:34.93:0,35,772	0/0:19,0:18:34.36:0,34,913	0/0:43,0:39:99:0,99,3322	0/0:12,0:12:30.10:0,30,1061	0/0:16,0:16:6.63:0,7,1038	0/0:37,0:36:69.09:0,69,2820	0/0:33,0:32:78.27:0,78,3129	0/0:20,0:19:39.12:0,39,1423	0/0:11,0:11:33.11:0,33,1030	0/0:137,0:126:99:0,273,10123	0/0:21,0:21:14.52:0,15,283	0/0:23,0:23:11.25:0,11,280	0/1:45,0:43:10.20:10,0,403	0/0:27,0:27:60.21:0,60,2206	0/0:41,0:37:90.24:0,90,2670	0/0:14,0:13:36.12:0,36,1355	0/0:8,0:8:18.06:0,18,808
chr10	75625744	.	C	CACGA	1885.39	PASS	AB=0.586;AC=10;AF=0.179;AN=56;BaseQRankSum=4.747;DP=961;FS=12.823;HRun=0;HaplotypeScore=171.7570;InbreedingCoeff=0.8601;MQ=46.20;MQ0=73;MQRankSum=-6.362;QD=11.22;ReadPosRankSum=1.141;VQSLOD=2.2540;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:29:21.10:0,21,266	0/0:13,0:13:36.11:0,36,667	0/0:49,0:6:15.05:0,15,246	0/0:63,0:10:19.08:0,19,287	0/0:26,0:19:51.12:0,51,937	0/0:29,0:27:81.28:0,81,1646	0/0:37,0:35:92.48:0,92,1714	0/0:28,0:24:54.17:0,54,881	1/1:8,16:29:40.95:972,41,0	0/0:41,0:36:99:0,101,1827	0/0:20,0:17:33.11:0,33,661	1/1:16,15:30:15.52:376,16,0	1/1:4,8:18:26.96:597,27,0	0/0:40,0:32:87.23:0,87,1623	0/0:16,0:14:30.10:0,30,582	0/0:15,0:15:35.80:0,36,590	0/0:36,0:32:75.59:0,76,1473	0/0:36,0:36:99:0,100,2006	0/0:38,0:25:28.38:0,28,927	0/0:9,0:9:27.09:0,27,508	0/0:171,0:156:99:0,367,7026	0/1:6,14:21:0.18:1,0,0	1/1:9,9:21:2.90:87,3,0	0/1:11,22:31:0.05:0,0,0	0/0:21,0:20:54.14:0,54,1050	0/0:34,0:25:69.23:0,69,1335	0/0:15,0:12:36.12:0,36,619	0/0:16,0:12:30.10:0,30,586
chr10	75625795	.	GCA	G	146.96	PASS	AB=0.955;AC=4;AF=0.077;AN=52;BaseQRankSum=6.121;DP=856;FS=6.055;HRun=0;HaplotypeScore=104.9169;InbreedingCoeff=0.3919;MQ=45.69;MQ0=63;MQRankSum=0.180;QD=3.06;ReadPosRankSum=-0.312;VQSLOD=1.9143;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,15:21:0.47:217,0,0	0/0:14,0:13:33.10:0,33,506	0/0:71,0:7:7.61:0,8,134	0/0:82,1:1:3.01:0,3,50	0/0:8,0:8:6.02:0,6,100	0/0:32,1:28:17.32:0,17,871	0/0:45,0:43:96.28:0,96,1500	0/0:29,0:23:47.08:0,47,618	0/1:11,0:10:0.67:1,0,1	0/0:32,0:29:64.61:0,65,990	0/0:12,0:11:30.10:0,30,489	0/0:16,0:11:0:0,0,0	0/0:10,0:6:2.60:0,3,10	0/0:35,0:29:69.21:0,69,1113	0/1:9,1:9:14.12:14,0,302	0/0:14,0:13:30.09:0,30,453	0/0:26,0:25:54.17:0,54,865	0/0:42,0:38:76.15:0,76,1385	0/0:36,0:19:30.90:0,31,558	0/0:12,0:10:24.08:0,24,391	0/0:170,4:161:99:0,185,5554	./.	0/0:12,0:9:0:0,0,0	./.	0/0:18,0:17:39.07:0,39,576	0/0:34,0:29:37.62:0,38,1078	0/0:8,0:7:21.06:0,21,322	0/0:13,0:10:18.03:0,18,244
chr10	75625843	.	GCGCGC	G	32.77	PASS	AB=0.900;AC=6;AF=0.120;AN=50;BaseQRankSum=4.197;DP=668;FS=1.604;HRun=0;HaplotypeScore=126.5864;InbreedingCoeff=0.6845;MQ=53.33;MQ0=13;MQRankSum=-4.053;QD=1.64;ReadPosRankSum=-2.401;VQSLOD=1.4238;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:8:6.30:6,0,8	0/0:16,0:16:45.13:0,45,1334	0/0:40,0:8:18.06:0,18,436	0/0:59,0:11:17.36:0,17,430	0/0:19,0:19:54.19:0,54,1700	0/0:19,0:19:57.18:0,57,1634	0/0:37,0:36:99:0,102,3021	0/0:11,0:11:31.35:0,31,860	1/1:3,2:5:8.99:111,9,0	0/0:26,0:26:72.23:0,72,2126	0/0:10,0:10:27.09:0,27,855	./.	1/1:3,0:3:2.88:15,3,0	0/0:35,0:35:96.31:0,96,2855	0/0:10,0:9:27.09:0,27,873	0/0:14,0:14:30.10:0,30,813	0/0:35,0:35:99:0,102,3176	0/0:27,0:27:78.27:0,78,2398	0/0:23,0:19:54.15:0,54,1427	0/0:16,0:16:42.14:0,42,1331	0/0:178,0:178:99:0,490,15129	./.	./.	0/1:3,1:3:0:1,0,0	0/0:17,0:17:48.16:0,48,1590	0/0:29,0:29:84.29:0,84,2605	0/0:13,0:13:39.13:0,39,1266	0/0:9,0:9:27.09:0,27,850
chr10	75625869	.	AGCG	A	474.36	PASS	AB=0.917;AC=11;AF=0.204;AN=54;BaseQRankSum=7.551;DP=781;FS=38.695;HRun=0;HaplotypeScore=120.4629;InbreedingCoeff=0.7735;MQ=52.00;MQ0=31;MQRankSum=-6.779;QD=10.09;ReadPosRankSum=-3.548;VQSLOD=1.0833;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:10:31.98:52,0,32	0/0:13,0:13:39.13:0,39,919	0/0:73,0:16:44.79:0,45,864	0/0:64,3:12:27.01:0,27,523	0/0:26,0:26:72.24:0,72,1718	0/0:17,1:18:52.05:0,52,1141	0/0:38,0:38:99:0,105,2390	0/0:19,0:19:51.04:0,51,1168	1/1:1,7:9:20.97:243,21,0	0/0:33,0:32:90.78:0,91,2132	0/0:14,0:15:33.09:0,33,723	1/1:1,9:9:11.28:158,11,0	1/1:1,3:5:8.88:100,9,0	0/0:34,0:32:93.10:0,93,2179	0/0:13,0:14:39.13:0,39,928	0/0:10,1:11:23.67:0,24,541	0/0:42,0:41:99:0,117,2825	0/0:25,0:24:69.24:0,69,1674	0/0:26,0:23:66.22:0,66,1485	0/0:16,0:16:45.15:0,45,1047	0/0:172,3:174:99:0,473,10652	./.	1/1:0,5:5:3:28,3,0	1/1:2,5:5:3.01:48,3,0	0/0:25,0:25:72.23:0,72,1645	0/0:28,0:29:82.56:0,83,1737	0/0:14,0:13:42.14:0,42,1012	0/0:9,0:9:27.09:0,27,660
chr10	75625872	.	GCA	G	33.15	PASS	AB=0.938;AC=7;AF=0.130;AN=54;BaseQRankSum=5.934;DP=795;FS=2.476;HRun=0;HaplotypeScore=109.3626;InbreedingCoeff=0.0674;MQ=51.78;MQ0=36;MQRankSum=1.033;QD=0.27;ReadPosRankSum=-0.500;VQSLOD=2.0947;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:11:23.22:0,23,169	0/0:12,0:12:30.10:0,30,491	0/0:78,0:17:35.39:0,35,421	0/0:68,2:12:17.64:0,18,248	0/0:27,1:28:38.04:0,38,1117	0/1:17,2:19:31.81:32,0,524	0/1:37,2:39:12.40:12,0,1338	0/0:19,1:20:15.77:0,16,725	0/0:10,0:9:2.78:0,3,41	0/0:34,0:32:78.24:0,78,1232	0/1:14,0:14:7.27:7,0,341	1/1:10,0:9:3.50:11,3,0	0/0:7,0:7:2.18:0,2,53	0/0:33,1:32:47.08:0,47,1264	0/0:14,0:14:30.10:0,30,492	0/1:11,1:12:10.47:10,0,342	0/0:43,0:42:99:0,108,1689	0/0:26,0:25:69.20:0,69,1083	0/0:30,1:24:10.92:0,11,609	0/0:15,0:15:33.11:0,33,536	0/0:159,11:168:99:0,103,5675	./.	0/0:5,0:5:1.55:0,2,4	0/0:9,0:6:4.58:0,5,25	0/0:24,1:25:20.01:0,20,824	0/1:28,3:30:76.15:76,0,741	0/0:14,0:13:42.14:0,42,679	0/0:9,0:9:27.09:0,27,441
chr10	75625876	.	A	AC	498.63	PASS	AB=0.875;AC=9;AF=0.167;AN=54;BaseQRankSum=6.862;DP=824;FS=10.634;HRun=1;HaplotypeScore=106.8282;InbreedingCoeff=0.7995;MQ=51.54;MQ0=34;MQRankSum=-4.620;QD=10.39;ReadPosRankSum=-3.989;VQSLOD=-0.3112;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:23.52:0,24,222	0/0:11,0:11:30.10:0,30,389	0/0:83,0:19:47.89:0,48,593	0/0:74,0:14:32.10:0,32,365	0/0:29,0:29:75.03:0,75,947	0/0:21,0:21:60.20:0,60,691	0/0:39,0:39:99:0,102,1245	0/0:23,0:23:56.12:0,56,707	1/1:10,1:10:23.90:258,24,0	0/0:36,0:34:93.74:0,94,1187	0/0:15,0:14:29.99:0,30,359	1/1:9,3:11:14.71:145,15,0	0/1:6,1:7:27.80:106,0,28	0/0:36,0:34:95.89:0,96,1193	0/0:14,0:14:36.12:0,36,466	0/0:12,0:12:26.88:0,27,324	0/0:43,0:42:99:0,117,1515	0/0:26,0:25:41.80:0,42,865	0/0:29,0:22:59.98:0,60,748	0/0:16,0:16:42.12:0,42,524	0/0:172,0:170:99:0,452,5640	./.	1/1:6,0:6:2.92:17,3,0	1/1:11,1:9:11.68:123,12,0	0/0:24,0:24:66:0,66,828	0/0:30,0:29:80.35:0,80,951	0/0:14,0:13:42.14:0,42,544	0/0:10,0:10:27.09:0,27,351
chr10	75628125	.	AGT	A	184.30	PASS	AB=0.923;AC=19;AF=0.396;AN=48;BaseQRankSum=4.892;DP=516;FS=9.467;HRun=0;HaplotypeScore=73.8043;InbreedingCoeff=-0.1152;MQ=62.91;MQ0=17;MQRankSum=0.502;QD=0.66;ReadPosRankSum=1.740;VQSLOD=0.1467;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:25:5.05:5,0,34	./.	./.	./.	0/1:13,0:13:2.10:2,0,112	0/1:19,0:18:15.35:15,0,149	0/0:15,0:14:14.53:0,15,160	0/0:29,0:29:7.66:0,8,46	1/1:11,0:10:3.27:15,3,0	0/0:12,0:12:8.91:0,9,82	0/0:19,0:19:11.25:0,11,139	1/1:15,0:16:5.29:19,5,0	1/1:12,0:12:0.17:2,0,0	0/1:16,0:16:8.43:8,0,150	0/1:16,4:20:44.20:44,0,176	0/1:15,4:18:38.21:38,0,234	0/0:12,0:15:15.04:0,15,205	0/1:14,9:22:91.18:91,0,104	1/1:9,0:9:0.94:8,1,0	0/0:20,0:23:12:0,12,137	0/1:29,0:29:8.63:9,0,234	./.	0/0:9,0:13:0:0,0,0	0/0:19,0:21:1.68:0,2,4	0/0:12,0:11:6.02:0,6,82	0/1:26,1:27:32.01:32,0,212	0/1:18,0:16:19.95:20,0,204	0/1:21,0:20:8.52:9,0,84
chr10	75628397	.	AAC	A	406.59	PASS	AB=0.914;AC=21;AF=0.420;AN=50;BaseQRankSum=0.701;DP=548;FS=28.979;HRun=0;HaplotypeScore=74.0747;InbreedingCoeff=0.0509;MQ=68.79;MQ0=19;MQRankSum=-0.281;QD=1.63;ReadPosRankSum=-2.013;VQSLOD=-0.1980;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:35:11.06:0,11,331	./.	./.	./.	0/1:15,4:19:5.31:5,0,70	0/1:15,0:15:18.79:19,0,118	0/1:24,0:23:33.10:33,0,158	0/0:25,0:24:0:0,0,0	1/1:2,7:9:3.01:32,3,0	0/1:15,2:17:21.96:22,0,66	0/0:16,0:16:9.01:0,9,112	1/1:10,5:15:3:32,3,0	1/1:9,0:9:9:77,9,0	0/1:11,3:14:20.22:20,0,121	0/1:16,0:16:65.42:65,0,155	0/1:11,3:13:46.62:47,0,113	0/1:33,0:33:30.25:30,0,218	0/1:13,2:14:20.22:20,0,121	0/0:11,0:11:8.99:0,9,92	0/0:15,0:13:8.89:0,9,78	0/0:31,0:40:18:0,18,187	1/1:11,0:9:2.97:20,3,0	1/1:8,0:8:3.47:26,3,0	1/1:17,11:28:11.86:111,12,0	0/0:7,0:7:3.01:0,3,44	0/0:20,0:20:15:0,15,178	0/0:9,0:17:11.97:0,12,99	0/0:7,0:8:5.99:0,6,50
chr10	75629128	.	TGTCGTA	T	5688.81	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.449;DP=689;FS=3.968;HRun=0;HaplotypeScore=141.2521;InbreedingCoeff=0.9959;MQ=86.25;MQ0=0;MQRankSum=-14.247;QD=56.89;ReadPosRankSum=2.134;VQSLOD=5.0135;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,148,5233	0/0:7,0:7:21.05:0,21,668	0/0:26,0:26:78.27:0,78,2502	0/0:22,0:22:66.23:0,66,2090	0/0:22,0:22:66.21:0,66,2295	0/0:27,0:27:78.27:0,78,2696	0/0:16,0:16:48.16:0,48,1730	0/0:32,0:32:93.32:0,93,3193	1/1:0,18:18:45.15:1080,45,0	0/0:33,0:33:99:0,99,3323	0/0:17,0:17:45.15:0,45,1545	1/1:2,12:14:36.12:864,36,0	1/1:0,17:17:42.14:1008,42,0	0/0:26,0:26:75.24:0,75,2409	0/0:19,0:19:51.16:0,51,1726	0/0:24,0:23:69.24:0,69,2431	0/0:40,0:40:99:0,120,4049	0/0:15,0:15:45.15:0,45,1608	0/0:27,0:27:75.24:0,75,2478	0/0:26,0:26:72.23:0,72,2440	0/0:34,0:34:99:0,102,3591	1/1:2,18:20:48.16:1152,48,0	1/1:0,19:19:51.18:1224,51,0	1/1:0,12:12:15.05:360,15,0	0/0:27,0:27:81.28:0,81,2892	0/0:44,0:44:99:0,129,4593	0/0:30,0:30:84.29:0,84,2969	0/0:26,0:26:78.27:0,78,2761
chr10	75629501	.	C	CA	2334.56	PASS	AB=0.581;AC=13;AF=0.232;AN=56;BaseQRankSum=-2.816;DP=610;FS=4.293;HRun=10;HaplotypeScore=66.9206;InbreedingCoeff=0.7915;MQ=59.12;MQ0=17;MQRankSum=1.337;QD=14.97;ReadPosRankSum=0.890;VQSLOD=4.0191;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:40:45.69:271,46,0	0/0:8,0:8:17.96:0,18,145	0/0:18,0:7:15.73:0,16,108	0/0:19,0:7:9.32:0,9,85	0/0:26,0:26:71.89:0,72,588	0/0:15,0:15:38.95:0,39,320	0/0:15,0:15:32.92:0,33,270	0/0:24,1:25:21.94:0,22,387	1/1:5,11:16:5.54:263,6,0	0/0:12,0:12:26.95:0,27,222	0/0:9,0:10:19.99:0,20,153	0/1:5,13:17:13.20:284,0,13	1/1:2,14:16:36.07:375,36,0	0/0:20,0:20:50.93:0,51,418	0/0:16,1:17:12.94:0,13,313	0/0:20,0:20:53.93:0,54,443	0/0:48,0:47:92.72:0,93,859	0/0:38,1:40:56.84:0,57,655	0/0:25,2:27:4.04:0,4,430	0/0:24,0:25:59.90:0,60,491	0/0:18,0:18:35.90:0,36,292	1/1:6,16:22:31.80:523,32,0	1/1:4,14:18:2.42:231,2,0	1/1:3,22:26:35.34:563,35,0	0/0:17,0:18:49.98:0,50,400	0/0:26,0:26:33.34:0,33,424	0/0:29,0:28:62.90:0,63,517	0/0:16,0:16:13.15:0,13,313
chr10	75632006	.	CA	C	2289.35	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.235;DP=517;FS=1.333;HRun=10;HaplotypeScore=53.1832;InbreedingCoeff=0.9484;MQ=76.70;MQ0=0;MQRankSum=-0.959;QD=21.00;ReadPosRankSum=3.404;VQSLOD=4.5355;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:89.98:781,90,0	0/0:10,0:10:30.08:0,30,332	0/0:15,0:15:20.97:0,21,212	0/0:13,0:12:19.18:0,19,182	0/0:23,0:23:69.16:0,69,744	0/0:15,0:15:36.10:0,36,398	0/0:13,0:13:39.09:0,39,423	0/0:31,0:31:84.02:0,84,874	1/1:0,11:11:32.99:287,33,0	0/0:13,2:15:13.05:0,13,372	0/0:25,1:26:49.15:0,49,770	1/1:1,12:13:32.99:286,33,0	1/1:4,14:18:41.98:365,42,0	0/0:14,1:15:16.01:0,16,390	0/0:17,0:17:51.14:0,51,561	0/0:21,1:22:37.07:0,37,624	0/0:37,0:37:99:0,105,1161	0/0:14,0:14:39.11:0,39,431	0/0:19,1:20:28.07:0,28,529	0/0:17,0:17:48.12:0,48,524	0/0:13,0:13:36.10:0,36,398	1/1:1,8:9:23.99:208,24,0	1/1:2,17:19:47.98:417,48,0	1/1:1,6:7:1.17:136,1,0	0/0:19,0:19:51.12:0,51,554	0/0:28,0:29:84.06:0,84,910	0/0:26,0:26:69.13:0,69,742	0/0:17,0:18:47.96:0,48,510
chr10	75632339	.	G	GA	420.41	PASS	AB=0.938;AC=3;AF=0.054;AN=56;BaseQRankSum=-5.079;DP=504;FS=3.893;HRun=12;HaplotypeScore=57.6581;InbreedingCoeff=0.5226;MQ=68.26;MQ0=1;MQRankSum=-1.315;QD=8.94;ReadPosRankSum=-0.094;VQSLOD=2.4952;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,21:32:19.29:511,19,0	0/0:13,0:13:25.72:0,26,185	0/0:7,0:5:13.93:0,14,89	0/0:7,0:8:13.04:0,13,69	0/0:22,1:24:24.39:0,24,325	0/0:14,2:16:0.62:0,1,168	0/0:19,0:20:40.75:0,41,286	0/0:22,0:25:50.81:0,51,344	0/0:18,0:19:40.75:0,41,290	0/0:17,0:17:35.75:0,36,263	0/0:23,0:23:41.63:0,42,303	0/0:10,0:10:23.84:0,24,173	0/0:7,0:8:16.93:0,17,113	0/0:17,0:17:35.72:0,36,263	0/0:13,0:13:23.84:0,24,173	0/0:11,0:11:23.83:0,24,175	0/0:25,1:27:32.42:0,32,390	0/0:30,0:32:60.65:0,61,424	0/0:18,1:19:4.77:0,5,202	0/1:12,1:15:3.32:3,0,131	0/0:20,1:21:12.53:0,13,255	0/0:15,1:16:29.21:0,29,212	0/0:17,0:17:35.68:0,36,256	0/0:25,0:26:55.66:0,56,400	0/0:12,0:13:25.88:0,26,181	0/0:23,0:22:44.47:0,44,325	0/0:14,0:17:36.88:0,37,252	0/0:13,0:14:22.82:0,23,154
chr10	75632520	.	G	GA	2078.65	PASS	AB=0.729;AC=12;AF=0.214;AN=56;BaseQRankSum=-5.809;DP=544;FS=11.934;HRun=11;HaplotypeScore=57.1310;InbreedingCoeff=0.7618;MQ=68.54;MQ0=0;MQRankSum=1.761;QD=18.40;ReadPosRankSum=1.122;VQSLOD=4.0684;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,2:51:53.85:0,54,772	0/0:10,0:10:20.90:0,21,162	0/0:12,0:11:8.15:0,8,53	0/0:4,0:4:1.55:0,2,4	0/0:19,1:21:16.40:0,16,300	0/0:3,0:15:22.39:0,22,65	0/0:5,0:23:32.58:0,33,94	0/0:21,1:22:32.30:0,32,434	1/1:4,14:19:44.92:439,45,0	0/0:29,1:30:41.26:0,41,503	0/1:10,1:11:0.56:1,0,179	1/1:2,17:19:36.07:365,36,0	1/1:2,13:15:39.06:390,39,0	0/0:22,0:22:56.78:0,57,441	0/0:13,1:14:8.59:0,9,248	0/0:11,0:11:26.87:0,27,209	0/0:36,0:40:99:0,107,784	0/0:31,0:31:80.68:0,81,627	0/0:13,1:15:3.50:0,4,190	0/0:17,0:17:47.80:0,48,369	0/0:19,0:20:40.81:0,41,308	1/1:2,11:14:12.62:280,13,0	0/1:2,11:13:7.26:296,0,7	1/1:4,17:22:44.25:481,44,0	0/0:9,0:9:23.90:0,24,185	0/0:24,0:24:47.78:0,48,371	0/0:25,0:24:53.75:0,54,418	0/0:15,0:15:38.82:0,39,302
chr10	75632689	.	CA	C	4310.84	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=16.330;DP=689;FS=0.706;HRun=8;HaplotypeScore=86.2702;InbreedingCoeff=0.9948;MQ=73.91;MQ0=5;MQRankSum=-0.015;QD=24.77;ReadPosRankSum=4.696;VQSLOD=5.2055;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,45:45:99:1175,123,0	0/0:18,0:18:54.14:0,54,638	0/0:40,0:24:50.19:0,50,494	0/0:29,1:18:13.43:0,13,201	0/0:29,0:29:84.22:0,84,987	0/0:19,1:20:28.20:0,28,623	0/0:21,0:21:60.17:0,60,713	0/0:22,0:21:45.12:0,45,525	1/1:2,17:19:48.08:463,48,0	0/0:26,0:26:69.21:0,69,822	0/0:19,0:19:54.16:0,54,646	1/1:1,26:27:69.10:662,69,0	1/1:2,14:16:42.02:396,42,0	0/0:25,0:25:72.21:0,72,858	0/0:27,0:27:75.22:0,75,894	0/0:12,0:12:30.09:0,30,362	0/0:37,0:37:99:0,111,1308	0/0:28,0:28:68.45:0,68,769	0/0:34,0:33:96.20:0,96,1092	0/0:26,0:26:72.22:0,72,869	0/0:16,0:16:39.11:0,39,458	1/1:2,19:21:57.09:549,57,0	1/1:0,23:23:59.93:579,60,0	1/1:4,19:23:20.88:485,21,0	0/0:18,0:18:45.13:0,45,535	0/0:22,0:22:63.19:0,63,761	0/0:28,0:28:81.23:0,81,956	0/0:15,0:16:41.99:0,42,485
chr10	75634610	.	G	GT	6296.40	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.085;DP=601;FS=1.619;HRun=2;HaplotypeScore=71.4896;InbreedingCoeff=0.9999;MQ=92.97;MQ0=0;MQRankSum=-3.245;QD=39.11;ReadPosRankSum=3.872;VQSLOD=5.3606;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:99:1469,102,0	0/0:10,0:10:30.09:0,30,372	0/0:23,0:23:64.22:0,64,745	0/0:28,0:28:81.25:0,81,991	0/0:31,0:31:87.27:0,87,1078	0/0:19,0:19:57.18:0,57,707	0/0:18,0:18:45.14:0,45,558	0/0:26,0:26:75.23:0,75,920	1/1:1,24:25:66.22:951,66,0	0/0:17,0:17:48.10:0,48,568	0/0:18,0:18:54.17:0,54,669	1/1:1,15:16:42.14:605,42,0	1/1:0,21:22:60.20:861,60,0	0/0:15,0:15:45.14:0,45,558	0/0:19,0:19:54.16:0,54,657	0/0:17,0:17:48.15:0,48,595	0/0:23,0:23:63.20:0,63,780	0/0:25,0:25:69.17:0,69,827	0/0:21,0:21:54.17:0,54,669	0/0:20,0:20:57.18:0,57,706	0/0:28,0:28:78.20:0,78,938	1/1:0,22:22:60.20:864,60,0	1/1:1,17:18:48.07:683,48,0	1/1:0,21:21:60.20:864,60,0	0/0:14,0:14:39.12:0,39,483	0/0:25,0:25:75.23:0,75,919	0/0:30,0:30:84.26:0,84,1039	0/0:13,0:13:39.12:0,39,484
chr10	75634706	.	C	CA	2225.83	PASS	AB=0.581;AC=10;AF=0.185;AN=54;BaseQRankSum=3.799;DP=513;FS=23.894;HRun=10;HaplotypeScore=54.2776;InbreedingCoeff=0.8433;MQ=65.81;MQ0=0;MQRankSum=0.313;QD=23.93;ReadPosRankSum=0.858;VQSLOD=2.4587;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:56.92:0,57,467	0/0:13,0:13:38.96:0,39,320	0/0:8,0:8:11.89:0,12,87	./.	0/0:34,0:34:74.86:0,75,613	0/0:14,0:14:40.99:0,41,326	0/0:13,0:14:37.98:0,38,298	0/0:29,0:30:76.89:0,77,615	0/1:4,14:18:4.09:371,0,4	0/0:25,0:26:70.93:0,71,570	0/0:17,0:17:44.94:0,45,369	1/1:5,6:11:24.06:254,24,0	0/1:6,12:18:0.98:393,0,1	0/0:13,0:13:38.96:0,39,320	0/0:15,0:15:35.94:0,36,296	0/0:14,0:14:29.91:0,30,240	0/0:24,0:24:59.92:0,60,493	0/0:14,0:14:29.96:0,30,246	0/0:19,0:19:46.17:0,46,369	0/0:36,0:37:97.90:0,98,794	0/0:10,0:11:29:0,29,228	1/1:0,12:12:36.09:384,36,0	1/1:0,15:15:45.11:480,45,0	1/1:3,16:19:37.59:511,38,0	0/0:29,0:30:76.94:0,77,622	0/0:22,1:23:21.94:0,22,387	0/0:25,0:25:59.92:0,60,493	0/0:11,0:11:26.95:0,27,222
chr10	75634979	.	A	ATATG	32.62	PASS	AB=0.875;AC=8;AF=0.160;AN=50;BaseQRankSum=3.417;DP=426;FS=2.056;HRun=0;HaplotypeScore=75.3953;InbreedingCoeff=0.7145;MQ=61.93;MQ0=5;MQRankSum=-1.767;QD=0.91;ReadPosRankSum=-2.087;VQSLOD=0.6320;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:4:12.04:0,12,221	0/0:13,0:4:0.47:0,0,1	0/1:17,0:4:0:0,0,0	0/0:28,0:28:81.23:0,81,1395	0/0:18,0:18:51.12:0,51,943	0/0:12,0:12:33.10:0,33,534	0/0:35,0:35:99:0,102,1623	1/1:8,1:9:2.93:20,3,0	0/0:30,0:30:84.26:0,84,1465	0/0:15,0:15:39.12:0,39,693	1/1:2,1:3:2.97:20,3,0	1/1:2,2:4:5.97:99,6,0	0/0:14,0:14:36.11:0,36,636	0/0:6,0:6:18.04:0,18,294	0/0:22,0:22:66.19:0,66,1125	0/0:27,0:27:72.18:0,72,1201	0/0:28,0:27:72.22:0,72,1198	0/0:15,0:15:42.06:0,42,638	0/0:18,0:18:51.17:0,51,908	0/0:18,0:17:48.16:0,48,846	./.	./.	0/1:2,1:3:0:0,0,0	0/0:26,0:25:78.24:0,78,1369	0/0:24,0:24:69.24:0,69,1250	0/0:17,0:17:45.11:0,45,727	0/0:11,0:11:33.10:0,33,572
chr10	75634985	.	ATG	A	241.75	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=6.225;DP=446;FS=26.708;HRun=0;HaplotypeScore=61.7946;InbreedingCoeff=0.7908;MQ=60.37;MQ0=7;MQRankSum=0.566;QD=5.62;ReadPosRankSum=-4.390;VQSLOD=-0.0340;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:4:12.04:0,12,231	1/1:11,0:2:0.47:1,0,0	0/0:19,0:4:0.89:0,1,2	0/0:29,0:29:87.23:0,87,1519	0/0:19,0:19:54.17:0,54,1008	0/0:11,0:11:33.08:0,33,569	0/0:35,0:35:99:0,105,1681	1/1:8,5:13:17.99:169,18,0	0/0:31,0:31:90.29:0,90,1578	0/0:17,0:17:48.11:0,48,782	1/1:2,1:3:3.01:45,3,0	1/1:3,1:4:5.75:56,6,0	0/0:15,0:15:45.09:0,45,729	0/0:8,0:8:24.04:0,24,362	0/0:23,0:23:63.20:0,63,1173	0/0:27,0:27:75.20:0,75,1331	0/0:28,0:27:81.16:0,81,1317	0/0:14,0:14:42.13:0,42,735	0/0:20,0:20:60.15:0,60,1028	0/0:18,0:17:51.16:0,51,946	1/1:2,1:3:5.99:50,6,0	1/1:3,1:4:3:25,3,0	1/1:3,2:5:5.99:48,6,0	0/0:29,0:28:87.23:0,87,1505	0/0:24,0:24:72.22:0,72,1333	0/0:17,0:17:51.14:0,51,888	0/0:11,0:11:30.10:0,30,577
chr10	75635008	.	TAC	T	795.93	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.207;DP=543;FS=41.874;HRun=0;HaplotypeScore=73.4760;InbreedingCoeff=0.8872;MQ=56.51;MQ0=15;MQRankSum=-0.556;QD=11.54;ReadPosRankSum=-2.465;VQSLOD=0.7826;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:14:2.83:14,3,0	0/0:6,0:6:15.05:0,15,242	0/0:18,0:6:18.02:0,18,248	0/0:21,0:1:0.89:0,1,2	0/0:29,0:29:66.22:0,66,1051	0/0:21,0:21:57.15:0,57,854	0/0:16,0:16:45.14:0,45,698	0/0:40,0:40:93.29:0,93,1417	1/1:1,18:19:27.08:327,27,0	0/0:30,0:30:69.21:0,69,1039	0/0:21,0:21:34.35:0,34,791	1/1:0,7:7:9.03:109,9,0	1/1:1,7:9:17.89:196,18,0	0/0:20,0:20:54.18:0,54,871	0/0:14,0:14:42.13:0,42,653	0/0:24,0:24:54.17:0,54,839	0/0:29,0:29:66.21:0,66,1024	0/0:31,0:31:85.66:0,86,1304	0/0:22,0:18:33.07:0,33,477	0/0:26,0:26:72.23:0,72,1133	0/0:18,0:17:36.12:0,36,580	1/1:0,6:7:9.03:109,9,0	1/1:0,5:5:8.76:109,9,0	1/1:1,6:7:9.03:109,9,0	0/0:32,1:32:56.94:0,57,1398	0/0:26,0:26:69.24:0,69,1111	0/0:19,0:19:51.16:0,51,795	0/0:10,0:10:26.27:0,26,368
chr10	75636412	.	AC	A	4512.20	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.092;DP=665;FS=2.714;HRun=1;HaplotypeScore=71.4338;InbreedingCoeff=0.9974;MQ=76.19;MQ0=0;MQRankSum=-0.744;QD=35.81;ReadPosRankSum=1.659;VQSLOD=5.2909;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,141,1952	0/0:7,0:7:21.01:0,21,264	0/0:27,0:25:66.20:0,66,930	0/0:21,1:21:42.20:0,42,741	0/0:31,0:31:90.17:0,90,1191	0/0:26,0:26:78.21:0,78,1079	0/0:28,0:28:60.50:0,60,1140	0/0:26,0:26:78.22:0,78,1071	1/1:0,16:16:35.92:502,36,0	0/0:23,0:23:66.13:0,66,869	0/0:10,0:10:30.09:0,30,418	1/1:0,33:33:84.28:1173,84,0	1/1:0,19:19:48.16:670,48,0	0/0:21,0:21:63.16:0,63,879	0/0:30,0:30:90.24:0,90,1236	0/0:17,0:17:51.17:0,51,746	0/0:34,0:34:77.04:0,77,1359	0/0:19,0:19:57.18:0,57,811	0/0:23,0:23:69.19:0,69,940	0/0:19,0:19:57.19:0,57,831	0/0:41,0:41:99:0,123,1735	1/1:0,23:23:65.90:785,66,0	1/1:0,12:12:36.12:502,36,0	1/1:0,23:23:63.21:880,63,0	0/0:16,0:16:45.11:0,45,618	0/0:33,0:33:99:0,99,1326	0/0:30,0:28:90.28:0,90,1290	0/0:6,0:6:18.06:0,18,263
chr10	75637419	.	C	CT	672.22	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.034;DP=528;FS=15.507;HRun=9;HaplotypeScore=57.6166;InbreedingCoeff=0.9734;MQ=70.60;MQ0=1;MQRankSum=-0.341;QD=20.37;ReadPosRankSum=1.016;VQSLOD=2.6520;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:33:49.67:767,50,0	0/0:7,0:7:17.99:0,18,156	0/0:21,0:21:35.01:0,35,288	0/0:11,0:11:26.99:0,27,234	0/0:23,0:23:65.99:0,66,573	0/0:7,0:7:17.99:0,18,156	0/0:16,0:16:41.98:0,42,365	0/0:37,0:37:80.96:0,81,703	0/0:19,0:18:38.97:0,39,339	0/0:20,0:20:44.97:0,45,391	0/0:14,0:14:32.99:0,33,286	0/0:22,0:22:59.99:0,60,521	0/0:11,0:11:23.98:0,24,208	0/0:15,0:15:35.99:0,36,312	0/0:18,0:17:50.99:0,51,443	0/0:10,0:10:23.97:0,24,205	0/0:35,0:34:68.91:0,69,620	0/0:20,0:20:50.92:0,51,435	0/0:21,0:20:41.98:0,42,365	0/0:18,0:18:47.98:0,48,417	0/0:24,0:24:62.94:0,63,539	0/0:13,0:13:35.99:0,36,312	0/0:18,0:18:41.98:0,42,364	0/0:21,0:21:48.34:0,48,461	0/0:18,0:18:29.41:0,29,303	0/0:20,0:20:53.99:0,54,469	0/0:16,0:16:35.98:0,36,312	0/0:18,1:19:20.81:0,21,410
chr10	75640286	.	TAC	T	43.35	PASS	AB=0.927;AC=7;AF=0.125;AN=56;BaseQRankSum=5.779;DP=788;FS=7.670;HRun=0;HaplotypeScore=112.1329;InbreedingCoeff=0.0141;MQ=61.19;MQ0=6;MQRankSum=0.465;QD=0.20;ReadPosRankSum=0.005;VQSLOD=1.7689;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:47:5.81:0,6,32	0/0:7,0:7:15.05:0,15,236	0/1:46,1:32:36.21:36,0,165	0/0:38,0:24:21.26:0,21,219	0/0:19,0:20:13.36:0,13,451	0/0:24,0:24:54.14:0,54,777	0/0:33,0:33:72.23:0,72,1092	0/0:22,0:22:36:0,36,463	1/1:26,0:25:2.69:13,3,0	0/0:19,1:20:3.93:0,4,466	0/0:24,1:25:15.45:0,15,623	0/1:30,0:30:14.38:17,0,14	0/0:18,0:18:5.99:0,6,48	0/0:29,1:30:22.92:0,23,929	0/0:29,0:29:51.14:0,51,743	0/0:18,1:19:9.97:0,10,601	0/0:34,1:36:46.05:0,46,1104	0/0:20,0:20:50.99:0,51,691	0/1:16,3:19:16.92:17,0,429	0/1:26,4:32:56.40:56,0,963	0/1:57,5:64:26.02:26,0,1649	0/0:29,0:28:17.98:0,18,154	0/0:6,0:28:0.21:0,0,19	0/0:30,0:30:5.80:0,6,41	0/0:25,1:26:28.05:0,28,902	0/0:34,0:33:50.28:0,50,1062	0/0:32,0:32:51.62:0,52,1197	0/0:3,0:3:9.03:0,9,139
chr10	75640298	.	C	CACACACACACACACACACACAT	2677.13	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=1.433;DP=821;FS=5.925;HRun=0;HaplotypeScore=370.8707;InbreedingCoeff=0.6172;MQ=55.77;MQ0=10;MQRankSum=-3.544;QD=9.11;ReadPosRankSum=-1.451;VQSLOD=1.0482;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:48,0:48:25.14:307,0,25	0/0:7,0:7:15.05:0,15,672	0/0:37,0:18:1.26:0,1,206	0/1:40,0:23:3.11:3,0,251	0/0:19,0:19:33.09:0,33,1400	0/0:24,0:24:54.11:0,54,1697	0/0:37,0:37:81.21:0,81,2604	0/0:22,0:22:45.26:0,45,693	1/1:7,0:26:3.01:248,3,0	0/0:21,0:20:48.05:0,48,1304	0/0:23,0:23:53.27:0,53,1406	1/1:4,0:33:9.03:615,9,0	1/1:5,11:31:8.94:390,9,0	0/0:30,0:30:72.15:0,72,3143	0/0:27,0:27:54.12:0,54,2316	0/0:20,0:20:51.13:0,51,2299	0/0:37,0:37:56.26:0,56,3057	0/1:18,0:18:21.94:22,0,1661	0/0:23,0:21:47.96:0,48,1386	0/0:33,0:33:90.26:0,90,3338	0/0:64,0:64:99:0,151,5016	1/1:30,0:29:21.04:362,21,0	1/1:28,1:29:8.66:74,9,0	1/1:11,12:38:5.03:827,5,0	0/0:25,0:25:66.20:0,66,2803	0/0:37,0:36:92.44:0,92,2929	0/0:35,0:35:99:0,100,3531	0/0:6,0:6:18:0,18,367
chr10	75640533	.	CT	C	2487.79	PASS	AB=0.884;AC=14;AF=0.250;AN=56;BaseQRankSum=8.965;DP=653;FS=2.750;HRun=10;HaplotypeScore=74.4690;InbreedingCoeff=0.8104;MQ=67.98;MQ0=0;MQRankSum=-0.542;QD=15.65;ReadPosRankSum=2.090;VQSLOD=4.2856;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:40:79.38:0,79,454	0/0:6,0:6:18.05:0,18,199	0/1:16,1:17:15.56:16,0,294	0/0:15,0:15:32.92:0,33,350	0/0:30,1:31:49.15:0,49,770	0/0:27,1:29:54.98:0,55,808	0/0:20,0:21:59.95:0,60,619	0/0:29,0:29:72.19:0,72,788	1/1:2,22:24:62.99:547,63,0	0/0:29,1:30:40.12:0,40,671	0/0:28,2:31:31.95:0,32,792	1/1:0,21:21:47.88:417,48,0	1/1:5,21:26:56.87:495,57,0	0/0:24,0:24:63.17:0,63,696	0/0:27,0:27:72.17:0,72,780	0/0:20,0:21:59.97:0,60,628	0/0:22,0:22:63.17:0,63,697	0/0:22,0:22:41.69:0,42,579	0/0:24,1:25:46.13:0,46,729	0/0:26,0:26:72.19:0,72,796	0/1:11,3:14:42.07:42,0,263	1/1:1,14:15:38.94:331,39,0	1/1:2,19:21:50.99:442,51,0	1/1:4,17:21:44.98:391,45,0	0/0:21,0:21:54.15:0,54,597	0/0:28,0:28:75.20:0,75,830	0/0:31,0:31:84.09:0,84,888	0/0:15,0:15:39.09:0,39,423
chr10	75641563	.	TG	T	3702.33	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=16.800;DP=547;FS=4.483;HRun=9;HaplotypeScore=105.9901;InbreedingCoeff=0.9519;MQ=81.76;MQ0=0;MQRankSum=-10.855;QD=21.65;ReadPosRankSum=3.230;VQSLOD=3.7766;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,32:36:81:740,81,0	0/0:4,0:4:9.03:0,9,104	0/0:25,0:25:6.47:0,6,457	0/0:13,0:13:18.05:0,18,203	0/0:17,0:17:41.86:0,42,461	0/0:20,0:20:57.15:0,57,647	0/0:27,0:27:75.20:0,75,847	0/0:30,0:30:63.09:0,63,683	1/1:3,21:24:57.01:521,57,0	0/0:18,0:18:45.11:0,45,503	0/0:9,0:9:24.07:0,24,277	1/1:2,19:21:57.03:521,57,0	1/1:1,22:23:65.91:603,66,0	0/0:17,0:17:45.13:0,45,518	0/0:18,0:19:50.98:0,51,568	0/0:19,0:19:57.17:0,57,656	0/0:22,0:22:66.20:0,66,761	0/0:18,0:18:54.16:0,54,623	0/0:21,0:22:53.99:0,54,603	0/0:14,0:14:42.12:0,42,485	0/0:21,0:21:45.02:0,45,506	1/1:7,19:26:53.99:494,54,0	1/1:3,18:21:48.03:439,48,0	1/1:2,18:20:42.02:384,42,0	0/0:10,0:10:27.08:0,27,311	0/0:26,0:26:66.20:0,66,762	0/0:23,0:23:60.17:0,60,682	0/0:2,0:2:6.02:0,6,69
chr10	75642815	.	GT	G	1687.08	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=9.685;DP=505;FS=4.576;HRun=7;HaplotypeScore=68.0395;InbreedingCoeff=0.8797;MQ=68.17;MQ0=1;MQRankSum=-3.633;QD=18.54;ReadPosRankSum=-0.115;VQSLOD=3.3724;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.17:0,78,943	0/0:10,0:10:27.06:0,27,323	0/0:19,0:14:20.60:0,21,253	0/1:16,0:13:18.67:19,0,125	0/0:21,0:21:57.17:0,57,703	0/0:13,0:13:30.09:0,30,364	0/0:18,0:18:51.15:0,51,629	0/0:33,0:32:87.25:0,87,1069	1/1:4,8:12:26.73:295,27,0	0/0:16,0:16:45.13:0,45,546	0/0:16,0:16:39.12:0,39,490	1/1:2,13:15:41.96:401,42,0	1/1:2,8:10:27.04:267,27,0	0/0:13,0:13:36.12:0,36,453	0/0:13,0:13:30.06:0,30,359	0/0:10,0:10:30.10:0,30,377	0/0:40,0:40:99:0,111,1333	0/0:25,0:25:60.18:0,60,741	0/0:34,0:34:90.26:0,90,1116	0/0:23,0:23:57.16:0,57,692	0/0:18,0:17:48.13:0,48,588	1/1:2,12:14:36.03:351,36,0	1/1:2,14:16:36.03:355,36,0	1/1:1,7:8:20.92:189,21,0	0/0:24,0:24:60.19:0,60,745	0/0:23,0:23:66.20:0,66,819	0/0:13,0:13:39.07:0,39,469	0/0:2,0:2:6.02:0,6,75
chr10	75642849	.	G	GT	2587.93	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=9.670;DP=525;FS=9.108;HRun=6;HaplotypeScore=74.8242;InbreedingCoeff=0.9662;MQ=54.39;MQ0=8;MQRankSum=-3.012;QD=27.24;ReadPosRankSum=1.516;VQSLOD=3.9997;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.18:0,84,890	0/0:9,0:9:27.07:0,27,290	./.	0/0:7,0:3:6:0,6,55	0/0:23,0:22:53.48:0,53,547	0/0:15,0:15:45.11:0,45,483	0/0:17,0:17:45.09:0,45,473	0/0:34,0:30:65.22:0,65,659	1/1:0,13:13:36.12:473,36,0	0/0:21,0:21:54.12:0,54,571	0/0:15,0:15:41.83:0,42,408	1/1:2,12:14:30.10:394,30,0	1/1:1,9:10:24.08:315,24,0	0/0:12,0:12:36.09:0,36,387	0/0:15,0:15:45.11:0,45,477	0/0:16,0:16:39.06:0,39,407	0/0:49,0:49:99:0,99,1372	0/0:25,0:25:60.15:0,60,642	0/0:25,0:23:51.05:0,51,513	0/0:21,0:21:60.15:0,60,638	0/0:14,0:14:36.09:0,36,387	1/1:6,12:18:36.07:452,36,0	1/1:5,18:22:54.16:709,54,0	1/1:2,15:17:33.11:429,33,0	0/0:25,0:25:55.53:0,56,693	0/0:25,0:24:72.18:0,72,768	0/0:19,0:19:45.11:0,45,478	0/0:3,0:3:9.02:0,9,96
chr10	75643507	.	A	AGAG	7329.80	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.533;DP=783;FS=0.378;HRun=0;HaplotypeScore=102.5747;InbreedingCoeff=0.9947;MQ=56.64;MQ0=24;MQRankSum=2.641;QD=35.41;ReadPosRankSum=5.352;VQSLOD=4.9275;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,39:46:74.28:1489,74,0	0/0:8,0:8:21.06:0,21,294	0/0:57,0:11:13.83:0,14,206	0/0:79,0:21:21.84:0,22,416	0/0:21,0:21:57.19:0,57,852	0/0:25,0:25:57.18:0,57,832	0/0:25,0:24:48.16:0,48,709	0/0:26,0:25:57.18:0,57,811	1/1:8,19:28:51.17:1050,51,0	0/0:31,0:31:75.25:0,75,1118	0/0:15,0:15:33.09:0,33,470	1/1:4,21:26:51.18:1066,51,0	1/1:6,22:28:48.16:1005,48,0	0/0:30,0:30:69.23:0,69,1031	0/0:19,0:19:51.16:0,51,740	0/0:21,0:21:57.19:0,57,851	0/0:23,0:23:46.36:0,46,828	0/0:22,0:22:54.15:0,54,770	0/0:15,0:14:36.12:0,36,529	0/0:31,0:31:60.20:0,60,897	0/0:35,0:36:93.31:0,93,1385	1/1:5,20:25:48.16:979,48,0	1/1:6,13:19:39.07:815,39,0	1/1:13,22:35:45.15:926,45,0	0/0:16,0:16:42.13:0,42,605	0/0:32,0:32:75.25:0,75,1114	0/0:33,0:33:93.31:0,93,1389	0/0:10,0:11:30.99:0,31,450
chr10	75643956	.	C	CAT	557.39	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.059;DP=685;FS=11.247;HRun=0;HaplotypeScore=77.8269;InbreedingCoeff=0.9555;MQ=67.13;MQ0=1;MQRankSum=-1.208;QD=23.22;ReadPosRankSum=0.616;VQSLOD=3.8527;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:24:39.13:652,39,0	0/0:12,0:12:33.11:0,33,419	0/0:26,0:23:15.22:0,15,251	0/0:11,0:10:13.59:0,14,141	0/0:30,0:30:81.19:0,81,981	0/0:25,0:25:66.17:0,66,808	0/0:23,0:23:60.13:0,60,707	0/0:39,0:39:87.19:0,87,989	0/0:28,0:28:78.23:0,78,977	0/0:36,0:36:99:0,105,1300	0/0:30,0:30:57.19:0,57,820	0/0:21,0:21:60.15:0,60,723	0/0:24,0:24:66.12:0,66,756	0/0:17,0:17:42.12:0,42,520	0/0:29,0:29:78.19:0,78,936	0/0:18,0:18:45.12:0,45,545	0/0:21,0:21:51.12:0,51,618	0/0:15,0:15:38.78:0,39,452	0/0:20,0:19:45.10:0,45,514	0/0:36,0:36:96.28:0,96,1193	0/0:18,0:18:47.58:0,48,524	0/0:14,0:14:27.05:0,27,315	0/0:29,0:29:78.15:0,78,929	0/0:25,0:26:72:0,72,845	0/0:36,0:36:99:0,102,1244	0/0:35,0:35:90.24:0,90,1084	0/0:34,0:34:87.25:0,87,1079	0/0:8,0:8:18.04:0,18,213
chr10	75645346	.	GACATACAAACATATATACAT	G	7610.43	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=10.962;DP=696;FS=8.914;HRun=0;HaplotypeScore=372.0853;InbreedingCoeff=0.9984;MQ=71.59;MQ0=0;MQRankSum=-10.852;QD=79.28;ReadPosRankSum=0.630;VQSLOD=3.5081;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,9496	0/0:8,0:8:24.08:0,24,1664	0/0:19,0:19:48.14:0,48,2949	0/0:27,0:27:72.22:0,72,4132	0/0:29,0:29:87.30:0,87,7522	0/0:22,0:22:63.22:0,63,5196	0/0:25,0:25:75.24:0,75,5586	0/0:35,0:35:99:0,105,6882	1/1:9,10:19:39.13:1772,39,0	0/0:39,0:39:99:0,117,9311	0/0:26,0:26:78.27:0,78,6726	1/1:12,9:21:57.16:2151,57,0	1/1:4,9:13:33.03:1319,33,0	0/0:23,0:23:66.23:0,66,5669	0/0:31,0:31:84.29:0,84,7516	0/0:23,0:23:69.24:0,69,5076	0/0:24,0:24:69.24:0,69,5107	0/0:23,0:23:60.21:0,60,4247	0/0:17,0:17:45.15:0,45,3544	0/0:33,0:33:99:0,99,8189	0/0:36,0:36:99:0,102,7191	1/1:7,16:23:39.11:1501,39,0	1/1:6,14:20:21.07:868,21,0	./.	0/0:32,0:32:90.30:0,90,7183	0/0:36,0:36:99:0,105,8966	0/0:31,0:31:84.29:0,84,7234	0/0:10,0:10:30.10:0,30,2692
chr10	75645348	.	C	CAA	2128.93	PASS	AB=0.905;AC=9;AF=0.167;AN=54;BaseQRankSum=10.347;DP=692;FS=9.171;HRun=1;HaplotypeScore=137.0439;InbreedingCoeff=0.8497;MQ=71.13;MQ0=0;MQRankSum=-10.779;QD=22.89;ReadPosRankSum=-3.515;VQSLOD=0.3192;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:44:99:0,120,1808	0/0:8,0:8:24.08:0,24,367	0/0:20,0:20:54.17:0,54,781	0/0:26,0:26:40.29:0,40,832	0/0:29,0:29:87.28:0,87,1302	0/0:22,0:22:63.20:0,63,941	0/0:25,0:25:75.24:0,75,1126	0/0:36,0:36:99:0,108,1596	0/1:17,2:19:3.95:626,0,4	0/0:41,0:41:99:0,117,1725	0/0:26,0:26:78.25:0,78,1168	1/1:15,5:20:14.63:572,15,0	1/1:11,2:13:9.60:333,10,0	0/0:24,0:24:69.21:0,69,1014	0/0:29,0:29:84.27:0,84,1264	0/0:23,0:23:69.23:0,69,1053	0/0:24,0:24:66.22:0,66,1007	0/0:23,0:23:60.20:0,60,915	0/0:16,0:16:45.14:0,45,669	0/0:33,0:33:99:0,99,1513	0/0:37,0:37:99:0,105,1511	1/1:21,1:22:40.55:559,41,0	1/1:19,0:19:4.39:189,4,0	./.	0/0:30,0:30:90.29:0,90,1356	0/0:35,0:35:99:0,105,1603	0/0:29,0:29:84.28:0,84,1280	0/0:10,0:10:30.10:0,30,459
chr10	75645351	.	A	AC	698.06	PASS	AB=0.885;AC=7;AF=0.130;AN=54;BaseQRankSum=8.766;DP=682;FS=1.530;HRun=1;HaplotypeScore=119.0072;InbreedingCoeff=0.5855;MQ=70.89;MQ0=0;MQRankSum=-8.791;QD=9.56;ReadPosRankSum=0.603;VQSLOD=1.2350;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,1569	0/0:8,0:8:24.07:0,24,299	0/0:22,0:22:56.99:0,57,637	0/0:26,0:26:64.01:0,64,833	0/0:30,0:30:90.25:0,90,1125	0/0:22,0:22:66.20:0,66,842	0/0:25,0:25:75.22:0,75,945	0/0:39,0:39:99:0,111,1382	0/1:11,2:13:10.89:144,0,11	0/0:43,0:43:99:0,126,1589	0/0:30,0:30:87.27:0,87,1111	1/1:10,5:15:4.56:257,5,0	0/1:9,2:11:2.44:104,0,2	0/0:25,0:25:72.23:0,72,930	0/0:30,0:30:90.28:0,90,1154	0/0:24,0:24:66.18:0,66,817	0/0:24,0:24:69.18:0,69,852	0/0:22,0:22:57.14:0,57,707	0/0:15,0:15:45.15:0,45,584	0/0:36,0:36:99:0,105,1309	0/0:35,0:35:96.19:0,96,1170	1/1:17,1:18:20.87:276,21,0	0/1:15,0:16:6.14:50,0,6	./.	0/0:31,0:31:87.27:0,87,1115	0/0:35,0:35:99:0,105,1351	0/0:28,0:28:84.24:0,84,1059	0/0:10,0:10:30.10:0,30,389
chr10	75645389	.	T	TA	4205.60	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.308;DP=672;FS=8.972;HRun=1;HaplotypeScore=105.5976;InbreedingCoeff=0.9980;MQ=72.64;MQ0=1;MQRankSum=-8.856;QD=37.22;ReadPosRankSum=-1.560;VQSLOD=2.4130;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:96.32:0,96,1342	0/0:7,0:7:21.07:0,21,294	0/0:29,0:29:76.85:0,77,1090	0/0:27,0:26:71.72:0,72,963	0/0:32,0:32:96.31:0,96,1324	0/0:23,0:23:66.22:0,66,923	0/0:25,0:25:72.20:0,72,952	0/0:31,0:31:93.29:0,93,1267	1/1:0,16:16:45.62:714,46,0	0/0:33,0:33:96.32:0,96,1343	0/0:24,0:24:72.24:0,72,1007	1/1:0,20:20:43.56:674,44,0	1/1:0,13:13:28.92:435,29,0	0/0:22,0:22:66.22:0,66,923	0/0:30,0:30:90.28:0,90,1239	0/0:17,0:17:51.17:0,51,712	0/0:23,0:23:58.55:0,59,913	0/0:19,0:19:54.16:0,54,734	0/0:15,0:15:45.14:0,45,611	0/0:34,0:34:99:0,102,1425	0/0:22,0:22:63.21:0,63,879	1/1:1,21:22:49.22:708,49,0	1/1:1,31:32:84.29:1340,84,0	1/1:0,10:10:21.07:335,21,0	0/0:33,0:33:99:0,99,1383	0/0:42,0:42:99:0,120,1659	0/0:29,0:29:87.29:0,87,1217	0/0:9,0:9:27.05:0,27,356
chr10	75646480	.	TCTCA	T	871.08	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=3.473;DP=615;FS=8.223;HRun=0;HaplotypeScore=95.4639;InbreedingCoeff=0.0005;MQ=75.82;MQ0=15;MQRankSum=-0.160;QD=5.41;ReadPosRankSum=1.605;VQSLOD=1.0312;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,34:38:5.09:210,5,0	0/1:6,0:6:5.12:5,0,144	0/0:46,0:28:77.17:0,77,859	0/0:45,0:29:76.96:0,77,756	0/0:16,0:16:27.39:0,27,403	0/0:20,0:19:50.99:0,51,596	0/0:24,0:24:69.48:0,69,821	0/0:23,0:23:68.99:0,69,639	0/1:16,0:17:99:179,0,183	0/0:17,0:17:51.05:0,51,676	0/0:17,0:17:41.75:0,42,561	0/1:7,0:18:97.50:97,0,101	0/1:8,0:8:95.55:96,0,96	0/0:26,0:25:69.07:0,69,1133	0/0:24,0:24:66.02:0,66,956	0/0:26,0:26:28.85:0,29,874	0/0:37,0:37:93.30:0,93,1155	0/0:16,0:14:39.02:0,39,759	0/0:19,0:19:30.61:0,31,501	0/0:13,0:13:35.96:0,36,395	0/0:31,0:31:57.15:0,57,708	0/1:13,0:13:99:133,0,181	0/1:15,0:15:84.76:177,0,85	0/1:19,0:35:99:109,0,208	0/0:11,0:11:33:0,33,388	0/0:16,0:16:27.77:0,28,475	0/0:27,0:26:6.42:0,6,876	0/1:9,0:7:0.29:0,0,328
chr10	75646482	.	TCA	T	343.45	PASS	AB=0.945;AC=18;AF=0.346;AN=52;BaseQRankSum=1.919;DP=650;FS=4.309;HRun=0;HaplotypeScore=82.3091;InbreedingCoeff=-0.3631;MQ=73.00;MQ0=18;MQRankSum=-0.890;QD=0.95;ReadPosRankSum=0.391;VQSLOD=1.5240;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:41:11.67:67,12,0	0/1:6,0:6:12.27:12,0,38	./.	./.	0/1:16,0:17:5.12:5,0,70	0/1:19,2:20:14.22:14,0,149	0/0:24,0:24:17.91:0,18,213	0/0:27,0:27:2.92:0,3,17	0/0:19,0:19:24:0,24,228	0/1:18,0:18:15.10:15,0,94	0/1:17,0:17:48.78:49,0,131	0/0:20,0:20:11.97:0,12,103	0/0:10,0:10:11.95:0,12,109	0/0:28,0:27:12.68:0,13,408	0/1:21,5:26:34.40:34,0,267	0/1:22,0:25:24.85:25,0,238	0/1:32,6:37:34.39:34,0,262	0/1:16,1:15:8.47:8,0,338	0/1:18,0:20:30.32:30,0,99	0/1:13,1:14:54.98:55,0,56	0/1:35,0:35:59.95:60,0,149	0/0:14,0:14:21.02:0,21,222	0/0:17,0:16:8.13:0,8,90	0/0:39,0:38:23.98:0,24,224	0/1:12,0:12:17.35:17,0,71	0/1:17,0:17:5.82:6,0,81	0/1:26,0:26:46.38:46,0,277	0/1:9,0:8:16.94:17,0,112
chr10	75651867	.	CT	C	878.60	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.051;DP=551;FS=10.214;HRun=2;HaplotypeScore=51.4426;InbreedingCoeff=0.9955;MQ=86.33;MQ0=0;MQRankSum=-3.628;QD=33.79;ReadPosRankSum=0.296;VQSLOD=2.9199;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:75.24:973,75,0	0/0:8,0:8:24.08:0,24,360	0/0:14,0:14:39.12:0,39,549	0/0:24,0:24:72.24:0,72,1056	0/0:20,0:20:60.20:0,60,897	0/0:19,0:19:57.19:0,57,854	0/0:16,0:16:48.16:0,48,720	0/0:33,0:33:99:0,99,1414	0/0:11,0:11:33.11:0,33,495	0/0:29,0:29:84.27:0,84,1208	0/0:22,0:22:60.19:0,60,880	0/0:15,0:15:45.13:0,45,634	0/0:13,0:13:39.12:0,39,565	0/0:11,0:11:30.10:0,30,448	0/0:23,0:23:69.21:0,69,995	0/0:19,0:19:57.19:0,57,853	0/0:30,0:30:90.25:0,90,1284	0/0:27,0:27:81.25:0,81,1190	0/0:16,0:16:45.14:0,45,630	0/0:27,0:27:81.27:0,81,1209	0/0:21,0:21:63.21:0,63,943	0/0:18,0:18:54.18:0,54,809	0/0:17,0:17:51.15:0,51,724	0/0:10,0:10:30.10:0,30,450	0/0:18,0:18:54.17:0,54,790	0/0:20,0:20:60.20:0,60,900	0/0:35,0:35:99:0,105,1535	0/0:9,0:9:27.09:0,27,403
chr10	75652027	.	CA	C	421.08	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.590;DP=552;FS=0.000;HRun=6;HaplotypeScore=48.0503;InbreedingCoeff=0.9483;MQ=67.92;MQ0=0;MQRankSum=-1.487;QD=22.16;ReadPosRankSum=-0.554;VQSLOD=2.4088;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:48.12:516,48,0	0/0:9,0:9:24.08:0,24,316	0/0:5,0:5:12:0,12,124	0/0:5,0:5:15.05:0,15,197	0/0:40,0:40:99:0,117,1539	0/0:16,0:16:45.10:0,45,573	0/0:14,0:14:39.11:0,39,497	0/0:19,0:19:48.15:0,48,620	0/0:15,0:15:45.13:0,45,576	0/0:37,0:37:99:0,111,1429	0/0:30,0:30:90.29:0,90,1184	0/0:26,0:26:75.22:0,75,970	0/0:14,0:14:39.11:0,39,498	0/0:18,0:18:54.16:0,54,684	0/0:16,0:16:48.13:0,48,603	0/0:14,0:14:39.10:0,39,485	0/0:20,0:20:54.18:0,54,711	0/0:20,0:20:51.17:0,51,671	0/0:11,0:11:33.09:0,33,409	0/0:31,0:31:93.29:0,93,1208	0/0:9,0:9:27.09:0,27,355	0/0:15,0:15:36.12:0,36,474	0/0:32,0:32:93.30:0,93,1223	0/0:8,0:8:21.07:0,21,276	0/0:41,0:41:99:0,114,1454	0/0:22,0:22:63.20:0,63,828	0/0:33,0:32:84.27:0,84,1105	0/0:13,0:13:36.12:0,36,474
chr10	75652488	.	TG	T	1682.84	PASS	AB=0.907;AC=24;AF=0.429;AN=56;BaseQRankSum=7.787;DP=469;FS=2.054;HRun=11;HaplotypeScore=65.5022;InbreedingCoeff=0.1187;MQ=76.51;MQ0=0;MQRankSum=-1.062;QD=6.16;ReadPosRankSum=5.747;VQSLOD=1.4478;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:2.53:3,0,196	0/1:6,0:7:0.85:1,0,20	0/0:16,0:16:23.91:0,24,225	0/1:14,1:15:45.80:46,0,46	0/0:12,1:13:2.36:0,2,209	0/1:17,2:19:7.18:7,0,341	0/0:27,5:32:44.48:0,44,660	0/1:9,0:9:10.42:10,0,84	1/1:6,14:20:9.95:288,10,0	0/0:16,0:16:1.93:0,2,196	0/1:10,1:11:9.62:10,0,104	1/1:4,13:18:31.99:252,32,0	1/1:4,11:15:26.95:222,27,0	0/0:13,0:13:21.03:0,21,215	0/0:20,2:22:4.82:0,5,442	0/0:12,1:16:5.27:0,5,245	0/0:24,0:25:57.39:0,57,565	0/0:23,0:23:51.93:0,52,511	0/1:13,1:14:12.63:13,0,75	0/1:4,1:5:18.64:19,0,19	0/0:18,1:19:5.43:0,5,263	1/1:3,9:13:26.01:203,26,0	1/1:2,9:13:27.59:207,28,0	1/1:6,25:31:62.91:517,63,0	0/1:6,1:7:9.61:10,0,111	0/1:14,2:16:25.24:25,0,159	0/1:19,3:23:19.99:20,0,397	0/1:7,1:10:7.57:8,0,151
chr10	75653647	.	GA	G	3802.29	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.905;DP=641;FS=10.917;HRun=9;HaplotypeScore=63.5256;InbreedingCoeff=0.9813;MQ=73.61;MQ0=0;MQRankSum=-1.236;QD=23.18;ReadPosRankSum=2.785;VQSLOD=4.1456;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:39:99:906,99,0	0/0:12,0:12:33.09:0,33,376	0/0:15,0:15:24.07:0,24,272	0/0:13,0:13:27.07:0,27,296	0/0:25,0:24:63.19:0,63,727	0/0:25,0:27:71.85:0,72,770	0/0:18,0:18:54.16:0,54,623	0/0:24,1:25:38.72:0,39,691	1/1:3,26:29:69.03:632,69,0	0/0:26,0:26:66.19:0,66,753	0/0:19,1:20:23.68:0,24,515	1/1:1,20:21:60.03:549,60,0	1/1:2,18:20:54.03:494,54,0	0/0:30,0:30:59.88:0,60,942	0/0:28,0:28:81.24:0,81,935	0/0:24,2:26:17.27:0,17,697	0/0:22,0:22:60.17:0,60,683	0/0:16,0:16:45.13:0,45,515	0/0:18,0:18:42.11:0,42,475	0/0:30,2:32:41.73:0,42,718	0/0:33,0:35:99:0,99,1122	1/1:1,17:18:51.03:467,51,0	1/1:2,19:21:19.41:432,19,0	1/1:3,13:16:7.40:322,7,0	0/0:21,0:21:57.17:0,57,658	0/0:27,1:29:78.22:0,78,885	0/0:25,0:25:70.44:0,70,790	0/0:14,0:14:36.11:0,36,415
chr10	75655880	.	CA	C	2622.99	PASS	AB=0.914;AC=16;AF=0.286;AN=56;BaseQRankSum=10.358;DP=579;FS=1.285;HRun=10;HaplotypeScore=58.2482;InbreedingCoeff=0.8382;MQ=75.06;MQ0=0;MQRankSum=0.828;QD=15.25;ReadPosRankSum=4.742;VQSLOD=3.9717;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:59.99:521,60,0	0/0:10,0:10:27.05:0,27,287	0/1:16,2:18:19.09:19,0,239	0/0:9,0:9:17.06:0,17,168	0/0:31,1:33:57.98:0,58,834	0/0:23,1:24:37.09:0,37,622	0/0:15,0:15:36.08:0,36,389	0/0:31,1:32:43.13:0,43,697	1/1:4,17:21:17.80:384,18,0	0/0:29,0:29:60.15:0,60,652	0/0:17,0:17:45.11:0,45,490	1/1:4,10:14:26.98:234,27,0	1/1:3,18:21:14.80:357,15,0	0/0:20,0:20:51.11:0,51,542	0/0:14,0:15:32.91:0,33,333	0/0:20,0:20:22.20:0,22,465	0/0:20,0:20:54.09:0,54,573	0/0:18,0:18:48.12:0,48,524	0/0:21,0:23:59.78:0,60,620	0/0:23,0:23:63.05:0,63,657	0/0:10,0:10:27.06:0,27,284	1/1:0,14:14:35.98:313,36,0	1/1:5,33:38:86.97:755,87,0	1/1:1,10:11:26.99:234,27,0	0/0:22,0:26:65.84:0,66,686	0/0:31,0:30:78.19:0,78,843	0/0:32,0:32:81.17:0,81,863	0/1:12,1:13:5:5,0,178
chr10	75656057	.	TGAGAGAGAGA	T	2147.14	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=6.605;DP=604;FS=0.715;HRun=0;HaplotypeScore=178.3738;InbreedingCoeff=0.7111;MQ=65.34;MQ0=12;MQRankSum=-8.032;QD=17.60;ReadPosRankSum=3.246;VQSLOD=2.6199;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:8.99:0,9,184	0/1:10,0:10:24.31:24,0,338	./.	0/0:49,0:20:3.47:0,3,27	0/0:11,0:14:9.03:0,9,317	0/0:24,0:25:45.15:0,45,1645	0/0:19,0:19:29.77:0,30,1099	0/0:23,0:23:19.62:0,20,494	1/1:8,7:15:9.13:269,9,0	0/0:18,0:19:29.77:0,30,880	0/0:20,0:24:39.13:0,39,1349	1/1:7,9:19:0.35:569,0,0	1/1:13,9:24:30.10:843,30,0	0/0:20,0:20:30.10:0,30,1090	0/0:31,0:32:54.24:0,54,2108	0/0:12,0:14:33.07:0,33,1145	0/0:26,0:27:57.19:0,57,2013	0/0:10,0:14:33.10:0,33,1059	0/0:17,0:17:27.09:0,27,914	0/0:14,0:17:30.10:0,30,968	0/0:11,0:14:18.29:0,18,683	1/1:16,7:23:6.02:180,6,0	1/1:11,7:18:11.99:332,12,0	1/1:7,6:13:2.82:90,3,0	0/0:26,0:26:54.19:0,54,1922	0/0:25,0:29:49.72:0,50,1728	0/0:21,0:23:41.52:0,42,1296	0/0:19,0:17:30.10:0,30,1209
chr10	75659559	.	A	AAAAT	2055.53	PASS	AC=28;AF=0.636;AN=44;BaseQRankSum=-3.786;DP=190;FS=1.296;HRun=0;HaplotypeScore=31.1041;InbreedingCoeff=0.5127;MQ=54.44;MQ0=2;MQRankSum=1.391;QD=17.42;ReadPosRankSum=0.361;VQSLOD=3.0770;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:3:0,3,26	1/1:2,2:4:6.02:140,6,0	./.	0/0:11,0:7:0:0,0,0	0/0:4,0:4:6.02:0,6,92	1/1:5,0:6:6.02:105,6,0	./.	1/1:18,0:16:2.97:20,3,0	0/0:3,0:4:3:0,3,28	0/0:6,0:6:3:0,3,28	0/0:5,0:5:3.01:0,3,46	0/0:2,0:5:9.01:0,9,84	1/1:3,0:6:2.60:10,3,0	1/1:4,0:4:6.01:92,6,0	./.	1/1:5,1:6:3.01:70,3,0	1/1:6,9:15:12.04:279,12,0	1/1:11,10:21:21.07:483,21,0	1/1:7,3:8:9.03:209,9,0	1/1:4,2:6:6.02:140,6,0	1/1:0,2:3:3.01:70,3,0	./.	./.	./.	0/0:6,0:6:6.02:0,6,92	1/1:6,0:6:15.05:303,15,0	1/1:5,0:5:3.01:65,3,0	1/1:1,5:8:9.03:210,9,0
chr10	75661222	.	CACA	C	1636.16	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.419;DP=795;FS=0.610;HRun=0;HaplotypeScore=109.3072;InbreedingCoeff=0.9984;MQ=74.93;MQ0=0;MQRankSum=-3.817;QD=29.22;ReadPosRankSum=2.616;VQSLOD=4.0969;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,51:56:99:1731,114,0	0/0:12,0:12:36.11:0,36,726	0/0:32,0:32:75.19:0,75,1388	0/0:28,0:28:35.15:0,35,1104	0/0:28,0:28:81.24:0,81,1702	0/0:32,0:32:84.27:0,84,1752	0/0:25,0:25:66.23:0,66,1402	0/0:30,0:30:78.22:0,78,1547	0/0:34,0:34:84.27:0,84,1733	0/0:36,0:36:87.21:0,87,1799	0/0:12,0:12:36.12:0,36,770	0/0:33,0:33:81.26:0,81,1685	0/0:26,0:26:72.25:0,72,1531	0/0:24,0:24:66.23:0,66,1391	0/0:25,0:25:66.21:0,66,1385	0/0:21,0:21:57.14:0,57,1147	0/0:41,0:41:99:0,117,2500	0/0:26,0:26:69.23:0,69,1387	0/0:20,0:20:57.14:0,57,1177	0/0:25,0:25:63.21:0,63,1354	0/0:50,0:50:99:0,132,2830	0/0:19,0:19:51.17:0,51,1082	0/0:17,0:17:36.12:0,36,777	0/0:42,0:42:99:0,117,2428	0/0:23,0:23:63.22:0,63,1345	0/0:34,0:34:90.31:0,90,1885	0/0:35,0:35:93.32:0,93,1932	0/0:9,0:9:27.09:0,27,583
chr10	75661440	.	AT	A	4231.33	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.819;DP=732;FS=5.596;HRun=10;HaplotypeScore=70.8422;InbreedingCoeff=0.9383;MQ=68.78;MQ0=1;MQRankSum=-0.092;QD=21.26;ReadPosRankSum=2.835;VQSLOD=5.9629;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,39:42:99:912,105,0	0/0:11,0:11:30.07:0,30,323	0/0:12,0:11:10.82:0,11,170	0/0:14,0:12:4.58:0,5,155	0/0:33,1:34:70.22:0,70,991	0/0:25,1:26:40.12:0,40,671	0/0:12,1:13:7.02:0,7,298	0/0:38,2:40:44.12:0,44,923	1/1:3,20:23:50.98:443,51,0	0/0:30,0:30:81.21:0,81,889	0/0:27,0:27:53.12:0,53,796	1/1:2,25:27:62.98:547,63,0	1/1:2,24:26:65.98:573,66,0	0/0:35,0:35:93.24:0,93,1021	0/0:31,0:31:90.22:0,90,979	0/0:31,0:31:93.24:0,93,1022	0/0:19,0:19:51.08:0,51,540	0/0:10,2:12:7.02:0,7,297	0/0:25,0:26:59.98:0,60,637	0/0:29,0:28:69.01:0,69,737	0/0:30,1:31:78.21:0,78,861	1/1:3,27:30:74.96:651,75,0	1/1:1,24:25:65.98:573,66,0	1/1:3,21:26:64.06:533,64,0	0/0:23,0:23:63.15:0,63,681	0/0:32,0:33:90.07:0,90,970	0/0:27,2:29:31.94:0,32,784	0/0:25,0:26:72.03:0,72,776
chr10	75664122	.	TA	T	784.42	PASS	AB=0.752;AC=14;AF=0.250;AN=56;BaseQRankSum=5.922;DP=436;FS=0.736;HRun=12;HaplotypeScore=40.0306;InbreedingCoeff=0.7704;MQ=59.35;MQ0=56;MQRankSum=1.120;QD=7.47;ReadPosRankSum=1.554;VQSLOD=1.2883;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:12:18.33:53,18,0	0/0:10,0:11:32.87:0,33,309	0/0:13,0:11:3.77:0,4,195	0/0:11,1:9:11.50:0,12,95	0/0:16,0:14:30.06:0,30,304	0/0:12,0:10:23.88:0,24,227	0/0:16,0:13:30.02:0,30,294	0/0:18,0:17:23.98:0,24,218	1/1:6,9:12:23.90:186,24,0	0/0:15,0:13:24.05:0,24,244	0/1:7,1:7:8.21:8,0,107	1/1:3,7:8:20.90:163,21,0	1/1:2,12:13:35.85:279,36,0	0/0:16,0:9:19.24:0,19,175	0/0:15,0:13:27.05:0,27,274	0/0:16,0:12:33.04:0,33,325	0/0:28,0:21:42.05:0,42,417	0/0:20,0:13:21.04:0,21,213	0/0:17,0:17:47.91:0,48,461	0/0:18,0:18:39.04:0,39,385	0/0:26,0:19:45.02:0,45,437	1/1:6,6:8:11.94:93,12,0	0/1:3,5:8:42.96:75,0,43	1/1:7,5:5:14.94:116,15,0	0/0:7,0:7:15.03:0,15,152	0/0:20,0:16:36.07:0,36,366	0/0:17,1:16:18.83:0,19,352	0/0:14,0:10:24.05:0,24,244
chr10	75665569	.	TA	T	927.60	PASS	AB=0.808;AC=12;AF=0.214;AN=56;BaseQRankSum=8.681;DP=450;FS=5.075;HRun=11;HaplotypeScore=55.4040;InbreedingCoeff=0.7484;MQ=67.31;MQ0=2;MQRankSum=0.122;QD=12.37;ReadPosRankSum=0.833;VQSLOD=3.2871;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:29:47.13:0,47,673	0/0:3,0:3:9.02:0,9,96	0/1:13,0:10:9.29:9,0,89	0/0:8,0:7:7.26:0,7,63	0/0:25,0:25:63.14:0,63,663	0/0:22,1:23:44.53:0,45,679	0/0:10,0:10:24.05:0,24,249	0/0:30,0:29:75.18:0,75,795	1/1:6,11:16:16.22:222,16,0	0/0:14,0:14:33.08:0,33,351	0/0:18,0:17:42.11:0,42,448	1/1:4,4:8:17.98:148,18,0	0/1:3,5:8:14.01:105,0,14	0/0:11,0:11:33.08:0,33,352	0/0:13,0:13:24.02:0,24,244	0/0:11,0:12:29.91:0,30,302	0/0:32,1:32:65.59:0,66,903	0/0:34,0:32:81.20:0,81,864	0/0:16,1:16:5.42:0,5,257	0/0:13,0:13:30.08:0,30,320	0/0:16,1:17:23.45:0,23,439	1/1:0,6:6:17.98:148,18,0	1/1:0,8:9:26.01:203,26,0	1/1:2,11:13:32.95:271,33,0	0/0:15,0:14:36.08:0,36,377	0/0:28,1:30:50.39:0,50,725	0/0:11,0:11:29.90:0,30,283	0/0:9,0:9:23.99:0,24,242
chr10	75665658	.	G	GA	1458.94	PASS	AB=0.857;AC=15;AF=0.268;AN=56;BaseQRankSum=8.526;DP=403;FS=8.836;HRun=10;HaplotypeScore=48.8940;InbreedingCoeff=0.7508;MQ=59.78;MQ0=3;MQRankSum=-0.492;QD=13.51;ReadPosRankSum=0.404;VQSLOD=2.6325;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:24:44.89:448,45,0	0/0:4,0:4:11.99:0,12,99	0/1:15,0:5:12.98:13,0,18	0/1:13,0:6:1.32:1,0,7	0/0:20,0:20:47.92:0,48,394	0/0:13,0:13:32.96:0,33,271	0/0:10,0:10:18.41:0,18,144	0/0:24,0:24:59.90:0,60,489	1/1:3,8:12:23.89:238,24,0	0/0:23,0:23:53.89:0,54,437	0/0:23,1:24:30.91:0,31,457	1/1:1,8:9:21.05:224,21,0	1/1:6,5:9:15.04:160,15,0	0/0:8,0:8:11.98:0,12,98	0/0:19,0:19:47.92:0,48,391	0/0:8,0:8:23.97:0,24,197	0/0:29,0:31:60.41:0,60,499	0/0:26,0:27:59.89:0,60,495	0/0:9,0:8:14.98:0,15,123	0/0:13,0:13:29.95:0,30,245	0/0:8,0:8:14.97:0,15,120	0/1:2,6:8:6.59:142,0,7	1/1:4,6:10:26.85:261,27,0	1/1:1,5:6:15.04:160,15,0	0/0:19,0:19:43.95:0,44,351	0/0:18,0:19:31.98:0,32,252	0/0:12,0:12:23.96:0,24,197	0/0:2,0:2:5.99:0,6,49
chr10	75667080	.	T	TA	2518.99	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-9.251;DP=459;FS=8.961;HRun=9;HaplotypeScore=44.1214;InbreedingCoeff=0.9303;MQ=61.33;MQ0=0;MQRankSum=2.968;QD=23.54;ReadPosRankSum=1.827;VQSLOD=4.1429;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:32:75.11:807,75,0	0/0:9,0:9:23.99:0,24,208	0/0:10,0:10:17.98:0,18,152	0/0:4,0:4:9.27:0,9,66	0/0:17,0:17:44.98:0,45,390	0/0:18,0:18:50.85:0,51,423	0/0:8,0:8:20.97:0,21,177	0/0:30,0:30:65.95:0,66,570	1/1:2,10:12:1.36:240,1,0	0/0:17,0:16:44.99:0,45,391	0/0:15,0:15:44.94:0,45,381	1/1:4,11:15:39.10:424,39,0	1/1:2,14:16:19.07:438,19,0	0/0:18,0:18:44.97:0,45,386	0/0:8,0:8:24:0,24,208	0/0:10,0:10:26.99:0,27,234	0/0:28,0:28:74.90:0,75,635	0/0:23,0:23:53.82:0,54,456	0/0:24,0:24:65.97:0,66,568	0/0:19,0:19:47.98:0,48,416	0/0:19,0:19:47.96:0,48,412	1/1:0,3:3:9.02:100,9,0	1/1:0,9:9:18.05:199,18,0	1/1:1,19:20:45.12:498,45,0	0/0:13,0:13:32.95:0,33,280	0/0:27,0:28:74.01:0,74,630	0/0:14,0:14:35.92:0,36,300	0/0:18,1:19:17.81:0,18,383
chr10	75667163	.	ATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	A	998.13	PASS	AB=0.914;AC=7;AF=0.140;AN=50;BaseQRankSum=2.907;DP=480;FS=0.000;HRun=0;HaplotypeScore=310.3935;InbreedingCoeff=0.6065;MQ=51.76;MQ0=19;MQRankSum=-0.357;QD=15.12;ReadPosRankSum=1.711;VQSLOD=1.1770;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:31:56.28:56,0,117	0/0:4,0:4:9.03:0,9,739	0/0:20,0:8:6.02:0,6,306	0/0:28,0:17:21.05:0,21,645	0/0:12,0:11:3.01:0,3,199	0/0:24,0:23:42.14:0,42,3639	0/0:16,0:17:26.52:0,27,2126	0/0:25,0:25:48.15:0,48,2234	./.	0/0:22,0:21:33.11:0,33,2914	0/0:8,0:9:3.01:0,3,339	1/1:9,4:13:9.03:615,9,0	1/1:9,1:10:9.03:296,9,0	0/0:9,0:8:9.92:0,10,811	0/0:13,0:14:24.08:0,24,2044	0/0:14,0:14:18.06:0,18,1610	0/0:34,0:34:51.16:0,51,3503	0/0:21,0:19:36.08:0,36,3154	0/0:22,0:21:18.53:0,19,1604	0/0:16,0:15:21.07:0,21,1608	0/0:38,0:36:49.52:0,50,4785	./.	./.	1/1:11,0:10:8.96:160,9,0	0/0:21,0:21:31.87:0,32,2127	0/0:26,0:21:42.14:0,42,3283	0/0:6,0:7:9.03:0,9,729	0/0:11,0:9:11.47:0,11,937
chr10	75675501	.	AC	A	3142.02	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.368;DP=647;FS=1.210;HRun=8;HaplotypeScore=65.1898;InbreedingCoeff=0.9994;MQ=88.18;MQ0=0;MQRankSum=-1.200;QD=24.36;ReadPosRankSum=2.113;VQSLOD=4.4855;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:63.09:0,63,745	0/0:12,0:12:36.11:0,36,435	0/0:26,0:26:31.48:0,31,471	0/0:28,0:28:50.80:0,51,538	0/0:36,0:36:99:0,102,1219	0/0:24,0:24:69.21:0,69,833	0/0:16,0:16:39.12:0,39,471	0/0:31,0:31:78.23:0,78,925	1/1:0,10:10:27.04:261,27,0	0/0:29,0:29:81.22:0,81,952	0/0:29,0:29:84.26:0,84,1014	1/1:2,19:21:60.10:579,60,0	1/1:1,24:25:66.10:637,66,0	0/0:20,0:20:57.17:0,57,688	0/0:21,1:22:28.19:0,28,614	0/0:13,0:13:36.11:0,36,435	0/0:17,0:17:48.13:0,48,568	0/0:25,0:25:75.20:0,75,891	0/0:12,0:12:32.97:0,33,377	0/0:43,0:43:99:0,123,1466	0/0:13,0:13:33.06:0,33,382	1/1:2,28:30:87.14:840,87,0	1/1:3,20:23:57.09:550,57,0	1/1:3,17:20:48.08:463,48,0	0/0:21,0:21:54.15:0,54,639	0/0:28,0:28:78.24:0,78,941	0/0:28,0:28:81.22:0,81,960	0/0:18,0:18:48.15:0,48,580
chr10	75676031	.	AT	A	2688.27	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.634;DP=577;FS=1.885;HRun=6;HaplotypeScore=57.0961;InbreedingCoeff=0.9945;MQ=73.26;MQ0=0;MQRankSum=-0.262;QD=24.66;ReadPosRankSum=2.838;VQSLOD=3.4912;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.19:0,63,812	0/0:8,0:8:24.08:0,24,315	0/0:17,0:15:28.89:0,29,338	0/0:13,0:13:26.37:0,26,306	0/0:36,0:36:99:0,105,1331	0/0:30,0:30:72.12:0,72,1054	0/0:20,0:20:54.15:0,54,693	0/0:19,0:19:57.19:0,57,750	1/1:1,19:20:51.13:547,51,0	0/0:27,0:27:75.22:0,75,948	0/0:13,0:13:39.12:0,39,499	1/1:3,8:11:21.04:218,21,0	1/1:0,23:23:57.14:612,57,0	0/0:11,0:11:27.08:0,27,341	0/0:9,0:9:27.07:0,27,341	0/0:16,1:17:15.92:0,16,560	0/0:21,0:21:54.14:0,54,679	0/0:33,0:33:87.23:0,87,1111	0/0:30,0:30:87.28:0,87,1139	0/0:31,0:31:93.29:0,93,1210	0/0:17,0:17:51.15:0,51,656	1/1:3,17:20:51.07:534,51,0	1/1:0,26:26:69.17:740,69,0	1/1:2,7:9:21.05:226,21,0	0/0:23,0:23:60.18:0,60,775	0/0:29,0:29:75.23:0,75,962	0/0:24,0:24:69.21:0,69,894	0/0:16,0:16:48.16:0,48,632
chr10	75676301	.	ACATCATCATCAT	A	499.87	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=1.924;DP=755;FS=1.641;HRun=0;HaplotypeScore=290.6008;InbreedingCoeff=0.9423;MQ=60.82;MQ0=9;MQRankSum=-3.874;QD=10.00;ReadPosRankSum=0.078;VQSLOD=2.3019;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,16:49:18.06:590,18,0	0/0:11,0:11:27.09:0,27,1468	./.	./.	0/0:30,0:30:54.19:0,54,2900	0/0:24,0:26:54.19:0,54,2726	0/0:23,0:25:30.10:0,30,1461	0/0:41,0:39:24.02:0,24,386	0/0:24,0:24:51.18:0,51,2848	0/0:27,0:27:39.12:0,39,1868	0/0:13,0:14:18.06:0,18,698	0/0:37,0:37:77.73:0,78,4060	0/0:29,0:29:43.02:0,43,2163	0/0:18,0:18:45.15:0,45,2472	0/0:33,0:33:47.62:0,48,2508	0/0:30,0:30:48.16:0,48,2534	0/0:22,0:24:48.16:0,48,2524	0/0:19,0:19:30.10:0,30,1701	0/0:15,0:14:12.04:0,12,698	0/0:35,0:36:51.15:0,51,2522	0/0:44,0:44:84.27:0,84,4307	0/0:23,0:23:40.37:0,40,1877	0/0:20,0:20:31.66:0,32,1615	0/0:29,0:29:30.10:0,30,1570	0/0:20,0:20:33.11:0,33,1918	0/0:25,0:25:42.14:0,42,2211	0/0:36,0:37:60.21:0,60,3161	0/0:10,0:11:18.06:0,18,969
chr10	75677195	.	T	TA	496.66	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.445;DP=623;FS=1.004;HRun=5;HaplotypeScore=58.8793;InbreedingCoeff=0.9937;MQ=76.56;MQ0=0;MQRankSum=-2.403;QD=27.59;ReadPosRankSum=0.221;VQSLOD=3.3335;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:45.15:592,45,0	0/0:10,0:10:30.08:0,30,322	0/0:15,0:15:41.65:0,42,382	0/0:15,0:15:20.64:0,21,225	0/0:29,0:29:78.14:0,78,813	0/0:26,0:26:69.17:0,69,741	0/0:16,0:16:42.09:0,42,442	0/0:37,0:37:90.21:0,90,961	0/0:27,0:27:81.19:0,81,862	0/0:27,0:27:75.18:0,75,801	0/0:19,0:19:57.14:0,57,612	0/0:16,0:16:45.10:0,45,475	0/0:28,0:28:72.15:0,72,764	0/0:15,0:15:39.10:0,39,419	0/0:26,0:26:69.16:0,69,734	0/0:19,0:19:51.13:0,51,548	0/0:22,0:22:52.65:0,53,540	0/0:24,0:24:63.16:0,63,677	0/0:14,0:14:36.08:0,36,379	0/0:26,0:26:72.18:0,72,774	0/0:20,0:20:60.15:0,60,645	0/0:28,0:28:81.18:0,81,860	0/0:27,0:27:66.12:0,66,692	0/0:9,0:9:27.07:0,27,290	0/0:18,0:18:48.09:0,48,506	0/0:28,0:28:78.20:0,78,838	0/0:46,0:46:99:0,135,1451	0/0:18,0:18:44.55:0,45,483
chr10	75677913	.	A	AG	4254.29	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=16.367;DP=677;FS=4.839;HRun=1;HaplotypeScore=97.7863;InbreedingCoeff=0.9991;MQ=75.61;MQ0=4;MQRankSum=-9.629;QD=25.17;ReadPosRankSum=1.147;VQSLOD=4.7566;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:23.40:127,23,0	0/0:11,0:11:27.03:0,27,304	0/0:43,0:32:28.67:0,29,642	0/0:40,0:16:35.44:0,35,334	0/0:25,0:25:75.24:0,75,970	0/0:16,0:16:45.09:0,45,525	0/0:20,0:20:51.16:0,51,658	0/0:26,0:26:75.22:0,75,938	1/1:9,16:25:59.90:765,60,0	0/0:25,0:25:69.18:0,69,847	0/0:27,0:27:74.92:0,75,912	1/1:1,33:34:75.22:941,75,0	1/1:4,22:26:78.15:903,78,0	0/0:29,0:29:87.19:0,87,1041	0/0:27,0:27:81.21:0,81,972	0/0:24,1:25:42.13:0,42,885	0/0:36,0:36:99:0,105,1309	0/0:16,0:16:39.09:0,39,473	0/0:15,0:15:42.12:0,42,520	0/0:24,0:24:69.19:0,69,852	0/0:15,0:15:45.10:0,45,539	1/1:3,15:18:48.07:553,48,0	1/1:7,11:18:47.92:507,48,0	1/1:10,10:20:41.97:458,42,0	0/0:24,0:23:69.17:0,69,838	0/0:18,0:18:45.13:0,45,548	0/0:34,0:34:98.68:0,99,1238	0/0:11,0:11:33.09:0,33,410
chr10	75677914	.	G	GA	2044.57	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=12.421;DP=690;FS=2.672;HRun=9;HaplotypeScore=109.3188;InbreedingCoeff=0.9064;MQ=73.82;MQ0=5;MQRankSum=-7.968;QD=9.51;ReadPosRankSum=1.168;VQSLOD=2.5237;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:29:57.11:617,57,0	0/0:9,0:10:23.02:0,23,188	0/1:42,0:30:9.19:9,0,295	0/0:46,0:18:10.94:0,11,186	0/0:25,0:25:74.99:0,75,651	0/0:15,0:15:32.99:0,33,286	0/0:20,0:20:56.92:0,57,484	0/0:28,0:27:71.96:0,72,620	1/1:25,0:25:19.38:254,19,0	0/0:25,0:25:59.97:0,60,519	0/0:27,0:27:68.97:0,69,596	1/1:33,0:33:57.88:411,58,0	1/1:26,0:26:66.57:380,67,0	0/0:28,0:29:71.02:0,71,605	0/0:28,0:28:62.96:0,63,547	0/0:26,0:26:57.69:0,58,581	0/0:36,0:36:99:0,102,880	0/0:17,0:17:38.89:0,39,324	0/0:14,0:14:35.98:0,36,309	0/0:26,0:26:62.46:0,62,530	0/0:16,0:16:38.96:0,39,333	1/1:17,0:17:43.22:249,43,0	1/1:19,0:19:30.87:179,31,0	1/1:23,0:23:14.01:144,14,0	0/0:24,0:23:65.96:0,66,567	0/0:18,0:18:35.97:0,36,313	0/0:34,0:34:95.95:0,96,830	0/0:11,0:11:29.99:0,30,260
chr10	75677925	.	GAAAGA	G	4089.92	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.227;DP=708;FS=8.547;HRun=0;HaplotypeScore=149.8362;InbreedingCoeff=0.9983;MQ=66.28;MQ0=11;MQRankSum=-12.289;QD=32.72;ReadPosRankSum=2.824;VQSLOD=3.2824;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:45.13:0,45,1105	0/0:10,0:10:27.09:0,27,760	0/0:48,0:29:42.25:0,42,823	0/0:63,0:20:21.45:0,21,217	0/0:26,0:26:66.19:0,66,1616	0/0:15,0:15:36.11:0,36,887	0/0:21,0:21:45.11:0,45,1210	0/0:34,0:33:72.21:0,72,1661	1/1:6,17:23:48.13:741,48,0	0/0:30,0:30:84.27:0,84,2241	0/0:23,0:23:54.14:0,54,1459	1/1:7,17:24:66.10:971,66,0	1/1:8,20:28:54.10:785,54,0	0/0:29,0:29:66.19:0,66,1660	0/0:25,0:25:60.19:0,60,1554	0/0:25,1:26:31.76:0,32,1986	0/0:36,0:36:83.95:0,84,2212	0/0:17,0:17:45.08:0,45,1096	0/0:15,0:14:30.10:0,30,770	0/0:28,0:28:72.21:0,72,1755	0/0:14,0:14:24.08:0,24,668	1/1:3,14:17:39.12:563,39,0	1/1:4,11:15:39.10:565,39,0	1/1:6,12:18:33.08:466,33,0	0/0:27,0:26:63.20:0,63,1770	0/0:17,0:17:36.08:0,36,941	0/0:35,0:35:63.22:0,63,1821	0/0:14,0:14:42.14:0,42,1124
chr10	75678461	.	A	ATT	6280.29	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-2.343;DP=612;FS=1.256;HRun=1;HaplotypeScore=73.4505;InbreedingCoeff=0.9929;MQ=75.05;MQ0=0;MQRankSum=-1.296;QD=53.68;ReadPosRankSum=3.029;VQSLOD=4.8280;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,1929	0/0:4,0:4:12.04:0,12,182	0/0:20,0:20:60.15:0,60,842	0/0:18,0:18:51.14:0,51,741	0/0:24,0:24:69.11:0,69,1055	0/0:16,0:16:48.16:0,48,735	0/0:20,0:20:60.19:0,60,895	0/0:33,0:33:96.32:0,96,1450	1/1:1,21:22:66.23:1275,66,0	0/0:25,0:25:72.24:0,72,1103	0/0:12,0:12:36.12:0,36,549	1/1:1,14:17:42.14:811,42,0	1/1:0,23:23:63.22:1217,63,0	0/0:19,0:19:57.19:0,57,872	0/0:33,0:33:99:0,99,1494	0/0:22,0:22:66.21:0,66,990	0/0:19,0:19:57.19:0,57,873	0/0:8,0:8:21.07:0,21,322	0/0:16,0:16:48.15:0,48,698	0/0:21,0:21:57.19:0,57,873	0/0:43,0:43:99:0,126,1930	1/1:1,16:17:51.13:947,51,0	1/1:0,16:16:45.15:869,45,0	1/1:0,20:22:60.21:1160,60,0	0/0:29,0:29:84.29:0,84,1286	0/0:30,0:30:90.31:0,90,1379	0/0:25,0:25:75.25:0,75,1145	0/0:16,0:16:48.16:0,48,735
chr10	75681031	.	A	AGATGGATGGATG	3059.41	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-4.169;DP=675;FS=3.874;HRun=0;HaplotypeScore=192.2503;InbreedingCoeff=0.7654;MQ=57.99;MQ0=10;MQRankSum=-8.066;QD=16.19;ReadPosRankSum=-0.943;VQSLOD=2.2919;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:37:9.03:220,9,0	0/0:10,0:10:18.01:0,18,306	0/0:38,0:23:8.98:0,9,77	0/0:32,0:17:8.97:0,9,71	0/0:21,0:21:36.08:0,36,868	0/0:25,0:25:60.18:0,60,1679	0/0:21,0:21:30.02:0,30,458	0/0:35,0:33:10.87:0,11,308	1/1:6,16:25:3.01:175,3,0	0/0:20,0:20:51.15:0,51,1239	0/0:24,0:24:54.17:0,54,1534	1/1:6,16:24:12.04:698,12,0	1/1:2,21:26:24.08:1293,24,0	0/0:25,0:25:45.12:0,45,1022	0/0:31,0:31:63.16:0,63,1639	0/0:20,0:20:48.14:0,48,1307	0/0:20,0:20:26.98:0,27,531	0/0:24,0:23:13.13:0,13,1170	0/0:29,0:29:24.03:0,24,723	0/0:21,0:21:39.12:0,39,1208	0/0:16,0:16:24.07:0,24,690	1/1:5,15:20:9.03:420,9,0	1/1:7,8:18:6.96:184,7,0	1/1:15,9:26:3.01:175,3,0	0/0:20,0:20:45.12:0,45,1293	0/0:25,0:25:54.16:0,54,1400	0/0:29,0:29:72.15:0,72,1782	0/1:12,0:12:69.76:70,0,337
chr10	75682813	.	GC	G	1775	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.629;DP=758;FS=5.237;HRun=2;HaplotypeScore=72.2254;InbreedingCoeff=0.9959;MQ=79.07;MQ0=0;MQRankSum=-4.571;QD=36.98;ReadPosRankSum=3.023;VQSLOD=4.4515;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,48:48:99:1870,144,0	0/0:18,0:18:54.18:0,54,809	0/0:19,0:19:51.17:0,51,750	0/0:15,0:15:41.78:0,42,572	0/0:26,0:26:75.25:0,75,1121	0/0:37,0:37:99:0,111,1621	0/0:24,0:24:72.14:0,72,1048	0/0:32,0:32:96.32:0,96,1420	0/0:28,0:28:84.28:0,84,1238	0/0:33,0:33:99:0,99,1437	0/0:15,0:15:42.14:0,42,629	0/0:28,0:28:81.27:0,81,1203	0/0:24,0:24:72.18:0,72,1014	0/0:39,0:39:99:0,114,1681	0/0:36,0:36:99:0,108,1619	0/0:29,0:29:87.29:0,87,1304	0/0:40,0:40:99:0,120,1797	0/0:21,0:21:57.19:0,57,854	0/0:28,0:28:75.23:0,75,1079	0/0:28,0:28:81.27:0,81,1214	0/0:36,0:36:99:0,105,1572	0/0:29,0:29:87.29:0,87,1281	0/0:17,0:17:48.16:0,48,719	0/0:26,0:26:75.25:0,75,1123	0/0:31,0:31:90.30:0,90,1330	0/0:22,0:22:66.22:0,66,989	0/0:22,0:22:63.18:0,63,902	0/0:7,0:7:21.07:0,21,315
chr10	75683411	.	C	CT	1042.38	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-5.506;DP=747;FS=0.582;HRun=10;HaplotypeScore=82.6670;InbreedingCoeff=0.6495;MQ=68.92;MQ0=0;MQRankSum=-3.263;QD=16.04;ReadPosRankSum=-0.905;VQSLOD=3.7075;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,45:51:90.09:1128,90,0	0/0:16,0:16:29.95:0,30,246	0/0:14,0:14:30.19:0,30,223	0/1:14,0:12:20.09:20,0,103	0/0:35,0:35:86.75:0,87,700	0/0:32,0:32:80.88:0,81,665	0/0:24,0:24:59.87:0,60,486	0/0:35,0:35:86.84:0,87,707	0/0:26,0:26:65.89:0,66,539	0/0:34,0:35:79.92:0,80,646	0/0:21,0:21:50.93:0,51,419	0/0:24,0:24:59.91:0,60,490	0/0:25,0:25:65.91:0,66,540	0/0:17,0:17:47.91:0,48,391	0/0:28,0:28:77.83:0,78,628	0/0:26,0:26:65.74:0,66,531	0/0:25,0:25:54.01:0,54,513	0/0:26,0:26:68.90:0,69,565	0/0:21,0:21:41.88:0,42,338	0/0:34,0:34:80.84:0,81,660	0/0:13,0:13:35.93:0,36,292	0/0:22,0:23:61.96:0,62,497	0/0:39,0:39:92.84:0,93,761	0/0:27,1:27:45.83:0,46,569	0/0:33,0:33:83.88:0,84,689	0/0:32,1:33:48.88:0,49,604	0/0:32,0:31:89.86:0,90,735	0/0:16,0:15:38.95:0,39,320
chr10	75684710	.	C	CT	700.73	PASS	AB=0.909;AC=6;AF=0.107;AN=56;BaseQRankSum=-2.899;DP=596;FS=33.971;HRun=12;HaplotypeScore=69.1859;InbreedingCoeff=0.2705;MQ=65.39;MQ0=1;MQRankSum=-1.344;QD=6.37;ReadPosRankSum=-2.888;VQSLOD=-0.6998;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,34:40:81.68:756,82,0	0/0:7,0:7:20.86:0,21,151	0/0:16,0:14:8.42:0,8,86	0/1:11,0:9:0.41:0,0,30	0/0:38,0:42:69.77:0,70,532	0/1:20,4:24:16.73:17,0,217	0/1:10,2:12:31.54:32,0,124	0/0:34,1:36:27.12:0,27,455	0/0:19,1:21:33.39:0,33,314	0/0:26,0:30:9.79:0,10,303	0/0:21,0:22:43.73:0,44,312	0/0:19,0:20:43.74:0,44,310	0/0:14,0:14:20.77:0,21,153	0/0:24,1:27:28.52:0,29,354	0/0:21,1:23:23.53:0,24,326	0/0:21,1:22:24.50:0,25,343	0/0:28,1:29:39.40:0,39,450	0/0:14,0:14:35.78:0,36,263	0/0:30,0:29:44.53:0,45,322	0/0:19,0:19:29.64:0,30,212	0/0:15,0:15:26.79:0,27,195	0/0:12,0:13:25.87:0,26,181	0/0:15,0:17:24.84:0,25,165	0/0:9,0:12:21.94:0,22,143	0/0:23,0:24:60.90:0,61,442	0/0:23,0:23:50.68:0,51,372	0/1:20,2:23:18.51:19,0,278	0/0:10,0:10:14.87:0,15,109
chr10	75684898	.	GTTGAATGTCACCCTC	G	10462.17	PASS	AB=0.564;AC=9;AF=0.173;AN=52;BaseQRankSum=13.275;DP=650;FS=1.463;HRun=0;HaplotypeScore=255.5353;InbreedingCoeff=0.5966;MQ=50.32;MQ0=52;MQRankSum=-13.056;QD=95.11;ReadPosRankSum=0.495;VQSLOD=4.4359;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:99:0,132,9294	0/0:10,0:10:30.10:0,30,2078	./.	./.	0/0:31,0:31:90.29:0,90,6229	0/0:19,0:18:54.19:0,54,4045	0/0:15,0:15:41.88:0,42,2913	0/0:34,0:26:78.25:0,78,4808	0/1:3,21:23:99:2726,0,391	0/0:21,0:21:60.21:0,60,4012	0/0:16,0:16:48.16:0,48,3613	0/1:4,15:19:99:1499,0,193	1/1:1,18:19:45.15:2090,45,0	0/0:24,0:24:72.25:0,72,5385	0/0:32,0:30:87.30:0,87,6389	0/0:36,0:35:99:0,99,7222	0/0:34,0:33:96.33:0,96,7016	0/0:14,0:14:42.14:0,42,3074	0/0:32,0:24:66.23:0,66,4664	0/0:30,0:30:90.31:0,90,6702	0/0:33,0:32:87.30:0,87,6323	1/1:0,13:13:39.13:1799,39,0	1/1:0,23:23:57.19:2120,57,0	0/1:4,8:12:99:229,0,428	0/0:18,0:18:54.12:0,54,3818	0/0:22,0:22:63.22:0,63,4473	0/0:21,0:21:57.20:0,57,4198	0/0:9,0:9:27.09:0,27,2029
chr10	75685048	.	T	TC	4541.67	PASS	AB=0.838;AC=21;AF=0.375;AN=56;BaseQRankSum=4.926;DP=891;FS=0.330;HRun=1;HaplotypeScore=93.5398;InbreedingCoeff=-0.4862;MQ=78.28;MQ0=7;MQRankSum=-11.164;QD=6.60;ReadPosRankSum=0.525;VQSLOD=1.5771;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,57:56:99:2126,144,0	0/0:17,0:17:48.16:0,48,623	0/0:33,5:35:0.50:0,1,981	0/0:28,3:28:48.18:0,48,762	0/0:28,5:32:25.44:0,25,960	0/0:17,2:19:6.35:0,6,578	0/1:19,8:26:99:245,0,554	0/1:37,4:40:29.63:30,0,1141	0/1:20,13:32:99:452,0,519	0/1:34,6:39:99:116,0,1099	0/1:29,8:36:79.93:80,0,1016	0/1:21,8:28:99:116,0,599	0/1:21,5:24:26.39:26,0,659	0/1:29,4:32:41.18:41,0,997	0/1:35,10:41:99:152,0,1167	0/1:33,10:42:99:155,0,1132	0/1:26,4:30:26.38:26,0,874	0/0:16,1:17:6.24:0,6,578	0/1:17,6:21:99:120,0,563	0/1:24,2:26:11.48:11,0,842	0/1:43,10:52:99:254,0,1446	0/1:25,3:28:52.73:53,0,842	0/1:19,3:22:29.48:29,0,641	0/1:30,7:36:99:125,0,976	0/1:19,6:25:99:197,0,629	0/1:23,7:30:99:188,0,713	0/0:29,3:30:42.46:0,42,1031	0/0:16,0:16:42.14:0,42,545
chr10	75687447	.	CCATTTCCAGTGACTGCCT	C	1658.27	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.707;DP=666;FS=1.121;HRun=0;HaplotypeScore=301.3594;InbreedingCoeff=0.9911;MQ=89.94;MQ0=0;MQRankSum=-5.884;QD=55.28;ReadPosRankSum=0.623;VQSLOD=2.8775;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:30:36.12:1753,36,0	0/0:6,0:6:18.06:0,18,1005	0/0:24,0:24:72.25:0,72,4857	0/0:33,0:33:90.67:0,91,5154	0/0:24,0:23:63.22:0,63,4536	0/0:27,0:27:78.27:0,78,6010	0/0:28,0:28:84.24:0,84,6142	0/0:28,0:28:75.25:0,75,5524	0/0:30,0:30:87.29:0,87,6887	0/0:24,0:24:72.25:0,72,6262	0/0:11,0:11:33.11:0,33,2334	0/0:27,0:27:81.28:0,81,5896	0/0:27,0:27:81.28:0,81,6585	0/0:28,0:28:84.29:0,84,6778	0/0:28,0:28:84.29:0,84,7215	0/0:23,0:23:69.24:0,69,5368	0/0:26,0:26:72.25:0,72,5595	0/0:13,0:13:36.12:0,36,2781	0/0:34,0:34:96.33:0,96,5621	0/0:18,0:18:54.19:0,54,4048	0/0:39,0:39:99:0,114,8586	0/0:21,0:21:63.22:0,63,4327	0/0:19,0:19:57.20:0,57,4266	0/0:23,0:23:69.24:0,69,5900	0/0:18,0:18:51.17:0,51,3571	0/0:21,0:21:63.20:0,63,4574	0/0:26,0:26:78.27:0,78,6591	0/0:10,0:10:30.10:0,30,2637
chr10	75687709	.	T	TG	266.58	PASS	AB=0.929;AC=12;AF=0.222;AN=54;BaseQRankSum=0.852;DP=292;FS=0.000;HRun=9;HaplotypeScore=38.5666;InbreedingCoeff=0.6246;MQ=76.37;MQ0=4;MQRankSum=-1.211;QD=6.06;ReadPosRankSum=-0.562;VQSLOD=-0.3075;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:26.97:0,27,234	0/0:5,0:5:6:0,6,52	0/0:16,0:9:14.98:0,15,130	0/0:22,0:15:32.76:0,33,285	0/0:8,0:8:11.98:0,12,102	0/0:7,0:7:14.98:0,15,127	0/0:15,0:17:40.04:0,40,324	0/0:17,0:17:29.97:0,30,260	1/1:4,2:6:9.45:87,9,0	0/1:5,1:6:18.18:18,0,89	0/0:5,0:5:9:0,9,78	1/1:3,3:6:5.96:53,6,0	1/1:5,0:5:5.99:48,6,0	0/0:8,0:8:20.99:0,21,182	0/0:6,0:6:14.99:0,15,130	0/0:5,0:5:15:0,15,130	0/0:32,0:32:68.91:0,69,591	0/0:18,0:18:41.97:0,42,360	0/0:11,0:11:23.02:0,23,188	0/0:5,0:5:12:0,12,104	0/0:19,0:20:38:0,38,318	0/1:3,0:3:18.46:18,0,20	1/1:0,2:2:2.88:33,3,0	1/1:2,14:16:15.04:166,15,0	./.	0/0:8,0:9:26.03:0,26,214	0/0:11,0:11:17.96:0,18,155	0/0:8,0:7:18:0,18,156
chr10	75687792	.	AAAT	A	192.75	PASS	AC=8;AF=0.308;AN=26;BaseQRankSum=-0.436;DP=159;FS=0.000;HRun=0;HaplotypeScore=27.0364;InbreedingCoeff=0.5380;MQ=51.37;MQ0=1;MQRankSum=2.317;QD=4.94;ReadPosRankSum=0.069;VQSLOD=0.8363;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:3,0:3:3.01:0,3,53	./.	./.	./.	./.	./.	./.	1/1:2,0:4:6.11:32,6,0	0/0:5,0:5:6.02:0,6,101	./.	./.	./.	./.	./.	0/0:0,0:1:3.01:0,3,39	1/1:14,7:21:12.04:154,12,0	0/0:13,0:13:14.98:0,15,160	0/0:7,0:8:3.01:0,3,39	./.	./.	./.	1/1:5,1:6:2.92:38,3,0	1/1:8,0:8:6.02:77,6,0	0/0:3,0:5:5.95:0,6,57	0/0:5,0:5:5.98:0,6,62	0/0:10,0:10:6.02:0,6,77	0/0:10,0:9:9:0,9,108
chr10	75689884	.	G	GTA	445.51	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=-0.761;DP=355;FS=1.016;HRun=0;HaplotypeScore=52.5627;InbreedingCoeff=0.7353;MQ=79.08;MQ0=4;MQRankSum=0.192;QD=9.48;ReadPosRankSum=-0.043;VQSLOD=2.9896;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:20.84:0,21,151	0/0:4,0:4:12.04:0,12,156	0/1:17,0:10:4.50:19,0,5	0/0:29,0:14:2.80:0,3,13	0/0:9,0:9:27.09:0,27,351	0/0:12,0:12:36.12:0,36,468	0/0:3,0:3:6:0,6,63	0/0:47,0:47:99:0,105,1319	1/1:4,9:13:15.03:251,15,0	0/0:12,0:12:36.11:0,36,458	0/0:16,0:16:38.95:0,39,505	1/1:2,1:3:6.01:72,6,0	1/1:2,3:5:6.02:100,6,0	0/0:15,0:15:42.14:0,42,546	0/0:10,0:10:24.06:0,24,296	0/0:11,0:10:27.09:0,27,350	0/0:17,0:17:48.13:0,48,606	0/0:13,0:13:36.05:0,36,432	0/0:15,0:15:45.12:0,45,550	0/0:13,0:13:30.10:0,30,390	0/0:9,0:9:27.09:0,27,351	1/1:1,1:2:3.01:51,3,0	1/1:1,5:6:6.02:102,6,0	./.	0/0:18,0:18:45.13:0,45,571	0/0:15,0:15:39.13:0,39,505	0/0:19,0:19:42.12:0,42,531	0/0:10,0:10:24.08:0,24,312
chr10	75689919	.	GTA	G	699.97	PASS	AB=0.905;AC=18;AF=0.333;AN=54;BaseQRankSum=6.725;DP=329;FS=4.609;HRun=0;HaplotypeScore=48.1637;InbreedingCoeff=0.4350;MQ=77.19;MQ0=3;MQRankSum=-1.551;QD=6.80;ReadPosRankSum=-2.830;VQSLOD=1.8550;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,2:13:9.44:9,0,361	1/1:1,2:3:6.02:74,6,0	0/1:13,0:4:0.01:0,0,0	0/0:24,0:16:1.40:0,1,5	0/0:9,0:9:21.07:0,21,337	0/0:16,0:16:36.09:0,36,537	0/0:2,0:2:3:0,3,25	0/0:38,2:40:14.23:0,14,975	1/1:3,6:9:18.04:202,18,0	0/0:9,0:9:21.07:0,21,334	0/1:7,2:9:16.13:16,0,263	1/1:0,6:5:15.05:182,15,0	1/1:1,4:5:12.02:129,12,0	0/0:14,0:14:33.10:0,33,514	0/0:8,0:8:18.06:0,18,293	0/0:8,0:7:18.06:0,18,295	0/0:22,0:22:60.16:0,60,905	0/1:10,1:11:7.07:7,0,402	0/1:14,1:14:26.80:27,0,341	0/1:7,1:8:22.16:22,0,155	0/0:8,0:8:9.03:0,9,145	1/1:2,0:2:3:25,3,0	1/1:4,4:8:14.94:178,15,0	./.	0/0:17,2:19:4.93:0,5,573	0/0:12,0:12:24.07:0,24,369	0/0:17,2:19:16.95:0,17,733	0/0:16,0:16:45.13:0,45,712
chr10	75690710	.	GA	G	832.41	PASS	AB=0.909;AC=13;AF=0.232;AN=56;BaseQRankSum=7.971;DP=337;FS=1.233;HRun=11;HaplotypeScore=34.3473;InbreedingCoeff=0.8188;MQ=64.63;MQ0=4;MQRankSum=-0.754;QD=13.87;ReadPosRankSum=2.499;VQSLOD=3.1746;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,4:46:27.65:0,28,1064	0/0:6,0:6:12.03:0,12,128	0/0:6,0:5:5.80:0,6,44	0/0:4,0:1:0:0,0,0	0/0:8,0:8:21.02:0,21,208	0/0:13,0:13:27.07:0,27,288	0/0:12,0:12:27.07:0,27,288	0/0:27,1:28:26.41:0,26,458	1/1:1,7:8:17.98:148,18,0	0/0:10,0:10:27.07:0,27,288	0/0:4,0:4:8.99:0,9,85	1/1:0,9:9:26.97:222,27,0	1/1:1,8:9:20.97:172,21,0	0/0:6,0:6:12.01:0,12,119	0/0:8,0:8:21.03:0,21,210	0/0:10,1:11:27.07:0,27,288	0/0:17,1:18:20.45:0,20,413	0/0:21,2:22:7.81:0,8,481	0/0:20,0:19:47.94:0,48,477	0/0:7,0:6:8.98:0,9,83	0/0:18,0:18:33.07:0,33,344	1/1:1,4:5:11.98:98,12,0	1/1:3,7:10:17.96:148,18,0	1/1:0,9:9:26.97:222,27,0	0/0:6,0:6:12.03:0,12,128	0/0:10,0:9:21.05:0,21,224	0/1:9,1:10:3.55:4,0,171	0/0:12,0:11:30.08:0,30,320
chr10	75691506	.	G	GC	566.74	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.777;DP=629;FS=7.165;HRun=0;HaplotypeScore=62.3526;InbreedingCoeff=0.9201;MQ=71.11;MQ0=0;MQRankSum=-5.764;QD=22.67;ReadPosRankSum=-3.910;VQSLOD=3.6137;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:24:62.53:662,63,0	0/0:9,0:9:27.09:0,27,378	0/0:10,0:10:18.04:0,18,222	0/0:11,0:12:7.59:0,8,125	0/0:16,0:16:48.16:0,48,665	0/0:25,0:25:75.18:0,75,1024	0/0:27,0:27:81.25:0,81,1113	0/0:26,0:26:69.22:0,69,950	0/0:26,0:26:78.25:0,78,1072	0/0:37,0:37:99:0,108,1489	0/0:13,0:13:39.11:0,39,527	0/0:40,0:40:99:0,120,1676	0/0:24,0:24:69.20:0,69,944	0/0:15,0:15:45.15:0,45,629	0/0:20,0:20:60.18:0,60,805	0/0:19,0:19:57.18:0,57,780	0/0:34,0:34:99:0,99,1348	0/0:17,0:17:51.17:0,51,713	0/0:19,0:19:54.16:0,54,736	0/0:13,0:13:36.12:0,36,503	0/0:44,0:44:99:0,126,1738	0/0:27,0:27:75.24:0,75,1022	0/0:19,0:19:57.16:0,57,762	0/0:21,0:21:57.17:0,57,779	0/0:23,0:23:69.23:0,69,963	0/0:23,0:23:66.22:0,66,923	0/0:18,0:18:54.18:0,54,754	0/0:27,0:27:81.27:0,81,1129
chr10	75691805	.	CCTGTATGTATGT	C	607.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.610;DP=777;FS=2.271;HRun=0;HaplotypeScore=281.2351;InbreedingCoeff=0.9996;MQ=62.27;MQ0=4;MQRankSum=-1.140;QD=18.99;ReadPosRankSum=0.377;VQSLOD=2.5172;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,4:32:42.39:703,42,0	0/0:15,0:15:44.32:0,44,1719	0/0:19,0:11:33.02:0,33,319	0/0:17,0:15:39.06:0,39,417	0/0:29,0:29:84.19:0,84,3885	0/0:29,0:29:87.10:0,87,2381	0/0:26,0:26:77.32:0,77,2350	0/0:42,0:42:99:0,126,2314	0/0:17,0:17:48.12:0,48,2164	0/0:41,0:41:99:0,123,4839	0/0:30,0:30:90.06:0,90,3953	0/0:19,0:19:54.13:0,54,2011	0/0:32,0:32:96.22:0,96,4107	0/0:35,0:35:99:0,105,4303	0/0:30,0:30:90.14:0,90,3030	0/0:25,0:25:75.17:0,75,3028	0/0:23,0:23:68.84:0,69,2173	0/0:26,0:26:63.05:0,63,2388	0/0:27,0:26:81.05:0,81,1623	0/0:27,0:27:67.91:0,68,2054	0/0:23,0:23:63.14:0,63,2497	0/0:34,0:33:91.21:0,91,2942	0/0:23,0:23:57.04:0,57,1987	0/0:28,0:28:81.14:0,81,2989	0/0:41,0:40:99:0,114,2391	0/0:27,0:27:81.18:0,81,2660	0/0:38,0:38:99:0,111,3766	0/0:22,0:22:66.04:0,66,1996
chr10	75691806	.	C	CTGTA	8335.67	PASS	AB=0.733;AC=21;AF=0.404;AN=52;BaseQRankSum=-13.791;DP=794;FS=2.538;HRun=0;HaplotypeScore=135.5274;InbreedingCoeff=0.6131;MQ=62.20;MQ0=4;MQRankSum=-0.279;QD=22.65;ReadPosRankSum=0.363;VQSLOD=4.8403;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:11.86:0,12,90	0/0:15,0:15:18.06:0,18,276	./.	./.	0/0:29,0:29:51.17:0,51,781	0/0:28,0:29:24.06:0,24,328	0/0:26,0:27:33.10:0,33,485	0/1:43,0:43:0:0,0,0	0/1:6,11:18:12.85:667,0,13	0/0:41,0:41:51.16:0,51,745	0/0:30,0:30:51.17:0,51,777	1/1:9,9:19:2.16:600,2,0	0/0:32,0:32:57.17:0,57,834	0/0:32,0:34:57.17:0,57,816	0/0:30,0:31:39.12:0,39,571	0/0:23,0:25:39.12:0,39,561	0/0:23,0:23:21.07:0,21,322	1/1:10,17:27:36.12:839,36,0	1/1:23,4:27:15.05:327,15,0	1/1:16,12:28:24.08:560,24,0	1/1:9,15:26:36.12:840,36,0	1/1:18,16:33:42.14:980,42,0	0/1:10,13:24:16.06:600,0,16	0/1:16,13:31:6.83:801,0,7	0/0:18,0:41:60.07:0,60,559	1/1:20,7:27:27.08:583,27,0	1/1:23,17:41:5.21:1074,5,0	0/1:15,7:22:21.88:466,0,22
chr10	75692211	.	TGC	T	696.30	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.050;DP=584;FS=3.201;HRun=0;HaplotypeScore=69.5929;InbreedingCoeff=0.9978;MQ=71.40;MQ0=1;MQRankSum=-1.835;QD=29.01;ReadPosRankSum=0.401;VQSLOD=4.7255;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:54.17:791,54,0	0/0:8,0:8:24.08:0,24,487	0/0:17,0:17:51.17:0,51,1023	0/0:14,0:13:39.13:0,39,744	0/0:22,0:22:66.23:0,66,1341	0/0:20,0:20:60.21:0,60,1207	0/0:17,0:17:51.18:0,51,1025	0/0:49,0:49:99:0,144,2858	0/0:15,0:15:45.15:0,45,902	0/0:25,0:25:72.25:0,72,1463	0/0:28,0:28:84.29:0,84,1707	0/0:20,0:20:60.21:0,60,1208	0/0:18,0:18:54.17:0,54,1060	0/0:20,0:20:60.19:0,60,1177	0/0:20,0:20:60.19:0,60,1183	0/0:17,0:17:48.16:0,48,964	0/0:14,0:14:42.14:0,42,853	0/0:14,0:14:42.12:0,42,815	0/0:27,0:27:78.27:0,78,1585	0/0:33,0:33:96.32:0,96,1910	0/0:24,0:24:72.25:0,72,1451	0/0:22,0:22:66.23:0,66,1341	0/0:22,0:22:66.23:0,66,1314	0/0:16,0:16:48.16:0,48,975	0/0:17,0:17:51.18:0,51,1026	0/0:22,0:22:66.23:0,66,1341	0/0:19,0:19:57.20:0,57,1158	0/0:20,0:20:60.21:0,60,1204
chr10	75694898	.	GAA	G	2195.61	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.543;DP=487;FS=0.458;HRun=12;HaplotypeScore=60.7785;InbreedingCoeff=0.9666;MQ=60.22;MQ0=9;MQRankSum=1.793;QD=17.71;ReadPosRankSum=4.548;VQSLOD=2.4629;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:17:24:0,24,235	0/0:6,0:6:18.06:0,18,262	0/0:13,0:7:17.44:0,17,178	0/0:11,0:4:9.03:0,9,123	0/0:28,0:28:71.69:0,72,996	0/0:13,0:12:33.11:0,33,491	0/0:9,0:10:27.05:0,27,345	0/0:18,0:17:44.59:0,45,586	1/1:3,11:14:23.44:243,23,0	0/0:24,0:23:30.20:0,30,771	0/0:21,0:22:50.66:0,51,722	1/1:2,19:22:38.75:449,39,0	1/1:1,16:17:36.08:366,36,0	0/0:14,1:14:8.50:0,8,414	0/0:13,0:15:41.56:0,42,522	0/0:7,0:8:20.54:0,21,255	0/0:21,0:21:51.17:0,51,741	0/0:15,0:15:33.58:0,34,462	0/0:11,0:11:32.58:0,33,436	0/0:20,0:22:56.16:0,56,760	0/0:26,0:26:72.23:0,72,1049	1/1:3,18:20:51.03:502,51,0	1/1:2,20:21:35.68:365,36,0	1/1:6,22:27:45.06:458,45,0	0/0:14,0:15:41.58:0,42,561	0/0:20,0:21:62.18:0,62,862	0/0:20,0:21:49.18:0,49,662	0/0:8,0:7:15.05:0,15,220
chr10	75697039	.	AT	A	336.45	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.289;DP=451;FS=16.693;HRun=9;HaplotypeScore=42.2514;InbreedingCoeff=0.6849;MQ=71.87;MQ0=0;MQRankSum=-0.243;QD=18.69;ReadPosRankSum=0.534;VQSLOD=2.1678;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:47.98:431,48,0	0/0:9,0:9:27.04:0,27,290	0/0:6,0:6:6.01:0,6,57	0/0:7,0:7:5.88:0,6,47	0/0:26,0:26:78.23:0,78,900	0/0:24,0:24:60.17:0,60,683	0/0:10,0:10:30.09:0,30,346	0/0:28,0:28:69.19:0,69,780	0/0:10,1:11:5.63:0,6,319	0/0:17,0:17:51.15:0,51,589	0/0:32,0:31:78.22:0,78,892	0/0:15,0:15:45.13:0,45,519	0/0:12,0:12:36.09:0,36,405	0/0:9,0:9:27.08:0,27,312	0/0:9,0:9:24.07:0,24,277	0/0:16,0:16:48.14:0,48,554	0/0:22,0:22:54.15:0,54,613	0/0:14,0:14:42.12:0,42,485	0/0:18,0:18:50.73:0,51,553	0/0:25,0:25:72.20:0,72,821	0/0:15,0:15:36.11:0,36,415	0/0:4,0:4:6.02:0,6,69	0/0:17,0:17:51.14:0,51,578	0/0:7,0:7:18.03:0,18,195	0/0:24,0:24:67.07:0,67,755	0/0:17,0:17:51.13:0,51,571	0/0:27,0:27:81.22:0,81,916	0/0:12,0:12:21.06:0,21,242
chr10	75697682	.	A	ATAAT	554.99	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.996;DP=486;FS=5.145;HRun=0;HaplotypeScore=95.4129;InbreedingCoeff=0.8198;MQ=66.12;MQ0=13;MQRankSum=-3.639;QD=23.12;ReadPosRankSum=2.737;VQSLOD=3.1691;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,8:24:11.80:641,12,0	0/0:9,0:9:24.04:0,24,426	0/0:37,0:16:33.20:0,33,528	0/0:37,0:20:19.03:0,19,402	0/0:26,0:26:78.07:0,78,1163	0/0:21,0:21:57.16:0,57,958	0/0:17,0:17:45.11:0,45,746	0/0:23,0:23:61.04:0,61,921	0/0:7,0:7:15.03:0,15,204	0/0:17,0:16:45.15:0,45,815	0/0:18,0:18:51.11:0,51,919	0/0:8,0:8:24.07:0,24,328	0/0:17,0:17:25.38:0,25,346	0/0:7,0:6:15.04:0,15,202	0/0:17,0:15:45.08:0,45,775	0/0:12,0:11:33.11:0,33,630	0/0:33,0:31:75.25:0,75,1403	0/0:20,0:19:53.77:0,54,917	0/0:27,0:26:78.24:0,78,1379	0/0:19,0:19:57.14:0,57,941	0/0:7,0:7:18.06:0,18,347	0/0:13,0:12:33.01:0,33,425	0/0:12,0:12:33.08:0,33,485	0/0:7,0:6:5.41:0,5,53	0/0:14,0:13:30.10:0,30,494	0/0:12,0:12:33.11:0,33,594	0/0:14,0:14:39.11:0,39,681	0/0:11,0:8:24.08:0,24,469
chr10	75697685	.	A	ATAAT	687.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.794;DP=500;FS=2.309;HRun=0;HaplotypeScore=102.4766;InbreedingCoeff=0.8808;MQ=68.32;MQ0=12;MQRankSum=-4.995;QD=31.26;ReadPosRankSum=2.628;VQSLOD=3.4766;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,12:22:23.78:781,24,0	0/0:8,0:8:24.07:0,24,402	0/0:38,0:17:50.59:0,51,554	0/0:39,0:22:42.46:0,42,420	0/0:27,0:27:70.42:0,70,1121	0/0:19,0:19:57.15:0,57,960	0/0:17,0:17:42.09:0,42,694	0/0:26,0:26:66.68:0,67,1104	0/0:9,0:9:15.89:0,16,185	0/0:18,0:17:47.33:0,47,757	0/0:17,0:17:48.15:0,48,873	0/0:9,0:9:23.96:0,24,291	0/0:17,0:17:25.14:0,25,337	0/0:7,0:6:17.96:0,18,211	0/0:18,0:16:40.34:0,40,709	0/0:12,0:11:33.09:0,33,572	0/0:34,0:32:79.27:0,79,1331	0/0:20,0:19:50.66:0,51,911	0/0:27,0:26:75.25:0,75,1316	0/0:19,0:19:51.62:0,52,794	0/0:9,0:9:21.06:0,21,367	0/0:15,0:14:11.86:0,12,287	0/0:14,0:14:36.01:0,36,490	0/0:8,0:7:8.39:0,8,74	0/0:14,0:13:32.91:0,33,437	0/0:12,0:12:36.03:0,36,572	0/0:16,0:16:36.12:0,36,616	0/0:9,0:8:24.05:0,24,439
chr10	75698463	.	ATAT	A	804.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.075;DP=607;FS=0.919;HRun=0;HaplotypeScore=80.1770;InbreedingCoeff=0.9822;MQ=72.60;MQ0=1;MQRankSum=-0.422;QD=36.55;ReadPosRankSum=1.236;VQSLOD=4.3791;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:51.17:899,51,0	0/0:12,0:12:36.12:0,36,808	0/0:19,0:18:47.04:0,47,990	0/0:10,0:9:24.55:0,25,476	0/0:36,0:36:99:0,108,2372	0/0:29,0:29:87.30:0,87,2042	0/0:12,0:12:36.12:0,36,844	0/0:40,0:40:99:0,117,2610	0/0:16,0:16:45.15:0,45,1012	0/0:31,0:31:87.30:0,87,2023	0/0:33,0:33:99:0,99,2324	0/0:17,0:17:51.16:0,51,1138	0/0:27,0:27:81.26:0,81,1850	0/0:17,0:17:51.17:0,51,1180	0/0:25,0:25:72.25:0,72,1644	0/0:14,0:14:42.13:0,42,925	0/0:18,0:18:48.16:0,48,1043	0/0:20,0:20:57.20:0,57,1339	0/0:25,0:25:75.21:0,75,1624	0/0:30,0:30:90.30:0,90,2026	0/0:14,0:14:39.11:0,39,874	0/0:12,0:12:36.11:0,36,798	0/0:34,0:34:99:0,102,2307	0/0:5,0:5:15.05:0,15,355	0/0:20,0:20:60.19:0,60,1279	0/0:19,0:19:54.18:0,54,1230	0/0:28,0:28:84.29:0,84,1902	0/0:22,0:22:66.23:0,66,1560
chr10	75698933	.	GA	G	3162.31	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.731;DP=512;FS=7.133;HRun=2;HaplotypeScore=49.2743;InbreedingCoeff=0.9959;MQ=73.63;MQ0=0;MQRankSum=0.549;QD=32.60;ReadPosRankSum=3.283;VQSLOD=3.1702;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.96:0,58,883	0/0:15,0:15:45.15:0,45,675	0/0:12,0:12:29.97:0,30,444	0/0:14,0:14:39.12:0,39,538	0/0:23,0:23:69.23:0,69,1034	0/0:22,0:22:63.21:0,63,943	0/0:21,0:21:63.21:0,63,944	0/0:31,0:31:93.31:0,93,1375	1/1:0,24:24:66.21:857,66,0	0/0:17,0:17:51.17:0,51,764	0/0:14,0:14:42.14:0,42,629	1/1:0,22:22:57.19:740,57,0	1/1:0,20:20:57.19:740,57,0	0/0:14,0:14:42.14:0,42,630	0/0:18,0:18:51.17:0,51,764	0/0:15,0:15:45.15:0,45,669	0/0:15,0:15:42.13:0,42,608	0/0:10,0:10:30.10:0,30,450	0/0:28,0:28:81.24:0,81,1158	0/0:27,0:27:78.26:0,78,1161	0/0:20,0:20:60.20:0,60,899	1/1:0,5:5:15.05:195,15,0	1/1:0,8:8:24.08:312,24,0	1/1:0,18:18:39.13:506,39,0	0/0:9,0:9:27.09:0,27,404	0/0:26,0:26:78.24:0,78,1115	0/0:27,0:27:81.27:0,81,1214	0/0:15,0:15:42.11:0,42,599
chr10	75699735	.	A	AG	890.73	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.787;DP=562;FS=0.000;HRun=1;HaplotypeScore=55.7564;InbreedingCoeff=0.9911;MQ=89.22;MQ0=1;MQRankSum=-1.495;QD=35.63;ReadPosRankSum=0.094;VQSLOD=3.3695;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:66.22:986,66,0	0/0:6,0:6:18.06:0,18,234	0/0:27,0:27:72.22:0,72,899	0/0:19,0:19:51.16:0,51,649	0/0:25,0:25:72.23:0,72,935	0/0:16,0:16:33.11:0,33,428	0/0:19,0:19:54.18:0,54,701	0/0:30,0:30:87.26:0,87,1102	0/0:22,0:22:66.21:0,66,856	0/0:24,0:24:72.23:0,72,935	0/0:15,0:15:42.14:0,42,545	0/0:25,0:25:66.21:0,66,857	0/0:18,0:18:54.16:0,54,687	0/0:14,0:14:36.12:0,36,466	0/0:24,0:24:63.19:0,63,804	0/0:17,0:17:51.15:0,51,647	0/0:17,0:17:51.17:0,51,661	0/0:20,0:20:54.18:0,54,701	0/0:24,0:24:60.17:0,60,761	0/0:17,0:17:48.16:0,48,623	0/0:20,0:20:60.17:0,60,763	0/0:19,0:19:57.19:0,57,740	0/0:22,0:22:63.20:0,63,818	0/0:22,0:22:66.21:0,66,857	0/0:21,0:21:60.20:0,60,779	0/0:24,0:24:72.23:0,72,935	0/0:20,0:18:51.17:0,51,662	0/0:10,0:10:30.10:0,30,390
chr10	75700019	.	G	GT	255.41	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.733;DP=767;FS=0.699;HRun=1;HaplotypeScore=74.8824;InbreedingCoeff=0.9171;MQ=54.98;MQ0=13;MQRankSum=-8.325;QD=7.09;ReadPosRankSum=-2.905;VQSLOD=-0.4678;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,7:35:79.26:350,79,0	0/0:9,0:9:27.08:0,27,362	0/0:11,0:3:9.03:0,9,126	0/0:23,0:6:12.03:0,12,155	0/0:22,0:22:60.14:0,60,799	0/0:20,0:20:54.18:0,54,755	0/0:29,0:28:45.12:0,45,595	0/0:35,0:32:93.28:0,93,1273	0/0:29,0:29:84.28:0,84,1175	0/0:36,0:36:99:0,108,1501	0/0:16,0:16:38.80:0,39,544	0/0:30,0:30:90.30:0,90,1259	0/0:23,0:23:69.23:0,69,963	0/0:33,0:33:93.30:0,93,1284	0/0:28,0:28:84.28:0,84,1173	0/0:39,0:39:99:0,117,1621	0/0:45,0:45:99:0,126,1745	0/0:31,0:32:92.12:0,92,1260	0/0:25,0:17:48.16:0,48,671	0/0:24,0:24:66.22:0,66,918	0/0:59,0:54:99:0,144,2014	0/0:19,0:19:54.17:0,54,731	0/0:13,0:13:33.11:0,33,460	0/0:44,0:43:99:0,129,1804	0/0:26,0:25:69.23:0,69,964	0/0:22,0:22:66.19:0,66,903	0/0:27,0:27:81.27:0,81,1133	0/0:12,0:11:33.11:0,33,461
chr10	75702840	.	TA	T	1276.32	PASS	AB=0.782;AC=13;AF=0.232;AN=56;BaseQRankSum=8.434;DP=613;FS=3.494;HRun=14;HaplotypeScore=72.9127;InbreedingCoeff=0.4584;MQ=69.67;MQ0=4;MQRankSum=-0.075;QD=6.97;ReadPosRankSum=4.415;VQSLOD=2.9342;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:40.77:0,41,595	0/0:8,1:9:0.43:0,0,142	0/1:24,0:14:14.62:15,0,69	0/0:17,0:13:8.22:0,8,58	0/0:27,2:30:24.70:0,25,483	0/0:25,2:29:27.56:0,28,506	0/0:21,0:21:44.19:0,44,343	0/0:24,1:28:32.14:0,32,431	1/1:5,13:19:6.88:183,7,0	0/0:20,2:21:30.36:0,30,409	0/0:29,3:34:12.36:0,12,562	0/1:4,16:21:6.03:244,0,6	0/1:8,20:28:21.08:255,0,21	0/0:15,1:17:5.41:0,5,198	0/0:21,1:23:37.53:0,38,457	0/0:18,0:21:53.65:0,54,451	0/0:20,0:22:27.06:0,27,338	0/0:8,0:8:19.02:0,19,147	0/1:16,2:18:3.67:4,0,211	0/0:26,0:27:62.65:0,63,537	0/0:13,1:14:18.45:0,18,310	1/1:6,9:16:8.50:180,8,0	1/1:6,14:22:39.04:239,39,0	1/1:6,14:21:48.90:314,49,0	0/1:12,2:14:5.27:5,0,225	0/0:26,0:27:59.95:0,60,531	0/0:27,5:32:26.12:0,26,508	0/0:14,0:14:12.48:0,12,248
chr10	75702989	.	T	TAA	7164.27	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-13.876;DP=593;FS=2.137;HRun=1;HaplotypeScore=64.6374;InbreedingCoeff=0.9989;MQ=76.16;MQ0=0;MQRankSum=-5.903;QD=51.54;ReadPosRankSum=5.076;VQSLOD=4.8451;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:54.14:1005,54,0	0/0:7,0:7:21.07:0,21,322	0/0:15,0:15:42.13:0,42,603	0/0:12,0:12:36.07:0,36,489	0/0:37,0:37:99:0,108,1650	0/0:28,0:28:84.29:0,84,1286	0/0:22,0:22:66.19:0,66,964	0/0:39,0:39:99:0,105,1512	1/1:0,20:20:57.20:1101,57,0	0/0:23,0:23:63.20:0,63,964	0/0:24,0:24:72.23:0,72,1081	1/1:0,22:21:57.20:1101,57,0	1/1:1,16:17:42.14:812,42,0	0/0:14,0:14:42.13:0,42,622	0/0:24,0:24:71.81:0,72,1040	0/0:20,0:20:60.18:0,60,877	0/0:10,0:10:27.09:0,27,413	0/0:11,0:11:33.11:0,33,505	0/0:26,0:26:75.24:0,75,1109	0/0:20,0:20:60.19:0,60,896	0/0:25,0:25:72.24:0,72,1101	1/1:0,20:20:57.15:1063,57,0	1/1:1,24:25:75.26:1444,75,0	1/1:0,12:13:33.11:637,33,0	0/0:23,0:23:69.20:0,69,992	0/0:29,0:29:84.29:0,84,1285	0/0:30,0:30:90.31:0,90,1376	0/0:15,0:15:45.10:0,45,623
chr10	75705841	.	T	TC	6714.44	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-14.224;DP=614;FS=0.732;HRun=0;HaplotypeScore=58.5949;InbreedingCoeff=0.9998;MQ=81.16;MQ0=0;MQRankSum=-1.343;QD=45.06;ReadPosRankSum=3.384;VQSLOD=4.8978;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:63.21:1007,63,0	0/0:11,0:11:33.11:0,33,462	0/0:21,0:21:63.21:0,63,880	0/0:12,0:12:32.91:0,33,369	0/0:30,0:30:90.26:0,90,1218	0/0:21,0:21:63.21:0,63,881	0/0:22,0:22:66.22:0,66,922	0/0:31,0:31:90.27:0,90,1190	1/1:0,30:30:87.30:1391,87,0	0/0:18,0:18:54.18:0,54,755	0/0:20,0:20:60.19:0,60,820	1/1:0,20:20:60.20:959,60,0	1/1:0,25:25:72.25:1151,72,0	0/0:26,0:26:78.26:0,78,1091	0/0:28,0:28:84.28:0,84,1175	0/0:20,0:20:57.16:0,57,762	0/0:34,0:34:99:0,102,1419	0/0:28,0:28:84.25:0,84,1155	0/0:33,0:33:99:0,99,1347	0/0:15,0:15:42.13:0,42,570	0/0:18,0:18:54.18:0,54,755	1/1:1,15:16:39.13:624,39,0	1/1:0,20:20:60.20:959,60,0	1/1:0,14:14:39.13:624,39,0	0/0:14,0:14:39.13:0,39,545	0/0:28,0:27:84.27:0,84,1157	0/0:24,0:24:72.24:0,72,1005	0/0:11,0:11:30.57:0,31,415
chr10	75706300	.	G	GA	890.42	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.098;DP=587;FS=8.119;HRun=9;HaplotypeScore=60.1643;InbreedingCoeff=0.9695;MQ=71.35;MQ0=0;MQRankSum=-1.565;QD=24.73;ReadPosRankSum=0.597;VQSLOD=4.3196;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:36:89.40:985,89,0	0/0:5,0:5:15:0,15,130	0/0:20,0:19:36.86:0,37,313	0/0:19,0:19:26.58:0,27,239	0/0:26,1:26:44.77:0,45,610	0/0:26,0:26:74.95:0,75,643	0/0:21,0:21:44.97:0,45,390	0/0:38,1:39:62.77:0,63,768	0/0:16,0:16:35.98:0,36,312	0/0:17,0:17:25.64:0,26,391	0/0:19,0:19:47.98:0,48,417	0/0:24,0:24:64.54:0,65,551	0/0:12,0:12:32.99:0,33,286	0/0:17,0:17:50.97:0,51,439	0/0:22,0:22:56.97:0,57,495	0/0:22,0:22:62.99:0,63,547	0/0:25,0:25:62.95:0,63,542	0/0:19,0:19:56.97:0,57,489	0/0:14,0:14:35.96:0,36,308	0/0:26,0:26:62.95:0,63,542	0/0:27,0:27:62.98:0,63,547	0/0:17,0:17:38.95:0,39,335	0/0:10,0:10:20.99:0,21,182	0/0:17,0:17:50.94:0,51,433	0/0:23,0:23:65.96:0,66,568	0/0:25,0:25:65.94:0,66,564	0/0:33,0:33:77.96:0,78,677	0/0:8,0:8:18:0,18,156
chr10	75706530	.	CTG	C	452.20	PASS	AB=0.962;AC=17;AF=0.304;AN=56;BaseQRankSum=-4.267;DP=525;FS=9.556;HRun=0;HaplotypeScore=87.1633;InbreedingCoeff=0.1750;MQ=65.42;MQ0=18;MQRankSum=2.940;QD=2.11;ReadPosRankSum=-1.316;VQSLOD=0.5780;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:28:26.63:0,27,211	0/1:8,0:8:16.39:16,0,36	0/0:27,0:20:3.01:0,3,33	0/0:22,0:16:3.01:0,3,42	0/1:10,11:20:0:0,0,0	0/1:21,0:21:8.61:9,0,120	0/1:16,0:16:45.46:45,0,95	1/1:23,0:22:6:55,6,0	0/0:21,0:16:8.91:0,9,65	1/1:15,0:15:8.99:77,9,0	1/1:7,0:6:8.89:65,9,0	0/0:18,0:17:11.41:0,11,80	0/0:14,0:14:20.44:0,20,137	0/0:18,0:17:7.29:0,7,133	0/0:18,0:18:29.95:0,30,246	1/1:10,0:10:11.97:97,12,0	0/0:28,0:27:12.73:0,13,208	0/0:16,0:14:8.95:0,9,67	0/0:15,0:15:5.93:0,6,40	0/1:14,0:14:4.78:96,0,5	0/1:28,0:27:10.20:10,0,214	0/0:21,0:18:8.98:0,9,73	0/0:13,0:12:5.84:0,6,49	0/0:24,0:23:2.99:0,3,24	0/1:14,0:14:6.06:93,0,6	0/1:20,0:20:22.41:22,0,76	0/0:25,0:23:6.87:0,7,189	0/1:17,0:17:26.84:27,0,141
chr10	75706568	.	G	GTGTGTGTGTGTGTGTGAC	1474.47	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=3.704;DP=467;FS=2.108;HRun=0;HaplotypeScore=194.8649;InbreedingCoeff=0.6152;MQ=46.06;MQ0=23;MQRankSum=-1.021;QD=9.51;ReadPosRankSum=-3.946;VQSLOD=1.1757;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:31:99:277,0,202	0/0:4,0:4:6.49:0,6,308	1/1:2,0:1:3.01:37,3,0	./.	0/1:23,0:22:0:0,0,0	0/0:16,0:16:28.50:0,28,1168	0/0:15,0:15:32.82:0,33,936	0/0:15,0:15:34.60:0,35,224	1/1:19,0:13:12.06:181,12,0	0/0:10,0:10:29.99:0,30,660	0/0:11,0:9:7.96:0,8,428	1/1:19,0:18:5.85:451,6,0	1/1:14,0:14:8.15:560,8,0	0/0:22,0:20:11.29:0,11,984	0/0:20,0:19:10.29:0,10,617	0/0:15,0:15:11.44:0,11,438	0/0:30,0:28:72.59:0,73,1875	0/0:17,0:15:44.28:0,44,875	0/0:8,0:8:19.71:0,20,269	0/0:15,0:14:24.07:0,24,814	0/0:40,0:37:51.14:0,51,1694	0/0:10,0:7:2.18:0,2,20	1/1:7,0:6:8.37:83,8,0	1/1:14,7:23:11.32:38,11,0	0/0:15,0:15:14.64:0,15,586	0/0:25,0:25:66.22:0,66,1149	0/0:23,0:21:42.14:0,42,1360	0/1:9,0:10:11.29:11,0,964
chr10	75708467	.	TACACAC	T	5083.72	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.937;DP=696;FS=0.452;HRun=0;HaplotypeScore=156.3118;InbreedingCoeff=0.9963;MQ=60.09;MQ0=9;MQRankSum=-12.793;QD=28.88;ReadPosRankSum=0.941;VQSLOD=4.6754;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,17:43:45:822,45,0	0/0:12,0:14:30.09:0,30,814	0/0:40,0:21:20.10:0,20,506	0/0:46,0:29:23.11:0,23,468	0/0:26,0:26:45.15:0,45,1405	0/0:16,0:17:39.13:0,39,1165	0/0:18,0:18:42.12:0,42,1250	0/0:23,0:23:26.25:0,26,712	1/1:6,19:26:51.17:1051,51,0	0/0:31,0:33:73.13:0,73,2185	0/0:11,0:12:27.09:0,27,844	1/1:4,9:16:30.10:567,30,0	1/1:6,14:19:33.09:694,33,0	0/0:25,0:30:81.28:0,81,2300	0/0:17,0:18:51.17:0,51,1448	0/0:27,0:27:57.15:0,57,1588	0/0:25,0:26:69.24:0,69,2048	0/0:20,0:22:45.15:0,45,1243	0/0:18,0:18:21.06:0,21,478	0/0:23,0:24:42.14:0,42,1275	0/0:37,0:39:87.30:0,87,2622	1/1:6,18:24:44.78:843,45,0	1/1:11,18:30:30.09:610,30,0	1/1:6,11:17:23.82:497,24,0	0/0:18,0:20:45.15:0,45,1254	0/0:28,0:30:69.23:0,69,1941	0/0:24,0:25:57.19:0,57,1723	0/0:9,0:9:24.08:0,24,793
chr10	75709139	.	TA	T	2191.33	PASS	AB=0.962;AC=16;AF=0.286;AN=56;BaseQRankSum=9.910;DP=354;FS=12.899;HRun=8;HaplotypeScore=51.0047;InbreedingCoeff=0.8776;MQ=79.04;MQ0=0;MQRankSum=-6.092;QD=17.82;ReadPosRankSum=2.146;VQSLOD=2.2717;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:14:35.96:328,36,0	0/0:4,0:4:9.03:0,9,109	0/0:15,0:15:36.09:0,36,402	0/1:13,0:13:1.17:1,0,259	0/0:10,0:10:27.08:0,27,326	0/0:8,0:8:18.05:0,18,215	0/0:17,0:17:42.08:0,42,490	0/0:26,0:25:72.20:0,72,857	1/1:2,17:19:51.08:492,51,0	0/0:9,0:9:24.07:0,24,290	0/0:11,0:11:21.06:0,21,254	1/1:0,12:12:36.06:347,36,0	1/1:5,16:21:48.03:454,48,0	0/0:11,0:11:33.06:0,33,382	0/0:13,0:13:36.10:0,36,427	0/0:9,0:9:24.07:0,24,290	0/0:17,1:18:22.26:0,22,466	0/0:14,0:14:39.10:0,39,459	0/0:15,0:14:36.02:0,36,386	0/0:8,0:8:24.07:0,24,290	0/0:7,0:8:18.06:0,18,217	1/1:0,11:11:30.05:289,30,0	1/1:2,11:13:30:280,30,0	1/1:2,6:8:20.98:193,21,0	0/0:17,0:17:39.10:0,39,457	0/1:11,1:12:1.86:2,0,253	0/0:10,0:10:27.07:0,27,314	0/0:8,0:8:21.06:0,21,254
chr10	75709182	.	C	CT	1328.28	PASS	AB=0.928;AC=17;AF=0.304;AN=56;BaseQRankSum=9.833;DP=248;FS=2.185;HRun=3;HaplotypeScore=62.3427;InbreedingCoeff=0.6113;MQ=71.30;MQ0=2;MQRankSum=-6.730;QD=12.19;ReadPosRankSum=3.704;VQSLOD=2.1423;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,16:23:49.86:401,50,0	0/0:2,0:2:5.74:0,6,35	0/0:21,0:12:5.77:0,6,113	0/1:9,0:8:12.31:12,0,93	0/0:6,0:6:1.48:0,1,6	0/0:5,0:5:8.98:0,9,73	0/0:9,0:9:26.84:0,27,208	0/0:11,0:11:14.97:0,15,127	1/1:5,4:11:20.67:180,21,0	0/0:4,0:4:5.96:0,6,44	0/0:5,0:5:11.98:0,12,98	1/1:2,7:11:26.52:226,27,0	1/1:6,5:11:20.99:195,21,0	0/1:6,1:7:9.53:10,0,47	0/0:8,0:8:14.04:0,14,109	0/0:6,0:6:14.84:0,15,106	0/0:15,0:15:38.86:0,39,314	0/0:9,0:9:23.98:0,24,208	0/0:10,0:10:20.96:0,21,175	0/0:3,0:3:2.97:0,3,26	0/0:8,0:8:18.38:0,18,136	1/1:5,3:8:14.99:141,15,0	1/1:3,7:10:20.58:167,21,0	1/1:0,7:8:19.39:175,19,0	0/0:9,0:9:14.95:0,15,121	0/1:9,1:10:13.28:13,0,102	0/0:2,0:2:2.87:0,3,15	0/0:6,0:6:14.93:0,15,118
chr10	75710256	.	TTAA	T	113.58	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=2.677;DP=384;FS=13.995;HRun=0;HaplotypeScore=45.2578;InbreedingCoeff=0.5218;MQ=41.85;MQ0=40;MQRankSum=1.310;QD=5.68;ReadPosRankSum=1.789;VQSLOD=-0.2035;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:19:14.07:201,14,0	0/0:8,0:6:15.01:0,15,224	./.	0/0:6,0:1:2.88:0,3,15	0/0:13,0:12:20.87:0,21,194	0/0:12,0:10:21.06:0,21,358	0/0:11,0:11:21.80:0,22,270	0/0:40,0:35:95.38:0,95,1167	0/0:3,0:3:5.95:0,6,79	0/0:17,0:15:44.95:0,45,624	0/0:11,0:10:27.09:0,27,416	0/0:10,0:8:14.97:0,15,220	0/0:13,0:10:18:0,18,263	0/0:7,0:6:10.85:0,11,173	0/0:17,0:16:38.96:0,39,512	0/0:7,0:6:12.04:0,12,194	0/0:31,0:25:55.92:0,56,853	0/0:21,0:17:27.04:0,27,630	0/0:17,0:14:35.99:0,36,458	0/0:8,0:6:15.05:0,15,261	0/0:3,0:3:5.98:0,6,60	0/0:1,0:1:2.97:0,3,20	0/0:7,0:6:9.03:0,9,180	0/0:6,0:5:9.03:0,9,183	0/0:13,0:13:31.30:0,31,397	0/0:21,0:18:50.87:0,51,590	0/0:25,0:25:65.83:0,66,831	0/0:32,0:24:72.08:0,72,1260
chr10	75711423	.	T	TA	534.15	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.727;DP=469;FS=5.197;HRun=11;HaplotypeScore=56.4079;InbreedingCoeff=0.7652;MQ=65.61;MQ0=1;MQRankSum=-0.387;QD=12.42;ReadPosRankSum=2.228;VQSLOD=3.3731;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,34:43:28.76:628,29,0	0/0:7,0:7:17.92:0,18,137	0/0:22,0:14:16.71:0,17,121	0/0:5,0:5:10.77:0,11,76	0/0:25,1:26:23.24:0,23,364	0/0:19,1:20:11.35:0,11,267	0/0:13,0:13:29.86:0,30,229	0/0:26,0:26:47.73:0,48,363	0/0:14,0:14:25.41:0,25,188	0/0:21,0:21:42.66:0,43,326	0/0:17,1:18:11.38:0,11,268	0/0:17,0:17:29.82:0,30,227	0/0:7,0:7:14.92:0,15,116	0/0:2,0:2:5.98:0,6,46	0/0:15,0:15:32.79:0,33,247	0/0:14,0:13:29.87:0,30,231	0/0:25,0:25:56.42:0,56,435	0/0:25,0:25:53.70:0,54,411	0/0:24,0:25:46.82:0,47,352	0/0:19,0:19:41.37:0,41,312	0/0:7,0:7:17.91:0,18,139	0/0:6,0:6:14.93:0,15,114	0/0:7,0:7:14.94:0,15,116	0/0:10,0:10:31.84:0,32,227	0/0:17,0:17:47.80:0,48,369	0/0:28,0:28:80.54:0,81,616	0/0:13,0:13:26.84:0,27,207	0/0:15,0:15:41.82:0,42,325
chr10	75716379	.	GTGAA	G	5200.09	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.888;DP=702;FS=5.057;HRun=0;HaplotypeScore=116.0260;InbreedingCoeff=0.9994;MQ=92.98;MQ0=2;MQRankSum=-3.112;QD=44.45;ReadPosRankSum=4.796;VQSLOD=5.3470;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.31:0,90,2357	0/0:8,0:8:24.08:0,24,651	0/0:30,0:29:80.90:0,81,1888	0/0:31,0:31:90.26:0,90,2158	0/0:31,0:31:90.31:0,90,2465	0/0:36,0:36:99:0,105,2816	0/0:13,0:13:39.13:0,39,1069	0/0:39,0:39:99:0,114,3056	1/1:0,21:21:57.19:1084,57,0	0/0:30,0:30:84.29:0,84,2276	0/0:14,0:14:42.14:0,42,1151	1/1:0,17:18:48.16:928,48,0	1/1:2,26:28:51.17:984,51,0	0/0:23,0:23:63.22:0,63,1658	0/0:37,0:37:99:0,105,2756	0/0:29,0:29:87.30:0,87,2360	0/0:18,0:18:51.18:0,51,1379	0/0:13,0:13:36.12:0,36,908	0/0:24,0:24:69.24:0,69,1846	0/0:37,0:37:99:0,105,2785	0/0:33,0:33:99:0,99,2627	1/1:2,16:17:36.12:697,36,0	1/1:1,17:17:45.07:809,45,0	1/1:0,14:14:36.12:698,36,0	0/0:25,0:25:75.22:0,75,1938	0/0:34,0:34:99:0,102,2652	0/0:40,0:39:99:0,120,3235	0/0:10,0:10:30.10:0,30,822
chr10	75717213	.	A	AG	2800.51	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-6.658;DP=597;FS=0.000;HRun=4;HaplotypeScore=64.4212;InbreedingCoeff=0.9545;MQ=75.07;MQ0=1;MQRankSum=0.307;QD=26.93;ReadPosRankSum=2.968;VQSLOD=2.8548;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:86.84:0,87,947	0/0:9,0:9:24.06:0,24,264	0/0:26,0:17:14.56:0,15,179	0/0:19,0:16:19.60:0,20,188	0/0:30,0:30:72.42:0,72,805	0/0:25,0:25:72:0,72,718	0/0:16,0:16:39.05:0,39,404	0/0:27,0:27:66.14:0,66,703	1/1:4,17:21:38.56:530,39,0	0/0:23,0:23:60.14:0,60,659	0/0:27,0:27:81.03:0,81,842	1/1:1,14:15:24.08:328,24,0	1/1:1,18:19:51.17:696,51,0	0/0:14,0:14:41.31:0,41,432	0/0:16,0:16:42.10:0,42,463	0/0:22,1:23:28.24:0,28,685	0/0:19,0:19:51.06:0,51,541	0/0:29,0:29:77.98:0,78,787	0/0:29,0:28:60.06:0,60,685	0/0:25,0:25:72.14:0,72,770	0/0:5,0:5:15.04:0,15,170	1/1:2,18:20:44.88:700,45,0	1/1:2,21:23:53.99:687,54,0	1/1:1,5:6:3.01:41,3,0	0/0:24,0:24:69.08:0,69,715	0/0:29,0:29:87.18:0,87,936	0/0:39,0:39:99:0,105,1125	0/0:7,0:8:23.73:0,24,239
chr10	75718720	.	GTCA	G	4499.44	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.735;DP=620;FS=0.855;HRun=0;HaplotypeScore=91.3459;InbreedingCoeff=0.9996;MQ=88.33;MQ0=0;MQRankSum=-2.298;QD=39.13;ReadPosRankSum=2.725;VQSLOD=5.8786;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,2436	0/0:12,0:12:33.11:0,33,726	0/0:28,0:28:69.24:0,69,1452	0/0:25,0:25:61.09:0,61,1300	0/0:22,0:22:60.21:0,60,1282	0/0:17,0:17:48.16:0,48,1050	0/0:27,0:27:78.25:0,78,1632	0/0:22,0:22:54.18:0,54,1136	1/1:2,11:13:33.11:530,33,0	0/0:33,0:33:93.30:0,93,1933	0/0:11,0:11:30.10:0,30,660	1/1:2,21:23:60.20:955,60,0	1/1:2,18:20:42.14:675,42,0	0/0:19,0:19:57.20:0,57,1255	0/0:27,0:27:78.25:0,78,1659	0/0:21,0:21:57.20:0,57,1254	0/0:22,0:22:66.23:0,66,1437	0/0:27,0:27:81.26:0,81,1735	0/0:29,0:29:69.24:0,69,1479	0/0:17,0:17:48.16:0,48,1055	0/0:35,0:35:99:0,102,2210	1/1:0,19:19:51.17:797,51,0	1/1:0,13:13:30.10:482,30,0	1/1:1,26:27:66.23:1060,66,0	0/0:23,0:23:66.22:0,66,1396	0/0:23,0:23:66.23:0,66,1446	0/0:16,0:16:42.14:0,42,925	0/0:12,0:12:36.12:0,36,770
chr10	75719302	.	T	TA	920.32	PASS	AB=0.872;AC=12;AF=0.214;AN=56;BaseQRankSum=6.834;DP=549;FS=3.563;HRun=11;HaplotypeScore=82.9061;InbreedingCoeff=0.6328;MQ=73.12;MQ0=2;MQRankSum=-6.363;QD=6.62;ReadPosRankSum=-1.355;VQSLOD=2.1074;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:80.57:0,81,611	0/0:8,0:8:11.91:0,12,91	0/0:29,0:14:14.44:0,14,114	0/1:34,0:16:12.91:13,0,17	0/0:20,0:20:43.29:0,43,297	0/0:18,0:18:41.78:0,42,319	0/0:15,0:15:31.76:0,32,220	0/0:28,0:28:65.22:0,65,481	0/1:12,3:15:12.20:164,0,12	0/0:28,0:28:52.54:0,53,380	0/0:14,0:15:31.80:0,32,231	0/1:9,5:14:2.49:128,0,2	1/1:6,3:10:17.73:145,18,0	0/0:24,0:24:36.81:0,37,347	0/0:23,0:23:53.73:0,54,410	0/0:17,0:18:42.66:0,43,290	0/0:20,0:21:43.76:0,44,319	0/0:16,0:17:37.76:0,38,272	0/1:19,1:20:1.08:1,0,290	0/0:12,0:12:23.86:0,24,183	0/0:4,0:4:11.95:0,12,91	1/1:6,9:15:6.94:217,7,0	1/1:6,7:13:24.04:235,24,0	1/1:6,9:15:17.78:183,18,0	0/0:23,1:26:37.27:0,37,450	0/0:27,0:28:58.98:0,59,423	0/0:20,0:20:50.44:0,50,362	0/0:24,0:24:59.73:0,60,461
chr10	75719322	.	TG	T	2062.28	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.597;DP=553;FS=8.153;HRun=1;HaplotypeScore=71.1148;InbreedingCoeff=0.9467;MQ=71.60;MQ0=4;MQRankSum=-6.478;QD=30.78;ReadPosRankSum=-0.599;VQSLOD=2.3989;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:82.13:0,82,1193	0/0:7,0:7:20.71:0,21,231	0/0:48,0:17:35.13:0,35,317	0/0:43,0:16:0.67:0,1,137	0/0:23,0:23:33:0,33,698	0/0:13,1:14:31.71:0,32,540	0/0:15,0:15:45.07:0,45,592	0/0:33,0:33:95.21:0,95,1204	1/1:0,13:12:36.08:465,36,0	0/0:24,0:24:72.12:0,72,963	0/0:20,0:20:60.16:0,60,786	1/1:3,7:10:24.07:312,24,0	1/1:1,10:11:33.07:418,33,0	0/0:19,0:19:57.01:0,57,705	0/0:15,0:15:43.63:0,44,562	0/0:15,0:15:45.13:0,45,610	0/0:21,0:21:60.17:0,60,815	0/0:16,0:16:47.35:0,47,606	0/0:23,0:23:69.08:0,69,851	0/0:10,0:10:29.62:0,30,345	0/0:6,0:6:17.85:0,18,226	1/1:3,9:12:36.04:442,36,0	1/1:0,9:9:23.67:300,24,0	1/1:0,12:12:24.04:310,24,0	0/0:24,0:24:63.30:0,63,931	0/0:28,0:28:80.42:0,80,1057	0/0:25,0:25:18.09:0,18,802	0/0:26,0:26:46.79:0,47,936
chr10	75719329	.	GT	G	628.54	PASS	AB=0.833;AC=13;AF=0.232;AN=56;BaseQRankSum=8.771;DP=542;FS=6.792;HRun=13;HaplotypeScore=73.0307;InbreedingCoeff=0.6362;MQ=69.32;MQ0=4;MQRankSum=-2.274;QD=5.82;ReadPosRankSum=-0.470;VQSLOD=2.0860;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:91.44:0,91,802	0/0:6,0:6:6.37:0,6,125	0/0:46,0:14:5.70:0,6,41	0/0:40,0:14:8.57:0,9,56	0/0:24,0:24:46.51:0,47,473	0/1:14,0:15:7.20:7,0,205	0/0:14,0:14:33.81:0,34,342	0/0:31,1:33:50:0,50,615	1/1:7,6:12:26.58:178,27,0	0/0:22,0:22:51.07:0,51,489	0/0:14,2:17:13.85:0,14,268	1/1:3,6:9:14.84:104,15,0	1/1:6,5:12:21.93:142,22,0	0/0:15,0:15:10.16:0,10,203	0/0:15,0:15:17.18:0,17,306	0/0:11,0:13:26.72:0,27,233	0/1:20,3:27:23.62:24,0,431	0/0:15,1:16:0.60:0,1,293	0/0:16,2:19:19.97:0,20,319	0/0:8,0:9:23.89:0,24,200	0/0:6,0:6:14.99:0,15,137	1/1:5,5:10:17.87:129,18,0	0/1:3,6:9:5.08:107,0,5	1/1:6,7:13:17.65:116,18,0	0/0:25,0:25:56.99:0,57,528	0/0:26,0:28:40.24:0,40,476	0/0:25,1:26:43.25:0,43,583	0/0:23,1:25:37.96:0,38,502
chr10	75720412	.	AAAG	A	4416.92	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.702;DP=579;FS=0.404;HRun=0;HaplotypeScore=94.2483;InbreedingCoeff=0.9968;MQ=74.43;MQ0=3;MQRankSum=-6.156;QD=35.62;ReadPosRankSum=1.369;VQSLOD=5.2243;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:63.21:1036,63,0	0/0:7,0:7:21.06:0,21,438	0/0:31,0:21:56.90:0,57,1043	0/0:24,0:13:22.75:0,23,499	0/0:36,0:35:99:0,102,2212	0/0:18,0:17:32.09:0,32,702	0/0:24,0:23:58.17:0,58,1275	0/0:35,0:35:76.35:0,76,1798	1/1:1,16:16:27.09:438,27,0	0/0:23,0:23:69.24:0,69,1494	0/0:17,0:17:51.17:0,51,1106	1/1:6,10:16:32.77:422,33,0	1/1:3,11:14:20.93:341,21,0	0/0:12,0:12:36.10:0,36,722	0/0:35,0:35:99:0,99,2068	0/0:16,0:16:48.14:0,48,948	0/0:31,0:31:93.19:0,93,1811	0/0:10,0:10:29.93:0,30,611	0/0:14,0:14:39.12:0,39,810	0/0:22,0:22:59.57:0,60,1294	0/0:21,0:21:43.29:0,43,1220	1/1:4,17:21:60.12:916,60,0	1/1:1,23:24:60.06:980,60,0	1/1:1,7:8:20.95:283,21,0	0/0:16,0:16:48.16:0,48,1092	0/0:24,0:24:63:0,63,1340	0/0:24,0:24:50.33:0,50,1417	0/0:15,0:15:45.10:0,45,798
chr10	75720414	.	AGAG	A	2570.48	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.223;DP=575;FS=1.329;HRun=0;HaplotypeScore=99.0623;InbreedingCoeff=0.9785;MQ=71.36;MQ0=3;MQRankSum=-8.481;QD=21.24;ReadPosRankSum=3.235;VQSLOD=3.5336;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:62.98:557,63,0	0/0:7,0:7:21.07:0,21,444	0/0:30,0:19:56.78:0,57,1008	0/0:26,0:12:6.14:0,6,459	0/0:34,0:33:99:0,99,2133	0/0:17,0:16:46.31:0,46,758	0/0:24,0:23:67.76:0,68,1284	0/0:34,1:35:60.24:0,60,1719	1/1:16,1:16:27:251,27,0	0/0:25,0:25:75.25:0,75,1558	0/0:18,0:18:54.16:0,54,1099	1/1:11,3:14:33.03:334,33,0	1/1:11,2:13:20.73:236,21,0	0/0:12,0:12:36.12:0,36,731	0/0:33,0:33:96.31:0,96,1991	0/0:17,0:17:51.09:0,51,980	0/0:31,0:31:90.30:0,90,1850	0/0:10,0:10:29.13:0,29,576	0/0:15,0:15:45.15:0,45,925	0/0:21,0:21:60.07:0,60,1263	0/0:22,0:22:24.71:0,25,1197	1/1:17,4:21:59.89:596,60,0	1/1:23,1:24:60.06:613,60,0	1/1:7,0:8:20.61:182,21,0	0/0:16,0:16:48.16:0,48,1060	0/0:21,0:21:56.67:0,57,1262	0/0:24,0:24:70.10:0,70,1387	0/0:16,0:16:48.12:0,48,869
chr10	75720830	.	GA	G	2704.01	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.183;DP=599;FS=3.854;HRun=5;HaplotypeScore=64.0079;InbreedingCoeff=0.9878;MQ=70.43;MQ0=0;MQRankSum=-0.325;QD=28.17;ReadPosRankSum=0.187;VQSLOD=3.8597;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.26:0,90,1193	0/0:12,0:12:36.12:0,36,493	0/0:14,0:14:32.71:0,33,423	0/0:4,0:4:9.03:0,9,121	0/0:29,0:29:84.27:0,84,1132	0/0:27,0:27:75.21:0,75,987	0/0:14,0:14:36.11:0,36,476	0/0:37,0:37:96.30:0,96,1281	1/1:2,11:13:30.08:340,30,0	0/0:33,0:33:96.25:0,96,1260	0/0:29,0:29:75.24:0,75,1010	1/1:0,20:20:60.17:681,60,0	1/1:0,23:23:63.18:714,63,0	0/0:14,0:14:42.13:0,42,551	0/0:17,0:17:51.17:0,51,698	0/0:29,0:29:87.28:0,87,1174	0/0:25,0:25:72.24:0,72,981	0/0:22,0:22:66.20:0,66,886	0/0:18,0:18:51.16:0,51,684	0/0:28,0:28:81.27:0,81,1108	0/0:15,0:15:45.15:0,45,615	1/1:0,9:9:27.08:306,27,0	1/1:1,17:18:41.90:476,42,0	1/1:1,12:13:33.09:374,33,0	0/0:25,0:25:75.25:0,75,1023	0/0:27,0:27:81.27:0,81,1108	0/0:27,0:27:81.27:0,81,1103	0/0:26,0:26:78.26:0,78,1064
chr10	75721442	.	TGA	T	3831.07	PASS	AB=0.914;AC=19;AF=0.339;AN=56;BaseQRankSum=12.527;DP=866;FS=0.367;HRun=0;HaplotypeScore=111.4157;InbreedingCoeff=0.5881;MQ=79.99;MQ0=19;MQRankSum=1.000;QD=12.32;ReadPosRankSum=3.391;VQSLOD=3.5765;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,32:38:62.98:713,63,0	0/0:11,0:11:24.07:0,24,352	0/0:92,1:38:0.21:0,0,273	0/0:113,0:58:29.89:0,30,455	0/0:26,1:27:12.42:0,12,658	0/0:36,0:36:49.46:0,49,1054	0/0:23,0:23:51.16:0,51,783	0/1:31,2:33:9.25:9,0,571	1/1:4,22:26:54.17:643,54,0	0/0:27,2:29:27.43:0,27,831	0/1:14,2:16:41.39:41,0,324	1/1:4,22:26:45.14:536,45,0	1/1:4,17:22:44.93:498,45,0	0/0:18,0:20:30.84:0,31,616	0/0:33,1:34:51.54:0,52,1269	0/0:21,0:22:23.58:0,24,665	0/1:20,2:22:17.29:17,0,680	0/0:21,0:22:50.98:0,51,752	0/0:26,0:26:43.37:0,43,607	0/0:26,2:28:16.41:0,16,923	0/1:31,3:33:27.43:27,0,952	1/1:4,15:19:33.06:377,33,0	1/1:5,17:22:39.12:465,39,0	1/1:1,21:23:42.13:500,42,0	0/0:33,1:34:48.55:0,49,1242	0/0:31,0:31:60.20:0,60,922	0/1:24,3:28:3.39:3,0,855	0/0:4,0:4:12.02:0,12,154
chr10	75722010	.	T	TTAC	5734.29	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-8.823;DP=662;FS=1.921;HRun=0;HaplotypeScore=91.6685;InbreedingCoeff=0.9958;MQ=61.98;MQ0=8;MQRankSum=-2.454;QD=41.25;ReadPosRankSum=1.909;VQSLOD=6.2568;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,108,1589	0/0:12,0:12:36.12:0,36,574	0/0:20,0:11:24.08:0,24,384	0/0:29,0:21:51.17:0,51,812	0/0:26,0:25:66.19:0,66,1008	0/0:14,0:13:39.13:0,39,621	0/0:35,0:35:93.32:0,93,1487	0/0:29,0:29:78.24:0,78,1181	1/1:4,14:19:39.13:833,39,0	0/0:13,0:13:33.11:0,33,526	0/0:20,0:19:51.16:0,51,793	1/1:3,19:24:45.15:972,45,0	1/1:4,22:29:63.21:1374,63,0	0/0:22,0:22:63.21:0,63,982	0/0:19,0:19:45.13:0,45,671	0/0:19,0:19:54.16:0,54,819	0/0:39,0:39:99:0,102,1604	0/0:19,0:19:57.17:0,57,886	0/0:21,0:21:48.16:0,48,772	0/0:19,0:19:57.17:0,57,868	0/0:51,0:51:99:0,144,2282	1/1:5,17:21:48.16:1006,48,0	1/1:3,11:14:24.08:507,24,0	1/1:5,25:30:47.73:1043,48,0	0/0:22,0:22:51.15:0,51,786	0/0:24,0:24:54.18:0,54,836	0/0:23,0:23:60.20:0,60,952	0/0:6,0:6:15.05:0,15,222
chr10	75722126	.	TAA	T	2736.15	PASS	AB=0.957;AC=16;AF=0.286;AN=56;BaseQRankSum=5.875;DP=598;FS=2.955;HRun=14;HaplotypeScore=82.3336;InbreedingCoeff=0.8476;MQ=70.61;MQ0=2;MQRankSum=-0.768;QD=13.68;ReadPosRankSum=6.523;VQSLOD=2.8082;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,24:32:44.80:519,45,0	0/0:12,0:12:21.05:0,21,274	0/1:19,1:14:15.73:16,0,117	0/1:20,0:14:1.95:2,0,132	0/0:22,0:26:46.49:0,46,462	0/0:13,0:15:35.08:0,35,421	0/0:22,0:24:53.60:0,54,653	0/0:19,0:22:43.60:0,44,514	1/1:1,19:21:56.79:512,57,0	0/0:18,0:21:42.11:0,42,533	0/0:14,1:20:24.57:0,25,499	1/1:5,21:27:59.63:539,60,0	1/1:5,8:14:23.74:206,24,0	0/0:14,0:17:29.04:0,29,319	0/0:9,0:30:51.11:0,51,560	0/0:27,0:29:74.62:0,75,912	0/0:10,0:24:45.08:0,45,475	0/0:20,0:21:59.62:0,60,728	0/0:19,0:22:46.61:0,47,551	0/0:16,0:19:56.15:0,56,706	0/0:19,0:19:48.09:0,48,596	1/1:5,19:25:50.67:447,51,0	1/1:4,8:12:20.98:194,21,0	1/1:5,23:28:54.02:500,54,0	0/0:17,0:19:50.64:0,51,650	0/0:22,0:22:33.53:0,34,507	0/0:26,0:28:74.17:0,74,925	0/0:7,0:7:9.02:0,9,108
chr10	75722366	.	GA	G	3017.22	PASS	AB=0.920;AC=13;AF=0.232;AN=56;BaseQRankSum=14.549;DP=698;FS=0.354;HRun=10;HaplotypeScore=79.2934;InbreedingCoeff=0.9406;MQ=74.47;MQ0=0;MQRankSum=-2.139;QD=17.14;ReadPosRankSum=2.102;VQSLOD=4.2635;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,2:39:60.41:0,60,1101	0/0:11,0:11:18.05:0,18,199	0/1:21,2:23:0.88:1,0,376	0/0:12,0:12:26.63:0,27,304	0/0:25,0:25:69.18:0,69,755	0/0:20,1:21:34.11:0,34,604	0/0:38,0:38:96.24:0,96,1053	0/0:28,2:30:24.90:0,25,676	1/1:5,18:23:50.98:443,51,0	0/0:19,0:19:48.13:0,48,531	0/0:12,0:12:33.08:0,33,357	1/1:8,26:34:65.98:573,66,0	1/1:1,27:28:74.97:651,75,0	0/0:24,0:24:66.18:0,66,730	0/0:39,0:38:87.23:0,87,955	0/0:36,0:37:99:0,99,1059	0/0:24,0:27:69:0,69,735	0/0:23,0:23:54.13:0,54,587	0/0:28,2:30:26.10:0,26,744	0/0:19,0:19:45.11:0,45,490	0/0:28,1:29:49.13:0,49,756	1/1:2,14:16:35.98:313,36,0	1/1:1,14:15:38.99:339,39,0	1/1:2,35:37:99:885,102,0	0/0:21,0:21:45.12:0,45,498	0/0:29,0:30:72.03:0,72,777	0/0:28,0:28:75.19:0,75,821	0/0:8,0:8:24.06:0,24,265
chr10	75726059	.	CT	C	990.58	PASS	AB=0.964;AC=15;AF=0.268;AN=56;BaseQRankSum=14.300;DP=595;FS=0.000;HRun=10;HaplotypeScore=75.3954;InbreedingCoeff=0.6103;MQ=73.32;MQ0=6;MQRankSum=1.272;QD=4.81;ReadPosRankSum=1.409;VQSLOD=0.8687;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:26.16:266,26,0	0/0:8,0:8:18.05:0,18,199	0/1:24,1:20:8.02:8,0,170	0/1:20,1:15:32.02:32,0,79	0/0:40,0:40:95.83:0,96,1030	0/0:26,0:25:57.11:0,57,612	0/0:8,0:8:18.05:0,18,199	0/0:31,0:30:72.16:0,72,777	1/1:16,0:16:12.27:134,12,0	0/0:19,0:18:45.12:0,45,498	0/0:12,0:12:21.06:0,21,232	1/1:24,0:24:2.98:131,3,0	1/1:28,0:27:30.48:223,30,0	0/0:12,0:12:30.08:0,30,332	0/0:29,0:29:75.17:0,75,811	0/0:26,0:26:72.18:0,72,789	0/0:34,0:33:72.19:0,72,795	0/0:28,1:30:30.15:0,30,588	0/1:17,2:19:0.98:1,0,447	0/0:18,0:18:42.11:0,42,464	0/0:18,0:18:45.07:0,45,469	0/1:9,0:9:7.38:86,0,7	1/1:18,0:18:41.57:216,42,0	0/1:12,0:12:0.37:69,0,0	0/0:15,0:14:27.07:0,27,298	0/0:31,0:31:75.19:0,75,823	0/0:23,0:23:57.14:0,57,621	0/0:9,0:9:27.07:0,27,299
chr10	75726069	.	TA	T	3778.20	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=11.255;DP=547;FS=1.825;HRun=2;HaplotypeScore=57.2783;InbreedingCoeff=0.8974;MQ=66.10;MQ0=7;MQRankSum=0.110;QD=25.88;ReadPosRankSum=2.292;VQSLOD=3.4315;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:72.23:929,72,0	0/0:7,0:7:18.06:0,18,245	0/0:19,0:13:6.86:0,7,241	0/1:17,0:11:10.69:11,0,123	0/0:38,0:38:99:0,108,1386	0/0:20,0:19:54.17:0,54,735	0/0:9,0:9:27.06:0,27,325	0/0:34,0:32:89.99:0,90,1066	1/1:0,17:17:36.12:465,36,0	0/0:18,0:15:48.14:0,48,624	0/0:11,0:11:29.95:0,30,353	1/1:1,20:22:41.35:512,41,0	1/1:2,24:25:57.10:712,57,0	0/0:12,0:12:33.09:0,33,433	0/0:26,0:26:78.22:0,78,1015	0/0:25,0:25:75.22:0,75,991	0/0:31,0:30:90.14:0,90,1103	0/0:30,0:30:71.80:0,72,889	0/0:19,0:19:53.28:0,53,656	0/0:14,0:14:42.14:0,42,572	0/0:16,0:16:39.13:0,39,526	1/1:1,8:9:19.29:304,19,0	1/1:1,16:17:45.06:558,45,0	1/1:2,7:9:23.99:288,24,0	0/0:11,0:10:27.07:0,27,350	0/0:29,0:29:84.25:0,84,1093	0/0:23,0:23:66.17:0,66,837	0/0:9,0:9:27.09:0,27,368
chr10	75726511	.	TA	T	528.92	PASS	AB=0.944;AC=14;AF=0.250;AN=56;BaseQRankSum=5.128;DP=428;FS=9.604;HRun=13;HaplotypeScore=46.9717;InbreedingCoeff=0.6772;MQ=53.91;MQ0=11;MQRankSum=0.805;QD=5.45;ReadPosRankSum=1.333;VQSLOD=0.9128;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:28:20.29:0,20,416	0/0:1,0:1:3:0,3,29	0/0:6,0:2:6.01:0,6,58	0/0:4,0:2:5.89:0,6,36	0/0:19,0:19:33.04:0,33,312	0/0:20,1:21:0.42:0,0,300	0/1:11,0:10:0.29:0,0,140	0/0:27,0:23:36.68:0,37,335	1/1:6,6:11:17.66:120,18,0	0/0:16,0:16:35.39:0,35,303	0/0:14,0:14:21:0,21,196	1/1:6,10:16:15.91:144,16,0	1/1:2,11:14:25.89:181,26,0	0/0:11,0:11:24.03:0,24,229	0/0:14,1:15:11.12:0,11,262	0/0:15,0:15:6.64:0,7,210	0/0:31,3:34:17.73:0,18,571	0/0:28,2:28:29.15:0,29,435	0/1:21,3:23:1.86:2,0,285	0/0:13,0:12:29.99:0,30,277	0/0:8,0:8:11.97:0,12,107	1/1:2,2:4:10.04:56,10,0	1/1:1,4:7:15.05:83,15,0	1/1:0,8:9:16.95:115,17,0	0/0:9,0:9:4.07:0,4,127	0/0:16,1:17:1.41:0,1,303	0/0:25,0:25:56.11:0,56,503	0/0:17,0:16:24.04:0,24,234
chr10	75730731	.	GCATT	G	2952.02	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=11.444;DP=675;FS=0.480;HRun=0;HaplotypeScore=107.9440;InbreedingCoeff=0.9455;MQ=65.92;MQ0=1;MQRankSum=-0.320;QD=25.02;ReadPosRankSum=2.588;VQSLOD=3.3222;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:81.24:0,81,1841	0/0:14,0:14:39.12:0,39,877	0/0:23,0:18:14.97:0,15,201	./.	0/0:34,0:34:72.23:0,72,1604	0/0:33,0:33:72.23:0,72,1647	0/0:16,0:16:42.12:0,42,866	0/0:31,0:31:54.18:0,54,1142	1/1:6,20:26:39.13:636,39,0	0/0:28,0:28:11.26:0,11,1320	0/0:26,1:27:2.20:0,2,1067	1/1:7,11:18:21.07:343,21,0	1/1:5,11:16:33.11:539,33,0	0/0:26,0:26:66.21:0,66,1519	0/0:36,0:35:84.29:0,84,1993	0/0:31,0:31:72.23:0,72,1557	0/0:24,0:24:63.22:0,63,1464	0/0:11,0:11:21.07:0,21,506	0/0:14,0:14:18.06:0,18,438	0/0:29,0:29:51.16:0,51,1130	0/0:21,0:21:51.16:0,51,1089	1/1:3,15:18:39.09:593,39,0	1/1:7,12:19:25.94:438,26,0	1/1:7,14:21:36.12:588,36,0	0/0:31,1:32:23.26:0,23,1585	0/0:30,0:30:60.21:0,60,1459	0/0:34,0:34:75.26:0,75,1782	0/0:12,0:12:21.07:0,21,471
chr10	75733601	.	G	GT	1244.06	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.660;DP=715;FS=1.464;HRun=2;HaplotypeScore=68.2780;InbreedingCoeff=0.9839;MQ=89.38;MQ0=0;MQRankSum=-4.221;QD=35.54;ReadPosRankSum=1.898;VQSLOD=4.3131;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:34:93.31:1339,93,0	0/0:13,0:13:39.10:0,39,460	0/0:24,0:25:69.08:0,69,775	0/0:28,0:29:78.02:0,78,888	0/0:33,0:33:87.25:0,87,1062	0/0:30,0:30:81.25:0,81,1003	0/0:17,0:17:51.11:0,51,602	0/0:46,0:46:99:0,135,1630	0/0:11,0:11:30.09:0,30,372	0/0:20,0:19:54.17:0,54,667	0/0:20,0:20:51.16:0,51,629	0/0:32,0:32:90.28:0,90,1114	0/0:29,0:28:84.25:0,84,1026	0/0:23,0:23:63.20:0,63,781	0/0:40,0:40:99:0,117,1447	0/0:29,0:29:81.25:0,81,1003	0/0:21,0:21:60.19:0,60,742	0/0:22,0:22:66.14:0,66,781	0/0:13,0:13:39.11:0,39,472	0/0:30,0:30:84.26:0,84,1041	0/0:32,0:32:93.29:0,93,1152	0/0:32,0:32:84.25:0,84,1028	0/0:36,0:36:99:0,102,1251	0/0:24,0:24:72.23:0,72,891	0/0:24,0:24:66.21:0,66,817	0/0:24,0:24:72.21:0,72,872	0/0:20,0:20:54.14:0,54,644	0/0:5,0:5:15.05:0,15,186
chr10	75734047	.	G	GTT	3984.53	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-8.463;DP=694;FS=5.909;HRun=8;HaplotypeScore=83.7295;InbreedingCoeff=0.9995;MQ=70.05;MQ0=1;MQRankSum=-2.967;QD=32.39;ReadPosRankSum=0.928;VQSLOD=3.7196;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1110	0/0:15,0:15:45.11:0,45,492	0/0:26,0:24:46.73:0,47,492	0/0:19,0:17:42.07:0,42,449	0/0:23,0:23:60.15:0,60,666	0/0:29,0:29:81.20:0,81,893	0/0:38,0:37:96.22:0,96,1070	0/0:40,0:40:99:0,99,1089	1/1:4,13:17:30.10:475,30,0	0/0:23,0:23:63.16:0,63,702	0/0:24,0:24:63.14:0,63,692	1/1:4,24:28:59.01:910,59,0	1/1:5,12:19:35.57:475,36,0	0/0:20,0:20:54.14:0,54,602	0/0:28,0:28:75.18:0,75,825	0/0:39,0:39:99:0,114,1261	0/0:23,0:23:69.19:0,69,765	0/0:9,0:9:25.31:0,25,270	0/0:25,0:26:63.09:0,63,745	0/0:38,0:38:99:0,108,1204	0/0:23,0:23:57.13:0,57,635	1/1:2,22:25:66.04:1018,66,0	1/1:1,15:17:36.12:553,36,0	1/1:3,12:17:38.61:555,39,0	0/0:25,0:25:72.18:0,72,793	0/0:26,0:26:66.16:0,66,728	0/0:26,0:26:63.10:0,63,684	0/0:16,0:16:39.09:0,39,432
chr10	75735222	.	TTG	T	463.73	PASS	AB=0.957;AC=18;AF=0.321;AN=56;BaseQRankSum=5.721;DP=470;FS=1.795;HRun=0;HaplotypeScore=80.4161;InbreedingCoeff=0.6097;MQ=63.02;MQ0=8;MQRankSum=-6.484;QD=3.38;ReadPosRankSum=0.659;VQSLOD=1.8406;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:16:0.32:77,0,0	0/0:8,0:8:20.34:0,20,172	0/0:27,0:9:19.94:0,20,181	0/0:22,0:9:13.93:0,14,154	0/0:22,0:21:54.06:0,54,499	0/0:15,0:15:30.41:0,30,211	0/0:13,0:13:19.35:0,19,301	0/0:33,1:32:2.60:0,3,441	1/1:15,0:15:11.33:68,11,0	0/0:23,0:23:39.16:0,39,393	0/0:16,1:17:16.35:0,16,351	1/1:6,0:6:14.70:90,15,0	1/1:12,0:11:14.87:116,15,0	0/1:12,1:12:9.27:9,0,137	0/0:21,0:21:48.85:0,49,447	0/0:24,0:23:45.05:0,45,392	0/0:19,0:19:47.93:0,48,431	0/0:14,0:13:32.05:0,32,248	0/0:17,0:17:47.53:0,48,440	0/0:15,1:15:38.59:0,39,337	0/1:14,0:14:14.15:14,0,195	1/1:13,0:12:21.66:118,22,0	1/1:11,0:11:11.25:61,11,0	1/1:11,0:11:11.78:78,12,0	0/0:21,0:21:53.30:0,53,500	0/0:20,0:18:31.10:0,31,359	0/1:16,2:18:1.82:2,0,216	0/1:5,0:5:16.43:16,0,105
chr10	75735231	.	T	TTGG	1334.38	PASS	AB=0.965;AC=10;AF=0.179;AN=56;BaseQRankSum=9.656;DP=533;FS=17.225;HRun=0;HaplotypeScore=105.6063;InbreedingCoeff=0.0444;MQ=48.52;MQ0=38;MQRankSum=-6.931;QD=9.02;ReadPosRankSum=4.824;VQSLOD=1.3000;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:17:19.60:417,0,20	0/0:9,0:8:21.06:0,21,294	0/1:21,0:4:9.16:9,0,45	0/1:19,0:6:3.13:3,0,51	0/0:24,0:21:57.17:0,57,802	0/0:23,0:23:57.14:0,57,749	0/0:19,0:16:45.14:0,45,623	0/0:33,0:30:75.19:0,75,1038	0/1:12,1:15:36.22:330,0,36	0/0:25,0:25:68.06:0,68,978	0/0:20,0:19:51.16:0,51,707	0/1:9,0:9:74.02:150,0,74	1/1:10,5:13:17.34:215,17,0	0/0:14,0:13:33.11:0,33,455	0/0:20,0:19:51.17:0,51,772	0/0:26,0:25:75.24:0,75,1055	0/0:21,0:18:46.62:0,47,592	0/0:18,0:12:30.10:0,30,416	0/0:17,0:15:42.12:0,42,577	0/0:18,0:17:45.13:0,45,609	0/0:12,0:12:27.07:0,27,351	0/1:16,0:13:43.83:133,0,44	0/1:11,0:11:27.58:88,0,28	0/1:13,0:11:37.96:135,0,38	0/0:28,0:27:72.19:0,72,988	0/0:28,0:26:75.20:0,75,1008	0/0:14,0:13:33.11:0,33,465	0/0:16,0:12:24.06:0,24,338
chr10	75735232	.	T	TGG	1047.97	PASS	AB=0.797;AC=9;AF=0.161;AN=56;BaseQRankSum=9.901;DP=532;FS=30.386;HRun=0;HaplotypeScore=89.4123;InbreedingCoeff=-0.1702;MQ=46.23;MQ0=39;MQRankSum=-6.741;QD=7.38;ReadPosRankSum=5.393;VQSLOD=1.5491;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,4:16:46.42:323,0,46	0/0:9,0:8:21.06:0,21,290	0/1:21,0:3:0.19:0,0,41	0/1:18,0:5:3.31:3,0,47	0/0:24,0:21:56.21:0,56,776	0/0:22,0:22:57.14:0,57,740	0/0:19,0:16:45.15:0,45,627	0/0:34,0:30:75.19:0,75,1012	0/1:8,5:14:39.88:310,0,40	0/0:25,0:25:72.21:0,72,1008	0/0:20,0:19:51.17:0,51,723	0/1:7,1:9:99:131,0,112	0/1:9,2:8:24.98:60,0,25	0/0:14,0:13:33.10:0,33,437	0/0:21,0:20:51.17:0,51,767	0/0:26,0:25:75.23:0,75,1016	0/0:21,0:18:48.11:0,48,637	0/0:18,0:12:30.06:0,30,385	0/0:17,0:15:41.80:0,42,567	0/0:18,0:17:45.13:0,45,613	0/0:12,0:12:27.07:0,27,355	0/1:13,5:15:41.71:138,0,42	0/1:3,1:10:28.46:62,0,28	0/1:10,5:13:31.06:151,0,31	0/0:28,0:27:72.22:0,72,1016	0/0:30,0:27:75.20:0,75,1019	0/0:14,0:13:33.11:0,33,444	0/0:18,0:14:33:0,33,402
chr10	75735333	.	AGTT	A	78.21	PASS	AB=0.857;AC=14;AF=0.269;AN=52;BaseQRankSum=7.760;DP=373;FS=8.434;HRun=0;HaplotypeScore=55.9229;InbreedingCoeff=0.6058;MQ=50.51;MQ0=42;MQRankSum=-6.149;QD=1.74;ReadPosRankSum=6.141;VQSLOD=-0.0441;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,3:4:11.62:66,12,0	0/0:3,0:3:9:0,9,167	0/0:28,0:5:9.47:0,9,121	./.	0/0:11,1:12:7.35:0,7,384	0/0:10,0:11:27.09:0,27,569	0/0:18,2:18:16.62:0,17,886	0/0:21,0:21:57.01:0,57,1054	./.	0/0:19,1:19:35.37:0,35,848	0/0:10,0:10:24.08:0,24,529	1/1:1,4:5:11.69:69,12,0	1/1:0,1:1:2.90:16,3,0	0/0:11,0:11:27.03:0,27,506	0/0:8,0:8:18.06:0,18,434	0/0:13,0:13:39.04:0,39,706	0/0:39,0:39:92.23:0,92,2276	0/0:25,2:24:13.16:0,13,854	0/0:9,1:10:9.85:0,10,350	0/1:17,4:20:24.48:24,0,613	0/0:14,2:15:22.39:0,22,656	1/1:2,1:2:2.94:18,3,0	1/1:0,1:1:2.94:18,3,0	1/1:1,1:1:2.84:14,3,0	0/0:19,0:18:53.95:0,54,789	0/0:17,0:16:44.80:0,45,846	0/0:7,0:7:21.05:0,21,456	0/1:6,1:6:5.19:5,0,242
chr10	75736689	.	C	CG	572.22	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.993;DP=525;FS=21.782;HRun=6;HaplotypeScore=55.0235;InbreedingCoeff=0.9052;MQ=80.74;MQ0=0;MQRankSum=-2.040;QD=23.84;ReadPosRankSum=1.282;VQSLOD=1.9633;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:24:54.13:667,54,0	0/0:11,0:11:27.03:0,27,265	0/0:16,0:16:6.23:0,6,241	0/0:14,0:14:30.02:0,30,289	0/0:24,0:24:63.06:0,63,606	0/0:20,0:20:51.08:0,51,510	0/0:22,0:22:48.07:0,48,476	0/0:19,0:19:57.08:0,57,555	0/0:15,0:15:36.02:0,36,355	0/0:19,0:19:57.09:0,57,569	0/0:21,0:21:60.12:0,60,605	0/0:12,0:12:33.07:0,33,337	0/0:11,0:11:33.08:0,33,336	0/0:19,0:19:54.10:0,54,540	0/0:17,0:17:45.10:0,45,459	0/0:30,0:30:72.15:0,72,734	0/0:37,0:37:97.81:0,98,995	0/0:18,0:18:45.07:0,45,444	0/0:18,0:19:47.38:0,47,427	0/0:11,0:11:27.06:0,27,275	0/0:18,0:18:45.08:0,45,449	0/0:14,0:14:39.09:0,39,397	0/0:24,0:24:66.09:0,66,652	0/0:21,0:21:59.98:0,60,582	0/0:12,0:12:29.16:0,29,304	0/0:20,0:20:51.11:0,51,520	0/0:26,0:26:75.14:0,75,749	0/0:11,0:11:33.08:0,33,337
chr10	75736926	.	TA	T	2735.93	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.299;DP=628;FS=1.813;HRun=8;HaplotypeScore=66.4247;InbreedingCoeff=0.9872;MQ=77.84;MQ0=0;MQRankSum=0.407;QD=23.59;ReadPosRankSum=1.417;VQSLOD=4.5232;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:60.38:0,60,324	0/0:11,0:11:30.08:0,30,353	0/0:22,0:22:38.08:0,38,534	0/0:8,0:8:9.02:0,9,103	0/0:25,0:25:72.14:0,72,837	0/0:19,0:19:51.12:0,51,590	0/0:24,0:24:72.21:0,72,859	0/0:39,0:39:99:0,99,1174	1/1:0,18:18:51.08:493,51,0	0/0:30,0:30:81.25:0,81,979	0/0:25,0:25:60.18:0,60,723	1/1:1,17:18:51.08:493,51,0	1/1:1,20:21:57.09:550,57,0	0/0:15,0:15:36.11:0,36,435	0/0:24,0:24:66.20:0,66,797	0/0:24,0:24:69.21:0,69,833	0/0:25,0:25:69.21:0,69,833	0/0:22,0:22:51.10:0,51,587	0/0:23,0:23:57.17:0,57,679	0/0:32,0:32:90.27:0,90,1083	0/0:27,0:27:72.22:0,72,870	1/1:2,21:23:54.08:521,54,0	1/1:1,26:27:67.68:664,68,0	1/1:0,9:9:21.03:203,21,0	0/0:22,0:22:54.15:0,54,640	0/0:28,0:28:69.21:0,69,834	0/0:29,0:29:84.25:0,84,1004	0/0:13,0:13:33.10:0,33,399
chr10	75736934	.	A	AC	795.91	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.954;DP=605;FS=2.987;HRun=1;HaplotypeScore=71.2678;InbreedingCoeff=0.9667;MQ=75.13;MQ0=0;MQRankSum=0.015;QD=31.84;ReadPosRankSum=0.217;VQSLOD=3.3013;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:63.21:891,63,0	0/0:10,0:10:27.07:0,27,335	0/0:20,0:20:54.04:0,54,616	0/0:5,0:5:12.02:0,12,140	0/0:26,0:26:75.14:0,75,916	0/0:18,0:18:48.13:0,48,593	0/0:24,0:24:72.22:0,72,915	0/0:36,0:36:99:0,102,1263	0/0:20,0:20:54.65:0,55,311	0/0:30,0:30:87.27:0,87,1104	0/0:22,0:22:60.19:0,60,763	0/0:19,0:19:52.29:0,52,288	0/0:22,0:22:58.12:0,58,322	0/0:13,0:13:39.11:0,39,490	0/0:22,0:22:66.20:0,66,840	0/0:28,0:28:78.19:0,78,952	0/0:25,0:25:75.11:0,75,911	0/0:18,0:18:51.13:0,51,628	0/0:21,0:21:57.16:0,57,703	0/0:30,0:30:90.29:0,90,1163	0/0:28,0:28:81.20:0,81,995	0/0:22,0:22:58.17:0,58,330	0/0:27,0:27:69.58:0,70,391	0/0:10,0:10:23.28:0,23,131	0/0:19,0:19:51.11:0,51,616	0/0:25,0:25:75.23:0,75,944	0/0:28,0:28:81.20:0,81,1001	0/0:12,0:12:33.08:0,33,409
chr10	75737361	.	TTCTG	T	873.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.543;DP=668;FS=0.885;HRun=0;HaplotypeScore=111.2886;InbreedingCoeff=0.9984;MQ=89.77;MQ0=0;MQRankSum=-0.964;QD=39.68;ReadPosRankSum=1.202;VQSLOD=3.8321;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:51.17:968,51,0	0/0:9,0:9:27.09:0,27,729	0/0:25,0:25:57.04:0,57,1334	0/0:29,0:29:42.61:0,43,1598	0/0:27,0:27:81.28:0,81,2139	0/0:20,0:20:60.21:0,60,1619	0/0:18,0:18:51.16:0,51,1295	0/0:27,0:27:69.23:0,69,1805	0/0:26,0:26:78.24:0,78,1957	0/0:26,0:26:72.24:0,72,1888	0/0:19,0:19:54.19:0,54,1400	0/0:24,0:24:69.24:0,69,1831	0/0:32,0:32:90.31:0,90,2381	0/0:25,0:25:75.26:0,75,1990	0/0:38,0:38:99:0,114,3077	0/0:35,0:35:90.30:0,90,2331	0/0:20,0:19:57.15:0,57,1422	0/0:16,0:16:48.16:0,48,1283	0/0:22,0:22:57.15:0,57,1359	0/0:24,0:24:72.21:0,72,1803	0/0:24,0:24:69.16:0,69,1733	0/0:21,0:21:57.20:0,57,1505	0/0:25,0:25:69.24:0,69,1825	0/0:19,0:19:51.16:0,51,1319	0/0:16,0:16:45.15:0,45,1202	0/0:35,0:35:96.31:0,96,2468	0/0:34,0:34:90.29:0,90,2344	0/0:10,0:10:30.10:0,30,809
chr10	75737804	.	GATTT	G	361.08	PASS	AB=1.000;AC=12;AF=0.250;AN=48;BaseQRankSum=5.198;DP=275;FS=1.145;HRun=0;HaplotypeScore=46.8084;InbreedingCoeff=0.5413;MQ=64.43;MQ0=0;MQRankSum=-0.258;QD=7.68;ReadPosRankSum=-0.287;VQSLOD=1.8773;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:11:9.47:65,9,0	0/0:6,0:6:6.02:0,6,143	0/1:6,0:4:0:0,0,0	./.	0/0:11,0:11:6.02:0,6,143	0/0:14,0:14:18.06:0,18,428	./.	0/0:43,0:42:42.13:0,42,851	1/1:1,4:5:12.04:189,12,0	0/0:6,0:6:6.01:0,6,99	0/0:7,0:7:3.01:0,3,71	0/0:6,0:6:6.02:0,6,110	1/1:4,3:7:9.03:142,9,0	0/0:6,0:6:6.02:0,6,138	0/0:10,0:10:3.01:0,3,71	0/0:15,0:15:18.06:0,18,396	0/0:28,0:28:66.23:0,66,1546	0/1:9,0:9:8.79:9,0,325	0/0:14,0:13:9.03:0,9,214	./.	0/0:5,0:5:6.02:0,6,143	./.	1/1:4,1:5:3.01:47,3,0	1/1:3,1:4:3.01:47,3,0	0/0:12,0:12:9.03:0,9,186	0/0:9,0:9:12.04:0,12,286	0/0:14,0:14:18.06:0,18,428	0/0:4,0:9:15.05:0,15,252
chr10	75740146	.	AAAAC	A	5022.68	PASS	AB=0.640;AC=11;AF=0.196;AN=56;BaseQRankSum=12.318;DP=789;FS=3.502;HRun=0;HaplotypeScore=107.2411;InbreedingCoeff=0.6498;MQ=49.53;MQ0=30;MQRankSum=3.281;QD=21.28;ReadPosRankSum=4.347;VQSLOD=4.7129;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:23,18:35:15.05:540,0,15	0/0:13,0:12:24.08:0,24,555	0/0:11,0:4:9.03:0,9,199	0/0:16,0:8:17.06:0,17,223	0/0:34,0:32:57.19:0,57,1226	0/0:30,0:30:72.25:0,72,1689	0/0:19,0:19:45.15:0,45,1060	0/0:34,0:30:61.44:0,61,1187	1/1:8,18:24:36.12:583,36,0	0/0:40,0:37:93.30:0,93,2074	0/0:23,0:19:36.12:0,36,820	1/1:6,33:37:81.03:1312,81,0	0/1:16,25:40:99:809,0,103	0/0:28,0:25:54.19:0,54,1286	0/0:39,0:37:81.28:0,81,1896	0/0:42,0:42:93.32:0,93,2146	0/0:27,0:26:39.13:0,39,935	0/0:18,0:17:24.08:0,24,509	0/0:21,0:18:39.04:0,39,771	0/0:34,0:33:54.19:0,54,1264	0/0:23,0:22:32.13:0,32,806	1/1:13,8:19:18.06:292,18,0	1/1:6,15:21:36.12:583,36,0	0/1:16,31:41:76.49:903,0,76	0/0:27,0:27:54.19:0,54,1245	0/0:32,0:30:64.04:0,64,1498	0/0:29,0:28:66.23:0,66,1549	0/0:13,0:13:24.08:0,24,578
chr10	75741008	.	A	AATCT	986.25	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.978;DP=679;FS=1.033;HRun=0;HaplotypeScore=106.7350;InbreedingCoeff=0.9975;MQ=83.10;MQ0=0;MQRankSum=-2.427;QD=44.83;ReadPosRankSum=0.040;VQSLOD=3.9969;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,15:22:42.14:1081,42,0	0/0:8,0:8:24.08:0,24,442	0/0:19,0:19:48.16:0,48,840	0/0:24,0:24:63.22:0,63,1123	0/0:43,0:43:99:0,120,2172	0/0:28,0:28:75.24:0,75,1347	0/0:23,0:23:54.16:0,54,961	0/0:32,0:32:84.28:0,84,1506	0/0:13,0:13:39.13:0,39,711	0/0:26,0:26:75.26:0,75,1375	0/0:28,0:28:81.28:0,81,1491	0/0:19,0:19:57.18:0,57,1012	0/0:24,0:24:69.24:0,69,1246	0/0:21,0:21:63.22:0,63,1159	0/0:25,0:25:72.25:0,72,1323	0/0:36,0:36:99:0,105,1805	0/0:24,0:24:66.20:0,66,1140	0/0:13,0:13:39.13:0,39,718	0/0:26,0:26:66.18:0,66,1150	0/0:27,0:27:78.25:0,78,1398	0/0:31,0:31:84.27:0,84,1513	0/0:28,0:28:69.22:0,69,1232	0/0:16,0:16:45.15:0,45,828	0/0:27,0:27:75.26:0,75,1372	0/0:18,0:18:54.18:0,54,967	0/0:37,0:37:99:0,111,1982	0/0:29,0:27:84.27:0,84,1512	0/0:12,0:12:33.10:0,33,576
chr10	75742149	.	CAAA	C	690.68	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.638;DP=565;FS=3.048;HRun=11;HaplotypeScore=81.4257;InbreedingCoeff=0.9538;MQ=58.35;MQ0=18;MQRankSum=-0.471;QD=18.67;ReadPosRankSum=1.858;VQSLOD=2.1423;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,31:34:60.19:786,60,0	0/0:6,0:6:18.06:0,18,363	0/0:30,0:8:11.98:0,12,121	0/0:30,0:11:19.80:0,20,216	0/0:18,0:19:48.16:0,48,914	0/0:26,0:26:72.22:0,72,1328	0/0:11,0:11:30.09:0,30,531	0/0:27,0:28:78.21:0,78,1341	0/0:17,0:17:43.96:0,44,578	0/0:24,0:23:63.17:0,63,1034	0/0:23,0:23:63.21:0,63,1200	0/0:13,0:13:33.40:0,33,392	0/0:13,0:13:39.13:0,39,532	0/0:19,0:20:42.07:0,42,751	0/0:17,0:17:35.85:0,36,645	0/0:21,0:21:51.15:0,51,973	0/0:33,0:33:81.24:0,81,1503	0/0:15,0:17:43.92:0,44,711	0/0:15,0:14:39.09:0,39,602	0/0:15,0:15:39.13:0,39,752	0/0:13,0:13:30.56:0,31,496	0/0:18,0:18:41.72:0,42,531	0/0:23,0:23:63.83:0,64,845	0/0:24,0:23:49.71:0,50,662	0/0:12,0:12:33.06:0,33,573	0/0:19,0:19:57.15:0,57,1003	0/0:20,0:21:60.17:0,60,1140	0/0:13,0:13:24.08:0,24,466
chr10	75742869	.	AAG	A	651.45	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=8.894;DP=450;FS=2.656;HRun=0;HaplotypeScore=61.5101;InbreedingCoeff=0.6744;MQ=66.46;MQ0=27;MQRankSum=-4.998;QD=3.92;ReadPosRankSum=-1.080;VQSLOD=1.7357;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:13:30.87:203,31,0	0/0:6,0:6:14.94:0,15,209	0/1:47,0:15:27.52:28,0,81	0/1:42,0:11:11.80:14,0,12	0/0:14,0:13:38.51:0,39,400	0/0:15,0:15:40.46:0,40,381	0/0:11,0:11:18.62:0,19,235	0/0:28,0:27:33.81:0,34,608	1/1:1,0:1:0.47:1,0,0	0/0:21,0:19:33.47:0,33,453	0/0:16,0:16:42:0,42,520	1/1:4,7:10:11.93:102,12,0	1/1:7,1:8:20.29:153,20,0	0/0:9,0:9:23.94:0,24,238	0/0:6,0:6:17.77:0,18,188	0/0:10,0:8:24.07:0,24,312	0/0:38,0:37:65.42:0,65,963	0/0:24,0:23:51.81:0,52,574	0/0:14,0:13:30.33:0,30,299	0/0:15,0:15:44.49:0,44,517	0/0:5,0:3:9:0,9,89	0/1:2,0:1:0:0,0,0	1/1:12,2:14:29.74:238,30,0	1/1:10,0:7:11.62:84,12,0	0/1:17,0:16:2.76:3,0,238	0/0:15,0:15:35.32:0,35,352	0/0:14,0:14:27.35:0,27,224	0/0:23,0:20:29.80:0,30,445
chr10	75742870	.	AG	A	749.51	PASS	AB=0.906;AC=16;AF=0.286;AN=56;BaseQRankSum=9.307;DP=447;FS=1.681;HRun=1;HaplotypeScore=53.6491;InbreedingCoeff=0.6172;MQ=67.19;MQ0=27;MQRankSum=-4.248;QD=4.49;ReadPosRankSum=-1.138;VQSLOD=-0.1060;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:14:31.35:148,31,0	0/0:6,0:6:14.92:0,15,159	0/1:46,1:15:36.84:37,0,55	0/1:42,1:12:9.45:9,0,55	0/0:15,0:14:33.37:0,33,310	0/0:15,0:15:21.46:0,21,259	0/0:10,0:10:3.62:0,4,154	0/0:28,0:27:4.92:0,5,485	1/1:1,0:1:2.68:11,3,0	0/0:21,0:19:14.08:0,14,359	0/0:15,0:16:41.53:0,42,386	1/1:8,3:10:12.02:128,12,0	1/1:5,3:8:22.32:161,22,0	0/0:9,0:9:23.75:0,24,185	0/0:6,0:6:13.39:0,13,131	0/0:10,0:8:23.88:0,24,231	0/0:38,0:37:38.65:0,39,691	0/0:23,0:22:33:0,33,420	0/0:13,0:12:16.52:0,17,241	0/0:15,0:15:44.34:0,44,416	0/0:5,0:3:8.99:0,9,78	0/1:1,1:1:0:0,0,0	1/1:4,10:14:32.17:279,32,0	1/1:7,3:7:17.23:146,17,0	0/1:16,0:15:9.52:10,0,201	0/0:14,0:14:29.78:0,30,266	0/0:15,0:15:14.98:0,15,154	0/0:21,0:18:23.47:0,23,331
chr10	75743675	.	ATAT	A	1201.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.937;DP=694;FS=0.734;HRun=0;HaplotypeScore=94.0861;InbreedingCoeff=0.9917;MQ=81.88;MQ0=0;MQRankSum=-5.472;QD=41.42;ReadPosRankSum=1.549;VQSLOD=4.7596;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:78.27:1296,78,0	0/0:13,0:13:39.13:0,39,882	0/0:12,0:12:33.09:0,33,671	0/0:25,0:25:75.25:0,75,1543	0/0:39,0:39:99:0,114,2515	0/0:28,0:28:84.27:0,84,1817	0/0:20,0:20:57.18:0,57,1228	0/0:36,0:36:99:0,102,2282	0/0:29,0:29:87.28:0,87,1907	0/0:26,0:26:75.26:0,75,1700	0/0:23,0:23:69.24:0,69,1537	0/0:20,0:20:60.21:0,60,1358	0/0:16,0:16:48.16:0,48,1070	0/0:20,0:20:57.17:0,57,1194	0/0:34,0:34:99:0,99,2123	0/0:36,0:36:99:0,99,2185	0/0:21,0:21:60.21:0,60,1358	0/0:14,0:14:42.13:0,42,882	0/0:21,0:21:60.21:0,60,1325	0/0:35,0:35:99:0,99,2197	0/0:41,0:41:99:0,123,2744	0/0:18,0:18:45.15:0,45,1000	0/0:23,0:23:69.24:0,69,1560	0/0:22,0:22:63.22:0,63,1407	0/0:33,0:33:99:0,99,2183	0/0:29,0:29:87.29:0,87,1916	0/0:24,0:23:72.23:0,72,1583	0/0:7,0:7:18.06:0,18,406
chr10	75744135	.	A	AGTT	4282.15	PASS	AB=0.657;AC=13;AF=0.232;AN=56;BaseQRankSum=6.701;DP=882;FS=9.819;HRun=0;HaplotypeScore=135.1411;InbreedingCoeff=0.8762;MQ=63.49;MQ0=10;MQRankSum=-4.933;QD=23.15;ReadPosRankSum=-1.332;VQSLOD=3.7149;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,64:70:57.04:1159,57,0	0/0:10,0:10:30.10:0,30,511	0/0:47,0:30:83.45:0,83,1310	0/0:36,0:32:66.37:0,66,1300	0/0:26,0:26:78.23:0,78,1251	0/0:20,0:20:57.19:0,57,968	0/0:39,0:39:99:0,114,1855	0/0:46,0:45:99:0,126,2058	1/1:5,8:13:32.37:556,32,0	0/0:46,0:46:99:0,129,2093	0/0:16,0:16:42.13:0,42,690	1/1:5,37:42:44.82:986,45,0	0/1:11,10:20:24.07:524,0,24	0/0:37,0:37:99:0,105,1763	0/0:65,0:65:99:0,187,3118	0/0:51,0:51:99:0,147,2451	0/0:23,0:23:63.22:0,63,1073	0/0:30,0:30:81.24:0,81,1348	0/0:20,0:20:60.21:0,60,1023	0/0:30,0:30:84.29:0,84,1432	0/0:72,0:71:99:0,202,3321	1/1:1,6:7:17.99:363,18,0	1/1:4,6:13:5.89:84,6,0	1/1:4,10:12:30.09:609,30,0	0/0:19,0:19:54.18:0,54,920	0/0:28,0:27:81.28:0,81,1364	0/0:24,0:24:69.22:0,69,1120	0/0:12,0:12:27.09:0,27,460
chr10	75744235	.	TAGTTGTGTAGTGAGAGTGCACAGGAGGTAC	T	1171.80	PASS	AB=0.931;AC=6;AF=0.107;AN=56;BaseQRankSum=2.813;DP=1271;FS=4.052;HRun=0;HaplotypeScore=602.0530;InbreedingCoeff=-0.1323;MQ=48.56;MQ0=61;MQRankSum=0.169;QD=2.33;ReadPosRankSum=-0.025;VQSLOD=-0.4329;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:81,0:54:99:274,0,696	0/0:9,0:9:27.09:0,27,448	0/0:34,0:4:8.15:0,8,114	0/0:54,0:5:2.27:0,2,61	0/0:32,0:32:87.27:0,87,1406	0/0:17,0:17:45.15:0,45,727	0/0:32,0:32:75.23:0,75,1140	0/0:59,0:58:99:0,138,1800	0/1:133,0:110:99:336,0,265	0/0:33,0:33:90.29:0,90,1408	0/0:29,0:29:78.21:0,78,1349	0/1:42,0:24:99:471,0,101	0/1:45,0:24:99:151,0,334	0/0:34,0:34:90.30:0,90,1511	0/0:56,0:56:99:0,147,2203	0/0:64,0:64:99:0,112,2466	0/0:10,0:10:30.10:0,30,502	0/0:12,0:11:24.50:0,24,416	0/0:24,0:20:51.13:0,51,808	0/0:33,0:32:87.26:0,87,1475	0/0:82,0:79:99:0,207,3353	0/1:32,80:101:34.88:35,0,342	0/0:18,30:40:14.75:0,15,190	0/1:89,0:75:29.36:29,0,264	0/0:30,0:30:75.10:0,75,1163	0/0:32,0:32:84.28:0,84,1306	0/0:22,0:22:66.22:0,66,1254	0/0:23,0:23:66.22:0,66,1021
chr10	75744238	.	T	TTG	1330.56	PASS	AB=0.802;AC=6;AF=0.107;AN=56;BaseQRankSum=4.311;DP=1288;FS=2.863;HRun=0;HaplotypeScore=151.6194;InbreedingCoeff=-0.1279;MQ=48.49;MQ0=63;MQRankSum=1.612;QD=2.58;ReadPosRankSum=-0.447;VQSLOD=2.6887;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:66,17:56:99:286,0,609	0/0:9,0:9:27.09:0,27,369	0/0:34,0:4:9.03:0,9,122	0/0:48,0:5:6.02:0,6,70	0/0:34,0:34:87.29:0,87,1194	0/0:18,0:18:45.15:0,45,618	0/0:29,0:29:75.23:0,75,1012	0/0:60,0:57:99:0,144,1923	0/1:31,102:110:99:331,0,299	0/0:36,0:36:99:0,99,1311	0/0:31,0:31:81.26:0,81,1097	0/1:32,14:26:99:477,0,155	0/1:31,16:24:99:176,0,384	0/0:34,0:34:90.30:0,90,1234	0/0:56,0:56:99:0,150,2039	0/0:60,1:61:99:0,112,2120	0/0:12,0:12:33.09:0,33,436	0/0:12,0:11:24.08:0,24,330	0/0:23,0:19:57.19:0,57,778	0/0:34,0:33:90.23:0,90,1218	0/0:81,2:80:99:0,208,2837	0/1:112,0:100:99:122,0,370	0/0:46,1:38:14.96:0,15,206	0/1:84,10:79:63.11:63,0,262	0/0:31,0:31:72.24:0,72,987	0/0:34,0:34:84.28:0,84,1154	0/0:22,0:22:66.22:0,66,906	0/0:23,0:23:66.22:0,66,907
chr10	75744242	.	G	GTG	1362.87	PASS	AB=0.870;AC=6;AF=0.107;AN=56;BaseQRankSum=4.546;DP=1297;FS=3.736;HRun=0;HaplotypeScore=152.6587;InbreedingCoeff=-0.1279;MQ=48.24;MQ0=72;MQRankSum=0.567;QD=2.58;ReadPosRankSum=-1.885;VQSLOD=2.3259;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:82,0:59:99:286,0,609	0/0:9,0:9:27.09:0,27,369	0/0:32,0:4:9.03:0,9,122	0/0:48,0:5:6.02:0,6,70	0/0:33,0:33:87.29:0,87,1194	0/0:18,0:18:45.15:0,45,618	0/0:28,0:28:75.23:0,75,1012	0/0:60,0:53:99:0,144,1923	0/1:130,0:111:99:331,0,299	0/0:37,0:37:99:0,99,1314	0/0:33,0:33:81.26:0,81,1097	0/1:41,0:29:99:477,0,155	0/1:42,0:27:99:208,0,366	0/0:33,0:33:90.30:0,90,1234	0/0:53,0:53:99:0,150,2039	0/0:57,0:57:99:0,112,2120	0/0:14,0:14:33.09:0,33,436	0/0:11,0:10:24.08:0,24,330	0/0:22,0:19:57.18:0,57,765	0/0:32,0:32:90.28:0,90,1218	0/0:86,0:82:99:0,208,2836	0/1:106,0:97:99:122,0,370	0/0:47,0:38:14.96:0,15,206	0/1:41,35:80:63.11:63,0,262	0/0:30,0:30:72.24:0,72,987	0/0:34,0:34:84.28:0,84,1154	0/0:25,0:25:66.22:0,66,906	0/0:24,0:24:66.22:0,66,907
chr10	75746858	.	CCGAGGTTTCTT	C	8107.26	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.571;DP=705;FS=2.036;HRun=0;HaplotypeScore=220.0814;InbreedingCoeff=0.9993;MQ=84.78;MQ0=0;MQRankSum=-13.441;QD=64.86;ReadPosRankSum=2.960;VQSLOD=4.6863;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,6132	0/0:11,0:11:33.11:0,33,1726	0/0:24,0:24:72.25:0,72,2805	0/0:25,0:25:71.42:0,71,2995	0/0:34,0:34:99:0,102,5618	0/0:31,0:31:93.32:0,93,5091	0/0:23,0:23:66.14:0,66,3050	0/0:26,0:26:78.22:0,78,3959	1/1:3,14:17:30.10:1087,30,0	0/0:19,0:19:57.19:0,57,2907	0/0:29,0:29:87.26:0,87,4726	1/1:1,32:33:63.22:2270,63,0	1/1:1,18:19:38.92:1406,39,0	0/0:30,0:30:90.31:0,90,4782	0/0:34,0:34:99:0,99,5145	0/0:32,0:32:96.33:0,96,5345	0/0:38,0:38:99:0,114,6295	0/0:20,0:20:60.21:0,60,3259	0/0:25,0:25:69.19:0,69,3256	0/0:27,0:27:78.27:0,78,4170	0/0:34,0:34:99:0,102,5126	1/1:0,20:20:38.81:1242,39,0	1/1:1,17:18:36.12:1294,36,0	1/1:0,18:18:24.08:809,24,0	0/0:23,0:23:69.24:0,69,3852	0/0:24,0:24:69.24:0,69,3871	0/0:23,0:23:69.22:0,69,3685	0/0:11,0:11:33.11:0,33,1922
chr10	75747239	.	AGTCTGT	A	3029.64	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=12.162;DP=678;FS=33.293;HRun=0;HaplotypeScore=156.4101;InbreedingCoeff=0.8799;MQ=74.51;MQ0=4;MQRankSum=-10.937;QD=20.75;ReadPosRankSum=2.316;VQSLOD=1.6816;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:65.43:243,0,65	0/0:5,0:5:15.04:0,15,471	0/0:39,0:32:82.29:0,82,1440	0/0:33,0:29:51.76:0,52,1154	0/0:10,0:10:30.03:0,30,766	0/0:31,0:31:87.24:0,87,2571	0/0:28,0:28:76.04:0,76,2130	0/0:30,0:30:87.16:0,87,1854	1/1:6,13:19:36.12:749,36,0	0/0:22,0:22:63.12:0,63,1585	0/0:12,0:12:36.04:0,36,901	1/1:12,18:30:45.12:895,45,0	1/1:6,21:27:42.14:856,42,0	0/0:18,0:18:54.13:0,54,1559	0/0:45,0:45:99:0,135,3866	0/0:35,0:35:99:0,102,3372	0/0:25,0:25:75.15:0,75,1951	0/0:33,0:33:98.11:0,98,2243	0/0:27,0:26:75.12:0,75,1610	0/0:10,0:10:30:0,30,817	0/0:31,0:31:89.76:0,90,2433	1/1:3,7:10:11.91:122,12,0	1/1:4,10:14:11.47:123,11,0	1/1:12,13:25:14.96:227,15,0	0/0:16,0:16:45.11:0,45,1366	0/0:29,0:29:87.20:0,87,2281	0/0:38,0:37:99:0,114,3131	0/0:14,0:14:38.99:0,39,856
chr10	75747240	.	GTCTGTC	G	3146.77	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.427;DP=679;FS=24.671;HRun=0;HaplotypeScore=155.3791;InbreedingCoeff=0.9746;MQ=74.45;MQ0=4;MQRankSum=-12.123;QD=22.01;ReadPosRankSum=0.393;VQSLOD=1.8265;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,16:21:18.06:368,18,0	0/0:5,0:5:12.04:0,12,387	0/0:40,0:32:30.08:0,30,744	0/0:35,0:29:37.22:0,37,756	0/0:11,0:11:21.07:0,21,687	0/0:30,0:30:75.24:0,75,2038	0/0:28,0:28:55.07:0,55,1673	0/0:30,0:30:42.14:0,42,1197	1/1:18,0:18:36.12:749,36,0	0/0:22,0:22:39.13:0,39,1208	0/0:12,0:12:21.07:0,21,685	1/1:30,0:30:45.12:895,45,0	1/1:27,0:27:42.14:856,42,0	0/0:18,0:18:45.13:0,45,1252	0/0:46,0:46:99:0,99,3216	0/0:36,0:36:90.31:0,90,2943	0/0:26,0:26:59.72:0,60,1605	0/0:33,0:33:59.42:0,59,1669	0/0:27,0:26:39.12:0,39,1062	0/0:10,0:10:21.07:0,21,636	0/0:31,0:31:60.21:0,60,1890	1/1:10,0:10:11.91:122,12,0	1/1:13,0:13:11.47:123,11,0	1/1:24,0:24:14.96:227,15,0	0/0:17,0:17:39.13:0,39,1216	0/0:29,0:29:54.19:0,54,1708	0/0:36,0:35:78.27:0,78,2517	0/0:14,0:14:21.07:0,21,604
chr10	75748350	.	CA	C	828.83	PASS	AB=0.855;AC=20;AF=0.357;AN=56;BaseQRankSum=5.069;DP=607;FS=0.000;HRun=15;HaplotypeScore=86.3769;InbreedingCoeff=0.3261;MQ=68.45;MQ0=5;MQRankSum=0.763;QD=2.85;ReadPosRankSum=3.849;VQSLOD=-0.1584;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:30:36.07:104,36,0	0/0:9,1:11:4.57:0,5,151	0/0:40,0:14:2.36:0,2,29	0/0:26,0:9:11.33:0,11,91	0/1:36,4:41:18.45:18,0,432	0/0:22,2:24:9.06:0,9,191	0/1:16,3:21:68.11:68,0,114	0/0:23,0:25:26.12:0,26,249	1/1:6,5:13:15.70:88,16,0	0/0:19,0:19:17.96:0,18,151	0/1:22,3:26:21.44:21,0,294	1/1:7,6:17:20.77:112,21,0	0/1:6,6:13:19.56:99,0,20	0/0:17,2:19:16.59:0,17,245	0/0:29,0:32:14.01:0,14,318	0/1:20,2:24:8.63:9,0,282	0/0:22,2:25:6.25:0,6,272	0/0:14,0:19:18.27:0,18,220	0/0:11,0:12:9.04:0,9,98	0/1:19,3:24:26.47:26,0,138	0/1:17,2:19:8.58:9,0,169	1/1:6,16:23:16.98:228,17,0	1/1:5,10:17:13.56:82,14,0	1/1:9,5:15:26.63:145,27,0	0/0:19,1:20:22.62:0,23,297	0/0:25,0:25:35.41:0,35,280	0/0:15,2:18:13.52:0,14,216	0/1:7,1:8:3.80:4,0,91
chr10	75749282	.	CT	C	232.99	PASS	AB=0.903;AC=8;AF=0.143;AN=56;BaseQRankSum=0.351;DP=571;FS=5.460;HRun=15;HaplotypeScore=86.2400;InbreedingCoeff=0.1286;MQ=55.79;MQ0=8;MQRankSum=1.525;QD=1.48;ReadPosRankSum=2.897;VQSLOD=-0.5877;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,23:38:9.36:291,9,0	0/1:10,1:11:1.27:1,0,113	0/0:13,0:10:11.99:0,12,103	0/1:11,0:7:4.96:5,0,10	0/0:17,3:20:8.60:0,9,190	0/0:16,0:17:21.50:0,22,204	0/0:21,1:23:22.57:0,23,311	0/1:21,3:23:9.38:9,0,202	0/0:14,0:22:26.96:0,27,153	0/0:19,2:21:10.72:0,11,218	0/0:11,0:10:14.95:0,15,125	0/0:15,0:17:34.17:0,34,214	0/0:12,0:15:16.67:0,17,71	0/0:25,0:25:28.53:0,29,349	0/0:24,2:26:18.42:0,18,380	0/0:24,2:26:28.41:0,28,333	0/0:34,4:38:2.46:0,2,362	0/0:11,2:12:10.70:0,11,213	0/0:23,1:25:28.50:0,29,350	0/1:22,2:25:8.80:9,0,149	0/1:11,3:14:30.82:31,0,128	0/0:9,0:12:24.04:0,24,120	0/0:7,0:16:17.75:0,18,96	0/0:12,0:18:10.74:0,11,61	0/0:21,1:21:9.99:0,10,275	0/1:26,4:30:0.85:1,0,349	0/0:25,1:26:9.18:0,9,299	0/0:6,0:5:11.69:0,12,105
chr10	75750194	.	AAG	A	4290.39	PASS	AB=0.531;AC=11;AF=0.196;AN=56;BaseQRankSum=10.007;DP=528;FS=1.339;HRun=0;HaplotypeScore=72.6217;InbreedingCoeff=0.9267;MQ=64.34;MQ0=4;MQRankSum=1.235;QD=36.67;ReadPosRankSum=2.146;VQSLOD=6.8540;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:75.16:0,75,1348	0/0:10,0:10:27.09:0,27,486	0/0:28,0:24:56.72:0,57,975	0/0:33,0:26:64.70:0,65,1062	0/0:19,0:19:57.20:0,57,1018	0/0:15,0:15:42.14:0,42,756	0/0:15,0:15:39.13:0,39,692	0/0:17,0:17:51.16:0,51,890	0/1:2,15:17:2.86:618,0,3	0/0:13,0:13:39.13:0,39,702	0/0:17,0:17:45.15:0,45,810	1/1:1,20:21:57.19:798,57,0	1/1:1,19:20:50.99:713,51,0	0/0:20,0:20:60.19:0,60,1047	0/0:24,0:23:72.25:0,72,1296	0/0:27,0:27:78.27:0,78,1405	0/0:20,0:20:57.20:0,57,1016	0/0:14,0:14:36.12:0,36,648	0/0:13,0:12:33.11:0,33,593	0/0:15,0:15:42.14:0,42,756	0/0:23,0:22:63.22:0,63,1130	1/1:1,17:18:51.10:692,51,0	1/1:0,18:18:44.96:630,45,0	1/1:2,21:23:60.20:840,60,0	0/0:12,0:12:33.11:0,33,594	0/0:12,0:12:33.11:0,33,594	0/0:14,0:14:42.14:0,42,747	0/0:16,0:16:45.15:0,45,810
chr10	75750230	.	TC	T	426.73	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.776;DP=536;FS=0.784;HRun=9;HaplotypeScore=72.9565;InbreedingCoeff=0.9611;MQ=68.82;MQ0=12;MQRankSum=0.104;QD=12.93;ReadPosRankSum=-0.268;VQSLOD=3.3879;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,25:33:57.02:522,57,0	0/0:8,0:8:18.02:0,18,177	0/0:40,0:19:22.15:0,22,296	0/0:41,0:22:17.55:0,18,178	0/0:20,0:21:60.06:0,60,621	0/0:15,0:13:39.07:0,39,417	0/0:12,0:12:21.05:0,21,234	0/0:24,0:25:26.97:0,27,292	0/0:15,0:15:39.12:0,39,450	0/0:17,0:17:33.08:0,33,359	0/0:16,0:16:33.10:0,33,381	0/0:22,0:23:53.34:0,53,568	0/0:19,0:19:44.97:0,45,499	0/0:19,0:19:48.13:0,48,544	0/0:18,0:17:54.09:0,54,594	0/0:17,0:17:45.12:0,45,508	0/0:24,0:24:66.18:0,66,750	0/0:9,0:9:24.02:0,24,252	0/0:21,0:21:48.06:0,48,503	0/0:19,0:19:33.09:0,33,373	0/0:20,0:20:51.08:0,51,544	0/0:11,0:11:26.98:0,27,260	0/0:23,0:22:45.91:0,46,484	0/0:15,0:15:24.06:0,24,266	0/0:12,0:12:27.08:0,27,311	0/0:10,0:10:18.05:0,18,207	0/0:16,0:16:42.12:0,42,483	0/0:15,0:16:44.93:0,45,453
chr10	75752573	.	TTG	T	936.38	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.177;DP=596;FS=0.785;HRun=0;HaplotypeScore=74.8360;InbreedingCoeff=0.9397;MQ=89.40;MQ0=0;MQRankSum=-0.307;QD=33.44;ReadPosRankSum=1.660;VQSLOD=5.7156;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:72.24:1031,72,0	0/0:3,0:3:9.03:0,9,149	0/0:27,0:27:68.04:0,68,1178	0/0:26,0:26:69.07:0,69,1138	0/0:21,0:21:54.19:0,54,986	0/0:23,0:23:60.18:0,60,1057	0/0:20,0:20:54.12:0,54,923	0/0:46,0:46:99:0,135,2397	0/0:21,0:21:57.19:0,57,1028	0/0:26,0:26:78.27:0,78,1421	0/0:8,0:8:21.07:0,21,384	0/0:26,0:26:75.26:0,75,1363	0/0:21,0:21:57.13:0,57,978	0/0:21,0:21:63.20:0,63,1122	0/0:33,0:33:96.31:0,96,1728	0/0:31,0:31:90.31:0,90,1615	0/0:17,0:17:48.16:0,48,870	0/0:8,0:8:24.08:0,24,440	0/0:16,0:16:48.16:0,48,872	0/0:16,0:16:48.11:0,48,823	0/0:33,0:33:93.30:0,93,1673	0/0:15,0:15:42.14:0,42,743	0/0:17,0:17:51.17:0,51,930	0/0:18,0:18:54.19:0,54,989	0/0:19,0:19:54.19:0,54,984	0/0:26,0:26:72.24:0,72,1293	0/0:16,0:16:39.13:0,39,706	0/0:14,0:14:42.14:0,42,769
chr10	75752891	.	C	CT	1192.91	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-4.511;DP=361;FS=13.310;HRun=3;HaplotypeScore=36.2698;InbreedingCoeff=0.8119;MQ=61.18;MQ0=21;MQRankSum=2.246;QD=23.86;ReadPosRankSum=0.445;VQSLOD=1.7463;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:33.02:0,33,375	0/0:3,0:3:9.03:0,9,108	0/0:3,0:3:5.92:0,6,39	0/1:8,0:7:18.16:18,0,126	0/0:23,0:23:66.03:0,66,750	0/0:22,0:22:63.13:0,63,734	0/0:8,0:6:18.06:0,18,215	0/0:35,0:25:72.14:0,72,828	1/1:1,7:7:21.04:273,21,0	0/0:10,0:10:30.02:0,30,328	0/0:15,0:14:39.04:0,39,448	1/1:1,9:10:24.08:334,24,0	1/1:2,8:10:21.07:287,21,0	0/0:9,0:9:15.15:0,15,210	0/0:11,0:11:30.02:0,30,340	0/0:10,0:10:26.98:0,27,290	0/0:28,0:27:66.15:0,66,770	0/0:23,0:19:45.04:0,45,505	0/0:14,0:13:36:0,36,376	0/0:10,0:10:30.07:0,30,335	0/0:3,0:3:6.02:0,6,72	1/1:0,3:3:9.03:126,9,0	1/1:0,7:7:18.06:252,18,0	1/1:0,3:3:6.02:84,6,0	0/0:16,0:16:48.02:0,48,526	0/0:12,0:11:30.05:0,30,343	0/0:23,0:23:57.03:0,57,623	0/0:16,0:15:45.10:0,45,523
chr10	75753453	.	T	TAC	1840.54	PASS	AB=0.598;AC=10;AF=0.179;AN=56;BaseQRankSum=-3.546;DP=509;FS=13.420;HRun=0;HaplotypeScore=69.3649;InbreedingCoeff=0.4309;MQ=67.53;MQ0=6;MQRankSum=0.980;QD=16.58;ReadPosRankSum=-1.565;VQSLOD=2.0688;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:29:15.28:114,15,0	0/0:4,0:7:17.30:0,17,141	0/0:23,0:13:12.03:0,12,134	0/0:18,0:11:2.55:0,3,21	0/0:28,0:29:50.96:0,51,552	0/0:14,0:14:30.09:0,30,343	0/0:10,0:10:21.04:0,21,228	0/0:27,0:27:30.09:0,30,343	0/1:4,10:14:16.68:384,0,17	0/0:31,1:33:16.23:0,16,569	0/0:20,0:24:50.95:0,51,519	0/1:6,15:22:20.34:583,0,20	1/1:10,6:17:26.95:356,27,0	0/0:13,0:13:30.50:0,30,320	0/0:20,0:20:48.12:0,48,537	0/0:19,0:20:47.95:0,48,518	0/0:11,0:12:17.88:0,18,186	0/0:24,0:25:56.99:0,57,631	0/0:10,0:12:14.87:0,15,151	0/0:14,0:16:38.78:0,39,404	0/0:11,0:12:23.90:0,24,254	1/1:1,1:2:3.01:46,3,0	0/1:5,9:14:10.64:300,0,11	0/1:5,7:13:34.95:211,0,35	0/0:24,0:27:56.80:0,57,594	0/0:15,0:17:29.91:0,30,318	0/0:22,0:23:56.99:0,57,631	0/0:12,0:14:26.74:0,27,262
chr10	75756595	.	G	GT	7208.07	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-14.145;DP=665;FS=1.434;HRun=2;HaplotypeScore=57.2761;InbreedingCoeff=0.9647;MQ=87.57;MQ0=0;MQRankSum=-2.880;QD=38.55;ReadPosRankSum=2.962;VQSLOD=5.3982;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,42:42:99:1684,117,0	0/0:9,0:9:27.07:0,27,322	0/0:19,0:19:54.17:0,54,661	0/0:30,0:30:78.17:0,78,927	0/0:29,0:29:87.20:0,87,1032	0/0:27,0:27:81.25:0,81,1004	0/0:22,0:22:60.18:0,60,731	0/0:31,0:31:87.26:0,87,1057	1/1:1,23:24:66.22:950,66,0	0/0:23,0:23:69.21:0,69,847	0/0:15,0:15:42.12:0,42,508	1/1:1,26:27:75.25:1077,75,0	1/1:3,31:34:87.29:1253,87,0	0/0:32,0:32:93.28:0,93,1140	0/0:26,0:26:78.21:0,78,929	0/0:34,1:35:59.07:0,59,1155	0/0:19,0:19:57.18:0,57,706	0/0:16,1:17:2.21:0,2,477	0/0:20,0:20:54.14:0,54,645	0/0:19,0:19:54.17:0,54,669	0/0:19,0:19:51.16:0,51,632	1/1:1,17:18:48.16:691,48,0	1/1:0,19:19:57.19:821,57,0	1/1:1,21:22:51.17:733,51,0	0/0:14,0:14:42.13:0,42,521	0/0:25,0:25:75.24:0,75,930	0/0:32,0:32:96.29:0,96,1179	0/0:15,0:15:45.12:0,45,541
chr10	75757772	.	A	AT	2237.50	PASS	AB=0.864;AC=16;AF=0.286;AN=56;BaseQRankSum=-3.603;DP=535;FS=5.033;HRun=11;HaplotypeScore=55.4463;InbreedingCoeff=0.6948;MQ=72.51;MQ0=1;MQRankSum=-0.816;QD=12.29;ReadPosRankSum=0.064;VQSLOD=3.1529;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:29:54.14:287,54,0	0/0:7,0:7:17.92:0,18,138	0/1:11,0:11:19.48:19,0,27	0/1:11,0:11:0.49:0,0,52	0/0:28,0:28:65.68:0,66,507	0/0:23,0:24:42.90:0,43,455	0/0:19,1:20:23.30:0,23,356	0/0:31,0:31:77.64:0,78,595	0/1:2,10:12:16.41:214,0,16	0/0:21,0:21:50.78:0,51,393	0/0:19,1:20:23.31:0,23,361	1/1:2,20:23:44.92:441,45,0	1/1:6,17:24:4.63:407,5,0	0/0:12,0:12:32.87:0,33,255	0/0:20,0:22:55.81:0,56,421	0/0:23,1:24:31.38:0,31,429	0/0:10,0:10:29.86:0,30,229	0/0:11,0:11:20.91:0,21,162	0/0:18,0:19:43.85:0,44,329	0/1:18,2:20:0.56:1,0,358	0/0:11,0:11:26.26:0,26,194	1/1:4,16:20:21.77:381,22,0	1/1:3,17:20:39.04:427,39,0	1/1:1,10:11:24.52:245,25,0	0/0:15,0:15:38.82:0,39,298	0/0:26,0:26:67.52:0,68,504	0/0:26,1:28:49.27:0,49,553	0/0:24,0:24:68.67:0,69,528
chr10	75758250	.	ATTT	A	4073.84	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.314;DP=628;FS=17.605;HRun=12;HaplotypeScore=92.6470;InbreedingCoeff=0.9920;MQ=68.69;MQ0=2;MQRankSum=-2.542;QD=25.78;ReadPosRankSum=4.147;VQSLOD=0.9665;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:63.13:796,63,0	0/0:7,0:7:18.06:0,18,311	0/0:14,0:14:24.74:0,25,350	0/0:7,0:5:12:0,12,197	0/0:34,0:34:90.30:0,90,1685	0/0:17,0:21:51.15:0,51,953	0/0:12,0:14:39.06:0,39,633	0/0:30,0:34:72.19:0,72,1306	1/1:7,20:27:45.09:569,45,0	0/0:27,0:28:75.21:0,75,1379	0/0:25,0:26:63.19:0,63,1165	1/1:4,25:29:51.13:644,51,0	1/1:3,11:14:29.98:360,30,0	0/0:19,0:21:63.16:0,63,1123	0/0:31,0:34:93.27:0,93,1677	0/0:31,0:33:87.25:0,87,1590	0/0:25,0:26:66.23:0,66,1274	0/0:23,0:24:54.18:0,54,1010	0/0:13,0:13:30.09:0,30,543	0/0:14,0:16:42.12:0,42,776	0/0:11,0:11:24.08:0,24,464	1/1:1,22:23:57.15:720,57,0	1/1:4,17:21:42.07:531,42,0	1/1:0,16:16:36.11:455,36,0	0/0:22,0:25:72.22:0,72,1323	0/0:25,0:25:72.23:0,72,1319	0/0:29,0:31:87.25:0,87,1596	0/0:23,0:25:63.19:0,63,1190
chr10	75758453	.	T	TG	5914.19	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-11.856;DP=602;FS=1.147;HRun=2;HaplotypeScore=57.1680;InbreedingCoeff=0.9936;MQ=69.77;MQ0=0;MQRankSum=-2.572;QD=38.65;ReadPosRankSum=4.094;VQSLOD=5.3302;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:42:99:1641,114,0	0/0:5,0:5:15.05:0,15,186	0/0:20,0:18:50.18:0,50,591	0/0:20,0:20:51.04:0,51,578	0/0:22,0:22:60.08:0,60,722	0/0:19,0:19:51.13:0,51,606	0/0:22,0:22:66.21:0,66,818	0/0:37,0:37:99:0,105,1246	1/1:2,17:19:51.17:733,51,0	0/0:13,0:13:33.10:0,33,403	0/0:7,0:7:15.05:0,15,186	1/1:1,21:22:60.20:863,60,0	1/1:0,21:21:57.19:820,57,0	0/0:26,0:26:78.23:0,78,954	0/0:40,0:40:99:0,120,1473	0/0:29,0:28:87.27:0,87,1079	0/0:34,0:34:99:0,102,1264	0/0:27,0:27:66.21:0,66,817	0/0:14,0:14:36.07:0,36,429	0/0:15,0:15:45.14:0,45,558	0/0:31,0:31:87.25:0,87,1053	1/1:0,8:8:24.08:346,24,0	1/1:0,12:12:33.11:475,33,0	1/1:0,29:29:72.24:1037,72,0	0/0:14,0:14:39.12:0,39,484	0/0:21,0:21:57.18:0,57,706	0/0:23,0:23:69.22:0,69,854	0/0:10,0:10:30.09:0,30,372
chr10	75758739	.	CA	C	3081.31	PASS	AB=0.917;AC=15;AF=0.268;AN=56;BaseQRankSum=11.822;DP=568;FS=0.376;HRun=9;HaplotypeScore=54.0686;InbreedingCoeff=0.9021;MQ=61.30;MQ0=0;MQRankSum=0.824;QD=20.27;ReadPosRankSum=1.741;VQSLOD=4.1567;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:37:93.05:851,93,0	0/0:8,0:8:18.05:0,18,208	0/0:12,0:10:9.80:0,10,255	0/1:9,1:10:14.45:14,0,187	0/0:29,0:29:81.23:0,81,926	0/0:19,0:19:54.16:0,54,623	0/0:11,0:11:30.09:0,30,346	0/0:27,0:27:69.20:0,69,789	1/1:3,13:16:36.01:330,36,0	0/0:14,0:14:36.09:0,36,405	0/0:16,0:16:48.13:0,48,545	1/1:1,21:22:57.03:521,57,0	1/1:2,13:15:39.02:357,39,0	0/0:21,0:21:60.18:0,60,692	0/0:15,0:15:36.11:0,36,415	0/0:19,0:19:42.12:0,42,485	0/0:35,1:36:68.67:0,69,1014	0/0:29,0:29:84.23:0,84,958	0/0:28,0:27:60.18:0,60,693	0/0:24,0:24:57.17:0,57,658	0/0:18,0:18:51.14:0,51,578	1/1:1,13:14:30.01:275,30,0	1/1:0,18:18:51.03:467,51,0	1/1:1,18:19:51.03:467,51,0	0/0:15,0:15:45.13:0,45,519	0/0:25,0:25:69.19:0,69,780	0/0:30,0:29:84.25:0,84,968	0/0:19,0:19:54.13:0,54,610
chr10	75759971	.	C	CTTA	4268.79	PASS	AB=0.625;AC=13;AF=0.232;AN=56;BaseQRankSum=11.843;DP=526;FS=75.610;HRun=0;HaplotypeScore=94.6503;InbreedingCoeff=0.8926;MQ=82.49;MQ0=0;MQRankSum=-9.646;QD=55.44;ReadPosRankSum=0.548;VQSLOD=1.4145;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,6:8:24.08:543,24,0	0/0:8,0:8:24.08:0,24,409	0/0:24,0:24:72.25:0,72,1207	0/0:16,0:16:42.14:0,42,692	0/0:15,0:15:42.14:0,42,710	0/0:22,0:22:63.20:0,63,1047	0/0:24,0:24:72.25:0,72,1217	0/0:21,0:21:57.18:0,57,919	0/1:4,6:10:24.12:474,0,24	0/0:29,0:28:84.27:0,84,1380	0/0:17,0:17:42.13:0,42,676	1/1:5,13:18:51.05:1040,51,0	1/1:6,9:15:33.09:712,33,0	0/0:28,0:28:81.28:0,81,1380	0/0:33,0:33:96.31:0,96,1602	0/0:34,0:34:96.33:0,96,1636	0/0:24,0:24:66.23:0,66,1125	0/0:18,0:18:48.16:0,48,818	0/0:25,0:25:69.22:0,69,1149	0/0:12,0:12:30.09:0,30,485	0/0:13,0:13:36.12:0,36,614	1/1:1,11:12:36.06:776,36,0	1/1:2,6:8:23.93:448,24,0	1/1:2,4:6:12.04:276,12,0	0/0:22,0:22:57.19:0,57,970	0/0:27,0:27:75.24:0,75,1248	0/0:22,0:22:60.19:0,60,994	0/0:15,0:15:45.15:0,45,767
chr10	75759996	.	TTAA	T	3936.98	PASS	AB=0.522;AC=13;AF=0.232;AN=56;BaseQRankSum=14.505;DP=579;FS=50.168;HRun=0;HaplotypeScore=110.4743;InbreedingCoeff=0.8960;MQ=81.09;MQ0=0;MQRankSum=-14.344;QD=42.33;ReadPosRankSum=-0.210;VQSLOD=2.2024;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:27.02:379,27,0	0/0:10,0:10:27.09:0,27,595	0/0:26,0:26:72.25:0,72,1447	0/0:16,0:16:39.13:0,39,818	0/0:21,0:21:60.21:0,60,1297	0/0:28,0:28:72.23:0,72,1514	0/0:20,0:20:60.21:0,60,1308	0/0:21,0:21:54.19:0,54,1192	0/1:1,11:12:30.12:494,0,30	0/0:25,0:25:72.25:0,72,1579	0/0:12,0:12:30.10:0,30,660	1/1:2,22:22:63.21:1010,63,0	1/1:2,15:17:45.15:720,45,0	0/0:35,0:35:99:0,99,2169	0/0:42,0:42:99:0,114,2445	0/0:38,0:38:99:0,105,2300	0/0:15,0:15:33.11:0,33,729	0/0:19,0:19:54.19:0,54,1192	0/0:26,0:26:60.21:0,60,1311	0/0:18,0:18:54.19:0,54,1184	0/0:15,0:15:39.13:0,39,861	1/1:1,13:14:39.13:611,39,0	1/1:0,11:11:30.10:481,30,0	1/1:1,5:6:15.05:241,15,0	0/0:24,0:24:69.24:0,69,1495	0/0:36,0:36:99:0,99,2090	0/0:23,0:23:63.22:0,63,1390	0/0:16,0:16:45.15:0,45,935
chr10	75760036	.	AT	A	3720.04	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.711;DP=665;FS=9.189;HRun=4;HaplotypeScore=99.7890;InbreedingCoeff=0.9982;MQ=72.92;MQ0=0;MQRankSum=-9.028;QD=30.24;ReadPosRankSum=-1.063;VQSLOD=2.6237;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:20.52:140,21,0	0/0:11,0:11:30.10:0,30,420	0/0:29,0:29:72.23:0,72,979	0/0:13,0:11:33.11:0,33,462	0/0:34,0:34:87.25:0,87,1196	0/0:25,0:25:69.23:0,69,966	0/0:24,0:24:66.22:0,66,924	0/0:31,0:31:87.28:0,87,1204	1/1:1,18:19:51.16:611,51,0	0/0:40,0:40:99:0,108,1510	0/0:13,0:13:36.03:0,36,460	1/1:3,27:28:75.23:896,75,0	1/1:1,21:22:63.19:754,63,0	0/0:29,0:29:75.21:0,75,1027	0/0:48,0:48:99:0,138,1872	0/0:33,0:33:87.29:0,87,1218	0/0:18,0:18:54.18:0,54,756	0/0:19,0:19:54.18:0,54,756	0/0:23,0:22:60.20:0,60,838	0/0:23,0:23:69.16:0,69,924	0/0:22,0:22:63.21:0,63,882	1/1:2,17:19:48.15:575,48,0	1/1:3,14:17:42.12:493,42,0	1/1:0,8:8:21.06:251,21,0	0/0:28,0:28:81.27:0,81,1133	0/0:36,0:36:99:0,102,1428	0/0:30,0:30:81.23:0,81,1111	0/0:13,0:13:39.13:0,39,546
chr10	75760039	.	TTACTG	T	461	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.132;DP=664;FS=2.763;HRun=0;HaplotypeScore=160.2861;InbreedingCoeff=0.9944;MQ=72.73;MQ0=0;MQRankSum=-3.083;QD=51.22;ReadPosRankSum=-2.143;VQSLOD=3.6625;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:9:27.05:555,27,0	0/0:12,0:12:33.11:0,33,1067	0/0:28,0:28:81.28:0,81,2275	0/0:15,0:13:38.80:0,39,1116	0/0:34,0:34:90.31:0,90,2941	0/0:25,0:25:69.24:0,69,2296	0/0:22,0:22:66.23:0,66,2015	0/0:31,0:31:93.32:0,93,2862	0/0:19,0:19:54.18:0,54,775	0/0:38,0:38:99:0,114,3411	0/0:13,0:13:36.12:0,36,1150	0/0:28,0:26:39.30:0,39,954	0/0:22,0:22:66.22:0,66,929	0/0:29,0:29:78.27:0,78,2500	0/0:49,0:49:99:0,129,4443	0/0:31,0:31:87.30:0,87,2780	0/0:19,0:19:57.20:0,57,1846	0/0:20,0:20:57.16:0,57,1750	0/0:21,0:20:60.21:0,60,1824	0/0:24,0:24:72.25:0,72,2219	0/0:22,0:22:66.23:0,66,2112	0/0:18,0:18:54.18:0,54,788	0/0:16,0:16:45.15:0,45,635	0/0:8,0:8:21.07:0,21,287	0/0:27,0:27:81.28:0,81,2509	0/0:37,0:37:99:0,111,3399	0/0:32,0:32:87.30:0,87,2611	0/0:15,0:15:45.15:0,45,1432
chr10	75760138	.	AGGT	A	240.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.068;DP=744;FS=18.683;HRun=0;HaplotypeScore=120.3130;InbreedingCoeff=0.9876;MQ=70.11;MQ0=0;MQRankSum=-3.606;QD=21.87;ReadPosRankSum=-3.114;VQSLOD=1.4997;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,7:11:30:335,30,0	0/0:17,0:17:51.16:0,51,1192	0/0:16,0:16:48.16:0,48,1150	0/0:19,0:19:57.17:0,57,1306	0/0:20,0:20:53.67:0,54,1219	0/0:32,0:32:96.33:0,96,2361	0/0:38,0:38:99:0,114,2758	0/0:25,0:25:75.25:0,75,1803	0/0:23,0:23:16.36:0,16,839	0/0:28,0:27:84.29:0,84,2045	0/0:12,0:12:33.11:0,33,801	0/0:31,0:31:90.30:0,90,1384	0/0:33,0:33:74.41:0,74,1444	0/0:30,0:30:90.30:0,90,2162	0/0:55,0:55:99:0,166,4034	0/0:37,0:37:99:0,111,2735	0/0:34,0:34:99:0,102,2397	0/0:17,0:17:48.10:0,48,1077	0/0:26,0:26:78.23:0,78,1763	0/0:30,0:30:90.29:0,90,2118	0/0:37,0:37:99:0,111,2710	0/0:28,0:28:84.28:0,84,1241	0/0:24,0:24:72.24:0,72,1055	0/0:21,0:21:40.22:0,40,821	0/0:28,0:28:84.25:0,84,2011	0/0:29,0:29:87.30:0,87,2143	0/0:28,0:28:84.27:0,84,2019	0/0:15,0:15:45.15:0,45,1109
chr10	75760143	.	GGC	G	35.30	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.535;DP=743;FS=17.802;HRun=0;HaplotypeScore=104.2744;InbreedingCoeff=0.9953;MQ=73.13;MQ0=0;MQRankSum=-3.687;QD=4.41;ReadPosRankSum=-1.158;VQSLOD=0.9466;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,7:8:20.62:127,21,0	0/0:15,0:15:45.11:0,45,873	0/0:21,0:21:62.70:0,63,1209	0/0:19,0:19:57.19:0,57,1096	0/0:18,0:18:44.87:0,45,849	0/0:31,0:31:93.32:0,93,1889	0/0:39,0:39:99:0,117,2255	0/0:27,0:27:81.28:0,81,1646	0/0:20,0:20:57.20:0,57,1156	0/0:29,0:28:87.30:0,87,1752	0/0:14,0:14:36.12:0,36,721	0/0:31,0:31:90.31:0,90,1810	0/0:35,0:35:99:0,102,2003	0/0:28,0:28:84.29:0,84,1697	0/0:56,0:56:99:0,169,3339	0/0:37,0:37:99:0,111,2245	0/0:32,0:32:96.33:0,96,1946	0/0:15,0:15:45.11:0,45,870	0/0:25,0:25:75.25:0,75,1456	0/0:27,0:27:81.28:0,81,1633	0/0:36,0:36:99:0,108,2179	0/0:30,0:30:90.30:0,90,1781	0/0:25,0:25:75.26:0,75,1521	0/0:21,0:21:57.20:0,57,1149	0/0:30,0:30:84.29:0,84,1695	0/0:29,0:29:87.30:0,87,1765	0/0:28,0:28:84.29:0,84,1705	0/0:17,0:17:51.17:0,51,1007
chr10	75760148	.	TG	T	63.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.183;DP=748;FS=14.810;HRun=1;HaplotypeScore=88.3860;InbreedingCoeff=0.9925;MQ=75.86;MQ0=0;MQRankSum=-4.041;QD=7.88;ReadPosRankSum=-0.145;VQSLOD=-0.4877;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,7:8:18.45:154,18,0	0/0:15,0:15:45.15:0,45,695	0/0:26,0:26:75.15:0,75,1076	0/0:19,0:19:56.11:0,56,812	0/0:18,0:18:44.98:0,45,631	0/0:30,0:30:90.31:0,90,1407	0/0:34,0:34:99:0,102,1437	0/0:30,0:30:90.28:0,90,1348	0/0:20,0:20:57.19:0,57,888	0/0:30,0:29:90.28:0,90,1328	0/0:15,0:15:45.15:0,45,693	0/0:34,0:34:99:0,102,1470	0/0:34,0:34:99:0,99,1486	0/0:28,0:28:84.26:0,84,1268	0/0:53,0:53:99:0,159,2449	0/0:37,0:37:99:0,111,1666	0/0:33,0:33:99:0,99,1476	0/0:14,0:14:42.14:0,42,657	0/0:26,0:26:78.27:0,78,1221	0/0:27,0:27:78.26:0,78,1216	0/0:35,0:35:99:0,105,1574	0/0:29,0:29:87.21:0,87,1306	0/0:24,0:24:72.16:0,72,1073	0/0:20,0:20:57.19:0,57,880	0/0:33,0:33:96.21:0,96,1433	0/0:32,0:32:96.31:0,96,1458	0/0:29,0:29:87.19:0,87,1307	0/0:15,0:15:45.15:0,45,703
chr10	75760182	.	CCTT	C	466.18	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.862;DP=758;FS=0.000;HRun=0;HaplotypeScore=113.2963;InbreedingCoeff=0.9986;MQ=71.77;MQ0=0;MQRankSum=-4.229;QD=29.14;ReadPosRankSum=-0.813;VQSLOD=3.4748;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:33.11:561,33,0	0/0:10,0:10:27.09:0,27,622	0/0:33,0:33:93.32:0,93,2059	0/0:18,0:18:50.53:0,51,974	0/0:15,0:15:39.13:0,39,899	0/0:26,0:26:78.27:0,78,1780	0/0:38,0:38:99:0,108,2489	0/0:25,0:25:75.25:0,75,1599	0/0:29,0:29:87.30:0,87,2003	0/0:19,0:19:54.19:0,54,1243	0/0:18,0:18:54.03:0,54,1123	0/0:30,0:30:81.26:0,81,1803	0/0:31,0:31:93.28:0,93,2075	0/0:27,0:27:78.27:0,78,1766	0/0:55,0:55:99:0,160,3621	0/0:42,0:42:99:0,117,2699	0/0:26,0:26:78.27:0,78,1750	0/0:13,0:13:39.13:0,39,899	0/0:29,0:29:84.24:0,84,1750	0/0:31,0:31:87.29:0,87,1857	0/0:43,0:43:99:0,129,2906	0/0:25,0:25:71.98:0,72,1569	0/0:15,0:15:42.14:0,42,968	0/0:24,0:24:69.24:0,69,1590	0/0:39,0:39:99:0,114,2573	0/0:33,0:33:99:0,99,2231	0/0:33,0:33:93.32:0,93,2136	0/0:15,0:15:45.13:0,45,992
chr10	75760367	.	C	CTG	1081.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.884;DP=807;FS=0.825;HRun=0;HaplotypeScore=105.8888;InbreedingCoeff=0.9977;MQ=62.51;MQ0=3;MQRankSum=-3.536;QD=28.47;ReadPosRankSum=-2.194;VQSLOD=4.2807;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:33:63.22:1177,63,0	0/0:12,0:12:33.11:0,33,485	0/0:22,0:18:45.15:0,45,637	0/0:27,0:24:63.03:0,63,866	0/0:33,0:33:99:0,99,1456	0/0:20,0:20:60.20:0,60,884	0/0:27,0:27:78.24:0,78,1109	0/0:32,0:32:96.32:0,96,1413	0/0:34,0:34:99:0,99,1436	0/0:30,0:30:87.29:0,87,1281	0/0:23,0:23:66.22:0,66,972	0/0:22,0:22:66.21:0,66,951	0/0:37,0:36:99:0,108,1567	0/0:17,0:17:51.17:0,51,749	0/0:46,0:46:99:0,132,1940	0/0:56,0:56:99:0,169,2432	0/0:27,0:27:78.22:0,78,1102	0/0:19,0:19:57.16:0,57,816	0/0:19,0:19:54.16:0,54,746	0/0:23,0:23:69.23:0,69,1016	0/0:40,0:40:99:0,117,1701	0/0:32,0:32:93.31:0,93,1363	0/0:31,0:31:90.29:0,90,1303	0/0:35,0:35:99:0,99,1453	0/0:31,0:31:90.29:0,90,1305	0/0:27,0:27:75.24:0,75,1087	0/0:37,0:36:99:0,108,1590	0/0:10,0:10:24.08:0,24,353
chr10	75760749	.	TC	T	1829.97	PASS	AB=0.971;AC=16;AF=0.286;AN=56;BaseQRankSum=13.621;DP=535;FS=28.024;HRun=1;HaplotypeScore=70.5203;InbreedingCoeff=0.8605;MQ=62.16;MQ0=0;MQRankSum=4.539;QD=12.80;ReadPosRankSum=3.494;VQSLOD=0.9143;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:50.81:394,51,0	0/0:10,0:10:30.06:0,30,404	0/1:15,1:15:20.39:20,0,194	0/1:7,0:5:0.89:1,0,63	0/0:23,0:23:52.30:0,52,734	0/0:24,0:24:62.87:0,63,874	0/0:9,0:9:27.08:0,27,387	0/0:47,0:47:99:0,116,1621	1/1:2,8:11:23.13:168,23,0	0/0:18,0:18:53.19:0,53,739	0/0:23,0:23:61.92:0,62,834	1/1:2,17:20:55.98:418,56,0	1/1:4,20:24:56.78:440,57,0	0/0:13,0:13:36.09:0,36,491	0/0:21,0:21:54.15:0,54,758	0/0:24,0:24:48.20:0,48,877	0/0:19,0:19:51.98:0,52,685	0/0:18,0:18:51.16:0,51,749	0/0:26,0:26:66.87:0,67,805	0/0:17,0:17:48.91:0,49,670	0/0:8,0:8:23.82:0,24,332	1/1:4,7:11:20.92:162,21,0	1/1:2,11:14:26.13:193,26,0	1/1:6,10:15:29.89:232,30,0	0/0:20,1:21:57.14:0,57,793	0/0:25,0:25:51.09:0,51,929	0/0:27,0:27:78.08:0,78,1008	0/0:19,0:19:57.16:0,57,825
chr10	75760750	.	CA	C	1829.55	PASS	AB=0.885;AC=16;AF=0.286;AN=56;BaseQRankSum=12.806;DP=550;FS=15.999;HRun=12;HaplotypeScore=70.2687;InbreedingCoeff=0.8013;MQ=62.82;MQ0=0;MQRankSum=0.824;QD=11.16;ReadPosRankSum=2.697;VQSLOD=1.4941;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:50.70:394,51,0	0/0:10,0:10:21.04:0,21,213	0/1:13,1:15:18.94:19,0,94	0/0:8,0:6:6.76:0,7,42	0/0:23,2:25:14.03:0,14,473	0/0:21,1:24:36.54:0,37,518	0/0:9,0:9:24.04:0,24,237	0/0:42,1:46:64.08:0,64,798	1/1:11,0:11:22.94:166,23,0	0/0:18,1:19:21.85:0,22,402	0/0:21,2:23:10.46:0,10,448	1/1:20,0:20:55.79:417,56,0	1/1:24,0:24:56.65:440,57,0	0/0:15,0:16:35.84:0,36,332	0/0:21,0:21:55.70:0,56,517	0/0:23,1:25:17.08:0,17,493	0/0:20,2:22:10.48:0,10,430	0/0:17,0:19:50.85:0,51,484	0/1:24,2:26:7.40:7,0,296	0/0:16,1:17:18.84:0,19,367	0/0:7,0:8:23.88:0,24,227	1/1:10,0:10:20.90:162,21,0	1/1:14,0:14:25.94:191,26,0	1/1:17,0:16:29.87:231,30,0	0/0:21,0:21:48.09:0,48,482	0/0:22,3:25:19.76:0,20,542	0/0:29,0:29:64.56:0,65,654	0/0:17,0:18:51.38:0,51,493
chr10	75760892	.	TTTTA	T	2932.64	PASS	AB=0.611;AC=11;AF=0.196;AN=56;BaseQRankSum=11.001;DP=500;FS=1.679;HRun=0;HaplotypeScore=79.9524;InbreedingCoeff=0.8706;MQ=66.00;MQ0=1;MQRankSum=0.610;QD=30.55;ReadPosRankSum=3.617;VQSLOD=3.5860;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:39.13:0,39,973	0/0:8,0:8:21.07:0,21,524	0/0:11,0:9:17.64:0,18,278	0/0:7,0:4:8.99:0,9,149	0/0:28,0:28:78.23:0,78,1787	0/0:19,0:19:57.18:0,57,1362	0/0:13,0:13:33.10:0,33,714	0/0:34,0:34:72.20:0,72,1383	1/1:1,14:15:36.08:563,36,0	0/0:21,0:21:51.12:0,51,1125	0/0:29,0:29:78.14:0,78,1655	1/1:5,15:20:33.11:571,33,0	1/1:3,10:12:24.08:415,24,0	0/0:12,0:12:33.07:0,33,644	0/0:20,0:20:51.08:0,51,1094	0/0:19,0:19:51.17:0,51,1208	0/0:18,0:18:39.11:0,39,923	0/0:24,0:24:69.17:0,69,1492	0/0:28,0:27:63.17:0,63,1357	0/0:22,0:22:51.18:0,51,1271	0/0:10,0:10:24.08:0,24,599	1/1:0,13:13:33.03:504,33,0	1/1:4,20:24:48.07:753,48,0	0/1:4,7:11:99:304,0,123	0/0:17,0:17:48.12:0,48,1039	0/0:20,0:20:51.16:0,51,1162	0/0:20,0:20:54.19:0,54,1320	0/0:9,0:9:21.07:0,21,524
chr10	75761857	.	C	CT	639.30	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=6.424;DP=484;FS=14.645;HRun=13;HaplotypeScore=64.3893;InbreedingCoeff=0.8930;MQ=73.51;MQ0=8;MQRankSum=-3.899;QD=7.70;ReadPosRankSum=-0.609;VQSLOD=0.6759;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,11:19:50.17:506,50,0	0/0:4,0:4:12.01:0,12,109	0/0:49,0:12:17.21:0,17,77	0/0:26,0:13:1.76:0,2,49	0/0:29,0:29:41.36:0,41,584	0/0:13,0:13:28.20:0,28,249	0/0:9,0:9:26.97:0,27,239	0/0:38,0:38:69.39:0,69,602	1/1:11,0:13:16.23:70,16,0	0/0:11,0:11:18.81:0,19,210	0/0:25,0:25:44.11:0,44,480	1/1:13,0:13:8.92:36,9,0	1/1:18,0:18:12.67:65,13,0	0/0:12,0:12:29.99:0,30,263	0/0:13,0:13:36.01:0,36,325	0/0:18,0:18:45.64:0,46,383	0/0:21,0:21:48.71:0,49,474	0/0:20,0:20:37.85:0,38,472	0/0:20,0:20:34.10:0,34,346	0/0:18,0:18:43.57:0,44,380	0/0:8,0:8:5.20:0,5,163	1/1:7,0:7:15.47:60,15,0	1/1:5,0:5:8.22:37,8,0	1/1:7,0:8:12.22:51,12,0	0/0:17,0:17:41.97:0,42,369	0/0:19,0:19:47.37:0,47,411	0/0:19,0:19:30.26:0,30,360	0/0:10,0:10:20.45:0,20,173
chr10	75761858	.	T	TTC	1243.55	PASS	AB=0.705;AC=8;AF=0.143;AN=56;BaseQRankSum=5.505;DP=486;FS=2.227;HRun=0;HaplotypeScore=70.4699;InbreedingCoeff=0.3904;MQ=72.72;MQ0=7;MQRankSum=-2.586;QD=13.82;ReadPosRankSum=0.125;VQSLOD=3.0558;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:39.81:0,40,191	0/0:4,0:4:12.04:0,12,182	0/0:47,0:12:22.35:0,22,187	0/1:25,0:12:18.98:19,0,131	0/0:29,0:29:77.18:0,77,1066	0/0:13,0:13:39.02:0,39,506	0/0:9,0:9:27.09:0,27,409	0/0:39,0:39:99:0,102,1329	0/1:4,8:13:0.27:307,0,0	0/0:12,0:12:30.09:0,30,420	0/0:25,0:25:65.89:0,66,913	0/1:3,9:14:27.75:189,0,28	0/1:2,11:17:7.61:283,0,8	0/0:12,0:12:36.10:0,36,492	0/0:13,0:13:36.12:0,36,539	0/0:18,0:18:51.17:0,51,727	0/0:21,0:21:63.01:0,63,870	0/0:21,0:21:59.01:0,59,860	0/0:20,0:20:60.02:0,60,758	0/0:19,0:19:52.01:0,52,729	0/0:8,0:8:21.07:0,21,309	1/1:1,6:7:18.05:266,18,0	0/1:4,1:6:3.17:143,0,3	0/1:6,2:8:2.42:177,0,2	0/0:17,0:17:45.15:0,45,665	0/0:19,0:19:54.10:0,54,758	0/0:18,0:18:54.06:0,54,722	0/0:11,0:10:27:0,27,343
chr10	75762420	.	C	CG	25508.32	PASS	AB=0.695;AC=28;AF=0.500;AN=56;BaseQRankSum=28.470;DP=1495;FS=4.441;HRun=0;HaplotypeScore=270.1146;InbreedingCoeff=-1.0000;MQ=81.15;MQ0=0;MQRankSum=-3.607;QD=17.06;ReadPosRankSum=1.469;VQSLOD=4.3653;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:49,58:106:99:1924,0,1577	0/1:12,3:15:99:102,0,401	0/1:33,8:41:99:176,0,1141	0/1:32,9:41:99:239,0,956	0/1:27,22:50:99:704,0,886	0/1:22,20:42:99:789,0,742	0/1:29,20:49:99:645,0,964	0/1:25,19:44:99:664,0,825	0/1:29,24:53:99:869,0,951	0/1:27,26:53:99:884,0,925	0/1:19,15:34:99:575,0,619	0/1:46,32:78:99:1284,0,1604	0/1:39,24:63:99:866,0,1409	0/1:24,37:61:99:1502,0,691	0/1:30,23:53:99:938,0,972	0/1:32,22:54:99:765,0,1185	0/1:26,31:57:99:1223,0,831	0/1:36,30:66:99:1177,0,1179	0/1:20,17:37:99:659,0,516	0/1:21,25:46:99:1018,0,649	0/1:64,50:115:99:1924,0,2152	0/1:20,31:51:99:1096,0,641	0/1:21,15:36:99:521,0,724	0/1:36,32:68:99:1329,0,1249	0/1:24,17:41:99:646,0,808	0/1:27,31:58:99:1273,0,744	0/1:29,30:59:99:1211,0,1041	0/1:11,12:23:99:505,0,392
chr10	75764147	.	AC	A	6352.98	PASS	AB=0.993;AC=35;AF=0.625;AN=56;BaseQRankSum=25.667;DP=1261;FS=7.727;HRun=1;HaplotypeScore=178.2408;InbreedingCoeff=-0.5981;MQ=78.34;MQ0=0;MQRankSum=-1.666;QD=5.04;ReadPosRankSum=3.898;VQSLOD=1.6070;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:68,0:68:99:800,168,0	0/1:24,0:21:69.67:70,0,513	0/1:30,3:33:99:119,0,622	0/1:29,2:31:99:171,0,334	0/1:53,0:48:99:231,0,897	0/1:45,0:45:99:146,0,950	0/1:34,0:34:90.94:91,0,735	0/1:74,0:74:99:173,0,1480	1/1:42,0:42:99:546,110,0	0/1:46,0:45:80.98:81,0,934	0/1:46,0:39:87.46:87,0,867	1/1:53,0:53:99:718,145,0	1/1:44,0:44:69.20:509,69,0	0/1:41,0:41:68.83:69,0,1036	0/1:43,0:43:99:128,0,839	0/1:57,0:57:99:137,0,1473	0/1:36,0:36:99:174,0,680	0/1:39,0:39:99:192,0,532	0/1:49,0:49:99:138,0,939	0/1:67,0:58:99:191,0,1336	0/1:44,0:44:99:128,0,822	1/1:45,0:41:36.45:427,36,0	1/1:38,0:32:83.98:423,84,0	1/1:27,0:27:66.71:309,67,0	0/1:35,0:31:73.04:73,0,728	0/1:54,0:54:20.83:21,0,1442	0/1:66,0:66:99:181,0,1701	0/1:27,0:24:19.90:20,0,660
chr10	75765296	.	G	GGTCGGTCA	1867.10	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=2.071;DP=472;FS=2.315;HRun=0;HaplotypeScore=121.3682;InbreedingCoeff=0.8704;MQ=70.52;MQ0=0;MQRankSum=-6.172;QD=19.05;ReadPosRankSum=2.575;VQSLOD=2.6496;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:23.15:0,23,381	0/0:6,0:6:18.02:0,18,412	0/0:17,0:16:35.77:0,36,540	0/0:22,0:22:46.32:0,46,849	0/0:17,0:17:44.72:0,45,962	0/0:15,0:15:42.11:0,42,1069	0/0:26,0:26:75.16:0,75,1765	0/0:18,0:18:41.85:0,42,592	1/1:0,16:18:6.49:259,6,0	0/0:11,0:11:27.08:0,27,529	0/0:8,0:8:24.07:0,24,599	1/1:1,21:24:23.77:1030,24,0	1/1:1,15:17:6.43:259,6,0	0/0:16,0:16:39.06:0,39,860	0/0:16,0:16:38.89:0,39,639	0/0:21,0:21:63.18:0,63,1591	0/0:9,0:9:27:0,27,562	0/0:13,0:13:39.10:0,39,897	0/0:16,0:16:44.96:0,45,846	0/0:14,0:14:36.03:0,36,775	0/0:61,0:61:99:0,168,3507	1/1:0,11:15:6:240,6,0	1/1:1,9:11:6.02:221,6,0	1/1:1,12:13:2.94:18,3,0	0/0:11,0:11:27.09:0,27,701	0/0:17,0:17:51.02:0,51,1039	0/0:16,0:16:48.14:0,48,1180	0/0:12,0:12:32.93:0,33,651
chr10	75765413	.	T	TTGC	691.52	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.973;DP=613;FS=12.700;HRun=0;HaplotypeScore=88.7484;InbreedingCoeff=0.7428;MQ=63.98;MQ0=0;MQRankSum=-1.696;QD=24.70;ReadPosRankSum=-2.698;VQSLOD=1.8208;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,17:28:39.13:786,39,0	0/0:4,0:4:9.01:0,9,111	0/0:18,0:17:34.86:0,35,447	0/0:17,0:17:43.70:0,44,605	0/0:13,0:13:11.98:0,12,117	0/0:21,0:21:45.07:0,45,555	0/0:33,0:33:87.24:0,87,1183	0/0:29,0:29:60.16:0,60,798	0/0:26,0:26:72.20:0,72,984	0/0:15,0:15:20.67:0,21,198	0/0:11,0:11:27.03:0,27,351	0/0:27,0:27:66.12:0,66,839	0/0:22,0:22:57.10:0,57,741	0/0:31,0:31:87.19:0,87,1142	0/0:31,0:30:78.21:0,78,1054	0/0:33,0:33:81.20:0,81,1075	0/0:38,0:38:96.27:0,96,1316	0/0:21,0:21:54.09:0,54,697	0/0:20,0:20:30.08:0,30,387	0/0:9,0:9:5.97:0,6,66	0/0:56,0:55:99:0,114,1429	0/0:9,0:9:14.95:0,15,153	0/0:10,0:10:17.97:0,18,212	0/0:39,0:39:93.16:0,93,1223	0/0:11,0:11:18.04:0,18,224	0/0:20,0:20:27.04:0,27,305	0/0:18,0:17:39.13:0,39,564	0/0:3,0:3:6.02:0,6,87
chr10	75766426	.	G	GA	1260.09	PASS	AB=0.990;AC=15;AF=0.278;AN=54;BaseQRankSum=5.661;DP=486;FS=18.606;HRun=10;HaplotypeScore=102.9002;InbreedingCoeff=0.7003;MQ=49.41;MQ0=12;MQRankSum=-7.095;QD=8.24;ReadPosRankSum=-1.878;VQSLOD=0.3394;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:1.62:2,0,27	0/0:5,0:5:8.99:0,9,74	./.	0/0:28,0:8:11.97:0,12,48	0/0:22,1:22:9.51:0,10,284	0/0:15,0:14:26.88:0,27,218	0/0:15,0:15:14.89:0,15,123	0/0:23,0:22:7.11:0,7,258	1/1:3,10:12:24.49:238,24,0	0/0:13,0:13:17.91:0,18,148	0/1:19,0:18:2.47:2,0,178	1/1:7,10:16:38.76:331,39,0	1/1:6,8:12:26.95:251,27,0	0/0:17,0:16:11.86:0,12,98	0/0:12,0:12:8.87:0,9,74	0/0:22,0:23:24.65:0,25,183	0/1:33,1:34:7.30:7,0,258	0/0:20,0:17:14.93:0,15,207	0/0:18,0:18:29.89:0,30,246	0/0:23,0:22:7.13:0,7,174	0/0:10,0:8:8.97:0,9,71	1/1:6,12:18:28.23:266,28,0	1/1:6,4:11:20.52:172,21,0	1/1:5,7:9:17.98:171,18,0	0/0:17,0:16:16.12:0,16,143	0/0:16,0:16:32.92:0,33,269	0/0:20,0:21:6.73:0,7,159	0/0:16,0:16:35.31:0,35,281
chr10	75766460	.	AC	A	1657.29	PASS	AB=0.871;AC=16;AF=0.286;AN=56;BaseQRankSum=8.255;DP=589;FS=0.000;HRun=1;HaplotypeScore=91.3588;InbreedingCoeff=0.8072;MQ=57.82;MQ0=27;MQRankSum=-6.638;QD=11.59;ReadPosRankSum=0.463;VQSLOD=1.8248;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,5:14:28.49:206,28,0	0/0:5,0:4:8.96:0,9,83	0/0:57,0:8:5.86:0,6,36	0/0:57,1:19:12.75:0,13,150	0/0:27,0:26:25.90:0,26,474	0/0:18,0:18:44.17:0,44,353	0/0:15,0:15:20.30:0,20,294	0/1:21,0:28:11.74:12,0,416	1/1:5,5:12:28.53:257,29,0	0/0:14,0:13:33.56:0,34,400	0/0:18,0:18:45.72:0,46,512	1/1:2,10:13:37.65:370,38,0	1/1:8,5:13:32.49:301,32,0	0/0:15,0:15:30.22:0,30,354	0/0:10,0:10:13.90:0,14,189	0/0:15,0:15:40.05:0,40,344	0/0:35,0:35:49.73:0,50,826	0/0:24,1:22:9.26:0,9,221	0/1:22,0:22:3.26:3,0,328	0/0:30,0:29:34.85:0,35,647	0/0:7,0:6:13.85:0,14,147	1/1:4,6:11:28.82:277,29,0	1/1:6,4:11:21.73:221,22,0	1/1:2,5:9:20.91:208,21,0	0/0:27,0:26:61.31:0,61,618	0/0:22,0:22:18.36:0,18,463	0/0:22,0:23:36.30:0,36,340	0/0:22,0:22:56.07:0,56,585
chr10	75766461	.	CG	C	937.71	PASS	AB=0.970;AC=16;AF=0.286;AN=56;BaseQRankSum=9.800;DP=592;FS=2.435;HRun=1;HaplotypeScore=95.4962;InbreedingCoeff=0.7823;MQ=57.86;MQ0=27;MQRankSum=-6.149;QD=5.36;ReadPosRankSum=0.299;VQSLOD=0.5047;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:15:21.79:141,22,0	0/0:5,0:4:5.93:0,6,36	0/1:60,1:8:8.33:8,0,9	0/0:55,1:19:22.24:0,22,162	0/0:25,1:25:29.32:0,29,459	0/0:19,0:19:40.51:0,41,336	0/0:15,0:15:32.75:0,33,343	0/0:28,0:27:2.36:0,2,307	1/1:13,0:12:27.65:162,28,0	0/0:14,0:13:36.54:0,37,391	0/0:18,0:18:42.08:0,42,475	1/1:15,0:13:35.65:211,36,0	1/1:15,0:13:31.71:191,32,0	0/0:16,0:16:40.04:0,40,307	0/0:10,0:10:15.53:0,16,186	0/0:15,0:15:39.92:0,40,333	0/0:36,0:36:56.60:0,57,879	0/0:25,0:22:3.72:0,4,173	0/0:24,0:23:4.96:0,5,232	0/0:30,1:30:14.32:0,14,476	0/0:5,1:5:14.12:0,14,98	1/1:11,0:11:27.29:160,27,0	1/1:11,0:11:18.79:143,19,0	1/1:11,0:9:18.55:112,19,0	0/0:27,1:27:51.58:0,52,614	0/0:22,0:22:32.06:0,32,421	0/1:21,1:22:0.06:0,0,300	0/0:21,0:22:39.07:0,39,427
chr10	75766462	.	GA	G	186.95	PASS	AB=0.941;AC=13;AF=0.232;AN=56;BaseQRankSum=4.554;DP=605;FS=4.167;HRun=16;HaplotypeScore=101.4717;InbreedingCoeff=0.3679;MQ=60.18;MQ0=28;MQRankSum=-5.304;QD=1.11;ReadPosRankSum=2.374;VQSLOD=-0.3094;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:16:0.98:0,1,41	0/1:6,0:5:9.28:9,0,26	0/1:63,0:9:5.30:5,0,16	0/0:62,0:22:17.91:0,18,173	0/0:26,0:25:16.10:0,16,293	0/0:18,2:20:8.79:0,9,215	0/0:12,0:15:31.03:0,31,238	0/0:30,0:29:21.99:0,22,210	1/1:11,2:12:1.43:46,1,0	0/0:13,1:13:32.14:0,32,246	0/0:18,1:19:18.26:0,18,243	1/1:10,4:13:18.75:81,19,0	1/1:13,2:13:8.18:60,8,0	0/0:16,0:16:29.58:0,30,224	0/0:9,0:9:21.29:0,21,146	0/0:13,0:15:32.59:0,33,246	0/0:34,0:36:60.62:0,61,577	0/0:21,2:22:1.50:0,1,186	0/0:23,0:23:25.26:0,25,187	0/0:28,2:31:14.14:0,14,353	0/0:6,0:5:2.99:0,3,23	1/1:6,4:11:11.40:82,11,0	0/1:10,1:11:12.07:32,0,12	0/1:9,2:9:20.85:23,0,21	0/0:25,2:26:14.89:0,15,429	0/0:21,1:22:13.32:0,13,224	0/1:20,1:22:1.51:2,0,255	0/0:19,1:22:7.98:0,8,234
chr10	75767143	.	C	CA	2325.56	PASS	AB=0.971;AC=16;AF=0.286;AN=56;BaseQRankSum=-2.549;DP=562;FS=19.309;HRun=9;HaplotypeScore=67.3547;InbreedingCoeff=0.7986;MQ=58.38;MQ0=16;MQRankSum=-1.389;QD=12.92;ReadPosRankSum=0.691;VQSLOD=1.6254;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,14:27:23.52:443,24,0	0/0:6,0:6:15:0,15,130	0/1:40,0:13:7.44:7,0,53	0/0:40,0:10:10.95:0,11,83	0/0:37,0:38:74.96:0,75,651	0/0:19,0:19:37.01:0,37,345	0/0:17,0:17:35.98:0,36,312	0/0:26,1:23:17.79:0,18,383	1/1:2,10:12:21.06:232,21,0	0/0:20,1:21:11.78:0,12,321	0/0:16,0:16:32.95:0,33,279	1/1:2,24:26:54.15:597,54,0	1/1:6,5:11:18:179,18,0	0/0:15,0:15:29.94:0,30,260	0/0:23,0:23:50.92:0,51,442	0/0:20,1:21:17.76:0,18,380	0/0:30,0:31:64.83:0,65,552	0/0:26,1:27:23.73:0,24,428	0/0:10,0:10:23.99:0,24,206	0/0:19,0:19:44.76:0,45,390	0/0:13,0:12:26.99:0,27,234	1/1:3,10:13:1.01:229,1,0	1/1:5,13:18:33.09:362,33,0	1/1:2,13:16:42.11:462,42,0	0/0:13,0:13:26.96:0,27,228	0/1:15,1:15:3.21:3,0,204	0/0:21,0:21:53.87:0,54,459	0/0:5,0:5:15:0,15,130
chr10	75767165	.	G	GAA	748.29	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=3.439;DP=530;FS=5.514;HRun=11;HaplotypeScore=79.2416;InbreedingCoeff=0.7017;MQ=60.52;MQ0=3;MQRankSum=-3.014;QD=15.27;ReadPosRankSum=-1.764;VQSLOD=2.1731;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,16:31:69.11:843,69,0	0/0:7,0:7:18:0,18,174	0/0:15,0:6:8.56:0,9,62	0/1:15,0:7:2.04:2,0,36	0/0:32,0:32:77.65:0,78,735	0/0:19,0:19:47.38:0,47,444	0/0:16,0:16:39.02:0,39,378	0/0:25,0:27:49.78:0,50,582	0/0:14,0:14:19.85:0,20,226	0/0:27,0:29:56.40:0,56,584	0/0:18,0:19:38.57:0,39,414	0/0:27,0:28:47.95:0,48,460	0/0:10,0:11:23.75:0,24,210	0/0:12,0:13:26.63:0,27,230	0/0:17,0:18:40.96:0,41,405	0/0:19,0:20:44.62:0,45,460	0/0:28,0:28:65.44:0,65,595	0/0:23,0:23:47.70:0,48,462	0/0:16,0:15:39:0,39,369	0/0:23,0:23:60.07:0,60,576	0/0:10,0:11:20.30:0,20,221	0/0:13,0:14:23.75:0,24,267	0/0:11,0:11:27.02:0,27,255	0/0:17,0:17:39.03:0,39,378	0/0:10,0:10:23.97:0,24,227	0/0:23,0:25:44.58:0,45,405	0/0:25,0:25:39.37:0,39,537	0/0:10,0:10:30.05:0,30,291
chr10	75767265	.	GGTGTGTGTGTGTGTGTGTGTGTGT	G	2648.73	PASS	AB=0.765;AC=11;AF=0.196;AN=56;BaseQRankSum=5.948;DP=560;FS=5.257;HRun=0;HaplotypeScore=290.7329;InbreedingCoeff=0.8026;MQ=65.96;MQ0=13;MQRankSum=-4.559;QD=24.30;ReadPosRankSum=4.021;VQSLOD=1.7851;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:40:24.97:0,25,893	0/0:10,0:10:15.05:0,15,1013	0/0:31,0:10:3.01:0,3,39	0/0:41,0:19:15.05:0,15,512	0/0:22,0:21:18.06:0,18,1232	0/0:13,0:15:27.09:0,27,2411	0/0:22,0:22:39.13:0,39,3162	0/0:21,0:21:33.11:0,33,1612	1/1:13,7:20:18.06:1129,18,0	0/0:19,0:19:27.09:0,27,2066	0/0:12,0:12:12.04:0,12,1213	1/1:17,7:24:15.05:941,15,0	1/1:12,0:12:9.02:167,9,0	0/0:12,0:13:12.02:0,12,635	0/0:21,0:22:39.13:0,39,2960	0/0:19,0:21:27.08:0,27,1895	0/0:19,0:21:25.90:0,26,2276	0/0:23,0:24:49.98:0,50,3958	0/0:9,0:8:9.03:0,9,579	0/0:20,0:21:27.56:0,28,2247	0/0:26,0:29:43.03:0,43,3082	0/1:9,4:13:0:0,0,0	1/1:14,4:18:2.67:188,3,0	1/1:15,6:21:6.02:376,6,0	0/0:16,0:16:21.06:0,21,1529	0/0:15,0:14:15.05:0,15,1043	0/0:14,0:14:30.10:0,30,2469	0/0:11,0:11:21.07:0,21,1444
chr10	75769741	.	C	CTCTGTCTG	3516.92	PASS	AB=0.679;AC=13;AF=0.232;AN=56;BaseQRankSum=-3.002;DP=786;FS=1.429;HRun=0;HaplotypeScore=200.3284;InbreedingCoeff=0.8895;MQ=64.02;MQ0=2;MQRankSum=-6.304;QD=18.51;ReadPosRankSum=-0.655;VQSLOD=3.0173;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,13:39:9.03:341,9,0	0/0:16,0:16:33.11:0,33,729	0/0:19,0:16:12.04:0,12,228	0/0:18,0:11:11.57:0,12,151	0/0:23,0:23:30.09:0,30,601	0/0:31,0:31:32.53:0,33,1204	0/0:48,0:48:72.21:0,72,1592	0/0:45,0:45:43.91:0,44,710	1/1:14,11:25:14.88:600,15,0	0/0:27,0:27:33.10:0,33,632	0/0:14,0:14:33.11:0,33,740	1/1:8,18:27:18.06:740,18,0	1/1:16,13:35:27.09:1099,27,0	0/0:29,0:29:63.19:0,63,1389	0/0:38,0:38:84.27:0,84,2009	0/0:50,0:50:96.28:0,96,2091	0/0:27,0:27:54.18:0,54,1256	0/0:16,0:16:21.07:0,21,470	0/0:16,0:16:6.02:0,6,146	0/0:30,0:30:66.18:0,66,1431	0/0:49,0:48:99:0,102,2208	1/1:12,5:25:5.53:216,6,0	0/1:10,9:19:0.31:0,0,1	1/1:18,0:20:24.05:521,24,0	0/0:12,0:12:18.06:0,18,455	0/0:30,0:30:66.16:0,66,1505	0/0:39,0:39:81.22:0,81,1850	0/0:19,0:19:42.11:0,42,832
chr10	75773455	.	ATT	A	2074.94	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.937;DP=464;FS=3.039;HRun=10;HaplotypeScore=58.4489;InbreedingCoeff=0.9561;MQ=68.51;MQ0=7;MQRankSum=1.105;QD=20.34;ReadPosRankSum=2.384;VQSLOD=2.6294;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:25:51.13:568,51,0	0/0:10,0:10:27.09:0,27,424	0/0:16,0:13:7.41:0,7,105	0/0:11,0:8:8.19:0,8,87	0/0:22,0:24:68.21:0,68,1015	0/0:14,0:14:39.12:0,39,597	0/0:9,0:8:15.05:0,15,238	0/0:23,0:23:54.18:0,54,843	1/1:4,9:13:24.05:268,24,0	0/0:20,0:21:59.69:0,60,913	0/0:26,0:26:69.02:0,69,1054	1/1:2,15:17:35.99:400,36,0	1/1:4,6:8:12.03:134,12,0	0/0:15,0:14:36.09:0,36,507	0/0:15,0:15:36.12:0,36,571	0/0:28,0:28:75.25:0,75,1157	0/0:20,0:19:51.15:0,51,749	0/0:13,0:11:15.02:0,15,204	0/0:16,0:15:36.06:0,36,519	0/0:8,0:8:21.07:0,21,333	0/0:5,0:5:15.05:0,15,238	1/1:2,12:14:30.07:333,30,0	1/1:2,12:13:33.09:367,33,0	1/1:1,6:7:18.04:201,18,0	0/0:22,0:24:63.20:0,63,957	0/0:20,0:21:63.15:0,63,920	0/0:23,0:23:60.18:0,60,899	0/0:19,0:19:48.16:0,48,756
chr10	75775225	.	AGT	A	491.02	PASS	AB=0.949;AC=20;AF=0.370;AN=54;BaseQRankSum=3.628;DP=549;FS=12.658;HRun=0;HaplotypeScore=81.1595;InbreedingCoeff=-0.3210;MQ=57.08;MQ0=21;MQRankSum=0.211;QD=1.36;ReadPosRankSum=0.299;VQSLOD=0.7405;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:0.07:0,0,1	0/0:5,0:5:6.02:0,6,89	0/0:28,0:16:3.01:0,3,41	./.	0/1:17,3:20:11.28:11,0,323	0/1:23,0:22:78.21:78,0,223	0/1:20,0:19:59.05:59,0,153	0/0:23,0:23:6.02:0,6,83	1/1:16,0:13:2.79:13,3,0	0/1:20,1:22:62.15:62,0,108	0/1:20,0:20:10.42:10,0,221	0/1:14,0:14:7.74:8,0,14	1/1:13,0:12:1.85:5,2,0	0/1:15,3:18:45.27:45,0,160	0/1:22,3:25:6.08:6,0,324	0/0:13,0:19:18:0,18,174	0/1:17,0:15:1.55:2,0,344	0/1:29,1:29:99:122,0,327	0/1:17,0:15:38.68:39,0,100	0/1:9,1:10:22.31:22,0,81	0/1:27,1:27:48.23:48,0,181	0/0:12,0:12:2.60:0,3,10	0/0:19,0:19:3.47:0,3,26	0/1:25,0:22:0:0,0,0	0/1:13,2:14:18.12:18,0,146	0/1:27,0:26:79.34:79,0,237	0/0:19,1:19:24.08:0,24,345	0/0:12,0:10:13.29:0,13,180
chr10	75775247	.	TGTGTGTGTGTGTGTGTGC	T	973.23	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=2.990;DP=586;FS=10.513;HRun=0;HaplotypeScore=217.4756;InbreedingCoeff=0.8269;MQ=51.61;MQ0=28;MQRankSum=1.610;QD=8.46;ReadPosRankSum=-1.337;VQSLOD=1.3551;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:16:10.28:0,10,53	0/0:8,0:8:18.43:0,18,771	./.	./.	0/0:26,0:25:48.16:0,48,2898	0/0:28,0:25:28.97:0,29,2848	0/0:20,0:19:36.39:0,36,1823	0/0:24,0:23:39.01:0,39,891	1/1:28,0:25:6.02:217,6,0	0/0:27,0:26:50.62:0,51,2535	0/0:19,0:19:36.11:0,36,1918	1/1:19,0:18:20.99:350,21,0	1/1:15,0:14:5.25:215,5,0	0/0:23,0:23:36.07:0,36,2132	0/0:29,0:29:38.80:0,39,2342	0/0:23,0:22:24.29:0,24,1517	0/0:24,0:21:47.99:0,48,2252	0/0:36,0:35:80.36:0,80,4467	0/0:18,0:14:6.99:0,7,1146	0/0:7,0:7:15.05:0,15,955	0/0:41,0:37:36.26:0,36,2300	1/1:13,0:13:11.12:117,11,0	1/1:7,13:20:2.51:115,3,0	1/1:6,14:17:3.01:115,3,0	0/0:20,0:19:27.07:0,27,1554	0/0:26,0:25:41.29:0,41,2027	0/0:14,0:13:26.68:0,27,1597	0/0:14,0:11:27.09:0,27,1322
chr10	75775261	.	TGTGC	T	811.23	PASS	AB=1.000;AC=22;AF=0.423;AN=52;BaseQRankSum=7.607;DP=536;FS=8.059;HRun=0;HaplotypeScore=100.5424;InbreedingCoeff=0.0614;MQ=50.10;MQ0=28;MQRankSum=-0.220;QD=2.28;ReadPosRankSum=-5.563;VQSLOD=-0.7316;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:23:43.04:94,0,43	0/1:9,0:9:2.69:3,0,175	./.	./.	0/0:25,0:25:20.43:0,20,544	0/1:27,0:24:22.97:23,0,478	0/1:21,0:20:5.16:5,0,351	0/0:18,0:16:16.04:0,16,140	1/1:5,19:21:6.01:61,6,0	0/0:25,0:24:7.64:0,8,358	0/1:15,0:15:5.05:5,0,374	1/1:24,0:23:35.95:305,36,0	1/1:15,0:14:30.19:225,30,0	0/1:22,0:22:13.42:13,0,406	0/0:22,0:22:23.14:0,23,514	0/0:21,0:20:21.29:0,21,345	0/1:22,0:19:41.69:42,0,490	0/1:35,0:34:61.51:62,0,721	0/0:16,0:13:9.73:0,10,203	0/1:7,0:7:4.86:5,0,183	0/1:40,0:35:29.48:29,0,367	0/1:12,0:12:5.48:63,0,5	1/1:17,0:17:2.78:17,3,0	1/1:18,0:15:2.92:17,3,0	0/0:20,0:19:10.11:0,10,359	0/1:23,0:22:2.75:3,0,367	0/0:11,0:10:29.51:0,30,475	0/0:14,0:11:14.54:0,15,340
chr10	75775618	.	G	GTTT	3459.41	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-6.070;DP=569;FS=0.477;HRun=9;HaplotypeScore=84.3373;InbreedingCoeff=0.8819;MQ=72.09;MQ0=1;MQRankSum=-2.322;QD=32.03;ReadPosRankSum=-1.148;VQSLOD=2.5551;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.14:0,78,928	0/0:8,0:8:20.73:0,21,265	0/0:19,0:14:0.13:0,0,98	0/1:13,0:11:3.28:3,0,109	0/0:34,0:34:92.46:0,92,1130	0/0:25,0:25:60.15:0,60,757	0/0:19,0:19:52.68:0,53,652	0/0:28,0:28:52.06:0,52,700	1/1:3,8:12:27.09:516,27,0	0/0:35,0:35:87.21:0,87,1089	0/0:22,0:22:50.14:0,50,676	1/1:4,16:22:45.13:835,45,0	1/1:4,13:17:36.12:710,36,0	0/0:19,0:19:51.16:0,51,638	0/0:16,0:16:48.15:0,48,606	0/0:14,0:15:37.68:0,38,477	0/0:28,0:28:66.15:0,66,834	0/0:14,0:14:36.10:0,36,455	0/0:26,0:26:66.15:0,66,809	0/0:15,0:15:42.12:0,42,531	0/0:25,0:25:60.08:0,60,699	1/1:2,11:14:32.96:477,33,0	1/1:4,9:14:25.57:402,26,0	1/1:4,11:15:27.09:516,27,0	0/0:15,0:16:34.67:0,35,452	0/0:18,0:18:51.15:0,51,634	0/0:37,0:36:93.17:0,93,1140	0/0:14,0:14:36.10:0,36,455
chr10	75777443	.	CGTGTGTGTGTGTGTGTGT	C	61.45	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.625;DP=563;FS=2.591;HRun=0;HaplotypeScore=226.1879;InbreedingCoeff=0.3827;MQ=53.77;MQ0=24;MQRankSum=-3.201;QD=1.66;ReadPosRankSum=-1.203;VQSLOD=2.3593;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,13:37:3.01:138,3,0	0/0:4,0:4:6.02:0,6,229	0/0:32,0:14:6.02:0,6,273	0/0:31,0:15:18.06:0,18,643	0/0:25,0:25:19.84:0,20,1367	0/0:28,0:28:46.91:0,47,2631	0/0:28,0:24:39.24:0,39,1752	0/0:25,0:24:33.11:0,33,1505	0/0:9,0:9:3.43:0,3,72	0/0:19,0:18:27.09:0,27,1749	0/0:21,0:21:18.53:0,19,1056	0/0:15,0:15:11.12:0,11,814	0/0:12,0:11:5.03:0,5,809	0/0:24,0:23:42.62:0,43,2761	0/0:27,0:26:30.99:0,31,1971	0/0:16,0:16:33.11:0,33,2178	0/0:34,0:34:81.72:0,82,4974	0/0:18,0:17:36.05:0,36,1805	0/0:23,0:21:30.10:0,30,1724	0/0:13,0:13:10.27:0,10,655	0/0:29,0:28:54.19:0,54,3265	0/0:2,0:2:0:0,0,0	0/0:6,0:6:3.01:0,3,101	0/0:24,0:22:21.07:0,21,1577	0/0:18,0:17:12.04:0,12,680	0/0:18,0:16:33.11:0,33,1990	0/0:19,0:19:37.84:0,38,2111	0/0:6,0:6:3.01:0,3,138
chr10	75777669	.	C	CT	2263.58	PASS	AB=0.657;AC=12;AF=0.214;AN=56;BaseQRankSum=-5.138;DP=470;FS=9.324;HRun=9;HaplotypeScore=49.3817;InbreedingCoeff=0.7895;MQ=65.78;MQ0=0;MQRankSum=1.536;QD=21.15;ReadPosRankSum=2.365;VQSLOD=4.0660;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,37:45:76.19:1057,76,0	0/0:5,0:5:12:0,12,104	0/0:8,0:8:8.98:0,9,75	0/0:6,0:5:5.96:0,6,46	0/0:16,0:16:35.93:0,36,302	0/0:28,0:28:45.46:0,45,541	0/0:12,0:12:26.94:0,27,225	0/0:31,0:31:77.91:0,78,669	1/1:5,16:21:38.90:430,39,0	0/0:24,0:24:56.97:0,57,492	0/0:13,0:13:32.99:0,33,286	1/1:2,8:10:21.06:232,21,0	1/1:1,9:10:27.07:298,27,0	0/0:13,0:13:26.93:0,27,224	0/0:22,0:22:50.96:0,51,439	0/0:14,0:14:20.97:0,21,180	0/0:28,0:28:65.83:0,66,552	0/0:14,0:13:29.98:0,30,260	0/0:21,0:21:39.27:0,39,474	0/0:13,0:13:35.99:0,36,313	0/0:15,0:15:32.99:0,33,286	0/1:2,2:4:17.03:57,0,17	1/1:0,6:6:15.51:167,16,0	0/1:5,6:11:2:200,0,2	0/0:18,0:18:47.97:0,48,412	0/0:24,1:25:26.77:0,27,454	0/0:32,0:32:68.82:0,69,585	0/0:5,0:5:12:0,12,104
chr10	75777753	.	C	CT	11305.33	PASS	AC=52;AF=1.000;AN=52;DP=401;FS=0.000;HRun=4;HaplotypeScore=48.7261;InbreedingCoeff=-0.0071;MQ=35.20;MQ0=11;QD=29.21;VQSLOD=4.2153;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,12:17:21.07:287,21,0	1/1:1,6:7:18.06:246,18,0	./.	./.	1/1:3,25:28:54.09:695,54,0	1/1:0,15:15:33.11:451,33,0	1/1:3,14:17:36.12:491,36,0	1/1:8,27:32:87.29:1183,87,0	1/1:1,14:15:42.11:550,42,0	1/1:3,9:12:33.11:451,33,0	1/1:0,25:24:56.87:757,57,0	1/1:0,11:11:27.05:347,27,0	1/1:2,14:15:36.12:491,36,0	1/1:0,18:17:42.14:573,42,0	1/1:2,15:17:42.14:573,42,0	1/1:2,20:21:42.14:573,42,0	1/1:2,12:14:27.09:369,27,0	1/1:2,3:3:9.02:111,9,0	1/1:3,10:12:33.09:430,33,0	1/1:0,10:9:21.03:266,21,0	1/1:0,3:3:8.99:102,9,0	1/1:1,5:6:12.03:149,12,0	1/1:3,7:10:18.40:182,18,0	1/1:1,8:9:18.06:246,18,0	1/1:0,17:16:33.11:451,33,0	1/1:2,17:18:51.13:676,51,0	1/1:1,16:15:30.09:410,30,0	1/1:0,8:8:18.06:246,18,0
chr10	75778120	.	TA	T	1768.77	PASS	AB=0.700;AC=11;AF=0.196;AN=56;BaseQRankSum=8.107;DP=512;FS=2.920;HRun=8;HaplotypeScore=54.1939;InbreedingCoeff=0.8837;MQ=67.46;MQ0=0;MQRankSum=0.498;QD=20.57;ReadPosRankSum=2.630;VQSLOD=3.7723;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.22:0,72,862	0/0:15,0:15:45.07:0,45,504	0/0:9,0:8:21.61:0,22,191	0/0:9,0:9:16.46:0,16,156	0/0:29,0:29:63.18:0,63,749	0/0:15,0:15:42.13:0,42,507	0/0:10,0:10:30.08:0,30,352	0/0:33,0:33:93.26:0,93,1093	1/1:0,13:13:36.06:348,36,0	0/0:20,0:20:48.12:0,48,551	0/0:20,0:20:51.16:0,51,616	1/1:1,21:22:60.10:579,60,0	1/1:4,14:18:42.06:405,42,0	0/0:14,0:14:39.10:0,39,458	0/0:19,0:19:45.11:0,45,521	0/0:17,0:17:48.15:0,48,577	0/0:15,0:15:45.14:0,45,544	0/0:29,0:29:81.12:0,81,909	0/0:27,0:27:57.70:0,58,618	0/0:14,0:14:36.10:0,36,425	0/0:11,0:11:30.09:0,30,362	1/1:2,10:12:26.99:251,27,0	1/1:0,14:14:30.04:289,30,0	0/1:4,3:7:23.17:75,0,23	0/0:25,0:25:66.18:0,66,778	0/0:24,0:24:63.15:0,63,744	0/0:22,0:22:57.15:0,57,665	0/0:23,0:23:60.18:0,60,725
chr10	75778490	.	CT	C	1887.62	PASS	AB=0.804;AC=14;AF=0.250;AN=56;BaseQRankSum=11.258;DP=494;FS=1.992;HRun=10;HaplotypeScore=75.1559;InbreedingCoeff=0.8578;MQ=75.62;MQ0=0;MQRankSum=-6.027;QD=16.85;ReadPosRankSum=-0.038;VQSLOD=4.0842;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:24:62.90:534,63,0	0/0:11,0:11:27.07:0,27,299	0/0:27,0:21:42.55:0,43,304	0/1:19,0:15:0.93:1,0,142	0/0:40,0:40:99:0,111,1201	0/0:15,0:15:45.11:0,45,491	0/0:12,0:12:30.08:0,30,332	0/0:33,0:33:69.18:0,69,756	0/1:5,9:14:0.19:225,0,0	0/0:24,0:24:69.19:0,69,760	0/0:26,0:26:75.20:0,75,824	1/1:0,8:8:24:208,24,0	1/1:2,12:14:38.98:337,39,0	0/0:13,0:13:38.75:0,39,399	0/0:15,0:15:42.04:0,42,435	0/0:21,0:21:54.10:0,54,576	0/0:20,0:20:48.02:0,48,531	0/0:13,0:13:36.10:0,36,398	0/0:20,0:20:40.35:0,40,434	0/0:15,0:15:42.11:0,42,463	0/0:3,0:3:3.01:0,3,33	1/1:1,4:5:14.46:107,14,0	1/1:1,20:21:62.67:531,63,0	1/1:0,7:7:15:130,15,0	0/0:21,0:21:59.35:0,59,622	0/0:22,0:22:57.15:0,57,623	0/0:13,1:14:13.04:0,13,355	0/0:17,0:17:51.13:0,51,556
chr10	75778518	.	G	GTT	1491.20	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=7.804;DP=458;FS=2.512;HRun=11;HaplotypeScore=80.2060;InbreedingCoeff=0.8029;MQ=64.50;MQ0=2;MQRankSum=-6.841;QD=18.41;ReadPosRankSum=-0.121;VQSLOD=2.8069;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:23:46.30:0,46,211	0/0:9,0:9:23.97:0,24,220	0/1:14,0:9:12.11:12,0,70	0/0:10,0:6:0.99:0,1,58	0/0:30,0:35:88.54:0,89,816	0/0:16,0:16:45.06:0,45,435	0/0:13,0:13:29.98:0,30,284	0/0:32,0:30:48.51:0,49,422	1/1:7,5:13:31.10:348,31,0	0/0:25,0:26:58.22:0,58,587	0/0:25,0:25:57.87:0,58,549	1/1:5,2:7:8.90:130,9,0	1/1:7,8:16:29.93:365,30,0	0/0:14,0:14:41.04:0,41,339	0/0:12,0:12:32.78:0,33,302	0/0:22,0:22:44.93:0,45,478	0/0:24,0:24:63.82:0,64,574	0/0:13,0:13:32.92:0,33,313	0/0:14,0:14:32.67:0,33,301	0/0:14,0:14:31.77:0,32,270	0/0:2,0:2:3:0,3,29	1/1:2,3:5:12.51:174,13,0	1/1:12,8:21:42.55:515,43,0	1/1:3,2:5:9.03:128,9,0	0/0:18,0:19:41.55:0,42,356	0/0:21,0:25:34.49:0,34,438	0/0:10,0:10:20.73:0,21,186	0/0:16,0:17:37.73:0,38,393
chr10	75778901	.	TCAGACACAC	T	5394.53	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.874;DP=606;FS=15.508;HRun=0;HaplotypeScore=148.2468;InbreedingCoeff=0.9473;MQ=49.35;MQ0=31;MQRankSum=-12.074;QD=46.11;ReadPosRankSum=0.271;VQSLOD=3.8838;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:81.19:0,81,3471	0/0:15,0:15:42.14:0,42,2013	0/0:10,0:1:3.01:0,3,142	0/0:20,0:3:9.01:0,9,268	0/0:31,0:30:75.26:0,75,3447	0/0:24,0:23:57.20:0,57,2625	0/0:19,0:18:45.15:0,45,2135	0/0:29,0:28:81.26:0,81,3466	1/1:1,17:18:42.06:1131,42,0	0/0:27,0:25:72.25:0,72,3372	0/0:30,0:30:78.27:0,78,3686	1/1:4,20:22:45.11:1289,45,0	1/1:0,21:21:54.10:1354,54,0	0/0:16,0:16:42.14:0,42,2015	0/0:20,0:19:48.16:0,48,2246	0/0:19,0:19:57.20:0,57,2698	0/0:15,0:15:27.09:0,27,1294	0/0:26,0:25:57.20:0,57,2721	0/0:21,0:18:54.19:0,54,2557	0/0:24,0:23:66.23:0,66,3057	0/0:31,0:23:45.14:0,45,2053	1/1:2,21:20:35.91:683,36,0	1/1:3,18:19:32.86:645,33,0	1/1:3,7:8:12:293,12,0	0/0:21,0:21:57.18:0,57,2672	0/0:17,0:17:48.16:0,48,2168	0/0:29,0:28:78.74:0,79,3574	0/0:10,0:10:30.10:0,30,1409
chr10	75781283	.	T	TTC	947.77	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=2.322;DP=601;FS=0.615;HRun=0;HaplotypeScore=97.5457;InbreedingCoeff=0.8661;MQ=45.46;MQ0=50;MQRankSum=0.156;QD=8.03;ReadPosRankSum=2.181;VQSLOD=2.9913;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:11:25.73:0,26,153	0/0:6,0:5:14.89:0,15,152	0/0:36,0:6:5.58:0,6,46	0/1:36,0:7:5.73:6,0,25	0/0:28,0:26:56.93:0,57,561	0/0:18,0:17:45.05:0,45,470	0/0:19,0:17:43.94:0,44,426	0/0:29,0:23:46.82:0,47,478	1/1:4,10:14:18.05:236,18,0	0/0:30,0:29:62.54:0,63,777	0/0:21,0:19:50.08:0,50,481	1/1:13,1:14:15.24:144,15,0	1/1:7,7:13:20.89:242,21,0	0/0:17,0:15:29.25:0,29,241	0/0:17,0:17:35.88:0,36,364	0/0:15,0:14:29.76:0,30,311	0/0:28,0:26:61.68:0,62,576	0/0:29,0:26:53.23:0,53,514	0/0:24,0:18:31.06:0,31,399	0/0:17,0:16:36.31:0,36,372	0/0:13,0:12:23.90:0,24,240	1/1:2,9:11:25.31:240,25,0	1/1:5,10:16:18.54:178,19,0	1/1:1,5:8:5.88:84,6,0	0/0:24,0:24:54.35:0,54,663	0/0:38,0:35:98.24:0,98,926	0/0:34,0:34:90.39:0,90,909	0/0:23,0:19:45.05:0,45,531
chr10	75781284	.	T	TC	400.84	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=4.764;DP=598;FS=0.654;HRun=0;HaplotypeScore=92.6140;InbreedingCoeff=0.8173;MQ=45.33;MQ0=51;MQRankSum=-0.537;QD=3.40;ReadPosRankSum=2.638;VQSLOD=2.8370;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:11:27.86:0,28,161	0/0:6,0:5:12.46:0,12,126	0/0:35,0:6:4.93:0,5,29	0/1:34,0:7:3.18:3,0,17	0/0:28,0:26:49.62:0,50,476	0/0:18,0:17:45:0,45,445	0/0:17,0:15:44.75:0,45,418	0/0:29,0:23:60.44:0,60,513	1/1:17,1:16:17.27:104,17,0	0/0:30,0:29:75.94:0,76,747	0/0:20,0:18:46.82:0,47,446	1/1:5,9:15:0.78:62,1,0	1/1:15,1:13:19.52:128,20,0	0/0:17,0:15:29.31:0,29,234	0/0:16,0:16:31.49:0,31,293	0/0:15,0:14:28.34:0,28,241	0/0:27,0:25:65.37:0,65,574	0/0:29,0:26:54.52:0,55,508	0/0:27,0:20:50.85:0,51,427	0/0:17,0:16:33.37:0,33,336	0/0:13,0:12:23.96:0,24,231	1/1:11,0:11:11.94:118,12,0	1/1:16,1:16:19.10:120,19,0	1/1:7,0:7:5.55:36,6,0	0/0:24,0:24:62.91:0,63,647	0/0:38,0:35:99:0,102,918	0/0:34,0:34:91.69:0,92,834	0/0:23,0:19:43.81:0,44,459
chr10	75781896	.	G	GTT	3761.02	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=4.337;DP=664;FS=11.305;HRun=11;HaplotypeScore=92.4832;InbreedingCoeff=0.9380;MQ=72.31;MQ0=0;MQRankSum=-0.842;QD=24.91;ReadPosRankSum=1.005;VQSLOD=2.3668;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,34:40:77.72:1055,78,0	0/0:5,0:7:11.67:0,12,141	0/0:12,0:13:1.94:0,2,131	0/0:10,0:10:6.03:0,6,55	0/0:24,0:25:53.68:0,54,495	0/0:23,0:24:53.71:0,54,497	0/0:24,0:25:53.73:0,54,495	0/0:36,0:37:65.51:0,66,663	1/1:2,9:12:18.06:261,18,0	0/0:29,0:32:65.34:0,65,589	0/0:20,0:20:54.06:0,54,517	1/1:4,18:24:39.12:535,39,0	1/1:1,16:20:32.41:428,32,0	0/0:19,0:19:47.95:0,48,450	0/0:20,0:20:41.32:0,41,436	0/0:20,0:20:51.06:0,51,495	0/0:33,0:33:79.30:0,79,762	0/0:20,0:20:45.01:0,45,430	0/0:24,0:26:59.53:0,60,547	0/0:18,0:20:44.72:0,45,419	0/0:43,0:44:90.80:0,91,1005	1/1:3,13:17:32.93:383,33,0	1/1:4,16:20:36.13:462,36,0	1/1:1,16:18:45.15:637,45,0	0/0:33,0:34:71.85:0,72,693	0/0:35,0:37:83.48:0,83,768	0/0:30,0:31:68.67:0,69,645	0/0:12,0:13:38.78:0,39,354
chr10	75782366	.	C	CACACACACAT	2684.14	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=8.152;DP=663;FS=7.742;HRun=0;HaplotypeScore=222.3454;InbreedingCoeff=0.7878;MQ=52.22;MQ0=10;MQRankSum=-2.858;QD=13.63;ReadPosRankSum=-1.787;VQSLOD=1.0949;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:39:35.52:91,0,36	0/0:8,0:8:21.02:0,21,323	0/0:8,0:1:2.92:0,3,17	0/0:10,0:3:2.92:0,3,17	0/0:21,0:21:36.04:0,36,745	0/0:15,0:15:33.03:0,33,666	0/0:39,0:39:73.49:0,73,1499	0/0:19,0:18:16.38:0,16,245	1/1:19,5:23:26.94:453,27,0	0/0:19,0:19:34.55:0,35,626	0/0:18,0:18:36.03:0,36,527	1/1:33,7:40:47.38:984,47,0	1/1:14,3:17:24.08:692,24,0	0/0:30,0:30:66.04:0,66,1433	0/0:15,0:15:36.07:0,36,819	0/0:16,0:16:39.08:0,39,1041	0/0:34,0:34:89.94:0,90,2153	0/0:39,0:38:28.15:0,28,1815	0/0:22,0:20:50.83:0,51,754	0/0:17,0:16:30.02:0,30,549	0/0:62,0:59:99:0,119,1712	1/1:15,5:20:2.95:19,3,0	1/1:20,1:21:9.47:116,9,0	1/1:29,5:34:23.38:508,23,0	0/0:23,0:23:48.05:0,48,938	0/0:20,0:20:29.91:0,30,752	0/0:19,0:19:40.83:0,41,774	0/0:11,0:11:24.02:0,24,509
chr10	75782389	.	G	GCA	2042.20	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=5.600;DP=559;FS=0.569;HRun=0;HaplotypeScore=99.5237;InbreedingCoeff=0.8433;MQ=62.23;MQ0=2;MQRankSum=-1.593;QD=12.53;ReadPosRankSum=2.832;VQSLOD=3.5207;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,31:35:33.11:555,33,0	0/0:7,0:7:20.97:0,21,230	0/0:10,0:6:2.67:0,3,85	0/1:12,0:10:5.42:5,0,13	0/0:19,0:19:49.17:0,49,525	0/0:14,0:14:36.02:0,36,420	0/0:27,0:27:72.07:0,72,871	0/0:21,0:21:56.97:0,57,565	1/1:4,12:16:27.02:445,27,0	0/0:20,0:20:48:0,48,533	0/0:17,0:17:45.02:0,45,530	1/1:5,21:27:33.04:517,33,0	1/1:3,10:14:9.03:158,9,0	0/0:22,0:22:57.03:0,57,672	0/0:13,0:13:35.95:0,36,385	0/0:14,0:14:36.02:0,36,438	0/0:31,0:31:90.12:0,90,1108	0/0:35,0:34:89.97:0,90,1043	0/0:22,0:22:47.67:0,48,481	0/0:15,0:15:42.07:0,42,514	0/0:48,0:47:99:0,123,1365	1/1:4,12:17:9.03:153,9,0	1/1:2,14:16:2.77:54,3,0	1/1:3,23:26:20.69:342,21,0	0/0:15,0:15:39.07:0,39,487	0/0:22,0:22:57:0,57,647	0/0:11,0:11:24.76:0,25,306	0/0:13,0:13:36.06:0,36,460
chr10	75782713	.	TTG	T	785.25	PASS	AB=0.935;AC=11;AF=0.196;AN=56;BaseQRankSum=8.339;DP=604;FS=0.589;HRun=0;HaplotypeScore=71.2850;InbreedingCoeff=0.3581;MQ=63.63;MQ0=4;MQRankSum=0.185;QD=4.59;ReadPosRankSum=0.950;VQSLOD=2.4367;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,14:28:35.79:394,36,0	0/0:10,0:10:30.10:0,30,458	0/0:16,0:8:3.01:0,3,40	0/0:16,0:12:8.91:0,9,75	0/0:32,3:35:26.20:0,26,1026	0/0:32,1:33:47.04:0,47,1115	0/0:30,3:33:35.04:0,35,970	0/1:29,2:31:23.33:23,0,403	1/1:0,11:12:21.01:224,21,0	0/0:26,0:26:45.12:0,45,727	0/0:20,0:20:53.74:0,54,784	0/0:17,0:17:36.12:0,36,550	0/0:19,0:18:48.16:0,48,729	0/1:19,2:21:20.23:20,0,551	0/0:16,1:19:16.97:0,17,685	0/0:21,1:22:16.99:0,17,698	0/0:17,0:17:36.11:0,36,529	1/1:4,11:15:20.89:219,21,0	0/0:18,0:17:15.05:0,15,213	0/0:31,0:31:57.18:0,57,844	0/1:19,1:21:20.33:20,0,534	0/0:18,1:18:1.88:0,2,443	0/0:21,1:22:25.09:0,25,590	0/1:19,1:20:20.04:20,0,420	0/0:16,0:16:33.11:0,33,502	0/0:28,1:29:7.04:0,7,727	0/1:19,2:21:26.27:26,0,475	0/0:15,0:15:36.12:0,36,547
chr10	75783989	.	G	GA	2999.11	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-7.560;DP=669;FS=13.555;HRun=10;HaplotypeScore=72.1919;InbreedingCoeff=0.8931;MQ=74.96;MQ0=4;MQRankSum=-0.186;QD=17.44;ReadPosRankSum=0.911;VQSLOD=3.2860;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:31:47.54:711,48,0	0/0:15,0:15:42.40:0,42,342	0/0:44,0:27:23.59:0,24,167	0/1:31,0:21:27.68:28,0,99	0/0:30,0:30:55.20:0,55,597	0/0:28,0:28:38.05:0,38,467	0/0:22,0:22:62.91:0,63,517	0/0:20,0:20:36.40:0,36,314	1/1:4,18:22:41.90:429,42,0	0/0:29,0:29:71.88:0,72,591	0/0:19,0:19:56.92:0,57,465	1/1:1,17:18:42.11:448,42,0	1/1:6,17:23:48.12:512,48,0	0/0:14,1:15:6.93:0,7,259	0/0:38,0:38:85.13:0,85,753	0/0:22,0:23:24.19:0,24,393	0/0:26,0:27:55.95:0,56,449	0/0:15,0:15:33.17:0,33,290	0/0:19,0:19:50.90:0,51,414	0/0:26,0:27:67.86:0,68,548	0/0:17,0:17:47.89:0,48,387	1/1:2,17:19:42.07:436,42,0	1/1:2,8:11:23.89:238,24,0	1/1:3,13:17:38.97:398,39,0	0/0:25,0:25:65.89:0,66,541	0/0:34,0:34:26.25:0,26,623	0/0:28,0:28:68.20:0,68,588	0/0:20,0:21:61.97:0,62,498
chr10	75784497	.	AGGTTC	A	4779.37	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.616;DP=469;FS=1.557;HRun=0;HaplotypeScore=91.3708;InbreedingCoeff=0.9734;MQ=77.00;MQ0=0;MQRankSum=-12.542;QD=58.29;ReadPosRankSum=0.145;VQSLOD=5.2133;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:10:24.08:537,24,0	0/0:8,0:8:24.08:0,24,799	0/0:10,0:10:28.34:0,28,703	0/0:13,0:13:12.80:0,13,774	0/0:32,0:32:96.33:0,96,3012	0/0:23,0:23:69.22:0,69,2149	0/0:13,0:13:39.13:0,39,1300	0/0:38,0:38:99:0,114,3457	1/1:0,16:16:45.15:1046,45,0	0/0:21,0:21:60.21:0,60,1914	0/0:23,0:23:69.24:0,69,2171	1/1:0,12:12:27.09:628,27,0	1/1:0,13:13:39.13:908,39,0	0/0:16,0:16:48.15:0,48,1523	0/0:16,0:16:48.16:0,48,1498	0/0:16,0:16:48.16:0,48,1536	0/0:15,0:15:42.14:0,42,1267	0/0:18,0:18:51.18:0,51,1620	0/0:20,0:20:60.21:0,60,1894	0/0:25,0:25:75.26:0,75,2361	0/0:11,0:11:33.11:0,33,1099	1/1:0,6:6:18.06:417,18,0	1/1:0,20:20:51.13:1106,51,0	1/1:0,5:5:6.02:139,6,0	0/0:13,0:13:39.13:0,39,1210	0/0:24,0:24:72.25:0,72,2259	0/0:18,0:18:54.19:0,54,1757	0/0:14,0:14:42.14:0,42,1377
chr10	75785002	.	C	CT	3111.66	PASS	AB=0.744;AC=12;AF=0.214;AN=56;BaseQRankSum=-4.547;DP=673;FS=6.675;HRun=8;HaplotypeScore=67.8455;InbreedingCoeff=0.8131;MQ=83.82;MQ0=0;MQRankSum=-2.437;QD=21.61;ReadPosRankSum=1.894;VQSLOD=4.2061;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:95.96:0,96,854	0/0:13,0:13:36.02:0,36,330	0/0:22,0:23:48.02:0,48,437	0/1:16,1:18:6.63:7,0,215	0/0:33,0:33:90.04:0,90,824	0/0:22,0:22:54:0,54,485	0/0:18,0:18:48.01:0,48,434	0/0:24,0:23:60.02:0,60,545	1/1:2,16:18:17.67:457,18,0	0/0:30,0:30:66.02:0,66,604	0/0:26,0:26:72.03:0,72,655	1/1:1,17:18:51.15:589,51,0	1/1:1,26:27:66.20:762,66,0	0/0:31,0:31:87.01:0,87,787	0/0:30,0:30:75:0,75,677	0/0:21,0:21:63.01:0,63,568	0/0:34,0:34:96.01:0,96,867	0/0:25,0:25:63:0,63,570	0/0:12,0:12:36:0,36,324	0/0:34,0:34:90.01:0,90,814	0/0:38,0:38:99:0,104,931	1/1:3,17:20:48.14:554,48,0	1/1:5,18:23:44.73:519,45,0	0/1:3,17:20:9.80:405,0,10	0/0:24,0:24:66.02:0,66,604	0/0:23,0:24:53.75:0,54,492	0/0:26,0:25:75.02:0,75,681	0/0:7,0:7:21.01:0,21,192
chr10	75785851	.	ACTCATAGT	A	9412.49	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.607;DP=666;FS=3.379;HRun=0;HaplotypeScore=171.7311;InbreedingCoeff=0.9990;MQ=84.28;MQ0=0;MQRankSum=-16.441;QD=70.77;ReadPosRankSum=2.016;VQSLOD=4.7994;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.30:0,87,3872	0/0:10,0:10:30.10:0,30,1181	0/0:23,0:23:63.22:0,63,2668	0/0:23,0:23:66.23:0,66,2726	0/0:23,0:23:66.23:0,66,2796	0/0:33,0:33:99:0,99,4212	0/0:17,0:17:51.17:0,51,2184	0/0:48,0:48:99:0,135,5587	1/1:2,24:26:69.24:1971,69,0	0/0:25,0:25:72.23:0,72,2730	0/0:20,0:20:57.20:0,57,2387	1/1:2,21:23:54.19:1548,54,0	1/1:0,36:36:84.29:2408,84,0	0/0:29,0:29:84.29:0,84,3537	0/0:22,0:22:66.23:0,66,2950	0/0:22,0:22:63.22:0,63,2817	0/0:25,0:25:72.25:0,72,3061	0/0:18,0:18:54.19:0,54,2394	0/0:27,0:27:72.25:0,72,3108	0/0:27,0:27:81.28:0,81,3585	0/0:31,0:31:93.29:0,93,3878	1/1:0,15:15:42.14:1204,42,0	1/1:1,21:22:60.21:1709,60,0	1/1:0,11:11:21.13:572,21,0	0/0:16,0:16:48.14:0,48,1960	0/0:26,0:26:75.25:0,75,3099	0/0:27,0:27:81.28:0,81,3502	0/0:11,0:11:33.11:0,33,1475
chr10	75786588	.	TA	T	2455.87	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.298;DP=522;FS=0.833;HRun=10;HaplotypeScore=68.8560;InbreedingCoeff=0.9728;MQ=81.86;MQ0=1;MQRankSum=-4.046;QD=18.61;ReadPosRankSum=0.467;VQSLOD=4.2916;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:92.98:807,93,0	0/0:11,0:11:33.09:0,33,365	0/0:23,1:23:18.61:0,19,373	0/0:26,0:21:4.83:0,5,233	0/0:20,0:20:42.07:0,42,445	0/0:13,0:13:36.10:0,36,396	0/0:24,0:24:66.18:0,66,729	0/0:22,0:22:60.13:0,60,636	1/1:9,10:20:46.99:389,47,0	0/0:18,0:18:51.14:0,51,561	0/0:20,0:21:56.96:0,57,592	1/1:6,15:21:44.98:390,45,0	1/1:6,11:17:35.99:312,36,0	0/0:15,1:17:18.94:0,19,420	0/0:12,0:12:24.06:0,24,266	0/0:15,0:15:42.08:0,42,447	0/0:34,0:34:93.23:0,93,1012	0/0:14,0:14:39.09:0,39,422	0/0:14,0:14:39.11:0,39,431	0/0:12,0:12:27.06:0,27,291	0/0:18,0:18:42.09:0,42,455	1/1:1,10:11:29.99:260,30,0	1/1:4,8:12:22.69:185,23,0	1/1:4,13:17:35.98:309,36,0	0/0:21,0:21:30.22:0,30,540	0/0:13,0:13:33.09:0,33,365	0/0:29,0:29:72.18:0,72,786	0/0:12,0:12:36.10:0,36,397
chr10	75786605	.	TC	T	2179.45	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.258;DP=543;FS=1.491;HRun=6;HaplotypeScore=75.1691;InbreedingCoeff=0.9986;MQ=87.80;MQ0=1;MQRankSum=-8.538;QD=23.19;ReadPosRankSum=0.257;VQSLOD=3.0249;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:93.27:0,93,1193	0/0:11,0:11:30.10:0,30,392	0/0:26,0:25:23.48:0,23,485	0/0:32,0:29:43.89:0,44,605	0/0:18,0:18:48.16:0,48,631	0/0:15,0:15:33.11:0,33,431	0/0:25,0:25:69.22:0,69,907	0/0:20,0:20:48.08:0,48,580	1/1:1,16:17:48.12:514,48,0	0/0:22,0:22:57.16:0,57,722	0/0:20,0:20:48.16:0,48,631	1/1:3,14:17:45.10:475,45,0	1/1:1,16:17:45.11:482,45,0	0/0:19,0:19:54.13:0,54,653	0/0:14,0:14:42.12:0,42,537	0/0:15,0:15:45.13:0,45,575	0/0:34,0:34:96.29:0,96,1236	0/0:13,0:13:36.12:0,36,469	0/0:20,0:20:47.98:0,48,592	0/0:14,0:14:36.11:0,36,460	0/0:21,0:21:60.18:0,60,772	1/1:1,12:13:30.07:322,30,0	1/1:2,10:11:24.06:257,24,0	1/1:6,12:18:29.58:318,30,0	0/0:22,0:22:60.16:0,60,740	0/0:17,0:16:39.13:0,39,512	0/0:22,0:22:60.20:0,60,789	0/0:13,0:13:36.12:0,36,473
chr10	75789130	.	C	CTGTTGTTGTTGT	11831.03	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=0.962;DP=901;FS=15.496;HRun=0;HaplotypeScore=286.1977;InbreedingCoeff=0.8881;MQ=68.57;MQ0=4;MQRankSum=-12.791;QD=40.94;ReadPosRankSum=-5.060;VQSLOD=2.6139;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:53,0:51:39.93:1484,40,0	0/0:14,0:14:36.12:0,36,1228	0/0:30,0:23:9.02:0,9,206	0/0:34,0:31:30.01:0,30,654	0/0:29,0:32:54.17:0,54,1523	0/0:29,0:29:51.17:0,51,1635	0/0:30,0:30:51.13:0,51,1356	0/0:15,0:30:44.13:0,44,861	1/1:20,9:30:36.08:1829,36,0	0/0:29,0:29:34.32:0,34,938	0/0:19,0:19:27.09:0,27,871	1/1:18,16:36:42.14:2379,42,0	1/1:21,17:44:57.20:2920,57,0	0/0:36,0:36:72.25:0,72,2405	0/0:49,0:49:93.31:0,93,2881	0/0:41,0:41:69.22:0,69,2209	0/1:31,0:32:22.01:22,0,1921	0/0:41,0:41:81.14:0,81,2464	0/0:24,0:26:18.05:0,18,524	0/0:30,0:30:37.35:0,37,1210	0/0:50,0:50:84.24:0,84,2514	1/1:23,14:39:39.13:1786,39,0	1/1:13,11:26:17.27:718,17,0	1/1:18,9:29:12.04:692,12,0	0/0:25,0:25:45.15:0,45,1392	0/0:22,0:22:42.14:0,42,1317	0/0:34,0:34:78.25:0,78,2490	0/0:11,0:11:15.05:0,15,517
chr10	75789749	.	G	GTTTA	52.53	PASS	AB=0.688;AC=1;AF=0.018;AN=56;BaseQRankSum=3.625;DP=534;FS=1.847;HRun=0;HaplotypeScore=86.8889;InbreedingCoeff=-0.0217;MQ=57.24;MQ0=4;MQRankSum=-3.730;QD=2.39;ReadPosRankSum=0.362;VQSLOD=1.6102;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,10:21:63.41:127,0,63	0/0:11,0:11:27.06:0,27,411	0/0:12,0:7:8.26:0,8,136	0/0:19,0:8:20.24:0,20,179	0/0:29,0:28:75.17:0,75,1155	0/0:23,0:23:69.10:0,69,997	0/0:13,0:13:39.12:0,39,624	0/0:28,0:26:74.97:0,75,826	0/0:18,0:18:30.09:0,30,474	0/0:33,0:33:89.35:0,89,1416	0/0:23,0:23:68.18:0,68,1086	0/0:13,0:13:24.08:0,24,384	0/0:16,0:16:24.07:0,24,377	0/0:8,0:8:24.03:0,24,326	0/0:19,0:19:48.03:0,48,592	0/0:15,0:15:39.11:0,39,638	0/0:20,0:20:59.91:0,60,799	0/0:16,0:16:45.04:0,45,665	0/0:23,0:22:57.07:0,57,810	0/0:22,0:22:66.03:0,66,904	0/0:7,0:7:15.77:0,16,253	0/0:18,0:18:44.94:0,45,616	0/0:21,0:20:38.87:0,39,531	0/0:7,0:7:20.99:0,21,256	0/0:20,0:20:54.18:0,54,934	0/0:34,0:34:99:0,99,1498	0/0:29,0:29:84.21:0,84,1282	0/0:15,0:15:41.92:0,42,585
chr10	75789753	.	GTTTA	G	887.50	PASS	AB=0.972;AC=12;AF=0.214;AN=56;BaseQRankSum=6.944;DP=526;FS=0.000;HRun=0;HaplotypeScore=83.1245;InbreedingCoeff=0.6641;MQ=57.12;MQ0=4;MQRankSum=3.249;QD=8.22;ReadPosRankSum=1.851;VQSLOD=1.5739;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:14.95:0,15,190	0/0:10,0:10:15:0,15,287	0/0:11,0:6:3:0,3,27	0/0:15,0:6:3:0,3,25	0/0:28,0:27:51.06:0,51,915	0/0:23,0:23:51.09:0,51,833	0/0:13,0:13:15.04:0,15,252	0/0:28,0:26:33.56:0,34,369	1/1:7,10:17:9.03:147,9,0	0/0:33,0:33:62.42:0,62,981	0/0:25,0:25:57.03:0,57,1041	1/1:6,7:13:6.02:96,6,0	1/1:4,12:16:11.83:196,12,0	0/0:8,0:8:17.41:0,17,277	0/0:15,0:15:36.03:0,36,462	0/0:16,0:16:15.12:0,15,673	0/0:21,0:21:53.98:0,54,829	0/0:18,0:18:41.98:0,42,652	0/0:21,0:20:33.07:0,33,526	0/0:23,0:23:51.08:0,51,910	0/0:6,0:6:12.01:0,12,195	1/1:8,10:18:20.88:263,21,0	1/1:5,15:19:18.02:266,18,0	0/1:7,0:7:24.61:64,0,25	0/0:20,0:20:42.07:0,42,785	0/0:33,0:33:63.14:0,63,1045	0/0:31,0:31:33.16:0,33,1020	0/1:16,1:17:25.13:25,0,211
chr10	75791079	.	C	CT	7312.03	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-15.732;DP=755;FS=19.385;HRun=3;HaplotypeScore=71.5585;InbreedingCoeff=0.9943;MQ=76.25;MQ0=1;MQRankSum=-3.530;QD=36.38;ReadPosRankSum=2.572;VQSLOD=3.0650;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,43:48:99:1626,117,0	0/0:12,0:12:33.09:0,33,385	0/0:18,0:18:54.16:0,54,633	0/0:21,0:21:34.26:0,34,387	0/0:26,0:26:72.20:0,72,851	0/0:19,0:19:54.16:0,54,648	0/0:33,0:33:93.29:0,93,1116	0/0:34,0:34:90.27:0,90,1071	1/1:1,27:28:78.26:1091,78,0	0/0:25,0:25:72.21:0,72,848	0/0:23,0:23:69.20:0,69,815	1/1:1,25:26:72.24:1008,72,0	1/1:2,28:30:81.27:1134,81,0	0/0:28,0:28:84.26:0,84,1008	0/0:44,0:44:99:0,126,1500	0/0:25,0:25:75.22:0,75,890	0/0:40,0:40:99:0,111,1332	0/0:28,0:28:81.25:0,81,970	0/0:16,0:16:45.13:0,45,530	0/0:21,0:21:63.19:0,63,756	0/0:40,0:39:99:0,108,1294	1/1:1,15:16:39.13:546,39,0	1/1:1,15:16:41.97:565,42,0	1/1:6,31:37:96.32:1342,96,0	0/0:33,0:33:90.27:0,90,1079	0/0:33,0:33:96.29:0,96,1152	0/0:30,0:30:87.24:0,87,1016	0/0:5,0:5:12.04:0,12,144
chr10	75791381	.	A	AGT	1500.92	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-9.132;DP=755;FS=15.162;HRun=0;HaplotypeScore=87.0276;InbreedingCoeff=0.9839;MQ=65.93;MQ0=1;MQRankSum=-4.230;QD=31.93;ReadPosRankSum=0.980;VQSLOD=4.6222;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,38:47:74.37:1596,74,0	0/0:14,0:14:33.10:0,33,409	0/0:21,0:17:32.71:0,33,352	0/0:28,0:24:51.09:0,51,589	0/0:32,0:32:78.23:0,78,954	0/0:18,0:18:39.12:0,39,483	0/0:20,0:20:54.15:0,54,656	0/0:34,0:34:81.23:0,81,973	0/0:36,0:36:87.24:0,87,1053	0/0:31,0:32:84.09:0,84,1019	0/0:26,0:27:72.06:0,72,868	0/0:18,0:18:54.16:0,54,657	0/0:34,0:34:81.25:0,81,1002	0/0:27,0:27:81.25:0,81,1004	0/0:32,0:33:90.11:0,90,1093	0/0:28,0:28:81.25:0,81,1004	0/0:27,0:27:78.23:0,78,953	0/0:19,0:19:42.13:0,42,521	0/0:20,0:20:45.12:0,45,545	0/0:33,0:33:81.24:0,81,992	0/0:24,0:24:69.22:0,69,855	0/0:31,0:31:87.26:0,87,1065	0/0:28,0:30:81.08:0,81,981	0/0:18,0:18:51.16:0,51,632	0/0:32,0:32:84.25:0,84,1028	0/0:36,0:36:99:0,99,1215	0/0:29,0:29:78.23:0,78,954	0/0:6,0:6:15.05:0,15,186
chr10	75792073	.	AG	A	2943.05	PASS	AB=0.888;AC=24;AF=0.444;AN=54;BaseQRankSum=8.765;DP=437;FS=0.971;HRun=11;HaplotypeScore=70.7939;InbreedingCoeff=0.2339;MQ=75.98;MQ0=0;MQRankSum=0.402;QD=9.71;ReadPosRankSum=6.340;VQSLOD=2.5448;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,1:33:47.81:154,48,0	0/1:3,1:4:15.63:16,0,55	0/1:16,1:15:0.76:1,0,145	0/1:14,0:13:10.52:11,0,24	0/1:14,2:16:26.48:26,0,123	0/0:9,0:9:11.46:0,11,77	0/1:21,5:26:95.21:95,0,275	0/0:17,0:17:9.01:0,9,90	1/1:2,24:26:56.93:468,57,0	0/1:5,1:6:15.63:16,0,54	0/0:5,0:5:6.02:0,6,64	1/1:5,26:31:74.80:615,75,0	1/1:1,21:22:59.92:492,60,0	0/0:16,0:16:27.06:0,27,284	0/1:15,2:17:22.22:22,0,196	0/0:6,0:6:12.03:0,12,128	0/0:28,0:28:48.82:0,49,578	0/0:8,0:8:14.61:0,15,102	0/1:4,1:5:13.63:19,0,14	0/0:5,0:5:12:0,12,112	0/0:26,0:26:9.51:0,10,288	1/1:2,16:18:44.95:369,45,0	1/1:1,14:15:38.95:320,39,0	1/1:1,22:23:56.67:467,57,0	0/1:15,2:17:28.45:28,0,120	0/1:12,1:13:9.60:10,0,113	0/0:11,3:14:2.41:0,2,223	./.
chr10	75794529	.	GA	G	1868.75	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.238;DP=740;FS=8.063;HRun=2;HaplotypeScore=69.1127;InbreedingCoeff=0.9969;MQ=78.40;MQ0=0;MQRankSum=-3.008;QD=32.79;ReadPosRankSum=1.721;VQSLOD=3.3223;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,56:57:99:1964,139,0	0/0:9,0:9:27.09:0,27,405	0/0:27,0:27:48.60:0,49,868	0/0:16,0:15:40.11:0,40,590	0/0:38,0:38:99:0,114,1648	0/0:26,0:26:75.25:0,75,1123	0/0:16,0:16:48.16:0,48,719	0/0:29,0:29:87.29:0,87,1285	0/0:22,0:22:60.17:0,60,842	0/0:27,0:27:78.26:0,78,1151	0/0:23,0:23:66.22:0,66,989	0/0:26,0:26:72.24:0,72,1077	0/0:21,0:21:60.19:0,60,881	0/0:28,0:28:84.28:0,84,1237	0/0:27,0:27:81.24:0,81,1157	0/0:40,0:40:99:0,120,1757	0/0:32,0:32:96.21:0,96,1326	0/0:19,0:19:57.17:0,57,831	0/0:28,0:28:84.23:0,84,1184	0/0:34,0:34:96.33:0,96,1437	0/0:24,0:24:72.21:0,72,1033	0/0:18,0:18:39.81:0,40,669	0/0:24,0:24:69.19:0,69,974	0/0:31,0:31:81.26:0,81,1193	0/0:17,0:17:48.15:0,48,700	0/0:41,0:41:99:0,120,1676	0/0:31,0:31:93.30:0,93,1370	0/0:8,0:8:24.08:0,24,358
chr10	75794721	.	G	GTTTGTT	6115.93	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-5.160;DP=724;FS=9.219;HRun=0;HaplotypeScore=137.1293;InbreedingCoeff=0.9925;MQ=61.52;MQ0=10;MQRankSum=-10.125;QD=34.75;ReadPosRankSum=2.437;VQSLOD=4.3381;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,18:29:14.88:1267,15,0	0/0:8,0:8:21.07:0,21,401	0/0:36,0:25:43.50:0,43,694	0/0:31,0:18:30.10:0,30,452	0/0:26,0:26:54.17:0,54,1049	0/0:22,0:22:54.18:0,54,1125	0/0:30,0:30:66.20:0,66,1147	0/0:24,0:24:54.17:0,54,892	1/1:6,6:17:18.02:515,18,0	0/0:32,0:32:84.29:0,84,1684	0/0:22,0:22:57.19:0,57,1125	1/1:9,11:21:24.03:717,24,0	1/1:10,18:30:32.74:1091,33,0	0/0:19,0:19:42.14:0,42,897	0/0:22,0:22:57.18:0,57,1064	0/0:21,0:21:54.18:0,54,1111	0/0:44,0:44:99:0,111,2008	0/0:27,0:27:54.13:0,54,970	0/0:21,0:21:51.12:0,51,872	0/0:35,0:35:81.22:0,81,1410	0/0:40,0:39:83.33:0,83,1758	1/1:3,18:22:42.10:1160,42,0	1/1:10,11:23:26.08:681,26,0	1/1:11,15:30:21.07:685,21,0	0/0:18,0:18:39.11:0,39,745	0/0:31,0:31:81.26:0,81,1540	0/0:26,0:26:63.20:0,63,1219	0/0:10,0:9:21.07:0,21,449
chr10	75795790	.	ATATT	A	3453.69	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.825;DP=563;FS=3.673;HRun=0;HaplotypeScore=91.7382;InbreedingCoeff=0.9922;MQ=65.90;MQ0=1;MQRankSum=-3.447;QD=32.89;ReadPosRankSum=3.415;VQSLOD=3.6835;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:60.16:0,60,1426	0/0:11,0:11:30.10:0,30,758	0/0:11,0:7:18.04:0,18,311	0/0:14,0:12:15.04:0,15,320	0/0:21,0:21:48.16:0,48,1199	0/0:21,0:20:54.19:0,54,1355	0/0:14,0:14:36.12:0,36,881	0/0:39,0:39:90.24:0,90,2138	1/1:4,15:19:39.13:666,39,0	0/0:30,0:30:87.30:0,87,2215	0/0:26,0:26:78.27:0,78,1929	1/1:2,14:16:33.11:560,33,0	1/1:3,14:17:33.11:538,33,0	0/0:20,0:20:48.15:0,48,1168	0/0:21,0:21:51.16:0,51,1185	0/0:16,0:16:42.14:0,42,1020	0/0:24,0:24:69.22:0,69,1700	0/0:17,0:17:42.14:0,42,1036	0/0:27,0:27:72.25:0,72,1778	0/0:23,0:23:60.18:0,60,1403	0/0:11,0:11:27.09:0,27,660	1/1:1,18:19:54.14:914,54,0	1/1:7,12:19:26.99:460,27,0	1/1:5,10:15:17.57:315,18,0	0/0:18,0:18:48.15:0,48,1090	0/0:22,0:22:63.22:0,63,1607	0/0:35,0:35:99:0,99,2465	0/0:8,0:8:24.08:0,24,613
chr10	75797506	.	GTTTTTTTTTT	G	1789.76	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.187;DP=462;FS=1.005;HRun=11;HaplotypeScore=123.7102;InbreedingCoeff=0.8844;MQ=68.16;MQ0=5;MQRankSum=-7.588;QD=34.42;ReadPosRankSum=3.495;VQSLOD=0.6715;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:27:74.60:0,75,2330	0/0:5,0:6:15.04:0,15,657	0/0:22,0:9:24.18:0,24,412	0/0:21,0:8:12.48:0,12,183	0/0:20,0:20:57.17:0,57,2524	0/0:19,0:19:48.08:0,48,1797	0/0:12,0:11:33.10:0,33,1257	0/0:20,0:20:57.03:0,57,2022	1/1:0,11:11:18.06:553,18,0	0/0:24,0:26:78.25:0,78,3212	0/0:13,0:13:33.01:0,33,1369	1/1:0,3:3:3.01:95,3,0	1/1:0,15:15:18.06:566,18,0	0/0:18,0:19:57.05:0,57,2153	0/0:15,0:15:42.14:0,42,1678	0/0:15,0:15:42.10:0,42,1524	0/0:24,0:25:69.23:0,69,3235	0/0:22,0:23:69.17:0,69,2711	0/0:22,0:22:60.20:0,60,2428	0/0:17,0:18:48.16:0,48,2083	0/0:7,0:7:18.05:0,18,447	1/1:0,3:3:3.01:94,3,0	1/1:0,10:10:15.05:458,15,0	1/1:0,10:10:6.02:189,6,0	0/0:24,0:24:66.20:0,66,2719	0/0:31,0:31:93.26:0,93,3525	0/0:13,0:13:30.07:0,30,1202	0/0:9,0:10:30.06:0,30,994
chr10	75797673	.	T	TG	1348.03	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-1.326;DP=486;FS=14.605;HRun=2;HaplotypeScore=42.1425;InbreedingCoeff=0.9482;MQ=41.49;MQ0=32;MQRankSum=-0.847;QD=17.06;ReadPosRankSum=-0.128;VQSLOD=2.0874;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:30:48.15:0,48,594	0/0:3,0:3:9.03:0,9,112	0/0:23,0:5:15.05:0,15,181	0/0:31,0:5:10.85:0,11,117	0/0:14,0:13:23.94:0,24,258	0/0:19,0:18:27.08:0,27,334	0/0:18,0:16:27.03:0,27,316	0/0:29,0:21:57.15:0,57,690	1/1:1,11:11:9.03:130,9,0	0/0:14,0:13:36.08:0,36,430	0/0:10,0:10:15.05:0,15,185	1/1:0,13:12:21:277,21,0	1/1:0,12:12:21.07:302,21,0	0/0:16,0:16:36.06:0,36,428	0/0:23,0:20:35.99:0,36,408	0/0:9,0:8:21.01:0,21,242	0/0:26,0:17:27.02:0,27,315	0/0:25,0:18:33.10:0,33,409	0/0:18,0:14:39.12:0,39,482	0/0:8,0:7:21.02:0,21,243	0/0:26,0:23:42.12:0,42,507	1/1:0,14:14:27.03:357,27,0	1/1:0,5:5:12.04:172,12,0	1/1:0,23:22:20.92:291,21,0	0/0:19,0:18:27.08:0,27,334	0/0:19,0:19:54.16:0,54,656	0/0:11,0:10:24.07:0,24,295	0/0:10,0:8:18.06:0,18,223
chr10	75799867	.	TTG	T	2778.62	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.854;DP=549;FS=6.529;HRun=0;HaplotypeScore=78.9428;InbreedingCoeff=0.9631;MQ=62.71;MQ0=14;MQRankSum=-8.436;QD=30.53;ReadPosRankSum=1.113;VQSLOD=5.4953;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:20.88:135,21,0	0/0:9,0:9:27.09:0,27,465	0/0:47,0:17:26.24:0,26,404	0/0:38,0:14:28.05:0,28,332	0/0:47,0:47:99:0,135,2229	0/0:16,0:16:41.87:0,42,681	0/0:16,0:16:48.13:0,48,741	0/0:18,0:18:48.12:0,48,759	1/1:0,12:12:36.12:537,36,0	0/0:19,0:17:42.12:0,42,722	0/0:20,0:20:60.15:0,60,957	1/1:0,12:12:36.12:535,36,0	1/1:1,5:6:15.05:222,15,0	0/0:15,0:15:45.15:0,45,763	0/0:17,0:17:51.15:0,51,832	0/0:15,0:15:45.15:0,45,776	0/0:33,0:33:90.22:0,90,1452	0/0:27,0:27:78.07:0,78,1189	0/0:24,0:23:62.14:0,62,902	0/0:21,0:21:63.20:0,63,1060	0/0:9,0:9:27.08:0,27,440	1/1:5,17:22:60.16:833,60,0	1/1:3,13:16:48.11:663,48,0	1/1:0,1:1:3.01:45,3,0	0/0:20,0:20:51.17:0,51,870	0/0:20,0:20:60.17:0,60,959	0/0:16,0:15:45.15:0,45,766	0/0:11,0:11:33.09:0,33,541
chr10	75799876	.	CT	C	1479.48	PASS	AB=0.952;AC=15;AF=0.268;AN=56;BaseQRankSum=12.425;DP=560;FS=4.265;HRun=10;HaplotypeScore=71.4222;InbreedingCoeff=0.8747;MQ=59.15;MQ0=22;MQRankSum=-10.471;QD=10.57;ReadPosRankSum=2.047;VQSLOD=3.0500;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,5:23:41.25:291,41,0	0/0:11,0:10:27.07:0,27,299	0/0:41,1:13:18.54:0,19,159	0/1:37,2:13:16.43:16,0,48	0/0:48,1:49:99:0,120,1291	0/0:16,0:16:36.06:0,36,385	0/0:17,0:17:22.09:0,22,472	0/0:20,0:19:42.08:0,42,452	1/1:2,13:15:32.99:288,33,0	0/0:19,0:17:33.08:0,33,359	0/0:24,0:23:34.09:0,34,584	1/1:3,11:14:11.77:262,12,0	1/1:0,5:5:14.99:128,15,0	0/0:15,0:15:42.02:0,42,437	0/0:16,0:16:39.05:0,39,414	0/0:17,0:17:48.11:0,48,516	0/0:29,0:29:65.97:0,66,710	0/0:25,0:25:47.75:0,48,641	0/0:21,0:19:57.10:0,57,603	0/0:22,0:22:51.02:0,51,535	0/0:10,0:10:30.08:0,30,331	1/1:5,17:21:41.97:356,42,0	1/1:4,13:17:32.98:281,33,0	1/1:0,2:2:6:51,6,0	0/0:17,1:18:12.83:0,13,339	0/0:20,0:19:48.11:0,48,509	0/0:16,0:15:36.10:0,36,398	0/0:12,0:11:18.05:0,18,199
chr10	75799877	.	T	TC	389	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=6.685;DP=557;FS=2.487;HRun=1;HaplotypeScore=76.5822;InbreedingCoeff=0.6702;MQ=58.78;MQ0=22;MQRankSum=-4.368;QD=8.28;ReadPosRankSum=-0.568;VQSLOD=0.7341;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,8:24:16.48:469,16,0	0/0:11,0:10:30.09:0,30,402	0/0:40,0:12:6.94:0,7,152	0/0:39,0:12:17.54:0,18,134	0/0:49,0:49:99:0,138,1778	0/0:16,0:16:44.96:0,45,548	0/0:17,0:17:51.05:0,51,667	0/0:20,0:19:51.13:0,51,640	0/0:15,0:15:15.33:0,15,55	0/0:19,0:17:48.12:0,48,587	0/0:24,0:23:69.09:0,69,866	0/1:14,0:14:4.25:4,0,44	1/1:5,0:5:1.73:21,2,0	0/0:15,0:15:45.06:0,45,567	0/0:16,0:16:48.14:0,48,619	0/0:17,0:17:51.14:0,51,665	0/0:28,0:28:81.10:0,81,1018	0/0:25,0:25:67.97:0,68,876	0/0:21,0:19:55.41:0,55,726	0/0:21,0:21:60.15:0,60,764	0/0:10,0:10:30.10:0,30,408	0/0:23,0:22:20.81:0,21,72	0/0:17,0:17:14.99:0,15,58	1/1:2,0:2:1.77:5,2,0	0/0:19,0:18:42.57:0,43,549	0/0:20,0:19:57.14:0,57,702	0/0:15,0:14:42.05:0,42,544	0/0:12,0:11:33.04:0,33,375
chr10	75800980	.	CT	C	426.70	PASS	AB=0.943;AC=7;AF=0.125;AN=56;BaseQRankSum=6.170;DP=510;FS=12.931;HRun=11;HaplotypeScore=61.4926;InbreedingCoeff=0.1942;MQ=60.84;MQ0=27;MQRankSum=-2.728;QD=3.39;ReadPosRankSum=0.119;VQSLOD=-0.5970;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,17:30:65.57:483,66,0	0/0:6,0:5:15.04:0,15,160	0/0:45,0:12:8.03:0,8,60	0/1:21,2:8:4.45:27,0,4	0/0:23,2:24:3.80:0,4,399	0/0:12,1:13:11.05:0,11,285	0/0:10,0:10:8.11:0,8,179	0/1:32,2:33:25.30:25,0,379	0/0:5,0:5:3.01:0,3,32	0/0:24,1:22:3.58:0,4,333	0/0:18,0:18:23.92:0,24,317	0/0:8,0:7:8.65:0,9,58	0/0:6,0:6:8.99:0,9,83	0/1:12,0:11:0.53:1,0,165	0/0:21,0:21:21.01:0,21,415	0/0:9,0:9:27.07:0,27,286	0/0:29,1:31:49.65:0,50,669	0/0:26,1:27:45.46:0,45,422	0/0:19,0:16:19.14:0,19,187	0/0:19,0:19:31.80:0,32,385	0/1:10,1:11:0.59:1,0,193	0/0:2,0:2:6.01:0,6,62	0/0:16,0:14:23.58:0,24,211	0/1:13,1:14:7.99:8,0,132	0/0:19,0:19:44.54:0,45,420	0/0:28,1:29:44.46:0,44,639	0/0:23,0:21:42.08:0,42,431	0/0:6,0:4:6.90:0,7,66
chr10	75801399	.	C	CCTCCCT	2208.66	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-2.280;DP=392;FS=3.950;HRun=0;HaplotypeScore=92.9209;InbreedingCoeff=0.8532;MQ=71.19;MQ0=0;MQRankSum=-7.099;QD=27.96;ReadPosRankSum=2.023;VQSLOD=2.7786;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:16.59:0,17,290	0/0:5,0:5:9.03:0,9,170	0/0:22,0:18:19.29:0,19,272	0/0:9,0:8:12.04:0,12,219	0/0:12,0:12:11.60:0,12,188	0/0:13,0:13:15.02:0,15,246	0/0:23,0:23:57.17:0,57,1134	0/0:19,0:19:23.80:0,24,461	1/1:8,7:15:15.05:503,15,0	0/0:8,0:8:18.04:0,18,303	0/0:7,0:7:9.03:0,9,177	1/1:7,13:23:27.09:890,27,0	1/1:7,1:8:9.03:248,9,0	0/0:15,0:15:30.05:0,30,536	0/0:23,0:23:51.15:0,51,979	0/0:17,0:17:36.10:0,36,694	0/0:14,0:14:33.56:0,34,627	0/0:18,0:18:39.10:0,39,773	0/0:17,0:17:33.98:0,34,638	0/0:5,0:5:3:0,3,27	0/0:25,0:25:60.16:0,60,1145	1/1:3,5:9:6.02:175,6,0	1/1:3,5:10:6.02:200,6,0	1/1:7,7:14:11.84:361,12,0	0/0:11,0:11:18.01:0,18,285	0/0:12,0:12:21.07:0,21,444	0/0:16,0:16:36.09:0,36,699	0/0:9,0:9:21.07:0,21,461
chr10	75805499	.	T	TA	3120.26	PASS	AB=0.938;AC=13;AF=0.232;AN=56;BaseQRankSum=12.907;DP=691;FS=0.000;HRun=9;HaplotypeScore=77.6021;InbreedingCoeff=0.9296;MQ=73.53;MQ0=0;MQRankSum=0.094;QD=20.80;ReadPosRankSum=4.432;VQSLOD=4.1086;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:95.98:0,96,833	0/0:14,0:14:29.98:0,30,258	0/0:13,0:14:25.99:0,26,208	0/0:13,0:14:19.97:0,20,142	0/0:37,0:37:95.91:0,96,823	0/0:25,0:24:62.98:0,63,547	0/0:15,0:15:38.97:0,39,334	0/0:32,0:32:80.94:0,81,694	1/1:2,15:18:39.11:431,39,0	0/0:34,0:34:92.96:0,93,802	0/0:31,0:31:83.88:0,84,706	1/1:2,15:17:39.11:432,39,0	1/1:5,20:25:51.11:552,51,0	0/0:33,0:33:89.96:0,90,777	0/0:25,0:25:68.95:0,69,593	0/0:27,1:28:41.78:0,42,588	0/0:27,0:28:80.97:0,81,699	0/0:24,0:24:62.74:0,63,521	0/0:14,0:14:32.99:0,33,286	0/0:40,0:40:74.46:0,74,796	0/0:16,0:16:38.99:0,39,338	1/1:7,26:33:72.19:796,72,0	1/1:3,17:20:48.13:531,48,0	1/1:5,17:22:51.14:564,51,0	0/0:27,0:27:62.93:0,63,540	0/0:27,0:27:74.94:0,75,643	0/0:30,0:30:68.97:0,69,599	0/1:14,1:15:3.19:3,0,204
chr10	75806411	.	T	TC	3601.01	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.415;DP=611;FS=22.229;HRun=1;HaplotypeScore=84.9157;InbreedingCoeff=0.9855;MQ=88.57;MQ0=0;MQRankSum=-2.151;QD=30.01;ReadPosRankSum=3.826;VQSLOD=2.1695;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,1748	0/0:7,0:7:18.06:0,18,232	0/0:25,0:25:71.73:0,72,830	0/0:26,0:25:63.07:0,63,760	0/0:32,0:32:90.26:0,90,1134	0/0:28,0:28:84.23:0,84,1070	0/0:22,0:22:63.17:0,63,783	0/0:28,0:28:81.24:0,81,1015	1/1:4,13:17:9.37:347,9,0	0/0:23,0:23:69.22:0,69,889	0/0:15,0:15:42.14:0,42,545	1/1:7,15:22:41.65:633,42,0	1/1:3,23:26:47.19:702,47,0	0/0:18,0:18:51.15:0,51,645	0/0:31,0:31:90.28:0,90,1153	0/0:18,0:18:51.17:0,51,662	0/0:16,0:16:45.15:0,45,584	0/0:10,0:10:30.10:0,30,386	0/0:11,0:11:33.10:0,33,415	0/0:20,0:20:60.19:0,60,767	0/0:40,0:40:99:0,120,1526	1/1:2,15:18:52.71:629,53,0	1/1:1,10:11:18.12:358,18,0	1/1:0,26:26:75.24:933,75,0	0/0:14,0:14:42.14:0,42,542	0/0:27,0:27:75.24:0,75,972	0/0:20,0:20:57.17:0,57,724	0/0:15,0:15:45.10:0,45,536
chr10	75806954	.	CACTT	C	1356.98	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.477;DP=748;FS=3.700;HRun=0;HaplotypeScore=113.2142;InbreedingCoeff=0.9993;MQ=58.11;MQ0=16;MQRankSum=2.337;QD=46.79;ReadPosRankSum=0.321;VQSLOD=4.4404;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:28:78.22:1452,78,0	0/0:13,0:13:39.13:0,39,1068	0/0:27,0:18:51.17:0,51,1188	0/0:27,0:16:39.13:0,39,1045	0/0:36,0:36:99:0,108,2896	0/0:33,0:33:99:0,99,2710	0/0:32,0:32:90.31:0,90,2391	0/0:24,0:24:63.22:0,63,1724	0/0:34,0:34:99:0,102,2795	0/0:32,0:32:96.33:0,96,2621	0/0:21,0:21:63.22:0,63,1726	0/0:22,0:22:66.23:0,66,1764	0/0:27,0:27:81.26:0,81,2162	0/0:35,0:35:99:0,105,2830	0/0:36,0:36:99:0,99,2639	0/0:26,0:26:78.27:0,78,2111	0/0:48,0:48:99:0,141,3805	0/0:27,0:27:78.19:0,78,1973	0/0:20,0:18:51.18:0,51,1378	0/0:21,0:21:63.22:0,63,1714	0/0:26,0:26:75.24:0,75,1984	0/0:25,0:25:75.26:0,75,2055	0/0:13,0:13:39.13:0,39,1064	0/0:29,0:29:84.29:0,84,2301	0/0:24,0:24:69.24:0,69,1881	0/0:28,0:28:84.29:0,84,2302	0/0:23,0:23:69.24:0,69,1882	0/0:10,0:10:30.10:0,30,778
chr10	75808458	.	T	TTG	1872.60	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.747;DP=752;FS=2.211;HRun=0;HaplotypeScore=93.1503;InbreedingCoeff=0.9983;MQ=70.30;MQ0=0;MQRankSum=-2.602;QD=49.28;ReadPosRankSum=0.998;VQSLOD=4.1953;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:99:1967,102,0	0/0:12,0:12:30.07:0,30,434	0/0:23,0:20:48.03:0,48,723	0/0:27,0:27:55.19:0,55,785	0/0:24,0:24:72.24:0,72,1078	0/0:18,0:18:51.17:0,51,777	0/0:27,0:27:78.19:0,78,1087	0/0:31,0:31:90.29:0,90,1341	0/0:42,0:42:99:0,120,1786	0/0:28,0:28:78.24:0,78,1123	0/0:18,0:18:54.17:0,54,806	0/0:26,0:26:75.23:0,75,1107	0/0:43,0:43:99:0,123,1840	0/0:27,0:27:75.24:0,75,1126	0/0:41,0:41:99:0,120,1795	0/0:30,0:30:87.30:0,87,1331	0/0:27,0:26:75.25:0,75,1144	0/0:13,0:13:36.12:0,36,546	0/0:31,0:31:84.26:0,84,1246	0/0:28,0:28:78.23:0,78,1131	0/0:44,0:44:99:0,129,1883	0/0:21,0:21:60.18:0,60,878	0/0:19,0:19:57.16:0,57,828	0/0:27,0:27:81.25:0,81,1197	0/0:14,0:14:42.13:0,42,624	0/0:38,0:38:99:0,111,1658	0/0:26,0:26:75.24:0,75,1122	0/0:9,0:9:27.09:0,27,413
chr10	75810991	.	AT	A	1719.62	PASS	AB=0.905;AC=17;AF=0.304;AN=56;BaseQRankSum=9.523;DP=495;FS=6.556;HRun=11;HaplotypeScore=53.2364;InbreedingCoeff=0.7636;MQ=73.69;MQ0=0;MQRankSum=-1.158;QD=12.74;ReadPosRankSum=1.747;VQSLOD=3.2704;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,16:20:35.92:296,36,0	0/1:5,1:6:6.53:7,0,132	0/1:12,1:13:3.37:3,0,142	0/1:12,1:12:36.91:37,0,73	0/0:19,1:20:13.82:0,14,335	0/0:25,0:25:63.15:0,63,664	0/0:12,0:12:30.08:0,30,320	0/0:18,0:18:33.08:0,33,352	1/1:2,12:14:29.96:246,30,0	0/0:18,0:18:42.11:0,42,447	0/0:12,0:12:35.95:0,36,360	1/1:2,12:14:32.96:270,33,0	1/1:2,16:18:44.93:369,45,0	0/0:19,1:20:29.50:0,30,507	0/0:24,0:24:57.14:0,57,608	0/0:20,3:23:7.85:0,8,495	0/0:32,0:34:86.91:0,87,884	0/0:24,0:24:63.09:0,63,647	0/0:14,2:16:17.50:0,18,384	0/0:25,0:25:34.98:0,35,552	0/0:10,0:10:30.08:0,30,320	1/1:1,5:6:14.98:123,15,0	1/1:5,13:18:35.94:296,36,0	1/1:1,12:13:32.96:271,33,0	0/0:19,1:20:26.48:0,26,487	0/0:25,0:25:63.13:0,63,660	0/0:27,0:27:69.12:0,69,722	0/0:7,0:7:15.04:0,15,160
chr10	75811203	.	T	TA	1496.72	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=-5.449;DP=566;FS=1.135;HRun=6;HaplotypeScore=62.9968;InbreedingCoeff=0.8397;MQ=78.09;MQ0=4;MQRankSum=1.432;QD=10.69;ReadPosRankSum=1.457;VQSLOD=1.3034;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,1192	0/0:6,0:6:15.03:0,15,153	0/1:44,0:29:4.70:5,0,288	0/1:30,0:15:2.90:3,0,101	0/0:22,0:22:60.05:0,60,582	0/0:21,0:21:54.03:0,54,525	0/0:19,0:19:45.10:0,45,458	0/0:19,1:20:14.91:0,15,325	1/1:0,7:7:9.03:114,9,0	0/0:20,0:20:48.10:0,48,486	0/0:22,0:22:63.13:0,63,637	1/1:1,9:10:15.04:189,15,0	1/1:2,14:16:30.10:378,30,0	0/0:18,0:18:54.08:0,54,535	0/0:16,0:16:39.03:0,39,375	0/0:15,0:15:33.07:0,33,336	0/0:31,0:31:90.07:0,90,865	0/0:37,0:37:90.05:0,90,873	0/0:20,0:20:42.07:0,42,413	0/0:17,0:17:45.08:0,45,449	0/0:18,0:18:51.08:0,51,507	1/1:1,8:9:23.99:273,24,0	1/1:1,14:15:36.12:454,36,0	1/1:0,8:8:21.07:265,21,0	0/0:28,0:28:74.90:0,75,745	0/0:24,0:24:63.13:0,63,636	0/0:22,0:21:60.06:0,60,581	0/0:9,0:9:27.03:0,27,266
chr10	75811678	.	G	GACAACA	9111.34	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.332;DP=753;FS=1.836;HRun=0;HaplotypeScore=156.8082;InbreedingCoeff=0.9991;MQ=72.85;MQ0=1;MQRankSum=-15.236;QD=56.24;ReadPosRankSum=-2.788;VQSLOD=4.1473;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,99,1993	0/0:9,0:9:24.55:0,25,515	0/0:27,0:27:39.13:0,39,814	0/0:31,0:29:51.17:0,51,1056	0/0:37,0:38:95.16:0,95,1714	0/0:32,0:32:84.29:0,84,1789	0/0:20,0:20:42.14:0,42,901	0/0:43,0:43:93.15:0,93,1844	1/1:4,19:23:51.17:1640,51,0	0/0:34,0:34:72.25:0,72,1536	0/0:14,0:14:36.12:0,36,772	1/1:2,27:32:66.23:2200,66,0	1/1:14,10:28:48.16:1510,48,0	0/0:32,0:32:84.29:0,84,1788	0/0:28,0:28:63.17:0,63,1269	0/0:35,0:35:72.25:0,72,1545	0/0:23,0:23:57.15:0,57,1178	0/0:14,0:14:36.12:0,36,772	0/0:28,0:28:51.08:0,51,988	0/0:36,0:36:90.29:0,90,1891	0/0:24,0:24:57.20:0,57,1223	1/1:7,21:30:57.20:1772,57,0	1/1:9,16:27:42.05:1181,42,0	1/1:8,14:22:27.09:808,27,0	0/0:17,0:17:42.11:0,42,843	0/0:22,0:22:48.11:0,48,937	0/0:31,0:31:69.24:0,69,1462	0/0:12,0:12:27.09:0,27,577
chr10	75811901	.	C	CAG	9250.76	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-10.682;DP=774;FS=1.825;HRun=0;HaplotypeScore=89.1022;InbreedingCoeff=0.9999;MQ=84.53;MQ0=0;MQRankSum=-2.161;QD=49.47;ReadPosRankSum=3.922;VQSLOD=6.1564;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1608	0/0:14,0:14:39.13:0,39,574	0/0:28,0:28:64.99:0,65,979	0/0:23,0:23:63.10:0,63,885	0/0:35,0:35:96.32:0,96,1400	0/0:37,0:37:99:0,105,1526	0/0:29,0:29:87.29:0,87,1279	0/0:26,0:26:78.25:0,78,1130	1/1:1,29:30:81.28:1517,81,0	0/0:35,0:35:99:0,102,1499	0/0:24,0:24:72.21:0,72,1037	1/1:0,27:27:75.26:1403,75,0	1/1:2,39:42:99:2070,111,0	0/0:28,0:28:78.26:0,78,1147	0/0:40,0:40:99:0,120,1766	0/0:36,1:37:49.13:0,49,1423	0/0:16,0:16:45.15:0,45,662	0/0:13,0:13:39.10:0,39,552	0/0:11,0:11:33.10:0,33,468	0/0:28,0:28:81.27:0,81,1193	0/0:33,0:33:93.31:0,93,1368	1/1:2,41:43:99:1957,105,0	1/1:0,21:21:57.20:1067,57,0	1/1:1,23:24:66.23:1236,66,0	0/0:27,0:27:81.27:0,81,1192	0/0:24,0:24:72.24:0,72,1060	0/0:21,0:21:57.13:0,57,776	0/0:20,0:20:57.15:0,57,797
chr10	75812664	.	C	CT	1778.17	PASS	AB=0.605;AC=6;AF=0.107;AN=56;BaseQRankSum=12.281;DP=614;FS=0.473;HRun=5;HaplotypeScore=82.3343;InbreedingCoeff=0.0489;MQ=65.37;MQ0=2;MQRankSum=-7.562;QD=16.02;ReadPosRankSum=1.478;VQSLOD=3.1894;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,135,1531	0/0:13,0:13:39.10:0,39,433	0/0:18,0:9:10.21:0,10,156	0/0:18,0:15:14.18:0,14,235	0/0:33,0:33:93.26:0,93,1054	0/0:18,0:18:54.15:0,54,612	0/0:16,0:16:48.14:0,48,544	0/0:28,0:28:69.20:0,69,782	0/1:6,13:19:11.35:285,0,11	0/0:24,0:24:72.21:0,72,815	0/0:24,0:24:66.19:0,66,748	0/1:8,15:22:19.53:398,0,20	0/1:4,6:10:27.74:200,0,28	0/0:23,0:23:63.16:0,63,705	0/0:19,0:19:54.12:0,54,599	0/0:21,0:21:60.16:0,60,671	0/0:30,0:30:78.20:0,78,872	0/0:18,0:18:54.15:0,54,603	0/0:26,0:26:75.20:0,75,840	0/0:20,0:20:54.15:0,54,612	0/0:14,0:14:42.10:0,42,465	0/1:4,13:16:1.82:395,0,2	0/1:9,20:28:63.71:423,0,64	0/1:6,7:13:11.45:202,0,11	0/0:18,0:18:54.15:0,54,612	0/0:28,0:28:78.22:0,78,884	0/0:23,0:23:66.19:0,66,748	0/0:20,0:20:15.06:0,15,539
chr10	75812669	.	C	CTTTTT	3757.09	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.524;DP=625;FS=0.446;HRun=6;HaplotypeScore=124.3052;InbreedingCoeff=0.8990;MQ=65.01;MQ0=3;MQRankSum=-6.278;QD=32.96;ReadPosRankSum=-1.772;VQSLOD=-0.1048;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,135,2126	0/0:12,0:12:36.06:0,36,533	0/0:21,0:9:5.52:0,6,73	0/0:17,0:14:11.70:0,12,200	0/0:32,0:32:90.14:0,90,1343	0/0:19,0:19:54.12:0,54,854	0/0:18,0:17:36.04:0,36,565	0/0:29,0:29:63.18:0,63,1008	1/1:10,8:18:22.50:728,22,0	0/0:24,0:24:57.14:0,57,929	0/0:25,0:25:63.12:0,63,987	1/1:14,9:23:37.46:974,37,0	1/1:7,4:11:1.20:471,1,0	0/0:22,0:22:60.14:0,60,993	0/0:19,0:19:45.07:0,45,686	0/0:21,0:21:51.11:0,51,820	0/0:28,0:28:75.18:0,75,1227	0/0:19,0:19:48.05:0,48,730	0/0:24,0:24:72.13:0,72,998	0/0:21,0:21:54.09:0,54,827	0/0:16,0:16:42.06:0,42,640	1/1:14,4:17:32.23:587,32,0	1/1:23,7:29:16.53:821,17,0	1/1:11,2:13:6.34:177,6,0	0/0:20,0:20:57.09:0,57,823	0/0:29,0:29:78.18:0,78,1214	0/0:23,0:23:66.10:0,66,1072	0/0:18,0:18:45.78:0,46,787
chr10	75813114	.	T	TGG	567.21	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-3.009;DP=614;FS=8.058;HRun=9;HaplotypeScore=99.5157;InbreedingCoeff=0.6402;MQ=71.71;MQ0=0;MQRankSum=0.556;QD=11.58;ReadPosRankSum=-2.858;VQSLOD=0.6558;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,23:37:45.11:661,45,0	0/0:16,0:16:36.08:0,36,383	0/0:10,0:10:2.38:0,2,107	0/1:12,0:12:2.16:2,0,143	0/0:29,0:29:63.10:0,63,670	0/0:21,0:21:57.12:0,57,607	0/0:26,0:26:51.04:0,51,533	0/0:26,0:26:54.08:0,54,567	0/0:29,0:29:56.27:0,56,336	0/0:27,0:27:66.15:0,66,702	0/0:22,0:22:54.13:0,54,574	0/0:18,0:18:25.74:0,26,142	0/0:18,0:18:37.10:0,37,228	0/0:25,0:25:65.93:0,66,683	0/0:22,0:22:60.13:0,60,630	0/0:23,0:23:66.14:0,66,694	0/0:28,0:28:60.07:0,60,631	0/0:8,0:8:14.99:0,15,150	0/0:22,0:22:51.06:0,51,529	0/0:27,0:27:66.12:0,66,693	0/0:26,0:26:69.13:0,69,734	0/0:21,0:21:36.75:0,37,195	0/0:17,0:17:22.19:0,22,134	0/0:13,0:13:29.17:0,29,170	0/0:18,0:18:48.12:0,48,511	0/0:33,0:33:81.16:0,81,856	0/0:29,0:28:72.13:0,72,754	0/0:11,0:11:27.03:0,27,287
chr10	75819119	.	C	CTGAGGGATTCTCAGACATCACA	2206.15	PASS	AB=0.714;AC=15;AF=0.938;AN=16;BaseQRankSum=-2.192;DP=30;FS=3.245;HRun=0;HaplotypeScore=27.8163;MQ=163.86;MQ0=0;MQRankSum=-0.465;QD=100.28;ReadPosRankSum=-1.262;VQSLOD=2.5131;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	1/1:1,0:2:6.02:485,6,0	0/1:6,1:10:10.25:1481,0,10	./.	./.	1/1:1,0:1:2.99:23,3,0	./.	./.	./.	./.	./.	./.	1/1:2,0:2:3.01:50,3,0	./.	1/1:0,0:1:3.01:106,3,0	./.	./.	1/1:1,0:1:1.25:3,1,0	1/1:1,0:1:3.01:41,3,0	./.	./.	./.	1/1:3,0:4:6.02:92,6,0	./.	./.	./.	./.
chr10	75820340	.	C	CTT	2134.03	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=0.597;DP=507;FS=1.110;HRun=10;HaplotypeScore=71.4788;InbreedingCoeff=0.9925;MQ=73.79;MQ0=0;MQRankSum=0.128;QD=24.53;ReadPosRankSum=-0.215;VQSLOD=3.3133;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:14:35.79:0,36,347	0/0:9,0:9:24.03:0,24,244	0/0:16,0:16:18.26:0,18,194	0/0:17,0:17:35.59:0,36,332	0/0:24,0:24:57.04:0,57,572	0/0:13,0:13:33.06:0,33,335	0/0:12,0:12:26.93:0,27,275	0/0:32,0:32:73.69:0,74,748	1/1:3,11:14:27.09:402,27,0	0/0:18,0:18:51.09:0,51,508	0/0:19,0:19:36:0,36,366	1/1:1,11:13:26.58:367,27,0	1/1:2,15:17:23.62:357,24,0	0/0:11,0:11:17.95:0,18,183	0/0:24,0:24:63.07:0,63,627	0/0:16,0:16:42.08:0,42,427	0/0:23,0:23:63.09:0,63,636	0/0:17,0:17:42.08:0,42,423	0/0:26,0:26:72.16:0,72,732	0/0:30,0:30:75.13:0,75,756	0/0:8,0:8:21.04:0,21,214	1/1:3,15:18:42.05:560,42,0	1/1:2,9:14:20.55:277,21,0	1/1:1,10:11:24.08:357,24,0	0/0:18,0:18:35.58:0,36,346	0/0:27,0:27:59.94:0,60,609	0/0:35,0:35:93.17:0,93,945	0/0:10,0:10:24.03:0,24,244
chr10	75822411	.	T	TTTTGGTTG	11257.51	PASS	AB=0.967;AC=13;AF=0.232;AN=56;BaseQRankSum=-4.176;DP=645;FS=4.241;HRun=0;HaplotypeScore=151.5789;InbreedingCoeff=0.8994;MQ=80.13;MQ0=0;MQRankSum=-14.918;QD=69.92;ReadPosRankSum=-1.642;VQSLOD=4.1092;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,3049	0/0:10,0:9:27.09:0,27,737	0/0:24,0:24:60.18:0,60,1425	0/0:13,0:13:32.66:0,33,646	0/0:25,0:25:66.23:0,66,1803	0/0:26,0:26:78.23:0,78,1981	0/0:15,0:15:42.14:0,42,1148	0/0:34,0:34:93.31:0,93,2444	1/1:8,12:25:57.20:2207,57,0	0/0:25,0:25:69.24:0,69,1850	0/0:22,0:22:63.22:0,63,1691	1/1:2,15:23:48.16:2061,48,0	1/1:6,13:27:56.87:2258,57,0	0/0:27,0:27:81.25:0,81,2071	0/0:26,0:26:75.25:0,75,1926	0/1:28,1:29:47.93:48,0,1927	0/0:19,0:19:57.20:0,57,1510	0/0:18,0:18:54.19:0,54,1420	0/0:19,0:19:57.19:0,57,1410	0/0:32,0:32:87.24:0,87,2210	0/0:31,0:31:84.28:0,84,2179	1/1:3,9:17:39:1255,39,0	1/1:6,15:23:60.12:2351,60,0	1/1:11,4:17:33.04:1077,33,0	0/0:22,0:22:57.20:0,57,1523	0/0:21,0:21:54.17:0,54,1416	0/0:25,0:25:69.23:0,69,1756	0/0:10,0:10:30.10:0,30,811
chr10	75824860	.	CTGTTTTGTTT	C	3975.04	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.503;DP=573;FS=5.970;HRun=0;HaplotypeScore=162.4439;InbreedingCoeff=0.9395;MQ=59.42;MQ0=5;MQRankSum=-10.762;QD=31.55;ReadPosRankSum=1.456;VQSLOD=3.0862;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:19:15.05:349,15,0	0/0:13,0:13:33.11:0,33,1455	0/0:14,0:11:6.02:0,6,160	0/0:19,0:8:11.91:0,12,214	0/0:25,0:25:51.18:0,51,2310	0/0:22,0:21:45.15:0,45,2148	0/0:12,0:12:18.06:0,18,879	0/0:36,0:35:48.16:0,48,1917	1/1:4,15:19:30.10:902,30,0	0/0:24,0:24:54.19:0,54,2596	0/0:29,0:29:54.19:0,54,2611	1/1:8,16:24:30.10:849,30,0	1/1:6,11:17:24.08:668,24,0	0/0:13,0:13:24.08:0,24,1194	0/0:20,0:20:42.13:0,42,1826	0/0:21,0:21:48.16:0,48,2193	0/0:31,0:31:69.24:0,69,3105	0/0:27,0:27:66.23:0,66,2707	0/0:23,0:23:36.12:0,36,1526	0/0:25,0:25:54.19:0,54,2495	0/0:11,0:11:30.10:0,30,1372	1/1:4,3:7:6.02:180,6,0	1/1:11,12:22:25.81:756,26,0	1/1:8,9:17:9.01:271,9,0	0/0:19,0:19:45.15:0,45,2038	0/0:23,0:23:48.16:0,48,2166	0/0:24,0:24:51.16:0,51,2276	0/0:15,0:15:30.10:0,30,1256
chr10	75826747	.	TC	T	2962.97	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.120;DP=610;FS=0.000;HRun=7;HaplotypeScore=63.7934;InbreedingCoeff=0.9959;MQ=89.52;MQ0=0;MQRankSum=-1.437;QD=23.52;ReadPosRankSum=3.054;VQSLOD=3.7202;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.22:0,69,863	0/0:7,0:7:15.05:0,15,189	0/0:24,0:24:43.22:0,43,684	0/0:23,0:23:41.42:0,41,431	0/0:31,0:31:81.26:0,81,1018	0/0:18,0:18:48.14:0,48,591	0/0:25,0:25:72.23:0,72,905	0/0:34,0:34:87.27:0,87,1082	1/1:0,26:26:75.17:765,75,0	0/0:30,0:30:81.26:0,81,1018	0/0:20,0:20:57.18:0,57,708	1/1:0,14:14:42.09:428,42,0	1/1:2,19:21:51.11:520,51,0	0/0:17,0:17:51.16:0,51,640	0/0:17,0:17:51.16:0,51,642	0/0:23,0:23:69.22:0,69,868	0/0:33,0:33:96.31:0,96,1207	0/0:13,0:13:33.11:0,33,415	0/0:16,0:16:39.12:0,39,491	0/0:29,0:29:84.23:0,84,1016	0/0:17,0:17:45.14:0,45,565	1/1:0,14:14:39.09:397,39,0	1/1:3,21:24:51.12:521,51,0	1/1:3,24:27:51.11:520,51,0	0/0:22,0:22:66.21:0,66,830	0/0:16,0:16:48.15:0,48,600	0/0:34,0:33:99:0,102,1283	0/0:9,0:9:21.05:0,21,248
chr10	75827112	.	TGAGA	T	1155.38	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=6.510;DP=549;FS=7.631;HRun=0;HaplotypeScore=99.1598;InbreedingCoeff=0.7924;MQ=58.65;MQ0=16;MQRankSum=-1.382;QD=12.98;ReadPosRankSum=0.052;VQSLOD=2.0871;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:8.79:0,9,174	0/0:10,0:10:30.10:0,30,755	0/0:25,0:11:3.31:0,3,279	0/0:26,0:10:17.98:0,18,265	0/0:29,0:29:75.16:0,75,1707	0/0:24,0:24:54.15:0,54,1113	0/0:21,0:21:48.18:0,48,1027	0/0:17,0:16:33.11:0,33,786	0/1:19,0:19:23.15:260,0,23	0/0:23,0:21:57.17:0,57,1353	0/0:25,0:25:63.20:0,63,1586	1/1:11,0:11:15.05:221,15,0	1/1:12,0:11:21.03:233,21,0	0/0:17,0:17:48.12:0,48,1053	0/0:26,0:26:67.10:0,67,1518	0/0:23,0:23:54.18:0,54,1286	0/0:35,0:35:99:0,102,2443	0/0:10,0:10:18.95:0,19,505	0/0:12,0:11:27.08:0,27,599	0/0:29,0:28:78.13:0,78,1874	0/0:15,0:15:39.04:0,39,956	1/1:18,0:18:29.61:321,30,0	1/1:10,5:14:2.96:19,3,0	1/1:14,0:14:24:270,24,0	0/0:23,0:23:63.19:0,63,1500	0/0:27,0:26:72.22:0,72,1686	0/0:18,0:17:48.08:0,48,1035	0/0:9,0:8:21.07:0,21,507
chr10	75827115	.	GA	G	512.91	PASS	AB=0.700;AC=11;AF=0.196;AN=56;BaseQRankSum=8.177;DP=508;FS=6.783;HRun=1;HaplotypeScore=69.9978;InbreedingCoeff=0.7982;MQ=57.41;MQ0=16;MQRankSum=-1.439;QD=7.66;ReadPosRankSum=-0.485;VQSLOD=0.4115;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:8.61:0,9,142	0/0:11,0:11:30.57:0,31,479	0/0:22,0:9:5.28:0,5,211	0/0:24,0:9:17.99:0,18,238	0/0:28,0:28:78.22:0,78,1174	0/0:24,0:24:53.94:0,54,823	0/0:20,0:20:43.58:0,44,713	0/0:13,0:12:33.11:0,33,528	0/1:8,5:14:27.49:120,0,27	0/0:23,0:21:60.20:0,60,937	0/0:24,0:24:63.20:0,63,984	1/1:5,1:6:14.28:96,14,0	1/1:7,1:8:17.65:123,18,0	0/0:16,0:16:48.12:0,48,684	0/0:26,0:26:69.17:0,69,1061	0/0:20,0:20:54.66:0,55,860	0/0:35,0:35:99:0,105,1629	0/0:8,0:8:24.05:0,24,356	0/0:11,0:10:26.76:0,27,390	0/0:30,0:29:81.19:0,81,1283	0/0:15,0:15:39.04:0,39,595	1/1:9,3:12:20.96:183,21,0	1/1:9,4:12:2.97:20,3,0	1/1:7,4:13:21.76:138,22,0	0/0:23,0:23:63.19:0,63,980	0/0:25,0:24:72.22:0,72,1104	0/0:19,0:18:51.14:0,51,742	0/0:8,0:7:21.07:0,21,334
chr10	75827125	.	GGA	G	280.19	PASS	AB=0.942;AC=18;AF=0.360;AN=50;BaseQRankSum=4.751;DP=525;FS=4.775;HRun=0;HaplotypeScore=81.9526;InbreedingCoeff=0.1401;MQ=53.22;MQ0=21;MQRankSum=0.869;QD=1.22;ReadPosRankSum=-0.111;VQSLOD=1.1237;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/1:13,0:13:24.10:24,0,81	./.	./.	0/1:27,0:27:15.40:15,0,247	0/0:22,4:25:2.08:0,2,342	0/1:17,0:19:0.25:53,0,0	0/1:19,0:17:6.71:7,0,58	1/1:17,0:17:7.96:65,8,0	0/0:20,0:18:17.46:0,17,184	0/0:25,0:25:2.67:0,3,210	1/1:10,0:10:14.65:105,15,0	1/1:8,0:7:1.43:22,1,0	0/0:15,0:15:15:0,15,163	0/1:26,2:29:54.29:54,0,409	0/0:21,3:23:0.35:0,0,437	0/0:32,1:33:11.19:0,11,492	0/0:8,0:9:4.17:0,4,109	0/1:12,0:11:9.58:10,0,89	0/1:28,1:29:37.79:38,0,244	0/0:20,0:20:21.11:0,21,181	0/0:12,0:12:2.99:0,3,24	1/1:14,0:13:2.68:11,3,0	1/1:13,0:13:2.95:22,3,0	0/0:22,0:23:24.74:0,25,411	0/0:22,0:22:18.91:0,19,367	0/1:14,4:18:0.30:0,0,307	0/0:10,0:8:13.82:0,14,140
chr10	75827934	.	CAGCAAA	C	627.27	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.954;DP=657;FS=5.317;HRun=0;HaplotypeScore=145.4153;InbreedingCoeff=0.9958;MQ=75.96;MQ0=0;MQRankSum=0.408;QD=44.81;ReadPosRankSum=-1.967;VQSLOD=2.6522;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.24:0,78,2088	0/0:15,0:15:45.15:0,45,1402	0/0:28,0:27:60.72:0,61,1510	0/0:24,0:22:46.41:0,46,1205	0/0:33,0:33:93.29:0,93,2591	0/0:17,0:17:48.16:0,48,1578	0/0:18,0:18:51.17:0,51,1590	0/0:43,0:43:99:0,108,3101	0/0:17,0:17:45.15:0,45,1414	0/0:29,0:29:81.28:0,81,2545	0/0:19,0:19:54.19:0,54,1798	0/0:20,0:20:45.14:0,45,1306	0/0:25,0:25:60.18:0,60,1900	0/0:25,0:25:69.02:0,69,2113	0/0:27,0:27:69.22:0,69,2235	0/0:28,0:28:81.28:0,81,2448	0/0:17,0:17:48.16:0,48,1590	0/0:28,0:28:75.26:0,75,2270	1/1:1,13:14:39.13:722,39,0	0/0:28,0:28:72.24:0,72,2098	0/0:18,0:18:54.19:0,54,1754	0/0:16,0:16:45.15:0,45,1513	0/0:20,0:20:54.19:0,54,1625	0/0:16,0:16:42.14:0,42,1374	0/0:35,0:35:93.29:0,93,2786	0/0:31,0:31:84.28:0,84,2578	0/0:32,0:32:87.30:0,87,2705	0/0:7,0:7:21.07:0,21,727
chr10	75827949	.	A	AAAACAAAC	778.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.437;DP=648;FS=8.367;HRun=0;HaplotypeScore=182.6753;InbreedingCoeff=0.8999;MQ=64.23;MQ0=2;MQRankSum=-4.723;QD=27.79;ReadPosRankSum=-0.540;VQSLOD=2.3674;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,11:28:20.54:870,21,0	0/0:16,0:16:27.09:0,27,687	0/0:25,0:20:12.04:0,12,247	0/0:23,0:21:16.78:0,17,401	0/0:26,0:26:45.15:0,45,1118	0/0:22,0:22:51.17:0,51,1153	0/0:21,0:21:45.14:0,45,986	0/0:40,0:40:52.47:0,52,1229	0/0:17,0:17:39.13:0,39,928	0/0:27,0:27:60.18:0,60,1395	0/0:23,0:23:45.15:0,45,1086	0/0:21,0:21:45.10:0,45,984	0/0:29,0:29:51.17:0,51,1226	0/0:24,0:24:57.19:0,57,1394	0/0:24,0:24:60.19:0,60,1447	0/0:24,0:24:54.19:0,54,1352	0/0:19,0:19:45.15:0,45,1126	0/0:23,0:23:36.12:0,36,886	0/0:16,0:17:27.07:0,27,615	0/0:23,0:23:54.17:0,54,1288	0/0:23,0:23:51.17:0,51,1239	0/0:21,0:21:45.11:0,45,1010	0/0:22,0:22:45.09:0,45,907	0/0:16,0:16:30.10:0,30,767	0/0:28,0:28:54.17:0,54,1326	0/0:29,0:29:54.18:0,54,1342	0/0:27,0:27:57.19:0,57,1397	0/0:10,0:10:8.76:0,9,519
chr10	75827991	.	AGGTGGT	A	6420.79	PASS	AB=0.952;AC=13;AF=0.232;AN=56;BaseQRankSum=12.906;DP=610;FS=2.432;HRun=0;HaplotypeScore=134.1836;InbreedingCoeff=0.8683;MQ=63.06;MQ0=0;MQRankSum=-14.253;QD=47.92;ReadPosRankSum=2.518;VQSLOD=4.7580;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:54.19:0,54,1921	0/0:11,0:11:33.11:0,33,1151	0/0:17,0:17:42.14:0,42,1199	0/1:19,1:19:35.86:36,0,1078	0/0:24,0:24:66.23:0,66,2335	0/0:26,0:26:75.26:0,75,2656	0/0:26,0:26:75.26:0,75,2674	0/0:27,0:27:72.25:0,72,2421	1/1:2,13:15:39.13:922,39,0	0/0:27,0:27:81.28:0,81,2871	0/0:20,0:20:54.17:0,54,1843	1/1:1,20:21:48.16:1134,48,0	1/1:3,25:28:69.24:1630,69,0	0/0:23,0:23:60.21:0,60,2071	0/0:22,0:22:66.23:0,66,2290	0/0:26,0:26:75.26:0,75,2652	0/0:30,0:30:90.31:0,90,3128	0/0:23,0:23:69.24:0,69,2458	0/0:22,0:22:66.23:0,66,2252	0/0:24,0:24:72.25:0,72,2560	0/0:34,0:34:93.32:0,93,3304	1/1:0,18:18:48.16:1134,48,0	1/1:1,18:19:45.15:1030,45,0	1/1:1,12:13:24.08:534,24,0	0/0:17,0:17:48.16:0,48,1702	0/0:22,0:22:66.23:0,66,2348	0/0:28,0:28:84.29:0,84,2991	0/0:1,0:1:3.01:0,3,107
chr10	75829283	.	GGGT	G	516.40	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=5.640;DP=496;FS=21.305;HRun=0;HaplotypeScore=82.8995;InbreedingCoeff=0.8905;MQ=54.96;MQ0=6;MQRankSum=-4.962;QD=19.13;ReadPosRankSum=-0.044;VQSLOD=1.3098;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:4:9.03:153,9,0	0/0:7,0:7:21.07:0,21,517	0/0:62,0:27:56.88:0,57,1643	0/0:54,0:20:33.31:0,33,869	0/0:14,0:14:42.14:0,42,985	0/0:27,0:27:69.20:0,69,1494	0/0:9,0:9:24.08:0,24,590	0/0:30,0:30:87.30:0,87,2113	1/1:0,6:4:12.04:204,12,0	0/0:17,0:17:51.18:0,51,1237	0/0:12,0:12:36.12:0,36,811	1/1:0,2:1:3.01:51,3,0	1/1:0,7:4:6.02:102,6,0	0/0:15,0:15:33.11:0,33,773	0/0:29,0:29:87.21:0,87,1942	0/0:17,0:16:42.10:0,42,911	0/0:33,0:33:84.29:0,84,2042	0/0:13,0:13:36.12:0,36,834	0/0:29,0:27:75.26:0,75,1847	0/0:17,0:17:51.08:0,51,1106	0/0:27,0:27:78.27:0,78,1884	./.	1/1:0,7:5:9.03:153,9,0	./.	0/0:14,0:14:39.13:0,39,944	0/0:14,0:13:36.12:0,36,887	0/0:18,0:17:51.13:0,51,1194	0/0:10,0:10:30.10:0,30,707
chr10	75829313	.	A	AG	244.90	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=4.727;DP=350;FS=15.386;HRun=1;HaplotypeScore=73.5269;InbreedingCoeff=0.8687;MQ=44.31;MQ0=16;MQRankSum=-4.601;QD=13.61;ReadPosRankSum=0.040;VQSLOD=1.3937;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:9:15.05:0,15,194	0/0:6,0:6:18.06:0,18,234	0/0:16,0:10:30.04:0,30,343	0/0:13,0:7:21.02:0,21,236	0/0:9,0:9:27.09:0,27,350	0/0:16,0:16:39.07:0,39,486	0/0:13,0:13:33.11:0,33,428	0/0:34,0:24:66.17:0,66,815	1/1:0,5:3:9.03:135,9,0	0/0:12,0:12:33.11:0,33,425	0/0:11,0:11:23.87:0,24,311	1/1:1,1:1:3.01:44,3,0	1/1:0,6:3:6.02:90,6,0	0/0:12,0:12:27.09:0,27,349	0/0:16,0:16:42.14:0,42,545	0/0:12,0:11:27.09:0,27,350	0/0:26,0:26:72.21:0,72,918	0/0:13,0:13:36.12:0,36,467	0/0:21,0:16:42.10:0,42,526	0/0:12,0:12:36.12:0,36,467	0/0:25,0:25:72.23:0,72,931	./.	1/1:0,5:3:8.99:108,9,0	./.	0/0:16,0:16:39.13:0,39,506	0/0:15,0:15:45.15:0,45,584	0/0:13,0:13:39.13:0,39,506	0/0:11,0:11:26.82:0,27,350
chr10	75829503	.	AC	A	9193.87	PASS	AB=0.795;AC=54;AF=0.964;AN=56;BaseQRankSum=-2.980;DP=278;FS=7.508;HRun=2;HaplotypeScore=34.7676;InbreedingCoeff=-0.0595;MQ=67.38;MQ0=0;MQRankSum=-2.972;QD=33.07;ReadPosRankSum=2.376;VQSLOD=4.0379;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:27.09:350,27,0	1/1:0,1:1:3.01:39,3,0	0/1:3,2:5:27.66:68,0,28	0/1:6,1:6:1.85:33,0,2	1/1:0,14:14:33.11:428,33,0	1/1:0,9:9:27.09:350,27,0	1/1:1,2:3:6.02:78,6,0	1/1:0,25:25:70.41:842,70,0	1/1:1,4:5:12.04:156,12,0	1/1:1,14:15:45.15:583,45,0	1/1:0,13:13:39:448,39,0	1/1:0,1:1:3.01:39,3,0	1/1:0,6:6:15.05:195,15,0	1/1:0,8:8:21.07:273,21,0	1/1:0,7:7:21.07:272,21,0	1/1:0,7:7:21.07:273,21,0	1/1:0,16:16:45.15:584,45,0	1/1:1,8:9:27.02:308,27,0	1/1:2,10:11:24.08:312,24,0	1/1:0,18:18:48.09:587,48,0	1/1:0,9:9:24.08:311,24,0	1/1:1,1:2:3.01:39,3,0	1/1:0,6:6:15.05:195,15,0	1/1:0,2:2:6.02:78,6,0	1/1:0,17:17:48.09:601,48,0	1/1:0,17:17:51.17:662,51,0	1/1:0,20:20:54.18:701,54,0	1/1:0,14:14:30.10:389,30,0
chr10	75831557	.	AAC	A	219.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.142;DP=423;FS=1.178;HRun=0;HaplotypeScore=73.7147;InbreedingCoeff=0.7045;MQ=70.08;MQ0=0;MQRankSum=0.076;QD=16.92;ReadPosRankSum=-0.364;VQSLOD=3.2798;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,12:13:21.05:312,21,0	0/0:5,0:5:15.02:0,15,188	0/0:20,0:15:2.26:0,2,528	0/0:19,0:18:28.72:0,29,622	0/0:10,0:10:27.06:0,27,430	0/0:13,0:13:39:0,39,501	0/0:20,0:20:57.81:0,58,923	0/0:20,0:20:54.10:0,54,739	0/0:17,0:17:45.12:0,45,235	0/0:7,0:7:21.05:0,21,293	0/0:6,0:6:9.12:0,9,191	0/0:20,0:20:47.70:0,48,268	0/0:8,0:8:16.31:0,16,72	0/0:17,0:17:48:0,48,607	0/0:13,0:13:38.69:0,39,614	0/0:19,0:19:51.11:0,51,883	0/0:25,0:25:72.08:0,72,1184	0/0:29,0:29:81.12:0,81,1381	0/0:18,0:18:51.15:0,51,899	0/0:14,0:14:36.07:0,36,553	0/0:15,0:15:42.55:0,43,591	0/0:13,0:13:34.39:0,34,216	0/0:16,0:16:17.22:0,17,199	0/0:15,0:15:36.32:0,36,178	0/0:14,0:14:37.10:0,37,393	0/0:11,0:11:33.08:0,33,523	0/0:24,0:24:72.12:0,72,1244	0/0:2,0:2:6:0,6,84
chr10	75831558	.	AC	A	1750.85	PASS	AB=0.955;AC=15;AF=0.268;AN=56;BaseQRankSum=11.815;DP=422;FS=40.921;HRun=8;HaplotypeScore=61.6265;InbreedingCoeff=0.8163;MQ=69.91;MQ0=0;MQRankSum=-2.419;QD=14.23;ReadPosRankSum=3.992;VQSLOD=1.0376;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:16.58:73,17,0	0/0:5,0:5:6.02:0,6,72	0/1:20,0:16:6.16:6,0,226	0/0:19,0:18:1.12:0,1,309	0/0:10,0:10:21.06:0,21,249	0/0:13,0:13:18.05:0,18,214	0/0:21,0:21:43:0,43,496	0/0:21,0:21:27.06:0,27,305	1/1:2,15:17:42.06:401,42,0	0/0:7,0:7:12.03:0,12,137	0/0:6,0:6:12.02:0,12,133	1/1:6,15:21:44.09:410,44,0	1/1:0,8:8:18.03:173,18,0	0/0:17,0:17:24.01:0,24,260	0/0:14,0:14:29.68:0,30,336	0/0:18,0:18:44.97:0,45,498	0/0:24,0:24:51.14:0,51,604	0/0:27,0:27:63.13:0,63,721	0/0:18,0:18:45.12:0,45,530	0/0:14,0:14:21.05:0,21,242	0/0:15,0:15:24.07:0,24,280	1/1:7,6:13:26.04:232,26,0	1/1:7,7:14:33.02:303,33,0	1/1:3,12:15:36.06:346,36,0	0/0:13,0:13:9.03:0,9,109	0/0:11,0:11:18.06:0,18,217	0/0:24,0:24:57.16:0,57,672	0/0:2,0:2:3.01:0,3,36
chr10	75831670	.	A	AG	4784.10	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=0.999;DP=581;FS=8.901;HRun=2;HaplotypeScore=69.5613;InbreedingCoeff=0.9713;MQ=91.38;MQ0=0;MQRankSum=-4.222;QD=39.54;ReadPosRankSum=3.064;VQSLOD=5.1204;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1396	0/0:5,0:5:15.05:0,15,186	0/0:26,0:26:63.16:0,63,754	0/0:27,0:27:68.78:0,69,749	0/0:21,0:21:60.19:0,60,742	0/0:21,0:21:60.19:0,60,743	0/0:22,0:22:54.17:0,54,669	0/0:23,0:23:69.17:0,69,821	1/1:2,17:19:51.17:732,51,0	0/0:19,0:19:51.16:0,51,632	0/0:14,0:14:42.13:0,42,520	1/1:1,22:23:66.22:943,66,0	1/1:1,18:19:48.63:690,49,0	0/0:19,0:19:48.15:0,48,595	0/0:15,0:15:42.13:0,42,520	0/0:15,1:16:4.93:0,5,489	0/0:21,0:21:60.19:0,60,740	0/0:19,0:19:54.17:0,54,668	0/0:17,0:17:51.16:0,51,632	0/0:19,0:19:57.17:0,57,694	0/0:55,0:55:99:0,150,1859	1/1:0,17:17:45.15:648,45,0	1/1:1,18:19:51.17:734,51,0	1/1:0,24:24:72.24:1037,72,0	0/0:13,0:13:39.12:0,39,483	0/0:15,0:15:42.13:0,42,520	0/0:24,0:24:66.21:0,66,818	0/0:10,0:10:30.09:0,30,372
chr10	75832544	.	TTATTTGTG	T	1639.48	PASS	AB=0.500;AC=9;AF=0.161;AN=56;BaseQRankSum=0.820;DP=617;FS=6.925;HRun=0;HaplotypeScore=141.5483;InbreedingCoeff=0.8328;MQ=66.77;MQ0=7;MQRankSum=-1.904;QD=14.77;ReadPosRankSum=2.218;VQSLOD=2.4099;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:60.20:0,60,1267	0/0:6,0:6:18.03:0,18,394	0/0:21,0:11:33.08:0,33,581	0/0:24,0:19:48.04:0,48,637	0/0:16,0:16:45.15:0,45,1010	0/0:22,0:22:58.67:0,59,1216	0/0:25,0:24:66.21:0,66,1528	0/0:32,0:32:96.30:0,96,1635	1/1:0,21:22:6.02:172,6,0	0/0:32,0:32:93.31:0,93,1864	0/0:15,0:15:42.14:0,42,1109	1/1:18,0:18:41.20:726,41,0	1/1:22,0:22:51.17:815,51,0	0/0:34,0:34:97.58:0,98,2207	0/0:24,0:24:66.22:0,66,1565	0/0:23,0:23:69.22:0,69,1563	0/0:29,0:28:84.29:0,84,2292	0/0:17,0:17:42.14:0,42,1312	0/0:21,0:21:62.69:0,63,1043	0/0:15,0:15:36.12:0,36,708	0/0:42,0:42:99:0,108,2363	0/0:1,11:12:0:0,0,0	0/1:0,14:13:0.48:0,0,1	1/1:1,33:35:3:69,3,0	0/0:19,0:18:43.70:0,44,1142	0/0:20,0:20:60.21:0,60,1353	0/0:27,0:27:76.49:0,76,1567	0/0:5,0:5:12.04:0,12,200
chr10	75832548	.	T	TTG	397.51	PASS	AB=1.000;AC=18;AF=0.375;AN=48;BaseQRankSum=-0.092;DP=690;FS=7.243;HRun=0;HaplotypeScore=118.2138;InbreedingCoeff=0.5402;MQ=64.28;MQ0=11;MQRankSum=0.687;QD=1.54;ReadPosRankSum=-3.680;VQSLOD=0.6229;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:33:5.53:0,6,31	0/1:10,0:10:0:0,0,0	./.	./.	0/0:20,0:19:0.45:0,0,25	0/0:21,0:21:8.58:0,9,74	0/0:25,0:25:11.81:0,12,100	1/1:36,0:35:1.25:3,1,0	0/0:24,0:24:4.09:0,4,17	0/0:33,0:33:2.94:0,3,32	0/0:21,0:21:8.98:0,9,74	0/1:17,0:17:0:0,0,0	./.	0/0:36,0:38:11.78:0,12,90	0/0:24,0:24:9.95:0,10,90	0/0:26,0:26:5.91:0,6,64	0/0:36,0:35:20.76:0,21,215	0/0:18,0:18:14.87:0,15,141	1/1:23,0:23:9.47:94,9,0	1/1:14,6:20:8.97:105,9,0	1/1:50,1:51:9.01:126,9,0	./.	0/1:14,0:13:0.24:0,0,0	0/0:36,0:36:2.74:0,3,14	0/1:22,0:20:2.77:3,0,43	1/1:21,4:27:9.46:96,9,0	1/1:32,0:32:9.06:94,9,0	1/1:6,0:6:2.96:19,3,0
chr10	75835633	.	G	GAAGAAAAAA	1500.26	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=1.683;DP=485;FS=4.294;HRun=0;HaplotypeScore=131.6012;InbreedingCoeff=0.8636;MQ=69.39;MQ0=2;MQRankSum=-2.484;QD=27.78;ReadPosRankSum=-2.185;VQSLOD=3.0042;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:80.46:0,80,2139	0/0:6,0:6:15.04:0,15,351	0/0:27,0:16:25.74:0,26,472	0/0:20,0:18:20.91:0,21,554	0/0:21,0:20:54.03:0,54,1249	0/0:14,0:14:30.08:0,30,743	0/0:17,0:17:42.06:0,42,732	0/0:26,0:26:54:0,54,868	1/1:0,5:5:9.03:350,9,0	0/0:26,0:26:75.20:0,75,1777	0/0:17,0:17:45.12:0,45,1059	1/1:2,4:8:3.01:139,3,0	1/1:8,0:8:3.48:110,3,0	0/0:10,0:10:30.05:0,30,644	0/0:14,0:14:36.04:0,36,620	0/0:12,0:12:33.10:0,33,812	0/0:32,0:32:72.11:0,72,1659	0/0:16,0:16:28.29:0,28,898	0/0:13,0:12:33.10:0,33,687	0/0:8,0:8:24.08:0,24,664	0/0:26,0:26:54.64:0,55,1557	1/1:1,8:10:17.93:378,18,0	1/1:0,7:7:9.03:407,9,0	1/1:6,8:14:4.41:275,4,0	0/0:14,0:14:30.03:0,30,683	0/0:27,0:27:74.60:0,75,1795	0/0:21,0:20:48.03:0,48,1086	0/0:20,0:20:57.20:0,57,1525
chr10	75835675	.	G	GGTGT	311.97	PASS	AB=0.947;AC=17;AF=0.405;AN=42;BaseQRankSum=0.697;DP=510;FS=6.888;HRun=0;HaplotypeScore=106.7283;InbreedingCoeff=0.3380;MQ=60.52;MQ0=15;MQRankSum=1.472;QD=1.29;ReadPosRankSum=-0.631;VQSLOD=1.5714;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,10:35:13.39:64,0,13	./.	0/1:25,0:16:0:0,0,0	./.	0/0:16,0:17:3.01:0,3,45	0/0:15,0:16:11.74:0,12,96	1/1:22,0:21:4.22:24,4,0	./.	./.	0/1:29,0:29:32.52:33,0,39	./.	1/1:20,0:19:5.96:85,6,0	1/1:11,0:10:3.01:50,3,0	0/0:10,0:12:6.01:0,6,56	1/1:15,0:15:2.98:21,3,0	0/0:15,0:15:21.01:0,21,255	0/0:20,0:20:8.99:0,9,77	0/0:15,0:13:6.02:0,6,87	./.	0/0:9,0:7:2.98:0,3,21	0/0:35,0:36:8.97:0,9,93	0/1:14,0:14:0:0,0,0	./.	1/1:20,0:19:7.96:127,8,0	0/0:12,0:14:12.02:0,12,160	1/1:30,0:29:4.53:32,5,0	0/1:19,0:19:9.88:10,0,149	0/0:15,0:14:6.01:0,6,75
chr10	75835694	.	G	GTGTGTGTGTATGTA	711.28	PASS	AB=0.792;AC=8;AF=0.148;AN=54;BaseQRankSum=4.916;DP=488;FS=9.302;HRun=0;HaplotypeScore=169.9418;InbreedingCoeff=0.6006;MQ=49.29;MQ0=26;MQRankSum=-0.063;QD=7.65;ReadPosRankSum=-1.054;VQSLOD=1.7252;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:35.40:0,35,440	0/0:7,0:7:18.03:0,18,236	0/0:13,0:6:5.93:0,6,62	0/0:18,0:10:9.02:0,9,110	0/0:20,0:19:21.07:0,21,413	0/0:17,0:16:22.31:0,22,439	0/0:19,0:19:24.84:0,25,531	0/1:20,0:18:11.12:11,0,212	1/1:12,0:12:12.04:178,12,0	0/0:22,0:22:54:0,54,933	0/0:11,0:11:15.05:0,15,249	1/1:19,0:18:12.28:208,12,0	0/1:4,8:13:22.73:198,0,23	0/0:18,0:17:36.12:0,36,698	0/0:16,0:15:26.25:0,26,392	0/0:13,0:13:33.11:0,33,870	0/0:22,0:20:48.12:0,48,796	0/0:13,0:9:24.05:0,24,412	0/0:9,0:7:18.04:0,18,252	0/0:6,0:4:9.02:0,9,134	0/0:33,0:33:72.19:0,72,1239	./.	0/0:6,0:5:3:0,3,25	1/1:28,0:27:17.71:261,18,0	0/0:15,0:14:26.23:0,26,624	0/0:32,0:29:54.15:0,54,809	0/0:20,0:19:41.74:0,42,876	0/0:17,0:16:29.93:0,30,464
chr10	75836070	.	AAGGCAGGCAGGC	A	794.99	PASS	AB=0.903;AC=7;AF=0.184;AN=38;BaseQRankSum=4.160;DP=396;FS=19.758;HRun=0;HaplotypeScore=125.4741;InbreedingCoeff=0.5237;MQ=57.30;MQ0=3;MQRankSum=-4.677;QD=8.64;ReadPosRankSum=1.951;VQSLOD=1.1986;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:18:3.01:0,3,53	./.	./.	./.	0/0:2,0:2:3.01:0,3,163	0/0:11,0:11:6.02:0,6,345	0/0:24,0:24:18.06:0,18,874	./.	1/1:13,5:18:12.04:407,12,0	./.	./.	1/1:18,6:24:9.03:305,9,0	1/1:20,2:22:2.92:102,3,0	0/0:27,0:27:24.08:0,24,1158	0/0:20,0:20:18.03:0,18,742	0/0:10,0:10:24.08:0,24,1319	0/0:26,0:25:18.06:0,18,1040	0/0:25,0:25:27.09:0,27,1551	0/0:12,0:10:9.03:0,9,429	./.	0/0:21,0:20:6.02:0,6,278	./.	./.	0/1:25,3:27:0.02:97,0,0	0/0:5,0:5:3.01:0,3,174	0/0:6,0:6:3.01:0,3,174	0/0:10,0:10:9.03:0,9,519	0/0:4,0:4:3.01:0,3,171
chr10	75836489	.	G	GTTCCCATCTATATTGTACAAGGA	29034.86	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.073;DP=707;FS=19.123;HRun=0;HaplotypeScore=393.3200;InbreedingCoeff=0.9999;MQ=82.63;MQ0=0;MQRankSum=-17.121;QD=204.47;ReadPosRankSum=0.043;VQSLOD=4.2711;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,6903	0/0:11,0:11:33.10:0,33,1687	0/0:23,0:23:51.17:0,51,2047	0/0:26,0:26:72.18:0,72,2961	0/0:31,0:31:93.32:0,93,4913	0/0:30,0:30:84.27:0,84,4778	0/0:18,0:18:51.15:0,51,2318	0/0:34,0:34:84.28:0,84,4143	1/1:19,4:24:60.21:5129,60,0	0/0:27,0:27:81.27:0,81,4374	0/0:23,0:23:66.23:0,66,3892	1/1:21,8:31:84.25:6409,84,0	1/1:17,3:20:60.16:4092,60,0	0/0:19,0:19:51.18:0,51,2814	0/0:24,0:24:69.24:0,69,3505	0/0:17,0:17:51.18:0,51,2742	0/0:31,0:31:90.29:0,90,5034	0/0:25,0:25:75.23:0,75,3815	0/0:22,0:22:63.22:0,63,3660	0/0:21,0:21:63.19:0,63,3448	0/0:39,0:39:99:0,111,6328	1/1:20,5:26:72.25:6357,72,0	1/1:14,4:20:51.18:4039,51,0	1/1:16,3:20:39.20:3009,39,0	0/0:15,0:15:39.13:0,39,2264	0/0:35,0:35:96.33:0,96,5716	0/0:35,0:35:99:0,99,5211	0/0:17,0:17:51.18:0,51,3144
chr10	75837989	.	GTT	G	1939.95	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.968;DP=522;FS=9.093;HRun=12;HaplotypeScore=71.6454;InbreedingCoeff=0.9917;MQ=68.25;MQ0=3;MQRankSum=1.030;QD=21.09;ReadPosRankSum=3.383;VQSLOD=2.5806;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:68.72:0,69,992	0/0:12,0:13:29.58:0,30,391	0/0:28,0:15:13.11:0,13,276	0/0:16,0:11:19.67:0,20,174	0/0:10,0:10:27.09:0,27,402	0/0:15,0:16:47.64:0,48,661	0/0:14,0:16:44.15:0,44,587	0/0:28,0:28:69.21:0,69,972	1/1:0,9:9:24.05:244,24,0	0/0:22,0:23:60.17:0,60,825	0/0:17,2:19:23.66:0,24,693	1/1:1,10:12:21.03:214,21,0	1/1:1,17:18:42.09:427,42,0	0/0:22,0:22:63.19:0,63,901	0/0:16,0:17:50.66:0,51,711	0/0:17,0:18:51.17:0,51,744	0/0:23,0:23:57.18:0,57,826	0/0:12,0:15:38.07:0,38,466	0/0:14,0:17:37.96:0,38,475	0/0:32,0:32:84.25:0,84,1177	0/0:14,0:14:42.12:0,42,588	1/1:9,15:24:53.75:526,54,0	1/1:2,13:16:36.26:392,36,0	1/1:3,10:13:33.03:325,33,0	0/0:23,0:24:65.70:0,66,931	0/0:23,0:23:58.06:0,58,816	0/0:18,0:18:48.14:0,48,677	0/0:12,0:12:33.10:0,33,472
chr10	75841378	.	GTGA	G	6495.20	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.508;DP=679;FS=7.018;HRun=0;HaplotypeScore=102.5590;InbreedingCoeff=0.9973;MQ=70.45;MQ0=0;MQRankSum=-1.982;QD=41.11;ReadPosRankSum=3.762;VQSLOD=6.1617;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:60.21:999,60,0	0/0:11,0:11:33.11:0,33,722	0/0:20,0:19:54.19:0,54,1164	0/0:23,0:22:15.69:0,16,928	0/0:29,0:29:84.29:0,84,1851	0/0:21,0:21:63.22:0,63,1428	0/0:10,0:10:30.10:0,30,680	0/0:27,0:27:78.26:0,78,1728	1/1:3,28:31:75.08:1248,75,0	0/0:29,0:29:81.27:0,81,1796	0/0:16,0:16:42.14:0,42,931	1/1:1,18:19:51.17:849,51,0	1/1:2,19:21:54.66:900,55,0	0/0:40,0:40:99:0,120,2654	0/0:24,0:24:72.25:0,72,1631	0/0:28,0:28:84.27:0,84,1858	0/0:28,0:28:75.23:0,75,1654	0/0:15,0:15:45.15:0,45,1020	0/0:21,0:21:54.19:0,54,1183	0/0:31,0:31:93.32:0,93,2099	0/0:34,0:34:99:0,99,2200	1/1:0,14:14:36.12:600,36,0	1/1:0,18:18:45.15:749,45,0	1/1:1,29:30:69.24:1149,69,0	0/0:21,0:21:63.21:0,63,1383	0/0:30,0:30:87.28:0,87,1928	0/0:35,0:34:99:0,105,2237	0/0:28,0:28:84.25:0,84,1814
chr10	75844263	.	AGTGTGTGT	A	4797.71	PASS	AB=0.647;AC=13;AF=0.232;AN=56;BaseQRankSum=11.365;DP=627;FS=0.000;HRun=0;HaplotypeScore=170.1060;InbreedingCoeff=0.8302;MQ=62.41;MQ0=12;MQRankSum=-10.448;QD=29.80;ReadPosRankSum=2.902;VQSLOD=4.6028;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:17:15.05:279,15,0	0/0:5,0:12:24.06:0,24,606	0/0:18,0:8:6.02:0,6,77	0/0:27,0:19:3.47:0,3,27	0/0:20,0:20:39.13:0,39,1480	0/0:26,0:26:24.06:0,24,725	0/0:18,0:17:30.10:0,30,1038	0/0:40,0:40:24.08:0,24,823	1/1:9,15:24:36.12:839,36,0	0/0:23,0:25:45.56:0,46,1197	0/0:21,0:20:30.10:0,30,1014	0/1:10,12:22:20.76:864,0,21	1/1:12,12:23:30.10:753,30,0	0/0:24,0:24:42.14:0,42,1508	0/0:33,0:35:39.13:0,39,1375	0/0:17,0:20:27.09:0,27,973	0/0:16,0:18:39.13:0,39,1326	0/0:15,0:16:21.07:0,21,700	0/0:9,0:9:9.49:0,9,151	0/0:14,0:20:27.09:0,27,940	0/0:32,0:36:33.11:0,33,1123	1/1:13,13:27:39.13:953,39,0	1/1:10,12:22:33.11:809,33,0	1/1:18,6:24:12.51:302,13,0	0/0:20,0:19:33.11:0,33,1008	0/0:17,0:17:25.86:0,26,766	0/0:22,0:24:48.09:0,48,1329	0/0:17,0:19:15.03:0,15,378
chr10	75846154	.	A	AGTGT	1341.77	PASS	AB=1.000;AC=22;AF=0.423;AN=52;BaseQRankSum=4.538;DP=811;FS=1.194;HRun=0;HaplotypeScore=168.9487;InbreedingCoeff=0.4977;MQ=55.89;MQ0=17;MQRankSum=-1.573;QD=3.43;ReadPosRankSum=-3.491;VQSLOD=2.0516;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:36:2.98:0,3,22	0/0:6,0:9:15.04:0,15,192	./.	./.	0/0:22,0:25:8.42:0,8,203	0/0:28,0:28:12.41:0,12,130	0/1:36,0:36:6.49:6,0,233	0/0:40,0:38:4.24:0,4,92	1/1:25,0:24:19.42:199,19,0	1/1:20,12:30:5.30:400,5,0	1/1:21,1:22:11.63:189,12,0	1/1:22,6:30:2.61:33,3,0	1/1:30,1:30:29.48:388,29,0	0/0:23,0:23:18.01:0,18,253	0/0:29,0:29:27.25:0,27,405	0/0:29,0:31:38.48:0,38,525	0/0:31,0:30:14.36:0,14,512	0/0:29,0:28:31.12:0,31,547	0/0:28,0:26:2.58:0,3,183	0/0:24,0:27:27.94:0,28,354	0/1:54,0:53:25.17:25,0,354	1/1:25,0:23:14.95:150,15,0	1/1:25,0:24:5.36:65,5,0	1/1:36,0:36:0.47:1,0,0	1/1:13,0:23:8.23:37,8,0	0/1:29,0:30:13.71:14,0,149	0/0:23,0:23:29.64:0,30,403	0/1:20,0:18:9.89:10,0,272
chr10	75846156	.	T	TGTGTGTGTGA	2141.81	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=6.094;DP=818;FS=18.617;HRun=0;HaplotypeScore=251.3742;InbreedingCoeff=0.8116;MQ=54.98;MQ0=18;MQRankSum=-0.550;QD=10.40;ReadPosRankSum=-0.688;VQSLOD=0.7116;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:35.54:0,36,264	0/0:9,0:9:15.55:0,16,385	0/0:27,0:15:21.05:0,21,224	0/0:29,0:16:18.04:0,18,190	0/0:26,0:26:63.57:0,64,629	0/0:28,0:28:44.07:0,44,585	0/0:37,0:37:22.49:0,22,824	0/0:40,0:38:25.97:0,26,527	1/1:24,0:24:47.18:684,47,0	0/1:31,0:28:38.70:39,0,282	0/0:22,0:22:11.26:0,11,204	1/1:29,0:29:22.33:300,22,0	1/1:30,0:29:35.75:834,36,0	0/0:23,0:23:56.67:0,57,715	0/0:30,0:29:68.89:0,69,901	0/0:30,0:30:48.42:0,48,1119	0/0:32,0:30:20.01:0,20,1063	0/0:31,0:30:61.09:0,61,1155	0/0:27,0:25:52.28:0,52,589	0/0:28,0:28:65.88:0,66,984	0/0:56,0:55:99:0,100,1220	1/1:26,0:24:23.39:280,23,0	1/1:5,17:23:2.82:57,3,0	1/1:7,31:41:5.90:125,6,0	0/0:25,0:24:32.44:0,32,314	0/0:32,0:32:36.99:0,37,781	0/0:23,0:23:47.70:0,48,806	0/0:20,0:18:7.32:0,7,559
chr10	75846405	.	CCAGGATTGT	C	5225.83	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.554;DP=536;FS=0.000;HRun=0;HaplotypeScore=151.4549;InbreedingCoeff=0.9626;MQ=86.39;MQ0=0;MQRankSum=-12.329;QD=52.26;ReadPosRankSum=2.359;VQSLOD=4.7328;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:24.08:703,24,0	0/0:8,0:8:21.07:0,21,994	0/0:19,0:19:51.17:0,51,1903	0/0:25,0:25:63.21:0,63,2347	0/0:20,0:20:57.20:0,57,2475	0/0:24,0:24:72.25:0,72,3350	0/0:18,0:18:51.18:0,51,2302	0/0:35,0:35:81.27:0,81,3521	1/1:5,17:22:51.17:1446,51,0	0/0:24,0:24:60.21:0,60,2710	0/0:11,0:11:33.11:0,33,1480	1/1:2,11:13:30.10:879,30,0	1/1:2,5:7:15.05:439,15,0	0/0:23,0:23:63.20:0,63,2734	0/0:18,0:18:54.17:0,54,2285	0/0:22,0:22:66.23:0,66,2892	0/0:21,0:21:57.20:0,57,2693	0/0:17,0:17:48.16:0,48,2272	0/0:17,0:17:51.17:0,51,2037	0/0:28,0:28:75.26:0,75,3433	0/0:34,0:34:81.28:0,81,3682	1/1:2,14:16:36.12:1055,36,0	1/1:3,9:12:21.07:615,21,0	1/1:7,4:11:3.01:88,3,0	0/0:20,0:20:57.20:0,57,2697	0/0:26,0:26:72.25:0,72,3225	0/0:15,0:15:39.13:0,39,1762	0/0:11,0:11:33.11:0,33,1543
chr10	75846406	.	CAGGATTGT	C	2833.60	PASS	AB=0.938;AC=7;AF=0.125;AN=56;BaseQRankSum=12.253;DP=539;FS=0.000;HRun=0;HaplotypeScore=148.1081;InbreedingCoeff=-0.1377;MQ=85.61;MQ0=0;MQRankSum=-11.946;QD=29.21;ReadPosRankSum=3.703;VQSLOD=2.8730;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,8:18:99:472,0,158	0/0:9,0:9:27.09:0,27,1146	0/0:18,0:18:54.18:0,54,1981	0/0:25,0:25:75.23:0,75,2650	0/0:22,0:22:66.23:0,66,2838	0/0:24,0:24:72.25:0,72,3332	0/0:18,0:18:54.18:0,54,2326	0/0:35,0:35:99:0,102,3858	0/1:20,0:20:47.64:811,0,48	0/0:25,0:25:75.25:0,75,3002	0/0:12,0:12:36.12:0,36,1607	0/1:13,0:13:35.29:484,0,35	0/1:6,0:7:17.93:243,0,18	0/0:23,0:23:69.23:0,69,2874	0/0:18,0:18:54.19:0,54,2367	0/0:22,0:22:66.23:0,66,2976	0/0:21,0:21:63.21:0,63,2710	0/0:17,0:17:51.17:0,51,2259	0/0:18,0:18:54.19:0,54,2340	0/0:28,0:28:84.29:0,84,3522	0/0:33,0:33:99:0,99,3894	0/1:16,0:16:29.87:582,0,30	0/1:12,0:12:77.76:334,0,78	0/1:11,0:11:39.94:40,0,96	0/0:21,0:21:63.22:0,63,2812	0/0:27,0:27:81.27:0,81,3498	0/0:15,0:15:45.15:0,45,1858	0/0:11,0:11:33.11:0,33,1528
chr10	75847810	.	T	TA	7007.82	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-13.842;DP=670;FS=1.082;HRun=0;HaplotypeScore=65.3372;InbreedingCoeff=0.9999;MQ=85.97;MQ0=0;MQRankSum=-7.009;QD=42.73;ReadPosRankSum=2.770;VQSLOD=5.4927;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:80.45:1293,80,0	0/0:15,0:15:45.15:0,45,629	0/0:21,0:21:53.94:0,54,659	0/0:32,0:33:87.46:0,87,1056	0/0:28,0:28:84.28:0,84,1169	0/0:17,0:17:51.17:0,51,713	0/0:21,0:21:63.20:0,63,864	0/0:34,0:34:96.30:0,96,1287	1/1:1,22:23:38.33:934,38,0	0/0:22,0:22:66.22:0,66,919	0/0:33,0:33:99:0,99,1368	1/1:0,19:19:51.07:815,51,0	1/1:1,24:26:75.26:1190,75,0	0/0:22,0:22:66.22:0,66,916	0/0:21,0:21:63.21:0,63,881	0/0:25,1:26:30.29:0,30,1001	0/0:28,0:28:81.20:0,81,1060	0/0:16,0:16:48.13:0,48,635	0/0:16,0:16:48.16:0,48,671	0/0:32,0:32:96.28:0,96,1320	0/0:26,0:26:78.26:0,78,1091	1/1:2,24:26:72.25:1146,72,0	1/1:0,19:19:54.18:863,54,0	1/1:1,17:18:48.16:767,48,0	0/0:20,0:20:57.15:0,57,744	0/0:32,0:32:96.31:0,96,1327	0/0:28,0:28:84.28:0,84,1174	0/0:15,0:14:42.14:0,42,587
chr10	75849269	.	T	TA	572.28	PASS	AB=0.900;AC=3;AF=0.054;AN=56;BaseQRankSum=-5.809;DP=655;FS=2.602;HRun=11;HaplotypeScore=67.2181;InbreedingCoeff=0.5847;MQ=70.99;MQ0=0;MQRankSum=2.191;QD=12.44;ReadPosRankSum=-0.640;VQSLOD=3.4267;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,28:37:40.20:666,40,0	0/1:8,1:9:6.54:7,0,137	0/0:16,0:16:9.33:0,9,55	0/0:9,0:9:2.93:0,3,20	0/0:42,0:43:99:0,116,886	0/0:21,0:21:53.77:0,54,414	0/0:23,0:23:56.76:0,57,441	0/0:26,0:27:43.79:0,44,331	0/0:21,0:22:55.82:0,56,424	0/0:27,0:28:64.78:0,65,493	0/0:28,0:29:72.41:0,72,559	0/0:22,0:22:53.79:0,54,418	0/0:23,0:23:41.04:0,41,419	0/0:18,0:19:46.86:0,47,354	0/0:30,0:30:70.91:0,71,534	0/0:21,0:23:58.80:0,59,444	0/0:27,0:28:70.72:0,71,538	0/0:24,0:24:62.69:0,63,483	0/0:21,0:21:40.80:0,41,299	0/0:27,0:27:62.74:0,63,487	0/0:14,0:14:38.82:0,39,296	0/0:17,0:18:49.85:0,50,377	0/0:25,0:26:67.45:0,67,505	0/0:13,0:14:40.89:0,41,308	0/0:31,0:31:80.68:0,81,627	0/0:32,0:33:69.86:0,70,616	0/0:29,0:29:80.61:0,81,617	0/0:8,0:8:14.69:0,15,103
chr10	75849944	.	CT	C	741.24	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=4.837;DP=479;FS=0.000;HRun=8;HaplotypeScore=60.7280;InbreedingCoeff=0.9399;MQ=35.34;MQ0=54;MQRankSum=-1.803;QD=7.72;ReadPosRankSum=-0.407;VQSLOD=0.6516;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,1:18:15.05:0,15,181	0/0:11,0:9:11.16:0,11,113	./.	./.	0/0:24,0:22:39.58:0,40,457	0/0:20,0:16:24.07:0,24,289	0/0:16,0:11:23.99:0,24,248	0/0:20,0:14:36.11:0,36,435	1/1:8,0:6:9:81,9,0	0/0:23,0:21:39.07:0,39,446	0/0:16,0:15:15.03:0,15,170	1/1:10,13:20:26.46:260,26,0	1/1:10,4:11:11.74:115,12,0	0/0:11,0:10:20.65:0,21,227	0/0:16,0:14:19.30:0,19,221	0/0:8,0:8:15:0,15,164	0/0:33,0:25:33.06:0,33,324	0/0:20,0:15:35.23:0,35,361	0/0:23,0:18:36.55:0,37,419	0/0:12,0:12:14.56:0,15,130	0/0:14,0:10:15:0,15,165	1/1:12,11:21:18.01:172,18,0	1/1:7,5:10:11.59:115,12,0	1/1:10,6:12:17.98:173,18,0	0/0:26,0:23:43.03:0,43,469	0/0:26,0:25:48.06:0,48,547	0/0:20,0:18:31.32:0,31,331	0/0:16,0:12:15.86:0,16,151
chr10	75850654	.	AT	A	724.21	PASS	AB=0.831;AC=21;AF=0.375;AN=56;BaseQRankSum=7.168;DP=570;FS=1.542;HRun=15;HaplotypeScore=72.1095;InbreedingCoeff=0.1895;MQ=68.83;MQ0=0;MQRankSum=-0.065;QD=2.28;ReadPosRankSum=2.473;VQSLOD=-0.7510;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,1:24:15.61:0,16,374	0/1:5,5:10:14.54:46,0,15	0/0:20,0:13:0.54:0,1,90	0/0:19,0:17:7.12:0,7,142	0/1:19,5:24:5.57:6,0,191	0/0:24,3:29:10.91:0,11,344	0/0:22,0:22:36.82:0,37,302	0/1:28,5:35:60.88:61,0,152	1/1:2,8:11:16.81:102,17,0	0/0:25,0:26:15.80:0,16,279	0/1:13,2:17:11.49:11,0,178	1/1:4,8:14:12.87:69,13,0	1/1:8,15:23:26.72:169,27,0	0/1:17,2:20:15.21:15,0,146	0/0:20,0:21:26.01:0,26,234	0/0:17,0:17:29.93:0,30,246	0/1:19,3:23:19.01:19,0,200	0/0:7,2:10:12.43:0,12,97	0/1:11,1:13:8.11:8,0,87	0/1:18,2:23:24.54:25,0,81	0/1:23,1:24:1.65:2,0,208	0/1:11,11:22:5.86:95,0,6	1/1:13,3:18:17.75:92,18,0	1/1:2,14:17:28.62:179,29,0	0/0:24,1:26:34.30:0,34,429	0/1:20,2:22:6.03:6,0,180	0/0:24,2:26:16.65:0,17,252	0/0:8,0:12:26.52:0,27,201
chr10	75850938	.	G	GA	2740.90	PASS	AB=0.971;AC=16;AF=0.286;AN=56;BaseQRankSum=9.370;DP=611;FS=7.613;HRun=14;HaplotypeScore=91.1842;InbreedingCoeff=0.8234;MQ=57.20;MQ0=11;MQRankSum=-9.928;QD=14.28;ReadPosRankSum=-1.038;VQSLOD=3.1944;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:22,21:37:38.20:759,38,0	0/0:11,0:11:32.87:0,33,268	0/1:24,0:10:19.16:19,0,70	0/1:15,1:12:24.81:25,0,126	0/0:28,0:28:74.69:0,75,641	0/0:23,0:23:62.93:0,63,541	0/0:22,0:21:36.03:0,36,356	0/0:36,0:36:67.74:0,68,577	1/1:7,10:17:36.07:375,36,0	0/0:30,0:28:62.97:0,63,545	0/0:19,0:19:47.92:0,48,414	1/1:4,11:14:40.34:391,40,0	1/1:8,10:18:36.87:357,37,0	0/0:15,0:15:26.93:0,27,230	0/0:34,0:34:76.48:0,76,644	0/0:16,1:17:35.96:0,36,309	0/0:36,0:36:89.84:0,90,770	0/0:11,0:11:29.93:0,30,259	0/0:26,0:25:47.91:0,48,406	0/0:23,0:22:52.75:0,53,438	0/0:11,0:11:23.93:0,24,200	1/1:10,14:23:43.79:421,44,0	1/1:6,13:18:39.10:416,39,0	1/1:8,8:15:18:180,18,0	0/0:19,0:18:41.38:0,41,362	0/0:22,0:20:47.96:0,48,413	0/0:25,0:24:47.91:0,48,408	0/0:11,0:8:20.97:0,21,177
chr10	75851327	.	TTCTCTC	T	977.96	PASS	AB=0.976;AC=14;AF=0.280;AN=50;BaseQRankSum=1.816;DP=544;FS=16.309;HRun=0;HaplotypeScore=119.4961;InbreedingCoeff=0.1418;MQ=60.88;MQ0=28;MQRankSum=3.332;QD=5.20;ReadPosRankSum=1.579;VQSLOD=1.5028;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:6.02:0,6,132	1/1:8,0:7:5.95:79,6,0	./.	./.	./.	0/0:20,0:20:13.51:0,14,212	0/0:24,0:24:12.42:0,12,192	0/0:27,0:26:11.91:0,12,161	0/0:18,0:17:22.46:0,22,370	1/1:16,8:21:15.39:389,15,0	0/1:16,4:21:0.02:0,0,0	0/1:11,0:11:63.07:63,0,64	0/1:14,0:12:47.68:48,0,146	0/1:16,0:15:45.80:46,0,71	0/0:16,0:16:4.28:0,4,233	0/1:15,0:15:38.81:275,0,39	0/0:30,0:26:34.59:0,35,833	0/0:15,0:11:8.99:0,9,75	0/1:21,0:19:5.85:6,0,218	0/0:15,0:15:10.17:0,10,157	0/1:24,0:19:76.28:76,0,532	1/1:11,0:10:5.34:28,5,0	0/0:22,0:21:9.50:0,10,207	0/0:31,0:24:10.52:0,11,560	0/1:22,0:20:84.73:116,0,85	0/0:20,0:18:4.82:0,5,297	0/0:12,0:7:14.99:0,15,191	0/0:26,0:23:24:0,24,392
chr10	75851370	.	TCACACACACACACA	T	274.61	PASS	AC=4;AF=0.091;AN=44;BaseQRankSum=3.711;DP=498;FS=9.133;HRun=0;HaplotypeScore=155.0607;InbreedingCoeff=0.4013;MQ=38.64;MQ0=69;MQRankSum=-2.202;QD=9.15;ReadPosRankSum=-1.726;VQSLOD=1.8357;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:14:3.01:0,3,85	0/0:4,0:3:0.89:0,1,2	./.	./.	./.	0/0:20,0:20:11.48:0,11,592	0/0:24,0:19:4.90:0,5,177	0/0:26,0:21:6.38:0,6,51	0/0:13,4:15:2.88:0,3,15	0/0:20,0:13:3.01:0,3,135	0/0:16,0:14:3.01:0,3,143	./.	1/1:7,3:9:8.88:330,9,0	0/0:12,0:9:6.02:0,6,253	0/0:24,0:22:5.34:0,5,346	0/0:20,0:19:12.04:0,12,395	0/0:39,0:32:30.57:0,31,1215	0/0:18,0:10:12.04:0,12,392	0/0:9,0:9:15.05:0,15,400	0/0:12,0:12:6.49:0,6,343	0/0:30,0:25:12.06:0,12,445	1/1:13,4:16:3.01:39,3,0	./.	./.	0/0:21,0:17:13.68:0,14,518	0/0:20,0:16:13.86:0,14,515	0/0:20,0:12:15.52:0,16,554	0/0:17,0:10:7.84:0,8,255
chr10	75851733	.	AT	A	2245.98	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.088;DP=424;FS=6.118;HRun=1;HaplotypeScore=46.6350;InbreedingCoeff=0.9579;MQ=62.89;MQ0=2;MQRankSum=3.084;QD=23.64;ReadPosRankSum=3.689;VQSLOD=3.5536;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,34:38:92.68:711,93,0	0/0:5,0:5:15.04:0,15,200	0/0:6,0:5:15.05:0,15,190	0/0:9,0:7:10.26:0,10,145	0/0:18,0:18:53.99:0,54,693	0/0:23,0:23:56.19:0,56,866	0/0:12,0:12:33.06:0,33,407	0/0:25,0:25:75.17:0,75,935	1/1:0,9:9:21.07:293,21,0	0/0:18,0:18:54.18:0,54,790	0/0:16,0:15:45.12:0,45,617	1/1:0,16:16:36.12:501,36,0	1/1:0,7:7:18.06:251,18,0	0/0:11,0:11:30.07:0,30,371	0/0:9,0:9:27.08:0,27,371	0/0:11,1:12:27.05:0,27,313	0/0:28,0:28:78.21:0,78,1073	0/0:15,0:15:45.09:0,45,590	0/0:20,0:19:57.14:0,57,776	0/0:8,0:8:24.07:0,24,321	0/0:15,0:15:39.11:0,39,549	1/1:0,4:4:12.04:162,12,0	1/1:0,14:14:33.53:436,34,0	1/1:0,4:4:6.02:84,6,0	0/0:18,0:18:51.17:0,51,738	0/0:16,0:16:48.15:0,48,671	0/0:24,0:23:69.21:0,69,928	0/0:21,0:18:54.18:0,54,789
chr10	75851735	.	AT	A	606.69	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.221;DP=431;FS=1.362;HRun=1;HaplotypeScore=54.5018;InbreedingCoeff=0.6579;MQ=63.14;MQ0=1;MQRankSum=-0.566;QD=15.17;ReadPosRankSum=2.219;VQSLOD=3.4755;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,34:38:85.22:701,85,0	0/0:5,0:5:15.05:0,15,240	0/0:7,0:6:18.06:0,18,277	0/0:9,0:7:2.45:0,2,195	0/0:19,0:19:57.19:0,57,894	0/0:24,0:24:66.18:0,66,997	0/0:13,0:13:39.08:0,39,551	0/0:23,0:23:69.23:0,69,1054	0/0:9,0:9:16.64:0,17,59	0/0:19,0:19:57.19:0,57,902	0/0:16,0:16:45.15:0,45,719	0/0:16,0:16:32.40:0,32,134	0/0:7,0:7:15.68:0,16,62	0/0:9,0:9:24.08:0,24,363	0/0:9,0:9:27.09:0,27,432	0/0:13,0:13:27.09:0,27,402	0/0:27,0:27:75.22:0,75,1163	0/0:15,0:15:42.14:0,42,642	0/0:23,0:22:63.18:0,63,950	0/0:8,0:8:24.08:0,24,364	0/0:15,0:15:42.14:0,42,661	0/0:6,0:6:6.83:0,7,65	0/0:14,0:14:6.90:0,7,45	0/0:5,0:5:7.56:0,8,35	0/0:18,0:18:51.17:0,51,811	0/0:17,0:17:51.16:0,51,774	0/0:24,0:23:69.22:0,69,1036	0/0:21,0:18:54.18:0,54,863
chr10	75852115	.	TAC	T	647.78	PASS	AB=0.963;AC=11;AF=0.204;AN=54;BaseQRankSum=9.529;DP=667;FS=13.849;HRun=0;HaplotypeScore=108.5582;InbreedingCoeff=0.4542;MQ=61.32;MQ0=6;MQRankSum=-8.406;QD=3.43;ReadPosRankSum=1.771;VQSLOD=1.5310;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:42:14.36:16,0,14	0/0:11,0:11:30.09:0,30,464	0/1:33,1:27:18.15:18,0,704	0/0:26,0:23:58.87:0,59,798	0/0:24,1:25:48.07:0,48,709	0/0:23,1:24:19.37:0,19,845	0/0:40,0:40:99:0,99,1480	0/0:25,0:25:60.17:0,60,889	1/1:17,0:16:23.57:180,24,0	0/0:18,0:18:39.12:0,39,614	0/0:21,0:21:54.17:0,54,843	0/1:23,0:23:8.40:286,0,8	1/1:18,0:17:14.64:87,15,0	0/0:26,0:26:60.19:0,60,956	0/0:14,0:14:39.11:0,39,589	0/0:13,0:13:36.12:0,36,579	0/0:47,3:50:51.21:0,51,1855	0/0:16,0:16:48.15:0,48,764	0/1:13,3:15:97.09:97,0,424	0/0:10,0:10:30.09:0,30,461	0/0:64,2:66:98.87:0,99,2592	./.	0/1:20,0:20:4.78:47,0,5	1/1:19,0:19:5.88:75,6,0	0/0:18,0:18:54.16:0,54,849	0/0:29,1:29:37.39:0,37,1092	0/0:25,1:26:34.32:0,34,1015	0/0:6,0:6:15.02:0,15,217
chr10	75852120	.	ACACACACACGCACGCACG	A	4297.61	PASS	AB=0.767;AC=12;AF=0.214;AN=56;BaseQRankSum=9.876;DP=681;FS=10.093;HRun=0;HaplotypeScore=280.9495;InbreedingCoeff=0.6099;MQ=57.65;MQ0=7;MQRankSum=-9.921;QD=22.86;ReadPosRankSum=1.199;VQSLOD=1.9605;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:42:1.94:582,0,2	0/0:10,0:10:30.10:0,30,1496	0/0:32,0:23:22.67:0,23,1453	0/0:27,0:23:63.11:0,63,1707	0/0:22,0:22:48.11:0,48,2372	0/0:22,0:22:60.21:0,60,4061	0/0:38,0:38:99:0,99,5052	0/0:24,0:24:63.21:0,63,2169	1/1:2,15:16:24.08:1025,24,0	0/0:16,0:16:42.14:0,42,1805	0/0:19,0:19:54.18:0,54,3527	0/1:1,25:26:76.17:1459,0,76	1/1:3,18:20:14.18:756,14,0	0/0:25,0:25:60.21:0,60,3696	0/0:14,0:14:39.11:0,39,2006	0/0:14,0:14:39.13:0,39,2223	0/0:51,0:51:99:0,133,7426	0/0:19,0:19:57.20:0,57,3950	0/1:16,0:15:21.40:21,0,956	0/0:10,0:10:30.10:0,30,1917	0/0:65,0:65:99:0,178,10184	1/1:5,14:19:3.01:71,3,0	0/1:5,19:24:0.73:269,0,1	1/1:3,20:23:6.02:115,6,0	0/0:19,0:19:57.17:0,57,3471	0/0:31,0:30:84.14:0,84,4940	0/0:28,0:28:78.25:0,78,3986	0/0:7,0:7:18.06:0,18,1051
chr10	75852126	.	ACACGCACGCACGCACACACGCACG	A	1678.82	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=8.568;DP=673;FS=0.748;HRun=0;HaplotypeScore=351.5092;InbreedingCoeff=0.4462;MQ=57.57;MQ0=8;MQRankSum=-8.307;QD=13.87;ReadPosRankSum=3.420;VQSLOD=1.5113;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,38:40:18.06:1041,18,0	0/0:11,0:11:33.11:0,33,1630	0/0:35,0:24:59.89:0,60,1367	0/0:29,0:23:59.88:0,60,1606	0/0:20,0:20:45.10:0,45,2907	0/0:21,0:21:60.19:0,60,4784	0/0:37,0:37:99:0,99,6057	0/0:25,0:25:69.20:0,69,2867	0/1:15,0:15:41.48:231,0,41	0/0:19,0:19:45.63:0,46,2470	0/0:19,0:19:48.15:0,48,4029	0/1:26,0:26:99:300,0,255	1/1:18,0:18:14.74:213,15,0	0/0:24,0:24:63.20:0,63,4286	0/0:14,0:14:36.11:0,36,2509	0/0:14,0:14:42.13:0,42,2861	0/0:51,0:51:99:0,136,9431	0/0:22,0:22:63.22:0,63,5442	0/0:17,0:16:33.04:0,33,1170	0/0:10,0:10:30.09:0,30,2242	0/0:67,0:67:99:0,187,13171	0/0:15,0:15:3.01:0,3,38	0/1:20,0:20:32.59:33,0,82	0/0:20,0:20:6.02:0,6,69	0/0:20,0:20:54.19:0,54,4075	0/0:29,0:28:78.21:0,78,5848	0/0:26,0:27:75.17:0,75,4542	0/0:6,0:6:18.06:0,18,1268
chr10	75852355	.	CTGTG	C	642.92	PASS	AB=0.937;AC=18;AF=0.333;AN=54;BaseQRankSum=3.541;DP=604;FS=5.998;HRun=0;HaplotypeScore=110.6134;InbreedingCoeff=0.3955;MQ=63.65;MQ0=29;MQRankSum=-0.484;QD=2.51;ReadPosRankSum=-0.500;VQSLOD=1.7856;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:30:0:0,0,0	0/1:9,0:9:26.28:26,0,193	./.	0/0:44,0:18:0:0,0,0	0/0:21,0:21:15.49:0,15,267	0/0:17,0:14:11.62:0,12,165	0/0:22,0:22:12.04:0,12,281	0/0:29,0:29:2.98:0,3,21	1/1:9,0:8:3.01:46,3,0	0/0:19,0:19:24.07:0,24,463	0/0:12,0:12:21.04:0,21,352	1/1:11,7:18:12.04:184,12,0	1/1:10,7:17:12.04:170,12,0	0/0:19,0:19:12.02:0,12,193	0/1:20,0:20:20.55:21,0,486	0/1:28,0:28:5.59:6,0,518	0/1:28,1:28:16.32:16,0,525	0/0:19,0:21:23.79:0,24,411	0/0:15,0:15:8.51:0,9,106	0/0:14,1:15:8.52:0,9,101	0/0:28,0:28:30.08:0,30,534	1/1:6,8:12:6.33:93,6,0	1/1:18,5:23:6.02:90,6,0	1/1:28,8:36:9.03:138,9,0	0/0:17,0:18:27.33:0,27,523	0/1:19,0:21:17.03:17,0,314	0/0:13,0:13:14.12:0,14,217	0/0:9,0:9:6.01:0,6,87
chr10	75852800	.	A	AT	1646.19	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=2.392;DP=385;FS=9.043;HRun=7;HaplotypeScore=53.1116;InbreedingCoeff=0.9275;MQ=65.27;MQ0=7;MQRankSum=0.070;QD=21.38;ReadPosRankSum=4.379;VQSLOD=2.9041;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,24:29:45.66:681,46,0	0/0:4,0:4:9:0,9,87	0/0:13,0:9:19.92:0,20,146	0/0:8,0:5:8.04:0,8,63	0/0:28,0:28:72.09:0,72,686	0/0:12,0:11:22.26:0,22,205	0/0:16,0:15:39.05:0,39,373	0/0:33,0:32:75.11:0,75,721	1/1:1,7:8:15.05:181,15,0	0/0:16,0:16:42.06:0,42,404	0/0:19,0:19:47.78:0,48,453	1/1:3,8:11:24.07:290,24,0	1/1:1,6:7:18.06:217,18,0	0/0:8,0:8:15:0,15,142	0/0:8,0:8:15.01:0,15,142	0/0:5,0:5:9.01:0,9,87	0/0:25,0:24:63.09:0,63,602	0/0:13,0:12:30.01:0,30,281	0/0:18,0:18:30.25:0,30,361	0/0:12,0:12:26.99:0,27,253	0/0:10,0:10:20.88:0,21,203	1/1:0,2:2:6.02:69,6,0	1/1:2,7:9:18.06:217,18,0	1/1:3,6:7:15.05:181,15,0	0/0:15,0:13:20.99:0,21,196	0/0:20,0:19:51.08:0,51,491	0/0:19,0:19:33.03:0,33,317	0/0:6,0:6:18.03:0,18,174
chr10	75853567	.	TA	T	2985.92	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=6.012;DP=481;FS=9.711;HRun=2;HaplotypeScore=71.6672;InbreedingCoeff=0.9663;MQ=75.26;MQ0=0;MQRankSum=-0.376;QD=29.27;ReadPosRankSum=-0.070;VQSLOD=2.1037;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:78.19:989,78,0	0/0:6,0:6:18.06:0,18,266	0/0:11,0:11:32.85:0,33,347	0/0:9,0:9:10.40:0,10,234	0/0:17,0:17:51.15:0,51,718	0/0:15,0:14:39.13:0,39,564	0/0:13,0:13:36.11:0,36,515	0/0:29,0:29:84.26:0,84,1190	1/1:1,13:14:30.10:389,30,0	0/0:18,0:18:54.18:0,54,783	0/0:22,0:22:66.21:0,66,957	1/1:1,15:16:42.14:544,42,0	1/1:1,18:19:51.17:660,51,0	0/0:22,0:22:63.21:0,63,930	0/0:19,0:19:57.19:0,57,843	0/0:14,0:14:42.11:0,42,599	0/0:21,0:21:63.17:0,63,905	0/0:22,0:22:66.22:0,66,972	0/0:18,0:18:51.16:0,51,735	0/0:24,0:24:69.23:0,69,1019	0/0:19,0:19:57.19:0,57,843	1/1:1,3:4:5.93:56,6,0	1/1:2,12:14:30.10:389,30,0	1/1:0,7:7:14.93:153,15,0	0/0:21,0:21:63.19:0,63,897	0/0:21,0:21:63.21:0,63,932	0/0:32,0:32:96.32:0,96,1417	0/0:6,0:6:18.06:0,18,266
chr10	75853976	.	C	CAAA	2425.10	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=3.368;DP=598;FS=10.502;HRun=10;HaplotypeScore=86.9969;InbreedingCoeff=0.8888;MQ=77.63;MQ0=2;MQRankSum=-1.317;QD=15.16;ReadPosRankSum=0.339;VQSLOD=0.6760;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:39:12.74:133,13,0	0/0:8,0:8:24.07:0,24,292	0/0:16,0:16:19.81:0,20,158	0/0:12,0:13:9:0,9,109	0/0:33,0:33:93.27:0,93,1131	0/0:27,0:28:67.62:0,68,823	0/0:20,0:20:54.13:0,54,644	0/0:29,0:31:68.96:0,69,781	1/1:3,20:26:39.07:627,39,0	0/0:32,0:33:70.39:0,70,1063	0/0:13,0:13:36.10:0,36,438	1/1:3,8:14:15.05:256,15,0	1/1:2,21:24:24.08:461,24,0	0/0:21,0:21:51.08:0,51,620	0/0:19,0:19:48.08:0,48,572	0/1:15,0:15:18.45:18,0,399	0/0:22,0:22:60.13:0,60,718	0/0:14,0:13:39.10:0,39,461	0/0:22,0:23:56.74:0,57,644	0/0:43,0:44:82.32:0,82,1221	0/0:15,0:15:39.10:0,39,474	1/1:1,11:12:24.04:404,24,0	1/1:5,9:15:18.05:331,18,0	1/1:3,9:15:24.06:392,24,0	0/0:17,0:18:51.03:0,51,586	0/0:27,0:28:75.13:0,75,893	0/0:26,0:26:66.08:0,66,802	0/0:12,0:12:30.06:0,30,365
chr10	75854229	.	G	GAC	250.78	PASS	AB=0.917;AC=4;AF=0.077;AN=52;BaseQRankSum=3.692;DP=637;FS=2.344;HRun=0;HaplotypeScore=123.7948;InbreedingCoeff=-0.1220;MQ=46.25;MQ0=25;MQRankSum=1.031;QD=2.99;ReadPosRankSum=2.127;VQSLOD=2.6899;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:12.90:0,13,110	0/0:11,0:11:20.92:0,21,226	./.	./.	0/0:20,1:20:28.92:0,29,270	0/0:24,0:23:23.43:0,23,416	0/0:28,0:24:47.75:0,48,516	0/0:38,0:37:4.01:0,4,354	0/0:23,0:23:23.41:0,23,151	0/1:24,0:23:37.61:172,0,38	0/1:13,0:13:25.45:25,0,73	0/0:21,0:21:14.59:0,15,87	0/0:12,0:10:18.39:0,18,96	0/0:23,0:23:18.95:0,19,440	0/0:34,1:33:28.24:0,28,610	0/1:13,11:26:74.05:74,0,155	0/0:19,0:17:42.03:0,42,467	0/0:21,0:18:11.56:0,12,353	0/0:25,0:22:11.16:0,11,278	0/0:23,1:23:2.44:0,2,310	0/0:63,0:60:99:0,106,1106	0/0:16,0:14:3.46:0,3,25	0/0:19,0:18:6.10:0,6,48	0/0:12,0:8:3.88:0,4,26	0/1:21,0:20:85.73:86,0,186	0/0:37,1:35:82.59:0,83,733	0/0:20,0:19:50.78:0,51,477	0/0:24,0:22:23.43:0,23,480
chr10	75854231	.	GAC	G	418.20	PASS	AB=1.000;AC=16;AF=0.308;AN=52;BaseQRankSum=9.402;DP=623;FS=0.000;HRun=0;HaplotypeScore=117.5470;InbreedingCoeff=0.7747;MQ=46.59;MQ0=23;MQRankSum=-5.476;QD=2.55;ReadPosRankSum=-2.001;VQSLOD=1.6344;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,2:27:20.22:123,20,0	0/0:11,0:11:17.92:0,18,181	./.	./.	0/0:22,0:21:12.43:0,12,273	0/0:25,0:24:19.78:0,20,433	0/0:28,0:24:47.97:0,48,439	0/0:40,0:39:23.40:0,23,270	1/1:22,0:22:20.10:112,20,0	0/0:24,0:23:39.87:0,40,449	0/1:13,0:13:11.84:12,0,119	1/1:19,1:20:14.51:83,15,0	1/1:12,0:10:20.44:121,20,0	0/0:21,0:21:35.69:0,36,462	0/0:34,0:32:42.72:0,43,647	0/0:27,0:27:31.75:0,32,348	0/0:19,0:17:41.94:0,42,431	0/1:22,0:19:2.26:2,0,265	0/0:24,0:21:29.87:0,30,259	0/0:24,0:23:26.39:0,26,340	0/0:62,0:59:27.75:0,28,949	1/1:16,0:14:3.94:26,4,0	1/1:18,1:18:12.43:96,12,0	1/1:11,0:7:2.99:23,3,0	0/0:19,0:18:27.02:0,27,313	0/0:35,0:32:33.28:0,33,510	0/0:19,1:19:50.57:0,51,461	0/0:23,0:22:41.17:0,41,550
chr10	75854233	.	CAG	C	406.35	PASS	AB=1.000;AC=7;AF=0.135;AN=52;BaseQRankSum=7.422;DP=612;FS=3.074;HRun=0;HaplotypeScore=117.7512;InbreedingCoeff=0.6500;MQ=46.51;MQ0=22;MQRankSum=-5.297;QD=4.96;ReadPosRankSum=0.289;VQSLOD=3.1607;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:28:4.58:5,0,40	0/0:10,0:10:17.70:0,18,239	./.	./.	0/0:20,0:19:29.96:0,30,445	0/0:23,0:22:45.03:0,45,667	0/0:26,0:22:45.15:0,45,699	0/0:39,0:38:99:0,103,949	1/1:8,13:21:0.39:199,0,0	0/0:26,0:25:67.72:0,68,867	0/0:13,0:13:9.03:0,9,152	1/1:11,8:19:9.92:132,10,0	1/1:6,6:10:17.26:193,17,0	0/0:21,0:21:53.21:0,53,802	0/0:35,0:33:78.91:0,79,1142	0/0:28,0:28:35.61:0,36,505	0/0:18,0:17:39.08:0,39,581	0/0:21,0:18:38.26:0,38,545	0/0:23,0:20:56.18:0,56,663	0/0:27,0:26:44.98:0,45,617	0/0:61,0:58:97.24:0,97,1575	0/0:10,6:14:3.28:0,3,24	0/0:16,2:17:6.45:0,6,48	0/0:9,2:7:0.47:0,0,1	0/0:17,0:16:24.08:0,24,393	0/0:32,0:29:78.19:0,78,1047	0/0:20,0:19:53.98:0,54,766	0/0:24,0:23:42.18:0,42,905
chr10	75854263	.	GAC	G	801.45	PASS	AB=0.729;AC=11;AF=0.196;AN=56;BaseQRankSum=8.564;DP=723;FS=2.411;HRun=0;HaplotypeScore=141.3417;InbreedingCoeff=0.7545;MQ=65.00;MQ0=18;MQRankSum=-5.502;QD=6.36;ReadPosRankSum=1.971;VQSLOD=3.1862;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:51.30:0,51,623	0/0:10,0:10:20.82:0,21,336	0/0:32,0:19:40.59:0,41,506	0/0:57,0:31:25.16:0,25,470	0/0:22,0:22:45.14:0,45,760	0/0:16,0:15:42.09:0,42,683	0/0:34,0:30:75.23:0,75,1154	0/0:34,0:33:99:0,99,1392	1/1:0,19:19:20.91:298,21,0	0/0:27,0:27:40.91:0,41,987	0/0:15,0:15:27.08:0,27,369	1/1:5,16:21:18.01:241,18,0	1/1:2,11:11:27.09:391,27,0	0/0:29,0:29:78.73:0,79,1273	0/0:32,0:32:87.07:0,87,1433	0/1:26,0:26:13.84:14,0,483	0/0:19,0:18:45.10:0,45,710	0/0:25,0:24:63:0,63,935	0/0:21,0:20:60.06:0,60,853	0/0:23,0:23:54.03:0,54,810	0/0:67,0:65:99:0,149,2457	1/1:2,10:10:0.47:1,0,0	0/1:5,10:15:0:0,0,0	0/1:6,14:16:0:0,0,0	0/0:16,0:15:18.07:0,18,446	0/0:36,0:34:98.83:0,99,1496	0/0:21,0:21:63.20:0,63,1040	0/0:26,0:26:74.79:0,75,1206
chr10	75854265	.	CAG	C	507.30	PASS	AB=0.956;AC=13;AF=0.232;AN=56;BaseQRankSum=8.620;DP=739;FS=2.312;HRun=0;HaplotypeScore=144.9049;InbreedingCoeff=0.5785;MQ=66.22;MQ0=17;MQRankSum=-5.516;QD=2.97;ReadPosRankSum=1.839;VQSLOD=2.8014;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:51.61:0,52,710	0/0:10,0:10:24.07:0,24,390	0/0:35,0:22:30.17:0,30,571	0/0:60,0:33:32.68:0,33,581	0/0:23,0:23:51.13:0,51,819	0/0:18,0:17:48.13:0,48,741	0/0:34,0:30:75.26:0,75,1220	0/0:35,0:34:99:0,102,1419	1/1:19,0:19:20.75:173,21,0	0/1:28,2:30:32.38:32,0,1000	0/0:14,1:15:27.08:0,27,396	1/1:20,0:21:16.19:128,16,0	1/1:13,0:11:26.86:232,27,0	0/0:30,0:30:79.82:0,80,1306	0/0:33,0:33:90.28:0,90,1483	0/1:24,1:25:82.74:83,0,464	0/0:19,0:18:45.13:0,45,729	0/0:25,0:24:63.14:0,63,989	0/0:21,0:20:54.10:0,54,849	0/0:23,0:23:51.17:0,51,838	0/0:69,0:67:99:0,163,2602	1/1:12,0:10:0.47:1,0,0	0/1:13,1:15:0:0,0,0	0/1:19,0:16:0:0,0,0	0/1:15,1:15:10.78:11,0,417	0/0:37,0:35:99:0,102,1525	0/0:21,0:21:63:0,63,1033	0/0:26,0:26:65.18:0,65,1139
chr10	75854731	.	TAC	T	293.93	PASS	AB=1.000;AC=10;AF=0.185;AN=54;BaseQRankSum=6.365;DP=309;FS=21.848;HRun=0;HaplotypeScore=49.0425;InbreedingCoeff=0.6966;MQ=67.05;MQ0=1;MQRankSum=-0.916;QD=7.00;ReadPosRankSum=-1.995;VQSLOD=1.0161;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,2:19:20.95:168,21,0	0/0:5,0:5:15:0,15,189	0/0:10,0:9:1.23:0,1,107	0/0:10,0:6:14.84:0,15,112	0/0:13,0:13:39.08:0,39,615	0/0:9,0:9:24.06:0,24,429	0/0:10,0:10:30.03:0,30,412	0/0:43,0:42:99:0,123,1730	1/1:6,0:6:5.95:91,6,0	0/0:13,0:12:12.05:0,12,422	0/0:7,0:7:21:0,21,240	0/1:3,0:3:9.32:19,0,9	1/1:6,0:6:9.88:77,10,0	0/0:10,0:10:29.98:0,30,333	0/0:10,0:10:27.05:0,27,410	0/0:11,0:11:17.94:0,18,334	0/0:20,0:20:59.97:0,60,916	0/0:25,0:25:44.22:0,44,1013	0/0:9,0:9:27.06:0,27,420	0/0:9,0:9:20.97:0,21,265	0/0:9,0:9:23.77:0,24,283	0/1:4,0:4:0.10:41,0,0	./.	1/1:4,0:4:5.99:48,6,0	0/0:11,0:11:9.61:0,10,388	0/0:10,0:10:30.06:0,30,432	0/0:14,0:14:38.90:0,39,498	0/0:5,0:5:15.01:0,15,197
chr10	75854765	.	TAC	T	119.78	PASS	AB=1.000;AC=9;AF=0.173;AN=52;BaseQRankSum=6.375;DP=325;FS=0.000;HRun=0;HaplotypeScore=50.3277;InbreedingCoeff=0.6398;MQ=50.80;MQ0=6;MQRankSum=-3.289;QD=4.99;ReadPosRankSum=0.482;VQSLOD=2.1602;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/1:3,0:3:8.54:9,0,99	0/0:11,0:3:2.98:0,3,22	0/0:37,0:2:6.02:0,6,66	0/0:9,0:9:26.95:0,27,333	0/0:15,0:15:42.09:0,42,654	0/0:4,0:4:12.01:0,12,165	0/0:53,0:53:99:0,137,2079	1/1:4,1:5:6:51,6,0	0/0:11,0:10:30.07:0,30,485	0/0:5,0:5:15.02:0,15,221	1/1:2,2:4:5.95:63,6,0	1/1:3,4:8:11.90:106,12,0	0/0:6,0:6:18.03:0,18,278	0/0:10,0:10:30.07:0,30,511	0/0:4,0:4:12.01:0,12,143	0/0:23,0:23:50.34:0,50,934	0/0:23,0:23:49.34:0,49,967	0/0:8,0:8:24.06:0,24,375	0/0:8,0:8:8.29:0,8,257	0/0:11,0:11:16.26:0,16,330	./.	1/1:3,1:4:3:25,3,0	0/0:1,1:2:0:0,0,0	0/0:14,0:14:39.10:0,39,625	0/0:14,0:14:36.05:0,36,452	0/0:9,0:9:24.06:0,24,398	0/0:6,0:6:18.03:0,18,280
chr10	75854773	.	TAC	T	52.03	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=4.999;DP=339;FS=0.000;HRun=0;HaplotypeScore=51.8439;InbreedingCoeff=0.6978;MQ=50.82;MQ0=7;MQRankSum=-3.491;QD=2.74;ReadPosRankSum=0.078;VQSLOD=1.5317;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:3,0:3:9.03:0,9,149	0/0:12,0:4:6.02:0,6,98	0/0:39,0:2:5.88:0,6,48	0/0:11,0:11:33.09:0,33,540	0/0:13,0:13:39.12:0,39,713	0/0:5,0:5:15.05:0,15,274	0/0:56,0:56:99:0,159,2721	1/1:4,2:6:5.89:45,6,0	0/0:12,0:11:33.11:0,33,600	0/0:6,0:6:18.06:0,18,345	1/1:3,2:5:2.28:13,2,0	1/1:7,1:8:14.66:109,15,0	0/0:6,0:6:17.89:0,18,302	0/0:11,0:11:33.10:0,33,601	0/0:6,0:6:18.06:0,18,311	0/0:21,0:21:63.22:0,63,1184	0/0:21,0:21:59.46:0,59,1142	0/0:11,0:11:30.10:0,30,517	0/0:10,0:10:27.07:0,27,446	0/0:9,0:9:23.68:0,24,458	./.	0/0:6,0:6:2.90:0,3,17	0/0:1,0:1:0:0,0,0	0/0:15,0:15:45.15:0,45,808	0/0:11,0:11:33.11:0,33,633	0/0:9,0:9:27.06:0,27,430	0/0:6,0:6:18.06:0,18,347
chr10	75854781	.	C	CAT	346.90	PASS	AB=0.545;AC=7;AF=0.140;AN=50;BaseQRankSum=5.001;DP=371;FS=2.925;HRun=0;HaplotypeScore=55.8272;InbreedingCoeff=0.6677;MQ=51.87;MQ0=6;MQRankSum=-1.052;QD=12.39;ReadPosRankSum=0.644;VQSLOD=3.1575;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:4:12.04:0,12,156	0/0:14,0:4:6.02:0,6,82	./.	0/0:11,0:11:30.10:0,30,412	0/0:13,0:13:36.10:0,36,475	0/0:7,0:7:15.03:0,15,189	0/0:55,0:55:99:0,147,1988	1/1:3,4:7:6.02:91,6,0	0/0:15,0:15:42.11:0,42,545	0/0:9,0:9:27.07:0,27,352	1/1:3,2:5:3.01:50,3,0	1/1:3,7:10:15.05:242,15,0	0/0:8,0:8:21.07:0,21,287	0/0:14,0:14:42.14:0,42,574	0/0:9,0:9:24.08:0,24,328	0/0:22,0:22:60.20:0,60,822	0/0:22,0:22:59.74:0,60,774	0/0:13,0:13:33.05:0,33,393	0/0:10,0:10:24.07:0,24,313	0/0:10,0:10:26.69:0,27,331	./.	0/1:1,5:6:12.82:90,0,13	0/0:0,1:1:0:0,0,0	0/0:17,0:17:39.13:0,39,536	0/0:14,0:14:39.12:0,39,520	0/0:12,0:12:36.09:0,36,459	0/0:6,0:6:18.06:0,18,247
chr10	75858401	.	GA	G	6475.36	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.273;DP=815;FS=0.313;HRun=2;HaplotypeScore=83.2740;InbreedingCoeff=0.9992;MQ=85.40;MQ0=0;MQRankSum=-2.974;QD=35.00;ReadPosRankSum=3.286;VQSLOD=5.2659;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,153,2233	0/0:7,0:7:21.04:0,21,289	0/0:25,0:26:71.79:0,72,1039	0/0:31,0:31:84.25:0,84,1197	0/0:25,0:25:75.25:0,75,1116	0/0:30,0:30:87.27:0,87,1258	0/0:27,0:27:78.24:0,78,1143	0/0:37,0:37:99:0,105,1573	1/1:1,35:36:63.39:1313,63,0	0/0:27,0:27:78.25:0,78,1137	0/0:13,0:13:39.12:0,39,565	1/1:0,37:37:93.17:1206,93,0	1/1:0,34:34:96.31:1245,96,0	0/0:34,0:34:93.31:0,93,1392	0/0:26,0:26:78.26:0,78,1169	0/0:42,0:42:99:0,120,1738	0/0:28,0:28:81.24:0,81,1162	0/0:23,0:23:69.21:0,69,1011	0/0:30,0:30:90.29:0,90,1311	0/0:25,0:25:75.24:0,75,1092	0/0:41,0:41:99:0,117,1753	1/1:3,21:24:60.18:764,60,0	1/1:0,25:25:69.19:895,69,0	1/1:0,29:29:81.26:1052,81,0	0/0:26,0:26:69.23:0,69,1034	0/0:32,0:32:90.30:0,90,1348	0/0:35,0:35:99:0,102,1504	0/0:14,0:14:42.08:0,42,545
chr10	75858631	.	GT	G	2453.04	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.261;DP=635;FS=4.706;HRun=1;HaplotypeScore=81.7520;InbreedingCoeff=0.9964;MQ=70.31;MQ0=4;MQRankSum=-3.615;QD=20.44;ReadPosRankSum=0.676;VQSLOD=3.7895;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1713	0/0:6,0:6:15.05:0,15,240	0/0:35,0:23:61.01:0,61,860	0/0:25,0:23:69.21:0,69,1036	0/0:19,0:19:56.85:0,57,820	0/0:25,0:25:72.24:0,72,1138	0/0:31,0:31:90.27:0,90,1363	0/0:26,0:26:78.23:0,78,1134	1/1:5,9:14:41.89:347,42,0	0/0:18,0:18:54.18:0,54,831	0/0:13,0:13:27.56:0,28,425	1/1:7,16:23:61.76:484,62,0	1/1:3,15:18:53.85:452,54,0	0/0:31,0:31:93.32:0,93,1459	0/0:28,0:28:84.27:0,84,1299	0/0:24,0:24:72.25:0,72,1134	0/0:18,0:18:54.16:0,54,820	0/0:29,0:29:84.25:0,84,1299	0/0:15,0:15:44.80:0,45,607	0/0:20,0:20:60.19:0,60,903	0/0:39,0:39:99:0,107,1572	1/1:8,9:17:41.21:336,41,0	1/1:6,8:14:39.23:294,39,0	1/1:5,29:34:86.62:728,87,0	0/0:24,0:24:72.23:0,72,1097	0/0:20,0:20:57.19:0,57,873	0/0:21,0:20:60.20:0,60,942	0/0:9,0:9:27.09:0,27,425
chr10	75858634	.	GT	G	2468.16	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.887;DP=637;FS=0.000;HRun=1;HaplotypeScore=81.2609;InbreedingCoeff=0.9963;MQ=70.75;MQ0=3;MQRankSum=-3.635;QD=20.57;ReadPosRankSum=0.788;VQSLOD=3.7028;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,1584	0/0:5,0:5:15.05:0,15,229	0/0:31,0:22:62.90:0,63,804	0/0:24,0:22:66.20:0,66,882	0/0:21,0:21:34.95:0,35,574	0/0:24,0:24:72.23:0,72,1063	0/0:31,0:31:90.24:0,90,1241	0/0:28,0:28:84.26:0,84,1164	1/1:6,9:15:44.89:374,45,0	0/0:20,0:20:59.98:0,60,801	0/0:12,0:12:27.52:0,28,360	1/1:7,16:23:51.54:480,52,0	1/1:2,15:17:50.87:429,51,0	0/0:32,0:32:96.25:0,96,1338	0/0:27,0:27:81.26:0,81,1197	0/0:27,0:27:81.25:0,81,1154	0/0:19,0:19:57.15:0,57,798	0/0:28,0:28:84.22:0,84,1195	0/0:13,0:13:33.11:0,33,470	0/0:21,0:21:62.72:0,63,808	0/0:38,0:38:80.46:0,80,1447	1/1:8,9:17:41.82:346,42,0	1/1:7,7:14:38.78:297,39,0	1/1:5,29:34:86.63:731,87,0	0/0:23,0:23:69.23:0,69,1030	0/0:21,0:21:63.19:0,63,860	0/0:23,0:22:63.16:0,63,878	0/0:9,0:9:27.09:0,27,394
chr10	75859389	.	C	CTCCT	3227.04	PASS	AB=1.000;AC=11;AF=0.220;AN=50;BaseQRankSum=6.599;DP=554;FS=28.991;HRun=0;HaplotypeScore=65.2927;InbreedingCoeff=0.7728;MQ=32.55;MQ0=232;MQRankSum=-1.543;QD=21.66;ReadPosRankSum=0.073;VQSLOD=1.5157;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:6:6.02:0,6,113	0/0:7,0:7:17.79:0,18,340	0/1:18,0:2:0.45:20,0,0	0/0:12,0:2:3.01:0,3,31	0/0:26,0:24:14.90:0,15,205	0/0:14,0:6:18.06:0,18,321	0/0:26,0:9:20.99:0,21,323	0/0:15,0:1:3.01:0,3,55	1/1:2,16:13:12.04:323,12,0	0/0:28,0:20:54.12:0,54,893	0/0:17,0:17:23.95:0,24,337	1/1:4,21:12:15.05:355,15,0	1/1:5,18:15:24.08:569,24,0	0/0:22,0:11:17.90:0,18,226	0/0:29,0:19:57.15:0,57,1020	0/0:17,0:8:24.08:0,24,453	0/0:22,0:5:6.02:0,6,113	./.	0/0:11,0:3:6.02:0,6,110	0/0:24,0:23:62.97:0,63,1019	./.	1/1:5,33:38:48.16:1170,48,0	1/1:3,20:23:39.09:954,39,0	./.	0/0:17,0:17:33.11:0,33,564	0/0:24,0:18:51.16:0,51,909	0/0:14,0:13:33.11:0,33,598	0/0:8,0:6:6.02:0,6,113
chr10	75861490	.	G	GA	11334.60	PASS	AB=0.926;AC=54;AF=0.964;AN=56;BaseQRankSum=2.629;DP=668;FS=2.384;HRun=1;HaplotypeScore=114.2880;InbreedingCoeff=-0.0371;MQ=84.19;MQ0=0;MQRankSum=-4.777;QD=16.97;ReadPosRankSum=5.763;VQSLOD=5.3691;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:86.01:591,86,0	1/1:13,0:13:35.52:233,36,0	0/1:21,0:21:35.22:250,0,35	0/1:19,4:23:32.83:285,0,33	1/1:22,0:22:62.31:426,62,0	1/1:25,0:25:47.30:437,47,0	1/1:26,0:26:67.90:433,68,0	1/1:36,0:36:47.25:509,47,0	1/1:16,0:16:47.29:306,47,0	1/1:30,0:30:87.62:515,88,0	1/1:17,0:17:41.47:278,41,0	1/1:20,0:20:27.44:286,27,0	1/1:25,0:25:71.10:473,71,0	1/1:29,0:29:82.84:555,83,0	1/1:32,0:32:85.75:560,86,0	1/1:25,0:25:73.95:489,74,0	1/1:39,0:39:97.69:641,98,0	1/1:13,0:13:35.58:243,36,0	1/1:19,0:19:52.30:318,52,0	1/1:21,0:21:56.29:376,56,0	1/1:42,0:42:99:791,101,0	1/1:18,0:18:38.53:257,39,0	1/1:18,0:18:44.28:281,44,0	1/1:16,0:16:44.37:290,44,0	1/1:21,0:21:36.26:338,36,0	1/1:35,0:35:73.06:554,73,0	1/1:24,0:24:65.29:446,65,0	1/1:9,0:9:26.64:175,27,0
chr10	75870535	.	C	CT	2665.45	PASS	AB=0.962;AC=52;AF=0.963;AN=54;BaseQRankSum=3.776;DP=123;FS=0.000;HRun=3;HaplotypeScore=107.9349;InbreedingCoeff=-0.0307;MQ=88.04;MQ0=1;MQRankSum=-1.098;QD=21.67;ReadPosRankSum=3.486;VQSLOD=2.9515;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:30.06:299,30,0	1/1:0,1:1:3:27,3,0	0/1:12,0:9:5.67:6,0,28	0/1:10,0:11:2.22:67,0,2	1/1:0,2:2:6.01:60,6,0	1/1:0,3:3:9.01:88,9,0	1/1:0,6:6:15.03:148,15,0	1/1:1,0:1:3:26,3,0	1/1:0,6:6:15.03:149,15,0	1/1:0,1:1:3.01:31,3,0	1/1:0,2:2:6.01:62,6,0	1/1:0,6:6:18.03:178,18,0	1/1:0,2:2:6.01:59,6,0	1/1:1,6:7:18.03:179,18,0	1/1:0,8:8:21.04:208,21,0	1/1:0,5:5:12.02:117,12,0	1/1:0,1:1:3:29,3,0	1/1:0,2:2:3:29,3,0	1/1:0,4:4:12.03:126,12,0	1/1:0,3:3:6.01:59,6,0	1/1:0,2:2:3:29,3,0	1/1:0,5:5:15.03:150,15,0	1/1:0,8:8:24.05:240,24,0	1/1:0,1:1:3:29,3,0	1/1:0,3:3:6.01:59,6,0	1/1:0,7:7:21.04:213,21,0	1/1:0,3:3:9.02:89,9,0	./.
chr10	75870536	.	G	GA	1100.52	PASS	AB=0.784;AC=50;AF=0.962;AN=52;BaseQRankSum=3.675;DP=117;FS=0.000;HRun=0;HaplotypeScore=117.2017;InbreedingCoeff=-0.0250;MQ=86.21;MQ0=1;MQRankSum=-0.668;QD=9.41;ReadPosRankSum=3.476;VQSLOD=3.6250;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:27.05:115,27,0	1/1:1,0:1:2.68:11,3,0	0/1:8,4:10:24.33:54,0,24	0/1:9,2:10:20.33:151,0,20	1/1:2,0:2:5.49:25,5,0	1/1:3,0:3:8.23:35,8,0	1/1:6,0:6:13.59:58,14,0	./.	1/1:5,0:5:13.59:57,14,0	1/1:1,0:1:2.60:10,3,0	1/1:2,0:2:5.49:24,5,0	1/1:6,0:6:16.47:70,16,0	1/1:2,0:2:5.42:23,5,0	1/1:7,0:7:16.40:71,16,0	1/1:7,0:7:19.21:82,19,0	1/1:4,0:4:10.85:46,11,0	1/1:1,0:1:2.68:11,3,0	1/1:2,0:2:2.50:9,2,0	1/1:3,0:3:7.49:27,7,0	1/1:2,0:2:5.36:23,5,0	1/1:2,0:2:2.74:12,3,0	1/1:5,0:5:13.66:59,14,0	1/1:8,0:8:21.89:94,22,0	1/1:1,0:1:2.80:13,3,0	1/1:3,0:3:5.49:23,5,0	1/1:7,0:7:17.67:67,18,0	1/1:3,0:3:7.94:32,8,0	./.
chr10	75875846	.	AT	A	2028.31	PASS	AB=0.863;AC=18;AF=0.321;AN=56;BaseQRankSum=11.955;DP=642;FS=2.506;HRun=12;HaplotypeScore=72.2737;InbreedingCoeff=0.6444;MQ=66.67;MQ0=1;MQRankSum=-0.545;QD=7.40;ReadPosRankSum=4.197;VQSLOD=2.5560;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:38:61.10:176,61,0	0/0:8,0:8:18.02:0,18,176	0/0:12,1:10:11.77:0,12,116	0/0:13,0:9:10.22:0,10,78	0/0:36,3:39:21.52:0,22,726	0/0:17,1:18:27.86:0,28,464	0/0:11,0:12:29.86:0,30,279	0/0:34,3:37:13.56:0,14,663	1/1:6,10:17:1.45:184,1,0	0/0:26,0:27:55.74:0,56,522	0/0:16,0:16:36.05:0,36,354	1/1:10,21:31:25.34:370,25,0	1/1:6,19:25:29.31:405,29,0	0/0:21,1:22:36.79:0,37,528	0/0:33,2:34:38.43:0,38,724	0/1:39,5:44:9:9,0,829	0/0:25,2:28:5.32:0,5,571	0/0:26,1:27:28.73:0,29,653	0/0:14,0:14:29.84:0,30,280	0/1:11,4:15:56.77:57,0,206	0/0:16,0:16:39.08:0,39,396	1/1:5,15:20:34.05:276,34,0	1/1:4,20:25:25.36:370,25,0	1/1:2,18:21:46.85:354,47,0	0/0:15,1:17:24.69:0,25,412	0/1:18,2:20:0.13:0,0,348	0/0:24,2:26:19.65:0,20,561	0/1:15,3:18:18.61:19,0,369
chr10	75876153	.	G	GA	860.44	PASS	AB=0.885;AC=3;AF=0.054;AN=56;BaseQRankSum=-5.934;DP=711;FS=13.193;HRun=10;HaplotypeScore=72.2194;InbreedingCoeff=0.6318;MQ=70.51;MQ0=0;MQRankSum=-1.925;QD=11.95;ReadPosRankSum=-0.211;VQSLOD=1.5279;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,41:49:49.80:925,50,0	0/0:7,0:7:17.96:0,18,146	0/0:19,0:18:13.53:0,14,188	0/0:26,0:23:26.98:0,27,193	0/0:39,0:39:70.03:0,70,726	0/0:24,0:24:56.41:0,56,452	0/0:26,0:26:68.92:0,69,566	0/0:22,0:22:47.91:0,48,392	0/0:17,0:17:43.35:0,43,335	0/0:21,0:21:47.94:0,48,394	0/0:21,0:21:53.59:0,54,427	0/0:31,0:31:53.70:0,54,573	0/0:35,1:37:67.43:0,67,733	0/0:23,0:23:53.93:0,54,443	0/0:23,0:23:53.90:0,54,437	0/0:38,0:39:94.92:0,95,769	0/0:45,0:46:99:0,128,1040	0/0:22,1:23:30.78:0,31,450	0/0:11,0:10:23.88:0,24,183	0/0:22,0:22:53.91:0,54,440	0/0:20,0:20:50.93:0,51,419	0/1:18,3:23:41.79:42,0,278	0/0:16,0:16:38.95:0,39,320	0/0:32,0:32:89.52:0,90,718	0/0:21,0:21:50.27:0,50,399	0/0:26,0:26:62.89:0,63,517	0/0:34,1:36:64.30:0,64,697	0/0:10,0:10:26.30:0,26,200
chr10	75876292	.	TC	T	6209.14	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.032;DP=721;FS=2.906;HRun=1;HaplotypeScore=69.2822;InbreedingCoeff=0.9994;MQ=69.80;MQ0=0;MQRankSum=-1.615;QD=37.40;ReadPosRankSum=4.132;VQSLOD=5.4138;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,154,2445	0/0:9,0:9:27.09:0,27,432	0/0:17,0:16:48.11:0,48,687	0/0:18,0:16:45.15:0,45,719	0/0:28,0:28:81.28:0,81,1285	0/0:22,0:22:66.23:0,66,1055	0/0:21,0:21:63.20:0,63,983	0/0:34,0:34:99:0,99,1540	1/1:0,22:22:57.19:797,57,0	0/0:21,0:21:63.18:0,63,976	0/0:17,0:17:51.17:0,51,810	1/1:0,34:34:87.29:1217,87,0	1/1:0,33:33:87.29:1217,87,0	0/0:26,0:26:78.27:0,78,1247	0/0:34,0:34:99:0,102,1629	0/0:33,0:33:99:0,99,1583	0/0:32,0:32:90.31:0,90,1439	0/0:25,0:25:75.17:0,75,1113	0/0:23,0:23:69.24:0,69,1102	0/0:20,0:20:60.20:0,60,955	0/0:29,0:29:87.30:0,87,1387	1/1:0,26:26:69.23:965,69,0	1/1:0,21:21:60.20:838,60,0	1/1:0,30:30:84.28:1175,84,0	0/0:21,0:21:63.20:0,63,984	0/0:31,0:31:93.32:0,93,1483	0/0:35,0:34:99:0,105,1619	0/0:8,0:8:24.08:0,24,384
chr10	75877985	.	AGAC	A	1938.86	PASS	AB=0.986;AC=24;AF=0.429;AN=56;BaseQRankSum=-2.945;DP=503;FS=5.522;HRun=0;HaplotypeScore=109.0343;InbreedingCoeff=0.2272;MQ=53.07;MQ0=10;MQRankSum=-0.658;QD=6.38;ReadPosRankSum=-8.105;VQSLOD=-0.3748;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:21:10.45:186,10,0	0/0:6,0:6:13.27:0,13,102	0/1:18,0:5:2.36:7,0,2	0/0:13,0:7:10.54:0,11,73	0/1:25,0:24:21.49:21,0,254	0/1:14,0:14:44.42:44,0,89	0/0:24,0:24:21.54:0,22,445	0/1:18,0:18:51.04:51,0,180	1/1:7,4:11:23.92:247,24,0	0/1:18,0:19:28.19:28,0,129	0/0:22,0:21:11.16:0,11,241	1/1:9,0:10:19.74:173,20,0	1/1:17,2:19:45.60:460,46,0	0/0:21,0:21:3.27:0,3,186	0/1:25,0:25:0.62:1,0,333	0/1:14,0:14:19.49:19,0,113	0/0:23,0:21:21.06:0,21,326	0/0:14,0:14:2.92:0,3,265	0/1:20,0:19:99:102,0,112	0/0:19,0:19:12.17:0,12,282	0/1:10,0:9:33.71:34,0,103	1/1:18,1:20:40.03:367,40,0	1/1:14,1:14:28.92:197,29,0	1/1:17,2:19:12.10:112,12,0	0/0:21,0:21:3.93:0,4,214	0/1:23,0:24:72.45:72,0,140	0/0:20,1:20:8.37:0,8,271	0/0:14,0:14:8.51:0,9,167
chr10	75878056	.	CAT	C	485.17	PASS	AB=0.989;AC=8;AF=0.143;AN=56;BaseQRankSum=12.338;DP=656;FS=0.000;HRun=0;HaplotypeScore=118.9567;InbreedingCoeff=0.4113;MQ=55.89;MQ0=11;MQRankSum=1.523;QD=3.73;ReadPosRankSum=3.265;VQSLOD=2.5300;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:11.73:0,12,85	0/0:9,0:9:24.03:0,24,359	0/0:36,0:18:53.04:0,53,452	0/0:34,0:18:50.97:0,51,504	0/0:27,0:27:35.89:0,36,925	0/0:19,0:19:44.53:0,45,801	0/0:32,0:32:74.38:0,74,1195	0/0:21,0:20:57.02:0,57,681	0/1:21,1:22:37.95:104,0,38	0/0:24,0:24:71.28:0,71,971	0/0:14,0:14:41.95:0,42,690	0/1:30,0:30:88.24:94,0,88	1/1:23,0:22:26.91:176,27,0	0/0:23,0:23:52.87:0,53,962	0/0:35,0:35:85.13:0,85,1596	0/0:24,0:24:35.57:0,36,896	0/0:30,1:31:80.79:0,81,1246	0/0:18,1:19:34.18:0,34,795	0/0:13,0:13:26.70:0,27,460	0/0:25,0:24:55.18:0,55,1048	0/0:44,0:44:82.70:0,83,1555	0/1:13,0:13:25.43:63,0,25	0/1:13,0:13:16.93:17,0,104	1/1:28,1:29:39.80:180,40,0	0/0:22,0:22:50.57:0,51,945	0/0:26,0:26:52.70:0,53,849	0/0:17,0:17:35.89:0,36,817	0/0:6,0:6:18.06:0,18,309
chr10	75878058	.	TAC	T	2506.20	PASS	AB=0.924;AC=18;AF=0.321;AN=56;BaseQRankSum=11.649;DP=678;FS=0.000;HRun=0;HaplotypeScore=111.2953;InbreedingCoeff=0.4292;MQ=54.73;MQ0=12;MQRankSum=1.090;QD=8.14;ReadPosRankSum=1.618;VQSLOD=3.2842;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:31:2.74:0,3,12	0/0:9,0:9:15.05:0,15,228	0/0:36,0:17:3.01:0,3,46	0/0:34,0:17:5.99:0,6,59	0/1:24,3:27:79.10:79,0,586	0/0:18,1:20:8.10:0,8,562	0/1:34,0:34:15.52:16,0,728	0/0:21,0:20:18.06:0,18,269	1/1:6,14:21:35.63:384,36,0	0/0:25,0:25:21.35:0,21,557	0/0:14,0:14:33.11:0,33,507	1/1:8,23:32:53.72:570,54,0	1/1:2,19:22:50.98:558,51,0	0/0:22,1:23:13.61:0,14,628	0/0:33,2:35:15.22:0,15,1089	0/1:21,3:24:50.98:51,0,585	0/0:31,0:31:62.84:0,63,878	0/0:19,0:19:39.60:0,40,596	0/1:11,1:12:15.99:16,0,212	0/0:26,0:27:21.32:0,21,796	0/1:45,5:50:9.70:10,0,1018	1/1:3,10:13:18.05:204,18,0	1/1:6,5:13:11.86:116,12,0	1/1:2,25:29:59.68:644,60,0	0/0:19,1:21:14.12:0,14,641	0/1:27,2:29:48.10:48,0,514	0/0:16,1:17:11.08:0,11,575	0/0:5,0:6:18.05:0,18,256
chr10	75881111	.	C	CT	1121.55	PASS	AB=0.937;AC=16;AF=0.286;AN=56;BaseQRankSum=7.923;DP=547;FS=2.652;HRun=11;HaplotypeScore=65.6767;InbreedingCoeff=0.6667;MQ=67.91;MQ0=2;MQRankSum=-1.692;QD=6.72;ReadPosRankSum=0.791;VQSLOD=1.9684;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,13:21:44.85:414,45,0	0/1:8,1:10:4.50:4,0,142	0/0:9,0:7:8.95:0,9,66	0/0:10,0:10:16.92:0,17,118	0/0:20,0:20:44.78:0,45,348	0/0:15,0:16:40.88:0,41,307	0/0:16,0:16:3.21:0,3,203	0/0:31,1:32:40.26:0,40,482	1/1:13,0:14:21.82:132,22,0	0/0:26,0:27:67.77:0,68,516	0/0:18,0:20:46.85:0,47,354	1/1:20,0:19:25.63:137,26,0	0/1:20,0:19:17.66:186,0,18	0/0:17,0:17:35.81:0,36,279	0/0:24,0:24:62.74:0,63,485	0/0:23,0:25:42.51:0,43,387	0/0:22,0:22:59.77:0,60,464	0/0:27,0:29:56.10:0,56,409	0/0:24,0:26:54.64:0,55,405	0/1:22,2:24:6.40:6,0,309	0/0:15,0:15:38.84:0,39,302	1/1:9,0:9:16.95:83,17,0	1/1:23,0:23:13.83:196,14,0	1/1:13,0:13:25.92:147,26,0	0/1:10,1:11:3.57:4,0,156	0/0:20,0:20:35.75:0,36,279	0/0:32,0:34:80.77:0,81,598	0/0:16,0:16:32.74:0,33,293
chr10	75881122	.	T	TC	2377.04	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=-0.479;DP=542;FS=2.624;HRun=1;HaplotypeScore=53.7964;InbreedingCoeff=0.8239;MQ=64.53;MQ0=2;MQRankSum=0.029;QD=17.22;ReadPosRankSum=0.898;VQSLOD=3.9396;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:22:42.71:43,0,58	0/0:10,0:10:21.08:0,21,284	0/0:10,0:5:8.53:0,9,65	0/1:11,0:8:3.15:3,0,132	0/0:20,0:20:48.13:0,48,591	0/0:18,0:17:48.05:0,48,565	0/0:14,0:14:31.95:0,32,442	0/0:30,0:29:80.14:0,80,953	1/1:1,17:18:29.77:371,30,0	0/0:25,0:25:75.10:0,75,881	0/0:23,0:23:54.07:0,54,652	1/1:0,20:19:27.09:360,27,0	1/1:3,18:20:43.91:563,44,0	0/0:16,0:16:45.10:0,45,530	0/0:23,0:23:63.20:0,63,801	0/0:22,1:23:25.97:0,26,691	0/0:25,0:25:69.19:0,69,846	0/0:27,0:26:62.21:0,62,709	0/0:24,0:24:68.99:0,69,762	0/0:20,0:20:48.22:0,48,626	0/0:15,0:15:45.12:0,45,551	1/1:0,9:9:21.02:260,21,0	1/1:2,20:23:48.83:611,49,0	1/1:0,11:11:27.09:356,27,0	0/0:10,0:10:19.49:0,19,269	0/0:22,0:22:60.09:0,60,670	0/0:31,0:31:89.99:0,90,1050	0/0:17,0:17:51.08:0,51,595
chr10	75881247	.	T	TCATGA	9392.57	PASS	AB=0.952;AC=15;AF=0.268;AN=56;BaseQRankSum=-6.187;DP=677;FS=8.418;HRun=0;HaplotypeScore=117.1903;InbreedingCoeff=0.9077;MQ=58.78;MQ0=24;MQRankSum=-13.665;QD=62.62;ReadPosRankSum=0.462;VQSLOD=5.4761;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:14:36.12:1158,36,0	0/0:7,0:7:21.07:0,21,467	0/0:57,0:27:78.27:0,78,1616	0/0:59,0:24:60.12:0,60,1173	0/0:30,0:29:87.29:0,87,1876	0/0:21,0:21:63.22:0,63,1405	0/0:17,0:17:51.18:0,51,1136	0/0:33,0:32:93.28:0,93,2017	1/1:4,14:18:42.14:1344,42,0	0/0:20,0:20:57.18:0,57,1205	0/0:15,0:14:42.14:0,42,937	1/1:1,23:24:66.23:2100,66,0	1/1:5,16:20:54.19:1700,54,0	0/0:19,0:19:54.16:0,54,1158	0/0:31,0:31:81.28:0,81,1806	0/0:37,0:37:99:0,108,2366	0/0:37,0:37:99:0,108,2382	0/1:19,0:19:25.06:25,0,954	0/0:23,0:22:53.92:0,54,1126	0/0:16,0:16:45.15:0,45,972	0/0:13,0:13:39.13:0,39,851	1/1:6,13:19:36.12:1158,36,0	1/1:7,12:17:39.13:1243,39,0	1/1:5,7:12:21.07:665,21,0	0/0:20,0:20:57.18:0,57,1230	0/0:25,0:24:69.24:0,69,1538	0/0:26,0:26:75.23:0,75,1588	0/0:20,0:19:54.19:0,54,1203
chr10	75883480	.	A	AAC	2045.70	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.983;DP=723;FS=0.000;HRun=0;HaplotypeScore=85.5197;InbreedingCoeff=0.9277;MQ=83.36;MQ0=0;MQRankSum=-3.558;QD=44.47;ReadPosRankSum=2.003;VQSLOD=4.7847;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,40:46:99:2141,117,0	0/0:5,0:5:15.04:0,15,197	0/0:26,0:26:63.13:0,63,842	0/0:20,0:20:38.80:0,39,519	0/0:22,0:22:66.22:0,66,945	0/0:21,0:21:57.19:0,57,817	0/0:35,0:35:99:0,102,1461	0/0:25,0:25:69.22:0,69,958	0/0:22,0:22:66.22:0,66,937	0/0:26,0:26:72.22:0,72,995	0/0:10,0:10:21.07:0,21,299	0/0:41,0:41:99:0,114,1617	0/0:25,0:25:72.24:0,72,1031	0/0:32,0:32:96.32:0,96,1376	0/0:37,0:37:99:0,111,1573	0/0:32,0:32:96.32:0,96,1376	0/0:37,0:37:99:0,102,1443	0/0:25,0:25:72.18:0,72,984	0/0:16,0:16:48.16:0,48,688	0/0:17,0:17:51.17:0,51,731	0/0:54,0:54:99:0,163,2284	0/0:21,0:21:60.20:0,60,851	0/0:21,0:21:63.18:0,63,866	0/0:33,0:33:90.30:0,90,1290	0/0:21,0:21:63.21:0,63,902	0/0:28,0:28:81.26:0,81,1128	0/0:21,0:21:63.21:0,63,902	0/0:4,0:4:9.03:0,9,129
chr10	75883852	.	A	AT	1633.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.546;DP=849;FS=3.700;HRun=2;HaplotypeScore=78.6260;InbreedingCoeff=0.9989;MQ=83.91;MQ0=0;MQRankSum=-5.107;QD=36.29;ReadPosRankSum=3.672;VQSLOD=4.3911;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,43:45:99:1728,120,0	0/0:14,0:14:39.11:0,39,470	0/0:22,0:22:66.19:0,66,803	0/0:36,0:36:66.15:0,66,1167	0/0:28,0:28:81.22:0,81,976	0/0:20,0:20:57.18:0,57,706	0/0:31,0:31:93.28:0,93,1139	0/0:40,0:40:99:0,114,1391	0/0:36,0:36:99:0,105,1288	0/0:33,0:33:93.29:0,93,1153	0/0:13,0:13:39.11:0,39,472	0/0:42,0:42:99:0,123,1512	0/0:41,0:41:99:0,120,1474	0/0:32,0:32:96.30:0,96,1189	0/0:57,0:57:99:0,172,2095	0/0:39,0:39:99:0,117,1437	0/0:33,0:33:93.29:0,93,1152	0/0:20,0:20:54.17:0,54,669	0/0:26,0:26:78.25:0,78,967	0/0:23,0:23:63.20:0,63,780	0/0:60,0:60:99:0,171,2091	0/0:21,0:21:60.18:0,60,730	0/0:23,0:23:66.19:0,66,804	0/0:24,0:24:60.19:0,60,744	0/0:24,0:24:72.19:0,72,865	0/0:23,0:23:69.22:0,69,856	0/0:34,0:34:99:0,102,1263	0/0:9,0:9:27.07:0,27,321
chr10	75883981	.	TCTA	T	9610.10	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=16.858;DP=859;FS=6.990;HRun=0;HaplotypeScore=126.1933;InbreedingCoeff=0.9995;MQ=88.54;MQ0=0;MQRankSum=-9.493;QD=46.20;ReadPosRankSum=3.996;VQSLOD=7.0311;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,3429	0/0:8,0:8:24.08:0,24,588	0/0:36,0:36:99:0,108,2506	0/0:34,0:35:60.74:0,61,2190	0/0:24,0:24:72.25:0,72,1730	0/0:18,0:18:54.19:0,54,1318	0/0:32,0:32:96.33:0,96,2345	0/0:40,0:40:99:0,120,2837	1/1:1,36:37:99:1952,105,0	0/0:23,0:23:66.22:0,66,1573	0/0:18,0:18:54.19:0,54,1269	1/1:0,48:48:99:2293,123,0	1/1:0,40:40:99:1899,102,0	0/0:30,0:30:90.31:0,90,2177	0/0:39,0:39:99:0,117,2874	0/0:46,0:46:99:0,138,3397	0/0:25,0:25:72.25:0,72,1774	0/0:25,0:25:75.26:0,75,1813	0/0:22,0:22:66.23:0,66,1621	0/0:20,0:20:60.21:0,60,1479	0/0:60,0:60:99:0,178,4327	1/1:0,19:19:42.14:782,42,0	1/1:0,22:22:48.16:893,48,0	1/1:0,42:42:96.80:1791,97,0	0/0:32,0:32:96.31:0,96,2315	0/0:25,0:25:75.25:0,75,1784	0/0:34,0:34:99:0,102,2497	0/0:11,0:11:33.11:0,33,813
chr10	75884287	.	GA	G	2201.50	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.956;DP=633;FS=5.376;HRun=11;HaplotypeScore=63.5356;InbreedingCoeff=0.9185;MQ=70.69;MQ0=0;MQRankSum=-0.323;QD=15.73;ReadPosRankSum=3.274;VQSLOD=4.5894;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.17:0,72,760	0/0:9,0:9:27.07:0,27,288	0/0:12,0:12:11.21:0,11,127	0/0:10,0:10:12.81:0,13,88	0/0:13,0:15:38.76:0,39,379	0/0:30,3:33:7.23:0,7,674	0/0:22,0:22:57.14:0,57,608	0/0:32,1:36:65.22:0,65,848	1/1:4,15:19:9.94:288,10,0	0/0:19,1:20:51.05:0,51,529	0/0:15,2:17:8.44:0,8,295	1/1:7,24:31:59.78:483,60,0	1/1:5,29:34:71.74:591,72,0	0/0:31,0:31:90.19:0,90,932	0/0:44,3:47:55.38:0,55,1198	0/0:28,2:31:47.36:0,47,688	0/0:28,1:29:59.57:0,60,831	0/0:12,0:12:36.07:0,36,373	0/0:17,0:17:42.05:0,42,419	0/0:20,0:21:56.96:0,57,582	0/0:20,0:21:47.95:0,48,494	1/1:1,20:21:27.93:436,28,0	1/1:5,14:19:6.95:263,7,0	1/1:2,14:16:38.95:320,39,0	0/0:21,0:21:54.06:0,54,549	0/0:23,0:23:57.14:0,57,608	0/0:28,1:31:34.95:0,35,710	0/0:11,0:11:9.03:0,9,238
chr10	75884527	.	AAAAG	A	1427.73	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=3.647;DP=564;FS=4.176;HRun=0;HaplotypeScore=92.4383;InbreedingCoeff=0.8058;MQ=54.25;MQ0=12;MQRankSum=-1.846;QD=9.27;ReadPosRankSum=-2.363;VQSLOD=1.9364;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:18.07:233,18,0	0/0:7,0:7:3.80:0,4,193	0/1:35,0:6:8.12:8,0,114	0/0:44,0:10:9.89:0,10,122	0/0:23,0:22:14.05:0,14,326	0/0:30,0:30:63.05:0,63,1056	0/0:18,0:18:38.47:0,38,553	0/0:26,0:26:32.59:0,33,464	1/1:10,0:10:20.89:133,21,0	0/0:18,0:17:33.97:0,34,385	0/0:23,0:23:52.48:0,52,628	1/1:19,0:19:45.17:358,45,0	1/1:23,0:23:49.05:401,49,0	0/0:12,0:12:31.71:0,32,401	0/0:28,0:27:45.26:0,45,708	0/0:15,0:15:40.93:0,41,616	0/0:22,0:21:11.98:0,12,362	0/0:24,0:23:25.95:0,26,713	0/0:20,0:19:1.16:0,1,374	0/0:24,0:24:44.93:0,45,556	0/0:6,0:5:6:0,6,77	1/1:9,1:10:11.88:91,12,0	1/1:1,21:22:26.58:169,27,0	1/1:14,1:14:21.65:229,22,0	0/0:16,0:16:23.56:0,24,504	0/0:21,0:20:8.23:0,8,283	0/0:23,0:23:61.07:0,61,790	0/0:10,0:9:23.75:0,24,225
chr10	75884528	.	AAAG	A	1328.08	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=4.505;DP=563;FS=6.259;HRun=0;HaplotypeScore=84.1001;InbreedingCoeff=0.7121;MQ=54.40;MQ0=11;MQRankSum=-1.012;QD=7.59;ReadPosRankSum=-3.228;VQSLOD=1.3749;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:30.20:232,30,0	0/0:7,0:7:0.93:0,1,159	0/1:34,0:6:8.11:8,0,98	0/0:43,0:10:8.99:0,9,121	0/0:23,0:22:2.42:0,2,248	0/0:28,0:28:72.45:0,72,875	0/0:20,0:20:44.03:0,44,526	0/0:26,0:26:4.10:0,4,370	1/1:11,0:11:24.77:146,25,0	0/0:18,0:17:37.67:0,38,385	0/0:24,0:24:37.78:0,38,600	1/1:19,0:19:43.20:334,43,0	1/1:23,0:23:52.21:360,52,0	0/0:12,0:12:24.90:0,25,308	0/0:27,0:26:35.34:0,35,566	0/0:15,0:15:41.32:0,41,511	0/0:23,0:22:18.62:0,19,311	0/0:24,0:23:27.47:0,27,612	0/0:20,0:19:0.14:0,0,339	0/0:24,0:24:43.34:0,43,477	0/0:6,0:5:6:0,6,66	1/1:3,7:10:11.88:85,12,0	1/1:22,0:22:26.18:162,26,0	1/1:14,1:14:25.06:188,25,0	0/0:15,0:15:23.51:0,24,445	0/1:21,0:20:1.43:1,0,240	0/0:23,0:23:62.26:0,62,699	0/0:10,0:9:23.86:0,24,207
chr10	75884899	.	G	GAA	2031.81	PASS	AB=0.967;AC=13;AF=0.232;AN=56;BaseQRankSum=-1.717;DP=671;FS=9.641;HRun=14;HaplotypeScore=95.8079;InbreedingCoeff=0.8737;MQ=71.44;MQ0=2;MQRankSum=0.675;QD=13.11;ReadPosRankSum=-1.738;VQSLOD=1.6457;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:47:88.72:0,89,707	0/0:11,0:11:23.88:0,24,200	0/1:28,0:16:27.81:28,0,34	0/0:20,0:12:7.20:0,7,80	0/0:20,0:22:38.28:0,38,341	0/0:20,0:22:26.46:0,26,292	0/0:26,0:27:47.48:0,47,426	0/0:30,0:42:42.16:0,42,445	1/1:2,10:13:21.07:275,21,0	0/0:28,0:30:47.21:0,47,379	0/0:14,0:17:31.90:0,32,235	1/1:6,24:32:18.72:504,19,0	1/1:5,13:19:32.42:367,32,0	0/0:19,0:21:32.42:0,32,262	0/0:30,0:32:59.88:0,60,531	0/0:15,0:21:35.35:0,35,316	0/0:26,0:34:42.21:0,42,394	0/0:18,0:18:13.17:0,13,204	0/0:16,0:19:49.89:0,50,384	0/0:20,0:20:24.62:0,25,352	0/0:18,0:18:30.81:0,31,274	1/1:4,9:12:18.06:233,18,0	1/1:8,11:19:24.21:277,24,0	1/1:3,20:29:45.04:537,45,0	0/0:14,0:14:19.36:0,19,215	0/0:27,0:28:37.74:0,38,340	0/0:19,0:23:22.87:0,23,303	0/0:22,0:29:52.60:0,53,430
chr10	75885882	.	T	TA	3617.20	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.487;DP=589;FS=7.634;HRun=6;HaplotypeScore=65.7009;InbreedingCoeff=0.9991;MQ=78.44;MQ0=1;MQRankSum=-0.591;QD=30.65;ReadPosRankSum=2.659;VQSLOD=4.3346;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.16:0,96,961	0/0:10,0:10:30.04:0,30,297	0/0:14,0:13:30.01:0,30,281	0/0:18,0:18:38.79:0,39,374	0/0:25,0:25:66.13:0,66,666	0/0:21,0:21:54.12:0,54,551	0/0:15,0:15:45.08:0,45,452	0/0:24,0:24:66.14:0,66,667	1/1:0,9:9:24.08:298,24,0	0/0:24,0:24:63.12:0,63,636	0/0:22,0:22:54.10:0,54,543	1/1:2,24:26:57.18:717,57,0	1/1:2,21:23:60.19:755,60,0	0/0:26,0:26:72.14:0,72,727	0/0:26,0:26:75.15:0,75,757	0/0:26,0:26:75.11:0,75,738	0/0:17,0:17:45.10:0,45,459	0/0:21,0:21:57.13:0,57,581	0/0:16,0:16:45.06:0,45,440	0/0:22,0:22:60.13:0,60,607	0/0:20,0:20:51.02:0,51,492	1/1:4,12:16:39.12:489,39,0	1/1:1,22:23:57.18:717,57,0	1/1:1,20:21:51.16:642,51,0	0/0:26,0:26:75.14:0,75,757	0/0:24,0:24:66.15:0,66,673	0/0:31,0:31:87.18:0,87,880	0/0:9,0:9:27.06:0,27,275
chr10	75886122	.	A	AGT	8172.28	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-12.441;DP=621;FS=8.370;HRun=0;HaplotypeScore=74.8710;InbreedingCoeff=0.9913;MQ=85.62;MQ0=5;MQRankSum=-3.949;QD=44.90;ReadPosRankSum=5.463;VQSLOD=6.2248;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,46:47:99:2192,120,0	0/0:4,0:4:12.04:0,12,172	0/0:28,0:28:64.86:0,65,826	0/0:22,0:23:53.66:0,54,724	0/0:15,0:15:36.11:0,36,496	0/0:20,0:20:57.14:0,57,745	0/0:30,0:30:84.27:0,84,1181	0/0:29,0:29:87.26:0,87,1171	1/1:0,21:22:60.21:1098,60,0	0/0:15,0:15:45.14:0,45,614	0/0:12,0:12:36.11:0,36,498	1/1:1,27:28:72.16:1317,72,0	1/1:1,27:27:72.24:1315,72,0	0/0:24,0:24:72.19:0,72,957	0/0:21,0:21:60.20:0,60,859	0/0:20,0:20:54.18:0,54,764	0/0:30,0:30:84.26:0,84,1181	0/0:22,0:22:66.22:0,66,945	0/0:16,0:16:42.12:0,42,579	0/0:14,0:14:39.11:0,39,539	0/0:49,0:49:99:0,141,1999	1/1:1,19:20:54.19:987,54,0	1/1:2,7:10:15.05:274,15,0	1/1:0,27:23:54.19:988,54,0	0/0:10,0:10:30.09:0,30,413	0/0:25,0:25:75.23:0,75,1029	0/0:21,0:21:60.19:0,60,841	0/0:11,0:11:30.07:0,30,392
chr10	75886874	.	ACT	A	5562.42	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.051;DP=654;FS=0.361;HRun=0;HaplotypeScore=79.9845;InbreedingCoeff=0.9883;MQ=73.38;MQ0=1;MQRankSum=0.348;QD=39.17;ReadPosRankSum=2.694;VQSLOD=6.6501;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1910	0/0:7,0:7:18.06:0,18,336	0/0:14,0:14:32.98:0,33,520	0/0:14,0:15:14.93:0,15,285	0/0:15,0:15:36.12:0,36,664	0/0:16,0:16:48.16:0,48,899	0/0:38,0:38:99:0,114,2104	0/0:24,0:24:72.25:0,72,1331	1/1:0,34:33:90.30:1325,90,0	0/0:13,0:13:39.13:0,39,729	0/0:13,0:13:36.12:0,36,674	1/1:0,37:37:99:1502,102,0	1/1:1,26:27:72.24:1060,72,0	0/0:28,0:28:81.26:0,81,1475	0/0:39,0:39:99:0,117,2182	0/0:27,0:27:81.28:0,81,1490	0/0:37,0:37:99:0,111,2078	0/0:37,0:37:99:0,108,2023	0/0:22,0:22:60.21:0,60,1123	0/0:5,0:5:15.05:0,15,281	0/0:38,0:38:99:0,114,2135	1/1:2,17:19:51.17:749,51,0	1/1:0,7:7:14.88:221,15,0	1/1:1,17:18:48.16:705,48,0	0/0:11,0:11:30.10:0,30,561	0/0:34,0:34:99:0,99,1843	0/0:26,0:26:78.25:0,78,1428	0/0:17,0:17:39.13:0,39,730
chr10	75887269	.	G	GCC	1680.25	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-2.883;DP=500;FS=10.556;HRun=8;HaplotypeScore=65.2038;InbreedingCoeff=0.9637;MQ=69.19;MQ0=0;MQRankSum=-0.387;QD=18.88;ReadPosRankSum=-0.074;VQSLOD=0.8206;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:63.12:0,63,691	0/0:5,0:5:14.87:0,15,146	0/0:6,0:6:18:0,18,178	0/0:9,0:9:14.96:0,15,154	0/0:18,0:19:44.85:0,45,477	0/0:16,0:15:30.06:0,30,334	0/0:26,0:27:74.87:0,75,789	0/0:16,0:16:39.07:0,39,413	1/1:4,10:14:21.04:290,21,0	0/0:17,0:17:36.06:0,36,389	0/0:11,0:11:24.06:0,24,267	1/1:5,10:16:23.57:336,24,0	1/1:2,19:21:30.10:476,30,0	0/0:26,0:26:75.15:0,75,816	0/0:25,0:25:54.07:0,54,592	0/0:31,0:32:83.92:0,84,894	0/0:37,0:37:99:0,102,1125	0/0:18,0:18:45.11:0,45,499	0/0:7,0:7:18.05:0,18,199	0/0:17,0:17:33.08:0,33,367	0/0:38,0:38:99:0,102,1121	1/1:0,11:11:21.07:333,21,0	1/1:4,4:8:6.02:95,6,0	1/1:6,13:19:21.07:334,21,0	0/0:10,0:10:24.06:0,24,267	0/0:24,0:24:59.89:0,60,669	0/0:17,0:17:48.13:0,48,534	0/0:7,0:7:21.04:0,21,224
chr10	75890865	.	G	GA	1294.24	PASS	AB=0.940;AC=22;AF=0.393;AN=56;BaseQRankSum=0.064;DP=580;FS=4.401;HRun=15;HaplotypeScore=82.5019;InbreedingCoeff=0.3045;MQ=62.79;MQ0=3;MQRankSum=0.791;QD=4.02;ReadPosRankSum=-1.532;VQSLOD=1.0951;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:34,11:48:50.44:459,50,0	0/0:9,0:9:11.11:0,11,60	0/1:10,0:5:7.56:15,0,8	0/0:13,0:7:4.80:0,5,26	0/1:17,3:21:1.50:1,0,85	1/1:6,0:6:2.96:19,3,0	0/0:13,1:16:13.13:0,13,79	0/0:25,0:25:7.58:0,8,110	1/1:18,2:20:21.11:241,21,0	0/0:14,0:13:26.42:0,26,146	0/1:12,0:13:6.05:6,0,114	1/1:22,4:26:8.53:214,9,0	1/1:6,12:19:2.71:35,3,0	0/1:22,1:23:7.05:7,0,59	0/0:19,0:19:11.42:0,11,145	0/1:27,2:30:10.51:11,0,142	0/0:29,1:30:2.59:0,3,217	0/0:15,2:17:7.86:0,8,156	0/1:30,1:31:39:39,0,142	0/0:22,0:23:11.76:0,12,124	0/1:26,1:27:49.80:50,0,80	1/1:15,1:16:19.91:137,20,0	0/1:13,2:15:3.53:58,0,4	1/1:4,12:16:9.29:177,9,0	0/0:20,0:20:12.12:0,12,157	0/0:15,2:21:3.10:0,3,104	0/0:29,0:30:18.79:0,19,203	0/0:19,0:16:5.62:0,6,89
chr10	75892024	.	TACTGCCACTGCC	T	5132.77	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.876;DP=491;FS=30.112;HRun=0;HaplotypeScore=161.6196;InbreedingCoeff=0.9425;MQ=67.53;MQ0=0;MQRankSum=-9.888;QD=54.60;ReadPosRankSum=-1.072;VQSLOD=2.8498;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:36.59:0,37,1849	0/0:5,0:5:9.03:0,9,534	0/0:26,0:24:30.13:0,30,1460	0/0:19,0:16:29.89:0,30,947	0/0:21,0:21:48.16:0,48,2697	0/0:15,0:15:30.10:0,30,1396	0/0:22,0:22:60.19:0,60,3234	0/0:22,0:22:31.92:0,32,1038	1/1:8,12:20:30.10:1068,30,0	0/0:10,0:10:18.06:0,18,912	0/0:9,0:9:15.04:0,15,729	1/1:1,20:21:39.13:1376,39,0	1/1:7,12:19:39.13:1362,39,0	0/0:27,0:27:57.20:0,57,3263	0/0:29,0:29:66.23:0,66,3605	0/0:32,0:32:93.32:0,93,5064	0/0:25,0:25:63.20:0,63,3486	0/0:18,0:18:45.15:0,45,2490	0/0:11,0:10:18.06:0,18,602	0/0:14,0:14:33.11:0,33,1591	0/0:16,0:16:39.13:0,39,1905	1/1:6,12:18:18.18:721,18,0	1/1:2,5:7:12.04:427,12,0	1/1:6,3:9:6.02:179,6,0	0/0:11,0:11:15.05:0,15,894	0/0:18,0:18:33.11:0,33,1915	0/0:23,0:22:69.22:0,69,3599	0/0:5,0:5:12.04:0,12,648
chr10	75892135	.	GGTGT	G	2474.68	PASS	AB=0.980;AC=18;AF=0.333;AN=54;BaseQRankSum=2.425;DP=583;FS=0.571;HRun=0;HaplotypeScore=114.4000;InbreedingCoeff=0.7670;MQ=60.10;MQ0=11;MQRankSum=2.325;QD=11.35;ReadPosRankSum=1.519;VQSLOD=3.2569;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:9.01:121,9,0	0/0:13,0:13:21.05:0,21,312	0/0:36,0:20:2.74:0,3,12	0/0:33,0:12:3.48:0,3,64	0/0:18,0:18:24.07:0,24,520	0/0:17,0:19:20.69:0,21,412	0/0:15,0:15:23.80:0,24,445	0/0:20,0:20:9.02:0,9,171	1/1:8,13:21:18.06:288,18,0	1/1:16,0:18:14.80:138,15,0	./.	1/1:16,2:17:21.56:451,22,0	1/1:19,1:20:33.09:490,33,0	0/0:22,0:22:27.58:0,28,542	0/0:28,0:29:53.36:0,53,1126	0/0:19,0:19:38.99:0,39,896	0/0:22,0:22:30.04:0,30,587	0/0:23,0:22:37.68:0,38,740	0/0:13,0:12:18.06:0,18,397	0/0:27,0:26:47.77:0,48,840	0/0:10,0:10:18.97:0,19,481	1/1:18,4:22:30.46:415,30,0	1/1:20,7:28:36.08:517,36,0	1/1:20,4:22:15.51:218,16,0	0/0:17,0:17:18.06:0,18,401	0/1:23,0:24:28.46:28,0,733	0/1:25,0:24:6.40:6,0,765	0/0:16,0:18:23.80:0,24,449
chr10	75911916	.	C	CT	277.66	PASS	AB=0.916;AC=4;AF=0.071;AN=56;BaseQRankSum=0.307;DP=545;FS=1.610;HRun=11;HaplotypeScore=76.5094;InbreedingCoeff=0.3596;MQ=73.12;MQ0=0;MQRankSum=0.191;QD=6.61;ReadPosRankSum=-1.420;VQSLOD=1.9961;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:20:36.07:365,36,0	0/0:8,0:8:23.91:0,24,186	0/0:17,0:17:15.76:0,16,146	0/1:9,0:9:2.68:3,0,52	0/0:29,3:33:9.85:0,10,433	0/0:22,1:23:26.32:0,26,387	0/0:15,0:16:37.86:0,38,282	0/0:24,0:26:60.81:0,61,452	0/1:11,1:12:15.57:16,0,78	0/0:21,0:23:40.83:0,41,308	0/0:18,0:18:47.79:0,48,369	0/0:14,1:16:7.44:0,7,231	0/0:20,0:21:37.87:0,38,284	0/0:21,1:23:6.66:0,7,230	0/0:16,1:18:4.41:0,4,208	0/0:14,0:14:29.04:0,29,230	0/0:17,0:17:38.80:0,39,302	0/0:13,0:13:17.89:0,18,139	0/0:13,0:14:28.92:0,29,215	0/0:31,2:34:7.75:0,8,411	0/0:9,0:10:23.89:0,24,186	0/0:21,1:23:16.37:0,16,299	0/0:18,1:20:4.40:0,4,207	0/0:9,0:10:16.97:0,17,122	0/0:28,2:30:36.17:0,36,459	0/0:28,0:31:71.42:0,71,528	0/0:30,2:34:45.32:0,45,515	0/0:9,0:10:27.98:0,28,197
chr10	75911978	.	C	CT	2228.13	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-6.070;DP=565;FS=9.244;HRun=10;HaplotypeScore=68.5878;InbreedingCoeff=0.8181;MQ=74.28;MQ0=2;MQRankSum=-0.485;QD=16.75;ReadPosRankSum=2.886;VQSLOD=4.0209;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:49.26:0,49,432	0/0:6,0:6:5.99:0,6,49	0/0:29,0:22:9.61:0,10,152	0/1:25,0:18:6.85:7,0,163	0/0:31,0:31:83.71:0,84,673	0/0:22,0:23:65.28:0,65,522	0/0:15,0:15:20.84:0,21,234	0/0:28,2:30:7.03:0,7,457	1/1:1,17:18:42.11:448,42,0	0/0:23,0:23:62.92:0,63,517	0/0:26,1:28:41.96:0,42,540	1/1:2,12:14:33.08:352,33,0	1/1:3,17:20:38.82:415,39,0	0/0:16,0:16:35.92:0,36,296	0/0:17,0:17:50.92:0,51,415	0/0:19,0:20:49.97:0,50,398	0/0:21,0:22:52.97:0,53,424	0/0:21,0:21:50.69:0,51,399	0/0:20,0:20:53.48:0,53,423	0/0:28,0:28:68.88:0,69,564	0/0:9,0:9:23.95:0,24,197	1/1:4,15:19:42.10:446,42,0	1/1:2,22:24:10.82:507,11,0	1/1:3,10:13:2.43:231,2,0	0/0:18,0:18:44.91:0,45,365	0/0:29,0:30:67.86:0,68,583	0/0:19,0:19:47.94:0,48,394	0/0:4,0:4:11.93:0,12,91
chr10	75913435	.	C	CA	822.85	PASS	AB=0.800;AC=15;AF=0.268;AN=56;BaseQRankSum=-1.213;DP=374;FS=5.642;HRun=12;HaplotypeScore=38.1909;InbreedingCoeff=0.1160;MQ=54.26;MQ0=17;MQRankSum=-0.218;QD=7.28;ReadPosRankSum=1.868;VQSLOD=1.2875;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:11,10:19:13.81:189,0,14	0/1:4,1:4:15.90:23,0,16	0/0:3,0:1:2.98:0,3,22	0/1:5,0:5:10.09:16,0,10	0/0:12,0:11:26.83:0,27,197	0/0:22,1:23:18.53:0,19,299	0/1:9,0:9:3.30:3,0,91	0/0:24,1:25:5.74:0,6,278	1/1:3,7:10:18.03:175,18,0	0/0:10,0:9:23.84:0,24,174	0/0:17,1:19:23.58:0,24,327	0/1:3,6:10:25.95:84,0,26	1/1:4,7:11:2.13:182,2,0	0/1:11,1:11:5.33:5,0,128	0/0:7,0:7:19.93:0,20,137	0/1:7,1:8:14.28:14,0,71	0/0:30,2:33:1.54:0,2,298	0/0:13,1:16:13.51:0,14,237	0/0:10,0:10:26.85:0,27,197	0/0:21,1:22:9.54:0,10,233	0/0:5,0:4:8.93:0,9,64	1/1:3,2:4:6.01:57,6,0	0/1:3,6:9:0.88:154,0,1	0/1:4,3:6:28.79:73,0,29	0/0:16,0:17:2.37:0,2,173	0/0:12,0:12:23.85:0,24,174	0/0:24,0:23:59.58:0,60,433	0/0:17,1:16:6.61:0,7,209
chr10	75918380	.	A	ACACACA	1153.92	PASS	AB=1.000;AC=16;AF=0.296;AN=54;BaseQRankSum=1.962;DP=663;FS=8.136;HRun=0;HaplotypeScore=155.2959;InbreedingCoeff=0.4629;MQ=63.75;MQ0=7;MQRankSum=-2.265;QD=5.29;ReadPosRankSum=-4.154;VQSLOD=0.7403;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:19.88:0,20,249	0/0:10,0:10:11.97:0,12,205	./.	0/0:27,0:20:2.86:0,3,41	0/0:23,0:23:21.02:0,21,287	0/1:22,0:22:5.97:6,0,447	0/0:28,0:28:8.01:0,8,478	0/0:36,0:36:17.56:0,18,221	1/1:22,0:22:9.50:290,10,0	0/0:15,0:15:11.84:0,12,127	0/0:17,0:17:9.49:0,9,149	1/1:28,0:28:3.90:89,4,0	1/1:16,0:16:27.03:473,27,0	0/0:20,0:20:18.04:0,18,328	0/0:24,0:24:21.60:0,22,412	0/0:21,0:21:33.10:0,33,577	0/0:34,0:34:39.96:0,40,676	0/0:11,0:11:18.06:0,18,365	0/1:15,0:15:18.02:18,0,20	0/1:21,0:21:31.60:32,0,59	0/0:53,0:53:50.51:0,51,809	1/1:21,0:21:6.02:147,6,0	1/1:15,5:22:6.01:120,6,0	1/1:28,0:27:5.19:134,5,0	0/1:23,0:23:11.09:11,0,190	0/0:27,0:27:27.54:0,28,439	0/0:32,0:32:1.69:0,2,4	0/0:18,0:17:2.76:0,3,61
chr10	75920225	.	CGT	C	161.19	PASS	AB=0.968;AC=14;AF=0.280;AN=50;BaseQRankSum=1.844;DP=558;FS=12.206;HRun=0;HaplotypeScore=74.9830;InbreedingCoeff=-0.2811;MQ=63.51;MQ0=22;MQRankSum=0.209;QD=0.58;ReadPosRankSum=2.016;VQSLOD=0.1560;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:20:14:39,0,14	0/0:9,0:9:9.02:0,9,107	./.	./.	0/0:15,0:15:12.01:0,12,137	0/1:19,0:19:18.79:19,0,38	0/0:32,0:31:2.99:0,3,24	./.	0/1:12,3:13:25.53:26,0,38	0/0:25,0:25:2.31:0,2,67	0/0:12,0:12:5.99:0,6,64	0/0:18,0:17:11.90:0,12,136	0/0:26,0:26:21.50:0,21,233	0/1:19,0:18:16.43:16,0,92	0/1:22,0:23:1.25:1,0,103	0/1:11,0:12:5.23:5,0,70	0/1:29,0:27:14.88:15,0,232	0/1:18,0:18:51.55:56,0,52	1/1:19,0:18:2.80:13,3,0	0/0:16,0:15:10.14:0,10,66	0/1:55,0:51:11.29:11,0,102	0/0:15,0:14:14.77:0,15,144	0/1:16,2:16:71.96:72,0,76	0/1:18,0:17:10.78:11,0,111	0/0:25,0:24:3.43:0,3,164	0/0:23,0:23:4.35:0,4,209	0/0:18,0:16:14.88:0,15,144	0/1:11,0:7:11.90:12,0,149
chr10	75923735	.	TG	T	418.10	PASS	AB=0.964;AC=13;AF=0.232;AN=56;BaseQRankSum=10.095;DP=605;FS=1.974;HRun=1;HaplotypeScore=65.8046;InbreedingCoeff=0.8366;MQ=66.05;MQ0=9;MQRankSum=-2.341;QD=3.80;ReadPosRankSum=-0.697;VQSLOD=0.0115;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:33:20.50:0,20,949	0/0:14,0:14:42.13:0,42,560	0/0:55,1:20:42.92:0,43,418	0/1:51,2:23:41.61:42,0,276	0/0:36,0:35:99:0,105,1425	0/0:17,0:17:51.08:0,51,644	0/0:16,0:16:45.10:0,45,555	0/0:19,0:19:54.06:0,54,639	1/1:11,0:11:10.84:53,11,0	0/0:31,0:29:84.15:0,84,1046	0/0:30,0:30:90.23:0,90,1141	1/1:9,1:10:8.37:47,8,0	1/1:10,0:10:13.86:85,14,0	0/0:13,1:14:21.37:0,21,434	0/0:17,0:17:51.09:0,51,587	0/0:15,0:15:45.13:0,45,600	0/0:25,0:25:75.17:0,75,968	0/0:18,0:18:54.08:0,54,625	0/0:22,0:21:63.16:0,63,746	0/0:24,0:24:72.16:0,72,936	0/0:3,0:3:9.03:0,9,117	1/1:14,1:15:37.30:248,37,0	1/1:5,0:5:9.95:57,10,0	1/1:5,0:5:10.94:66,11,0	0/0:29,0:29:87.24:0,87,1126	0/0:33,0:33:99:0,99,1280	0/0:34,0:34:99:0,100,1211	0/0:8,0:8:10.82:0,11,183
chr10	75925183	.	C	CT	3971.74	PASS	AB=0.955;AC=16;AF=0.286;AN=56;BaseQRankSum=-8.807;DP=668;FS=12.558;HRun=9;HaplotypeScore=65.6526;InbreedingCoeff=0.8755;MQ=65.70;MQ0=8;MQRankSum=0.723;QD=19.66;ReadPosRankSum=0.864;VQSLOD=3.1414;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,33:43:99:1111,103,0	0/1:9,1:10:3.18:3,0,204	0/1:30,0:14:1.71:2,0,132	0/0:30,0:17:17.98:0,18,247	0/0:37,0:37:95.95:0,96,830	0/0:27,0:27:62.98:0,63,546	0/0:32,0:31:80.82:0,81,703	0/0:36,0:36:83.92:0,84,723	1/1:0,16:17:38.94:412,39,0	0/0:24,1:24:14.79:0,15,357	0/0:23,0:23:59.73:0,60,520	1/1:5,15:20:39.11:431,39,0	1/1:2,14:17:41.95:446,42,0	0/0:18,0:18:35.95:0,36,312	0/0:20,0:20:47.99:0,48,417	0/0:24,0:25:62.01:0,62,527	0/0:19,0:19:53.99:0,54,469	0/0:20,0:20:32.84:0,33,286	0/0:25,0:24:39.31:0,39,559	0/0:26,0:26:62.97:0,63,547	0/0:23,0:23:48.41:0,48,483	1/1:4,14:18:16.05:398,16,0	1/1:3,21:24:57.15:631,57,0	1/1:5,18:23:28.10:538,28,0	0/0:18,1:19:20.81:0,21,409	0/0:25,0:25:62.96:0,63,544	0/0:30,0:30:74.97:0,75,651	0/0:6,0:6:15:0,15,130
chr10	75925598	.	CT	C	635.49	PASS	AB=0.875;AC=3;AF=0.054;AN=56;BaseQRankSum=6.250;DP=526;FS=3.222;HRun=10;HaplotypeScore=48.4688;InbreedingCoeff=0.6099;MQ=61.08;MQ0=0;MQRankSum=1.254;QD=15.50;ReadPosRankSum=2.265;VQSLOD=3.8646;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:34:83.98:729,84,0	0/0:10,0:10:27.07:0,27,297	0/0:6,0:6:14.94:0,15,149	0/0:1,0:1:3.01:0,3,31	0/0:33,0:33:81.16:0,81,873	0/0:26,0:26:72.18:0,72,787	0/0:8,0:8:18.04:0,18,191	0/0:29,1:30:40.12:0,40,670	0/0:10,0:10:22.16:0,22,262	0/0:23,0:24:60.46:0,60,637	0/0:35,1:36:70.18:0,70,986	0/0:19,0:20:53.92:0,54,565	0/0:12,0:12:33.08:0,33,358	0/0:14,0:14:42.09:0,42,455	0/0:14,0:14:33.09:0,33,365	0/0:17,0:17:42.11:0,42,464	0/0:19,0:20:54:0,54,567	0/0:25,0:25:66.08:0,66,691	0/0:19,0:20:53.96:0,54,565	0/0:22,0:22:54.12:0,54,581	0/1:6,1:7:5:5,0,178	0/0:18,0:18:48.13:0,48,529	0/0:19,0:19:45.12:0,45,496	0/0:8,0:8:17.98:0,18,184	0/0:25,0:25:69.19:0,69,763	0/0:29,0:29:45.73:0,46,707	0/0:28,0:28:68.91:0,69,730	0/0:10,0:10:30.08:0,30,332
chr10	75929366	.	AGG	A	5133.74	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.835;DP=653;FS=0.784;HRun=3;HaplotypeScore=83.6707;InbreedingCoeff=0.9926;MQ=82.46;MQ0=0;MQRankSum=-2.753;QD=39.80;ReadPosRankSum=4.224;VQSLOD=4.5616;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.31:0,96,1820	0/0:11,0:11:33.11:0,33,637	0/0:17,0:17:48.16:0,48,898	0/0:20,0:20:54.14:0,54,948	0/0:42,0:42:99:0,126,2417	0/0:24,0:24:69.24:0,69,1328	0/0:16,0:16:48.16:0,48,927	0/0:46,0:46:99:0,132,2500	1/1:1,21:22:54.18:827,54,0	0/0:34,0:34:96.32:0,96,1821	0/0:14,0:14:39.13:0,39,753	1/1:0,22:22:60.20:919,60,0	1/1:0,15:15:42.14:641,42,0	0/0:20,0:20:60.19:0,60,1126	0/0:19,0:19:54.19:0,54,1044	0/0:18,1:19:11.31:0,11,992	0/0:22,0:22:66.23:0,66,1263	0/0:18,0:18:54.19:0,54,1043	0/0:22,0:22:63.20:0,63,1170	0/0:24,0:24:69.24:0,69,1322	0/0:22,0:22:63.22:0,63,1209	1/1:0,25:25:66.22:1001,66,0	1/1:2,24:26:60.20:919,60,0	1/1:0,19:19:54.65:827,55,0	0/0:28,0:28:84.29:0,84,1619	0/0:27,0:27:75.26:0,75,1449	0/0:28,0:28:81.28:0,81,1556	0/0:19,0:19:57.20:0,57,1101
chr10	75932489	.	AT	A	507.73	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.804;DP=366;FS=2.620;HRun=10;HaplotypeScore=40.3138;InbreedingCoeff=0.6219;MQ=74.60;MQ0=1;MQRankSum=0.694;QD=16.38;ReadPosRankSum=1.588;VQSLOD=3.7964;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:31:70.23:602,70,0	0/0:1,0:1:3:0,3,25	0/0:29,0:17:27.72:0,28,280	0/0:25,0:17:32.81:0,33,326	0/0:14,0:15:38.94:0,39,412	0/0:16,0:16:45.12:0,45,497	0/0:9,0:10:26.91:0,27,280	0/0:27,1:29:34.08:0,34,583	0/0:10,0:10:27.07:0,27,298	0/0:8,0:8:24.06:0,24,266	0/0:2,0:2:3.01:0,3,33	0/0:4,0:4:12.03:0,12,133	0/0:7,0:7:15.04:0,15,166	0/0:5,0:5:15.03:0,15,159	0/0:6,0:6:15.04:0,15,164	0/0:13,0:13:33.09:0,33,365	0/0:31,0:31:70.87:0,71,902	0/0:29,0:30:74.69:0,75,778	0/0:12,0:11:27.07:0,27,299	0/0:11,0:11:24.06:0,24,265	0/0:7,0:7:18.05:0,18,199	0/0:2,0:2:6.02:0,6,66	0/0:5,0:5:14.99:0,15,152	0/0:15,0:15:39.09:0,39,423	0/0:7,0:7:18.05:0,18,199	0/0:18,0:18:50.96:0,51,515	0/0:7,0:7:18.05:0,18,199	0/0:9,0:9:27.06:0,27,291
chr10	75932622	.	CG	C	303.30	PASS	AB=1.000;AC=11;AF=0.212;AN=52;BaseQRankSum=4.265;DP=238;FS=0.000;HRun=3;HaplotypeScore=33.3633;InbreedingCoeff=0.6889;MQ=90.88;MQ0=0;MQRankSum=0.334;QD=6.59;ReadPosRankSum=-0.315;VQSLOD=0.2167;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.10:0,45,603	./.	0/1:30,0:18:0.07:0,0,173	0/0:22,0:15:5.52:0,6,75	0/0:6,0:6:18.06:0,18,258	0/0:7,0:7:18.04:0,18,234	0/0:1,0:1:2.99:0,3,24	0/0:20,0:21:57.14:0,57,721	1/1:0,3:3:6.02:74,6,0	0/0:11,0:11:30.08:0,30,396	0/0:7,0:7:21.05:0,21,280	1/1:0,2:2:6.02:74,6,0	1/1:0,2:2:3.01:37,3,0	0/0:4,0:4:12.02:0,12,153	0/0:2,0:2:6.02:0,6,86	0/0:5,0:5:14.93:0,15,152	0/0:23,0:23:69.19:0,69,942	0/0:12,0:12:36.12:0,36,517	0/0:10,0:10:30.04:0,30,343	0/0:7,0:7:18.03:0,18,220	0/0:5,0:5:15.04:0,15,197	./.	1/1:0,7:7:18.06:221,18,0	1/1:0,2:2:3.01:37,3,0	0/0:7,0:7:18.06:0,18,257	0/0:11,0:11:33.11:0,33,471	0/0:4,0:4:12:0,12,130	0/0:9,0:9:24.06:0,24,323
chr10	75937000	.	TA	T	2086.25	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.092;DP=433;FS=5.789;HRun=9;HaplotypeScore=46.6849;InbreedingCoeff=0.9876;MQ=79.49;MQ0=2;MQRankSum=-1.064;QD=20.25;ReadPosRankSum=1.668;VQSLOD=4.1861;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:72.03:659,72,0	0/0:8,0:8:21.05:0,21,232	0/0:14,0:13:23.79:0,24,220	0/0:16,0:15:17.33:0,17,229	0/0:14,0:14:36.11:0,36,415	0/0:13,0:13:33.08:0,33,371	0/0:9,0:9:27.06:0,27,301	0/0:29,0:29:75.22:0,75,858	1/1:1,16:18:44.06:390,44,0	0/0:20,0:20:54.16:0,54,623	0/0:16,0:16:42.08:0,42,471	1/1:1,13:14:39.02:357,39,0	1/1:1,15:16:33.02:302,33,0	0/0:13,0:13:36.11:0,36,412	0/0:16,0:16:39.12:0,39,450	0/0:13,0:13:36.11:0,36,415	0/0:12,0:12:30.09:0,30,346	0/0:16,0:16:45.13:0,45,513	0/0:15,0:15:33.10:0,33,381	0/0:14,0:15:44.91:0,45,483	0/0:10,0:10:30.09:0,30,346	1/1:0,6:6:15.01:137,15,0	1/1:0,14:14:33.02:301,33,0	1/1:0,6:6:15.01:137,15,0	0/0:20,0:20:54.16:0,54,623	0/0:17,0:17:14.83:0,15,423	0/0:20,0:20:51.15:0,51,588	0/0:23,0:23:66.20:0,66,762
chr10	75938263	.	CT	C	1217.21	PASS	AB=0.836;AC=16;AF=0.286;AN=56;BaseQRankSum=7.564;DP=517;FS=6.705;HRun=13;HaplotypeScore=60.0997;InbreedingCoeff=0.6501;MQ=64.82;MQ0=6;MQRankSum=0.962;QD=6.96;ReadPosRankSum=2.962;VQSLOD=2.2129;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,21:28:56.81:390,57,0	0/1:7,1:8:6.89:7,0,97	0/0:16,0:12:8.68:0,9,108	0/0:9,2:9:6.72:0,7,75	0/0:25,1:26:50.17:0,50,628	0/0:19,0:19:51.07:0,51,491	0/0:9,0:9:14.75:0,15,124	0/0:30,0:29:45.53:0,46,430	1/1:4,16:21:11.62:238,12,0	0/0:20,0:20:28.16:0,28,314	0/1:21,3:23:13.77:14,0,353	1/1:4,11:14:20.88:153,21,0	0/1:7,9:16:2.39:148,0,2	0/0:21,0:21:39.03:0,39,364	0/0:24,1:26:8.13:0,8,349	0/0:15,2:17:4.24:0,4,355	0/1:23,2:23:0.69:1,0,281	0/0:18,1:19:17.60:0,18,321	0/0:21,1:18:14.13:0,14,292	0/0:21,0:21:30.05:0,30,292	0/0:7,0:7:15.02:0,15,146	1/1:2,5:8:16.95:115,17,0	1/1:4,10:15:8.12:141,8,0	1/1:4,10:14:26.79:193,27,0	0/0:14,0:13:30.05:0,30,292	0/0:28,1:29:32.14:0,32,459	0/0:29,0:29:63.05:0,63,598	0/0:5,0:6:14.82:0,15,117
chr10	75938900	.	C	CTT	663.02	PASS	AB=0.977;AC=14;AF=0.250;AN=56;BaseQRankSum=0.583;DP=410;FS=22.232;HRun=15;HaplotypeScore=52.4185;InbreedingCoeff=0.6513;MQ=64.33;MQ0=4;MQRankSum=-0.672;QD=7.21;ReadPosRankSum=-0.038;VQSLOD=-0.6984;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:20:16.95:0,17,85	0/0:5,0:5:8.90:0,9,71	0/0:45,0:19:2.58:0,3,66	0/0:17,0:2:2.95:0,3,22	0/0:16,0:22:32.01:0,32,222	0/0:8,0:8:17.94:0,18,142	0/0:5,0:5:14.96:0,15,117	0/1:20,0:20:22.12:22,0,183	1/1:3,5:10:16.90:159,17,0	0/0:13,0:15:20.28:0,20,142	0/0:12,0:13:17.50:0,17,168	1/1:0,4:5:6.02:76,6,0	1/1:5,6:12:11.40:120,11,0	0/0:15,0:15:33.91:0,34,256	0/0:11,0:11:22.18:0,22,157	0/0:10,0:10:14.86:0,15,158	0/0:15,0:15:28.12:0,28,175	0/0:11,0:11:25.65:0,26,169	0/0:15,0:15:17.26:0,17,160	0/0:14,0:14:18.07:0,18,162	0/1:7,0:7:15.54:16,0,56	1/1:3,5:10:14.58:137,15,0	1/1:6,9:15:18.06:227,18,0	1/1:2,9:12:7.76:83,8,0	0/0:12,0:11:2.26:0,2,111	0/0:16,0:20:22.45:0,22,231	0/0:22,0:25:37.61:0,38,390	0/0:17,0:18:23.53:0,24,214
chr10	75941156	.	A	AT	3921.59	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-6.339;DP=634;FS=9.450;HRun=10;HaplotypeScore=64.7182;InbreedingCoeff=0.9020;MQ=69.40;MQ0=3;MQRankSum=-0.337;QD=19.41;ReadPosRankSum=0.609;VQSLOD=4.1941;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,2:28:60.34:344,60,0	0/0:8,0:8:23.95:0,24,194	0/1:16,0:16:5.71:6,0,136	0/0:11,0:11:3.74:0,4,85	0/0:27,0:29:63.82:0,64,493	0/0:17,0:17:24.30:0,24,324	0/0:18,0:18:38.89:0,39,312	0/0:41,0:41:88.28:0,88,701	1/1:4,19:23:29.49:519,29,0	0/0:28,0:28:59.91:0,60,493	0/0:18,0:18:50.94:0,51,419	1/1:1,9:10:18.04:190,18,0	1/1:3,18:22:50.94:516,51,0	0/0:19,0:19:53.94:0,54,443	0/0:28,0:31:80.80:0,81,633	0/0:15,0:17:43.02:0,43,332	1/1:4,23:27:32.50:551,32,0	0/0:20,0:21:58.97:0,59,474	0/0:19,1:21:13.38:0,13,283	0/0:20,0:20:41.92:0,42,345	0/0:37,0:38:99:0,102,837	1/1:5,23:28:66.16:696,66,0	1/1:5,14:20:20.32:396,20,0	1/1:1,26:26:66.17:704,66,0	0/0:26,0:27:64.91:0,65,521	0/0:25,0:26:67.93:0,68,544	0/0:24,1:25:39.93:0,40,534	0/0:15,0:14:34.18:0,34,274
chr10	75942592	.	C	CTTT	3160.55	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=3.140;DP=610;FS=0.447;HRun=11;HaplotypeScore=96.6151;InbreedingCoeff=0.9464;MQ=67.37;MQ0=3;MQRankSum=-2.328;QD=19.04;ReadPosRankSum=-0.898;VQSLOD=2.0589;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,1:40:55.90:458,56,0	0/0:12,0:12:33.08:0,33,382	0/0:18,0:15:14.78:0,15,138	0/0:9,0:9:1.11:0,1,57	0/0:22,0:25:55.40:0,55,628	0/0:22,0:23:60.09:0,60,683	0/0:14,0:14:33.08:0,33,383	0/0:26,0:26:57.04:0,57,645	1/1:14,8:24:46.84:701,47,0	0/0:21,0:21:48.03:0,48,540	0/0:17,0:17:32.99:0,33,382	1/1:4,10:15:11.78:225,12,0	1/1:10,17:29:39.38:619,39,0	0/0:16,0:16:27.04:0,27,316	0/0:31,0:31:62.97:0,63,734	0/0:16,0:18:34.29:0,34,417	0/0:28,0:30:84.03:0,84,926	0/0:25,0:24:23.81:0,24,568	0/0:28,0:29:62.72:0,63,647	0/0:29,0:30:58.56:0,59,691	0/0:18,0:18:32.57:0,33,359	1/1:11,10:23:40.24:541,40,0	1/1:3,14:19:33.11:607,33,0	1/1:3,11:15:14.86:203,15,0	0/0:20,0:21:50.74:0,51,555	0/0:23,0:24:57.03:0,57,643	0/0:22,0:22:39.17:0,39,443	0/0:11,0:10:30.09:0,30,350
chr10	75942743	.	TA	T	1683.52	PASS	AB=0.882;AC=13;AF=0.232;AN=56;BaseQRankSum=10.002;DP=562;FS=3.784;HRun=12;HaplotypeScore=62.9879;InbreedingCoeff=0.8487;MQ=74.90;MQ0=0;MQRankSum=-0.084;QD=13.91;ReadPosRankSum=3.546;VQSLOD=4.2946;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:69.05:0,69,677	0/0:14,0:14:36.06:0,36,357	0/0:15,0:14:15.49:0,15,144	0/0:14,0:13:6.91:0,7,108	0/0:20,0:22:59.86:0,60,565	0/0:29,3:32:11.43:0,11,646	0/0:16,1:17:21.19:0,21,372	0/0:29,1:30:42.77:0,43,560	1/1:0,19:20:49.85:377,50,0	0/0:24,0:24:60.05:0,60,591	0/0:23,1:24:36.86:0,37,543	1/1:0,17:17:44.72:348,45,0	1/1:2,18:20:50.80:395,51,0	0/0:17,0:17:42.06:0,42,415	0/0:26,0:27:62.92:0,63,614	0/0:17,0:18:50.92:0,51,490	0/0:26,1:27:54.89:0,55,727	0/1:11,2:15:7.73:8,0,264	0/0:13,0:13:26.86:0,27,239	0/0:16,2:20:4.44:0,4,383	0/0:23,3:27:16.44:0,16,491	1/1:4,17:21:44.78:348,45,0	1/1:4,15:19:32.75:255,33,0	1/1:2,7:9:17.92:139,18,0	0/0:19,0:19:54.05:0,54,525	0/0:23,1:25:33.70:0,34,499	0/0:16,1:18:21.69:0,22,387	0/0:7,0:7:9.02:0,9,91
chr10	75944684	.	GTA	G	707.99	PASS	AB=0.615;AC=27;AF=0.844;AN=32;BaseQRankSum=3.088;DP=160;FS=0.000;HRun=0;HaplotypeScore=32.9060;InbreedingCoeff=0.2617;MQ=72.17;MQ0=2;MQRankSum=-1.463;QD=7.78;ReadPosRankSum=1.824;VQSLOD=2.6453;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:2.99:0,3,24	./.	./.	./.	./.	1/1:0,1:1:3.01:34,3,0	./.	0/0:20,0:20:9.03:0,9,129	1/1:9,0:9:11.36:56,11,0	./.	./.	1/1:8,0:8:8.36:39,8,0	1/1:4,0:4:11.36:56,11,0	1/1:5,1:6:3.48:34,3,0	./.	./.	1/1:7,1:14:17.21:104,17,0	1/1:7,5:14:23.57:210,24,0	1/1:6,0:6:2.99:24,3,0	./.	./.	1/1:1,0:1:2.84:14,3,0	1/1:8,0:8:2.79:14,3,0	1/1:1,0:1:2.84:14,3,0	1/1:4,0:4:3:26,3,0	./.	1/1:2,3:6:5.85:48,6,0	0/1:3,3:8:24.93:142,0,25
chr10	75944701	.	TATATATATATATATATA	T	2000.18	PASS	AC=12;AF=0.273;AN=44;BaseQRankSum=3.172;DP=131;FS=5.783;HRun=0;HaplotypeScore=70.7805;InbreedingCoeff=0.5825;MQ=63.07;MQ0=4;MQRankSum=-5.771;QD=58.83;ReadPosRankSum=3.443;VQSLOD=2.2581;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:1:3.01:0,3,212	./.	0/0:8,0:2:5.61:0,6,49	0/0:12,0:5:11.84:0,12,199	./.	0/0:2,0:2:6.02:0,6,242	./.	0/0:17,0:17:48.16:0,48,2304	1/1:0,7:7:12.04:614,12,0	0/0:2,0:2:6.02:0,6,254	0/0:1,0:1:3.01:0,3,50	1/1:1,5:6:12:477,12,0	1/1:1,7:8:12.04:591,12,0	0/0:2,0:2:6.02:0,6,344	./.	./.	0/0:15,0:15:36.12:0,36,1471	0/0:17,0:16:48.15:0,48,2516	0/0:1,0:1:3.01:0,3,201	./.	0/0:2,0:2:6.02:0,6,316	1/1:1,2:2:3.01:154,3,0	1/1:0,9:9:2.20:152,2,0	1/1:0,1:1:3.01:154,3,0	0/0:3,0:3:6.02:0,6,332	0/0:2,0:2:6.02:0,6,302	0/0:4,0:4:6.02:0,6,350	0/0:8,0:8:24.08:0,24,1519
chr10	75945131	.	AGT	A	132.47	PASS	AB=0.880;AC=10;AF=0.179;AN=56;BaseQRankSum=4.096;DP=653;FS=2.408;HRun=0;HaplotypeScore=89.2443;InbreedingCoeff=-0.2276;MQ=65.54;MQ0=6;MQRankSum=0.201;QD=0.67;ReadPosRankSum=0.124;VQSLOD=1.7052;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:54.06:0,54,503	0/1:2,2:4:59.92:60,0,84	0/0:29,0:15:27.07:0,27,374	0/0:23,0:19:22.40:0,22,287	0/1:26,3:29:2.73:3,0,936	0/0:21,0:21:12.78:0,13,684	0/1:13,2:15:32.83:33,0,487	0/0:38,0:38:21.24:0,21,804	0/0:21,1:22:15.23:0,15,705	0/1:22,2:24:14.74:15,0,710	0/0:19,1:19:6.16:0,6,580	0/0:18,0:18:39.13:0,39,623	0/1:21,2:23:14.72:15,0,751	0/0:20,0:20:21.21:0,21,827	0/0:25,2:27:0.28:0,0,982	0/1:27,3:29:41.67:42,0,843	0/1:19,2:21:20.76:21,0,669	0/1:19,2:21:23.66:24,0,615	0/0:18,0:18:27.08:0,27,407	0/1:22,3:25:44.73:45,0,801	0/0:23,0:23:63.19:0,63,978	0/0:17,0:17:33.11:0,33,528	0/0:24,0:24:57.19:0,57,911	0/0:19,0:19:36.12:0,36,573	0/0:22,0:21:42.14:0,42,670	0/0:35,2:37:12.31:0,12,1164	0/0:35,0:35:70.11:0,70,1302	0/1:6,1:7:14.91:15,0,264
chr10	75945151	.	T	TGC	842.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.538;DP=686;FS=2.917;HRun=0;HaplotypeScore=100.4550;InbreedingCoeff=0.9659;MQ=66.48;MQ0=9;MQRankSum=-1.770;QD=17.20;ReadPosRankSum=1.115;VQSLOD=3.6161;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,43:48:41.93:938,42,0	0/0:4,0:4:12.01:0,12,134	0/0:44,0:23:48.51:0,49,641	0/0:26,0:17:37.68:0,38,421	0/0:29,0:29:78.17:0,78,1024	0/0:19,0:19:57.11:0,57,751	0/0:18,0:18:54.01:0,54,625	0/0:28,0:28:75.16:0,75,917	0/0:26,0:26:63.10:0,63,785	0/0:27,0:27:66.09:0,66,810	0/0:18,0:18:48.12:0,48,639	0/0:22,0:22:57.11:0,57,719	0/0:23,0:23:66.12:0,66,845	0/0:23,0:23:69.15:0,69,909	0/0:28,0:28:84.19:0,84,1109	0/0:27,0:27:75.15:0,75,960	0/0:25,0:25:72.07:0,72,854	0/0:20,0:20:60.03:0,60,709	0/0:14,0:14:33.08:0,33,420	0/0:30,0:30:90.13:0,90,1085	0/0:29,0:29:84.06:0,84,1041	0/0:16,0:16:48.09:0,48,604	0/0:25,0:25:69.18:0,69,925	0/0:21,0:21:47.92:0,48,576	0/0:22,0:21:60.23:0,60,730	0/0:32,0:32:93.21:0,93,1202	0/0:34,0:34:96.13:0,96,1265	0/0:7,0:7:21.03:0,21,265
chr10	75945174	.	G	GGT	6462.89	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-10.220;DP=623;FS=5.319;HRun=0;HaplotypeScore=76.2858;InbreedingCoeff=0.9877;MQ=76.81;MQ0=3;MQRankSum=-2.989;QD=50.10;ReadPosRankSum=4.724;VQSLOD=5.7284;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:57.19:0,57,869	0/0:3,0:3:9.03:0,9,138	0/0:24,0:22:51.32:0,51,773	0/0:28,0:22:53.54:0,54,762	0/0:22,0:22:54.17:0,54,804	0/0:23,0:23:69.21:0,69,1029	0/0:18,0:18:51.16:0,51,759	0/0:28,0:28:81.26:0,81,1186	1/1:0,22:23:63.22:1216,63,0	0/0:22,0:22:66.16:0,66,944	0/0:15,0:15:42.14:0,42,643	1/1:1,23:24:60.21:1158,60,0	1/1:0,23:24:66.23:1257,66,0	0/0:24,0:24:72.23:0,72,1079	0/0:28,0:28:84.29:0,84,1283	0/0:26,1:27:23.32:0,23,1127	0/0:22,0:22:62.50:0,62,958	0/0:19,0:19:57.19:0,57,863	0/0:15,0:15:39.12:0,39,572	0/0:28,0:28:84.27:0,84,1252	0/0:31,0:31:84.26:0,84,1260	1/1:0,13:14:39.13:753,39,0	1/1:1,19:20:51.17:979,51,0	1/1:1,23:24:57.20:1101,57,0	0/0:17,0:17:51.17:0,51,781	0/0:18,0:18:54.17:0,54,803	0/0:30,0:30:90.29:0,90,1354	0/0:10,0:10:30.10:0,30,459
chr10	75947898	.	C	CTG	717.46	PASS	AB=0.799;AC=14;AF=0.269;AN=52;BaseQRankSum=-3.601;DP=574;FS=3.260;HRun=0;HaplotypeScore=82.2737;InbreedingCoeff=0.3817;MQ=68.69;MQ0=19;MQRankSum=1.304;QD=4.10;ReadPosRankSum=-1.016;VQSLOD=2.2667;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:20:3:26,3,0	0/0:9,0:7:12.03:0,12,130	./.	./.	0/1:8,6:14:43.80:77,0,44	0/0:15,0:18:8.69:0,9,60	0/0:17,0:17:6.01:0,6,65	0/0:27,0:27:5.78:0,6,32	1/1:13,7:21:12.93:180,13,0	0/1:22,0:23:35.82:36,0,38	0/0:23,0:21:15.04:0,15,163	1/1:15,4:19:3.01:45,3,0	1/1:4,6:10:15.05:223,15,0	0/0:20,0:22:20.22:0,20,172	0/0:14,0:14:20.99:0,21,206	0/0:20,0:22:11.86:0,12,111	0/0:31,0:36:31.74:0,32,282	0/0:22,0:24:11.59:0,12,91	0/0:22,0:21:7.48:0,7,76	0/0:22,0:24:36.21:0,36,344	0/0:23,0:25:11.86:0,12,112	1/1:9,2:11:3.01:45,3,0	0/1:18,5:22:26.60:39,0,27	0/1:16,12:30:14.46:205,0,14	0/0:16,0:17:17.88:0,18,177	0/0:21,0:20:8.60:0,9,91	0/0:25,0:25:12.03:0,12,130	0/0:2,0:2:5.85:0,6,46
chr10	75948520	.	C	CTCTT	2493.87	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=-1.756;DP=515;FS=0.000;HRun=0;HaplotypeScore=118.5731;InbreedingCoeff=0.7917;MQ=50.04;MQ0=11;MQRankSum=-1.462;QD=20.78;ReadPosRankSum=0.881;VQSLOD=3.0443;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:17:39.03:0,39,623	0/0:6,0:6:15.05:0,15,282	0/1:19,0:7:13.48:13,0,55	0/1:29,0:11:14.68:15,0,91	0/0:24,0:25:47.28:0,47,733	0/0:17,0:17:27.01:0,27,400	0/0:24,0:24:47.59:0,48,779	0/0:21,0:21:57.05:0,57,810	1/1:0,12:12:15.05:391,15,0	0/0:29,0:27:77.93:0,78,1281	0/0:19,0:18:39.10:0,39,694	1/1:1,11:12:15.01:355,15,0	1/1:1,10:12:21.07:577,21,0	0/0:22,0:22:50.59:0,51,923	0/0:23,0:23:59.73:0,60,1023	0/0:16,0:20:38.65:0,39,666	0/0:24,0:24:52.18:0,52,1174	0/0:11,0:11:33.02:0,33,524	0/0:22,0:21:63.06:0,63,1076	0/0:18,0:18:39.07:0,39,659	0/0:24,0:24:56.81:0,57,1090	1/1:1,8:9:9.03:214,9,0	1/1:1,12:14:24.04:598,24,0	1/1:1,12:13:23.98:518,24,0	0/0:13,0:13:17.79:0,18,289	0/0:28,0:28:81.05:0,81,1208	0/0:22,0:22:63.08:0,63,1126	0/0:9,0:9:23.98:0,24,361
chr10	75948560	.	T	TGGTG	362.86	PASS	AB=0.990;AC=17;AF=0.315;AN=54;BaseQRankSum=5.188;DP=369;FS=10.150;HRun=0;HaplotypeScore=103.7434;InbreedingCoeff=0.3249;MQ=42.91;MQ0=3;MQRankSum=-5.786;QD=2.56;ReadPosRankSum=1.017;VQSLOD=1.0755;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:1.42:1,0,18	0/0:6,0:6:2.11:0,2,57	0/0:20,0:8:21.06:0,21,320	0/0:9,0:3:3.01:0,3,59	0/0:21,0:21:11.18:0,11,164	0/0:18,0:18:1.70:0,2,57	0/0:17,0:17:11.45:0,11,116	0/1:6,0:5:14.43:14,0,107	1/1:4,2:6:6:73,6,0	0/1:12,0:12:21.33:21,0,90	0/1:18,0:17:8.12:8,0,194	1/1:14,0:15:13.20:109,13,0	1/1:7,1:8:6.96:84,7,0	0/0:14,0:14:9.16:0,9,218	1/1:19,0:19:4.69:15,5,0	0/0:13,0:12:5.40:0,5,118	0/0:16,0:16:25.40:0,25,434	0/0:5,0:5:2.29:0,2,108	0/0:18,0:18:26.65:0,27,368	0/0:10,0:10:1.78:0,2,108	0/0:11,0:11:13.13:0,13,214	1/1:8,1:9:6.91:97,7,0	1/1:10,2:12:6.79:19,7,0	./.	0/0:15,0:15:3.89:0,4,89	0/1:22,0:21:81.28:81,0,206	0/0:15,0:15:23.03:0,23,286	0/0:13,0:13:30.91:0,31,232
chr10	75949116	.	GGTGTGTGTGTGTGT	G	1308.60	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=5.996;DP=541;FS=5.577;HRun=0;HaplotypeScore=176.3644;InbreedingCoeff=0.7780;MQ=66.67;MQ0=15;MQRankSum=-4.583;QD=11.90;ReadPosRankSum=0.586;VQSLOD=2.0657;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:31:15.05:0,15,474	0/0:5,0:5:12.04:0,12,472	0/0:29,0:21:6.02:0,6,88	./.	./.	0/0:19,0:19:15.05:0,15,761	0/0:20,0:20:18.53:0,19,640	0/0:23,0:23:17.05:0,17,297	1/1:11,5:17:12.04:389,12,0	0/0:20,0:19:27.09:0,27,1406	0/0:15,0:15:12.04:0,12,507	1/1:11,8:20:17.99:602,18,0	1/1:13,0:16:3.01:98,3,0	0/0:11,0:10:9.03:0,9,490	0/0:18,0:18:24.08:0,24,1281	0/0:10,0:11:18.04:0,18,788	0/0:18,0:21:29.31:0,29,1202	0/0:19,0:19:30.95:0,31,1373	0/0:16,0:15:14.26:0,14,407	0/0:21,0:23:28.82:0,29,1531	0/0:51,0:50:36.08:0,36,1477	1/1:14,0:13:3.46:25,3,0	1/1:15,5:19:6.02:231,6,0	1/1:15,5:22:3.12:118,3,0	0/0:15,0:17:30.10:0,30,1730	0/0:13,0:13:7.84:0,8,211	0/0:15,0:15:24.05:0,24,1169	0/0:13,0:11:18.95:0,19,1183
chr10	75949974	.	C	CT	1711.92	PASS	AB=0.853;AC=13;AF=0.232;AN=56;BaseQRankSum=-5.875;DP=524;FS=1.611;HRun=9;HaplotypeScore=53.3695;InbreedingCoeff=0.7412;MQ=76.32;MQ0=0;MQRankSum=1.517;QD=12.97;ReadPosRankSum=2.072;VQSLOD=3.2134;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:27:38.83:0,39,566	0/0:9,0:10:26.03:0,26,214	0/1:18,0:17:6.04:6,0,132	0/1:19,0:13:5.18:5,0,70	0/0:27,0:27:53.97:0,54,468	0/0:19,0:19:24.47:0,24,363	0/0:9,0:9:23.99:0,24,208	0/0:36,0:36:44.22:0,44,478	1/1:2,15:17:36.10:398,36,0	0/0:16,0:16:41.99:0,42,365	0/0:17,0:17:47.97:0,48,411	1/1:3,11:14:27.03:285,27,0	1/1:6,8:14:18:185,18,0	0/0:17,0:17:35.96:0,36,309	0/0:12,0:12:32.99:0,33,286	0/0:20,0:20:55.81:0,56,474	0/0:23,0:23:56.93:0,57,484	0/0:23,1:24:35.80:0,36,539	0/0:22,0:22:56.72:0,57,478	0/0:19,0:20:43.95:0,44,366	0/0:7,0:7:14.98:0,15,130	0/1:4,15:19:9.99:354,0,10	1/1:2,12:15:32.92:346,33,0	1/1:4,10:15:29.91:313,30,0	0/0:16,0:16:44.99:0,45,391	0/0:26,0:25:65.96:0,66,568	0/0:30,0:30:62.95:0,63,546	0/0:14,0:14:38.97:0,39,334
chr10	75953702	.	ATCTCTC	A	711.36	PASS	AB=1.000;AC=19;AF=0.432;AN=44;BaseQRankSum=1.309;DP=503;FS=39.581;HRun=0;HaplotypeScore=93.6453;InbreedingCoeff=0.0945;MQ=72.44;MQ0=18;MQRankSum=1.654;QD=3.39;ReadPosRankSum=3.456;VQSLOD=-0.0542;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:5.27:81,5,0	0/0:10,0:10:6.02:0,6,174	./.	./.	0/0:20,0:20:3.01:0,3,87	0/0:23,0:22:3.81:0,4,19	0/1:18,0:17:42.12:42,0,46	0/0:32,0:29:1.55:0,2,4	1/1:17,0:17:12.04:205,12,0	0/0:16,0:15:15.05:0,15,353	./.	1/1:14,2:16:6.01:68,6,0	1/1:16,0:15:3.01:47,3,0	0/1:20,0:20:2.95:3,0,175	0/1:16,0:15:43.27:43,0,113	0/0:19,0:19:10.17:0,10,201	0/1:8,0:8:10.53:11,0,129	1/1:11,0:10:3.45:22,3,0	0/0:12,0:12:3.01:0,3,51	0/0:27,0:25:3.01:0,3,91	0/0:25,0:23:5.90:0,6,41	1/1:12,0:13:6.02:109,6,0	./.	0/1:18,0:16:7.89:144,0,8	./.	0/1:16,0:15:62.55:63,0,216	0/1:19,0:17:12.59:13,0,90	./.
chr10	75953921	.	G	GAA	1295.65	PASS	AB=0.778;AC=15;AF=0.268;AN=56;BaseQRankSum=0.441;DP=486;FS=0.503;HRun=12;HaplotypeScore=74.1023;InbreedingCoeff=0.4724;MQ=76.19;MQ0=3;MQRankSum=0.704;QD=8.36;ReadPosRankSum=-0.036;VQSLOD=1.0142;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:44.89:0,45,416	0/0:4,0:6:14.48:0,14,107	0/0:30,0:20:16.86:0,17,180	0/1:16,0:13:10.75:11,0,39	0/0:22,0:24:35.92:0,36,462	0/1:6,0:11:3.77:4,0,95	0/1:13,1:15:3.32:3,0,270	0/0:29,0:33:27.57:0,28,505	1/1:1,12:13:18.02:230,18,0	0/1:14,0:18:12.13:12,0,189	0/0:16,0:20:17.11:0,17,223	1/1:5,9:16:20.04:227,20,0	1/1:2,11:14:23.57:301,24,0	0/1:9,0:11:27.03:27,0,183	0/0:10,0:10:23.99:0,24,217	0/0:12,0:12:20.90:0,21,194	0/0:20,0:21:41.82:0,42,433	0/0:12,0:14:29.68:0,30,309	0/0:16,0:19:32.12:0,32,319	0/0:22,1:23:11.87:0,12,425	0/0:15,0:15:29.89:0,30,324	0/1:1,10:12:3.70:257,0,4	0/1:7,13:23:0.82:283,0,1	1/1:3,2:6:9.02:113,9,0	0/0:17,0:21:43.99:0,44,415	0/0:15,0:18:19.63:0,20,256	0/0:14,0:16:32.44:0,32,273	0/0:20,0:24:46.92:0,47,422
chr10	75954877	.	AAG	A	2251.02	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.895;DP=520;FS=8.189;HRun=0;HaplotypeScore=65.5019;InbreedingCoeff=0.9541;MQ=58.88;MQ0=9;MQRankSum=1.997;QD=22.74;ReadPosRankSum=3.484;VQSLOD=3.6996;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:52:99:0,129,1862	0/0:10,0:10:23.98:0,24,337	0/0:8,0:5:14.94:0,15,137	0/0:6,0:4:2.03:0,2,20	0/0:21,0:21:59.39:0,59,787	0/0:20,0:20:57.08:0,57,826	0/0:16,0:16:39.11:0,39,572	0/0:23,0:21:57.13:0,57,791	1/1:6,10:16:47.59:533,48,0	0/0:23,0:23:60.08:0,60,872	0/0:14,0:13:20.56:0,21,339	1/1:0,11:11:21.07:281,21,0	1/1:0,19:18:29.63:379,30,0	0/0:26,0:26:72.06:0,72,1001	0/0:15,0:15:42.09:0,42,596	0/0:11,0:11:26.98:0,27,386	0/0:34,0:34:86.55:0,87,1191	0/0:15,0:15:45.10:0,45,666	0/0:29,0:29:81.18:0,81,1101	0/0:18,0:18:48.10:0,48,659	0/0:12,0:12:26.53:0,27,384	1/1:1,14:15:35.95:402,36,0	1/1:0,14:14:29.98:360,30,0	1/1:2,22:21:36.12:482,36,0	0/0:14,0:13:27.92:0,28,418	0/0:19,0:19:54:0,54,675	0/0:23,0:22:65.99:0,66,948	0/0:11,0:10:30:0,30,348
chr10	75955422	.	G	GA	1222.65	PASS	AB=0.780;AC=14;AF=0.269;AN=52;BaseQRankSum=0.985;DP=470;FS=3.919;HRun=9;HaplotypeScore=92.7449;InbreedingCoeff=0.7709;MQ=45.73;MQ0=29;MQRankSum=-4.157;QD=10.45;ReadPosRankSum=-0.648;VQSLOD=2.7008;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,13:27:24.54:260,25,0	0/0:5,0:5:5.98:0,6,52	./.	./.	0/0:22,0:22:35.13:0,35,311	0/0:16,0:16:17.97:0,18,153	0/0:21,0:21:29.54:0,30,249	0/0:27,0:27:47.79:0,48,407	1/1:6,5:8:18.02:178,18,0	0/0:20,0:20:37.81:0,38,303	0/0:14,0:12:14.94:0,15,125	1/1:1,5:7:15.04:162,15,0	1/1:7,5:12:27.02:276,27,0	0/0:16,0:16:23.26:0,23,251	0/1:12,2:14:10.14:10,0,138	0/0:14,0:13:17.62:0,18,155	0/0:23,0:21:23.80:0,24,203	0/0:18,0:18:19.38:0,19,145	0/0:22,0:20:19.47:0,19,246	0/0:26,0:24:38.49:0,38,325	0/0:16,0:8:11.99:0,12,104	1/1:2,9:11:27.07:291,27,0	1/1:7,5:10:12.03:130,12,0	0/1:10,9:16:11.16:98,0,11	0/0:19,0:19:26.96:0,27,233	0/0:27,0:26:27.80:0,28,279	0/0:26,0:27:55.17:0,55,464	0/0:9,0:8:11.97:0,12,101
chr10	75956623	.	TATAA	T	5453.92	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.864;DP=544;FS=5.820;HRun=0;HaplotypeScore=93.5840;InbreedingCoeff=0.9989;MQ=82.80;MQ0=0;MQRankSum=-2.708;QD=44.70;ReadPosRankSum=3.948;VQSLOD=5.0076;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.18:0,51,1375	0/0:8,0:8:24.08:0,24,648	0/0:13,0:13:33:0,33,706	0/0:19,0:19:54.14:0,54,1265	0/0:25,0:25:69.22:0,69,1792	0/0:22,0:22:60.21:0,60,1619	0/0:10,0:10:30.10:0,30,810	0/0:40,0:40:99:0,114,2884	1/1:1,23:24:60.21:1139,60,0	0/0:20,0:20:57.20:0,57,1495	0/0:15,0:15:45.15:0,45,1162	1/1:1,16:17:45.15:834,45,0	1/1:2,15:17:45.15:835,45,0	0/0:14,0:14:42.14:0,42,1124	0/0:24,0:24:72.23:0,72,1798	0/0:21,0:21:60.21:0,60,1591	0/0:18,0:18:51.18:0,51,1377	0/0:19,0:19:54.17:0,54,1392	0/0:23,0:23:69.23:0,69,1809	0/0:22,0:22:66.23:0,66,1753	0/0:12,0:12:36.12:0,36,955	1/1:1,18:19:48.12:840,48,0	1/1:2,28:30:75.21:1352,75,0	1/1:0,15:15:23.80:456,24,0	0/0:15,0:15:42.14:0,42,1134	0/0:24,0:24:66.23:0,66,1779	0/0:28,0:28:81.27:0,81,2106	0/0:12,0:12:36.12:0,36,972
chr10	75961864	.	C	CT	454.12	PASS	AB=0.913;AC=3;AF=0.054;AN=56;BaseQRankSum=-4.155;DP=604;FS=1.578;HRun=11;HaplotypeScore=62.9928;InbreedingCoeff=0.6056;MQ=73.25;MQ0=1;MQRankSum=-0.167;QD=10.09;ReadPosRankSum=-3.718;VQSLOD=2.0251;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,2:40:48.24:0,48,529	0/0:11,0:11:26.89:0,27,209	0/0:21,0:19:16.97:0,17,228	0/0:14,0:14:25.68:0,26,180	0/0:18,0:17:32.80:0,33,253	0/0:21,0:22:25.18:0,25,330	0/0:25,1:27:58.77:0,59,445	1/1:6,17:23:56.73:525,57,0	0/0:24,0:24:56.72:0,57,439	0/1:18,2:21:35.33:35,0,298	0/0:22,0:22:47.27:0,47,368	0/0:15,0:17:34.88:0,35,259	0/0:14,0:14:35.85:0,36,279	0/0:18,0:18:44.79:0,45,344	0/0:23,0:23:62.71:0,63,482	0/0:14,0:15:28.89:0,29,215	0/0:33,0:35:87.52:0,88,656	0/0:27,0:27:57.61:0,58,443	0/0:15,1:20:7.57:0,8,202	0/0:20,0:20:35.80:0,36,278	0/0:15,0:16:46.87:0,47,354	0/0:24,1:26:25.34:0,25,368	0/0:16,0:17:32.84:0,33,253	0/0:36,1:39:75.24:0,75,748	0/0:13,0:13:32.84:0,33,255	0/0:26,0:28:63.82:0,64,476	0/0:18,0:17:29.83:0,30,232	0/0:13,0:13:32.86:0,33,255
chr10	75962307	.	GTA	G	540.43	PASS	AB=0.910;AC=21;AF=0.656;AN=32;BaseQRankSum=0.621;DP=137;FS=2.794;HRun=0;HaplotypeScore=25.7460;InbreedingCoeff=0.1623;MQ=74.40;MQ0=5;MQRankSum=1.587;QD=5.40;ReadPosRankSum=0.676;VQSLOD=1.9896;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:2,0:2:3.01:0,3,46	0/1:6,0:3:0.01:0,0,0	0/0:17,0:8:0:0,0,0	./.	./.	./.	0/1:28,0:26:58.54:59,0,198	0/0:1,0:1:0:0,0,0	./.	1/1:2,0:2:3:25,3,0	./.	./.	./.	0/0:2,0:2:5.80:0,6,41	1/1:3,0:3:3.01:34,3,0	0/1:12,7:19:99:167,0,180	1/1:7,6:14:14.61:129,15,0	1/1:3,1:4:3.01:34,3,0	1/1:0,1:1:3.01:34,3,0	1/1:0,2:2:3.01:34,3,0	./.	./.	./.	1/1:4,0:4:2.97:20,3,0	./.	1/1:5,1:8:8.84:70,9,0	1/1:3,6:9:2.74:34,3,0
chr10	75963243	.	AGAACCTCTGGAAGAGCAGCCAGT	A	1864.21	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.828;DP=552;FS=21.334;HRun=0;HaplotypeScore=300.0257;InbreedingCoeff=0.8697;MQ=57.45;MQ0=5;MQRankSum=-5.773;QD=81.05;ReadPosRankSum=-0.057;VQSLOD=2.0511;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,15:23:36.12:1959,36,0	0/0:6,0:6:18.06:0,18,1594	0/0:11,0:3:9.03:0,9,273	0/0:17,0:6:18.05:0,18,515	0/0:22,0:22:66.23:0,66,6311	0/0:22,0:22:63.22:0,63,6271	0/0:24,0:24:72.25:0,72,6414	0/0:26,0:25:72.25:0,72,5575	0/0:34,0:34:99:0,102,9329	0/0:14,0:14:42.14:0,42,3546	0/0:11,0:11:33.11:0,33,2805	0/0:28,0:28:81.28:0,81,8320	0/0:24,0:24:72.25:0,72,7481	0/0:26,0:26:78.24:0,78,7283	0/0:36,0:36:99:0,105,10114	0/0:28,0:27:84.28:0,84,7892	0/0:28,0:28:84.27:0,84,8135	0/0:23,0:23:66.23:0,66,6477	0/0:16,0:14:42.14:0,42,3287	0/0:6,0:6:18.06:0,18,1698	0/0:20,0:20:57.18:0,57,5564	0/0:6,0:6:18.06:0,18,1975	0/0:4,0:4:9.03:0,9,865	0/0:24,0:24:66.23:0,66,6320	0/0:10,0:10:30.10:0,30,2956	0/0:19,0:19:54.17:0,54,5047	0/0:26,0:26:75.26:0,75,7520	0/0:18,0:18:54.19:0,54,5951
chr10	75963934	.	TACACAC	T	383.73	PASS	AB=0.783;AC=9;AF=0.167;AN=54;BaseQRankSum=6.889;DP=588;FS=1.881;HRun=0;HaplotypeScore=141.2255;InbreedingCoeff=0.5378;MQ=54.77;MQ0=12;MQRankSum=-3.705;QD=3.96;ReadPosRankSum=-2.478;VQSLOD=2.1361;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:30:24.11:0,24,345	0/0:12,0:13:36.12:0,36,856	0/0:28,0:12:2.92:0,3,17	./.	0/0:17,0:16:24.08:0,24,709	0/0:20,0:20:33.51:0,34,716	0/0:29,0:29:31.35:0,31,871	0/0:27,0:25:20.98:0,21,327	1/1:5,3:8:5.91:38,6,0	0/0:15,0:15:38.31:0,38,885	0/0:7,0:7:6.49:0,6,195	1/1:8,16:25:12.60:205,13,0	1/1:6,10:16:6.49:123,6,0	0/0:20,0:20:36.11:0,36,925	0/0:28,0:29:50.32:0,50,1278	0/0:18,0:18:29.98:0,30,727	0/0:23,0:26:32.56:0,33,941	0/1:13,0:13:11.76:12,0,578	0/0:13,0:11:18.06:0,18,429	0/0:21,0:22:27.08:0,27,724	0/0:42,0:42:72.20:0,72,1690	0/1:6,12:18:2.37:98,0,2	0/1:10,5:15:7.52:48,0,8	0/0:18,19:37:2.98:0,3,22	0/0:13,0:13:27.08:0,27,687	0/0:21,0:21:42.19:0,42,787	0/0:15,0:17:42.12:0,42,1165	0/0:14,0:15:30.10:0,30,820
chr10	75964177	.	TTTCTTCCC	T	828.44	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.450;DP=579;FS=6.617;HRun=0;HaplotypeScore=140.8224;InbreedingCoeff=0.9904;MQ=77.87;MQ0=0;MQRankSum=-5.639;QD=46.02;ReadPosRankSum=-1.084;VQSLOD=2.9772;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:18:33.11:923,33,0	0/0:12,0:12:36.12:0,36,1592	0/0:15,0:15:30.09:0,30,1123	0/0:14,0:14:36.12:0,36,1411	0/0:30,0:30:81.28:0,81,3550	0/0:29,0:29:84.29:0,84,3707	0/0:14,0:14:42.14:0,42,1729	0/0:42,0:42:99:0,120,4965	0/0:27,0:27:78.27:0,78,3353	0/0:29,0:29:72.25:0,72,3068	0/0:17,0:17:51.18:0,51,2229	0/0:21,0:21:63.22:0,63,2743	0/0:22,0:22:60.21:0,60,2641	0/0:19,0:19:57.20:0,57,2393	0/0:19,0:19:57.18:0,57,2419	0/0:21,0:21:60.21:0,60,2660	0/0:17,0:17:51.13:0,51,2145	0/0:13,0:13:39.13:0,39,1650	0/0:20,0:20:60.19:0,60,2363	0/0:31,0:31:93.31:0,93,3965	0/0:10,0:10:30.10:0,30,1330	0/0:21,0:21:63.22:0,63,2586	0/0:18,0:18:45.14:0,45,1853	0/0:13,0:13:39.13:0,39,1696	0/0:23,0:23:69.24:0,69,2923	0/0:36,0:36:99:0,102,4298	0/0:22,0:22:66.23:0,66,2839	0/0:6,0:6:18.06:0,18,796
chr10	75968625	.	G	GA	4482.56	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-13.131;DP=686;FS=6.878;HRun=9;HaplotypeScore=65.5995;InbreedingCoeff=0.9947;MQ=76.08;MQ0=0;MQRankSum=-0.464;QD=25.61;ReadPosRankSum=1.771;VQSLOD=5.5610;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:31:72.19:796,72,0	0/0:10,0:10:29.99:0,30,260	0/0:18,0:18:24.12:0,24,245	0/0:15,0:15:19.55:0,20,159	0/0:42,0:44:99:0,110,943	0/0:27,0:27:74.97:0,75,651	0/0:18,0:18:44.97:0,45,391	0/0:33,0:33:80.94:0,81,700	1/1:3,16:19:48.13:526,48,0	0/0:35,0:35:86.94:0,87,749	0/0:24,0:24:68.95:0,69,590	1/1:1,18:19:42.11:465,42,0	1/1:7,26:33:75.19:822,75,0	0/0:23,0:23:65.99:0,66,573	0/0:29,0:29:83.95:0,84,721	0/0:32,2:34:20.61:0,21,637	0/0:18,0:20:49.01:0,49,391	0/0:18,0:18:41.99:0,42,364	0/0:22,0:22:56.94:0,57,489	0/0:22,0:22:62.97:0,63,543	0/0:18,0:18:44.98:0,45,391	1/1:6,13:19:36.10:398,36,0	1/1:4,26:31:75.04:811,75,0	1/1:0,23:23:60.16:664,60,0	0/0:22,0:21:62.99:0,63,547	0/0:32,0:32:77.95:0,78,677	0/0:41,1:41:74.77:0,75,878	0/0:5,0:5:15:0,15,130
chr10	75975951	.	GA	G	1408.63	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.710;DP=825;FS=4.809;HRun=2;HaplotypeScore=76.4150;InbreedingCoeff=1.0000;MQ=85.12;MQ0=0;MQRankSum=-4.421;QD=31.30;ReadPosRankSum=2.648;VQSLOD=3.4283;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,44:45:99:1504,117,0	0/0:16,0:16:48.16:0,48,719	0/0:25,0:25:68.99:0,69,897	0/0:28,0:28:75.53:0,76,1006	0/0:28,0:28:84.26:0,84,1219	0/0:36,0:36:99:0,108,1499	0/0:25,0:25:75.23:0,75,1085	0/0:28,0:28:84.28:0,84,1241	0/0:30,0:30:90.29:0,90,1329	0/0:34,0:33:99:0,99,1468	0/0:26,0:26:78.22:0,78,1086	0/0:37,0:37:99:0,108,1618	0/0:20,0:20:60.18:0,60,842	0/0:31,0:31:93.32:0,93,1392	0/0:29,0:29:87.29:0,87,1302	0/0:17,0:17:51.16:0,51,746	0/0:26,0:26:78.23:0,78,1123	0/0:25,0:25:72.17:0,72,993	0/0:20,0:20:57.13:0,57,805	0/0:28,0:28:84.28:0,84,1240	0/0:37,0:37:96.12:0,96,1542	0/0:27,0:27:81.26:0,81,1176	0/0:39,0:39:99:0,117,1715	0/0:46,0:46:99:0,132,1857	0/0:30,0:29:90.25:0,90,1304	0/0:28,0:28:84.28:0,84,1257	0/0:38,0:38:99:0,111,1663	0/0:26,0:26:78.25:0,78,1149
chr10	75976343	.	GT	G	1756.84	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.814;DP=555;FS=4.344;HRun=1;HaplotypeScore=60.7359;InbreedingCoeff=0.9926;MQ=88.16;MQ0=0;MQRankSum=-3.804;QD=30.82;ReadPosRankSum=1.376;VQSLOD=3.3275;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.23:0,84,1134	0/0:6,0:6:18.03:0,18,236	0/0:24,0:22:38.09:0,38,791	0/0:21,0:21:21.96:0,22,507	0/0:15,0:15:42.06:0,42,537	0/0:20,0:20:57.15:0,57,776	0/0:25,0:25:75.20:0,75,1033	0/0:25,0:25:75.17:0,75,967	1/1:1,17:18:45.15:626,45,0	0/0:18,0:18:51.13:0,51,654	0/0:15,0:15:38.60:0,39,500	0/0:26,0:26:75.22:0,75,1021	0/0:14,0:14:42.14:0,42,608	0/0:17,0:17:51.14:0,51,699	0/0:28,0:28:81.22:0,81,1097	0/0:22,0:22:63.20:0,63,895	0/0:25,0:25:75.21:0,75,1042	0/0:15,0:15:45.13:0,45,633	0/0:12,0:12:36.06:0,36,420	0/0:22,0:22:63.18:0,63,869	0/0:40,0:40:99:0,117,1621	0/0:15,0:15:45.15:0,45,649	1/1:4,4:8:17.98:207,18,0	1/1:1,30:31:78.25:1066,78,0	0/0:15,0:15:42.14:0,42,581	0/0:27,0:27:78.22:0,78,1059	0/0:12,0:12:36.08:0,36,496	0/0:10,0:10:29.84:0,30,360
chr10	75978897	.	CAT	C	1557.60	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=15.100;DP=955;FS=2.273;HRun=0;HaplotypeScore=170.9787;InbreedingCoeff=0.4155;MQ=51.76;MQ0=28;MQRankSum=-5.270;QD=10.45;ReadPosRankSum=-2.997;VQSLOD=2.6702;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:34:60.26:0,60,1422	0/0:10,0:10:27.08:0,27,487	0/0:68,1:9:19.42:0,19,320	0/0:60,1:5:12.03:0,12,186	0/0:32,0:32:84.86:0,85,1629	0/0:38,2:40:80.13:0,80,1771	0/0:26,0:26:69.22:0,69,1277	0/0:42,0:41:99:0,113,1969	1/1:20,1:21:18.23:300,18,0	0/0:35,0:34:63.94:0,64,1629	0/0:20,0:20:60.17:0,60,1081	0/1:29,0:29:15.86:442,0,16	0/1:16,0:15:34.43:142,0,34	0/0:38,0:38:99:0,102,1820	0/0:38,0:38:99:0,111,1842	0/0:44,0:44:99:0,122,2110	0/0:24,0:24:60.12:0,60,1077	0/0:41,1:42:49.13:0,49,1876	0/0:21,0:15:45.14:0,45,785	0/0:29,0:29:87.29:0,87,1618	0/0:84,0:82:99:0,215,3681	1/1:23,0:23:52.99:361,53,0	0/1:21,0:21:18.70:276,0,19	0/1:39,0:39:99:184,0,108	0/0:23,0:23:69.23:0,69,1288	0/0:48,0:48:99:0,144,2433	0/0:24,0:24:72.21:0,72,1271	0/0:22,0:22:51.25:0,51,1196
chr10	75978899	.	TAC	T	3690.93	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.771;DP=957;FS=2.896;HRun=0;HaplotypeScore=164.8599;InbreedingCoeff=0.9784;MQ=51.71;MQ0=29;MQRankSum=-7.952;QD=25.11;ReadPosRankSum=-4.298;VQSLOD=3.0266;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:72.24:0,72,1209	0/0:10,0:10:27.09:0,27,459	0/0:68,0:8:9.99:0,10,238	0/0:57,2:4:9.03:0,9,141	0/0:32,0:32:93.14:0,93,1466	0/0:40,0:40:87.45:0,87,1529	0/0:26,0:26:69.24:0,69,1179	0/0:44,0:43:99:0,114,1790	1/1:6,15:21:38.47:544,38,0	0/0:36,0:34:73.73:0,74,1453	0/0:20,0:20:54.17:0,54,907	1/1:7,19:27:72.24:956,72,0	1/1:7,9:14:27.09:359,27,0	0/0:39,0:39:96.27:0,96,1553	0/0:39,0:39:96.31:0,96,1583	0/0:43,1:44:99:0,108,1823	0/0:24,0:24:54.18:0,54,906	0/0:39,0:39:87.40:0,87,1720	0/0:21,0:15:42.14:0,42,700	0/0:30,0:30:90.29:0,90,1514	0/0:83,1:83:99:0,189,3135	1/1:4,18:22:52.05:680,52,0	1/1:4,17:21:48.06:638,48,0	1/1:20,18:40:38.92:513,39,0	0/0:23,0:23:69.22:0,69,1159	0/0:50,0:50:99:0,126,2112	0/0:24,0:24:66.19:0,66,1076	0/0:23,0:23:54.70:0,55,1078
chr10	75978927	.	GACAC	G	1419.60	PASS	AB=0.658;AC=11;AF=0.196;AN=56;BaseQRankSum=12.928;DP=930;FS=0.464;HRun=0;HaplotypeScore=218.9142;InbreedingCoeff=0.8832;MQ=50.86;MQ0=29;MQRankSum=-11.287;QD=9.66;ReadPosRankSum=-8.065;VQSLOD=0.6110;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:43.04:0,43,905	0/0:10,0:10:27.09:0,27,640	0/0:42,0:4:8.88:0,9,93	0/0:51,0:9:24.07:0,24,444	0/0:33,0:33:95.51:0,96,2119	0/0:38,0:38:87.30:0,87,2148	0/0:31,0:31:84.29:0,84,1943	0/0:56,0:54:99:0,147,3265	0/1:12,13:25:4.57:300,0,5	0/0:37,0:35:93.59:0,94,2001	0/0:16,0:16:45.14:0,45,1033	1/1:12,18:30:58.30:408,58,0	1/1:11,10:18:18.89:301,19,0	0/0:43,0:42:99:0,104,2218	0/0:33,0:33:84.01:0,84,1951	0/0:44,1:45:99:0,115,2517	0/0:28,0:28:57.10:0,57,1178	0/0:42,0:42:99:0,114,2389	0/0:17,0:14:33.11:0,33,799	0/0:31,0:31:81.07:0,81,1763	0/0:80,0:78:99:0,177,3851	1/1:5,15:19:35.54:300,36,0	1/1:5,16:21:14.49:225,14,0	1/1:15,15:30:7.99:59,8,0	0/0:24,0:23:69.22:0,69,1616	0/0:50,0:48:99:0,126,3248	0/0:23,0:23:69.05:0,69,1572	0/0:27,0:27:53.39:0,53,1192
chr10	75978961	.	T	TACACACAC	1448.89	PASS	AB=0.978;AC=16;AF=0.308;AN=52;BaseQRankSum=1.539;DP=860;FS=6.091;HRun=0;HaplotypeScore=254.7946;InbreedingCoeff=0.6336;MQ=52.14;MQ0=25;MQRankSum=-5.887;QD=5.21;ReadPosRankSum=-4.906;VQSLOD=1.2277;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:15,9:30:9.03:318,9,0	0/0:15,0:15:20.27:0,20,406	./.	./.	0/0:32,0:34:10.47:0,10,832	0/0:26,0:29:35.94:0,36,577	0/0:27,0:30:39.03:0,39,756	0/1:44,0:42:32.97:33,0,142	1/1:14,12:30:2.95:123,3,0	0/0:31,0:31:33.59:0,34,931	0/0:9,0:9:12.04:0,12,274	1/1:14,15:33:15.05:439,15,0	1/1:20,0:28:24.55:534,25,0	0/0:37,0:40:42.81:0,43,985	0/0:32,0:34:28.08:0,28,1132	0/0:40,0:41:52.17:0,52,1531	0/0:21,0:28:31.35:0,31,745	0/0:33,0:34:26.33:0,26,638	0/0:17,0:19:5.91:0,6,241	0/1:19,0:22:14.26:14,0,589	0/0:62,0:64:87.12:0,87,1690	1/1:17,7:27:3.01:123,3,0	1/1:17,7:24:0.89:4,1,0	1/1:18,10:34:3.35:25,3,0	0/0:19,0:19:29.91:0,30,544	0/0:41,0:42:32.18:0,32,748	0/0:21,0:21:29.97:0,30,617	0/0:9,0:14:24.06:0,24,475
chr10	75981876	.	TTTTTG	T	1204.29	PASS	AC=14;AF=0.269;AN=52;BaseQRankSum=7.250;DP=437;FS=3.038;HRun=0;HaplotypeScore=49.2939;InbreedingCoeff=0.8195;MQ=30.65;MQ0=177;MQRankSum=-0.276;QD=13.09;ReadPosRankSum=1.949;VQSLOD=2.1954;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:26:24.90:261,25,0	0/0:7,0:6:14.98:0,15,355	./.	./.	0/0:17,0:10:15.05:0,15,379	0/0:12,0:10:6.02:0,6,169	0/0:16,0:7:8.62:0,9,178	0/0:25,0:10:9.03:0,9,253	1/1:3,7:4:6.02:109,6,0	0/0:14,0:10:27.09:0,27,758	0/0:24,0:12:14.97:0,15,353	1/1:6,5:8:5.16:107,5,0	1/1:4,7:8:11.72:218,12,0	0/0:17,0:13:24.08:0,24,605	0/0:8,0:7:0:0,0,0	0/0:9,0:5:8.96:0,9,187	0/0:20,0:12:30.10:0,30,842	0/0:13,0:5:6.02:0,6,120	0/0:19,0:9:20.94:0,21,514	0/0:20,0:11:24.01:0,24,472	0/0:23,0:10:21:0,21,524	1/1:2,8:7:12.04:191,12,0	1/1:4,4:6:9.03:164,9,0	1/1:4,10:11:18.06:328,18,0	0/0:15,0:10:27.09:0,27,669	0/0:15,0:11:30.10:0,30,802	0/0:19,0:12:17.80:0,18,437	0/0:15,0:9:15.05:0,15,411
chr10	75981878	.	TTTGTTTTG	T	574.28	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=2.225;DP=431;FS=2.215;HRun=0;HaplotypeScore=63.4090;InbreedingCoeff=0.5645;MQ=31.00;MQ0=176;MQRankSum=-4.429;QD=20.51;ReadPosRankSum=0.897;VQSLOD=2.1788;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,22:26:31.07:668,31,0	0/0:7,0:6:15.05:0,15,585	./.	./.	0/0:17,0:10:15.05:0,15,599	0/0:10,0:8:9.03:0,9,285	0/0:14,0:6:15.04:0,15,384	0/0:24,0:9:23.22:0,23,601	0/0:10,0:4:7.45:0,7,65	0/0:14,0:10:30.10:0,30,1201	0/0:22,0:10:15.05:0,15,581	0/0:11,0:8:9.25:0,9,50	0/0:11,0:8:8.87:0,9,30	0/0:15,0:12:23.77:0,24,950	0/0:8,0:7:3.48:0,3,33	0/0:9,0:5:9.03:0,9,332	0/0:21,0:13:33.11:0,33,1325	0/0:13,0:5:6.02:0,6,212	0/0:18,0:9:27.09:0,27,899	0/0:19,0:11:30.10:0,30,938	0/0:23,0:10:21.07:0,21,815	0/0:9,0:7:13.32:0,13,99	0/0:8,0:6:12.68:0,13,103	0/0:14,0:11:19.34:0,19,122	0/0:14,0:10:27.09:0,27,1053	0/0:15,0:11:33.11:0,33,1274	0/0:22,0:15:29.70:0,30,955	0/0:15,0:9:18.06:0,18,673
chr10	75982235	.	AC	A	630.98	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.098;DP=534;FS=0.837;HRun=1;HaplotypeScore=67.4008;InbreedingCoeff=0.9093;MQ=68.12;MQ0=11;MQRankSum=-2.711;QD=24.27;ReadPosRankSum=0.735;VQSLOD=3.5854;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:57.11:726,57,0	0/0:8,0:8:24.08:0,24,310	0/0:48,0:19:13.18:0,13,174	0/0:38,0:13:8.67:0,9,97	0/0:23,0:23:66.17:0,66,809	0/0:11,0:11:33.08:0,33,403	0/0:11,0:11:33.06:0,33,390	0/0:36,0:35:96:0,96,1062	0/0:14,0:14:41.99:0,42,472	0/0:25,0:25:66.63:0,67,797	0/0:24,0:24:72.01:0,72,833	0/0:13,0:13:33.03:0,33,367	0/0:9,0:9:25.30:0,25,284	0/0:15,0:14:42.06:0,42,468	0/0:8,0:8:24.06:0,24,295	0/0:13,0:13:39.10:0,39,472	0/0:31,0:29:89.49:0,89,1072	0/0:24,0:24:64.51:0,65,687	0/0:20,0:19:57.15:0,57,684	0/0:8,0:8:24.08:0,24,303	0/0:16,0:16:48.04:0,48,569	0/0:8,0:8:21.03:0,21,248	0/0:12,0:12:33.08:0,33,410	0/0:12,0:12:33.09:0,33,402	0/0:17,0:17:43.01:0,43,467	0/0:28,0:28:84.23:0,84,1031	0/0:21,0:21:60.09:0,60,689	0/0:15,0:15:44.98:0,45,540
chr10	75982243	.	CA	C	866.87	PASS	AB=0.919;AC=16;AF=0.286;AN=56;BaseQRankSum=7.713;DP=538;FS=13.825;HRun=12;HaplotypeScore=71.4801;InbreedingCoeff=0.7518;MQ=72.21;MQ0=11;MQRankSum=0.199;QD=6.28;ReadPosRankSum=0.937;VQSLOD=0.6978;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:31:43.35:141,43,0	0/1:6,0:8:10.30:10,0,107	0/0:51,1:24:10.76:0,11,110	0/1:36,1:13:22.49:22,0,60	0/0:24,0:25:43.24:0,43,583	0/0:13,0:13:35.83:0,36,338	0/0:9,0:11:29.73:0,30,272	0/0:30,3:32:4.32:0,4,542	1/1:2,12:14:29.77:232,30,0	0/0:20,0:23:35.04:0,35,400	0/0:20,0:20:33.14:0,33,377	1/1:4,5:10:10.97:76,11,0	1/1:3,5:8:14.93:116,15,0	0/0:13,0:13:6.76:0,7,235	0/0:10,0:10:4.11:0,4,221	0/0:14,1:15:21.82:0,22,384	0/0:31,1:31:31.65:0,32,645	0/0:22,1:23:24.78:0,25,420	0/0:20,1:22:30.13:0,30,441	0/0:9,0:9:23.97:0,24,226	0/0:18,0:19:23.56:0,24,385	1/1:0,5:7:19.02:128,19,0	1/1:2,7:10:22.96:168,23,0	1/1:2,9:12:22.95:168,23,0	0/0:15,0:17:35.90:0,36,344	0/0:23,2:25:13.63:0,14,492	0/0:19,0:19:47.75:0,48,456	0/0:12,0:15:35.91:0,36,349
chr10	75982800	.	CTTTCTTTT	C	1089.59	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-0.123;DP=400;FS=0.000;HRun=0;HaplotypeScore=101.2581;InbreedingCoeff=0.7632;MQ=65.57;MQ0=7;MQRankSum=0.982;QD=12.97;ReadPosRankSum=0.242;VQSLOD=2.2394;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:19:3.22:144,3,0	0/0:7,0:6:18.05:0,18,464	0/0:25,0:11:28.57:0,29,303	0/0:25,0:9:14.49:0,14,142	0/0:21,0:19:27.93:0,28,633	0/0:14,0:14:18.25:0,18,597	0/0:10,0:10:24.04:0,24,470	0/0:32,0:32:86.73:0,87,1058	1/1:16,0:16:28.15:465,28,0	0/0:12,0:12:24.05:0,24,533	0/0:14,0:13:26.99:0,27,665	0/1:11,0:11:40.22:93,0,40	1/1:7,0:7:3.34:101,3,0	0/0:13,0:13:20.16:0,20,549	0/0:8,0:8:14.20:0,14,189	0/0:11,0:11:27.07:0,27,691	0/0:17,0:16:35.60:0,36,289	0/0:13,0:13:30:0,30,771	0/0:24,0:23:54.09:0,54,849	0/0:5,0:5:12:0,12,167	0/0:8,0:8:17.97:0,18,148	1/1:6,0:6:7.09:76,7,0	1/1:2,9:11:5.42:38,5,0	1/1:14,0:13:33.01:339,33,0	0/0:15,0:15:38.62:0,39,683	0/0:17,0:16:35.55:0,36,823	0/0:20,0:20:51.08:0,51,1121	0/0:5,0:5:14.99:0,15,255
chr10	75982804	.	C	CT	125.86	PASS	AB=0.980;AC=23;AF=0.411;AN=56;BaseQRankSum=4.226;DP=456;FS=4.425;HRun=17;HaplotypeScore=98.9345;InbreedingCoeff=-0.1027;MQ=57.60;MQ0=12;MQRankSum=0.996;QD=0.39;ReadPosRankSum=-2.360;VQSLOD=-0.5777;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:4.59:11,5,0	0/1:7,0:6:6.58:7,0,12	0/0:24,0:10:3.78:0,4,16	0/0:23,0:7:3.25:0,3,16	0/1:22,0:21:10.89:11,0,24	0/1:17,0:17:9.68:10,0,15	0/1:11,0:11:13.16:17,0,13	0/1:40,0:40:10.67:36,0,11	1/1:13,0:13:0.35:2,0,0	0/1:20,0:20:5.49:5,0,34	0/1:11,8:18:19.06:19,0,21	1/1:7,0:7:5.27:25,5,0	0/1:8,0:8:0:1,0,0	0/0:17,0:17:1.57:0,2,40	0/0:8,0:8:4.58:0,5,19	0/0:10,0:10:20.07:0,20,90	0/1:27,0:26:0.16:2,0,0	0/1:14,0:13:22.48:26,0,22	0/1:27,0:25:42.36:42,0,50	0/0:7,0:6:2.39:0,2,8	0/0:10,0:9:4.08:0,4,18	1/1:4,0:4:0.47:1,0,0	0/1:10,0:10:0:0,0,0	0/1:11,0:10:0.01:0,0,0	0/0:22,0:22:5.95:0,6,33	0/1:21,0:20:4.11:4,0,61	0/1:21,0:21:26.83:34,0,27	0/0:15,0:12:2.72:0,3,21
chr10	75982887	.	A	AT	1172.41	PASS	AB=0.817;AC=13;AF=0.232;AN=56;BaseQRankSum=-2.369;DP=362;FS=2.653;HRun=11;HaplotypeScore=57.6533;InbreedingCoeff=0.6697;MQ=68.57;MQ0=0;MQRankSum=0.177;QD=10.96;ReadPosRankSum=-2.365;VQSLOD=2.4726;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:15:18.30:0,18,53	0/0:7,0:7:20.91:0,21,160	0/1:12,0:12:31.49:32,0,31	0/0:12,0:13:12.14:0,12,108	0/0:18,0:19:46.84:0,47,354	0/0:16,0:16:39.89:0,40,292	0/0:18,0:19:46.75:0,47,345	0/1:19,2:22:1.66:2,0,194	1/1:2,7:10:21:202,21,0	0/0:29,1:29:41.32:0,41,500	0/0:11,0:12:31.91:0,32,238	1/1:2,6:8:15.03:152,15,0	1/1:3,9:13:6.82:249,7,0	0/0:12,0:13:18.17:0,18,181	0/0:8,0:9:16.94:0,17,122	0/0:2,0:3:8.01:0,8,52	0/0:11,0:12:31.67:0,32,238	0/0:9,0:10:5.37:0,5,148	0/0:12,0:12:23.85:0,24,182	0/0:7,0:7:17.91:0,18,137	0/0:6,0:6:14.94:0,15,116	1/1:1,13:14:26.14:261,26,0	0/1:2,13:15:2.19:162,0,2	1/1:2,10:12:9.83:281,10,0	0/0:13,0:14:34.75:0,35,251	0/0:12,0:13:31.91:0,32,238	0/0:14,1:17:3.49:0,3,190	0/0:6,0:8:15.91:0,16,97
chr10	75983184	.	GTT	G	881.64	PASS	AB=0.706;AC=13;AF=0.232;AN=56;BaseQRankSum=7.129;DP=585;FS=6.517;HRun=18;HaplotypeScore=90.8923;InbreedingCoeff=0.5944;MQ=61.92;MQ0=3;MQRankSum=1.655;QD=5.44;ReadPosRankSum=4.512;VQSLOD=-0.6230;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,21:28:49.82:373,50,0	0/0:8,0:9:19.27:0,19,161	0/0:34,0:7:8.20:0,8,60	0/0:32,0:17:12.69:0,13,86	0/0:23,0:21:34.58:0,35,268	0/0:21,0:21:36.10:0,36,305	0/0:15,0:16:1.72:0,2,172	0/0:32,1:36:13.51:0,14,279	0/1:6,14:21:3.45:61,0,3	0/0:29,1:30:11.96:0,12,416	0/0:18,0:18:17.85:0,18,159	1/1:13,3:16:20.91:126,21,0	1/1:6,11:19:5.24:70,5,0	0/0:8,0:12:14.46:0,14,108	0/0:21,0:28:61.70:0,62,532	0/0:10,0:12:20.89:0,21,220	0/0:14,1:19:4.04:0,4,366	0/0:13,1:14:7.48:0,7,245	0/0:24,1:27:22.16:0,22,452	0/0:18,0:18:30.82:0,31,285	0/0:13,0:13:16.34:0,16,158	0/1:8,6:15:15.21:106,0,15	1/1:5,9:13:7.81:62,8,0	1/1:15,9:26:25.30:243,25,0	0/0:17,0:19:34.68:0,35,319	0/1:19,2:23:10.01:10,0,228	0/0:16,1:23:13.01:0,13,324	0/0:11,0:13:10.60:0,11,98
chr10	75983303	.	AAGAGAGAGAGAG	A	986.72	PASS	AB=0.801;AC=9;AF=0.173;AN=52;BaseQRankSum=4.888;DP=513;FS=16.125;HRun=0;HaplotypeScore=165.7665;InbreedingCoeff=0.4984;MQ=59.23;MQ0=12;MQRankSum=-3.155;QD=9.58;ReadPosRankSum=-0.136;VQSLOD=1.6307;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:34.42:0,34,723	0/0:11,0:11:12.50:0,12,454	./.	./.	0/0:13,0:13:4.23:0,4,46	0/0:22,0:23:26.04:0,26,668	0/0:23,0:23:19.60:0,20,492	0/0:22,0:22:29.81:0,30,278	1/1:14,6:20:3.01:103,3,0	0/0:12,0:11:11.97:0,12,132	0/0:10,0:9:3.01:0,3,53	0/1:8,4:12:3.96:145,0,4	0/1:12,2:14:12.86:114,0,13	0/0:15,0:14:21.07:0,21,873	0/0:21,0:21:24.03:0,24,789	0/0:19,0:19:17.93:0,18,578	0/0:24,0:24:18.07:0,18,1088	0/0:16,0:16:32.81:0,33,1081	0/0:12,0:12:17.67:0,18,369	0/0:17,0:16:8.86:0,9,327	0/0:27,0:27:18.04:0,18,590	1/1:12,5:18:15.01:314,15,0	0/1:15,6:20:42.53:192,0,43	1/1:13,2:16:20.19:263,20,0	0/0:14,0:13:19.59:0,20,664	0/0:18,0:19:42.02:0,42,966	0/0:12,0:12:12.04:0,12,367	0/0:13,0:12:21.07:0,21,988
chr10	75984902	.	CTTTGTTTG	C	4075.59	PASS	AB=0.700;AC=11;AF=0.196;AN=56;BaseQRankSum=11.262;DP=683;FS=5.923;HRun=0;HaplotypeScore=173.2888;InbreedingCoeff=0.8773;MQ=69.55;MQ0=0;MQRankSum=-10.511;QD=36.39;ReadPosRankSum=-0.338;VQSLOD=3.0769;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:30.07:0,30,808	0/0:7,0:7:12.04:0,12,417	0/0:29,0:25:21.07:0,21,728	0/0:23,0:22:30.10:0,30,904	0/0:30,0:30:54.18:0,54,2066	0/0:29,0:29:57.19:0,57,1950	0/0:26,0:26:45.15:0,45,1467	0/0:38,0:38:54.18:0,54,1729	1/1:3,9:12:21.07:536,21,0	0/0:31,0:31:72.25:0,72,2619	0/0:27,0:28:72.23:0,72,2749	1/1:4,16:20:45.15:1148,45,0	1/1:5,20:25:39.13:995,39,0	0/0:24,0:24:60.19:0,60,2140	0/0:29,0:29:57.20:0,57,2198	0/0:29,0:29:72.25:0,72,2494	0/0:32,0:32:81.28:0,81,3032	0/0:20,0:20:51.18:0,51,2056	0/0:18,0:18:21.07:0,21,791	0/0:25,0:25:57.20:0,57,2029	0/0:19,0:19:42.14:0,42,1723	1/1:5,13:18:33.10:621,33,0	1/1:9,14:23:23.59:568,24,0	0/1:8,6:14:99:207,0,152	0/0:20,0:20:36.12:0,36,1491	0/0:32,0:33:81.26:0,81,3022	0/0:30,0:30:75.26:0,75,2892	0/0:24,0:24:51.18:0,51,2080
chr10	75984922	.	G	GTTTGTTTGT	1032.41	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.294;DP=690;FS=5.070;HRun=0;HaplotypeScore=197.9372;InbreedingCoeff=0.9657;MQ=61.27;MQ0=0;MQRankSum=-3.334;QD=30.37;ReadPosRankSum=1.534;VQSLOD=2.9870;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,21:34:24.08:1126,24,0	0/0:5,0:5:12.04:0,12,297	0/0:31,0:28:54.17:0,54,862	0/0:25,0:22:27.52:0,28,604	0/0:28,0:28:72.24:0,72,1599	0/0:25,0:25:63.19:0,63,1392	0/0:27,0:27:57.19:0,57,1164	0/0:30,0:30:57.18:0,57,1169	0/0:14,0:14:30.10:0,30,565	0/0:29,0:29:75.24:0,75,1777	0/0:25,0:25:72.23:0,72,1904	0/0:21,0:22:60.20:0,60,1157	0/0:28,0:28:57.17:0,57,1052	0/0:27,0:27:72.22:0,72,1515	0/0:27,0:27:66.22:0,66,1553	0/0:31,0:31:78.25:0,78,1810	0/0:32,0:32:87.26:0,87,2099	0/0:22,0:22:63.21:0,63,1482	0/0:19,0:19:48.02:0,48,857	0/0:20,0:20:51.17:0,51,1333	0/0:26,0:26:72.20:0,72,1413	0/0:17,0:17:30.09:0,30,526	0/0:18,0:18:33.02:0,33,599	0/0:18,0:18:30.08:0,30,476	0/0:23,0:23:54.18:0,54,1173	0/0:29,0:29:81.27:0,81,2032	0/0:36,0:36:99:0,102,2316	0/0:21,0:21:54.18:0,54,1397
chr10	75987072	.	CTG	C	1518.45	PASS	AB=0.998;AC=26;AF=0.520;AN=50;BaseQRankSum=2.866;DP=538;FS=4.977;HRun=0;HaplotypeScore=73.0388;InbreedingCoeff=-0.4769;MQ=46.12;MQ0=35;MQRankSum=3.264;QD=3.47;ReadPosRankSum=-1.251;VQSLOD=0.8816;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:28:23.25:210,23,0	0/1:8,0:7:1.90:33,0,2	./.	./.	0/0:6,4:10:6.01:0,6,72	0/1:17,0:16:28.20:28,0,57	0/0:25,0:23:1.30:0,1,125	0/1:28,0:26:16.62:17,0,231	0/0:5,18:22:2.88:0,3,9	0/1:15,0:11:19.10:19,0,82	0/1:16,0:15:30.17:60,0,30	1/1:13,0:11:15.97:114,16,0	0/1:15,0:13:18.21:81,0,18	0/1:21,0:19:66.66:95,0,67	0/1:28,0:27:45.67:46,0,228	0/1:23,0:23:99:104,0,99	0/1:20,0:19:56.91:57,0,87	0/1:30,0:29:99:122,0,127	0/1:19,0:17:10.86:11,0,127	0/1:22,0:21:54.55:98,0,55	0/1:30,0:27:24.17:108,0,24	0/1:24,1:23:6.95:145,0,7	./.	1/1:21,0:17:17.93:141,18,0	1/1:13,0:11:5.96:44,6,0	0/1:14,0:13:42.53:43,0,75	0/1:23,0:20:84.05:84,0,102	0/1:6,0:6:6.86:7,0,32
chr10	75987627	.	TCCAGGATGGCTTAGAACTCACTATGTAGC	T	9744.54	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.932;DP=745;FS=6.811;HRun=0;HaplotypeScore=489.1294;InbreedingCoeff=0.9558;MQ=74.51;MQ0=1;MQRankSum=-10.580;QD=66.29;ReadPosRankSum=6.531;VQSLOD=1.4307;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,148,15520	0/0:8,0:8:24.07:0,24,2033	0/0:22,0:21:51.18:0,51,3413	0/0:31,0:32:75.26:0,75,4895	0/0:28,0:28:75.26:0,75,7652	0/0:25,0:25:72.25:0,72,7869	0/0:25,0:25:72.20:0,72,5938	0/0:29,0:29:69.23:0,69,5730	1/1:7,20:27:15.05:1148,15,0	0/0:39,0:39:99:0,108,11047	0/0:23,0:23:63.22:0,63,6178	1/1:2,13:15:12.04:918,12,0	1/1:2,26:28:54.19:3951,54,0	0/0:22,0:22:63.20:0,63,7299	0/0:36,0:36:99:0,102,11424	0/0:27,0:27:69.22:0,69,7160	0/0:27,0:27:78.25:0,78,8639	0/0:30,0:30:84.25:0,84,8802	0/0:20,0:20:51.18:0,51,4523	0/0:18,0:18:48.16:0,48,4283	0/0:45,0:45:99:0,129,13075	1/1:7,10:17:9.03:689,9,0	1/1:6,19:25:35.68:2580,36,0	1/1:14,21:35:5.97:459,6,0	0/0:20,0:20:54.19:0,54,5732	0/0:24,0:24:69.24:0,69,7214	0/0:32,0:32:87.27:0,87,8652	0/0:14,0:14:36.12:0,36,4612
chr10	75988256	.	CT	C	1299.58	PASS	AB=0.898;AC=19;AF=0.339;AN=56;BaseQRankSum=6.698;DP=533;FS=2.044;HRun=13;HaplotypeScore=58.0758;InbreedingCoeff=0.5796;MQ=75.79;MQ0=0;MQRankSum=1.192;QD=6.19;ReadPosRankSum=3.555;VQSLOD=2.1763;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,20:26:21.48:321,21,0	0/0:6,0:6:12.02:0,12,117	0/0:13,0:13:9.27:0,9,79	0/0:16,1:13:6.83:0,7,95	0/0:25,0:28:16.36:0,16,268	0/1:17,3:20:17.28:17,0,301	0/1:18,3:22:26.87:27,0,221	0/0:22,0:22:36:0,36,336	1/1:0,11:11:23.86:175,24,0	0/0:28,0:29:41.20:0,41,419	0/0:17,1:18:8.14:0,8,241	1/1:4,12:17:19.89:135,20,0	1/1:6,10:17:13.86:93,14,0	0/0:28,3:31:19.12:0,19,458	0/1:3,1:20:4.59:5,0,59	0/0:12,0:12:35.97:0,36,323	0/0:16,0:18:32.97:0,33,299	0/1:13,1:14:0.89:1,0,148	0/0:14,0:14:23.99:0,24,213	0/0:19,1:21:15.81:0,16,303	0/0:20,1:21:20.13:0,20,343	1/1:2,13:16:40.81:290,41,0	1/1:9,5:14:4.23:77,4,0	1/1:3,16:21:48.79:340,49,0	0/0:12,2:14:14.13:0,14,291	0/0:29,1:30:23.11:0,23,360	0/0:23,3:26:7.11:0,7,338	0/1:10,2:12:7.77:8,0,251
chr10	75988865	.	C	CTTCTT	1095.12	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=3.444;DP=539;FS=13.131;HRun=0;HaplotypeScore=111.0017;InbreedingCoeff=0.8698;MQ=49.05;MQ0=51;MQRankSum=-4.323;QD=11.17;ReadPosRankSum=-5.202;VQSLOD=-0.1738;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:20:28.82:0,29,510	0/0:8,0:6:14.92:0,15,161	0/0:45,0:3:4.88:0,5,37	0/0:54,0:11:11.89:0,12,112	0/0:17,0:19:19.09:0,19,438	0/0:8,0:11:26.73:0,27,342	0/0:10,0:11:29.89:0,30,328	0/0:25,0:28:63.13:0,63,698	1/1:10,0:12:6.68:242,7,0	0/0:28,0:23:50.86:0,51,490	0/0:11,0:13:27.06:0,27,329	1/1:5,0:14:12.03:167,12,0	1/1:13,0:10:27.01:289,27,0	0/0:6,0:5:8.94:0,9,91	0/0:8,0:10:18.05:0,18,246	0/0:12,0:13:39.06:0,39,565	0/0:32,0:31:49.20:0,49,651	0/0:13,0:12:31.60:0,32,323	0/0:22,0:19:41.64:0,42,477	0/0:16,0:17:35.68:0,36,454	0/0:8,0:6:11.98:0,12,135	1/1:5,0:11:11.92:152,12,0	1/1:11,12:20:25.93:280,26,0	1/1:7,4:7:9.02:139,9,0	0/0:23,0:21:50.71:0,51,540	0/0:20,0:19:38.99:0,39,418	0/1:12,0:8:0.01:0,0,0	0/0:13,0:8:18.02:0,18,262
chr10	75990881	.	GGGAGAGTTGCT	G	891.49	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.187;DP=681;FS=0.000;HRun=0;HaplotypeScore=208.3456;InbreedingCoeff=0.9962;MQ=82.03;MQ0=0;MQRankSum=-5.372;QD=35.66;ReadPosRankSum=-0.986;VQSLOD=2.6189;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,18:25:30.10:986,30,0	0/0:11,0:11:24.08:0,24,1341	0/0:29,0:29:69.23:0,69,3399	0/0:28,0:28:60.21:0,60,2821	0/0:25,0:25:63.22:0,63,3504	0/0:21,0:21:60.21:0,60,3272	0/0:30,0:30:69.24:0,69,3347	0/0:37,0:37:78.26:0,78,3716	0/0:23,0:23:60.21:0,60,3214	0/0:33,0:33:90.31:0,90,4699	0/0:21,0:21:51.18:0,51,2673	0/0:23,0:23:57.20:0,57,3077	0/0:24,0:24:69.24:0,69,3806	0/0:14,0:14:36.12:0,36,1967	0/0:31,0:31:87.30:0,87,4688	0/0:21,0:21:60.21:0,60,3239	0/0:23,0:23:66.21:0,66,3419	0/0:24,0:24:63.19:0,63,3248	0/0:22,0:22:54.17:0,54,2644	0/0:18,0:18:49.37:0,49,2292	0/0:46,0:46:99:0,126,6863	0/0:17,0:17:36.12:0,36,1978	0/0:28,0:28:69.24:0,69,3761	0/0:18,0:18:54.19:0,54,2993	0/0:25,0:25:57.20:0,57,2994	0/0:23,0:23:63.20:0,63,3147	0/0:32,0:32:93.32:0,93,5032	0/0:9,0:9:27.09:0,27,1507
chr10	75991809	.	TC	T	2074.48	PASS	AB=0.904;AC=21;AF=0.375;AN=56;BaseQRankSum=6.410;DP=458;FS=4.294;HRun=11;HaplotypeScore=52.7834;InbreedingCoeff=0.5285;MQ=75.96;MQ0=1;MQRankSum=-0.283;QD=9.26;ReadPosRankSum=5.018;VQSLOD=2.2010;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,15:22:40.02:307,40,0	0/0:3,0:3:9.02:0,9,96	0/1:16,2:15:67.96:68,0,120	0/0:9,0:8:11.44:0,11,83	0/0:10,0:10:15.03:0,15,153	0/0:20,0:20:24.05:0,24,249	0/0:22,0:23:22.96:0,23,364	0/1:22,2:24:31.25:31,0,103	1/1:3,17:20:44.92:369,45,0	0/0:10,0:10:6.02:0,6,64	0/0:6,0:6:9.02:0,9,96	1/1:4,16:20:41.95:345,42,0	1/1:9,17:26:47.91:394,48,0	0/1:14,1:15:3.66:4,0,144	0/0:23,0:24:8.15:0,8,243	0/1:17,2:19:13.20:13,0,277	0/0:23,0:23:45.02:0,45,437	0/1:10,1:11:16.48:16,0,66	0/0:17,0:18:35.90:0,36,355	0/0:11,0:11:21.46:0,21,193	0/0:24,2:26:2.06:0,2,311	1/1:7,8:16:28.99:227,29,0	1/1:1,8:10:26.01:203,26,0	1/1:2,12:14:32.96:271,33,0	0/0:7,1:8:6.02:0,6,64	1/1:8,0:8:2.98:22,3,0	0/0:19,0:19:15.06:0,15,327	0/0:24,0:24:29.93:0,30,290
chr10	75992492	.	CTATTATTATTAT	C	1293.53	PASS	AC=12;AF=0.240;AN=50;BaseQRankSum=3.646;DP=307;FS=2.036;HRun=0;HaplotypeScore=104.2409;InbreedingCoeff=0.7312;MQ=73.62;MQ0=0;MQRankSum=-2.899;QD=26.40;ReadPosRankSum=1.890;VQSLOD=2.8853;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:15:15.90:0,16,161	./.	./.	0/0:9,0:9:9.78:0,10,61	0/0:12,0:13:24.07:0,24,915	0/0:10,0:16:18.05:0,18,733	./.	0/0:27,0:26:39.13:0,39,1232	1/1:6,7:13:15.05:507,15,0	0/0:7,0:8:9.03:0,9,215	0/0:5,0:5:3.01:0,3,151	1/1:10,0:10:12.03:199,12,0	1/1:6,3:10:7.66:328,8,0	0/0:5,0:7:3.01:0,3,36	0/0:8,0:8:12.04:0,12,582	0/0:3,0:3:6.01:0,6,80	0/0:22,0:24:42.06:0,42,1224	0/0:18,0:18:48.12:0,48,1967	0/0:17,0:18:23.25:0,23,829	0/0:4,0:4:6.01:0,6,201	0/0:11,0:11:12.04:0,12,501	1/1:3,2:5:5.93:119,6,0	1/1:3,1:5:9.02:195,9,0	1/1:3,3:6:2.93:101,3,0	0/0:7,0:7:12.04:0,12,685	0/0:9,0:9:9.03:0,9,290	0/0:10,0:11:12.04:0,12,619	0/0:26,0:26:42.14:0,42,2321
chr10	75994001	.	TAA	T	1173.47	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.276;DP=511;FS=0.000;HRun=14;HaplotypeScore=72.6972;InbreedingCoeff=0.9334;MQ=66.36;MQ0=6;MQRankSum=-1.453;QD=14.31;ReadPosRankSum=4.888;VQSLOD=2.7006;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,3:24:41.41:0,41,201	0/0:6,0:6:11.23:0,11,115	0/0:24,0:16:23.65:0,24,225	0/0:11,0:8:14.70:0,15,107	0/0:28,0:29:65.99:0,66,772	0/0:11,0:12:24.07:0,24,321	0/0:10,0:14:33.70:0,34,282	0/0:28,0:29:56.60:0,57,693	1/1:4,15:19:35.75:317,36,0	0/0:32,0:33:59.44:0,59,663	0/0:20,0:20:41.57:0,42,449	1/1:3,6:9:15.09:161,15,0	1/1:2,9:12:29.77:262,30,0	0/0:18,0:20:58.12:0,58,626	0/0:11,0:14:35.06:0,35,379	0/0:18,0:19:48.12:0,48,598	0/0:31,0:35:88.59:0,89,1017	0/0:17,0:19:47.56:0,48,565	0/0:15,0:21:49.08:0,49,514	0/0:24,0:27:65.08:0,65,725	0/0:8,0:8:12.01:0,12,133	1/1:3,9:13:17.93:166,18,0	1/1:4,13:17:9.34:229,9,0	1/1:3,9:12:24.01:219,24,0	0/0:11,0:11:24.07:0,24,307	0/0:18,0:19:39.06:0,39,452	0/0:23,0:23:51.59:0,52,639	0/0:6,0:5:0:0,0,0
chr10	75996203	.	TATC	T	387.64	PASS	AB=0.543;AC=1;AF=0.018;AN=56;BaseQRankSum=5.040;DP=704;FS=12.464;HRun=0;HaplotypeScore=88.6663;InbreedingCoeff=-0.0183;MQ=54.13;MQ0=27;MQRankSum=-1.533;QD=20.40;ReadPosRankSum=0.687;VQSLOD=2.7882;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:3,16:17:48.81:462,0,49	0/0:14,0:14:42.14:0,42,949	0/0:10,0:8:24.08:0,24,479	0/0:13,0:8:24.08:0,24,530	0/0:30,0:29:87.30:0,87,1923	0/0:24,0:24:66.20:0,66,1408	0/0:20,0:17:45.12:0,45,919	0/0:53,0:27:78.27:0,78,1765	0/0:21,0:21:57.20:0,57,1291	0/0:37,0:36:99:0,108,2437	0/0:30,0:29:87.30:0,87,1968	0/0:26,0:26:72.23:0,72,1581	0/0:22,0:22:63.22:0,63,1427	0/0:26,0:26:75.26:0,75,1699	0/0:34,0:34:93.31:0,93,2064	0/0:28,0:28:84.27:0,84,1812	0/0:29,0:29:72.23:0,72,1500	0/0:20,0:20:51.16:0,51,1155	0/0:23,0:12:30.10:0,30,680	0/0:39,0:39:99:0,114,2504	0/0:29,0:28:75.23:0,75,1570	0/0:32,0:31:90.31:0,90,2038	0/0:19,0:19:51.17:0,51,1152	0/0:22,0:21:60.21:0,60,1335	0/0:12,0:12:33.11:0,33,748	0/0:28,0:27:81.28:0,81,1836	0/0:25,0:25:72.25:0,72,1625	0/0:19,0:19:54.19:0,54,1224
chr10	75997629	.	TGAGAGA	T	1095.36	PASS	AB=0.792;AC=21;AF=0.389;AN=54;BaseQRankSum=5.860;DP=455;FS=28.804;HRun=0;HaplotypeScore=91.4971;InbreedingCoeff=0.5861;MQ=60.60;MQ0=10;MQRankSum=-3.629;QD=7.50;ReadPosRankSum=0.468;VQSLOD=0.2695;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:12:1.82:5,2,0	0/0:6,0:6:9.02:0,9,214	./.	0/0:37,0:15:0:0,0,0	0/0:19,0:19:12.02:0,12,228	0/0:12,0:12:12.03:0,12,228	0/0:13,0:16:3.01:0,3,78	0/0:29,0:28:12.92:0,13,222	1/1:6,4:11:12.04:223,12,0	0/0:15,0:17:2.18:0,2,42	1/1:7,0:8:0.88:2,1,0	1/1:5,4:10:9.03:163,9,0	1/1:8,10:19:21.54:405,22,0	0/0:8,0:17:18.06:0,18,485	1/1:10,0:15:5.65:30,6,0	0/1:14,1:18:16.19:56,0,16	1/1:14,0:16:1.58:3,2,0	0/0:17,0:18:30.10:0,30,756	0/0:11,0:11:3.01:0,3,97	0/0:9,0:9:6.02:0,6,176	0/0:17,0:22:27.09:0,27,749	1/1:7,2:9:3.01:60,3,0	1/1:6,5:11:12.04:242,12,0	1/1:16,0:15:6:71,6,0	0/0:11,0:14:1.29:0,1,22	0/0:25,0:24:36.12:0,36,967	0/0:18,0:21:18.06:0,18,469	0/0:8,0:8:16.61:0,17,462
chr10	75997945	.	TAA	T	2636.09	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.293;DP=515;FS=0.425;HRun=12;HaplotypeScore=68.0106;InbreedingCoeff=0.9667;MQ=73.40;MQ0=1;MQRankSum=2.310;QD=21.26;ReadPosRankSum=3.787;VQSLOD=3.2112;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:28:47.85:540,48,0	0/0:7,0:7:18.06:0,18,266	0/0:20,0:16:6.28:0,6,236	0/0:11,0:10:16.88:0,17,163	0/0:25,0:25:57.03:0,57,734	0/0:17,0:18:44.58:0,45,572	0/0:9,0:9:24.08:0,24,358	0/0:22,0:23:53.65:0,54,732	1/1:1,21:22:60.13:610,60,0	0/0:25,0:25:57.18:0,57,815	0/0:18,0:19:42.05:0,42,560	1/1:2,16:19:44.84:439,45,0	1/1:0,15:15:39.08:397,39,0	0/0:21,0:21:49.95:0,50,681	0/0:20,0:22:53.64:0,54,731	0/0:17,0:19:42.13:0,42,606	0/0:24,0:28:77.09:0,77,1074	0/0:17,0:17:51.14:0,51,717	0/0:15,0:15:36.12:0,36,535	0/0:19,0:20:51.15:0,51,718	0/0:14,0:14:33.11:0,33,492	1/1:2,15:17:42.07:427,42,0	1/1:0,7:8:8.75:144,9,0	1/1:3,12:15:27.05:275,27,0	0/0:20,0:22:51.16:0,51,726	0/0:24,0:24:69.20:0,69,973	0/0:17,0:19:44.60:0,45,564	0/0:13,0:13:34.89:0,35,448
chr10	75998312	.	G	GA	729.83	PASS	AB=0.963;AC=18;AF=0.321;AN=56;BaseQRankSum=3.214;DP=550;FS=0.000;HRun=13;HaplotypeScore=79.6100;InbreedingCoeff=0.3333;MQ=45.02;MQ0=33;MQRankSum=-6.036;QD=2.92;ReadPosRankSum=-2.561;VQSLOD=-0.4947;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,2:30:20.80:0,21,228	0/0:1,0:1:2.98:0,3,21	0/1:41,0:7:11.66:12,0,32	0/1:39,0:2:0:0,0,0	0/0:21,0:21:27.28:0,27,175	0/0:22,1:22:8.35:0,8,251	0/0:19,2:21:14.91:0,15,223	0/0:22,0:23:28.33:0,28,182	1/1:14,2:16:6.30:170,6,0	0/0:19,0:19:19.71:0,20,127	0/0:19,1:21:10.59:0,11,67	0/1:15,1:17:16.15:106,0,16	1/1:7,2:9:11.37:87,11,0	0/0:10,0:10:9.21:0,9,59	0/0:13,0:14:10.68:0,11,67	0/0:24,0:26:45.37:0,45,296	0/0:34,0:35:51.37:0,51,334	0/1:20,2:23:6.44:6,0,104	0/1:18,2:18:42.64:44,0,43	0/1:17,0:16:7.73:8,0,69	0/1:13,1:14:4.14:4,0,118	1/1:10,5:15:23.67:180,24,0	1/1:7,4:10:9.43:76,9,0	1/1:12,5:17:23.69:201,24,0	0/0:13,0:13:2.54:0,3,62	0/0:20,0:20:5.77:0,6,94	0/1:10,0:10:5.93:6,0,80	0/0:14,0:13:14.70:0,15,103
chr10	75998337	.	GA	G	723.95	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.954;DP=624;FS=13.124;HRun=10;HaplotypeScore=69.2823;InbreedingCoeff=0.9097;MQ=55.07;MQ0=24;MQRankSum=1.551;QD=8.94;ReadPosRankSum=2.042;VQSLOD=0.8745;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:72.16:0,72,802	0/0:2,0:2:6.02:0,6,68	0/0:52,0:12:1.86:0,2,69	0/0:60,0:13:29.43:0,29,226	0/0:21,0:21:41.14:0,41,446	0/0:20,0:18:44.58:0,45,469	0/0:14,0:14:33.06:0,33,351	0/0:33,0:32:73.78:0,74,729	1/1:6,7:13:21.01:192,21,0	0/0:17,0:17:32.99:0,33,348	0/0:26,0:25:44.81:0,45,466	1/1:7,8:17:23.90:219,24,0	1/1:3,6:11:8.99:82,9,0	0/0:13,0:13:33.04:0,33,355	0/0:16,0:16:36.05:0,36,391	0/0:27,0:27:53.06:0,53,615	0/0:32,0:31:55.97:0,56,621	0/0:22,0:22:33.01:0,33,358	0/0:25,0:25:65.05:0,65,686	0/0:19,0:17:39.09:0,39,437	0/0:16,0:16:33.03:0,33,347	1/1:4,7:12:18:164,18,0	1/1:7,3:10:17.94:163,18,0	1/1:10,4:17:9:82,9,0	0/0:18,0:18:30.07:0,30,334	0/0:33,0:32:74.37:0,74,798	0/0:27,0:26:54.11:0,54,588	0/0:15,0:15:29:0,29,320
chr10	76000006	.	G	GA	1066.95	PASS	AB=1.000;AC=15;AF=0.288;AN=52;BaseQRankSum=-0.403;DP=433;FS=20.842;HRun=6;HaplotypeScore=82.6562;InbreedingCoeff=0.6675;MQ=45.05;MQ0=50;MQRankSum=-2.699;QD=7.85;ReadPosRankSum=-2.422;VQSLOD=-0.2953;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:54.05:0,54,537	0/0:9,0:9:14.66:0,15,133	./.	./.	0/0:18,0:13:17.62:0,18,176	0/0:14,0:11:17.84:0,18,183	0/0:15,0:10:20.67:0,21,212	0/0:16,0:15:20.87:0,21,209	1/1:7,11:15:15.05:189,15,0	0/0:16,0:16:26.52:0,27,259	0/0:20,0:17:26.30:0,26,269	1/1:4,8:11:21.06:254,21,0	1/1:5,5:9:18.04:213,18,0	0/1:18,0:16:14.57:15,0,105	0/0:25,0:22:27.17:0,27,300	0/0:15,0:15:10.72:0,11,229	0/1:30,0:26:12.78:13,0,187	0/0:22,0:17:23.34:0,23,234	0/0:14,0:11:14.74:0,15,142	0/0:17,0:17:8.03:0,8,164	0/0:12,0:11:23.72:0,24,238	1/1:5,9:14:14.96:167,15,0	1/1:6,7:12:18.05:219,18,0	1/1:5,6:10:12.04:151,12,0	0/0:15,0:14:17.84:0,18,183	0/1:10,0:10:28.72:29,0,49	0/0:19,0:18:29.87:0,30,295	0/0:8,0:7:7.51:0,8,71
chr10	76000364	.	TGTCTGTGTCTGTGTGTGC	T	1580.36	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=7.190;DP=611;FS=10.080;HRun=0;HaplotypeScore=256.3527;InbreedingCoeff=0.9274;MQ=55.92;MQ0=24;MQRankSum=-3.934;QD=22.90;ReadPosRankSum=-0.200;VQSLOD=0.5971;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:33.48:0,33,851	0/0:11,0:11:24.08:0,24,1686	0/0:32,0:12:32.03:0,32,458	0/0:46,0:16:33.85:0,34,742	0/0:21,0:21:30.06:0,30,1252	0/0:18,0:18:51.16:0,51,3037	0/0:33,0:33:90.78:0,91,4415	0/0:27,0:26:75.22:0,75,2653	1/1:8,2:10:11.85:213,12,0	0/0:24,0:22:63.19:0,63,2417	0/0:16,0:16:27.06:0,27,1436	1/1:13,3:16:12.01:349,12,0	1/1:9,5:13:21.07:863,21,0	0/0:15,0:15:45.15:0,45,2728	0/0:21,0:21:63.20:0,63,3686	0/0:10,0:10:30.10:0,30,1790	0/0:27,0:27:78.23:0,78,5038	0/0:28,0:28:84.29:0,84,5235	0/0:20,0:18:46.24:0,46,1689	0/0:15,0:15:36.11:0,36,1885	0/0:54,0:54:99:0,144,9078	0/1:6,0:6:0:0,0,0	./.	1/1:21,2:23:12.48:305,12,0	0/0:17,0:17:42.13:0,42,1930	0/0:29,0:29:83.81:0,84,3480	0/0:13,0:13:39.13:0,39,2741	0/0:8,0:8:24.08:0,24,1587
chr10	76000365	.	GTC	G	190.37	PASS	AB=0.600;AC=9;AF=0.167;AN=54;BaseQRankSum=6.927;DP=609;FS=13.090;HRun=0;HaplotypeScore=114.7213;InbreedingCoeff=0.9148;MQ=55.94;MQ0=23;MQRankSum=-2.952;QD=2.76;ReadPosRankSum=0.400;VQSLOD=1.6914;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:33:0,33,554	0/0:11,0:11:24.08:0,24,463	0/0:32,0:12:30.33:0,30,376	0/0:47,0:17:33.79:0,34,535	0/0:21,0:21:30.06:0,30,507	0/0:18,0:18:51.16:0,51,937	0/0:33,0:33:90.26:0,90,1578	0/0:28,0:27:75.36:0,75,1371	1/1:9,1:10:7.71:60,8,0	0/0:24,0:22:63.19:0,63,1083	0/0:15,0:15:27.06:0,27,454	1/1:12,4:16:11.89:86,12,0	1/1:12,1:13:19.95:116,20,0	0/0:15,0:15:45.15:0,45,865	0/0:21,0:21:63.20:0,63,1172	0/0:10,0:10:30.10:0,30,570	0/0:27,0:27:78.25:0,78,1455	0/0:28,0:28:84.29:0,84,1609	0/0:20,0:18:47.79:0,48,751	0/0:13,0:13:36.11:0,36,649	0/0:53,0:53:99:0,144,2609	0/1:2,4:6:0:0,0,0	./.	1/1:16,8:24:11.95:75,12,0	0/0:17,0:17:42.11:0,42,693	0/0:29,0:29:83.79:0,84,1341	0/0:13,0:13:39.13:0,39,752	0/0:8,0:8:24.08:0,24,460
chr10	76000392	.	CGTGCGTGT	C	580.29	PASS	AB=0.833;AC=9;AF=0.161;AN=56;BaseQRankSum=5.908;DP=466;FS=9.525;HRun=0;HaplotypeScore=132.7297;InbreedingCoeff=0.8203;MQ=55.37;MQ0=9;MQRankSum=-3.814;QD=10.36;ReadPosRankSum=0.643;VQSLOD=1.9191;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:17.98:0,18,739	0/0:9,0:9:21.07:0,21,826	0/0:24,0:9:12:0,12,255	0/0:28,0:11:20.96:0,21,663	0/0:9,0:9:12.03:0,12,358	0/0:20,0:19:54.16:0,54,1796	0/0:24,0:24:57.17:0,57,1927	0/0:20,0:20:43.47:0,43,1415	1/1:5,2:7:6.11:50,6,0	0/0:12,0:11:33.11:0,33,1255	0/0:12,0:12:21.06:0,21,629	1/1:3,7:10:6.02:153,6,0	1/1:1,8:9:18.06:404,18,0	0/0:15,0:15:42.14:0,42,1485	0/0:16,0:16:42.13:0,42,1210	0/0:10,0:10:27.09:0,27,914	0/0:27,0:27:69.22:0,69,2378	0/0:25,0:25:72.21:0,72,2569	0/0:15,0:13:33.10:0,33,865	0/0:10,0:10:27.09:0,27,1028	0/0:46,0:46:99:0,114,3980	0/0:3,3:6:0:0,0,0	0/1:4,1:5:0.03:0,0,0	1/1:9,16:25:6.91:110,7,0	0/0:12,0:12:30.10:0,30,891	0/0:16,0:16:42.14:0,42,1310	0/0:12,0:12:30.10:0,30,1078	0/0:12,0:12:30.10:0,30,888
chr10	76000948	.	T	TTTG	821.86	PASS	AB=0.642;AC=1;AF=0.018;AN=56;BaseQRankSum=-6.185;DP=757;FS=8.321;HRun=0;HaplotypeScore=109.1642;InbreedingCoeff=-0.0238;MQ=66.20;MQ0=7;MQRankSum=0.868;QD=19.11;ReadPosRankSum=0.294;VQSLOD=3.0018;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:19,24:43:54.34:896,0,54	0/0:8,0:8:12.04:0,12,167	0/0:23,0:18:10.01:0,10,140	0/0:29,0:25:20.79:0,21,165	0/0:32,0:32:51.16:0,51,690	0/0:27,0:27:60.18:0,60,813	0/0:29,0:29:60.15:0,60,754	0/0:40,0:39:45.05:0,45,605	0/0:28,0:28:69.23:0,69,958	0/0:27,0:27:52.97:0,53,683	0/0:20,0:21:33.03:0,33,416	0/0:20,0:20:41.62:0,42,552	0/0:21,0:21:51.15:0,51,673	0/0:26,0:26:51.16:0,51,693	0/0:36,0:36:72.22:0,72,968	0/0:32,0:32:78.24:0,78,1037	0/0:28,0:28:57.16:0,57,757	0/0:20,0:20:47.01:0,47,591	0/0:11,0:11:9.03:0,9,124	0/0:24,0:24:54.16:0,54,718	0/0:29,0:28:45.13:0,45,593	0/0:28,0:28:60.19:0,60,818	0/0:23,0:23:39.13:0,39,541	0/0:59,0:59:99:0,132,1813	0/0:24,0:24:45.11:0,45,590	0/0:33,0:34:78.19:0,78,988	0/0:28,0:28:69.23:0,69,954	0/0:7,0:7:15.05:0,15,208
chr10	76002242	.	TC	T	956.62	PASS	AB=0.897;AC=25;AF=0.463;AN=54;BaseQRankSum=0.232;DP=322;FS=26.064;HRun=12;HaplotypeScore=38.6004;InbreedingCoeff=0.0183;MQ=78.89;MQ0=2;MQRankSum=0.506;QD=4.39;ReadPosRankSum=3.913;VQSLOD=0.0435;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:1.72:0,2,4	0/0:5,0:5:7.48:0,7,46	0/0:14,0:10:9.92:0,10,71	0/1:19,0:10:9.77:10,0,24	0/0:5,0:5:4.90:0,5,53	0/0:15,1:16:0.27:0,0,154	0/1:31,1:32:42.71:43,0,432	0/1:15,1:16:17.12:17,0,25	1/1:1,9:10:20.92:162,21,0	./.	1/1:5,0:5:2.93:18,3,0	1/1:3,4:7:8.94:70,9,0	1/1:1,7:8:14.94:116,15,0	0/1:16,4:20:75.81:91,0,76	0/1:3,2:5:21.48:37,0,21	0/1:8,1:9:7.77:8,0,93	0/0:14,1:15:6.93:0,7,248	0/1:13,1:14:8.71:9,0,188	0/0:13,0:13:6.48:0,6,139	0/0:6,0:6:0.89:0,1,3	0/1:13,2:15:34.76:35,0,43	1/1:4,3:7:19.11:136,19,0	1/1:4,10:14:17.92:139,18,0	1/1:5,9:15:25.93:192,26,0	0/1:5,1:6:14.22:14,0,52	0/0:6,0:6:0:0,0,0	0/1:9,0:9:9.39:9,0,81	0/1:4,1:5:11.15:11,0,66
chr10	76003678	.	AT	A	383.47	PASS	AB=0.831;AC=28;AF=0.667;AN=42;BaseQRankSum=1.681;DP=103;FS=0.000;HRun=1;HaplotypeScore=13.8713;InbreedingCoeff=0.1831;MQ=55.66;MQ0=3;MQRankSum=-3.882;QD=4.57;ReadPosRankSum=-1.070;VQSLOD=-0.0878;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:1.36:2,1,0	./.	0/0:6,0:1:2.88:0,3,15	0/0:6,0:1:2.22:0,2,7	0/0:1,0:1:2.88:0,3,15	1/1:1,2:3:3.85:22,4,0	./.	0/1:11,3:13:46:46,0,50	./.	0/1:4,0:4:16.95:17,0,21	1/1:2,0:1:0.47:1,0,0	1/1:1,0:1:0.47:1,0,0	./.	1/1:3,0:3:0.47:1,0,0	0/0:2,0:2:2.13:0,2,14	./.	0/1:23,0:22:15.92:162,0,16	1/1:12,0:12:24.51:157,25,0	0/0:1,0:1:0:0,0,0	1/1:0,1:1:2.99:23,3,0	0/1:0,2:2:0:0,0,0	./.	1/1:1,0:1:0.89:2,1,0	./.	1/1:4,0:4:0.47:1,0,0	1/1:3,0:3:3.02:7,3,0	1/1:6,0:6:6.49:26,6,0	1/1:1,0:1:2.98:21,3,0
chr10	76007595	.	G	GTCAT	6253.96	PASS	AB=0.595;AC=11;AF=0.196;AN=56;BaseQRankSum=-12.106;DP=712;FS=3.880;HRun=0;HaplotypeScore=110.8171;InbreedingCoeff=0.8631;MQ=71.42;MQ0=0;MQRankSum=1.411;QD=37.90;ReadPosRankSum=0.455;VQSLOD=4.6317;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,108,1732	0/0:15,0:15:39.12:0,39,608	0/0:21,0:19:8.46:0,8,181	0/0:13,0:13:9.37:0,9,114	0/0:27,0:27:75.22:0,75,1145	0/0:17,0:17:33.10:0,33,507	0/0:19,0:19:33.11:0,33,532	0/0:43,0:43:54.15:0,54,767	1/1:10,23:35:60.21:1452,60,0	0/0:35,0:35:78.26:0,78,1238	0/0:18,0:18:42.14:0,42,675	1/1:8,18:26:42.14:1008,42,0	1/1:12,16:29:36.09:820,36,0	0/0:18,0:18:48.16:0,48,772	0/0:34,0:35:84.27:0,84,1312	0/0:31,0:31:75.26:0,75,1214	0/0:14,0:14:30.08:0,30,461	0/0:19,0:19:45.14:0,45,705	0/0:24,0:24:45.14:0,45,703	0/0:27,0:27:63:0,63,980	0/0:30,0:30:66.17:0,66,993	1/1:13,21:35:66.22:1513,66,0	0/1:7,12:22:12.51:761,0,13	1/1:7,10:18:30.10:699,30,0	0/0:29,0:29:66.21:0,66,1040	0/0:35,0:35:93.24:0,93,1451	0/0:25,0:25:63.21:0,63,1016	0/0:6,0:6:12.02:0,12,170
chr10	76008172	.	T	TC	3719.06	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-9.138;DP=652;FS=0.000;HRun=8;HaplotypeScore=73.5396;InbreedingCoeff=0.9903;MQ=69.32;MQ0=1;MQRankSum=-0.047;QD=22.40;ReadPosRankSum=3.339;VQSLOD=4.0182;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,35:44:44.74:757,45,0	0/0:7,0:7:21.01:0,21,192	0/0:23,0:21:48.08:0,48,388	0/0:19,0:17:26.66:0,27,224	0/0:20,0:20:53.35:0,53,462	0/0:21,0:20:54:0,54,489	0/0:30,0:30:43.57:0,44,648	0/0:29,1:30:18.51:0,19,309	1/1:2,21:23:57.61:645,58,0	0/0:17,0:17:41.75:0,42,367	0/0:12,0:12:36.01:0,36,325	1/1:3,25:28:66.14:754,66,0	1/1:5,14:20:35.94:395,36,0	0/0:26,0:26:78.03:0,78,709	0/0:28,0:28:72.03:0,72,659	0/0:22,0:23:65.07:0,65,583	0/0:45,0:45:99:0,123,1108	0/0:31,0:31:81:0,81,733	0/0:17,0:16:38.93:0,39,335	0/0:15,0:15:39.02:0,39,357	0/0:44,0:44:99:0,114,1042	1/1:3,15:18:12.04:371,12,0	1/1:2,9:11:27.08:312,27,0	1/1:4,18:22:42.12:485,42,0	0/0:26,0:26:75.02:0,75,677	0/0:20,0:20:54.02:0,54,494	0/0:25,0:23:63:0,63,573	0/0:6,0:6:17.81:0,18,149
chr10	76008384	.	G	GA	2435.64	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-8.043;DP=687;FS=0.000;HRun=10;HaplotypeScore=77.8262;InbreedingCoeff=0.8465;MQ=67.42;MQ0=5;MQRankSum=0.428;QD=15.61;ReadPosRankSum=-0.008;VQSLOD=3.8508;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:52.04:0,52,271	0/0:12,1:13:0.97:0,1,214	0/0:30,0:19:22.03:0,22,175	0/1:33,0:22:4.25:4,0,111	0/0:28,0:28:43.64:0,44,516	0/0:25,0:25:59.91:0,60,492	0/0:32,0:32:89.79:0,90,729	0/0:25,0:27:51.73:0,52,398	1/1:4,15:20:26.27:452,26,0	0/0:31,1:32:35.90:0,36,488	0/0:17,1:18:9.91:0,10,282	1/1:4,16:20:17.46:391,17,0	1/1:2,15:17:17.27:391,17,0	0/0:14,0:14:5.07:0,5,196	0/0:24,0:24:56.92:0,57,468	0/0:22,0:22:62.89:0,63,512	0/0:36,0:39:92.96:0,93,731	0/0:22,0:23:55.95:0,56,449	0/0:19,0:19:51.32:0,51,403	0/0:26,0:27:49.87:0,50,391	0/0:19,2:21:21.95:0,22,387	1/1:3,18:21:39.10:414,39,0	1/1:5,16:21:17.93:392,18,0	1/1:2,22:24:54.14:576,54,0	0/0:24,0:24:54.79:0,55,461	0/0:41,0:41:99:0,105,862	0/0:24,1:25:27.93:0,28,436	0/0:15,0:15:38.94:0,39,320
chr10	76008390	.	AAAAAG	A	721.52	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.957;DP=685;FS=0.000;HRun=0;HaplotypeScore=132.2396;InbreedingCoeff=0.9281;MQ=66.10;MQ0=6;MQRankSum=-1.139;QD=23.27;ReadPosRankSum=1.411;VQSLOD=3.2802;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,26:31:46.81:816,47,0	0/0:13,0:13:30.07:0,30,594	0/0:31,0:17:16.98:0,17,200	0/0:30,0:18:8.40:0,8,288	0/0:29,0:29:63.18:0,63,1508	0/0:23,0:23:60.17:0,60,1527	0/0:31,0:31:69.12:0,69,1669	0/0:28,0:28:42.12:0,42,891	0/0:20,0:20:51.16:0,51,1097	0/0:33,0:33:78.26:0,78,1965	0/0:17,0:17:36.10:0,36,883	0/0:21,0:21:51.14:0,51,1001	0/0:19,0:19:51.62:0,52,1084	0/0:14,0:14:30.10:0,30,759	0/0:23,0:23:60.18:0,60,1451	0/0:25,0:25:69.21:0,69,1741	0/0:39,0:39:93.76:0,94,2517	0/0:24,0:24:63.22:0,63,1638	0/0:18,0:18:42.14:0,42,1172	0/0:25,0:25:54.15:0,54,1221	0/0:19,0:19:51.15:0,51,1319	0/0:22,0:22:48.16:0,48,945	0/0:19,0:19:45.15:0,45,1000	0/0:28,0:28:69.07:0,69,1264	0/0:22,0:22:57.20:0,57,1495	0/0:41,0:41:99:0,108,2604	0/0:25,0:25:57.18:0,57,1480	0/0:15,0:15:39.13:0,39,921
chr10	76011867	.	G	GA	1092.47	PASS	AB=0.921;AC=4;AF=0.071;AN=56;BaseQRankSum=-8.535;DP=715;FS=0.536;HRun=10;HaplotypeScore=76.0275;InbreedingCoeff=0.4345;MQ=67.92;MQ0=0;MQRankSum=0.937;QD=12.70;ReadPosRankSum=1.806;VQSLOD=3.6059;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,42:50:73.89:1181,74,0	0/1:10,1:11:8.20:8,0,148	0/0:18,0:16:7.86:0,8,114	0/0:15,0:14:15.62:0,16,107	0/0:24,0:25:70.93:0,71,569	0/0:18,1:20:8.98:0,9,269	0/1:22,2:25:13.05:13,0,319	0/0:24,0:25:61.94:0,62,496	0/0:24,0:24:62.85:0,63,508	0/0:24,0:24:59.92:0,60,492	0/0:19,0:19:41.93:0,42,345	0/0:21,0:21:53.90:0,54,437	0/0:22,0:22:56.91:0,57,465	0/0:27,0:27:71.88:0,72,591	0/0:32,1:34:47.93:0,48,587	0/0:28,0:28:65.81:0,66,534	0/0:37,0:38:99:0,104,843	0/0:15,0:15:44.95:0,45,369	0/0:27,1:31:37:0,37,476	0/0:14,0:14:35.91:0,36,292	0/0:51,0:51:99:0,106,968	0/0:23,0:24:55.92:0,56,445	0/0:24,1:25:33.92:0,34,485	0/0:43,2:48:45.94:0,46,779	0/0:23,0:23:59.91:0,60,492	0/0:27,0:27:68.91:0,69,567	0/0:14,1:14:9.95:0,10,285	0/0:15,0:15:41.88:0,42,336
chr10	76012372	.	C	CAA	1658.85	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=1.464;DP=510;FS=8.080;HRun=12;HaplotypeScore=74.8843;InbreedingCoeff=0.7803;MQ=74.47;MQ0=5;MQRankSum=-0.620;QD=9.70;ReadPosRankSum=-0.221;VQSLOD=1.4219;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:37:49.78:645,50,0	0/0:5,0:6:5.96:0,6,103	0/0:58,0:27:23.89:0,24,179	0/1:31,0:18:4.49:4,0,12	0/0:10,0:10:14.93:0,15,139	0/0:22,0:22:44.83:0,45,412	0/0:12,0:13:29.75:0,30,308	0/0:21,0:24:22.55:0,23,357	1/1:3,7:9:12.04:168,12,0	0/0:7,0:7:14.99:0,15,135	0/0:13,0:16:23.02:0,23,302	1/1:9,8:20:14.23:176,14,0	1/1:8,9:20:18.05:237,18,0	0/0:7,0:8:11.94:0,12,148	0/0:12,0:12:26.97:0,27,250	0/0:14,0:15:23.95:0,24,265	0/0:33,0:33:89.56:0,90,791	0/0:25,0:26:56.84:0,57,553	0/0:18,0:18:35.64:0,36,317	0/0:8,0:9:11.98:0,12,157	0/1:12,0:12:7.56:8,0,179	1/1:2,6:8:17.95:203,18,0	1/1:3,6:10:10.28:129,10,0	1/1:6,14:23:21.05:281,21,0	0/0:10,0:10:20.96:0,21,193	0/0:33,0:33:59.50:0,60,562	0/0:13,0:14:29.72:0,30,308	0/0:3,0:4:2.96:0,3,75
chr10	76012992	.	TAA	T	737.15	PASS	AB=0.672;AC=9;AF=0.161;AN=56;BaseQRankSum=-0.110;DP=518;FS=0.000;HRun=17;HaplotypeScore=72.5975;InbreedingCoeff=0.6467;MQ=72.14;MQ0=9;MQRankSum=0.839;QD=9.21;ReadPosRankSum=3.102;VQSLOD=1.1790;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:34:56.53:0,57,301	0/0:5,0:6:14.39:0,14,146	0/0:41,0:19:28.34:0,28,233	0/0:40,0:15:15.41:0,15,155	0/0:15,0:18:32.94:0,33,293	0/0:18,0:18:34.77:0,35,366	0/0:16,0:19:26.16:0,26,430	0/0:21,0:23:50.81:0,51,549	0/1:8,4:13:36.27:134,0,36	0/0:13,0:16:36.03:0,36,383	0/0:13,0:15:33.06:0,33,371	1/1:5,7:12:17.77:142,18,0	1/1:5,5:11:15.13:155,15,0	0/0:14,1:14:29.46:0,29,348	0/0:12,0:16:37.20:0,37,396	0/0:8,0:8:17.99:0,18,199	0/0:27,0:27:67.19:0,67,778	0/0:22,0:24:53.21:0,53,601	0/0:13,0:17:30.24:0,30,298	0/0:21,0:24:43.95:0,44,419	0/0:10,0:10:17.46:0,17,139	1/1:3,4:7:9.78:91,10,0	0/1:5,3:9:0.46:78,0,0	0/1:11,15:26:21.80:290,0,22	0/0:14,0:15:34.68:0,35,327	0/0:18,0:22:43.12:0,43,411	0/0:15,0:15:29.57:0,30,329	0/0:12,0:12:20.53:0,21,211
chr10	76015174	.	CACACACAG	C	4212.92	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.488;DP=699;FS=2.453;HRun=0;HaplotypeScore=175.3748;InbreedingCoeff=0.9736;MQ=67.97;MQ0=5;MQRankSum=-11.614;QD=34.53;ReadPosRankSum=-0.109;VQSLOD=4.4948;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:75.04:0,75,2850	0/0:15,0:15:33.11:0,33,1333	0/0:31,0:20:19.58:0,20,606	0/0:39,0:31:30.85:0,31,762	0/0:29,0:29:60.03:0,60,2311	0/0:23,0:23:51.16:0,51,1926	0/0:20,0:20:36.02:0,36,1144	0/0:25,0:25:33.11:0,33,930	1/1:6,21:27:36.12:874,36,0	0/0:40,0:39:75.24:0,75,2643	0/0:27,0:27:42.14:0,42,1632	1/1:4,11:15:27.09:682,27,0	1/1:6,12:18:33.11:834,33,0	0/0:23,0:23:51.12:0,51,1793	0/0:24,0:24:54.19:0,54,2230	0/0:31,0:31:72.22:0,72,2854	0/0:35,0:35:72.23:0,72,2712	0/0:27,0:27:63.16:0,63,2302	0/0:13,0:13:15.02:0,15,517	0/0:39,0:39:78.25:0,78,2958	0/0:13,0:13:24.07:0,24,788	1/1:5,19:25:42.14:1052,42,0	1/1:11,16:27:27.09:678,27,0	1/1:4,6:10:6.38:92,6,0	0/0:22,0:22:45.12:0,45,1557	0/0:26,0:26:45.15:0,45,1837	0/0:34,0:33:78.18:0,78,2961	0/0:8,0:8:21.07:0,21,867
chr10	76017596	.	T	TC	547.51	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=-0.790;DP=507;FS=3.119;HRun=1;HaplotypeScore=52.4810;InbreedingCoeff=0.8357;MQ=49.38;MQ0=63;MQRankSum=-0.594;QD=19.55;ReadPosRankSum=1.179;VQSLOD=3.9347;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,20:25:31.37:641,31,0	0/0:8,0:8:21.01:0,21,224	0/0:9,0:2:0:0,0,0	./.	0/0:24,0:22:43.58:0,44,560	0/0:20,0:17:39.02:0,39,448	0/0:27,0:23:57.07:0,57,687	0/0:22,0:15:21.22:0,21,318	0/0:9,0:7:12.04:0,12,155	0/0:17,0:13:38.90:0,39,437	0/0:19,0:17:45.03:0,45,505	0/0:19,0:18:42.04:0,42,483	0/0:16,0:11:20.99:0,21,211	0/0:7,0:7:15.03:0,15,167	0/0:12,0:11:24.06:0,24,280	0/0:24,0:19:37.68:0,38,575	0/0:33,0:28:57.05:0,57,672	0/0:28,0:20:42.08:0,42,501	0/0:20,0:14:36.10:0,36,446	0/0:13,0:11:30.08:0,30,361	0/0:23,0:14:29.12:0,29,353	0/0:9,0:8:18.01:0,18,201	0/0:13,0:11:27.09:0,27,346	0/0:17,0:12:30.10:0,30,385	0/0:21,0:21:56.90:0,57,690	0/0:22,0:19:48.08:0,48,550	0/0:20,0:17:31.40:0,31,405	0/0:12,0:11:30.10:0,30,386
chr10	76018940	.	AAC	A	346.93	PASS	AB=0.904;AC=22;AF=0.407;AN=54;BaseQRankSum=4.346;DP=568;FS=5.758;HRun=0;HaplotypeScore=78.4722;InbreedingCoeff=-0.4670;MQ=66.02;MQ0=12;MQRankSum=1.648;QD=0.91;ReadPosRankSum=0.753;VQSLOD=0.6873;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:11.96:0,12,95	0/1:11,1:12:18.51:19,0,141	./.	0/0:41,0:19:2.80:0,3,45	0/1:17,3:21:65.09:65,0,230	0/1:11,5:16:6.80:7,0,184	0/1:21,7:28:71.86:72,0,347	0/1:26,0:24:14.24:14,0,208	0/0:15,0:14:17.45:0,17,70	0/0:26,0:26:26.50:0,27,560	0/1:10,2:12:12.48:12,0,207	0/0:21,0:21:14.60:0,15,97	0/1:11,0:11:1.10:1,0,73	0/1:14,0:14:12.16:12,0,219	0/1:15,1:18:12.46:12,0,205	0/1:16,2:18:3.43:3,0,357	0/1:13,4:17:15.47:15,0,185	0/1:12,3:15:9.45:9,0,272	0/1:13,3:16:40.75:41,0,102	0/0:9,0:9:15.05:0,15,226	0/1:40,0:37:6.29:6,0,604	0/1:19,1:20:37.32:37,0,65	1/1:9,0:9:5.73:41,6,0	0/1:17,0:17:11.01:46,0,11	0/1:15,2:17:49.15:49,0,245	0/1:22,1:23:20.92:21,0,288	0/1:18,2:20:0.55:1,0,312	0/1:9,2:10:9.46:9,0,251
chr10	76018973	.	ACACCC	A	471.29	PASS	AB=0.939;AC=7;AF=0.125;AN=56;BaseQRankSum=2.095;DP=625;FS=0.000;HRun=0;HaplotypeScore=108.9782;InbreedingCoeff=0.3973;MQ=60.26;MQ0=36;MQRankSum=-1.604;QD=4.96;ReadPosRankSum=0.164;VQSLOD=1.6945;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:27:8.58:32,0,9	0/0:10,0:8:18.06:0,18,471	0/0:23,0:11:33.11:0,33,579	0/0:26,0:13:37.34:0,37,646	0/0:19,0:19:26.35:0,26,900	0/0:16,0:15:32.12:0,32,609	0/0:41,0:41:99:0,106,2278	0/0:39,0:36:57.74:0,58,1720	0/0:19,0:14:0.47:0,0,39	0/0:25,0:24:44.59:0,45,1525	0/0:10,0:9:24.07:0,24,561	0/0:23,0:21:10.07:0,10,104	0/1:15,1:13:56:56,0,73	0/0:27,0:27:66.16:0,66,1412	0/0:13,0:13:33.11:0,33,827	0/0:18,0:18:51.17:0,51,1289	0/0:20,0:19:42.14:0,42,973	0/0:27,0:26:72.18:0,72,1582	0/0:22,0:18:22.88:0,23,861	0/0:10,0:10:30.10:0,30,782	0/0:56,0:51:99:0,143,3025	0/1:12,2:13:45.34:183,0,45	1/1:2,7:9:5.62:132,6,0	1/1:9,14:19:7.25:196,7,0	0/0:22,0:22:56.94:0,57,1276	0/0:24,0:24:60.03:0,60,1166	0/0:24,0:24:63.21:0,63,1442	0/0:16,0:13:33.11:0,33,834
chr10	76021550	.	TCA	T	396.23	PASS	AB=0.931;AC=9;AF=0.161;AN=56;BaseQRankSum=8.564;DP=340;FS=4.341;HRun=0;HaplotypeScore=60.7925;InbreedingCoeff=0.1554;MQ=79.44;MQ0=1;MQRankSum=-0.115;QD=4.50;ReadPosRankSum=5.407;VQSLOD=1.4287;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:46.89:0,47,586	0/1:4,0:4:7.42:7,0,80	0/0:22,0:16:27.94:0,28,404	0/1:11,0:8:9.86:10,0,161	0/0:12,0:12:29.80:0,30,330	0/0:11,0:11:27.05:0,27,375	0/0:17,0:17:46.94:0,47,520	0/0:14,0:14:39.86:0,40,419	0/1:6,2:8:1.80:72,0,2	0/0:13,0:13:33.09:0,33,501	0/0:6,0:6:12.03:0,12,181	0/1:9,0:9:16.75:94,0,17	0/1:8,3:11:39.46:117,0,39	0/0:10,0:10:21.05:0,21,336	0/0:11,0:11:32.52:0,33,384	0/0:6,0:6:17.94:0,18,238	0/0:32,0:31:51.92:0,52,929	0/0:12,0:12:1.99:0,2,290	0/0:10,0:10:23.60:0,24,233	0/0:9,0:9:23.97:0,24,322	0/0:9,0:9:20.92:0,21,225	1/1:12,0:12:24.25:91,24,0	0/1:19,0:19:12.30:47,0,12	0/1:13,1:14:58.18:100,0,58	0/0:11,0:11:26.83:0,27,273	0/0:8,0:8:24.05:0,24,321	0/0:8,0:8:20.93:0,21,219	0/0:10,0:10:26.26:0,26,346
chr10	76021552	.	ACC	A	1383.95	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=3.967;DP=344;FS=6.199;HRun=12;HaplotypeScore=58.8780;InbreedingCoeff=0.9044;MQ=80.07;MQ0=1;MQRankSum=1.343;QD=18.96;ReadPosRankSum=4.551;VQSLOD=2.5835;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:32.38:0,32,392	0/0:5,0:5:9.01:0,9,105	0/0:23,0:17:11.58:0,12,242	0/0:14,0:10:2.07:0,2,46	0/0:9,0:11:22.92:0,23,254	0/0:11,0:12:24.07:0,24,340	0/0:12,0:15:34.06:0,34,381	0/0:14,0:14:17.53:0,18,206	1/1:3,5:8:21.04:213,21,0	0/0:12,0:12:27.09:0,27,388	0/0:4,0:5:9.03:0,9,134	1/1:4,5:9:21.01:203,21,0	1/1:7,3:11:23.77:222,24,0	0/0:9,0:9:18.06:0,18,267	0/0:12,0:13:32.57:0,33,406	0/0:5,0:6:17.55:0,18,232	0/0:32,0:31:56.61:0,57,854	0/0:12,0:13:26.53:0,27,323	0/0:9,0:10:11.53:0,12,142	0/0:9,0:9:15.05:0,15,218	0/0:7,0:9:17.44:0,17,147	1/1:1,11:12:33.07:336,33,0	1/1:2,17:19:36.08:366,36,0	1/1:6,8:14:23.90:228,24,0	0/0:9,0:12:16.90:0,17,177	0/0:7,0:7:15.04:0,15,197	0/0:7,0:9:17.55:0,18,232	0/0:10,0:10:21.06:0,21,289
chr10	76021864	.	CCAAA	C	1146.42	PASS	AB=0.981;AC=4;AF=0.071;AN=56;BaseQRankSum=-0.149;DP=750;FS=13.922;HRun=0;HaplotypeScore=128.0900;InbreedingCoeff=0.4605;MQ=55.73;MQ0=10;MQRankSum=1.924;QD=13.49;ReadPosRankSum=-0.206;VQSLOD=2.1881;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,32:39:54.18:901,54,0	0/0:12,0:12:27.08:0,27,617	0/0:29,0:17:27.03:0,27,266	0/0:32,0:16:33.03:0,33,344	0/0:18,0:18:45.12:0,45,967	0/1:20,0:20:84.82:85,0,355	0/1:25,1:26:99:276,0,277	0/0:33,0:32:46.33:0,46,583	0/0:27,0:27:57.05:0,57,1177	0/0:24,0:24:50.70:0,51,882	0/0:16,0:16:27.07:0,27,511	0/0:37,0:37:96.56:0,97,1781	0/0:23,0:23:63.06:0,63,1087	0/0:29,0:28:69.08:0,69,1236	0/0:33,0:33:87.17:0,87,1808	0/0:23,0:23:63.11:0,63,1198	0/0:38,0:38:96.17:0,96,1875	0/0:29,0:29:72.10:0,72,1387	0/0:21,0:19:46.53:0,47,623	0/0:14,0:14:32.99:0,33,659	0/0:37,0:37:84.63:0,85,1588	0/0:25,0:25:60.17:0,60,1226	0/0:30,0:30:38.55:0,39,933	0/0:36,0:36:93.29:0,93,2052	0/0:16,0:16:45.13:0,45,957	0/0:34,0:34:87.18:0,87,1726	0/0:32,0:32:81.06:0,81,1291	0/0:17,0:17:51.01:0,51,905
chr10	76023174	.	GAA	G	196.89	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=2.309;DP=431;FS=7.379;HRun=13;HaplotypeScore=78.5921;InbreedingCoeff=0.6396;MQ=56.95;MQ0=4;MQRankSum=-1.053;QD=5.18;ReadPosRankSum=1.592;VQSLOD=-0.4077;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,13:21:29.91:291,30,0	0/0:8,0:8:8.39:0,8,92	0/0:15,0:6:10.85:0,11,57	0/1:17,0:4:1.92:2,0,5	0/0:15,0:15:25.61:0,26,309	0/0:10,0:12:21.53:0,22,274	0/0:14,0:15:23.98:0,24,459	0/0:18,0:22:61.63:0,62,738	0/0:15,0:15:38.79:0,39,485	0/0:10,0:12:27.06:0,27,339	0/0:17,0:17:45.01:0,45,529	0/0:13,0:13:21.05:0,21,269	0/0:7,0:9:15.50:0,16,185	0/0:15,0:14:25.18:0,25,274	0/0:8,0:8:9.03:0,9,131	0/0:18,0:19:41.61:0,42,539	0/0:19,0:23:58.01:0,58,604	0/0:11,0:12:31.98:0,32,341	0/0:24,2:27:7.31:0,7,647	0/0:12,0:12:33.05:0,33,425	0/0:7,1:8:14.48:0,14,178	0/0:10,0:9:21.03:0,21,280	0/0:14,1:17:9.02:0,9,372	0/0:16,0:18:37.67:0,38,507	0/0:8,0:10:23.35:0,23,243	0/0:20,0:20:45.48:0,45,539	0/0:13,0:13:27.07:0,27,348	0/0:22,0:24:59.65:0,60,778
chr10	76025078	.	C	CCAG	1671.29	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.218;DP=544;FS=0.748;HRun=0;HaplotypeScore=79.6063;InbreedingCoeff=0.9310;MQ=85.10;MQ0=0;MQRankSum=-4.305;QD=52.23;ReadPosRankSum=1.039;VQSLOD=5.7434;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:32:78.27:1766,78,0	0/0:7,0:7:21.06:0,21,315	0/0:15,0:15:39.11:0,39,615	0/0:20,0:21:48.14:0,48,731	0/0:7,0:7:18.06:0,18,300	0/0:14,0:14:39.13:0,39,639	0/0:26,0:26:69.24:0,69,1138	0/0:32,0:32:90.31:0,90,1491	0/0:18,0:18:48.16:0,48,792	0/0:26,0:26:75.23:0,75,1158	0/0:9,0:9:27.09:0,27,445	0/0:30,0:30:84.27:0,84,1374	0/0:10,0:10:30.10:0,30,496	0/0:19,0:19:54.18:0,54,894	0/0:24,0:24:72.23:0,72,1169	0/0:16,0:16:45.15:0,45,750	0/0:40,0:40:99:0,111,1815	0/0:27,0:27:81.28:0,81,1349	0/0:21,0:21:57.19:0,57,950	0/0:10,0:10:24.05:0,24,372	0/0:22,0:22:63.19:0,63,1023	0/0:20,0:20:60.20:0,60,990	0/0:13,0:13:39.13:0,39,639	0/0:23,0:23:66.18:0,66,1063	0/0:21,0:21:54.18:0,54,891	0/0:25,0:25:66.23:0,66,1100	0/0:13,0:13:39.13:0,39,649	0/0:3,0:3:9.01:0,9,124
chr10	76026112	.	GTCAT	G	299.68	PASS	AB=0.920;AC=5;AF=0.089;AN=56;BaseQRankSum=4.810;DP=764;FS=8.119;HRun=0;HaplotypeScore=124.6736;InbreedingCoeff=0.5426;MQ=67.32;MQ0=10;MQRankSum=0.105;QD=4.41;ReadPosRankSum=0.191;VQSLOD=2.0176;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:22:2.62:35,3,0	0/0:14,0:14:30.10:0,30,695	0/0:29,0:24:9.03:0,9,148	0/0:22,0:21:2.19:0,2,78	0/0:36,0:36:48.16:0,48,1132	0/0:24,0:24:51.17:0,51,1151	0/0:21,0:21:24.08:0,24,526	0/0:47,0:46:42.11:0,42,830	0/0:25,0:25:42.14:0,42,983	0/0:26,0:25:54.17:0,54,1218	0/0:16,0:16:25.33:0,25,521	0/0:42,0:41:57.16:0,57,1281	0/0:21,0:21:30.10:0,30,710	0/0:29,0:28:39.13:0,39,890	0/0:43,0:43:69.24:0,69,1523	0/0:33,0:33:63.22:0,63,1453	0/0:17,0:17:33.08:0,33,636	0/0:18,0:18:33.11:0,33,720	0/0:23,0:18:30.10:0,30,686	0/0:29,0:29:45.15:0,45,1018	0/1:21,2:23:51.95:52,0,676	1/1:12,11:23:21.02:329,21,0	0/0:31,0:31:39.09:0,39,781	0/0:27,0:27:33.11:0,33,781	0/0:22,0:22:39.11:0,39,875	0/0:35,0:34:60.19:0,60,1340	0/0:42,0:42:66.20:0,66,1414	0/0:23,1:24:1.14:0,1,959
chr10	76026165	.	CCCT	C	190.30	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=3.972;DP=631;FS=13.554;HRun=0;HaplotypeScore=71.2393;InbreedingCoeff=0.8090;MQ=38.06;MQ0=149;MQRankSum=-4.262;QD=13.59;ReadPosRankSum=-2.884;VQSLOD=1.3047;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:13:21.07:282,21,0	0/0:15,0:12:29.56:0,30,653	0/0:15,0:1:3:0,3,25	./.	0/0:28,0:27:42.14:0,42,917	0/0:28,0:24:39.12:0,39,766	0/0:20,0:13:24.08:0,24,498	0/0:30,0:17:36.12:0,36,787	0/0:26,0:18:30.09:0,30,584	0/0:21,0:18:45.15:0,45,983	0/0:16,0:14:12.04:0,12,262	0/0:32,0:22:48.16:0,48,1020	0/0:19,0:12:27.09:0,27,534	0/0:24,0:16:30.10:0,30,627	0/0:41,0:35:60.19:0,60,1270	0/0:42,0:34:63.20:0,63,1321	0/0:21,0:16:24.08:0,24,524	0/0:13,0:10:21.07:0,21,452	0/0:19,0:13:30.10:0,30,634	0/0:25,0:19:48.16:0,48,1046	0/0:21,0:13:26.99:0,27,590	0/0:17,0:14:21.07:0,21,445	0/0:12,0:11:21.07:0,21,429	0/0:27,0:25:39.12:0,39,786	0/0:25,0:16:24.08:0,24,524	0/0:25,0:21:60.19:0,60,1269	0/0:27,0:24:45.15:0,45,967	0/0:18,0:17:39.13:0,39,830
chr10	76026967	.	CCA	C	3711.92	PASS	AB=0.946;AC=15;AF=0.268;AN=56;BaseQRankSum=10.670;DP=676;FS=0.000;HRun=0;HaplotypeScore=85.0732;InbreedingCoeff=0.8733;MQ=73.86;MQ0=7;MQRankSum=2.622;QD=18.75;ReadPosRankSum=3.282;VQSLOD=3.8377;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,26:38:71.89:847,72,0	0/0:14,0:14:33.11:0,33,521	0/0:34,0:26:18.06:0,18,265	0/0:44,0:35:36.45:0,36,434	0/0:16,1:17:0.78:0,1,485	0/0:17,0:18:48.04:0,48,694	0/0:37,1:38:51.93:0,52,1245	0/1:33,2:35:0.97:1,0,673	1/1:5,15:20:39.12:459,39,0	0/0:24,0:26:18.96:0,19,743	0/0:10,0:10:24.08:0,24,379	1/1:4,19:23:48.14:565,48,0	1/1:5,17:22:42.98:571,43,0	0/0:22,0:22:57.19:0,57,896	0/0:33,1:34:24.86:0,25,855	0/0:31,0:31:69.22:0,69,1053	0/0:27,1:28:25.59:0,26,939	0/0:18,0:18:42.04:0,42,586	0/0:11,0:11:24.08:0,24,375	0/0:15,2:17:9.86:0,10,619	0/0:43,0:43:89.06:0,89,1346	1/1:10,4:14:18.73:255,19,0	1/1:2,11:13:30.09:353,30,0	1/1:12,21:32:15.83:659,16,0	0/0:13,0:13:33.11:0,33,521	0/0:21,1:22:12.81:0,13,654	0/0:20,1:20:6.77:0,7,509	0/0:15,0:15:36.12:0,36,568
chr10	76030701	.	A	AG	2029.55	PASS	AB=0.938;AC=16;AF=0.286;AN=56;BaseQRankSum=-5.974;DP=411;FS=0.491;HRun=9;HaplotypeScore=51.8311;InbreedingCoeff=0.7052;MQ=82.09;MQ0=2;MQRankSum=0.130;QD=14.71;ReadPosRankSum=1.673;VQSLOD=3.4645;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,14:19:27.07:295,27,0	0/0:6,0:6:8.67:0,9,63	0/0:15,0:16:3.49:0,3,130	0/0:10,0:9:14.93:0,15,123	0/0:8,0:8:20.98:0,21,182	0/0:11,0:10:20.91:0,21,173	0/0:23,1:24:50.94:0,51,436	0/0:4,0:4:9:0,9,78	1/1:5,7:12:21.06:230,21,0	0/0:14,0:14:32.72:0,33,270	0/0:4,0:4:9:0,9,78	1/1:8,18:26:51.14:564,51,0	1/1:2,9:11:24.06:265,24,0	0/0:20,0:20:47.99:0,48,417	0/0:16,0:16:47.99:0,48,416	0/1:5,0:5:10.22:10,0,89	0/0:24,1:25:26.78:0,27,456	0/1:24,4:28:30.62:31,0,440	0/0:11,0:11:14.36:0,14,112	0/0:3,0:3:6:0,6,52	0/0:46,2:47:71.64:0,72,827	1/1:3,5:8:15:152,15,0	1/1:1,3:4:9.02:100,9,0	1/1:6,16:25:56.69:574,57,0	0/0:14,0:14:0.70:0,1,161	0/0:11,0:11:14.97:0,15,130	0/0:20,0:20:41.96:0,42,360	0/0:8,0:8:17.99:0,18,156
chr10	76032252	.	T	TG	1114.33	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.100;DP=592;FS=1.477;HRun=2;HaplotypeScore=60.5469;InbreedingCoeff=0.9828;MQ=79.29;MQ0=0;MQRankSum=-0.496;QD=32.77;ReadPosRankSum=2.003;VQSLOD=3.5913;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:34:84.28:1209,84,0	0/0:10,0:10:30.09:0,30,372	0/0:28,0:27:69.96:0,70,872	0/0:29,0:23:41.13:0,41,638	0/0:34,0:34:93.29:0,93,1149	0/0:17,0:17:51.11:0,51,614	0/0:21,0:21:60.17:0,60,730	0/0:29,0:29:55.31:0,55,906	0/0:15,0:15:45.14:0,45,556	0/0:16,0:16:48.14:0,48,574	0/0:23,0:23:66.21:0,66,816	0/0:18,0:18:54.17:0,54,669	0/0:18,0:18:54.14:0,54,653	0/0:20,0:20:57.14:0,57,678	0/0:28,0:28:84.19:0,84,999	0/0:14,0:14:42.12:0,42,508	0/0:39,0:39:99:0,108,1313	0/0:15,0:15:42.09:0,42,488	0/0:20,0:20:48.11:0,48,560	0/0:30,0:30:81.24:0,81,979	0/0:18,0:18:54.15:0,54,655	0/0:23,0:23:69.20:0,69,841	0/0:16,0:16:45.14:0,45,557	0/0:10,0:10:27.08:0,27,335	0/0:15,0:15:45.14:0,45,557	0/0:15,0:15:42.13:0,42,521	0/0:31,0:31:87.18:0,87,1021	0/0:5,0:5:15.05:0,15,186
chr10	76035858	.	T	TAC	6939.66	PASS	AB=0.570;AC=10;AF=0.179;AN=56;BaseQRankSum=-12.267;DP=917;FS=1.070;HRun=0;HaplotypeScore=127.7334;InbreedingCoeff=0.8064;MQ=66.83;MQ0=3;MQRankSum=-0.674;QD=29.04;ReadPosRankSum=3.132;VQSLOD=6.4917;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:30:8.12:0,8,34	0/0:19,0:20:50.99:0,51,589	0/0:29,0:20:17.87:0,18,195	0/0:45,0:39:59.17:0,59,674	0/0:27,0:27:72.21:0,72,852	0/0:29,0:31:60.18:0,60,719	0/0:37,0:39:71.81:0,72,835	0/0:40,0:40:72.17:0,72,816	0/1:9,35:44:2.49:1429,0,2	0/0:32,0:32:69.20:0,69,817	0/0:22,0:22:31.16:0,31,490	1/1:10,41:53:12.41:1631,12,0	1/1:14,28:44:31.14:1130,31,0	0/0:38,0:38:93.26:0,93,1102	0/0:28,0:28:62.88:0,63,754	0/0:40,0:41:92.81:0,93,1033	0/0:33,0:33:84.25:0,84,995	0/0:24,0:24:60.18:0,60,720	0/0:17,0:17:15.04:0,15,170	0/0:15,0:16:32.90:0,33,350	0/0:65,0:65:99:0,147,1705	0/1:6,14:21:5.89:402,0,6	1/1:10,19:29:51.17:812,51,0	1/1:8,39:48:96.33:1535,96,0	0/0:23,0:25:57.01:0,57,662	0/0:29,0:29:72.20:0,72,839	0/0:34,0:34:42.73:0,43,854	0/0:12,0:12:24.07:0,24,287
chr10	76035868	.	CACACACACAGACTCACAT	C	345.10	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.219;DP=906;FS=0.000;HRun=0;HaplotypeScore=421.6111;InbreedingCoeff=0.9671;MQ=62.94;MQ0=3;MQRankSum=-0.553;QD=13.80;ReadPosRankSum=-2.873;VQSLOD=0.2787;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,13:25:11.85:431,12,0	0/0:19,0:19:57.20:0,57,4423	0/0:34,0:23:60.07:0,60,1994	0/0:49,0:38:99:0,100,4242	0/0:29,0:29:84.29:0,84,6027	0/0:31,0:31:72.25:0,72,4980	0/0:38,0:38:99:0,100,6284	0/0:33,0:33:87.29:0,87,4478	0/0:41,0:41:99:0,117,7920	0/0:33,0:33:96.32:0,96,6223	0/0:22,0:22:58.06:0,58,3988	0/0:53,0:53:99:0,136,8558	0/0:43,0:43:96.31:0,96,6484	0/0:38,0:38:99:0,111,7543	0/0:27,0:27:71.70:0,72,5051	0/0:39,0:39:99:0,111,7186	0/0:31,0:31:87.28:0,87,6068	0/0:24,0:24:72.22:0,72,4766	0/0:13,0:13:36.10:0,36,1797	0/0:15,0:15:45.13:0,45,2365	0/0:66,0:66:99:0,181,13010	0/0:26,0:26:58.54:0,59,3331	0/0:25,0:25:66.19:0,66,3924	0/0:49,0:49:99:0,117,7378	0/0:25,0:25:69.24:0,69,5157	0/0:28,0:28:81.27:0,81,5838	0/0:34,0:34:99:0,102,7694	0/0:16,0:16:39.13:0,39,2764
chr10	76035977	.	G	GT	931.06	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.815;DP=742;FS=3.643;HRun=5;HaplotypeScore=69.7592;InbreedingCoeff=0.9997;MQ=76.06;MQ0=0;MQRankSum=-2.322;QD=28.21;ReadPosRankSum=1.066;VQSLOD=4.0670;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:78.25:1026,78,0	0/0:13,0:13:39.05:0,39,400	0/0:21,0:21:41.47:0,41,429	0/0:17,0:16:39.09:0,39,411	0/0:26,0:26:63.15:0,63,677	0/0:28,0:28:81.17:0,81,853	0/0:28,0:28:78.19:0,78,836	0/0:31,0:31:87.22:0,87,934	0/0:26,0:26:78.20:0,78,838	0/0:25,0:25:69.17:0,69,736	0/0:18,0:18:54.13:0,54,573	0/0:37,0:37:99:0,102,1088	0/0:25,0:25:72.15:0,72,757	0/0:33,0:33:90.19:0,90,948	0/0:38,0:38:99:0,102,1095	0/0:35,0:35:93.21:0,93,985	0/0:27,0:27:75.17:0,75,798	0/0:15,0:15:39.07:0,39,409	0/0:18,0:18:45.10:0,45,477	0/0:18,0:18:51.11:0,51,539	0/0:27,0:27:72.18:0,72,773	0/0:32,0:32:96.24:0,96,1032	0/0:24,0:24:69.14:0,69,724	0/0:28,0:28:69.17:0,69,741	0/0:26,0:26:75.19:0,75,806	0/0:38,0:38:99:0,111,1186	0/0:31,0:31:87.22:0,87,935	0/0:24,0:24:69.17:0,69,741
chr10	76039538	.	ACCCC	A	596.07	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.001;DP=246;FS=24.065;HRun=13;HaplotypeScore=48.5943;InbreedingCoeff=0.4866;MQ=75.04;MQ0=0;MQRankSum=-2.456;QD=16.11;ReadPosRankSum=4.326;VQSLOD=-0.0023;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,22:34:46.78:689,47,0	0/0:5,0:6:11.21:0,11,110	0/0:14,0:11:14.33:0,14,145	0/0:10,0:8:9.01:0,9,111	0/0:3,0:3:6:0,6,75	0/0:7,0:7:15.05:0,15,255	0/0:19,0:20:30.56:0,31,364	0/0:7,0:8:8.99:0,9,102	0/0:7,0:7:9.03:0,9,120	0/0:2,0:2:6.02:0,6,96	1/1:2,0:3:0.86:2,1,0	0/0:10,0:10:23.55:0,24,295	0/0:7,0:7:8.97:0,9,87	0/0:10,0:10:21.06:0,21,319	0/0:7,0:7:15.05:0,15,253	0/0:8,0:8:15.05:0,15,256	0/0:12,0:12:33.09:0,33,494	0/0:13,0:13:33.55:0,34,527	0/0:8,0:8:9.03:0,9,196	0/0:3,0:3:0.88:0,1,2	0/0:10,0:10:15.05:0,15,243	0/0:3,0:3:0:0,0,0	0/0:6,0:6:3.01:0,3,38	0/0:16,0:16:34.04:0,34,507	0/0:6,0:6:15.05:0,15,254	0/0:6,0:6:3:0,3,25	0/0:4,0:4:9.01:0,9,149	0/0:3,0:3:6.02:0,6,86
chr10	76040361	.	C	CT	944.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.141;DP=787;FS=7.816;HRun=10;HaplotypeScore=81.0185;InbreedingCoeff=0.9687;MQ=76.97;MQ0=0;MQRankSum=-1.084;QD=21.95;ReadPosRankSum=1.619;VQSLOD=4.4475;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,35:43:99:1039,100,0	0/0:8,0:8:14.97:0,15,123	0/0:22,0:25:17.54:0,18,237	0/0:14,0:14:22.62:0,23,157	0/0:31,0:31:80.86:0,81,659	0/0:20,0:20:50.93:0,51,419	0/0:30,1:31:54.91:0,55,657	0/0:48,0:48:95.76:0,96,778	0/0:31,0:31:71.85:0,72,582	0/0:30,0:31:73.93:0,74,597	0/0:20,1:21:21.93:0,22,384	0/0:37,0:37:89.84:0,90,733	0/0:35,0:36:88.87:0,89,715	0/0:33,0:33:77.83:0,78,635	0/0:37,0:37:99:0,102,834	0/0:28,0:28:77.88:0,78,637	0/0:27,0:27:61.92:0,62,498	0/0:24,0:24:59.88:0,60,487	0/0:35,0:35:83.79:0,84,678	0/0:24,0:24:62.01:0,62,510	0/0:28,0:28:74.83:0,75,604	0/0:23,0:25:52.86:0,53,413	0/0:21,0:22:52.96:0,53,422	0/0:31,0:31:86.88:0,87,714	0/0:25,0:25:65.83:0,66,527	0/0:32,0:32:83.83:0,84,682	0/0:28,0:26:73.72:0,74,596	0/0:9,0:11:26.96:0,27,222
chr10	76041297	.	CT	C	385.12	PASS	AB=0.886;AC=9;AF=0.161;AN=56;BaseQRankSum=-0.906;DP=595;FS=0.000;HRun=14;HaplotypeScore=87.1391;InbreedingCoeff=0.0908;MQ=73.57;MQ0=0;MQRankSum=1.324;QD=2.08;ReadPosRankSum=1.705;VQSLOD=-0.5201;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,31:44:36.55:389,37,0	0/0:8,1:9:0.41:0,0,138	0/0:20,0:14:17.08:0,17,110	0/0:20,1:13:10.90:0,11,59	0/0:25,0:29:48.30:0,48,447	0/0:15,0:17:32.03:0,32,312	0/0:18,1:20:15.29:0,15,272	0/1:19,1:20:5.77:6,0,211	0/0:10,0:21:54.97:0,55,356	0/0:22,1:24:36.14:0,36,448	0/1:15,1:17:2.06:2,0,234	0/0:17,0:27:61:0,61,388	0/0:14,0:19:37.64:0,38,235	0/0:21,0:22:24.01:0,24,312	0/1:20,1:21:0.22:0,0,257	0/0:25,0:25:42.68:0,43,517	0/0:36,1:36:66.51:0,67,755	0/1:19,7:26:28.27:28,0,333	0/1:18,3:22:8.01:8,0,312	0/0:19,0:22:4.55:0,5,293	0/1:11,2:13:14.14:14,0,168	0/0:11,0:16:28.77:0,29,186	0/0:6,0:13:19.24:0,19,133	0/0:9,0:16:31.86:0,32,202	0/0:14,0:15:22.99:0,23,218	0/1:17,5:22:66.88:67,0,159	0/0:20,2:22:17.86:0,18,325	0/0:13,0:14:23.53:0,24,306
chr10	76041330	.	G	GA	1717.15	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-2.988;DP=603;FS=1.065;HRun=10;HaplotypeScore=75.1943;InbreedingCoeff=0.8834;MQ=69.22;MQ0=2;MQRankSum=0.409;QD=13.01;ReadPosRankSum=1.012;VQSLOD=3.7104;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:86.86:0,87,714	0/0:8,0:8:17.96:0,18,148	0/0:18,1:9:5.86:0,6,40	0/1:20,0:13:5.42:5,0,79	0/0:32,0:32:65.88:0,66,542	0/0:21,0:21:41.90:0,42,341	0/0:16,1:17:12.93:0,13,309	0/0:25,0:26:64.96:0,65,523	1/1:10,14:24:17.35:362,17,0	0/0:17,0:18:37.97:0,38,300	0/0:15,0:15:38.93:0,39,320	1/1:8,20:28:51.13:544,51,0	1/1:12,10:22:30.06:313,30,0	0/0:21,0:21:44.91:0,45,369	0/0:25,0:26:61.93:0,62,498	0/0:29,0:29:62.84:0,63,511	0/0:37,0:36:78.32:0,78,641	0/0:25,0:25:53.90:0,54,443	0/0:23,0:24:33.18:0,33,418	0/0:24,0:24:56.91:0,57,468	0/0:16,0:16:26.93:0,27,222	1/1:3,6:9:12.03:127,12,0	1/1:4,8:12:24.04:246,24,0	1/1:8,9:17:30.05:305,30,0	0/0:15,0:15:35.93:0,36,295	0/0:25,0:25:62.92:0,63,517	0/0:21,0:21:41.89:0,42,345	0/0:8,0:8:14.97:0,15,123
chr10	76042637	.	C	CG	5632.68	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-8.612;DP=670;FS=2.524;HRun=5;HaplotypeScore=68.8572;InbreedingCoeff=0.9964;MQ=82.77;MQ0=0;MQRankSum=-2.900;QD=32.37;ReadPosRankSum=2.859;VQSLOD=5.6104;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:96.23:0,96,1031	0/0:11,0:11:24.06:0,24,258	0/0:16,0:16:39.07:0,39,405	0/0:21,0:21:57.10:0,57,580	0/0:24,0:24:66.16:0,66,708	0/0:15,0:15:39.05:0,39,406	0/0:38,0:38:99:0,99,1064	0/0:24,0:24:48.07:0,48,495	1/1:4,23:27:66.21:863,66,0	0/0:22,0:22:54.13:0,54,579	0/0:8,0:8:21.05:0,21,226	1/1:3,50:53:99:1851,141,0	1/1:3,34:38:81.26:1061,81,0	0/0:32,0:32:93.23:0,93,999	0/0:27,0:27:66.16:0,66,709	0/0:19,0:19:42.06:0,42,439	0/0:33,0:33:93.19:0,93,987	0/0:28,0:28:72.16:0,72,765	0/0:12,0:12:30.07:0,30,322	0/0:10,0:10:24.06:0,24,258	0/0:47,0:47:99:0,117,1257	1/1:4,11:15:36.11:451,36,0	1/1:3,8:12:27.55:342,28,0	1/1:0,29:29:81.26:1066,81,0	0/0:18,0:18:42.10:0,42,451	0/0:23,0:23:54.13:0,54,580	0/0:21,0:21:54.13:0,54,579	0/0:6,0:6:18.05:0,18,193
chr10	76049267	.	GGACA	G	729.53	PASS	AB=0.966;AC=3;AF=0.054;AN=56;BaseQRankSum=5.806;DP=453;FS=14.458;HRun=0;HaplotypeScore=73.4262;InbreedingCoeff=0.6514;MQ=79.18;MQ0=0;MQRankSum=-2.332;QD=14.03;ReadPosRankSum=0.204;VQSLOD=1.6073;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,19:24:48.16:824,48,0	0/0:2,0:2:6.02:0,6,148	0/0:19,0:18:39.13:0,39,863	0/0:20,0:21:45.15:0,45,1083	0/0:6,0:6:15.03:0,15,326	0/0:7,0:7:18.06:0,18,453	0/0:18,0:18:51.18:0,51,1270	0/1:27,1:28:0.31:0,0,1085	0/0:19,0:19:42.14:0,42,1046	0/0:14,0:14:36.12:0,36,845	0/0:7,0:7:21.07:0,21,491	0/0:35,0:35:90.29:0,90,2185	0/0:18,0:18:54.16:0,54,1304	0/0:25,0:25:75.26:0,75,1879	0/0:14,0:13:36.12:0,36,902	0/0:17,0:17:48.16:0,48,1205	0/0:25,0:25:69.21:0,69,1657	0/0:24,0:24:66.23:0,66,1649	0/0:14,0:14:21.07:0,21,516	0/0:5,0:5:9.03:0,9,227	0/0:32,0:32:84.29:0,84,2115	0/0:6,0:6:18.06:0,18,428	0/0:7,0:7:18.05:0,18,402	0/0:24,0:24:66.23:0,66,1661	0/0:16,0:16:48.16:0,48,1181	0/0:13,0:13:36.12:0,36,896	0/0:9,0:9:24.08:0,24,604	0/0:4,0:4:12.04:0,12,302
chr10	76052327	.	T	TGGG	1640.60	PASS	AB=0.917;AC=13;AF=0.232;AN=56;BaseQRankSum=0.680;DP=531;FS=30.002;HRun=8;HaplotypeScore=90.6251;InbreedingCoeff=0.8189;MQ=75.66;MQ0=0;MQRankSum=-0.788;QD=13.34;ReadPosRankSum=-0.090;VQSLOD=-0.3924;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:87.15:0,87,1084	0/0:8,0:8:15.50:0,16,198	0/1:10,0:11:7.08:7,0,119	0/0:10,0:10:15.03:0,15,197	0/0:12,0:13:25.61:0,26,319	0/0:15,0:15:30.04:0,30,393	0/0:19,0:19:45.13:0,45,591	0/0:22,0:23:45.08:0,45,576	1/1:8,8:18:12.51:222,13,0	0/0:22,0:22:42.08:0,42,538	0/0:7,0:7:15.03:0,15,196	1/1:13,23:41:44.93:733,45,0	1/1:1,13:16:18.04:316,18,0	0/0:31,0:31:87.19:0,87,1098	0/0:21,0:21:54.14:0,54,694	0/0:17,0:17:45.06:0,45,557	0/0:36,0:36:96.29:0,96,1261	0/0:27,0:27:66.16:0,66,850	0/0:15,0:15:35.87:0,36,446	0/0:10,0:10:21.03:0,21,260	0/0:46,0:46:99:0,102,1318	1/1:5,0:8:3:26,3,0	1/1:1,2:6:3.01:38,3,0	1/1:6,14:23:27.52:471,28,0	0/0:12,0:12:30.06:0,30,376	0/0:18,0:18:42.07:0,42,532	0/0:15,0:14:45.15:0,45,591	0/0:5,0:5:12.03:0,12,158
chr10	76053166	.	GCT	G	1378.35	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.989;DP=558;FS=52.423;HRun=0;HaplotypeScore=108.5459;InbreedingCoeff=0.9742;MQ=66.59;MQ0=4;MQRankSum=-10.282;QD=9.25;ReadPosRankSum=5.175;VQSLOD=1.3882;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:27.07:300,27,0	0/0:7,0:6:18.05:0,18,249	0/0:27,0:20:47.19:0,47,612	0/0:27,0:23:38.31:0,38,487	0/0:11,0:11:30.02:0,30,380	0/0:16,0:16:42.03:0,42,620	0/0:23,0:23:51.16:0,51,765	0/0:17,0:16:36.10:0,36,511	1/1:3,17:20:18.05:213,18,0	0/0:21,0:20:48.10:0,48,655	0/0:7,0:7:11.93:0,12,115	1/1:6,22:28:26.56:290,27,0	1/1:3,17:20:27.07:295,27,0	0/0:24,0:24:63.08:0,63,813	0/0:14,0:14:32.99:0,33,419	0/0:17,0:17:44.74:0,45,496	0/0:22,0:22:51.02:0,51,738	0/0:24,0:23:60.14:0,60,815	0/0:13,0:12:24.06:0,24,324	0/0:8,0:8:18.06:0,18,258	0/0:60,2:62:99:0,120,1876	1/1:2,12:14:16.85:202,17,0	1/1:2,12:14:11.45:133,11,0	1/1:1,24:25:12.04:140,12,0	0/0:19,0:19:44.86:0,45,530	0/0:23,0:23:63.17:0,63,894	0/0:11,0:11:23.98:0,24,302	0/0:15,0:14:27.02:0,27,307
chr10	76053182	.	GCA	G	687.40	PASS	AB=0.951;AC=27;AF=0.587;AN=46;BaseQRankSum=4.946;DP=541;FS=16.816;HRun=0;HaplotypeScore=104.0823;InbreedingCoeff=0.0800;MQ=56.00;MQ0=22;MQRankSum=-1.528;QD=1.79;ReadPosRankSum=2.851;VQSLOD=0.4586;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:24:2.84:14,3,0	0/0:10,0:9:3.01:0,3,41	./.	./.	1/1:10,0:10:2.99:26,3,0	0/0:21,0:21:28.30:0,28,252	0/1:26,0:26:22.19:22,0,224	./.	1/1:14,0:17:8.52:42,9,0	1/1:22,1:19:6.72:75,7,0	1/1:6,1:8:5.92:66,6,0	1/1:17,0:23:14.68:71,15,0	1/1:14,0:16:5.59:26,6,0	0/1:29,0:25:13.88:14,0,102	0/1:14,2:15:19.85:20,0,105	1/1:9,8:17:15.04:160,15,0	0/1:26,0:26:54.25:54,0,228	0/1:25,0:24:32.42:32,0,154	0/0:11,0:10:2.97:0,3,20	0/0:7,0:7:2.97:0,3,20	0/1:67,0:62:54.99:55,0,275	./.	./.	1/1:19,0:22:1.74:22,2,0	1/1:12,7:16:11.86:110,12,0	0/0:24,0:22:7.47:0,7,147	0/1:7,3:10:26.06:26,0,38	0/0:7,0:4:3.01:0,3,42
chr10	76058816	.	TG	T	1426.49	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.374;DP=665;FS=0.000;HRun=3;HaplotypeScore=63.1480;InbreedingCoeff=0.9681;MQ=69.14;MQ0=0;MQRankSum=-2.805;QD=31.70;ReadPosRankSum=1.040;VQSLOD=3.6876;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,44:45:99:1521,123,0	0/0:9,0:9:27.08:0,27,371	0/0:6,0:6:14.79:0,15,205	0/0:11,0:11:15.39:0,15,223	0/0:12,0:12:36.12:0,36,514	0/0:17,0:17:51.17:0,51,733	0/0:36,0:36:99:0,105,1503	0/0:30,0:30:87.26:0,87,1189	0/0:15,0:15:45.13:0,45,612	0/0:21,0:21:63.21:0,63,907	0/0:12,0:12:36.10:0,36,498	0/0:46,0:46:99:0,135,1917	0/0:28,0:28:84.28:0,84,1208	0/0:26,0:26:72.23:0,72,1017	0/0:35,0:35:99:0,102,1467	0/0:19,0:19:57.17:0,57,799	0/0:32,0:32:96.32:0,96,1382	0/0:30,0:30:87.27:0,87,1232	0/0:21,0:21:63.17:0,63,846	0/0:11,0:11:33.11:0,33,475	0/0:61,0:61:99:0,175,2483	0/0:16,0:16:48.16:0,48,691	0/0:12,0:12:36.12:0,36,516	0/0:40,0:40:99:0,120,1673	0/0:17,0:17:48.14:0,48,672	0/0:22,0:22:63.21:0,63,892	0/0:15,0:15:45.12:0,45,625	0/0:20,0:20:60.20:0,60,864
chr10	76061915	.	CAT	C	634	PASS	AB=0.933;AC=13;AF=0.250;AN=52;BaseQRankSum=4.840;DP=464;FS=1.321;HRun=0;HaplotypeScore=62.2983;InbreedingCoeff=0.7914;MQ=58.29;MQ0=2;MQRankSum=0.702;QD=6.04;ReadPosRankSum=0.828;VQSLOD=2.7383;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:2.62:16,3,0	0/0:9,0:9:21:0,21,245	./.	./.	0/0:13,0:13:20.97:0,21,188	0/0:19,0:18:39.02:0,39,442	0/0:20,0:20:42.02:0,42,473	0/0:30,0:29:65.97:0,66,581	1/1:14,0:14:26.88:208,27,0	0/0:24,0:24:65.94:0,66,670	0/0:10,0:10:21.05:0,21,317	1/1:1,18:19:17.95:205,18,0	0/1:13,1:14:15.97:55,0,16	0/0:19,0:19:36.04:0,36,439	0/0:11,0:11:17.97:0,18,147	0/0:15,0:15:31.23:0,31,339	0/0:18,0:18:15.31:0,15,410	0/0:19,0:19:21.58:0,22,502	0/0:8,0:8:12.01:0,12,139	0/0:23,0:23:41.61:0,42,580	0/0:31,0:31:24.52:0,25,452	1/1:8,0:8:14.95:117,15,0	1/1:3,8:11:2.83:38,3,0	1/1:5,13:18:15.02:164,15,0	0/0:16,0:16:39.01:0,39,421	0/0:20,0:20:9.97:0,10,322	0/0:29,0:29:49.19:0,49,690	0/0:22,0:22:44.48:0,44,480
chr10	76061926	.	ATATGTG	A	218.31	PASS	AB=0.881;AC=6;AF=0.115;AN=52;BaseQRankSum=1.209;DP=521;FS=1.681;HRun=0;HaplotypeScore=105.4076;InbreedingCoeff=0.1387;MQ=56.54;MQ0=4;MQRankSum=-0.265;QD=2.60;ReadPosRankSum=-0.183;VQSLOD=1.6580;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:25:2.69:16,3,0	0/0:10,0:10:20.22:0,20,428	./.	./.	0/0:19,0:19:30:0,30,445	0/0:18,0:17:45.04:0,45,847	0/0:20,0:20:48.48:0,48,833	0/0:32,0:31:84.46:0,84,841	0/1:17,0:18:31.33:178,0,31	0/0:27,0:27:79.24:0,79,1233	0/0:14,0:14:34.59:0,35,786	0/0:23,1:24:11.08:0,11,261	0/1:4,0:15:5.23:5,0,49	0/0:23,0:23:54.10:0,54,1270	0/0:11,0:11:23.99:0,24,266	0/0:18,0:18:47.94:0,48,702	0/0:18,0:18:28.14:0,28,919	0/0:17,0:17:49.37:0,49,1209	0/0:10,0:10:20.90:0,21,355	0/0:26,0:26:63.12:0,63,1418	0/0:33,0:33:45.06:0,45,967	0/1:9,0:9:91.09:110,0,91	0/0:16,0:17:11.83:0,12,143	0/1:17,0:17:21.49:21,0,91	0/0:17,0:17:45.03:0,45,758	0/0:24,0:23:20.82:0,21,704	0/0:33,0:32:76.64:0,77,1491	0/0:23,0:23:59.98:0,60,914
chr10	76061928	.	ATG	A	494.80	PASS	AB=0.968;AC=20;AF=0.385;AN=52;BaseQRankSum=3.772;DP=520;FS=5.027;HRun=0;HaplotypeScore=71.7215;InbreedingCoeff=-0.3776;MQ=55.17;MQ0=5;MQRankSum=-0.405;QD=1.35;ReadPosRankSum=-0.493;VQSLOD=0.7281;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:0.47:0,0,1	0/1:11,0:11:6.72:7,0,150	./.	./.	0/1:20,0:19:11.44:11,0,101	0/0:18,0:17:6.13:0,6,232	0/0:19,0:19:0.32:0,0,227	0/1:33,0:32:15.33:15,0,72	0/1:16,0:16:9.99:18,0,10	0/1:26,0:26:25.22:25,0,190	0/0:15,0:15:1.18:0,1,279	0/1:25,0:25:40.66:68,0,41	1/1:15,0:15:5.77:34,6,0	0/0:21,0:21:10.73:0,11,335	0/0:11,0:11:5.98:0,6,46	0/1:15,3:18:15.58:16,0,127	0/1:16,2:18:21.71:22,0,223	0/1:20,0:20:34.14:34,0,339	0/1:10,0:10:38.70:39,0,75	0/0:25,0:25:14.79:0,15,462	0/1:33,0:33:33.41:33,0,224	0/1:10,0:10:11.37:11,0,40	0/1:17,0:17:13.98:14,0,38	1/1:17,0:17:14.65:89,15,0	0/0:17,0:17:17.68:0,18,188	0/1:22,1:22:99:104,0,105	0/1:30,2:31:88.75:89,0,339	0/1:18,3:22:11.95:12,0,186
chr10	76062151	.	A	AC	1658.70	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.599;DP=558;FS=0.586;HRun=1;HaplotypeScore=51.1406;InbreedingCoeff=0.9052;MQ=81.97;MQ0=0;MQRankSum=-2.754;QD=36.06;ReadPosRankSum=1.749;VQSLOD=3.5608;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,42:46:99:1754,117,0	0/0:9,0:9:27.09:0,27,350	0/0:21,0:21:26.82:0,27,651	0/0:24,0:25:61.56:0,62,855	0/0:12,0:12:30.10:0,30,390	0/0:18,0:18:54.16:0,54,686	0/0:12,0:12:36.10:0,36,451	0/0:35,0:35:99:0,102,1324	0/0:22,0:22:66.21:0,66,857	0/0:19,0:19:57.19:0,57,740	0/0:17,0:17:48.16:0,48,623	0/0:24,0:24:69.22:0,69,896	0/0:22,0:22:66.15:0,66,818	0/0:11,0:11:33.11:0,33,429	0/0:20,0:20:60.20:0,60,779	0/0:19,0:19:57.19:0,57,740	0/0:26,0:26:78.25:0,78,1012	0/0:20,0:20:54.18:0,54,701	0/0:22,0:22:66.21:0,66,857	0/0:21,0:21:63.20:0,63,817	0/0:24,0:24:69.22:0,69,895	0/0:14,0:14:39.13:0,39,506	0/0:14,0:14:42.09:0,42,502	0/0:16,0:16:48.16:0,48,623	0/0:13,0:13:39.13:0,39,506	0/0:17,1:18:6.18:0,6,566	0/0:21,0:21:60.19:0,60,778	0/0:17,0:17:51.12:0,51,643
chr10	76064935	.	TG	T	1720.66	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=10.016;DP=695;FS=0.565;HRun=1;HaplotypeScore=66.0707;InbreedingCoeff=0.9981;MQ=62.46;MQ0=4;MQRankSum=-2.702;QD=29.67;ReadPosRankSum=0.982;VQSLOD=3.3609;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,58:58:99:1816,132,0	0/0:10,0:10:30.07:0,30,391	0/0:19,0:11:33.02:0,33,384	0/0:20,0:15:45.11:0,45,571	0/0:34,0:34:93.22:0,93,1181	0/0:18,0:18:54.15:0,54,712	0/0:19,0:19:57.12:0,57,701	0/0:34,0:33:92.38:0,92,1185	0/0:21,0:21:63.21:0,63,864	0/0:17,0:17:51.08:0,51,652	0/0:18,0:18:50.96:0,51,604	0/0:30,0:30:90.29:0,90,1227	0/0:20,0:20:60.20:0,60,817	0/0:14,0:14:41.35:0,41,547	0/0:33,0:33:99:0,99,1335	0/0:20,0:20:60.20:0,60,818	0/0:33,0:32:96.30:0,96,1309	0/0:9,0:9:27.09:0,27,373	0/0:21,0:21:63.05:0,63,787	0/0:24,0:24:65.57:0,66,887	0/0:33,0:33:96.17:0,96,1237	0/0:26,0:25:71.97:0,72,884	0/0:22,0:22:63.19:0,63,843	0/0:33,0:33:96.29:0,96,1303	0/0:29,0:29:84.17:0,84,1038	0/0:28,0:28:84.28:0,84,1142	0/0:39,0:39:99:0,117,1480	0/0:13,0:13:38.71:0,39,491
chr10	76065262	.	GGTGTGTGTGTGTGT	G	1265.30	PASS	AB=0.684;AC=11;AF=0.196;AN=56;BaseQRankSum=2.859;DP=749;FS=0.658;HRun=0;HaplotypeScore=250.4268;InbreedingCoeff=0.6946;MQ=57.62;MQ0=13;MQRankSum=-6.312;QD=8.01;ReadPosRankSum=-2.552;VQSLOD=2.1891;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:13.04:0,13,433	0/0:12,0:12:21.05:0,21,560	0/0:45,0:23:5.07:0,5,214	0/0:47,0:23:8.56:0,9,223	0/0:17,0:19:48.08:0,48,1179	0/0:14,0:14:30.07:0,30,663	0/0:41,0:42:84.27:0,84,2001	0/0:29,0:27:36.12:0,36,861	1/1:14,13:26:14.93:271,15,0	0/0:15,0:17:23.22:0,23,706	0/0:14,0:15:24.08:0,24,705	0/1:9,21:27:1.40:15,0,1	1/1:7,14:21:20.75:430,21,0	0/0:28,0:30:57.19:0,57,1510	0/0:24,0:26:51.15:0,51,1410	0/0:20,0:21:39.11:0,39,1219	0/0:39,0:40:79.37:0,79,2062	0/0:31,0:34:84.27:0,84,2377	0/0:16,0:16:27.03:0,27,553	0/0:19,0:24:48.14:0,48,1228	0/0:73,0:74:99:0,159,4357	0/1:8,12:21:3.98:55,0,4	1/1:13,0:13:6.05:442,6,0	1/1:24,0:23:18.70:210,19,0	0/1:18,0:22:3.04:3,0,1124	0/0:28,0:29:57.19:0,57,1563	0/0:20,0:19:33.11:0,33,886	0/0:2,0:2:6.02:0,6,212
chr10	76065286	.	T	TGAG	436.92	PASS	AB=0.841;AC=5;AF=0.089;AN=56;BaseQRankSum=7.034;DP=816;FS=0.823;HRun=0;HaplotypeScore=135.0403;InbreedingCoeff=-0.1109;MQ=48.55;MQ0=38;MQRankSum=-3.806;QD=3.80;ReadPosRankSum=-0.021;VQSLOD=1.9249;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:33:2.34:0,2,437	0/0:8,0:8:20.62:0,21,336	0/0:69,0:13:24.29:0,24,525	0/0:70,0:11:24.07:0,24,378	0/0:20,0:20:54.15:0,54,847	0/0:16,0:16:36.48:0,36,555	0/0:42,0:42:99:0,120,1949	0/0:34,0:29:86.65:0,87,1411	0/1:18,0:19:58.15:58,0,90	0/0:17,0:16:44.98:0,45,672	0/0:14,0:14:30.08:0,30,475	0/0:34,0:30:26.43:0,26,394	0/1:21,2:23:99:197,0,256	0/0:30,0:29:78.17:0,78,1245	0/0:26,0:26:63.21:0,63,1072	0/0:19,0:19:53.69:0,54,893	0/0:38,0:36:90.26:0,90,1467	0/0:37,0:37:99:0,108,1664	0/0:18,0:15:33.06:0,33,476	0/0:21,0:21:60.18:0,60,944	0/0:78,0:74:99:0,193,3078	0/1:19,0:21:45.30:45,0,189	0/1:8,7:15:99:148,0,118	0/1:26,9:35:99:106,0,331	0/0:24,0:23:28.04:0,28,651	0/0:28,0:28:81.25:0,81,1324	0/0:19,0:18:45.62:0,46,762	0/0:2,0:2:6.02:0,6,105
chr10	76065449	.	G	GGT	2519.93	PASS	AB=0.722;AC=13;AF=0.232;AN=56;BaseQRankSum=7.120;DP=814;FS=7.940;HRun=0;HaplotypeScore=118.4001;InbreedingCoeff=0.8791;MQ=50.51;MQ0=48;MQRankSum=-4.559;QD=18.53;ReadPosRankSum=-0.657;VQSLOD=3.1903;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,12:23:37.80:493,38,0	0/0:7,0:7:18.06:0,18,227	0/0:66,0:9:15.50:0,16,163	0/0:65,0:9:9.01:0,9,150	0/0:29,0:28:74.97:0,75,926	0/0:13,0:13:36.11:0,36,451	0/0:30,0:25:70.11:0,70,880	0/0:54,0:45:99:0,102,1289	0/1:8,5:12:14.48:285,0,14	0/0:25,0:17:48.13:0,48,601	0/0:16,0:15:42.13:0,42,526	1/1:8,9:14:24.41:377,24,0	1/1:13,3:14:23.74:347,24,0	0/0:26,0:25:63.15:0,63,769	0/0:28,0:28:72.23:0,72,926	0/0:23,0:23:54.12:0,54,668	0/0:31,1:30:45.74:0,46,904	0/0:33,1:33:16.91:0,17,967	0/0:21,0:16:30.09:0,30,371	0/0:31,0:31:79.98:0,80,959	0/0:88,1:86:99:0,182,2672	1/1:4,11:14:32.97:455,33,0	1/1:7,4:9:12.03:171,12,0	1/1:15,18:29:42.51:581,43,0	0/0:24,0:22:57.13:0,57,698	0/0:33,0:33:93.25:0,93,1177	0/0:22,0:22:60.16:0,60,750	0/0:9,0:8:21.03:0,21,240
chr10	76065466	.	G	GGTGT	2290.46	PASS	AB=0.714;AC=13;AF=0.232;AN=56;BaseQRankSum=2.517;DP=855;FS=33.357;HRun=0;HaplotypeScore=160.8849;InbreedingCoeff=0.8405;MQ=53.51;MQ0=33;MQRankSum=-1.963;QD=13.24;ReadPosRankSum=-4.204;VQSLOD=1.1350;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,1:28:17.82:183,18,0	0/0:10,0:11:27.05:0,27,380	0/0:67,0:16:14.32:0,14,184	0/0:70,0:16:11.99:0,12,138	0/0:30,0:33:69.20:0,69,1018	0/0:13,0:13:18.06:0,18,290	0/0:32,0:29:51.06:0,51,708	0/0:43,0:46:26.75:0,27,333	0/1:9,4:14:39.25:136,0,39	0/0:23,0:23:33.10:0,33,502	0/0:20,0:20:33.11:0,33,517	1/1:14,7:22:17.59:284,18,0	1/1:11,7:18:20.06:463,20,0	0/0:20,0:22:39.12:0,39,582	0/0:22,0:27:38.94:0,39,539	0/0:26,0:27:57.65:0,58,862	0/0:32,0:35:66.02:0,66,1000	0/0:30,0:32:41.45:0,41,726	0/0:14,0:11:10.08:0,10,169	0/0:32,0:36:66.18:0,66,947	0/0:78,0:80:99:0,104,1869	1/1:10,11:22:23.91:511,24,0	1/1:7,7:15:20.50:376,20,0	1/1:16,22:38:6.87:522,7,0	0/0:24,0:24:11.94:0,12,532	0/0:29,0:33:62.21:0,62,884	0/0:19,0:20:27.08:0,27,396	0/0:4,0:4:9.03:0,9,145
chr10	76066150	.	T	TA	1533.62	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.939;DP=593;FS=3.171;HRun=0;HaplotypeScore=56.0118;InbreedingCoeff=0.9821;MQ=89.73;MQ0=0;MQRankSum=-4.753;QD=43.82;ReadPosRankSum=-0.450;VQSLOD=3.8113;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:99:1628,102,0	0/0:5,0:5:15.05:0,15,210	0/0:25,0:25:66.20:0,66,883	0/0:21,0:21:56.78:0,57,711	0/0:17,0:17:47.95:0,48,642	0/0:18,0:18:54.18:0,54,755	0/0:22,0:22:63.21:0,63,876	0/0:27,0:27:81.24:0,81,1073	0/0:22,0:22:60.20:0,60,838	0/0:23,0:23:69.23:0,69,951	0/0:11,0:11:33.04:0,33,437	0/0:35,0:35:99:0,105,1464	0/0:18,0:18:54.17:0,54,733	0/0:18,0:18:51.16:0,51,695	0/0:33,0:33:96.32:0,96,1340	0/0:25,0:25:72.24:0,72,1007	0/0:22,0:22:66.19:0,66,885	0/0:12,0:12:24.08:0,24,336	0/0:20,0:20:51.12:0,51,673	0/0:12,0:12:36.12:0,36,503	0/0:37,0:37:99:0,111,1546	0/0:19,0:19:54.17:0,54,737	0/0:20,0:20:60.14:0,60,799	0/0:24,0:24:72.23:0,72,988	0/0:16,0:16:48.16:0,48,670	0/0:24,0:24:69.22:0,69,950	0/0:14,0:14:42.14:0,42,585	0/0:18,0:18:54.18:0,54,748
chr10	76071672	.	T	TC	5122.53	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-2.868;DP=724;FS=0.352;HRun=5;HaplotypeScore=73.5796;InbreedingCoeff=0.9998;MQ=89.68;MQ0=0;MQRankSum=-1.503;QD=33.26;ReadPosRankSum=2.184;VQSLOD=5.3892;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:98.79:0,99,1028	0/0:10,0:10:29.99:0,30,307	0/0:32,0:32:71.77:0,72,719	0/0:23,0:23:63.13:0,63,657	0/0:27,0:27:78.15:0,78,819	0/0:26,0:26:69.17:0,69,742	0/0:32,0:32:81.15:0,81,850	0/0:31,0:31:87.20:0,87,923	1/1:2,32:34:96.31:1262,96,0	0/0:30,0:29:79.05:0,79,846	0/0:13,0:13:33.06:0,33,346	1/1:2,25:27:66.21:868,66,0	1/1:0,25:25:66.21:867,66,0	0/0:23,0:23:60.13:0,60,637	0/0:24,0:24:69.16:0,69,729	0/0:32,0:32:96.23:0,96,1024	0/0:32,0:32:87.20:0,87,928	0/0:19,0:19:48.10:0,48,505	0/0:29,0:29:75.18:0,75,799	0/0:26,0:26:75.19:0,75,805	0/0:38,0:38:99:0,108,1130	1/1:3,20:23:48.07:608,48,0	1/1:1,13:14:33.02:411,33,0	1/1:3,28:31:84.27:1105,84,0	0/0:16,0:16:48.10:0,48,506	0/0:25,0:25:63.15:0,63,677	0/0:27,0:27:81.20:0,81,869	0/0:20,0:20:60.15:0,60,645
chr10	76072128	.	CCTG	C	2128.42	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.560;DP=454;FS=1.195;HRun=0;HaplotypeScore=77.0497;InbreedingCoeff=0.9952;MQ=88.46;MQ0=0;MQRankSum=-4.158;QD=34.33;ReadPosRankSum=3.583;VQSLOD=4.2255;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:66.23:0,66,1407	0/0:12,0:12:33.11:0,33,704	0/0:15,0:15:36.08:0,36,685	0/0:20,0:21:59.62:0,60,1066	0/0:18,0:18:47.85:0,48,983	0/0:25,0:24:66.23:0,66,1370	0/0:25,0:25:66.20:0,66,1330	0/0:25,0:25:57.18:0,57,1166	1/1:0,8:8:24.08:368,24,0	0/0:14,0:14:36.12:0,36,752	0/0:13,0:13:28.34:0,28,579	1/1:2,9:11:30.10:460,30,0	1/1:1,7:8:24.08:364,24,0	0/0:16,0:16:45.15:0,45,959	0/0:7,0:7:18.06:0,18,384	0/0:10,0:10:30.10:0,30,631	0/0:28,0:28:66.23:0,66,1408	0/0:29,0:29:60.21:0,60,1281	0/0:14,0:14:39.13:0,39,816	0/0:17,0:17:48.16:0,48,1024	0/0:22,0:22:57.20:0,57,1216	1/1:1,9:10:21.07:322,21,0	1/1:0,13:13:33.07:480,33,0	1/1:2,10:12:21.07:322,21,0	0/0:14,0:14:36.12:0,36,768	0/0:11,0:11:30.10:0,30,629	0/0:13,0:13:39.12:0,39,777	0/0:13,0:13:36.12:0,36,751
chr10	76077272	.	A	AG	6704.72	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-14.632;DP=693;FS=0.337;HRun=4;HaplotypeScore=63.0664;InbreedingCoeff=0.9828;MQ=69.79;MQ0=0;MQRankSum=0.171;QD=34.21;ReadPosRankSum=1.374;VQSLOD=5.4069;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:35:81.27:1108,81,0	0/0:11,0:11:30.09:0,30,340	0/0:8,0:8:15.48:0,15,150	0/0:11,0:11:8.18:0,8,148	0/0:13,0:13:24.07:0,24,272	0/0:22,0:22:54.15:0,54,612	0/0:32,0:32:93.26:0,93,1055	0/0:30,0:29:75.21:0,75,845	1/1:4,22:26:60.20:819,60,0	0/0:20,0:20:54.15:0,54,612	0/0:23,0:23:57.16:0,57,646	1/1:1,31:32:78.26:1061,78,0	1/1:2,28:30:84.27:1132,84,0	0/0:44,0:44:99:0,123,1386	0/0:25,0:25:72.19:0,72,807	0/0:23,0:23:69.15:0,69,755	0/0:48,0:49:99:0,138,1536	0/0:15,0:15:42.12:0,42,475	0/0:20,0:20:51.13:0,51,568	0/0:11,0:11:27.08:0,27,306	0/0:68,0:68:99:0,174,1964	1/1:1,19:20:51.17:696,51,0	1/1:1,7:8:18.06:246,18,0	1/1:3,42:45:99:1642,120,0	0/0:20,0:20:57.15:0,57,638	0/0:27,0:27:75.21:0,75,851	0/0:13,0:13:39.11:0,39,442	0/0:12,0:12:33.09:0,33,374
chr10	76078171	.	G	GT	4477.94	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.401;DP=682;FS=1.309;HRun=0;HaplotypeScore=77.9943;InbreedingCoeff=0.9993;MQ=90.07;MQ0=0;MQRankSum=-3.006;QD=42.24;ReadPosRankSum=2.421;VQSLOD=5.5846;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,1952	0/0:9,0:9:27.05:0,27,355	0/0:27,0:27:77.01:0,77,1013	0/0:26,0:26:61.36:0,61,898	0/0:34,0:34:99:0,102,1404	0/0:17,0:17:51.17:0,51,712	0/0:25,0:25:75.23:0,75,1027	0/0:30,0:30:87.29:0,87,1210	1/1:1,15:16:39.13:623,39,0	0/0:30,0:30:87.29:0,87,1214	0/0:19,0:19:57.19:0,57,797	1/1:1,15:16:42.14:659,42,0	1/1:0,14:14:39.13:622,39,0	0/0:26,0:26:78.22:0,78,1053	0/0:28,0:28:84.27:0,84,1157	0/0:19,0:19:57.19:0,57,797	0/0:32,0:32:96.32:0,96,1343	0/0:31,0:31:90.30:0,90,1254	0/0:23,0:23:69.22:0,69,948	0/0:22,0:22:63.20:0,63,863	0/0:47,0:47:99:0,141,1966	1/1:0,16:17:42.14:670,42,0	1/1:0,14:14:42.14:656,42,0	1/1:0,29:29:78.27:1247,78,0	0/0:12,0:12:33.11:0,33,459	0/0:32,0:32:93.31:0,93,1300	0/0:30,0:30:90.28:0,90,1239	0/0:10,0:10:24.08:0,24,334
chr10	76080542	.	CT	C	4774.34	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.216;DP=669;FS=2.294;HRun=9;HaplotypeScore=66.8819;InbreedingCoeff=0.9921;MQ=81.23;MQ0=0;MQRankSum=-5.104;QD=24.11;ReadPosRankSum=4.207;VQSLOD=5.6266;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,37:38:99:988,108,0	0/0:11,0:11:30.08:0,30,338	0/0:16,1:17:10.62:0,11,346	0/0:20,0:20:45.08:0,45,490	0/0:23,0:23:66.16:0,66,733	0/0:15,0:15:39.02:0,39,424	0/0:23,0:23:63.16:0,63,709	0/0:34,0:34:84.22:0,84,945	1/1:0,29:29:87.05:796,87,0	0/0:27,0:27:75.21:0,75,857	0/0:16,0:16:48.09:0,48,529	1/1:5,24:29:59.85:547,60,0	1/1:3,29:32:84.04:769,84,0	0/0:25,0:25:66.18:0,66,751	0/0:34,0:34:93.22:0,93,1058	0/0:25,0:25:63.19:0,63,727	0/0:39,0:39:99:0,108,1246	0/0:19,0:19:54.09:0,54,586	0/0:27,0:27:75.18:0,75,832	0/0:16,0:16:48.08:0,48,537	0/0:24,0:24:66.17:0,66,741	1/1:3,19:22:57.03:522,57,0	1/1:1,16:17:42.02:383,42,0	1/1:2,29:31:84.04:769,84,0	0/0:17,0:17:42.11:0,42,476	0/0:20,0:20:57.16:0,57,649	0/0:30,0:29:87.23:0,87,980	0/0:9,0:9:27.08:0,27,312
chr10	76081125	.	TAA	T	3527.06	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.135;DP=589;FS=6.070;HRun=13;HaplotypeScore=82.0263;InbreedingCoeff=0.9410;MQ=67.41;MQ0=2;MQRankSum=1.850;QD=22.90;ReadPosRankSum=4.119;VQSLOD=3.5461;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,28:36:92.81:879,93,0	0/0:3,0:3:8.99:0,9,76	0/0:13,0:10:3.35:0,3,59	0/0:6,0:6:6.60:0,7,48	0/0:19,0:22:61.63:0,62,751	0/0:23,0:25:59.62:0,60,771	0/0:22,0:26:58.61:0,59,741	0/0:26,0:26:54.17:0,54,762	1/1:3,19:21:56.75:526,57,0	0/0:27,0:27:60.19:0,60,851	0/0:17,0:20:44.05:0,44,506	1/1:4,25:30:71.81:681,72,0	1/1:2,11:14:38.77:361,39,0	0/0:20,0:21:56.65:0,57,732	0/0:23,0:23:60.19:0,60,852	0/0:15,1:17:15.53:0,16,543	0/0:25,0:24:66.15:0,66,869	0/0:28,0:28:75.21:0,75,1047	0/0:17,0:18:42.10:0,42,558	0/0:16,0:16:45.12:0,45,612	0/0:15,0:17:38.60:0,39,497	1/1:4,14:18:42.01:407,42,0	1/1:4,14:18:38.77:378,39,0	1/1:4,10:15:26.90:295,27,0	0/0:28,0:27:60.17:0,60,816	0/0:22,0:22:48.11:0,48,654	0/0:25,0:28:56.51:0,57,714	0/0:22,0:22:56.61:0,57,700
chr10	76081213	.	AT	A	3471.64	PASS	AB=0.958;AC=16;AF=0.286;AN=56;BaseQRankSum=14.155;DP=538;FS=7.307;HRun=10;HaplotypeScore=66.9877;InbreedingCoeff=0.8584;MQ=73.60;MQ0=0;MQRankSum=1.078;QD=19.29;ReadPosRankSum=3.257;VQSLOD=4.6480;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,35:37:98.98:859,99,0	0/0:6,0:6:15.04:0,15,166	0/1:10,1:10:6.11:6,0,113	0/1:11,0:11:4.61:5,0,133	0/0:13,0:13:36.10:0,36,397	0/0:22,0:22:54.15:0,54,597	0/0:19,0:19:57.15:0,57,630	0/0:22,0:22:60.15:0,60,657	1/1:1,21:22:59.99:521,60,0	0/0:37,0:38:93.03:0,93,974	0/0:14,0:14:27.07:0,27,299	1/1:4,20:24:62.95:542,63,0	1/1:3,14:17:35.85:312,36,0	0/0:20,1:21:19.05:0,19,431	0/0:27,0:27:75.20:0,75,830	0/0:15,0:15:45.12:0,45,497	0/0:17,0:17:51.14:0,51,564	0/0:16,0:16:48.10:0,48,519	0/0:21,0:21:33.07:0,33,356	0/0:16,0:16:45.06:0,45,468	0/0:13,0:13:39.11:0,39,431	1/1:2,18:20:44.97:391,45,0	1/1:0,16:16:44.45:383,44,0	1/1:2,18:22:55.04:453,55,0	0/0:12,0:12:33.08:0,33,358	0/0:26,0:26:63.17:0,63,697	0/0:28,0:27:69.19:0,69,763	0/0:12,0:12:36.06:0,36,379
chr10	76081534	.	GACACACAC	G	303.94	PASS	AB=0.881;AC=8;AF=0.148;AN=54;BaseQRankSum=4.930;DP=563;FS=3.390;HRun=0;HaplotypeScore=118.6726;InbreedingCoeff=0.2582;MQ=68.26;MQ0=21;MQRankSum=-3.707;QD=2.58;ReadPosRankSum=0.793;VQSLOD=2.3490;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,7:34:6:101,6,0	0/0:8,0:8:10.83:0,11,234	./.	0/0:45,0:24:0.47:0,0,1	0/0:12,0:15:9.03:0,9,300	0/0:17,0:17:24.55:0,25,864	0/0:26,0:26:9.03:0,9,363	0/0:18,0:17:0.47:0,0,1	0/1:10,2:13:69.83:149,0,70	0/0:19,0:19:24.04:0,24,570	0/0:14,0:14:15.52:0,16,517	0/1:16,0:18:16.13:23,0,16	0/1:12,0:13:16.03:79,0,16	0/0:16,0:15:6.02:0,6,218	0/0:27,0:27:15.05:0,15,465	0/0:23,0:22:33.11:0,33,1012	0/0:17,0:17:27.03:0,27,790	0/0:15,0:15:21.07:0,21,724	0/0:13,0:13:9.03:0,9,305	0/0:13,0:12:12.51:0,13,419	0/0:35,0:30:33.11:0,33,1036	0/0:18,0:18:3.01:0,3,42	1/1:12,0:14:2.90:16,3,0	0/1:21,0:22:15.21:63,0,15	0/0:13,0:13:12.04:0,12,350	0/0:16,0:15:11.95:0,12,159	0/0:16,0:16:18.06:0,18,694	0/0:8,0:8:15.03:0,15,414
chr10	76083679	.	GGT	G	993.54	PASS	AB=0.869;AC=38;AF=0.760;AN=50;BaseQRankSum=2.669;DP=578;FS=5.597;HRun=0;HaplotypeScore=76.9411;InbreedingCoeff=0.4164;MQ=67.49;MQ0=13;MQRankSum=0.516;QD=2.44;ReadPosRankSum=2.153;VQSLOD=1.2746;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,4:39:3.01:32,3,0	1/1:2,0:2:5.98:52,6,0	./.	./.	1/1:9,1:11:6:57,6,0	1/1:15,0:19:12:75,12,0	1/1:26,5:30:5.31:63,5,0	0/0:26,0:24:0.89:0,1,2	0/0:21,0:21:9:0,9,109	./.	0/1:11,0:10:0:0,0,0	1/1:13,0:17:8.52:42,9,0	1/1:10,0:14:8.52:42,9,0	1/1:11,0:11:2.31:30,2,0	1/1:8,0:10:5.84:39,6,0	1/1:12,9:21:6.02:63,6,0	1/1:20,13:31:11.64:109,12,0	0/1:20,11:31:26.47:83,0,26	0/0:19,0:16:2.97:0,3,39	0/0:16,0:16:6:0,6,65	1/1:37,0:37:5.84:63,6,0	1/1:11,0:15:7.90:35,8,0	1/1:16,0:20:5.52:27,6,0	1/1:25,1:36:22.89:130,23,0	1/1:17,2:22:11.70:91,12,0	1/1:22,0:22:3.48:33,3,0	0/0:14,0:14:6:0,6,67	1/1:2,3:4:6.02:63,6,0
chr10	76084815	.	C	CCTCT	1610.74	PASS	AB=0.784;AC=4;AF=0.071;AN=56;BaseQRankSum=-4.764;DP=590;FS=0.831;HRun=0;HaplotypeScore=111.5050;InbreedingCoeff=0.0990;MQ=63.03;MQ0=10;MQRankSum=1.420;QD=8.30;ReadPosRankSum=-0.815;VQSLOD=2.6460;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,21:35:7.07:781,0,7	0/0:16,0:16:39.13:0,39,636	0/1:52,0:17:0.99:1,0,44	0/1:80,0:37:7.96:8,0,123	0/0:17,0:17:20.32:0,20,608	0/0:17,0:19:45.11:0,45,642	0/0:12,0:14:27.07:0,27,374	0/0:34,0:34:3.25:0,3,231	0/0:13,0:13:19.46:0,19,213	0/0:29,0:31:57.16:0,57,823	0/0:14,0:14:18.03:0,18,246	0/0:12,0:12:24.02:0,24,222	0/0:16,0:16:32.95:0,33,288	0/0:14,0:14:24.08:0,24,388	0/0:16,0:16:36.11:0,36,562	0/0:16,0:18:30.09:0,30,446	0/0:24,0:24:45.93:0,46,858	0/1:8,15:25:4.06:916,0,4	0/0:15,0:13:24.07:0,24,368	0/0:17,0:18:33.10:0,33,517	0/0:23,0:23:65.94:0,66,967	0/0:11,0:11:6.62:0,7,70	0/0:10,0:10:5.34:0,5,44	0/0:8,0:8:5.47:0,5,55	0/0:14,0:14:27.08:0,27,419	0/0:9,0:9:9.03:0,9,147	0/0:19,0:19:30.09:0,30,465	0/0:11,0:11:30.06:0,30,438
chr10	76084834	.	CTCTCT	C	1519.57	PASS	AB=0.709;AC=9;AF=0.161;AN=56;BaseQRankSum=10.347;DP=527;FS=15.691;HRun=0;HaplotypeScore=108.4617;InbreedingCoeff=0.6676;MQ=62.23;MQ0=6;MQRankSum=-8.371;QD=23.38;ReadPosRankSum=0.476;VQSLOD=1.9691;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:72.25:0,72,1576	0/0:17,0:17:48.16:0,48,1420	0/0:44,0:20:53.71:0,54,911	0/0:53,0:21:36.23:0,36,735	0/0:17,0:17:51.17:0,51,1556	0/0:21,0:21:60.20:0,60,1592	0/0:12,0:12:33.11:0,33,893	0/0:26,0:26:75.17:0,75,1518	1/1:2,10:12:8.15:378,8,0	0/0:24,0:24:72.25:0,72,2032	0/0:10,0:10:30.10:0,30,822	1/1:2,8:10:29.25:350,29,0	0/1:5,10:15:1.54:407,0,2	0/0:10,0:10:30.10:0,30,915	0/0:15,0:15:45.15:0,45,1332	0/0:15,0:15:45.15:0,45,1140	0/0:22,0:22:61.45:0,61,1896	0/0:21,0:21:54.18:0,54,1355	0/0:17,0:16:48.15:0,48,1218	0/0:16,0:16:45.14:0,45,1246	0/0:26,0:26:78.27:0,78,2292	1/1:2,7:9:27.08:324,27,0	0/1:5,4:9:11.24:131,0,11	0/1:8,2:10:12.27:84,0,12	0/0:13,0:13:36.11:0,36,1080	0/0:11,0:11:33.11:0,33,692	0/0:16,0:16:45.14:0,45,1182	0/0:17,0:17:51.17:0,51,1300
chr10	76088944	.	TTG	T	659.04	PASS	AB=0.959;AC=21;AF=0.375;AN=56;BaseQRankSum=7.074;DP=692;FS=1.195;HRun=0;HaplotypeScore=130.6998;InbreedingCoeff=-0.1702;MQ=51.49;MQ0=20;MQRankSum=-1.550;QD=1.55;ReadPosRankSum=1.527;VQSLOD=2.3037;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:11.99:0,12,104	0/1:14,2:16:32.80:33,0,255	0/0:16,0:3:3.01:0,3,47	0/0:23,0:4:3:0,3,25	0/1:15,5:19:60.33:60,0,214	0/0:18,0:17:1.30:0,1,295	0/0:38,1:38:42.45:0,42,797	0/1:21,4:22:95.24:95,0,302	0/1:23,0:22:4.38:34,0,4	0/0:23,0:22:1.14:0,1,380	0/1:12,0:12:6.70:7,0,84	1/1:14,0:12:5.58:30,6,0	1/1:21,0:21:11.37:77,11,0	0/1:32,0:32:66.89:67,0,595	0/0:21,0:20:20.19:0,20,352	0/1:16,0:16:12.99:13,0,365	0/0:29,7:35:16.25:0,16,598	0/1:31,1:31:62.93:63,0,450	0/0:18,0:18:14.09:0,14,169	0/0:21,0:21:30.07:0,30,382	0/1:53,3:54:79.37:79,0,664	0/1:17,0:17:11:11,0,17	1/1:20,0:18:0.50:70,0,0	1/1:48,0:48:0.44:82,0,0	0/1:28,0:28:57.21:57,0,540	0/1:21,0:20:25.26:25,0,288	0/1:24,0:24:9.79:10,0,339	0/0:6,0:5:2.99:0,3,24
chr10	76091279	.	G	GTAT	992.89	PASS	AB=1.000;AC=9;AF=0.173;AN=52;BaseQRankSum=7.705;DP=1046;FS=18.319;HRun=0;HaplotypeScore=178.0907;InbreedingCoeff=0.8020;MQ=61.70;MQ0=5;MQRankSum=-4.906;QD=11.68;ReadPosRankSum=-1.768;VQSLOD=1.9128;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:50:99:0,129,2056	0/0:11,0:11:33.11:0,33,563	0/0:51,0:42:99:0,112,1864	0/0:64,0:52:97.38:0,97,1989	0/0:24,0:24:65.94:0,66,1187	0/0:32,0:32:90.30:0,90,1630	0/0:29,0:29:84.26:0,84,1497	0/0:59,0:58:99:0,171,2822	1/1:18,5:22:15.94:288,16,0	0/0:72,0:72:99:0,211,3785	0/0:24,0:24:69.22:0,69,1244	1/1:7,5:11:21.03:424,21,0	1/1:8,4:12:23.99:381,24,0	0/0:49,0:49:99:0,144,2541	0/0:48,0:47:99:0,137,2368	0/0:50,0:50:99:0,144,2537	0/0:38,0:38:99:0,111,1907	0/1:25,0:25:42.12:42,0,1020	0/0:21,0:21:62.87:0,63,1061	0/0:34,0:34:99:0,102,1861	0/0:99,0:98:99:0,274,4850	./.	./.	1/1:9,4:12:1.60:5,2,0	0/0:34,0:34:90.28:0,90,1589	0/0:49,0:49:99:0,144,2646	0/0:36,0:36:99:0,105,1886	0/0:29,0:29:78.20:0,78,1320
chr10	76091282	.	A	ATGG	1182.35	PASS	AB=0.826;AC=6;AF=0.115;AN=52;BaseQRankSum=9.636;DP=1052;FS=12.845;HRun=0;HaplotypeScore=188.5691;InbreedingCoeff=0.6904;MQ=61.78;MQ0=5;MQRankSum=-8.481;QD=19.71;ReadPosRankSum=-3.436;VQSLOD=1.5402;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:53:99:0,129,2110	0/0:10,0:10:24.06:0,24,382	0/0:51,0:44:99:0,120,1835	0/0:62,0:50:98.67:0,99,2041	0/0:24,0:24:65.95:0,66,1108	0/0:32,0:32:87.18:0,87,1455	0/0:30,0:30:87.30:0,87,1469	0/0:59,0:58:99:0,156,2530	0/1:19,4:22:1.53:593,0,2	0/0:72,0:72:99:0,211,3529	0/0:26,0:26:75.24:0,75,1242	1/1:8,4:11:23.69:367,24,0	0/1:9,3:12:10.08:256,0,10	0/0:50,0:50:99:0,144,2359	0/0:45,0:44:99:0,129,2198	0/0:50,0:50:99:0,141,2404	0/0:37,0:37:99:0,99,1673	0/0:25,0:25:62.11:0,62,1005	0/0:21,0:21:59.95:0,60,972	0/0:37,0:37:99:0,105,1738	0/0:100,0:99:99:0,270,4543	./.	./.	1/1:9,4:12:5.84:93,6,0	0/0:34,0:35:90.29:0,90,1499	0/0:50,0:50:99:0,141,2377	0/0:35,0:35:99:0,99,1644	0/0:31,0:31:93.27:0,93,1516
chr10	76091299	.	G	GTA	62.06	PASS	AB=0.770;AC=6;AF=0.111;AN=54;BaseQRankSum=5.089;DP=1065;FS=5.215;HRun=0;HaplotypeScore=172.9477;InbreedingCoeff=0.7657;MQ=62.55;MQ0=2;MQRankSum=-3.779;QD=1.17;ReadPosRankSum=-4.459;VQSLOD=0.9923;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:57:99:0,124,1892	0/0:7,0:7:21.02:0,21,276	0/0:45,0:37:99:0,99,1426	0/0:62,0:51:99:0,125,1781	0/0:23,0:23:59.83:0,60,915	0/0:44,0:44:99:0,126,1859	0/0:37,0:37:99:0,105,1561	0/0:55,0:55:99:0,163,2380	0/1:11,4:15:0.11:0,0,0	0/0:72,0:72:99:0,205,2971	0/0:24,0:24:69.22:0,69,1031	1/1:9,3:12:3.51:29,4,0	1/1:10,4:14:14.12:136,14,0	0/0:52,0:52:99:0,153,2221	0/0:57,0:56:99:0,166,2455	0/0:44,0:44:99:0,126,1903	0/0:37,0:37:99:0,108,1603	0/0:27,0:27:72.20:0,72,1050	0/0:23,0:23:63.15:0,63,895	0/0:35,0:35:99:0,105,1584	0/0:104,0:103:99:0,278,4112	0/0:36,0:36:0:0,0,0	./.	0/1:8,4:12:0.03:0,0,0	0/0:30,0:30:81.23:0,81,1176	0/0:50,0:50:99:0,147,2206	0/0:40,0:40:99:0,114,1712	0/0:30,0:30:87.30:0,87,1332
chr10	76091852	.	A	AGT	3104.59	PASS	AB=0.674;AC=9;AF=0.161;AN=56;BaseQRankSum=-3.214;DP=827;FS=4.312;HRun=0;HaplotypeScore=230.0855;InbreedingCoeff=0.5017;MQ=45.14;MQ0=14;MQRankSum=-1.059;QD=14.71;ReadPosRankSum=1.665;VQSLOD=3.5735;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:24.07:0,24,282	0/0:9,0:9:12.03:0,12,141	0/0:50,0:17:11.97:0,12,119	0/0:40,0:18:8.86:0,9,105	0/0:27,0:30:31.73:0,32,407	0/0:20,0:21:29.92:0,30,332	0/0:18,0:21:32.93:0,33,366	0/0:19,0:22:29.75:0,30,309	0/1:18,11:29:39.49:361,0,39	0/0:49,1:52:30.58:0,31,757	0/0:25,0:26:34.94:0,35,390	0/1:19,20:39:21.34:658,0,21	1/1:10,22:32:4.14:739,4,0	0/0:23,0:24:37.17:0,37,388	0/0:36,0:39:53.88:0,54,612	0/0:32,0:32:45.91:0,46,485	0/0:16,0:18:26.74:0,27,274	0/0:8,0:11:14.57:0,15,134	0/0:12,0:12:6:0,6,61	0/0:20,0:21:32.87:0,33,338	0/0:39,0:40:35.82:0,36,422	0/1:21,27:46:22.77:613,0,23	1/1:15,21:37:31.42:693,31,0	1/1:15,10:25:12.02:189,12,0	0/0:19,0:21:35.76:0,36,371	0/0:50,0:51:83.39:0,83,1018	0/0:26,0:26:45.13:0,45,523	0/0:18,0:18:17.88:0,18,191
chr10	76093313	.	CT	C	1746.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.879;DP=690;FS=4.551;HRun=1;HaplotypeScore=68.8303;InbreedingCoeff=0.9989;MQ=91.48;MQ0=0;MQRankSum=-2.825;QD=39.68;ReadPosRankSum=0.430;VQSLOD=4.2664;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:44:99:1841,132,0	0/0:13,0:13:39.13:0,39,621	0/0:32,0:32:93.29:0,93,1403	0/0:26,0:27:63.84:0,64,944	0/0:20,0:20:60.08:0,60,903	0/0:23,0:23:66.20:0,66,1007	0/0:19,0:19:57.19:0,57,911	0/0:33,0:33:99:0,99,1562	0/0:21,0:21:63.20:0,63,984	0/0:23,0:23:69.23:0,69,1085	0/0:15,0:15:45.14:0,45,695	0/0:22,0:22:66.19:0,66,995	0/0:16,0:16:48.16:0,48,767	0/0:19,0:19:57.19:0,57,911	0/0:19,0:19:57.19:0,57,909	0/0:15,0:15:45.13:0,45,674	0/0:37,0:37:99:0,111,1749	0/0:43,0:43:99:0,126,1986	0/0:21,0:21:63.19:0,63,981	0/0:29,0:29:87.24:0,87,1361	0/0:37,0:37:99:0,111,1774	0/0:26,0:26:78.25:0,78,1223	0/0:27,0:27:81.28:0,81,1295	0/0:27,0:27:81.28:0,81,1295	0/0:25,0:25:75.22:0,75,1152	0/0:24,0:24:70.78:0,71,1078	0/0:24,0:24:72.23:0,72,1125	0/0:9,0:9:27.09:0,27,431
chr10	76095246	.	G	GGA	4419.78	PASS	AB=0.967;AC=15;AF=0.268;AN=56;BaseQRankSum=6.931;DP=676;FS=3.180;HRun=0;HaplotypeScore=92.1943;InbreedingCoeff=0.9166;MQ=68.40;MQ0=4;MQRankSum=-1.564;QD=20.00;ReadPosRankSum=2.409;VQSLOD=5.1249;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,43:54:50.03:1930,50,0	0/0:9,0:9:21.07:0,21,267	0/0:19,0:15:30.09:0,30,368	0/1:28,0:23:8.77:9,0,332	0/0:19,0:19:45.14:0,45,573	0/0:12,0:12:24.08:0,24,305	0/0:36,0:36:78.25:0,78,993	0/0:31,0:31:75.24:0,75,953	1/1:4,0:17:30.01:266,30,0	0/0:24,0:24:51.13:0,51,627	0/0:9,0:9:21.07:0,21,267	1/1:7,0:27:50.87:433,51,0	1/1:6,0:22:51.49:453,51,0	0/0:30,0:30:75.24:0,75,953	0/0:22,0:22:51.16:0,51,647	0/0:12,0:12:30.07:0,30,355	0/0:46,0:46:99:0,123,1565	0/0:20,0:20:51.16:0,51,649	0/0:18,0:18:48.13:0,48,583	0/0:12,0:12:36.12:0,36,458	0/0:45,0:45:99:0,105,1319	1/1:7,0:18:30.02:266,30,0	1/1:4,0:13:27.01:239,27,0	1/1:6,0:37:93.04:824,93,0	0/0:22,0:22:45.14:0,45,573	0/0:34,0:34:81.25:0,81,1018	0/0:24,0:24:60.19:0,60,764	0/0:11,0:11:24.08:0,24,306
chr10	76095893	.	C	CT	1746.81	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.699;DP=585;FS=3.270;HRun=8;HaplotypeScore=72.6490;InbreedingCoeff=0.9828;MQ=67.95;MQ0=2;MQRankSum=-1.084;QD=12.57;ReadPosRankSum=-0.416;VQSLOD=3.1916;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:38:20.39:61,20,0	0/0:17,0:17:45.02:0,45,412	0/0:19,0:13:21.87:0,22,239	0/0:19,0:17:32.96:0,33,301	0/0:8,0:8:21:0,21,192	0/0:18,0:18:51.03:0,51,467	0/0:32,0:33:88.60:0,89,800	0/0:36,0:36:84.04:0,84,769	1/1:15,2:17:8.02:231,8,0	0/0:17,0:17:48.02:0,48,437	0/0:15,0:15:24:0,24,220	1/1:14,3:17:44.26:347,44,0	1/1:12,0:12:30.88:238,31,0	0/0:25,0:25:63.02:0,63,577	0/0:16,0:16:35.98:0,36,320	0/0:20,0:20:42.21:0,42,504	0/0:41,0:41:99:0,105,961	0/0:30,0:30:84.04:0,84,768	0/0:24,0:24:54.02:0,54,494	0/0:11,0:11:27.01:0,27,247	0/0:18,0:18:48.02:0,48,439	1/1:12,3:15:36.03:300,36,0	1/1:14,2:16:23.83:249,24,0	1/1:21,3:24:62.13:516,62,0	0/0:17,0:17:48.03:0,48,439	0/0:27,0:27:69.49:0,69,628	0/0:28,0:28:75.03:0,75,686	0/0:7,0:7:21.01:0,21,192
chr10	76095901	.	TC	T	4155.10	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.613;DP=566;FS=9.889;HRun=1;HaplotypeScore=62.2140;InbreedingCoeff=0.9629;MQ=65.18;MQ0=5;MQRankSum=-1.968;QD=31.72;ReadPosRankSum=0.613;VQSLOD=2.1984;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,37:37:99:1375,99,0	0/0:18,0:18:54.13:0,54,709	0/0:18,0:11:21.54:0,22,360	0/0:17,0:15:25.80:0,26,480	0/0:11,0:11:33.04:0,33,392	0/0:19,0:19:57.16:0,57,773	0/0:31,0:31:81.95:0,82,1254	0/0:32,0:32:96.21:0,96,1289	1/1:14,1:15:2.53:317,3,0	0/0:16,0:16:48.15:0,48,669	0/0:12,0:12:33.07:0,33,416	1/1:13,2:15:45.05:518,45,0	1/1:9,4:13:31.81:371,32,0	0/0:21,0:21:63.21:0,63,899	0/0:15,0:15:45.06:0,45,561	0/0:22,0:22:24.60:0,25,806	0/0:37,0:37:99:0,111,1560	0/0:32,0:32:90.27:0,90,1246	0/0:24,0:24:69.11:0,69,884	0/0:10,0:10:27.09:0,27,385	0/0:17,0:17:51.15:0,51,707	1/1:12,3:15:43.79:476,44,0	1/1:11,2:13:32.30:374,32,0	1/1:21,1:22:63.04:726,63,0	0/0:18,0:18:54.15:0,54,735	0/0:27,0:27:75.21:0,75,1014	0/0:30,0:30:87.22:0,87,1147	0/0:7,0:7:21.07:0,21,299
chr10	76095903	.	TC	T	2094.96	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.768;DP=560;FS=2.535;HRun=1;HaplotypeScore=68.7999;InbreedingCoeff=0.9958;MQ=64.42;MQ0=5;MQRankSum=-1.417;QD=23.28;ReadPosRankSum=0.117;VQSLOD=3.6327;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:62.32:0,62,239	0/0:18,0:18:54.11:0,54,693	0/0:18,0:10:26.70:0,27,357	0/0:17,0:15:25.59:0,26,447	0/0:13,0:13:39.08:0,39,500	0/0:19,0:19:57.18:0,57,790	0/0:31,0:31:92.84:0,93,1221	0/0:32,0:32:96.19:0,96,1223	1/1:10,4:14:23.43:393,23,0	0/0:15,0:15:45.13:0,45,625	0/0:12,0:12:33.08:0,33,434	1/1:12,2:14:38.89:346,39,0	1/1:11,2:13:26.62:277,27,0	0/0:22,0:22:66.17:0,66,880	0/0:13,0:13:39.09:0,39,502	0/0:21,0:21:53.93:0,54,811	0/0:37,0:37:99:0,111,1529	0/0:31,0:31:93.22:0,93,1251	0/0:24,0:24:69.15:0,69,849	0/0:11,0:11:30.09:0,30,411	0/0:17,0:17:51.13:0,51,673	1/1:12,3:15:35.69:410,36,0	1/1:11,2:13:17.46:300,17,0	1/1:18,3:21:57.02:556,57,0	0/0:18,0:18:54.17:0,54,751	0/0:26,0:26:75.12:0,75,1041	0/0:29,0:29:84.15:0,84,1080	0/0:7,0:7:21.03:0,21,245
chr10	76096214	.	T	TCA	2040.68	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-9.219;DP=674;FS=3.998;HRun=0;HaplotypeScore=77.3022;InbreedingCoeff=0.9981;MQ=78.80;MQ0=0;MQRankSum=-4.778;QD=47.46;ReadPosRankSum=2.912;VQSLOD=5.1914;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,42:43:99:2136,111,0	0/0:12,0:12:36.08:0,36,525	0/0:18,0:18:42.13:0,42,591	0/0:22,0:21:50.59:0,51,699	0/0:24,0:24:69.23:0,69,1049	0/0:25,0:25:72.24:0,72,1100	0/0:28,0:28:81.26:0,81,1216	0/0:32,0:32:96.32:0,96,1451	0/0:17,0:17:51.17:0,51,780	0/0:30,0:30:90.31:0,90,1377	0/0:13,0:13:39.13:0,39,597	0/0:29,0:29:81.28:0,81,1238	0/0:24,0:24:69.22:0,69,1025	0/0:20,0:20:54.18:0,54,827	0/0:19,0:19:57.19:0,57,872	0/0:12,0:12:36.12:0,36,551	0/0:31,0:31:93.32:0,93,1423	0/0:32,0:32:93.26:0,93,1355	0/0:21,0:21:63.20:0,63,937	0/0:11,0:11:30.10:0,30,458	0/0:52,0:52:99:0,154,2334	0/0:28,0:28:66.21:0,66,985	0/0:21,0:21:63.21:0,63,959	0/0:21,0:21:63.20:0,63,938	0/0:28,0:28:84.27:0,84,1265	0/0:29,0:29:87.28:0,87,1292	0/0:23,0:23:63.21:0,63,965	0/0:9,0:9:27.09:0,27,412
chr10	76098160	.	C	CT	308.54	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=0.291;DP=393;FS=0.000;HRun=11;HaplotypeScore=44.7060;InbreedingCoeff=0.7524;MQ=66.05;MQ0=5;MQRankSum=1.156;QD=10.64;ReadPosRankSum=0.174;VQSLOD=2.1232;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,1:19:13.59:0,14,293	0/0:2,0:2:2.98:0,3,23	0/0:16,0:7:5.69:0,6,42	0/0:12,0:8:4.08:0,4,75	0/0:17,0:17:44.82:0,45,346	0/0:15,0:15:30.25:0,30,227	0/0:7,0:7:17.92:0,18,138	0/0:32,0:29:65.64:0,66,505	1/1:2,3:4:9.02:91,9,0	0/0:25,0:25:62.71:0,63,484	0/0:10,0:11:22.78:0,23,167	1/1:2,3:5:3.01:30,3,0	1/1:3,6:9:20.77:190,21,0	0/0:4,0:4:11.95:0,12,93	0/0:8,0:8:17.92:0,18,139	0/0:14,0:14:35.83:0,36,275	0/0:28,1:30:76.70:0,77,581	0/0:31,0:30:86.67:0,87,673	0/0:25,0:22:50.77:0,51,391	0/0:13,0:13:26.88:0,27,207	0/0:4,0:4:8.95:0,9,70	1/1:1,1:2:3.01:30,3,0	1/1:1,4:6:9.02:91,9,0	1/1:1,1:2:3.01:30,3,0	0/0:22,0:21:56.70:0,57,435	0/0:19,0:19:44.78:0,45,341	0/0:14,0:14:32.85:0,33,255	0/0:22,0:21:38.80:0,39,299
chr10	76098583	.	CTTTTCTTTTCTTTTTT	C	6049.51	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.459;DP=629;FS=3.245;HRun=0;HaplotypeScore=214.3783;InbreedingCoeff=0.9695;MQ=59.12;MQ0=14;MQRankSum=-7.531;QD=40.06;ReadPosRankSum=4.016;VQSLOD=4.3303;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:43:53.82:1587,54,0	0/0:11,0:11:33.11:0,33,1899	0/0:48,0:16:34.45:0,34,540	0/0:72,0:26:58.05:0,58,1352	0/0:19,0:19:51.08:0,51,2536	0/0:8,0:8:24.08:0,24,1397	0/0:23,0:23:66.18:0,66,3241	0/0:29,0:29:74.61:0,75,3449	1/1:0,26:26:38.35:1786,38,0	0/0:26,0:26:63.17:0,63,3618	0/0:9,0:8:21:0,21,895	1/1:4,19:22:12.04:523,12,0	1/1:1,16:17:20.93:962,21,0	0/0:16,0:15:36.12:0,36,1998	0/0:19,0:19:48.14:0,48,2511	0/0:13,0:13:39.12:0,39,2297	0/0:37,0:37:94.84:0,95,5291	0/0:24,0:24:60.20:0,60,2807	0/0:18,0:13:33.09:0,33,1637	0/0:17,0:17:48.16:0,48,2569	0/0:11,0:11:33.07:0,33,1330	1/1:0,19:19:23.97:552,24,0	1/1:1,5:6:6.02:68,6,0	1/1:1,16:17:15.05:572,15,0	0/0:16,0:16:45.09:0,45,2171	0/0:21,0:21:51.15:0,51,2610	0/0:21,0:20:57.18:0,57,3071	0/0:18,0:18:42.03:0,42,1837
chr10	76098593	.	CT	C	258.74	PASS	AB=0.893;AC=22;AF=0.393;AN=56;BaseQRankSum=8.637;DP=648;FS=3.757;HRun=17;HaplotypeScore=106.6911;InbreedingCoeff=0.4366;MQ=55.88;MQ0=14;MQRankSum=-5.942;QD=0.82;ReadPosRankSum=3.779;VQSLOD=-0.3979;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:41:30.53:92,31,0	0/1:10,1:11:1.86:2,0,74	0/1:46,0:10:0.27:0,0,0	0/0:73,0:26:14.88:0,15,74	0/0:19,0:19:30.55:0,31,217	0/1:9,3:13:7.12:7,0,115	0/1:13,2:20:14.32:14,0,123	0/1:26,3:31:0.60:1,0,222	1/1:26,0:26:27.93:85,28,0	0/0:23,4:28:9.38:0,9,274	0/0:14,0:14:1.85:0,2,75	1/1:20,0:19:4.85:14,5,0	1/1:17,0:17:18.37:58,18,0	0/0:16,2:17:1.12:0,1,94	0/0:18,1:19:32.20:0,32,237	0/0:14,0:14:16.59:0,17,216	0/0:36,3:39:19.53:0,20,399	0/0:28,1:29:29.52:0,30,297	0/1:17,2:14:12.81:13,0,82	0/0:24,0:26:36.07:0,36,233	0/1:7,1:8:1.82:2,0,75	1/1:19,1:20:12.31:53,12,0	1/1:6,0:6:7.67:38,8,0	1/1:16,0:17:12.04:44,12,0	0/0:14,0:16:29.68:0,30,218	0/1:14,5:20:12.99:13,0,174	0/0:23,1:24:18.97:0,19,232	0/0:11,1:12:12.15:0,12,169
chr10	76099111	.	C	CA	5490.66	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-13.174;DP=694;FS=2.617;HRun=1;HaplotypeScore=65.2264;InbreedingCoeff=0.9983;MQ=89.08;MQ0=0;MQRankSum=-3.152;QD=39.22;ReadPosRankSum=2.400;VQSLOD=5.6498;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.23:0,90,1134	0/0:18,0:18:51.17:0,51,662	0/0:28,0:28:81.26:0,81,1035	0/0:22,0:22:63.14:0,63,779	0/0:22,0:22:66.21:0,66,856	0/0:25,0:25:72.22:0,72,919	0/0:26,0:26:78.24:0,78,998	0/0:24,0:24:69.22:0,69,885	1/1:2,25:27:33.28:995,33,0	0/0:23,0:23:63.20:0,63,807	0/0:18,0:18:54.18:0,54,701	1/1:2,32:34:90.30:1349,90,0	1/1:0,20:20:51.17:764,51,0	0/0:27,0:27:81.26:0,81,1052	0/0:37,0:37:99:0,108,1402	0/0:26,0:26:78.25:0,78,1013	0/0:29,0:29:87.24:0,87,1098	0/0:26,0:26:75.24:0,75,974	0/0:24,0:24:61.33:0,61,776	0/0:20,0:20:60.20:0,60,779	0/0:51,0:51:99:0,150,1931	1/1:1,23:24:66.22:989,66,0	1/1:0,16:16:48.16:719,48,0	1/1:2,17:19:45.15:675,45,0	0/0:16,0:16:48.16:0,48,623	0/0:25,0:25:72.23:0,72,934	0/0:31,0:31:93.29:0,93,1189	0/0:6,0:6:18.06:0,18,233
chr10	76101887	.	T	TA	2199.02	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-7.177;DP=409;FS=0.000;HRun=7;HaplotypeScore=39.8807;InbreedingCoeff=0.9431;MQ=66.11;MQ0=3;MQRankSum=0.258;QD=24.17;ReadPosRankSum=2.508;VQSLOD=3.4904;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:57.16:677,57,0	0/0:5,0:5:12.02:0,12,116	0/0:13,0:5:0.14:0,0,70	0/0:13,0:9:19.79:0,20,148	0/0:27,0:27:78.05:0,78,734	0/0:19,0:19:51.08:0,51,492	0/0:8,0:8:18.02:0,18,174	0/0:24,0:24:63.10:0,63,608	1/1:2,13:15:27.08:326,27,0	0/0:18,0:18:45.05:0,45,429	0/0:12,0:12:36.05:0,36,342	1/1:1,12:13:30.09:362,30,0	1/1:0,7:7:18.06:217,18,0	0/0:17,0:17:42.07:0,42,406	0/0:15,0:15:42.07:0,42,405	0/0:12,0:12:30.03:0,30,284	0/0:18,0:18:51.07:0,51,486	0/0:12,0:12:30.01:0,30,277	0/0:22,0:22:63.04:0,63,583	0/0:15,0:15:33.04:0,33,318	0/0:10,0:10:30.05:0,30,290	1/1:0,10:10:23.82:232,24,0	1/1:1,10:11:21.54:254,22,0	1/1:2,11:13:27.08:326,27,0	0/0:15,0:15:45.07:0,45,432	0/0:14,0:14:33.05:0,33,319	0/0:18,0:18:51.05:0,51,478	0/0:11,0:11:33.05:0,33,319
chr10	76103548	.	A	ATG	1701.30	PASS	AB=0.812;AC=22;AF=0.423;AN=52;BaseQRankSum=-2.718;DP=535;FS=3.739;HRun=0;HaplotypeScore=89.9844;InbreedingCoeff=0.2365;MQ=63.72;MQ0=6;MQRankSum=0.813;QD=6.16;ReadPosRankSum=-1.457;VQSLOD=2.9295;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,6:17:18.31:166,0,18	0/0:7,0:7:6.02:0,6,67	1/1:24,0:16:2.74:12,3,0	./.	0/0:22,0:22:44.75:0,45,439	0/1:14,0:15:21.64:22,0,162	0/1:10,4:15:36.58:37,0,58	0/0:29,0:29:13.56:0,14,158	1/1:12,0:14:9:78,9,0	0/1:14,12:27:24.69:399,0,25	1/1:11,12:23:27.09:392,27,0	1/1:11,0:11:3:26,3,0	1/1:7,0:8:3:26,3,0	0/0:18,0:18:21.77:0,22,235	0/0:20,0:20:26.95:0,27,271	0/1:12,12:25:39.58:271,0,40	0/1:26,1:30:36.36:36,0,392	0/1:10,0:11:2.51:3,0,129	0/0:20,0:21:10.89:0,11,78	0/0:33,0:35:56.98:0,57,613	0/0:14,0:14:18.03:0,18,192	1/1:11,0:11:3:25,3,0	1/1:17,0:16:11.99:102,12,0	./.	0/1:14,11:25:38.36:275,0,38	0/0:16,0:17:29.90:0,30,300	0/0:19,0:24:38.60:0,39,376	0/0:17,0:17:38.94:0,39,415
chr10	76105515	.	C	CG	2755.35	PASS	AC=14;AF=0.269;AN=52;BaseQRankSum=4.532;DP=356;FS=0.000;HRun=1;HaplotypeScore=63.8280;InbreedingCoeff=0.9610;MQ=37.27;MQ0=59;MQRankSum=-4.093;QD=24.38;ReadPosRankSum=2.038;VQSLOD=3.5630;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,10:15:38.98:468,39,0	0/0:5,0:4:8.99:0,9,97	./.	./.	0/0:14,0:13:29.84:0,30,336	0/0:14,0:12:30.03:0,30,317	0/0:11,0:9:17.94:0,18,210	0/0:15,0:15:29.96:0,30,309	1/1:2,13:14:30.10:444,30,0	0/0:14,0:13:30.08:0,30,355	0/0:12,0:8:11.12:0,11,139	1/1:2,13:13:26.68:366,27,0	1/1:2,13:14:36.12:526,36,0	0/0:15,0:14:42.11:0,42,512	0/0:10,0:8:18.04:0,18,208	0/0:6,0:5:15.05:0,15,192	0/0:20,0:14:30.05:0,30,356	0/0:24,0:11:21.05:0,21,256	0/0:10,0:9:24.03:0,24,278	0/0:12,0:11:33.09:0,33,407	0/0:8,0:7:11.93:0,12,115	1/1:3,12:14:29.76:329,30,0	1/1:3,17:19:42.06:592,42,0	1/1:3,7:7:15.05:222,15,0	0/0:9,0:8:14.99:0,15,163	0/0:10,0:9:21.07:0,21,269	0/0:14,0:13:21.07:0,21,267	0/0:19,0:13:33.05:0,33,389
chr10	76105684	.	GA	G	4161.30	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.706;DP=533;FS=2.150;HRun=7;HaplotypeScore=54.3295;InbreedingCoeff=0.9934;MQ=83.82;MQ0=0;MQRankSum=0.129;QD=26.51;ReadPosRankSum=2.608;VQSLOD=4.4122;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:99:1040,102,0	0/0:4,0:4:12.04:0,12,151	0/0:23,0:23:44.77:0,45,498	0/0:11,0:11:23.97:0,24,240	0/0:17,0:17:45.13:0,45,552	0/0:17,0:17:48.12:0,48,587	0/0:23,0:23:66.18:0,66,801	0/0:25,0:24:60.19:0,60,754	1/1:0,18:18:51.12:520,51,0	0/0:19,0:19:51.16:0,51,642	0/0:16,0:16:45.14:0,45,566	1/1:1,17:17:45.10:459,45,0	1/1:1,22:23:66.15:673,66,0	0/0:16,0:16:42.09:0,42,508	0/0:14,0:14:39.12:0,39,490	0/0:9,0:9:24.07:0,24,290	0/0:30,0:29:84.24:0,84,1029	0/0:22,0:22:60.19:0,60,750	0/0:18,0:18:48.14:0,48,592	0/0:12,0:12:30.08:0,30,353	0/0:27,0:27:66.19:0,66,815	1/1:4,15:19:45.10:459,45,0	1/1:0,10:10:30.07:306,30,0	1/1:2,29:31:69.16:704,69,0	0/0:15,0:15:42.12:0,42,505	0/0:25,0:25:66.17:0,66,812	0/0:22,0:22:60.19:0,60,753	0/0:11,0:11:33.08:0,33,400
chr10	76106153	.	ACACACACTTTCTCTTT	A	1953.67	PASS	AB=0.958;AC=8;AF=0.143;AN=56;BaseQRankSum=4.009;DP=789;FS=28.915;HRun=0;HaplotypeScore=307.6921;InbreedingCoeff=0.1674;MQ=48.77;MQ0=31;MQRankSum=-7.462;QD=9.22;ReadPosRankSum=-0.860;VQSLOD=1.1796;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,1:30:9.14:241,9,0	0/0:8,0:7:7.98:0,8,428	0/1:43,0:2:0:0,0,0	0/0:64,0:9:3:0,3,31	0/0:14,0:14:30.10:0,30,1440	0/0:20,0:20:40.38:0,40,2096	0/0:22,0:22:54.66:0,55,2072	0/0:22,0:21:30.71:0,31,1013	0/1:29,2:31:99:400,0,1218	0/0:25,0:23:51.17:0,51,2942	0/0:16,0:14:36.08:0,36,1583	0/1:23,2:25:99:359,0,1224	0/1:26,2:28:99:755,0,1433	0/0:31,0:31:81.26:0,81,4471	0/0:27,0:27:66.23:0,66,3588	0/0:28,0:28:75.26:0,75,4137	0/0:33,0:33:71.87:0,72,4684	0/0:16,0:15:16.93:0,17,1552	0/0:16,0:14:39.13:0,39,1614	0/0:30,0:30:77.39:0,77,3296	0/0:93,0:91:99:0,171,8926	0/0:16,1:17:17.54:0,18,794	0/1:17,1:18:99:236,0,480	0/1:36,0:36:92.06:92,0,949	0/0:25,0:26:53.95:0,54,3429	0/0:27,0:26:59.46:0,59,3070	0/0:20,0:20:50.85:0,51,2630	0/0:21,0:21:50.85:0,51,2937
chr10	76106155	.	ACACACTTTCTCTTT	A	2036.62	PASS	AB=0.912;AC=7;AF=0.125;AN=56;BaseQRankSum=3.731;DP=795;FS=21.047;HRun=0;HaplotypeScore=287.9170;InbreedingCoeff=0.1083;MQ=49.58;MQ0=31;MQRankSum=-7.217;QD=11.98;ReadPosRankSum=-1.370;VQSLOD=0.8055;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,18:30:8.17:249,8,0	0/0:8,0:7:7.85:0,8,378	0/0:44,0:3:2.68:0,3,42	0/0:64,0:9:6.01:0,6,84	0/0:15,0:15:33.11:0,33,1588	0/0:20,0:20:40.38:0,40,1962	0/0:22,0:22:51.33:0,51,2116	0/0:23,0:22:33.72:0,34,1146	0/1:27,4:31:99:419,0,1219	0/0:25,0:23:51.17:0,51,2844	0/0:16,0:14:36.08:0,36,1568	0/1:22,3:25:99:341,0,1219	0/1:27,2:29:99:763,0,1585	0/0:31,0:31:81.26:0,81,4234	0/0:29,0:29:72.25:0,72,3695	0/0:28,0:28:75.26:0,75,3988	0/0:32,0:32:90.30:0,90,4495	0/0:17,0:16:20.58:0,21,1649	0/0:18,0:15:42.05:0,42,1650	0/0:30,0:30:77.39:0,77,3185	0/0:91,0:89:99:0,171,8641	0/0:18,0:18:20.08:0,20,930	0/1:15,2:17:99:258,0,479	0/1:35,2:36:99:137,0,943	0/0:26,0:26:49.83:0,50,3391	0/0:27,0:26:61.88:0,62,3193	0/0:20,0:20:53.86:0,54,2813	0/0:21,0:21:50.75:0,51,2879
chr10	76106159	.	ACTTTCTCTTT	A	1585.82	PASS	AB=0.846;AC=7;AF=0.125;AN=56;BaseQRankSum=5.310;DP=796;FS=21.731;HRun=0;HaplotypeScore=249.8727;InbreedingCoeff=0.1256;MQ=49.83;MQ0=28;MQRankSum=-7.125;QD=9.33;ReadPosRankSum=-1.456;VQSLOD=1.0585;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:28:10.13:211,10,0	0/0:8,0:7:7.83:0,8,296	0/0:45,0:3:8.38:0,8,83	0/0:58,0:6:12.04:0,12,227	0/0:14,0:14:36.12:0,36,1478	0/0:18,0:18:44.64:0,45,1764	0/0:22,0:22:54:0,54,2411	0/0:24,0:23:69.23:0,69,1759	0/1:26,4:30:99:362,0,1436	0/0:22,0:21:57.19:0,57,2648	0/0:15,0:14:36.09:0,36,1589	0/1:23,5:28:99:236,0,1675	0/1:24,5:29:99:635,0,1505	0/0:33,0:33:93.31:0,93,4221	0/0:28,0:28:72.25:0,72,3320	0/0:32,0:32:87.30:0,87,4321	0/0:34,0:34:94.31:0,94,4298	0/0:17,0:16:4.38:0,4,1659	0/0:20,0:17:51.17:0,51,2159	0/0:30,0:30:80.40:0,80,2952	0/0:90,0:88:99:0,193,8508	0/0:14,5:19:26.57:0,27,1245	0/1:12,4:16:99:189,0,499	0/1:31,7:37:84.80:85,0,1248	0/0:25,0:25:52.70:0,53,3371	0/0:26,0:25:65.78:0,66,3087	0/0:20,0:20:59.57:0,60,2786	0/0:25,0:25:66.57:0,67,3454
chr10	76106199	.	T	TCA	4641.43	PASS	AB=0.667;AC=11;AF=0.196;AN=56;BaseQRankSum=4.497;DP=935;FS=21.255;HRun=0;HaplotypeScore=178.9010;InbreedingCoeff=0.8392;MQ=55.56;MQ0=21;MQRankSum=3.056;QD=24.95;ReadPosRankSum=1.498;VQSLOD=4.1778;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:23.95:0,24,286	0/0:4,0:4:9.03:0,9,108	0/0:41,0:13:26.82:0,27,251	0/0:51,0:19:16.63:0,17,250	0/0:21,0:21:51.14:0,51,600	0/0:28,0:28:47.11:0,47,546	0/0:20,0:20:45.12:0,45,526	0/0:44,0:44:81.98:0,82,1062	1/1:13,20:33:42.11:664,42,0	0/0:33,0:33:73.78:0,74,843	0/0:14,0:15:23.89:0,24,254	1/1:7,25:32:30.24:971,30,0	1/1:15,32:48:63.97:1438,64,0	0/0:44,0:44:96.28:0,96,1139	0/0:42,0:43:74.19:0,74,1104	0/0:41,0:42:95.61:0,96,1080	0/0:42,0:43:86.46:0,86,981	0/0:21,0:21:47.81:0,48,575	0/0:23,0:17:44.83:0,45,489	0/0:26,0:24:46.20:0,46,636	0/0:92,1:92:99:0,125,1834	1/1:7,14:22:2.61:539,3,0	0/1:8,7:16:10.11:311,0,10	1/1:13,21:35:45.02:718,45,0	0/0:33,0:33:65.78:0,66,769	0/0:45,0:46:99:0,106,1317	0/0:19,0:19:45.14:0,45,537	0/0:33,0:32:81.01:0,81,936
chr10	76106479	.	T	TAC	1498.70	PASS	AB=0.848;AC=8;AF=0.143;AN=56;BaseQRankSum=-2.262;DP=888;FS=1.140;HRun=0;HaplotypeScore=143.8396;InbreedingCoeff=0.3613;MQ=55.72;MQ0=15;MQRankSum=2.006;QD=9.19;ReadPosRankSum=-2.491;VQSLOD=3.0355;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:33,6:39:10.62:488,11,0	0/0:9,0:8:14.92:0,15,141	0/0:45,0:18:2.78:0,3,24	0/0:51,0:28:5.96:0,6,51	0/0:17,0:18:17.85:0,18,170	0/1:25,2:26:11.52:12,0,341	0/0:28,0:30:32.57:0,33,300	0/0:40,0:40:2.74:0,3,286	0/0:28,0:29:59.84:0,60,598	0/0:32,0:32:27.02:0,27,307	0/0:16,0:16:24.06:0,24,266	0/0:43,1:43:17.25:0,17,559	0/0:26,0:27:47.80:0,48,497	0/0:35,0:40:59.30:0,59,560	0/0:39,0:43:86.49:0,86,866	0/0:33,0:35:74.68:0,75,768	0/0:34,0:38:60.97:0,61,573	0/0:15,0:14:11.86:0,12,115	0/1:15,8:22:6.63:216,0,7	1/1:9,11:20:24.08:361,24,0	0/0:55,0:55:59.04:0,59,652	0/0:24,1:26:32.74:0,33,326	0/0:19,0:19:18.03:0,18,192	0/0:42,0:43:44.64:0,45,553	0/1:16,1:19:12.80:13,0,271	0/0:42,0:41:20.85:0,21,328	0/1:22,10:33:30.04:550,0,30	0/0:21,0:21:38.44:0,38,420
chr10	76106718	.	GATAC	G	6844.15	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.199;DP=692;FS=3.827;HRun=0;HaplotypeScore=128.9542;InbreedingCoeff=0.9878;MQ=83.71;MQ0=0;MQRankSum=-6.272;QD=48.89;ReadPosRankSum=3.440;VQSLOD=5.7277;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,157,4150	0/0:9,0:9:21.07:0,21,575	0/0:26,0:26:67.97:0,68,1691	0/0:20,0:20:10.79:0,11,1141	0/0:29,0:29:81.26:0,81,2056	0/0:25,0:25:75.24:0,75,1996	0/0:28,0:28:84.20:0,84,1959	0/0:22,0:22:60.20:0,60,1522	1/1:2,24:26:69.24:1337,69,0	0/0:37,0:37:99:0,105,2866	0/0:15,0:15:39.13:0,39,1036	1/1:3,21:24:60.21:1154,60,0	1/1:0,15:15:39.13:755,39,0	0/0:29,0:29:78.27:0,78,2136	0/0:25,0:25:66.23:0,66,1781	0/0:20,0:20:60.21:0,60,1611	0/0:35,0:35:96.33:0,96,2613	0/0:22,0:22:66.23:0,66,1760	0/0:28,0:28:78.26:0,78,2034	0/0:26,0:26:78.25:0,78,2045	0/0:33,0:33:99:0,99,2687	1/1:3,18:21:48.16:930,48,0	1/1:0,23:23:66.23:1273,66,0	1/1:1,30:31:72.25:1395,72,0	0/0:10,0:10:30.10:0,30,811	0/0:26,0:26:72.24:0,72,1880	0/0:26,0:26:78.27:0,78,2136	0/0:5,0:5:15.05:0,15,396
chr10	76108161	.	GC	G	2798.97	PASS	AB=0.526;AC=13;AF=0.232;AN=56;BaseQRankSum=13.888;DP=614;FS=0.000;HRun=6;HaplotypeScore=98.2521;InbreedingCoeff=0.8956;MQ=81.28;MQ0=0;MQRankSum=-4.377;QD=20.14;ReadPosRankSum=-0.503;VQSLOD=2.5259;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,47:49:99:1289,120,0	0/0:8,0:8:21.07:0,21,276	0/0:19,0:19:47.34:0,47,583	0/0:21,0:21:34.49:0,34,558	0/0:15,0:15:39.11:0,39,495	0/0:27,0:27:72.21:0,72,921	0/0:24,0:24:66.21:0,66,868	0/0:29,0:29:75.21:0,75,936	0/1:1,9:10:12.36:231,0,12	0/0:26,0:26:60.18:0,60,763	0/0:19,0:19:57.18:0,57,740	1/1:2,20:22:53.96:561,54,0	1/1:1,12:12:36.08:378,36,0	0/0:11,0:11:30.10:0,30,395	0/0:23,0:23:69.20:0,69,880	0/0:21,0:21:57.17:0,57,736	0/0:26,0:26:78.25:0,78,1026	0/0:18,0:18:54.18:0,54,710	0/0:34,0:34:81.22:0,81,1032	0/0:16,0:16:42.14:0,42,551	0/0:39,0:39:99:0,99,1274	1/1:4,9:12:20.88:194,21,0	1/1:1,9:10:12.03:129,12,0	1/1:1,20:19:17.06:206,17,0	0/0:19,0:19:48.15:0,48,616	0/0:30,0:30:81.21:0,81,1045	0/0:28,0:28:81.25:0,81,1048	0/0:22,0:22:66.21:0,66,868
chr10	76108181	.	G	GAGTCAGACCGCCC	12227.89	PASS	AB=0.700;AC=11;AF=0.196;AN=56;BaseQRankSum=7.513;DP=587;FS=6.896;HRun=0;HaplotypeScore=228.8885;InbreedingCoeff=0.8795;MQ=83.16;MQ0=0;MQRankSum=-13.139;QD=121.07;ReadPosRankSum=-0.759;VQSLOD=3.6566;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:99:0,126,4456	0/0:8,0:8:24.08:0,24,951	0/0:23,0:23:63.21:0,63,2030	0/0:20,0:20:51.11:0,51,1537	0/0:17,0:17:42.14:0,42,1559	0/0:27,0:27:75.24:0,75,2643	0/0:24,0:24:66.20:0,66,2186	0/0:24,0:24:66.21:0,66,2252	0/1:8,5:14:85.79:1800,0,86	0/0:19,0:19:51.18:0,51,1949	0/0:18,0:18:54.17:0,54,1970	1/1:13,8:21:57.18:3168,57,0	1/1:9,6:15:39.13:1984,39,0	0/0:11,0:11:27.09:0,27,1070	0/0:24,0:24:69.22:0,69,2572	0/0:24,0:24:69.24:0,69,2591	0/0:25,0:25:63.21:0,63,2334	0/0:16,0:16:48.16:0,48,1831	0/0:24,0:24:66.22:0,66,2320	0/0:14,0:14:42.13:0,42,1539	0/0:34,0:34:96.33:0,96,3689	1/1:7,10:16:27.09:1624,27,0	1/1:6,4:10:12.51:646,13,0	1/1:16,7:21:51.13:3007,51,0	0/0:17,0:17:45.15:0,45,1600	0/0:25,0:25:72.25:0,72,2786	0/0:23,0:23:69.23:0,69,2541	0/0:21,0:21:60.21:0,60,2270
chr10	76108322	.	CTT	C	1025.09	PASS	AB=0.938;AC=14;AF=0.250;AN=56;BaseQRankSum=9.909;DP=430;FS=3.073;HRun=13;HaplotypeScore=68.1264;InbreedingCoeff=0.7588;MQ=67.20;MQ0=8;MQRankSum=-1.826;QD=11.92;ReadPosRankSum=2.132;VQSLOD=2.4283;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:23.50:0,23,269	0/0:4,0:6:17.03:0,17,190	0/0:30,0:14:1.08:0,1,109	0/1:20,0:12:11.24:11,0,40	0/0:22,0:24:47.12:0,47,597	0/0:16,0:17:47.64:0,48,643	0/0:21,0:21:42.12:0,42,589	0/0:21,0:23:48.11:0,48,622	1/1:0,7:6:15.02:145,15,0	0/0:11,0:12:31.32:0,31,389	0/0:6,0:8:19.30:0,19,234	1/1:2,10:12:30.02:289,30,0	1/1:2,5:7:12:116,12,0	0/1:5,1:7:11.07:11,0,149	0/0:24,0:27:65.67:0,66,839	0/0:17,0:17:45.12:0,45,612	0/0:19,0:22:53.62:0,54,693	0/0:23,0:25:62.64:0,63,799	0/0:9,0:11:33.04:0,33,403	0/0:12,0:13:35.58:0,36,450	0/0:8,0:8:18.95:0,19,260	1/1:4,7:9:21.01:203,21,0	1/1:3,6:8:18.01:174,18,0	1/1:2,11:13:27.04:262,27,0	0/0:14,0:14:33.55:0,34,425	0/0:15,0:16:36.11:0,36,488	0/0:17,0:19:44.06:0,44,507	0/0:3,0:3:9.03:0,9,130
chr10	76111484	.	ACG	A	4128.18	PASS	AB=0.692;AC=13;AF=0.232;AN=56;BaseQRankSum=7.337;DP=478;FS=2.472;HRun=0;HaplotypeScore=69.9004;InbreedingCoeff=0.8600;MQ=76.18;MQ0=0;MQRankSum=-1.856;QD=30.35;ReadPosRankSum=8.848;VQSLOD=4.1279;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:25:26.24:129,26,0	0/0:5,0:5:15.01:0,15,257	0/0:19,0:19:7.29:0,7,504	0/0:18,0:19:28.77:0,29,546	0/0:18,0:18:41.83:0,42,480	0/0:21,0:21:62.87:0,63,802	0/0:29,0:29:81.02:0,81,1136	0/0:10,0:10:26.97:0,27,293	1/1:0,18:18:39.12:627,39,0	0/0:23,0:23:53.98:0,54,594	0/0:11,0:11:26.98:0,27,325	1/1:0,16:19:44.83:701,45,0	1/1:0,22:27:75.25:1199,75,0	0/0:22,0:22:60.50:0,60,774	0/0:13,0:13:38.96:0,39,424	0/0:20,0:20:59.98:0,60,850	0/0:14,0:14:38.98:0,39,553	0/0:28,0:28:74.80:0,75,938	0/0:14,0:14:38.87:0,39,444	0/0:6,0:6:14.96:0,15,141	0/0:32,0:32:84.38:0,84,1031	1/1:0,10:12:30.10:485,30,0	0/1:5,3:9:26.65:178,0,27	1/1:0,19:26:53.39:810,53,0	0/0:10,0:10:29.92:0,30,343	0/0:15,0:15:38.95:0,39,504	0/0:11,0:11:33:0,33,410	0/0:2,0:2:5.99:0,6,49
chr10	76112312	.	AAACCAACCAACCAACCAACCAACC	A	6341.98	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.163;DP=821;FS=0.000;HRun=0;HaplotypeScore=435.6252;InbreedingCoeff=0.9333;MQ=63.18;MQ0=7;MQRankSum=-7.310;QD=29.36;ReadPosRankSum=0.892;VQSLOD=1.5728;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,27:59:17.11:1131,17,0	0/0:12,0:12:27.09:0,27,2399	0/0:28,0:17:12.04:0,12,372	0/0:36,0:25:14.27:0,14,377	0/0:34,0:34:68.82:0,69,5639	0/0:27,0:27:60.18:0,60,5063	0/0:29,0:29:63.18:0,63,3926	0/0:35,0:35:48.15:0,48,2088	1/1:15,24:39:32.73:2056,33,0	0/0:17,0:17:39.13:0,39,3548	0/0:14,0:14:30.10:0,30,2755	1/1:14,17:31:15:942,15,0	1/1:20,19:39:18.06:1114,18,0	0/0:32,0:32:69.24:0,69,7032	0/0:34,0:34:75.26:0,75,5922	0/0:27,0:27:69.24:0,69,5738	0/0:36,0:36:78.25:0,78,6278	0/0:33,0:33:81.28:0,81,7607	0/0:26,0:26:45.12:0,45,2456	0/0:16,0:16:39.13:0,39,3902	0/0:37,0:37:72.25:0,72,6418	1/1:12,18:30:18.06:569,18,0	1/1:8,10:18:8.63:529,9,0	0/0:18,13:30:2.68:0,3,11	0/0:27,0:27:59.57:0,60,4682	0/0:34,0:34:72.24:0,72,6117	0/0:32,0:32:66.23:0,66,5721	0/0:8,0:8:21.07:0,21,2054
chr10	76114048	.	A	AC	4667.82	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-5.993;DP=601;FS=0.774;HRun=6;HaplotypeScore=62.1501;InbreedingCoeff=0.9995;MQ=70.47;MQ0=0;MQRankSum=-2.360;QD=30.51;ReadPosRankSum=1.084;VQSLOD=5.4321;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:32:78.25:980,78,0	0/0:14,0:14:36.05:0,36,358	0/0:28,0:26:60.11:0,60,603	0/0:25,0:24:28.22:0,28,533	0/0:18,0:18:54.12:0,54,550	0/0:24,0:24:66.14:0,66,668	0/0:24,0:24:60.11:0,60,604	0/0:24,0:24:63.14:0,63,643	1/1:1,18:19:42.13:528,42,0	0/0:19,0:19:42.05:0,42,417	0/0:18,0:18:48.10:0,48,488	1/1:0,22:22:57.18:717,57,0	1/1:2,27:29:81.26:1010,81,0	0/0:28,0:28:81.17:0,81,819	0/0:22,0:22:57.10:0,57,568	0/0:20,0:20:57.12:0,57,577	0/0:27,0:26:66.11:0,66,662	0/0:27,0:27:81.09:0,81,804	0/0:13,0:13:36.07:0,36,361	0/0:23,0:23:66.13:0,66,667	0/0:24,0:24:60.13:0,60,612	1/1:3,14:17:33.11:415,33,0	1/1:1,15:16:32.71:413,33,0	1/1:0,18:18:48.15:604,48,0	0/0:14,0:14:33.01:0,33,315	0/0:22,0:22:60.12:0,60,607	0/0:25,0:25:75.17:0,75,764	0/0:9,0:9:27.06:0,27,275
chr10	76114311	.	G	GA	1763.96	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.547;DP=552;FS=7.689;HRun=8;HaplotypeScore=83.3248;InbreedingCoeff=0.9156;MQ=56.60;MQ0=27;MQRankSum=-1.253;QD=14.23;ReadPosRankSum=-1.900;VQSLOD=2.9791;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,18:27:25.94:455,26,0	0/0:11,0:11:26.80:0,27,232	0/0:38,0:8:5.21:0,5,69	0/0:43,0:8:0.13:0,0,3	0/0:23,0:22:32.82:0,33,294	0/0:16,0:16:32.70:0,33,302	0/0:22,0:22:35.96:0,36,326	0/0:16,0:16:23.58:0,24,200	1/1:13,8:21:10.69:322,11,0	0/0:21,0:21:44.88:0,45,411	0/0:12,0:12:23.60:0,24,202	1/1:9,6:15:27.80:264,28,0	1/1:7,4:10:9.91:106,10,0	0/0:18,0:18:32.61:0,33,278	0/0:19,0:19:44.98:0,45,401	0/0:17,0:17:35.86:0,36,310	0/0:37,1:37:22.36:0,22,606	0/0:40,0:40:83.94:0,84,764	0/0:17,0:17:38.11:0,38,306	0/0:15,0:15:36.01:0,36,326	0/0:18,0:18:32.93:0,33,291	1/1:7,5:12:17.82:192,18,0	1/1:5,7:11:18.05:201,18,0	1/1:7,14:21:36.11:415,36,0	0/0:11,0:11:30.01:0,30,271	0/0:9,0:9:15.01:0,15,137	0/0:13,0:13:14.94:0,15,137	0/0:9,0:8:16.89:0,17,143
chr10	76115786	.	AG	A	1151.55	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.256;DP=733;FS=1.400;HRun=2;HaplotypeScore=75.9296;InbreedingCoeff=0.9999;MQ=80.40;MQ0=0;MQRankSum=-2.578;QD=29.53;ReadPosRankSum=0.258;VQSLOD=3.2166;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:39:96.31:1246,96,0	0/0:15,0:15:45.15:0,45,674	0/0:27,0:27:75.25:0,75,1089	0/0:19,0:19:52.15:0,52,793	0/0:25,0:25:75.25:0,75,1118	0/0:22,0:22:66.22:0,66,975	0/0:26,0:26:78.25:0,78,1149	0/0:34,0:34:96.31:0,96,1420	0/0:28,0:28:81.27:0,81,1211	0/0:23,0:23:66.20:0,66,966	0/0:18,0:18:54.18:0,54,798	0/0:28,0:28:84.27:0,84,1238	0/0:29,0:29:87.23:0,87,1233	0/0:35,0:35:99:0,102,1477	0/0:27,0:27:81.26:0,81,1194	0/0:28,0:28:84.28:0,84,1259	0/0:48,0:48:99:0,132,1977	0/0:16,0:16:48.15:0,48,697	0/0:21,0:21:57.15:0,57,791	0/0:21,0:21:63.20:0,63,925	0/0:35,0:35:99:0,105,1574	0/0:26,0:26:75.25:0,75,1113	0/0:27,0:27:75.25:0,75,1124	0/0:25,0:25:75.25:0,75,1122	0/0:20,0:20:57.18:0,57,836	0/0:19,0:19:57.19:0,57,855	0/0:38,0:38:99:0,114,1704	0/0:14,0:14:42.14:0,42,625
chr10	76116270	.	G	GC	2230.92	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.969;DP=592;FS=7.211;HRun=1;HaplotypeScore=87.4638;InbreedingCoeff=0.9580;MQ=71.26;MQ0=18;MQRankSum=-0.784;QD=16.65;ReadPosRankSum=1.237;VQSLOD=3.5990;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,2:11:24.07:325,24,0	0/0:9,0:9:24.08:0,24,309	0/0:35,0:27:75.20:0,75,946	0/0:36,0:26:75.08:0,75,920	0/0:9,0:9:21.06:0,21,258	0/0:21,0:21:45.15:0,45,580	0/0:30,0:29:78.24:0,78,987	0/0:22,0:22:57.60:0,58,707	1/1:3,0:18:8.87:78,9,0	0/0:16,0:16:42.13:0,42,534	0/0:7,0:6:18.06:0,18,225	1/1:3,14:12:15.05:216,15,0	1/1:2,0:19:5.82:25,6,0	0/0:24,0:24:63.20:0,63,817	0/0:21,0:17:51.13:0,51,632	0/0:26,0:26:69.22:0,69,891	0/0:32,0:32:81.23:0,81,1016	0/0:26,0:25:75.20:0,75,937	0/0:15,0:15:45.15:0,45,583	0/0:13,0:13:33.10:0,33,415	0/0:49,0:48:99:0,108,1322	1/1:11,14:25:60.15:811,60,0	1/1:7,12:19:42.10:572,42,0	1/1:8,10:15:29.56:394,30,0	0/0:19,0:19:42.11:0,42,517	0/0:21,0:19:57.19:0,57,739	0/0:17,0:17:48.16:0,48,619	0/0:10,0:9:12.82:0,13,297
chr10	76116271	.	CT	C	648.09	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=10.094;DP=630;FS=5.770;HRun=1;HaplotypeScore=96.9115;InbreedingCoeff=0.8118;MQ=68.01;MQ0=20;MQRankSum=-1.135;QD=5.59;ReadPosRankSum=0.130;VQSLOD=0.4377;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,7:10:20.69:136,21,0	0/0:9,0:9:24.07:0,24,327	0/0:33,0:25:75.22:0,75,990	0/0:36,0:26:75.13:0,75,953	0/0:11,0:11:21.06:0,21,284	0/0:26,0:26:45.15:0,45,609	0/0:35,0:34:78.87:0,79,1053	0/0:27,0:27:51:0,51,743	0/1:18,0:18:13.02:18,0,13	0/0:18,0:17:41.97:0,42,559	0/0:8,0:7:17.99:0,18,228	1/1:16,0:10:3.33:60,3,0	0/0:18,0:18:2.08:0,2,15	0/0:26,0:26:63.21:0,63,891	0/0:23,0:19:50.64:0,51,689	0/0:24,0:26:69.23:0,69,1028	0/0:31,0:33:80.89:0,81,1087	0/0:26,0:25:74.42:0,74,1007	0/0:18,0:18:48.30:0,48,624	0/0:15,0:15:36.10:0,36,484	0/0:55,0:52:99:0,106,1388	1/1:18,5:24:42.54:266,43,0	1/1:18,3:20:29.81:194,30,0	1/1:16,5:17:19.78:144,20,0	0/0:19,0:19:42.12:0,42,548	0/0:24,0:22:57.19:0,57,807	0/0:17,0:17:48.16:0,48,667	0/0:10,0:9:27:0,27,344
chr10	76116315	.	GTC	G	423.17	PASS	AB=1.000;AC=18;AF=0.360;AN=50;BaseQRankSum=7.443;DP=618;FS=25.405;HRun=0;HaplotypeScore=93.4117;InbreedingCoeff=0.0319;MQ=43.38;MQ0=52;MQRankSum=-1.440;QD=1.17;ReadPosRankSum=-2.489;VQSLOD=-0.4030;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:7:0:0,0,0	0/1:8,0:8:27.62:28,0,67	./.	./.	0/0:15,0:14:15:0,15,153	0/1:25,0:25:48.63:49,0,159	0/1:42,0:38:85.78:86,0,243	0/1:27,0:21:41.03:41,0,176	1/1:27,0:22:3.52:30,4,0	0/1:26,0:24:7.22:7,0,222	0/1:13,0:12:3.71:4,0,29	1/1:28,0:18:14.33:99,14,0	0/1:17,0:15:7.60:36,0,8	0/0:24,0:23:32.04:0,32,336	0/0:29,0:23:34.96:0,35,477	0/0:30,0:29:35.41:0,35,664	0/0:31,0:28:34.89:0,35,433	0/1:31,0:30:76.09:76,0,308	0/0:12,0:11:18.21:0,18,213	0/0:18,0:16:7.11:0,7,125	0/1:79,0:70:53.06:53,0,692	1/1:10,1:9:4.54:25,5,0	1/1:23,0:19:3:25,3,0	./.	0/0:11,3:14:11.06:0,11,94	0/0:19,0:17:17.20:0,17,356	0/0:18,0:16:3.42:0,3,268	0/1:5,0:2:16.98:17,0,18
chr10	76116349	.	C	CTG	56.53	PASS	AB=0.896;AC=5;AF=0.089;AN=56;BaseQRankSum=4.620;DP=729;FS=1.638;HRun=0;HaplotypeScore=101.7542;InbreedingCoeff=0.3063;MQ=44.20;MQ0=67;MQRankSum=-4.130;QD=0.56;ReadPosRankSum=-1.283;VQSLOD=1.7417;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,1:16:0.09:0,0,1	0/0:5,0:5:12.04:0,12,172	0/0:32,0:3:8.94:0,9,94	0/0:52,0:9:23.70:0,24,277	0/0:16,0:14:33.11:0,33,470	0/0:21,0:21:48:0,48,685	0/0:37,0:34:75.23:0,75,1053	0/0:33,0:26:63.11:0,63,820	0/1:27,2:22:78.32:78,0,101	0/0:27,0:26:64.18:0,64,847	0/0:11,0:10:8.55:0,9,128	0/0:23,7:20:3.83:0,4,37	0/1:19,4:17:65.46:65,0,151	0/0:24,0:24:63.10:0,63,871	0/0:20,0:19:47.72:0,48,675	0/0:26,0:25:57.14:0,57,773	0/0:32,0:30:69.23:0,69,974	0/0:20,0:21:39.74:0,40,695	0/0:29,0:22:60.14:0,60,786	0/0:24,0:20:33.11:0,33,465	0/0:85,0:74:99:0,142,2060	1/1:14,8:20:0.12:0,0,0	0/0:16,3:16:0.47:0,0,1	0/1:24,3:24:0:0,0,0	0/0:22,0:20:36.07:0,36,452	0/0:17,0:15:39.12:0,39,543	0/0:21,0:20:57.19:0,57,813	0/0:4,0:3:9.03:0,9,129
chr10	76116383	.	GTGTGTC	G	2191.71	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=7.030;DP=744;FS=0.579;HRun=0;HaplotypeScore=153.5121;InbreedingCoeff=0.8671;MQ=55.47;MQ0=34;MQRankSum=-0.336;QD=11.66;ReadPosRankSum=-1.524;VQSLOD=2.2328;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,4:19:5.90:0,6,15	0/0:9,0:9:27.08:0,27,678	0/0:21,0:12:26.76:0,27,313	0/1:55,0:23:3.07:3,0,621	0/0:23,0:21:57.20:0,57,1479	0/0:22,0:21:48.16:0,48,1323	0/0:30,0:28:66.23:0,66,1701	0/0:38,0:32:51.15:0,51,995	1/1:27,8:30:29.99:605,30,0	0/0:19,0:19:39.10:0,39,915	0/0:13,0:12:24.55:0,25,561	1/1:22,5:20:14.45:367,14,0	1/1:14,11:18:33.95:592,34,0	0/0:28,0:28:72.25:0,72,2061	0/0:21,0:21:54.15:0,54,1320	0/0:22,0:22:54.19:0,54,1626	0/0:33,0:33:81.28:0,81,2377	0/0:24,0:24:54.12:0,54,1272	0/0:23,0:18:39.10:0,39,1033	0/0:28,0:26:60.66:0,61,1592	0/0:78,0:73:99:0,163,4204	1/1:16,6:22:23.26:427,23,0	1/1:16,8:24:18.03:370,18,0	0/0:41,0:36:6.14:0,6,18	0/0:16,0:15:45.15:0,45,1336	0/0:17,0:17:42.14:0,42,1026	0/0:26,0:25:75.26:0,75,2190	0/0:4,0:4:12.04:0,12,350
chr10	76116389	.	C	CTGTG	2947.56	PASS	AB=0.789;AC=14;AF=0.250;AN=56;BaseQRankSum=7.666;DP=737;FS=1.776;HRun=0;HaplotypeScore=132.0111;InbreedingCoeff=0.8564;MQ=59.56;MQ0=22;MQRankSum=-3.024;QD=12.18;ReadPosRankSum=-1.921;VQSLOD=3.2784;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,18:25:0.23:0,0,0	0/0:9,0:9:27.09:0,27,482	0/0:16,0:15:31.63:0,32,418	0/1:46,0:23:3.56:4,0,576	0/0:23,0:21:57.20:0,57,1023	0/0:23,0:22:57.15:0,57,941	0/0:29,0:29:78.22:0,78,1321	0/0:40,0:36:80.98:0,81,1163	1/1:21,11:30:36.11:795,36,0	0/0:22,0:22:51.15:0,51,821	0/0:13,0:13:29.93:0,30,506	1/1:15,7:18:22.32:464,22,0	1/1:17,6:17:42.13:924,42,0	0/0:28,0:28:81.23:0,81,1399	0/0:21,0:21:57.18:0,57,984	0/0:19,0:19:57.18:0,57,1016	0/0:31,0:31:81.28:0,81,1477	0/0:26,0:26:62.76:0,63,1017	0/0:24,0:19:50.09:0,50,749	0/0:28,0:26:65.83:0,66,1123	0/0:76,0:73:99:0,183,3102	1/1:19,7:26:27.22:461,27,0	1/1:18,4:22:24.07:471,24,0	1/1:11,32:41:0.47:1,0,0	0/0:17,0:16:45.15:0,45,826	0/0:16,0:16:48.16:0,48,835	0/0:29,0:28:78.25:0,78,1385	0/0:5,0:5:15.03:0,15,237
chr10	76116509	.	G	GCT	9460.68	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-10.487;DP=716;FS=3.742;HRun=0;HaplotypeScore=86.4296;InbreedingCoeff=0.9998;MQ=84.12;MQ0=0;MQRankSum=-1.727;QD=49.79;ReadPosRankSum=2.659;VQSLOD=5.7767;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:87.30:1610,87,0	0/0:11,0:11:33.11:0,33,486	0/0:23,0:23:51.13:0,51,683	0/0:24,0:24:58.44:0,58,817	0/0:20,0:20:60.18:0,60,844	0/0:16,0:16:45.15:0,45,663	0/0:25,0:25:72.24:0,72,1060	0/0:32,0:32:93.31:0,93,1353	1/1:0,24:24:60.21:1123,60,0	0/0:35,0:35:99:0,102,1500	0/0:12,0:12:33.11:0,33,486	1/1:1,22:23:63.22:1179,63,0	1/1:0,20:20:60.21:1123,60,0	0/0:17,0:17:51.17:0,51,751	0/0:19,0:19:57.19:0,57,839	0/0:44,0:44:99:0,126,1836	0/0:38,0:38:99:0,111,1633	0/0:37,0:37:99:0,111,1630	0/0:27,0:27:74.98:0,75,1098	0/0:24,0:24:63.19:0,63,889	0/0:38,0:38:99:0,111,1596	1/1:2,33:36:96.33:1786,96,0	1/1:1,25:26:69.24:1292,69,0	1/1:1,28:29:72.25:1349,72,0	0/0:22,0:22:66.22:0,66,972	0/0:24,0:24:72.24:0,72,1061	0/0:28,0:28:78.26:0,78,1148	0/0:10,0:10:30.10:0,30,442
chr10	76117833	.	CT	C	1078.87	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.001;DP=654;FS=1.477;HRun=2;HaplotypeScore=62.6589;InbreedingCoeff=0.9939;MQ=85.29;MQ0=0;MQRankSum=-3.088;QD=35.96;ReadPosRankSum=1.241;VQSLOD=4.2232;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:84.28:1174,84,0	0/0:7,0:7:21.04:0,21,280	0/0:26,0:26:71.08:0,71,1060	0/0:19,0:19:49.85:0,50,700	0/0:30,0:30:90.28:0,90,1359	0/0:22,0:22:66.20:0,66,1008	0/0:24,0:24:72.23:0,72,1105	0/0:21,0:21:63.20:0,63,927	0/0:22,0:22:66.22:0,66,1030	0/0:40,0:40:99:0,120,1861	0/0:14,0:14:42.13:0,42,636	0/0:27,0:27:81.28:0,81,1265	0/0:20,0:20:60.20:0,60,939	0/0:23,0:23:69.22:0,69,1057	0/0:22,0:22:66.22:0,66,1027	0/0:25,0:25:75.26:0,75,1173	0/0:25,0:25:75.26:0,75,1173	0/0:9,0:9:26.92:0,27,390	0/0:34,0:34:99:0,102,1518	0/0:33,0:33:99:0,99,1491	0/0:34,0:34:99:0,99,1541	0/0:29,0:29:84.23:0,84,1245	0/0:17,0:17:51.16:0,51,769	0/0:31,0:31:93.32:0,93,1449	0/0:21,0:21:63.18:0,63,939	0/0:24,0:24:72.25:0,72,1127	0/0:16,0:16:48.16:0,48,751	0/0:9,0:9:27.09:0,27,420
chr10	76122048	.	TA	T	3844.39	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=14.363;DP=613;FS=26.268;HRun=7;HaplotypeScore=63.8025;InbreedingCoeff=0.9043;MQ=76.82;MQ0=0;MQRankSum=-1.572;QD=24.96;ReadPosRankSum=1.023;VQSLOD=1.9830;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:81.18:826,81,0	0/0:5,0:5:15.05:0,15,189	0/0:17,0:17:23.32:0,23,329	0/1:8,0:8:18.40:18,0,126	0/0:36,0:36:96.29:0,96,1180	0/0:25,0:25:72.20:0,72,879	0/0:12,0:12:30.10:0,30,377	0/0:37,0:37:99:0,102,1284	1/1:1,17:18:48.11:490,48,0	0/0:26,0:26:69.22:0,69,866	0/0:17,0:17:48.14:0,48,592	1/1:0,24:24:66.15:673,66,0	1/1:1,21:22:63.14:643,63,0	0/0:22,0:22:60.18:0,60,742	0/0:30,0:30:87.28:0,87,1094	0/0:31,0:31:93.30:0,93,1170	0/0:35,0:35:99:0,102,1268	0/0:19,0:19:57.18:0,57,717	0/0:20,0:20:48.15:0,48,604	0/0:24,0:24:72.23:0,72,906	0/0:17,0:17:51.16:0,51,642	1/1:0,17:17:48.11:490,48,0	1/1:3,14:17:33.04:337,33,0	1/1:2,13:15:36.08:367,36,0	0/0:20,0:20:60.19:0,60,755	0/0:26,0:26:75.24:0,75,944	0/0:33,0:33:90.29:0,90,1131	0/0:6,0:6:15.05:0,15,189
chr10	76122169	.	G	GCA	5706.95	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-11.825;DP=735;FS=4.016;HRun=0;HaplotypeScore=78.7323;InbreedingCoeff=0.9650;MQ=59.81;MQ0=11;MQRankSum=0.947;QD=32.43;ReadPosRankSum=6.146;VQSLOD=6.9412;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,26:44:99:1814,111,0	0/0:7,0:7:17.97:0,18,198	0/0:63,0:19:41.79:0,42,444	0/0:53,0:21:35.84:0,36,315	0/0:17,0:17:48.13:0,48,593	0/0:29,0:29:75.19:0,75,932	0/0:15,0:15:42.14:0,42,544	0/0:24,0:24:60.13:0,60,740	1/1:2,21:23:15.17:823,15,0	0/0:25,0:25:69.21:0,69,866	0/0:14,0:14:27.09:0,27,351	1/1:3,20:24:36.12:612,36,0	1/1:3,22:24:45.15:765,45,0	0/0:19,0:19:51.12:0,51,615	0/0:34,0:34:96.24:0,96,1172	0/0:21,1:22:5.91:0,6,649	0/0:36,0:36:99:0,99,1209	0/0:24,0:24:66.21:0,66,852	0/0:22,0:22:50.19:0,50,613	0/0:17,0:17:39.11:0,39,481	0/0:52,0:51:99:0,126,1578	1/1:4,14:18:33.11:561,33,0	1/1:2,10:12:21.03:355,21,0	1/1:5,24:29:47.90:777,48,0	0/0:23,0:23:60.17:0,60,753	0/0:24,0:23:60.18:0,60,755	0/0:35,0:34:99:0,102,1267	0/0:3,0:3:9:0,9,99
chr10	76123481	.	C	CATA	10091.18	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-10.612;DP=734;FS=0.000;HRun=0;HaplotypeScore=102.6566;InbreedingCoeff=0.9999;MQ=81.52;MQ0=0;MQRankSum=-5.156;QD=58.00;ReadPosRankSum=0.992;VQSLOD=6.4591;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.28:0,90,1497	0/0:15,0:15:42.13:0,42,690	0/0:19,0:19:51.17:0,51,828	0/0:21,0:21:57.19:0,57,965	0/0:21,0:21:63.20:0,63,1042	0/0:22,0:22:66.23:0,66,1126	0/0:26,0:26:78.25:0,78,1299	0/0:29,0:29:87.28:0,87,1432	1/1:1,31:32:87.30:2004,87,0	0/0:22,0:22:63.22:0,63,1067	0/0:21,0:21:63.20:0,63,1033	1/1:4,29:36:87.30:2000,87,0	1/1:2,19:21:54.19:1232,54,0	0/0:34,1:35:33.14:0,33,1619	0/0:31,0:31:84.27:0,84,1407	0/0:18,0:18:54.18:0,54,921	0/0:45,0:45:99:0,135,2248	0/0:21,0:21:60.20:0,60,999	0/0:26,0:26:78.24:0,78,1279	0/0:25,0:25:72.25:0,72,1220	0/0:29,0:29:81.25:0,81,1320	1/1:4,32:38:96.30:2162,96,0	1/1:2,21:23:56.76:1311,57,0	1/1:1,22:24:60.21:1382,60,0	0/0:19,0:19:57.20:0,57,970	0/0:32,0:32:96.33:0,96,1628	0/0:33,0:32:99:0,99,1688	0/0:18,0:18:51.17:0,51,825
chr10	76123689	.	ACC	A	4071.74	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.662;DP=599;FS=7.563;HRun=10;HaplotypeScore=85.9629;InbreedingCoeff=0.9528;MQ=81.80;MQ0=0;MQRankSum=-0.991;QD=26.79;ReadPosRankSum=6.723;VQSLOD=3.1775;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:37:36.53:0,37,378	0/0:11,0:11:30.09:0,30,453	0/0:30,0:29:77.88:0,78,1103	0/0:17,0:18:22.75:0,23,363	0/0:25,0:26:59.68:0,60,885	0/0:19,0:22:53.66:0,54,799	0/0:20,0:20:42.14:0,42,663	0/0:7,0:18:45.06:0,45,476	1/1:3,17:20:6.54:520,7,0	0/0:22,0:22:39.12:0,39,597	0/0:16,1:17:5.65:0,6,490	1/1:3,23:26:63.15:702,63,0	1/1:2,26:29:66.10:793,66,0	0/0:5,0:16:15.02:0,15,143	0/0:23,0:25:68.19:0,68,990	0/0:16,0:17:47.65:0,48,711	0/0:10,0:10:27.09:0,27,423	0/0:17,0:19:53.57:0,54,758	0/0:11,0:11:21.03:0,21,296	0/0:16,0:17:41.61:0,42,599	0/0:25,0:27:65.66:0,66,911	1/1:0,24:24:63.13:687,63,0	1/1:5,19:24:57.13:633,57,0	1/1:5,24:29:66.17:736,66,0	0/0:18,0:22:49.62:0,50,663	0/0:22,0:23:50.64:0,51,725	0/0:29,0:30:83.61:0,84,1210	0/0:8,0:9:23.57:0,24,342
chr10	76124113	.	A	AG	10358.66	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-17.377;DP=762;FS=5.889;HRun=0;HaplotypeScore=71.4482;InbreedingCoeff=0.9969;MQ=84.88;MQ0=0;MQRankSum=-7.337;QD=43.34;ReadPosRankSum=5.398;VQSLOD=5.1733;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,62:62:99:2781,175,0	0/0:5,0:5:15.04:0,15,195	0/0:24,0:24:69.17:0,69,922	0/0:27,0:27:54.40:0,54,967	0/0:21,0:21:57.18:0,57,780	0/0:21,0:21:60.20:0,60,839	0/0:28,0:28:84.27:0,84,1158	0/0:27,0:27:81.26:0,81,1119	1/1:2,36:38:99:1583,99,0	0/0:36,0:36:99:0,108,1481	0/0:19,0:19:57.19:0,57,796	1/1:2,30:32:72.25:1151,72,0	1/1:0,35:35:99:1630,102,0	0/0:27,0:27:78.24:0,78,1060	0/0:33,0:33:93.30:0,93,1283	0/0:23,0:23:69.23:0,69,965	0/0:43,0:43:99:0,129,1767	0/0:20,0:20:60.18:0,60,820	0/0:20,0:20:60.18:0,60,816	0/0:34,0:34:99:0,102,1409	0/0:37,0:37:99:0,108,1508	1/1:0,19:19:54.18:863,54,0	1/1:1,16:17:45.08:719,45,0	1/1:0,36:36:99:1631,102,0	0/0:15,0:15:45.14:0,45,614	0/0:29,0:29:87.29:0,87,1217	0/0:25,0:24:75.24:0,75,1031	0/0:9,0:9:27.09:0,27,377
chr10	76124919	.	C	CT	260.43	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=5.336;DP=364;FS=1.147;HRun=1;HaplotypeScore=56.4826;InbreedingCoeff=0.3577;MQ=47.62;MQ0=16;MQRankSum=-1.445;QD=10.85;ReadPosRankSum=3.081;VQSLOD=1.8214;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,4:20:0.03:334,0,0	0/0:7,0:7:15.04:0,15,194	./.	./.	0/0:17,0:17:20.58:0,21,268	0/0:17,0:17:29.99:0,30,385	0/0:13,0:12:23.99:0,24,290	0/0:18,0:17:39.09:0,39,515	0/0:8,0:8:19.29:0,19,108	0/0:15,0:14:32.66:0,33,454	0/0:11,0:10:15.04:0,15,192	0/0:3,0:3:8.04:0,8,33	0/0:10,0:7:11.75:0,12,74	0/0:15,0:14:30.07:0,30,397	0/0:19,0:18:36.09:0,36,479	0/0:14,0:14:27.07:0,27,365	0/0:29,0:28:57.14:0,57,748	0/0:17,0:17:27.09:0,27,376	0/0:15,0:12:32.86:0,33,401	0/0:12,0:11:24.04:0,24,281	0/0:9,0:9:24.55:0,25,330	0/0:10,0:9:12.45:0,12,103	0/0:7,0:5:2.97:0,3,20	0/0:6,0:6:2.90:0,3,17	0/0:15,0:15:27.09:0,27,377	0/0:12,0:12:33.11:0,33,461	0/0:22,0:21:47.62:0,48,606	0/0:4,0:3:9.03:0,9,123
chr10	76124920	.	C	CG	626.66	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=3.853;DP=407;FS=1.498;HRun=1;HaplotypeScore=68.6807;InbreedingCoeff=0.8748;MQ=49.53;MQ0=16;MQRankSum=-3.293;QD=7.37;ReadPosRankSum=1.061;VQSLOD=0.8933;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:26:23.92:347,24,0	0/0:7,0:7:14.87:0,15,156	0/0:9,0:2:0.20:0,0,1	./.	0/0:18,0:18:19.13:0,19,163	0/0:21,0:21:28.17:0,28,245	0/0:12,0:11:20.75:0,21,163	0/0:18,0:17:38.82:0,39,330	1/1:8,1:9:20.53:141,21,0	0/0:17,0:16:29.75:0,30,255	0/0:10,0:9:14.78:0,15,103	1/1:5,1:6:8.80:54,9,0	1/1:8,2:7:11.76:85,12,0	0/0:18,0:17:32.01:0,32,308	0/0:23,0:22:35.89:0,36,327	0/0:14,0:14:26.75:0,27,234	0/0:32,0:31:59.96:0,60,576	0/0:19,0:19:35.84:0,36,333	0/0:13,0:10:27.98:0,28,227	0/0:13,0:12:21.21:0,21,140	0/0:10,0:10:21.30:0,21,178	1/1:10,1:10:14.57:117,15,0	1/1:8,1:7:2.80:13,3,0	1/1:7,1:8:5.91:47,6,0	0/0:17,0:17:26.93:0,27,266	0/0:12,0:12:32.99:0,33,313	0/0:25,0:24:39.39:0,39,391	0/0:6,0:5:8.98:0,9,86
chr10	76124936	.	A	AAGAG	173.71	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=1.416;DP=484;FS=0.000;HRun=0;HaplotypeScore=109.0908;InbreedingCoeff=0.3911;MQ=59.91;MQ0=9;MQRankSum=0.422;QD=2.48;ReadPosRankSum=0.085;VQSLOD=1.8192;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,15:33:12.04:256,12,0	0/0:10,0:10:30.09:0,30,440	0/1:13,0:4:3.92:4,0,37	0/1:17,0:10:12.48:12,0,115	0/0:18,0:18:39.11:0,39,545	0/0:20,0:20:39.13:0,39,568	0/0:15,0:14:24.06:0,24,327	0/0:33,0:32:45.59:0,46,662	0/0:11,0:11:21.04:0,21,216	0/0:15,0:15:24.06:0,24,343	0/0:9,0:8:18.06:0,18,269	0/0:11,0:12:21.05:0,21,221	0/0:12,0:9:3.01:0,3,32	0/0:18,0:18:36.12:0,36,553	0/0:23,0:23:36.12:0,36,529	0/0:14,0:14:18.06:0,18,264	0/0:30,0:30:54.13:0,54,751	0/0:21,0:21:27.04:0,27,356	0/0:18,0:16:15.05:0,15,232	0/0:18,0:17:27.09:0,27,390	0/0:10,0:10:15.05:0,15,224	0/0:15,0:14:18.03:0,18,183	0/0:14,0:12:17.99:0,18,179	0/0:9,0:9:6.48:0,6,56	0/0:17,0:17:27.08:0,27,403	0/0:23,0:23:45.15:0,45,671	0/0:21,0:20:32.78:0,33,510	0/0:6,0:5:15.05:0,15,222
chr10	76124937	.	AGAGAG	A	1532.17	PASS	AB=0.919;AC=13;AF=0.232;AN=56;BaseQRankSum=5.776;DP=443;FS=4.982;HRun=0;HaplotypeScore=85.8875;InbreedingCoeff=0.8198;MQ=61.86;MQ0=9;MQRankSum=-7.505;QD=16.84;ReadPosRankSum=-6.077;VQSLOD=0.7088;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:30:66.27:66,0,241	0/0:10,0:10:30.10:0,30,801	0/0:14,0:5:14.96:0,15,254	0/0:17,0:10:23.77:0,24,373	0/0:16,0:16:38.16:0,38,967	0/0:19,0:19:37.58:0,38,1030	0/0:12,0:12:24.28:0,24,625	0/0:34,0:33:69.75:0,70,1764	1/1:7,1:9:23.52:384,24,0	0/0:14,0:14:24.31:0,24,651	0/0:8,0:7:21.07:0,21,541	1/1:1,5:10:28.34:435,28,0	1/1:5,3:7:13.16:120,13,0	0/0:19,0:19:38.16:0,38,1052	0/0:20,0:20:38.86:0,39,953	0/0:13,0:13:3.82:0,4,488	0/0:27,0:26:56.80:0,57,1405	0/0:21,0:21:33.97:0,34,769	0/0:17,0:15:18.65:0,19,601	0/0:16,0:15:24.55:0,25,708	0/0:10,0:10:20.81:0,21,509	1/1:6,2:11:25.06:345,25,0	1/1:6,3:11:23.79:314,24,0	1/1:2,3:8:3.48:49,3,0	0/0:17,0:17:27.42:0,27,680	0/0:22,0:22:53.56:0,54,1314	0/0:15,0:19:14.54:0,15,955	0/0:6,0:5:15.05:0,15,407
chr10	76124939	.	AGAG	A	945.99	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.033;DP=411;FS=13.766;HRun=0;HaplotypeScore=69.7234;InbreedingCoeff=0.8851;MQ=63.13;MQ0=6;MQRankSum=-5.387;QD=17.20;ReadPosRankSum=-2.929;VQSLOD=1.2929;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:30:23.69:0,24,371	0/0:10,0:10:30.10:0,30,720	0/0:15,0:6:14.24:0,14,253	0/0:17,0:10:24.44:0,24,380	0/0:14,0:14:39.13:0,39,902	0/0:16,0:16:39.11:0,39,918	0/0:10,0:10:24.96:0,25,569	0/0:33,0:33:75.23:0,75,1655	1/1:8,1:9:21.07:276,21,0	0/0:15,0:15:33.02:0,33,653	0/0:8,0:7:21.07:0,21,478	1/1:8,2:10:27.44:309,27,0	1/1:8,0:7:5.04:62,5,0	0/0:15,0:15:39.13:0,39,916	0/0:18,0:18:39.09:0,39,830	0/0:9,0:9:21.07:0,21,472	0/0:23,0:23:57.02:0,57,1265	0/0:18,0:18:39.10:0,39,797	0/0:17,0:15:35.77:0,36,647	0/0:15,0:15:27.05:0,27,645	0/0:11,0:11:27.08:0,27,560	1/1:10,0:10:19.24:194,19,0	1/1:9,1:10:2.64:218,3,0	1/1:8,0:8:3:52,3,0	0/0:13,0:13:27.02:0,27,601	0/0:21,0:21:57.14:0,57,1194	0/0:16,0:15:41.80:0,42,924	0/0:8,0:7:21.07:0,21,452
chr10	76124990	.	G	GCAC	4113.94	PASS	AB=0.941;AC=13;AF=0.232;AN=56;BaseQRankSum=-1.987;DP=478;FS=0.512;HRun=0;HaplotypeScore=80.8158;InbreedingCoeff=0.8956;MQ=73.69;MQ0=0;MQRankSum=-4.121;QD=46.22;ReadPosRankSum=2.311;VQSLOD=5.2814;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:75.26:0,75,1238	0/0:14,0:14:39.13:0,39,621	0/0:11,0:11:33.11:0,33,496	0/0:25,0:23:49.52:0,50,716	0/0:16,0:16:48.16:0,48,792	0/0:15,0:15:39.13:0,39,631	0/0:19,0:19:54.18:0,54,894	0/0:21,0:21:63.19:0,63,1022	1/1:0,9:11:27.09:610,27,0	0/0:19,0:19:54.18:0,54,899	0/0:9,0:9:27.08:0,27,424	1/1:1,10:11:30.10:678,30,0	1/1:0,11:10:24.08:543,24,0	0/0:15,0:15:45.15:0,45,736	0/0:16,0:16:45.15:0,45,743	0/1:15,1:16:28.87:29,0,552	0/0:25,0:25:60.18:0,60,967	0/0:25,0:25:69.24:0,69,1148	0/0:14,0:14:33.09:0,33,501	0/0:13,0:13:39.10:0,39,597	0/0:28,0:28:84.25:0,84,1346	1/1:3,15:18:45.15:1013,45,0	1/1:2,5:7:15.05:338,15,0	1/1:0,15:14:42.10:903,42,0	0/0:11,0:11:33.09:0,33,517	0/0:22,0:22:63.22:0,63,1044	0/0:23,0:23:69.22:0,69,1114	0/0:12,0:12:33.11:0,33,544
chr10	76125106	.	TA	T	2399.62	PASS	AB=0.756;AC=14;AF=0.250;AN=56;BaseQRankSum=11.794;DP=620;FS=7.758;HRun=10;HaplotypeScore=74.9588;InbreedingCoeff=0.8357;MQ=64.45;MQ0=1;MQRankSum=-0.475;QD=16.78;ReadPosRankSum=2.542;VQSLOD=4.2065;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:78.02:0,78,993	0/0:10,0:10:24.06:0,24,265	0/1:10,3:13:2.64:3,0,171	0/0:23,0:17:33.03:0,33,345	0/0:19,1:21:21.89:0,22,444	0/0:21,1:22:25.07:0,25,497	0/0:27,1:28:49.14:0,49,761	0/0:23,1:24:34.10:0,34,598	1/1:0,12:12:32.95:279,33,0	0/0:16,0:16:39.11:0,39,431	0/0:15,0:15:45.12:0,45,498	1/1:0,16:16:44.92:382,45,0	1/1:3,19:20:44.98:391,45,0	0/0:19,0:20:38.92:0,39,404	0/0:27,0:27:45.56:0,46,638	0/0:17,0:17:45.09:0,45,485	0/0:31,2:33:55.16:0,55,837	0/0:27,1:28:47.68:0,48,730	0/0:19,0:19:54.11:0,54,585	0/0:30,0:30:84.16:0,84,899	0/0:38,1:39:71.08:0,71,996	1/1:1,19:20:47.98:416,48,0	1/1:1,20:21:53.20:456,53,0	1/1:3,29:32:71.98:625,72,0	0/0:17,0:17:45.12:0,45,498	0/0:22,2:24:14.14:0,14,601	0/0:27,0:27:72.14:0,72,774	0/1:4,2:7:38.01:38,0,104
chr10	76125650	.	TG	T	922.09	PASS	AB=0.903;AC=8;AF=0.143;AN=56;BaseQRankSum=3.279;DP=529;FS=2.458;HRun=10;HaplotypeScore=65.3867;InbreedingCoeff=0.3522;MQ=71.66;MQ0=0;MQRankSum=-4.573;QD=7.38;ReadPosRankSum=0.513;VQSLOD=1.7426;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,32:36:47.79:644,48,0	0/0:4,1:5:6.02:0,6,67	0/0:21,0:19:39.98:0,40,422	0/1:17,1:18:6.36:6,0,194	0/0:12,0:12:24.06:0,24,265	0/0:22,2:24:33.94:0,34,583	0/0:18,0:32:67.19:0,67,472	1/1:2,17:19:41.94:364,42,0	0/0:5,0:13:8.72:0,9,63	0/1:18,3:22:34.17:34,0,356	0/1:9,1:10:2.01:2,0,199	0/0:7,0:15:5.75:0,6,29	0/0:3,0:13:8.99:0,9,44	0/0:14,0:14:42.11:0,42,463	0/0:26,2:28:20.08:0,20,677	0/0:21,0:21:54.15:0,54,597	0/0:33,0:33:78.16:0,78,840	0/0:21,2:23:11.06:0,11,577	0/0:15,0:17:41.45:0,41,444	0/0:11,0:11:1.02:0,1,239	0/0:31,3:34:26.05:0,26,708	0/0:9,0:14:9.06:0,9,44	0/0:2,0:6:8.56:0,9,43	0/0:5,0:13:14.31:0,14,72	0/0:19,0:19:54.13:0,54,582	0/1:17,2:19:6.99:7,0,386	0/0:26,1:27:34.40:0,34,570	0/0:7,0:7:9.01:0,9,91
chr10	76126146	.	TA	T	559.72	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.507;DP=506;FS=6.056;HRun=1;HaplotypeScore=58.3847;InbreedingCoeff=0.9771;MQ=66.83;MQ0=9;MQRankSum=-6.570;QD=9.03;ReadPosRankSum=-2.858;VQSLOD=0.0010;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:72.24:0,72,1000	0/0:8,0:8:24.05:0,24,300	0/0:10,0:9:21.02:0,21,237	0/0:9,0:7:11.53:0,12,145	0/0:22,0:21:63.06:0,63,832	0/0:20,0:20:57.19:0,57,794	0/0:21,0:20:54.13:0,54,702	0/0:31,0:31:93.24:0,93,1205	1/1:14,1:15:22.79:119,23,0	0/0:29,0:28:84.25:0,84,1111	0/0:21,0:21:57.15:0,57,738	1/1:8,2:10:25.36:196,25,0	1/1:6,2:8:16.53:110,17,0	0/0:17,0:17:51.15:0,51,693	0/0:9,0:9:27.09:0,27,377	0/0:16,0:16:44.90:0,45,610	0/0:38,0:37:99:0,102,1328	0/0:32,0:30:65.73:0,66,1070	0/0:24,0:24:72.23:0,72,986	0/0:22,0:21:62.14:0,62,777	0/0:16,0:16:48.09:0,48,581	1/1:6,3:9:15.79:91,16,0	1/1:11,1:12:11.75:89,12,0	1/1:6,2:8:17.75:138,18,0	0/0:16,0:16:29.99:0,30,501	0/0:16,0:16:48.15:0,48,649	0/0:21,0:21:63.16:0,63,822	0/0:16,0:16:48.07:0,48,587
chr10	76127016	.	CA	C	1073.19	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.868;DP=720;FS=16.085;HRun=2;HaplotypeScore=68.9566;InbreedingCoeff=0.9971;MQ=81.12;MQ0=0;MQRankSum=-4.265;QD=33.54;ReadPosRankSum=0.714;VQSLOD=2.0441;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:90.29:1168,90,0	0/0:12,0:12:36.07:0,36,496	0/0:16,0:16:39.12:0,39,545	0/0:20,0:20:57.11:0,57,750	0/0:19,0:19:57.18:0,57,832	0/0:18,0:18:54.17:0,54,790	0/0:32,0:32:96.33:0,96,1439	0/0:43,0:43:99:0,120,1760	0/0:36,0:36:99:0,108,1601	0/0:15,0:15:45.15:0,45,673	0/0:11,0:11:33.10:0,33,475	0/0:28,0:28:84.28:0,84,1259	0/0:35,0:35:99:0,105,1544	0/0:47,0:47:99:0,138,2048	0/0:43,0:43:99:0,129,1930	0/0:38,0:38:99:0,114,1686	0/0:33,0:33:99:0,99,1459	0/0:32,0:32:96.32:0,96,1435	0/0:14,0:14:36.12:0,36,540	0/0:11,0:11:33.11:0,33,495	0/0:54,0:54:99:0,156,2278	0/0:9,0:9:27.09:0,27,405	0/0:16,0:16:45.15:0,45,674	0/0:39,1:40:81.45:0,81,1715	0/0:19,0:19:54.16:0,54,786	0/0:15,0:15:45.13:0,45,637	0/0:22,0:21:66.22:0,66,986	0/0:10,0:10:27.07:0,27,378
chr10	76127532	.	T	TG	8030.84	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-12.919;DP=751;FS=0.000;HRun=3;HaplotypeScore=68.9418;InbreedingCoeff=0.9999;MQ=86.60;MQ0=0;MQRankSum=-3.145;QD=38.43;ReadPosRankSum=3.529;VQSLOD=4.9498;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,31:37:99:1466,105,0	0/0:15,0:15:42.13:0,42,504	0/0:22,0:22:66.17:0,66,771	0/0:27,0:27:52.01:0,52,834	0/0:29,0:29:87.25:0,87,1033	0/0:20,0:19:54.16:0,54,648	0/0:22,0:22:60.18:0,60,720	0/0:31,0:31:87.26:0,87,1034	1/1:1,21:22:66.21:908,66,0	0/0:21,0:21:60.17:0,60,709	0/0:23,0:23:66.20:0,66,791	1/1:0,28:28:75.25:1050,75,0	1/1:5,30:35:90.29:1244,90,0	0/0:39,0:39:99:0,108,1291	0/0:39,0:39:99:0,114,1344	0/0:31,1:32:45.25:0,45,966	0/0:23,0:23:69.21:0,69,827	0/0:23,0:23:69.21:0,69,827	0/0:23,0:23:57.13:0,57,667	0/0:27,0:27:75.23:0,75,896	0/0:36,0:36:99:0,105,1244	1/1:0,24:24:69.23:965,69,0	1/1:0,36:36:99:1377,99,0	1/1:6,21:27:78.18:1020,78,0	0/0:22,0:22:60.18:0,60,720	0/0:32,0:32:93.29:0,93,1116	0/0:23,0:23:63.19:0,63,755	0/0:13,0:13:33.10:0,33,395
chr10	76127627	.	A	AG	8503.90	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-13.996;DP=725;FS=3.530;HRun=1;HaplotypeScore=68.2780;InbreedingCoeff=0.9973;MQ=92.27;MQ0=0;MQRankSum=-1.933;QD=40.69;ReadPosRankSum=2.635;VQSLOD=5.5679;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,52:57:99:2157,144,0	0/0:13,0:13:39.13:0,39,506	0/0:31,0:31:87.27:0,87,1117	0/0:30,0:30:87.13:0,87,1041	0/0:12,0:12:36.12:0,36,467	0/0:25,0:25:66.21:0,66,857	0/0:32,0:32:90.27:0,90,1141	0/0:23,0:22:60.19:0,60,779	1/1:0,24:24:69.23:1034,69,0	0/0:33,0:33:99:0,99,1262	0/0:13,0:13:36.12:0,36,467	1/1:3,24:27:75.25:1124,75,0	1/1:3,27:30:90.27:1306,90,0	0/0:36,0:36:99:0,105,1337	0/0:28,0:28:84.26:0,84,1078	0/0:25,0:25:75.23:0,75,960	0/0:21,0:21:63.20:0,63,818	0/0:27,0:27:78.25:0,78,1012	0/0:22,0:22:66.21:0,66,857	0/0:23,0:23:69.22:0,69,896	0/0:52,0:52:99:0,150,1947	1/1:2,19:21:57.18:834,57,0	1/1:3,19:22:60.19:879,60,0	1/1:0,28:28:78.26:1169,78,0	0/0:20,0:20:57.15:0,57,711	0/0:28,0:28:84.26:0,84,1079	0/0:15,0:15:36.10:0,36,453	0/0:7,0:7:15.52:0,16,195
chr10	76129286	.	T	TTG	571.67	PASS	AB=0.871;AC=8;AF=0.143;AN=56;BaseQRankSum=7.721;DP=665;FS=1.503;HRun=0;HaplotypeScore=114.7632;InbreedingCoeff=0.2520;MQ=70.87;MQ0=11;MQRankSum=-1.055;QD=4.23;ReadPosRankSum=-2.505;VQSLOD=2.2087;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:41:27.13:32,0,27	0/0:8,0:8:24.08:0,24,298	0/0:33,0:22:21.02:0,21,236	0/0:33,0:20:0.84:0,1,276	0/0:29,0:29:74.55:0,75,855	0/0:26,0:24:57.16:0,57,682	0/0:23,0:23:51.11:0,51,600	0/0:34,0:32:63.08:0,63,728	1/1:10,1:11:10.60:85,11,0	0/0:27,0:26:44.25:0,44,570	0/0:21,0:21:42.13:0,42,512	0/1:10,8:19:23.73:141,0,24	0/1:11,0:11:1.15:136,0,1	0/0:16,0:16:39.11:0,39,471	0/0:25,0:25:54.17:0,54,673	0/0:25,0:25:66.21:0,66,814	0/0:22,0:22:51.13:0,51,615	0/0:31,0:30:75.17:0,75,886	0/0:30,0:28:44.91:0,45,506	0/0:28,0:28:63.15:0,63,748	0/0:25,0:26:63.54:0,64,756	0/1:9,1:15:31.54:56,0,32	0/1:13,0:13:26.95:27,0,32	0/1:20,5:25:2.52:234,0,3	0/0:21,0:21:45.13:0,45,548	0/0:23,0:23:56.96:0,57,667	0/0:35,0:35:98.89:0,99,1168	0/0:13,0:13:27.03:0,27,291
chr10	76129290	.	GTGTGTGTGTA	G	1078.36	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=7.161;DP=665;FS=0.000;HRun=0;HaplotypeScore=201.0887;InbreedingCoeff=0.2106;MQ=65.79;MQ0=12;MQRankSum=0.119;QD=7.76;ReadPosRankSum=0.012;VQSLOD=2.4402;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,5:40:71.95:983,72,0	0/0:9,0:9:27.02:0,27,710	0/0:29,0:18:14.16:0,14,282	0/1:30,0:16:4.80:5,0,349	0/0:31,0:31:75.11:0,75,2412	0/0:25,0:23:60.09:0,60,2114	0/0:30,0:30:69:0,69,1960	0/0:30,0:28:72.12:0,72,1583	0/1:11,0:11:77.58:78,0,319	0/0:27,0:26:60.17:0,60,2041	0/0:20,0:20:44.45:0,44,1388	0/0:19,0:19:8.15:0,8,1060	0/0:10,0:10:24.08:0,24,916	0/0:14,0:14:41.97:0,42,738	0/0:25,0:25:63.16:0,63,2673	0/0:26,0:26:66.12:0,66,2121	0/0:23,0:23:54.11:0,54,2309	0/0:35,0:34:87.23:0,87,3316	0/0:30,0:26:45.04:0,45,1411	0/0:27,0:27:66.17:0,66,2591	0/0:27,0:27:75.12:0,75,2513	0/1:14,0:14:2.90:3,0,629	0/1:15,0:15:42.80:43,0,683	0/1:29,0:29:94.72:95,0,1432	0/0:20,0:20:51.07:0,51,2163	0/0:21,0:21:56.83:0,57,1815	0/0:36,0:36:99:0,108,3621	0/0:12,0:12:27:0,27,682
chr10	76129300	.	ATG	A	46.56	PASS	AB=0.951;AC=6;AF=0.111;AN=54;BaseQRankSum=5.245;DP=660;FS=0.771;HRun=0;HaplotypeScore=107.2531;InbreedingCoeff=0.1086;MQ=55.12;MQ0=15;MQRankSum=0.169;QD=0.31;ReadPosRankSum=1.000;VQSLOD=1.5282;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:45,0:45:11.65:54,12,0	0/0:11,0:11:11.15:0,11,189	0/0:23,0:9:2.98:0,3,21	./.	0/1:31,0:31:28.34:28,0,456	0/0:26,0:25:31.03:0,31,625	0/0:30,1:31:5.61:0,6,502	0/0:36,0:33:40.70:0,41,491	0/0:13,0:13:4.75:0,5,126	0/0:21,0:20:28.86:0,29,313	0/1:16,1:17:15.32:15,0,231	0/0:20,0:20:24.51:0,25,274	0/0:11,0:11:21.74:0,22,211	0/0:16,0:16:18.02:0,18,207	0/0:22,1:23:20.24:0,20,721	0/0:27,1:28:11.27:0,11,574	0/0:21,0:21:45.15:0,45,680	0/0:32,1:33:0.57:0,1,876	0/0:24,0:18:34.98:0,35,463	0/0:25,1:26:14.22:0,14,633	0/0:30,0:30:44.77:0,45,616	0/0:15,0:14:15.03:0,15,183	0/0:17,0:17:12:0,12,134	0/0:29,0:29:33.42:0,33,353	0/1:18,2:20:21.96:22,0,479	0/0:19,0:19:3.85:0,4,343	0/1:35,2:37:50.06:50,0,680	0/0:11,0:11:9.03:0,9,132
chr10	76129344	.	CA	C	830.36	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.410;DP=568;FS=2.100;HRun=9;HaplotypeScore=82.7223;InbreedingCoeff=0.8226;MQ=70.20;MQ0=0;MQRankSum=-0.990;QD=20.76;ReadPosRankSum=1.433;VQSLOD=4.3965;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,36:40:99:925,102,0	0/0:7,0:7:15.04:0,15,173	0/0:21,0:15:29.89:0,30,298	0/0:27,0:19:25.36:0,25,425	0/0:20,1:21:20.89:0,21,492	0/0:20,0:20:51.15:0,51,588	0/0:27,1:28:41.69:0,42,701	0/0:26,0:26:63.16:0,63,701	0/0:13,0:13:36.02:0,36,377	0/0:17,0:17:48.14:0,48,554	0/0:10,0:10:24.07:0,24,277	0/0:21,0:21:51.09:0,51,550	0/0:12,0:12:24.48:0,24,262	0/0:14,0:14:39.12:0,39,450	0/0:23,0:23:56.99:0,57,627	0/0:21,0:21:45.11:0,45,502	0/0:22,0:22:48.06:0,48,528	0/0:30,0:30:72.20:0,72,823	0/0:18,0:19:47.97:0,48,534	0/0:21,0:21:42.11:0,42,474	0/0:23,1:24:26.69:0,27,551	0/0:15,0:14:30.04:0,30,321	0/0:12,1:13:2.63:0,3,284	0/0:27,0:27:64.10:0,64,708	0/0:17,0:17:42.12:0,42,477	0/0:19,0:19:51.15:0,51,589	0/0:30,0:30:63.99:0,64,685	0/0:9,0:9:27.08:0,27,312
chr10	76129771	.	G	GT	1255.41	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-9.228;DP=653;FS=13.375;HRun=8;HaplotypeScore=65.4627;InbreedingCoeff=0.9976;MQ=76.15;MQ0=1;MQRankSum=-1.626;QD=27.90;ReadPosRankSum=1.774;VQSLOD=3.1868;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,44:45:99:1350,117,0	0/0:11,0:11:30.01:0,30,274	0/0:16,0:14:32.97:0,33,294	0/0:17,0:17:27.32:0,27,233	0/0:23,0:23:63.03:0,63,576	0/0:18,0:18:45.02:0,45,412	0/0:31,0:31:69:0,69,631	0/0:30,0:30:74.85:0,75,659	0/0:19,0:19:51.02:0,51,466	0/0:32,1:33:52.42:0,52,734	0/0:13,0:13:39.01:0,39,353	0/0:18,0:18:45:0,45,407	0/0:24,0:24:63.01:0,63,572	0/0:21,0:21:54.02:0,54,494	0/0:22,0:22:63.03:0,63,577	0/0:15,0:15:39.02:0,39,357	0/0:32,0:32:93:0,93,843	0/0:24,0:24:68.97:0,69,617	0/0:24,0:24:62.97:0,63,560	0/0:22,0:22:57.03:0,57,521	0/0:45,0:45:99:0,108,984	0/0:19,0:19:48.02:0,48,439	0/0:14,0:14:33.02:0,33,302	0/0:31,0:30:81.04:0,81,741	0/0:22,0:22:63:0,63,565	0/0:23,0:23:66.03:0,66,602	0/0:30,0:30:81:0,81,732	0/0:11,0:11:33.02:0,33,302
chr10	76131682	.	AG	A	2622.76	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.177;DP=486;FS=0.000;HRun=5;HaplotypeScore=60.5456;InbreedingCoeff=0.9980;MQ=80.06;MQ0=0;MQRankSum=-1.344;QD=24.06;ReadPosRankSum=2.892;VQSLOD=2.5389;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:19:39.08:416,39,0	0/0:9,0:9:23.62:0,24,327	0/0:14,0:14:29.48:0,29,246	0/0:23,0:22:46.17:0,46,468	0/0:34,0:34:99:0,99,1317	0/0:22,0:22:63.15:0,63,837	0/0:12,0:12:36.10:0,36,475	0/0:21,0:21:51.15:0,51,652	1/1:1,16:17:42.11:459,42,0	0/0:15,0:15:45.15:0,45,604	0/0:23,0:23:66.19:0,66,865	1/1:3,12:15:38.54:407,39,0	1/1:1,17:18:45.12:487,45,0	0/0:17,0:17:48.15:0,48,639	0/0:16,0:16:48.13:0,48,610	0/0:19,0:19:57.18:0,57,764	0/0:18,0:18:54.10:0,54,666	0/0:19,0:19:54.12:0,54,701	0/0:23,0:23:63.02:0,63,804	0/0:16,0:16:45.15:0,45,608	0/0:8,0:8:24.08:0,24,328	1/1:1,8:9:21.01:215,21,0	1/1:3,15:18:51.11:544,51,0	1/1:0,12:12:27.07:293,27,0	0/0:12,0:12:36.09:0,36,447	0/0:16,0:16:48.14:0,48,613	0/0:27,0:27:81.22:0,81,1042	0/0:13,0:13:30.10:0,30,405
chr10	76133057	.	T	TA	1536.58	PASS	AB=0.807;AC=17;AF=0.304;AN=56;BaseQRankSum=-5.125;DP=574;FS=2.046;HRun=13;HaplotypeScore=71.9693;InbreedingCoeff=0.1934;MQ=81.50;MQ0=0;MQRankSum=1.013;QD=6.83;ReadPosRankSum=0.217;VQSLOD=2.5940;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,15:23:8.75:288,0,9	0/1:5,1:6:15.94:16,0,50	0/1:26,0:22:26.07:26,0,71	0/1:21,0:19:5.31:5,0,52	0/0:20,1:24:23.69:0,24,287	0/0:24,1:27:19.78:0,20,256	0/0:16,1:18:13.92:0,14,214	0/0:28,2:30:41.07:0,41,404	1/1:5,8:14:2.59:192,3,0	0/0:27,0:29:54.45:0,54,355	0/0:20,3:23:21.68:0,22,285	1/1:1,8:9:24.02:218,24,0	1/1:1,14:16:26.82:229,27,0	0/0:19,0:22:45.55:0,46,296	0/0:17,1:19:9.81:0,10,202	0/0:19,0:20:41.50:0,41,286	0/0:24,1:28:32.70:0,33,349	0/1:14,2:17:24.57:25,0,125	0/0:17,1:19:21.47:0,21,274	0/0:21,0:23:4.14:0,4,144	0/0:13,1:17:2:0,2,134	0/1:10,14:24:3.92:236,0,4	1/1:6,12:18:3.73:172,4,0	0/1:6,10:16:8.12:218,0,8	0/1:13,3:17:37.87:38,0,183	0/1:13,4:17:41.90:42,0,183	0/0:28,0:33:38.72:0,39,327	0/0:17,0:17:32.70:0,33,226
chr10	76138019	.	ATT	A	3012.77	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.310;DP=693;FS=1.317;HRun=10;HaplotypeScore=89.9522;InbreedingCoeff=0.9979;MQ=71.12;MQ0=2;MQRankSum=-0.744;QD=26.20;ReadPosRankSum=3.361;VQSLOD=3.8421;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:35:69.87:0,70,240	0/0:8,0:8:24.08:0,24,376	0/0:37,0:23:20.24:0,20,567	0/0:37,0:26:23.26:0,23,312	0/0:36,0:37:98.82:0,99,1513	0/0:15,0:15:42.14:0,42,667	0/0:21,0:22:62.69:0,63,936	0/0:31,0:31:68.26:0,68,1040	1/1:1,22:23:63.17:702,63,0	0/0:27,0:27:75.25:0,75,1169	0/0:21,0:21:54.18:0,54,857	1/1:3,15:18:45.10:502,45,0	1/1:0,20:20:60.16:669,60,0	0/0:26,0:26:69.23:0,69,1069	0/0:21,0:21:63.19:0,63,975	0/0:25,0:25:60.20:0,60,948	0/0:24,0:24:67.73:0,68,997	0/0:29,0:29:75.26:0,75,1183	0/0:28,0:29:77.73:0,78,1149	0/0:28,0:28:72.23:0,72,1097	0/0:23,0:23:63.18:0,63,934	1/1:1,16:17:42.10:468,42,0	1/1:3,12:15:30.06:334,30,0	1/1:1,19:21:50.61:525,51,0	0/0:18,0:19:53.65:0,54,779	0/0:35,0:35:87.26:0,87,1311	0/0:34,0:34:96.32:0,96,1483	0/0:12,0:12:36.05:0,36,514
chr10	76139427	.	CTTT	C	1943.27	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=5.698;DP=404;FS=3.257;HRun=14;HaplotypeScore=111.7008;InbreedingCoeff=0.9740;MQ=67.57;MQ0=1;MQRankSum=-5.818;QD=21.12;ReadPosRankSum=5.429;VQSLOD=2.8133;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,16:21:48.01:544,48,0	0/0:5,0:5:12.03:0,12,179	0/0:17,0:12:20.99:0,21,246	0/0:18,0:15:29.78:0,30,317	0/0:20,0:23:48.99:0,49,787	0/0:13,0:18:39.09:0,39,614	0/0:8,0:10:28.32:0,28,453	0/0:19,0:20:36.10:0,36,609	1/1:1,10:11:30.07:351,30,0	0/0:16,0:18:42.10:0,42,655	0/0:8,0:9:18.06:0,18,311	1/1:6,13:19:39.03:456,39,0	1/1:5,7:12:17.99:210,18,0	0/0:13,0:16:30.04:0,30,444	0/0:15,0:17:45.13:0,45,758	0/0:13,0:13:21.05:0,21,333	0/0:20,0:21:48.12:0,48,772	0/0:7,0:10:16.28:0,16,236	0/0:19,0:19:39.07:0,39,607	0/0:11,0:11:27.09:0,27,465	0/0:11,0:11:25.61:0,26,367	1/1:4,8:12:21.03:245,21,0	1/1:2,5:7:14.99:175,15,0	1/1:3,6:10:14.96:158,15,0	0/0:6,0:6:12.04:0,12,220	0/0:18,0:23:51.10:0,51,787	0/0:11,0:14:27.05:0,27,426	0/0:10,0:12:22.32:0,22,369
chr10	76144529	.	AGTGTGTGT	A	2550.72	PASS	AB=0.858;AC=13;AF=0.241;AN=54;BaseQRankSum=6.018;DP=535;FS=2.209;HRun=0;HaplotypeScore=137.6114;InbreedingCoeff=0.7199;MQ=57.45;MQ0=12;MQRankSum=-8.518;QD=15.00;ReadPosRankSum=-0.549;VQSLOD=2.6705;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:27:28.75:44,0,29	0/0:7,0:7:15.05:0,15,506	./.	0/1:36,0:17:0:0,0,0	0/0:17,0:16:30.10:0,30,1062	0/0:17,0:16:33.11:0,33,1131	0/0:14,0:16:30.10:0,30,975	0/0:20,0:20:16.61:0,17,462	1/1:7,8:15:21.07:509,21,0	0/0:12,0:20:35.99:0,36,333	0/0:11,0:16:9:0,9,80	0/1:10,3:15:35.96:320,0,36	1/1:5,9:15:33.11:791,33,0	0/0:8,0:8:15.05:0,15,606	0/0:17,0:17:27.56:0,28,968	0/0:10,0:13:15.03:0,15,422	0/0:22,0:23:36.12:0,36,1290	0/0:22,0:22:30.10:0,30,880	0/0:19,0:19:22.89:0,23,714	0/0:18,0:20:33.58:0,34,1147	0/0:21,0:21:21.05:0,21,640	1/1:12,8:20:15.05:374,15,0	1/1:10,8:19:21.07:482,21,0	1/1:16,5:21:8.69:204,9,0	0/0:17,0:18:27.09:0,27,945	0/0:19,0:19:33.11:0,33,1208	0/0:16,0:24:48.16:0,48,1588	0/0:9,0:10:14.26:0,14,385
chr10	76146370	.	G	GAGATAAAT	15851.52	PASS	AB=0.798;AC=54;AF=0.964;AN=56;BaseQRankSum=0.627;DP=297;FS=6.061;HRun=0;HaplotypeScore=150.8166;InbreedingCoeff=-0.0584;MQ=41.62;MQ0=0;MQRankSum=-3.720;QD=53.37;ReadPosRankSum=1.272;VQSLOD=4.4741;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:6.02:168,6,0	1/1:8,0:8:18.06:512,18,0	0/1:4,0:5:16.76:191,0,17	0/1:9,1:10:99:232,0,162	1/1:16,0:16:18.06:546,18,0	1/1:8,0:8:21.07:475,21,0	1/1:13,0:13:33.11:772,33,0	1/1:10,0:10:30.10:877,30,0	1/1:9,0:9:18.02:394,18,0	1/1:18,0:18:45.58:1264,46,0	1/1:13,0:13:7.32:703,7,0	1/1:12,0:12:11.70:549,12,0	1/1:9,0:9:12.02:212,12,0	1/1:8,0:8:24.08:693,24,0	1/1:17,0:17:30.09:960,30,0	1/1:15,0:15:27.09:758,27,0	1/1:8,0:8:9.03:218,9,0	1/1:8,0:8:18.06:471,18,0	1/1:4,0:4:9.03:277,9,0	1/1:11,0:11:24.08:820,24,0	1/1:8,0:8:12.04:376,12,0	1/1:11,0:11:11.14:553,11,0	1/1:11,0:11:27.09:828,27,0	1/1:7,0:7:7.27:168,7,0	1/1:12,0:12:21.07:528,21,0	1/1:16,0:16:42.11:1055,42,0	1/1:11,0:11:33.11:899,33,0	1/1:6,0:6:15.05:352,15,0
chr10	76146718	.	C	CT	3050.48	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.094;DP=545;FS=5.375;HRun=7;HaplotypeScore=69.2740;InbreedingCoeff=0.9193;MQ=67.78;MQ0=3;MQRankSum=-1.214;QD=20.07;ReadPosRankSum=1.811;VQSLOD=3.3275;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,34:41:77.95:990,78,0	0/0:10,0:10:30.01:0,30,280	0/0:21,0:12:2.11:0,2,47	0/0:19,0:13:17.31:0,17,135	0/0:12,0:12:36.06:0,36,345	0/0:29,0:29:78.12:0,78,753	0/0:22,0:22:51.08:0,51,492	0/0:30,0:30:54.31:0,54,501	1/1:3,7:10:3.08:148,3,0	0/0:18,0:18:48.05:0,48,459	0/0:13,0:13:33.04:0,33,313	1/1:7,16:23:16.63:464,17,0	1/1:4,15:19:18.15:338,18,0	0/0:21,0:21:57.08:0,57,545	0/0:23,0:23:57.08:0,57,550	0/0:19,0:19:57.05:0,57,533	0/0:30,0:30:78.09:0,78,745	0/0:21,0:21:54.08:0,54,521	0/0:8,0:8:21.03:0,21,202	0/0:14,0:14:33.05:0,33,318	0/0:12,0:12:36.06:0,36,348	1/1:5,10:15:17.87:180,18,0	1/1:4,13:18:47.92:519,48,0	1/1:5,20:26:42.06:601,42,0	0/0:19,0:19:48.05:0,48,456	0/0:20,0:20:45.06:0,45,434	0/0:27,0:26:75.11:0,75,723	0/0:5,0:5:12.02:0,12,116
chr10	76149053	.	GT	G	5285.08	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.328;DP=521;FS=2.728;HRun=2;HaplotypeScore=52.9480;InbreedingCoeff=0.9911;MQ=86.15;MQ0=1;MQRankSum=-4.211;QD=37.75;ReadPosRankSum=3.027;VQSLOD=5.4605;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:75.25:1049,75,0	0/0:9,0:9:27.09:0,27,420	0/0:17,0:17:45.14:0,45,679	0/0:17,0:17:49.36:0,49,703	0/0:8,0:8:24.07:0,24,361	0/0:14,0:14:42.14:0,42,671	0/0:47,0:47:99:0,141,2254	0/0:12,0:12:36.12:0,36,574	1/1:0,17:17:45.15:629,45,0	0/0:8,0:8:21.05:0,21,311	0/0:9,0:9:27.08:0,27,409	1/1:0,26:26:72.24:1007,72,0	1/1:0,23:23:57.19:797,57,0	0/0:16,0:16:48.16:0,48,764	0/0:18,0:18:54.18:0,54,861	0/0:18,0:18:54.18:0,54,863	0/0:34,0:34:99:0,102,1625	0/0:28,0:28:84.29:0,84,1343	0/0:18,0:18:51.16:0,51,771	0/0:10,0:10:21.07:0,21,336	0/0:44,0:44:99:0,132,2084	1/1:0,9:9:27.09:377,27,0	1/1:0,9:9:20.51:293,21,0	1/1:0,28:28:81.27:1133,81,0	0/0:16,0:16:42.12:0,42,647	0/0:19,0:18:54.16:0,54,818	0/0:15,0:15:45.15:0,45,717	0/0:4,0:4:12.04:0,12,192
chr10	76149279	.	CT	C	4495.91	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.437;DP=558;FS=3.993;HRun=2;HaplotypeScore=55.0888;InbreedingCoeff=0.9997;MQ=87.42;MQ0=0;MQRankSum=-1.961;QD=34.85;ReadPosRankSum=4.759;VQSLOD=5.1095;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:96.14:1220,96,0	0/0:15,0:15:45.12:0,45,632	0/0:21,0:21:60.20:0,60,894	0/0:21,0:21:53.97:0,54,753	0/0:17,0:17:51.15:0,51,725	0/0:28,0:28:84.21:0,84,1154	0/0:29,0:29:87.25:0,87,1242	0/0:30,0:30:87.27:0,87,1249	1/1:2,14:16:48.13:590,48,0	0/0:22,0:22:57.17:0,57,788	0/0:16,0:16:48.15:0,48,699	1/1:1,18:19:48.16:623,48,0	1/1:0,14:14:39.13:506,39,0	0/0:15,0:15:45.13:0,45,635	0/0:11,0:11:30.10:0,30,449	0/0:19,0:19:57.17:0,57,816	0/0:27,0:27:81.26:0,81,1187	0/0:28,0:27:84.28:0,84,1251	0/0:22,0:22:66.21:0,66,955	0/0:10,0:10:30.10:0,30,449	0/0:25,0:25:72.22:0,72,1037	1/1:0,14:14:38.80:506,39,0	1/1:0,15:15:42.13:545,42,0	1/1:0,15:15:39.13:506,39,0	0/0:23,0:23:66.21:0,66,969	0/0:24,0:24:72.24:0,72,1059	0/0:15,0:15:45.12:0,45,633	0/0:11,0:11:33.11:0,33,494
chr10	76149752	.	GAA	G	3875.63	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=17.668;DP=623;FS=10.227;HRun=2;HaplotypeScore=119.1460;InbreedingCoeff=0.9806;MQ=93.34;MQ0=0;MQRankSum=-8.070;QD=26.36;ReadPosRankSum=2.606;VQSLOD=2.0096;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:34:86.97:876,87,0	0/0:8,0:8:24.08:0,24,487	0/0:21,0:22:41.57:0,42,1157	0/0:34,0:34:93.32:0,93,1819	0/0:25,0:25:75.24:0,75,1471	0/0:18,0:18:51.17:0,51,1023	0/0:33,0:33:99:0,99,1941	0/0:27,0:27:81.28:0,81,1608	1/1:1,19:20:56.78:562,57,0	0/0:22,0:22:66.23:0,66,1334	0/0:12,0:12:36.12:0,36,732	1/1:1,20:21:60.07:632,60,0	1/1:1,16:17:50.04:469,50,0	0/0:24,0:24:72.25:0,72,1454	0/0:20,0:20:60.21:0,60,1219	0/0:28,0:28:84.29:0,84,1698	0/0:38,0:38:99:0,114,2299	0/0:22,0:22:66.20:0,66,1280	0/0:20,0:20:60.20:0,60,1174	0/0:16,0:16:48.15:0,48,912	0/0:37,0:37:99:0,108,2137	1/1:2,14:16:44.21:382,44,0	1/1:1,11:13:28.84:255,29,0	1/1:2,24:26:71.09:700,71,0	0/0:21,0:21:63.21:0,63,1228	0/0:18,0:18:54.17:0,54,1053	0/0:29,0:29:87.30:0,87,1746	0/0:2,0:2:6.02:0,6,122
chr10	76149755	.	TA	T	2683.95	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=17.912;DP=626;FS=10.263;HRun=2;HaplotypeScore=111.1710;InbreedingCoeff=0.9809;MQ=92.70;MQ0=0;MQRankSum=-6.117;QD=18.64;ReadPosRankSum=2.393;VQSLOD=2.8558;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:83.14:617,83,0	0/0:9,0:9:27.09:0,27,417	0/0:22,0:22:61.05:0,61,938	0/0:33,0:33:84.29:0,84,1445	0/0:26,0:26:78.25:0,78,1222	0/0:18,0:18:51.16:0,51,792	0/0:34,0:34:99:0,102,1573	0/0:30,0:29:87.29:0,87,1366	1/1:0,19:19:54.29:399,54,0	0/0:24,0:24:72.24:0,72,1130	0/0:13,0:13:39.13:0,39,620	1/1:0,20:20:56.51:442,57,0	1/1:1,17:18:52.98:373,53,0	0/0:25,0:25:75.26:0,75,1195	0/0:20,0:20:60.20:0,60,959	0/0:28,0:28:84.29:0,84,1341	0/0:38,0:38:99:0,114,1822	0/0:22,0:22:63.21:0,63,1007	0/0:21,0:21:63.21:0,63,984	0/0:16,0:16:48.15:0,48,744	0/0:35,0:35:99:0,99,1581	1/1:2,15:17:46.68:311,47,0	1/1:0,13:13:37.95:235,38,0	1/1:3,24:27:68.04:505,68,0	0/0:21,0:21:63.20:0,63,981	0/0:17,0:17:51.17:0,51,815	0/0:28,0:28:84.29:0,84,1343	0/0:2,0:2:6.02:0,6,96
chr10	76149757	.	GA	G	4491.51	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=17.736;DP=628;FS=10.096;HRun=2;HaplotypeScore=105.9603;InbreedingCoeff=0.9810;MQ=92.57;MQ0=0;MQRankSum=-5.679;QD=30.55;ReadPosRankSum=2.334;VQSLOD=3.5266;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:31:87.22:969,87,0	0/0:10,0:10:30.07:0,30,425	0/0:21,0:21:54.64:0,55,809	0/0:34,0:34:96.32:0,96,1420	0/0:27,0:27:78.25:0,78,1140	0/0:17,0:17:48.16:0,48,719	0/0:32,0:32:96.33:0,96,1438	0/0:30,0:29:84.28:0,84,1258	1/1:19,0:19:56.83:616,57,0	0/0:24,0:24:72.24:0,72,1079	0/0:13,0:13:39.13:0,39,585	1/1:22,0:22:60.15:659,60,0	1/1:17,1:18:53.51:579,54,0	0/0:24,0:24:72.24:0,72,1079	0/0:20,0:20:60.20:0,60,899	0/0:28,0:28:84.28:0,84,1241	0/0:39,0:39:99:0,117,1712	0/0:22,0:22:66.21:0,66,967	0/0:23,0:23:69.20:0,69,993	0/0:16,0:16:48.15:0,48,698	0/0:34,0:34:99:0,99,1464	1/1:14,3:17:45.13:508,45,0	1/1:11,2:13:39.11:445,39,0	1/1:27,0:27:73.38:716,73,0	0/0:19,0:19:57.19:0,57,854	0/0:18,0:18:54.16:0,54,770	0/0:28,0:28:84.28:0,84,1259	0/0:2,0:2:6.02:0,6,90
chr10	76149758	.	A	ATG	6401.34	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=17.839;DP=641;FS=9.909;HRun=0;HaplotypeScore=117.4173;InbreedingCoeff=0.9810;MQ=92.81;MQ0=0;MQRankSum=-8.207;QD=40.77;ReadPosRankSum=2.033;VQSLOD=5.8508;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,28:32:93.28:1416,93,0	0/0:10,0:10:30.07:0,30,461	0/0:22,0:22:47.44:0,47,852	0/0:35,0:35:96.32:0,96,1504	0/0:27,0:27:78.25:0,78,1237	0/0:17,0:17:48.16:0,48,781	0/0:33,0:33:96.33:0,96,1559	0/0:28,0:27:84.29:0,84,1353	1/1:2,19:21:57.18:872,57,0	0/0:24,0:24:72.25:0,72,1175	0/0:13,0:13:39.13:0,39,636	1/1:2,20:22:60.18:954,60,0	1/1:2,16:18:54.12:800,54,0	0/0:24,0:24:72.25:0,72,1170	0/0:20,0:20:60.20:0,60,977	0/0:29,0:29:84.28:0,84,1349	0/0:39,0:39:99:0,117,1855	0/0:22,0:22:66.21:0,66,1046	0/0:23,0:23:69.20:0,69,1069	0/0:16,0:16:48.15:0,48,751	0/0:33,0:33:99:0,99,1588	1/1:4,14:18:45.13:602,45,0	1/1:7,11:18:45.12:533,45,0	1/1:4,24:28:78.25:1224,78,0	0/0:19,0:19:57.19:0,57,928	0/0:19,0:19:54.16:0,54,834	0/0:29,0:29:84.29:0,84,1371	0/0:2,0:2:6.02:0,6,98
chr10	76149900	.	G	GTT	1586.94	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=10.835;DP=525;FS=24.485;HRun=9;HaplotypeScore=104.5183;InbreedingCoeff=0.8618;MQ=79.94;MQ0=3;MQRankSum=-8.292;QD=16.03;ReadPosRankSum=-1.933;VQSLOD=0.0290;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:20,2:21:18.17:459,18,0	0/0:8,0:8:21.02:0,21,213	0/0:19,0:14:1.50:0,1,161	0/0:53,0:32:48.97:0,49,495	0/0:28,0:28:66.08:0,66,693	0/0:14,0:14:39.10:0,39,415	0/0:21,0:21:26.93:0,27,536	0/0:26,0:26:57.39:0,57,571	1/1:15,1:16:26.80:249,27,0	0/0:14,0:14:36.05:0,36,370	0/0:22,0:22:37.13:0,37,468	1/1:7,0:8:16.39:122,16,0	1/1:6,0:6:16.16:117,16,0	0/1:10,0:10:5.02:5,0,170	0/0:19,0:19:36.04:0,36,383	0/0:19,0:19:39.06:0,39,407	0/0:30,0:30:81.17:0,81,859	0/0:25,0:25:68.65:0,69,710	0/0:25,0:25:52.99:0,53,613	0/0:13,0:14:35.82:0,36,363	0/0:22,0:23:44.79:0,45,458	1/1:19,2:22:46.82:521,47,0	1/1:3,0:3:5.99:48,6,0	1/1:7,2:10:22.25:258,22,0	0/0:16,0:16:42.04:0,42,423	0/0:23,0:23:60.11:0,60,629	0/0:22,0:22:42.01:0,42,437	0/0:5,0:5:12.01:0,12,128
chr10	76149907	.	TTTG	T	2665.08	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=12.092;DP=516;FS=18.731;HRun=0;HaplotypeScore=110.8590;InbreedingCoeff=0.9184;MQ=74.36;MQ0=4;MQRankSum=-10.812;QD=24.68;ReadPosRankSum=-1.350;VQSLOD=1.7602;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,11:21:13.68:650,14,0	0/0:8,0:8:23.94:0,24,378	0/1:18,0:13:2.62:3,0,188	0/0:50,0:27:47.40:0,47,673	0/0:27,0:27:72.18:0,72,1304	0/0:13,0:13:39.13:0,39,776	0/0:21,0:21:52.38:0,52,1076	0/0:29,0:28:66.89:0,67,1028	1/1:6,9:15:29.94:437,30,0	0/0:14,0:14:39.09:0,39,733	0/0:20,0:20:40.15:0,40,791	1/1:5,4:9:26.46:294,26,0	1/1:4,3:7:20.99:245,21,0	0/0:9,0:9:24.07:0,24,406	0/0:17,0:17:48.11:0,48,834	0/0:16,0:16:44.73:0,45,784	0/0:31,0:31:93.30:0,93,1786	0/0:25,0:25:75.12:0,75,1313	0/0:27,0:27:65.77:0,66,1080	0/0:15,0:15:45.10:0,45,786	0/0:19,0:19:51.09:0,51,851	1/1:10,11:21:40.37:698,40,0	1/1:1,2:3:8.99:113,9,0	1/1:8,3:11:32.75:420,33,0	0/0:16,0:16:48.10:0,48,755	0/0:24,0:24:69.20:0,69,1220	0/0:22,0:22:48:0,48,862	0/0:5,0:5:12:0,12,179
chr10	76149909	.	TG	T	987.65	PASS	AB=0.941;AC=15;AF=0.268;AN=56;BaseQRankSum=13.275;DP=511;FS=23.255;HRun=1;HaplotypeScore=95.9343;InbreedingCoeff=0.9149;MQ=71.90;MQ0=4;MQRankSum=-10.350;QD=9.41;ReadPosRankSum=-1.845;VQSLOD=-0.3217;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:21:18.62:219,19,0	0/0:8,0:8:23.94:0,24,270	0/1:15,1:11:3.36:3,0,191	0/0:51,1:28:30.19:0,30,489	0/0:24,0:24:72.03:0,72,838	0/0:13,0:13:39.13:0,39,502	0/0:23,0:23:65.79:0,66,772	0/0:29,0:28:16.90:0,17,711	1/1:11,3:14:29.39:185,29,0	0/0:14,0:14:39.07:0,39,479	0/0:19,0:19:40.15:0,40,590	1/1:7,2:9:21.66:148,22,0	1/1:6,1:7:20.80:147,21,0	0/0:8,0:8:24.05:0,24,287	0/0:17,0:17:48.07:0,48,562	0/0:15,0:15:44.47:0,44,525	0/0:31,0:31:93.22:0,93,1148	0/0:25,0:25:75.12:0,75,903	0/0:29,0:29:58.86:0,59,874	0/0:15,0:15:39.88:0,40,494	0/0:18,0:18:45.86:0,46,580	1/1:21,0:21:30.03:241,30,0	1/1:3,0:3:8.85:55,9,0	1/1:10,1:11:31.02:183,31,0	0/0:16,0:16:48.06:0,48,542	0/0:24,0:24:68.86:0,69,832	0/0:20,0:20:48.02:0,48,587	0/0:5,0:5:12.01:0,12,146
chr10	76149913	.	TTG	T	315.89	PASS	AB=0.967;AC=11;AF=0.196;AN=56;BaseQRankSum=11.297;DP=501;FS=16.445;HRun=0;HaplotypeScore=106.4967;InbreedingCoeff=0.6252;MQ=68.70;MQ0=4;MQRankSum=-10.583;QD=3.59;ReadPosRankSum=1.615;VQSLOD=1.5253;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:22:49.15:49,0,125	0/0:7,0:7:21.04:0,21,337	0/0:17,0:9:20.07:0,20,240	0/0:53,0:26:54.46:0,54,706	0/0:20,0:20:60.21:0,60,1087	0/0:13,0:13:39.05:0,39,676	0/0:22,0:22:20.01:0,20,1069	0/0:28,0:27:47.02:0,47,1079	1/1:10,3:13:9.84:78,10,0	0/0:13,0:13:39.13:0,39,695	0/0:18,0:18:45.12:0,45,738	0/1:8,1:9:4.15:77,0,4	1/1:5,0:5:13.21:86,13,0	0/0:9,0:9:24.08:0,24,411	0/0:15,0:15:45.15:0,45,814	0/0:15,0:15:45.13:0,45,774	0/0:32,0:32:96.33:0,96,1718	0/0:24,0:24:69.23:0,69,1238	0/0:31,0:31:80.94:0,81,1426	0/0:16,0:16:48.12:0,48,841	0/0:16,0:16:48.16:0,48,844	0/1:21,0:21:49.42:49,0,76	1/1:3,0:3:6.05:26,6,0	1/1:11,1:12:15.95:112,16,0	0/0:15,0:15:39.13:0,39,675	0/0:24,0:24:69.20:0,69,1159	0/0:21,0:21:51.14:0,51,834	0/0:4,0:4:5.07:0,5,108
chr10	76149921	.	TTTTG	T	2791.47	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=13.239;DP=522;FS=16.607;HRun=0;HaplotypeScore=117.4439;InbreedingCoeff=0.9161;MQ=63.75;MQ0=6;MQRankSum=-11.411;QD=32.09;ReadPosRankSum=0.445;VQSLOD=2.7044;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,10:24:39.55:706,40,0	0/0:6,0:6:18.06:0,18,423	0/0:25,0:10:6.11:0,6,180	0/0:70,0:28:31.09:0,31,496	0/0:20,0:20:57.18:0,57,1329	0/0:13,0:13:39.13:0,39,910	0/0:23,0:23:52.24:0,52,1360	0/0:32,0:31:80.59:0,81,1379	1/1:6,5:11:26.46:375,26,0	0/0:14,0:14:42.13:0,42,951	0/0:15,0:15:36.11:0,36,813	1/1:6,4:9:26.34:342,26,0	1/1:4,2:6:18.05:252,18,0	0/0:8,0:8:21.06:0,21,400	0/0:15,0:15:42.14:0,42,985	0/0:15,0:15:42.11:0,42,913	0/0:37,0:37:99:0,108,2268	0/0:25,0:25:73.32:0,73,1349	0/0:29,0:29:55.46:0,55,1201	0/0:16,0:16:48.14:0,48,1023	0/0:15,0:15:42.06:0,42,926	1/1:4,12:16:44.96:676,45,0	1/1:0,3:3:9.03:165,9,0	1/1:8,4:12:32.54:468,33,0	0/0:14,0:14:42.11:0,42,844	0/0:21,0:21:60.18:0,60,1367	0/0:22,0:22:54.11:0,54,1007	0/1:3,0:3:0.95:1,0,143
chr10	76149924	.	TG	T	758.51	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=12.656;DP=513;FS=17.998;HRun=1;HaplotypeScore=93.4037;InbreedingCoeff=0.8555;MQ=59.54;MQ0=7;MQRankSum=-11.311;QD=9.03;ReadPosRankSum=0.956;VQSLOD=-0.0630;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,1:21:27.17:210,27,0	0/0:6,0:6:18.06:0,18,238	0/0:24,0:7:11.14:0,11,138	0/0:65,2:24:26.18:0,26,309	0/0:19,0:19:57.13:0,57,705	0/0:13,0:13:39.13:0,39,516	0/0:24,0:24:71:0,71,856	0/0:27,5:31:54.55:0,55,962	1/1:8,3:11:25.47:164,25,0	0/0:14,0:14:42.10:0,42,533	0/0:14,0:14:36.12:0,36,464	1/1:7,2:8:23.25:136,23,0	1/1:5,1:6:8.77:82,9,0	0/0:7,0:7:21.03:0,21,235	0/0:14,0:14:42.10:0,42,525	0/0:15,0:15:28.96:0,29,525	0/0:36,0:36:99:0,108,1360	0/0:27,0:27:78.09:0,78,868	0/0:27,0:27:60.40:0,60,891	0/0:16,0:16:48.14:0,48,613	0/0:16,0:16:43.66:0,44,528	0/1:16,0:16:1.75:148,0,2	1/1:4,0:4:8.76:52,9,0	1/1:12,0:12:21.92:149,22,0	0/0:14,0:14:42.14:0,42,550	0/0:21,0:21:63.18:0,63,796	0/0:21,0:21:54:0,54,657	0/1:3,0:3:0.94:1,0,71
chr10	76149925	.	G	GT	1125.49	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.819;DP=520;FS=11.965;HRun=8;HaplotypeScore=93.9616;InbreedingCoeff=0.9405;MQ=59.12;MQ0=9;MQRankSum=-11.748;QD=13.73;ReadPosRankSum=2.051;VQSLOD=2.3187;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,5:20:35.93:324,36,0	0/0:6,0:6:18.01:0,18,165	0/0:25,1:7:5.95:0,6,109	0/0:63,3:24:17.97:0,18,160	0/0:19,0:19:51.01:0,51,461	0/0:13,0:13:36.01:0,36,330	0/0:24,0:24:63.03:0,63,576	0/0:32,0:31:77.85:0,78,710	1/1:11,0:11:17.56:113,18,0	0/0:14,0:14:42.02:0,42,383	0/0:14,0:14:36.01:0,36,324	1/1:9,1:9:22.33:167,22,0	1/1:5,1:6:16.40:126,16,0	0/0:7,0:7:15:0,15,137	0/0:14,0:14:36.02:0,36,330	0/0:15,0:15:41.06:0,41,363	0/0:36,0:36:99:0,102,933	0/0:27,0:27:61.19:0,61,534	0/0:28,1:28:28.46:0,28,513	0/0:17,0:17:42.01:0,42,384	0/0:16,0:16:38.92:0,39,341	1/1:16,1:16:35.90:308,36,0	1/1:4,0:4:8.97:76,9,0	1/1:9,3:12:21.38:204,21,0	0/0:14,0:14:42.02:0,42,384	0/0:21,0:21:60:0,60,538	0/0:20,0:20:51.01:0,51,461	0/0:3,0:3:6:0,6,55
chr10	76149943	.	T	TG	2353.72	PASS	AB=0.644;AC=12;AF=0.214;AN=56;BaseQRankSum=12.226;DP=529;FS=1.005;HRun=0;HaplotypeScore=92.2905;InbreedingCoeff=0.8161;MQ=56.49;MQ0=13;MQRankSum=-11.740;QD=25.58;ReadPosRankSum=0.539;VQSLOD=3.9272;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,19:21:56.78:700,57,0	0/0:9,0:9:24.04:0,24,285	0/0:45,0:15:21.91:0,22,247	0/0:71,0:19:12.67:0,13,183	0/0:15,0:15:45.15:0,45,628	0/0:12,0:12:36.11:0,36,488	0/0:19,0:19:57.13:0,57,727	0/0:31,0:30:85.11:0,85,1074	1/1:5,8:13:29.06:339,29,0	0/0:14,0:14:42.14:0,42,574	0/0:12,0:12:32.95:0,33,396	0/1:3,7:9:0.68:214,0,1	0/1:4,3:6:17.77:109,0,18	0/0:8,0:8:24.02:0,24,282	0/0:11,0:11:33.11:0,33,461	0/0:14,0:14:42.13:0,42,566	0/0:35,0:35:99:0,105,1381	0/0:24,0:24:71.89:0,72,941	0/0:27,0:24:69.14:0,69,843	0/0:16,0:16:42.05:0,42,562	0/0:17,0:17:31.94:0,32,464	1/1:1,15:15:42.11:563,42,0	1/1:3,5:7:18.06:244,18,0	1/1:5,9:14:30.06:366,30,0	0/0:16,0:16:40.97:0,41,579	0/0:19,0:19:57.10:0,57,729	0/0:20,0:20:51.16:0,51,689	0/0:2,0:2:6.02:0,6,84
chr10	76149955	.	GT	G	1382.53	PASS	AB=0.923;AC=15;AF=0.268;AN=56;BaseQRankSum=11.728;DP=519;FS=0.000;HRun=9;HaplotypeScore=91.2597;InbreedingCoeff=0.8670;MQ=56.40;MQ0=18;MQRankSum=-11.477;QD=13.29;ReadPosRankSum=-1.021;VQSLOD=3.3351;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,13:19:26.41:307,26,0	0/0:8,0:8:20.97:0,21,215	0/0:43,1:12:10.37:0,10,123	0/0:65,2:19:4.50:0,5,76	0/0:13,0:13:30.08:0,30,339	0/0:12,0:11:21.05:0,21,234	0/0:14,0:14:39.10:0,39,440	0/0:30,0:30:61.52:0,62,747	1/1:5,10:15:19.83:237,20,0	0/0:14,0:13:33.10:0,33,380	0/1:11,1:12:1.02:1,0,224	1/1:3,6:8:8.72:138,9,0	1/1:4,3:6:12.47:92,12,0	0/0:6,0:6:18.05:0,18,208	0/0:12,0:11:33.09:0,33,372	0/0:12,0:13:35.93:0,36,386	0/0:33,0:33:93.18:0,93,1017	0/0:32,0:32:84.14:0,84,952	0/0:28,0:25:57.83:0,58,616	0/0:15,0:15:36.08:0,36,397	0/0:19,0:19:44.96:0,45,497	1/1:3,13:15:42.02:382,42,0	1/1:2,7:8:21.01:192,21,0	1/1:8,7:15:27.71:224,28,0	0/0:15,0:15:42.12:0,42,485	0/0:19,0:18:54.14:0,54,610	0/0:18,0:18:48.14:0,48,552	0/0:2,0:2:3.01:0,3,35
chr10	76149964	.	TG	T	513.77	PASS	AB=0.992;AC=12;AF=0.214;AN=56;BaseQRankSum=12.711;DP=508;FS=4.572;HRun=1;HaplotypeScore=91.0029;InbreedingCoeff=0.5307;MQ=57.34;MQ0=16;MQRankSum=-11.766;QD=3.25;ReadPosRankSum=-0.187;VQSLOD=-0.0858;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:21:72.49:113,0,72	0/0:8,0:8:3.41:0,3,243	0/0:40,2:14:17.81:0,18,201	0/1:58,2:19:1.34:1,0,79	0/0:11,0:11:33.06:0,33,403	0/0:10,0:9:23.21:0,23,238	0/0:14,0:14:39.04:0,39,452	0/0:31,0:30:52.68:0,53,846	1/1:13,0:13:25.30:105,25,0	0/0:14,0:12:36.08:0,36,406	0/0:9,0:9:4.89:0,5,222	1/1:9,1:9:17.23:79,17,0	1/1:6,1:6:17.12:98,17,0	0/0:8,0:8:23.42:0,23,263	0/0:15,0:14:42.08:0,42,490	0/0:13,0:13:38.93:0,39,428	0/0:30,0:30:87.18:0,87,1054	0/0:33,0:33:78.30:0,78,1101	0/0:23,0:22:48.31:0,48,693	0/0:13,0:13:39.07:0,39,469	0/0:19,0:19:50.91:0,51,583	1/1:14,1:15:25.22:170,25,0	0/1:13,0:12:43.96:62,0,44	0/1:15,0:15:47.42:53,0,47	0/0:14,0:14:42.14:0,42,542	0/0:20,0:19:57.11:0,57,688	0/0:20,0:20:53.83:0,54,612	0/0:3,0:3:2.85:0,3,38
chr10	76149975	.	GT	G	960.10	PASS	AB=0.889;AC=16;AF=0.286;AN=56;BaseQRankSum=8.328;DP=464;FS=2.896;HRun=12;HaplotypeScore=76.2825;InbreedingCoeff=0.6870;MQ=57.70;MQ0=13;MQRankSum=-6.804;QD=5.42;ReadPosRankSum=-0.355;VQSLOD=2.1752;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,15:19:41.75:324,42,0	0/0:7,0:7:18.04:0,18,183	0/0:37,0:13:21.36:0,21,177	0/1:37,0:13:15.88:16,0,47	0/0:11,0:11:21.04:0,21,212	0/0:9,0:8:17.99:0,18,171	0/0:12,0:12:27.01:0,27,261	0/1:21,2:21:1.33:1,0,333	0/1:6,5:12:0.81:98,0,1	0/0:10,0:9:15.03:0,15,149	0/0:9,0:9:21.03:0,21,206	1/1:6,3:8:8.90:70,9,0	1/1:3,3:6:11.88:92,12,0	0/0:9,0:9:27.05:0,27,274	0/0:16,0:15:36.06:0,36,355	0/0:13,0:13:33.06:0,33,330	0/0:30,0:30:75.11:0,75,734	0/0:34,0:35:86.71:0,87,908	0/1:23,2:26:36.67:37,0,172	0/0:12,0:12:30.06:0,30,305	0/0:17,0:17:36.04:0,36,346	1/1:7,7:14:17.88:139,18,0	1/1:1,11:12:23.90:186,24,0	1/1:5,12:17:23.88:185,24,0	0/0:14,0:14:42.08:0,42,426	0/0:19,1:19:24.65:0,25,395	0/0:18,0:21:45.06:0,45,443	0/0:4,0:4:6.01:0,6,61
chr10	76150183	.	TG	T	260.44	PASS	AB=0.917;AC=12;AF=0.222;AN=54;BaseQRankSum=1.210;DP=123;FS=0.000;HRun=9;HaplotypeScore=19.4315;InbreedingCoeff=0.3993;MQ=96.87;MQ0=0;MQRankSum=-0.068;QD=7.23;ReadPosRankSum=1.458;VQSLOD=-0.5309;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:0,0:2:2.84:0,3,14	0/0:1,0:1:3.01:0,3,34	0/0:8,0:6:15.04:0,15,168	0/0:17,0:11:9.13:0,9,55	0/0:5,0:5:8.57:0,9,79	0/0:5,0:5:15.03:0,15,159	./.	0/0:3,0:3:9.03:0,9,104	1/1:4,0:4:5.92:47,6,0	0/0:3,0:3:6.02:0,6,69	0/0:3,0:3:3.01:0,3,35	1/1:0,3:3:9:79,9,0	0/1:6,0:6:11.88:51,0,12	0/0:2,0:2:6.01:0,6,60	0/0:5,0:5:15.02:0,15,154	0/1:4,1:5:12.56:13,0,104	0/0:4,0:3:8.77:0,9,67	0/0:2,0:2:6.02:0,6,68	0/0:6,0:6:15.04:0,15,173	0/0:2,0:2:3:0,3,29	0/0:4,0:4:3.01:0,3,35	1/1:1,7:8:6.66:126,7,0	1/1:1,4:5:9:82,9,0	1/1:5,0:5:2.21:7,2,0	0/0:2,0:2:6.01:0,6,61	0/0:5,0:5:3.01:0,3,35	0/0:5,0:5:15.03:0,15,158	0/0:3,0:3:9.03:0,9,104
chr10	76155339	.	TA	T	1097.22	PASS	AB=0.936;AC=17;AF=0.304;AN=56;BaseQRankSum=6.847;DP=545;FS=4.920;HRun=14;HaplotypeScore=71.6759;InbreedingCoeff=0.5481;MQ=77.21;MQ0=1;MQRankSum=-0.304;QD=5.54;ReadPosRankSum=3.901;VQSLOD=2.5809;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,3:32:27.71:0,28,514	0/0:8,0:8:17.39:0,17,148	0/0:24,1:18:6.81:0,7,84	0/1:14,0:11:22.60:23,0,26	0/0:30,0:31:53.63:0,54,468	0/0:17,2:19:12.78:0,13,383	0/0:10,4:15:6.27:0,6,186	0/0:31,0:31:43.51:0,44,478	1/1:6,9:14:26.66:183,27,0	0/0:20,1:25:53.67:0,54,456	0/1:24,1:25:16.18:16,0,202	1/1:4,10:14:26.50:185,27,0	1/1:3,10:13:20.81:144,21,0	0/0:20,0:20:42.01:0,42,378	0/0:11,1:12:4.38:0,4,189	0/0:18,0:19:44.69:0,45,384	0/0:31,0:31:65.92:0,66,590	0/1:16,2:18:5.17:5,0,228	0/1:17,3:20:22.77:23,0,225	0/0:24,0:24:29.91:0,30,251	0/0:7,0:8:14.84:0,15,122	1/1:5,12:17:20.70:144,21,0	1/1:1,14:15:20.75:144,21,0	1/1:1,23:28:64.58:414,65,0	0/0:18,1:19:25.61:0,26,356	0/0:18,0:21:35.84:0,36,308	0/1:17,1:19:7.80:8,0,244	0/0:6,0:6:11.99:0,12,106
chr10	76156041	.	A	AAAGG	9902.06	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-12.616;DP=860;FS=1.988;HRun=0;HaplotypeScore=122.6582;InbreedingCoeff=0.9999;MQ=63.56;MQ0=0;MQRankSum=-0.744;QD=41.78;ReadPosRankSum=6.941;VQSLOD=5.2274;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,38:46:81.22:1921,81,0	0/0:14,0:14:36.12:0,36,626	0/0:25,0:22:45.14:0,45,740	0/0:26,0:25:57.18:0,57,911	0/0:31,0:31:78.25:0,78,1290	0/0:26,0:26:66.21:0,66,1080	0/0:42,0:42:89.57:0,90,1696	0/0:27,0:27:72.23:0,72,1174	1/1:2,38:41:81.28:1977,81,0	0/0:31,0:30:84.27:0,84,1359	0/0:21,0:21:60.19:0,60,989	1/1:3,30:35:54.18:1371,54,0	1/1:6,28:34:51.18:1294,51,0	0/0:42,0:42:99:0,117,1895	0/0:34,0:34:90.30:0,90,1533	0/0:48,1:49:56.22:0,56,2095	0/0:34,0:34:90.21:0,90,1441	0/0:24,0:24:63.22:0,63,1076	0/0:15,0:15:45.15:0,45,765	0/0:18,0:18:54.18:0,54,908	0/0:49,0:49:99:0,114,1881	1/1:4,19:23:48.16:977,48,0	1/1:2,23:27:39.61:990,40,0	1/1:4,25:30:54.18:1371,54,0	0/0:28,0:28:69.24:0,69,1190	0/0:32,0:32:75.25:0,75,1261	0/0:42,0:42:99:0,102,1701	0/0:13,0:13:35.62:0,36,558
chr10	76158222	.	GTATA	G	7921.22	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=16.677;DP=703;FS=1.544;HRun=0;HaplotypeScore=132.5387;InbreedingCoeff=0.9940;MQ=95.73;MQ0=0;MQRankSum=-7.781;QD=44.50;ReadPosRankSum=4.706;VQSLOD=5.5805;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:39:75.24:1432,75,0	0/0:12,0:12:36.12:0,36,942	0/0:34,0:34:99:0,102,2640	0/0:34,0:34:93.30:0,93,2325	0/0:20,0:20:47.83:0,48,1293	0/0:18,0:18:54.19:0,54,1433	0/0:30,0:30:90.31:0,90,2465	0/0:34,0:34:99:0,102,2683	1/1:1,21:22:60.21:1163,60,0	0/0:21,0:21:63.21:0,63,1671	0/0:14,0:14:39.13:0,39,1068	1/1:3,29:32:90.26:1641,90,0	1/1:1,31:32:84.29:1623,84,0	0/0:35,0:35:99:0,105,2806	0/0:31,0:31:93.32:0,93,2515	0/0:27,0:27:78.25:0,78,2078	0/0:27,0:27:78.27:0,78,2138	0/0:18,0:18:54.19:0,54,1479	0/0:16,0:16:48.16:0,48,1298	0/0:22,0:22:59.65:0,60,1643	0/0:39,0:39:99:0,114,2959	1/1:0,10:10:12.04:232,12,0	1/1:4,12:16:24.08:455,24,0	1/1:1,26:27:72.25:1375,72,0	0/0:24,0:24:69.22:0,69,1788	0/0:20,0:20:60.19:0,60,1533	0/0:35,0:35:99:0,105,2737	0/0:14,0:14:42.14:0,42,1150
chr10	76163052	.	GA	G	3445.41	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.608;DP=704;FS=6.371;HRun=10;HaplotypeScore=115.6121;InbreedingCoeff=0.9927;MQ=60.60;MQ0=3;MQRankSum=-4.918;QD=20.51;ReadPosRankSum=-1.361;VQSLOD=2.6675;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,30:35:83.97:725,84,0	0/0:7,0:7:15.04:0,15,166	0/0:21,0:14:29.74:0,30,259	0/0:11,1:11:18.88:0,19,211	0/0:27,0:27:75.18:0,75,813	0/0:23,0:23:66.17:0,66,722	0/0:28,0:28:72.19:0,72,797	0/0:32,0:32:66.11:0,66,710	1/1:5,26:31:77.98:674,78,0	0/0:36,0:36:78.19:0,78,843	0/0:17,0:17:42.08:0,42,453	1/1:4,17:21:14.81:356,15,0	1/1:1,16:17:47.99:416,48,0	0/0:26,0:27:62.72:0,63,648	0/0:32,1:33:43.11:0,43,692	0/0:33,1:34:64.16:0,64,919	0/0:28,0:28:66.16:0,66,719	0/0:27,0:28:80.88:0,81,857	0/0:28,0:28:72.19:0,72,796	0/0:22,0:23:59.99:0,60,638	0/0:35,1:36:76.10:0,76,997	1/1:6,15:21:46.23:391,46,0	1/1:1,14:16:41.99:363,42,0	1/1:3,24:27:59.99:520,60,0	0/0:25,1:26:34.07:0,34,581	0/0:26,0:26:66.16:0,66,717	0/0:21,0:21:54.15:0,54,597	0/0:21,0:21:63.11:0,63,672
chr10	76163077	.	AATGCATACATAC	A	2693.75	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.337;DP=689;FS=3.132;HRun=0;HaplotypeScore=263.0866;InbreedingCoeff=0.9501;MQ=56.98;MQ0=2;MQRankSum=-4.628;QD=18.20;ReadPosRankSum=-0.425;VQSLOD=2.2115;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:39:30.03:473,30,0	0/0:7,0:7:21.04:0,21,741	0/0:12,0:8:11.95:0,12,146	0/0:10,0:10:18.99:0,19,163	0/0:25,0:25:63.20:0,63,2810	0/0:22,0:22:60.21:0,60,2556	0/0:30,0:30:81.24:0,81,2896	0/0:45,0:45:99:0,105,4399	1/1:15,9:24:45.60:1303,46,0	0/0:36,0:36:99:0,99,4625	0/0:18,0:18:42.14:0,42,2152	1/1:17,0:17:30.03:361,30,0	1/1:16,0:16:3.63:244,4,0	0/0:28,0:28:66.21:0,66,3043	0/0:28,0:28:66.23:0,66,2270	0/0:38,0:38:99:0,102,4786	0/0:26,0:26:60.19:0,60,2450	0/0:31,0:30:48.97:0,49,3597	0/0:29,0:29:52.23:0,52,3282	0/0:20,0:20:54.19:0,54,2786	0/0:40,0:40:99:0,99,4938	1/1:17,0:16:15.03:187,15,0	1/1:13,0:13:11.94:98,12,0	1/1:22,0:22:13.86:218,14,0	0/0:20,0:20:48.16:0,48,2273	0/0:30,0:30:84.29:0,84,4128	0/0:22,0:22:57.20:0,57,2966	0/0:23,0:23:60.21:0,60,2895
chr10	76163091	.	TGC	T	358.23	PASS	AB=0.778;AC=9;AF=0.161;AN=56;BaseQRankSum=9.798;DP=650;FS=0.678;HRun=0;HaplotypeScore=138.0239;InbreedingCoeff=0.2557;MQ=55.85;MQ0=4;MQRankSum=-6.687;QD=2.61;ReadPosRankSum=1.840;VQSLOD=2.6087;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:2.58:113,3,0	0/0:5,0:5:15.02:0,15,265	0/0:3,0:2:3.01:0,3,43	0/0:5,0:5:8.53:0,9,75	0/0:27,0:27:78.24:0,78,1504	0/0:23,0:23:66.23:0,66,1263	0/0:24,0:24:72.23:0,72,1347	0/0:45,0:43:99:0,126,2425	1/1:21,0:21:3.31:86,3,0	0/0:36,0:36:99:0,105,1976	0/0:17,0:17:51.16:0,51,995	0/1:14,4:18:95.64:96,0,209	0/1:8,6:15:31.95:87,0,32	0/0:26,0:26:75.26:0,75,1483	0/0:30,0:30:65.98:0,66,896	0/0:34,0:34:99:0,99,1952	0/0:22,0:22:63.19:0,63,1186	0/0:32,0:31:95.79:0,96,1746	0/0:26,0:24:72.25:0,72,1385	0/0:20,0:20:60.21:0,60,1181	0/0:44,0:44:99:0,120,2355	0/1:11,7:17:3:67,0,3	0/1:9,5:14:35.61:36,0,89	0/1:16,2:18:4.52:5,0,134	0/0:19,0:19:50.90:0,51,940	0/0:32,0:32:93.29:0,93,1776	0/0:23,0:23:66.23:0,66,1289	0/0:20,0:20:60.21:0,60,1211
chr10	76163094	.	ATGCATG	A	1365.65	PASS	AB=0.830;AC=9;AF=0.161;AN=56;BaseQRankSum=11.621;DP=648;FS=0.000;HRun=0;HaplotypeScore=178.3971;InbreedingCoeff=0.3778;MQ=54.87;MQ0=5;MQRankSum=-5.086;QD=10.04;ReadPosRankSum=1.573;VQSLOD=2.7696;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:72.17:72,0,89	0/0:4,0:4:12.04:0,12,424	0/0:2,0:1:3.01:0,3,43	0/0:4,0:4:2.14:0,2,76	0/0:25,0:25:75.26:0,75,2382	0/0:21,0:21:60.21:0,60,1799	0/0:26,0:26:78.27:0,78,2118	0/0:46,0:43:99:0,129,3472	1/1:21,0:21:25.57:412,26,0	0/0:36,0:36:99:0,105,3258	0/0:17,0:17:51.18:0,51,1682	0/1:12,4:16:31.27:198,0,31	0/1:10,6:16:0.66:314,0,1	0/0:27,0:27:81.26:0,81,2498	0/0:27,0:27:57.16:0,57,1061	0/0:35,0:35:99:0,102,3264	0/0:23,0:23:66.23:0,66,1941	0/0:33,0:32:83.17:0,83,2889	0/0:26,0:24:72.25:0,72,2205	0/0:22,0:22:66.23:0,66,2150	0/0:44,0:44:99:0,120,3870	1/1:12,7:18:21.52:294,22,0	0/1:8,5:13:32.27:142,0,32	0/1:16,2:18:10.37:84,0,10	0/0:18,0:18:47.83:0,48,1425	0/0:33,0:33:99:0,99,2965	0/0:23,0:23:66.23:0,66,2093	0/0:20,0:20:60.21:0,60,1986
chr10	76163100	.	GCATA	G	463.35	PASS	AB=0.983;AC=13;AF=0.232;AN=56;BaseQRankSum=9.071;DP=655;FS=1.256;HRun=0;HaplotypeScore=154.3776;InbreedingCoeff=0.0217;MQ=54.81;MQ0=6;MQRankSum=-6.393;QD=2.01;ReadPosRankSum=2.721;VQSLOD=1.9909;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:7.45:0,7,102	0/0:5,0:5:12.03:0,12,239	1/1:6,0:2:2.04:6,2,0	0/0:4,0:4:2.96:0,3,19	0/1:24,1:25:2.21:2,0,873	0/0:22,0:22:29.94:0,30,542	0/0:21,0:21:33.04:0,33,511	0/0:44,0:41:17.98:0,18,169	0/1:25,0:25:56.87:57,0,122	0/1:34,2:36:21.24:21,0,1255	0/0:17,0:17:36.08:0,36,690	0/1:15,0:15:16.03:16,0,157	0/1:16,0:16:30.13:30,0,58	0/0:27,0:27:54.14:0,54,1090	1/1:8,19:27:27.09:426,27,0	0/0:35,0:35:63.16:0,63,1309	0/0:24,0:24:42.05:0,42,713	0/0:32,1:32:18.81:0,19,1199	0/0:28,0:24:30.10:0,30,671	0/0:22,0:22:54.13:0,54,1090	0/0:48,0:48:47.78:0,48,1718	0/1:15,0:14:18.65:19,0,71	0/1:14,0:14:5.72:6,0,122	0/0:19,0:19:1.50:0,2,135	0/1:19,0:19:17.28:17,0,496	0/1:30,2:32:10.18:10,0,1068	0/0:25,0:25:51.11:0,51,949	0/0:21,0:21:39.09:0,39,786
chr10	76164517	.	AC	A	6995.56	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.982;DP=770;FS=5.918;HRun=1;HaplotypeScore=72.9710;InbreedingCoeff=0.9991;MQ=71.76;MQ0=0;MQRankSum=-1.243;QD=38.65;ReadPosRankSum=4.422;VQSLOD=5.4849;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:75.25:1049,75,0	0/0:9,0:9:27.06:0,27,404	0/0:31,0:26:37.31:0,37,1014	0/0:28,0:22:57.96:0,58,954	0/0:26,0:26:78.27:0,78,1247	0/0:33,0:33:99:0,99,1582	0/0:29,0:29:87.30:0,87,1391	0/0:35,0:35:99:0,105,1656	1/1:0,25:25:69.23:964,69,0	0/0:41,0:41:99:0,114,1802	0/0:17,0:17:48.16:0,48,767	1/1:0,24:24:72.24:1007,72,0	1/1:0,26:26:72.24:1007,72,0	0/0:30,0:30:90.31:0,90,1435	0/0:31,0:31:93.30:0,93,1464	0/0:31,0:31:93.32:0,93,1487	0/0:34,0:34:99:0,99,1554	0/0:26,0:26:78.24:0,78,1200	0/0:32,0:32:96.32:0,96,1504	0/0:24,0:24:72.25:0,72,1142	0/0:45,0:45:99:0,135,2158	1/1:1,23:24:69.23:955,69,0	1/1:0,31:31:80.97:1133,81,0	1/1:0,22:22:63.21:881,63,0	0/0:25,0:25:72.25:0,72,1147	0/0:36,0:36:99:0,108,1705	0/0:19,0:19:57.19:0,57,908	0/0:7,0:7:21.07:0,21,332
chr10	76165134	.	C	CG	4500.11	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-10.152;DP=553;FS=8.560;HRun=6;HaplotypeScore=58.9570;InbreedingCoeff=0.9012;MQ=74.36;MQ0=0;MQRankSum=-2.038;QD=25.86;ReadPosRankSum=2.785;VQSLOD=5.0544;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,44:49:99:1410,114,0	0/0:4,0:4:11.98:0,12,111	0/1:13,0:13:10.60:11,0,139	0/0:13,0:13:23.78:0,24,234	0/0:10,0:10:24.03:0,24,237	0/0:18,0:18:51.07:0,51,504	0/0:29,0:29:81.03:0,81,780	0/0:22,0:22:57.05:0,57,556	1/1:1,18:19:48.14:604,48,0	0/0:24,0:24:57.12:0,57,581	0/0:8,0:8:21.03:0,21,206	1/1:0,30:30:72.01:906,72,0	1/1:4,19:23:54.17:670,54,0	0/0:21,0:21:54.10:0,54,544	0/0:24,0:24:63.08:0,63,624	0/0:9,0:9:24.04:0,24,239	0/0:39,0:39:99:0,108,1071	0/0:15,0:15:39.05:0,39,386	0/0:19,0:19:48.10:0,48,488	0/0:11,0:11:24.05:0,24,244	0/0:52,0:52:99:0,141,1424	1/1:4,11:15:20.92:258,21,0	1/1:1,10:11:18.06:227,18,0	1/1:2,12:14:33.11:415,33,0	0/0:16,0:16:44.62:0,45,406	0/0:16,0:16:39.08:0,39,397	0/0:23,0:23:63.13:0,63,641	0/0:6,0:6:12.03:0,12,122
chr10	76165595	.	GA	G	3568.29	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=7.921;DP=517;FS=7.196;HRun=3;HaplotypeScore=71.8542;InbreedingCoeff=0.8974;MQ=76.07;MQ0=0;MQRankSum=-3.429;QD=29.49;ReadPosRankSum=2.505;VQSLOD=3.2900;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:26.73:139,0,27	0/0:10,0:10:30.02:0,30,366	0/0:11,0:10:23.80:0,24,271	0/0:18,1:19:17.79:0,18,272	0/0:24,0:24:53.16:0,53,785	0/0:16,0:16:45.14:0,45,616	0/0:23,1:24:33.88:0,34,581	0/0:23,0:23:57.06:0,57,645	1/1:4,12:16:48.13:566,48,0	0/0:16,0:16:38.31:0,38,460	0/0:14,0:14:42.11:0,42,533	1/1:0,20:20:54.17:658,54,0	1/1:1,23:24:66.08:775,66,0	0/0:17,0:17:34.64:0,35,554	0/0:27,0:27:78.17:0,78,992	0/0:18,0:18:54.12:0,54,700	0/0:34,0:34:99:0,99,1298	0/0:21,0:21:60.12:0,60,793	0/0:23,0:23:63.17:0,63,729	0/0:17,0:17:39.07:0,39,449	0/0:25,0:25:51.05:0,51,737	1/1:2,19:21:61.07:731,61,0	1/1:2,8:11:32.94:365,33,0	1/1:5,7:11:30.06:333,30,0	0/0:16,0:16:48.07:0,48,571	0/0:20,0:20:49:0,49,618	0/0:13,0:13:39.08:0,39,487	0/0:8,0:8:24.04:0,24,277
chr10	76165598	.	AC	A	1036.83	PASS	AB=0.929;AC=14;AF=0.250;AN=56;BaseQRankSum=12.277;DP=527;FS=0.000;HRun=10;HaplotypeScore=82.2937;InbreedingCoeff=0.7567;MQ=74.34;MQ0=0;MQRankSum=-3.837;QD=7.15;ReadPosRankSum=2.768;VQSLOD=1.7587;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:29.99:0,30,296	0/0:9,0:9:24.04:0,24,249	0/0:12,0:11:20.09:0,20,172	0/1:18,0:18:6:6,0,177	0/0:23,1:24:37.12:0,37,618	0/0:16,0:16:48.12:0,48,523	0/0:22,0:22:18.94:0,19,400	0/0:22,0:22:33.06:0,33,343	1/1:18,0:18:7.58:154,8,0	0/1:15,3:18:39.86:40,0,278	0/0:15,0:15:36.04:0,36,383	1/1:20,0:20:50.46:255,50,0	1/1:23,1:24:59.10:303,59,0	0/0:16,1:17:13.10:0,13,355	0/0:28,0:28:66.16:0,66,720	0/0:19,0:19:45.12:0,45,498	0/0:35,0:35:87.13:0,87,929	0/0:21,0:21:54.10:0,54,577	0/0:21,1:22:31.09:0,31,562	0/0:16,0:16:33.06:0,33,348	0/0:21,3:24:5.06:0,5,483	1/1:21,0:21:55.28:252,55,0	1/1:13,0:13:28.81:130,29,0	1/1:13,0:12:5.45:79,5,0	0/0:16,0:16:33.07:0,33,355	0/0:19,1:20:19.05:0,19,423	0/0:16,0:16:34.25:0,34,321	0/0:8,0:8:15.04:0,15,166
chr10	76165648	.	GAGGTCTGGGTCTCAGAGAAC	G	9461.66	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.600;DP=542;FS=3.048;HRun=0;HaplotypeScore=295.0423;InbreedingCoeff=0.9933;MQ=94.47;MQ0=1;MQRankSum=-12.106;QD=111.31;ReadPosRankSum=4.198;VQSLOD=4.3128;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.30:0,87,8170	0/0:6,0:6:18.06:0,18,1720	0/0:26,0:25:68.39:0,68,4144	0/0:36,0:36:87.62:0,88,4438	0/0:19,0:19:57.20:0,57,4947	0/0:22,0:21:60.19:0,60,4738	0/0:17,0:17:51.18:0,51,4604	0/0:27,0:27:72.24:0,72,5163	1/1:5,15:20:48.16:2555,48,0	0/0:29,0:29:84.29:0,84,7663	0/0:14,0:14:42.14:0,42,3675	1/1:3,7:10:24.08:1224,24,0	1/1:8,10:18:36.12:1894,36,0	0/0:17,0:17:51.17:0,51,4256	0/0:26,0:26:75.24:0,75,6187	0/0:17,0:17:48.16:0,48,4573	0/0:33,0:33:93.32:0,93,8091	0/0:14,0:14:42.14:0,42,3538	0/0:23,0:23:66.21:0,66,4794	0/0:15,0:15:45.15:0,45,3764	0/0:35,0:34:99:0,99,8756	1/1:3,9:12:24.08:1224,24,0	1/1:4,9:13:26.90:1299,27,0	1/1:2,10:11:24.08:1266,24,0	0/0:9,0:9:24.08:0,24,2290	0/0:16,0:16:45.15:0,45,3824	0/0:21,0:21:60.21:0,60,5224	0/0:5,0:5:15.05:0,15,1287
chr10	76167411	.	C	CTTT	2334.14	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=6.360;DP=494;FS=0.000;HRun=14;HaplotypeScore=104.8802;InbreedingCoeff=0.8488;MQ=66.06;MQ0=2;MQRankSum=-7.885;QD=16.21;ReadPosRankSum=-3.325;VQSLOD=1.7942;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,21:45:73.21:972,73,0	0/0:7,0:7:15:0,15,154	0/1:16,0:15:11.94:19,0,12	0/0:14,0:9:5.74:0,6,42	0/0:23,0:26:20.91:0,21,360	0/0:21,0:22:43.11:0,43,409	0/0:11,0:12:32.87:0,33,311	0/0:22,0:25:36.81:0,37,353	1/1:15,1:19:35.11:475,35,0	0/0:9,0:10:14.82:0,15,135	0/0:10,0:13:23.53:0,24,199	1/1:10,1:11:16.94:204,17,0	1/1:10,1:12:14.39:129,14,0	0/0:19,0:19:34.51:0,35,370	0/0:22,0:23:32.43:0,32,346	0/0:16,0:18:38.75:0,39,387	0/0:17,0:22:5.52:0,6,294	0/0:18,0:20:34.46:0,34,351	0/0:17,0:20:37.81:0,38,357	0/0:10,0:10:14.74:0,15,141	0/0:8,0:12:14.90:0,15,141	1/1:11,0:16:18.95:282,19,0	1/1:7,3:14:26.98:330,27,0	1/1:6,1:10:9.22:118,9,0	0/0:12,0:13:23.79:0,24,233	0/0:15,0:17:19.20:0,19,213	0/0:24,0:25:48.88:0,49,490	0/0:19,0:21:47.65:0,48,464
chr10	76174681	.	CT	C	5115.14	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.670;DP=589;FS=2.169;HRun=1;HaplotypeScore=67.3072;InbreedingCoeff=0.9992;MQ=77.75;MQ0=0;MQRankSum=-2.342;QD=37.89;ReadPosRankSum=2.494;VQSLOD=5.6070;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:99:1467,105,0	0/0:7,0:7:21.07:0,21,336	0/0:18,0:19:53.43:0,53,742	0/0:19,0:19:42.88:0,43,686	0/0:23,0:23:66.22:0,66,1054	0/0:16,0:16:48.16:0,48,767	0/0:28,0:28:84.27:0,84,1315	0/0:25,0:25:72.23:0,72,1110	1/1:0,14:14:36.12:503,36,0	0/0:25,0:25:75.24:0,75,1174	0/0:17,0:17:51.15:0,51,768	1/1:0,18:18:42.14:587,42,0	1/1:0,13:13:39.13:545,39,0	0/0:17,0:17:51.17:0,51,815	0/0:14,0:14:42.14:0,42,671	0/0:15,0:15:45.14:0,45,695	0/0:27,0:27:81.21:0,81,1218	0/0:27,0:27:78.23:0,78,1197	0/0:23,0:23:69.05:0,69,1046	0/0:18,0:18:54.18:0,54,861	0/0:47,0:47:99:0,141,2172	1/1:0,12:12:36.12:503,36,0	1/1:0,17:17:48.16:671,48,0	1/1:0,22:22:60.20:839,60,0	0/0:14,0:14:42.10:0,42,619	0/0:27,0:27:81.27:0,81,1274	0/0:24,0:24:72.20:0,72,1120	0/0:22,0:22:66.23:0,66,1054
chr10	76177435	.	A	AGGATG	1873.28	PASS	AB=0.918;AC=15;AF=0.278;AN=54;BaseQRankSum=11.434;DP=555;FS=19.466;HRun=0;HaplotypeScore=318.2726;InbreedingCoeff=-0.3882;MQ=42.46;MQ0=8;MQRankSum=-5.555;QD=5.59;ReadPosRankSum=5.762;VQSLOD=0.8847;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:19.99:0,20,1269	0/0:10,0:10:11.94:0,12,399	0/0:22,0:10:24.07:0,24,389	0/0:29,0:11:15.55:0,16,238	0/1:19,4:23:99:199,0,623	0/1:17,1:18:33.08:33,0,737	0/0:24,0:25:17.03:0,17,1256	0/0:12,0:10:26.99:0,27,574	0/1:30,0:30:21.52:22,0,1479	0/1:25,3:28:99:242,0,997	0/1:11,3:15:99:165,0,267	0/0:20,0:20:33.19:0,33,855	0/1:15,0:15:42.68:43,0,482	0/1:14,3:17:99:146,0,778	0/1:23,1:24:28.78:29,0,1227	0/1:26,0:26:95.59:96,0,925	0/0:15,0:15:41.72:0,42,813	0/0:10,0:10:30.10:0,30,667	0/0:7,0:7:20.96:0,21,357	0/1:13,3:16:99:145,0,242	0/0:16,0:16:36.02:0,36,692	0/1:35,0:34:99:163,0,708	0/1:20,0:21:99:113,0,306	0/0:27,0:26:57.66:0,58,1260	0/1:16,7:24:99:436,0,645	0/1:23,2:26:99:182,0,1013	0/1:17,0:17:16.09:16,0,678	./.
chr10	76177444	.	A	ATG	114.16	PASS	AB=0.974;AC=11;AF=0.196;AN=56;BaseQRankSum=10.091;DP=539;FS=5.413;HRun=0;HaplotypeScore=316.4025;InbreedingCoeff=-0.1264;MQ=37.46;MQ0=12;MQRankSum=-3.310;QD=0.64;ReadPosRankSum=3.550;VQSLOD=1.5338;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:52.94:0,53,734	0/1:10,0:10:8.10:8,0,201	0/0:17,0:7:14.68:0,15,157	0/0:31,0:10:8.95:0,9,153	0/0:22,0:23:7.67:0,8,398	0/0:19,0:18:22.58:0,23,418	0/0:24,0:24:51.33:0,51,809	0/0:12,0:10:24.08:0,24,384	0/1:30,0:30:57.82:58,0,722	0/1:27,1:28:4.59:5,0,750	0/1:12,2:14:4.12:4,0,119	0/0:18,0:18:10.34:0,10,489	0/0:16,0:16:1.15:0,1,323	0/0:16,0:16:37.30:0,37,492	0/0:26,0:26:46.35:0,46,808	0/1:24,0:24:84.98:85,0,464	0/0:12,1:13:30.39:0,30,426	0/1:10,0:10:27.76:28,0,357	0/0:7,0:7:15.50:0,16,214	0/1:19,0:19:11.14:11,0,273	0/0:15,0:15:24.08:0,24,339	0/0:29,2:31:39.39:0,39,583	0/0:18,2:21:5.60:0,6,236	0/0:25,0:24:43.36:0,43,583	0/0:23,1:24:48.75:0,49,532	0/1:22,2:23:36.55:37,0,498	0/1:18,0:18:1.59:2,0,411	1/1:2,0:2:0.47:1,0,0
chr10	76177450	.	GA	G	6760.58	PASS	AB=0.728;AC=30;AF=0.536;AN=56;BaseQRankSum=-13.977;DP=535;FS=7.998;HRun=1;HaplotypeScore=267.2795;InbreedingCoeff=-0.7627;MQ=36.03;MQ0=15;MQRankSum=1.425;QD=12.68;ReadPosRankSum=-2.568;VQSLOD=2.4646;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,9:18:20.98:361,0,21	0/1:7,4:11:66.12:101,0,66	0/1:16,2:6:29.87:30,0,83	0/1:20,6:10:19.31:115,0,19	0/1:15,8:23:99:261,0,153	0/1:12,5:16:99:244,0,113	0/1:8,14:23:94.03:522,0,94	0/1:11,8:17:50.58:146,0,51	0/1:16,13:29:99:435,0,503	0/1:12,14:26:99:393,0,360	0/1:15,2:17:37.37:37,0,300	0/1:9,9:18:44.37:339,0,44	0/1:11,6:17:99:172,0,299	0/1:6,8:14:99:241,0,115	0/1:7,18:25:99:572,0,109	0/1:14,10:24:99:337,0,195	0/1:2,9:11:22.31:280,0,22	1/1:3,5:8:6.11:257,6,0	0/1:7,5:11:99:137,0,117	0/1:15,5:20:99:142,0,310	1/1:5,8:13:18.06:219,18,0	0/1:24,8:31:99:212,0,738	0/1:21,3:24:82.47:82,0,384	1/1:9,15:23:17.83:352,18,0	0/1:18,7:25:99:241,0,408	0/1:15,8:22:99:261,0,319	0/1:9,7:16:99:272,0,129	0/0:2,0:2:3.01:0,3,48
chr10	76177456	.	G	GA	4614.71	PASS	AB=0.762;AC=29;AF=0.518;AN=56;BaseQRankSum=-9.988;DP=524;FS=5.803;HRun=2;HaplotypeScore=278.0824;InbreedingCoeff=-0.7176;MQ=36.08;MQ0=17;MQRankSum=0.297;QD=9.10;ReadPosRankSum=2.880;VQSLOD=2.7931;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:7,9:16:38.32:315,0,38	0/1:7,3:10:54.05:54,0,56	0/1:18,2:6:32.56:33,0,68	0/1:23,1:9:30.38:60,0,30	0/1:18,6:24:80.36:80,0,107	0/1:11,4:14:79.51:87,0,80	0/1:13,9:22:99:306,0,148	0/1:17,3:18:99:116,0,119	0/1:15,13:28:99:334,0,288	0/1:15,11:26:99:339,0,321	0/0:15,1:16:5.89:0,6,253	0/1:8,8:16:37.89:239,0,38	0/1:12,5:17:99:132,0,191	0/1:6,8:14:99:209,0,100	0/1:9,16:25:84.78:469,0,85	0/1:14,9:23:99:273,0,189	1/1:4,7:11:1.58:178,2,0	1/1:2,5:7:11.94:155,12,0	0/1:12,4:14:99:106,0,175	0/1:19,3:22:58.19:58,0,276	1/1:7,7:14:17.99:182,18,0	0/1:24,8:31:99:124,0,457	0/1:20,3:23:40.31:40,0,209	0/1:10,10:19:19.74:76,0,20	0/1:17,7:24:99:142,0,327	0/1:16,7:22:99:249,0,229	0/1:9,6:15:47.20:258,0,47	0/0:1,0:1:3.01:0,3,39
chr10	76177457	.	AGG	A	2744.37	PASS	AB=0.981;AC=27;AF=0.482;AN=56;BaseQRankSum=-9.040;DP=519;FS=5.178;HRun=2;HaplotypeScore=282.9387;InbreedingCoeff=-0.7826;MQ=35.93;MQ0=17;MQRankSum=0.960;QD=5.47;ReadPosRankSum=2.496;VQSLOD=-0.1529;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,2:16:57.78:227,0,58	0/1:10,0:10:19.57:20,0,31	0/1:19,0:5:17.22:17,0,91	0/1:24,0:9:34.01:44,0,34	0/1:24,0:24:32.46:32,0,163	0/1:15,0:14:60.74:61,0,93	0/1:20,1:21:99:213,0,177	0/1:18,3:19:99:114,0,188	0/1:28,0:28:99:207,0,389	0/1:26,0:26:99:194,0,285	0/0:16,0:16:19.57:0,20,336	0/1:15,0:15:11.19:163,0,11	0/1:17,0:17:67.55:68,0,241	0/1:14,0:14:99:126,0,123	0/1:24,0:24:81.31:294,0,81	0/1:23,0:23:99:151,0,254	0/1:10,1:11:11.81:133,0,12	0/1:7,0:7:31.16:85,0,31	0/1:14,1:13:93.55:94,0,225	0/1:21,0:21:24.55:25,0,330	1/1:14,0:14:17.95:154,18,0	0/1:32,0:31:73.60:74,0,493	0/1:23,0:23:5.85:6,0,399	0/1:19,1:19:13.19:72,0,13	0/1:24,0:24:69.97:70,0,452	0/1:23,0:22:99:136,0,233	0/1:15,0:15:99:119,0,110	0/0:1,0:1:3.01:0,3,61
chr10	76177461	.	GGAT	G	1244.62	PASS	AB=0.914;AC=20;AF=0.357;AN=56;BaseQRankSum=2.061;DP=496;FS=44.746;HRun=0;HaplotypeScore=282.3208;InbreedingCoeff=-0.5469;MQ=35.80;MQ0=15;MQRankSum=-0.995;QD=3.32;ReadPosRankSum=-3.939;VQSLOD=1.0861;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:40.38:0,40,382	0/1:6,3:9:27.01:27,0,136	0/1:18,0:5:4.58:5,0,129	0/0:20,0:7:0.46:0,0,22	0/1:16,6:22:62.05:62,0,93	0/1:14,1:14:25.19:25,0,87	0/1:17,2:19:20.69:21,0,292	0/1:23,0:21:66.90:67,0,162	0/0:29,0:29:21.72:0,22,577	0/1:22,4:26:99:202,0,409	0/1:11,3:14:48.10:110,0,48	0/0:14,0:14:16.15:0,16,288	0/1:17,0:17:8.81:9,0,254	0/1:12,1:13:22.52:23,0,283	0/1:22,2:24:27.23:27,0,541	0/1:19,3:22:49.82:50,0,399	0/0:9,0:9:11.76:0,12,151	0/0:7,0:7:17.83:0,18,175	0/0:15,0:13:9.97:0,10,217	0/1:18,2:20:90.90:91,0,156	0/0:11,0:11:17.90:0,18,186	0/1:29,1:29:99:200,0,226	0/1:23,0:23:94.52:95,0,149	0/1:18,0:17:0.69:1,0,70	0/1:18,5:23:99:107,0,220	0/1:18,4:21:99:202,0,244	0/1:14,1:15:59.39:59,0,157	0/1:2,0:2:15.97:16,0,27
chr10	76177850	.	A	AG	176.65	PASS	AB=0.824;AC=19;AF=0.432;AN=44;BaseQRankSum=1.679;DP=101;FS=1.900;HRun=2;HaplotypeScore=63.6732;InbreedingCoeff=0.0564;MQ=26.16;MQ0=11;MQRankSum=0.423;QD=2.68;ReadPosRankSum=-0.014;VQSLOD=-0.4908;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:3,1:4:3.97:4,0,36	0/1:5,0:5:2.27:2,0,27	./.	./.	0/0:5,1:6:1.25:0,1,3	0/1:4,3:7:16.03:23,0,16	./.	./.	1/1:0,2:2:5.88:36,6,0	0/1:7,1:6:5.25:31,0,5	0/1:4,1:4:0.46:27,0,0	0/0:2,0:1:2.04:0,2,6	1/1:2,1:2:5.88:36,6,0	0/0:2,1:2:1.82:0,2,5	0/0:3,0:3:6.23:0,6,19	0/1:4,1:5:10.01:10,0,17	0/1:2,1:2:1.70:6,0,2	./.	0/1:2,1:3:13.22:13,0,27	0/0:4,1:5:4.56:0,5,17	0/0:2,1:2:1.25:0,1,3	0/0:3,0:2:2.04:0,2,6	1/1:3,0:2:3.38:11,3,0	./.	0/1:10,2:11:6.15:63,0,6	1/1:3,1:2:0.47:1,0,0	1/1:1,1:2:5.65:32,6,0	0/0:6,0:6:5.31:0,5,26
chr10	76177854	.	GA	G	487.11	PASS	AB=0.867;AC=37;AF=0.771;AN=48;BaseQRankSum=-1.083;DP=116;FS=5.330;HRun=2;HaplotypeScore=50.3467;InbreedingCoeff=0.1360;MQ=25.47;MQ0=17;MQRankSum=0.118;QD=4.97;ReadPosRankSum=-2.122;VQSLOD=-0.1280;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:3,1:4:6.99:7,0,13	0/0:5,0:5:3.25:0,3,16	./.	./.	1/1:5,2:7:3.70:17,4,0	1/1:4,4:8:0.07:97,0,0	./.	1/1:3,0:1:2.04:6,2,0	1/1:0,2:2:5.97:45,6,0	0/0:10,1:7:1.78:0,2,32	1/1:4,1:4:4.99:24,5,0	0/1:3,0:1:0:0,0,0	1/1:1,2:2:5.81:51,6,0	1/1:2,1:2:2.96:35,3,0	0/1:3,0:3:1.34:2,0,1	1/1:5,0:5:5.54:39,6,0	0/1:3,1:3:0.80:1,0,6	./.	0/1:3,1:4:4.41:4,0,50	1/1:5,0:5:7.44:45,7,0	1/1:4,1:2:1.55:4,2,0	1/1:2,1:2:3.01:34,3,0	1/1:4,0:3:1.03:3,1,0	1/1:1,0:1:0.89:2,1,0	1/1:10,2:11:9.99:112,10,0	0/1:2,2:2:6.32:10,0,6	1/1:1,1:2:5.96:43,6,0	0/1:8,0:7:20.19:20,0,25
chr10	76177856	.	AG	A	362.44	PASS	AB=0.951;AC=34;AF=0.680;AN=50;BaseQRankSum=-1.517;DP=137;FS=5.066;HRun=2;HaplotypeScore=53.6868;InbreedingCoeff=0.0812;MQ=25.28;MQ0=18;MQRankSum=0.594;QD=3.36;ReadPosRankSum=-2.028;VQSLOD=-0.5732;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:4:2.95:14,0,3	0/1:5,0:5:18.29:18,0,21	./.	./.	1/1:6,1:7:5.10:22,5,0	0/1:9,0:9:20.34:29,0,20	./.	0/1:6,0:3:3.28:3,0,13	1/1:2,0:2:3.37:10,3,0	0/0:12,0:8:13.50:0,13,86	1/1:4,1:4:6.29:46,6,0	1/1:3,0:1:2.88:15,3,0	1/1:4,0:3:1.31:19,1,0	1/1:4,0:3:7.71:42,8,0	0/1:4,0:4:3.95:4,0,5	1/1:5,0:5:4.76:38,5,0	0/0:4,0:3:5.17:0,5,19	1/1:1,0:1:1.55:4,2,0	0/0:5,0:5:9.40:0,9,57	0/1:6,1:7:13.54:46,0,14	1/1:5,1:3:1.41:4,1,0	1/1:3,0:2:2.84:14,3,0	1/1:5,0:5:3.93:19,4,0	1/1:3,0:2:0.89:2,1,0	0/1:13,1:13:8.34:75,0,8	0/0:5,0:2:4.15:0,4,20	1/1:2,0:2:4.50:16,4,0	0/1:6,2:7:57.50:58,0,82
chr10	76179076	.	CTG	C	603.21	PASS	AB=0.909;AC=13;AF=0.260;AN=50;BaseQRankSum=6.489;DP=806;FS=2.068;HRun=0;HaplotypeScore=108.6763;InbreedingCoeff=-0.2385;MQ=67.51;MQ0=11;MQRankSum=-0.095;QD=1.55;ReadPosRankSum=2.459;VQSLOD=2.1404;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,15:39:18.11:242,0,18	0/1:8,0:8:9.88:10,0,90	./.	./.	0/1:22,0:22:6.43:6,0,284	0/0:25,0:25:5.19:0,5,315	0/1:32,3:34:37.75:38,0,752	0/0:30,0:29:19.88:0,20,194	0/0:16,0:16:8.20:0,8,60	0/0:34,1:34:41.66:0,42,575	0/0:13,0:13:12.04:0,12,178	1/1:23,0:23:0.23:1,0,0	0/0:16,0:16:2.22:0,2,7	0/0:28,1:29:11.50:0,11,590	0/1:34,3:38:87.16:87,0,523	0/1:32,4:37:89.42:89,0,641	0/1:35,1:35:59.26:59,0,524	0/1:22,3:25:46.81:47,0,466	0/1:25,2:26:48.06:48,0,165	0/0:28,0:28:30.08:0,30,434	0/1:72,6:76:36.93:37,0,803	0/0:14,0:14:0:0,0,0	./.	0/0:28,0:28:2.94:0,3,18	0/0:35,0:35:13.23:0,13,538	0/0:37,2:39:13.96:0,14,512	0/0:23,1:23:36.12:0,36,528	0/1:16,3:19:70.81:71,0,247
chr10	76179412	.	GTC	G	1394.60	PASS	AC=2;AF=0.045;AN=44;BaseQRankSum=8.830;DP=795;FS=0.000;HRun=0;HaplotypeScore=120.9113;InbreedingCoeff=0.9978;MQ=55.17;MQ0=13;MQRankSum=2.491;QD=25.36;ReadPosRankSum=1.902;VQSLOD=4.2327;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,52:55:99:1487,100,0	0/0:9,0:9:24.06:0,24,415	0/0:56,0:15:39.89:0,40,480	0/0:59,0:29:71.29:0,71,1039	0/0:21,0:21:60.16:0,60,1040	0/0:20,0:19:54.16:0,54,975	0/0:29,0:29:81.16:0,81,1293	0/0:59,0:58:99:0,144,2374	./.	0/0:47,0:47:99:0,138,2423	0/0:20,0:20:60.15:0,60,997	./.	./.	0/0:38,0:38:93.22:0,93,1642	0/0:49,0:49:99:0,138,2322	0/0:38,0:38:98.58:0,99,1920	0/0:40,0:40:99:0,111,1877	0/0:39,0:39:60.77:0,61,1600	0/0:19,0:17:39.28:0,39,704	0/0:17,0:17:42:0,42,680	0/0:70,0:69:99:0,192,3235	./.	./.	./.	0/0:29,0:29:84.10:0,84,1446	0/0:40,0:40:99:0,114,1955	0/0:25,0:25:62.45:0,62,1238	0/0:14,0:14:42.13:0,42,772
chr10	76179414	.	CTG	C	547.55	PASS	AC=2;AF=0.045;AN=44;BaseQRankSum=9.501;DP=804;FS=0.609;HRun=0;HaplotypeScore=124.8299;InbreedingCoeff=0.8138;MQ=55.11;MQ0=13;MQRankSum=4.330;QD=9.61;ReadPosRankSum=1.578;VQSLOD=3.0043;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:57,0:57:42.95:640,43,0	0/0:8,0:8:21.05:0,21,321	0/0:56,0:15:21.05:0,21,280	0/0:62,0:30:51.09:0,51,789	0/0:22,0:22:60.17:0,60,923	0/0:22,0:21:54.15:0,54,839	0/0:28,0:28:65.96:0,66,1045	0/0:58,2:59:44.05:0,44,1702	./.	0/0:46,0:46:99:0,117,1920	0/0:21,0:21:54.17:0,54,848	./.	./.	0/0:38,0:38:77.75:0,78,1236	0/0:49,0:49:99:0,117,1892	0/0:37,1:38:67.81:0,68,1591	0/0:41,0:41:99:0,102,1612	0/0:37,0:39:64.42:0,64,1331	0/0:18,1:17:1.59:0,2,531	0/0:17,0:17:39.13:0,39,637	0/0:70,0:69:99:0,165,2561	./.	./.	./.	0/0:30,0:30:90.29:0,90,1421	0/0:40,0:40:93.31:0,93,1511	0/0:24,1:25:28.70:0,29,977	0/0:14,0:14:39.13:0,39,643
chr10	76179541	.	C	CGT	1162.78	PASS	AB=0.893;AC=18;AF=0.346;AN=52;BaseQRankSum=-0.263;DP=642;FS=2.130;HRun=0;HaplotypeScore=116.2749;InbreedingCoeff=0.2724;MQ=58.47;MQ0=7;MQRankSum=-0.250;QD=4.60;ReadPosRankSum=-3.424;VQSLOD=2.2456;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:41:5.44:0,5,273	0/0:11,0:14:17.30:0,17,125	./.	./.	0/0:27,0:30:23.73:0,24,225	0/1:11,3:15:33.14:33,0,67	0/0:29,0:34:18.07:0,18,252	0/0:31,0:29:4.17:0,4,39	1/1:7,0:7:8.48:88,8,0	0/1:37,0:39:2.52:3,0,130	0/0:14,0:18:14.70:0,15,126	1/1:8,0:8:3.47:26,3,0	1/1:11,0:10:7.15:122,7,0	0/0:25,0:28:27.40:0,27,316	0/0:25,0:25:21.22:0,21,286	0/0:14,0:16:17.71:0,18,160	0/0:38,0:40:44.58:0,45,417	0/0:24,0:26:24.13:0,24,312	1/1:10,6:15:15.50:154,15,0	0/1:18,2:20:3.31:222,0,3	0/1:40,11:52:59.63:169,0,60	0/1:9,0:8:0:0,0,0	0/1:3,0:3:0.01:0,0,0	0/1:13,0:11:0:0,0,0	0/0:26,0:27:26.53:0,27,251	0/1:19,8:28:68.44:226,0,68	0/1:10,8:20:99:234,0,121	0/1:9,1:10:26.93:39,0,27
chr10	76180522	.	T	TTTTG	1089.43	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=2.145;DP=586;FS=8.420;HRun=0;HaplotypeScore=108.3986;InbreedingCoeff=0.1699;MQ=69.95;MQ0=2;MQRankSum=-1.445;QD=10.79;ReadPosRankSum=-1.103;VQSLOD=2.3975;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,28:35:42.14:1018,42,0	0/0:9,0:9:21.07:0,21,356	0/0:45,0:32:27.67:0,28,523	0/0:28,0:21:23.58:0,24,280	0/0:25,0:25:68.75:0,69,1021	0/0:21,0:21:63.09:0,63,860	0/0:32,0:32:56.30:0,56,952	0/0:24,0:24:59.93:0,60,780	0/1:7,0:7:24.45:24,0,31	0/0:25,0:25:37.38:0,37,852	0/0:19,0:19:55.89:0,56,700	0/1:20,0:19:44.91:45,0,84	0/0:11,0:11:9.38:0,9,115	0/0:16,0:16:16.54:0,17,653	0/0:22,0:22:62.88:0,63,847	0/0:14,0:14:39.10:0,39,607	0/0:27,0:27:71.48:0,71,1012	0/0:27,0:27:65.98:0,66,868	0/0:25,0:25:34.40:0,34,666	0/0:11,0:12:33.01:0,33,382	0/0:26,0:26:71.99:0,72,898	0/1:13,0:12:53.67:54,0,62	0/1:14,0:14:72.13:72,0,83	0/1:11,0:11:11.80:12,0,40	0/0:22,0:22:53.25:0,53,800	0/0:19,0:19:57.05:0,57,729	0/0:16,0:16:7.49:0,7,502	0/0:19,0:19:54.07:0,54,727
chr10	76180561	.	T	TTTG	290.53	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.177;DP=511;FS=2.649;HRun=0;HaplotypeScore=89.8066;InbreedingCoeff=0.8829;MQ=63.86;MQ0=2;MQRankSum=0.454;QD=29.05;ReadPosRankSum=-0.625;VQSLOD=3.4873;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:49.25:0,49,830	1/1:2,8:10:20.99:383,21,0	0/0:25,0:19:23.42:0,23,353	0/0:26,0:24:20.50:0,21,464	0/0:18,0:18:36.11:0,36,502	0/0:21,0:21:51.16:0,51,702	0/0:24,0:24:48.14:0,48,656	0/0:26,0:26:39.07:0,39,479	0/0:8,0:8:18.06:0,18,259	0/0:18,0:18:45.14:0,45,606	0/0:16,0:16:39.07:0,39,504	0/0:16,0:16:41.77:0,42,529	0/0:18,0:18:45.12:0,45,624	0/0:10,0:10:24.07:0,24,327	0/0:16,0:16:30.09:0,30,415	0/0:15,0:15:36.08:0,36,450	0/0:27,0:27:69.21:0,69,959	0/0:20,0:20:28.22:0,28,586	0/0:21,0:20:36.05:0,36,518	0/0:17,0:17:39.13:0,39,562	0/0:22,0:22:48.11:0,48,634	0/0:9,0:9:24.04:0,24,317	0/0:13,0:13:30.10:0,30,427	0/0:13,0:13:27.03:0,27,348	0/0:19,0:19:43.92:0,44,581	0/0:21,0:21:51.16:0,51,702	0/0:22,0:22:60.19:0,60,847	0/0:8,0:8:6.02:0,6,86
chr10	76180631	.	A	AC	4434.43	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-4.043;DP=485;FS=12.290;HRun=3;HaplotypeScore=48.6252;InbreedingCoeff=0.9790;MQ=91.45;MQ0=0;MQRankSum=-2.712;QD=36.65;ReadPosRankSum=2.921;VQSLOD=4.4057;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:34:84.20:1150,84,0	0/0:8,0:8:24.07:0,24,288	0/0:17,0:17:39.01:0,39,428	0/0:23,0:23:47.29:0,47,549	0/0:16,0:16:48.13:0,48,563	0/0:15,0:15:42.11:0,42,492	0/0:30,0:30:75.22:0,75,888	0/0:21,0:21:57.17:0,57,684	1/1:1,18:19:51.17:713,51,0	0/0:18,0:18:51.16:0,51,612	0/0:13,0:13:39.12:0,39,467	1/1:0,18:17:51.17:712,51,0	1/1:0,13:13:30.10:418,30,0	0/0:18,0:18:54.16:0,54,637	0/0:22,0:22:66.20:0,66,792	0/0:22,0:22:63.18:0,63,745	0/0:23,0:23:63.19:0,63,756	0/0:16,0:16:45.14:0,45,540	0/0:19,0:19:48.15:0,48,576	0/0:13,0:13:36.10:0,36,420	0/0:18,0:18:54.14:0,54,624	1/1:0,6:6:18.06:252,18,0	1/1:0,13:13:39.04:521,39,0	1/1:0,18:18:48.16:668,48,0	0/0:10,0:10:30.07:0,30,347	0/0:14,0:14:36.10:0,36,421	0/0:24,0:24:69.20:0,69,816	0/0:4,0:4:6.02:0,6,72
chr10	76180908	.	TAC	T	356.73	PASS	AB=0.939;AC=16;AF=0.308;AN=52;BaseQRankSum=3.455;DP=463;FS=11.330;HRun=0;HaplotypeScore=74.6481;InbreedingCoeff=-0.2206;MQ=56.30;MQ0=11;MQRankSum=2.012;QD=1.45;ReadPosRankSum=0.609;VQSLOD=0.6392;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:26:0:0,0,0	0/1:8,0:8:21.31:21,0,124	./.	0/0:29,0:17:0.47:0,0,1	0/1:12,0:15:5.91:6,0,44	0/1:14,3:17:48.69:49,0,163	0/0:17,0:14:20.08:0,20,257	0/0:24,0:23:21.07:0,21,298	0/1:13,0:11:2.08:2,0,13	0/1:12,2:14:39.21:39,0,289	0/0:11,0:11:20.89:0,21,265	0/0:15,0:15:10.89:0,11,133	0/0:14,0:13:3.39:0,3,108	0/1:10,0:10:63.81:85,0,64	0/1:15,0:15:6.28:6,0,283	0/0:8,0:8:15.05:0,15,196	0/1:19,1:19:64.40:64,0,253	0/0:24,0:23:48.06:0,48,603	0/1:15,1:17:29.51:30,0,112	0/1:15,1:16:85.62:86,0,106	0/1:31,1:30:52.01:52,0,509	0/0:11,0:11:7.57:0,8,72	1/1:6,1:7:2.84:14,3,0	./.	0/1:20,0:20:33.67:34,0,355	0/0:20,0:20:36.59:0,37,522	0/0:17,0:17:29.26:0,29,376	0/1:11,3:14:7.59:8,0,277
chr10	76180945	.	AT	A	593.74	PASS	AB=0.877;AC=15;AF=0.268;AN=56;BaseQRankSum=9.525;DP=568;FS=1.383;HRun=1;HaplotypeScore=90.5590;InbreedingCoeff=0.5984;MQ=47.78;MQ0=42;MQRankSum=-2.409;QD=3.91;ReadPosRankSum=-1.933;VQSLOD=-0.4735;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:26:25.90:336,26,0	0/0:10,0:10:23.81:0,24,319	0/0:27,1:3:7.76:0,8,49	0/1:28,4:5:32.63:33,0,33	0/0:18,0:18:30.03:0,30,419	0/0:26,0:24:47.80:0,48,706	0/1:22,2:20:24.07:24,0,674	0/0:27,0:22:56.30:0,56,739	1/1:5,7:10:7.82:69,8,0	0/0:19,0:19:53.58:0,54,736	0/0:15,0:14:27.07:0,27,383	1/1:11,7:18:19.22:157,19,0	0/1:7,2:8:14.34:42,0,14	0/0:15,0:13:27.89:0,28,248	0/0:14,0:14:32.42:0,32,486	0/0:13,1:13:33.11:0,33,501	0/0:22,1:22:15.26:0,15,689	0/0:29,1:29:74.44:0,74,1152	0/0:18,1:18:9.75:0,10,314	0/0:23,0:21:9.76:0,10,133	0/0:55,0:46:92.69:0,93,1255	1/1:5,4:7:8.73:49,9,0	1/1:4,5:9:3.19:15,3,0	1/1:5,4:7:4.19:44,4,0	0/0:13,0:13:35.78:0,36,484	0/0:26,0:25:67.57:0,68,968	0/0:18,2:20:10.19:0,10,324	0/0:20,1:20:12.51:0,13,649
chr10	76180946	.	TCACA	T	981.81	PASS	AB=0.827;AC=13;AF=0.241;AN=54;BaseQRankSum=5.959;DP=575;FS=2.642;HRun=0;HaplotypeScore=112.7099;InbreedingCoeff=0.5789;MQ=48.66;MQ0=43;MQRankSum=-0.790;QD=7.06;ReadPosRankSum=1.949;VQSLOD=2.6939;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:28:0:0,0,0	0/0:10,0:10:18.06:0,18,423	0/0:28,0:3:3.01:0,3,48	0/0:36,0:7:15.04:0,15,217	0/0:17,0:17:27.09:0,27,624	0/0:27,0:25:42.14:0,42,980	0/0:24,0:20:41.61:0,42,840	0/0:28,0:24:35.77:0,36,574	1/1:8,0:11:3:28,3,0	0/0:18,0:19:29.79:0,30,574	0/0:15,0:14:8.52:0,9,154	1/1:11,0:18:2.83:28,3,0	0/1:3,0:5:6.39:22,0,6	0/0:15,0:13:26.76:0,27,400	0/0:14,0:14:23.84:0,24,397	0/0:13,0:12:24.07:0,24,535	0/0:23,0:22:48.15:0,48,1035	0/0:28,1:28:4.42:0,4,1087	0/1:12,7:18:27.15:368,0,27	1/1:11,11:21:18.58:269,19,0	0/0:45,0:46:77.50:0,78,1440	./.	1/1:5,0:9:2.98:22,3,0	0/0:6,0:7:0:0,0,0	0/0:14,0:14:12.04:0,12,195	0/0:24,0:25:32.83:0,33,613	1/1:10,9:19:27.07:397,27,0	0/0:21,0:20:36.11:0,36,826
chr10	76180996	.	CCAGTGCACACATATAACCAACA	C	4626.60	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.109;DP=456;FS=0.000;HRun=0;HaplotypeScore=255.5706;InbreedingCoeff=0.9160;MQ=80.17;MQ0=0;MQRankSum=-9.170;QD=77.11;ReadPosRankSum=-1.502;VQSLOD=3.8089;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,9:14:21.97:1078,22,0	0/0:7,0:7:21.07:0,21,2050	0/0:24,0:21:60.15:0,60,3416	0/0:45,0:40:99:0,102,6149	0/0:17,0:17:45.15:0,45,4027	0/0:22,0:22:66.21:0,66,6029	0/0:20,0:20:57.18:0,57,5056	0/0:25,0:25:60.21:0,60,4779	1/1:2,8:10:24.08:1326,24,0	0/0:16,0:16:45.15:0,45,4388	0/0:11,0:11:33.10:0,33,3104	1/1:3,4:7:12.04:482,12,0	1/1:2,2:4:6.02:248,6,0	0/0:15,0:15:45.15:0,45,4656	0/0:15,0:15:42.14:0,42,4255	0/0:15,0:15:42.14:0,42,4054	0/0:20,0:20:60.21:0,60,5404	0/0:21,0:21:57.20:0,57,4486	0/0:17,0:17:51.17:0,51,3441	0/0:27,0:27:72.25:0,72,6925	0/0:36,0:35:90.31:0,90,7946	1/1:2,1:3:3.01:117,3,0	1/1:4,9:13:24.05:1066,24,0	1/1:2,5:7:5.99:310,6,0	0/0:5,0:5:15.05:0,15,1204	0/0:16,0:16:48.16:0,48,4283	0/0:13,0:13:36.12:0,36,2580	0/0:9,0:9:27.09:0,27,2680
chr10	76181255	.	G	GTGTC	7797.58	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.092;DP=643;FS=8.257;HRun=0;HaplotypeScore=118.5652;InbreedingCoeff=0.9950;MQ=93.48;MQ0=0;MQRankSum=-11.226;QD=56.92;ReadPosRankSum=1.897;VQSLOD=5.9894;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,22:29:60.21:1585,60,0	0/0:10,0:10:30.10:0,30,560	0/0:35,0:35:93.32:0,93,1681	0/0:26,0:26:60.21:0,60,1092	0/0:26,0:26:69.24:0,69,1287	0/0:25,0:25:75.25:0,75,1369	0/0:22,0:22:66.23:0,66,1231	0/0:30,0:30:81.26:0,81,1427	1/1:7,17:24:69.24:1836,69,0	0/0:21,0:21:60.21:0,60,1099	0/0:15,0:15:42.14:0,42,780	1/1:7,17:24:57.20:1515,57,0	1/1:5,14:19:39.13:1037,39,0	0/0:29,0:29:87.30:0,87,1610	0/0:24,0:24:69.24:0,69,1288	0/0:24,0:24:69.24:0,69,1288	0/0:43,0:43:99:0,120,2141	0/0:16,0:16:48.16:0,48,892	0/0:24,0:24:66.22:0,66,1202	0/0:24,0:24:63.22:0,63,1175	0/0:33,0:33:99:0,99,1832	1/1:5,12:17:33.11:876,33,0	1/1:4,6:10:15.52:400,16,0	1/1:1,13:14:21.07:549,21,0	0/0:23,0:23:66.21:0,66,1201	0/0:23,0:23:66.22:0,66,1202	0/0:25,0:25:72.23:0,72,1304	0/0:8,0:8:18.06:0,18,336
chr10	76181712	.	A	ACACACACATGCACACACATG	656.24	PASS	AB=0.830;AC=10;AF=0.185;AN=54;BaseQRankSum=2.736;DP=915;FS=10.517;HRun=0;HaplotypeScore=444.1861;InbreedingCoeff=0.7535;MQ=60.73;MQ0=1;MQRankSum=-2.933;QD=4.35;ReadPosRankSum=-2.411;VQSLOD=0.4883;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,9:25:2.50:9,2,0	0/0:17,0:17:48.16:0,48,2326	0/0:28,0:23:17.69:0,18,1137	0/0:32,0:26:43.75:0,44,978	0/0:28,0:28:78.25:0,78,3715	0/0:29,0:29:81.25:0,81,3724	0/0:41,0:41:99:0,102,4199	0/0:41,0:41:96.30:0,96,3161	./.	0/0:49,0:49:99:0,138,6026	0/0:28,0:28:75.23:0,75,3193	1/1:13,8:30:5.79:380,6,0	1/1:9,10:22:6.02:343,6,0	0/0:50,0:50:99:0,107,6568	0/0:63,0:63:99:0,159,7148	0/0:51,0:51:99:0,135,6419	0/0:24,0:24:66.19:0,66,2664	0/0:19,0:19:42.97:0,43,1639	0/0:20,0:20:45.15:0,45,1781	0/0:44,0:43:99:0,111,5056	0/0:49,0:49:99:0,126,5813	0/1:24,6:30:0.60:1,0,1	0/1:19,5:24:0.20:0,0,0	1/1:19,1:20:3.01:44,3,0	0/0:41,0:41:99:0,106,4313	0/0:41,0:41:99:0,108,4940	0/0:37,0:37:99:0,102,4829	0/0:8,0:8:21.54:0,22,590
chr10	76181761	.	C	CACATATACACAT	415.75	PASS	AB=0.728;AC=11;AF=0.196;AN=56;BaseQRankSum=5.316;DP=977;FS=4.971;HRun=0;HaplotypeScore=321.7157;InbreedingCoeff=0.6405;MQ=56.07;MQ0=8;MQRankSum=-5.142;QD=2.97;ReadPosRankSum=-2.336;VQSLOD=1.1263;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,1:10:2.75:45,3,0	0/0:13,0:12:36.12:0,36,1283	0/0:41,0:25:58.61:0,59,1403	0/0:46,0:28:56.67:0,57,1275	0/0:30,0:30:84.24:0,84,2506	0/0:33,0:33:90.31:0,90,3055	0/0:48,0:48:99:0,129,4225	0/0:69,0:68:99:0,181,5112	0/1:4,10:18:0:1,0,0	0/0:69,0:69:99:0,208,6699	0/0:23,0:23:63.19:0,63,1913	1/1:13,11:25:2.89:165,3,0	1/1:7,2:11:11.91:317,12,0	0/0:62,0:62:99:0,177,5524	0/0:66,0:66:99:0,193,6032	0/0:54,0:54:99:0,160,5294	0/0:22,0:22:54.06:0,54,1829	0/1:19,0:19:8.20:8,0,1428	0/0:29,0:28:75.21:0,75,2242	0/0:31,0:31:81.26:0,81,2661	0/0:73,0:73:99:0,189,5930	0/1:10,11:23:0:1,0,0	0/1:14,5:22:0.21:0,0,0	0/1:7,3:11:0:0,0,0	0/0:40,0:40:99:0,108,3806	0/0:51,0:51:99:0,141,4337	0/0:27,0:27:78.15:0,78,2174	0/0:10,0:10:30.10:0,30,897
chr10	76181763	.	C	CATAT	203.47	PASS	AB=0.904;AC=10;AF=0.179;AN=56;BaseQRankSum=5.089;DP=976;FS=21.434;HRun=0;HaplotypeScore=179.2653;InbreedingCoeff=0.7388;MQ=54.91;MQ0=9;MQRankSum=-3.780;QD=1.80;ReadPosRankSum=-2.485;VQSLOD=0.7898;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,2:10:2.99:24,3,0	0/0:13,0:12:36.12:0,36,719	0/0:41,0:25:64.77:0,65,1196	0/0:44,0:27:50.80:0,51,1098	0/0:29,0:29:87.26:0,87,1629	0/0:31,0:31:90.31:0,90,1783	0/0:49,0:49:99:0,132,2562	0/0:68,0:67:99:0,182,3471	1/1:19,0:19:2.61:17,3,0	0/0:70,0:70:99:0,211,4137	0/0:23,0:23:63.20:0,63,1212	1/1:26,0:26:2.97:42,3,0	1/1:10,1:11:12.02:244,12,0	0/0:64,0:64:99:0,183,3417	0/0:65,0:65:99:0,196,3806	0/0:54,0:54:99:0,163,3152	0/0:21,0:21:53.76:0,54,1061	0/0:18,0:19:56.86:0,57,1013	0/0:30,0:28:75.26:0,75,1468	0/0:30,0:30:84.27:0,84,1630	0/0:75,0:75:99:0,205,3774	0/1:21,2:24:0.21:0,0,1	0/1:21,1:23:0.18:0,0,0	0/0:11,0:10:0:0,0,0	0/0:39,0:39:99:0,108,2155	0/0:50,0:50:99:0,147,2783	0/0:27,0:27:81.24:0,81,1487	0/0:10,0:10:30.10:0,30,579
chr10	76181793	.	T	TAC	415.65	PASS	AB=0.667;AC=9;AF=0.161;AN=56;BaseQRankSum=6.762;DP=1012;FS=15.991;HRun=0;HaplotypeScore=177.1959;InbreedingCoeff=0.7446;MQ=55.38;MQ0=6;MQRankSum=-5.799;QD=4.08;ReadPosRankSum=-1.373;VQSLOD=1.6111;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:3,3:6:3.07:0,3,28	0/0:19,0:18:51.16:0,51,750	0/0:40,0:26:75.24:0,75,1090	0/0:49,0:27:68.52:0,69,885	0/0:27,0:27:81.26:0,81,1213	0/0:34,0:33:99:0,100,1458	0/0:41,0:41:99:0,111,1610	0/0:54,0:54:99:0,147,2158	1/1:8,15:23:10.91:179,11,0	0/0:83,0:83:99:0,241,3567	0/0:22,0:22:66.21:0,66,980	1/1:6,22:28:0.06:1,0,0	1/1:1,9:10:18.51:347,19,0	0/0:66,0:66:99:0,184,2716	0/0:70,0:70:99:0,204,3016	0/0:61,0:61:99:0,184,2722	0/0:22,0:23:57.10:0,57,817	0/0:27,0:27:64.64:0,65,1021	0/0:21,0:18:50.70:0,51,750	0/0:31,0:31:93.32:0,93,1405	0/0:80,0:79:99:0,223,3290	1/1:11,20:31:1.26:6,1,0	0/0:5,15:20:0.17:0,0,2	0/1:5,5:10:0.02:1,0,0	0/0:44,0:44:99:0,126,1810	0/0:51,0:51:99:0,129,2140	0/0:29,0:29:84.27:0,84,1256	0/0:11,0:11:33.07:0,33,479
chr10	76181836	.	T	TGC	115.43	PASS	AB=0.590;AC=9;AF=0.161;AN=56;BaseQRankSum=6.379;DP=1148;FS=2.239;HRun=0;HaplotypeScore=209.2143;InbreedingCoeff=0.7025;MQ=55.47;MQ0=4;MQRankSum=-5.456;QD=1.06;ReadPosRankSum=-3.891;VQSLOD=1.9575;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,4:9:5.74:0,6,57	0/0:18,0:17:54.15:0,54,829	0/0:41,0:26:65.93:0,66,994	0/0:55,0:37:76.90:0,77,1282	0/0:34,0:34:99:0,102,1613	0/0:32,0:31:96.33:0,96,1563	0/0:41,0:41:99:0,111,1737	0/0:63,0:63:99:0,184,2756	0/1:6,14:21:0.09:0,0,0	0/0:89,0:89:99:0,259,3988	0/0:21,0:21:60.16:0,60,905	1/1:3,17:20:5.11:79,5,0	1/1:2,13:15:11.64:138,12,0	0/0:70,0:70:99:0,199,2960	0/0:75,0:75:99:0,222,3324	0/0:83,0:83:99:0,244,3653	0/0:25,0:25:49.20:0,49,970	0/0:37,0:38:42.70:0,43,1377	0/0:21,0:21:62.86:0,63,927	0/0:39,0:39:99:0,111,1705	0/0:108,0:107:99:0,298,4586	0/1:4,21:26:1.15:1,0,2	0/1:5,10:16:0:0,0,2	1/1:8,3:11:0.94:6,1,0	0/0:38,0:38:99:0,102,1468	0/0:71,0:71:99:0,208,3178	0/0:43,0:43:99:0,129,1967	0/0:24,0:24:69.24:0,69,1124
chr10	76182160	.	T	TAC	1261.33	PASS	AB=0.680;AC=13;AF=0.232;AN=56;BaseQRankSum=9.485;DP=937;FS=25.981;HRun=0;HaplotypeScore=196.4761;InbreedingCoeff=0.8772;MQ=54.55;MQ0=6;MQRankSum=-4.573;QD=7.13;ReadPosRankSum=-2.693;VQSLOD=1.4853;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,10:19:3.01:53,3,0	0/0:21,0:21:57.15:0,57,746	0/0:41,0:24:53.20:0,53,703	0/0:57,0:34:70.87:0,71,873	0/0:25,0:25:75.25:0,75,1028	0/0:25,0:24:54.10:0,54,732	0/0:26,0:26:66.20:0,66,886	0/0:45,0:45:99:0,129,1736	1/1:9,15:23:9.03:159,9,0	0/0:57,0:57:99:0,156,2035	0/0:20,0:20:54.08:0,54,727	1/1:13,25:36:8.66:256,9,0	1/1:8,23:31:43.70:733,44,0	0/0:50,0:50:99:0,104,1470	0/0:43,0:43:99:0,111,1451	0/0:51,1:53:99:0,115,1728	0/0:19,0:19:51.17:0,51,694	0/0:23,0:23:50.89:0,51,692	0/0:16,0:16:45.14:0,45,598	0/0:36,0:36:96.31:0,96,1300	0/0:80,0:80:99:0,202,2700	1/1:8,16:24:6.02:101,6,0	0/1:9,8:17:0:0,0,0	1/1:11,12:23:11.26:124,11,0	0/0:32,0:32:72.96:0,73,1045	0/0:44,0:44:99:0,114,1513	0/0:28,0:28:78.24:0,78,1048	0/0:15,0:15:42.13:0,42,562
chr10	76182192	.	C	CATGCATACAT	461.85	PASS	AB=0.967;AC=8;AF=0.143;AN=56;BaseQRankSum=6.598;DP=922;FS=7.579;HRun=0;HaplotypeScore=303.5355;InbreedingCoeff=0.5279;MQ=50.78;MQ0=12;MQRankSum=-5.387;QD=2.59;ReadPosRankSum=-2.755;VQSLOD=0.6529;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,1:23:4.50:0,4,41	0/0:15,0:15:42.13:0,42,1198	0/0:35,0:6:15.04:0,15,330	0/0:45,0:17:33.04:0,33,690	0/0:21,0:21:63.20:0,63,1804	0/0:25,0:25:51.22:0,51,1665	0/0:38,0:38:95.35:0,95,2502	0/0:48,0:47:99:0,115,3280	0/1:29,1:28:30.92:83,0,31	0/0:59,0:59:99:0,171,4633	0/0:20,0:20:50.86:0,51,1544	0/1:41,3:43:10.25:10,0,16	1/1:23,2:26:11.83:356,12,0	0/0:34,0:34:90.30:0,90,2700	0/0:39,0:39:99:0,117,3401	0/0:48,1:49:99:0,135,4023	0/0:18,0:18:47.83:0,48,1231	0/0:23,0:23:66.03:0,66,1939	0/0:22,0:21:53.46:0,53,875	0/0:34,0:34:96.30:0,96,2723	0/0:101,0:100:99:0,221,6736	0/1:26,0:26:0.10:0,0,0	0/1:24,0:24:0:0,0,0	1/1:25,1:26:4.85:132,5,0	0/0:28,0:28:63:0,63,1815	0/0:35,0:34:99:0,99,2722	0/0:28,0:28:80.31:0,80,2296	0/0:4,0:4:12.04:0,12,373
chr10	76182193	.	A	ATG	61.16	PASS	AB=0.796;AC=5;AF=0.089;AN=56;BaseQRankSum=4.488;DP=907;FS=4.689;HRun=0;HaplotypeScore=185.7447;InbreedingCoeff=0.1876;MQ=50.98;MQ0=12;MQRankSum=-3.507;QD=0.49;ReadPosRankSum=-1.300;VQSLOD=1.8018;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,1:23:2.38:0,2,19	0/0:15,0:15:42.12:0,42,623	0/0:35,0:6:15.05:0,15,232	0/0:44,0:16:36.03:0,36,495	0/0:22,0:22:60.56:0,61,887	0/0:25,0:25:65.78:0,66,951	0/0:37,0:37:99:0,99,1422	0/0:48,0:47:99:0,134,1896	0/1:17,11:26:25.97:26,0,77	0/0:58,0:58:99:0,171,2562	0/0:20,0:20:51.02:0,51,757	0/0:38,5:40:13.86:0,14,133	0/1:20,5:25:99:122,0,103	0/0:33,0:33:90.14:0,90,1330	0/0:40,0:40:99:0,117,1675	0/0:50,0:50:99:0,141,2031	0/0:19,0:19:40.32:0,40,618	0/0:23,0:23:65.97:0,66,969	0/0:21,0:20:51.48:0,51,569	0/0:33,0:33:94.80:0,95,1379	0/0:99,0:98:99:0,198,3590	0/1:20,5:25:0.07:0,0,0	0/1:15,8:23:0:0,0,0	0/1:19,4:23:0.93:1,0,52	0/0:27,0:27:63.08:0,63,882	0/0:36,0:35:99:0,101,1459	0/0:27,1:28:63.59:0,64,1127	0/0:4,0:4:12:0,12,164
chr10	76182221	.	ACAC	A	34.87	PASS	AB=0.958;AC=9;AF=0.161;AN=56;BaseQRankSum=10.315;DP=913;FS=9.427;HRun=0;HaplotypeScore=203.0674;InbreedingCoeff=0.4624;MQ=60.33;MQ0=5;MQRankSum=-0.649;QD=0.19;ReadPosRankSum=-2.168;VQSLOD=1.3753;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:10.91:36,11,0	0/0:16,0:16:39.43:0,39,735	0/0:34,0:19:54.04:0,54,733	0/0:31,0:26:75.17:0,75,1031	0/0:25,0:25:72.22:0,72,1312	0/0:30,0:30:73.70:0,74,1267	0/0:29,0:29:80.77:0,81,1543	0/0:44,0:44:99:0,125,1800	0/1:38,0:38:52.51:53,0,100	0/0:61,0:60:99:0,174,3204	0/0:22,0:22:43.25:0,43,971	0/1:37,4:40:40.88:41,0,93	0/0:22,2:24:0.36:0,0,165	0/0:34,0:34:85.79:0,86,1630	0/0:42,0:42:99:0,118,2147	0/0:45,0:45:99:0,119,2441	0/0:19,0:19:47.65:0,48,772	0/0:26,0:26:69.07:0,69,1443	0/0:27,0:26:68.91:0,69,919	0/0:26,0:26:71.18:0,71,1497	0/0:95,0:95:99:0,242,4485	1/1:24,1:25:4.67:16,5,0	1/1:27,0:27:4.74:16,5,0	0/1:26,1:27:9.55:10,0,57	0/0:25,0:25:48.86:0,49,1063	0/0:43,0:42:99:0,123,2071	0/0:26,0:26:70.95:0,71,1329	0/0:8,0:8:17.17:0,17,365
chr10	76182226	.	C	CACAG	1282.42	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.458;DP=861;FS=28.025;HRun=0;HaplotypeScore=218.0831;InbreedingCoeff=0.9615;MQ=67.23;MQ0=4;MQRankSum=-0.923;QD=6.14;ReadPosRankSum=-2.298;VQSLOD=1.2903;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:24:23.85:209,24,0	0/0:13,0:13:26.88:0,27,526	0/0:34,0:20:60.19:0,60,1119	0/0:37,0:32:68.11:0,68,1411	0/0:22,0:22:63.22:0,63,1198	0/0:27,0:27:68.91:0,69,1339	0/0:31,0:31:84.23:0,84,1559	0/0:37,0:37:99:0,99,1894	1/1:37,0:38:39.74:408,40,0	0/0:58,0:57:99:0,163,3000	0/0:19,0:19:48.07:0,48,934	1/1:38,3:42:35.88:358,36,0	1/1:23,2:25:23.75:177,24,0	0/0:29,0:29:81.26:0,81,1511	0/0:40,0:40:99:0,120,2244	0/0:42,1:43:99:0,117,2272	0/0:16,0:16:15.85:0,16,785	0/0:25,0:25:60.13:0,60,1104	0/0:21,0:20:57.10:0,57,987	0/0:24,0:24:69.20:0,69,1221	0/0:88,0:88:99:0,220,4088	1/1:27,0:27:5.34:74,5,0	1/1:28,0:28:8.92:100,9,0	1/1:24,1:25:18.43:147,18,0	0/0:24,0:24:63.11:0,63,1169	0/0:32,0:32:96.33:0,96,1870	0/0:25,0:25:75.26:0,75,1413	0/0:7,0:7:21.07:0,21,416
chr10	76182587	.	GT	G	4662.57	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.022;DP=665;FS=8.333;HRun=1;HaplotypeScore=94.6618;InbreedingCoeff=0.9895;MQ=87.27;MQ0=0;MQRankSum=-11.475;QD=33.07;ReadPosRankSum=1.706;VQSLOD=4.0312;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:75.25:1047,75,0	0/0:9,0:9:27.09:0,27,431	0/0:28,1:29:62.22:0,62,1239	0/0:38,0:37:88.45:0,88,1487	0/0:17,0:17:51.17:0,51,815	0/0:20,0:20:57.19:0,57,901	0/0:37,0:37:99:0,108,1726	0/0:28,0:28:81.28:0,81,1295	1/1:3,14:17:17.14:520,17,0	0/0:34,0:34:99:0,102,1628	0/0:6,0:6:15.05:0,15,240	1/1:0,17:17:45.15:628,45,0	1/1:0,22:22:57.19:792,57,0	0/0:31,0:31:90.31:0,90,1438	0/0:30,0:30:90.31:0,90,1437	0/0:23,0:23:69.22:0,69,1080	0/0:23,0:23:69.24:0,69,1098	0/0:22,0:22:66.21:0,66,1017	0/0:27,0:27:81.26:0,81,1255	0/0:27,0:27:78.27:0,78,1247	0/0:44,0:44:99:0,132,2105	1/1:0,17:17:42.14:586,42,0	1/1:0,14:14:33.11:461,33,0	1/1:0,26:26:45.15:628,45,0	0/0:21,0:21:57.19:0,57,902	0/0:33,0:33:99:0,99,1558	0/0:21,0:21:63.21:0,63,1007	0/0:4,0:4:12.04:0,12,192
chr10	76182617	.	G	GAC	507.86	PASS	AB=0.787;AC=6;AF=0.107;AN=56;BaseQRankSum=7.134;DP=623;FS=45.900;HRun=0;HaplotypeScore=128.7857;InbreedingCoeff=-0.1197;MQ=68.95;MQ0=2;MQRankSum=-6.320;QD=4.93;ReadPosRankSum=0.514;VQSLOD=1.2518;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:88.41:88,0,149	0/0:10,0:10:30.10:0,30,459	0/0:30,0:27:72.21:0,72,1026	0/0:34,0:32:75.39:0,75,1244	0/0:17,0:17:45.15:0,45,687	0/0:21,0:21:60.14:0,60,850	0/0:38,1:39:99:0,111,1653	0/0:18,0:18:54.18:0,54,823	0/1:6,6:12:29.73:175,0,30	0/0:20,0:20:60.20:0,60,898	0/0:10,0:10:24.07:0,24,367	0/0:10,4:15:18:0,18,219	0/1:9,2:16:51.56:233,0,52	0/0:28,0:28:84.24:0,84,1215	0/0:30,0:30:90.29:0,90,1350	0/0:28,0:28:84.29:0,84,1279	0/0:24,0:24:69.21:0,69,1032	0/0:21,0:21:63.21:0,63,964	0/0:17,0:17:51.17:0,51,778	0/0:25,0:25:66.21:0,66,984	0/0:58,0:58:99:0,169,2490	0/1:14,6:21:14.93:15,0,98	0/1:6,2:9:39.28:39,0,90	0/1:20,3:24:81.85:82,0,172	0/0:19,0:19:51.17:0,51,779	0/0:30,0:30:84.27:0,84,1239	0/0:20,0:20:60.19:0,60,893	0/0:6,0:6:18.06:0,18,275
chr10	76182795	.	T	TG	5944.61	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.148;DP=620;FS=9.080;HRun=0;HaplotypeScore=65.5581;InbreedingCoeff=0.9999;MQ=83.97;MQ0=0;MQRankSum=-8.249;QD=43.39;ReadPosRankSum=4.146;VQSLOD=4.9696;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:66.14:1021,66,0	0/0:11,0:11:33.11:0,33,459	0/0:20,0:20:57.18:0,57,770	0/0:30,0:30:84.21:0,84,1084	0/0:20,0:20:57.19:0,57,797	0/0:16,0:16:48.10:0,48,590	0/0:26,0:26:78.23:0,78,1053	0/0:31,0:31:90.29:0,90,1239	1/1:0,18:18:54.18:860,54,0	0/0:32,0:32:96.31:0,96,1304	0/0:17,0:17:51.16:0,51,695	1/1:0,20:20:57.19:908,57,0	1/1:1,17:18:48.16:766,48,0	0/0:20,0:20:60.20:0,60,839	0/0:33,0:33:99:0,99,1385	0/0:29,0:29:87.28:0,87,1200	0/0:27,0:27:81.26:0,81,1114	0/0:21,0:21:60.16:0,60,817	0/0:24,0:24:72.24:0,72,994	0/0:17,0:17:51.17:0,51,713	0/0:20,0:20:57.18:0,57,779	1/1:0,20:20:60.20:955,60,0	1/1:0,13:13:33.11:527,33,0	1/1:0,22:22:57.19:908,57,0	0/0:21,0:21:63.20:0,63,853	0/0:27,0:27:78.25:0,78,1077	0/0:24,0:24:66.19:0,66,876	0/0:17,0:17:45.15:0,45,629
chr10	76183061	.	T	TG	6449.68	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=17.568;DP=671;FS=2.917;HRun=2;HaplotypeScore=103.7903;InbreedingCoeff=0.9810;MQ=79.88;MQ0=0;MQRankSum=-2.836;QD=37.50;ReadPosRankSum=3.268;VQSLOD=4.9813;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,40:41:99:1510,105,0	0/0:2,0:2:6.02:0,6,74	0/0:24,0:24:69.21:0,69,842	0/0:19,0:19:56.66:0,57,669	0/0:19,0:19:57.18:0,57,706	0/0:15,0:15:45.13:0,45,545	0/0:29,0:29:84.25:0,84,1028	0/0:24,0:24:66.20:0,66,808	1/1:2,23:25:63.21:907,63,0	0/0:32,0:31:93.27:0,93,1130	0/0:13,0:13:39.11:0,39,470	1/1:2,28:30:78.22:1099,78,0	1/1:1,14:15:42.14:604,42,0	0/0:25,0:25:63.20:0,63,781	0/0:34,0:34:99:0,102,1251	0/0:33,1:34:53.10:0,53,1109	0/0:31,0:31:87.23:0,87,1050	0/0:18,0:18:51.12:0,51,615	0/0:22,0:22:66.21:0,66,817	0/0:22,0:22:62.90:0,63,780	0/0:56,0:56:99:0,159,1913	1/1:2,19:21:51.17:732,51,0	1/1:1,13:14:36.12:518,36,0	1/1:1,25:26:75.25:1079,75,0	0/0:19,0:19:54.17:0,54,670	0/0:23,0:23:63.18:0,63,758	0/0:24,0:24:72.23:0,72,893	0/0:14,0:14:30.09:0,30,372
chr10	76183486	.	T	TG	8814.18	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.636;DP=761;FS=3.844;HRun=3;HaplotypeScore=98.1891;InbreedingCoeff=0.9942;MQ=87.62;MQ0=0;MQRankSum=-3.805;QD=37.51;ReadPosRankSum=1.542;VQSLOD=4.9406;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,54:59:99:2120,153,0	0/0:10,0:10:30.09:0,30,360	0/0:29,0:29:75.20:0,75,863	0/0:24,0:24:56.12:0,56,654	0/0:28,0:28:78.22:0,78,924	0/0:22,0:22:66.20:0,66,792	0/0:32,0:32:93.29:0,93,1116	0/0:29,0:29:84.25:0,84,1000	1/1:1,30:31:84.28:1176,84,0	0/0:30,0:30:84.26:0,84,1008	0/0:11,0:11:33.10:0,33,394	1/1:3,24:27:69.23:966,69,0	1/1:1,30:31:84.28:1174,84,0	0/0:25,0:25:75.23:0,75,900	0/0:25,0:25:75.23:0,75,900	0/0:24,1:25:33.21:0,33,822	0/0:44,0:44:99:0,129,1534	0/0:22,0:22:63.17:0,63,742	0/0:27,0:27:78.21:0,78,913	0/0:24,0:24:69.21:0,69,824	0/0:42,0:42:99:0,117,1380	1/1:1,26:27:78.26:1091,78,0	1/1:0,21:21:60.16:817,60,0	1/1:1,38:39:99:1470,105,0	0/0:20,0:20:57.17:0,57,684	0/0:30,0:30:84.25:0,84,997	0/0:22,0:22:60.15:0,60,685	0/0:5,0:5:12.04:0,12,144
chr10	76184502	.	CT	C	105.54	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.080;DP=687;FS=19.512;HRun=3;HaplotypeScore=84.4401;InbreedingCoeff=0.9984;MQ=85.04;MQ0=0;MQRankSum=-4.416;QD=6.60;ReadPosRankSum=-1.061;VQSLOD=-0.5610;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:29.54:200,30,0	0/0:10,0:10:30.07:0,30,410	0/0:26,0:26:64.87:0,65,941	0/0:25,0:25:61.02:0,61,799	0/0:33,0:33:96.31:0,96,1362	0/0:28,0:28:81.25:0,81,1127	0/0:18,0:18:51.17:0,51,734	0/0:27,0:27:81.26:0,81,1135	0/0:10,0:10:30.08:0,30,411	0/0:36,0:36:99:0,105,1497	0/0:29,0:29:81.19:0,81,1106	0/0:23,0:23:69.23:0,69,988	0/0:21,0:21:63.19:0,63,872	0/0:22,0:22:63.20:0,63,890	0/0:23,0:23:66.21:0,66,932	0/0:24,0:24:69.23:0,69,992	0/0:33,0:33:96.25:0,96,1309	0/0:31,0:30:87.27:0,87,1221	0/0:17,0:17:51.13:0,51,707	0/0:31,0:31:93.29:0,93,1303	0/0:22,0:22:60.19:0,60,845	0/0:22,0:22:66.21:0,66,930	0/0:27,0:27:75.24:0,75,1058	0/0:36,0:36:99:0,105,1511	0/0:19,0:19:57.19:0,57,820	0/0:29,0:29:87.29:0,87,1237	0/0:33,0:33:96.29:0,96,1329	0/0:16,0:16:42.14:0,42,602
chr10	76185143	.	G	GCAAA	12116.21	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=19.009;DP=732;FS=4.181;HRun=0;HaplotypeScore=175.2246;InbreedingCoeff=0.9995;MQ=74.95;MQ0=0;MQRankSum=-19.408;QD=59.10;ReadPosRankSum=-3.659;VQSLOD=5.1302;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,23:36:87.12:1788,87,0	0/0:8,0:8:24.08:0,24,479	0/0:19,0:19:54.18:0,54,1037	0/0:21,0:22:47.43:0,47,886	0/0:30,0:30:84.29:0,84,1678	0/0:17,0:17:51.16:0,51,983	0/0:24,0:24:69.24:0,69,1378	0/0:25,0:25:69.21:0,69,1277	1/1:2,19:21:60.21:1647,60,0	0/0:26,0:26:75.26:0,75,1497	0/0:20,0:20:60.21:0,60,1198	1/1:5,24:29:87.30:2351,87,0	1/1:5,17:23:69.21:1769,69,0	0/0:35,0:35:99:0,105,2026	0/0:23,0:23:69.24:0,69,1378	0/0:36,0:36:99:0,105,2052	0/0:25,0:25:69.22:0,69,1341	0/0:18,0:18:54.19:0,54,1077	0/0:31,0:31:87.29:0,87,1702	0/0:25,0:25:75.24:0,75,1449	0/0:50,0:50:99:0,144,2848	1/1:6,30:37:96.15:1957,96,0	1/1:4,23:30:78.22:1618,78,0	1/1:10,18:29:44.89:986,45,0	0/0:25,0:25:75.26:0,75,1498	0/0:29,0:29:81.28:0,81,1612	0/0:29,0:28:84.27:0,84,1639	0/0:10,0:10:30.10:0,30,599
chr10	76188165	.	T	TGCCCGTG	15051.88	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=0.057;DP=733;FS=1.123;HRun=0;HaplotypeScore=178.5901;InbreedingCoeff=0.9994;MQ=86.92;MQ0=2;MQRankSum=-17.560;QD=80.06;ReadPosRankSum=0.937;VQSLOD=5.1864;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,26:42:83.95:3052,84,0	0/0:14,0:14:42.13:0,42,993	0/0:21,0:21:50.84:0,51,1192	0/0:35,0:35:97.85:0,98,2208	0/0:25,0:25:66.23:0,66,1725	0/0:29,0:29:87.27:0,87,2138	0/0:28,0:28:72.33:0,72,1920	0/0:28,0:28:78.25:0,78,1912	1/1:3,17:22:60.21:2293,60,0	0/0:29,0:29:78.27:0,78,2019	0/0:19,0:19:51.17:0,51,1330	1/1:10,27:40:99:4146,108,0	1/1:2,22:26:63.22:2489,63,0	0/0:20,0:20:60.21:0,60,1536	0/0:18,0:18:51.16:0,51,1286	0/0:28,0:28:81.28:0,81,2069	0/0:44,0:44:99:0,129,3358	0/0:29,0:29:87.30:0,87,2253	0/0:25,0:25:75.26:0,75,1925	0/0:21,0:21:60.19:0,60,1512	0/0:41,0:41:99:0,117,3055	1/1:3,13:18:30.10:1139,30,0	1/1:5,10:18:23.95:863,24,0	1/1:6,10:19:30.10:1069,30,0	0/0:19,0:19:54.13:0,54,1336	0/0:32,0:32:87.28:0,87,2187	0/0:23,0:23:66.23:0,66,1741	0/0:17,0:17:51.18:0,51,1344
chr10	76188370	.	T	TTTTTTG	4521.82	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-2.155;DP=611;FS=2.361;HRun=0;HaplotypeScore=125.8705;InbreedingCoeff=0.8856;MQ=69.80;MQ0=5;MQRankSum=-7.828;QD=29.36;ReadPosRankSum=1.035;VQSLOD=4.7999;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,15:21:36.11:1105,36,0	0/0:18,0:18:48.07:0,48,744	0/0:31,0:15:4.61:0,5,201	0/1:33,0:21:7.07:7,0,170	0/0:30,0:30:75.23:0,75,1447	0/0:19,0:19:51.14:0,51,940	0/0:21,0:21:57.11:0,57,964	0/0:44,0:44:99:0,102,1681	1/1:6,15:22:30.06:821,30,0	0/0:39,0:39:95.33:0,95,1778	0/0:18,0:18:24.61:0,25,575	1/1:6,13:19:29.68:884,30,0	1/1:6,11:20:18.04:577,18,0	0/0:14,0:14:30.09:0,30,558	0/0:27,0:27:75.20:0,75,1301	0/0:16,0:16:42.13:0,42,801	0/0:19,0:19:51.10:0,51,941	0/0:15,0:15:45.13:0,45,778	0/0:24,0:24:57.15:0,57,890	0/0:16,0:16:42.10:0,42,782	0/0:12,0:12:21.07:0,21,440	1/1:3,10:14:20.97:463,21,0	1/1:4,13:18:20.85:566,21,0	1/1:6,1:7:8.90:99,9,0	0/0:16,0:16:45.12:0,45,765	0/0:26,0:26:63.21:0,63,1226	0/0:42,0:41:99:0,108,2157	0/0:10,0:10:30.07:0,30,553
chr10	76188377	.	T	TTTTTG	2935.04	PASS	AB=0.975;AC=10;AF=0.179;AN=56;BaseQRankSum=7.983;DP=586;FS=2.378;HRun=0;HaplotypeScore=114.9513;InbreedingCoeff=0.4291;MQ=69.41;MQ0=5;MQRankSum=-8.118;QD=26.68;ReadPosRankSum=2.653;VQSLOD=3.7187;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:21,1:22:33.32:702,0,33	0/0:18,0:18:51.07:0,51,811	0/0:34,0:16:2.21:0,2,224	0/0:31,0:19:5.84:0,6,214	0/0:28,0:28:75.23:0,75,1401	0/0:21,0:21:33.98:0,34,899	0/0:20,0:20:57.14:0,57,1041	0/0:40,0:40:99:0,108,1757	1/1:17,1:18:2.66:618,3,0	0/0:34,0:34:95.32:0,95,1727	0/0:15,0:15:24.61:0,25,579	0/1:16,0:16:9.63:599,0,10	1/1:19,0:19:18.01:394,18,0	0/0:14,0:14:30.09:0,30,543	0/0:27,0:27:75.22:0,75,1314	0/0:15,0:15:45.13:0,45,828	0/0:19,0:19:51.10:0,51,919	0/0:18,0:18:51.12:0,51,813	0/0:25,0:25:69.18:0,69,1179	0/0:15,0:15:45.11:0,45,832	0/0:9,0:9:21.07:0,21,413	0/1:11,0:11:9:259,0,9	0/1:16,1:17:13.46:390,0,13	1/1:6,1:7:8.89:122,9,0	0/0:16,0:16:48.02:0,48,775	0/0:27,0:27:72.21:0,72,1299	0/0:40,0:39:99:0,120,2221	0/0:10,0:10:30.07:0,30,527
chr10	76188803	.	CTCCCGCCTACTGGCAAACATTTGCAAAGTCCT	C	12753.62	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.845;DP=622;FS=9.618;HRun=0;HaplotypeScore=484.5466;InbreedingCoeff=0.9596;MQ=86.58;MQ0=0;MQRankSum=-11.400;QD=104.54;ReadPosRankSum=5.796;VQSLOD=2.1793;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,11:27:18.06:1515,18,0	0/0:11,0:11:33.11:0,33,3211	0/0:23,0:24:66.20:0,66,4305	0/0:25,0:25:69.24:0,69,4474	0/0:22,0:22:63.17:0,63,7454	0/0:14,0:14:42.13:0,42,4352	0/0:33,0:33:96.33:0,96,11146	0/0:31,0:31:81.28:0,81,6339	1/1:4,11:15:27.09:2273,27,0	0/0:24,0:24:72.21:0,72,8245	0/0:16,0:16:45.15:0,45,5331	1/1:14,15:29:36.12:3031,36,0	1/1:3,15:18:33.03:2778,33,0	0/0:22,0:22:66.23:0,66,8509	0/0:23,0:23:69.21:0,69,8428	0/0:18,0:18:54.19:0,54,7542	0/0:44,0:43:99:0,120,13062	0/0:34,0:34:93.31:0,93,11790	0/0:20,0:20:57.20:0,57,5692	0/0:19,0:19:51.15:0,51,5094	0/0:60,0:60:99:0,178,22209	1/1:3,6:9:18.06:1368,18,0	1/1:5,8:13:21.03:1535,21,0	1/1:9,2:11:2.80:252,3,0	0/0:16,0:16:45.14:0,45,5156	0/0:22,0:22:63.21:0,63,6961	0/0:17,0:17:48.16:0,48,6149	0/0:5,0:5:15.05:0,15,2157
chr10	76188966	.	T	TC	1541.80	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.722;DP=641;FS=1.273;HRun=3;HaplotypeScore=67.5960;InbreedingCoeff=0.9340;MQ=85.38;MQ0=0;MQRankSum=-3.303;QD=33.52;ReadPosRankSum=0.274;VQSLOD=3.9776;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,44:46:99:1637,117,0	0/0:7,0:7:18.06:0,18,216	0/0:23,0:23:34.94:0,35,633	0/0:21,0:21:45.08:0,45,507	0/0:13,0:13:39.12:0,39,468	0/0:24,0:24:69.21:0,69,828	0/0:36,0:36:99:0,99,1187	0/0:29,0:29:78.22:0,78,918	0/0:26,0:26:69.21:0,69,826	0/0:19,0:19:57.17:0,57,684	0/0:9,0:9:21.06:0,21,252	0/0:30,0:30:84.26:0,84,1007	0/0:21,0:21:60.03:0,60,686	0/0:27,0:27:75.23:0,75,899	0/0:28,0:28:84.25:0,84,998	0/0:15,0:15:39.11:0,39,457	0/0:36,0:36:99:0,102,1208	0/0:20,0:20:57.17:0,57,684	0/0:23,0:23:57.15:0,57,669	0/0:19,0:19:57.17:0,57,684	0/0:56,0:56:99:0,159,1881	0/0:21,0:21:60.18:0,60,719	0/0:15,0:15:36.11:0,36,432	0/0:20,0:20:45.14:0,45,540	0/0:18,0:18:51.16:0,51,612	0/0:23,0:23:63.19:0,63,756	0/0:13,0:13:36.11:0,36,432	0/0:3,0:3:9.03:0,9,108
chr10	76189579	.	GTT	G	2134.92	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.968;DP=550;FS=0.972;HRun=11;HaplotypeScore=73.8366;InbreedingCoeff=0.9923;MQ=60.67;MQ0=2;MQRankSum=3.117;QD=23.21;ReadPosRankSum=4.833;VQSLOD=3.4383;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:31:71.80:0,72,742	0/0:8,0:8:18.03:0,18,253	0/0:9,0:8:20.55:0,21,269	0/0:20,0:14:20.98:0,21,271	0/0:20,0:23:54.92:0,55,716	0/0:23,0:24:63.21:0,63,952	0/0:23,0:25:68.71:0,69,997	0/0:23,0:24:53.65:0,54,748	1/1:0,15:15:39.10:415,39,0	0/0:22,0:22:51.14:0,51,709	0/0:12,0:12:30.09:0,30,434	1/1:1,7:8:21.05:224,21,0	1/1:0,15:15:39.10:415,39,0	0/0:21,0:22:63.15:0,63,905	0/0:18,0:18:54.13:0,54,784	0/0:19,0:19:54.18:0,54,830	0/0:36,0:36:99:0,99,1435	0/0:34,0:35:99:0,99,1494	0/0:16,0:16:48.12:0,48,693	0/0:15,0:16:39.02:0,39,552	0/0:23,0:25:50.59:0,51,651	1/1:0,9:9:21.05:224,21,0	1/1:3,9:13:20.98:279,21,0	1/1:1,31:32:72.18:766,72,0	0/0:14,0:16:48.11:0,48,639	0/0:30,0:30:81.24:0,81,1187	0/0:19,0:19:51.17:0,51,780	0/0:7,0:7:18.06:0,18,272
chr10	76189668	.	GCGCACGCGCGCACACACACA	G	262.63	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.418;DP=623;FS=2.783;HRun=0;HaplotypeScore=282.6591;InbreedingCoeff=0.7796;MQ=61.24;MQ0=5;MQRankSum=-3.255;QD=9.38;ReadPosRankSum=-2.257;VQSLOD=2.2486;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,23:28:6.91:344,7,0	0/0:4,0:4:12.04:0,12,801	0/0:24,0:8:20.85:0,21,415	0/0:36,0:14:11:0,11,185	0/0:18,0:17:48.15:0,48,2537	0/0:21,0:21:60.15:0,60,4038	0/0:23,0:23:66.23:0,66,3971	0/0:26,0:26:72.22:0,72,2227	0/0:19,0:19:24.20:0,24,961	0/0:23,0:22:62.96:0,63,2935	0/0:21,0:21:54.17:0,54,3618	0/0:21,0:20:42.62:0,43,1531	0/0:21,0:21:46.89:0,47,2000	0/0:28,0:28:84.29:0,84,5031	0/0:23,0:23:54.10:0,54,3331	0/0:15,0:15:39.09:0,39,2007	0/0:35,0:35:99:0,99,5524	0/0:32,0:31:84.24:0,84,4767	0/0:18,0:18:48.16:0,48,1954	0/0:21,0:21:60.19:0,60,3041	0/0:50,0:49:99:0,138,7615	0/0:10,0:10:22.29:0,22,968	0/0:5,0:5:9:0,9,384	0/0:30,0:30:39.12:0,39,1109	0/0:22,0:22:60.09:0,60,3217	0/0:25,0:25:75.24:0,75,4362	0/0:17,0:17:42.08:0,42,2373	0/0:6,0:6:18.06:0,18,1193
chr10	76189678	.	GCA	G	161.20	PASS	AB=0.981;AC=10;AF=0.185;AN=54;BaseQRankSum=1.753;DP=638;FS=0.000;HRun=0;HaplotypeScore=99.2736;InbreedingCoeff=0.0075;MQ=58.47;MQ0=7;MQRankSum=0.060;QD=0.63;ReadPosRankSum=-2.304;VQSLOD=1.4100;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:34:6.56:30,7,0	0/0:4,0:4:6:0,6,66	0/0:23,0:7:2.04:0,2,6	./.	0/0:19,0:18:13.47:0,13,166	0/0:18,0:18:27.07:0,27,377	0/1:22,3:25:12.22:12,0,223	0/1:27,0:27:14.45:14,0,48	0/1:22,0:22:0.01:0,0,0	0/0:22,0:21:12.01:0,12,157	0/0:20,0:20:16.25:0,16,181	0/0:27,0:26:11.98:0,12,99	0/0:20,0:19:9.47:0,9,79	0/0:25,0:26:18.96:0,19,402	0/0:20,0:20:18.05:0,18,245	0/1:13,0:13:35.85:36,0,177	0/1:29,1:31:16.73:17,0,450	0/0:30,1:31:12.52:0,13,434	0/0:20,0:20:0.79:0,1,92	0/0:19,0:19:21.05:0,21,271	0/1:58,1:57:99:148,0,593	0/0:12,0:12:1.95:0,2,17	0/0:10,0:10:0:0,0,0	0/0:35,0:35:2.52:0,3,23	0/0:19,0:19:10.70:0,11,156	0/1:26,0:26:27.16:27,0,116	0/1:17,0:17:3.69:4,0,251	0/0:6,0:6:5.98:0,6,65
chr10	76192270	.	TAGAG	T	2522.09	PASS	AB=0.875;AC=13;AF=0.232;AN=56;BaseQRankSum=10.906;DP=761;FS=10.073;HRun=0;HaplotypeScore=139.6761;InbreedingCoeff=0.8328;MQ=71.61;MQ0=16;MQRankSum=-1.292;QD=16.48;ReadPosRankSum=5.084;VQSLOD=2.6000;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:22:2.02:0,2,22	0/0:7,0:7:15.05:0,15,366	0/0:60,0:23:0.53:0,1,222	0/0:95,0:39:24.37:0,24,374	0/0:31,0:32:71.73:0,72,1423	0/0:26,0:27:50.79:0,51,878	0/0:18,0:19:47.82:0,48,938	0/0:36,0:36:54.16:0,54,1025	1/1:7,25:32:41.96:818,42,0	0/0:26,0:26:57.19:0,57,1297	0/0:16,0:15:24.04:0,24,415	1/1:6,14:20:15.05:247,15,0	1/1:5,5:10:12.04:198,12,0	0/1:18,2:21:4.37:4,0,812	0/0:17,0:17:42.14:0,42,980	0/0:15,0:15:39.13:0,39,951	0/0:31,0:31:66.22:0,66,1452	0/0:28,0:28:63.18:0,63,1358	0/0:21,0:22:50.28:0,50,979	0/0:24,0:25:44.76:0,45,851	0/0:31,0:30:72.72:0,73,1669	1/1:5,20:25:33.29:486,33,0	1/1:5,22:27:35.62:535,36,0	1/1:4,14:18:27.05:416,27,0	0/0:23,0:23:48.14:0,48,986	0/0:21,0:23:43.31:0,43,948	0/0:28,0:29:65.93:0,66,1376	0/0:21,0:20:42.14:0,42,869
chr10	76193333	.	CAG	C	9024.93	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=17.308;DP=722;FS=0.000;HRun=0;HaplotypeScore=99.7956;InbreedingCoeff=0.9997;MQ=88.84;MQ0=0;MQRankSum=-3.905;QD=42.98;ReadPosRankSum=4.194;VQSLOD=6.6198;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,47:47:99:2099,129,0	0/0:10,0:10:27.09:0,27,539	0/0:30,0:30:84.16:0,84,1477	0/0:23,0:23:57.82:0,58,1079	0/0:25,0:25:75.26:0,75,1495	0/0:20,0:20:60.21:0,60,1219	0/0:22,0:22:66.23:0,66,1329	0/0:34,0:34:99:0,102,2052	1/1:0,21:21:57.19:928,57,0	0/0:27,0:27:81.27:0,81,1613	0/0:23,0:23:69.23:0,69,1366	1/1:0,34:34:87.30:1416,87,0	1/1:1,28:29:78.27:1266,78,0	0/0:25,0:25:75.26:0,75,1517	0/0:26,0:26:78.26:0,78,1537	0/0:38,0:38:99:0,111,2188	0/0:17,0:17:51.17:0,51,1024	0/0:23,0:23:69.24:0,69,1401	0/0:22,0:22:66.23:0,66,1306	0/0:25,0:25:75.26:0,75,1522	0/0:33,0:33:99:0,99,1975	1/1:0,26:26:69.24:1119,69,0	1/1:0,19:19:51.05:827,51,0	1/1:0,34:34:84.29:1369,84,0	0/0:26,0:26:78.27:0,78,1557	0/0:25,0:25:75.25:0,75,1489	0/0:28,0:28:81.28:0,81,1645	0/0:10,0:10:30.10:0,30,609
chr10	76194543	.	GCATA	G	2473.28	PASS	AB=0.934;AC=19;AF=0.380;AN=50;BaseQRankSum=10.374;DP=816;FS=2.845;HRun=0;HaplotypeScore=141.7882;InbreedingCoeff=0.4321;MQ=61.84;MQ0=17;MQRankSum=-1.053;QD=6.14;ReadPosRankSum=1.960;VQSLOD=2.8614;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:43:6.01:57,6,0	0/0:16,0:16:36.09:0,36,694	./.	./.	0/0:25,0:25:30.10:0,30,684	0/1:36,1:37:3.96:4,0,1019	0/1:25,0:25:0.90:1,0,378	./.	1/1:19,11:31:48.11:653,48,0	0/0:40,0:40:63.17:0,63,1177	0/0:32,1:33:19.92:0,20,1274	0/1:27,11:39:28.03:497,0,28	1/1:17,7:25:39.10:536,39,0	0/0:35,2:37:23.07:0,23,1204	0/1:42,2:44:32.04:32,0,1118	0/1:36,1:38:7.95:8,0,1150	0/0:26,0:26:33.10:0,33,678	0/0:17,0:17:24:0,24,342	0/1:23,0:22:21.43:21,0,401	0/1:22,3:25:38.12:38,0,907	0/0:47,0:47:78.22:0,78,1570	1/1:17,9:26:27.06:356,27,0	1/1:14,7:21:18.04:238,18,0	1/1:23,3:26:18.01:210,18,0	0/0:18,0:18:29.97:0,30,511	0/0:31,0:30:57.18:0,57,1207	0/0:30,0:30:11.06:0,11,497	0/0:10,0:10:9.01:0,9,152
chr10	76194622	.	ACT	A	8063.19	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.865;DP=847;FS=5.827;HRun=0;HaplotypeScore=117.4742;InbreedingCoeff=0.9999;MQ=65.11;MQ0=0;MQRankSum=-1.601;QD=43.35;ReadPosRankSum=4.137;VQSLOD=6.5281;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:75.26:0,75,1514	0/0:10,0:10:30.10:0,30,609	0/0:19,0:18:51.01:0,51,988	0/0:23,0:21:63.21:0,63,1218	0/0:32,0:32:93.29:0,93,1816	0/0:23,0:23:69.22:0,69,1348	0/0:24,0:24:72.20:0,72,1325	0/0:29,0:29:84.26:0,84,1583	1/1:0,34:34:96.33:1550,96,0	0/0:46,0:46:99:0,138,2722	0/0:36,0:36:99:0,102,2025	1/1:0,33:33:90.30:1432,90,0	1/1:2,28:30:81.26:1276,81,0	0/0:32,0:32:93.32:0,93,1865	0/0:36,0:36:99:0,108,2047	0/0:35,1:36:59.45:0,59,2036	0/0:29,0:29:84.21:0,84,1608	0/0:26,0:26:78.25:0,78,1544	0/0:27,0:27:78.25:0,78,1531	0/0:29,0:29:84.25:0,84,1587	0/0:51,0:51:99:0,153,2948	1/1:0,36:36:96.23:1467,96,0	1/1:1,31:32:96.31:1506,96,0	1/1:0,21:21:50.91:831,51,0	0/0:18,0:18:54.19:0,54,1085	0/0:51,0:51:99:0,154,3083	0/0:29,0:29:87.27:0,87,1685	0/0:17,0:17:48.16:0,48,973
chr10	76195106	.	GTT	G	2665.93	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.833;DP=543;FS=13.281;HRun=11;HaplotypeScore=70.1269;InbreedingCoeff=0.9749;MQ=71.46;MQ0=0;MQRankSum=-1.742;QD=23.39;ReadPosRankSum=2.197;VQSLOD=1.7513;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:51.11:543,51,0	0/0:8,0:9:27.08:0,27,378	0/0:9,0:10:11.06:0,11,128	0/0:9,0:8:11.77:0,12,113	0/0:24,0:24:63.17:0,63,889	0/0:23,0:23:54.17:0,54,811	0/0:16,0:17:44.62:0,45,627	0/0:24,0:25:51.17:0,51,768	1/1:0,17:18:44.85:459,45,0	0/0:25,0:26:56.66:0,57,802	0/0:20,0:21:60.13:0,60,820	1/1:2,12:14:33.08:351,33,0	1/1:1,14:16:41.84:427,42,0	0/0:11,0:12:23.89:0,24,496	0/0:16,0:17:47.63:0,48,663	0/0:22,0:29:80.67:0,81,1091	0/0:15,0:16:41.63:0,42,606	0/0:27,0:30:80.16:0,80,1085	0/0:19,1:20:19.17:0,19,603	0/0:29,0:33:88.68:0,89,1149	0/0:14,0:16:39.05:0,39,484	1/1:2,14:16:36.07:382,36,0	1/1:1,10:11:27.05:287,27,0	1/1:3,16:19:39.09:415,39,0	0/0:20,0:20:48.15:0,48,719	0/0:35,0:38:99:0,101,1374	0/0:29,0:30:80.72:0,81,1165	0/0:3,0:3:9.03:0,9,139
chr10	76196065	.	A	AGT	6455.81	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-13.769;DP=738;FS=0.359;HRun=0;HaplotypeScore=85.5980;InbreedingCoeff=0.9982;MQ=85.17;MQ0=2;MQRankSum=-6.542;QD=40.86;ReadPosRankSum=1.233;VQSLOD=6.6598;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:57.72:0,58,949	0/0:11,0:11:30.10:0,30,394	0/0:44,0:44:67.16:0,67,1167	0/0:31,0:31:64.88:0,65,894	0/0:30,0:30:81.25:0,81,1049	0/0:20,0:20:48.16:0,48,631	0/0:25,0:25:66.21:0,66,867	0/0:38,0:38:99:0,105,1369	1/1:6,24:29:63.22:1080,63,0	0/0:33,0:33:90.29:0,90,1183	0/0:16,0:16:42.14:0,42,552	1/1:3,19:22:48.16:823,48,0	1/1:5,19:25:60.20:1005,60,0	0/0:29,0:29:75.07:0,75,986	0/0:41,0:41:99:0,102,1311	0/0:24,0:24:66.21:0,66,868	0/0:30,0:30:75.23:0,75,970	0/0:22,0:22:49.57:0,50,667	0/0:25,0:24:42.23:0,42,826	0/0:22,0:22:54.17:0,54,710	0/0:24,0:24:66.21:0,66,868	1/1:4,24:27:66.23:1130,66,0	1/1:2,25:27:69.24:1183,69,0	1/1:2,24:26:72.25:1235,72,0	0/0:25,0:25:63.19:0,63,815	0/0:25,0:25:72.23:0,72,946	0/0:30,0:29:81.25:0,81,1050	0/0:7,0:7:18.06:0,18,237
chr10	76199073	.	A	AT	502.87	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=4.323;DP=388;FS=2.905;HRun=11;HaplotypeScore=66.1401;InbreedingCoeff=0.8717;MQ=57.99;MQ0=6;MQRankSum=-3.612;QD=7.86;ReadPosRankSum=-1.385;VQSLOD=2.1084;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,11:15:24.05:243,24,0	0/0:6,0:6:14.94:0,15,116	0/0:10,0:7:6.42:0,6,100	0/0:9,0:8:10.71:0,11,90	0/0:18,1:20:15.52:0,16,284	0/0:17,0:17:32.85:0,33,255	0/0:10,0:10:23.89:0,24,183	0/0:21,1:24:26.46:0,26,359	1/1:5,0:10:18.95:100,19,0	0/0:16,0:16:35.72:0,36,278	0/0:15,0:16:36.75:0,37,244	1/1:4,0:5:6.21:39,6,0	1/1:7,0:9:4.21:69,4,0	0/0:9,0:9:11.93:0,12,91	0/0:10,0:11:25.93:0,26,192	0/0:7,0:8:22.94:0,23,167	0/0:31,0:31:73.53:0,74,545	0/0:14,1:14:17.57:0,18,180	0/0:22,2:26:6.52:0,7,292	0/0:13,0:13:32.85:0,33,255	0/0:5,0:5:14.88:0,15,110	1/1:2,0:7:17.23:92,17,0	1/1:2,0:9:19.89:100,20,0	1/1:2,0:3:8.52:43,9,0	0/0:13,1:14:10.23:0,10,167	0/0:27,0:27:50.70:0,51,388	0/0:16,0:16:46.74:0,47,338	0/0:15,0:15:44.83:0,45,348
chr10	76199375	.	TCA	T	454.24	PASS	AB=0.882;AC=12;AF=0.222;AN=54;BaseQRankSum=6.057;DP=656;FS=0.000;HRun=0;HaplotypeScore=104.6939;InbreedingCoeff=-0.2040;MQ=65.59;MQ0=7;MQRankSum=-0.654;QD=1.63;ReadPosRankSum=1.926;VQSLOD=1.7444;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:49:54.04:0,54,572	0/1:5,3:8:33.33:88,0,33	0/0:31,0:17:6.02:0,6,81	0/0:25,0:17:3.01:0,3,43	0/1:10,4:13:76.07:76,0,203	0/1:25,5:31:79.40:79,0,506	0/1:24,2:26:39.65:40,0,291	0/1:19,3:22:45.69:46,0,187	0/1:25,0:22:0:0,0,0	0/0:29,0:29:54.15:0,54,738	0/0:13,0:14:3.95:0,4,213	./.	0/1:13,0:12:0:0,0,1	0/0:25,0:25:30.05:0,30,398	0/0:25,0:25:30.10:0,30,454	0/0:25,1:26:11.77:0,12,602	0/1:28,1:30:4.35:4,0,706	0/1:23,2:26:32.77:33,0,541	0/0:14,0:14:12.04:0,12,182	0/0:10,0:10:12.04:0,12,182	0/1:42,3:46:54.17:54,0,541	0/0:15,0:15:2.67:0,3,25	0/0:14,0:12:3:0,3,26	0/0:37,0:36:17.65:0,18,137	0/0:22,0:22:33.07:0,33,433	0/1:13,4:17:99:109,0,158	0/0:19,0:20:27.03:0,27,376	0/1:15,3:18:57.94:58,0,453
chr10	76200133	.	CTAA	C	4181.94	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.463;DP=537;FS=2.600;HRun=0;HaplotypeScore=77.9565;InbreedingCoeff=0.9986;MQ=92.15;MQ0=1;MQRankSum=-2.616;QD=40.21;ReadPosRankSum=1.587;VQSLOD=4.5211;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.22:0,63,1409	0/0:11,0:11:30.10:0,30,680	0/0:28,0:28:78.27:0,78,1687	0/0:19,0:19:57.14:0,57,1095	0/0:27,0:27:78.25:0,78,1723	0/0:36,0:36:99:0,105,2342	0/0:13,0:13:39.13:0,39,873	0/0:24,0:24:57.19:0,57,1251	1/1:1,18:19:48.16:798,48,0	0/0:21,0:21:63.18:0,63,1320	0/0:14,0:14:42.14:0,42,933	1/1:2,13:15:36.12:599,36,0	1/1:1,15:16:39.13:650,39,0	0/0:8,0:8:21.07:0,21,476	0/0:20,0:20:60.19:0,60,1316	0/0:14,0:14:39.12:0,39,838	0/0:27,0:27:72.25:0,72,1631	0/0:12,0:12:33.11:0,33,747	0/0:14,0:14:42.14:0,42,952	0/0:18,0:18:54.19:0,54,1202	0/0:14,0:13:33.11:0,33,748	1/1:1,13:14:33.11:549,33,0	1/1:1,21:22:51.17:850,51,0	1/1:1,17:18:45.15:736,45,0	0/0:24,0:24:69.24:0,69,1564	0/0:28,0:28:84.28:0,84,1859	0/0:30,0:29:87.30:0,87,1933	0/0:9,0:9:27.09:0,27,612
chr10	76202236	.	GT	G	838.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.032;DP=751;FS=13.080;HRun=7;HaplotypeScore=109.4350;InbreedingCoeff=0.9988;MQ=67.62;MQ0=1;MQRankSum=-4.398;QD=23.96;ReadPosRankSum=-0.832;VQSLOD=2.1285;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:35:93.13:933,93,0	0/0:11,0:11:30.09:0,30,366	0/0:38,0:29:41.46:0,41,565	0/0:50,1:39:71.81:0,72,792	0/0:35,0:35:93.30:0,93,1169	0/0:17,0:17:45.14:0,45,566	0/0:23,0:23:60.18:0,60,738	0/0:34,0:33:93.27:0,93,1134	0/0:34,0:34:87.27:0,87,1081	0/0:32,0:32:90.28:0,90,1121	0/0:21,0:20:60.18:0,60,734	0/0:26,0:27:66.19:0,66,808	0/0:31,0:31:78.21:0,78,940	0/0:25,0:25:69.22:0,69,867	0/0:23,0:23:66.20:0,66,817	0/0:21,0:21:60.19:0,60,754	0/0:39,0:39:99:0,102,1267	0/0:17,0:17:51.16:0,51,639	0/0:17,0:17:45.14:0,45,563	0/0:28,0:28:81.26:0,81,1015	0/0:10,0:10:30.08:0,30,364	0/0:24,0:24:63.20:0,63,792	0/0:26,0:26:75.23:0,75,932	0/0:29,0:29:78.23:0,78,956	0/0:21,0:21:57.18:0,57,717	0/0:30,0:30:81.24:0,81,994	0/0:36,0:36:99:0,99,1229	0/0:15,0:15:36.12:0,36,453
chr10	76202262	.	T	TTTTG	8830.87	PASS	AB=0.957;AC=15;AF=0.268;AN=56;BaseQRankSum=-10.405;DP=762;FS=1.703;HRun=0;HaplotypeScore=126.7917;InbreedingCoeff=0.9032;MQ=62.94;MQ0=3;MQRankSum=-0.554;QD=35.75;ReadPosRankSum=2.658;VQSLOD=4.8835;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,21:40:71.43:1495,71,0	0/0:9,0:9:21.07:0,21,337	0/0:37,0:26:14.79:0,15,235	0/0:44,0:35:16.91:0,17,241	0/0:36,0:36:60.15:0,60,942	0/0:18,0:18:38.78:0,39,546	0/0:23,0:23:30.86:0,31,593	0/0:36,0:36:36.11:0,36,529	1/1:10,26:37:66.23:1580,66,0	0/0:25,0:25:48.16:0,48,751	0/0:23,0:23:51.14:0,51,772	1/1:7,15:23:35.96:864,36,0	1/1:8,18:26:39.13:937,39,0	0/0:27,0:27:63.21:0,63,1012	0/0:20,0:20:36.12:0,36,573	0/1:21,1:22:30:30,0,585	0/0:37,0:37:72.22:0,72,1100	0/0:20,0:20:48.16:0,48,771	0/0:17,0:17:24.06:0,24,360	0/0:24,0:25:51.14:0,51,754	0/0:15,0:15:33.11:0,33,525	1/1:11,22:33:51.17:1135,51,0	1/1:8,17:26:51.17:1186,51,0	1/1:6,31:39:69.15:1604,69,0	0/0:21,0:21:51.17:0,51,799	0/0:29,0:29:66.19:0,66,955	0/0:39,0:39:93.28:0,93,1413	0/0:11,0:11:30.07:0,30,415
chr10	76203343	.	C	CAT	6695.38	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-14.274;DP=724;FS=5.696;HRun=0;HaplotypeScore=82.2263;InbreedingCoeff=0.9968;MQ=78.25;MQ0=1;MQRankSum=-3.035;QD=42.65;ReadPosRankSum=3.409;VQSLOD=6.7832;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:55:99:0,153,2102	0/0:18,0:18:54.14:0,54,717	0/0:35,0:32:90.22:0,90,1200	0/0:29,0:28:74.24:0,74,998	0/0:22,0:22:66.22:0,66,943	0/0:22,0:22:63.20:0,63,882	0/0:17,0:17:51.12:0,51,667	0/0:28,0:28:84.23:0,84,1104	1/1:1,26:27:66.23:1208,66,0	0/0:38,0:38:99:0,111,1570	0/0:19,0:19:48.15:0,48,667	1/1:1,32:35:71.95:1314,72,0	1/1:1,28:29:63.22:1153,63,0	0/0:25,0:25:66.19:0,66,906	0/0:24,0:24:66.20:0,66,925	0/0:20,0:20:60.18:0,60,823	0/0:21,0:21:60.15:0,60,801	0/0:19,0:18:48.12:0,48,646	0/0:18,0:18:51.15:0,51,699	0/0:22,0:22:66.21:0,66,926	0/0:39,0:39:99:0,108,1523	1/1:3,19:22:48.16:879,48,0	1/1:0,24:24:63.22:1154,63,0	1/1:0,20:20:54.19:988,54,0	0/0:19,0:19:57.14:0,57,755	0/0:36,0:36:99:0,105,1502	0/0:35,0:35:99:0,102,1381	0/0:5,0:5:15.05:0,15,215
chr10	76203937	.	ACAC	A	3488.50	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.739;DP=757;FS=1.981;HRun=0;HaplotypeScore=116.7156;InbreedingCoeff=0.9989;MQ=67.58;MQ0=2;MQRankSum=-0.512;QD=27.25;ReadPosRankSum=5.553;VQSLOD=3.4882;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:87.11:0,87,2767	0/0:18,0:18:51.16:0,51,994	0/0:40,0:28:51.12:0,51,830	0/0:36,0:28:54.07:0,54,920	0/0:19,0:19:42.08:0,42,817	0/0:30,0:30:66.18:0,66,1268	0/0:35,0:35:78.24:0,78,1522	0/0:31,0:31:66.22:0,66,1263	1/1:5,17:22:39.13:571,39,0	0/0:27,0:27:60.19:0,60,1170	0/0:20,0:20:45.14:0,45,858	1/1:3,25:28:57.19:827,57,0	1/1:2,17:19:48.16:696,48,0	0/0:28,0:28:72.23:0,72,1442	0/0:26,0:26:57.20:0,57,1175	0/0:16,0:16:33.11:0,33,671	0/0:47,0:47:99:0,117,2353	0/0:23,0:23:57.20:0,57,1169	0/0:38,0:38:83.24:0,83,1572	0/0:21,0:21:39.13:0,39,781	0/0:42,0:42:78.25:0,78,1527	1/1:5,13:18:29.84:386,30,0	1/1:6,10:17:21.07:307,21,0	1/1:3,21:24:47.96:702,48,0	0/0:18,0:18:51.17:0,51,1015	0/0:27,0:26:66.21:0,66,1326	0/0:17,0:17:45.15:0,45,904	0/0:13,0:13:33.11:0,33,663
chr10	76205415	.	AAAGG	A	33.87	PASS	AB=1.000;AC=12;AF=0.231;AN=52;BaseQRankSum=6.166;DP=503;FS=1.958;HRun=0;HaplotypeScore=130.9335;InbreedingCoeff=0.2468;MQ=47.41;MQ0=18;MQRankSum=-4.447;QD=0.22;ReadPosRankSum=-0.669;VQSLOD=2.7157;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:16:14.19:0,14,97	0/0:11,0:11:14.97:0,15,199	./.	./.	0/0:28,0:26:40.78:0,41,514	0/0:26,0:25:59.94:0,60,1010	0/0:19,0:17:21.19:0,21,235	0/1:26,0:21:13.15:13,0,74	0/1:9,0:8:17.52:18,0,28	0/0:24,0:24:15.01:0,15,475	0/0:17,0:17:20.99:0,21,350	0/1:21,0:19:8.40:8,0,29	0/1:21,0:20:7.37:7,0,24	0/0:19,0:19:29.96:0,30,374	0/0:20,0:20:27.03:0,27,381	1/1:5,15:20:5.96:66,6,0	0/0:33,0:33:41.57:0,42,690	0/0:19,0:19:29.24:0,29,311	0/0:14,0:11:21.03:0,21,287	0/0:13,0:12:14.98:0,15,240	0/0:22,0:22:48:0,48,663	0/1:13,0:11:2.58:3,0,46	0/1:19,0:17:3.45:3,0,26	1/1:6,0:6:0.85:6,1,0	1/1:8,10:17:3.01:39,3,0	0/0:25,0:25:48.09:0,48,616	0/0:17,0:17:24.01:0,24,317	0/0:16,0:15:23.62:0,24,345
chr10	76205419	.	G	GA	1383.61	PASS	AB=0.797;AC=8;AF=0.154;AN=52;BaseQRankSum=10.621;DP=494;FS=1.246;HRun=2;HaplotypeScore=96.3879;InbreedingCoeff=0.4189;MQ=47.32;MQ0=18;MQRankSum=-8.543;QD=16.09;ReadPosRankSum=2.426;VQSLOD=3.8940;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,2:17:32.83:0,33,365	0/0:11,0:11:30.06:0,30,355	./.	./.	0/0:27,0:25:72.22:0,72,886	0/0:25,0:24:72.21:0,72,877	0/0:19,0:17:25.79:0,26,490	0/0:27,0:22:63.05:0,63,709	1/1:4,5:8:4.01:158,4,0	0/0:24,0:24:72.21:0,72,876	0/0:16,0:16:38.98:0,39,479	1/1:12,9:19:16.12:477,16,0	0/1:10,8:17:2.92:396,0,3	0/0:15,0:15:37:0,37,405	0/0:22,0:22:63.16:0,63,754	0/0:19,0:19:20.84:0,21,221	0/0:33,0:33:99:0,99,1192	0/0:20,0:20:58.87:0,59,661	0/0:16,0:11:30.09:0,30,370	0/0:15,0:14:27.08:0,27,334	0/0:22,0:22:63.20:0,63,780	0/1:9,4:11:36.61:199,0,37	0/1:12,7:17:60.58:256,0,61	0/1:6,0:6:15.81:34,0,16	0/0:18,0:17:24.01:0,24,278	0/0:23,0:23:66.21:0,66,817	0/0:17,0:17:47.12:0,47,591	0/0:14,0:13:35.29:0,35,391
chr10	76205420	.	AAGG	A	1223.95	PASS	AB=0.908;AC=10;AF=0.192;AN=52;BaseQRankSum=11.359;DP=493;FS=2.697;HRun=0;HaplotypeScore=115.3678;InbreedingCoeff=0.6618;MQ=47.22;MQ0=17;MQRankSum=-9.221;QD=14.23;ReadPosRankSum=2.959;VQSLOD=3.6036;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:17:28.99:0,29,425	0/0:11,0:11:30.07:0,30,488	./.	./.	0/0:26,0:24:72.24:0,72,1263	0/0:25,0:24:72.22:0,72,1494	0/0:19,0:17:33.45:0,33,764	0/0:28,0:23:66.06:0,66,802	1/1:9,0:8:16.83:130,17,0	0/0:24,0:24:72.01:0,72,1198	0/0:16,0:16:42.14:0,42,722	1/1:20,1:19:15.80:428,16,0	1/1:17,1:17:5.96:348,6,0	0/0:15,0:15:42.12:0,42,749	0/0:22,0:22:63.21:0,63,1085	0/0:19,0:19:10.85:0,11,180	0/0:34,0:34:99:0,102,1699	0/0:20,0:20:57.17:0,57,937	0/0:16,0:11:30.10:0,30,574	0/0:14,0:13:33.11:0,33,560	0/0:23,0:23:63.21:0,63,1229	0/1:11,2:11:56.63:194,0,57	0/1:18,1:17:59.85:230,0,60	1/1:5,1:6:3.74:44,4,0	0/0:18,0:17:19.94:0,20,258	0/0:22,0:22:66.22:0,66,1289	0/0:17,0:17:47.54:0,48,818	0/0:14,0:13:39.12:0,39,642
chr10	76205423	.	G	GA	1077.70	PASS	AB=0.929;AC=10;AF=0.192;AN=52;BaseQRankSum=11.382;DP=485;FS=2.477;HRun=2;HaplotypeScore=95.8456;InbreedingCoeff=0.7907;MQ=47.33;MQ0=16;MQRankSum=-9.399;QD=12.98;ReadPosRankSum=1.455;VQSLOD=2.8187;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:16:29.88:0,30,337	0/0:11,0:11:27.06:0,27,319	./.	./.	0/0:27,0:25:72.17:0,72,869	0/0:24,0:23:69.22:0,69,854	0/0:18,0:16:26.99:0,27,485	0/0:28,0:23:60.18:0,60,734	1/1:9,0:8:15.83:121,16,0	0/0:24,0:24:69.20:0,69,833	0/0:16,0:16:38.98:0,39,481	1/1:15,6:19:49.11:445,49,0	1/1:17,1:17:15.77:249,16,0	0/0:15,0:15:36.98:0,37,390	0/0:22,0:22:60.19:0,60,743	0/0:18,0:18:17.92:0,18,199	0/0:35,0:35:99:0,105,1236	0/0:20,0:20:55:0,55,651	0/0:14,0:10:27.07:0,27,322	0/0:12,0:11:33.10:0,33,406	0/0:24,0:24:66.20:0,66,807	0/1:10,2:10:17.71:117,0,18	1/1:17,1:16:28.41:268,28,0	0/1:5,0:5:3.03:42,0,3	0/0:18,0:17:23.99:0,24,253	0/0:23,0:23:69.21:0,69,844	0/0:19,0:19:53.10:0,53,635	0/0:14,0:13:36.11:0,36,441
chr10	76205424	.	AAGG	A	1188.31	PASS	AB=0.875;AC=10;AF=0.192;AN=52;BaseQRankSum=10.788;DP=483;FS=1.163;HRun=0;HaplotypeScore=113.0687;InbreedingCoeff=0.6043;MQ=47.40;MQ0=15;MQRankSum=-8.394;QD=14.49;ReadPosRankSum=1.448;VQSLOD=3.1017;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:16:25.21:0,25,371	0/0:10,0:10:27.06:0,27,452	./.	./.	0/0:27,0:25:72.24:0,72,1264	0/0:24,0:23:69.23:0,69,1473	0/0:18,0:16:37.61:0,38,735	0/0:28,0:24:66.05:0,66,840	0/1:6,3:8:26.65:127,0,27	0/0:24,0:24:72.01:0,72,1191	0/0:16,0:16:39.09:0,39,690	1/1:20,1:19:26.32:440,26,0	1/1:15,3:17:1.55:304,2,0	0/0:15,0:15:42.12:0,42,748	0/0:22,0:22:63.21:0,63,1085	0/0:18,0:18:7.85:0,8,157	0/0:35,0:35:99:0,105,1728	0/0:21,0:21:60.20:0,60,999	0/0:13,0:9:27.08:0,27,526	0/0:12,0:11:33.10:0,33,548	0/0:24,0:24:66.22:0,66,1266	0/1:11,0:9:59.37:138,0,59	1/1:18,0:16:6.25:256,6,0	1/1:3,2:5:4.57:68,5,0	0/0:18,0:17:19.88:0,20,229	0/0:23,0:23:69.23:0,69,1325	0/0:19,0:19:54.65:0,55,893	0/0:14,0:13:36.12:0,36,661
chr10	76205439	.	G	GA	216.98	PASS	AB=0.948;AC=6;AF=0.115;AN=52;BaseQRankSum=7.202;DP=479;FS=5.508;HRun=2;HaplotypeScore=97.4832;InbreedingCoeff=-0.1329;MQ=46.19;MQ0=21;MQRankSum=-6.399;QD=2.49;ReadPosRankSum=1.243;VQSLOD=-0.3509;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:11,9:17:83.80:212,0,84	0/0:9,0:9:21.07:0,21,260	./.	./.	0/0:28,0:26:66.16:0,66,799	0/0:26,0:26:68.84:0,69,854	0/0:18,0:16:39.12:0,39,482	0/0:32,0:29:84.02:0,84,935	0/1:10,0:9:33.72:34,0,81	0/0:18,0:18:54.15:0,54,641	0/0:15,0:15:36.01:0,36,445	0/1:20,0:18:24.45:24,0,277	0/1:16,0:17:33.69:34,0,300	0/0:15,0:15:37:0,37,406	0/0:16,0:16:45.14:0,45,557	0/0:19,0:19:17.92:0,18,197	0/0:32,0:32:84.20:0,84,990	0/0:19,0:19:37.42:0,37,579	0/0:13,0:11:26.40:0,26,305	0/0:11,0:10:24.08:0,24,297	0/0:31,0:31:87.26:0,87,1064	0/1:11,0:10:23.83:24,0,163	0/1:9,0:7:10.59:11,0,114	0/0:6,0:6:7.79:0,8,47	0/0:17,0:17:17.77:0,18,181	0/0:22,0:22:66.21:0,66,817	0/0:14,0:14:42.13:0,42,518	0/0:16,0:15:45.14:0,45,555
chr10	76205447	.	G	GA	832.41	PASS	AB=0.938;AC=10;AF=0.179;AN=56;BaseQRankSum=10.369;DP=472;FS=2.047;HRun=2;HaplotypeScore=84.5192;InbreedingCoeff=0.4271;MQ=46.55;MQ0=21;MQRankSum=-9.157;QD=9.68;ReadPosRankSum=2.017;VQSLOD=1.6820;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:17:73.46:229,0,73	0/0:7,0:7:21.07:0,21,257	0/0:13,0:3:5.23:0,5,44	0/0:8,0:2:6.02:0,6,69	0/0:25,0:23:60.19:0,60,742	0/0:28,0:27:74.85:0,75,914	0/0:19,0:17:47.57:0,48,524	0/0:35,0:32:81.12:0,81,932	1/1:7,3:9:7.95:124,8,0	0/0:18,0:18:51.15:0,51,617	0/0:15,0:15:36.01:0,36,440	1/1:15,2:16:4.48:180,4,0	0/1:14,3:17:8.30:198,0,8	0/0:14,0:14:34:0,34,381	0/0:17,0:17:48.14:0,48,584	0/0:18,0:18:17.92:0,18,198	0/0:28,0:28:78.04:0,78,919	0/0:19,0:19:41.60:0,42,572	0/0:14,0:11:30.09:0,30,372	0/0:9,0:9:27.08:0,27,334	0/0:31,0:31:87.24:0,87,1061	0/1:8,1:8:20.44:98,0,20	1/1:5,1:5:7.16:81,7,0	0/1:7,0:7:5.77:67,0,6	0/0:18,0:17:6.30:0,6,61	0/0:21,0:21:63.19:0,63,769	0/0:14,0:14:42.13:0,42,515	0/0:15,0:14:42.13:0,42,520
chr10	76205455	.	G	GA	948.89	PASS	AB=0.939;AC=12;AF=0.214;AN=56;BaseQRankSum=10.873;DP=472;FS=14.714;HRun=2;HaplotypeScore=81.3232;InbreedingCoeff=0.5556;MQ=46.84;MQ0=17;MQRankSum=-9.226;QD=9.68;ReadPosRankSum=0.562;VQSLOD=0.1476;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:18,2:18:47.93:253,0,48	0/0:6,0:6:18.06:0,18,223	0/0:17,0:6:8.97:0,9,93	0/0:9,0:2:6.02:0,6,74	0/0:22,0:20:57.18:0,57,695	0/0:27,0:27:77.80:0,78,960	0/0:21,0:19:50.47:0,50,573	0/0:32,0:30:81.67:0,82,933	1/1:6,3:9:2.30:139,2,0	0/0:17,0:17:51.03:0,51,609	0/0:13,0:13:36.11:0,36,444	1/1:13,1:13:24.06:215,24,0	1/1:14,2:16:23.10:193,23,0	0/0:14,0:14:30.83:0,31,320	0/0:17,0:17:48.15:0,48,592	0/0:20,0:20:16.19:0,16,169	0/0:25,0:25:72.22:0,72,886	0/0:19,0:19:36.74:0,37,547	0/0:16,0:14:36.05:0,36,414	0/0:12,0:12:36.11:0,36,443	0/0:32,0:32:90.26:0,90,1100	0/1:8,1:8:19.10:131,0,19	1/1:5,1:5:12.85:111,13,0	0/1:7,0:7:0.70:57,0,1	0/1:15,1:15:15.49:15,0,86	0/0:23,0:23:57.18:0,57,706	0/0:13,0:13:39.11:0,39,470	0/0:19,0:18:54.17:0,54,668
chr10	76205457	.	A	AAG	656.96	PASS	AB=0.895;AC=7;AF=0.125;AN=56;BaseQRankSum=7.842;DP=468;FS=16.562;HRun=0;HaplotypeScore=87.4402;InbreedingCoeff=-0.1532;MQ=46.89;MQ0=17;MQRankSum=-7.680;QD=8.32;ReadPosRankSum=-0.662;VQSLOD=1.7464;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:18:4.24:4,0,255	0/0:6,0:6:18.06:0,18,293	0/0:18,0:6:12.01:0,12,136	0/0:9,0:2:6.02:0,6,98	0/0:22,0:20:57.19:0,57,921	0/0:27,0:27:76.96:0,77,1263	0/0:20,0:18:49.72:0,50,769	0/0:32,0:30:85.52:0,86,1300	0/1:8,0:8:83.64:132,0,84	0/0:17,0:17:51.17:0,51,829	0/0:13,0:13:39.12:0,39,610	0/1:9,4:12:99:248,0,120	0/1:13,1:14:99:186,0,114	0/0:14,0:14:38.50:0,39,475	0/0:17,0:17:51.16:0,51,787	0/0:21,0:21:18.04:0,18,266	0/0:25,0:25:72.25:0,72,1173	0/0:18,0:18:48:0,48,741	0/0:16,0:14:39.13:0,39,609	0/0:12,0:12:36.12:0,36,586	0/0:32,0:32:90.29:0,90,1441	0/1:7,2:8:65.65:120,0,66	0/1:6,1:6:42.27:62,0,42	0/1:6,1:7:30.12:30,0,87	0/0:16,0:15:1.32:0,1,122	0/0:21,0:21:63.16:0,63,975	0/0:14,0:14:39.12:0,39,610	0/0:19,0:18:54.18:0,54,879
chr10	76207490	.	T	TG	12432.24	PASS	AB=0.846;AC=53;AF=0.946;AN=56;BaseQRankSum=-3.924;DP=654;FS=2.967;HRun=4;HaplotypeScore=111.1933;InbreedingCoeff=0.5682;MQ=76.02;MQ0=0;MQRankSum=-7.484;QD=19.40;ReadPosRankSum=5.515;VQSLOD=3.7132;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:41:99:836,105,0	1/1:4,0:4:11.96:94,12,0	0/0:13,0:13:8.03:0,8,267	0/1:18,4:22:74.97:75,0,288	1/1:18,0:18:47.85:375,48,0	1/1:25,0:25:62.82:504,63,0	1/1:23,0:23:62.77:492,63,0	1/1:28,0:28:69.37:434,69,0	1/1:26,0:26:74.72:575,75,0	1/1:28,0:28:76.92:499,77,0	1/1:15,0:15:29.92:241,30,0	1/1:25,0:25:68.77:544,69,0	1/1:28,0:28:68.63:534,69,0	1/1:16,0:16:35.87:277,36,0	1/1:29,0:29:80.71:625,81,0	1/1:19,0:19:50.83:398,51,0	1/1:22,0:22:56.86:465,57,0	1/1:26,0:25:68.75:535,69,0	1/1:20,0:20:52.25:341,52,0	1/1:29,0:29:74.77:595,75,0	1/1:30,0:30:74.77:592,75,0	1/1:24,0:24:59.80:465,60,0	1/1:16,0:16:41.85:323,42,0	1/1:28,0:28:71.76:558,72,0	1/1:21,0:21:53.78:410,54,0	1/1:30,0:30:88.83:616,89,0	1/1:31,0:31:77.76:613,78,0	1/1:17,0:17:50.89:415,51,0
chr10	76207491	.	G	GT	26508.45	PASS	AB=0.782;AC=54;AF=0.964;AN=56;BaseQRankSum=-7.240;DP=660;FS=1.872;HRun=1;HaplotypeScore=61.3001;InbreedingCoeff=-0.0382;MQ=77.17;MQ0=0;MQRankSum=-7.504;QD=40.16;ReadPosRankSum=5.163;VQSLOD=5.2147;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,40:41:99:1677,105,0	1/1:0,4:4:12.04:192,12,0	0/1:10,5:15:99:108,0,197	0/1:17,5:22:99:369,0,201	1/1:0,18:18:51.11:785,51,0	1/1:0,25:25:63.21:1006,63,0	1/1:0,24:24:63.21:1006,63,0	1/1:0,26:26:78.23:1113,78,0	1/1:0,26:26:75.26:1198,75,0	1/1:0,28:28:84.25:1296,84,0	1/1:0,14:14:30.10:479,30,0	1/1:0,25:25:69.24:1102,69,0	1/1:0,28:28:69.23:1102,69,0	1/1:1,17:18:36.02:575,36,0	1/1:0,29:29:81.28:1294,81,0	1/1:0,20:20:51.17:814,51,0	1/1:0,22:22:57.19:908,57,0	1/1:0,26:25:69.24:1102,69,0	1/1:0,20:20:60.17:874,60,0	1/1:0,28:29:75.25:1184,75,0	1/1:0,31:31:75.26:1198,75,0	1/1:0,24:24:60.20:959,60,0	1/1:0,16:16:42.14:671,42,0	1/1:0,29:29:72.25:1150,72,0	1/1:0,21:21:54.18:863,54,0	1/1:1,30:31:90.31:1424,90,0	1/1:0,31:31:78.27:1246,78,0	1/1:0,17:17:51.17:814,51,0
chr10	76209952	.	A	AATTGT	1594.23	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.606;DP=634;FS=1.827;HRun=0;HaplotypeScore=113.6066;InbreedingCoeff=0.9976;MQ=79.59;MQ0=0;MQRankSum=-3.892;QD=59.05;ReadPosRankSum=0.752;VQSLOD=4.4972;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:27:60.12:1689,60,0	0/0:9,0:9:27.09:0,27,586	0/0:26,0:26:69.24:0,69,1379	0/0:12,0:12:33.09:0,33,654	0/0:36,0:36:99:0,99,2094	0/0:18,0:18:51.17:0,51,1091	0/0:14,0:14:42.14:0,42,912	0/0:21,0:21:60.20:0,60,1224	0/0:21,0:21:63.17:0,63,1209	0/0:28,0:28:81.28:0,81,1706	0/0:27,0:27:69.24:0,69,1498	0/0:33,0:33:90.29:0,90,1892	0/0:15,0:15:42.14:0,42,848	0/0:18,0:18:54.19:0,54,1157	0/0:26,0:26:78.27:0,78,1693	0/0:22,0:22:66.23:0,66,1433	0/0:20,0:20:57.15:0,57,1193	0/0:9,0:9:27.09:0,27,568	0/0:25,0:24:75.25:0,75,1538	0/0:36,0:36:96.33:0,96,1970	0/0:30,0:29:84.29:0,84,1808	0/0:25,0:25:69.24:0,69,1451	0/0:19,0:19:51.14:0,51,1025	0/0:15,0:15:42.13:0,42,808	0/0:23,0:23:60.20:0,60,1219	0/0:34,0:34:99:0,102,2215	0/0:28,0:28:75.24:0,75,1525	0/0:17,0:17:51.18:0,51,1106
chr10	76211893	.	GAAA	G	1055.87	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.970;DP=506;FS=2.711;HRun=18;HaplotypeScore=75.7356;InbreedingCoeff=0.9040;MQ=66.61;MQ0=13;MQRankSum=-0.708;QD=9.26;ReadPosRankSum=7.652;VQSLOD=-0.3513;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,2:30:53.87:351,54,0	0/0:7,0:7:21.05:0,21,301	0/0:31,0:10:6.48:0,6,80	0/0:29,0:10:10.12:0,10,104	0/0:24,0:24:50.06:0,50,560	0/0:13,0:15:33.06:0,33,453	0/0:15,0:15:24.03:0,24,318	0/0:14,0:15:24.06:0,24,342	1/1:16,7:23:25.67:262,26,0	0/0:13,0:17:30.08:0,30,417	0/0:16,0:15:29.54:0,30,370	1/1:4,4:8:11.81:118,12,0	1/1:4,3:6:5.85:59,6,0	0/0:18,0:18:33:0,33,395	0/0:13,0:13:18.05:0,18,256	0/0:17,0:19:48.05:0,48,620	0/0:31,0:35:73.88:0,74,944	0/0:17,0:17:41.13:0,41,588	0/0:28,0:30:72.18:0,72,942	0/0:21,0:21:43.97:0,44,504	0/0:13,0:14:32.91:0,33,362	1/1:7,7:13:11.24:141,11,0	1/1:7,5:12:5.22:58,5,0	1/1:8,11:18:26.60:253,27,0	0/0:2,0:9:12.02:0,12,158	0/0:9,0:13:27.03:0,27,324	0/0:21,0:22:51.08:0,51,687	0/0:6,0:7:12.02:0,12,164
chr10	76215255	.	T	TG	496.22	PASS	AB=0.954;AC=37;AF=0.740;AN=50;BaseQRankSum=-1.251;DP=244;FS=3.100;HRun=0;HaplotypeScore=67.7898;InbreedingCoeff=0.1651;MQ=21.12;MQ0=86;MQRankSum=0.610;QD=2.46;ReadPosRankSum=-0.914;VQSLOD=2.1255;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:7:2.22:5,0,2	./.	./.	./.	0/1:9,0:3:0:1,0,0	1/1:10,1:6:7.03:52,7,0	1/1:5,0:4:3.90:9,4,0	1/1:8,1:3:0.50:37,1,0	1/1:10,2:8:10.31:93,10,0	0/0:8,0:4:6.84:0,7,20	1/1:11,0:1:0.47:1,0,0	1/1:6,1:6:10.25:68,10,0	1/1:4,0:3:0.38:2,0,0	0/1:8,1:8:4.01:40,0,4	0/1:7,0:4:0.63:1,0,1	1/1:7,1:6:4.89:15,5,0	1/1:7,3:9:5.43:121,5,0	0/1:9,1:4:33.44:38,0,33	0/1:13,1:3:3.34:25,0,3	1/1:14,0:3:3.27:7,3,0	1/1:3,2:3:4.88:42,5,0	1/1:10,0:5:1.36:5,1,0	1/1:2,0:1:0.47:1,0,0	0/0:8,0:6:3.41:0,3,10	1/1:10,0:5:1.32:4,1,0	0/1:14,1:6:9.89:30,0,10	1/1:11,0:8:0.58:7,1,0	0/0:8,0:3:1.04:0,1,4
chr10	76215263	.	T	TG	2235.12	PASS	AB=0.740;AC=44;AF=0.846;AN=52;BaseQRankSum=4.948;DP=253;FS=18.616;HRun=0;HaplotypeScore=65.6889;InbreedingCoeff=-0.0889;MQ=22.34;MQ0=69;MQRankSum=-0.689;QD=9.43;ReadPosRankSum=3.135;VQSLOD=2.2577;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,8:9:20.87:187,21,0	0/1:2,0:1:0:0,0,0	./.	./.	1/1:3,7:3:1.77:3,2,0	1/1:5,5:6:14.71:123,15,0	1/1:1,4:4:12.02:115,12,0	0/1:7,2:3:9.19:31,0,9	0/1:5,8:9:13.92:149,0,14	1/1:4,5:6:14.97:123,15,0	0/1:3,7:2:8.95:22,0,9	1/1:1,5:6:13.26:118,13,0	1/1:1,3:4:6.48:57,6,0	1/1:1,7:8:4.33:185,4,0	1/1:2,6:6:9.46:78,9,0	1/1:2,7:7:15.43:132,15,0	0/1:4,6:9:32.79:119,0,33	0/1:8,1:3:19.54:20,0,52	1/1:11,3:3:5.99:48,6,0	1/1:9,7:4:9.01:87,9,0	0/1:4,3:4:16.87:46,0,17	1/1:1,8:5:10.78:88,11,0	1/1:2,1:2:3:28,3,0	1/1:0,8:6:14.39:98,14,0	1/1:5,6:6:12.41:106,12,0	0/1:7,7:6:1.44:99,0,1	1/1:6,8:11:26.84:221,27,0	1/1:5,3:3:8.98:74,9,0
chr10	76215265	.	T	TGTTG	5766.19	PASS	AB=0.859;AC=50;AF=0.962;AN=52;BaseQRankSum=-0.240;DP=248;FS=14.680;HRun=0;HaplotypeScore=66.1828;InbreedingCoeff=-0.0695;MQ=23.56;MQ0=64;MQRankSum=-2.137;QD=24.85;ReadPosRankSum=0.240;VQSLOD=2.8655;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,8:9:21.07:384,21,0	1/1:2,0:1:2.94:18,3,0	./.	./.	1/1:4,7:4:6.02:84,6,0	1/1:5,5:6:18.05:292,18,0	1/1:1,4:4:12.04:211,12,0	0/1:7,2:3:3.72:105,0,4	1/1:5,7:9:20.43:326,20,0	1/1:4,5:6:15.05:289,15,0	1/1:3,7:2:6.01:80,6,0	1/1:0,5:5:15.05:269,15,0	1/1:1,3:4:11.99:173,12,0	1/1:1,6:8:21.03:348,21,0	1/1:2,6:6:12.04:188,12,0	1/1:2,7:7:18.06:320,18,0	1/1:5,6:10:24.08:403,24,0	0/1:8,1:3:53.58:69,0,54	1/1:9,3:2:6.02:123,6,0	1/1:8,7:4:9.03:166,9,0	1/1:3,2:4:11.81:130,12,0	1/1:1,8:6:15.05:253,15,0	1/1:2,1:2:3.01:54,3,0	1/1:0,8:6:15.05:224,15,0	1/1:5,6:6:15.05:255,15,0	1/1:7,7:6:17.55:306,18,0	1/1:6,8:11:30.09:520,30,0	1/1:3,3:3:9.03:176,9,0
chr10	76215268	.	CT	C	2399.71	PASS	AB=0.875;AC=51;AF=0.981;AN=52;BaseQRankSum=0.840;DP=234;FS=14.129;HRun=8;HaplotypeScore=56.4718;InbreedingCoeff=-0.0663;MQ=24.57;MQ0=58;MQRankSum=-1.195;QD=10.86;ReadPosRankSum=0.107;VQSLOD=0.8252;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:9:20.63:154,21,0	1/1:1,1:1:3:29,3,0	./.	./.	1/1:1,10:4:3:28,3,0	1/1:4,6:6:14.98:126,15,0	1/1:1,4:4:11.97:96,12,0	1/1:6,2:2:6:53,6,0	1/1:2,8:7:17.97:147,18,0	1/1:0,10:7:18:159,18,0	1/1:1,9:2:5.99:52,6,0	1/1:1,4:5:11.92:97,12,0	1/1:0,5:5:8.99:77,9,0	1/1:1,6:7:13.81:137,14,0	1/1:0,8:6:8.95:71,9,0	1/1:0,8:7:14.98:126,15,0	1/1:2,6:7:17.81:136,18,0	0/1:6,1:2:19.93:20,0,30	1/1:7,4:2:5.99:51,6,0	1/1:5,10:4:8.97:69,9,0	1/1:1,4:3:8.99:77,9,0	1/1:0,9:6:11.98:99,12,0	1/1:0,3:2:2.99:23,3,0	1/1:1,8:7:14.83:107,15,0	1/1:3,8:6:11.98:101,12,0	1/1:6,7:5:14.98:124,15,0	1/1:2,12:11:29.98:258,30,0	1/1:3,3:3:8.99:74,9,0
chr10	76216640	.	T	TA	1109.26	PASS	AB=0.862;AC=12;AF=0.214;AN=56;BaseQRankSum=-6.791;DP=483;FS=0.597;HRun=10;HaplotypeScore=51.0237;InbreedingCoeff=0.7848;MQ=68.10;MQ0=0;MQRankSum=0.814;QD=13.36;ReadPosRankSum=1.541;VQSLOD=3.3131;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:33.90:0,34,420	0/1:11,2:13:2.03:2,0,192	0/0:15,0:13:12.76:0,13,94	0/0:14,0:14:8.05:0,8,70	0/0:31,0:31:65.88:0,66,538	0/0:29,0:29:77.89:0,78,640	0/0:13,0:13:26.94:0,27,218	0/0:26,0:26:56.87:0,57,465	1/1:2,13:15:30.08:320,30,0	0/0:29,0:29:68.89:0,69,566	0/0:20,0:22:58:0,58,455	1/1:2,14:16:11.50:327,12,0	1/1:2,7:9:18.05:192,18,0	0/0:11,0:11:32.96:0,33,271	0/0:12,0:12:29.95:0,30,243	0/0:14,0:14:32.93:0,33,268	0/0:18,0:18:50.90:0,51,414	0/0:12,0:12:27.44:0,27,222	0/0:19,0:19:35.93:0,36,294	0/0:31,0:31:74.90:0,75,616	0/0:11,0:11:29.96:0,30,246	0/1:5,1:6:18.62:26,0,19	1/1:1,15:16:26.94:288,27,0	1/1:3,5:8:12.03:128,12,0	0/0:25,0:25:71.92:0,72,591	0/0:19,0:19:41.72:0,42,330	0/0:22,0:22:28.18:0,28,393	0/0:6,0:6:11.98:0,12,98
chr10	76218050	.	AT	A	1502.39	PASS	AB=0.889;AC=15;AF=0.268;AN=56;BaseQRankSum=9.412;DP=393;FS=1.113;HRun=10;HaplotypeScore=38.5437;InbreedingCoeff=0.8661;MQ=71.05;MQ0=0;MQRankSum=1.903;QD=17.07;ReadPosRankSum=1.571;VQSLOD=3.7484;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:20:47.98:417,48,0	0/0:3,0:3:9.02:0,9,100	0/0:7,0:6:8.95:0,9,70	0/0:6,0:6:14.36:0,14,124	0/0:24,0:24:57.15:0,57,623	0/0:19,0:19:48.12:0,48,523	0/0:5,0:5:15.04:0,15,166	0/0:31,0:31:81.20:0,81,881	1/1:2,9:11:26.99:234,27,0	0/0:25,0:25:66.17:0,66,721	0/0:20,0:20:51.12:0,51,554	1/1:0,8:8:21:182,21,0	1/1:1,11:12:29.99:260,30,0	0/1:7,1:8:8.01:8,0,148	0/0:12,0:12:27.07:0,27,299	0/0:9,0:9:21.06:0,21,232	0/0:29,0:29:84.21:0,84,920	0/0:6,0:6:9.02:0,9,100	0/0:13,0:13:30.07:0,30,326	0/0:24,3:27:7.28:0,7,601	0/0:7,0:7:18.03:0,18,190	1/1:1,6:7:15:130,15,0	1/1:1,11:12:29.98:259,30,0	1/1:0,10:10:24:208,24,0	0/0:15,0:16:47.96:0,48,512	0/0:18,0:18:51.12:0,51,548	0/0:16,0:16:48.13:0,48,528	0/0:12,0:12:33.09:0,33,365
chr10	76218575	.	C	CT	618.89	PASS	AB=0.851;AC=16;AF=0.286;AN=56;BaseQRankSum=-0.600;DP=502;FS=0.650;HRun=13;HaplotypeScore=60.8724;InbreedingCoeff=0.4398;MQ=74.10;MQ0=1;MQRankSum=0.029;QD=4.48;ReadPosRankSum=0.400;VQSLOD=1.1199;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,1:17:17.04:86,17,0	0/0:9,0:9:17.82:0,18,123	0/0:19,0:10:4.66:0,5,25	0/1:11,0:11:2.73:3,0,31	0/0:25,0:27:19.55:0,20,240	0/0:20,1:20:10.69:0,11,219	0/1:6,2:8:12.99:13,0,67	0/0:24,1:26:8.59:0,9,252	1/1:4,7:11:9.01:84,9,0	0/0:30,1:32:20.90:0,21,284	0/0:17,1:19:28.58:0,29,189	1/1:0,11:11:15.02:139,15,0	1/1:5,7:12:12:107,12,0	0/1:10,0:10:9.04:9,0,67	0/1:12,0:13:4.74:5,0,89	0/0:21,1:22:0.61:0,1,142	0/0:27,0:30:14.72:0,15,273	0/0:13,0:13:18.47:0,18,117	0/0:27,0:27:26.14:0,26,302	0/0:19,0:20:7.78:0,8,173	0/0:6,0:7:7.97:0,8,46	0/1:6,9:14:2.57:118,0,3	0/1:9,8:17:40.32:89,0,40	1/1:3,10:13:15.02:139,15,0	0/0:20,0:20:34.62:0,35,232	0/0:32,0:32:25.46:0,25,321	0/0:19,0:19:7.13:0,7,166	0/0:19,0:20:37.58:0,38,247
chr10	76218745	.	T	TTC	176.24	PASS	AB=0.953;AC=14;AF=0.292;AN=48;BaseQRankSum=2.385;DP=564;FS=0.000;HRun=0;HaplotypeScore=119.1948;InbreedingCoeff=0.0969;MQ=62.65;MQ0=6;MQRankSum=0.333;QD=0.76;ReadPosRankSum=0.871;VQSLOD=2.2203;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:32:21.10:21,0,34	./.	./.	./.	0/0:17,0:17:11.24:0,11,106	0/0:19,0:18:13.06:0,13,162	0/0:19,0:19:19.27:0,19,190	0/0:39,0:38:2.59:0,3,29	1/1:20,0:18:3.01:37,3,0	0/1:30,0:30:4.90:5,0,287	0/1:15,0:16:36.53:37,0,147	0/0:22,0:21:2.50:0,2,9	./.	0/1:10,7:17:21.02:123,0,21	0/1:24,1:25:21.19:21,0,188	0/0:19,0:19:27.21:0,27,260	0/1:23,0:23:0.96:1,0,138	0/0:13,0:14:5.80:0,6,47	0/0:24,0:23:15:0,15,164	0/0:19,0:19:12.59:0,13,150	0/0:23,0:24:27.48:0,27,242	0/1:10,0:10:0.05:0,0,0	1/1:18,0:18:6.42:30,6,0	1/1:18,0:18:0.61:2,1,0	0/0:19,0:20:35.88:0,36,357	0/0:19,0:20:32.88:0,33,324	0/1:19,1:20:27.42:27,0,157	0/0:17,0:16:11.86:0,12,113
chr10	76218783	.	CCT	C	508.51	PASS	AB=0.854;AC=10;AF=0.179;AN=56;BaseQRankSum=4.500;DP=546;FS=33.934;HRun=0;HaplotypeScore=108.7494;InbreedingCoeff=-0.2289;MQ=54.92;MQ0=18;MQRankSum=-1.828;QD=2.25;ReadPosRankSum=-0.731;VQSLOD=0.4330;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,17:31:99:120,0,209	0/0:2,0:2:6.02:0,6,103	0/1:41,1:10:17.40:17,0,207	0/0:46,1:11:6.88:0,7,118	0/0:14,0:14:5.92:0,6,528	0/0:17,0:16:34.85:0,35,616	0/0:19,0:19:5.34:0,5,675	0/0:24,0:20:58.14:0,58,802	0/1:10,6:14:36.37:36,0,198	0/1:23,3:25:44.58:45,0,900	0/1:16,0:16:83.89:84,0,482	0/0:6,9:14:11.72:0,12,151	0/1:6,7:12:12.59:13,0,191	0/0:16,0:16:36.07:0,36,546	0/0:12,0:11:35.30:0,35,476	0/0:18,0:18:47.14:0,47,707	0/0:20,1:20:11.08:0,11,590	0/0:15,0:15:41.33:0,41,614	0/0:13,0:13:37.29:0,37,559	0/1:17,0:17:2.84:3,0,525	0/1:27,0:27:6.13:6,0,793	0/0:4,3:7:5.67:0,6,40	0/1:19,3:21:18.06:211,0,18	0/1:11,5:16:37.18:110,0,37	0/0:23,0:23:23.97:0,24,806	0/0:27,0:27:62.68:0,63,1000	0/0:17,0:16:25.74:0,26,614	0/0:11,0:11:29.75:0,30,467
chr10	76218801	.	C	CTGTGTG	912.16	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=9.777;DP=615;FS=0.000;HRun=0;HaplotypeScore=170.2213;InbreedingCoeff=0.7749;MQ=60.56;MQ0=16;MQRankSum=-8.916;QD=7.86;ReadPosRankSum=-0.731;VQSLOD=1.7865;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:39:409,39,0	0/0:2,0:2:6.02:0,6,138	0/0:64,0:19:22.76:0,23,621	0/0:78,0:27:20.26:0,20,680	0/0:12,0:12:36.11:0,36,779	0/0:19,0:18:45.13:0,45,964	0/0:21,0:21:51.14:0,51,1056	0/0:27,0:25:66.22:0,66,1422	1/1:18,0:16:25.72:228,26,0	0/0:20,0:19:54.19:0,54,1219	0/0:16,0:16:33.11:0,33,733	1/1:13,0:12:10.21:74,10,0	1/1:13,0:12:24.67:247,25,0	0/0:16,0:16:39.10:0,39,848	0/0:13,0:12:33.08:0,33,668	0/0:16,0:16:39.12:0,39,838	0/0:26,0:26:69.05:0,69,1419	0/0:18,0:18:51.17:0,51,1161	0/0:20,0:20:60.16:0,60,1238	0/0:15,0:15:36.11:0,36,765	0/0:30,0:30:72.25:0,72,1610	1/1:9,0:9:5.35:68,5,0	0/0:7,15:21:1.64:0,2,4	1/1:16,0:17:1.43:12,1,0	0/0:22,0:22:57.18:0,57,1250	0/0:31,0:31:81.27:0,81,1744	0/1:19,0:18:45.98:46,0,998	0/0:10,0:10:24.08:0,24,550
chr10	76219920	.	GCTATA	G	8066.54	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=16.298;DP=622;FS=0.754;HRun=0;HaplotypeScore=138.3159;InbreedingCoeff=0.9965;MQ=80.84;MQ0=0;MQRankSum=-17.124;QD=50.73;ReadPosRankSum=1.553;VQSLOD=4.7686;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:78.27:1690,78,0	0/0:10,0:10:30.10:0,30,946	0/0:20,0:20:53.40:0,53,1489	0/0:19,0:19:53.97:0,54,1371	0/0:14,0:14:42.14:0,42,1300	0/0:12,0:12:36.12:0,36,1116	0/0:28,0:28:81.28:0,81,2524	0/0:25,0:25:75.25:0,75,2290	1/1:0,30:30:78.27:1691,78,0	0/0:24,0:24:72.25:0,72,2260	0/0:10,0:10:30.10:0,30,921	1/1:0,23:23:60.21:1302,60,0	1/1:1,25:26:69.24:1468,69,0	0/0:28,0:28:78.27:0,78,2470	0/0:34,0:34:96.33:0,96,2992	0/0:27,1:28:16.17:0,16,2337	0/0:35,0:35:99:0,105,3273	0/0:27,0:27:81.28:0,81,2570	0/0:18,0:18:51.16:0,51,1519	0/0:18,0:18:51.18:0,51,1614	0/0:52,0:52:99:0,154,4808	1/1:1,10:11:21.06:435,21,0	1/1:1,9:10:27.09:584,27,0	1/1:1,25:26:41.53:896,42,0	0/0:13,0:13:39.13:0,39,1227	0/0:18,0:18:48.15:0,48,1453	0/0:20,0:20:60.21:0,60,1873	0/0:10,0:10:30.10:0,30,951
chr10	76220604	.	TAATAATCAGTAAACAAAA	T	8102.58	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=12.405;DP=702;FS=1.067;HRun=0;HaplotypeScore=324.9716;InbreedingCoeff=0.9978;MQ=78.63;MQ0=0;MQRankSum=-11.577;QD=55.12;ReadPosRankSum=-0.567;VQSLOD=3.3532;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,13:24:20.90:898,21,0	0/0:11,0:11:27.09:0,27,1897	0/0:25,0:25:30.10:0,30,1452	0/0:21,0:21:29.13:0,29,1104	0/0:37,0:37:99:0,102,7415	0/0:23,0:23:51.18:0,51,3911	0/0:23,0:23:63.20:0,63,4408	0/0:27,0:27:63.20:0,63,2989	1/1:9,11:20:24.08:1163,24,0	0/0:37,0:37:78.27:0,78,5421	0/0:27,0:27:69.24:0,69,5146	1/1:6,16:22:30.10:1469,30,0	1/1:6,16:22:30.10:1436,30,0	0/0:23,0:23:57.20:0,57,4599	0/0:26,0:26:60.21:0,60,4847	0/0:26,0:26:51.18:0,51,3999	0/0:18,0:18:39.11:0,39,2553	0/0:15,0:15:39.13:0,39,3052	0/0:31,0:31:54.19:0,54,3221	0/0:41,0:41:99:0,102,7923	0/0:16,0:16:33.11:0,33,2268	1/1:12,18:30:44.98:1801,45,0	1/1:14,15:29:29:1336,29,0	./.	0/0:28,0:28:70.48:0,70,5233	0/0:35,0:35:87.30:0,87,6694	0/0:29,0:29:72.25:0,72,5803	0/0:19,0:19:48.16:0,48,3430
chr10	76222972	.	T	TAAA	437.11	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.086;DP=310;FS=1.078;HRun=0;HaplotypeScore=53.0067;InbreedingCoeff=0.6688;MQ=68.33;MQ0=2;MQRankSum=-1.400;QD=24.28;ReadPosRankSum=0.449;VQSLOD=2.9674;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,11:18:35.14:532,35,0	0/0:4,0:4:12.04:0,12,224	0/0:13,0:5:14.90:0,15,123	0/0:13,0:6:7.74:0,8,147	0/0:10,0:10:27.09:0,27,486	0/0:17,0:17:51.17:0,51,947	0/0:3,0:3:9.03:0,9,168	0/0:36,0:36:99:0,102,1710	0/0:8,0:8:24:0,24,396	0/0:14,0:14:42.12:0,42,716	0/0:11,0:11:33.06:0,33,487	0/0:7,0:7:21.07:0,21,371	0/0:6,0:6:18.06:0,18,317	0/0:6,0:6:18.05:0,18,298	0/0:4,0:4:12.04:0,12,217	0/0:4,0:4:12.03:0,12,194	0/0:20,0:20:60.16:0,60,986	0/0:9,0:9:27.09:0,27,496	0/0:23,0:23:66.21:0,66,1137	0/0:10,0:10:30.10:0,30,550	0/0:2,0:2:6.02:0,6,112	0/0:5,0:5:15.05:0,15,263	0/0:4,0:4:12.01:0,12,185	0/0:3,0:3:9:0,9,132	0/0:9,0:9:27.09:0,27,498	0/0:19,0:19:57.16:0,57,930	0/0:19,0:19:57.11:0,57,885	0/0:12,0:12:36.11:0,36,634
chr10	76223248	.	T	TACACACACACACACAC	5493.21	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=1.485;DP=684;FS=5.458;HRun=0;HaplotypeScore=285.2057;InbreedingCoeff=0.8413;MQ=66.59;MQ0=7;MQRankSum=-7.419;QD=26.93;ReadPosRankSum=-2.786;VQSLOD=3.0154;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:5.05:215,5,0	0/0:9,0:10:24.06:0,24,752	0/1:52,0:27:9.32:9,0,462	0/0:45,0:29:19.04:0,19,413	0/0:13,0:18:45.15:0,45,1555	0/0:12,0:15:39.06:0,39,1255	0/0:27,0:30:63.12:0,63,2244	0/0:35,0:35:58.46:0,58,1641	1/1:17,8:24:17.94:1144,18,0	0/0:24,0:26:66.22:0,66,2379	0/0:15,0:15:38.90:0,39,1372	1/1:21,8:30:14.96:939,15,0	1/1:12,9:24:15.05:1066,15,0	0/0:27,0:28:60.18:0,60,2064	0/0:21,0:21:48.15:0,48,1956	0/0:15,0:16:36.12:0,36,1334	0/0:28,0:30:43.03:0,43,2866	0/0:19,0:19:42.14:0,42,1842	0/0:19,0:22:33.03:0,33,737	0/0:18,0:18:39.12:0,39,1326	0/0:57,0:58:72.33:0,72,4411	1/1:18,1:18:12.04:631,12,0	1/1:8,0:8:6.02:436,6,0	1/1:36,3:38:17.55:1053,18,0	0/0:10,0:12:27.08:0,27,1041	0/0:21,0:26:57.19:0,57,2061	0/0:26,0:29:60.18:0,60,2423	0/0:6,0:6:6:0,6,156
chr10	76223354	.	GCA	G	1422.14	PASS	AB=0.588;AC=11;AF=0.196;AN=56;BaseQRankSum=7.668;DP=693;FS=3.457;HRun=0;HaplotypeScore=99.9852;InbreedingCoeff=0.8335;MQ=55.37;MQ0=15;MQRankSum=5.284;QD=10.09;ReadPosRankSum=1.801;VQSLOD=3.2515;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:19.96:0,20,145	0/0:11,0:11:5.73:0,6,309	0/0:35,0:11:24.02:0,24,238	0/0:43,0:22:26.15:0,26,248	0/0:20,0:20:36.03:0,36,405	0/0:24,0:23:19.27:0,19,575	0/0:27,0:27:48.57:0,49,604	0/0:37,0:37:74.96:0,75,680	1/1:22,3:24:22.67:384,23,0	0/0:30,0:30:83.34:0,83,1031	0/0:11,0:11:20.72:0,21,335	1/1:6,18:23:6.48:78,6,0	1/1:13,3:15:36:338,36,0	0/0:25,0:24:47.50:0,47,824	0/0:23,0:23:25.18:0,25,584	0/0:21,0:21:32.98:0,33,330	0/0:34,0:34:62.67:0,63,757	0/0:19,0:19:37.35:0,37,532	0/0:16,0:14:27.02:0,27,283	0/0:14,0:13:27.03:0,27,348	0/0:56,0:55:61.58:0,62,1162	1/1:6,19:23:33.10:408,33,0	0/1:6,14:20:19.05:136,0,19	1/1:9,22:31:21.02:251,21,0	0/0:9,0:9:15.04:0,15,195	0/0:29,0:28:75:0,75,921	0/0:36,0:35:59.47:0,59,1018	0/0:11,0:11:18.91:0,19,362
chr10	76223365	.	C	CAG	295.08	PASS	AB=0.792;AC=6;AF=0.107;AN=56;BaseQRankSum=-0.967;DP=688;FS=2.589;HRun=0;HaplotypeScore=110.3278;InbreedingCoeff=0.0045;MQ=56.43;MQ0=17;MQRankSum=2.113;QD=1.90;ReadPosRankSum=0.694;VQSLOD=2.2527;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:18:0:0,0,0	0/0:8,0:12:29.40:0,29,248	0/0:36,0:16:11.51:0,12,97	0/0:43,0:20:8.71:0,9,60	0/1:9,8:18:15.47:190,0,15	0/0:27,0:26:32.96:0,33,311	0/0:22,0:24:32.89:0,33,331	0/0:35,0:35:26.73:0,27,223	0/0:25,0:24:12.18:0,12,85	0/0:30,0:30:42.04:0,42,445	0/0:10,0:11:17.85:0,18,164	0/0:20,0:20:5.73:0,6,41	0/0:15,0:14:20.39:0,20,122	0/0:22,1:24:30.78:0,31,439	0/0:18,0:22:38.59:0,39,367	0/1:11,13:24:31.37:122,0,31	0/0:32,0:33:35.76:0,36,360	0/0:17,0:19:29.70:0,30,266	0/0:15,0:14:8.09:0,8,83	0/0:12,0:12:17.62:0,18,186	0/1:49,1:54:4.37:4,0,316	0/0:27,0:25:38.32:0,38,260	0/0:18,0:18:23.72:0,24,168	0/0:32,0:32:19.49:0,19,217	0/1:4,6:10:55:79,0,55	0/1:27,1:28:6.57:7,0,332	0/0:34,0:37:56.62:0,57,558	0/0:10,0:10:11.86:0,12,114
chr10	76223635	.	T	TTAAA	834.50	PASS	AC=10;AF=0.250;AN=40;BaseQRankSum=1.291;DP=311;FS=0.992;HRun=0;HaplotypeScore=49.2359;InbreedingCoeff=0.6786;MQ=70.81;MQ0=1;MQRankSum=-3.791;QD=10.30;ReadPosRankSum=-2.841;VQSLOD=1.5923;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,10:22:21.07:491,21,0	./.	./.	./.	0/0:5,0:5:3.01:0,3,46	0/0:21,0:21:27.09:0,27,416	./.	1/1:33,0:33:20.89:207,21,0	1/1:5,0:5:5.95:42,6,0	0/0:10,0:10:6.02:0,6,92	0/0:12,0:12:9.03:0,9,139	1/1:4,1:10:9.03:147,9,0	1/1:8,0:10:6.02:88,6,0	0/0:6,0:6:3.01:0,3,46	0/0:6,0:6:2.99:0,3,24	0/0:5,0:5:9.01:0,9,116	0/0:30,0:30:48.12:0,48,691	0/0:13,0:13:15.05:0,15,231	0/0:16,0:16:6.02:0,6,92	0/0:14,0:14:15.03:0,15,209	./.	./.	./.	./.	0/0:9,0:9:9.03:0,9,139	0/0:8,0:8:6.02:0,6,92	0/0:19,0:19:21.07:0,21,323	0/0:7,0:7:8.99:0,9,93
chr10	76224331	.	C	CAG	4792.43	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-1.007;DP=562;FS=0.000;HRun=0;HaplotypeScore=72.8809;InbreedingCoeff=0.9926;MQ=70.11;MQ0=0;MQRankSum=-1.658;QD=41.67;ReadPosRankSum=1.151;VQSLOD=6.1065;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,126,1603	0/0:6,0:6:18.05:0,18,220	0/0:26,0:25:60.19:0,60,780	0/0:21,0:21:54.17:0,54,690	0/0:13,0:13:39.11:0,39,493	0/0:12,0:12:30.10:0,30,386	0/0:27,0:27:69.22:0,69,897	0/0:24,0:24:63.20:0,63,818	1/1:3,24:27:69.24:1172,69,0	0/0:20,0:20:54.18:0,54,700	0/0:8,0:8:21.07:0,21,273	1/1:3,19:22:54.18:917,54,0	1/1:2,22:25:63.22:1071,63,0	0/0:18,0:18:48.16:0,48,624	0/0:28,0:28:78.25:0,78,1010	0/0:22,0:22:66.20:0,66,844	0/0:26,0:26:72.23:0,72,935	0/0:15,0:15:42.14:0,42,546	0/0:28,0:28:66.20:0,66,843	0/0:13,0:13:33.11:0,33,429	0/0:33,0:33:87.28:0,87,1131	1/1:2,8:10:21.07:357,21,0	1/1:1,6:7:15.05:255,15,0	1/1:0,23:24:60.21:1019,60,0	0/0:9,0:9:27.09:0,27,351	0/0:27,0:27:72.22:0,72,924	0/0:12,0:12:33.11:0,33,429	0/0:10,0:10:24.08:0,24,312
chr10	76224596	.	CA	C	1351.19	PASS	AB=0.917;AC=16;AF=0.286;AN=56;BaseQRankSum=10.248;DP=395;FS=4.005;HRun=10;HaplotypeScore=42.7062;InbreedingCoeff=0.7574;MQ=72.47;MQ0=1;MQRankSum=-0.295;QD=13.38;ReadPosRankSum=1.498;VQSLOD=3.1403;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:68.98:599,69,0	0/0:11,0:11:27.07:0,27,298	0/1:15,0:11:1.03:1,0,139	0/0:17,0:8:4.62:0,5,92	0/0:22,0:22:56.98:0,57,607	0/0:23,0:22:63.17:0,63,697	0/0:9,0:9:27.06:0,27,291	0/0:20,0:20:51.14:0,51,564	1/1:3,5:8:11.99:104,12,0	0/0:16,0:16:42.11:0,42,461	0/0:15,0:15:27.07:0,27,297	1/1:1,7:8:17.99:156,18,0	1/1:2,4:6:5.99:52,6,0	0/0:16,0:16:44.85:0,45,469	0/0:5,0:5:15.04:0,15,166	0/0:13,1:14:4.03:0,4,264	0/0:18,0:18:42.08:0,42,447	0/0:21,0:21:51.08:0,51,540	0/0:16,0:17:38.94:0,39,412	0/0:14,0:14:33.07:0,33,351	0/0:9,0:9:24.04:0,24,246	1/1:2,6:8:17.99:156,18,0	1/1:0,14:14:38.99:339,39,0	1/1:2,5:7:12:104,12,0	0/1:8,2:10:28.05:28,0,175	0/0:22,0:22:57.15:0,57,631	0/0:13,0:13:36.07:0,36,381	0/0:10,1:12:3.86:0,4,254
chr10	76225202	.	C	CAG	760.56	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=7.819;DP=676;FS=2.497;HRun=0;HaplotypeScore=137.3364;InbreedingCoeff=0.7523;MQ=50.04;MQ0=17;MQRankSum=-3.253;QD=6.61;ReadPosRankSum=-2.859;VQSLOD=3.1791;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:9.87:0,10,67	0/0:12,0:11:21.06:0,21,271	./.	0/0:17,0:1:3.01:0,3,39	0/0:32,0:32:75.25:0,75,1011	0/0:23,0:23:57.19:0,57,780	0/0:27,0:25:26.83:0,27,482	0/0:40,0:38:95.78:0,96,1282	1/1:21,0:21:20.17:247,20,0	0/0:39,0:37:96.24:0,96,1243	0/0:20,0:19:39.11:0,39,502	1/1:21,0:21:27.05:320,27,0	1/1:3,9:14:6.02:85,6,0	0/0:23,0:23:60.15:0,60,773	0/0:27,0:26:63.21:0,63,860	0/0:13,0:13:33.11:0,33,445	0/0:28,0:28:35.17:0,35,784	0/0:25,0:25:60.40:0,60,786	0/0:22,0:20:50.98:0,51,631	0/0:28,0:28:51.06:0,51,669	0/0:37,0:37:87.24:0,87,1154	1/1:19,1:19:10.87:137,11,0	0/1:15,0:14:31.11:124,0,31	1/1:7,16:23:0.46:1,0,0	0/0:21,0:21:51.15:0,51,681	0/0:31,0:31:81.25:0,81,1083	0/0:31,0:30:87.29:0,87,1185	0/0:28,0:28:78.22:0,78,1041
chr10	76225206	.	GAC	G	474.76	PASS	AB=0.762;AC=11;AF=0.204;AN=54;BaseQRankSum=7.664;DP=673;FS=4.162;HRun=0;HaplotypeScore=139.1486;InbreedingCoeff=0.7491;MQ=49.91;MQ0=16;MQRankSum=-1.973;QD=4.02;ReadPosRankSum=-4.051;VQSLOD=1.6759;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,8:29:6.91:0,7,24	0/0:11,0:10:24.07:0,24,425	./.	0/0:13,0:1:2.99:0,3,23	0/0:32,0:32:78.10:0,78,1266	0/0:23,0:23:63.17:0,63,1081	0/0:26,0:24:29.84:0,30,708	0/0:40,0:38:99:0,114,1808	1/1:13,6:19:10.32:127,10,0	0/0:40,0:38:99:0,108,1823	0/0:20,0:19:40.03:0,40,663	1/1:12,10:22:33.09:231,33,0	1/1:13,1:14:7.53:50,8,0	0/0:23,0:23:66.21:0,66,1186	0/0:25,0:24:63.22:0,63,1161	0/0:14,0:14:39.13:0,39,730	0/0:28,0:28:52.22:0,52,1111	0/0:26,1:27:56.96:0,57,1133	0/0:23,0:21:60.09:0,60,972	0/0:27,0:27:57.15:0,57,949	0/0:38,0:38:93.09:0,93,1709	1/1:13,9:21:17.47:145,17,0	0/1:11,5:15:42.21:74,0,42	1/1:24,1:24:0.46:1,0,0	0/0:20,0:20:54.19:0,54,998	0/0:30,0:30:87.27:0,87,1522	0/0:31,0:30:90.31:0,90,1659	0/0:30,0:30:84.21:0,84,1477
chr10	76225212	.	GAC	G	458.88	PASS	AB=0.773;AC=13;AF=0.250;AN=52;BaseQRankSum=10.090;DP=667;FS=0.000;HRun=0;HaplotypeScore=149.5404;InbreedingCoeff=0.7827;MQ=50.30;MQ0=16;MQRankSum=-1.056;QD=3.08;ReadPosRankSum=-4.023;VQSLOD=1.5142;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:29:1.24:4,1,0	0/0:11,0:10:24.08:0,24,456	./.	./.	0/0:30,0:30:72.22:0,72,1308	0/0:21,0:21:60.16:0,60,1059	0/0:27,0:25:42.11:0,42,732	0/0:38,0:36:99:0,99,1614	1/1:14,6:20:12.08:151,12,0	0/0:41,0:39:99:0,113,1929	0/0:20,0:19:39.08:0,39,672	1/1:10,10:20:27.09:182,27,0	1/1:14,1:15:7.53:50,8,0	0/0:20,0:20:60.19:0,60,1101	0/0:28,0:27:66.17:0,66,1150	0/0:17,0:17:48.16:0,48,899	0/0:28,0:29:29.33:0,29,1026	0/0:28,0:28:63.33:0,63,1161	0/0:24,0:22:63.17:0,63,1090	0/0:27,0:27:57.15:0,57,987	0/0:43,0:43:99:0,105,1793	1/1:16,8:23:19.85:146,20,0	0/1:12,5:16:40.63:80,0,41	1/1:22,1:22:0.93:2,1,0	0/0:20,0:20:54.15:0,54,922	0/0:31,0:31:89.84:0,90,1475	0/0:30,0:29:87.27:0,87,1571	0/0:30,0:29:87.28:0,87,1595
chr10	76225370	.	G	GAC	6914.09	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-12.340;DP=925;FS=2.921;HRun=0;HaplotypeScore=121.7427;InbreedingCoeff=0.9992;MQ=65.59;MQ0=4;MQRankSum=-1.335;QD=31.86;ReadPosRankSum=5.428;VQSLOD=7.0018;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:75.20:0,75,942	0/0:8,0:8:21.04:0,21,256	0/0:47,0:40:79.75:0,80,981	0/0:37,0:33:41.30:0,41,819	0/0:28,0:28:84.16:0,84,1052	0/0:36,0:36:81.22:0,81,1005	0/0:23,0:23:51.13:0,51,632	0/0:43,0:43:99:0,102,1264	1/1:7,26:32:66.23:1121,66,0	0/0:55,0:55:99:0,147,1775	0/0:21,0:21:57.13:0,57,682	1/1:4,28:33:60.21:1015,60,0	1/1:4,38:43:84.29:1428,84,0	0/0:22,0:22:63.19:0,63,803	0/0:34,0:34:84.22:0,84,1032	0/0:23,0:23:60.18:0,60,766	0/0:23,0:24:54.26:0,54,702	0/0:18,0:18:48.16:0,48,624	0/0:23,0:22:54.15:0,54,664	0/0:51,0:51:99:0,132,1668	0/0:56,0:56:99:0,136,1659	1/1:2,43:46:90.31:1530,90,0	1/1:2,25:28:57.20:969,57,0	1/1:4,29:33:51.17:851,51,0	0/0:18,0:18:51.15:0,51,648	0/0:50,0:50:99:0,141,1798	0/0:36,0:36:99:0,102,1325	0/0:22,0:22:60.10:0,60,729
chr10	76225798	.	TG	T	2488.25	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.223;DP=575;FS=4.651;HRun=1;HaplotypeScore=74.8015;InbreedingCoeff=0.9987;MQ=68.74;MQ0=6;MQRankSum=-0.685;QD=27.05;ReadPosRankSum=2.241;VQSLOD=3.5670;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:37:99:0,99,1569	0/0:14,0:14:39.13:0,39,621	0/0:11,0:11:29.93:0,30,373	0/0:22,0:18:42.71:0,43,590	0/0:23,0:22:63.20:0,63,983	0/0:28,0:27:78.26:0,78,1228	0/0:18,0:18:45.15:0,45,706	0/0:28,0:27:78.20:0,78,1167	1/1:1,10:11:30.10:416,30,0	0/0:35,0:35:96.33:0,96,1533	0/0:15,0:15:42.14:0,42,656	1/1:0,11:11:21.07:293,21,0	1/1:1,14:14:30.10:418,30,0	0/0:12,0:12:33.11:0,33,528	0/0:19,0:19:51.17:0,51,815	0/0:17,0:17:51.17:0,51,810	0/0:26,0:26:72.15:0,72,1142	0/0:24,0:24:69.23:0,69,1091	0/0:17,0:17:51.17:0,51,807	0/0:23,0:23:60.19:0,60,936	0/0:19,0:18:51.17:0,51,810	1/1:0,18:18:45.15:628,45,0	1/1:0,19:19:33.11:460,33,0	1/1:0,18:17:33.11:461,33,0	0/0:22,0:22:66.20:0,66,1017	0/0:24,0:24:72.25:0,72,1151	0/0:31,0:31:87.27:0,87,1363	0/0:16,0:16:48.16:0,48,767
chr10	76226563	.	CACTT	C	2530.37	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.329;DP=750;FS=6.443;HRun=0;HaplotypeScore=120.0019;InbreedingCoeff=0.9997;MQ=80.93;MQ0=0;MQRankSum=-3.583;QD=41.48;ReadPosRankSum=3.701;VQSLOD=3.8713;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,61:61:99:2625,135,0	0/0:11,0:11:33.11:0,33,903	0/0:26,0:27:64.55:0,65,1761	0/0:18,0:17:50.22:0,50,1001	0/0:26,0:26:78.01:0,78,1987	0/0:27,0:27:81.26:0,81,2159	0/0:30,0:30:84.27:0,84,2185	0/0:25,0:25:75.26:0,75,2033	0/0:30,0:30:90.26:0,90,2202	0/0:21,0:21:63.21:0,63,1650	0/0:26,0:26:78.19:0,78,2007	0/0:26,0:26:78.23:0,78,1974	0/0:31,0:31:93.31:0,93,2463	0/0:25,0:25:69.22:0,69,1867	0/0:37,0:37:99:0,108,2744	0/0:19,0:19:57.17:0,57,1386	0/0:25,0:25:75.24:0,75,1966	0/0:14,0:14:42.11:0,42,1001	0/0:18,0:18:54.19:0,54,1485	0/0:27,0:27:81.24:0,81,2079	0/0:58,0:58:99:0,172,4643	0/0:25,0:25:72.23:0,72,1883	0/0:29,0:29:87.26:0,87,2139	0/0:29,0:29:87.26:0,87,2255	0/0:20,0:20:60.21:0,60,1645	0/0:20,0:19:60.19:0,60,1503	0/0:23,0:23:66.19:0,66,1680	0/0:22,0:22:66.19:0,66,1782
chr10	76228148	.	G	GA	3584.93	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.491;DP=627;FS=25.636;HRun=6;HaplotypeScore=60.9900;InbreedingCoeff=0.9946;MQ=84.86;MQ0=0;MQRankSum=-2.222;QD=33.82;ReadPosRankSum=2.413;VQSLOD=1.7847;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:83:0,83,991	0/0:13,0:13:39.09:0,39,398	0/0:22,0:22:41.12:0,41,475	0/0:17,0:18:30.66:0,31,373	0/0:35,0:35:93.18:0,93,936	0/0:16,0:16:42.09:0,42,429	0/0:19,0:19:53.96:0,54,534	0/0:32,0:32:81.18:0,81,826	1/1:1,19:20:54.17:679,54,0	0/0:29,0:29:81.18:0,81,826	0/0:28,0:28:84.19:0,84,857	1/1:0,10:10:30.10:377,30,0	1/1:3,16:19:48.15:604,48,0	0/0:22,0:22:57.12:0,57,581	0/0:21,0:21:57.10:0,57,568	0/0:12,0:12:33.07:0,33,336	0/0:34,0:34:96.17:0,96,964	0/0:23,1:24:12.92:0,13,557	0/0:18,0:18:48.11:0,48,490	0/0:26,0:26:69.16:0,69,704	0/0:21,0:21:60.13:0,60,612	1/1:2,26:28:72.16:906,72,0	1/1:1,13:14:39.12:491,39,0	1/1:0,15:15:42.13:528,42,0	0/0:29,0:29:81.17:0,81,821	0/0:19,0:19:54.11:0,54,546	0/0:29,0:29:81.18:0,81,826	0/0:18,0:18:51.12:0,51,520
chr10	76229800	.	GTTTGT	G	1810.94	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.794;DP=543;FS=44.460;HRun=0;HaplotypeScore=105.5424;InbreedingCoeff=0.9669;MQ=67.93;MQ0=3;MQRankSum=-5.742;QD=25.15;ReadPosRankSum=2.608;VQSLOD=1.6437;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:45.15:0,45,1278	0/0:10,0:10:21.07:0,21,580	0/0:31,0:23:21.07:0,21,491	0/0:37,0:22:15.40:0,15,330	0/0:32,0:32:75.26:0,75,2038	0/0:13,0:13:24.06:0,24,624	0/0:26,0:26:57.18:0,57,1546	0/0:28,0:28:60.20:0,60,1519	1/1:4,3:7:12.04:216,12,0	0/0:21,0:21:51.11:0,51,1198	0/0:25,0:25:57.18:0,57,1532	1/1:5,12:17:27.09:506,27,0	1/1:5,4:9:12.04:220,12,0	0/0:15,0:15:36.12:0,36,992	0/0:18,0:18:45.15:0,45,1267	0/0:11,0:11:27.09:0,27,751	0/0:24,0:24:51.16:0,51,1344	0/0:14,0:14:27.09:0,27,690	0/0:23,0:21:42.14:0,42,1052	0/0:23,0:23:42.14:0,42,1158	0/0:12,0:12:21.07:0,21,559	1/1:5,12:17:30.06:525,30,0	1/1:1,9:10:21.07:393,21,0	1/1:3,9:12:8.99:132,9,0	0/0:20,0:20:39.11:0,39,974	0/0:16,0:16:30.10:0,30,781	0/0:30,0:30:63.22:0,63,1707	0/0:11,0:11:21.07:0,21,528
chr10	76229887	.	AGAG	A	977.57	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.910;DP=515;FS=1.675;HRun=0;HaplotypeScore=81.8083;InbreedingCoeff=0.9139;MQ=83.84;MQ0=0;MQRankSum=0.105;QD=33.71;ReadPosRankSum=2.845;VQSLOD=4.3225;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:63.22:1072,63,0	0/0:10,0:10:30.10:0,30,664	0/0:26,0:26:31.42:0,31,1386	0/0:18,0:18:39.05:0,39,889	0/0:22,0:22:57.18:0,57,1269	0/0:11,0:11:33.11:0,33,761	0/0:32,0:32:93.32:0,93,2098	0/0:24,0:24:72.25:0,72,1612	0/0:11,0:11:30.10:0,30,412	0/0:15,0:15:45.15:0,45,1032	0/0:19,0:19:51.16:0,51,1129	0/0:12,0:12:30.10:0,30,425	0/0:6,0:6:18.03:0,18,239	0/0:9,0:9:27.09:0,27,620	0/0:24,0:24:69.24:0,69,1562	0/0:17,0:17:48.16:0,48,1107	0/0:21,0:21:63.18:0,63,1329	0/0:17,0:16:51.17:0,51,1148	0/0:16,0:16:46.04:0,46,959	0/0:20,0:20:57.20:0,57,1267	0/0:22,0:22:57.20:0,57,1313	0/0:8,0:8:21.07:0,21,281	0/0:13,0:13:7.53:0,8,298	0/0:29,0:29:67.76:0,68,907	0/0:20,0:20:60.14:0,60,1300	0/0:24,0:24:66.22:0,66,1449	0/0:30,0:30:84.29:0,84,1865	0/0:10,0:10:30.10:0,30,683
chr10	76230093	.	G	GA	2307.85	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=2.592;DP=496;FS=10.807;HRun=7;HaplotypeScore=57.0246;InbreedingCoeff=0.9799;MQ=81.27;MQ0=0;MQRankSum=-2.115;QD=27.15;ReadPosRankSum=1.364;VQSLOD=3.8600;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:40.24:768,40,0	0/0:5,0:5:12.01:0,12,116	0/0:29,0:26:56.04:0,56,515	0/0:13,0:11:14.70:0,15,112	0/0:23,0:23:63.10:0,63,608	0/0:17,0:17:45.06:0,45,430	0/0:14,0:14:33.04:0,33,314	0/0:29,0:29:69.02:0,69,645	1/1:1,10:11:30.09:359,30,0	0/0:25,0:25:75.08:0,75,712	0/0:32,0:32:78.07:0,78,743	1/1:1,6:7:18.06:217,18,0	1/1:0,10:10:27.08:326,27,0	0/0:5,0:5:14.99:0,15,136	0/0:13,0:13:33.05:0,33,318	0/0:10,0:10:24.03:0,24,231	0/0:28,0:28:78.12:0,78,752	0/0:11,0:11:24.04:0,24,232	0/0:20,0:20:45.07:0,45,434	0/0:29,0:29:78.12:0,78,753	0/0:16,0:16:42.04:0,42,395	1/1:1,12:13:30.09:362,30,0	1/1:0,6:6:12.04:145,12,0	1/1:1,12:13:27.08:326,27,0	0/0:17,0:17:45.07:0,45,434	0/0:29,0:29:84.11:0,84,803	0/0:22,0:22:51.06:0,51,487	0/0:24,0:24:60.09:0,60,579
chr10	76230252	.	C	CG	13431.02	PASS	AB=0.933;AC=55;AF=0.982;AN=56;BaseQRankSum=-0.329;DP=477;FS=3.022;HRun=5;HaplotypeScore=215.2939;InbreedingCoeff=-0.0211;MQ=51.31;MQ0=0;MQRankSum=-2.359;QD=28.16;ReadPosRankSum=1.216;VQSLOD=2.1749;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,19:27:63.14:776,63,0	1/1:1,11:12:36.11:458,36,0	1/1:7,3:6:6.90:115,7,0	0/1:13,1:8:12.85:76,0,13	1/1:6,20:26:45.09:588,45,0	1/1:3,14:17:45.14:584,45,0	1/1:2,12:14:36.07:454,36,0	1/1:6,20:19:45.14:579,45,0	1/1:1,20:21:60.07:730,60,0	1/1:3,16:18:48.16:627,48,0	1/1:3,15:18:48.11:594,48,0	1/1:4,14:18:42.05:513,42,0	1/1:4,11:15:36.07:452,36,0	1/1:4,11:15:39.04:473,39,0	1/1:4,8:12:24.08:315,24,0	1/1:1,10:11:27.09:354,27,0	1/1:4,19:23:54.13:690,54,0	1/1:5,6:11:24.04:297,24,0	1/1:3,16:16:45.15:591,45,0	1/1:1,15:16:39.13:512,39,0	1/1:7,17:24:36.05:454,36,0	1/1:4,14:18:39.13:512,39,0	1/1:2,10:12:27.09:354,27,0	1/1:5,13:18:21.06:276,21,0	1/1:2,11:13:33.11:433,33,0	1/1:6,20:26:60.20:786,60,0	1/1:1,15:16:48.11:611,48,0	1/1:1,5:6:18.05:224,18,0
chr10	76230265	.	C	CT	16625.44	PASS	AB=0.833;AC=55;AF=0.982;AN=56;BaseQRankSum=-2.393;DP=485;FS=0.000;HRun=1;HaplotypeScore=224.8652;InbreedingCoeff=-0.0210;MQ=43.91;MQ0=0;MQRankSum=-2.431;QD=34.28;ReadPosRankSum=0.858;VQSLOD=4.1850;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:60.16:872,60,0	1/1:3,9:12:30.10:433,30,0	1/1:2,3:5:9.01:135,9,0	0/1:4,1:4:28.86:73,0,29	1/1:4,21:25:48.02:622,48,0	1/1:1,16:17:45.15:663,45,0	1/1:2,18:20:45.12:648,45,0	1/1:7,19:19:51.17:743,51,0	1/1:1,22:23:63.21:942,63,0	1/1:1,17:17:48.16:719,48,0	1/1:3,16:19:39.08:526,39,0	1/1:1,17:18:54.18:796,54,0	1/1:0,15:15:45.15:673,45,0	1/1:1,13:14:39.13:574,39,0	1/1:2,10:12:36.04:488,36,0	1/1:2,10:12:33.08:471,33,0	1/1:5,25:30:66.04:876,66,0	1/1:2,10:12:30.10:449,30,0	1/1:3,14:16:48.14:685,48,0	1/1:3,15:18:48.06:633,48,0	1/1:7,17:23:29.99:378,30,0	1/1:0,15:15:45.11:637,45,0	1/1:0,15:15:39.13:573,39,0	1/1:1,17:18:21.27:313,21,0	1/1:0,17:17:45.15:672,45,0	1/1:1,25:26:78.22:1140,78,0	1/1:5,14:19:48.09:669,48,0	1/1:2,4:6:15.05:224,15,0
chr10	76230276	.	A	AT	17832.85	PASS	AB=0.778;AC=53;AF=0.946;AN=56;BaseQRankSum=-0.908;DP=460;FS=2.168;HRun=0;HaplotypeScore=201.0846;InbreedingCoeff=0.4618;MQ=43.76;MQ0=1;MQRankSum=-2.976;QD=39.28;ReadPosRankSum=1.863;VQSLOD=4.2238;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:26:60.19:932,60,0	1/1:0,8:8:24.08:381,24,0	0/1:5,2:5:58.50:60,0,58	0/0:5,1:3:2.94:0,3,18	1/1:1,21:22:39.13:621,39,0	1/1:1,19:20:51.17:813,51,0	1/1:0,17:17:36.12:572,36,0	1/1:0,19:10:30.10:479,30,0	1/1:0,26:26:72.25:1145,72,0	1/1:0,16:15:45.15:718,45,0	1/1:1,15:16:39.13:617,39,0	1/1:1,18:19:57.18:885,57,0	1/1:1,15:17:48.16:752,48,0	1/1:1,16:17:48.15:740,48,0	1/1:1,14:15:45.14:692,45,0	1/1:0,13:13:39.13:622,39,0	1/1:1,25:26:54.14:856,54,0	1/1:1,12:13:36.12:573,36,0	1/1:0,13:12:36.12:575,36,0	1/1:0,16:16:48.16:762,48,0	1/1:1,18:18:24.08:380,24,0	1/1:0,11:11:30.10:478,30,0	1/1:0,14:14:39.13:618,39,0	1/1:0,15:15:24.29:382,24,0	1/1:0,19:19:57.19:906,57,0	1/1:2,26:28:81.27:1269,81,0	1/1:1,16:17:48.16:764,48,0	1/1:0,5:5:15.05:239,15,0
chr10	76230593	.	T	TGG	7775.08	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-7.853;DP=578;FS=8.583;HRun=3;HaplotypeScore=72.6125;InbreedingCoeff=0.9940;MQ=75.26;MQ0=0;MQRankSum=-1.362;QD=43.68;ReadPosRankSum=2.582;VQSLOD=3.7387;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,37:42:84.24:1505,84,0	0/0:8,0:8:21.07:0,21,294	0/0:18,0:18:45.06:0,45,601	0/0:12,0:12:14.63:0,15,314	0/0:19,0:19:54.16:0,54,737	0/0:17,0:17:51.17:0,51,713	0/0:26,0:26:78.21:0,78,1037	0/0:22,0:22:60.18:0,60,809	1/1:0,31:31:78.27:1430,78,0	0/0:16,0:16:39.09:0,39,525	0/0:16,0:16:39.12:0,39,528	1/1:1,33:35:90.31:1651,90,0	1/1:2,20:22:54.19:990,54,0	0/0:23,0:23:63.21:0,63,882	0/0:24,0:24:69.20:0,69,946	0/0:13,0:13:39.13:0,39,546	0/0:44,0:44:99:0,123,1722	0/0:22,0:22:60.18:0,60,820	0/0:20,0:20:48.16:0,48,671	0/0:13,0:13:27.09:0,27,378	0/0:33,0:33:90.28:0,90,1242	1/1:1,14:15:36.12:660,36,0	1/1:0,7:7:21.07:384,21,0	1/1:3,22:26:63.22:1155,63,0	0/0:9,0:10:23.85:0,24,290	0/0:22,0:22:66.22:0,66,923	0/0:15,0:14:45.15:0,45,624	0/0:7,0:7:21.07:0,21,294
chr10	76231481	.	GA	G	2101.82	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.996;DP=503;FS=0.438;HRun=9;HaplotypeScore=67.5900;InbreedingCoeff=0.9623;MQ=79.59;MQ0=0;MQRankSum=-5.623;QD=22.12;ReadPosRankSum=2.078;VQSLOD=4.5271;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:31:78.04:714,78,0	0/0:8,0:9:26.89:0,27,278	0/0:15,0:14:12.40:0,12,253	0/0:13,0:13:34.30:0,34,261	0/0:33,0:33:88.47:0,88,970	0/0:22,0:22:63.19:0,63,727	0/0:7,0:7:21.06:0,21,242	0/0:29,0:29:66.20:0,66,762	1/1:1,19:20:57.03:519,57,0	0/0:20,0:20:57.15:0,57,635	0/0:18,0:20:59.97:0,60,655	1/1:1,10:11:30.01:273,30,0	1/1:2,9:11:27.01:246,27,0	0/0:18,0:18:42.10:0,42,466	0/0:20,0:19:26.93:0,27,523	0/0:21,0:21:60.18:0,60,691	0/0:28,0:28:78.23:0,78,900	0/0:20,0:22:56.97:0,57,620	0/0:12,0:12:21.06:0,21,242	0/0:27,0:27:75.18:0,75,831	0/0:3,0:3:9.03:0,9,104	1/1:0,10:10:30.02:272,30,0	1/1:0,10:10:24.01:218,24,0	1/1:0,2:2:6:54,6,0	0/0:22,1:23:32.69:0,33,617	0/0:25,0:25:66.18:0,66,753	0/0:28,1:29:50.70:0,51,811	0/0:12,0:12:33.09:0,33,372
chr10	76231864	.	GA	G	1002.29	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.370;DP=674;FS=6.733;HRun=9;HaplotypeScore=82.9794;InbreedingCoeff=0.9990;MQ=79.44;MQ0=3;MQRankSum=-2.021;QD=23.31;ReadPosRankSum=2.397;VQSLOD=4.4750;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,42:43:99:1097,120,0	0/0:12,0:12:36.11:0,36,415	0/0:38,0:28:38.33:0,38,589	0/0:32,0:27:56.08:0,56,555	0/0:22,0:22:51.15:0,51,582	0/0:17,0:17:39.12:0,39,449	0/0:23,0:23:57.17:0,57,660	0/0:23,0:23:57.62:0,58,638	0/0:22,0:22:57.63:0,58,652	0/0:20,0:20:51.13:0,51,574	0/0:18,0:18:45.12:0,45,510	0/0:27,0:27:66.20:0,66,764	0/0:25,0:25:69.19:0,69,787	0/0:21,0:21:54.16:0,54,625	0/0:25,0:25:66.20:0,66,764	0/0:24,0:24:60.17:0,60,685	0/0:31,0:31:84.19:0,84,930	0/0:20,0:20:54.13:0,54,609	0/0:23,0:23:37.91:0,38,610	0/0:21,0:21:63.19:0,63,729	0/0:41,1:43:95.69:0,96,1292	0/0:11,0:11:30.06:0,30,329	0/0:15,0:15:39.07:0,39,414	0/0:37,0:37:99:0,105,1196	0/0:14,0:14:42.12:0,42,486	0/0:24,0:24:69.19:0,69,784	0/0:25,0:25:66.18:0,66,755	0/0:18,0:18:54.13:0,54,604
chr10	76231971	.	T	TG	1097.70	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.833;DP=592;FS=15.285;HRun=5;HaplotypeScore=63.8186;InbreedingCoeff=0.9888;MQ=81.29;MQ0=0;MQRankSum=-3.059;QD=33.26;ReadPosRankSum=1.616;VQSLOD=2.6338;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,27:33:93.27:1193,93,0	0/0:8,0:8:18.04:0,18,193	0/0:20,0:19:45.11:0,45,484	0/0:20,0:20:23.33:0,23,385	0/0:21,0:21:57.10:0,57,594	0/0:16,0:16:45.11:0,45,482	0/0:22,0:22:63.14:0,63,667	0/0:25,0:25:60.12:0,60,624	0/0:23,0:23:63.16:0,63,677	0/0:18,0:18:36.08:0,36,385	0/0:21,0:21:63.16:0,63,671	0/0:23,0:23:63.16:0,63,676	0/0:16,0:16:42.11:0,42,451	0/0:19,0:19:51.13:0,51,548	0/0:21,0:21:60.15:0,60,645	0/0:27,0:27:72.12:0,72,753	0/0:38,0:38:99:0,99,1063	0/0:23,0:23:66.13:0,66,693	0/0:11,0:11:33.08:0,33,354	0/0:18,0:18:48.08:0,48,498	0/0:36,0:36:99:0,102,1076	0/0:13,0:13:39.10:0,39,418	0/0:18,0:18:48.11:0,48,509	0/0:33,0:33:96.24:0,96,1031	0/0:13,0:13:36.09:0,36,387	0/0:21,0:21:51.13:0,51,548	0/0:23,0:23:66.17:0,66,709	0/0:12,0:12:33.08:0,33,354
chr10	76232368	.	AAAG	A	853.47	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=5.611;DP=490;FS=3.377;HRun=0;HaplotypeScore=86.1904;InbreedingCoeff=0.3695;MQ=74.55;MQ0=1;MQRankSum=-2.288;QD=12.37;ReadPosRankSum=-3.079;VQSLOD=2.8846;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:57.15:897,57,0	0/0:14,0:14:42.14:0,42,897	0/1:13,0:12:6.57:7,0,184	0/0:14,0:11:13.09:0,13,316	0/0:42,0:42:99:0,123,2480	0/0:11,0:11:33.11:0,33,704	0/0:14,0:14:39.11:0,39,793	0/0:38,0:38:99:0,108,2014	0/0:16,0:16:20.38:0,20,287	0/0:18,0:18:51.12:0,51,1011	0/0:32,0:32:96.32:0,96,1962	0/0:10,0:10:29.42:0,29,181	0/1:15,0:15:58.87:59,0,165	0/0:11,0:11:33.11:0,33,704	0/0:21,0:21:63.22:0,63,1334	0/0:7,0:7:18.06:0,18,384	0/0:22,0:22:66.20:0,66,1366	0/0:16,0:16:48.16:0,48,994	0/0:20,0:20:57.20:0,57,1159	0/0:18,0:18:54.19:0,54,1127	0/0:10,0:10:30.10:0,30,641	0/0:6,0:6:17.80:0,18,131	0/1:18,0:18:6.15:6,0,239	0/0:9,0:9:25.28:0,25,172	0/0:17,0:17:48.14:0,48,949	0/0:17,0:17:51.16:0,51,994	0/0:30,0:30:90.29:0,90,1856	0/0:8,0:8:18.95:0,19,386
chr10	76232370	.	AG	A	1259.58	PASS	AB=0.882;AC=15;AF=0.268;AN=56;BaseQRankSum=12.961;DP=495;FS=0.894;HRun=1;HaplotypeScore=65.1716;InbreedingCoeff=0.9323;MQ=74.56;MQ0=1;MQRankSum=1.295;QD=11.25;ReadPosRankSum=-1.584;VQSLOD=1.0868;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:55.59:324,56,0	0/0:14,0:14:42.14:0,42,572	0/1:13,2:14:2.01:2,0,165	0/0:13,0:10:12.85:0,13,184	0/0:41,0:41:99:0,123,1600	0/0:13,0:13:39.07:0,39,491	0/0:13,0:13:39.12:0,39,514	0/0:39,0:39:99:0,117,1412	1/1:16,0:16:31.46:192,31,0	0/0:18,0:18:54.10:0,54,672	0/0:32,0:32:96.27:0,96,1241	1/1:10,0:10:28.76:151,29,0	1/1:15,1:16:40.79:279,41,0	0/0:11,0:11:33.11:0,33,443	0/0:21,0:21:63.20:0,63,841	0/0:7,0:7:18.06:0,18,240	0/0:22,0:22:50.23:0,50,839	0/0:16,0:16:47.99:0,48,623	0/0:20,0:20:57.16:0,57,716	0/0:18,0:18:54.11:0,54,695	0/0:11,0:11:33.10:0,33,433	1/1:6,0:6:14.86:92,15,0	1/1:16,2:18:45.54:292,46,0	1/1:9,0:9:19.84:123,20,0	0/0:16,0:16:48.14:0,48,625	0/0:18,0:18:54.15:0,54,678	0/0:31,0:31:93.26:0,93,1213	0/0:9,0:9:21.04:0,21,267
chr10	76232580	.	TAAAGAGAGAGAGAGAGAG	T	424.42	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=3.037;DP=422;FS=1.239;HRun=0;HaplotypeScore=175.4467;InbreedingCoeff=0.6919;MQ=55.22;MQ0=9;MQRankSum=-0.126;QD=14.64;ReadPosRankSum=0.353;VQSLOD=2.7928;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,5:23:32.18:518,32,0	0/0:4,0:4:12.02:0,12,330	0/0:10,0:1:2.99:0,3,24	0/0:20,0:4:6.87:0,7,51	0/0:22,0:21:54.87:0,55,1455	0/0:14,0:13:30.93:0,31,1222	0/0:12,0:12:32.99:0,33,1524	0/0:22,0:22:66.13:0,66,1559	0/0:12,0:12:18.03:0,18,586	0/0:18,0:18:53.41:0,53,1584	0/0:18,0:18:41.91:0,42,1318	0/0:10,0:10:30.04:0,30,763	0/0:18,0:18:21.03:0,21,809	0/0:14,0:14:31.40:0,31,711	0/0:15,0:15:45.01:0,45,1467	0/0:8,0:8:15.05:0,15,1232	0/0:26,0:25:69.05:0,69,3200	0/0:17,0:17:44.98:0,45,1149	0/0:11,0:10:30.07:0,30,1662	0/0:24,0:24:63.99:0,64,3156	0/0:13,0:13:29.99:0,30,1128	0/0:14,0:14:31.33:0,31,836	0/0:11,0:11:10.81:0,11,69	0/1:5,0:5:0.01:0,0,0	0/0:10,0:10:30.10:0,30,1714	0/0:18,0:18:54.14:0,54,2886	0/0:23,0:22:66.07:0,66,2453	0/0:8,0:7:18.02:0,18,490
chr10	76232582	.	A	AAG	1750.62	PASS	AB=0.850;AC=41;AF=0.820;AN=50;BaseQRankSum=-1.074;DP=464;FS=2.966;HRun=0;HaplotypeScore=93.6973;InbreedingCoeff=-0.0771;MQ=53.65;MQ0=10;MQRankSum=-0.926;QD=4.30;ReadPosRankSum=-0.451;VQSLOD=2.6631;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:5.68:0,6,28	1/1:6,0:6:2.90:44,3,0	./.	./.	1/1:16,0:21:5.74:52,6,0	0/1:11,4:14:35.13:35,0,55	1/1:8,3:11:11.95:149,12,0	1/1:28,0:28:13.15:102,13,0	1/1:13,0:13:8.99:76,9,0	1/1:20,0:20:15.02:156,15,0	1/1:19,0:19:8.99:75,9,0	0/1:13,0:13:0:0,0,0	1/1:19,0:19:8.99:75,9,0	1/1:11,3:14:3.01:44,3,0	1/1:13,2:15:9.02:113,9,0	0/1:3,7:9:20.09:118,0,20	0/1:22,9:31:11.08:244,0,11	1/1:14,5:19:9.92:134,10,0	0/1:13,0:12:23.29:40,0,23	0/1:28,0:28:26.07:37,0,26	1/1:14,2:16:3.01:44,3,0	1/1:18,0:17:2.09:25,2,0	1/1:12,0:12:3:27,3,0	./.	1/1:10,0:10:3.01:44,3,0	1/1:15,5:20:6.49:87,6,0	0/1:19,5:25:30.73:118,0,31	1/1:8,0:7:3.01:39,3,0
chr10	76232586	.	G	GAGAGAGAGAA	1657.72	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=4.639;DP=469;FS=9.087;HRun=0;HaplotypeScore=153.3142;InbreedingCoeff=0.5636;MQ=52.78;MQ0=11;MQRankSum=-2.467;QD=13.70;ReadPosRankSum=-1.727;VQSLOD=1.9470;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:17.57:0,18,214	0/1:5,0:5:8.90:9,0,41	0/0:11,0:1:3:0,3,27	0/0:19,0:2:2.68:0,3,11	0/0:21,0:20:22.46:0,22,193	0/0:17,0:16:29.99:0,30,399	0/0:11,0:11:22.56:0,23,214	0/0:28,0:28:21.99:0,22,404	1/1:6,7:16:9.03:380,9,0	0/1:17,0:17:99:197,0,152	0/0:17,0:17:14.29:0,14,122	1/1:14,0:14:33.33:271,33,0	1/1:16,1:17:11.97:366,12,0	0/0:15,0:15:20.57:0,21,185	0/0:14,0:14:26.99:0,27,249	0/0:11,0:10:18.03:0,18,259	0/0:31,0:30:62.78:0,63,638	0/0:19,0:19:32.83:0,33,310	0/1:13,0:12:27.47:27,0,224	0/0:28,0:28:42.10:0,42,520	0/0:16,0:16:20.48:0,20,183	1/1:18,0:17:6.05:244,6,0	1/1:3,9:13:9.42:181,9,0	1/1:2,3:8:3.01:155,3,0	0/0:11,0:11:11.33:0,11,208	0/0:20,0:20:51.53:0,52,425	0/0:26,0:25:49.50:0,49,551	0/0:12,0:10:3.04:0,3,106
chr10	76232588	.	G	GAGAGAGAA	1424.91	PASS	AB=0.980;AC=13;AF=0.232;AN=56;BaseQRankSum=5.353;DP=474;FS=12.187;HRun=0;HaplotypeScore=135.0460;InbreedingCoeff=0.3986;MQ=52.69;MQ0=11;MQRankSum=-3.299;QD=11.49;ReadPosRankSum=-1.440;VQSLOD=1.5638;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:17.69:0,18,199	0/1:5,0:5:9.18:9,0,41	0/0:11,0:1:3:0,3,27	0/0:20,0:2:2.68:0,3,11	0/0:21,0:20:2.58:0,3,169	0/0:17,0:16:32.93:0,33,384	0/0:11,0:11:25.75:0,26,196	0/0:28,0:28:24.18:0,24,406	1/1:14,1:15:9.03:340,9,0	0/1:17,0:17:99:158,0,173	0/0:17,0:17:14.46:0,14,122	0/1:14,0:14:3.71:223,0,4	1/1:5,13:20:11.97:386,12,0	0/0:15,0:15:19.95:0,20,172	0/0:14,0:14:26.97:0,27,223	0/0:11,0:10:18:0,18,208	0/0:31,0:30:62.70:0,63,548	0/0:21,0:21:35.82:0,36,282	0/1:14,0:13:7.23:7,0,239	0/0:28,0:28:42.06:0,42,508	0/0:17,0:17:23.78:0,24,194	1/1:18,0:17:5.54:219,6,0	1/1:12,0:12:9.42:137,9,0	0/1:8,1:9:13.96:104,0,14	0/0:11,0:11:14.28:0,14,227	0/0:20,0:20:52.63:0,53,416	0/0:25,0:24:53.77:0,54,520	0/0:12,0:10:3.15:0,3,107
chr10	76232809	.	C	CA	4304.91	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-0.307;DP=630;FS=2.755;HRun=6;HaplotypeScore=68.6456;InbreedingCoeff=0.9971;MQ=83.04;MQ0=0;MQRankSum=-0.392;QD=32.61;ReadPosRankSum=1.617;VQSLOD=5.3163;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,1:54:99:0,110,1431	0/0:10,0:10:30.06:0,30,301	0/0:21,0:20:32.99:0,33,311	0/0:17,0:18:27.36:0,27,242	0/0:22,0:22:57.12:0,57,576	0/0:31,0:31:87.17:0,87,874	0/0:25,0:25:63.09:0,63,637	0/0:33,0:33:96.18:0,96,960	1/1:1,25:26:69.22:868,69,0	0/0:17,0:17:48.08:0,48,473	0/0:21,0:21:54.06:0,54,532	1/1:0,19:19:54.17:679,54,0	1/1:3,18:21:51.16:641,51,0	0/0:19,1:20:16.36:0,16,475	0/0:21,0:21:54.08:0,54,532	0/0:20,0:20:57.10:0,57,568	0/0:18,0:18:45.07:0,45,449	0/0:18,0:18:48.11:0,48,490	0/0:17,0:17:39.07:0,39,393	0/0:23,0:23:66.12:0,66,660	0/0:37,0:37:99:0,108,1088	1/1:2,18:20:54.17:679,54,0	1/1:2,22:24:61.44:758,61,0	1/1:4,18:22:54.17:679,54,0	0/0:16,0:16:48.07:0,48,475	0/0:22,0:22:63.14:0,63,638	0/0:24,0:24:66.13:0,66,665	0/0:10,0:10:30.05:0,30,299
chr10	76235211	.	G	GTT	594.73	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=2.221;DP=427;FS=3.310;HRun=9;HaplotypeScore=54.2828;InbreedingCoeff=0.6557;MQ=72.15;MQ0=0;MQRankSum=-1.605;QD=17.49;ReadPosRankSum=-1.428;VQSLOD=1.2567;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,16:24:47:688,47,0	0/0:5,0:5:15.04:0,15,160	0/0:7,0:7:17.92:0,18,162	0/1:10,0:10:8.99:9,0,101	0/0:16,0:16:36.09:0,36,383	0/0:20,0:20:48.06:0,48,495	0/0:16,0:16:45.09:0,45,468	0/0:18,0:18:48.10:0,48,511	0/0:23,0:23:63.15:0,63,671	0/0:14,0:14:36.09:0,36,383	0/0:18,0:18:48.10:0,48,510	0/0:16,0:16:36.06:0,36,375	0/0:11,0:11:27.05:0,27,280	0/0:11,0:11:30.06:0,30,318	0/0:19,0:19:51.10:0,51,533	0/0:15,0:15:39.09:0,39,414	0/0:23,0:23:60.10:0,60,628	0/0:10,0:10:24.06:0,24,255	0/0:17,0:17:33.05:0,33,348	0/0:13,0:13:36.07:0,36,375	0/0:13,0:13:36.08:0,36,383	0/0:9,0:9:24.06:0,24,255	0/0:9,0:9:26.98:0,27,272	0/0:16,0:17:25.07:0,25,406	0/0:16,0:16:45.02:0,45,456	0/0:30,0:30:78.08:0,78,814	0/0:20,0:20:60.15:0,60,638	0/0:7,0:7:18.04:0,18,192
chr10	76235271	.	TTTGA	T	1996.47	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.572;DP=584;FS=3.315;HRun=0;HaplotypeScore=100.8810;InbreedingCoeff=0.9994;MQ=81.22;MQ0=0;MQRankSum=-3.156;QD=58.72;ReadPosRankSum=1.219;VQSLOD=5.5218;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:34:99:2091,102,0	0/0:11,0:11:33.11:0,33,924	0/0:24,0:24:70.12:0,70,1836	0/0:16,0:16:42.08:0,42,1065	0/0:20,0:20:60.21:0,60,1646	0/0:27,0:27:81.28:0,81,2315	0/0:23,0:23:69.24:0,69,1999	0/0:27,0:27:81.28:0,81,2343	0/0:27,0:27:81.28:0,81,2302	0/0:20,0:20:60.20:0,60,1600	0/0:17,0:17:48.16:0,48,1267	0/0:20,0:20:60.21:0,60,1727	0/0:16,0:16:48.16:0,48,1389	0/0:17,0:17:51.18:0,51,1478	0/0:20,0:20:60.21:0,60,1731	0/0:18,0:18:51.18:0,51,1392	0/0:21,0:21:63.22:0,63,1825	0/0:15,0:15:45.15:0,45,1247	0/0:11,0:11:33.11:0,33,912	0/0:23,0:23:69.18:0,69,1857	0/0:21,0:21:63.22:0,63,1788	0/0:19,0:19:57.16:0,57,1533	0/0:27,0:27:81.15:0,81,1861	0/0:24,0:24:72.25:0,72,2048	0/0:13,0:13:39.13:0,39,1079	0/0:36,0:36:99:0,108,3057	0/0:20,0:20:60.19:0,60,1599	0/0:17,0:17:51.18:0,51,1478
chr10	76235459	.	GGT	G	916.41	PASS	AB=0.921;AC=4;AF=0.071;AN=56;BaseQRankSum=5.187;DP=724;FS=0.000;HRun=0;HaplotypeScore=152.9730;InbreedingCoeff=0.4125;MQ=62.78;MQ0=2;MQRankSum=-3.229;QD=11.90;ReadPosRankSum=-0.201;VQSLOD=3.4092;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,37:43:81.20:994,81,0	0/0:11,0:11:25.63:0,26,366	0/0:28,1:24:4.25:0,4,535	0/0:30,0:25:42.01:0,42,587	0/0:33,0:33:65.86:0,66,1054	0/0:19,0:18:45.14:0,45,721	0/0:24,1:25:19.30:0,19,803	0/0:37,1:38:58.36:0,58,1388	0/0:31,0:31:78.27:0,78,1288	0/0:37,0:37:78.97:0,79,1284	0/1:17,2:19:24.50:24,0,691	0/0:42,0:41:92.51:0,93,1457	0/0:24,0:24:66.13:0,66,1006	0/1:14,1:15:10.70:11,0,367	0/0:18,0:18:48.16:0,48,790	0/0:20,0:20:51.17:0,51,838	0/0:31,1:32:34.40:0,34,1077	0/0:20,0:20:57.15:0,57,915	0/0:24,1:25:13.31:0,13,716	0/0:30,0:30:40.53:0,41,640	0/0:30,0:30:77.97:0,78,1219	0/0:19,0:19:31.87:0,32,542	0/0:17,0:17:28.11:0,28,487	0/0:28,0:28:57.18:0,57,914	0/0:24,0:24:56.68:0,57,903	0/0:27,0:27:63.44:0,63,975	0/0:34,0:34:68.55:0,69,1062	0/0:4,0:4:9.03:0,9,149
chr10	76235478	.	C	CA	73.78	PASS	AB=0.870;AC=3;AF=0.054;AN=56;BaseQRankSum=6.439;DP=932;FS=15.413;HRun=0;HaplotypeScore=299.0912;InbreedingCoeff=-0.0557;MQ=48.27;MQ0=3;MQRankSum=-7.072;QD=0.54;ReadPosRankSum=-3.054;VQSLOD=0.6062;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:81.47:0,81,1090	0/1:15,9:24:11.91:12,0,317	0/0:30,0:22:66.20:0,66,885	0/0:29,0:23:59.56:0,60,759	0/0:47,1:49:49.83:0,50,670	0/0:25,0:27:63.73:0,64,811	0/0:23,0:23:59.29:0,59,779	0/0:44,0:44:99:0,129,1731	0/0:33,0:33:83.61:0,84,1060	0/1:56,4:60:99:120,0,1341	0/0:36,5:41:52.87:0,53,693	0/0:37,0:37:98.35:0,98,1311	0/0:22,0:22:62.42:0,62,844	0/0:15,0:16:37.31:0,37,391	0/0:19,0:19:47.89:0,48,640	0/0:18,0:19:47.38:0,47,609	0/0:23,0:23:65.69:0,66,858	0/0:22,1:24:22.08:0,22,854	0/0:24,0:24:66.06:0,66,856	0/0:49,12:61:39.09:0,39,632	0/0:29,0:29:72.23:0,72,998	0/0:43,5:48:44.40:0,44,427	0/0:42,7:49:35.34:0,35,369	0/0:23,0:23:57.17:0,57,758	0/0:38,6:44:57.97:0,58,802	0/1:50,3:53:39.76:40,0,1233	0/0:32,0:33:77.39:0,77,981	0/0:8,0:8:20.62:0,21,191
chr10	76235514	.	GGA	G	1290.52	PASS	AB=0.918;AC=21;AF=0.375;AN=56;BaseQRankSum=2.264;DP=739;FS=3.149;HRun=0;HaplotypeScore=283.8152;InbreedingCoeff=-0.4913;MQ=38.78;MQ0=0;MQRankSum=-4.757;QD=2.63;ReadPosRankSum=-4.891;VQSLOD=1.7593;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:35.87:0,36,348	0/1:15,1:16:52.70:53,0,71	0/1:11,0:10:11.99:12,0,139	0/1:13,0:11:29.47:29,0,126	0/0:44,2:46:10.93:0,11,53	0/0:21,0:21:6.84:0,7,272	0/1:19,1:20:32:32,0,178	0/1:26,11:37:99:508,0,425	0/0:26,1:27:9.05:0,9,280	0/0:52,1:53:5.11:0,5,542	0/0:42,1:43:6.86:0,7,329	0/1:30,4:34:47.92:48,0,341	0/1:20,1:21:2.14:2,0,231	0/1:8,1:10:50.38:50,0,82	0/1:14,4:18:95.21:95,0,237	0/0:13,2:15:4.64:0,5,230	0/1:14,0:14:38.35:38,0,106	0/1:19,1:20:82.85:83,0,280	0/1:18,8:26:99:274,0,272	0/1:39,4:43:29.70:30,0,109	0/1:20,2:22:10.09:10,0,215	0/1:41,1:42:17.96:18,0,28	0/1:38,4:42:5.53:40,0,6	0/0:17,0:17:11.85:0,12,116	0/1:24,6:30:32.19:32,0,156	0/1:31,1:32:33.35:33,0,489	0/1:29,1:30:47.55:48,0,322	1/1:9,0:9:2.15:8,2,0
chr10	76235516	.	A	AGT	327.32	PASS	AB=0.944;AC=9;AF=0.161;AN=56;BaseQRankSum=6.806;DP=740;FS=24.495;HRun=0;HaplotypeScore=326.0104;InbreedingCoeff=-0.0022;MQ=38.27;MQ0=0;MQRankSum=-7.329;QD=1.07;ReadPosRankSum=0.029;VQSLOD=1.1931;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:30.06:0,30,227	0/1:16,0:16:10.02:10,0,39	0/0:10,0:9:20.65:0,21,108	0/0:12,0:10:17.60:0,18,116	0/1:36,6:43:15.38:17,0,15	0/0:21,0:21:26.80:0,27,229	0/0:20,0:20:24.40:0,24,182	0/0:36,0:36:86.17:0,86,549	0/0:25,0:25:15.10:0,15,187	0/1:46,5:54:99:240,0,458	0/0:39,4:43:28.23:0,28,268	0/0:34,1:34:36.38:0,36,268	0/0:20,1:21:16.62:0,17,183	0/0:10,0:10:11.96:0,12,100	0/0:17,0:17:28.78:0,29,239	0/0:15,0:15:20.50:0,20,173	0/0:15,0:15:9.85:0,10,93	0/0:19,0:19:34.51:0,35,267	0/0:27,0:27:56.11:0,56,369	0/1:39,3:43:59.93:100,0,60	0/0:24,0:24:32.90:0,33,264	0/1:37,3:41:10.89:11,0,12	1/1:37,6:43:3.63:22,4,0	0/0:16,0:16:11.88:0,12,82	0/1:28,0:29:8.11:8,0,106	0/1:31,2:36:51.98:52,0,414	0/0:29,1:30:2.83:0,3,268	0/0:9,1:10:4.70:0,5,28
chr10	76235519	.	GTAA	G	905.63	PASS	AB=0.959;AC=13;AF=0.232;AN=56;BaseQRankSum=8.830;DP=730;FS=2.007;HRun=0;HaplotypeScore=293.7979;InbreedingCoeff=-0.1168;MQ=36.77;MQ0=0;MQRankSum=-5.885;QD=2.44;ReadPosRankSum=3.041;VQSLOD=2.2395;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:36.70:0,37,503	0/1:15,0:15:5.12:5,0,123	0/0:10,0:9:17.90:0,18,236	0/0:10,0:9:20.55:0,21,228	0/0:43,0:43:5.37:0,5,60	0/0:19,0:19:26.46:0,26,436	0/0:18,0:18:22.38:0,22,308	0/0:35,0:35:61.02:0,61,763	0/0:24,1:25:21.62:0,22,323	0/1:54,1:55:99:558,0,687	0/0:41,2:43:30.97:0,31,499	0/0:35,0:34:34.64:0,35,544	0/1:19,0:19:7.96:8,0,351	0/0:8,2:10:11.75:0,12,161	0/0:17,0:17:26.54:0,27,370	0/0:14,0:14:19.40:0,19,265	0/0:14,0:14:14.92:0,15,210	0/1:19,0:19:36.70:37,0,376	0/1:29,0:29:76.24:76,0,390	0/1:32,12:44:18.50:18,0,177	0/0:22,0:22:30.35:0,30,385	0/1:40,1:41:24.32:24,0,39	0/1:44,1:45:23.09:23,0,69	0/0:16,0:16:11.87:0,12,165	0/1:29,0:29:22.42:22,0,212	0/1:36,0:36:99:184,0,798	0/1:23,6:29:22.73:23,0,436	1/1:10,0:10:10.30:81,10,0
chr10	76235520	.	TA	T	677.69	PASS	AB=0.843;AC=10;AF=0.179;AN=56;BaseQRankSum=8.516;DP=717;FS=2.094;HRun=2;HaplotypeScore=278.9335;InbreedingCoeff=-0.0343;MQ=36.69;MQ0=0;MQRankSum=-4.538;QD=2.31;ReadPosRankSum=3.394;VQSLOD=-0.4226;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,2:27:32.95:0,33,307	0/0:10,4:15:4.53:0,5,80	0/0:10,0:9:17.78:0,18,140	0/0:10,0:9:20.21:0,20,135	0/0:29,8:43:1.21:0,1,30	0/0:16,3:19:26.53:0,27,266	0/0:17,1:18:23.35:0,23,189	0/0:33,0:33:74.12:0,74,536	0/0:19,5:25:21.12:0,21,215	0/1:40,12:55:99:486,0,409	0/0:30,9:42:9.57:0,10,278	0/0:25,7:32:32.27:0,32,343	0/1:13,5:19:3.54:4,0,199	0/0:9,1:10:11.88:0,12,104	0/0:16,1:17:31.39:0,31,255	0/0:8,4:13:20.46:0,20,180	0/0:13,0:13:14.73:0,15,139	0/1:18,1:19:15.76:16,0,230	0/1:25,3:28:55.74:56,0,340	0/1:40,1:43:8.51:9,0,106	0/0:22,0:22:32.69:0,33,250	0/1:19,18:39:19.44:22,0,19	0/1:30,12:45:20.99:21,0,59	0/0:15,1:16:11.81:0,12,97	0/0:24,3:28:1.19:0,1,125	0/1:28,6:36:99:123,0,506	0/0:26,1:28:5.73:0,6,267	1/1:6,3:10:11.94:83,12,0
chr10	76235522	.	A	AG	194.58	PASS	AB=0.956;AC=8;AF=0.143;AN=56;BaseQRankSum=5.926;DP=703;FS=7.547;HRun=0;HaplotypeScore=287.1020;InbreedingCoeff=0.0702;MQ=36.27;MQ0=0;MQRankSum=-6.419;QD=0.92;ReadPosRankSum=1.743;VQSLOD=0.9764;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:34.90:0,35,218	0/0:11,1:15:3:0,3,56	0/0:8,0:7:16.06:0,16,89	0/0:7,0:8:18.76:0,19,127	0/1:38,5:43:1.78:2,0,12	0/0:18,0:18:25.75:0,26,186	0/0:16,0:16:22.81:0,23,129	0/0:35,0:35:72.98:0,73,404	0/1:23,1:24:8.22:8,0,137	0/1:47,2:53:99:232,0,341	0/0:37,3:41:22.39:0,22,204	0/0:31,2:32:40.97:0,41,281	0/0:17,1:19:26.08:0,26,166	0/0:9,0:9:11.79:0,12,81	0/0:17,0:17:32.76:0,33,193	0/0:11,1:12:13.25:0,13,112	0/0:14,0:14:11.03:0,11,96	0/1:18,0:18:3.90:4,0,158	0/1:28,0:28:12.75:13,0,195	0/0:35,2:42:16.92:0,17,99	0/0:23,0:23:31.79:0,32,168	0/0:34,2:38:8.72:0,9,34	0/0:35,3:42:7.12:0,7,48	0/0:15,0:15:11.53:0,12,61	0/0:23,1:28:17.76:0,18,117	0/1:34,1:36:25.54:26,0,364	0/0:25,1:27:17.42:0,17,194	1/1:5,1:10:5.05:31,5,0
chr10	76236472	.	T	TAC	1181.60	PASS	AB=0.859;AC=13;AF=0.241;AN=54;BaseQRankSum=2.520;DP=705;FS=4.584;HRun=0;HaplotypeScore=117.9504;InbreedingCoeff=0.1982;MQ=59.83;MQ0=9;MQRankSum=0.292;QD=3.70;ReadPosRankSum=-0.755;VQSLOD=2.5475;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,23:66:5.53:311,0,6	0/0:9,0:11:14.61:0,15,116	./.	0/1:37,0:19:0:0,0,0	0/1:15,1:15:35.74:36,0,56	0/0:17,0:17:11.51:0,12,100	0/0:23,0:22:24:0,24,249	0/0:26,0:26:8.83:0,9,77	0/1:20,6:28:74.44:74,0,75	0/0:29,0:30:14.35:0,14,115	0/0:14,0:14:2.99:0,3,23	0/1:15,6:25:53.97:114,0,54	1/1:15,2:17:18.06:252,18,0	1/1:11,6:18:9.03:134,9,0	0/0:18,0:18:23.96:0,24,261	0/0:16,0:17:14.84:0,15,127	0/0:16,0:20:29.71:0,30,271	0/0:26,0:28:9.36:0,9,278	0/0:19,0:19:9.12:0,9,79	0/0:23,0:23:20.42:0,20,180	0/0:61,0:63:57.25:0,57,528	0/1:22,6:27:8.47:164,0,8	0/1:11,0:11:0:0,0,0	0/1:33,14:48:8.94:226,0,9	0/0:22,0:22:23.85:0,24,223	0/0:18,0:21:23.55:0,24,199	0/1:23,2:24:17.72:18,0,212	0/0:4,0:4:3.01:0,3,33
chr10	76236766	.	TA	T	745.10	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.112;DP=602;FS=0.704;HRun=8;HaplotypeScore=63.9800;InbreedingCoeff=0.8605;MQ=57.07;MQ0=22;MQRankSum=1.733;QD=21.29;ReadPosRankSum=2.217;VQSLOD=4.0961;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:35:87.14:840,87,0	0/0:6,0:6:18.06:0,18,217	0/0:16,0:6:11.62:0,12,115	0/0:14,0:5:5.97:0,6,47	0/0:28,0:27:75.19:0,75,881	0/0:23,0:23:60.18:0,60,725	0/0:19,0:19:51.10:0,51,594	0/0:28,0:28:81.21:0,81,960	0/0:17,0:17:45.13:0,45,533	0/0:23,0:23:51.10:0,51,599	0/0:33,0:33:69.11:0,69,795	0/0:18,0:18:54.16:0,54,642	0/0:15,1:16:16.09:0,16,439	0/0:13,0:13:36.11:0,36,435	0/0:27,0:27:72.21:0,72,858	0/0:11,0:11:33.10:0,33,399	0/0:40,0:38:99:0,105,1244	0/0:14,0:14:39.08:0,39,454	0/0:25,0:25:66.20:0,66,796	0/0:24,0:24:69.21:0,69,831	0/0:11,0:11:27.07:0,27,315	0/0:27,0:27:60.16:0,60,701	0/0:28,0:28:66.20:0,66,797	0/0:15,0:15:42.13:0,42,507	0/0:17,0:17:48.15:0,48,580	0/0:20,0:20:57.16:0,57,670	0/0:38,0:39:92.81:0,93,1114	0/0:14,0:14:42.13:0,42,507
chr10	76237277	.	GA	G	2192.85	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.948;DP=558;FS=3.939;HRun=11;HaplotypeScore=66.8647;InbreedingCoeff=0.9309;MQ=66.67;MQ0=5;MQRankSum=0.563;QD=13.05;ReadPosRankSum=4.807;VQSLOD=3.8541;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:47:73.33:212,73,0	0/0:2,0:2:6.02:0,6,64	0/0:15,0:11:21.84:0,22,176	0/0:14,0:12:18.14:0,18,158	0/0:29,1:30:50.57:0,51,735	0/0:20,1:21:33.39:0,33,553	0/0:21,0:22:62.78:0,63,624	0/0:26,0:26:48.55:0,49,494	1/1:0,10:10:29.97:246,30,0	0/0:21,1:22:32.50:0,32,551	0/0:10,0:10:0.06:0,0,200	1/1:2,13:15:35.95:295,36,0	1/1:3,15:19:43.98:351,44,0	0/0:13,0:14:23.93:0,24,239	0/0:15,1:16:17.30:0,17,374	0/0:14,0:14:39.08:0,39,408	0/0:31,0:33:55.46:0,55,808	0/0:18,0:18:48.10:0,48,501	0/0:20,0:20:47.74:0,48,447	0/0:24,0:24:51.13:0,51,544	0/0:20,1:21:26.48:0,26,487	1/1:3,25:28:33.90:485,34,0	1/1:5,16:22:40.97:326,41,0	1/1:5,20:26:58.95:474,59,0	0/0:16,0:15:33.08:0,33,351	0/0:20,0:20:47.79:0,48,476	0/0:16,0:16:33.08:0,33,351	0/0:12,0:12:24.06:0,24,255
chr10	76237359	.	A	AGGAT	3021.15	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-7.035;DP=612;FS=2.733;HRun=0;HaplotypeScore=101.9468;InbreedingCoeff=0.8628;MQ=70.11;MQ0=6;MQRankSum=0.718;QD=29.05;ReadPosRankSum=0.206;VQSLOD=3.5223;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:27:9.01:0,9,82	0/0:5,0:5:9.03:0,9,139	0/0:33,0:22:2.98:0,3,21	0/0:37,0:33:2.99:0,3,23	0/0:24,0:24:42.13:0,42,625	0/0:28,0:28:39.10:0,39,558	0/0:19,0:19:18.06:0,18,266	0/0:21,0:21:3.01:0,3,46	1/1:12,4:16:24.04:468,24,0	0/0:28,0:28:33.10:0,33,491	0/0:13,0:13:12.04:0,12,184	1/1:7,4:11:18.06:383,18,0	1/1:11,6:17:30.09:608,30,0	0/0:17,0:17:21.07:0,21,317	0/0:14,0:14:21.07:0,21,322	0/0:24,0:24:39.11:0,39,563	0/0:30,0:30:36.09:0,36,511	0/0:19,0:19:15.05:0,15,228	0/0:21,0:21:24.08:0,24,371	0/0:21,0:22:33.08:0,33,448	0/0:51,0:51:93.30:0,93,1409	1/1:19,5:24:30.09:618,30,0	1/1:11,5:16:21.07:453,21,0	1/1:15,5:20:33.07:674,33,0	0/0:23,0:24:39.10:0,39,544	0/0:21,0:22:27.08:0,27,399	0/0:17,0:17:36.09:0,36,513	0/0:11,0:11:18.04:0,18,237
chr10	76238383	.	GA	G	1037.44	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.875;DP=620;FS=2.150;HRun=7;HaplotypeScore=60.3073;InbreedingCoeff=0.9960;MQ=77.25;MQ0=0;MQRankSum=-1.036;QD=24.70;ReadPosRankSum=-1.274;VQSLOD=3.6718;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,40:42:99:1132,111,0	0/0:8,0:8:24.07:0,24,286	0/0:15,0:15:39.12:0,39,486	0/0:11,0:11:27.06:0,27,319	0/0:27,0:27:66.21:0,66,830	0/0:27,0:27:81.26:0,81,1019	0/0:28,0:28:81.26:0,81,1019	0/0:30,0:30:72.18:0,72,877	0/0:31,0:31:87.26:0,87,1069	0/0:29,0:29:84.27:0,84,1057	0/0:17,0:17:39.12:0,39,490	0/0:15,0:15:45.14:0,45,566	0/0:11,0:11:33.11:0,33,415	0/0:12,0:12:36.10:0,36,430	0/0:22,0:22:60.19:0,60,755	0/0:16,0:16:48.14:0,48,591	0/0:47,0:47:99:0,132,1660	0/0:14,0:14:39.12:0,39,479	0/0:22,0:22:66.21:0,66,827	0/0:24,0:24:63.19:0,63,781	0/0:19,0:18:54.17:0,54,679	0/0:34,0:34:93.30:0,93,1170	0/0:19,0:19:54.16:0,54,663	0/0:30,0:30:87.27:0,87,1082	0/0:13,0:13:39.12:0,39,491	0/0:29,0:29:84.26:0,84,1045	0/0:17,0:17:45.14:0,45,563	0/0:11,0:11:33.11:0,33,415
chr10	76238743	.	A	AAGCC	8485.61	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.797;DP=730;FS=0.780;HRun=0;HaplotypeScore=130.9635;InbreedingCoeff=0.9967;MQ=70.73;MQ0=0;MQRankSum=-3.970;QD=57.34;ReadPosRankSum=2.015;VQSLOD=6.5408;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,129,2257	0/0:5,0:5:15.03:0,15,238	0/0:22,0:22:60.16:0,60,977	0/0:26,0:25:69.20:0,69,1135	0/0:30,0:30:75.26:0,75,1314	0/0:30,0:30:75.23:0,75,1277	0/0:23,0:23:63.17:0,63,1075	0/0:37,0:37:96.32:0,96,1654	1/1:6,23:30:69.24:1731,69,0	0/0:24,0:24:60.21:0,60,1068	0/0:17,0:17:45.13:0,45,741	1/1:2,21:24:60.21:1502,60,0	1/1:4,16:20:45.15:1156,45,0	0/0:18,0:18:51.16:0,51,879	0/0:34,0:34:99:0,102,1795	0/0:33,0:33:93.32:0,93,1649	0/0:33,0:33:93.28:0,93,1591	0/0:28,0:28:72.14:0,72,1187	0/0:19,0:19:54.17:0,54,911	0/0:19,0:19:48.16:0,48,855	0/0:44,0:43:99:0,120,2111	1/1:7,25:34:74.90:1905,75,0	1/1:4,13:18:36.12:884,36,0	1/1:1,20:22:51.18:1308,51,0	0/0:16,0:16:45.15:0,45,801	0/0:31,0:31:84.29:0,84,1479	0/0:29,0:29:81.27:0,81,1415	0/0:17,0:17:51.17:0,51,896
chr10	76239728	.	G	GAAA	1196.44	PASS	AB=0.819;AC=14;AF=0.259;AN=54;BaseQRankSum=8.712;DP=399;FS=12.792;HRun=12;HaplotypeScore=70.7478;InbreedingCoeff=0.8119;MQ=49.60;MQ0=10;MQRankSum=-5.547;QD=13.15;ReadPosRankSum=-3.313;VQSLOD=-0.4194;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:23:5.89:93,0,6	0/0:11,0:12:25.48:0,25,300	./.	0/1:10,0:1:0:0,0,0	0/0:16,0:18:23.29:0,23,347	0/0:14,0:15:25.42:0,25,300	0/0:19,0:19:31.36:0,31,357	0/0:18,0:20:26.02:0,26,258	1/1:4,3:7:12.04:214,12,0	0/0:12,0:14:11.82:0,12,162	0/0:8,0:9:20.94:0,21,220	1/1:4,4:8:12.04:199,12,0	1/1:1,3:4:6.02:110,6,0	0/0:11,0:12:20.79:0,21,218	0/0:11,0:12:25.50:0,26,300	0/0:3,0:3:6.01:0,6,67	0/0:35,0:38:83.81:0,84,898	0/0:25,0:26:53.73:0,54,560	0/0:11,0:12:23.94:0,24,251	0/0:12,0:12:16.97:0,17,173	0/0:12,0:12:23.97:0,24,260	1/1:6,8:14:18.06:295,18,0	1/1:6,3:12:14.36:239,14,0	1/1:4,8:9:12.04:220,12,0	0/0:12,0:13:23.88:0,24,242	0/0:18,0:19:32.82:0,33,354	0/0:13,0:13:23.84:0,24,258	0/0:12,0:15:10.86:0,11,253
chr10	76239745	.	C	CA	429.27	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.725;DP=411;FS=1.061;HRun=5;HaplotypeScore=53.1416;InbreedingCoeff=0.6389;MQ=54.08;MQ0=15;MQRankSum=-1.594;QD=16.51;ReadPosRankSum=-1.261;VQSLOD=2.7852;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,20:26:42.87:524,43,0	0/0:10,0:10:24.06:0,24,258	0/0:19,0:2:2.99:0,3,32	0/0:17,0:6:8.87:0,9,87	0/0:17,0:17:44.96:0,45,477	0/0:13,0:13:33.08:0,33,352	0/0:19,0:19:54.13:0,54,577	0/0:18,0:17:35.89:0,36,367	0/0:6,0:6:11.57:0,12,65	0/0:14,0:14:28.42:0,28,316	0/0:10,0:10:30.07:0,30,321	0/0:8,0:8:7.27:0,7,55	0/0:5,0:5:8.56:0,9,43	0/0:12,0:12:33.05:0,33,343	0/0:13,0:13:39.10:0,39,418	0/0:4,0:4:12.01:0,12,120	0/0:39,0:39:99:0,105,1116	0/0:28,0:27:60.14:0,60,642	0/0:15,0:15:41.42:0,41,401	0/0:11,0:11:27.07:0,27,289	0/0:12,0:12:36.08:0,36,379	0/0:10,0:10:20.58:0,21,136	0/0:14,0:14:20.09:0,20,122	0/0:11,0:7:7.40:0,7,40	0/0:12,0:12:36.09:0,36,385	0/0:20,0:19:54.10:0,54,567	0/0:13,0:13:33.04:0,33,337	0/0:15,0:15:30.03:0,30,310
chr10	76240689	.	GACACACACAC	G	2129.04	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=7.041;DP=619;FS=11.984;HRun=0;HaplotypeScore=175.2136;InbreedingCoeff=0.8691;MQ=54.86;MQ0=12;MQRankSum=-6.755;QD=14.39;ReadPosRankSum=-1.399;VQSLOD=1.7318;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:39:72.25:0,72,2902	0/0:6,0:7:15.05:0,15,663	./.	0/0:36,0:15:9.03:0,9,157	0/0:13,0:17:24.08:0,24,992	0/0:13,0:13:8.90:0,9,186	0/0:18,0:18:21.05:0,21,777	0/0:15,0:15:15.05:0,15,457	1/1:14,13:27:32.61:905,33,0	0/0:17,0:18:39.13:0,39,1420	0/0:12,0:11:6.49:0,6,301	1/1:17,8:26:18.53:517,19,0	1/1:7,8:17:18.06:499,18,0	0/0:15,0:19:36.59:0,37,1383	0/0:21,0:22:33.10:0,33,1176	0/0:10,0:13:30.10:0,30,1148	0/0:28,0:29:51.17:0,51,2081	0/0:23,0:23:27.09:0,27,1133	0/0:12,0:12:16.26:0,16,366	0/0:21,0:22:36.12:0,36,1530	0/0:70,0:72:99:0,112,3910	1/1:11,6:18:6.49:177,6,0	1/1:17,6:24:9.50:185,10,0	1/1:23,11:36:2.47:14,2,0	0/0:11,0:13:27.09:0,27,1103	0/0:15,0:15:30.10:0,30,1037	0/0:12,0:15:15.05:0,15,476	0/0:8,0:12:27.09:0,27,1020
chr10	76241256	.	TACACACACACACACAC	T	3498.79	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=8.269;DP=496;FS=17.264;HRun=0;HaplotypeScore=200.2612;InbreedingCoeff=0.8927;MQ=60.41;MQ0=17;MQRankSum=-7.754;QD=30.16;ReadPosRankSum=0.194;VQSLOD=1.7943;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:30:35.49:0,35,652	0/0:9,0:9:12.04:0,12,749	./.	./.	0/0:10,0:15:17.98:0,18,1200	0/0:17,0:17:42.14:0,42,2571	0/0:13,0:12:9.03:0,9,658	0/0:23,0:23:6.48:0,6,141	1/1:14,13:27:29.81:1159,30,0	0/0:14,0:14:26.12:0,26,1122	0/0:11,0:15:21.07:0,21,1110	1/1:12,3:16:12.03:392,12,0	1/1:7,8:15:21.07:831,21,0	0/0:10,0:10:21.07:0,21,1281	0/0:13,0:12:30.08:0,30,1810	0/0:8,0:8:18.06:0,18,715	0/0:26,0:30:45.13:0,45,2751	0/0:13,0:13:25.33:0,25,1611	0/0:10,0:10:9.03:0,9,657	0/0:18,0:18:30.10:0,30,1821	0/0:18,0:18:21.07:0,21,1086	1/1:13,7:20:14.97:415,15,0	1/1:13,7:20:21.03:570,21,0	1/1:10,6:16:3.01:131,3,0	0/0:9,0:9:15.05:0,15,966	0/0:24,0:23:42.13:0,42,2042	0/0:19,0:19:36.12:0,36,2576	0/0:21,0:20:39.13:0,39,2720
chr10	76241616	.	CT	C	579.87	PASS	AB=0.803;AC=17;AF=0.304;AN=56;BaseQRankSum=4.960;DP=465;FS=0.549;HRun=16;HaplotypeScore=56.0816;InbreedingCoeff=0.5142;MQ=64.81;MQ0=5;MQRankSum=-0.044;QD=3.81;ReadPosRankSum=4.120;VQSLOD=-0.1259;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,14:28:23.18:234,23,0	0/0:9,0:9:11.99:0,12,101	0/0:19,0:9:11.32:0,11,72	0/0:17,0:14:6.80:0,7,31	0/1:12,2:14:5.61:6,0,165	0/1:14,3:17:9.17:9,0,135	0/0:14,0:13:11.95:0,12,92	0/0:23,1:23:6.40:0,6,144	1/1:6,7:13:26.19:155,26,0	0/0:18,0:17:17.92:0,18,140	0/0:15,0:15:32.83:0,33,256	1/1:3,8:11:17.53:103,18,0	1/1:7,7:15:16.69:95,17,0	0/1:8,2:11:12.15:12,0,100	0/0:7,0:8:17.78:0,18,132	0/0:10,0:10:11.97:0,12,97	0/0:24,1:25:47.93:0,48,398	0/0:20,2:23:5.92:0,6,213	0/0:22,0:18:20.87:0,21,160	0/0:16,1:19:9.99:0,10,166	0/1:8,2:10:6.12:6,0,52	1/1:7,4:11:2.82:18,3,0	1/1:4,6:9:13.73:78,14,0	0/1:4,6:11:11.34:46,0,11	0/0:12,0:13:15.34:0,15,112	0/0:21,1:22:23.90:0,24,300	0/0:34,0:36:49.88:0,50,422	0/0:17,0:19:35.71:0,36,274
chr10	76241896	.	TC	T	1797.05	PASS	AB=0.955;AC=15;AF=0.268;AN=56;BaseQRankSum=1.558;DP=528;FS=1.475;HRun=10;HaplotypeScore=124.9702;InbreedingCoeff=0.7352;MQ=69.42;MQ0=0;MQRankSum=-6.968;QD=12.48;ReadPosRankSum=1.044;VQSLOD=2.9672;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,137,1012	0/0:12,1:13:3.86:0,4,252	0/0:20,0:20:16.71:0,17,323	0/1:13,0:13:36.15:36,0,57	0/1:12,1:12:5.03:5,0,160	0/0:17,0:17:30.07:0,30,324	0/0:28,1:29:40.06:0,40,618	0/0:22,0:23:33.07:0,33,349	1/1:2,19:21:59.94:510,60,0	0/0:9,0:9:15.03:0,15,155	0/0:10,0:11:13.67:0,14,182	1/1:9,9:18:35.87:293,36,0	1/1:2,11:13:32.98:286,33,0	0/0:18,0:18:45.02:0,45,458	0/0:24,0:24:39.97:0,40,418	0/0:21,0:21:45.10:0,45,481	0/0:13,0:13:29.70:0,30,315	0/0:13,0:13:33:0,33,317	0/1:13,1:15:3.23:3,0,272	0/0:19,0:19:35.92:0,36,337	0/0:31,1:32:48.91:0,49,681	1/1:6,7:12:23.96:208,24,0	1/1:7,8:15:32.83:262,33,0	1/1:7,16:23:44.92:382,45,0	0/0:11,0:10:14.97:0,15,140	0/0:20,0:20:30.06:0,30,317	0/0:32,0:31:72.53:0,73,743	0/0:5,0:5:14.99:0,15,145
chr10	76242308	.	TA	T	1187.90	PASS	AB=0.600;AC=11;AF=0.196;AN=56;BaseQRankSum=6.360;DP=505;FS=6.933;HRun=10;HaplotypeScore=54.8114;InbreedingCoeff=0.8197;MQ=64.00;MQ0=9;MQRankSum=3.420;QD=18.00;ReadPosRankSum=2.376;VQSLOD=4.2450;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.09:0,54,575	0/0:5,0:5:15.04:0,15,166	0/0:38,0:11:17.67:0,18,142	0/0:37,0:20:22.70:0,23,252	0/0:32,0:32:84.22:0,84,921	0/0:11,1:12:1.02:0,1,239	0/0:12,0:12:30.04:0,30,318	0/0:26,0:25:69.17:0,69,750	1/1:1,12:13:32.99:286,33,0	0/0:13,0:13:33.08:0,33,360	0/0:17,0:17:45.12:0,45,498	1/1:1,12:13:29.98:260,30,0	1/1:1,13:14:38.99:339,39,0	0/0:11,0:11:27.07:0,27,299	0/0:15,1:16:13.05:0,13,372	0/0:17,0:17:45.11:0,45,489	0/0:24,1:25:43.14:0,43,704	0/0:24,0:24:57.15:0,57,631	0/0:16,0:15:36.29:0,36,370	0/0:20,0:20:54.13:0,54,589	0/0:7,0:7:18.05:0,18,199	1/1:1,3:4:9:78,9,0	1/1:1,12:13:32.99:286,33,0	0/1:3,6:9:15.19:112,0,15	0/0:22,0:22:57.10:0,57,608	0/0:24,0:24:51.05:0,51,544	0/0:21,0:21:63.17:0,63,697	0/0:18,0:18:47.80:0,48,509
chr10	76244915	.	CCAGCAT	C	2065.37	PASS	AB=0.747;AC=21;AF=0.404;AN=52;BaseQRankSum=0.215;DP=357;FS=8.135;HRun=0;HaplotypeScore=143.2392;InbreedingCoeff=-0.4957;MQ=88.16;MQ0=0;MQRankSum=-2.385;QD=7.40;ReadPosRankSum=0.223;VQSLOD=2.1045;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:4,8:12:78.40:94,0,78	./.	0/1:22,0:18:99:118,0,1243	0/1:21,1:17:99:121,0,890	0/0:5,3:8:2.57:0,3,102	0/1:6,8:14:99:195,0,118	0/0:14,2:16:1.53:0,2,295	0/1:13,3:16:99:159,0,937	0/1:7,8:15:99:200,0,244	0/1:11,4:15:99:228,0,620	0/0:8,2:10:8.35:0,8,197	0/1:5,5:10:90.69:91,0,117	0/1:10,5:15:99:169,0,264	0/1:1,13:14:29.73:30,0,66	0/1:3,8:11:42.03:42,0,62	0/1:9,3:12:99:151,0,374	1/1:4,7:11:7.41:122,7,0	0/1:9,3:12:99:166,0,192	0/0:10,0:10:15.05:0,15,484	0/0:3,4:7:5.51:0,6,205	0/1:18,9:27:23.92:90,0,24	0/0:9,3:12:3.04:0,3,238	0/0:9,3:12:21.07:0,21,543	1/1:6,5:11:0.46:1,0,0	0/1:12,5:17:6.69:7,0,268	0/1:8,3:11:99:160,0,627	0/1:9,3:12:66.13:66,0,280	./.
chr10	76244920	.	A	ATCC	320.55	PASS	AB=0.990;AC=15;AF=0.288;AN=52;BaseQRankSum=1.959;DP=415;FS=4.960;HRun=0;HaplotypeScore=168.2915;InbreedingCoeff=-0.2243;MQ=87.68;MQ0=0;MQRankSum=1.030;QD=1.25;ReadPosRankSum=-4.711;VQSLOD=0.4208;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:17.45:17,0,37	./.	0/1:26,0:22:23.30:23,0,676	0/1:22,1:19:99:141,0,553	0/0:8,0:8:2.89:0,3,51	0/1:16,0:16:38.69:39,0,137	0/1:16,1:17:26.21:26,0,183	0/0:25,0:25:7.86:0,8,580	0/1:18,0:18:0.77:1,0,198	0/1:16,0:16:12.36:12,0,411	0/0:12,0:12:7.57:0,8,118	0/0:12,0:12:7.01:0,7,94	0/1:17,0:17:44.40:44,0,113	0/1:15,0:15:8.86:9,0,79	0/0:14,0:14:7.47:0,7,73	0/0:12,0:12:5.68:0,6,266	0/0:14,0:14:3.25:0,3,10	0/1:13,0:13:31.68:32,0,150	0/0:11,0:11:18.06:0,18,305	0/0:7,0:7:5.98:0,6,102	1/1:34,2:36:8.88:56,9,0	0/1:13,0:13:23.04:23,0,138	0/0:13,0:13:20.76:0,21,285	0/1:12,0:12:0:1,0,0	0/1:19,0:19:36.37:36,0,156	0/0:14,0:14:14.58:0,15,400	0/0:14,0:14:7.10:0,7,220	./.
chr10	76244951	.	T	TCAC	832.38	PASS	AB=0.918;AC=11;AF=0.196;AN=56;BaseQRankSum=7.791;DP=598;FS=27.242;HRun=0;HaplotypeScore=191.9964;InbreedingCoeff=-0.2577;MQ=84.82;MQ0=0;MQRankSum=-4.558;QD=3.14;ReadPosRankSum=-0.041;VQSLOD=0.9000;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,1:31:78.18:0,78,1274	0/0:8,0:8:17.14:0,17,315	0/1:32,0:37:14.18:14,0,1120	0/1:31,1:36:83.58:84,0,748	0/0:11,1:12:17.89:0,18,279	0/1:22,3:25:96.53:97,0,804	0/1:23,2:25:61.47:61,0,637	0/1:26,0:27:30.87:31,0,873	0/1:28,2:30:24.07:24,0,1283	0/1:19,2:21:99:131,0,727	0/0:12,2:14:23.66:0,24,361	0/0:12,1:13:36.12:0,36,592	0/0:19,5:24:59.67:0,60,908	0/0:21,0:22:27.56:0,28,476	0/0:17,1:18:39.12:0,39,641	0/1:9,5:14:99:221,0,403	0/0:26,0:26:64.51:0,65,1152	0/0:19,0:19:7.72:0,8,652	0/1:15,0:15:86.79:87,0,372	0/0:13,1:14:19.26:0,19,320	0/0:47,1:48:11.20:0,11,1017	0/0:13,1:15:13.78:0,14,229	0/0:17,0:18:21.76:0,22,244	0/0:26,0:26:45.60:0,46,747	0/0:21,0:22:32.92:0,33,503	0/1:17,2:19:99:142,0,541	0/1:11,3:15:87.63:88,0,355	0/0:3,0:3:6.02:0,6,105
chr10	76244956	.	A	ACCT	453.87	PASS	AB=0.887;AC=8;AF=0.143;AN=56;BaseQRankSum=8.074;DP=575;FS=11.330;HRun=0;HaplotypeScore=171.1570;InbreedingCoeff=-0.1705;MQ=88.08;MQ0=0;MQRankSum=-1.531;QD=2.49;ReadPosRankSum=-0.073;VQSLOD=2.1427;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:34:84.22:0,84,1464	0/0:6,0:6:18.06:0,18,335	0/0:40,0:40:22.54:0,23,1395	0/1:36,0:36:18.17:18,0,929	0/0:16,1:17:24.07:0,24,403	0/1:24,3:27:61.18:61,0,853	0/1:21,2:23:14.12:14,0,801	0/0:22,0:22:63.12:0,63,1031	0/1:28,2:30:13.50:14,0,1454	0/1:18,2:20:99:107,0,806	0/0:11,2:13:20.74:0,21,391	0/0:12,1:13:39.13:0,39,685	0/0:19,5:24:43.10:0,43,945	0/0:22,0:22:33.06:0,33,588	0/0:17,1:18:29.19:0,29,709	0/1:9,5:14:99:210,0,424	0/0:25,0:25:72.25:0,72,1303	0/0:18,0:18:48.13:0,48,815	0/0:11,0:11:33.10:0,33,572	0/0:14,1:15:21.03:0,21,384	0/0:48,1:49:84.90:0,85,1437	0/0:10,1:11:11.78:0,12,223	0/0:12,0:12:14.62:0,15,240	0/0:26,0:26:60.54:0,61,976	0/0:14,0:14:29.62:0,30,539	0/1:14,2:16:87.32:87,0,551	0/1:12,3:15:77.55:78,0,450	0/0:3,0:3:9.01:0,9,125
chr10	76247874	.	T	TA	455.72	PASS	AB=0.976;AC=4;AF=0.071;AN=56;BaseQRankSum=-4.238;DP=529;FS=0.000;HRun=12;HaplotypeScore=59.5618;InbreedingCoeff=0.4352;MQ=60.80;MQ0=8;MQRankSum=-1.037;QD=6.80;ReadPosRankSum=-0.904;VQSLOD=1.6101;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:31:56.93:540,57,0	0/0:14,0:14:32.78:0,33,239	0/1:16,0:4:13.61:14,0,15	0/0:11,0:7:10.48:0,10,51	0/1:17,1:19:15.53:16,0,208	0/0:22,0:23:40.64:0,41,281	0/0:16,0:16:29.74:0,30,215	0/0:29,0:30:64.50:0,65,458	0/0:18,0:18:35.64:0,36,258	0/0:23,1:22:21.53:0,22,320	0/0:25,0:27:58.44:0,58,412	0/0:10,0:10:17.81:0,18,126	0/0:10,0:10:23.84:0,24,175	0/0:14,0:14:35.74:0,36,259	0/0:15,0:15:29.77:0,30,219	0/0:23,0:23:56.61:0,57,414	0/0:23,0:22:44.62:0,45,321	0/0:15,0:14:35.71:0,36,258	0/0:21,0:21:43.73:0,44,310	0/0:32,1:34:56.27:0,56,563	0/0:13,0:13:25.81:0,26,177	0/0:14,0:14:18.07:0,18,217	0/0:18,0:18:35.70:0,36,263	0/0:12,0:13:28.85:0,29,203	0/0:18,0:18:44.47:0,44,319	0/0:19,0:21:39.79:0,40,274	0/0:19,0:20:46.65:0,47,329	0/0:13,1:15:5.63:0,6,191
chr10	76250756	.	AACAC	A	993.39	PASS	AB=0.892;AC=26;AF=0.565;AN=46;BaseQRankSum=1.319;DP=539;FS=14.341;HRun=0;HaplotypeScore=98.9844;InbreedingCoeff=0.1271;MQ=51.74;MQ0=30;MQRankSum=-1.190;QD=3.18;ReadPosRankSum=2.618;VQSLOD=0.6964;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:9,0:11:3.59:62,0,4	./.	./.	1/1:8,0:11:3.47:29,3,0	0/0:18,0:17:2.89:0,3,25	1/1:24,1:24:4.71:62,5,0	0/0:19,0:17:0:0,0,0	0/1:12,0:13:19.02:19,0,21	0/1:23,0:21:2.49:37,0,2	1/1:6,1:10:2.96:21,3,0	0/1:8,0:12:5.95:72,0,6	1/1:11,0:13:9.01:88,9,0	0/1:14,4:17:17.86:18,0,38	0/0:16,0:16:11.83:0,12,305	0/1:15,1:17:3.94:83,0,4	0/0:21,0:22:14.41:0,14,161	0/1:27,0:27:2.34:57,0,2	0/0:12,0:12:0:0,0,0	1/1:13,7:21:8.51:211,9,0	1/1:30,10:38:5.98:65,6,0	./.	1/1:8,0:8:0.89:2,1,0	0/0:33,0:33:2.86:0,3,24	1/1:13,5:16:9.03:137,9,0	./.	0/1:25,0:25:2.53:54,0,3	1/1:15,2:17:5.03:105,5,0
chr10	76251491	.	G	GACAC	535.37	PASS	AB=1.000;AC=15;AF=0.341;AN=44;BaseQRankSum=1.782;DP=302;FS=0.000;HRun=0;HaplotypeScore=67.5975;InbreedingCoeff=0.4542;MQ=52.55;MQ0=9;MQRankSum=-1.286;QD=5.82;ReadPosRankSum=-4.928;VQSLOD=0.1941;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:15.01:0,15,170	0/0:0,0:1:3:0,3,28	./.	./.	0/0:3,0:5:6.01:0,6,56	./.	0/0:13,0:16:15.02:0,15,155	1/1:15,0:15:3.01:44,3,0	0/0:6,0:9:12.01:0,12,111	1/1:6,0:6:0.47:1,0,0	1/1:2,0:8:5.49:24,5,0	0/0:2,0:4:3:0,3,28	0/0:2,0:3:3:0,3,27	0/0:5,0:7:6.01:0,6,74	./.	./.	0/0:19,0:21:11.58:0,12,208	0/0:10,0:11:11.08:0,11,166	0/1:12,0:12:19.95:21,0,20	./.	1/1:11,4:17:3.01:70,3,0	0/0:4,0:6:3:0,3,28	0/0:2,0:6:9.01:0,9,84	0/0:6,0:7:2.74:0,3,12	0/0:8,0:10:9.01:0,9,102	1/1:12,3:18:24.04:370,24,0	1/1:6,2:8:3.01:70,3,0	1/1:6,1:7:3.01:70,3,0
chr10	76251571	.	A	ATC	1189.22	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-3.179;DP=311;FS=9.889;HRun=0;HaplotypeScore=42.4369;InbreedingCoeff=0.8342;MQ=74.89;MQ0=1;MQRankSum=-0.338;QD=29.73;ReadPosRankSum=-0.669;VQSLOD=4.2593;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:53.19:0,53,715	0/0:1,0:1:3.01:0,3,43	0/0:8,0:7:9.03:0,9,129	0/0:12,0:7:2.04:0,2,75	0/0:12,0:12:33.04:0,33,394	0/0:13,0:13:39.12:0,39,542	0/0:7,0:7:21.07:0,21,299	0/0:21,0:21:54.16:0,54,727	1/1:3,10:13:27.04:456,27,0	0/0:13,0:13:39.11:0,39,539	0/0:13,0:13:39.08:0,39,518	1/1:0,10:11:21.07:382,21,0	1/1:2,3:6:14.57:191,15,0	0/0:9,0:9:27.06:0,27,364	0/0:5,0:5:15.05:0,15,215	0/0:8,0:8:24.05:0,24,306	0/0:11,0:11:23.99:0,24,297	0/0:13,0:13:36.10:0,36,495	0/0:19,0:19:45.10:0,45,588	0/0:11,0:11:33.11:0,33,472	0/0:7,0:7:18.05:0,18,240	1/1:0,1:1:3.01:55,3,0	1/1:2,2:4:6.02:109,6,0	1/1:0,5:5:9.03:164,9,0	0/0:19,0:19:54.13:0,54,689	0/0:17,0:17:51.16:0,51,711	0/0:17,0:17:48.03:0,48,639	0/0:13,0:13:30.07:0,30,391
chr10	76253868	.	TTCTCTC	T	1806.71	PASS	AB=0.902;AC=16;AF=0.286;AN=56;BaseQRankSum=4.062;DP=628;FS=4.289;HRun=0;HaplotypeScore=142.8979;InbreedingCoeff=0.6861;MQ=71.01;MQ0=6;MQRankSum=-5.870;QD=9.71;ReadPosRankSum=2.981;VQSLOD=2.0549;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:30:56.31:0,56,1327	0/0:11,0:11:9.03:0,9,150	0/0:27,0:23:6.02:0,6,107	0/0:33,0:23:6.49:0,6,118	0/0:9,0:9:6.02:0,6,171	0/1:24,0:24:42.98:43,0,332	0/0:24,0:25:35.87:0,36,986	0/0:32,0:31:9.03:0,9,161	1/1:16,6:23:36.11:635,36,0	0/0:26,0:25:24.08:0,24,588	0/0:14,0:14:12.04:0,12,344	1/1:15,3:19:18.02:299,18,0	1/1:13,2:15:13.39:253,13,0	0/0:19,0:19:24.08:0,24,703	0/1:26,1:32:11.72:12,0,1353	0/0:27,0:30:27.09:0,27,813	0/0:21,0:20:33.11:0,33,862	0/0:16,0:16:28.62:0,29,717	1/1:20,2:23:12.04:179,12,0	0/0:14,0:15:12.04:0,12,162	0/0:33,0:38:46.84:0,47,1241	1/1:16,2:18:6.02:122,6,0	1/1:8,5:14:20.99:329,21,0	1/1:13,3:16:6.02:122,6,0	0/0:15,0:15:6.02:0,6,112	0/0:24,0:24:43.02:0,43,906	0/0:29,0:30:11.32:0,11,297	0/0:20,0:22:32.14:0,32,701
chr10	76253973	.	GTC	G	210.33	PASS	AB=0.954;AC=14;AF=0.250;AN=56;BaseQRankSum=4.585;DP=826;FS=2.916;HRun=0;HaplotypeScore=113.1986;InbreedingCoeff=-0.2422;MQ=51.49;MQ0=35;MQRankSum=0.999;QD=0.54;ReadPosRankSum=-0.093;VQSLOD=2.3333;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,4:44:60.08:60,0,1133	0/0:17,1:18:9.79:0,10,566	0/0:52,0:8:8.70:0,9,98	0/0:90,0:16:6.02:0,6,91	0/1:23,2:25:20.32:20,0,653	0/0:20,1:21:12.41:0,12,660	0/0:22,0:22:12.60:0,13,654	0/1:37,0:29:34.78:35,0,791	0/0:23,0:23:23.33:0,23,253	0/1:35,1:36:72.81:73,0,1123	0/0:15,1:15:3.38:0,3,528	0/0:19,0:18:6.01:0,6,64	0/1:13,0:26:2.96:3,0,80	0/0:23,0:23:44.84:0,45,710	0/0:24,1:25:18.43:0,18,748	0/1:23,1:24:46.64:47,0,697	0/0:27,2:28:24.42:0,24,822	0/0:26,0:26:58.03:0,58,849	0/0:22,0:20:30.10:0,30,462	0/0:22,2:24:12.40:0,12,649	0/1:48,3:50:10.95:11,0,1372	0/1:22,0:21:3.61:4,0,51	0/0:20,0:20:11.61:0,12,113	1/1:21,0:22:0.73:2,1,0	0/1:22,1:23:19.35:19,0,664	0/1:35,3:37:26.02:26,0,1020	0/1:21,1:22:20.12:20,0,650	0/1:16,2:17:32.37:32,0,458
chr10	76254058	.	A	ATG	4179.04	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.057;DP=884;FS=7.748;HRun=0;HaplotypeScore=115.7156;InbreedingCoeff=0.9821;MQ=51.69;MQ0=31;MQRankSum=2.522;QD=23.88;ReadPosRankSum=3.022;VQSLOD=4.5145;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:78.23:0,78,1006	0/0:16,0:16:45.15:0,45,599	0/0:18,0:7:18.06:0,18,233	0/0:11,0:6:11.99:0,12,125	0/0:25,0:25:60.20:0,60,794	0/0:13,0:13:39.13:0,39,518	0/0:44,0:40:54.27:0,54,954	0/0:65,0:36:72.21:0,72,920	1/1:2,21:22:27.09:467,27,0	0/0:50,0:44:99:0,114,1485	0/0:17,0:17:48.16:0,48,638	1/1:3,33:37:36.12:623,36,0	1/1:5,17:21:45.14:747,45,0	0/0:23,0:23:51.49:0,51,663	0/0:33,0:33:87.28:0,87,1149	0/0:26,0:25:70.44:0,70,885	0/0:42,0:42:90.24:0,90,1333	0/0:29,0:29:10.52:0,11,776	0/0:18,0:12:24.05:0,24,279	0/0:26,0:26:69.16:0,69,901	0/0:107,0:101:99:0,216,2971	1/1:8,26:34:66.12:1107,66,0	1/1:3,17:20:21.07:364,21,0	1/1:8,31:38:42.01:871,42,0	0/0:17,0:17:39.30:0,39,590	0/0:43,0:37:99:0,99,1277	0/0:28,0:26:69.21:0,69,895	0/0:20,0:18:51.16:0,51,665
chr10	76254110	.	ATGTG	A	897.45	PASS	AB=0.963;AC=13;AF=0.250;AN=52;BaseQRankSum=4.815;DP=841;FS=9.398;HRun=0;HaplotypeScore=151.6884;InbreedingCoeff=0.7398;MQ=50.01;MQ0=32;MQRankSum=1.913;QD=3.79;ReadPosRankSum=-1.543;VQSLOD=1.8682;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:53,0:52:6.09:55,6,0	0/0:13,0:13:18.06:0,18,346	./.	./.	0/0:12,0:12:9.03:0,9,205	0/0:17,0:16:20.79:0,21,276	0/0:39,0:39:21.07:0,21,429	0/0:49,0:36:9.87:0,10,107	1/1:13,2:15:6.02:93,6,0	0/0:27,0:23:20.10:0,20,351	0/0:14,0:14:21.07:0,21,425	1/1:35,1:35:5.08:70,5,0	0/1:25,1:25:16.26:27,0,16	0/0:25,0:26:26.78:0,27,330	0/0:26,0:25:22.29:0,22,340	0/0:24,0:24:32.80:0,33,598	0/0:39,1:40:7.50:0,8,921	0/0:28,0:30:33.73:0,34,633	0/0:15,0:11:3.01:0,3,45	0/0:18,2:20:15.03:0,15,278	0/0:82,0:72:39.55:0,40,542	1/1:33,2:35:20.64:246,21,0	1/1:21,0:21:8.88:86,9,0	1/1:42,8:48:19:487,19,0	0/0:19,0:19:29.89:0,30,557	0/0:41,0:40:41.54:0,42,548	0/0:23,0:21:23.95:0,24,321	0/0:16,0:17:17.80:0,18,356
chr10	76255528	.	A	AT	738.10	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.222;DP=406;FS=0.000;HRun=9;HaplotypeScore=45.8675;InbreedingCoeff=0.8425;MQ=68.11;MQ0=2;MQRankSum=-0.355;QD=21.71;ReadPosRankSum=-0.567;VQSLOD=3.6538;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,26:33:78.09:833,78,0	0/0:6,0:6:14.99:0,15,130	0/0:15,0:10:8.24:0,8,93	0/0:21,0:12:17.91:0,18,147	0/0:12,0:12:35.81:0,36,294	0/0:15,0:15:38.99:0,39,338	0/0:15,0:15:38.97:0,39,334	0/0:29,0:29:48.31:0,48,470	0/0:12,0:11:32.99:0,33,286	0/0:20,0:20:47.95:0,48,411	0/0:10,0:9:26.97:0,27,230	0/0:4,0:4:12:0,12,103	0/0:10,0:9:26.99:0,27,234	0/0:5,0:5:12:0,12,104	0/0:14,0:14:35.85:0,36,312	0/0:6,0:6:18:0,18,156	0/0:32,0:32:88.68:0,89,741	0/0:19,0:18:47.92:0,48,404	0/0:26,0:26:59.91:0,60,510	0/0:10,0:10:26.98:0,27,231	0/0:11,0:11:32.48:0,32,266	0/0:8,0:8:17.99:0,18,156	0/0:12,0:12:32.99:0,33,286	0/0:10,0:10:20.97:0,21,179	0/0:12,0:12:26.96:0,27,227	0/0:21,0:21:50.98:0,51,443	0/0:7,0:7:21:0,21,182	0/0:10,0:10:26.84:0,27,222
chr10	76256391	.	GAA	G	2307.81	PASS	AB=0.917;AC=15;AF=0.268;AN=56;BaseQRankSum=6.026;DP=569;FS=10.193;HRun=13;HaplotypeScore=71.7586;InbreedingCoeff=0.8938;MQ=57.95;MQ0=22;MQRankSum=3.256;QD=13.90;ReadPosRankSum=5.589;VQSLOD=1.5847;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,32:45:47.78:664,48,0	0/0:6,0:7:14.36:0,14,130	0/1:20,1:11:32.85:33,0,186	0/0:15,0:6:10.86:0,11,73	0/0:21,0:22:27.46:0,27,554	0/0:17,0:18:47.58:0,48,619	0/0:15,0:15:42.09:0,42,561	0/0:32,0:30:63.55:0,64,780	1/1:4,13:17:32.97:368,33,0	0/0:13,0:13:33.05:0,33,421	0/0:13,0:14:27.96:0,28,361	1/1:7,10:16:26.96:261,27,0	1/1:2,6:8:18:174,18,0	0/0:17,0:17:33.09:0,33,457	0/0:20,1:21:19.04:0,19,591	0/0:23,0:26:62.64:0,63,805	0/0:33,0:35:87.91:0,88,1125	0/0:25,0:22:48.13:0,48,633	0/0:29,0:31:71.64:0,72,866	0/0:22,1:26:56.41:0,56,667	0/0:10,0:10:24.05:0,24,296	1/1:3,21:23:50.98:542,51,0	1/1:6,12:17:30:291,30,0	1/1:4,9:11:18.02:174,18,0	0/0:10,0:11:22.84:0,23,270	0/0:19,0:22:57.39:0,57,656	0/0:18,0:22:52.63:0,53,568	0/0:13,0:15:44.53:0,45,555
chr10	76256701	.	G	GTA	9380.50	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-14.455;DP=719;FS=4.878;HRun=0;HaplotypeScore=80.9981;InbreedingCoeff=0.9994;MQ=83.76;MQ0=2;MQRankSum=-5.290;QD=46.44;ReadPosRankSum=3.777;VQSLOD=6.4649;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,45:46:99:2303,123,0	0/0:8,0:8:24.05:0,24,314	0/0:23,0:23:47.59:0,48,808	0/0:25,0:25:69.13:0,69,936	0/0:21,0:21:57.16:0,57,798	0/0:19,0:19:57.18:0,57,817	0/0:24,0:24:69.20:0,69,966	0/0:30,0:30:90.30:0,90,1308	1/1:1,25:27:66.23:1236,66,0	0/0:29,0:29:84.28:0,84,1221	0/0:12,0:12:33.10:0,33,468	1/1:1,32:34:75.26:1404,75,0	1/1:1,29:29:78.27:1460,78,0	0/0:26,0:26:78.26:0,78,1128	0/0:34,0:34:99:0,102,1483	0/0:24,0:24:72.23:0,72,1040	0/0:41,0:41:99:0,117,1720	0/0:20,0:20:60.20:0,60,873	0/0:26,0:26:66.22:0,66,964	0/0:19,0:19:54.18:0,54,792	0/0:50,0:50:99:0,123,1784	1/1:0,16:17:39.13:730,39,0	1/1:0,13:13:39.13:730,39,0	1/1:0,32:34:81.28:1517,81,0	0/0:15,0:15:42.14:0,42,618	0/0:32,0:32:87.29:0,87,1281	0/0:29,0:29:84.28:0,84,1222	0/0:10,0:10:27.09:0,27,397
chr10	76257546	.	CT	C	446.13	PASS	AB=0.789;AC=11;AF=0.196;AN=56;BaseQRankSum=3.567;DP=497;FS=1.782;HRun=16;HaplotypeScore=72.5194;InbreedingCoeff=-0.0644;MQ=80.64;MQ0=3;MQRankSum=0.171;QD=2.49;ReadPosRankSum=5.104;VQSLOD=-0.6583;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,11:26:10.57:156,11,0	0/1:4,1:5:6.03:6,0,59	0/0:24,0:14:6.98:0,7,64	0/0:21,0:19:26.07:0,26,142	0/1:21,3:25:19.09:19,0,133	0/0:22,0:22:35.84:0,36,286	0/0:12,0:15:24.05:0,24,163	0/0:20,1:22:21.75:0,22,247	0/1:16,2:19:26.39:57,0,26	0/1:20,2:22:6.25:6,0,154	0/0:16,0:16:33.41:0,33,272	0/1:11,4:16:21.74:67,0,22	0/1:14,3:18:10.40:62,0,10	0/0:13,0:13:22.34:0,22,147	0/0:15,1:18:11.69:0,12,164	0/0:18,0:22:38.75:0,39,304	0/0:21,3:24:2.68:0,3,206	0/0:13,0:16:24.27:0,24,188	0/0:22,1:23:16.34:0,16,202	0/0:18,1:19:20.79:0,21,261	0/0:9,0:9:6.46:0,6,51	0/1:12,9:21:39.51:81,0,40	0/1:8,7:15:27.31:69,0,27	0/1:5,7:12:24.36:68,0,24	0/0:12,1:13:0.41:0,0,103	0/0:8,1:10:5.93:0,6,149	0/0:18,2:20:14.32:0,14,184	0/0:5,0:7:14.83:0,15,115
chr10	76258287	.	G	GT	626.68	PASS	AB=0.809;AC=12;AF=0.214;AN=56;BaseQRankSum=-4.109;DP=519;FS=0.000;HRun=13;HaplotypeScore=65.1632;InbreedingCoeff=0.6271;MQ=64.15;MQ0=9;MQRankSum=0.151;QD=5.80;ReadPosRankSum=0.019;VQSLOD=1.9096;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:32:43.40:0,43,138	0/0:8,0:8:9.31:0,9,60	0/0:15,0:9:2.75:0,3,20	0/0:8,0:6:2.16:0,2,7	0/0:16,0:15:29.61:0,30,199	0/0:11,0:10:26.78:0,27,185	0/0:15,0:16:34.67:0,35,230	0/0:31,0:28:56.69:0,57,366	0/1:9,7:15:5.57:96,0,6	0/0:26,0:26:55.96:0,56,375	0/0:19,1:20:3.55:0,4,178	1/1:5,14:19:6.45:202,6,0	1/1:4,11:15:17.72:152,18,0	0/0:14,0:16:35.72:0,36,236	0/1:21,2:24:11.12:11,0,229	0/0:8,0:8:21.21:0,21,132	0/0:35,0:38:39.93:0,40,490	0/0:24,0:25:50.37:0,50,336	0/0:17,1:16:6.65:0,7,178	0/0:17,1:20:39.85:0,40,292	0/0:14,0:15:22.51:0,23,140	1/1:6,3:9:6.01:55,6,0	1/1:4,7:11:3.76:75,4,0	1/1:4,10:14:21.02:195,21,0	0/0:20,0:20:29.61:0,30,202	0/0:30,3:31:49.28:0,49,477	0/0:24,0:24:56.45:0,56,390	0/0:9,0:9:20.67:0,21,137
chr10	76259047	.	TTG	T	2716.23	PASS	AB=0.625;AC=51;AF=0.981;AN=52;BaseQRankSum=-0.340;DP=501;FS=0.000;HRun=0;HaplotypeScore=67.1160;InbreedingCoeff=-0.0369;MQ=48.18;MQ0=29;MQRankSum=1.392;QD=5.79;ReadPosRankSum=1.608;VQSLOD=2.6689;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:25:13.61:61,14,0	1/1:3,3:6:9.03:101,9,0	./.	./.	1/1:6,7:12:11.99:117,12,0	1/1:14,7:18:6.02:67,6,0	1/1:10,3:13:5.98:53,6,0	1/1:21,8:26:20.94:173,21,0	1/1:9,0:15:11.36:56,11,0	1/1:14,8:23:23.84:221,24,0	1/1:8,6:14:6.02:67,6,0	1/1:6,0:9:5.68:28,6,0	1/1:12,0:18:16.80:79,17,0	1/1:10,6:15:12.03:134,12,0	1/1:10,10:16:9.03:101,9,0	1/1:12,7:19:11.86:115,12,0	1/1:10,14:24:18.05:201,18,0	1/1:1,6:8:14.71:128,15,0	1/1:12,5:16:11.99:120,12,0	0/1:6,9:15:4.99:75,0,5	1/1:17,13:30:23.86:235,24,0	1/1:9,0:16:11.36:55,11,0	1/1:9,0:15:2.37:13,2,0	1/1:11,0:19:11.35:56,11,0	1/1:2,10:12:15:154,15,0	1/1:14,7:20:14.96:140,15,0	1/1:15,10:24:14.91:140,15,0	1/1:8,3:10:11.96:107,12,0
chr10	76259163	.	GA	G	272.87	PASS	AC=10;AF=0.217;AN=46;BaseQRankSum=1.980;DP=234;FS=0.000;HRun=10;HaplotypeScore=39.1593;InbreedingCoeff=0.6574;MQ=27.75;MQ0=36;MQRankSum=-2.072;QD=5.15;ReadPosRankSum=-0.848;VQSLOD=-0.1644;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,1:3:3.01:0,3,33	0/0:6,0:5:12.03:0,12,133	./.	./.	0/0:9,0:5:3.48:0,3,34	0/0:7,0:4:6.02:0,6,66	0/0:4,0:3:6.02:0,6,66	0/0:10,1:8:15:0,15,152	1/1:1,6:5:12:104,12,0	0/0:5,1:6:12.03:0,12,133	0/0:10,0:9:9.02:0,9,99	1/1:2,12:11:11.99:104,12,0	1/1:2,12:11:11.86:104,12,0	0/0:9,0:8:9.02:0,9,99	0/0:13,0:7:3.01:0,3,33	0/0:7,0:6:9.02:0,9,99	0/0:4,0:4:6.02:0,6,66	./.	0/0:5,0:5:15.04:0,15,166	0/0:16,0:13:30.08:0,30,332	./.	1/1:1,6:6:6:52,6,0	1/1:1,10:6:6:52,6,0	./.	0/0:8,0:6:9.02:0,9,99	0/0:13,0:12:33.09:0,33,365	0/0:13,0:12:15.04:0,15,166	0/0:6,0:4:6.02:0,6,66
chr10	76259755	.	TTG	T	283.78	PASS	AB=0.563;AC=25;AF=0.962;AN=26;DP=100;FS=0.000;HRun=0;HaplotypeScore=18.6298;InbreedingCoeff=-0.0174;MQ=23.43;MQ0=23;QD=5.07;VQSLOD=1.1813;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:5:11.36:56,11,0	1/1:0,1:1:3.01:32,3,0	./.	./.	./.	1/1:0,3:2:3.01:34,3,0	./.	./.	./.	1/1:2,2:3:3.01:33,3,0	1/1:2,3:2:3.01:34,3,0	1/1:2,0:1:2.84:14,3,0	1/1:2,0:3:5.39:27,5,0	./.	0/1:2,7:6:0:0,0,0	1/1:0,2:2:3.01:34,3,0	./.	./.	./.	./.	./.	1/1:3,0:3:2.84:14,3,0	1/1:2,0:4:2.69:14,3,0	./.	1/1:1,3:3:3.01:32,3,0	./.	./.	1/1:0,1:1:3.01:32,3,0
chr10	76259871	.	GA	G	1136.88	PASS	AB=0.667;AC=13;AF=0.250;AN=52;BaseQRankSum=4.875;DP=405;FS=4.009;HRun=10;HaplotypeScore=48.2664;InbreedingCoeff=0.8650;MQ=38.80;MQ0=40;MQRankSum=1.919;QD=11.84;ReadPosRankSum=2.159;VQSLOD=2.8758;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:51.05:0,51,527	0/0:4,0:4:11.96:0,12,107	./.	./.	0/0:11,0:12:20.98:0,21,206	0/0:20,0:19:33.02:0,33,339	0/0:19,0:18:54.09:0,54,575	0/0:14,0:11:30.05:0,30,313	1/1:0,15:15:23.99:208,24,0	0/0:17,0:17:42.11:0,42,462	0/0:8,0:8:9.50:0,9,101	1/1:2,14:16:23.80:208,24,0	1/1:1,11:11:21:182,21,0	0/0:8,0:8:21.02:0,21,220	0/0:13,0:11:23.98:0,24,239	0/0:12,0:12:36.10:0,36,398	0/0:22,0:20:48.10:0,48,518	0/0:16,0:14:30.02:0,30,307	0/0:11,0:11:27.07:0,27,299	0/0:10,1:11:18.05:0,18,199	0/0:21,0:18:42.11:0,42,464	1/1:0,15:15:14.63:129,15,0	1/1:0,12:12:18:156,18,0	1/1:2,22:24:47.98:417,48,0	0/0:9,0:8:11.99:0,12,119	0/0:24,0:20:42.11:0,42,464	0/0:12,0:11:17.92:0,18,199	0/1:1,1:2:20.03:20,0,27
chr10	76261285	.	G	GAA	2678.34	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.555;DP=592;FS=9.919;HRun=0;HaplotypeScore=87.0288;InbreedingCoeff=0.9811;MQ=67.07;MQ0=22;MQRankSum=-2.955;QD=19.27;ReadPosRankSum=1.736;VQSLOD=3.0777;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:43:54.78:405,55,0	0/0:9,0:9:24.08:0,24,381	0/0:52,0:17:37.79:0,38,511	0/0:48,0:22:38.50:0,39,478	0/0:15,0:15:45.15:0,45,727	0/0:16,0:16:33.11:0,33,518	0/0:17,0:17:45.08:0,45,638	0/0:26,0:26:72.19:0,72,1063	1/1:5,13:20:38.89:511,39,0	0/0:24,0:24:72.24:0,72,1126	0/0:9,0:9:27.09:0,27,420	1/1:2,11:13:26.35:471,26,0	1/1:0,13:14:30.10:430,30,0	0/0:18,0:17:51.10:0,51,759	0/0:23,0:23:66.15:0,66,1012	0/0:15,0:15:45.15:0,45,722	0/0:37,0:37:98.37:0,98,1541	0/0:24,0:22:66.10:0,66,999	0/0:20,0:20:56.38:0,56,817	0/0:20,0:20:60.15:0,60,895	0/0:14,0:13:33.10:0,33,513	1/1:2,11:13:9.11:309,9,0	1/1:3,10:16:14.04:374,14,0	1/1:5,15:19:14.47:374,14,0	0/0:12,0:12:33.11:0,33,525	0/0:20,0:20:57.18:0,57,882	0/0:24,0:24:69.23:0,69,1108	0/0:8,0:8:24.08:0,24,380
chr10	76261757	.	ATG	A	1670.26	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.932;DP=773;FS=3.552;HRun=0;HaplotypeScore=86.1046;InbreedingCoeff=0.9998;MQ=82.24;MQ0=2;MQRankSum=-7.213;QD=30.37;ReadPosRankSum=3.399;VQSLOD=5.3505;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,51:53:99:1765,132,0	0/0:20,0:20:54.17:0,54,918	0/0:28,0:29:81.28:0,81,1382	0/0:29,0:28:78.25:0,78,1293	0/0:26,0:26:75.26:0,75,1301	0/0:23,0:23:60.21:0,60,1048	0/0:20,0:20:51.17:0,51,885	0/0:37,0:37:87.26:0,87,1419	0/0:29,0:29:84.27:0,84,1439	0/0:29,0:29:84.29:0,84,1467	0/0:24,0:24:69.21:0,69,1143	0/0:30,0:30:90.28:0,90,1520	0/0:18,0:18:51.17:0,51,893	0/0:18,0:18:51.16:0,51,865	0/0:35,0:35:99:0,102,1725	0/0:35,0:35:99:0,102,1755	0/0:43,0:43:99:0,117,1990	0/0:33,0:33:84.29:0,84,1472	0/0:29,0:28:81.25:0,81,1330	0/0:25,0:25:72.22:0,72,1232	0/0:31,0:31:93.27:0,93,1541	0/0:33,0:33:93.26:0,93,1543	0/0:17,0:17:45.15:0,45,784	0/0:24,0:24:72.20:0,72,1203	0/0:23,0:23:66.21:0,66,1129	0/0:25,1:26:37.66:0,38,1250	0/0:19,0:19:54.18:0,54,943	0/0:13,0:13:36.11:0,36,592
chr10	76261881	.	AG	A	1735.56	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.170;DP=753;FS=5.215;HRun=2;HaplotypeScore=80.1080;InbreedingCoeff=0.9997;MQ=87.73;MQ0=0;MQRankSum=-5.859;QD=34.71;ReadPosRankSum=1.445;VQSLOD=4.1328;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,50:50:99:1830,141,0	0/0:16,0:16:42.13:0,42,605	0/0:25,0:25:51.43:0,51,817	0/0:29,0:29:70.59:0,71,907	0/0:31,0:31:90.27:0,90,1305	0/0:23,0:23:69.20:0,69,976	0/0:24,0:24:69.22:0,69,1013	0/0:34,0:34:99:0,99,1411	0/0:25,0:25:72.23:0,72,1057	0/0:36,0:36:99:0,108,1600	0/0:30,0:30:87.22:0,87,1229	0/0:30,0:30:90.30:0,90,1346	0/0:17,0:17:47.94:0,48,665	0/0:19,0:19:57.17:0,57,814	0/0:33,0:33:99:0,99,1445	0/0:25,0:25:75.22:0,75,1067	0/0:45,0:45:99:0,135,2021	0/0:17,0:17:48.13:0,48,693	0/0:20,0:20:57.19:0,57,849	0/0:16,0:16:45.15:0,45,674	0/0:37,0:37:99:0,109,1571	0/0:33,0:33:99:0,99,1462	0/0:28,0:28:81.27:0,81,1213	0/0:20,0:20:60.20:0,60,898	0/0:19,0:19:57.16:0,57,813	0/0:36,0:36:99:0,108,1613	0/0:24,0:24:69.22:0,69,1013	0/0:11,0:11:33.11:0,33,493
chr10	76262641	.	GA	G	1929.79	PASS	AB=0.866;AC=18;AF=0.346;AN=52;BaseQRankSum=7.291;DP=444;FS=4.369;HRun=11;HaplotypeScore=43.7202;InbreedingCoeff=0.5571;MQ=50.22;MQ0=29;MQRankSum=3.011;QD=9.90;ReadPosRankSum=2.950;VQSLOD=2.2453;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,32:36:86.80:705,87,0	0/1:5,0:5:9.31:9,0,113	./.	./.	0/0:15,0:14:33.38:0,33,322	0/0:20,0:18:42.06:0,42,432	0/0:23,0:22:45.06:0,45,467	0/1:27,2:23:4.17:4,0,370	1/1:3,12:15:35.95:295,36,0	0/0:14,0:10:24.06:0,24,256	0/0:6,0:5:12.03:0,12,128	0/1:5,12:17:2.02:170,0,2	1/1:2,8:9:14.98:123,15,0	0/1:9,1:10:9.65:10,0,101	0/0:17,0:17:42.07:0,42,435	0/0:13,0:12:30.08:0,30,320	0/0:24,1:25:32.35:0,32,533	0/0:19,0:19:42.58:0,43,447	0/0:12,1:12:8.37:0,8,280	0/1:5,1:6:12.17:12,0,71	0/0:15,0:15:33.07:0,33,344	1/1:1,7:8:17.98:148,18,0	1/1:2,5:7:14.98:123,15,0	1/1:4,26:30:37.22:510,37,0	0/0:13,1:11:5.42:0,5,248	0/1:18,2:19:1.45:1,0,344	0/0:23,1:24:29.46:0,29,506	0/0:8,0:6:15.04:0,15,160
chr10	76262975	.	ATG	A	505.97	PASS	AC=14;AF=1.000;AN=14;DP=149;FS=0.000;HRun=0;HaplotypeScore=10.8069;MQ=18.46;MQ0=22;QD=10.54;VQSLOD=2.8153;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	1/1:3,2:2:0.47:1,0,0	./.	1/1:0,4:2:6.02:82,6,0	1/1:2,10:2:3.01:41,3,0	./.	1/1:0,7:6:15.05:205,15,0	1/1:7,5:7:9.03:123,9,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,2:2:3.01:41,3,0	./.	1/1:0,5:4:5.83:82,6,0	./.	./.	./.	./.
chr10	76262990	.	TA	T	114.01	PASS	AB=0.750;AC=12;AF=0.462;AN=26;BaseQRankSum=2.934;DP=214;FS=0.000;HRun=1;HaplotypeScore=18.1579;InbreedingCoeff=0.5313;MQ=18.89;MQ0=72;MQRankSum=-1.615;QD=3.56;ReadPosRankSum=2.736;VQSLOD=-0.0417;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:5:2.04:0,2,6	./.	./.	./.	./.	./.	1/1:6,0:3:0.47:1,0,0	./.	1/1:0,3:2:5.93:40,6,0	0/0:15,0:4:12.04:0,12,185	./.	1/1:0,5:5:11.87:80,12,0	1/1:0,3:3:5.98:56,6,0	./.	0/0:16,0:7:6.02:0,6,96	0/0:14,0:5:9.03:0,9,134	./.	./.	./.	0/0:12,0:5:3.01:0,3,48	./.	0/1:0,2:2:0:0,0,0	./.	1/1:0,4:4:5.93:40,6,0	./.	0/0:12,0:1:3.01:0,3,46	0/1:9,0:3:0:0,0,0	./.
chr10	76264989	.	A	AG	1246.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.520;DP=586;FS=0.000;HRun=7;HaplotypeScore=57.3509;InbreedingCoeff=0.9137;MQ=88.34;MQ0=0;MQRankSum=-2.966;QD=31.15;ReadPosRankSum=-0.301;VQSLOD=3.5634;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,39:40:99:1341,111,0	0/0:6,0:6:12.02:0,12,116	0/0:23,0:23:54.02:0,54,507	0/0:20,0:20:59.69:0,60,559	0/0:22,0:22:63.10:0,63,608	0/0:25,0:25:66.09:0,66,632	0/0:28,0:28:75.09:0,75,718	0/0:37,0:37:96.14:0,96,922	0/0:22,0:22:60.08:0,60,574	0/0:24,0:24:60.07:0,60,574	0/0:8,0:8:24.02:0,24,225	0/0:24,0:24:63.09:0,63,608	0/0:15,0:15:45.07:0,45,434	0/0:11,0:11:33.04:0,33,313	0/0:26,0:26:72.09:0,72,688	0/0:25,0:25:69.11:0,69,666	0/0:26,0:26:72.11:0,72,695	0/0:21,0:21:51.03:0,51,482	0/0:20,0:20:48.07:0,48,463	0/0:11,0:11:30.04:0,30,290	0/0:33,0:33:87.05:0,87,822	0/0:16,0:16:45.06:0,45,431	0/0:19,0:19:45.01:0,45,422	0/0:28,0:28:75.11:0,75,724	0/0:8,0:8:9.01:0,9,87	0/0:20,0:20:54.08:0,54,518	0/0:16,0:16:45.06:0,45,430	0/0:12,0:12:23.33:0,23,281
chr10	76266178	.	GT	G	8021.86	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.624;DP=747;FS=3.874;HRun=2;HaplotypeScore=69.3050;InbreedingCoeff=1.0000;MQ=81.62;MQ0=0;MQRankSum=-1.127;QD=36.46;ReadPosRankSum=2.925;VQSLOD=5.6449;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,42:43:99:1558,120,0	0/0:16,0:16:48.16:0,48,715	0/0:22,0:22:63.19:0,63,890	0/0:17,0:17:48.16:0,48,698	0/0:26,0:26:75.24:0,75,1104	0/0:28,0:28:78.26:0,78,1165	0/0:30,0:30:90.30:0,90,1349	0/0:30,0:30:84.28:0,84,1240	1/1:0,33:33:96.31:1246,96,0	0/0:23,0:23:66.21:0,66,939	0/0:18,0:18:54.13:0,54,765	1/1:2,34:36:93.30:1207,93,0	1/1:0,23:23:63.15:817,63,0	0/0:22,0:22:66.22:0,66,982	0/0:31,0:31:93.30:0,93,1373	0/0:29,0:29:87.29:0,87,1285	0/0:35,0:35:99:0,105,1528	0/0:24,0:24:72.24:0,72,1079	0/0:23,0:23:69.19:0,69,971	0/0:26,0:26:78.25:0,78,1148	0/0:39,0:39:99:0,117,1751	1/1:0,24:24:66.21:856,66,0	1/1:0,21:21:63.20:818,63,0	1/1:0,40:40:99:1519,117,0	0/0:20,0:20:57.19:0,57,854	0/0:30,0:30:87.29:0,87,1302	0/0:20,0:20:57.18:0,57,813	0/0:18,0:18:51.14:0,51,723
chr10	76266725	.	TTA	T	508.67	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=3.000;DP=392;FS=0.566;HRun=0;HaplotypeScore=48.4579;InbreedingCoeff=0.1771;MQ=74.77;MQ0=11;MQRankSum=-1.667;QD=6.87;ReadPosRankSum=-1.970;VQSLOD=2.2217;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,4:34:29.09:586,29,0	0/0:3,0:3:8.96:0,9,104	0/0:43,0:15:32.32:0,32,207	0/0:26,0:6:2.55:0,3,39	0/1:14,0:14:12.17:12,0,239	0/0:9,0:9:23.97:0,24,276	0/0:14,0:14:38.96:0,39,432	0/0:39,0:39:61.96:0,62,1046	0/1:12,0:12:17.78:18,0,112	0/0:7,0:7:17.97:0,18,178	0/0:11,0:11:29.55:0,30,240	0/1:5,0:5:1.99:2,0,63	0/0:9,0:9:16.60:0,17,176	0/0:13,0:13:7.20:0,7,362	0/0:10,0:10:26.90:0,27,254	0/0:10,0:10:18.74:0,19,239	0/0:20,0:20:53.98:0,54,624	0/0:8,0:8:9.14:0,9,254	0/0:18,0:17:22.06:0,22,403	0/0:13,0:13:23.76:0,24,403	0/0:7,0:7:14.96:0,15,121	0/0:4,0:3:1.91:0,2,25	0/0:9,0:9:7.19:0,7,151	0/0:10,0:10:4.09:0,4,130	0/1:9,0:9:8.44:8,0,142	0/0:15,0:15:38.08:0,38,444	0/0:6,0:6:16.48:0,16,117	0/0:14,0:14:41.43:0,41,285
chr10	76270534	.	G	GA	666.37	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.496;DP=646;FS=0.682;HRun=9;HaplotypeScore=67.3220;InbreedingCoeff=0.9738;MQ=75.30;MQ0=1;MQRankSum=-0.317;QD=22.21;ReadPosRankSum=-0.626;VQSLOD=4.0979;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:30:69.19:761,69,0	0/0:10,0:10:26.99:0,27,234	0/0:22,0:18:39.32:0,39,386	0/0:26,0:25:29.25:0,29,238	0/0:17,0:17:15.30:0,15,330	0/0:24,0:24:59.97:0,60,517	0/0:26,0:26:68.89:0,69,585	0/0:35,1:36:52.77:0,53,669	0/0:19,0:20:53:0,53,445	0/0:21,0:21:17.79:0,18,377	0/0:10,0:10:29.99:0,30,259	0/0:32,0:32:86.92:0,87,747	0/0:16,0:16:41.96:0,42,359	0/0:21,0:21:56.99:0,57,495	0/0:35,1:36:49.74:0,50,636	0/0:24,0:24:26.91:0,27,498	0/0:25,0:25:68.90:0,69,586	0/0:21,0:21:59.98:0,60,521	0/0:16,0:16:38.98:0,39,335	0/0:23,0:23:56.97:0,57,495	0/0:25,0:25:68.98:0,69,599	0/0:27,0:27:65.98:0,66,573	0/0:20,0:20:47.97:0,48,415	0/0:23,0:23:65.98:0,66,573	0/0:14,0:14:38.97:0,39,334	0/0:26,0:26:71.84:0,72,604	0/0:32,1:34:58.76:0,59,707	0/0:21,0:21:62.99:0,63,547
chr10	76270935	.	GA	G	653.55	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=7.051;DP=392;FS=0.847;HRun=2;HaplotypeScore=41.6875;InbreedingCoeff=0.9295;MQ=70.61;MQ0=0;MQRankSum=-0.807;QD=27.23;ReadPosRankSum=1.330;VQSLOD=3.2295;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:60.15:748,60,0	0/0:4,0:4:12.03:0,12,156	0/0:6,0:6:11.22:0,11,191	0/0:14,0:14:36:0,36,413	0/0:8,0:8:23.75:0,24,310	0/0:20,0:20:57.16:0,57,765	0/0:16,0:16:48.07:0,48,612	0/0:16,0:16:42.11:0,42,542	0/0:9,0:9:27.06:0,27,367	0/0:11,0:11:33.09:0,33,441	0/0:12,0:12:36.05:0,36,458	0/0:14,0:14:42.14:0,42,603	0/0:11,0:11:33:0,33,446	0/0:10,0:10:30.07:0,30,402	0/0:19,0:19:57.12:0,57,744	0/0:9,0:9:27.04:0,27,302	0/0:35,0:35:99:0,105,1426	0/0:27,0:27:81.03:0,81,1066	0/0:14,0:14:35.97:0,36,421	0/0:10,0:10:30.10:0,30,431	0/0:26,0:26:69.23:0,69,984	0/0:11,0:11:30.10:0,30,430	0/0:13,0:13:36.08:0,36,477	0/0:12,0:12:30.08:0,30,412	0/0:9,0:9:27.05:0,27,335	0/0:16,0:16:48.13:0,48,659	0/0:16,0:16:45.02:0,45,613	./.
chr10	76272670	.	C	CT	13597.38	PASS	AB=0.938;AC=54;AF=0.964;AN=56;BaseQRankSum=-3.010;DP=360;FS=2.395;HRun=0;HaplotypeScore=110.7215;InbreedingCoeff=-0.0317;MQ=55.52;MQ0=0;MQRankSum=-1.924;QD=37.77;ReadPosRankSum=1.342;VQSLOD=4.5608;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:48.16:719,48,0	1/1:0,3:3:9.03:134,9,0	0/1:6,1:6:0.51:97,0,1	0/1:12,0:8:21.09:73,0,21	1/1:0,18:18:42.14:628,42,0	1/1:0,14:14:39.13:578,39,0	1/1:2,16:18:51.12:714,51,0	1/1:1,25:26:78.23:1118,78,0	1/1:0,7:7:21.07:311,21,0	1/1:0,12:12:30.10:453,30,0	1/1:0,8:8:21.07:310,21,0	1/1:1,16:17:45.15:668,45,0	1/1:1,12:13:36.09:513,36,0	1/1:0,17:17:51.17:758,51,0	1/1:0,13:13:36.12:536,36,0	1/1:1,16:17:51.16:740,51,0	1/1:0,15:15:39.13:585,39,0	1/1:1,9:10:22.36:356,22,0	1/1:0,6:6:18.05:250,18,0	1/1:0,17:17:45.15:672,45,0	1/1:0,17:17:32.45:492,32,0	1/1:0,12:12:30.10:444,30,0	1/1:0,8:8:24.08:357,24,0	1/1:0,9:9:15.05:223,15,0	1/1:1,11:12:33.11:489,33,0	1/1:0,16:16:48.16:717,48,0	1/1:0,8:8:24.08:351,24,0	1/1:0,9:9:21.07:313,21,0
chr10	76272676	.	GTT	G	9883.19	PASS	AB=0.850;AC=54;AF=0.964;AN=56;BaseQRankSum=-2.876;DP=329;FS=3.634;HRun=5;HaplotypeScore=121.5200;InbreedingCoeff=-0.0403;MQ=52.83;MQ0=0;MQRankSum=-3.903;QD=30.04;ReadPosRankSum=2.569;VQSLOD=3.8036;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,12:18:42.08:542,42,0	1/1:0,3:3:9.03:125,9,0	0/1:8,2:9:70.32:70,0,100	0/1:11,2:8:20.47:20,0,71	1/1:1,15:16:11.89:141,12,0	1/1:2,13:15:39.09:518,39,0	1/1:2,15:17:42.11:544,42,0	1/1:3,17:20:54.13:711,54,0	1/1:1,6:7:18.05:237,18,0	1/1:2,8:10:21.07:288,21,0	1/1:3,5:8:15.03:183,15,0	1/1:1,14:15:42.14:577,42,0	1/1:1,13:14:33.10:434,33,0	1/1:2,14:16:42.14:576,42,0	1/1:1,11:12:36.12:496,36,0	1/1:2,15:17:48.09:621,48,0	1/1:2,10:12:36.12:496,36,0	1/1:3,5:8:18.06:251,18,0	1/1:0,2:2:6.02:83,6,0	1/1:1,11:12:29.91:385,30,0	1/1:2,11:13:15.46:188,15,0	1/1:3,7:10:24.06:304,24,0	1/1:0,8:8:18.06:231,18,0	1/1:2,7:9:18.06:244,18,0	1/1:1,11:12:30.10:415,30,0	1/1:2,11:13:36.12:498,36,0	1/1:4,8:12:36.12:495,36,0	1/1:3,4:7:15.05:208,15,0
chr10	76273050	.	C	CTGTG	487.85	PASS	AB=0.908;AC=14;AF=0.280;AN=50;BaseQRankSum=-1.029;DP=681;FS=0.000;HRun=0;HaplotypeScore=116.1682;InbreedingCoeff=0.4353;MQ=62.65;MQ0=25;MQRankSum=-1.941;QD=2.00;ReadPosRankSum=-1.090;VQSLOD=2.1338;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:30:6.05:0,6,159	./.	./.	0/1:57,0:25:0:0,0,0	0/0:20,0:20:17.98:0,18,205	0/0:20,0:19:18:0,18,192	0/0:24,0:28:11.69:0,12,143	1/1:33,0:32:5.16:26,5,0	0/1:16,4:19:8.16:64,0,8	0/0:16,0:21:11.07:0,11,102	0/0:7,0:7:3.01:0,3,46	0/1:18,3:23:33.44:198,0,33	1/1:20,0:20:5.93:41,6,0	0/0:10,0:10:6:0,6,69	0/0:26,0:26:30.96:0,31,287	0/0:30,0:30:32.08:0,32,332	0/0:41,0:40:30.16:0,30,417	0/0:24,0:24:23.95:0,24,233	1/1:25,0:24:1.51:4,2,0	0/0:11,0:10:3:0,3,28	0/0:44,0:44:18.51:0,19,236	0/0:20,0:20:15.46:0,15,173	1/1:7,0:11:6.23:78,6,0	1/1:16,14:32:9.03:210,9,0	0/0:11,0:11:7.57:0,8,78	0/1:21,0:21:9.77:10,0,78	0/0:16,0:21:9.01:0,9,98	./.
chr10	76273552	.	CAG	C	119.73	PASS	AB=0.956;AC=11;AF=0.196;AN=56;BaseQRankSum=4.769;DP=636;FS=14.091;HRun=0;HaplotypeScore=93.2378;InbreedingCoeff=-0.0175;MQ=55.35;MQ0=58;MQRankSum=-0.868;QD=0.47;ReadPosRankSum=-0.617;VQSLOD=0.2541;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,12:26:11.87:127,12,0	0/0:6,0:6:9.50:0,10,143	0/0:30,0:13:4.60:0,5,121	0/1:50,0:13:9.05:9,0,117	0/0:15,0:10:15.03:0,15,205	0/0:20,1:19:2.95:0,3,523	0/0:16,0:17:28.34:0,28,421	0/1:43,3:42:29.10:29,0,865	0/0:24,0:19:36.07:0,36,555	0/0:19,0:15:39.10:0,39,552	0/0:17,0:16:24.08:0,24,380	0/0:24,1:23:9.05:0,9,620	0/1:9,1:9:18.11:18,0,223	0/0:16,0:16:26.93:0,27,409	0/1:21,1:20:6.08:6,0,371	0/0:25,0:24:26.23:0,26,813	0/0:22,0:17:37.33:0,37,534	0/1:19,1:18:3.10:3,0,495	0/0:25,1:21:8.17:0,8,451	0/1:21,0:16:3.05:3,0,432	0/0:33,1:28:20.93:0,21,766	0/1:22,1:21:3.07:3,0,449	0/0:15,0:13:30.09:0,30,458	0/0:26,0:20:30.09:0,30,455	0/0:10,0:9:11.70:0,12,156	0/0:30,1:27:17.90:0,18,642	0/1:18,2:19:41.86:42,0,325	0/1:12,0:10:14.66:15,0,242
chr10	76273908	.	CGAGAGAGA	C	268.77	PASS	AC=10;AF=0.200;AN=50;BaseQRankSum=2.341;DP=478;FS=10.205;HRun=0;HaplotypeScore=108.4494;InbreedingCoeff=0.5302;MQ=65.94;MQ0=15;MQRankSum=-0.888;QD=3.73;ReadPosRankSum=1.937;VQSLOD=1.3807;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:0.26:0,0,1	0/0:6,0:6:9.02:0,9,120	./.	./.	0/0:18,0:18:12.03:0,12,158	0/0:18,0:17:6.02:0,6,118	0/0:14,0:14:3.90:0,4,50	0/0:24,0:24:0.47:0,0,1	1/1:13,0:13:3.01:74,3,0	0/0:16,0:15:8.24:0,8,138	0/0:12,0:12:3.01:0,3,48	1/1:14,0:14:3.01:56,3,0	1/1:10,2:12:3.01:74,3,0	0/0:13,0:13:12.01:0,12,285	0/0:20,0:18:15.03:0,15,196	0/0:18,0:18:12.04:0,12,331	0/0:21,0:20:12.02:0,12,279	0/0:19,0:16:19.43:0,19,367	0/0:13,0:13:6.01:0,6,65	0/0:21,0:21:3:0,3,25	0/0:23,0:23:15.04:0,15,304	0/0:19,4:23:0:0,0,0	1/1:13,0:15:6:96,6,0	1/1:13,0:16:6.02:96,6,0	./.	0/0:17,0:17:15.05:0,15,446	0/0:17,0:17:12.51:0,13,311	0/0:17,0:17:3.87:0,4,25
chr10	76274590	.	GC	G	662.81	PASS	AB=0.776;AC=12;AF=0.214;AN=56;BaseQRankSum=2.546;DP=400;FS=11.727;HRun=10;HaplotypeScore=57.1987;InbreedingCoeff=0.3429;MQ=75.01;MQ0=3;MQRankSum=1.700;QD=4.67;ReadPosRankSum=0.419;VQSLOD=0.1730;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:20.90:0,21,167	0/0:5,0:5:11.77:0,12,111	0/1:30,1:16:9.87:10,0,115	0/1:21,0:17:12.94:13,0,100	0/1:11,1:14:6.21:6,0,279	0/0:11,0:11:14.82:0,15,138	0/0:18,1:19:22.03:0,22,397	0/0:24,0:25:27.05:0,27,288	0/1:4,11:15:14.56:112,0,15	0/0:15,0:15:27.49:0,27,267	0/0:11,0:11:17.36:0,17,164	1/1:2,14:16:26.99:234,27,0	1/1:2,8:10:10.96:120,11,0	0/0:16,0:16:27.73:0,28,252	0/0:15,0:15:27.04:0,27,278	0/0:10,0:11:27.05:0,27,281	0/0:15,0:15:13.03:0,13,338	0/0:10,0:10:27.05:0,27,283	0/0:19,1:20:3.99:0,4,226	0/0:13,0:13:11.90:0,12,114	0/0:14,0:15:24.90:0,25,235	0/1:3,6:9:10.70:66,0,11	0/1:5,8:13:12.21:126,0,12	1/1:9,2:11:13.48:136,13,0	0/0:4,0:4:6.02:0,6,66	0/0:13,0:13:29.92:0,30,273	0/0:17,0:17:26.97:0,27,249	0/0:4,0:8:17.93:0,18,168
chr10	76275298	.	G	GCA	2537.22	PASS	AB=0.932;AC=16;AF=0.286;AN=56;BaseQRankSum=4.756;DP=611;FS=0.000;HRun=0;HaplotypeScore=107.4103;InbreedingCoeff=0.5607;MQ=66.77;MQ0=3;MQRankSum=-0.503;QD=12.94;ReadPosRankSum=0.070;VQSLOD=3.3634;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:49.67:0,50,333	0/0:4,0:6:11.83:0,12,119	0/0:30,0:22:5.75:0,6,41	0/0:30,0:24:5.38:0,5,40	0/1:15,1:17:8.49:8,0,272	0/0:16,0:22:17.66:0,18,297	0/0:29,0:30:11.94:0,12,461	0/0:22,0:22:38.13:0,38,356	1/1:5,7:12:9.16:290,9,0	0/1:15,1:17:5.36:5,0,328	0/1:16,1:17:20.10:20,0,244	1/1:12,10:21:5.16:392,5,0	1/1:14,4:18:8.36:391,8,0	0/0:27,0:28:62.79:0,63,622	0/1:13,2:16:58.69:59,0,230	0/0:19,0:20:29.01:0,29,539	0/0:27,0:27:53.70:0,54,535	0/0:26,0:27:47.14:0,47,582	0/0:8,0:8:12.03:0,12,131	0/0:11,0:13:20.61:0,21,174	0/0:54,1:59:83.79:0,84,1249	1/1:8,5:13:18.05:258,18,0	1/1:11,6:17:26.98:324,27,0	1/1:25,20:46:35.53:970,36,0	0/0:12,0:13:4.68:0,5,243	0/0:18,0:18:37.82:0,38,370	0/0:14,0:14:23.59:0,24,238	0/0:13,0:13:23.97:0,24,251
chr10	76275320	.	ACG	A	361.71	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=4.545;DP=665;FS=1.997;HRun=0;HaplotypeScore=118.7396;InbreedingCoeff=0.1671;MQ=54.97;MQ0=11;MQRankSum=-0.206;QD=2.70;ReadPosRankSum=0.399;VQSLOD=1.9892;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,12:26:33.09:420,33,0	0/1:12,0:11:0.90:1,0,193	0/0:25,0:6:9.43:0,9,82	0/0:32,0:7:0:0,0,0	0/0:21,0:21:24.57:0,25,433	0/1:19,0:19:9.09:9,0,379	0/0:37,0:37:42.31:0,42,929	0/0:21,0:21:32.66:0,33,571	0/1:12,0:12:3.02:3,0,55	0/0:20,0:20:24.50:0,25,446	0/0:17,0:17:27.07:0,27,420	0/1:27,0:26:16.20:16,0,79	0/1:19,0:18:22.59:23,0,58	0/0:30,0:30:42.24:0,42,858	0/0:16,0:15:16.36:0,16,444	0/0:23,0:23:41.42:0,41,816	0/0:28,0:28:74.79:0,75,943	0/0:33,0:33:27.57:0,28,836	0/0:13,0:13:27.55:0,28,271	0/0:15,0:15:8.24:0,8,281	0/0:81,0:81:99:0,153,2310	0/0:13,0:13:5.84:0,6,25	0/1:18,0:18:15.97:16,0,18	0/0:38,0:38:1.25:0,1,96	0/0:18,0:18:27.81:0,28,434	0/0:21,0:21:44.57:0,45,569	0/0:16,0:15:35.70:0,36,426	0/0:13,0:12:32.94:0,33,428
chr10	76275328	.	GCT	G	85.08	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=4.662;DP=647;FS=41.671;HRun=0;HaplotypeScore=115.6283;InbreedingCoeff=0.4682;MQ=53.89;MQ0=12;MQRankSum=-0.079;QD=1.98;ReadPosRankSum=-1.429;VQSLOD=0.6029;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,1:26:28.15:176,28,0	0/1:16,0:14:10.33:10,0,287	0/0:28,0:5:9.88:0,10,111	0/0:27,0:2:5.75:0,6,32	0/0:19,0:19:19.78:0,20,540	0/0:21,0:20:26.57:0,27,469	0/0:35,0:35:64.66:0,65,1323	0/0:21,0:21:32.54:0,33,759	0/0:11,0:11:21.89:0,22,229	0/0:16,0:16:47.32:0,47,671	0/0:15,0:15:27.09:0,27,501	0/0:26,0:25:10.63:0,11,272	0/0:17,1:17:0.04:0,0,220	0/0:26,0:26:49.77:0,50,1077	0/0:15,0:14:40.31:0,40,599	0/0:21,0:21:59.66:0,60,1003	0/0:31,0:30:81.15:0,81,1239	0/0:34,1:35:77.16:0,77,1230	0/0:13,2:15:18.23:0,18,478	0/0:13,0:13:32.76:0,33,435	0/0:85,0:85:99:0,183,3157	0/0:10,0:10:10.58:0,11,115	0/0:12,1:13:14.50:0,14,117	0/0:38,1:39:56.88:0,57,623	0/0:19,0:19:38.63:0,39,552	0/0:20,0:20:49.91:0,50,735	0/0:13,0:12:34.61:0,35,504	0/0:12,0:11:25.32:0,25,432
chr10	76275364	.	ACACACACACGCATG	A	173.35	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=2.667;DP=630;FS=19.234;HRun=0;HaplotypeScore=209.9313;InbreedingCoeff=0.1541;MQ=51.25;MQ0=18;MQRankSum=-1.215;QD=1.88;ReadPosRankSum=-2.034;VQSLOD=1.1304;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,18:30:2.99:23,3,0	0/0:14,0:12:29.75:0,30,936	0/0:13,0:1:3:0,3,27	0/0:16,0:2:3.01:0,3,65	0/0:21,0:21:36.02:0,36,1406	0/1:27,0:26:6.71:7,0,1521	0/0:35,0:35:84.21:0,84,2309	0/0:23,0:22:62.68:0,63,1157	0/0:13,0:13:5.98:0,6,91	0/0:15,0:15:42.13:0,42,1041	0/0:10,0:10:15.05:0,15,624	0/0:21,0:20:12.30:0,12,389	0/1:21,0:20:61.72:62,0,219	0/0:20,0:20:48.15:0,48,1910	0/0:16,0:15:42.11:0,42,1520	0/0:19,0:19:48.14:0,48,1619	0/0:29,0:27:71.48:0,71,3494	0/0:36,0:35:89.45:0,89,3508	0/0:16,0:15:37.66:0,38,1250	0/0:12,0:12:30.10:0,30,1326	0/0:98,0:98:99:0,238,8777	0/0:10,0:10:8.42:0,8,174	0/1:12,0:12:99:188,0,112	0/0:36,0:34:37.04:0,37,809	0/0:18,0:18:34.52:0,35,1755	0/0:23,0:21:55.43:0,55,2499	0/0:16,0:15:45.12:0,45,1882	0/0:8,0:7:21.05:0,21,719
chr10	76275368	.	ACACACGCATG	A	552.30	PASS	AB=0.933;AC=9;AF=0.173;AN=52;BaseQRankSum=4.923;DP=615;FS=23.406;HRun=0;HaplotypeScore=166.1099;InbreedingCoeff=-0.2212;MQ=51.51;MQ0=17;MQRankSum=-1.105;QD=3.29;ReadPosRankSum=-0.762;VQSLOD=1.1886;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/1:14,0:12:10.11:10,0,492	0/0:12,0:1:3:0,3,27	./.	0/0:20,0:20:29.86:0,30,994	0/0:26,0:25:27.14:0,27,1195	0/1:33,0:33:61.34:61,0,1360	0/0:24,0:23:16.62:0,17,896	0/1:13,0:13:18.12:26,0,18	0/0:15,0:15:39.04:0,39,760	0/0:12,0:12:21.07:0,21,641	0/1:13,7:19:99:133,0,109	0/1:10,11:20:76.83:187,0,77	0/0:16,0:16:39.09:0,39,1228	0/0:17,0:16:39.10:0,39,1098	0/0:19,0:19:42.09:0,42,989	0/0:29,0:27:30.31:0,30,2446	0/1:35,0:35:59.40:59,0,2257	0/0:18,0:17:0.18:0,0,816	0/1:13,0:13:0.27:0,0,952	0/0:99,0:99:99:0,220,6163	0/0:10,0:10:3.65:0,4,48	0/1:11,0:11:33.37:191,0,33	0/0:23,12:33:16.55:0,17,325	0/0:18,0:18:35.58:0,36,1355	0/0:22,0:20:51.62:0,52,1762	0/0:15,0:14:41.63:0,42,1313	0/1:8,0:7:12.50:13,0,380
chr10	76275370	.	ACACGCATG	A	705.45	PASS	AB=0.643;AC=11;AF=0.212;AN=52;BaseQRankSum=3.403;DP=596;FS=13.933;HRun=0;HaplotypeScore=143.2922;InbreedingCoeff=0.7968;MQ=51.73;MQ0=17;MQRankSum=-1.328;QD=6.72;ReadPosRankSum=0.145;VQSLOD=1.9771;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:13,0:11:15.05:0,15,441	0/0:12,0:1:3:0,3,27	./.	0/0:20,0:20:23.98:0,24,685	0/0:27,0:26:39.13:0,39,1089	0/0:31,0:31:39.61:0,40,1080	0/0:23,0:22:33.10:0,33,685	1/1:3,10:13:3.01:77,3,0	0/0:13,0:13:27.09:0,27,658	0/0:11,0:11:21.07:0,21,555	1/1:15,4:19:15.05:311,15,0	1/1:19,1:19:9.03:172,9,0	0/0:17,0:17:30.10:0,30,918	0/0:15,0:14:27.09:0,27,816	0/0:17,0:17:21.07:0,21,612	0/0:31,0:29:57.20:0,57,1986	0/0:33,0:33:54.19:0,54,1767	0/0:18,0:17:21.06:0,21,616	0/0:13,0:13:24.07:0,24,713	0/0:96,0:96:99:0,153,4610	0/1:4,5:9:0.01:0,0,0	1/1:10,0:10:11.92:248,12,0	1/1:33,1:32:2.99:43,3,0	0/0:18,0:18:35.64:0,36,1146	0/0:24,0:22:48.16:0,48,1561	0/0:15,0:14:36.10:0,36,1043	0/0:8,0:7:9.01:0,9,270
chr10	76278070	.	TC	T	5021.73	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.119;DP=752;FS=0.719;HRun=3;HaplotypeScore=69.1355;InbreedingCoeff=0.9996;MQ=78.54;MQ0=0;MQRankSum=-0.146;QD=32.40;ReadPosRankSum=4.077;VQSLOD=5.1956;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,1904	0/0:17,0:17:48.15:0,48,673	0/0:20,0:20:54.18:0,54,761	0/0:26,0:26:75.18:0,75,993	0/0:30,0:30:75.25:0,75,1072	0/0:22,0:22:66.22:0,66,950	0/0:32,0:32:93.30:0,93,1320	0/0:30,0:30:78.20:0,78,1053	1/1:0,20:20:51.16:632,51,0	0/0:25,0:25:72.11:0,72,960	0/0:24,0:24:72.23:0,72,1014	1/1:0,34:34:81.25:1004,81,0	1/1:0,27:27:78.25:967,78,0	0/0:31,0:31:87.23:0,87,1193	0/0:36,0:36:99:0,108,1515	0/0:31,0:31:90.26:0,90,1241	0/0:26,0:26:78.26:0,78,1122	0/0:23,0:23:69.20:0,69,954	0/0:25,0:25:75.23:0,75,1047	0/0:19,0:19:57.18:0,57,803	0/0:43,0:43:99:0,126,1794	1/1:0,26:26:66.21:818,66,0	1/1:0,13:13:37.36:448,37,0	1/1:0,35:35:93.29:1153,93,0	0/0:20,0:20:60.19:0,60,847	0/0:35,0:35:99:0,99,1409	0/0:27,0:26:75.25:0,75,1076	0/0:8,0:8:24.08:0,24,346
chr10	76279246	.	C	CGTTT	6795.01	PASS	AB=0.971;AC=13;AF=0.232;AN=56;BaseQRankSum=-12.941;DP=699;FS=0.424;HRun=0;HaplotypeScore=109.2826;InbreedingCoeff=0.8898;MQ=68.71;MQ0=1;MQRankSum=0.887;QD=32.83;ReadPosRankSum=-1.062;VQSLOD=4.3889;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:35:42.01:0,42,380	0/0:10,0:11:30.08:0,30,439	0/0:26,0:21:17.29:0,17,232	0/0:17,0:16:15.01:0,15,195	0/0:23,0:23:48.16:0,48,757	0/0:25,0:25:63.18:0,63,966	0/0:23,0:23:51.16:0,51,785	0/0:24,0:24:24.02:0,24,312	1/1:5,28:33:66.23:1591,66,0	0/0:42,0:42:92.82:0,93,1359	0/0:14,0:14:18.03:0,18,242	1/1:9,22:32:50.91:1227,51,0	1/1:6,18:24:36.12:867,36,0	0/0:21,0:21:57.13:0,57,819	0/0:33,0:34:72.22:0,72,1095	0/1:33,1:34:6.16:6,0,874	0/0:31,0:31:66.14:0,66,983	0/0:16,0:16:24.08:0,24,370	0/0:14,0:13:18.05:0,18,268	0/0:15,0:15:21.02:0,21,309	0/0:35,0:35:60.10:0,60,908	1/1:8,26:34:66.22:1517,66,0	1/1:6,10:18:24.08:575,24,0	1/1:7,23:31:41.18:1011,41,0	0/0:22,0:22:36.11:0,36,556	0/0:28,0:28:63.19:0,63,946	0/0:26,0:26:54.18:0,54,866	0/0:10,0:10:6.02:0,6,97
chr10	76279423	.	CATGT	C	2910.34	PASS	AB=0.855;AC=15;AF=0.278;AN=54;BaseQRankSum=11.217;DP=718;FS=0.000;HRun=0;HaplotypeScore=119.0169;InbreedingCoeff=0.6821;MQ=66.05;MQ0=11;MQRankSum=0.471;QD=13.17;ReadPosRankSum=2.492;VQSLOD=3.3075;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:45.15:0,45,1021	0/0:13,0:13:12.01:0,12,234	./.	0/0:17,0:10:0.14:0,0,1	0/1:27,2:28:45.26:45,0,919	0/0:25,0:25:51.18:0,51,1175	0/0:22,0:22:27.09:0,27,636	0/0:34,0:32:10.27:0,10,161	1/1:19,12:31:24.08:374,24,0	0/0:32,0:32:54.19:0,54,1258	0/0:17,0:17:24.08:0,24,566	1/1:8,15:23:36.12:561,36,0	1/1:9,12:21:27.09:420,27,0	0/0:26,0:26:60.19:0,60,1343	0/0:29,0:29:36.12:0,36,847	0/0:30,0:30:45.15:0,45,1017	0/1:12,12:24:34.61:478,0,35	0/0:22,0:20:27.09:0,27,603	0/0:20,0:18:27.09:0,27,636	0/1:26,1:27:4.57:5,0,844	0/0:51,2:53:28.54:0,29,1626	1/1:14,9:24:21.07:326,21,0	1/1:7,11:18:20.88:327,21,0	1/1:13,11:24:36.11:561,36,0	0/0:29,0:29:60.19:0,60,1369	0/0:33,0:33:57.20:0,57,1343	0/0:20,0:20:36.12:0,36,846	0/0:5,0:5:3.01:0,3,71
chr10	76279806	.	AGT	A	3424.58	PASS	AB=0.919;AC=14;AF=0.250;AN=56;BaseQRankSum=9.225;DP=1115;FS=0.811;HRun=0;HaplotypeScore=159.7828;InbreedingCoeff=0.8055;MQ=50.38;MQ0=43;MQRankSum=2.229;QD=15.57;ReadPosRankSum=2.483;VQSLOD=3.6577;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:64.10:0,64,1022	0/0:5,0:5:12.04:0,12,186	0/0:105,0:18:31.17:0,31,427	0/0:101,0:13:8.38:0,8,61	0/0:25,0:25:54.11:0,54,785	0/0:17,0:16:30.09:0,30,462	0/0:51,0:51:98.49:0,98,1507	0/0:68,0:52:21.44:0,21,665	1/1:9,18:26:57.14:696,57,0	0/0:33,0:31:75.10:0,75,1106	0/1:11,1:12:6.58:7,0,370	1/1:17,12:26:39.04:459,39,0	1/1:10,17:27:39.86:509,40,0	0/0:40,1:40:38.51:0,39,1066	0/0:30,1:30:25.80:0,26,834	0/1:29,2:32:5.45:5,0,826	0/0:47,1:48:79.18:0,79,1702	0/0:27,0:26:54.06:0,54,810	0/0:30,2:22:5.01:0,5,587	0/0:24,0:23:57.17:0,57,863	0/0:176,1:164:99:0,273,4910	1/1:13,9:22:33.05:374,33,0	1/1:7,9:16:27.08:330,27,0	1/1:18,35:43:87.10:1044,87,0	0/0:17,0:16:35.48:0,35,527	0/0:35,0:35:81.25:0,81,1250	0/0:12,0:12:30.10:0,30,475	0/0:11,0:10:21.07:0,21,331
chr10	76279929	.	TGTGTGTGTGTG	T	2903.67	PASS	AB=0.791;AC=9;AF=0.173;AN=52;BaseQRankSum=8.058;DP=1522;FS=3.212;HRun=0;HaplotypeScore=382.1517;InbreedingCoeff=0.3086;MQ=39.25;MQ0=182;MQRankSum=-8.539;QD=8.23;ReadPosRankSum=-1.653;VQSLOD=1.1474;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:43,20:45:25.48:137,0,25	0/0:13,0:9:24.07:0,24,762	./.	./.	0/0:43,0:32:51.15:0,51,1738	0/0:36,0:33:55.04:0,55,1960	0/0:79,0:67:93.87:0,94,2675	0/0:141,0:63:56.67:0,57,1291	0/1:44,10:41:84.63:1291,0,85	0/0:97,0:66:59.75:0,60,2280	0/0:32,0:28:40.02:0,40,1288	0/1:37,15:40:99:405,0,135	0/1:37,6:29:80.34:535,0,80	0/0:53,0:41:34.61:0,35,1506	0/0:46,0:35:72.20:0,72,1890	0/0:44,0:37:70.08:0,70,2144	0/0:55,0:50:99:0,101,3116	0/0:37,0:34:65.39:0,65,2522	0/0:59,0:26:33.11:0,33,853	0/0:38,0:32:44.82:0,45,1316	0/0:201,0:174:99:0,158,7193	1/1:37,8:29:8.22:205,8,0	0/1:18,14:28:14.61:84,0,15	1/1:59,4:53:25.71:394,26,0	0/0:36,0:30:29.94:0,30,1816	0/0:86,0:61:61.77:0,62,2368	0/0:26,0:20:54.19:0,54,1861	0/0:23,0:17:30.10:0,30,1183
chr10	76279976	.	G	GGT	3471.85	PASS	AB=0.808;AC=9;AF=0.161;AN=56;BaseQRankSum=5.267;DP=1455;FS=1.728;HRun=0;HaplotypeScore=249.2582;InbreedingCoeff=0.5272;MQ=40.48;MQ0=114;MQRankSum=-4.428;QD=11.61;ReadPosRankSum=-2.112;VQSLOD=3.1154;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:48:37:0,37,469	0/0:17,0:13:32.93:0,33,377	0/0:11,0:3:5.99:0,6,58	0/0:10,0:5:14.99:0,15,149	0/0:39,0:30:45.58:0,46,505	0/0:31,0:28:50.99:0,51,602	0/0:74,0:65:74.07:0,74,949	0/0:109,0:60:81.51:0,82,863	1/1:53,10:53:15.98:739,16,0	0/0:73,0:48:56.04:0,56,664	0/0:27,0:24:45.09:0,45,525	0/1:38,14:40:8.80:699,0,9	0/1:37,12:37:18.35:552,0,18	0/0:49,0:39:11.47:0,11,519	0/0:44,0:35:68.83:0,69,838	0/0:44,0:36:65.36:0,65,819	0/0:54,0:50:57.77:0,58,1010	0/0:43,0:36:42.79:0,43,737	0/0:46,0:26:16.76:0,17,417	0/0:44,0:32:59.82:0,60,709	0/0:196,0:161:99:0,165,2024	1/1:31,9:35:34.99:579,35,0	1/1:27,9:32:2.52:497,3,0	0/1:44,11:47:35.39:407,0,35	0/0:45,0:35:56.43:0,56,653	0/0:71,0:48:43.29:0,43,694	0/0:30,0:26:63.25:0,63,733	0/0:20,0:16:15.03:0,15,168
chr10	76281102	.	C	CG	344.86	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=0.102;DP=548;FS=9.046;HRun=1;HaplotypeScore=79.4968;InbreedingCoeff=0.6343;MQ=60.80;MQ0=6;MQRankSum=1.251;QD=8.84;ReadPosRankSum=0.904;VQSLOD=0.4342;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,18:23:35.19:437,35,0	0/0:11,0:11:26.96:0,27,267	0/1:16,0:8:10.16:10,0,28	0/0:19,0:13:11.14:0,11,116	0/0:25,0:24:56.86:0,57,522	0/0:22,0:22:57.07:0,57,623	0/0:23,0:23:60.99:0,61,661	0/0:29,0:28:69.02:0,69,690	0/0:17,0:17:42.02:0,42,377	0/0:22,0:22:60:0,60,633	0/0:12,0:12:27.92:0,28,276	0/0:18,0:18:33:0,33,291	0/0:13,0:13:33.01:0,33,298	0/0:19,0:19:53.74:0,54,492	0/0:26,0:26:59.71:0,60,574	0/0:25,0:25:56.68:0,57,614	0/0:29,0:29:69:0,69,765	0/0:33,1:34:49:0,49,791	0/0:14,0:14:38.74:0,39,364	0/0:17,0:17:51.06:0,51,542	0/0:12,0:12:32.99:0,33,340	0/0:14,0:12:26.98:0,27,231	0/0:20,0:20:35.98:0,36,318	0/0:24,0:24:68.97:0,69,615	0/0:12,0:12:20.86:0,21,163	0/0:18,0:18:39.02:0,39,390	0/0:28,0:28:62.75:0,63,623	0/0:6,0:4:11.99:0,12,122
chr10	76281103	.	GA	G	880.87	PASS	AB=0.872;AC=16;AF=0.286;AN=56;BaseQRankSum=7.441;DP=563;FS=6.748;HRun=15;HaplotypeScore=74.1753;InbreedingCoeff=0.5182;MQ=61.42;MQ0=7;MQRankSum=1.253;QD=4.54;ReadPosRankSum=3.880;VQSLOD=1.6268;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,2:26:2.20:0,2,156	0/0:10,0:11:17.16:0,17,179	0/0:17,0:8:0.12:0,0,27	0/0:20,0:13:9:0,9,79	0/0:23,3:25:15.05:0,15,233	0/0:20,2:22:23.61:0,24,325	0/0:23,0:25:28.58:0,29,360	0/1:23,2:28:3.50:4,0,279	1/1:5,8:17:23.74:133,24,0	0/0:22,1:23:25.71:0,26,346	0/0:11,1:13:2.04:0,2,126	1/1:9,8:19:18.65:108,19,0	1/1:2,9:12:25.55:159,26,0	0/0:19,0:19:29.93:0,30,248	0/1:22,3:28:30.90:31,0,275	0/0:23,1:24:25.68:0,26,337	0/0:28,2:30:43.65:0,44,491	0/0:31,2:34:43.69:0,44,452	0/0:15,0:15:24.80:0,25,201	0/1:15,2:17:5.54:6,0,204	0/0:11,2:13:1.71:0,2,135	1/1:9,5:13:10.77:63,11,0	1/1:3,15:20:30.22:196,30,0	1/1:5,17:26:59.62:353,60,0	0/1:9,1:11:7.29:7,0,60	0/0:17,1:19:0.89:0,1,157	0/0:22,1:25:19.54:0,20,278	0/0:6,0:4:8.98:0,9,75
chr10	76281378	.	AACAC	A	316.31	PASS	AB=0.972;AC=13;AF=0.271;AN=48;BaseQRankSum=2.490;DP=507;FS=1.145;HRun=0;HaplotypeScore=90.0396;InbreedingCoeff=0.5049;MQ=69.98;MQ0=11;MQRankSum=-0.176;QD=2.33;ReadPosRankSum=1.333;VQSLOD=1.7352;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:0:0,0,0	0/0:7,0:7:12.02:0,12,179	./.	./.	0/0:16,0:16:6.02:0,6,140	0/1:20,0:19:14.14:14,0,125	0/0:31,0:32:15.26:0,15,209	0/0:13,0:12:0:0,0,0	1/1:9,1:10:3.01:46,3,0	./.	0/0:10,0:10:6.02:0,6,107	1/1:10,0:10:9:99,9,0	./.	0/0:14,0:13:15.05:0,15,307	0/0:17,0:16:9.03:0,9,175	0/0:19,0:20:23.79:0,24,399	0/0:30,0:30:32.78:0,33,535	0/0:15,0:15:6.02:0,6,115	0/0:17,0:16:9.48:0,9,123	0/0:19,0:21:8.63:0,9,64	0/0:44,0:40:23.87:0,24,376	1/1:10,1:12:9.02:103,9,0	1/1:10,2:12:3.01:46,3,0	1/1:29,4:32:8.77:137,9,0	0/1:10,0:10:12.91:13,0,218	0/0:12,0:12:6.02:0,6,117	0/0:25,0:25:24.07:0,24,404	0/0:8,0:8:8.97:0,9,114
chr10	76284046	.	T	TACACAC	1307.58	PASS	AB=0.889;AC=14;AF=0.269;AN=52;BaseQRankSum=0.964;DP=803;FS=7.802;HRun=0;HaplotypeScore=191.3721;InbreedingCoeff=0.5923;MQ=51.34;MQ0=17;MQRankSum=-3.583;QD=4.72;ReadPosRankSum=-4.686;VQSLOD=0.5645;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:48:65.78:0,66,1082	0/0:13,0:13:20.27:0,20,319	./.	./.	0/0:25,0:27:29.83:0,30,432	0/0:20,0:22:21.24:0,21,256	0/0:33,0:32:18.14:0,18,530	0/1:26,0:24:6.07:6,0,89	1/1:18,15:34:15.05:465,15,0	0/0:28,0:27:18.23:0,18,366	0/0:14,0:15:24.07:0,24,417	1/1:20,6:29:6.49:134,6,0	1/1:15,8:23:9.03:289,9,0	0/0:17,0:19:15.09:0,15,519	0/0:21,0:25:17.98:0,18,238	0/0:34,0:35:21.85:0,22,794	0/1:35,0:38:11.80:12,0,905	0/1:25,0:32:81.10:81,0,359	0/0:17,0:16:11.16:0,11,298	0/0:22,0:22:4.58:0,5,231	0/0:76,0:78:32.25:0,32,1057	1/1:22,0:21:17.49:346,17,0	0/1:17,5:25:0:0,0,0	1/1:23,18:45:6.02:136,6,0	0/0:18,0:18:26.96:0,27,371	0/0:28,0:28:22.82:0,23,478	0/0:9,0:10:14.43:0,14,240	0/0:10,0:10:17.73:0,18,274
chr10	76284233	.	A	AG	815.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.075;DP=523;FS=2.450;HRun=8;HaplotypeScore=83.4243;InbreedingCoeff=0.9789;MQ=64.29;MQ0=9;MQRankSum=-1.743;QD=23.29;ReadPosRankSum=-0.911;VQSLOD=3.8982;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,31:35:81.13:910,81,0	0/0:8,0:8:23.99:0,24,213	0/0:33,0:17:30.11:0,30,349	0/0:30,0:16:39:0,39,350	0/0:22,0:21:47.72:0,48,409	0/0:14,0:14:30.01:0,30,274	0/0:24,0:23:51.01:0,51,467	0/0:20,0:20:47.91:0,48,413	0/0:13,0:13:29.40:0,29,230	0/0:19,0:19:39.01:0,39,353	0/0:15,0:15:45.02:0,45,411	0/0:12,0:11:27:0,27,241	0/0:14,0:14:35.67:0,36,323	0/0:19,0:19:44.99:0,45,403	0/0:21,0:21:51.01:0,51,461	0/0:19,0:19:43.58:0,44,368	0/0:19,0:19:50.92:0,51,450	0/0:16,0:16:30.01:0,30,274	0/0:8,0:8:18.01:0,18,165	0/0:25,0:23:65.71:0,66,547	0/0:27,0:27:35.72:0,36,292	0/0:18,0:18:47.16:0,47,373	0/0:15,0:15:33.40:0,33,291	0/0:25,0:25:45.98:0,46,486	0/0:12,0:12:23.70:0,24,226	0/0:13,0:13:27:0,27,242	0/0:20,0:18:35.87:0,36,311	0/0:7,0:7:20.96:0,21,179
chr10	76284675	.	GGA	G	167.29	PASS	AB=0.953;AC=14;AF=0.280;AN=50;BaseQRankSum=1.174;DP=488;FS=11.180;HRun=0;HaplotypeScore=62.1936;InbreedingCoeff=-0.0248;MQ=50.10;MQ0=27;MQRankSum=1.378;QD=0.95;ReadPosRankSum=-1.559;VQSLOD=-0.0135;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:9,0:8:9:0,9,92	./.	./.	1/1:14,0:15:2.84:14,3,0	1/1:14,0:14:8.79:63,9,0	0/0:20,0:20:24.01:0,24,291	0/0:27,0:26:2.49:0,2,6	0/0:11,0:11:6:0,6,54	0/0:23,0:21:5.90:0,6,43	0/0:18,0:18:8.75:0,9,85	0/0:14,0:12:3.01:0,3,30	0/0:11,0:8:5.99:0,6,48	0/1:11,1:12:39.18:39,0,115	0/1:25,1:25:14.29:14,0,130	0/1:14,1:15:37.17:37,0,132	0/1:24,3:26:23.17:23,0,48	0/1:16,2:17:23.17:23,0,70	0/1:13,0:11:15.55:16,0,17	0/0:22,0:21:9.02:0,9,113	0/0:34,0:31:0.15:0,0,137	1/1:11,0:9:2.84:14,3,0	0/0:14,0:10:0:0,0,0	0/0:21,0:19:6:0,6,55	0/1:15,0:15:35.15:41,0,35	0/0:20,0:19:14.93:0,15,119	0/1:11,0:11:18.97:19,0,38	0/0:15,0:12:0.47:0,0,1
chr10	76285665	.	TAA	T	1754.52	PASS	AB=0.909;AC=13;AF=0.232;AN=56;BaseQRankSum=5.488;DP=632;FS=0.472;HRun=14;HaplotypeScore=82.5578;InbreedingCoeff=0.9274;MQ=66.66;MQ0=13;MQRankSum=1.162;QD=13.29;ReadPosRankSum=5.706;VQSLOD=2.7321;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,1:28:15.17:0,15,111	0/0:6,0:8:23.50:0,23,252	0/0:17,0:13:31.20:0,31,294	0/1:9,1:5:2.47:2,0,74	0/0:29,0:35:87.89:0,88,1002	0/0:11,0:17:41.06:0,41,456	0/0:16,0:18:44.12:0,44,563	0/0:36,0:34:74.65:0,75,932	1/1:4,19:23:35.97:333,36,0	0/0:28,0:28:63.10:0,63,778	0/0:21,0:21:45.12:0,45,595	1/1:3,15:18:33.02:305,33,0	1/1:3,12:15:33.01:304,33,0	0/0:15,0:16:32.57:0,33,393	0/0:19,0:21:44.52:0,45,536	0/0:28,0:28:63.06:0,63,774	0/0:24,0:30:51.14:0,51,668	0/0:23,0:21:51.10:0,51,659	0/0:15,0:15:23.53:0,24,281	0/0:24,0:23:60.04:0,60,730	0/0:6,0:6:15.03:0,15,178	1/1:4,12:16:33.01:304,33,0	1/1:6,24:30:47.75:443,48,0	1/1:3,17:18:27.02:250,27,0	0/0:23,0:23:57.16:0,57,738	0/0:8,0:35:90.62:0,91,899	0/0:41,0:40:99:0,105,1377	0/0:10,0:22:43.30:0,43,433
chr10	76290794	.	TA	T	460.02	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=5.549;DP=392;FS=0.000;HRun=13;HaplotypeScore=48.4254;InbreedingCoeff=0.3050;MQ=61.35;MQ0=5;MQRankSum=-0.770;QD=9.02;ReadPosRankSum=-0.535;VQSLOD=1.9751;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:31:73.61:531,74,0	0/0:4,0:4:12.02:0,12,117	0/0:35,0:12:7.18:0,7,82	0/1:14,0:7:5.46:5,0,63	0/0:15,0:18:38.73:0,39,350	0/0:11,0:11:27.04:0,27,258	0/0:9,0:8:24.04:0,24,233	0/0:22,0:22:38.82:0,39,353	0/0:6,0:5:12.02:0,12,117	0/0:17,0:17:41.69:0,42,373	0/0:13,1:15:13.98:0,14,284	0/0:7,0:7:12.82:0,13,107	0/1:6,0:6:20.27:33,0,20	0/0:5,0:5:15.01:0,15,140	0/0:10,0:10:23.99:0,24,224	0/0:7,0:7:12.02:0,12,117	0/0:21,0:21:20.30:0,20,357	0/0:24,2:29:27.71:0,28,531	0/0:18,0:22:8.62:0,9,297	0/0:15,0:15:30.01:0,30,274	0/0:5,0:5:12.01:0,12,112	0/0:6,0:6:7.63:0,8,110	0/0:6,0:7:17.82:0,18,150	0/0:1,0:1:3:0,3,29	0/0:23,0:25:34.22:0,34,447	0/0:13,0:16:34.53:0,35,288	0/0:12,0:13:9.51:0,10,210	0/0:12,1:13:2.13:0,2,183
chr10	76290903	.	TGA	T	663.42	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.552;DP=525;FS=2.190;HRun=0;HaplotypeScore=73.8212;InbreedingCoeff=0.9683;MQ=89.10;MQ0=0;MQRankSum=-6.790;QD=25.52;ReadPosRankSum=0.616;VQSLOD=4.4805;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:53.94:758,54,0	0/0:14,0:14:42.14:0,42,798	0/0:21,0:21:60.21:0,60,1113	0/0:19,0:20:56.75:0,57,988	0/0:21,0:21:60.21:0,60,1159	0/0:21,0:21:63.22:0,63,1215	0/0:26,0:26:75.26:0,75,1440	0/0:29,0:29:87.28:0,87,1618	0/0:20,0:19:57.18:0,57,1066	0/0:19,0:19:51.17:0,51,985	0/0:12,0:12:30.10:0,30,571	0/0:17,0:17:51.16:0,51,952	0/0:12,0:12:36.12:0,36,694	0/0:11,0:11:30.10:0,30,561	0/0:17,0:17:51.17:0,51,976	0/0:11,0:11:30.10:0,30,572	0/0:46,0:46:99:0,129,2481	0/0:17,0:17:51.17:0,51,985	0/0:22,0:22:60.20:0,60,1122	0/0:17,0:17:48.16:0,48,926	0/0:21,0:21:63.20:0,63,1183	0/0:12,0:12:36.12:0,36,685	0/0:13,0:13:39.13:0,39,752	0/0:15,0:15:45.15:0,45,859	0/0:11,0:11:33.11:0,33,637	0/0:18,0:18:54.18:0,54,1012	0/0:32,0:32:84.29:0,84,1616	0/0:4,0:4:12.04:0,12,232
chr10	76290908	.	TGACTGGAAGGCAAAC	T	1571.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.243;DP=513;FS=2.218;HRun=0;HaplotypeScore=208.4646;InbreedingCoeff=0.9614;MQ=86.57;MQ0=0;MQRankSum=-6.832;QD=65.48;ReadPosRankSum=-1.131;VQSLOD=3.3662;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,14:24:50.66:1666,51,0	0/0:14,0:14:39.12:0,39,2658	0/0:19,0:19:57.06:0,57,2766	0/0:18,0:18:19.48:0,19,2379	0/0:22,0:22:63.18:0,63,3878	0/0:23,0:23:69.22:0,69,4574	0/0:25,0:25:72.25:0,72,5151	0/0:26,0:26:75.22:0,75,4291	0/0:20,0:20:60.16:0,60,3695	0/0:18,0:18:54.17:0,54,3313	0/0:9,0:9:26.96:0,27,1562	0/0:16,0:16:48.14:0,48,3223	0/0:13,0:13:39.11:0,39,2216	0/0:10,0:10:30.09:0,30,2042	0/0:17,0:17:48.13:0,48,2727	0/0:10,0:10:27.06:0,27,1606	0/0:49,0:49:99:0,138,9424	0/0:17,0:17:51.18:0,51,3633	0/0:18,0:18:54.19:0,54,3486	0/0:15,0:15:45.14:0,45,2698	0/0:26,0:26:75.26:0,75,5353	0/0:11,0:11:33.08:0,33,1490	0/0:15,0:15:42.13:0,42,2335	0/0:14,0:14:39.13:0,39,2915	0/0:10,0:10:30.10:0,30,2067	0/0:19,0:19:57.18:0,57,3689	0/0:31,0:31:87.27:0,87,5622	0/0:4,0:4:12.02:0,12,705
chr10	76291972	.	T	TACACAC	4109.82	PASS	AB=1.000;AC=39;AF=0.750;AN=52;BaseQRankSum=-1.838;DP=569;FS=0.718;HRun=0;HaplotypeScore=150.8726;InbreedingCoeff=0.6618;MQ=42.13;MQ0=64;MQRankSum=-3.712;QD=10.15;ReadPosRankSum=-2.217;VQSLOD=2.6223;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,9:37:11.79:323,12,0	1/1:5,5:11:6.02:193,6,0	./.	./.	1/1:17,0:16:14.83:329,15,0	1/1:16,0:24:1.30:86,1,0	1/1:15,2:22:6.02:75,6,0	1/1:22,0:20:10.26:144,10,0	0/0:17,0:18:22.29:0,22,331	1/1:20,0:19:23.13:365,23,0	1/1:17,1:21:3.01:39,3,0	0/0:24,0:24:33.56:0,34,579	0/0:12,0:13:18.06:0,18,320	1/1:12,4:14:9.50:289,10,0	1/1:19,1:26:12.05:291,12,0	1/1:12,7:22:5.42:191,5,0	1/1:13,0:17:14.18:340,14,0	1/1:5,0:10:1.50:35,1,0	1/1:14,3:16:12.01:214,12,0	0/1:22,0:22:0:0,0,0	1/1:15,0:22:15.05:314,15,0	0/0:20,0:22:5.09:0,5,367	0/0:14,0:15:18.05:0,18,309	0/0:23,0:24:48.06:0,48,929	1/1:12,0:11:6.01:132,6,0	1/1:18,0:17:30.08:613,30,0	1/1:19,6:25:3.01:96,3,0	1/1:6,0:6:3.48:39,3,0
chr10	76292556	.	AACACACACACAC	A	3435.94	PASS	AB=0.791;AC=34;AF=0.630;AN=54;BaseQRankSum=3.067;DP=587;FS=37.445;HRun=0;HaplotypeScore=182.6286;InbreedingCoeff=0.6067;MQ=60.87;MQ0=16;MQRankSum=-4.255;QD=9.60;ReadPosRankSum=2.232;VQSLOD=0.9060;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:27:11.89:0,12,96	1/1:7,0:7:2.68:11,3,0	0/0:34,0:25:5.04:0,5,45	0/0:26,0:19:5.97:0,6,45	1/1:18,0:19:3.01:59,3,0	1/1:14,8:22:3.01:95,3,0	1/1:11,6:17:5.76:197,6,0	1/1:32,0:27:4.77:47,5,0	0/0:23,0:24:18.06:0,18,771	1/1:19,0:17:8.97:123,9,0	1/1:8,5:13:6.02:184,6,0	0/0:14,0:19:15.05:0,15,649	0/0:17,0:21:32.96:0,33,1145	1/1:10,10:21:12.04:363,12,0	1/1:18,8:26:12.03:392,12,0	1/1:16,8:24:12.04:414,12,0	1/1:14,8:21:3.01:103,3,0	0/1:11,4:15:2.30:198,0,2	0/1:14,4:15:2.95:274,0,3	1/1:15,1:17:7.58:268,8,0	1/1:30,0:28:5.58:106,6,0	0/0:17,0:16:12.04:0,12,562	0/0:14,0:12:15.05:0,15,639	0/0:34,0:38:33.09:0,33,1135	1/1:11,3:14:5.91:120,6,0	1/1:20,11:32:20.85:378,21,0	1/1:7,2:9:3.01:104,3,0	./.
chr10	76295233	.	T	TC	1208.74	PASS	AC=38;AF=0.864;AN=44;BaseQRankSum=-4.687;DP=83;FS=0.000;HRun=3;HaplotypeScore=31.1681;InbreedingCoeff=0.3479;MQ=94.29;MQ0=0;MQRankSum=-4.816;QD=18.89;ReadPosRankSum=0.335;VQSLOD=2.6869;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,5:8:12.04:165,12,0	./.	0/0:8,0:7:11.40:0,11,94	0/0:6,0:5:13.58:0,14,133	./.	1/1:2,3:5:6.02:84,6,0	1/1:0,2:2:3.01:42,3,0	1/1:3,3:6:9.03:126,9,0	1/1:2,1:3:3.01:42,3,0	1/1:2,0:2:3.01:39,3,0	./.	1/1:0,3:3:6.02:84,6,0	1/1:1,2:3:6.02:84,6,0	1/1:0,3:3:6.02:77,6,0	1/1:2,2:4:3.01:42,3,0	1/1:1,0:1:2.88:15,3,0	1/1:1,2:3:8.06:90,8,0	1/1:0,1:1:3.01:42,3,0	1/1:2,3:5:9.03:126,9,0	./.	1/1:2,4:6:2.97:20,3,0	./.	1/1:0,3:3:5.85:56,6,0	1/1:0,2:2:3.01:42,3,0	1/1:0,3:3:9.03:126,9,0	./.	1/1:1,0:1:3:26,3,0	0/0:3,0:3:1.80:0,2,5
chr10	76296644	.	AAAAC	A	4403.26	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-3.753;DP=604;FS=1.458;HRun=0;HaplotypeScore=80.0471;InbreedingCoeff=0.6164;MQ=44.01;MQ0=65;MQRankSum=-1.127;QD=9.12;ReadPosRankSum=-4.462;VQSLOD=2.1254;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:20.03:0,20,781	1/1:10,1:10:13.16:106,13,0	0/1:43,0:7:1.84:2,0,39	0/1:38,0:6:21.17:21,0,57	1/1:28,0:25:3.45:42,3,0	1/1:21,1:22:38.91:441,39,0	1/1:20,1:18:47.37:388,47,0	1/1:29,0:27:51.74:435,52,0	0/0:17,0:17:8.45:0,8,330	1/1:22,0:19:33.64:230,34,0	1/1:25,0:21:17.80:119,18,0	0/0:13,0:13:3.88:0,4,171	0/0:12,0:12:1.85:0,2,289	1/1:11,0:10:2.96:19,3,0	1/1:18,2:19:43.33:366,43,0	1/1:14,0:12:23.52:154,24,0	1/1:33,2:29:27.06:392,27,0	1/1:15,2:13:8.46:70,8,0	0/1:19,0:15:18.38:214,0,18	1/1:25,0:22:23.22:167,23,0	1/1:10,0:4:8.94:67,9,0	0/0:20,0:19:34.95:0,35,354	0/0:16,0:16:7.37:0,7,244	0/0:13,0:10:17.89:0,18,280	1/1:16,2:17:42.33:297,42,0	1/1:29,0:27:56.24:427,56,0	1/1:25,1:25:42.76:307,43,0	1/1:20,0:15:10.83:140,11,0
chr10	76296645	.	AAAC	A	5106.24	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=-3.226;DP=608;FS=2.766;HRun=0;HaplotypeScore=71.8595;InbreedingCoeff=0.5136;MQ=44.31;MQ0=64;MQRankSum=-0.920;QD=9.65;ReadPosRankSum=-3.552;VQSLOD=3.0067;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:7.63:0,8,560	1/1:2,9:10:14.90:129,15,0	0/1:43,0:7:1.84:2,0,39	0/1:38,0:6:21.23:21,0,39	1/1:5,23:25:15.36:74,15,0	1/1:23,0:23:55.06:494,55,0	1/1:21,0:18:47.57:397,48,0	1/1:29,0:27:68.59:518,69,0	0/1:17,0:17:9.03:9,0,204	1/1:3,19:19:33.69:233,34,0	1/1:25,0:21:17.83:137,18,0	0/1:13,0:13:2.35:2,0,94	0/1:12,0:12:4.66:5,0,205	1/1:12,0:11:3.01:38,3,0	1/1:21,0:20:47.78:395,48,0	1/1:14,0:12:23.78:175,24,0	1/1:35,0:29:51.81:466,52,0	1/1:18,0:14:8.94:86,9,0	0/1:19,0:15:2.74:277,0,3	1/1:25,0:22:23.85:188,24,0	1/1:11,0:5:11.95:101,12,0	0/0:21,0:20:27.34:0,27,271	0/0:17,0:17:9.78:0,10,220	0/0:13,0:10:17.83:0,18,211	1/1:18,0:17:44.52:313,45,0	1/1:2,27:27:61.86:467,62,0	1/1:25,1:25:58.86:380,59,0	1/1:18,1:15:28.21:200,28,0
chr10	76296646	.	AAC	A	5279.19	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-2.058;DP=605;FS=3.027;HRun=0;HaplotypeScore=64.2840;InbreedingCoeff=0.2413;MQ=44.46;MQ0=64;MQRankSum=-2.157;QD=9.18;ReadPosRankSum=-2.790;VQSLOD=4.0007;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:26:12.63:13,0,357	1/1:11,0:10:14.88:110,15,0	0/1:43,0:7:1.85:2,0,39	0/1:38,0:6:21.68:22,0,29	1/1:27,0:24:17.19:107,17,0	1/1:22,1:23:63.42:477,63,0	1/1:20,1:18:47.57:356,48,0	1/1:29,1:28:76.79:556,77,0	0/1:17,0:17:29.17:29,0,96	1/1:22,0:19:32.64:233,33,0	1/1:5,20:21:17.83:125,18,0	0/1:13,0:13:41.86:42,0,45	0/1:12,0:12:30.26:30,0,136	1/1:1,11:11:3:29,3,0	1/1:20,1:20:47.73:363,48,0	1/1:14,0:12:23.80:178,24,0	1/1:34,1:29:65.87:491,66,0	1/1:15,2:14:9.01:90,9,0	1/1:20,0:15:6.65:292,7,0	1/1:4,21:22:23.83:174,24,0	1/1:11,0:5:11.95:98,12,0	0/1:20,0:19:3.15:3,0,163	0/0:17,0:17:4.46:0,4,172	0/0:13,0:10:16.23:0,16,140	1/1:17,1:17:44.51:307,45,0	1/1:29,0:27:62.45:462,62,0	1/1:27,0:26:62.10:451,62,0	1/1:17,0:14:33.83:239,34,0
chr10	76296647	.	AC	A	5346.32	PASS	AB=0.984;AC=46;AF=0.821;AN=56;BaseQRankSum=-1.805;DP=598;FS=4.270;HRun=1;HaplotypeScore=58.6714;InbreedingCoeff=0.0545;MQ=44.98;MQ0=60;MQRankSum=-2.540;QD=9.20;ReadPosRankSum=-1.111;VQSLOD=1.8676;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,1:26:34.33:34,0,218	1/1:11,0:10:14.81:98,15,0	0/1:42,1:7:1.85:2,0,39	0/1:35,3:6:18.35:28,0,18	1/1:26,0:23:14.87:107,15,0	1/1:24,0:24:68.40:509,68,0	1/1:21,0:18:47.34:317,47,0	1/1:5,25:28:77.43:563,77,0	0/1:17,0:17:22.62:68,0,23	1/1:22,0:19:32.31:234,32,0	1/1:24,0:20:17.79:119,18,0	0/1:13,0:13:25.53:72,0,26	0/1:14,0:14:32.38:32,0,98	1/1:11,0:11:2.98:21,3,0	1/1:21,0:20:47.52:333,48,0	1/1:14,0:12:26.77:192,27,0	1/1:33,0:29:68.19:459,68,0	1/1:6,10:14:8.93:65,9,0	1/1:6,14:15:15.53:284,16,0	1/1:24,0:21:23.74:161,24,0	1/1:11,0:5:11.94:91,12,0	0/1:20,0:19:12.25:12,0,113	0/0:17,0:17:2.87:0,3,136	0/1:13,0:10:6.51:7,0,66	1/1:17,0:16:44.55:318,45,0	1/1:29,0:27:62.23:456,62,0	1/1:25,0:24:68.26:507,68,0	1/1:17,0:14:34.31:258,34,0
chr10	76297096	.	AAC	A	56	PASS	AB=0.975;AC=19;AF=0.365;AN=52;BaseQRankSum=6.577;DP=610;FS=7.441;HRun=0;HaplotypeScore=106.4161;InbreedingCoeff=0.1988;MQ=57.32;MQ0=14;MQRankSum=-1.119;QD=0.23;ReadPosRankSum=0.758;VQSLOD=1.6152;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,9:58:45.10:0,45,1497	0/0:6,0:6:1.55:0,2,4	0/0:39,0:19:15.38:0,15,218	0/0:34,0:14:11.82:0,12,82	0/0:16,0:15:8.96:0,9,69	0/1:15,0:15:4.95:5,0,17	./.	0/0:16,0:14:12.66:0,13,78	0/0:22,2:24:18.18:0,18,734	1/1:26,0:24:4.35:13,4,0	1/1:7,0:7:2.91:20,3,0	0/0:32,1:32:50.12:0,50,1245	0/0:28,0:28:24.43:0,24,842	1/1:25,0:25:5.16:28,5,0	1/1:22,0:22:2.04:6,2,0	0/1:22,0:22:15.71:18,0,16	./.	0/0:9,0:9:4.18:0,4,23	0/0:19,0:18:4.17:0,4,79	0/0:15,0:15:8.79:0,9,56	0/0:25,0:24:4.37:0,4,27	0/1:25,1:26:8.75:9,0,814	0/1:26,3:29:38.69:39,0,846	0/1:39,2:41:20.64:21,0,1088	1/1:4,0:4:2.68:11,3,0	0/1:11,0:11:3.68:4,0,5	0/1:9,0:9:12.75:18,0,13	1/1:9,0:9:2.46:11,2,0
chr10	76297116	.	CAGACACACAG	C	5845.89	PASS	AB=1.000;AC=36;AF=0.692;AN=52;BaseQRankSum=9.422;DP=691;FS=3.839;HRun=0;HaplotypeScore=175.4988;InbreedingCoeff=0.7153;MQ=54.85;MQ0=19;MQRankSum=-6.537;QD=14.69;ReadPosRankSum=-7.139;VQSLOD=1.4666;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:55:99:0,130,5117	1/1:0,11:11:6.02:123,6,0	0/1:37,0:13:26.15:26,0,215	0/1:46,0:14:22.18:22,0,160	1/1:19,0:18:5.79:39,6,0	1/1:16,2:18:32.93:430,33,0	./.	1/1:19,0:17:41.23:403,41,0	0/0:25,0:25:66.19:0,66,1968	1/1:2,22:22:51:632,51,0	1/1:8,0:8:9.01:129,9,0	0/0:40,0:39:99:0,111,3878	0/0:27,0:27:78.21:0,78,2891	1/1:1,24:25:6.02:171,6,0	1/1:0,24:24:3.01:100,3,0	1/1:2,22:25:11.72:323,12,0	./.	1/1:13,0:13:38.73:432,39,0	1/1:16,0:15:29.23:332,29,0	1/1:24,1:25:45.06:547,45,0	1/1:36,1:35:57.01:668,57,0	0/0:27,0:27:78.24:0,78,2925	0/0:31,0:31:87.06:0,87,2989	0/0:39,0:39:99:0,105,4095	1/1:7,2:9:9.49:160,9,0	1/1:16,1:17:46.75:565,47,0	1/1:16,2:18:45.86:555,46,0	1/1:6,1:7:10.83:189,11,0
chr10	76297124	.	CAG	C	2858.09	PASS	AB=1.000;AC=34;AF=0.630;AN=54;BaseQRankSum=11.700;DP=682;FS=1.702;HRun=0;HaplotypeScore=121.8934;InbreedingCoeff=0.7319;MQ=56.09;MQ0=17;MQRankSum=-3.331;QD=8.17;ReadPosRankSum=-4.859;VQSLOD=2.6902;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:51:99:0,113,2167	1/1:11,0:11:5.60:28,6,0	0/1:39,0:16:9.65:10,0,313	0/0:51,0:17:6.65:0,7,287	0/0:2,15:16:2.68:0,3,11	1/1:17,0:17:23.83:182,24,0	1/1:23,0:23:2.50:9,2,0	1/1:19,1:18:32.71:291,33,0	0/0:24,0:24:65.99:0,66,947	1/1:23,0:22:47.88:388,48,0	1/1:8,0:8:9:86,9,0	0/0:38,0:37:59.39:0,59,1529	0/0:27,0:27:64.81:0,65,1142	1/1:25,0:25:5.89:38,6,0	1/1:24,0:24:2.98:21,3,0	1/1:23,0:23:11.42:81,11,0	./.	1/1:14,0:14:38.16:273,38,0	0/1:13,0:13:1.11:169,0,1	1/1:27,0:27:39.62:295,40,0	1/1:33,0:32:44.88:360,45,0	0/0:28,0:28:66.09:0,66,1254	0/0:29,0:29:84.21:0,84,1386	0/0:39,0:39:83.85:0,84,1683	1/1:9,0:9:8.97:70,9,0	1/1:17,0:17:40.69:336,41,0	1/1:19,0:19:48.28:335,48,0	1/1:5,0:5:11.80:82,12,0
chr10	76297909	.	C	CA	4597.34	PASS	AB=0.744;AC=32;AF=0.571;AN=56;BaseQRankSum=-7.376;DP=656;FS=2.283;HRun=14;HaplotypeScore=82.5789;InbreedingCoeff=-0.1591;MQ=73.63;MQ0=1;MQRankSum=-1.192;QD=8.12;ReadPosRankSum=-3.547;VQSLOD=3.3243;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:32:32.94:0,33,305	0/1:4,6:10:17.54:111,0,18	0/1:20,0:14:6.06:6,0,50	0/0:17,0:12:6.04:0,6,28	0/1:14,12:27:74.26:208,0,74	0/1:8,9:17:10.98:158,0,11	0/1:11,12:26:1.31:325,0,1	1/1:13,12:26:26.59:251,27,0	0/1:19,0:20:10.50:11,0,83	1/1:9,19:33:43.03:444,43,0	0/1:9,9:19:47.17:99,0,47	0/1:22,0:22:8.92:9,0,77	0/0:22,0:24:16.91:0,17,163	1/1:8,14:22:20.84:172,21,0	1/1:7,23:30:10.70:328,11,0	0/1:13,12:26:42.02:185,0,42	0/1:9,16:26:38.82:220,0,39	0/1:4,11:16:15.97:228,0,16	1/1:7,6:15:13.35:206,13,0	1/1:9,21:31:20.42:408,20,0	0/1:8,4:15:24.82:139,0,25	0/0:14,0:17:32.58:0,33,191	0/1:19,2:24:26.58:27,0,184	0/1:22,1:26:28:28,0,164	1/1:6,14:22:0.25:232,0,0	1/1:18,20:39:10.36:444,10,0	0/1:13,27:40:15.23:248,0,15	0/1:5,8:13:17.54:111,0,18
chr10	76299294	.	A	ATGTGTG	9396.46	PASS	AB=0.737;AC=36;AF=0.667;AN=54;BaseQRankSum=-0.598;DP=760;FS=0.915;HRun=0;HaplotypeScore=186.8632;InbreedingCoeff=0.6415;MQ=67.14;MQ0=6;MQRankSum=-5.653;QD=18.10;ReadPosRankSum=-3.602;VQSLOD=3.5424;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:47:75.24:0,75,1049	1/1:6,2:9:12.04:331,12,0	./.	0/0:34,0:23:7.29:0,7,108	0/1:14,0:30:40.53:242,0,41	1/1:7,8:21:24.08:618,24,0	1/1:14,6:20:15.05:485,15,0	1/1:23,0:23:18.92:346,19,0	0/0:34,0:39:37.33:0,37,1255	1/1:23,7:32:42.42:1029,42,0	1/1:10,5:20:24.08:587,24,0	0/1:30,0:32:17.92:18,0,1170	0/0:22,0:24:39.12:0,39,741	1/1:19,7:28:21.79:617,22,0	1/1:9,9:25:29.93:854,30,0	1/1:13,5:21:23.92:659,24,0	1/1:21,2:34:30.09:678,30,0	1/1:9,0:19:17.08:193,17,0	1/1:11,0:14:12.04:164,12,0	0/1:12,1:25:32.63:433,0,33	0/1:24,1:57:11.11:349,0,11	0/0:12,0:13:30.09:0,30,545	0/0:12,0:14:27.09:0,27,502	0/0:34,0:35:61.49:0,61,1178	1/1:6,0:20:23.13:306,23,0	1/1:19,0:38:63.96:935,64,0	1/1:15,1:29:19.50:309,20,0	1/1:9,0:15:18.06:243,18,0
chr10	76300247	.	G	GA	7908.39	PASS	AB=0.833;AC=38;AF=0.679;AN=56;BaseQRankSum=-12.740;DP=642;FS=5.794;HRun=10;HaplotypeScore=71.7479;InbreedingCoeff=0.7954;MQ=78.80;MQ0=3;MQRankSum=-0.750;QD=19.38;ReadPosRankSum=0.369;VQSLOD=5.7265;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:51:99:0,122,983	0/1:3,3:6:18.63:26,0,19	0/0:45,0:32:16.90:0,17,271	0/1:40,0:24:25.03:25,0,195	1/1:4,16:20:20.51:423,21,0	1/1:4,16:21:44.95:462,45,0	1/1:5,16:23:50.83:508,51,0	1/1:8,16:24:26.03:440,26,0	0/0:31,0:31:86.82:0,87,701	1/1:6,21:27:60.11:617,60,0	1/1:1,11:13:32.92:335,33,0	0/0:14,0:15:37.98:0,38,301	0/0:19,0:19:41.91:0,42,344	1/1:4,21:26:51.55:621,52,0	1/1:8,15:23:6.85:459,7,0	1/1:4,17:21:42.11:448,42,0	1/1:3,18:22:41.26:474,41,0	1/1:1,19:20:48.12:512,48,0	1/1:3,8:11:21.05:224,21,0	1/1:2,16:18:45.08:468,45,0	1/1:8,18:26:26.49:487,26,0	0/0:20,2:22:21.93:0,22,386	0/0:23,0:23:68.72:0,69,540	0/0:28,0:28:74.81:0,75,602	1/1:3,15:19:38.93:397,39,0	1/1:10,17:28:32.33:530,32,0	1/1:2,16:18:42:421,42,0	1/1:0,2:2:3.01:32,3,0
chr10	76306741	.	T	TA	6540.47	PASS	AB=0.893;AC=40;AF=0.714;AN=56;BaseQRankSum=-1.657;DP=427;FS=2.145;HRun=11;HaplotypeScore=53.1215;InbreedingCoeff=0.7584;MQ=76.71;MQ0=0;MQRankSum=-2.245;QD=20.31;ReadPosRankSum=-1.833;VQSLOD=5.2582;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:82.69:0,83,626	1/1:1,5:6:12.02:122,12,0	0/1:8,0:11:14.05:14,0,47	0/0:14,0:14:0.09:0,0,65	1/1:5,17:25:38.32:508,38,0	1/1:2,10:12:21.04:210,21,0	1/1:5,15:20:36.96:367,37,0	1/1:11,21:32:66.13:665,66,0	0/0:16,0:16:41.79:0,42,320	1/1:5,7:13:23.83:216,24,0	1/1:5,8:13:3.84:220,4,0	0/0:7,0:7:17.91:0,18,137	0/0:16,0:17:37.85:0,38,282	1/1:4,8:12:21.04:210,21,0	1/1:5,18:23:48.10:487,48,0	1/1:1,15:16:36.07:365,36,0	1/1:3,23:26:69.14:700,69,0	1/1:1,16:16:36.07:366,36,0	1/1:3,20:23:59.13:577,59,0	1/1:0,11:11:27:262,27,0	1/1:0,11:11:30.06:305,30,0	0/0:6,0:6:17.93:0,18,139	0/0:12,0:12:26.89:0,27,209	0/1:8,3:11:6.53:7,0,138	1/1:0,5:5:12.02:122,12,0	1/1:4,15:19:42.07:420,42,0	1/1:0,10:10:24.05:244,24,0	1/1:1,5:6:15.03:152,15,0
chr10	76307341	.	CTAAACA	C	10321.39	PASS	AB=0.533;AC=19;AF=0.339;AN=56;BaseQRankSum=13.942;DP=483;FS=9.781;HRun=0;HaplotypeScore=107.8500;InbreedingCoeff=0.9331;MQ=75.71;MQ0=0;MQRankSum=-15.465;QD=64.51;ReadPosRankSum=2.395;VQSLOD=5.3203;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:45.14:0,45,1558	1/1:0,15:15:36.12:919,36,0	0/0:21,0:21:62.86:0,63,1784	0/0:13,0:13:33.07:0,33,918	0/0:41,0:41:99:0,120,4371	1/1:0,16:16:39.13:995,39,0	0/1:1,7:8:7.04:512,0,7	1/1:0,18:18:53.89:1088,54,0	0/0:13,0:13:39.13:0,39,1404	1/1:0,18:18:51.18:1301,51,0	1/1:0,16:16:33.11:838,33,0	0/0:15,0:15:45.15:0,45,1555	0/0:14,0:14:42.13:0,42,1488	1/1:0,11:11:30.10:765,30,0	1/1:0,27:27:69.24:1760,69,0	1/1:0,21:21:60.21:1530,60,0	1/1:0,10:10:24.08:613,24,0	0/0:12,0:12:36.12:0,36,1289	0/0:15,0:14:45.14:0,45,1547	0/0:34,0:34:99:0,102,3781	0/0:15,0:15:45.15:0,45,1643	0/0:12,0:12:36.12:0,36,1333	0/0:19,0:19:57.20:0,57,2111	0/0:11,0:11:33.11:0,33,1196	0/0:17,0:17:51.18:0,51,1854	0/0:22,0:22:66.23:0,66,2420	0/0:24,0:23:72.23:0,72,2541	0/0:10,0:10:30.10:0,30,1113
chr10	76307611	.	GTAAGGTCTACT	G	13295.01	PASS	AB=0.960;AC=21;AF=0.375;AN=56;BaseQRankSum=15.623;DP=506;FS=3.850;HRun=0;HaplotypeScore=168.1517;InbreedingCoeff=0.9117;MQ=87.65;MQ0=0;MQRankSum=-13.963;QD=69.24;ReadPosRankSum=1.988;VQSLOD=4.6696;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.08:0,42,2077	1/1:0,9:9:21.07:749,21,0	0/0:26,0:26:69.19:0,69,2947	0/0:19,0:19:28.84:0,29,1943	0/0:17,0:17:48.16:0,48,2549	1/1:0,28:28:54.19:1925,54,0	1/1:1,20:21:36.06:1172,36,0	1/1:2,21:23:63.19:1629,63,0	0/0:24,0:24:72.23:0,72,3790	1/1:0,11:11:30.10:1070,30,0	1/1:2,13:15:39.12:1265,39,0	0/0:20,0:20:57.20:0,57,3085	0/0:22,0:22:66.23:0,66,3674	1/1:2,12:14:42.14:1492,42,0	1/1:3,20:23:48.16:1710,48,0	1/1:1,20:21:54.19:1924,54,0	1/1:0,3:3:9.03:321,9,0	0/0:12,0:12:33.11:0,33,1904	0/0:8,0:8:24.08:0,24,882	0/0:23,0:23:63.20:0,63,3282	0/0:28,0:28:81.28:0,81,4462	0/0:14,0:14:39.13:0,39,2003	0/0:19,0:19:54.14:0,54,2425	0/0:12,0:12:36.12:0,36,1967	0/0:17,0:17:51.17:0,51,2573	0/1:23,1:24:37.77:38,0,3668	0/0:33,0:33:96.33:0,96,5492	0/0:5,0:5:15.05:0,15,866
chr10	76310430	.	AAG	A	498.64	PASS	AB=0.965;AC=13;AF=0.232;AN=56;BaseQRankSum=4.626;DP=429;FS=56.377;HRun=0;HaplotypeScore=56.8620;InbreedingCoeff=-0.1106;MQ=54.73;MQ0=21;MQRankSum=0.943;QD=2.54;ReadPosRankSum=1.401;VQSLOD=-0.2475;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:73.89:0,74,740	0/0:1,0:1:2.99:0,3,23	0/0:23,2:5:11.67:0,12,77	0/1:27,0:8:4.35:4,0,5	0/1:14,1:13:81.47:81,0,95	0/1:18,0:16:13.69:37,0,14	0/1:7,0:7:7.86:11,0,8	0/1:14,2:15:60.82:86,0,61	0/0:13,0:12:31.46:0,31,299	0/1:13,0:12:28.76:29,0,66	0/1:14,0:13:12.89:13,0,75	0/0:14,0:13:3.17:0,3,250	0/0:9,0:9:25.68:0,26,248	0/1:9,0:9:63.52:66,0,64	1/1:16,0:13:9:122,9,0	0/1:8,1:9:17.95:18,0,59	0/1:35,5:37:88.12:172,0,88	0/0:25,0:25:34.90:0,35,318	0/0:14,0:13:14.92:0,15,161	0/1:12,0:10:7.69:8,0,62	0/0:14,0:13:9.76:0,10,125	0/0:1,0:1:2.84:0,3,14	0/0:6,0:6:12.69:0,13,76	0/0:16,0:15:26.35:0,26,362	0/0:12,0:12:8.62:0,9,130	0/0:10,0:10:16.82:0,17,152	0/0:25,0:22:3.26:0,3,143	0/0:15,0:14:25.63:0,26,173
chr10	76310432	.	GAA	G	1418.08	PASS	AB=0.752;AC=19;AF=0.352;AN=54;BaseQRankSum=-2.080;DP=428;FS=1.756;HRun=15;HaplotypeScore=55.1261;InbreedingCoeff=0.3084;MQ=55.84;MQ0=21;MQRankSum=0.393;QD=6.53;ReadPosRankSum=2.571;VQSLOD=-0.5821;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:63.06:0,63,729	./.	0/0:26,0:5:11.75:0,12,108	0/0:29,0:10:10.59:0,11,49	0/1:12,1:12:36.94:37,0,46	1/1:5,12:16:23.72:195,24,0	0/1:2,4:6:0.19:44,0,0	0/1:12,3:15:1.96:79,0,2	0/0:11,0:10:27.08:0,27,336	1/1:6,7:12:4.22:131,4,0	0/1:6,7:12:16.77:161,0,17	0/0:14,0:13:18.49:0,18,198	0/0:9,0:9:24.06:0,24,293	0/1:8,2:10:9.02:92,0,9	1/1:10,5:12:31.18:227,31,0	1/1:4,5:9:11.95:105,12,0	1/1:17,22:37:23.55:414,24,0	0/0:16,0:24:38.46:0,38,226	0/1:10,3:14:33.94:53,0,34	0/0:5,0:10:12.78:0,13,43	0/0:7,0:14:12.57:0,13,44	0/0:1,0:1:0:0,0,0	0/0:6,0:7:11.51:0,12,111	0/0:16,0:15:32.23:0,32,348	0/0:9,0:11:18.50:0,19,105	0/1:8,1:11:28.69:29,0,119	0/1:15,1:19:18.21:18,0,63	0/1:9,0:14:7.72:8,0,62
chr10	76310805	.	TTTCCCCTCTCTA	T	6777.43	PASS	AB=0.508;AC=17;AF=0.304;AN=56;BaseQRankSum=3.290;DP=512;FS=3.792;HRun=0;HaplotypeScore=195.3601;InbreedingCoeff=0.8904;MQ=88.47;MQ0=3;MQRankSum=-6.492;QD=49.47;ReadPosRankSum=-0.000;VQSLOD=4.4815;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,6252	0/0:3,0:3:9.03:0,9,265	0/0:36,0:27:74.75:0,75,2411	0/0:44,0:35:57.70:0,58,2856	1/1:0,13:13:24.05:757,24,0	0/0:9,0:9:27.09:0,27,1668	0/0:16,0:16:48.16:0,48,2243	0/0:14,0:14:39.13:0,39,1511	0/0:14,0:14:42.14:0,42,2176	0/0:20,0:20:57.19:0,57,2550	0/0:9,0:9:24.08:0,24,1311	0/0:12,0:12:36.12:0,36,1929	0/0:10,0:10:30.10:0,30,1638	0/0:19,0:19:57.18:0,57,2797	0/0:20,0:20:60.16:0,60,2885	0/0:16,0:16:48.15:0,48,2517	0/0:35,0:35:99:0,105,5693	1/1:0,9:9:12:375,12,0	1/1:0,11:11:29.91:307,30,0	1/1:0,16:16:39.03:1133,39,0	1/1:1,23:24:14.69:359,15,0	0/0:8,0:8:24.08:0,24,1285	0/0:14,0:14:42.08:0,42,1834	0/0:37,0:37:99:0,111,6192	1/1:0,9:9:15.05:487,15,0	0/1:1,30:31:99:2103,0,104	1/1:0,14:14:18.06:665,18,0	1/1:0,10:10:15.05:591,15,0
chr10	76311268	.	TTTG	T	2015.43	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=1.991;DP=631;FS=4.623;HRun=0;HaplotypeScore=145.8023;InbreedingCoeff=0.4770;MQ=64.26;MQ0=3;MQRankSum=3.288;QD=5.33;ReadPosRankSum=-4.200;VQSLOD=1.5387;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.79:0,97,1801	0/1:13,0:13:39.23:39,0,41	0/0:23,0:16:35.28:0,35,359	0/0:19,0:16:23.67:0,24,270	1/1:38,0:37:70.30:403,70,0	0/1:31,0:30:78.70:79,0,199	0/0:19,0:19:5.45:0,5,196	0/1:14,0:14:38.49:38,0,74	0/0:14,0:14:38.82:0,39,677	0/1:33,0:32:22.01:22,0,41	0/1:24,0:24:30.27:30,0,104	0/0:16,0:16:48.15:0,48,905	0/0:17,0:17:51.15:0,51,936	0/1:22,0:21:7.64:8,0,288	0/1:28,0:28:6.47:6,0,419	0/0:14,0:14:20.69:0,21,157	0/0:17,0:16:2.91:0,3,110	1/1:23,0:21:22.66:199,23,0	1/1:21,0:20:23.18:172,23,0	1/1:25,1:26:60.82:347,61,0	1/1:22,0:21:25.27:104,25,0	0/0:25,0:25:69.17:0,69,1276	0/0:27,0:27:81.15:0,81,1368	0/0:26,0:26:75.20:0,75,1361	1/1:20,2:22:46.84:272,47,0	1/1:21,0:20:41.57:190,42,0	1/1:19,0:19:29.38:124,29,0	1/1:20,1:20:36.35:187,36,0
chr10	76311269	.	TTG	T	7073.39	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=3.722;DP=624;FS=21.252;HRun=0;HaplotypeScore=115.5737;InbreedingCoeff=0.4838;MQ=62.97;MQ0=3;MQRankSum=4.743;QD=16.84;ReadPosRankSum=-3.932;VQSLOD=2.2894;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1496	0/1:13,0:13:0.72:57,0,1	0/0:22,0:15:38.60:0,39,362	0/0:19,0:16:37.82:0,38,331	1/1:12,24:35:98.36:1164,98,0	0/1:31,0:30:8.48:241,0,8	0/1:19,0:19:26.76:90,0,27	1/1:15,0:15:4.39:89,4,0	0/0:15,0:15:39.98:0,40,581	1/1:33,0:32:54.90:391,55,0	0/1:24,0:24:4.13:139,0,4	0/0:17,0:17:51.11:0,51,755	0/0:17,0:17:51.16:0,51,781	0/1:23,0:22:76.41:76,0,116	0/1:28,0:28:12.22:12,0,141	0/1:14,0:14:30.97:50,0,31	0/1:17,0:16:6.29:38,0,6	1/1:9,13:21:42.06:628,42,0	1/1:3,15:17:50.31:512,50,0	1/1:3,22:25:71.65:782,72,0	1/1:3,18:20:29.83:388,30,0	0/0:24,0:24:69.17:0,69,1051	0/0:27,0:27:81.20:0,81,1157	0/0:27,0:27:78.19:0,78,1165	1/1:5,17:22:59.63:740,60,0	1/1:1,20:20:54.97:646,55,0	1/1:4,14:18:33.11:459,33,0	1/1:3,17:19:44.86:574,45,0
chr10	76311270	.	TG	T	6664.29	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=11.307;DP=616;FS=4.375;HRun=1;HaplotypeScore=104.9203;InbreedingCoeff=0.9540;MQ=62.72;MQ0=3;MQRankSum=-0.984;QD=16.10;ReadPosRankSum=-2.986;VQSLOD=4.0390;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1184	1/1:13,0:13:16:128,16,0	0/0:22,0:15:36.83:0,37,303	0/0:18,0:15:1.15:0,1,193	1/1:35,1:35:97.13:681,97,0	1/1:29,2:30:72.10:535,72,0	1/1:19,0:19:26.65:286,27,0	1/1:14,2:16:35.09:268,35,0	0/0:15,0:15:14.06:0,14,433	1/1:29,2:30:72.40:638,72,0	1/1:23,0:23:35.84:276,36,0	0/0:17,0:17:50.16:0,50,590	0/0:17,0:17:51.13:0,51,617	1/1:22,1:22:12.54:215,13,0	1/1:26,1:27:55.17:318,55,0	1/1:14,0:14:29.94:247,30,0	1/1:17,0:16:37.16:237,37,0	1/1:16,4:18:49.76:360,50,0	1/1:17,1:17:50.16:381,50,0	1/1:23,1:24:71.22:499,71,0	1/1:18,3:20:29.70:221,30,0	0/0:23,0:23:69.09:0,69,836	0/0:27,0:27:81.19:0,81,964	0/0:28,0:28:81.16:0,81,964	1/1:19,3:22:59.34:437,59,0	1/1:20,1:20:56.50:406,56,0	1/1:14,4:18:32.61:219,33,0	1/1:19,1:19:44.43:313,44,0
chr10	76311613	.	TCAACAA	T	4050.35	PASS	AB=0.621;AC=17;AF=0.304;AN=56;BaseQRankSum=11.297;DP=526;FS=2.285;HRun=0;HaplotypeScore=108.3902;InbreedingCoeff=0.8771;MQ=67.54;MQ0=2;MQRankSum=-8.646;QD=29.35;ReadPosRankSum=1.526;VQSLOD=3.1443;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:69.12:0,69,1786	0/0:7,0:7:12.04:0,12,334	0/0:21,0:17:11.98:0,12,228	0/0:25,0:23:27.07:0,27,572	1/1:4,15:18:30.06:527,30,0	0/0:31,0:31:63.20:0,63,1983	0/0:18,0:18:33.10:0,33,987	0/0:21,0:21:33.11:0,33,869	0/0:16,0:15:33.11:0,33,1010	0/0:19,0:19:45.14:0,45,1232	0/0:17,0:17:39.13:0,39,1008	0/0:19,0:19:30.10:0,30,922	0/0:13,0:13:36.12:0,36,1097	0/0:19,0:19:42.14:0,42,1356	0/0:22,0:23:51.11:0,51,1591	0/0:26,0:26:57.17:0,57,1711	0/0:20,0:20:45.06:0,45,1315	1/1:3,7:10:15.05:311,15,0	1/1:8,4:12:12.04:237,12,0	1/1:4,13:17:21.07:380,21,0	1/1:7,7:14:6.02:124,6,0	0/0:20,0:20:42.11:0,42,1201	0/0:18,0:17:30.10:0,30,980	0/0:26,0:26:49.72:0,50,1545	1/1:5,10:15:18.06:374,18,0	0/1:7,11:17:65.30:460,0,65	1/1:1,25:26:60.21:1245,60,0	1/1:1,6:7:21.02:392,21,0
chr10	76311968	.	TCACACACACACACACA	T	12310.54	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=8.654;DP=691;FS=8.420;HRun=0;HaplotypeScore=278.3281;InbreedingCoeff=0.9441;MQ=55.43;MQ0=23;MQRankSum=-12.342;QD=62.49;ReadPosRankSum=2.495;VQSLOD=3.2842;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:55:99:0,105,6921	1/1:4,1:5:3.01:134,3,0	0/0:51,0:25:33.11:0,33,1820	0/0:57,0:19:16.85:0,17,569	0/0:11,0:19:11.25:0,11,459	1/1:3,18:20:48.16:2139,48,0	1/1:10,17:27:42.14:1871,42,0	1/1:14,2:16:6.02:185,6,0	0/0:23,0:24:54.19:0,54,3972	1/1:8,14:22:39.13:1598,39,0	1/1:11,10:21:18.06:682,18,0	0/0:32,0:35:72.25:0,72,5158	0/0:23,0:23:48.16:0,48,3529	1/1:7,10:18:30.10:1291,30,0	1/1:3,13:16:39.13:1738,39,0	1/1:8,13:21:33.11:1470,33,0	1/1:18,11:29:27.09:1203,27,0	0/0:7,0:14:36.08:0,36,1434	0/0:13,0:20:39.13:0,39,1639	0/0:6,0:11:15.05:0,15,609	0/0:18,0:29:42.14:0,42,1855	0/0:22,0:22:45.15:0,45,2663	0/0:22,0:22:45.15:0,45,2555	0/0:34,0:40:84.29:0,84,5796	0/0:5,0:13:21.07:0,21,931	0/0:12,0:23:49.41:0,49,2212	0/0:9,0:22:39.13:0,39,1619	0/0:9,0:9:15.05:0,15,569
chr10	76313523	.	A	AGG	4986.30	PASS	AB=1.000;AC=34;AF=0.630;AN=54;BaseQRankSum=3.444;DP=514;FS=1.636;HRun=2;HaplotypeScore=116.7909;InbreedingCoeff=0.7286;MQ=65.23;MQ0=25;MQRankSum=-3.111;QD=15.16;ReadPosRankSum=3.295;VQSLOD=2.4482;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:70.03:0,70,905	1/1:5,0:5:5.44:37,5,0	0/0:39,0:9:15.02:0,15,179	0/0:27,0:9:3.48:0,3,144	1/1:25,0:24:61.35:661,61,0	1/1:12,0:11:7.21:18,7,0	0/1:25,0:25:6.12:32,0,6	1/1:28,0:28:12.58:85,13,0	0/0:16,0:15:28.83:0,29,351	0/1:24,0:22:1.87:21,0,2	1/1:18,0:17:1.74:12,2,0	0/0:15,0:15:32.97:0,33,436	0/0:15,0:14:16.87:0,17,206	1/1:11,0:10:1.73:5,2,0	1/1:17,0:17:7.28:36,7,0	1/1:17,0:16:2.96:26,3,0	1/1:25,0:25:22.37:147,22,0	1/1:13,0:13:36.01:472,36,0	1/1:2,9:9:23.90:325,24,0	1/1:22,0:21:37.20:675,37,0	1/1:14,0:14:32.45:427,32,0	0/0:7,0:7:12.04:0,12,165	0/0:15,0:15:30.55:0,31,404	0/0:15,0:15:30.86:0,31,370	1/1:18,0:17:41.32:456,41,0	1/1:27,0:26:72.55:980,73,0	1/1:17,0:16:45.09:572,45,0	./.
chr10	76314526	.	T	TGTTG	15855.74	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-12.404;DP=709;FS=2.584;HRun=0;HaplotypeScore=109.8821;InbreedingCoeff=0.9938;MQ=85.66;MQ0=0;MQRankSum=-9.449;QD=62.92;ReadPosRankSum=-0.702;VQSLOD=6.7491;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,2083	1/1:2,7:9:24.08:616,24,0	0/0:26,0:26:63.21:0,63,1155	0/0:31,0:31:62.26:0,62,1213	0/0:26,0:26:72.25:0,72,1343	1/1:6,17:26:63.21:1500,63,0	1/1:6,31:40:93.32:2337,93,0	1/1:14,21:36:90.31:2237,90,0	0/0:36,0:36:99:0,108,1976	1/1:5,8:14:36.11:828,36,0	1/1:1,8:9:18.06:435,18,0	0/0:32,0:32:90.31:0,90,1659	0/0:23,0:23:66.23:0,66,1232	1/1:3,27:30:78.27:2065,78,0	1/1:5,30:36:96.33:2421,96,0	1/1:2,15:18:42.14:1119,42,0	1/1:3,31:34:37.56:2297,38,0	0/0:14,0:14:42.14:0,42,784	0/0:14,0:14:36.11:0,36,631	0/0:17,0:17:42.14:0,42,783	0/0:52,0:52:99:0,141,2573	0/0:17,0:17:45.14:0,45,808	0/0:14,0:14:33.10:0,33,584	0/0:34,0:34:90.25:0,90,1612	0/0:15,0:15:33.10:0,33,569	0/0:25,0:25:69.24:0,69,1259	0/0:33,0:33:78.24:0,78,1360	0/0:8,0:8:12.04:0,12,218
chr10	76316581	.	GA	G	2388.40	PASS	AB=0.840;AC=19;AF=0.339;AN=56;BaseQRankSum=2.322;DP=628;FS=9.310;HRun=13;HaplotypeScore=81.7517;InbreedingCoeff=0.8549;MQ=74.92;MQ0=2;MQRankSum=-0.375;QD=11.82;ReadPosRankSum=2.720;VQSLOD=3.0806;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:38:77.88:0,78,718	0/0:5,0:5:9.01:0,9,85	0/0:25,0:19:11.34:0,11,139	0/0:19,0:15:6.83:0,7,76	1/1:6,19:26:49.72:356,50,0	0/0:20,2:25:5.96:0,6,492	0/1:16,4:20:20.66:21,0,305	0/0:26,2:28:26.25:0,26,444	0/0:7,0:23:49.42:0,49,254	0/0:35,0:37:74.11:0,74,735	0/0:17,0:18:40.05:0,40,349	0/0:5,0:25:48.56:0,49,257	0/0:6,0:23:36.92:0,37,193	0/0:22,0:21:47.99:0,48,439	0/0:16,0:17:41.90:0,42,393	0/0:25,1:26:40.93:0,41,528	0/0:24,0:26:54.63:0,55,540	1/1:3,10:13:26.80:197,27,0	1/1:5,14:19:15.89:277,16,0	1/1:6,15:21:12.56:255,13,0	1/1:6,20:26:26.49:326,26,0	0/0:6,0:16:31.76:0,32,187	0/0:10,0:24:35.82:0,36,212	0/0:10,0:29:51.51:0,52,330	1/1:2,15:17:38.76:284,39,0	1/1:7,20:27:50.65:372,51,0	1/1:5,23:29:64.66:465,65,0	1/1:1,2:3:5.96:44,6,0
chr10	76316680	.	CAGACACACAG	C	3979.47	PASS	AB=0.988;AC=26;AF=0.481;AN=54;BaseQRankSum=3.153;DP=647;FS=6.535;HRun=0;HaplotypeScore=183.4825;InbreedingCoeff=0.3439;MQ=50.16;MQ0=31;MQRankSum=0.072;QD=10.34;ReadPosRankSum=-3.567;VQSLOD=1.1447;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:41:77.69:0,78,2938	0/1:11,0:11:25.11:25,0,468	1/1:10,0:3:2.04:6,2,0	0/1:15,0:3:5.53:6,0,63	./.	0/0:27,0:27:33.74:0,34,592	0/1:25,0:23:8.59:9,0,417	0/1:44,0:33:97.56:98,0,820	0/0:17,0:17:44.36:0,44,1358	0/1:44,0:33:3.67:4,0,1500	0/0:18,0:17:32.34:0,32,545	0/0:29,0:29:78.25:0,78,2374	0/0:20,0:19:54.12:0,54,1681	0/1:27,0:27:19.36:19,0,710	0/1:26,0:26:37.41:37,0,953	0/0:21,0:21:2.02:0,2,877	0/1:35,0:35:86.89:87,0,1568	1/1:2,15:17:4.55:374,5,0	1/1:1,16:17:15.80:667,16,0	1/1:12,0:13:18.51:284,19,0	1/1:45,0:42:63.14:944,63,0	0/0:14,0:13:30.01:0,30,555	0/0:22,0:19:53.37:0,53,1345	0/0:44,0:43:99:0,102,3605	1/1:11,0:11:12.63:144,13,0	1/1:5,0:12:15.99:314,16,0	1/1:14,4:19:50.91:861,51,0	1/1:1,5:5:3.01:101,3,0
chr10	76316688	.	CAG	C	1937.94	PASS	AB=0.961;AC=23;AF=0.426;AN=54;BaseQRankSum=7.283;DP=640;FS=4.360;HRun=0;HaplotypeScore=115.1033;InbreedingCoeff=0.2668;MQ=50.56;MQ0=32;MQRankSum=-0.707;QD=5.32;ReadPosRankSum=-1.372;VQSLOD=2.6328;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:39:70.87:0,71,1157	0/1:10,0:10:20.89:21,0,122	0/1:10,0:2:1.44:1,0,4	0/0:17,0:2:5.05:0,5,56	./.	0/0:22,0:22:27.27:0,27,198	0/0:22,1:21:15.08:0,15,188	0/1:46,2:37:99:165,0,345	0/0:18,0:18:31.25:0,31,525	0/1:42,0:31:67.32:67,0,447	0/0:18,0:17:23.36:0,23,203	0/0:30,0:30:55.36:0,55,1046	0/0:20,0:19:39.17:0,39,737	0/1:29,1:29:58.17:58,0,251	0/1:21,3:24:79.92:80,0,359	0/1:17,2:19:49.59:50,0,289	0/1:34,3:37:99:151,0,431	1/1:17,0:17:3.90:70,4,0	1/1:19,0:19:4.81:308,5,0	1/1:11,0:11:11.99:115,12,0	1/1:47,0:43:65.86:548,66,0	0/0:13,0:12:13.92:0,14,198	0/0:22,1:20:45.56:0,46,596	0/0:44,0:43:86.58:0,87,1476	1/1:10,0:10:6.63:52,7,0	0/1:16,0:12:4.14:118,0,4	1/1:17,1:17:37.60:292,38,0	1/1:6,0:5:2.97:20,3,0
chr10	76316690	.	GAC	G	109.42	PASS	AB=0.987;AC=17;AF=0.315;AN=54;BaseQRankSum=6.377;DP=643;FS=0.723;HRun=0;HaplotypeScore=122.2243;InbreedingCoeff=-0.1704;MQ=52.63;MQ0=32;MQRankSum=-0.789;QD=0.30;ReadPosRankSum=2.234;VQSLOD=2.2033;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:37:51.15:0,51,744	0/0:10,0:10:6.71:0,7,66	0/0:12,0:3:7.79:0,8,37	0/0:20,0:5:8.35:0,8,91	./.	0/0:22,0:22:18.51:0,19,247	0/0:23,0:21:11.38:0,11,111	0/1:46,0:35:25.33:25,0,155	0/1:19,1:20:5.18:5,0,320	0/0:42,0:31:34.21:0,34,299	0/1:17,0:16:0.03:0,0,0	0/0:28,3:31:19.12:0,19,696	0/0:19,1:19:4.49:0,4,523	0/1:29,0:28:7.49:7,0,100	0/1:26,0:26:36.45:36,0,211	0/1:19,0:19:15.35:15,0,269	0/1:37,0:37:46.39:46,0,274	0/1:19,0:19:9.63:10,0,31	0/1:19,0:19:19.38:19,0,28	1/1:11,0:11:2.78:18,3,0	0/1:48,0:44:9.89:10,0,20	0/1:11,1:11:28.63:29,0,41	0/0:23,0:20:29.98:0,30,410	0/1:40,2:41:0.07:0,0,911	0/0:9,0:9:2.99:0,3,24	0/0:17,0:13:5.45:0,5,47	0/1:17,0:16:21.77:22,0,32	1/1:6,0:5:1.25:3,1,0
chr10	76316967	.	ATGATGATGTCT	A	10260.42	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.031;DP=633;FS=2.280;HRun=0;HaplotypeScore=207.7881;InbreedingCoeff=0.9778;MQ=80.76;MQ0=0;MQRankSum=-15.352;QD=65.77;ReadPosRankSum=1.626;VQSLOD=4.8720;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,6878	0/0:11,0:11:30.07:0,30,1295	0/0:21,0:21:51.15:0,51,2423	0/0:24,0:24:62.58:0,63,2651	1/1:3,9:12:20.98:478,21,0	0/0:27,0:27:75.26:0,75,3747	0/0:32,0:32:90.29:0,90,4870	0/0:23,0:23:57.20:0,57,2849	0/0:22,0:22:60.17:0,60,2953	0/0:27,0:27:78.27:0,78,4202	0/0:16,0:16:36.12:0,36,1896	0/0:25,0:25:66.20:0,66,3231	0/0:11,0:11:30.10:0,30,1688	0/0:36,0:36:99:0,99,5185	0/0:23,0:23:60.21:0,60,3140	0/0:19,0:19:48.15:0,48,2535	0/0:51,0:51:99:0,151,8101	1/1:5,25:30:66.18:2179,66,0	1/1:3,2:5:6.02:157,6,0	1/1:1,18:18:51.05:1424,51,0	1/1:8,24:32:35.77:939,36,0	0/0:13,0:13:39.13:0,39,2010	0/0:18,0:18:39.13:0,39,2066	0/0:33,0:33:84.29:0,84,4472	1/1:1,17:16:48.16:1634,48,0	1/1:5,16:21:48.16:1598,48,0	1/1:1,14:15:42.14:1439,42,0	1/1:0,4:4:12.04:411,12,0
chr10	76318596	.	AT	A	609.96	PASS	AB=0.890;AC=19;AF=0.380;AN=50;BaseQRankSum=0.602;DP=152;FS=6.753;HRun=1;HaplotypeScore=33.2597;InbreedingCoeff=0.4538;MQ=55.24;MQ0=4;MQRankSum=-3.521;QD=7.35;ReadPosRankSum=-2.579;VQSLOD=-0.4744;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,2:23:25.12:130,0,25	1/1:2,0:2:5.95:42,6,0	0/0:9,0:4:6.01:0,6,82	0/0:5,0:2:5.75:0,6,30	0/1:2,0:2:8.64:15,0,9	0/1:2,1:3:12.50:21,0,13	1/1:1,4:5:14.89:108,15,0	1/1:4,10:13:26.52:168,27,0	0/0:2,0:2:6.02:0,6,85	1/1:2,3:5:3.82:35,4,0	1/1:1,2:3:8.66:59,9,0	0/0:1,0:1:3.01:0,3,43	./.	1/1:1,2:3:5.93:40,6,0	0/0:1,0:1:2.04:0,2,6	1/1:1,2:3:2.96:31,3,0	1/1:10,10:15:16.48:127,16,0	0/0:12,0:11:13.96:0,14,48	0/0:8,0:8:8.11:0,8,31	./.	0/0:2,0:2:4.63:0,5,16	./.	0/0:2,0:2:6.01:0,6,70	0/0:6,0:6:12.03:0,12,156	0/0:8,0:7:14:0,14,73	0/0:2,0:2:5.02:0,5,20	0/0:6,0:6:10.67:0,11,37	0/0:2,0:1:2.74:0,3,12
chr10	76318645	.	TGA	T	625.17	PASS	AC=14;AF=0.304;AN=46;BaseQRankSum=0.528;DP=136;FS=1.039;HRun=0;HaplotypeScore=25.1657;InbreedingCoeff=0.6266;MQ=78.06;MQ0=2;MQRankSum=-0.183;QD=22.33;ReadPosRankSum=1.639;VQSLOD=3.3162;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:18.06:0,18,263	0/0:2,0:2:6.02:0,6,98	0/0:9,0:5:12.48:0,12,142	0/0:12,0:7:12.24:0,12,145	./.	0/0:2,0:2:6.02:0,6,93	./.	0/0:16,0:16:45.15:0,45,744	0/0:3,0:3:2.98:0,3,22	0/0:3,0:3:9.02:0,9,133	0/0:7,0:7:12.04:0,12,198	0/0:4,0:4:5.91:0,6,56	0/0:4,0:4:5.98:0,6,69	./.	0/0:5,0:5:6.02:0,6,96	./.	0/0:11,0:11:12.04:0,12,185	1/1:10,3:12:25.01:318,25,0	1/1:2,0:2:3.01:44,3,0	1/1:2,0:2:6.02:83,6,0	1/1:1,0:1:3.01:42,3,0	0/0:2,0:2:6.02:0,6,99	0/0:4,0:4:8.86:0,9,113	0/0:3,0:3:2.97:0,3,20	./.	1/1:0,3:3:9.03:118,9,0	1/1:0,4:4:3.01:38,3,0	1/1:3,0:3:9.03:132,9,0
chr10	76320624	.	CCCA	C	1154.04	PASS	AB=0.971;AC=21;AF=0.375;AN=56;BaseQRankSum=6.290;DP=296;FS=42.831;HRun=0;HaplotypeScore=57.2948;InbreedingCoeff=-0.5188;MQ=32.65;MQ0=19;MQRankSum=-3.609;QD=5.58;ReadPosRankSum=1.477;VQSLOD=0.5064;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:19:33.02:0,33,377	0/1:10,0:8:48.01:48,0,87	0/0:14,0:1:0:0,0,0	0/0:17,0:2:3.01:0,3,43	0/0:9,0:9:6.12:0,6,163	0/1:8,0:6:18.16:18,0,72	0/1:7,0:5:13.59:14,0,80	0/1:8,0:8:44.76:45,0,160	1/1:4,2:4:11.89:117,12,0	0/0:13,0:11:29.35:0,29,353	0/1:6,0:5:21.95:22,0,73	0/0:8,0:6:4.98:0,5,121	0/1:6,0:3:26.33:33,0,26	0/1:8,0:8:87.68:88,0,103	0/1:10,0:10:31.65:108,0,32	0/1:15,0:12:99:145,0,111	0/1:19,0:16:99:106,0,215	0/1:9,0:11:53.32:53,0,79	0/1:10,0:5:25.13:41,0,25	0/1:6,0:6:32.09:32,0,56	0/0:2,0:2:3.01:0,3,35	0/0:3,0:2:6.02:0,6,70	0/1:8,0:6:25.09:25,0,66	0/1:12,0:10:28.72:29,0,131	0/1:10,2:12:40.54:158,0,41	0/1:14,0:9:34.33:34,0,143	0/1:18,1:15:73.94:74,0,185	0/1:9,2:10:71.12:118,0,71
chr10	76320625	.	CCAAAA	C	719.57	PASS	AB=0.923;AC=14;AF=0.250;AN=56;BaseQRankSum=4.180;DP=292;FS=31.658;HRun=0;HaplotypeScore=65.5840;InbreedingCoeff=-0.2570;MQ=32.09;MQ0=21;MQRankSum=-2.197;QD=5.58;ReadPosRankSum=1.227;VQSLOD=0.1713;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:18:31.23:0,31,482	0/1:10,0:8:21.42:71,0,21	0/0:14,0:1:3.01:0,3,35	0/0:18,0:3:2.95:0,3,44	0/0:9,0:9:6.10:0,6,78	0/1:8,0:6:25.12:25,0,27	0/1:5,0:4:13.41:13,0,37	0/1:7,1:8:47.79:48,0,72	0/0:9,0:6:15.75:0,16,161	0/0:13,0:11:22.06:0,22,179	0/1:6,0:5:31.86:37,0,32	0/0:8,0:6:14.76:0,15,102	0/0:6,0:3:8.84:0,9,73	0/1:8,0:8:35.89:72,0,36	1/1:6,2:8:1.86:166,2,0	0/1:12,2:11:44.57:220,0,45	0/1:16,1:15:99:124,0,125	0/1:12,0:11:15.30:15,0,89	0/0:8,0:4:11.56:0,12,92	0/1:5,1:6:22.42:22,0,73	0/0:1,0:2:2.96:0,3,19	0/0:3,0:2:5.88:0,6,36	0/0:8,0:6:17.12:0,17,151	0/0:12,0:9:12.16:0,12,140	0/1:9,0:11:48.49:48,0,65	0/1:12,0:8:3.90:4,0,95	0/0:18,0:15:12.94:0,13,159	0/0:10,0:10:9.99:0,10,73
chr10	76320642	.	A	AAG	40.09	PASS	AB=0.790;AC=2;AF=0.036;AN=56;BaseQRankSum=-0.236;DP=388;FS=22.851;HRun=0;HaplotypeScore=73.3475;InbreedingCoeff=-0.0581;MQ=33.94;MQ0=39;MQRankSum=1.503;QD=0.59;ReadPosRankSum=0.599;VQSLOD=-0.6340;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,17:26:27.99:114,0,28	0/0:9,0:5:9.88:0,10,57	0/1:39,0:7:6.34:6,0,29	0/0:45,0:6:8.69:0,9,70	0/0:8,0:7:13.66:0,14,72	0/0:8,0:5:4.94:0,5,54	0/0:5,0:4:8.92:0,9,63	0/0:10,0:10:21.82:0,22,174	0/0:11,0:7:20.47:0,20,163	0/0:20,0:13:28.35:0,28,217	0/0:12,0:10:19.23:0,19,122	0/0:8,0:6:11.97:0,12,104	0/0:8,0:4:11.74:0,12,84	0/0:7,0:7:20.66:0,21,143	0/0:13,0:12:27.77:0,28,179	0/0:13,0:10:25.67:0,26,156	0/0:16,0:13:24.38:0,24,154	0/0:12,0:10:23.85:0,24,200	0/0:15,0:8:17.96:0,18,154	0/0:9,0:6:17.25:0,17,127	0/0:3,0:2:2.97:0,3,20	0/0:3,0:1:2.99:0,3,24	0/0:13,0:11:26.82:0,27,223	0/0:9,0:6:8.88:0,9,90	0/0:14,0:12:30.31:0,30,231	0/0:21,0:13:33.58:0,34,269	0/0:18,0:15:36.02:0,36,254	0/0:10,0:9:17.55:0,18,132
chr10	76320678	.	AAAGTCC	A	5378.74	PASS	AB=0.806;AC=36;AF=0.667;AN=54;BaseQRankSum=3.518;DP=280;FS=45.183;HRun=0;HaplotypeScore=69.4732;InbreedingCoeff=0.6319;MQ=73.71;MQ0=6;MQRankSum=-5.630;QD=27.87;ReadPosRankSum=0.876;VQSLOD=2.4419;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:21.07:0,21,678	1/1:3,1:3:3.01:68,3,0	0/0:27,0:19:15.12:0,15,535	0/1:36,0:14:8.39:8,0,251	1/1:2,2:4:12.04:257,12,0	1/1:2,4:4:9.03:205,9,0	1/1:0,3:3:9.03:203,9,0	1/1:3,6:4:3:26,3,0	0/0:8,0:6:18.06:0,18,627	1/1:2,12:10:27.08:572,27,0	1/1:5,4:9:18.05:355,18,0	0/0:6,0:5:15.05:0,15,522	0/0:10,0:7:18.03:0,18,543	1/1:1,2:3:6.02:136,6,0	1/1:2,8:9:21.07:478,21,0	1/1:3,6:8:18.06:410,18,0	1/1:3,12:12:3.01:68,3,0	1/1:3,1:3:3.01:69,3,0	1/1:5,9:9:18:294,18,0	1/1:5,7:12:30.10:657,30,0	./.	0/0:1,0:1:3.01:0,3,105	0/0:12,0:12:36.03:0,36,949	0/0:2,1:2:6.02:0,6,205	1/1:2,11:12:27.09:616,27,0	0/1:4,7:9:77.37:410,0,77	1/1:3,8:7:18.06:410,18,0	1/1:2,2:4:6.02:136,6,0
chr10	76320683	.	CCAAGT	C	2280.83	PASS	AB=1.000;AC=35;AF=0.648;AN=54;BaseQRankSum=5.655;DP=256;FS=70.091;HRun=0;HaplotypeScore=70.6393;InbreedingCoeff=0.5553;MQ=78.02;MQ0=3;MQRankSum=-6.889;QD=13.50;ReadPosRankSum=2.645;VQSLOD=-0.0213;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:27.09:0,27,729	0/1:3,0:3:26.43:26,0,30	0/0:27,0:16:34.59:0,35,629	0/1:32,0:16:27.98:28,0,337	1/1:4,0:4:11.99:127,12,0	1/1:6,0:4:9.02:97,9,0	1/1:3,0:3:9.02:95,9,0	1/1:7,0:2:0.47:1,0,0	0/0:9,0:7:21.07:0,21,678	1/1:13,1:10:14.75:249,15,0	1/1:6,1:7:17.94:168,18,0	0/0:6,0:5:15.05:0,15,485	0/0:9,0:6:18.03:0,18,506	1/1:2,0:2:6.02:65,6,0	1/1:8,0:7:21.05:227,21,0	1/1:6,2:7:18.05:202,18,0	1/1:15,0:12:3.01:32,3,0	1/1:3,0:2:3.01:33,3,0	1/1:12,0:7:2.58:93,3,0	1/1:9,1:10:30.04:316,30,0	./.	0/0:1,0:1:3.01:0,3,97	0/0:12,0:12:36.04:0,36,948	0/0:3,0:2:6.02:0,6,193	1/1:11,1:11:27.07:295,27,0	0/1:11,0:9:86.90:152,0,87	1/1:10,0:7:18.05:195,18,0	1/1:2,0:2:6.02:65,6,0
chr10	76321020	.	TTC	T	565.43	PASS	AB=0.978;AC=23;AF=0.426;AN=54;BaseQRankSum=-2.267;DP=353;FS=0.000;HRun=0;HaplotypeScore=39.7011;InbreedingCoeff=-0.0107;MQ=31.60;MQ0=71;MQRankSum=-0.656;QD=2.21;ReadPosRankSum=-5.336;VQSLOD=-0.2979;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,1:13:0.70:52,0,1	1/1:2,0:2:1.55:4,2,0	./.	0/0:20,0:5:5.89:0,6,26	0/1:12,0:10:9.53:20,0,10	1/1:25,0:16:4.97:37,5,0	0/0:3,0:3:5.34:0,5,24	0/1:12,1:9:8.76:88,0,9	0/0:8,0:6:11.75:0,12,91	0/1:15,0:13:2.50:64,0,3	0/1:5,0:3:8:11,0,8	0/0:13,0:10:20.57:0,21,232	0/0:12,0:9:9.56:0,10,159	1/1:9,0:5:11.79:75,12,0	0/1:16,0:9:6.58:7,0,32	0/1:12,0:6:7.86:29,0,8	0/1:21,1:14:4.09:34,0,4	0/1:15,2:12:3.45:57,0,3	0/1:14,0:6:0.84:36,0,1	0/1:11,0:11:11.19:11,0,82	1/1:5,0:3:1.25:3,1,0	0/0:7,0:5:12.03:0,12,155	0/0:10,0:9:17.69:0,18,212	0/0:10,0:1:3:0,3,28	0/1:9,0:8:34.59:35,0,43	0/1:17,1:9:45.44:45,0,54	0/1:27,0:17:1.89:94,0,2	0/1:5,0:4:3.37:12,0,3
chr10	76321021	.	TC	T	1410.09	PASS	AC=40;AF=0.741;AN=54;BaseQRankSum=-0.993;DP=348;FS=1.231;HRun=1;HaplotypeScore=34.7590;InbreedingCoeff=0.6881;MQ=31.77;MQ0=69;MQRankSum=0.513;QD=5.51;ReadPosRankSum=-3.079;VQSLOD=-0.5476;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:12:21.14:125,21,0	1/1:2,0:2:1.25:3,1,0	./.	0/0:19,0:5:5.14:0,5,24	1/1:12,0:10:4.29:33,4,0	1/1:24,1:16:8.67:52,9,0	1/1:3,0:3:2.92:8,3,0	1/1:13,0:9:7.58:92,8,0	0/0:8,0:6:6.39:0,6,48	1/1:14,1:13:31.91:233,32,0	1/1:4,1:3:6.86:60,7,0	0/0:13,0:10:20.58:0,21,186	0/0:12,0:9:13.85:0,14,133	1/1:8,1:5:11.50:66,12,0	1/1:15,1:9:13.26:94,13,0	1/1:9,3:6:7.04:44,7,0	1/1:21,1:14:9.62:56,10,0	1/1:14,2:11:8.66:88,9,0	1/1:12,1:6:13.21:113,13,0	1/1:10,1:11:8.48:94,8,0	1/1:5,0:3:1.25:3,1,0	0/0:7,0:5:12.02:0,12,124	0/0:10,0:9:17.65:0,18,166	0/0:10,0:1:3.01:0,3,33	1/1:8,1:8:5.63:73,6,0	1/1:18,0:9:13.69:72,14,0	1/1:22,5:17:25.61:228,26,0	1/1:4,1:4:7.19:47,7,0
chr10	76321453	.	G	GAA	4289.91	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-2.880;DP=625;FS=0.000;HRun=12;HaplotypeScore=82.5094;InbreedingCoeff=0.9576;MQ=66.32;MQ0=9;MQRankSum=-2.132;QD=21.34;ReadPosRankSum=-2.553;VQSLOD=3.8109;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:30:50.20:0,50,524	0/0:9,0:9:11.95:0,12,104	0/0:38,0:21:25.82:0,26,158	0/0:31,0:17:1.95:0,2,81	1/1:4,17:23:50.60:642,51,0	0/0:24,0:24:69:0,69,628	0/0:15,0:19:41.10:0,41,378	0/0:24,0:26:56.57:0,57,558	0/0:14,0:18:29.29:0,29,286	0/0:24,0:26:62.51:0,63,550	0/0:21,0:22:40.99:0,41,401	0/0:14,0:17:35.37:0,35,348	0/0:12,0:12:29.98:0,30,277	0/0:18,0:21:49.95:0,50,415	0/0:21,0:23:59.51:0,60,523	0/0:18,0:19:44.90:0,45,461	0/0:22,0:28:70.76:0,71,587	1/1:5,13:20:29.13:401,29,0	1/1:10,19:31:63.05:769,63,0	1/1:8,16:28:56.65:625,57,0	1/1:4,3:7:15.03:177,15,0	0/0:17,0:19:41.27:0,41,343	0/0:25,0:25:59.91:0,60,547	0/0:14,0:14:22.82:0,23,243	1/1:3,15:21:15.54:266,16,0	1/1:8,18:31:59.79:624,60,0	1/1:4,17:22:36.12:491,36,0	1/1:2,13:16:23.94:294,24,0
chr10	76327037	.	CTT	C	5238.03	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-1.669;DP=470;FS=1.591;HRun=15;HaplotypeScore=63.3644;InbreedingCoeff=0.8840;MQ=72.46;MQ0=3;MQRankSum=-1.076;QD=15.36;ReadPosRankSum=3.978;VQSLOD=4.1084;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,1:26:13.01:0,13,159	1/1:2,9:11:17.80:203,18,0	0/0:27,0:16:13.01:0,13,251	0/0:14,0:11:18.39:0,18,148	1/1:6,20:26:44.74:386,45,0	1/1:4,16:21:35.83:361,36,0	1/1:0,11:11:24:211,24,0	1/1:10,27:36:63.82:590,64,0	0/0:17,0:18:45.02:0,45,508	1/1:6,13:21:35.13:343,35,0	1/1:2,11:13:23.90:211,24,0	0/0:11,1:12:28.19:0,28,278	0/0:9,0:9:21.05:0,21,267	1/1:2,6:8:10.70:103,11,0	1/1:3,12:16:26.68:223,27,0	1/1:5,4:11:1.27:54,1,0	1/1:7,26:36:74.13:614,74,0	1/1:3,17:23:38.19:300,38,0	1/1:4,10:16:38.18:294,38,0	1/1:1,10:12:29.55:238,30,0	1/1:4,6:11:8.14:78,8,0	0/0:8,0:8:8.70:0,9,91	0/0:12,0:12:8.89:0,9,198	0/0:2,0:2:3.01:0,3,40	1/1:5,16:21:28.18:257,28,0	1/1:3,14:18:32.79:335,33,0	1/1:6,11:18:28.39:295,28,0	1/1:2,6:8:11.81:143,12,0
chr10	76328807	.	CGG	C	4645.53	PASS	AB=0.786;AC=20;AF=0.357;AN=56;BaseQRankSum=-3.093;DP=597;FS=1.223;HRun=8;HaplotypeScore=86.0418;InbreedingCoeff=0.8759;MQ=58.26;MQ0=23;MQRankSum=0.370;QD=20.56;ReadPosRankSum=2.103;VQSLOD=3.5979;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:98.96:0,99,1338	1/1:2,5:6:12.04:146,12,0	0/1:26,0:9:1.76:2,0,214	0/0:22,0:6:13.80:0,14,155	0/0:23,0:22:43.39:0,43,492	1/1:4,20:23:51.12:589,51,0	1/1:8,14:22:39.09:451,39,0	1/1:3,13:16:39.11:472,39,0	0/0:23,0:23:66.21:0,66,1025	1/1:7,22:27:60.16:718,60,0	1/1:1,13:14:27.08:328,27,0	0/0:18,0:19:53.67:0,54,822	0/0:14,0:14:39.12:0,39,629	0/1:5,15:20:8.48:422,0,8	1/1:1,16:16:30.09:362,30,0	1/1:9,7:14:39.04:424,39,0	1/1:8,25:29:60.18:731,60,0	0/0:19,0:20:29.78:0,30,360	0/0:16,0:16:29.22:0,29,250	0/0:23,0:23:44.02:0,44,495	0/0:30,0:29:52.19:0,52,570	0/0:22,0:20:48.14:0,48,740	0/0:14,0:14:33.07:0,33,522	0/0:18,0:20:44.64:0,45,712	0/0:13,0:13:23.71:0,24,287	0/0:24,0:24:42.17:0,42,393	0/0:23,0:23:46.36:0,46,521	0/0:17,0:17:47.44:0,47,481
chr10	76328813	.	GGGA	G	869.92	PASS	AB=0.960;AC=11;AF=0.196;AN=56;BaseQRankSum=10.579;DP=605;FS=0.365;HRun=0;HaplotypeScore=114.5714;InbreedingCoeff=0.1308;MQ=63.38;MQ0=22;MQRankSum=0.981;QD=4.60;ReadPosRankSum=3.921;VQSLOD=2.2859;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:99:0,110,1020	0/1:8,0:7:2.55:3,0,47	0/0:32,0:14:12.56:0,13,409	0/0:25,0:8:10.26:0,10,183	0/0:23,0:23:52.39:0,52,719	0/1:22,3:24:9.86:169,0,10	0/1:17,1:18:10.86:75,0,11	0/1:19,0:19:58.99:95,0,59	0/0:24,0:24:69.19:0,69,1369	0/1:25,1:25:53.18:172,0,53	0/1:13,0:13:3.82:46,0,4	0/0:21,0:21:60.15:0,60,1088	0/0:14,0:14:42.13:0,42,893	0/1:18,1:19:58.48:74,0,58	0/1:17,0:16:8.84:46,0,9	0/1:13,2:14:5.38:226,0,5	1/1:29,0:25:22.89:114,23,0	0/0:18,0:18:44.35:0,44,582	0/0:21,0:19:48.87:0,49,485	0/0:26,0:26:68.66:0,69,844	0/0:28,0:27:61.90:0,62,863	0/0:22,0:20:54.14:0,54,1064	0/0:14,0:14:42.02:0,42,758	0/0:18,0:18:45.15:0,45,984	0/0:16,0:16:44.23:0,44,496	0/0:24,0:24:56.34:0,56,655	0/0:23,0:23:58.16:0,58,775	0/0:21,0:21:59.98:0,60,791
chr10	76328815	.	GA	G	800.42	PASS	AB=0.972;AC=5;AF=0.089;AN=56;BaseQRankSum=-1.441;DP=611;FS=11.575;HRun=10;HaplotypeScore=94.6825;InbreedingCoeff=0.3744;MQ=63.38;MQ0=22;MQRankSum=-0.207;QD=7.48;ReadPosRankSum=2.864;VQSLOD=1.0541;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,41:45:99:890,105,0	0/0:8,0:7:17.73:0,18,121	0/0:32,0:14:2.90:0,3,170	0/1:25,0:8:11.88:12,0,98	0/0:20,0:20:44.98:0,45,442	0/0:26,0:25:10.78:0,11,260	0/0:19,0:19:25.36:0,25,238	0/0:22,0:22:32.42:0,32,337	0/0:22,1:23:30.72:0,31,529	0/0:26,0:25:44.02:0,44,380	0/0:14,0:14:29.46:0,29,189	0/1:20,2:22:4.98:5,0,383	0/0:13,0:13:36.01:0,36,381	0/0:20,0:20:28.84:0,29,269	0/0:18,0:17:32.30:0,32,206	0/1:14,0:13:0.66:1,0,123	0/0:29,0:25:28.60:0,29,312	0/0:17,0:17:36.40:0,36,375	0/0:20,0:18:35.68:0,36,309	0/0:28,0:28:72.15:0,72,658	0/0:32,0:31:75.43:0,75,721	0/0:21,1:20:22.10:0,22,428	0/0:15,0:15:38.98:0,39,381	0/0:18,0:18:27.91:0,28,387	0/0:16,0:16:38.91:0,39,364	0/0:23,0:23:50.05:0,50,436	0/0:22,0:22:48:0,48,472	0/0:21,0:21:59.84:0,60,561
chr10	76328907	.	G	GAA	8339.63	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-2.643;DP=616;FS=30.879;HRun=12;HaplotypeScore=87.7622;InbreedingCoeff=0.9087;MQ=64.33;MQ0=0;MQRankSum=-0.307;QD=18.21;ReadPosRankSum=-2.658;VQSLOD=1.0806;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:46:2:240,2,0	1/1:6,4:10:17.46:194,17,0	0/0:26,0:18:22.63:0,23,208	0/0:14,1:7:8.57:0,9,58	1/1:5,28:38:84.75:817,85,0	1/1:7,5:13:22.52:308,23,0	1/1:4,12:18:23:247,23,0	1/1:12,18:31:56.49:684,56,0	0/0:14,0:15:2.08:0,2,222	1/1:20,5:27:14.50:374,14,0	1/1:3,12:16:27.60:382,28,0	0/0:20,0:20:44.97:0,45,409	0/0:16,0:18:34.77:0,35,287	1/1:14,7:22:47.36:503,47,0	1/1:10,11:22:53.13:669,53,0	1/1:1,22:25:38.62:513,39,0	1/1:13,8:20:39.54:435,40,0	1/1:4,2:13:14.54:174,15,0	1/1:6,9:16:35.89:424,36,0	1/1:11,20:33:63:679,63,0	1/1:5,12:18:20.39:212,20,0	0/0:19,0:19:43.01:0,43,376	0/0:16,0:17:45.02:0,45,411	0/0:23,0:25:34.60:0,35,517	1/1:4,10:15:15.05:204,15,0	1/1:7,16:26:39.37:495,39,0	1/1:4,23:28:41.23:533,41,0	1/1:7,11:19:20.80:251,21,0
chr10	76331131	.	AT	A	351.48	PASS	AB=0.875;AC=3;AF=0.054;AN=56;BaseQRankSum=5.355;DP=458;FS=1.702;HRun=11;HaplotypeScore=43.1308;InbreedingCoeff=0.5119;MQ=66.47;MQ0=7;MQRankSum=0.953;QD=8.17;ReadPosRankSum=2.070;VQSLOD=1.4443;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,23:29:53.91:442,54,0	0/0:7,0:7:15.01:0,15,149	0/0:15,0:6:5.43:0,5,25	0/0:10,0:6:2.64:0,3,15	0/0:32,0:33:87.02:0,87,888	0/0:22,0:23:59.95:0,60,597	0/0:16,0:17:21.78:0,22,346	0/0:24,0:23:40.89:0,41,564	0/0:17,0:17:41.94:0,42,388	0/0:10,0:10:21.03:0,21,209	0/0:14,0:14:33.04:0,33,327	0/0:11,0:12:32.19:0,32,279	0/0:7,0:7:17.88:0,18,172	0/0:17,0:16:36.08:0,36,372	0/0:21,0:21:39.03:0,39,378	0/0:14,0:14:39.04:0,39,383	0/0:23,0:23:57.11:0,57,581	0/0:14,0:14:35.81:0,36,352	0/0:14,0:14:11.40:0,11,283	0/1:12,2:14:13.03:13,0,281	0/0:5,0:5:15.01:0,15,144	0/0:18,0:18:47.62:0,48,429	0/0:15,0:15:39.06:0,39,400	0/0:27,0:27:69.10:0,69,697	0/0:13,0:13:27.04:0,27,270	0/0:15,0:15:25.85:0,26,245	0/0:16,0:17:17.69:0,18,342	0/0:13,0:13:24.05:0,24,246
chr10	76334307	.	ATAT	A	1569.32	PASS	AB=0.929;AC=26;AF=0.481;AN=54;BaseQRankSum=-2.787;DP=209;FS=0.000;HRun=0;HaplotypeScore=36.0931;InbreedingCoeff=0.1979;MQ=73.65;MQ0=7;MQRankSum=3.197;QD=9.51;ReadPosRankSum=3.060;VQSLOD=1.9164;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:15:6.04:29,6,0	1/1:0,3:3:6.02:101,6,0	0/0:12,0:6:2.04:0,2,31	0/1:19,0:9:1.28:1,0,56	0/0:7,0:7:4.58:0,5,30	1/1:1,9:13:15.05:217,15,0	1/1:0,6:6:2.99:51,3,0	1/1:8,14:20:39.21:381,39,0	0/0:1,0:1:3.01:0,3,62	1/1:0,12:12:29.98:348,30,0	1/1:0,5:5:11.52:100,12,0	0/0:1,0:1:3.01:0,3,62	0/0:3,0:3:3.46:0,3,25	0/1:1,3:4:13.95:43,0,14	0/0:2,0:2:3:0,3,25	0/0:2,5:7:0:0,0,0	1/1:3,17:21:1.05:242,1,0	0/1:15,0:13:28.06:28,0,54	0/1:11,0:11:41.51:91,0,42	1/1:2,0:2:0.97:21,1,0	1/1:1,0:1:3:26,3,0	0/0:2,0:2:6.02:0,6,124	./.	0/0:1,0:1:2.99:0,3,24	0/0:5,0:5:4.05:0,4,11	0/1:7,0:7:31.81:32,0,39	0/0:2,0:2:5.86:0,6,37	0/1:3,0:7:12.74:13,0,46
chr10	76334308	.	TA	T	1331.18	PASS	AB=0.938;AC=36;AF=0.667;AN=54;BaseQRankSum=0.452;DP=210;FS=0.000;HRun=1;HaplotypeScore=32.8875;InbreedingCoeff=0.4837;MQ=73.49;MQ0=7;MQRankSum=-1.093;QD=7.88;ReadPosRankSum=0.470;VQSLOD=0.5628;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,3:15:23.54:166,24,0	1/1:3,0:3:5.99:51,6,0	0/0:12,0:6:1.18:0,1,23	0/0:19,0:9:10.58:0,11,49	1/1:7,0:7:2.08:5,2,0	1/1:14,0:14:14.96:121,15,0	1/1:6,0:6:3:26,3,0	1/1:22,0:20:5.92:135,6,0	0/0:1,0:1:3.01:0,3,35	1/1:12,0:12:26.61:228,27,0	1/1:5,0:5:11.53:75,12,0	0/0:1,0:1:3.01:0,3,35	0/0:3,0:3:2.72:0,3,24	0/1:4,0:4:13.86:18,0,14	0/0:2,0:2:3:0,3,25	0/1:6,1:7:0:0,0,0	1/1:21,0:21:0.59:112,1,0	1/1:15,0:13:16.66:89,17,0	1/1:2,9:11:21.78:165,22,0	1/1:2,0:2:5.84:38,6,0	1/1:1,0:1:3:26,3,0	0/0:2,0:2:6.02:0,6,70	./.	0/0:1,0:1:2.99:0,3,24	1/1:5,0:5:11.63:67,12,0	1/1:8,0:7:15.78:92,16,0	1/1:3,0:2:6.42:29,6,0	1/1:7,0:7:7.61:43,8,0
chr10	76335538	.	T	TA	3722.90	PASS	AB=0.749;AC=19;AF=0.339;AN=56;BaseQRankSum=5.847;DP=642;FS=5.827;HRun=12;HaplotypeScore=79.8696;InbreedingCoeff=0.8019;MQ=68.77;MQ0=5;MQRankSum=0.922;QD=13.74;ReadPosRankSum=-0.070;VQSLOD=3.8773;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,101,743	0/1:4,9:13:0.40:154,0,0	0/1:34,0:19:1.26:1,0,63	0/0:18,0:8:14.69:0,15,97	0/0:27,2:31:31.06:0,31,371	1/1:5,22:27:42.07:409,42,0	1/1:4,20:24:20.36:358,20,0	1/1:10,15:27:25.89:386,26,0	0/0:18,0:18:44.61:0,45,320	1/1:10,24:33:21.06:506,21,0	0/1:9,9:19:7.23:241,0,7	0/0:26,0:26:62.56:0,63,457	0/0:26,0:25:41.62:0,42,306	1/1:7,11:18:23.37:362,23,0	1/1:6,23:29:50.07:519,50,0	1/1:4,18:22:36.05:346,36,0	1/1:3,19:23:45.96:440,46,0	0/0:19,0:19:41.71:0,42,305	0/0:24,0:27:19.34:0,19,273	0/0:20,0:21:41.70:0,42,306	0/0:18,0:18:47.40:0,47,338	0/0:21,0:22:49.73:0,50,353	0/0:12,0:12:20.80:0,21,152	0/0:20,0:21:21.81:0,22,321	0/0:17,1:18:0.32:0,0,237	0/0:18,0:18:41.74:0,42,305	0/0:23,0:24:58.62:0,59,420	0/0:7,0:7:14.90:0,15,109
chr10	76336561	.	CAA	C	4653.59	PASS	AB=0.623;AC=34;AF=0.607;AN=56;BaseQRankSum=-4.940;DP=606;FS=2.349;HRun=16;HaplotypeScore=91.0186;InbreedingCoeff=0.5448;MQ=65.37;MQ0=9;MQRankSum=1.533;QD=10.62;ReadPosRankSum=4.757;VQSLOD=3.9439;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,1:21:15.27:15,0,37	0/1:1,3:10:0.37:71,0,0	0/0:39,0:12:10.69:0,11,94	0/0:29,0:14:3.73:0,4,16	1/1:8,22:30:52.64:452,53,0	0/1:6,16:23:0.46:304,0,0	1/1:4,6:14:23.08:202,23,0	1/1:15,13:30:12.50:252,12,0	0/0:21,0:24:58.49:0,58,615	1/1:4,17:25:44.56:433,45,0	1/1:5,14:19:32.72:310,33,0	0/0:17,0:18:31.57:0,32,293	0/0:15,0:19:43.66:0,44,406	0/1:12,5:17:5.24:208,0,5	1/1:4,22:28:29.75:288,30,0	1/1:8,17:28:3.59:214,4,0	1/1:4,14:19:14.52:244,15,0	0/1:6,11:20:2.31:119,0,2	0/1:11,3:20:52.11:104,0,52	1/1:8,18:30:18.05:342,18,0	1/1:3,7:11:8.84:117,9,0	0/0:7,0:10:20.09:0,20,172	0/0:21,0:22:59.88:0,60,693	0/0:7,0:7:11.40:0,11,126	1/1:7,13:22:4.75:198,5,0	1/1:7,17:26:41.30:386,41,0	1/1:12,16:31:42.02:335,42,0	1/1:6,5:13:2.89:61,3,0
chr10	76336838	.	C	CAAA	7428.17	PASS	AB=0.538;AC=21;AF=0.375;AN=56;BaseQRankSum=-1.767;DP=563;FS=3.845;HRun=10;HaplotypeScore=85.6475;InbreedingCoeff=0.9077;MQ=68.68;MQ0=0;MQRankSum=-4.219;QD=30.32;ReadPosRankSum=-2.774;VQSLOD=3.7018;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:42:22.36:87,0,22	1/1:2,11:15:42.10:719,42,0	0/0:6,0:6:5.85:0,6,67	0/0:9,0:9:22.10:0,22,221	0/0:14,0:14:30.05:0,30,365	1/1:4,16:22:45.13:813,45,0	1/1:1,10:13:24.04:403,24,0	1/1:14,15:32:70.73:1157,71,0	0/0:17,0:17:51.16:0,51,620	1/1:10,15:31:63.14:1057,63,0	1/1:9,12:22:47.19:816,47,0	0/0:18,0:19:51.08:0,51,602	0/0:25,0:25:60.11:0,60,794	1/1:1,11:14:30.08:522,30,0	1/1:4,13:19:41.15:655,41,0	1/1:3,15:19:39.11:694,39,0	1/1:4,10:16:30.05:505,30,0	0/0:18,0:18:42.08:0,42,511	0/0:19,0:19:51.06:0,51,590	0/0:22,0:24:55.39:0,55,660	0/0:13,0:13:33.07:0,33,389	0/0:15,0:15:33.04:0,33,396	0/0:23,0:23:63.18:0,63,766	0/0:23,0:24:60.94:0,61,714	0/0:23,0:25:43.98:0,44,627	0/0:25,0:25:33.89:0,34,634	0/0:30,0:30:75.17:0,75,912	0/0:12,0:12:33.08:0,33,401
chr10	76339845	.	A	AC	16189.53	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-14.751;DP=537;FS=11.205;HRun=0;HaplotypeScore=48.3752;InbreedingCoeff=0.9982;MQ=77.64;MQ0=0;MQRankSum=-2.008;QD=41.83;ReadPosRankSum=0.942;VQSLOD=4.4690;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.22:0,93,1210	1/1:0,6:6:18.06:281,18,0	0/0:9,0:9:27.08:0,27,350	0/0:17,0:17:28.46:0,28,483	1/1:1,27:28:75.19:1144,75,0	1/1:3,24:27:66.22:1032,66,0	1/1:0,17:17:42.14:657,42,0	1/1:2,38:40:99:1661,114,0	0/0:15,0:15:45.13:0,45,599	1/1:1,11:12:33.11:514,33,0	1/1:2,17:19:51.06:766,51,0	0/0:13,0:13:39.13:0,39,545	0/0:25,0:25:72.21:0,72,958	1/1:0,14:14:36.12:563,36,0	1/1:1,21:22:57.19:891,57,0	1/1:0,34:34:93.32:1455,93,0	1/1:0,18:18:51.17:797,51,0	1/1:1,17:18:51.17:797,51,0	1/1:0,25:25:75.23:1121,75,0	1/1:2,13:15:39.13:610,39,0	1/1:0,19:19:54.18:845,54,0	0/0:12,0:12:36.09:0,36,456	0/0:9,0:9:27.08:0,27,363	0/0:18,0:18:54.17:0,54,739	1/1:0,17:17:48.16:751,48,0	1/1:1,25:26:72.19:1039,72,0	1/1:1,14:15:36.12:563,36,0	1/1:0,15:15:45.15:704,45,0
chr10	76344186	.	T	TA	7958.95	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-16.963;DP=628;FS=8.947;HRun=1;HaplotypeScore=53.2294;InbreedingCoeff=0.9970;MQ=64.70;MQ0=3;MQRankSum=-0.701;QD=41.89;ReadPosRankSum=1.970;VQSLOD=4.8927;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1344	0/0:6,0:6:18.06:0,18,234	0/0:26,0:8:21.04:0,21,256	0/0:20,0:11:23.79:0,24,277	1/1:0,25:25:75.25:1124,75,0	0/0:31,0:31:93.30:0,93,1207	0/0:19,0:19:57.17:0,57,725	0/0:30,0:30:87.27:0,87,1116	0/0:19,0:19:54.18:0,54,701	0/0:25,0:25:75.24:0,75,973	0/0:24,0:24:69.19:0,69,865	0/0:25,0:25:72.20:0,72,905	0/0:18,0:18:54.18:0,54,701	0/0:18,0:18:54.18:0,54,701	0/0:21,0:21:60.16:0,60,749	0/0:27,0:27:77.86:0,78,1010	0/0:22,0:22:66.21:0,66,853	1/1:1,11:12:33.11:494,33,0	1/1:0,12:12:36.12:540,36,0	1/1:0,29:29:81.23:1189,81,0	1/1:0,30:30:87.29:1304,87,0	0/0:22,0:22:66.21:0,66,857	0/0:18,0:18:54.18:0,54,701	0/0:30,0:30:90.29:0,90,1169	1/1:2,18:20:51.17:764,51,0	1/1:2,29:31:28.57:1240,29,0	1/1:0,24:24:66.22:989,66,0	1/1:0,7:7:21.07:315,21,0
chr10	76344793	.	AT	A	2349.61	PASS	AB=0.925;AC=24;AF=0.429;AN=56;BaseQRankSum=8.529;DP=499;FS=1.782;HRun=14;HaplotypeScore=78.9204;InbreedingCoeff=0.7211;MQ=72.24;MQ0=2;MQRankSum=-1.100;QD=9.87;ReadPosRankSum=3.112;VQSLOD=3.4323;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,11:14:32.65:226,33,0	0/0:10,0:10:0.72:0,1,64	0/1:14,0:9:11.03:12,0,11	0/1:20,1:14:1.32:1,0,81	1/1:2,18:20:38.37:351,38,0	0/0:28,2:30:17.39:0,17,231	0/0:17,0:17:35.55:0,36,180	0/0:28,2:30:25.52:0,26,169	0/0:14,1:15:15.44:0,15,278	0/0:23,1:24:21.82:0,22,169	0/0:20,1:21:27.64:0,28,196	0/0:15,0:15:37.47:0,37,325	0/0:16,1:18:22.05:0,22,302	0/1:6,2:8:3.52:4,0,51	0/0:24,0:24:50.19:0,50,253	0/0:19,0:19:41.57:0,42,200	0/0:15,0:15:34.16:0,34,184	1/1:2,9:11:23.77:164,24,0	1/1:6,9:17:30.73:192,31,0	1/1:4,14:18:41.48:287,41,0	1/1:2,10:12:20.81:144,21,0	0/0:16,0:18:38.83:0,39,340	0/1:15,1:18:5.40:5,0,216	0/0:4,1:5:3:0,3,28	1/1:5,15:21:44.83:296,45,0	1/1:6,15:22:46.47:308,46,0	1/1:7,23:31:60.76:465,61,0	1/1:3,7:10:14.74:102,15,0
chr10	76344807	.	T	TG	5263.56	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=3.281;DP=501;FS=6.715;HRun=1;HaplotypeScore=75.8214;InbreedingCoeff=0.8736;MQ=72.21;MQ0=2;MQRankSum=-1.305;QD=13.36;ReadPosRankSum=1.789;VQSLOD=3.7640;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:15:39.29:257,39,0	1/1:11,0:11:11.92:55,12,0	0/1:17,0:11:8.07:8,0,90	0/0:19,0:13:22.66:0,23,151	1/1:25,0:25:70.30:457,70,0	1/1:26,1:27:32.01:258,32,0	1/1:17,0:17:18.41:121,18,0	1/1:33,2:36:82.46:586,82,0	0/0:15,0:15:42.01:0,42,454	1/1:23,0:23:40.15:254,40,0	1/1:23,0:23:37.17:229,37,0	0/0:18,0:18:48.98:0,49,542	0/0:16,0:16:41.24:0,41,410	1/1:10,1:11:24.93:189,25,0	1/1:20,1:21:5.53:174,6,0	1/1:20,0:20:36.19:218,36,0	1/1:13,1:14:15.08:114,15,0	1/1:11,0:11:29.07:169,29,0	1/1:14,0:14:38.19:253,38,0	1/1:17,0:17:50.03:325,50,0	1/1:12,0:12:26.05:167,26,0	0/0:16,0:16:44.11:0,44,506	0/0:20,0:20:51.10:0,51,494	0/0:3,0:3:6.01:0,6,63	1/1:18,0:18:49.97:324,50,0	1/1:20,0:20:58.27:397,58,0	1/1:28,0:28:80.54:479,81,0	1/1:12,0:12:32.64:229,33,0
chr10	76345572	.	GTATT	G	13079.49	PASS	AB=0.950;AC=22;AF=0.393;AN=56;BaseQRankSum=16.446;DP=661;FS=1.683;HRun=0;HaplotypeScore=112.0215;InbreedingCoeff=0.8975;MQ=80.32;MQ0=2;MQRankSum=-6.041;QD=40.87;ReadPosRankSum=0.368;VQSLOD=5.2374;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.18:0,66,1688	1/1:0,10:10:27.09:512,27,0	0/0:25,0:25:46.90:0,47,1561	0/0:15,0:15:42.14:0,42,1055	0/0:29,0:29:81.28:0,81,2175	1/1:1,22:23:60.21:1139,60,0	1/1:0,28:28:78.27:1476,78,0	1/1:2,38:40:99:2059,114,0	0/1:18,1:19:2.74:3,0,1210	1/1:1,28:29:84.29:1595,84,0	1/1:0,18:18:48.16:911,48,0	0/0:29,0:29:84.27:0,84,2185	0/0:30,0:30:87.30:0,87,2285	1/1:0,30:30:78.27:1481,78,0	1/1:0,32:32:81.28:1537,81,0	1/1:2,36:36:12.77:1624,13,0	1/1:0,15:15:39.13:740,39,0	0/0:12,0:12:36.12:0,36,951	0/0:13,0:13:39.13:0,39,1018	0/0:21,0:21:63.22:0,63,1687	0/0:19,0:19:57.20:0,57,1475	0/0:22,0:22:63.22:0,63,1670	0/0:25,0:25:75.24:0,75,1885	0/0:10,0:10:30.10:0,30,799	0/0:24,0:24:63.19:0,63,1634	0/1:36,2:38:2.58:3,0,2644	0/0:28,0:28:81.28:0,81,2178	0/0:16,0:16:48.16:0,48,1296
chr10	76346833	.	CAA	C	7402.88	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=17.602;DP=642;FS=5.051;HRun=2;HaplotypeScore=119.1907;InbreedingCoeff=0.9992;MQ=88.44;MQ0=0;MQRankSum=-5.118;QD=30.85;ReadPosRankSum=-0.011;VQSLOD=4.6229;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.23:0,72,1412	1/1:0,7:7:21:235,21,0	0/0:25,0:25:60.66:0,61,1087	0/0:24,0:24:65.42:0,65,977	0/0:18,0:18:54.14:0,54,957	1/1:5,31:36:99:1120,99,0	1/1:1,9:10:29.99:286,30,0	1/1:14,24:35:99:1049,105,0	0/0:21,0:21:63.17:0,63,1213	1/1:1,12:13:36.10:429,36,0	1/1:0,23:23:60.10:675,60,0	0/0:35,0:35:99:0,99,1955	0/0:34,0:34:99:0,102,1871	1/1:7,17:24:62.58:679,63,0	1/1:2,30:32:93.19:1068,93,0	1/1:6,29:35:99:1165,105,0	1/1:6,16:22:63.06:696,63,0	0/0:11,0:11:30.09:0,30,541	0/0:24,0:24:69.21:0,69,1306	0/0:20,0:20:60.18:0,60,1146	0/0:20,0:20:59.94:0,60,1158	0/0:19,0:19:57.19:0,57,1123	0/0:23,0:23:66.63:0,67,1285	0/0:13,0:13:39.03:0,39,644	0/0:20,0:20:60.17:0,60,1103	0/0:28,0:28:84.27:0,84,1637	0/0:28,0:28:84.25:0,84,1603	0/0:15,0:15:45.15:0,45,911
chr10	76346840	.	TAG	T	7357.98	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=18.328;DP=617;FS=0.000;HRun=0;HaplotypeScore=116.1079;InbreedingCoeff=0.9986;MQ=88.51;MQ0=0;MQRankSum=-5.675;QD=31.58;ReadPosRankSum=-0.447;VQSLOD=6.1711;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.19:0,75,1406	1/1:0,7:7:18.06:218,18,0	0/0:26,0:26:49.41:0,49,1081	0/0:20,0:21:57.11:0,57,999	0/0:14,0:14:42.14:0,42,839	1/1:4,31:35:93.23:1072,93,0	1/1:1,9:10:30.05:296,30,0	1/1:2,32:31:93.13:981,93,0	0/0:20,0:20:57.18:0,57,1109	1/1:0,15:15:45.06:496,45,0	1/1:3,19:22:60.16:687,60,0	0/0:33,0:33:96.30:0,96,1873	0/0:33,0:33:99:0,99,1892	1/1:3,17:20:54.15:642,54,0	1/1:6,30:36:99:1199,105,0	1/1:4,29:33:96.24:1099,96,0	1/1:5,16:21:57.15:668,57,0	0/0:10,0:10:30.06:0,30,532	0/0:21,0:21:60.20:0,60,1185	0/0:20,0:20:60.12:0,60,1092	0/0:19,0:19:57.20:0,57,1155	0/0:19,0:19:57.20:0,57,1155	0/0:23,0:23:66.23:0,66,1315	0/0:13,0:13:36.11:0,36,679	0/0:18,0:18:54.17:0,54,1059	0/0:27,0:27:81.27:0,81,1603	0/0:26,0:26:78.25:0,78,1545	0/0:16,0:16:45.15:0,45,912
chr10	76348232	.	ATCT	A	11146.94	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=17.499;DP=662;FS=0.000;HRun=0;HaplotypeScore=95.4018;InbreedingCoeff=0.9990;MQ=74.44;MQ0=0;MQRankSum=-5.148;QD=40.83;ReadPosRankSum=0.720;VQSLOD=5.4266;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.20:0,60,1233	1/1:0,8:8:24.08:392,24,0	0/0:19,0:19:48.15:0,48,857	0/0:10,0:10:21.07:0,21,420	0/0:27,0:27:64.46:0,64,1725	1/1:1,30:31:81.27:1298,81,0	1/1:1,18:19:36.12:581,36,0	1/1:1,30:31:90.23:1319,90,0	0/0:22,0:22:63.22:0,63,1391	1/1:0,27:27:81.25:1238,81,0	1/1:2,34:36:93.31:1445,93,0	0/0:25,0:25:72.25:0,72,1556	0/0:25,0:25:69.20:0,69,1488	1/1:1,25:26:69.24:1127,69,0	1/1:0,47:47:99:1934,120,0	1/1:2,30:32:72.01:1176,72,0	1/1:0,16:16:39.13:637,39,0	0/0:19,0:19:45.15:0,45,888	0/0:16,0:16:42.14:0,42,818	0/0:44,0:44:99:0,129,2752	0/0:11,0:11:33.11:0,33,737	0/0:20,0:20:57.20:0,57,1236	0/0:18,0:18:51.16:0,51,1079	0/0:13,0:13:39.13:0,39,871	0/0:18,0:18:51.17:0,51,1110	0/0:32,0:32:36.27:0,36,1699	0/0:33,0:33:93.32:0,93,2053	0/0:16,0:16:42.14:0,42,847
chr10	76348897	.	A	ATATT	4050.30	PASS	AB=1.000;AC=22;AF=0.524;AN=42;BaseQRankSum=-5.679;DP=147;FS=5.126;HRun=0;HaplotypeScore=24.0939;InbreedingCoeff=0.4295;MQ=92.14;MQ0=5;MQRankSum=-0.825;QD=43.55;ReadPosRankSum=2.666;VQSLOD=3.1361;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,0:1:2.98:21,3,0	0/0:15,0:7:3.26:0,3,31	0/0:23,0:12:7.93:0,8,65	0/0:1,0:1:2.99:0,3,24	1/1:0,3:5:9:183,9,0	1/1:0,2:2:3.01:81,3,0	1/1:6,41:49:99:2022,126,0	./.	1/1:0,4:4:12.02:213,12,0	1/1:0,2:2:5.98:101,6,0	0/0:2,0:2:6.02:0,6,89	0/1:3,0:3:42.78:43,0,50	1/1:1,1:3:9.03:170,9,0	1/1:0,3:4:9.03:243,9,0	1/1:0,1:1:3.01:81,3,0	1/1:0,15:15:33.11:886,33,0	0/1:3,0:3:7.09:7,0,16	./.	0/0:1,0:1:3:0,3,25	0/0:1,0:1:2.80:0,3,13	./.	./.	./.	0/0:1,0:1:2.99:0,3,23	./.	0/0:1,0:1:3:0,3,25	0/0:2,0:2:5.99:0,6,48
chr10	76349655	.	A	AT	9467.81	PASS	AB=0.833;AC=38;AF=0.679;AN=56;BaseQRankSum=-11.185;DP=628;FS=1.130;HRun=10;HaplotypeScore=65.9108;InbreedingCoeff=0.8418;MQ=70.02;MQ0=0;MQRankSum=-0.442;QD=21.67;ReadPosRankSum=-1.483;VQSLOD=5.2601;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:71.83:0,72,588	1/1:1,8:9:18.04:192,18,0	0/1:18,0:16:5.04:5,0,181	0/0:18,0:16:25.01:0,25,170	1/1:1,29:30:58.36:754,58,0	1/1:2,18:21:50.96:526,51,0	1/1:3,21:24:42.11:448,42,0	1/1:8,36:44:65.30:1019,65,0	0/0:18,0:18:44.93:0,45,369	1/1:3,17:21:51.11:528,51,0	1/1:4,18:22:32.49:541,32,0	0/0:32,0:32:80.90:0,81,665	0/0:22,0:22:56.93:0,57,468	1/1:2,19:22:41.17:474,41,0	1/1:4,16:20:39.10:416,39,0	1/1:4,24:28:60.15:640,60,0	1/1:4,30:34:75.19:799,75,0	1/1:3,22:25:55.02:578,55,0	1/1:2,14:16:42.11:447,42,0	1/1:1,16:17:48.55:499,49,0	1/1:4,14:18:27.07:288,27,0	0/0:27,0:27:65.80:0,66,530	0/0:17,1:18:3.94:0,4,239	0/0:24,1:25:33.90:0,34,481	1/1:1,10:11:15.04:160,15,0	1/1:5,17:22:46:480,46,0	1/1:1,21:23:51.10:532,51,0	0/1:6,6:12:6.60:142,0,7
chr10	76349811	.	CGTCCGT	C	9337.08	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.851;DP=688;FS=0.364;HRun=0;HaplotypeScore=147.1845;InbreedingCoeff=0.9974;MQ=72.62;MQ0=1;MQRankSum=-16.068;QD=54.92;ReadPosRankSum=1.190;VQSLOD=4.9453;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,148,5248	0/0:12,0:12:36.12:0,36,1291	0/0:29,0:29:78.27:0,78,2666	0/0:12,0:12:36.12:0,36,1166	1/1:0,18:18:39.13:898,39,0	0/0:31,0:31:93.32:0,93,3303	0/0:24,0:24:67.10:0,67,2399	0/0:38,0:38:99:0,105,3525	0/0:24,0:24:69.24:0,69,2354	0/0:28,0:28:84.29:0,84,2998	0/0:29,0:29:87.30:0,87,2940	0/0:33,0:33:96.33:0,96,3431	0/0:23,0:23:66.23:0,66,2338	0/0:26,0:26:78.27:0,78,2726	0/0:28,0:28:81.26:0,81,2772	0/0:29,0:29:87.28:0,87,2859	0/0:37,0:37:99:0,108,3890	1/1:1,13:14:30.10:719,30,0	1/1:2,12:14:36.10:749,36,0	1/1:2,20:21:51.18:1204,51,0	1/1:5,15:20:39.13:934,39,0	0/0:25,0:25:72.25:0,72,2555	0/0:16,0:16:45.14:0,45,1539	0/0:23,0:23:69.24:0,69,2419	1/1:2,19:21:45.15:1064,45,0	1/1:4,24:28:75.25:1754,75,0	1/1:1,27:28:69.24:1654,69,0	1/1:0,5:5:15.05:360,15,0
chr10	76350258	.	GGT	G	5907.44	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-3.202;DP=645;FS=9.568;HRun=0;HaplotypeScore=100.4722;InbreedingCoeff=0.9626;MQ=61.56;MQ0=7;MQRankSum=-0.563;QD=22.04;ReadPosRankSum=0.162;VQSLOD=5.1674;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:27:35.99:0,36,316	1/1:1,6:7:15.05:181,15,0	0/0:30,0:16:28.34:0,28,416	0/0:13,0:8:5.61:0,6,87	0/0:5,1:23:8.82:0,9,333	1/1:2,24:25:54.17:651,54,0	1/1:9,10:19:24.07:289,24,0	1/1:18,15:34:47.96:545,48,0	0/0:20,2:22:17.99:0,18,781	1/1:7,28:36:84.05:956,84,0	1/1:8,25:34:69.04:810,69,0	0/0:21,0:21:54.17:0,54,830	0/0:18,1:19:14.97:0,15,702	1/1:1,25:26:63.19:760,63,0	1/1:6,18:23:36.11:434,36,0	1/1:7,27:34:60.01:702,60,0	1/1:7,20:27:48.15:579,48,0	0/0:4,0:16:27.01:0,27,253	0/0:4,0:16:41.95:0,42,382	0/0:4,0:26:48:0,48,432	0/0:5,0:19:33.01:0,33,329	0/0:17,0:17:41.91:0,42,674	0/0:21,0:21:57.19:0,57,909	0/0:9,0:9:21.05:0,21,313	0/0:6,0:25:48.01:0,48,466	0/0:5,0:22:54.01:0,54,499	0/0:7,0:43:90:0,90,833	0/0:1,0:6:11.87:0,12,94
chr10	76351649	.	CTCCACAGCAGCCCAT	C	1966.97	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.922;DP=720;FS=8.681;HRun=0;HaplotypeScore=282.6259;InbreedingCoeff=0.9999;MQ=92.85;MQ0=0;MQRankSum=-7.022;QD=78.68;ReadPosRankSum=0.605;VQSLOD=2.1541;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:25:51.17:2062,51,0	0/0:14,0:14:42.14:0,42,3065	0/0:33,0:33:90.31:0,90,5407	0/0:29,0:29:78.27:0,78,4562	0/0:23,0:23:69.24:0,69,5039	0/0:27,0:27:78.27:0,78,5487	0/0:20,0:20:57.20:0,57,3907	0/0:43,0:43:99:0,126,8689	0/0:22,0:22:63.22:0,63,4289	0/0:29,0:29:84.29:0,84,5949	0/0:24,0:24:69.24:0,69,4887	0/0:34,0:34:99:0,99,6970	0/0:25,0:25:75.26:0,75,5406	0/0:25,0:25:72.25:0,72,5275	0/0:43,0:43:99:0,120,8688	0/0:17,0:17:48.15:0,48,2800	0/0:21,0:21:60.21:0,60,4402	0/0:15,0:15:45.15:0,45,2985	0/0:23,0:23:63.22:0,63,4051	0/0:26,0:26:75.26:0,75,5027	0/0:27,0:27:81.26:0,81,5431	0/0:20,0:20:60.21:0,60,4002	0/0:20,0:20:60.21:0,60,4467	0/0:36,0:35:99:0,99,7253	0/0:23,0:23:69.24:0,69,4574	0/0:27,0:27:72.25:0,72,5037	0/0:34,0:34:96.32:0,96,6621	0/0:15,0:15:42.14:0,42,3021
chr10	76352699	.	T	TA	6225.49	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-13.738;DP=573;FS=6.064;HRun=3;HaplotypeScore=54.5996;InbreedingCoeff=0.9938;MQ=72.53;MQ0=0;MQRankSum=1.491;QD=31.60;ReadPosRankSum=0.147;VQSLOD=4.5150;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:53.71:0,54,404	1/1:1,10:11:27.09:377,27,0	0/0:9,0:9:12.02:0,12,129	0/0:17,0:16:36:0,36,404	0/0:29,0:29:78.20:0,78,899	1/1:0,26:26:72.24:1005,72,0	1/1:2,6:8:18.06:252,18,0	1/1:2,26:28:78.17:989,78,0	0/0:14,0:14:33.08:0,33,372	1/1:1,19:20:56.84:744,57,0	1/1:3,19:22:54.09:729,54,0	0/0:24,0:24:72.10:0,72,809	0/0:20,0:20:60.11:0,60,655	1/1:1,14:15:30.10:413,30,0	1/1:2,18:20:33.11:461,33,0	1/1:2,18:20:33.11:461,33,0	1/1:1,26:26:57.19:795,57,0	0/0:22,0:22:56.20:0,56,699	0/0:28,0:28:81.18:0,81,916	0/0:34,0:34:89.02:0,89,1146	0/0:18,0:18:40.10:0,40,523	0/0:20,0:20:57.11:0,57,630	0/0:18,0:18:48.15:0,48,574	0/0:14,0:14:39.09:0,39,445	0/0:17,0:17:48.14:0,48,566	0/0:21,0:21:57.15:0,57,655	0/0:29,0:29:84.23:0,84,976	0/0:22,0:22:63.14:0,63,724
chr10	76352702	.	AT	A	295.71	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.230;DP=554;FS=1.926;HRun=10;HaplotypeScore=74.2369;InbreedingCoeff=0.9421;MQ=71.12;MQ0=0;MQRankSum=-1.936;QD=16.43;ReadPosRankSum=0.211;VQSLOD=4.1563;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:18:44.98:391,45,0	0/0:10,0:10:26.60:0,27,168	0/0:9,0:9:12.95:0,13,112	0/0:16,0:15:13.04:0,13,277	0/0:29,0:29:67.35:0,67,802	0/0:27,0:27:73.88:0,74,470	0/0:6,0:6:17.74:0,18,112	0/0:29,0:29:73.90:0,74,501	0/0:12,0:12:30.06:0,30,322	0/0:20,0:20:53.15:0,53,341	0/0:20,0:20:56.24:0,56,381	0/0:24,0:24:66.14:0,66,715	0/0:20,0:20:51.14:0,51,562	0/0:13,0:13:29.45:0,29,182	0/0:13,0:13:32.47:0,32,204	0/0:19,0:19:35.38:0,35,220	0/0:26,0:25:59.07:0,59,385	0/0:21,0:22:60:0,60,645	0/0:26,1:27:46.14:0,46,737	0/0:33,0:34:99:0,99,1069	0/0:17,0:19:50.79:0,51,517	0/0:20,0:20:45.11:0,45,491	0/0:16,0:16:48.13:0,48,531	0/0:13,0:13:33.09:0,33,365	0/0:17,0:17:48.11:0,48,522	0/0:22,0:22:57.05:0,57,613	0/0:28,0:28:75.20:0,75,830	0/0:25,0:25:66.12:0,66,701
chr10	76354682	.	C	CA	10008.76	PASS	AB=0.929;AC=19;AF=0.339;AN=56;BaseQRankSum=-16.124;DP=783;FS=2.030;HRun=0;HaplotypeScore=72.1881;InbreedingCoeff=0.9292;MQ=64.08;MQ0=0;MQRankSum=-1.945;QD=41.36;ReadPosRankSum=1.627;VQSLOD=5.6187;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,157,2175	0/1:12,1:13:8.85:9,0,461	0/0:26,0:26:75.09:0,75,1022	0/0:28,0:27:78.24:0,78,1060	1/1:2,30:32:75.26:1199,75,0	0/0:16,0:16:45.12:0,45,594	0/0:28,0:28:84.28:0,84,1170	0/0:23,0:23:69.18:0,69,926	0/0:27,0:27:81.25:0,81,1112	0/0:20,0:20:54.18:0,54,755	0/0:12,0:12:36.12:0,36,503	0/0:46,0:46:99:0,132,1840	0/0:27,0:27:78.26:0,78,1090	0/0:36,0:36:99:0,108,1508	0/0:39,0:39:99:0,117,1618	0/0:36,0:36:99:0,108,1492	0/0:48,0:48:99:0,141,1931	1/1:0,21:21:57.19:911,57,0	1/1:0,23:23:69.19:1075,69,0	1/1:0,26:26:78.27:1247,78,0	1/1:0,30:30:84.29:1343,84,0	0/0:20,0:20:60.20:0,60,839	0/0:17,0:17:51.17:0,51,711	0/0:38,0:38:91.38:0,91,1490	1/1:1,23:24:66.23:1054,66,0	1/1:1,27:28:39.30:1157,39,0	1/1:0,34:34:93.32:1486,93,0	1/1:0,11:11:33.11:527,33,0
chr10	76355164	.	CAAAACA	C	3446.11	PASS	AB=0.845;AC=17;AF=0.304;AN=56;BaseQRankSum=0.340;DP=542;FS=6.768;HRun=0;HaplotypeScore=128.7415;InbreedingCoeff=0.7061;MQ=56.18;MQ0=7;MQRankSum=-2.862;QD=17.49;ReadPosRankSum=-5.108;VQSLOD=0.8604;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:36.98:0,37,575	0/0:12,0:12:23.34:0,23,221	0/0:25,0:10:0.02:0,0,44	0/1:39,0:9:22.99:23,0,73	1/1:3,16:20:37.82:483,38,0	0/0:10,0:10:20.20:0,20,177	0/0:15,0:15:32.86:0,33,329	0/0:28,0:26:20.63:0,21,368	0/0:12,0:12:33.09:0,33,753	0/0:22,0:22:35.72:0,36,419	0/0:21,0:20:28.98:0,29,347	0/0:21,0:21:40.52:0,41,941	0/0:21,0:21:56.96:0,57,1124	0/0:18,0:18:36.47:0,36,295	0/0:26,0:25:43.53:0,44,443	0/0:19,0:19:39.83:0,40,403	0/0:23,0:23:53.29:0,53,651	0/1:16,1:17:69.76:165,0,70	1/1:20,3:23:13.61:502,14,0	1/1:5,19:25:51.70:558,52,0	0/1:4,9:13:11.44:99,0,11	0/0:19,0:18:28.79:0,29,918	0/0:14,0:14:38.99:0,39,967	0/0:14,0:14:42.01:0,42,957	1/1:3,14:17:21.07:474,21,0	1/1:7,3:10:29.02:360,29,0	1/1:18,5:22:41.52:673,42,0	1/1:8,0:8:14.89:110,15,0
chr10	76355166	.	AAAC	A	2606.36	PASS	AB=0.989;AC=24;AF=0.429;AN=56;BaseQRankSum=6.803;DP=547;FS=2.231;HRun=0;HaplotypeScore=103.7568;InbreedingCoeff=-0.1144;MQ=55.25;MQ0=7;MQRankSum=-4.071;QD=6.62;ReadPosRankSum=4.133;VQSLOD=2.2507;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:26.98:0,27,328	0/1:12,0:12:39.56:56,0,40	0/0:25,0:9:1.47:0,1,90	0/1:38,0:8:4.02:4,0,50	0/1:21,0:20:4.63:208,0,5	0/1:10,0:10:2.49:2,0,73	0/1:15,1:16:51.36:95,0,51	0/1:27,0:25:99:102,0,103	0/0:12,0:12:32.66:0,33,412	0/1:23,0:23:42.06:42,0,161	0/1:20,1:20:23.37:138,0,23	0/0:20,0:20:29.94:0,30,504	0/0:22,0:22:42.99:0,43,527	0/1:20,0:20:67.23:210,0,67	0/1:24,2:25:77.17:182,0,77	0/1:18,0:18:67.43:112,0,67	0/1:23,0:23:8.83:9,0,141	0/1:17,0:17:46.04:106,0,46	0/1:25,0:24:54.27:257,0,54	0/1:23,0:23:4.66:246,0,5	0/1:13,0:13:20.51:61,0,21	0/0:19,0:18:47.57:0,48,599	0/0:15,0:15:31.91:0,32,519	0/0:15,0:15:43.61:0,44,552	1/1:17,0:17:21.07:259,21,0	1/1:11,0:11:13.57:237,14,0	1/1:24,0:23:23.62:350,24,0	1/1:9,0:9:9.61:103,10,0
chr10	76355167	.	AAC	A	2026.76	PASS	AB=0.987;AC=24;AF=0.429;AN=56;BaseQRankSum=5.846;DP=535;FS=29.267;HRun=0;HaplotypeScore=97.0460;InbreedingCoeff=0.1595;MQ=55.35;MQ0=7;MQRankSum=-6.771;QD=5.49;ReadPosRankSum=0.405;VQSLOD=1.2602;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:23.47:0,23,252	0/0:11,0:11:16.88:0,17,94	0/1:24,0:9:0.11:0,0,99	0/1:36,0:8:4.92:5,0,35	1/1:21,0:20:16.40:208,16,0	0/0:9,0:9:17.85:0,18,111	0/1:15,0:15:14.66:15,0,69	0/1:26,0:24:4.56:5,0,167	0/0:12,0:12:27.07:0,27,304	0/0:21,0:21:42.28:0,42,283	0/1:20,0:19:10.09:10,0,83	0/0:20,0:20:7.80:0,8,363	0/0:21,0:21:19.82:0,20,342	0/1:19,1:20:75.81:145,0,76	0/1:26,0:25:52.48:52,0,118	0/1:18,0:18:58.97:59,0,109	0/1:21,3:24:49.93:160,0,50	0/1:16,0:16:29.02:101,0,29	0/1:25,0:24:16.49:259,0,16	1/1:23,0:23:20.98:257,21,0	0/1:13,0:13:22.57:55,0,23	0/0:18,0:17:45.26:0,45,495	0/0:14,0:14:31.24:0,31,387	0/0:15,0:15:43.11:0,43,422	1/1:16,0:16:21.05:222,21,0	1/1:14,0:14:24.72:250,25,0	1/1:20,2:21:34.58:309,35,0	1/1:9,0:9:4.31:98,4,0
chr10	76355802	.	C	CTT	9544.14	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-5.414;DP=487;FS=3.065;HRun=11;HaplotypeScore=66.2625;InbreedingCoeff=0.9691;MQ=65.37;MQ0=6;MQRankSum=-2.795;QD=24.60;ReadPosRankSum=0.065;VQSLOD=4.6946;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:19:32.91:113,33,0	1/1:3,4:7:9.03:130,9,0	0/0:14,0:11:12.54:0,13,109	0/0:12,0:11:17.99:0,18,166	1/1:5,11:18:41.11:523,41,0	1/1:5,18:22:36.12:521,36,0	1/1:6,6:11:24.08:340,24,0	1/1:14,22:36:71.59:1096,72,0	0/0:16,0:17:41.69:0,42,378	1/1:6,11:17:27.04:349,27,0	1/1:11,14:24:48.11:652,48,0	0/0:16,0:17:41.80:0,42,390	0/0:12,0:12:30.04:0,30,291	1/1:3,10:13:26.96:320,27,0	1/1:2,13:18:39.13:560,39,0	1/1:3,21:25:54.18:782,54,0	1/1:4,12:16:32.63:447,33,0	1/1:4,15:20:41.96:700,42,0	1/1:10,12:24:20.85:394,21,0	1/1:7,15:23:42.05:556,42,0	1/1:0,5:5:9.03:130,9,0	0/0:7,0:7:18.02:0,18,175	0/0:7,0:7:17.98:0,18,169	0/0:12,0:13:26.71:0,27,231	1/1:3,11:14:33.11:478,33,0	1/1:4,0:24:19.42:142,19,0	1/1:5,17:24:53.67:738,54,0	1/1:2,14:15:41.63:573,42,0
chr10	76358183	.	C	CT	1939.87	PASS	AB=0.826;AC=21;AF=0.375;AN=56;BaseQRankSum=-4.153;DP=554;FS=2.020;HRun=14;HaplotypeScore=66.7110;InbreedingCoeff=0.4905;MQ=64.93;MQ0=6;MQRankSum=1.329;QD=6.60;ReadPosRankSum=-0.534;VQSLOD=2.4618;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:47.12:0,47,302	1/1:3,10:13:7.73:192,8,0	0/1:30,0:15:0.83:1,0,81	0/0:15,0:8:7.08:0,7,58	0/1:22,1:24:4.36:4,0,212	1/1:10,14:23:17.18:179,17,0	1/1:4,9:13:25.24:214,25,0	0/1:14,13:27:7.17:166,0,7	0/0:15,0:15:22.66:0,23,151	1/1:10,16:24:41.82:334,42,0	1/1:13,6:18:12.66:250,13,0	0/0:17,0:18:38.32:0,38,237	0/0:17,0:17:28.47:0,28,178	1/1:2,8:10:9:79,9,0	1/1:7,16:23:32.84:278,33,0	0/1:8,17:25:13.86:156,0,14	0/1:10,18:28:28.97:233,0,29	0/0:14,0:14:26.29:0,26,165	0/0:19,1:21:30.52:0,31,184	0/0:30,0:32:57.72:0,58,351	0/0:9,0:9:17.71:0,18,115	0/1:5,0:5:14.51:15,0,45	0/0:16,0:17:28.98:0,29,190	0/0:15,0:15:29.50:0,30,191	0/0:18,1:20:17.01:0,17,229	0/1:21,1:22:32.29:32,0,81	0/0:29,2:32:19.08:0,19,348	0/0:10,0:9:26.56:0,27,169
chr10	76359032	.	TAC	T	539.77	PASS	AB=0.933;AC=20;AF=0.385;AN=52;BaseQRankSum=0.036;DP=475;FS=3.008;HRun=0;HaplotypeScore=66.1402;InbreedingCoeff=0.4084;MQ=74.95;MQ0=12;MQRankSum=0.413;QD=2.45;ReadPosRankSum=2.051;VQSLOD=1.5432;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:26:0.08:0,0,0	1/1:4,2:6:3.01:32,3,0	./.	./.	0/0:17,0:22:10.94:0,11,80	1/1:15,0:14:11.80:87,12,0	1/1:12,1:15:8.54:65,9,0	0/0:18,0:17:2.96:0,3,19	0/0:11,0:11:11.99:0,12,147	0/1:19,0:18:0.50:16,0,1	1/1:9,4:13:3:32,3,0	0/0:14,0:14:21.04:0,21,251	0/0:10,0:10:17.90:0,18,207	1/1:6,5:11:2.84:14,3,0	0/1:5,10:15:25.14:143,0,25	1/1:9,12:21:15.04:161,15,0	1/1:20,9:27:12.03:129,12,0	0/0:9,0:8:3:0,3,28	0/0:9,0:9:12.01:0,12,116	0/0:23,0:23:2.98:0,3,21	0/0:26,0:26:27:0,27,258	0/1:14,0:14:9.84:10,0,155	0/1:11,0:11:5.40:5,0,115	0/1:24,0:23:7.44:7,0,153	0/0:23,0:23:5.09:0,5,66	0/0:14,0:14:24.78:0,25,203	0/0:18,0:18:24.04:0,24,251	0/0:2,0:3:5.99:0,6,50
chr10	76359381	.	G	GT	6117.70	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-13.223;DP=578;FS=4.734;HRun=5;HaplotypeScore=52.3361;InbreedingCoeff=0.9757;MQ=75.20;MQ0=0;MQRankSum=-4.147;QD=33.99;ReadPosRankSum=0.381;VQSLOD=5.1020;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:36.09:0,36,387	0/0:6,0:6:18.05:0,18,193	0/0:14,0:14:4.20:0,4,244	0/0:15,0:15:29.98:0,30,300	1/1:2,23:25:57.19:749,57,0	0/0:33,0:33:87.20:0,87,927	0/0:11,0:11:33.08:0,33,355	0/0:41,0:41:99:0,114,1206	0/0:27,0:27:75.17:0,75,798	0/0:31,0:31:87.21:0,87,929	0/0:15,0:15:42.09:0,42,443	0/0:23,0:22:69.17:0,69,742	0/0:21,1:22:45.26:0,45,656	0/0:13,0:13:33.08:0,33,355	0/0:31,0:31:84.18:0,84,893	0/0:28,0:28:81.20:0,81,871	0/0:19,0:19:54.14:0,54,580	1/1:0,10:10:24.08:316,24,0	1/1:4,26:30:81.25:1044,81,0	1/1:1,21:22:63.16:809,63,0	1/1:0,12:12:30.10:395,30,0	0/0:23,0:23:57.14:0,57,612	0/0:21,0:21:54.13:0,54,580	0/0:12,0:12:36.07:0,36,375	1/1:2,19:21:42.14:553,42,0	1/1:2,20:22:30.95:752,31,0	1/1:0,26:26:78.25:1026,78,0	1/1:0,12:12:36.12:474,36,0
chr10	76362407	.	TG	T	2346.66	PASS	AB=0.843;AC=35;AF=0.700;AN=50;BaseQRankSum=2.219;DP=281;FS=19.724;HRun=11;HaplotypeScore=44.7663;InbreedingCoeff=0.5160;MQ=81.07;MQ0=4;MQRankSum=-2.434;QD=11.45;ReadPosRankSum=4.274;VQSLOD=1.1174;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:3.01:0,3,31	./.	0/0:21,0:13:15.03:0,15,153	0/0:25,0:16:7.74:0,8,48	1/1:1,3:4:11.99:98,12,0	1/1:4,6:10:20.01:154,20,0	1/1:3,11:14:21.05:182,21,0	0/0:9,0:9:2.99:0,3,23	0/0:4,0:4:12.03:0,12,126	1/1:2,4:6:14.98:123,15,0	1/1:2,1:4:5.03:30,5,0	0/1:5,0:5:9.02:9,0,105	0/0:4,0:4:0:0,0,0	1/1:6,0:6:5.09:23,5,0	1/1:0,4:4:11.98:98,12,0	0/1:4,7:10:8.03:146,0,8	1/1:8,14:23:33.20:256,33,0	1/1:2,13:15:32.91:271,33,0	1/1:7,3:7:5.85:49,6,0	1/1:4,5:9:20.75:162,21,0	1/1:8,20:28:49.47:381,49,0	./.	./.	0/1:20,2:22:10.20:10,0,289	1/1:4,1:5:8.98:73,9,0	1/1:3,6:9:14.81:112,15,0	1/1:0,7:7:20.98:172,21,0	1/1:3,7:10:20.68:154,21,0
chr10	76362541	.	C	CT	2223.37	PASS	AB=0.729;AC=17;AF=0.304;AN=56;BaseQRankSum=-4.576;DP=521;FS=12.919;HRun=11;HaplotypeScore=61.2461;InbreedingCoeff=0.4690;MQ=81.72;MQ0=0;MQRankSum=-0.916;QD=13.08;ReadPosRankSum=-2.087;VQSLOD=1.5521;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:30:66.83:0,67,509	0/0:4,0:5:8.01:0,8,52	0/0:31,0:25:2.57:0,3,116	0/0:16,0:13:8.69:0,9,68	1/1:5,12:17:29.95:274,30,0	0/0:33,1:34:37.70:0,38,466	0/0:18,0:20:16.04:0,16,256	0/0:26,0:27:46.55:0,47,340	0/0:15,0:15:35.84:0,36,279	0/0:21,0:21:50.78:0,51,394	0/1:8,1:9:9.52:10,0,118	0/0:15,1:16:2.38:0,2,201	0/1:12,2:14:40.02:40,0,93	0/0:30,0:30:61.83:0,62,486	0/0:18,0:18:29.82:0,30,232	0/0:22,0:22:49.81:0,50,375	0/0:27,0:27:74.71:0,75,580	1/1:5,13:19:1.35:349,1,0	0/1:6,12:18:7.16:283,0,7	1/1:2,8:11:26.83:238,27,0	0/1:7,9:18:33.77:218,0,34	0/0:10,0:10:17.90:0,18,139	0/0:8,0:9:19.92:0,20,143	0/0:20,0:20:50.77:0,51,395	1/1:2,15:18:32.90:319,33,0	0/1:10,11:22:4.12:298,0,4	1/1:8,10:18:0.81:189,1,0	1/1:0,6:6:18.04:183,18,0
chr10	76366704	.	C	CG	21406.48	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-20.271;DP=881;FS=5.823;HRun=0;HaplotypeScore=77.7765;InbreedingCoeff=0.9994;MQ=79.17;MQ0=0;MQRankSum=-3.181;QD=42.47;ReadPosRankSum=1.501;VQSLOD=5.5167;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:72,0:72:99:0,214,2941	1/1:0,10:10:27.09:431,27,0	0/0:22,0:22:66.21:0,66,894	0/0:27,0:26:67.85:0,68,828	1/1:1,21:22:54.10:830,54,0	1/1:0,27:27:69.24:1100,69,0	1/1:0,32:32:84.29:1341,84,0	1/1:0,22:22:66.07:894,66,0	0/0:48,0:48:99:0,144,1974	1/1:0,30:30:90.26:1397,90,0	1/1:1,19:20:51.17:804,51,0	0/0:58,0:58:99:0,175,2415	0/0:38,0:38:99:0,111,1527	1/1:0,31:31:84.29:1338,84,0	1/1:0,38:38:99:1723,108,0	1/1:1,41:42:99:1817,114,0	1/1:0,36:36:99:1675,105,0	1/1:0,27:27:69.24:1101,69,0	1/1:1,20:21:59.96:826,60,0	1/1:0,24:24:66.22:1036,66,0	1/1:0,44:44:99:1819,114,0	0/0:29,0:29:84.26:0,84,1143	0/0:26,0:26:72.23:0,72,988	0/0:57,0:57:99:0,165,2244	1/1:0,26:25:75.26:1197,75,0	1/1:1,26:27:78.24:1217,78,0	1/1:0,13:13:30.10:478,30,0	1/1:1,11:12:24.08:382,24,0
chr10	76368359	.	C	CT	1157.81	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.661;DP=574;FS=7.139;HRun=2;HaplotypeScore=53.9983;InbreedingCoeff=0.9903;MQ=89.72;MQ0=0;MQRankSum=-1.136;QD=38.59;ReadPosRankSum=-1.625;VQSLOD=3.3655;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:87.29:1253,87,0	0/0:8,0:8:24.08:0,24,298	0/0:24,0:24:60.84:0,61,835	0/0:22,0:21:18.47:0,18,650	0/0:25,0:25:72.23:0,72,892	0/0:22,0:22:63.20:0,63,781	0/0:19,0:19:54.17:0,54,670	0/0:34,0:34:93.28:0,93,1141	0/0:17,0:17:48.15:0,48,594	0/0:19,0:19:48.15:0,48,595	0/0:18,0:18:51.16:0,51,632	0/0:19,0:19:51.16:0,51,632	0/0:20,0:20:60.19:0,60,741	0/0:13,0:13:36.09:0,36,432	0/0:19,0:19:57.18:0,57,706	0/0:11,0:11:33.10:0,33,409	0/0:32,0:32:87.26:0,87,1065	0/0:29,0:29:78.24:0,78,965	0/0:24,0:24:72.21:0,72,872	0/0:21,0:21:60.19:0,60,744	0/0:16,0:16:48.15:0,48,595	0/0:20,0:20:54.17:0,54,669	0/0:22,0:22:63.18:0,63,768	0/0:13,0:13:39.12:0,39,484	0/0:22,0:22:63.20:0,63,780	0/0:25,0:25:75.22:0,75,908	0/0:15,0:15:45.14:0,45,558	0/0:15,0:15:42.09:0,42,502
chr10	76372435	.	TG	T	17562.78	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=15.432;DP=789;FS=0.584;HRun=3;HaplotypeScore=101.4980;InbreedingCoeff=1.0000;MQ=82.10;MQ0=2;MQRankSum=-4.413;QD=33.26;ReadPosRankSum=2.563;VQSLOD=4.8876;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,156,2114	1/1:1,16:17:48.15:593,48,0	0/0:22,0:22:61.83:0,62,859	0/0:21,0:20:59.56:0,60,787	1/1:0,26:26:78.20:949,78,0	1/1:1,17:18:48.15:594,48,0	1/1:1,25:26:63.20:779,63,0	1/1:2,32:33:96.24:1118,96,0	0/0:22,0:22:66.22:0,66,941	1/1:1,31:31:90.26:1101,90,0	1/1:0,22:22:63.20:780,63,0	0/0:41,0:41:99:0,120,1727	0/0:36,0:36:99:0,105,1490	1/1:1,47:48:99:1598,129,0	1/1:1,25:26:69.22:854,69,0	1/1:2,36:38:61.91:1218,62,0	1/1:2,27:29:64.43:915,64,0	1/1:0,29:29:81.25:1002,81,0	1/1:2,17:19:51.13:601,51,0	1/1:2,33:34:93.16:1113,93,0	1/1:1,23:24:57.18:706,57,0	0/0:21,0:21:63.21:0,63,901	0/0:25,0:25:69.23:0,69,989	0/0:21,0:21:63.20:0,63,885	1/1:1,30:31:84.26:1041,84,0	1/1:0,34:34:99:1226,102,0	1/1:1,26:27:72.23:891,72,0	1/1:0,13:13:39.12:483,39,0
chr10	76373680	.	AG	A	19781.78	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=12.573;DP=726;FS=2.126;HRun=1;HaplotypeScore=74.9875;InbreedingCoeff=0.9568;MQ=64.05;MQ0=2;MQRankSum=-0.935;QD=37.68;ReadPosRankSum=1.492;VQSLOD=5.4625;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.31:0,96,1509	1/1:0,22:22:63.21:881,63,0	0/1:15,0:12:0.09:0,0,367	0/0:20,2:16:21.78:0,22,447	1/1:0,21:21:57.19:783,57,0	1/1:0,16:16:48.16:671,48,0	1/1:0,21:21:48.16:671,48,0	1/1:0,29:29:84.20:1118,84,0	0/0:25,0:25:75.26:0,75,1199	1/1:1,43:44:99:1835,132,0	1/1:0,27:27:69.23:963,69,0	0/0:34,0:34:99:0,102,1626	0/0:30,0:30:90.27:0,90,1411	1/1:0,25:25:72.24:1007,72,0	1/1:0,38:38:99:1551,111,0	1/1:0,38:38:99:1468,105,0	1/1:0,18:18:54.18:755,54,0	1/1:0,14:14:39.13:545,39,0	1/1:2,30:32:45.36:1191,45,0	1/1:0,23:23:66.14:898,66,0	1/1:0,26:26:72.24:1007,72,0	0/0:23,0:23:66.21:0,66,1027	0/0:17,0:17:51.17:0,51,813	0/0:17,0:17:51.17:0,51,810	1/1:0,29:29:78.26:1091,78,0	1/1:0,38:38:99:1594,114,0	1/1:1,38:39:63.74:1460,64,0	1/1:0,10:10:21.07:293,21,0
chr10	76375462	.	C	CT	4477.98	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=0.140;DP=629;FS=0.770;HRun=7;HaplotypeScore=94.7473;InbreedingCoeff=0.9385;MQ=73.50;MQ0=8;MQRankSum=-7.163;QD=24.47;ReadPosRankSum=-0.681;VQSLOD=4.5650;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:72.07:0,72,683	0/0:13,0:13:33.04:0,33,314	0/0:44,0:21:8.71:0,9,87	0/0:38,0:16:8.24:0,8,59	1/1:7,20:27:60.16:697,60,0	0/0:19,0:19:57.05:0,57,535	0/0:16,0:16:39.03:0,39,366	0/0:38,0:38:87.09:0,87,822	0/0:16,0:16:48.07:0,48,459	0/0:21,0:21:60.07:0,60,567	0/0:22,0:21:57.06:0,57,539	0/0:24,0:24:57:0,57,522	0/0:14,0:14:41.93:0,42,367	0/0:29,0:29:57.05:0,57,539	0/0:22,0:22:60.05:0,60,561	0/0:17,0:17:39.04:0,39,371	0/0:30,0:30:72.09:0,72,688	1/1:6,6:12:32.93:313,33,0	1/1:7,11:18:41.70:495,42,0	1/1:13,16:28:63.12:710,63,0	1/1:2,5:7:18.04:203,18,0	0/0:16,0:16:39.02:0,39,359	0/0:20,0:20:54.01:0,54,504	0/0:14,0:14:27.03:0,27,261	1/1:5,16:21:57.14:662,57,0	1/1:16,9:25:42.08:458,42,0	1/1:13,15:28:60.12:666,60,0	1/1:11,5:16:0.39:273,0,0
chr10	76375488	.	TAA	T	7777.55	PASS	AB=0.779;AC=40;AF=0.714;AN=56;BaseQRankSum=2.765;DP=628;FS=2.251;HRun=12;HaplotypeScore=96.6705;InbreedingCoeff=0.7324;MQ=72.88;MQ0=16;MQRankSum=-2.635;QD=14.81;ReadPosRankSum=2.165;VQSLOD=3.9897;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:6,2:33:5.11:5,0,120	1/1:0,14:14:39.09:397,39,0	0/1:79,1:28:4.55:5,0,303	0/1:60,0:24:1.27:1,0,178	1/1:6,26:33:83.43:813,83,0	1/1:4,15:20:44.82:439,45,0	1/1:0,19:19:48.11:488,48,0	1/1:8,20:30:65.75:625,66,0	0/0:12,0:13:33.10:0,33,474	1/1:3,14:16:36.05:366,36,0	1/1:4,20:23:48.08:488,48,0	0/0:17,0:17:44.73:0,45,612	0/0:12,0:12:30.99:0,31,448	1/1:4,17:21:45.08:458,45,0	1/1:1,13:15:38.11:372,38,0	1/1:2,10:12:29.80:287,30,0	1/1:3,18:22:47.56:451,48,0	1/1:1,9:10:27.04:275,27,0	1/1:4,14:19:6.57:419,7,0	1/1:6,12:18:36.02:358,36,0	0/1:3,4:7:6.81:134,0,7	0/0:20,0:21:53.67:0,54,767	0/0:23,0:24:56.68:0,57,802	0/0:16,0:16:36.12:0,36,535	1/1:6,11:17:17.19:342,17,0	1/1:2,14:17:35.76:410,36,0	1/1:4,17:23:41.73:531,42,0	1/1:4,3:7:11.98:112,12,0
chr10	76375863	.	T	TGCAGATTTGTTCA	60247.35	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-9.822;DP=742;FS=4.456;HRun=0;HaplotypeScore=221.2640;InbreedingCoeff=0.9967;MQ=77.50;MQ0=0;MQRankSum=-19.845;QD=123.97;ReadPosRankSum=-0.122;VQSLOD=4.7960;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,5089	1/1:1,5:7:18.06:1191,18,0	0/0:28,0:28:78.24:0,78,2577	0/0:22,0:22:60.14:0,60,1739	1/1:9,23:43:84.22:4892,84,0	1/1:5,11:26:36.12:2213,36,0	1/1:5,8:17:33.11:1987,33,0	1/1:24,8:45:99:7012,132,0	0/0:25,0:25:72.22:0,72,2567	1/1:7,14:33:93.26:4968,93,0	1/1:5,15:27:54.18:3323,54,0	0/0:31,0:31:93.32:0,93,3737	0/0:28,0:28:72.25:0,72,2580	1/1:6,11:26:48.16:2991,48,0	1/1:11,18:34:84.29:4766,84,0	1/1:6,11:27:51.17:2786,51,0	1/1:4,15:25:51.17:2845,51,0	1/1:5,4:15:21.07:1243,21,0	1/1:4,4:16:45.15:2118,45,0	1/1:8,17:31:69.24:4348,69,0	1/1:5,3:12:18.06:1028,18,0	0/0:21,0:21:63.22:0,63,2202	0/0:25,0:25:66.21:0,66,2567	0/0:32,0:32:96.33:0,96,3734	1/1:5,8:20:39.13:2139,39,0	1/1:7,12:27:72.25:4111,72,0	1/1:12,19:33:72.25:4570,72,0	1/1:3,7:11:30.10:1717,30,0
chr10	76375865	.	C	CAGA	11477.14	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=19.892;DP=595;FS=3.585;HRun=0;HaplotypeScore=244.0117;InbreedingCoeff=0.9453;MQ=84.04;MQ0=0;MQRankSum=-19.596;QD=33.96;ReadPosRankSum=3.592;VQSLOD=5.2183;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,2460	1/1:6,1:7:18.06:262,18,0	0/0:28,0:28:84.16:0,84,1427	0/0:21,0:22:60.15:0,60,1033	1/1:33,0:32:72.76:1090,73,0	1/1:14,0:13:11.12:429,11,0	1/1:13,0:12:11.04:407,11,0	1/1:32,0:30:29.32:894,29,0	0/0:25,0:25:72.25:0,72,1328	1/1:24,1:25:17.11:824,17,0	1/1:18,1:18:51.17:715,51,0	0/0:32,0:32:93.32:0,93,1734	0/0:26,0:26:75.24:0,75,1367	1/1:18,0:18:45.15:618,45,0	1/1:25,1:26:75.24:1026,75,0	1/1:21,0:21:45.56:610,46,0	1/1:18,0:17:39.55:612,40,0	1/1:10,0:10:1.94:206,2,0	1/1:5,0:5:15.02:189,15,0	1/1:24,0:24:69.23:971,69,0	1/1:7,0:7:10.91:179,11,0	0/0:21,0:21:63.22:0,63,1174	0/0:23,0:23:69.21:0,69,1223	0/0:34,0:34:96.33:0,96,1790	1/1:13,0:13:36.11:466,36,0	1/1:18,0:18:54.08:693,54,0	1/1:27,0:25:51.25:959,51,0	1/1:8,0:8:24.08:330,24,0
chr10	76380578	.	CTTTCTTTCTTTCTTTCTT	C	5087.34	PASS	AB=0.783;AC=18;AF=0.321;AN=56;BaseQRankSum=7.860;DP=363;FS=4.362;HRun=0;HaplotypeScore=150.4995;InbreedingCoeff=0.7708;MQ=49.25;MQ0=9;MQRankSum=2.669;QD=31.21;ReadPosRankSum=-1.058;VQSLOD=3.9190;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:21.07:0,21,816	0/0:7,0:7:9.96:0,10,193	0/0:4,0:1:2.92:0,3,17	0/0:4,0:2:2.55:0,3,30	1/1:3,17:21:35.96:658,36,0	0/1:9,0:9:1.28:1,0,48	0/0:6,0:6:6:0,6,148	0/0:23,0:22:56.84:0,57,710	0/0:12,0:12:35.31:0,35,1520	0/0:13,0:11:27.76:0,28,510	0/0:12,0:12:29.35:0,29,591	0/0:13,0:12:36.02:0,36,2065	0/0:10,0:9:24.01:0,24,1098	0/0:11,0:10:30.04:0,30,818	0/0:16,0:15:39.35:0,39,846	0/0:12,0:12:15.03:0,15,467	0/0:18,0:15:30.02:0,30,604	0/1:3,10:13:5.20:298,0,5	1/1:7,14:22:42.61:1005,43,0	1/1:3,13:16:14.90:239,15,0	1/1:2,9:11:8.50:134,9,0	0/0:7,0:7:12.01:0,12,295	0/0:11,0:11:30.52:0,31,1851	0/0:8,0:8:21.06:0,21,867	1/1:1,15:17:18.06:621,18,0	1/1:3,17:20:41.47:1122,41,0	1/1:2,23:25:15.05:719,15,0	1/1:0,7:8:6.02:291,6,0
chr10	76380595	.	T	TTTC	58.70	PASS	AB=0.926;AC=8;AF=0.143;AN=56;BaseQRankSum=0.601;DP=424;FS=1.945;HRun=0;HaplotypeScore=103.0328;InbreedingCoeff=0.2408;MQ=45.49;MQ0=13;MQRankSum=-2.033;QD=0.65;ReadPosRankSum=1.084;VQSLOD=1.6885;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,6:19:23.82:85,0,24	0/0:7,0:7:5.64:0,6,34	0/0:6,0:2:2.96:0,3,19	0/1:6,0:1:0:0,0,0	0/0:23,0:23:2.98:0,3,22	0/0:11,0:11:3.68:0,4,15	0/0:8,0:8:2.75:0,3,20	0/0:24,0:23:15.14:0,15,168	0/0:18,0:18:25.28:0,25,334	0/0:16,0:14:19.36:0,19,103	0/0:17,0:16:17.97:0,18,100	0/0:19,0:18:41.89:0,42,313	0/0:11,0:10:20.74:0,21,158	0/0:13,0:11:28.94:0,29,225	0/0:15,0:14:22.34:0,22,195	0/0:16,0:16:17.79:0,18,124	0/0:21,0:18:26.62:0,27,166	0/0:12,0:12:2.16:0,2,20	0/1:24,0:24:11.24:26,0,11	1/1:21,0:21:8.55:50,9,0	1/1:12,0:12:1.46:4,1,0	0/1:8,0:7:6.58:7,0,35	0/0:14,0:14:22.31:0,22,187	0/0:10,0:9:17.24:0,17,186	0/0:19,0:19:13.73:0,14,83	0/0:20,0:19:4.21:0,4,43	0/0:25,0:24:14.90:0,15,107	0/0:9,0:9:5.96:0,6,43
chr10	76380790	.	T	TTTAC	7286.37	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=1.394;DP=650;FS=1.325;HRun=0;HaplotypeScore=120.5319;InbreedingCoeff=0.9769;MQ=60.65;MQ0=3;MQRankSum=-1.368;QD=32.82;ReadPosRankSum=-0.104;VQSLOD=4.9833;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,105,1606	0/0:3,0:11:17.55:0,18,167	0/0:14,0:10:8.18:0,8,111	0/0:12,0:8:16.59:0,17,169	1/1:3,31:34:77.61:1365,78,0	0/0:4,0:13:18.02:0,18,168	0/0:9,0:21:18.02:0,18,168	0/0:18,0:33:19.25:0,19,225	0/0:24,0:24:51.14:0,51,770	0/0:8,0:27:44.71:0,45,377	0/0:9,0:29:33.79:0,34,351	0/0:25,0:25:60.14:0,60,856	0/0:23,0:23:21.15:0,21,648	0/0:1,0:19:32.95:0,33,290	0/0:5,0:20:21.02:0,21,196	0/0:5,0:27:50.81:0,51,495	0/0:7,0:23:33.04:0,33,307	1/1:7,19:26:42.14:1019,42,0	1/1:19,0:15:14.88:110,15,0	1/1:4,23:27:68.63:1227,69,0	1/1:3,17:22:27.09:655,27,0	0/0:24,0:24:54.08:0,54,778	0/0:17,0:17:36.05:0,36,445	0/0:17,0:17:34.82:0,35,628	1/1:2,21:23:30.10:717,30,0	1/1:6,15:22:20.20:967,20,0	1/1:7,22:29:30.57:719,31,0	1/1:4,16:20:21.07:507,21,0
chr10	76381706	.	C	CGT	7686.19	PASS	AB=0.524;AC=19;AF=0.339;AN=56;BaseQRankSum=-11.843;DP=593;FS=4.060;HRun=0;HaplotypeScore=92.8191;InbreedingCoeff=0.9217;MQ=70.62;MQ0=5;MQRankSum=-1.246;QD=35.58;ReadPosRankSum=-0.469;VQSLOD=6.3848;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:88.11:0,88,1300	0/0:1,0:8:18.21:0,18,86	0/0:18,0:16:38.56:0,39,439	0/0:19,0:17:41.75:0,42,441	1/1:1,23:29:65.39:1006,65,0	0/0:3,0:30:72.85:0,73,317	0/0:1,0:21:25.48:0,25,154	0/0:12,0:34:50.71:0,51,518	0/0:9,0:9:26.66:0,27,348	0/0:6,0:26:60.08:0,60,378	0/0:6,0:18:23.23:0,23,224	0/0:24,0:24:72.19:0,72,1038	0/0:18,0:21:60.20:0,60,920	0/0:5,0:24:39.20:0,39,215	0/0:4,0:13:30.69:0,31,202	0/1:2,0:22:13.10:13,0,147	0/0:6,0:27:60.92:0,61,390	1/1:0,12:14:33:588,33,0	1/1:4,24:31:91.90:1369,92,0	1/1:2,18:20:44.91:760,45,0	1/1:0,12:15:33.07:554,33,0	0/0:13,0:12:30.08:0,30,483	0/0:17,0:18:50.89:0,51,747	0/0:22,0:22:66.19:0,66,1012	1/1:0,14:17:33.09:615,33,0	1/1:3,18:23:35.28:917,35,0	1/1:4,19:25:60.01:1083,60,0	1/1:1,13:18:45.09:781,45,0
chr10	76382037	.	A	AT	2281.14	PASS	AB=0.901;AC=21;AF=0.375;AN=56;BaseQRankSum=-2.597;DP=509;FS=10.085;HRun=12;HaplotypeScore=102.7418;InbreedingCoeff=0.7412;MQ=63.25;MQ0=15;MQRankSum=-3.243;QD=8.95;ReadPosRankSum=-4.519;VQSLOD=0.8555;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:23.30:0,23,155	1/1:5,1:6:11.76:100,12,0	0/0:38,1:8:0.46:0,0,25	0/1:47,0:16:30.53:31,0,36	0/0:20,0:21:29.25:0,29,178	1/1:13,2:15:26.96:241,27,0	1/1:16,3:19:4.57:169,5,0	1/1:22,4:27:20.61:350,21,0	0/0:10,0:10:11.88:0,12,85	1/1:18,7:26:25.91:381,26,0	0/1:8,4:13:1.04:139,0,1	0/0:16,0:15:23.79:0,24,170	0/1:15,0:15:2.66:3,0,135	1/1:14,2:16:17.53:118,18,0	1/1:18,4:22:27.88:202,28,0	1/1:15,4:19:23.39:331,23,0	1/1:22,7:29:23.18:420,23,0	0/0:21,0:24:49.72:0,50,320	0/0:13,0:15:34.27:0,34,203	0/0:10,0:12:20.58:0,21,139	0/0:10,0:11:20.19:0,20,125	0/0:6,0:6:8.93:0,9,66	0/0:15,0:15:17.76:0,18,125	0/0:13,0:12:23.86:0,24,175	0/0:7,0:12:29.05:0,29,183	0/0:14,0:14:35.23:0,35,212	0/0:13,0:14:7.08:0,7,141	0/0:5,0:12:26.91:0,27,143
chr10	76382052	.	G	GTT	1707.01	PASS	AB=0.914;AC=25;AF=0.446;AN=56;BaseQRankSum=-2.784;DP=605;FS=0.562;HRun=15;HaplotypeScore=87.9163;InbreedingCoeff=0.4709;MQ=56.31;MQ0=35;MQRankSum=-5.708;QD=4.84;ReadPosRankSum=-1.720;VQSLOD=-0.3701;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:27:15.97:153,16,0	1/1:6,2:8:2.39:66,2,0	0/0:68,0:9:0.95:0,1,80	0/1:62,0:16:7.78:8,0,61	0/0:20,0:22:25.49:0,25,158	1/1:12,2:21:23.98:239,24,0	1/1:10,1:16:7.56:52,8,0	1/1:23,5:29:3.92:231,4,0	0/0:8,0:8:8.01:0,8,53	1/1:19,4:25:32.35:296,32,0	1/1:10,1:15:18.50:127,19,0	0/1:16,0:17:14.25:14,0,16	0/1:12,0:12:14.24:14,0,38	0/1:7,2:14:0.40:146,0,0	1/1:17,6:23:11.97:126,12,0	1/1:15,2:19:28.39:220,28,0	1/1:24,5:31:1.50:190,1,0	0/0:22,0:25:2.66:0,3,112	0/0:21,0:19:27.34:0,27,187	0/0:17,0:16:17.25:0,17,113	0/0:8,0:8:8.42:0,8,50	0/0:9,0:9:8.73:0,9,71	0/0:10,0:13:2.63:0,3,63	0/0:13,0:12:8.68:0,9,71	0/0:16,0:15:27.94:0,28,146	0/1:19,0:22:10.55:11,0,134	0/0:15,0:14:7.58:0,8,50	0/0:14,0:12:19.92:0,20,114
chr10	76382340	.	TTCCTCCTCC	T	4633.85	PASS	AB=0.936;AC=26;AF=0.464;AN=56;BaseQRankSum=4.817;DP=658;FS=2.331;HRun=0;HaplotypeScore=187.8588;InbreedingCoeff=0.0660;MQ=53.25;MQ0=43;MQRankSum=-5.745;QD=9.94;ReadPosRankSum=-7.401;VQSLOD=1.5513;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:40:99:201,0,1565	0/1:9,0:9:46.99:47,0,320	0/0:13,0:7:2.17:0,2,52	0/0:10,0:9:6.01:0,6,59	1/1:10,20:27:50.77:610,51,0	0/1:17,0:14:15.88:16,0,882	0/1:32,0:32:33.94:34,0,898	0/1:32,0:26:99:178,0,167	0/0:31,0:28:66.06:0,66,2126	0/1:30,0:27:99:130,0,862	0/1:9,0:7:21.93:22,0,392	0/0:31,0:30:72:0,72,1900	0/0:19,0:19:34.92:0,35,1045	0/0:22,0:20:15.51:0,16,1351	0/1:18,0:17:44.46:44,0,575	0/1:24,0:24:18.88:19,0,1531	0/1:45,0:43:62.22:62,0,2540	0/1:8,13:20:14.80:79,0,15	1/1:16,14:21:41.84:567,42,0	1/1:4,16:19:26.93:520,27,0	1/1:11,24:31:5.98:76,6,0	0/0:16,0:15:42.04:0,42,1067	0/0:11,0:11:24.07:0,24,734	0/0:38,0:38:84.18:0,84,2737	1/1:5,12:16:7.02:551,7,0	0/1:9,16:23:65.41:467,0,65	1/1:5,17:22:27.09:766,27,0	1/1:5,3:8:8.95:242,9,0
chr10	76383132	.	T	TG	9692.14	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-14.876;DP=589;FS=11.089;HRun=0;HaplotypeScore=51.5700;InbreedingCoeff=0.9995;MQ=77.51;MQ0=0;MQRankSum=-1.334;QD=42.89;ReadPosRankSum=2.578;VQSLOD=4.7161;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,1466	0/0:13,0:13:39.12:0,39,530	0/0:19,0:19:44.63:0,45,685	0/0:9,0:9:27.09:0,27,376	1/1:0,25:25:72.25:1151,72,0	0/0:21,0:21:63.20:0,63,861	0/0:24,0:24:66.18:0,66,901	0/0:25,0:25:72.24:0,72,1000	0/0:17,0:17:51.17:0,51,711	0/0:14,0:14:42.14:0,42,574	0/0:10,0:10:27.08:0,27,358	0/0:28,0:28:84.25:0,84,1137	0/0:14,0:14:36.12:0,36,503	0/0:16,0:16:45.14:0,45,612	0/0:20,0:19:60.20:0,60,839	0/0:16,0:16:48.16:0,48,671	0/0:20,0:19:57.19:0,57,797	1/1:0,26:26:69.24:1103,69,0	1/1:2,31:33:96.27:1446,96,0	1/1:1,15:16:42.14:671,42,0	1/1:0,51:51:99:1916,120,0	0/0:17,0:17:51.17:0,51,713	0/0:15,0:15:39.13:0,39,546	0/0:27,0:27:81.23:0,81,1111	1/1:0,21:21:63.21:1007,63,0	1/1:0,25:25:75.26:1200,75,0	1/1:0,17:17:48.16:767,48,0	1/1:0,12:12:27.09:431,27,0
chr10	76383257	.	GAA	G	2128.63	PASS	AB=0.731;AC=25;AF=0.446;AN=56;BaseQRankSum=-6.516;DP=577;FS=4.636;HRun=16;HaplotypeScore=87.6570;InbreedingCoeff=0.4673;MQ=55.87;MQ0=14;MQRankSum=2.965;QD=6.03;ReadPosRankSum=4.241;VQSLOD=0.2212;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,3:42:29.82:30,0,158	1/1:4,1:5:8.87:67,9,0	0/0:30,1:3:2.98:0,3,22	0/0:27,0:6:3.48:0,3,32	0/1:18,2:25:37.43:37,0,198	1/1:15,7:22:31.24:255,31,0	1/1:15,13:28:11.21:181,11,0	1/1:10,14:24:28.28:298,28,0	0/0:14,0:14:31.25:0,31,335	1/1:9,17:28:38.73:382,39,0	0/1:12,1:14:33.13:41,0,33	0/0:20,0:21:43.86:0,44,425	0/0:15,0:15:18.91:0,19,170	1/1:5,5:11:17.20:135,17,0	1/1:7,9:18:32.32:246,32,0	1/1:15,9:26:24.46:263,24,0	1/1:16,11:26:29.12:340,29,0	0/0:10,0:16:27.24:0,27,161	0/0:28,1:30:3.84:0,4,139	0/1:11,2:22:26.25:26,0,45	0/0:11,0:12:17.71:0,18,89	0/0:12,0:12:25.60:0,26,254	0/0:14,0:13:21.88:0,22,232	0/0:13,0:14:25.50:0,26,246	0/0:10,0:15:14.40:0,14,92	0/1:13,1:19:0.29:0,0,118	0/1:24,2:29:2.50:3,0,176	0/1:3,1:9:20.79:21,0,30
chr10	76384033	.	GCA	G	4062.88	PASS	AB=0.798;AC=25;AF=0.446;AN=56;BaseQRankSum=10.741;DP=658;FS=1.222;HRun=0;HaplotypeScore=82.3957;InbreedingCoeff=-0.0194;MQ=64.87;MQ0=8;MQRankSum=1.949;QD=8.61;ReadPosRankSum=2.533;VQSLOD=3.4585;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,19:26:45.13:525,45,0	0/1:8,1:9:7.88:8,0,335	0/0:33,0:19:30.03:0,30,352	0/0:33,0:25:27.05:0,27,345	0/1:10,14:25:11.63:382,0,12	0/1:24,4:29:87.87:88,0,726	0/1:18,5:23:53.76:54,0,598	0/0:25,0:25:45.15:0,45,682	0/0:19,1:20:7.16:0,7,567	0/0:21,0:21:48.16:0,48,723	0/0:17,0:17:19.93:0,20,558	0/1:14,1:17:1.89:2,0,410	0/0:15,3:18:1.09:0,1,436	0/1:26,3:29:3.78:4,0,847	0/1:28,3:32:12.38:12,0,851	0/1:15,0:15:1.55:2,0,437	0/1:19,4:25:39.02:39,0,474	1/1:11,25:38:62.34:667,62,0	1/1:7,4:11:2.54:160,3,0	0/1:6,15:21:6.34:331,0,6	1/1:10,12:24:32.76:343,33,0	0/1:23,3:27:46.87:47,0,681	0/0:17,1:19:1.11:0,1,457	0/1:37,3:41:32.72:33,0,827	1/1:3,15:19:7.27:389,7,0	0/1:7,12:19:0.29:380,0,0	0/1:10,13:22:17.08:284,0,17	0/1:4,9:15:2.32:315,0,2
chr10	76384328	.	CA	C	8955.65	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.237;DP=717;FS=1.263;HRun=2;HaplotypeScore=67.1806;InbreedingCoeff=0.9998;MQ=74.11;MQ0=0;MQRankSum=-0.292;QD=35.82;ReadPosRankSum=0.707;VQSLOD=5.2729;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1833	1/1:0,11:11:27.09:351,27,0	0/0:39,0:39:99:0,114,1610	0/0:18,0:18:54.13:0,54,759	0/0:33,0:33:99:0,99,1445	1/1:1,23:24:60.20:779,60,0	1/1:0,22:22:60.20:779,60,0	1/1:0,41:41:99:1503,117,0	0/0:22,0:22:66.21:0,66,967	1/1:0,22:22:66.20:842,66,0	1/1:0,15:15:45.15:584,45,0	0/0:29,0:29:84.28:0,84,1259	0/0:21,0:21:60.20:0,60,899	1/1:0,23:23:66.21:857,66,0	1/1:0,23:23:66.21:857,66,0	1/1:1,30:31:45.32:1081,45,0	1/1:0,38:38:99:1324,102,0	0/0:23,0:23:63.21:0,63,944	0/0:21,0:21:63.20:0,63,908	0/0:19,0:19:57.17:0,57,814	0/0:22,0:22:63.21:0,63,941	0/0:28,0:28:81.27:0,81,1214	0/0:16,0:16:48.16:0,48,719	0/0:30,0:30:84.28:0,84,1259	0/0:28,0:28:84.26:0,84,1237	0/0:30,0:30:90.29:0,90,1314	0/0:31,0:31:93.30:0,93,1357	0/0:16,0:16:48.16:0,48,719
chr10	76385569	.	C	CA	12078.58	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-12.485;DP=608;FS=6.632;HRun=8;HaplotypeScore=59.8606;InbreedingCoeff=0.9210;MQ=79.69;MQ0=0;MQRankSum=-1.656;QD=26.31;ReadPosRankSum=3.413;VQSLOD=5.6138;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,30:34:78.23:900,78,0	1/1:2,5:7:15.04:173,15,0	0/0:26,0:25:33.04:0,33,367	0/1:11,0:11:7.15:7,0,63	1/1:3,25:28:75.04:809,75,0	1/1:0,13:13:36.11:415,36,0	1/1:3,12:15:27.08:312,27,0	1/1:6,24:31:72.06:764,72,0	0/0:16,0:16:41.99:0,42,375	1/1:1,23:25:72.03:801,72,0	1/1:0,11:11:32.99:349,33,0	0/0:22,0:22:57.02:0,57,522	0/0:23,0:23:62.99:0,63,565	1/1:3,24:27:63.19:727,63,0	1/1:3,14:17:36.11:416,36,0	1/1:3,21:23:57.17:658,57,0	1/1:3,35:38:78.23:900,78,0	1/1:5,34:39:87.26:1003,87,0	1/1:3,16:19:48.10:523,48,0	1/1:3,18:21:54.16:623,54,0	1/1:2,10:12:27.08:312,27,0	0/0:17,0:17:42.01:0,42,384	0/0:20,0:20:45.02:0,45,411	0/0:24,0:25:71.05:0,71,632	1/1:4,20:24:48.14:554,48,0	1/1:3,23:25:69.20:793,69,0	1/1:2,17:19:42.12:485,42,0	1/1:0,17:17:48.14:554,48,0
chr10	76386176	.	T	TTAAC	801.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.263;DP=736;FS=0.862;HRun=0;HaplotypeScore=121.1196;InbreedingCoeff=0.9144;MQ=65.19;MQ0=0;MQRankSum=-2.630;QD=26.72;ReadPosRankSum=-1.482;VQSLOD=3.0208;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,9:29:53.95:896,54,0	0/0:12,0:12:30.10:0,30,496	0/0:29,0:25:36.05:0,36,543	0/0:22,0:20:17.04:0,17,269	0/0:39,0:39:99:0,99,1553	0/0:23,0:23:57.18:0,57,915	0/0:27,0:27:51.17:0,51,839	0/0:36,0:36:72.18:0,72,1015	0/0:37,0:37:81.25:0,81,1284	0/0:35,0:35:63.19:0,63,962	0/0:29,0:29:63.19:0,63,981	0/0:28,0:28:69.21:0,69,1102	0/0:22,0:22:57.18:0,57,922	0/0:16,0:16:42.13:0,42,672	0/0:21,0:21:51.15:0,51,795	0/0:32,0:32:81.26:0,81,1321	0/0:22,0:22:54.16:0,54,868	0/0:33,0:33:9.57:0,10,1007	0/0:15,0:15:39.11:0,39,578	0/0:29,0:29:78.23:0,78,1204	0/0:18,0:18:51.16:0,51,803	0/0:30,0:30:66.20:0,66,1039	0/0:31,0:31:78.24:0,78,1240	0/0:19,0:19:42.07:0,42,608	0/0:26,0:26:66.20:0,66,1038	0/0:37,0:37:81.25:0,81,1270	0/0:30,0:30:72.23:0,72,1148	0/0:8,0:8:12.04:0,12,179
chr10	76386206	.	G	GAA	623.38	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.144;DP=710;FS=1.564;HRun=10;HaplotypeScore=89.1025;InbreedingCoeff=0.9491;MQ=71.08;MQ0=0;MQRankSum=-1.949;QD=24.94;ReadPosRankSum=-1.732;VQSLOD=3.3116;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:24:51.12:718,51,0	0/0:14,0:14:30.04:0,30,305	0/0:17,0:18:39.16:0,39,320	0/0:14,0:13:13.50:0,13,139	0/0:37,0:38:86.54:0,87,917	0/0:25,0:25:54.06:0,54,540	0/0:20,0:21:41.79:0,42,479	0/0:31,0:31:45.07:0,45,672	0/0:31,0:32:68.81:0,69,747	0/0:28,0:28:63.06:0,63,637	0/0:21,0:21:57.10:0,57,573	0/0:31,0:31:53.06:0,53,738	0/0:20,0:21:41.75:0,42,468	0/0:25,0:25:72.14:0,72,732	0/0:26,0:26:69.08:0,69,688	0/0:34,0:35:77.85:0,78,845	0/0:22,0:22:63.14:0,63,641	0/0:30,0:30:82.06:0,82,825	0/0:18,0:18:42.05:0,42,414	0/0:26,0:26:62.84:0,63,622	0/0:20,0:22:56.54:0,57,542	0/0:27,0:29:74.57:0,75,725	0/0:28,0:31:59.29:0,59,696	0/0:22,0:22:63.12:0,63,641	0/0:28,0:29:77.88:0,78,774	0/0:34,0:34:84.06:0,84,831	0/0:36,0:35:90.12:0,90,908	0/0:4,0:4:12.03:0,12,122
chr10	76386364	.	C	CA	472.13	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.546;DP=700;FS=0.864;HRun=9;HaplotypeScore=80.6615;InbreedingCoeff=0.9991;MQ=83.21;MQ0=0;MQRankSum=-2.509;QD=20.53;ReadPosRankSum=-0.165;VQSLOD=3.9160;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:23:52.38:567,52,0	0/0:20,0:20:59.93:0,60,508	0/0:28,0:28:45.71:0,46,465	0/0:25,0:25:29.93:0,30,225	0/0:32,0:32:77.98:0,78,677	0/0:22,0:22:53.98:0,54,469	0/0:23,0:23:62.98:0,63,547	0/0:39,0:39:99:0,102,881	0/0:29,0:29:65.96:0,66,573	0/0:25,0:25:59.96:0,60,521	0/0:17,0:17:41.97:0,42,361	0/0:28,0:28:77.97:0,78,674	0/0:28,0:28:71.96:0,72,625	0/0:21,0:21:53.99:0,54,469	0/0:30,0:30:86.97:0,87,755	0/0:37,0:37:98.97:0,99,860	0/0:14,0:14:35.99:0,36,313	0/0:21,0:21:53.98:0,54,468	0/0:19,0:19:44.98:0,45,390	0/0:34,0:34:92.98:0,93,807	0/0:25,0:25:62.98:0,63,547	0/0:14,0:14:38.98:0,39,338	0/0:31,0:31:86.98:0,87,755	0/0:13,0:13:35.99:0,36,313	0/0:26,0:26:68.97:0,69,599	0/0:36,0:36:89.95:0,90,778	0/0:24,0:24:53.98:0,54,469	0/0:15,0:15:44.99:0,45,391
chr10	76388662	.	G	GT	11940.96	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-14.640;DP=549;FS=1.205;HRun=7;HaplotypeScore=46.5495;InbreedingCoeff=0.9919;MQ=82.60;MQ0=0;MQRankSum=-3.607;QD=31.02;ReadPosRankSum=1.045;VQSLOD=5.0241;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.12:0,84,811	1/1:1,6:7:21.06:251,21,0	0/0:24,0:24:60.08:0,60,576	0/0:7,0:7:12.02:0,12,116	1/1:2,27:29:81.25:978,81,0	1/1:0,21:21:57.17:689,57,0	1/1:1,17:18:42.13:507,42,0	1/1:6,16:22:45.14:544,45,0	0/0:13,0:13:39.06:0,39,376	1/1:1,23:25:72.09:848,72,0	1/1:2,12:14:39.12:468,39,0	0/0:18,0:18:48.07:0,48,464	0/0:19,0:19:45.07:0,45,435	1/1:1,18:19:51.16:616,51,0	1/1:2,13:15:36.11:435,36,0	1/1:0,16:16:45.14:544,45,0	1/1:3,21:24:57.17:689,57,0	1/1:4,29:33:84.26:1015,84,0	1/1:3,11:14:33.10:399,33,0	1/1:2,30:32:90.28:1087,90,0	1/1:2,5:7:15.05:181,15,0	0/0:18,0:18:48.08:0,48,464	0/0:14,0:14:33.05:0,33,319	0/0:19,0:19:51.08:0,51,493	1/1:2,21:23:60.18:724,60,0	1/1:5,15:20:48.11:554,48,0	1/1:4,28:32:75.23:906,75,0	1/1:0,14:14:42.13:507,42,0
chr10	76389213	.	AT	A	4051.87	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=12.826;DP=441;FS=1.707;HRun=9;HaplotypeScore=43.0596;InbreedingCoeff=0.9594;MQ=76.49;MQ0=0;MQRankSum=-0.556;QD=22.76;ReadPosRankSum=0.616;VQSLOD=4.1305;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:24.07:0,24,277	1/1:2,5:7:15.01:137,15,0	0/0:9,0:9:14.83:0,15,120	0/0:10,0:11:12.01:0,12,116	0/0:12,0:11:36.11:0,36,415	1/1:2,24:26:72.04:659,72,0	1/1:1,9:10:27.01:247,27,0	1/1:5,24:30:42.40:614,42,0	0/0:13,0:13:30.09:0,30,346	1/1:3,24:27:72.03:659,72,0	1/1:3,17:20:51.03:467,51,0	0/0:15,0:15:39.12:0,39,450	0/0:8,0:8:21.05:0,21,232	1/1:1,8:9:24.01:220,24,0	1/1:2,15:18:41.06:363,41,0	1/1:1,13:14:36.01:329,36,0	1/1:2,15:17:39.01:357,39,0	0/0:20,0:20:54.10:0,54,588	0/0:17,0:17:45.11:0,45,495	0/0:22,0:22:60.18:0,60,690	0/0:15,0:15:36.10:0,36,407	0/0:11,1:12:2.63:0,3,284	0/0:15,0:15:42.12:0,42,485	0/0:6,0:6:15.04:0,15,173	0/0:19,0:19:57.16:0,57,650	0/0:19,1:20:29.70:0,30,596	0/0:24,0:24:66.20:0,66,762	0/0:13,0:13:36.11:0,36,415
chr10	76390334	.	ATT	A	1690.13	PASS	AC=30;AF=0.682;AN=44;BaseQRankSum=-2.364;DP=139;FS=0.000;HRun=4;HaplotypeScore=17.7769;InbreedingCoeff=0.6734;MQ=60.91;MQ0=6;MQRankSum=0.432;QD=17.07;ReadPosRankSum=1.296;VQSLOD=-0.0343;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:9:20.95:167,21,0	1/1:3,0:3:8.98:71,9,0	0/0:7,0:4:3.01:0,3,33	0/0:16,0:2:5.86:0,6,38	./.	./.	./.	1/1:9,5:12:10.90:249,11,0	./.	1/1:5,0:5:12.01:109,12,0	1/1:5,0:5:14.98:125,15,0	0/0:1,0:1:3:0,3,27	0/0:3,0:3:9.01:0,9,82	./.	1/1:2,0:2:5.99:50,6,0	1/1:4,0:4:5.99:50,6,0	1/1:14,0:14:18.10:235,18,0	1/1:14,0:13:32.85:254,33,0	1/1:2,0:2:3:27,3,0	1/1:8,0:8:14.98:125,15,0	1/1:3,0:3:5.95:42,6,0	0/0:4,0:4:12.01:0,12,111	0/0:3,0:3:6:0,6,54	0/0:1,0:1:3:0,3,26	1/1:4,0:4:11.98:98,12,0	1/1:3,0:3:6:54,6,0	1/1:8,0:8:23.93:189,24,0	./.
chr10	76390672	.	AGT	A	5022.27	PASS	AB=0.949;AC=30;AF=0.536;AN=56;BaseQRankSum=2.384;DP=742;FS=1.720;HRun=0;HaplotypeScore=132.1376;InbreedingCoeff=0.5327;MQ=58.86;MQ0=10;MQRankSum=1.799;QD=10.25;ReadPosRankSum=1.436;VQSLOD=4.6917;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:44:52.18:0,52,474	1/1:1,7:8:18.05:213,18,0	0/0:41,1:22:17.41:0,17,200	0/0:48,0:27:23.53:0,24,235	0/0:9,0:13:4.81:0,5,46	1/1:7,6:12:24.07:284,24,0	1/1:19,16:36:53.07:687,53,0	1/1:24,13:36:37.90:405,38,0	0/0:44,0:43:99:0,102,1608	1/1:14,10:24:53.82:585,54,0	1/1:1,6:7:14.71:153,15,0	0/1:37,4:41:13.32:13,0,1195	0/1:22,3:25:7.87:8,0,829	1/1:14,11:25:37.94:459,38,0	1/1:5,29:34:63.19:746,63,0	1/1:5,19:24:39.12:462,39,0	1/1:18,17:35:53.41:808,53,0	0/0:15,0:20:11.64:0,12,161	1/1:19,0:20:13.91:75,14,0	1/1:5,0:8:3.05:12,3,0	0/1:57,0:59:2.39:2,0,79	0/1:10,0:10:7.66:8,0,293	0/0:8,0:8:12.04:0,12,185	0/1:38,4:42:17.65:18,0,1213	0/0:7,0:13:9.16:0,9,69	0/1:30,1:37:82.04:82,0,184	0/0:12,0:15:7.98:0,8,94	0/0:1,0:4:6.47:0,6,53
chr10	76390694	.	TGA	T	1372.49	PASS	AB=0.989;AC=20;AF=0.357;AN=56;BaseQRankSum=5.480;DP=792;FS=20.495;HRun=0;HaplotypeScore=147.6553;InbreedingCoeff=-0.2496;MQ=53.10;MQ0=22;MQRankSum=0.467;QD=3.06;ReadPosRankSum=3.419;VQSLOD=1.5253;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,1:46:40:0,40,736	1/1:7,0:7:17.13:89,17,0	0/0:38,0:10:9.96:0,10,181	0/0:64,0:19:8.07:0,8,266	0/1:11,0:10:17.23:17,0,24	0/1:17,0:16:62.82:63,0,84	0/1:36,0:35:99:168,0,130	0/1:30,0:27:67.05:67,0,292	0/0:40,0:39:99:0,111,1954	0/1:27,0:26:65.02:65,0,172	0/1:8,0:8:20.39:41,0,20	0/0:39,0:39:76.51:0,77,1570	0/0:28,0:28:55.46:0,55,1124	0/1:19,0:19:9.72:121,0,10	1/1:36,0:36:11.66:165,12,0	0/1:30,0:30:95.10:95,0,120	0/1:39,0:39:85.21:202,0,85	0/1:18,1:19:44.48:44,0,253	0/1:17,1:17:48.58:49,0,180	0/1:9,0:9:32.06:73,0,32	0/1:72,2:72:52.07:52,0,570	0/0:16,0:16:37.83:0,38,565	0/0:8,0:8:23.99:0,24,252	0/0:52,1:53:64.51:0,65,1756	0/1:14,0:14:49.13:53,0,49	0/1:33,2:33:99:167,0,424	0/1:20,0:19:12.49:12,0,313	0/0:11,0:11:29.93:0,30,250
chr10	76390744	.	AGT	A	6528.79	PASS	AB=0.550;AC=17;AF=0.304;AN=56;BaseQRankSum=6.649;DP=883;FS=1.442;HRun=0;HaplotypeScore=163.9968;InbreedingCoeff=0.9084;MQ=63.83;MQ0=14;MQRankSum=0.979;QD=28.02;ReadPosRankSum=4.124;VQSLOD=6.0432;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:44.12:0,44,724	0/0:12,0:12:27.07:0,27,430	0/0:63,0:30:61.59:0,62,875	0/0:77,0:36:61.86:0,62,872	1/1:1,6:7:12.04:156,12,0	0/0:18,0:17:39.13:0,39,663	0/0:38,0:38:84.29:0,84,1429	0/0:32,0:32:90.26:0,90,1445	0/0:31,0:31:78.25:0,78,1300	0/0:34,0:34:93.32:0,93,1579	0/0:14,0:14:30.09:0,30,483	0/0:33,0:33:93.30:0,93,1555	0/0:30,0:30:84.27:0,84,1400	0/0:30,0:30:66.21:0,66,1082	0/0:24,0:24:27.09:0,27,459	0/0:29,0:29:48.16:0,48,816	0/0:40,0:40:95.50:0,95,1570	1/1:3,18:21:54.16:701,54,0	1/1:8,12:17:33.11:429,33,0	1/1:1,6:7:17.58:234,18,0	1/1:11,77:88:99:2184,168,0	0/0:21,0:21:63.22:0,63,1071	0/0:27,0:27:75.26:0,75,1275	0/0:54,0:54:99:0,129,2178	1/1:1,17:18:45.15:585,45,0	0/1:6,27:33:99:924,0,114	1/1:4,19:21:60.19:769,60,0	1/1:3,13:16:42.14:546,42,0
chr10	76390776	.	AGT	A	6713.36	PASS	AB=0.909;AC=21;AF=0.375;AN=56;BaseQRankSum=-1.194;DP=855;FS=0.678;HRun=0;HaplotypeScore=172.2999;InbreedingCoeff=0.9023;MQ=60.50;MQ0=9;MQRankSum=0.883;QD=22.68;ReadPosRankSum=2.302;VQSLOD=5.3665;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:43:5.40:0,5,17	1/1:1,8:9:21.07:267,21,0	0/0:47,0:19:27.41:0,27,342	0/0:52,0:25:32.92:0,33,603	0/0:10,0:10:27.09:0,27,451	1/1:4,14:18:30.10:382,30,0	1/1:4,33:37:71.93:916,72,0	1/1:9,21:28:57.17:710,57,0	0/0:29,0:29:78.25:0,78,1279	1/1:5,31:36:90.25:1101,90,0	1/1:2,11:13:24.03:305,24,0	0/0:43,0:43:99:0,114,1868	0/0:30,0:30:84.26:0,84,1345	1/1:3,34:37:27.93:904,28,0	1/1:3,19:22:36.12:458,36,0	1/1:6,18:24:36.11:458,36,0	1/1:5,35:40:93.30:1178,93,0	0/0:27,0:27:69.24:0,69,1153	0/0:22,0:20:54.15:0,54,846	0/0:10,0:9:27.09:0,27,452	0/0:79,0:77:99:0,150,2479	0/0:22,0:22:42.14:0,42,684	0/0:27,0:27:69.22:0,69,1124	0/0:49,0:49:99:0,117,1916	0/0:21,1:22:12.98:0,13,765	0/1:27,3:30:32.90:33,0,1085	0/0:27,0:26:66.23:0,66,1099	0/0:18,0:18:51.16:0,51,820
chr10	76393090	.	T	TACAC	3109.09	PASS	AB=0.887;AC=42;AF=0.840;AN=50;BaseQRankSum=-1.283;DP=517;FS=2.994;HRun=0;HaplotypeScore=115.8506;InbreedingCoeff=0.2856;MQ=71.25;MQ0=5;MQRankSum=0.269;QD=7.93;ReadPosRankSum=-0.361;VQSLOD=2.7101;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:12.04:217,12,0	1/1:8,0:8:9.02:130,9,0	./.	./.	1/1:14,0:14:2.72:47,3,0	1/1:17,0:17:12.04:267,12,0	1/1:25,4:30:6.02:122,6,0	1/1:17,0:16:1.82:5,2,0	0/1:19,0:19:34.33:34,0,83	1/1:13,0:13:10.28:199,10,0	1/1:12,1:16:2.99:38,3,0	0/0:9,0:11:2.69:0,3,28	./.	1/1:9,0:17:2.83:63,3,0	1/1:12,0:12:12.35:247,12,0	1/1:13,0:13:5.28:135,5,0	1/1:18,0:27:10.80:212,11,0	1/1:15,0:14:4.31:190,4,0	1/1:13,0:12:6.01:96,6,0	1/1:11,0:11:3.01:66,3,0	1/1:33,0:33:26.90:428,27,0	0/0:15,0:15:9.03:0,9,138	0/0:19,0:19:6.02:0,6,92	1/1:24,7:37:11.24:165,11,0	1/1:9,0:9:3.01:67,3,0	1/1:16,0:16:15.99:266,16,0	0/1:16,3:24:18.36:98,0,18	1/1:9,0:9:9:149,9,0
chr10	76397043	.	G	GTT	5774.49	PASS	AB=0.741;AC=37;AF=0.661;AN=56;BaseQRankSum=-1.593;DP=597;FS=8.635;HRun=13;HaplotypeScore=100.1879;InbreedingCoeff=0.6524;MQ=71.38;MQ0=4;MQRankSum=-1.461;QD=13.40;ReadPosRankSum=-2.968;VQSLOD=2.7445;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:42:76.40:0,76,666	1/1:7,5:12:17.54:209,18,0	0/1:20,0:12:8.68:9,0,49	0/0:14,0:10:5.51:0,6,36	1/1:7,2:26:37.83:236,38,0	1/1:5,13:20:23.57:294,24,0	1/1:2,10:16:29.35:338,29,0	1/1:14,20:37:72.12:888,72,0	0/0:13,0:13:26.92:0,27,233	1/1:5,14:22:48.87:512,49,0	1/1:4,1:11:11.52:119,12,0	0/0:12,0:15:26.20:0,26,253	0/0:12,0:14:2.18:0,2,211	1/1:6,11:18:22.88:277,23,0	1/1:5,17:25:48.15:585,48,0	1/1:4,15:20:1.55:413,2,0	1/1:7,18:32:64.99:714,65,0	1/1:2,3:16:36.31:196,36,0	1/1:13,2:23:2.60:125,3,0	0/1:9,2:23:42.87:148,0,43	1/1:3,0:14:12.48:43,12,0	0/0:26,0:28:42.12:0,42,395	0/0:17,0:19:33.95:0,34,280	0/0:20,0:21:50.59:0,51,434	1/1:8,1:24:30.46:136,30,0	1/1:5,2:29:59.47:381,59,0	0/1:8,0:24:42.66:59,0,43	1/1:5,1:13:17.98:93,18,0
chr10	76397082	.	GT	G	799.92	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.976;DP=534;FS=2.793;HRun=2;HaplotypeScore=64.6848;InbreedingCoeff=0.9888;MQ=85.55;MQ0=1;MQRankSum=-5.293;QD=28.57;ReadPosRankSum=1.825;VQSLOD=3.2945;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:68.96:895,69,0	0/0:10,0:9:27.09:0,27,405	0/0:22,0:21:63.21:0,63,897	0/0:15,0:15:37.94:0,38,528	0/0:24,0:24:69.23:0,69,1034	0/0:13,0:13:21.07:0,21,315	0/0:21,0:21:51.17:0,51,764	0/0:20,0:20:57.17:0,57,815	0/0:19,0:19:57.14:0,57,809	0/0:22,0:22:66.22:0,66,974	0/0:17,0:17:45.15:0,45,674	0/0:11,0:11:33.11:0,33,485	0/0:14,0:14:39.11:0,39,563	0/0:10,0:10:21.07:0,21,315	0/0:26,0:26:69.23:0,69,1033	0/0:20,0:20:48.16:0,48,720	0/0:17,0:17:48.16:0,48,718	0/0:12,0:12:33.11:0,33,495	0/0:19,0:19:54.18:0,54,810	0/0:16,0:16:48.16:0,48,719	0/0:15,0:15:30.10:0,30,450	0/0:33,0:33:99:0,99,1426	0/0:26,0:26:75.25:0,75,1118	0/0:23,0:23:69.23:0,69,1034	0/0:16,0:16:39.13:0,39,584	0/0:31,0:30:93.29:0,93,1370	0/0:24,0:24:63.21:0,63,944	0/0:10,0:10:27.09:0,27,400
chr10	76397139	.	CA	C	1169.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.247;DP=585;FS=9.866;HRun=2;HaplotypeScore=57.8064;InbreedingCoeff=0.9989;MQ=78.62;MQ0=1;MQRankSum=-4.866;QD=30.79;ReadPosRankSum=1.165;VQSLOD=2.3553;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:99:1265,99,0	0/0:11,0:10:30.10:0,30,449	0/0:11,0:11:32.93:0,33,405	0/0:17,0:17:38.94:0,39,515	0/0:27,0:27:78.26:0,78,1169	0/0:16,0:16:48.15:0,48,699	0/0:27,0:27:81.26:0,81,1193	0/0:22,0:22:66.22:0,66,971	0/0:27,0:27:81.27:0,81,1214	0/0:18,0:18:51.17:0,51,765	0/0:15,0:15:45.15:0,45,674	0/0:24,0:24:72.20:0,72,1054	0/0:21,0:21:60.19:0,60,878	0/0:17,0:17:51.17:0,51,764	0/0:35,0:35:99:0,102,1525	0/0:20,0:20:60.18:0,60,861	0/0:12,0:12:36.12:0,36,540	0/0:17,0:17:51.17:0,51,760	0/0:16,0:16:48.15:0,48,701	0/0:14,0:14:42.14:0,42,629	0/0:39,0:39:99:0,111,1661	0/0:22,0:22:66.22:0,66,989	0/0:19,0:19:54.17:0,54,788	0/0:20,0:20:57.19:0,57,854	0/0:14,0:14:39.13:0,39,585	0/0:25,0:25:75.25:0,75,1106	0/0:26,0:26:78.25:0,78,1144	0/0:15,0:15:42.14:0,42,629
chr10	76397983	.	TA	T	629.19	PASS	AB=0.946;AC=6;AF=0.107;AN=56;BaseQRankSum=0.917;DP=514;FS=3.846;HRun=11;HaplotypeScore=66.0615;InbreedingCoeff=0.2607;MQ=71.48;MQ0=1;MQRankSum=-0.343;QD=6.49;ReadPosRankSum=-1.172;VQSLOD=1.8028;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,35:40:59.95:688,60,0	0/0:8,0:8:24.04:0,24,240	0/1:14,1:12:3.72:4,0,129	0/1:14,0:9:14.49:14,0,49	0/0:28,0:28:61.49:0,61,347	0/0:23,0:23:57.13:0,57,595	0/0:15,1:16:17.46:0,17,384	0/0:30,0:30:69.15:0,69,721	0/0:5,0:5:12.01:0,12,114	0/0:24,0:24:66.16:0,66,698	0/1:9,2:11:28.23:28,0,139	0/0:17,0:17:45.10:0,45,472	0/0:16,0:16:45.06:0,45,460	0/0:15,0:15:30.03:0,30,297	0/0:11,0:11:33.08:0,33,352	0/0:12,0:12:27.04:0,27,276	0/0:26,0:26:72.14:0,72,748	0/1:17,0:17:19.15:19,0,158	0/0:24,0:24:51.99:0,52,255	0/0:20,1:21:27.79:0,28,264	0/0:14,1:15:20.95:0,21,190	0/0:19,0:21:42.81:0,43,398	0/0:15,0:15:8.80:0,9,259	0/0:8,0:8:24.05:0,24,249	0/0:19,0:19:51.74:0,52,272	0/0:30,0:30:64.50:0,65,360	0/0:26,0:25:61.35:0,61,361	0/0:7,0:7:14.06:0,14,97
chr10	76398111	.	AC	A	7694.49	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=2.263;DP=643;FS=1.004;HRun=1;HaplotypeScore=71.3730;InbreedingCoeff=0.9753;MQ=58.19;MQ0=5;MQRankSum=-2.195;QD=36.29;ReadPosRankSum=2.695;VQSLOD=5.3390;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,107,1490	0/0:11,0:11:32.70:0,33,446	0/0:25,0:12:36.11:0,36,515	0/0:24,0:14:33.87:0,34,539	1/1:5,20:25:73.45:957,73,0	0/0:18,0:18:54.06:0,54,721	0/0:22,0:22:63.18:0,63,882	0/0:36,0:36:99:0,105,1449	0/0:10,0:10:30.10:0,30,439	0/0:26,0:26:78.22:0,78,1065	0/0:17,0:17:51.17:0,51,738	0/0:20,0:20:60.19:0,60,854	0/0:15,0:15:45.15:0,45,655	0/0:14,0:14:42.04:0,42,567	0/0:17,0:17:51.13:0,51,688	0/0:14,1:15:3.77:0,4,553	0/0:44,0:45:99:0,132,1864	1/1:1,27:28:22.33:836,22,0	1/1:1,24:24:72.15:930,72,0	1/1:0,33:33:99:1319,99,0	1/1:0,22:22:63.21:880,63,0	0/0:32,0:32:93.25:0,93,1274	0/0:22,0:22:66.14:0,66,938	0/0:26,0:26:78.23:0,78,1100	1/1:0,12:12:33.10:447,33,0	1/1:0,27:27:81.14:1071,81,0	1/1:0,22:22:45.15:629,45,0	1/1:0,18:18:45.15:627,45,0
chr10	76398881	.	C	CACACCACACA	12512.81	PASS	AB=0.709;AC=50;AF=0.962;AN=52;BaseQRankSum=-0.100;DP=200;FS=27.065;HRun=0;HaplotypeScore=120.4710;InbreedingCoeff=-0.0996;MQ=41.19;MQ0=0;MQRankSum=-3.047;QD=64.17;ReadPosRankSum=1.839;VQSLOD=2.8102;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:18:33.11:1084,33,0	1/1:1,0:1:3.01:73,3,0	0/1:1,0:3:23.42:114,0,23	0/1:7,1:8:58.06:430,0,58	1/1:10,0:8:6:102,6,0	1/1:4,0:4:9.03:214,9,0	1/1:6,0:6:6.02:134,6,0	1/1:15,0:14:39.10:1444,39,0	1/1:12,0:12:33.03:1036,33,0	1/1:8,0:7:21.07:748,21,0	1/1:4,0:4:3:26,3,0	1/1:5,0:5:12.04:341,12,0	1/1:5,0:5:15.05:514,15,0	1/1:8,0:8:18.06:612,18,0	1/1:10,0:10:24.08:757,24,0	1/1:10,0:10:24.08:773,24,0	1/1:7,0:7:9.03:337,9,0	1/1:3,0:3:6.02:217,6,0	1/1:9,0:9:27.09:919,27,0	1/1:7,0:7:3.01:71,3,0	./.	1/1:6,0:6:9.03:270,9,0	1/1:5,0:4:3.01:71,3,0	1/1:3,0:3:2.99:24,3,0	1/1:11,0:11:27.09:916,27,0	1/1:9,0:7:21.07:904,21,0	1/1:6,0:6:12:384,12,0	./.
chr10	76398938	.	T	TAC	36.20	PASS	AB=0.982;AC=14;AF=0.280;AN=50;BaseQRankSum=1.482;DP=515;FS=3.869;HRun=0;HaplotypeScore=161.0891;InbreedingCoeff=0.0649;MQ=30.41;MQ0=12;MQRankSum=-3.841;QD=0.14;ReadPosRankSum=-0.272;VQSLOD=2.8638;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,1:16:9.90:0,10,117	1/1:7,0:6:1.74:5,2,0	0/1:20,0:5:4.84:5,0,48	./.	./.	0/1:23,2:24:28.54:29,0,216	0/0:30,1:28:11.93:0,12,124	0/1:34,1:20:18.82:19,0,259	0/0:18,0:16:20.33:0,20,140	0/1:41,1:30:39.49:39,0,369	0/1:10,0:8:0:0,0,0	0/0:27,0:22:10.76:0,11,106	0/0:20,0:19:17.50:0,18,157	0/0:32,0:28:1.89:0,2,15	0/0:24,1:24:11.71:0,12,140	0/0:20,0:20:11.96:0,12,137	0/1:16,1:17:32.31:32,0,90	0/0:6,0:6:10.86:0,11,36	0/0:11,0:9:2.56:0,3,19	0/1:10,0:9:0:0,0,0	1/1:23,0:20:2.50:9,2,0	0/1:25,0:20:0.48:1,0,0	0/0:22,1:20:6:0,6,63	0/1:22,0:21:0.37:0,0,1	./.	0/1:15,0:12:12.71:13,0,51	0/0:4,0:4:4.64:0,5,16	0/0:2,0:1:2.04:0,2,6
chr10	76398946	.	CACT	C	2158.30	PASS	AB=0.759;AC=21;AF=0.389;AN=54;BaseQRankSum=6.912;DP=668;FS=74.981;HRun=0;HaplotypeScore=181.7599;InbreedingCoeff=-0.2089;MQ=30.45;MQ0=21;MQRankSum=-6.894;QD=5.16;ReadPosRankSum=4.542;VQSLOD=0.3197;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,4:24:10.77:0,11,216	0/1:5,3:7:56.71:83,0,57	0/0:38,1:6:2.78:0,3,177	0/0:22,0:2:6.01:0,6,74	./.	0/0:25,6:29:29.64:0,30,604	0/0:28,10:34:18.14:0,18,459	0/1:40,8:28:99:332,0,854	0/1:14,9:21:99:223,0,296	0/1:50,12:47:99:232,0,1636	0/0:12,4:14:2.97:0,3,48	0/1:30,4:29:21.01:21,0,321	0/1:18,4:21:26.44:26,0,413	0/1:25,13:34:25.03:25,0,260	0/1:21,9:29:19.37:19,0,351	0/1:13,9:22:70.68:71,0,298	0/1:16,5:21:99:168,0,362	0/1:4,5:9:30.87:225,0,31	1/1:2,9:9:15.05:255,15,0	0/0:4,6:9:0:0,0,0	0/1:24,5:25:0:0,0,0	0/0:28,4:27:2.24:0,2,48	0/0:17,9:22:5.73:0,6,138	0/1:19,8:26:12.87:13,0,38	0/1:3,5:6:0:0,0,0	0/1:5,11:13:36.82:420,0,37	1/1:5,3:8:9.49:140,9,0	1/1:1,1:1:3.01:51,3,0
chr10	76398956	.	CACACAT	C	30.96	PASS	AB=0.980;AC=8;AF=0.148;AN=54;BaseQRankSum=5.218;DP=841;FS=2.742;HRun=0;HaplotypeScore=259.2043;InbreedingCoeff=-0.0506;MQ=31.47;MQ0=32;MQRankSum=-3.499;QD=0.13;ReadPosRankSum=-2.708;VQSLOD=1.8122;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:28:38.69:0,39,891	0/0:8,0:7:11.76:0,12,278	0/0:52,0:10:20.23:0,20,340	0/0:36,0:6:12.04:0,12,306	./.	0/0:33,0:31:51.16:0,51,1442	0/0:41,2:39:48.25:0,48,1439	0/0:63,1:41:33.49:0,33,2400	0/1:29,1:28:15.38:15,0,1334	0/1:76,1:62:6.60:7,0,3248	0/0:19,0:15:14.67:0,15,358	0/1:43,2:40:86.70:87,0,1138	0/0:27,0:26:32.28:0,32,945	0/0:49,1:40:16.10:0,16,907	0/0:32,1:30:30.37:0,30,794	0/0:28,0:28:44.01:0,44,980	0/1:24,0:22:17.68:18,0,888	0/0:10,0:10:15.27:0,15,349	0/1:22,0:19:9.78:10,0,436	1/1:13,0:11:0.47:1,0,0	0/0:36,0:32:8.48:0,8,112	0/0:34,2:32:2.30:0,2,124	0/0:32,0:28:23.20:0,23,633	0/1:31,1:31:6.30:6,0,393	0/0:10,0:8:9.02:0,9,165	0/0:22,0:19:45.15:0,45,1090	0/0:10,0:10:11.58:0,12,223	0/0:5,0:4:9.03:0,9,157
chr10	76398984	.	CACATACAT	C	160.18	PASS	AB=0.980;AC=11;AF=0.204;AN=54;BaseQRankSum=7.404;DP=1169;FS=18.231;HRun=0;HaplotypeScore=399.1523;InbreedingCoeff=-0.0919;MQ=33.77;MQ0=58;MQRankSum=-6.052;QD=0.41;ReadPosRankSum=-2.749;VQSLOD=0.7334;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:37:99:109,0,1960	0/0:14,0:11:21.16:0,21,334	0/0:74,0:17:38.93:0,39,962	0/0:79,0:13:27.22:0,27,694	./.	0/0:43,0:38:34.83:0,35,1660	0/0:61,0:55:77.31:0,77,2351	0/0:59,2:42:25:0,25,2635	0/1:36,2:33:64.48:64,0,1333	0/1:105,0:84:33.64:34,0,4428	0/0:30,0:26:20.44:0,20,600	0/1:57,4:54:26.51:27,0,2152	0/1:35,3:36:23.21:23,0,1893	0/0:64,0:54:57.28:0,57,1843	0/0:55,0:52:42.48:0,42,1581	0/1:49,0:46:8.33:8,0,1173	0/0:38,0:32:41.36:0,41,1118	0/1:8,0:8:16.08:16,0,178	0/1:19,0:17:3.58:4,0,239	1/1:14,0:12:0.47:1,0,0	0/0:50,0:44:0.89:0,1,4	0/0:53,0:49:24.86:0,25,1144	0/0:46,1:41:33.38:0,33,1151	0/0:49,0:48:49.33:0,49,1966	0/1:14,0:12:1.43:1,0,47	0/0:30,0:24:50.69:0,51,801	0/0:17,0:15:23.19:0,23,365	0/0:4,0:4:9.03:0,9,206
chr10	76398986	.	CAT	C	300.96	PASS	AB=0.901;AC=12;AF=0.231;AN=52;BaseQRankSum=9.069;DP=1171;FS=22.312;HRun=0;HaplotypeScore=353.9181;InbreedingCoeff=-0.1480;MQ=34.03;MQ0=59;MQRankSum=-8.254;QD=0.55;ReadPosRankSum=-3.591;VQSLOD=0.6635;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,1:38:9.87:0,10,848	0/1:13,1:11:21.67:22,0,135	0/0:76,0:19:41.36:0,41,622	0/0:79,0:14:27.35:0,27,454	./.	0/0:41,1:38:9.98:0,10,775	0/1:55,7:56:65.55:66,0,1015	0/1:61,1:45:0.19:0,0,1503	0/1:37,0:33:35.38:35,0,561	0/1:86,8:84:99:170,0,2060	0/0:22,3:26:20.71:0,21,330	0/0:53,7:54:13.05:0,13,961	0/1:37,3:37:23.71:24,0,870	0/1:55,7:55:30.33:30,0,784	0/1:48,6:52:24.88:25,0,732	0/1:44,5:46:23.59:24,0,555	0/0:36,3:33:21.43:0,21,564	0/1:6,0:8:0.09:0,0,127	0/0:13,1:12:8.04:0,8,121	./.	1/1:40,4:44:2.89:40,3,0	0/0:49,4:51:14.95:0,15,544	0/0:40,3:41:20.69:0,21,508	0/0:46,3:51:2.43:0,2,879	0/0:13,0:11:5.64:0,6,67	0/0:28,1:23:39.52:0,40,431	0/0:16,0:14:19.71:0,20,219	0/0:4,0:4:9.03:0,9,113
chr10	76399023	.	CCA	C	2604.27	PASS	AB=0.862;AC=17;AF=0.315;AN=54;BaseQRankSum=3.095;DP=1318;FS=30.804;HRun=0;HaplotypeScore=339.1441;InbreedingCoeff=-0.4502;MQ=32.41;MQ0=152;MQRankSum=-3.355;QD=2.80;ReadPosRankSum=-2.446;VQSLOD=1.2483;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,7:49:30.86:0,31,1020	0/1:15,2:14:55.81:56,0,117	0/1:59,0:4:0.01:0,0,0	0/0:71,0:5:12.04:0,12,171	./.	0/1:30,15:38:99:276,0,185	0/1:58,18:67:99:199,0,849	0/1:79,4:58:99:115,0,1046	0/1:40,6:36:99:119,0,323	0/1:97,14:84:99:452,0,1119	0/1:24,11:30:99:126,0,153	0/1:47,3:50:62.66:63,0,733	0/1:38,3:35:64.80:65,0,487	0/1:48,13:48:99:264,0,142	0/1:42,19:52:99:352,0,156	0/1:29,22:46:99:390,0,334	0/1:27,10:32:99:248,0,288	0/0:8,0:8:6.89:0,7,143	0/0:29,0:8:6.02:0,6,85	0/0:9,0:8:3.01:0,3,34	0/0:77,2:58:2.84:0,3,50	0/1:47,8:52:10.34:10,0,432	0/1:40,4:45:8.58:9,0,255	0/0:62,6:66:52.29:0,52,1025	0/0:20,0:14:7.21:0,7,73	0/1:25,1:19:7.37:7,0,377	0/0:13,0:10:14.90:0,15,246	0/0:3,0:3:6.02:0,6,99
chr10	76399045	.	CCA	C	885.50	PASS	AB=0.912;AC=20;AF=0.385;AN=52;BaseQRankSum=-1.264;DP=1128;FS=4.493;HRun=0;HaplotypeScore=277.8578;InbreedingCoeff=0.0697;MQ=31.37;MQ0=164;MQRankSum=-1.596;QD=1.47;ReadPosRankSum=2.672;VQSLOD=2.2726;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:41:50.52:0,51,726	0/0:13,0:11:12.04:0,12,165	0/0:44,1:2:6.01:0,6,67	0/0:59,1:4:2.97:0,3,20	./.	0/1:26,4:24:71.38:71,0,351	0/1:50,14:54:99:440,0,187	0/1:62,5:33:99:133,0,363	0/0:42,0:27:34.24:0,34,371	0/1:89,5:60:63.87:64,0,796	0/0:31,1:26:9.03:0,9,135	0/0:49,1:42:8.07:0,8,506	0/0:37,0:27:32.97:0,33,386	0/0:40,4:35:15.80:0,16,126	0/1:41,3:36:6.32:6,0,320	0/1:36,4:38:24.59:25,0,472	0/1:27,1:23:32.60:33,0,295	1/1:7,0:8:13.87:77,14,0	1/1:17,0:8:4.09:17,4,0	./.	1/1:59,3:58:2.57:14,3,0	0/1:51,0:41:4.70:5,0,349	0/0:43,0:34:15.88:0,16,238	0/0:72,1:70:94.10:0,94,1468	0/1:15,0:13:26.51:27,0,27	0/1:24,0:21:15.33:15,0,196	1/1:6,1:9:14.23:94,14,0	1/1:1,0:3:5.68:28,6,0
chr10	76399056	.	CACT	C	88.49	PASS	AB=0.981;AC=11;AF=0.204;AN=54;BaseQRankSum=5.961;DP=962;FS=1.660;HRun=0;HaplotypeScore=249.9054;InbreedingCoeff=0.2339;MQ=35.15;MQ0=131;MQRankSum=-3.057;QD=0.34;ReadPosRankSum=-2.418;VQSLOD=2.4699;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:31:24.24:0,24,893	0/0:10,0:9:12.02:0,12,181	0/0:43,0:5:9.02:0,9,104	0/0:55,0:8:4.92:0,5,101	./.	0/0:27,1:22:25.16:0,25,368	0/0:61,1:51:70.01:0,70,591	0/0:49,0:20:39.92:0,40,666	0/0:41,0:25:24.08:0,24,590	0/1:75,0:43:67.13:67,0,1010	0/0:25,0:20:12.02:0,12,237	0/0:41,1:34:26.24:0,26,665	0/1:30,2:21:17.61:18,0,577	0/1:38,0:29:42.53:43,0,211	0/0:37,0:29:28.80:0,29,364	0/0:37,0:33:52.95:0,53,809	0/0:25,0:21:26.24:0,26,451	0/1:10,0:6:4.63:16,0,5	0/1:12,0:4:1.71:31,0,2	0/1:14,0:7:0.25:0,0,0	1/1:67,1:49:2.84:24,3,0	0/0:41,0:33:21.13:0,21,603	0/0:37,0:29:11.31:0,11,294	0/0:71,1:68:72.41:0,72,2020	0/0:15,0:10:2.77:0,3,43	0/0:27,0:14:17.94:0,18,323	0/1:9,0:8:11.06:12,0,11	1/1:3,0:3:3.85:11,4,0
chr10	76399065	.	CCA	C	174.41	PASS	AB=0.913;AC=7;AF=0.135;AN=52;BaseQRankSum=4.598;DP=843;FS=7.921;HRun=0;HaplotypeScore=210.2167;InbreedingCoeff=0.2062;MQ=38.31;MQ0=101;MQRankSum=-3.395;QD=1.23;ReadPosRankSum=-1.534;VQSLOD=0.9813;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:27:30.08:0,30,470	0/0:6,0:6:3:0,3,27	0/0:53,0:7:11.92:0,12,129	0/1:58,0:14:0.52:1,0,104	./.	0/0:22,0:21:11.73:0,12,188	0/0:50,0:42:27.85:0,28,455	0/0:41,0:16:19.25:0,19,218	0/0:38,0:24:33.10:0,33,493	0/0:56,0:34:30.92:0,31,404	0/0:21,0:16:9.03:0,9,137	0/0:31,0:25:32.49:0,32,389	0/0:27,0:19:24.04:0,24,338	0/0:30,0:24:11.74:0,12,188	0/0:27,0:22:0.76:0,1,3	0/0:24,0:24:21.06:0,21,326	0/1:20,0:19:8.63:9,0,195	0/1:10,1:7:61.47:61,0,89	0/0:7,0:4:6.02:0,6,79	0/1:8,4:5:0:0,0,0	0/0:56,6:47:5.93:0,6,39	0/0:32,0:29:29.67:0,30,479	0/0:30,0:23:8.61:0,9,137	0/0:66,0:65:79.46:0,79,1342	1/1:12,2:10:9.59:115,10,0	0/1:22,3:13:79.13:99,0,79	0/0:9,0:8:3.29:0,3,78	./.
chr10	76399082	.	AC	A	3494.72	PASS	AB=1.000;AC=45;AF=0.865;AN=52;BaseQRankSum=-4.832;DP=622;FS=2.968;HRun=2;HaplotypeScore=146.8306;InbreedingCoeff=0.6213;MQ=50.98;MQ0=27;MQRankSum=-0.683;QD=7.16;ReadPosRankSum=3.190;VQSLOD=1.2602;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:22:18.92:215,19,0	./.	0/0:57,0:11:26.02:0,26,254	0/0:57,0:18:31.93:0,32,332	1/1:7,0:7:5.87:35,6,0	1/1:14,0:12:16.07:93,16,0	1/1:34,1:28:52.10:326,52,0	1/1:25,0:14:34.99:214,35,0	1/1:30,0:21:20.99:230,21,0	1/1:24,0:17:27.64:179,28,0	1/1:8,0:6:11.68:70,12,0	1/1:28,0:25:35.05:266,35,0	1/1:23,0:20:41.15:273,41,0	1/1:16,0:14:11.37:70,11,0	0/0:16,0:16:0.94:0,1,3	1/1:16,0:15:14.56:96,15,0	1/1:10,0:10:17.71:117,18,0	1/1:13,1:9:15.78:120,16,0	1/1:8,0:5:11.93:88,12,0	1/1:12,1:10:8.72:57,9,0	0/1:58,0:48:19.15:56,0,19	1/1:26,0:21:32.07:208,32,0	1/1:13,1:11:11.74:75,12,0	1/1:56,1:55:78.55:489,79,0	1/1:9,1:9:11.78:99,12,0	1/1:17,0:10:13.33:82,13,0	1/1:4,0:4:5.91:40,6,0	./.
chr10	76399084	.	CG	C	8258.76	PASS	AC=48;AF=0.923;AN=52;BaseQRankSum=-5.796;DP=579;FS=10.154;HRun=1;HaplotypeScore=129.0385;InbreedingCoeff=0.7846;MQ=52.35;MQ0=26;MQRankSum=-1.312;QD=17.84;ReadPosRankSum=0.778;VQSLOD=4.1378;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,23:22:45.14:612,45,0	./.	0/0:58,0:11:26.91:0,27,282	0/0:55,2:18:30.89:0,31,376	1/1:0,7:7:6.02:84,6,0	1/1:2,12:12:23.89:266,24,0	1/1:7,28:28:57.29:755,57,0	1/1:6,16:14:39.11:516,39,0	1/1:4,24:19:38.87:542,39,0	1/1:5,18:17:30.10:420,30,0	1/1:0,8:6:12.04:168,12,0	1/1:2,24:23:44.54:551,45,0	1/1:1,19:17:48.03:615,48,0	1/1:2,14:14:20.48:226,20,0	1/1:3,9:13:6.92:39,7,0	1/1:6,6:12:17.99:228,18,0	1/1:2,8:10:21.03:271,21,0	1/1:5,8:9:17.54:213,18,0	1/1:2,5:5:12.04:167,12,0	1/1:3,10:10:10.27:129,10,0	1/1:20,31:44:12.04:168,12,0	1/1:1,19:17:36.07:479,36,0	1/1:3,11:11:17.99:210,18,0	1/1:7,48:53:85.38:1156,85,0	1/1:6,3:8:15.04:187,15,0	1/1:3,11:9:14.88:182,15,0	1/1:0,2:2:6.02:78,6,0	./.
chr10	76399129	.	C	CCA	30.14	PASS	AB=0.921;AC=4;AF=0.071;AN=56;BaseQRankSum=4.324;DP=1056;FS=1.079;HRun=0;HaplotypeScore=221.0896;InbreedingCoeff=0.2742;MQ=40.81;MQ0=49;MQRankSum=-3.598;QD=0.48;ReadPosRankSum=-1.290;VQSLOD=2.2616;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,1:47:78.73:0,79,973	1/1:4,1:3:6.02:93,6,0	0/0:56,0:11:14.52:0,15,140	0/0:53,0:7:0.89:0,1,2	0/0:20,0:18:18.06:0,18,225	0/0:30,0:25:5.22:0,5,259	0/0:74,0:68:72.68:0,73,1294	0/0:58,0:44:81.26:0,81,1031	0/0:42,1:37:53.34:0,53,624	0/0:59,0:49:69.68:0,70,947	0/0:15,0:13:12.04:0,12,153	0/0:34,0:32:57.14:0,57,697	0/1:27,3:28:13.20:13,0,487	0/0:39,0:37:4.96:0,5,475	0/0:29,0:25:32.76:0,33,393	0/0:25,0:23:13.17:0,13,359	0/0:35,1:34:18.38:0,18,742	0/0:15,0:12:27.08:0,27,330	0/0:50,0:34:45.13:0,45,546	0/0:15,0:12:6.02:0,6,76	0/0:110,1:94:57.32:0,57,694	0/1:26,2:25:25.99:26,0,225	0/0:26,1:24:24.03:0,24,287	0/0:65,0:64:84.82:0,85,1057	0/0:26,0:23:18.94:0,19,345	0/0:40,0:29:44.61:0,45,524	0/0:3,0:3:5.97:0,6,57	0/0:4,0:3:3.01:0,3,36
chr10	76399222	.	CCACACA	C	104.37	PASS	AB=0.744;AC=3;AF=0.058;AN=52;BaseQRankSum=4.222;DP=775;FS=4.029;HRun=0;HaplotypeScore=175.5040;InbreedingCoeff=0.1630;MQ=37.01;MQ0=84;MQRankSum=-3.565;QD=3.16;ReadPosRankSum=-3.228;VQSLOD=2.1405;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,9:24:19.70:177,0,20	0/0:11,0:10:18.06:0,18,547	0/0:48,0:4:6.02:0,6,161	0/0:61,0:2:5.91:0,6,83	0/0:9,0:3:3.01:0,3,99	0/0:36,0:32:57.42:0,57,1408	0/0:43,0:39:86.90:0,87,2684	0/0:53,0:45:99:0,99,2689	0/0:35,0:27:23.59:0,24,1100	0/0:56,0:46:99:0,114,3329	0/0:11,0:10:18.04:0,18,407	0/0:35,0:32:69.19:0,69,2078	0/0:15,0:13:24.05:0,24,636	0/0:30,0:28:48.16:0,48,1408	0/0:16,0:13:3.38:0,3,196	0/0:20,0:18:42.13:0,42,1080	0/0:34,0:33:62.12:0,62,2258	0/0:4,0:2:6.02:0,6,94	0/0:26,0:10:3.01:0,3,102	./.	0/0:59,0:36:3.23:0,3,80	0/0:30,0:27:45.02:0,45,1099	0/0:20,0:18:36.07:0,36,946	0/0:58,0:57:89.01:0,89,3241	1/1:4,0:3:2.60:10,3,0	0/0:13,0:6:6.02:0,6,104	./.	0/0:2,0:1:3.01:0,3,103
chr10	76399259	.	C	CCACA	4946	PASS	AB=0.847;AC=18;AF=0.360;AN=50;BaseQRankSum=-1.810;DP=822;FS=2.935;HRun=0;HaplotypeScore=149.0428;InbreedingCoeff=0.0152;MQ=36.65;MQ0=129;MQRankSum=-1.313;QD=11.92;ReadPosRankSum=-0.784;VQSLOD=4.3889;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:35:99:100,0,163	0/1:12,5:18:9.05:9,0,46	0/0:59,0:6:6.02:0,6,92	0/0:63,0:4:6:0,6,65	./.	1/1:14,9:18:20.16:582,20,0	1/1:34,14:47:33.73:1266,34,0	0/1:63,2:25:28.49:215,0,28	0/1:28,0:25:21.85:22,0,427	0/1:44,5:36:5.91:652,0,6	0/1:6,2:8:67.78:137,0,68	0/0:37,0:34:4.03:0,4,757	0/0:24,0:16:4.38:0,4,550	0/1:25,8:25:11.27:413,0,11	0/1:13,2:13:8:176,0,8	1/1:15,5:17:28.34:595,28,0	0/1:19,8:29:51.74:725,0,52	0/0:1,0:1:2.94:0,3,18	./.	./.	0/0:46,0:28:1.23:0,1,3	0/0:38,0:31:13.78:0,14,728	0/0:25,0:18:21.07:0,21,356	0/0:65,0:68:96.19:0,96,1555	1/1:6,0:4:5.89:40,6,0	0/1:14,0:6:13.92:14,0,46	0/0:1,0:1:2.92:0,3,17	0/0:2,0:2:2.96:0,3,19
chr10	76399264	.	C	CAT	404.06	PASS	AB=0.969;AC=12;AF=0.231;AN=52;BaseQRankSum=7.519;DP=929;FS=0.578;HRun=0;HaplotypeScore=171.1365;InbreedingCoeff=-0.0880;MQ=35.13;MQ0=166;MQRankSum=-2.344;QD=1.02;ReadPosRankSum=5.039;VQSLOD=1.7901;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:49,1:39:99:135,0,312	0/1:20,1:19:37.63:38,0,100	0/0:56,0:5:9.01:0,9,111	0/0:58,0:4:5.89:0,6,67	./.	0/1:28,1:22:13.99:14,0,18	0/1:48,3:46:99:123,0,192	0/1:76,3:30:1.44:1,0,311	0/1:39,0:31:49.15:49,0,451	0/0:65,1:46:13.36:0,13,604	0/0:13,1:10:11.69:0,12,143	0/0:45,0:37:43.69:0,44,883	0/0:29,1:19:30.14:0,30,597	0/1:34,2:26:54.16:54,0,105	0/1:18,1:15:2.70:3,0,67	1/1:21,1:17:8.48:90,8,0	0/1:37,0:34:19.32:19,0,249	0/0:1,0:1:1.82:0,2,5	0/0:23,0:6:4.16:0,4,31	./.	0/0:59,0:34:0.34:0,0,1	0/0:43,0:36:57.46:0,57,858	0/0:25,0:17:35.89:0,36,431	0/0:80,1:73:99:0,124,1650	0/1:12,0:6:11.55:12,0,20	0/0:16,0:5:3.01:0,3,46	0/0:1,0:1:0.47:0,0,1	0/0:2,0:2:3.46:0,3,25
chr10	76399281	.	CCACA	C	375.99	PASS	AB=0.951;AC=10;AF=0.185;AN=54;BaseQRankSum=3.786;DP=974;FS=1.897;HRun=0;HaplotypeScore=172.3324;InbreedingCoeff=0.3975;MQ=34.65;MQ0=176;MQRankSum=-3.645;QD=2.01;ReadPosRankSum=-3.660;VQSLOD=2.0523;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:45:83.37:0,83,1863	0/0:14,0:12:6.49:0,6,155	0/0:39,0:2:3.90:0,4,40	0/1:48,0:1:0:0,0,0	./.	0/0:39,0:31:46.03:0,46,988	0/0:62,0:52:63.74:0,64,1708	0/0:89,0:35:82.16:0,82,1868	0/0:42,0:34:71.82:0,72,1531	0/0:61,0:37:89.85:0,90,1987	0/0:17,0:12:18.06:0,18,463	0/0:43,0:35:68.14:0,68,1536	0/0:34,0:24:60.20:0,60,1401	0/0:35,0:23:30.04:0,30,661	0/0:18,0:15:26.96:0,27,638	0/0:25,0:20:42.09:0,42,911	0/0:35,0:33:45.95:0,46,1643	0/0:2,2:4:3.01:0,3,64	0/1:26,1:10:38.96:39,0,216	0/0:2,1:2:3.01:0,3,77	1/1:52,15:37:3.51:52,4,0	0/0:43,0:34:63.20:0,63,1384	0/0:27,0:17:36.12:0,36,773	0/0:83,0:75:57.73:0,58,2310	0/1:11,2:7:67.96:79,0,68	0/1:18,1:7:99:110,0,149	1/1:1,1:2:6.02:94,6,0	1/1:2,1:3:9.03:138,9,0
chr10	76399348	.	CCA	C	67.22	PASS	AB=0.968;AC=11;AF=0.212;AN=52;BaseQRankSum=7.094;DP=1199;FS=11.617;HRun=0;HaplotypeScore=205.6489;InbreedingCoeff=0.0336;MQ=34.23;MQ0=230;MQRankSum=-5.856;QD=0.20;ReadPosRankSum=-2.664;VQSLOD=1.5710;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:68,0:55:64.57:0,65,1266	0/0:10,0:6:13.29:0,13,195	./.	./.	0/1:21,0:10:11.93:12,0,58	0/0:43,0:34:58.34:0,58,845	0/0:91,2:76:38.89:0,39,1366	0/0:83,0:29:28.76:0,29,619	0/0:42,0:31:42.96:0,43,663	0/0:77,0:46:75.45:0,75,1307	0/0:26,0:11:9.03:0,9,137	0/0:51,0:33:55.14:0,55,1052	0/1:29,1:22:7.91:8,0,502	0/0:43,0:32:41.23:0,41,649	0/0:38,0:25:24.06:0,24,338	0/0:30,0:25:52.01:0,52,755	0/0:42,0:35:60.17:0,60,928	0/1:16,0:12:1.31:1,0,166	0/0:35,0:14:12.55:0,13,299	0/1:16,1:12:24.86:25,0,52	0/1:118,3:75:54.99:55,0,270	0/0:39,0:27:50.99:0,51,807	0/1:31,1:24:6.70:7,0,553	0/0:71,0:62:47.13:0,47,955	0/1:33,2:21:0.83:1,0,92	0/1:34,0:20:49.16:49,0,276	0/1:11,0:7:2.51:3,0,5	1/1:8,0:6:7.67:35,8,0
chr10	76399376	.	ACAC	A	51.40	PASS	AB=0.964;AC=10;AF=0.179;AN=56;BaseQRankSum=7.186;DP=1350;FS=18.178;HRun=0;HaplotypeScore=206.9241;InbreedingCoeff=-0.0562;MQ=33.99;MQ0=268;MQRankSum=-5.600;QD=0.11;ReadPosRankSum=-4.588;VQSLOD=0.2481;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:77,4:61:0.64:0,1,1178	0/0:20,0:9:15.05:0,15,324	1/1:38,0:1:1.55:4,2,0	0/0:47,0:4:8.80:0,9,153	0/0:18,0:7:6.02:0,6,110	0/1:51,1:36:15.83:16,0,1160	0/1:104,6:87:49.12:49,0,2366	0/0:119,1:49:52.69:0,53,2297	0/1:41,0:28:13.84:14,0,809	0/1:90,7:58:51.25:51,0,2506	0/0:19,1:11:15.05:0,15,303	0/0:59,0:36:84.16:0,84,1646	0/1:24,3:20:7.69:8,0,744	0/0:41,1:32:4.36:0,4,1047	0/0:36,1:24:8.99:0,9,366	0/1:31,1:25:11.12:11,0,717	0/1:39,1:27:22.45:22,0,963	0/0:18,0:12:23.67:0,24,386	0/0:48,0:14:30.10:0,30,570	0/1:18,0:9:0.19:0,0,0	0/0:137,0:78:35.97:0,36,687	0/0:37,0:24:39.57:0,40,799	0/0:37,0:22:45.14:0,45,976	0/0:66,0:53:46.93:0,47,1664	0/0:43,0:21:12.38:0,12,308	0/0:47,0:15:36.01:0,36,633	0/0:8,0:4:5.76:0,6,54	0/0:8,0:4:2.53:0,3,67
chr10	76399428	.	CCA	C	55.67	PASS	AB=0.981;AC=8;AF=0.154;AN=52;BaseQRankSum=4.643;DP=1071;FS=19.526;HRun=0;HaplotypeScore=174.5595;InbreedingCoeff=-0.0839;MQ=32.47;MQ0=187;MQRankSum=-3.760;QD=0.19;ReadPosRankSum=-2.392;VQSLOD=1.3005;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:63,2:51:23.43:23,0,141	0/0:12,0:6:3.01:0,3,37	0/0:74,0:2:6.02:0,6,68	0/0:82,0:4:9.50:0,9,112	./.	0/0:38,0:30:35.82:0,36,355	0/0:75,0:56:35.72:0,36,620	0/0:84,0:55:54.03:0,54,652	0/0:27,0:18:27.02:0,27,412	0/0:59,0:38:42.01:0,42,586	0/0:18,1:9:1.76:0,2,6	0/0:46,0:37:77.22:0,77,1121	0/0:25,0:18:5.78:0,6,501	0/0:34,0:24:15.05:0,15,149	0/1:29,0:20:21.24:21,0,112	0/1:30,0:21:26.58:27,0,207	0/0:29,0:23:31.76:0,32,243	0/0:12,0:7:2.60:0,3,10	0/1:30,0:12:23.42:23,0,82	0/0:19,2:11:2.88:0,3,49	0/1:83,1:55:32.08:32,0,53	0/0:22,0:15:36.12:0,36,571	0/0:30,0:22:51.08:0,51,732	0/0:51,0:40:41.20:0,41,1067	1/1:29,0:17:0.29:1,0,0	0/1:23,2:13:45.06:46,0,45	0/0:8,0:2:5.75:0,6,46	./.
chr10	76399482	.	T	TAC	161.17	PASS	AB=0.972;AC=6;AF=0.111;AN=54;BaseQRankSum=5.534;DP=847;FS=0.000;HRun=0;HaplotypeScore=158.3794;InbreedingCoeff=0.2444;MQ=41.00;MQ0=73;MQRankSum=-5.001;QD=1.16;ReadPosRankSum=0.268;VQSLOD=2.4814;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:47:87.19:0,87,1097	0/0:10,0:6:9.03:0,9,115	0/0:54,0:2:3.01:0,3,36	0/0:58,0:6:14.90:0,15,150	./.	0/0:33,1:30:53.85:0,54,685	0/0:43,1:41:85.19:0,85,983	0/0:66,0:49:99:0,119,1458	0/0:26,0:25:57.16:0,57,704	0/0:37,0:31:80.83:0,81,950	0/0:14,0:10:15.03:0,15,193	0/0:30,0:28:74.85:0,75,919	0/0:33,0:31:84.24:0,84,1044	0/0:33,0:30:11.52:0,12,517	0/0:33,0:29:54.12:0,54,652	0/0:24,0:20:30.04:0,30,367	0/1:37,2:35:99:103,0,733	1/1:12,1:10:0.80:112,1,0	0/0:34,0:11:2.85:0,3,14	0/0:13,4:10:7.77:0,8,62	0/1:59,1:39:0.03:0,0,0	0/0:20,0:20:48.13:0,48,584	0/0:30,0:29:45.90:0,46,701	0/0:44,0:41:81.26:0,81,1038	0/1:7,0:6:0.11:0,0,0	0/1:18,1:13:16.99:44,0,17	0/0:6,0:5:5.04:0,5,34	0/0:3,0:3:3:0,3,28
chr10	76399492	.	CCA	C	111.41	PASS	AB=0.693;AC=8;AF=0.148;AN=54;BaseQRankSum=5.127;DP=833;FS=0.000;HRun=0;HaplotypeScore=150.5254;InbreedingCoeff=0.3792;MQ=42.72;MQ0=69;MQRankSum=-5.237;QD=1.86;ReadPosRankSum=-2.373;VQSLOD=2.2029;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,1:53:99:0,107,2001	0/0:10,0:7:12.04:0,12,222	0/0:54,1:2:2.88:0,3,16	0/0:48,1:7:17.99:0,18,187	./.	0/0:31,1:30:74.05:0,74,1320	0/0:52,0:49:99:0,100,1936	0/0:69,0:56:99:0,144,2750	0/0:25,0:26:72.06:0,72,1291	0/0:42,0:37:96.23:0,96,1856	0/0:14,1:9:15.05:0,15,293	0/0:36,0:33:90.29:0,90,1679	0/0:33,1:33:96.28:0,96,1755	0/0:28,1:27:50.49:0,50,949	0/0:32,0:29:70.43:0,70,1257	0/0:20,1:19:33.05:0,33,596	0/0:38,0:34:84.87:0,85,1546	0/1:6,5:9:14.45:14,0,76	0/0:20,2:8:3.31:0,3,14	0/1:10,6:10:3.99:57,0,4	0/0:29,18:30:0.89:0,1,2	0/0:24,0:24:62.23:0,62,1082	0/0:27,0:26:68.25:0,68,1230	0/0:44,0:40:91.41:0,91,1806	0/1:2,4:5:0:0,0,0	0/1:11,6:9:23.77:95,0,24	1/1:2,4:5:2.94:32,3,0	1/1:2,1:3:3.01:32,3,0
chr10	76399520	.	ACACACATAC	A	159.60	PASS	AB=0.973;AC=8;AF=0.154;AN=52;BaseQRankSum=6.596;DP=841;FS=11.261;HRun=0;HaplotypeScore=226.1408;InbreedingCoeff=0.2565;MQ=48.03;MQ0=30;MQRankSum=-5.877;QD=1.11;ReadPosRankSum=-3.251;VQSLOD=0.9955;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,2:52:3.60:0,4,3704	0/0:13,0:11:27.09:0,27,1202	0/0:52,0:6:18.06:0,18,369	0/0:49,0:9:4.15:0,4,238	./.	0/0:36,0:35:80.63:0,81,3346	0/1:55,3:51:99:135,0,4563	0/0:77,0:62:99:0,138,4544	0/1:25,1:25:9.12:9,0,2385	0/0:57,0:54:99:0,153,6010	0/0:11,0:9:11.93:0,12,477	0/0:51,0:49:99:0,144,6235	0/0:31,0:31:90.28:0,90,3702	0/0:34,0:32:65.37:0,65,2963	0/0:34,0:34:72.18:0,72,2964	0/0:21,0:20:45.13:0,45,1768	0/1:46,1:41:75.61:76,0,3247	0/0:7,0:3:6.02:0,6,68	./.	1/1:6,0:4:2.88:20,3,0	0/0:36,0:23:5.95:0,6,32	0/0:32,0:32:84.27:0,84,3692	0/0:30,0:27:21.35:0,21,2337	0/0:52,0:48:99:0,109,4838	0/1:3,0:3:0:0,0,0	0/0:6,0:2:5.85:0,6,36	1/1:3,0:3:3.01:36,3,0	0/0:2,0:2:5.60:0,6,36
chr10	76399547	.	CCATACACA	C	370.76	PASS	AB=0.689;AC=9;AF=0.167;AN=54;BaseQRankSum=5.350;DP=774;FS=10.941;HRun=0;HaplotypeScore=205.2749;InbreedingCoeff=0.4532;MQ=49.39;MQ0=30;MQRankSum=-4.763;QD=11.24;ReadPosRankSum=-2.538;VQSLOD=1.3904;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:48:97.21:0,97,2653	0/0:11,0:11:30.10:0,30,1043	0/0:38,0:8:15.02:0,15,423	0/0:41,0:8:4.90:0,5,121	./.	0/0:34,0:34:69.90:0,70,2533	0/0:57,0:50:99:0,122,3822	0/0:51,0:46:99:0,120,4174	0/0:25,0:25:65.71:0,66,2407	0/0:59,0:56:99:0,151,5266	0/0:11,0:11:27.09:0,27,1063	0/0:54,0:53:99:0,144,5415	0/0:30,0:29:81.28:0,81,2955	0/0:27,0:26:60.10:0,60,2485	0/0:29,0:29:61.67:0,62,2289	0/0:16,0:16:42.14:0,42,1668	0/0:39,0:36:99:0,99,3553	0/0:5,1:5:3.21:0,3,30	0/1:8,1:5:44.91:77,0,45	0/1:0,3:5:0:0,0,0	0/0:19,5:22:2.45:0,2,14	0/0:42,0:41:99:0,111,4121	0/0:19,0:15:42.13:0,42,1450	0/0:50,0:50:84.97:0,85,4591	1/1:1,1:3:0.10:0,0,0	0/1:4,3:6:99:185,0,142	1/1:1,1:3:7.26:118,7,0	1/1:1,4:5:6.02:108,6,0
chr10	76399548	.	CAT	C	73.07	PASS	AB=1.000;AC=14;AF=0.259;AN=54;BaseQRankSum=7.566;DP=770;FS=0.829;HRun=0;HaplotypeScore=139.9349;InbreedingCoeff=0.5148;MQ=49.48;MQ0=30;MQRankSum=-6.248;QD=0.64;ReadPosRankSum=-2.626;VQSLOD=2.0839;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,1:48:93.59:0,94,1442	0/0:11,0:11:20.02:0,20,434	0/0:38,0:8:14.98:0,15,215	0/1:44,0:8:7.60:8,0,58	./.	0/0:34,0:34:72.94:0,73,1241	0/0:58,0:50:99:0,101,1844	0/0:57,0:46:99:0,114,2024	0/0:24,1:25:61.41:0,61,1075	0/0:59,1:57:99:0,100,2513	0/0:11,0:10:27.09:0,27,513	0/0:53,0:52:99:0,141,2513	0/0:29,0:28:69.57:0,70,1320	0/0:27,0:26:59.23:0,59,1088	0/0:28,1:29:54:0,54,1026	0/0:16,0:16:45.15:0,45,828	0/0:37,4:37:53.49:0,53,1534	1/1:6,1:5:7.49:54,7,0	1/1:7,1:4:5.89:53,6,0	0/1:5,0:5:0:0,0,0	1/1:21,11:22:2.66:45,3,0	0/0:43,1:42:99:0,114,2021	0/0:18,0:14:41.94:0,42,687	0/0:50,1:50:87.29:0,87,2118	1/1:3,0:3:0.22:1,0,0	0/1:8,0:6:19.15:19,0,62	1/1:3,0:3:2.94:18,3,0	0/1:5,0:5:11.96:14,0,12
chr10	76399569	.	C	CCA	646.19	PASS	AB=0.701;AC=11;AF=0.204;AN=54;BaseQRankSum=7.492;DP=846;FS=5.054;HRun=0;HaplotypeScore=160.5807;InbreedingCoeff=0.4034;MQ=53.66;MQ0=40;MQRankSum=-5.729;QD=5.48;ReadPosRankSum=-2.893;VQSLOD=2.7679;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:37:4.58:0,5,547	0/0:12,0:12:36.10:0,36,436	0/0:61,0:8:5.53:0,6,129	0/0:66,0:19:19.93:0,20,192	./.	0/0:30,0:29:53.21:0,53,667	0/0:55,0:46:90.85:0,91,1106	0/0:55,0:42:83.96:0,84,947	0/0:25,0:25:60.12:0,60,738	0/0:54,0:50:98.35:0,98,1369	0/0:14,0:11:30.09:0,30,381	0/0:53,0:51:99:0,117,1482	0/0:28,0:27:60.15:0,60,757	0/0:28,0:27:66.09:0,66,783	0/0:26,0:25:62.85:0,63,768	0/0:22,0:21:51.16:0,51,657	0/0:37,0:34:79.38:0,79,978	1/1:6,2:8:1.34:62,1,0	0/1:10,2:8:48.36:88,0,48	0/0:1,8:9:0.44:0,0,0	1/1:41,20:44:2.64:34,3,0	0/0:45,0:43:99:0,111,1334	0/0:12,0:11:24.01:0,24,276	0/0:47,0:47:82.81:0,83,1105	1/1:3,5:8:2.06:7,2,0	0/1:8,6:10:46.31:219,0,46	1/1:5,1:6:1.77:131,2,0	0/1:1,5:6:7.44:235,0,7
chr10	76399604	.	C	CCA	1858.28	PASS	AB=0.766;AC=11;AF=0.196;AN=56;BaseQRankSum=4.315;DP=938;FS=13.268;HRun=0;HaplotypeScore=183.6205;InbreedingCoeff=0.3727;MQ=47.34;MQ0=60;MQRankSum=-3.304;QD=8.85;ReadPosRankSum=2.184;VQSLOD=2.3580;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:32:11.80:0,12,423	0/0:16,0:14:32.95:0,33,367	0/0:53,0:5:0.30:0,0,32	0/0:65,0:14:4.05:0,4,78	1/1:6,7:12:8.94:149,9,0	0/0:26,0:26:51.03:0,51,603	0/0:56,0:51:99:0,114,1385	0/0:57,0:49:99:0,101,1211	0/0:29,0:29:72.21:0,72,884	0/0:50,0:44:76.43:0,76,1219	0/0:18,0:15:21.06:0,21,263	0/0:40,0:36:81.24:0,81,998	0/0:26,0:25:63.17:0,63,763	0/0:30,0:29:48.03:0,48,597	0/0:37,0:33:72.12:0,72,870	0/0:24,0:19:26.82:0,27,336	0/0:33,0:32:70.93:0,71,823	0/1:10,8:16:99:201,0,128	0/1:18,5:12:8.87:230,0,9	0/0:13,6:13:0.21:0,0,0	0/1:59,35:72:38.06:445,0,38	0/0:44,0:41:93.20:0,93,1123	0/0:17,0:15:34.88:0,35,399	0/0:43,0:43:81.21:0,81,990	0/1:9,3:12:62.67:75,0,63	0/1:22,8:21:93.85:357,0,94	1/1:4,6:10:17.09:253,17,0	1/1:3,5:8:21.07:307,21,0
chr10	76399640	.	TAC	T	1949.39	PASS	AB=0.978;AC=23;AF=0.411;AN=56;BaseQRankSum=3.893;DP=876;FS=37.035;HRun=0;HaplotypeScore=184.0153;InbreedingCoeff=-0.2736;MQ=45.60;MQ0=50;MQRankSum=2.178;QD=3.53;ReadPosRankSum=-0.327;VQSLOD=1.4298;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,1:30:71.80:107,0,72	0/1:13,0:11:15.21:60,0,15	0/0:54,0:6:7.84:0,8,97	0/0:69,0:5:6.02:0,6,85	0/1:15,2:15:18.14:18,0,44	0/1:29,1:29:26.73:136,0,27	1/1:42,0:39:31.90:375,32,0	0/1:59,2:46:99:226,0,353	0/0:36,0:34:61.38:0,61,1175	0/1:40,0:31:69.81:270,0,70	0/1:14,0:11:11.22:58,0,11	0/0:37,0:34:87.24:0,87,1350	0/0:29,0:28:74.86:0,75,1132	0/1:26,0:26:78.92:112,0,79	0/1:38,0:33:47.72:139,0,48	0/1:24,0:22:51.64:99,0,52	0/1:33,1:34:79.65:180,0,80	0/1:17,1:16:25.06:83,0,25	0/1:17,0:11:28.22:28,0,43	1/1:10,0:9:4.20:16,4,0	0/1:83,4:74:38.14:38,0,67	0/0:32,0:31:69.23:0,69,1124	0/0:23,0:19:39.13:0,39,637	0/0:41,0:41:81.02:0,81,1290	0/1:15,0:12:3.85:11,0,4	0/1:18,1:11:34.26:63,0,34	1/1:6,0:6:6.92:58,7,0	0/1:9,0:7:16.53:40,0,17
chr10	76399674	.	CCA	C	1592.44	PASS	AB=0.764;AC=15;AF=0.268;AN=56;BaseQRankSum=6.055;DP=852;FS=0.000;HRun=0;HaplotypeScore=180.8948;InbreedingCoeff=0.3882;MQ=47.73;MQ0=41;MQRankSum=-4.863;QD=7.30;ReadPosRankSum=1.967;VQSLOD=2.9842;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,11:24:25.48:296,0,25	0/0:16,0:14:30.10:0,30,495	0/0:67,2:9:8.29:0,8,107	0/0:76,0:8:10.08:0,10,86	1/1:2,12:13:9.03:113,9,0	0/0:27,0:26:55.07:0,55,893	0/0:33,1:31:36.62:0,37,799	0/0:52,0:37:70.11:0,70,1103	0/0:35,0:35:84.28:0,84,1357	0/0:34,0:30:61.10:0,61,1134	0/0:13,0:13:24.08:0,24,395	0/0:47,0:46:99:0,123,1973	0/0:25,3:28:31.70:0,32,1036	0/0:35,0:35:66.22:0,66,1070	0/0:41,0:38:63.68:0,64,996	0/0:29,0:29:35.60:0,36,1147	0/0:35,1:36:30.55:0,31,1347	0/1:11,5:12:0.13:135,0,0	0/1:11,3:8:39.46:98,0,39	1/1:3,7:9:12.04:150,12,0	0/1:40,27:61:19.56:273,0,20	0/0:28,0:27:57.19:0,57,922	0/1:13,1:14:4.39:4,0,462	0/0:32,2:34:28.68:0,29,997	1/1:6,10:14:8.94:113,9,0	0/1:9,15:17:99:330,0,142	0/1:5,2:5:23.56:66,0,24	1/1:2,5:6:15.05:188,15,0
chr10	76399697	.	CAT	C	277.39	PASS	AB=0.878;AC=4;AF=0.071;AN=56;BaseQRankSum=5.526;DP=899;FS=5.134;HRun=0;HaplotypeScore=209.7037;InbreedingCoeff=-0.0885;MQ=46.49;MQ0=33;MQRankSum=-5.169;QD=2.48;ReadPosRankSum=-2.700;VQSLOD=2.2018;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,2:31:34:34,0,527	0/0:15,0:13:20.84:0,21,466	0/0:49,0:6:5.50:0,6,67	0/0:67,0:10:23.02:0,23,257	0/0:23,0:22:24.02:0,24,297	0/0:28,0:27:63.09:0,63,1100	0/0:32,0:32:78.10:0,78,1430	0/0:42,0:28:74.52:0,75,1015	0/0:37,0:37:81.41:0,81,1618	0/0:36,0:33:86.94:0,87,1350	0/0:14,0:14:29.30:0,29,527	0/0:45,0:45:99:0,131,2257	0/0:33,0:33:83.79:0,84,1345	0/0:32,0:32:75.11:0,75,1353	0/0:36,1:37:50.12:0,50,1583	0/0:33,0:33:35.71:0,36,1187	0/0:38,0:38:69.08:0,69,1512	0/0:18,0:14:29.94:0,30,338	0/1:18,1:9:53.75:54,0,252	0/0:11,2:12:15:0,15,160	0/0:70,9:67:50.72:0,51,663	0/0:23,0:22:57.16:0,57,1028	0/0:16,0:15:42.09:0,42,769	0/0:36,1:37:95.22:0,95,1728	0/0:24,7:26:19.89:0,20,266	0/1:40,8:40:99:217,0,1280	0/1:9,4:12:81.92:82,0,274	0/0:8,1:9:4.24:0,4,286
chr10	76399712	.	C	CAT	6121.42	PASS	AB=0.930;AC=22;AF=0.393;AN=56;BaseQRankSum=6.534;DP=958;FS=22.304;HRun=0;HaplotypeScore=206.6030;InbreedingCoeff=-0.4030;MQ=45.71;MQ0=40;MQRankSum=2.208;QD=9.48;ReadPosRankSum=5.016;VQSLOD=2.7084;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:29:99:241,0,155	0/1:14,0:13:26.01:146,0,26	0/0:47,0:5:8.76:0,9,90	0/0:62,0:8:17.98:0,18,200	0/1:18,10:26:22.38:22,0,243	0/1:27,0:26:30.67:358,0,31	0/1:45,0:44:88.51:559,0,89	0/1:40,0:28:99:122,0,258	0/0:36,0:36:86.81:0,87,1168	0/1:45,0:40:99:322,0,295	0/1:16,0:15:59.78:161,0,60	0/0:43,0:43:99:0,123,1741	0/0:30,0:30:78.07:0,78,1002	1/1:33,0:33:0.57:451,1,0	0/1:40,0:41:87.86:638,0,88	1/1:34,0:34:11.97:535,12,0	0/1:33,0:34:85.26:527,0,85	0/1:19,0:16:51.79:52,0,230	0/1:16,2:11:15.80:278,0,16	0/1:15,2:14:70.90:89,0,71	0/1:85,8:74:99:236,0,189	0/0:27,0:26:69.16:0,69,903	0/0:23,0:21:63.20:0,63,884	0/0:44,0:43:99:0,117,1522	0/1:30,8:30:99:114,0,223	0/1:40,16:48:99:1041,0,397	0/1:11,2:12:99:155,0,224	0/1:4,1:5:47.90:75,0,48
chr10	76399714	.	T	TAC	11172.19	PASS	AB=0.795;AC=27;AF=0.482;AN=56;BaseQRankSum=-3.828;DP=981;FS=8.113;HRun=0;HaplotypeScore=196.6985;InbreedingCoeff=0.0730;MQ=44.54;MQ0=46;MQRankSum=-0.048;QD=16.67;ReadPosRankSum=1.265;VQSLOD=4.2686;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,13:29:63.24:462,0,63	1/1:11,6:16:21.06:328,21,0	0/0:47,0:4:5.64:0,6,52	0/0:61,0:7:15.04:0,15,182	0/1:27,2:27:1.41:1,0,219	1/1:14,15:28:19.01:810,19,0	1/1:26,23:48:7.06:1183,7,0	0/1:29,14:31:52.17:422,0,52	0/0:34,0:34:77.75:0,78,978	0/1:31,18:42:99:896,0,155	0/1:7,8:14:14.52:330,0,15	0/0:42,0:42:99:0,120,1541	0/0:30,0:30:59.83:0,60,789	1/1:11,20:31:66.19:1055,66,0	1/1:19,26:45:20.25:1341,20,0	1/1:13,20:33:46.78:1067,47,0	1/1:11,23:34:46.25:1058,46,0	0/1:18,2:17:99:122,0,204	0/1:15,4:11:14.46:295,0,14	0/1:12,7:14:65.16:79,0,65	0/1:87,11:79:99:360,0,150	0/0:26,0:25:59:0,59,738	0/0:24,0:22:60.19:0,60,747	0/0:45,1:44:99:0,102,1258	0/1:28,9:28:89.05:89,0,208	0/1:42,12:46:99:985,0,345	0/1:10,4:13:99:212,0,184	0/1:3,1:4:29.54:77,0,30
chr10	76399751	.	C	CACAT	243.01	PASS	AB=0.941;AC=4;AF=0.071;AN=56;BaseQRankSum=7.503;DP=1055;FS=0.757;HRun=0;HaplotypeScore=285.6121;InbreedingCoeff=-0.0744;MQ=45.33;MQ0=41;MQRankSum=-5.991;QD=1.81;ReadPosRankSum=-5.099;VQSLOD=1.4485;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,9:28:99:303,0,216	0/0:11,0:11:9.44:0,9,250	0/0:51,0:10:29.97:0,30,403	0/1:57,0:5:4.65:5,0,50	0/0:31,0:26:21.68:0,22,489	0/0:25,0:25:59.06:0,59,920	0/0:49,0:46:97.15:0,97,1612	0/0:54,0:44:99:0,114,2013	0/0:31,0:31:84.25:0,84,1479	0/0:51,0:42:99:0,100,1613	0/0:14,0:10:18.04:0,18,303	0/0:33,0:33:90.20:0,90,1487	0/0:25,0:24:69.15:0,69,1216	0/1:24,0:24:19.84:20,0,612	0/0:41,0:39:31.67:0,32,1238	0/0:29,0:29:27.89:0,28,811	0/1:24,0:23:18.12:18,0,876	0/0:24,0:22:45.98:0,46,865	0/0:46,0:29:72.06:0,72,1072	0/0:22,0:19:27.03:0,27,409	0/0:144,0:123:99:0,108,1931	0/0:22,0:21:54.17:0,54,988	0/0:24,0:23:63.14:0,63,1024	0/0:59,0:58:99:0,168,2918	0/0:41,0:37:67.84:0,68,993	0/0:66,0:61:99:0,168,2691	0/0:19,0:17:45.07:0,45,721	0/0:5,0:5:15.05:0,15,238
chr10	76399784	.	T	TACAC	12409.21	PASS	AB=0.799;AC=29;AF=0.518;AN=56;BaseQRankSum=-1.367;DP=980;FS=77.261;HRun=0;HaplotypeScore=237.1096;InbreedingCoeff=0.1355;MQ=45.56;MQ0=51;MQRankSum=-1.790;QD=17.98;ReadPosRankSum=-2.971;VQSLOD=1.5527;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:23:21.92:195,22,0	1/1:11,0:10:3.05:11,3,0	0/0:35,0:5:3.01:0,3,37	0/0:54,0:5:2.92:0,3,8	0/1:12,9:20:27.19:462,0,27	1/1:24,0:24:35.56:427,36,0	0/1:42,0:39:99:189,0,106	0/1:58,0:39:99:516,0,130	0/0:28,0:29:59.99:0,60,992	0/1:38,0:36:17.14:717,0,17	1/1:15,0:12:8.21:55,8,0	0/0:26,0:25:60.18:0,60,959	0/0:23,0:21:42.14:0,42,714	1/1:7,4:31:19.42:186,19,0	1/1:41,0:43:39.12:464,39,0	1/1:17,0:18:25.17:244,25,0	0/1:21,0:22:44.71:248,0,45	0/1:15,14:29:43.46:1049,0,43	0/1:27,3:23:99:282,0,142	1/1:13,7:16:17.72:399,18,0	0/1:83,48:123:38.54:2889,0,39	0/0:22,0:20:42.14:0,42,725	0/0:30,0:29:63.21:0,63,1074	0/0:68,0:69:99:0,175,2907	0/1:16,11:27:15.70:747,0,16	0/1:29,26:50:43.97:2223,0,44	0/1:8,10:18:29.70:434,0,30	1/1:0,9:11:27.09:673,27,0
chr10	76400931	.	TC	T	1547.85	PASS	AB=0.759;AC=8;AF=0.143;AN=56;BaseQRankSum=10.876;DP=580;FS=24.130;HRun=1;HaplotypeScore=133.1523;InbreedingCoeff=-0.1668;MQ=70.16;MQ0=1;MQRankSum=-10.325;QD=9.73;ReadPosRankSum=3.695;VQSLOD=0.0768;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,2031	0/0:12,0:12:33.11:0,33,490	0/0:20,0:18:48.15:0,48,717	0/0:12,1:12:30.02:0,30,407	0/1:15,12:27:99:386,0,509	0/0:19,0:19:54.18:0,54,817	0/0:29,0:29:75.16:0,75,1125	0/0:31,0:31:44.51:0,45,1140	0/0:21,0:21:63.21:0,63,1004	0/0:25,0:25:33.10:0,33,1027	0/0:24,0:24:66.21:0,66,953	0/0:23,0:23:69.24:0,69,1098	0/0:12,0:12:30.10:0,30,478	0/0:13,0:13:38.14:0,38,507	0/0:18,0:18:45.13:0,45,649	0/0:18,0:18:48.16:0,48,723	0/0:31,0:31:84.24:0,84,1228	0/1:8,3:11:50.57:51,0,291	0/1:11,3:12:85.68:86,0,247	0/1:20,16:36:99:515,0,698	0/0:8,0:8:24.08:0,24,351	0/0:16,0:16:48.15:0,48,739	0/0:17,0:17:51.17:0,51,809	0/0:27,0:27:78.27:0,78,1240	0/1:14,9:23:99:280,0,544	0/1:9,3:12:80.43:80,0,336	0/1:10,10:20:99:257,0,360	0/1:14,2:16:29.53:30,0,586
chr10	76400937	.	G	GCTTT	12533.51	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=0.283;DP=583;FS=7.076;HRun=0;HaplotypeScore=137.0279;InbreedingCoeff=0.9742;MQ=65.42;MQ0=1;MQRankSum=-6.681;QD=31.10;ReadPosRankSum=-1.054;VQSLOD=3.8772;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,111,1697	1/1:2,14:17:27.09:664,27,0	0/0:16,0:14:15:0,15,215	0/0:13,0:12:7.81:0,8,130	1/1:28,0:28:63.87:504,64,0	1/1:7,9:18:24.08:552,24,0	1/1:9,17:26:42.14:1033,42,0	1/1:13,21:36:69.21:1461,69,0	0/0:19,0:19:48.16:0,48,787	1/1:8,18:27:54.05:1097,54,0	1/1:6,17:26:54.35:1221,54,0	0/0:23,0:23:48.16:0,48,780	0/0:12,0:12:36.04:0,36,538	1/1:2,10:13:27.09:663,27,0	1/1:5,12:18:27.09:664,27,0	1/1:2,16:18:42.14:1015,42,0	1/1:10,19:30:45.15:1103,45,0	1/1:11,0:11:17.97:174,18,0	1/1:16,0:13:32.88:306,33,0	1/1:36,0:36:95.15:790,95,0	1/1:8,0:8:8.97:78,9,0	0/0:15,0:15:39.13:0,39,643	0/0:16,0:16:39.12:0,39,612	0/0:24,0:24:57.15:0,57,905	1/1:23,0:23:62.25:452,62,0	1/1:12,0:12:26.86:212,27,0	1/1:22,0:22:32.62:239,33,0	1/1:18,0:18:35.78:304,36,0
chr10	76400954	.	CT	C	1160.64	PASS	AB=0.788;AC=9;AF=0.161;AN=56;BaseQRankSum=5.452;DP=586;FS=13.635;HRun=4;HaplotypeScore=140.9063;InbreedingCoeff=-0.1883;MQ=57.46;MQ0=0;MQRankSum=-9.371;QD=5.63;ReadPosRankSum=1.299;VQSLOD=-0.2666;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,1736	0/0:15,0:15:37.69:0,38,262	0/0:14,1:13:33.03:0,33,414	0/0:15,0:14:20.12:0,20,338	0/1:18,9:27:99:171,0,430	0/0:19,0:19:26.67:0,27,389	0/0:22,0:22:53.15:0,53,396	0/1:35,0:35:3.54:4,0,815	0/0:22,0:22:66.21:0,66,900	0/0:26,0:26:29.82:0,30,592	0/0:23,0:23:62.02:0,62,490	0/0:17,0:17:48.16:0,48,665	0/0:14,0:14:42.14:0,42,585	0/0:16,0:16:38.50:0,39,307	0/0:15,0:14:32.48:0,32,242	0/0:19,0:19:46.08:0,46,318	0/0:27,0:27:59.15:0,59,470	0/1:11,2:13:73.93:74,0,258	0/1:25,4:27:99:101,0,646	0/1:29,12:41:99:265,0,964	0/1:4,2:6:51.87:58,0,52	0/0:18,0:18:51.17:0,51,708	0/0:18,0:18:54.17:0,54,736	0/0:22,0:22:60.16:0,60,817	0/1:17,11:28:99:268,0,601	0/1:8,5:13:99:107,0,296	0/0:13,1:14:7.02:0,7,393	0/1:6,8:14:99:249,0,132
chr10	76401104	.	C	CG	2289.87	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.709;DP=561;FS=1.038;HRun=0;HaplotypeScore=69.2250;InbreedingCoeff=0.9798;MQ=52.25;MQ0=52;MQRankSum=-12.029;QD=25.16;ReadPosRankSum=0.116;VQSLOD=4.5155;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:99:0,114,1575	0/0:13,0:13:39.13:0,39,545	0/0:57,0:6:12.04:0,12,167	0/0:61,0:8:21.06:0,21,268	1/1:2,9:11:18.04:214,18,0	0/0:22,0:22:66.20:0,66,903	0/0:28,0:28:84.26:0,84,1148	0/0:31,0:30:90.27:0,90,1237	0/0:21,0:21:63.19:0,63,863	0/0:24,0:24:72.24:0,72,1007	0/0:16,0:16:48.11:0,48,632	0/0:9,0:9:27.07:0,27,360	0/0:10,0:10:30.10:0,30,420	0/0:12,0:12:36.12:0,36,499	0/0:20,0:20:60.20:0,60,839	0/0:20,0:20:57.19:0,57,796	0/0:32,0:32:87.26:0,87,1187	1/1:0,7:5:12.04:156,12,0	1/1:2,13:12:36.11:459,36,0	1/1:0,14:13:33.08:419,33,0	1/1:0,5:5:12.04:146,12,0	0/0:13,0:13:36.12:0,36,503	0/0:22,0:22:66.22:0,66,923	0/0:18,0:18:48.16:0,48,670	1/1:0,11:11:26.91:307,27,0	1/1:0,11:11:27.09:351,27,0	1/1:0,9:9:21.06:258,21,0	1/1:1,7:7:15.05:192,15,0
chr10	76401319	.	GT	G	12089.61	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=11.534;DP=668;FS=1.618;HRun=7;HaplotypeScore=81.4222;InbreedingCoeff=0.9977;MQ=64.60;MQ0=2;MQRankSum=0.264;QD=24.23;ReadPosRankSum=2.311;VQSLOD=5.2731;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,38:43:96.21:979,96,0	1/1:2,12:14:30.06:300,30,0	0/0:23,0:16:33.18:0,33,355	0/0:15,0:13:21.47:0,21,244	1/1:1,23:24:60.14:612,60,0	1/1:2,30:32:66.15:673,66,0	1/1:1,27:28:51.12:520,51,0	1/1:6,24:30:70.49:719,70,0	0/0:23,1:24:32.58:0,33,712	1/1:2,25:26:69.13:695,69,0	1/1:2,25:27:72.16:734,72,0	0/0:18,0:18:51.16:0,51,641	0/0:12,0:12:30.10:0,30,377	1/1:2,17:19:48.11:490,48,0	1/1:1,21:22:60.14:612,60,0	1/1:0,17:17:36.08:367,36,0	1/1:1,21:22:57.13:582,57,0	1/1:6,19:25:18.12:441,18,0	1/1:8,16:22:41.75:448,42,0	1/1:0,20:20:59.92:572,60,0	1/1:0,28:28:72.16:734,72,0	0/0:20,0:20:51.16:0,51,641	0/0:19,0:19:54.17:0,54,679	0/0:38,0:38:99:0,105,1307	1/1:1,14:15:33.07:337,33,0	1/1:1,31:32:93.13:923,93,0	1/1:0,30:30:81.18:825,81,0	1/1:1,19:20:54.02:527,54,0
chr10	76401930	.	T	TTGTG	1937.55	PASS	AB=0.990;AC=32;AF=0.615;AN=52;BaseQRankSum=3.552;DP=702;FS=21.251;HRun=0;HaplotypeScore=171.2444;InbreedingCoeff=0.4067;MQ=64.61;MQ0=11;MQRankSum=-1.153;QD=4.05;ReadPosRankSum=-0.666;VQSLOD=1.3120;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:45,0:44:15.01:289,15,0	1/1:14,0:14:6:92,6,0	./.	./.	1/1:36,0:36:18.41:101,18,0	1/1:16,0:15:3.48:71,3,0	1/1:28,0:28:5.86:109,6,0	1/1:21,0:20:16.66:158,17,0	0/1:27,0:26:2.91:3,0,213	1/1:24,0:24:22.87:343,23,0	1/1:12,0:17:2.98:22,3,0	0/0:23,0:23:24.05:0,24,344	0/0:20,0:20:14.76:0,15,189	1/1:11,0:15:5.77:104,6,0	1/1:22,0:22:6.49:107,6,0	1/1:13,1:15:12.04:198,12,0	1/1:28,0:27:15.05:284,15,0	0/1:20,0:20:9.23:9,0,10	0/0:29,0:26:3.89:0,4,48	0/0:27,0:27:3.90:0,4,85	0/1:65,0:62:0.60:1,0,1	0/0:20,0:20:15.28:0,15,232	0/0:21,0:21:3.44:0,3,154	0/0:23,0:25:23.66:0,24,452	0/1:15,0:16:16.09:16,0,16	0/1:28,0:28:22.83:23,0,38	0/1:30,0:29:50.34:50,0,88	1/1:10,0:10:11.93:128,12,0
chr10	76401940	.	G	GTA	3419.66	PASS	AB=0.677;AC=13;AF=0.232;AN=56;BaseQRankSum=-3.479;DP=715;FS=9.711;HRun=0;HaplotypeScore=118.7627;InbreedingCoeff=0.3641;MQ=56.94;MQ0=13;MQRankSum=3.257;QD=12.13;ReadPosRankSum=5.116;VQSLOD=2.9852;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:15.34:0,15,383	0/0:11,0:11:20.94:0,21,168	0/0:27,0:15:42:0,42,399	0/0:29,0:14:42.05:0,42,422	1/1:4,31:36:4.88:663,5,0	0/0:13,0:12:16.17:0,16,139	0/0:33,0:33:47.72:0,48,382	0/0:20,0:19:47.47:0,47,343	0/0:24,0:23:59.90:0,60,599	0/0:22,0:22:53.69:0,54,428	0/0:18,0:18:18.76:0,19,162	0/0:23,0:23:60:0,60,649	0/0:23,0:23:50.87:0,51,506	0/1:16,0:16:5.67:6,0,57	0/0:23,0:23:19.32:0,19,263	0/0:20,0:19:21.21:0,21,208	0/0:29,0:28:46.91:0,47,331	0/1:3,17:21:21.32:426,0,21	1/1:7,18:22:24.06:422,24,0	0/1:2,21:23:2.73:159,0,3	0/1:15,49:68:49.98:110,0,50	0/0:22,0:22:56.98:0,57,569	0/0:23,0:23:53.27:0,53,518	0/0:27,0:26:43.68:0,44,674	0/1:4,14:19:4.23:408,0,4	1/1:3,21:24:49.34:487,49,0	0/1:7,26:33:55.46:591,0,55	0/1:13,0:13:12.94:147,0,13
chr10	76403530	.	CAG	C	344.14	PASS	AB=0.979;AC=10;AF=0.179;AN=56;BaseQRankSum=-4.204;DP=738;FS=4.569;HRun=0;HaplotypeScore=143.1723;InbreedingCoeff=0.0141;MQ=57.88;MQ0=14;MQRankSum=1.390;QD=1.89;ReadPosRankSum=-7.654;VQSLOD=-0.5268;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:86.93:0,87,1295	0/0:10,0:10:6:0,6,191	0/0:49,0:18:14.21:0,14,435	0/0:49,0:14:28.60:0,29,390	0/0:28,0:28:65.91:0,66,1090	0/1:22,1:23:80.77:81,0,308	0/1:20,0:16:19.57:20,0,221	1/1:13,1:7:21.01:199,21,0	0/0:45,0:45:99:0,126,2172	0/1:19,1:20:19.80:20,0,314	0/1:15,0:14:26.85:27,0,238	0/0:51,0:51:99:0,135,2289	0/0:39,0:39:99:0,117,1977	0/1:19,1:20:78.71:79,0,310	0/1:29,1:30:28.66:29,0,537	0/1:26,0:26:21.84:22,0,480	0/1:14,0:14:18.72:19,0,174	0/0:11,0:11:30.03:0,30,480	0/0:14,0:14:39.07:0,39,596	0/0:17,0:17:36.08:0,36,691	0/0:41,0:40:99:0,102,1712	0/0:32,0:32:93.20:0,93,1475	0/0:33,0:32:93.19:0,93,1564	0/0:42,0:42:83.14:0,83,1587	0/0:12,0:12:36.11:0,36,624	0/0:27,0:24:25.93:0,26,1018	0/0:14,0:14:33.07:0,33,508	0/0:5,0:5:14.77:0,15,151
chr10	76403571	.	C	CAG	11636.78	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-15.853;DP=979;FS=10.325;HRun=0;HaplotypeScore=152.9725;InbreedingCoeff=0.9990;MQ=56.52;MQ0=5;MQRankSum=3.803;QD=41.86;ReadPosRankSum=4.734;VQSLOD=5.2487;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,105,1558	0/0:14,0:14:42.14:0,42,641	0/0:39,0:20:47.90:0,48,578	0/0:33,0:23:57.54:0,58,765	1/1:0,41:41:87.10:1631,87,0	0/0:35,0:34:99:0,99,1430	0/0:32,0:31:80.91:0,81,1126	0/0:36,0:33:96.17:0,96,1260	0/0:42,0:42:99:0,117,1728	0/0:39,0:39:99:0,110,1589	0/0:20,0:20:57.19:0,57,865	0/0:52,0:52:99:0,144,2080	0/0:45,0:45:99:0,132,1919	0/0:38,0:38:99:0,108,1550	0/0:51,0:51:99:0,150,2046	0/0:50,0:50:99:0,147,2181	0/0:24,0:24:62.99:0,63,895	1/1:0,19:19:45.15:866,45,0	1/1:0,10:14:20.53:554,21,0	1/1:1,30:33:78.27:1502,78,0	1/1:6,59:62:99:2229,117,0	0/0:40,0:40:99:0,117,1718	0/0:26,0:26:75.25:0,75,1141	0/0:40,0:40:90.21:0,90,1248	1/1:3,27:31:72.23:1346,72,0	1/1:12,29:39:25.57:1901,26,0	1/1:0,20:21:48.16:914,48,0	1/1:0,13:13:36.12:694,36,0
chr10	76403698	.	C	CATACACACATACTCAT	8021.57	PASS	AB=0.810;AC=17;AF=0.304;AN=56;BaseQRankSum=-0.945;DP=906;FS=9.069;HRun=0;HaplotypeScore=375.6451;InbreedingCoeff=0.8735;MQ=58.32;MQ0=2;MQRankSum=-6.334;QD=28.05;ReadPosRankSum=-0.818;VQSLOD=2.1853;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:40.53:0,41,2023	0/0:13,0:13:39.06:0,39,1000	0/0:39,0:28:53.36:0,53,587	0/0:35,0:29:34.29:0,34,422	1/1:6,30:45:9.01:681,9,0	0/0:22,0:22:51.02:0,51,1582	0/0:18,0:18:36.04:0,36,881	0/0:41,0:38:79.67:0,80,727	0/0:37,0:37:90.12:0,90,2683	0/0:36,0:36:78.22:0,78,2494	0/0:23,0:23:54.08:0,54,1497	0/0:38,0:38:99:0,99,3325	0/0:32,0:32:78.21:0,78,2427	0/0:28,0:28:57.13:0,57,1605	0/0:49,0:49:99:0,117,3738	0/0:39,0:39:99:0,99,2483	0/0:22,0:21:48.03:0,48,1285	1/1:14,0:14:24.08:558,24,0	1/1:23,0:24:53.90:815,54,0	1/1:37,1:46:50.75:875,51,0	1/1:33,0:32:26.96:416,27,0	0/0:43,0:43:96.17:0,96,2546	0/0:30,0:30:78.07:0,78,1799	0/0:40,0:40:85.90:0,86,2416	1/1:18,0:21:20.90:391,21,0	0/1:36,0:47:28.03:2903,0,28	1/1:6,31:40:17.89:1153,18,0	1/1:7,3:14:3.01:230,3,0
chr10	76403798	.	AACACACACAC	A	5504.89	PASS	AB=0.788;AC=16;AF=0.286;AN=56;BaseQRankSum=3.873;DP=799;FS=4.432;HRun=0;HaplotypeScore=259.7492;InbreedingCoeff=0.7780;MQ=51.34;MQ0=14;MQRankSum=-7.197;QD=28.67;ReadPosRankSum=1.279;VQSLOD=4.1957;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:41:44.93:0,45,1628	0/0:5,0:9:3.01:0,3,126	0/0:48,0:22:30.10:0,30,1076	0/0:45,0:26:29.58:0,30,808	1/1:9,14:23:26.83:361,27,0	0/0:16,0:27:25.02:0,25,689	0/0:14,0:21:18.36:0,18,479	0/0:30,0:33:45.15:0,45,1444	0/0:28,0:34:72.25:0,72,3167	0/0:24,0:40:84.29:0,84,2735	0/0:14,0:21:17.24:0,17,413	0/0:26,0:31:66.23:0,66,3053	0/0:19,0:21:39.10:0,39,1674	0/0:12,0:22:6.02:0,6,128	0/0:19,0:35:26.28:0,26,528	0/0:18,0:25:27.09:0,27,944	0/0:15,0:27:15.52:0,16,567	0/1:5,4:10:99:175,0,120	1/1:14,4:18:20.74:571,21,0	1/1:7,23:29:44.59:875,45,0	0/1:17,4:24:4.73:43,0,5	0/0:31,0:34:87.28:0,87,3832	0/0:31,0:32:78.27:0,78,3799	0/0:35,0:38:75.26:0,75,3544	1/1:9,14:24:14.84:387,15,0	1/1:9,21:30:57.19:1675,57,0	1/1:8,15:23:45.08:1234,45,0	1/1:4,4:9:6.02:184,6,0
chr10	76403807	.	AC	A	618.05	PASS	AB=0.916;AC=10;AF=0.179;AN=56;BaseQRankSum=9.938;DP=767;FS=5.582;HRun=1;HaplotypeScore=173.9167;InbreedingCoeff=-0.0559;MQ=49.98;MQ0=22;MQRankSum=-8.413;QD=3.41;ReadPosRankSum=0.574;VQSLOD=0.0070;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:57.14:0,57,675	0/0:10,0:10:12.03:0,12,142	0/0:47,0:22:55.68:0,56,717	0/0:41,0:23:63.19:0,63,807	0/1:20,7:24:99:207,0,118	0/0:26,0:24:35.82:0,36,496	0/0:23,0:23:27.09:0,27,358	0/0:41,0:33:95.52:0,96,1304	0/0:33,0:33:90.56:0,91,1192	0/0:39,0:36:99:0,99,1403	0/0:27,0:23:36.93:0,37,483	0/0:28,0:28:75.35:0,75,1098	0/0:17,0:17:46.68:0,47,660	0/0:16,0:15:9.03:0,9,122	0/0:36,0:36:41:0,41,523	0/0:21,0:19:32.97:0,33,454	0/0:30,0:29:32.90:0,33,452	0/1:7,1:7:1.23:1,0,76	0/1:14,2:15:55.45:55,0,150	1/1:26,0:25:0.14:146,0,0	0/1:22,4:23:66.78:67,0,89	0/0:39,0:38:99:0,107,1570	0/0:34,0:34:91.86:0,92,1379	0/0:38,0:38:95.11:0,95,1406	0/1:19,0:19:25.43:25,0,60	0/1:27,1:27:74.69:75,0,171	0/1:23,2:25:66.65:170,0,67	0/1:6,0:6:4.19:4,0,31
chr10	76404569	.	TCACACACACACACA	T	1599.52	PASS	AB=0.900;AC=21;AF=0.477;AN=44;BaseQRankSum=5.577;DP=436;FS=4.046;HRun=0;HaplotypeScore=181.9975;InbreedingCoeff=0.3935;MQ=39.26;MQ0=35;MQRankSum=-5.843;QD=8.37;ReadPosRankSum=-0.595;VQSLOD=2.6897;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:7,2:8:3.01:112,3,0	./.	./.	./.	0/0:11,2:13:3.37:0,3,17	./.	0/0:21,0:20:0.89:0,1,2	0/0:18,0:18:30.10:0,30,1522	0/1:23,0:24:22.76:209,0,23	./.	0/0:15,0:14:7.84:0,8,253	0/0:26,0:23:36.12:0,36,1549	1/1:11,4:14:3.01:111,3,0	0/1:15,3:17:9.33:33,0,9	1/1:18,5:22:5.89:229,6,0	1/1:9,4:14:5.11:44,5,0	0/1:17,0:15:82.79:83,0,385	1/1:8,0:8:6.02:202,6,0	1/1:15,1:18:3.01:98,3,0	0/0:16,0:11:3.01:0,3,153	0/0:21,0:21:17.22:0,17,897	0/0:11,0:9:15.05:0,15,738	0/0:34,0:32:33.09:0,33,1649	0/0:7,0:10:3.01:0,3,180	1/1:16,0:13:6.02:220,6,0	1/1:7,0:12:5.67:195,6,0	1/1:3,1:4:6.02:213,6,0
chr10	76404930	.	AGCTTTTT	A	2191.75	PASS	AB=0.738;AC=9;AF=0.161;AN=56;BaseQRankSum=9.457;DP=423;FS=25.556;HRun=0;HaplotypeScore=104.0450;InbreedingCoeff=-0.1932;MQ=62.10;MQ0=1;MQRankSum=-7.925;QD=20.68;ReadPosRankSum=0.478;VQSLOD=1.5162;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:60.21:0,60,2423	0/0:6,0:6:18.06:0,18,734	0/0:14,0:9:20.86:0,21,629	0/0:13,0:11:13.67:0,14,878	0/1:13,6:19:99:319,0,1109	0/0:19,0:19:57.20:0,57,2339	0/0:14,0:14:42.14:0,42,1703	0/0:26,0:26:78.27:0,78,3208	0/0:23,0:23:69.24:0,69,2861	0/0:21,0:21:63.22:0,63,2527	0/0:12,0:12:36.12:0,36,1505	0/0:15,0:15:45.15:0,45,1822	0/0:14,0:14:42.14:0,42,1740	0/0:9,0:9:27.09:0,27,1075	0/0:26,0:26:78.27:0,78,3269	0/0:18,0:18:54.19:0,54,2262	0/0:23,0:23:69.24:0,69,2807	0/1:10,2:12:99:132,0,1165	0/1:9,4:13:99:236,0,1075	0/1:3,4:7:99:267,0,342	0/1:6,4:10:99:291,0,626	0/0:12,0:12:36.12:0,36,1505	0/0:10,0:10:30.10:0,30,1244	0/0:20,0:20:57.20:0,57,2386	0/1:9,2:11:99:140,0,799	0/1:8,6:14:99:418,0,961	0/1:11,3:14:99:209,0,1231	0/1:1,4:5:99:320,0,110
chr10	76405164	.	T	TA	2813.79	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=0.977;DP=461;FS=8.425;HRun=8;HaplotypeScore=91.9327;InbreedingCoeff=0.8928;MQ=72.16;MQ0=4;MQRankSum=-4.451;QD=17.48;ReadPosRankSum=-0.600;VQSLOD=2.8408;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:10.82:0,11,430	0/0:5,0:5:12.01:0,12,110	0/0:57,0:28:6.34:0,6,217	0/1:44,0:20:3.03:3,0,166	1/1:3,3:6:15.04:172,15,0	0/0:10,0:10:24.01:0,24,219	0/0:12,0:12:30.02:0,30,274	0/0:28,0:28:55.66:0,56,605	0/0:13,0:13:33.01:0,33,301	0/0:17,0:17:45.01:0,45,409	0/0:16,0:16:41.85:0,42,365	0/0:8,0:8:20.97:0,21,184	0/0:12,0:12:17.94:0,18,211	0/0:7,0:7:21.01:0,21,191	0/0:19,0:19:44.81:0,45,396	0/0:9,0:9:17.84:0,18,151	0/0:22,0:22:60.03:0,60,548	1/1:9,9:18:39.12:449,39,0	1/1:14,10:24:51.11:568,51,0	1/1:2,4:6:18.05:204,18,0	1/1:2,1:3:6.02:69,6,0	0/0:11,0:11:27.01:0,27,247	0/0:11,0:11:21:0,21,192	0/0:9,0:9:24.01:0,24,218	1/1:3,6:9:27.01:294,27,0	1/1:9,11:19:45.08:495,45,0	1/1:12,13:25:54.13:595,54,0	1/1:1,5:6:15.04:173,15,0
chr10	76405176	.	TAA	T	3021.73	PASS	AB=0.625;AC=21;AF=0.375;AN=56;BaseQRankSum=-4.648;DP=470;FS=1.496;HRun=11;HaplotypeScore=102.7314;InbreedingCoeff=0.8896;MQ=71.88;MQ0=6;MQRankSum=0.796;QD=18.89;ReadPosRankSum=2.092;VQSLOD=3.0074;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:33:57.07:0,57,574	1/1:0,4:4:12.03:128,12,0	0/0:54,1:24:13.13:0,13,313	0/0:45,0:20:26.06:0,26,254	0/1:4,1:9:12.95:13,0,51	1/1:2,9:11:21.04:224,21,0	1/1:2,10:12:24.04:255,24,0	1/1:16,20:36:35.80:601,36,0	0/0:13,0:13:39.12:0,39,578	1/1:1,16:17:48.09:501,48,0	1/1:3,14:17:33.06:348,33,0	0/0:9,0:9:24.08:0,24,367	0/0:7,0:8:18.06:0,18,259	1/1:2,5:7:18.04:191,18,0	1/1:3,12:15:30.07:318,30,0	1/1:2,5:7:9.02:96,9,0	1/1:4,19:24:46.64:564,47,0	0/0:7,0:17:34.93:0,35,120	0/0:13,0:23:30.35:0,30,130	0/0:2,0:8:19.84:0,20,69	0/0:1,0:4:9.98:0,10,35	0/0:11,0:11:18.05:0,18,257	0/0:12,0:12:23.78:0,24,343	0/0:9,0:10:26.56:0,27,355	0/0:6,0:11:17.34:0,17,60	0/0:9,0:21:43.29:0,43,177	0/0:7,0:20:41.07:0,41,194	0/0:3,0:6:10.16:0,10,37
chr10	76405267	.	G	GA	3105.38	PASS	AB=0.766;AC=18;AF=0.321;AN=56;BaseQRankSum=4.979;DP=509;FS=15.417;HRun=9;HaplotypeScore=69.9976;InbreedingCoeff=0.7800;MQ=63.01;MQ0=4;MQRankSum=1.539;QD=16.88;ReadPosRankSum=0.813;VQSLOD=2.5022;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:88.94:0,89,751	0/0:10,0:10:26.98:0,27,232	0/0:13,0:9:6.07:0,6,108	0/1:10,0:8:7.13:7,0,28	0/1:12,20:31:38.05:517,0,38	0/0:9,0:9:20.98:0,21,178	0/0:33,1:33:67.12:0,67,706	0/0:25,0:25:56.96:0,57,494	0/0:15,0:15:44.99:0,45,391	0/0:11,0:10:29.99:0,30,260	0/0:13,0:13:32.92:0,33,274	0/0:15,0:16:38.01:0,38,315	0/0:14,0:14:41.99:0,42,364	0/0:16,0:16:38.98:0,39,338	0/0:15,0:15:38.99:0,39,339	0/0:12,0:12:32.98:0,33,283	0/0:26,0:26:62.71:0,63,547	1/1:3,12:15:31.80:362,32,0	1/1:8,10:19:6.86:287,7,0	1/1:2,15:17:33.09:365,33,0	1/1:1,16:16:33.09:365,33,0	0/0:14,0:14:35.99:0,36,312	0/0:21,0:21:56.98:0,57,494	0/0:27,0:27:71.96:0,72,625	1/1:3,14:17:10.05:339,10,0	1/1:10,15:24:42.11:465,42,0	1/1:4,22:25:51.12:563,51,0	1/1:0,5:5:3.01:33,3,0
chr10	76405854	.	A	ACAGGCAGG	2187.44	PASS	AB=0.789;AC=17;AF=0.315;AN=54;BaseQRankSum=-0.093;DP=554;FS=8.405;HRun=0;HaplotypeScore=138.3633;InbreedingCoeff=0.8026;MQ=63.80;MQ0=9;MQRankSum=-2.059;QD=13.18;ReadPosRankSum=-1.845;VQSLOD=1.2574;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:36:20.95:169,21,0	0/0:12,0:12:24.08:0,24,578	0/0:22,0:16:18.05:0,18,340	0/0:28,0:19:13.83:0,14,154	./.	0/0:12,0:12:12.03:0,12,256	0/0:38,0:38:60.18:0,60,1313	0/0:24,0:24:36.07:0,36,711	0/0:21,0:20:45.14:0,45,1015	0/0:15,0:15:18.05:0,18,411	0/0:15,0:15:15.03:0,15,257	0/0:17,0:17:33.10:0,33,649	0/0:16,0:16:21.03:0,21,450	0/0:16,0:16:33.09:0,33,691	0/0:25,0:25:63.11:0,63,1316	0/0:18,0:18:36.08:0,36,758	0/0:34,0:34:66.15:0,66,1499	1/1:19,0:19:21.05:489,21,0	1/1:18,0:14:6.02:161,6,0	1/1:8,5:13:6.49:160,6,0	1/1:38,0:38:32.75:430,33,0	0/0:18,0:18:33.11:0,33,808	0/0:15,0:13:17.90:0,18,338	0/0:29,0:29:57.17:0,57,1269	1/1:8,1:9:3.01:124,3,0	0/1:11,2:15:64.88:217,0,65	1/1:7,6:13:6.02:249,6,0	1/1:0,4:5:9.03:374,9,0
chr10	76406862	.	T	TACTTGAGACCCTATCTC	28144.92	PASS	AB=0.630;AC=17;AF=0.304;AN=56;BaseQRankSum=-1.133;DP=628;FS=2.044;HRun=0;HaplotypeScore=266.7848;InbreedingCoeff=0.9090;MQ=68.86;MQ0=1;MQRankSum=-16.485;QD=163.63;ReadPosRankSum=0.749;VQSLOD=4.3601;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,4488	0/0:6,0:6:18.06:0,18,872	0/0:22,0:22:51.12:0,51,1732	0/0:24,0:22:46.14:0,46,1622	1/1:15,7:23:30.10:2066,30,0	0/0:27,0:27:78.27:0,78,3563	0/0:31,0:31:84.20:0,84,2811	0/0:28,0:28:78.26:0,78,3353	0/0:24,0:24:66.23:0,66,2931	0/0:42,0:42:99:0,114,4761	0/0:21,0:21:63.20:0,63,2698	0/0:12,0:12:36.12:0,36,1745	0/0:24,0:24:66.21:0,66,3046	0/0:12,0:12:36.12:0,36,1663	0/0:36,0:36:99:0,102,4645	0/0:21,0:21:60.18:0,60,2524	0/0:21,0:21:57.17:0,57,2544	1/1:7,3:10:30.10:1797,30,0	1/1:9,3:13:36.09:1999,36,0	1/1:17,9:30:66.23:4342,66,0	1/1:5,1:6:12.04:636,12,0	0/0:20,0:20:54.19:0,54,2277	0/0:27,0:27:78.25:0,78,3483	0/0:21,0:21:63.15:0,63,2537	1/1:12,6:18:48.16:3271,48,0	0/1:12,14:29:20.39:5844,0,20	1/1:18,15:34:87.30:6639,87,0	1/1:6,3:9:21.07:1549,21,0
chr10	76406971	.	T	TGGG	3601.22	PASS	AB=0.581;AC=17;AF=0.304;AN=56;BaseQRankSum=-3.622;DP=545;FS=5.314;HRun=7;HaplotypeScore=79.4422;InbreedingCoeff=0.9048;MQ=92.07;MQ0=0;MQRankSum=-4.671;QD=29.04;ReadPosRankSum=-2.385;VQSLOD=1.3342;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.24:0,81,1088	0/0:13,0:13:39.13:0,39,531	0/0:31,0:31:71.55:0,72,920	0/0:17,0:17:35.20:0,35,473	1/1:0,6:9:17.81:240,18,0	0/0:21,0:21:63.19:0,63,841	0/0:26,0:26:72.23:0,72,981	0/0:27,0:27:66.12:0,66,824	0/0:25,0:25:75.24:0,75,1004	0/0:30,0:30:84.26:0,84,1138	0/0:15,0:15:45.13:0,45,589	0/0:18,0:18:51.16:0,51,695	0/0:14,0:14:39.11:0,39,514	0/0:24,0:24:66.18:0,66,870	0/0:32,0:32:90.27:0,90,1211	0/0:26,0:26:69.19:0,69,925	0/0:20,0:20:54.14:0,54,718	1/1:3,14:19:42.10:792,42,0	1/1:4,5:10:21.02:356,21,0	1/1:3,8:11:21.03:392,21,0	1/1:6,10:16:9.03:187,9,0	0/0:14,0:14:39.12:0,39,532	0/0:17,0:17:45.15:0,45,610	0/0:21,0:21:51.15:0,51,695	1/1:4,11:17:27.07:520,27,0	0/1:5,13:18:8.02:407,0,8	1/1:4,11:16:27.07:521,27,0	1/1:1,5:8:9.03:187,9,0
chr10	76407438	.	CT	C	918.97	PASS	AB=0.753;AC=21;AF=0.375;AN=56;BaseQRankSum=-0.180;DP=428;FS=5.962;HRun=16;HaplotypeScore=63.5297;InbreedingCoeff=0.5370;MQ=59.67;MQ0=11;MQRankSum=4.097;QD=4.31;ReadPosRankSum=3.925;VQSLOD=1.0059;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:24:26.35:76,26,0	1/1:3,1:6:3.39:21,3,0	0/0:9,0:5:0.47:0,0,1	0/0:6,0:4:5.97:0,6,44	0/0:25,1:26:17.96:0,18,223	1/1:2,5:8:13.73:78,14,0	0/1:5,12:18:4.19:126,0,4	0/1:18,7:25:4.60:78,0,5	0/0:16,0:15:28.28:0,28,206	1/1:5,11:18:13.70:175,14,0	1/1:7,7:15:22.48:131,22,0	0/0:8,0:8:5.31:0,5,70	0/0:11,0:11:8.93:0,9,102	1/1:9,4:14:25.13:143,25,0	0/1:7,5:14:13.12:34,0,13	1/1:11,0:13:12.75:63,13,0	1/1:10,14:24:27.31:165,27,0	0/0:13,0:12:11.83:0,12,89	0/1:13,1:14:8.21:8,0,132	0/0:13,1:14:8.74:0,9,162	0/0:6,0:7:7.23:0,7,50	0/0:15,0:16:13.35:0,13,190	0/0:16,0:16:8.99:0,9,119	0/0:23,2:23:16.35:0,16,224	0/0:14,1:16:8.55:0,9,183	0/1:12,2:15:9.76:10,0,153	0/0:17,0:17:14.94:0,15,208	0/0:12,1:11:11.99:0,12,101
chr10	76407652	.	A	ATGAGTGTG	4520.09	PASS	AB=0.996;AC=24;AF=0.429;AN=56;BaseQRankSum=10.550;DP=731;FS=2.358;HRun=0;HaplotypeScore=193.4555;InbreedingCoeff=0.4678;MQ=53.76;MQ0=14;MQRankSum=-5.841;QD=13.06;ReadPosRankSum=-5.654;VQSLOD=2.4248;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:93.08:0,93,1346	1/1:0,6:8:5.89:90,6,0	0/0:40,0:13:18.04:0,18,328	0/0:52,0:20:25.98:0,26,466	0/1:27,0:27:18.93:19,0,683	1/1:3,11:15:6.02:158,6,0	1/1:33,0:32:50.52:500,51,0	1/1:35,0:33:75.98:912,76,0	0/0:30,0:30:90:0,90,1937	1/1:24,0:24:3.59:414,4,0	1/1:14,0:14:11.74:148,12,0	0/0:30,0:30:71.78:0,72,1520	0/0:22,0:22:51.15:0,51,1146	1/1:5,17:23:6.02:168,6,0	1/1:10,18:32:27.05:684,27,0	1/1:26,0:25:32.55:433,33,0	0/1:39,1:40:99:593,0,103	0/0:15,0:14:21.49:0,21,296	0/0:19,0:17:32.32:0,32,541	0/1:14,0:14:55.92:56,0,199	0/0:40,0:39:38.44:0,38,758	0/0:21,0:21:54.14:0,54,1115	0/0:17,0:17:33.09:0,33,697	0/0:46,0:46:99:0,114,2599	0/1:9,0:9:20.80:21,0,192	0/1:23,0:23:99:125,0,647	0/1:23,0:23:99:199,0,346	0/0:7,0:7:4.55:0,5,339
chr10	76407655	.	AGT	A	1576.62	PASS	AB=0.965;AC=10;AF=0.179;AN=56;BaseQRankSum=4.133;DP=728;FS=1.639;HRun=0;HaplotypeScore=135.5423;InbreedingCoeff=-0.0089;MQ=52.43;MQ0=16;MQRankSum=0.994;QD=6.88;ReadPosRankSum=-0.820;VQSLOD=2.8633;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:96.30:0,96,1538	0/1:9,0:9:24.64:25,0,60	0/0:38,0:9:18.06:0,18,284	0/0:53,0:18:26.80:0,27,434	0/0:26,0:26:50.22:0,50,691	0/1:16,0:16:9.30:9,0,23	1/1:31,1:31:6.95:497,7,0	0/1:21,13:32:99:446,0,142	0/0:30,0:30:89.68:0,90,1320	0/1:24,0:24:35.95:363,0,36	0/1:15,0:15:74.89:110,0,75	0/0:30,0:30:74.54:0,75,1031	0/0:21,0:21:53.94:0,54,787	0/0:22,0:22:9.09:0,9,32	0/1:33,0:33:21.48:21,0,316	0/1:23,0:24:80.07:210,0,80	0/1:40,0:41:39.51:40,0,178	0/0:16,0:15:20.94:0,21,304	0/0:17,0:15:36.12:0,36,557	0/0:13,0:13:29.29:0,29,314	0/0:37,0:36:39.12:0,39,574	0/0:21,0:21:59.97:0,60,929	0/0:17,0:17:32.98:0,33,491	0/0:47,0:47:99:0,117,1942	0/0:9,0:9:21.06:0,21,310	0/0:22,0:22:18.19:0,18,813	0/0:24,0:24:38.15:0,38,549	0/0:7,0:7:21.07:0,21,331
chr10	76407657	.	T	TGTGTGA	3940.74	PASS	AB=0.964;AC=20;AF=0.357;AN=56;BaseQRankSum=11.097;DP=730;FS=1.795;HRun=0;HaplotypeScore=171.5742;InbreedingCoeff=0.0646;MQ=52.03;MQ0=16;MQRankSum=-6.687;QD=11.29;ReadPosRankSum=-2.330;VQSLOD=2.2546;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:94.70:0,95,1148	0/1:9,0:9:14.99:37,0,15	0/0:38,0:8:18.06:0,18,319	0/0:55,0:17:17.79:0,18,493	0/1:29,0:29:38.16:38,0,626	0/1:14,0:14:35.79:127,0,36	1/1:33,0:32:30.89:430,31,0	1/1:31,0:29:22.41:504,22,0	0/0:30,0:30:90.27:0,90,1905	1/1:7,14:23:3.88:403,4,0	0/1:14,0:14:70.09:108,0,70	0/0:30,0:30:78.09:0,78,1509	0/0:20,0:20:54.18:0,54,1100	1/1:21,0:21:5.98:125,6,0	0/1:32,2:34:14.70:447,0,15	0/1:24,1:24:1.26:355,0,1	0/1:20,19:41:99:538,0,114	0/0:18,0:17:21.42:0,21,293	0/0:18,0:16:37.75:0,38,632	0/1:14,0:14:99:105,0,208	0/0:40,0:39:37.23:0,37,716	0/0:22,0:22:60.19:0,60,1249	0/0:15,0:15:33.09:0,33,661	0/0:46,0:46:99:0,117,2558	0/1:10,0:10:65.93:66,0,205	0/1:21,0:21:99:258,0,653	0/1:23,0:23:99:381,0,344	0/1:7,0:7:18.54:19,0,309
chr10	76407665	.	A	AGTGTGT	5845.54	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=3.674;DP=754;FS=0.000;HRun=0;HaplotypeScore=162.4671;InbreedingCoeff=0.5170;MQ=49.98;MQ0=22;MQRankSum=-5.323;QD=10.79;ReadPosRankSum=-3.386;VQSLOD=3.1320;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:54:41.09:640,41,0	1/1:11,0:11:9.41:67,9,0	0/0:48,0:6:2.98:0,3,21	0/1:60,0:16:68.43:68,0,84	1/1:14,10:29:11.09:266,11,0	1/1:13,0:13:5.53:108,6,0	1/1:34,0:33:10.01:80,10,0	0/1:37,0:36:12.86:206,0,13	0/0:25,0:29:63.20:0,63,1191	1/1:19,0:19:17.65:303,18,0	0/1:14,0:14:33.84:77,0,34	0/0:25,0:30:45.03:0,45,692	0/0:18,0:21:36.12:0,36,690	1/1:22,0:22:15:184,15,0	1/1:29,0:29:3.71:364,4,0	1/1:25,0:24:16.42:264,16,0	0/1:36,0:36:99:269,0,116	1/1:8,1:18:15.02:288,15,0	1/1:18,0:16:12.01:169,12,0	1/1:7,6:12:14.93:331,15,0	1/1:25,1:39:3.63:40,4,0	0/0:22,0:23:45.14:0,45,851	0/0:15,0:15:21.06:0,21,396	0/0:46,0:46:6.49:0,6,1653	1/1:7,5:12:9.03:235,9,0	1/1:10,10:23:33.09:804,33,0	1/1:8,13:25:30.10:948,30,0	1/1:6,1:9:6.02:136,6,0
chr10	76408281	.	A	AT	4837.85	PASS	AB=0.556;AC=17;AF=0.304;AN=56;BaseQRankSum=-9.435;DP=595;FS=13.042;HRun=8;HaplotypeScore=80.1312;InbreedingCoeff=0.9153;MQ=77.25;MQ0=0;MQRankSum=-3.251;QD=26.44;ReadPosRankSum=2.220;VQSLOD=4.5565;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,108,962	0/0:10,0:10:30:0,30,270	0/0:19,0:19:36.66:0,37,298	0/0:24,0:24:42.93:0,43,415	1/1:7,31:38:84.17:940,84,0	0/0:24,0:24:63:0,63,567	0/0:19,0:19:51.02:0,51,467	0/0:28,0:28:71.99:0,72,646	0/0:26,0:26:68.99:0,69,623	0/0:19,0:19:51:0,51,460	0/0:10,0:10:27.01:0,27,247	0/0:21,0:21:50.95:0,51,453	0/0:19,0:19:45:0,45,408	0/0:21,0:21:60:0,60,539	0/0:22,0:22:57:0,57,516	0/0:21,0:21:54:0,54,488	0/0:34,0:34:96.01:0,96,867	0/1:3,12:15:25.78:339,0,26	1/1:6,11:17:36.05:375,36,0	1/1:2,13:15:39.12:450,39,0	1/1:5,16:21:45.13:519,45,0	0/0:23,0:23:57.03:0,57,521	0/0:16,0:16:47.98:0,48,431	0/0:16,0:16:47.99:0,48,429	1/1:2,18:20:54.16:623,54,0	1/1:3,21:24:42.35:692,42,0	1/1:0,21:21:51.15:588,51,0	1/1:0,12:12:27.07:312,27,0
chr10	76408597	.	CCTTT	C	6307.68	PASS	AB=0.561;AC=17;AF=0.304;AN=56;BaseQRankSum=11.503;DP=701;FS=13.014;HRun=0;HaplotypeScore=146.4093;InbreedingCoeff=0.9059;MQ=66.43;MQ0=5;MQRankSum=1.482;QD=29.75;ReadPosRankSum=2.637;VQSLOD=4.4677;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,105,2476	0/0:10,0:10:30.09:0,30,694	0/0:45,0:26:39.89:0,40,733	0/0:40,0:26:32.36:0,32,870	1/1:5,27:31:66.46:1083,66,0	0/0:19,0:19:57.17:0,57,1345	0/0:25,0:25:72.09:0,72,1539	0/0:35,0:35:84.14:0,84,1531	0/0:26,0:26:72.19:0,72,1579	0/0:25,0:25:71.89:0,72,1636	0/0:19,0:19:48.14:0,48,1058	0/0:22,0:22:57.14:0,57,1180	0/0:15,0:15:39.10:0,39,803	0/0:26,0:26:78.21:0,78,1746	0/0:29,0:29:84.25:0,84,1900	0/0:18,0:18:48.13:0,48,1031	0/0:29,0:29:37.92:0,38,1506	1/1:11,9:20:57.04:849,57,0	1/1:10,23:32:52.68:756,53,0	1/1:2,22:24:60.02:928,60,0	1/1:5,26:31:48.11:813,48,0	0/0:17,0:17:45.12:0,45,955	0/0:21,0:21:63.17:0,63,1418	0/0:27,0:27:75.07:0,75,1783	1/1:1,13:14:21.07:371,21,0	0/1:5,18:23:19.67:730,0,20	1/1:4,23:27:34.13:620,34,0	1/1:0,8:8:9.03:158,9,0
chr10	76408719	.	C	CAA	8594.16	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.516;DP=554;FS=1.557;HRun=0;HaplotypeScore=105.4288;InbreedingCoeff=0.9919;MQ=73.55;MQ0=0;MQRankSum=-5.147;QD=52.09;ReadPosRankSum=3.160;VQSLOD=5.3177;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,157,2533	0/0:10,0:10:30.10:0,30,488	0/0:18,0:17:42.12:0,42,676	0/0:16,0:16:14.31:0,14,626	1/1:1,25:27:72.25:1341,72,0	0/0:16,0:16:45.15:0,45,731	0/0:24,0:24:72.25:0,72,1171	0/0:21,0:21:63.22:0,63,1027	0/0:26,0:26:78.27:0,78,1271	0/0:22,0:22:60.20:0,60,973	0/0:14,0:14:42.13:0,42,645	0/0:18,0:18:54.18:0,54,881	0/0:20,0:20:60.20:0,60,970	0/0:14,0:14:39.13:0,39,636	0/0:15,0:15:45.15:0,45,730	0/0:11,0:11:33.11:0,33,539	0/0:31,0:31:93.28:0,93,1467	1/1:0,20:20:57.15:1056,57,0	1/1:0,11:11:33.11:642,33,0	1/1:1,10:11:30.09:584,30,0	1/1:0,37:37:99:1867,99,0	0/0:15,0:15:45.14:0,45,710	0/0:7,0:7:18.06:0,18,290	0/0:36,0:36:99:0,102,1636	1/1:3,13:16:45.11:813,45,0	1/1:1,20:21:14.25:1116,14,0	1/1:0,13:13:39.13:763,39,0	1/1:2,7:9:21.06:411,21,0
chr10	76409216	.	GAGCCACCACCCCC	G	11036.58	PASS	AB=0.538;AC=17;AF=0.304;AN=56;BaseQRankSum=14.674;DP=610;FS=12.251;HRun=0;HaplotypeScore=226.5843;InbreedingCoeff=0.9070;MQ=86.64;MQ0=0;MQRankSum=-12.919;QD=68.55;ReadPosRankSum=4.088;VQSLOD=3.4440;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,6317	0/0:5,0:5:15.05:0,15,874	0/0:20,0:20:52.03:0,52,2616	0/0:28,0:28:72.14:0,72,3473	1/1:1,18:19:36.08:1326,36,0	0/0:21,0:21:57.20:0,57,3436	0/0:44,0:44:99:0,126,6930	0/0:13,0:13:33.11:0,33,1827	0/0:19,0:19:57.18:0,57,3550	0/0:19,0:19:57.20:0,57,3297	0/0:6,0:6:15.05:0,15,984	0/0:31,0:31:90.29:0,90,5423	0/0:18,0:18:54.19:0,54,3310	0/0:29,0:29:81.28:0,81,5260	0/0:33,0:33:93.28:0,93,5633	0/0:31,0:31:90.31:0,90,5727	0/0:39,0:39:99:0,111,6495	1/1:6,8:14:18.06:713,18,0	1/1:4,9:14:30.09:818,30,0	1/1:8,10:17:27.05:969,27,0	1/1:9,14:23:19.89:716,20,0	0/0:9,0:9:27.08:0,27,1593	0/0:10,0:10:30.10:0,30,1928	0/0:34,0:34:99:0,99,6081	1/1:0,9:9:21.07:832,21,0	0/1:4,24:28:99:2574,0,122	1/1:6,21:27:51.18:2020,51,0	1/1:0,9:9:27.09:1070,27,0
chr10	76409614	.	G	GTCATTA	10934.64	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=3.824;DP=536;FS=20.236;HRun=0;HaplotypeScore=163.6377;InbreedingCoeff=0.4149;MQ=69.58;MQ0=4;MQRankSum=-8.734;QD=26.93;ReadPosRankSum=-4.765;VQSLOD=2.4787;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:99:183,0,181	1/1:2,8:10:18.06:563,18,0	0/0:21,0:20:54.05:0,54,959	0/0:17,0:13:26:0,26,434	0/1:21,0:21:76.26:76,0,97	1/1:1,13:16:12.04:391,12,0	1/1:7,12:19:12.04:308,12,0	1/1:44,0:40:99:1401,100,0	0/0:16,0:16:48.11:0,48,872	1/1:12,19:31:69.18:1990,69,0	1/1:3,17:21:20.94:339,21,0	0/0:5,0:5:15.05:0,15,348	0/0:16,0:16:45.11:0,45,867	1/1:4,19:23:42.14:1356,42,0	1/1:2,26:28:54.19:1870,54,0	1/1:9,26:37:17.15:1233,17,0	1/1:6,18:27:18.06:564,18,0	0/1:21,0:20:57.21:60,0,57	0/1:24,0:24:9.47:405,0,9	0/0:11,0:11:13.97:0,14,71	0/1:14,0:14:16.64:29,0,17	0/0:8,0:8:21.07:0,21,482	0/0:11,0:11:33.09:0,33,662	0/0:11,0:11:30.09:0,30,621	0/0:14,0:14:7.48:0,7,97	0/1:18,0:18:89.45:132,0,89	0/1:22,0:22:17.74:18,0,58	0/1:6,0:6:12.44:16,0,12
chr10	76409620	.	ATCATCG	A	2195.61	PASS	AB=0.974;AC=18;AF=0.321;AN=56;BaseQRankSum=-1.745;DP=529;FS=0.000;HRun=0;HaplotypeScore=183.8252;InbreedingCoeff=0.7604;MQ=67.08;MQ0=4;MQRankSum=3.600;QD=11.15;ReadPosRankSum=-0.438;VQSLOD=2.0206;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:14.82:0,15,464	0/0:9,0:9:15.05:0,15,298	0/0:24,0:20:45.09:0,45,756	0/0:19,0:14:16.72:0,17,246	1/1:20,2:22:31.05:329,31,0	0/0:14,0:14:12.04:0,12,222	0/0:16,0:16:6.02:0,6,125	0/1:41,0:37:99:132,0,407	0/0:16,0:16:39.06:0,39,907	0/0:33,0:33:35.15:0,35,1390	0/0:21,0:21:5.69:0,6,116	0/0:6,0:6:18.05:0,18,505	0/0:16,0:16:36.08:0,36,958	0/0:24,0:24:39.13:0,39,750	0/0:28,0:28:51.17:0,51,1024	0/0:30,0:30:27.09:0,27,536	0/0:22,0:22:15.94:0,16,301	1/1:17,2:18:23.34:212,23,0	1/1:22,4:26:65.70:760,66,0	1/1:12,0:12:20.50:166,20,0	1/1:9,5:14:8.89:89,9,0	0/0:7,0:7:21.02:0,21,390	0/0:12,0:11:33.02:0,33,669	0/0:9,0:9:27.03:0,27,542	1/1:16,1:17:21.78:208,22,0	0/1:17,1:18:25.17:295,0,25	1/1:19,1:20:23.29:167,23,0	1/1:8,0:8:5.91:38,6,0
chr10	76409623	.	ATCG	A	3591.50	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-1.214;DP=508;FS=0.000;HRun=0;HaplotypeScore=157.1696;InbreedingCoeff=0.8173;MQ=64.52;MQ0=5;MQRankSum=2.816;QD=16.40;ReadPosRankSum=-1.998;VQSLOD=2.7529;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:15.50:0,15,251	0/0:8,0:8:14.88:0,15,104	0/0:23,0:18:45.09:0,45,576	0/0:19,0:13:17.57:0,18,173	1/1:3,17:20:32.78:361,33,0	0/0:14,0:14:11.83:0,12,77	0/0:15,0:15:5.98:0,6,49	1/1:39,0:35:25.77:289,26,0	0/0:14,0:14:39.06:0,39,626	0/1:33,0:33:32.80:33,0,448	0/0:19,0:19:5.64:0,6,43	0/0:7,0:7:21.01:0,21,344	0/0:15,0:15:36.08:0,36,642	0/0:24,0:24:36.99:0,37,259	0/0:27,0:27:50.63:0,51,365	0/0:30,0:30:26.77:0,27,187	0/0:23,0:23:0.39:0,0,89	1/1:2,15:17:24.08:382,24,0	1/1:6,18:24:65.96:702,66,0	1/1:1,10:11:20.99:285,21,0	1/1:5,8:13:8.94:104,9,0	0/0:7,0:7:21:0,21,265	0/0:12,0:11:33.02:0,33,470	0/0:9,0:9:27:0,27,373	1/1:1,16:17:30.09:452,30,0	1/1:3,14:17:13.52:525,14,0	1/1:2,18:20:23.91:357,24,0	1/1:1,7:8:6.02:102,6,0
chr10	76409642	.	T	TCA	886.61	PASS	AB=0.975;AC=14;AF=0.250;AN=56;BaseQRankSum=11.898;DP=430;FS=3.909;HRun=0;HaplotypeScore=160.9179;InbreedingCoeff=0.3900;MQ=44.57;MQ0=5;MQRankSum=-6.999;QD=4.14;ReadPosRankSum=6.549;VQSLOD=2.3919;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,5:28:95.56:96,0,101	1/1:8,0:8:14.78:96,15,0	0/0:15,0:8:24.06:0,24,360	0/0:12,0:5:9.01:0,9,96	0/0:16,0:16:42.03:0,42,553	0/1:13,0:13:10.48:46,0,10	1/1:15,0:15:5.33:27,5,0	0/0:27,0:23:2.76:0,3,177	0/0:9,0:9:27.09:0,27,434	0/1:35,0:35:85.20:85,0,331	0/1:20,0:20:19.89:20,0,21	0/0:7,0:7:21.06:0,21,313	0/0:11,0:11:33.08:0,33,486	0/1:25,0:25:1.48:164,0,1	1/1:28,0:28:49.54:294,50,0	1/1:24,0:24:26.48:163,26,0	0/1:18,0:18:44.43:68,0,44	0/0:14,0:13:30.07:0,30,384	0/0:19,0:19:46.86:0,47,612	0/0:8,0:8:24.08:0,24,325	0/0:8,0:8:6.02:0,6,89	0/0:3,0:3:9.03:0,9,147	0/0:7,0:6:18.05:0,18,269	0/0:6,0:6:18.03:0,18,244	0/0:19,0:19:30.10:0,30,414	0/0:15,0:15:38.49:0,38,517	0/0:12,0:12:21.03:0,21,271	0/0:8,0:8:6.02:0,6,84
chr10	76409643	.	T	TCATCATCATC	4771.53	PASS	AB=0.963;AC=22;AF=0.393;AN=56;BaseQRankSum=7.928;DP=433;FS=1.489;HRun=0;HaplotypeScore=199.5054;InbreedingCoeff=0.6269;MQ=44.39;MQ0=5;MQRankSum=-7.798;QD=17.41;ReadPosRankSum=0.534;VQSLOD=4.1125;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,5:29:54.04:715,0,54	1/1:8,0:8:15.05:261,15,0	0/0:14,0:7:21.07:0,21,519	0/1:12,0:5:0.88:1,0,15	0/0:16,0:16:44.96:0,45,848	1/1:13,0:13:4.55:216,5,0	1/1:16,0:16:6.02:124,6,0	1/1:29,0:25:14.25:515,14,0	0/0:9,0:9:27.08:0,27,840	0/1:37,0:37:99:560,0,106	1/1:20,0:20:0.02:124,0,0	0/0:6,0:6:18.06:0,18,560	0/0:11,0:11:33.09:0,33,934	1/1:25,0:25:33.63:628,34,0	1/1:28,0:28:51.17:860,51,0	1/1:24,0:24:27.09:466,27,0	1/1:18,0:18:21.83:297,22,0	0/0:14,0:13:30.03:0,30,691	0/0:19,0:19:46.82:0,47,845	0/0:8,0:8:24.05:0,24,569	0/0:8,0:8:6.02:0,6,177	0/0:3,0:3:9.03:0,9,286	0/0:6,0:5:15.05:0,15,476	0/0:6,0:6:18.02:0,18,446	0/0:19,0:19:33.10:0,33,864	0/1:15,0:15:3.92:4,0,869	0/0:12,0:12:21.07:0,21,634	0/0:8,0:8:6.02:0,6,200
chr10	76410166	.	C	CG	1974.67	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=0.365;DP=407;FS=0.000;HRun=1;HaplotypeScore=78.6714;InbreedingCoeff=0.8940;MQ=53.11;MQ0=17;MQRankSum=0.310;QD=9.68;ReadPosRankSum=1.264;VQSLOD=1.2136;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,25:35:38.30:455,38,0	1/1:5,0:5:14:71,14,0	1/1:12,0:2:2.37:8,2,0	0/1:21,0:8:0.11:0,0,4	0/0:12,0:12:14.87:0,15,118	1/1:17,0:17:40.11:245,40,0	1/1:8,1:7:17.56:108,18,0	1/1:25,0:23:57.90:297,58,0	0/0:13,0:13:26.97:0,27,240	1/1:8,0:8:23.26:155,23,0	1/1:12,0:11:19.20:96,19,0	0/0:14,0:14:18.24:0,18,211	0/0:10,0:10:14.69:0,15,136	1/1:5,0:4:11.47:68,11,0	1/1:18,0:17:46.03:278,46,0	1/1:8,0:7:11.40:66,11,0	1/1:26,0:23:54.43:343,54,0	0/0:15,0:13:29.89:0,30,249	0/0:14,0:12:32.92:0,33,267	0/0:22,0:21:44.85:0,45,306	0/0:11,0:11:21.38:0,21,170	0/0:17,0:17:34.57:0,35,359	0/0:14,0:14:28.86:0,29,212	0/0:14,0:14:32.95:0,33,348	0/0:16,0:15:35.40:0,35,266	0/0:17,0:16:10.86:0,11,238	0/0:12,0:12:29.95:0,30,248	0/0:2,0:1:3:0,3,26
chr10	76410167	.	GAA	G	1376.28	PASS	AB=0.747;AC=34;AF=0.607;AN=56;BaseQRankSum=8.449;DP=410;FS=1.773;HRun=17;HaplotypeScore=77.5245;InbreedingCoeff=0.4988;MQ=54.26;MQ0=17;MQRankSum=-4.017;QD=5.02;ReadPosRankSum=5.193;VQSLOD=-0.6346;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:37:56.88:0,57,523	1/1:3,3:6:11.08:75,11,0	0/0:15,0:3:5.63:0,6,48	0/1:24,0:9:0.84:1,0,37	1/1:7,0:11:5.26:33,5,0	1/1:7,7:16:8.88:132,9,0	1/1:5,3:7:5.83:62,6,0	0/1:12,9:22:48.64:161,0,49	0/1:9,1:14:1.67:2,0,139	1/1:4,3:8:11.56:77,12,0	1/1:3,7:10:17.69:127,18,0	0/0:11,0:15:26.37:0,26,267	0/0:10,0:10:20.97:0,21,219	1/1:3,2:4:5.96:47,6,0	1/1:6,9:16:32.21:220,32,0	1/1:3,3:6:8.03:62,8,0	1/1:15,10:23:32.26:231,32,0	0/1:12,0:13:4.97:5,0,77	1/1:11,0:12:7.44:34,7,0	1/1:11,0:20:19.39:80,19,0	0/0:10,0:12:3.48:0,3,30	0/0:14,0:17:31.71:0,32,297	0/0:13,0:13:6.02:0,6,72	0/0:16,0:16:16.84:0,17,277	0/1:7,1:14:8.37:72,0,8	0/1:8,0:15:5.25:38,0,5	1/1:5,0:12:24.06:93,24,0	1/1:1,0:1:2.68:11,3,0
chr10	76410183	.	AAGG	A	1925.16	PASS	AB=0.977;AC=30;AF=0.536;AN=56;BaseQRankSum=9.879;DP=535;FS=9.636;HRun=0;HaplotypeScore=113.1737;InbreedingCoeff=0.3910;MQ=64.77;MQ0=16;MQRankSum=-6.984;QD=5.78;ReadPosRankSum=4.311;VQSLOD=1.3297;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:86.85:0,87,1268	1/1:4,0:4:9.54:38,10,0	0/0:41,0:11:24.11:0,24,281	0/0:50,0:20:23.64:0,24,278	1/1:15,0:15:20.14:97,20,0	0/1:22,0:22:25.25:25,0,73	1/1:9,0:8:1.89:21,2,0	0/1:38,0:35:26.29:26,0,176	0/0:14,0:14:33.06:0,33,452	0/1:16,0:17:20.01:20,0,73	0/1:20,0:20:7.20:7,0,54	0/0:16,0:16:39.13:0,39,601	0/0:10,0:10:27.09:0,27,416	0/0:6,0:6:3.62:0,4,40	1/1:18,0:17:18.11:103,18,0	0/1:9,0:9:1.01:21,0,1	0/1:20,0:17:8.89:69,0,9	0/1:22,0:21:27.27:72,0,27	1/1:16,1:16:31.36:293,31,0	1/1:23,0:22:47.06:390,47,0	1/1:10,0:10:6.02:23,6,0	0/0:16,0:16:41.76:0,42,592	0/0:10,0:10:27.09:0,27,395	0/1:12,2:14:52.10:52,0,438	1/1:17,0:16:31.46:274,31,0	1/1:28,0:27:27.01:200,27,0	1/1:23,1:24:42.69:357,43,0	1/1:6,0:5:6.17:32,6,0
chr10	76410186	.	G	GA	3698.22	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=2.091;DP=533;FS=9.437;HRun=8;HaplotypeScore=94.4843;InbreedingCoeff=0.7856;MQ=66.42;MQ0=14;MQRankSum=-2.568;QD=11.52;ReadPosRankSum=0.361;VQSLOD=2.0977;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:76.99:0,77,662	1/1:1,3:4:12.03:133,12,0	0/0:43,0:13:18.13:0,18,204	0/0:50,0:20:20.82:0,21,212	1/1:16,0:16:3.84:30,4,0	1/1:8,15:23:24.04:251,24,0	1/1:2,7:8:9.49:97,9,0	1/1:7,32:36:96.18:1024,96,0	0/0:14,0:14:32.94:0,33,290	1/1:3,14:17:39.11:441,39,0	1/1:6,15:21:36.09:392,36,0	0/0:16,0:16:30.72:0,31,298	0/0:10,0:10:17.99:0,18,159	1/1:4,2:6:15.04:171,15,0	1/1:3,15:17:30.05:314,30,0	1/1:0,9:9:18.03:184,18,0	1/1:10,9:17:39.10:432,39,0	1/1:16,1:17:12.18:55,12,0	1/1:18,0:17:8:40,8,0	1/1:24,0:23:16.03:78,16,0	1/1:10,0:10:3.48:27,3,0	0/0:15,0:15:36.01:0,36,328	0/0:10,0:10:24.01:0,24,217	0/0:13,0:13:4.50:0,4,217	1/1:17,0:16:1.02:8,1,0	1/1:25,0:24:4.75:15,5,0	0/1:23,0:23:1.41:1,0,5	1/1:6,0:5:1.04:4,1,0
chr10	76411064	.	C	CTA	539.01	PASS	AB=0.667;AC=13;AF=0.250;AN=52;BaseQRankSum=-3.195;DP=392;FS=3.591;HRun=0;HaplotypeScore=47.5954;InbreedingCoeff=0.7422;MQ=69.78;MQ0=14;MQRankSum=-0.317;QD=24.50;ReadPosRankSum=-5.685;VQSLOD=2.3116;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:99:0,117,1876	0/0:4,0:4:12:0,12,167	0/0:9,0:9:24.05:0,24,341	0/0:17,0:13:39.13:0,39,589	1/1:2,0:2:6.02:99,6,0	0/0:21,0:21:57.19:0,57,929	0/0:25,0:23:60.19:0,60,936	0/0:22,0:22:63.17:0,63,978	0/0:14,0:14:36.12:0,36,570	0/0:18,0:18:51.14:0,51,801	0/0:17,0:17:42.14:0,42,684	0/0:13,0:13:33.10:0,33,511	0/0:11,0:11:27.09:0,27,440	0/0:15,0:15:42.14:0,42,685	0/0:27,0:26:72.25:0,72,1174	0/0:31,0:29:81.27:0,81,1305	0/0:32,0:32:84.24:0,84,1307	./.	1/1:1,5:6:18.04:268,18,0	1/1:0,3:3:3.01:60,3,0	./.	0/0:18,0:18:48.16:0,48,782	0/0:20,0:20:54.18:0,54,880	0/0:10,0:10:27.09:0,27,438	1/1:3,0:2:6:72,6,0	0/1:2,0:4:28.72:29,0,89	1/1:1,0:1:3.01:49,3,0	1/1:0,2:2:6.02:120,6,0
chr10	76412227	.	TTGTGTG	T	9356.03	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=10.134;DP=591;FS=13.084;HRun=0;HaplotypeScore=136.6595;InbreedingCoeff=0.9377;MQ=54.48;MQ0=23;MQRankSum=-9.732;QD=22.88;ReadPosRankSum=1.543;VQSLOD=3.7097;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:21:20.45:119,20,0	1/1:5,0:5:15.05:236,15,0	0/0:40,0:16:3.44:0,3,331	0/0:26,0:12:20.78:0,21,501	1/1:11,12:23:42.14:835,42,0	1/1:15,0:13:15.05:229,15,0	1/1:13,0:11:18.06:280,18,0	1/1:29,0:25:25.02:357,25,0	0/0:20,0:20:45.15:0,45,1389	1/1:23,0:23:36.11:525,36,0	1/1:25,0:26:33.11:510,33,0	0/0:11,0:11:24.08:0,24,723	0/0:15,0:15:27.09:0,27,764	1/1:15,0:15:15.05:236,15,0	1/1:14,0:14:18.06:279,18,0	1/1:18,0:18:27.09:401,27,0	1/1:28,0:28:29.36:442,29,0	1/1:8,5:13:15.05:305,15,0	1/1:16,9:24:27.09:537,27,0	1/1:13,11:24:39.13:778,39,0	1/1:11,5:15:5.98:77,6,0	0/0:23,0:23:60.19:0,60,1713	0/0:18,0:19:35.53:0,36,924	0/0:23,0:25:57.19:0,57,1577	1/1:6,14:20:33.11:661,33,0	1/1:10,18:28:54.12:997,54,0	1/1:10,23:35:60.20:1196,60,0	1/1:3,13:15:18.06:355,18,0
chr10	76412228	.	TGTGTGTG	T	9162.81	PASS	AB=0.889;AC=30;AF=0.536;AN=56;BaseQRankSum=12.410;DP=574;FS=15.085;HRun=0;HaplotypeScore=141.0124;InbreedingCoeff=0.3313;MQ=54.28;MQ0=23;MQRankSum=-9.901;QD=23.26;ReadPosRankSum=3.258;VQSLOD=3.8835;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:18:44.86:334,45,0	1/1:0,4:5:15.05:387,15,0	0/0:39,0:15:31.43:0,31,558	0/0:27,0:12:29.28:0,29,703	0/1:22,0:22:75.29:384,0,75	1/1:1,12:12:15.05:410,15,0	1/1:3,7:10:25.91:557,26,0	1/1:1,23:24:57.09:884,57,0	0/0:20,0:20:54.09:0,54,1781	1/1:2,20:22:54.07:1123,54,0	1/1:3,22:26:15.17:846,15,0	0/0:11,0:11:24.03:0,24,892	0/0:14,0:14:30.01:0,30,968	0/1:1,14:15:4.99:371,0,5	1/1:1,12:14:18.06:471,18,0	1/1:2,16:18:6.97:720,7,0	0/1:4,23:27:9.87:787,0,10	0/1:13,0:12:25.24:154,0,25	0/1:23,0:22:99:199,0,204	0/1:22,0:23:97.78:338,0,98	0/1:16,0:15:3.60:4,0,114	0/0:23,0:23:66.17:0,66,2178	0/0:19,0:19:42.65:0,43,1251	0/0:26,0:25:63.15:0,63,2010	1/1:18,0:19:13.16:231,13,0	0/1:26,0:27:99:376,0,135	0/1:34,0:35:82.66:466,0,83	0/1:15,0:15:2.16:122,0,2
chr10	76412230	.	TGTGTG	T	5322.11	PASS	AB=0.993;AC=24;AF=0.429;AN=56;BaseQRankSum=14.097;DP=538;FS=13.331;HRun=0;HaplotypeScore=129.0698;InbreedingCoeff=-0.0632;MQ=51.76;MQ0=23;MQRankSum=-10.777;QD=14.27;ReadPosRankSum=5.121;VQSLOD=3.4494;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:16:37.77:302,38,0	1/1:4,1:5:15.05:213,15,0	0/0:39,0:14:26.90:0,27,597	0/0:27,0:12:29.73:0,30,632	0/1:22,0:22:99:278,0,118	1/1:14,0:12:15.05:227,15,0	0/1:10,0:8:1.56:254,0,2	0/1:27,0:24:15.07:316,0,15	0/0:17,0:17:51.17:0,51,1526	0/1:22,0:22:8.14:476,0,8	0/1:25,1:26:15.60:422,0,16	0/0:8,0:8:24.08:0,24,768	0/0:11,0:10:30.10:0,30,840	0/1:15,0:15:19.25:197,0,19	1/1:13,1:14:18.06:256,18,0	0/1:18,0:18:7.34:367,0,7	0/1:27,0:27:38.71:397,0,39	0/1:11,0:10:99:110,0,111	0/1:18,0:17:99:146,0,232	0/1:19,1:20:99:271,0,122	0/1:14,0:13:9.19:9,0,112	0/0:22,0:22:63.22:0,63,1901	0/0:17,0:17:44.13:0,44,1180	0/0:24,0:23:63.21:0,63,1767	0/1:18,0:18:0.74:242,0,1	0/1:25,0:25:99:280,0,169	0/1:33,0:33:97.95:430,0,98	0/1:16,0:15:15.54:129,0,16
chr10	76412586	.	A	AG	11787.60	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=8.488;DP=780;FS=4.483;HRun=1;HaplotypeScore=113.7245;InbreedingCoeff=0.9998;MQ=82.67;MQ0=0;MQRankSum=-2.944;QD=41.22;ReadPosRankSum=1.915;VQSLOD=4.5898;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,57:59:99:2472,166,0	0/0:9,0:9:27.06:0,27,333	0/0:22,0:22:59.45:0,59,749	0/0:23,0:23:69.11:0,69,788	1/1:1,36:37:99:1525,102,0	0/0:23,0:23:69.19:0,69,857	0/0:29,0:29:78.22:0,78,984	0/0:34,0:34:99:0,99,1202	0/0:26,0:26:75.24:0,75,974	0/0:40,0:40:99:0,120,1558	0/0:34,0:34:96.31:0,96,1245	0/0:18,0:18:51.17:0,51,661	0/0:15,0:15:45.13:0,45,569	0/0:25,0:25:69.22:0,69,883	0/0:34,0:34:99:0,102,1310	0/0:31,0:31:87.28:0,87,1129	0/0:44,0:44:99:0,126,1635	1/1:0,19:19:57.19:854,57,0	1/1:3,12:15:39.11:563,39,0	1/1:1,26:27:78.26:1168,78,0	1/1:4,37:41:99:1574,105,0	0/0:30,0:30:84.27:0,84,1090	0/0:22,0:22:63.20:0,63,817	0/0:35,0:35:99:0,102,1309	1/1:1,12:13:33.03:466,33,0	1/1:1,28:29:87.25:1279,87,0	1/1:1,27:28:78.26:1168,78,0	1/1:0,18:18:48.16:719,48,0
chr10	76412859	.	CT	C	6951.46	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.719;DP=620;FS=9.283;HRun=1;HaplotypeScore=60.6983;InbreedingCoeff=0.9988;MQ=82.94;MQ0=0;MQRankSum=-7.414;QD=40.18;ReadPosRankSum=0.203;VQSLOD=4.9013;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,2034	0/0:10,0:10:30.10:0,30,479	0/0:24,0:24:69.22:0,69,1044	0/0:20,1:21:53.67:0,54,801	1/1:0,10:10:30.10:415,30,0	0/0:22,0:22:66.21:0,66,1024	0/0:25,0:25:75.24:0,75,1175	0/0:26,0:26:75.24:0,75,1159	0/0:23,0:23:69.22:0,69,1077	0/0:30,0:30:87.30:0,87,1384	0/0:12,0:12:33.10:0,33,505	0/0:29,0:29:87.30:0,87,1391	0/0:27,0:27:81.27:0,81,1265	0/0:19,0:19:57.19:0,57,904	0/0:30,0:30:90.31:0,90,1438	0/0:19,0:19:57.19:0,57,911	0/0:35,0:35:99:0,105,1651	1/1:0,26:26:78.26:1089,78,0	1/1:0,23:23:66.21:899,66,0	1/1:0,21:21:57.19:795,57,0	1/1:0,30:30:87.29:1215,87,0	0/0:19,0:19:57.19:0,57,911	0/0:8,0:8:21.07:0,21,336	0/0:24,0:24:72.25:0,72,1151	1/1:0,9:9:24.08:334,24,0	1/1:0,21:21:63.21:878,63,0	1/1:0,23:23:66.22:922,66,0	1/1:1,9:10:30.09:405,30,0
chr10	76413013	.	G	GA	1874.72	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-10.177;DP=628;FS=1.926;HRun=4;HaplotypeScore=59.0714;InbreedingCoeff=0.9896;MQ=84.59;MQ0=0;MQRankSum=-2.422;QD=34.72;ReadPosRankSum=0.641;VQSLOD=4.1990;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,53:54:99:1970,144,0	0/0:9,0:9:18.03:0,18,195	0/0:20,0:20:48.11:0,48,529	0/0:25,0:25:57.13:0,57,617	0/0:19,0:19:51.14:0,51,578	0/0:11,0:11:30.09:0,30,340	0/0:15,0:15:39.11:0,39,442	0/0:40,0:40:99:0,105,1164	0/0:18,0:18:45.10:0,45,490	0/0:22,0:22:57.16:0,57,646	0/0:14,0:14:36.10:0,36,408	0/0:24,0:24:69.20:0,69,783	0/0:15,0:15:45.11:0,45,500	0/0:14,0:14:39.10:0,39,433	0/0:23,0:23:69.20:0,69,783	0/0:10,0:10:27.08:0,27,306	0/0:47,0:47:99:0,138,1543	0/0:21,0:21:57.16:0,57,647	0/0:32,0:32:81.22:0,81,911	0/0:17,0:17:48.12:0,48,535	0/0:38,0:38:99:0,105,1191	0/0:15,0:15:45.13:0,45,510	0/0:13,0:13:39.11:0,39,442	0/0:32,0:32:96.27:0,96,1089	0/0:16,0:16:45.10:0,45,498	0/0:27,0:27:75.21:0,75,851	0/0:27,0:27:78.22:0,78,884	0/0:10,0:10:30.09:0,30,339
chr10	76413808	.	AC	A	7887.97	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=11.217;DP=651;FS=2.160;HRun=2;HaplotypeScore=63.5730;InbreedingCoeff=0.9921;MQ=86.20;MQ0=0;MQRankSum=-8.018;QD=35.37;ReadPosRankSum=3.143;VQSLOD=5.3804;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,37:41:93.30:1206,93,0	0/0:4,0:4:12.02:0,12,159	0/0:32,0:32:76.48:0,76,1297	0/0:24,0:23:66.12:0,66,907	1/1:0,17:17:51.17:660,51,0	0/0:39,0:39:99:0,117,1697	0/0:34,0:34:96.28:0,96,1355	0/0:37,0:37:99:0,108,1573	0/0:22,0:22:66.21:0,66,965	0/0:27,0:27:75.23:0,75,1069	0/0:5,0:5:15.05:0,15,224	0/0:23,0:23:66.21:0,66,967	0/0:28,0:28:84.27:0,84,1238	0/0:26,0:26:78.19:0,78,1085	0/0:27,0:27:81.26:0,81,1191	0/0:29,0:29:84.22:0,84,1180	0/0:33,0:33:99:0,99,1483	1/1:0,15:15:42.14:545,42,0	1/1:0,22:22:66.21:846,66,0	1/1:0,19:19:54.18:701,54,0	1/1:0,36:36:99:1285,99,0	0/0:11,0:11:33.11:0,33,494	0/0:7,0:7:21.02:0,21,252	0/0:20,0:20:57.18:0,57,834	1/1:0,8:8:24.08:312,24,0	1/1:0,20:20:57.18:737,57,0	1/1:0,32:32:87.28:1129,87,0	1/1:0,13:13:36.12:467,36,0
chr10	76416096	.	GGCAGGA	G	10498.98	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=11.221;DP=634;FS=2.606;HRun=0;HaplotypeScore=134.1662;InbreedingCoeff=0.9087;MQ=64.52;MQ0=2;MQRankSum=-10.808;QD=22.43;ReadPosRankSum=-0.555;VQSLOD=4.7308;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,24:41:33.07:579,33,0	1/1:0,12:12:27.05:517,27,0	0/0:40,0:31:43.39:0,43,1138	0/0:18,0:17:23.07:0,23,725	1/1:7,14:21:23.54:255,24,0	1/1:8,14:22:24.08:514,24,0	1/1:6,19:25:30.10:542,30,0	1/1:13,10:23:30.06:489,30,0	0/1:18,0:18:6.55:7,0,1218	1/1:7,11:18:30.04:519,30,0	1/1:10,8:18:15.05:275,15,0	0/0:22,0:22:51.08:0,51,1459	0/0:21,0:21:45.14:0,45,1231	1/1:8,11:19:24.08:489,24,0	1/1:5,21:26:45.15:914,45,0	1/1:4,19:23:33.11:707,33,0	1/1:13,15:28:15.05:321,15,0	1/1:8,14:22:27.05:532,27,0	1/1:6,12:18:36.08:657,36,0	1/1:11,14:25:36.08:635,36,0	1/1:13,21:34:11.73:150,12,0	0/0:14,0:14:15.05:0,15,500	0/0:17,0:17:39.13:0,39,1228	0/0:33,0:33:75.26:0,75,2316	1/1:4,13:17:30.10:617,30,0	1/1:9,14:23:39.12:776,39,0	1/1:3,15:18:29.62:618,30,0	1/1:3,14:17:18.06:386,18,0
chr10	76416600	.	CTTAT	C	874.29	PASS	AB=1.000;AC=19;AF=0.500;AN=38;BaseQRankSum=-0.725;DP=296;FS=0.000;HRun=0;HaplotypeScore=48.8580;InbreedingCoeff=0.6245;MQ=61.91;MQ0=0;MQRankSum=-0.111;QD=7.11;ReadPosRankSum=0.930;VQSLOD=1.6584;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:21.07:0,21,484	1/1:8,1:9:3.01:46,3,0	./.	./.	0/0:7,0:7:3.01:0,3,70	1/1:8,6:14:12.04:184,12,0	1/1:11,0:11:6.01:71,6,0	0/1:29,0:29:0:0,0,0	1/1:4,1:5:3.01:46,3,0	./.	./.	1/1:5,2:7:3.01:46,3,0	1/1:5,3:8:9.03:138,9,0	1/1:5,2:7:3.01:46,3,0	1/1:5,3:8:6.02:92,6,0	./.	1/1:13,11:25:24.07:349,24,0	0/0:14,0:23:27.07:0,27,460	0/0:21,0:22:9.03:0,9,174	./.	0/0:12,0:12:3.01:0,3,43	./.	./.	./.	0/0:9,0:9:9.03:0,9,209	0/0:8,0:11:9.03:0,9,157	0/0:13,0:15:6.02:0,6,105	0/0:4,0:11:9.03:0,9,157
chr10	76418096	.	GC	G	619.47	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.901;DP=537;FS=2.613;HRun=1;HaplotypeScore=68.4287;InbreedingCoeff=0.9977;MQ=80.56;MQ0=0;MQRankSum=-3.119;QD=21.36;ReadPosRankSum=1.070;VQSLOD=3.8537;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:29:74.13:714,74,0	0/0:9,0:9:27.09:0,27,386	0/0:19,0:19:52.83:0,53,616	0/0:18,0:19:37.83:0,38,586	0/0:23,0:23:69.11:0,69,975	0/0:15,0:15:42.12:0,42,615	0/0:27,0:27:81.15:0,81,1140	0/0:31,0:31:82.43:0,82,1140	0/0:20,0:20:60.10:0,60,838	0/0:10,0:10:30.10:0,30,454	0/0:18,0:18:51.07:0,51,685	0/0:15,0:15:45.14:0,45,659	0/0:11,0:11:33.06:0,33,457	0/0:16,0:16:48.12:0,48,671	0/0:13,0:13:39.12:0,39,575	0/0:20,0:20:57.14:0,57,843	0/0:33,0:33:99:0,99,1452	0/0:22,0:22:66.22:0,66,977	0/0:15,0:15:45.15:0,45,684	0/0:19,0:19:54.18:0,54,816	0/0:26,0:26:78.22:0,78,1132	0/0:17,0:17:51.16:0,51,747	0/0:18,0:18:54.18:0,54,818	0/0:22,0:22:66.22:0,66,1007	0/0:21,0:21:59.84:0,60,847	0/0:21,0:21:63.21:0,63,937	0/0:17,0:17:51.17:0,51,772	0/0:11,0:11:33.09:0,33,480
chr10	76418100	.	GGGA	G	780.13	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.359;DP=540;FS=3.944;HRun=0;HaplotypeScore=90.3090;InbreedingCoeff=0.9979;MQ=79.77;MQ0=0;MQRankSum=-3.802;QD=26.00;ReadPosRankSum=1.532;VQSLOD=3.6595;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,22:30:69.10:875,69,0	0/0:9,0:9:27.09:0,27,562	0/0:17,0:17:41.73:0,42,813	0/0:21,0:21:57.14:0,57,1030	0/0:21,0:21:57.16:0,57,1144	0/0:13,0:13:36.12:0,36,758	0/0:28,0:28:78.23:0,78,1548	0/0:27,0:27:75.24:0,75,1554	0/0:19,0:19:51.17:0,51,1107	0/0:13,0:13:39.13:0,39,751	0/0:15,0:15:42.13:0,42,857	0/0:14,0:14:42.14:0,42,908	0/0:12,0:12:33.11:0,33,678	0/0:15,0:15:45.14:0,45,915	0/0:15,0:15:45.15:0,45,953	0/0:21,0:21:57.18:0,57,1195	0/0:32,0:32:96.33:0,96,2083	0/0:23,0:23:66.17:0,66,1298	0/0:17,0:17:48.14:0,48,954	0/0:22,0:22:60.20:0,60,1212	0/0:28,0:28:84.26:0,84,1686	0/0:17,0:17:48.16:0,48,993	0/0:18,0:18:54.13:0,54,1078	0/0:23,0:23:69.21:0,69,1431	0/0:21,0:21:51.16:0,51,1079	0/0:20,0:20:60.20:0,60,1265	0/0:19,0:19:57.19:0,57,1196	0/0:10,0:10:30.10:0,30,651
chr10	76418479	.	TGGCAACTGCAGGGCCTGCCTTC	T	29443.64	PASS	AC=36;AF=0.667;AN=54;BaseQRankSum=16.342;DP=420;FS=1.687;HRun=0;HaplotypeScore=276.8964;InbreedingCoeff=0.9843;MQ=85.60;MQ0=0;MQRankSum=-15.570;QD=141.56;ReadPosRankSum=4.624;VQSLOD=4.4521;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,148,13734	1/1:0,9:10:27.09:1587,27,0	0/0:19,0:19:54.18:0,54,3073	0/0:16,0:16:48.03:0,48,2738	1/1:0,12:12:21.07:664,21,0	1/1:0,14:14:27.09:1583,27,0	1/1:0,8:8:21.07:1320,21,0	1/1:0,4:4:12.04:465,12,0	0/0:25,0:25:75.26:0,75,7217	1/1:0,12:12:36.12:2179,36,0	1/1:0,8:8:24.08:1131,24,0	0/0:22,0:22:66.23:0,66,5975	0/0:16,0:16:45.15:0,45,3756	1/1:0,9:9:24.08:1509,24,0	1/1:0,18:18:54.19:3145,54,0	1/1:0,12:12:36.12:2263,36,0	1/1:1,9:10:21.07:1300,21,0	1/1:0,11:11:24.08:1509,24,0	1/1:0,10:10:30.09:1595,30,0	1/1:0,16:16:33.11:1942,33,0	1/1:0,10:10:12.04:254,12,0	0/0:25,0:25:75.26:0,75,6534	0/0:16,0:16:48.16:0,48,3994	0/0:24,0:24:72.25:0,72,6940	1/1:0,8:8:15.05:818,15,0	1/1:0,15:15:45.15:2738,45,0	1/1:0,21:21:60.21:3442,60,0	./.
chr10	76418884	.	GCAACA	G	1943.39	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.811;DP=723;FS=1.465;HRun=0;HaplotypeScore=134.3582;InbreedingCoeff=0.9959;MQ=86.76;MQ0=0;MQRankSum=-4.028;QD=49.83;ReadPosRankSum=3.262;VQSLOD=4.0609;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:93.32:2038,93,0	0/0:8,0:8:21.07:0,21,651	0/0:29,0:29:87.23:0,87,2217	0/0:31,0:31:83.84:0,84,2022	0/0:20,0:20:57.20:0,57,1752	0/0:26,0:26:78.27:0,78,2418	0/0:24,0:24:72.22:0,72,2157	0/0:27,0:27:78.26:0,78,2303	0/0:33,0:33:93.31:0,93,2857	0/0:26,0:26:78.27:0,78,2473	0/0:17,0:17:51.06:0,51,1488	0/0:27,0:27:81.28:0,81,2519	0/0:31,0:31:93.26:0,93,2636	0/0:21,0:21:63.22:0,63,1936	0/0:21,0:21:63.17:0,63,1813	0/0:15,0:15:42.14:0,42,1354	0/0:32,0:32:93.32:0,93,2931	0/0:28,0:28:84.25:0,84,2614	0/0:29,0:29:87.30:0,87,2600	0/0:16,0:16:45.13:0,45,1250	0/0:60,0:60:99:0,181,5562	0/0:18,0:18:54.19:0,54,1734	0/0:25,0:25:75.17:0,75,2203	0/0:31,0:31:90.31:0,90,2870	0/0:15,0:15:45.09:0,45,1301	0/0:21,0:21:63.18:0,63,1818	0/0:39,0:38:99:0,117,3552	0/0:14,0:14:42.14:0,42,1354
chr10	76419275	.	CCTT	C	81.10	PASS	AB=0.945;AC=6;AF=0.107;AN=56;BaseQRankSum=-7.599;DP=527;FS=23.291;HRun=0;HaplotypeScore=86.0834;InbreedingCoeff=0.0604;MQ=39.23;MQ0=60;MQRankSum=-8.024;QD=0.77;ReadPosRankSum=-2.699;VQSLOD=-0.2300;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:14:42.13:0,42,532	0/1:3,0:3:11.92:12,0,28	0/0:7,0:2:5.88:0,6,54	0/0:4,1:1:3.01:0,3,39	0/0:15,0:11:16.72:0,17,245	0/0:20,0:19:11.80:0,12,346	0/1:18,7:23:46.36:91,0,46	1/1:30,0:13:1.43:33,1,0	0/0:16,0:15:41.92:0,42,536	0/0:20,0:15:21.05:0,21,342	0/0:13,0:12:17.36:0,17,152	0/0:21,0:19:36.69:0,37,539	0/0:9,0:8:20.94:0,21,226	0/0:15,0:13:16.60:0,17,310	0/0:15,1:13:14.39:0,14,234	0/1:21,0:16:4.60:5,0,230	0/0:9,0:8:1.43:0,1,84	0/0:16,0:12:32.93:0,33,363	0/1:26,0:14:50.65:51,0,176	0/0:21,0:19:30.90:0,31,362	0/0:31,0:24:44.22:0,44,387	0/0:15,0:14:8.24:0,8,210	0/0:16,0:13:30.96:0,31,355	0/0:56,0:55:99:0,114,1519	0/0:26,0:21:49.67:0,50,556	0/0:31,0:28:70.33:0,70,956	0/0:20,0:17:40.32:0,40,522	0/0:3,0:2:6.02:0,6,123
chr10	76419293	.	CCTT	C	1117.40	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=2.901;DP=469;FS=1.497;HRun=0;HaplotypeScore=84.8094;InbreedingCoeff=-0.1304;MQ=46.82;MQ0=31;MQRankSum=-1.816;QD=3.78;ReadPosRankSum=2.889;VQSLOD=1.8208;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:18:53.94:0,54,848	0/1:6,0:5:2.30:35,0,2	0/0:21,0:9:3.36:0,3,138	0/1:13,0:6:6.04:6,0,118	0/1:15,0:11:18.31:18,0,50	0/1:19,0:18:56.85:57,0,68	1/1:18,0:16:9.80:162,10,0	1/1:9,4:12:11.35:60,11,0	0/0:16,0:15:38.97:0,39,641	0/1:10,0:9:18.44:18,0,47	0/1:9,0:8:20.35:36,0,20	0/0:21,0:20:35.97:0,36,586	0/0:8,0:7:17.37:0,17,285	0/1:12,0:10:24.87:25,0,50	0/1:13,0:10:1.62:55,0,2	0/1:18,0:14:17.77:73,0,18	1/1:11,0:9:2.15:71,2,0	0/1:14,0:10:29.48:71,0,29	1/1:15,0:11:3.29:77,3,0	0/1:19,0:19:51.34:79,0,51	0/1:27,0:21:24.92:130,0,25	0/0:14,0:13:17.90:0,18,238	0/0:15,0:12:29.78:0,30,537	0/0:50,0:50:99:0,102,1740	0/1:19,0:16:32.74:71,0,33	0/1:26,0:24:99:113,0,161	0/1:19,0:16:44.81:126,0,45	0/0:3,0:2:5.95:0,6,42
chr10	76419296	.	TCTC	T	2029.27	PASS	AB=0.883;AC=17;AF=0.327;AN=52;BaseQRankSum=3.078;DP=430;FS=14.636;HRun=0;HaplotypeScore=80.0316;InbreedingCoeff=0.5856;MQ=52.52;MQ0=31;MQRankSum=-1.099;QD=11.15;ReadPosRankSum=2.145;VQSLOD=1.9663;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:19:51.16:0,51,912	0/0:6,0:5:0.72:0,1,2	0/1:23,0:11:5.75:6,0,197	0/0:15,0:7:16.39:0,16,204	1/1:8,5:9:11.94:124,12,0	0/0:15,0:14:2.88:0,3,15	0/1:16,0:14:18.14:38,0,18	./.	0/0:16,0:15:27.09:0,27,538	0/0:7,0:6:3:0,3,29	0/0:7,0:7:5.86:0,6,35	0/0:18,0:17:27.09:0,27,520	0/0:9,0:8:17.99:0,18,293	0/0:10,0:8:0:0,0,0	0/0:9,0:8:5.47:0,5,25	0/0:13,0:10:0:0,0,0	0/0:11,0:9:5.35:0,5,31	1/1:6,7:9:18.03:238,18,0	1/1:9,5:10:13.30:213,13,0	1/1:9,5:14:15.05:212,15,0	0/1:12,14:20:7.80:337,0,8	0/0:12,0:11:18.06:0,18,321	0/0:14,0:11:26.86:0,27,527	0/0:48,0:48:75.21:0,75,1465	1/1:12,7:16:20.98:257,21,0	1/1:17,8:23:26.14:433,26,0	1/1:14,5:17:24.03:347,24,0	./.
chr10	76419327	.	CGT	C	873.32	PASS	AB=0.850;AC=29;AF=0.558;AN=52;BaseQRankSum=0.942;DP=410;FS=2.615;HRun=0;HaplotypeScore=94.7046;InbreedingCoeff=0.5680;MQ=67.10;MQ0=12;MQRankSum=-3.446;QD=4.82;ReadPosRankSum=-0.714;VQSLOD=2.8275;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:30:0,30,299	./.	0/0:26,0:16:0:0,0,0	0/0:22,0:16:3.01:0,3,33	1/1:6,0:10:2.81:14,3,0	0/1:6,1:9:29.99:88,0,30	1/1:8,6:15:8.86:80,9,0	1/1:13,0:12:8.98:73,9,0	0/0:8,0:15:11.97:0,12,98	1/1:6,4:11:6.58:130,7,0	1/1:4,6:9:9.02:99,9,0	0/0:11,0:19:12:0,12,105	0/0:5,0:10:15:0,15,135	1/1:0,1:2:3.01:33,3,0	1/1:5,2:6:5.85:47,6,0	0/0:5,0:4:3:0,3,26	1/1:3,7:11:17.88:178,18,0	0/1:13,0:14:7.79:19,0,8	./.	1/1:8,0:13:16.49:76,16,0	0/1:20,0:20:0:0,0,0	0/0:13,0:15:24:0,24,225	0/0:8,0:12:3:0,3,26	0/0:34,0:48:32.04:0,32,293	1/1:7,0:12:8.52:42,9,0	1/1:10,0:15:14.20:70,14,0	1/1:8,0:12:14.20:70,14,0	1/1:1,0:2:5.68:28,6,0
chr10	76419973	.	C	CAACA	2247.81	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.857;DP=691;FS=0.689;HRun=0;HaplotypeScore=131.8420;InbreedingCoeff=0.9681;MQ=83.85;MQ0=0;MQRankSum=-6.780;QD=62.44;ReadPosRankSum=0.383;VQSLOD=5.5020;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:36:93.15:2343,93,0	0/0:6,0:6:12.04:0,12,229	0/0:32,0:32:95.92:0,96,1774	0/0:21,0:21:54:0,54,1008	0/0:25,0:25:75.24:0,75,1506	0/0:20,0:20:57.20:0,57,1195	0/0:27,0:27:78.25:0,78,1574	0/0:29,0:29:81.28:0,81,1690	0/0:32,0:32:96.33:0,96,2011	0/0:21,0:21:57.20:0,57,1171	0/0:15,0:15:45.15:0,45,938	0/0:23,0:23:69.24:0,69,1432	0/0:25,0:25:75.26:0,75,1572	0/0:16,0:16:48.16:0,48,1006	0/0:42,0:42:99:0,120,2489	0/0:24,0:24:72.25:0,72,1484	0/0:40,0:40:99:0,120,2471	0/0:25,0:25:63.22:0,63,1316	0/0:17,0:17:45.15:0,45,941	0/0:29,0:29:84.27:0,84,1702	0/0:48,0:48:99:0,141,2915	0/0:21,0:21:60.21:0,60,1257	0/0:16,0:16:48.16:0,48,982	0/0:30,0:30:87.21:0,87,1736	0/0:12,0:12:33.11:0,33,663	0/0:16,0:16:45.11:0,45,900	0/0:34,0:33:99:0,102,2072	0/0:8,0:8:24.08:0,24,493
chr10	76420180	.	CT	C	191.13	PASS	AB=0.938;AC=3;AF=0.054;AN=56;BaseQRankSum=2.372;DP=530;FS=0.000;HRun=9;HaplotypeScore=83.4638;InbreedingCoeff=0.5886;MQ=73.62;MQ0=0;MQRankSum=-3.134;QD=5.97;ReadPosRankSum=-0.028;VQSLOD=0.9499;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:17:29.99:274,30,0	0/0:14,0:14:39.11:0,39,442	0/1:14,1:12:22.14:22,0,64	0/0:7,0:7:4.72:0,5,15	0/0:32,1:33:78.23:0,78,896	0/0:14,0:14:36.11:0,36,415	0/0:15,0:15:39.09:0,39,431	0/0:35,0:35:96.75:0,97,1099	0/0:19,0:19:48.11:0,48,534	0/0:22,0:22:63.18:0,63,714	0/0:23,0:23:66.18:0,66,745	0/0:24,0:24:54.14:0,54,606	0/0:11,0:11:27.07:0,27,303	0/0:19,0:19:48.13:0,48,545	0/0:20,0:20:54.15:0,54,615	0/0:9,0:9:27.08:0,27,312	0/0:19,0:19:54.16:0,54,623	0/0:14,0:14:30.09:0,30,345	0/0:18,0:18:51.14:0,51,575	0/0:23,0:23:54.16:0,54,623	0/0:12,0:13:29.92:0,30,326	0/0:17,0:17:42.12:0,42,484	0/0:22,0:22:60.14:0,60,657	0/0:7,0:7:21.06:0,21,242	0/0:22,0:23:69.02:0,69,760	0/0:19,1:20:14.67:0,15,423	0/0:45,0:45:99:0,106,1393	0/0:11,0:11:33.08:0,33,369
chr10	76420204	.	TA	T	7764.64	PASS	AB=0.542;AC=39;AF=0.696;AN=56;BaseQRankSum=8.160;DP=522;FS=1.984;HRun=11;HaplotypeScore=72.1118;InbreedingCoeff=0.8606;MQ=74.26;MQ0=1;MQRankSum=-1.692;QD=19.32;ReadPosRankSum=2.069;VQSLOD=6.0093;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:50.89:419,51,0	1/1:2,14:16:41.94:345,42,0	0/0:18,0:13:3.27:0,3,64	0/0:7,2:7:6.07:0,6,35	1/1:2,28:30:80.89:665,81,0	0/1:2,11:13:27.90:210,0,28	1/1:3,10:14:25.99:203,26,0	1/1:8,26:34:74.88:613,75,0	0/0:18,0:18:42.09:0,42,440	1/1:4,21:26:58.94:474,59,0	1/1:4,19:23:56.92:468,57,0	0/0:17,0:17:51.13:0,51,544	0/0:17,2:19:29.45:0,29,501	1/1:1,14:17:43.98:350,44,0	1/1:1,26:27:70.96:573,71,0	1/1:2,11:13:32.95:271,33,0	1/1:3,12:15:35.95:296,36,0	1/1:0,9:9:20.98:172,21,0	1/1:5,16:21:53.89:438,54,0	1/1:4,21:25:21.93:387,22,0	1/1:1,6:7:17.98:148,18,0	0/0:15,1:16:14.44:0,14,345	0/0:18,0:18:39.10:0,39,415	0/0:5,0:5:15.03:0,15,153	1/1:3,19:24:58.01:455,58,0	1/1:0,16:16:47.95:394,48,0	1/1:4,31:36:57.03:664,57,0	1/1:3,9:12:26.95:222,27,0
chr10	76421804	.	CT	C	5540.53	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=12.647;DP=584;FS=11.035;HRun=7;HaplotypeScore=57.9251;InbreedingCoeff=0.9764;MQ=70.73;MQ0=0;MQRankSum=1.706;QD=25.77;ReadPosRankSum=-0.229;VQSLOD=4.6032;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.20:0,63,793	1/1:1,5:6:15.03:152,15,0	0/0:19,0:14:21.40:0,21,317	0/0:19,0:16:12.57:0,13,192	0/0:24,0:24:66.16:0,66,799	1/1:0,27:27:63.14:643,63,0	1/1:2,7:9:21.04:214,21,0	1/1:4,32:36:96.20:969,96,0	0/0:22,0:22:60.19:0,60,755	1/1:1,32:33:96.21:973,96,0	1/1:2,19:21:51.11:520,51,0	0/0:21,0:21:63.20:0,63,792	0/0:17,0:17:51.16:0,51,642	1/1:0,15:16:27.14:356,27,0	1/1:1,24:25:66.15:673,66,0	1/1:0,15:15:33.08:337,33,0	1/1:3,24:27:69.15:704,69,0	0/0:21,0:21:54.17:0,54,677	0/0:35,0:35:99:0,102,1242	0/0:27,0:27:69.21:0,69,855	0/0:11,0:11:27.09:0,27,339	0/0:2,0:2:6.02:0,6,75	0/0:14,0:14:39.10:0,39,465	0/0:10,0:10:27.09:0,27,339	0/0:28,0:28:81.25:0,81,1008	0/0:25,1:26:44.58:0,45,857	0/0:30,0:30:81.25:0,81,1004	0/0:20,0:20:54.13:0,54,661
chr10	76422277	.	G	GT	4494.45	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=1.351;DP=629;FS=2.042;HRun=8;HaplotypeScore=127.0813;InbreedingCoeff=0.6952;MQ=62.35;MQ0=13;MQRankSum=-0.765;QD=14.98;ReadPosRankSum=-2.425;VQSLOD=3.7173;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:65.98:0,66,562	1/1:9,0:9:26.11:218,26,0	0/0:32,0:12:21.03:0,21,184	0/0:32,0:19:14.39:0,14,127	0/1:34,0:32:48.24:48,0,105	1/1:14,2:15:34.32:398,34,0	1/1:14,1:15:28.72:247,29,0	1/1:29,2:29:60.35:624,60,0	0/0:24,0:24:60.68:0,61,536	1/1:27,1:28:70.20:720,70,0	1/1:23,0:22:46.68:427,47,0	0/0:13,0:13:36.02:0,36,337	0/0:13,0:13:27:0,27,247	1/1:15,1:16:25.76:223,26,0	1/1:14,2:16:44.57:395,45,0	1/1:18,2:20:30.57:422,31,0	1/1:26,3:28:69.53:689,70,0	0/0:18,0:18:0.06:0,0,60	0/1:32,0:30:18.51:19,0,93	0/0:31,0:30:32.42:0,32,159	0/0:14,0:14:17.95:0,18,86	0/0:17,0:17:31.55:0,32,313	0/0:15,0:15:38.40:0,38,323	0/0:19,0:19:40.58:0,41,340	0/0:21,0:21:5.71:0,6,86	0/1:31,0:30:64.35:64,0,113	0/0:38,0:38:4.39:0,4,181	0/0:6,0:6:7.32:0,7,24
chr10	76422283	.	TTGG	T	5353.99	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=0.061;DP=635;FS=12.872;HRun=0;HaplotypeScore=148.9656;InbreedingCoeff=0.6985;MQ=61.32;MQ0=13;MQRankSum=-3.691;QD=16.42;ReadPosRankSum=-6.368;VQSLOD=1.9162;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:40.87:0,41,692	1/1:9,0:9:26.96:270,27,0	0/0:33,0:11:16.20:0,16,293	0/1:36,0:19:35.63:36,0,167	0/0:32,0:30:8.20:0,8,321	1/1:16,0:15:43.68:415,44,0	1/1:16,0:16:29.96:328,30,0	1/1:31,0:29:76:833,76,0	0/0:23,0:23:65.53:0,66,1058	1/1:18,11:29:81.03:896,81,0	1/1:22,0:21:53.77:555,54,0	0/0:14,0:14:39.13:0,39,607	0/0:15,0:15:29.86:0,30,433	1/1:15,0:15:29.59:291,30,0	1/1:17,0:17:46.60:447,47,0	1/1:21,0:21:7.70:517,8,0	1/1:30,0:29:75.88:691,76,0	0/0:16,0:16:21.34:0,21,162	0/1:30,0:28:8.76:9,0,220	0/0:31,0:30:38.14:0,38,361	0/0:13,0:13:27.73:0,28,198	0/0:17,0:17:47.88:0,48,697	0/0:17,0:17:44.77:0,45,588	0/0:18,0:18:41.96:0,42,617	0/1:21,0:21:2.55:3,0,185	0/1:33,0:32:64.19:64,0,235	0/0:41,0:41:27.71:0,28,533	0/0:5,0:5:3.96:0,4,34
chr10	76422284	.	TGG	T	6557.52	PASS	AB=0.977;AC=25;AF=0.446;AN=56;BaseQRankSum=-1.036;DP=632;FS=14.729;HRun=2;HaplotypeScore=133.6155;InbreedingCoeff=0.6111;MQ=61.23;MQ0=13;MQRankSum=-3.103;QD=18.68;ReadPosRankSum=-7.020;VQSLOD=-0.2929;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:32.08:0,32,625	1/1:4,5:9:27.08:336,27,0	0/0:35,0:11:10.38:0,10,269	0/1:33,1:18:44.89:45,0,179	0/1:31,1:30:16.61:17,0,142	1/1:10,6:15:45.04:529,45,0	1/1:1,15:16:30.08:421,30,0	1/1:14,15:28:80.78:954,81,0	0/0:23,0:23:65.20:0,65,918	1/1:12,16:28:81.22:1015,81,0	1/1:1,20:21:54.14:701,54,0	0/0:14,0:14:39.13:0,39,560	0/0:14,0:14:29.98:0,30,381	1/1:2,8:15:30.04:355,30,0	1/1:12,4:17:48.01:569,48,0	1/1:14,5:20:15.28:631,15,0	1/1:17,11:28:78.59:863,79,0	0/0:18,0:18:18.23:0,18,84	0/1:30,0:28:28.68:29,0,71	0/0:32,0:31:30.59:0,31,185	0/0:13,0:13:19.93:0,20,103	0/0:17,0:17:47.62:0,48,584	0/0:17,0:17:42.91:0,43,518	0/0:18,0:18:41.95:0,42,530	0/1:21,0:21:8.70:9,0,74	0/1:31,1:31:85.70:86,0,94	0/0:41,0:41:10.79:0,11,257	0/0:5,0:5:3.24:0,3,17
chr10	76422285	.	GGTT	G	2691.01	PASS	AB=0.935;AC=20;AF=0.357;AN=56;BaseQRankSum=5.619;DP=641;FS=3.937;HRun=0;HaplotypeScore=159.6504;InbreedingCoeff=0.8711;MQ=61.78;MQ0=13;MQRankSum=-4.899;QD=11.26;ReadPosRankSum=-2.867;VQSLOD=2.9724;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:37.62:0,38,409	1/1:9,0:9:21.28:161,21,0	0/0:36,0:12:29.70:0,30,245	0/1:37,0:18:9.31:9,0,187	0/0:32,0:30:59.87:0,60,708	1/1:15,1:15:18.45:205,18,0	1/1:16,0:16:26.60:199,27,0	1/1:30,1:30:45.55:433,46,0	0/0:24,0:24:70.97:0,71,1187	1/1:28,0:28:77.12:523,77,0	1/1:22,0:21:47.10:352,47,0	0/0:15,0:15:42.06:0,42,643	0/0:13,0:13:29.95:0,30,457	1/1:14,0:15:17.22:126,17,0	1/1:15,2:17:27.38:282,27,0	0/1:17,2:20:2.37:263,0,2	1/1:28,0:27:51.55:353,52,0	0/0:17,0:18:43.91:0,44,354	0/0:31,0:29:59.69:0,60,568	0/0:32,0:31:74.34:0,74,758	0/0:13,0:13:34.57:0,35,347	0/0:17,0:17:47.73:0,48,853	0/0:18,0:18:47.59:0,48,701	0/0:18,0:18:45.06:0,45,793	0/0:22,0:22:52.54:0,53,491	0/0:30,0:29:15.62:0,16,518	0/0:42,0:43:70.72:0,71,1034	0/0:5,0:5:11.44:0,11,86
chr10	76422286	.	GTT	G	841.38	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=6.057;DP=641;FS=9.123;HRun=17;HaplotypeScore=155.2068;InbreedingCoeff=0.4950;MQ=61.59;MQ0=13;MQRankSum=-3.722;QD=3.57;ReadPosRankSum=0.045;VQSLOD=-0.7268;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,17:33:15.93:159,16,0	0/1:9,0:9:5.35:46,0,5	0/0:39,0:12:12.54:0,13,57	0/0:35,0:17:5.19:0,5,74	0/0:31,0:30:60.54:0,61,455	0/1:16,0:15:17.51:60,0,18	1/1:16,0:16:20.02:113,20,0	0/1:31,0:30:35.81:69,0,36	0/0:23,1:24:27.38:0,27,553	0/1:29,0:29:17.06:124,0,17	1/1:22,0:21:9.79:122,10,0	0/0:15,0:16:29.54:0,30,317	0/0:8,0:13:15.04:0,15,179	1/1:15,0:15:4.46:30,4,0	1/1:17,0:17:15.18:122,15,0	0/1:19,0:20:15.12:81,0,15	1/1:27,0:26:2.94:97,3,0	0/0:17,0:17:33.12:0,33,236	0/0:29,0:27:63.05:0,63,441	0/0:32,0:31:68.08:0,68,515	0/0:14,0:14:32.77:0,33,265	0/0:12,0:17:42.01:0,42,439	0/0:18,0:18:33.73:0,34,329	0/0:14,0:20:41.38:0,41,417	0/0:22,0:22:47.44:0,47,355	0/0:30,0:29:43.71:0,44,376	0/0:41,0:41:74.79:0,75,719	0/0:5,0:5:5.97:0,6,45
chr10	76422288	.	T	TG	1560.17	PASS	AB=0.777;AC=18;AF=0.321;AN=56;BaseQRankSum=7.120;DP=646;FS=2.120;HRun=0;HaplotypeScore=142.3361;InbreedingCoeff=0.7402;MQ=60.45;MQ0=14;MQRankSum=-2.144;QD=7.72;ReadPosRankSum=-0.654;VQSLOD=3.7066;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:67.76:0,68,537	1/1:4,4:8:6.32:90,6,0	0/0:42,0:12:31.60:0,32,251	0/0:36,0:16:7.16:0,7,159	0/0:33,0:31:79.96:0,80,789	1/1:11,5:15:9.83:133,10,0	1/1:9,7:16:6.82:140,7,0	0/1:22,10:31:62:206,0,62	0/0:24,0:24:69.33:0,69,716	1/1:13,15:28:14.22:346,14,0	1/1:12,10:21:9.43:214,9,0	0/0:16,0:16:45.02:0,45,460	0/0:14,0:14:28.54:0,29,237	1/1:10,5:15:3.89:48,4,0	1/1:13,4:17:23.83:193,24,0	0/1:14,5:19:12.54:135,0,13	1/1:19,10:28:12.72:247,13,0	0/0:16,0:16:39.05:0,39,380	0/0:28,0:26:75.86:0,76,815	0/0:32,0:31:89.76:0,90,939	0/0:14,0:14:42.01:0,42,470	0/0:17,0:17:40.92:0,41,389	0/0:18,0:18:44.85:0,45,402	0/0:20,0:20:41.51:0,42,386	0/0:21,0:21:62.56:0,63,660	0/0:28,1:28:36.13:0,36,793	0/0:41,0:41:99:0,122,1309	0/0:5,0:5:12.01:0,12,127
chr10	76422594	.	C	CA	8949.03	PASS	AB=0.935;AC=21;AF=0.375;AN=56;BaseQRankSum=-14.675;DP=626;FS=7.849;HRun=1;HaplotypeScore=59.9671;InbreedingCoeff=0.9282;MQ=88.40;MQ0=0;MQRankSum=-2.861;QD=37.44;ReadPosRankSum=1.527;VQSLOD=5.0535;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,1870	1/1:0,11:11:33.11:495,33,0	0/0:24,0:25:60.70:0,61,670	0/0:21,0:20:48.15:0,48,605	0/0:22,0:22:63.20:0,63,817	1/1:0,21:21:63.21:944,63,0	1/1:0,20:20:57.19:854,57,0	1/1:2,16:18:12.20:675,12,0	0/0:20,0:20:60.16:0,60,749	1/1:0,22:22:66.22:989,66,0	1/1:1,13:14:42.14:620,42,0	0/0:17,0:17:51.15:0,51,647	0/0:21,0:21:63.20:0,63,818	1/1:2,16:18:45.15:675,45,0	1/1:1,34:35:99:1529,102,0	1/1:1,20:21:57.19:854,57,0	1/1:0,30:30:87.29:1304,87,0	0/0:24,0:24:69.22:0,69,893	0/0:21,0:21:57.18:0,57,739	0/0:24,0:24:66.21:0,66,857	0/0:34,0:34:99:0,99,1284	0/0:26,0:26:75.24:0,75,973	0/0:18,0:18:54.18:0,54,701	0/0:15,0:14:45.15:0,45,584	0/0:18,0:18:54.18:0,54,701	0/1:27,2:29:8.71:9,0,868	0/0:16,0:16:48.16:0,48,622	0/0:17,0:17:51.17:0,51,662
chr10	76424513	.	CA	C	2492.01	PASS	AB=0.988;AC=34;AF=0.607;AN=56;BaseQRankSum=15.201;DP=678;FS=1.808;HRun=1;HaplotypeScore=107.3801;InbreedingCoeff=0.5636;MQ=79.47;MQ0=0;MQRankSum=-3.368;QD=4.80;ReadPosRankSum=6.473;VQSLOD=0.6093;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:45,1:46:60.97:326,61,0	1/1:11,0:11:23.01:66,23,0	0/0:19,0:19:53.74:0,54,615	0/0:15,0:15:45.15:0,45,627	1/1:25,0:25:5.41:89,5,0	0/1:21,0:21:4.54:74,0,5	0/1:31,1:32:98.49:136,0,98	0/1:29,0:29:30.79:31,0,91	0/0:15,0:15:45.11:0,45,601	1/1:26,0:26:6.94:53,7,0	1/1:17,1:18:13.43:118,13,0	0/0:21,0:21:62.85:0,63,828	0/0:19,0:19:57.14:0,57,747	1/1:27,0:27:10.93:162,11,0	0/1:24,0:24:0.51:89,0,1	1/1:24,0:24:17.04:121,17,0	0/1:32,0:32:89.10:116,0,89	1/1:29,0:29:43.71:205,44,0	0/1:23,1:24:42.57:43,0,59	1/1:29,0:29:22.21:165,22,0	1/1:29,0:29:54.99:160,55,0	0/0:21,0:21:59.77:0,60,796	0/0:27,0:27:78.23:0,78,1080	0/0:22,0:22:63.17:0,63,859	1/1:20,0:20:44.87:148,45,0	1/1:30,1:31:32.11:217,32,0	1/1:30,0:30:53.15:302,53,0	1/1:12,0:12:25.69:74,26,0
chr10	76424514	.	AC	A	14024.18	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=6.844;DP=669;FS=0.000;HRun=7;HaplotypeScore=69.0320;InbreedingCoeff=0.9999;MQ=79.72;MQ0=0;MQRankSum=-3.464;QD=27.23;ReadPosRankSum=0.991;VQSLOD=5.4706;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,43:45:99:1315,129,0	1/1:0,11:11:33.08:337,33,0	0/0:19,0:19:35.97:0,36,407	0/0:15,0:15:45.10:0,45,528	1/1:2,23:25:72.16:734,72,0	1/1:2,19:21:51.11:520,51,0	1/1:6,24:30:66.15:673,66,0	1/1:4,24:28:72.15:728,72,0	0/0:14,0:14:39.12:0,39,485	1/1:1,25:26:75.17:765,75,0	1/1:2,16:18:48.07:479,48,0	0/0:20,0:20:54.17:0,54,679	0/0:18,0:18:48.15:0,48,604	1/1:2,25:27:69.16:704,69,0	1/1:2,22:24:56.81:581,57,0	1/1:2,22:24:63.14:643,63,0	1/1:7,25:32:72.16:734,72,0	1/1:1,28:29:84.19:857,84,0	1/1:4,19:23:60.11:605,60,0	1/1:1,28:29:78.18:796,78,0	1/1:0,29:29:78.18:796,78,0	0/0:19,0:19:57.18:0,57,716	0/0:27,0:27:81.22:0,81,981	0/0:22,0:22:60.18:0,60,743	1/1:0,20:20:60.14:612,60,0	1/1:3,29:32:90.15:903,90,0	1/1:2,28:30:87.16:877,87,0	1/1:0,12:12:36.08:367,36,0
chr10	76424834	.	GT	G	6934.89	PASS	AB=0.522;AC=39;AF=0.696;AN=56;BaseQRankSum=6.596;DP=457;FS=1.455;HRun=10;HaplotypeScore=48.9116;InbreedingCoeff=0.8987;MQ=75.70;MQ0=0;MQRankSum=-1.896;QD=20.40;ReadPosRankSum=0.166;VQSLOD=5.5607;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:59.97:521,60,0	0/1:1,11:12:3.19:204,0,3	0/0:20,0:19:9.94:0,10,232	0/0:10,0:10:16.56:0,17,122	1/1:4,23:27:35.80:540,36,0	1/1:2,18:20:53.99:468,54,0	1/1:1,12:13:32.99:287,33,0	1/1:5,20:25:29.80:488,30,0	0/0:14,1:15:19.06:0,19,432	1/1:6,18:24:53.97:468,54,0	1/1:5,12:17:2.80:253,3,0	0/0:13,0:12:30.07:0,30,325	0/0:11,0:11:24.06:0,24,266	1/1:0,11:11:26.99:234,27,0	1/1:3,12:15:32.99:286,33,0	1/1:4,11:15:32.98:286,33,0	1/1:1,6:7:17.99:156,18,0	1/1:2,11:13:32.99:287,33,0	1/1:4,18:22:53.98:469,54,0	1/1:0,17:17:47.99:417,48,0	1/1:1,9:10:21:182,21,0	0/0:14,0:14:39.11:0,39,431	0/0:24,0:24:66.18:0,66,730	0/0:9,0:9:21.04:0,21,223	1/1:2,9:11:20.99:182,21,0	1/1:4,11:15:32.96:283,33,0	1/1:0,17:17:50.99:443,51,0	1/1:0,20:22:58.06:481,58,0
chr10	76424973	.	TAC	T	569.66	PASS	AB=0.955;AC=32;AF=0.762;AN=42;BaseQRankSum=5.132;DP=409;FS=4.105;HRun=0;HaplotypeScore=72.8770;InbreedingCoeff=-0.0579;MQ=72.14;MQ0=8;MQRankSum=-0.454;QD=2.09;ReadPosRankSum=-0.160;VQSLOD=1.5650;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,1:9:5.85:46,6,0	1/1:8,0:8:0.13:20,0,0	./.	./.	1/1:12,0:12:11.36:56,11,0	0/1:26,0:26:8.32:8,0,9	0/1:21,0:21:8.13:8,0,29	./.	0/1:13,0:13:16.71:17,0,86	./.	1/1:11,0:11:2.88:15,3,0	0/1:12,2:13:14.04:14,0,161	./.	1/1:15,0:15:13.99:70,14,0	1/1:11,0:11:11.36:56,11,0	0/1:14,0:14:4.54:42,0,5	1/1:20,0:20:17.04:84,17,0	1/1:12,0:12:5.68:28,6,0	./.	1/1:7,0:7:5.68:28,6,0	./.	0/1:9,2:11:26.05:26,0,38	0/0:8,0:8:6.01:0,6,62	0/1:21,2:23:43.11:43,0,175	1/1:8,0:8:4.09:17,4,0	0/1:10,0:10:0:0,0,0	1/1:20,0:19:20.83:101,21,0	1/1:6,0:6:2.84:14,3,0
chr10	76425019	.	CACA	C	656.73	PASS	AB=0.817;AC=11;AF=0.196;AN=56;BaseQRankSum=10.507;DP=480;FS=33.147;HRun=0;HaplotypeScore=99.7172;InbreedingCoeff=-0.2554;MQ=53.60;MQ0=9;MQRankSum=-2.809;QD=4.05;ReadPosRankSum=2.507;VQSLOD=0.4807;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:44.40:0,44,604	0/1:4,3:7:27.40:50,0,27	0/0:20,0:12:35.87:0,36,397	0/0:24,0:6:18.03:0,18,195	0/1:12,4:16:79.93:80,0,85	0/0:21,2:23:15.67:0,16,168	0/0:11,2:13:1.89:0,2,112	0/0:29,0:27:66.32:0,66,309	0/0:23,0:23:60.28:0,60,718	0/0:11,0:11:22.12:0,22,110	0/0:16,0:16:10.39:0,10,94	0/0:20,0:19:51.04:0,51,732	0/0:8,0:8:15.05:0,15,183	0/1:11,5:16:73:102,0,73	0/1:9,4:13:52.85:92,0,53	0/1:12,5:17:70.68:71,0,153	0/1:13,6:19:57.09:144,0,57	0/1:13,2:15:22.46:22,0,101	0/0:17,0:16:31.17:0,31,234	0/1:20,1:21:33:33,0,97	0/0:25,0:24:44.13:0,44,204	0/0:10,0:10:23.97:0,24,310	0/0:13,0:13:27.54:0,28,362	0/0:26,0:25:65.97:0,66,922	0/1:12,1:13:30.98:31,0,98	0/0:15,0:15:31.94:0,32,136	0/1:9,9:18:63.65:171,0,64	0/1:7,0:7:7.47:7,0,47
chr10	76425279	.	AC	A	11653.21	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=9.267;DP=802;FS=10.248;HRun=1;HaplotypeScore=100.1529;InbreedingCoeff=0.9994;MQ=81.62;MQ0=0;MQRankSum=-1.163;QD=38.84;ReadPosRankSum=0.778;VQSLOD=4.3567;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,2198	1/1:0,8:8:21.07:294,21,0	0/0:24,0:24:69.24:0,69,1102	0/0:34,0:34:84.47:0,84,1516	0/0:26,0:26:78.25:0,78,1220	1/1:0,34:34:96.32:1342,96,0	1/1:1,35:36:87.25:1195,87,0	1/1:0,35:35:99:1453,105,0	0/0:30,0:30:90.26:0,90,1410	1/1:0,41:41:99:1677,123,0	1/1:0,26:26:72.15:960,72,0	0/0:37,0:37:99:0,111,1773	0/0:17,0:17:51.17:0,51,812	1/1:0,25:25:72.24:1006,72,0	1/1:0,31:31:90.30:1258,90,0	1/1:1,33:34:51.41:1295,51,0	1/1:0,30:30:84.28:1174,84,0	0/0:21,0:21:63.18:0,63,980	0/0:19,0:19:57.17:0,57,856	0/0:22,0:22:62.97:0,63,923	0/0:41,0:41:99:0,120,1863	0/0:23,0:23:69.24:0,69,1100	0/0:24,0:24:69.24:0,69,1099	0/0:38,0:38:99:0,114,1815	0/0:27,0:27:81.26:0,81,1270	0/0:32,0:32:96.33:0,96,1532	0/0:29,0:29:87.27:0,87,1338	0/0:11,0:11:33.11:0,33,527
chr10	76427903	.	G	GCTGC	22055.51	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-10.886;DP=605;FS=12.432;HRun=0;HaplotypeScore=109.1173;InbreedingCoeff=0.9694;MQ=81.86;MQ0=0;MQRankSum=-9.180;QD=50.13;ReadPosRankSum=0.663;VQSLOD=5.5566;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:38:38.88:935,39,0	1/1:0,4:7:9.03:246,9,0	0/0:21,0:21:63.19:0,63,1125	0/0:18,0:18:44.52:0,45,786	1/1:2,6:15:10.76:299,11,0	1/1:13,6:19:44.79:689,45,0	1/1:2,28:33:78.27:2107,78,0	1/1:10,18:38:99:2253,108,0	0/0:20,0:20:57.20:0,57,1100	1/1:3,6:17:44.99:728,45,0	1/1:3,2:9:9.03:197,9,0	0/0:21,0:21:57.18:0,57,1025	0/0:31,0:31:84.28:0,84,1593	1/1:1,20:21:60.21:1635,60,0	1/1:1,22:23:63.22:1723,63,0	1/1:4,25:32:77.94:2086,78,0	1/1:2,14:17:45.11:1142,45,0	1/1:0,24:25:69.24:1889,69,0	1/1:15,7:22:39.58:875,40,0	1/1:5,8:14:21.07:529,21,0	1/1:7,23:42:47.91:1247,48,0	0/0:13,0:13:33.06:0,33,471	0/0:24,0:24:67.95:0,68,888	0/0:17,0:17:48.16:0,48,930	1/1:2,6:12:15.05:410,15,0	1/1:6,9:22:55.20:959,55,0	1/1:4,21:26:60.21:1613,60,0	1/1:0,8:8:18.06:492,18,0
chr10	76428209	.	T	TG	7335.59	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-2.087;DP=405;FS=1.330;HRun=6;HaplotypeScore=50.8917;InbreedingCoeff=0.9828;MQ=87.07;MQ0=0;MQRankSum=-4.409;QD=30.82;ReadPosRankSum=2.204;VQSLOD=5.3934;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.16:0,75,762	1/1:1,8:9:24.08:302,24,0	0/0:28,0:27:50.81:0,51,470	0/0:19,0:18:12.02:0,12,285	1/1:0,11:11:27.09:340,27,0	1/1:4,9:13:24.08:302,24,0	1/1:2,16:18:36.12:453,36,0	1/1:3,11:13:30.10:376,30,0	0/0:12,0:12:36.08:0,36,367	1/1:1,10:11:33.09:401,33,0	1/1:0,9:9:24.08:302,24,0	0/0:11,0:11:33.08:0,33,337	0/0:17,0:17:45.09:0,45,452	1/1:0,11:11:27.09:340,27,0	1/1:0,18:18:51.16:641,51,0	1/1:1,7:8:21.07:264,21,0	1/1:0,15:14:33.11:415,33,0	1/1:1,5:6:9.03:113,9,0	1/1:3,8:11:24.08:302,24,0	1/1:0,11:11:27.09:340,27,0	1/1:1,15:16:48.15:594,48,0	0/0:14,0:14:36.07:0,36,362	0/0:18,0:18:45.08:0,45,450	0/0:20,0:20:51.11:0,51,520	1/1:1,7:8:21.07:258,21,0	1/1:1,14:15:42.13:528,42,0	1/1:0,19:19:48.15:603,48,0	1/1:2,13:15:39.09:463,39,0
chr10	76428531	.	C	CTTTT	7375.79	PASS	AB=0.778;AC=36;AF=0.643;AN=56;BaseQRankSum=-0.657;DP=441;FS=8.943;HRun=11;HaplotypeScore=81.4244;InbreedingCoeff=0.8199;MQ=69.93;MQ0=2;MQRankSum=-4.621;QD=22.08;ReadPosRankSum=-2.884;VQSLOD=2.0487;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:28:7.98:0,8,106	0/1:2,0:2:0:0,0,0	0/0:8,0:8:8.93:0,9,99	0/0:12,0:10:5:0,5,80	1/1:8,3:18:27.09:492,27,0	1/1:0,0:16:21.44:133,21,0	1/1:2,0:9:8.77:51,9,0	1/1:7,0:28:49.53:341,50,0	0/0:14,0:15:32.99:0,33,432	1/1:9,0:23:33.59:206,34,0	1/1:3,0:9:12.90:122,13,0	0/0:10,0:11:26.33:0,26,349	0/0:11,0:11:33.11:0,33,450	1/1:3,0:10:20.44:144,20,0	1/1:6,0:15:29.17:173,29,0	0/1:2,0:9:23.25:68,0,23	1/1:5,0:22:35.98:207,36,0	1/1:7,5:16:30.09:520,30,0	1/1:14,9:24:42.12:800,42,0	1/1:9,10:21:45.02:844,45,0	1/1:4,3:7:6.91:141,7,0	0/0:6,0:6:11.99:0,12,163	0/0:5,0:5:12.02:0,12,164	0/0:8,0:10:30.07:0,30,374	1/1:10,12:25:31.66:610,32,0	1/1:8,8:21:42.09:790,42,0	1/1:12,14:33:59.01:1205,59,0	1/1:3,9:17:26.30:530,26,0
chr10	76428819	.	GTTC	G	9111.33	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=3.906;DP=656;FS=3.702;HRun=0;HaplotypeScore=105.1360;InbreedingCoeff=0.9995;MQ=71.03;MQ0=0;MQRankSum=-2.985;QD=39.10;ReadPosRankSum=1.521;VQSLOD=5.5743;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,129,2710	1/1:1,12:13:33.11:515,33,0	0/0:21,0:21:51.13:0,51,970	0/0:17,0:17:44.14:0,44,871	0/0:26,0:26:75.25:0,75,1561	1/1:2,23:25:63.21:986,63,0	1/1:0,31:31:75.26:1173,75,0	1/1:2,27:29:81.26:1243,81,0	0/0:22,0:22:63.22:0,63,1364	1/1:1,20:21:60.20:929,60,0	1/1:2,15:17:42.14:655,42,0	0/0:30,0:30:72.21:0,72,1440	0/0:20,0:20:57.20:0,57,1214	1/1:0,13:13:27.09:422,27,0	1/1:1,27:28:69.23:1078,69,0	1/1:1,25:25:60.20:939,60,0	1/1:2,28:30:75.26:1173,75,0	0/0:10,0:10:30.10:0,30,646	0/0:20,0:20:57.19:0,57,1174	0/0:18,0:18:51.17:0,51,1076	0/0:36,0:36:99:0,105,2233	0/0:20,0:20:51.18:0,51,1093	0/0:20,0:20:54.12:0,54,1099	0/0:25,0:25:63.20:0,63,1323	0/0:19,0:19:57.18:0,57,1194	0/0:28,1:29:25.30:0,25,1435	0/0:26,0:26:72.22:0,72,1459	0/0:13,0:13:39.09:0,39,720
chr10	76430085	.	T	TGAGA	3153.51	PASS	AB=0.795;AC=16;AF=0.286;AN=56;BaseQRankSum=1.521;DP=667;FS=9.425;HRun=0;HaplotypeScore=183.2929;InbreedingCoeff=0.4551;MQ=53.83;MQ0=20;MQRankSum=0.365;QD=14.40;ReadPosRankSum=1.436;VQSLOD=2.7660;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:99:125,0,143	0/1:3,8:14:0.79:121,0,1	0/0:27,0:8:14.55:0,15,271	0/0:32,0:13:21.62:0,22,320	0/0:19,0:19:48.14:0,48,665	1/1:8,3:13:24.03:343,24,0	0/1:5,10:19:21.51:85,0,22	0/1:22,0:22:76.31:83,0,76	0/0:25,0:25:54.03:0,54,679	1/1:15,3:18:17.60:464,18,0	1/1:3,1:16:6.38:77,6,0	0/0:26,0:27:45.23:0,45,1030	0/0:21,0:21:63.12:0,63,930	0/1:13,2:16:21.16:156,0,21	0/1:23,5:31:39.09:534,0,39	1/1:17,4:22:1.58:589,2,0	1/1:12,6:19:39.16:755,39,0	0/0:25,0:24:66.65:0,67,1032	0/0:20,0:19:51.08:0,51,626	0/0:30,0:30:66.11:0,66,1000	0/0:25,0:23:17.85:0,18,254	0/0:33,0:33:93.26:0,93,1467	0/0:28,0:28:72.21:0,72,1176	0/0:36,0:36:81.16:0,81,1491	0/0:15,0:13:35.99:0,36,459	0/0:33,0:32:87.16:0,87,1192	0/0:24,0:22:67.46:0,67,966	0/0:26,0:24:60.67:0,61,875
chr10	76430087	.	TGA	T	1993.26	PASS	AB=0.977;AC=21;AF=0.375;AN=56;BaseQRankSum=5.450;DP=666;FS=6.443;HRun=0;HaplotypeScore=163.6306;InbreedingCoeff=0.6905;MQ=52.72;MQ0=21;MQRankSum=-0.317;QD=6.54;ReadPosRankSum=1.897;VQSLOD=3.0648;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:43.94:44,0,44	0/0:14,0:14:9.84:0,10,58	0/0:28,0:9:8.91:0,9,65	0/0:33,0:11:2.84:0,3,14	1/1:11,7:19:20.77:189,21,0	0/0:12,0:14:30.01:0,30,228	0/0:15,0:15:17.05:0,17,157	0/0:20,0:20:33.24:0,33,326	0/0:11,0:25:42.01:0,42,425	0/0:21,0:21:40.56:0,41,352	0/0:17,0:17:3.47:0,3,27	0/1:25,2:27:20.23:20,0,438	0/0:21,0:21:18.04:0,18,239	0/0:16,0:16:18.01:0,18,191	0/0:30,0:30:40.67:0,41,414	0/0:23,0:23:41.56:0,42,337	0/0:17,0:19:35.98:0,36,312	1/1:12,13:24:47.78:458,48,0	1/1:15,4:18:11.74:99,12,0	1/1:19,9:30:33.67:305,34,0	1/1:23,2:23:5.11:54,5,0	0/1:33,0:33:5.27:5,0,455	0/0:25,4:29:10.25:0,10,479	0/0:35,1:36:21.49:0,21,755	1/1:9,5:13:14.83:138,15,0	1/1:24,7:30:34.30:279,34,0	1/1:16,7:22:32.44:262,32,0	1/1:15,10:23:35.67:343,36,0
chr10	76430113	.	AGTT	A	1855.62	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=9.975;DP=650;FS=5.888;HRun=0;HaplotypeScore=189.8265;InbreedingCoeff=0.8937;MQ=65.25;MQ0=17;MQRankSum=-4.812;QD=10.98;ReadPosRankSum=2.747;VQSLOD=3.1244;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:47.87:0,48,655	0/0:12,0:12:11.49:0,11,249	0/0:44,0:26:72.11:0,72,1530	0/0:44,0:24:68.10:0,68,1268	1/1:18,0:18:10.61:138,11,0	0/0:20,0:20:45.26:0,45,876	0/0:19,0:19:39.11:0,39,780	0/0:31,0:31:86.14:0,86,1645	0/0:28,0:28:60.21:0,60,1234	0/0:24,0:24:66.53:0,67,1237	0/0:18,0:18:27.56:0,28,456	0/0:30,0:30:78.13:0,78,1726	0/0:12,0:11:33.11:0,33,741	0/0:16,0:16:29.87:0,30,561	0/0:34,0:34:72.02:0,72,1363	0/0:24,0:24:46.62:0,47,942	0/0:19,0:19:48.15:0,48,856	1/1:22,0:21:45.82:370,46,0	0/1:20,0:18:40.43:106,0,40	1/1:20,6:27:47.25:349,47,0	1/1:15,0:14:12.92:104,13,0	0/0:24,0:24:69.24:0,69,1550	0/0:23,0:23:57.19:0,57,1334	0/0:33,0:33:91.95:0,92,1957	1/1:18,0:17:17.93:164,18,0	1/1:18,0:17:43.02:339,43,0	1/1:16,1:16:38.15:331,38,0	1/1:12,0:10:13.90:161,14,0
chr10	76430116	.	T	TA	5226.04	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=6.916;DP=644;FS=14.310;HRun=1;HaplotypeScore=162.2573;InbreedingCoeff=0.9969;MQ=67.03;MQ0=17;MQRankSum=-7.102;QD=29.20;ReadPosRankSum=-0.174;VQSLOD=2.8533;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:38.80:0,39,397	0/0:12,0:12:14.84:0,15,157	0/0:46,0:29:77.89:0,78,949	0/0:44,0:24:66.21:0,66,778	1/1:0,18:18:38.99:459,39,0	0/0:19,0:19:47.84:0,48,509	0/0:18,0:18:39.09:0,39,473	0/0:27,0:27:75.01:0,75,918	0/0:27,0:27:57.13:0,57,703	0/0:22,0:22:60.15:0,60,742	0/0:18,0:18:29.50:0,30,292	0/0:29,0:29:72.23:0,72,932	0/0:14,0:13:39.09:0,39,468	0/0:15,0:15:26.97:0,27,307	0/0:31,0:31:73.99:0,74,790	0/0:22,0:22:52.44:0,52,555	0/0:17,0:17:45.06:0,45,508	1/1:1,21:22:60.13:846,60,0	1/1:3,17:18:42.13:588,42,0	1/1:10,18:28:60.04:761,60,0	1/1:6,13:16:32.17:355,32,0	0/0:24,0:24:69.22:0,69,893	0/0:23,0:23:60.18:0,60,761	0/0:32,0:32:89.94:0,90,1083	1/1:2,18:19:43.76:520,44,0	1/1:3,15:19:52.93:686,53,0	1/1:5,14:18:48.98:639,49,0	1/1:2,10:10:27.09:372,27,0
chr10	76430151	.	A	ATGTG	6982.63	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-0.873;DP=622;FS=9.869;HRun=0;HaplotypeScore=190.5725;InbreedingCoeff=0.9616;MQ=60.57;MQ0=10;MQRankSum=-5.772;QD=37.74;ReadPosRankSum=-2.228;VQSLOD=3.9335;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:35.48:0,35,538	0/0:10,0:10:8.97:0,9,109	0/0:28,0:16:14.88:0,15,179	0/0:36,0:24:9.50:0,9,144	1/1:7,6:14:24.07:508,24,0	0/0:19,0:19:42.14:0,42,693	0/0:20,0:20:27.09:0,27,434	0/0:31,0:31:45.15:0,45,726	0/0:18,0:18:36.12:0,36,596	0/0:18,0:19:42.09:0,42,618	0/0:20,0:20:28.68:0,29,444	0/0:26,0:27:47.10:0,47,954	0/0:17,0:17:42.14:0,42,694	0/0:12,0:12:18.06:0,18,298	0/0:26,0:27:66.22:0,66,1070	0/0:20,0:20:36.12:0,36,592	0/0:19,0:18:39.12:0,39,636	1/1:19,7:25:42.08:808,42,0	1/1:14,5:18:36.04:704,36,0	1/1:11,14:25:45.15:1061,45,0	1/1:21,7:26:30.06:534,30,0	0/0:26,0:26:54.18:0,54,885	0/0:29,0:29:54.18:0,54,870	0/0:26,0:27:42.08:0,42,619	1/1:6,15:22:54.19:1238,54,0	1/1:6,14:20:45.15:1064,45,0	1/1:6,14:20:39.07:955,39,0	1/1:7,1:7:6.02:111,6,0
chr10	76430170	.	TGAAAGAGAGAGA	T	259.10	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.293;DP=576;FS=2.820;HRun=0;HaplotypeScore=254.7934;InbreedingCoeff=0.8800;MQ=56.81;MQ0=14;MQRankSum=-2.869;QD=8.93;ReadPosRankSum=-2.220;VQSLOD=2.4195;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,20:29:19.91:351,20,0	0/0:10,0:10:13.76:0,14,201	0/0:29,0:10:10.62:0,11,465	0/0:24,0:16:24.56:0,25,1405	0/0:16,0:15:21.17:0,21,1071	0/0:17,0:17:45.08:0,45,904	0/0:18,0:18:37.31:0,37,593	0/0:28,0:28:48.15:0,48,1024	0/0:18,0:18:36.12:0,36,1761	0/0:18,0:18:51.17:0,51,1155	0/0:16,0:16:25.34:0,25,375	0/0:27,0:27:63.22:0,63,3480	0/0:19,0:19:51.18:0,51,2804	0/0:16,0:16:30.57:0,31,592	0/0:25,0:25:63.21:0,63,1122	0/0:16,0:16:36.11:0,36,789	0/0:18,0:17:45.14:0,45,1007	0/0:21,0:21:48.12:0,48,2484	0/0:17,0:17:42.14:0,42,1838	0/0:21,0:21:36.04:0,36,1608	0/0:29,0:28:37.30:0,37,2108	0/0:22,0:22:51.17:0,51,2546	0/0:29,0:29:60.18:0,60,2978	0/0:23,0:23:57.11:0,57,2625	0/0:24,0:24:43.82:0,44,2075	0/0:21,0:21:57.19:0,57,2612	0/0:20,0:19:41.78:0,42,1917	0/0:4,0:4:9.03:0,9,513
chr10	76430185	.	AAGAG	A	5668.16	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=3.534;DP=563;FS=11.656;HRun=0;HaplotypeScore=162.6434;InbreedingCoeff=0.8905;MQ=58.45;MQ0=11;MQRankSum=-6.409;QD=27.92;ReadPosRankSum=-1.075;VQSLOD=3.8398;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:24.23:24,0,123	1/1:1,4:5:5.53:138,6,0	0/0:31,0:17:26.42:0,26,709	0/0:28,0:22:32.13:0,32,898	0/0:12,0:11:24.08:0,24,584	1/1:5,12:17:35.87:613,36,0	1/1:1,17:18:38.93:594,39,0	1/1:5,18:23:51.14:856,51,0	0/0:15,0:15:39.13:0,39,876	1/1:5,16:21:53.47:813,53,0	1/1:3,10:13:14.69:249,15,0	0/0:29,0:29:81.02:0,81,1912	0/0:18,0:18:53.21:0,53,1277	1/1:3,14:17:33.03:505,33,0	1/1:10,17:27:34.83:670,35,0	1/1:4,11:15:34.32:558,34,0	1/1:3,18:20:9:647,9,0	0/0:19,0:19:42.14:0,42,1081	0/0:22,0:21:53.76:0,54,1151	0/0:17,0:17:39.13:0,39,941	0/0:28,0:28:48.47:0,48,1236	0/0:24,0:24:60.18:0,60,1312	0/0:24,0:24:63.20:0,63,1477	0/0:26,0:26:63:0,63,1519	0/0:18,0:18:42.09:0,42,977	0/0:26,0:26:71.79:0,72,1589	0/0:18,0:18:38.96:0,39,972	0/0:5,0:5:11.99:0,12,252
chr10	76430211	.	TGC	T	2094.62	PASS	AB=0.968;AC=19;AF=0.339;AN=56;BaseQRankSum=6.525;DP=536;FS=9.630;HRun=0;HaplotypeScore=140.6333;InbreedingCoeff=0.5060;MQ=54.09;MQ0=12;MQRankSum=-4.682;QD=8.35;ReadPosRankSum=-1.530;VQSLOD=2.7132;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:14.61:0,15,100	1/1:5,0:5:8.75:56,9,0	0/1:34,0:19:0.17:0,0,282	0/0:29,0:20:23.05:0,23,290	0/0:11,0:10:18.33:0,18,127	1/1:15,1:16:28.90:233,29,0	0/1:23,3:26:43.17:178,0,43	1/1:17,0:16:47.85:389,48,0	0/0:15,0:15:16.77:0,17,382	1/1:19,0:19:26.24:306,26,0	0/1:13,0:13:1.52:61,0,2	0/0:26,1:27:47.14:0,47,495	0/1:16,0:16:26.59:27,0,254	1/1:18,1:19:4.60:158,5,0	0/1:21,2:23:12.45:291,0,12	0/1:18,0:18:4.96:236,0,5	1/1:22,0:22:45.16:341,45,0	0/0:16,0:16:13.48:0,13,161	0/0:19,0:19:30.66:0,31,314	0/0:13,0:11:21.81:0,22,160	0/0:33,0:30:26.52:0,27,280	0/0:17,0:17:35.89:0,36,320	0/0:18,0:18:19.07:0,19,299	0/0:38,0:37:62.88:0,63,998	0/0:9,0:9:20.91:0,21,161	0/1:22,1:23:6.12:6,0,266	0/0:9,0:9:19.59:0,20,123	0/0:8,0:8:14.17:0,14,68
chr10	76430213	.	CGTGTGTGT	C	1058.94	PASS	AC=18;AF=0.346;AN=52;BaseQRankSum=0.014;DP=549;FS=0.889;HRun=0;HaplotypeScore=191.5177;InbreedingCoeff=0.7441;MQ=52.69;MQ0=12;MQRankSum=-0.608;QD=7.56;ReadPosRankSum=3.265;VQSLOD=2.7135;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:6.91:0,7,61	0/0:5,0:5:3.01:0,3,42	./.	./.	1/1:10,1:10:6:100,6,0	0/0:16,0:16:3.01:0,3,76	0/0:28,0:28:33.58:0,34,909	0/0:22,0:21:13.59:0,14,168	0/0:14,0:14:26.67:0,27,712	0/0:20,0:20:26.98:0,27,351	0/0:12,0:12:11.65:0,12,329	0/0:27,0:28:29.98:0,30,547	0/0:18,0:18:26.96:0,27,414	0/0:19,0:19:14.67:0,15,293	0/0:25,0:25:36.12:0,36,916	0/0:17,0:17:18.05:0,18,384	0/0:23,0:22:17.97:0,18,198	1/1:16,0:16:5.85:76,6,0	1/1:18,1:19:2.32:73,2,0	1/1:11,1:10:6.02:119,6,0	1/1:33,0:30:5.55:127,6,0	0/0:16,0:16:12.01:0,12,160	0/0:18,0:19:21.04:0,21,416	0/0:39,0:38:75.25:0,75,1995	1/1:10,0:10:5.73:93,6,0	1/1:20,1:21:18.06:380,18,0	1/1:8,1:9:3.01:75,3,0	1/1:5,3:9:9.03:187,9,0
chr10	76430702	.	CTTT	C	5280.58	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=0.781;DP=551;FS=18.734;HRun=17;HaplotypeScore=89.2002;InbreedingCoeff=0.7911;MQ=64.53;MQ0=6;MQRankSum=0.465;QD=13.44;ReadPosRankSum=6.547;VQSLOD=1.2495;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:33:60.82:0,61,452	1/1:4,2:7:8.83:79,9,0	0/1:28,0:15:6.16:6,0,93	0/1:23,0:12:5.23:5,0,178	1/1:3,10:15:24.07:271,24,0	1/1:3,9:13:32.87:312,33,0	1/1:6,16:22:47.59:474,48,0	1/1:8,18:27:50.89:528,51,0	0/0:22,0:25:58.03:0,58,856	1/1:13,11:26:29.81:332,30,0	1/1:7,8:15:26.70:249,27,0	0/0:13,1:18:9.66:0,10,442	0/0:11,0:12:30.01:0,30,405	1/1:5,6:12:20.71:202,21,0	1/1:6,9:17:22.31:230,22,0	1/1:4,6:11:19.50:199,20,0	1/1:7,18:26:54.24:541,54,0	1/1:4,9:14:23.70:246,24,0	1/1:14,7:20:14.55:149,15,0	1/1:10,4:14:8.39:92,8,0	1/1:9,7:19:0.75:153,1,0	0/0:17,0:19:36.95:0,37,500	0/0:20,0:24:65.14:0,65,946	0/0:24,1:27:29.01:0,29,830	1/1:5,10:19:21.39:267,21,0	1/1:7,4:11:14.86:152,15,0	1/1:10,18:29:38.67:397,39,0	1/1:2,13:17:36.26:395,36,0
chr10	76431704	.	C	CGTGT	1270.51	PASS	AB=0.885;AC=11;AF=0.196;AN=56;BaseQRankSum=6.844;DP=638;FS=33.049;HRun=0;HaplotypeScore=160.4010;InbreedingCoeff=0.2568;MQ=81.76;MQ0=9;MQRankSum=-3.409;QD=8.09;ReadPosRankSum=-3.446;VQSLOD=0.8296;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:24:44.78:0,45,608	0/0:9,0:9:24.06:0,24,375	0/0:48,0:33:57.68:0,58,1177	0/0:42,0:28:55.17:0,55,951	0/1:15,1:16:16.72:112,0,17	0/0:20,0:19:48.14:0,48,786	0/0:33,0:33:96.26:0,96,1535	0/0:18,0:18:45.63:0,46,677	0/0:26,0:25:75.20:0,75,1273	0/0:24,0:23:60.18:0,60,1052	0/0:16,0:16:18.06:0,18,311	0/0:24,0:23:69.21:0,69,1254	0/0:12,0:12:33:0,33,534	0/0:29,0:29:81.24:0,81,1410	0/0:27,0:29:78.16:0,78,1267	0/0:22,0:22:63.15:0,63,1058	0/0:38,0:38:96.51:0,97,1750	1/1:11,6:17:12.91:451,13,0	0/1:9,0:9:7.12:7,0,36	0/1:14,2:16:10.46:194,0,10	0/1:32,0:33:55.16:59,0,55	0/0:15,0:15:45.12:0,45,759	0/0:24,0:24:59.18:0,59,945	0/0:25,0:25:72.23:0,72,1317	0/1:4,3:17:12.39:255,0,12	0/1:25,1:26:80.46:80,0,117	0/1:11,1:13:1.10:198,0,1	1/1:10,0:10:3.61:65,4,0
chr10	76431707	.	GTC	G	4828	PASS	AB=0.946;AC=23;AF=0.411;AN=56;BaseQRankSum=-5.147;DP=699;FS=0.647;HRun=0;HaplotypeScore=126.6094;InbreedingCoeff=-0.1131;MQ=74.95;MQ0=9;MQRankSum=-0.812;QD=10.87;ReadPosRankSum=-1.695;VQSLOD=4.0035;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:40.87:0,41,367	0/1:11,0:11:68.65:69,0,72	0/0:44,0:29:57.89:0,58,574	0/0:39,0:25:46.96:0,47,468	1/1:16,0:16:2.05:180,2,0	0/1:21,1:21:30.42:305,0,30	0/1:34,3:37:35.87:546,0,36	1/1:18,0:18:42.48:375,42,0	0/0:26,0:25:72.05:0,72,988	0/1:25,0:24:20.61:402,0,21	0/1:5,12:17:54.77:55,0,60	0/0:26,0:25:55.28:0,55,959	0/0:13,0:13:35.44:0,35,374	0/1:25,2:27:99:298,0,129	0/1:29,1:30:99:311,0,165	0/1:23,3:26:99:395,0,104	0/1:34,2:37:99:428,0,208	1/1:21,0:21:10.20:192,10,0	0/1:12,0:11:5.80:141,0,6	0/1:24,0:24:30.73:158,0,31	0/1:34,0:34:4.61:378,0,5	0/0:17,0:17:50.87:0,51,628	0/0:28,0:28:34.10:0,34,772	0/0:27,0:27:81.04:0,81,1171	0/1:19,0:19:27.32:27,0,31	0/1:35,0:35:99:310,0,129	0/1:20,0:20:53.23:103,0,53	1/1:13,0:13:10.75:157,11,0
chr10	76432186	.	TCAACAA	T	4733.11	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=3.957;DP=620;FS=34.531;HRun=0;HaplotypeScore=137.2140;InbreedingCoeff=0.9931;MQ=60.45;MQ0=4;MQRankSum=-9.716;QD=26.59;ReadPosRankSum=-0.752;VQSLOD=2.8338;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,117,3573	1/1:1,11:12:21.07:448,21,0	0/0:20,0:14:35.96:0,36,824	0/0:26,0:23:45.15:0,45,1247	0/0:15,0:15:36.12:0,36,914	1/1:2,14:16:18.06:382,18,0	1/1:4,12:16:21.07:457,21,0	1/1:5,11:16:23.76:219,24,0	0/0:27,0:27:66.20:0,66,1746	1/1:4,14:18:39.12:702,39,0	1/1:1,18:19:30.10:639,30,0	0/0:30,0:30:75.23:0,75,2085	0/0:25,0:25:69.24:0,69,2008	1/1:4,13:17:18.06:393,18,0	1/1:3,18:21:27.09:589,27,0	1/1:2,18:20:21.07:458,21,0	1/1:8,15:23:19.89:445,20,0	0/0:28,0:28:66.23:0,66,1975	0/0:17,0:16:30.10:0,30,803	0/0:17,0:17:48.16:0,48,1485	0/0:43,0:43:99:0,117,3280	0/0:21,0:21:48.16:0,48,1457	0/0:16,0:16:45.15:0,45,1325	0/0:47,0:47:99:0,132,3898	0/0:14,0:14:39.10:0,39,1031	0/0:18,0:17:51.17:0,51,1434	0/0:24,0:24:60.10:0,60,1668	0/0:11,0:11:18.06:0,18,604
chr10	76432328	.	G	GTGAGACCCTA	44411.59	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=0.284;DP=524;FS=20.501;HRun=0;HaplotypeScore=164.5652;InbreedingCoeff=0.9939;MQ=53.78;MQ0=1;MQRankSum=-15.905;QD=121.68;ReadPosRankSum=0.008;VQSLOD=4.1547;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,10:26:60.21:2734,60,0	1/1:2,9:12:33.11:1767,33,0	0/0:25,0:25:50.94:0,51,1712	0/0:16,0:12:30.10:0,30,898	1/1:7,15:24:48.16:2533,48,0	1/1:9,6:15:36.12:1721,36,0	1/1:6,11:17:48.15:2299,48,0	1/1:14,11:24:69.24:3286,69,0	0/0:18,0:18:48.16:0,48,1627	1/1:15,13:28:75.25:3583,75,0	1/1:6,15:21:54.17:2664,54,0	0/0:26,0:26:78.27:0,78,2635	0/0:14,0:14:42.14:0,42,1416	1/1:14,5:19:51.10:2048,51,0	1/1:11,5:16:42.14:1849,42,0	1/1:4,10:14:42.14:2172,42,0	1/1:7,4:11:30.10:1375,30,0	1/1:7,7:14:33.56:1496,34,0	1/1:4,5:7:21.07:1128,21,0	1/1:7,12:19:42.14:2199,42,0	1/1:6,3:9:12.04:645,12,0	0/0:18,0:18:51.17:0,51,1595	0/0:21,0:21:57.20:0,57,1876	0/0:21,0:21:63.22:0,63,2036	1/1:8,14:23:51.18:2469,51,0	1/1:8,9:16:48.16:2350,48,0	1/1:13,16:29:84.29:3903,84,0	1/1:5,10:15:42.14:2191,42,0
chr10	76432329	.	T	TGAGA	11980.63	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=13.214;DP=414;FS=15.190;HRun=0;HaplotypeScore=169.2619;InbreedingCoeff=0.7515;MQ=56.74;MQ0=1;MQRankSum=-14.612;QD=45.55;ReadPosRankSum=3.606;VQSLOD=4.7831;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,4:18:41.71:916,42,0	1/1:9,0:9:27.09:486,27,0	0/0:21,0:21:62.42:0,62,1186	0/0:13,0:10:30.09:0,30,587	1/1:20,0:20:49.34:796,49,0	1/1:6,0:6:18.06:417,18,0	1/1:13,0:13:39.12:688,39,0	0/1:20,0:19:39.65:724,0,40	0/0:17,0:17:51.16:0,51,1030	1/1:19,0:19:29.72:901,30,0	1/1:18,0:17:51.16:985,51,0	0/0:26,0:26:78.27:0,78,1635	0/0:14,0:14:42.14:0,42,880	1/1:5,0:5:15.05:291,15,0	1/1:5,0:5:15.05:259,15,0	1/1:10,0:10:30.10:606,30,0	1/1:9,0:10:27.09:509,27,0	0/1:13,0:13:15.18:423,0,15	1/1:7,0:7:18.06:311,18,0	1/1:14,0:14:33.11:570,33,0	1/1:5,0:5:12.04:218,12,0	0/0:18,0:18:51.17:0,51,1037	0/0:20,0:20:57.18:0,57,1157	0/0:21,0:21:63.22:0,63,1305	0/1:21,0:21:37.73:627,0,38	1/1:10,0:10:30.10:518,30,0	1/1:25,0:25:46.67:1064,47,0	1/1:14,0:14:39.13:669,39,0
chr10	76432352	.	CAAAAAACA	C	4074.57	PASS	AB=0.991;AC=24;AF=0.429;AN=56;BaseQRankSum=4.527;DP=526;FS=34.703;HRun=0;HaplotypeScore=232.2758;InbreedingCoeff=0.7154;MQ=42.15;MQ0=2;MQRankSum=-8.888;QD=17.27;ReadPosRankSum=-4.973;VQSLOD=0.4401;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:27:14.25:0,14,544	1/1:9,1:10:12.03:163,12,0	0/0:31,0:15:13.42:0,13,347	0/1:34,0:11:1.23:1,0,119	0/0:27,0:27:22.61:0,23,521	1/1:7,4:11:30.08:471,30,0	1/1:14,0:14:30.04:310,30,0	1/1:24,0:22:34.37:392,34,0	0/0:16,0:16:45.15:0,45,1464	1/1:18,7:25:58.81:954,59,0	1/1:15,6:20:48.13:689,48,0	0/0:24,0:24:63.22:0,63,2189	0/0:11,0:11:30.10:0,30,739	1/1:9,1:10:21.05:221,21,0	1/1:7,0:7:9.02:92,9,0	1/1:9,3:12:18.05:336,18,0	1/1:12,2:14:27.07:361,27,0	0/0:14,0:14:11.18:0,11,280	0/1:20,0:19:10.12:10,0,635	0/0:19,0:19:33.47:0,33,814	0/1:6,0:6:34.97:35,0,85	0/0:14,0:14:36.12:0,36,1190	0/0:18,0:18:42.14:0,42,1561	0/0:22,0:22:57.17:0,57,1701	0/0:23,0:23:41.24:0,41,1424	0/1:25,1:25:38.41:38,0,620	0/0:28,0:27:25.54:0,26,1023	0/0:16,0:16:13.73:0,14,772
chr10	76432359	.	C	CAAA	7633.16	PASS	AB=0.962;AC=21;AF=0.375;AN=56;BaseQRankSum=6.075;DP=540;FS=0.000;HRun=7;HaplotypeScore=171.4671;InbreedingCoeff=0.5998;MQ=41.49;MQ0=3;MQRankSum=-7.058;QD=26.97;ReadPosRankSum=-2.006;VQSLOD=1.2565;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:59.36:0,59,714	0/0:5,0:8:11.75:0,12,71	0/0:39,0:11:6.60:0,7,184	0/1:39,0:11:8.31:8,0,91	1/1:15,10:26:48.63:865,49,0	0/0:6,0:12:3.36:0,3,110	0/0:5,0:12:0.78:0,1,99	0/0:12,0:22:7.31:0,7,131	0/0:18,0:18:46.55:0,47,623	0/1:14,0:25:16.73:17,0,165	0/1:13,0:22:2.35:2,0,144	0/0:22,0:22:63.21:0,63,850	0/0:12,0:12:33.11:0,33,448	0/0:4,0:9:17.09:0,17,102	0/0:3,0:6:8.82:0,9,53	0/1:6,0:9:3.66:4,0,66	0/0:6,0:15:13.65:0,14,128	1/1:10,2:13:26.99:393,27,0	1/1:17,7:22:47.98:760,48,0	1/1:11,8:19:42.13:760,42,0	0/1:5,1:6:5.79:140,0,6	0/0:13,0:13:39.12:0,39,515	0/0:16,0:16:45.15:0,45,612	0/0:25,0:25:63.16:0,63,808	1/1:10,16:27:78.14:1393,78,0	1/1:20,9:29:69.27:1319,69,0	1/1:17,9:25:69.70:1282,70,0	1/1:7,8:15:39.06:690,39,0
chr10	76432383	.	CA	C	4375.39	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=4.075;DP=597;FS=5.722;HRun=8;HaplotypeScore=147.7275;InbreedingCoeff=0.9842;MQ=56.12;MQ0=6;MQRankSum=-3.391;QD=22.55;ReadPosRankSum=1.928;VQSLOD=3.3075;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.16:0,66,772	0/0:0,0:4:11.47:0,11,58	0/0:49,0:17:31.09:0,31,257	0/0:51,0:19:26.71:0,27,246	1/1:7,17:23:45.95:436,46,0	0/0:4,0:17:40.93:0,41,229	0/0:2,0:16:34.56:0,35,180	0/0:11,0:23:54.96:0,55,305	0/0:21,0:21:57.16:0,57,675	0/0:6,0:36:81.17:0,81,403	0/0:2,0:27:64.99:0,65,330	0/0:18,0:18:45.14:0,45,543	0/0:9,0:9:27.08:0,27,324	0/0:1,0:12:34.64:0,35,197	0/0:0,0:9:23.05:0,23,119	0/0:3,0:11:28.67:0,29,150	0/0:1,0:18:45.93:0,46,232	1/1:2,11:13:30.04:290,30,0	1/1:7,16:22:44.58:458,45,0	1/1:2,21:23:60.08:576,60,0	1/1:3,4:7:8.96:86,9,0	0/0:14,0:14:36.57:0,37,424	0/0:20,0:20:54.15:0,54,640	0/0:22,0:22:60.18:0,60,720	1/1:4,28:32:72.11:694,72,0	1/1:4,28:32:70.04:767,70,0	1/1:1,24:25:72.11:693,72,0	1/1:0,14:14:39.06:376,39,0
chr10	76433368	.	A	AAAC	17612.96	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-7.862;DP=589;FS=6.061;HRun=0;HaplotypeScore=79.8294;InbreedingCoeff=0.9940;MQ=66.61;MQ0=0;MQRankSum=-4.624;QD=46.47;ReadPosRankSum=1.323;VQSLOD=6.3953;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:84.27:0,84,1245	1/1:2,4:8:12.04:253,12,0	0/0:26,0:24:25.44:0,25,663	0/0:21,0:19:30.75:0,31,498	1/1:2,10:13:33.11:694,33,0	1/1:6,19:26:60.21:1235,60,0	1/1:12,18:30:37.56:810,38,0	1/1:9,18:27:57.16:1080,57,0	0/0:21,0:21:57.19:0,57,858	1/1:4,19:23:60.21:1210,60,0	1/1:5,20:25:57.20:1194,57,0	0/0:23,0:23:63.21:0,63,947	0/0:17,0:17:45.15:0,45,676	1/1:4,10:14:24.08:495,24,0	1/1:3,21:25:57.19:1149,57,0	1/1:0,14:14:39.13:821,39,0	1/1:3,16:20:45.15:936,45,0	1/1:3,20:23:57.20:1200,57,0	1/1:4,13:18:48.15:948,48,0	1/1:1,13:14:36.12:733,36,0	1/1:3,17:20:42.14:884,42,0	0/0:13,0:13:36.11:0,36,522	0/0:15,0:15:23.14:0,23,526	0/0:38,0:38:96.24:0,96,1389	1/1:1,14:15:36.12:732,36,0	1/1:4,22:26:69.24:1373,69,0	1/1:7,19:26:54.18:1112,54,0	1/1:1,11:12:36.12:753,36,0
chr10	76433788	.	C	CACCCAGTGGGTCTGTT	75690.17	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-1.420;DP=726;FS=2.087;HRun=0;HaplotypeScore=289.6119;InbreedingCoeff=0.9986;MQ=79.30;MQ0=0;MQRankSum=-19.476;QD=155.74;ReadPosRankSum=-0.586;VQSLOD=4.6530;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,5484	1/1:6,1:8:18.06:1086,18,0	0/0:28,0:28:69.73:0,70,2192	0/0:24,0:24:60.18:0,60,1900	1/1:15,17:38:71.30:3419,71,0	1/1:10,5:19:45.15:3070,45,0	1/1:21,9:31:87.30:5704,87,0	1/1:30,0:30:84.28:4801,84,0	0/0:20,0:20:60.19:0,60,2689	1/1:24,12:41:99:7784,117,0	1/1:16,10:28:56.96:3118,57,0	0/0:24,0:24:66.21:0,66,2513	0/0:23,0:23:69.24:0,69,2987	1/1:13,15:30:87.30:5999,87,0	1/1:19,16:36:99:6553,105,0	1/1:11,13:25:69.20:4544,69,0	1/1:12,7:20:48.08:3009,48,0	1/1:10,7:22:48.16:3380,48,0	1/1:14,5:24:54.17:2794,54,0	1/1:11,8:20:51.09:2678,51,0	1/1:9,8:23:45.07:2397,45,0	0/0:29,0:29:78.11:0,78,3233	0/0:17,0:17:42.14:0,42,1750	0/0:31,0:31:90.30:0,90,3760	1/1:5,5:13:30.06:1753,30,0	1/1:19,13:39:99:6852,114,0	1/1:16,6:25:72.16:4119,72,0	1/1:9,3:13:39.10:2633,39,0
chr10	76434165	.	TTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	T	4929.41	PASS	AB=0.773;AC=16;AF=0.286;AN=56;BaseQRankSum=4.646;DP=711;FS=0.000;HRun=0;HaplotypeScore=546.4213;InbreedingCoeff=0.7174;MQ=58.82;MQ0=19;MQRankSum=-2.886;QD=27.39;ReadPosRankSum=-1.478;VQSLOD=0.8789;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:46:53.92:0,54,3459	0/0:9,0:9:12.82:0,13,1875	0/0:28,0:18:26.76:0,27,644	0/0:30,0:22:23.37:0,23,723	1/1:13,8:19:23.92:789,24,0	0/0:17,0:17:33.11:0,33,3106	0/0:35,0:35:73.49:0,73,6431	0/0:32,0:30:59.74:0,60,3121	0/0:27,0:27:45.71:0,46,4305	0/0:35,0:35:84.27:0,84,8010	0/0:15,0:16:33.11:0,33,3735	0/0:30,0:30:51.57:0,52,3982	0/0:26,0:26:60.15:0,60,5761	0/0:22,0:20:42.77:0,43,5288	0/0:24,0:30:36.69:0,37,4167	0/0:32,0:31:66.68:0,67,7015	0/0:36,0:36:78.11:0,78,7419	1/1:21,0:19:4.56:47,5,0	1/1:23,1:24:8.54:394,9,0	1/1:9,9:17:17.94:882,18,0	0/1:26,9:33:99:275,0,287	0/0:26,0:26:54.26:0,54,6024	0/0:12,0:12:27.86:0,28,3521	0/0:41,0:40:80.83:0,81,8385	1/1:7,7:14:3.01:274,3,0	0/1:18,9:27:99:899,0,432	1/1:7,6:13:6.02:548,6,0	1/1:3,4:7:9.03:822,9,0
chr10	76434381	.	GAGAGACAGAGAGAGAC	G	6633.26	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.116;DP=661;FS=12.123;HRun=0;HaplotypeScore=271.4749;InbreedingCoeff=0.9509;MQ=69.09;MQ0=1;MQRankSum=-9.908;QD=39.72;ReadPosRankSum=1.441;VQSLOD=2.7607;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,108,6995	0/0:10,0:10:27.09:0,27,1673	0/0:34,0:27:47.14:0,47,1502	0/0:44,0:39:42.57:0,43,2196	1/1:2,16:18:12.04:513,12,0	0/0:15,0:15:42.13:0,42,2465	0/0:31,0:31:66.21:0,66,3961	0/0:24,0:24:48.14:0,48,2007	0/0:27,0:27:69.22:0,69,4337	0/0:27,0:27:69.23:0,69,3836	0/0:16,0:16:26.97:0,27,1417	0/0:11,0:11:33.11:0,33,2251	0/0:19,0:19:54.16:0,54,3118	0/0:29,0:29:75.23:0,75,4826	0/0:23,0:22:66.23:0,66,4338	0/0:19,0:19:51.09:0,51,2585	0/0:40,0:40:99:0,108,6810	1/1:3,8:11:6.02:194,6,0	1/1:7,16:23:47.10:1204,47,0	1/1:4,17:21:24.08:1006,24,0	1/1:9,25:34:6.02:165,6,0	0/0:24,0:24:60.18:0,60,3299	0/0:26,0:26:56.06:0,56,2346	0/0:26,0:26:63.20:0,63,3873	1/1:2,16:18:29.70:1353,30,0	1/1:5,12:17:28.29:840,28,0	1/1:0,16:16:21.07:951,21,0	1/1:1,8:9:9.03:408,9,0
chr10	76436332	.	AC	A	1344.81	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.745;DP=643;FS=18.925;HRun=4;HaplotypeScore=64.3944;InbreedingCoeff=0.9919;MQ=91.86;MQ0=0;MQRankSum=-4.617;QD=29.24;ReadPosRankSum=2.562;VQSLOD=1.9580;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,44:46:99:1440,120,0	0/0:7,0:7:21.07:0,21,294	0/0:28,0:28:72.22:0,72,956	0/0:28,0:28:69.04:0,69,826	0/0:18,0:18:51.13:0,51,691	0/0:16,0:16:48.16:0,48,672	0/0:28,0:28:78.24:0,78,1058	0/0:26,0:26:66.21:0,66,895	0/0:33,0:33:93.30:0,93,1284	0/0:19,0:19:51.17:0,51,714	0/0:14,0:14:42.13:0,42,570	0/0:15,0:15:45.14:0,45,614	0/0:20,0:20:60.20:0,60,836	0/0:22,0:22:63.21:0,63,880	0/0:25,0:25:75.25:0,75,1050	0/0:25,0:25:72.22:0,72,975	0/0:38,0:38:99:0,108,1423	0/0:29,0:29:84.25:0,84,1136	0/0:17,0:17:42.13:0,42,566	0/0:15,0:15:42.13:0,42,570	0/0:28,0:28:84.25:0,84,1141	0/0:23,0:23:69.22:0,69,949	0/0:18,0:18:51.17:0,51,714	0/0:33,0:33:96.30:0,96,1325	0/0:18,0:18:54.18:0,54,755	0/0:20,0:20:57.18:0,57,783	0/0:27,0:27:81.27:0,81,1133	0/0:7,0:7:21.07:0,21,293
chr10	76437790	.	GA	G	5177.18	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=9.778;DP=631;FS=3.314;HRun=8;HaplotypeScore=66.8010;InbreedingCoeff=0.9988;MQ=82.74;MQ0=0;MQRankSum=-2.482;QD=25.38;ReadPosRankSum=2.544;VQSLOD=5.8311;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:53:99:0,135,699	0/0:12,0:12:36.11:0,36,435	0/0:21,1:22:19.07:0,19,490	0/0:14,0:14:42.09:0,42,475	1/1:2,17:19:39.05:376,39,0	0/0:27,0:27:75.23:0,75,906	0/0:22,0:22:60.18:0,60,725	0/0:29,0:29:75.21:0,75,885	0/0:17,0:17:48.15:0,48,580	0/0:19,0:19:51.12:0,51,593	0/0:15,0:15:30.09:0,30,362	0/0:10,0:10:30.09:0,30,362	0/0:21,0:21:57.17:0,57,688	0/0:20,0:20:60.18:0,60,725	0/0:21,0:21:57.16:0,57,677	0/0:24,0:24:60.18:0,60,725	0/0:25,0:25:75.22:0,75,894	1/1:1,19:20:57.09:550,57,0	1/1:4,17:21:51.08:493,51,0	1/1:4,19:23:57.08:549,57,0	1/1:1,14:15:42.07:406,42,0	0/0:25,0:25:66.20:0,66,797	0/0:21,0:21:60.16:0,60,700	0/0:30,0:30:78.20:0,78,926	1/1:1,24:25:72.12:695,72,0	1/1:2,26:28:44.88:717,45,0	1/1:1,33:34:96.15:927,96,0	1/1:0,19:19:48.08:464,48,0
chr10	76438042	.	C	CG	147.61	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=4.473;DP=410;FS=3.083;HRun=0;HaplotypeScore=56.5482;InbreedingCoeff=0.7001;MQ=54.60;MQ0=13;MQRankSum=-1.876;QD=5.27;ReadPosRankSum=-1.571;VQSLOD=2.9767;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:18:19.30:238,19,0	0/0:10,0:10:24.06:0,24,314	0/1:8,0:2:0.51:1,0,29	0/0:5,0:3:0.62:0,1,2	0/0:10,0:10:26.61:0,27,319	0/0:15,0:15:39.13:0,39,536	0/0:20,0:18:39.05:0,39,500	0/0:24,0:24:69.23:0,69,949	0/0:14,0:13:33.08:0,33,426	0/0:12,0:11:27.08:0,27,357	0/0:9,0:8:21:0,21,202	0/0:14,0:14:27.08:0,27,360	0/0:12,0:12:21.06:0,21,268	0/0:10,0:10:18.05:0,18,232	0/0:18,0:18:45.09:0,45,586	0/0:14,0:13:21.06:0,21,276	0/0:22,0:21:57.12:0,57,733	0/0:20,0:20:42.02:0,42,505	0/0:17,0:17:48.02:0,48,583	0/0:10,0:9:23.74:0,24,288	0/0:20,0:17:16.55:0,17,478	0/0:11,0:11:21.07:0,21,292	0/0:11,0:9:23.84:0,24,293	0/0:23,0:23:51.11:0,51,669	0/0:10,0:10:24.03:0,24,298	0/0:16,0:16:45.12:0,45,570	0/0:23,0:23:57.02:0,57,707	0/0:12,0:11:27.09:0,27,376
chr10	76438054	.	CA	C	1085.66	PASS	AB=0.750;AC=17;AF=0.304;AN=56;BaseQRankSum=2.653;DP=409;FS=0.000;HRun=13;HaplotypeScore=47.3393;InbreedingCoeff=0.3939;MQ=60.01;MQ0=10;MQRankSum=-0.026;QD=6.62;ReadPosRankSum=2.833;VQSLOD=1.6520;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:26.33:0,26,152	0/1:8,1:10:4.08:4,0,104	0/0:11,0:5:5.42:0,5,42	0/1:7,0:5:6.10:6,0,36	0/1:4,6:10:6.30:73,0,6	0/1:14,2:17:23.87:24,0,191	0/0:17,0:17:38.88:0,39,358	0/0:32,0:32:71.96:0,72,658	0/0:15,0:14:35.99:0,36,327	0/0:9,1:11:1.97:0,2,167	0/0:3,0:2:3:0,3,29	0/0:13,0:13:21.03:0,21,204	0/0:11,1:12:8.21:0,8,236	0/0:11,0:11:12.98:0,13,180	0/0:16,1:17:8.13:0,8,235	0/0:14,0:13:29.46:0,29,227	0/0:19,1:19:17.15:0,17,328	0/1:4,18:22:6.46:237,0,6	1/1:8,6:15:22.82:155,23,0	1/1:7,4:11:22.78:149,23,0	1/1:7,13:19:34.68:236,35,0	0/0:11,0:11:17.98:0,18,163	0/0:14,0:12:24.04:0,24,234	0/0:20,1:21:3.06:0,3,325	1/1:4,6:10:11.90:88,12,0	0/1:3,7:11:3.30:133,0,3	0/1:9,7:16:14.45:73,0,14	1/1:6,6:11:11.90:88,12,0
chr10	76438584	.	G	GC	3135.05	PASS	AB=0.944;AC=19;AF=0.339;AN=56;BaseQRankSum=-7.888;DP=439;FS=13.575;HRun=3;HaplotypeScore=104.1120;InbreedingCoeff=0.8993;MQ=88.77;MQ0=1;MQRankSum=0.217;QD=23.93;ReadPosRankSum=-0.469;VQSLOD=2.0620;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:79.33:0,79,410	0/0:3,0:3:6.02:0,6,72	0/0:23,0:25:42.14:0,42,583	0/1:32,0:29:19.78:20,0,409	1/1:1,8:9:24.08:319,24,0	0/0:18,0:18:48.03:0,48,528	0/0:17,0:17:45.13:0,45,527	0/0:20,0:20:54.14:0,54,619	0/0:10,0:10:30.09:0,30,360	0/0:28,0:28:84.21:0,84,987	0/0:11,0:11:24.07:0,24,279	0/0:20,0:20:57.17:0,57,684	0/0:12,0:12:33.10:0,33,396	0/0:21,0:21:48.14:0,48,557	0/0:17,0:17:45.14:0,45,535	0/0:19,0:19:51.15:0,51,601	0/0:16,0:16:36.04:0,36,409	1/1:2,9:11:24.08:336,24,0	1/1:0,15:15:45.13:597,45,0	1/1:0,11:11:30.06:392,30,0	1/1:1,14:14:27.09:362,27,0	0/0:8,0:8:21.06:0,21,252	0/0:8,0:8:21.05:0,21,238	0/0:15,0:15:39.12:0,39,465	1/1:1,6:7:18.06:252,18,0	1/1:1,10:11:30.08:402,30,0	1/1:2,11:13:33.11:462,33,0	1/1:0,5:5:15.05:209,15,0
chr10	76438611	.	GTCCCCCCC	G	9505.63	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=0.255;DP=363;FS=28.118;HRun=0;HaplotypeScore=113.9294;InbreedingCoeff=0.9512;MQ=75.78;MQ0=2;MQRankSum=-10.284;QD=67.90;ReadPosRankSum=7.934;VQSLOD=2.7608;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:66.20:0,66,2159	1/1:0,3:3:6.02:168,6,0	0/0:25,0:21:52.08:0,52,1308	0/0:19,0:15:29.40:0,29,625	0/0:12,0:12:19.36:0,19,751	1/1:0,15:15:39.13:1149,39,0	1/1:0,14:14:30.10:869,30,0	1/1:0,18:18:53.34:1347,53,0	0/0:11,0:11:24.08:0,24,970	1/1:0,19:19:57.13:1369,57,0	1/1:0,5:5:9.03:230,9,0	0/0:19,0:19:57.16:0,57,1722	0/0:12,0:12:30.06:0,30,937	1/1:0,20:20:42.14:1213,42,0	1/1:0,18:18:45.15:1305,45,0	1/1:0,11:11:27.09:793,27,0	1/1:0,17:17:36.59:1063,37,0	0/0:11,0:11:33.11:0,33,1239	0/0:7,0:7:21.07:0,21,696	0/0:7,0:7:15:0,15,525	0/0:14,0:13:16.60:0,17,321	0/0:5,0:5:15.05:0,15,535	0/0:5,0:5:11.97:0,12,375	0/0:14,0:14:38.14:0,38,1327	0/0:3,0:3:9.03:0,9,319	0/0:10,0:10:27:0,27,684	0/0:15,0:15:27.95:0,28,897	0/0:5,0:5:15.05:0,15,570
chr10	76438612	.	TC	T	583.42	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=8.961;DP=364;FS=12.738;HRun=13;HaplotypeScore=103.6998;InbreedingCoeff=0.6371;MQ=75.69;MQ0=2;MQRankSum=-7.545;QD=2.98;ReadPosRankSum=5.434;VQSLOD=-0.7119;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:40.24:0,40,170	1/1:3,0:3:4.07:12,4,0	0/1:25,0:21:22:22,0,68	0/0:17,0:14:11.62:0,12,76	0/0:12,0:12:5.94:0,6,42	1/1:15,0:15:27.76:85,28,0	1/1:14,0:14:21.29:64,21,0	1/1:18,0:18:31.02:92,31,0	0/0:11,0:11:14.88:0,15,114	1/1:19,0:19:24.22:82,24,0	1/1:5,0:5:4.06:13,4,0	1/1:16,3:19:11.71:86,12,0	0/0:11,0:12:8.98:0,9,72	1/1:20,0:20:27.40:85,27,0	1/1:18,0:18:29.03:90,29,0	1/1:11,0:11:18.88:59,19,0	1/1:17,0:17:25.60:78,26,0	0/1:12,0:12:9.91:10,0,31	0/0:6,0:7:8.97:0,9,73	0/0:7,0:7:2.96:0,3,20	0/0:15,0:14:0:0,0,0	0/0:6,0:6:5.38:0,5,37	0/0:4,1:5:2.99:0,3,24	0/0:12,1:13:14.95:0,15,125	0/0:3,0:3:2.84:0,3,15	0/0:10,0:10:4.25:0,4,32	0/0:14,0:14:14.92:0,15,114	0/0:5,0:5:9.76:0,10,62
chr10	76438614	.	C	CGT	859.96	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.074;DP=366;FS=5.892;HRun=0;HaplotypeScore=113.7075;InbreedingCoeff=0.6857;MQ=77.58;MQ0=2;MQRankSum=1.262;QD=27.74;ReadPosRankSum=1.319;VQSLOD=4.8829;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:31:49.88:955,50,0	0/0:3,0:3:5.91:0,6,39	0/0:27,0:23:38.59:0,39,513	0/0:18,0:14:21.44:0,21,280	0/0:12,0:12:21.06:0,21,293	0/0:15,0:15:36.65:0,37,199	0/0:14,0:14:29.12:0,29,170	0/0:18,0:18:48.88:0,49,318	0/0:11,0:11:24.07:0,24,341	0/0:19,0:19:55.50:0,56,405	0/0:5,0:5:5.83:0,6,33	0/0:18,0:18:54.15:0,54,728	0/0:12,0:12:30.06:0,30,437	0/0:20,0:20:40.84:0,41,244	0/0:18,0:18:31.28:0,31,218	0/0:11,0:11:23.49:0,23,115	0/0:17,0:17:34.80:0,35,192	0/0:12,0:12:36.12:0,36,505	0/0:7,0:7:18.06:0,18,265	0/0:7,0:7:12.04:0,12,172	0/0:16,0:15:9.50:0,10,138	0/0:7,0:7:18.05:0,18,255	0/0:6,0:6:12.04:0,12,168	0/0:12,0:12:32.63:0,33,516	0/0:3,0:3:9.02:0,9,107	0/0:10,0:10:27:0,27,342	0/0:12,0:12:20.38:0,20,310	0/0:5,0:5:13.83:0,14,148
chr10	76438665	.	T	TAGGCCTCCC	7015.20	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-7.543;DP=429;FS=4.183;HRun=0;HaplotypeScore=137.5448;InbreedingCoeff=0.9188;MQ=95.16;MQ0=0;MQRankSum=-6.999;QD=75.43;ReadPosRankSum=-0.088;VQSLOD=4.5253;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.22:0,87,2462	0/0:4,0:4:9.03:0,9,293	0/0:26,0:26:65.92:0,66,1551	0/0:24,0:24:46.92:0,47,1251	1/1:0,6:7:2.83:150,3,0	0/0:18,0:18:54.09:0,54,1429	0/0:19,0:19:51.16:0,51,1589	0/0:20,0:20:57.19:0,57,1686	0/0:13,0:13:39.09:0,39,1081	0/0:14,0:14:36.09:0,36,1097	0/0:7,0:7:15.05:0,15,489	0/0:21,0:21:63.18:0,63,1852	0/0:12,0:12:36.11:0,36,1103	0/0:25,0:25:69.13:0,69,2037	0/0:19,0:19:48.11:0,48,1414	0/0:15,0:15:45.15:0,45,1398	0/0:24,0:24:66.10:0,66,1823	1/1:0,10:14:30.10:1486,30,0	1/1:0,4:9:27.09:978,27,0	1/1:1,8:13:17.98:641,18,0	1/1:0,12:21:18.06:875,18,0	0/0:12,0:12:36.10:0,36,1028	0/0:11,0:11:30.10:0,30,964	0/0:22,0:22:63.22:0,63,1997	1/1:0,4:4:12.04:605,12,0	1/1:0,7:14:39.13:1522,39,0	1/1:0,5:8:12.04:606,12,0	1/1:0,1:3:3.01:151,3,0
chr10	76438959	.	T	TA	1795.98	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=3.701;DP=323;FS=3.298;HRun=0;HaplotypeScore=40.7472;InbreedingCoeff=0.7457;MQ=61.17;MQ0=1;MQRankSum=-9.896;QD=14.97;ReadPosRankSum=-3.413;VQSLOD=3.7547;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,108,1485	1/1:3,0:3:8.80:53,9,0	0/0:18,0:15:44.91:0,45,476	0/0:15,0:12:23.82:0,24,259	1/1:7,0:7:14.70:92,15,0	1/1:5,0:5:14.72:91,15,0	1/1:9,0:9:26.46:160,26,0	1/1:1,12:13:35.59:275,36,0	0/0:18,0:18:51.14:0,51,663	1/1:7,0:7:17.79:120,18,0	1/1:6,0:6:11.69:68,12,0	0/0:18,0:18:50.99:0,51,624	0/0:25,0:25:66.83:0,67,877	1/1:6,0:6:17.73:118,18,0	1/1:6,0:6:17.63:106,18,0	0/1:6,0:6:42.25:54,0,42	1/1:5,0:5:8.88:58,9,0	1/1:4,0:4:8.83:56,9,0	1/1:0,4:4:11.92:100,12,0	1/1:7,0:7:20.59:125,21,0	0/1:6,0:6:5.12:69,0,5	0/0:16,0:16:48.10:0,48,603	0/0:15,0:15:39.52:0,40,488	0/0:35,0:35:99:0,102,1330	1/1:3,0:3:8.89:64,9,0	1/1:8,0:8:23.60:176,24,0	1/1:12,0:12:35.26:215,35,0	0/1:3,0:3:9.02:9,0,33
chr10	76439566	.	C	CTTT	3017.58	PASS	AB=0.571;AC=19;AF=0.339;AN=56;BaseQRankSum=13.106;DP=580;FS=4.491;HRun=10;HaplotypeScore=99.1503;InbreedingCoeff=0.9005;MQ=65.76;MQ0=0;MQRankSum=-0.070;QD=14.04;ReadPosRankSum=-1.654;VQSLOD=1.2216;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,2:47:99:727,100,0	0/0:6,0:7:13.35:0,13,167	0/0:15,0:14:23.87:0,24,256	0/0:16,0:11:6.33:0,6,219	1/1:1,0:18:38.80:291,39,0	0/0:22,0:22:53.81:0,54,597	0/0:27,0:27:72.11:0,72,836	0/0:32,0:32:62.94:0,63,668	0/0:19,0:20:46.42:0,46,564	0/0:29,0:30:66:0,66,722	0/0:16,0:17:39.04:0,39,450	0/0:14,0:15:40.48:0,40,507	0/0:16,0:16:48.13:0,48,572	0/0:22,0:22:51.08:0,51,607	0/0:19,0:19:42.64:0,43,531	0/0:12,0:13:28.39:0,28,362	0/0:29,0:29:78.19:0,78,920	1/1:3,0:26:57.24:403,57,0	1/1:3,1:27:59.23:469,59,0	1/1:2,0:17:40.08:297,40,0	1/1:3,7:16:23.78:273,24,0	0/0:20,0:20:45.11:0,45,544	0/0:18,0:18:45.07:0,45,536	0/0:24,0:27:64.28:0,64,720	1/1:0,0:14:25.12:181,25,0	0/1:5,0:20:26.81:257,0,27	1/1:4,0:18:20.90:157,21,0	1/1:0,0:11:23.87:176,24,0
chr10	76440288	.	GGTGT	G	2729.30	PASS	AB=0.647;AC=19;AF=0.352;AN=54;BaseQRankSum=0.804;DP=590;FS=5.149;HRun=0;HaplotypeScore=120.0484;InbreedingCoeff=0.7553;MQ=57.23;MQ0=4;MQRankSum=3.636;QD=12.52;ReadPosRankSum=-1.555;VQSLOD=2.6858;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:8.71:0,9,140	1/1:8,0:8:8.96:90,9,0	0/0:16,0:7:2.99:0,3,23	0/0:12,0:9:3:0,3,27	./.	0/1:10,11:22:5.43:133,0,5	1/1:19,23:42:26.04:393,26,0	1/1:12,11:23:39.09:402,39,0	0/0:21,0:23:50.57:0,51,743	1/1:10,9:19:27.02:383,27,0	1/1:2,5:7:3.48:49,3,0	0/0:23,0:26:41.58:0,42,668	0/0:13,0:17:29.77:0,30,541	1/1:12,13:26:20.72:314,21,0	1/1:3,8:11:14.72:203,15,0	1/1:6,13:19:18.05:268,18,0	1/1:15,24:41:36.66:690,37,0	0/0:15,0:16:26.97:0,27,370	0/0:24,0:21:22.82:0,23,232	0/0:10,0:10:3:0,3,25	0/0:46,0:46:9.01:0,9,122	0/0:15,0:15:30.07:0,30,551	0/0:14,0:14:24.03:0,24,440	0/0:26,0:27:9.95:0,10,918	0/0:8,0:16:2.59:0,3,25	0/0:26,0:22:9.24:0,9,342	0/0:12,0:12:15.01:0,15,187	0/0:8,0:10:14.94:0,15,200
chr10	76440339	.	GAGTCT	G	2248.37	PASS	AB=0.510;AC=12;AF=0.240;AN=50;BaseQRankSum=8.868;DP=438;FS=14.094;HRun=0;HaplotypeScore=113.9209;InbreedingCoeff=0.8074;MQ=69.44;MQ0=1;MQRankSum=-9.921;QD=31.67;ReadPosRankSum=2.298;VQSLOD=2.8787;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:6.02:79,6,0	0/0:10,0:10:27.09:0,27,798	0/0:9,0:8:19.63:0,20,428	0/0:8,0:8:21.07:0,21,502	./.	0/0:20,0:20:42.14:0,42,1346	0/0:38,0:38:99:0,102,3206	0/0:26,0:26:75.26:0,75,2409	0/0:17,0:17:45.63:0,46,1467	0/0:22,0:22:63.20:0,63,1808	0/0:11,0:11:24.08:0,24,777	0/0:18,0:18:51.18:0,51,1635	0/0:12,0:12:27.09:0,27,893	0/0:17,0:17:42.14:0,42,1312	0/0:18,0:18:54.19:0,54,1750	0/0:18,0:18:48.64:0,49,1504	0/0:39,0:39:96.33:0,96,3007	1/1:0,9:10:24.08:510,24,0	1/1:0,3:3:9.03:196,9,0	./.	0/1:0,12:12:0.39:0,0,1	0/0:13,0:13:36.12:0,36,1104	0/0:12,0:12:36.12:0,36,1086	0/0:34,0:34:90.30:0,90,2910	./.	0/1:1,12:13:60.85:772,0,61	1/1:0,5:6:18.06:381,18,0	1/1:0,9:9:21.07:473,21,0
chr10	76440346	.	AG	A	1316.57	PASS	AC=18;AF=0.333;AN=54;BaseQRankSum=10.016;DP=451;FS=5.594;HRun=4;HaplotypeScore=88.9388;InbreedingCoeff=0.8822;MQ=76.70;MQ0=1;MQRankSum=-9.096;QD=12.54;ReadPosRankSum=0.047;VQSLOD=1.7398;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:21:15.04:172,15,0	0/0:11,0:11:33.11:0,33,461	0/0:13,0:13:5.24:0,5,422	0/0:11,0:11:27.09:0,27,366	./.	0/0:17,0:17:42.14:0,42,588	0/0:34,0:34:90.27:0,90,1238	0/0:30,0:30:81.25:0,81,1090	0/0:15,0:15:39.08:0,39,508	0/0:20,0:20:57.18:0,57,769	0/0:10,0:10:21.07:0,21,294	0/0:18,0:18:51.17:0,51,711	0/0:13,0:13:39.08:0,39,506	0/0:18,0:18:48.16:0,48,672	0/0:17,0:17:51.17:0,51,713	0/0:20,0:20:54.06:0,54,695	0/0:38,0:38:96.30:0,96,1321	1/1:2,12:13:20.80:220,21,0	1/1:0,7:7:18.01:173,18,0	1/1:0,6:6:1.25:3,1,0	1/1:0,13:12:0.45:1,0,0	0/0:12,0:12:33.11:0,33,462	0/0:9,0:9:24.08:0,24,335	0/0:33,0:33:90.77:0,91,1255	1/1:1,12:13:3.01:33,3,0	1/1:1,13:14:16.23:419,16,0	1/1:1,5:6:17.79:184,18,0	1/1:1,9:10:27.04:296,27,0
chr10	76442406	.	G	GT	4649.72	PASS	AB=0.719;AC=19;AF=0.339;AN=56;BaseQRankSum=-13.634;DP=547;FS=5.785;HRun=10;HaplotypeScore=79.3542;InbreedingCoeff=0.6505;MQ=80.52;MQ0=0;MQRankSum=0.126;QD=18.67;ReadPosRankSum=-4.014;VQSLOD=3.9480;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:37:88.99:0,89,681	0/1:3,9:12:13.17:283,0,13	0/1:17,0:18:1.48:1,0,145	0/0:20,0:20:26.23:0,26,233	0/1:9,1:10:11.07:11,0,126	1/1:3,23:27:10.65:494,11,0	0/1:4,17:21:4.17:371,0,4	1/1:12,30:42:92.24:953,92,0	0/0:23,0:23:59.89:0,60,486	1/1:4,19:23:51.08:524,51,0	1/1:1,13:14:32.99:320,33,0	0/0:22,0:22:53.92:0,54,443	0/0:11,0:11:26.96:0,27,221	0/1:3,11:14:19.15:226,0,19	1/1:3,12:15:24.06:256,24,0	1/1:4,20:24:51.09:533,51,0	1/1:3,25:28:44.53:679,45,0	0/0:20,1:21:30.88:0,31,451	0/0:21,1:22:26.05:0,26,370	0/0:13,1:14:9.97:0,10,288	0/0:13,0:13:32.94:0,33,268	0/0:11,0:12:34.98:0,35,273	0/0:14,0:14:32.94:0,33,271	0/0:16,0:16:38.90:0,39,315	0/0:9,0:9:23.97:0,24,197	0/0:28,0:28:74.88:0,75,612	0/0:28,0:28:68.82:0,69,556	0/0:7,0:7:20.96:0,21,169
chr10	76442642	.	GGAGA	G	220.40	PASS	AB=0.902;AC=9;AF=0.196;AN=46;BaseQRankSum=3.069;DP=399;FS=0.000;HRun=0;HaplotypeScore=75.9271;InbreedingCoeff=0.3018;MQ=63.02;MQ0=27;MQRankSum=-0.887;QD=2.02;ReadPosRankSum=1.848;VQSLOD=0.9122;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,1:17:48.36:58,0,48	0/0:3,0:3:6:0,6,66	./.	0/1:40,0:16:0.17:0,0,0	1/1:9,0:9:3.01:37,3,0	0/0:16,0:15:8.98:0,9,131	0/0:21,0:22:11.89:0,12,171	./.	0/0:15,0:15:14.78:0,15,231	0/0:18,0:16:3.01:0,3,57	./.	0/0:16,0:16:12.02:0,12,202	0/0:10,0:9:8.96:0,9,69	0/0:7,0:6:3.01:0,3,70	0/0:10,0:9:6.02:0,6,116	0/0:4,0:6:11.78:0,12,182	0/0:33,0:32:40.26:0,40,612	0/1:13,2:16:23.31:105,0,23	./.	0/0:10,1:11:0:0,0,0	0/0:15,0:14:3.01:0,3,41	0/0:11,0:11:3.01:0,3,56	0/0:11,0:11:3.01:0,3,70	0/0:24,0:24:30.04:0,30,471	./.	1/1:9,0:9:1.31:43,1,0	1/1:15,1:16:8.95:92,9,0	0/0:4,0:4:0:0,0,0
chr10	76442696	.	AGAG	A	2966.06	PASS	AB=1.000;AC=19;AF=0.352;AN=54;BaseQRankSum=6.353;DP=335;FS=2.907;HRun=0;HaplotypeScore=52.8697;InbreedingCoeff=0.8408;MQ=53.51;MQ0=14;MQRankSum=-2.935;QD=20.04;ReadPosRankSum=1.298;VQSLOD=3.3844;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:21:36.12:579,36,0	0/0:2,0:2:6.02:0,6,128	0/0:20,0:5:12.04:0,12,248	0/1:32,0:12:2.22:2,0,277	./.	0/0:12,0:12:36.12:0,36,786	0/0:24,0:22:51.17:0,51,1092	0/0:7,0:7:21.07:0,21,469	0/0:9,0:9:27.05:0,27,556	0/0:14,0:14:33.11:0,33,706	0/0:4,0:4:9.03:0,9,201	0/0:7,0:7:15.03:0,15,257	0/0:3,0:3:9.03:0,9,201	0/0:5,0:5:12.04:0,12,268	0/0:12,0:12:33.11:0,33,710	0/0:8,0:8:24.08:0,24,504	0/0:22,0:22:57.20:0,57,1269	1/1:3,10:13:21.07:343,21,0	1/1:2,12:14:33.05:459,33,0	1/1:2,8:10:11.98:180,12,0	1/1:0,22:22:40.02:632,40,0	0/0:3,0:3:6.02:0,6,134	0/0:9,0:8:18.06:0,18,397	0/0:25,0:22:63.21:0,63,1334	1/1:1,5:6:8.98:134,9,0	1/1:2,11:13:33.10:491,33,0	1/1:1,7:8:18.06:294,18,0	1/1:2,6:7:3.01:49,3,0
chr10	76442793	.	G	GGAGAGA	4098.86	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=3.746;DP=510;FS=0.000;HRun=0;HaplotypeScore=111.8223;InbreedingCoeff=0.6434;MQ=57.36;MQ0=21;MQRankSum=-5.565;QD=10.02;ReadPosRankSum=-3.973;VQSLOD=0.9756;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:17:9.01:92,9,0	1/1:9,0:7:9.03:247,9,0	1/1:38,0:19:0.47:1,0,0	0/1:62,0:19:14.34:14,0,51	1/1:15,0:14:15.04:295,15,0	1/1:7,0:9:3.01:39,3,0	1/1:10,5:17:10.02:302,10,0	1/1:15,0:13:9.01:137,9,0	0/0:15,0:16:33.50:0,33,616	1/1:14,0:10:18.03:247,18,0	1/1:10,1:13:6.02:165,6,0	0/0:12,0:13:27.08:0,27,463	0/0:16,0:15:28.83:0,29,449	1/1:6,5:11:12.04:325,12,0	1/1:8,8:19:17.88:399,18,0	1/1:4,5:10:6.02:136,6,0	1/1:6,3:9:3.01:98,3,0	1/1:11,0:11:11.99:236,12,0	1/1:15,0:14:11.97:146,12,0	0/1:23,0:21:2.57:46,0,3	1/1:23,0:22:8.99:96,9,0	0/0:11,0:13:15.05:0,15,289	0/0:17,0:17:21.06:0,21,368	0/0:24,0:24:30.10:0,30,618	1/1:20,0:19:9.03:233,9,0	1/1:18,0:18:12.02:153,12,0	1/1:16,0:16:24.08:563,24,0	1/1:11,0:9:6.02:130,6,0
chr10	76442824	.	G	GAGAGAT	4857.64	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=6.709;DP=509;FS=0.427;HRun=0;HaplotypeScore=108.5076;InbreedingCoeff=0.2614;MQ=70.93;MQ0=20;MQRankSum=-5.694;QD=15.04;ReadPosRankSum=0.064;VQSLOD=4.1983;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:17.90:213,18,0	0/1:8,0:8:97.97:100,0,98	0/0:40,0:21:30.68:0,31,423	0/0:50,0:20:24.80:0,25,417	1/1:0,16:22:20.79:422,21,0	0/1:13,0:12:24.41:24,0,120	0/1:15,0:14:99:201,0,157	0/1:25,0:23:21.20:21,0,460	0/0:19,0:19:53.69:0,54,941	0/1:18,0:18:95.57:96,0,290	0/1:15,0:15:92.69:93,0,211	0/0:17,0:17:42.02:0,42,736	0/0:15,0:15:36.06:0,36,649	0/1:12,0:12:88.86:247,0,89	0/1:19,0:18:99:254,0,137	0/1:9,0:9:59.92:88,0,60	0/1:11,0:11:61.96:62,0,88	1/1:9,1:10:21.03:498,21,0	1/1:22,0:22:53.85:479,54,0	1/1:1,0:21:14.73:140,15,0	1/1:14,0:14:23.96:262,24,0	0/0:10,0:10:24.04:0,24,436	0/0:12,0:12:36.01:0,36,557	0/0:23,0:23:63.05:0,63,1032	1/1:0,12:18:9.03:287,9,0	1/1:1,0:19:21.47:511,21,0	1/1:0,13:19:21.07:654,21,0	1/1:3,1:15:9.03:208,9,0
chr10	76443624	.	A	ACC	1901.68	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-4.755;DP=392;FS=14.044;HRun=7;HaplotypeScore=57.6429;InbreedingCoeff=0.9056;MQ=78.29;MQ0=0;MQRankSum=-0.225;QD=16.68;ReadPosRankSum=0.037;VQSLOD=0.1277;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45:0,45,503	0/0:7,0:7:9.01:0,9,94	0/0:16,0:17:22.86:0,23,322	0/0:14,0:14:4.71:0,5,134	1/1:3,1:4:6.01:75,6,0	0/0:17,0:17:39.02:0,39,417	0/0:13,0:13:27.06:0,27,314	0/0:20,0:20:42.05:0,42,472	0/0:16,0:16:33.07:0,33,382	0/0:17,0:17:33.05:0,33,359	0/0:10,0:10:24.05:0,24,269	0/0:15,0:15:36.08:0,36,419	0/0:8,0:8:15.04:0,15,174	0/0:14,0:14:21.02:0,21,244	0/0:16,0:16:39.04:0,39,419	0/0:11,0:11:27.05:0,27,304	0/0:15,0:15:30.07:0,30,349	1/1:0,12:12:21.07:345,21,0	1/1:2,6:8:18.05:271,18,0	1/1:2,5:7:6.02:98,6,0	1/1:8,30:41:35.80:575,36,0	0/0:11,0:11:27.07:0,27,313	0/0:15,0:15:39.11:0,39,453	0/0:25,0:25:51.08:0,51,570	1/1:5,9:16:20.55:281,21,0	1/1:13,0:13:14.99:192,15,0	1/1:3,6:9:6.02:98,6,0	1/1:1,3:4:12:167,12,0
chr10	76443717	.	TCC	T	1384.76	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=10.011;DP=430;FS=14.188;HRun=3;HaplotypeScore=96.9975;InbreedingCoeff=0.9332;MQ=68.36;MQ0=6;MQRankSum=-3.907;QD=10.33;ReadPosRankSum=1.318;VQSLOD=-0.4553;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:22.08:252,22,0	0/0:11,0:11:16.17:0,16,312	0/0:26,0:20:53.51:0,54,896	0/0:29,0:21:43.99:0,44,826	1/1:14,2:13:23.28:185,23,0	0/0:18,0:18:48.15:0,48,894	0/0:16,0:16:28.43:0,28,524	0/0:23,0:22:63.01:0,63,1050	0/0:13,0:13:33.08:0,33,594	0/0:18,0:17:42.29:0,42,672	0/0:20,0:18:38.85:0,39,685	0/0:14,0:15:45.11:0,45,830	0/0:13,0:13:39.13:0,39,750	0/0:10,0:9:24.08:0,24,460	0/0:10,0:9:18.05:0,18,317	0/0:13,0:13:26.30:0,26,498	0/0:15,0:15:35.86:0,36,647	1/1:6,0:6:14.89:110,15,0	1/1:12,0:12:17.64:172,18,0	1/1:10,0:10:17.81:160,18,0	1/1:16,0:15:7.14:63,7,0	0/0:18,0:18:44.82:0,45,855	0/0:9,0:9:24.08:0,24,463	0/0:19,0:19:45.09:0,45,785	1/1:11,4:15:29.68:215,30,0	1/1:14,0:11:2.12:127,2,0	1/1:11,0:11:16.71:207,17,0	1/1:8,0:8:7.45:103,7,0
chr10	76443723	.	TCC	T	1416.34	PASS	AB=0.952;AC=21;AF=0.375;AN=56;BaseQRankSum=10.183;DP=457;FS=6.968;HRun=3;HaplotypeScore=108.3770;InbreedingCoeff=0.7910;MQ=62.16;MQ0=8;MQRankSum=-3.833;QD=9.02;ReadPosRankSum=-0.037;VQSLOD=0.0745;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:25:31.39:245,31,0	0/0:12,0:12:0.63:0,1,188	0/0:23,0:17:50.58:0,51,817	0/0:26,0:18:33.38:0,33,719	1/1:13,2:13:17.79:138,18,0	0/0:18,0:18:45.15:0,45,841	0/0:19,0:18:26.39:0,26,468	0/0:25,0:24:44.02:0,44,855	0/0:12,0:12:33.09:0,33,585	0/1:19,1:19:73.20:73,0,527	0/0:20,0:18:32.84:0,33,576	0/0:17,0:17:46.04:0,46,802	0/0:18,0:17:48.36:0,48,701	0/0:16,0:15:3.70:0,4,437	0/0:9,0:8:15.05:0,15,288	0/0:15,0:15:23.26:0,23,435	0/0:20,0:20:2.06:0,2,606	1/1:6,0:6:11.92:89,12,0	1/1:10,0:10:19.35:164,19,0	1/1:10,0:10:17.70:164,18,0	1/1:17,0:16:7.15:64,7,0	0/0:21,0:21:45.54:0,46,742	0/0:11,0:11:27.09:0,27,490	0/0:18,0:18:42.06:0,42,695	1/1:15,4:18:29.68:213,30,0	1/1:13,0:10:6.08:147,6,0	1/1:12,0:12:24.64:225,25,0	1/1:8,0:8:8.81:99,9,0
chr10	76445195	.	AGTGTGTGC	A	4506.12	PASS	AB=0.743;AC=17;AF=0.304;AN=56;BaseQRankSum=9.748;DP=657;FS=0.446;HRun=0;HaplotypeScore=190.8369;InbreedingCoeff=0.5877;MQ=63.79;MQ0=6;MQRankSum=-7.550;QD=17.20;ReadPosRankSum=1.826;VQSLOD=3.9726;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:37:15.25:15,0,274	0/0:13,0:13:38.92:0,39,1116	0/1:30,0:18:2.02:2,0,434	0/0:25,0:19:43.60:0,44,617	1/1:1,19:23:15.04:323,15,0	0/0:19,0:19:51.05:0,51,1238	0/0:20,0:20:56.99:0,57,1331	0/0:27,0:27:56.95:0,57,661	0/0:17,0:17:45.05:0,45,1149	0/0:31,0:30:87.08:0,87,2559	0/0:16,0:16:39.02:0,39,919	0/0:22,0:22:51.02:0,51,1336	0/0:18,0:18:41.95:0,42,1190	0/0:12,0:12:33.04:0,33,898	0/0:41,0:41:90.97:0,91,2174	0/0:21,0:20:54.01:0,54,1213	0/0:29,0:29:78.02:0,78,2157	0/1:3,16:20:12.76:406,0,13	0/1:9,11:22:5.83:390,0,6	1/1:4,17:23:30.10:788,30,0	1/1:5,22:29:3.01:71,3,0	0/0:23,0:23:53.35:0,53,1337	0/0:22,0:22:59.86:0,60,1433	0/0:39,0:38:99:0,99,2776	1/1:2,16:18:24.08:652,24,0	0/1:3,19:25:15.18:827,0,15	1/1:2,23:26:28.98:794,29,0	1/1:0,8:8:9.03:239,9,0
chr10	76445203	.	CGT	C	872.84	PASS	AB=0.911;AC=28;AF=0.500;AN=56;BaseQRankSum=8.737;DP=696;FS=9.980;HRun=0;HaplotypeScore=143.3652;InbreedingCoeff=-0.3081;MQ=60.47;MQ0=8;MQRankSum=-7.357;QD=1.62;ReadPosRankSum=3.295;VQSLOD=2.0272;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:46:12.85:51,0,13	0/1:13,1:15:51.51:52,0,226	0/0:34,0:18:6.28:0,6,46	0/0:29,0:18:3.01:0,3,43	0/1:23,0:23:3.48:39,0,3	0/1:19,0:20:21.90:22,0,246	0/1:24,1:25:9.97:10,0,297	0/0:30,0:30:5.23:0,5,315	0/1:13,4:17:46.20:46,0,207	0/0:32,2:33:8.21:0,8,663	0/1:14,1:15:6.45:6,0,224	0/1:17,1:19:7.53:8,0,307	0/1:16,4:21:4.57:5,0,265	0/1:13,1:14:9.47:9,0,206	0/1:29,4:33:99:122,0,418	0/1:16,2:18:50.99:51,0,209	0/0:29,1:30:29.68:0,30,650	0/1:20,0:20:22.93:44,0,23	0/1:19,0:19:10.56:29,0,11	1/1:21,0:21:25.94:120,26,0	1/1:30,0:30:0.89:2,1,0	0/1:26,1:29:36.58:37,0,330	0/1:21,1:24:27.93:28,0,275	0/1:38,10:48:44.24:44,0,915	1/1:17,0:17:22.38:102,22,0	0/1:26,0:26:68.37:68,0,71	1/1:27,0:27:6.76:105,7,0	1/1:8,0:8:7.82:32,8,0
chr10	76445270	.	T	TA	9807.21	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-8.726;DP=695;FS=0.000;HRun=1;HaplotypeScore=93.0438;InbreedingCoeff=0.9996;MQ=61.78;MQ0=0;MQRankSum=1.784;QD=40.19;ReadPosRankSum=0.848;VQSLOD=5.0866;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,99,1246	1/1:0,12:12:33.07:469,33,0	0/0:32,0:25:57.11:0,57,660	0/0:36,0:30:84.18:0,84,991	0/0:27,0:27:78.19:0,78,938	1/1:1,22:23:63.21:944,63,0	1/1:1,23:24:60.20:899,60,0	1/1:2,29:31:90.27:1322,90,0	0/0:18,0:18:51.17:0,51,662	1/1:1,36:37:99:1604,111,0	1/1:0,20:20:60.16:874,60,0	0/0:18,0:18:54.18:0,54,699	0/0:10,0:10:24.08:0,24,311	1/1:0,14:14:39.13:575,39,0	1/1:1,24:25:60.20:899,60,0	1/1:1,17:18:48.11:693,48,0	1/1:4,36:40:99:1528,102,0	0/0:26,0:26:78.18:0,78,986	0/0:16,0:16:48.16:0,48,623	0/0:25,0:25:72.23:0,72,929	0/0:44,0:44:99:0,105,1324	0/0:13,0:13:39.13:0,39,501	0/0:13,0:13:36.12:0,36,467	0/0:43,0:43:99:0,117,1486	0/0:16,0:16:45.15:0,45,580	0/0:31,0:31:90.24:0,90,1137	0/0:26,0:26:78.23:0,78,979	0/0:15,0:15:45.15:0,45,584
chr10	76445933	.	G	GGT	255.67	PASS	AB=0.683;AC=15;AF=0.268;AN=56;BaseQRankSum=9.117;DP=634;FS=31.476;HRun=0;HaplotypeScore=108.5952;InbreedingCoeff=0.4350;MQ=68.93;MQ0=27;MQRankSum=-1.463;QD=1.04;ReadPosRankSum=-1.920;VQSLOD=0.0640;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:94.04:0,94,1224	1/1:3,0:9:1.89:8,2,0	0/0:38,0:28:77.82:0,78,1050	0/0:41,0:26:57.40:0,57,798	0/0:14,0:13:15.34:0,15,174	1/1:2,0:17:11.11:62,11,0	0/1:4,0:20:18.13:18,0,21	0/0:10,0:26:3.21:0,3,85	0/0:17,0:17:48.09:0,48,633	0/1:2,0:9:9.28:17,0,9	0/1:4,0:8:0.58:1,0,5	0/0:16,0:16:45.13:0,45,636	0/0:6,0:6:15.05:0,15,218	1/1:2,0:22:20.18:124,20,0	0/1:2,0:16:0:0,0,0	0/1:5,1:17:0.88:59,0,1	1/1:5,0:37:5.19:87,5,0	0/0:23,0:23:55.62:0,56,615	0/0:20,0:20:35.61:0,36,451	0/0:20,0:20:32.89:0,33,405	0/1:50,0:48:30.66:31,0,590	0/0:18,0:18:38.31:0,38,598	0/0:10,0:10:26.84:0,27,361	0/0:41,0:40:99:0,114,1613	0/1:13,0:13:0.92:1,0,170	0/0:20,0:23:12.73:0,13,460	0/0:26,0:26:33.33:0,33,449	0/0:4,0:4:4.83:0,5,49
chr10	76445935	.	G	GGTGTGT	4657.05	PASS	AB=0.818;AC=34;AF=0.654;AN=52;BaseQRankSum=3.168;DP=663;FS=1.210;HRun=0;HaplotypeScore=150.3003;InbreedingCoeff=0.6407;MQ=66.88;MQ0=33;MQRankSum=-0.855;QD=11.50;ReadPosRankSum=-1.060;VQSLOD=3.8139;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:43:26.97:0,27,377	1/1:11,0:9:10.47:102,10,0	./.	./.	1/1:14,0:13:3.01:42,3,0	1/1:18,0:18:28.50:235,29,0	0/1:23,0:20:37.38:90,0,37	1/1:33,0:30:28.19:312,28,0	0/0:16,0:16:23.98:0,24,368	1/1:11,0:10:1.67:99,2,0	1/1:11,0:9:6.01:86,6,0	0/0:16,0:16:18.06:0,18,366	0/0:6,0:6:9.03:0,9,145	1/1:24,0:20:27.75:328,28,0	1/1:19,0:16:2.99:24,3,0	1/1:23,0:17:14.03:153,14,0	1/1:41,0:37:22.84:230,23,0	1/1:16,5:24:16.43:314,16,0	1/1:20,0:20:15.05:339,15,0	0/0:13,0:19:2.75:0,3,42	1/1:52,0:50:41.65:1103,42,0	0/0:18,0:20:21.97:0,22,429	0/0:11,0:13:9.67:0,10,130	0/0:41,0:41:66.10:0,66,1208	1/1:5,7:18:8.96:212,9,0	1/1:24,1:25:34.75:611,35,0	0/1:12,1:28:39.83:224,0,40	1/1:3,3:7:6.02:152,6,0
chr10	76446377	.	T	TA	6644.75	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-11.480;DP=583;FS=2.859;HRun=6;HaplotypeScore=62.4360;InbreedingCoeff=0.9956;MQ=78.23;MQ0=0;MQRankSum=-1.651;QD=32.41;ReadPosRankSum=0.681;VQSLOD=5.3327;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,144,1448	1/1:0,9:9:21.07:264,21,0	0/0:14,0:14:20.99:0,21,197	0/0:23,0:22:16.54:0,17,286	0/0:13,0:13:33.07:0,33,337	1/1:1,19:20:51.16:636,51,0	1/1:1,37:38:99:1246,99,0	1/1:3,24:27:72.23:905,72,0	0/0:19,0:19:54.11:0,54,544	1/1:2,20:22:63.20:790,63,0	1/1:1,13:14:33.02:391,33,0	0/0:22,0:22:60.11:0,60,599	0/0:19,0:19:57.06:0,57,556	1/1:0,19:19:48.15:604,48,0	1/1:1,9:10:27.09:340,27,0	1/1:0,16:16:42.13:528,42,0	1/1:4,26:30:75.24:941,75,0	0/0:21,0:21:60.14:0,60,612	0/0:18,0:18:51.10:0,51,514	0/0:13,0:13:33.04:0,33,323	0/0:31,0:31:84.18:0,84,851	0/0:15,0:15:39.04:0,39,377	0/0:22,0:22:60.07:0,60,587	0/0:31,0:31:81.18:0,81,826	0/0:16,0:16:45.10:0,45,458	0/0:15,0:14:42.09:0,42,428	0/0:28,0:28:81.16:0,81,819	0/0:6,0:6:18.04:0,18,184
chr10	76446545	.	TA	T	4341.01	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-4.425;DP=560;FS=7.589;HRun=11;HaplotypeScore=73.7714;InbreedingCoeff=0.9336;MQ=72.43;MQ0=0;MQRankSum=-1.948;QD=19.38;ReadPosRankSum=1.646;VQSLOD=5.9041;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:65.92:542,66,0	1/1:2,13:15:32.96:271,33,0	0/0:17,0:13:0.16:0,0,84	0/0:17,0:13:6.91:0,7,129	0/0:5,0:24:51.77:0,52,263	1/1:2,28:30:83.90:690,84,0	1/1:2,15:17:9.97:288,10,0	1/1:5,15:20:37.95:309,38,0	0/0:18,0:18:52.01:0,52,545	1/1:2,23:25:68.91:566,69,0	1/1:3,15:18:41.89:339,42,0	0/0:17,0:17:45.10:0,45,471	0/0:17,0:17:39.07:0,39,405	1/1:2,15:17:38.95:320,39,0	1/1:3,10:14:31.99:252,32,0	1/1:2,8:10:20.97:172,21,0	1/1:1,26:27:71.90:591,72,0	0/0:5,0:25:57.12:0,57,304	0/0:10,0:27:57.38:0,57,311	0/0:5,0:21:51.66:0,52,290	0/0:1,0:9:17.04:0,17,85	0/0:9,1:10:10.58:0,11,269	0/0:25,1:26:41.50:0,42,633	0/0:20,0:20:57.11:0,57,592	0/0:6,0:29:51.13:0,51,256	0/0:3,0:28:71.97:0,72,398	0/0:4,0:21:40.13:0,40,218	0/0:1,0:7:14.27:0,14,72
chr10	76446860	.	T	TG	7223.74	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-15.018;DP=582;FS=7.095;HRun=3;HaplotypeScore=55.9031;InbreedingCoeff=0.9975;MQ=83.82;MQ0=0;MQRankSum=-2.148;QD=35.76;ReadPosRankSum=0.158;VQSLOD=5.1594;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1308	1/1:0,8:8:21.07:293,21,0	0/0:15,0:15:35.33:0,35,405	0/0:21,0:20:24.11:0,24,428	0/0:12,0:12:36.10:0,36,421	1/1:0,20:20:57.19:798,57,0	1/1:1,29:30:69.23:965,69,0	1/1:2,20:22:57.17:776,57,0	0/0:20,0:20:57.16:0,57,672	1/1:2,22:24:69.22:952,69,0	1/1:0,12:12:27.09:378,27,0	0/0:27,0:27:78.23:0,78,926	0/0:14,0:14:42.11:0,42,490	1/1:1,16:17:39.13:546,39,0	1/1:1,15:16:42.14:583,42,0	1/1:0,10:10:27.09:378,27,0	1/1:1,42:43:99:1554,111,0	0/0:30,0:30:90.22:0,90,1051	0/0:26,0:26:75.21:0,75,887	0/0:16,0:16:42.12:0,42,492	0/0:46,0:46:99:0,135,1583	0/0:15,0:15:44.73:0,45,513	0/0:19,0:19:57.15:0,57,663	0/0:25,0:25:75.18:0,75,872	0/0:20,0:20:57.17:0,57,684	0/0:15,0:15:45.14:0,45,539	0/0:14,0:14:36.10:0,36,420	0/0:6,0:6:18.06:0,18,216
chr10	76447300	.	T	TG	4179.16	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-11.210;DP=476;FS=3.551;HRun=7;HaplotypeScore=48.9522;InbreedingCoeff=0.9495;MQ=72.56;MQ0=0;MQRankSum=-1.236;QD=23.75;ReadPosRankSum=-0.260;VQSLOD=3.3745;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.05:0,57,542	1/1:1,7:8:18.06:217,18,0	0/0:14,0:15:27.63:0,28,279	0/1:13,0:13:0.44:0,0,178	0/0:23,0:23:63.07:0,63,595	1/1:4,15:19:16.64:479,17,0	1/1:4,15:19:36.11:435,36,0	1/1:6,20:27:60.12:694,60,0	0/0:11,0:11:30.05:0,30,289	1/1:1,12:13:36.11:435,36,0	1/1:2,8:10:18.06:217,18,0	0/0:19,0:19:51.08:0,51,492	0/0:18,0:18:45.07:0,45,434	1/1:2,16:18:36.11:435,36,0	1/1:2,10:12:24.07:290,24,0	1/1:1,9:10:21.06:254,21,0	1/1:4,23:27:60.18:723,60,0	0/0:21,0:21:57.05:0,57,541	0/0:26,0:26:63.10:0,63,608	0/0:10,0:10:27.04:0,27,260	0/0:38,0:38:98.58:0,99,923	0/0:20,0:20:60.10:0,60,578	0/0:8,0:8:15.02:0,15,145	0/0:17,0:17:42.05:0,42,399	0/0:15,0:15:33.05:0,33,318	0/0:20,0:20:51.08:0,51,492	0/0:12,0:12:30.92:0,31,286	0/0:5,0:5:15.02:0,15,144
chr10	76447804	.	CCTT	C	1136.58	PASS	AB=0.929;AC=10;AF=0.200;AN=50;BaseQRankSum=2.090;DP=519;FS=0.638;HRun=0;HaplotypeScore=97.0181;InbreedingCoeff=0.3937;MQ=44.95;MQ0=51;MQRankSum=-4.668;QD=9.09;ReadPosRankSum=1.432;VQSLOD=3.1616;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:19:29.87:0,30,457	1/1:1,10:7:14.44:251,14,0	./.	./.	0/0:19,0:18:48.05:0,48,605	0/0:19,2:17:6.21:0,6,134	1/1:13,13:20:11.04:278,11,0	0/1:9,6:8:64.49:159,0,64	0/0:32,0:30:72.24:0,72,1144	0/1:24,0:16:36.07:521,0,36	0/1:14,0:10:12.51:13,0,20	0/0:22,0:20:60.19:0,60,916	0/0:14,0:13:33.10:0,33,480	0/1:20,0:17:7.89:8,0,30	1/1:14,1:8:3.01:51,3,0	./.	0/0:23,1:17:2.50:0,2,19	0/0:18,0:17:38.79:0,39,542	0/0:11,0:10:27.09:0,27,389	0/0:21,0:21:47.94:0,48,633	0/0:26,0:21:47.41:0,47,504	0/0:32,0:29:75.12:0,75,1172	0/0:23,0:20:52.42:0,52,793	0/0:25,0:20:48.06:0,48,688	0/0:22,0:21:57.08:0,57,686	0/0:16,0:15:42.10:0,42,545	0/0:8,0:7:12.04:0,12,166	0/0:18,0:12:27.05:0,27,401
chr10	76447807	.	T	TCTC	1410.30	PASS	AB=0.871;AC=18;AF=0.346;AN=52;BaseQRankSum=4.209;DP=528;FS=6.176;HRun=0;HaplotypeScore=100.1116;InbreedingCoeff=0.0637;MQ=45.19;MQ0=52;MQRankSum=-0.987;QD=5.05;ReadPosRankSum=-1.979;VQSLOD=1.6198;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:19:38.09:0,38,528	1/1:11,0:7:15.01:251,15,0	./.	./.	0/1:20,0:19:25.46:25,0,399	0/1:6,15:17:41.71:50,0,42	0/1:24,1:19:24.71:94,0,25	0/1:16,0:9:71.51:159,0,72	0/0:33,0:31:72.25:0,72,1149	1/1:8,16:17:37.52:593,38,0	1/1:3,10:10:3.01:56,3,0	0/0:22,0:20:54:0,54,809	0/0:14,0:13:30.10:0,30,480	0/1:4,15:17:3.63:51,0,4	1/1:3,12:8:3.01:47,3,0	0/0:3,14:14:0:0,0,0	0/1:9,16:18:4.44:4,0,14	0/0:18,0:17:14.62:0,15,496	0/0:10,0:9:5.11:0,5,182	0/1:20,0:20:28.74:29,0,453	0/1:27,0:22:30.12:30,0,327	0/0:32,0:29:69.24:0,69,1102	0/0:23,0:20:53.29:0,53,796	0/0:26,0:21:25.44:0,25,554	0/1:22,0:21:82.46:82,0,381	0/1:18,0:16:95.54:96,0,270	0/0:8,0:7:5.29:0,5,64	0/0:18,0:12:1.30:0,1,216
chr10	76447880	.	TTCC	T	1987.58	PASS	AB=0.802;AC=18;AF=0.333;AN=54;BaseQRankSum=5.154;DP=547;FS=3.319;HRun=0;HaplotypeScore=97.2443;InbreedingCoeff=0.7781;MQ=50.85;MQ0=41;MQRankSum=1.677;QD=11.04;ReadPosRankSum=1.104;VQSLOD=3.4368;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:54.02:0,54,852	0/0:6,0:7:14.98:0,15,163	./.	0/0:11,0:4:6.02:0,6,112	1/1:3,14:17:35.78:390,36,0	0/0:16,0:21:26.56:0,27,443	0/0:24,0:21:36.01:0,36,260	0/0:24,0:16:17.95:0,18,158	0/0:27,0:25:51.12:0,51,871	0/0:25,0:31:49.58:0,50,760	0/0:6,0:10:18.34:0,18,226	0/1:11,0:10:17.95:18,0,264	0/0:21,0:19:37.81:0,38,693	0/0:7,0:6:11.98:0,12,133	0/0:21,0:20:35.78:0,36,362	0/0:14,0:14:18.44:0,18,203	0/0:19,0:18:44.01:0,44,440	0/1:10,19:27:0.07:156,0,0	1/1:13,8:14:23.98:281,24,0	1/1:5,9:13:20.94:227,21,0	1/1:14,23:33:0.07:199,0,0	0/0:26,0:26:48.05:0,48,730	0/0:22,0:21:36.03:0,36,581	0/0:31,0:28:63.16:0,63,1089	1/1:5,7:12:9.03:130,9,0	1/1:7,12:18:33.09:438,33,0	1/1:1,11:12:18.06:253,18,0	1/1:2,6:6:6.02:87,6,0
chr10	76448241	.	T	TG	10978.72	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=9.761;DP=653;FS=0.351;HRun=4;HaplotypeScore=110.4803;InbreedingCoeff=0.9958;MQ=89.20;MQ0=1;MQRankSum=-8.222;QD=25.59;ReadPosRankSum=3.869;VQSLOD=3.5241;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:43.05:0,43,226	1/1:1,9:9:18.01:214,18,0	0/0:28,0:27:59.39:0,59,646	0/0:33,0:33:81.24:0,81,982	1/1:11,13:24:28.41:437,28,0	1/1:2,11:14:27.09:351,27,0	1/1:5,30:35:87.75:1127,88,0	1/1:7,17:24:42.55:510,43,0	0/0:16,0:16:35.96:0,36,377	1/1:9,15:24:51.11:621,51,0	1/1:5,10:21:33.02:392,33,0	0/0:24,0:24:46.36:0,46,479	0/0:26,0:26:64.72:0,65,705	1/1:3,20:22:48.15:616,48,0	1/1:0,27:27:75.24:973,75,0	1/1:3,29:32:87.23:1110,87,0	1/1:3,32:35:81.26:1056,81,0	1/1:2,25:27:41.17:881,41,0	1/1:2,11:15:33.47:395,33,0	1/1:9,5:14:19:233,19,0	1/1:2,23:25:29.62:388,30,0	0/0:18,0:18:30.08:0,30,333	0/0:24,0:24:45.11:0,45,499	0/0:26,0:25:75.18:0,75,830	1/1:4,13:20:17.89:210,18,0	1/1:13,12:25:35.62:444,36,0	1/1:3,15:18:42.12:530,42,0	1/1:2,12:14:39.09:490,39,0
chr10	76448245	.	GA	G	4526.84	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=13.925;DP=596;FS=2.906;HRun=1;HaplotypeScore=114.5778;InbreedingCoeff=0.9795;MQ=92.51;MQ0=1;MQRankSum=-6.591;QD=11.49;ReadPosRankSum=2.639;VQSLOD=3.4344;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:5.82:0,6,116	1/1:10,0:9:18.16:96,18,0	0/0:30,0:29:31.74:0,32,839	0/0:31,0:31:93.10:0,93,1379	1/1:15,1:15:35.60:175,36,0	1/1:13,0:13:27.76:144,28,0	1/1:34,1:35:88.76:483,89,0	1/1:20,0:20:44.27:284,44,0	0/0:15,0:15:39.01:0,39,509	1/1:22,1:23:56.96:345,57,0	1/1:18,0:18:31.22:167,31,0	0/0:24,0:24:55.97:0,56,712	0/0:24,0:24:70.75:0,71,969	1/1:21,0:20:42.55:197,43,0	1/1:27,0:27:70.29:353,70,0	1/1:30,0:30:66.11:318,66,0	1/1:33,0:33:75.23:396,75,0	1/1:28,0:28:23.04:300,23,0	1/1:14,0:14:32.36:176,32,0	1/1:13,1:14:25.39:158,25,0	1/1:25,0:24:34.44:190,34,0	0/0:11,0:11:33.10:0,33,484	0/0:18,0:18:48.15:0,48,711	0/0:29,0:28:84.16:0,84,1175	1/1:17,0:17:18.49:93,18,0	1/1:21,0:21:48.54:263,49,0	1/1:14,1:15:37.95:193,38,0	1/1:14,0:14:37.60:194,38,0
chr10	76448438	.	C	CTCT	3557.02	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=11.738;DP=590;FS=2.672;HRun=0;HaplotypeScore=106.5848;InbreedingCoeff=0.9023;MQ=54.39;MQ0=9;MQRankSum=-8.353;QD=16.47;ReadPosRankSum=0.677;VQSLOD=3.6342;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.10:0,87,1209	1/1:3,5:8:3.01:66,3,0	0/0:26,0:7:9.50:0,9,149	0/0:22,0:8:19.67:0,20,136	0/0:15,0:14:29.66:0,30,377	1/1:1,17:18:24.02:441,24,0	1/1:8,31:39:4.96:301,5,0	1/1:21,0:21:32.53:230,33,0	0/0:12,0:12:35.08:0,35,456	1/1:1,16:18:25.71:455,26,0	1/1:3,8:11:11.95:170,12,0	0/0:21,0:21:56.46:0,56,742	0/0:22,0:22:60.11:0,60,843	1/1:0,21:21:18.06:391,18,0	1/1:1,20:21:9.03:173,9,0	1/1:1,30:32:18.52:689,19,0	1/1:25,2:27:57.76:642,58,0	0/0:24,0:24:66.06:0,66,962	0/0:14,0:14:42:0,42,559	0/0:17,0:16:42.89:0,43,552	0/0:46,0:46:99:0,122,1727	0/0:14,0:14:33.10:0,33,534	0/0:16,0:16:48.13:0,48,733	0/0:28,0:28:75.08:0,75,1097	0/0:10,0:9:26.97:0,27,299	0/0:23,1:24:2.73:0,3,831	0/0:19,0:19:48.14:0,48,779	0/0:12,0:12:32.95:0,33,385
chr10	76448511	.	TTCC	T	6590.30	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=8.049;DP=622;FS=6.956;HRun=0;HaplotypeScore=101.8347;InbreedingCoeff=0.9771;MQ=70.27;MQ0=1;MQRankSum=-0.260;QD=32.46;ReadPosRankSum=2.148;VQSLOD=5.1054;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.26:0,87,1707	0/0:11,0:11:30.10:0,30,587	0/0:30,0:19:4.19:0,4,477	0/0:23,0:16:33.94:0,34,567	1/1:3,17:20:39.13:592,39,0	0/0:26,0:26:63.22:0,63,1307	0/0:28,0:28:81.27:0,81,1635	0/0:25,0:24:51.17:0,51,1014	0/0:15,0:15:42.14:0,42,885	0/0:18,0:18:54.18:0,54,1079	0/0:15,0:15:36.12:0,36,734	0/0:33,0:33:87.28:0,87,1735	0/0:17,0:17:42.08:0,42,722	0/0:15,0:15:24.08:0,24,508	0/0:24,0:24:57.20:0,57,1201	0/0:22,0:22:45.15:0,45,954	0/0:22,0:22:60.21:0,60,1256	1/1:3,29:32:69.17:1020,69,0	1/1:2,15:17:45.04:545,45,0	1/1:1,12:13:35.67:480,36,0	1/1:7,24:31:39.13:585,39,0	0/0:12,0:12:36.12:0,36,762	0/0:21,0:21:51.08:0,51,986	0/0:29,0:29:81.28:0,81,1642	1/1:2,19:21:48.16:729,48,0	1/1:3,25:28:75.19:1089,75,0	1/1:0,19:19:51.17:774,51,0	1/1:4,18:22:51.17:774,51,0
chr10	76448696	.	TCTC	T	7829.50	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=12.411;DP=632;FS=1.497;HRun=0;HaplotypeScore=106.0656;InbreedingCoeff=0.9690;MQ=69.95;MQ0=8;MQRankSum=-2.376;QD=37.28;ReadPosRankSum=1.298;VQSLOD=5.8896;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,125,2582	1/1:1,9:10:30.10:487,30,0	0/0:42,0:25:41.74:0,42,707	0/0:62,0:43:74.57:0,75,1450	0/0:12,0:12:36.12:0,36,796	1/1:1,22:23:51.12:816,51,0	1/1:1,21:22:18.88:483,19,0	1/1:0,36:36:99:1548,102,0	0/0:19,0:19:57.20:0,57,1226	1/1:1,21:22:63.16:942,63,0	1/1:0,14:14:35.99:508,36,0	0/0:24,0:24:69.17:0,69,1430	0/0:15,0:15:45.15:0,45,980	1/1:0,17:17:36.12:585,36,0	1/1:1,29:30:78.22:1264,78,0	1/1:0,15:15:33.11:549,33,0	1/1:2,19:21:39.03:649,39,0	0/0:33,0:33:75.31:0,75,1847	0/0:13,0:13:36.07:0,36,674	0/0:18,0:18:54.19:0,54,1219	0/0:22,0:22:63.22:0,63,1391	0/0:23,0:23:66.23:0,66,1446	0/0:11,0:11:33.11:0,33,731	0/0:27,0:27:75.22:0,75,1591	0/0:14,0:14:39:0,39,754	0/0:17,2:19:4.21:0,4,1049	0/0:20,0:20:60.15:0,60,1226	0/0:3,0:3:9.03:0,9,203
chr10	76449355	.	GCTTT	G	9921.95	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=18.693;DP=803;FS=0.000;HRun=0;HaplotypeScore=162.6102;InbreedingCoeff=1.0000;MQ=85.97;MQ0=0;MQRankSum=-5.948;QD=44.90;ReadPosRankSum=4.607;VQSLOD=4.8380;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,163,4246	0/0:21,0:21:63.17:0,63,1651	0/0:29,0:29:75.24:0,75,1838	0/0:28,0:28:69.17:0,69,1656	1/1:1,20:21:45.15:830,45,0	0/0:26,0:26:78.23:0,78,2076	0/0:36,0:36:99:0,108,2960	0/0:32,0:32:96.33:0,96,2607	0/0:37,0:37:99:0,105,2824	0/0:31,0:31:93.32:0,93,2532	0/0:24,0:24:72.25:0,72,1963	0/0:33,0:33:99:0,99,2692	0/0:27,0:27:81.28:0,81,2170	0/0:35,0:35:99:0,105,2818	0/0:29,0:29:87.30:0,87,2383	0/0:22,0:22:66.23:0,66,1808	0/0:28,0:28:81.28:0,81,2220	1/1:0,16:16:45.15:854,45,0	1/1:7,14:21:42.14:798,42,0	1/1:3,29:32:75.26:1397,75,0	1/1:4,39:43:93.32:1702,93,0	0/0:23,0:23:69.24:0,69,1890	0/0:24,0:24:72.25:0,72,1966	0/0:43,0:43:99:0,123,3185	1/1:0,18:18:48.16:908,48,0	1/1:1,29:30:84.29:1570,84,0	1/1:2,25:27:63.22:1196,63,0	1/1:1,12:13:36.12:666,36,0
chr10	76450619	.	T	TTC	3106.45	PASS	AB=0.662;AC=32;AF=0.615;AN=52;BaseQRankSum=-4.109;DP=514;FS=2.925;HRun=0;HaplotypeScore=69.8563;InbreedingCoeff=0.4943;MQ=67.78;MQ0=11;MQRankSum=1.601;QD=8.80;ReadPosRankSum=-0.089;VQSLOD=2.9961;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:34:11.08:103,11,0	1/1:9,0:8:3:25,3,0	0/0:27,0:16:9.03:0,9,103	0/0:41,0:19:16.29:0,16,172	0/1:8,12:19:4.39:379,0,4	1/1:16,0:14:5.49:64,5,0	1/1:15,0:13:5.23:49,5,0	1/1:38,0:33:8.45:66,8,0	0/0:13,0:14:24.07:0,24,276	1/1:19,0:17:0.86:2,1,0	1/1:14,0:14:5.02:30,5,0	0/0:9,0:9:12.03:0,12,138	0/0:11,0:12:26.91:0,27,289	./.	1/1:13,0:13:5.37:36,5,0	./.	1/1:13,0:13:4.23:14,4,0	0/1:12,10:20:45.04:223,0,45	1/1:20,11:30:3.62:448,4,0	1/1:5,11:17:27.09:418,27,0	0/1:10,8:17:22.44:127,0,22	0/0:9,0:9:20.65:0,21,216	0/0:14,0:15:26.91:0,27,290	0/0:18,0:18:36.10:0,36,414	1/1:5,9:13:21.07:325,21,0	1/1:15,13:28:7.07:483,7,0	1/1:2,11:13:18.06:279,18,0	0/1:8,10:16:16.42:214,0,16
chr10	76451533	.	TTCTC	T	41.47	PASS	AB=0.902;AC=5;AF=0.114;AN=44;BaseQRankSum=0.461;DP=631;FS=0.000;HRun=0;HaplotypeScore=114.4551;InbreedingCoeff=0.2000;MQ=68.50;MQ0=21;MQRankSum=1.228;QD=0.45;ReadPosRankSum=1.290;VQSLOD=1.6660;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,14:36:6.66:81,0,7	./.	./.	0/0:45,0:31:0:0,0,0	0/0:24,0:22:0.47:0,0,1	0/0:21,0:19:0.47:0,0,1	./.	0/0:42,0:41:21.05:0,21,367	0/1:18,0:17:19.61:20,0,297	0/0:20,0:19:18.32:0,18,299	0/0:12,0:12:3.01:0,3,32	0/0:15,0:13:17.55:0,18,338	0/1:18,0:18:31.78:32,0,332	./.	./.	0/0:21,0:18:9.64:0,10,109	0/0:25,0:20:6.02:0,6,78	0/0:15,0:15:15.99:0,16,259	0/0:28,0:27:0.94:0,1,2	0/0:32,0:30:3.01:0,3,31	./.	0/0:18,0:22:21.06:0,21,448	0/0:13,1:14:9.27:0,9,109	0/0:28,0:27:30.07:0,30,503	1/1:21,0:20:1.25:3,1,0	0/0:24,0:23:19.30:0,19,323	0/0:19,0:19:6.64:0,7,60	0/0:29,0:26:6.49:0,6,84
chr10	76451558	.	T	TCTCTCTTTCTCTCTCT	1883.70	PASS	AB=0.975;AC=22;AF=0.407;AN=54;BaseQRankSum=-0.474;DP=604;FS=0.503;HRun=0;HaplotypeScore=235.6459;InbreedingCoeff=0.0712;MQ=45.95;MQ0=36;MQRankSum=-6.031;QD=5.51;ReadPosRankSum=-5.612;VQSLOD=1.0307;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:50:50.65:0,51,588	0/1:10,0:9:20.26:20,0,39	./.	0/0:15,0:7:6.88:0,7,52	0/1:25,0:21:20.29:20,0,28	0/1:21,0:19:0.47:103,0,0	1/1:18,0:14:12.38:125,12,0	1/1:30,0:30:10.58:276,11,0	0/0:21,0:17:38.53:0,39,862	0/1:20,0:19:31.28:422,0,31	1/1:12,0:12:14.88:102,15,0	0/0:20,0:18:35.87:0,36,907	0/0:23,0:22:38.62:0,39,858	1/1:14,0:14:5.74:112,6,0	1/1:15,0:12:20.83:146,21,0	0/1:19,0:16:92.03:189,0,92	0/1:15,4:19:5.56:380,0,6	0/1:16,0:16:50.15:50,0,76	0/1:16,0:15:27.37:27,0,70	0/0:23,0:21:12.60:0,13,86	0/1:22,0:19:27.45:27,0,104	0/0:26,0:26:30.03:0,30,787	0/0:14,0:13:14.63:0,15,517	0/1:38,0:34:7.83:8,0,485	0/1:21,0:20:16.19:16,0,32	0/0:34,0:31:49.85:0,50,343	0/1:19,0:19:33.33:33,0,78	0/0:29,0:26:0.29:0,0,56
chr10	76451577	.	CGT	C	1396.83	PASS	AB=0.995;AC=23;AF=0.442;AN=52;BaseQRankSum=-2.843;DP=461;FS=4.090;HRun=0;HaplotypeScore=91.3064;InbreedingCoeff=0.3691;MQ=45.41;MQ0=40;MQRankSum=2.696;QD=5.31;ReadPosRankSum=-1.001;VQSLOD=2.5367;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:52:51.53:0,52,551	0/0:4,0:3:6.01:0,6,57	./.	./.	1/1:12,0:13:5.85:61,6,0	0/0:13,0:11:12.01:0,12,119	0/0:10,0:10:5.87:0,6,59	0/0:19,0:18:6.86:0,7,57	0/1:25,0:21:42.91:43,0,203	0/0:17,0:18:39.02:0,39,386	0/0:7,0:6:6:0,6,52	0/1:22,0:20:46.49:46,0,176	0/1:20,0:20:18.96:19,0,108	0/0:13,0:13:18:0,18,159	0/0:4,0:7:3.01:0,3,42	0/0:8,0:11:3.01:0,3,43	0/0:16,0:11:12.02:0,12,122	1/1:7,5:13:1.26:25,1,0	1/1:7,0:5:3.01:32,3,0	1/1:7,0:9:0.88:2,1,0	1/1:15,0:11:17.85:165,18,0	0/1:26,0:26:40.40:40,0,217	0/0:17,0:14:3.29:0,3,110	0/1:37,0:33:7.65:250,0,8	1/1:19,0:19:24.92:221,25,0	1/1:9,12:18:35.96:363,36,0	1/1:15,0:15:20.75:198,21,0	1/1:12,0:11:14.53:103,15,0
chr10	76458093	.	T	TA	5451.81	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-13.056;DP=605;FS=0.779;HRun=8;HaplotypeScore=53.7662;InbreedingCoeff=0.9940;MQ=85.54;MQ0=0;MQRankSum=-1.536;QD=28.10;ReadPosRankSum=1.874;VQSLOD=5.3513;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:43.29:0,43,537	0/0:4,0:4:12.01:0,12,110	0/0:29,0:29:52.49:0,52,452	0/0:10,0:10:24.01:0,24,219	1/1:3,19:22:48.11:540,48,0	0/0:23,0:23:51:0,51,463	0/0:23,0:23:57.02:0,57,518	0/0:33,0:33:77.97:0,78,699	0/0:19,0:19:45:0,45,407	0/0:20,0:20:48.02:0,48,439	0/0:15,0:15:39.01:0,39,352	0/0:24,0:24:66.03:0,66,604	0/0:27,0:27:57:0,57,517	0/0:25,0:25:66.03:0,66,604	0/0:28,0:28:84.03:0,84,764	0/0:16,0:16:45.02:0,45,412	0/0:35,0:35:87:0,87,786	1/1:4,16:20:20.68:492,21,0	1/1:3,23:26:69.21:796,69,0	1/1:1,24:25:66.20:761,66,0	1/1:4,23:27:57.17:658,57,0	0/0:21,0:21:57.03:0,57,522	0/0:12,0:12:33.02:0,33,302	0/0:23,0:23:54.01:0,54,494	1/1:1,17:18:51.15:589,51,0	1/1:0,27:27:78.21:888,78,0	1/1:4,11:15:33.10:381,33,0	1/1:0,14:14:30.09:346,30,0
chr10	76458293	.	CTTAT	C	2627.90	PASS	AB=1.000;AC=38;AF=0.760;AN=50;BaseQRankSum=-2.408;DP=333;FS=0.000;HRun=0;HaplotypeScore=64.1610;InbreedingCoeff=0.0970;MQ=62.06;MQ0=1;MQRankSum=-0.468;QD=8.85;ReadPosRankSum=0.422;VQSLOD=2.1703;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:46.84:47,0,458	1/1:6,0:6:3:25,3,0	./.	./.	1/1:5,7:12:8.46:97,8,0	0/1:16,0:16:44.88:45,0,185	0/1:9,0:9:33.94:34,0,41	1/1:31,0:30:47.88:403,48,0	./.	0/0:12,0:12:18.06:0,18,275	0/0:8,1:9:3.01:0,3,49	1/1:1,3:4:9.03:142,9,0	1/1:2,0:2:3:25,3,0	0/1:6,0:6:15.94:16,0,97	0/1:10,0:10:18.93:19,0,43	0/0:5,0:5:6.02:0,6,98	0/1:25,0:25:15.38:15,0,410	1/1:12,18:30:42.14:663,42,0	1/1:19,0:19:8.84:68,9,0	1/1:4,2:6:6.02:95,6,0	1/1:4,3:7:3.01:47,3,0	1/1:3,1:4:3.01:47,3,0	1/1:5,0:5:3:25,3,0	1/1:6,1:7:3.01:47,3,0	1/1:7,9:17:18.05:265,18,0	1/1:10,4:14:21.05:271,21,0	1/1:9,6:15:15.05:237,15,0	1/1:12,9:21:9.03:142,9,0
chr10	76458452	.	AACACACACACAC	A	1203.62	PASS	AB=0.778;AC=15;AF=0.300;AN=50;BaseQRankSum=4.338;DP=390;FS=4.700;HRun=0;HaplotypeScore=118.6091;InbreedingCoeff=0.4932;MQ=67.39;MQ0=8;MQRankSum=-5.583;QD=11.04;ReadPosRankSum=-1.689;VQSLOD=2.0911;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,3:28:3.01:102,3,0	1/1:3,2:5:6.02:204,6,0	./.	./.	0/0:15,0:14:9.01:0,9,146	1/1:6,9:15:6.02:204,6,0	1/1:6,0:6:3.01:84,3,0	0/0:21,0:21:1.55:0,2,4	0/0:14,0:14:18.04:0,18,735	0/0:6,0:6:2.37:0,2,8	1/1:10,3:11:3.01:102,3,0	0/0:11,0:11:15.05:0,15,698	0/0:8,0:8:12.04:0,12,466	0/1:10,3:14:5.94:276,0,6	1/1:6,1:7:3.01:102,3,0	./.	1/1:12,5:17:9.03:274,9,0	0/0:18,0:20:19.30:0,19,267	0/0:9,0:9:3.01:0,3,93	0/0:10,0:10:3.01:0,3,35	0/0:22,0:22:21.90:0,22,471	0/0:7,0:7:6.02:0,6,186	0/0:8,0:8:3.01:0,3,117	0/0:23,0:28:33.11:0,33,1501	0/0:10,0:10:12.04:0,12,232	0/0:12,0:12:6.01:0,6,65	0/0:13,0:13:3.01:0,3,88	0/0:9,0:8:3.01:0,3,90
chr10	76458853	.	A	AAG	975.08	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.430;DP=590;FS=5.532;HRun=0;HaplotypeScore=75.6890;InbreedingCoeff=0.9784;MQ=83.14;MQ0=2;MQRankSum=0.363;QD=39.00;ReadPosRankSum=0.520;VQSLOD=5.6340;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:63.22:1070,63,0	0/0:15,0:15:45.15:0,45,585	0/0:29,0:27:41.21:0,41,680	0/0:28,0:25:53.47:0,53,711	0/0:17,0:17:45.13:0,45,571	0/0:20,0:20:42.14:0,42,540	0/0:20,0:20:57.18:0,57,740	0/0:28,0:28:69.21:0,69,883	0/0:20,0:20:48.10:0,48,591	0/0:22,0:22:63.20:0,63,819	0/0:17,0:17:45.13:0,45,571	0/0:20,0:20:45.12:0,45,557	0/0:16,0:16:42.14:0,42,546	0/0:28,0:28:66.08:0,66,844	0/0:28,0:28:69.21:0,69,882	0/0:23,0:23:66.18:0,66,840	0/0:26,0:26:72.23:0,72,929	0/0:20,0:20:54.17:0,54,699	0/0:25,0:25:69.22:0,69,890	0/0:8,0:8:24.08:0,24,312	0/0:31,0:31:87.27:0,87,1115	0/0:9,0:9:21.07:0,21,273	0/0:16,0:16:48.16:0,48,622	0/0:31,0:31:84.27:0,84,1092	0/0:16,0:16:45.15:0,45,584	0/0:25,0:25:66.18:0,66,829	0/0:20,0:20:44.63:0,45,566	0/0:7,0:7:15.04:0,15,181
chr10	76459046	.	TAAAA	T	2868.68	PASS	AB=0.627;AC=27;AF=0.482;AN=56;BaseQRankSum=5.246;DP=552;FS=1.214;HRun=17;HaplotypeScore=93.3858;InbreedingCoeff=0.5695;MQ=45.81;MQ0=35;MQRankSum=1.269;QD=8.94;ReadPosRankSum=6.622;VQSLOD=-0.4997;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:36:42.14:0,42,309	1/1:1,5:7:14.94:175,15,0	0/0:27,0:3:5.95:0,6,71	0/0:27,0:4:8.06:0,8,116	0/0:11,0:19:1.05:0,1,22	1/1:12,9:18:23.84:286,24,0	1/1:4,10:14:26.93:327,27,0	1/1:16,12:23:32.47:343,32,0	0/0:21,0:20:27.09:0,27,477	1/1:7,12:18:29.84:379,30,0	1/1:4,12:18:26.25:303,26,0	0/0:8,0:8:8.62:0,9,116	0/0:16,0:16:22.58:0,23,325	1/1:8,11:19:11.83:152,12,0	1/1:7,11:17:26.91:331,27,0	1/1:8,5:12:11.81:152,12,0	1/1:10,17:26:35.85:456,36,0	0/1:14,0:21:6.93:13,0,7	0/0:12,0:16:7.02:0,7,68	0/1:8,0:19:1.28:1,0,17	1/1:6,1:11:5.06:43,5,0	0/0:9,0:9:12.04:0,12,198	0/0:12,0:14:27.09:0,27,434	0/0:15,0:13:30.10:0,30,581	0/0:10,0:19:2.50:0,2,59	0/1:6,0:19:5.40:19,0,5	0/1:10,1:27:43.19:43,0,44	0/1:12,1:25:43.16:43,0,44
chr10	76459464	.	TAAA	T	2203.85	PASS	AB=0.636;AC=21;AF=0.375;AN=56;BaseQRankSum=3.119;DP=479;FS=0.489;HRun=16;HaplotypeScore=89.4121;InbreedingCoeff=0.8610;MQ=71.90;MQ0=2;MQRankSum=-2.444;QD=12.38;ReadPosRankSum=3.256;VQSLOD=1.2112;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:35:70.45:422,70,0	0/0:3,0:7:3.74:0,4,9	0/0:26,0:18:23.96:0,24,277	0/0:13,0:12:10.60:0,11,94	1/1:4,8:12:17.55:181,18,0	0/0:2,0:14:12.18:0,12,44	0/1:9,1:21:16.62:17,0,30	0/0:6,1:18:20.22:0,20,122	0/0:15,0:16:24.06:0,24,358	0/0:6,0:16:31.19:0,31,274	0/0:6,0:12:22.11:0,22,187	0/0:11,0:13:36.09:0,36,570	0/0:19,0:21:60.18:0,60,968	0/0:6,0:16:17.65:0,18,84	0/0:5,0:9:6.73:0,7,31	0/0:4,0:12:22.22:0,22,212	0/0:9,0:36:32.72:0,33,168	1/1:1,12:13:26.60:278,27,0	1/1:9,9:20:9.86:266,10,0	1/1:3,11:15:31.15:298,31,0	1/1:3,7:10:16.26:191,16,0	0/0:20,0:22:46.35:0,46,672	0/0:13,0:16:32.72:0,33,535	0/0:29,0:29:84.76:0,85,1462	1/1:3,10:13:17.89:181,18,0	1/1:6,9:15:26.93:290,27,0	1/1:6,10:16:17.92:194,18,0	1/1:4,2:8:11.76:100,12,0
chr10	76459919	.	GGC	G	135.12	PASS	AB=0.889;AC=3;AF=0.060;AN=50;BaseQRankSum=3.688;DP=304;FS=0.000;HRun=0;HaplotypeScore=71.0546;InbreedingCoeff=0.3814;MQ=53.42;MQ0=3;MQRankSum=-1.885;QD=4.50;ReadPosRankSum=0.559;VQSLOD=2.2939;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,17:22:23.75:214,24,0	0/0:3,0:3:6.02:0,6,92	./.	./.	0/0:7,0:7:5.91:0,6,67	0/1:7,1:8:24.01:24,0,184	0/0:13,0:12:21.07:0,21,346	0/0:6,0:6:15.05:0,15,250	0/0:6,0:6:15.05:0,15,253	0/0:11,0:11:24.08:0,24,387	0/0:5,0:5:6.01:0,6,68	0/0:10,0:10:26.92:0,27,418	0/0:5,0:5:9.03:0,9,145	0/0:11,0:11:21.07:0,21,333	0/0:5,0:5:12.04:0,12,198	0/0:5,0:5:12.04:0,12,179	0/0:26,0:26:54.66:0,55,890	0/0:17,0:16:39.12:0,39,633	0/0:15,0:15:30.10:0,30,478	0/0:4,0:4:11.95:0,12,140	0/0:46,0:46:80.76:0,81,1324	0/0:7,0:7:17.99:0,18,245	./.	0/0:24,0:24:54.62:0,55,875	0/0:5,0:5:6.02:0,6,101	0/0:6,0:6:14.78:0,15,177	0/0:14,0:14:32.99:0,33,533	0/0:1,0:1:3.01:0,3,44
chr10	76459933	.	GACACACACACACAC	G	1034.13	PASS	AC=18;AF=0.529;AN=34;BaseQRankSum=3.858;DP=302;FS=0.000;HRun=0;HaplotypeScore=119.5674;InbreedingCoeff=0.5028;MQ=46.63;MQ0=14;MQRankSum=-3.344;QD=7.39;ReadPosRankSum=-0.741;VQSLOD=1.9169;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:3.01:0,3,121	./.	./.	./.	./.	1/1:9,0:9:0.50:43,0,0	1/1:11,4:13:3.01:116,3,0	0/0:9,0:8:0:0,0,0	0/0:10,0:9:3.01:0,3,146	1/1:11,0:11:3.01:98,3,0	./.	0/0:12,0:12:15.03:0,15,395	0/0:6,0:6:9.02:0,9,313	1/1:7,1:10:6.02:214,6,0	./.	1/1:1,2:4:9.03:330,9,0	1/1:20,8:27:5.54:135,6,0	0/0:19,0:16:2.18:0,2,7	./.	./.	1/1:39,0:44:0.47:1,0,0	0/0:7,0:6:6.01:0,6,119	./.	0/0:23,0:26:27.07:0,27,748	1/1:3,0:4:2.99:23,3,0	./.	1/1:9,0:12:5.72:195,6,0	./.
chr10	76460801	.	TGGAGGGAGGGAG	T	104.08	PASS	AB=0.638;AC=1;AF=0.028;AN=36;BaseQRankSum=3.245;DP=203;FS=2.299;HRun=0;HaplotypeScore=62.8721;InbreedingCoeff=-0.0766;MQ=68.63;MQ0=8;MQRankSum=-1.150;QD=2.81;ReadPosRankSum=-0.326;VQSLOD=1.2538;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,21:36:43.16:175,0,43	./.	./.	0/0:25,0:14:0.02:0,0,19	0/0:1,0:1:3.01:0,3,72	./.	0/0:10,0:10:12.03:0,12,269	0/0:6,0:6:9.01:0,9,181	0/0:8,0:8:15.05:0,15,744	./.	0/0:3,0:3:3.01:0,3,135	0/0:12,0:12:14.06:0,14,522	0/0:7,0:7:15.05:0,15,865	0/0:3,0:3:2.04:0,2,6	0/0:4,0:4:6.01:0,6,96	./.	0/0:4,0:4:3.01:0,3,30	./.	0/0:2,0:2:3:0,3,26	./.	0/0:11,0:9:8.99:0,9,139	0/0:4,0:4:3.01:0,3,178	0/0:11,0:10:12.04:0,12,490	0/0:12,0:12:18.41:0,18,987	./.	./.	0/0:6,0:6:6.02:0,6,142	./.
chr10	76460830	.	GGAGA	G	354.78	PASS	AB=0.778;AC=17;AF=0.304;AN=56;BaseQRankSum=4.290;DP=253;FS=8.125;HRun=0;HaplotypeScore=47.6508;InbreedingCoeff=0.6799;MQ=73.50;MQ0=8;MQRankSum=1.315;QD=11.44;ReadPosRankSum=-0.084;VQSLOD=1.1746;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:17.67:0,18,158	0/0:2,0:2:6:0,6,51	0/0:26,0:11:8.06:0,8,131	0/0:41,0:15:1.30:0,1,58	1/1:4,0:4:11.83:89,12,0	0/0:4,0:4:11.93:0,12,93	0/0:8,0:8:20.83:0,21,161	0/0:16,0:16:48.07:0,48,490	0/0:7,0:7:21.04:0,21,432	0/0:3,0:3:9.01:0,9,84	0/0:2,0:2:6.01:0,6,96	0/0:8,0:8:21.02:0,21,347	0/0:13,0:13:39.02:0,39,609	0/0:3,0:3:7.24:0,7,51	0/0:6,0:6:17.98:0,18,150	0/0:5,0:4:12.01:0,12,147	0/0:6,0:6:14.97:0,15,120	1/1:1,2:3:3:26,3,0	1/1:4,0:4:3.16:24,3,0	1/1:3,0:3:8.99:76,9,0	0/1:5,2:7:6.82:69,0,7	0/0:6,0:6:14.99:0,15,180	0/0:10,0:9:20.94:0,21,320	0/0:17,0:17:34.78:0,35,664	1/1:4,0:4:11.97:101,12,0	1/1:2,0:2:5.80:41,6,0	1/1:1,1:2:6:52,6,0	1/1:1,1:2:6:52,6,0
chr10	76460893	.	C	CAG	4498.25	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=6.813;DP=501;FS=6.112;HRun=0;HaplotypeScore=87.7637;InbreedingCoeff=0.9324;MQ=66.05;MQ0=11;MQRankSum=-1.803;QD=29.02;ReadPosRankSum=2.547;VQSLOD=6.1277;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,19:37:65.52:1052,66,0	0/0:3,0:3:9.03:0,9,118	0/0:41,0:12:26.69:0,27,236	0/0:92,0:39:0.55:0,1,74	1/1:2,4:6:15.04:231,15,0	0/0:13,0:13:30.09:0,30,380	0/0:15,0:15:25.82:0,26,357	0/0:19,0:19:39.07:0,39,476	0/0:9,0:9:27.09:0,27,352	0/0:9,0:9:27.09:0,27,355	0/0:8,0:8:15.04:0,15,183	0/0:14,0:14:36.12:0,36,473	0/0:15,0:15:36.12:0,36,471	0/0:11,0:11:33.11:0,33,432	0/0:13,0:13:36.12:0,36,467	0/0:13,0:13:36.10:0,36,457	0/0:17,0:17:42.13:0,42,551	1/1:6,17:23:42.09:634,42,0	1/1:5,3:6:11.99:159,12,0	1/1:3,10:12:21.04:318,21,0	1/1:7,23:30:48.11:767,48,0	0/0:14,0:14:42.14:0,42,551	0/0:11,0:11:21.05:0,21,259	0/0:26,0:26:29.41:0,29,575	1/1:4,6:10:15.05:243,15,0	1/1:3,14:17:45.15:723,45,0	1/1:2,3:5:12.02:178,12,0	1/1:2,3:5:12.04:194,12,0
chr10	76460895	.	G	GAA	2486.94	PASS	AB=0.975;AC=18;AF=0.321;AN=56;BaseQRankSum=10.930;DP=505;FS=5.929;HRun=1;HaplotypeScore=95.4755;InbreedingCoeff=0.6950;MQ=65.88;MQ0=11;MQRankSum=-1.116;QD=14.72;ReadPosRankSum=3.289;VQSLOD=1.0256;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:18.30:515,18,0	0/0:3,0:3:9.03:0,9,138	0/0:45,0:12:10.63:0,11,270	0/0:89,0:38:17.12:0,17,213	0/1:7,0:7:7.03:108,0,7	0/0:13,0:13:33.09:0,33,481	0/0:15,0:15:39.02:0,39,523	0/0:19,0:19:54.11:0,54,717	0/0:9,0:9:27.09:0,27,413	0/0:9,0:9:27.09:0,27,413	0/1:8,0:8:8.94:9,0,210	0/0:13,0:13:36.12:0,36,551	0/0:14,0:14:42.09:0,42,595	0/0:11,0:11:33.11:0,33,505	0/0:13,0:13:36.12:0,36,551	0/0:13,0:13:36.12:0,36,549	0/0:17,0:17:45.08:0,45,660	1/1:18,5:23:42.06:501,42,0	0/1:8,1:7:5.95:133,0,6	1/1:11,2:12:25.33:191,25,0	1/1:31,3:33:34.92:549,35,0	0/0:15,0:15:45.14:0,45,666	0/0:11,0:11:21.07:0,21,319	0/0:24,2:26:31.36:0,31,703	0/1:10,0:10:6.96:107,0,7	1/1:17,1:18:20.87:384,21,0	1/1:5,0:5:8.97:82,9,0	1/1:5,0:5:12:107,12,0
chr10	76460969	.	GAGACAC	G	299.18	PASS	AB=0.849;AC=5;AF=0.089;AN=56;BaseQRankSum=3.313;DP=472;FS=0.000;HRun=0;HaplotypeScore=138.3625;InbreedingCoeff=0.0430;MQ=67.41;MQ0=7;MQRankSum=-1.158;QD=4.47;ReadPosRankSum=-2.002;VQSLOD=2.1533;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,6:17:87.04:87,0,116	0/0:5,0:5:14.08:0,14,415	0/0:43,0:19:33.79:0,34,665	0/0:59,0:26:22.89:0,23,706	0/0:6,1:7:15.05:0,15,422	0/0:14,0:14:25.02:0,25,771	0/0:14,0:14:29.11:0,29,827	0/0:30,0:30:87.30:0,87,2836	0/0:12,0:12:36.11:0,36,1107	0/0:18,0:18:42.14:0,42,1345	0/0:7,0:7:15.05:0,15,382	0/0:18,0:18:45.12:0,45,1451	0/0:14,0:14:39.13:0,39,1311	0/0:10,0:10:24.07:0,24,735	0/0:11,0:11:33.07:0,33,1001	0/0:14,0:14:35.15:0,35,1080	0/0:27,0:27:60.21:0,60,1959	0/1:12,2:15:99:184,0,218	0/0:9,0:7:15.04:0,15,449	0/0:12,2:14:24.23:0,24,747	0/1:15,2:18:27.41:27,0,409	0/0:14,0:14:42.14:0,42,1422	0/0:14,0:14:39.12:0,39,1152	0/0:30,0:30:66.23:0,66,2395	0/1:3,0:2:0:0,0,0	0/1:12,2:13:99:109,0,889	0/0:9,1:10:21.96:0,22,679	0/0:9,0:8:19.10:0,19,425
chr10	76460987	.	C	CAGAG	10333.86	PASS	AB=0.982;AC=40;AF=0.741;AN=54;BaseQRankSum=-5.108;DP=481;FS=8.087;HRun=0;HaplotypeScore=106.7590;InbreedingCoeff=0.7067;MQ=65.37;MQ0=6;MQRankSum=-1.159;QD=28.31;ReadPosRankSum=-1.508;VQSLOD=3.7003;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,10:19:6.99:278,7,0	1/1:0,5:5:12.04:292,12,0	0/0:44,0:19:10.04:0,10,319	0/1:65,0:27:10.43:10,0,247	1/1:4,3:7:9:160,9,0	1/1:1,13:14:18.06:486,18,0	1/1:2,14:16:15.05:405,15,0	1/1:5,31:35:87.24:1915,87,0	0/0:12,0:12:36.12:0,36,662	1/1:1,15:16:39.04:874,39,0	1/1:0,8:8:12.04:269,12,0	0/0:17,0:17:39.13:0,39,725	0/0:15,0:15:39.13:0,39,707	1/1:2,9:12:9.02:242,9,0	1/1:0,10:11:24.08:647,24,0	1/1:0,14:16:30.02:808,30,0	1/1:0,35:36:57.19:1483,57,0	1/1:8,2:10:3.77:170,4,0	1/1:4,2:6:14.99:285,15,0	1/1:4,6:10:14.11:309,14,0	1/1:9,4:13:5.55:137,6,0	0/0:14,0:14:39.13:0,39,735	0/0:13,0:13:36.12:0,36,668	0/1:26,1:27:21.25:21,0,877	./.	1/1:10,6:15:42.06:821,42,0	1/1:6,6:12:23.99:544,24,0	1/1:4,3:6:12.02:177,12,0
chr10	76460994	.	G	GGA	2702.81	PASS	AB=0.841;AC=20;AF=0.357;AN=56;BaseQRankSum=5.195;DP=476;FS=1.081;HRun=0;HaplotypeScore=117.7066;InbreedingCoeff=0.7444;MQ=65.67;MQ0=8;MQRankSum=-5.391;QD=15.71;ReadPosRankSum=-6.009;VQSLOD=2.0638;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,15:22:48.07:717,48,0	0/0:5,0:5:9.03:0,9,114	0/0:49,0:23:2.38:0,2,105	0/1:73,0:27:17.57:18,0,162	1/1:1,5:6:9.03:148,9,0	0/0:12,0:12:24.08:0,24,306	0/0:12,0:12:15:0,15,175	0/0:25,0:24:63.16:0,63,733	0/0:14,0:14:38.99:0,39,478	0/0:14,0:14:30.09:0,30,370	0/0:8,0:8:18.06:0,18,222	0/0:16,0:16:39.13:0,39,501	0/0:16,0:16:45.15:0,45,578	0/0:11,0:11:15.04:0,15,176	0/0:12,0:12:27.08:0,27,336	0/0:17,0:17:39.01:0,39,461	0/0:37,0:37:57.16:0,57,689	1/1:3,3:9:4.82:183,5,0	1/1:3,5:7:12:171,12,0	1/1:2,6:8:18.06:299,18,0	1/1:6,7:13:17.18:252,17,0	0/0:13,0:13:39.11:0,39,488	0/0:15,0:14:32.32:0,32,440	0/0:28,0:28:55.26:0,55,729	1/1:1,0:1:2.74:12,3,0	0/1:8,7:15:8.50:424,0,9	1/1:3,9:12:30.09:477,30,0	1/1:1,4:4:12.04:202,12,0
chr10	76461135	.	CAGAG	C	542.81	PASS	AB=0.942;AC=20;AF=0.385;AN=52;BaseQRankSum=1.295;DP=511;FS=3.270;HRun=0;HaplotypeScore=100.5354;InbreedingCoeff=-0.1052;MQ=60.97;MQ0=20;MQRankSum=-0.963;QD=1.87;ReadPosRankSum=0.185;VQSLOD=1.6562;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:19:1.48:1,0,19	1/1:4,0:4:1.82:39,2,0	./.	0/1:72,0:19:0:0,0,1	1/1:15,0:16:4.66:19,5,0	0/1:11,0:12:14.14:63,0,14	0/0:11,0:10:5.81:0,6,48	0/0:29,0:26:1.82:0,2,5	0/1:13,2:15:71.43:71,0,224	0/0:23,0:23:11.52:0,12,104	0/1:7,0:7:12.76:39,0,13	0/0:18,1:18:9.01:0,9,125	0/0:14,0:14:11.99:0,12,109	0/1:23,0:23:9.35:9,0,70	0/1:15,1:16:28.20:28,0,251	0/1:10,1:15:26.15:26,0,100	0/0:22,0:24:7.82:0,8,67	0/1:16,5:21:21.63:246,0,22	0/0:13,0:11:3:0,3,25	./.	0/1:20,0:20:12.04:12,0,24	0/0:15,0:15:0.47:0,0,1	0/0:14,0:13:3.01:0,3,38	0/0:15,0:15:8.51:0,9,94	1/1:10,0:11:2.83:28,3,0	0/1:20,0:20:12.55:50,0,13	0/1:10,0:10:9.94:22,0,10	1/1:7,0:8:2.68:27,3,0
chr10	76461755	.	A	AAAAAG	2200.62	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-2.286;DP=568;FS=4.972;HRun=0;HaplotypeScore=121.9241;InbreedingCoeff=0.8694;MQ=45.28;MQ0=26;MQRankSum=0.281;QD=8.87;ReadPosRankSum=0.267;VQSLOD=2.4463;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:37:0.33:148,0,0	0/0:8,0:8:15:0,15,164	0/0:8,0:5:4.17:0,4,72	0/0:9,0:3:2.23:0,2,44	1/1:29,0:27:28.66:170,29,0	0/0:18,0:18:41.06:0,41,402	0/0:20,0:20:31.99:0,32,333	0/0:21,0:22:31.41:0,31,374	0/0:19,0:19:42.37:0,42,355	0/0:32,0:30:70.87:0,71,665	0/0:22,0:21:34.82:0,35,373	0/0:26,0:25:57.26:0,57,477	0/0:21,0:20:52.54:0,53,457	0/0:13,0:13:11.95:0,12,153	0/0:22,0:21:44.57:0,45,382	0/0:17,0:17:26.05:0,26,328	0/0:24,0:21:27.38:0,27,397	1/1:21,0:18:26.85:244,27,0	1/1:10,0:17:23.31:218,23,0	1/1:7,0:24:15.71:182,16,0	1/1:6,0:5:14.47:106,14,0	0/0:14,0:14:32.11:0,32,280	0/0:13,0:13:16.97:0,17,180	0/0:12,0:12:11.73:0,12,158	1/1:9,12:20:12.02:236,12,0	1/1:22,0:39:62.71:585,63,0	1/1:24,0:22:38.60:402,39,0	1/1:4,13:18:6.02:117,6,0
chr10	76461756	.	A	AGAAAG	454	PASS	AB=0.856;AC=3;AF=0.054;AN=56;BaseQRankSum=1.734;DP=576;FS=9.725;HRun=0;HaplotypeScore=130.2839;InbreedingCoeff=-0.0310;MQ=46.59;MQ0=26;MQRankSum=-3.507;QD=5.34;ReadPosRankSum=3.542;VQSLOD=1.7547;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,29:39:12.95:500,0,13	0/0:8,0:8:15.03:0,15,170	0/0:9,0:6:7.17:0,7,148	0/0:10,0:4:9.77:0,10,99	0/0:29,0:26:45.10:0,45,390	0/0:19,0:19:44.98:0,45,561	0/0:20,0:20:43.67:0,44,596	0/0:23,0:23:44.17:0,44,593	0/0:19,0:19:48.02:0,48,641	0/0:32,0:30:74.72:0,75,1072	0/0:23,0:22:51.90:0,52,557	0/0:26,0:25:67.64:0,68,920	0/0:21,0:20:57.13:0,57,849	0/0:13,0:13:21.42:0,21,258	0/0:23,0:22:42.13:0,42,640	0/0:17,0:17:34.34:0,34,480	0/0:24,0:21:44.48:0,44,566	0/0:22,0:18:11.23:0,11,270	0/0:19,0:18:41.60:0,42,334	0/0:25,0:24:23.74:0,24,178	0/0:6,0:5:15.02:0,15,142	0/0:14,0:14:36.01:0,36,468	0/0:13,0:13:32.40:0,32,343	0/0:12,0:12:19.95:0,20,306	0/1:24,0:20:41.70:42,0,84	0/0:40,0:39:94.59:0,95,640	0/0:24,0:22:38.24:0,38,367	0/1:19,0:18:7.01:7,0,33
chr10	76462097	.	C	CT	12579.70	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-12.366;DP=706;FS=18.412;HRun=9;HaplotypeScore=73.2232;InbreedingCoeff=0.9768;MQ=75.68;MQ0=0;MQRankSum=-2.496;QD=24.24;ReadPosRankSum=-1.397;VQSLOD=3.3390;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,48:55:99:1412,109,0	1/1:1,9:10:21.06:232,21,0	0/0:13,0:13:18.69:0,19,158	0/0:14,0:15:17.10:0,17,203	1/1:3,16:18:42.34:383,42,0	1/1:3,20:24:56.99:610,57,0	1/1:6,25:32:48.98:751,49,0	1/1:8,27:35:58.02:825,58,0	0/0:29,1:32:48.82:0,49,625	1/1:8,23:32:48.99:751,49,0	1/1:3,19:22:52.02:564,52,0	0/0:32,0:32:92.98:0,93,807	0/0:28,0:28:59.64:0,60,505	1/1:5,23:28:63.17:697,63,0	1/1:0,23:23:57.15:631,57,0	1/1:0,23:23:63.17:697,63,0	1/1:6,20:26:8.06:545,8,0	1/1:3,12:15:10.04:339,10,0	1/1:5,15:20:48.11:522,48,0	1/1:3,18:21:30.91:505,31,0	1/1:7,20:28:51.43:538,51,0	0/0:23,0:23:56.98:0,57,495	0/0:15,0:15:41.98:0,42,364	0/0:29,0:29:77.93:0,78,670	1/1:1,27:28:60.16:662,60,0	1/1:2,24:26:46.11:720,46,0	1/1:2,32:34:60.16:664,60,0	1/1:0,18:18:48.13:531,48,0
chr10	76462548	.	ATTC	A	3098.60	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-0.998;DP=555;FS=0.423;HRun=0;HaplotypeScore=94.3882;InbreedingCoeff=0.9794;MQ=77.18;MQ0=2;MQRankSum=-3.300;QD=18.55;ReadPosRankSum=1.027;VQSLOD=3.2425;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:71.97:0,72,1061	0/0:5,0:6:11.95:0,12,143	0/0:25,0:14:10.34:0,10,162	0/0:23,0:20:17.71:0,18,189	1/1:13,2:15:31.82:326,32,0	0/0:25,0:25:30.06:0,30,357	0/0:26,0:26:45.07:0,45,538	0/0:29,0:29:72.62:0,73,782	0/0:20,0:20:36.98:0,37,637	0/0:22,0:22:54.40:0,54,582	0/0:14,0:14:35.70:0,36,399	0/0:13,0:13:27:0,27,405	0/0:11,0:10:16.15:0,16,212	0/0:23,0:23:19.44:0,19,236	0/0:18,0:18:33.07:0,33,404	0/0:17,0:17:21.05:0,21,268	0/0:18,0:18:24.02:0,24,265	1/1:3,10:13:15.02:199,15,0	1/1:5,6:11:23.96:245,24,0	1/1:17,1:18:43.63:381,44,0	1/1:24,4:28:55.10:530,55,0	0/0:22,0:22:57.06:0,57,730	0/0:23,0:23:56.48:0,56,841	0/0:21,0:21:39.08:0,39,558	1/1:15,4:19:26.90:304,27,0	1/1:8,14:22:47.94:487,48,0	1/1:18,5:23:45.91:514,46,0	1/1:6,12:18:24.06:326,24,0
chr10	76462551	.	CTTCT	C	1949.46	PASS	AB=0.876;AC=14;AF=0.250;AN=56;BaseQRankSum=2.105;DP=552;FS=0.904;HRun=0;HaplotypeScore=104.9334;InbreedingCoeff=0.6789;MQ=71.01;MQ0=2;MQRankSum=-1.308;QD=11.96;ReadPosRankSum=2.567;VQSLOD=3.2699;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:74.36:0,74,1320	0/0:7,0:6:11.96:0,12,189	0/0:26,0:12:18.90:0,19,225	0/0:20,0:15:27.73:0,28,263	1/1:14,3:17:27:301,27,0	0/0:24,0:24:30.08:0,30,473	0/0:25,0:25:45.09:0,45,703	0/0:31,0:31:78.24:0,78,982	0/0:19,0:19:44.12:0,44,795	0/0:24,0:24:59.73:0,60,743	0/0:15,0:15:35.80:0,36,491	0/0:13,0:13:30.91:0,31,513	0/0:10,0:9:17.12:0,17,259	0/0:24,0:24:22:0,22,308	0/0:19,0:19:33.08:0,33,520	0/0:17,0:17:24.03:0,24,371	0/0:20,0:20:23.79:0,24,353	0/1:13,0:13:26.50:94,0,27	1/1:11,0:11:10.31:145,10,0	1/1:18,0:19:10.83:250,11,0	1/1:21,2:23:33.88:455,34,0	0/0:21,0:21:60.02:0,60,884	0/0:22,0:22:56.96:0,57,1053	0/0:21,0:21:48.56:0,49,792	0/1:9,8:17:2.56:215,0,3	0/1:19,1:21:13.87:257,0,14	1/1:21,1:22:17.99:281,18,0	0/1:18,1:20:1.68:131,0,2
chr10	76462552	.	TTC	T	2958.04	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-0.019;DP=550;FS=0.000;HRun=0;HaplotypeScore=85.1132;InbreedingCoeff=0.9498;MQ=70.11;MQ0=2;MQRankSum=-4.873;QD=18.37;ReadPosRankSum=-1.457;VQSLOD=3.4023;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:54.32:0,54,828	0/0:8,0:7:11.94:0,12,113	0/0:25,0:12:11.61:0,12,125	0/0:19,0:14:19.09:0,19,176	1/1:15,1:16:34.35:306,34,0	0/0:24,0:24:29.82:0,30,269	0/0:24,0:24:44.85:0,45,422	0/0:30,0:30:77.83:0,78,696	0/0:19,0:19:44.56:0,45,509	0/0:24,0:24:61.36:0,61,509	0/0:15,0:15:35.62:0,36,324	0/0:13,0:13:26.14:0,26,323	0/0:10,0:9:15.14:0,15,155	0/0:24,0:24:19.13:0,19,179	0/0:19,0:19:33.01:0,33,301	0/0:16,0:16:16.46:0,16,187	0/0:20,0:20:23.28:0,23,199	1/1:12,1:13:2.24:153,2,0	1/1:9,2:11:29.66:271,30,0	1/1:17,3:20:32.97:416,33,0	1/1:22,1:23:59.79:563,60,0	0/0:22,0:22:55.89:0,56,597	0/0:22,0:22:47.29:0,47,652	0/0:21,0:21:44.21:0,44,487	1/1:16,0:16:33.84:302,34,0	1/1:20,1:21:49.35:431,49,0	1/1:18,3:21:49.44:451,49,0	1/1:18,2:20:16.27:274,16,0
chr10	76462553	.	TC	T	2620.41	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=1.473;DP=573;FS=2.895;HRun=1;HaplotypeScore=91.3802;InbreedingCoeff=0.9049;MQ=67.70;MQ0=2;MQRankSum=-5.423;QD=13.10;ReadPosRankSum=-2.484;VQSLOD=1.7563;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:32.81:0,33,643	0/0:9,0:8:8.93:0,9,87	0/1:24,0:10:1.73:2,0,97	0/0:20,0:15:17.31:0,17,161	1/1:17,1:18:36.34:289,36,0	0/0:24,0:24:28.42:0,28,224	0/0:23,0:23:42.15:0,42,332	0/0:30,0:30:78.29:0,78,629	0/0:22,0:22:47.39:0,47,427	0/0:24,0:24:61.21:0,61,469	0/0:15,0:15:34.94:0,35,234	0/0:13,0:13:24.52:0,25,252	0/0:9,0:8:14.60:0,15,122	0/0:25,0:25:18.47:0,18,146	0/0:19,0:19:32.32:0,32,250	0/0:15,0:15:23.24:0,23,174	0/0:20,0:20:19.87:0,20,153	1/1:16,1:17:2.65:116,3,0	1/1:11,0:11:24.26:214,24,0	1/1:20,1:21:31.91:381,32,0	1/1:24,0:24:58.72:509,59,0	0/0:24,0:24:57.72:0,58,504	0/0:23,0:23:25.76:0,26,485	0/0:22,0:22:42.35:0,42,373	1/1:18,1:19:33.29:248,33,0	1/1:20,1:21:51.68:407,52,0	1/1:24,0:24:52.30:431,52,0	1/1:20,1:21:17.55:230,18,0
chr10	76462554	.	C	CT	710.62	PASS	AB=0.934;AC=27;AF=0.482;AN=56;BaseQRankSum=-3.130;DP=587;FS=4.298;HRun=16;HaplotypeScore=106.2022;InbreedingCoeff=0.3802;MQ=67.39;MQ0=2;MQRankSum=1.837;QD=1.98;ReadPosRankSum=-1.607;VQSLOD=-0.0394;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:37,1:38:42.63:43,0,58	1/1:10,0:9:2.40:18,2,0	0/0:24,0:10:7.23:0,7,39	0/0:21,0:15:6.42:0,6,47	0/0:19,0:19:9.17:0,9,40	1/1:24,0:25:17.80:84,18,0	1/1:24,0:24:35:145,35,0	1/1:28,0:28:16.09:102,16,0	0/1:19,2:22:4.94:5,0,55	1/1:23,1:24:7.97:73,8,0	1/1:15,0:16:17.58:82,18,0	0/1:12,2:14:10.22:10,0,52	0/0:8,0:7:2.03:0,2,15	1/1:25,0:26:7.98:41,8,0	1/1:17,0:18:24.39:105,24,0	1/1:16,0:16:18.60:80,19,0	1/1:20,0:21:6.62:44,7,0	0/0:17,0:17:12.34:0,12,48	0/1:11,0:11:7.39:24,0,7	0/0:21,0:21:6.76:0,7,32	0/0:23,0:23:1.30:0,1,22	0/0:24,0:24:7.41:0,7,72	0/0:24,0:24:7.58:0,8,87	0/1:15,7:24:0.21:0,0,86	0/1:19,0:19:17.95:31,0,18	0/1:23,0:23:3.44:3,0,26	0/0:25,0:25:15.56:0,16,52	0/0:22,0:22:4.31:0,4,51
chr10	76462555	.	T	TTC	3196.62	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-10.520;DP=593;FS=1.951;HRun=0;HaplotypeScore=109.8580;InbreedingCoeff=0.9542;MQ=65.53;MQ0=2;MQRankSum=5.075;QD=15.01;ReadPosRankSum=4.849;VQSLOD=3.8056;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:75.70:0,76,713	1/1:4,7:10:9.92:118,10,0	0/0:23,0:9:7.99:0,8,138	0/0:20,0:14:11.36:0,11,174	0/0:19,0:19:41.48:0,41,289	1/1:4,21:25:26.30:343,26,0	1/1:6,17:23:38.74:493,39,0	1/1:3,25:29:27.20:664,27,0	0/0:22,0:22:49.69:0,50,472	1/1:4,20:26:31.76:548,32,0	1/1:4,12:18:23.59:250,24,0	0/0:14,0:14:28.15:0,28,293	0/0:8,0:7:18.90:0,19,181	1/1:9,17:26:10.96:185,11,0	1/1:2,14:17:7.27:358,7,0	1/1:5,12:17:19.67:248,20,0	1/1:6,14:21:17.30:206,17,0	0/0:18,0:18:30.86:0,31,203	0/0:11,0:11:26.34:0,26,177	0/0:21,0:21:55.69:0,56,404	0/0:23,0:22:56.64:0,57,418	0/0:22,0:22:44.99:0,45,465	0/0:25,0:25:61.88:0,62,604	0/0:24,0:24:48.43:0,48,486	0/0:19,0:19:35.27:0,35,212	0/0:25,0:25:54.99:0,55,407	0/0:26,0:26:60.22:0,60,423	0/0:22,0:22:30.25:0,30,209
chr10	76462556	.	T	TC	1585.03	PASS	AB=0.972;AC=13;AF=0.232;AN=56;BaseQRankSum=-4.044;DP=587;FS=1.881;HRun=0;HaplotypeScore=97.7867;InbreedingCoeff=0.2834;MQ=65.27;MQ0=3;MQRankSum=3.905;QD=7.69;ReadPosRankSum=5.961;VQSLOD=3.6095;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:80.75:0,81,719	0/1:11,0:10:25.11:40,0,25	0/0:23,0:9:6.39:0,6,119	0/0:21,0:14:15.47:0,15,184	0/0:19,0:19:44.62:0,45,302	1/1:22,1:23:5.95:162,6,0	0/1:19,4:23:1.57:266,0,2	0/1:26,0:26:30.09:369,0,30	0/0:22,0:22:49.94:0,50,459	0/1:25,0:25:4.95:344,0,5	0/1:16,0:16:29.52:120,0,30	0/0:13,0:13:27.72:0,28,293	0/0:8,0:7:19.83:0,20,180	0/1:27,0:26:40.29:64,0,40	1/1:17,0:17:1.83:129,2,0	1/1:15,2:17:0.49:131,0,0	0/1:20,1:21:1.66:108,0,2	0/0:18,0:18:31.89:0,32,226	0/0:13,0:13:22.47:0,22,166	0/0:21,0:21:57.63:0,58,448	0/0:23,0:22:55.59:0,56,409	0/0:20,0:20:50.92:0,51,505	0/0:25,0:25:71.98:0,72,669	0/0:25,0:25:50.31:0,50,507	0/0:19,0:19:28.48:0,28,189	0/0:25,0:25:44.24:0,44,421	0/0:26,0:26:70.44:0,70,495	0/0:22,0:22:37.12:0,37,252
chr10	76465271	.	CT	C	1882.02	PASS	AB=0.833;AC=24;AF=0.429;AN=56;BaseQRankSum=-3.013;DP=552;FS=5.429;HRun=14;HaplotypeScore=75.1824;InbreedingCoeff=0.7411;MQ=70.12;MQ0=1;MQRankSum=3.087;QD=7.08;ReadPosRankSum=7.494;VQSLOD=2.4220;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,18:38:19.74:375,20,0	1/1:2,5:8:13.93:88,14,0	0/0:21,0:14:17.76:0,18,137	0/1:10,1:9:29.08:29,0,36	0/0:4,0:15:25.90:0,26,143	1/1:3,11:15:12.32:146,12,0	1/1:4,14:19:25.77:170,26,0	1/1:22,10:33:0.68:142,1,0	0/1:8,3:12:24.60:25,0,108	1/1:13,9:23:0.78:142,1,0	1/1:4,13:20:37.05:226,37,0	0/0:26,1:27:27.36:0,27,368	0/0:16,2:18:21.39:0,21,315	1/1:9,4:16:26.84:157,27,0	1/1:11,14:26:10.82:187,11,0	1/1:5,18:24:6.90:184,7,0	1/1:3,15:20:33.75:217,34,0	0/0:9,0:27:42.49:0,42,217	0/0:19,0:23:23.41:0,23,157	0/0:7,0:14:17.38:0,17,100	0/0:7,0:19:11.95:0,12,63	0/0:15,0:15:29.96:0,30,262	0/0:20,0:20:33.43:0,33,287	0/0:18,0:19:44.86:0,45,393	0/0:9,0:16:26.07:0,26,147	0/0:14,0:24:49.32:0,49,309	0/0:8,0:22:23.22:0,23,136	0/0:2,0:5:8.62:0,9,46
chr10	76465539	.	CA	C	4426.13	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.432;DP=624;FS=0.721;HRun=7;HaplotypeScore=93.2901;InbreedingCoeff=0.9700;MQ=62.80;MQ0=3;MQRankSum=-12.028;QD=24.06;ReadPosRankSum=-2.817;VQSLOD=3.5904;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:81.21:0,81,976	0/0:1,0:1:3.01:0,3,38	0/0:27,0:15:19.35:0,19,222	0/0:27,0:24:45.72:0,46,501	1/1:5,24:29:75.14:754,75,0	0/0:32,0:32:90.28:0,90,1115	0/0:23,0:23:63.19:0,63,780	0/0:40,0:40:99:0,102,1270	0/0:17,0:17:48.15:0,48,603	0/0:17,0:17:42.13:0,42,517	0/0:22,0:22:66.19:0,66,803	0/0:15,0:15:36.12:0,36,452	0/0:12,0:12:36.10:0,36,439	0/0:22,0:22:66.20:0,66,815	0/0:24,0:24:63.20:0,63,792	0/0:22,0:21:57.18:0,57,715	0/0:22,1:23:35.73:0,36,749	1/1:1,10:10:30.07:306,30,0	1/1:7,15:22:54.03:528,54,0	1/1:9,22:31:72.14:725,72,0	1/1:7,8:14:18.03:182,18,0	0/0:16,0:15:45.14:0,45,564	0/0:28,0:28:78.25:0,78,981	0/0:34,0:34:93.24:0,93,1138	1/1:7,14:21:54.06:523,54,0	1/1:3,20:23:60.12:607,60,0	1/1:6,19:25:60.10:598,60,0	1/1:1,6:7:21.02:204,21,0
chr10	76465558	.	A	AAAC	10039.67	PASS	AB=0.955;AC=21;AF=0.375;AN=56;BaseQRankSum=7.996;DP=628;FS=0.691;HRun=0;HaplotypeScore=102.9087;InbreedingCoeff=0.9277;MQ=61.85;MQ0=4;MQRankSum=-12.109;QD=43.09;ReadPosRankSum=1.163;VQSLOD=6.3925;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,27:36:57.19:1228,57,0	0/0:2,0:2:6.01:0,6,69	0/0:30,0:20:10.66:0,11,609	0/0:29,0:24:35.64:0,36,660	1/1:5,21:26:66.21:1367,66,0	0/0:32,0:32:78.25:0,78,1218	0/0:28,0:28:75.23:0,75,1127	0/0:45,0:45:99:0,120,1819	0/0:18,0:18:54.17:0,54,832	0/0:15,0:15:42.14:0,42,669	0/0:22,0:22:63.21:0,63,987	0/0:13,0:13:36.12:0,36,566	0/0:10,0:10:30.08:0,30,452	0/0:22,0:22:60.17:0,60,912	0/0:27,0:27:66.22:0,66,1042	0/0:24,0:23:60.20:0,60,938	0/1:20,1:21:2.80:3,0,862	1/1:6,7:12:30.10:572,30,0	1/1:10,12:23:57.16:993,57,0	1/1:8,19:27:81.27:1602,81,0	1/1:6,7:15:27.09:497,27,0	0/0:16,0:15:42.12:0,42,631	0/0:29,0:29:81.22:0,81,1205	0/0:33,0:33:93.31:0,93,1465	1/1:7,11:19:45.15:866,45,0	1/1:4,21:26:66.21:1381,66,0	1/1:5,14:20:54.18:1068,54,0	1/1:0,7:7:21.07:463,21,0
chr10	76465724	.	A	AACACACACACACAC	11329.21	PASS	AC=40;AF=0.741;AN=54;BaseQRankSum=0.547;DP=664;FS=7.916;HRun=0;HaplotypeScore=238.5726;InbreedingCoeff=0.7815;MQ=54.31;MQ0=17;MQRankSum=-9.323;QD=27.10;ReadPosRankSum=-4.828;VQSLOD=1.6192;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:31:20.86:690,21,0	1/1:4,3:7:8.35:543,8,0	./.	0/0:65,0:12:3.09:0,3,133	1/1:17,0:20:6.02:290,6,0	1/1:18,3:23:9.03:526,9,0	1/1:21,0:22:5.17:89,5,0	1/1:40,0:39:30.08:680,30,0	0/0:18,0:19:29.74:0,30,962	1/1:22,0:22:24.08:1120,24,0	1/1:19,1:24:6.02:308,6,0	0/0:14,0:18:30.09:0,30,1042	0/0:13,0:13:21.07:0,21,741	1/1:17,1:20:9.03:429,9,0	1/1:19,2:21:12.04:753,12,0	1/1:19,4:24:30.10:1495,30,0	1/1:19,2:25:30.85:1426,31,0	1/1:9,0:9:3.01:147,3,0	1/1:14,0:16:15.03:506,15,0	1/1:17,0:19:5.87:256,6,0	1/1:19,0:19:8.86:90,9,0	0/0:19,0:20:41.83:0,42,1428	0/0:14,0:17:29.63:0,30,905	0/0:24,0:28:62.88:0,63,2259	1/1:20,0:22:9.03:412,9,0	1/1:18,0:19:18.06:713,18,0	1/1:14,0:18:15.05:572,15,0	1/1:6,0:9:6.02:285,6,0
chr10	76465744	.	C	CACACACACAG	3636.49	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=6.414;DP=679;FS=14.236;HRun=0;HaplotypeScore=181.1659;InbreedingCoeff=-0.3287;MQ=45.97;MQ0=24;MQRankSum=-6.836;QD=9.80;ReadPosRankSum=5.930;VQSLOD=1.4538;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,29:40:17.93:668,18,0	0/1:7,0:7:15.33:215,0,15	0/0:61,0:12:20.94:0,21,191	0/0:60,0:11:1:0,1,288	0/1:24,0:23:99:173,0,182	0/1:27,0:26:99:205,0,123	0/1:21,0:21:19.35:19,0,96	0/0:28,0:27:33.04:0,33,353	0/0:20,0:20:44.93:0,45,971	0/0:22,0:22:33.97:0,34,325	0/1:23,0:22:38.40:51,0,38	0/0:19,0:19:45.07:0,45,980	0/0:17,0:17:47.99:0,48,843	0/1:21,0:20:75.85:98,0,76	0/1:22,0:22:78.80:209,0,79	0/1:25,0:24:99:632,0,156	0/1:23,0:23:69.79:352,0,70	0/0:7,0:7:8.90:0,9,60	0/1:23,0:21:65.27:65,0,271	0/1:19,0:19:36.02:36,0,63	0/1:16,0:15:11.28:11,0,20	0/0:25,0:24:60.08:0,60,1394	0/0:19,0:19:44.97:0,45,924	0/0:30,0:30:78.19:0,78,1966	0/1:24,0:23:81.78:204,0,82	0/1:25,0:23:99:179,0,316	0/1:16,0:16:99:320,0,153	0/1:14,0:14:99:198,0,127
chr10	76466212	.	CTGAG	C	10390.14	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.757;DP=693;FS=0.656;HRun=0;HaplotypeScore=131.1099;InbreedingCoeff=0.9971;MQ=83.84;MQ0=0;MQRankSum=-7.448;QD=45.17;ReadPosRankSum=3.006;VQSLOD=5.6175;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,151,4096	1/1:0,8:8:24.08:465,24,0	0/0:27,0:27:74.70:0,75,1787	0/0:20,0:21:51.17:0,51,1263	0/0:24,0:24:48.16:0,48,1310	1/1:1,17:18:42.14:814,42,0	1/1:3,34:37:84.22:1627,84,0	1/1:2,22:24:60.08:1008,60,0	0/0:30,0:30:84.29:0,84,2269	1/1:0,15:15:39.11:712,39,0	1/1:0,16:16:36.12:697,36,0	0/0:33,0:33:96.32:0,96,2543	0/0:16,0:16:48.14:0,48,1254	1/1:1,16:17:42.14:814,42,0	1/1:3,37:40:84.29:1628,84,0	1/1:0,29:29:75.13:1453,75,0	1/1:4,22:26:63.21:1173,63,0	0/0:31,0:31:93.28:0,93,2454	0/0:13,0:13:36.12:0,36,984	0/0:12,0:12:30.10:0,30,813	0/0:45,0:45:99:0,129,3503	0/0:16,0:16:45.15:0,45,1233	0/0:11,0:11:30.10:0,30,819	0/0:48,0:48:99:0,141,3795	0/0:24,0:24:57.19:0,57,1561	0/0:30,0:30:78.27:0,78,2087	0/0:24,0:24:69.22:0,69,1829	0/0:5,0:5:15.05:0,15,409
chr10	76466557	.	AGTTT	A	8940.84	PASS	AB=0.785;AC=38;AF=0.679;AN=56;BaseQRankSum=16.047;DP=765;FS=0.743;HRun=0;HaplotypeScore=186.8487;InbreedingCoeff=0.8046;MQ=64.29;MQ0=2;MQRankSum=-8.789;QD=18.32;ReadPosRankSum=0.479;VQSLOD=4.0761;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,135,3064	1/1:4,6:10:15.05:239,15,0	0/0:24,0:20:13.28:0,13,291	0/1:32,1:30:35.86:36,0,162	1/1:4,0:24:48.05:446,48,0	1/1:14,8:21:21.07:335,21,0	1/1:7,18:26:45.15:698,45,0	1/1:17,4:21:12.04:192,12,0	0/0:25,0:25:51.18:0,51,1222	1/1:11,16:27:48.10:692,48,0	1/1:8,13:21:39.13:623,39,0	0/0:35,0:35:54.17:0,54,1224	0/0:41,0:41:87.30:0,87,2073	1/1:7,9:16:21.07:335,21,0	1/1:11,30:41:87.30:1389,87,0	0/1:12,24:36:6.59:939,0,7	1/1:12,26:38:6.93:992,7,0	1/1:14,0:18:17.98:160,18,0	1/1:21,0:29:21.02:196,21,0	1/1:6,0:19:30.03:276,30,0	1/1:11,0:19:8.14:82,8,0	0/0:35,0:35:81.28:0,81,1935	0/0:28,0:28:54.19:0,54,1281	0/0:28,0:28:60.21:0,60,1414	1/1:5,0:15:30.03:280,30,0	1/1:14,0:27:39.04:363,39,0	1/1:15,0:38:63.07:584,63,0	1/1:3,0:6:9.01:84,9,0
chr10	76467696	.	G	GC	1037.37	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.632;DP=654;FS=5.700;HRun=6;HaplotypeScore=63.0624;InbreedingCoeff=0.9914;MQ=90.64;MQ0=0;MQRankSum=-3.744;QD=25.93;ReadPosRankSum=1.257;VQSLOD=3.8700;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,33:40:90.29:1132,90,0	0/0:8,0:8:24.05:0,24,245	0/0:27,0:27:66.02:0,66,647	0/0:23,0:23:52.03:0,52,507	0/0:10,0:10:30.07:0,30,306	0/0:18,0:18:54.12:0,54,551	0/0:32,0:32:87.19:0,87,888	0/0:20,0:20:39.07:0,39,388	0/0:14,0:14:30.07:0,30,306	0/0:18,0:18:48.11:0,48,490	0/0:11,0:11:30.07:0,30,306	0/0:28,0:28:81.18:0,81,826	0/0:18,0:18:51.12:0,51,520	0/0:23,0:23:60.13:0,60,612	0/0:26,0:26:72.14:0,72,727	0/0:16,0:16:42.09:0,42,429	0/0:36,0:36:99:0,99,1004	0/0:45,0:45:99:0,123,1245	0/0:15,0:15:39.09:0,39,398	0/0:11,0:11:30.07:0,30,306	0/0:71,0:71:99:0,198,1995	0/0:13,0:13:33.07:0,33,337	0/0:12,0:12:36.08:0,36,367	0/0:40,0:40:99:0,108,1096	0/0:23,0:23:57.13:0,57,581	0/0:30,0:30:84.18:0,84,857	0/0:18,0:18:51.09:0,51,512	0/0:8,0:8:21.05:0,21,214
chr10	76475617	.	ATGTGTGTGTGTGTGTG	A	839.28	PASS	AB=0.970;AC=18;AF=0.346;AN=52;BaseQRankSum=2.685;DP=613;FS=11.240;HRun=0;HaplotypeScore=218.9130;InbreedingCoeff=0.5290;MQ=55.74;MQ0=24;MQRankSum=-0.720;QD=4.05;ReadPosRankSum=-1.186;VQSLOD=1.3628;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:65.23:65,0,97	0/0:14,0:14:21.07:0,21,609	./.	./.	1/1:13,4:16:3.48:52,3,0	0/0:22,0:23:27.56:0,28,769	0/0:24,0:23:21.54:0,22,569	0/0:24,0:23:11.77:0,12,146	0/0:24,0:24:28.02:0,28,1105	0/0:30,0:27:45.10:0,45,1163	0/0:18,0:18:21.05:0,21,484	0/0:18,0:17:27.08:0,27,1177	0/0:11,0:11:8.99:0,9,280	0/0:13,0:13:9.50:0,10,411	0/0:16,0:16:30.55:0,31,791	0/0:21,0:23:37.01:0,37,1110	0/0:27,0:37:50.85:0,51,1063	0/1:29,2:28:13.02:297,0,13	1/1:18,1:19:2.53:130,3,0	1/1:18,0:18:3:39,3,0	1/1:29,0:29:2.63:26,3,0	0/0:15,0:15:9.97:0,10,346	0/0:18,0:16:24.08:0,24,1179	0/0:25,0:27:51.16:0,51,2358	1/1:12,6:18:3.01:131,3,0	1/1:27,0:26:1.97:81,2,0	1/1:18,0:18:1.93:42,2,0	1/1:2,1:3:3.01:131,3,0
chr10	76476545	.	T	TAA	6030.13	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-2.957;DP=593;FS=0.000;HRun=10;HaplotypeScore=74.5773;InbreedingCoeff=0.9898;MQ=64.30;MQ0=2;MQRankSum=1.492;QD=25.13;ReadPosRankSum=0.713;VQSLOD=4.6579;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:53:72.06:319,72,0	0/0:8,0:8:21.03:0,21,207	0/0:20,0:15:35.40:0,35,316	0/0:11,0:8:8.94:0,9,91	1/1:5,28:34:84.08:1106,84,0	0/0:20,0:20:51.10:0,51,519	0/0:13,0:13:33.07:0,33,336	0/0:29,0:30:71.59:0,72,685	0/0:15,0:15:42.07:0,42,418	0/0:22,0:22:48.07:0,48,484	0/0:15,0:15:42.07:0,42,420	0/0:20,0:20:48.06:0,48,481	0/0:19,0:19:38.97:0,39,383	0/0:23,0:24:62.86:0,63,619	0/0:22,0:22:57.10:0,57,570	0/0:22,0:22:57.11:0,57,579	0/0:34,0:34:90.10:0,90,893	1/1:6,23:30:44.12:599,44,0	1/1:1,10:13:33.05:431,33,0	1/1:4,14:18:42.11:589,42,0	1/1:0,9:10:20.74:279,21,0	0/0:15,0:15:45.06:0,45,442	0/0:19,0:19:57.12:0,57,573	0/0:23,0:23:65.82:0,66,631	1/1:10,7:18:41.67:540,42,0	1/1:2,18:21:53.08:651,53,0	1/1:7,16:23:60.20:888,60,0	1/1:2,17:19:42.14:627,42,0
chr10	76477740	.	G	GGT	685.50	PASS	AB=0.950;AC=19;AF=0.413;AN=46;BaseQRankSum=-3.948;DP=610;FS=21.169;HRun=0;HaplotypeScore=100.3574;InbreedingCoeff=-0.0763;MQ=69.04;MQ0=18;MQRankSum=0.911;QD=1.86;ReadPosRankSum=1.165;VQSLOD=0.5664;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:5,0:5:3.01:0,3,32	./.	./.	0/0:11,0:11:0:0,0,0	0/1:18,0:17:22.61:61,0,23	0/1:37,0:37:36.33:56,0,36	0/1:26,0:25:0:0,0,0	0/0:19,0:19:8.83:0,9,72	1/1:20,0:18:3.48:42,3,0	./.	0/1:27,0:27:11.63:51,0,12	1/1:14,0:13:8.80:56,9,0	0/0:20,0:22:8.18:0,8,36	0/0:4,0:5:2.74:0,3,12	0/0:6,0:12:7.31:0,7,50	0/0:16,0:24:10.89:0,11,84	0/1:27,0:27:20.09:64,0,20	0/0:31,0:31:1.73:0,2,5	1/1:7,0:6:3.01:35,3,0	1/1:60,0:59:13.08:91,13,0	0/1:13,0:17:8.18:10,0,8	0/1:10,4:15:22.88:79,0,23	0/1:29,19:49:99:190,0,121	0/1:16,0:16:23.13:45,0,23	0/1:17,0:16:3.02:25,0,3	./.	0/1:16,0:14:16.46:16,0,33
chr10	76477777	.	GTGTGTGTGTGTGTCTGTGTGTC	G	31.77	PASS	AB=0.898;AC=6;AF=0.107;AN=56;BaseQRankSum=-0.321;DP=609;FS=0.925;HRun=0;HaplotypeScore=269.1839;InbreedingCoeff=-0.0077;MQ=51.79;MQ0=29;MQRankSum=-1.999;QD=0.33;ReadPosRankSum=-3.155;VQSLOD=1.9910;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,22:30:39.11:79,0,39	0/0:3,0:3:3.01:0,3,162	0/0:10,0:3:6.02:0,6,83	0/0:16,0:4:0.78:0,1,11	1/1:11,0:12:0.89:2,1,0	0/0:19,0:17:1.80:0,2,1090	0/0:31,0:31:33.11:0,33,1194	0/0:23,0:21:7.85:0,8,553	0/0:22,0:20:42.20:0,42,1997	0/1:18,0:17:29.85:30,0,746	0/0:20,0:20:36.12:0,36,1481	0/1:24,0:24:17.04:17,0,1784	0/0:19,0:17:35.94:0,36,1298	0/0:16,0:15:27.54:0,28,1110	0/0:12,0:12:24.08:0,24,1149	0/0:25,0:24:60.21:0,60,3219	0/0:33,0:31:50.51:0,51,2189	0/0:18,0:18:36.91:0,37,697	0/0:19,0:19:31.85:0,32,754	0/0:10,0:8:12.04:0,12,238	0/0:66,0:61:72.57:0,73,2336	0/0:20,0:19:25.81:0,26,1297	0/0:14,0:14:18.04:0,18,844	0/0:67,0:64:99:0,115,6351	0/0:16,0:17:17.73:0,18,683	0/0:25,0:23:4.80:0,5,540	0/1:9,0:8:9.10:9,0,147	0/0:9,0:7:3.65:0,4,138
chr10	76477779	.	GTGTGTGTGTGTC	G	2126.56	PASS	AB=0.913;AC=16;AF=0.286;AN=56;BaseQRankSum=1.876;DP=592;FS=18.849;HRun=0;HaplotypeScore=170.1112;InbreedingCoeff=0.1407;MQ=52.11;MQ0=27;MQRankSum=2.671;QD=8.54;ReadPosRankSum=0.325;VQSLOD=1.7220;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:29:9.54:10,0,42	0/0:3,0:3:3.01:0,3,66	0/0:7,0:2:5.96:0,6,43	0/1:16,0:4:14.96:15,0,37	1/1:2,10:12:0.47:1,0,0	0/1:20,0:18:9.03:9,0,399	0/0:29,0:29:22.86:0,23,364	0/0:23,0:22:42.72:0,43,330	0/0:22,0:20:36.52:0,37,919	0/0:17,0:16:2.81:0,3,165	0/0:19,0:19:36.02:0,36,495	0/0:22,0:22:28.23:0,28,565	0/0:19,0:17:14.95:0,15,473	0/0:14,0:13:24.04:0,24,413	0/0:11,0:11:24.04:0,24,380	0/0:25,0:24:62.74:0,63,1332	0/0:30,0:28:50.38:0,50,638	1/1:18,1:19:1.15:389,1,0	1/1:8,10:18:8.17:292,8,0	0/1:10,0:8:28.96:82,0,29	1/1:64,1:60:9.56:784,10,0	0/0:20,0:19:32.23:0,32,503	0/0:15,0:15:21.01:0,21,443	0/0:67,0:64:99:0,112,3183	0/1:16,0:16:21.61:195,0,22	0/1:11,14:23:21.20:344,0,21	0/1:9,0:8:8.01:58,0,8	0/1:4,4:7:46.04:103,0,46
chr10	76477986	.	TG	T	6483.15	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.871;DP=554;FS=0.696;HRun=2;HaplotypeScore=78.3983;InbreedingCoeff=0.9751;MQ=75.80;MQ0=0;MQRankSum=-9.152;QD=32.74;ReadPosRankSum=-1.225;VQSLOD=4.2833;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,38:45:99:1418,114,0	0/0:9,0:9:27.08:0,27,384	0/0:9,0:10:15.05:0,15,225	0/0:18,0:18:44.98:0,45,611	1/1:5,20:25:63.13:767,63,0	0/0:13,0:13:39.13:0,39,584	0/0:19,0:19:57.19:0,57,851	0/0:15,0:15:39.13:0,39,568	0/0:21,0:21:63.21:0,63,943	0/0:29,0:29:75.25:0,75,1121	0/0:14,0:14:36.12:0,36,535	0/0:17,0:17:48.16:0,48,717	0/0:23,0:23:63.21:0,63,936	0/0:20,0:20:60.19:0,60,877	0/0:15,0:15:45.15:0,45,674	0/0:36,0:36:99:0,105,1537	0/0:31,0:31:93.31:0,93,1388	1/1:3,17:20:12.19:636,12,0	1/1:1,18:19:54.18:699,54,0	1/1:2,11:13:36.04:434,36,0	1/1:5,21:26:69.16:858,69,0	0/0:22,0:22:60.20:0,60,878	0/0:11,0:11:30.10:0,30,447	0/0:33,0:33:99:0,99,1451	1/1:1,6:7:21.06:261,21,0	1/1:5,14:19:6.32:561,6,0	1/1:1,17:18:51.17:660,51,0	1/1:2,3:5:15.05:190,15,0
chr10	76478015	.	T	TA	7857.11	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=5.233;DP=593;FS=0.675;HRun=1;HaplotypeScore=80.7886;InbreedingCoeff=0.9862;MQ=87.71;MQ0=0;MQRankSum=-10.321;QD=37.59;ReadPosRankSum=-1.392;VQSLOD=4.6749;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,38:43:95.97:1302,96,0	0/0:4,0:4:12.03:0,12,150	0/0:16,0:16:41.79:0,42,523	0/0:30,0:30:71.16:0,71,809	1/1:2,15:17:45.12:664,45,0	0/0:16,0:16:45.15:0,45,627	0/0:22,0:22:66.15:0,66,849	0/0:21,0:21:60.17:0,60,775	0/0:25,0:25:75.23:0,75,1024	0/0:24,0:24:69.22:0,69,931	0/0:12,0:12:28.01:0,28,412	0/0:28,0:28:81.09:0,81,1079	0/0:16,0:16:48.16:0,48,669	0/0:18,0:18:51.15:0,51,678	0/0:18,0:18:54.12:0,54,713	0/0:35,0:35:99:0,99,1363	0/0:31,0:31:93.25:0,93,1239	1/1:5,17:22:57:773,57,0	1/1:2,22:25:75.13:1066,75,0	1/1:3,12:15:42.08:594,42,0	1/1:4,24:28:63.21:986,63,0	0/0:23,0:23:66.18:0,66,871	0/0:9,0:9:27.08:0,27,357	0/0:36,0:36:99:0,102,1334	1/1:0,14:14:36.12:572,36,0	1/1:2,15:17:9.63:697,10,0	1/1:2,19:21:53.42:918,53,0	1/1:0,7:7:18.06:284,18,0
chr10	76479899	.	AAGGGAGG	A	795.29	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.927;DP=731;FS=7.014;HRun=0;HaplotypeScore=165.4653;InbreedingCoeff=0.9795;MQ=60.78;MQ0=1;MQRankSum=-5.545;QD=16.23;ReadPosRankSum=-0.145;VQSLOD=2.2270;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,41:49:28.09:889,28,0	0/0:5,0:5:15.05:0,15,304	0/0:24,0:16:33.03:0,33,687	0/0:27,0:21:42.79:0,43,1151	0/0:16,0:16:33.10:0,33,927	0/0:21,0:20:30.98:0,31,1567	0/0:34,0:34:75.24:0,75,2483	0/0:30,0:30:72.24:0,72,1867	0/0:38,0:38:96.28:0,96,3276	0/0:17,0:17:33.09:0,33,967	0/0:12,0:12:24.08:0,24,830	0/0:36,0:36:84.26:0,84,2794	0/0:23,0:23:60.21:0,60,2192	0/0:29,0:29:78.24:0,78,2408	0/0:38,0:37:99:0,102,3390	0/0:28,0:28:75.24:0,75,2561	0/0:35,0:35:81.28:0,81,2939	0/0:30,0:30:72.25:0,72,2469	0/0:17,0:17:36.11:0,36,972	0/0:14,0:14:36.10:0,36,994	0/0:47,0:47:99:0,125,3739	0/0:21,0:21:51.17:0,51,1731	0/0:16,0:16:39.11:0,39,1298	0/0:36,0:36:69.19:0,69,2314	0/0:26,0:26:66.22:0,66,2220	0/0:37,0:37:93.30:0,93,3059	0/0:14,0:13:30.10:0,30,973	0/0:11,0:11:33.09:0,33,1081
chr10	76480112	.	GA	G	5815.78	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=10.422;DP=611;FS=8.529;HRun=10;HaplotypeScore=74.0228;InbreedingCoeff=0.8675;MQ=58.90;MQ0=16;MQRankSum=-1.170;QD=11.99;ReadPosRankSum=2.405;VQSLOD=4.0291;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,42:45:99:937,108,0	1/1:2,9:10:20.99:182,21,0	0/0:3,0:3:6.01:0,6,62	0/1:7,0:6:15.05:15,0,101	1/1:2,0:19:33.97:98,34,0	1/1:2,20:20:40.16:384,40,0	1/1:3,28:31:32.81:513,33,0	1/1:11,24:35:66.11:568,66,0	0/0:14,1:15:7.03:0,7,306	1/1:5,15:18:25.21:345,25,0	1/1:4,19:23:50.97:442,51,0	0/0:28,0:26:66.01:0,66,709	0/0:22,1:21:25.08:0,25,503	1/1:4,21:24:50.99:443,51,0	1/1:5,21:25:20.81:410,21,0	1/1:1,11:12:26.99:234,27,0	1/1:2,19:20:53.99:469,54,0	1/1:7,0:33:45.15:133,45,0	1/1:5,0:21:31.48:93,31,0	1/1:4,0:21:30.55:90,31,0	1/1:3,0:27:42.78:126,43,0	0/0:21,0:21:57.13:0,57,619	0/0:10,0:8:15.01:0,15,154	0/0:24,2:26:34.13:0,34,604	1/1:6,0:19:30.74:90,31,0	1/1:5,0:28:46.36:136,46,0	1/1:2,0:16:22.18:65,22,0	1/1:4,0:8:14.26:42,14,0
chr10	76480538	.	T	TTGTGTG	2308.66	PASS	AB=0.882;AC=21;AF=0.420;AN=50;BaseQRankSum=-1.142;DP=549;FS=14.998;HRun=0;HaplotypeScore=156.5225;InbreedingCoeff=0.5982;MQ=55.91;MQ0=5;MQRankSum=-0.709;QD=8.95;ReadPosRankSum=-5.153;VQSLOD=-0.0765;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:39:9.50:143,10,0	0/0:13,0:13:3.01:0,3,42	./.	./.	0/0:8,6:19:0.39:0,0,1	0/0:17,0:17:20.86:0,21,292	1/1:27,0:27:2.75:18,3,0	0/1:18,0:17:0.52:1,0,38	0/1:10,0:11:7.81:8,0,153	0/0:26,0:26:16.83:0,17,191	0/0:18,0:18:2.65:0,3,41	0/0:13,0:13:5.39:0,5,338	0/0:16,0:17:17.68:0,18,332	./.	0/0:17,0:17:15.05:0,15,209	0/0:15,0:15:9.03:0,9,126	0/0:24,0:24:8.84:0,9,99	1/1:24,4:30:32.36:717,32,0	1/1:15,0:19:14.80:162,15,0	1/1:5,5:17:3.01:42,3,0	1/1:36,0:35:28.91:420,29,0	0/0:10,0:10:18.05:0,18,311	0/0:11,0:12:20.82:0,21,361	0/0:29,0:35:45.12:0,45,808	1/1:12,0:11:7.84:95,8,0	0/1:10,11:22:0.10:675,0,0	1/1:12,8:20:4.83:102,5,0	1/1:3,0:3:4.26:94,4,0
chr10	76480565	.	TGTGTGTGCGCGC	T	3136.72	PASS	AB=0.970;AC=18;AF=0.321;AN=56;BaseQRankSum=4.951;DP=500;FS=5.798;HRun=0;HaplotypeScore=168.9810;InbreedingCoeff=0.2954;MQ=51.27;MQ0=7;MQRankSum=-3.086;QD=14.32;ReadPosRankSum=2.099;VQSLOD=1.8276;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:42:38.14:0,38,592	0/1:8,1:9:13.97:109,0,14	0/1:12,0:7:16.81:17,0,51	0/0:12,0:2:6.02:0,6,107	0/0:17,0:17:11.89:0,12,119	1/1:23,2:25:29.55:535,30,0	1/1:21,1:22:14.20:121,14,0	0/1:20,0:19:24.72:744,0,25	0/0:6,0:6:18.06:0,18,738	0/1:18,2:20:9.78:877,0,10	1/1:15,1:16:8.83:145,9,0	0/0:13,0:13:33.11:0,33,1384	0/0:14,0:14:32.85:0,33,1273	1/1:11,0:11:2.92:17,3,0	0/1:19,0:19:23.87:323,0,24	1/1:12,0:12:12.04:210,12,0	0/1:29,0:29:9.37:154,0,9	0/0:30,0:30:57.26:0,57,1680	0/0:14,0:14:39.11:0,39,834	0/0:14,0:13:9:0,9,258	0/0:34,0:32:50.88:0,51,1491	0/0:8,0:8:24.07:0,24,1156	0/0:15,0:15:33.58:0,34,1474	0/0:35,0:35:78.27:0,78,3376	0/0:10,0:10:12.04:0,12,362	0/1:19,1:20:58.21:58,0,1580	0/0:14,0:13:7.77:0,8,167	0/1:4,0:4:4.14:4,0,188
chr10	76480567	.	TGTGTGCGCGC	T	4771.49	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=0.929;DP=495;FS=5.768;HRun=0;HaplotypeScore=151.5428;InbreedingCoeff=0.6611;MQ=52.53;MQ0=6;MQRankSum=-2.389;QD=22.40;ReadPosRankSum=1.346;VQSLOD=4.0094;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:43:32.19:0,32,436	1/1:2,7:9:3.01:81,3,0	0/1:9,0:6:16.81:17,0,21	0/0:13,0:2:0.72:0,1,47	0/0:17,0:17:8.77:0,9,90	1/1:4,20:24:29.79:852,30,0	1/1:4,18:22:15.05:332,15,0	1/1:20,0:19:41.22:900,41,0	0/0:7,0:7:21.07:0,21,711	1/1:6,14:20:45.15:1087,45,0	1/1:3,12:15:8.61:207,9,0	0/0:13,0:13:33.11:0,33,1145	0/0:13,0:13:27.39:0,27,1049	1/1:0,11:11:3.01:54,3,0	1/1:3,16:19:18.06:560,18,0	1/1:1,11:12:12.04:395,12,0	1/1:1,26:27:8.75:258,9,0	0/0:30,0:30:49.80:0,50,1262	0/0:14,0:14:36.36:0,36,611	0/0:15,0:14:11.89:0,12,202	0/0:34,0:32:53.64:0,54,1189	0/0:8,0:8:21.07:0,21,975	0/0:17,0:17:39.13:0,39,1330	0/0:33,0:33:78.27:0,78,2860	0/0:9,0:9:12.03:0,12,260	0/1:20,0:20:23.56:24,0,1220	0/0:13,0:12:7.51:0,8,132	0/1:4,0:4:4.14:4,0,148
chr10	76480569	.	TGTGCGCGC	T	3864.07	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=3.428;DP=475;FS=4.861;HRun=0;HaplotypeScore=138.2567;InbreedingCoeff=0.7193;MQ=52.83;MQ0=6;MQRankSum=-2.685;QD=19.32;ReadPosRankSum=1.216;VQSLOD=2.7703;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:41:32.04:0,32,386	1/1:8,0:8:3.01:67,3,0	1/1:9,0:6:5.68:25,6,0	0/0:13,0:2:0.72:0,1,31	0/0:16,0:16:9.03:0,9,69	1/1:23,0:23:30.04:634,30,0	1/1:22,0:22:15.05:244,15,0	1/1:2,17:18:50.55:905,51,0	0/0:7,0:7:21.07:0,21,616	1/1:17,0:17:45.09:902,45,0	1/1:13,0:13:9.03:174,9,0	0/0:12,0:12:33.10:0,33,887	0/0:13,0:13:28.10:0,28,831	1/1:11,0:11:3.01:54,3,0	1/1:17,0:17:18.06:390,18,0	1/1:12,0:12:12.04:259,12,0	1/1:26,0:26:8.83:190,9,0	0/0:29,0:29:51.22:0,51,990	0/0:14,0:14:33.99:0,34,440	0/0:13,0:12:8.88:0,9,119	0/0:34,0:32:50.47:0,50,855	0/0:8,0:8:24.08:0,24,849	0/0:16,0:16:39.11:0,39,1115	0/0:34,0:34:81.21:0,81,2371	0/0:9,0:9:12.03:0,12,203	0/1:19,0:19:15.52:16,0,877	0/0:13,0:12:7.20:0,7,98	0/1:4,0:4:4.14:4,0,104
chr10	76480582	.	GCT	G	3205.10	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=-1.114;DP=445;FS=19.085;HRun=0;HaplotypeScore=105.1005;InbreedingCoeff=0.7191;MQ=70.86;MQ0=1;MQRankSum=-1.270;QD=16.19;ReadPosRankSum=0.987;VQSLOD=2.4398;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:26,2:27:37.32:463,37,0	0/0:7,0:7:1.82:0,2,5	0/1:15,0:12:39.31:39,0,90	0/1:13,0:8:30.16:30,0,54	1/1:16,0:16:20.33:237,20,0	0/0:27,0:27:15.66:0,16,59	0/0:22,0:22:13.64:0,14,93	0/0:17,0:17:34.25:0,34,186	0/0:10,0:10:29.91:0,30,401	0/0:16,0:16:29.28:0,29,141	0/0:12,0:12:2.02:0,2,5	0/0:11,0:11:33.05:0,33,420	0/0:12,0:12:30.95:0,31,444	1/1:10,0:10:0.47:1,0,0	0/0:16,0:16:11.30:0,11,46	0/0:13,0:13:11.39:0,11,65	0/0:26,0:26:7.21:0,7,34	1/1:23,1:24:58.95:613,59,0	1/1:11,0:11:29.43:335,29,0	1/1:7,0:7:6.02:80,6,0	1/1:24,0:24:53.31:696,53,0	0/0:8,0:8:21.07:0,21,319	0/0:18,0:18:43.14:0,43,561	0/0:32,0:32:78.16:0,78,1158	1/1:9,3:12:26.96:285,27,0	1/1:22,1:23:19.42:452,19,0	1/1:9,1:10:11.90:119,12,0	1/1:5,0:5:5.59:57,6,0
chr10	76481491	.	A	AAAAAAAGAGGGCC	44851.20	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=3.702;DP=557;FS=0.424;HRun=0;HaplotypeScore=181.7466;InbreedingCoeff=0.9782;MQ=56.03;MQ0=0;MQRankSum=-12.969;QD=101.24;ReadPosRankSum=-0.231;VQSLOD=4.7576;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:34:69.71:2918,70,0	1/1:2,0:10:23.88:1041,24,0	0/0:14,0:12:7.02:0,7,452	0/0:9,0:7:15.01:0,15,307	1/1:13,9:35:69.11:3039,69,0	1/1:10,0:17:45.15:1989,45,0	1/1:7,0:12:30.09:1030,30,0	1/1:28,0:39:99:3959,105,0	0/0:14,0:14:36.10:0,36,1192	1/1:13,0:26:71.10:2913,71,0	1/1:10,0:28:72.20:3062,72,0	0/0:14,0:14:42.05:0,42,1111	0/0:12,0:12:33.11:0,33,1177	1/1:8,0:15:27.05:800,27,0	1/1:6,0:26:69.24:2975,69,0	1/1:4,0:13:36.12:1573,36,0	1/1:15,0:25:57.19:2344,57,0	1/1:4,2:13:18.06:999,18,0	1/1:9,7:26:75.19:3108,75,0	1/1:6,9:26:45.11:2440,45,0	1/1:3,3:9:18.01:962,18,0	0/0:15,0:15:39.11:0,39,1377	0/0:26,0:26:71.87:0,72,2541	0/0:10,0:10:21.06:0,21,684	1/1:4,9:21:33.11:2023,33,0	1/1:9,9:23:54.09:2491,54,0	1/1:7,15:29:63.17:3720,63,0	1/1:2,6:13:24.08:1464,24,0
chr10	76484564	.	ATGCCACCCCCT	A	1784.24	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.454;DP=617;FS=1.780;HRun=0;HaplotypeScore=196.3275;InbreedingCoeff=0.9934;MQ=72.57;MQ0=0;MQRankSum=-7.767;QD=50.98;ReadPosRankSum=0.080;VQSLOD=3.2715;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,26:35:63.09:1879,63,0	0/0:10,0:10:24.08:0,24,1358	0/0:8,0:8:24.08:0,24,1248	0/0:12,0:12:33.11:0,33,1267	0/0:12,0:12:30.09:0,30,1363	0/0:16,0:16:48.15:0,48,2416	0/0:29,0:29:81.26:0,81,4367	0/0:27,0:27:72.25:0,72,3658	0/0:35,0:35:96.33:0,96,4847	0/0:20,0:20:60.21:0,60,3076	0/0:19,0:19:51.18:0,51,2777	0/0:26,0:26:75.26:0,75,4106	0/0:28,0:28:84.29:0,84,4552	0/0:27,0:27:81.26:0,81,4313	0/0:27,0:27:78.27:0,78,4237	0/0:31,0:31:87.30:0,87,4483	0/0:24,0:24:69.24:0,69,3805	0/0:33,0:33:96.33:0,96,5069	0/0:10,0:10:27.09:0,27,1322	0/0:12,0:12:33.08:0,33,1542	0/0:63,0:63:99:0,178,9711	0/0:17,0:17:48.16:0,48,2500	0/0:16,0:16:42.14:0,42,2101	0/0:19,0:19:54.19:0,54,2738	0/0:17,0:17:51.18:0,51,2904	0/0:17,0:17:48.15:0,48,2429	0/0:17,0:17:48.16:0,48,2712	0/0:10,0:10:30.08:0,30,1554
chr10	76484828	.	GA	G	5405.55	PASS	AB=0.943;AC=41;AF=0.732;AN=56;BaseQRankSum=8.666;DP=620;FS=0.000;HRun=11;HaplotypeScore=99.2462;InbreedingCoeff=0.8722;MQ=72.60;MQ0=2;MQRankSum=-0.993;QD=11.60;ReadPosRankSum=2.144;VQSLOD=4.5447;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,27:35:76.85:614,77,0	1/1:2,0:18:30.08:88,30,0	0/0:26,0:20:34.82:0,35,266	0/1:31,2:22:3.85:4,0,146	1/1:4,17:21:18.93:361,19,0	1/1:4,0:15:12.01:44,12,0	1/1:2,0:14:22.41:65,22,0	1/1:1,0:22:41.21:119,41,0	0/0:19,2:21:7.86:0,8,494	1/1:3,0:27:45.28:131,45,0	1/1:0,0:12:24.44:71,24,0	0/0:20,1:21:23.48:0,23,453	0/0:13,1:16:17.16:0,17,348	1/1:4,0:26:38.69:112,39,0	1/1:4,0:24:30.55:88,31,0	1/1:1,1:23:39.66:131,40,0	1/1:3,0:28:50.92:147,51,0	1/1:6,26:33:71.53:593,72,0	1/1:4,22:25:65.91:540,66,0	1/1:3,18:21:50.93:418,51,0	1/1:2,14:16:41.95:344,42,0	0/0:18,4:23:1.65:0,2,400	0/0:20,0:20:39.10:0,39,416	0/0:25,1:26:39.05:0,39,631	1/1:2,15:17:41.95:345,42,0	1/1:3,23:27:73.15:575,73,0	1/1:1,20:21:59.93:493,60,0	1/1:1,6:7:14.98:123,15,0
chr10	76485567	.	AGTGTGTGTGT	A	896.36	PASS	AC=18;AF=0.346;AN=52;BaseQRankSum=3.717;DP=594;FS=13.316;HRun=0;HaplotypeScore=160.6011;InbreedingCoeff=0.6995;MQ=68.79;MQ0=12;MQRankSum=-5.091;QD=4.67;ReadPosRankSum=-0.853;VQSLOD=1.7998;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:25:9.97:0,10,116	0/0:9,0:8:15.05:0,15,518	./.	./.	1/1:14,4:18:3.01:88,3,0	0/0:20,0:24:16.28:0,16,359	0/0:28,0:30:30.10:0,30,968	0/0:19,0:19:10.58:0,11,128	0/0:26,0:26:27.09:0,27,1018	0/0:19,0:19:24.08:0,24,882	0/0:7,0:7:6.02:0,6,252	0/0:23,0:22:33.10:0,33,1193	0/0:8,0:8:9.03:0,9,327	0/0:16,0:25:15.05:0,15,416	0/0:14,0:14:15.04:0,15,422	0/0:19,0:26:15.51:0,16,420	0/0:19,0:21:39.12:0,39,1512	1/1:7,3:10:2.97:88,3,0	1/1:18,0:18:3.31:70,3,0	1/1:12,3:15:3.48:89,3,0	1/1:41,18:59:2.39:10,2,0	0/0:5,0:5:6.02:0,6,197	0/0:9,0:8:12.04:0,12,487	0/0:20,0:34:21.07:0,21,747	1/1:8,7:15:12.04:352,12,0	1/1:18,0:18:2.89:26,3,0	1/1:22,1:22:5.33:157,5,0	1/1:9,4:13:6.02:177,6,0
chr10	76488124	.	T	TC	667.86	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=0.644;DP=581;FS=25.124;HRun=8;HaplotypeScore=67.5237;InbreedingCoeff=0.5210;MQ=81.59;MQ0=9;MQRankSum=1.090;QD=6.36;ReadPosRankSum=-1.212;VQSLOD=-0.2619;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:26:66.20:762,66,0	0/0:9,0:9:26.96:0,27,235	0/1:65,0:29:2.56:3,0,194	0/0:54,1:26:6.83:0,7,266	0/0:18,1:19:16.28:0,16,387	0/0:14,0:14:42.01:0,42,381	0/0:20,0:20:53.98:0,54,483	0/1:13,0:13:1.84:2,0,144	0/0:16,0:16:41.99:0,42,375	0/0:16,0:16:36:0,36,325	0/0:8,0:8:12:0,12,107	0/0:25,0:25:48:0,48,435	0/0:14,0:14:29.99:0,30,267	0/0:12,0:12:27:0,27,241	0/0:16,0:16:38.95:0,39,344	0/0:25,0:25:65.99:0,66,593	0/0:30,0:30:78.02:0,78,707	0/0:16,0:16:44.99:0,45,402	0/0:14,0:15:23.80:0,24,205	0/0:19,0:19:54:0,54,481	0/0:19,0:19:47.99:0,48,429	0/0:13,0:13:39.02:0,39,357	0/0:18,0:18:48:0,48,433	0/0:24,0:24:65.98:0,66,591	0/0:24,0:24:66.01:0,66,596	0/0:21,0:21:51.01:0,51,464	0/0:22,0:22:62.98:0,63,568	0/0:5,0:5:9:0,9,82
chr10	76489221	.	GTTT	G	3059.65	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=2.729;DP=518;FS=22.951;HRun=16;HaplotypeScore=85.8064;InbreedingCoeff=0.8995;MQ=70.88;MQ0=3;MQRankSum=-0.740;QD=14.57;ReadPosRankSum=5.304;VQSLOD=0.6323;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:35:44.77:261,45,0	1/1:3,2:6:4.42:62,4,0	0/0:35,0:23:23.60:0,24,229	0/0:22,0:13:2.07:0,2,141	0/0:10,0:12:30.08:0,30,430	1/1:4,17:22:42.74:427,43,0	1/1:9,20:33:56.04:569,56,0	1/1:16,10:27:22.40:273,22,0	0/0:14,0:15:39.02:0,39,460	1/1:5,14:19:29.07:355,29,0	0/0:3,2:5:2.80:0,3,13	0/0:20,0:22:66.13:0,66,933	0/0:17,0:19:51.10:0,51,747	1/1:4,18:22:41.92:439,42,0	1/1:3,8:11:22.69:229,23,0	1/1:1,10:11:23.97:244,24,0	1/1:6,16:24:35.81:413,36,0	0/0:16,0:18:41.98:0,42,531	0/0:11,0:17:39.07:0,39,498	0/0:6,0:10:21.01:0,21,252	0/0:11,0:18:27.06:0,27,396	0/0:7,0:10:27.03:0,27,368	0/0:15,0:16:32.96:0,33,391	0/0:32,0:35:88.92:0,89,1233	0/0:5,0:16:12.04:0,12,171	0/0:14,0:16:36.03:0,36,430	0/0:2,0:16:8.99:0,9,91	0/0:2,0:4:8.36:0,8,72
chr10	76489235	.	TTTC	T	453.13	PASS	AB=0.986;AC=10;AF=0.179;AN=56;BaseQRankSum=8.648;DP=505;FS=0.000;HRun=0;HaplotypeScore=90.1737;InbreedingCoeff=0.0542;MQ=67.00;MQ0=3;MQRankSum=0.260;QD=2.76;ReadPosRankSum=8.046;VQSLOD=0.3477;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:30.83:0,31,202	0/1:3,0:3:2.41:16,0,2	0/0:26,0:15:23.90:0,24,254	0/0:20,0:13:6.02:0,6,141	0/0:17,0:17:41.88:0,42,519	0/1:20,0:20:22.68:71,0,23	0/1:31,1:32:94.11:94,0,112	0/1:23,1:24:33.08:33,0,187	0/0:13,0:13:18.05:0,18,305	0/1:17,0:17:44.54:60,0,45	0/0:4,0:4:2.99:0,3,24	0/0:24,0:24:61.84:0,62,909	0/0:20,0:20:54.13:0,54,805	0/1:20,0:20:10.42:96,0,10	1/1:9,1:10:18.95:107,19,0	0/1:14,0:14:37.75:38,0,71	0/1:23,1:24:81.17:87,0,81	0/0:21,0:21:48.03:0,48,631	0/0:16,0:16:27.05:0,27,367	0/0:11,0:10:18:0,18,225	0/0:15,0:15:36.07:0,36,497	0/0:15,0:15:39.05:0,39,494	0/0:15,0:15:24.01:0,24,264	0/0:34,0:34:71.87:0,72,1153	0/0:14,0:14:20.99:0,21,248	0/0:14,0:14:29.37:0,29,333	0/0:17,0:16:3.01:0,3,45	0/0:6,0:5:6:0,6,57
chr10	76489577	.	AAAAACG	A	3214.20	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=7.775;DP=495;FS=9.187;HRun=0;HaplotypeScore=74.2798;InbreedingCoeff=0.9277;MQ=57.52;MQ0=22;MQRankSum=-6.314;QD=29.22;ReadPosRankSum=0.650;VQSLOD=2.1174;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:30.10:0,30,1055	1/1:0,6:6:6.49:148,6,0	0/0:25,0:14:30.91:0,31,970	0/0:24,0:9:17.60:0,18,325	0/0:24,0:23:47.95:0,48,1666	1/1:1,9:9:15.05:347,15,0	1/1:0,12:12:11.91:300,12,0	1/1:3,9:9:26.97:325,27,0	0/0:23,0:21:21.06:0,21,700	1/1:2,9:9:24.07:532,24,0	1/1:0,11:11:21:430,21,0	0/0:25,0:24:33.11:0,33,1078	0/0:17,0:17:17.68:0,18,674	1/1:1,8:8:9.02:224,9,0	1/1:3,7:7:6.02:147,6,0	1/1:1,13:13:27.04:672,27,0	1/1:3,12:12:12.04:298,12,0	0/0:32,0:30:34.30:0,34,1093	0/0:25,0:25:72.03:0,72,1907	0/0:15,0:11:21.07:0,21,512	0/0:27,0:26:12.04:0,12,331	0/0:14,0:14:23.84:0,24,703	0/0:18,0:18:38.82:0,39,1006	0/0:14,0:13:8.55:0,9,338	0/0:14,0:13:36.11:0,36,1091	0/0:19,0:18:54.08:0,54,1549	0/0:16,0:16:21.07:0,21,716	0/0:16,0:15:18.04:0,18,505
chr10	76489956	.	CG	C	3077.07	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=2.391;DP=419;FS=13.572;HRun=1;HaplotypeScore=53.7975;InbreedingCoeff=0.9455;MQ=41.71;MQ0=24;MQRankSum=-2.769;QD=22.14;ReadPosRankSum=0.266;VQSLOD=2.2597;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:20:53.89:0,54,733	1/1:5,3:8:11.95:141,12,0	0/0:3,0:2:5.38:0,5,38	0/0:6,0:3:2.79:0,3,13	0/0:14,0:11:23.86:0,24,262	1/1:8,9:17:39.06:470,39,0	1/1:6,9:12:27.01:332,27,0	1/1:3,9:8:24.05:311,24,0	0/0:17,0:13:32.86:0,33,374	1/1:6,10:15:35.91:453,36,0	1/1:3,9:11:23.99:292,24,0	0/0:16,0:13:36.03:0,36,503	0/0:16,0:14:32.76:0,33,393	1/1:5,4:7:14.98:168,15,0	1/1:8,6:14:29.95:347,30,0	1/1:6,5:11:17.99:208,18,0	1/1:15,10:21:34.98:572,35,0	0/0:23,0:21:54.02:0,54,775	0/0:21,0:16:44.70:0,45,587	0/0:16,0:14:32.96:0,33,413	0/0:8,0:6:17.85:0,18,245	0/0:16,0:16:33.03:0,33,447	0/0:18,0:17:47.41:0,47,639	0/0:22,0:20:44.96:0,45,612	0/0:14,0:12:33.11:0,33,510	0/0:20,0:16:48.07:0,48,672	0/0:13,0:13:29.78:0,30,393	0/0:12,0:10:21.07:0,21,330
chr10	76489969	.	C	CA	1661.89	PASS	AB=0.843;AC=25;AF=0.446;AN=56;BaseQRankSum=1.067;DP=481;FS=3.542;HRun=15;HaplotypeScore=66.8539;InbreedingCoeff=0.1087;MQ=47.96;MQ0=21;MQRankSum=-3.288;QD=4.98;ReadPosRankSum=-1.237;VQSLOD=1.8807;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,3:25:32.19:190,32,0	0/1:7,3:11:30.18:91,0,30	0/1:13,0:6:0.23:0,0,33	0/0:13,0:6:5.40:0,5,30	0/1:14,0:13:2.61:3,0,89	1/1:12,2:16:5.65:136,6,0	0/1:10,4:13:12.05:119,0,12	0/1:7,12:19:12.42:207,0,12	0/1:12,1:11:5.55:6,0,75	1/1:14,7:20:20.22:189,20,0	1/1:11,6:17:5.09:170,5,0	0/0:12,0:13:21.47:0,21,115	0/0:13,0:14:27.55:0,28,154	1/1:8,0:7:11.95:94,12,0	0/1:10,6:16:8.82:170,0,9	0/1:5,4:9:0.07:102,0,0	1/1:24,3:23:4.68:232,5,0	0/1:21,1:21:1.05:1,0,208	0/0:22,0:17:22.84:0,23,132	0/0:17,1:16:6.22:0,6,142	0/0:12,0:11:23.32:0,23,137	0/0:15,0:16:22.44:0,22,128	0/1:13,2:15:28.72:29,0,62	0/1:20,3:23:33.17:33,0,149	0/1:12,4:15:51.08:55,0,51	0/0:19,1:16:6.14:0,6,136	0/0:13,1:15:0.46:0,0,106	0/1:15,1:17:1.47:1,0,84
chr10	76490435	.	AACAC	A	1426.82	PASS	AB=0.891;AC=27;AF=0.519;AN=52;BaseQRankSum=0.393;DP=511;FS=20.025;HRun=0;HaplotypeScore=95.4068;InbreedingCoeff=0.1779;MQ=66.82;MQ0=14;MQRankSum=-0.811;QD=4.72;ReadPosRankSum=0.169;VQSLOD=0.6707;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,1:36:6.40:41,0,6	0/1:5,1:6:11.91:12,0,83	0/0:43,0:26:0:0,0,0	./.	1/1:10,6:17:14.79:187,15,0	0/0:23,0:23:21.07:0,21,360	0/1:25,2:27:71.71:72,0,217	0/0:17,0:15:1.82:0,2,5	0/1:8,0:12:11.47:11,0,83	0/1:13,0:14:51.96:52,0,207	0/1:11,0:13:19.03:19,0,104	0/1:13,1:15:44.38:76,0,44	0/0:4,0:7:2.74:0,3,12	0/0:7,0:7:9.03:0,9,145	0/1:16,0:18:1.38:1,0,373	0/0:13,0:13:17.80:0,18,320	0/1:22,0:24:11.06:11,0,511	1/1:12,7:18:12.04:185,12,0	1/1:13,0:13:0.88:2,1,0	1/1:14,5:19:12.04:175,12,0	1/1:16,0:15:3.01:46,3,0	0/0:18,0:23:13.93:0,14,64	./.	0/0:18,0:22:11.03:0,11,50	1/1:10,10:20:21.07:325,21,0	1/1:9,4:13:9.08:160,9,0	1/1:7,2:9:9.02:121,9,0	1/1:4,6:10:6.02:93,6,0
chr10	76491419	.	AAAG	A	1576.96	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=5.282;DP=568;FS=1.277;HRun=0;HaplotypeScore=115.7315;InbreedingCoeff=0.7257;MQ=68.87;MQ0=10;MQRankSum=-0.001;QD=8.09;ReadPosRankSum=-2.788;VQSLOD=2.3640;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:96.22:0,96,862	0/0:17,0:17:43.03:0,43,423	0/0:33,0:16:36.73:0,37,384	0/0:38,0:22:30.69:0,31,510	1/1:22,0:22:49.89:271,50,0	0/0:25,0:25:22.95:0,23,512	0/0:14,0:14:31.26:0,31,298	0/0:27,0:24:29.76:0,30,484	0/0:10,0:10:27.08:0,27,538	0/1:22,0:22:60.97:61,0,269	0/1:23,0:23:44.05:44,0,269	0/0:13,0:13:36.10:0,36,660	0/0:15,0:15:42.11:0,42,747	0/0:17,0:17:44.27:0,44,452	0/0:18,0:17:35.49:0,35,337	0/0:15,0:14:7.26:0,7,288	0/0:34,0:34:30.61:0,31,737	1/1:26,2:28:60.32:408,60,0	1/1:18,1:19:46.98:324,47,0	1/1:16,0:16:34.22:173,34,0	1/1:13,1:13:28.45:174,28,0	0/0:5,0:5:15.05:0,15,316	0/0:9,0:9:27.07:0,27,417	0/0:30,0:30:87.23:0,87,1628	1/1:15,0:15:23.20:112,23,0	0/1:21,0:21:44.75:45,0,74	1/1:14,1:14:25.86:168,26,0	0/0:14,0:14:11.64:0,12,29
chr10	76491420	.	AAG	A	4582.47	PASS	AB=0.994;AC=24;AF=0.429;AN=56;BaseQRankSum=-0.265;DP=563;FS=4.770;HRun=0;HaplotypeScore=94.5738;InbreedingCoeff=0.5625;MQ=69.00;MQ0=10;MQRankSum=-0.871;QD=14.69;ReadPosRankSum=-2.533;VQSLOD=3.6108;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:43.90:0,44,424	0/0:17,0:17:18.37:0,18,197	0/0:33,0:16:38.80:0,39,382	0/0:37,0:22:28.87:0,29,428	1/1:1,21:22:59.75:804,60,0	0/1:25,0:25:14.48:14,0,241	0/0:13,0:13:17.64:0,18,137	0/1:26,1:24:10.61:11,0,237	0/0:10,0:10:27.08:0,27,442	0/1:22,0:22:99:107,0,116	0/1:23,0:23:93.54:94,0,118	0/0:12,0:12:36.11:0,36,554	0/0:14,0:14:42.11:0,42,629	0/0:17,0:17:39.79:0,40,256	0/1:18,0:17:23.18:23,0,145	0/0:15,0:14:6:0,6,145	0/1:33,0:33:6.11:6,0,349	1/1:4,24:28:68.76:907,69,0	1/1:2,17:19:51.06:610,51,0	1/1:1,15:16:36.09:525,36,0	1/1:2,12:13:30.09:437,30,0	0/0:5,0:5:15.05:0,15,254	0/0:9,0:9:27.06:0,27,358	0/0:31,0:31:90.21:0,90,1357	1/1:0,15:15:24.08:367,24,0	1/1:20,1:21:14.86:201,15,0	1/1:3,12:14:27.04:367,27,0	1/1:14,0:14:24.39:110,24,0
chr10	76491421	.	AG	A	4455.15	PASS	AB=0.965;AC=32;AF=0.571;AN=56;BaseQRankSum=3.260;DP=557;FS=2.311;HRun=1;HaplotypeScore=86.2596;InbreedingCoeff=0.4282;MQ=69.25;MQ0=10;MQRankSum=-1.054;QD=10.89;ReadPosRankSum=-3.826;VQSLOD=1.5608;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:36,2:38:29.95:133,0,30	0/1:16,1:17:12.86:62,0,13	0/0:32,1:17:37.19:0,37,327	0/0:34,0:22:29.80:0,30,375	1/1:21,1:22:59.74:470,60,0	0/1:23,2:25:13.97:132,0,14	0/1:12,1:13:3.39:51,0,3	0/1:27,0:24:18.81:57,0,19	0/0:9,0:9:27.09:0,27,358	1/1:21,1:22:15.30:209,15,0	1/1:22,1:23:16.91:197,17,0	0/0:12,0:12:36.11:0,36,463	0/0:14,0:14:42.11:0,42,526	0/1:17,0:17:17.44:17,0,32	1/1:17,1:17:1.59:96,2,0	0/1:14,0:13:5.61:41,0,6	0/1:33,1:34:15.39:153,0,15	1/1:26,2:28:68.66:543,69,0	1/1:18,0:18:50.84:404,51,0	1/1:15,0:15:35.83:269,36,0	1/1:14,0:13:29.83:222,30,0	0/0:5,0:5:15.05:0,15,199	0/0:10,0:10:30.06:0,30,347	0/0:31,0:31:90.20:0,90,1102	1/1:15,0:15:23.90:181,24,0	1/1:6,15:21:46.33:646,46,0	1/1:14,0:13:26.85:199,27,0	1/1:0,14:14:27.09:371,27,0
chr10	76491605	.	TAAA	T	4445.17	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=5.626;DP=465;FS=0.828;HRun=13;HaplotypeScore=78.9490;InbreedingCoeff=0.9151;MQ=80.32;MQ0=3;MQRankSum=-3.091;QD=24.16;ReadPosRankSum=2.565;VQSLOD=4.1173;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:21:53.80:0,54,447	1/1:0,4:4:12.04:146,12,0	0/0:29,0:21:35.67:0,36,457	0/1:17,0:14:9.10:9,0,201	0/0:16,0:16:38.88:0,39,723	1/1:4,12:17:32.99:383,33,0	1/1:1,5:5:12.04:146,12,0	1/1:3,26:29:75.17:888,75,0	0/0:12,0:13:36.10:0,36,637	1/1:3,11:15:31.37:380,31,0	1/1:3,14:18:41.99:489,42,0	0/0:6,0:7:21.05:0,21,369	0/0:7,0:9:27.05:0,27,435	1/1:1,13:14:36.11:438,36,0	1/1:3,19:21:45.12:547,45,0	1/1:1,14:15:30.09:365,30,0	1/1:6,20:25:53.34:655,53,0	0/0:21,0:23:66.19:0,66,1159	0/0:14,0:18:42.12:0,42,727	0/0:19,0:22:54.13:0,54,915	0/0:5,0:5:15.05:0,15,288	0/0:5,0:5:12.04:0,12,211	0/0:14,0:14:36.11:0,36,659	0/0:12,0:12:33.11:0,33,628	0/0:16,0:17:48.06:0,48,833	0/0:20,0:22:57.15:0,57,1011	0/0:21,0:23:57.15:0,57,1045	0/0:21,0:23:60.18:0,60,1057
chr10	76492572	.	A	AG	9292.05	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-17.283;DP=623;FS=0.000;HRun=4;HaplotypeScore=60.0529;InbreedingCoeff=0.9951;MQ=86.32;MQ0=0;MQRankSum=-9.211;QD=34.80;ReadPosRankSum=3.695;VQSLOD=5.2183;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,45:49:99:1764,129,0	1/1:1,5:6:15.05:205,15,0	0/0:18,0:18:15.68:0,16,403	0/0:28,0:28:60.14:0,60,661	0/0:25,0:25:72.17:0,72,795	1/1:2,15:17:45.15:616,45,0	1/1:2,17:19:42.14:575,42,0	1/1:4,31:35:81.07:1088,81,0	0/0:23,0:23:69.20:0,69,783	1/1:2,20:22:57.19:779,57,0	1/1:2,17:19:45.15:615,45,0	0/0:23,0:23:60.15:0,60,671	0/0:18,0:18:48.12:0,48,534	1/1:2,16:18:42.14:572,42,0	1/1:2,20:22:57.19:780,57,0	1/1:2,33:35:99:1354,99,0	1/1:1,24:25:69.23:944,69,0	0/0:14,0:14:42.12:0,42,477	0/0:23,0:23:54.15:0,54,612	0/0:18,0:18:51.13:0,51,569	0/0:28,0:28:81.23:0,81,919	0/0:18,0:18:51.15:0,51,578	0/0:18,0:18:54.14:0,54,603	0/0:38,0:38:99:0,102,1156	0/0:15,0:15:42.11:0,42,468	0/0:15,0:15:36.09:0,36,401	0/0:27,0:27:81.23:0,81,919	0/0:7,0:7:21.06:0,21,238
chr10	76493103	.	G	GTGT	900.84	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=2.678;DP=683;FS=0.000;HRun=0;HaplotypeScore=124.1269;InbreedingCoeff=0.6916;MQ=83.23;MQ0=0;MQRankSum=-3.016;QD=18.38;ReadPosRankSum=-0.075;VQSLOD=3.0326;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,113,1022	0/0:8,0:8:18.01:0,18,162	0/0:32,0:30:45.08:0,45,578	0/0:41,0:40:48.15:0,48,677	0/0:21,0:21:51.15:0,51,722	0/0:20,0:20:8.03:0,8,400	0/0:25,0:25:48.46:0,48,422	0/0:39,0:39:57.29:0,57,609	0/0:23,0:23:60.16:0,60,826	0/0:15,0:15:31.80:0,32,243	0/0:12,0:12:26.98:0,27,232	0/0:30,0:30:81.06:0,81,1146	0/0:20,0:21:57.14:0,57,787	0/0:21,0:21:25.25:0,25,374	0/0:30,0:30:63.88:0,64,563	1/1:4,17:21:51.13:995,51,0	0/1:28,0:28:1.93:2,0,447	0/0:26,0:26:45.19:0,45,911	0/0:16,0:16:26.98:0,27,330	0/0:21,0:21:48.13:0,48,651	0/0:37,0:37:90.25:0,90,1250	0/0:18,0:18:33.11:0,33,479	0/0:22,0:22:51.15:0,51,720	0/0:25,0:25:69.23:0,69,1003	0/0:20,0:21:45.10:0,45,613	0/0:18,0:18:51.10:0,51,710	0/0:35,0:35:81.21:0,81,1115	0/0:11,0:11:12.02:0,12,153
chr10	76493347	.	TCA	T	10160.10	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.576;DP=718;FS=0.602;HRun=0;HaplotypeScore=84.0077;InbreedingCoeff=0.9847;MQ=94.06;MQ0=1;MQRankSum=-2.955;QD=36.68;ReadPosRankSum=3.072;VQSLOD=7.1745;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,49:49:99:1721,117,0	1/1:0,6:6:15.05:221,15,0	0/0:30,0:30:86.75:0,87,1507	0/0:33,0:33:90.21:0,90,1557	0/0:31,0:31:90.29:0,90,1652	1/1:0,17:17:48.16:706,48,0	1/1:0,24:24:60.20:876,60,0	1/1:2,29:31:87.28:1263,87,0	0/0:16,0:16:48.15:0,48,866	1/1:2,28:30:84.23:1173,84,0	1/1:0,14:14:33.07:460,33,0	0/0:23,0:23:69.24:0,69,1265	0/0:29,0:29:81.26:0,81,1482	1/1:2,19:21:36.12:530,36,0	1/1:2,26:28:72.24:1060,72,0	1/1:1,22:23:7.05:826,7,0	1/1:0,34:33:90.30:1324,90,0	0/0:12,0:12:33.06:0,33,549	0/0:19,0:19:57.20:0,57,1067	0/0:30,0:30:87.25:0,87,1522	0/0:32,0:32:93.31:0,93,1709	0/0:23,0:23:66.23:0,66,1228	0/0:27,0:27:78.27:0,78,1450	0/0:21,0:21:63.20:0,63,1148	0/0:18,0:18:48.15:0,48,850	0/0:38,0:38:99:0,114,2085	0/0:52,0:52:99:0,150,2684	0/0:7,0:7:21.07:0,21,393
chr10	76493918	.	C	CACA	28550.80	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-12.869;DP=763;FS=0.304;HRun=0;HaplotypeScore=105.7846;InbreedingCoeff=0.9985;MQ=87.69;MQ0=0;MQRankSum=-10.109;QD=52.29;ReadPosRankSum=2.790;VQSLOD=7.1702;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,40:46:99:2203,102,0	1/1:1,6:7:18.06:402,18,0	0/0:29,0:29:75.03:0,75,1152	0/0:34,0:34:86.28:0,86,1318	1/1:2,16:18:42.14:894,42,0	1/1:4,17:21:48.16:1057,48,0	1/1:5,36:44:99:2226,105,0	1/1:4,30:35:96.29:2071,96,0	0/0:22,0:22:63.18:0,63,979	1/1:6,21:30:75.23:1560,75,0	1/1:1,17:19:51.17:1103,51,0	0/0:37,0:37:99:0,111,1810	0/0:35,0:35:99:0,99,1561	1/1:6,17:23:45.15:1005,45,0	1/1:2,39:43:99:2463,111,0	1/1:5,33:39:93.32:2075,93,0	1/1:7,29:37:78.27:1741,78,0	1/1:4,18:22:62.41:1286,62,0	1/1:9,18:27:63.22:1405,63,0	1/1:0,13:15:33.11:718,33,0	1/1:3,21:25:57.20:1261,57,0	0/0:18,0:18:54.17:0,54,853	0/0:12,0:12:30.10:0,30,490	0/0:30,0:30:90.31:0,90,1466	1/1:2,18:20:51.18:1123,51,0	1/1:7,18:26:60.18:1280,60,0	1/1:4,29:33:75.04:1674,75,0	1/1:0,16:16:45.15:1005,45,0
chr10	76494739	.	A	AGT	9454.62	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-14.018;DP=957;FS=0.304;HRun=0;HaplotypeScore=128.7253;InbreedingCoeff=0.9839;MQ=63.15;MQ0=5;MQRankSum=-0.239;QD=30.70;ReadPosRankSum=1.044;VQSLOD=6.7260;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:42.14:0,42,546	1/1:1,7:8:6.02:102,6,0	0/0:37,0:30:56.92:0,57,626	0/0:45,0:28:59.07:0,59,695	0/0:25,0:25:69.21:0,69,877	1/1:2,14:16:27.09:458,27,0	1/1:17,34:51:99:1713,109,0	1/1:13,15:25:60.19:960,60,0	0/0:44,0:44:99:0,123,1541	1/1:1,36:39:99:1734,111,0	1/1:2,12:14:27.09:459,27,0	0/0:55,0:55:99:0,150,1874	0/0:28,0:28:75.21:0,75,945	1/1:9,35:44:45.15:764,45,0	1/1:8,31:38:45.12:765,45,0	1/1:3,32:35:69.16:1173,69,0	1/1:1,31:32:78.27:1326,78,0	0/0:26,1:27:41.02:0,41,885	0/0:30,0:30:57.06:0,57,682	0/0:13,0:13:33.09:0,33,414	0/0:107,0:107:99:0,280,3508	0/0:26,0:26:66.20:0,66,841	0/0:13,0:13:30.10:0,30,390	0/0:62,0:62:99:0,165,2074	0/0:14,0:14:33.10:0,33,417	0/0:37,0:36:99:0,99,1239	0/0:25,0:25:69.18:0,69,853	0/0:13,0:13:36.12:0,36,468
chr10	76494831	.	A	AGT	115.69	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.182;DP=963;FS=1.326;HRun=0;HaplotypeScore=187.1259;InbreedingCoeff=0.9480;MQ=51.26;MQ0=19;MQRankSum=-0.909;QD=4.13;ReadPosRankSum=0.416;VQSLOD=3.1210;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,18:28:11.88:201,12,0	0/0:17,0:17:33.01:0,33,385	0/0:47,0:19:34.19:0,34,397	0/0:52,0:19:29.37:0,29,359	0/0:27,0:27:44.94:0,45,577	0/0:27,0:26:44.73:0,45,559	0/0:37,0:37:47.74:0,48,602	0/0:39,0:33:66.17:0,66,818	0/0:38,0:38:99:0,99,1239	0/0:34,0:33:81.21:0,81,1003	0/0:17,0:17:17.96:0,18,216	0/0:58,0:58:99:0,142,1739	0/0:30,0:30:84.22:0,84,1054	0/0:34,0:29:33.03:0,33,401	0/0:36,0:35:32.94:0,33,423	0/0:25,0:23:23.95:0,24,306	0/0:27,0:26:54.17:0,54,683	0/0:28,0:27:19.93:0,20,704	0/0:35,0:33:93.27:0,93,1142	0/0:21,0:21:33.09:0,33,408	0/0:99,0:96:99:0,147,1868	0/0:24,0:24:63.17:0,63,773	0/0:16,0:16:45.07:0,45,530	0/0:73,0:73:99:0,168,2122	0/0:24,0:24:30.10:0,30,386	0/0:29,0:29:72.22:0,72,899	0/0:15,0:15:24.08:0,24,307	0/0:24,0:23:42.10:0,42,518
chr10	76494833	.	T	TGTGA	64.30	PASS	AB=0.906;AC=3;AF=0.054;AN=56;BaseQRankSum=4.280;DP=966;FS=3.310;HRun=0;HaplotypeScore=221.8289;InbreedingCoeff=0.5654;MQ=50.76;MQ0=20;MQRankSum=0.747;QD=1.07;ReadPosRankSum=-0.620;VQSLOD=2.3519;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:7.24:19,7,0	0/0:16,0:16:33.11:0,33,602	0/0:48,0:19:41.52:0,42,633	0/0:55,0:17:34.87:0,35,619	0/0:28,0:28:48.14:0,48,870	0/0:27,0:26:48.61:0,49,842	0/0:38,0:38:50.63:0,51,919	0/0:39,0:32:86.25:0,86,1411	0/0:38,0:38:99:0,105,1900	0/0:34,0:33:93.21:0,93,1570	0/0:17,0:17:24.94:0,25,383	0/0:56,0:56:99:0,156,2699	0/0:30,0:30:87.28:0,87,1616	0/0:33,0:28:32.70:0,33,612	0/0:34,1:34:37.82:0,38,645	0/0:23,0:21:23.32:0,23,421	0/0:28,0:27:62.89:0,63,1013	0/1:26,3:28:99:137,0,1100	0/0:35,0:33:94.54:0,95,1701	0/0:19,0:19:31.44:0,31,615	0/0:98,2:97:99:0,160,2850	0/0:26,0:26:72.20:0,72,1246	0/0:17,0:17:48.15:0,48,866	0/0:73,0:73:99:0,183,3283	0/0:24,0:24:29.71:0,30,555	0/0:29,0:29:81.25:0,81,1427	0/0:14,0:14:30.08:0,30,495	0/0:24,0:23:54.12:0,54,891
chr10	76494853	.	T	TGA	5017.10	PASS	AB=0.955;AC=36;AF=0.643;AN=56;BaseQRankSum=1.650;DP=917;FS=4.872;HRun=0;HaplotypeScore=206.0052;InbreedingCoeff=0.6569;MQ=48.44;MQ0=24;MQRankSum=-1.816;QD=8.49;ReadPosRankSum=-2.597;VQSLOD=3.5662;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:9.27:71,9,0	0/1:13,0:13:3.08:57,0,3	0/0:46,0:12:20.81:0,21,168	0/0:49,0:11:7.92:0,8,109	1/1:27,1:28:17.49:150,17,0	1/1:28,0:27:13.99:183,14,0	1/1:32,0:32:6.82:133,7,0	1/1:35,0:26:16.47:351,16,0	0/0:37,0:37:92.93:0,93,1034	0/1:33,0:32:28.70:149,0,29	1/1:14,0:14:11.54:75,12,0	0/0:46,0:46:80.58:0,81,1043	0/0:33,0:33:72.02:0,72,819	1/1:38,0:33:4.93:88,5,0	1/1:31,0:30:13.90:124,14,0	1/1:24,0:22:6.30:91,6,0	0/1:25,0:24:5.71:140,0,6	1/1:23,6:28:62.56:634,63,0	1/1:34,0:32:82.49:760,82,0	1/1:15,1:16:8.75:119,9,0	1/1:85,6:88:39.80:701,40,0	0/0:26,0:26:62.88:0,63,688	0/0:18,0:18:41.93:0,42,459	0/0:70,0:70:99:0,158,1757	1/1:33,0:32:25.68:196,26,0	1/1:23,3:26:37.18:609,37,0	1/1:9,1:10:17.05:138,17,0	0/1:18,5:23:5.66:251,0,6
chr10	76494861	.	AGTGTGTGT	A	3525.19	PASS	AB=0.977;AC=27;AF=0.482;AN=56;BaseQRankSum=12.921;DP=857;FS=2.650;HRun=0;HaplotypeScore=267.3262;InbreedingCoeff=0.2842;MQ=46.93;MQ0=25;MQRankSum=-10.136;QD=6.82;ReadPosRankSum=-2.562;VQSLOD=2.2277;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:27:5.82:0,6,39	1/1:5,7:12:23.84:437,24,0	0/0:37,0:8:3.46:0,3,25	0/0:43,0:8:9:0,9,92	0/1:23,0:24:10.60:11,0,18	1/1:11,16:26:24.42:253,24,0	1/1:25,3:28:15.73:146,16,0	0/1:30,0:20:33.32:45,0,33	0/0:34,0:36:78.14:0,78,2112	1/1:15,15:29:64.85:1102,65,0	1/1:10,3:13:3.76:17,4,0	0/0:39,0:41:93.23:0,93,2736	0/0:26,0:28:57.10:0,57,1706	1/1:16,21:32:18.03:324,18,0	1/1:20,9:28:4.39:72,4,0	1/1:15,7:21:11.74:236,12,0	0/1:22,3:24:14.87:90,0,15	0/1:29,0:28:99:144,0,265	0/1:36,0:33:15.89:16,0,285	0/0:17,0:17:8.99:0,9,74	0/1:83,0:81:6.61:7,0,231	0/0:26,0:26:60.07:0,60,1759	0/0:14,0:16:35.95:0,36,1105	0/0:65,0:68:99:0,153,4629	0/1:32,0:31:15.08:55,0,15	0/1:24,1:25:35.37:226,0,35	0/1:9,0:9:13.09:83,0,13	1/1:23,0:23:29.58:263,30,0
chr10	76494879	.	TGTGTGTGC	T	4078.80	PASS	AB=0.991;AC=34;AF=0.607;AN=56;BaseQRankSum=10.607;DP=791;FS=4.207;HRun=0;HaplotypeScore=255.8532;InbreedingCoeff=0.3564;MQ=46.14;MQ0=20;MQRankSum=-9.367;QD=7.18;ReadPosRankSum=-0.729;VQSLOD=2.3102;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:0.10:0,0,0	1/1:12,0:12:10.50:308,11,0	1/1:24,0:4:1.52:5,2,0	0/1:28,0:6:13.92:14,0,71	1/1:22,1:23:4.35:28,4,0	1/1:25,0:24:9.49:106,9,0	0/1:29,0:29:27.75:47,0,28	0/0:24,0:19:16.41:0,16,137	0/0:33,0:33:64.10:0,64,1990	0/1:31,0:31:38.94:713,0,39	1/1:12,0:12:0.89:2,1,0	0/0:37,0:36:87.18:0,87,2671	0/0:25,0:25:60.02:0,60,1666	0/1:36,0:31:4.50:206,0,4	0/1:26,0:25:32.86:46,0,33	1/1:24,0:22:2.84:167,3,0	0/1:26,0:25:8.06:8,0,23	0/1:24,2:25:21.84:425,0,22	1/1:29,0:27:29.12:261,29,0	1/1:18,1:19:5.90:37,6,0	1/1:84,1:82:11.88:131,12,0	0/0:23,0:23:51.03:0,51,1616	0/0:18,0:18:37.91:0,38,1142	0/0:63,0:63:99:0,138,4524	1/1:29,2:30:7.26:104,7,0	1/1:24,2:26:50.92:660,51,0	1/1:10,1:10:11.25:169,11,0	1/1:20,3:23:53.97:641,54,0
chr10	76494881	.	TGTGTGC	T	4259.11	PASS	AB=0.933;AC=28;AF=0.500;AN=56;BaseQRankSum=10.344;DP=775;FS=5.946;HRun=0;HaplotypeScore=233.6873;InbreedingCoeff=0.1957;MQ=46.21;MQ0=18;MQRankSum=-7.593;QD=8.07;ReadPosRankSum=0.274;VQSLOD=3.1232;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:0.08:0,0,0	0/1:12,0:12:8.32:139,0,8	0/1:22,0:4:0.93:1,0,11	0/1:27,0:7:20.56:21,0,40	1/1:5,18:23:5.68:38,6,0	0/1:25,0:24:24.13:50,0,24	0/1:29,0:29:17.21:17,0,56	0/0:21,0:17:16.97:0,17,151	0/0:34,0:34:81.17:0,81,2007	0/1:31,0:31:99:285,0,206	1/1:12,0:12:0.47:1,0,0	0/0:38,0:37:99:0,102,2595	0/0:26,0:26:72.09:0,72,1766	0/1:36,0:31:25.72:100,0,26	0/1:26,0:25:13.94:14,0,43	0/1:23,0:21:0:69,0,0	0/0:26,0:26:4.20:0,4,22	1/1:22,3:24:13.95:595,14,0	1/1:11,15:24:21.75:478,22,0	0/1:5,14:19:25.51:28,0,26	0/1:31,52:80:76.37:232,0,76	0/0:23,0:23:60.01:0,60,1550	0/0:16,0:16:40.91:0,41,1001	0/0:62,0:62:99:0,159,4163	1/1:4,25:28:7.27:139,7,0	1/1:9,17:26:57.63:897,58,0	1/1:2,9:11:14.61:240,15,0	1/1:10,13:23:40.71:915,41,0
chr10	76494887	.	CGTGT	C	1596.51	PASS	AB=0.962;AC=21;AF=0.375;AN=56;BaseQRankSum=12.706;DP=758;FS=1.570;HRun=0;HaplotypeScore=227.0151;InbreedingCoeff=0.0534;MQ=46.01;MQ0=16;MQRankSum=-7.888;QD=3.59;ReadPosRankSum=4.852;VQSLOD=2.5188;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,6:23:0.01:0,0,0	0/1:12,0:12:9.34:188,0,9	0/0:22,0:5:11.67:0,12,94	0/0:23,0:9:23.30:0,23,232	0/0:21,0:22:5.25:0,5,29	1/1:22,0:21:5.64:65,6,0	0/1:21,4:25:21.91:22,0,114	0/0:27,0:24:63.20:0,63,552	0/0:35,0:35:93.24:0,93,1812	0/1:34,0:34:99:455,0,233	0/1:13,0:13:0:0,0,0	0/0:43,0:42:99:0,117,2450	0/0:27,0:27:75.21:0,75,1603	1/1:34,0:31:2.43:156,2,0	0/1:21,0:20:19.07:19,0,73	0/1:20,3:22:40.13:137,0,40	0/1:23,1:23:35.20:35,0,61	0/1:23,0:22:97.06:105,0,97	0/1:24,0:22:50.51:51,0,131	0/0:18,0:18:3:0,3,25	0/1:79,0:76:3.08:3,0,128	0/0:20,0:20:57.19:0,57,1340	0/0:15,0:15:42.14:0,42,904	0/0:61,0:61:99:0,157,3578	1/1:28,0:28:7.25:58,7,0	0/1:26,0:26:36.03:178,0,36	0/1:11,0:10:5.02:60,0,5	1/1:23,0:23:14.46:228,14,0
chr10	76494895	.	CGT	C	3132.55	PASS	AB=0.937;AC=24;AF=0.444;AN=54;BaseQRankSum=11.384;DP=731;FS=0.880;HRun=0;HaplotypeScore=198.3929;InbreedingCoeff=0.5694;MQ=48.03;MQ0=13;MQRankSum=-8.485;QD=8.75;ReadPosRankSum=0.821;VQSLOD=3.4666;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,2:21:6.47:64,6,0	1/1:0,11:11:21.06:240,21,0	0/0:28,0:11:30.09:0,30,499	0/0:23,0:14:32.34:0,32,446	0/0:23,0:23:2.47:0,2,52	1/1:0,20:19:5.90:71,6,0	1/1:6,16:22:15.52:196,16,0	1/1:4,23:25:66.01:884,66,0	0/0:36,0:36:99:0,99,1592	1/1:0,28:28:81.24:993,81,0	./.	0/0:46,0:46:99:0,120,2005	0/0:26,0:26:69.19:0,69,1114	1/1:2,27:26:15.04:171,15,0	1/1:5,14:19:17.87:214,18,0	1/1:3,17:20:15.93:183,16,0	1/1:15,10:24:3.37:147,3,0	0/1:21,1:21:5.24:5,0,377	0/1:17,0:15:16.09:16,0,265	0/0:17,0:17:9.03:0,9,121	0/1:66,1:68:21.51:22,0,236	0/0:23,0:23:69.19:0,69,1109	0/0:19,0:19:54.15:0,54,857	0/0:59,0:59:99:0,153,2522	0/0:28,0:28:10.61:0,11,162	0/1:22,2:27:99:120,0,335	0/0:11,0:10:0.72:0,1,58	0/0:18,0:22:6.44:0,6,194
chr10	76495812	.	AGACTAT	A	2435.75	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.371;DP=712;FS=2.178;HRun=0;HaplotypeScore=142.2814;InbreedingCoeff=0.9719;MQ=74.30;MQ0=0;MQRankSum=-10.067;QD=48.71;ReadPosRankSum=-1.626;VQSLOD=3.3570;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,42:50:99:2531,108,0	0/0:10,0:10:27.09:0,27,868	0/0:11,0:11:18.06:0,18,567	0/0:14,0:14:21.04:0,21,599	0/0:23,0:23:69.20:0,69,2212	0/0:30,0:30:90.31:0,90,3136	0/0:27,0:27:78.27:0,78,2724	0/0:28,0:28:78.26:0,78,2464	0/0:21,0:21:63.22:0,63,2171	0/0:34,0:34:99:0,99,3460	0/0:14,0:14:42.14:0,42,1416	0/0:30,0:30:87.30:0,87,2937	0/0:25,0:25:72.25:0,72,2441	0/0:20,0:20:60.21:0,60,2042	0/0:38,0:38:99:0,111,3820	0/0:28,0:28:84.29:0,84,2873	0/0:36,0:36:99:0,108,3747	0/0:15,0:15:39.13:0,39,1348	0/0:27,0:27:78.26:0,78,2528	0/0:25,0:25:69.24:0,69,2394	0/0:48,0:48:99:0,138,4480	0/0:29,0:29:84.29:0,84,2992	0/0:18,0:18:54.16:0,54,1690	0/0:31,0:31:90.31:0,90,3001	0/0:26,0:26:75.24:0,75,2486	0/0:31,0:31:90.31:0,90,3047	0/0:18,0:18:54.19:0,54,1890	0/0:5,0:5:15.05:0,15,511
chr10	76496999	.	GC	G	9988.44	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=16.239;DP=711;FS=41.943;HRun=1;HaplotypeScore=72.3006;InbreedingCoeff=0.9829;MQ=74.18;MQ0=0;MQRankSum=0.189;QD=37.84;ReadPosRankSum=0.372;VQSLOD=1.9617;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1869	1/1:0,14:14:36.12:499,36,0	0/0:15,1:16:33.11:0,33,507	0/0:15,0:15:5.56:0,6,259	0/0:20,0:20:57.19:0,57,909	1/1:0,21:21:57.19:791,57,0	1/1:0,23:23:63.21:881,63,0	1/1:0,32:32:90.29:1239,90,0	0/0:37,0:37:99:0,111,1749	1/1:0,26:26:75.25:1048,75,0	1/1:0,13:13:36.12:503,36,0	0/0:40,0:40:99:0,120,1889	0/0:17,0:17:51.16:0,51,792	1/1:0,28:28:75.25:1048,75,0	1/1:0,41:41:99:1510,108,0	1/1:1,30:31:36.33:1084,36,0	1/1:0,35:35:99:1384,99,0	0/0:19,0:19:57.15:0,57,883	0/0:28,0:28:81.28:0,81,1293	0/0:23,0:23:69.22:0,69,1080	0/0:29,0:29:87.28:0,87,1363	0/0:16,0:16:48.16:0,48,767	0/0:18,0:18:48.16:0,48,766	0/0:34,0:34:99:0,102,1574	0/0:14,0:14:42.13:0,42,646	0/0:22,1:23:27.27:0,27,1013	0/0:37,0:37:99:0,111,1748	0/0:21,0:21:63.21:0,63,1007
chr10	76497267	.	AG	A	2625.87	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=11.116;DP=363;FS=2.715;HRun=9;HaplotypeScore=52.9609;InbreedingCoeff=0.9198;MQ=69.64;MQ0=3;MQRankSum=1.445;QD=15.72;ReadPosRankSum=1.519;VQSLOD=3.7709;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:24:38.10:112,38,0	1/1:0,8:8:15.01:137,15,0	0/0:20,0:9:12.76:0,13,129	0/0:11,0:5:5.99:0,6,53	0/0:16,0:16:39.10:0,39,431	1/1:2,24:26:54.03:493,54,0	1/1:1,6:7:17.98:157,18,0	1/1:7,11:19:32.85:277,33,0	0/0:7,0:7:21.06:0,21,238	1/1:4,11:15:32.23:287,32,0	1/1:0,14:14:29.94:264,30,0	0/0:10,0:10:27.05:0,27,290	0/0:5,0:5:15.04:0,15,173	1/1:4,10:14:27:247,27,0	1/1:0,4:4:9:82,9,0	1/1:1,11:12:27.01:247,27,0	1/1:3,21:24:60:542,60,0	0/0:24,0:24:60.13:0,60,660	0/0:4,0:4:12.03:0,12,131	0/0:8,0:8:15.03:0,15,164	0/0:16,0:16:45.01:0,45,468	0/0:1,0:2:3.01:0,3,34	0/0:3,0:3:6.01:0,6,60	0/0:9,0:9:27.07:0,27,302	0/0:10,0:11:29.70:0,30,278	0/0:20,0:20:48.03:0,48,528	0/0:12,0:12:33.10:0,33,381	0/0:18,0:16:36.07:0,36,386
chr10	76497548	.	G	GA	413.59	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=6.663;DP=352;FS=6.741;HRun=8;HaplotypeScore=95.4456;InbreedingCoeff=0.4682;MQ=55.28;MQ0=23;MQRankSum=-3.130;QD=6.17;ReadPosRankSum=-1.870;VQSLOD=0.5434;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:39.44:482,39,0	0/0:6,0:6:3:0,3,27	1/1:18,1:8:4.32:35,4,0	0/1:23,0:7:12.59:13,0,41	0/0:20,0:19:23.98:0,24,213	0/0:9,0:9:8.92:0,9,82	0/0:10,0:9:14.78:0,15,132	0/0:15,0:13:19.97:0,20,181	0/0:8,0:9:22.82:0,23,197	0/0:16,0:15:23.80:0,24,211	0/0:12,0:11:20.67:0,21,191	0/0:4,0:4:5.99:0,6,55	0/0:7,0:7:11.98:0,12,105	0/0:12,0:11:20.44:0,20,191	0/0:5,0:5:12:0,12,109	0/0:6,0:6:0.51:0,1,24	0/0:25,0:24:44.67:0,45,427	0/0:20,0:18:14:0,14,116	0/0:17,0:16:32.91:0,33,287	0/0:8,0:8:11.98:0,12,105	0/0:10,0:8:20.99:0,21,187	0/0:3,0:3:6:0,6,55	0/0:12,0:11:27.01:0,27,247	0/0:21,0:20:29.98:0,30,274	0/0:8,0:8:12:0,12,110	0/0:10,0:10:25.54:0,26,207	0/0:5,0:5:9:0,9,82	0/0:15,0:13:12:0,12,110
chr10	76497561	.	G	GAA	3209.99	PASS	AB=0.900;AC=20;AF=0.357;AN=56;BaseQRankSum=2.798;DP=423;FS=1.685;HRun=9;HaplotypeScore=109.0293;InbreedingCoeff=0.8002;MQ=56.59;MQ0=21;MQRankSum=-5.563;QD=18.66;ReadPosRankSum=-2.359;VQSLOD=2.0205;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:18.60:0,19,113	1/1:3,4:7:12.04:170,12,0	0/0:39,0:13:23.70:0,24,213	0/1:41,0:14:50.25:50,0,145	0/0:18,0:18:31.41:0,31,275	1/1:6,10:15:39.05:532,39,0	1/1:7,4:12:23.54:300,24,0	1/1:7,6:13:21.07:292,21,0	0/0:10,0:10:24.03:0,24,246	1/1:6,9:16:35.60:495,36,0	1/1:4,11:14:27.07:383,27,0	0/0:6,0:6:18.03:0,18,182	0/0:7,0:7:18.03:0,18,191	1/1:8,4:12:24:317,24,0	1/1:2,4:6:17.55:231,18,0	0/1:6,2:8:44.95:146,0,45	1/1:12,11:23:36.11:505,36,0	0/0:18,0:16:30.93:0,31,265	0/0:23,0:22:60.04:0,60,602	0/0:9,0:9:18.01:0,18,170	0/0:7,0:7:8.74:0,9,95	0/0:3,0:3:9.02:0,9,96	0/0:14,0:14:39.07:0,39,401	0/0:20,0:19:50.92:0,51,523	0/0:11,0:11:14.94:0,15,132	0/0:14,0:15:27.43:0,27,269	0/0:4,0:4:7.09:0,7,91	0/0:21,0:19:29.97:0,30,281
chr10	76497568	.	AAAC	A	729.94	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=6.369;DP=458;FS=2.814;HRun=0;HaplotypeScore=124.0831;InbreedingCoeff=0.5520;MQ=54.56;MQ0=22;MQRankSum=-2.190;QD=9.48;ReadPosRankSum=3.049;VQSLOD=3.1765;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:58.34:817,58,0	0/0:6,0:6:12.04:0,12,201	0/0:48,0:14:28.01:0,28,414	0/1:51,0:16:17.84:18,0,366	0/0:20,0:20:35.84:0,36,655	0/0:18,0:15:39.13:0,39,671	0/0:12,0:12:26.11:0,26,381	0/0:17,0:16:38.83:0,39,512	0/0:9,0:9:24.08:0,24,536	0/0:17,0:17:41.55:0,42,542	0/0:14,0:12:25.06:0,25,279	0/0:7,0:7:18.06:0,18,397	0/0:8,0:8:19.63:0,20,467	0/0:11,0:10:23.72:0,24,346	0/0:6,0:6:17.98:0,18,212	0/0:9,0:9:20.98:0,21,324	0/0:21,0:21:52.83:0,53,582	0/0:17,0:15:6.49:0,6,529	0/0:29,0:28:63.15:0,63,1428	0/0:12,0:12:29.68:0,30,463	0/0:6,0:6:11.96:0,12,223	0/0:4,0:4:12.02:0,12,227	0/0:14,0:14:42.14:0,42,888	0/0:20,0:20:54.14:0,54,1141	0/0:13,0:13:21.06:0,21,411	0/0:16,0:16:44.47:0,44,794	0/0:5,0:5:14.98:0,15,258	0/0:21,0:19:33.11:0,33,709
chr10	76497572	.	C	CAAAA	3966.67	PASS	AB=0.972;AC=20;AF=0.357;AN=56;BaseQRankSum=-1.634;DP=471;FS=0.000;HRun=12;HaplotypeScore=130.6367;InbreedingCoeff=0.6641;MQ=53.33;MQ0=20;MQRankSum=-1.872;QD=17.32;ReadPosRankSum=-1.317;VQSLOD=1.3574;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:76.89:77,0,83	0/0:7,0:7:7.69:0,8,94	0/0:51,0:14:11.44:0,11,89	0/1:52,0:17:7.78:8,0,69	1/1:7,11:21:27.91:452,28,0	0/0:19,0:16:25.67:0,26,244	0/0:11,0:11:24.46:0,24,166	0/0:17,0:16:7.85:0,8,161	0/0:9,0:10:20.78:0,21,230	0/0:16,0:16:5.04:0,5,145	0/0:15,0:13:14.57:0,15,124	0/0:7,0:7:8.89:0,9,118	0/0:8,0:8:20.96:0,21,251	0/0:9,0:8:6.79:0,7,121	0/1:7,0:8:9.33:9,0,55	0/0:9,0:9:20.47:0,20,182	0/0:21,0:21:19.12:0,19,175	1/1:14,3:17:9.07:568,9,0	1/1:24,5:28:52.70:700,53,0	1/1:3,6:11:24.03:431,24,0	0/1:5,0:5:0:0,0,0	0/0:4,0:4:12.04:0,12,150	0/0:15,0:16:38.99:0,39,495	0/0:20,0:21:44.14:0,44,501	1/1:2,10:13:15.05:276,15,0	1/1:3,12:18:48.08:805,48,0	1/1:2,1:7:9.03:169,9,0	1/1:3,14:20:24.08:471,24,0
chr10	76497579	.	AAAAAAC	A	957.73	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=3.801;DP=478;FS=2.223;HRun=0;HaplotypeScore=154.3628;InbreedingCoeff=0.2061;MQ=53.09;MQ0=21;MQRankSum=-2.427;QD=10.08;ReadPosRankSum=-0.753;VQSLOD=2.9462;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,21:28:56.81:1031,57,0	0/0:9,0:9:0.17:0,0,291	0/0:50,0:13:16.21:0,16,167	0/0:53,0:18:27.81:0,28,258	0/0:23,0:23:14.17:0,14,373	0/0:19,0:16:42.07:0,42,827	0/0:14,0:14:2.40:0,2,494	0/1:20,0:18:19.05:19,0,454	0/0:12,0:12:36.10:0,36,828	0/0:16,0:16:0.91:0,1,572	0/0:13,0:12:20.96:0,21,346	0/0:7,0:7:18:0,18,376	0/0:7,0:7:21.07:0,21,630	0/0:10,0:9:16.90:0,17,428	0/0:9,0:9:20.65:0,21,252	0/0:9,0:9:21.07:0,21,542	0/0:20,0:20:53.65:0,54,724	0/0:18,0:17:21.82:0,22,692	0/1:30,0:27:11.50:12,0,482	0/0:10,0:10:26.29:0,26,477	0/0:5,0:5:9.01:0,9,127	0/0:4,0:4:12.04:0,12,345	0/0:14,0:14:42.14:0,42,1273	0/0:19,0:19:48.15:0,48,1227	0/0:15,0:15:13.64:0,14,316	0/1:17,0:17:15.16:15,0,273	0/0:7,0:7:9.10:0,9,154	0/0:20,0:20:32.81:0,33,588
chr10	76497585	.	CAA	C	857.30	PASS	AB=0.896;AC=11;AF=0.196;AN=56;BaseQRankSum=4.732;DP=427;FS=14.590;HRun=12;HaplotypeScore=122.9059;InbreedingCoeff=-0.0170;MQ=47.63;MQ0=15;MQRankSum=-1.924;QD=5.64;ReadPosRankSum=-2.160;VQSLOD=-0.7334;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:27:11.93:97,12,0	0/1:7,1:8:12.97:83,0,13	0/0:36,0:9:2.27:0,2,97	0/0:42,0:13:6.47:0,6,131	0/0:18,0:18:22.54:0,23,450	0/1:18,0:15:12.88:13,0,18	0/1:12,2:14:33.94:157,0,34	0/1:11,4:14:7.20:128,0,7	0/0:11,0:11:33.09:0,33,567	0/1:14,4:17:74.59:123,0,75	0/1:11,1:11:38.43:64,0,38	0/0:5,0:5:12.04:0,12,232	0/0:7,0:7:21.07:0,21,380	0/1:10,0:9:29.96:30,0,56	0/1:7,3:10:14.44:147,0,14	0/0:8,0:8:10.50:0,10,133	0/1:18,0:19:21.05:167,0,21	0/0:18,0:17:43.65:0,44,565	0/0:28,0:25:52.98:0,53,679	0/0:10,0:10:24.08:0,24,379	0/0:5,0:5:11.49:0,11,154	0/0:6,0:6:18.02:0,18,298	0/0:15,0:15:45.10:0,45,821	0/0:17,0:17:45.01:0,45,722	0/0:13,0:13:18.15:0,18,341	0/0:16,0:16:40.57:0,41,469	0/0:7,0:7:15.04:0,15,207	0/0:12,0:12:24.06:0,24,362
chr10	76497597	.	AAAC	A	303.86	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.492;DP=450;FS=2.053;HRun=0;HaplotypeScore=140.7538;InbreedingCoeff=0.7404;MQ=49.32;MQ0=16;MQRankSum=-4.778;QD=10.85;ReadPosRankSum=1.606;VQSLOD=3.4028;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,4:27:4.16:382,4,0	0/0:8,0:8:24.08:0,24,502	0/0:34,0:14:31.06:0,31,372	0/0:50,0:18:22.92:0,23,257	0/0:19,0:19:36.08:0,36,707	0/0:18,0:15:42.14:0,42,814	0/0:16,0:16:45.02:0,45,857	0/0:18,0:16:38.72:0,39,557	0/0:12,0:12:35.71:0,36,714	0/0:18,0:17:46.96:0,47,792	0/0:13,0:12:24.04:0,24,407	0/0:6,0:6:15.04:0,15,259	0/0:7,0:7:21.07:0,21,399	0/0:12,0:11:28.91:0,29,498	0/0:11,0:10:31.62:0,32,559	0/0:10,0:10:27.09:0,27,548	0/0:25,0:25:51.75:0,52,838	0/0:17,0:16:48.13:0,48,827	0/0:20,0:18:51.13:0,51,954	0/0:12,0:12:30.10:0,30,616	0/0:7,0:7:9.27:0,9,300	0/0:8,0:8:16.29:0,16,334	0/0:16,0:16:47.75:0,48,933	0/0:13,0:13:30.10:0,30,640	0/0:14,0:14:26.56:0,27,475	0/0:16,0:16:43.74:0,44,745	0/0:9,0:9:20.86:0,21,358	0/0:12,0:12:20.70:0,21,424
chr10	76497604	.	AC	A	150.87	PASS	AB=0.875;AC=3;AF=0.054;AN=56;BaseQRankSum=4.751;DP=439;FS=3.493;HRun=1;HaplotypeScore=125.9877;InbreedingCoeff=0.6439;MQ=54.32;MQ0=14;MQRankSum=-3.007;QD=4.71;ReadPosRankSum=-0.593;VQSLOD=0.1278;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,13:24:19.06:241,19,0	0/0:8,0:8:24.08:0,24,331	0/0:32,0:16:27.45:0,27,375	0/0:47,0:21:29.80:0,30,342	0/0:18,0:18:36.01:0,36,479	0/0:17,0:15:42.09:0,42,512	0/0:16,0:16:36.98:0,37,536	0/0:15,0:13:32.65:0,33,381	0/0:15,0:15:45.11:0,45,599	0/0:17,0:16:45.80:0,46,498	0/0:10,0:10:16.16:0,16,251	0/0:5,0:5:12.04:0,12,161	0/0:7,0:7:21.05:0,21,259	0/0:11,0:10:26.01:0,26,312	0/0:12,0:11:24.62:0,25,332	0/0:10,0:10:27.07:0,27,364	0/0:23,0:23:38.38:0,38,465	0/0:18,0:17:49:0,49,572	0/0:21,0:19:54.14:0,54,740	0/0:11,0:11:30.09:0,30,407	0/0:10,0:10:25.90:0,26,355	0/1:6,1:7:8.27:8,0,201	0/0:17,0:17:50.65:0,51,694	0/0:14,0:14:32.96:0,33,425	0/0:14,0:14:26.95:0,27,351	0/0:18,0:18:43.71:0,44,574	0/0:10,0:10:27.05:0,27,350	0/0:10,0:10:21.06:0,21,275
chr10	76497607	.	AAACAAAAC	A	1252.08	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=3.127;DP=444;FS=7.466;HRun=0;HaplotypeScore=174.1525;InbreedingCoeff=0.0460;MQ=61.12;MQ0=13;MQRankSum=-5.758;QD=9.49;ReadPosRankSum=-1.788;VQSLOD=1.9317;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,13:26:52.96:955,53,0	0/0:8,0:8:19.95:0,20,388	0/0:30,0:16:38.96:0,39,773	0/0:48,0:23:45.70:0,46,702	0/0:19,0:19:38.99:0,39,1011	0/0:17,0:15:39.13:0,39,931	0/1:17,0:17:54.43:54,0,665	0/1:14,0:12:99:107,0,264	0/0:15,0:15:45.15:0,45,1471	0/1:17,0:16:25.73:26,0,478	0/1:10,0:10:49.25:49,0,280	0/0:5,0:5:12.04:0,12,459	0/0:7,0:7:18.04:0,18,612	0/1:12,0:11:33.33:33,0,438	0/1:12,0:11:99:100,0,238	0/0:11,0:11:18.21:0,18,711	0/1:23,0:23:73.84:74,0,524	0/0:18,0:17:51.11:0,51,1185	0/0:21,0:20:58.95:0,59,1357	0/0:11,0:11:30.09:0,30,877	0/0:11,0:11:0.83:0,1,461	0/0:7,0:7:18.03:0,18,537	0/0:16,0:16:48.16:0,48,1799	0/0:12,0:12:33.11:0,33,1232	0/0:15,0:15:33:0,33,757	0/0:18,0:18:47.92:0,48,1124	0/0:10,0:10:26.98:0,27,561	0/0:13,0:13:29.98:0,30,763
chr10	76497610	.	C	CAA	3595.26	PASS	AB=0.700;AC=19;AF=0.339;AN=56;BaseQRankSum=5.573;DP=445;FS=6.397;HRun=4;HaplotypeScore=123.3527;InbreedingCoeff=0.6687;MQ=62.01;MQ0=9;MQRankSum=-7.409;QD=20.90;ReadPosRankSum=0.818;VQSLOD=0.9852;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:24:35.93:101,0,36	1/1:1,7:8:21.54:359,22,0	0/0:27,0:15:39.13:0,39,507	0/0:44,0:22:44.36:0,44,512	0/0:19,0:19:29.43:0,29,207	1/1:11,4:14:13.92:197,14,0	0/1:10,8:18:21.53:435,0,22	1/1:7,8:13:30.03:389,30,0	0/0:16,0:16:44.93:0,45,563	1/1:12,6:17:25.61:409,26,0	1/1:6,2:10:20.89:223,21,0	0/0:6,0:6:12.04:0,12,160	0/0:6,0:6:15.01:0,15,173	1/1:9,4:13:8.54:148,9,0	1/1:6,7:12:29.89:455,30,0	0/1:4,8:12:67.61:223,0,68	1/1:6,17:24:26.29:656,26,0	0/0:20,0:19:0.49:0,0,215	0/0:21,0:21:46.26:0,46,266	0/0:11,0:11:23.71:0,24,169	0/0:9,0:10:6.95:0,7,144	0/0:7,0:7:15.05:0,15,198	0/0:16,0:16:48.14:0,48,621	0/0:12,0:12:32.42:0,32,383	0/0:16,0:16:29.73:0,30,176	0/0:17,0:17:36.43:0,36,259	0/0:12,0:12:3.64:0,4,149	0/0:13,0:13:23.70:0,24,173
chr10	76497613	.	AAC	A	933.13	PASS	AB=0.978;AC=20;AF=0.357;AN=56;BaseQRankSum=4.450;DP=446;FS=0.000;HRun=0;HaplotypeScore=130.2778;InbreedingCoeff=0.3396;MQ=65.89;MQ0=6;MQRankSum=-4.557;QD=4.15;ReadPosRankSum=-4.189;VQSLOD=0.6784;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:26:50.12:375,50,0	0/1:8,0:8:0.40:0,0,6	0/0:28,0:18:48.12:0,48,645	0/0:38,0:22:44.64:0,45,597	0/1:18,0:18:10.06:10,0,209	0/1:15,0:14:5.83:17,0,6	0/1:16,2:18:49.66:50,0,72	1/1:16,2:16:20.43:209,20,0	0/0:18,0:18:54.04:0,54,817	1/1:15,2:16:9.69:98,10,0	1/1:9,1:10:5.89:60,6,0	0/0:6,0:6:15.05:0,15,246	0/0:6,0:6:18.06:0,18,267	1/1:12,1:12:4.63:30,5,0	1/1:11,3:14:6.29:113,6,0	0/1:13,0:13:14.39:14,0,119	0/1:22,2:24:28.06:107,0,28	0/1:19,0:19:15.68:16,0,262	0/0:20,0:20:40.24:0,40,298	0/0:11,0:11:23.95:0,24,206	0/1:11,0:11:12.72:13,0,156	0/0:7,0:7:14.98:0,15,225	0/0:17,0:17:51.14:0,51,828	0/0:12,0:12:25.59:0,26,484	0/0:16,0:16:29.96:0,30,202	0/0:17,0:17:15.66:0,16,267	0/0:12,0:12:3.16:0,3,165	0/0:13,0:13:6.93:0,7,176
chr10	76498077	.	GT	G	152.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.643;DP=411;FS=0.000;HRun=9;HaplotypeScore=53.8653;InbreedingCoeff=0.7916;MQ=68.10;MQ0=8;MQRankSum=0.070;QD=10.89;ReadPosRankSum=-0.119;VQSLOD=1.9966;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,11:12:27.01:246,27,0	0/0:3,0:3:6.01:0,6,60	0/0:25,0:13:17.65:0,18,196	0/0:17,0:11:18.51:0,19,193	0/0:11,0:11:33.09:0,33,372	0/0:11,0:12:35.94:0,36,390	0/0:27,0:27:63.13:0,63,702	0/0:19,0:19:54.15:0,54,609	0/0:16,0:16:36.11:0,36,415	0/0:12,0:12:24.07:0,24,277	0/0:10,1:12:8.46:0,8,324	0/0:19,0:19:50.97:0,51,515	0/0:8,0:8:18.04:0,18,199	0/0:15,0:15:36.11:0,36,415	0/0:18,0:18:27.06:0,27,300	0/0:10,0:10:20.89:0,21,222	0/0:23,0:23:60.13:0,60,658	0/0:13,0:13:24.03:0,24,262	0/0:15,0:15:33.10:0,33,379	0/0:7,0:7:18.04:0,18,198	0/0:21,1:22:48.10:0,48,539	0/0:6,0:6:15.02:0,15,161	0/0:9,0:9:21.01:0,21,219	0/0:31,0:32:84.07:0,84,935	0/0:15,0:15:36.09:0,36,406	0/0:15,1:16:17.66:0,18,457	0/0:5,0:5:15:0,15,158	0/0:10,0:10:28.33:0,28,315
chr10	76498090	.	TAC	T	508.18	PASS	AB=0.883;AC=17;AF=0.327;AN=52;BaseQRankSum=-0.199;DP=429;FS=0.000;HRun=0;HaplotypeScore=61.8568;InbreedingCoeff=0.1676;MQ=60.98;MQ0=20;MQRankSum=0.866;QD=3.26;ReadPosRankSum=1.301;VQSLOD=1.7108;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:16:11.95:0,12,107	0/0:4,0:4:3:0,3,25	./.	./.	1/1:8,3:11:6.01:65,6,0	0/0:15,0:15:9.01:0,9,94	0/0:20,0:25:17.99:0,18,170	0/0:22,0:18:4.26:0,4,40	0/0:15,0:15:6.02:0,6,80	0/0:10,0:10:12.02:0,12,133	0/0:13,0:13:9:0,9,93	0/0:13,0:14:18.49:0,18,189	0/0:7,0:7:11.98:0,12,114	0/0:18,0:18:17.98:0,18,180	0/0:9,0:16:9.02:0,9,101	0/0:7,0:12:11.99:0,12,117	0/1:19,1:29:10.92:11,0,154	0/1:8,5:14:10.14:96,0,10	1/1:12,2:13:0.85:47,1,0	0/1:4,0:5:13.78:14,0,15	0/1:19,5:24:27.37:96,0,27	1/1:6,0:5:2.90:16,3,0	0/1:8,1:9:23.39:23,0,38	0/0:34,1:35:0.58:0,1,323	1/1:9,4:13:15.04:162,15,0	0/1:15,1:16:26.40:26,0,38	1/1:4,1:6:9.01:89,9,0	0/1:8,0:8:14.97:19,0,15
chr10	76498287	.	CCG	C	1199.57	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=5.656;DP=236;FS=39.328;HRun=0;HaplotypeScore=39.2309;InbreedingCoeff=0.7638;MQ=69.05;MQ0=0;MQRankSum=-2.020;QD=10.81;ReadPosRankSum=-6.681;VQSLOD=0.6827;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:16,2:18:15.80:135,16,0	1/1:1,0:1:3:27,3,0	0/0:12,0:8:5.82:0,6,207	0/0:13,0:13:29.92:0,30,338	0/0:5,0:5:11.99:0,12,118	1/1:9,1:10:23.86:190,24,0	1/1:13,0:13:32.87:265,33,0	1/1:12,0:12:17.15:129,17,0	0/1:8,0:8:6.29:6,0,162	1/1:8,1:9:11.88:89,12,0	0/1:3,0:3:0:0,0,0	0/0:9,0:9:26.87:0,27,286	0/0:10,0:10:26.66:0,27,251	1/1:3,0:3:1.23:3,1,0	1/1:7,0:7:12:105,12,0	1/1:8,0:8:11.96:98,12,0	1/1:19,0:19:41.90:347,42,0	0/0:7,0:7:6.62:0,7,148	0/0:9,0:9:3.94:0,4,226	0/0:5,0:5:11.98:0,12,139	0/0:12,0:12:26.82:0,27,300	0/0:8,0:8:20.97:0,21,217	0/0:4,0:4:9.02:0,9,130	0/0:6,0:6:17.73:0,18,148	0/0:6,0:6:17.96:0,18,209	0/0:9,0:9:21.02:0,21,301	0/0:7,0:6:18.02:0,18,255	0/0:3,0:3:9.02:0,9,120
chr10	76501678	.	AACACAC	A	1480.91	PASS	AB=0.900;AC=17;AF=0.315;AN=54;BaseQRankSum=3.217;DP=580;FS=2.507;HRun=0;HaplotypeScore=126.8229;InbreedingCoeff=0.6894;MQ=73.04;MQ0=10;MQRankSum=-2.171;QD=7.96;ReadPosRankSum=0.419;VQSLOD=2.4833;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:38:3.01:0,3,78	0/0:4,0:6:9.01:0,9,101	0/0:32,0:22:1.25:0,1,3	./.	1/1:11,10:23:12.64:80,13,0	0/0:10,0:19:8.67:0,9,105	0/0:12,0:15:4.22:0,4,42	0/0:18,0:17:12.03:0,12,168	0/0:14,0:15:27.07:0,27,593	0/0:18,0:23:16.38:0,16,222	0/1:16,0:18:38.90:39,0,230	0/0:21,0:23:24.54:0,25,581	0/0:16,0:17:24.07:0,24,622	0/0:15,0:20:20.05:0,20,241	0/0:10,0:23:20.60:0,21,208	0/0:11,0:15:17.08:0,17,224	0/0:9,0:19:20.24:0,20,267	1/1:15,1:17:2.13:41,2,0	0/0:13,0:14:3.37:0,3,48	1/1:12,12:25:19.21:287,19,0	1/1:26,10:35:2.90:16,3,0	0/0:19,0:20:39.13:0,39,993	0/0:14,0:18:36:0,36,802	0/0:20,0:24:31.04:0,31,807	1/1:11,8:20:19.05:345,19,0	1/1:9,18:28:19.91:604,20,0	1/1:10,5:15:6.43:123,6,0	1/1:2,1:4:9.01:126,9,0
chr10	76503332	.	CAT	C	9645.74	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=13.703;DP=634;FS=9.081;HRun=0;HaplotypeScore=91.6811;InbreedingCoeff=0.9230;MQ=73.82;MQ0=1;MQRankSum=-4.793;QD=41.40;ReadPosRankSum=-1.478;VQSLOD=5.7396;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:93.29:0,93,1808	1/1:2,5:7:21.05:309,21,0	0/1:18,0:18:34.12:34,0,395	0/0:17,0:16:36.02:0,36,488	0/0:28,0:28:84.27:0,84,1667	1/1:0,18:18:54.18:874,54,0	1/1:3,21:24:72.23:1123,72,0	1/1:4,26:30:90.19:1382,90,0	0/0:24,0:24:66.19:0,66,1298	1/1:1,26:27:81.28:1304,81,0	1/1:1,11:12:30.10:484,30,0	0/0:25,0:25:75.24:0,75,1484	0/0:21,0:21:63.19:0,63,1206	1/1:2,26:28:72.25:1157,72,0	1/1:3,21:24:69.13:1049,69,0	1/1:0,18:17:51.17:816,51,0	1/1:3,24:27:74.93:1113,75,0	0/0:22,0:22:54.19:0,54,1081	0/0:19,0:19:57.16:0,57,1061	0/0:32,0:32:93.29:0,93,1806	0/0:19,0:19:57.20:0,57,1146	0/0:14,0:14:42.14:0,42,834	0/0:19,0:19:57.16:0,57,1080	0/0:43,0:43:99:0,129,2489	0/0:12,0:12:36.11:0,36,694	0/0:32,1:33:51.22:0,51,1864	0/0:27,0:27:72.21:0,72,1444	0/0:10,0:10:30.10:0,30,609
chr10	76503380	.	G	GT	5732.22	PASS	AB=0.909;AC=21;AF=0.375;AN=56;BaseQRankSum=-2.635;DP=541;FS=8.452;HRun=7;HaplotypeScore=69.0425;InbreedingCoeff=0.9163;MQ=72.18;MQ0=0;MQRankSum=-2.536;QD=27.30;ReadPosRankSum=-2.506;VQSLOD=4.3612;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:75.07:0,75,713	1/1:0,8:8:24.07:290,24,0	0/0:17,0:16:41.98:0,42,388	0/0:17,0:17:35.95:0,36,328	0/0:19,0:19:54.09:0,54,521	1/1:3,7:11:29.99:323,30,0	1/1:5,17:22:57.16:674,57,0	1/1:3,29:33:64.27:1018,64,0	0/0:16,1:17:8.87:0,9,368	1/1:6,21:28:69.06:798,69,0	1/1:0,13:13:39.12:462,39,0	0/0:22,0:22:60.04:0,60,556	0/0:21,0:21:57.08:0,57,549	1/1:2,11:13:36.11:424,36,0	1/1:4,16:20:48.15:576,48,0	1/1:5,13:17:42.08:481,42,0	1/1:4,20:24:57.15:671,57,0	0/0:19,0:19:50.99:0,51,473	0/0:18,0:18:42.06:0,42,403	0/0:21,0:21:48.07:0,48,463	0/0:18,0:18:48.04:0,48,452	0/0:10,0:10:21.01:0,21,198	0/0:18,0:18:42.06:0,42,405	0/0:40,0:40:99:0,108,1018	0/0:14,0:14:42.07:0,42,405	0/1:18,2:20:15.36:15,0,435	0/0:16,0:16:45.01:0,45,419	0/0:15,0:15:42.07:0,42,405
chr10	76503453	.	TCATTGAGC	T	1148.99	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.548;DP=421;FS=9.785;HRun=0;HaplotypeScore=104.6904;InbreedingCoeff=0.9525;MQ=81.12;MQ0=0;MQRankSum=-6.477;QD=47.87;ReadPosRankSum=-2.031;VQSLOD=2.1413;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,18:24:48.16:1244,48,0	0/0:10,0:10:27.09:0,27,1116	0/0:13,0:12:20.90:0,21,764	0/0:16,0:16:39.11:0,39,1353	0/0:8,0:8:18.06:0,18,725	0/0:14,0:14:36.12:0,36,1538	0/0:12,0:12:24.08:0,24,990	0/0:30,0:30:84.28:0,84,3485	0/0:14,0:14:27.09:0,27,1089	0/0:15,0:15:36.12:0,36,1484	0/0:17,0:17:39.13:0,39,1627	0/0:17,0:17:42.14:0,42,1790	0/0:15,0:15:33.11:0,33,1368	0/0:17,0:17:48.16:0,48,1903	0/0:16,0:16:30.10:0,30,1266	0/0:14,0:14:36.12:0,36,1538	0/0:23,0:23:57.20:0,57,2339	0/0:9,0:9:21.07:0,21,843	0/0:15,0:15:36.12:0,36,1410	0/0:8,0:8:21.07:0,21,820	0/0:17,0:17:45.14:0,45,1769	0/0:7,0:7:21.07:0,21,897	0/0:7,0:7:21.07:0,21,843	0/0:25,0:25:69.24:0,69,2823	0/0:11,0:11:33.11:0,33,1351	0/0:19,0:19:54.19:0,54,2223	0/0:16,0:16:48.16:0,48,2049	0/0:12,0:10:15.05:0,15,586
chr10	76503843	.	T	TAC	493.34	PASS	AB=0.873;AC=13;AF=0.271;AN=48;BaseQRankSum=-0.116;DP=485;FS=1.008;HRun=0;HaplotypeScore=75.8760;InbreedingCoeff=0.0928;MQ=57.57;MQ0=8;MQRankSum=0.644;QD=2.74;ReadPosRankSum=-1.799;VQSLOD=1.4270;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:7.78:0,8,118	./.	./.	./.	0/0:15,0:15:5.97:0,6,46	0/1:6,3:9:0:0,0,0	0/1:13,6:19:35.17:35,0,47	./.	0/0:13,0:13:14.23:0,14,127	0/1:15,1:16:35.74:139,0,36	1/1:6,6:12:2.53:44,3,0	0/0:16,0:16:18.03:0,18,185	0/0:9,0:9:9:0,9,88	0/0:11,0:11:5.81:0,6,34	1/1:10,9:19:12.04:171,12,0	0/1:9,7:17:1.88:121,0,2	0/1:18,3:22:69.86:73,0,70	0/1:20,0:19:12.36:12,0,217	0/0:17,0:17:14.86:0,15,137	0/1:10,2:11:14.45:26,0,14	0/0:23,0:22:8.79:0,9,59	0/0:15,0:15:20.75:0,21,178	0/0:15,0:15:6:0,6,56	0/0:44,0:42:43.74:0,44,430	0/0:12,0:12:12.03:0,12,128	0/0:17,0:19:16.74:0,17,149	0/1:12,0:12:5.95:6,0,131	0/1:19,0:18:1.41:1,0,137
chr10	76505197	.	TG	T	5683.26	PASS	AB=1.000;AC=37;AF=0.685;AN=54;BaseQRankSum=-1.185;DP=460;FS=4.775;HRun=9;HaplotypeScore=52.7480;InbreedingCoeff=0.8556;MQ=79.38;MQ0=10;MQRankSum=-1.351;QD=19.01;ReadPosRankSum=5.192;VQSLOD=5.0480;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:9.86:33,0,10	./.	0/0:55,0:25:45.91:0,46,318	0/0:39,0:17:1.35:0,1,53	1/1:7,18:25:59.78:516,60,0	1/1:2,17:19:42.01:384,42,0	1/1:2,19:21:48.02:438,48,0	1/1:5,15:20:44.96:396,45,0	0/0:13,0:13:27.07:0,27,299	1/1:4,8:12:20.97:181,21,0	1/1:4,9:13:26.88:228,27,0	0/0:5,0:5:12.02:0,12,128	0/0:13,0:13:36.07:0,36,391	1/1:1,4:5:9:82,9,0	1/1:3,17:20:36.02:329,36,0	1/1:3,11:14:33.02:301,33,0	1/1:3,23:26:60.03:547,60,0	1/1:3,8:11:27.01:246,27,0	1/1:5,9:13:20.93:179,21,0	1/1:2,9:11:26.93:236,27,0	1/1:2,5:7:15.01:137,15,0	0/0:6,0:6:12.03:0,12,128	0/0:21,0:21:22.08:0,22,434	0/0:8,0:8:15.04:0,15,171	1/1:3,13:16:33.02:301,33,0	1/1:4,9:13:27.01:247,27,0	1/1:3,22:25:69.02:629,69,0	1/1:0,14:14:30.02:273,30,0
chr10	76506423	.	G	GACAC	1244.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.552;DP=871;FS=15.995;HRun=0;HaplotypeScore=184.3816;InbreedingCoeff=0.9267;MQ=66.14;MQ0=13;MQRankSum=-1.118;QD=30.36;ReadPosRankSum=-0.851;VQSLOD=2.1222;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,29:41:56.93:1340,57,0	0/0:5,0:5:9.02:0,9,124	0/0:73,0:37:15.95:0,16,351	0/0:69,0:37:19.54:0,20,265	0/0:22,0:22:48.12:0,48,743	0/0:24,0:24:48.13:0,48,736	0/0:39,0:39:90.18:0,90,1344	0/0:27,0:27:42.20:0,42,859	0/0:32,0:35:84.23:0,84,1269	0/0:28,0:28:66.23:0,66,1088	0/0:21,0:21:33.11:0,33,547	0/0:31,0:35:84.07:0,84,1184	0/0:36,0:36:90.31:0,90,1491	0/0:16,0:16:48.14:0,48,739	0/0:29,0:28:75.26:0,75,1236	0/0:35,0:35:69.48:0,69,1225	0/0:40,0:40:99:0,99,1585	0/0:13,0:13:35.81:0,36,525	0/0:24,0:22:36.10:0,36,557	0/0:19,0:19:42.12:0,42,642	0/0:67,0:68:99:0,147,2281	0/0:23,0:24:60.20:0,60,972	0/0:14,0:16:26.42:0,26,505	0/0:22,0:23:55.06:0,55,867	0/0:25,0:26:57.16:0,57,861	0/0:37,0:37:90.29:0,90,1444	0/0:31,0:30:66.16:0,66,1012	0/0:13,0:13:30.08:0,30,470
chr10	76511187	.	CT	C	536.09	PASS	AB=0.790;AC=23;AF=0.411;AN=56;BaseQRankSum=-0.074;DP=512;FS=1.679;HRun=18;HaplotypeScore=98.1648;InbreedingCoeff=0.3335;MQ=64.85;MQ0=13;MQRankSum=2.836;QD=1.85;ReadPosRankSum=3.853;VQSLOD=-0.7041;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:21:18.87:55,19,0	1/1:2,8:11:22.07:114,22,0	0/0:14,0:9:3.40:0,3,18	0/0:13,1:10:5.30:0,5,30	0/0:19,0:19:28.14:0,28,194	1/1:13,2:19:6.21:65,6,0	1/1:12,3:17:12.50:57,12,0	1/1:19,10:30:31.65:157,32,0	0/0:15,0:16:9.15:0,9,130	1/1:11,1:12:6.70:26,7,0	1/1:5,5:12:6.95:35,7,0	0/0:26,0:26:33.11:0,33,256	0/1:17,0:18:21.64:22,0,58	1/1:14,2:15:4.77:27,5,0	0/1:14,12:29:37.30:37,0,61	0/1:5,5:12:23.18:39,0,23	0/1:11,8:19:35.85:36,0,90	0/0:25,0:24:11.57:0,12,171	0/0:20,0:22:3.76:0,4,128	0/0:17,0:17:32.49:0,32,214	0/1:13,4:18:21.76:22,0,75	0/0:10,0:10:2.30:0,2,35	0/0:12,0:8:8.89:0,9,60	0/1:23,2:25:27.20:27,0,111	0/0:14,2:16:14.57:0,15,174	0/0:19,0:20:11.85:0,12,135	0/1:14,2:18:0.57:1,0,77	0/0:8,0:8:8.82:0,9,59
chr10	76514007	.	T	TC	956.06	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.878;DP=518;FS=5.819;HRun=7;HaplotypeScore=55.5960;InbreedingCoeff=0.9483;MQ=85.93;MQ0=0;MQRankSum=-1.318;QD=27.32;ReadPosRankSum=2.993;VQSLOD=4.4622;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:35:87.27:1051,87,0	0/0:4,0:4:12:0,12,109	0/0:29,0:27:60.75:0,61,536	0/0:29,0:28:35.33:0,35,447	0/0:18,0:18:45.06:0,45,430	0/0:19,0:19:51.08:0,51,492	0/0:20,0:20:51.08:0,51,492	0/0:32,0:32:66.05:0,66,625	0/0:16,0:16:45.06:0,45,429	0/0:12,0:12:30.04:0,30,289	0/0:20,0:20:51.08:0,51,492	0/0:19,0:19:51.05:0,51,482	0/0:9,0:9:27.01:0,27,248	0/0:16,0:16:48.07:0,48,459	0/0:12,0:12:33.05:0,33,318	0/0:14,0:13:39.05:0,39,373	0/0:31,0:30:81.11:0,81,776	0/0:24,0:24:66.09:0,66,631	0/0:25,0:25:66.09:0,66,631	0/0:15,0:15:42.04:0,42,393	0/0:21,0:21:59.57:0,60,553	0/0:10,0:10:27.03:0,27,255	0/0:7,0:7:21.03:0,21,199	0/0:18,0:17:48.05:0,48,457	0/0:7,0:7:15.02:0,15,145	0/0:19,0:19:45.07:0,45,435	0/0:27,0:27:72.04:0,72,679	0/0:10,0:10:30.05:0,30,290
chr10	76514213	.	AAAAG	A	71.75	PASS	AB=0.954;AC=10;AF=0.179;AN=56;BaseQRankSum=5.076;DP=467;FS=21.690;HRun=0;HaplotypeScore=76.1645;InbreedingCoeff=0.0996;MQ=61.44;MQ0=40;MQRankSum=-3.572;QD=0.39;ReadPosRankSum=-0.444;VQSLOD=-0.0924;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:35:30.14:127,30,0	0/0:11,0:11:6.29:0,6,147	0/1:49,0:12:5.78:6,0,117	0/1:52,0:20:0.75:1,0,146	0/0:22,0:22:26.48:0,26,310	0/0:15,0:15:19.87:0,20,252	0/0:9,0:8:19.97:0,20,162	0/0:29,0:29:16.97:0,17,478	0/0:11,0:11:19.20:0,19,537	0/0:15,0:13:17.23:0,17,269	0/0:12,0:12:25.53:0,26,258	0/0:11,0:9:23.93:0,24,263	0/0:7,0:7:16.17:0,16,199	0/0:7,0:5:6.47:0,6,68	0/0:14,0:13:1.89:0,2,96	0/1:10,0:9:9.67:10,0,65	0/0:35,0:28:1.22:0,1,429	0/0:20,0:17:26.84:0,27,254	0/0:14,0:12:0.32:0,0,151	0/0:12,0:10:5.93:0,6,134	1/1:3,0:2:2.69:9,3,0	0/0:3,0:3:7.22:0,7,49	0/1:9,0:8:14.57:15,0,74	0/0:8,0:7:17.59:0,18,260	0/0:15,0:15:0.35:0,0,184	0/0:11,0:10:28.38:0,28,231	0/1:8,5:13:18.06:18,0,184	0/1:12,0:7:17.72:18,0,96
chr10	76514527	.	C	CAG	8254.13	PASS	AB=0.827;AC=36;AF=0.643;AN=56;BaseQRankSum=-4.315;DP=663;FS=16.083;HRun=0;HaplotypeScore=120.6729;InbreedingCoeff=0.5013;MQ=71.37;MQ0=11;MQRankSum=-3.060;QD=17.56;ReadPosRankSum=0.676;VQSLOD=3.8868;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:3.07:0,3,14	1/1:15,4:19:8.06:400,8,0	0/1:52,0:28:0.99:1,0,284	0/0:61,0:31:34.44:0,34,325	1/1:21,12:31:11.10:635,11,0	0/1:5,16:21:18.84:227,0,19	1/1:6,18:24:19.96:299,20,0	1/1:9,17:26:17.23:716,17,0	0/0:25,0:25:66.18:0,66,790	1/1:9,23:31:74.50:1013,75,0	1/1:7,11:17:6.01:98,6,0	0/0:13,0:13:39.12:0,39,480	0/0:18,0:18:48.13:0,48,577	1/1:3,13:16:14.08:201,14,0	1/1:11,13:24:2.80:523,3,0	1/1:11,8:19:30.10:489,30,0	1/1:10,6:14:21.07:331,21,0	1/1:13,9:22:42.08:614,42,0	0/1:14,2:13:48.71:155,0,49	0/1:13,5:18:6.82:382,0,7	1/1:9,19:27:24.08:391,24,0	0/0:20,0:20:39.42:0,39,600	0/1:15,0:15:18.26:18,0,234	0/0:36,0:36:87.17:0,87,1035	0/1:8,5:13:24.87:135,0,25	1/1:10,12:21:49.88:687,50,0	1/1:9,10:18:25.40:505,25,0	1/1:4,12:16:27.09:432,27,0
chr10	76514541	.	GAC	G	228.78	PASS	AB=0.993;AC=10;AF=0.179;AN=56;BaseQRankSum=1.649;DP=664;FS=7.093;HRun=0;HaplotypeScore=145.4147;InbreedingCoeff=0.0222;MQ=55.73;MQ0=13;MQRankSum=0.384;QD=0.83;ReadPosRankSum=-7.842;VQSLOD=-0.6027;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:20.91:161,21,0	0/0:16,0:16:4.80:0,5,133	0/1:41,0:17:0.61:1,0,245	0/1:53,0:20:11.29:11,0,260	0/1:36,0:34:33.92:34,0,269	0/0:20,0:19:18.54:0,19,123	0/0:23,0:22:12.81:0,13,132	0/1:35,0:35:37.66:38,0,345	0/0:24,0:24:72.21:0,72,1279	0/1:32,0:31:43.70:44,0,368	0/1:18,0:17:9.84:10,0,57	0/0:18,0:18:42.12:0,42,799	0/0:18,0:18:51.16:0,51,889	0/0:18,0:18:8.73:0,9,127	0/0:24,1:25:22.31:0,22,223	0/0:22,0:21:41.41:0,41,300	0/0:16,0:14:18.29:0,18,174	0/1:25,0:25:43.85:44,0,222	0/0:17,1:15:7.86:0,8,215	0/1:16,1:17:29.29:29,0,138	0/0:29,0:28:22.80:0,23,151	0/0:21,0:21:62.99:0,63,1059	0/0:16,0:16:29.50:0,29,412	0/0:35,0:35:96.13:0,96,1535	0/0:11,0:11:11.70:0,12,133	0/0:23,0:22:35.79:0,36,357	0/0:22,1:21:17.92:0,18,233	0/0:14,0:14:24.26:0,24,198
chr10	76515919	.	CA	C	608.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.850;DP=708;FS=1.733;HRun=7;HaplotypeScore=65.5960;InbreedingCoeff=0.9977;MQ=86.85;MQ0=0;MQRankSum=-2.750;QD=22.55;ReadPosRankSum=1.083;VQSLOD=3.8025;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:69.15:704,69,0	0/0:15,0:15:42.59:0,43,515	0/0:29,0:29:78.23:0,78,945	0/0:18,0:18:36.12:0,36,453	0/0:26,0:26:75.23:0,75,931	0/0:23,0:23:66.20:0,66,817	0/0:22,0:22:63.17:0,63,765	0/0:40,0:40:99:0,102,1263	0/0:34,0:34:96.29:0,96,1194	0/0:36,0:36:99:0,102,1280	0/0:15,0:15:39.10:0,39,460	0/0:27,0:27:72.20:0,72,874	0/0:24,0:24:69.22:0,69,868	0/0:26,0:26:78.24:0,78,969	0/0:34,0:34:90.27:0,90,1119	0/0:34,0:34:99:0,102,1232	0/0:35,0:35:99:0,99,1243	0/0:18,0:18:48.14:0,48,588	0/0:19,0:19:57.13:0,57,647	0/0:17,0:17:48.15:0,48,599	0/0:30,0:30:87.28:0,87,1094	0/0:25,0:25:69.22:0,69,865	0/0:17,0:17:45.14:0,45,566	0/0:24,0:24:72.21:0,72,881	0/0:20,0:20:57.16:0,57,690	0/0:27,0:27:75.22:0,75,921	0/0:37,0:37:99:0,102,1234	0/0:9,0:9:24.08:0,24,302
chr10	76516284	.	GCACA	G	3621.63	PASS	AB=0.833;AC=38;AF=0.704;AN=54;BaseQRankSum=8.567;DP=525;FS=2.821;HRun=0;HaplotypeScore=104.2317;InbreedingCoeff=0.6293;MQ=62.25;MQ0=5;MQRankSum=-4.633;QD=10.09;ReadPosRankSum=1.235;VQSLOD=2.8168;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:31:3.44:0,3,21	1/1:4,0:10:8.79:84,9,0	0/0:8,0:6:0.47:0,0,1	./.	1/1:6,11:17:12.04:190,12,0	1/1:6,0:20:21.02:196,21,0	1/1:14,0:27:12.02:120,12,0	0/1:8,0:10:27.23:54,0,27	0/0:18,0:21:32.76:0,33,617	1/1:10,0:18:21.01:200,21,0	1/1:4,0:10:6.01:56,6,0	0/0:29,0:29:54.18:0,54,1197	0/1:8,2:10:35.58:36,0,184	1/1:11,1:28:30.04:301,30,0	1/1:7,0:11:3:28,3,0	1/1:4,0:10:18.02:168,18,0	1/1:16,1:38:18.03:187,18,0	1/1:10,20:32:39.12:579,39,0	1/1:9,7:16:18.06:286,18,0	1/1:2,9:11:6.02:79,6,0	1/1:18,16:33:8.90:142,9,0	0/0:8,0:9:12.04:0,12,245	0/0:18,0:18:21.07:0,21,378	0/0:29,0:32:53.92:0,54,1174	1/1:4,8:12:8.94:143,9,0	1/1:7,15:22:22.32:442,22,0	1/1:5,9:14:14.79:238,15,0	1/1:0,6:6:6.02:95,6,0
chr10	76516495	.	TACAA	T	8656.53	PASS	AB=0.952;AC=39;AF=0.696;AN=56;BaseQRankSum=10.816;DP=563;FS=15.205;HRun=0;HaplotypeScore=96.0324;InbreedingCoeff=0.9119;MQ=69.63;MQ0=1;MQRankSum=-0.716;QD=23.72;ReadPosRankSum=-1.271;VQSLOD=3.0576;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:69.17:0,69,1468	1/1:2,4:6:12.04:195,12,0	0/0:22,0:19:17.44:0,17,332	0/0:27,0:21:23.87:0,24,451	1/1:9,15:24:38.91:544,39,0	1/1:10,20:30:39.06:577,39,0	1/1:5,9:14:24.08:390,24,0	1/1:16,6:22:18.02:214,18,0	0/0:18,0:18:39.13:0,39,801	1/1:12,5:17:18.06:278,18,0	1/1:2,7:9:8.94:115,9,0	0/0:20,0:20:36.12:0,36,869	0/0:20,0:20:45.13:0,45,981	1/1:8,13:21:36.12:546,36,0	1/1:3,16:19:39.13:620,39,0	1/1:1,8:9:21.07:327,21,0	1/1:9,19:28:51.17:829,51,0	1/1:10,14:23:36.08:557,36,0	1/1:8,11:19:33.11:511,33,0	1/1:5,16:21:39.06:589,39,0	1/1:10,16:26:36.12:586,36,0	0/1:19,1:20:3.66:4,0,952	0/0:16,0:16:36.12:0,36,844	0/0:37,0:37:84.18:0,84,1777	1/1:5,15:20:39.13:635,39,0	1/1:5,16:21:48.11:701,48,0	1/1:5,7:12:18.06:293,18,0	1/1:0,3:3:9.03:146,9,0
chr10	76516561	.	T	TA	576.87	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.040;DP=528;FS=2.624;HRun=10;HaplotypeScore=72.7553;InbreedingCoeff=0.8594;MQ=68.11;MQ0=0;MQRankSum=-0.484;QD=23.07;ReadPosRankSum=1.364;VQSLOD=4.5974;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:63.16:672,63,0	0/0:11,0:11:26.94:0,27,222	0/0:10,0:11:12.01:0,12,100	0/0:16,0:15:9.59:0,10,182	0/0:18,0:17:35.92:0,36,295	0/0:22,0:22:44.92:0,45,367	0/0:23,0:23:45.99:0,46,433	0/0:36,0:36:77.82:0,78,627	0/0:11,0:11:29.93:0,30,243	0/0:17,0:17:29.42:0,29,230	0/0:11,0:11:23.95:0,24,194	0/0:20,0:20:47.90:0,48,391	0/0:16,0:16:44.93:0,45,369	0/0:13,0:14:32.94:0,33,268	0/0:18,0:18:38.90:0,39,317	0/0:8,0:9:23.01:0,23,178	0/0:27,0:27:65.77:0,66,525	0/0:20,0:20:44.85:0,45,362	0/0:20,0:20:44.83:0,45,356	0/0:21,0:21:50.81:0,51,406	0/0:22,0:22:59.71:0,60,463	0/0:18,0:17:7.95:0,8,215	0/0:14,0:14:33.83:0,34,273	0/0:24,0:24:59.61:0,60,487	0/0:24,0:24:59.34:0,59,468	0/0:27,0:28:61.91:0,62,497	0/0:19,0:18:53.88:0,54,433	0/0:12,0:12:32.95:0,33,271
chr10	76516667	.	GAAA	G	7522.93	PASS	AB=0.583;AC=37;AF=0.661;AN=56;BaseQRankSum=-4.059;DP=522;FS=36.214;HRun=13;HaplotypeScore=79.9387;InbreedingCoeff=0.8743;MQ=55.29;MQ0=19;MQRankSum=-0.079;QD=20.44;ReadPosRankSum=2.121;VQSLOD=1.1727;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:52:99:0,114,989	1/1:1,5:6:9.01:110,9,0	0/0:7,0:3:8.76:0,9,107	0/0:8,0:7:5.14:0,5,180	1/1:6,13:17:29.95:345,30,0	1/1:5,11:14:16.35:216,16,0	1/1:2,20:21:42.09:511,42,0	1/1:3,26:30:53.83:798,54,0	0/0:13,0:12:26.55:0,27,404	1/1:3,15:18:39.91:455,40,0	1/1:3,14:16:27.47:352,27,0	0/0:11,0:10:23.87:0,24,373	0/0:6,0:7:21.05:0,21,369	1/1:2,13:14:30.08:364,30,0	1/1:4,11:15:19.40:252,19,0	1/1:5,6:10:11.99:146,12,0	1/1:9,33:41:75.16:911,75,0	0/1:8,20:27:1.55:545,0,2	1/1:11,15:26:47.82:497,48,0	1/1:4,6:12:13.28:161,13,0	1/1:3,11:13:18:219,18,0	0/0:15,0:13:30.06:0,30,489	0/0:11,0:10:23.99:0,24,333	0/0:24,0:25:51.08:0,51,804	1/1:3,12:17:25.28:306,25,0	1/1:5,24:29:22.47:716,22,0	1/1:5,20:24:48.10:583,48,0	1/1:0,3:3:3.01:36,3,0
chr10	76516861	.	A	ATT	1524.26	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.846;DP=629;FS=4.064;HRun=8;HaplotypeScore=76.4541;InbreedingCoeff=0.9680;MQ=78.31;MQ0=0;MQRankSum=-0.550;QD=34.64;ReadPosRankSum=2.287;VQSLOD=3.8631;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,39:44:99:1619,102,0	0/0:4,0:4:12.03:0,12,134	0/0:12,0:11:27.06:0,27,292	0/0:26,0:26:34.23:0,34,459	0/0:33,0:33:78.17:0,78,856	0/0:25,0:25:69.18:0,69,769	0/0:17,0:17:44.98:0,45,474	0/0:30,0:30:87.23:0,87,970	0/0:23,0:23:63.17:0,63,702	0/0:20,0:20:39.07:0,39,435	0/0:14,0:14:39.11:0,39,435	0/0:13,0:13:36.09:0,36,401	0/0:12,0:12:33.09:0,33,368	0/0:16,0:16:48.11:0,48,526	0/0:20,0:19:54.14:0,54,602	0/0:12,0:12:30.08:0,30,334	0/0:19,0:19:48.09:0,48,525	0/0:25,0:25:72.19:0,72,802	0/0:23,0:23:39.06:0,39,435	0/0:21,0:21:60.13:0,60,650	0/0:28,0:28:75.18:0,75,835	0/0:23,0:23:57.12:0,57,626	0/0:18,0:18:42.06:0,42,454	0/0:20,0:20:57.11:0,57,621	0/0:25,0:25:66.08:0,66,708	0/0:34,0:34:87.21:0,87,969	0/0:28,0:28:72.18:0,72,794	0/0:44,0:44:99:0,132,1471
chr10	76517889	.	ATAGAAAGGACT	A	1909.01	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.175;DP=822;FS=3.006;HRun=0;HaplotypeScore=279.5593;InbreedingCoeff=0.9977;MQ=81.26;MQ0=0;MQRankSum=-7.460;QD=40.62;ReadPosRankSum=0.865;VQSLOD=2.7590;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,41:47:60.21:2004,60,0	0/0:8,0:8:24.08:0,24,1370	0/0:20,0:20:53.67:0,54,2513	0/0:26,0:26:62.43:0,62,2599	0/0:18,0:18:54.19:0,54,2743	0/0:18,0:18:54.19:0,54,3006	0/0:24,0:24:69.24:0,69,3780	0/0:29,0:29:81.27:0,81,4095	0/0:39,0:39:99:0,111,5599	0/0:42,0:42:99:0,123,6683	0/0:14,0:14:39.13:0,39,2164	0/0:56,0:56:99:0,169,8643	0/0:26,0:26:78.27:0,78,4184	0/0:36,0:36:99:0,105,5673	0/0:42,0:42:99:0,123,6485	0/0:25,0:25:72.23:0,72,3889	0/0:35,0:34:99:0,102,5668	0/0:28,0:28:81.24:0,81,3952	0/0:24,0:24:72.22:0,72,3474	0/0:13,0:13:36.12:0,36,2002	0/0:87,0:87:99:0,253,13579	0/0:27,0:27:78.27:0,78,4298	0/0:18,0:18:48.15:0,48,2341	0/0:31,0:31:87.30:0,87,4867	0/0:24,0:24:69.23:0,69,3576	0/0:23,0:23:66.22:0,66,3525	0/0:29,0:29:81.28:0,81,4513	0/0:13,0:13:39.13:0,39,2057
chr10	76520261	.	AACCACATGGTGGCTC	A	16982.38	PASS	AB=0.531;AC=19;AF=0.339;AN=56;BaseQRankSum=15.938;DP=636;FS=21.731;HRun=0;HaplotypeScore=254.9756;InbreedingCoeff=0.9169;MQ=51.95;MQ0=35;MQRankSum=-14.862;QD=97.60;ReadPosRankSum=1.527;VQSLOD=3.1332;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,9844	1/1:0,9:9:27.09:1215,27,0	0/0:30,0:9:21.07:0,21,1172	0/0:29,0:7:15.05:0,15,574	0/0:21,0:21:60.21:0,60,4328	1/1:4,13:17:42.14:1844,42,0	1/1:5,13:18:36.12:1619,36,0	1/1:14,11:24:33.08:1180,33,0	0/0:32,0:32:96.33:0,96,6875	1/1:7,17:24:54.18:2430,54,0	1/1:3,8:11:30.06:1165,30,0	0/0:29,0:29:87.30:0,87,5872	0/0:34,0:34:99:0,99,7075	1/1:3,17:20:51.18:2293,51,0	1/1:5,14:19:48.16:2045,48,0	0/1:2,15:17:99:1976,0,177	1/1:3,11:14:27.09:1215,27,0	0/0:27,0:27:78.25:0,78,5528	0/0:17,0:17:51.16:0,51,2582	0/0:24,0:24:72.25:0,72,5174	0/0:23,0:23:63.22:0,63,4332	0/0:26,0:26:78.25:0,78,4979	0/0:14,0:14:42.13:0,42,2648	0/0:26,0:26:75.26:0,75,5011	0/0:21,0:21:63.22:0,63,4484	0/0:21,0:21:60.21:0,60,4263	0/0:29,0:29:84.29:0,84,5564	0/0:13,0:12:39.13:0,39,2609
chr10	76520339	.	AAAAT	A	9547.80	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=10.052;DP=720;FS=4.905;HRun=0;HaplotypeScore=150.5056;InbreedingCoeff=0.9987;MQ=59.67;MQ0=5;MQRankSum=-6.560;QD=38.19;ReadPosRankSum=3.172;VQSLOD=5.1508;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,114,2880	1/1:3,16:19:39.13:701,39,0	0/0:24,0:15:30.99:0,31,734	0/0:20,0:17:39.60:0,40,892	0/0:22,0:22:54.19:0,54,1376	1/1:1,19:20:54.14:936,54,0	1/1:3,18:21:45.11:775,45,0	1/1:6,25:29:63.14:997,63,0	0/0:37,0:37:99:0,99,2559	1/1:3,26:28:75.24:1291,75,0	1/1:5,26:31:60.21:1078,60,0	0/0:32,0:32:87.28:0,87,2180	0/0:29,0:29:78.27:0,78,1998	1/1:2,18:20:45.08:720,45,0	1/1:7,30:37:78.27:1402,78,0	1/1:6,12:18:36.09:591,36,0	1/1:3,21:24:60.20:1058,60,0	0/0:28,0:29:69.24:0,69,1720	0/0:17,0:13:39.13:0,39,1013	0/0:35,0:35:99:0,99,2508	0/0:23,0:23:60.21:0,60,1528	0/0:17,0:17:48.08:0,48,1174	0/0:27,0:27:72.22:0,72,1735	0/0:16,0:16:45.15:0,45,1160	0/0:21,0:21:57.20:0,57,1468	0/0:26,0:26:72.25:0,72,1843	0/0:42,0:42:99:0,114,2903	0/0:7,0:6:18.03:0,18,412
chr10	76520358	.	T	TA	1089.40	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.693;DP=717;FS=1.377;HRun=8;HaplotypeScore=125.8534;InbreedingCoeff=0.9982;MQ=66.06;MQ0=2;MQRankSum=0.734;QD=25.33;ReadPosRankSum=2.199;VQSLOD=2.4853;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,40:43:80.85:1184,81,0	0/0:16,0:16:39.02:0,39,356	0/0:21,0:16:41.67:0,42,336	0/0:16,0:14:26.96:0,27,234	0/0:24,0:24:68.98:0,69,614	0/0:23,0:23:51.01:0,51,462	0/0:21,0:21:50.93:0,51,450	0/0:36,0:34:78.02:0,78,709	0/0:36,0:36:99:0,99,904	0/0:34,0:32:83.94:0,84,751	0/0:28,0:28:72.04:0,72,658	0/0:28,0:28:65.97:0,66,593	0/0:26,0:26:72.02:0,72,654	0/0:20,0:20:56.97:0,57,507	0/0:37,0:37:96.04:0,96,877	0/0:18,0:18:51.01:0,51,461	0/0:29,0:28:68.98:0,69,622	0/0:22,0:22:54.02:0,54,494	0/0:22,0:21:54.02:0,54,493	0/0:34,0:34:87.01:0,87,788	0/0:21,0:21:53.96:0,54,481	0/0:18,0:18:47.98:0,48,428	0/0:22,0:22:62.99:0,63,562	0/0:14,0:14:36.02:0,36,329	0/0:26,0:26:72.04:0,72,659	0/0:30,0:30:81.03:0,81,739	0/0:41,0:40:99:0,111,1015	0/0:11,0:10:29.99:0,30,268
chr10	76522315	.	GAGTTGTCTA	G	1217.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.226;DP=578;FS=0.000;HRun=0;HaplotypeScore=154.6741;InbreedingCoeff=0.9920;MQ=90.37;MQ0=0;MQRankSum=-6.559;QD=50.75;ReadPosRankSum=-0.562;VQSLOD=3.2106;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:45.15:1313,45,0	0/0:11,0:11:30.10:0,30,1446	0/0:23,0:23:66.21:0,66,2746	0/0:24,0:23:63.22:0,63,2545	0/0:12,0:12:33.09:0,33,1270	0/0:16,0:16:48.15:0,48,2179	0/0:29,0:29:81.28:0,81,3581	0/0:15,0:15:39.13:0,39,1756	0/0:25,0:25:72.23:0,72,3128	0/0:21,0:21:60.21:0,60,2813	0/0:8,0:8:24.08:0,24,1106	0/0:35,0:35:99:0,105,4830	0/0:19,0:19:54.19:0,54,2570	0/0:23,0:23:66.23:0,66,3181	0/0:28,0:28:81.26:0,81,3804	0/0:26,0:26:75.26:0,75,3500	0/0:29,0:29:75.26:0,75,3537	0/0:28,0:28:84.27:0,84,3827	0/0:16,0:16:39.13:0,39,1595	0/0:7,0:7:21.07:0,21,947	0/0:44,0:44:99:0,129,5848	0/0:11,0:11:33.11:0,33,1590	0/0:14,0:14:39.13:0,39,1748	0/0:31,0:31:90.31:0,90,4105	0/0:13,0:13:36.12:0,36,1687	0/0:10,0:10:30.10:0,30,1448	0/0:24,0:24:66.23:0,66,3111	0/0:12,0:12:36.12:0,36,1749
chr10	76524550	.	GA	G	1446.86	PASS	AB=0.742;AC=35;AF=0.625;AN=56;BaseQRankSum=4.549;DP=537;FS=1.830;HRun=16;HaplotypeScore=70.0548;InbreedingCoeff=0.3099;MQ=57.18;MQ0=13;MQRankSum=-0.167;QD=3.34;ReadPosRankSum=0.850;VQSLOD=0.0608;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,19:40:6.94:107,0,7	0/1:3,6:8:11.88:44,0,12	0/1:7,2:6:6.28:29,0,6	0/1:9,1:7:9.87:10,0,39	1/1:8,1:21:15.22:44,15,0	0/1:10,9:20:22.20:88,0,22	0/1:9,7:17:30.97:43,0,31	1/1:25,14:39:35.11:191,35,0	0/0:11,0:17:15.90:0,16,92	0/1:14,6:20:6.13:72,0,6	1/1:9,7:16:15.37:93,15,0	0/0:17,0:16:20.87:0,21,156	0/0:19,0:19:18.50:0,19,148	0/1:13,5:19:17.43:116,0,17	1/1:5,11:18:27.57:155,28,0	0/1:12,3:15:17.14:29,0,17	1/1:7,13:23:5.85:101,6,0	1/1:8,2:23:31.34:119,31,0	1/1:7,1:19:19.14:64,19,0	1/1:10,0:17:9.12:26,9,0	1/1:3,0:7:4.96:24,5,0	0/0:12,0:12:14.93:0,15,115	0/0:13,0:12:19:0,19,159	0/0:22,0:26:47.92:0,48,396	1/1:6,2:23:28.67:111,29,0	1/1:9,1:19:15.45:54,15,0	1/1:12,0:20:10.88:44,11,0	1/1:8,0:16:23.17:73,23,0
chr10	76526781	.	T	TGG	6121.37	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-0.680;DP=442;FS=12.372;HRun=3;HaplotypeScore=56.0855;InbreedingCoeff=0.9909;MQ=50.27;MQ0=12;MQRankSum=-2.047;QD=43.11;ReadPosRankSum=0.214;VQSLOD=3.2280;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:75.25:0,75,1050	1/1:0,7:7:21.07:385,21,0	0/0:20,0:11:24.08:0,24,336	0/0:15,0:12:27.09:0,27,372	0/0:14,0:13:30.10:0,30,420	1/1:1,12:12:36.08:595,36,0	1/1:3,14:16:36.12:660,36,0	1/1:6,14:18:45.11:753,45,0	0/0:18,0:18:45.15:0,45,624	1/1:1,10:11:30.10:520,30,0	1/1:0,6:7:21.07:372,21,0	0/0:18,0:18:39.13:0,39,546	0/0:10,0:10:21.07:0,21,293	1/1:2,8:10:24.08:433,24,0	1/1:1,12:12:27.09:495,27,0	1/1:1,13:11:30.10:549,30,0	1/1:2,27:27:75.26:1359,75,0	0/0:17,0:15:42.14:0,42,584	0/0:15,0:14:33.09:0,33,442	0/0:10,0:10:24.07:0,24,336	0/0:23,0:22:63.21:0,63,882	0/0:4,0:4:12.04:0,12,163	0/0:8,0:8:18.06:0,18,252	0/0:24,0:23:66.22:0,66,923	0/0:12,0:12:36.12:0,36,504	0/0:20,0:20:57.19:0,57,798	0/0:23,0:23:69.23:0,69,965	0/0:15,0:15:36.12:0,36,504
chr10	76526938	.	A	AT	1303.44	PASS	AB=0.797;AC=20;AF=0.476;AN=42;BaseQRankSum=-4.503;DP=228;FS=6.224;HRun=1;HaplotypeScore=37.8794;InbreedingCoeff=0.6828;MQ=53.61;MQ0=6;MQRankSum=2.073;QD=10.26;ReadPosRankSum=4.184;VQSLOD=1.4969;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:18:15.79:167,16,0	./.	0/0:37,0:9:23.70:0,24,176	0/0:27,0:7:4.27:0,4,50	1/1:12,0:12:21.03:156,21,0	./.	./.	./.	0/0:7,0:6:14.72:0,15,103	./.	0/1:1,0:1:0:0,0,0	0/0:8,0:8:18.86:0,19,128	0/0:5,0:5:9.57:0,10,67	./.	0/0:2,0:1:2.88:0,3,15	0/0:1,0:1:1.55:0,2,4	./.	0/1:6,13:18:9.04:35,0,9	1/1:5,7:10:26.48:202,26,0	1/1:6,0:6:17.60:127,18,0	1/1:6,0:6:8.72:71,9,0	0/0:1,0:1:2.92:0,3,17	0/0:2,0:2:2.97:0,3,20	0/0:10,0:8:19.05:0,19,118	1/1:6,0:6:8.11:66,8,0	1/1:7,0:7:14.87:124,15,0	1/1:16,0:16:35.85:237,36,0	1/1:23,0:23:39.98:279,40,0
chr10	76527151	.	TAA	T	4910.94	PASS	AB=0.605;AC=39;AF=0.696;AN=56;BaseQRankSum=1.534;DP=471;FS=6.002;HRun=15;HaplotypeScore=61.1559;InbreedingCoeff=0.8221;MQ=50.63;MQ0=39;MQRankSum=2.208;QD=12.86;ReadPosRankSum=4.992;VQSLOD=3.7142;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,15:21:7.40:268,7,0	1/1:2,9:10:26.94:238,27,0	0/0:9,0:4:4.36:0,4,38	0/0:3,0:3:5.92:0,6,42	1/1:10,9:17:1.92:160,2,0	1/1:3,14:16:29.98:264,30,0	1/1:6,10:15:20.96:229,21,0	1/1:8,10:15:26.84:237,27,0	0/0:21,0:18:41.57:0,42,502	1/1:8,16:24:32.57:326,33,0	1/1:5,14:18:32.50:272,33,0	0/0:15,0:13:30.10:0,30,402	0/0:12,0:11:24.08:0,24,323	1/1:8,12:17:23.83:211,24,0	1/1:2,9:11:14.99:131,15,0	1/1:4,8:10:26.71:223,27,0	1/1:7,18:23:30.15:423,30,0	0/1:8,15:15:1.62:278,0,2	1/1:15,11:21:27.60:219,28,0	1/1:6,10:16:23.91:208,24,0	1/1:3,15:18:26.84:282,27,0	0/0:3,0:2:3.01:0,3,37	0/0:9,0:11:20.09:0,20,197	0/0:14,0:12:33.06:0,33,427	1/1:6,9:14:20.95:184,21,0	1/1:8,14:22:29.68:302,30,0	1/1:7,16:19:21.77:323,22,0	1/1:11,5:13:14.89:132,15,0
chr10	76530970	.	CCGGAGAA	C	15832.48	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=11.621;DP=500;FS=4.151;HRun=0;HaplotypeScore=135.8577;InbreedingCoeff=0.9633;MQ=79.12;MQ0=0;MQRankSum=-14.049;QD=46.29;ReadPosRankSum=3.020;VQSLOD=4.5127;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,29:39:72.25:1725,72,0	1/1:1,10:11:24.08:543,24,0	0/0:21,0:21:43.49:0,43,1420	0/0:21,0:21:48.07:0,48,1542	1/1:4,16:20:42.14:976,42,0	1/1:3,9:12:30.10:732,30,0	1/1:3,18:21:51.18:1215,51,0	1/1:11,10:21:30.05:518,30,0	0/0:25,0:25:63.22:0,63,2421	1/1:2,20:21:57.11:1147,57,0	1/1:1,8:9:18.06:423,18,0	0/0:24,0:24:69.22:0,69,2490	0/0:17,0:17:48.16:0,48,1821	1/1:3,14:17:33.11:803,33,0	1/1:2,15:17:39.13:941,39,0	1/1:1,13:14:36.12:882,36,0	1/1:10,17:27:39.13:956,39,0	1/1:7,12:19:30.10:735,30,0	1/1:7,10:17:30.04:607,30,0	1/1:6,6:12:21.07:515,21,0	1/1:7,9:15:12.04:292,12,0	0/0:13,0:13:33.11:0,33,1202	0/0:12,0:12:33.11:0,33,1242	0/0:25,0:25:66.20:0,66,2400	1/1:4,13:17:42.14:1011,42,0	1/1:1,13:14:39.13:930,39,0	1/1:4,10:15:33.11:809,33,0	1/1:1,1:2:3.01:74,3,0
chr10	76530980	.	GAGAAC	G	6375.06	PASS	AB=0.992;AC=24;AF=0.429;AN=56;BaseQRankSum=16.341;DP=463;FS=1.562;HRun=0;HaplotypeScore=137.9542;InbreedingCoeff=-0.1143;MQ=80.60;MQ0=0;MQRankSum=-14.588;QD=20.77;ReadPosRankSum=7.224;VQSLOD=4.2980;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:36:70.40:703,0,70	1/1:10,0:10:23.89:225,24,0	0/0:22,0:22:62.47:0,62,1609	0/0:21,0:21:56.85:0,57,1533	0/1:18,1:19:99:361,0,142	0/1:10,1:11:6.53:301,0,7	0/1:22,0:22:96.50:473,0,96	0/1:14,0:13:99:187,0,149	0/0:23,0:23:69.24:0,69,2252	1/1:21,0:20:3.92:468,4,0	0/1:10,0:10:14.22:163,0,14	0/0:24,0:24:72.23:0,72,2226	0/0:17,0:17:51.18:0,51,1659	0/1:15,0:15:3.82:327,0,4	0/1:18,0:18:71.97:374,0,72	0/1:14,0:14:0.91:364,0,1	0/1:22,0:22:99:376,0,202	0/1:18,0:18:99:289,0,152	0/1:12,0:12:61.92:245,0,62	0/1:9,0:9:52.91:208,0,53	0/1:10,0:10:24.98:117,0,25	0/0:15,0:15:39.13:0,39,1188	0/0:11,0:11:33.11:0,33,1065	0/0:23,0:23:69.22:0,69,2164	1/1:13,2:14:42.03:453,42,0	0/1:18,0:18:99:373,0,146	0/1:12,0:12:3.90:334,0,4	1/1:1,0:1:3.01:34,3,0
chr10	76531223	.	CTT	C	3942.93	PASS	AB=0.599;AC=24;AF=0.429;AN=56;BaseQRankSum=-4.575;DP=525;FS=6.980;HRun=13;HaplotypeScore=80.9309;InbreedingCoeff=0.6354;MQ=66.22;MQ0=6;MQRankSum=-2.051;QD=13.37;ReadPosRankSum=3.408;VQSLOD=2.5482;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:36:77.80:739,78,0	0/0:3,0:3:6.02:0,6,82	0/0:9,0:8:5.95:0,6,43	0/0:8,0:10:13.59:0,14,154	1/1:2,7:11:8.86:137,9,0	0/0:18,0:17:42.04:0,42,528	0/0:13,0:15:29.58:0,30,383	0/1:12,3:35:38.26:38,0,90	0/0:18,0:18:45.13:0,45,601	0/1:2,2:18:17.50:18,0,79	0/0:3,0:11:14.85:0,15,52	0/0:19,1:19:18.23:0,18,525	0/0:16,0:17:35.70:0,36,461	0/1:4,1:12:30.63:37,0,31	0/1:13,2:25:18.51:19,0,140	0/0:6,0:20:27.45:0,27,94	0/0:9,2:40:53.24:0,53,329	1/1:4,20:28:56.03:568,56,0	1/1:5,13:15:33:320,33,0	1/1:3,9:12:23.70:216,24,0	1/1:3,16:20:38.36:361,38,0	0/0:12,1:13:0.98:0,1,343	0/0:6,0:7:19.92:0,20,234	0/0:25,0:26:56.59:0,57,713	1/1:3,12:19:32.45:327,32,0	1/1:3,16:20:38.90:427,39,0	1/1:4,11:17:29.38:306,29,0	1/1:2,15:19:48.03:432,48,0
chr10	76531373	.	CGGAA	C	4098.44	PASS	AB=0.958;AC=20;AF=0.385;AN=52;BaseQRankSum=4.914;DP=703;FS=15.745;HRun=0;HaplotypeScore=124.7002;InbreedingCoeff=0.8050;MQ=69.80;MQ0=3;MQRankSum=1.310;QD=14.28;ReadPosRankSum=1.661;VQSLOD=2.1546;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:75.24:0,75,1673	0/0:5,0:7:3.01:0,3,52	./.	./.	1/1:12,10:23:19.61:271,20,0	0/0:7,0:19:33.11:0,33,576	0/0:18,0:26:27.09:0,27,444	0/0:32,0:32:10.28:0,10,164	0/0:28,1:29:16.51:0,17,1328	0/0:34,0:34:57.14:0,57,1219	0/0:12,0:12:24.04:0,24,514	0/1:23,1:23:7.59:8,0,808	0/0:18,0:18:24.08:0,24,549	0/0:7,0:21:45.14:0,45,755	0/0:9,0:23:39.13:0,39,675	0/0:22,0:22:39.12:0,39,874	0/0:24,0:36:51.17:0,51,855	1/1:10,10:20:30.10:467,30,0	1/1:17,4:21:11.95:157,12,0	1/1:6,14:20:33.11:506,33,0	1/1:14,24:38:57.19:888,57,0	0/0:22,0:21:27.09:0,27,621	0/0:25,0:25:36.10:0,36,757	0/1:41,2:43:17.91:18,0,1388	1/1:12,13:25:36.12:549,36,0	1/1:18,17:35:48.12:720,48,0	1/1:13,12:25:18.06:280,18,0	1/1:8,5:13:15.05:234,15,0
chr10	76531859	.	C	CA	2045.78	PASS	AB=0.840;AC=26;AF=0.464;AN=56;BaseQRankSum=-3.353;DP=443;FS=0.987;HRun=13;HaplotypeScore=52.6946;InbreedingCoeff=0.2292;MQ=73.65;MQ0=1;MQRankSum=-0.285;QD=7.47;ReadPosRankSum=0.062;VQSLOD=2.0674;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,17:22:33.04:306,33,0	1/1:0,3:3:3:28,3,0	0/0:26,0:18:3.23:0,3,72	0/0:18,1:10:7.93:0,8,47	0/1:20,3:24:36.97:37,0,202	1/1:12,12:26:34.81:413,35,0	0/1:4,13:18:14.87:190,0,15	1/1:8,13:22:18.07:276,18,0	0/1:6,1:7:30.88:31,0,47	1/1:7,6:13:0.38:137,0,0	1/1:2,10:13:3.19:144,3,0	0/0:8,0:9:22.78:0,23,147	0/0:10,0:10:8.88:0,9,62	0/1:5,0:5:0:0,0,0	0/1:4,7:11:5.37:96,0,5	1/1:3,4:7:9.01:84,9,0	1/1:4,19:25:44.73:391,45,0	0/0:25,1:26:31.50:0,32,357	0/1:22,2:25:6.23:6,0,238	0/1:13,2:15:25.93:26,0,135	0/1:8,2:10:28.84:44,0,29	0/0:9,0:9:17.75:0,18,123	0/0:15,1:17:2.76:0,3,147	0/0:12,0:14:20.98:0,21,129	0/0:17,0:17:35.44:0,35,239	0/1:14,1:15:7.07:7,0,101	0/1:11,2:13:5.01:5,0,106	0/0:18,0:18:44.52:0,45,308
chr10	76533265	.	A	AT	9780.26	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-15.495;DP=709;FS=1.286;HRun=5;HaplotypeScore=64.7807;InbreedingCoeff=1.0000;MQ=85.16;MQ0=0;MQRankSum=-2.352;QD=34.08;ReadPosRankSum=0.301;VQSLOD=5.1889;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,43:47:99:1566,120,0	1/1:1,14:15:42.14:553,42,0	0/0:25,0:25:51.11:0,51,530	0/0:20,0:21:47.14:0,47,484	0/0:24,0:24:60.15:0,60,642	1/1:0,24:24:60.20:789,60,0	1/1:4,32:36:87.28:1144,87,0	1/1:1,26:27:78.24:1013,78,0	0/0:19,0:19:51.12:0,51,548	1/1:2,29:31:84.27:1105,84,0	1/1:1,22:23:66.17:849,66,0	0/0:31,0:31:90.20:0,90,951	0/0:28,0:28:84.18:0,84,891	1/1:1,19:20:51.17:671,51,0	1/1:2,18:20:48.16:632,48,0	1/1:0,18:18:45.15:591,45,0	1/1:3,23:26:66.21:868,66,0	0/0:27,0:27:69.17:0,69,742	0/0:19,0:19:51.11:0,51,540	0/0:19,0:19:57.14:0,57,613	0/0:41,0:41:99:0,117,1258	0/0:24,0:24:51.10:0,51,540	0/0:18,0:18:51.13:0,51,548	0/0:36,0:36:99:0,99,1055	0/0:22,0:22:57.13:0,57,605	0/0:27,0:27:81.20:0,81,870	0/0:27,0:27:81.20:0,81,870	0/0:14,0:14:36.09:0,36,387
chr10	76533502	.	TCC	T	16561.23	PASS	AB=0.528;AC=37;AF=0.661;AN=56;BaseQRankSum=15.545;DP=673;FS=1.696;HRun=4;HaplotypeScore=102.0756;InbreedingCoeff=0.9385;MQ=88.74;MQ0=0;MQRankSum=-6.525;QD=37.64;ReadPosRankSum=2.818;VQSLOD=4.1914;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,2653	1/1:1,11:12:30.10:442,30,0	0/0:25,0:25:75.26:0,75,1367	0/0:27,0:27:81.05:0,81,1398	1/1:2,21:23:45.11:637,45,0	1/1:0,35:35:93.31:1370,93,0	1/1:0,29:29:72.20:1036,72,0	1/1:0,25:25:75.24:1087,75,0	0/0:13,0:13:39.13:0,39,731	1/1:0,22:22:63.21:927,63,0	1/1:0,17:17:45.11:638,45,0	0/0:26,0:26:72.25:0,72,1338	0/0:31,0:31:90.31:0,90,1685	1/1:2,23:25:66.22:972,66,0	1/1:0,29:29:75.25:1105,75,0	0/1:2,17:19:5.04:656,0,5	1/1:1,37:38:96.32:1414,96,0	1/1:0,20:20:48.16:707,48,0	1/1:2,14:16:42.11:579,42,0	1/1:0,15:15:42.14:612,42,0	1/1:1,39:40:90.26:1294,90,0	0/0:24,0:24:72.25:0,72,1349	0/0:14,0:14:42.14:0,42,771	0/0:25,0:25:75.26:0,75,1387	1/1:0,11:11:30.10:442,30,0	1/1:3,28:31:84.28:1234,84,0	1/1:0,25:25:75.17:1056,75,0	1/1:0,8:8:24.08:353,24,0
chr10	76533724	.	GC	G	3878.29	PASS	AB=0.908;AC=25;AF=0.446;AN=56;BaseQRankSum=7.375;DP=549;FS=2.107;HRun=10;HaplotypeScore=66.1680;InbreedingCoeff=0.6396;MQ=72.41;MQ0=0;MQRankSum=-0.403;QD=15.09;ReadPosRankSum=2.877;VQSLOD=4.1998;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:36:66.35:0,66,431	1/1:1,8:9:23.99:208,24,0	0/1:9,1:11:4.99:5,0,79	0/1:11,1:12:3.17:3,0,97	0/0:16,0:16:1.29:0,1,232	1/1:2,22:24:55.24:492,55,0	1/1:2,19:21:48.67:439,49,0	1/1:3,12:15:29.97:260,30,0	0/0:20,1:21:19.07:0,19,439	1/1:3,13:16:35.96:309,36,0	1/1:3,10:13:26.98:234,27,0	0/0:21,1:22:34.09:0,34,596	0/0:20,0:20:45.12:0,45,498	1/1:2,19:21:53.99:469,54,0	1/1:4,29:33:80.97:703,81,0	1/1:3,17:20:47.98:417,48,0	1/1:2,14:16:8.81:305,9,0	0/0:15,0:15:42.57:0,43,455	0/0:17,0:17:33.07:0,33,356	0/1:19,2:21:10:10,0,348	0/0:35,4:39:27.06:0,27,727	0/0:10,0:12:23.90:0,24,245	0/0:19,2:21:2.02:0,2,470	0/0:22,0:22:60.15:0,60,657	0/0:22,3:25:11.02:0,11,555	0/1:14,2:16:21.98:22,0,227	0/0:26,0:26:54.11:0,54,576	0/1:8,1:9:1.99:2,0,208
chr10	76533944	.	CA	C	5868.56	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=2.988;DP=658;FS=11.060;HRun=7;HaplotypeScore=100.9114;InbreedingCoeff=0.9782;MQ=71.72;MQ0=0;MQRankSum=0.964;QD=26.43;ReadPosRankSum=-1.171;VQSLOD=3.7602;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:81.15:0,81,923	1/1:1,8:9:24.05:245,24,0	0/0:7,0:7:12.04:0,12,150	0/0:13,0:13:5.59:0,6,194	0/0:24,0:24:66.21:0,66,821	1/1:1,26:27:72.16:735,72,0	1/1:5,25:30:60.13:612,60,0	1/1:3,29:32:87.19:887,87,0	0/0:17,0:17:48.15:0,48,593	1/1:0,18:18:54.11:545,54,0	1/1:1,15:16:45.10:459,45,0	0/0:27,0:27:81.23:0,81,981	0/0:33,0:33:81.25:0,81,1006	1/1:1,25:26:66.15:673,66,0	1/1:1,26:27:75.17:765,75,0	1/1:3,24:27:66.15:672,66,0	1/1:1,9:10:27.06:275,27,0	0/0:27,0:27:78.25:0,78,979	0/0:26,0:26:75.23:0,75,931	0/0:34,0:34:96.30:0,96,1197	0/0:24,0:24:69.21:0,69,854	0/0:13,0:13:36.12:0,36,453	0/0:35,0:35:87.25:0,87,1067	0/0:22,0:22:60.19:0,60,754	0/0:22,0:22:63.20:0,63,791	0/0:34,1:35:65.64:0,66,1116	0/0:22,0:22:63.19:0,63,778	0/0:16,0:16:39.12:0,39,490
chr10	76533958	.	AATGC	A	2095.96	PASS	AB=1.000;AC=20;AF=0.385;AN=52;BaseQRankSum=-1.995;DP=676;FS=0.386;HRun=0;HaplotypeScore=158.3896;InbreedingCoeff=-0.3005;MQ=67.70;MQ0=3;MQRankSum=0.909;QD=4.65;ReadPosRankSum=3.552;VQSLOD=1.9200;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,28:44:21.07:350,21,0	0/1:11,0:11:53.83:54,0,247	./.	./.	0/1:25,0:25:99:109,0,405	0/1:30,0:30:99:153,0,604	0/1:34,0:34:99:163,0,496	1/1:31,0:26:27.03:252,27,0	0/0:20,0:20:54.04:0,54,835	0/1:20,0:20:66.29:66,0,407	0/1:18,0:18:82.92:83,0,340	0/0:32,0:32:78.15:0,78,1412	0/0:31,0:31:75.12:0,75,1400	0/1:25,0:25:49.90:50,0,457	0/0:33,0:33:22.25:0,22,904	0/1:32,0:32:99:161,0,644	0/1:12,0:12:65.85:66,0,247	0/1:23,0:23:99:139,0,350	0/1:22,0:21:99:156,0,180	0/1:28,0:28:99:168,0,480	0/1:30,0:30:76.71:77,0,783	0/0:13,0:13:33.02:0,33,515	0/0:28,0:28:66.08:0,66,1179	0/0:21,0:21:41.99:0,42,635	0/1:23,0:23:99:112,0,379	0/0:33,0:33:35.40:0,35,795	0/1:27,0:27:85.97:86,0,546	0/1:16,0:16:17.89:18,0,383
chr10	76537138	.	T	TAAACAAAAACAA	701.77	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.546;DP=641;FS=1.457;HRun=0;HaplotypeScore=212.7321;InbreedingCoeff=0.7817;MQ=65.15;MQ0=2;MQRankSum=-4.457;QD=17.99;ReadPosRankSum=-3.361;VQSLOD=2.4161;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,13:39:15.05:790,15,0	0/0:9,0:9:21.07:0,21,599	0/0:28,0:21:5.21:0,5,165	0/0:28,0:23:14.81:0,15,246	0/0:21,0:21:51.16:0,51,1449	0/0:21,0:21:36.12:0,36,1159	0/0:25,0:25:42.09:0,42,1085	0/0:18,0:18:27.07:0,27,522	0/0:23,0:23:60.19:0,60,1675	0/0:32,0:32:60.20:0,60,1881	0/0:11,0:11:6.02:0,6,206	0/0:29,0:29:45.12:0,45,1279	0/0:14,0:14:36.09:0,36,913	0/0:24,0:24:51.10:0,51,1269	0/0:23,0:23:45.14:0,45,1391	0/0:15,0:15:30.10:0,30,932	0/0:24,0:24:48.14:0,48,1545	0/0:24,0:24:38.78:0,39,1451	0/0:20,0:20:27.05:0,27,635	0/0:28,0:28:51.17:0,51,1470	0/0:30,0:30:51.17:0,51,1551	0/0:22,0:22:48.16:0,48,1444	0/0:22,0:22:51.17:0,51,1482	0/0:31,0:31:66.23:0,66,2158	0/0:21,0:21:39.10:0,39,1026	0/0:20,0:20:36.12:0,36,1077	0/0:28,0:28:66.21:0,66,1814	0/0:11,0:11:24.08:0,24,702
chr10	76538151	.	CTT	C	2984.39	PASS	AB=0.563;AC=19;AF=0.339;AN=56;BaseQRankSum=6.856;DP=477;FS=1.847;HRun=13;HaplotypeScore=82.0309;InbreedingCoeff=0.9096;MQ=73.46;MQ0=1;MQRankSum=2.333;QD=19.01;ReadPosRankSum=4.313;VQSLOD=3.2932;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:45.07:0,45,577	1/1:0,9:10:26.78:245,27,0	0/0:17,1:13:10.72:0,11,165	0/0:12,0:11:11.44:0,11,75	0/0:30,0:31:71.19:0,71,819	1/1:4,15:20:41.72:440,42,0	1/1:0,8:8:21.03:204,21,0	1/1:12,14:26:44.91:415,45,0	0/0:12,0:14:35.59:0,36,452	1/1:4,13:18:32.91:358,33,0	1/1:4,15:20:41.71:385,42,0	0/0:12,0:12:27.07:0,27,356	0/0:8,0:9:23.55:0,24,295	0/1:2,6:9:6.18:84,0,6	1/1:0,12:13:20.78:253,21,0	1/1:1,12:13:36.06:349,36,0	1/1:1,19:20:48.05:465,48,0	0/0:24,0:24:63.46:0,63,761	0/0:15,0:15:35.84:0,36,389	0/0:17,0:18:44.57:0,45,547	0/0:3,0:3:7.27:0,7,90	0/0:21,0:21:57.14:0,57,736	0/0:20,0:20:51.11:0,51,629	0/0:12,0:12:33.10:0,33,460	0/0:18,0:19:47.58:0,48,601	0/0:23,1:24:19.04:0,19,588	0/0:29,0:31:69.43:0,69,896	0/0:15,0:15:33.03:0,33,432
chr10	76539532	.	T	TTTTTG	5307.13	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=2.217;DP=586;FS=1.930;HRun=0;HaplotypeScore=154.2593;InbreedingCoeff=0.5909;MQ=58.09;MQ0=24;MQRankSum=-0.757;QD=11.61;ReadPosRankSum=3.419;VQSLOD=4.1365;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,16:37:23.62:783,24,0	0/1:9,0:9:17.09:76,0,17	0/0:22,0:11:16.84:0,17,189	0/1:8,0:5:11.70:12,0,49	1/1:30,0:30:72.88:693,73,0	1/1:24,0:22:6.02:90,6,0	0/1:25,0:25:46.45:87,0,46	1/1:21,0:20:37.14:298,37,0	0/0:14,0:14:26.96:0,27,334	1/1:28,0:26:35.83:294,36,0	0/1:23,0:20:22.21:179,0,22	0/0:19,0:19:36.26:0,36,442	0/0:17,0:15:30.08:0,30,498	1/1:13,0:12:0.34:14,0,0	1/1:10,0:10:7.43:59,7,0	1/1:23,0:23:8.75:99,9,0	1/1:34,0:32:19.35:128,19,0	1/1:23,0:20:32.90:304,33,0	1/1:16,16:29:48.46:538,48,0	1/1:19,1:20:27.82:329,28,0	1/1:14,0:12:18:177,18,0	0/0:15,0:15:23.97:0,24,335	0/0:23,0:22:39.02:0,39,556	0/0:19,0:16:35.66:0,36,457	1/1:18,0:18:4.77:183,5,0	1/1:26,0:23:36.15:446,36,0	1/1:26,0:26:38.37:327,38,0	1/1:12,0:9:22.67:194,23,0
chr10	76539533	.	T	TTTTG	6149.50	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=3.054;DP=606;FS=0.000;HRun=0;HaplotypeScore=142.6716;InbreedingCoeff=0.6777;MQ=57.28;MQ0=26;MQRankSum=0.073;QD=12.84;ReadPosRankSum=4.555;VQSLOD=4.0956;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,2:35:15.25:546,15,0	0/1:9,0:9:11.82:104,0,12	0/0:22,0:11:16.93:0,17,176	0/1:8,0:5:12.13:12,0,46	1/1:32,4:36:74.16:818,74,0	1/1:24,0:22:26.57:178,27,0	0/1:25,0:25:33.35:131,0,33	1/1:25,0:24:25.37:355,25,0	0/0:13,0:13:29.95:0,30,335	1/1:28,0:26:30.36:371,30,0	0/1:23,0:20:2.80:223,0,3	0/0:19,0:19:43.05:0,43,459	0/0:18,0:16:35.99:0,36,495	1/1:15,0:14:4.69:32,5,0	1/1:10,0:10:13.60:92,14,0	1/1:23,0:23:19.74:162,20,0	1/1:35,0:33:24:214,24,0	1/1:23,1:21:35.48:397,35,0	1/1:32,0:29:45.23:553,45,0	1/1:22,1:22:40.61:353,41,0	1/1:14,0:12:18.05:206,18,0	0/0:14,0:14:29.90:0,30,346	0/0:22,0:21:44.51:0,45,571	0/0:19,0:16:38.87:0,39,464	1/1:22,0:22:18.52:268,19,0	1/1:26,0:23:37.40:498,37,0	1/1:27,0:27:38.84:400,39,0	1/1:13,0:10:23.49:238,23,0
chr10	76539534	.	T	TTTG	7511.74	PASS	AB=0.921;AC=38;AF=0.679;AN=56;BaseQRankSum=3.005;DP=604;FS=0.410;HRun=0;HaplotypeScore=131.2882;InbreedingCoeff=0.6509;MQ=56.99;MQ0=27;MQRankSum=0.824;QD=15.78;ReadPosRankSum=5.586;VQSLOD=4.6027;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:33:1.87:324,2,0	0/1:8,2:10:6.23:145,0,6	0/0:22,0:11:11.44:0,11,156	0/1:8,0:5:18.50:19,0,29	1/1:12,24:37:74.36:896,74,0	1/1:21,1:20:38.62:272,39,0	0/1:22,3:25:16.51:224,0,17	1/1:23,2:24:35.08:455,35,0	0/0:13,0:13:29.94:0,30,306	1/1:28,0:26:38.07:445,38,0	0/1:21,0:19:6.98:257,0,7	0/0:19,0:19:52.16:0,52,481	0/0:18,0:16:38.97:0,39,478	1/1:15,0:14:7.30:50,7,0	1/1:9,1:10:16.61:140,17,0	1/1:21,2:23:30.88:259,31,0	1/1:35,0:33:37.11:327,37,0	1/1:10,14:21:39.77:516,40,0	1/1:30,0:27:43.76:571,44,0	1/1:12,11:22:20.12:352,20,0	1/1:3,12:13:18.01:295,18,0	0/0:14,0:14:32.87:0,33,340	0/0:22,0:21:47.75:0,48,538	0/0:20,0:16:38.66:0,39,448	1/1:8,16:25:19.65:370,20,0	1/1:11,15:23:48.76:628,49,0	1/1:4,20:25:38.98:597,39,0	1/1:5,8:10:23.85:369,24,0
chr10	76539535	.	T	TTG	6693.44	PASS	AB=0.914;AC=36;AF=0.643;AN=56;BaseQRankSum=6.552;DP=589;FS=9.724;HRun=0;HaplotypeScore=96.5024;InbreedingCoeff=0.4741;MQ=56.67;MQ0=27;MQRankSum=3.553;QD=14.46;ReadPosRankSum=7.274;VQSLOD=3.4997;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:33:97.04:97,0,157	1/1:6,4:10:0.35:197,0,0	0/0:22,0:11:11.14:0,11,156	0/1:8,0:5:7.89:8,0,29	1/1:34,1:35:60.30:622,60,0	1/1:9,12:19:32.97:408,33,0	0/1:10,13:24:0.09:268,0,0	1/1:3,21:24:57.96:603,58,0	0/0:12,0:12:29.79:0,30,281	1/1:7,19:24:38.55:650,39,0	1/1:8,14:20:2.56:395,3,0	0/0:19,0:19:52.92:0,53,461	0/0:18,0:16:38.98:0,39,445	1/1:4,9:14:8.53:94,9,0	1/1:3,8:11:17.61:196,18,0	1/1:6,15:21:13.71:338,14,0	1/1:11,22:32:54.42:658,54,0	0/1:20,3:20:23:279,0,23	0/1:27,1:25:28.84:281,0,29	1/1:18,3:20:6.30:321,6,0	1/1:15,0:13:17.96:164,18,0	0/0:13,0:13:32.86:0,33,318	0/0:22,0:21:50.89:0,51,518	0/0:20,0:16:38.91:0,39,426	0/1:25,0:25:8.90:158,0,9	1/1:21,4:22:20.28:463,20,0	1/1:24,1:25:18.52:312,19,0	1/1:11,1:9:2.81:182,3,0
chr10	76539536	.	T	TG	2795.04	PASS	AB=0.978;AC=31;AF=0.554;AN=56;BaseQRankSum=9.452;DP=582;FS=16.584;HRun=0;HaplotypeScore=97.8253;InbreedingCoeff=0.1521;MQ=55.49;MQ0=28;MQRankSum=4.195;QD=6.10;ReadPosRankSum=8.019;VQSLOD=1.6937;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:31:22:22,0,185	0/1:10,0:10:15.77:72,0,16	0/0:21,0:10:11.30:0,11,154	0/1:8,0:5:10.71:11,0,48	1/1:35,1:35:27.98:291,28,0	1/1:16,5:19:21.09:256,21,0	0/1:23,2:25:15.98:124,0,16	1/1:23,1:23:11.02:224,11,0	0/0:11,0:11:29.18:0,29,269	1/1:25,0:23:3.20:227,3,0	1/1:22,2:21:5.02:236,5,0	0/0:20,0:20:52.13:0,52,428	0/0:17,0:15:41.62:0,42,417	1/1:13,1:13:8.57:59,9,0	0/1:10,1:11:1.54:73,0,2	0/1:20,1:21:20.55:102,0,21	1/1:30,4:31:28.59:295,29,0	0/1:23,0:20:28.30:87,0,28	0/1:26,0:23:80.51:209,0,81	0/1:20,0:19:16.64:140,0,17	1/1:15,0:13:16.32:72,16,0	0/0:13,0:13:32.25:0,32,291	0/0:22,0:21:53.84:0,54,506	0/0:20,0:16:38.61:0,39,393	0/1:24,1:25:42.26:71,0,42	1/1:25,0:22:4.32:248,4,0	1/1:26,0:26:3.20:97,3,0	0/1:12,0:9:10.69:63,0,11
chr10	76540205	.	T	TATAC	12713.78	PASS	AB=0.667;AC=39;AF=0.696;AN=56;BaseQRankSum=0.219;DP=421;FS=4.112;HRun=0;HaplotypeScore=129.9191;InbreedingCoeff=0.8431;MQ=63.29;MQ0=1;MQRankSum=-3.797;QD=38.88;ReadPosRankSum=0.093;VQSLOD=4.9376;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,2:20:23.83:389,24,0	1/1:4,5:11:32.92:533,33,0	0/0:13,0:8:5.90:0,6,50	0/0:19,0:13:13.12:0,13,118	1/1:4,0:12:11.98:116,12,0	1/1:8,10:17:41.70:992,42,0	1/1:8,4:12:23.97:475,24,0	1/1:6,33:43:99:2199,117,0	0/0:14,0:14:39.07:0,39,574	1/1:10,10:20:51.04:1034,51,0	1/1:7,14:24:55.67:1208,56,0	0/0:11,0:11:30.03:0,30,385	0/0:6,0:6:18.05:0,18,306	1/1:4,9:14:42.07:901,42,0	1/1:7,13:20:49.77:1169,50,0	0/1:8,7:16:14.50:673,0,15	1/1:10,16:27:67.59:1445,68,0	1/1:12,0:14:20.88:254,21,0	1/1:13,0:12:23.97:222,24,0	1/1:5,0:6:8.93:72,9,0	1/1:8,0:9:17.95:142,18,0	0/0:9,0:9:21.06:0,21,325	0/0:12,0:12:30.02:0,30,365	0/0:10,0:10:27.03:0,27,358	1/1:11,0:13:26.21:229,26,0	1/1:6,0:8:1.76:162,2,0	1/1:11,0:13:32.77:320,33,0	1/1:11,0:13:16.91:180,17,0
chr10	76540238	.	T	TACAC	10391.53	PASS	AB=0.770;AC=40;AF=0.714;AN=56;BaseQRankSum=-0.441;DP=534;FS=5.244;HRun=0;HaplotypeScore=136.0063;InbreedingCoeff=0.7745;MQ=59.78;MQ0=3;MQRankSum=-1.865;QD=25.10;ReadPosRankSum=3.392;VQSLOD=4.1695;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:23:16.58:81,17,0	1/1:2,12:14:21.05:524,21,0	0/0:31,0:19:2.59:0,3,224	0/1:30,0:20:15:15,0,176	1/1:10,3:14:14.77:286,15,0	1/1:6,14:19:23.73:546,24,0	1/1:2,15:18:17.72:330,18,0	1/1:37,0:35:69.14:1014,69,0	0/0:14,0:14:30.06:0,30,430	1/1:3,16:19:51.08:1045,51,0	1/1:5,18:25:14.84:374,15,0	0/0:17,0:17:45.10:0,45,660	0/0:13,0:13:33.04:0,33,453	1/1:3,10:13:24.08:599,24,0	1/1:4,15:20:26.76:674,27,0	0/1:3,17:20:14.78:787,0,15	1/1:10,17:29:23.85:463,24,0	1/1:5,12:17:14.98:374,15,0	1/1:11,5:15:17.64:248,18,0	1/1:1,8:9:12.04:300,12,0	1/1:1,26:28:27.09:674,27,0	0/0:13,0:13:30.53:0,31,423	0/0:14,0:14:36.09:0,36,538	0/0:18,0:18:28.08:0,28,671	1/1:2,15:17:24.08:599,24,0	1/1:5,7:12:24.50:411,24,0	1/1:1,17:18:26.98:674,27,0	1/1:2,9:12:15.05:374,15,0
chr10	76540480	.	GT	G	6119.18	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=9.229;DP=646;FS=7.165;HRun=7;HaplotypeScore=78.3282;InbreedingCoeff=0.9996;MQ=84.56;MQ0=0;MQRankSum=-5.178;QD=26.49;ReadPosRankSum=0.297;VQSLOD=5.3559;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.22:0,72,891	1/1:1,10:11:27.06:275,27,0	0/0:23,0:23:69.13:0,69,826	0/0:25,0:25:60.17:0,60,731	0/0:21,0:21:57.17:0,57,703	1/1:4,24:28:66.14:673,66,0	1/1:0,10:10:27.06:276,27,0	1/1:5,29:34:84.11:831,84,0	0/0:30,0:30:84.27:0,84,1055	1/1:2,16:18:48.11:489,48,0	1/1:3,21:24:66.14:667,66,0	0/0:26,0:26:75.22:0,75,917	0/0:29,0:29:81.21:0,81,1000	1/1:1,19:20:54.12:551,54,0	1/1:2,27:29:81.18:826,81,0	1/1:2,26:28:78.18:796,78,0	1/1:2,27:29:72.16:734,72,0	0/0:22,0:22:60.19:0,60,753	0/0:21,0:21:54.16:0,54,664	0/0:25,0:25:75.24:0,75,942	0/0:10,0:10:30.08:0,30,362	0/0:20,0:20:60.19:0,60,752	0/0:16,0:16:45.14:0,45,564	0/0:24,0:24:63.19:0,63,780	0/0:20,0:20:54.17:0,54,679	0/0:31,0:31:84.27:0,84,1057	0/0:33,0:33:96.25:0,96,1174	0/0:14,0:14:42.13:0,42,526
chr10	76541074	.	ACAG	A	8756.78	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.978;DP=799;FS=3.455;HRun=0;HaplotypeScore=139.5072;InbreedingCoeff=0.9588;MQ=67.92;MQ0=3;MQRankSum=-2.293;QD=35.03;ReadPosRankSum=1.791;VQSLOD=5.7683;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,189,3497	1/1:0,8:8:15.05:255,15,0	0/0:47,0:35:76.18:0,76,1437	0/0:36,0:25:32.49:0,32,988	0/0:29,0:29:86.92:0,87,1402	1/1:7,17:24:40.54:991,41,0	1/1:1,35:36:57.15:936,57,0	1/1:1,27:28:78.12:1027,78,0	0/0:39,0:39:99:0,111,2367	1/1:3,24:27:75.11:978,75,0	1/1:0,11:11:23.97:343,24,0	0/0:29,0:29:84.23:0,84,1734	0/0:29,0:29:84.19:0,84,1706	1/1:0,19:19:45.09:732,45,0	1/1:0,29:29:72.07:1117,72,0	1/1:2,31:33:0.23:1039,0,0	1/1:0,35:35:81.19:1339,81,0	0/0:28,0:28:81.19:0,81,1675	0/0:16,0:16:38.41:0,38,557	0/0:26,0:26:78.09:0,78,1267	0/0:36,0:36:99:0,105,2054	0/0:16,0:16:42.05:0,42,699	0/0:13,0:13:38.93:0,39,512	0/0:46,0:46:99:0,131,2765	0/0:20,0:20:60.14:0,60,1159	0/0:37,0:37:99:0,111,1885	0/0:29,0:29:87.26:0,87,1905	0/0:10,0:10:30.10:0,30,683
chr10	76542982	.	T	TAAAA	7005.15	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-1.305;DP=440;FS=28.206;HRun=11;HaplotypeScore=93.4574;InbreedingCoeff=0.7796;MQ=61.36;MQ0=1;MQRankSum=-2.401;QD=32.89;ReadPosRankSum=-4.608;VQSLOD=0.4892;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:26:64.38:0,64,854	0/0:1,0:1:3.01:0,3,41	0/0:17,0:16:11.57:0,12,215	0/1:11,0:9:63.35:63,0,125	1/1:4,16:25:54.18:994,54,0	0/0:11,0:11:30.10:0,30,406	0/1:8,0:8:3.53:4,0,147	0/0:17,0:17:37.23:0,37,492	0/0:16,0:16:39.06:0,39,529	0/0:28,0:29:25.87:0,26,697	0/1:24,0:24:1.38:1,0,553	0/0:16,0:16:39.07:0,39,528	0/0:13,0:13:39.11:0,39,515	0/0:13,0:13:17.37:0,17,300	0/0:8,0:7:15.01:0,15,204	0/0:8,0:8:11.92:0,12,163	0/0:14,0:14:33:0,33,427	1/1:3,14:20:36.12:717,36,0	1/1:8,10:21:54.17:938,54,0	1/1:2,10:15:33.11:585,33,0	1/1:3,4:9:12.04:236,12,0	0/0:6,0:6:15.04:0,15,204	0/0:20,0:20:38.94:0,39,526	0/0:9,0:9:24.05:0,24,327	1/1:3,16:21:51.17:965,51,0	1/1:2,16:21:51.15:1035,51,0	1/1:9,13:24:45.15:875,45,0	1/1:3,8:13:27.09:593,27,0
chr10	76544316	.	G	GGAGA	1861.16	PASS	AB=0.914;AC=31;AF=0.596;AN=52;BaseQRankSum=1.127;DP=588;FS=14.213;HRun=0;HaplotypeScore=118.8843;InbreedingCoeff=0.3010;MQ=66.83;MQ0=11;MQRankSum=-2.414;QD=5.46;ReadPosRankSum=-2.653;VQSLOD=1.0864;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:11.90:0,12,161	0/1:5,0:5:0:0,0,0	./.	./.	1/1:16,0:15:6.02:106,6,0	1/1:23,0:23:2.97:20,3,0	0/0:22,0:21:0.17:0,0,1	1/1:30,0:30:15.01:238,15,0	0/1:19,0:26:15.88:16,0,38	1/1:18,0:17:6.96:100,7,0	0/1:11,0:11:0:0,0,0	0/0:26,0:26:23.64:0,24,351	0/0:16,0:16:9.03:0,9,139	1/1:22,0:22:6.02:131,6,0	0/0:9,0:11:3:0,3,28	1/1:11,0:10:3.01:53,3,0	1/1:18,0:18:9.92:145,10,0	0/1:9,1:15:31.06:93,0,31	1/1:17,0:17:3.01:68,3,0	1/1:15,0:15:3.01:65,3,0	1/1:23,0:22:17.97:177,18,0	0/0:18,0:22:9.01:0,9,99	0/0:29,0:27:13.23:0,13,113	0/1:21,0:24:13.93:61,0,14	1/1:17,3:22:5.47:122,5,0	1/1:9,2:14:21.04:310,21,0	0/1:18,0:18:34.16:136,0,34	0/1:11,0:12:11.54:176,0,12
chr10	76545059	.	G	GAC	3818.03	PASS	AB=0.902;AC=22;AF=0.407;AN=54;BaseQRankSum=-5.497;DP=927;FS=3.845;HRun=0;HaplotypeScore=161.6265;InbreedingCoeff=0.2471;MQ=50.72;MQ0=22;MQRankSum=-2.130;QD=7.76;ReadPosRankSum=-1.777;VQSLOD=3.3112;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:56:40.30:0,40,458	1/1:8,1:8:5.91:63,6,0	./.	0/1:33,0:11:0:0,0,0	0/1:21,0:21:4.23:4,0,38	0/1:19,10:28:30.67:424,0,31	1/1:49,8:53:27.64:737,28,0	1/1:37,1:29:15.45:166,15,0	0/0:41,0:42:74.13:0,74,716	0/1:33,5:35:73.31:462,0,73	1/1:14,1:15:12.02:162,12,0	0/0:38,0:39:60.10:0,60,662	0/0:33,0:35:59.93:0,60,625	1/1:31,3:31:32.55:421,33,0	0/1:19,21:38:12.55:300,0,13	1/1:26,10:35:57.91:718,58,0	0/1:14,7:23:23.01:272,0,23	0/0:23,0:28:2.63:0,3,100	0/0:8,0:8:3.31:0,3,15	0/1:24,1:26:16.89:28,0,17	0/0:51,0:46:9:0,9,90	0/0:35,0:33:26.98:0,27,282	0/0:19,0:20:17.94:0,18,188	0/0:55,1:59:74.92:0,75,1313	0/1:19,0:24:1.25:1,0,72	0/1:35,0:41:48.02:48,0,89	0/1:12,0:20:12.62:13,0,64	0/0:5,0:23:4.88:0,5,20
chr10	76545081	.	C	CAG	1942.88	PASS	AB=0.975;AC=20;AF=0.385;AN=52;BaseQRankSum=8.054;DP=908;FS=4.416;HRun=0;HaplotypeScore=186.8869;InbreedingCoeff=-0.0151;MQ=45.12;MQ0=30;MQRankSum=4.707;QD=3.66;ReadPosRankSum=2.274;VQSLOD=2.0417;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:46:47.94:0,48,651	1/1:6,0:4:5.88:38,6,0	./.	./.	1/1:14,6:18:26.31:169,26,0	0/1:40,0:37:99:187,0,110	0/1:73,0:68:76.99:252,0,77	0/0:62,0:42:47.94:0,48,556	0/0:42,0:40:99:0,102,1259	0/1:50,0:45:99:132,0,479	1/1:13,0:12:8.86:64,9,0	0/0:31,0:31:77.91:0,78,1030	0/0:35,0:33:78.10:0,78,1015	0/1:36,0:32:8.24:154,0,8	0/1:41,0:39:99:112,0,146	0/1:36,0:35:48.26:219,0,48	0/1:23,0:22:79.55:100,0,80	0/1:24,1:24:41.02:82,0,41	0/0:21,0:15:23.44:0,23,190	0/1:24,1:23:28.38:199,0,28	0/1:55,5:50:14.81:117,0,15	0/0:30,0:28:36.07:0,36,475	0/0:19,0:18:27.04:0,27,340	0/0:64,0:64:99:0,155,2217	1/1:19,2:21:13.12:123,13,0	0/1:34,3:34:99:120,0,133	0/1:23,2:23:45.15:45,0,53	0/0:19,0:19:3.45:0,3,22
chr10	76545099	.	CAG	C	40.81	PASS	AB=0.988;AC=11;AF=0.204;AN=54;BaseQRankSum=6.866;DP=869;FS=7.447;HRun=0;HaplotypeScore=176.8144;InbreedingCoeff=-0.1004;MQ=43.89;MQ0=32;MQRankSum=-0.149;QD=0.17;ReadPosRankSum=-3.959;VQSLOD=1.1011;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:38:13.77:0,14,405	0/1:7,1:6:18.87:19,0,52	./.	0/1:10,0:4:8.24:8,0,9	0/0:13,0:12:13.67:0,14,111	0/1:37,0:34:30.76:31,0,75	0/0:58,0:55:32.89:0,33,480	0/0:76,0:58:99:0,124,1791	0/0:45,0:43:84.29:0,84,1688	0/0:49,1:45:24.56:0,25,1142	1/1:13,0:12:0.60:28,1,0	0/0:32,0:32:81.08:0,81,1172	0/0:36,0:34:84.68:0,85,1418	0/1:42,0:38:31.53:32,0,170	0/1:33,0:31:11.05:11,0,186	0/1:34,0:33:9.55:10,0,194	0/0:21,1:20:12.35:0,12,277	0/1:20,0:18:10.29:10,0,222	0/0:23,0:17:43.08:0,43,477	0/1:16,0:14:1.32:1,0,99	0/0:51,1:41:26.99:0,27,319	0/0:21,0:19:30.03:0,30,404	0/0:22,0:21:30.06:0,30,488	0/0:69,0:69:99:0,169,2969	0/0:16,0:16:14.71:0,15,144	0/0:33,0:29:2.06:0,2,500	0/1:28,0:25:23.08:23,0,326	0/0:13,0:13:3.01:0,3,44
chr10	76545117	.	CAGACACAG	C	3793.54	PASS	AB=0.825;AC=35;AF=0.673;AN=52;BaseQRankSum=10.062;DP=844;FS=2.265;HRun=0;HaplotypeScore=207.0765;InbreedingCoeff=0.6406;MQ=45.99;MQ0=20;MQRankSum=-8.399;QD=6.59;ReadPosRankSum=-3.354;VQSLOD=1.9714;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,3:27:4.28:120,4,0	1/1:7,0:7:5.54:134,6,0	0/0:22,0:5:6.33:0,6,110	0/1:34,0:14:2.51:3,0,157	0/1:12,3:13:0.01:0,0,0	1/1:18,15:31:9.45:124,9,0	1/1:51,6:52:17.05:280,17,0	1/1:74,0:62:35.18:523,35,0	0/0:41,0:39:96.33:0,96,2612	1/1:38,3:39:22.48:642,22,0	1/1:13,1:13:3:67,3,0	0/0:33,0:33:68.60:0,69,1698	0/0:34,0:33:81.18:0,81,2140	0/1:18,23:37:69.36:69,0,99	1/1:22,3:23:12.03:231,12,0	1/1:20,18:37:5.99:134,6,0	1/1:25,0:23:11.70:172,12,0	1/1:7,10:16:3.48:65,3,0	1/1:13,3:14:21.04:380,21,0	1/1:13,3:15:3.48:75,3,0	1/1:18,22:35:5.29:48,5,0	0/0:25,0:25:51.17:0,51,1036	0/0:24,0:24:48.02:0,48,1070	0/0:71,0:71:99:0,178,4754	./.	1/1:19,4:21:24.08:423,24,0	1/1:9,20:27:11.91:303,12,0	./.
chr10	76545123	.	CAG	C	2119.35	PASS	AB=0.826;AC=22;AF=0.423;AN=52;BaseQRankSum=9.897;DP=811;FS=0.000;HRun=0;HaplotypeScore=155.5720;InbreedingCoeff=-0.0954;MQ=46.31;MQ0=19;MQRankSum=-6.757;QD=4.39;ReadPosRankSum=-1.601;VQSLOD=2.6783;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,12:28:16.37:75,0,16	0/1:4,4:8:15.96:77,0,16	0/0:27,0:5:6.27:0,6,110	0/0:38,0:15:5.05:0,5,196	0/0:6,7:12:1.18:0,1,3	0/1:29,1:28:19.68:44,0,20	0/1:47,11:54:99:278,0,169	0/1:56,7:53:99:306,0,432	0/0:42,0:40:99:0,108,1908	0/1:29,8:35:99:383,0,301	1/1:9,4:12:3.01:43,3,0	0/0:32,0:32:81.11:0,81,1318	0/0:33,0:32:82.99:0,83,1449	0/1:39,2:37:26.89:27,0,117	1/1:18,8:24:18.03:212,18,0	1/1:33,2:34:5.99:64,6,0	0/1:11,12:21:84.58:110,0,85	0/1:13,1:13:25.47:34,0,25	1/1:10,3:11:1.93:175,2,0	0/1:8,5:13:13.51:33,0,14	1/1:33,0:29:3.32:43,3,0	0/0:28,0:28:66.14:0,66,1052	0/0:25,0:25:57.01:0,57,904	0/0:73,0:73:99:0,201,3392	./.	0/1:13,5:18:84.38:262,0,84	0/1:25,1:25:51.78:114,0,52	./.
chr10	76545131	.	CAGAG	C	1265.23	PASS	AB=0.895;AC=21;AF=0.389;AN=54;BaseQRankSum=8.053;DP=792;FS=0.000;HRun=0;HaplotypeScore=176.6335;InbreedingCoeff=-0.0925;MQ=46.25;MQ0=22;MQRankSum=-8.278;QD=2.90;ReadPosRankSum=0.608;VQSLOD=2.4729;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,1:28:7.52:19,0,8	0/1:4,2:6:19.84:20,0,44	0/0:30,0:5:12.71:0,13,201	0/0:44,0:15:12.83:0,13,332	1/1:14,0:13:0.93:2,1,0	1/1:17,7:23:9.37:90,9,0	0/1:41,7:45:18.30:18,0,188	0/1:51,6:45:99:548,0,180	0/0:44,0:43:99:0,108,2826	0/1:30,6:34:99:431,0,239	1/1:9,2:9:2.83:14,3,0	0/0:31,0:31:80.64:0,81,2066	0/0:34,0:33:87.20:0,87,2080	0/1:30,11:38:9.97:10,0,190	0/1:20,5:23:22.23:22,0,72	0/1:26,8:33:45.51:46,0,83	0/1:19,2:19:17.86:18,0,81	0/1:15,0:15:1.40:1,0,106	0/1:12,0:10:11.78:74,0,12	1/1:15,0:13:3.45:22,3,0	0/0:31,0:27:4.32:0,4,67	0/0:30,0:30:75.26:0,75,1978	0/0:23,0:23:63.20:0,63,1584	0/0:72,0:72:99:0,208,5201	0/0:15,0:15:0:0,0,0	0/1:21,0:21:5.96:6,0,384	0/1:25,0:23:34.51:75,0,35	./.
chr10	76545228	.	C	CACACACAG	5098.20	PASS	AB=0.978;AC=25;AF=0.446;AN=56;BaseQRankSum=2.369;DP=749;FS=8.107;HRun=0;HaplotypeScore=266.4740;InbreedingCoeff=0.4712;MQ=48.44;MQ0=17;MQRankSum=-4.999;QD=12.59;ReadPosRankSum=-1.810;VQSLOD=2.2617;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:27:6.56:219,7,0	1/1:7,0:7:15.04:315,15,0	0/0:20,0:3:3:0,3,26	0/0:24,0:10:2.92:0,3,17	0/0:21,0:17:13.65:0,14,153	1/1:24,3:25:19.07:386,19,0	1/1:33,0:25:5.70:110,6,0	1/1:36,0:23:14.63:118,15,0	0/0:33,0:32:56.30:0,56,1437	1/1:42,3:44:78.09:1369,78,0	1/1:10,15:28:4.06:238,4,0	0/0:49,0:49:99:0,99,1836	0/0:28,0:26:60.13:0,60,1189	0/1:29,4:33:47.95:516,0,48	1/1:21,0:21:15:192,15,0	1/1:29,2:31:35.99:695,36,0	1/1:26,1:27:27.42:372,27,0	0/1:15,0:14:71.90:117,0,72	0/1:23,0:18:72.42:72,0,73	0/0:10,0:9:9.48:0,9,139	0/0:23,0:15:1.35:0,1,3	0/0:25,0:25:51.14:0,51,1069	0/0:30,0:30:66.16:0,66,1371	0/0:57,0:57:99:0,120,2372	0/0:19,0:18:20.47:0,20,261	0/1:37,0:37:99:247,0,394	0/1:12,0:12:99:132,0,121	0/0:5,0:5:0.93:0,1,72
chr10	76545242	.	C	CAGACACAT	2508.89	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=6.396;DP=741;FS=8.303;HRun=0;HaplotypeScore=273.3826;InbreedingCoeff=-0.0829;MQ=45.42;MQ0=15;MQRankSum=-5.354;QD=6.80;ReadPosRankSum=2.574;VQSLOD=0.8119;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,19:39:9.19:276,9,0	0/1:8,0:9:56.90:174,0,57	0/0:10,0:4:3.01:0,3,51	0/0:23,0:6:11.84:0,12,126	0/0:22,0:18:15.78:0,16,235	0/1:30,0:29:99:201,0,111	0/1:37,0:29:16.05:16,0,204	0/0:30,0:21:13:0,13,205	0/0:30,0:29:77.51:0,78,1755	0/1:47,0:46:99:721,0,166	0/1:28,0:27:99:185,0,105	0/0:47,0:47:99:0,105,2322	0/0:26,0:24:63.19:0,63,1458	0/1:32,0:32:99:309,0,117	1/1:19,0:19:6.95:74,7,0	0/1:29,0:29:95.70:394,0,96	0/1:28,0:28:40.29:199,0,40	0/1:15,0:14:27.77:28,0,177	0/0:21,0:18:6.72:0,7,214	0/0:8,0:8:9.50:0,10,169	0/0:26,0:18:8.94:0,9,67	0/0:22,0:22:54.17:0,54,1307	0/0:29,0:29:75.21:0,75,1713	0/0:50,0:50:99:0,135,3010	0/0:20,0:19:29.20:0,29,416	0/1:39,0:39:35.59:36,0,707	0/1:16,0:16:57.36:57,0,197	0/0:6,0:6:8.94:0,9,121
chr10	76545244	.	GACACACAC	G	6000.12	PASS	AB=0.982;AC=26;AF=0.464;AN=56;BaseQRankSum=2.299;DP=745;FS=16.863;HRun=0;HaplotypeScore=254.8519;InbreedingCoeff=0.3504;MQ=44.46;MQ0=15;MQRankSum=-6.659;QD=14.93;ReadPosRankSum=-1.466;VQSLOD=1.8866;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:15.77:0,16,189	0/1:10,0:10:75.82:76,0,248	0/0:11,0:4:8.94:0,9,70	0/0:23,0:5:8.95:0,9,135	1/1:14,8:18:13.10:336,13,0	0/1:30,0:29:5.94:6,0,425	0/0:36,0:29:32.63:0,33,520	0/1:24,4:20:72.14:72,0,314	0/0:30,0:29:78.21:0,78,2543	0/1:49,0:48:99:236,0,903	0/0:27,0:26:12.05:0,12,235	0/0:46,0:46:99:0,108,3153	0/0:25,0:24:66.16:0,66,2014	0/1:31,0:31:99:120,0,540	0/1:19,0:19:34.82:35,0,187	0/1:29,0:29:99:109,0,437	0/1:28,0:28:77.90:78,0,316	1/1:10,7:16:0.13:567,0,0	1/1:16,5:18:44.82:738,45,0	1/1:1,7:8:8.35:244,8,0	1/1:26,1:18:7.17:137,7,0	0/0:23,0:23:63.12:0,63,2008	0/0:29,0:29:72.19:0,72,2426	0/0:50,0:51:99:0,132,4135	1/1:11,9:19:21.21:618,21,0	1/1:21,18:39:90.01:1868,90,0	1/1:10,6:16:29.25:520,29,0	1/1:4,3:7:12.01:240,12,0
chr10	76545369	.	A	AGC	2192.57	PASS	AB=0.774;AC=18;AF=0.321;AN=56;BaseQRankSum=-0.560;DP=704;FS=15.107;HRun=0;HaplotypeScore=123.9303;InbreedingCoeff=0.4563;MQ=67.64;MQ0=8;MQRankSum=-3.846;QD=7.56;ReadPosRankSum=3.168;VQSLOD=2.6375;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:69.63:0,70,654	0/0:9,0:9:12.84:0,13,114	0/0:24,0:17:34.97:0,35,391	0/0:27,0:18:43.84:0,44,412	0/1:6,22:31:4.44:245,0,4	0/0:22,0:20:15.58:0,16,231	0/0:26,0:26:41.33:0,41,351	0/0:32,0:26:72.09:0,72,608	0/0:23,0:22:25.19:0,25,367	0/0:20,0:19:24.80:0,25,332	0/1:9,0:9:14.31:14,0,61	0/0:29,0:29:65.85:0,66,561	0/0:21,0:21:44.90:0,45,381	0/1:20,0:20:5.75:6,0,122	0/1:18,0:18:16.78:17,0,146	0/0:31,0:31:23.77:0,24,258	0/0:35,0:35:1.33:0,1,349	1/1:14,5:19:40.81:482,41,0	1/1:7,18:24:21.05:315,21,0	1/1:27,1:28:15.11:390,15,0	0/1:8,30:37:63.19:94,0,63	0/0:34,0:34:71.63:0,72,649	0/0:15,0:15:29.99:0,30,306	0/0:33,0:33:77.51:0,78,761	1/1:2,11:14:6.02:114,6,0	1/1:41,2:43:1.79:432,2,0	1/1:21,0:21:26.42:216,26,0	0/1:3,21:24:25.84:52,0,26
chr10	76551797	.	C	CGTGT	1215.99	PASS	AB=0.866;AC=20;AF=0.476;AN=42;BaseQRankSum=-2.068;DP=555;FS=4.691;HRun=0;HaplotypeScore=117.0428;InbreedingCoeff=0.2997;MQ=72.79;MQ0=25;MQRankSum=0.561;QD=5.36;ReadPosRankSum=-2.873;VQSLOD=1.1219;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,10:39:5.93:112,6,0	0/1:9,1:10:13.52:208,0,14	./.	./.	1/1:11,0:16:3.22:13,3,0	0/0:8,0:15:0:0,0,0	0/1:16,3:19:33.22:131,0,33	1/1:17,0:17:2.96:19,3,0	0/0:19,0:18:12.03:0,12,156	1/1:16,0:21:14.67:148,15,0	1/1:6,0:6:3.01:63,3,0	0/1:19,0:22:18.27:18,0,105	0/0:27,0:27:19.82:0,20,260	1/1:10,0:15:5.75:82,6,0	1/1:11,4:15:6.02:140,6,0	1/1:7,6:15:9.24:153,9,0	0/1:16,10:29:99:273,0,111	0/0:18,0:27:12.01:0,12,112	0/0:22,0:24:3:0,3,27	0/0:16,0:19:3:0,3,28	./.	0/0:13,0:12:3:0,3,27	./.	0/0:39,0:39:32.74:0,33,476	./.	./.	0/0:7,0:13:5.71:0,6,55	./.
chr10	76553937	.	CT	C	7979.85	PASS	AC=18;AF=0.333;AN=54;BaseQRankSum=15.199;DP=783;FS=0.614;HRun=2;HaplotypeScore=70.5040;InbreedingCoeff=0.9834;MQ=55.55;MQ0=31;MQRankSum=0.412;QD=32.57;ReadPosRankSum=1.590;VQSLOD=4.7413;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:96.30:0,96,1385	0/0:14,0:14:42.13:0,42,611	0/0:21,0:2:6.02:0,6,89	./.	1/1:2,27:27:69.18:869,69,0	0/0:31,0:31:93.32:0,93,1393	0/0:33,0:32:93.31:0,93,1392	0/0:39,0:33:96.29:0,96,1406	0/0:33,0:33:99:0,99,1425	0/0:29,0:28:84.28:0,84,1237	0/0:28,0:27:81.26:0,81,1193	0/0:33,0:33:96.32:0,96,1415	0/0:26,0:26:75.23:0,75,1083	0/0:34,0:34:99:0,102,1486	0/0:29,0:29:87.28:0,87,1275	0/0:23,0:23:66.20:0,66,950	0/0:23,0:23:63.18:0,63,898	1/1:2,53:56:99:1785,124,0	1/1:3,17:17:48.11:589,48,0	1/1:0,23:22:60.10:722,60,0	1/1:0,25:25:69.22:892,69,0	0/0:28,0:27:78.25:0,78,1134	0/0:19,0:18:54.14:0,54,749	0/0:32,0:32:95.95:0,96,1330	1/1:0,26:26:69.22:895,69,0	1/1:2,23:25:66.19:827,66,0	1/1:0,22:21:57.19:739,57,0	1/1:0,19:19:51.17:662,51,0
chr10	76555272	.	T	TA	2446.76	PASS	AB=0.883;AC=23;AF=0.411;AN=56;BaseQRankSum=-9.226;DP=579;FS=0.415;HRun=13;HaplotypeScore=89.8308;InbreedingCoeff=0.4626;MQ=69.32;MQ0=1;MQRankSum=1.325;QD=8.08;ReadPosRankSum=-1.880;VQSLOD=2.4809;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:49:71.19:0,71,206	1/1:2,5:7:9.01:84,9,0	0/1:18,0:15:19.62:20,0,29	0/0:11,0:10:14.13:0,14,88	0/1:22,0:22:31.76:32,0,112	1/1:3,19:23:41.89:376,42,0	1/1:3,19:23:18.30:300,18,0	1/1:8,18:29:41.74:458,42,0	0/0:16,1:17:4.29:0,4,175	1/1:7,21:29:40.12:474,40,0	0/1:7,6:13:7.47:63,0,7	0/0:16,0:16:26.68:0,27,185	0/0:16,0:16:38.57:0,39,262	1/1:7,13:21:3.71:153,4,0	1/1:7,12:21:6.21:178,6,0	1/1:1,14:15:29.93:266,30,0	0/1:6,19:26:24.49:202,0,24	0/0:27,0:30:24.29:0,24,306	0/0:14,0:15:25.72:0,26,169	0/0:14,0:15:22.69:0,23,148	0/0:25,0:25:38.48:0,38,266	0/0:14,0:14:17.79:0,18,123	0/0:14,0:14:20.65:0,21,142	0/1:25,2:28:1.19:1,0,265	0/1:17,0:18:26.60:27,0,103	0/0:20,0:21:32.97:0,33,225	0/0:33,0:33:58.54:0,59,409	0/1:10,0:10:7.35:7,0,93
chr10	76555764	.	CAGA	C	10145.89	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.991;DP=703;FS=3.009;HRun=0;HaplotypeScore=102.9493;InbreedingCoeff=0.9994;MQ=86.89;MQ0=0;MQRankSum=-4.789;QD=40.75;ReadPosRankSum=0.592;VQSLOD=5.9191;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,2544	1/1:1,7:8:20.99:311,21,0	0/0:33,0:33:74.59:0,75,1588	0/0:25,0:25:60.07:0,60,1177	0/0:24,0:24:69.24:0,69,1517	1/1:1,23:24:57.13:900,57,0	1/1:0,24:24:66.16:1046,66,0	1/1:3,34:37:99:1591,99,0	0/0:25,0:25:75.26:0,75,1675	1/1:3,33:36:99:1554,99,0	1/1:0,22:22:60.12:947,60,0	0/0:27,0:27:81.26:0,81,1767	0/0:20,0:20:60.19:0,60,1298	1/1:1,21:22:56.90:804,57,0	1/1:2,29:31:69.03:1034,69,0	1/1:2,16:18:48.16:782,48,0	1/1:1,26:27:72.25:1175,72,0	0/0:17,0:17:48.15:0,48,1020	0/0:17,0:17:48.16:0,48,1041	0/0:34,0:34:93.29:0,93,1947	0/0:24,0:24:72.23:0,72,1561	0/0:26,0:26:72.22:0,72,1511	0/0:20,0:20:57.18:0,57,1217	0/0:26,0:26:75.21:0,75,1616	0/0:12,0:12:36.12:0,36,778	0/0:33,0:33:74.34:0,74,2040	0/0:28,0:28:78.22:0,78,1612	0/0:22,0:22:66.23:0,66,1432
chr10	76556101	.	CTCTG	C	6969.30	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.311;DP=626;FS=14.762;HRun=0;HaplotypeScore=107.4202;InbreedingCoeff=0.9938;MQ=80.60;MQ0=0;MQRankSum=-6.438;QD=38.50;ReadPosRankSum=2.425;VQSLOD=4.5762;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.25:0,72,1801	0/0:6,0:6:12.04:0,12,305	0/0:29,0:29:65.01:0,65,1373	0/0:24,0:23:57.10:0,57,1266	1/1:2,19:21:42.07:664,42,0	0/0:21,0:21:60.21:0,60,1511	0/0:33,0:33:87.30:0,87,2179	0/0:32,0:32:78.26:0,78,1901	0/0:27,0:27:78.27:0,78,1972	0/0:18,0:18:45.15:0,45,1111	0/0:19,0:19:51.18:0,51,1263	0/0:21,0:21:51.17:0,51,1286	0/0:20,0:20:57.20:0,57,1437	0/0:24,0:24:60.21:0,60,1499	0/0:30,0:30:72.23:0,72,1740	0/0:21,0:21:60.21:0,60,1519	0/0:29,0:29:87.30:0,87,2155	1/1:3,24:26:54.18:939,54,0	1/1:5,16:21:48.16:830,48,0	1/1:3,24:27:60.21:1027,60,0	1/1:2,16:18:48.16:832,48,0	0/0:26,0:26:60.19:0,60,1453	0/0:11,0:11:27.09:0,27,680	0/0:27,0:27:75.26:0,75,1888	1/1:0,8:8:18.06:311,18,0	1/1:6,17:23:51.16:854,51,0	1/1:3,17:20:45:781,45,0	1/1:2,14:16:42.14:730,42,0
chr10	76557112	.	CTT	C	4368.85	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=8.627;DP=376;FS=26.901;HRun=14;HaplotypeScore=69.6806;InbreedingCoeff=0.8647;MQ=65.68;MQ0=10;MQRankSum=-0.463;QD=16.06;ReadPosRankSum=2.409;VQSLOD=1.9140;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:19:9.98:50,10,0	1/1:1,5:6:11.99:110,12,0	0/0:33,0:11:12.03:0,12,131	0/0:20,0:4:3.01:0,3,37	1/1:4,15:20:38.27:334,38,0	1/1:2,6:8:21.01:191,21,0	1/1:3,5:8:8.85:82,9,0	1/1:7,9:21:34.90:263,35,0	0/0:9,0:9:27.07:0,27,359	1/1:3,8:12:23.67:196,24,0	1/1:2,15:17:41.87:382,42,0	0/0:7,0:7:15.05:0,15,205	0/0:7,0:8:15.05:0,15,210	1/1:4,4:8:8.97:82,9,0	1/1:0,4:5:11.75:93,12,0	1/1:0,5:4:9.01:82,9,0	1/1:9,23:31:45.31:573,45,0	1/1:6,11:19:32.97:304,33,0	1/1:5,10:16:7.87:214,8,0	1/1:0,11:11:26.81:230,27,0	1/1:0,6:6:18.02:166,18,0	0/0:11,0:12:35.60:0,36,465	0/0:8,0:9:26.15:0,26,296	0/0:4,0:6:15.04:0,15,185	1/1:1,18:19:45.04:415,45,0	1/1:5,13:20:5.98:337,6,0	1/1:2,7:9:9.19:152,9,0	1/1:2,6:8:11.98:111,12,0
chr10	76557887	.	C	CAG	6422.58	PASS	AB=0.727;AC=18;AF=0.321;AN=56;BaseQRankSum=-10.037;DP=664;FS=0.000;HRun=0;HaplotypeScore=76.3256;InbreedingCoeff=0.4661;MQ=74.66;MQ0=5;MQRankSum=2.638;QD=22.54;ReadPosRankSum=0.085;VQSLOD=4.8673;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:37:5.77:606,0,6	1/1:3,4:8:12.04:192,12,0	0/0:30,0:22:32.18:0,32,323	0/0:36,0:29:24.72:0,25,288	0/0:33,0:33:66.20:0,66,791	1/1:3,15:17:0.09:462,0,0	1/1:4,19:23:6.18:588,6,0	0/1:16,19:35:24.76:789,0,25	0/0:21,0:22:50.99:0,51,589	1/1:3,19:23:60.20:945,60,0	0/1:6,10:16:11.80:309,0,12	0/0:22,0:22:51.13:0,51,597	0/0:15,0:16:35.93:0,36,397	1/1:5,16:21:45.15:720,45,0	1/1:5,16:21:39.13:623,39,0	0/1:8,19:27:18:578,0,18	0/1:9,16:24:15.64:534,0,16	0/0:22,0:22:48.08:0,48,545	0/0:20,0:20:33.09:0,33,387	0/0:21,0:21:45.10:0,45,523	0/0:25,0:25:51.15:0,51,611	0/0:19,0:19:42.11:0,42,478	0/0:20,0:20:45.11:0,45,516	0/0:33,1:34:27.21:0,27,789	0/0:22,0:22:44.70:0,45,521	0/1:26,3:29:77.81:78,0,617	0/0:25,0:25:51.13:0,51,590	0/0:12,0:12:30.09:0,30,360
chr10	76557902	.	A	AGG	3116.30	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=10.556;DP=677;FS=1.973;HRun=1;HaplotypeScore=86.0453;InbreedingCoeff=0.0261;MQ=72.23;MQ0=6;MQRankSum=0.702;QD=11.72;ReadPosRankSum=6.390;VQSLOD=0.7469;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,41:42:33.55:1105,34,0	0/1:7,0:7:31.95:74,0,32	0/0:37,0:29:81.03:0,81,940	0/0:35,0:26:24.64:0,25,526	0/0:30,0:30:87.20:0,87,1181	0/1:19,0:18:56.73:200,0,57	0/1:25,0:25:99:234,0,115	0/1:35,0:34:99:226,0,389	0/0:27,0:27:81.10:0,81,1002	0/1:26,0:26:96.49:302,0,96	0/1:20,0:20:99:117,0,196	0/0:19,0:19:57.17:0,57,827	0/0:17,0:17:51.06:0,51,645	1/1:19,0:19:0.90:302,1,0	0/1:22,0:22:94.85:257,0,95	0/1:27,0:27:99:233,0,182	0/1:23,0:22:99:225,0,110	0/0:24,0:24:69.14:0,69,897	0/0:22,0:22:63.07:0,63,745	0/0:20,0:20:60.13:0,60,807	0/0:25,0:25:75.13:0,75,972	0/0:20,0:20:57.07:0,57,757	0/0:21,0:21:63.10:0,63,827	0/0:31,0:31:70.22:0,70,1220	0/0:24,0:24:68.73:0,69,877	0/0:24,0:24:11.04:0,11,841	0/0:22,0:22:66.14:0,66,887	0/0:12,0:12:30.10:0,30,457
chr10	76558686	.	CCCT	C	10799.40	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=18.177;DP=732;FS=18.339;HRun=0;HaplotypeScore=125.1800;InbreedingCoeff=0.9998;MQ=82.22;MQ0=0;MQRankSum=-3.536;QD=42.85;ReadPosRankSum=4.194;VQSLOD=5.2345;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,2584	0/0:11,0:11:33.11:0,33,813	0/0:16,0:16:45.12:0,45,961	0/0:28,0:28:71.20:0,71,1782	1/1:0,24:24:39.13:709,39,0	0/0:18,0:18:54.19:0,54,1292	0/0:29,0:29:87.25:0,87,1921	0/0:27,0:27:78.26:0,78,1789	0/0:44,0:44:99:0,132,3088	0/0:28,0:28:84.28:0,84,1932	0/0:16,0:16:48.16:0,48,1150	0/0:25,0:25:75.26:0,75,1823	0/0:27,0:27:81.26:0,81,1918	0/0:28,0:28:84.29:0,84,2070	0/0:33,0:33:99:0,99,2385	0/0:21,0:21:63.22:0,63,1497	0/0:39,0:39:99:0,117,2709	1/1:0,33:33:84.29:1535,84,0	1/1:1,14:15:42.09:700,42,0	1/1:0,18:18:36.12:654,36,0	1/1:0,69:69:99:2753,153,0	0/0:19,0:19:57.20:0,57,1403	0/0:13,0:13:39.13:0,39,958	0/0:23,0:23:69.22:0,69,1596	1/1:0,20:20:48.16:876,48,0	1/1:1,37:38:34.37:1768,34,0	1/1:0,24:24:66.23:1202,66,0	1/1:0,11:11:33.11:602,33,0
chr10	76559593	.	C	CCTCTCT	5211.21	PASS	AB=1.000;AC=33;AF=0.660;AN=50;BaseQRankSum=0.394;DP=354;FS=5.192;HRun=0;HaplotypeScore=100.6058;InbreedingCoeff=0.6572;MQ=71.82;MQ0=3;MQRankSum=-5.973;QD=24.47;ReadPosRankSum=-4.689;VQSLOD=3.1888;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:16:21.07:0,21,293	1/1:4,0:4:3.01:71,3,0	0/0:24,0:16:3.44:0,3,20	0/0:42,0:24:10.80:0,11,154	./.	1/1:14,0:13:6.02:157,6,0	1/1:9,0:9:5.94:157,6,0	1/1:20,0:19:26.03:677,26,0	0/0:14,0:14:30.10:0,30,609	1/1:11,0:9:15.05:400,15,0	./.	0/0:3,0:3:9.03:0,9,186	0/0:7,0:7:3.01:0,3,62	1/1:5,0:5:2.89:78,3,0	1/1:7,0:11:11.71:313,12,0	1/1:5,0:6:6.01:103,6,0	1/1:16,0:16:9.03:241,9,0	1/1:13,2:15:18.06:425,18,0	1/1:20,3:22:18.04:475,18,0	./.	1/1:6,2:8:6.02:194,6,0	0/0:6,0:7:18.02:0,18,310	0/0:6,0:5:5.98:0,6,82	0/1:14,0:14:12.45:12,0,309	1/1:11,2:13:17.88:532,18,0	1/1:12,5:18:35.15:812,35,0	1/1:7,6:14:12.04:391,12,0	1/1:8,0:8:7.58:174,8,0
chr10	76559626	.	GATTT	G	567.30	PASS	AB=1.000;AC=7;AF=0.167;AN=42;BaseQRankSum=0.691;DP=264;FS=1.200;HRun=0;HaplotypeScore=65.7234;InbreedingCoeff=0.5360;MQ=61.27;MQ0=7;MQRankSum=1.811;QD=7.88;ReadPosRankSum=0.647;VQSLOD=1.7073;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:17:24.06:0,24,378	0/0:1,0:2:3.01:0,3,52	./.	0/1:39,0:16:0:0,0,0	1/1:4,5:9:14.74:234,15,0	0/0:4,0:4:6.02:0,6,90	./.	0/0:24,0:23:33.10:0,33,569	0/0:9,0:9:9.03:0,9,214	0/0:7,0:5:5.97:0,6,88	0/0:2,0:2:3.01:0,3,40	./.	./.	0/0:3,0:5:6.02:0,6,65	0/0:7,0:8:8.94:0,9,106	0/0:1,0:2:3.01:0,3,37	0/0:13,0:11:19.17:0,19,233	1/1:6,7:12:18.06:277,18,0	0/0:20,0:19:6.02:0,6,142	./.	0/0:5,0:4:3.01:0,3,71	./.	./.	0/0:9,0:8:3.01:0,3,71	1/1:6,5:11:12.04:179,12,0	0/0:13,0:13:12.04:0,12,267	0/0:7,0:7:6.02:0,6,137	0/0:6,0:6:9.03:0,9,213
chr10	76559982	.	CTTT	C	2766.85	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-0.896;DP=498;FS=2.114;HRun=13;HaplotypeScore=82.9179;InbreedingCoeff=0.8461;MQ=73.61;MQ0=3;MQRankSum=-0.422;QD=17.85;ReadPosRankSum=3.312;VQSLOD=2.6639;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:39:99:0,100,1496	0/0:0,0:5:13.91:0,14,148	0/0:17,0:15:6.47:0,6,122	0/0:14,0:10:5.57:0,6,23	1/1:6,15:19:32.64:372,33,0	0/0:5,0:12:33.08:0,33,420	0/0:3,0:19:30.06:0,30,417	0/0:28,0:36:66.30:0,66,908	0/0:20,0:22:48.10:0,48,774	0/0:5,0:10:24.07:0,24,338	0/0:3,0:19:27.78:0,28,337	0/0:24,0:25:47.97:0,48,663	0/0:9,0:9:18.06:0,18,324	0/1:4,0:12:1.03:1,0,175	0/0:7,0:23:35.92:0,36,500	0/0:3,0:10:17.66:0,18,254	0/0:6,0:24:26.79:0,27,516	1/1:0,13:13:30.09:365,30,0	1/1:2,15:17:39.04:426,39,0	1/1:3,9:10:11.99:138,12,0	1/1:6,17:23:9:335,9,0	0/0:12,0:11:26.98:0,27,444	0/0:17,0:16:42.09:0,42,699	0/0:18,0:23:57.06:0,57,859	1/1:1,7:8:1.05:132,1,0	1/1:4,10:14:35.82:412,36,0	1/1:4,20:23:45.11:546,45,0	1/1:1,10:11:5.11:236,5,0
chr10	76561185	.	TCCC	T	835.37	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.839;DP=410;FS=0.000;HRun=12;HaplotypeScore=78.6509;InbreedingCoeff=0.5272;MQ=85.91;MQ0=3;MQRankSum=-1.796;QD=26.11;ReadPosRankSum=3.298;VQSLOD=2.8485;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:32:78.07:930,78,0	0/0:3,0:3:6.02:0,6,103	0/0:34,0:32:51.13:0,51,892	0/0:15,0:12:17.86:0,18,207	0/0:20,0:20:51.17:0,51,745	0/0:2,0:8:3.48:0,3,44	0/0:6,0:14:6.48:0,6,103	0/0:9,0:10:15.05:0,15,251	0/0:10,0:10:19.31:0,19,300	0/0:5,0:5:3:0,3,28	0/0:7,0:7:7.90:0,8,139	0/0:8,0:10:15.03:0,15,232	0/0:13,0:16:33.07:0,33,509	0/0:9,0:13:6.02:0,6,115	0/0:10,0:10:18.06:0,18,281	0/0:5,0:5:12.04:0,12,182	0/0:14,0:14:18.04:0,18,265	0/0:20,0:20:54.17:0,54,737	0/0:17,0:17:30.10:0,30,383	0/0:13,0:14:31.65:0,32,420	0/0:29,0:29:78.17:0,78,1032	0/0:8,0:11:20.82:0,21,340	0/0:6,0:6:15.03:0,15,260	0/0:14,0:16:33.07:0,33,504	0/0:19,0:19:48.16:0,48,636	0/0:20,0:21:53.99:0,54,704	0/0:21,0:21:63.17:0,63,838	0/0:8,0:8:24.08:0,24,351
chr10	76561953	.	CT	C	2856.63	PASS	AB=0.847;AC=18;AF=0.321;AN=56;BaseQRankSum=1.772;DP=498;FS=11.373;HRun=11;HaplotypeScore=83.5161;InbreedingCoeff=0.8217;MQ=65.75;MQ0=10;MQRankSum=1.988;QD=14.43;ReadPosRankSum=5.249;VQSLOD=3.0376;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:23.85:0,24,225	0/0:4,0:4:6:0,6,56	0/0:36,0:22:28.74:0,29,234	0/0:25,0:11:7.14:0,7,115	1/1:5,18:23:55.94:449,56,0	0/0:15,0:14:28.11:0,28,266	0/0:15,0:15:22.91:0,23,208	0/0:31,0:29:40.50:0,41,381	0/1:16,1:15:0.28:0,0,175	0/0:16,0:16:29.47:0,29,226	0/0:12,0:13:16.31:0,16,129	0/0:10,0:10:15.01:0,15,150	0/0:14,0:14:14.55:0,15,114	0/0:10,0:10:15.04:0,15,159	0/0:14,0:13:32.40:0,32,314	0/0:16,0:16:35.20:0,35,288	0/0:17,1:17:2.79:0,3,201	1/1:18,10:27:47.80:388,48,0	1/1:6,14:21:47.15:374,47,0	1/1:8,13:21:41.92:344,42,0	1/1:5,6:10:14.98:123,15,0	0/0:13,0:13:21.94:0,22,223	0/0:11,0:11:21.01:0,21,208	0/0:15,0:14:24.06:0,24,256	1/1:9,12:21:20.95:368,21,0	1/1:8,11:19:47.91:393,48,0	1/1:10,14:24:56.89:466,57,0	0/1:8,3:12:5.97:152,0,6
chr10	76561976	.	T	TTC	243.60	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-0.933;DP=485;FS=9.279;HRun=0;HaplotypeScore=86.5256;InbreedingCoeff=0.5405;MQ=41.87;MQ0=30;MQRankSum=1.934;QD=6.09;ReadPosRankSum=-0.936;VQSLOD=1.9282;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,20:26:28.28:337,28,0	0/0:5,0:4:8.77:0,9,54	0/0:17,0:5:7.81:0,8,54	0/0:15,0:4:2.96:0,3,20	0/0:34,0:33:66.78:0,67,553	0/0:14,0:12:31.99:0,32,219	0/0:14,0:11:11.73:0,12,159	0/0:21,0:19:33.68:0,34,229	0/0:18,0:15:41.69:0,42,310	0/0:15,0:12:25.66:0,26,180	0/1:13,0:13:4.87:5,0,56	0/0:10,0:10:23.87:0,24,203	0/0:13,0:13:23.73:0,24,202	0/0:12,0:12:17.63:0,18,126	0/0:16,0:15:34.83:0,35,221	0/0:13,0:12:35.02:0,35,240	0/0:21,0:18:38.77:0,39,302	0/0:24,0:22:44.41:0,44,367	0/0:23,0:20:53.90:0,54,496	0/0:18,0:16:41.02:0,41,313	0/0:11,0:10:11.96:0,12,97	0/0:9,0:9:20.90:0,21,192	0/0:17,0:17:42.55:0,43,321	0/0:15,0:14:24.86:0,25,257	0/0:28,0:26:68.53:0,69,546	0/0:23,0:21:59.90:0,60,531	0/0:28,0:27:70.57:0,71,539	0/0:11,0:9:20.95:0,21,179
chr10	76561980	.	T	TC	3927.01	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-0.363;DP=467;FS=10.584;HRun=0;HaplotypeScore=63.7511;InbreedingCoeff=0.9392;MQ=38.06;MQ0=31;MQRankSum=1.883;QD=20.14;ReadPosRankSum=3.353;VQSLOD=4.9664;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:20.78:0,21,187	0/0:4,0:4:5.89:0,6,37	0/0:12,0:3:8.50:0,9,68	0/0:10,0:3:5.30:0,5,25	1/1:21,14:34:64.49:629,64,0	0/0:13,0:10:29.71:0,30,217	0/0:15,0:11:26.64:0,27,182	0/0:20,0:18:37.77:0,38,248	0/0:19,0:16:44.61:0,45,321	0/0:15,0:11:32.60:0,33,230	0/0:14,0:14:19.53:0,20,110	0/0:10,0:10:23.70:0,24,185	0/0:14,0:14:19.34:0,19,171	0/0:12,0:12:20.74:0,21,143	0/0:16,0:15:35.39:0,35,242	0/0:12,0:11:32.32:0,32,221	0/0:20,0:17:44.43:0,44,303	1/1:18,6:22:38.93:398,39,0	1/1:10,14:20:42.07:465,42,0	1/1:7,9:14:38.78:352,39,0	1/1:3,5:7:8.93:74,9,0	0/0:8,0:8:17.91:0,18,156	0/0:17,0:17:42.91:0,43,315	0/0:16,0:15:25.16:0,25,224	1/1:13,14:25:60.64:558,61,0	1/1:14,10:22:54.86:550,55,0	1/1:10,16:25:71.72:713,72,0	1/1:8,3:9:17.93:189,18,0
chr10	76562318	.	TG	T	5856.80	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=6.664;DP=460;FS=1.177;HRun=3;HaplotypeScore=52.3228;InbreedingCoeff=0.9952;MQ=82.17;MQ0=0;MQRankSum=0.257;QD=33.85;ReadPosRankSum=1.519;VQSLOD=5.2108;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.24:0,78,1098	1/1:0,7:7:21.07:260,21,0	0/0:14,0:14:34.79:0,35,510	0/0:17,0:17:44.77:0,45,575	0/0:19,0:19:51.17:0,51,727	1/1:0,20:20:57.18:706,57,0	1/1:1,23:24:60.19:744,60,0	1/1:0,13:13:39.10:469,39,0	0/0:14,0:14:39.08:0,39,537	1/1:1,12:13:35.99:410,36,0	1/1:0,16:16:48.15:590,48,0	0/0:10,0:10:30.10:0,30,432	0/0:7,0:7:15.01:0,15,193	1/1:0,11:11:27.08:335,27,0	1/1:0,15:15:42.13:522,42,0	1/1:0,14:14:36.11:446,36,0	1/1:2,38:40:99:1374,111,0	0/0:25,0:25:75.22:0,75,1045	0/0:23,0:23:64.99:0,65,867	0/0:10,0:10:30.03:0,30,388	0/0:27,0:27:78.26:0,78,1119	0/0:10,0:10:27.08:0,27,363	0/0:16,0:16:48.11:0,48,666	0/0:15,0:15:42.07:0,42,576	0/0:16,0:15:36.08:0,36,492	0/0:13,0:13:39.12:0,39,545	0/0:16,0:16:45.11:0,45,623	0/0:7,0:7:18.06:0,18,259
chr10	76562524	.	ATGTGTGTGTGTGTG	A	5052.87	PASS	AB=0.653;AC=16;AF=0.296;AN=54;BaseQRankSum=4.303;DP=494;FS=15.293;HRun=0;HaplotypeScore=177.5349;InbreedingCoeff=0.7076;MQ=52.40;MQ0=9;MQRankSum=-6.189;QD=33.03;ReadPosRankSum=4.064;VQSLOD=3.2376;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:27:6.44:0,6,61	0/0:3,0:7:8:0,8,239	./.	0/0:10,0:5:3.90:0,4,201	1/1:3,7:10:21.07:792,21,0	0/0:5,0:19:33.11:0,33,1996	0/0:16,0:29:24.08:0,24,1440	0/0:24,0:24:42.12:0,42,2352	0/0:7,0:9:15.05:0,15,957	0/0:8,0:17:42.14:0,42,2509	0/0:10,0:16:12.41:0,12,755	0/0:15,0:15:33.11:0,33,2109	0/0:10,0:10:18.06:0,18,1148	0/0:6,0:12:15.05:0,15,937	0/0:4,0:18:17.70:0,18,1102	0/0:9,0:18:17.09:0,17,886	0/0:17,0:37:54.10:0,54,2477	1/1:15,7:22:9.03:358,9,0	1/1:12,4:16:9.03:209,9,0	1/1:9,5:13:5.76:238,6,0	0/1:30,13:41:28.94:226,0,29	0/0:11,0:10:24.07:0,24,1380	0/0:7,0:7:12.01:0,12,454	0/0:40,0:41:87.19:0,87,5427	1/1:3,11:14:24.08:954,24,0	0/1:2,12:14:99:963,0,160	1/1:5,7:12:18.06:716,18,0	1/1:4,4:8:15.05:596,15,0
chr10	76564476	.	T	TA	337.26	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.552;DP=549;FS=0.000;HRun=10;HaplotypeScore=82.5117;InbreedingCoeff=0.5155;MQ=72.84;MQ0=1;MQRankSum=-1.697;QD=11.24;ReadPosRankSum=-1.926;VQSLOD=2.7938;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,23:28:1.82:413,2,0	0/0:9,0:9:14.96:0,15,123	0/0:15,0:12:5.29:0,5,52	0/0:22,0:19:4:0,4,128	0/0:20,0:20:35.92:0,36,295	0/0:20,0:20:26.95:0,27,222	0/0:29,1:30:30.84:0,31,454	0/0:27,0:27:56.91:0,57,463	0/0:18,0:19:37.98:0,38,301	0/0:18,0:18:32.92:0,33,271	1/1:2,0:2:0.47:1,0,0	0/0:30,0:30:62.84:0,63,510	0/0:13,0:13:26.95:0,27,222	0/0:14,0:14:35.92:0,36,291	0/0:28,0:28:62.89:0,63,517	0/0:19,0:19:7.64:0,8,210	0/0:33,0:33:68.79:0,69,555	0/0:22,0:23:27.46:0,27,350	0/0:22,0:22:50.91:0,51,415	0/0:18,0:18:41.91:0,42,342	0/0:32,0:31:62.09:0,62,505	0/0:11,0:11:20.97:0,21,172	0/0:12,0:12:17.22:0,17,144	0/0:26,1:27:27.89:0,28,436	0/0:11,0:11:8.90:0,9,68	0/0:15,0:15:22.21:0,22,298	0/0:17,1:18:15.90:0,16,329	0/0:11,0:11:17.95:0,18,148
chr10	76564497	.	A	ATGTGTG	161.89	PASS	AB=0.964;AC=7;AF=0.125;AN=56;BaseQRankSum=4.718;DP=544;FS=8.713;HRun=0;HaplotypeScore=135.6709;InbreedingCoeff=0.0541;MQ=58.66;MQ0=10;MQRankSum=-0.661;QD=1.64;ReadPosRankSum=-3.575;VQSLOD=0.7790;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:50.86:0,51,709	0/1:7,0:7:41.66:42,0,74	0/0:24,0:8:20.59:0,21,300	0/0:27,0:15:43.36:0,43,468	0/0:22,0:22:36.05:0,36,513	0/0:17,0:17:1.05:0,1,297	0/1:25,0:25:4.75:5,0,681	0/0:21,0:19:47.40:0,47,566	0/0:18,0:18:42.08:0,42,605	0/1:23,0:23:99:149,0,386	1/1:3,0:3:2.94:18,3,0	0/0:28,0:28:73.94:0,74,1199	0/0:15,0:15:33.03:0,33,492	0/0:14,0:14:3.98:0,4,237	0/1:18,2:23:36.12:36,0,564	0/1:18,0:18:33.96:34,0,363	0/0:24,0:24:7.33:0,7,571	0/0:26,0:25:57.03:0,57,748	0/0:23,0:22:59.90:0,60,807	0/0:17,0:16:37.81:0,38,517	0/0:31,0:30:56.98:0,57,863	0/0:7,0:7:15.03:0,15,208	0/0:9,0:9:21.01:0,21,291	0/0:35,0:35:74.70:0,75,1189	0/0:18,0:18:24.02:0,24,385	0/0:22,0:21:60.01:0,60,814	0/0:16,0:16:45.09:0,45,595	0/0:7,0:6:15.52:0,16,243
chr10	76564498	.	CGTGTGT	C	882.17	PASS	AB=0.881;AC=15;AF=0.288;AN=52;BaseQRankSum=3.137;DP=601;FS=12.415;HRun=0;HaplotypeScore=137.9187;InbreedingCoeff=0.3924;MQ=55.31;MQ0=10;MQRankSum=-5.163;QD=3.92;ReadPosRankSum=1.539;VQSLOD=1.9946;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:28:1.97:0,2,250	0/0:5,0:8:3.01:0,3,78	./.	./.	1/1:14,7:22:11.95:161,12,0	0/0:18,0:18:3.01:0,3,73	0/0:36,0:35:17.95:0,18,219	0/0:22,0:20:8.99:0,9,98	0/0:17,0:18:17.99:0,18,269	0/0:28,0:28:49.71:0,50,1008	0/0:9,0:9:12.04:0,12,257	0/1:28,0:28:10.40:10,0,911	0/0:12,1:15:20.20:0,20,333	0/0:18,0:17:11.85:0,12,183	0/0:26,0:26:18.06:0,18,383	0/0:20,0:20:18.52:0,19,371	0/0:27,0:27:19.18:0,19,251	0/1:21,7:28:6.26:204,0,6	0/1:22,0:21:14.98:15,0,31	1/1:13,3:15:5.98:81,6,0	0/1:43,0:43:2.24:2,0,16	0/0:7,0:7:12.01:0,12,183	0/0:10,0:10:5.55:0,6,167	0/0:36,0:36:42.60:0,43,1038	0/1:8,7:18:2.97:188,0,3	1/1:19,4:22:2.29:155,2,0	1/1:14,1:16:6.02:102,6,0	1/1:5,2:6:6.02:115,6,0
chr10	76565813	.	TTG	T	1977.69	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.854;DP=1397;DS;FS=5.753;HRun=0;HaplotypeScore=300.7411;InbreedingCoeff=0.9960;MQ=56.54;MQ0=7;MQRankSum=-2.350;QD=32.42;ReadPosRankSum=-1.670;VQSLOD=2.1232;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,54:61:99:2073,159,0	0/0:8,0:8:21.07:0,21,360	0/0:41,0:31:70.38:0,70,1042	0/0:61,0:43:54.59:0,55,1395	0/0:25,0:24:63.20:0,63,1080	0/0:28,0:28:66.22:0,66,1107	0/0:61,0:61:99:0,129,2155	0/0:42,0:42:99:0,102,1627	0/0:46,0:46:99:0,123,2079	0/0:62,0:62:99:0,166,2779	0/0:15,0:15:42.14:0,42,720	0/0:44,0:44:99:0,117,1986	0/0:31,0:31:87.30:0,87,1483	0/0:47,0:46:99:0,123,2093	0/0:59,0:59:99:0,163,2758	0/0:42,0:42:93.31:0,93,1594	0/0:42,0:42:99:0,108,1801	0/0:50,0:46:99:0,105,1950	0/0:44,0:44:93.31:0,93,1537	0/0:46,0:45:99:0,126,2126	0/0:248,0:247:99:0,530,8900	0/0:31,0:31:84.29:0,84,1440	0/0:23,0:24:66.23:0,66,1120	0/0:55,0:55:99:0,154,2596	0/0:35,0:34:90.31:0,90,1543	0/0:68,0:67:99:0,151,2555	0/0:46,0:46:99:0,111,1895	0/0:33,0:32:84.26:0,84,1386
chr10	76565845	.	T	TTG	15421.30	PASS	AB=0.768;AC=36;AF=0.643;AN=56;BaseQRankSum=1.804;DP=1364;DS;FS=0.946;HRun=0;HaplotypeScore=318.1310;InbreedingCoeff=0.6392;MQ=55.74;MQ0=15;MQRankSum=1.864;QD=15.66;ReadPosRankSum=2.059;VQSLOD=4.1621;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:67,0:67:78.13:0,78,896	1/1:5,8:13:27.09:424,27,0	0/0:66,0:32:0.46:0,0,266	0/1:68,0:39:20.67:21,0,293	1/1:10,11:20:27.06:367,27,0	1/1:12,18:30:25.05:861,25,0	0/1:31,24:54:23.83:1027,0,24	1/1:32,16:47:34.05:977,34,0	0/0:45,0:49:86.73:0,87,937	1/1:34,21:56:85.52:1270,86,0	1/1:11,5:16:12.14:274,12,0	0/0:42,0:45:89.90:0,90,998	0/0:28,0:30:71.82:0,72,760	0/1:29,24:52:59.33:988,0,59	1/1:35,27:62:22.98:1260,23,0	1/1:17,17:34:56.30:857,56,0	0/1:22,16:38:48.31:697,0,48	1/1:32,13:41:18.02:748,18,0	1/1:34,5:37:21.11:328,21,0	1/1:22,10:31:35.30:551,35,0	1/1:190,41:232:16.88:1851,17,0	0/0:34,0:34:48.11:0,48,539	0/0:26,0:26:54.13:0,54,619	0/0:62,0:62:99:0,135,1559	1/1:17,9:26:20.35:569,20,0	1/1:35,15:49:16.79:767,17,0	1/1:26,17:43:46.11:913,46,0	1/1:10,11:20:45.14:672,45,0
chr10	76565895	.	A	ATGCATGTGTGTAGTG	21258.12	PASS	AB=0.720;AC=32;AF=0.571;AN=56;BaseQRankSum=-2.484;DP=1206;DS;FS=12.665;HRun=0;HaplotypeScore=517.2023;InbreedingCoeff=0.5735;MQ=50.91;MQ0=2;MQRankSum=-10.858;QD=25.61;ReadPosRankSum=-6.399;VQSLOD=0.7282;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,27:57:3.42:134,3,0	1/1:6,5:12:3.01:49,3,0	0/0:43,0:39:68.31:0,68,1263	0/0:53,0:39:73.77:0,74,1801	0/1:6,11:21:0:0,0,0	1/1:11,17:33:15.02:742,15,0	1/1:36,0:68:36.97:1323,37,0	1/1:35,0:53:84.26:2808,84,0	0/0:47,0:47:99:0,120,4374	1/1:17,25:59:80.61:3429,81,0	0/0:3,13:20:0:0,0,0	0/0:52,0:52:99:0,123,4368	0/0:28,0:28:69.24:0,69,2636	1/1:20,27:54:24.07:881,24,0	1/1:18,35:66:19.55:891,20,0	0/1:15,27:51:99:1865,0,215	1/1:19,9:34:5.90:1162,6,0	0/1:18,2:24:99:1116,0,144	1/1:18,12:35:48.06:2386,48,0	0/0:10,13:24:2.22:0,2,7	0/1:135,3:148:99:869,0,240	0/0:32,0:32:72.20:0,72,2396	0/0:28,0:28:57.20:0,57,2070	0/0:48,0:48:99:0,123,4490	1/1:6,9:16:3.01:153,3,0	1/1:17,23:47:35.71:2825,36,0	1/1:21,10:35:1.12:394,1,0	1/1:4,0:12:6.02:231,6,0
chr10	76568803	.	CGTGTGT	C	4536.61	PASS	AB=0.884;AC=30;AF=0.600;AN=50;BaseQRankSum=5.649;DP=642;FS=17.036;HRun=0;HaplotypeScore=138.2343;InbreedingCoeff=0.8286;MQ=65.14;MQ0=19;MQRankSum=-8.287;QD=12.96;ReadPosRankSum=-0.858;VQSLOD=3.2034;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:46:43.96:0,44,505	1/1:7,2:9:6.02:117,6,0	./.	./.	0/0:13,0:24:15.71:0,16,424	1/1:10,7:17:12.04:239,12,0	1/1:15,7:23:24.08:461,24,0	0/1:20,0:17:0.11:0,0,0	0/0:18,0:18:30.10:0,30,828	1/1:20,4:24:5.74:107,6,0	1/1:12,7:18:5.45:78,5,0	0/0:28,0:28:57.65:0,58,1359	0/0:12,0:15:30.02:0,30,529	1/1:10,0:14:1.77:3,2,0	1/1:17,12:30:43.03:838,43,0	1/1:15,8:23:24.08:489,24,0	1/1:15,16:32:27.09:483,27,0	1/1:12,3:15:12.03:213,12,0	1/1:12,4:15:5.98:82,6,0	1/1:6,11:19:9.34:375,9,0	0/1:23,10:33:0:0,0,0	0/0:26,0:27:36.12:0,36,973	0/0:16,0:17:29.26:0,29,771	0/0:32,0:39:56.34:0,56,1507	0/0:10,0:19:21.07:0,21,540	1/1:18,10:29:33.52:519,34,0	1/1:8,13:23:27.09:531,27,0	./.
chr10	76569682	.	CCTCCTT	C	2131.99	PASS	AB=0.888;AC=14;AF=0.269;AN=52;BaseQRankSum=7.033;DP=825;FS=53.700;HRun=0;HaplotypeScore=113.2634;InbreedingCoeff=-0.3952;MQ=33.32;MQ0=214;MQRankSum=-7.395;QD=5.38;ReadPosRankSum=-0.662;VQSLOD=-0.2285;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,4:18:99:185,0,951	0/1:7,1:2:67.66:68,0,104	0/0:39,0:1:3.01:0,3,43	./.	0/0:20,2:11:21.07:0,21,766	0/1:18,2:18:25.60:26,0,1592	0/0:43,0:17:12.04:0,12,432	0/0:25,6:11:30.07:0,30,667	0/0:42,1:35:4.37:0,4,2392	0/0:27,0:13:39.13:0,39,1399	0/0:23,0:14:27.09:0,27,901	0/1:43,2:39:63.15:63,0,2270	0/1:30,2:22:19.76:20,0,1606	0/1:26,5:16:99:253,0,1053	0/1:18,8:19:99:406,0,579	0/1:24,4:17:99:317,0,1243	0/0:23,0:14:24.08:0,24,803	0/1:13,3:11:99:161,0,631	0/0:11,0:4:12.04:0,12,440	0/1:20,3:13:99:174,0,701	0/0:33,0:22:27.09:0,27,845	0/1:48,5:39:99:124,0,1993	0/0:35,4:27:22.05:0,22,681	0/0:46,0:42:78.22:0,78,2769	0/1:30,1:17:40.65:41,0,1046	0/1:24,5:19:99:341,0,1288	0/1:24,3:19:99:102,0,1356	./.
chr10	76569728	.	CCTCCTT	C	4780.10	PASS	AB=0.717;AC=39;AF=0.780;AN=50;BaseQRankSum=6.743;DP=453;FS=2.102;HRun=0;HaplotypeScore=63.5849;InbreedingCoeff=-0.1540;MQ=28.82;MQ0=112;MQRankSum=-4.229;QD=13.02;ReadPosRankSum=3.234;VQSLOD=2.6055;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,4:7:6.02:151,6,0	1/1:1,1:1:3.01:74,3,0	./.	./.	1/1:5,10:10:6.86:77,7,0	1/1:1,10:11:15.05:369,15,0	1/1:6,7:3:3.01:74,3,0	0/1:4,10:2:16.98:17,0,103	0/1:20,9:26:99:330,0,737	1/1:6,9:9:15.52:369,16,0	1/1:5,5:6:9.50:191,10,0	0/1:16,8:23:99:333,0,509	0/1:14,4:15:99:198,0,384	1/1:10,5:9:9.03:186,9,0	1/1:5,14:14:12.04:292,12,0	1/1:6,9:13:6.02:148,6,0	0/1:6,4:7:99:135,0,164	0/1:4,4:5:67.78:68,0,104	./.	1/1:6,2:3:6.02:132,6,0	0/1:8,4:7:45.67:46,0,101	0/1:24,16:31:99:473,0,155	0/1:17,14:24:97.93:137,0,98	0/0:21,3:22:27.02:0,27,765	1/1:9,7:8:3.01:74,3,0	1/1:8,6:11:18.03:391,18,0	1/1:4,9:10:12.04:295,12,0	1/1:0,4:3:9.03:221,9,0
chr10	76583863	.	CTTG	C	1853.24	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.985;DP=740;FS=2.921;HRun=0;HaplotypeScore=98.8287;InbreedingCoeff=0.9999;MQ=69.01;MQ0=0;MQRankSum=-4.305;QD=39.43;ReadPosRankSum=3.927;VQSLOD=4.7478;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,46:47:99:1948,117,0	0/0:14,0:14:39.12:0,39,840	0/0:28,0:27:72.24:0,72,1485	0/0:19,0:19:57.20:0,57,1287	0/0:20,0:20:60.19:0,60,1268	0/0:19,0:19:57.20:0,57,1273	0/0:23,0:23:69.22:0,69,1478	0/0:33,0:33:96.32:0,96,2111	0/0:30,0:30:78.27:0,78,1767	0/0:26,0:26:69.24:0,69,1508	0/0:19,0:19:54.19:0,54,1208	0/0:28,0:28:84.29:0,84,1880	0/0:29,0:29:87.30:0,87,1920	0/0:23,0:23:69.24:0,69,1530	0/0:34,0:34:96.31:0,96,2086	0/0:23,0:23:63.22:0,63,1410	0/0:25,0:25:75.26:0,75,1700	0/0:33,0:33:93.32:0,93,2083	0/0:27,0:27:72.25:0,72,1589	0/0:24,0:24:66.23:0,66,1461	0/0:45,0:45:99:0,132,2972	0/0:25,0:25:75.26:0,75,1656	0/0:24,0:24:72.25:0,72,1616	0/0:32,0:32:90.31:0,90,2039	0/0:24,0:24:72.23:0,72,1568	0/0:29,0:29:84.29:0,84,1866	0/0:24,0:24:69.24:0,69,1563	0/0:13,0:13:39.11:0,39,839
chr10	76584977	.	A	AC	709.92	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-4.862;DP=495;FS=0.920;HRun=6;HaplotypeScore=60.9759;InbreedingCoeff=0.8437;MQ=77.24;MQ0=0;MQRankSum=1.863;QD=18.20;ReadPosRankSum=-0.577;VQSLOD=3.1516;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:96.20:0,96,978	0/0:8,0:8:24.05:0,24,245	0/1:10,0:10:0.97:1,0,51	0/0:11,0:13:21.65:0,22,188	1/1:1,10:11:24.08:302,24,0	0/0:17,0:17:45.10:0,45,459	0/0:17,0:17:45.09:0,45,452	0/0:7,0:7:15.03:0,15,153	0/0:18,0:18:44.69:0,45,458	0/0:9,0:9:27.06:0,27,275	0/0:10,0:10:27.06:0,27,274	0/0:21,0:21:57.13:0,57,581	0/0:21,0:21:57.12:0,57,581	0/0:10,0:10:30.05:0,30,299	0/0:21,0:21:54.10:0,54,542	0/0:16,0:16:45.10:0,45,459	0/0:42,0:42:99:0,114,1162	0/0:24,0:24:66.15:0,66,673	0/0:12,0:12:30.07:0,30,306	0/0:18,0:18:45.09:0,45,452	0/0:33,0:33:81.18:0,81,826	0/0:17,0:17:42.09:0,42,427	0/0:18,0:18:39.07:0,39,389	0/0:31,0:31:69.15:0,69,704	1/1:0,18:18:42.13:528,42,0	0/0:10,0:10:27.06:0,27,275	0/0:15,0:15:45.10:0,45,458	0/0:6,0:6:12.02:0,12,122
chr10	76585058	.	G	GA	68.93	PASS	AB=0.803;AC=6;AF=0.107;AN=56;BaseQRankSum=4.036;DP=213;FS=63.266;HRun=0;HaplotypeScore=35.8540;InbreedingCoeff=-0.1662;MQ=75.80;MQ0=0;MQRankSum=-2.823;QD=2.15;ReadPosRankSum=0.130;VQSLOD=0.1241;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,1:20:18.27:0,18,378	0/0:3,0:3:9.02:0,9,110	0/0:7,0:7:21.06:0,21,256	0/0:9,0:9:13.92:0,14,174	0/0:8,1:9:8.88:0,9,107	0/1:5,1:6:28.42:28,0,151	0/0:10,0:10:24.03:0,24,296	0/0:2,0:2:6:0,6,53	0/0:9,0:9:17.97:0,18,165	0/0:8,0:7:21.07:0,21,289	0/0:4,0:4:2.96:0,3,27	0/1:5,1:6:27.95:28,0,151	0/0:1,0:1:3:0,3,25	0/0:5,0:5:2.79:0,3,42	0/0:7,0:7:3.01:0,3,42	0/1:3,1:4:34.10:34,0,72	0/0:22,0:22:42.06:0,42,512	0/0:6,0:6:18.06:0,18,250	0/0:6,0:6:18.06:0,18,250	0/1:4,2:6:34.07:34,0,74	0/0:7,0:7:12.03:0,12,151	0/0:10,1:11:17.95:0,18,204	0/0:8,1:9:20.87:0,21,213	0/0:11,0:11:14.97:0,15,151	0/1:7,1:8:27.63:28,0,129	0/0:8,0:8:24.06:0,24,301	0/0:7,0:7:18.06:0,18,247	0/1:1,1:2:35.60:39,0,36
chr10	76585729	.	T	TTG	9342.21	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-10.231;DP=547;FS=31.458;HRun=0;HaplotypeScore=70.5104;InbreedingCoeff=0.9456;MQ=60.56;MQ0=8;MQRankSum=-0.347;QD=25.46;ReadPosRankSum=0.291;VQSLOD=2.7553;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:81.25:0,81,997	1/1:0,3:3:9.03:147,9,0	0/0:27,0:16:30.09:0,30,361	0/0:17,0:5:9.02:0,9,102	0/0:16,0:16:39.12:0,39,479	1/1:4,17:21:4.70:369,5,0	1/1:4,15:19:24.08:391,24,0	1/1:16,25:42:76.33:1156,76,0	0/0:10,0:10:24.08:0,24,295	1/1:5,17:22:54.16:849,54,0	1/1:3,13:16:21.07:341,21,0	0/0:14,0:14:27.08:0,27,332	0/0:9,0:8:15.05:0,15,185	1/1:1,8:10:15.05:245,15,0	1/1:2,10:12:12.04:196,12,0	1/1:2,7:9:15.05:244,15,0	1/1:10,36:46:69.24:1115,69,0	1/1:7,28:35:45.02:733,45,0	1/1:7,16:23:14.11:644,14,0	1/1:5,19:24:39.13:614,39,0	1/1:8,22:31:51.17:801,51,0	0/0:8,0:8:24.08:0,24,295	0/0:8,0:8:21.07:0,21,258	0/0:14,0:14:33.10:0,33,406	0/0:17,0:17:45.13:0,45,542	1/1:6,21:27:60.19:939,60,0	1/1:3,10:14:15.05:245,15,0	1/1:3,10:13:21.03:314,21,0
chr10	76586948	.	C	CCCA	317.81	PASS	AB=0.925;AC=20;AF=0.455;AN=44;BaseQRankSum=-1.254;DP=125;FS=33.102;HRun=0;HaplotypeScore=35.9887;InbreedingCoeff=0.1683;MQ=99.03;MQ0=6;MQRankSum=-0.598;QD=6.36;ReadPosRankSum=1.582;VQSLOD=1.0085;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,0:2:2.04:6,2,0	0/0:26,0:13:23.01:0,23,217	0/0:26,0:13:5.67:0,6,138	./.	0/1:3,0:3:10.25:11,0,10	1/1:5,0:4:2.17:16,2,0	0/1:3,2:5:15.60:74,0,16	0/0:2,0:2:5.97:0,6,45	1/1:6,0:6:2.36:52,2,0	./.	0/0:3,0:3:3:0,3,25	./.	0/0:2,0:2:5.80:0,6,31	1/1:1,0:1:2.84:14,3,0	./.	1/1:2,1:4:5.99:109,6,0	0/1:8,0:8:25.49:42,0,25	1/1:2,0:2:3.01:54,3,0	0/0:1,0:1:0.47:0,0,1	0/1:4,1:5:8.74:51,0,9	0/0:4,0:4:5.90:0,6,43	0/1:2,0:2:0:0,0,0	0/0:4,0:4:2.73:0,3,24	./.	0/0:3,0:3:0:0,0,0	0/1:6,0:6:2.17:2,0,40	1/1:1,0:1:2.50:9,2,0
chr10	76587369	.	T	TTTTC	2029.42	PASS	AB=1.000;AC=47;AF=0.940;AN=50;BaseQRankSum=-0.735;DP=456;FS=0.000;HRun=0;HaplotypeScore=93.3444;InbreedingCoeff=0.1697;MQ=68.07;MQ0=6;MQRankSum=0.530;QD=5.35;ReadPosRankSum=-0.783;VQSLOD=1.9422;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:4.25:29,4,0	1/1:7,0:6:3:27,3,0	./.	./.	1/1:13,0:11:17.85:131,18,0	1/1:19,0:19:23.75:199,24,0	1/1:23,0:23:18.44:165,18,0	./.	1/1:10,3:14:3.01:69,3,0	1/1:22,0:21:5.91:81,6,0	1/1:7,0:7:5.66:29,6,0	1/1:20,0:20:9.03:168,9,0	0/1:13,0:13:6.89:183,0,7	1/1:8,0:8:5.93:45,6,0	1/1:16,0:16:17.86:139,18,0	1/1:19,0:17:12.83:62,13,0	1/1:14,0:14:8.96:71,9,0	1/1:20,0:20:8.73:61,9,0	1/1:18,0:16:8.99:76,9,0	1/1:16,0:16:8.84:62,9,0	1/1:14,0:14:9.43:70,9,0	1/1:14,0:14:0.98:71,1,0	1/1:15,0:14:14.96:160,15,0	1/1:13,0:13:2.99:26,3,0	0/0:17,0:17:8.92:0,9,76	1/1:21,0:21:11.51:121,12,0	1/1:17,0:17:2.86:36,3,0	1/1:15,0:15:6.88:50,7,0
chr10	76587423	.	TTCTCTCTCTCTCTC	T	2774.42	PASS	AB=0.978;AC=20;AF=0.357;AN=56;BaseQRankSum=-5.749;DP=382;FS=4.466;HRun=0;HaplotypeScore=165.6782;InbreedingCoeff=-0.5650;MQ=41.51;MQ0=15;MQRankSum=-1.364;QD=10.75;ReadPosRankSum=-2.503;VQSLOD=2.3076;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:9:99:117,0,263	0/1:7,0:5:17.79:18,0,294	0/0:15,0:3:5.94:0,6,185	0/0:13,0:2:6.02:0,6,162	0/1:13,0:12:15.52:220,0,16	0/1:21,0:21:99:301,0,682	0/1:17,0:15:99:162,0,231	0/0:40,0:35:95.20:0,95,1758	0/0:8,0:8:15.05:0,15,688	0/1:20,0:18:99:218,0,653	0/1:7,0:7:91.46:136,0,91	0/0:9,0:9:24.08:0,24,943	0/0:10,0:10:30.10:0,30,1028	0/1:9,0:9:88.60:89,0,542	0/1:15,0:15:99:169,0,828	0/1:14,0:12:99:269,0,241	0/1:16,0:16:99:352,0,611	0/1:19,0:18:99:152,0,1071	0/1:15,4:15:57.82:58,0,907	0/1:11,0:10:99:115,0,291	0/1:12,0:12:99:130,0,298	0/0:10,0:10:3.11:0,3,1002	0/1:10,0:9:89.45:89,0,394	0/1:10,0:10:5.22:5,0,627	0/0:19,0:19:39.11:0,39,1141	0/1:9,5:14:99:183,0,653	0/1:9,0:9:36.27:36,0,538	0/1:5,0:5:9.79:112,0,10
chr10	76587470	.	CT	C	190.90	PASS	AB=0.857;AC=3;AF=0.054;AN=56;BaseQRankSum=1.767;DP=427;FS=9.424;HRun=12;HaplotypeScore=83.9329;InbreedingCoeff=0.4276;MQ=62.77;MQ0=8;MQRankSum=1.118;QD=7.64;ReadPosRankSum=0.743;VQSLOD=1.9873;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:10:14.20:0,14,72	0/0:7,0:6:18.04:0,18,183	0/0:46,0:21:22.62:0,23,243	0/0:49,0:14:5.55:0,6,41	1/1:1,12:13:35.85:278,36,0	0/0:17,1:18:12.75:0,13,281	0/0:6,0:6:15.03:0,15,152	0/0:17,0:19:29.88:0,30,282	0/0:6,0:7:20.96:0,21,194	0/0:12,0:12:18.03:0,18,177	0/1:10,2:12:16.23:16,0,213	0/0:17,1:18:7.76:0,8,291	0/0:13,0:14:23.85:0,24,210	0/0:13,0:13:26.67:0,27,224	0/0:18,0:18:36.03:0,36,351	0/0:5,0:6:11.89:0,12,98	0/0:16,0:17:35.91:0,36,349	0/0:18,4:23:1.49:0,1,349	0/0:18,0:16:35.98:0,36,340	0/0:14,0:15:32.80:0,33,287	0/0:5,0:5:3.01:0,3,30	0/0:13,0:14:9.84:0,10,265	0/0:9,0:9:15.02:0,15,147	0/0:14,0:14:36.07:0,36,361	0/0:4,1:5:0:0,0,0	0/0:16,0:16:33.06:0,33,330	0/0:13,0:13:34.61:0,35,332	0/0:3,0:4:11.86:0,12,106
chr10	76589633	.	A	AAAAT	531	PASS	AB=0.900;AC=3;AF=0.063;AN=48;BaseQRankSum=-3.245;DP=274;FS=1.237;HRun=0;HaplotypeScore=47.6335;InbreedingCoeff=0.2443;MQ=67.36;MQ0=1;MQRankSum=0.519;QD=20.42;ReadPosRankSum=0.293;VQSLOD=3.1747;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:33.11:0,33,524	0/0:4,0:4:6.02:0,6,96	./.	0/0:11,0:5:0.61:0,1,20	0/0:10,0:15:15.02:0,15,140	0/0:18,0:18:33.10:0,33,505	0/0:1,0:1:3.01:0,3,48	0/0:39,0:39:36.11:0,36,552	0/0:4,0:4:6.01:0,6,73	0/0:7,0:7:6.02:0,6,96	0/0:5,0:5:6.02:0,6,96	0/0:3,0:3:3.01:0,3,48	0/0:7,0:7:18.06:0,18,288	0/0:5,0:5:6.02:0,6,96	0/0:6,0:6:12.03:0,12,169	./.	0/0:29,0:28:69.24:0,69,1097	1/1:6,10:17:24.08:575,24,0	0/0:15,0:13:12.04:0,12,191	0/0:9,0:9:9.03:0,9,144	./.	./.	0/0:3,0:3:3.01:0,3,48	0/0:5,0:5:9.03:0,9,144	0/0:7,0:14:18.02:0,18,168	0/0:8,0:8:15.05:0,15,238	0/1:8,1:9:56.64:57,0,177	0/0:14,0:14:15.05:0,15,240
chr10	76589966	.	G	GTGTGTGTGTGTCTGTC	10992.41	PASS	AB=0.776;AC=38;AF=0.679;AN=56;BaseQRankSum=-2.306;DP=754;FS=0.380;HRun=0;HaplotypeScore=234.8812;InbreedingCoeff=0.7513;MQ=48.97;MQ0=20;MQRankSum=-2.199;QD=21.06;ReadPosRankSum=-4.382;VQSLOD=2.8982;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:63:27.15:110,0,27	0/1:9,0:9:13.36:302,0,13	0/0:31,0:6:9:0,9,104	0/0:31,0:9:27.01:0,27,395	1/1:23,0:23:35.77:500,36,0	1/1:5,0:22:12.04:412,12,0	1/1:43,0:42:71.17:1144,71,0	1/1:34,0:33:78.45:1011,78,0	0/0:28,0:27:15.02:0,15,1711	1/1:19,0:19:51.10:851,51,0	1/1:11,0:11:18.02:224,18,0	0/0:34,0:34:90.13:0,90,2337	0/0:20,0:20:30.84:0,31,1090	1/1:26,0:25:35.41:528,35,0	1/1:4,0:33:3.90:148,4,0	1/1:5,1:21:13.39:691,13,0	1/1:6,12:26:7.74:245,8,0	1/1:22,0:22:3.04:549,3,0	1/1:22,0:20:49.58:842,50,0	1/1:17,0:17:35.98:516,36,0	1/1:46,0:43:54.99:848,55,0	0/0:19,0:19:31.31:0,31,1073	0/0:14,0:14:22.67:0,23,569	0/0:55,0:55:99:0,134,3771	1/1:20,0:20:33.54:509,34,0	1/1:34,0:28:25.73:973,26,0	1/1:2,10:16:9.02:230,9,0	1/1:11,0:9:27.04:360,27,0
chr10	76591118	.	A	AGTGTGTGTGTGTGTGTGTGTGT	16436.43	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=1.475;DP=694;FS=0.462;HRun=0;HaplotypeScore=358.2735;InbreedingCoeff=0.8494;MQ=57.71;MQ0=3;MQRankSum=-10.318;QD=35.73;ReadPosRankSum=-4.495;VQSLOD=2.1695;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:48:9.56:833,10,0	1/1:14,0:13:15.03:1093,15,0	0/0:27,0:21:29.47:0,29,545	0/0:32,0:24:31.05:0,31,1077	1/1:20,0:19:2.21:24,2,0	1/1:27,0:26:21.02:668,21,0	1/1:21,0:21:9.02:479,9,0	1/1:19,0:18:15.05:837,15,0	0/0:28,0:36:78.23:0,78,3676	1/1:30,0:30:57.01:2391,57,0	1/1:17,0:17:6:329,6,0	0/0:27,0:30:57.19:0,57,2939	0/0:34,0:34:54.18:0,54,2831	1/1:25,0:25:11.13:456,11,0	1/1:16,11:27:12.47:932,12,0	1/1:11,0:21:5.60:406,6,0	1/1:24,0:24:23.93:1129,24,0	1/1:11,0:11:9:495,9,0	1/1:21,0:21:26.67:1022,27,0	1/1:11,11:22:6.02:610,6,0	1/1:26,0:24:8.19:154,8,0	0/0:24,0:26:64.71:0,65,2834	0/0:17,0:18:45.09:0,45,1757	0/0:31,0:31:66.21:0,66,3257	1/1:14,0:14:9.03:469,9,0	1/1:24,15:38:43.49:2936,43,0	1/1:17,0:16:21.02:1044,21,0	1/1:14,0:13:11.64:130,12,0
chr10	76591966	.	T	TAA	888.74	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.476;DP=408;FS=5.530;HRun=9;HaplotypeScore=57.6354;InbreedingCoeff=0.8485;MQ=71.40;MQ0=0;MQRankSum=0.376;QD=16.16;ReadPosRankSum=0.270;VQSLOD=1.2984;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:37:65.63:926,66,0	0/0:7,0:7:15.01:0,15,151	0/0:11,0:9:11.91:0,12,112	0/0:10,0:10:1.32:0,1,128	1/1:2,0:8:7.96:37,8,0	0/0:16,0:16:42.02:0,42,431	0/0:13,0:13:39.05:0,39,401	0/0:24,0:24:48.04:0,48,510	0/0:8,0:8:21.04:0,21,223	0/0:22,0:22:57.13:0,57,605	0/0:11,0:11:15:0,15,151	0/0:9,0:9:24.04:0,24,248	0/0:6,0:6:15.02:0,15,160	0/0:5,0:5:15.04:0,15,159	0/0:18,0:18:51.12:0,51,538	0/0:9,0:9:24.01:0,24,242	0/0:27,0:27:69.15:0,69,733	0/0:12,0:12:36.09:0,36,383	0/0:25,0:25:63.11:0,63,650	0/0:19,0:19:45.06:0,45,469	0/0:14,0:14:10.09:0,10,306	0/0:9,0:9:27.07:0,27,285	0/0:9,0:9:21.05:0,21,223	0/0:16,0:16:36.07:0,36,383	1/1:1,0:10:17.47:60,17,0	0/0:19,0:19:39.06:0,39,411	0/0:17,0:16:42.07:0,42,447	0/0:17,0:17:48.11:0,48,510
chr10	76592379	.	C	CA	2304.40	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-3.874;DP=304;FS=3.706;HRun=0;HaplotypeScore=39.6159;InbreedingCoeff=0.7333;MQ=59.70;MQ0=15;MQRankSum=-3.552;QD=11.30;ReadPosRankSum=2.033;VQSLOD=3.2231;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:3.01:36,3,0	1/1:2,0:1:2.94:18,3,0	0/1:31,0:6:1.39:1,0,119	0/0:35,0:14:5.35:0,5,147	1/1:7,0:7:11.79:75,12,0	1/1:7,0:7:20.78:148,21,0	1/1:0,13:13:3.01:34,3,0	1/1:1,8:8:23.84:194,24,0	0/0:14,0:14:29.24:0,29,262	1/1:1,8:9:17.82:176,18,0	1/1:1,5:5:6.01:70,6,0	0/0:12,0:12:25.18:0,25,241	0/0:11,0:11:29.13:0,29,376	1/1:11,0:11:28.55:180,29,0	1/1:9,0:9:26.43:158,26,0	1/1:0,6:6:3.48:45,3,0	1/1:14,0:14:41.49:319,41,0	1/1:7,0:7:20.73:137,21,0	1/1:10,0:8:23.83:179,24,0	1/1:1,6:6:3.01:34,3,0	1/1:11,0:11:23.46:144,23,0	0/0:7,0:7:21.01:0,21,257	0/0:6,0:6:11.05:0,11,126	0/0:15,0:14:21.93:0,22,221	1/1:13,0:13:35.30:215,35,0	1/1:10,0:10:26.66:179,27,0	1/1:7,0:7:17.83:134,18,0	1/1:1,0:1:2.94:18,3,0
chr10	76592627	.	A	ACCC	19073.01	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=15.314;DP=595;FS=5.732;HRun=0;HaplotypeScore=101.6893;InbreedingCoeff=0.9889;MQ=92.03;MQ0=0;MQRankSum=-6.883;QD=58.87;ReadPosRankSum=3.177;VQSLOD=7.0255;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,2184	1/1:1,5:6:15.01:270,15,0	0/0:28,0:28:79.12:0,79,1324	0/0:26,0:26:75.26:0,75,1331	0/0:17,0:17:51.05:0,51,874	1/1:0,13:13:36.03:745,36,0	1/1:4,25:30:75.25:1637,75,0	1/1:2,11:14:38.87:808,39,0	0/0:22,0:22:66.23:0,66,1224	1/1:0,31:33:93.28:1999,93,0	1/1:0,15:15:39.09:863,39,0	0/0:28,0:28:81.26:0,81,1472	0/0:23,0:23:66.23:0,66,1208	1/1:0,27:28:78.27:1812,78,0	1/1:1,13:14:39.13:881,39,0	1/1:0,17:17:48.16:1098,48,0	1/1:1,29:31:75.26:1771,75,0	1/1:1,21:23:54.18:1238,54,0	1/1:0,8:10:27.08:546,27,0	1/1:0,8:9:24.08:495,24,0	1/1:1,45:46:99:2868,126,0	0/0:15,0:15:45.15:0,45,812	0/0:13,0:13:39.13:0,39,716	0/0:40,0:40:99:0,117,2138	0/0:17,0:17:51.17:0,51,938	1/1:1,9:11:33.10:644,33,0	1/1:0,17:19:51.18:1187,51,0	1/1:0,5:5:9.03:212,9,0
chr10	76593174	.	G	GAC	18353.17	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=11.825;DP=744;FS=5.930;HRun=0;HaplotypeScore=110.1383;InbreedingCoeff=0.9999;MQ=76.41;MQ0=1;MQRankSum=-3.750;QD=32.89;ReadPosRankSum=2.556;VQSLOD=7.2261;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,51:54:99:2468,135,0	1/1:15,1:16:42.13:529,42,0	0/0:23,0:23:60.19:0,60,829	0/0:19,0:19:51.17:0,51,728	1/1:34,0:34:96.29:1178,96,0	1/1:23,0:23:57.17:688,57,0	1/1:33,0:33:69.20:816,69,0	1/1:33,0:33:90.22:1058,90,0	0/0:21,0:21:63.21:0,63,903	1/1:30,0:30:87.23:983,87,0	1/1:24,0:24:69.20:812,69,0	0/0:19,0:19:57.16:0,57,778	0/0:24,0:24:69.22:0,69,971	1/1:26,0:26:66.05:797,66,0	1/1:38,0:38:99:1159,99,0	1/1:19,0:19:54.16:644,54,0	1/1:30,0:30:84.25:977,84,0	1/1:27,0:27:78.22:900,78,0	1/1:35,0:35:90.22:1016,90,0	1/1:24,0:24:63.18:722,63,0	1/1:41,0:41:99:1391,117,0	0/0:25,0:25:72.24:0,72,1027	0/0:24,0:24:72.23:0,72,1010	0/0:31,0:31:90.30:0,90,1285	1/1:17,0:17:39.11:458,39,0	1/1:17,0:17:51.14:593,51,0	1/1:24,0:24:66.20:807,66,0	1/1:12,0:12:30.98:357,31,0
chr10	76593175	.	A	ACG	27617.16	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-13.525;DP=757;FS=5.248;HRun=0;HaplotypeScore=79.5119;InbreedingCoeff=0.9999;MQ=76.03;MQ0=1;MQRankSum=-6.911;QD=48.20;ReadPosRankSum=2.738;VQSLOD=6.0706;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:55,0:54:99:1367,113,0	1/1:2,14:16:42.14:790,42,0	0/0:23,0:23:66.16:0,66,941	0/0:19,0:19:54.18:0,54,811	1/1:1,35:38:96.33:1851,96,0	1/1:0,22:22:57.20:1098,57,0	1/1:0,32:32:69.24:1330,69,0	1/1:6,28:34:99:1876,99,0	0/0:21,0:21:63.21:0,63,965	1/1:0,29:30:87.30:1679,87,0	1/1:0,24:24:69.24:1331,69,0	0/0:19,0:19:57.19:0,57,867	0/0:24,0:24:69.23:0,69,1054	1/1:2,25:27:66.08:1272,66,0	1/1:3,35:38:99:1911,99,0	1/1:1,18:19:54.19:1042,54,0	1/1:1,30:31:87.30:1674,87,0	1/1:0,28:28:78.27:1506,78,0	1/1:5,31:37:93.32:1774,93,0	1/1:2,23:25:63.22:1216,63,0	1/1:1,41:43:99:2258,117,0	0/0:24,0:24:72.24:0,72,1099	0/0:24,0:24:72.24:0,72,1100	0/0:30,0:30:90.31:0,90,1378	1/1:1,16:17:39.13:753,39,0	1/1:0,17:17:51.17:984,51,0	1/1:4,23:28:69.24:1325,69,0	1/1:0,12:12:30.99:580,31,0
chr10	76595425	.	GTA	G	15792.33	PASS	AB=0.767;AC=20;AF=0.357;AN=56;BaseQRankSum=18.686;DP=2658;FS=1.780;HRun=0;HaplotypeScore=580.8229;InbreedingCoeff=-0.5556;MQ=53.44;MQ0=54;MQRankSum=0.494;QD=8.79;ReadPosRankSum=1.331;VQSLOD=3.6396;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:92,23:110:99:676,0,3760	0/1:25,7:32:99:163,0,1182	0/0:119,0:66:99:0,173,2894	0/0:126,0:62:99:0,158,2817	0/1:34,35:69:99:988,0,1576	0/1:37,18:53:99:555,0,1453	0/1:54,15:64:99:568,0,1933	0/1:118,19:120:99:675,0,4301	0/0:131,0:121:99:0,319,5854	0/1:127,45:149:99:1736,0,4455	0/1:48,17:65:99:538,0,2098	0/0:109,0:107:99:0,265,5011	0/0:96,0:88:99:0,214,3976	0/1:70,26:92:99:521,0,3039	0/1:94,39:123:99:1118,0,3567	0/1:74,29:95:99:672,0,2968	0/1:36,19:51:99:560,0,1286	0/1:41,30:71:99:780,0,2019	0/1:57,12:57:99:399,0,1892	0/1:73,36:109:99:881,0,3000	0/1:120,51:163:99:1891,0,4590	0/0:95,0:92:99:0,235,4423	0/0:85,0:83:99:0,202,3683	0/0:101,0:95:99:0,237,4369	0/1:29,24:53:99:598,0,1495	0/1:62,42:97:99:1160,0,2893	0/1:44,24:64:99:618,0,1865	0/1:26,24:49:99:694,0,1155
chr10	76595547	.	ATG	A	16898.05	PASS	AB=0.786;AC=20;AF=0.357;AN=56;BaseQRankSum=4.640;DP=3265;FS=28.151;HRun=0;HaplotypeScore=787.0315;InbreedingCoeff=-0.5556;MQ=47.66;MQ0=20;MQRankSum=1.770;QD=7.58;ReadPosRankSum=0.059;VQSLOD=1.3689;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:99,37:130:99:1077,0,2778	0/1:36,10:46:99:271,0,1454	0/0:102,0:75:99:0,153,2339	0/0:104,0:80:99:0,160,2513	0/1:48,22:70:99:655,0,1034	0/1:59,24:80:99:682,0,1658	0/1:66,25:78:99:404,0,1573	0/1:122,27:122:99:892,0,2812	0/0:126,0:171:99:0,342,4951	0/1:158,58:202:99:1527,0,4983	0/1:65,26:91:99:736,0,2237	0/0:111,0:142:99:0,278,4047	0/0:105,0:130:99:0,265,3659	0/1:76,39:109:99:916,0,2063	0/1:103,56:158:99:1450,0,2736	0/1:106,54:152:99:1503,0,3115	0/1:73,15:85:99:438,0,2193	0/1:49,11:60:99:337,0,1708	0/1:46,22:65:99:615,0,1465	0/1:97,26:122:99:782,0,3410	0/1:176,44:213:99:1338,0,5536	0/0:101,0:127:99:0,275,3995	0/0:71,0:95:99:0,187,2844	0/0:89,0:113:99:0,222,3433	0/1:37,21:58:99:668,0,827	0/1:106,41:142:99:1212,0,3571	0/1:60,24:79:99:747,0,1807	0/1:32,20:53:99:650,0,1120
chr10	76595597	.	C	CTG	18931.37	PASS	AB=0.787;AC=26;AF=0.464;AN=56;BaseQRankSum=-9.846;DP=2314;FS=308.181;HRun=0;HaplotypeScore=730.8594;InbreedingCoeff=-0.8653;MQ=44.06;MQ0=28;MQRankSum=-2.392;QD=8.72;ReadPosRankSum=-2.428;VQSLOD=-0.1628;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:56,29:81:99:922,0,1095	0/1:29,7:36:99:497,0,582	0/0:68,0:30:18.59:0,19,914	0/0:75,0:33:78.07:0,78,1032	0/1:52,12:63:65.88:66,0,912	0/1:36,21:53:99:670,0,641	0/1:51,16:52:99:168,0,1003	0/1:82,18:70:99:316,0,1728	0/1:92,42:124:99:1015,0,2084	0/1:128,50:160:99:2039,0,2632	0/1:54,14:66:99:667,0,1012	0/1:70,26:90:99:607,0,1331	0/1:68,35:88:99:791,0,1380	0/1:46,36:75:99:1182,0,688	0/1:85,39:113:99:868,0,1623	0/1:79,38:106:99:1087,0,1950	0/1:31,19:47:99:561,0,827	0/1:25,16:40:99:698,0,573	0/1:38,13:39:99:193,0,741	0/1:69,22:90:99:1196,0,1452	0/1:104,36:128:99:947,0,1815	0/1:67,22:88:99:726,0,1359	0/1:55,14:66:99:616,0,1198	0/1:53,22:70:99:718,0,1001	0/1:39,2:41:14.33:14,0,1016	0/1:78,26:97:99:1038,0,1670	0/1:55,16:68:99:634,0,1460	0/1:22,15:36:99:696,0,458
chr10	76595629	.	GTA	G	16480.21	PASS	AB=0.812;AC=29;AF=0.518;AN=56;BaseQRankSum=-9.892;DP=1546;FS=213.847;HRun=0;HaplotypeScore=587.9259;InbreedingCoeff=-0.9495;MQ=35.60;MQ0=48;MQRankSum=7.046;QD=10.66;ReadPosRankSum=-6.667;VQSLOD=0.5223;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:50,1:48:99:144,0,473	0/1:18,2:20:99:161,0,203	0/1:42,6:11:51.01:231,0,51	0/1:43,3:13:60.23:60,0,169	0/1:46,0:45:99:113,0,293	0/1:25,12:33:99:332,0,507	1/1:21,12:22:4.22:546,4,0	0/1:59,17:56:99:505,0,852	0/1:55,31:77:99:1208,0,592	0/1:100,28:120:99:1231,0,1521	0/1:28,11:37:99:375,0,332	0/1:40,19:54:99:578,0,140	0/1:42,23:54:99:875,0,534	0/1:33,16:46:99:574,0,442	0/1:49,36:75:99:1309,0,688	0/1:58,26:77:99:1115,0,670	0/1:18,9:26:99:381,0,168	0/1:25,2:27:99:181,0,232	0/1:29,3:25:80.98:81,0,561	0/1:52,17:68:99:749,0,449	0/1:53,24:69:99:649,0,204	0/1:48,23:70:99:1100,0,451	0/1:40,14:53:86.50:825,0,87	0/1:17,22:36:34.51:540,0,35	0/1:40,0:40:99:152,0,553	0/1:53,26:74:99:1298,0,1009	0/1:37,17:53:99:767,0,419	0/1:13,8:21:99:399,0,139
chr10	76595631	.	ATG	A	7486.36	PASS	AB=0.977;AC=29;AF=0.518;AN=56;BaseQRankSum=-7.680;DP=1466;FS=224.019;HRun=0;HaplotypeScore=588.8609;InbreedingCoeff=-0.9433;MQ=35.05;MQ0=47;MQRankSum=7.905;QD=5.11;ReadPosRankSum=-5.978;VQSLOD=-0.3595;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:46,0:43:23.20:23,0,401	0/1:18,0:18:58.36:58,0,175	0/1:47,0:10:16.75:91,0,17	0/1:46,0:12:11.34:11,0,78	0/1:44,1:44:10.31:10,0,282	0/1:35,0:31:99:141,0,467	1/1:29,0:19:1.22:245,1,0	0/1:62,6:47:99:243,0,752	0/1:82,0:73:99:597,0,509	0/1:120,4:117:99:477,0,1132	0/1:34,0:33:99:150,0,270	0/1:55,2:52:58.12:292,0,58	0/1:63,0:52:99:425,0,440	0/1:42,1:40:99:301,0,411	0/1:82,1:73:99:706,0,583	0/1:81,0:74:99:483,0,630	0/1:27,0:26:99:198,0,157	0/1:25,1:26:75.10:75,0,223	0/1:28,2:23:21.59:22,0,443	0/1:62,1:64:99:280,0,267	0/1:71,0:64:99:257,0,168	0/1:66,5:70:99:568,0,300	0/1:51,2:52:67.47:392,0,67	0/1:36,0:33:14.92:270,0,15	0/1:33,5:38:18.45:18,0,460	0/1:74,3:71:99:612,0,708	0/1:49,0:48:99:379,0,359	0/1:18,1:19:99:161,0,148
chr10	76595647	.	ACG	A	2258.57	PASS	AB=0.922;AC=27;AF=0.500;AN=54;BaseQRankSum=6.891;DP=1056;FS=0.000;HRun=0;HaplotypeScore=464.7289;InbreedingCoeff=-0.8010;MQ=30.96;MQ0=38;MQRankSum=-6.815;QD=2.25;ReadPosRankSum=-3.049;VQSLOD=0.0651;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,1:31:6.47:6,0,397	0/1:10,2:12:43.67:44,0,106	1/1:23,0:1:3:26,3,0	./.	0/1:26,5:31:10.56:11,0,296	0/1:22,1:22:3.45:3,0,526	0/1:22,1:13:51.09:51,0,80	0/1:47,0:29:64.86:65,0,439	0/1:49,6:51:77.91:123,0,78	0/1:70,14:80:99:559,0,845	0/1:25,3:29:67.32:67,0,307	0/1:32,3:30:44.77:45,0,54	0/1:44,3:38:99:149,0,115	0/1:29,0:27:41.80:42,0,382	0/1:68,0:59:20.13:20,0,768	0/1:53,3:55:1.05:1,0,739	0/1:23,0:22:10.46:10,0,254	0/1:16,1:17:20.94:21,0,412	0/1:20,2:14:71.75:72,0,219	0/1:39,8:47:99:182,0,213	0/1:51,1:47:11.98:12,0,413	0/1:44,10:53:32.67:265,0,33	0/1:32,9:40:51.09:176,0,51	0/0:28,0:28:9:0,9,80	0/1:35,4:39:99:102,0,196	0/1:53,5:52:99:275,0,910	0/1:36,7:42:59.04:59,0,573	0/1:13,1:14:16.20:16,0,147
chr10	76598260	.	AATAT	A	373.46	PASS	AB=0.859;AC=3;AF=0.054;AN=56;BaseQRankSum=10.004;DP=800;FS=64.148;HRun=0;HaplotypeScore=268.8078;InbreedingCoeff=-0.0585;MQ=43.48;MQ0=4;MQRankSum=-7.757;QD=2.92;ReadPosRankSum=4.260;VQSLOD=0.6391;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:27:55.50:0,55,1250	0/0:19,2:21:25.63:0,26,658	0/0:31,0:16:48.08:0,48,951	0/0:38,0:22:69.09:0,69,1699	0/0:32,3:35:37.16:0,37,565	0/0:21,0:21:46.44:0,46,834	0/0:15,0:15:41.97:0,42,837	0/0:44,0:45:99:0,113,3225	0/0:19,2:23:11.21:0,11,728	0/1:44,4:48:99:209,0,1653	0/0:21,3:24:36.01:0,36,646	0/0:27,1:28:58.08:0,58,1247	0/0:17,1:18:44.60:0,45,718	0/0:30,3:34:41.36:0,41,1519	0/0:24,1:27:63.72:0,64,1125	0/0:23,4:27:48.67:0,49,1216	0/0:7,1:8:15.32:0,15,257	0/0:12,0:11:32.99:0,33,605	0/0:16,0:14:36.03:0,36,843	0/0:37,1:37:37.31:0,37,711	0/0:34,0:34:96.06:0,96,2343	0/0:48,5:53:66.56:0,67,1075	0/0:30,3:33:42.59:0,43,680	0/0:16,0:16:29.99:0,30,570	0/1:23,10:33:20.27:20,0,511	0/1:41,5:46:99:244,0,1829	0/0:26,3:33:58.92:0,59,1355	0/0:15,0:15:39.34:0,39,782
chr10	76598271	.	ATG	A	9533.73	PASS	AB=0.830;AC=35;AF=0.625;AN=56;BaseQRankSum=-0.615;DP=870;FS=1.274;HRun=0;HaplotypeScore=240.2352;InbreedingCoeff=0.7399;MQ=45.88;MQ0=6;MQRankSum=2.460;QD=16.99;ReadPosRankSum=3.517;VQSLOD=4.7384;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,19:33:60.24:729,60,0	1/1:13,10:23:27.23:336,27,0	0/0:41,0:20:33.60:0,34,418	0/0:40,1:24:39.96:0,40,562	0/1:34,1:35:16.68:17,0,271	1/1:7,11:20:32.77:363,33,0	1/1:0,17:17:33.10:409,33,0	1/1:24,19:44:31.75:867,32,0	0/0:25,0:25:24.97:0,25,395	1/1:37,18:55:57.46:941,57,0	1/1:16,11:27:26.82:334,27,0	0/0:31,1:32:16.94:0,17,755	0/0:19,0:19:33.11:0,33,527	1/1:14,21:35:57.64:708,58,0	1/1:12,13:25:39.12:483,39,0	1/1:8,25:33:46.51:625,47,0	1/1:3,4:7:8.46:111,8,0	1/1:3,9:11:4.03:222,4,0	0/1:13,4:16:33.10:163,0,33	1/1:27,9:35:35.13:431,35,0	1/1:0,37:37:84.26:1041,84,0	0/0:57,0:58:42.68:0,43,672	0/0:34,0:34:23.90:0,24,393	0/0:22,0:22:41.80:0,42,634	0/0:30,0:35:17.54:0,18,272	0/1:29,17:46:56.37:711,0,56	1/1:19,18:39:42.60:706,43,0	1/1:8,8:17:32.85:339,33,0
chr10	76598286	.	TGC	T	2920.11	PASS	AB=0.965;AC=24;AF=0.429;AN=56;BaseQRankSum=10.630;DP=761;FS=0.332;HRun=0;HaplotypeScore=209.5322;InbreedingCoeff=0.0599;MQ=47.44;MQ0=6;MQRankSum=-0.135;QD=6.11;ReadPosRankSum=8.609;VQSLOD=2.3112;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:36,1:37:51.07:212,0,51	0/1:16,2:18:53.57:104,0,54	0/0:32,0:18:2.29:0,2,427	0/0:36,0:20:28.37:0,28,700	0/0:23,3:26:10.15:0,10,410	1/1:17,0:17:15.81:139,16,0	0/1:21,0:21:34.57:132,0,35	0/1:28,0:28:6.76:207,0,7	0/0:22,1:23:33.03:0,33,549	0/1:46,4:50:99:309,0,232	1/1:17,3:20:25.45:145,25,0	0/0:29,0:29:32.85:0,33,941	0/0:14,1:15:33.11:0,33,649	1/1:30,2:32:16.43:248,16,0	1/1:22,1:22:36.50:185,36,0	0/1:30,2:32:20.78:240,0,21	1/1:5,1:6:8.38:49,8,0	0/1:14,0:13:45.40:68,0,45	0/1:17,0:16:36.41:36,0,173	0/1:25,2:27:99:124,0,116	0/1:46,0:46:99:313,0,116	0/0:41,5:46:45.50:0,46,866	0/0:19,3:22:29.34:0,29,525	0/0:26,0:26:56.77:0,57,936	0/0:20,8:28:2.33:0,2,332	0/1:37,4:40:99:253,0,165	1/1:30,3:33:7.55:263,8,0	0/1:16,0:16:47.84:76,0,48
chr10	76598799	.	ATG	A	359.54	PASS	AB=0.995;AC=22;AF=0.393;AN=56;BaseQRankSum=5.097;DP=820;FS=0.000;HRun=0;HaplotypeScore=165.1299;InbreedingCoeff=0.0532;MQ=55.16;MQ0=11;MQRankSum=-3.465;QD=0.79;ReadPosRankSum=2.297;VQSLOD=2.6789;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:8.69:0,9,180	1/1:5,0:5:0.56:13,1,0	0/0:35,0:17:16.17:0,16,131	0/0:39,0:22:13.66:0,14,146	0/0:32,0:31:17.25:0,17,192	1/1:26,0:26:5.94:43,6,0	1/1:28,0:23:2.37:18,2,0	0/1:31,0:31:3.60:4,0,61	0/0:39,0:39:50.30:0,50,807	0/1:30,0:27:20.40:113,0,20	0/1:18,0:14:0.81:20,0,1	0/0:49,2:51:63.87:0,64,1436	0/0:29,1:31:33.71:0,34,982	1/1:17,0:17:3.43:23,3,0	0/0:36,0:32:2.85:0,3,36	0/1:28,0:26:36.06:36,0,58	0/1:30,0:28:47.74:48,0,59	0/1:19,0:15:33.12:33,0,55	0/1:31,0:28:4.60:5,0,127	1/1:34,0:32:2.90:26,3,0	1/1:47,0:39:0.22:0,0,0	0/0:24,1:25:0.57:0,1,485	0/0:22,1:23:6.58:0,7,556	0/1:38,2:36:10.92:11,0,763	0/0:19,0:19:18.73:0,19,167	0/1:30,0:30:46.39:68,0,46	0/1:39,0:37:51.34:51,0,118	0/0:5,0:5:5.74:0,6,30
chr10	76598821	.	GTC	G	2826.11	PASS	AB=0.966;AC=34;AF=0.607;AN=56;BaseQRankSum=5.323;DP=841;FS=11.510;HRun=0;HaplotypeScore=150.3059;InbreedingCoeff=0.3383;MQ=37.87;MQ0=51;MQRankSum=-7.248;QD=4.87;ReadPosRankSum=-4.810;VQSLOD=0.7347;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,2:22:49.69:50,0,52	1/1:5,1:6:5.96:62,6,0	0/1:21,0:7:18.37:22,0,18	0/0:24,0:7:3.98:0,4,94	0/1:33,0:25:1.22:1,0,54	1/1:24,2:23:5.46:110,5,0	1/1:31,2:14:8.84:81,9,0	1/1:28,1:22:28.98:335,29,0	0/0:40,0:36:68.27:0,68,1106	1/1:35,4:27:28.73:488,29,0	1/1:18,2:15:8.68:80,9,0	0/0:55,0:52:95.57:0,96,1825	0/0:34,0:31:58.54:0,59,1194	1/1:17,1:15:2.16:65,2,0	1/1:40,2:34:6.45:48,6,0	0/1:27,2:24:18.90:121,0,19	0/1:23,3:22:18.34:176,0,18	0/1:20,0:13:16.49:150,0,16	0/1:23,1:17:2.87:187,0,3	1/1:29,4:27:29.68:246,30,0	1/1:60,3:40:17.88:136,18,0	0/0:34,0:30:45.73:0,46,740	0/0:24,0:24:34.21:0,34,677	0/0:49,0:43:55.26:0,55,1046	0/1:22,0:21:16.77:36,0,17	1/1:25,3:25:30.84:362,31,0	1/1:32,3:31:12.07:252,12,0	1/1:4,0:4:2.44:6,2,0
chr10	76598823	.	CTG	C	618.58	PASS	AB=0.979;AC=21;AF=0.389;AN=54;BaseQRankSum=6.143;DP=841;FS=8.070;HRun=0;HaplotypeScore=156.8338;InbreedingCoeff=0.0585;MQ=36.25;MQ0=57;MQRankSum=-6.428;QD=1.32;ReadPosRankSum=-3.646;VQSLOD=0.8514;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:21:6.63:0,7,166	1/1:8,0:7:2.91:17,3,0	./.	0/0:23,0:4:4.23:0,4,55	0/0:33,0:25:14.26:0,14,168	1/1:26,0:23:2.41:38,2,0	1/1:32,2:15:5.45:28,5,0	0/1:26,3:22:12.47:142,0,12	0/0:44,0:40:73.90:0,74,1172	0/1:41,0:28:33.36:156,0,33	0/1:18,0:13:0.81:20,0,1	0/0:55,0:52:99:0,101,1787	0/0:35,0:32:70.08:0,70,1122	0/1:16,0:13:0.55:17,0,1	0/1:41,1:33:0.13:0,0,12	0/1:27,1:22:20.53:40,0,21	0/1:26,0:22:52.98:53,0,106	0/1:19,0:12:34.65:35,0,63	0/1:22,1:16:47.46:47,0,54	1/1:30,2:25:1.76:24,2,0	1/1:64,1:40:0.89:1,1,0	0/0:36,0:31:57:0,57,854	0/0:24,0:23:41.93:0,42,665	0/0:51,0:45:83.86:0,84,1257	0/0:22,0:21:17.30:0,17,147	0/1:26,1:24:54.46:99,0,54	0/1:35,0:31:53.18:53,0,68	0/0:4,0:4:5.74:0,6,30
chr10	76598833	.	C	CTG	1110.93	PASS	AB=0.957;AC=27;AF=0.500;AN=54;BaseQRankSum=8.295;DP=847;FS=4.881;HRun=0;HaplotypeScore=153.0071;InbreedingCoeff=0.1819;MQ=34.11;MQ0=85;MQRankSum=-6.045;QD=2.32;ReadPosRankSum=-2.468;VQSLOD=1.9478;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,2:17:0.06:69,0,0	1/1:6,0:5:2.68:11,3,0	./.	0/0:29,0:3:2.97:0,3,36	0/1:36,2:26:27.05:63,0,27	0/0:24,0:20:2.01:0,2,7	1/1:35,0:14:2.99:24,3,0	0/1:34,1:17:57.45:57,0,129	0/0:44,0:40:71.66:0,72,935	0/1:48,0:27:99:193,0,130	1/1:21,0:14:4.78:18,5,0	0/0:53,0:49:98.30:0,98,1252	0/0:35,0:31:68.93:0,69,881	0/1:15,0:12:2.46:3,0,2	1/1:35,0:25:4.31:14,4,0	1/1:30,0:20:5.06:29,5,0	0/1:25,1:22:43.26:81,0,43	0/1:18,1:10:6.56:57,0,7	1/1:16,1:9:3.47:81,3,0	1/1:35,0:26:17.19:128,17,0	0/0:66,0:32:0:0,0,0	0/0:37,0:31:57.18:0,57,751	0/0:24,0:22:39.13:0,39,534	0/0:52,0:44:87.29:0,87,1184	0/1:23,5:24:24.20:178,0,24	0/1:29,0:22:92.39:104,0,92	1/1:28,0:24:2.63:89,3,0	1/1:6,1:6:8.20:73,8,0
chr10	76598845	.	GTC	G	84.22	PASS	AB=0.989;AC=12;AF=0.240;AN=50;BaseQRankSum=6.310;DP=898;FS=4.884;HRun=0;HaplotypeScore=145.3187;InbreedingCoeff=0.0104;MQ=31.50;MQ0=137;MQRankSum=-4.074;QD=0.27;ReadPosRankSum=-4.198;VQSLOD=1.0788;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:10:5.80:0,6,32	1/1:7,0:5:2.99:23,3,0	./.	0/0:15,0:1:3.01:0,3,53	0/1:37,0:18:11.64:12,0,20	0/0:25,1:21:1.33:0,1,5	./.	0/0:37,0:14:22.91:0,23,289	0/0:50,0:40:71.49:0,71,1235	0/1:41,0:19:21.88:22,0,168	./.	0/0:54,0:45:58.01:0,58,1420	0/0:41,1:38:66.97:0,67,1260	0/0:25,0:18:1.82:0,2,6	0/0:36,0:23:2.74:0,3,12	0/1:28,0:16:11.80:12,0,12	0/0:29,1:23:4.74:0,5,194	0/0:20,0:9:9.41:0,9,74	1/1:19,0:6:3.43:25,3,0	0/1:42,0:28:29.83:53,0,30	0/1:62,2:26:0:0,0,0	0/0:44,0:34:57.01:0,57,992	0/0:29,0:25:33.01:0,33,550	0/0:68,2:55:92.65:0,93,1646	0/1:31,0:26:21.15:21,0,38	0/1:30,2:23:31.01:31,0,175	0/0:23,0:18:1.46:0,1,57	0/1:11,0:8:15.05:15,0,33
chr10	76598851	.	GTC	G	251.92	PASS	AB=0.944;AC=8;AF=0.154;AN=52;BaseQRankSum=5.192;DP=958;FS=5.147;HRun=0;HaplotypeScore=139.7767;InbreedingCoeff=0.0378;MQ=30.09;MQ0=163;MQRankSum=-4.200;QD=1.13;ReadPosRankSum=-0.881;VQSLOD=2.2692;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:7:2.75:0,3,38	1/1:11,1:8:3.87:25,4,0	./.	0/0:14,0:1:3.01:0,3,57	0/0:43,0:20:2.25:0,2,56	0/0:24,0:19:2.10:0,2,8	0/1:39,2:12:0:0,0,0	0/1:39,1:12:36.39:36,0,254	0/0:55,0:44:64.47:0,64,1155	0/1:46,1:24:99:108,0,265	0/0:20,1:14:0:0,0,0	0/0:58,0:44:62.30:0,62,1168	0/0:40,2:38:56.34:0,56,1115	0/0:27,0:20:2.37:0,2,9	0/0:41,1:27:2.74:0,3,12	0/0:30,2:18:2.93:0,3,19	0/0:35,1:25:30.84:0,31,320	0/0:21,0:7:8.94:0,9,97	0/1:26,2:7:25.33:84,0,25	0/0:37,2:24:6.02:0,6,93	./.	0/0:40,0:29:32.12:0,32,834	0/0:31,0:25:13.10:0,13,430	0/0:78,0:59:90.26:0,90,1608	0/0:31,0:24:8.64:0,9,118	0/1:29,2:20:76.92:77,0,183	0/1:20,3:17:39.61:40,0,99	0/0:12,0:9:8.93:0,9,96
chr10	76598865	.	GTC	G	223.08	PASS	AB=0.958;AC=12;AF=0.231;AN=52;BaseQRankSum=5.560;DP=1017;FS=13.343;HRun=0;HaplotypeScore=131.2257;InbreedingCoeff=0.0119;MQ=28.28;MQ0=212;MQRankSum=-5.000;QD=0.63;ReadPosRankSum=-2.420;VQSLOD=1.1673;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:9:0.46:1,0,0	0/0:15,0:9:2.63:0,3,11	./.	0/0:14,0:1:3.01:0,3,57	0/0:46,0:23:3.01:0,3,58	0/0:26,0:19:2.31:0,2,8	0/0:48,0:15:5.77:0,6,34	0/1:49,0:14:8.13:8,0,90	0/0:52,0:39:66.04:0,66,1150	0/1:45,1:22:99:110,0,162	0/0:20,2:11:0:0,0,0	0/0:58,0:41:24.08:0,24,988	0/0:44,0:37:37.14:0,37,928	0/0:26,2:19:2.37:0,2,8	./.	1/1:36,1:20:2.94:18,3,0	0/0:37,1:23:24.49:0,24,364	0/1:25,1:10:5.73:6,0,107	0/1:33,1:9:17.85:77,0,18	0/0:39,0:25:6.02:0,6,86	0/1:75,2:26:0.01:0,0,0	0/0:41,0:29:22.94:0,23,762	0/0:30,0:22:26.80:0,27,366	0/0:84,0:63:90.04:0,90,1586	0/0:35,0:27:8.49:0,8,117	0/1:28,1:18:99:102,0,174	0/1:19,1:14:12.08:12,0,86	0/1:10,2:9:9.96:10,0,101
chr10	76598869	.	GTGTC	G	964.39	PASS	AB=0.929;AC=16;AF=0.308;AN=52;BaseQRankSum=5.889;DP=1046;FS=20.794;HRun=0;HaplotypeScore=133.9348;InbreedingCoeff=0.0676;MQ=28.08;MQ0=222;MQRankSum=-8.368;QD=2.25;ReadPosRankSum=-2.074;VQSLOD=0.2130;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:8:0.94:2,1,0	0/0:15,1:10:3.06:0,3,12	./.	0/0:12,0:1:2.99:0,3,24	0/0:49,0:25:3.01:0,3,78	1/1:21,3:17:0.86:2,1,0	0/0:50,0:17:0.24:0,0,49	0/1:50,2:15:38.87:210,0,39	0/0:55,0:42:64.56:0,65,1382	0/1:41,8:23:99:407,0,187	0/1:19,3:12:0:0,0,0	0/0:60,0:43:23.65:0,24,1366	0/0:44,0:36:57.43:0,57,1225	1/1:23,4:19:0.89:2,1,0	./.	1/1:33,4:20:2.72:45,3,0	0/0:36,1:21:14.61:0,15,515	0/1:26,0:10:14.07:14,0,201	0/1:32,2:11:57.36:159,0,57	0/0:36,4:23:6.02:0,6,137	0/1:79,1:30:0.01:0,0,0	0/0:43,0:29:45.13:0,45,1026	0/0:31,0:23:21.02:0,21,260	0/0:89,0:65:93.01:0,93,1831	0/0:37,0:29:8.80:0,9,161	0/1:30,4:18:99:189,0,219	0/1:16,2:12:57.58:58,0,123	0/0:11,1:9:6.02:0,6,156
chr10	76598871	.	GTC	G	406.59	PASS	AB=0.996;AC=12;AF=0.231;AN=52;BaseQRankSum=6.192;DP=1039;FS=36.862;HRun=0;HaplotypeScore=126.5353;InbreedingCoeff=0.0405;MQ=28.12;MQ0=221;MQRankSum=-7.506;QD=1.01;ReadPosRankSum=-1.684;VQSLOD=0.5588;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:8:2.79:13,3,0	0/0:16,0:10:3.20:0,3,14	./.	0/0:13,0:1:2.99:0,3,24	0/0:48,0:25:3.01:0,3,55	0/0:24,0:17:1.49:0,1,4	0/1:50,0:18:5.66:6,0,46	0/1:51,0:15:23.33:106,0,23	0/0:55,0:42:68.30:0,68,1091	0/1:48,0:23:99:135,0,136	0/0:21,0:12:0:0,0,0	0/0:58,2:43:18.66:0,19,1093	0/0:41,2:35:21.57:0,22,913	0/0:27,0:19:1.55:0,2,4	./.	1/1:36,0:19:2.80:13,3,0	0/0:36,1:21:33.27:0,33,476	0/1:27,0:12:32.72:33,0,184	0/1:33,0:11:55.20:113,0,55	0/0:37,1:22:6.02:0,6,111	0/1:82,0:31:0.01:0,0,0	0/0:45,0:30:45.11:0,45,765	0/0:27,1:21:21.01:0,21,245	0/0:91,0:67:85.29:0,85,1405	0/0:37,0:29:8.58:0,9,126	0/1:33,0:18:94.61:95,0,137	0/1:18,0:12:22.46:22,0,76	0/0:13,0:10:8.89:0,9,127
chr10	76598873	.	CTG	C	108	PASS	AB=0.961;AC=10;AF=0.200;AN=50;BaseQRankSum=5.998;DP=1052;FS=26.953;HRun=0;HaplotypeScore=129.0766;InbreedingCoeff=0.0164;MQ=28.37;MQ0=222;MQRankSum=-6.245;QD=0.39;ReadPosRankSum=-0.406;VQSLOD=0.9540;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:7:0.46:1,0,0	0/0:16,1:11:2.31:0,2,10	./.	./.	0/0:46,0:25:3.01:0,3,34	0/0:25,0:18:1.49:0,1,4	0/0:48,1:19:2.95:0,3,38	0/1:52,0:15:11.20:11,0,33	0/0:57,0:44:62.69:0,63,971	0/1:48,0:22:35.56:36,0,140	0/0:22,1:13:0:0,0,0	0/0:63,0:45:11.82:0,12,955	0/0:43,2:37:51.82:0,52,865	0/0:29,0:20:1.55:0,2,4	./.	1/1:35,1:19:2.22:7,2,0	0/0:38,0:21:23.29:0,23,335	0/1:26,1:12:17.90:18,0,170	0/1:32,2:12:26.14:90,0,26	0/0:39,1:24:6.02:0,6,81	0/0:79,0:29:2.37:0,2,9	0/0:48,0:33:47.34:0,47,695	0/0:25,0:19:12.02:0,12,158	0/0:88,3:67:43.67:0,44,1171	0/0:34,0:27:6.01:0,6,77	0/1:36,0:18:30.15:30,0,103	0/1:15,2:12:31.62:32,0,71	0/0:15,0:11:11.97:0,12,126
chr10	76598885	.	GTGTC	G	179.67	PASS	AB=0.997;AC=17;AF=0.340;AN=50;BaseQRankSum=7.837;DP=1145;FS=14.265;HRun=0;HaplotypeScore=152.3729;InbreedingCoeff=0.0223;MQ=27.91;MQ0=230;MQRankSum=-8.205;QD=0.37;ReadPosRankSum=-1.055;VQSLOD=2.0979;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:8:1.36:2,1,0	1/1:21,1:16:1.38:6,1,0	./.	./.	0/0:40,0:24:3.01:0,3,62	1/1:25,0:18:0.86:2,1,0	0/0:66,0:26:0.58:0,1,90	0/1:52,0:14:31.89:32,0,38	0/0:58,2:46:33.48:0,33,1331	0/1:54,0:26:99:124,0,276	0/0:28,0:19:0.42:0,0,1	0/0:68,0:48:9.81:0,10,1438	0/0:51,0:42:64.22:0,64,1417	1/1:32,0:21:0.76:1,1,0	./.	0/1:42,0:24:4.74:5,0,13	0/1:44,1:23:43.26:43,0,412	0/0:32,0:16:1.54:0,2,335	0/1:34,0:13:33.02:33,0,81	0/0:46,0:29:6.02:0,6,155	1/1:98,0:39:1.34:4,1,0	0/0:51,0:35:54.15:0,54,1108	0/0:25,0:18:4:0,4,179	0/0:97,0:72:99:0,105,2038	0/0:38,0:30:6.02:0,6,141	0/1:40,0:19:42.07:42,0,241	0/1:16,0:11:3.07:3,0,124	0/0:14,0:10:11.59:0,12,186
chr10	76598895	.	CTG	C	46.13	PASS	AB=0.997;AC=7;AF=0.146;AN=48;BaseQRankSum=3.336;DP=1254;FS=7.049;HRun=0;HaplotypeScore=150.8700;InbreedingCoeff=0.0749;MQ=27.14;MQ0=256;MQRankSum=-2.921;QD=0.18;ReadPosRankSum=-0.691;VQSLOD=2.0614;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:24,0:16:3.84:0,4,26	./.	./.	0/0:40,1:25:3.01:0,3,48	0/1:28,0:19:0:0,0,0	0/1:65,0:26:19.20:19,0,62	0/1:65,0:17:95.50:95,0,148	0/0:61,2:48:48.01:0,48,900	0/0:66,0:32:61.08:0,61,898	1/1:32,0:20:0.46:1,0,0	0/0:70,2:51:31.61:0,32,956	0/0:52,0:40:76.46:0,76,1214	0/0:35,0:22:0:0,0,0	./.	0/0:46,0:28:9:0,9,148	0/0:49,0:27:19.81:0,20,351	0/0:33,2:17:2.24:0,2,253	0/1:45,0:12:10.54:11,0,107	0/0:42,1:28:6.02:0,6,100	0/0:107,0:41:0:0,0,0	0/0:57,0:42:54.15:0,54,827	0/0:25,1:16:9.03:0,9,149	0/0:103,1:75:65.42:0,65,1521	0/0:34,0:29:6.01:0,6,99	0/0:45,1:22:8.13:0,8,420	0/1:18,0:12:19.33:19,0,90	0/0:16,0:12:2.88:0,3,108
chr10	76598899	.	G	GTC	79.66	PASS	AB=0.978;AC=7;AF=0.146;AN=48;BaseQRankSum=3.814;DP=1291;FS=12.935;HRun=0;HaplotypeScore=159.8572;InbreedingCoeff=0.2319;MQ=27.13;MQ0=255;MQRankSum=-3.745;QD=0.33;ReadPosRankSum=-0.818;VQSLOD=2.1133;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:15:0.47:0,0,1	0/1:25,0:17:6.67:8,0,7	./.	./.	0/0:42,0:25:3.01:0,3,43	0/1:27,0:18:0:0,0,0	0/0:71,0:26:7.36:0,7,108	0/0:69,0:20:52.51:0,53,409	0/0:65,0:50:56.12:0,56,922	0/0:69,0:34:45.44:0,45,847	1/1:32,0:20:0.47:1,0,0	0/0:73,0:52:83.65:0,84,1079	0/0:54,0:42:17.71:0,18,997	./.	./.	0/0:45,0:28:8.70:0,9,134	0/0:54,0:29:19.64:0,20,369	0/1:33,2:17:99:123,0,204	0/0:49,0:12:19.34:0,19,170	0/0:41,0:28:5.39:0,5,90	0/1:109,0:42:0.07:0,0,0	0/0:59,0:42:62.63:0,63,839	0/0:27,0:16:9.03:0,9,137	0/0:108,1:78:99:0,111,1551	0/0:36,0:29:5.99:0,6,89	0/0:48,0:23:35.70:0,36,428	0/0:18,0:12:14.76:0,15,149	0/1:16,1:13:39.09:39,0,102
chr10	76598909	.	C	CTG	231.28	PASS	AB=0.976;AC=14;AF=0.269;AN=52;BaseQRankSum=5.148;DP=1322;FS=2.696;HRun=0;HaplotypeScore=156.8342;InbreedingCoeff=0.0194;MQ=26.76;MQ0=256;MQRankSum=-5.647;QD=0.37;ReadPosRankSum=-1.821;VQSLOD=2.1390;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:18:0.47:0,0,1	0/0:24,0:16:3.56:0,4,16	./.	./.	0/0:40,0:25:3.01:0,3,41	0/1:24,1:19:0:0,0,0	0/0:74,0:25:6.45:0,6,105	0/1:66,1:15:47.92:48,0,280	0/0:62,0:48:61.45:0,61,818	0/1:74,0:38:11.73:12,0,779	0/1:31,0:20:0.02:0,0,0	0/0:68,0:51:47.74:0,48,887	0/1:52,4:44:37.05:37,0,886	0/1:40,2:28:0:0,0,0	1/1:38,2:27:0.47:1,0,0	0/0:47,1:31:4.62:0,5,117	0/1:55,0:28:64.83:65,0,166	0/1:34,3:18:99:136,0,129	0/1:53,0:10:20.22:20,0,85	0/0:44,0:29:5.98:0,6,82	1/1:125,1:45:2.22:7,2,0	0/0:55,1:39:50.64:0,51,651	0/0:27,0:14:12.04:0,12,164	0/0:114,2:83:99:0,107,1360	0/0:32,0:25:8.02:0,8,73	0/0:49,0:23:28.90:0,29,433	0/0:17,0:11:11.80:0,12,150	0/1:18,0:14:26.61:27,0,73
chr10	76598913	.	GTC	G	69.64	PASS	AB=0.961;AC=12;AF=0.231;AN=52;BaseQRankSum=5.091;DP=1340;FS=0.000;HRun=0;HaplotypeScore=162.4043;InbreedingCoeff=0.1285;MQ=26.94;MQ0=255;MQRankSum=-4.981;QD=0.14;ReadPosRankSum=-2.021;VQSLOD=2.5046;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:21:0.01:0,0,0	1/1:24,1:17:3.13:19,3,0	./.	./.	0/0:40,0:26:3:0,3,25	0/1:22,2:19:0:0,0,0	0/0:69,2:25:8.87:0,9,136	0/0:67,1:13:35.37:0,35,370	0/0:60,1:49:66.82:0,67,1184	0/1:75,4:41:20.93:21,0,984	0/0:27,4:20:0:0,0,1	0/0:66,0:51:59.21:0,59,1209	0/0:57,0:44:43.17:0,43,1248	0/0:38,3:28:1.67:0,2,33	1/1:40,1:27:0.47:1,0,0	0/0:47,2:31:8.88:0,9,121	0/1:54,2:29:55.27:55,0,208	0/1:34,2:18:39.02:39,0,211	0/1:52,2:11:24.22:24,0,184	0/0:41,4:30:6.41:0,6,111	0/1:124,2:46:0.14:0,0,0	0/0:56,0:40:6.38:0,6,812	0/0:26,0:14:12.04:0,12,231	0/0:118,0:85:99:0,109,1827	0/0:34,0:27:9:0,9,95	0/0:51,1:23:11.21:0,11,424	0/0:19,1:14:17.72:0,18,190	0/1:19,1:16:26.45:26,0,86
chr10	76598927	.	GTC	G	241.70	PASS	AB=0.960;AC=15;AF=0.288;AN=52;BaseQRankSum=5.814;DP=1357;FS=11.602;HRun=0;HaplotypeScore=163.4832;InbreedingCoeff=-0.0497;MQ=27.72;MQ0=218;MQRankSum=-6.717;QD=0.43;ReadPosRankSum=-2.247;VQSLOD=1.7332;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:27:0.42:0,0,1	0/1:20,2:16:0.24:0,0,0	./.	./.	0/0:35,0:20:2.94:0,3,18	0/1:26,1:22:0:0,0,0	0/0:73,1:28:8.88:0,9,95	0/1:72,0:13:19.43:19,0,150	0/0:58,0:46:63.57:0,64,1055	0/1:85,4:51:99:102,0,587	0/0:31,4:25:0.47:0,0,1	0/0:72,0:57:61.47:0,61,1259	0/0:56,0:43:38.61:0,39,1048	0/0:38,2:28:2.52:0,3,55	1/1:44,0:32:2.68:11,3,0	0/1:47,1:34:6.41:6,0,98	0/1:57,0:31:44.84:45,0,104	0/1:34,2:19:25.30:25,0,227	0/1:44,2:12:41.75:42,0,96	0/0:46,3:39:6.32:0,6,41	0/0:134,0:54:0:0,0,0	0/0:61,0:47:36.57:0,37,746	0/0:23,0:13:4.28:0,4,221	0/0:111,1:82:96.07:0,96,1778	1/1:30,0:24:2.84:14,3,0	0/1:50,1:24:67.33:67,0,226	0/1:19,1:15:13.86:14,0,123	0/1:16,1:14:25.40:25,0,52
chr10	76598929	.	CTG	C	240.20	PASS	AB=0.959;AC=14;AF=0.269;AN=52;BaseQRankSum=5.078;DP=1354;FS=2.803;HRun=0;HaplotypeScore=166.6307;InbreedingCoeff=0.0883;MQ=27.77;MQ0=215;MQRankSum=-6.114;QD=0.43;ReadPosRankSum=-0.380;VQSLOD=2.6345;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:44,3:28:0.01:0,0,0	0/0:19,0:16:2.07:0,2,18	./.	./.	0/0:31,2:19:3.01:0,3,33	0/0:23,2:22:0:0,0,0	0/0:71,2:28:2.97:0,3,49	0/1:67,2:12:23.94:58,0,24	0/0:57,1:45:46.67:0,47,883	0/1:81,5:52:62.39:62,0,596	1/1:32,2:25:0.46:1,0,0	0/0:70,2:58:53.98:0,54,1211	0/0:55,0:43:36.17:0,36,830	0/0:36,2:28:4.26:0,4,45	0/0:45,0:34:0:0,0,0	0/1:42,4:35:24.72:25,0,71	0/1:56,1:31:54.83:55,0,71	0/1:33,1:19:18.53:19,0,183	1/1:44,0:12:3.24:17,3,0	0/1:41,0:36:0.01:0,0,0	0/0:132,0:52:0:0,0,0	0/0:58,1:44:44.33:0,44,637	0/0:24,0:14:17.64:0,18,238	0/0:111,2:84:82.60:0,83,1605	1/1:21,8:24:3.01:38,3,0	0/1:50,2:26:88.33:88,0,167	0/0:20,0:16:7.49:0,7,89	0/0:16,0:13:2.22:0,2,36
chr10	76598943	.	GTC	G	84.59	PASS	AB=0.965;AC=12;AF=0.240;AN=50;BaseQRankSum=3.771;DP=1141;FS=0.000;HRun=0;HaplotypeScore=143.8351;InbreedingCoeff=0.0450;MQ=28.93;MQ0=167;MQRankSum=-3.741;QD=0.20;ReadPosRankSum=-2.887;VQSLOD=1.2499;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:38,1:24:0:0,0,0	0/1:19,1:16:0.76:1,0,12	./.	./.	0/0:23,0:14:3.01:0,3,48	0/1:25,0:20:0:0,0,0	0/1:65,0:20:8.27:8,0,44	0/1:57,0:7:11.24:36,0,11	0/0:45,0:36:57.01:0,57,1003	0/0:79,0:51:23.38:0,23,950	0/0:31,1:25:0.47:0,0,1	0/0:61,0:49:65.48:0,65,1499	0/0:45,1:34:59.28:0,59,947	0/0:24,3:19:2.94:0,3,56	./.	0/1:33,4:28:6.97:7,0,38	0/1:43,4:22:76.28:82,0,76	0/1:30,1:16:27.91:28,0,185	0/1:38,1:10:1.03:1,0,53	0/0:41,4:37:2.99:0,3,10	0/0:114,2:40:0:0,0,0	0/0:50,0:40:54:0,54,807	0/0:24,0:15:20.96:0,21,363	0/0:107,0:83:99:0,102,1991	1/1:23,0:20:2.80:13,3,0	0/1:38,2:21:23.69:24,0,230	0/0:18,2:15:14.89:0,15,145	0/0:8,0:8:14.72:0,15,131
chr10	76598955	.	GTC	G	456.70	PASS	AB=0.922;AC=13;AF=0.283;AN=46;BaseQRankSum=4.322;DP=960;FS=0.000;HRun=0;HaplotypeScore=125.0612;InbreedingCoeff=0.1989;MQ=30.86;MQ0=127;MQRankSum=-6.613;QD=1.32;ReadPosRankSum=-2.908;VQSLOD=1.7608;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:34,2:22:0.02:0,0,0	1/1:16,1:13:5.64:26,6,0	./.	./.	0/0:16,1:10:2.94:0,3,18	0/1:21,3:19:0.07:0,0,0	0/0:47,1:11:0.88:0,1,2	0/1:45,1:3:46.75:70,0,47	0/0:42,1:36:48.69:0,49,915	0/1:60,3:45:99:102,0,1321	./.	0/0:51,2:46:98.24:0,98,1605	0/0:39,2:32:69.38:0,69,1066	0/0:21,2:17:2.25:0,2,51	./.	1/1:22,7:23:6.02:90,6,0	0/1:28,5:16:67.70:73,0,68	0/1:18,2:12:95.26:108,0,95	0/0:32,1:8:20.85:0,21,260	1/1:37,5:34:2.99:24,3,0	./.	0/0:43,2:37:57.16:0,57,996	0/0:22,1:15:32.92:0,33,506	0/0:94,2:77:99:0,130,2434	0/0:19,0:17:3.01:0,3,58	0/1:31,3:23:93.35:93,0,394	0/0:16,3:16:17.95:0,18,257	0/0:10,0:9:15.02:0,15,227
chr10	76598957	.	CTG	C	134.84	PASS	AB=0.994;AC=9;AF=0.196;AN=46;BaseQRankSum=3.298;DP=952;FS=0.000;HRun=0;HaplotypeScore=125.6211;InbreedingCoeff=0.1918;MQ=31.31;MQ0=116;MQRankSum=-4.992;QD=0.60;ReadPosRankSum=-0.089;VQSLOD=2.3639;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:22:0.42:0,0,1	0/0:16,0:12:0.17:0,0,2	./.	./.	0/0:16,0:9:3.01:0,3,35	0/1:22,0:19:0:0,0,0	0/0:45,0:10:2.94:0,3,18	0/1:45,0:3:28.15:33,0,28	0/0:44,1:38:59.26:0,59,851	0/0:65,0:48:8.04:0,8,1162	./.	0/0:56,0:49:97.71:0,98,1438	0/0:41,0:32:63.15:0,63,965	0/0:22,0:16:3.01:0,3,36	./.	1/1:28,0:21:6:54,6,0	0/1:32,0:16:38.01:38,0,73	0/1:22,0:13:42.97:43,0,121	0/0:33,0:9:17.52:0,18,217	1/1:40,1:33:3.01:39,3,0	./.	0/0:45,0:38:50.91:0,51,823	0/0:26,0:18:30.04:0,30,435	0/0:95,0:76:99:0,137,2151	0/0:18,0:16:3.01:0,3,52	0/1:33,1:23:46.37:46,0,367	0/0:19,0:16:15.93:0,16,220	0/0:10,0:9:15.05:0,15,233
chr10	76598981	.	GTGTC	G	267.08	PASS	AB=0.991;AC=11;AF=0.262;AN=42;BaseQRankSum=8.068;DP=781;FS=2.327;HRun=0;HaplotypeScore=126.2431;InbreedingCoeff=0.0713;MQ=35.32;MQ0=66;MQRankSum=-6.991;QD=1.06;ReadPosRankSum=0.938;VQSLOD=2.5981;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,1:20:0:0,0,0	0/1:14,0:11:0.03:0,0,0	0/1:8,0:2:0:0,0,14	./.	./.	0/1:21,0:18:0:0,0,0	0/0:28,0:9:1.55:0,2,4	0/0:22,0:2:6.02:0,6,65	0/0:42,0:38:62.86:0,63,853	0/1:56,1:50:99:141,0,487	./.	0/0:48,0:45:84.37:0,84,1507	0/0:38,0:30:71.58:0,72,1356	./.	./.	./.	0/0:25,0:14:15.01:0,15,122	0/0:16,0:9:11.99:0,12,125	0/1:31,1:10:20.30:20,0,150	1/1:33,0:29:2.92:17,3,0	./.	0/0:34,0:33:31.17:0,31,844	0/0:21,0:18:33.09:0,33,668	0/0:92,0:81:99:0,138,2826	0/0:6,3:9:3.01:0,3,36	0/1:29,0:24:49.91:152,0,50	0/1:21,0:19:18.02:18,0,51	0/1:8,0:8:29.13:29,0,43
chr10	76598989	.	GTC	G	126.46	PASS	AB=0.977;AC=12;AF=0.286;AN=42;BaseQRankSum=5.860;DP=701;FS=1.807;HRun=0;HaplotypeScore=111.4802;InbreedingCoeff=0.2257;MQ=36.51;MQ0=57;MQRankSum=-4.913;QD=0.74;ReadPosRankSum=-0.915;VQSLOD=2.1750;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:18:0.47:1,0,0	0/0:11,0:10:1.53:0,2,4	0/1:18,0:2:10.83:11,0,45	./.	./.	1/1:16,0:15:1.65:6,2,0	./.	0/0:22,0:8:5.98:0,6,60	0/0:44,0:41:78.09:0,78,1181	0/1:52,0:47:64.11:64,0,341	./.	0/0:41,0:40:77.87:0,78,1280	0/0:34,0:28:57.39:0,57,1273	0/0:13,0:10:0.89:0,1,2	./.	./.	0/0:20,0:12:8.87:0,9,104	0/0:12,0:5:3.11:0,3,9	0/0:25,0:10:2.91:0,3,146	0/0:27,0:23:1.85:0,2,7	./.	0/0:32,0:31:54.06:0,54,884	0/0:21,0:18:36.11:0,36,624	0/0:83,0:74:99:0,144,2538	1/1:6,0:6:2.92:17,3,0	0/1:25,3:24:51.70:72,0,52	1/1:20,0:18:3.61:66,4,0	0/1:7,0:7:1.51:2,0,23
chr10	76598991	.	CTGTGTCTG	C	3629.86	PASS	AB=0.836;AC=17;AF=0.370;AN=46;BaseQRankSum=8.337;DP=668;FS=3.545;HRun=0;HaplotypeScore=127.9145;InbreedingCoeff=0.3412;MQ=37.10;MQ0=54;MQRankSum=-9.845;QD=15.45;ReadPosRankSum=-0.883;VQSLOD=2.8378;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,7:17:0:0,0,0	1/1:6,5:10:3.48:43,3,0	0/1:20,0:2:16.36:16,0,57	0/0:12,0:3:2.84:0,3,14	./.	0/1:7,7:13:0:0,0,0	0/1:22,0:8:0:0,0,0	0/0:19,0:8:3.01:0,3,53	0/0:41,0:38:78.25:0,78,2013	0/1:19,29:46:99:1765,0,118	./.	0/0:39,0:38:68.76:0,69,2169	0/0:34,0:28:58.65:0,59,2407	0/0:9,2:10:0.89:0,1,2	./.	./.	0/1:16,2:11:61.32:76,0,61	0/0:10,0:4:6.02:0,6,89	0/1:20,1:8:14.32:115,0,14	0/0:9,16:22:1.76:0,2,7	./.	0/0:31,0:30:51.16:0,51,1411	0/0:19,0:17:33.11:0,33,1140	0/0:85,0:77:99:0,144,4891	1/1:5,0:5:3.01:42,3,0	1/1:17,8:22:36.59:994,37,0	1/1:7,8:17:17.40:349,17,0	1/1:1,4:7:9.03:230,9,0
chr10	76598995	.	GTC	G	890.39	PASS	AB=0.989;AC=16;AF=0.381;AN=42;BaseQRankSum=9.953;DP=614;FS=2.718;HRun=0;HaplotypeScore=100.1628;InbreedingCoeff=0.5212;MQ=37.72;MQ0=50;MQRankSum=-10.097;QD=5.86;ReadPosRankSum=-0.167;VQSLOD=2.7177;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:11,0:10:2.90:22,3,0	0/0:24,0:2:3.48:0,3,53	0/0:19,0:7:8.63:0,9,54	./.	1/1:13,0:12:1.65:6,2,0	./.	0/0:16,0:7:3.01:0,3,39	0/0:37,0:36:75.21:0,75,1351	0/1:45,0:42:16.81:427,0,17	./.	0/0:34,0:33:63:0,63,1097	0/0:33,0:29:65.29:0,65,1340	0/0:8,0:7:0:0,0,0	./.	./.	0/1:17,0:9:8.37:8,0,29	0/0:8,0:4:6:0,6,51	1/1:13,0:3:5.96:44,6,0	0/0:24,1:21:0:0,0,0	./.	0/0:27,0:27:48.14:0,48,788	0/0:19,0:17:36.10:0,36,624	0/0:80,1:75:99:0,150,2672	1/1:6,0:6:2.92:17,3,0	1/1:25,0:20:46.91:336,47,0	1/1:15,0:14:14.58:112,15,0	1/1:6,0:6:8.88:61,9,0
chr10	76598997	.	CTG	C	1436.40	PASS	AB=0.933;AC=14;AF=0.368;AN=38;BaseQRankSum=9.292;DP=604;FS=3.717;HRun=0;HaplotypeScore=96.2094;InbreedingCoeff=0.6588;MQ=38.00;MQ0=52;MQRankSum=-9.669;QD=10.33;ReadPosRankSum=0.608;VQSLOD=3.0531;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:7,3:10:2.92:41,3,0	0/0:25,0:2:5.38:0,5,41	0/0:21,0:7:13.06:0,13,107	./.	0/1:11,2:12:0.01:0,0,0	./.	0/0:17,0:7:2.96:0,3,19	0/0:37,0:36:74.89:0,75,1261	1/1:40,4:40:22.38:796,22,0	./.	0/0:35,0:34:64.43:0,64,1079	0/0:33,0:29:48.25:0,48,1276	0/0:7,1:7:0:0,0,0	./.	./.	0/1:14,0:8:11.01:15,0,11	0/0:7,0:3:5.54:0,6,26	1/1:9,2:2:5.91:59,6,0	./.	./.	0/0:26,0:26:51.13:0,51,801	0/0:18,0:16:33.11:0,33,595	0/0:83,0:77:99:0,156,2706	./.	1/1:16,9:20:36.56:457,37,0	1/1:15,0:14:12.24:107,12,0	1/1:6,0:6:8.99:104,9,0
chr10	76599001	.	GTC	G	548.25	PASS	AB=1.000;AC=17;AF=0.472;AN=36;BaseQRankSum=9.852;DP=602;FS=3.167;HRun=0;HaplotypeScore=99.2452;InbreedingCoeff=0.6111;MQ=38.47;MQ0=51;MQRankSum=-9.402;QD=3.66;ReadPosRankSum=1.272;VQSLOD=2.3675;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:11,0:10:2.90:22,3,0	0/0:33,0:2:5.45:0,5,28	0/0:27,0:7:14.41:0,14,186	./.	0/1:12,0:11:0.28:0,0,0	./.	./.	0/0:38,0:36:72.19:0,72,1273	1/1:44,0:38:42.22:335,42,0	./.	0/0:33,0:32:65.85:0,66,1136	0/0:36,1:34:42.12:0,42,1316	0/1:9,0:9:0:0,0,0	./.	./.	1/1:10,1:7:0.89:2,1,0	1/1:7,0:3:4.44:13,4,0	1/1:8,0:2:4.23:26,4,0	./.	./.	0/0:26,0:26:45.14:0,45,789	0/0:19,0:17:36.12:0,36,658	0/0:79,2:77:99:0,159,2872	./.	0/1:27,0:22:31.96:166,0,32	1/1:15,0:14:7.63:56,8,0	1/1:6,0:6:8.72:60,9,0
chr10	76599027	.	C	CTGTG	1466.53	PASS	AB=0.920;AC=20;AF=0.435;AN=46;BaseQRankSum=5.890;DP=761;FS=15.053;HRun=0;HaplotypeScore=125.2207;InbreedingCoeff=0.3835;MQ=33.65;MQ0=121;MQRankSum=-8.404;QD=5.07;ReadPosRankSum=-1.709;VQSLOD=1.4245;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:8,1:8:2.85:50,3,0	./.	0/0:27,0:7:5.54:0,6,45	0/1:13,2:10:0:0,0,0	1/1:9,0:8:1.25:3,1,0	0/0:19,2:10:0:0,0,0	./.	0/0:41,0:38:68.60:0,69,1184	1/1:38,4:31:10.38:737,10,0	./.	0/0:41,0:35:56.72:0,57,813	0/0:44,0:42:87.65:0,88,1208	0/0:9,6:7:0:0,0,0	1/1:22,1:17:0.47:1,0,0	0/1:15,1:13:0.67:32,0,1	0/1:23,1:16:37.17:37,0,52	0/1:20,0:9:4.81:5,0,155	0/0:40,0:3:5.88:0,6,48	0/1:13,4:17:0.04:0,0,0	1/1:43,0:26:2.39:13,2,0	0/0:29,0:29:28.19:0,28,741	0/0:25,0:20:39.13:0,39,619	0/0:78,0:71:99:0,108,1681	./.	0/1:42,1:30:31.16:559,0,31	1/1:14,1:12:5.48:75,5,0	1/1:2,0:3:5.81:87,6,0
chr10	76599041	.	GTC	G	477.48	PASS	AB=0.959;AC=18;AF=0.391;AN=46;BaseQRankSum=7.734;DP=835;FS=1.232;HRun=0;HaplotypeScore=121.8164;InbreedingCoeff=0.3517;MQ=32.58;MQ0=148;MQRankSum=-6.571;QD=1.47;ReadPosRankSum=-3.899;VQSLOD=1.3222;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:17:9.49:0,9,41	1/1:4,2:6:3.01:33,3,0	./.	0/0:19,0:5:5.85:0,6,46	./.	0/0:9,1:8:0.04:0,0,1	1/1:30,1:14:5.89:37,6,0	./.	0/0:52,0:45:75.01:0,75,1452	0/1:34,2:23:89.86:201,0,90	./.	0/0:44,0:37:63.53:0,64,1000	0/0:46,1:42:35.16:0,35,1279	0/1:18,0:10:0:0,0,0	1/1:22,2:15:2.04:6,2,0	0/0:16,0:12:2.96:0,3,19	0/1:36,1:23:34.51:35,0,124	0/1:22,0:12:13.70:14,0,184	0/0:45,0:4:8.87:0,9,90	0/1:20,2:15:0.14:0,0,0	1/1:65,1:34:5.73:40,6,0	0/0:38,0:36:17.26:0,17,876	0/0:25,0:19:41.31:0,41,639	0/0:84,1:72:99:0,112,1921	./.	0/1:39,4:28:99:142,0,234	1/1:13,1:12:9.17:54,9,0	1/1:4,1:4:7.24:59,7,0
chr10	76599069	.	C	CTG	208.19	PASS	AB=0.940;AC=11;AF=0.239;AN=46;BaseQRankSum=4.342;DP=866;FS=8.916;HRun=0;HaplotypeScore=121.1756;InbreedingCoeff=0.1497;MQ=31.82;MQ0=164;MQRankSum=-4.942;QD=1.06;ReadPosRankSum=-1.500;VQSLOD=1.5887;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:18:2.44:0,2,19	1/1:5,0:4:0.89:2,1,0	./.	./.	./.	0/0:5,1:5:0:0,0,0	0/0:37,1:17:9.48:0,9,95	0/0:44,0:1:2.99:0,3,24	0/0:62,0:47:61.28:0,61,1032	0/0:30,0:12:17.67:0,18,121	./.	0/0:58,0:46:81.62:0,82,1080	0/0:43,1:39:35.78:0,36,923	1/1:22,3:12:0.47:1,0,0	0/1:26,3:18:10.98:11,0,35	0/0:25,2:16:4.61:0,5,27	0/1:47,3:30:59.91:60,0,181	0/0:29,2:15:26.39:0,26,220	0/1:32,2:8:81.03:81,0,92	0/1:17,0:9:0:0,0,0	0/0:85,1:39:2.59:0,3,67	0/0:45,0:39:66.18:0,66,852	0/0:22,0:19:30.55:0,31,381	0/0:99,0:79:99:0,123,1602	./.	0/1:26,3:15:99:136,0,182	1/1:6,2:5:3:27,3,0	0/0:6,0:2:3.01:0,3,36
chr10	76599083	.	C	CTG	320.46	PASS	AB=0.973;AC=14;AF=0.304;AN=46;BaseQRankSum=4.568;DP=902;FS=4.508;HRun=0;HaplotypeScore=135.0407;InbreedingCoeff=0.0850;MQ=30.49;MQ0=162;MQRankSum=-6.797;QD=1.07;ReadPosRankSum=-1.579;VQSLOD=2.3551;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,1:20:2.57:0,3,41	1/1:7,0:5:1.45:4,1,0	./.	./.	./.	0/1:10,0:5:0:0,0,0	0/1:44,1:22:3.20:3,0,107	0/1:41,1:5:34.27:40,0,34	0/0:65,0:46:41.79:0,42,726	0/1:29,1:17:45.97:46,0,206	./.	0/0:58,0:47:90.77:0,91,1225	0/0:43,0:37:58.55:0,59,988	1/1:26,0:11:0.47:1,0,0	0/0:33,0:21:4.46:0,4,20	0/0:34,0:21:10.95:0,11,87	0/1:49,0:30:28.70:29,0,197	0/0:31,0:15:24.24:0,24,230	0/1:30,2:10:28.83:98,0,29	0/1:17,0:12:0:0,0,0	0/0:92,0:43:11.91:0,12,108	0/0:38,0:32:48.15:0,48,637	0/0:20,0:17:11.98:0,12,210	0/0:100,0:75:99:0,102,1345	./.	0/1:30,3:20:99:176,0,149	1/1:8,0:6:3.46:40,3,0	0/0:7,0:3:3.01:0,3,41
chr10	76599089	.	CTG	C	57.32	PASS	AB=0.989;AC=10;AF=0.217;AN=46;BaseQRankSum=4.827;DP=934;FS=17.983;HRun=0;HaplotypeScore=138.8605;InbreedingCoeff=0.1810;MQ=29.91;MQ0=172;MQRankSum=-6.325;QD=0.23;ReadPosRankSum=-3.688;VQSLOD=0.5203;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:19:3.40:0,3,54	0/1:7,0:4:0:0,0,0	./.	./.	./.	0/0:11,0:6:0.39:0,0,0	0/0:49,0:24:16.19:0,16,189	0/0:43,0:6:14.95:0,15,151	0/0:60,1:43:28.70:0,29,926	0/1:33,0:17:58.44:58,0,213	./.	0/0:59,2:50:99:0,101,1706	0/0:44,2:39:79.57:0,80,1323	0/1:25,0:11:0:0,0,0	0/1:32,2:22:0.16:0,0,35	0/1:33,1:21:12.16:12,0,124	0/1:52,0:32:3.56:4,0,361	0/0:30,2:15:24.08:0,24,330	0/0:31,0:9:21.86:0,22,232	0/1:17,0:12:0:0,0,0	0/0:96,1:42:13.25:0,13,135	0/0:37,1:30:45.15:0,45,798	0/0:18,0:15:21.04:0,21,299	0/0:98,4:76:96.27:0,96,1593	./.	0/1:36,0:23:64.94:65,0,412	1/1:8,0:6:2.05:20,2,0	0/0:7,0:3:3.01:0,3,53
chr10	76599095	.	GTC	G	385.10	PASS	AB=0.882;AC=14;AF=0.292;AN=48;BaseQRankSum=4.133;DP=982;FS=11.561;HRun=0;HaplotypeScore=147.6722;InbreedingCoeff=0.1762;MQ=29.39;MQ0=181;MQRankSum=-6.642;QD=1.31;ReadPosRankSum=-4.817;VQSLOD=-0.1223;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,1:18:2.29:0,2,53	0/1:7,0:4:0:0,0,0	./.	./.	./.	0/1:9,2:6:0.08:0,0,0	0/0:44,3:23:19.34:0,19,155	0/0:42,0:6:14.71:0,15,173	0/0:63,0:43:37.71:0,38,892	0/1:32,6:21:99:217,0,168	./.	0/0:64,0:50:99:0,101,1823	0/0:48,0:40:70.45:0,70,1171	1/1:25,2:13:2.57:11,3,0	0/1:31,6:25:0.17:0,0,26	0/1:31,4:22:32.76:33,0,91	0/1:51,2:32:3.26:3,0,291	0/0:35,1:18:24.47:0,24,358	0/0:32,1:11:1.09:0,1,206	1/1:11,6:13:0.47:1,0,0	0/0:102,2:46:4.21:0,4,77	0/0:40,0:32:48.15:0,48,890	0/0:22,0:17:15.01:0,15,221	0/0:100,2:77:99:0,102,1678	0/1:8,5:9:0:0,0,0	0/1:40,4:27:99:191,0,397	1/1:7,3:7:1.76:39,2,0	0/0:7,0:4:2.74:0,3,54
chr10	76599097	.	C	CTG	483.84	PASS	AB=0.969;AC=17;AF=0.354;AN=48;BaseQRankSum=4.565;DP=1002;FS=1.488;HRun=0;HaplotypeScore=153.8948;InbreedingCoeff=-0.1458;MQ=29.08;MQ0=181;MQRankSum=-6.338;QD=0.79;ReadPosRankSum=-3.258;VQSLOD=1.3700;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:17:2.62:0,3,18	0/0:9,0:6:0:0,0,0	./.	./.	./.	0/1:12,0:7:0.29:0,0,0	0/1:45,1:23:4.91:5,0,53	0/1:46,1:9:73.85:74,0,105	0/1:60,5:44:47.85:48,0,472	0/1:42,0:24:7.43:7,0,118	./.	0/0:62,0:49:79.13:0,79,1159	0/0:46,0:40:53.99:0,54,634	1/1:25,1:12:2.68:11,3,0	0/1:37,2:26:10.77:42,0,11	0/1:32,3:23:39.88:82,0,40	0/1:48,5:31:98.57:99,0,180	0/1:34,2:17:87.07:93,0,87	0/1:33,1:12:54.20:54,0,136	0/1:17,0:13:0:0,0,0	0/1:102,0:46:4.09:4,0,5	0/0:40,0:31:48.15:0,48,593	0/0:22,0:15:9.03:0,9,112	0/0:96,7:78:87.26:0,87,1077	0/0:15,0:11:1.82:0,2,5	0/1:45,0:28:52.10:52,0,250	1/1:12,0:9:2.34:39,2,0	0/0:7,0:4:3.01:0,3,38
chr10	76599109	.	GTC	G	118.25	PASS	AB=0.975;AC=15;AF=0.313;AN=48;BaseQRankSum=4.226;DP=1021;FS=2.679;HRun=0;HaplotypeScore=150.0889;InbreedingCoeff=-0.0940;MQ=28.47;MQ0=181;MQRankSum=-4.682;QD=0.24;ReadPosRankSum=-4.509;VQSLOD=1.1410;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:18:2.70:0,3,18	0/1:10,0:8:0.02:0,0,0	./.	./.	./.	0/1:14,0:7:0:0,0,0	0/1:42,0:22:18.74:19,0,60	0/1:46,0:14:40.98:41,0,264	0/0:62,1:44:56.72:0,57,801	0/1:44,1:28:31.72:32,0,274	./.	0/0:62,0:51:87.96:0,88,1700	0/0:42,0:32:56.06:0,56,876	0/1:25,0:12:0.11:0,0,0	0/1:40,1:25:16.92:17,0,24	0/1:41,0:27:20.46:20,0,100	0/0:48,2:30:1.29:0,1,251	0/0:42,0:19:7.96:0,8,249	0/1:34,2:14:38.83:39,0,289	1/1:14,0:12:0.47:1,0,0	0/1:99,5:48:2.51:6,0,3	0/0:45,0:33:51.14:0,51,882	0/0:24,0:16:9.03:0,9,170	0/0:105,2:79:90.86:0,91,1594	0/1:14,1:12:0:0,0,0	0/1:45,2:29:13.45:13,0,417	0/1:12,1:10:27.38:48,0,27	0/0:7,0:4:2.68:0,3,54
chr10	76599135	.	GTC	G	222.49	PASS	AB=0.951;AC=13;AF=0.271;AN=48;BaseQRankSum=6.012;DP=1021;FS=4.052;HRun=0;HaplotypeScore=156.1474;InbreedingCoeff=-0.2066;MQ=27.12;MQ0=199;MQRankSum=-5.025;QD=0.53;ReadPosRankSum=-0.756;VQSLOD=2.2862;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:17:1.61:0,2,6	0/0:8,1:8:2.91:0,3,38	./.	./.	./.	0/1:15,0:8:0:0,0,0	0/0:47,0:20:2.68:0,3,52	0/0:45,0:12:4.07:0,4,283	0/1:56,1:39:11.24:11,0,252	0/1:47,5:35:97.57:98,0,549	./.	0/0:63,1:53:67.02:0,67,995	0/0:43,0:32:42.97:0,43,717	0/1:27,2:15:16.75:17,0,28	0/0:45,1:29:6:0,6,75	0/1:46,3:33:48.21:48,0,53	0/1:40,1:24:15.88:16,0,236	0/1:33,3:18:64.60:65,0,105	0/1:40,0:12:46.84:47,0,60	1/1:16,0:12:0.47:1,0,0	0/0:77,0:32:2.54:0,3,38	0/0:52,0:32:26.67:0,27,436	0/0:21,0:13:3.01:0,3,56	0/0:98,1:75:81.11:0,81,1232	0/1:22,1:17:0:0,0,0	0/1:49,1:21:3.94:4,0,226	0/1:9,2:10:32.84:33,0,102	0/0:7,1:5:0.66:0,1,20
chr10	76599137	.	CTG	C	67.34	PASS	AB=0.963;AC=11;AF=0.229;AN=48;BaseQRankSum=4.589;DP=1026;FS=3.767;HRun=0;HaplotypeScore=160.7125;InbreedingCoeff=-0.1045;MQ=27.13;MQ0=199;MQRankSum=-2.880;QD=0.19;ReadPosRankSum=0.418;VQSLOD=2.8840;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,1:17:1.96:0,2,6	0/0:8,0:8:2.91:0,3,49	./.	./.	0/1:29,0:20:0.02:0,0,0	0/1:15,0:9:0.02:0,0,0	0/0:48,1:22:8.39:0,8,86	0/0:44,0:12:20.98:0,21,224	0/1:55,1:37:30.24:30,0,145	0/1:48,1:33:16.03:16,0,455	./.	0/0:60,4:53:48.38:0,48,693	0/0:42,1:32:44.85:0,45,695	0/1:24,6:16:28.63:29,0,56	0/0:42,4:28:5.37:0,5,58	0/1:48,3:35:26.70:41,0,27	0/0:39,0:24:24.66:0,25,275	0/0:36,0:18:2.87:0,3,144	0/1:38,0:11:15.47:15,0,79	1/1:17,0:12:0.47:1,0,0	0/0:73,0:30:3.44:0,3,21	0/0:53,0:33:21.07:0,21,329	0/0:22,0:13:3.01:0,3,50	0/0:98,1:75:69.64:0,70,1081	./.	0/1:51,0:21:22.84:23,0,161	0/1:11,1:11:27.97:28,0,110	0/0:8,0:5:2.84:0,3,14
chr10	76599141	.	GTGTGTGTGTC	G	548.36	PASS	AB=0.981;AC=17;AF=0.340;AN=50;BaseQRankSum=3.914;DP=1059;FS=0.000;HRun=0;HaplotypeScore=202.5379;InbreedingCoeff=-0.1667;MQ=27.00;MQ0=203;MQRankSum=-5.165;QD=0.90;ReadPosRankSum=-2.537;VQSLOD=2.4053;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:46,0:19:9.48:51,9,0	0/1:8,1:8:29.32:29,0,70	./.	./.	1/1:33,2:21:1.36:3,1,0	0/0:16,0:9:0.56:0,1,2	0/1:51,1:23:32.99:33,0,55	0/1:49,0:13:26.67:27,0,134	0/0:57,0:37:16.68:0,17,296	0/1:50,0:34:99:141,0,470	./.	0/0:64,0:52:30.39:0,30,797	0/0:42,0:31:46.49:0,46,913	0/1:30,0:16:3.94:4,0,88	0/0:47,1:29:4.44:0,4,80	0/1:55,0:39:15.84:16,0,55	0/1:38,0:24:34.31:34,0,235	0/1:36,0:18:75.01:75,0,155	0/1:40,0:12:8.17:52,0,8	0/0:16,0:11:0:0,0,0	0/1:77,0:32:0.19:0,0,24	0/0:53,0:34:23.66:0,24,414	0/0:23,0:14:3.01:0,3,74	0/0:101,0:76:72.05:0,72,1498	0/1:21,3:18:0:0,0,0	0/1:50,1:22:99:137,0,193	0/1:13,0:13:56.82:78,0,57	0/0:9,0:6:0.14:0,0,10
chr10	76599145	.	G	GTATC	64.83	PASS	AB=0.986;AC=6;AF=0.120;AN=50;BaseQRankSum=4.543;DP=1088;FS=1.495;HRun=0;HaplotypeScore=190.3617;InbreedingCoeff=0.2371;MQ=26.78;MQ0=213;MQRankSum=-3.277;QD=0.39;ReadPosRankSum=-1.236;VQSLOD=2.4403;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:19:6.49:0,6,18	0/0:10,0:8:4.26:0,4,63	./.	./.	0/0:37,0:22:0.87:0,1,2	0/1:16,0:9:0.16:1,0,0	0/0:56,0:25:12.64:0,13,137	0/0:58,0:16:32.97:0,33,452	0/0:56,2:36:33.15:0,33,425	0/0:49,0:32:75.86:0,76,1024	./.	0/0:61,0:50:54.77:0,55,988	0/0:42,0:32:52.36:0,52,947	0/0:31,0:17:8.87:0,9,108	0/0:47,0:28:9.43:0,9,113	0/1:53,2:39:50.40:50,0,186	0/0:38,0:22:26.85:0,27,437	0/0:36,0:18:10.22:0,10,295	0/0:43,0:12:11.21:0,11,160	0/1:20,0:13:0:0,0,0	0/0:82,0:35:7.03:0,7,77	0/0:55,0:36:27.54:0,28,490	0/0:24,0:13:3.01:0,3,60	0/0:98,0:75:78.09:0,78,1423	1/1:25,0:19:1.60:3,2,0	0/1:50,1:21:99:99,0,318	0/0:15,0:14:22.06:0,22,264	0/0:8,0:5:3.01:0,3,37
chr10	76599149	.	GTC	G	242.96	PASS	AB=0.996;AC=17;AF=0.340;AN=50;BaseQRankSum=5.371;DP=1070;FS=0.697;HRun=0;HaplotypeScore=171.0461;InbreedingCoeff=-0.2045;MQ=27.00;MQ0=208;MQRankSum=-6.971;QD=0.45;ReadPosRankSum=-1.423;VQSLOD=2.4681;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:20:1.54:0,2,6	0/1:12,0:10:10.64:11,0,51	./.	./.	1/1:34,3:22:0.33:1,0,0	0/1:16,0:9:0:1,0,0	0/1:59,0:28:3.18:3,0,69	0/1:49,0:12:41.31:41,0,89	0/1:52,0:35:29.75:30,0,185	0/1:47,0:30:58.37:58,0,345	./.	0/0:61,0:49:56.17:0,56,735	0/0:43,0:31:52.59:0,53,768	0/1:33,0:17:11.32:11,0,77	0/0:45,2:27:3.88:0,4,59	0/1:50,1:38:6.73:50,0,7	0/0:35,0:20:12.80:0,13,246	0/1:36,1:20:40.92:41,0,109	0/1:39,0:9:33.99:34,0,35	1/1:20,1:14:1.72:4,2,0	0/0:82,0:33:1.88:0,2,21	0/0:58,0:39:9.81:0,10,335	0/0:24,1:14:3.01:0,3,58	0/0:96,2:75:79.01:0,79,1203	0/1:25,0:19:0.17:0,0,0	0/1:49,0:20:36.21:36,0,106	0/1:15,0:14:47.21:47,0,78	0/0:8,0:5:1.26:0,1,16
chr10	76599155	.	G	GTC	285.18	PASS	AB=0.947;AC=14;AF=0.269;AN=52;BaseQRankSum=4.530;DP=1115;FS=0.858;HRun=0;HaplotypeScore=196.4738;InbreedingCoeff=-0.0599;MQ=27.40;MQ0=212;MQRankSum=-3.079;QD=0.55;ReadPosRankSum=-0.467;VQSLOD=2.3602;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,1:20:5.11:0,5,23	0/0:15,1:15:4.22:0,4,49	./.	./.	0/0:41,0:26:6.26:0,6,36	0/1:16,2:11:0.02:0,0,0	0/1:60,0:30:21.58:22,0,68	0/0:54,0:10:20.77:0,21,163	0/0:53,0:34:21.28:0,21,337	0/1:48,1:28:2.84:3,0,444	0/0:24,0:18:0:0,0,0	0/0:60,0:48:58.44:0,58,731	0/0:48,0:36:61.45:0,61,786	0/0:32,2:19:8.85:0,9,132	0/1:46,3:30:16.74:17,0,40	0/1:43,6:40:17.87:49,0,18	0/1:33,2:20:99:111,0,108	0/1:37,0:21:8.88:9,0,128	0/1:41,0:11:20.89:21,0,37	1/1:20,2:15:2.79:26,3,0	1/1:74,4:34:1.92:22,2,0	0/0:57,1:39:30.03:0,30,373	0/0:28,0:17:8.04:0,8,92	0/0:96,0:74:75.62:0,76,1031	0/0:29,0:23:0.76:0,1,14	0/1:50,0:19:18.16:18,0,146	0/1:15,1:14:69.57:123,0,70	0/0:7,1:5:5.97:0,6,47
chr10	76599161	.	GTC	G	754.74	PASS	AB=0.966;AC=24;AF=0.462;AN=52;BaseQRankSum=6.880;DP=1081;FS=9.064;HRun=0;HaplotypeScore=180.4493;InbreedingCoeff=-0.0312;MQ=27.62;MQ0=206;MQRankSum=-6.959;QD=1.10;ReadPosRankSum=-5.029;VQSLOD=0.1695;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:45,0:19:4.42:47,4,0	0/1:18,0:16:26.10:63,0,26	./.	./.	1/1:39,3:26:11:66,11,0	1/1:17,0:10:5.88:36,6,0	0/1:53,1:25:47.16:47,0,54	0/0:53,0:8:14.62:0,15,96	0/0:53,1:33:11.22:0,11,366	0/1:41,2:26:67.84:68,0,374	0/1:24,0:17:0:0,0,0	0/0:64,1:52:49.18:0,49,767	0/0:45,1:34:52.88:0,53,814	0/1:36,1:23:43.38:43,0,46	0/1:49,1:30:18.46:69,0,18	0/1:46,2:38:15.34:71,0,15	0/1:34,2:20:22.44:22,0,114	0/1:34,2:17:67.32:67,0,92	0/1:37,0:10:33.03:33,0,49	1/1:25,0:16:6.83:38,7,0	1/1:77,0:33:1.41:15,1,0	0/0:53,1:35:23.26:0,23,334	0/0:29,0:19:15.44:0,15,166	0/0:87,2:67:73.04:0,73,1102	1/1:14,16:23:2.74:18,3,0	0/1:47,2:20:90.90:91,0,117	0/1:14,2:13:52.22:119,0,52	0/0:7,0:5:2.27:0,2,10
chr10	76599163	.	C	CTG	1018.07	PASS	AB=1.000;AC=27;AF=0.519;AN=52;BaseQRankSum=6.317;DP=1092;FS=1.213;HRun=0;HaplotypeScore=191.8152;InbreedingCoeff=-0.0249;MQ=27.70;MQ0=206;MQRankSum=-5.036;QD=1.32;ReadPosRankSum=-4.716;VQSLOD=0.8106;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:48,0:21:7.79:40,0,8	0/1:19,0:17:24.13:93,0,24	./.	./.	1/1:40,0:25:4.34:33,4,0	1/1:17,0:11:8.83:54,9,0	0/1:50,0:26:22.88:52,0,23	0/1:56,0:10:24.21:24,0,112	0/0:50,0:32:34.45:0,34,352	0/1:46,0:27:40.83:41,0,210	1/1:25,0:18:2.91:17,3,0	0/0:61,0:50:47.21:0,47,582	0/0:44,0:32:44.97:0,45,539	0/1:38,0:24:50.81:51,0,62	0/1:52,0:32:1.84:129,0,2	1/1:47,3:38:20.85:141,21,0	0/1:38,0:23:31.63:62,0,32	0/1:35,0:17:66.97:106,0,67	0/1:37,0:10:22.48:22,0,46	1/1:31,0:21:11.84:101,12,0	1/1:78,0:35:5.87:65,6,0	0/0:51,0:34:20.84:0,21,235	0/0:28,0:19:11.06:0,11,133	0/0:87,1:67:58.10:0,58,698	1/1:30,0:23:1.55:4,2,0	0/1:50,0:19:48.79:49,0,84	0/1:15,0:12:39.42:96,0,39	0/1:7,0:5:1.98:2,0,3
chr10	76600159	.	CGG	C	3795.25	PASS	AB=1.000;AC=41;AF=0.759;AN=54;BaseQRankSum=7.723;DP=339;FS=3.060;HRun=3;HaplotypeScore=43.9891;InbreedingCoeff=0.7864;MQ=45.40;MQ0=27;MQRankSum=-4.309;QD=14.38;ReadPosRankSum=1.401;VQSLOD=0.9176;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:20,2:21:9.03:115,9,0	1/1:7,0:7:6.02:77,6,0	0/1:5,0:1:0:0,0,0	./.	1/1:15,0:15:12.47:131,12,0	1/1:12,1:13:6.02:77,6,0	1/1:4,3:6:9.03:112,9,0	1/1:2,12:14:35.44:480,35,0	0/0:11,0:10:24.06:0,24,351	1/1:13,3:15:27.09:373,27,0	1/1:16,0:13:12.03:142,12,0	0/0:13,0:13:30.09:0,30,440	0/0:7,0:7:21.07:0,21,304	1/1:4,7:8:6.02:77,6,0	1/1:5,1:6:6.02:77,6,0	1/1:7,3:9:15.05:192,15,0	1/1:11,6:16:26.68:353,27,0	1/1:5,10:11:6.02:80,6,0	1/1:3,10:10:26.92:347,27,0	1/1:10,5:15:27.05:329,27,0	1/1:5,12:16:9.03:110,9,0	0/0:15,0:14:30.05:0,30,407	0/0:16,0:15:45.13:0,45,645	0/0:10,0:9:18.53:0,19,282	1/1:4,0:3:3.01:38,3,0	1/1:11,1:12:24.08:311,24,0	1/1:3,15:18:22.37:253,22,0	1/1:8,2:6:9.03:120,9,0
chr10	76600160	.	GGGAAAAA	G	4192.56	PASS	AC=40;AF=0.741;AN=54;BaseQRankSum=8.319;DP=324;FS=10.720;HRun=0;HaplotypeScore=58.3886;InbreedingCoeff=0.7453;MQ=45.04;MQ0=28;MQRankSum=-1.898;QD=17.62;ReadPosRankSum=4.767;VQSLOD=0.9896;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:20:8.95:94,9,0	1/1:0,0:7:6.02:110,6,0	0/0:9,0:2:0:0,0,0	./.	1/1:2,0:15:9.73:126,10,0	1/1:1,11:12:6.02:77,6,0	1/1:4,0:3:9.03:112,9,0	1/1:13,0:13:33.43:460,33,0	0/0:12,0:11:30.09:0,30,611	1/1:4,0:11:27.09:439,27,0	1/1:2,13:12:12.03:142,12,0	0/0:13,0:13:36.09:0,36,695	0/0:7,0:7:21.07:0,21,430	1/1:10,0:7:6.02:109,6,0	1/1:1,0:4:6.02:109,6,0	1/1:4,0:8:15:290,15,0	1/1:14,2:15:25.13:372,25,0	1/1:14,0:10:6.02:113,6,0	1/1:13,0:10:26.95:348,27,0	1/1:5,1:14:4.34:319,4,0	1/1:14,0:13:7.18:107,7,0	0/0:15,0:14:41.47:0,41,768	0/0:17,0:16:48.14:0,48,745	0/0:9,0:8:18.53:0,19,435	1/1:1,0:3:3.01:71,3,0	1/1:2,10:12:21.85:336,22,0	1/1:16,1:18:13.68:309,14,0	1/1:10,0:6:5.63:148,6,0
chr10	76600517	.	C	CGT	622.66	PASS	AB=0.864;AC=16;AF=0.308;AN=52;BaseQRankSum=-3.916;DP=557;FS=3.167;HRun=0;HaplotypeScore=99.2680;InbreedingCoeff=0.0966;MQ=62.79;MQ0=18;MQRankSum=0.970;QD=2.47;ReadPosRankSum=-1.207;VQSLOD=1.4019;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,10:36:10.66:39,0,11	1/1:6,4:10:6.02:88,6,0	./.	0/1:24,0:15:0:0,0,0	0/0:12,0:22:2.60:0,3,10	0/1:8,3:12:34.88:35,0,54	0/1:24,1:29:40.33:73,0,40	1/1:18,0:18:2.92:17,3,0	0/0:13,0:17:8.43:0,8,40	0/1:16,2:18:25.89:38,0,26	0/1:20,2:22:40.10:73,0,40	0/0:14,0:17:11.32:0,11,55	0/0:6,0:6:2.63:0,3,14	0/1:16,0:16:29.79:56,0,30	1/1:15,0:15:11.98:97,12,0	0/1:12,7:20:18.59:122,0,19	1/1:12,11:27:2.35:127,2,0	0/0:8,0:18:13.30:0,13,70	0/0:18,0:18:5.81:0,6,34	0/0:12,0:23:14.20:0,14,70	0/0:39,0:36:5.48:0,5,30	0/0:9,0:9:0.47:0,0,1	./.	0/0:22,0:38:19.84:0,20,97	0/0:13,0:19:5.68:0,6,28	0/0:17,0:17:4.21:0,4,18	0/0:13,0:22:5.02:0,5,27	0/0:5,0:5:0:0,0,0
chr10	76601633	.	TA	T	426.92	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.359;DP=536;FS=0.000;HRun=9;HaplotypeScore=52.2172;InbreedingCoeff=0.9047;MQ=76.56;MQ0=2;MQRankSum=-0.032;QD=16.42;ReadPosRankSum=0.766;VQSLOD=3.4517;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:26:57.03:522,57,0	0/0:8,0:8:21.06:0,21,242	0/0:25,0:18:11.95:0,12,130	0/0:17,0:12:14.69:0,15,123	0/0:7,0:7:15.04:0,15,173	0/0:26,0:26:69.21:0,69,796	0/0:18,0:18:48.14:0,48,554	0/0:28,0:28:63.19:0,63,727	0/0:19,0:19:57.17:0,57,658	0/0:20,0:20:51.15:0,51,589	0/0:15,0:15:42.12:0,42,485	0/0:16,0:16:42.12:0,42,485	0/0:12,0:12:33.10:0,33,381	0/0:18,0:18:21.47:0,21,490	0/0:20,0:20:51.15:0,51,589	0/0:30,0:30:84.25:0,84,969	0/0:18,0:18:45.13:0,45,519	0/0:23,0:23:63.19:0,63,727	0/0:30,0:30:75.21:0,75,857	0/0:25,0:25:51.15:0,51,589	0/0:10,0:10:24.06:0,24,268	0/0:21,0:21:63.18:0,63,717	0/0:21,0:21:57.17:0,57,658	0/0:28,0:28:78.22:0,78,890	0/0:14,0:14:39.12:0,39,450	0/0:18,0:18:45.13:0,45,512	0/0:18,0:18:48.14:0,48,552	0/0:4,0:4:12.04:0,12,138
chr10	76602161	.	T	TACAC	2514.64	PASS	AB=0.859;AC=36;AF=0.720;AN=50;BaseQRankSum=-0.249;DP=561;FS=0.982;HRun=0;HaplotypeScore=116.3603;InbreedingCoeff=0.5144;MQ=69.83;MQ0=14;MQRankSum=-0.405;QD=6.72;ReadPosRankSum=-1.431;VQSLOD=2.5941;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:38:23.52:206,24,0	1/1:8,0:8:2.85:51,3,0	./.	./.	0/1:13,3:17:40.01:64,0,40	1/1:24,0:23:5.63:94,6,0	1/1:16,0:16:6.02:117,6,0	1/1:22,0:19:17.91:170,18,0	0/0:16,0:18:9.01:0,9,120	1/1:17,0:16:12.04:192,12,0	./.	0/0:6,0:6:3.48:0,3,46	0/1:8,0:10:3.51:4,0,38	1/1:10,0:10:2.85:43,3,0	1/1:21,0:21:14.70:213,15,0	1/1:16,5:21:2.50:26,3,0	1/1:21,0:32:10.36:104,10,0	1/1:11,0:11:18.03:282,18,0	1/1:18,0:17:15.93:263,16,0	1/1:12,4:18:3.01:70,3,0	1/1:49,0:48:15.05:295,15,0	0/0:16,0:16:9.01:0,9,117	0/0:16,0:15:6:0,6,70	0/0:36,0:38:27.05:0,27,353	0/0:9,0:9:2.75:0,3,20	1/1:13,4:16:15.51:269,16,0	1/1:16,0:15:12.02:170,12,0	1/1:5,0:5:3.48:41,3,0
chr10	76602717	.	T	TA	1087.46	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.256;DP=513;FS=4.099;HRun=9;HaplotypeScore=81.0430;InbreedingCoeff=0.9670;MQ=62.11;MQ0=9;MQRankSum=0.772;QD=24.71;ReadPosRankSum=1.682;VQSLOD=4.4690;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:74.92:0,75,641	0/0:7,0:7:20.97:0,21,177	0/0:13,0:11:32.98:0,33,282	0/0:9,0:6:11.52:0,12,77	1/1:5,22:27:69.12:744,69,0	0/0:18,0:17:35.99:0,36,313	0/0:15,0:15:35.56:0,36,285	0/0:34,0:33:85.99:0,86,732	0/0:15,0:16:38.01:0,38,318	0/0:14,0:14:32.97:0,33,281	0/0:20,0:20:53.89:0,54,452	0/0:15,0:15:41.95:0,42,358	0/0:12,0:12:32.99:0,33,286	0/0:17,0:16:32.91:0,33,277	0/0:18,0:18:41.99:0,42,365	0/0:25,0:24:65.91:0,66,563	0/0:20,1:20:53.97:0,54,465	0/0:24,0:22:56.99:0,57,495	0/0:30,0:30:61.10:0,61,494	0/0:19,0:19:53.88:0,54,449	0/0:24,0:24:56.96:0,57,492	0/0:6,0:5:14.89:0,15,118	0/0:8,0:8:17.98:0,18,153	0/0:14,0:14:32.99:0,33,286	1/1:2,15:17:42.11:465,42,0	0/0:20,0:20:50.99:0,51,443	0/0:23,0:22:62.90:0,63,535	0/0:11,0:11:26.99:0,27,234
chr10	76605499	.	TG	T	18837.35	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=18.489;DP=802;FS=7.696;HRun=1;HaplotypeScore=129.9911;InbreedingCoeff=0.9999;MQ=81.28;MQ0=0;MQRankSum=-3.484;QD=33.40;ReadPosRankSum=1.627;VQSLOD=3.9244;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,51:51:99:1770,144,0	1/1:0,20:20:51.16:649,51,0	0/0:22,0:22:60.10:0,60,870	0/0:20,0:20:29.90:0,30,672	1/1:0,24:24:68.86:850,69,0	1/1:0,20:20:60.19:732,60,0	1/1:0,27:27:72.23:888,72,0	1/1:2,33:35:97.50:1146,97,0	0/0:26,0:26:78.27:0,78,1245	1/1:0,35:35:99:1246,102,0	1/1:1,20:21:41.62:517,42,0	0/0:38,0:38:99:0,114,1820	0/0:35,0:35:99:0,105,1672	1/1:1,24:25:58.06:701,58,0	1/1:0,31:31:90.27:1089,90,0	1/1:3,28:31:90.73:1071,91,0	1/1:1,40:41:99:1358,112,0	1/1:0,15:15:45.14:557,45,0	1/1:0,20:20:60.14:693,60,0	1/1:0,34:34:96.30:1177,96,0	1/1:0,33:33:90.28:1102,90,0	0/0:43,0:43:99:0,129,2017	0/0:21,0:21:63.21:0,63,1000	0/0:33,0:33:99:0,99,1580	1/1:1,26:27:63.67:779,64,0	1/1:1,28:29:84.26:1029,84,0	1/1:0,28:28:81.25:1001,81,0	1/1:0,17:17:39.12:484,39,0
chr10	76605894	.	T	TCTC	28244.58	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=4.561;DP=662;FS=5.559;HRun=0;HaplotypeScore=105.9334;InbreedingCoeff=0.9992;MQ=78.82;MQ0=0;MQRankSum=-5.480;QD=60.09;ReadPosRankSum=-0.749;VQSLOD=5.7812;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,43:46:99:2695,117,0	1/1:0,7:7:21.07:466,21,0	0/0:23,0:23:59.94:0,60,929	0/0:22,0:22:42.14:0,42,689	1/1:4,24:30:69.19:1504,69,0	1/1:1,18:19:48.16:1097,48,0	1/1:2,23:28:66.23:1493,66,0	1/1:7,24:33:90.28:1946,90,0	0/0:23,0:23:66.23:0,66,1114	1/1:1,22:27:81.25:1769,81,0	1/1:1,13:14:36.12:799,36,0	0/0:29,0:29:78.27:0,78,1330	0/0:18,0:18:51.17:0,51,869	1/1:2,23:25:72.25:1650,72,0	1/1:1,22:23:63.22:1408,63,0	1/1:3,19:24:57.20:1299,57,0	1/1:1,18:20:51.18:1175,51,0	1/1:0,16:16:45.15:1022,45,0	1/1:4,13:17:29.11:996,29,0	1/1:4,14:18:51.16:1082,51,0	1/1:1,25:27:72.25:1631,72,0	0/0:26,0:26:78.25:0,78,1303	0/0:26,0:26:78.27:0,78,1330	0/0:25,0:25:72.23:0,72,1202	1/1:1,17:19:54.19:1229,54,0	1/1:3,30:34:99:2127,99,0	1/1:0,22:21:63.22:1423,63,0	1/1:0,21:21:63.22:1434,63,0
chr10	76607726	.	ATTTTTCT	A	1016.12	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.648;DP=631;FS=6.514;HRun=0;HaplotypeScore=136.2846;InbreedingCoeff=0.9712;MQ=69.91;MQ0=1;MQRankSum=-6.780;QD=20.74;ReadPosRankSum=0.493;VQSLOD=2.9271;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,37:47:51.13:1111,51,0	0/0:15,0:15:30.10:0,30,1039	0/0:14,0:12:15.03:0,15,295	0/0:18,0:16:18.05:0,18,421	0/0:25,0:25:63.20:0,63,2112	0/0:23,0:23:42.14:0,42,1423	0/0:21,0:21:42.14:0,42,1530	0/0:30,0:30:45.15:0,45,1442	0/0:17,0:17:42.14:0,42,1448	0/0:28,0:28:66.20:0,66,2243	0/0:26,0:26:54.18:0,54,1900	0/0:16,0:16:42.14:0,42,1429	0/0:23,0:23:48.16:0,48,1712	0/0:21,0:21:42.14:0,42,1553	0/0:24,0:24:51.17:0,51,1783	0/0:22,0:22:57.20:0,57,2045	0/0:27,0:27:72.25:0,72,2512	0/0:34,0:34:87.26:0,87,2947	0/0:27,0:27:42.14:0,42,1444	0/0:15,0:15:24.06:0,24,763	0/0:13,0:13:30.10:0,30,1022	0/0:12,0:12:24.08:0,24,788	0/0:15,0:15:39.13:0,39,1440	0/0:27,0:27:63.19:0,63,2235	0/0:26,0:26:66.23:0,66,2348	0/0:26,0:26:57.19:0,57,1969	0/0:26,0:26:66.22:0,66,2367	0/0:11,0:11:30.10:0,30,1111
chr10	76612928	.	T	TG	1009.14	PASS	AB=0.875;AC=5;AF=0.089;AN=56;BaseQRankSum=-4.268;DP=694;FS=0.000;HRun=6;HaplotypeScore=77.9822;InbreedingCoeff=0.7625;MQ=86.57;MQ0=0;MQRankSum=-3.271;QD=24.61;ReadPosRankSum=1.013;VQSLOD=3.4155;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.20:0,87,886	0/1:6,1:7:19.66:20,0,135	0/0:35,0:35:68.72:0,69,778	0/0:46,0:43:84.89:0,85,770	1/1:5,14:20:53.97:628,54,0	0/0:13,0:13:39.08:0,39,391	0/0:22,0:22:60.11:0,60,605	0/0:24,0:24:47.29:0,47,457	0/0:22,0:22:63.14:0,63,643	0/0:33,0:33:93.20:0,93,944	0/0:15,0:15:42.09:0,42,428	0/0:32,0:33:95.23:0,95,947	0/0:42,0:42:99:0,126,1278	0/0:21,0:21:57.11:0,57,571	0/0:42,0:42:99:0,114,1155	0/0:29,0:29:81.17:0,81,819	0/0:34,0:34:90.20:0,90,917	0/0:22,0:22:54.12:0,54,550	0/0:16,0:16:39.08:0,39,398	0/0:16,0:16:42.09:0,42,428	0/0:34,0:34:90.20:0,90,918	0/0:18,0:18:48.11:0,48,487	0/0:20,0:20:51.11:0,51,520	0/0:26,0:26:60.13:0,60,612	1/1:1,13:14:39.12:491,39,0	0/0:26,0:26:75.11:0,75,742	0/0:29,0:29:84.18:0,84,856	0/0:4,0:4:9.02:0,9,92
chr10	76613489	.	TA	T	568.42	PASS	AB=0.933;AC=5;AF=0.089;AN=56;BaseQRankSum=5.153;DP=328;FS=0.833;HRun=9;HaplotypeScore=34.6901;InbreedingCoeff=0.6608;MQ=65.11;MQ0=2;MQRankSum=2.559;QD=13.86;ReadPosRankSum=-0.155;VQSLOD=2.5283;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:51.11:0,51,566	0/0:3,0:3:9.01:0,9,93	0/1:13,1:8:7.37:7,0,87	0/0:10,0:5:4.61:0,5,53	1/1:0,15:15:45.02:412,45,0	0/0:10,0:10:27.01:0,27,295	0/0:7,0:7:21.06:0,21,241	0/0:20,0:20:60.17:0,60,682	0/0:4,0:4:6.02:0,6,69	0/0:14,0:14:30.09:0,30,346	0/0:10,0:11:29.85:0,30,309	0/0:5,0:5:15.03:0,15,162	0/0:11,0:11:33.10:0,33,381	0/0:8,0:8:20.98:0,21,215	0/0:12,0:11:33.10:0,33,381	0/0:7,0:7:18.05:0,18,208	0/0:36,0:33:96.23:0,96,1080	0/0:25,0:24:66.09:0,66,730	0/0:12,0:12:27.07:0,27,304	0/0:11,0:11:24.07:0,24,277	0/0:3,0:3:9.01:0,9,95	0/0:4,0:4:12.02:0,12,128	0/0:4,0:4:12.04:0,12,138	0/0:6,0:6:15.04:0,15,173	1/1:1,11:12:30.02:275,30,0	0/0:12,0:12:27.04:0,27,290	0/0:14,0:14:32.87:0,33,357	0/0:18,0:18:51.08:0,51,554
chr10	76613591	.	TCTCGAA	T	1445.87	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.169;DP=544;FS=27.029;HRun=0;HaplotypeScore=110.6826;InbreedingCoeff=0.9193;MQ=82.63;MQ0=0;MQRankSum=-7.830;QD=55.61;ReadPosRankSum=0.353;VQSLOD=1.7490;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:46:99:0,141,5003	0/0:2,0:2:6.02:0,6,219	0/0:15,0:15:45.15:0,45,1400	0/0:17,0:17:48.15:0,48,1409	1/1:0,13:13:33.07:756,33,0	0/0:14,0:13:36.12:0,36,1317	0/0:24,0:24:72.25:0,72,2519	0/0:23,0:23:66.22:0,66,2272	0/0:16,0:16:48.16:0,48,1677	0/0:14,0:14:39.13:0,39,1362	0/0:16,0:16:39.13:0,39,1300	0/0:22,0:22:66.23:0,66,2405	0/0:15,0:14:42.14:0,42,1527	0/0:7,0:7:21.07:0,21,768	0/0:13,0:13:39.13:0,39,1375	0/0:19,0:18:54.19:0,54,1973	0/0:32,0:32:96.33:0,96,3228	0/0:29,0:29:84.24:0,84,2655	0/0:13,0:13:36.12:0,36,1316	0/0:22,0:22:63.22:0,63,2266	0/0:53,0:53:99:0,160,5759	0/0:11,0:11:33.10:0,33,1120	0/0:12,0:12:33.11:0,33,1207	0/0:30,0:30:90.31:0,90,3125	1/1:1,12:13:33.11:812,33,0	0/0:30,0:30:90.31:0,90,3286	0/0:17,0:17:51.18:0,51,1758	0/0:3,0:3:9.03:0,9,312
chr10	76614686	.	C	CTAGGGTTGAAGGTGAGAACCAGCTCT	2618.92	PASS	AB=0.712;AC=26;AF=0.929;AN=28;BaseQRankSum=-2.198;DP=52;FS=10.375;HRun=0;HaplotypeScore=37.3957;InbreedingCoeff=-0.2181;MQ=153.66;MQ0=0;MQRankSum=-1.164;QD=62.36;ReadPosRankSum=-1.293;VQSLOD=0.5293;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:2.99:23,3,0	1/1:2,0:2:5.98:114,6,0	0/1:5,1:11:45.52:1308,0,46	0/1:5,0:7:7.62:618,0,8	./.	./.	1/1:1,0:1:2.99:24,3,0	./.	1/1:2,0:2:6.01:117,6,0	1/1:2,0:2:6.02:117,6,0	1/1:1,0:1:3:25,3,0	./.	./.	./.	./.	1/1:0,0:1:3.01:94,3,0	1/1:3,0:3:6.01:69,6,0	./.	./.	./.	1/1:5,0:5:9:96,9,0	./.	1/1:1,0:1:3:25,3,0	1/1:1,0:1:3.01:50,3,0	./.	./.	1/1:2,0:2:3:25,3,0	./.
chr10	76615724	.	T	TA	12984.10	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=7.858;DP=517;FS=5.825;HRun=6;HaplotypeScore=76.2406;InbreedingCoeff=0.9727;MQ=84.47;MQ0=0;MQRankSum=-4.440;QD=32.46;ReadPosRankSum=2.552;VQSLOD=5.2315;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,39:43:99:1321,105,0	1/1:0,6:6:15.05:189,15,0	0/0:18,0:18:45.06:0,45,438	0/0:13,0:13:33.07:0,33,336	1/1:0,15:15:45.06:530,45,0	1/1:1,20:21:57.18:717,57,0	1/1:3,14:17:39.12:491,39,0	1/1:3,24:27:72.23:906,72,0	0/0:24,0:24:60.11:0,60,605	1/1:1,19:20:57.18:717,57,0	1/1:2,14:16:39.12:490,39,0	0/0:14,0:14:39.07:0,39,391	0/0:19,0:19:51.10:0,51,513	1/1:0,17:17:51.16:642,51,0	1/1:1,28:29:69.22:868,69,0	1/1:0,24:24:69.22:868,69,0	1/1:1,14:15:11.95:391,12,0	1/1:5,13:18:39.12:491,39,0	1/1:2,17:19:48.14:590,48,0	1/1:0,8:8:18.02:208,18,0	1/1:0,28:28:81.26:1019,81,0	0/0:2,0:2:6.01:0,6,61	0/0:10,0:10:30.07:0,30,306	0/0:17,0:17:45.06:0,45,448	1/1:2,11:13:33.11:415,33,0	1/1:3,22:25:63.17:776,63,0	1/1:1,28:29:81.26:1019,81,0	1/1:1,9:10:27.09:336,27,0
chr10	76626986	.	GA	G	391.65	PASS	AB=0.905;AC=3;AF=0.054;AN=56;BaseQRankSum=7.760;DP=609;FS=0.788;HRun=10;HaplotypeScore=67.7072;InbreedingCoeff=0.6413;MQ=76.14;MQ0=0;MQRankSum=-1.235;QD=9.79;ReadPosRankSum=0.663;VQSLOD=2.5301;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:63.14:0,63,680	0/0:7,0:7:21.06:0,21,232	0/1:17,2:19:29.21:29,0,131	0/0:14,0:14:17.51:0,18,161	0/0:26,0:26:72.19:0,72,796	0/0:35,0:35:97.78:0,98,1036	0/0:22,0:22:63.13:0,63,678	0/0:32,0:32:69.18:0,69,756	0/0:21,1:22:31.07:0,31,555	0/0:32,0:32:78.19:0,78,848	0/0:18,0:18:42.11:0,42,457	0/0:19,0:19:57.15:0,57,631	0/0:29,0:29:81.18:0,81,877	0/0:30,0:30:81.22:0,81,894	0/0:21,0:21:54.12:0,54,575	0/0:22,0:22:63.16:0,63,688	0/0:21,0:22:56.99:0,57,612	1/1:3,18:21:53.98:469,54,0	0/0:25,0:25:60.15:0,60,650	0/0:21,0:21:60.13:0,60,645	0/0:16,0:16:45.11:0,45,490	0/0:17,0:17:36.10:0,36,398	0/0:17,0:17:45.11:0,45,490	0/0:9,0:8:27.07:0,27,299	0/0:22,0:23:60:0,60,645	0/0:25,0:25:69.19:0,69,763	0/0:22,0:22:60.13:0,60,644	0/0:16,0:16:48.12:0,48,524
chr10	76629252	.	T	TCC	1811.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.402;DP=521;FS=3.260;HRun=1;HaplotypeScore=60.4469;InbreedingCoeff=0.8484;MQ=94.73;MQ0=1;MQRankSum=-3.226;QD=48.97;ReadPosRankSum=1.872;VQSLOD=3.7545;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.18:0,69,989	0/0:9,0:9:27.07:0,27,391	0/0:18,0:18:51.14:0,51,705	0/0:29,0:29:78.06:0,78,1039	0/0:8,0:8:21.06:0,21,300	0/0:19,0:19:51.14:0,51,736	0/0:34,0:34:99:0,99,1430	0/0:16,0:16:45.14:0,45,653	0/0:16,0:16:45.14:0,45,668	0/0:13,0:13:33.11:0,33,488	0/0:4,0:4:9.03:0,9,138	0/0:20,0:20:60.17:0,60,867	0/0:19,0:19:57.18:0,57,851	0/0:33,0:33:93.30:0,93,1399	0/0:23,0:23:69.22:0,69,1035	0/0:12,0:12:33.10:0,33,484	0/0:32,0:32:90.28:0,90,1352	1/1:0,37:36:99:1907,99,0	0/0:22,0:22:57.16:0,57,810	0/0:13,0:13:36.08:0,36,482	0/0:34,0:34:99:0,99,1448	0/0:2,0:2:6.02:0,6,92	0/0:9,0:9:27.07:0,27,390	0/0:30,0:30:90.28:0,90,1335	0/0:7,0:7:21.07:0,21,321	0/0:13,0:13:36.10:0,36,510	0/0:15,0:15:45.10:0,45,621	0/0:8,0:8:21.03:0,21,275
chr10	76629528	.	G	GTGTG	91.92	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=0.918;DP=204;FS=4.968;HRun=0;HaplotypeScore=49.6489;InbreedingCoeff=0.3561;MQ=88.13;MQ0=1;MQRankSum=-2.408;QD=6.13;ReadPosRankSum=0.524;VQSLOD=0.7752;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,4:15:14.86:179,15,0	0/0:2,0:2:3.01:0,3,38	0/0:20,0:12:21.02:0,21,240	0/0:11,0:9:17.92:0,18,199	0/0:3,0:3:6.02:0,6,79	0/0:7,0:7:18.05:0,18,230	0/0:20,0:20:41.64:0,42,508	0/0:10,0:11:11.72:0,12,146	0/0:8,0:8:23.22:0,23,224	0/0:4,0:4:3.01:0,3,45	0/0:1,0:1:3.01:0,3,44	0/0:7,0:7:17.97:0,18,227	0/0:7,0:7:19.11:0,19,204	0/0:10,0:10:30.10:0,30,437	0/0:4,0:4:9.27:0,9,65	0/0:5,0:5:12.04:0,12,182	0/0:13,0:13:27.97:0,28,244	0/0:12,0:12:33.42:0,33,363	0/0:5,0:5:8.81:0,9,86	./.	0/0:4,0:5:6.02:0,6,87	./.	0/0:3,0:3:3:0,3,41	0/0:7,0:8:11.40:0,11,124	0/0:5,0:5:15.04:0,15,193	0/0:1,0:1:3.01:0,3,46	0/0:10,0:11:11.95:0,12,133	0/0:4,0:4:11.52:0,12,122
chr10	76629949	.	T	TAAATCATTTTCCATTGTGGG	1918.85	PASS	AB=0.750;AC=25;AF=0.962;AN=26;BaseQRankSum=-1.300;DP=33;FS=0.000;HRun=0;HaplotypeScore=28.9589;InbreedingCoeff=-0.1867;MQ=145.56;MQ0=0;MQRankSum=-1.156;QD=68.53;ReadPosRankSum=-0.867;VQSLOD=2.4317;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,0:2:6.02:135,6,0	1/1:2,1:4:9.03:505,9,0	0/1:4,0:6:9.41:698,0,9	1/1:1,0:1:3.01:45,3,0	./.	./.	1/1:3,0:3:9.03:176,9,0	1/1:1,0:1:2.99:24,3,0	./.	./.	1/1:3,0:3:3.01:78,3,0	./.	1/1:1,0:1:3.01:119,3,0	./.	1/1:1,0:1:3.01:52,3,0	./.	./.	1/1:3,0:3:6:68,6,0	1/1:1,0:1:3.01:52,3,0	1/1:1,0:1:2.97:20,3,0	1/1:1,0:1:3:25,3,0	./.	./.	./.	./.	./.	./.
chr10	76630568	.	A	ACACAGT	1174.85	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.678;DP=1286;FS=17.928;HRun=0;HaplotypeScore=282.7229;InbreedingCoeff=0.9853;MQ=66.61;MQ0=7;MQRankSum=-5.975;QD=61.83;ReadPosRankSum=-3.265;VQSLOD=2.2702;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:60:99:0,160,3498	0/0:11,0:10:24.08:0,24,530	0/0:65,0:38:72.65:0,73,1367	0/0:92,0:51:48.92:0,49,836	0/0:30,0:30:87.28:0,87,1912	0/0:34,0:33:87.27:0,87,1807	0/0:56,0:56:99:0,141,2884	0/0:34,0:34:67.82:0,68,1643	0/0:54,0:54:99:0,147,3094	0/0:67,0:67:99:0,178,3827	0/0:19,0:19:38.97:0,39,799	0/0:62,0:62:99:0,171,3605	0/0:60,0:60:99:0,169,3654	0/0:61,0:61:99:0,172,3721	0/0:46,0:46:99:0,132,2750	0/0:52,0:52:99:0,147,3050	0/0:33,0:33:93.32:0,93,2010	1/1:7,9:18:16.87:1265,17,0	0/0:30,0:30:78.27:0,78,1599	0/0:32,0:32:87.28:0,87,1773	0/0:145,0:143:99:0,379,8029	0/0:33,0:33:81.28:0,81,1669	0/0:30,0:30:66.17:0,66,1283	0/0:51,0:51:99:0,135,2895	0/0:30,0:29:72.04:0,72,1531	0/0:52,0:52:99:0,107,2626	0/0:16,0:16:45.11:0,45,964	0/0:9,0:9:24.08:0,24,529
chr10	76630636	.	ACACACT	A	467.82	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=6.496;DP=1345;FS=0.967;HRun=0;HaplotypeScore=272.4167;InbreedingCoeff=0.7362;MQ=60.05;MQ0=9;MQRankSum=-4.448;QD=10.63;ReadPosRankSum=-1.326;VQSLOD=2.3369;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,138,4158	0/0:10,0:10:27.07:0,27,786	0/0:58,0:11:10.26:0,10,229	0/0:82,0:30:17.05:0,17,646	0/0:29,0:28:45.15:0,45,1278	0/0:30,0:30:69.15:0,69,1982	0/0:59,0:59:99:0,144,4687	0/0:53,0:53:99:0,117,3535	0/0:52,0:52:99:0,126,3998	0/0:67,0:67:99:0,168,5207	0/0:29,0:28:63.46:0,63,1875	0/0:73,0:73:99:0,186,5763	0/0:66,0:66:99:0,168,4981	0/0:59,0:59:99:0,157,4829	0/0:42,0:42:99:0,108,3490	0/0:44,0:44:99:0,114,3659	0/0:38,0:38:94.87:0,95,2934	1/1:15,8:22:23.08:560,23,0	0/1:21,0:19:0.97:1,0,985	0/0:33,0:32:87.25:0,87,2564	0/0:167,0:167:99:0,391,11799	0/0:42,0:42:90.40:0,90,2634	0/0:34,0:34:72.24:0,72,2048	0/0:62,0:62:99:0,141,4348	0/0:29,0:29:72.09:0,72,2245	0/0:46,0:45:99:0,99,3056	0/0:24,0:24:43.36:0,43,1636	0/0:14,0:14:39.13:0,39,1293
chr10	76630758	.	AGT	A	656.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.725;DP=1432;FS=2.803;HRun=0;HaplotypeScore=227.4146;InbreedingCoeff=0.9849;MQ=57.17;MQ0=26;MQRankSum=3.079;QD=19.90;ReadPosRankSum=-1.914;VQSLOD=3.2484;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:33:48.16:752,48,0	0/0:19,0:19:51.17:0,51,985	0/0:89,0:30:15.18:0,15,909	0/0:99,1:35:49.32:0,49,978	0/0:37,0:37:69.52:0,70,1330	0/0:29,0:29:71.99:0,72,1425	0/0:50,0:50:99:0,139,2771	0/0:40,0:40:99:0,120,2317	0/0:65,0:64:99:0,159,3099	0/0:74,0:74:99:0,169,3989	0/0:24,0:24:48.16:0,48,919	0/0:79,0:79:99:0,195,3779	0/0:65,0:65:99:0,157,2948	0/0:62,0:62:99:0,154,2895	0/0:65,0:65:99:0,155,2967	0/0:54,0:54:99:0,142,2722	0/0:30,1:31:88.18:0,88,1652	0/0:38,0:38:99:0,99,1930	0/0:27,0:25:75.25:0,75,1427	0/0:25,0:25:63.19:0,63,1149	0/0:162,0:162:99:0,469,9065	0/0:34,0:33:78:0,78,1464	0/0:34,0:34:81.28:0,81,1538	0/0:49,0:49:99:0,129,2508	0/0:37,0:37:99:0,102,2046	0/0:61,0:61:99:0,162,3288	0/0:23,0:23:63.22:0,63,1229	0/0:22,1:22:60.17:0,60,1149
chr10	76630783	.	GAC	G	775.54	PASS	AB=0.990;AC=3;AF=0.054;AN=56;BaseQRankSum=6.568;DP=1464;FS=1.339;HRun=0;HaplotypeScore=225.5984;InbreedingCoeff=0.5171;MQ=57.95;MQ0=15;MQRankSum=-0.259;QD=5.58;ReadPosRankSum=0.777;VQSLOD=3.2887;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,1:38:0.88:0,1,496	0/0:25,0:25:56.93:0,57,841	0/0:77,0:25:28.62:0,29,383	0/1:99,1:31:25.20:25,0,305	0/0:40,1:41:54:0,54,1242	0/0:34,1:34:39.85:0,40,1185	0/0:39,0:39:87.30:0,87,1451	0/0:40,0:40:62.11:0,62,1307	0/0:62,0:61:99:0,135,2226	0/0:76,0:76:99:0,133,2647	0/0:28,0:28:60.13:0,60,940	0/0:78,0:78:99:0,192,3100	0/0:76,0:76:99:0,172,2797	0/0:56,0:56:99:0,129,2085	0/0:56,1:57:94.04:0,94,2068	0/0:48,0:48:99:0,126,2089	0/0:45,0:45:99:0,114,1888	1/1:9,30:39:10.59:848,11,0	0/0:28,0:28:57.19:0,57,930	0/0:26,0:26:78.24:0,78,1247	0/0:175,1:175:99:0,416,7315	0/0:37,0:37:89.90:0,90,1409	0/0:29,0:29:72.21:0,72,1151	0/0:60,1:61:91.15:0,91,1946	0/0:47,0:47:99:0,123,1994	0/0:54,1:55:99:0,106,2272	0/0:21,0:21:57.11:0,57,920	0/0:23,0:22:60.20:0,60,989
chr10	76630987	.	GACAC	G	7291.73	PASS	AB=0.557;AC=11;AF=0.212;AN=52;BaseQRankSum=15.682;DP=1527;FS=5.095;HRun=0;HaplotypeScore=268.2550;InbreedingCoeff=0.8825;MQ=48.32;MQ0=126;MQRankSum=3.183;QD=21.64;ReadPosRankSum=5.493;VQSLOD=3.8889;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:52:99:0,118,2863	0/0:15,0:14:28.14:0,28,671	./.	./.	0/0:43,0:40:75.25:0,75,1891	0/0:31,0:29:75.24:0,75,1833	0/0:43,0:41:72.25:0,72,1724	0/0:41,0:20:45.14:0,45,1107	1/1:12,56:66:90.49:1582,90,0	0/0:90,0:79:99:0,223,5472	0/0:38,0:36:81.07:0,81,1972	1/1:12,63:74:99:1868,104,0	1/1:12,54:62:96.49:1632,96,0	0/0:64,0:63:99:0,150,3691	0/0:67,0:62:99:0,159,4030	0/0:87,3:89:99:0,181,5639	0/0:44,0:43:99:0,114,2760	0/0:43,0:42:83.14:0,83,2460	0/0:21,0:10:27.09:0,27,664	0/0:36,0:34:81.27:0,81,2006	0/0:173,0:158:99:0,334,8331	0/1:10,39:47:34.94:659,0,35	1/1:2,25:26:18.06:323,18,0	1/1:16,35:49:69.24:1228,69,0	0/0:37,0:35:84.27:0,84,2083	0/0:62,0:57:99:0,156,3769	0/0:32,0:31:75.24:0,75,1842	0/0:22,0:17:39.13:0,39,974
chr10	76631636	.	TACA	T	1175.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.221;DP=536;FS=1.747;HRun=0;HaplotypeScore=76.0099;InbreedingCoeff=0.9013;MQ=66.57;MQ0=0;MQRankSum=-2.401;QD=36.72;ReadPosRankSum=-0.641;VQSLOD=4.1600;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,29:32:78.27:1270,78,0	0/0:2,0:2:6.02:0,6,134	0/0:19,0:18:42.14:0,42,827	0/0:13,0:13:30.10:0,30,582	0/0:30,0:30:84.29:0,84,1840	0/0:18,0:18:54.19:0,54,1201	0/0:13,0:13:36.11:0,36,746	0/0:32,0:32:84.26:0,84,1731	0/0:14,0:14:39.13:0,39,851	0/0:21,0:21:60.21:0,60,1340	0/0:22,0:22:66.23:0,66,1424	0/0:19,0:19:57.18:0,57,1231	0/0:15,0:15:45.15:0,45,995	0/0:16,0:16:42.14:0,42,938	0/0:23,0:23:66.23:0,66,1474	0/0:21,0:21:60.19:0,60,1296	0/0:26,0:26:78.25:0,78,1692	0/0:21,0:21:63.22:0,63,1404	0/0:23,0:23:69.24:0,69,1542	0/0:27,0:27:81.28:0,81,1808	0/0:17,0:17:51.18:0,51,1121	0/0:15,0:15:42.14:0,42,924	0/0:14,0:14:39.13:0,39,870	0/0:15,0:15:45.15:0,45,1005	0/0:23,0:23:69.24:0,69,1508	0/0:20,0:20:60.20:0,60,1267	0/0:17,0:17:51.18:0,51,1135	0/0:8,0:8:21.07:0,21,469
chr10	76631946	.	AGGACGGAT	A	3412.23	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=10.553;DP=855;FS=1.392;HRun=0;HaplotypeScore=214.6364;InbreedingCoeff=0.1128;MQ=70.10;MQ0=5;MQRankSum=-11.665;QD=15.03;ReadPosRankSum=0.511;VQSLOD=2.9251;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:45:99:256,0,985	0/0:14,0:14:39:0,39,1251	0/0:41,0:25:50.75:0,51,482	0/0:35,0:23:68.43:0,68,546	0/0:28,0:27:77.86:0,78,1576	0/0:25,0:25:68.79:0,69,1828	0/0:31,0:31:80.89:0,81,1942	0/0:33,0:33:80.63:0,81,905	0/1:30,0:30:99:674,0,156	0/0:29,0:29:84.08:0,84,1710	0/0:12,0:12:29.03:0,29,340	0/1:51,0:51:99:1107,0,321	0/1:37,0:37:99:471,0,200	0/0:36,0:36:99:0,105,2738	0/0:49,0:49:99:0,147,3394	0/0:38,0:38:71.92:0,72,1166	0/0:31,0:31:88.19:0,88,1698	1/1:1,22:23:14.84:342,15,0	0/0:25,0:25:65.03:0,65,1160	0/0:23,0:23:65.93:0,66,1751	0/0:47,0:47:99:0,129,3229	0/1:24,0:24:99:476,0,103	0/1:17,0:17:85.24:85,0,110	0/0:34,0:34:11.35:0,11,309	0/0:27,0:27:68.66:0,69,844	0/0:31,0:31:89.99:0,90,2630	0/0:33,0:33:99:0,99,2947	0/0:6,0:6:17.88:0,18,345
chr10	76631950	.	CGGATGGAT	C	4317	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=8.228;DP=857;FS=1.071;HRun=0;HaplotypeScore=207.9654;InbreedingCoeff=0.9137;MQ=69.60;MQ0=5;MQRankSum=-11.201;QD=20.56;ReadPosRankSum=0.324;VQSLOD=4.3993;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:51.17:0,51,1471	0/0:14,0:14:33.11:0,33,1050	0/0:38,0:22:7.83:0,8,72	./.	0/0:28,0:27:39.13:0,39,1230	0/0:24,0:24:39.12:0,39,1485	0/0:29,0:29:48.16:0,48,1638	0/0:29,0:29:27.09:0,27,547	1/1:11,19:30:39.13:928,39,0	0/0:15,0:32:57.14:0,57,1429	0/0:13,0:13:20.08:0,20,316	1/1:23,29:52:66.23:1558,66,0	1/1:14,21:35:27.09:675,27,0	0/0:35,0:35:63.22:0,63,2142	0/0:52,0:53:89.07:0,89,2842	0/0:18,0:43:30.10:0,30,704	0/0:34,0:34:43.70:0,44,1325	1/1:23,0:23:12.04:252,12,0	0/0:22,0:22:24.07:0,24,843	0/0:23,0:23:45.15:0,45,1531	0/0:46,0:46:78.21:0,78,2615	1/1:8,13:21:33.11:686,33,0	1/1:8,9:17:8.25:163,8,0	1/1:21,11:32:2.95:55,3,0	0/0:19,0:33:30.09:0,30,508	0/0:31,0:31:63.22:0,63,2226	0/0:34,0:34:75.26:0,75,2540	0/0:6,0:6:6.02:0,6,246
chr10	76632038	.	T	TGAATGAATGAAC	964.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.176;DP=827;FS=3.683;HRun=0;HaplotypeScore=256.1103;InbreedingCoeff=0.9909;MQ=65.45;MQ0=2;MQRankSum=-3.148;QD=21.44;ReadPosRankSum=1.476;VQSLOD=2.6197;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:45:18.06:1055,18,0	0/0:11,0:11:27.02:0,27,707	0/0:30,0:25:68.67:0,69,774	0/0:18,0:18:45.49:0,45,473	0/0:21,0:21:63.10:0,63,1371	0/0:20,0:20:54.14:0,54,1333	0/0:25,0:25:75.13:0,75,1885	0/0:35,0:34:99:0,99,1763	0/0:35,0:35:84.10:0,84,2290	0/0:28,0:28:81.21:0,81,2009	0/0:28,0:28:77.96:0,78,1756	0/0:40,0:40:78.10:0,78,2068	0/0:32,0:32:84.18:0,84,2103	0/0:33,0:33:96.20:0,96,2611	0/0:51,0:51:99:0,150,3691	0/0:35,0:35:81.22:0,81,2264	0/0:29,0:29:86.85:0,87,2136	0/0:23,0:23:51.12:0,51,1276	0/0:30,0:29:78.07:0,78,1557	0/0:29,0:29:78.14:0,78,1986	0/0:46,0:46:99:0,132,3396	0/0:22,0:22:60.03:0,60,1636	0/0:24,0:24:56.29:0,56,1681	0/0:29,0:29:69.06:0,69,1769	0/0:27,0:27:63.11:0,63,1397	0/0:33,0:33:93.20:0,93,2130	0/0:32,0:32:90.22:0,90,2338	0/0:16,0:16:45.02:0,45,1067
chr10	76632180	.	AG	A	7374.13	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.644;DP=837;FS=0.629;HRun=1;HaplotypeScore=79.7541;InbreedingCoeff=1.0000;MQ=82.70;MQ0=0;MQRankSum=-3.351;QD=38.61;ReadPosRankSum=3.906;VQSLOD=5.4364;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,166,2584	0/0:15,0:15:45.15:0,45,717	0/0:25,0:25:75.25:0,75,1158	0/0:21,0:21:59.17:0,59,838	0/0:29,0:29:84.27:0,84,1312	0/0:23,0:23:63.21:0,63,1007	0/0:39,0:39:99:0,117,1824	0/0:46,0:46:99:0,138,2183	1/1:0,27:27:69.23:965,69,0	0/0:29,0:29:87.30:0,87,1392	0/0:24,0:24:72.25:0,72,1150	1/1:0,45:45:99:1798,129,0	1/1:0,31:31:81.27:1130,81,0	0/0:27,0:27:81.28:0,81,1281	0/0:44,0:44:99:0,132,2084	0/0:31,0:31:93.32:0,93,1486	0/0:25,0:25:75.26:0,75,1194	0/0:20,0:19:60.20:0,60,959	0/0:34,0:34:99:0,102,1578	0/0:22,0:22:66.23:0,66,1055	0/0:35,0:35:99:0,102,1628	1/1:0,27:27:78.26:1091,78,0	1/1:0,24:24:66.22:923,66,0	1/1:0,37:37:99:1469,105,0	0/0:22,0:22:66.21:0,66,1032	0/0:37,0:37:99:0,111,1773	0/0:31,0:29:93.32:0,93,1486	0/0:12,0:12:36.12:0,36,575
chr10	76632279	.	ACT	A	1142.10	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.158;DP=705;FS=1.554;HRun=0;HaplotypeScore=88.8331;InbreedingCoeff=0.9450;MQ=86.29;MQ0=0;MQRankSum=-0.681;QD=38.07;ReadPosRankSum=1.734;VQSLOD=5.8997;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,150,2740	0/0:11,0:11:33.11:0,33,602	0/0:26,0:26:69.21:0,69,1196	0/0:26,0:26:70.73:0,71,1077	0/0:29,0:29:81.28:0,81,1500	0/0:20,0:20:54.16:0,54,939	0/0:27,0:27:78.27:0,78,1400	0/0:36,0:36:99:0,102,1783	0/0:22,0:22:66.23:0,66,1236	0/0:20,0:20:60.21:0,60,1101	0/0:16,0:16:39.13:0,39,721	0/0:31,0:31:90.31:0,90,1678	0/0:21,0:21:63.22:0,63,1180	0/0:21,0:21:63.22:0,63,1163	0/0:37,0:37:99:0,108,1925	0/0:18,0:18:54.17:0,54,973	0/0:32,0:32:90.28:0,90,1613	1/1:0,30:30:84.28:1237,84,0	0/0:24,0:24:63.19:0,63,1091	0/0:18,0:18:48:0,48,859	0/0:33,0:33:96.31:0,96,1725	0/0:17,0:17:51.16:0,51,908	0/0:18,0:18:48.12:0,48,854	0/0:39,0:39:99:0,111,2015	0/0:23,0:23:69.24:0,69,1292	0/0:27,0:27:75.25:0,75,1356	0/0:25,0:25:75.24:0,75,1372	0/0:5,0:5:9.03:0,9,160
chr10	76634471	.	G	GA	2752.75	PASS	AB=0.703;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.352;DP=505;FS=14.250;HRun=10;HaplotypeScore=52.8310;InbreedingCoeff=0.7308;MQ=62.34;MQ0=6;MQRankSum=-0.744;QD=14.72;ReadPosRankSum=2.684;VQSLOD=2.3067;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,32:41:31.44:750,31,0	0/0:9,0:9:23.95:0,24,194	0/0:14,0:7:5.54:0,6,80	0/0:12,0:8:19.80:0,20,132	0/0:29,0:29:62.87:0,63,512	0/0:21,1:22:27.95:0,28,436	0/0:15,0:15:44.95:0,45,369	0/0:24,0:23:47.89:0,48,389	1/1:4,11:15:27.07:287,27,0	0/0:14,0:12:29.94:0,30,245	0/0:14,1:15:6.97:0,7,263	1/1:6,18:24:26.48:487,26,0	0/1:1,4:5:15.53:55,0,16	0/0:14,0:14:32.94:0,33,270	0/0:15,0:15:41.95:0,42,345	0/0:13,0:13:35.96:0,36,296	0/0:35,0:35:85.85:0,86,678	1/1:6,29:33:55.60:746,56,0	0/1:28,2:26:0.83:1,0,402	0/0:14,0:14:35.95:0,36,296	0/0:12,0:12:32.95:0,33,271	1/1:3,5:9:14.87:140,15,0	1/1:5,15:20:17.74:391,18,0	0/1:3,5:8:12.61:84,0,13	0/0:22,0:22:31.16:0,31,367	0/0:18,0:18:43.97:0,44,351	0/0:13,0:13:32.96:0,33,271	0/0:6,0:6:14.98:0,15,123
chr10	76635153	.	GTGATAGGT	G	7223.29	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=3.666;DP=604;FS=12.512;HRun=0;HaplotypeScore=178.2206;InbreedingCoeff=0.0621;MQ=59.95;MQ0=5;MQRankSum=-7.168;QD=15.14;ReadPosRankSum=7.717;VQSLOD=2.3995;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:2.12:27,0,2	0/1:16,0:16:68.90:277,0,69	0/0:11,0:11:23.93:0,24,239	0/0:9,0:9:22.65:0,23,190	0/1:26,0:26:99:112,0,184	0/1:21,0:21:52.96:181,0,53	0/1:20,0:20:30.90:31,0,84	0/0:35,0:29:17.59:0,18,161	1/1:16,3:19:42.03:604,42,0	0/1:39,0:39:99:661,0,176	0/1:16,0:16:73.51:88,0,74	1/1:12,12:24:66.05:1083,66,0	1/1:24,2:26:59.94:703,60,0	0/1:20,0:20:99:165,0,111	0/1:33,0:33:3.46:324,0,3	0/0:19,0:19:27.07:0,27,332	0/1:17,0:17:59.11:212,0,59	1/1:12,0:12:27.56:205,28,0	0/0:25,0:25:44.60:0,45,463	0/0:28,0:28:68.50:0,69,602	0/1:17,0:17:2.09:2,0,105	1/1:19,3:22:51.05:676,51,0	1/1:15,3:18:39.05:519,39,0	1/1:16,2:18:20.96:170,21,0	0/1:22,0:22:36:431,0,36	0/1:27,0:27:59.03:558,0,59	0/1:34,0:34:16:16,0,475	1/1:5,0:5:9.03:180,9,0
chr10	76635218	.	AT	A	59.32	PASS	AB=0.720;AC=1;AF=0.018;AN=56;BaseQRankSum=5.375;DP=666;FS=7.522;HRun=1;HaplotypeScore=142.1285;InbreedingCoeff=-0.0197;MQ=60.39;MQ0=7;MQRankSum=-3.944;QD=3.30;ReadPosRankSum=-0.631;VQSLOD=-0.4104;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:26.76:0,27,428	0/0:11,0:11:30.05:0,30,418	0/0:30,1:12:25.82:0,26,394	0/0:29,0:17:22.71:0,23,294	0/0:30,0:30:66.04:0,66,1024	0/0:26,0:25:60.20:0,60,945	0/0:12,1:13:26.88:0,27,415	0/0:44,0:43:99:0,129,1997	0/0:22,0:22:60.18:0,60,902	0/0:44,0:44:99:0,120,1767	0/0:18,0:18:45.15:0,45,719	0/0:28,0:28:65.33:0,65,862	0/0:14,0:14:30.06:0,30,424	0/0:19,0:19:39.12:0,39,587	0/0:29,0:29:66.18:0,66,979	0/0:22,0:22:60.20:0,60,959	0/0:14,2:16:34.45:0,34,641	0/1:11,7:17:99:134,0,429	0/0:20,0:20:60.20:0,60,953	0/0:36,0:36:99:0,99,1559	0/0:12,0:12:30.10:0,30,479	0/0:20,0:19:48.14:0,48,734	0/0:15,0:15:32.61:0,33,499	0/0:13,0:13:11.78:0,12,192	0/0:37,0:37:86.72:0,87,1348	0/0:29,0:29:84.98:0,85,1208	0/0:36,0:36:87.28:0,87,1349	0/0:11,0:11:30.08:0,30,435
chr10	76635266	.	TA	T	1431.39	PASS	AB=0.675;AC=6;AF=0.107;AN=56;BaseQRankSum=5.765;DP=696;FS=9.825;HRun=1;HaplotypeScore=137.1555;InbreedingCoeff=-0.1276;MQ=54.77;MQ0=16;MQRankSum=0.642;QD=10.08;ReadPosRankSum=-0.068;VQSLOD=0.6098;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:52.80:0,53,873	0/0:15,0:15:45.14:0,45,684	0/0:18,0:11:15.04:0,15,194	0/0:7,0:3:3.48:0,3,41	0/0:31,0:31:69.42:0,69,822	0/0:28,0:27:81.22:0,81,1212	0/0:15,0:15:19.31:0,19,543	0/0:49,0:37:99:0,111,1666	0/1:13,12:25:99:361,0,335	0/0:43,0:42:99:0,126,1664	0/0:26,0:26:69.20:0,69,942	0/1:13,12:25:99:180,0,326	0/1:13,9:22:99:218,0,258	0/0:23,0:23:45.75:0,46,454	0/0:31,0:31:87.28:0,87,1337	0/0:21,0:22:66.17:0,66,859	0/0:21,0:21:17.41:0,17,653	0/0:14,0:12:32.45:0,32,334	0/0:16,0:15:45.14:0,45,659	0/0:31,0:30:84.29:0,84,1291	0/0:15,0:15:45.15:0,45,707	0/1:13,14:27:99:417,0,160	0/1:11,14:25:26.65:230,0,27	0/1:10,8:18:74.15:150,0,74	0/0:40,0:40:99:0,117,1585	0/0:22,0:22:66.22:0,66,1026	0/0:34,0:34:99:0,102,1597	0/0:22,0:22:63.21:0,63,985
chr10	76635286	.	TA	T	1616.32	PASS	AB=0.694;AC=7;AF=0.125;AN=56;BaseQRankSum=8.023;DP=712;FS=3.944;HRun=1;HaplotypeScore=143.7535;InbreedingCoeff=-0.0859;MQ=54.98;MQ0=21;MQRankSum=-0.654;QD=10.63;ReadPosRankSum=0.768;VQSLOD=1.8835;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:50.04:0,50,945	0/0:16,0:16:48.14:0,48,722	0/0:9,0:3:9.03:0,9,114	0/1:6,0:3:2.35:2,0,5	0/0:28,0:28:57.37:0,57,631	0/0:24,0:24:69.23:0,69,1064	0/0:15,0:15:39.06:0,39,569	0/0:57,0:42:99:0,129,1866	0/1:10,15:25:99:413,0,207	0/0:38,0:37:99:0,108,1394	0/0:25,0:25:66.20:0,66,908	0/1:10,14:24:99:267,0,107	0/1:8,18:26:99:417,0,133	0/0:24,0:24:48.76:0,49,493	0/0:37,0:37:99:0,99,1506	0/0:26,0:26:75.22:0,75,988	0/0:22,0:23:51.92:0,52,841	0/0:16,0:13:39.12:0,39,552	0/0:21,0:18:54.17:0,54,791	0/0:28,0:27:81.26:0,81,1214	0/0:20,0:20:60.14:0,60,838	0/1:10,16:26:99:368,0,257	0/1:12,15:27:71.87:184,0,72	0/1:12,6:18:79.06:91,0,79	0/0:32,0:32:96.25:0,96,1234	0/0:29,0:29:87.30:0,87,1328	0/0:36,0:36:99:0,108,1621	0/0:25,0:25:72.21:0,72,1076
chr10	76635347	.	A	AGATG	5016.20	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-2.157;DP=759;FS=12.351;HRun=0;HaplotypeScore=154.9193;InbreedingCoeff=0.9984;MQ=59.77;MQ0=1;MQRankSum=-1.797;QD=33.89;ReadPosRankSum=3.802;VQSLOD=4.4110;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:78.27:0,78,1276	0/0:15,0:15:30.10:0,30,493	0/0:30,0:23:39.12:0,39,596	0/0:25,0:21:24.55:0,25,388	0/0:27,0:27:69.24:0,69,1123	0/0:30,0:30:69.23:0,69,1129	0/0:20,0:20:33.09:0,33,516	0/0:37,0:37:67.50:0,67,1071	1/1:16,14:30:45.15:1037,45,0	0/0:34,0:34:69.23:0,69,1099	0/0:23,0:23:51.17:0,51,838	1/1:7,18:25:45.07:988,45,0	1/1:18,10:29:48.11:990,48,0	0/0:21,0:21:48.16:0,48,779	0/0:40,0:40:81.28:0,81,1327	0/0:33,0:32:84.29:0,84,1370	0/0:27,0:27:68.84:0,69,1077	0/0:16,0:15:33.11:0,33,534	0/0:19,0:18:36.11:0,36,556	0/0:23,0:23:51.13:0,51,781	0/0:32,0:32:90.31:0,90,1471	1/1:9,12:22:33.11:735,33,0	1/1:5,7:13:20.79:461,21,0	1/1:6,23:29:33.07:806,33,0	0/0:26,0:26:54.18:0,54,868	0/0:31,0:31:75.24:0,75,1185	0/0:35,0:34:81.26:0,81,1295	0/0:26,0:26:57.17:0,57,893
chr10	76635712	.	GT	G	2437.04	PASS	AB=0.753;AC=21;AF=0.375;AN=56;BaseQRankSum=8.199;DP=609;FS=0.366;HRun=14;HaplotypeScore=71.9848;InbreedingCoeff=0.4872;MQ=69.85;MQ0=0;MQRankSum=-0.286;QD=7.94;ReadPosRankSum=3.626;VQSLOD=2.9236;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:32:35.01:0,35,407	0/0:11,0:11:26.91:0,27,231	0/1:22,1:17:20.11:20,0,77	0/0:13,0:8:5.55:0,6,61	0/0:27,0:29:68.69:0,69,596	0/0:28,2:31:51.50:0,52,592	0/1:15,2:18:8.29:8,0,205	0/0:28,1:29:45.40:0,45,538	1/1:5,9:15:16.13:175,16,0	0/1:9,13:22:11.43:213,0,11	1/1:3,18:23:42.61:279,43,0	1/1:8,14:24:28.49:182,28,0	0/1:5,11:17:2.02:124,0,2	0/0:12,3:15:6.37:0,6,183	0/0:21,1:24:36.30:0,36,460	1/1:5,12:17:4.85:178,5,0	0/1:21,5:28:60.33:60,0,323	0/0:19,0:19:41.86:0,42,368	0/0:32,1:33:30.90:0,31,463	0/0:23,0:26:33.39:0,33,417	0/0:7,0:7:18.02:0,18,167	1/1:4,25:31:44.27:435,44,0	1/1:3,22:26:46.45:313,46,0	0/1:1,11:12:4.03:120,0,4	1/1:2,30:32:71.39:493,71,0	0/0:19,0:21:44.89:0,45,404	0/1:15,4:19:31.44:31,0,294	0/0:11,0:12:30.01:0,30,273
chr10	76637299	.	TTTTG	T	4216.65	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.180;DP=717;FS=6.234;HRun=0;HaplotypeScore=118.2790;InbreedingCoeff=0.9911;MQ=67.62;MQ0=4;MQRankSum=-1.034;QD=30.34;ReadPosRankSum=5.651;VQSLOD=4.4361;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:97.34:0,97,2394	0/0:15,0:15:45.13:0,45,992	0/0:38,0:26:53.01:0,53,749	0/0:34,0:28:44.80:0,45,789	0/0:30,0:30:78.13:0,78,1534	0/0:23,0:23:69.19:0,69,1486	0/0:19,0:19:55.25:0,55,852	0/0:35,0:35:89.07:0,89,1411	1/1:1,31:32:10.91:870,11,0	0/0:28,0:26:72.20:0,72,1528	0/0:13,0:13:36.09:0,36,751	1/1:1,22:23:27.09:512,27,0	1/1:0,20:20:26.99:511,27,0	0/0:19,0:19:54.13:0,54,1198	0/0:34,0:34:99:0,99,2077	0/0:34,0:34:99:0,99,2227	0/0:26,0:26:75.17:0,75,1374	0/0:29,0:29:47.88:0,48,1613	0/0:21,0:19:54.04:0,54,928	0/0:24,0:24:69.17:0,69,1354	0/0:22,0:21:60.16:0,60,1229	1/1:2,20:22:54.06:828,54,0	1/1:1,11:12:23.34:415,23,0	1/1:1,29:30:57.20:1081,57,0	0/0:17,0:17:51.10:0,51,975	0/0:24,0:24:66.19:0,66,1476	0/0:37,0:37:99:0,99,2025	0/0:16,0:16:48.11:0,48,1013
chr10	76638964	.	TA	T	1714.08	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.120;DP=704;FS=0.000;HRun=7;HaplotypeScore=62.0755;InbreedingCoeff=0.9976;MQ=74.30;MQ0=0;MQRankSum=-4.663;QD=24.49;ReadPosRankSum=1.532;VQSLOD=4.1017;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,43:45:99:1224,120,0	0/0:11,0:11:30.06:0,30,341	0/0:23,0:23:48.15:0,48,603	0/0:11,0:11:23.97:0,24,280	0/0:25,0:25:72.22:0,72,894	0/0:28,0:28:81.26:0,81,1017	0/0:20,0:20:57.17:0,57,702	0/0:31,0:31:75.23:0,75,927	0/0:24,0:24:72.23:0,72,906	0/0:30,0:30:81.23:0,81,1003	0/0:35,0:35:99:0,102,1271	0/0:29,0:29:84.25:0,84,1033	0/0:16,0:16:42.13:0,42,528	0/0:15,0:15:42.13:0,42,519	0/0:28,0:28:78.24:0,78,970	0/0:18,0:18:54.17:0,54,679	0/0:31,0:31:93.25:0,93,1128	1/1:1,24:25:60.14:612,60,0	0/0:18,0:18:51.13:0,51,607	0/0:47,0:47:99:0,123,1546	0/0:27,0:27:75.22:0,75,930	0/0:20,0:20:57.18:0,57,716	0/0:27,0:27:81.26:0,81,1018	0/0:22,0:22:66.21:0,66,830	0/0:27,0:27:78.24:0,78,970	0/0:34,0:34:90.25:0,90,1114	0/0:29,0:29:84.26:0,84,1041	0/0:8,0:8:24.06:0,24,286
chr10	76641540	.	ACTT	A	5048.17	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.571;DP=660;FS=7.115;HRun=0;HaplotypeScore=93.9728;InbreedingCoeff=0.9994;MQ=72.90;MQ0=0;MQRankSum=-1.274;QD=44.28;ReadPosRankSum=3.299;VQSLOD=6.6594;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,3079	0/0:13,0:13:39.13:0,39,884	0/0:18,0:16:42.13:0,42,844	0/0:23,0:23:66.23:0,66,1453	0/0:30,0:30:84.29:0,84,1873	0/0:21,0:21:63.19:0,63,1354	0/0:23,0:23:69.24:0,69,1525	0/0:50,0:50:99:0,135,3023	1/1:1,22:23:60.21:999,60,0	0/0:26,0:26:75.26:0,75,1701	0/0:11,0:11:33.11:0,33,747	1/1:0,22:22:60.20:991,60,0	1/1:0,19:19:54.18:900,54,0	0/0:21,0:21:60.21:0,60,1358	0/0:22,0:22:66.21:0,66,1434	0/0:19,0:19:57.20:0,57,1280	0/0:28,0:27:75.26:0,75,1700	0/0:19,0:19:51.17:0,51,1126	0/0:21,0:21:51.18:0,51,1156	0/0:24,0:24:72.25:0,72,1614	0/0:43,0:43:99:0,126,2808	1/1:0,13:13:36.12:599,36,0	1/1:1,8:9:24.08:389,24,0	1/1:0,28:28:72.20:1170,72,0	0/0:13,0:13:33.11:0,33,718	0/0:25,0:25:75.26:0,75,1671	0/0:26,0:26:78.27:0,78,1736	0/0:22,0:22:66.23:0,66,1494
chr10	76642496	.	GT	G	1854.17	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.051;DP=598;FS=2.507;HRun=11;HaplotypeScore=63.8029;InbreedingCoeff=0.9326;MQ=70.92;MQ0=3;MQRankSum=-1.636;QD=15.71;ReadPosRankSum=2.151;VQSLOD=4.5138;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:29:69:0,69,712	0/0:6,0:6:18.02:0,18,179	0/0:23,0:18:34.63:0,35,261	0/0:13,0:7:11.95:0,12,102	0/0:29,0:29:50.74:0,51,732	0/0:29,0:29:72.17:0,72,762	0/0:15,0:15:36.06:0,36,363	0/0:37,0:36:81.18:0,81,844	1/1:2,7:9:17.97:148,18,0	0/0:24,1:26:35.33:0,35,556	0/0:25,0:25:63.16:0,63,672	1/1:0,15:15:35.69:295,36,0	1/1:2,13:15:35.95:296,36,0	0/0:24,0:26:74.81:0,75,735	0/0:18,2:20:1.80:0,2,413	0/0:27,1:28:32.15:0,32,509	0/0:29,0:29:61:0,61,618	1/1:4,9:14:25.98:202,26,0	0/0:20,0:20:48.11:0,48,501	0/0:31,0:31:81.20:0,81,864	0/0:6,0:6:15.04:0,15,160	1/1:2,11:14:28.99:227,29,0	1/1:7,23:30:6.24:411,6,0	1/1:0,21:21:56.94:468,57,0	0/0:18,1:19:32.49:0,32,546	0/0:23,0:23:63.16:0,63,672	0/0:31,0:31:90.20:0,90,939	0/0:15,0:15:39.06:0,39,399
chr10	76643181	.	G	GA	8996.34	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-13.847;DP=556;FS=8.111;HRun=3;HaplotypeScore=49.1439;InbreedingCoeff=0.9929;MQ=77.05;MQ0=0;MQRankSum=-2.658;QD=37.64;ReadPosRankSum=2.578;VQSLOD=4.9966;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:81.22:1111,81,0	0/0:5,0:5:15.05:0,15,180	0/0:19,0:19:47.15:0,47,524	0/0:4,0:4:12.04:0,12,143	0/0:36,0:36:99:0,102,1224	0/0:18,0:18:51.13:0,51,589	0/0:14,0:14:39.11:0,39,457	0/0:29,0:29:78.23:0,78,927	1/1:0,12:12:36.12:504,36,0	1/1:0,28:29:87.29:1212,87,0	1/1:0,24:24:72.24:1008,72,0	1/1:1,23:24:57.19:798,57,0	1/1:0,10:10:30.10:420,30,0	0/0:14,0:14:42.13:0,42,504	0/0:19,0:19:57.17:0,57,684	1/1:2,19:20:54.16:726,54,0	0/0:22,0:22:66.16:0,66,765	1/1:2,17:19:45.15:630,45,0	0/0:11,0:11:30.09:0,30,359	0/0:38,0:38:99:0,111,1332	0/0:13,0:13:39.12:0,39,468	1/1:0,14:14:39.13:546,39,0	1/1:2,21:24:60.18:821,60,0	1/1:1,8:9:24.08:336,24,0	1/1:0,23:23:63.21:882,63,0	0/0:23,0:23:66.19:0,66,782	0/0:43,0:43:99:0,129,1533	0/0:9,0:9:27.08:0,27,324
chr10	76644066	.	A	AT	2138.28	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-10.955;DP=534;FS=2.124;HRun=9;HaplotypeScore=52.7106;InbreedingCoeff=0.9799;MQ=67.58;MQ0=0;MQRankSum=0.568;QD=24.30;ReadPosRankSum=2.152;VQSLOD=4.5406;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:83.97:0,84,729	0/0:9,0:9:26.98:0,27,230	0/0:18,0:12:19.17:0,19,147	0/0:17,0:11:14.90:0,15,130	0/0:29,0:29:77.98:0,78,677	0/0:21,1:22:23.87:0,24,436	0/0:14,0:14:38.97:0,39,334	0/0:37,0:36:92.97:0,93,807	1/1:0,14:14:36.10:398,36,0	0/0:30,0:30:83.98:0,84,729	0/0:17,0:17:50.97:0,51,439	1/1:1,5:6:12.03:133,12,0	1/1:3,17:21:51.13:559,51,0	0/0:13,0:13:35.99:0,36,313	0/0:22,0:22:59.93:0,60,510	0/0:16,0:16:35.97:0,36,313	0/0:28,0:28:77.98:0,78,677	0/0:15,1:16:14.81:0,15,357	0/0:17,0:17:47.99:0,48,417	0/0:21,0:21:53.96:0,54,465	0/0:15,0:15:41.96:0,42,360	1/1:2,13:15:39.58:430,40,0	1/1:3,14:17:13.02:372,13,0	1/1:0,15:15:39.11:431,39,0	0/0:13,0:13:38.99:0,39,338	0/0:19,0:19:45.12:0,45,435	0/0:26,0:26:63.15:0,63,568	0/0:15,0:15:44.99:0,45,390
chr10	76644824	.	TTA	T	747.90	PASS	AB=0.983;AC=13;AF=0.241;AN=54;BaseQRankSum=4.706;DP=324;FS=13.350;HRun=0;HaplotypeScore=40.5985;InbreedingCoeff=0.4404;MQ=61.26;MQ0=15;MQRankSum=0.602;QD=9.12;ReadPosRankSum=1.931;VQSLOD=1.4928;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:40.48:126,0,40	0/0:3,0:3:8.99:0,9,121	0/0:40,0:7:14.52:0,15,132	0/0:26,0:5:6.05:0,6,85	0/0:8,0:8:24.05:0,24,333	0/0:15,0:13:32.95:0,33,457	0/0:7,0:7:21:0,21,298	0/0:30,0:23:57.95:0,58,706	0/0:2,0:2:2.99:0,3,24	1/1:1,7:8:20.85:214,21,0	1/1:0,6:6:14.87:132,15,0	0/1:8,0:8:1.91:2,0,10	0/0:5,0:5:8.64:0,9,53	0/0:4,0:4:6.01:0,6,77	0/0:4,0:4:6.02:0,6,86	1/1:1,3:4:6.02:75,6,0	0/0:30,0:28:77.95:0,78,1055	0/1:15,0:15:11.74:124,0,12	0/0:16,0:12:32.98:0,33,359	0/0:6,0:6:18.01:0,18,211	0/0:8,0:8:18.06:0,18,278	./.	0/1:3,0:3:4.42:4,0,27	0/0:6,0:6:10.46:0,10,46	1/1:0,8:8:18.06:224,18,0	0/1:10,1:10:5.89:6,0,241	0/0:13,0:12:32.98:0,33,394	0/0:19,0:17:51.06:0,51,705
chr10	76644825	.	TA	T	959.98	PASS	AB=0.750;AC=19;AF=0.365;AN=52;BaseQRankSum=3.466;DP=318;FS=5.158;HRun=4;HaplotypeScore=34.9600;InbreedingCoeff=0.7304;MQ=61.36;MQ0=15;MQRankSum=0.701;QD=12.31;ReadPosRankSum=0.462;VQSLOD=1.1016;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,8:17:31.03:329,31,0	0/0:3,0:3:6.02:0,6,72	0/0:40,0:7:13.18:0,13,83	0/0:26,0:5:5.18:0,5,84	0/0:8,0:8:24:0,24,249	0/0:15,0:13:31.24:0,31,309	0/0:7,0:7:20.96:0,21,216	0/0:30,0:24:53.32:0,53,502	./.	1/1:7,1:8:20.84:157,21,0	1/1:6,0:6:11.81:76,12,0	1/1:7,0:7:3.48:36,3,0	1/1:5,0:5:0.29:1,0,0	0/0:4,0:4:3.01:0,3,36	0/0:3,0:3:5.99:0,6,57	1/1:4,0:4:5.88:36,6,0	0/0:29,0:27:68.20:0,68,695	1/1:8,7:15:31.93:295,32,0	0/0:16,0:12:23.98:0,24,230	0/0:6,0:6:12.02:0,12,123	0/0:8,0:8:18.02:0,18,191	./.	0/1:2,1:3:7.59:51,0,8	1/1:5,0:5:6.73:50,7,0	1/1:8,0:8:17.69:109,18,0	0/0:11,0:10:7.30:0,7,172	0/0:12,0:11:26.97:0,27,260	0/0:19,0:17:50.43:0,50,512
chr10	76646750	.	ATC	A	4710.30	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=15.689;DP=822;FS=14.182;HRun=0;HaplotypeScore=101.8125;InbreedingCoeff=0.9999;MQ=74.94;MQ0=0;MQRankSum=-0.147;QD=39.25;ReadPosRankSum=2.922;VQSLOD=5.7631;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.19:0,54,1011	0/0:16,0:16:48.14:0,48,829	0/0:20,0:20:57.20:0,57,1051	0/0:28,0:27:78.23:0,78,1382	0/0:39,0:39:99:0,114,2050	0/0:23,0:23:69.22:0,69,1250	0/0:27,0:27:81.28:0,81,1501	0/0:32,0:32:93.31:0,93,1646	0/0:30,0:30:87.30:0,87,1629	1/1:3,33:36:99:1498,102,0	1/1:1,16:17:42.04:618,42,0	0/0:38,0:38:99:0,111,2046	0/0:51,0:51:99:0,154,2817	0/0:33,0:33:93.32:0,93,1739	0/0:48,0:48:99:0,138,2522	1/1:2,35:37:43.13:1357,43,0	0/0:27,0:27:81.26:0,81,1477	0/0:11,0:11:33.09:0,33,584	0/0:17,0:17:48.16:0,48,840	0/0:49,0:49:99:0,144,2633	0/0:44,0:44:99:0,120,2183	0/0:32,0:32:93.31:0,93,1703	0/0:24,0:24:72.25:0,72,1333	0/0:14,0:14:42.13:0,42,754	1/1:0,30:30:84.28:1237,84,0	0/0:29,0:29:87.29:0,87,1601	0/0:31,0:31:90.31:0,90,1685	0/0:20,0:20:51.16:0,51,892
chr10	76647607	.	TGA	T	629.74	PASS	AB=0.952;AC=9;AF=0.167;AN=54;BaseQRankSum=2.365;DP=472;FS=14.130;HRun=0;HaplotypeScore=83.1079;InbreedingCoeff=0.7525;MQ=71.03;MQ0=1;MQRankSum=-1.352;QD=9.54;ReadPosRankSum=0.201;VQSLOD=2.3529;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:12:20.91:198,21,0	0/0:7,0:7:9:0,9,100	0/1:19,1:17:16.10:16,0,251	0/0:13,0:11:6.34:0,6,126	0/0:22,0:22:20.47:0,20,197	0/0:19,0:19:29.79:0,30,327	0/0:17,0:17:17.52:0,18,202	0/0:24,0:24:48.28:0,48,502	0/0:14,0:14:42.13:0,42,580	1/1:4,1:5:9.02:102,9,0	1/1:2,1:11:8.97:89,9,0	0/0:30,0:30:81.22:0,81,1074	0/0:30,0:30:72.23:0,72,1001	0/0:22,0:22:16.43:0,16,249	0/0:31,0:31:56.44:0,56,606	1/1:13,2:18:36:379,36,0	0/0:13,0:12:14.71:0,15,102	0/0:6,0:6:9.51:0,10,91	0/0:20,0:20:38.90:0,39,395	0/0:12,0:12:9.64:0,10,139	0/0:18,0:18:38.93:0,39,369	0/0:15,0:15:42.09:0,42,537	0/0:18,0:18:54.08:0,54,647	0/0:26,0:26:69.21:0,69,988	./.	0/0:11,0:11:15.03:0,15,210	0/0:17,0:17:14.62:0,15,330	0/0:8,0:8:10.68:0,11,130
chr10	76647615	.	G	GGT	5148.32	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.511;DP=461;FS=24.260;HRun=0;HaplotypeScore=80.7051;InbreedingCoeff=0.9210;MQ=73.96;MQ0=1;MQRankSum=0.707;QD=38.14;ReadPosRankSum=10.356;VQSLOD=3.3936;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:38.85:0,39,320	0/0:6,0:6:12.02:0,12,137	0/0:19,0:16:39.31:0,39,410	0/0:18,0:14:26.08:0,26,242	0/0:23,0:23:35.96:0,36,315	0/0:19,0:19:42.34:0,42,439	0/0:14,0:14:31.53:0,32,264	0/0:25,0:25:40.71:0,41,396	1/1:0,15:16:39.13:644,39,0	0/0:11,0:11:17.92:0,18,156	0/0:9,0:9:6.01:0,6,63	1/1:4,26:31:69.20:1136,69,0	1/1:1,31:32:72.23:1187,72,0	0/0:18,0:19:6.69:0,7,319	0/0:24,0:24:36.93:0,37,405	0/0:16,0:16:31.84:0,32,293	0/0:11,0:10:19.45:0,19,147	0/0:6,0:6:14.99:0,15,128	0/0:15,0:15:32.71:0,33,271	0/0:12,0:12:29.81:0,30,252	0/0:19,0:19:44.96:0,45,411	1/1:0,14:14:30.10:495,30,0	1/1:2,11:13:36.11:592,36,0	1/1:0,29:29:66.23:1094,66,0	0/0:9,0:9:5.94:0,6,44	0/0:10,0:10:12.03:0,12,158	0/0:21,0:21:37.57:0,38,381	0/0:6,0:6:17.97:0,18,148
chr10	76648488	.	C	CTGGTGCT	44615.06	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.770;DP=680;FS=4.093;HRun=0;HaplotypeScore=131.7060;InbreedingCoeff=0.9326;MQ=75.23;MQ0=1;MQRankSum=-10.049;QD=70.37;ReadPosRankSum=5.761;VQSLOD=5.0837;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:39:57.20:2206,57,0	1/1:0,12:15:30.10:1114,30,0	0/0:23,0:23:53.33:0,53,1231	0/0:23,0:23:54.05:0,54,1116	1/1:0,30:33:75.10:2672,75,0	1/1:1,19:23:39.13:1554,39,0	1/1:1,15:18:15.05:598,15,0	1/1:3,26:39:99:3437,111,0	1/1:1,13:16:33.11:1310,33,0	1/1:3,30:36:90.31:3474,90,0	1/1:1,25:29:60.05:1981,60,0	1/1:4,25:35:48.16:1866,48,0	1/1:1,19:22:51.18:2025,51,0	1/1:3,19:25:48.16:1894,48,0	1/1:0,26:29:66.23:2627,66,0	1/1:1,19:24:48.16:1836,48,0	1/1:1,17:20:30:993,30,0	1/1:2,15:18:33.11:1259,33,0	1/1:1,12:16:45.14:1492,45,0	1/1:2,19:24:45.09:1688,45,0	1/1:5,13:24:18.06:717,18,0	1/1:1,15:16:42.10:1573,42,0	1/1:1,21:25:36.12:1395,36,0	1/1:2,11:18:18.06:634,18,0	1/1:1,16:22:39.13:1554,39,0	1/1:16,12:30:78.20:2554,78,0	1/1:1,24:27:51.17:1924,51,0	1/1:2,3:10:6:239,6,0
chr10	76649003	.	CT	C	492.37	PASS	AB=0.846;AC=7;AF=0.125;AN=56;BaseQRankSum=4.832;DP=448;FS=10.667;HRun=13;HaplotypeScore=50.8127;InbreedingCoeff=0.1505;MQ=68.23;MQ0=3;MQRankSum=0.492;QD=5.66;ReadPosRankSum=4.036;VQSLOD=0.9159;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,1:19:16.55:0,17,319	0/1:4,1:5:12.90:13,0,49	0/0:12,1:7:17.74:0,18,146	0/0:11,0:6:5.23:0,5,36	0/0:20,1:22:25.98:0,26,389	0/0:22,0:22:48.08:0,48,467	0/0:8,0:9:15.57:0,16,158	0/0:23,0:24:41.90:0,42,394	0/1:7,1:8:3.92:4,0,112	0/0:21,0:21:39.06:0,39,380	0/0:19,2:22:3.21:0,3,322	0/0:21,0:21:53.92:0,54,485	0/0:17,1:18:23.06:0,23,355	0/0:12,0:13:29.87:0,30,271	0/0:12,1:13:5.13:0,5,212	0/0:15,0:15:42.06:0,42,404	0/0:17,5:22:7.21:0,7,373	1/1:2,26:28:74.54:547,75,0	0/0:17,1:19:22.91:0,23,352	0/1:16,4:21:33.73:34,0,331	0/0:10,0:10:27.04:0,27,263	0/1:10,3:13:7.78:8,0,246	0/1:10,2:12:13.77:14,0,199	0/0:9,0:9:18:0,18,160	0/0:11,0:12:23.09:0,23,238	0/0:18,0:18:33.04:0,33,317	0/0:16,1:20:19.92:0,20,326	0/0:7,0:7:20.97:0,21,188
chr10	76649738	.	TCCACAAAGC	T	83.01	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.267;DP=715;FS=0.000;HRun=0;HaplotypeScore=193.0395;InbreedingCoeff=0.8753;MQ=87.56;MQ0=0;MQRankSum=-2.422;QD=6.39;ReadPosRankSum=0.586;VQSLOD=2.5028;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.26:0,96,3958	0/0:10,0:10:24.08:0,24,1128	0/0:30,0:30:51.16:0,51,2029	0/0:21,0:21:54.16:0,54,1951	0/0:26,0:26:66.21:0,66,2822	0/0:32,0:32:81.28:0,81,3758	0/0:22,0:22:60.19:0,60,2686	0/0:27,0:27:78.25:0,78,3104	0/0:20,0:20:51.17:0,51,2393	0/0:33,0:33:84.28:0,84,3781	0/0:20,0:20:57.20:0,57,2534	0/0:26,0:26:75.26:0,75,3480	0/0:26,0:26:72.23:0,72,3186	0/0:27,0:27:75.26:0,75,3384	0/0:34,0:34:93.31:0,93,4237	0/0:33,0:33:93.27:0,93,4023	0/0:27,0:27:72.25:0,72,3317	1/1:6,7:13:6.02:163,6,0	0/0:23,0:23:57.17:0,57,2417	0/0:40,0:40:99:0,117,5269	0/0:40,0:40:99:0,102,4509	0/0:27,0:27:75.24:0,75,3318	0/0:25,0:25:57.18:0,57,2495	0/0:14,0:14:36.12:0,36,1617	0/0:20,0:20:51.16:0,51,2156	0/0:23,0:23:63.21:0,63,2790	0/0:33,0:32:87.28:0,87,3659	0/0:8,0:8:18.06:0,18,846
chr10	76652752	.	A	AT	141.31	PASS	AB=0.815;AC=2;AF=0.036;AN=56;BaseQRankSum=5.941;DP=699;FS=0.000;HRun=0;HaplotypeScore=71.4571;InbreedingCoeff=-0.0393;MQ=73.73;MQ0=0;MQRankSum=5.923;QD=3.82;ReadPosRankSum=-2.379;VQSLOD=2.5313;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.31:0,93,1301	0/0:9,0:9:27.06:0,27,358	0/1:10,5:14:58.02:58,0,334	0/1:19,2:22:99:172,0,476	0/0:28,0:28:78.26:0,78,1091	0/0:28,0:28:84.27:0,84,1157	0/0:18,0:18:54.18:0,54,755	0/0:37,0:37:99:0,111,1518	0/0:28,0:28:84.28:0,84,1174	0/0:32,0:32:93.31:0,93,1301	0/0:19,0:19:57.19:0,57,797	0/0:27,0:27:81.27:0,81,1133	0/0:29,0:29:87.29:0,87,1215	0/0:19,0:19:54.18:0,54,755	0/0:36,0:36:99:0,108,1493	0/0:27,0:27:78.26:0,78,1090	0/0:26,0:26:78.26:0,78,1091	0/0:9,0:9:27.09:0,27,378	0/0:13,0:13:36.12:0,36,499	0/0:36,0:36:99:0,102,1391	0/0:23,0:23:66.21:0,66,906	0/0:35,0:35:99:0,105,1451	0/0:32,0:32:96.31:0,96,1325	0/0:25,0:25:75.19:0,75,1005	0/0:28,0:28:84.25:0,84,1140	0/0:34,0:34:99:0,102,1411	0/0:29,0:29:81.24:0,81,1095	0/0:3,0:3:9.03:0,9,126
chr10	76652893	.	CA	C	6345.56	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=13.069;DP=701;FS=2.511;HRun=9;HaplotypeScore=72.1920;InbreedingCoeff=0.9940;MQ=68.54;MQ0=0;MQRankSum=-1.101;QD=23.16;ReadPosRankSum=4.553;VQSLOD=5.6162;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:48.02:439,48,0	0/0:9,0:9:27.08:0,27,312	0/0:24,0:21:39.19:0,39,526	0/0:18,0:16:41.96:0,42,432	0/0:32,0:32:81.22:0,81,917	0/0:34,0:34:87.25:0,87,995	0/0:15,0:16:42.43:0,42,466	0/0:26,0:28:72.35:0,72,791	1/1:1,25:26:72.04:659,72,0	1/1:2,21:23:63.03:576,63,0	1/1:1,15:16:45.02:412,45,0	1/1:2,15:17:42.02:384,42,0	1/1:1,31:32:75.01:686,75,0	0/0:21,0:22:59.99:0,60,662	0/0:37,0:37:99:0,105,1204	1/1:0,24:24:63.03:577,63,0	0/0:20,0:20:54.16:0,54,623	0/0:19,0:19:57.14:0,57,641	0/0:22,0:24:62.76:0,63,656	0/0:23,0:23:63.18:0,63,718	0/0:31,0:31:93.26:0,93,1059	1/1:3,24:27:42.95:553,43,0	1/1:1,23:24:59.93:549,60,0	1/1:1,38:39:99:934,102,0	1/1:4,23:27:63.02:577,63,0	0/0:31,3:34:10.70:0,11,866	0/0:34,0:34:84.22:0,84,949	0/0:22,0:22:60.18:0,60,692
chr10	76655768	.	G	GT	224.46	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.564;DP=602;FS=0.000;HRun=9;HaplotypeScore=59.9657;InbreedingCoeff=0.8792;MQ=78.21;MQ0=0;MQRankSum=-0.662;QD=18.70;ReadPosRankSum=0.795;VQSLOD=3.7563;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:74.97:0,75,650	0/0:12,0:12:30.44:0,30,256	0/0:16,0:16:19.08:0,19,241	0/0:15,0:14:26.98:0,27,234	0/0:24,0:24:48.45:0,48,415	0/0:25,0:27:67.04:0,67,555	0/0:18,0:18:47.99:0,48,417	0/0:37,0:37:74.96:0,75,651	0/0:24,0:24:65.98:0,66,573	0/0:29,0:29:65.94:0,66,568	0/0:17,0:17:40.23:0,40,345	0/0:20,0:20:53.98:0,54,469	0/0:28,0:28:74.97:0,75,649	0/0:19,0:19:47.94:0,48,408	0/0:32,0:32:89.96:0,90,777	0/0:20,1:21:21.27:0,21,410	0/0:13,0:13:26.98:0,27,234	1/1:1,11:12:7.06:306,7,0	0/0:17,0:17:33.43:0,33,287	0/0:28,0:28:67.80:0,68,555	0/0:18,0:18:44.87:0,45,381	0/0:19,0:19:56.42:0,56,465	0/0:24,0:24:53.84:0,54,449	0/0:11,0:11:32.99:0,33,286	0/0:26,0:26:65.87:0,66,555	0/0:28,0:30:72.63:0,73,594	0/0:34,0:34:99:0,102,877	0/0:5,0:5:15:0,15,130
chr10	76658586	.	G	GA	2773.10	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=0.130;DP=499;FS=2.362;HRun=9;HaplotypeScore=56.4046;InbreedingCoeff=0.9372;MQ=65.05;MQ0=6;MQRankSum=-0.146;QD=14.29;ReadPosRankSum=2.082;VQSLOD=3.7193;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,33:37:66.14:714,66,0	0/0:7,0:7:15:0,15,130	0/0:13,0:10:26.11:0,26,190	0/0:15,0:11:12.95:0,13,182	0/0:29,0:29:77.97:0,78,672	0/0:11,0:12:35.03:0,35,293	0/0:22,0:20:50.58:0,51,442	0/0:31,0:31:77.95:0,78,674	1/1:0,6:6:12.03:133,12,0	1/1:1,0:18:45.33:243,45,0	1/1:2,0:15:29.82:141,30,0	1/1:1,8:9:15.04:166,15,0	1/1:2,14:16:30.08:328,30,0	0/0:21,0:21:50.98:0,51,442	0/0:22,0:22:47.94:0,48,412	1/1:2,1:15:31.53:180,32,0	0/0:25,0:25:59.98:0,60,521	1/1:4,16:21:23.79:246,24,0	0/0:22,0:22:59.90:0,60,511	0/0:14,0:13:29.98:0,30,260	0/0:24,0:25:60.97:0,61,492	1/1:0,2:2:3.01:33,3,0	1/1:3,11:14:18.05:196,18,0	1/1:2,16:19:38.94:412,39,0	1/1:1,1:21:37.10:204,37,0	0/0:26,0:26:42.76:0,43,454	0/0:19,0:19:47.49:0,47,412	0/0:1,0:1:3:0,3,26
chr10	76659855	.	CG	C	461.27	PASS	AB=0.917;AC=7;AF=0.125;AN=56;BaseQRankSum=2.859;DP=476;FS=3.116;HRun=1;HaplotypeScore=61.9992;InbreedingCoeff=0.3575;MQ=59.23;MQ0=20;MQRankSum=1.224;QD=6.59;ReadPosRankSum=-3.422;VQSLOD=-0.5505;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.17:0,87,1154	0/0:4,0:4:9.02:0,9,117	0/0:21,1:4:4.83:0,5,47	0/0:18,0:4:0.13:0,0,31	0/0:16,0:16:33.58:0,34,471	0/0:18,0:18:39.86:0,40,555	0/0:19,0:18:41.45:0,41,579	0/0:28,0:27:64.36:0,64,892	0/1:15,3:18:34.75:117,0,35	0/0:20,0:20:38.66:0,39,488	0/0:16,0:16:42.52:0,43,540	1/1:16,2:18:17.60:218,18,0	0/0:7,0:7:7.31:0,7,31	0/0:15,0:15:29.44:0,29,436	0/0:23,0:22:59.88:0,60,765	0/0:6,0:6:15.04:0,15,202	0/0:27,0:26:57.48:0,57,786	0/0:21,0:21:28.90:0,29,438	0/0:12,0:12:34.36:0,34,392	0/0:22,0:22:47.06:0,47,709	0/0:21,0:20:39.05:0,39,547	1/1:8,1:9:1.34:61,1,0	0/1:15,2:17:28.57:119,0,29	0/1:8,0:8:6.66:75,0,7	0/0:16,0:16:42.91:0,43,542	0/0:12,0:12:27.90:0,28,377	0/0:23,0:23:46.91:0,47,725	0/0:9,0:9:27.02:0,27,358
chr10	76660135	.	A	ATTTT	911.38	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.917;DP=730;FS=5.519;HRun=2;HaplotypeScore=118.5103;InbreedingCoeff=0.9988;MQ=82.11;MQ0=0;MQRankSum=-3.313;QD=60.76;ReadPosRankSum=1.601;VQSLOD=3.6186;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,2156	0/0:10,0:10:27.05:0,27,411	0/0:22,0:21:60.20:0,60,1080	0/0:30,0:30:77.65:0,78,1268	0/0:26,0:26:75.23:0,75,1340	0/0:26,0:26:72.23:0,72,1316	0/0:31,0:31:93.27:0,93,1645	0/0:35,0:35:96.31:0,96,1739	0/0:19,0:19:51.17:0,51,954	0/0:21,0:21:57.19:0,57,1067	0/0:24,0:24:69.22:0,69,1237	0/0:26,0:26:75.24:0,75,1373	0/0:24,0:24:69.24:0,69,1280	0/0:30,0:30:81.23:0,81,1422	0/0:35,0:35:99:0,105,1856	0/0:32,0:32:93.32:0,93,1736	0/0:27,0:27:69.21:0,69,1258	1/1:1,13:15:39.09:1006,39,0	0/0:22,0:22:54.43:0,54,1063	0/0:28,0:28:75.24:0,75,1368	0/0:51,0:51:99:0,151,2792	0/0:16,0:16:48.16:0,48,893	0/0:24,0:24:69.24:0,69,1292	0/0:24,0:24:69.24:0,69,1292	0/0:12,0:12:36.12:0,36,674	0/0:22,0:22:66.22:0,66,1201	0/0:38,0:38:99:0,108,1916	0/0:17,0:17:51.17:0,51,954
chr10	76663096	.	TTCTCTCTCTCTCTC	T	430.54	PASS	AB=0.917;AC=9;AF=0.167;AN=54;BaseQRankSum=5.381;DP=580;FS=1.211;HRun=0;HaplotypeScore=216.3816;InbreedingCoeff=0.6482;MQ=66.57;MQ0=10;MQRankSum=-3.990;QD=5.59;ReadPosRankSum=-0.509;VQSLOD=2.6998;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:21:6.02:147,6,0	0/0:8,0:8:18.06:0,18,1016	0/0:25,0:15:6.02:0,6,206	0/0:30,0:14:9.03:0,9,269	0/0:31,0:31:48.15:0,48,2083	0/0:25,0:27:39.13:0,39,2047	0/0:26,0:27:45.15:0,45,2050	0/0:44,0:44:42.14:0,42,1753	0/1:10,0:11:2:2,0,68	1/1:10,0:10:3.01:39,3,0	0/0:14,7:23:0.93:0,1,2	0/0:12,0:19:24.41:0,24,394	0/0:13,0:16:2.76:0,3,163	0/0:17,0:17:18.06:0,18,972	0/0:28,0:28:36.12:0,36,1906	1/1:7,11:18:11.92:274,12,0	0/0:15,0:20:36.12:0,36,1894	./.	0/0:17,0:17:27.09:0,27,1559	0/0:22,0:22:27.09:0,27,963	0/0:23,0:23:30.09:0,30,1414	0/0:9,0:9:7.74:0,8,139	0/0:13,0:18:20.98:0,21,230	0/0:12,0:14:15.05:0,15,344	1/1:13,1:16:3.01:98,3,0	0/0:24,0:24:36.12:0,36,2235	0/0:29,0:29:57.20:0,57,3128	0/0:20,0:20:27.09:0,27,1528
chr10	76663152	.	GTGTGTA	G	1303.88	PASS	AB=0.913;AC=13;AF=0.232;AN=56;BaseQRankSum=4.335;DP=599;FS=15.437;HRun=0;HaplotypeScore=167.0816;InbreedingCoeff=0.4830;MQ=57.87;MQ0=16;MQRankSum=-3.357;QD=6.90;ReadPosRankSum=-1.623;VQSLOD=1.6729;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:0.37:0,0,313	0/0:8,0:8:24.06:0,24,570	0/0:24,0:12:28.27:0,28,600	0/0:14,0:9:11:0,11,206	0/0:26,0:26:66.13:0,66,1681	0/0:32,0:32:78.10:0,78,1973	0/0:15,0:14:26.60:0,27,596	0/0:33,0:31:83.79:0,84,1688	1/1:2,19:21:8.80:131,9,0	0/0:22,0:22:9.42:0,9,764	0/1:27,0:27:42.71:43,0,542	1/1:1,21:22:17.97:392,18,0	1/1:3,17:20:29.45:535,29,0	0/0:17,0:17:45.09:0,45,1251	0/0:27,0:25:72.22:0,72,2056	0/1:25,0:25:71.63:72,0,403	0/0:24,0:23:41.09:0,41,1249	0/1:16,0:16:5.87:6,0,432	0/0:18,0:18:36.05:0,36,659	0/0:17,0:17:51.16:0,51,1528	0/0:18,0:18:35.09:0,35,891	0/1:4,14:16:0:0,0,0	1/1:3,17:20:11.89:263,12,0	0/0:1,13:14:0.47:0,0,1	0/1:20,0:19:25.50:26,0,323	0/0:24,0:24:61.23:0,61,1182	0/0:37,0:36:99:0,105,3056	0/0:3,0:2:6.02:0,6,177
chr10	76666812	.	TTGTGTG	T	580.63	PASS	AB=0.854;AC=7;AF=0.135;AN=52;BaseQRankSum=3.950;DP=597;FS=2.185;HRun=0;HaplotypeScore=142.9724;InbreedingCoeff=0.1604;MQ=60.12;MQ0=22;MQRankSum=-5.204;QD=4.54;ReadPosRankSum=0.277;VQSLOD=2.1363;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:38:6.02:82,6,0	0/0:6,0:6:12.04:0,12,210	./.	./.	0/0:23,0:23:33.08:0,33,782	0/0:27,0:28:38.94:0,39,866	0/0:18,0:21:12.04:0,12,257	0/0:24,0:24:10.91:0,11,64	0/0:16,0:16:9.48:0,9,243	0/1:23,2:25:8.89:73,0,9	0/1:13,3:18:9.82:144,0,10	0/0:14,0:14:11.96:0,12,209	0/0:18,0:19:18.06:0,18,458	0/0:17,0:18:21.07:0,21,486	0/0:25,0:26:10.30:0,10,1020	0/1:14,5:19:8.88:259,0,9	0/0:18,0:22:24.07:0,24,554	0/1:13,0:12:22.01:36,0,22	0/0:21,0:20:12.04:0,12,333	0/0:13,0:13:21.54:0,22,492	0/0:30,0:29:27.09:0,27,606	0/0:15,0:15:6.02:0,6,128	0/0:13,0:14:6.02:0,6,180	0/0:15,0:25:2.75:0,3,67	0/1:10,2:12:6.95:111,0,7	0/0:28,0:26:30.05:0,30,657	0/0:14,0:16:19.66:0,20,600	0/0:7,0:7:12.04:0,12,321
chr10	76667122	.	A	AAAC	11397.63	PASS	AB=0.923;AC=25;AF=0.446;AN=56;BaseQRankSum=-14.565;DP=581;FS=2.011;HRun=0;HaplotypeScore=75.1205;InbreedingCoeff=0.8880;MQ=71.66;MQ0=1;MQRankSum=-1.722;QD=39.30;ReadPosRankSum=4.113;VQSLOD=5.8082;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,20:26:39.13:806,39,0	0/0:4,0:4:12.04:0,12,177	0/0:12,0:12:20.91:0,21,236	0/0:14,0:13:0.77:0,1,106	0/0:19,0:19:45.11:0,45,606	0/0:20,0:20:48.11:0,48,668	0/0:14,0:14:36.11:0,36,515	0/0:37,0:37:84.26:0,84,1177	1/1:8,22:31:60.20:1237,60,0	1/1:7,19:27:66.10:1200,66,0	1/1:3,15:19:45.07:871,45,0	1/1:3,17:20:36.12:745,36,0	1/1:5,24:29:63.22:1302,63,0	0/0:17,0:17:39.10:0,39,554	0/0:32,0:32:84.27:0,84,1225	1/1:2,24:26:60.21:1241,60,0	0/0:32,0:32:84.27:0,84,1223	1/1:3,17:21:42.06:824,42,0	0/0:20,0:20:44.86:0,45,612	0/0:16,0:16:39.13:0,39,578	0/0:13,0:13:30.17:0,30,464	1/1:1,10:11:30.10:619,30,0	1/1:0,16:17:36.04:698,36,0	1/1:4,13:17:36.12:744,36,0	1/1:4,18:22:51.18:1049,51,0	0/1:22,2:24:60.92:61,0,730	0/0:33,0:33:87.22:0,87,1189	0/0:8,0:8:15.05:0,15,222
chr10	76667368	.	A	AT	5363.75	PASS	AB=0.926;AC=25;AF=0.446;AN=56;BaseQRankSum=-13.347;DP=519;FS=5.063;HRun=8;HaplotypeScore=47.3494;InbreedingCoeff=0.9155;MQ=73.33;MQ0=0;MQRankSum=-1.325;QD=23.63;ReadPosRankSum=3.519;VQSLOD=5.3994;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,33:37:84.25:968,84,0	0/0:11,0:11:27.01:0,27,247	0/0:14,0:13:19.83:0,20,146	0/0:6,0:5:6:0,6,54	0/0:21,0:21:60.03:0,60,549	0/0:19,0:19:39:0,39,357	0/0:20,0:20:57.02:0,57,517	0/0:36,0:36:93.03:0,93,847	1/1:2,13:15:36.11:415,36,0	1/1:3,15:18:42.11:474,42,0	1/1:1,13:14:39.07:435,39,0	1/1:2,15:17:39.12:450,39,0	1/1:2,14:16:30.08:346,30,0	0/0:15,0:15:42.02:0,42,384	0/0:18,0:18:51.03:0,51,466	1/1:0,11:11:27.08:312,27,0	0/0:23,0:23:57:0,57,516	1/1:3,16:19:39.12:450,39,0	0/0:29,0:29:65.99:0,66,593	0/0:20,0:20:53.99:0,54,487	0/0:25,0:25:59.99:0,60,540	1/1:1,5:6:14.98:156,15,0	1/1:1,12:13:24.07:277,24,0	1/1:0,17:17:45.13:519,45,0	1/1:2,17:19:48.14:554,48,0	0/1:23,2:25:6.21:6,0,459	0/0:28,0:28:69:0,69,625	0/0:7,0:7:9:0,9,82
chr10	76667710	.	T	TG	5066.39	PASS	AC=24;AF=0.545;AN=44;BaseQRankSum=2.137;DP=257;FS=13.981;HRun=3;HaplotypeScore=45.4316;InbreedingCoeff=0.9695;MQ=74.06;MQ0=3;MQRankSum=-1.969;QD=35.18;ReadPosRankSum=0.392;VQSLOD=3.6984;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:22:45.13:602,45,0	0/0:5,0:5:15.05:0,15,180	0/0:7,0:7:6.54:0,7,167	0/0:10,0:9:21.06:0,21,251	0/0:12,0:12:30.08:0,30,349	0/0:11,0:11:24.07:0,24,288	0/0:18,0:18:48.11:0,48,551	0/0:20,0:19:48.15:0,48,575	./.	1/1:1,12:13:36.12:497,36,0	1/1:0,9:9:27.09:378,27,0	./.	./.	0/0:5,0:5:15.05:0,15,180	0/0:9,0:9:21.02:0,21,236	1/1:0,6:6:18.06:251,18,0	0/0:15,0:15:42.07:0,42,476	1/1:0,17:17:39.13:540,39,0	1/1:2,10:12:30.10:417,30,0	1/1:0,6:6:17.97:226,18,0	1/1:2,15:16:45.15:627,45,0	./.	./.	./.	1/1:1,8:9:24.07:316,24,0	1/1:3,15:18:45.11:606,45,0	1/1:1,9:10:30.03:396,30,0	1/1:0,5:5:15.05:210,15,0
chr10	76669675	.	GA	G	1754.82	PASS	AB=0.923;AC=16;AF=0.286;AN=56;BaseQRankSum=2.956;DP=489;FS=0.923;HRun=11;HaplotypeScore=70.5219;InbreedingCoeff=0.7553;MQ=82.49;MQ0=5;MQRankSum=-0.591;QD=12.10;ReadPosRankSum=-0.042;VQSLOD=3.3713;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:25:40.52:0,41,599	0/0:7,0:7:21.04:0,21,216	0/0:53,2:28:13.53:0,14,210	0/0:41,1:19:17.34:0,17,96	0/0:19,1:21:23.31:0,23,437	0/0:10,1:12:11.21:0,11,295	0/0:11,0:11:30.08:0,30,320	0/1:21,1:22:6.84:7,0,318	0/0:9,0:9:17.99:0,18,170	0/0:3,0:14:40.36:0,40,231	0/0:3,0:15:40.26:0,40,240	0/0:12,1:13:8.40:0,8,269	0/0:10,0:10:30.06:0,30,311	0/0:10,0:10:25.86:0,26,252	0/1:7,1:8:27.84:28,0,139	0/0:1,0:9:20.11:0,20,110	0/0:20,3:23:1.83:0,2,423	1/1:0,9:9:20.98:172,21,0	1/1:4,15:18:35.87:310,36,0	1/1:3,15:19:11.21:292,11,0	1/1:4,9:13:23.25:196,23,0	0/0:17,0:17:21.40:0,21,350	0/0:14,0:14:36.09:0,36,384	0/0:17,2:19:20.47:0,20,423	0/0:1,0:18:39.84:0,40,200	1/1:4,19:23:43.58:427,44,0	1/1:2,13:15:32.95:271,33,0	1/1:2,14:17:6.02:245,6,0
chr10	76670636	.	T	TA	5790.61	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-14.399;DP=627;FS=0.726;HRun=3;HaplotypeScore=56.9195;InbreedingCoeff=0.9995;MQ=80.82;MQ0=0;MQRankSum=-2.211;QD=36.19;ReadPosRankSum=1.065;VQSLOD=5.3311;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1214	0/0:8,0:8:24.07:0,24,288	0/0:21,0:21:57.10:0,57,632	0/0:11,0:11:29.97:0,30,312	0/0:26,0:26:75.23:0,75,900	0/0:31,0:31:90.28:0,90,1076	0/0:12,0:12:36.10:0,36,422	0/0:28,0:28:84.24:0,84,988	0/0:23,0:23:69.21:0,69,828	0/0:29,0:29:75.22:0,75,892	0/0:21,0:21:63.19:0,63,747	0/0:20,0:20:60.17:0,60,709	0/0:22,0:22:63.15:0,63,714	0/0:25,0:25:72.22:0,72,864	0/0:23,0:23:69.21:0,69,827	0/0:21,0:21:63.18:0,63,744	0/0:16,0:16:42.13:0,42,504	1/1:1,18:19:54.18:756,54,0	1/1:1,21:22:60.17:816,60,0	1/1:5,23:28:66.18:902,66,0	1/1:2,15:17:39.13:546,39,0	0/0:25,0:25:69.21:0,69,827	0/0:21,0:21:51.16:0,51,612	0/0:16,0:16:45.14:0,45,540	0/0:34,0:34:99:0,102,1224	1/1:2,24:26:72.24:1007,72,0	1/1:1,33:34:84.28:1176,84,0	1/1:0,14:14:42.14:588,42,0
chr10	76672538	.	AAG	A	375.80	PASS	AB=0.956;AC=20;AF=0.370;AN=54;BaseQRankSum=0.229;DP=415;FS=8.089;HRun=0;HaplotypeScore=70.9944;InbreedingCoeff=-0.4494;MQ=32.65;MQ0=51;MQRankSum=0.225;QD=1.22;ReadPosRankSum=1.352;VQSLOD=0.6486;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,1:19:24.54:25,0,44	0/0:9,1:8:9.03:0,9,113	./.	0/0:15,0:1:2.96:0,3,19	0/1:24,0:21:57.62:58,0,74	0/1:12,0:11:20.91:29,0,21	0/1:8,3:10:1.90:2,0,44	0/1:16,1:15:22.65:23,0,166	0/0:9,0:7:1.59:0,2,46	0/1:21,0:20:2.18:2,0,207	0/1:25,3:25:78.69:79,0,140	0/1:12,0:10:14.36:58,0,14	0/1:7,1:6:6.27:6,0,14	1/1:8,0:7:5.46:45,5,0	0/1:11,0:9:0.65:1,0,74	0/1:13,2:13:31.52:32,0,64	0/1:18,0:14:46.36:46,0,76	0/1:18,0:8:13.27:13,0,20	0/1:19,0:17:45.24:45,0,147	0/1:14,0:12:12.72:13,0,67	0/0:6,0:4:5.56:0,6,35	0/1:10,1:8:23.46:23,0,100	0/0:18,0:18:8.66:0,9,218	0/0:10,0:5:0.83:0,1,46	0/0:13,0:12:15.16:0,15,103	0/0:21,0:20:0.80:0,1,182	0/1:25,0:24:1.75:2,0,70	0/1:8,0:4:12.82:13,0,16
chr10	76672539	.	AGAACC	A	1002.07	PASS	AB=0.933;AC=20;AF=0.370;AN=54;BaseQRankSum=1.662;DP=404;FS=17.854;HRun=0;HaplotypeScore=83.0899;InbreedingCoeff=-0.6173;MQ=33.00;MQ0=48;MQRankSum=-0.199;QD=3.35;ReadPosRankSum=0.954;VQSLOD=-0.0757;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:19:45.61:46,0,92	0/0:9,0:8:9.03:0,9,172	./.	0/0:13,2:1:3:0,3,25	0/1:21,0:19:44.33:44,0,189	0/1:9,0:10:3.15:3,0,150	0/0:10,0:9:11.52:0,12,177	0/1:16,1:15:20.09:20,0,262	0/1:9,0:7:29.09:29,0,59	0/0:19,0:20:10.71:0,11,358	0/1:24,0:25:75.08:75,0,173	0/1:12,0:10:41.30:68,0,41	0/1:7,0:6:25.47:25,0,30	0/1:8,0:7:22.16:60,0,22	0/0:12,0:10:22.61:0,23,270	0/1:14,0:13:87.33:87,0,129	0/1:18,0:14:72.87:73,0,166	0/1:17,1:8:36.55:143,0,37	0/1:12,6:17:99:190,0,200	0/1:13,0:12:99:105,0,101	0/1:6,0:4:14.83:15,0,39	0/1:10,0:8:8.34:8,0,147	0/1:16,1:18:26.32:26,0,306	0/1:9,0:5:30.48:30,0,71	0/0:13,0:12:7.50:0,7,81	0/0:19,0:18:1.68:0,2,307	0/1:12,13:24:80.91:83,0,81	0/1:7,0:4:18.60:19,0,30
chr10	76672543	.	CCA	C	135	PASS	AB=0.972;AC=12;AF=0.214;AN=56;BaseQRankSum=3.051;DP=419;FS=27.523;HRun=0;HaplotypeScore=72.1877;InbreedingCoeff=-0.2017;MQ=33.94;MQ0=47;MQRankSum=0.527;QD=0.78;ReadPosRankSum=0.921;VQSLOD=-0.1036;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:19:5.54:6,0,61	0/0:9,0:8:8.92:0,9,65	0/0:7,0:1:2.92:0,3,17	0/0:17,0:2:2.84:0,3,14	0/0:22,0:19:2.80:0,3,124	0/0:11,0:10:9.55:0,10,110	0/0:9,0:8:11.83:0,12,140	0/0:18,0:16:9.89:0,10,202	0/1:6,3:7:7.30:41,0,7	0/0:20,0:19:35.96:0,36,251	0/0:28,0:25:22.55:0,23,204	0/1:14,0:11:7.32:76,0,7	0/1:9,0:7:3.79:4,0,6	0/1:8,0:7:11.31:20,0,11	0/0:11,0:9:16.88:0,17,135	0/0:14,0:13:3.91:0,4,83	0/1:17,0:14:10.28:10,0,133	0/1:17,0:9:30.83:37,0,31	0/1:18,0:17:37.18:37,0,125	0/1:17,0:16:21.23:21,0,49	0/1:7,0:5:1.75:2,0,28	0/0:11,0:9:11.78:0,12,123	0/1:19,1:20:7.03:7,0,110	0/1:9,0:5:7.93:8,0,16	0/0:14,0:13:14.35:0,14,54	0/0:21,0:20:36.41:0,36,283	0/0:26,0:24:13:0,13,171	0/0:8,0:4:4.24:0,4,28
chr10	76672558	.	AAAAAAAC	A	825.31	PASS	AB=0.983;AC=15;AF=0.268;AN=56;BaseQRankSum=1.806;DP=457;FS=11.293;HRun=0;HaplotypeScore=104.2394;InbreedingCoeff=0.4274;MQ=42.46;MQ0=40;MQRankSum=-4.922;QD=5.26;ReadPosRankSum=1.837;VQSLOD=1.3212;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:19:11:0,11,93	0/0:9,0:8:9:0,9,124	0/0:16,0:6:14.54:0,15,145	0/0:26,0:6:14.01:0,14,97	0/0:27,0:24:42.84:0,43,901	0/0:10,0:9:14.66:0,15,157	0/0:11,0:10:15:0,15,266	0/0:23,0:21:24.29:0,24,391	0/1:7,0:7:7.08:7,0,40	0/0:21,0:20:17.36:0,17,140	0/1:25,0:22:5.07:5,0,43	0/0:11,0:9:15.44:0,15,313	0/0:9,0:8:4.73:0,5,106	0/0:10,0:9:18:0,18,294	0/0:11,0:9:27.07:0,27,532	0/0:15,0:13:6.73:0,7,114	0/0:22,0:20:27.79:0,28,604	1/1:17,0:11:10.68:99,11,0	1/1:18,0:16:3.66:170,4,0	1/1:17,1:17:26.66:297,27,0	1/1:7,0:5:6.48:82,6,0	0/1:9,0:8:2.07:2,0,108	0/0:25,0:24:41.64:0,42,708	0/0:10,0:6:10.26:0,10,109	0/0:19,0:18:1.32:0,1,106	0/1:20,2:21:40.77:191,0,41	0/1:25,0:23:64.85:83,0,65	1/1:8,1:6:7.98:52,8,0
chr10	76672559	.	AAAAAAC	A	1052.75	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=2.313;DP=457;FS=13.950;HRun=0;HaplotypeScore=96.9238;InbreedingCoeff=0.4802;MQ=42.66;MQ0=40;MQRankSum=-4.939;QD=5.29;ReadPosRankSum=3.168;VQSLOD=0.7776;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:19:6.21:0,6,67	0/0:9,0:8:8.80:0,9,99	0/0:16,0:6:14.54:0,15,145	0/0:26,0:6:11.66:0,12,89	0/0:27,0:24:38.32:0,38,765	0/0:10,0:9:8.99:0,9,116	0/0:11,0:10:15:0,15,231	0/0:22,0:20:22.24:0,22,342	0/0:7,0:7:4:0,4,23	0/1:22,0:21:16.38:16,0,125	0/1:25,0:23:24.13:63,0,24	0/0:11,0:9:21.19:0,21,236	0/0:9,0:8:8.98:0,9,98	0/0:10,0:9:18:0,18,264	0/0:11,0:9:27.04:0,27,436	0/1:15,0:13:24.30:24,0,71	0/0:22,0:20:33.04:0,33,523	1/1:15,2:11:11.40:156,11,0	1/1:18,0:16:15.01:181,15,0	1/1:17,1:17:24.93:328,25,0	1/1:7,0:5:6.01:68,6,0	0/0:9,0:8:5.62:0,6,96	0/0:23,0:22:44.74:0,45,538	0/0:10,0:6:8.77:0,9,68	0/1:19,0:18:55.44:55,0,77	1/1:22,1:22:18.03:224,18,0	1/1:25,0:23:0.81:64,1,0	1/1:7,2:6:3.01:53,3,0
chr10	76672564	.	AC	A	1549.90	PASS	AB=0.905;AC=25;AF=0.446;AN=56;BaseQRankSum=3.984;DP=434;FS=147.088;HRun=1;HaplotypeScore=63.2393;InbreedingCoeff=-0.1522;MQ=44.96;MQ0=25;MQRankSum=-7.072;QD=5.18;ReadPosRankSum=-0.900;VQSLOD=0.5197;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:20:2.70:3,0,75	0/1:9,0:8:10.58:11,0,26	0/0:17,1:8:4.24:0,4,115	0/0:28,0:7:7.86:0,8,85	0/0:27,0:24:3.72:0,4,306	0/1:7,0:6:6.23:6,0,60	0/0:10,0:10:17.62:0,18,128	0/1:9,11:19:90.24:110,0,90	0/1:5,2:7:4.01:35,0,4	0/1:19,0:19:2.48:2,0,192	0/1:19,1:18:68.75:69,0,69	0/1:11,1:10:34.49:34,0,55	0/1:5,5:9:27.52:45,0,28	0/1:8,0:7:1.31:1,0,87	0/1:9,3:10:85.61:86,0,97	0/0:13,1:12:10.21:0,10,121	0/0:19,0:19:18.92:0,19,212	1/1:11,1:10:23.21:140,23,0	1/1:17,0:15:32.86:225,33,0	1/1:16,2:17:42.35:279,42,0	1/1:7,0:5:8.95:68,9,0	0/1:9,1:9:37.81:60,0,38	0/1:21,3:23:99:118,0,176	0/1:9,1:8:23.08:23,0,41	0/0:19,0:18:24.15:0,24,162	0/1:25,0:24:11.65:294,0,12	0/1:19,2:19:25.96:102,0,26	0/1:8,0:5:3.88:4,0,13
chr10	76673888	.	A	AC	5584.14	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-0.574;DP=636;FS=2.808;HRun=1;HaplotypeScore=97.2558;InbreedingCoeff=0.9829;MQ=67.39;MQ0=4;MQRankSum=2.341;QD=13.75;ReadPosRankSum=2.842;VQSLOD=4.4472;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,3:34:72.62:471,73,0	0/0:15,0:14:27.83:0,28,243	0/0:22,0:10:12.63:0,13,79	0/0:32,0:18:21.07:0,21,228	0/0:28,0:28:69.26:0,69,634	0/0:22,0:22:60.84:0,61,517	0/0:17,0:17:39.71:0,40,376	0/0:29,0:30:56.60:0,57,478	1/1:1,2:16:11.81:104,12,0	1/1:24,0:24:55.10:421,55,0	1/1:18,0:18:44.42:314,44,0	1/1:2,1:24:22.11:170,22,0	1/1:1,2:19:19.38:160,19,0	0/0:21,0:21:38.93:0,39,378	0/0:18,0:19:38.55:0,39,320	1/1:24,1:25:53.72:322,54,0	0/0:23,0:22:46.86:0,47,438	1/1:5,21:27:21.53:448,22,0	1/1:5,12:16:28.75:292,29,0	1/1:5,20:27:45.20:392,45,0	1/1:10,3:13:28.58:258,29,0	1/1:2,24:29:64.16:523,64,0	1/1:2,2:32:34.43:264,34,0	1/1:3,11:18:14.85:151,15,0	1/1:18,1:19:39.94:332,40,0	1/1:7,17:26:51.89:413,52,0	1/1:3,21:27:41.19:424,41,0	1/1:2,7:9:14.05:126,14,0
chr10	76674188	.	T	TCAG	8203.10	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-13.380;DP=578;FS=0.372;HRun=0;HaplotypeScore=81.2569;InbreedingCoeff=0.9990;MQ=82.24;MQ0=0;MQRankSum=-3.477;QD=49.72;ReadPosRankSum=2.971;VQSLOD=6.8241;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.22:0,66,1056	0/0:7,0:7:21.07:0,21,343	0/0:18,0:18:37.78:0,38,669	0/0:14,0:14:42.07:0,42,620	0/0:22,0:22:66.21:0,66,1054	0/0:32,0:32:93.27:0,93,1483	0/0:14,0:14:39.13:0,39,637	0/0:24,0:24:60.19:0,60,954	0/0:14,0:14:42.14:0,42,686	0/0:27,0:27:78.27:0,78,1269	0/0:19,0:19:54.18:0,54,879	0/0:11,0:11:30.10:0,30,490	0/0:17,0:17:48.16:0,48,784	0/0:17,0:17:48.15:0,48,759	0/0:29,0:29:72.23:0,72,1152	0/0:19,0:19:51.14:0,51,805	0/0:13,0:13:39.13:0,39,632	1/1:1,12:13:33.11:737,33,0	1/1:4,13:17:39.13:858,39,0	1/1:3,31:35:78.27:1733,78,0	1/1:2,20:22:45.15:1005,45,0	0/0:18,0:18:48.15:0,48,760	0/0:30,0:30:84.24:0,84,1340	0/0:18,0:18:51.17:0,51,829	0/0:27,0:27:63.22:0,63,1029	1/1:5,14:20:51.15:1058,51,0	1/1:4,35:41:96.33:2142,96,0	1/1:0,17:17:30.10:669,30,0
chr10	76675619	.	G	GGAGGAAGAA	17047.72	PASS	AB=0.579;AC=34;AF=0.607;AN=56;BaseQRankSum=9.583;DP=570;FS=15.688;HRun=0;HaplotypeScore=187.2090;InbreedingCoeff=0.7748;MQ=53.05;MQ0=5;MQRankSum=-11.732;QD=41.78;ReadPosRankSum=-0.096;VQSLOD=3.3393;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,17:28:22.55:529,0,23	0/0:9,0:9:24.06:0,24,587	0/0:7,0:4:3.01:0,3,31	0/0:14,0:13:0.87:0,1,13	0/0:17,0:17:48.11:0,48,1290	0/0:18,0:18:42.13:0,42,1126	0/0:25,0:25:59.38:0,59,1274	0/0:21,0:19:48.13:0,48,982	1/1:25,0:26:54.18:1816,54,0	1/1:6,22:28:41.08:1037,41,0	1/1:3,17:21:21:752,21,0	1/1:25,0:25:72.24:1923,72,0	1/1:27,0:28:60.21:2015,60,0	0/0:16,0:16:45.15:0,45,1250	0/0:16,0:16:45.10:0,45,970	1/1:1,15:20:18.06:833,18,0	0/0:18,0:18:42.11:0,42,1043	1/1:13,0:16:14.20:394,14,0	1/1:9,0:9:15.32:128,15,0	1/1:10,0:28:71.81:1189,72,0	1/1:7,0:9:8.96:129,9,0	1/1:19,0:19:39:1137,39,0	1/1:19,0:19:39.13:1360,39,0	1/1:23,0:22:32.26:790,32,0	0/1:7,23:32:25.42:804,0,25	1/1:15,0:31:76.02:1130,76,0	1/1:23,0:36:64.13:907,64,0	1/1:7,0:8:21.80:175,22,0
chr10	76675631	.	GGAGGAAGAA	G	6967.53	PASS	AB=0.917;AC=18;AF=0.321;AN=56;BaseQRankSum=4.806;DP=560;FS=1.217;HRun=0;HaplotypeScore=210.3739;InbreedingCoeff=-0.5021;MQ=51.83;MQ0=7;MQRankSum=-12.819;QD=17.77;ReadPosRankSum=4.741;VQSLOD=3.6534;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:99:144,0,128	0/0:12,0:12:36.12:0,36,1478	0/0:4,0:1:3.01:0,3,31	0/0:7,0:5:0.87:0,1,13	0/0:19,0:19:57.14:0,57,2147	0/0:18,0:18:48.15:0,48,1962	0/0:25,0:25:71.40:0,71,2532	0/0:27,0:24:72.23:0,72,2069	0/1:6,13:24:99:995,0,389	0/1:20,0:20:99:156,0,510	0/1:19,0:19:99:105,0,342	0/1:15,9:26:99:1010,0,657	0/1:5,8:27:99:908,0,272	0/0:19,0:19:57.20:0,57,2212	0/0:16,0:16:45.11:0,45,1716	0/1:25,0:25:99:148,0,671	0/0:21,0:21:63.19:0,63,2256	0/1:16,0:15:99:179,0,226	0/1:8,0:6:82.65:83,0,114	0/1:30,1:31:99:511,0,846	0/1:8,0:8:49.82:50,0,263	0/1:3,5:19:99:453,0,189	0/1:2,7:19:99:956,0,110	0/1:17,4:21:99:511,0,298	0/1:31,0:32:99:164,0,540	0/1:31,0:31:99:375,0,1237	0/1:33,0:33:99:151,0,1434	0/1:9,0:9:67.70:68,0,231
chr10	76675652	.	GGAA	G	5456.59	PASS	AB=0.744;AC=21;AF=0.375;AN=56;BaseQRankSum=8.781;DP=553;FS=8.239;HRun=0;HaplotypeScore=148.6448;InbreedingCoeff=0.6168;MQ=48.05;MQ0=7;MQRankSum=-5.282;QD=21.65;ReadPosRankSum=6.559;VQSLOD=4.0382;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:29.93:0,30,397	0/0:15,0:15:39.13:0,39,784	0/0:9,0:4:11.87:0,12,181	0/0:11,0:5:11.80:0,12,210	0/0:23,0:22:60.12:0,60,951	0/0:18,0:18:45.07:0,45,825	0/0:26,0:26:66.08:0,66,1090	0/0:26,0:25:51.12:0,51,878	0/1:20,4:24:3.60:403,0,4	0/0:29,0:28:62.12:0,62,1103	0/0:17,0:17:33.11:0,33,611	0/1:12,11:23:13.98:432,0,14	1/1:23,4:27:0.93:397,1,0	0/0:19,0:19:45.14:0,45,908	0/0:14,0:14:39.12:0,39,737	0/0:24,0:24:45.09:0,45,799	0/0:23,0:23:63.13:0,63,1140	0/1:5,11:16:2.02:183,0,2	1/1:5,5:6:8.30:138,8,0	1/1:5,23:28:66.86:951,67,0	1/1:2,9:11:15.01:191,15,0	1/1:14,3:17:17.04:300,17,0	0/1:15,1:16:37.90:131,0,38	0/1:8,9:17:10.35:235,0,10	0/0:28,0:28:41.88:0,42,767	1/1:6,24:29:78.07:1042,78,0	1/1:3,24:27:66.13:919,66,0	1/1:1,5:6:9.03:135,9,0
chr10	76676573	.	AAAAC	A	6187.09	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.427;DP=705;FS=4.483;HRun=0;HaplotypeScore=125.1652;InbreedingCoeff=0.9811;MQ=79.01;MQ0=0;MQRankSum=-3.376;QD=38.67;ReadPosRankSum=3.984;VQSLOD=5.2665;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,35:40:72.24:1282,72,0	0/0:12,0:12:33.11:0,33,852	0/0:34,0:33:68.64:0,69,1567	0/0:37,0:36:89.97:0,90,2149	0/0:21,0:21:63.17:0,63,1550	0/0:19,0:19:54.19:0,54,1393	0/0:26,0:26:75.24:0,75,1770	0/0:26,0:26:78.27:0,78,1990	1/1:0,25:25:66.23:1174,66,0	0/0:30,0:30:81.28:0,81,2042	0/0:27,0:27:75.26:0,75,1871	1/1:3,11:14:27.09:481,27,0	1/1:3,20:23:56.84:1014,57,0	0/0:25,0:25:75.26:0,75,1878	0/0:40,0:40:99:0,105,2632	0/0:22,0:22:54.19:0,54,1394	0/0:34,0:34:90.31:0,90,2313	0/0:12,0:12:30.10:0,30,740	0/0:28,0:28:69.24:0,69,1676	0/0:24,0:24:69.23:0,69,1671	0/0:41,0:41:99:0,111,2779	1/1:2,10:12:6.23:419,6,0	1/1:1,12:13:33.08:588,33,0	1/1:4,29:33:69.71:1229,70,0	0/0:14,0:14:42.14:0,42,1084	0/0:31,0:31:84.28:0,84,2118	0/0:27,0:26:78.27:0,78,1996	0/0:15,0:15:45.15:0,45,1111
chr10	76676884	.	TA	T	2938.49	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=10.973;DP=591;FS=3.518;HRun=12;HaplotypeScore=72.6459;InbreedingCoeff=0.9063;MQ=75.69;MQ0=1;MQRankSum=-0.482;QD=10.88;ReadPosRankSum=3.940;VQSLOD=3.5026;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:71.47:0,71,691	0/0:10,0:11:26.89:0,27,258	0/1:37,0:26:10.48:10,0,110	0/0:30,0:21:20.83:0,21,180	0/0:26,1:28:47.95:0,48,637	0/0:17,0:17:35.09:0,35,336	0/0:12,0:13:32.90:0,33,319	0/0:35,1:37:54.73:0,55,711	0/0:13,1:14:12.82:0,13,305	1/1:2,0:32:57.70:165,58,0	1/1:1,0:14:24.44:70,24,0	0/0:16,0:16:39.07:0,39,390	0/0:21,0:22:54.37:0,54,519	0/0:16,0:16:31.88:0,32,309	0/0:18,2:20:4.62:0,5,406	1/1:5,1:27:39.64:129,40,0	0/0:21,0:22:56.75:0,57,536	1/1:4,14:18:41.83:325,42,0	1/1:3,24:27:70.29:553,70,0	1/1:5,19:24:56.76:441,57,0	1/1:1,6:7:17.93:139,18,0	0/0:21,0:21:48.95:0,49,477	0/0:19,0:20:53.93:0,54,525	0/0:6,0:6:18.03:0,18,180	1/1:2,0:19:26.46:77,26,0	1/1:2,16:19:52.84:400,53,0	1/1:5,24:28:41.27:504,41,0	1/1:0,17:17:44.83:348,45,0
chr10	76678198	.	C	CT	1578.14	PASS	AB=0.772;AC=35;AF=0.648;AN=54;BaseQRankSum=1.298;DP=327;FS=1.929;HRun=13;HaplotypeScore=44.3958;InbreedingCoeff=0.3264;MQ=62.85;MQ0=8;MQRankSum=1.446;QD=6.52;ReadPosRankSum=-1.225;VQSLOD=1.3628;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,11:26:9.06:315,9,0	0/0:0,0:1:2.04:0,2,6	1/1:11,0:7:3.35:26,3,0	0/1:8,0:6:3.95:4,0,18	0/0:6,0:8:7.90:0,8,47	0/0:13,0:15:33.78:0,34,217	0/1:9,2:10:12.97:13,0,67	0/1:32,1:33:15.09:15,0,190	0/1:9,5:13:8.53:72,0,9	0/1:3,5:7:5.60:86,0,6	1/1:3,3:6:9.01:83,9,0	1/1:8,5:13:26.67:215,27,0	1/1:4,5:9:17.14:179,17,0	0/0:8,0:8:8.74:0,9,60	0/0:11,0:11:23.75:0,24,164	0/1:4,7:11:5.57:97,0,6	0/0:37,1:36:53.78:0,54,480	1/1:5,0:10:21.50:116,21,0	1/1:10,1:13:8.99:54,9,0	1/1:2,0:4:8.72:57,9,0	1/1:0,1:5:5.68:29,6,0	./.	1/1:3,0:2:2.96:19,3,0	0/1:4,5:10:23.23:80,0,23	1/1:4,7:11:9.01:84,9,0	1/1:6,6:12:11.87:93,12,0	1/1:2,1:11:12.77:74,13,0	1/1:2,1:8:5.84:42,6,0
chr10	76679329	.	AAGAC	A	1840.88	PASS	AB=1.000;AC=27;AF=0.519;AN=52;BaseQRankSum=-2.565;DP=650;FS=7.996;HRun=0;HaplotypeScore=162.6098;InbreedingCoeff=0.7661;MQ=59.88;MQ0=8;MQRankSum=-0.713;QD=5.16;ReadPosRankSum=-3.346;VQSLOD=1.4036;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:55:66.29:0,66,643	1/1:11,0:11:17.89:138,18,0	./.	0/1:21,0:15:0.21:0,0,0	1/1:22,1:21:20.85:163,21,0	1/1:20,0:20:26.93:215,27,0	1/1:34,0:34:38.92:318,39,0	1/1:31,0:31:17.83:135,18,0	0/0:17,0:17:11.23:0,11,186	0/0:34,0:34:20.98:0,21,240	0/0:10,0:10:8.99:0,9,75	0/0:24,0:24:13.19:0,13,165	0/0:27,0:27:28.05:0,28,274	1/1:24,0:24:3.01:37,3,0	1/1:19,19:36:12.04:188,12,0	0/0:22,0:22:0.20:0,0,104	1/1:31,0:30:30.85:334,31,0	0/1:16,0:16:36.06:36,0,53	1/1:19,0:19:8.94:65,9,0	0/1:12,0:12:0:0,0,0	1/1:36,0:36:14.97:120,15,0	0/0:22,0:22:32.52:0,33,264	0/0:15,0:15:23.16:0,23,192	0/0:39,0:38:25.98:0,26,396	0/0:14,0:14:20.63:0,21,144	1/1:23,0:21:17.96:149,18,0	1/1:17,0:17:17.91:136,18,0	./.
chr10	76679363	.	GACAGAC	G	1530.68	PASS	AB=0.980;AC=18;AF=0.346;AN=52;BaseQRankSum=-1.834;DP=575;FS=34.626;HRun=0;HaplotypeScore=155.9562;InbreedingCoeff=-0.5401;MQ=49.34;MQ0=39;MQRankSum=0.076;QD=3.90;ReadPosRankSum=3.315;VQSLOD=1.1622;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:38:66.78:0,67,747	0/1:12,0:11:21.98:116,0,22	./.	./.	0/1:20,0:16:56.82:165,0,57	0/1:23,0:21:99:173,0,173	0/1:25,0:25:99:258,0,236	0/1:26,0:24:30.33:108,0,30	0/1:21,0:20:30.06:30,0,185	0/0:19,0:19:14.15:0,14,251	0/1:10,0:10:15.63:16,0,71	0/1:19,0:16:13.63:14,0,172	0/1:31,0:26:99:101,0,230	0/1:8,11:19:48.67:49,0,207	0/1:26,0:23:3.39:3,0,36	0/1:27,0:25:36.97:37,0,102	0/1:35,0:32:99:234,0,292	0/1:15,0:12:45.67:46,0,144	0/1:10,0:10:25.12:25,0,58	0/0:10,0:9:2.82:0,3,14	0/1:40,0:40:66.73:67,0,114	0/0:23,0:21:32.52:0,33,264	0/0:19,0:16:23.06:0,23,191	0/0:44,0:36:61.16:0,61,456	0/0:20,0:20:37.35:0,37,199	0/1:22,0:19:94.10:148,0,94	0/1:11,0:11:20.99:90,0,21	0/0:3,0:3:3:0,3,25
chr10	76679367	.	GACACAC	G	837.19	PASS	AB=0.932;AC=21;AF=0.404;AN=52;BaseQRankSum=4.445;DP=598;FS=4.772;HRun=0;HaplotypeScore=166.8434;InbreedingCoeff=0.6075;MQ=48.93;MQ0=42;MQRankSum=-0.081;QD=3.04;ReadPosRankSum=3.158;VQSLOD=1.8990;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:41:15.48:0,15,332	0/0:12,0:11:3.01:0,3,65	./.	./.	0/0:21,0:19:2.90:0,3,169	0/0:22,0:21:17.98:0,18,399	0/0:29,0:29:18.91:0,19,500	0/0:30,0:28:32.71:0,33,310	1/1:14,6:20:11.87:136,12,0	1/1:16,0:18:11.95:109,12,0	1/1:9,0:10:2.56:55,3,0	1/1:15,6:18:6.02:71,6,0	1/1:21,0:24:22.99:317,23,0	0/1:21,0:21:24.66:25,0,464	0/0:26,0:25:26.96:0,27,335	1/1:10,0:25:8.55:113,9,0	0/0:31,0:32:40.03:0,40,611	0/0:15,0:12:18:0,18,300	0/0:13,0:13:19.60:0,20,233	0/0:11,0:10:5.98:0,6,64	0/0:44,0:44:24.06:0,24,354	0/1:16,4:17:0.07:0,0,0	1/1:12,6:15:0.94:2,1,0	1/1:34,8:36:6.25:26,6,0	1/1:19,0:19:23.37:133,23,0	0/1:24,0:22:25.57:26,0,389	0/0:12,0:12:14.97:0,15,151	0/0:3,0:3:6:0,6,74
chr10	76681336	.	TAA	T	2366.70	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=7.789;DP=352;FS=7.763;HRun=15;HaplotypeScore=55.9057;InbreedingCoeff=0.8871;MQ=72.35;MQ0=2;MQRankSum=-3.129;QD=12.93;ReadPosRankSum=2.695;VQSLOD=2.2253;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,11:19:32.45:275,32,0	0/0:6,0:6:18.02:0,18,224	0/0:26,0:17:16.94:0,17,206	0/0:14,0:5:1.36:0,1,4	0/0:21,0:26:47.04:0,47,520	0/0:13,0:16:44.59:0,45,520	0/0:10,0:10:18.04:0,18,228	0/0:23,0:24:39.10:0,39,496	1/1:2,8:11:26.72:223,27,0	1/1:6,12:18:32.77:290,33,0	1/1:3,10:15:20.52:214,21,0	1/1:1,6:7:14.97:132,15,0	1/1:2,8:10:23.91:205,24,0	0/0:8,0:10:20.49:0,20,187	0/0:11,0:12:29.56:0,30,343	1/1:2,8:11:26.73:223,27,0	0/0:20,0:23:57.07:0,57,677	1/1:2,0:6:8.21:35,8,0	1/1:4,0:19:41.05:175,41,0	1/1:0,0:11:30.19:130,30,0	1/1:0,0:3:8.23:35,8,0	0/0:1,0:1:0:0,0,0	1/1:1,3:4:8.97:79,9,0	1/1:0,3:3:6:53,6,0	1/1:1,8:10:14.80:176,15,0	1/1:4,0:21:46.56:199,47,0	1/1:1,0:9:19.20:83,19,0	1/1:1,0:5:10.96:47,11,0
chr10	76681676	.	GGTGTGTGTGTGTGTGTGT	G	4373.93	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=6.775;DP=561;FS=0.702;HRun=0;HaplotypeScore=240.9649;InbreedingCoeff=0.8960;MQ=60.53;MQ0=11;MQRankSum=-6.609;QD=41.66;ReadPosRankSum=2.916;VQSLOD=3.8272;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,4:24:6.02:292,6,0	0/0:6,0:6:12.04:0,12,869	0/0:27,0:15:9.03:0,9,364	0/0:23,0:13:9.02:0,9,222	0/0:21,0:21:51.18:0,51,3805	0/0:27,0:27:51.18:0,51,3582	0/0:34,0:35:45.15:0,45,3195	0/0:33,0:33:32.70:0,33,1544	1/1:5,8:13:18.06:878,18,0	0/0:22,0:21:36.12:0,36,2274	0/0:15,0:17:30.10:0,30,1912	1/1:6,7:14:30.10:1343,30,0	1/1:9,2:12:12.04:565,12,0	0/0:16,0:16:33.11:0,33,2379	0/0:25,0:27:48.15:0,48,3713	0/0:20,0:20:42.14:0,42,3468	0/0:13,0:16:33.11:0,33,2081	0/0:10,0:14:18.06:0,18,989	0/0:27,0:30:42.10:0,42,2505	0/0:10,0:16:20.95:0,21,1501	0/0:19,0:29:21.66:0,22,1188	1/1:11,4:16:15.05:605,15,0	1/1:5,5:12:12.04:544,12,0	1/1:11,3:14:3.01:146,3,0	0/0:15,0:18:27.09:0,27,2048	0/0:15,0:24:30.78:0,31,2415	0/0:15,0:21:29.05:0,29,1777	0/0:9,0:9:12.04:0,12,875
chr10	76681747	.	CCTGT	C	2223.95	PASS	AB=0.924;AC=14;AF=0.250;AN=56;BaseQRankSum=8.025;DP=589;FS=0.000;HRun=0;HaplotypeScore=123.2066;InbreedingCoeff=0.8024;MQ=56.05;MQ0=9;MQRankSum=-0.164;QD=15.55;ReadPosRankSum=3.104;VQSLOD=3.3595;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:59.90:0,60,1038	0/0:9,0:9:21.05:0,21,463	0/0:33,0:18:17.80:0,18,276	0/0:33,0:26:33.31:0,33,537	0/0:26,1:27:13.84:0,14,1116	0/0:29,0:29:69.15:0,69,1397	0/0:21,0:21:39.12:0,39,896	0/0:29,0:29:60.12:0,60,874	1/1:10,8:18:29.87:403,30,0	0/0:24,0:24:54.14:0,54,972	0/0:14,0:13:23.92:0,24,419	1/1:6,24:30:38.98:641,39,0	1/1:0,20:20:33.11:529,33,0	0/0:14,0:13:33.07:0,33,611	0/0:29,0:29:72.10:0,72,1409	0/0:17,0:17:36.08:0,36,753	0/1:17,1:18:4.21:4,0,881	0/0:12,0:12:18.06:0,18,414	0/0:18,0:18:27.05:0,27,483	0/0:16,0:16:45.13:0,45,918	0/0:30,0:30:42.14:0,42,1121	1/1:6,20:26:30.10:491,30,0	1/1:12,1:13:20.83:213,21,0	1/1:6,3:9:5.70:98,6,0	0/0:16,0:16:42.11:0,42,787	0/0:24,0:24:66.14:0,66,1111	0/0:19,0:19:54.17:0,54,1268	0/1:8,1:8:31.32:31,0,245
chr10	76682368	.	TAA	T	1456.53	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=3.684;DP=267;FS=0.000;HRun=13;HaplotypeScore=31.6404;InbreedingCoeff=0.7112;MQ=56.15;MQ0=11;MQRankSum=0.850;QD=16.37;ReadPosRankSum=1.392;VQSLOD=1.2895;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:20:36.02:0,36,334	0/0:1,0:1:3.01:0,3,43	0/1:3,0:2:11.20:11,0,38	./.	0/0:16,0:15:30.10:0,30,433	0/0:12,1:12:4.02:0,4,387	0/0:3,0:3:6.02:0,6,86	0/0:28,0:29:67.64:0,68,842	0/0:3,0:3:9.03:0,9,130	0/0:3,0:10:27.02:0,27,268	0/0:3,0:6:15.02:0,15,140	0/0:5,0:4:12.04:0,12,174	0/0:5,0:5:15.01:0,15,193	0/0:4,0:4:2.97:0,3,20	0/0:5,0:5:8.99:0,9,106	0/0:1,0:6:6.01:0,6,57	0/0:29,0:28:75.24:0,75,1062	1/1:2,11:13:33.01:320,33,0	1/1:3,14:18:41.50:373,41,0	1/1:3,5:7:15.01:145,15,0	1/1:1,2:3:6:58,6,0	0/0:2,0:2:6.02:0,6,87	0/0:3,0:3:6.02:0,6,87	0/0:5,0:5:15.05:0,15,217	0/0:4,0:7:16.75:0,17,162	1/1:5,12:17:35.96:343,36,0	1/1:2,12:14:27.04:262,27,0	1/1:3,7:9:14.72:128,15,0
chr10	76682844	.	ATAT	A	1928.67	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=-1.568;DP=424;FS=0.505;HRun=0;HaplotypeScore=71.3942;InbreedingCoeff=0.1954;MQ=78.91;MQ0=7;MQRankSum=3.036;QD=9.32;ReadPosRankSum=-1.058;VQSLOD=2.3398;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:27.12:174,27,0	0/0:5,0:5:15.03:0,15,187	0/0:56,0:23:26.89:0,27,288	0/0:50,0:21:17.08:0,17,188	0/0:28,0:28:69.98:0,70,826	0/0:4,0:4:11.73:0,12,115	0/0:4,0:4:4.11:0,4,50	0/0:28,0:29:69.01:0,69,713	1/1:9,0:9:23.21:187,23,0	0/1:15,0:15:29.71:135,0,30	0/1:21,0:21:59.66:100,0,60	1/1:7,1:8:19.35:160,19,0	1/1:0,7:8:5.98:65,6,0	0/0:14,0:14:42:0,42,562	0/0:10,0:10:30.10:0,30,435	0/1:13,0:13:17.56:18,0,90	0/0:10,0:10:26.37:0,26,307	0/1:10,0:10:34.78:87,0,35	0/1:13,0:12:37.26:140,0,37	0/1:14,0:14:78.54:115,0,79	0/0:6,0:6:10.27:0,10,42	1/1:6,2:8:16.77:126,17,0	1/1:9,3:13:29.23:266,29,0	1/1:0,7:7:3.01:50,3,0	0/1:11,0:11:29.58:123,0,30	0/1:16,0:16:35.21:156,0,35	0/1:14,0:20:94.77:112,0,95	0/1:9,0:9:18.22:105,0,18
chr10	76682845	.	TA	T	3675.98	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=0.285;DP=430;FS=0.000;HRun=1;HaplotypeScore=56.7285;InbreedingCoeff=0.9147;MQ=79.11;MQ0=7;MQRankSum=-2.490;QD=17.26;ReadPosRankSum=0.284;VQSLOD=3.6013;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:29.94:251,30,0	0/0:5,0:5:14.30:0,14,91	0/0:56,0:22:25.30:0,25,220	0/0:52,0:22:19.11:0,19,158	0/0:30,0:30:55.77:0,56,533	0/0:4,0:4:11.89:0,12,94	0/0:4,0:4:8.26:0,8,50	0/0:29,0:29:71.60:0,72,568	1/1:9,0:9:24.45:208,24,0	1/1:14,1:15:39.95:338,40,0	1/1:21,0:21:43.53:309,44,0	1/1:9,0:9:23.91:211,24,0	1/1:8,0:8:5.96:45,6,0	0/0:15,0:15:41.88:0,42,369	0/0:10,0:10:29.97:0,30,253	1/1:12,1:13:31.33:216,31,0	0/0:12,0:12:5.42:0,5,163	1/1:10,0:10:20.94:134,21,0	1/1:13,0:12:29.98:234,30,0	1/1:13,1:14:34.18:210,34,0	1/1:7,0:7:12:69,12,0	1/1:8,0:8:18.37:147,18,0	1/1:13,0:13:30.42:256,30,0	1/1:7,0:7:3:29,3,0	1/1:11,0:11:31.68:240,32,0	1/1:14,1:15:39.91:323,40,0	1/1:18,0:18:39.30:272,39,0	1/1:9,0:9:22.51:183,23,0
chr10	76684856	.	C	CCACACACACACACA	4710.76	PASS	AB=1.000;AC=34;AF=0.654;AN=52;BaseQRankSum=6.174;DP=423;FS=13.944;HRun=0;HaplotypeScore=165.8635;InbreedingCoeff=0.4952;MQ=65.07;MQ0=9;MQRankSum=-5.650;QD=18.33;ReadPosRankSum=-3.830;VQSLOD=2.0214;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:11.95:0,12,385	0/0:4,0:3:6.02:0,6,167	./.	0/0:28,0:23:3.01:0,3,67	0/0:14,0:14:18.06:0,18,595	0/0:16,0:16:5.60:0,6,274	0/1:20,0:20:2.20:2,0,547	0/0:24,0:24:29.91:0,30,706	1/1:15,0:12:6.02:266,6,0	1/1:15,1:15:27.09:1034,27,0	./.	1/1:7,0:6:6.02:172,6,0	1/1:13,0:11:8.81:231,9,0	0/1:15,0:15:24.75:25,0,512	0/0:18,0:18:24.08:0,24,889	1/1:10,0:9:12.03:384,12,0	0/1:14,0:14:72.67:73,0,637	1/1:5,4:11:6.02:276,6,0	1/1:14,0:13:12:434,12,0	1/1:12,0:11:6.02:137,6,0	1/1:10,0:7:2.94:18,3,0	0/1:15,0:15:0:0,0,0	1/1:14,0:12:3.01:62,3,0	1/1:21,0:21:3.94:61,4,0	1/1:13,0:12:3.88:26,4,0	1/1:9,4:13:24.08:822,24,0	1/1:12,0:17:14.82:386,15,0	1/1:6,0:3:9.03:302,9,0
chr10	76684885	.	C	CAGAGAGAGAGAG	1161.11	PASS	AB=0.991;AC=10;AF=0.179;AN=56;BaseQRankSum=4.195;DP=420;FS=16.025;HRun=0;HaplotypeScore=163.9670;InbreedingCoeff=0.1193;MQ=42.52;MQ0=16;MQRankSum=-4.731;QD=9.60;ReadPosRankSum=1.776;VQSLOD=1.9664;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,2:18:4.29:0,4,27	0/0:5,0:4:12.01:0,12,213	0/0:5,0:1:2.97:0,3,20	0/0:14,0:8:1.95:0,2,44	0/0:25,0:25:54.04:0,54,1428	0/1:18,0:18:3.20:3,0,1017	0/0:17,0:17:38.78:0,39,731	0/0:32,0:29:77.50:0,77,799	0/0:16,0:13:14.70:0,15,439	0/1:17,0:16:59.21:59,0,454	0/0:11,0:8:5.39:0,5,125	0/0:5,0:4:9.03:0,9,307	0/1:16,0:13:17.90:18,0,357	0/0:20,0:19:8.99:0,9,327	0/0:18,0:18:45.63:0,46,1311	0/0:12,0:11:5.95:0,6,166	0/0:17,0:17:44.28:0,44,1096	0/0:10,0:10:6.64:0,7,198	0/1:12,0:11:64.96:101,0,65	0/1:16,0:15:13.30:13,0,60	0/0:7,0:3:3.88:0,4,26	0/0:16,0:15:14.96:0,15,439	0/0:18,0:16:20.70:0,21,534	0/0:16,0:16:9.03:0,9,211	0/0:15,0:14:16.56:0,17,283	1/1:16,0:16:19.80:545,20,0	0/1:16,0:17:43.98:474,0,44	1/1:9,0:5:6:90,6,0
chr10	76684887	.	CAG	C	369.46	PASS	AB=1.000;AC=21;AF=0.389;AN=54;BaseQRankSum=3.021;DP=439;FS=9.139;HRun=0;HaplotypeScore=98.7313;InbreedingCoeff=0.4062;MQ=41.53;MQ0=15;MQRankSum=3.896;QD=1.76;ReadPosRankSum=-0.630;VQSLOD=1.3175;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:8.55:0,9,54	0/0:5,0:4:5.98:0,6,47	0/0:9,0:2:2.50:0,2,9	0/0:17,0:7:11.33:0,11,87	0/0:25,0:25:24.67:0,25,283	0/0:15,0:15:2.55:0,3,189	0/1:18,0:18:3.69:4,0,127	0/1:32,0:29:13.54:14,0,117	1/1:16,0:13:9.29:55,9,0	0/1:18,0:17:15.94:47,0,16	1/1:10,1:8:3.36:17,3,0	1/1:4,1:4:8.78:52,9,0	0/1:16,0:13:15.64:17,0,16	0/0:21,0:20:14.08:0,14,111	0/0:17,0:17:3.34:0,3,187	1/1:12,0:11:3.82:23,4,0	0/1:17,0:17:14.36:14,0,159	0/0:11,0:10:4.53:0,5,52	0/0:20,0:18:27.54:0,28,191	0/0:17,0:16:6.04:0,6,38	./.	1/1:15,0:15:11.72:70,12,0	1/1:16,1:16:17.53:113,18,0	1/1:14,2:16:5.83:33,6,0	1/1:16,0:15:11.91:85,12,0	0/0:18,0:18:40.07:0,40,260	0/0:21,0:21:28.99:0,29,213	0/0:10,0:6:11.70:0,12,79
chr10	76687687	.	T	TGG	63.58	PASS	AB=0.948;AC=6;AF=0.111;AN=54;BaseQRankSum=1.201;DP=427;FS=17.099;HRun=0;HaplotypeScore=75.9295;InbreedingCoeff=-0.1244;MQ=39.81;MQ0=29;MQRankSum=0.486;QD=0.53;ReadPosRankSum=-0.073;VQSLOD=-0.2242;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:59.19:0,59,648	0/0:4,0:4:12.01:0,12,124	0/0:26,0:6:6.75:0,7,43	0/1:34,0:7:1.55:2,0,28	0/0:17,0:16:32.66:0,33,376	0/0:15,0:13:39.08:0,39,470	0/0:8,0:6:18.05:0,18,219	0/0:24,0:21:60.13:0,60,737	0/0:16,0:16:45.10:0,45,524	0/0:27,0:23:63.18:0,63,769	0/0:15,0:15:38.56:0,39,409	0/0:7,0:7:18.04:0,18,197	0/0:9,0:8:24.04:0,24,265	0/0:17,0:16:45:0,45,479	0/0:12,0:9:27.05:0,27,323	0/0:12,0:11:33.10:0,33,435	0/0:13,0:13:33.04:0,33,369	0/1:17,0:17:9.64:10,0,253	0/0:10,0:9:26.22:0,26,240	0/1:13,0:12:29.55:30,0,245	./.	0/0:7,0:5:9.03:0,9,112	0/0:16,0:16:42.02:0,42,451	0/0:7,0:6:8.82:0,9,106	0/0:17,0:15:36.11:0,36,457	0/1:12,1:9:56.16:56,0,160	0/1:26,0:24:31.19:31,0,385	0/1:11,5:11:50.14:50,0,60
chr10	76688040	.	A	AAG	558.58	PASS	AB=0.929;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.761;DP=558;FS=3.654;HRun=0;HaplotypeScore=69.4008;InbreedingCoeff=0.6740;MQ=50.12;MQ0=47;MQRankSum=3.506;QD=7.55;ReadPosRankSum=2.902;VQSLOD=2.8927;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:19:43.89:0,44,301	0/0:4,0:4:8.03:0,8,56	0/0:75,0:14:20.98:0,21,154	0/0:72,0:12:19.45:0,19,129	0/0:22,0:22:64.59:0,65,454	0/0:15,0:14:31.68:0,32,220	0/0:6,0:6:14.90:0,15,112	0/0:28,0:23:53.06:0,53,380	0/0:14,0:14:33.65:0,34,245	1/1:5,14:22:19.32:327,19,0	1/1:4,10:16:5.64:115,6,0	0/0:19,0:15:39.59:0,40,261	0/0:14,0:14:36.50:0,36,240	0/0:12,0:11:19.92:0,20,131	0/0:15,0:14:38.38:0,38,279	0/1:12,1:12:27.23:147,0,27	0/0:26,0:25:58.92:0,59,436	0/0:26,0:21:54.31:0,54,400	0/0:15,0:10:28.63:0,29,203	0/0:17,0:15:36.58:0,37,267	0/0:7,0:7:10.64:0,11,72	0/0:3,0:3:5.95:0,6,42	0/0:11,0:11:21.94:0,22,127	0/0:11,0:8:10.48:0,10,68	1/1:2,9:18:5.48:101,5,0	0/0:16,0:16:44.34:0,44,331	0/0:17,0:17:23.18:0,23,166	0/0:16,0:9:19.25:0,19,120
chr10	76690984	.	G	GA	3918.82	PASS	AB=0.598;AC=30;AF=0.536;AN=56;BaseQRankSum=-7.226;DP=363;FS=28.005;HRun=10;HaplotypeScore=46.1949;InbreedingCoeff=0.7150;MQ=89.84;MQ0=4;MQRankSum=-0.350;QD=23.61;ReadPosRankSum=1.266;VQSLOD=2.2532;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:19:20.45:414,20,0	0/0:4,0:4:11.98:0,12,97	0/0:39,0:24:9.16:0,9,199	0/0:40,0:23:13.10:0,13,148	0/0:14,0:17:42.97:0,43,324	0/0:12,0:12:29.95:0,30,246	0/0:5,0:5:11.97:0,12,96	0/0:32,1:34:41.89:0,42,528	0/1:2,5:7:3.64:156,0,4	1/1:1,10:11:24.06:255,24,0	1/1:1,4:5:12.03:128,12,0	1/1:0,6:6:18.05:192,18,0	1/1:0,9:9:15.04:160,15,0	0/0:5,0:5:14.98:0,15,122	0/0:7,0:7:17.96:0,18,146	1/1:1,5:6:18.04:190,18,0	0/0:17,0:17:41.92:0,42,341	0/1:4,6:10:3.54:171,0,4	1/1:6,19:25:32.27:519,32,0	0/1:2,4:6:9.60:113,0,10	0/1:2,4:7:6.74:124,0,7	1/1:0,3:3:9.02:96,9,0	1/1:0,4:4:12.03:128,12,0	1/1:0,3:2:9.02:96,9,0	0/0:15,1:16:9.95:0,10,288	1/1:1,13:14:39.10:416,39,0	1/1:1,18:20:38.25:442,38,0	1/1:0,11:11:30.08:320,30,0
chr10	76691912	.	TACAA	T	5360.68	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=8.930;DP=709;FS=0.389;HRun=0;HaplotypeScore=155.7605;InbreedingCoeff=0.9365;MQ=60.68;MQ0=3;MQRankSum=-1.326;QD=19.08;ReadPosRankSum=4.818;VQSLOD=4.0980;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,108,2470	0/0:12,0:12:27.09:0,27,652	0/0:33,0:28:29.31:0,29,634	0/0:35,0:31:30.10:0,30,704	0/0:21,0:21:42.14:0,42,1014	0/0:22,0:22:54.19:0,54,1305	0/0:38,0:38:69.22:0,69,1579	0/0:32,0:32:42.14:0,42,977	1/1:10,0:27:30.51:281,31,0	0/0:22,0:35:69.21:0,69,1245	0/0:10,0:19:42.01:0,42,612	1/1:8,0:22:42.05:391,42,0	1/1:8,0:26:42.05:391,42,0	0/0:15,0:15:39.13:0,39,891	0/0:32,0:32:69.24:0,69,1636	0/0:16,0:32:63.22:0,63,1140	0/0:29,0:29:48.12:0,48,1098	1/1:8,7:15:21.07:339,21,0	1/1:14,10:22:30.10:466,30,0	1/1:7,14:21:42.10:650,42,0	1/1:16,21:37:54.18:873,54,0	1/1:3,0:17:9.01:85,9,0	1/1:5,0:17:2.84:29,3,0	1/1:9,0:15:2.08:26,2,0	0/0:10,0:22:42.12:0,42,682	1/1:9,13:22:36.12:581,36,0	1/1:6,25:31:61.77:1006,62,0	1/1:2,5:7:15.05:242,15,0
chr10	76692336	.	CCATA	C	8090.44	PASS	AB=0.536;AC=13;AF=0.232;AN=56;BaseQRankSum=15.411;DP=639;FS=1.529;HRun=0;HaplotypeScore=106.2627;InbreedingCoeff=0.8877;MQ=84.87;MQ0=1;MQRankSum=-6.704;QD=48.74;ReadPosRankSum=1.280;VQSLOD=5.3927;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.32:0,93,2545	0/0:11,0:11:33.11:0,33,904	0/0:23,0:23:63.59:0,64,1525	0/0:19,0:19:54.15:0,54,1311	0/0:21,0:21:63.22:0,63,1725	0/0:25,0:25:72.25:0,72,1970	0/0:23,0:23:66.23:0,66,1808	0/0:21,0:21:63.21:0,63,1588	0/0:23,0:23:69.22:0,69,1826	0/0:28,0:28:84.28:0,84,2205	0/0:24,0:24:72.24:0,72,1915	0/0:22,0:22:66.23:0,66,1772	0/0:30,0:30:87.30:0,87,2286	0/0:18,0:18:51.18:0,51,1385	0/0:30,0:30:84.29:0,84,2268	0/0:18,0:18:54.19:0,54,1479	0/0:23,0:23:69.24:0,69,1889	1/1:0,10:10:27.09:523,27,0	1/1:1,27:28:81.25:1441,81,0	1/1:0,39:39:99:2054,108,0	1/1:1,26:26:57.12:1066,57,0	0/0:18,0:18:51.18:0,51,1385	0/0:21,0:21:63.20:0,63,1597	0/0:10,0:10:30.10:0,30,787	0/0:32,0:32:93.31:0,93,2453	0/1:4,26:30:80.15:1379,0,80	1/1:1,28:29:75.26:1452,75,0	1/1:0,3:3:9.03:174,9,0
chr10	76693841	.	AGT	A	730.27	PASS	AB=0.909;AC=22;AF=0.440;AN=50;BaseQRankSum=2.175;DP=272;FS=54.904;HRun=0;HaplotypeScore=60.9784;InbreedingCoeff=0.3286;MQ=47.77;MQ0=9;MQRankSum=0.613;QD=4.65;ReadPosRankSum=-1.031;VQSLOD=0.2775;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:3.01:0,3,31	0/0:6,0:6:9.03:0,9,136	0/0:30,0:8:2.97:0,3,20	0/1:28,0:5:0:0,0,0	0/1:10,2:12:33.89:59,0,34	0/0:8,0:7:9.03:0,9,138	0/1:14,2:16:44.30:44,0,228	0/1:24,4:27:29.12:29,0,444	./.	0/0:8,0:7:8.95:0,9,68	./.	1/1:4,0:3:0.47:1,0,0	./.	0/1:4,1:5:28.17:28,0,40	0/0:4,0:4:3.01:0,3,46	0/0:2,0:1:3:0,3,26	0/0:14,0:13:27.06:0,27,390	1/1:0,7:6:6.02:68,6,0	1/1:9,2:13:13.40:114,13,0	1/1:5,7:12:12.03:137,12,0	1/1:1,0:2:2.84:14,3,0	0/1:5,0:4:0.02:0,0,0	0/0:2,0:2:3:0,3,26	0/0:7,0:6:6:0,6,54	0/0:4,0:4:6:0,6,52	1/1:3,2:4:5.85:47,6,0	1/1:4,6:9:15.04:171,15,0	1/1:3,5:6:15.04:171,15,0
chr10	76695408	.	C	CAGAT	7849.14	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-12.347;DP=544;FS=10.484;HRun=0;HaplotypeScore=88.3388;InbreedingCoeff=0.9931;MQ=73.51;MQ0=1;MQRankSum=-5.829;QD=63.81;ReadPosRankSum=3.958;VQSLOD=6.8052;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.25:0,72,1344	0/0:7,0:7:18.06:0,18,336	0/0:14,0:14:27.09:0,27,489	0/0:6,0:6:15.05:0,15,263	0/0:25,0:25:72.25:0,72,1332	0/0:8,0:8:24.08:0,24,437	0/0:33,0:33:84.27:0,84,1511	0/0:21,0:21:57.19:0,57,1035	1/1:3,19:22:51.18:1358,51,0	0/0:17,0:17:51.17:0,51,922	0/0:20,0:20:54.17:0,54,942	1/1:1,33:34:84.29:2234,84,0	1/1:3,19:22:57.20:1484,57,0	0/0:21,0:21:63.22:0,63,1147	0/0:43,0:43:99:0,126,2209	0/0:27,0:27:75.26:0,75,1368	0/0:27,0:27:72.25:0,72,1321	0/0:7,0:7:21.07:0,21,392	0/0:21,0:21:60.19:0,60,1052	0/0:14,0:14:42.14:0,42,765	0/0:26,0:26:78.27:0,78,1424	1/1:2,14:16:39.13:1021,39,0	1/1:1,13:15:36.12:953,36,0	1/1:1,12:13:30.10:800,30,0	0/0:10,0:10:30.10:0,30,560	0/0:19,0:19:48.15:0,48,839	0/0:20,0:19:57.13:0,57,938	0/0:8,0:8:24.08:0,24,425
chr10	76695741	.	AG	A	1209.96	PASS	AB=0.950;AC=13;AF=0.232;AN=56;BaseQRankSum=5.529;DP=562;FS=3.479;HRun=2;HaplotypeScore=78.2067;InbreedingCoeff=0.6883;MQ=63.45;MQ0=17;MQRankSum=0.917;QD=8.64;ReadPosRankSum=-3.208;VQSLOD=0.1089;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:19.53:0,20,206	0/0:8,0:8:12.64:0,13,232	0/0:44,0:10:3.22:0,3,112	0/0:37,1:12:10.67:0,11,96	0/0:28,0:27:76.50:0,76,899	0/0:18,0:18:41.40:0,41,363	0/0:10,0:10:24.30:0,24,247	0/0:24,0:24:64.75:0,65,634	0/0:13,0:12:1.71:0,2,49	0/0:25,0:25:72.14:0,72,937	0/0:17,0:17:48.02:0,48,601	0/0:22,0:22:45.15:0,45,274	0/0:7,0:7:1.38:0,1,82	0/0:19,0:19:53.49:0,53,553	0/0:19,0:19:35.12:0,35,605	0/0:16,0:16:45.05:0,45,504	0/0:19,0:19:5.25:0,5,325	1/1:14,0:13:8.16:145,8,0	1/1:17,2:17:24.79:199,25,0	1/1:28,2:29:49.22:428,49,0	1/1:6,0:6:2.87:22,3,0	0/0:11,0:11:13.72:0,14,124	0/0:22,0:22:28.90:0,29,249	0/0:14,0:14:3.47:0,3,13	0/0:14,0:14:30.80:0,31,450	1/1:17,14:31:47.63:383,48,0	1/1:16,0:20:16.98:171,17,0	0/1:18,0:19:16.78:35,0,17
chr10	76695743	.	GA	G	1174.58	PASS	AB=0.899;AC=18;AF=0.321;AN=56;BaseQRankSum=-0.689;DP=557;FS=3.074;HRun=14;HaplotypeScore=77.5674;InbreedingCoeff=0.5110;MQ=63.20;MQ0=18;MQRankSum=2.007;QD=5.34;ReadPosRankSum=2.135;VQSLOD=2.7408;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:15,13:28:1.15:356,0,1	0/1:8,0:8:18.69:19,0,118	0/0:48,0:10:15.20:0,15,99	0/1:40,1:14:5.66:6,0,34	0/0:26,0:26:51.12:0,51,489	0/1:13,2:17:15.49:15,0,172	0/0:8,1:10:3.05:0,3,136	0/1:22,2:25:1.59:2,0,290	1/1:4,8:12:31.77:211,32,0	0/0:25,0:25:69.07:0,69,638	0/0:15,0:16:42.35:0,42,374	1/1:14,7:22:20.15:247,20,0	1/1:5,1:7:10.77:60,11,0	0/0:17,1:19:19.67:0,20,317	0/0:17,0:18:7.52:0,8,292	0/0:16,0:16:9.61:0,10,230	0/0:16,0:16:8.06:0,8,209	0/1:14,0:13:2.56:3,0,131	0/0:21,0:18:15.62:0,16,262	0/0:31,0:30:11.58:0,12,326	0/0:6,0:6:17.34:0,17,135	1/1:7,3:11:10.80:100,11,0	1/1:12,7:21:13.81:215,14,0	1/1:0,12:12:17.86:123,18,0	0/0:12,1:13:1.79:0,2,190	0/0:32,0:32:17.90:0,18,403	0/0:21,0:21:19.97:0,20,294	0/0:17,0:17:43.26:0,43,380
chr10	76695825	.	C	CT	1462.53	PASS	AB=0.852;AC=17;AF=0.304;AN=56;BaseQRankSum=-6.068;DP=483;FS=3.065;HRun=12;HaplotypeScore=56.8046;InbreedingCoeff=0.4887;MQ=68.35;MQ0=1;MQRankSum=-0.442;QD=8.92;ReadPosRankSum=0.179;VQSLOD=2.4675;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,13:21:13.98:284,14,0	0/0:9,0:9:20.87:0,21,153	0/1:19,0:15:11.49:11,0,110	0/0:14,0:10:2.55:0,3,38	0/0:27,1:29:35.42:0,35,410	0/0:24,1:25:27.44:0,27,365	0/0:7,0:8:16.95:0,17,115	0/0:17,0:19:32.98:0,33,231	1/1:3,11:15:26.88:248,27,0	0/1:18,2:20:19.65:20,0,201	0/0:18,1:21:25.50:0,25,325	1/1:3,12:15:2.13:182,2,0	0/1:4,5:9:21.90:126,0,22	0/0:14,0:14:38.75:0,39,283	0/1:12,2:15:20.53:21,0,185	0/0:21,0:20:50.66:0,51,372	0/0:18,0:23:44.22:0,44,274	0/0:16,0:16:34.80:0,35,245	0/1:10,3:14:47.08:47,0,116	0/0:16,1:18:17.59:0,18,281	0/0:11,0:12:22.09:0,22,170	1/1:1,12:13:14.15:299,14,0	1/1:4,13:18:35.76:321,36,0	1/1:2,3:5:9.01:88,9,0	0/0:19,0:18:47.69:0,48,348	0/0:19,1:22:7.73:0,8,201	0/0:25,0:26:64.65:0,65,463	0/0:22,0:22:38.50:0,39,282
chr10	76700698	.	TACAC	T	116.85	PASS	AC=2;AF=0.040;AN=50;BaseQRankSum=1.864;DP=647;FS=0.000;HRun=0;HaplotypeScore=122.7859;InbreedingCoeff=0.4760;MQ=68.18;MQ0=14;MQRankSum=-0.156;QD=4.33;ReadPosRankSum=1.413;VQSLOD=2.2152;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,8:27:15.01:204,15,0	0/0:10,0:9:15.05:0,15,266	./.	./.	0/0:13,0:13:21.07:0,21,406	0/0:27,0:27:17.76:0,18,331	0/0:22,0:23:32.85:0,33,666	0/0:21,0:21:6.49:0,6,93	0/0:21,0:21:23.12:0,23,437	0/0:30,0:29:40.21:0,40,722	0/0:26,0:26:21.07:0,21,374	0/0:22,0:22:15.05:0,15,272	0/0:15,0:15:9.03:0,9,147	0/0:19,0:19:15.05:0,15,252	0/0:23,0:23:14.86:0,15,324	0/0:25,0:25:39.06:0,39,701	0/0:38,0:42:12.78:0,13,858	0/0:12,0:13:19.78:0,20,399	./.	0/0:21,0:21:26.90:0,27,532	0/0:31,0:30:27.09:0,27,515	0/0:20,0:18:5.99:0,6,74	0/0:12,0:18:5.69:0,6,69	0/0:29,0:29:24.08:0,24,499	0/0:12,0:20:6.02:0,6,127	0/0:15,0:15:6.48:0,6,73	0/0:31,1:31:1.51:0,2,657	0/0:8,0:7:12.04:0,12,217
chr10	76701117	.	GA	G	1697.33	PASS	AB=0.857;AC=9;AF=0.161;AN=56;BaseQRankSum=9.280;DP=658;FS=11.527;HRun=10;HaplotypeScore=67.0553;InbreedingCoeff=0.8432;MQ=66.92;MQ0=0;MQRankSum=1.472;QD=16.48;ReadPosRankSum=0.447;VQSLOD=3.2078;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:59,1:59:99:0,118,1483	0/0:4,0:4:12.03:0,12,133	0/0:16,0:14:14.10:0,14,197	0/0:12,0:8:10.87:0,11,102	0/0:17,1:18:22.08:0,22,472	0/0:16,0:18:38.90:0,39,390	0/0:28,1:29:55.16:0,55,837	0/0:41,0:41:78.36:0,78,1057	0/0:25,0:25:66.16:0,66,720	1/1:3,31:34:92.93:796,93,0	1/1:1,14:15:35.98:312,36,0	0/0:21,0:21:51.13:0,51,555	0/0:33,0:33:90.20:0,90,983	0/0:19,0:19:42.08:0,42,446	0/0:24,1:25:43.20:0,43,696	1/1:2,15:17:44.99:391,45,0	0/0:32,0:32:90.24:0,90,995	0/0:19,1:20:28.09:0,28,534	0/0:25,1:26:40.12:0,40,663	0/0:24,0:24:62.96:0,63,674	0/0:18,0:18:42.09:0,42,455	0/0:22,0:22:41.76:0,42,427	0/0:15,1:16:16.04:0,16,389	0/0:38,1:39:76.14:0,76,1042	1/1:3,16:19:38.99:339,39,0	0/1:15,3:18:25.24:25,0,375	0/0:29,0:28:66.16:0,66,721	0/0:8,0:8:24.06:0,24,265
chr10	76701902	.	CA	C	4996.03	PASS	AB=0.974;AC=47;AF=0.839;AN=56;BaseQRankSum=4.752;DP=624;FS=1.207;HRun=1;HaplotypeScore=139.5882;InbreedingCoeff=-0.1724;MQ=83.04;MQ0=0;MQRankSum=-5.131;QD=8.01;ReadPosRankSum=10.194;VQSLOD=1.1905;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:34:71.15:332,71,0	0/1:11,0:11:0.01:62,0,0	0/1:18,4:22:62.20:62,0,140	0/1:22,1:23:99:113,0,221	0/1:22,1:23:9.27:170,0,9	1/1:23,0:23:7.38:151,7,0	1/1:25,0:25:23.80:169,24,0	0/1:29,0:29:52.29:102,0,52	1/1:23,1:24:59.51:289,60,0	0/1:19,0:19:42.93:101,0,43	1/1:20,0:20:47.86:210,48,0	1/1:25,0:25:36.82:237,37,0	1/1:18,1:19:43.99:246,44,0	1/1:22,0:22:43.46:169,43,0	1/1:26,0:26:51.50:253,52,0	1/1:24,0:24:52.14:215,52,0	1/1:23,0:23:47.06:193,47,0	1/1:14,0:14:31.64:132,32,0	0/1:22,0:22:5.29:84,0,5	1/1:27,0:27:45.32:302,45,0	1/1:23,0:23:53.05:199,53,0	1/1:20,0:20:41.67:188,42,0	1/1:24,0:24:38:247,38,0	1/1:29,0:29:39.49:228,39,0	0/1:14,0:14:18.26:69,0,18	0/1:19,0:19:10.63:75,0,11	1/1:28,0:28:67.01:267,67,0	1/1:10,1:11:26.48:131,26,0
chr10	76703738	.	TAA	T	3559.25	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=5.080;DP=509;FS=5.800;HRun=14;HaplotypeScore=105.9472;InbreedingCoeff=0.8252;MQ=53.91;MQ0=0;MQRankSum=1.350;QD=14.95;ReadPosRankSum=3.706;VQSLOD=2.8941;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:19:41.47:0,41,388	0/0:11,1:13:4.81:0,5,342	0/1:12,0:9:10.33:10,0,94	0/0:6,1:3:3.15:0,3,12	0/0:25,0:31:69.40:0,69,772	0/0:20,0:21:36.97:0,37,456	0/0:8,0:10:26.04:0,26,288	0/0:33,0:36:68.08:0,68,802	0/0:5,0:13:20.42:0,20,80	1/1:8,13:21:38.92:361,39,0	1/1:5,23:28:65.99:610,66,0	0/0:4,0:10:7.49:0,7,26	0/0:5,0:11:18.07:0,18,78	0/0:11,0:11:30.06:0,30,364	0/0:21,0:22:48.13:0,48,625	1/1:4,13:18:15.46:332,15,0	0/0:23,0:23:56.67:0,57,749	1/1:4,7:11:16.56:158,17,0	1/1:13,20:32:56.84:526,57,0	1/1:6,18:26:23.91:421,24,0	1/1:1,6:7:8.11:82,8,0	0/0:2,0:15:24.63:0,25,103	0/0:6,1:18:0.66:0,1,59	0/0:1,0:7:12.94:0,13,54	1/1:8,20:31:32.31:320,32,0	1/1:7,5:15:14.27:154,14,0	1/1:7,13:22:23.42:252,23,0	1/1:1,13:14:36.04:333,36,0
chr10	76704628	.	AT	A	7692.06	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=13.742;DP=608;FS=4.171;HRun=2;HaplotypeScore=56.6958;InbreedingCoeff=0.9992;MQ=81.35;MQ0=0;MQRankSum=-3.199;QD=35.61;ReadPosRankSum=1.363;VQSLOD=5.3344;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,2093	0/0:7,0:7:21.06:0,21,296	0/0:18,0:18:54.01:0,54,759	0/0:20,0:20:51.13:0,51,735	0/0:21,0:21:60.20:0,60,897	0/0:21,0:21:63.20:0,63,926	0/0:17,0:17:51.17:0,51,762	0/0:24,0:24:69.23:0,69,1033	0/0:19,0:19:57.16:0,57,813	1/1:0,23:23:69.22:893,69,0	1/1:0,20:20:57.14:721,57,0	0/0:26,0:26:78.25:0,78,1148	0/0:26,0:26:78.24:0,78,1126	0/0:21,0:21:63.20:0,63,920	0/0:33,0:33:99:0,99,1443	1/1:0,13:13:30.10:389,30,0	0/0:28,0:28:84.28:0,84,1258	1/1:0,18:18:48.16:623,48,0	1/1:1,23:24:69.22:882,69,0	1/1:0,21:21:63.14:797,63,0	1/1:0,34:34:84.27:1091,84,0	0/0:15,0:15:45.13:0,45,633	0/0:17,0:17:48.16:0,48,718	0/0:31,0:31:93.27:0,93,1364	1/1:0,10:10:27.09:351,27,0	1/1:1,25:26:75.24:974,75,0	1/1:0,13:13:39.13:506,39,0	1/1:0,14:14:36.12:466,36,0
chr10	76705776	.	T	TA	4716.62	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-8.715;DP=445;FS=13.321;HRun=2;HaplotypeScore=50.9853;InbreedingCoeff=0.9066;MQ=66.11;MQ0=3;MQRankSum=0.656;QD=24.19;ReadPosRankSum=0.739;VQSLOD=3.1793;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.05:0,54,600	0/0:10,0:10:20.09:0,20,241	0/1:16,0:8:6.62:7,0,71	0/0:12,0:7:3.38:0,3,23	0/0:24,0:23:50.92:0,51,510	0/0:17,0:17:36.32:0,36,443	0/0:17,0:17:50.92:0,51,557	0/0:24,0:24:63.08:0,63,662	0/0:12,0:12:29.27:0,29,304	1/1:1,14:15:41.91:460,42,0	1/1:1,18:19:41.82:439,42,0	0/0:10,0:10:24.02:0,24,242	0/0:14,0:14:39.11:0,39,467	0/0:16,0:16:39.09:0,39,444	0/0:26,0:26:64:0,64,695	1/1:0,11:11:18.06:232,18,0	0/0:18,0:17:44.96:0,45,482	1/1:3,16:20:48.93:579,49,0	1/1:4,9:12:17.11:331,17,0	1/1:2,21:22:45.41:515,45,0	1/1:1,10:11:18.13:337,18,0	0/0:6,0:6:12:0,12,131	0/0:16,0:16:41.88:0,42,428	0/0:7,0:7:21.06:0,21,247	1/1:1,18:19:36.12:461,36,0	1/1:9,9:18:30.08:493,30,0	1/1:2,13:15:30.10:387,30,0	1/1:2,12:15:40.65:477,41,0
chr10	76706595	.	T	TG	3082.13	PASS	AB=0.661;AC=14;AF=0.250;AN=56;BaseQRankSum=14.855;DP=680;FS=3.868;HRun=0;HaplotypeScore=104.6587;InbreedingCoeff=0.2189;MQ=55.62;MQ0=10;MQRankSum=-0.201;QD=13.23;ReadPosRankSum=5.511;VQSLOD=4.9027;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,144,2199	0/0:12,0:12:36.09:0,36,482	0/0:18,0:8:21.03:0,21,222	0/0:22,0:11:18.10:0,18,320	0/0:34,0:34:90.96:0,91,1271	0/0:24,0:24:72.21:0,72,957	0/0:38,0:38:99:0,111,1483	0/0:34,0:34:96.74:0,97,1276	0/0:18,0:18:51.15:0,51,682	1/1:9,12:20:24.27:411,24,0	0/1:6,10:16:17.75:211,0,18	0/0:18,0:18:54.14:0,54,692	0/0:22,0:21:60.17:0,60,779	0/0:18,0:18:51.16:0,51,682	0/0:22,0:22:63.16:0,63,843	1/1:7,10:17:2.50:281,3,0	0/0:39,0:39:81.07:0,81,1460	0/1:13,10:21:7.07:261,0,7	0/1:15,10:25:24.18:345,0,24	0/1:9,11:20:13.14:272,0,13	0/1:12,9:18:34.87:182,0,35	0/0:13,0:13:36.11:0,36,488	0/0:20,0:20:60.16:0,60,814	0/0:37,0:37:91.93:0,92,1269	1/1:7,11:17:2.86:279,3,0	0/1:20,16:35:15.82:506,0,16	0/1:13,13:26:7.59:324,0,8	0/1:2,8:10:7.05:170,0,7
chr10	76706596	.	T	TTTG	6047.72	PASS	AB=0.664;AC=15;AF=0.268;AN=56;BaseQRankSum=15.638;DP=682;FS=0.000;HRun=0;HaplotypeScore=124.9080;InbreedingCoeff=0.3473;MQ=55.57;MQ0=10;MQRankSum=-1.071;QD=26.07;ReadPosRankSum=3.718;VQSLOD=4.8527;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:59:99:0,167,2599	0/0:12,0:12:36.11:0,36,570	0/0:18,0:8:9.03:0,9,140	0/0:22,0:11:26.54:0,27,338	0/0:34,0:34:95.89:0,96,1488	0/0:24,0:24:69.22:0,69,1088	0/0:37,0:37:99:0,105,1664	0/0:35,0:35:96.69:0,97,1477	0/0:17,0:17:48.16:0,48,768	1/1:9,11:20:14.36:712,14,0	1/1:6,10:16:21.29:496,21,0	0/0:18,0:18:45.15:0,45,723	0/0:22,0:21:57.18:0,57,894	0/0:19,0:19:48.15:0,48,769	0/0:22,0:22:60.16:0,60,959	1/1:7,10:17:10.31:543,10,0	0/0:40,0:40:99:0,104,1690	0/1:13,10:21:45.28:450,0,45	0/1:15,10:25:86.91:516,0,87	0/1:9,11:20:21.23:537,0,21	0/1:12,9:18:15.26:380,0,15	0/0:13,0:13:36.12:0,36,572	0/0:20,0:20:60.15:0,60,950	0/0:36,0:37:94.19:0,94,1456	1/1:7,11:17:41.38:577,41,0	0/1:19,16:35:95.60:852,0,96	0/1:12,13:25:37.03:638,0,37	0/1:2,8:10:16.20:349,0,16
chr10	76706892	.	AAAAAAAAAAAAAAAC	A	4253.23	PASS	AB=0.966;AC=9;AF=0.161;AN=56;BaseQRankSum=5.875;DP=696;FS=6.687;HRun=0;HaplotypeScore=216.7594;InbreedingCoeff=0.8604;MQ=49.58;MQ0=61;MQRankSum=-2.218;QD=42.96;ReadPosRankSum=4.894;VQSLOD=2.9444;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:64.46:0,64,2950	0/0:8,0:7:18.06:0,18,1047	0/0:94,0:20:27.23:0,27,989	0/0:79,0:17:22.88:0,23,968	0/0:27,0:25:62.16:0,62,2063	0/0:19,0:18:39.12:0,39,1865	0/0:17,0:14:36.11:0,36,1793	0/0:27,0:26:68.04:0,68,3077	0/0:23,0:21:57.18:0,57,1730	1/1:5,12:13:27.48:767,27,0	1/1:2,13:15:29.82:724,30,0	0/0:17,0:15:39.13:0,39,1118	0/0:12,0:11:27.98:0,28,952	0/0:19,0:15:42.14:0,42,2145	0/0:22,0:20:60.21:0,60,3590	1/1:2,23:23:42.62:1677,43,0	0/0:39,0:33:81.70:0,82,4347	0/0:19,0:18:18.06:0,18,465	0/0:17,0:12:36.12:0,36,1046	0/0:27,0:27:66.20:0,66,1461	0/0:9,0:9:27.08:0,27,597	0/0:9,0:8:24.08:0,24,824	0/0:19,0:17:51.18:0,51,1757	0/0:12,0:11:20.50:0,21,669	1/1:5,8:10:30.08:1034,30,0	0/1:27,1:24:49.92:50,0,1844	0/0:29,0:26:81.23:0,81,2143	0/0:18,0:16:36.12:0,36,781
chr10	76706900	.	AAAAAAAC	A	4199.54	PASS	AB=0.980;AC=22;AF=0.393;AN=56;BaseQRankSum=8.654;DP=725;FS=43.872;HRun=0;HaplotypeScore=149.8920;InbreedingCoeff=0.2090;MQ=49.34;MQ0=63;MQRankSum=-3.135;QD=13.68;ReadPosRankSum=3.922;VQSLOD=1.5302;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:37:71.43:0,71,1242	0/0:8,0:7:18.06:0,18,408	0/0:95,0:20:12.71:0,13,350	0/0:82,0:22:31.78:0,32,463	0/0:28,0:26:53.24:0,53,674	0/0:21,0:20:45.07:0,45,824	0/0:16,0:13:30.04:0,30,749	0/0:30,0:29:74.32:0,74,1290	0/1:21,0:19:99:188,0,148	1/1:17,0:13:27.48:387,27,0	1/1:16,0:16:9.57:358,10,0	0/1:17,0:16:99:189,0,126	0/0:11,0:10:7.58:0,8,148	0/0:23,0:19:54.01:0,54,1061	0/0:22,0:20:60.18:0,60,1591	1/1:25,0:23:42.62:788,43,0	0/0:42,0:36:93.57:0,94,1913	0/1:24,0:23:5.78:6,0,39	0/1:14,0:9:50.79:51,0,79	0/1:27,0:27:78.74:303,0,79	1/1:8,0:10:17.72:227,18,0	0/1:11,0:10:8.32:8,0,157	0/1:20,0:18:38.09:38,0,237	0/1:11,1:11:22.76:23,0,68	1/1:18,0:14:41.92:576,42,0	0/1:30,0:26:60.08:362,0,60	0/1:23,4:26:77.41:521,0,77	1/1:16,0:14:0.88:174,1,0
chr10	76706901	.	AAAAAAC	A	4514.59	PASS	AB=0.987;AC=25;AF=0.446;AN=56;BaseQRankSum=9.006;DP=717;FS=41.521;HRun=0;HaplotypeScore=139.0496;InbreedingCoeff=0.3648;MQ=49.52;MQ0=60;MQRankSum=-4.189;QD=14.29;ReadPosRankSum=3.389;VQSLOD=2.7838;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:38:69.75:0,70,1063	0/0:8,0:7:17.99:0,18,346	0/0:94,0:20:12.14:0,12,333	0/0:80,0:22:31.94:0,32,408	0/0:26,0:24:42.06:0,42,493	0/0:21,0:20:45.07:0,45,709	0/0:16,0:13:30.04:0,30,654	0/0:28,0:27:67.71:0,68,1060	0/1:21,0:19:99:179,0,113	1/1:17,0:13:27.47:346,27,0	1/1:16,0:16:9.57:318,10,0	0/1:18,0:16:99:142,0,120	0/1:11,0:10:13.10:13,0,121	0/0:23,0:19:53.79:0,54,923	0/0:23,0:21:63.12:0,63,1402	1/1:25,0:23:42.14:693,42,0	0/0:42,0:36:93.36:0,93,1662	0/1:22,0:22:1.15:27,0,1	0/1:14,0:9:26.08:96,0,26	1/1:24,3:27:1.31:416,1,0	1/1:8,1:10:24.92:240,25,0	0/1:11,0:10:1.92:2,0,127	0/1:19,1:18:99:124,0,212	0/1:12,0:11:16.52:17,0,56	1/1:19,0:15:44.87:540,45,0	1/1:29,1:27:13.13:500,13,0	0/1:24,2:23:23.36:512,0,23	1/1:12,3:13:26.80:351,27,0
chr10	76706902	.	AAAAAC	A	4539.19	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=8.869;DP=723;FS=31.681;HRun=0;HaplotypeScore=131.4695;InbreedingCoeff=0.4943;MQ=50.43;MQ0=60;MQRankSum=-4.569;QD=14.27;ReadPosRankSum=3.451;VQSLOD=2.8228;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:39:70.08:0,70,956	0/0:8,0:7:16.87:0,17,296	0/0:96,0:22:18.10:0,18,369	0/0:80,0:22:30.73:0,31,385	0/0:23,1:22:39.82:0,40,390	0/0:21,0:20:44.96:0,45,582	0/0:17,0:14:33.03:0,33,582	0/0:29,0:28:56.63:0,57,894	0/1:21,0:19:99:127,0,112	1/1:17,0:13:27.46:305,27,0	1/1:16,0:16:9.56:277,10,0	0/1:19,0:17:88.12:88,0,140	0/1:11,0:10:11.63:12,0,114	0/0:23,0:19:50.91:0,51,807	0/0:23,0:21:60.16:0,60,1182	1/1:25,0:23:42.14:597,42,0	0/0:43,0:37:93.22:0,93,1424	1/1:4,18:21:6.77:76,7,0	0/1:14,0:9:13.96:115,0,14	1/1:9,16:26:50.37:526,50,0	1/1:11,0:11:29.22:317,29,0	0/1:11,0:10:7.56:8,0,126	0/1:20,0:18:99:103,0,211	0/1:12,0:11:21.88:22,0,56	1/1:19,0:15:44.87:485,45,0	1/1:29,1:27:36.36:568,36,0	1/1:28,0:25:24.41:539,24,0	1/1:7,6:13:27.08:375,27,0
chr10	76707470	.	CT	C	6898.41	PASS	AB=0.875;AC=37;AF=0.661;AN=56;BaseQRankSum=9.419;DP=595;FS=4.880;HRun=11;HaplotypeScore=112.0918;InbreedingCoeff=0.9233;MQ=67.68;MQ0=0;MQRankSum=-7.380;QD=18.64;ReadPosRankSum=3.099;VQSLOD=4.8284;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,21:29:64.88:559,65,0	0/1:6,1:7:6.53:7,0,131	0/0:21,0:16:28.28:0,28,268	0/0:28,1:19:18.50:0,18,175	0/0:26,0:26:66.13:0,66,678	0/0:17,0:17:45.09:0,45,460	0/0:17,0:18:38.93:0,39,398	0/0:37,1:38:63.79:0,64,853	1/1:7,13:20:44.91:368,45,0	1/1:7,20:27:35.55:492,36,0	1/1:6,27:33:82.93:673,83,0	1/1:2,14:16:38.95:320,39,0	1/1:6,6:12:24.71:189,25,0	0/0:18,0:19:41.93:0,42,421	0/0:21,1:25:38.35:0,38,589	1/1:3,13:16:38.94:320,39,0	0/0:30,0:31:77.82:0,78,796	1/1:4,15:19:38.93:324,39,0	1/1:1,16:17:44.95:378,45,0	1/1:3,17:21:24.92:405,25,0	1/1:1,2:3:8.99:74,9,0	1/1:1,14:15:38.95:320,39,0	1/1:6,14:21:43.96:350,44,0	1/1:2,5:7:17.98:148,18,0	1/1:2,16:19:50.16:401,50,0	1/1:11,33:46:82.95:866,83,0	1/1:11,18:30:39.18:459,39,0	1/1:0,11:11:29.96:246,30,0
chr10	76707504	.	GGTT	G	2204.46	PASS	AB=0.869;AC=8;AF=0.143;AN=56;BaseQRankSum=0.782;DP=644;FS=2.622;HRun=0;HaplotypeScore=159.3265;InbreedingCoeff=0.0925;MQ=56.78;MQ0=15;MQRankSum=-5.751;QD=12.97;ReadPosRankSum=-1.790;VQSLOD=3.2321;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:85.45:0,85,1353	0/0:5,0:5:15.05:0,15,366	0/0:44,0:16:24.75:0,25,331	0/0:46,0:16:24.71:0,25,418	0/0:28,0:28:79.44:0,79,1539	0/0:24,0:23:66.22:0,66,1488	0/0:18,0:18:48.13:0,48,975	0/0:33,0:32:90.16:0,90,1703	0/0:21,0:21:51.09:0,51,809	0/0:27,0:27:9.44:0,9,873	0/1:27,0:26:22.58:23,0,673	0/0:14,0:14:7.36:0,7,491	0/0:13,0:13:37.33:0,37,626	0/0:21,0:19:57.14:0,57,1076	0/0:25,0:25:69.21:0,69,1338	0/0:21,0:21:54.13:0,54,847	0/0:31,0:31:85.84:0,86,1863	0/1:10,1:12:1.65:276,0,2	0/1:23,6:28:45.63:690,0,46	0/1:18,4:22:28.35:350,0,28	1/1:8,0:8:2.01:8,2,0	0/0:16,0:16:46.85:0,47,750	0/0:17,0:17:42.50:0,43,589	0/0:7,0:7:10.26:0,10,199	0/0:25,0:25:10.10:0,10,864	0/1:27,8:33:99:510,0,118	0/1:30,6:36:99:476,0,122	0/0:1,0:1:2.50:0,2,9
chr10	76707505	.	G	GT	4906.99	PASS	AB=0.895;AC=35;AF=0.625;AN=56;BaseQRankSum=10.254;DP=645;FS=8.172;HRun=11;HaplotypeScore=136.9871;InbreedingCoeff=0.4431;MQ=56.69;MQ0=15;MQRankSum=-8.222;QD=9.70;ReadPosRankSum=3.487;VQSLOD=2.8627;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:35:68.03:333,68,0	0/0:5,0:5:14.94:0,15,116	1/1:44,0:16:0.47:40,0,0	0/1:45,0:16:20.83:21,0,49	0/1:24,1:27:0.29:0,0,361	0/0:24,0:23:62.75:0,63,484	0/0:17,0:17:35.63:0,36,278	0/0:32,0:32:59.64:0,60,446	1/1:6,15:21:47.67:456,48,0	1/1:27,0:27:63.98:400,64,0	1/1:27,0:26:65.19:455,65,0	1/1:8,6:14:13.86:304,14,0	0/1:8,5:13:17.11:210,0,17	0/0:20,0:19:37.68:0,38,265	0/1:24,1:25:13.04:13,0,289	1/1:21,0:21:43.75:266,44,0	0/0:31,0:31:76.16:0,76,574	0/1:14,0:13:5.62:62,0,6	0/1:30,0:29:43.06:164,0,43	1/1:23,0:23:42.54:244,43,0	0/0:8,0:8:2.39:0,2,10	1/1:10,7:17:13.40:304,13,0	1/1:7,10:17:27.54:430,28,0	0/1:3,4:7:11.20:79,0,11	1/1:24,0:25:57.70:362,58,0	1/1:35,0:33:70.09:401,70,0	1/1:36,0:36:69.10:354,69,0	1/1:1,0:1:2.22:7,2,0
chr10	76707513	.	T	TG	6526.75	PASS	AB=0.935;AC=27;AF=0.482;AN=56;BaseQRankSum=8.041;DP=655;FS=0.000;HRun=0;HaplotypeScore=121.1459;InbreedingCoeff=0.5117;MQ=51.31;MQ0=17;MQRankSum=-8.632;QD=18.49;ReadPosRankSum=5.859;VQSLOD=6.8696;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:78.63:0,79,480	0/0:6,0:6:18.05:0,18,236	0/0:41,0:11:28.57:0,29,205	0/0:42,1:14:24.81:0,25,262	0/0:26,0:26:64.64:0,65,845	0/0:23,0:22:63.21:0,63,877	0/0:17,0:17:45.10:0,45,574	0/0:31,0:30:81.10:0,81,994	0/1:23,0:23:41.26:41,0,61	1/1:2,22:24:69.22:915,69,0	1/1:1,26:26:69.14:889,69,0	0/1:15,0:15:52.52:53,0,90	0/1:13,0:13:22.22:22,0,131	0/0:21,0:19:57.09:0,57,675	0/0:24,0:24:54.11:0,54,727	1/1:3,21:24:48.13:635,48,0	0/0:36,0:36:99:0,102,1240	1/1:12,2:13:31.05:259,31,0	1/1:24,8:30:50.69:570,51,0	1/1:5,5:24:47.32:481,47,0	0/1:2,0:13:2.85:3,0,5	0/1:19,0:19:17.41:17,0,169	0/1:18,0:18:26.65:47,0,27	0/1:8,0:8:12.62:13,0,54	1/1:1,23:24:60.17:786,60,0	1/1:10,11:30:89.23:943,89,0	1/1:7,10:40:89.39:831,89,0	1/1:0,0:2:2.98:22,3,0
chr10	76708332	.	GGAGTCCACAGAAAT	G	13376.47	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.510;DP=676;FS=1.254;HRun=0;HaplotypeScore=263.9812;InbreedingCoeff=0.9748;MQ=81.63;MQ0=0;MQRankSum=-14.267;QD=67.90;ReadPosRankSum=1.954;VQSLOD=4.5020;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,9122	0/0:16,0:16:48.16:0,48,3294	0/0:23,0:23:69.24:0,69,4109	0/0:34,0:34:96.07:0,96,5118	0/0:26,0:26:75.26:0,75,5062	0/0:20,0:20:60.21:0,60,4022	0/0:20,0:20:57.20:0,57,3708	0/0:30,0:30:84.29:0,84,5286	0/0:18,0:18:54.19:0,54,3500	1/1:12,11:23:33.10:1156,33,0	1/1:6,2:8:6.02:256,6,0	0/0:34,0:34:99:0,102,6866	0/0:32,0:32:93.31:0,93,6098	0/0:38,0:38:99:0,114,7622	0/0:46,0:46:99:0,138,9328	1/1:5,26:31:66.23:2815,66,0	0/0:28,0:28:75.26:0,75,5283	1/1:3,14:17:36.12:1536,36,0	1/1:4,10:14:30.08:1078,30,0	1/1:6,11:17:27.05:1044,27,0	1/1:6,12:18:12.04:512,12,0	0/0:21,0:21:57.20:0,57,3913	0/0:26,0:26:78.25:0,78,5015	0/0:22,0:22:66.23:0,66,4428	1/1:5,19:24:42.14:1792,42,0	1/1:6,17:23:51.16:1907,51,0	1/1:1,13:14:18.53:769,19,0	1/1:2,6:8:12.04:512,12,0
chr10	76709109	.	CTGT	C	2272.14	PASS	AB=0.713;AC=5;AF=0.089;AN=56;BaseQRankSum=10.214;DP=629;FS=11.040;HRun=0;HaplotypeScore=89.3412;InbreedingCoeff=-0.1051;MQ=68.74;MQ0=0;MQRankSum=-9.781;QD=22.95;ReadPosRankSum=-0.779;VQSLOD=2.3636;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,2439	0/0:18,0:18:54.19:0,54,1302	0/1:14,0:14:20.28:20,0,486	0/0:3,0:3:3.01:0,3,74	0/0:35,0:35:99:0,105,2431	0/0:25,0:25:75.24:0,75,1801	0/0:18,0:18:54.19:0,54,1306	0/0:18,0:18:54.19:0,54,1306	0/0:20,0:20:60.21:0,60,1455	0/1:9,23:32:99:1121,0,498	0/1:7,7:14:99:237,0,474	0/0:25,0:25:75.26:0,75,1822	0/0:23,0:23:69.22:0,69,1624	0/0:27,0:27:81.28:0,81,1969	0/0:34,0:34:99:0,102,2417	0/1:9,7:16:99:341,0,525	0/0:23,0:23:69.24:0,69,1608	0/0:14,0:14:42.14:0,42,1035	0/0:28,0:28:84.27:0,84,2015	0/0:17,0:17:51.16:0,51,1203	0/0:22,0:22:66.23:0,66,1627	0/0:21,0:21:63.22:0,63,1528	0/0:21,0:21:63.20:0,63,1503	0/0:23,0:23:69.22:0,69,1651	0/1:9,14:23:99:670,0,495	0/0:38,0:38:99:0,111,2695	0/0:25,0:25:75.26:0,75,1839	0/0:19,0:19:57.20:0,57,1405
chr10	76711163	.	TTC	T	1893.17	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=11.978;DP=534;FS=2.182;HRun=0;HaplotypeScore=76.7776;InbreedingCoeff=0.8271;MQ=68.44;MQ0=0;MQRankSum=-1.596;QD=10.12;ReadPosRankSum=-0.320;VQSLOD=3.3904;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:97.49:0,97,1608	0/0:5,0:5:5.54:0,6,141	0/0:18,0:13:28.68:0,29,366	0/0:11,0:7:11.20:0,11,173	0/0:17,0:17:50.60:0,51,703	0/0:23,0:23:43.99:0,44,799	0/0:22,0:22:62.86:0,63,782	0/0:37,0:36:96.94:0,97,1323	0/0:18,0:18:54.13:0,54,774	0/1:16,0:16:4.04:181,0,4	0/1:13,0:13:2.96:162,0,3	0/0:15,0:15:45.03:0,45,606	0/0:13,0:13:32.36:0,32,482	0/0:21,0:21:54.93:0,55,766	0/0:20,0:20:59.83:0,60,806	1/1:18,2:20:39.84:246,40,0	0/0:38,0:38:99:0,102,1374	1/1:22,1:22:22.57:145,23,0	1/1:31,1:31:44.49:478,44,0	1/1:6,0:6:16.83:81,17,0	1/1:23,2:25:6.23:208,6,0	0/0:12,0:12:35.96:0,36,445	0/0:13,0:13:39.03:0,39,515	0/0:20,0:20:57.14:0,57,817	1/1:14,0:14:23.82:110,24,0	1/1:21,2:23:54.02:337,54,0	1/1:13,1:14:19.74:125,20,0	1/1:1,0:1:3:26,3,0
chr10	76711164	.	TC	T	4790.66	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=7.606;DP=546;FS=5.738;HRun=1;HaplotypeScore=61.5119;InbreedingCoeff=0.9568;MQ=67.87;MQ0=2;MQRankSum=-1.225;QD=25.48;ReadPosRankSum=-0.710;VQSLOD=4.2821;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:95.60:0,96,1241	0/0:5,0:5:11.90:0,12,128	0/0:18,0:13:10.39:0,10,295	0/0:13,0:8:11.17:0,11,153	0/0:17,0:17:47.25:0,47,521	0/0:23,0:23:26.06:0,26,585	0/0:23,0:23:55.97:0,56,609	0/0:37,0:36:99:0,100,1070	0/0:21,0:21:53.95:0,54,595	1/1:1,15:16:34.63:412,35,0	1/1:11,2:13:28.90:295,29,0	0/0:15,0:15:44.33:0,44,452	0/0:13,0:13:31.04:0,31,378	0/0:23,0:23:62.71:0,63,633	0/0:22,0:22:51.62:0,52,609	1/1:2,17:19:42.10:542,42,0	0/0:37,0:37:88:0,88,998	1/1:2,21:22:36.59:493,37,0	1/1:4,28:31:85.35:877,85,0	1/1:2,6:6:18.06:248,18,0	1/1:5,20:25:45.02:550,45,0	0/0:12,0:12:33.91:0,34,348	0/0:13,0:13:39:0,39,409	0/0:21,0:21:57.06:0,57,641	1/1:0,14:14:27.05:339,27,0	1/1:2,21:23:57.12:714,57,0	1/1:1,13:14:24.05:296,24,0	1/1:1,0:1:3:26,3,0
chr10	76711165	.	CT	C	964.93	PASS	AB=0.964;AC=18;AF=0.321;AN=56;BaseQRankSum=11.940;DP=568;FS=5.955;HRun=12;HaplotypeScore=74.5417;InbreedingCoeff=0.5047;MQ=67.23;MQ0=4;MQRankSum=-1.309;QD=4.21;ReadPosRankSum=0.942;VQSLOD=1.2988;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:49:78.07:0,78,919	0/0:4,0:5:5.17:0,5,85	0/0:18,0:13:18.41:0,18,170	0/0:12,2:8:3:0,3,25	0/0:16,2:18:15.84:0,16,342	0/0:23,1:24:23.04:0,23,399	0/0:20,2:23:18.69:0,19,349	0/0:31,2:36:38.70:0,39,565	0/0:24,0:24:45.05:0,45,446	0/1:16,0:16:0.26:57,0,0	0/1:13,0:13:12.74:13,0,59	0/0:14,0:15:32.89:0,33,313	0/0:14,0:14:27.94:0,28,275	0/0:20,0:22:38.01:0,38,381	0/1:18,4:22:15.60:16,0,402	1/1:20,0:20:14.06:153,14,0	0/0:30,5:37:17.20:0,17,681	1/1:23,0:22:6.91:145,7,0	0/1:32,0:31:35.03:129,0,35	1/1:9,0:7:17.11:88,17,0	0/1:25,0:25:23.18:141,0,23	0/1:14,1:15:2.20:2,0,157	0/0:15,0:15:24.03:0,24,231	0/0:22,0:22:48.07:0,48,475	1/1:15,0:15:22.61:119,23,0	1/1:23,0:23:27.61:188,28,0	1/1:16,0:16:18.66:98,19,0	0/0:1,0:1:0:0,0,0
chr10	76711461	.	AAAAT	A	3961.21	PASS	AC=22;AF=0.407;AN=54;BaseQRankSum=9.572;DP=316;FS=9.339;HRun=0;HaplotypeScore=54.4887;InbreedingCoeff=0.8658;MQ=60.82;MQ0=2;MQRankSum=-0.536;QD=30.95;ReadPosRankSum=2.142;VQSLOD=2.6325;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:45.13:0,45,1058	0/0:3,0:3:6.02:0,6,148	0/0:10,0:7:8.99:0,9,144	0/0:10,0:9:7:0,7,120	0/0:10,0:10:21.07:0,21,519	0/0:15,0:15:42.10:0,42,981	0/0:11,0:11:21:0,21,413	0/0:29,0:29:63.21:0,63,1509	0/0:6,0:6:12.04:0,12,296	1/1:3,7:10:15.01:221,15,0	1/1:2,2:4:9.03:151,9,0	0/0:7,0:7:9.03:0,9,198	0/0:3,0:3:5.99:0,6,49	0/0:9,0:9:15.05:0,15,371	0/0:12,0:12:15.04:0,15,297	1/1:3,1:4:3.01:50,3,0	0/0:29,0:29:72.25:0,72,1694	1/1:4,25:29:66.23:1105,66,0	1/1:6,11:17:33.07:498,33,0	1/1:1,6:7:18.02:271,18,0	1/1:3,3:6:9.03:151,9,0	./.	0/0:9,0:9:9.03:0,9,222	0/0:4,0:4:12.04:0,12,287	1/1:4,7:11:15.01:221,15,0	1/1:2,10:12:30.03:442,30,0	1/1:8,15:23:36.12:602,36,0	1/1:0,5:5:15.05:251,15,0
chr10	76711602	.	CAA	C	1395.65	PASS	AB=0.656;AC=21;AF=0.375;AN=56;BaseQRankSum=-0.995;DP=408;FS=4.087;HRun=16;HaplotypeScore=63.3417;InbreedingCoeff=0.7423;MQ=51.78;MQ0=24;MQRankSum=3.594;QD=8.46;ReadPosRankSum=2.663;VQSLOD=0.9937;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:30:23.75:0,24,223	0/0:3,0:3:3.01:0,3,39	0/0:6,0:4:7.77:0,8,30	0/0:4,0:2:5.60:0,6,36	0/0:12,0:11:6.02:0,6,79	0/0:13,0:14:23.37:0,23,237	0/0:14,0:14:35.32:0,35,375	0/0:25,1:25:34.36:0,34,632	0/0:12,0:15:41.07:0,41,361	0/1:10,8:19:31.26:152,0,31	1/1:4,2:6:11.48:74,11,0	0/0:15,0:14:26.93:0,27,276	0/0:8,0:7:8.99:0,9,99	0/0:5,0:5:4.83:0,5,44	0/0:10,0:12:31.64:0,32,279	1/1:10,3:11:5.68:50,6,0	0/0:25,0:23:43.26:0,43,484	1/1:20,15:31:32.05:291,32,0	1/1:3,6:10:11.92:142,12,0	1/1:5,4:8:17.68:137,18,0	1/1:9,12:21:0.61:236,1,0	0/0:6,0:6:15.05:0,15,190	0/0:13,0:14:26.32:0,26,297	0/0:24,0:27:56.31:0,56,618	1/1:3,5:8:11.89:100,12,0	1/1:2,11:12:23.85:201,24,0	1/1:7,4:9:5.92:50,6,0	1/1:3,6:10:20.63:162,21,0
chr10	76712149	.	CTT	C	3070.08	PASS	AB=0.675;AC=24;AF=0.429;AN=56;BaseQRankSum=1.446;DP=554;FS=12.330;HRun=13;HaplotypeScore=100.6296;InbreedingCoeff=0.3090;MQ=80.08;MQ0=4;MQRankSum=-1.065;QD=9.72;ReadPosRankSum=2.782;VQSLOD=1.0812;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,2:20:36.70:37,0,65	0/0:10,0:10:30.10:0,30,432	0/0:40,0:21:30.46:0,30,327	0/1:34,0:22:13.40:13,0,110	0/0:24,0:24:53.71:0,54,710	0/0:18,0:20:53.51:0,54,694	0/0:14,0:16:29.58:0,30,385	0/0:24,0:25:44.62:0,45,574	0/1:6,2:15:44.31:53,0,44	0/1:16,8:25:99:153,0,182	0/1:11,8:21:9.75:10,0,75	0/1:4,2:12:7.13:59,0,7	0/1:3,1:9:9.17:21,0,9	0/0:20,0:22:47.60:0,48,591	0/0:19,1:25:37.67:0,38,699	0/1:8,5:13:87.26:88,0,87	0/0:16,0:20:47.53:0,48,602	1/1:4,21:25:57.08:553,57,0	1/1:5,9:14:27.01:262,27,0	1/1:6,14:22:41.49:372,41,0	1/1:1,7:9:11.94:166,12,0	0/0:3,0:14:28.29:0,28,121	0/0:2,0:21:47.26:0,47,163	0/1:3,1:16:6.26:6,0,46	0/1:11,16:27:70.56:220,0,71	1/1:3,22:26:65.79:622,66,0	1/1:2,17:20:44.79:418,45,0	1/1:1,6:8:23.78:215,24,0
chr10	76714493	.	A	AG	2123.15	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.051;DP=515;FS=5.853;HRun=6;HaplotypeScore=78.6497;InbreedingCoeff=0.9593;MQ=69.00;MQ0=12;MQRankSum=-1.041;QD=25.28;ReadPosRankSum=0.842;VQSLOD=3.7342;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:71.17:0,71,721	0/0:2,0:2:6.01:0,6,61	0/0:53,0:25:43.55:0,44,368	0/0:55,0:22:24.96:0,25,306	0/0:18,0:18:36.06:0,36,360	0/0:9,0:9:18.03:0,18,184	0/0:29,0:29:75.15:0,75,758	0/0:14,0:14:20.41:0,20,193	0/0:15,0:15:38.06:0,38,354	0/0:16,0:16:42.09:0,42,427	0/0:10,0:10:24.04:0,24,241	0/0:16,0:16:37.31:0,37,362	0/0:11,0:11:27.05:0,27,270	0/0:16,0:16:28.19:0,28,322	0/0:27,0:27:68.93:0,69,680	0/0:23,0:22:40.63:0,41,400	0/0:29,0:29:78.14:0,78,785	1/1:4,10:14:29.15:408,29,0	1/1:5,10:15:24.08:301,24,0	1/1:1,3:4:12.04:151,12,0	1/1:4,5:10:13.52:186,14,0	0/0:10,0:10:18.03:0,18,183	0/0:9,0:9:21.05:0,21,213	0/0:21,0:21:59.72:0,60,587	0/0:11,0:11:27.05:0,27,271	1/1:3,18:21:26.56:646,27,0	1/1:5,11:16:39.11:475,39,0	1/1:0,4:4:12.04:150,12,0
chr10	76714568	.	GA	G	5073.36	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=17.075;DP=592;FS=25.468;HRun=3;HaplotypeScore=102.0397;InbreedingCoeff=0.9965;MQ=66.05;MQ0=8;MQRankSum=-3.650;QD=25.24;ReadPosRankSum=3.424;VQSLOD=3.2434;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.29:0,87,1281	0/0:11,0:11:33.09:0,33,453	0/0:42,0:26:57.92:0,58,736	0/0:30,0:21:13.90:0,14,442	0/0:22,0:22:66.19:0,66,914	0/0:16,0:16:48.15:0,48,697	0/0:15,0:15:42.14:0,42,622	0/0:30,0:30:84.28:0,84,1234	0/0:22,0:22:57.66:0,58,853	1/1:4,24:28:71.58:711,72,0	1/1:2,21:23:60.51:584,61,0	0/0:12,0:12:33.10:0,33,468	0/0:15,0:15:42.13:0,42,607	0/0:18,0:18:51.15:0,51,739	0/0:29,0:29:87.28:0,87,1278	1/1:0,19:19:45.09:453,45,0	0/0:30,0:30:84.27:0,84,1233	1/1:1,18:19:47.65:476,48,0	1/1:1,13:14:33.06:329,33,0	1/1:1,12:13:36.55:373,37,0	1/1:3,20:23:25.10:525,25,0	0/0:21,0:21:63.20:0,63,918	0/0:23,0:23:63.21:0,63,936	0/0:26,0:26:62.32:0,62,937	1/1:3,13:16:41.44:375,41,0	1/1:2,15:17:48.09:482,48,0	1/1:2,18:20:50.44:508,50,0	1/1:0,9:9:27.03:258,27,0
chr10	76714713	.	AAAACAAAC	A	4207.89	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.378;DP=520;FS=19.025;HRun=0;HaplotypeScore=150.9058;InbreedingCoeff=0.9372;MQ=62.59;MQ0=4;MQRankSum=-10.191;QD=41.66;ReadPosRankSum=-0.309;VQSLOD=2.1698;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:49.70:0,50,2269	0/0:6,0:6:9.03:0,9,366	0/0:18,0:14:12.02:0,12,319	0/0:20,0:15:12.03:0,12,186	0/0:23,0:23:54.16:0,54,1925	0/0:19,0:19:39.13:0,39,1453	0/0:18,0:18:36.11:0,36,1286	0/0:28,0:28:42.60:0,43,1362	0/0:12,0:12:21.07:0,21,868	0/0:14,0:25:54.19:0,54,1675	0/0:10,0:24:63.22:0,63,1788	0/0:11,0:11:27.09:0,27,1071	0/0:12,0:12:24.06:0,24,840	0/0:16,0:16:39.13:0,39,1557	0/0:25,0:25:60.21:0,60,2409	0/0:7,0:16:33.11:0,33,1066	0/0:42,0:42:84.27:0,84,3134	1/1:10,7:17:24.02:500,24,0	1/1:12,6:18:24:513,24,0	1/1:5,18:22:57.02:1218,57,0	1/1:4,1:5:2.90:16,3,0	0/0:22,0:22:36.12:0,36,1241	0/0:10,0:10:20.96:0,21,727	0/0:23,0:23:48.14:0,48,1702	0/0:3,0:15:48.16:0,48,1644	1/1:11,8:19:39.13:948,39,0	1/1:6,9:15:30.09:708,30,0	1/1:0,4:4:12.04:304,12,0
chr10	76714769	.	TAA	T	4147.48	PASS	AB=0.982;AC=23;AF=0.411;AN=56;BaseQRankSum=7.114;DP=599;FS=8.373;HRun=13;HaplotypeScore=104.6026;InbreedingCoeff=0.9192;MQ=62.58;MQ0=8;MQRankSum=-5.188;QD=15.95;ReadPosRankSum=1.395;VQSLOD=2.3732;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:27:20.69:0,21,147	0/0:7,0:7:15.04:0,15,201	0/0:63,0:20:6.43:0,6,243	0/1:53,0:21:3.73:4,0,115	0/0:17,0:18:41.50:0,42,572	0/0:15,0:17:44.63:0,45,602	0/0:12,0:14:29.58:0,30,385	0/0:31,0:31:63.18:0,63,871	0/0:13,0:14:35.61:0,36,483	1/1:6,20:27:53.87:573,54,0	1/1:5,13:19:44.79:414,45,0	0/0:13,0:15:39.08:0,39,509	0/0:13,0:13:36.06:0,36,465	0/0:13,0:16:38.60:0,39,497	0/0:21,0:23:50.65:0,51,689	1/1:4,10:14:26.96:252,27,0	0/0:35,0:38:88.63:0,89,1191	1/1:3,12:16:38.76:361,39,0	1/1:6,10:18:32.47:285,32,0	1/1:4,13:20:20.83:303,21,0	1/1:1,5:6:8.98:87,9,0	0/0:14,0:16:38.56:0,39,473	0/0:9,0:10:20.54:0,21,251	0/0:15,0:15:38.80:0,39,532	1/1:5,14:19:32.96:370,33,0	1/1:5,25:32:71.29:711,71,0	1/1:3,22:28:71.31:643,71,0	1/1:0,5:5:15.02:145,15,0
chr10	76716090	.	C	CTGTG	2037.42	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=6.238;DP=751;FS=52.029;HRun=0;HaplotypeScore=293.4325;InbreedingCoeff=0.2696;MQ=54.51;MQ0=27;MQRankSum=-7.445;QD=4.19;ReadPosRankSum=2.832;VQSLOD=0.6470;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:26:14.56:166,15,0	0/0:12,0:12:18.06:0,18,290	0/0:34,0:21:2.64:0,3,30	0/1:42,0:29:43.90:44,0,51	0/0:27,0:27:26.68:0,27,395	0/0:17,0:18:33.10:0,33,511	0/0:31,0:31:66.19:0,66,1014	0/0:46,0:43:44.93:0,45,629	1/1:23,2:27:22.65:342,23,0	1/1:20,0:15:13.61:104,14,0	0/1:14,0:13:0:0,0,0	1/1:28,3:31:26.40:379,26,0	1/1:17,0:16:8.45:151,8,0	0/0:29,0:29:38.93:0,39,603	0/0:35,0:35:54.20:0,54,756	0/1:24,0:24:11.73:159,0,12	0/0:32,0:32:60.18:0,60,940	0/1:21,0:20:33.22:33,0,60	0/1:22,0:20:7.30:75,0,7	1/1:15,0:14:10.48:68,10,0	0/1:61,0:56:22.52:56,0,23	0/1:17,0:16:0:0,0,0	1/1:16,1:17:2.65:16,3,0	1/1:27,2:29:7.16:187,7,0	0/1:20,0:20:3.10:33,0,3	0/1:32,0:30:12.27:165,0,12	0/1:25,0:24:23.95:106,0,24	0/1:17,0:17:17.91:136,0,18
chr10	76716101	.	T	TATG	1965.76	PASS	AB=0.952;AC=10;AF=0.179;AN=56;BaseQRankSum=14.172;DP=808;FS=6.349;HRun=0;HaplotypeScore=294.0615;InbreedingCoeff=-0.0127;MQ=42.47;MQ0=49;MQRankSum=-13.145;QD=7.05;ReadPosRankSum=5.607;VQSLOD=1.4624;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:29:39.07:0,39,572	0/0:13,0:12:29.46:0,29,503	0/0:36,0:15:40.01:0,40,661	0/0:47,0:25:72.17:0,72,1161	0/0:27,0:26:40.64:0,41,633	0/0:22,0:22:50.99:0,51,910	0/0:34,0:32:81.26:0,81,1466	0/0:48,0:40:90.66:0,91,1906	0/0:25,0:25:32.57:0,33,371	0/1:30,0:24:60.86:347,0,61	0/0:15,0:14:8.73:0,9,58	0/0:33,0:31:37.95:0,38,470	0/0:16,0:15:13.08:0,13,261	0/0:24,0:24:48.29:0,48,854	0/0:39,0:38:96.27:0,96,1612	1/1:23,1:24:24.59:343,25,0	0/0:32,0:32:64.14:0,64,1521	0/1:25,3:27:66.22:413,0,66	0/1:25,0:19:99:112,0,121	0/1:10,0:9:16.97:59,0,17	0/1:76,10:78:99:117,0,171	0/0:17,0:14:9:0,9,165	0/0:16,0:16:5.94:0,6,110	0/0:29,0:30:10.57:0,11,128	0/0:18,1:18:2.12:0,2,143	0/1:36,0:30:83.49:340,0,83	0/1:22,1:23:76.13:123,0,76	0/1:13,2:14:38.11:260,0,38
chr10	76716102	.	G	GT	3046.17	PASS	AB=0.900;AC=16;AF=0.286;AN=56;BaseQRankSum=12.155;DP=803;FS=11.974;HRun=1;HaplotypeScore=267.1667;InbreedingCoeff=0.4158;MQ=42.29;MQ0=49;MQRankSum=-11.198;QD=9.92;ReadPosRankSum=2.667;VQSLOD=0.2314;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:27:34.72:0,35,382	0/0:14,0:13:27.09:0,27,348	0/0:37,0:15:36.59:0,37,457	0/0:47,0:26:65.92:0,66,786	0/0:26,0:25:30.10:0,30,389	0/0:23,0:23:53.84:0,54,657	0/0:34,0:32:78.25:0,78,1006	0/0:49,0:41:76.11:0,76,1355	0/0:25,0:25:31.68:0,32,310	0/1:27,3:25:43.03:344,0,43	1/1:13,2:14:8.81:120,9,0	0/0:33,0:31:32.10:0,32,352	0/0:14,0:13:15.44:0,15,162	0/0:24,0:24:48.23:0,48,597	0/0:40,0:39:92.70:0,93,1123	1/1:21,3:24:50.81:512,51,0	0/0:32,0:32:67.18:0,67,1064	0/1:27,2:27:35.10:306,0,35	0/1:18,4:16:11.78:339,0,12	1/1:7,2:8:11.50:86,11,0	0/1:70,14:78:84.05:250,0,84	0/0:17,0:14:9.05:0,9,115	0/0:16,0:16:5.85:0,6,76	0/0:29,0:30:12.38:0,12,108	0/1:17,2:18:9.70:44,0,10	0/1:30,2:28:26.65:566,0,27	1/1:16,6:22:38.25:390,38,0	1/1:10,5:14:4.15:269,4,0
chr10	76716103	.	TG	T	2163.99	PASS	AB=0.773;AC=13;AF=0.232;AN=56;BaseQRankSum=10.422;DP=805;FS=3.450;HRun=1;HaplotypeScore=268.9746;InbreedingCoeff=0.1418;MQ=41.37;MQ0=50;MQRankSum=-10.100;QD=7.00;ReadPosRankSum=-1.983;VQSLOD=-0.1024;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:27:35.52:0,36,471	0/0:14,0:13:30.10:0,30,447	0/0:37,0:14:36.96:0,37,484	0/0:47,0:24:68.75:0,69,887	0/0:23,0:22:28.81:0,29,467	0/0:23,0:23:55.55:0,56,795	0/0:34,0:32:81.25:0,81,1209	0/0:52,0:43:99:0,100,1564	0/0:25,0:25:38.50:0,38,466	0/1:24,8:27:91.15:302,0,91	0/1:9,6:14:2.18:108,0,2	0/0:32,0:31:38.97:0,39,542	0/0:14,0:13:20.63:0,21,245	0/0:25,0:25:50.25:0,50,729	0/0:40,0:39:96.17:0,96,1336	1/1:12,11:24:17.83:386,18,0	0/0:33,0:33:90.15:0,90,1320	0/1:27,2:27:99:124,0,176	0/1:14,6:16:16.55:273,0,17	0/1:4,3:8:10.68:30,0,11	0/1:75,8:78:99:164,0,137	0/0:17,0:14:9.34:0,9,125	0/0:16,0:16:5.52:0,6,76	0/0:30,0:30:14.41:0,14,176	0/1:9,5:18:23.50:29,0,24	0/1:20,10:28:57.29:457,0,57	1/1:15,7:21:15.56:281,16,0	0/1:11,2:14:28.92:173,0,29
chr10	76716104	.	G	GTA	710.86	PASS	AB=0.942;AC=14;AF=0.250;AN=56;BaseQRankSum=11.811;DP=823;FS=56.355;HRun=0;HaplotypeScore=296.7808;InbreedingCoeff=-0.0200;MQ=41.06;MQ0=51;MQRankSum=-8.713;QD=2.00;ReadPosRankSum=4.859;VQSLOD=0.5950;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:28:9.93:0,10,174	0/0:14,0:13:29.94:0,30,342	0/0:38,0:14:36.50:0,36,387	0/0:49,0:24:46.93:0,47,552	0/0:23,0:22:30.08:0,30,420	0/0:24,0:24:54.03:0,54,643	0/0:35,0:33:81.14:0,81,1107	0/0:52,0:43:99:0,126,1324	0/1:25,0:25:21.65:22,0,130	0/1:32,0:28:40.49:160,0,40	0/1:15,1:16:2.23:41,0,2	0/0:33,0:31:7.05:0,7,145	0/1:14,0:13:22.51:23,0,58	0/0:25,0:25:51.41:0,51,663	0/0:39,0:38:95.95:0,96,1085	0/1:24,1:25:35.43:102,0,35	0/0:34,0:34:89.98:0,90,1128	0/1:26,1:26:28.54:29,0,184	0/1:21,1:16:19.53:103,0,20	1/1:9,1:11:8.65:32,9,0	0/1:80,9:80:45.27:45,0,118	0/1:18,0:15:1.54:2,0,60	0/0:16,0:16:5.97:0,6,48	0/0:29,0:31:4.04:0,4,52	0/0:19,0:20:2.71:0,3,21	0/1:35,1:31:44.62:188,0,45	0/1:18,3:20:2.29:81,0,2	0/1:8,5:12:0.54:37,0,1
chr10	76716107	.	T	TG	1237.34	PASS	AB=0.914;AC=11;AF=0.196;AN=56;BaseQRankSum=12.433;DP=847;FS=4.527;HRun=1;HaplotypeScore=305.7573;InbreedingCoeff=-0.0230;MQ=39.08;MQ0=53;MQRankSum=-11.429;QD=4.00;ReadPosRankSum=4.937;VQSLOD=0.3173;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:29:37.86:0,38,417	0/0:13,0:12:10.13:0,10,326	0/0:40,0:12:30.98:0,31,375	0/0:53,0:22:52.02:0,52,626	0/0:23,0:22:30.45:0,30,389	0/0:24,0:24:53.86:0,54,672	0/0:34,0:32:78.25:0,78,1006	0/0:53,0:43:99:0,123,1517	0/0:26,0:26:31.68:0,32,311	0/1:36,0:30:95.06:349,0,95	0/0:17,1:17:10.56:0,11,79	0/0:31,0:29:33.57:0,34,320	0/0:16,0:14:15.41:0,15,134	0/0:25,0:25:48.23:0,48,599	0/0:44,0:43:98.73:0,99,1210	0/1:24,2:26:99:124,0,108	0/0:36,0:36:96.27:0,96,1207	0/1:25,3:26:99:129,0,318	0/1:25,1:19:61.70:162,0,62	0/1:11,1:11:6.84:7,0,15	0/1:73,16:82:99:109,0,216	0/0:20,0:17:12.21:0,12,126	0/0:16,0:16:5.85:0,6,76	0/0:31,0:31:12.38:0,12,108	0/1:21,0:20:11.10:11,0,15	0/1:38,1:32:99:292,0,160	1/1:14,5:18:17.92:148,18,0	0/1:7,6:12:53.16:56,0,53
chr10	76716109	.	T	TG	1619.96	PASS	AB=0.971;AC=11;AF=0.196;AN=56;BaseQRankSum=12.342;DP=862;FS=4.015;HRun=1;HaplotypeScore=309.7729;InbreedingCoeff=0.0108;MQ=38.60;MQ0=53;MQRankSum=-12.064;QD=5.13;ReadPosRankSum=5.498;VQSLOD=0.5311;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:31:40.80:0,41,400	0/0:13,0:12:32.90:0,33,382	0/0:45,0:12:30.47:0,30,355	0/0:54,0:20:52:0,52,610	0/0:22,0:21:14.29:0,14,357	0/0:24,0:24:53.85:0,54,670	0/0:33,0:31:78.25:0,78,1006	0/0:57,0:47:99:0,129,1595	0/0:26,0:26:31.68:0,32,310	0/1:35,0:30:99:362,0,193	0/0:16,1:16:7.79:0,8,79	0/0:31,0:29:33.10:0,33,320	0/0:13,0:11:12.24:0,12,82	0/0:26,0:26:48.23:0,48,599	0/0:45,0:44:99:0,102,1227	0/1:26,1:27:60.38:174,0,60	0/0:35,0:35:93.30:0,93,1199	0/1:28,1:27:99:105,0,335	0/1:26,2:21:56.99:248,0,57	0/1:11,0:11:0.33:0,0,2	0/1:87,2:83:81.78:82,0,150	0/0:20,0:17:12.33:0,12,125	0/0:16,0:16:2.83:0,3,25	0/0:32,0:32:9.37:0,9,70	0/1:20,2:21:12.51:13,0,23	0/1:41,1:32:99:475,0,179	1/1:17,3:19:17.53:193,18,0	0/1:13,0:12:57.77:115,0,58
chr10	76716117	.	TG	T	2215.73	PASS	AB=0.913;AC=20;AF=0.357;AN=56;BaseQRankSum=12.544;DP=841;FS=9.638;HRun=2;HaplotypeScore=302.3619;InbreedingCoeff=-0.1024;MQ=36.61;MQ0=52;MQRankSum=-9.913;QD=4.35;ReadPosRankSum=2.939;VQSLOD=-0.4275;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,4:25:30.26:30,0,305	0/0:13,0:12:33.11:0,33,469	0/0:49,0:10:20.11:0,20,186	0/1:53,1:14:14.25:14,0,181	0/0:22,0:21:25.94:0,26,404	0/0:28,0:27:53.21:0,53,735	0/0:35,0:33:84.22:0,84,1161	0/0:55,0:46:99:0,117,1527	0/1:22,0:22:38.57:39,0,56	0/1:24,13:34:99:513,0,150	0/0:15,1:15:5.86:0,6,79	0/1:27,2:27:49.76:79,0,50	0/1:12,0:10:19.01:23,0,19	0/0:25,1:26:48.36:0,48,657	0/0:41,0:40:76.72:0,77,977	0/1:18,7:25:15.41:286,0,15	0/0:37,0:37:99:0,105,1480	0/1:25,4:28:99:148,0,279	0/1:29,3:21:99:176,0,122	0/0:10,0:10:0.40:0,0,1	0/1:80,9:83:88.87:89,0,189	1/1:14,0:12:2.89:10,3,0	0/1:12,0:12:0.02:0,0,0	0/1:29,1:31:6.08:17,0,6	0/1:19,0:18:20.31:28,0,20	0/1:30,10:33:82.13:549,0,82	1/1:15,5:20:14.91:263,15,0	1/1:10,1:10:2.24:113,2,0
chr10	76716118	.	GGTA	G	3095.92	PASS	AB=0.848;AC=19;AF=0.339;AN=56;BaseQRankSum=11.974;DP=839;FS=5.746;HRun=0;HaplotypeScore=316.5184;InbreedingCoeff=-0.1635;MQ=36.22;MQ0=51;MQRankSum=-10.377;QD=6.00;ReadPosRankSum=2.057;VQSLOD=1.2458;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,1:26:67.59:68,0,526	0/0:13,0:12:33.11:0,33,730	0/0:48,0:9:19.77:0,20,211	0/1:57,1:14:19.07:19,0,288	0/0:22,0:21:25.36:0,25,662	0/0:27,0:26:65.71:0,66,1262	0/0:35,0:33:90.14:0,90,1808	0/0:52,0:43:99:0,117,2260	0/1:9,10:19:25.77:228,0,26	0/1:26,9:35:99:475,0,208	0/0:10,3:14:5.86:0,6,105	0/1:20,6:26:17.18:227,0,17	1/1:6,4:9:18.45:165,18,0	0/0:26,0:26:57.32:0,57,1121	0/0:39,0:38:86.36:0,86,1637	0/1:13,9:24:64.90:284,0,65	0/0:37,0:37:99:0,108,2370	0/1:25,2:28:99:197,0,289	0/1:24,6:20:97.62:202,0,98	0/0:7,2:10:8.23:0,8,43	0/1:80,2:84:99:228,0,113	1/1:12,2:11:7.62:37,8,0	0/1:7,5:12:0.04:0,0,0	0/1:26,2:31:10.61:98,0,11	0/1:16,4:20:20.10:53,0,20	0/1:36,7:36:99:592,0,155	0/1:12,7:22:20.66:252,0,21	0/1:5,1:10:33.15:138,0,33
chr10	76716119	.	GTA	G	2032.97	PASS	AB=0.988;AC=23;AF=0.411;AN=56;BaseQRankSum=15.044;DP=835;FS=0.358;HRun=0;HaplotypeScore=313.0911;InbreedingCoeff=0.0743;MQ=36.11;MQ0=53;MQRankSum=-12.052;QD=3.75;ReadPosRankSum=3.134;VQSLOD=2.0682;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:24:26.28:0,26,592	0/0:12,0:11:33.10:0,33,568	0/1:48,1:8:2.59:3,0,94	0/1:56,0:12:10.88:11,0,199	0/0:21,0:20:29.01:0,29,566	0/0:27,0:26:66.17:0,66,1169	0/0:36,0:34:68.82:0,69,1366	0/0:52,0:43:91.26:0,91,1669	0/1:19,0:19:50.87:51,0,57	0/1:37,1:36:99:425,0,143	0/0:14,0:14:5.92:0,6,90	0/1:25,0:24:40.52:41,0,84	0/1:11,0:9:3.04:25,0,3	0/0:26,0:26:57.05:0,57,966	0/0:37,0:36:81.19:0,81,1403	0/1:25,0:25:15:326,0,15	0/0:38,0:38:99:0,111,2033	0/1:29,0:28:99:204,0,250	0/1:31,1:21:99:173,0,138	1/1:10,0:10:8.71:48,9,0	0/1:91,0:84:51.84:191,0,52	1/1:13,0:10:5.01:21,5,0	0/1:12,0:12:0:0,0,0	0/1:31,0:31:17.92:18,0,38	1/1:22,0:21:3.32:43,3,0	0/1:42,2:36:99:316,0,178	1/1:23,0:22:18.63:198,19,0	1/1:11,0:10:17.46:112,17,0
chr10	76716120	.	TATGTGTGTG	T	6532.12	PASS	AB=0.975;AC=22;AF=0.393;AN=56;BaseQRankSum=14.644;DP=835;FS=6.702;HRun=0;HaplotypeScore=356.6638;InbreedingCoeff=0.1200;MQ=36.03;MQ0=53;MQRankSum=-11.430;QD=13.28;ReadPosRankSum=1.863;VQSLOD=2.1546;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:23:32.17:0,32,1122	0/0:13,0:12:36.08:0,36,953	0/0:51,0:7:16.26:0,16,257	0/1:55,0:12:1.50:1,0,367	0/0:21,0:20:29.01:0,29,1259	0/0:27,0:26:65.95:0,66,2181	0/0:35,0:33:84.15:0,84,2578	0/0:50,0:41:91.38:0,91,2768	0/1:19,0:19:9.81:10,0,58	0/1:38,0:36:99:841,0,361	0/0:14,0:13:5.84:0,6,113	0/1:24,0:23:74.89:75,0,113	1/1:11,0:9:5.05:157,5,0	0/0:26,0:26:60.15:0,60,1930	0/0:38,0:37:83.38:0,83,2754	0/1:24,1:25:55.49:923,0,55	0/0:39,0:39:99:0,111,4425	0/1:30,0:29:94.96:789,0,95	0/1:32,0:21:99:454,0,154	1/1:8,2:10:11.45:151,11,0	0/1:89,2:84:4.35:843,0,4	0/1:13,0:10:5.99:27,0,6	1/1:12,0:12:2.69:33,3,0	0/1:30,0:31:11.70:28,0,12	0/1:17,4:21:7.51:111,0,8	0/1:41,4:37:99:987,0,385	1/1:23,0:22:27.25:700,27,0	1/1:8,2:9:19.72:401,20,0
chr10	76716121	.	ATG	A	2178.65	PASS	AB=0.981;AC=21;AF=0.375;AN=56;BaseQRankSum=13.897;DP=841;FS=16.776;HRun=0;HaplotypeScore=314.3017;InbreedingCoeff=0.1145;MQ=36.01;MQ0=53;MQRankSum=-11.990;QD=4.96;ReadPosRankSum=2.526;VQSLOD=1.0571;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:23:35.66:0,36,589	0/0:13,0:12:33.02:0,33,465	0/0:50,0:8:2.95:0,3,147	0/0:56,0:11:16.30:0,16,258	0/0:21,0:20:29.01:0,29,516	0/0:28,0:27:66.19:0,66,1076	0/0:34,0:32:68.49:0,68,1152	0/0:51,0:42:87.28:0,87,1403	0/1:19,0:19:14.43:14,0,27	0/1:39,0:37:99:321,0,150	0/0:14,0:13:5.97:0,6,74	0/1:26,0:24:30.98:37,0,31	1/1:10,0:9:9.82:59,10,0	0/0:26,0:26:57.14:0,57,911	0/0:38,0:37:78.18:0,78,1250	0/1:25,0:25:22.24:346,0,22	0/0:39,0:39:99:0,111,1895	0/1:28,2:29:99:261,0,155	0/1:32,0:22:99:121,0,144	1/1:10,0:10:9.03:100,9,0	0/1:76,15:84:51.43:285,0,51	1/1:13,0:10:9.80:36,10,0	0/1:12,0:12:0:0,0,0	0/1:31,0:31:8.85:9,0,28	1/1:22,0:21:0.18:43,0,0	0/1:45,0:37:99:288,0,280	0/1:23,0:22:33.23:236,0,33	1/1:10,0:9:20.93:195,21,0
chr10	76716123	.	G	GGTA	1273.72	PASS	AB=0.951;AC=17;AF=0.304;AN=56;BaseQRankSum=10.441;DP=838;FS=20.904;HRun=0;HaplotypeScore=332.3596;InbreedingCoeff=-0.1738;MQ=35.44;MQ0=55;MQRankSum=-9.411;QD=2.89;ReadPosRankSum=1.557;VQSLOD=0.9257;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:21:35.87:0,36,617	0/0:13,0:12:36.08:0,36,630	0/0:55,0:8:18.95:0,19,243	0/0:53,0:8:17.24:0,17,279	0/0:22,0:21:32.37:0,32,586	0/0:28,0:27:69.04:0,69,1219	0/0:32,0:30:78.27:0,78,1421	0/0:49,0:40:99:0,101,1760	0/1:18,0:18:9.76:10,0,62	0/1:39,0:37:76.52:77,0,483	0/0:13,1:13:6.02:0,6,111	0/1:22,0:21:35.43:35,0,73	0/1:10,0:9:2.51:3,0,82	0/0:26,0:26:59.79:0,60,1037	0/0:38,0:37:81.12:0,81,1438	0/1:24,1:25:63.52:351,0,64	0/0:38,0:38:99:0,111,2014	0/1:29,1:29:99:103,0,383	0/1:34,1:24:63.86:64,0,256	0/1:9,1:10:5.87:106,0,6	0/1:80,9:85:85.81:86,0,236	1/1:13,0:10:2.97:10,3,0	0/1:12,0:12:0.10:0,0,0	0/1:29,0:29:8.75:9,0,31	0/1:21,0:20:9.25:47,0,9	0/1:45,1:39:99:130,0,551	0/1:22,3:24:99:203,0,156	0/1:5,5:9:5.17:192,0,5
chr10	76716126	.	TGTG	T	2184.42	PASS	AB=0.992;AC=22;AF=0.393;AN=56;BaseQRankSum=12.439;DP=848;FS=32.308;HRun=0;HaplotypeScore=325.1443;InbreedingCoeff=0.2074;MQ=35.42;MQ0=52;MQRankSum=-9.907;QD=4.40;ReadPosRankSum=1.304;VQSLOD=1.4662;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:48.87:0,49,874	0/0:14,0:13:27.56:0,28,578	0/1:63,0:11:4.67:5,0,349	0/0:56,0:7:19.62:0,20,356	0/0:23,0:22:30.96:0,31,650	0/0:28,0:27:66.01:0,66,1392	0/0:31,0:29:78.22:0,78,1445	0/0:49,0:40:95.49:0,95,1872	1/1:18,0:18:14.48:149,14,0	0/1:38,1:37:99:339,0,177	0/0:13,1:13:2.62:0,3,67	0/1:23,0:22:37.98:288,0,38	1/1:11,1:10:20.97:187,21,0	0/0:25,0:25:57.48:0,57,1139	0/0:37,0:36:75.17:0,75,1492	0/1:24,0:25:89:229,0,89	0/0:39,0:39:99:0,117,2541	0/1:28,0:29:99:191,0,257	0/1:34,0:24:62.87:63,0,266	0/0:10,0:10:6:0,6,20	0/1:85,3:87:99:138,0,130	1/1:12,0:9:12.20:93,12,0	1/1:13,0:13:5.80:38,6,0	1/1:30,0:30:9.71:92,10,0	1/1:21,0:20:6.11:73,6,0	0/1:47,1:39:99:312,0,525	0/1:25,0:24:99:118,0,111	0/1:10,0:9:3.31:54,0,3
chr10	76716142	.	A	ATG	830.32	PASS	AB=0.984;AC=12;AF=0.214;AN=56;BaseQRankSum=10.638;DP=893;FS=0.454;HRun=0;HaplotypeScore=354.1492;InbreedingCoeff=0.0798;MQ=36.77;MQ0=35;MQRankSum=-8.898;QD=2.48;ReadPosRankSum=-2.212;VQSLOD=1.0344;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:59.01:0,59,822	0/0:14,0:13:31.08:0,31,406	0/0:71,0:13:31.80:0,32,487	0/0:73,0:13:30.09:0,30,419	0/0:23,0:22:32.65:0,33,448	0/0:30,0:29:63.21:0,63,912	0/0:29,0:27:69.19:0,69,965	0/0:53,0:49:99:0,129,1821	0/0:20,0:20:24.01:0,24,260	0/1:38,0:37:75.13:75,0,363	0/1:16,0:15:0.40:27,0,0	0/0:25,0:25:37.82:0,38,273	0/0:13,0:13:21.63:0,22,208	0/0:30,0:30:57.36:0,57,731	0/0:36,0:35:74.65:0,75,1001	0/1:27,0:27:14.48:184,0,14	0/0:44,0:44:77.63:0,78,1720	0/1:27,2:29:97.53:308,0,98	0/1:31,0:25:4.35:4,0,190	0/0:11,0:11:1.96:0,2,6	0/1:82,6:84:88.44:88,0,94	0/0:13,0:12:11.55:0,12,114	0/0:16,0:16:3.11:0,3,85	0/0:26,0:26:8.08:0,8,55	1/1:24,0:24:1.82:54,2,0	0/1:55,0:48:99:181,0,605	0/1:19,0:18:21.24:21,0,98	1/1:8,0:8:0.69:28,1,0
chr10	76716145	.	GTA	G	2156.74	PASS	AB=0.854;AC=13;AF=0.232;AN=56;BaseQRankSum=10.119;DP=907;FS=1.694;HRun=0;HaplotypeScore=331.0130;InbreedingCoeff=-0.0977;MQ=36.82;MQ0=31;MQRankSum=-9.290;QD=5.77;ReadPosRankSum=-3.333;VQSLOD=2.2385;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:65.37:0,65,1215	0/0:14,1:14:37.36:0,37,555	0/0:76,0:15:34.97:0,35,611	0/0:72,0:13:22.79:0,23,395	0/0:21,0:21:24.10:0,24,643	0/0:30,0:29:48.25:0,48,1204	0/0:30,0:28:69.11:0,69,1145	0/0:50,0:47:99:0,124,2199	0/0:21,0:21:36.12:0,36,644	0/1:30,9:38:99:248,0,282	0/1:12,4:15:26.70:110,0,27	0/0:24,0:24:50.79:0,51,907	0/0:13,0:13:26.96:0,27,456	0/0:29,0:29:41.98:0,42,1008	0/0:36,0:36:84.16:0,84,1445	0/1:20,9:29:40.19:327,0,40	0/0:42,1:43:99:0,103,2075	0/1:29,4:33:99:297,0,146	0/1:34,4:32:99:180,0,130	0/1:9,3:12:10.52:11,0,15	0/1:83,11:88:65.33:330,0,65	0/1:12,0:12:2.17:2,0,194	0/0:17,1:18:20.07:0,20,307	0/0:26,0:26:23.36:0,23,280	0/1:20,4:24:80.47:138,0,80	0/1:42,10:49:99:460,0,160	0/1:16,4:19:60.53:118,0,61	1/1:3,2:5:8.89:89,9,0
chr10	76716147	.	A	ATGTGTGG	8678.57	PASS	AB=0.857;AC=13;AF=0.232;AN=56;BaseQRankSum=8.827;DP=927;FS=21.012;HRun=0;HaplotypeScore=410.6692;InbreedingCoeff=-0.1169;MQ=38.78;MQ0=30;MQRankSum=-10.368;QD=22.54;ReadPosRankSum=-2.146;VQSLOD=2.8582;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:43.90:0,44,1529	0/0:14,0:13:30.99:0,31,678	0/0:75,0:17:40.63:0,41,771	0/0:73,0:15:7.02:0,7,416	0/0:20,0:20:38.96:0,39,849	0/0:32,0:31:66.22:0,66,1582	0/0:30,0:28:60.16:0,60,1323	0/0:50,0:47:99:0,120,2729	0/0:21,0:20:36.11:0,36,734	0/1:37,7:43:99:1856,0,317	0/1:13,5:17:61.17:159,0,61	0/0:26,0:26:50.93:0,51,1077	0/0:10,0:10:27.09:0,27,587	0/0:28,0:28:53.93:0,54,1252	0/0:37,0:37:81.10:0,81,1779	0/1:26,5:31:88.83:1004,0,89	0/0:47,0:47:99:0,108,2604	0/1:28,5:33:99:1301,0,153	0/1:31,5:32:99:774,0,119	0/1:9,3:12:21.38:21,0,54	0/1:92,6:92:99:544,0,122	0/1:12,0:12:29.35:29,0,229	0/0:16,0:17:26.39:0,26,400	0/0:30,0:30:27.47:0,27,347	0/1:18,7:25:99:385,0,127	0/1:43,7:47:99:1571,0,343	0/1:15,6:20:11.98:787,0,12	1/1:4,1:5:9.03:247,9,0
chr10	76716192	.	G	GGT	7913.83	PASS	AB=0.835;AC=20;AF=0.357;AN=56;BaseQRankSum=-1.405;DP=1244;FS=0.617;HRun=0;HaplotypeScore=426.8489;InbreedingCoeff=0.2179;MQ=43.68;MQ0=28;MQRankSum=-4.384;QD=11.01;ReadPosRankSum=-1.616;VQSLOD=3.3253;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:46:53.05:0,53,768	0/0:16,0:16:3.24:0,3,225	0/1:57,0:15:12.88:38,0,13	0/0:43,0:12:3.01:0,3,36	0/0:28,0:28:24.28:0,24,416	0/0:28,0:28:48.86:0,49,593	0/0:35,0:34:43.81:0,44,744	0/0:41,0:36:44.79:0,45,641	0/1:10,10:18:0.27:495,0,0	0/0:78,0:77:97.64:0,98,1451	0/0:35,0:36:63.03:0,63,665	1/1:16,18:33:52.54:949,53,0	1/1:11,7:17:27.08:396,27,0	0/0:31,0:34:13.51:0,14,475	0/1:39,0:38:34.43:34,0,501	0/0:33,0:34:68.78:0,69,720	0/0:42,0:44:93.51:0,94,1261	0/1:33,12:46:99:692,0,403	0/1:39,4:33:99:145,0,295	0/1:30,6:36:99:339,0,318	0/1:142,70:208:99:2069,0,609	1/1:13,11:24:11.29:314,11,0	1/1:16,8:24:13.50:382,13,0	1/1:17,25:42:31.19:691,31,0	0/0:56,0:57:21.22:0,21,685	0/1:65,15:75:99:906,0,763	0/1:17,4:21:99:278,0,148	0/1:7,4:11:69.34:186,0,69
chr10	76716262	.	G	GT	16102.20	PASS	AB=0.857;AC=38;AF=0.679;AN=56;BaseQRankSum=-1.146;DP=1055;DS;FS=2.963;HRun=0;HaplotypeScore=378.6083;InbreedingCoeff=0.5736;MQ=47.45;MQ0=17;MQRankSum=-1.580;QD=20.41;ReadPosRankSum=4.413;VQSLOD=3.3019;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:31:70.04:942,70,0	0/1:7,0:6:1.67:2,0,114	0/0:58,0:13:37.87:0,38,446	0/0:69,0:27:33.99:0,34,627	0/0:30,0:29:27.10:0,27,343	0/1:23,0:25:35.02:35,0,408	0/0:30,0:32:7.48:0,7,694	0/0:39,0:38:99:0,102,1305	1/1:6,9:16:26.03:314,26,0	1/1:21,53:74:41.17:2158,41,0	1/1:4,13:18:18.04:253,18,0	1/1:12,15:29:39.87:414,40,0	0/1:9,9:17:0.70:267,0,1	0/1:29,0:32:26.66:27,0,356	0/0:38,0:38:40.51:0,41,668	1/1:13,19:32:47.38:630,47,0	0/1:20,0:20:27.68:28,0,448	1/1:5,29:35:51.95:1234,52,0	1/1:12,40:52:99:1575,120,0	0/1:13,18:31:6.59:319,0,7	1/1:27,153:177:99:2859,183,0	1/1:4,15:19:36.09:524,36,0	1/1:1,11:12:27:373,27,0	1/1:5,20:25:47.29:680,47,0	1/1:7,18:25:35.67:489,36,0	1/1:30,47:73:99:2329,122,0	1/1:4,14:17:31.91:428,32,0	1/1:0,7:7:15.05:224,15,0
chr10	76716280	.	GT	G	646.92	PASS	AB=0.874;AC=11;AF=0.196;AN=56;BaseQRankSum=9.693;DP=895;DS;FS=91.193;HRun=1;HaplotypeScore=325.4113;InbreedingCoeff=-0.2675;MQ=45.55;MQ0=7;MQRankSum=-9.335;QD=1.93;ReadPosRankSum=2.768;VQSLOD=-0.3967;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:23.73:0,24,470	0/0:9,0:8:9.03:0,9,138	0/0:37,0:7:21.05:0,21,288	0/0:49,0:18:6.36:0,6,347	0/0:27,0:28:16.03:0,16,241	0/1:22,3:25:69.42:69,0,396	0/1:28,5:33:64.88:65,0,488	0/0:36,2:37:22.12:0,22,1355	0/1:9,4:13:97.75:98,0,123	0/0:62,0:63:99:0,129,2071	0/0:15,0:14:3.01:0,3,38	0/1:21,4:26:99:108,0,238	0/1:14,2:16:22.05:22,0,173	0/1:26,5:31:99:114,0,235	0/1:30,5:35:54.60:55,0,442	0/1:22,6:29:99:99,0,278	0/1:14,1:15:13.76:14,0,255	0/0:34,0:34:81.17:0,81,1145	0/1:36,6:38:99:142,0,1010	0/0:15,0:15:17.81:0,18,243	0/0:147,6:146:99:0,131,2179	0/0:18,0:18:30.08:0,30,479	0/0:16,0:16:14.54:0,15,201	0/0:21,1:22:3.90:0,4,450	0/0:18,0:18:22.37:0,22,323	0/1:62,4:64:5.37:5,0,1767	0/0:16,0:15:19.47:0,19,254	0/0:4,0:4:12.04:0,12,182
chr10	76725223	.	AT	A	5707.66	PASS	AB=0.529;AC=39;AF=0.696;AN=56;BaseQRankSum=3.743;DP=466;FS=0.994;HRun=12;HaplotypeScore=56.2495;InbreedingCoeff=0.8441;MQ=59.34;MQ0=1;MQRankSum=1.130;QD=16.59;ReadPosRankSum=0.239;VQSLOD=5.8143;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:62.74:488,63,0	1/1:1,5:6:11.95:93,12,0	0/0:12,0:8:7.79:0,8,98	0/0:9,0:9:6.44:0,6,53	1/1:2,12:14:35.86:279,36,0	1/1:3,13:16:38.81:302,39,0	1/1:2,20:25:62.89:459,63,0	1/1:6,12:19:35.83:279,36,0	0/0:14,1:15:0.75:0,1,177	1/1:3,10:13:26.87:209,27,0	1/1:2,10:15:33:226,33,0	0/0:24,1:25:24.79:0,25,415	0/0:19,1:19:27.86:0,28,454	1/1:2,11:16:5.54:196,6,0	1/1:4,11:15:32.85:255,33,0	1/1:6,19:26:43.86:331,44,0	1/1:4,26:33:71.83:528,72,0	1/1:1,7:8:20.92:162,21,0	1/1:4,12:17:37.88:284,38,0	0/1:1,8:9:3.54:159,0,4	1/1:6,18:24:47.78:371,48,0	0/0:11,0:11:23.98:0,24,231	0/0:8,0:8:18.02:0,18,173	0/0:21,0:21:51.08:0,51,505	1/1:0,10:12:33.96:244,34,0	1/1:3,17:20:44.74:343,45,0	1/1:3,13:17:35.37:262,35,0	1/1:2,10:13:31.92:238,32,0
chr10	76725475	.	AG	A	595.23	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.360;DP=469;FS=0.756;HRun=2;HaplotypeScore=56.6314;InbreedingCoeff=0.9895;MQ=88.10;MQ0=0;MQRankSum=-1.354;QD=21.26;ReadPosRankSum=2.582;VQSLOD=3.7114;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1440	0/0:5,0:5:15.05:0,15,225	0/0:20,0:20:60.16:0,60,874	0/0:15,0:15:45.12:0,45,626	1/1:0,14:14:35.92:346,36,0	0/0:16,0:16:48.16:0,48,718	0/0:16,0:16:42.13:0,42,608	0/0:18,0:18:51.17:0,51,747	0/0:16,0:16:45.14:0,45,654	0/0:16,0:16:48.16:0,48,719	0/0:13,0:13:39.12:0,39,564	0/0:17,0:17:51.16:0,51,742	0/0:17,0:17:51.16:0,51,743	0/0:16,0:16:45.15:0,45,674	0/0:12,0:12:21.40:0,21,460	0/0:10,0:10:30.10:0,30,450	0/0:20,0:20:60.19:0,60,875	0/0:18,0:18:51.13:0,51,736	0/0:17,0:17:51.15:0,51,724	0/0:13,0:13:39.13:0,39,562	0/0:25,0:25:75.24:0,75,1104	0/0:15,0:15:45.15:0,45,662	0/0:20,0:20:60.20:0,60,897	0/0:15,0:15:45.08:0,45,608	1/1:1,13:14:38.94:371,39,0	0/0:22,0:22:66.21:0,66,969	0/0:18,0:19:54.18:0,54,808	0/0:16,0:16:48.16:0,48,719
chr10	76725478	.	T	TCC	1192.51	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.577;DP=480;FS=1.607;HRun=0;HaplotypeScore=65.9531;InbreedingCoeff=0.9913;MQ=87.48;MQ0=0;MQRankSum=-1.006;QD=41.12;ReadPosRankSum=2.698;VQSLOD=5.6837;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1771	0/0:5,0:5:15.05:0,15,245	0/0:20,0:20:60.20:0,60,958	0/0:15,0:15:45.15:0,45,702	1/1:2,14:16:39.13:657,39,0	0/0:17,0:17:51.16:0,51,808	0/0:15,0:15:42.14:0,42,681	0/0:19,0:19:57.17:0,57,853	0/0:16,0:16:42.14:0,42,685	0/0:17,0:17:48.16:0,48,783	0/0:13,0:13:39.13:0,39,633	0/0:16,0:16:48.16:0,48,781	0/0:17,0:17:51.16:0,51,808	0/0:16,0:16:45.15:0,45,734	0/0:12,0:12:33.11:0,33,535	0/0:10,0:10:30.10:0,30,490	0/0:22,0:22:63.20:0,63,1004	0/0:19,0:19:54.15:0,54,849	0/0:17,0:17:51.17:0,51,831	0/0:13,0:13:39.13:0,39,635	0/0:25,0:25:75.26:0,75,1224	0/0:16,0:16:45.15:0,45,734	0/0:21,0:21:63.20:0,63,1002	0/0:14,0:14:42.14:0,42,685	1/1:0,13:13:39.13:657,39,0	0/0:21,0:21:63.22:0,63,1028	0/0:20,0:20:57.15:0,57,890	0/0:16,0:16:48.16:0,48,783
chr10	76727643	.	G	GT	22760.27	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=10.932;DP=753;FS=7.448;HRun=1;HaplotypeScore=111.8795;InbreedingCoeff=0.9989;MQ=77.44;MQ0=0;MQRankSum=-2.801;QD=39.38;ReadPosRankSum=1.016;VQSLOD=4.3669;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:29:78.26:1161,78,0	1/1:1,10:11:30.10:447,30,0	0/0:21,0:21:57.09:0,57,660	0/0:9,0:9:21.07:0,21,266	1/1:2,36:38:93.20:1337,93,0	1/1:1,23:24:51.17:764,51,0	1/1:1,27:28:72.24:1079,72,0	1/1:2,34:36:99:1521,105,0	0/0:17,0:17:51.11:0,51,604	1/1:1,38:39:99:1680,114,0	1/1:4,28:32:72.11:1004,72,0	0/0:31,0:31:90.29:0,90,1167	0/0:26,0:26:75.24:0,75,972	1/1:2,26:28:72.24:1077,72,0	1/1:1,31:32:84.28:1259,84,0	1/1:2,36:38:99:1592,108,0	1/1:0,30:30:84.28:1258,84,0	1/1:0,11:11:24.08:360,24,0	1/1:2,27:29:84.10:1151,84,0	1/1:0,33:33:93.19:1317,93,0	1/1:2,31:33:84.28:1259,84,0	0/0:25,0:25:66.15:0,66,822	0/0:19,0:19:57.16:0,57,712	0/0:27,0:27:77.05:0,77,965	1/1:1,22:23:63.15:917,63,0	1/1:1,31:32:93.32:1394,93,0	1/1:1,37:37:99:1644,111,0	1/1:0,12:12:36.12:539,36,0
chr10	76728595	.	T	TA	642.37	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.635;DP=616;FS=0.771;HRun=9;HaplotypeScore=64.8206;InbreedingCoeff=0.9901;MQ=78.16;MQ0=0;MQRankSum=-0.341;QD=23.79;ReadPosRankSum=0.259;VQSLOD=4.3866;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:27:46.15:737,46,0	0/0:16,0:16:47.99:0,48,417	0/0:17,0:17:26.99:0,27,247	0/0:20,0:20:32.92:0,33,273	0/0:30,0:30:80.97:0,81,703	0/0:30,0:30:80.96:0,81,703	0/0:15,0:15:41.98:0,42,364	0/0:19,0:19:44.97:0,45,391	0/0:24,0:24:53.97:0,54,469	0/0:31,0:31:89.95:0,90,773	0/0:14,0:14:38.98:0,39,335	0/0:17,0:17:47.99:0,48,417	0/0:31,0:31:83.98:0,84,729	0/0:19,0:19:50.95:0,51,436	0/0:18,0:18:50.97:0,51,439	0/0:24,0:24:68.98:0,69,599	0/0:17,0:17:38.96:0,39,339	0/0:18,0:18:44.97:0,45,391	0/0:16,0:16:38.99:0,39,339	0/0:34,0:34:89.96:0,90,778	0/0:23,1:24:35.81:0,36,540	0/0:26,0:26:71.98:0,72,625	0/0:17,0:17:50.99:0,51,443	0/0:32,0:32:80.95:0,81,697	0/0:22,0:22:59.98:0,60,521	0/0:29,0:29:83.97:0,84,727	0/0:23,0:23:62.98:0,63,547	0/0:6,0:6:17.94:0,18,145
chr10	76728721	.	AT	A	697.18	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.725;DP=528;FS=0.000;HRun=1;HaplotypeScore=83.3094;InbreedingCoeff=0.9929;MQ=77.71;MQ0=0;MQRankSum=-0.413;QD=36.69;ReadPosRankSum=0.659;VQSLOD=3.8804;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:57.19:792,57,0	0/0:10,0:10:30.10:0,30,425	0/0:20,0:19:47.64:0,48,620	0/0:25,0:24:26.54:0,27,672	0/0:23,0:23:45.57:0,46,790	0/0:24,0:24:72.09:0,72,959	0/0:14,0:14:35.97:0,36,464	0/0:26,0:26:78.20:0,78,1030	0/0:19,0:19:44.21:0,44,747	0/0:17,0:17:51.12:0,51,683	0/0:19,0:19:57.12:0,57,781	0/0:16,0:16:44.46:0,44,548	0/0:14,0:14:39.11:0,39,536	0/0:15,0:15:30.10:0,30,425	0/0:17,0:17:51.16:0,51,693	0/0:34,0:34:99:0,102,1403	0/0:16,0:16:21.07:0,21,294	0/0:20,0:20:60.15:0,60,814	0/0:14,0:14:42.04:0,42,487	0/0:24,0:24:72.12:0,72,967	0/0:20,0:20:42.11:0,42,578	0/0:19,0:19:57.13:0,57,742	0/0:20,0:20:60.16:0,60,814	0/0:10,0:10:30.10:0,30,423	0/0:19,0:19:54.18:0,54,769	0/0:16,0:16:48.16:0,48,665	0/0:25,0:25:72.24:0,72,1004	0/0:13,0:13:36.12:0,36,510
chr10	76728749	.	AACACACACAC	A	4245.83	PASS	AB=0.921;AC=27;AF=0.519;AN=52;BaseQRankSum=0.600;DP=487;FS=0.856;HRun=0;HaplotypeScore=145.1400;InbreedingCoeff=0.6066;MQ=59.51;MQ0=12;MQRankSum=0.125;QD=17.99;ReadPosRankSum=1.685;VQSLOD=3.8099;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:36.11:0,36,1354	1/1:9,0:9:3.48:52,3,0	./.	0/0:30,0:20:6.02:0,6,119	0/0:24,0:24:27.09:0,27,1051	1/1:17,1:20:9.35:427,9,0	1/1:7,0:12:6.01:77,6,0	0/1:14,0:14:14.93:42,0,15	0/0:17,0:17:24.08:0,24,838	1/1:17,1:17:26.30:429,26,0	1/1:11,2:13:12.04:206,12,0	0/0:16,0:16:36.12:0,36,1262	0/0:15,0:15:30.10:0,30,1175	./.	1/1:15,0:15:24.08:441,24,0	0/1:16,1:20:99:190,0,101	1/1:3,0:14:3.01:49,3,0	1/1:13,0:15:23.49:398,23,0	1/1:16,0:10:2.32:83,2,0	1/1:8,15:24:6.02:139,6,0	0/0:11,7:16:3.01:0,3,126	0/0:14,0:13:22.63:0,23,669	0/0:14,0:14:24.07:0,24,767	0/0:17,0:17:27.09:0,27,974	0/0:18,0:18:27.09:0,27,1055	1/1:8,4:14:30.10:845,30,0	1/1:13,3:19:24.06:565,24,0	0/1:12,1:12:99:303,0,107
chr10	76728787	.	CAGAG	C	510.54	PASS	AB=0.924;AC=21;AF=0.525;AN=40;BaseQRankSum=1.870;DP=500;FS=14.427;HRun=0;HaplotypeScore=145.6522;InbreedingCoeff=0.4509;MQ=42.58;MQ0=23;MQRankSum=-1.156;QD=2.03;ReadPosRankSum=-0.614;VQSLOD=2.0142;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:14.94:0,15,209	0/0:5,0:5:0:0,0,0	./.	./.	0/1:27,0:25:8.18:55,0,8	0/0:21,0:21:0.47:0,0,1	./.	./.	0/0:21,0:20:5.74:0,6,97	1/1:27,0:25:9.01:84,9,0	./.	0/0:21,0:21:6.02:0,6,115	0/0:22,0:22:10.30:0,10,124	./.	1/1:13,0:13:3:28,3,0	1/1:15,0:15:3:28,3,0	1/1:16,0:16:1.10:4,1,0	1/1:26,0:26:2.03:6,2,0	./.	0/1:30,0:30:0:0,0,1	./.	0/0:15,0:14:2.50:0,2,9	0/1:12,5:15:0:1,0,0	1/1:17,0:17:15.02:198,15,0	1/1:17,0:17:8.98:81,9,0	1/1:24,0:22:11.95:119,12,0	1/1:23,0:23:3:28,3,0	0/0:8,0:5:0.47:0,0,1
chr10	76728823	.	GAGAGAGAGAGAGAGAGAT	G	3211.54	PASS	AB=0.996;AC=24;AF=0.444;AN=54;BaseQRankSum=5.623;DP=537;FS=8.161;HRun=0;HaplotypeScore=206.7865;InbreedingCoeff=0.2278;MQ=52.40;MQ0=20;MQRankSum=1.919;QD=10.53;ReadPosRankSum=-0.820;VQSLOD=1.7623;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:45.39:0,45,1634	1/1:6,0:6:5.95:134,6,0	0/0:12,0:8:17:0,17,196	0/0:17,0:9:20.15:0,20,309	0/1:23,0:22:99:208,0,308	0/0:25,0:25:0.94:0,1,2	1/1:19,0:19:14.99:149,15,0	1/1:20,0:19:11.06:369,11,0	0/0:18,0:18:36.04:0,36,1305	1/1:26,0:24:31.80:675,32,0	./.	0/0:20,0:20:39.53:0,40,1525	0/0:27,0:27:51.59:0,52,1876	0/1:18,0:16:0:0,0,0	1/1:14,1:15:3.01:122,3,0	0/1:18,0:18:14.17:189,0,14	0/1:20,0:19:99:165,0,138	0/1:15,0:15:27.86:87,0,28	0/1:8,0:4:5.07:62,0,5	1/1:23,0:23:26.01:203,26,0	0/1:24,0:20:78.47:116,0,78	0/0:26,0:26:53.94:0,54,1008	0/0:24,0:24:29.10:0,29,613	0/0:21,0:20:42.06:0,42,1356	0/1:18,0:18:86.30:86,0,480	0/1:24,1:23:78.68:686,0,79	1/1:22,0:22:1.11:118,1,0	0/1:5,0:4:6.61:17,0,7
chr10	76728825	.	GAGAGAGAGAGAGAGAT	G	4027.22	PASS	AB=0.896;AC=26;AF=0.481;AN=54;BaseQRankSum=5.551;DP=506;FS=3.602;HRun=0;HaplotypeScore=178.1446;InbreedingCoeff=0.3563;MQ=54.03;MQ0=20;MQRankSum=1.401;QD=14.43;ReadPosRankSum=-1.195;VQSLOD=1.9368;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:51.38:0,51,1480	1/1:5,0:5:6.02:173,6,0	0/0:12,0:8:16.98:0,17,164	0/0:17,0:9:20.15:0,20,268	0/1:25,0:24:99:229,0,191	0/0:3,19:22:0.47:0,0,1	1/1:18,0:18:20.99:224,21,0	1/1:23,0:22:53.40:493,53,0	0/0:18,0:18:36.03:0,36,1132	1/1:6,18:22:52.93:788,53,0	./.	0/0:20,0:20:36.51:0,37,1257	0/0:27,0:27:51.59:0,52,1622	0/1:18,0:16:0:0,0,0	1/1:2,12:14:3.01:140,3,0	0/1:3,13:16:14.42:225,0,14	0/1:20,0:19:99:188,0,107	1/1:5,8:13:2.87:117,3,0	1/1:8,0:4:8.94:74,9,0	1/1:12,2:14:29.82:253,30,0	0/1:22,0:18:54.34:116,0,54	0/0:26,0:26:53.94:0,54,899	0/0:22,0:22:29.11:0,29,524	0/0:22,0:21:45.06:0,45,1147	0/1:19,0:19:99:108,0,303	0/1:7,12:17:23:742,0,23	1/1:8,9:17:3:139,3,0	0/1:4,0:3:3.59:18,0,4
chr10	76728827	.	GAGAGAGAGAGAGAT	G	3952.38	PASS	AB=0.922;AC=28;AF=0.538;AN=52;BaseQRankSum=6.405;DP=473;FS=3.471;HRun=0;HaplotypeScore=158.1963;InbreedingCoeff=0.4648;MQ=57.10;MQ0=20;MQRankSum=0.997;QD=16.07;ReadPosRankSum=-0.772;VQSLOD=2.1177;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:51.31:0,51,1342	1/1:4,0:4:9.02:149,9,0	0/0:13,0:8:16.98:0,17,164	0/0:19,0:10:23.05:0,23,240	0/1:26,0:25:99:260,0,115	./.	1/1:13,0:13:23.98:225,24,0	1/1:24,0:23:63.06:577,63,0	0/0:18,0:18:36.03:0,36,979	1/1:19,1:19:53.74:744,54,0	./.	0/0:19,0:19:36.51:0,37,1057	0/0:28,0:28:54.57:0,55,1388	0/1:2,15:15:0:0,0,0	1/1:13,0:13:3.01:122,3,0	0/1:15,0:15:14.43:188,0,14	0/1:15,0:14:79.47:190,0,79	1/1:8,0:8:3.01:97,3,0	1/1:8,0:4:8.97:74,9,0	1/1:14,0:14:32.80:256,33,0	0/1:20,0:16:30.33:138,0,30	0/0:26,0:26:53.94:0,54,795	0/0:25,0:25:41.04:0,41,533	0/0:22,0:21:42.05:0,42,899	0/1:20,0:20:99:118,0,162	1/1:16,0:15:6.25:648,6,0	1/1:10,0:10:3.01:122,3,0	1/1:3,0:2:5.97:45,6,0
chr10	76729238	.	G	GGA	12931.53	PASS	AB=0.718;AC=28;AF=0.500;AN=56;BaseQRankSum=-6.973;DP=807;FS=10.956;HRun=0;HaplotypeScore=112.2191;InbreedingCoeff=0.6135;MQ=68.06;MQ0=13;MQRankSum=0.632;QD=31.31;ReadPosRankSum=-0.716;VQSLOD=6.5129;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:53.97:0,54,601	0/1:5,6:11:15.59:247,0,16	0/0:71,0:30:25.19:0,25,289	0/0:87,0:30:14.90:0,15,101	0/0:32,0:32:63.12:0,63,727	1/1:9,23:32:75.25:1173,75,0	0/1:17,6:23:22.18:617,0,22	1/1:13,17:31:60.18:890,60,0	0/0:20,0:20:39.11:0,39,465	1/1:10,19:29:30.61:1008,31,0	1/1:10,13:23:47.80:717,48,0	0/0:25,0:25:60.16:0,60,708	0/0:14,0:14:27.08:0,27,329	0/1:11,9:20:11.33:632,0,11	1/1:10,11:21:51.17:807,51,0	0/1:15,11:26:10.34:782,0,10	0/1:17,20:37:54.16:1134,0,54	1/1:9,12:21:53.38:789,53,0	0/1:11,3:14:0.57:376,0,1	1/1:12,7:19:33.11:528,33,0	1/1:19,13:32:73.64:1018,74,0	0/0:30,0:32:78.05:0,78,904	0/0:21,0:21:47.51:0,48,537	0/0:47,0:47:99:0,105,1266	0/0:17,0:17:26.77:0,27,283	1/1:21,9:30:18.96:735,19,0	1/1:11,13:24:20.51:784,21,0	1/1:12,6:18:47.95:693,48,0
chr10	76729257	.	C	CAG	925.10	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.699;DP=809;FS=9.118;HRun=0;HaplotypeScore=161.9953;InbreedingCoeff=0.9964;MQ=65.87;MQ0=15;MQRankSum=-0.385;QD=28.03;ReadPosRankSum=0.762;VQSLOD=4.9747;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:33:60.21:1020,60,0	0/0:10,0:10:24.05:0,24,278	0/0:66,0:27:46.27:0,46,552	0/0:100,0:39:29.30:0,29,553	0/0:24,0:24:63.17:0,63,785	0/0:33,0:33:63.91:0,64,1047	0/0:23,0:24:59.24:0,59,721	0/0:36,0:36:72.15:0,72,1005	0/0:18,0:18:48.14:0,48,610	0/0:27,0:27:71.19:0,71,899	0/0:23,0:23:45:0,45,562	0/0:20,0:20:54.18:0,54,702	0/0:11,0:11:30.07:0,30,362	0/0:19,0:19:48.13:0,48,583	0/0:22,0:22:49.67:0,50,601	0/0:28,0:28:66.21:0,66,850	0/0:36,0:36:85.64:0,86,1028	0/0:23,0:22:37.19:0,37,650	0/0:21,0:21:56.45:0,56,648	0/0:17,0:17:45.13:0,45,550	0/0:33,0:33:81.22:0,81,1008	0/0:32,0:32:78.25:0,78,1014	0/0:23,0:23:48.15:0,48,621	0/0:45,0:45:99:0,108,1403	0/0:14,0:14:33.05:0,33,409	0/0:26,0:26:72.21:0,72,903	0/0:25,0:24:56.79:0,57,644	0/0:20,0:20:45.14:0,45,575
chr10	76729310	.	T	TG	10819.84	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-11.283;DP=663;FS=2.669;HRun=6;HaplotypeScore=80.2243;InbreedingCoeff=0.9973;MQ=89.14;MQ0=0;MQRankSum=-2.963;QD=29.32;ReadPosRankSum=2.143;VQSLOD=5.6121;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,117,1183	1/1:1,6:7:15.05:189,15,0	0/0:42,0:42:85.16:0,85,928	0/0:17,0:17:23.87:0,24,248	0/0:25,0:25:66.13:0,66,666	1/1:4,27:31:63.20:792,63,0	1/1:5,15:20:42.13:528,42,0	1/1:3,23:26:60.12:710,60,0	0/0:21,0:21:60.12:0,60,605	1/1:2,19:20:54.17:679,54,0	1/1:2,17:19:45.13:553,45,0	0/0:26,0:26:66.14:0,66,672	0/0:14,0:14:39.09:0,39,398	1/1:1,16:17:51.16:631,51,0	1/1:2,18:20:48.14:591,48,0	1/1:1,23:24:63.20:792,63,0	1/1:4,22:26:69.19:841,69,0	1/1:1,14:15:33.11:413,33,0	1/1:4,19:23:54.13:649,54,0	1/1:1,23:24:63.20:792,63,0	1/1:4,19:23:51.16:641,51,0	0/0:28,0:28:75.15:0,75,758	0/0:26,0:26:69.15:0,69,703	0/0:31,0:31:84.18:0,84,854	0/0:14,0:14:36.08:0,36,367	1/1:3,27:30:72.20:889,72,0	1/1:5,22:27:60.19:752,60,0	1/1:3,13:16:30.10:377,30,0
chr10	76729597	.	TCACACA	T	1393.10	PASS	AB=0.931;AC=25;AF=0.521;AN=48;BaseQRankSum=4.840;DP=598;FS=4.589;HRun=0;HaplotypeScore=129.9850;InbreedingCoeff=0.5078;MQ=53.27;MQ0=12;MQRankSum=-4.347;QD=4.61;ReadPosRankSum=-2.212;VQSLOD=2.0225;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:21.54:0,22,511	0/0:6,0:6:0.47:0,0,1	./.	./.	1/1:13,0:14:0.06:1,0,0	./.	1/1:20,6:25:3.01:60,3,0	1/1:24,0:22:2.97:20,3,0	0/0:17,0:17:21.50:0,21,412	1/1:14,2:16:6:85,6,0	0/0:11,1:15:2.99:0,3,23	0/0:21,0:21:21.07:0,21,576	0/0:21,0:20:33.11:0,33,882	0/1:16,3:19:0.05:55,0,0	1/1:23,7:32:14.64:264,15,0	1/1:13,8:22:18.06:342,18,0	0/0:29,0:30:0.47:0,0,1	1/1:14,3:17:5.04:119,5,0	0/1:12,1:13:32.10:54,0,32	1/1:8,0:8:3:26,3,0	0/1:40,0:40:35.69:42,0,36	0/0:18,0:17:18.02:0,18,320	0/0:13,0:13:12.04:0,12,276	0/0:35,0:34:27.98:0,28,778	1/1:19,0:22:3.01:42,3,0	1/1:23,4:26:8.93:159,9,0	1/1:9,12:22:15.03:282,15,0	./.
chr10	76730096	.	G	GT	16792.37	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-12.224;DP=629;FS=11.854;HRun=2;HaplotypeScore=60.8952;InbreedingCoeff=0.9994;MQ=81.12;MQ0=0;MQRankSum=-3.103;QD=37.82;ReadPosRankSum=2.425;VQSLOD=4.7362;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:75.23:0,75,930	1/1:1,11:12:30.10:432,30,0	0/0:13,0:13:24.03:0,24,280	0/0:21,0:21:51.12:0,51,594	1/1:3,20:23:57.15:797,57,0	1/1:0,20:20:54.18:777,54,0	1/1:0,25:25:69.23:994,69,0	1/1:1,14:15:39.13:560,39,0	0/0:17,0:17:51.14:0,51,618	1/1:2,27:29:81.26:1150,81,0	1/1:0,9:9:27.05:365,27,0	0/0:18,0:17:51.16:0,51,631	0/0:18,0:18:51.14:0,51,618	1/1:1,20:21:54.18:771,54,0	1/1:0,20:20:57.15:797,57,0	1/1:4,22:26:57.19:821,57,0	1/1:1,40:41:99:1555,108,0	1/1:0,23:23:63.21:907,63,0	1/1:1,19:20:57.14:778,57,0	1/1:1,21:22:63.17:883,63,0	1/1:1,40:41:99:1489,105,0	0/0:17,0:17:51.13:0,51,606	0/0:27,0:27:75.19:0,75,889	0/0:25,0:25:75.24:0,75,928	1/1:0,19:19:54.18:777,54,0	1/1:2,31:33:99:1362,99,0	1/1:0,23:23:57.19:821,57,0	1/1:0,22:22:54.15:755,54,0
chr10	76730253	.	C	CAA	2147.09	PASS	AB=0.843;AC=31;AF=0.554;AN=56;BaseQRankSum=-0.331;DP=450;FS=5.160;HRun=16;HaplotypeScore=76.8276;InbreedingCoeff=0.3386;MQ=50.76;MQ0=16;MQRankSum=-4.981;QD=6.67;ReadPosRankSum=-0.895;VQSLOD=0.2156;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,2:21:13.21:180,13,0	0/1:2,1:6:11.63:43,0,12	0/0:4,0:3:5.91:0,6,52	0/0:5,0:4:6.84:0,7,28	0/0:22,0:26:1.51:0,2,111	1/1:9,7:18:14.41:156,14,0	0/1:10,2:11:5.26:95,0,5	1/1:19,4:25:28.95:260,29,0	0/0:17,0:17:19.86:0,20,135	1/1:14,2:16:16.54:159,17,0	1/1:10,3:14:28.77:255,29,0	0/0:19,0:17:19.88:0,20,169	0/0:13,0:14:1.89:0,2,93	0/1:10,0:10:7.55:84,0,8	0/1:8,6:17:1.61:71,0,2	1/1:7,2:19:15.03:159,15,0	0/1:23,1:29:5.15:179,0,5	1/1:9,2:12:17.66:123,18,0	1/1:7,2:13:22.55:169,23,0	1/1:6,6:12:5.97:56,6,0	0/1:9,1:10:12.13:32,0,12	0/1:13,0:15:12.98:13,0,91	0/0:19,0:19:30.67:0,31,218	0/0:19,0:21:35.13:0,35,247	0/1:17,0:19:2.07:2,0,81	1/1:7,7:15:22.84:184,23,0	1/1:5,4:11:8.39:78,8,0	0/1:15,0:14:9.44:31,0,9
chr10	76730435	.	C	CGTGTGT	5563.68	PASS	AB=0.958;AC=35;AF=0.625;AN=56;BaseQRankSum=3.240;DP=793;FS=0.491;HRun=0;HaplotypeScore=187.5307;InbreedingCoeff=0.8214;MQ=50.87;MQ0=17;MQRankSum=-5.678;QD=12.88;ReadPosRankSum=-4.355;VQSLOD=3.2563;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:21.55:0,22,214	1/1:2,2:10:9.03:140,9,0	0/0:57,0:18:9:0,9,104	0/0:62,0:22:3.77:0,4,77	0/0:25,0:25:23.24:0,23,480	1/1:6,0:12:8.70:112,9,0	1/1:8,16:25:11.30:242,11,0	1/1:40,0:41:38.07:497,38,0	0/0:27,0:29:67.45:0,67,1250	1/1:17,5:25:23.19:387,23,0	1/1:8,9:19:6.02:152,6,0	0/0:24,0:30:49.73:0,50,994	0/1:21,0:23:2.34:2,0,762	1/1:9,12:26:12.04:379,12,0	1/1:12,15:30:25.90:714,26,0	1/1:5,17:26:27.09:787,27,0	1/1:11,11:30:17.82:436,18,0	1/1:9,1:21:17.86:326,18,0	1/1:19,4:22:18.05:372,18,0	1/1:6,7:15:2.66:54,3,0	1/1:31,1:56:5.44:52,5,0	0/0:17,0:23:36.11:0,36,605	0/0:15,0:16:24.02:0,24,359	0/0:44,0:50:99:0,102,1919	0/0:20,0:20:22.84:0,23,382	1/1:18,0:26:27.36:435,27,0	1/1:5,5:14:10.28:208,10,0	1/1:5,1:7:12.04:267,12,0
chr10	76732327	.	AG	A	15909.66	PASS	AB=0.889;AC=53;AF=0.946;AN=56;BaseQRankSum=-3.473;DP=776;FS=3.557;HRun=5;HaplotypeScore=179.9729;InbreedingCoeff=0.6587;MQ=84.23;MQ0=0;MQRankSum=-8.740;QD=21.10;ReadPosRankSum=3.598;VQSLOD=2.9289;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:45,13:58:99:1236,146,0	1/1:11,4:15:40.24:310,40,0	0/0:22,0:22:39.99:0,40,278	0/1:28,4:32:15.92:16,0,356	1/1:14,6:20:40.66:338,41,0	1/1:21,9:30:82.85:673,83,0	1/1:28,8:36:93.63:869,94,0	1/1:17,17:34:88.31:709,88,0	1/1:24,8:32:87.40:729,87,0	1/1:12,5:17:47.27:400,47,0	1/1:10,4:14:34.50:292,35,0	1/1:28,5:33:86.12:790,86,0	1/1:23,8:31:74.53:609,75,0	1/1:16,9:25:65.41:501,65,0	1/1:33,7:40:99:1032,108,0	1/1:25,3:28:74.26:686,74,0	1/1:38,2:40:99:957,104,0	1/1:10,5:15:42.47:383,42,0	1/1:11,6:17:31.45:254,31,0	1/1:22,5:27:49.56:542,50,0	1/1:28,9:37:92.26:846,92,0	1/1:22,7:29:62.03:630,62,0	1/1:13,5:18:42.76:335,43,0	1/1:19,5:24:54.61:480,55,0	1/1:23,7:30:73.17:660,73,0	1/1:21,10:31:71.54:711,72,0	1/1:21,7:28:73.92:625,74,0	1/1:12,1:13:32.55:296,33,0
chr10	76732334	.	C	CA	23480.57	PASS	AB=0.961;AC=54;AF=0.964;AN=56;BaseQRankSum=-4.362;DP=773;FS=3.018;HRun=1;HaplotypeScore=159.5273;InbreedingCoeff=0.1020;MQ=85.15;MQ0=0;MQRankSum=-9.898;QD=30.38;ReadPosRankSum=3.541;VQSLOD=4.7243;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:45,15:60:99:2049,168,0	1/1:11,4:15:45:508,45,0	0/1:20,0:20:7.64:8,0,212	0/1:32,3:35:95.27:95,0,252	1/1:11,7:18:39.01:465,39,0	1/1:22,9:31:89.92:1014,90,0	1/1:26,8:34:93.06:1144,93,0	1/1:19,19:38:99:1232,105,0	1/1:22,8:30:87.06:1022,87,0	1/1:10,7:17:51.11:624,51,0	1/1:12,4:16:35.96:387,36,0	1/1:27,7:34:93.21:1179,93,0	1/1:21,8:29:80.09:867,80,0	1/1:14,9:23:65.91:718,66,0	1/1:29,8:37:99:1227,99,0	1/1:25,5:30:87.19:1100,87,0	1/1:35,4:39:99:1464,114,0	1/1:12,4:16:41.86:479,42,0	1/1:5,9:14:42:508,42,0	1/1:22,5:27:72.44:808,72,0	1/1:29,10:39:93.18:1138,93,0	1/1:22,7:29:69.08:817,69,0	1/1:11,5:16:41.93:443,42,0	1/1:21,5:26:66:816,66,0	1/1:22,8:30:81.05:997,81,0	1/1:20,11:31:89.56:1099,90,0	1/1:21,9:30:81.14:956,81,0	1/1:8,1:9:24.08:318,24,0
chr10	76735692	.	T	TC	394.81	PASS	AB=0.950;AC=4;AF=0.071;AN=56;BaseQRankSum=-3.548;DP=654;FS=0.000;HRun=8;HaplotypeScore=66.3197;InbreedingCoeff=0.4875;MQ=74.86;MQ0=0;MQRankSum=-0.370;QD=7.90;ReadPosRankSum=0.290;VQSLOD=0.8854;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:42.12:485,42,0	0/1:8,1:9:7.62:8,0,187	0/1:19,0:18:11.66:12,0,154	0/0:18,0:17:29.87:0,30,249	0/0:25,0:25:66:0,66,595	0/0:23,0:23:63.01:0,63,570	0/0:26,1:27:37.39:0,37,588	0/0:30,0:30:25.48:0,25,394	0/0:23,0:23:66.04:0,66,604	0/0:25,0:25:63.02:0,63,572	0/0:6,0:6:15.01:0,15,137	0/0:30,0:30:77.98:0,78,708	0/0:26,0:27:73.83:0,74,641	0/0:25,0:25:65.97:0,66,592	0/0:33,0:33:89.94:0,90,796	0/0:25,0:25:66.01:0,66,599	0/0:28,0:28:69.02:0,69,631	0/0:24,0:24:66.01:0,66,597	0/0:16,0:16:35.99:0,36,322	0/0:9,0:9:27:0,27,242	0/0:54,2:56:99:0,100,1161	0/0:20,0:20:41.98:0,42,377	0/0:18,0:18:42.01:0,42,381	0/0:31,0:31:74.99:0,75,674	0/0:25,0:25:69:0,69,620	0/0:31,0:31:77.86:0,78,710	0/0:19,0:19:53.96:0,54,477	0/0:10,0:10:26.99:0,27,240
chr10	76736025	.	A	AT	15314.58	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-13.140;DP=664;FS=1.509;HRun=7;HaplotypeScore=58.9572;InbreedingCoeff=0.9951;MQ=81.53;MQ0=0;MQRankSum=-2.998;QD=31.13;ReadPosRankSum=1.331;VQSLOD=4.9775;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,42:46:99:1446,120,0	1/1:1,11:12:30.09:362,30,0	0/0:21,0:21:13.44:0,13,395	0/0:13,0:13:24.90:0,25,226	1/1:1,27:28:75.23:906,75,0	1/1:1,19:20:57.17:689,57,0	1/1:1,31:32:90.28:1087,90,0	1/1:6,27:33:78.23:930,78,0	0/0:20,0:20:54.09:0,54,521	1/1:4,20:24:60.18:724,60,0	1/1:1,15:16:45.14:544,45,0	0/0:26,0:26:78.13:0,78,753	0/0:17,0:17:51.08:0,51,492	1/1:2,23:26:69.08:812,69,0	1/1:4,20:24:28.20:623,28,0	1/1:3,19:22:57.17:689,57,0	1/1:0,21:21:57.17:689,57,0	1/1:3,34:38:99:1173,99,0	1/1:3,23:26:69.18:808,69,0	1/1:5,16:21:42.13:507,42,0	1/1:1,16:17:22.18:551,22,0	0/0:18,0:18:48.07:0,48,463	0/0:25,0:25:69.11:0,69,666	0/0:32,0:32:84.10:0,84,804	1/1:1,28:29:81.25:979,81,0	1/1:1,22:23:63.18:748,63,0	1/1:4,18:22:54.05:648,54,0	1/1:0,12:12:33.10:399,33,0
chr10	76736728	.	C	CGTGGCATGGT	50049.10	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-8.859;DP=785;FS=3.597;HRun=0;HaplotypeScore=204.2739;InbreedingCoeff=0.9931;MQ=79.00;MQ0=0;MQRankSum=-18.615;QD=91.50;ReadPosRankSum=-0.681;VQSLOD=4.4977;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,17:36:63.22:3138,63,0	1/1:5,8:15:36.12:1693,36,0	0/0:29,0:29:62.35:0,62,1681	0/0:30,0:30:75.26:0,75,2254	1/1:8,16:32:42.14:2082,42,0	1/1:6,11:18:45.15:2168,45,0	1/1:15,15:38:66.23:3000,66,0	1/1:19,9:44:99:4682,114,0	0/0:32,0:32:90.27:0,90,2713	1/1:14,13:30:63.09:2670,63,0	1/1:4,8:16:18.06:876,18,0	0/0:32,0:32:90.27:0,90,2740	0/0:37,0:37:85.27:0,85,2967	1/1:10,20:35:84.29:4203,84,0	1/1:6,16:24:60.07:3010,60,0	1/1:7,23:37:90.31:4117,90,0	1/1:9,12:30:42.14:2173,42,0	1/1:5,9:20:33.11:1698,33,0	1/1:9,8:24:59.94:2515,60,0	1/1:3,8:14:24.08:1258,24,0	1/1:14,11:40:33.11:1540,33,0	0/0:19,0:19:51.15:0,51,1588	0/0:17,0:17:48.16:0,48,1435	0/0:42,0:42:99:0,120,3576	1/1:6,16:26:48.16:2320,48,0	1/1:14,12:40:99:4082,102,0	1/1:4,13:23:45.08:2194,45,0	1/1:2,2:5:12.04:630,12,0
chr10	76738002	.	ATCTCTCTCTC	A	288.90	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.926;DP=550;FS=23.006;HRun=0;HaplotypeScore=155.9914;InbreedingCoeff=0.6781;MQ=64.02;MQ0=6;MQRankSum=-5.440;QD=7.81;ReadPosRankSum=-3.035;VQSLOD=0.6663;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:10:12.98:0,13,521	0/0:8,0:7:6.91:0,7,199	0/0:20,0:12:9.03:0,9,202	0/0:30,0:19:10.80:0,11,324	1/1:10,7:18:10.91:125,11,0	0/0:24,0:22:8.09:0,8,172	0/0:25,0:22:15.20:0,15,405	0/0:32,0:31:28.90:0,29,1005	0/0:22,0:23:29.79:0,30,1143	0/0:16,0:16:27.08:0,27,918	0/0:12,0:11:2.28:0,2,70	0/0:11,0:14:22.32:0,22,588	0/0:16,0:16:21.99:0,22,867	0/0:21,0:23:15.04:0,15,478	0/0:31,0:31:18.33:0,18,507	0/0:18,0:18:24.06:0,24,877	0/0:17,0:18:10.59:0,11,260	0/0:17,0:11:21.07:0,21,700	0/0:13,0:13:23.44:0,23,712	0/0:23,0:23:6.02:0,6,184	0/0:21,0:21:9.09:0,9,302	0/0:15,0:16:26.42:0,26,1052	0/0:11,0:11:15.94:0,16,679	0/0:23,0:23:36.12:0,36,1484	1/1:7,12:19:24.03:278,24,0	0/0:28,0:25:54.15:0,54,1797	0/0:23,0:19:27.09:0,27,939	0/0:11,0:11:12.03:0,12,287
chr10	76739317	.	G	GGCT	4480.42	PASS	AB=0.718;AC=34;AF=0.607;AN=56;BaseQRankSum=-6.933;DP=609;FS=6.804;HRun=0;HaplotypeScore=93.5118;InbreedingCoeff=0.5672;MQ=77.38;MQ0=3;MQRankSum=-0.812;QD=11.49;ReadPosRankSum=-3.882;VQSLOD=2.7830;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:33.03:0,33,350	1/1:3,3:7:2.96:60,3,0	0/0:26,0:22:25.44:0,25,255	0/0:23,0:20:18.40:0,18,231	1/1:13,0:13:3:25,3,0	1/1:16,7:23:3.01:61,3,0	0/1:20,22:44:2.81:377,0,3	1/1:24,0:24:31.20:294,31,0	0/0:32,0:32:60.06:0,60,632	1/1:17,0:17:6.43:89,6,0	0/1:10,0:9:0:0,0,0	0/0:23,0:23:42.09:0,42,537	0/0:27,0:27:42.07:0,42,522	1/1:12,15:28:30.07:605,30,0	1/1:7,25:34:23.95:484,24,0	1/1:22,4:26:46.30:572,46,0	0/1:10,22:32:18.44:399,0,18	0/1:11,14:26:15.42:452,0,15	1/1:8,2:9:6.01:86,6,0	1/1:6,0:6:3:25,3,0	1/1:34,12:47:3.01:61,3,0	0/0:8,0:8:6.01:0,6,60	0/0:4,0:4:9:0,9,81	0/0:49,0:49:99:0,117,1328	1/1:5,0:5:5.90:42,6,0	1/1:14,0:14:6.48:68,6,0	1/1:4,16:20:38.49:733,38,0	1/1:3,0:3:5.99:49,6,0
chr10	76739950	.	GCACA	G	5549.07	PASS	AB=0.738;AC=41;AF=0.759;AN=54;BaseQRankSum=-4.192;DP=592;FS=7.304;HRun=0;HaplotypeScore=119.3359;InbreedingCoeff=-0.1183;MQ=67.71;MQ0=9;MQRankSum=-1.002;QD=10.43;ReadPosRankSum=-0.756;VQSLOD=3.7600;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:31:9.01:84,9,0	1/1:2,3:10:18.04:227,18,0	0/0:22,0:14:3.01:0,3,42	./.	1/1:3,0:11:9.01:84,9,0	1/1:9,18:27:29.70:410,30,0	1/1:15,13:29:26.71:420,27,0	0/1:17,3:20:7.20:119,0,7	0/1:9,0:17:25.89:32,0,26	1/1:12,10:22:7.23:414,7,0	1/1:5,7:12:3.74:179,4,0	0/1:7,3:21:70.32:177,0,70	0/1:17,1:20:76.20:121,0,76	1/1:9,9:19:6.71:228,7,0	1/1:10,16:27:25.86:558,26,0	1/1:7,15:26:39:509,39,0	1/1:18,18:38:24.07:331,24,0	0/1:18,1:19:8.97:171,0,9	0/1:7,3:8:1.41:90,0,1	0/1:4,1:13:22.23:22,0,86	1/1:5,14:19:21.03:306,21,0	0/1:11,0:23:2.31:2,0,62	0/1:9,1:14:25.62:37,0,26	0/1:19,3:31:51.29:51,0,201	1/1:4,0:24:36.04:335,36,0	1/1:16,8:24:30.84:422,31,0	0/1:10,3:18:42.64:89,0,43	1/1:0,1:4:12.02:131,12,0
chr10	76740372	.	CG	C	1383.31	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.822;DP=594;FS=0.602;HRun=3;HaplotypeScore=58.9936;InbreedingCoeff=0.9165;MQ=82.55;MQ0=0;MQRankSum=-1.168;QD=28.23;ReadPosRankSum=2.244;VQSLOD=2.9498;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1478	0/0:12,0:12:33.07:0,33,451	0/0:16,0:15:44.88:0,45,554	0/0:21,0:21:62.18:0,62,627	1/1:1,27:28:81.21:985,81,0	0/0:21,0:21:63.15:0,63,846	0/0:36,0:36:99:0,108,1512	0/0:28,0:28:72.22:0,72,997	0/0:20,0:20:60.12:0,60,801	0/0:20,0:20:60.19:0,60,837	0/0:16,0:16:48.13:0,48,649	0/0:27,0:27:81.17:0,81,1100	0/0:28,0:28:84.26:0,84,1166	0/0:22,0:22:66.21:0,66,931	0/0:17,0:17:51.16:0,51,712	0/0:16,0:16:48.12:0,48,666	0/0:23,0:23:69.16:0,69,967	0/0:19,0:19:51.13:0,51,710	0/0:15,0:15:42.13:0,42,583	0/0:20,0:20:60.08:0,60,794	0/0:25,0:25:75.21:0,75,1054	0/0:21,0:21:63.21:0,63,901	0/0:20,0:20:60.12:0,60,814	0/0:25,0:25:72.24:0,72,1033	1/1:3,18:21:42.13:520,42,0	0/0:24,0:24:69.22:0,69,972	0/0:16,0:16:48.05:0,48,662	0/0:1,0:1:3.01:0,3,43
chr10	76740844	.	GAAAC	G	15805.45	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=15.275;DP=796;FS=8.645;HRun=0;HaplotypeScore=137.1102;InbreedingCoeff=0.9958;MQ=72.47;MQ0=9;MQRankSum=0.223;QD=28.27;ReadPosRankSum=1.512;VQSLOD=4.3290;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,45:44:66.23:1108,66,0	1/1:4,11:15:21.07:338,21,0	0/0:25,0:24:33.75:0,34,819	0/0:41,0:35:63.21:0,63,1380	1/1:3,34:37:87.29:1370,87,0	1/1:4,17:21:42.14:705,42,0	1/1:11,22:33:45.13:756,45,0	1/1:12,22:34:65.99:870,66,0	0/0:30,0:30:81.27:0,81,1772	1/1:2,31:32:87.20:1320,87,0	1/1:0,12:12:29.93:490,30,0	0/0:26,0:26:66.21:0,66,1473	0/0:23,0:23:54.18:0,54,1189	1/1:4,19:24:36.12:604,36,0	1/1:2,25:25:54.18:907,54,0	1/1:3,20:23:45.15:756,45,0	1/1:3,31:34:54.18:907,54,0	1/1:8,21:27:36.12:604,36,0	1/1:10,17:26:51.11:782,51,0	1/1:13,20:33:57.19:880,57,0	1/1:10,31:41:49.42:853,49,0	0/0:36,0:36:96.32:0,96,2166	0/0:17,0:17:41.91:0,42,831	0/0:39,0:39:90.30:0,90,2086	1/1:5,16:21:15.05:252,15,0	1/1:3,28:31:84.25:1297,84,0	1/1:1,25:26:38.67:654,39,0	1/1:4,8:12:21.07:352,21,0
chr10	76741376	.	A	ATGTGTGTGTGTGTG	12873.54	PASS	AB=0.903;AC=36;AF=0.643;AN=56;BaseQRankSum=2.882;DP=605;FS=5.716;HRun=0;HaplotypeScore=234.4267;InbreedingCoeff=0.6464;MQ=55.85;MQ0=7;MQRankSum=-9.399;QD=33.01;ReadPosRankSum=-4.970;VQSLOD=2.7595;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:16.18:0,16,1589	1/1:7,0:7:3.01:163,3,0	0/0:31,0:19:7.53:0,8,165	0/0:21,0:15:6.02:0,6,215	1/1:20,0:26:7.08:399,7,0	1/1:24,1:24:30.10:1394,30,0	1/1:17,9:27:3.82:207,4,0	1/1:22,0:22:30.06:800,30,0	0/0:20,0:21:36.10:0,36,1119	1/1:24,0:26:38.34:1452,38,0	1/1:11,7:20:8.11:534,8,0	0/0:24,0:25:54.18:0,54,2100	0/0:22,0:23:45.14:0,45,1402	1/1:11,5:19:8.24:453,8,0	1/1:20,6:27:16.92:872,17,0	0/1:19,5:24:93.83:1094,0,94	0/1:16,0:16:47.53:1049,0,48	1/1:13,0:12:9:345,9,0	1/1:10,1:9:15.05:779,15,0	1/1:17,4:23:8.18:527,8,0	1/1:14,6:22:2.61:127,3,0	0/0:12,0:13:24.08:0,24,802	0/0:19,0:19:33.11:0,33,1172	0/0:33,0:34:60.20:0,60,2201	1/1:19,0:19:1.54:4,2,0	1/1:15,2:21:39.11:1438,39,0	1/1:24,7:32:23.92:1119,24,0	1/1:6,0:5:3.01:119,3,0
chr10	76741408	.	GGTACA	G	195.24	PASS	AB=0.959;AC=11;AF=0.196;AN=56;BaseQRankSum=5.629;DP=516;FS=7.951;HRun=0;HaplotypeScore=130.5929;InbreedingCoeff=-0.2295;MQ=53.04;MQ0=8;MQRankSum=-4.062;QD=1.10;ReadPosRankSum=-1.894;VQSLOD=1.8380;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63:0,63,1921	0/0:5,0:5:12.04:0,12,381	0/0:38,0:16:44.92:0,45,1114	0/0:35,0:21:63.15:0,63,1778	0/1:21,0:20:27.90:28,0,862	0/1:23,0:23:75.85:76,0,1005	0/1:15,0:15:22.26:22,0,704	0/0:26,1:27:72.25:0,72,2210	0/0:17,0:17:51.18:0,51,1641	0/1:17,1:18:12.17:12,0,1400	0/0:13,0:13:21.94:0,22,735	0/0:23,0:23:69.24:0,69,2157	0/0:19,0:19:57.18:0,57,1645	0/1:14,0:14:16.93:17,0,546	0/0:15,0:15:17.71:0,18,496	0/1:22,0:21:74.02:74,0,1123	0/0:12,0:12:27.09:0,27,802	0/1:9,2:10:31.27:31,0,707	0/0:19,0:15:48.13:0,48,1487	0/0:18,0:18:42.06:0,42,1148	0/1:18,0:17:10.97:11,0,1122	0/0:11,0:11:30.10:0,30,968	0/0:17,0:17:48.16:0,48,1547	0/0:29,0:30:78.27:0,78,2553	0/0:16,0:16:39.13:0,39,1236	0/1:15,0:15:2.18:2,0,1236	0/1:15,0:15:9.77:10,0,1119	0/1:2,1:2:54.26:54,0,94
chr10	76744302	.	T	TG	1356.69	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.564;DP=604;FS=16.433;HRun=6;HaplotypeScore=58.8100;InbreedingCoeff=0.9938;MQ=80.98;MQ0=0;MQRankSum=-1.664;QD=31.55;ReadPosRankSum=-0.595;VQSLOD=2.0595;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:71.46:0,71,689	0/0:7,0:7:21.05:0,21,214	0/0:18,0:18:50.07:0,50,467	0/0:17,0:17:18.29:0,18,302	1/1:3,22:25:69.17:837,69,0	0/0:20,0:20:54.11:0,54,546	0/0:27,0:27:75.13:0,75,750	0/0:35,0:35:90.15:0,90,890	0/0:24,0:24:60.13:0,60,612	0/0:20,0:20:51.10:0,51,508	0/0:14,0:14:36.04:0,36,353	0/0:16,0:16:48.11:0,48,487	0/0:17,0:17:48.07:0,48,476	0/0:15,0:15:42.09:0,42,428	0/0:35,0:35:96.18:0,96,960	0/0:26,0:26:66.13:0,66,665	0/0:24,0:24:69.15:0,69,699	0/0:28,0:28:84.14:0,84,840	0/0:22,0:22:60.11:0,60,601	0/0:23,0:23:66.12:0,66,662	0/0:15,0:15:45.08:0,45,451	0/0:22,0:22:63.11:0,63,632	0/0:22,0:22:57.08:0,57,558	0/0:25,0:25:72.03:0,72,694	1/1:0,18:18:51.16:641,51,0	0/0:29,0:29:68.20:0,68,688	0/0:24,0:24:66.13:0,66,665	0/0:11,0:11:33.05:0,33,328
chr10	76746323	.	TC	T	1318.89	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.960;DP=698;FS=10.275;HRun=2;HaplotypeScore=67.0504;InbreedingCoeff=0.9999;MQ=89.34;MQ0=0;MQRankSum=-3.146;QD=33.82;ReadPosRankSum=0.931;VQSLOD=3.3389;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1527	0/0:12,0:12:36.10:0,36,519	0/0:28,0:28:57.14:0,57,1076	0/0:24,0:24:69.12:0,69,979	1/1:0,23:23:63.20:818,63,0	0/0:28,0:28:84.28:0,84,1258	0/0:38,0:38:99:0,114,1688	0/0:22,0:22:60.19:0,60,864	0/0:19,0:19:57.19:0,57,854	0/0:25,0:25:69.23:0,69,1016	0/0:22,0:22:62.87:0,63,925	0/0:15,0:15:45.15:0,45,668	0/0:20,0:20:60.16:0,60,874	0/0:25,0:25:75.25:0,75,1122	0/0:31,0:31:93.30:0,93,1374	0/0:18,0:18:54.18:0,54,809	0/0:33,0:32:99:0,99,1480	0/0:19,0:19:57.16:0,57,812	0/0:25,0:25:72.24:0,72,1065	0/0:23,0:23:69.23:0,69,1034	0/0:49,0:49:99:0,147,2142	0/0:23,0:23:69.22:0,69,1010	0/0:22,0:22:63.20:0,63,913	0/0:37,0:37:99:0,111,1641	1/1:0,16:16:48.16:623,48,0	0/0:30,0:30:90.30:0,90,1331	0/0:25,0:24:75.24:0,75,1101	0/0:12,0:12:36.12:0,36,539
chr10	76747994	.	ATAC	A	190.23	PASS	AB=0.987;AC=11;AF=0.196;AN=56;BaseQRankSum=6.985;DP=602;FS=26.543;HRun=0;HaplotypeScore=210.9106;InbreedingCoeff=0.0164;MQ=45.99;MQ0=6;MQRankSum=-6.981;QD=0.89;ReadPosRankSum=-2.209;VQSLOD=0.9805;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:69.16:0,69,1492	0/1:5,0:5:1.26:1,0,130	0/0:26,0:4:12.04:0,12,215	0/0:19,0:7:16.54:0,17,320	0/1:24,1:25:0.65:1,0,1	0/0:9,0:9:6.28:0,6,148	0/0:17,1:18:17.12:0,17,376	0/0:30,1:23:63.22:0,63,1532	0/0:25,1:25:14.21:0,14,451	0/1:27,0:26:16.04:16,0,1110	0/0:10,0:10:14.58:0,15,302	0/1:42,1:39:4.14:4,0,887	0/1:25,0:25:34.65:35,0,486	0/0:19,1:19:9.82:0,10,432	0/0:12,0:11:22.39:0,22,587	0/1:21,0:21:66.08:66,0,394	0/0:15,0:14:21.07:0,21,503	0/0:8,0:8:17.97:0,18,330	0/0:20,0:17:48.16:0,48,1132	0/0:20,0:19:8.20:0,8,219	0/0:46,1:44:42.78:0,43,1022	0/0:28,1:29:9.43:0,9,456	0/0:21,0:20:14.69:0,15,318	0/0:21,1:22:36.56:0,37,824	1/1:16,0:15:4.83:64,5,0	0/1:31,2:28:59.24:59,0,686	0/1:8,0:7:69.87:70,0,167	0/1:11,0:10:4.31:4,0,375
chr10	76748002	.	CAT	C	255.60	PASS	AB=0.931;AC=12;AF=0.214;AN=56;BaseQRankSum=8.799;DP=715;FS=23.975;HRun=0;HaplotypeScore=252.6852;InbreedingCoeff=-0.0500;MQ=43.32;MQ0=24;MQRankSum=-8.346;QD=0.92;ReadPosRankSum=-4.000;VQSLOD=0.4142;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:36:75.01:0,75,1293	0/0:5,1:6:4.57:0,5,113	0/0:35,0:3:3.01:0,3,31	0/0:26,0:7:8.04:0,8,173	0/1:22,3:25:0.16:0,0,1	0/0:13,1:14:11.83:0,12,179	0/0:20,0:20:9.87:0,10,370	0/0:31,0:23:63.20:0,63,1173	0/1:27,1:27:15.76:16,0,466	0/1:32,2:29:48.86:49,0,904	0/1:17,0:17:3.44:3,0,214	0/0:45,3:44:6.22:0,6,849	0/1:26,2:28:35.19:35,0,503	0/0:23,0:22:18.02:0,18,421	0/0:13,0:12:22.58:0,23,457	0/1:22,3:25:60.48:60,0,451	0/0:21,0:20:38.85:0,39,559	0/0:8,0:8:21.03:0,21,332	0/0:21,0:17:48.16:0,48,899	0/0:29,0:26:8.64:0,9,237	0/0:51,0:46:34.07:0,34,796	0/1:34,1:35:12.17:12,0,348	0/0:25,0:24:20.92:0,21,335	0/0:26,0:26:47.74:0,48,824	1/1:20,2:21:9.53:74,10,0	0/1:41,1:35:56.53:57,0,729	0/1:5,3:7:48.26:48,0,247	0/1:12,0:12:44.45:44,0,287
chr10	76748023	.	GCA	G	5269.74	PASS	AB=0.747;AC=26;AF=0.464;AN=56;BaseQRankSum=0.566;DP=865;FS=13.411;HRun=0;HaplotypeScore=316.3690;InbreedingCoeff=0.1453;MQ=38.38;MQ0=47;MQRankSum=-0.153;QD=10.75;ReadPosRankSum=0.388;VQSLOD=3.4449;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,1:35:27.66:0,28,915	1/1:6,5:10:11.49:139,11,0	0/0:54,0:1:3.01:0,3,48	0/0:45,0:4:3.01:0,3,38	0/0:28,0:32:0.43:0,0,2	0/1:8,9:17:17.63:193,0,18	1/1:13,12:25:0.09:415,0,0	1/1:18,2:18:3.72:78,4,0	0/0:30,0:30:37.93:0,38,521	0/1:30,13:39:99:397,0,207	1/1:16,4:19:13.22:144,13,0	0/1:49,2:51:9.57:10,0,895	0/0:32,1:30:13.12:0,13,486	1/1:16,13:27:23.56:412,24,0	1/1:9,13:21:34.71:407,35,0	0/1:16,15:31:10.42:411,0,10	1/1:2,22:24:36.66:705,37,0	0/1:6,4:11:19.27:143,0,19	0/1:10,2:10:19.37:37,0,19	0/1:29,7:35:17.79:118,0,18	1/1:24,28:50:34.91:607,35,0	0/0:41,0:41:25:0,25,430	0/0:28,0:27:18.98:0,19,328	0/0:37,1:38:45.55:0,46,1176	0/0:33,0:35:5.64:0,6,45	0/1:30,19:43:20.69:653,0,21	0/1:6,6:12:44.48:183,0,44	0/1:8,7:14:16.80:220,0,17
chr10	76748031	.	A	AC	1336.08	PASS	AB=0.935;AC=18;AF=0.321;AN=56;BaseQRankSum=11.323;DP=979;FS=88.479;HRun=1;HaplotypeScore=361.2309;InbreedingCoeff=-0.4692;MQ=36.66;MQ0=53;MQRankSum=-9.169;QD=2.39;ReadPosRankSum=-0.933;VQSLOD=-0.4343;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,1:38:53.73:0,54,817	0/1:11,1:11:8.01:8,0,80	0/0:71,0:3:9.02:0,9,106	0/0:56,0:4:11.97:0,12,128	0/0:33,3:38:10.83:0,11,104	0/1:16,1:17:60.61:61,0,111	0/1:28,6:34:35.04:35,0,287	0/1:25,0:21:3.23:3,0,415	0/1:32,0:32:22.32:22,0,513	0/1:48,8:50:99:243,0,705	0/1:21,0:21:6.57:7,0,84	0/1:53,5:55:11.44:11,0,808	0/1:29,4:30:99:242,0,456	0/0:30,1:29:30.47:0,30,232	0/0:22,2:23:2.12:0,2,225	0/1:32,3:34:99:124,0,206	0/0:27,0:27:36.05:0,36,313	0/1:12,0:12:61.61:63,0,62	0/1:9,1:8:48.96:49,0,131	0/1:42,0:40:99:145,0,127	0/0:64,0:59:66.61:0,67,469	0/1:45,1:45:99:114,0,457	0/0:28,0:27:28.96:0,29,373	0/0:40,1:41:83.96:0,84,1061	0/1:40,4:44:99:133,0,108	0/1:53,1:46:70.67:71,0,558	0/1:9,4:13:99:144,0,124	0/1:13,0:12:14.40:14,0,172
chr10	76748083	.	GCACACA	G	6082.58	PASS	AB=0.777;AC=29;AF=0.518;AN=56;BaseQRankSum=7.439;DP=870;FS=89.354;HRun=0;HaplotypeScore=297.5340;InbreedingCoeff=0.5658;MQ=41.19;MQ0=58;MQRankSum=-5.120;QD=14.66;ReadPosRankSum=-3.721;VQSLOD=0.6323;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,1:43:7.97:0,8,170	1/1:6,6:12:6.02:102,6,0	0/0:67,0:7:11.53:0,12,188	0/0:65,0:6:12.01:0,12,182	0/0:26,0:27:24.13:0,24,559	1/1:9,5:14:11.93:231,12,0	1/1:19,6:27:35.20:511,35,0	0/1:28,18:38:99:884,0,551	0/0:33,0:34:76.14:0,76,2227	0/1:24,13:37:99:780,0,176	1/1:6,5:11:5.49:57,5,0	0/0:38,0:37:72.22:0,72,1911	0/0:22,0:22:27.09:0,27,816	1/1:15,10:24:30.81:360,31,0	1/1:4,18:21:47.98:574,48,0	0/1:20,6:26:68.89:346,0,69	1/1:14,14:29:27.06:460,27,0	1/1:10,0:10:15.02:257,15,0	0/1:12,1:6:7.90:161,0,8	1/1:21,4:27:16.08:171,16,0	1/1:27,38:62:5.01:43,5,0	0/0:37,0:38:24.02:0,24,581	0/0:18,0:17:20.92:0,21,323	0/0:54,0:56:99:0,114,3208	0/0:42,0:40:47.50:0,48,1191	1/1:22,10:31:40:849,40,0	0/1:6,3:9:58.47:164,0,58	1/1:5,2:7:7.27:132,7,0
chr10	76748100	.	CA	C	386.67	PASS	AB=0.955;AC=15;AF=0.268;AN=56;BaseQRankSum=9.917;DP=942;FS=83.886;HRun=1;HaplotypeScore=258.0167;InbreedingCoeff=-0.2076;MQ=39.10;MQ0=62;MQRankSum=-7.116;QD=1.11;ReadPosRankSum=2.157;VQSLOD=-0.5980;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:40:30.42:0,30,294	0/0:12,1:14:15.01:0,15,206	0/0:65,1:7:1.33:0,1,168	0/0:66,0:7:21.06:0,21,279	0/0:36,0:36:27.21:0,27,376	0/1:14,0:14:6.45:6,0,13	0/1:29,2:29:99:137,0,247	0/1:53,1:45:29.07:29,0,820	0/0:36,0:35:86.40:0,86,1294	0/1:40,0:38:0.07:0,0,473	0/1:12,0:12:11.20:11,0,51	0/0:39,0:36:80.56:0,81,1166	0/0:22,0:21:51.15:0,51,729	0/1:23,3:25:51.28:51,0,198	0/1:25,1:24:35:35,0,285	0/1:25,3:28:58.84:59,0,185	0/1:29,3:32:66.20:66,0,103	0/1:13,1:12:16.03:16,0,155	0/1:23,0:13:3.81:4,0,217	0/0:29,1:27:9.32:0,9,274	0/0:71,0:66:17.52:0,18,223	0/0:37,0:34:20.89:0,21,271	0/0:18,0:16:23.40:0,23,312	0/0:64,0:63:99:0,138,2014	0/0:50,0:48:50.32:0,50,759	0/1:34,1:30:87.32:87,0,279	0/1:9,1:10:22.02:22,0,174	1/1:3,0:2:3.63:10,4,0
chr10	76748373	.	ATG	A	2895.72	PASS	AB=0.864;AC=37;AF=0.712;AN=52;BaseQRankSum=7.491;DP=736;FS=5.837;HRun=0;HaplotypeScore=134.3328;InbreedingCoeff=-0.0040;MQ=61.66;MQ0=10;MQRankSum=-0.787;QD=4.62;ReadPosRankSum=3.358;VQSLOD=2.5101;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:44:17:77,17,0	1/1:3,1:6:6.02:66,6,0	./.	0/0:39,0:25:2.88:0,3,15	1/1:16,0:22:5.31:24,5,0	1/1:17,8:24:6.02:66,6,0	1/1:30,4:36:11.72:306,12,0	1/1:25,0:25:5.93:50,6,0	0/1:23,4:27:65.78:66,0,291	0/1:19,7:25:10.05:116,0,10	0/1:10,0:10:14.95:27,0,15	0/1:26,0:26:28.61:29,0,327	0/0:27,2:29:1.98:0,2,388	0/1:10,5:16:27.65:84,0,28	1/1:25,9:35:44.89:411,45,0	1/1:20,12:34:26.74:259,27,0	0/1:19,6:24:7.08:98,0,7	1/1:12,13:26:18.62:267,19,0	1/1:18,4:22:9.02:98,9,0	1/1:6,3:9:9.02:99,9,0	1/1:52,4:56:22.91:359,23,0	0/0:18,0:18:9:0,9,103	0/1:19,0:20:13.42:13,0,205	0/1:35,9:44:47.23:47,0,533	1/1:16,0:28:14.33:75,14,0	0/1:25,7:32:26.84:160,0,27	1/1:19,12:32:9.33:255,9,0	./.
chr10	76749152	.	A	AGTGT	1323.21	PASS	AB=0.999;AC=31;AF=0.574;AN=54;BaseQRankSum=-9.742;DP=626;FS=8.213;HRun=0;HaplotypeScore=173.5164;InbreedingCoeff=-0.2109;MQ=63.02;MQ0=12;MQRankSum=5.863;QD=2.41;ReadPosRankSum=3.211;VQSLOD=1.8323;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:19.71:161,20,0	0/1:8,0:8:10.38:10,0,37	1/1:40,0:14:5.91:44,6,0	0/1:42,0:20:49.85:60,0,50	1/1:20,1:23:19.88:219,20,0	0/0:12,0:12:0.47:0,0,1	1/1:22,0:22:2.76:88,3,0	1/1:21,0:20:7.59:120,8,0	0/1:22,0:22:8.50:8,0,114	0/1:25,0:25:26.08:63,0,26	0/0:13,0:13:2.51:0,3,7	0/1:17,0:17:40.87:41,0,80	0/1:14,0:14:7.79:8,0,70	1/1:20,0:20:11.15:98,11,0	0/1:27,0:27:23.36:23,0,76	0/1:21,0:21:29.62:30,0,75	0/0:29,0:29:18.83:0,19,116	0/1:12,0:12:14.73:33,0,15	0/1:15,0:15:0.82:23,0,1	0/1:28,0:28:78.37:78,0,185	1/1:37,0:36:9.94:138,10,0	0/1:26,0:26:82.48:82,0,161	0/0:20,0:20:14.81:0,15,140	0/1:31,0:31:54.98:55,0,108	1/1:9,7:18:2.92:27,3,0	0/1:20,0:20:8.55:9,0,16	0/1:24,0:23:22.44:63,0,22	./.
chr10	76749172	.	TGC	T	8016.02	PASS	AB=0.970;AC=47;AF=0.870;AN=54;BaseQRankSum=-6.622;DP=646;FS=0.593;HRun=0;HaplotypeScore=158.2787;InbreedingCoeff=-0.1699;MQ=50.41;MQ0=13;MQRankSum=-0.856;QD=12.41;ReadPosRankSum=-8.003;VQSLOD=2.9101;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:39:31:337,31,0	1/1:4,4:8:19.24:160,19,0	1/1:42,0:9:17.79:127,18,0	0/1:41,0:11:77.35:77,0,86	1/1:23,0:23:31.50:301,31,0	1/1:11,3:14:29.92:239,30,0	1/1:17,5:22:41.82:332,42,0	1/1:22,1:22:62.38:497,62,0	0/1:18,1:19:43.81:234,0,44	1/1:23,0:23:11.87:379,12,0	1/1:0,10:10:9.02:103,9,0	0/1:14,1:15:34.81:163,0,35	0/1:15,0:15:8.21:144,0,8	1/1:17,2:20:44.70:343,45,0	1/1:16,8:28:53.69:433,54,0	1/1:16,3:23:40.29:444,40,0	1/1:3,3:31:23.69:182,24,0	1/1:12,3:15:44.62:345,45,0	1/1:0,0:11:29.81:236,30,0	0/1:28,1:29:84.47:194,0,84	1/1:42,3:46:83.28:670,83,0	0/1:31,0:31:84.33:333,0,84	0/1:14,1:15:59.67:156,0,60	1/1:36,0:36:2.51:367,3,0	1/1:14,0:14:1.64:44,2,0	1/1:20,4:24:71.64:586,72,0	1/1:26,2:28:57.73:592,58,0	./.
chr10	76749176	.	TGA	T	7855.81	PASS	AB=1.000;AC=47;AF=0.870;AN=54;BaseQRankSum=-5.773;DP=642;FS=1.270;HRun=0;HaplotypeScore=162.1589;InbreedingCoeff=-0.1688;MQ=49.51;MQ0=14;MQRankSum=-1.653;QD=12.24;ReadPosRankSum=-8.462;VQSLOD=2.8287;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:40:30.15:336,30,0	1/1:4,4:8:18:157,18,0	1/1:40,1:11:9.74:152,10,0	0/1:37,0:8:47.92:63,0,48	1/1:22,0:22:27.75:268,28,0	1/1:12,3:15:35.86:281,36,0	1/1:15,5:20:41.72:326,42,0	1/1:21,1:21:52.33:409,52,0	0/1:20,0:20:33.03:257,0,33	1/1:22,0:22:8.83:374,9,0	1/1:10,0:10:8.98:97,9,0	0/1:16,0:16:34.29:163,0,34	0/1:15,0:15:7.20:147,0,7	1/1:17,2:19:41.70:316,42,0	1/1:24,6:30:57.53:453,58,0	1/1:21,3:24:43.27:465,43,0	1/1:28,2:30:23.69:182,24,0	1/1:13,3:16:47.26:361,47,0	1/1:12,0:11:26.91:213,27,0	0/1:26,0:26:89.87:149,0,90	1/1:43,3:45:78.30:644,78,0	0/1:31,0:31:89.55:328,0,90	0/1:17,0:17:53.69:197,0,54	1/1:39,0:39:5.90:387,6,0	1/1:13,0:13:1.64:44,2,0	1/1:21,3:24:69.42:546,69,0	1/1:26,0:26:52.15:541,52,0	./.
chr10	76749302	.	C	CA	1270.91	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.572;DP=647;FS=2.232;HRun=4;HaplotypeScore=97.8189;InbreedingCoeff=0.9994;MQ=79.85;MQ0=0;MQRankSum=-2.045;QD=29.56;ReadPosRankSum=-0.177;VQSLOD=3.1829;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1190	0/0:9,0:9:27.08:0,27,306	0/0:25,0:26:58.01:0,58,629	0/0:25,0:25:60.16:0,60,669	1/1:0,19:19:45.06:572,45,0	0/0:22,0:22:63.18:0,63,714	0/0:30,0:30:78.20:0,78,875	0/0:19,0:19:54.14:0,54,603	0/0:26,0:26:75.20:0,75,840	0/0:17,0:17:42.12:0,42,476	0/0:25,0:25:72.15:0,72,794	0/0:23,0:23:63.18:0,63,714	0/0:20,0:20:57.15:0,57,635	0/0:17,0:17:42.10:0,42,467	0/0:16,0:16:45.11:0,45,501	0/0:22,0:22:57.13:0,57,628	0/0:25,0:25:72.19:0,72,806	0/0:25,0:25:69.20:0,69,782	0/0:18,0:18:45.11:0,45,495	0/0:24,0:24:60.17:0,60,680	0/0:26,0:26:75.20:0,75,842	0/0:24,0:24:54.14:0,54,603	0/0:22,0:22:54.56:0,55,597	0/0:19,0:19:48.10:0,48,531	1/1:2,22:24:60.20:820,60,0	0/0:40,0:40:99:0,105,1171	0/0:28,0:28:84.21:0,84,933	0/0:19,0:19:51.14:0,51,579
chr10	76749707	.	CA	C	1172.26	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.684;DP=608;FS=1.347;HRun=2;HaplotypeScore=218.8437;InbreedingCoeff=0.9700;MQ=81.63;MQ0=0;MQRankSum=0.314;QD=30.06;ReadPosRankSum=-0.438;VQSLOD=2.9156;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,1515	0/0:12,0:12:35.89:0,36,419	0/0:26,0:26:67.81:0,68,723	0/0:18,0:18:39.09:0,39,583	1/1:2,20:22:53.88:655,54,0	0/0:26,0:26:55.67:0,56,648	0/0:10,0:10:9.02:0,9,105	0/0:25,0:25:44.98:0,45,495	0/0:19,0:19:53.98:0,54,659	0/0:33,0:33:93.68:0,94,1174	0/0:17,0:17:44.42:0,44,528	0/0:23,0:23:62.45:0,62,713	0/0:21,0:21:60.12:0,60,733	0/0:19,0:19:53.74:0,54,654	0/0:26,0:26:68.80:0,69,812	0/0:14,0:14:33.10:0,33,404	0/0:21,0:21:53.41:0,53,681	0/0:17,0:17:45.14:0,45,585	0/0:14,0:14:30.09:0,30,375	0/0:27,0:27:73.69:0,74,922	0/0:14,0:14:31.96:0,32,316	0/0:22,0:22:59.79:0,60,682	0/0:31,0:31:88.16:0,88,1069	0/0:24,0:24:55.73:0,56,703	1/1:0,17:17:51.12:639,51,0	0/0:30,0:30:75.34:0,75,951	0/0:25,0:24:66.18:0,66,836	0/0:12,0:12:33.11:0,33,432
chr10	76749798	.	A	AAT	18115.28	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=13.206;DP=586;FS=6.065;HRun=0;HaplotypeScore=93.3276;InbreedingCoeff=0.9996;MQ=74.36;MQ0=0;MQRankSum=-5.592;QD=49.23;ReadPosRankSum=2.800;VQSLOD=5.8067;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.24:0,93,1352	1/1:0,13:13:36.12:703,36,0	0/0:17,0:17:30.30:0,30,464	0/0:13,0:13:36.05:0,36,463	0/0:30,0:30:87.19:0,87,1244	1/1:0,18:18:39.13:764,39,0	1/1:1,23:24:63.22:1233,63,0	1/1:0,28:28:78.02:1425,78,0	0/0:18,0:18:54.11:0,54,774	1/1:6,20:26:71.97:1276,72,0	1/1:0,21:22:60.16:1133,60,0	0/0:22,0:22:66.08:0,66,921	0/0:9,0:9:24.08:0,24,367	1/1:1,23:24:63.18:1233,63,0	1/1:1,15:17:39.13:760,39,0	1/1:0,19:19:48.16:940,48,0	1/1:0,19:19:42.14:822,42,0	1/1:1,15:16:43.96:804,44,0	1/1:0,20:21:59.95:885,60,0	1/1:1,22:24:58.27:1269,58,0	1/1:0,21:22:45.15:880,45,0	0/0:30,0:30:87.20:0,87,1239	0/0:19,0:19:57.16:0,57,828	0/0:13,0:13:39.10:0,39,554	0/0:16,0:16:45.10:0,45,659	1/1:10,20:30:87.14:1470,87,0	1/1:0,20:21:60.21:1165,60,0	1/1:0,23:23:69.24:1353,69,0
chr10	76750148	.	CTA	C	15828.59	PASS	AB=0.529;AC=32;AF=0.571;AN=56;BaseQRankSum=18.793;DP=708;FS=10.030;HRun=0;HaplotypeScore=110.0707;InbreedingCoeff=0.8762;MQ=57.29;MQ0=2;MQRankSum=-1.726;QD=40.69;ReadPosRankSum=2.390;VQSLOD=6.5192;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,2613	0/1:1,8:9:30.86:340,0,31	0/0:25,0:19:54.16:0,54,984	0/0:28,0:21:60.20:0,60,1062	0/0:23,0:23:66.23:0,66,1256	1/1:0,19:19:54.18:827,54,0	1/1:0,17:17:45.15:689,45,0	1/1:0,25:25:75.24:1119,75,0	0/0:22,0:22:66.23:0,66,1275	1/1:1,27:28:81.25:1213,81,0	1/1:0,23:23:57.19:873,57,0	0/0:27,0:27:81.28:0,81,1544	0/0:29,0:29:87.30:0,87,1676	1/1:0,25:25:69.23:1057,69,0	1/1:0,28:28:84.28:1278,84,0	0/1:2,17:19:3.45:727,0,3	1/1:1,40:41:99:1692,111,0	1/1:1,21:22:60.20:913,60,0	1/1:1,18:18:51.12:724,51,0	1/1:0,21:21:48.16:726,48,0	1/1:1,33:34:75.25:1149,75,0	0/0:27,0:27:81.28:0,81,1546	0/0:20,0:20:60.21:0,60,1158	0/0:50,0:50:99:0,151,2885	0/0:20,0:20:57.18:0,57,1068	1/1:2,30:32:87.27:1308,87,0	1/1:0,19:19:54.18:827,54,0	1/1:0,8:8:24.08:367,24,0
chr10	76750231	.	AAAAC	A	5208.18	PASS	AC=36;AF=0.667;AN=54;BaseQRankSum=15.113;DP=625;FS=4.205;HRun=0;HaplotypeScore=245.7316;InbreedingCoeff=0.9445;MQ=57.49;MQ0=2;MQRankSum=-10.229;QD=14.75;ReadPosRankSum=2.953;VQSLOD=4.5089;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,1:43:38.91:0,39,1820	1/1:8,0:8:12.01:112,12,0	0/0:21,0:18:21.07:0,21,419	0/0:20,0:17:30.07:0,30,631	1/1:8,23:30:69.20:1084,69,0	1/1:21,0:21:42.05:391,42,0	1/1:18,0:18:11.69:94,12,0	1/1:20,0:18:3:28,3,0	0/0:29,0:29:63.22:0,63,1483	1/1:24,0:24:42.05:391,42,0	1/1:22,0:22:15.02:140,15,0	0/0:31,0:31:69.22:0,69,1585	0/0:28,0:28:69.24:0,69,1636	1/1:12,0:12:21.02:195,21,0	1/1:23,0:23:32.78:291,33,0	1/1:20,0:20:30.03:279,30,0	1/1:19,0:19:18.02:167,18,0	1/1:18,0:17:21.50:196,21,0	1/1:17,0:16:15.02:139,15,0	1/1:19,0:19:21.02:195,21,0	./.	0/0:35,0:35:78.22:0,78,1732	0/0:21,0:21:36.12:0,36,866	0/0:36,0:36:78.25:0,78,1777	1/1:9,17:26:45.15:725,45,0	1/1:27,0:27:36.04:335,36,0	1/1:25,0:25:38.87:362,39,0	1/1:3,0:3:9.01:84,9,0
chr10	76750234	.	AC	A	2247.12	PASS	AB=0.719;AC=20;AF=0.357;AN=56;BaseQRankSum=16.490;DP=597;FS=10.766;HRun=1;HaplotypeScore=208.4079;InbreedingCoeff=-0.3026;MQ=56.68;MQ0=2;MQRankSum=-9.980;QD=6.61;ReadPosRankSum=7.200;VQSLOD=-0.4347;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,105,1642	0/1:3,4:7:1.02:96,0,1	0/0:21,0:18:53.99:0,54,702	0/0:20,0:17:47.99:0,48,622	0/1:30,0:29:53.57:54,0,192	0/1:7,14:21:5.75:285,0,6	0/1:9,8:17:77.93:78,0,84	0/1:15,1:14:22.72:23,0,73	0/0:30,0:30:90.27:0,90,1254	0/1:8,14:22:39.95:256,0,40	0/1:8,13:21:66.72:67,0,122	0/0:30,0:30:90.27:0,90,1252	0/0:27,0:27:81.24:0,81,1133	0/1:4,7:11:15.48:126,0,15	0/1:7,14:21:46.54:165,0,47	0/1:10,10:20:88.34:188,0,88	0/1:11,7:18:67.30:119,0,67	0/1:10,8:17:67.54:129,0,68	0/1:12,5:16:53.10:120,0,53	0/1:8,9:17:44.43:147,0,44	0/1:4,1:4:2.95:15,0,3	0/0:32,0:32:96.31:0,96,1365	0/0:19,0:19:57.19:0,57,813	0/0:36,0:36:88.42:0,88,1472	0/1:26,0:26:14.44:14,0,280	0/1:14,12:26:60.81:230,0,61	0/1:9,14:24:57.21:230,0,57	1/1:0,3:3:8.97:70,9,0
chr10	76750236	.	AAACAAACAAACAAAC	A	13974.26	PASS	AB=0.670;AC=17;AF=0.304;AN=56;BaseQRankSum=17.432;DP=593;FS=4.863;HRun=0;HaplotypeScore=331.4100;InbreedingCoeff=-0.2913;MQ=54.79;MQ0=2;MQRankSum=-15.447;QD=51.38;ReadPosRankSum=7.892;VQSLOD=2.9093;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,7265	0/1:3,4:7:17.65:433,0,18	0/0:19,0:16:42.14:0,42,1832	0/0:20,0:17:45.15:0,45,2733	0/0:30,0:29:87.30:0,87,3336	0/1:6,14:20:42.93:1523,0,43	0/1:7,8:15:94.92:502,0,95	0/1:15,1:14:83.23:83,0,146	0/0:29,0:29:87.30:0,87,5466	0/1:8,14:22:95.12:1515,0,95	0/1:8,13:21:88.85:826,0,89	0/0:32,0:32:96.33:0,96,6066	0/0:28,0:28:81.28:0,81,5669	0/1:4,7:11:43.08:756,0,43	0/1:7,14:21:58.46:1269,0,58	0/1:9,10:19:99:1065,0,145	0/1:10,7:17:99:672,0,107	0/1:10,8:17:99:823,0,122	0/1:12,5:16:99:530,0,115	0/1:8,9:17:52.18:889,0,52	0/0:4,1:4:2.87:0,3,15	0/0:32,0:32:93.32:0,93,6046	0/0:19,0:19:57.19:0,57,3232	0/0:38,0:38:99:0,111,6707	0/0:27,0:27:71.86:0,72,2428	0/1:13,11:24:99:1310,0,127	0/1:10,14:24:98.28:1437,0,98	1/1:0,3:3:9.03:340,9,0
chr10	76750495	.	A	ATT	22434.15	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-15.323;DP=708;FS=1.965;HRun=0;HaplotypeScore=72.3292;InbreedingCoeff=0.9998;MQ=86.49;MQ0=1;MQRankSum=-5.091;QD=53.67;ReadPosRankSum=3.124;VQSLOD=5.6511;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.26:0,84,1321	1/1:1,10:11:27.09:549,27,0	0/0:23,0:23:63.16:0,63,926	0/0:24,0:24:69.22:0,69,1088	0/0:26,0:26:75.24:0,75,1197	1/1:0,22:23:60.21:1213,60,0	1/1:0,23:24:60.21:1213,60,0	1/1:4,27:31:84.29:1642,84,0	0/0:30,0:30:90.30:0,90,1447	1/1:0,34:33:99:2008,99,0	1/1:2,21:25:63.13:1188,63,0	0/0:30,0:30:84.27:0,84,1345	0/0:23,0:23:69.23:0,69,1101	1/1:0,24:26:69.24:1402,69,0	1/1:2,28:30:78.22:1533,78,0	1/1:1,20:22:54.15:1038,54,0	1/1:0,34:35:96.33:1951,96,0	1/1:3,30:33:81.28:1645,81,0	1/1:0,16:16:48.16:960,48,0	1/1:0,25:27:72.25:1427,72,0	1/1:1,21:23:63.17:1239,63,0	0/0:32,0:32:93.30:0,93,1490	0/0:22,0:22:66.23:0,66,1074	0/0:26,0:26:78.25:0,78,1241	0/0:25,0:25:72.25:0,72,1175	1/1:0,17:18:54.17:1060,54,0	1/1:1,27:28:81.28:1633,81,0	1/1:0,12:12:36.12:731,36,0
chr10	76750974	.	C	CTCCT	1527.96	PASS	AB=0.916;AC=16;AF=0.286;AN=56;BaseQRankSum=8.756;DP=361;FS=26.732;HRun=0;HaplotypeScore=150.1481;InbreedingCoeff=-0.0950;MQ=72.47;MQ0=5;MQRankSum=-7.588;QD=10.05;ReadPosRankSum=-1.863;VQSLOD=1.0816;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:62.89:0,63,1102	1/1:2,0:2:4.25:37,4,0	0/0:33,0:24:37.64:0,38,869	0/0:36,0:27:49.11:0,49,741	0/0:12,0:12:26.03:0,26,515	0/1:8,0:8:5.78:28,0,6	0/1:17,2:19:99:187,0,128	0/1:13,0:15:99:154,0,208	0/0:10,0:10:27.01:0,27,472	0/1:11,3:14:21.23:418,0,21	0/1:12,0:12:17.17:17,0,110	0/0:12,0:12:34.67:0,35,643	0/0:15,0:15:42.13:0,42,770	0/0:13,0:13:17.62:0,18,185	0/0:15,0:15:17.77:0,18,130	0/1:6,2:8:58.68:144,0,59	0/1:8,1:9:69.66:91,0,70	0/0:7,0:7:10.29:0,10,109	0/1:8,0:8:51.70:52,0,95	0/0:3,0:3:5.89:0,6,37	0/1:6,0:7:46.19:46,0,47	0/1:13,0:13:32.38:32,0,433	0/1:12,0:12:4.92:5,0,312	0/0:15,0:15:37.02:0,37,772	0/0:12,0:11:31.66:0,32,583	0/1:12,1:14:96.59:321,0,97	0/0:4,0:4:8.68:0,9,48	1/1:7,2:9:5.34:155,5,0
chr10	76750977	.	TTTA	T	2027.63	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=10.357;DP=344;FS=46.460;HRun=0;HaplotypeScore=130.0678;InbreedingCoeff=0.7873;MQ=71.69;MQ0=4;MQRankSum=-8.244;QD=11.79;ReadPosRankSum=0.430;VQSLOD=1.5499;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:52.22:0,52,1345	1/1:2,0:2:3.48:34,3,0	0/0:32,0:23:54.69:0,55,1067	0/0:35,0:26:64.19:0,64,1124	0/0:11,1:12:12.27:0,12,369	1/1:7,0:7:6.45:52,6,0	1/1:11,8:19:26.19:259,26,0	1/1:13,3:15:26.29:238,26,0	0/0:10,0:10:26.76:0,27,540	1/1:9,5:13:25.18:195,25,0	1/1:12,0:12:23.91:229,24,0	0/0:12,0:12:31.68:0,32,770	0/0:14,0:14:42.14:0,42,928	1/1:13,0:13:13.01:113,13,0	1/1:10,4:14:15.04:174,15,0	1/1:8,0:8:9.36:95,9,0	1/1:7,1:8:17.62:185,18,0	1/1:4,1:5:9.85:69,10,0	1/1:6,0:6:6.89:69,7,0	1/1:1,0:3:5.98:54,6,0	1/1:2,5:7:11.99:127,12,0	0/0:12,0:12:4.83:0,5,538	0/0:11,0:11:12.71:0,13,437	0/1:15,0:15:4.11:4,0,879	0/0:12,0:11:12.93:0,13,443	1/1:9,5:14:28.50:266,29,0	1/1:3,1:4:6.89:66,7,0	1/1:4,1:5:0.60:3,1,0
chr10	76750978	.	T	TCC	1150.08	PASS	AB=0.923;AC=30;AF=0.536;AN=56;BaseQRankSum=10.238;DP=330;FS=37.243;HRun=0;HaplotypeScore=126.4030;InbreedingCoeff=0.6437;MQ=72.84;MQ0=4;MQRankSum=-7.216;QD=7.99;ReadPosRankSum=3.460;VQSLOD=1.0794;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.12:0,63,971	1/1:1,1:2:5.23:41,5,0	0/0:32,0:23:22.92:0,23,678	0/0:35,0:26:55.23:0,55,802	0/0:12,0:12:29.12:0,29,440	1/1:2,5:7:19.29:168,19,0	0/1:15,2:17:17.13:109,0,17	0/1:13,0:12:17.88:71,0,18	0/0:10,0:10:27.09:0,27,413	1/1:13,0:13:15.11:74,15,0	1/1:7,4:11:19.55:139,20,0	0/0:12,0:12:21.20:0,21,523	0/0:14,0:14:34.34:0,34,626	0/1:11,1:12:0.50:48,0,1	1/1:13,0:13:9.44:44,9,0	1/1:7,1:8:6.12:71,6,0	1/1:5,3:8:7.95:89,8,0	1/1:2,2:4:11.69:113,12,0	1/1:2,1:3:3.73:82,4,0	1/1:2,1:3:5.56:30,6,0	0/1:6,1:7:3.58:25,0,4	0/0:12,0:12:26.96:0,27,406	0/0:11,0:11:6.70:0,7,295	0/0:14,0:14:20.84:0,21,615	0/0:12,0:11:32.47:0,32,496	1/1:12,1:13:18.33:130,18,0	1/1:4,0:4:8.73:51,9,0	1/1:3,2:5:7.37:69,7,0
chr10	76750979	.	T	TC	980.75	PASS	AB=0.866;AC=23;AF=0.411;AN=56;BaseQRankSum=11.382;DP=328;FS=22.133;HRun=0;HaplotypeScore=122.1771;InbreedingCoeff=0.4069;MQ=72.56;MQ0=4;MQRankSum=-7.665;QD=7.72;ReadPosRankSum=1.963;VQSLOD=2.0441;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.17:0,60,814	1/1:1,1:2:5.97:52,6,0	0/0:30,1:22:26.34:0,26,595	0/0:35,0:26:62.86:0,63,705	0/0:12,0:12:13.49:0,13,332	1/1:1,5:7:14.46:98,14,0	0/1:15,2:17:8.58:167,0,9	0/1:13,0:12:18.97:93,0,19	0/0:10,0:10:27.07:0,27,346	1/1:14,0:13:24.64:212,25,0	1/1:6,4:10:1.96:66,2,0	0/0:13,0:13:30.31:0,30,456	0/0:14,0:14:30.09:0,30,531	0/1:11,1:12:3.99:4,0,33	0/0:13,0:13:8.20:0,8,26	0/1:7,1:8:3.08:47,0,3	0/1:5,3:8:7.16:46,0,7	1/1:2,2:4:5.65:51,6,0	0/1:2,1:3:9.01:12,0,9	0/0:2,1:3:1.73:0,2,5	0/1:6,1:7:2.09:13,0,2	0/0:12,0:12:17.79:0,18,326	0/0:11,0:11:0.84:0,1,216	0/0:14,0:14:41.63:0,42,552	0/0:12,0:11:33:0,33,405	1/1:12,1:13:3.92:219,4,0	1/1:4,0:4:1.48:4,1,0	1/1:3,2:5:11.71:69,12,0
chr10	76750982	.	CTTT	C	1543.77	PASS	AB=0.939;AC=26;AF=0.464;AN=56;BaseQRankSum=8.773;DP=327;FS=17.004;HRun=3;HaplotypeScore=129.6879;InbreedingCoeff=0.4493;MQ=72.02;MQ0=4;MQRankSum=-7.394;QD=11.11;ReadPosRankSum=0.246;VQSLOD=-0.6348;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.17:0,60,1388	1/1:2,0:2:3.48:34,3,0	0/0:29,0:20:44.34:0,44,832	0/0:35,0:26:45.30:0,45,856	0/0:12,1:13:28.82:0,29,588	1/1:7,0:7:5.77:34,6,0	0/1:15,2:17:1.83:217,0,2	0/1:12,2:13:13.39:139,0,13	0/0:9,0:9:11.10:0,11,528	0/1:13,0:13:24.23:113,0,24	1/1:9,0:9:20.85:199,21,0	0/0:13,0:13:29.70:0,30,666	0/0:12,0:12:36.12:0,36,857	1/1:12,0:12:12.99:114,13,0	1/1:10,3:13:15.04:176,15,0	0/1:8,0:8:18.58:80,0,19	1/1:8,0:8:5.41:154,5,0	1/1:3,1:4:9.61:66,10,0	0/1:4,0:4:31.63:32,0,32	1/1:3,0:3:3.01:34,3,0	1/1:6,1:7:11.83:109,12,0	0/0:12,0:12:13.89:0,14,470	0/0:11,0:11:27.34:0,27,556	0/0:13,0:13:39.12:0,39,840	0/0:15,0:14:5.91:0,6,657	0/1:12,1:13:19.04:173,0,19	1/1:3,1:4:6.88:64,7,0	0/0:4,1:5:3.41:0,3,28
chr10	76751001	.	C	CT	1033.56	PASS	AB=0.808;AC=22;AF=0.393;AN=56;BaseQRankSum=8.626;DP=294;FS=12.505;HRun=1;HaplotypeScore=114.4866;InbreedingCoeff=-0.2153;MQ=60.75;MQ0=3;MQRankSum=-4.835;QD=5.91;ReadPosRankSum=3.150;VQSLOD=-0.5199;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.08:0,45,561	1/1:0,2:2:5.95:54,6,0	0/0:14,0:9:5.23:0,5,67	0/0:18,0:12:14.86:0,15,101	0/1:13,0:13:21.24:21,0,207	0/1:2,6:8:2.01:148,0,2	0/1:11,5:16:43.84:111,0,44	0/1:11,5:11:52.52:53,0,166	0/0:8,0:10:24.08:0,24,309	0/1:12,1:13:86.13:86,0,124	0/1:3,4:7:17.53:18,0,19	0/0:12,0:12:23.84:0,24,296	0/0:13,0:13:33.09:0,33,401	0/1:9,2:11:9.38:65,0,9	1/1:12,2:13:2.35:19,2,0	0/1:8,1:9:23.55:24,0,93	0/1:5,3:8:1.68:118,0,2	0/1:2,2:4:24.46:71,0,24	0/1:5,3:5:56.27:56,0,73	1/1:2,1:3:2.37:8,2,0	0/0:3,1:4:8.93:0,9,80	0/1:12,0:12:9.39:9,0,277	0/1:9,0:10:43.57:44,0,182	0/0:11,0:11:12.47:0,12,138	0/0:19,0:18:31.15:0,31,438	0/1:7,4:11:86.66:196,0,87	0/1:4,0:4:17.02:19,0,17	0/1:3,3:6:62.91:75,0,63
chr10	76751004	.	C	CT	1594.34	PASS	AB=0.947;AC=29;AF=0.518;AN=56;BaseQRankSum=8.364;DP=276;FS=8.112;HRun=1;HaplotypeScore=108.0038;InbreedingCoeff=0.0179;MQ=60.02;MQ0=3;MQRankSum=-3.694;QD=8.01;ReadPosRankSum=1.407;VQSLOD=0.6150;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:39.13:0,39,501	1/1:2,0:2:5.98:58,6,0	0/1:10,0:5:0.01:0,0,0	0/0:16,0:9:8.69:0,9,66	0/1:12,1:13:22:22,0,210	1/1:7,0:8:18.87:185,19,0	0/1:14,2:16:36.82:162,0,37	0/1:15,0:10:58.39:58,0,126	0/0:10,0:10:24.08:0,24,308	0/1:11,1:12:99:102,0,123	1/1:5,2:7:17.12:148,17,0	0/0:12,0:12:24.05:0,24,281	0/0:11,0:11:30.51:0,31,352	1/1:3,8:11:11.95:135,12,0	1/1:3,9:11:2.98:44,3,0	0/1:5,4:9:57.38:79,0,57	1/1:6,2:8:15.90:171,16,0	0/1:3,0:3:15.74:78,0,16	0/1:8,0:5:53.14:69,0,53	1/1:3,0:3:5.50:42,6,0	0/0:4,0:4:3.01:0,3,37	0/1:11,0:12:14.98:15,0,218	0/1:10,0:10:54.47:54,0,151	0/0:8,1:9:9.50:0,10,118	0/1:17,1:18:7.18:7,0,376	0/1:11,0:11:63.87:202,0,64	1/1:2,2:4:5.99:66,6,0	0/1:6,0:6:64.60:71,0,65
chr10	76751016	.	C	CT	567.39	PASS	AB=0.905;AC=30;AF=0.600;AN=50;BaseQRankSum=3.827;DP=167;FS=6.307;HRun=0;HaplotypeScore=74.3048;InbreedingCoeff=0.3360;MQ=37.24;MQ0=1;MQRankSum=0.099;QD=5.25;ReadPosRankSum=-0.208;VQSLOD=2.1522;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:0.11:0,0,31	1/1:0,2:2:4.56:37,5,0	./.	0/1:2,0:1:0:0,0,0	1/1:10,0:10:4.34:10,4,0	1/1:1,6:7:12.47:111,12,0	1/1:2,5:7:8.66:78,9,0	0/0:5,4:4:2.79:0,3,20	0/1:8,0:8:14.08:14,0,14	0/1:7,1:8:10.44:11,0,10	1/1:0,3:3:5.55:28,6,0	0/0:8,0:8:5.42:0,5,44	1/1:11,0:11:6.46:26,6,0	0/1:6,1:7:0:0,0,0	./.	0/0:6,0:6:0:0,0,0	1/1:1,3:4:10.57:97,11,0	1/1:0,2:2:6:56,6,0	0/0:1,1:1:2.98:0,3,22	0/1:2,0:2:0:0,0,0	0/1:1,1:2:0:0,0,0	0/0:8,0:8:2.23:0,2,18	1/1:8,0:8:0.68:15,1,0	0/0:6,0:6:2.97:0,3,20	1/1:14,0:13:5.04:42,5,0	1/1:4,3:7:14.92:112,15,0	./.	1/1:1,3:4:6.01:56,6,0
chr10	76752770	.	AAAAAAG	A	3663.06	PASS	AB=0.950;AC=30;AF=0.556;AN=54;BaseQRankSum=-6.486;DP=219;FS=14.539;HRun=0;HaplotypeScore=47.3699;InbreedingCoeff=0.6465;MQ=45.82;MQ0=0;MQRankSum=-4.017;QD=25.98;ReadPosRankSum=0.696;VQSLOD=1.3199;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:45.12:0,45,1265	./.	0/0:1,0:1:3:0,3,25	0/0:4,0:2:9.48:0,9,163	0/0:8,0:8:24.04:0,24,457	1/1:9,0:9:26.98:271,27,0	1/1:9,0:9:20.41:183,20,0	1/1:1,13:13:39.07:422,39,0	0/0:7,0:7:21.07:0,21,627	1/1:13,0:13:39.10:413,39,0	1/1:1,0:1:3.01:32,3,0	0/0:8,0:8:24.08:0,24,770	0/0:7,0:7:18.05:0,18,367	1/1:12,0:12:36.09:405,36,0	1/1:12,0:12:30.08:366,30,0	1/1:6,0:6:18.04:189,18,0	0/1:12,0:12:10.36:246,0,10	1/1:5,0:5:14.91:143,15,0	1/1:4,0:4:9.02:96,9,0	1/1:8,0:8:23.96:230,24,0	1/1:13,0:13:23.82:220,24,0	0/0:8,0:8:24.07:0,24,709	0/1:3,1:4:4.18:4,0,280	0/0:7,0:7:9.02:0,9,201	0/0:12,0:12:27.95:0,28,630	1/1:7,0:7:21.05:222,21,0	0/1:10,0:10:21.51:194,0,22	0/1:2,0:2:18.34:26,0,18
chr10	76752776	.	G	GA	4304.32	PASS	AB=0.849;AC=37;AF=0.685;AN=54;BaseQRankSum=-3.606;DP=263;FS=15.193;HRun=10;HaplotypeScore=32.2233;InbreedingCoeff=0.5823;MQ=52.83;MQ0=0;MQRankSum=-2.263;QD=21.00;ReadPosRankSum=0.190;VQSLOD=3.7373;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:44.94:0,45,369	./.	0/1:4,0:4:0.55:1,0,41	0/1:4,0:2:13.53:14,0,37	1/1:0,7:8:23.93:238,24,0	1/1:1,9:10:30:294,30,0	1/1:3,8:11:20.37:182,20,0	1/1:16,0:15:39.07:398,39,0	0/0:8,0:8:20.96:0,21,172	1/1:1,14:15:42.10:445,42,0	1/1:0,1:1:3.01:32,3,0	0/0:8,0:8:23.97:0,24,197	0/0:8,0:8:17.97:0,18,148	1/1:0,14:14:36.09:381,36,0	1/1:0,14:14:30.08:317,30,0	1/1:0,6:6:18.04:189,18,0	1/1:7,7:14:13.21:285,13,0	1/1:1,6:7:14.87:141,15,0	1/1:2,6:8:20.87:196,21,0	1/1:3,6:9:21.04:216,21,0	1/1:9,8:17:26.93:267,27,0	0/0:9,0:9:26.97:0,27,221	0/1:6,0:6:1.25:1,0,83	0/0:8,0:8:11.94:0,12,93	1/1:2,13:15:9.34:297,9,0	1/1:2,7:9:1.42:199,1,0	0/1:3,8:11:39.26:191,0,39	0/1:3,3:6:20.93:21,0,44
chr10	76753544	.	AGCTAGGTGCTAGGT	A	939.89	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.908;DP=421;FS=15.381;HRun=0;HaplotypeScore=149.0024;InbreedingCoeff=0.8545;MQ=72.53;MQ0=6;MQRankSum=-4.813;QD=49.47;ReadPosRankSum=2.436;VQSLOD=2.7700;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:66.19:0,66,4159	0/0:3,0:3:6.02:0,6,402	0/0:18,0:9:24.08:0,24,1382	0/0:20,0:11:30.08:0,30,1027	1/1:5,7:13:18.06:676,18,0	0/0:13,0:13:33.07:0,33,2075	0/0:10,0:10:21.07:0,21,1377	0/0:14,0:14:30.08:0,30,1744	0/0:13,0:13:36.12:0,36,2316	0/0:16,0:16:45.15:0,45,2914	0/0:12,0:11:30.10:0,30,1973	0/0:11,0:11:33.11:0,33,2105	0/0:9,0:9:15.05:0,15,1004	0/0:11,0:11:27.05:0,27,1650	0/0:14,0:14:36.04:0,36,2127	0/0:10,0:9:27.09:0,27,1677	0/0:24,0:24:51.10:0,51,3130	0/0:21,0:20:36.12:0,36,2370	0/0:15,0:15:33.11:0,33,1865	0/0:24,0:24:45.15:0,45,3002	0/0:23,0:23:51.18:0,51,2985	0/0:11,0:11:27.09:0,27,1784	0/0:23,0:23:48.16:0,48,2976	0/0:12,0:12:30.04:0,30,1825	1/1:3,2:6:9.03:375,9,0	0/0:21,0:21:39.13:0,39,2565	0/0:16,0:16:36.12:0,36,2431	0/0:3,0:3:6.02:0,6,416
chr10	76754684	.	G	GGCTCCAGACGGCATGCCA	73537.15	PASS	AB=0.706;AC=39;AF=0.696;AN=56;BaseQRankSum=0.971;DP=660;FS=0.348;HRun=0;HaplotypeScore=274.6289;InbreedingCoeff=0.8851;MQ=68.63;MQ0=0;MQRankSum=-15.808;QD=146.49;ReadPosRankSum=0.350;VQSLOD=3.9550;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,7:35:78.20:5392,78,0	1/1:3,7:11:29.69:2454,30,0	0/0:16,0:16:32.95:0,33,1334	0/0:18,0:18:48.16:0,48,1491	1/1:13,4:17:3.01:261,3,0	1/1:13,9:28:54.18:3819,54,0	1/1:29,5:37:96.26:6795,96,0	1/1:38,0:38:99:6384,111,0	0/0:21,0:21:63.22:0,63,2989	1/1:14,6:28:78.22:4401,78,0	1/1:7,2:11:14.70:782,15,0	0/0:22,0:22:66.18:0,66,2882	0/0:21,0:21:63.22:0,63,3172	1/1:12,10:28:57.19:4337,57,0	1/1:18,9:29:69.24:4784,69,0	0/1:14,8:24:86.70:4633,0,87	1/1:23,5:33:75.26:5248,75,0	1/1:16,8:26:69.23:5489,69,0	1/1:13,2:20:51.12:2163,51,0	1/1:10,4:17:30.10:1829,30,0	1/1:22,2:40:39.13:2345,39,0	0/0:18,0:18:48.15:0,48,2232	0/0:14,0:14:39.12:0,39,1699	0/0:27,0:27:81.19:0,81,3533	1/1:8,9:18:48.16:3118,48,0	1/1:21,5:33:87.23:4834,87,0	1/1:16,5:21:45.11:2901,45,0	1/1:3,4:8:21.07:1568,21,0
chr10	76755470	.	TC	T	434.68	PASS	AB=0.870;AC=8;AF=0.143;AN=56;BaseQRankSum=7.409;DP=484;FS=4.906;HRun=1;HaplotypeScore=104.9233;InbreedingCoeff=0.0050;MQ=51.08;MQ0=15;MQRankSum=-0.427;QD=4.02;ReadPosRankSum=-2.475;VQSLOD=-0.5074;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:8.15:0,8,24	0/0:9,0:9:5.42:0,5,51	0/0:11,0:6:15.52:0,16,188	0/0:9,0:4:12.03:0,12,141	0/0:22,0:21:38.30:0,38,486	0/1:19,1:20:49.89:292,0,50	0/0:21,0:19:1.95:0,2,157	0/1:9,10:18:99:147,0,237	0/0:16,0:16:32.39:0,32,442	0/0:24,0:22:5.60:0,6,485	1/1:16,0:16:4.56:27,5,0	0/0:28,0:28:60.16:0,60,806	0/0:18,0:18:45.57:0,46,582	0/0:13,0:11:6.86:0,7,46	0/0:17,0:17:1.54:0,2,48	0/0:17,1:18:10.08:0,10,76	0/0:11,0:11:7.27:0,7,82	0/1:11,0:10:0.80:1,0,31	0/1:7,5:11:47.75:48,0,212	0/1:20,0:20:2.17:2,0,57	0/0:21,0:21:11.19:0,11,143	0/0:24,0:24:53.62:0,54,710	0/0:16,0:16:41.78:0,42,552	0/0:21,0:19:47.64:0,48,627	0/0:16,0:16:18.49:0,18,227	0/0:24,0:24:21.79:0,22,463	0/0:18,0:18:8.43:0,8,116	0/1:9,1:8:37.89:38,0,133
chr10	76755477	.	C	CTTTTCT	11137.08	PASS	AB=0.698;AC=32;AF=0.571;AN=56;BaseQRankSum=3.600;DP=524;FS=17.225;HRun=0;HaplotypeScore=125.2327;InbreedingCoeff=0.7252;MQ=59.69;MQ0=11;MQRankSum=-7.141;QD=33.05;ReadPosRankSum=-7.043;VQSLOD=1.9181;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:5,13:22:15.52:401,16,0	1/1:4,7:12:9.03:234,9,0	0/0:15,0:10:25.11:0,25,389	0/0:11,0:6:11.78:0,12,232	0/0:22,0:22:48.02:0,48,981	1/1:20,2:22:36.01:1408,36,0	1/1:9,11:22:20.65:395,21,0	1/1:20,0:20:49.36:1101,49,0	0/0:15,0:15:28.91:0,29,690	0/1:8,12:24:27.14:1302,0,27	1/1:7,13:22:37.01:736,37,0	0/0:24,0:24:44.37:0,44,1078	0/0:18,0:18:40.89:0,41,951	0/1:4,6:11:1.86:157,0,2	1/1:7,16:25:4.05:321,4,0	1/1:5,1:16:15.45:258,15,0	1/1:1,9:13:9.03:227,9,0	1/1:5,6:12:6.02:163,6,0	1/1:13,1:14:15.49:798,15,0	1/1:5,16:25:51.01:1130,51,0	0/1:7,12:20:1.45:337,0,1	0/0:28,0:28:62.32:0,62,1472	0/0:17,0:17:44.78:0,45,1027	0/0:21,0:19:47.44:0,47,1036	0/0:16,0:16:18.39:0,18,484	1/1:3,16:22:45.36:1466,45,0	1/1:4,10:22:18.53:460,19,0	0/1:6,0:5:3.16:244,0,3
chr10	76755689	.	T	TC	16671.93	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=13.754;DP=653;FS=3.555;HRun=1;HaplotypeScore=106.8307;InbreedingCoeff=0.9994;MQ=77.26;MQ0=1;MQRankSum=-3.662;QD=39.41;ReadPosRankSum=1.262;VQSLOD=4.9147;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,48:49:99:1880,126,0	1/1:0,9:9:21.07:315,21,0	0/0:27,0:26:72.13:0,72,854	0/0:27,0:26:66.19:0,66,812	0/0:23,0:23:69.19:0,69,857	1/1:2,17:19:48.16:718,48,0	1/1:0,25:25:60.20:899,60,0	1/1:1,35:36:99:1511,105,0	0/0:15,0:15:42.09:0,42,501	1/1:1,28:29:81.24:1168,81,0	1/1:1,16:17:48.01:663,48,0	0/0:22,0:22:63.20:0,63,817	0/0:18,0:18:54.17:0,54,687	1/1:0,15:15:45.15:674,45,0	1/1:3,31:34:81.21:1185,81,0	1/1:0,19:19:54.18:809,54,0	1/1:1,32:33:78.26:1168,78,0	1/1:0,15:15:39.13:584,39,0	1/1:2,21:23:66.22:989,66,0	1/1:0,22:22:57.19:854,57,0	1/1:0,13:13:39.13:584,39,0	0/0:20,0:20:60.19:0,60,777	0/0:23,0:23:63.15:0,63,797	0/0:33,0:33:90.26:0,90,1137	0/0:22,0:22:63.20:0,63,818	1/1:0,25:25:75.24:1102,75,0	1/1:0,26:26:66.22:987,66,0	1/1:0,14:14:39.13:581,39,0
chr10	76757159	.	CG	C	14850.68	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=9.878;DP=634;FS=2.301;HRun=3;HaplotypeScore=69.3411;InbreedingCoeff=0.9910;MQ=81.35;MQ0=0;MQRankSum=-2.884;QD=33.75;ReadPosRankSum=3.521;VQSLOD=5.5453;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,46:46:99:1559,126,0	1/1:1,9:10:24.07:297,24,0	0/0:13,0:13:19.08:0,19,415	0/0:21,0:21:34.69:0,35,477	0/0:31,0:31:93.26:0,93,1295	1/1:0,13:13:30.09:371,30,0	1/1:0,28:28:69.22:854,69,0	1/1:0,27:27:81.23:976,81,0	0/0:19,0:19:51.17:0,51,728	1/1:2,27:29:81.17:981,81,0	1/1:2,17:19:10.02:553,10,0	0/0:20,0:20:57.15:0,57,796	0/0:16,0:16:45.14:0,45,616	1/1:0,27:27:69.22:854,69,0	1/1:2,24:26:69.22:854,69,0	1/1:0,24:24:72.23:891,72,0	1/1:1,34:35:99:1262,102,0	1/1:0,22:22:66.21:816,66,0	1/1:1,25:26:75.24:927,75,0	1/1:1,16:17:45.14:557,45,0	1/1:2,44:46:99:1485,120,0	0/0:19,0:19:54.17:0,54,760	0/0:17,0:17:51.13:0,51,709	0/0:20,0:20:57.14:0,57,793	0/0:18,0:18:54.18:0,54,776	1/1:1,17:18:51.15:615,51,0	1/1:0,20:20:60.19:740,60,0	1/1:0,7:7:21.07:259,21,0
chr10	76757316	.	TA	T	14226.12	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=12.131;DP=543;FS=13.005;HRun=1;HaplotypeScore=60.7003;InbreedingCoeff=0.9988;MQ=79.42;MQ0=0;MQRankSum=-3.114;QD=39.52;ReadPosRankSum=2.901;VQSLOD=4.4626;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:69.23:964,69,0	1/1:0,10:10:27.09:377,27,0	0/0:17,0:17:45.36:0,45,554	0/0:8,0:8:20.70:0,21,231	0/0:29,0:29:87.27:0,87,1313	1/1:0,18:18:51.17:713,51,0	1/1:0,12:12:30.10:419,30,0	1/1:0,23:23:69.22:948,69,0	0/0:14,0:14:42.09:0,42,608	1/1:0,35:35:99:1417,105,0	1/1:0,21:21:60.10:794,60,0	0/0:9,0:9:24.06:0,24,351	0/0:22,0:22:66.21:0,66,1009	1/1:0,18:18:54.18:754,54,0	1/1:0,16:16:45.15:629,45,0	1/1:0,19:19:51:713,51,0	1/1:0,24:24:63.21:881,63,0	1/1:0,15:15:45.15:629,45,0	1/1:0,17:17:51.15:694,51,0	1/1:0,22:22:63.14:839,63,0	1/1:0,16:16:48.16:671,48,0	0/0:18,0:18:54.17:0,54,824	0/0:22,0:22:66.21:0,66,1008	0/0:16,0:16:45.15:0,45,701	0/0:28,0:28:84.22:0,84,1240	1/1:0,28:28:84.26:1156,84,0	1/1:1,26:27:75.25:1039,75,0	1/1:0,14:14:42.14:587,42,0
chr10	76758519	.	TG	T	1586.23	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=13.244;DP=601;FS=0.373;HRun=10;HaplotypeScore=135.0468;InbreedingCoeff=0.8691;MQ=83.57;MQ0=1;MQRankSum=-3.540;QD=4.03;ReadPosRankSum=4.551;VQSLOD=0.5163;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:9.40:164,0,9	1/1:8,0:8:14.26:40,14,0	0/0:31,0:30:10.20:0,10,248	0/0:20,1:20:6.70:0,7,318	0/0:23,0:23:19.09:0,19,416	1/1:23,0:23:35.87:99,36,0	1/1:26,0:26:40.72:118,41,0	1/1:21,0:21:34.07:136,34,0	0/0:19,0:20:42.42:0,42,446	1/1:25,0:24:42.54:122,43,0	1/1:16,0:16:24.22:68,24,0	0/0:25,1:26:34.10:0,34,593	0/0:19,1:20:28.07:0,28,522	1/1:22,0:22:26.48:75,26,0	1/1:26,0:26:40.73:116,41,0	1/1:26,0:26:42.77:123,43,0	1/1:33,0:32:47.30:136,47,0	1/1:25,0:24:38.93:133,39,0	1/1:16,0:16:22.10:80,22,0	1/1:18,0:18:21.92:60,22,0	1/1:20,0:20:25.30:79,25,0	0/0:15,1:16:6.98:0,7,278	0/0:14,0:14:36.08:0,36,385	0/0:12,1:13:6.99:0,7,292	0/0:22,1:23:31.08:0,31,560	1/1:25,0:25:33.39:95,33,0	1/1:26,0:26:43.47:134,43,0	1/1:5,0:5:8.15:22,8,0
chr10	76758528	.	GGT	G	11409.14	PASS	AB=0.970;AC=35;AF=0.625;AN=56;BaseQRankSum=12.137;DP=546;FS=0.340;HRun=0;HaplotypeScore=94.1184;InbreedingCoeff=0.9188;MQ=76.84;MQ0=1;MQRankSum=-4.336;QD=31.52;ReadPosRankSum=6.104;VQSLOD=6.7992;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,1:32:28.13:68,0,28	1/1:0,8:8:21.07:299,21,0	0/0:18,0:17:47.47:0,47,602	0/0:19,0:18:44.14:0,44,625	0/0:20,0:20:56.71:0,57,863	1/1:1,20:21:54.18:761,54,0	1/1:1,26:27:60.20:854,60,0	1/1:0,23:23:69.02:796,69,0	0/0:14,0:14:42.14:0,42,762	1/1:1,26:26:78.08:1005,78,0	1/1:2,15:17:36.12:494,36,0	0/0:25,0:25:75.06:0,75,1210	0/0:22,0:22:66.02:0,66,1015	1/1:0,17:17:39.13:554,39,0	1/1:0,25:25:60.20:853,60,0	1/1:0,23:23:63.21:896,63,0	1/1:0,27:27:69.23:982,69,0	1/1:2,22:23:54.24:710,54,0	1/1:1,10:11:30.09:421,30,0	1/1:1,11:12:36.03:472,36,0	1/1:1,18:19:36.01:486,36,0	0/0:17,0:17:50.87:0,51,690	0/0:15,0:15:45.13:0,45,758	0/0:13,0:13:38.96:0,39,616	0/0:21,0:21:60.07:0,60,1031	1/1:1,17:18:54.14:739,54,0	1/1:2,24:26:63.13:851,63,0	1/1:0,5:5:12.04:170,12,0
chr10	76758529	.	GT	G	5268.37	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=14.054;DP=548;FS=0.350;HRun=3;HaplotypeScore=106.0111;InbreedingCoeff=0.9941;MQ=76.82;MQ0=1;MQRankSum=-0.198;QD=14.68;ReadPosRankSum=5.698;VQSLOD=4.0359;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:31:51.07:607,51,0	1/1:8,0:8:20.45:117,20,0	0/0:18,0:17:36.29:0,36,462	0/0:19,0:18:38.22:0,38,405	0/0:21,0:21:51.22:0,51,565	1/1:20,0:21:52.36:293,52,0	1/1:26,0:26:58.40:333,58,0	1/1:23,0:23:64.49:410,64,0	0/0:16,0:16:45.11:0,45,569	1/1:26,0:26:76.12:458,76,0	1/1:15,0:16:34.23:183,34,0	0/0:25,0:25:60.60:0,61,796	0/0:22,0:22:58.94:0,59,705	1/1:17,0:17:37.89:215,38,0	1/1:25,0:25:58.37:332,58,0	1/1:23,0:23:61.30:350,61,0	1/1:27,0:27:67.20:383,67,0	1/1:22,2:23:55.73:360,56,0	1/1:11,0:11:28.98:160,29,0	1/1:11,0:12:33.89:186,34,0	1/1:18,1:19:32.16:184,32,0	0/0:18,0:18:47.91:0,48,505	0/0:16,0:16:45.11:0,45,557	0/0:13,0:13:36.54:0,37,430	0/0:21,0:21:48.41:0,48,691	1/1:17,0:18:52.58:303,53,0	1/1:25,0:26:58.38:331,58,0	1/1:5,0:5:11.65:66,12,0
chr10	76758742	.	GCACGCA	G	461.61	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=5.630;DP=565;FS=12.388;HRun=0;HaplotypeScore=210.0866;InbreedingCoeff=0.3650;MQ=52.48;MQ0=12;MQRankSum=0.904;QD=5.56;ReadPosRankSum=0.083;VQSLOD=1.5776;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:40,4:45:24.89:472,25,0	0/0:13,1:14:29.46:0,29,509	0/0:23,0:5:6.02:0,6,90	0/0:29,0:6:8.99:0,9,227	0/0:22,0:22:17.64:0,18,200	0/0:16,0:15:32.66:0,33,448	0/0:31,0:31:28.51:0,29,479	0/1:24,0:24:60.36:60,0,532	0/0:18,0:18:47.91:0,48,1196	0/0:14,0:14:35.96:0,36,597	0/0:8,0:7:10.85:0,11,167	0/0:18,0:17:44.98:0,45,1218	0/0:18,0:18:44.84:0,45,1030	0/0:20,0:20:19.78:0,20,332	0/0:24,0:24:23.91:0,24,388	0/1:14,0:14:43.77:44,0,205	0/0:28,0:28:54.76:0,55,1039	0/0:15,0:15:15.13:0,15,451	0/0:9,0:9:16.08:0,16,176	0/0:13,0:13:13.60:0,14,253	0/0:50,0:50:81.06:0,81,1258	0/0:14,0:14:33.03:0,33,823	0/0:14,0:14:35.86:0,36,831	0/0:29,0:29:81.13:0,81,2217	0/0:20,0:20:11.84:0,12,118	0/0:14,0:14:37.07:0,37,533	0/0:15,1:16:13.23:0,13,393	0/0:5,0:5:8.06:0,8,120
chr10	76758744	.	ACG	A	150.49	PASS	AB=0.985;AC=6;AF=0.107;AN=56;BaseQRankSum=5.276;DP=568;FS=11.969;HRun=0;HaplotypeScore=181.6541;InbreedingCoeff=0.2179;MQ=51.23;MQ0=14;MQRankSum=1.284;QD=1.15;ReadPosRankSum=0.186;VQSLOD=1.9380;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:45,0:45:29.03:212,29,0	0/0:12,1:13:29.46:0,29,369	0/0:24,0:4:6.02:0,6,77	0/0:29,0:6:8.99:0,9,131	0/0:23,0:23:16.18:0,16,107	0/1:15,1:15:9.41:9,0,283	0/1:30,0:30:2.18:2,0,335	0/1:26,0:26:31.34:31,0,452	0/0:18,0:18:47.66:0,48,660	0/0:14,0:14:35.94:0,36,447	0/0:9,0:8:10.85:0,11,129	0/0:18,0:17:44.98:0,45,709	0/0:18,0:18:31.96:0,32,569	0/0:20,0:20:8.79:0,9,243	0/0:23,1:24:20.43:0,20,265	0/1:14,0:14:16.01:16,0,149	0/0:28,0:28:54.45:0,54,784	0/0:14,0:14:11.72:0,12,336	0/0:10,0:10:10.56:0,11,141	0/0:14,0:14:16.60:0,17,221	0/0:49,1:50:37.44:0,37,876	0/0:14,0:14:21.09:0,21,458	0/0:14,0:14:19.04:0,19,471	0/0:27,0:27:81.06:0,81,1261	0/0:21,0:21:11.35:0,11,97	0/0:14,0:14:37.01:0,37,404	0/0:16,0:16:12.42:0,12,302	0/0:5,0:5:8.06:0,8,94
chr10	76758746	.	GCA	G	643.22	PASS	AB=0.917;AC=8;AF=0.143;AN=56;BaseQRankSum=3.958;DP=578;FS=8.804;HRun=0;HaplotypeScore=183.2897;InbreedingCoeff=0.1514;MQ=51.01;MQ0=14;MQRankSum=-0.973;QD=4.29;ReadPosRankSum=0.806;VQSLOD=2.3632;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,30:45:51.16:623,51,0	0/0:12,0:12:27.09:0,27,420	0/0:24,0:4:3.01:0,3,48	0/0:29,0:6:6.02:0,6,97	0/0:20,0:21:0.25:0,0,1	0/0:17,0:16:10.19:0,10,330	0/0:32,0:32:20.20:0,20,406	0/1:24,3:27:64.09:64,0,467	0/0:19,0:19:33.07:0,33,481	0/0:16,0:16:39.13:0,39,564	0/0:10,0:9:14.99:0,15,184	0/0:19,0:18:36.11:0,36,547	0/1:17,1:18:0.59:1,0,441	0/0:19,2:21:16.02:0,16,312	0/0:24,0:24:26.55:0,27,349	0/1:11,2:13:54.01:54,0,170	0/0:27,1:28:54.16:0,54,828	0/0:15,0:15:26.45:0,26,379	0/0:12,0:11:11.99:0,12,166	0/0:14,1:15:15.05:0,15,233	0/0:50,2:52:54.97:0,55,1033	0/1:10,2:12:12.58:13,0,316	0/1:12,1:13:12.72:13,0,311	0/0:27,0:27:60.20:0,60,948	0/1:21,0:22:3.88:4,0,16	0/0:14,0:14:30.10:0,30,441	0/0:16,0:16:21.54:0,22,327	0/0:5,0:5:6.02:0,6,95
chr10	76758764	.	ATG	A	48.49	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=0.370;DP=579;FS=1.276;HRun=0;HaplotypeScore=181.8979;InbreedingCoeff=0.5217;MQ=47.25;MQ0=19;MQRankSum=0.521;QD=0.82;ReadPosRankSum=-1.502;VQSLOD=2.5218;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,1:45:43.15:0,43,201	0/0:11,0:11:30.04:0,30,496	0/0:14,0:2:6.02:0,6,73	0/0:21,1:3:6.02:0,6,119	1/1:12,10:22:6.02:91,6,0	0/0:17,2:18:25.11:0,25,584	0/0:33,0:32:51.78:0,52,917	0/0:26,0:25:60.37:0,60,1037	0/0:18,0:18:47.64:0,48,763	0/0:20,0:19:57.20:0,57,1084	0/0:8,0:8:15.05:0,15,301	0/0:20,1:20:44.52:0,45,761	0/0:14,0:14:38.92:0,39,717	0/0:21,1:22:26.38:0,26,454	0/0:24,2:26:26.25:0,26,566	0/1:14,0:14:9.97:10,0,419	0/0:29,0:29:63.63:0,64,1103	0/0:17,0:17:42.14:0,42,748	0/0:14,0:12:36.10:0,36,554	0/0:18,0:18:21.05:0,21,367	0/0:54,0:52:81.03:0,81,1497	0/0:12,0:12:26.65:0,27,404	0/0:9,0:9:20.81:0,21,378	0/0:27,0:26:60.56:0,61,1351	1/1:9,14:22:5.99:55,6,0	0/0:15,0:14:38.69:0,39,659	0/0:17,1:18:0.90:0,1,519	0/0:5,0:5:6.02:0,6,122
chr10	76758780	.	GCACA	G	2036.15	PASS	AB=0.795;AC=27;AF=0.540;AN=50;BaseQRankSum=3.916;DP=521;FS=1.473;HRun=0;HaplotypeScore=159.1275;InbreedingCoeff=0.3055;MQ=46.82;MQ0=18;MQRankSum=-1.872;QD=5.37;ReadPosRankSum=-2.697;VQSLOD=2.4582;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:43:12.48:25,0,12	1/1:5,2:7:6.02:94,6,0	./.	./.	1/1:12,1:24:1.25:3,1,0	0/1:11,4:16:23.06:131,0,23	1/1:19,11:28:15.04:236,15,0	0/1:24,0:20:9.04:13,0,9	0/0:17,0:17:30.10:0,30,655	0/0:15,0:14:17.99:0,18,293	0/0:6,0:9:8.77:0,9,136	0/0:9,0:17:19.46:0,19,98	0/1:11,0:13:27.48:27,0,261	0/1:10,9:23:56.20:173,0,56	0/1:13,11:25:24.56:217,0,25	0/0:11,0:13:26.56:0,27,515	1/1:16,10:27:6.56:207,7,0	1/1:10,5:16:18.05:244,18,0	1/1:8,2:10:11.19:99,11,0	0/1:12,5:17:12.41:129,0,12	1/1:36,10:44:15.98:229,16,0	0/0:9,0:9:6.02:0,6,117	0/0:7,0:7:3.01:0,3,46	0/0:25,0:25:56.60:0,57,1093	1/1:10,4:23:2.98:47,3,0	1/1:10,0:14:15.02:139,15,0	1/1:10,6:17:15.04:196,15,0	./.
chr10	76764081	.	C	CTTGAGCTATAAACTGCAGTGAT	84883.50	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=1.995;DP=665;FS=2.326;HRun=0;HaplotypeScore=331.2154;InbreedingCoeff=0.9964;MQ=62.66;MQ0=0;MQRankSum=-17.913;QD=186.56;ReadPosRankSum=2.187;VQSLOD=4.4638;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,7:49:99:7883,105,0	1/1:6,5:13:21.07:2173,21,0	0/0:14,0:14:25.65:0,26,835	0/0:18,0:17:24.29:0,24,711	0/0:22,0:22:63.19:0,63,3127	1/1:16,10:27:60.21:5186,60,0	1/1:23,4:28:63.14:4488,63,0	1/1:33,0:33:87.29:4889,87,0	0/0:14,0:14:39.12:0,39,2094	1/1:21,4:26:69.24:5398,69,0	1/1:9,6:17:33.11:3003,33,0	0/0:16,0:16:42.14:0,42,2264	0/0:21,0:21:63.22:0,63,3328	1/1:18,6:26:57.20:5167,57,0	1/1:24,9:35:93.28:7657,93,0	1/1:19,10:30:81.24:6840,81,0	1/1:15,3:20:45.15:3737,45,0	1/1:11,1:13:33.11:3235,33,0	1/1:20,2:22:51.17:3744,51,0	1/1:22,6:28:69.19:5327,69,0	1/1:12,1:16:15.05:976,15,0	0/0:25,0:25:63.18:0,63,3041	0/0:29,0:29:81.23:0,81,4503	0/0:18,0:18:48.16:0,48,2514	0/0:31,0:31:87.30:0,87,4508	1/1:21,6:31:87.30:7029,87,0	1/1:18,8:28:69.17:5354,69,0	1/1:6,5:12:30.10:2800,30,0
chr10	76764496	.	AAAG	A	2262.58	PASS	AB=0.989;AC=31;AF=0.596;AN=52;BaseQRankSum=7.301;DP=359;FS=15.994;HRun=0;HaplotypeScore=86.9604;InbreedingCoeff=0.1604;MQ=38.10;MQ0=14;MQRankSum=-0.922;QD=8.11;ReadPosRankSum=0.985;VQSLOD=1.4909;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:7.29:264,7,0	1/1:3,0:3:0.29:36,0,0	./.	0/0:4,0:1:0:0,0,0	0/0:17,0:17:10.66:0,11,297	1/1:13,0:12:29.52:200,30,0	1/1:13,1:14:29.01:226,29,0	0/1:25,1:24:26:240,0,26	0/1:17,0:16:7.80:8,0,383	1/1:14,1:14:4.19:155,4,0	0/1:10,0:8:3.07:80,0,3	0/0:11,0:11:18.07:0,18,325	0/1:8,0:8:14.86:15,0,202	1/1:14,0:14:35.88:243,36,0	1/1:9,1:10:7.48:139,7,0	1/1:12,0:11:2.73:104,3,0	0/1:15,1:15:15.31:98,0,15	0/1:11,0:8:8.47:35,0,8	0/1:8,0:8:48.98:49,0,67	1/1:14,0:14:25.66:169,26,0	0/0:6,0:5:2.92:0,3,17	0/1:15,0:15:9.99:10,0,212	0/0:20,0:19:33.80:0,34,517	0/0:15,0:15:18.48:0,18,299	0/1:15,0:14:14.42:14,0,149	1/1:14,0:12:33.60:196,34,0	1/1:13,0:13:11.20:147,11,0	./.
chr10	76764718	.	G	GTTTT	11735.38	PASS	AB=0.833;AC=36;AF=0.643;AN=56;BaseQRankSum=-1.687;DP=478;FS=10.657;HRun=11;HaplotypeScore=88.0002;InbreedingCoeff=0.8259;MQ=59.15;MQ0=2;MQRankSum=-5.283;QD=35.14;ReadPosRankSum=-3.417;VQSLOD=2.1490;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,10:20:33.03:688,33,0	1/1:0,1:2:6.02:108,6,0	0/0:13,0:9:16.16:0,16,190	0/1:19,0:16:30.83:31,0,267	0/0:21,0:23:64.23:0,64,841	1/1:5,12:22:36.12:736,36,0	1/1:9,6:20:39.09:718,39,0	1/1:11,8:24:39.11:716,39,0	0/0:21,0:22:60.12:0,60,795	1/1:9,9:19:42.14:855,42,0	1/1:8,14:29:63:1097,63,0	0/0:14,0:14:33.04:0,33,450	0/0:10,0:10:21.04:0,21,285	1/1:2,9:13:28.91:577,29,0	1/1:9,9:19:39.04:836,39,0	1/1:1,8:12:33.11:706,33,0	1/1:6,15:28:63.21:1350,63,0	1/1:7,7:15:12.04:261,12,0	0/1:10,3:19:7.80:447,0,8	1/1:6,8:18:39.10:722,39,0	1/1:4,3:8:12.04:276,12,0	0/0:11,0:12:30.02:0,30,392	0/0:20,0:20:45.08:0,45,597	0/0:21,0:22:57.07:0,57,760	0/0:8,0:8:24.07:0,24,312	1/1:4,10:13:27.09:604,27,0	1/1:6,7:16:36.09:695,36,0	1/1:5,5:11:15.05:314,15,0
chr10	76765662	.	AGTGTGTGT	A	1859.35	PASS	AB=0.930;AC=30;AF=0.556;AN=54;BaseQRankSum=2.868;DP=424;FS=6.965;HRun=0;HaplotypeScore=103.7799;InbreedingCoeff=0.3222;MQ=69.68;MQ0=13;MQRankSum=-2.599;QD=6.89;ReadPosRankSum=2.574;VQSLOD=1.4414;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:19:5.91:62,6,0	1/1:6,1:7:9:133,9,0	0/0:24,0:14:0:0,0,0	./.	0/0:7,0:12:8.98:0,9,73	1/1:10,0:13:6.02:100,6,0	1/1:15,0:15:8.76:103,9,0	0/1:18,1:17:47.89:48,0,68	0/1:16,1:17:62.72:63,0,135	0/1:11,0:11:4.90:41,0,5	1/1:6,0:8:3.01:50,3,0	0/0:24,0:25:30.39:0,30,715	0/0:9,0:9:18.06:0,18,516	1/1:6,8:15:11.93:211,12,0	1/1:15,3:18:15.05:343,15,0	1/1:10,4:14:3.01:75,3,0	0/1:16,0:16:29.79:69,0,30	0/1:11,7:18:21.39:177,0,21	0/0:11,0:10:4.26:0,4,98	1/1:5,4:8:3.01:75,3,0	0/1:27,1:29:64.75:74,0,65	0/0:13,0:13:18.05:0,18,558	0/0:8,0:8:9.03:0,9,244	0/0:11,0:14:21.07:0,21,654	0/0:10,0:13:12:0,12,118	1/1:10,2:12:6.02:114,6,0	1/1:9,4:13:2.49:74,2,0	1/1:10,3:10:9.03:225,9,0
chr10	76766467	.	G	GTTTAGAGACTACTAATCTAAGAAG	29544.89	PASS	AB=0.917;AC=51;AF=0.944;AN=54;BaseQRankSum=-2.261;DP=214;FS=17.067;HRun=0;HaplotypeScore=223.3158;InbreedingCoeff=-0.0815;MQ=89.11;MQ0=0;MQRankSum=-2.196;QD=138.71;ReadPosRankSum=2.039;VQSLOD=3.3548;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:27.09:2358,27,0	./.	0/1:10,1:12:33.27:1291,0,33	0/1:8,0:4:23.22:755,0,23	1/1:13,0:13:33.07:1969,33,0	1/1:10,0:10:26.84:1257,27,0	1/1:5,0:5:12.04:716,12,0	1/1:14,0:14:30.10:1821,30,0	1/1:10,0:10:23.67:1774,24,0	0/1:3,0:3:7.11:359,0,7	1/1:3,0:2:6.02:230,6,0	1/1:8,0:8:20.56:980,21,0	1/1:14,0:14:35.50:1999,35,0	1/1:8,0:8:20.86:1073,21,0	1/1:10,0:10:30.10:1259,30,0	1/1:9,0:9:27.07:1654,27,0	1/1:6,0:6:12.01:500,12,0	1/1:8,0:8:21.05:1543,21,0	1/1:5,0:5:15.05:762,15,0	1/1:3,0:3:9.03:621,9,0	1/1:7,0:7:15.05:948,15,0	1/1:10,0:10:12.55:1100,13,0	1/1:3,0:3:6.02:552,6,0	1/1:12,0:12:21.05:1104,21,0	1/1:11,0:11:21.03:1801,21,0	1/1:3,0:3:9.03:807,9,0	1/1:4,0:4:8.92:293,9,0	1/1:1,0:1:2.98:21,3,0
chr10	76766726	.	C	CCTCCTT	11635.13	PASS	AC=28;AF=0.560;AN=50;BaseQRankSum=-1.458;DP=446;FS=12.055;HRun=0;HaplotypeScore=98.1612;InbreedingCoeff=0.9258;MQ=54.50;MQ0=3;MQRankSum=-8.458;QD=53.13;ReadPosRankSum=-2.587;VQSLOD=3.8700;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:45.13:0,45,889	./.	0/0:24,0:16:17:0,17,264	0/0:29,0:17:27.03:0,27,397	0/0:23,0:23:45.15:0,45,973	1/1:9,7:16:42.05:1105,42,0	1/1:4,17:22:36.08:1070,36,0	1/1:15,18:39:69.10:1131,69,0	0/0:15,0:15:36.12:0,36,803	1/1:4,7:11:18.05:538,18,0	./.	0/0:12,0:12:33.08:0,33,674	0/0:19,0:19:51.13:0,51,1010	1/1:8,8:16:38.93:990,39,0	1/1:7,13:20:57:1489,57,0	1/1:6,10:16:45:1288,45,0	1/1:4,12:15:3.91:428,4,0	1/1:1,2:3:3.01:103,3,0	1/1:11,2:13:36.03:617,36,0	./.	1/1:4,8:12:12.04:361,12,0	0/0:14,0:14:33.04:0,33,640	0/0:21,0:21:53.19:0,53,1097	0/0:19,0:19:51.99:0,52,990	0/0:15,0:15:36.08:0,36,754	1/1:7,9:16:42.14:1304,42,0	1/1:1,14:16:33.11:1127,33,0	1/1:2,0:2:6.02:85,6,0
chr10	76766734	.	T	TC	1096.82	PASS	AB=0.974;AC=20;AF=0.400;AN=50;BaseQRankSum=9.985;DP=399;FS=6.943;HRun=1;HaplotypeScore=103.5966;InbreedingCoeff=0.2794;MQ=52.55;MQ0=3;MQRankSum=-9.981;QD=6.06;ReadPosRankSum=0.250;VQSLOD=0.2714;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:44.92:0,45,558	./.	0/0:26,0:17:35.78:0,36,453	0/0:29,0:15:35.78:0,36,424	0/0:22,0:22:58.39:0,58,720	0/1:14,1:15:77.68:165,0,78	0/1:17,0:17:48.36:52,0,48	0/1:26,1:27:33.43:33,0,542	0/0:13,0:13:39.13:0,39,506	0/1:8,0:8:24.54:25,0,60	./.	0/0:12,0:12:33.07:0,33,398	0/0:18,0:18:54.14:0,54,658	1/1:14,0:14:35.29:207,35,0	0/1:19,0:19:64.84:133,0,65	1/1:13,2:15:1.72:141,2,0	1/1:10,1:10:15.91:74,16,0	0/1:2,0:2:3.54:4,0,33	0/1:13,0:12:87.94:88,0,153	./.	1/1:9,0:9:7.49:27,7,0	0/0:13,0:13:36.10:0,36,452	0/0:19,0:19:57.16:0,57,722	0/0:21,0:21:57.17:0,57,726	0/0:16,0:16:39.08:0,39,486	0/1:14,2:16:36.15:153,0,36	1/1:13,0:13:30.51:128,31,0	1/1:2,0:2:5.96:43,6,0
chr10	76766750	.	AT	A	830.34	PASS	AC=4;AF=0.083;AN=48;BaseQRankSum=-0.261;DP=384;FS=0.726;HRun=5;HaplotypeScore=101.2233;InbreedingCoeff=0.8909;MQ=47.38;MQ0=11;MQRankSum=-0.581;QD=23.06;ReadPosRankSum=0.739;VQSLOD=2.1923;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:45.07:0,45,570	./.	0/0:42,0:19:37.49:0,37,469	0/0:46,0:19:32.61:0,33,403	1/1:4,18:21:51.08:577,51,0	0/0:8,0:8:24.08:0,24,325	0/0:16,0:16:30:0,30,378	0/0:28,0:27:68.99:0,69,908	0/0:12,0:12:33.11:0,33,450	0/0:6,0:6:18.06:0,18,243	./.	0/0:11,0:11:21.07:0,21,287	0/0:14,0:14:36.12:0,36,490	0/0:8,0:8:18.06:0,18,244	0/0:15,0:14:39.04:0,39,500	0/0:10,0:10:30.06:0,30,384	0/0:11,0:9:11.99:0,12,139	0/0:2,0:2:6.02:0,6,81	0/0:9,0:7:18.06:0,18,241	./.	0/0:7,0:7:9.03:0,9,122	0/0:12,0:12:30.09:0,30,394	0/0:23,0:23:57.19:0,57,769	0/0:21,0:21:54.12:0,54,700	1/1:1,13:14:33.09:372,33,0	0/0:10,0:10:24.06:0,24,308	0/0:11,0:11:26.83:0,27,309	./.
chr10	76766815	.	CCTT	C	2178.12	PASS	AB=0.600;AC=27;AF=0.540;AN=50;BaseQRankSum=3.209;DP=424;FS=15.305;HRun=0;HaplotypeScore=59.4365;InbreedingCoeff=0.7269;MQ=64.72;MQ0=78;MQRankSum=-3.201;QD=12.17;ReadPosRankSum=0.793;VQSLOD=1.2258;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:35.99:0,36,739	./.	0/0:42,0:21:44.64:0,45,970	0/0:41,0:19:21.04:0,21,342	0/0:17,0:17:40.10:0,40,652	1/1:3,7:9:6.02:98,6,0	1/1:3,11:11:9.03:160,9,0	1/1:4,16:20:36.58:592,37,0	0/0:10,0:10:30.07:0,30,608	1/1:2,12:13:21:288,21,0	1/1:5,7:7:3.01:55,3,0	0/0:15,0:19:38.73:0,39,592	0/0:14,0:14:25.89:0,26,645	1/1:1,5:6:6.02:108,6,0	./.	0/1:2,6:8:46.49:46,0,61	1/1:7,2:3:3.01:51,3,0	1/1:2,4:5:9.50:160,10,0	1/1:8,0:1:3.01:55,3,0	1/1:10,0:3:9.03:163,9,0	./.	0/0:14,0:14:35.96:0,36,593	0/0:12,0:11:29.33:0,29,459	0/0:16,0:16:36.07:0,36,693	0/0:14,0:14:42.10:0,42,777	1/1:6,14:15:30.09:484,30,0	1/1:1,16:17:3.01:53,3,0	1/1:7,0:1:3.01:55,3,0
chr10	76767492	.	C	CT	242.62	PASS	AC=10;AF=0.294;AN=34;BaseQRankSum=5.019;DP=460;FS=15.362;HRun=0;HaplotypeScore=46.1529;InbreedingCoeff=0.8109;MQ=55.45;MQ0=21;MQRankSum=-3.655;QD=3.91;ReadPosRankSum=-3.163;VQSLOD=1.0640;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,169,2347	./.	0/0:23,0:22:66.20:0,66,874	0/0:27,0:24:69.16:0,69,881	0/0:29,0:29:72.24:0,72,981	./.	./.	1/1:6,1:3:5.97:63,6,0	0/0:27,0:26:75.25:0,75,1042	1/1:2,16:3:6.02:81,6,0	./.	0/0:29,0:29:84.27:0,84,1150	0/0:22,0:22:60.20:0,60,832	./.	./.	0/0:3,16:2:0:0,0,0	./.	./.	1/1:1,8:7:11.83:123,12,0	./.	./.	0/0:22,0:22:54.18:0,54,751	0/0:15,0:15:45.15:0,45,618	0/0:40,0:40:99:0,120,1677	0/0:14,0:13:42.09:0,42,563	1/1:1,6:2:5.97:63,6,0	1/1:0,20:5:3.01:41,3,0	./.
chr10	76767828	.	A	ACTT	2190.24	PASS	AB=0.955;AC=33;AF=0.589;AN=56;BaseQRankSum=-2.626;DP=439;FS=2.594;HRun=0;HaplotypeScore=80.1886;InbreedingCoeff=0.8051;MQ=64.77;MQ0=14;MQRankSum=-0.574;QD=8.30;ReadPosRankSum=-0.250;VQSLOD=2.4210;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:43.05:0,43,417	1/1:8,0:7:6.48:58,6,0	0/0:26,0:15:28.94:0,29,287	0/0:17,0:10:7.81:0,8,138	0/0:15,0:14:29.04:0,29,343	1/1:10,0:10:13.16:106,13,0	1/1:24,1:23:18.04:149,18,0	1/1:19,0:19:36.31:302,36,0	0/0:11,0:11:32.97:0,33,341	1/1:20,0:18:26.69:217,27,0	1/1:10,1:9:17.18:216,17,0	0/0:14,0:14:32.92:0,33,331	0/0:18,0:18:41.91:0,42,399	1/1:15,0:15:5.75:48,6,0	1/1:12,0:11:5.87:46,6,0	1/1:14,0:14:11.72:91,12,0	1/1:26,1:26:0.94:188,1,0	0/1:20,1:21:5.35:166,0,5	1/1:20,0:17:24.29:268,24,0	1/1:14,0:12:13.72:84,14,0	1/1:13,0:12:13.52:119,14,0	0/0:16,0:14:36:0,36,376	0/0:8,0:8:18:0,18,181	0/0:16,0:16:35.85:0,36,352	0/0:15,0:13:26.82:0,27,269	1/1:10,0:8:18.02:201,18,0	1/1:19,0:18:8.77:119,9,0	1/1:6,0:2:2.98:23,3,0
chr10	76767830	.	T	TTC	2716.16	PASS	AB=0.720;AC=29;AF=0.518;AN=56;BaseQRankSum=-2.273;DP=552;FS=12.644;HRun=0;HaplotypeScore=129.6664;InbreedingCoeff=0.5569;MQ=58.40;MQ0=24;MQRankSum=-1.117;QD=7.94;ReadPosRankSum=0.669;VQSLOD=2.9368;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:41.82:0,42,373	1/1:3,8:9:12.03:143,12,0	0/0:25,0:14:29.04:0,29,284	0/0:17,0:10:6.75:0,7,131	0/0:17,0:14:29.88:0,30,311	1/1:12,3:15:2.32:151,2,0	1/1:30,3:31:22.11:202,22,0	1/1:15,11:26:24.08:311,24,0	0/0:13,0:13:32.64:0,33,310	1/1:25,0:21:12.03:205,12,0	1/1:9,2:10:24.73:257,25,0	0/0:19,0:18:35.14:0,35,323	0/0:21,0:21:41.49:0,41,380	0/1:12,11:23:5.95:82,0,6	0/1:15,5:19:17.25:101,0,17	1/1:6,10:15:11.53:139,12,0	0/1:24,12:33:10.92:227,0,11	0/1:17,14:29:25.45:226,0,25	1/1:15,11:22:29.82:331,30,0	1/1:4,11:13:19.51:115,20,0	1/1:12,0:10:16.05:125,16,0	0/0:20,0:16:38.88:0,39,367	0/0:10,0:10:8.60:0,9,156	0/0:25,0:24:35.29:0,35,323	0/0:17,0:15:24.08:0,24,226	1/1:12,0:11:3.98:165,4,0	0/1:13,10:23:15.86:117,0,16	1/1:6,0:2:2.99:23,3,0
chr10	76767831	.	T	TC	1899.48	PASS	AB=0.945;AC=24;AF=0.429;AN=56;BaseQRankSum=-2.591;DP=558;FS=49.783;HRun=0;HaplotypeScore=120.7775;InbreedingCoeff=0.1962;MQ=57.12;MQ0=27;MQRankSum=1.909;QD=5.59;ReadPosRankSum=4.995;VQSLOD=1.5513;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:47.33:0,47,381	1/1:9,0:7:10.96:62,11,0	0/0:24,0:13:28.91:0,29,279	0/0:17,0:10:7.83:0,8,129	0/0:19,0:16:37.40:0,37,322	0/1:13,4:17:38.24:118,0,38	1/1:14,19:31:5.73:142,6,0	0/1:24,0:24:18.85:200,0,19	0/0:13,0:13:35.85:0,36,315	1/1:13,12:21:6.38:212,6,0	1/1:13,0:12:27.77:193,28,0	0/0:20,0:19:44.69:0,45,370	0/0:22,0:22:44.08:0,44,372	0/1:20,1:21:27.53:50,0,28	0/1:18,0:17:37.17:37,0,69	0/1:15,1:15:15.67:75,0,16	0/1:35,4:35:66.59:182,0,67	0/1:30,3:30:57:169,0,57	0/1:23,1:20:22.24:221,0,22	1/1:12,1:11:18.70:118,19,0	1/1:10,1:9:17.09:132,17,0	0/0:19,0:15:38.31:0,38,337	0/0:11,0:10:23.14:0,23,183	0/0:26,0:25:37.84:0,38,312	0/0:17,0:15:29.27:0,29,249	0/1:12,0:11:43.49:104,0,43	0/1:23,0:23:50.82:51,0,91	1/1:7,0:3:2.99:23,3,0
chr10	76769092	.	CAG	C	14955.35	PASS	AB=0.514;AC=33;AF=0.589;AN=56;BaseQRankSum=12.303;DP=658;FS=5.103;HRun=0;HaplotypeScore=78.9153;InbreedingCoeff=0.9244;MQ=59.70;MQ0=4;MQRankSum=1.826;QD=38.15;ReadPosRankSum=2.645;VQSLOD=7.1808;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1810	1/1:2,6:8:18.06:265,18,0	0/0:25,0:17:45.15:0,45,803	0/0:33,0:26:71.25:0,71,1207	0/0:25,0:25:72.25:0,72,1339	1/1:0,25:25:69.23:1016,69,0	0/1:1,17:18:6.27:614,0,6	1/1:2,31:33:93.31:1370,93,0	0/0:23,0:23:66.23:0,66,1228	1/1:0,24:24:72.24:1044,72,0	1/1:3,12:15:30.10:441,30,0	0/0:15,0:15:45.15:0,45,842	0/0:22,0:22:66.23:0,66,1228	1/1:1,33:34:84.28:1236,84,0	1/1:1,41:41:96.32:1413,96,0	1/1:0,18:18:48.16:707,48,0	1/1:0,32:32:96.32:1413,96,0	1/1:1,20:20:45.15:662,45,0	1/1:2,23:25:63.21:908,63,0	1/1:0,24:24:69.23:1015,69,0	1/1:0,20:20:51.17:751,51,0	0/0:25,0:25:63.20:0,63,1148	0/0:22,0:22:63.20:0,63,1148	0/0:22,0:22:60.21:0,60,1115	0/0:21,0:21:60.19:0,60,1084	1/1:0,25:25:72.24:1060,72,0	1/1:2,22:24:66.21:953,66,0	1/1:0,4:4:6.02:88,6,0
chr10	76769574	.	CGAACGGCTTTAACACTGAGCACCAGAACTTCCAGCACAA	C	22034.44	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=12.811;DP=541;FS=0.981;HRun=0;HaplotypeScore=486.4973;InbreedingCoeff=0.8754;MQ=78.64;MQ0=0;MQRankSum=-11.241;QD=87.44;ReadPosRankSum=4.762;VQSLOD=1.9176;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,18363	1/1:8,3:11:6.02:606,6,0	0/0:16,0:16:48.16:0,48,2985	0/0:16,0:16:44.94:0,45,2825	0/0:22,0:22:63.22:0,63,8848	1/1:7,11:18:21.07:2131,21,0	1/1:14,4:18:3.01:304,3,0	1/1:15,0:15:6.01:109,6,0	0/0:23,0:23:66.23:0,66,9790	1/1:10,11:20:33.06:1423,33,0	1/1:7,3:10:6.02:605,6,0	0/0:22,0:22:63.21:0,63,8933	0/0:24,0:24:72.23:0,72,7952	1/1:6,13:19:24.08:2435,24,0	1/1:6,11:17:21.07:2130,21,0	1/1:10,8:17:9.03:913,9,0	1/1:6,10:15:12.04:832,12,0	1/1:3,7:10:18.06:1684,18,0	1/1:5,5:10:15.05:1522,15,0	1/1:4,8:12:15.05:1509,15,0	1/1:16,0:14:4.26:50,4,0	0/0:26,0:26:72.25:0,72,9551	0/0:30,0:30:90.27:0,90,12967	0/0:27,0:27:78.27:0,78,11205	0/0:33,0:33:90.30:0,90,12574	1/1:7,12:19:36.12:3652,36,0	1/1:7,8:15:15.05:1522,15,0	1/1:5,2:7:6.02:609,6,0
chr10	76771565	.	AT	A	3560.88	PASS	AB=0.909;AC=35;AF=0.625;AN=56;BaseQRankSum=5.508;DP=298;FS=1.839;HRun=13;HaplotypeScore=32.9389;InbreedingCoeff=0.8085;MQ=76.68;MQ0=3;MQRankSum=0.379;QD=16.96;ReadPosRankSum=1.460;VQSLOD=4.3690;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:42.02:0,42,399	1/1:0,1:1:2.98:22,3,0	0/1:7,1:8:7.15:7,0,65	0/0:8,0:7:7.56:0,8,62	0/0:17,0:18:38.90:0,39,364	1/1:1,9:11:28.88:203,29,0	1/1:0,5:5:8.95:66,9,0	1/1:5,21:26:62.52:452,63,0	0/0:11,0:11:24.04:0,24,234	1/1:0,7:7:20.88:153,21,0	1/1:0,12:12:32.70:235,33,0	0/0:7,0:7:18.03:0,18,175	0/0:6,0:6:15.02:0,15,146	1/1:2,3:5:5.95:44,6,0	1/1:0,13:15:36.89:253,37,0	1/1:2,3:5:8.94:66,9,0	1/1:3,15:17:38.77:285,39,0	1/1:3,25:28:71.55:523,72,0	1/1:2,11:13:32.81:241,33,0	1/1:1,8:9:20.86:153,21,0	1/1:0,4:4:11.93:88,12,0	0/0:4,0:4:12.02:0,12,117	0/0:3,0:3:9.01:0,9,88	0/0:1,0:1:3:0,3,29	0/0:11,0:12:7.96:0,8,219	1/1:1,14:15:38.75:284,39,0	1/1:2,12:15:37.82:269,38,0	1/1:1,10:11:29.81:219,30,0
chr10	76772135	.	ATT	A	7014.02	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=10.217;DP=475;FS=1.186;HRun=11;HaplotypeScore=80.0006;InbreedingCoeff=0.8718;MQ=72.83;MQ0=5;MQRankSum=-7.482;QD=24.70;ReadPosRankSum=2.397;VQSLOD=4.9685;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.10:0,54,741	1/1:0,4:4:9.01:96,9,0	0/0:18,0:12:0.09:0,0,80	0/1:20,0:17:6.31:6,0,122	0/0:24,0:25:62.67:0,63,889	1/1:3,16:19:39.22:443,39,0	1/1:0,11:12:27.02:343,27,0	1/1:10,12:22:45.08:472,45,0	0/0:16,0:16:39.12:0,39,580	1/1:0,24:24:72.18:766,72,0	1/1:2,16:18:51.12:543,51,0	0/0:14,0:15:44.64:0,45,653	0/0:26,0:27:75.19:0,75,1010	1/1:2,13:15:14.60:358,15,0	1/1:2,12:13:39.08:406,39,0	1/1:0,11:11:33.08:351,33,0	1/1:3,22:25:68.88:714,69,0	1/1:3,15:18:48.07:500,48,0	1/1:7,7:15:35.78:336,36,0	1/1:3,13:16:42.05:432,42,0	1/1:0,2:2:6.02:64,6,0	0/0:14,0:14:42.14:0,42,628	0/0:13,0:13:33.07:0,33,444	0/0:16,0:17:48.06:0,48,601	0/0:23,0:24:68.71:0,69,1003	1/1:2,10:13:35.81:363,36,0	1/1:4,20:25:57.06:662,57,0	1/1:0,6:6:15.04:160,15,0
chr10	76772165	.	G	GA	6506.88	PASS	AB=0.778;AC=34;AF=0.607;AN=56;BaseQRankSum=3.028;DP=551;FS=1.162;HRun=9;HaplotypeScore=91.5482;InbreedingCoeff=0.8122;MQ=83.20;MQ0=5;MQRankSum=-9.133;QD=20.40;ReadPosRankSum=-0.777;VQSLOD=4.8430;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:56.99:0,57,495	0/1:2,4:6:11.01:116,0,11	0/1:42,2:27:30.42:30,0,120	0/0:47,0:31:5.81:0,6,216	0/0:34,0:34:86.97:0,87,754	1/1:3,16:19:16.06:405,16,0	1/1:4,7:11:21.06:232,21,0	1/1:9,19:29:13.61:539,14,0	0/0:12,0:12:35.98:0,36,309	1/1:8,16:24:37.09:626,37,0	1/1:5,20:25:11.02:563,11,0	0/0:18,0:18:47.98:0,48,417	0/0:25,0:25:68.98:0,69,599	1/1:3,15:18:22.07:471,22,0	1/1:2,14:16:39.11:431,39,0	1/1:1,9:10:24.06:264,24,0	1/1:3,19:22:45.12:497,45,0	1/1:7,10:18:33.09:363,33,0	1/1:6,7:13:21.06:232,21,0	1/1:2,15:17:42.07:451,42,0	1/1:1,2:3:6.02:66,6,0	0/0:14,0:14:29.98:0,30,260	0/0:21,0:21:59.98:0,60,517	0/0:19,0:18:21.99:0,22,360	0/0:21,0:21:56.98:0,57,495	1/1:2,11:13:33.09:365,33,0	1/1:4,19:23:31.90:599,32,0	1/1:5,3:8:24.05:256,24,0
chr10	76772784	.	AG	A	3201.44	PASS	AB=1.000;AC=52;AF=0.929;AN=56;BaseQRankSum=-4.367;DP=324;FS=7.743;HRun=1;HaplotypeScore=184.6056;InbreedingCoeff=0.1630;MQ=47.32;MQ0=1;MQRankSum=0.653;QD=10.00;ReadPosRankSum=1.592;VQSLOD=1.3296;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,10:17:24.22:271,24,0	1/1:8,0:8:0.70:49,1,0	1/1:2,0:2:4.96:23,5,0	0/0:3,1:3:5.35:0,5,23	1/1:15,9:24:33.57:337,34,0	1/1:13,0:13:1.67:48,2,0	0/1:8,0:8:0.75:38,0,1	1/1:23,0:23:17.90:191,18,0	1/1:7,6:13:25.03:209,25,0	1/1:15,0:15:20.80:169,21,0	1/1:11,0:11:11.26:107,11,0	1/1:4,5:9:18.86:168,19,0	1/1:2,2:4:5.99:62,6,0	1/1:4,0:4:0.47:2,0,0	1/1:12,0:12:3.81:55,4,0	1/1:10,0:10:1.62:30,2,0	1/1:14,0:13:27.79:168,28,0	0/1:9,0:9:11.75:49,0,12	1/1:9,0:9:7.37:38,7,0	1/1:20,0:20:18.59:147,19,0	1/1:2,0:2:2.97:20,3,0	1/1:10,7:17:29.46:259,29,0	1/1:12,3:15:17.71:186,18,0	1/1:6,0:5:2.76:20,3,0	1/1:6,11:17:36.03:354,36,0	1/1:13,0:13:17.22:106,17,0	1/1:24,0:24:25.64:171,26,0	1/1:1,0:1:3:26,3,0
chr10	76772814	.	CTG	C	729.92	PASS	AB=0.929;AC=36;AF=0.667;AN=54;BaseQRankSum=3.421;DP=217;FS=1.278;HRun=0;HaplotypeScore=266.0205;InbreedingCoeff=0.3695;MQ=37.87;MQ0=0;MQRankSum=0.075;QD=6.08;ReadPosRankSum=0.460;VQSLOD=3.0825;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:1.81:0,2,144	1/1:4,0:4:7.91:32,8,0	./.	0/0:1,0:1:0:0,0,0	0/1:19,1:20:3.13:3,0,203	1/1:4,0:4:10.78:46,11,0	1/1:3,0:3:5.64:21,6,0	1/1:7,0:7:7.12:28,7,0	0/0:16,0:16:3.01:0,3,132	1/1:10,1:11:29.56:140,30,0	1/1:10,0:10:26.06:149,26,0	0/1:12,1:13:67.42:67,0,96	0/1:7,0:7:20.63:21,0,32	1/1:3,0:3:8.09:46,8,0	1/1:5,0:5:10.44:45,10,0	1/1:4,0:4:7.92:35,8,0	1/1:4,0:4:10.29:41,10,0	0/1:4,1:5:2.51:20,0,3	1/1:4,0:4:9.36:34,9,0	1/1:4,0:4:3.31:23,3,0	1/1:1,0:1:1.82:5,2,0	0/0:15,0:15:17.02:0,17,129	0/0:13,0:13:4.72:0,5,124	0/0:9,0:9:1.17:0,1,4	0/0:19,0:20:5.66:0,6,140	1/1:4,0:4:9.34:35,9,0	1/1:5,1:6:9.88:80,10,0	1/1:1,0:1:2.60:10,3,0
chr10	76772817	.	CCT	C	1628.25	PASS	AB=0.667;AC=33;AF=0.611;AN=54;BaseQRankSum=5.634;DP=231;FS=17.018;HRun=0;HaplotypeScore=271.5262;InbreedingCoeff=0.7560;MQ=37.39;MQ0=0;MQRankSum=0.984;QD=19.62;ReadPosRankSum=3.042;VQSLOD=2.1075;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:47.71:0,48,430	1/1:0,4:4:9:85,9,0	./.	0/0:1,0:1:0:0,0,0	0/0:23,0:23:21.80:0,22,314	1/1:0,4:4:12.02:116,12,0	1/1:1,2:3:7.78:52,8,0	1/1:4,3:7:12.45:67,12,0	0/0:16,0:16:38.39:0,38,342	1/1:2,10:12:16.22:292,16,0	1/1:1,9:10:28.50:247,28,0	0/0:14,0:14:1.94:0,2,177	0/0:8,0:8:20.19:0,20,177	1/1:0,3:3:8.99:75,9,0	1/1:0,5:5:14.50:118,15,0	1/1:0,4:4:9.90:93,10,0	1/1:0,4:4:12.01:110,12,0	1/1:3,2:5:8.21:57,8,0	1/1:0,4:4:11.99:105,12,0	1/1:0,4:4:11.69:93,12,0	1/1:0,1:1:2.99:23,3,0	0/0:18,0:18:32.41:0,32,239	0/0:14,0:14:35.62:0,36,259	0/0:9,0:9:11.89:0,12,92	0/0:21,0:21:39.51:0,40,386	1/1:1,4:5:14.67:117,15,0	1/1:3,3:6:17.78:153,18,0	0/1:1,1:2:23.21:23,0,34
chr10	76772844	.	AC	A	9587.18	PASS	AB=0.714;AC=53;AF=0.946;AN=56;BaseQRankSum=-0.072;DP=401;FS=1.543;HRun=2;HaplotypeScore=290.1572;InbreedingCoeff=0.5253;MQ=50.58;MQ0=1;MQRankSum=-3.016;QD=24.21;ReadPosRankSum=3.318;VQSLOD=4.1479;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,19:25:60.02:578,60,0	1/1:1,7:8:24:212,24,0	0/1:3,1:5:28.35:28,0,64	0/0:5,0:5:8.30:0,8,63	1/1:0,19:19:53.98:487,54,0	1/1:2,14:15:42.02:394,42,0	1/1:2,7:9:26.96:227,27,0	1/1:3,23:26:71.82:682,72,0	1/1:0,17:17:50.89:439,51,0	1/1:3,16:19:46.98:436,47,0	1/1:2,17:20:56.14:463,56,0	1/1:0,15:15:44.92:399,45,0	1/1:0,9:9:26.99:245,27,0	1/1:0,13:13:38.96:334,39,0	1/1:1,15:16:44.71:364,45,0	1/1:0,7:7:20.60:170,21,0	1/1:4,11:13:23.99:219,24,0	1/1:3,7:10:12.19:196,12,0	1/1:1,11:12:31.14:290,31,0	1/1:2,11:13:38.51:341,39,0	1/1:0,10:10:29.54:263,30,0	1/1:0,15:15:45:415,45,0	1/1:2,13:15:38.97:335,39,0	1/1:2,10:12:20.99:192,21,0	1/1:1,20:21:60.01:552,60,0	1/1:1,26:27:80.91:743,81,0	1/1:0,20:20:59.59:527,60,0	1/1:0,2:2:6:54,6,0
chr10	76772847	.	AC	A	8936.98	PASS	AB=0.833;AC=53;AF=0.946;AN=56;BaseQRankSum=1.203;DP=389;FS=0.000;HRun=3;HaplotypeScore=274.1909;InbreedingCoeff=0.5386;MQ=51.63;MQ0=1;MQRankSum=-3.928;QD=23.27;ReadPosRankSum=3.314;VQSLOD=3.6316;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:59.16:450,59,0	1/1:1,7:8:23.99:212,24,0	0/1:4,1:5:19.50:19,0,53	0/0:5,0:5:8.24:0,8,76	1/1:1,19:20:56.71:445,57,0	1/1:2,14:15:44.92:376,45,0	1/1:0,9:9:25.24:223,25,0	1/1:0,24:24:72.02:653,72,0	1/1:2,16:18:53.72:430,54,0	1/1:1,16:17:50.92:443,51,0	1/1:2,17:19:47.55:417,48,0	1/1:1,15:16:47.51:394,48,0	1/1:0,9:9:26.89:213,27,0	1/1:0,13:13:38.91:311,39,0	1/1:1,15:16:47.52:362,48,0	1/1:0,7:7:20.48:158,20,0	1/1:2,11:11:23.87:186,24,0	1/1:2,7:9:21.48:193,21,0	1/1:0,11:11:32.75:275,33,0	1/1:0,12:12:35.93:305,36,0	1/1:1,9:10:29.85:247,30,0	1/1:1,15:16:47.84:379,48,0	1/1:0,13:13:38.91:312,39,0	1/1:1,9:10:20.89:161,21,0	1/1:2,19:21:62.84:518,63,0	1/1:1,26:27:80.81:712,81,0	1/1:0,20:20:59.86:494,60,0	1/1:0,2:2:6:51,6,0
chr10	76773947	.	AT	A	7083.93	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=12.590;DP=447;FS=2.189;HRun=8;HaplotypeScore=44.1806;InbreedingCoeff=0.9543;MQ=67.88;MQ0=1;MQRankSum=0.476;QD=26.14;ReadPosRankSum=1.191;VQSLOD=5.4385;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:69.15:0,69,793	1/1:1,5:6:15.02:145,15,0	0/0:8,0:5:10.85:0,11,89	0/0:7,0:5:1.78:0,2,6	0/0:27,0:27:75.21:0,75,884	1/1:4,12:16:36.05:348,36,0	1/1:0,7:7:9.01:87,9,0	1/1:2,22:24:66.10:637,66,0	0/0:22,0:22:66.19:0,66,785	1/1:1,13:14:39.04:370,39,0	1/1:0,13:13:39.06:376,39,0	0/0:17,0:17:51.16:0,51,616	0/0:19,0:19:51.16:0,51,616	1/1:0,15:15:45.07:435,45,0	1/1:3,10:13:30.05:290,30,0	1/1:0,18:18:54.09:522,54,0	1/1:0,24:24:72.11:695,72,0	1/1:4,16:20:48.07:464,48,0	1/1:1,13:14:39.05:371,39,0	1/1:4,12:16:39.06:377,39,0	1/1:0,7:7:21.03:203,21,0	0/0:9,0:9:26.29:0,26,295	0/0:15,0:15:42.13:0,42,503	0/0:6,0:6:15.05:0,15,181	0/0:20,0:20:60.18:0,60,725	1/1:2,26:28:78.12:753,78,0	1/1:1,21:22:66.11:637,66,0	1/1:0,14:14:39.06:377,39,0
chr10	76774042	.	TTA	T	13061.33	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=13.702;DP=520;FS=3.994;HRun=0;HaplotypeScore=63.5059;InbreedingCoeff=0.9866;MQ=71.72;MQ0=2;MQRankSum=-0.467;QD=40.07;ReadPosRankSum=1.844;VQSLOD=6.8927;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.32:0,93,1732	1/1:0,8:8:24.08:354,24,0	0/0:11,0:11:30.10:0,30,524	0/0:4,0:4:12.04:0,12,185	0/0:28,0:28:75.26:0,75,1373	1/1:1,27:28:78.26:1149,78,0	1/1:1,18:19:48.16:707,48,0	1/1:1,24:25:72.24:1060,72,0	0/0:17,0:17:48.16:0,48,876	1/1:0,18:17:51.17:751,51,0	1/1:0,23:23:57.19:839,57,0	0/0:21,0:21:60.21:0,60,1124	0/0:15,0:15:45.15:0,45,843	1/1:1,17:18:51.17:751,51,0	1/1:0,15:15:39.13:574,39,0	1/1:1,11:12:30.10:442,30,0	1/1:0,30:29:81.27:1193,81,0	1/1:2,22:24:66.22:972,66,0	1/1:1,18:19:54.17:773,54,0	1/1:0,26:26:78.18:1092,78,0	1/1:1,15:16:39.13:574,39,0	0/0:10,0:10:27.09:0,27,500	0/0:19,0:19:57.20:0,57,1067	0/0:16,0:16:45.15:0,45,843	0/0:22,0:22:66.23:0,66,1212	1/1:3,15:18:51.17:751,51,0	1/1:2,21:23:66.22:971,66,0	1/1:0,4:4:8.99:108,9,0
chr10	76774467	.	GA	G	2522.94	PASS	AB=0.746;AC=32;AF=0.571;AN=56;BaseQRankSum=1.344;DP=404;FS=8.505;HRun=15;HaplotypeScore=50.1693;InbreedingCoeff=0.4905;MQ=67.07;MQ0=1;MQRankSum=-1.167;QD=8.91;ReadPosRankSum=1.086;VQSLOD=2.4900;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:29:38.21:0,38,453	1/1:1,4:6:13.85:83,14,0	0/0:16,0:8:4.15:0,4,14	0/1:14,0:8:11.80:13,0,12	0/1:18,1:21:1.10:1,0,200	1/1:7,9:18:4.27:139,4,0	1/1:2,3:5:5.90:38,6,0	0/1:15,14:29:5.35:176,0,5	0/0:7,0:13:29.52:0,30,227	1/1:2,9:11:26.59:173,27,0	0/1:6,8:14:20.72:124,0,21	0/0:16,1:17:18.92:0,19,259	0/0:12,0:12:5.57:0,6,166	1/1:2,7:9:23.59:154,24,0	1/1:2,9:11:28.08:178,28,0	1/1:8,4:12:23.60:152,24,0	1/1:10,21:31:41.82:351,42,0	1/1:1,11:12:26.56:173,27,0	1/1:5,12:19:41.80:244,42,0	1/1:10,5:16:15.06:85,15,0	0/1:1,5:6:2.82:78,0,3	0/0:2,0:2:0:0,0,0	0/0:12,0:12:10.41:0,10,103	0/0:6,0:6:8.99:0,9,76	0/0:9,1:14:1.57:0,2,127	1/1:6,11:17:29.44:192,29,0	1/1:12,13:26:35.84:293,36,0	0/1:3,3:6:11.60:59,0,12
chr10	76775151	.	A	AT	1702.46	PASS	AB=0.978;AC=21;AF=0.375;AN=56;BaseQRankSum=13.665;DP=386;FS=3.980;HRun=0;HaplotypeScore=79.6792;InbreedingCoeff=0.0858;MQ=73.88;MQ0=1;MQRankSum=-1.758;QD=6.70;ReadPosRankSum=4.348;VQSLOD=3.3244;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.13:0,75,951	0/1:6,0:6:8.70:47,0,9	0/0:10,0:8:20.99:0,21,219	0/0:11,0:11:22.98:0,23,173	0/0:13,0:13:36.12:0,36,498	1/1:15,0:15:13.06:149,13,0	0/1:7,0:7:52.68:58,0,53	0/1:28,6:34:99:225,0,145	0/0:11,0:11:33.11:0,33,461	1/1:20,0:20:20.95:176,21,0	1/1:13,0:13:2.33:67,2,0	0/0:18,0:18:54.17:0,54,724	0/0:12,0:12:29.73:0,30,455	1/1:7,0:7:18.92:92,19,0	0/1:8,0:8:1.02:58,0,1	0/1:14,0:14:28:86,0,28	0/1:22,0:22:22.19:144,0,22	0/1:18,0:18:55.69:87,0,56	0/1:26,5:31:88.66:234,0,89	0/1:11,0:11:10.50:101,0,11	0/1:6,0:6:11.13:33,0,11	0/0:6,0:6:18.06:0,18,251	0/0:11,0:11:30.02:0,30,356	0/0:5,0:5:15.04:0,15,193	0/0:10,0:10:30.09:0,30,405	0/1:17,0:17:6.98:135,0,7	0/1:14,0:14:5.43:95,0,5	0/1:11,0:11:6.27:95,0,6
chr10	76775152	.	A	AT	3891.94	PASS	AB=0.631;AC=30;AF=0.536;AN=56;BaseQRankSum=12.695;DP=390;FS=0.816;HRun=0;HaplotypeScore=74.2603;InbreedingCoeff=0.7062;MQ=73.75;MQ0=1;MQRankSum=-1.157;QD=15.09;ReadPosRankSum=4.435;VQSLOD=5.0164;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.14:0,75,953	1/1:2,4:6:2.24:79,2,0	0/0:10,0:8:23.92:0,24,240	0/0:11,0:11:26.23:0,26,196	0/0:13,0:13:39.12:0,39,527	1/1:6,10:16:27.25:280,27,0	0/1:4,4:8:6.46:93,0,6	0/1:19,15:34:2.17:351,0,2	0/0:11,0:11:33.11:0,33,461	1/1:7,13:20:47.47:419,47,0	1/1:4,11:15:31.86:241,32,0	0/0:18,0:18:54.17:0,54,723	0/0:12,0:12:29.73:0,30,454	1/1:2,5:7:8.23:115,8,0	1/1:0,8:8:20.09:146,20,0	1/1:4,10:14:8.67:201,9,0	1/1:6,16:22:17.47:340,17,0	1/1:5,13:18:30.12:336,30,0	0/1:12,19:31:6.61:399,0,7	1/1:6,5:11:9.27:117,9,0	0/1:1,5:6:11.59:58,0,12	0/0:6,0:6:18.06:0,18,251	0/0:10,0:10:30.07:0,30,365	0/0:5,0:5:15.04:0,15,193	0/0:11,0:11:30.09:0,30,405	1/1:3,14:17:24.64:324,25,0	1/1:5,9:14:30.29:220,30,0	1/1:3,8:11:10.82:174,11,0
chr10	76775153	.	A	AT	5586.45	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=13.529;DP=386;FS=2.261;HRun=0;HaplotypeScore=67.2637;InbreedingCoeff=0.9768;MQ=70.60;MQ0=1;MQRankSum=-2.474;QD=21.65;ReadPosRankSum=4.299;VQSLOD=6.6105;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.13:0,75,949	1/1:2,4:6:12.33:128,12,0	0/0:10,0:8:24.02:0,24,256	0/0:8,0:8:20.94:0,21,182	0/0:13,0:13:39.12:0,39,504	1/1:6,10:16:41.68:408,42,0	1/1:4,4:8:13.43:169,13,0	1/1:20,15:35:52.66:590,53,0	0/0:11,0:11:33.11:0,33,452	1/1:7,13:20:56.07:523,56,0	1/1:4,11:15:36.24:337,36,0	0/0:18,0:18:54.16:0,54,698	0/0:12,0:12:29.73:0,30,439	1/1:2,5:7:20.96:186,21,0	1/1:0,7:8:20.77:184,21,0	1/1:4,10:14:26.05:273,26,0	1/1:6,16:22:48.14:497,48,0	1/1:5,13:18:21.92:358,22,0	1/1:12,19:31:50.51:644,51,0	1/1:6,5:11:25.50:226,26,0	1/1:1,5:6:8.74:97,9,0	0/0:6,0:6:18.06:0,18,251	0/0:9,0:9:27.07:0,27,331	0/0:5,0:5:15.01:0,15,178	0/0:11,0:11:33.09:0,33,430	1/1:3,14:17:41.19:427,41,0	1/1:4,9:13:29.36:274,29,0	1/1:3,8:11:27:266,27,0
chr10	76778809	.	A	ATT	11830.38	PASS	AB=0.783;AC=34;AF=0.607;AN=56;BaseQRankSum=-13.314;DP=571;FS=3.953;HRun=8;HaplotypeScore=66.5765;InbreedingCoeff=0.8683;MQ=74.54;MQ0=1;MQRankSum=0.372;QD=34.19;ReadPosRankSum=0.017;VQSLOD=4.8463;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.26:0,96,1069	1/1:2,10:12:30.10:476,30,0	0/0:11,0:10:11.77:0,12,112	0/1:12,0:12:22.31:22,0,99	0/0:18,0:18:54.09:0,54,579	1/1:2,14:16:39.13:619,39,0	1/1:2,19:24:64.68:930,65,0	1/1:7,14:22:48.16:733,48,0	0/0:15,0:15:45.12:0,45,502	1/1:6,18:24:57.19:903,57,0	1/1:5,9:14:27.05:400,27,0	0/0:27,0:27:75.19:0,75,836	0/0:21,0:21:57.15:0,57,635	1/1:3,19:23:47.65:723,48,0	1/1:1,13:15:32.60:485,33,0	0/1:3,10:13:3.35:399,0,3	1/1:3,22:25:63.21:1000,63,0	1/1:3,25:28:69.24:1095,69,0	1/1:4,10:14:27.09:429,27,0	1/1:2,12:14:33.11:524,33,0	1/1:5,23:29:59.17:874,59,0	0/0:25,0:25:69.18:0,69,769	0/0:20,0:20:54.14:0,54,602	0/0:25,0:25:69.17:0,69,769	0/0:30,0:27:81.19:0,81,892	1/1:4,22:26:66.21:1019,66,0	1/1:1,17:21:50.66:770,51,0	1/1:0,11:12:27.09:429,27,0
chr10	76781440	.	T	TTG	2700.32	PASS	AB=0.798;AC=30;AF=0.577;AN=52;BaseQRankSum=-1.810;DP=486;FS=1.355;HRun=0;HaplotypeScore=81.0367;InbreedingCoeff=0.5620;MQ=59.46;MQ0=12;MQRankSum=-0.173;QD=8.91;ReadPosRankSum=-0.916;VQSLOD=2.9025;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:18:6.86:0,7,31	1/1:3,5:8:8.91:134,9,0	./.	./.	0/0:21,0:21:18.50:0,18,188	1/1:15,8:23:9.01:134,9,0	1/1:9,5:14:9.03:134,9,0	0/1:30,0:29:11.36:56,0,11	0/0:15,0:15:24.01:0,24,240	1/1:12,2:13:9.02:116,9,0	0/1:10,7:17:39.71:133,0,40	0/0:13,0:12:14.98:0,15,141	0/0:16,0:16:8.04:0,8,63	1/1:8,5:13:9.03:134,9,0	1/1:11,14:25:2.04:333,2,0	1/1:6,5:11:15.05:224,15,0	0/1:10,16:25:2.61:208,0,3	1/1:19,2:21:8.93:178,9,0	1/1:20,0:19:16.85:206,17,0	1/1:4,9:13:8.55:73,9,0	1/1:6,0:6:8.04:67,8,0	0/0:17,0:17:15.01:0,15,154	0/0:19,0:20:20.59:0,21,197	0/0:21,0:22:34.44:0,34,327	0/0:8,0:8:6.01:0,6,65	1/1:19,8:27:27.94:338,28,0	0/1:16,3:18:16.89:276,0,17	1/1:12,4:16:11.63:144,12,0
chr10	76785253	.	CGTGTGTGT	C	5008.48	PASS	AB=0.763;AC=29;AF=0.518;AN=56;BaseQRankSum=5.078;DP=650;FS=2.444;HRun=0;HaplotypeScore=165.2330;InbreedingCoeff=0.4271;MQ=67.99;MQ0=4;MQRankSum=-6.351;QD=12.04;ReadPosRankSum=2.097;VQSLOD=3.5469;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,1:48:99:101,0,296	1/1:5,4:9:3.01:75,3,0	0/0:29,0:20:2.92:0,3,17	0/0:23,0:19:5.92:0,6,83	0/0:22,0:22:35.86:0,36,1072	1/1:8,12:21:28.20:577,28,0	0/1:12,17:30:9.06:267,0,9	1/1:33,0:33:14.42:182,14,0	0/0:14,0:22:15.05:0,15,506	1/1:11,0:12:6:83,6,0	0/1:12,1:14:26.86:179,0,27	0/0:23,0:23:33.08:0,33,1002	0/0:18,0:18:30.08:0,30,935	1/1:15,14:32:26.92:561,27,0	1/1:9,5:15:9.03:207,9,0	1/1:13,10:23:7.48:509,7,0	0/1:15,8:24:21.05:388,0,21	1/1:19,0:20:16.17:246,16,0	1/1:15,6:22:17.60:290,18,0	1/1:8,9:18:11.80:258,12,0	0/1:38,0:39:26.51:206,0,27	0/0:19,0:19:18.03:0,18,478	0/0:22,0:24:39.10:0,39,1122	0/0:36,0:37:57.18:0,57,1707	0/0:15,0:16:27.08:0,27,786	1/1:16,12:28:19.31:419,19,0	0/1:11,7:19:4.05:325,0,4	0/1:6,2:8:8.44:134,0,8
chr10	76785482	.	A	AC	14415.64	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-11.768;DP=641;FS=6.569;HRun=2;HaplotypeScore=64.8443;InbreedingCoeff=0.9974;MQ=86.90;MQ0=0;MQRankSum=-3.493;QD=37.25;ReadPosRankSum=-0.658;VQSLOD=5.0579;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.25:0,93,1123	1/1:0,8:8:24.08:345,24,0	0/0:21,0:21:51.98:0,52,598	0/0:24,0:24:54.09:0,54,711	0/0:24,0:24:57.18:0,57,706	1/1:1,21:22:60.20:862,60,0	1/1:3,20:23:51.17:734,51,0	1/1:3,28:31:84.27:1189,84,0	0/0:18,0:18:51.16:0,51,631	1/1:2,27:29:81.27:1165,81,0	1/1:1,8:9:15.05:215,15,0	0/0:37,0:37:96.30:0,96,1188	0/0:12,0:12:36.11:0,36,446	1/1:1,27:28:72.24:1036,72,0	1/1:1,28:29:72.24:1036,72,0	1/1:2,22:24:60.20:863,60,0	1/1:2,18:20:45.15:647,45,0	1/1:0,17:17:45.15:647,45,0	1/1:1,18:19:54.13:719,54,0	1/1:0,19:19:51.09:706,51,0	1/1:0,26:27:75.25:1079,75,0	0/0:18,0:18:50.98:0,51,596	0/0:18,0:18:48.09:0,48,560	0/0:29,0:29:84.26:0,84,1040	0/0:19,0:19:57.17:0,57,693	1/1:3,28:32:90.30:1272,90,0	1/1:0,33:33:85.53:1209,86,0	1/1:0,17:17:48.16:691,48,0
chr10	76792997	.	AT	A	902.05	PASS	AB=0.923;AC=3;AF=0.054;AN=56;BaseQRankSum=7.983;DP=701;FS=4.069;HRun=11;HaplotypeScore=70.9078;InbreedingCoeff=0.6315;MQ=72.94;MQ0=0;MQRankSum=-1.524;QD=15.29;ReadPosRankSum=2.431;VQSLOD=4.4678;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,42:47:99:991,122,0	0/0:7,0:7:18.05:0,18,192	0/0:21,0:21:11.65:0,12,260	0/1:11,1:12:15.86:16,0,34	0/0:27,0:27:66.15:0,66,691	0/0:13,0:13:30.03:0,30,296	0/0:29,1:30:59.54:0,60,824	0/0:28,0:29:59.95:0,60,601	0/0:28,1:29:44.45:0,44,651	0/0:19,1:20:42.10:0,42,442	0/0:11,0:11:30.08:0,30,320	0/0:20,1:21:23.41:0,23,423	0/0:26,0:26:72.10:0,72,723	0/0:26,1:28:47.33:0,47,665	0/0:24,1:25:44.52:0,45,673	0/0:29,0:31:53.70:0,54,750	0/0:24,0:26:72:0,72,741	0/0:30,0:31:76.25:0,76,776	0/0:25,0:27:47.76:0,48,458	0/0:32,1:33:53.49:0,53,739	0/0:27,0:27:54.13:0,54,569	0/0:15,1:16:35.90:0,36,357	0/0:24,0:24:48.12:0,48,512	0/0:33,0:33:87.20:0,87,915	0/0:34,1:35:62.57:0,63,871	0/0:30,1:31:23.47:0,23,449	0/0:27,0:28:75.13:0,75,769	0/0:12,0:13:23.89:0,24,238
chr10	76794997	.	CA	C	1849	PASS	AB=0.922;AC=38;AF=0.679;AN=56;BaseQRankSum=15.989;DP=714;FS=0.709;HRun=12;HaplotypeScore=155.4133;InbreedingCoeff=0.8276;MQ=62.71;MQ0=5;MQRankSum=-3.625;QD=3.58;ReadPosRankSum=4.338;VQSLOD=0.4779;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:46.32:134,46,0	1/1:11,0:11:14.42:43,14,0	0/1:23,3:23:39.93:40,0,114	0/1:17,1:13:34.08:34,0,133	0/0:29,1:30:51.80:0,52,683	1/1:29,0:29:42.75:124,43,0	1/1:17,0:17:16.29:48,16,0	1/1:35,0:34:52.81:171,53,0	0/0:29,0:28:59:0,59,531	1/1:35,0:35:58.68:194,59,0	1/1:24,0:23:28.46:83,28,0	0/0:18,0:18:19.48:0,19,312	0/0:36,0:36:69.17:0,69,838	1/1:37,0:36:19.70:106,20,0	1/1:22,0:22:26.45:77,26,0	1/1:29,0:29:40.73:118,41,0	1/1:25,0:25:34.62:100,35,0	1/1:29,0:29:42.77:124,43,0	1/1:23,0:23:35.50:121,35,0	1/1:29,0:29:44.80:130,45,0	1/1:17,0:17:24.43:71,24,0	0/0:22,0:24:53.11:0,53,556	0/0:20,0:20:51.03:0,51,486	0/0:20,0:20:48.07:0,48,474	0/0:20,1:21:18.84:0,19,368	1/1:25,0:25:44.99:131,45,0	1/1:35,0:35:52.95:154,53,0	1/1:14,1:14:20.36:59,20,0
chr10	76795005	.	AAAAAG	A	18428.18	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=9.307;DP=714;FS=2.110;HRun=0;HaplotypeScore=147.7743;InbreedingCoeff=0.9988;MQ=65.93;MQ0=5;MQRankSum=-4.317;QD=40.15;ReadPosRankSum=8.111;VQSLOD=4.5621;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,1:32:65.35:428,65,0	1/1:0,10:10:24.03:429,24,0	0/0:27,0:24:58.56:0,59,845	0/0:22,0:17:39.56:0,40,672	0/0:32,0:32:93.26:0,93,2249	1/1:2,27:29:66.17:1249,66,0	1/1:0,13:13:24.08:466,24,0	1/1:2,32:33:90.15:1474,90,0	0/0:30,0:30:84.19:0,84,1925	1/1:1,32:33:93.26:1599,93,0	1/1:1,23:23:48.49:858,48,0	0/0:18,0:18:49.70:0,50,1085	0/0:33,0:33:96.30:0,96,2715	1/1:3,34:36:21.95:1328,22,0	1/1:0,19:19:39.12:760,39,0	1/1:1,27:28:59.96:1171,60,0	1/1:2,22:24:51.13:994,51,0	1/1:2,30:32:63.20:1229,63,0	1/1:1,23:24:63.15:978,63,0	1/1:0,29:29:72.15:1325,72,0	1/1:1,16:17:39.08:722,39,0	0/0:25,0:25:75.14:0,75,1857	0/0:23,0:23:69.17:0,69,1610	0/0:20,0:20:60.17:0,60,1480	0/0:24,0:24:69.18:0,69,1535	1/1:1,25:26:72.17:1335,72,0	1/1:1,36:37:57.74:1497,58,0	1/1:1,10:10:30.10:586,30,0
chr10	76795006	.	AAAAG	A	11341.30	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=14.400;DP=706;FS=4.563;HRun=0;HaplotypeScore=159.3936;InbreedingCoeff=0.9993;MQ=66.82;MQ0=5;MQRankSum=-4.248;QD=25.15;ReadPosRankSum=7.617;VQSLOD=3.7745;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:70.93:1204,71,0	1/1:10,0:10:24.01:247,24,0	0/0:28,0:25:41.76:0,42,654	0/0:23,0:18:40.75:0,41,470	0/0:32,0:32:90.18:0,90,1799	1/1:28,0:28:66.14:702,66,0	1/1:13,0:13:24.06:258,24,0	1/1:33,0:33:87.46:847,87,0	0/0:28,0:28:81.08:0,81,1566	1/1:33,0:33:88.68:872,89,0	1/1:24,0:23:48.48:494,48,0	0/0:18,0:18:45.95:0,46,826	0/0:32,0:32:96.29:0,96,2260	1/1:35,0:35:51.20:759,51,0	1/1:19,0:19:39.10:422,39,0	1/1:27,0:27:60.16:650,60,0	1/1:23,0:23:51.12:551,51,0	1/1:31,0:31:63.17:683,63,0	1/1:24,0:24:61.93:562,62,0	1/1:29,0:29:72.10:752,72,0	1/1:16,0:16:39.06:410,39,0	0/0:25,0:25:69.07:0,69,1492	0/0:24,0:24:69.05:0,69,1291	0/0:20,0:20:60.13:0,60,1200	0/0:24,0:24:66.15:0,66,1270	1/1:25,0:25:72.15:762,72,0	1/1:37,0:37:78.18:843,78,0	1/1:11,0:10:30.08:325,30,0
chr10	76795995	.	C	CA	3073.51	PASS	AB=0.808;AC=35;AF=0.625;AN=56;BaseQRankSum=-5.373;DP=534;FS=5.653;HRun=14;HaplotypeScore=75.9154;InbreedingCoeff=0.0498;MQ=69.46;MQ0=0;MQRankSum=0.216;QD=6.75;ReadPosRankSum=-1.319;VQSLOD=2.3993;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:36:14.29:14,0,203	0/1:2,6:8:6.24:67,0,6	0/1:22,2:18:17.54:18,0,43	0/1:18,0:11:1.14:1,0,12	0/1:16,1:19:6.40:6,0,85	0/1:6,10:19:38.50:160,0,39	0/1:5,9:15:0.54:103,0,1	1/1:7,14:23:18.61:288,19,0	0/0:17,0:17:29.41:0,29,192	1/1:5,10:16:23.84:198,24,0	1/1:2,10:12:20.95:177,21,0	0/0:19,0:19:23.33:0,23,153	0/1:8,0:8:14.71:15,0,46	1/1:4,9:14:0.68:142,1,0	1/1:13,8:21:23.99:209,24,0	1/1:7,15:23:3.31:266,3,0	1/1:8,16:24:14.20:245,14,0	1/1:5,13:20:38.42:304,38,0	1/1:9,5:17:13.15:150,13,0	1/1:12,7:20:5:147,5,0	1/1:8,12:20:4.72:163,5,0	0/1:13,3:16:26.27:26,0,108	0/1:14,0:15:9.72:10,0,66	0/0:21,1:25:22.33:0,22,234	0/0:17,0:18:37.39:0,37,236	0/1:12,10:23:27.47:138,0,27	0/1:12,6:19:8.41:175,0,8	0/1:7,15:24:15.24:225,0,15
chr10	76798364	.	T	TG	14890.29	PASS	AB=0.795;AC=54;AF=0.964;AN=56;BaseQRankSum=-3.428;DP=495;FS=6.669;HRun=3;HaplotypeScore=126.2072;InbreedingCoeff=-0.0462;MQ=74.19;MQ0=0;MQRankSum=-3.106;QD=30.08;ReadPosRankSum=1.345;VQSLOD=3.6244;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:54.18:755,54,0	1/1:3,8:11:18.06:252,18,0	0/1:14,4:18:44.39:247,0,44	0/1:12,5:16:4.40:211,0,4	1/1:1,5:6:6.02:83,6,0	1/1:1,9:10:24.08:336,24,0	1/1:2,30:32:87.29:1218,87,0	1/1:0,14:14:39.12:530,39,0	1/1:1,21:22:60.20:838,60,0	1/1:1,17:18:54.13:705,54,0	1/1:1,7:8:15.05:209,15,0	1/1:2,20:22:54.14:734,54,0	1/1:2,15:17:42.14:588,42,0	1/1:0,21:21:63.21:881,63,0	1/1:1,10:11:27.08:361,27,0	1/1:0,13:13:39.13:545,39,0	1/1:2,22:24:60.11:795,60,0	1/1:3,18:20:57.19:798,57,0	1/1:6,15:21:45.12:593,45,0	1/1:1,7:8:15.52:209,16,0	1/1:3,45:48:66.21:919,66,0	1/1:4,8:12:18.06:252,18,0	1/1:2,5:7:3.01:42,3,0	1/1:1,29:30:60.20:840,60,0	1/1:1,15:16:42.14:587,42,0	1/1:3,18:21:54.15:735,54,0	1/1:5,13:18:36.12:503,36,0	1/1:3,3:6:9.03:126,9,0
chr10	76800352	.	AT	A	7321.13	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=10.400;DP=497;FS=10.872;HRun=9;HaplotypeScore=51.1449;InbreedingCoeff=0.9952;MQ=83.85;MQ0=0;MQRankSum=-3.478;QD=21.72;ReadPosRankSum=1.830;VQSLOD=5.1728;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:54.02:494,54,0	1/1:2,9:11:27.01:247,27,0	0/0:18,0:19:27.06:0,27,291	0/0:11,0:11:20.96:0,21,226	0/0:19,0:19:54:0,54,584	1/1:1,9:10:27.01:247,27,0	1/1:0,22:22:63.03:577,63,0	1/1:9,18:27:32.42:430,32,0	0/0:14,0:14:36.11:0,36,415	1/1:3,22:25:66.02:604,66,0	1/1:7,10:17:39:351,39,0	0/0:18,0:18:42.11:0,42,476	0/0:14,0:14:30.09:0,30,346	1/1:1,14:15:39.02:357,39,0	1/1:2,30:32:87.05:796,87,0	1/1:4,15:19:23.45:387,23,0	1/1:5,21:26:54.03:494,54,0	1/1:2,19:21:54.02:494,54,0	1/1:6,10:16:27:247,27,0	1/1:0,17:17:51.03:467,51,0	1/1:5,6:11:20.99:189,21,0	0/0:18,0:18:54.16:0,54,620	0/0:16,0:16:36.09:0,36,406	0/0:14,0:14:30.08:0,30,338	0/0:17,0:17:48.13:0,48,545	1/1:8,14:22:47.50:419,48,0	1/1:2,14:16:42.02:384,42,0	1/1:1,5:6:15.01:137,15,0
chr10	76800430	.	CAA	C	7906.89	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=3.224;DP=538;FS=4.331;HRun=12;HaplotypeScore=80.6077;InbreedingCoeff=0.9214;MQ=73.31;MQ0=5;MQRankSum=-2.009;QD=23.05;ReadPosRankSum=1.057;VQSLOD=4.7619;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.08:0,48,661	1/1:1,9:11:20.78:266,21,0	0/0:31,0:17:26.22:0,26,276	0/1:29,0:15:22.56:23,0,108	0/0:19,0:19:50.64:0,51,687	1/1:3,11:15:32.59:367,33,0	1/1:3,14:17:42.09:427,42,0	1/1:6,22:29:59.81:649,60,0	0/0:15,0:15:39.13:0,39,581	1/1:4,20:24:36.21:583,36,0	1/1:3,19:22:51.05:508,51,0	0/0:21,0:23:60.10:0,60,833	0/0:17,0:17:45.15:0,45,669	1/1:3,11:14:36.08:366,36,0	1/1:6,22:28:78.15:783,78,0	1/1:2,13:15:45.07:444,45,0	1/1:4,13:17:44.77:426,45,0	1/1:4,12:17:45.04:442,45,0	1/1:1,17:20:41.55:526,42,0	1/1:4,16:21:56.73:538,57,0	1/1:1,8:9:21.03:214,21,0	0/0:17,0:17:51:0,51,715	0/0:18,0:19:48.14:0,48,680	0/0:8,0:8:18.06:0,18,268	0/0:3,1:28:30.40:0,30,207	1/1:0,22:24:53.59:652,54,0	1/1:3,16:19:41.77:426,42,0	1/1:1,8:11:29.52:268,30,0
chr10	76805617	.	A	AAG	794.34	PASS	AB=0.911;AC=31;AF=0.646;AN=48;BaseQRankSum=5.365;DP=593;FS=0.000;HRun=0;HaplotypeScore=125.8739;InbreedingCoeff=0.4838;MQ=58.56;MQ0=11;MQRankSum=-4.659;QD=2.20;ReadPosRankSum=-1.135;VQSLOD=2.1277;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:44,0:44:20.88:161,21,0	1/1:9,0:9:7.79:31,8,0	./.	./.	1/1:33,0:31:2:154,2,0	./.	1/1:22,0:22:10.16:48,10,0	0/1:10,0:10:0:0,0,0	0/0:18,0:18:18:0,18,172	1/1:32,0:31:16.73:93,17,0	1/1:12,0:12:2.97:20,3,0	0/0:30,0:29:1.97:0,2,259	0/0:31,0:31:46.33:0,46,310	1/1:24,0:24:8.62:53,9,0	0/1:26,0:24:1.50:12,0,1	0/1:25,0:25:6.31:72,0,6	1/1:20,0:19:5.92:39,6,0	1/1:17,0:17:9.42:68,9,0	0/1:14,0:13:0:0,0,0	1/1:16,0:16:2.85:21,3,0	./.	0/0:21,0:21:17.65:0,18,148	0/0:19,0:20:8.95:0,9,68	0/0:28,0:29:10.37:0,10,178	0/1:5,13:19:5.13:81,0,5	1/1:17,0:16:3.37:10,3,0	1/1:15,0:15:13.13:74,13,0	1/1:5,0:5:2.37:8,2,0
chr10	76805634	.	A	AGAGAGAGAGA	1888.25	PASS	AB=1.000;AC=37;AF=0.685;AN=54;BaseQRankSum=2.498;DP=532;FS=8.759;HRun=0;HaplotypeScore=174.8695;InbreedingCoeff=0.3463;MQ=44.52;MQ0=20;MQRankSum=-5.900;QD=4.77;ReadPosRankSum=-5.858;VQSLOD=-0.3358;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:38:18.51:220,19,0	1/1:11,0:9:6.02:126,6,0	./.	0/0:19,0:6:0.47:0,0,1	0/1:32,0:30:40.18:40,0,142	1/1:18,0:17:1.41:2,1,0	1/1:18,0:18:8.59:77,9,0	1/1:17,0:16:3.44:21,3,0	0/0:15,0:15:18.03:0,18,257	1/1:27,0:26:35.76:385,36,0	1/1:12,0:12:2.95:20,3,0	0/0:30,0:29:3.37:0,3,920	0/1:28,0:28:7.89:8,0,1054	1/1:17,0:17:8.84:113,9,0	1/1:22,0:20:5.92:68,6,0	0/1:22,0:21:72.63:232,0,73	0/1:18,0:17:2.71:137,0,3	1/1:14,0:13:15.42:166,15,0	1/1:10,0:9:5.93:40,6,0	1/1:15,0:15:4.78:45,5,0	1/1:14,6:17:0.47:1,0,0	0/0:20,0:20:17.59:0,18,421	0/0:20,0:20:9.03:0,9,264	0/1:23,0:23:8.20:8,0,543	0/0:20,0:19:8.92:0,9,115	1/1:11,0:10:10.49:69,10,0	1/1:15,0:14:18.47:222,18,0	1/1:6,0:5:3.01:48,3,0
chr10	76805648	.	A	AGTGTGTGT	1394.98	PASS	AB=0.982;AC=15;AF=0.288;AN=52;BaseQRankSum=5.548;DP=469;FS=36.658;HRun=0;HaplotypeScore=169.9570;InbreedingCoeff=-0.1185;MQ=37.81;MQ0=19;MQRankSum=-4.808;QD=7.79;ReadPosRankSum=-1.655;VQSLOD=1.1419;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:23.98:0,24,334	0/1:12,0:10:39.99:176,0,40	0/0:8,0:1:3.01:0,3,32	./.	0/0:29,0:27:32.29:0,32,467	1/1:11,0:10:11.53:219,12,0	0/1:16,0:16:62.38:62,0,124	0/1:19,0:18:88.58:89,0,396	0/0:16,0:16:21.07:0,21,500	0/1:23,0:22:99:348,0,544	0/0:11,0:11:2.77:0,3,37	0/0:30,0:29:62.53:0,63,1551	0/0:29,0:29:62.57:0,63,1531	0/1:17,0:17:72.55:73,0,91	0/1:16,0:14:13.60:58,0,14	0/0:17,4:20:8.38:0,8,110	0/1:13,0:12:72.57:73,0,92	0/1:12,0:11:29.58:30,0,230	0/0:9,0:9:17.96:0,18,214	0/1:9,0:12:10.75:11,0,25	./.	0/0:24,0:24:30.02:0,30,699	0/0:18,0:18:20.28:0,20,469	0/0:19,0:19:30.38:0,30,725	0/0:20,0:19:18.04:0,18,292	0/1:9,0:9:79.71:80,0,204	0/1:14,0:13:99:286,0,141	1/1:5,0:4:3.01:46,3,0
chr10	76805652	.	A	AGTGTGTGTGTGT	3679.17	PASS	AB=0.828;AC=33;AF=0.635;AN=52;BaseQRankSum=-0.183;DP=497;FS=14.189;HRun=0;HaplotypeScore=230.6086;InbreedingCoeff=0.5730;MQ=36.91;MQ0=18;MQRankSum=-6.710;QD=12.56;ReadPosRankSum=-5.028;VQSLOD=0.0342;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:34:0:0,0,0	0/1:10,4:13:12.43:306,0,12	1/1:10,0:2:2.37:8,2,0	0/1:9,0:2:0:0,0,0	1/1:31,0:29:2.81:13,3,0	1/1:13,0:12:18.06:533,18,0	1/1:19,0:19:8.21:221,8,0	1/1:19,0:18:12.04:291,12,0	0/0:17,0:17:12.04:0,12,395	1/1:18,4:21:14.64:589,15,0	./.	0/0:29,0:28:26.77:0,27,857	0/0:30,0:30:35.46:0,35,882	1/1:12,2:16:3.01:118,3,0	1/1:16,4:19:6.02:194,6,0	0/0:24,0:23:0.15:0,0,0	1/1:12,2:13:6.96:229,7,0	1/1:12,0:11:9.50:175,10,0	1/1:11,0:11:3.01:47,3,0	1/1:14,0:14:3.47:52,3,0	./.	0/0:22,0:24:11.43:0,11,290	0/0:15,0:15:8.06:0,8,239	0/0:19,0:19:7.45:0,7,266	0/0:27,0:26:6.24:0,6,402	1/1:10,0:10:12.03:267,12,0	1/1:12,1:15:8.82:459,9,0	1/1:2,0:4:6.02:177,6,0
chr10	76805715	.	T	TAAGCCAGACCCAGTGAAAAAAGTTTCT	2125.40	PASS	AB=0.683;AC=12;AF=0.857;AN=14;BaseQRankSum=-1.836;DP=23;FS=14.548;HRun=0;HaplotypeScore=56.4794;MQ=188.01;MQ0=0;MQRankSum=-0.134;QD=96.61;ReadPosRankSum=0.313;VQSLOD=1.5644;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:5,1:10:26.73:1329,0,27	0/1:4,0:7:14.42:699,0,14	./.	./.	./.	1/1:1,0:1:2.97:20,3,0	./.	./.	./.	1/1:1,0:1:3:25,3,0	1/1:1,0:1:3.01:51,3,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:1,0:1:3.01:54,3,0	1/1:1,0:1:3:25,3,0	./.	./.	./.	./.	./.
chr10	76807844	.	G	GA	17148.27	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=14.134;DP=702;FS=2.566;HRun=2;HaplotypeScore=106.5800;InbreedingCoeff=0.9646;MQ=81.04;MQ0=0;MQRankSum=-3.269;QD=36.18;ReadPosRankSum=1.951;VQSLOD=4.9532;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,156,1881	1/1:0,9:9:27.09:385,27,0	0/0:14,0:14:9.56:0,10,344	0/0:22,0:22:57.10:0,57,628	1/1:2,20:22:51.17:709,51,0	1/1:1,16:17:42.14:601,42,0	1/1:1,28:29:57.19:815,57,0	1/1:2,24:27:72.21:969,72,0	0/0:21,0:21:60.16:0,60,717	1/1:1,21:22:63.16:832,63,0	1/1:2,13:15:39.13:558,39,0	0/0:23,0:23:69.20:0,69,841	0/0:30,0:30:81.23:0,81,975	1/1:1,31:32:75.25:1071,75,0	1/1:0,36:36:99:1416,99,0	1/1:1,15:16:45.15:644,45,0	1/1:1,31:32:78.26:1102,78,0	1/1:2,42:44:99:1629,114,0	1/1:1,15:16:45.15:643,45,0	1/1:5,18:23:57.09:743,57,0	1/1:2,38:40:99:1417,99,0	0/0:25,0:25:71.79:0,72,840	0/0:16,0:16:42.12:0,42,506	0/0:24,0:24:66.20:0,66,805	1/1:0,27:27:63.21:902,63,0	1/1:0,44:44:99:1810,132,0	1/1:0,22:22:60.20:858,60,0	1/1:0,1:1:3.01:43,3,0
chr10	76808070	.	GCCTTCATTTTTCAGAGTACAAGGTCA	G	3049.09	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.487;DP=720;FS=0.967;HRun=0;HaplotypeScore=455.7485;InbreedingCoeff=0.9983;MQ=85.57;MQ0=0;MQRankSum=-6.593;QD=87.12;ReadPosRankSum=1.863;VQSLOD=1.7789;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,24:35:45.15:3144,45,0	0/0:10,0:10:30.10:0,30,3295	0/0:27,0:27:59.41:0,59,3219	0/0:21,0:21:60.18:0,60,2807	0/0:21,0:21:63.22:0,63,6077	0/0:26,0:26:75.26:0,75,7749	0/0:46,0:46:99:0,132,12305	0/0:31,0:30:90.28:0,90,7639	0/0:29,0:29:84.29:0,84,9252	0/0:27,0:27:81.28:0,81,9039	0/0:12,0:12:36.12:0,36,3871	0/0:31,0:31:87.30:0,87,9596	0/0:28,0:28:84.27:0,84,8191	0/0:36,0:36:99:0,105,10735	0/0:36,0:36:99:0,105,11327	0/0:21,0:21:63.22:0,63,6868	0/0:30,0:30:84.29:0,84,8969	0/0:16,0:16:48.16:0,48,5833	0/0:16,0:16:45.15:0,45,4042	0/0:20,0:20:60.21:0,60,6010	0/0:36,0:36:99:0,108,10457	0/0:25,0:25:72.25:0,72,7316	0/0:16,0:16:48.16:0,48,4780	0/0:34,0:34:99:0,99,10552	0/0:26,0:26:75.26:0,75,8088	0/0:28,0:28:84.27:0,84,7960	0/0:27,0:26:78.25:0,78,8663	0/0:9,0:9:27.09:0,27,2313
chr10	76816837	.	G	GA	11094.45	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-15.484;DP=703;FS=1.338;HRun=9;HaplotypeScore=63.3177;InbreedingCoeff=0.9983;MQ=72.11;MQ0=0;MQRankSum=-0.512;QD=25.80;ReadPosRankSum=2.609;VQSLOD=5.5378;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,144,1227	1/1:1,8:9:21.06:232,21,0	0/0:18,0:17:30.17:0,30,260	0/0:12,0:12:20.06:0,20,151	0/0:20,0:19:56.99:0,57,494	1/1:3,23:26:57.15:631,57,0	1/1:4,27:31:49.16:771,49,0	1/1:12,30:42:38.91:822,39,0	0/0:14,0:14:35.94:0,36,302	1/1:2,14:16:42.11:464,42,0	1/1:3,13:17:42.10:455,42,0	0/0:33,0:33:86.33:0,86,733	0/0:26,0:26:53.96:0,54,465	1/1:4,22:26:51.14:564,51,0	1/1:4,27:31:75.20:829,75,0	1/1:4,25:29:66.18:730,66,0	1/1:1,27:28:60.16:664,60,0	1/1:0,23:24:69.02:744,69,0	1/1:3,22:25:66.12:701,66,0	1/1:3,10:13:24.02:297,24,0	1/1:5,31:37:96.09:1043,96,0	0/0:15,0:15:35.88:0,36,304	0/0:22,0:22:53.99:0,54,468	0/0:29,0:32:85.98:0,86,726	0/0:24,0:24:65.95:0,66,565	1/1:3,31:34:93.21:1008,93,0	1/1:3,20:23:51.14:564,51,0	1/1:1,18:19:53.88:576,54,0
chr10	76832436	.	GA	G	1544.05	PASS	AB=1.000;AC=52;AF=0.929;AN=56;BaseQRankSum=-1.486;DP=540;FS=4.450;HRun=1;HaplotypeScore=150.2688;InbreedingCoeff=-0.1137;MQ=80.87;MQ0=1;MQRankSum=1.457;QD=2.86;ReadPosRankSum=8.633;VQSLOD=-0.5160;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,2:39:1.34:93,1,0	1/1:7,0:7:10.88:28,11,0	0/1:21,0:21:23.89:60,0,24	0/1:17,0:17:26.95:27,0,68	1/1:16,0:16:21.31:78,21,0	1/1:22,0:22:16.91:85,17,0	1/1:18,0:18:21.77:57,22,0	1/1:33,0:33:29.29:104,29,0	1/1:19,0:19:32.33:107,32,0	1/1:12,2:14:20.43:55,20,0	1/1:7,0:7:8.52:23,9,0	1/1:24,0:24:27.99:73,28,0	1/1:11,0:11:13.99:37,14,0	1/1:15,0:15:2.21:30,2,0	1/1:23,0:23:30.93:93,31,0	1/1:19,0:19:25.58:67,26,0	1/1:34,0:34:46.91:121,47,0	1/1:18,0:18:23.32:61,23,0	0/1:16,0:16:11.87:34,0,12	1/1:7,0:7:9.02:23,9,0	1/1:38,0:37:2.41:67,2,0	1/1:14,5:19:16.37:44,16,0	1/1:12,2:14:9.75:72,10,0	1/1:35,0:34:32.24:99,32,0	1/1:17,0:17:5.77:32,6,0	1/1:17,0:17:7.94:44,8,0	0/1:14,0:14:17.59:22,0,18	1/1:6,0:6:9.33:24,9,0
chr10	76832664	.	GT	G	6135.41	PASS	AC=50;AF=1.000;AN=50;BaseQRankSum=-1.402;DP=238;FS=0.000;HRun=2;HaplotypeScore=267.5043;InbreedingCoeff=-0.0337;MQ=28.49;MQ0=0;MQRankSum=-0.536;QD=25.78;ReadPosRankSum=1.711;VQSLOD=3.9894;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:3:3.01:37,3,0	1/1:2,4:6:12.04:148,12,0	./.	./.	1/1:3,13:15:20.86:258,21,0	1/1:4,5:9:15.05:185,15,0	1/1:0,4:4:12.04:148,12,0	1/1:0,1:1:3.01:37,3,0	1/1:1,9:10:27.08:333,27,0	1/1:4,12:16:33.10:410,33,0	1/1:2,14:16:19.73:257,20,0	1/1:1,8:9:24.08:296,24,0	1/1:0,13:13:39.12:481,39,0	1/1:2,7:9:21.07:259,21,0	1/1:4,9:13:27.08:334,27,0	1/1:3,4:7:12.04:148,12,0	1/1:0,1:1:3.01:37,3,0	1/1:0,2:2:6.02:74,6,0	1/1:2,5:6:8.82:87,9,0	1/1:1,14:14:36.11:444,36,0	./.	1/1:5,13:18:27.04:316,27,0	1/1:2,14:16:33.10:407,33,0	1/1:0,6:6:15.05:180,15,0	1/1:0,12:12:33.10:408,33,0	1/1:5,10:15:30.09:371,30,0	1/1:0,9:9:27.08:332,27,0	1/1:0,4:4:12.04:148,12,0
chr10	76832933	.	GACAGA	G	5438.59	PASS	AB=0.879;AC=32;AF=0.593;AN=54;BaseQRankSum=4.638;DP=791;FS=1.145;HRun=0;HaplotypeScore=149.3252;InbreedingCoeff=0.8105;MQ=66.78;MQ0=13;MQRankSum=-0.292;QD=11.38;ReadPosRankSum=0.720;VQSLOD=4.3230;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:39:43.15:0,43,550	1/1:8,2:10:3.01:53,3,0	./.	0/1:73,0:33:0:0,0,0	0/0:12,0:25:36.12:0,36,686	1/1:22,13:35:15.05:264,15,0	1/1:23,0:23:12.04:204,12,0	0/0:39,0:38:0:0,0,0	0/0:22,0:22:33.09:0,33,841	1/1:17,13:30:36.11:594,36,0	1/1:14,11:25:18.06:312,18,0	0/0:19,0:19:24.08:0,24,612	0/0:19,0:19:27.09:0,27,725	1/1:13,10:23:15.05:262,15,0	1/1:21,20:41:30.10:528,30,0	1/1:15,15:30:27.09:472,27,0	1/1:12,17:29:30.10:528,30,0	0/1:17,8:25:16.21:296,0,16	1/1:17,7:24:21.07:369,21,0	1/1:15,11:26:18.06:298,18,0	1/1:14,6:20:15.05:263,15,0	0/0:23,0:23:20.99:0,21,480	0/0:21,0:21:18.06:0,18,484	0/0:44,0:44:54.19:0,54,1450	0/0:16,0:22:15.05:0,15,313	1/1:25,7:33:18.06:314,18,0	1/1:10,13:23:33.11:577,33,0	1/1:5,3:8:6.02:106,6,0
chr10	76833197	.	GTT	G	3808.56	PASS	AB=0.646;AC=29;AF=0.518;AN=56;BaseQRankSum=0.479;DP=642;FS=3.289;HRun=15;HaplotypeScore=91.6578;InbreedingCoeff=0.5832;MQ=80.91;MQ0=2;MQRankSum=-1.042;QD=10.29;ReadPosRankSum=6.009;VQSLOD=2.5690;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,1:37:88.89:0,89,1020	1/1:0,3:3:6:53,6,0	0/0:35,0:22:30.15:0,30,298	0/0:25,0:22:35.51:0,36,290	0/0:14,2:31:0.06:0,0,209	1/1:7,23:33:41.34:444,41,0	0/1:7,11:20:6.56:188,0,7	1/1:13,11:27:9.52:260,10,0	0/0:16,0:18:41.56:0,42,459	1/1:16,15:32:32.37:328,32,0	0/1:11,11:22:32.96:205,0,33	0/0:20,0:22:51.09:0,51,566	0/0:20,1:21:24.59:0,25,473	0/1:15,8:24:7.24:138,0,7	1/1:11,20:32:50.47:424,50,0	1/1:6,6:11:10.94:104,11,0	0/1:5,18:27:13.91:251,0,14	1/1:8,9:19:26.10:251,26,0	1/1:3,9:16:19.73:222,20,0	1/1:11,17:31:27.09:357,27,0	1/1:9,8:19:2.10:158,2,0	0/0:16,0:23:50.58:0,51,529	0/0:24,0:28:64.08:0,64,633	0/0:13,0:14:29.55:0,30,321	0/0:10,0:18:21.06:0,21,164	1/1:11,8:22:20.14:200,20,0	0/1:10,8:19:8.56:112,0,9	1/1:7,4:12:14.58:117,15,0
chr10	76834511	.	T	TAACAAC	16966.55	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-12.264;DP=981;FS=0.000;HRun=0;HaplotypeScore=189.6295;InbreedingCoeff=0.9741;MQ=59.19;MQ0=5;MQRankSum=-9.027;QD=31.30;ReadPosRankSum=-2.312;VQSLOD=4.0844;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:71,0:71:99:0,160,3046	1/1:2,10:12:11.84:334,12,0	0/0:45,0:35:44.18:0,44,625	0/0:50,0:41:47.77:0,48,904	0/0:24,0:24:60.06:0,60,1069	1/1:6,18:27:30.10:1005,30,0	1/1:11,24:37:21.06:704,21,0	1/1:15,20:41:74.37:1137,74,0	0/0:44,0:44:99:0,99,1669	1/1:8,31:43:98.56:2109,99,0	1/1:2,14:17:26.96:555,27,0	0/0:42,0:42:99:0,102,2108	0/0:35,0:35:83.78:0,84,1362	1/1:8,30:39:42.14:1336,42,0	1/1:7,28:36:45.15:1427,45,0	1/1:7,18:25:27.09:905,27,0	1/1:11,20:33:33.11:1106,33,0	1/1:10,11:22:6.49:183,6,0	1/1:10,24:38:82.27:1425,82,0	1/1:9,16:27:47.69:920,48,0	1/1:20,37:66:15:317,15,0	0/0:32,0:32:72.01:0,72,1361	0/0:21,0:21:54.14:0,54,1056	0/0:56,0:56:99:0,141,2749	0/0:18,0:18:32.21:0,32,860	1/1:14,25:41:75.63:1723,76,0	1/1:8,20:29:42.14:1377,42,0	1/1:0,6:9:12.04:402,12,0
chr10	76834702	.	C	CAGT	2072.50	PASS	AB=0.962;AC=17;AF=0.327;AN=52;BaseQRankSum=7.806;DP=762;FS=16.792;HRun=0;HaplotypeScore=128.3607;InbreedingCoeff=-0.4926;MQ=63.18;MQ0=6;MQRankSum=-4.820;QD=4.44;ReadPosRankSum=-5.133;VQSLOD=-0.5311;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:30:6.20:6,0,54	0/1:16,0:16:47.51:95,0,48	./.	./.	0/1:16,11:29:9.78:214,0,10	0/0:22,0:21:9.13:0,9,86	0/1:35,0:35:27.14:27,0,380	0/0:27,0:27:1.40:0,1,139	0/0:32,0:32:57.11:0,57,693	0/1:26,0:26:99:117,0,100	0/0:26,0:26:6.35:0,6,142	0/0:24,0:25:42.10:0,42,532	0/0:39,0:39:66.14:0,66,827	0/1:26,0:26:21.26:159,0,21	0/1:37,0:37:99:285,0,124	0/1:39,0:39:94.21:374,0,94	0/1:28,0:28:99:138,0,140	0/1:21,0:21:99:196,0,134	0/1:23,0:22:13.31:13,0,154	0/1:29,0:29:77.54:78,0,230	0/1:40,0:39:84.21:84,0,243	0/0:29,0:29:57.17:0,57,732	0/0:21,0:22:27.04:0,27,321	0/0:30,0:32:51.07:0,51,613	0/1:10,10:20:24.26:214,0,24	0/1:29,0:29:33.41:33,0,434	0/1:25,0:25:51.82:157,0,52	0/1:13,0:13:29.31:29,0,164
chr10	76834742	.	A	AGTAGTC	6737.89	PASS	AB=0.667;AC=31;AF=0.574;AN=54;BaseQRankSum=-5.196;DP=841;FS=18.369;HRun=0;HaplotypeScore=157.9770;InbreedingCoeff=0.8547;MQ=57.94;MQ0=18;MQRankSum=-3.803;QD=13.61;ReadPosRankSum=1.847;VQSLOD=3.2968;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:59.92:0,60,562	1/1:3,12:16:12.04:314,12,0	0/0:27,0:11:23.39:0,23,267	0/0:31,0:13:19.93:0,20,284	0/0:26,0:26:24.79:0,25,294	./.	1/1:19,0:38:24.08:300,24,0	1/1:40,0:34:64.64:471,65,0	0/0:34,0:33:72.04:0,72,958	1/1:6,1:26:58.56:584,59,0	1/1:14,16:31:1.67:11,2,0	0/0:29,0:29:78.03:0,78,1025	0/0:33,0:33:72.12:0,72,1174	1/1:5,24:32:15.05:427,15,0	1/1:9,31:42:32.32:919,32,0	1/1:9,29:42:35.83:979,36,0	1/1:10,18:29:17.66:442,18,0	1/1:19,1:24:53.40:613,53,0	1/1:28,0:23:26.93:264,27,0	0/1:12,7:23:4.96:38,0,5	1/1:18,0:38:5.84:196,6,0	0/0:33,0:33:78.03:0,78,1004	0/0:15,0:15:38.98:0,39,487	0/0:36,0:36:59.29:0,59,982	0/0:21,0:20:3.76:0,4,151	1/1:12,24:40:67.32:702,67,0	1/1:4,21:31:15.05:425,15,0	1/1:11,0:11:8.78:55,9,0
chr10	76836268	.	CT	C	8587.15	PASS	AB=0.779;AC=41;AF=0.732;AN=56;BaseQRankSum=5.978;DP=641;FS=1.217;HRun=11;HaplotypeScore=75.6605;InbreedingCoeff=0.8060;MQ=77.06;MQ0=0;MQRankSum=-0.237;QD=16.80;ReadPosRankSum=2.680;VQSLOD=5.8302;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,36:44:95.87:787,96,0	1/1:0,6:6:17.98:148,18,0	0/1:22,4:24:36.75:37,0,298	0/1:13,1:13:0.01:0,0,79	1/1:1,21:23:61.96:498,62,0	1/1:3,19:22:53.93:443,54,0	1/1:2,20:23:43.98:351,44,0	1/1:10,25:35:65.51:532,66,0	0/0:19,0:19:42.06:0,42,425	1/1:3,21:24:62.90:515,63,0	1/1:1,14:15:32.94:271,33,0	0/0:23,0:23:57.12:0,57,595	0/0:22,2:24:12.26:0,12,553	1/1:3,26:31:72.99:578,73,0	1/1:3,29:32:74.90:616,75,0	0/1:4,29:34:0.94:601,0,1	1/1:0,22:22:59.93:493,60,0	1/1:3,11:14:29.97:246,30,0	1/1:11,14:24:41.88:339,42,0	1/1:1,15:17:37.97:301,38,0	1/1:3,17:21:43.98:351,44,0	0/0:23,1:24:30.73:0,31,515	0/0:20,1:21:29.47:0,29,501	0/0:17,0:19:50.78:0,51,501	1/1:2,14:18:34.04:258,34,0	1/1:6,21:27:53.87:443,54,0	1/1:2,24:26:65.91:542,66,0	1/1:1,10:11:29.87:238,30,0
chr10	76839595	.	CGTGTGTGTGTGTGTGTATGTGTGTGTGT	C	1126.86	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.460;DP=814;FS=7.319;HRun=0;HaplotypeScore=556.9110;InbreedingCoeff=0.9796;MQ=65.15;MQ0=6;MQRankSum=-4.445;QD=43.34;ReadPosRankSum=-3.078;VQSLOD=-0.3343;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,12:26:27.09:1221,27,0	0/0:8,0:8:18.06:0,18,1821	0/0:36,0:16:21.06:0,21,1089	0/0:32,0:14:24.08:0,24,1202	0/0:21,0:21:29.26:0,29,1871	0/0:31,0:31:56.30:0,56,5500	0/0:21,0:22:45.14:0,45,3748	0/0:28,0:28:60.21:0,60,4753	0/0:40,0:42:99:0,99,11029	0/0:26,0:25:57.19:0,57,4504	0/0:13,0:13:24.07:0,24,2291	0/0:34,0:34:93.32:0,93,10174	0/0:34,0:34:93.32:0,93,10636	0/0:35,0:35:87.30:0,87,9337	0/0:46,0:46:99:0,108,11034	0/0:42,0:42:93.32:0,93,8530	0/0:26,0:26:57.20:0,57,4902	0/0:32,0:32:80.81:0,81,8037	0/0:15,0:15:27.09:0,27,2055	0/0:20,0:20:45.08:0,45,3978	0/0:69,0:69:99:0,138,12781	0/0:30,0:30:57.20:0,57,6267	0/0:19,0:19:54.19:0,54,6045	0/0:32,0:32:84.27:0,84,9836	0/0:21,0:21:39.60:0,40,2168	0/0:33,0:33:84.28:0,84,7276	0/0:28,0:28:59.20:0,59,5465	0/0:13,0:13:24.08:0,24,2403
chr10	76839612	.	A	ATG	9116.45	PASS	AB=0.623;AC=33;AF=0.589;AN=56;BaseQRankSum=7.347;DP=862;FS=0.000;HRun=0;HaplotypeScore=135.5591;InbreedingCoeff=0.5857;MQ=58.04;MQ0=5;MQRankSum=-0.752;QD=15.64;ReadPosRankSum=1.451;VQSLOD=4.8181;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:8.99:0,9,43	0/1:4,11:15:51.04:169,0,51	0/0:33,0:11:15.81:0,16,126	0/0:32,0:10:6.01:0,6,63	1/1:13,1:31:16.40:71,16,0	0/1:9,14:23:68.35:384,0,68	1/1:8,13:21:24.08:357,24,0	1/1:20,17:37:50.02:633,50,0	0/0:42,0:42:84.24:0,84,968	1/1:13,20:32:62.47:809,62,0	1/1:7,8:15:12.04:187,12,0	0/0:37,0:38:70.97:0,71,834	0/0:34,0:35:81.06:0,81,907	1/1:8,30:39:34.19:941,34,0	0/1:17,31:49:28.61:867,0,29	1/1:13,26:39:54.18:841,54,0	1/1:15,19:34:24.55:356,25,0	1/1:9,23:32:50.53:849,51,0	1/1:13,6:20:20.96:272,21,0	0/1:12,10:23:13.75:259,0,14	0/1:32,43:75:15.27:694,0,15	0/0:32,0:33:68.40:0,68,750	0/0:22,0:22:44.34:0,44,492	0/0:28,0:32:68.86:0,69,758	1/1:11,0:25:9:79,9,0	1/1:18,18:36:16.31:692,16,0	1/1:8,18:26:32.90:515,33,0	1/1:5,4:10:9.03:140,9,0
chr10	76846768	.	CT	C	15406.31	PASS	AB=0.536;AC=33;AF=0.589;AN=56;BaseQRankSum=11.189;DP=697;FS=8.341;HRun=2;HaplotypeScore=68.5129;InbreedingCoeff=0.9411;MQ=83.86;MQ0=0;MQRankSum=-2.991;QD=34.86;ReadPosRankSum=2.821;VQSLOD=5.1110;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1829	1/1:1,9:10:27.09:350,27,0	0/0:21,0:21:60.20:0,60,898	0/0:22,0:22:60.18:0,60,862	0/0:17,0:17:51.11:0,51,717	1/1:0,27:27:72.23:934,72,0	1/1:1,32:33:84.27:1091,84,0	1/1:0,19:19:57.16:711,57,0	0/0:23,0:23:69.23:0,69,1033	1/1:0,36:36:99:1308,105,0	1/1:1,17:18:48.16:623,48,0	0/0:36,0:36:99:0,108,1558	0/0:28,0:28:81.24:0,81,1172	1/1:0,31:31:84.74:1088,85,0	1/1:0,27:27:75.24:974,75,0	0/1:2,13:15:5.85:428,0,6	1/1:0,37:37:99:1285,99,0	1/1:1,21:22:60.19:779,60,0	1/1:0,20:20:60.17:751,60,0	1/1:1,18:19:48.16:623,48,0	1/1:1,50:51:99:1753,135,0	0/0:16,0:16:48.16:0,48,717	0/0:11,0:11:30.10:0,30,449	0/0:23,0:23:69.23:0,69,1030	0/0:16,0:16:42.11:0,42,573	1/1:0,30:30:87.27:1112,87,0	1/1:0,33:33:87.28:1129,87,0	1/1:0,14:14:36.12:467,36,0
chr10	76848380	.	G	GT	8914.36	PASS	AB=0.580;AC=34;AF=0.607;AN=56;BaseQRankSum=-14.437;DP=681;FS=1.029;HRun=10;HaplotypeScore=65.1622;InbreedingCoeff=0.8169;MQ=66.94;MQ0=1;MQRankSum=-1.655;QD=20.54;ReadPosRankSum=-0.579;VQSLOD=5.5336;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,26:36:1.67:600,0,2	0/1:3,8:11:22.16:197,0,22	0/0:8,0:7:2.42:0,2,62	0/0:27,0:20:26.83:0,27,223	0/0:24,0:24:56.91:0,57,467	1/1:5,17:22:1.89:431,2,0	1/1:6,15:21:18:392,18,0	1/1:9,34:44:86.98:874,87,0	0/0:31,0:31:92.87:0,93,758	1/1:7,22:29:41.50:631,41,0	1/1:5,14:19:14.08:373,14,0	0/0:32,0:34:76.92:0,77,621	0/0:19,0:19:53.92:0,54,443	1/1:6,28:34:66.17:704,66,0	1/1:4,21:25:32.50:551,32,0	1/1:5,17:22:17.46:391,17,0	1/1:3,18:21:23.50:455,23,0	1/1:3,12:15:31.63:324,32,0	1/1:2,16:20:46.65:513,47,0	1/1:6,17:24:56.66:548,57,0	1/1:3,17:20:20.49:423,20,0	0/0:29,0:30:79.78:0,80,636	0/0:21,0:21:50.90:0,51,415	0/0:26,0:26:68.89:0,69,563	0/0:26,0:26:69.61:0,70,541	1/1:4,18:23:53.96:550,54,0	1/1:7,24:31:48.11:512,48,0	1/1:1,16:16:42.11:447,42,0
chr10	76849470	.	GGTGTGTGTGTGTGTGTGT	G	2892.42	PASS	AB=0.978;AC=26;AF=0.520;AN=50;BaseQRankSum=6.053;DP=590;FS=31.449;HRun=0;HaplotypeScore=247.2627;InbreedingCoeff=0.5611;MQ=63.88;MQ0=19;MQRankSum=-3.554;QD=8.53;ReadPosRankSum=0.415;VQSLOD=1.3627;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:29:15.05:0,15,398	0/0:5,0:5:2.80:0,3,13	./.	./.	0/0:12,0:12:8.98:0,9,75	1/1:16,0:14:2.92:17,3,0	1/1:34,0:34:29.15:262,29,0	1/1:22,0:21:0.85:16,1,0	0/0:23,0:22:33.08:0,33,1601	1/1:15,7:21:15.05:330,15,0	./.	0/0:30,0:29:30.06:0,30,1307	0/0:22,0:22:29.43:0,29,1297	1/1:14,8:22:6.02:289,6,0	1/1:13,5:17:3.96:267,4,0	1/1:13,0:13:8.54:68,9,0	1/1:30,9:39:13.75:437,14,0	0/1:21,0:22:17.27:325,0,17	1/1:13,0:14:2.30:143,2,0	0/0:8,0:7:0:0,0,0	0/1:55,0:53:10.96:72,0,11	0/0:6,0:6:9.03:0,9,502	0/0:8,0:9:14.40:0,14,898	0/0:41,0:41:60.21:0,60,3517	0/0:11,0:11:8.94:0,9,70	1/1:16,9:25:5.44:299,5,0	1/1:15,8:22:3:144,3,0	1/1:7,1:10:9.03:396,9,0
chr10	76853285	.	T	TACACACACACACAC	16042.01	PASS	AB=1.000;AC=39;AF=0.750;AN=52;BaseQRankSum=0.508;DP=750;FS=4.263;HRun=0;HaplotypeScore=276.9478;InbreedingCoeff=0.7937;MQ=58.69;MQ0=14;MQRankSum=-10.257;QD=29.76;ReadPosRankSum=-4.466;VQSLOD=3.0448;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:36:14.80:150,15,0	1/1:5,4:10:12.04:762,12,0	0/0:31,0:19:3.01:0,3,37	./.	1/1:19,0:28:6.02:172,6,0	1/1:14,6:20:6.02:402,6,0	1/1:40,0:37:26.70:657,27,0	1/1:31,0:30:42.11:1131,42,0	0/0:21,0:20:39.12:0,39,1304	1/1:19,0:18:24.07:872,24,0	1/1:11,5:19:13.22:941,13,0	0/1:30,0:31:6.94:7,0,2240	0/0:23,0:28:54.17:0,54,1795	1/1:18,5:24:16.23:1146,16,0	1/1:22,11:34:27.09:1716,27,0	1/1:20,1:32:27.09:1582,27,0	1/1:22,0:22:24.01:714,24,0	1/1:12,3:16:21.07:1085,21,0	1/1:21,0:19:15.78:334,16,0	1/1:30,0:30:10.19:622,10,0	1/1:25,0:23:6.49:130,6,0	0/0:26,0:26:51.09:0,51,1386	0/0:16,0:20:37.34:0,37,933	0/0:41,0:41:87.26:0,87,2907	1/1:33,0:40:13.45:309,13,0	1/1:32,0:30:40.16:1629,40,0	1/1:24,3:28:33.58:1681,34,0	./.
chr10	76855447	.	TACATGCACACGC	T	3814.63	PASS	AB=1.000;AC=24;AF=0.500;AN=48;BaseQRankSum=8.019;DP=489;FS=1.218;HRun=0;HaplotypeScore=127.1771;InbreedingCoeff=0.4873;MQ=73.61;MQ0=6;MQRankSum=-0.433;QD=16.03;ReadPosRankSum=-0.614;VQSLOD=2.5988;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:2.96:63,3,0	0/0:13,0:13:0.26:0,0,1	0/0:27,0:20:56.93:0,57,1257	0/0:41,0:25:58.87:0,59,1173	./.	./.	1/1:13,0:13:6.02:107,6,0	1/1:22,0:22:60.19:1142,60,0	0/0:13,0:13:36.12:0,36,1173	1/1:13,0:13:26.82:548,27,0	./.	0/0:15,0:15:39.13:0,39,1355	0/0:9,0:9:27.08:0,27,834	1/1:1,11:12:3.01:113,3,0	0/1:11,0:11:0:0,0,0	1/1:17,0:16:2.84:57,3,0	1/1:21,0:21:9.03:169,9,0	1/1:18,1:19:5.95:56,6,0	0/1:16,0:16:28.50:603,0,29	1/1:12,0:12:3.01:56,3,0	0/0:27,0:27:0.47:0,0,1	0/0:24,0:24:66.23:0,66,2211	0/0:12,0:12:33.11:0,33,901	0/0:28,0:28:75.26:0,75,2336	1/1:1,18:19:3.01:113,3,0	0/1:19,0:17:16.87:572,0,17	0/1:21,0:21:16.33:216,0,16	./.
chr10	76855448	.	ACATGCACACG	A	4004.37	PASS	AB=0.500;AC=27;AF=0.563;AN=48;BaseQRankSum=8.517;DP=485;FS=0.572;HRun=0;HaplotypeScore=114.7125;InbreedingCoeff=0.7200;MQ=71.98;MQ0=6;MQRankSum=-0.443;QD=17.04;ReadPosRankSum=-0.823;VQSLOD=2.3691;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:2.96:63,3,0	0/0:13,0:13:0.26:0,0,1	0/0:26,0:19:56.93:0,57,1257	0/0:40,0:24:57.74:0,58,1171	./.	./.	1/1:12,0:12:6.02:107,6,0	1/1:22,0:22:60.19:1142,60,0	0/0:13,0:13:36.12:0,36,1086	1/1:2,10:12:26.83:586,27,0	./.	0/0:14,0:14:39.13:0,39,1253	0/0:9,0:9:27.08:0,27,735	1/1:12,0:12:3.01:81,3,0	0/1:0,10:10:0:0,0,0	1/1:17,0:16:2.84:57,3,0	1/1:0,21:21:9.03:300,9,0	1/1:20,0:20:5.05:50,5,0	1/1:16,0:16:24.60:634,25,0	1/1:13,0:13:3.01:56,3,0	0/0:26,0:27:0.47:0,0,1	0/0:24,0:24:66.23:0,66,2047	0/0:12,0:12:33.11:0,33,855	0/0:30,0:30:77.86:0,78,2304	1/1:19,0:19:3.01:81,3,0	1/1:18,0:16:18.99:616,19,0	1/1:20,0:20:11.58:230,12,0	./.
chr10	76855450	.	ATG	A	2600.63	PASS	AC=26;AF=0.542;AN=48;BaseQRankSum=9.357;DP=482;FS=1.196;HRun=0;HaplotypeScore=79.8363;InbreedingCoeff=0.7145;MQ=71.15;MQ0=7;MQRankSum=-0.492;QD=11.93;ReadPosRankSum=-0.736;VQSLOD=3.2279;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:2.96:39,3,0	0/0:0,13:13:0.33:0,0,1	0/0:26,0:19:56.93:0,57,1090	0/0:39,0:23:58.83:0,59,1060	./.	./.	1/1:0,12:12:6.02:72,6,0	1/1:0,0:21:60.16:803,60,0	0/0:14,0:14:39.13:0,39,737	1/1:10,0:10:26.07:380,26,0	./.	0/0:14,0:14:39.13:0,39,780	0/0:11,0:11:32.93:0,33,571	1/1:11,0:11:2.94:18,3,0	0/0:10,0:10:0:0,0,0	1/1:1,15:16:2.71:37,3,0	1/1:21,0:21:8.87:56,9,0	1/1:1,0:20:3.01:35,3,0	1/1:0,0:17:45.08:609,45,0	1/1:0,0:12:3.01:40,3,0	0/0:2,25:27:0.47:0,0,1	0/0:23,0:23:66.23:0,66,1327	0/0:12,0:12:33.11:0,33,644	0/0:31,0:31:80.93:0,81,1609	1/1:18,0:18:2.94:18,3,0	1/1:2,1:16:35.64:477,36,0	1/1:0,20:20:14.67:186,15,0	./.
chr10	76855603	.	G	GA	654.81	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.225;DP=601;FS=0.775;HRun=7;HaplotypeScore=63.0746;InbreedingCoeff=0.9968;MQ=84.86;MQ0=0;MQRankSum=0.350;QD=23.39;ReadPosRankSum=0.830;VQSLOD=3.6308;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,985	0/0:10,0:10:27.04:0,27,261	0/0:19,0:19:39.06:0,39,377	0/0:20,0:20:36.06:0,36,406	1/1:2,16:19:42.08:486,42,0	0/0:16,0:16:48.07:0,48,462	0/0:23,0:23:60.09:0,60,579	0/0:33,0:33:81.08:0,81,767	0/0:16,0:16:45.06:0,45,429	0/0:28,0:28:72.11:0,72,695	0/0:15,0:15:39.06:0,39,377	0/0:29,0:29:63.08:0,63,603	0/0:24,0:24:63.09:0,63,608	0/0:15,0:15:39.06:0,39,377	0/0:16,0:16:42.05:0,42,400	0/0:28,0:28:78.12:0,78,753	0/0:27,0:26:66.10:0,66,637	0/0:25,1:26:32.87:0,33,601	0/0:30,0:30:75.10:0,75,716	0/0:15,0:15:36.05:0,36,347	0/0:30,0:30:78.12:0,78,753	0/0:21,0:21:63.09:0,63,602	0/0:8,0:8:24.04:0,24,232	0/0:23,0:23:60.10:0,60,579	1/1:1,8:9:24.07:290,24,0	0/0:25,0:25:69.10:0,69,661	0/0:26,0:26:75.12:0,75,724	0/0:12,0:12:33.05:0,33,319
chr10	76856617	.	T	TAGCATGGGAGAA	60943.91	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-4.370;DP=755;FS=1.239;HRun=0;HaplotypeScore=225.3079;InbreedingCoeff=0.9998;MQ=76.68;MQ0=0;MQRankSum=-21.151;QD=128.03;ReadPosRankSum=-4.002;VQSLOD=4.0474;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:99:0,138,4945	1/1:8,7:17:48.09:2200,48,0	0/0:21,0:21:54.18:0,54,1805	0/0:29,0:28:63.21:0,63,2164	1/1:7,8:16:42.10:1857,42,0	1/1:11,11:26:69.19:3205,69,0	1/1:17,13:34:78.19:3477,78,0	1/1:29,7:40:99:5955,117,0	0/0:34,0:34:99:0,102,3581	1/1:16,15:32:96.33:5614,96,0	1/1:10,11:21:51.17:1900,51,0	0/0:34,0:34:99:0,102,3623	0/0:25,0:25:72.25:0,72,2641	1/1:13,10:27:72.25:3715,72,0	1/1:15,12:28:81.23:3722,81,0	1/1:12,15:29:78.22:4090,78,0	1/1:13,10:27:54.19:2642,54,0	1/1:12,4:19:33.07:1335,33,0	1/1:12,11:24:66.21:3514,66,0	1/1:5,6:11:30.02:1328,30,0	1/1:11,12:25:54.14:2218,54,0	0/0:29,0:29:78.27:0,78,2784	0/0:14,0:14:39.11:0,39,1268	0/0:43,0:43:99:0,129,4139	1/1:11,16:30:81.23:4081,81,0	1/1:13,16:29:81.28:4704,81,0	1/1:8,14:26:60.68:3378,61,0	1/1:4,8:13:36.12:2010,36,0
chr10	76862463	.	AAGAG	A	1069.85	PASS	AB=1.000;AC=35;AF=0.673;AN=52;BaseQRankSum=7.850;DP=553;FS=21.364;HRun=0;HaplotypeScore=121.7755;InbreedingCoeff=0.6191;MQ=66.58;MQ0=9;MQRankSum=-6.825;QD=3.02;ReadPosRankSum=0.944;VQSLOD=1.0852;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:6.01:56,6,0	1/1:10,0:10:6.01:56,6,0	./.	0/0:27,0:19:0:0,0,1	0/0:18,0:18:14.99:0,15,190	1/1:22,0:22:9.90:86,10,0	1/1:19,0:19:6.01:56,6,0	./.	1/1:11,6:18:12.03:167,12,0	1/1:24,0:24:6.01:56,6,0	1/1:23,0:22:0.47:1,0,0	0/0:14,0:16:26.81:0,27,471	0/0:14,0:14:23.71:0,24,295	1/1:17,0:17:6.01:56,6,0	1/1:25,0:25:10.26:87,10,0	1/1:19,0:17:15.12:117,15,0	1/1:29,0:29:12.90:114,13,0	1/1:9,0:9:3:28,3,0	0/0:22,0:22:3.44:0,3,21	1/1:19,0:19:2.11:8,2,0	1/1:16,0:16:2.37:8,2,0	0/0:16,0:16:27.67:0,28,340	0/1:17,0:17:16.89:17,0,120	0/0:22,0:20:24.07:0,24,470	0/0:17,0:18:20.86:0,21,396	1/1:26,0:25:5.30:54,5,0	1/1:27,0:27:18.02:167,18,0	1/1:17,0:17:12.01:111,12,0
chr10	76862498	.	AGAGAGAGAGAGAGCGC	A	7267.14	PASS	AB=0.985;AC=29;AF=0.518;AN=56;BaseQRankSum=10.126;DP=597;FS=30.150;HRun=0;HaplotypeScore=200.3883;InbreedingCoeff=0.5444;MQ=61.70;MQ0=18;MQRankSum=0.397;QD=21.37;ReadPosRankSum=4.099;VQSLOD=2.5081;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:51.13:0,51,1358	1/1:4,9:13:6.02:262,6,0	0/0:23,0:10:24.97:0,25,424	0/0:27,0:11:10.12:0,10,324	0/0:25,0:25:66.69:0,67,1702	1/1:4,17:21:12.04:529,12,0	1/1:5,15:20:6.49:281,6,0	1/1:25,0:25:39.49:767,39,0	0/0:20,0:20:39.12:0,39,1151	1/1:6,18:24:45.47:1048,45,0	1/1:4,16:19:6.02:149,6,0	0/0:22,0:22:60.20:0,60,2590	0/0:18,0:18:42.14:0,42,1758	1/1:7,15:22:6.02:281,6,0	1/1:2,21:23:12.04:532,12,0	1/1:3,15:16:18.06:784,18,0	0/1:26,1:27:3.92:413,0,4	1/1:11,0:10:2.79:41,3,0	0/1:17,0:16:99:239,0,229	1/1:20,0:20:14.97:184,15,0	1/1:13,1:14:3.94:347,4,0	0/0:23,0:23:54.19:0,54,2529	0/0:24,0:24:57.19:0,57,1801	0/0:24,0:21:45.15:0,45,2231	0/0:26,0:25:23.86:0,24,1837	0/1:25,0:24:73.08:580,0,73	0/1:24,1:25:19.88:524,0,20	0/1:15,0:13:99:305,0,125
chr10	76862500	.	AGAGAGAGAGAGCGC	A	7559.90	PASS	AB=0.796;AC=32;AF=0.571;AN=56;BaseQRankSum=9.406;DP=582;FS=14.022;HRun=0;HaplotypeScore=178.1521;InbreedingCoeff=0.7685;MQ=63.11;MQ0=18;MQRankSum=0.291;QD=23.55;ReadPosRankSum=3.533;VQSLOD=3.1174;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:27.17:0,27,1045	1/1:12,0:12:6.02:215,6,0	0/0:23,0:10:24.97:0,25,424	0/0:28,0:12:13.02:0,13,344	0/0:25,0:25:66.68:0,67,1498	1/1:21,0:21:12.04:397,12,0	1/1:19,0:19:6.02:215,6,0	1/1:23,0:23:44.28:820,44,0	0/0:21,0:21:39.13:0,39,995	1/1:22,0:22:46.36:866,46,0	1/1:18,0:16:6.02:97,6,0	0/0:22,0:22:60.20:0,60,2269	0/0:19,0:19:45.15:0,45,1569	1/1:18,0:18:6.02:215,6,0	1/1:22,0:22:12.04:400,12,0	1/1:17,0:15:18.06:586,18,0	1/1:5,23:28:15.05:578,15,0	1/1:11,0:10:3.01:68,3,0	0/1:17,0:16:6.27:343,0,6	1/1:6,11:17:15.05:288,15,0	1/1:14,0:14:24.07:450,24,0	0/0:23,0:23:54.19:0,54,2181	0/0:24,0:24:57.19:0,57,1547	0/0:25,0:22:48.16:0,48,2024	0/0:26,0:25:23.86:0,24,1555	1/1:5,16:20:34.51:797,35,0	1/1:6,19:25:18.06:740,18,0	0/1:5,11:14:21.57:488,0,22
chr10	76862502	.	AGAGAGAGAGCGC	A	6721.28	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=10.377;DP=554;FS=15.745;HRun=0;HaplotypeScore=157.8503;InbreedingCoeff=0.8401;MQ=66.55;MQ0=16;MQRankSum=-0.059;QD=23.18;ReadPosRankSum=3.675;VQSLOD=3.1767;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:44.59:0,45,800	1/1:10,0:10:6.02:187,6,0	0/0:24,0:11:27.56:0,28,487	0/0:29,0:14:18.99:0,19,402	0/0:25,0:25:66.66:0,67,1277	1/1:18,0:18:12.04:341,12,0	1/1:16,0:16:6.02:187,6,0	1/1:21,0:21:48.49:875,48,0	0/0:21,0:21:36.12:0,36,738	1/1:20,0:20:47.07:834,47,0	1/1:17,0:15:6.02:82,6,0	0/0:23,0:23:63.13:0,63,1946	0/0:18,0:18:45.15:0,45,1343	1/1:15,0:15:6.02:187,6,0	1/1:21,0:21:12.04:344,12,0	1/1:17,0:15:18.06:502,18,0	1/1:25,0:25:15.05:433,15,0	1/1:2,9:10:3.01:113,3,0	0/1:15,0:15:5.26:290,0,5	1/1:14,0:14:15.05:224,15,0	1/1:14,0:14:27.56:459,28,0	0/0:24,0:24:57.18:0,57,1852	0/0:24,0:24:57.19:0,57,1326	0/0:24,0:21:48.16:0,48,1722	0/0:27,0:26:20.68:0,21,1269	1/1:19,0:18:36.77:728,37,0	1/1:21,0:21:18.06:561,18,0	1/1:16,0:14:12.04:374,12,0
chr10	76862510	.	AGCGC	A	4934.23	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=10.370;DP=529;FS=2.920;HRun=0;HaplotypeScore=103.1985;InbreedingCoeff=0.8421;MQ=70.45;MQ0=13;MQRankSum=-0.633;QD=16.39;ReadPosRankSum=1.801;VQSLOD=4.4279;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:47.46:0,47,564	1/1:10,0:10:6.02:75,6,0	0/0:26,0:13:30.07:0,30,542	0/0:29,0:15:23.65:0,24,437	0/0:25,0:25:9.67:0,10,719	1/1:18,0:18:12.04:149,12,0	1/1:15,0:15:6.02:75,6,0	1/1:3,22:25:64.15:1064,64,0	0/0:19,0:19:20.98:0,21,411	1/1:20,0:20:48.63:780,49,0	1/1:17,0:15:6.02:71,6,0	0/0:22,0:22:57.03:0,57,928	0/0:20,0:20:23.15:0,23,735	1/1:15,0:15:6.02:75,6,0	1/1:21,0:21:12.04:148,12,0	1/1:16,0:15:18.06:222,18,0	1/1:24,0:24:15.05:188,15,0	1/1:10,0:9:3.01:38,3,0	1/1:1,7:8:21.07:326,21,0	1/1:12,0:12:15.05:189,15,0	1/1:14,0:14:33.11:532,33,0	0/0:21,0:21:51.13:0,51,844	0/0:22,0:22:51.64:0,52,808	0/0:22,0:21:47.16:0,47,832	0/1:26,0:25:1.83:2,0,364	1/1:17,0:16:39.13:624,39,0	1/1:20,0:20:17.59:226,18,0	1/1:13,0:11:12.04:151,12,0
chr10	76864701	.	GA	G	11123.85	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=8.921;DP=643;FS=9.808;HRun=9;HaplotypeScore=86.9005;InbreedingCoeff=0.9561;MQ=81.72;MQ0=0;MQRankSum=-0.409;QD=22.98;ReadPosRankSum=3.911;VQSLOD=5.1536;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:35:70.32:801,70,0	1/1:0,9:9:24.01:220,24,0	0/0:21,1:22:33.92:0,34,369	0/0:18,0:18:10.56:0,11,162	1/1:3,20:23:56.97:513,57,0	1/1:1,23:24:69.04:631,69,0	1/1:3,27:30:69.03:631,69,0	1/1:1,18:19:51:458,51,0	0/0:17,0:17:51.14:0,51,579	1/1:1,26:27:78.03:710,78,0	1/1:4,11:15:1.39:267,1,0	0/0:24,0:24:69.18:0,69,778	0/0:21,0:21:63.18:0,63,719	1/1:3,24:27:72.04:659,72,0	1/1:3,31:34:75.04:686,75,0	1/1:2,23:25:57.03:522,57,0	1/1:3,33:38:90.99:808,91,0	1/1:2,24:26:63.03:576,63,0	1/1:2,22:24:65.92:570,66,0	1/1:0,13:13:39.02:357,39,0	1/1:2,35:37:96.52:880,97,0	0/0:18,0:19:53.92:0,54,568	0/0:14,0:14:36.10:0,36,407	0/0:23,0:23:51.14:0,51,577	1/1:1,12:13:30.01:275,30,0	1/1:4,26:30:81.04:739,81,0	1/1:2,23:25:60.03:548,60,0	1/1:0,10:10:30.02:275,30,0
chr10	76865018	.	GTT	G	4203.85	PASS	AB=0.676;AC=33;AF=0.589;AN=56;BaseQRankSum=-0.326;DP=595;FS=0.000;HRun=15;HaplotypeScore=92.7627;InbreedingCoeff=0.7040;MQ=75.29;MQ0=3;MQRankSum=-0.755;QD=12.22;ReadPosRankSum=2.634;VQSLOD=2.9147;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:48:99:0,115,1185	1/1:4,3:7:8.84:79,9,0	0/0:29,0:19:15.78:0,16,208	0/0:22,0:18:0.68:0,1,58	0/0:20,0:34:33.84:0,34,293	1/1:6,15:23:41.40:339,41,0	1/1:4,8:13:23.74:198,24,0	0/1:8,18:29:19.39:391,0,19	0/0:18,0:21:56.34:0,56,628	1/1:3,11:15:29.39:279,29,0	1/1:8,10:19:3.11:202,3,0	0/0:15,0:15:32.62:0,33,405	0/0:15,0:17:38.89:0,39,454	0/1:12,7:20:28.87:104,0,29	1/1:11,7:18:22.42:199,22,0	1/1:8,8:16:26.66:267,27,0	1/1:13,21:38:49.72:571,50,0	1/1:8,3:16:29.08:211,29,0	1/1:15,10:25:18.85:199,19,0	1/1:8,8:20:7.58:207,8,0	1/1:4,4:8:11.93:105,12,0	0/0:21,0:22:53.57:0,54,631	0/0:15,1:18:22.74:0,23,510	0/0:20,0:24:51.95:0,52,619	0/1:7,1:11:6.30:6,0,114	1/1:10,13:24:41.53:354,42,0	1/1:13,5:21:11.90:212,12,0	1/1:6,10:21:26.30:278,26,0
chr10	76866745	.	T	TA	2600.31	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-10.530;DP=730;FS=0.000;HRun=2;HaplotypeScore=67.1303;InbreedingCoeff=1.0000;MQ=84.21;MQ0=0;MQRankSum=-2.428;QD=39.40;ReadPosRankSum=2.480;VQSLOD=4.1342;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.20:0,63,780	0/0:14,0:14:42.13:0,42,521	0/0:26,0:26:49.60:0,50,841	0/0:17,0:17:43.92:0,44,501	1/1:0,40:40:99:1685,117,0	0/0:24,0:24:72.21:0,72,879	0/0:20,0:20:57.18:0,57,707	0/0:30,0:30:84.26:0,84,1030	0/0:30,0:30:84.26:0,84,1041	0/0:38,0:38:99:0,114,1392	0/0:26,0:26:69.22:0,69,855	0/0:35,0:35:99:0,102,1237	0/0:28,0:28:78.24:0,78,967	0/0:21,0:21:63.19:0,63,769	0/0:22,0:22:66.19:0,66,806	0/0:28,0:28:78.22:0,78,942	0/0:29,0:29:84.26:0,84,1041	0/0:25,0:25:69.12:0,69,837	0/0:19,0:19:57.17:0,57,696	0/0:31,0:31:90.23:0,90,1085	0/0:24,0:24:69.22:0,69,855	0/0:30,0:30:87.27:0,87,1079	0/0:27,0:27:81.25:0,81,1004	0/0:22,0:22:60.19:0,60,744	1/1:2,24:26:72.24:1037,72,0	0/0:20,0:20:51.15:0,51,622	0/0:36,0:36:99:0,108,1339	0/0:19,0:19:54.17:0,54,669
chr10	76870230	.	T	TTTG	13176.04	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-13.662;DP=771;FS=3.222;HRun=0;HaplotypeScore=101.8802;InbreedingCoeff=0.9366;MQ=71.71;MQ0=4;MQRankSum=0.797;QD=27.06;ReadPosRankSum=-0.319;VQSLOD=4.9717;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:46:87.21:0,87,1115	1/1:3,8:11:21.07:409,21,0	1/1:28,0:18:2.68:11,3,0	0/0:25,0:20:0:0,0,0	0/0:24,0:25:36.08:0,36,465	1/1:13,12:25:30.10:584,30,0	1/1:10,14:24:9.66:671,10,0	1/1:21,8:29:24.08:439,24,0	0/0:21,0:21:36.11:0,36,470	1/1:24,19:45:63.22:1197,63,0	1/1:9,10:19:24.08:467,24,0	0/0:32,0:32:69.21:0,69,900	0/0:33,0:33:57.14:0,57,718	1/1:10,22:34:66.23:1263,66,0	1/1:13,15:28:42.14:818,42,0	1/1:15,23:39:22.85:1126,23,0	1/1:7,12:19:27.09:525,27,0	1/1:6,20:26:45.15:876,45,0	1/1:10,7:17:21.07:395,21,0	1/1:8,15:24:42.14:813,42,0	1/1:18,24:44:66.23:1283,66,0	0/0:30,0:30:60.16:0,60,764	0/0:16,0:16:42.12:0,42,546	0/0:29,0:29:57.19:0,57,767	0/0:27,0:27:51.17:0,51,684	1/1:14,23:38:57.70:1317,58,0	1/1:14,11:25:30.10:573,30,0	1/1:5,7:12:21.07:409,21,0
chr10	76874482	.	C	CA	366.45	PASS	AB=0.850;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.600;DP=584;FS=0.000;HRun=13;HaplotypeScore=77.7563;InbreedingCoeff=0.4744;MQ=78.44;MQ0=1;MQRankSum=-1.757;QD=7.97;ReadPosRankSum=-1.922;VQSLOD=2.3170;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,23:29:34.37:455,34,0	0/0:9,0:9:20.79:0,21,144	0/0:18,0:16:11.39:0,11,65	0/1:14,2:14:15.93:16,0,38	0/0:30,0:30:32.37:0,32,226	0/0:29,0:29:56.35:0,56,390	0/0:19,0:21:4.01:0,4,130	0/0:29,1:31:58.44:0,58,393	0/0:15,0:15:34.64:0,35,232	0/0:24,1:26:52.57:0,53,355	0/0:16,0:16:35.65:0,36,247	0/0:17,0:18:24.67:0,25,165	0/0:14,0:14:7.77:0,8,58	0/0:4,0:4:8.90:0,9,62	0/0:16,0:16:22.72:0,23,161	0/0:17,0:19:21.79:0,22,255	0/0:30,3:34:48.41:0,48,468	0/0:24,0:24:41.44:0,41,287	0/0:16,2:20:5.53:0,6,129	0/0:29,1:33:37.65:0,38,380	0/0:26,0:28:60.47:0,60,402	0/0:20,0:20:19.85:0,20,210	0/0:15,0:15:23.74:0,24,162	0/0:17,0:20:37.59:0,38,252	0/0:20,0:22:32.97:0,33,292	0/0:31,0:32:55.42:0,55,376	0/0:17,0:16:11.85:0,12,202	0/0:7,0:7:20.83:0,21,144
chr10	76875301	.	C	CTG	292.58	PASS	AB=0.974;AC=11;AF=0.204;AN=54;BaseQRankSum=-1.084;DP=639;FS=2.239;HRun=0;HaplotypeScore=109.0503;InbreedingCoeff=0.3151;MQ=69.66;MQ0=5;MQRankSum=-0.712;QD=1.70;ReadPosRankSum=0.925;VQSLOD=2.2996;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,1:32:17.99:179,18,0	0/0:7,0:7:2.62:0,3,14	./.	0/0:32,0:21:0.89:0,1,2	0/1:24,0:24:32.93:66,0,33	0/0:22,0:22:2.90:0,3,16	0/0:25,0:25:5.68:0,6,28	1/1:22,0:22:0.03:0,0,0	0/1:19,2:22:9.24:9,0,248	0/0:22,0:22:20.67:0,21,139	0/1:13,0:13:0:0,0,0	0/0:23,0:22:20.79:0,21,180	0/0:25,0:26:44.18:0,44,337	0/0:24,0:24:37.66:0,38,239	0/0:20,0:20:29.67:0,30,221	0/0:24,0:24:14.35:0,14,79	0/0:30,0:30:8.82:0,9,62	0/0:27,0:27:14.35:0,14,79	0/0:17,0:17:11.39:0,11,60	0/1:16,0:16:0:0,0,1	0/0:47,0:47:11.58:0,12,68	0/1:19,1:20:20.43:20,0,157	0/0:11,0:14:8.97:0,9,78	0/0:36,1:36:12.09:0,12,432	1/1:19,1:20:6.44:142,6,0	0/0:16,0:16:0.64:0,1,44	0/0:18,0:19:14.14:0,14,79	0/0:8,0:8:2.97:0,3,21
chr10	76875338	.	TGTGA	T	3233.06	PASS	AB=0.738;AC=31;AF=0.554;AN=56;BaseQRankSum=-0.052;DP=645;FS=5.353;HRun=0;HaplotypeScore=101.4051;InbreedingCoeff=0.2386;MQ=58.30;MQ0=16;MQRankSum=1.745;QD=7.40;ReadPosRankSum=-0.031;VQSLOD=2.0504;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:38:99:172,0,262	0/1:1,9:10:18.50:51,0,18	0/0:31,0:15:38.57:0,39,329	0/0:30,0:12:4.42:0,4,242	0/1:18,0:18:76.82:77,0,205	1/1:1,18:19:3.01:55,3,0	1/1:2,23:25:5.78:118,6,0	1/1:17,0:16:39.01:349,39,0	0/0:26,0:26:24.55:0,25,864	1/1:3,14:17:39.50:412,39,0	1/1:2,14:16:0.47:1,0,0	0/0:22,0:21:28.38:0,28,726	0/0:26,0:26:48.27:0,48,774	1/1:19,3:22:53.22:514,53,0	0/1:30,1:30:77.67:91,0,78	1/1:2,18:20:14.88:262,15,0	0/1:5,22:27:39.14:49,0,39	0/1:3,24:27:4.22:217,0,4	1/1:3,6:9:14.82:179,15,0	1/1:3,15:18:2.90:19,3,0	0/1:5,48:52:31.90:178,0,32	0/0:19,0:19:29.28:0,29,529	0/0:17,0:17:11.07:0,11,380	0/0:37,0:36:67.24:0,67,1143	0/1:24,0:24:52.43:52,0,289	1/1:8,10:18:27.12:367,27,0	0/1:3,15:18:9.17:183,0,9	1/1:8,0:7:1.80:72,2,0
chr10	76875340	.	TGA	T	2217.62	PASS	AB=0.995;AC=36;AF=0.643;AN=56;BaseQRankSum=2.892;DP=643;FS=4.706;HRun=0;HaplotypeScore=92.7073;InbreedingCoeff=0.2878;MQ=60.44;MQ0=16;MQRankSum=0.406;QD=4.65;ReadPosRankSum=1.894;VQSLOD=2.0557;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:38:3.47:255,3,0	0/1:10,0:10:18.12:18,0,19	0/0:32,0:18:41.45:0,41,381	0/0:33,0:15:13.11:0,13,324	0/1:18,0:18:19.65:90,0,20	1/1:19,0:19:2.98:22,3,0	1/1:25,0:25:5.97:52,6,0	1/1:18,0:16:42.02:379,42,0	0/0:24,0:24:42.34:0,42,524	1/1:17,0:17:24.63:199,25,0	1/1:15,0:15:0.47:1,0,0	0/1:22,0:21:9.86:10,0,442	0/1:25,1:26:39.88:40,0,280	1/1:22,0:22:26.24:196,26,0	1/1:11,18:29:14.86:138,15,0	1/1:20,0:20:14.99:130,15,0	0/1:27,0:27:13.98:20,0,14	1/1:26,1:27:5.03:126,5,0	1/1:9,0:9:8.94:76,9,0	0/1:16,0:16:0.08:0,0,0	0/1:53,0:52:10:82,0,10	0/0:17,3:20:3:0,3,325	0/0:17,0:17:5.12:0,5,231	0/0:36,3:38:23.90:0,24,575	0/1:22,0:22:32.94:113,0,33	1/1:18,0:18:35.95:303,36,0	1/1:18,0:18:11.04:85,11,0	1/1:5,0:4:8.73:59,9,0
chr10	76879028	.	T	TG	14660.99	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-17.152;DP=738;FS=2.767;HRun=5;HaplotypeScore=63.9645;InbreedingCoeff=0.9993;MQ=79.01;MQ0=0;MQRankSum=-2.630;QD=33.78;ReadPosRankSum=0.904;VQSLOD=5.2712;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,156,1675	1/1:2,10:12:33.10:422,33,0	0/0:21,0:21:54.05:0,54,565	0/0:12,0:12:33.06:0,33,337	0/0:20,0:20:57.14:0,57,610	1/1:2,19:21:48.16:632,48,0	1/1:3,26:29:69.22:908,69,0	1/1:7,24:31:72.22:931,72,0	0/0:27,0:27:72.18:0,72,773	1/1:2,29:31:93.28:1197,93,0	1/1:1,8:9:21.07:275,21,0	0/0:35,0:35:99:0,102,1095	0/0:25,0:25:72.17:0,72,766	1/1:5,19:24:60.19:781,60,0	1/1:3,27:30:81.26:1055,81,0	1/1:5,26:31:72.23:947,72,0	1/1:1,24:25:72.23:947,72,0	1/1:4,32:36:87.28:1145,87,0	1/1:2,14:16:42.12:533,42,0	1/1:1,21:22:60.15:765,60,0	1/1:2,36:38:99:1381,105,0	0/0:28,0:28:78.19:0,78,837	0/0:20,0:20:54.10:0,54,564	0/0:31,0:31:87.19:0,87,925	0/0:30,0:30:78.17:0,78,824	1/1:4,28:32:81.25:1049,81,0	1/1:6,27:33:87.28:1141,87,0	1/1:0,14:14:42.14:553,42,0
chr10	76880553	.	G	GAA	7232.54	PASS	AB=0.944;AC=40;AF=0.714;AN=56;BaseQRankSum=-3.400;DP=461;FS=0.000;HRun=13;HaplotypeScore=78.4179;InbreedingCoeff=0.6838;MQ=69.66;MQ0=1;MQRankSum=-1.887;QD=18.59;ReadPosRankSum=-2.128;VQSLOD=3.6757;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,13:21:17.51:493,18,0	1/1:6,8:16:26.51:294,27,0	0/1:24,0:20:1.63:2,0,127	0/1:12,0:11:11.79:12,0,25	0/1:18,1:21:8.22:8,0,261	1/1:1,8:10:24.07:314,24,0	1/1:1,8:11:29.54:342,30,0	1/1:14,13:27:49.90:609,50,0	0/0:11,0:12:20.51:0,21,159	1/1:2,7:12:4.12:312,4,0	1/1:1,9:13:32.02:338,32,0	0/0:17,0:17:32.79:0,33,290	0/0:10,0:11:23.61:0,24,193	1/1:4,15:20:35.50:414,35,0	1/1:3,3:14:21.04:236,21,0	1/1:3,13:18:32.08:384,32,0	1/1:0,22:24:53.66:699,54,0	1/1:1,20:23:39.09:509,39,0	1/1:7,10:20:31.43:421,31,0	1/1:3,7:17:35.45:379,35,0	1/1:3,12:16:30.09:395,30,0	0/0:11,0:11:20.92:0,21,180	0/0:11,0:12:17.71:0,18,195	0/1:15,1:18:5.20:5,0,285	0/0:9,0:9:7.13:0,7,72	1/1:8,7:17:23.56:280,24,0	1/1:4,20:26:50.64:626,51,0	1/1:4,3:7:12.04:162,12,0
chr10	76882672	.	GAC	G	1009.95	PASS	AB=0.855;AC=7;AF=0.130;AN=54;BaseQRankSum=2.682;DP=597;FS=7.115;HRun=0;HaplotypeScore=120.8428;InbreedingCoeff=0.2107;MQ=64.71;MQ0=8;MQRankSum=3.861;QD=7.83;ReadPosRankSum=2.067;VQSLOD=2.9599;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,4:33:67.68:68,0,508	0/0:7,0:7:3.01:0,3,34	0/0:29,0:21:3.01:0,3,46	0/0:22,0:16:2.27:0,2,45	1/1:11,17:27:39.11:444,39,0	0/0:13,0:14:3:0,3,26	0/0:35,0:35:11.90:0,12,121	0/0:31,0:31:51.56:0,52,585	0/0:16,0:16:27.09:0,27,416	0/0:20,0:24:47.16:0,47,510	0/0:23,0:22:3:0,3,25	0/0:20,1:21:1.93:0,2,474	0/1:20,5:25:51.39:51,0,588	0/0:13,0:16:2.69:0,3,26	0/0:13,0:18:6:0,6,51	0/0:12,0:13:3:0,3,26	0/0:17,0:18:15.45:0,15,143	0/0:20,0:22:27.05:0,27,339	0/0:12,0:12:24.07:0,24,306	./.	0/0:22,0:22:2.70:0,3,26	0/0:18,1:19:13.92:0,14,589	0/1:16,3:19:60.47:60,0,420	0/0:24,0:22:51.15:0,51,761	1/1:4,16:24:50.64:521,51,0	0/0:27,0:27:55.44:0,55,653	0/0:16,0:19:12.02:0,12,130	0/0:6,0:9:3:0,3,26
chr10	76883684	.	A	ATC	2196.07	PASS	AB=0.826;AC=30;AF=0.625;AN=48;BaseQRankSum=-0.749;DP=547;FS=7.594;HRun=0;HaplotypeScore=91.7966;InbreedingCoeff=0.2853;MQ=62.26;MQ0=9;MQRankSum=0.699;QD=6.13;ReadPosRankSum=-0.626;VQSLOD=2.2852;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:28:8.43:0,8,40	1/1:8,0:8:12.01:133,12,0	./.	./.	1/1:31,0:31:3.01:43,3,0	1/1:23,0:23:20.98:208,21,0	1/1:10,0:19:12:105,12,0	1/1:19,0:19:0.47:1,0,0	0/0:16,0:15:14.03:0,14,117	1/1:14,0:14:9.49:88,9,0	1/1:14,0:14:2.68:11,3,0	0/0:17,0:17:11.84:0,12,102	0/0:11,0:11:2.98:0,3,23	0/1:18,9:27:59.73:197,0,60	0/1:15,7:24:23.30:80,0,23	0/1:14,6:20:22.89:61,0,23	1/1:16,4:20:0.35:367,0,0	1/1:11,0:11:23.99:241,24,0	1/1:27,0:24:9.45:79,9,0	./.	1/1:22,0:22:26.98:247,27,0	1/1:19,1:19:9:94,9,0	0/0:12,0:12:3:0,3,32	0/0:31,0:33:30.62:0,31,458	./.	0/1:10,5:17:12.73:103,0,13	0/1:23,0:23:10.12:195,0,10	0/1:19,0:18:1.07:100,0,1
chr10	76883942	.	CGT	C	1357.71	PASS	AB=0.936;AC=34;AF=0.654;AN=52;BaseQRankSum=5.269;DP=612;FS=6.097;HRun=0;HaplotypeScore=76.5057;InbreedingCoeff=0.3203;MQ=64.88;MQ0=14;MQRankSum=0.300;QD=3.26;ReadPosRankSum=-0.567;VQSLOD=1.4161;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:24:5.83:38,6,0	1/1:6,3:10:8.86:79,9,0	0/0:38,0:21:0.47:0,0,1	./.	0/0:23,0:23:12.02:0,12,139	1/1:12,13:26:26.73:255,27,0	1/1:17,8:28:17.54:139,18,0	0/0:27,0:26:0.89:0,1,2	0/1:12,2:14:46.77:47,0,136	0/0:12,0:16:16.27:0,16,157	0/1:9,0:12:0:0,0,0	0/1:26,2:27:5.33:5,0,313	0/1:16,0:16:17.34:17,0,161	1/1:8,0:8:3.01:32,3,0	1/1:10,4:16:14.70:125,15,0	1/1:13,5:21:20.72:190,21,0	1/1:17,10:28:4.79:230,5,0	1/1:20,5:25:11.70:93,12,0	1/1:22,0:23:2.84:14,3,0	1/1:10,0:13:5.68:28,6,0	1/1:43,0:53:8.19:42,8,0	0/0:11,0:11:15.05:0,15,211	0/1:13,2:15:52.79:53,0,77	0/1:29,1:36:16.45:16,0,287	0/0:14,0:14:9.02:0,9,113	./.	1/1:7,0:8:2.84:14,3,0	1/1:5,4:9:9.02:97,9,0
chr10	76889480	.	G	GAA	9849.49	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=0.710;DP=533;FS=0.383;HRun=10;HaplotypeScore=86.2018;InbreedingCoeff=0.9690;MQ=73.95;MQ0=3;MQRankSum=-0.090;QD=28.38;ReadPosRankSum=-1.119;VQSLOD=4.7974;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:19:56.87:0,57,561	1/1:1,8:10:26.53:341,27,0	0/0:18,0:18:29.76:0,30,281	0/0:9,0:9:1.30:0,1,8	0/0:26,0:26:63.03:0,63,621	1/1:3,18:22:53.67:769,54,0	1/1:1,13:16:35.60:485,36,0	1/1:8,20:31:66.04:887,66,0	0/0:21,0:22:53.81:0,54,529	1/1:3,19:25:62.37:810,62,0	1/1:4,12:17:42.09:574,42,0	0/0:12,0:12:21.03:0,21,264	0/0:11,0:11:29.93:0,30,289	1/1:4,14:20:36.12:521,36,0	1/1:2,18:23:44.12:583,44,0	1/1:2,17:19:35.61:501,36,0	1/1:4,18:24:47.13:644,47,0	1/1:3,13:18:31.96:420,32,0	1/1:5,18:27:71.12:900,71,0	1/1:2,11:14:32.60:447,33,0	1/1:1,16:17:33.11:475,33,0	0/0:17,0:18:38.80:0,39,448	0/0:13,0:13:27.03:0,27,274	0/0:20,0:20:41.93:0,42,431	0/0:16,0:16:45.05:0,45,440	1/1:4,15:20:45.11:612,45,0	1/1:7,13:23:38.61:523,39,0	1/1:3,15:18:24.08:358,24,0
chr10	76889850	.	CG	C	1092.64	PASS	AB=0.961;AC=34;AF=0.607;AN=56;BaseQRankSum=5.434;DP=404;FS=22.565;HRun=10;HaplotypeScore=96.5902;InbreedingCoeff=0.5568;MQ=68.11;MQ0=11;MQRankSum=-6.785;QD=4.20;ReadPosRankSum=5.644;VQSLOD=0.0589;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:27.32:0,27,269	1/1:3,0:3:8.33:51,8,0	0/0:33,1:19:29.04:0,29,216	0/1:39,0:16:3.34:3,0,92	0/0:11,0:14:18.01:0,18,175	1/1:10,1:10:16.40:84,16,0	1/1:17,0:14:31.19:175,31,0	0/1:10,0:10:1.12:36,0,1	0/0:17,0:17:2.90:0,3,210	1/1:11,1:12:10.81:53,11,0	1/1:8,0:8:2.12:21,2,0	0/0:13,0:13:9:0,9,84	0/0:11,0:11:20.93:0,21,181	0/1:10,1:10:14.65:19,0,15	1/1:20,0:18:13.97:110,14,0	1/1:15,1:15:22.33:131,22,0	1/1:16,2:17:24.43:144,24,0	1/1:12,0:11:17.18:121,17,0	1/1:12,1:11:11.51:68,12,0	1/1:6,0:7:2.72:12,3,0	1/1:12,1:11:2.99:26,3,0	0/0:6,0:6:3.01:0,3,34	0/1:11,1:13:8.05:8,0,116	0/0:15,0:15:27:0,27,261	0/0:5,0:5:3.01:0,3,33	1/1:16,0:16:15.91:90,16,0	1/1:14,1:16:20.53:114,21,0	1/1:3,0:3:2.80:13,3,0
chr10	76889859	.	G	GA	3853.59	PASS	AB=0.955;AC=34;AF=0.607;AN=56;BaseQRankSum=8.333;DP=368;FS=8.542;HRun=0;HaplotypeScore=77.9797;InbreedingCoeff=0.8376;MQ=59.24;MQ0=13;MQRankSum=-8.083;QD=16.75;ReadPosRankSum=3.116;VQSLOD=5.5459;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:42.41:0,42,434	1/1:2,3:5:14.99:156,15,0	0/0:34,0:16:28.92:0,29,205	0/1:38,0:11:0.68:1,0,92	0/0:14,0:14:28.27:0,28,282	1/1:3,7:9:21.04:237,21,0	1/1:3,13:14:39.05:476,39,0	1/1:9,2:11:12.69:157,13,0	0/0:13,0:13:28.60:0,29,292	1/1:11,4:15:29.86:283,30,0	1/1:8,2:10:8.46:79,8,0	0/0:9,0:9:18.01:0,18,171	0/0:12,0:12:29.52:0,30,241	1/1:8,1:8:7.22:56,7,0	1/1:10,10:18:35.84:377,36,0	1/1:6,7:12:28.84:303,29,0	1/1:6,11:16:40.94:441,41,0	1/1:4,5:8:17.69:172,18,0	1/1:7,5:10:23.78:218,24,0	1/1:3,0:3:8.92:69,9,0	0/1:9,1:10:1.63:33,0,2	0/0:3,0:3:3.01:0,3,42	0/0:13,0:13:28.45:0,28,221	0/0:17,0:17:41.97:0,42,424	0/0:3,0:3:8.95:0,9,82	1/1:6,7:13:35.86:368,36,0	1/1:8,6:12:32.63:324,33,0	1/1:5,0:5:11.81:105,12,0
chr10	76889868	.	G	GAGAGA	8789.65	PASS	AB=0.600;AC=33;AF=0.589;AN=56;BaseQRankSum=2.430;DP=402;FS=10.623;HRun=0;HaplotypeScore=81.4731;InbreedingCoeff=0.8437;MQ=57.51;MQ0=9;MQRankSum=-9.169;QD=40.32;ReadPosRankSum=1.164;VQSLOD=4.2688;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.15:0,45,873	1/1:0,0:5:14.67:256,15,0	0/0:30,0:12:21.06:0,21,275	0/0:41,0:15:11.58:0,12,167	0/0:18,0:18:39.12:0,39,726	1/1:2,0:11:20.43:451,20,0	1/1:0,1:16:38.92:856,39,0	1/1:3,0:16:32.98:533,33,0	0/0:16,0:16:36.06:0,36,649	1/1:2,9:17:45.15:1064,45,0	1/1:1,1:13:8.82:184,9,0	0/0:8,0:9:18.06:0,18,379	0/0:12,0:12:24.08:0,24,476	1/1:2,8:10:6.02:187,6,0	1/1:3,11:21:35.67:759,36,0	1/1:3,2:12:33.06:738,33,0	1/1:4,0:17:39.13:984,39,0	1/1:3,1:10:11.80:193,12,0	1/1:7,0:12:30.10:679,30,0	1/1:5,0:5:12.02:224,12,0	1/1:1,7:10:5.81:101,6,0	0/0:3,0:3:2.99:0,3,64	0/0:13,0:13:33.11:0,33,621	0/0:20,0:20:51.17:0,51,973	0/0:3,0:3:9.03:0,9,189	1/1:1,1:15:39.12:813,39,0	1/1:1,3:12:24.07:605,24,0	0/1:2,3:6:9:162,0,9
chr10	76890440	.	G	GA	3783.82	PASS	AB=0.933;AC=37;AF=0.661;AN=56;BaseQRankSum=-0.491;DP=576;FS=0.440;HRun=14;HaplotypeScore=103.6045;InbreedingCoeff=0.4874;MQ=71.48;MQ0=0;MQRankSum=-0.741;QD=8.62;ReadPosRankSum=-4.990;VQSLOD=1.4700;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,1:19:26.42:0,26,76	0/1:7,3:11:17.68:99,0,18	1/1:16,0:14:4.42:39,4,0	0/0:13,0:10:11.70:0,12,68	0/0:25,0:27:9.42:0,9,191	1/1:16,2:21:11:186,11,0	1/1:14,7:23:5.96:257,6,0	1/1:14,17:31:29.31:336,29,0	0/0:17,0:17:20.37:0,20,133	1/1:14,18:32:25.67:324,26,0	1/1:10,16:27:10.81:292,11,0	0/1:20,0:20:7.12:7,0,106	0/1:21,0:21:39.06:39,0,120	1/1:3,14:17:15.88:134,16,0	1/1:5,11:16:2.62:141,3,0	1/1:12,14:26:19.60:283,20,0	1/1:20,7:29:42.74:378,43,0	1/1:11,3:14:2.25:131,2,0	0/1:13,1:14:6.46:59,0,6	1/1:9,12:21:2.72:238,3,0	1/1:3,10:13:5.98:48,6,0	0/0:23,0:23:23.27:0,23,153	0/1:27,0:29:6:6,0,175	0/0:10,0:10:14.67:0,15,96	0/0:28,0:28:35.06:0,35,230	1/1:13,4:17:24.73:167,25,0	1/1:22,10:32:70.92:567,71,0	1/1:5,1:5:7.81:52,8,0
chr10	76890493	.	C	CCT	1198.51	PASS	AB=0.705;AC=19;AF=0.339;AN=56;BaseQRankSum=6.606;DP=556;FS=17.658;HRun=0;HaplotypeScore=116.0716;InbreedingCoeff=-0.3614;MQ=74.21;MQ0=2;MQRankSum=-1.142;QD=3.29;ReadPosRankSum=-1.031;VQSLOD=0.8761;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:20:47.83:48,0,219	0/1:3,0:15:55.81:68,0,56	0/0:23,0:18:24.13:0,24,280	0/0:15,0:7:15.76:0,16,157	0/0:11,0:33:33.38:0,33,347	0/1:7,0:21:47.11:47,0,72	0/1:9,0:21:66.37:66,0,117	0/1:20,0:28:65.42:65,0,329	0/0:15,0:17:44.86:0,45,488	0/1:20,0:24:19.71:20,0,255	0/1:10,0:16:32.98:64,0,33	0/0:19,0:19:50.82:0,51,637	0/0:10,0:10:26.98:0,27,297	0/1:15,0:18:82.68:86,0,83	0/1:17,0:21:80.11:115,0,80	0/1:17,0:22:68.41:84,0,68	0/1:8,1:25:99:111,0,106	0/1:4,0:15:42.37:42,0,46	0/1:12,0:29:99:113,0,232	0/1:20,0:27:64.20:64,0,185	0/1:7,0:10:51.89:52,0,55	0/0:21,0:21:60.08:0,60,845	0/0:26,0:26:62.90:0,63,942	0/0:14,0:16:44.84:0,45,563	0/0:5,0:12:25.85:0,26,168	0/1:4,0:18:71.97:129,0,72	0/1:12,0:28:99:121,0,116	1/1:1,0:6:12.45:69,12,0
chr10	76891805	.	T	TACACAC	4254.01	PASS	AB=0.920;AC=32;AF=0.667;AN=48;BaseQRankSum=-1.106;DP=723;FS=15.392;HRun=0;HaplotypeScore=170.6462;InbreedingCoeff=0.5365;MQ=62.66;MQ0=13;MQRankSum=-3.444;QD=9.80;ReadPosRankSum=-3.490;VQSLOD=2.4509;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:48.02:0,48,1112	1/1:9,0:9:12.03:186,12,0	./.	./.	0/1:5,0:19:16.34:16,0,35	1/1:24,0:24:12.47:108,12,0	1/1:26,0:39:4.87:35,5,0	1/1:27,0:26:22.14:185,22,0	0/0:23,0:23:14.08:0,14,394	1/1:25,0:24:44.99:650,45,0	1/1:11,0:11:6.02:123,6,0	0/1:25,0:26:13.30:13,0,514	0/0:24,0:26:8.64:0,9,592	./.	1/1:13,16:38:6.71:55,7,0	1/1:9,0:26:9.03:223,9,0	1/1:10,9:23:9.03:217,9,0	1/1:22,2:26:30:706,30,0	1/1:20,0:19:18.48:273,18,0	1/1:5,8:16:5.26:122,5,0	1/1:36,0:36:24.02:388,24,0	0/1:18,0:17:3.43:3,0,218	0/0:14,0:14:21.07:0,21,356	0/0:37,0:39:19.21:0,19,808	0/0:8,0:16:8.63:0,9,125	1/1:29,0:28:38.98:705,39,0	0/1:9,6:19:26.91:246,0,27	./.
chr10	76892805	.	GGAACA	G	21162.81	PASS	AB=0.508;AC=33;AF=0.589;AN=56;BaseQRankSum=17.562;DP=732;FS=0.000;HRun=0;HaplotypeScore=146.4976;InbreedingCoeff=0.9277;MQ=81.06;MQ0=0;MQRankSum=-10.758;QD=54.54;ReadPosRankSum=3.108;VQSLOD=5.1459;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,3810	1/1:0,9:9:27.09:602,27,0	0/0:21,0:21:63.22:0,63,1822	0/0:32,0:32:87.30:0,87,2588	0/0:35,0:35:99:0,99,3119	1/1:3,20:23:48.16:1069,48,0	1/1:2,21:23:48.16:1069,48,0	1/1:4,27:31:78.27:1718,78,0	0/0:30,0:30:87.30:0,87,2804	1/1:1,15:16:45.15:1001,45,0	1/1:0,9:9:24.08:535,24,0	0/0:36,0:36:99:0,108,3371	0/0:31,0:31:90.30:0,90,2716	0/1:1,31:32:15.68:1658,0,16	1/1:4,27:31:72.25:1605,72,0	1/1:0,21:21:57.20:1271,57,0	1/1:0,26:26:69.24:1538,69,0	1/1:1,22:23:54.19:1204,54,0	1/1:2,11:13:33.10:667,33,0	1/1:0,21:21:48.16:1069,48,0	1/1:1,44:45:99:2338,104,0	0/0:29,0:29:84.28:0,84,2609	0/0:20,0:20:59.69:0,60,1797	0/0:38,0:38:99:0,114,3622	0/0:29,0:29:84.29:0,84,2665	1/1:1,28:29:81.25:1746,81,0	1/1:1,20:21:48.16:1070,48,0	1/1:0,15:15:45.15:1004,45,0
chr10	76893712	.	TAAAAAC	T	13553.85	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=14.562;DP=591;FS=3.020;HRun=0;HaplotypeScore=131.5105;InbreedingCoeff=0.9891;MQ=65.81;MQ0=0;MQRankSum=-13.499;QD=39.86;ReadPosRankSum=0.419;VQSLOD=4.9401;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:93.30:0,93,2874	1/1:1,7:8:18.06:364,18,0	0/0:19,0:17:16.39:0,16,941	0/0:23,0:23:37.45:0,37,973	0/0:25,0:25:66.23:0,66,2114	1/1:5,18:23:39.13:848,39,0	1/1:0,13:13:27.09:587,27,0	1/1:6,14:20:42.14:839,42,0	0/0:18,0:18:48.16:0,48,1622	1/1:2,22:25:66.22:1368,66,0	1/1:0,16:17:42.14:820,42,0	0/0:18,0:18:45.15:0,45,1433	0/0:26,0:26:63.22:0,63,1974	1/1:3,10:14:30.10:652,30,0	1/1:2,18:20:48.16:1006,48,0	1/1:9,24:33:57.20:1220,57,0	1/1:7,12:19:15.05:297,15,0	1/1:4,14:18:21.07:457,21,0	1/1:4,17:21:51.12:818,51,0	1/1:4,21:25:48.16:984,48,0	1/1:9,14:23:11.53:290,12,0	0/0:22,0:22:60.21:0,60,2029	0/0:21,0:21:57.17:0,57,1835	0/0:20,0:20:54.14:0,54,1744	0/0:24,0:24:60.19:0,60,1901	1/1:1,23:24:69.23:1377,69,0	1/1:4,16:20:36.12:780,36,0	1/1:3,14:17:39.13:845,39,0
chr10	76897232	.	G	GT	631.99	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.917;DP=647;FS=5.474;HRun=8;HaplotypeScore=59.8250;InbreedingCoeff=0.9617;MQ=77.59;MQ0=0;MQRankSum=0.336;QD=24.31;ReadPosRankSum=-3.927;VQSLOD=2.7791;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.05:0,93,851	0/0:4,0:4:12.01:0,12,110	0/0:19,0:19:34.54:0,35,300	0/0:12,0:11:20.62:0,21,163	0/0:31,0:31:81.02:0,81,736	0/0:27,0:27:78.02:0,78,709	0/0:27,0:27:75:0,75,677	1/1:4,22:26:66.14:727,66,0	0/0:30,0:30:78.02:0,78,709	0/0:21,0:21:51.01:0,51,467	0/0:19,0:19:51:0,51,462	0/0:24,0:24:60:0,60,544	0/0:30,0:30:80.99:0,81,726	0/0:21,0:21:63.02:0,63,571	0/0:31,0:31:78.01:0,78,709	0/0:30,0:30:84.03:0,84,765	0/0:27,0:27:75.02:0,75,681	0/0:9,0:9:21:0,21,188	0/0:24,0:24:66.01:0,66,598	0/0:21,0:21:60.03:0,60,549	0/0:18,0:18:47.99:0,48,434	0/0:27,0:27:69.03:0,69,631	0/0:29,0:29:84.02:0,84,762	0/0:21,0:21:59.97:0,60,536	0/0:29,0:29:75.03:0,75,686	0/0:26,0:26:78.04:0,78,713	0/0:19,0:18:54.01:0,54,490	0/0:11,0:11:33.02:0,33,302
chr10	76898685	.	G	GACACACACACAT	4669.71	PASS	AB=0.788;AC=34;AF=0.607;AN=56;BaseQRankSum=-4.273;DP=586;FS=2.518;HRun=0;HaplotypeScore=190.7838;InbreedingCoeff=0.8403;MQ=62.36;MQ0=7;MQRankSum=-1.201;QD=12.07;ReadPosRankSum=0.804;VQSLOD=4.0120;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:32:61.29:472,61,0	0/0:5,0:5:0:0,0,0	0/0:22,0:11:9.16:0,9,148	0/1:32,0:18:0.61:1,0,15	0/0:21,0:20:26.08:0,26,182	0/1:5,14:19:0.26:0,0,0	1/1:49,0:48:93.43:829,93,0	1/1:18,0:18:19.19:194,19,0	0/0:19,0:20:38.95:0,39,546	1/1:14,0:13:29.93:313,30,0	1/1:8,0:8:7.96:105,8,0	0/0:22,0:21:44.97:0,45,855	0/0:25,0:25:32.83:0,33,650	1/1:14,0:14:26.93:217,27,0	1/1:25,0:25:2.95:80,3,0	1/1:15,0:15:6.45:101,6,0	1/1:18,0:17:14.75:203,15,0	1/1:22,0:22:39.08:689,39,0	1/1:15,0:15:15.91:180,16,0	1/1:16,0:16:11.46:89,11,0	1/1:36,0:35:29.40:202,29,0	0/0:15,0:16:32.64:0,33,313	0/0:10,0:10:23.96:0,24,211	0/0:39,0:40:92.95:0,93,1405	0/0:17,0:17:29.78:0,30,217	1/1:24,0:24:37.09:419,37,0	1/1:18,0:18:29.98:390,30,0	1/1:9,0:8:20.93:185,21,0
chr10	76898687	.	C	CACACACACAT	4664.04	PASS	AB=1.000;AC=32;AF=0.593;AN=54;BaseQRankSum=-4.024;DP=612;FS=1.350;HRun=0;HaplotypeScore=177.7508;InbreedingCoeff=0.7367;MQ=61.03;MQ0=10;MQRankSum=1.239;QD=11.52;ReadPosRankSum=0.959;VQSLOD=4.0584;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:34:59.83:468,60,0	./.	0/0:22,0:11:9.38:0,9,149	0/1:29,0:15:0.62:1,0,15	0/0:22,0:21:29.07:0,29,205	0/1:19,0:18:0.17:0,0,0	1/1:50,0:49:72.03:802,72,0	1/1:18,0:18:9.24:181,9,0	0/0:21,0:21:38.95:0,39,505	1/1:17,0:16:34.33:327,34,0	1/1:10,0:10:7.96:105,8,0	0/0:25,0:23:47.98:0,48,853	0/0:25,0:25:38.80:0,39,643	1/1:16,0:15:26.92:217,27,0	1/1:6,16:26:2.98:94,3,0	1/1:16,0:16:6.28:101,6,0	0/1:21,0:20:70.58:186,0,71	0/1:24,0:24:0.72:684,0,1	1/1:15,0:15:9.64:171,10,0	1/1:17,0:17:11.52:89,12,0	1/1:34,0:33:29.35:200,29,0	0/0:16,0:16:32.17:0,32,299	0/0:11,0:11:23.96:0,24,211	0/0:42,0:41:96.33:0,96,1325	0/0:18,0:18:29.77:0,30,217	1/1:10,17:26:36.54:450,37,0	1/1:20,0:19:29.99:402,30,0	1/1:10,0:8:20.93:185,21,0
chr10	76898689	.	C	CACACACAT	4311.56	PASS	AB=0.935;AC=31;AF=0.554;AN=56;BaseQRankSum=-4.019;DP=611;FS=0.000;HRun=0;HaplotypeScore=161.1676;InbreedingCoeff=0.5750;MQ=58.85;MQ0=14;MQRankSum=2.669;QD=10.52;ReadPosRankSum=1.005;VQSLOD=3.4442;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:34:59.99:468,60,0	0/1:1,5:6:0:0,0,0	0/0:21,0:10:9.72:0,10,151	0/1:26,0:12:0.61:1,0,15	0/0:22,0:21:32.07:0,32,230	0/1:20,0:19:0.03:0,0,0	1/1:51,0:50:63.17:792,63,0	0/1:18,0:17:18.18:170,0,18	0/0:21,0:21:44.93:0,45,512	1/1:17,0:16:12.34:281,12,0	1/1:12,0:11:7.96:105,8,0	0/0:24,0:22:47.98:0,48,765	0/0:26,0:26:41.80:0,42,616	1/1:17,0:16:26.83:217,27,0	1/1:24,0:25:2.99:125,3,0	1/1:15,0:15:5.88:101,6,0	0/1:21,0:20:85.80:180,0,86	0/1:24,0:23:21.87:502,0,22	0/1:14,0:14:4.34:150,0,4	1/1:17,0:17:11.92:90,12,0	1/1:34,0:33:28.23:198,28,0	0/0:15,0:15:32.17:0,32,285	0/0:11,0:11:23.96:0,24,211	0/0:43,0:42:96.34:0,96,1222	0/0:18,0:17:29.80:0,30,217	1/1:27,0:26:9.73:355,10,0	1/1:20,0:19:30:392,30,0	1/1:10,0:8:20.93:185,21,0
chr10	76898695	.	C	CAT	3149.60	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=-2.075;DP=588;FS=7.014;HRun=0;HaplotypeScore=95.4764;InbreedingCoeff=0.2004;MQ=55.79;MQ0=15;MQRankSum=0.929;QD=8.70;ReadPosRankSum=1.632;VQSLOD=2.7942;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:27:59.77:468,60,0	0/0:5,0:5:0:0,0,0	0/0:18,0:8:10.33:0,10,163	0/1:23,0:9:0.77:1,0,14	0/0:23,0:22:34.67:0,35,240	0/0:20,0:19:2.83:0,3,24	0/1:51,0:50:28.66:652,0,29	0/1:18,0:17:69.48:163,0,69	0/0:20,0:20:44.80:0,45,405	0/1:19,0:18:67.37:245,0,67	0/1:11,0:10:14:94,0,14	0/0:23,0:21:47.96:0,48,506	0/0:26,0:26:47.70:0,48,514	1/1:18,0:17:6.96:194,7,0	0/1:20,0:20:17.96:24,0,18	1/1:3,11:14:0.56:34,1,0	0/1:20,0:19:16.29:181,0,16	0/1:26,0:25:99:172,0,112	0/1:13,0:13:72.67:140,0,73	1/1:14,0:14:11.92:90,12,0	1/1:34,0:33:25.88:182,26,0	0/0:17,0:17:32.14:0,32,246	0/0:11,0:11:23.96:0,24,208	0/0:42,0:41:99:0,102,955	0/0:21,0:19:32.80:0,33,242	0/1:24,0:23:92.03:210,0,92	1/1:18,0:17:10.91:297,11,0	1/1:10,0:8:20.59:184,21,0
chr10	76901560	.	TAC	T	4498.89	PASS	AB=0.868;AC=36;AF=0.643;AN=56;BaseQRankSum=2.703;DP=431;FS=4.062;HRun=0;HaplotypeScore=58.5769;InbreedingCoeff=0.6137;MQ=69.38;MQ0=6;MQRankSum=1.120;QD=15.46;ReadPosRankSum=3.148;VQSLOD=4.1970;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:32:35.90:0,36,317	1/1:0,4:4:12.04:139,12,0	0/1:30,0:15:2.84:3,0,172	0/0:31,0:21:21.07:0,21,322	0/0:14,0:14:3.01:0,3,41	1/1:7,12:18:32.83:360,33,0	1/1:7,13:20:27.08:313,27,0	1/1:13,15:28:45.10:495,45,0	0/1:10,1:11:19.79:20,0,172	1/1:2,12:13:36.10:415,36,0	1/1:1,10:11:24.07:278,24,0	0/0:16,0:16:4.44:0,4,464	0/0:12,0:12:27.06:0,27,370	1/1:6,6:12:9.03:104,9,0	1/1:5,9:14:26.91:293,27,0	0/1:2,8:9:31.65:124,0,32	1/1:6,16:23:38.95:432,39,0	1/1:3,13:18:29.75:306,30,0	1/1:6,2:8:6.02:70,6,0	1/1:4,10:14:27.05:299,27,0	1/1:4,10:14:18.05:209,18,0	0/1:6,0:6:19.16:19,0,168	0/0:6,0:6:12.02:0,12,163	0/0:18,0:18:45.15:0,45,696	0/0:7,0:10:9.01:0,9,98	1/1:1,11:13:35.94:397,36,0	1/1:8,3:12:11.87:118,12,0	1/1:4,4:8:9.03:104,9,0
chr10	76902727	.	A	AACTGGGT	34158.89	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-8.006;DP=615;FS=0.641;HRun=0;HaplotypeScore=133.6673;InbreedingCoeff=0.9984;MQ=79.07;MQ0=1;MQRankSum=-18.566;QD=95.68;ReadPosRankSum=-1.457;VQSLOD=5.5102;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.28:0,90,2200	1/1:1,8:9:24.08:953,24,0	0/0:20,0:20:54.17:0,54,1270	0/0:21,0:21:48.13:0,48,1085	0/0:23,0:23:57.18:0,57,1406	1/1:8,15:24:66.23:2459,66,0	1/1:8,17:28:63.22:2386,63,0	1/1:15,10:28:75.24:2606,75,0	0/0:18,0:18:51.18:0,51,1322	1/1:6,15:24:69.22:2497,69,0	1/1:2,14:18:39.13:1526,39,0	0/0:29,0:29:87.30:0,87,2242	0/0:32,0:32:87.29:0,87,2171	1/1:4,15:21:54.19:2139,54,0	1/1:6,19:25:75.26:2709,75,0	1/1:11,9:21:57.19:2173,57,0	1/1:7,17:24:57.20:2130,57,0	1/1:4,7:12:27.09:1078,27,0	1/1:10,10:22:51.17:1802,51,0	1/1:2,16:22:57.20:2076,57,0	1/1:5,12:18:42.14:1418,42,0	0/0:18,0:18:54.18:0,54,1316	0/0:16,0:16:48.15:0,48,1168	0/0:26,0:26:78.27:0,78,1965	0/0:24,0:24:72.25:0,72,1810	1/1:11,16:30:84.29:3162,84,0	1/1:6,17:24:60.21:2328,60,0	1/1:1,5:6:18.06:717,18,0
chr10	76903219	.	C	CTTT	13299.60	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=6.512;DP=703;FS=3.683;HRun=9;HaplotypeScore=102.9253;InbreedingCoeff=0.9483;MQ=58.86;MQ0=4;MQRankSum=-4.261;QD=26.65;ReadPosRankSum=-0.212;VQSLOD=3.4439;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,1:42:74.62:602,75,0	1/1:4,7:11:12.04:234,12,0	0/1:10,0:9:0.82:1,0,90	0/0:8,0:7:14.24:0,14,146	0/0:20,0:20:48.07:0,48,553	1/1:1,16:17:30.10:589,30,0	1/1:4,11:16:27.07:477,27,0	1/1:13,28:40:69.17:1217,69,0	0/0:19,0:19:45.11:0,45,568	1/1:8,26:35:80.18:1181,80,0	1/1:2,19:21:43.30:692,43,0	0/0:21,0:21:54.13:0,54,665	0/0:23,0:21:51.12:0,51,641	1/1:4,13:18:24.04:403,24,0	1/1:18,8:25:59.10:785,59,0	1/1:4,31:34:51.14:956,51,0	1/1:8,30:35:54.13:1025,54,0	1/1:4,18:22:36.07:670,36,0	1/1:19,18:36:23.88:797,24,0	1/1:1,28:28:55.04:970,55,0	1/1:3,17:21:33.11:645,33,0	0/0:24,0:24:60.18:0,60,747	0/0:20,0:20:42.07:0,42,530	0/0:45,0:45:99:0,102,1207	0/0:21,0:21:57.16:0,57,717	1/1:14,10:25:57.17:946,57,0	1/1:7,27:34:30.99:593,31,0	1/1:2,16:19:27.09:516,27,0
chr10	76904300	.	T	TC	10047.93	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-11.267;DP=503;FS=3.319;HRun=5;HaplotypeScore=52.4601;InbreedingCoeff=0.9859;MQ=82.50;MQ0=0;MQRankSum=-3.606;QD=30.73;ReadPosRankSum=-0.536;VQSLOD=5.1392;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:29:63.20:821,63,0	1/1:0,7:7:12.04:158,12,0	0/0:15,0:14:37.07:0,37,342	0/0:17,0:17:10.64:0,11,267	0/0:18,0:18:45.11:0,45,483	1/1:1,10:11:24.08:315,24,0	1/1:3,20:23:54.13:691,54,0	1/1:5,18:23:54.18:706,54,0	0/0:9,0:9:24.06:0,24,258	1/1:0,18:19:54.17:702,54,0	1/1:1,16:17:45.06:561,45,0	0/0:31,0:31:87.17:0,87,911	0/0:20,0:20:54.13:0,54,579	1/1:1,17:18:39.13:513,39,0	1/1:1,13:14:30.10:394,30,0	1/1:0,14:14:30.10:395,30,0	1/1:3,32:35:84.27:1105,84,0	1/1:2,29:31:81.26:1065,81,0	1/1:3,13:16:33.06:389,33,0	1/1:1,8:9:21.07:276,21,0	1/1:3,24:27:63.20:816,63,0	0/0:12,0:12:30.07:0,30,317	0/0:15,0:15:43.92:0,44,456	0/0:32,0:32:90.22:0,90,967	0/0:7,0:7:21.05:0,21,226	1/1:2,13:15:33.11:434,33,0	1/1:5,8:13:36.12:471,36,0	1/1:1,5:6:18.06:235,18,0
chr10	76904464	.	G	GA	260.79	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.876;DP=592;FS=7.374;HRun=2;HaplotypeScore=95.6343;InbreedingCoeff=0.9471;MQ=76.36;MQ0=1;MQRankSum=-4.401;QD=11.34;ReadPosRankSum=-1.370;VQSLOD=1.1574;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,8:22:18.16:351,18,0	0/0:5,0:5:15.03:0,15,165	0/0:36,0:25:39.35:0,39,583	0/0:25,0:19:38.13:0,38,399	0/0:27,0:27:72.23:0,72,888	0/0:22,0:22:51.16:0,51,628	0/0:20,0:20:54.10:0,54,650	0/0:38,0:38:90.12:0,90,1067	0/0:11,0:11:33.10:0,33,409	0/0:21,0:21:54.15:0,54,645	0/0:21,0:21:57.16:0,57,688	0/0:25,0:25:72.23:0,72,891	0/0:16,0:16:48.14:0,48,582	0/0:22,0:22:45.14:0,45,553	0/0:16,0:16:36.11:0,36,446	0/0:19,0:19:51.14:0,51,617	0/0:24,0:24:48.98:0,49,564	0/0:20,0:20:51.04:0,51,597	0/0:21,0:21:57.15:0,57,681	0/0:20,0:20:57.18:0,57,699	0/0:4,0:4:12.04:0,12,149	0/0:17,0:17:42.12:0,42,506	0/0:20,0:20:60.10:0,60,662	0/0:32,0:32:90.22:0,90,1082	0/0:26,0:26:63.17:0,63,754	0/0:22,0:22:60.18:0,60,732	0/0:24,0:24:57.18:0,57,701	0/0:12,0:12:36.11:0,36,446
chr10	76904477	.	G	GAA	10058.89	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-5.243;DP=610;FS=15.876;HRun=11;HaplotypeScore=80.3825;InbreedingCoeff=0.9390;MQ=72.28;MQ0=1;MQRankSum=-0.692;QD=23.28;ReadPosRankSum=0.145;VQSLOD=2.6495;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,12:20:27.43:332,27,0	1/1:1,6:7:18.06:261,18,0	0/0:37,0:23:10.90:0,11,181	0/0:26,0:19:6.61:0,7,75	1/1:7,1:26:46.27:201,46,0	1/1:5,18:24:35.61:487,36,0	1/1:8,11:19:7.59:373,8,0	1/1:6,24:35:89.17:1106,89,0	0/0:15,0:15:36.02:0,36,349	1/1:7,14:22:45.10:618,45,0	1/1:4,18:24:59.60:770,60,0	0/0:24,0:24:53.96:0,54,516	0/0:15,0:15:20.97:0,21,204	1/1:2,23:25:42.14:608,42,0	1/1:4,13:17:24.08:348,24,0	1/1:7,14:21:35.97:470,36,0	1/1:5,19:24:18.31:507,18,0	1/1:4,15:20:39.13:565,39,0	1/1:4,21:26:62.66:841,63,0	1/1:3,17:22:50.62:647,51,0	1/1:2,5:7:9.03:130,9,0	0/0:13,0:13:8.38:0,8,266	0/0:19,0:19:38.74:0,39,362	0/0:28,0:28:72.04:0,72,690	1/1:2,2:26:48.32:232,48,0	1/1:5,13:20:44.59:564,45,0	1/1:8,22:31:21.40:631,21,0	1/1:6,9:15:27.04:367,27,0
chr10	76905922	.	AAC	A	196.07	PASS	AB=0.935;AC=7;AF=0.140;AN=50;BaseQRankSum=-0.220;DP=556;FS=1.213;HRun=0;HaplotypeScore=95.8409;InbreedingCoeff=0.2946;MQ=59.91;MQ0=14;MQRankSum=2.507;QD=1.78;ReadPosRankSum=1.181;VQSLOD=1.9730;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:36:3:0,3,26	0/0:5,0:5:2.99:0,3,24	./.	./.	1/1:7,7:13:12.03:129,12,0	0/0:11,0:11:11.98:0,12,98	0/0:32,0:31:11.02:0,11,118	0/0:24,0:24:20.45:0,20,177	0/0:22,0:21:27.07:0,27,348	0/0:17,0:17:18.83:0,19,179	./.	0/1:16,1:17:11.28:11,0,189	0/0:16,0:16:12.04:0,12,176	0/0:18,0:18:5.84:0,6,62	0/0:14,0:13:2.22:0,2,7	0/0:14,0:14:7.07:0,7,37	0/0:31,0:31:24.28:0,24,171	0/0:19,0:19:21.44:0,21,209	0/0:13,0:12:20.83:0,21,168	0/0:8,0:14:5.49:0,5,24	0/0:30,0:30:21.25:0,21,156	0/0:19,0:19:9.03:0,9,119	0/1:17,1:17:20.26:20,0,112	0/1:38,3:40:65.07:65,0,421	1/1:12,7:18:11.82:98,12,0	0/0:23,0:23:24.80:0,25,244	0/0:17,0:17:12.59:0,13,102	0/0:2,0:3:3:0,3,26
chr10	76910985	.	GA	G	11854.65	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=17.828;DP=717;FS=2.468;HRun=4;HaplotypeScore=190.1694;InbreedingCoeff=0.9998;MQ=56.87;MQ0=2;MQRankSum=-16.198;QD=26.58;ReadPosRankSum=-3.544;VQSLOD=2.2944;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:17,5:22:31.45:380,31,0	1/1:10,5:15:38.99:429,39,0	0/0:23,0:20:52.34:0,52,648	0/0:29,0:23:64.16:0,64,755	0/0:18,0:18:51.13:0,51,677	1/1:18,6:24:64.14:651,64,0	1/1:15,13:28:66.61:662,67,0	1/1:15,23:38:99:1248,111,0	0/0:32,0:32:96.30:0,96,1310	1/1:25,8:33:95.05:1024,95,0	1/1:18,10:28:53.16:441,53,0	0/0:30,0:30:87.28:0,87,1199	0/0:35,0:35:99:0,105,1410	1/1:19,9:28:71.35:719,71,0	1/1:21,10:31:75.70:781,76,0	1/1:25,3:28:80.42:847,80,0	1/1:12,11:23:56.87:602,57,0	1/1:10,7:17:45.05:506,45,0	1/1:9,13:22:60.17:689,60,0	1/1:15,9:24:51.91:500,52,0	1/1:7,13:20:29.84:290,30,0	0/0:22,0:22:66.20:0,66,890	0/0:17,0:17:48.15:0,48,653	0/0:36,0:37:99:0,99,1384	0/0:28,0:28:84.26:0,84,1142	1/1:19,8:27:77.32:837,77,0	1/1:18,7:25:75.10:816,75,0	1/1:12,1:13:39.11:433,39,0
chr10	76910988	.	A	AGG	9680.10	PASS	AB=0.745;AC=30;AF=0.536;AN=56;BaseQRankSum=18.978;DP=724;FS=8.316;HRun=0;HaplotypeScore=209.6347;InbreedingCoeff=0.4897;MQ=57.08;MQ0=2;MQRankSum=-15.965;QD=21.51;ReadPosRankSum=-0.412;VQSLOD=4.0901;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,14:24:1.24:381,1,0	1/1:5,10:15:2.01:370,2,0	0/0:25,0:22:58:0,58,829	0/0:29,0:24:63.18:0,63,905	0/0:17,0:17:51.17:0,51,832	1/1:9,16:25:36.57:663,37,0	0/1:14,14:28:17.18:392,0,17	0/1:24,14:38:73.19:685,0,73	0/0:32,0:32:96.33:0,96,1565	1/1:10,23:33:51:1003,51,0	1/1:11,17:28:8.78:335,9,0	0/0:30,0:30:90.31:0,90,1456	0/0:36,0:36:99:0,108,1697	1/1:10,18:28:32.89:680,33,0	1/1:10,20:30:46.93:789,47,0	1/1:4,24:28:54.14:959,54,0	0/1:13,12:25:35.45:455,0,35	0/1:11,6:17:29.08:254,0,29	0/1:19,6:25:66.97:258,0,67	1/1:9,14:23:20.94:476,21,0	0/1:14,3:17:19.28:84,0,19	0/0:23,0:23:69.20:0,69,1056	0/0:16,0:16:48.16:0,48,769	0/0:36,0:36:70.18:0,70,1559	0/0:28,0:28:84.28:0,84,1323	1/1:12,16:28:15.32:727,15,0	1/1:7,17:25:6.04:677,6,0	1/1:1,12:13:34.95:491,35,0
chr10	76910990	.	G	GA	8399.71	PASS	AB=0.690;AC=25;AF=0.446;AN=56;BaseQRankSum=19.107;DP=732;FS=10.950;HRun=4;HaplotypeScore=205.6658;InbreedingCoeff=0.2612;MQ=57.82;MQ0=2;MQRankSum=-15.444;QD=18.50;ReadPosRankSum=0.075;VQSLOD=2.5263;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,14:27:21.88:416,0,22	0/1:5,10:15:0.20:324,0,0	0/0:25,0:22:59.49:0,59,698	0/0:33,0:26:68.93:0,69,802	0/0:18,0:18:54.17:0,54,739	1/1:9,16:25:18.07:579,18,0	0/1:16,14:30:78.06:346,0,78	0/1:24,14:38:99:495,0,270	0/0:34,0:34:99:0,99,1362	1/1:8,22:31:16.17:788,16,0	0/1:11,17:28:3.76:269,0,4	0/0:30,0:30:90.30:0,90,1254	0/0:37,0:37:99:0,105,1421	1/1:10,18:28:10.14:568,10,0	1/1:11,20:31:45.49:676,45,0	1/1:5,24:29:33.06:832,33,0	0/1:13,12:25:84.06:443,0,84	0/1:10,6:16:28.14:234,0,28	0/1:18,6:24:99:296,0,128	1/1:8,14:22:40.01:413,40,0	0/1:16,3:19:11.93:76,0,12	0/0:22,0:22:63.20:0,63,859	0/0:16,0:16:48.16:0,48,669	0/0:36,0:36:99:0,102,1405	0/0:27,0:27:81.24:0,81,1107	0/1:12,16:28:38.95:646,0,39	0/1:8,17:25:54.77:558,0,55	1/1:1,12:13:38.85:440,39,0
chr10	76910991	.	GA	G	5814.85	PASS	AB=0.956;AC=27;AF=0.482;AN=56;BaseQRankSum=18.752;DP=727;FS=7.474;HRun=1;HaplotypeScore=216.5408;InbreedingCoeff=0.3887;MQ=58.38;MQ0=2;MQRankSum=-18.539;QD=12.89;ReadPosRankSum=3.142;VQSLOD=3.9306;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,2:27:8.48:377,0,8	1/1:15,0:15:14.36:194,14,0	0/0:26,0:23:62.76:0,63,894	0/0:34,0:27:68.15:0,68,1024	0/0:18,0:18:54.18:0,54,861	1/1:25,1:26:25.10:375,25,0	0/1:29,0:29:18.59:290,0,19	0/1:39,1:40:99:358,0,162	0/0:34,0:34:99:0,102,1576	1/1:30,0:30:3.52:471,4,0	1/1:27,0:27:19.82:373,20,0	0/0:30,0:30:90.31:0,90,1426	0/0:34,0:34:99:0,102,1592	1/1:26,0:26:19.98:383,20,0	1/1:30,0:30:15.59:393,16,0	1/1:29,0:29:62.80:542,63,0	0/1:23,2:25:13.73:286,0,14	0/1:15,1:16:55.13:143,0,55	0/1:22,2:24:59.77:193,0,60	1/1:24,0:24:40.09:341,40,0	0/1:16,1:18:34.20:143,0,34	0/0:22,0:22:63.21:0,63,965	0/0:16,0:16:48.16:0,48,767	0/0:35,0:35:98.14:0,98,1555	0/0:27,0:27:78.26:0,78,1224	0/1:27,0:27:2.37:373,0,2	0/1:24,1:25:3.79:321,0,4	1/1:13,0:13:26.58:258,27,0
chr10	76910992	.	A	AGG	10988.27	PASS	AB=0.671;AC=19;AF=0.339;AN=56;BaseQRankSum=19.019;DP=767;FS=9.043;HRun=2;HaplotypeScore=230.0471;InbreedingCoeff=-0.3291;MQ=57.06;MQ0=2;MQRankSum=-17.940;QD=22.43;ReadPosRankSum=1.374;VQSLOD=2.7118;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,14:28:65.67:567,0,66	0/1:6,9:15:83.11:382,0,83	0/0:27,0:24:62.57:0,63,881	0/0:34,0:27:48:0,48,908	0/0:18,0:18:54.18:0,54,821	0/1:12,16:28:45.81:743,0,46	0/1:17,14:31:99:556,0,231	0/1:34,14:48:99:809,0,541	0/0:34,0:34:99:0,102,1489	0/1:12,23:35:93.45:972,0,93	0/1:10,17:27:99:445,0,102	0/0:30,0:30:87.28:0,87,1311	0/0:34,0:34:99:0,99,1490	0/1:10,18:28:56.25:731,0,56	0/1:12,20:32:18.60:804,0,19	0/1:5,24:29:5.43:969,0,5	0/1:14,12:26:99:561,0,207	0/1:11,6:17:99:268,0,240	0/1:24,6:30:99:440,0,383	0/1:11,14:25:40.21:524,0,40	0/1:19,3:21:99:190,0,139	0/0:22,0:22:62.84:0,63,883	0/0:16,0:16:48.16:0,48,733	0/0:36,0:36:57.36:0,57,1380	0/0:26,0:26:72.24:0,72,1087	0/1:13,16:29:99:815,0,157	0/1:9,17:26:99:704,0,110	1/1:2,12:14:18.17:510,18,0
chr10	76911595	.	G	GTC	24325.72	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=14.286;DP=785;FS=10.863;HRun=0;HaplotypeScore=119.9297;InbreedingCoeff=0.9999;MQ=77.41;MQ0=0;MQRankSum=-7.187;QD=46.42;ReadPosRankSum=2.036;VQSLOD=5.6272;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,51:55:99:2687,148,0	1/1:0,12:12:33.11:604,33,0	0/0:26,0:26:72.22:0,72,992	0/0:22,0:22:59.38:0,59,783	0/0:24,0:24:66.22:0,66,945	1/1:1,23:25:54.19:985,54,0	1/1:1,25:26:51.17:934,51,0	1/1:4,26:30:84.27:1479,84,0	0/0:26,0:26:75.25:0,75,1075	1/1:1,18:20:57.16:984,57,0	1/1:1,13:14:33.11:603,33,0	0/0:31,0:31:90.30:0,90,1289	0/0:38,0:38:99:0,111,1590	1/1:1,28:29:75.15:1374,75,0	1/1:2,32:35:53.36:1660,53,0	1/1:3,32:35:47.31:1547,47,0	1/1:0,38:38:99:1925,105,0	1/1:2,15:18:45.15:824,45,0	1/1:1,17:18:51.15:890,51,0	1/1:1,32:34:87.30:1591,87,0	1/1:3,40:43:99:1804,99,0	0/0:32,0:32:93.31:0,93,1328	0/0:16,0:16:48.16:0,48,688	0/0:27,0:27:72.24:0,72,1032	0/0:19,0:19:54.18:0,54,774	1/1:4,24:28:75.26:1365,75,0	1/1:3,40:43:99:2026,111,0	1/1:0,21:21:57.20:1044,57,0
chr10	76913720	.	C	CA	2361.76	PASS	AB=1.000;AC=45;AF=0.938;AN=48;BaseQRankSum=5.154;DP=154;FS=1.290;HRun=0;HaplotypeScore=93.4763;InbreedingCoeff=0.4278;MQ=68.96;MQ0=1;MQRankSum=-2.875;QD=16.40;ReadPosRankSum=3.914;VQSLOD=6.0418;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,9:12:26.95:295,27,0	./.	0/0:9,0:8:16.71:0,17,99	0/1:7,0:6:2.31:2,0,49	1/1:0,3:3:3.01:30,3,0	./.	1/1:3,1:4:8.90:68,9,0	1/1:1,0:1:2.90:16,3,0	1/1:8,0:8:20.32:129,20,0	1/1:1,0:1:0.47:1,0,0	1/1:0,1:1:2.98:22,3,0	1/1:10,0:10:19.06:136,19,0	1/1:10,0:10:22.43:141,22,0	1/1:3,2:5:11.80:104,12,0	1/1:5,3:8:23.36:175,23,0	1/1:2,4:6:17.91:157,18,0	1/1:2,6:8:19.46:200,19,0	1/1:2,1:3:8.93:79,9,0	1/1:2,0:2:5.65:28,6,0	1/1:1,0:1:2.94:18,3,0	./.	1/1:13,0:13:33.72:231,34,0	1/1:9,1:10:22.27:145,22,0	1/1:11,2:12:20.68:134,21,0	1/1:7,1:8:8.66:64,9,0	./.	1/1:2,6:8:23.96:226,24,0	1/1:0,2:2:6.02:70,6,0
chr10	76913721	.	C	CAA	4028.43	PASS	AB=1.000;AC=45;AF=0.938;AN=48;BaseQRankSum=2.681;DP=170;FS=3.022;HRun=1;HaplotypeScore=94.2378;InbreedingCoeff=0.4036;MQ=76.07;MQ0=1;MQRankSum=-3.965;QD=25.34;ReadPosRankSum=3.981;VQSLOD=2.8039;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:26.96:283,27,0	./.	0/0:6,0:9:15.37:0,15,125	0/1:9,0:9:2.72:3,0,54	1/1:4,0:4:3.01:40,3,0	./.	1/1:1,3:5:9.03:157,9,0	1/1:1,1:2:3.48:57,3,0	1/1:0,7:8:22.90:188,23,0	1/1:1,0:1:3.01:30,3,0	1/1:1,0:1:3.01:43,3,0	1/1:3,8:11:24.53:206,25,0	1/1:0,10:10:28.61:228,29,0	1/1:2,3:5:12.04:190,12,0	1/1:7,1:8:24.06:324,24,0	1/1:5,2:7:18.06:286,18,0	1/1:8,0:8:23.57:339,24,0	1/1:3,0:3:9.03:113,9,0	1/1:4,0:4:9:117,9,0	1/1:1,1:3:6.02:90,6,0	./.	1/1:1,11:13:38.58:339,39,0	1/1:6,4:10:26.20:225,26,0	1/1:2,11:12:21:190,21,0	1/1:2,0:9:9.03:113,9,0	./.	1/1:9,1:10:25.02:372,25,0	1/1:2,0:2:6.02:97,6,0
chr10	76915912	.	C	CTG	1295.31	PASS	AB=0.929;AC=3;AF=0.054;AN=56;BaseQRankSum=-6.169;DP=553;FS=10.682;HRun=0;HaplotypeScore=67.7240;InbreedingCoeff=0.6390;MQ=71.85;MQ0=0;MQRankSum=-1.957;QD=26.99;ReadPosRankSum=0.180;VQSLOD=4.2273;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,29:35:84.29:1386,84,0	0/0:4,0:4:12.02:0,12,136	0/0:21,0:18:32.89:0,33,364	0/0:27,0:26:49.48:0,49,513	0/0:17,0:19:41.94:0,42,490	0/0:22,0:22:57.17:0,57,699	0/0:29,0:29:69.20:0,69,849	0/0:28,0:28:63.19:0,63,778	0/0:13,0:13:33.05:0,33,372	0/0:11,0:11:30.10:0,30,375	0/0:9,0:9:27.07:0,27,325	0/0:24,0:24:60.18:0,60,737	0/0:10,0:10:21.07:0,21,262	0/0:13,0:13:39.08:0,39,447	0/0:15,0:15:45.14:0,45,563	0/0:16,0:16:48.13:0,48,574	0/0:41,0:41:99:0,114,1412	0/0:25,0:25:69.05:0,69,811	0/0:18,0:18:39.10:0,39,463	0/0:12,0:12:30.09:0,30,364	0/0:37,0:36:93.19:0,93,1089	0/1:12,1:13:13.41:13,0,375	0/0:9,0:9:21.07:0,21,263	0/0:30,0:30:81.22:0,81,995	0/0:20,0:20:53.99:0,54,630	0/0:23,0:23:63.19:0,63,775	0/0:14,0:14:33.11:0,33,413	0/0:15,0:15:39.08:0,39,449
chr10	76916095	.	CGG	C	8083.14	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=7.492;DP=487;FS=0.409;HRun=10;HaplotypeScore=87.4117;InbreedingCoeff=0.9661;MQ=75.88;MQ0=0;MQRankSum=-3.723;QD=23.99;ReadPosRankSum=4.137;VQSLOD=4.5795;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:29:52.65:0,53,184	1/1:1,7:8:15.04:164,15,0	0/0:11,0:12:6.97:0,7,177	0/0:16,0:16:7.38:0,7,443	1/1:5,0:20:35.59:155,36,0	1/1:2,18:20:42.11:468,42,0	1/1:3,18:21:42.11:468,42,0	1/1:3,16:19:36.12:421,36,0	0/0:12,0:14:29.07:0,29,393	1/1:3,12:15:36.08:400,36,0	1/1:4,11:15:27.07:301,27,0	0/0:27,0:27:66.21:0,66,1017	0/0:10,0:11:20.54:0,21,263	1/1:1,11:12:27.07:300,27,0	1/1:1,18:19:42.11:468,42,0	1/1:1,11:12:27.07:301,27,0	1/1:3,29:32:78.21:869,78,0	1/1:4,27:31:75.19:836,75,0	1/1:1,9:11:20.97:292,21,0	1/1:3,11:14:33.08:367,33,0	1/1:1,23:24:60.16:669,60,0	0/0:14,0:16:29.56:0,30,392	0/0:7,0:7:15.05:0,15,232	0/0:18,0:18:42.13:0,42,638	1/1:0,0:13:35.68:156,36,0	1/1:5,16:21:48.10:534,48,0	1/1:1,17:19:53.87:580,54,0	1/1:1,10:11:30.08:334,30,0
chr10	76916104	.	GGA	G	1851.45	PASS	AB=0.982;AC=21;AF=0.375;AN=56;BaseQRankSum=10.725;DP=489;FS=2.464;HRun=0;HaplotypeScore=110.0225;InbreedingCoeff=0.0276;MQ=72.70;MQ0=0;MQRankSum=-0.875;QD=5.86;ReadPosRankSum=7.685;VQSLOD=2.4146;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:60.44:0,60,330	0/1:11,0:11:33.74:34,0,48	0/0:9,0:9:17.24:0,17,187	0/0:17,0:18:15.66:0,16,645	0/0:17,0:17:9.50:0,10,100	0/1:22,0:22:42.98:105,0,43	0/1:21,0:21:19.63:112,0,20	0/1:21,0:21:63.67:64,0,133	0/0:13,0:13:35.92:0,36,526	0/1:15,1:16:24.14:116,0,24	0/1:13,0:13:20.34:68,0,20	0/0:23,0:23:69.22:0,69,1208	0/0:10,0:10:20.97:0,21,295	0/1:14,1:15:17.45:94,0,17	0/1:20,0:20:6.66:145,0,7	1/1:12,0:12:6.33:87,6,0	1/1:31,0:31:27.88:242,28,0	0/1:31,0:31:19.70:192,0,20	0/1:12,0:12:39.89:56,0,40	0/1:14,2:16:38.11:141,0,38	0/1:28,0:28:32.82:151,0,33	0/0:14,0:14:38.96:0,39,549	0/0:8,0:8:24.04:0,24,338	0/0:20,0:20:60.08:0,60,891	0/0:15,0:15:32.05:0,32,150	1/1:16,1:17:19.30:164,19,0	0/1:20,0:20:4.44:166,0,4	1/1:10,0:10:25.05:97,25,0
chr10	76918193	.	GGA	G	14905.14	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=18.001;DP=675;FS=1.366;HRun=0;HaplotypeScore=119.9579;InbreedingCoeff=0.9933;MQ=78.68;MQ0=0;MQRankSum=-4.066;QD=33.49;ReadPosRankSum=2.293;VQSLOD=7.2363;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.29:0,84,1473	1/1:1,10:11:30.10:406,30,0	0/0:25,0:24:66.22:0,66,1116	0/0:28,0:28:60.21:0,60,1036	1/1:3,24:27:75.25:1014,75,0	1/1:4,23:27:60.20:812,60,0	1/1:3,21:24:63.21:841,63,0	1/1:6,31:37:93.31:1256,93,0	0/0:27,0:27:78.27:0,78,1360	1/1:6,25:31:75.23:995,75,0	1/1:4,23:27:69.19:912,69,0	0/0:30,0:30:87.30:0,87,1516	0/0:33,0:33:96.33:0,96,1675	1/1:1,22:23:63.17:831,63,0	1/1:3,26:29:69.23:933,69,0	1/1:4,22:26:10.59:758,11,0	1/1:1,23:24:63.21:852,63,0	1/1:2,16:18:36.12:487,36,0	1/1:5,15:20:45.15:608,45,0	1/1:2,15:17:45.15:609,45,0	1/1:2,17:19:48.12:629,48,0	0/0:17,0:17:42.14:0,42,728	0/0:26,0:26:72.25:0,72,1250	0/0:15,0:15:45.14:0,45,761	1/1:2,29:31:78.26:1055,78,0	1/1:2,18:20:54.18:729,54,0	1/1:2,18:20:51.17:690,51,0	1/1:0,14:14:36.12:487,36,0
chr10	76921867	.	G	GTGCA	716.42	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.818;DP=695;FS=2.636;HRun=0;HaplotypeScore=117.2194;InbreedingCoeff=0.7792;MQ=68.18;MQ0=0;MQRankSum=-1.325;QD=17.06;ReadPosRankSum=1.659;VQSLOD=3.6518;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,23:42:33.11:811,33,0	0/0:9,0:9:18.06:0,18,280	0/0:11,0:11:0:0,0,0	0/0:7,0:6:2.88:0,3,15	0/0:15,0:15:45.14:0,45,722	0/0:14,0:14:33.10:0,33,519	0/0:34,0:34:81.25:0,81,1236	0/0:29,0:29:45.15:0,45,696	0/0:26,0:26:69.22:0,69,1109	0/0:21,0:21:54.17:0,54,857	0/0:11,0:11:30.10:0,30,482	0/0:48,0:48:99:0,120,1915	0/0:29,0:29:72.21:0,72,1137	0/0:40,0:40:99:0,102,1635	0/0:34,0:34:81.28:0,81,1332	0/0:37,0:37:84.27:0,84,1352	0/0:40,0:40:84.26:0,84,1350	0/0:20,0:20:45.15:0,45,733	0/0:20,0:20:39.11:0,39,591	0/0:19,0:19:51.17:0,51,823	0/0:48,0:48:99:0,108,1692	0/0:18,0:18:45.15:0,45,746	0/0:17,0:17:39.12:0,39,617	0/0:33,0:33:63.20:0,63,1008	0/0:16,0:16:36.12:0,36,592	0/0:29,0:29:66.23:0,66,1094	0/0:20,0:20:54.18:0,54,868	0/0:8,0:8:24.08:0,24,387
chr10	76924076	.	A	ACT	1399.90	PASS	AB=0.500;AC=47;AF=0.904;AN=52;BaseQRankSum=2.210;DP=113;FS=0.000;HRun=0;HaplotypeScore=167.9050;InbreedingCoeff=0.2346;MQ=28.89;MQ0=0;MQRankSum=-1.369;QD=13.21;ReadPosRankSum=3.083;VQSLOD=2.9777;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,7:8:8.54:81,9,0	1/1:0,1:1:2.92:17,3,0	./.	./.	0/0:0,4:4:0:0,0,1	1/1:0,3:3:8.77:51,9,0	1/1:0,6:6:14.08:81,14,0	0/0:0,2:2:2.04:0,2,6	1/1:0,10:10:27.93:150,28,0	1/1:0,3:3:8.93:64,9,0	0/1:0,3:3:7.57:10,0,8	1/1:0,5:5:13.49:71,13,0	1/1:0,6:6:17.10:92,17,0	1/1:0,5:6:10.47:74,10,0	1/1:0,3:3:8.72:49,9,0	1/1:0,6:6:17.55:101,18,0	1/1:0,2:2:2.92:17,3,0	1/1:0,4:4:11.41:72,11,0	1/1:0,5:5:14.90:107,15,0	1/1:0,8:8:17.56:102,18,0	1/1:0,3:3:1.69:6,2,0	1/1:0,2:2:5.75:30,6,0	1/1:0,3:3:3.01:33,3,0	1/1:0,3:3:5.72:29,6,0	1/1:0,3:3:8.72:49,9,0	1/1:0,5:5:14.89:106,15,0	1/1:0,4:6:13.08:66,13,0	1/1:0,2:2:5.70:31,6,0
chr10	76924079	.	TGGGG	T	461.50	PASS	AB=0.515;AC=45;AF=0.865;AN=52;BaseQRankSum=3.504;DP=114;FS=0.000;HRun=6;HaplotypeScore=176.6626;InbreedingCoeff=0.2906;MQ=28.89;MQ0=0;MQRankSum=0.038;QD=4.35;ReadPosRankSum=2.929;VQSLOD=-0.3934;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,7:8:12.81:39,13,0	1/1:0,1:1:2.74:12,3,0	./.	./.	0/1:0,4:4:0:1,0,0	1/1:0,3:3:6.11:17,6,0	1/1:0,6:6:2.96:15,3,0	1/1:0,2:2:0.89:2,1,0	1/1:0,10:10:19.11:56,19,0	1/1:0,3:3:7.87:33,8,0	1/1:0,3:3:2.50:9,2,0	1/1:0,5:5:9:24,9,0	1/1:0,6:6:8.12:25,8,0	1/1:0,5:6:11.70:35,12,0	1/1:0,3:3:5.89:17,6,0	1/1:0,6:6:12.22:35,12,0	1/1:0,2:2:2.04:6,2,0	1/1:0,4:4:9.31:30,9,0	1/1:0,5:5:12.45:45,12,0	1/1:0,8:8:12.92:41,13,0	0/0:1,3:4:0.28:0,0,9	1/1:0,2:2:3.63:10,4,0	0/0:0,3:3:1.99:0,2,6	0/1:0,3:3:0.83:1,0,4	1/1:0,3:3:5.89:17,6,0	1/1:0,5:5:12.88:51,13,0	0/1:1,4:6:7.31:14,0,7	1/1:0,2:2:5.14:25,5,0
chr10	76924089	.	AT	A	4908.86	PASS	AB=0.500;AC=49;AF=0.942;AN=52;BaseQRankSum=0.929;DP=163;FS=0.000;HRun=2;HaplotypeScore=190.9593;InbreedingCoeff=0.2389;MQ=28.70;MQ0=0;MQRankSum=1.087;QD=30.12;ReadPosRankSum=2.958;VQSLOD=4.4293;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:24.03:286,24,0	1/1:0,1:1:3.01:39,3,0	./.	./.	0/1:0,4:4:0:0,0,0	1/1:0,3:3:9.03:117,9,0	1/1:0,7:7:10.76:187,11,0	1/1:0,20:20:40.91:613,41,0	1/1:0,10:10:30.10:388,30,0	1/1:0,4:4:12.04:156,12,0	0/1:0,3:3:2.51:33,0,3	1/1:0,8:8:21.07:271,21,0	1/1:0,6:6:18.06:233,18,0	1/1:0,7:7:21.07:270,21,0	1/1:0,5:5:15.05:189,15,0	1/1:0,8:8:24.08:311,24,0	1/1:0,6:6:15.01:175,15,0	1/1:0,8:8:24.08:311,24,0	1/1:0,6:6:15.05:194,15,0	1/1:0,10:10:24.08:310,24,0	1/1:0,10:9:5.80:58,6,0	1/1:0,2:2:6.02:78,6,0	0/1:0,3:3:0:0,0,0	1/1:0,5:5:3.14:73,3,0	1/1:0,3:3:9.03:116,9,0	1/1:0,6:6:15.05:194,15,0	1/1:0,6:6:15.05:193,15,0	1/1:0,3:3:9.03:114,9,0
chr10	76924097	.	AG	A	5201.81	PASS	AB=0.500;AC=49;AF=0.942;AN=52;BaseQRankSum=0.644;DP=178;FS=0.000;HRun=2;HaplotypeScore=200.1803;InbreedingCoeff=0.2455;MQ=28.66;MQ0=0;MQRankSum=-0.269;QD=29.22;ReadPosRankSum=3.158;VQSLOD=4.3788;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:21.07:265,21,0	1/1:0,2:2:6.02:75,6,0	./.	./.	0/1:0,4:4:0:0,0,0	1/1:0,3:3:9.03:117,9,0	1/1:0,7:7:12.83:225,13,0	1/1:0,25:25:52.95:769,53,0	1/1:0,12:11:33.11:427,33,0	1/1:0,6:6:12.04:156,12,0	0/1:0,3:3:2.51:33,0,3	1/1:0,8:8:21.07:270,21,0	1/1:0,6:6:18.06:233,18,0	1/1:0,7:7:21.07:271,21,0	1/1:1,5:6:18.04:216,18,0	1/1:0,9:9:27.09:350,27,0	1/1:0,6:6:11.88:155,12,0	1/1:0,8:8:24.08:311,24,0	1/1:0,6:6:15.05:195,15,0	1/1:0,10:10:24.08:307,24,0	1/1:0,10:9:5.83:58,6,0	1/1:0,2:2:6.02:78,6,0	0/1:0,3:3:0:0,0,0	1/1:0,8:8:3.13:73,3,0	1/1:0,3:3:6.02:78,6,0	1/1:0,6:6:18.06:233,18,0	1/1:1,5:6:15.05:192,15,0	1/1:0,3:3:9.03:114,9,0
chr10	76924108	.	TC	T	3227.04	PASS	AB=0.656;AC=47;AF=0.940;AN=50;BaseQRankSum=0.278;DP=168;FS=0.000;HRun=3;HaplotypeScore=188.0754;InbreedingCoeff=0.1644;MQ=28.64;MQ0=0;MQRankSum=-1.602;QD=19.68;ReadPosRankSum=2.397;VQSLOD=2.9375;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,7:8:6.02:75,6,0	1/1:0,2:2:6.02:74,6,0	./.	./.	0/1:4,3:7:0:0,0,0	1/1:0,5:5:6.02:74,6,0	1/1:1,6:7:12.47:132,12,0	1/1:5,17:22:48.15:595,48,0	1/1:2,8:9:18.06:222,18,0	1/1:1,2:3:6.02:74,6,0	0/1:1,2:3:2.51:32,0,3	1/1:0,8:8:15.05:184,15,0	1/1:1,3:4:9.03:111,9,0	1/1:1,5:6:18.06:219,18,0	1/1:1,5:6:12.04:148,12,0	1/1:3,5:8:12.04:148,12,0	1/1:0,5:5:8.89:111,9,0	1/1:0,8:8:21.07:260,21,0	1/1:4,3:7:9.03:110,9,0	1/1:1,7:8:18.06:223,18,0	1/1:0,11:10:8.50:91,9,0	1/1:0,2:2:6.02:74,6,0	0/1:1,1:2:0:0,0,0	1/1:1,7:8:5.91:106,6,0	./.	1/1:1,5:6:15.01:169,15,0	1/1:2,3:5:3.01:37,3,0	1/1:2,1:3:3.01:35,3,0
chr10	76924115	.	AT	A	3520.82	PASS	AB=0.500;AC=48;AF=0.960;AN=50;BaseQRankSum=0.117;DP=144;FS=0.000;HRun=2;HaplotypeScore=153.4867;InbreedingCoeff=0.0614;MQ=28.98;MQ0=0;MQRankSum=-0.791;QD=24.62;ReadPosRankSum=2.372;VQSLOD=3.4331;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,6:8:6.02:78,6,0	1/1:0,2:2:6.02:78,6,0	./.	./.	0/1:0,6:6:0.04:0,0,0	1/1:0,6:6:12.51:157,13,0	1/1:3,4:7:9.03:116,9,0	1/1:2,16:18:48.16:622,48,0	1/1:1,7:7:18.06:232,18,0	1/1:1,1:2:3.01:39,3,0	0/1:0,2:2:2.51:33,0,3	1/1:1,7:8:15.05:193,15,0	1/1:0,3:3:9.03:117,9,0	1/1:0,6:6:18.06:227,18,0	1/1:0,5:5:12.04:155,12,0	1/1:1,5:6:12.04:155,12,0	1/1:0,5:5:8.89:117,9,0	1/1:1,6:7:18.06:233,18,0	1/1:2,3:5:12.02:140,12,0	1/1:2,6:8:18.06:233,18,0	1/1:2,8:9:11.99:136,12,0	1/1:0,3:3:6.49:78,6,0	./.	1/1:0,8:8:6.15:112,6,0	1/1:2,1:3:3.01:39,3,0	1/1:0,4:4:12.04:155,12,0	1/1:1,1:2:3.01:39,3,0	1/1:0,1:1:3.01:36,3,0
chr10	76924134	.	GA	G	1872.82	PASS	AB=0.556;AC=37;AF=0.841;AN=44;BaseQRankSum=0.353;DP=103;FS=0.000;HRun=2;HaplotypeScore=82.4245;InbreedingCoeff=0.2546;MQ=30.65;MQ0=0;MQRankSum=1.519;QD=20.14;ReadPosRankSum=3.299;VQSLOD=3.6262;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:4:3.01:39,3,0	1/1:1,1:2:3.01:39,3,0	./.	./.	0/0:3,1:4:0:0,0,0	1/1:2,5:7:12.04:156,12,0	1/1:0,3:3:9.03:116,9,0	1/1:0,10:10:24:273,24,0	1/1:2,2:3:6.02:78,6,0	./.	0/0:2,0:2:0.47:0,0,1	1/1:0,7:7:18.06:230,18,0	./.	1/1:2,4:6:6.02:78,6,0	1/1:0,5:5:15.05:191,15,0	1/1:0,5:4:9.03:117,9,0	1/1:1,2:3:6.02:78,6,0	1/1:1,5:6:12.04:156,12,0	1/1:1,4:5:12.04:149,12,0	0/0:2,2:4:0.47:0,0,1	1/1:3,2:5:2.79:39,3,0	0/1:1,4:5:0.04:1,0,0	./.	1/1:0,8:8:3.14:73,3,0	1/1:1,3:4:3.01:39,3,0	1/1:1,2:3:8.94:67,9,0	./.	1/1:0,1:1:3.01:33,3,0
chr10	76924151	.	CT	C	5090.01	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=2.871;DP=242;FS=0.000;HRun=5;HaplotypeScore=105.7696;InbreedingCoeff=0.1815;MQ=38.32;MQ0=0;MQRankSum=-0.862;QD=22.23;ReadPosRankSum=4.142;VQSLOD=3.3303;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:9:8.33:101,8,0	1/1:0,5:5:15.04:170,15,0	1/1:1,1:2:3.01:34,3,0	./.	0/0:0,13:13:0.94:0,1,2	1/1:1,12:13:33.09:373,33,0	1/1:0,5:5:15.04:170,15,0	1/1:1,11:12:30.09:340,30,0	1/1:1,10:10:27.08:306,27,0	1/1:0,10:10:30.09:340,30,0	1/1:0,13:13:5.23:66,5,0	1/1:1,15:16:42.12:476,42,0	1/1:0,12:12:27.07:306,27,0	1/1:2,8:10:12.03:136,12,0	1/1:1,7:8:21.06:238,21,0	1/1:0,7:6:15.04:170,15,0	1/1:0,2:2:3.01:34,3,0	1/1:1,3:4:9.03:102,9,0	1/1:1,6:7:15.04:170,15,0	1/1:1,15:16:18.04:204,18,0	1/1:0,1:1:3.01:34,3,0	1/1:3,6:9:4.14:65,4,0	1/1:0,7:7:5.65:67,6,0	1/1:2,6:8:9.02:102,9,0	1/1:1,16:17:36.10:408,36,0	1/1:2,7:9:21.06:238,21,0	1/1:0,11:11:27.07:306,27,0	1/1:1,4:5:12.03:136,12,0
chr10	76924165	.	CT	C	2716.26	PASS	AB=0.694;AC=52;AF=0.929;AN=56;BaseQRankSum=1.183;DP=235;FS=6.217;HRun=3;HaplotypeScore=103.7180;InbreedingCoeff=0.3043;MQ=64.88;MQ0=0;MQRankSum=-3.085;QD=11.91;ReadPosRankSum=3.759;VQSLOD=2.0633;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,6:7:14.26:79,14,0	1/1:0,5:5:14.14:78,14,0	0/0:7,0:7:1.97:0,2,28	0/1:4,1:5:5.84:6,0,48	1/1:2,13:15:5.84:49,6,0	1/1:2,9:11:20.52:109,21,0	1/1:1,6:7:15.63:70,16,0	1/1:5,7:12:20.29:111,20,0	1/1:0,10:9:25.62:167,26,0	1/1:4,7:11:26.30:181,26,0	1/1:1,11:12:25.08:134,25,0	1/1:2,13:15:37.73:294,38,0	1/1:1,12:13:34.23:171,34,0	1/1:0,7:7:16.56:77,17,0	1/1:0,7:7:19.33:96,19,0	1/1:0,7:6:14.44:93,14,0	1/1:0,1:1:2.80:13,3,0	1/1:1,1:2:3.01:37,3,0	1/1:1,5:6:17.50:145,17,0	1/1:2,13:15:29.66:124,30,0	1/1:1,1:2:1.25:3,1,0	1/1:1,5:6:16.73:109,17,0	1/1:1,6:7:11.95:118,12,0	1/1:1,6:7:16.46:95,16,0	1/1:0,15:15:38.04:167,38,0	1/1:0,6:6:16.99:83,17,0	1/1:0,12:12:33.51:170,34,0	0/1:1,4:5:8.22:49,0,8
chr10	76924171	.	A	AG	4477.88	PASS	AB=0.887;AC=54;AF=0.964;AN=56;BaseQRankSum=1.720;DP=244;FS=4.167;HRun=2;HaplotypeScore=108.3116;InbreedingCoeff=-0.0555;MQ=73.56;MQ0=0;MQRankSum=-4.672;QD=18.35;ReadPosRankSum=2.579;VQSLOD=5.2089;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,5:6:14.82:99,15,0	1/1:1,7:8:20.82:168,21,0	0/1:10,1:11:35.71:36,0,60	0/1:5,1:6:22.68:23,0,51	1/1:1,13:14:20.46:179,20,0	1/1:1,9:10:22.94:142,23,0	1/1:1,8:9:23.68:198,24,0	1/1:3,10:13:27:283,27,0	1/1:1,9:9:23.81:184,24,0	1/1:3,7:10:26.96:255,27,0	1/1:1,12:13:32.61:259,33,0	1/1:3,11:14:32.71:260,33,0	1/1:1,12:13:38.26:265,38,0	1/1:0,7:7:17.74:115,18,0	1/1:1,6:7:17.74:113,18,0	1/1:0,7:6:14.87:104,15,0	1/1:0,1:1:2.98:21,3,0	1/1:1,0:1:3:26,3,0	1/1:3,4:7:17.96:185,18,0	1/1:3,13:16:38.57:299,39,0	1/1:1,1:2:3.01:43,3,0	1/1:1,5:6:17.84:156,18,0	1/1:2,5:7:11.94:139,12,0	1/1:2,5:7:14.82:115,15,0	1/1:1,14:15:41.43:268,41,0	1/1:0,6:6:17.89:130,18,0	1/1:0,13:13:38.66:299,39,0	1/1:1,4:5:12:115,12,0
chr10	76924321	.	T	TG	535.59	PASS	AC=42;AF=0.913;AN=46;BaseQRankSum=-3.232;DP=75;FS=0.000;HRun=0;HaplotypeScore=26.6898;InbreedingCoeff=0.3228;MQ=79.32;MQ0=0;MQRankSum=-3.257;QD=8.12;ReadPosRankSum=-0.388;VQSLOD=3.0329;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,4:6:15.16:61,15,0	./.	0/0:3,0:3:3.85:0,4,22	0/0:3,0:3:2.11:0,2,40	./.	1/1:1,1:2:4.41:14,4,0	1/1:0,5:5:10.19:43,10,0	1/1:1,3:4:11.33:75,11,0	1/1:0,2:2:1.82:5,2,0	1/1:0,1:1:2.37:8,2,0	1/1:0,1:1:2.04:6,2,0	1/1:0,2:2:5.80:31,6,0	1/1:2,1:3:6.75:22,7,0	1/1:0,3:3:3.85:18,4,0	1/1:0,2:2:4.07:13,4,0	./.	1/1:2,1:3:1.98:7,2,0	1/1:1,1:2:5.96:44,6,0	1/1:3,7:10:23.58:155,24,0	1/1:0,3:3:7.56:29,8,0	1/1:1,2:3:2.20:7,2,0	./.	1/1:0,1:1:2.04:6,2,0	1/1:1,2:3:4.83:18,5,0	1/1:0,1:1:2.22:7,2,0	1/1:1,3:4:7.11:24,7,0	1/1:1,4:5:11.73:43,12,0	./.
chr10	76924324	.	GT	G	1157.18	PASS	AB=0.800;AC=43;AF=0.935;AN=46;BaseQRankSum=-2.906;DP=85;FS=3.171;HRun=4;HaplotypeScore=25.0144;InbreedingCoeff=0.1716;MQ=81.98;MQ0=0;MQRankSum=-3.934;QD=15.03;ReadPosRankSum=0.829;VQSLOD=1.8859;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,5:7:20.58:150,21,0	./.	0/1:3,1:4:25.97:26,0,89	0/0:3,0:3:9.03:0,9,104	./.	1/1:0,3:3:5.98:49,6,0	1/1:0,5:5:11.52:81,12,0	1/1:1,3:4:11.60:63,12,0	1/1:1,2:3:6.01:63,6,0	1/1:0,1:1:2.60:10,3,0	1/1:0,1:1:3:27,3,0	1/1:0,2:2:5.88:37,6,0	1/1:2,1:3:8.75:66,9,0	1/1:0,3:3:7.18:33,7,0	1/1:1,2:3:9:78,9,0	./.	1/1:0,4:4:5.99:49,6,0	1/1:2,1:3:8.77:67,9,0	1/1:1,9:10:24.50:150,25,0	1/1:0,3:3:8.52:55,9,0	1/1:1,2:3:3:27,3,0	./.	1/1:0,1:1:3:27,3,0	1/1:2,2:4:5.63:30,6,0	1/1:0,1:1:3:27,3,0	1/1:0,4:4:10.77:51,11,0	1/1:1,4:5:14.25:96,14,0	./.
chr10	76924325	.	T	TG	3129.28	PASS	AB=1.000;AC=45;AF=0.938;AN=48;BaseQRankSum=-3.601;DP=107;FS=3.967;HRun=1;HaplotypeScore=24.4703;InbreedingCoeff=0.1944;MQ=78.63;MQ0=0;MQRankSum=-4.014;QD=31.29;ReadPosRankSum=0.058;VQSLOD=3.0376;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:24.06:328,24,0	./.	0/1:5,0:5:25.97:26,0,103	0/0:3,0:3:9.02:0,9,93	./.	1/1:3,0:3:6.02:93,6,0	1/1:6,0:6:15.01:182,15,0	1/1:4,2:6:18.03:225,18,0	1/1:3,0:3:6.02:83,6,0	1/1:1,0:1:3.01:47,3,0	1/1:2,0:2:6.02:92,6,0	1/1:2,0:2:6.02:72,6,0	1/1:2,2:4:12.02:162,12,0	1/1:3,0:3:8.98:82,9,0	1/1:3,0:3:9.02:116,9,0	1/1:2,0:2:3.01:37,3,0	1/1:5,0:5:8.75:116,9,0	1/1:3,0:3:9:86,9,0	1/1:12,0:12:35.88:426,36,0	1/1:3,0:3:9.03:125,9,0	1/1:4,0:4:2.99:46,3,0	./.	1/1:1,0:1:3.01:46,3,0	1/1:3,3:6:9.03:129,9,0	1/1:2,0:2:6.02:92,6,0	1/1:8,0:8:24.08:376,24,0	1/1:7,0:7:18.06:250,18,0	./.
chr10	76924512	.	T	TAC	2469.72	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=-8.895;DP=437;FS=35.394;HRun=0;HaplotypeScore=50.7910;InbreedingCoeff=0.7318;MQ=68.74;MQ0=3;MQRankSum=1.350;QD=31.26;ReadPosRankSum=1.909;VQSLOD=2.2045;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:39.13:751,39,0	0/1:9,0:9:1.52:2,0,234	0/1:8,0:5:15.13:15,0,16	0/0:10,0:7:11.97:0,12,119	1/1:0,20:20:36.12:693,36,0	0/0:16,0:16:45.11:0,45,624	0/0:11,0:11:30.10:0,30,456	0/0:42,0:42:99:0,117,1610	0/0:17,0:17:48.15:0,48,712	0/0:17,0:17:42.11:0,42,552	0/0:15,0:15:42.14:0,42,641	0/0:15,0:15:45.15:0,45,687	0/0:11,0:11:33.06:0,33,476	0/0:21,0:21:51.13:0,51,714	0/0:19,0:19:48.15:0,48,705	0/0:13,0:13:33.10:0,33,480	0/0:19,0:19:45.07:0,45,636	0/0:20,0:20:60.11:0,60,824	0/0:16,0:15:42.07:0,42,528	0/0:15,0:15:45.12:0,45,641	0/0:18,0:18:54.15:0,54,781	0/0:4,0:4:12.03:0,12,162	0/0:6,0:6:15.04:0,15,208	0/0:7,0:7:18.06:0,18,273	1/1:0,21:22:60.21:1157,60,0	0/0:19,0:19:57.15:0,57,844	0/0:24,0:24:63.07:0,63,817	0/0:3,0:3:9.01:0,9,115
chr10	76925868	.	GA	G	471.71	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.025;DP=627;FS=5.621;HRun=11;HaplotypeScore=60.1000;InbreedingCoeff=0.8956;MQ=60.39;MQ0=9;MQRankSum=0.424;QD=14.29;ReadPosRankSum=1.354;VQSLOD=3.9432;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:68.92:567,69,0	0/0:14,0:14:11.53:0,12,322	0/0:11,0:4:8.60:0,9,68	0/0:18,0:9:19.53:0,20,155	0/0:33,0:32:75.18:0,75,794	0/0:27,1:28:24.45:0,24,651	0/0:20,0:20:54.14:0,54,574	0/0:27,0:29:65:0,65,682	0/0:17,0:17:48.07:0,48,490	0/0:15,0:16:32.95:0,33,334	0/0:21,0:21:48.11:0,48,504	0/0:21,0:21:39.10:0,39,416	0/0:16,0:17:47.93:0,48,477	0/0:17,0:17:32.83:0,33,351	0/0:26,1:27:41.56:0,42,643	0/0:22,3:25:35.47:0,35,566	0/0:37,1:37:77.61:0,78,1030	0/0:32,0:31:56.25:0,56,752	0/0:30,0:29:19.74:0,20,581	0/0:28,0:28:70.40:0,70,728	0/0:12,0:13:20.66:0,21,206	0/0:20,0:20:50.60:0,51,521	0/0:15,0:16:32.92:0,33,333	0/0:19,0:18:51.13:0,51,543	0/0:23,0:23:57.14:0,57,607	0/0:20,0:19:44.98:0,45,462	0/0:23,0:23:53.94:0,54,547	0/0:15,0:15:36.05:0,36,366
chr10	76926275	.	T	TTGTA	2235.74	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=1.319;DP=904;FS=3.418;HRun=0;HaplotypeScore=150.7919;InbreedingCoeff=0.7460;MQ=66.31;MQ0=9;MQRankSum=-1.098;QD=9.98;ReadPosRankSum=-4.052;VQSLOD=2.3294;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:68.53:0,69,946	0/0:17,0:17:21.05:0,21,278	0/1:17,0:11:0:0,0,0	./.	0/1:32,0:31:13.40:312,0,13	0/0:33,0:34:72.12:0,72,965	0/0:34,0:34:39.08:0,39,512	1/1:38,0:35:23.51:144,24,0	0/0:34,0:34:66.09:0,66,873	0/0:40,0:40:37.15:0,37,849	0/0:18,0:19:30.02:0,30,411	0/0:38,0:38:57.10:0,57,745	0/0:36,0:36:69.18:0,69,993	0/0:38,0:38:57.17:0,57,825	0/0:39,0:39:75.12:0,75,985	0/0:36,0:36:84.15:0,84,1105	0/0:28,0:28:33.02:0,33,430	1/1:16,16:33:18.06:422,18,0	0/0:22,0:22:12.04:0,12,186	0/0:29,0:30:36.05:0,36,467	0/0:57,0:63:25.78:0,26,1122	0/0:20,0:20:39.07:0,39,531	1/1:8,11:19:11.96:281,12,0	1/1:21,28:51:33.11:775,33,0	0/1:34,0:34:6.44:464,0,6	0/0:38,0:38:62.87:0,63,738	0/0:19,0:18:33.11:0,33,505	0/0:23,0:23:39.08:0,39,544
chr10	76926676	.	G	GCT	24011.32	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-14.061;DP=637;FS=1.095;HRun=0;HaplotypeScore=69.5247;InbreedingCoeff=0.9997;MQ=82.13;MQ0=0;MQRankSum=-4.108;QD=50.76;ReadPosRankSum=2.507;VQSLOD=5.9984;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:32:90.31:1718,90,0	1/1:0,12:12:36.08:657,36,0	0/0:15,0:15:45.14:0,45,658	0/0:19,0:19:42.13:0,42,577	1/1:1,21:21:56.83:1098,57,0	1/1:1,19:20:51.17:960,51,0	1/1:2,22:24:60.21:1158,60,0	1/1:2,34:36:99:2008,108,0	0/0:13,0:13:39.13:0,39,597	1/1:0,13:14:42.13:780,42,0	1/1:2,15:18:36.12:674,36,0	0/0:30,0:30:90.29:0,90,1353	0/0:23,0:23:69.23:0,69,1057	1/1:1,19:22:60.21:1139,60,0	1/1:2,25:27:72.25:1391,72,0	1/1:1,13:14:33.11:638,33,0	1/1:2,40:42:99:2202,114,0	1/1:1,35:36:99:1913,99,0	1/1:2,23:25:75.26:1398,75,0	1/1:2,19:23:56.69:1062,57,0	1/1:3,28:32:84.29:1623,84,0	0/0:19,0:19:53.71:0,54,762	0/0:19,0:19:54.18:0,54,827	0/0:26,0:26:72.20:0,72,1074	1/1:2,19:21:51.17:985,51,0	1/1:2,18:20:57.15:1063,57,0	1/1:1,19:21:54.18:1022,54,0	1/1:1,9:10:27.09:522,27,0
chr10	76928080	.	ATC	A	1164.30	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.172;DP=689;FS=3.453;HRun=0;HaplotypeScore=81.7963;InbreedingCoeff=0.9997;MQ=79.84;MQ0=0;MQRankSum=-3.209;QD=36.38;ReadPosRankSum=1.206;VQSLOD=6.0151;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,2397	0/0:13,0:13:36.12:0,36,695	0/0:15,0:15:38.93:0,39,557	0/0:20,0:21:42.37:0,42,656	1/1:0,15:15:39.13:597,39,0	0/0:21,0:21:63.20:0,63,1172	0/0:40,0:40:99:0,120,2230	0/0:19,0:19:51.16:0,51,915	0/0:28,0:28:81.28:0,81,1556	0/0:19,0:19:57.19:0,57,1060	0/0:15,0:15:42.14:0,42,811	0/0:34,0:34:99:0,99,1860	0/0:31,0:31:90.26:0,90,1610	0/0:39,0:39:99:0,117,2223	0/0:34,0:33:99:0,102,1944	0/0:25,0:25:75.23:0,75,1381	0/0:26,0:26:78.25:0,78,1472	0/0:16,0:16:48.16:0,48,927	0/0:21,0:21:63.17:0,63,1167	0/0:24,0:24:60.21:0,60,1159	0/0:42,0:42:99:0,120,2275	0/0:12,0:12:36.11:0,36,662	0/0:23,0:23:69.24:0,69,1330	0/0:33,0:33:93.32:0,93,1796	1/1:1,16:17:45.15:689,45,0	0/0:32,0:32:96.33:0,96,1848	0/0:18,0:18:54.16:0,54,997	0/0:14,0:14:42.06:0,42,702
chr10	76928638	.	GA	G	9043.47	PASS	AB=0.909;AC=41;AF=0.732;AN=56;BaseQRankSum=10.077;DP=611;FS=10.662;HRun=10;HaplotypeScore=71.6912;InbreedingCoeff=0.8974;MQ=79.87;MQ0=1;MQRankSum=-2.409;QD=19.08;ReadPosRankSum=2.523;VQSLOD=5.2737;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:27:71.98:625,72,0	1/1:2,12:14:35.99:313,36,0	0/1:18,2:19:31.05:31,0,139	0/0:24,1:24:13:0,13,306	1/1:1,0:40:59.03:174,59,0	1/1:3,20:23:59.89:511,60,0	1/1:2,15:17:44.98:391,45,0	1/1:2,17:19:50.98:443,51,0	0/0:16,0:16:42.11:0,42,465	1/1:2,25:27:74.95:643,75,0	1/1:1,19:20:47.97:417,48,0	0/0:17,0:17:45.12:0,45,498	0/0:27,0:28:80.83:0,81,824	1/1:0,17:17:47.99:417,48,0	1/1:6,30:36:86.95:755,87,0	1/1:5,19:24:26.79:462,27,0	1/1:2,32:34:86.97:755,87,0	1/1:6,26:32:25.67:550,26,0	1/1:2,5:7:14.99:130,15,0	1/1:5,22:27:62.94:546,63,0	1/1:0,14:14:35.99:313,36,0	0/0:12,0:13:35.92:0,36,372	0/0:21,2:23:14.11:0,14,576	0/0:15,0:14:33.09:0,33,365	1/1:2,0:13:24.92:73,25,0	1/1:2,21:23:62.95:541,63,0	1/1:1,19:20:56.99:495,57,0	1/1:1,19:20:53.94:462,54,0
chr10	76928732	.	GA	G	1532.99	PASS	AB=0.906;AC=8;AF=0.143;AN=56;BaseQRankSum=7.841;DP=592;FS=0.917;HRun=11;HaplotypeScore=63.1084;InbreedingCoeff=0.7316;MQ=68.49;MQ0=2;MQRankSum=-0.548;QD=11.36;ReadPosRankSum=0.529;VQSLOD=3.1399;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:25:59.92:493,60,0	0/0:17,0:19:44.08:0,44,473	0/0:21,0:16:17.92:0,18,158	0/0:8,0:5:8.87:0,9,69	1/1:12,25:37:51.89:633,52,0	0/0:23,0:23:54.14:0,54,575	0/1:17,2:19:1.24:1,0,384	0/0:33,0:34:59.98:0,60,616	0/0:14,0:14:39.10:0,39,416	0/1:26,3:29:32.07:32,0,488	0/0:28,2:31:30.04:0,30,746	0/0:14,1:15:11.42:0,11,313	0/0:23,1:24:33.36:0,33,537	0/0:18,0:18:39.10:0,39,416	0/0:19,0:19:51.13:0,51,543	0/0:15,0:15:39.10:0,39,416	0/0:30,0:30:69.16:0,69,728	0/0:23,1:25:36.61:0,37,561	0/0:21,0:21:48.07:0,48,494	0/0:30,0:31:68.15:0,68,731	0/0:12,0:12:36.08:0,36,377	0/0:6,0:6:18.05:0,18,192	0/0:17,1:18:20.46:0,20,417	0/0:18,0:19:50.96:0,51,526	1/1:1,22:25:64.96:523,65,0	0/0:19,0:19:51.13:0,51,543	0/0:21,0:21:49.36:0,49,508	0/0:14,0:14:21.04:0,21,217
chr10	76930091	.	T	TAC	1247.52	PASS	AB=0.902;AC=28;AF=0.538;AN=52;BaseQRankSum=-1.946;DP=556;FS=4.968;HRun=0;HaplotypeScore=90.4279;InbreedingCoeff=-0.0782;MQ=61.58;MQ0=5;MQRankSum=1.037;QD=3.07;ReadPosRankSum=-0.897;VQSLOD=1.4237;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:32:5.99:49,6,0	0/1:11,6:17:5.68:14,0,6	./.	./.	1/1:9,0:13:8.90:96,9,0	0/1:23,0:22:44.92:45,0,105	0/1:29,0:29:60.06:60,0,104	1/1:19,0:19:2.96:19,3,0	0/1:15,0:15:8.96:9,0,75	0/1:12,0:13:24.73:25,0,56	1/1:10,1:11:1.24:41,1,0	0/0:16,0:16:9.02:0,9,96	0/0:13,0:13:12.01:0,12,116	1/1:17,9:27:6.02:84,6,0	0/1:21,0:22:52.74:53,0,56	0/1:15,5:19:22.84:79,0,23	0/1:24,1:24:74.13:131,0,74	0/0:7,0:13:5.68:0,6,28	1/1:20,0:19:3:27,3,0	1/1:11,6:17:7.95:121,8,0	0/1:31,1:32:8.65:217,0,9	0/0:18,0:18:8.18:0,8,112	0/0:17,0:18:6.01:0,6,64	0/0:26,0:27:30.04:0,30,308	1/1:9,1:18:5.99:50,6,0	0/1:15,5:21:6.13:132,0,6	0/1:17,1:19:34.16:71,0,34	0/1:5,6:11:49.03:84,0,49
chr10	76932283	.	TG	T	13522.56	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=10.131;DP=707;FS=2.833;HRun=7;HaplotypeScore=71.4078;InbreedingCoeff=0.9999;MQ=83.14;MQ0=0;MQRankSum=-4.580;QD=26.26;ReadPosRankSum=2.621;VQSLOD=5.7594;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,27:34:69.15:704,69,0	1/1:0,17:17:51.12:520,51,0	0/0:27,0:27:66.19:0,66,789	0/0:15,0:15:32.95:0,33,363	1/1:3,25:28:75.17:765,75,0	1/1:6,23:29:69.15:704,69,0	1/1:3,18:21:54.12:551,54,0	1/1:4,35:39:99:1051,105,0	0/0:33,0:33:87.25:0,87,1058	1/1:1,23:24:66.15:673,66,0	1/1:3,10:13:36.08:367,36,0	0/0:28,0:28:78.25:0,78,981	0/0:30,0:30:90.29:0,90,1132	1/1:1,18:19:54.12:551,54,0	1/1:2,27:29:78.18:795,78,0	1/1:6,20:26:50.85:520,51,0	1/1:1,25:26:69.16:704,69,0	1/1:2,18:20:48.11:490,48,0	1/1:4,18:22:54.11:545,54,0	1/1:1,19:20:51.11:520,51,0	1/1:5,36:41:96.22:980,96,0	0/0:19,0:19:45.14:0,45,566	0/0:12,0:12:33.09:0,33,401	0/0:28,0:28:46.56:0,47,735	1/1:1,21:22:63.14:642,63,0	1/1:2,35:37:99:1064,105,0	1/1:2,28:30:81.18:826,81,0	1/1:0,18:18:54.12:551,54,0
chr10	76932290	.	GT	G	2144.85	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=16.472;DP=690;FS=3.503;HRun=1;HaplotypeScore=108.1929;InbreedingCoeff=0.4682;MQ=84.83;MQ0=0;MQRankSum=-6.225;QD=4.21;ReadPosRankSum=7.952;VQSLOD=0.2960;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:30.71:109,0,31	1/1:17,0:17:38.55:143,39,0	0/0:26,0:26:78.18:0,78,1050	0/0:19,0:19:50.85:0,51,632	1/1:27,0:27:21.41:209,21,0	1/1:24,0:24:26.24:112,26,0	0/1:21,0:21:27.98:70,0,28	0/1:41,0:41:69.23:69,0,100	0/0:30,0:30:87.25:0,87,1215	0/1:26,0:26:26.83:79,0,27	1/1:11,2:13:5.75:101,6,0	0/0:28,0:28:84.26:0,84,1179	0/0:32,0:32:95.34:0,95,1340	0/1:20,0:20:1.84:94,0,2	1/1:29,1:30:16.01:156,16,0	0/1:23,0:23:27.33:80,0,27	1/1:26,0:26:30.09:137,30,0	1/1:18,0:18:33.69:99,34,0	0/1:23,0:23:26.40:26,0,93	1/1:21,0:21:22.27:112,22,0	1/1:38,0:38:27.49:152,27,0	0/0:16,0:16:48.15:0,48,675	0/0:10,0:10:30.10:0,30,428	0/0:20,0:20:58.08:0,58,832	1/1:22,1:23:25.85:183,26,0	1/1:35,0:35:54.98:159,55,0	1/1:31,1:32:2.43:162,2,0	1/1:19,0:19:18.82:96,19,0
chr10	76932623	.	CG	C	1101.58	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.075;DP=783;FS=3.139;HRun=4;HaplotypeScore=79.2665;InbreedingCoeff=0.9992;MQ=85.71;MQ0=0;MQRankSum=-0.040;QD=25.62;ReadPosRankSum=0.463;VQSLOD=2.4526;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,177,2400	0/0:16,0:16:48.12:0,48,649	0/0:25,0:25:67.46:0,67,791	0/0:26,0:26:65.55:0,66,761	1/1:1,31:32:72.22:863,72,0	0/0:23,0:23:66.22:0,66,923	0/0:28,0:28:81.22:0,81,1080	0/0:34,0:34:96.23:0,96,1256	0/0:30,0:30:81.26:0,81,1114	0/0:39,0:39:99:0,114,1520	0/0:20,0:20:57.16:0,57,748	0/0:39,0:39:99:0,111,1518	0/0:21,0:21:60.19:0,60,822	0/0:17,0:17:48.15:0,48,654	0/0:36,0:36:99:0,108,1478	0/0:28,0:28:78.23:0,78,1054	0/0:31,0:31:90.28:0,90,1233	0/0:22,0:22:63.19:0,63,864	0/0:26,0:26:69.22:0,69,948	0/0:28,0:28:72.14:0,72,929	0/0:48,0:48:99:0,138,1880	0/0:24,0:24:72.23:0,72,986	0/0:16,0:16:42.14:0,42,584	0/0:32,0:32:96.30:0,96,1323	1/1:0,11:11:30.09:360,30,0	0/0:42,0:42:99:0,111,1487	0/0:17,0:17:48.14:0,48,653	0/0:9,0:9:27.09:0,27,378
chr10	76932923	.	GAGA	G	18297.07	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=13.820;DP=783;FS=4.100;HRun=0;HaplotypeScore=128.9090;InbreedingCoeff=0.9993;MQ=69.54;MQ0=0;MQRankSum=-6.016;QD=41.12;ReadPosRankSum=2.261;VQSLOD=6.4642;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,2900	1/1:0,11:11:30.10:494,30,0	0/0:36,0:34:65.14:0,65,1646	0/0:39,0:34:49.34:0,49,1283	0/0:30,0:30:84.28:0,84,1894	1/1:0,32:32:87.30:1483,87,0	1/1:0,28:28:78.22:1296,78,0	1/1:0,28:28:84.24:1323,84,0	0/0:23,0:23:69.15:0,69,1399	1/1:2,23:25:72.14:1136,72,0	1/1:1,22:23:48.16:818,48,0	0/0:23,0:23:60.19:0,60,1337	0/0:31,0:31:93.30:0,93,2096	1/1:0,30:30:75.26:1252,75,0	1/1:2,20:22:42.14:663,42,0	1/1:0,20:20:45.15:754,45,0	1/1:1,36:37:96.33:1637,96,0	1/1:0,28:28:63.21:1061,63,0	1/1:0,19:20:57.12:888,57,0	1/1:1,24:25:60.21:1011,60,0	1/1:0,39:39:81.28:1381,81,0	0/0:23,0:23:69.20:0,69,1456	0/0:27,0:27:78.25:0,78,1692	0/0:34,0:34:99:0,102,2242	0/0:25,0:25:75.26:0,75,1720	1/1:1,29:30:87.19:1344,87,0	1/1:0,31:31:84.24:1400,84,0	1/1:0,16:16:21.07:356,21,0
chr10	76933583	.	T	TC	1400.53	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.658;DP=492;FS=1.462;HRun=1;HaplotypeScore=52.2728;InbreedingCoeff=0.9967;MQ=86.28;MQ0=0;MQRankSum=1.112;QD=40.02;ReadPosRankSum=-0.075;VQSLOD=3.9286;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.30:0,90,1252	0/0:9,0:9:27.08:0,27,361	0/0:21,0:21:63.15:0,63,820	0/0:18,0:18:45.14:0,45,613	1/1:0,19:19:54.18:863,54,0	0/0:24,0:24:72.24:0,72,1006	0/0:18,0:18:48.07:0,48,625	0/0:38,0:38:99:0,111,1546	0/0:11,0:11:30.10:0,30,420	0/0:17,0:17:48.16:0,48,658	0/0:12,0:12:36.12:0,36,504	0/0:12,0:12:33.11:0,33,460	0/0:9,0:9:27.09:0,27,376	0/0:13,0:12:36.06:0,36,464	0/0:15,0:15:42.14:0,42,588	0/0:10,0:10:24.08:0,24,336	0/0:25,0:25:75.25:0,75,1047	0/0:21,0:20:60.20:0,60,839	0/0:28,0:28:81.20:0,81,1084	0/0:14,0:14:42.14:0,42,587	0/0:22,0:22:63.64:0,64,860	0/0:10,0:10:30.10:0,30,419	0/0:10,0:10:30.10:0,30,420	0/0:19,0:19:51.17:0,51,709	1/1:1,15:16:42.14:659,42,0	0/0:18,0:18:54.17:0,54,738	0/0:17,0:17:45.11:0,45,607	0/0:13,0:13:39.13:0,39,545
chr10	76933720	.	CT	C	1327.50	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.670;DP=455;FS=23.497;HRun=1;HaplotypeScore=44.9689;InbreedingCoeff=0.9845;MQ=69.94;MQ0=0;MQRankSum=0.990;QD=34.04;ReadPosRankSum=1.716;VQSLOD=1.8143;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.20:0,60,952	0/0:14,0:14:42.09:0,42,640	0/0:8,0:8:24.06:0,24,351	0/0:6,0:6:18.06:0,18,272	1/1:0,30:30:84.28:1166,84,0	0/0:26,0:26:78.23:0,78,1174	0/0:10,0:10:30.10:0,30,477	0/0:30,0:30:87.25:0,87,1268	0/0:8,0:8:24.08:0,24,383	0/0:18,0:18:54.18:0,54,863	0/0:15,0:15:45.15:0,45,698	0/0:8,0:8:24.03:0,24,354	0/0:10,0:10:30.09:0,30,444	0/0:10,0:10:30.10:0,30,479	0/0:24,0:24:72.23:0,72,1126	0/0:19,0:19:57.09:0,57,810	0/0:11,0:11:33.11:0,33,527	0/0:22,0:22:63.15:0,63,952	0/0:27,0:27:81.25:0,81,1230	0/0:21,0:21:63.20:0,63,979	0/0:8,0:8:24.06:0,24,359	0/0:6,0:6:18.06:0,18,288	0/0:15,0:15:42.13:0,42,636	0/0:12,0:12:36.05:0,36,519	1/1:0,9:9:21.07:282,21,0	0/0:20,0:20:60.20:0,60,955	0/0:29,0:29:87.24:0,87,1347	0/0:19,0:19:57.19:0,57,909
chr10	76934265	.	GC	G	455.22	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.736;DP=741;FS=16.919;HRun=1;HaplotypeScore=78.8493;InbreedingCoeff=0.9991;MQ=84.67;MQ0=0;MQRankSum=-3.318;QD=10.12;ReadPosRankSum=0.470;VQSLOD=0.1066;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,1865	0/0:9,0:9:27.09:0,27,430	0/0:26,0:26:75.25:0,75,1177	0/0:27,0:27:81.28:0,81,1281	1/1:11,10:21:30.07:253,30,0	0/0:25,0:25:75.26:0,75,1196	0/0:34,0:34:99:0,102,1599	0/0:32,0:32:96.32:0,96,1515	0/0:17,0:17:51.17:0,51,815	0/0:30,0:30:90.31:0,90,1440	0/0:15,0:15:45.15:0,45,719	0/0:21,0:21:63.19:0,63,958	0/0:14,0:14:42.14:0,42,669	0/0:16,0:16:48.16:0,48,767	0/0:13,0:13:39.13:0,39,621	0/0:29,0:29:87.28:0,87,1366	0/0:36,0:35:99:0,108,1725	0/0:37,0:36:99:0,111,1726	0/0:23,0:23:69.22:0,69,1047	0/0:26,0:26:78.27:0,78,1247	0/0:65,0:65:99:0,193,3065	0/0:27,0:27:81.28:0,81,1284	0/0:21,0:21:63.21:0,63,999	0/0:35,0:35:99:0,105,1675	1/1:12,12:24:38.77:323,39,0	0/0:32,0:32:93.29:0,93,1407	0/0:23,0:23:69.24:0,69,1093	0/0:21,0:21:63.21:0,63,1007
chr10	76934268	.	A	AG	778.94	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.773;DP=751;FS=13.434;HRun=0;HaplotypeScore=83.2525;InbreedingCoeff=0.9993;MQ=84.89;MQ0=0;MQRankSum=-3.855;QD=16.23;ReadPosRankSum=-0.666;VQSLOD=5.0168;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,123,1702	0/0:9,0:9:27.09:0,27,377	0/0:28,0:28:78.21:0,78,1023	0/0:27,0:27:75.67:0,76,987	1/1:13,10:23:32.67:358,33,0	0/0:25,0:25:75.25:0,75,1049	0/0:35,0:35:99:0,102,1426	0/0:32,0:32:90.30:0,90,1259	0/0:18,0:18:54.18:0,54,755	0/0:30,0:30:90.30:0,90,1259	0/0:15,0:15:45.15:0,45,626	0/0:22,0:22:66.21:0,66,905	0/0:14,0:14:42.12:0,42,568	0/0:17,0:17:48.16:0,48,670	0/0:14,0:14:39.13:0,39,545	0/0:27,0:27:81.27:0,81,1133	0/0:40,0:39:99:0,114,1591	0/0:38,0:37:99:0,111,1550	0/0:22,0:22:63.21:0,63,881	0/0:26,0:26:78.25:0,78,1073	0/0:65,0:65:99:0,196,2710	0/0:26,0:26:78.26:0,78,1089	0/0:20,0:20:60.20:0,60,839	0/0:36,0:36:99:0,105,1469	1/1:13,12:25:61.31:543,61,0	0/0:27,0:27:81.27:0,81,1133	0/0:24,0:24:72.22:0,72,987	0/0:21,0:21:63.21:0,63,881
chr10	76935980	.	C	CGTA	24524.62	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-15.769;DP=727;FS=2.851;HRun=0;HaplotypeScore=97.8500;InbreedingCoeff=0.9676;MQ=83.77;MQ0=0;MQRankSum=-6.357;QD=55.86;ReadPosRankSum=1.267;VQSLOD=6.8876;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,2270	1/1:0,17:21:48.16:1139,48,0	0/0:26,0:26:75.23:0,75,1326	0/0:21,0:21:54.11:0,54,857	0/0:36,0:36:99:0,105,1896	1/1:0,21:21:51.18:1228,51,0	1/1:3,23:26:48.16:1181,48,0	1/1:5,27:36:99:2336,105,0	0/0:27,0:27:78.24:0,78,1360	1/1:5,24:31:84.29:1931,84,0	1/1:2,15:17:33.11:813,33,0	0/0:36,0:36:99:0,105,1928	0/0:20,0:20:57.20:0,57,1063	1/1:0,31:32:75.26:1833,75,0	1/1:1,31:31:66.23:1613,66,0	1/1:3,21:26:1.26:1273,1,0	1/1:2,22:24:54.19:1329,54,0	1/1:2,24:26:63.22:1524,63,0	1/1:2,18:22:66.17:1446,66,0	1/1:2,18:21:42.14:1035,42,0	1/1:3,36:40:84.29:2045,84,0	0/0:22,0:22:66.19:0,66,1151	0/0:18,0:18:54.18:0,54,987	0/0:17,0:17:51.13:0,51,893	0/0:20,0:20:60.21:0,60,1102	1/1:1,22:23:69.24:1600,69,0	1/1:2,25:30:72.24:1681,72,0	1/1:1,9:10:21.07:517,21,0
chr10	76936447	.	G	GCC	9075.99	PASS	AB=0.632;AC=35;AF=0.625;AN=56;BaseQRankSum=-5.756;DP=592;FS=4.993;HRun=9;HaplotypeScore=85.7574;InbreedingCoeff=0.9155;MQ=80.59;MQ0=1;MQRankSum=-4.355;QD=25.78;ReadPosRankSum=-2.486;VQSLOD=4.2807;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,21:44:52.09:681,52,0	1/1:1,6:7:9.03:132,9,0	0/0:23,0:23:36.18:0,36,420	0/0:27,0:25:38.79:0,39,430	0/0:19,0:19:48.12:0,48,511	1/1:1,15:20:31.82:533,32,0	1/1:8,28:40:85.24:1188,85,0	1/1:3,7:13:29.03:333,29,0	0/0:28,0:29:68.87:0,69,706	0/1:5,7:12:9.09:223,0,9	1/1:1,8:9:21.07:323,21,0	0/0:26,0:26:69.13:0,69,726	0/0:23,0:23:69.17:0,69,734	1/1:6,11:20:44.53:591,45,0	1/1:8,14:23:12.70:577,13,0	1/1:3,13:20:46.62:626,47,0	1/1:1,16:19:35.43:517,35,0	1/1:4,18:21:50.20:742,50,0	1/1:6,6:13:15.01:204,15,0	1/1:4,6:10:18.02:238,18,0	1/1:4,20:29:46.40:578,46,0	0/0:24,0:24:63.15:0,63,670	0/0:19,0:19:48.10:0,48,511	0/0:27,0:27:66.09:0,66,682	0/0:21,0:21:60.15:0,60,639	1/1:8,15:25:50.64:705,51,0	1/1:2,14:15:33.11:507,33,0	1/1:1,7:9:26.58:378,27,0
chr10	76937210	.	CT	C	7006.60	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-2.948;DP=608;FS=27.346;HRun=11;HaplotypeScore=68.8628;InbreedingCoeff=0.9218;MQ=66.46;MQ0=5;MQRankSum=-0.891;QD=18.06;ReadPosRankSum=0.350;VQSLOD=3.7401;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:41:76.82:0,77,400	1/1:2,5:7:14.97:123,15,0	0/0:23,0:14:21.02:0,21,206	0/1:14,0:9:12.74:13,0,54	0/0:8,0:32:71.17:0,71,370	1/1:2,22:25:61.95:499,62,0	1/1:2,9:11:23.97:197,24,0	1/1:7,29:37:82.76:658,83,0	0/0:12,0:12:30.07:0,30,314	1/1:1,18:19:53.93:441,54,0	1/1:3,27:30:73.94:597,74,0	0/0:18,0:18:42.11:0,42,447	0/0:13,0:13:32.95:0,33,326	1/1:1,13:14:29.96:246,30,0	1/1:2,22:24:62.92:517,63,0	1/1:3,20:23:21.95:387,22,0	1/1:9,21:31:52.97:425,53,0	1/1:3,19:22:36.43:423,36,0	1/1:2,18:20:47.91:391,48,0	1/1:3,21:24:62.89:512,63,0	1/1:3,14:17:41.94:345,42,0	0/0:11,0:11:21.04:0,21,216	0/0:17,1:17:20.47:0,20,416	0/0:13,0:13:22.87:0,23,229	0/0:4,0:35:57:0,57,290	1/1:6,18:24:24.87:400,25,0	1/1:7,27:34:47.72:588,48,0	1/1:0,12:12:29.97:246,30,0
chr10	76937691	.	T	TAAG	1474.05	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=0.973;DP=682;FS=0.733;HRun=0;HaplotypeScore=95.4443;InbreedingCoeff=0.6474;MQ=87.43;MQ0=0;MQRankSum=-4.623;QD=26.32;ReadPosRankSum=-0.138;VQSLOD=3.2777;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:30:72.25:1530,72,0	0/0:11,0:11:30.10:0,30,487	0/0:18,0:18:44.87:0,45,683	0/0:29,0:29:78.22:0,78,1175	0/0:28,0:28:75.22:0,75,1197	0/0:34,0:34:96.29:0,96,1515	0/0:24,0:24:57.18:0,57,907	0/0:32,0:32:84.27:0,84,1343	0/0:23,0:23:66.19:0,66,1028	0/0:28,0:29:78.27:0,78,1271	0/0:22,0:22:63.21:0,63,1008	0/0:35,0:35:96.33:0,96,1568	0/0:21,0:21:60.15:0,60,902	0/0:27,0:27:75.26:0,75,1222	0/0:26,0:26:75.21:0,75,1147	0/0:31,0:31:93.30:0,93,1493	0/0:15,0:15:42.13:0,42,662	0/1:26,0:26:49.87:50,0,930	0/0:19,0:19:51.15:0,51,783	0/0:32,0:32:90.29:0,90,1440	0/0:27,0:27:72.25:0,72,1174	0/0:22,0:22:60.19:0,60,956	0/0:20,0:19:57.19:0,57,928	0/0:18,0:18:54.14:0,54,830	0/0:20,0:20:54.15:0,54,832	0/0:29,0:29:84.27:0,84,1328	0/0:23,0:23:66.23:0,66,1078	0/0:11,0:11:33.11:0,33,539
chr10	76938475	.	A	ACT	1842.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.869;DP=469;FS=0.670;HRun=0;HaplotypeScore=52.0946;InbreedingCoeff=0.8919;MQ=75.45;MQ0=0;MQRankSum=0.331;QD=49.80;ReadPosRankSum=1.093;VQSLOD=4.6371;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:37:96.33:1937,96,0	0/0:7,0:7:18.05:0,18,292	0/0:13,0:13:35.99:0,36,471	0/0:7,0:7:6.16:0,6,203	0/0:23,0:23:69.21:0,69,1063	0/0:18,0:18:51.17:0,51,816	0/0:13,0:13:39.12:0,39,611	0/0:27,0:27:81.23:0,81,1242	0/0:14,0:14:42.13:0,42,645	0/0:21,0:21:63.20:0,63,959	0/0:20,0:20:57.13:0,57,869	0/0:14,0:14:42.13:0,42,656	0/0:10,0:10:27.06:0,27,391	0/0:10,0:10:27.06:0,27,388	0/0:15,0:14:42.14:0,42,679	0/0:15,0:15:39.13:0,39,625	0/0:19,0:19:54.15:0,54,809	0/0:14,0:14:39.12:0,39,601	0/0:10,0:10:30.07:0,30,417	0/0:26,0:26:75.20:0,75,1144	0/0:18,0:18:54.18:0,54,875	0/0:23,0:23:63.12:0,63,937	0/0:23,0:23:66.07:0,66,1048	0/0:15,0:15:45.15:0,45,729	0/0:12,0:12:36.12:0,36,563	0/0:20,0:20:57.17:0,57,855	0/0:19,0:19:57.16:0,57,847	0/0:6,0:6:18.01:0,18,220
chr10	76940070	.	C	CCA	1251.71	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.990;DP=572;FS=6.601;HRun=0;HaplotypeScore=68.9633;InbreedingCoeff=0.9874;MQ=76.37;MQ0=0;MQRankSum=-2.309;QD=46.36;ReadPosRankSum=-1.674;VQSLOD=3.8492;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:27:72.25:1347,72,0	0/0:10,0:10:27.08:0,27,378	0/0:10,0:10:18.12:0,18,382	0/0:13,0:13:27.09:0,27,375	0/0:16,0:16:45.15:0,45,656	0/0:24,0:24:69.21:0,69,993	0/0:32,0:32:93.27:0,93,1311	0/0:15,0:15:39.12:0,39,538	0/0:18,0:18:54.18:0,54,792	0/0:21,0:21:63.21:0,63,912	0/0:13,0:13:30.10:0,30,439	0/0:24,0:24:66.22:0,66,972	0/0:26,0:26:78.26:0,78,1149	0/0:18,0:18:51.16:0,51,729	0/0:20,0:20:60.20:0,60,884	0/0:28,0:28:78.25:0,78,1129	0/0:29,0:29:87.27:0,87,1239	0/0:17,0:17:48.16:0,48,707	0/0:18,0:18:48.16:0,48,707	0/0:15,0:15:42.14:0,42,615	0/0:49,0:49:99:0,132,1919	0/0:10,0:10:24.08:0,24,352	0/0:15,0:15:45.15:0,45,663	0/0:18,0:18:48.16:0,48,704	0/0:23,0:23:66.22:0,66,971	0/0:29,0:29:81.27:0,81,1186	0/0:22,0:22:66.20:0,66,943	0/0:12,0:12:36.12:0,36,525
chr10	76940912	.	C	CA	19606.51	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-15.928;DP=666;FS=20.989;HRun=1;HaplotypeScore=62.5141;InbreedingCoeff=0.9987;MQ=76.45;MQ0=0;MQRankSum=-2.267;QD=43.96;ReadPosRankSum=-0.573;VQSLOD=2.6020;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,153,2085	1/1:0,9:9:24.08:383,24,0	0/0:16,0:16:45.14:0,45,614	0/0:15,0:15:29.42:0,29,394	1/1:0,18:18:42.14:671,42,0	1/1:0,26:26:66.23:1055,66,0	1/1:0,27:27:72.25:1151,72,0	1/1:0,30:30:90.29:1394,90,0	0/0:19,0:19:54.17:0,54,737	1/1:1,30:31:81.74:1274,82,0	1/1:0,11:11:30.10:480,30,0	0/0:22,0:22:66.21:0,66,906	0/0:28,0:28:84.28:0,84,1173	1/1:0,29:29:84.29:1341,84,0	1/1:0,20:20:54.18:863,54,0	1/1:1,24:25:66.23:1055,66,0	1/1:0,42:42:99:2014,126,0	1/1:1,25:26:66.23:1055,66,0	1/1:0,22:22:66.23:1055,66,0	1/1:0,15:15:45.15:719,45,0	1/1:0,50:50:99:2030,129,0	0/0:20,0:20:54.14:0,54,753	0/0:10,0:10:27.08:0,27,353	0/0:38,0:38:99:0,114,1587	1/1:2,13:15:42.14:671,42,0	1/1:0,21:21:63.21:1007,63,0	1/1:0,22:22:66.23:1055,66,0	1/1:0,7:7:21.07:335,21,0
chr10	76941699	.	AG	A	1562.21	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.397;DP=733;FS=10.623;HRun=5;HaplotypeScore=71.1486;InbreedingCoeff=0.9976;MQ=81.89;MQ0=0;MQRankSum=-0.880;QD=25.61;ReadPosRankSum=1.311;VQSLOD=2.5919;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.25:0,87,1140	0/0:8,0:8:21.07:0,21,287	0/0:26,0:26:72.10:0,72,820	0/0:21,0:20:37.96:0,38,469	1/1:0,32:32:86.84:935,87,0	0/0:30,0:30:87.24:0,87,1135	0/0:17,0:17:51.16:0,51,681	0/0:32,0:32:75.20:0,75,954	0/0:25,0:25:69.20:0,69,911	0/0:39,0:39:99:0,102,1306	0/0:24,0:24:66.17:0,66,827	0/0:34,0:34:96.32:0,96,1304	0/0:26,0:26:78.25:0,78,1050	0/0:34,0:34:99:0,99,1306	0/0:34,0:34:99:0,99,1305	0/0:41,0:41:99:0,120,1584	0/0:27,0:27:70.13:0,70,953	0/0:30,0:30:90.22:0,90,1158	0/0:22,0:22:66.16:0,66,823	0/0:26,0:26:75.20:0,75,975	0/0:15,0:15:45.15:0,45,613	0/0:29,0:29:81.23:0,81,1060	0/0:24,0:24:72.12:0,72,924	0/0:18,0:18:54.18:0,54,737	1/1:1,28:29:66.19:748,66,0	0/0:24,0:24:71.82:0,72,938	0/0:23,0:22:63.12:0,63,774	0/0:12,0:12:30.10:0,30,410
chr10	76943743	.	C	CAA	874.62	PASS	AB=0.684;AC=3;AF=0.054;AN=56;BaseQRankSum=6.796;DP=684;FS=11.817;HRun=0;HaplotypeScore=130.3012;InbreedingCoeff=0.6439;MQ=60.78;MQ0=14;MQRankSum=-1.946;QD=16.50;ReadPosRankSum=-6.117;VQSLOD=1.4850;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:47.13:0,47,630	0/0:11,0:11:5.95:0,6,378	0/0:17,0:13:28.40:0,28,526	0/0:21,0:16:17.95:0,18,369	0/1:14,12:25:9.01:243,0,9	0/0:21,0:21:27.09:0,27,385	0/0:31,0:30:60.48:0,60,900	0/0:35,0:34:81.58:0,82,1048	0/0:18,0:18:42.10:0,42,608	0/0:26,0:26:52.88:0,53,751	0/0:22,0:22:54.17:0,54,786	0/0:36,0:35:71.79:0,72,986	0/0:19,0:19:34.25:0,34,495	0/0:26,0:26:44.64:0,45,511	0/0:25,0:24:47.48:0,47,641	0/0:29,0:29:48.93:0,49,745	0/0:25,0:25:45.07:0,45,655	0/0:23,0:22:59.92:0,60,823	0/0:20,0:20:54.86:0,55,749	0/0:27,0:27:57.18:0,57,831	0/0:37,0:36:74.09:0,74,1026	0/0:22,0:22:37.01:0,37,507	0/0:24,0:24:43.11:0,43,677	0/0:23,0:23:50.48:0,50,635	1/1:27,0:25:48.54:737,49,0	0/0:29,0:28:72.15:0,72,950	0/0:22,0:22:47.07:0,47,542	0/0:12,0:8:21.02:0,21,292
chr10	76943896	.	G	GA	7830.48	PASS	AB=0.752;AC=19;AF=0.339;AN=56;BaseQRankSum=19.330;DP=766;FS=3.469;HRun=0;HaplotypeScore=131.6623;InbreedingCoeff=-0.5137;MQ=80.50;MQ0=0;MQRankSum=-12.454;QD=13.23;ReadPosRankSum=0.814;VQSLOD=6.1766;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,10:36:99:336,0,763	0/1:10,4:14:99:152,0,337	0/0:25,0:25:75.21:0,75,987	0/0:31,0:31:87.16:0,87,1127	0/1:28,14:42:99:336,0,825	0/1:19,10:29:99:395,0,630	0/1:15,14:29:99:529,0,442	0/1:34,16:50:99:850,0,1005	0/0:16,0:16:48.15:0,48,653	0/1:28,12:40:99:504,0,957	0/1:19,12:31:99:309,0,596	0/0:21,0:21:60.17:0,60,790	0/0:14,0:14:39.13:0,39,545	0/1:16,6:22:99:229,0,485	0/1:15,10:25:99:401,0,552	0/1:21,11:32:99:432,0,687	0/1:15,8:23:99:258,0,442	0/1:17,3:19:86.35:86,0,610	0/1:18,8:26:99:400,0,555	0/1:29,13:42:99:414,0,932	0/1:17,3:20:89.13:89,0,527	0/0:23,0:23:69.22:0,69,941	0/0:23,0:23:66.21:0,66,904	0/0:13,0:13:36.12:0,36,503	0/1:15,18:33:99:714,0,531	0/1:28,18:45:99:820,0,908	0/1:18,14:32:99:575,0,601	0/0:8,0:8:24.08:0,24,335
chr10	76945598	.	TGACCG	T	2110.53	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.288;DP=663;FS=1.420;HRun=0;HaplotypeScore=118.5318;InbreedingCoeff=0.8986;MQ=84.04;MQ0=0;MQRankSum=-4.303;QD=49.08;ReadPosRankSum=2.075;VQSLOD=3.7923;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,40:43:99:2205,99,0	0/0:7,0:7:18.06:0,18,581	0/0:18,0:18:54.18:0,54,1578	0/0:22,0:22:66.19:0,66,1799	0/0:16,0:16:48.16:0,48,1546	0/0:20,0:20:60.21:0,60,1798	0/0:29,0:28:87.30:0,87,2800	0/0:27,0:27:75.26:0,75,2394	0/0:17,0:17:51.18:0,51,1638	0/0:33,0:33:99:0,99,3106	0/0:12,0:12:36.11:0,36,1085	0/0:21,0:21:63.22:0,63,1930	0/0:28,0:28:84.29:0,84,2704	0/0:27,0:27:81.28:0,81,2566	0/0:23,0:23:69.20:0,69,2153	0/0:30,0:30:90.31:0,90,2908	0/0:31,0:31:93.32:0,93,2942	0/0:28,0:28:78.27:0,78,2424	0/0:27,0:27:78.21:0,78,2347	0/0:17,0:17:48.16:0,48,1422	0/0:39,0:39:99:0,117,3706	0/0:20,0:20:57.20:0,57,1785	0/0:15,0:15:45.15:0,45,1391	0/0:41,0:41:99:0,123,3746	0/0:19,0:19:57.20:0,57,1839	0/0:24,0:24:72.24:0,72,2237	0/0:27,0:27:78.27:0,78,2509	0/0:2,0:2:6.02:0,6,194
chr10	76948105	.	C	CA	146.03	PASS	AB=0.710;AC=2;AF=0.036;AN=56;BaseQRankSum=4.069;DP=593;FS=4.007;HRun=0;HaplotypeScore=94.3800;InbreedingCoeff=-0.0383;MQ=74.53;MQ0=5;MQRankSum=-1.612;QD=4.56;ReadPosRankSum=2.118;VQSLOD=3.3246;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,103,1358	0/0:10,0:10:30.05:0,30,338	0/0:36,0:26:68.53:0,69,869	0/0:33,0:25:62.73:0,63,797	0/1:10,4:14:51.91:82,0,52	0/0:14,0:14:33.04:0,33,354	0/0:13,0:13:36.07:0,36,400	0/0:29,0:29:84.96:0,85,1021	0/0:16,0:16:45.14:0,45,613	0/0:24,0:24:69.99:0,70,758	0/0:5,0:5:15.04:0,15,196	0/0:25,0:25:75.21:0,75,1020	0/0:10,0:10:30.10:0,30,419	0/0:24,0:24:47.98:0,48,497	0/0:22,0:22:60.05:0,60,653	0/0:15,0:15:43.86:0,44,428	0/0:36,0:36:90.75:0,91,1049	0/0:36,0:36:99:0,102,1119	0/0:15,0:15:45.08:0,45,562	0/0:15,0:15:39.02:0,39,430	0/0:48,0:46:99:0,105,1224	0/0:18,0:18:42.10:0,42,581	0/0:10,0:10:24.08:0,24,336	0/0:26,0:26:75.22:0,75,1009	0/1:8,10:18:41.09:153,0,41	0/0:17,0:17:48.03:0,48,538	0/0:20,0:20:47.31:0,47,539	0/0:5,0:5:14.88:0,15,148
chr10	76948106	.	CCA	C	336.74	PASS	AB=0.913;AC=7;AF=0.125;AN=56;BaseQRankSum=-1.464;DP=598;FS=0.000;HRun=0;HaplotypeScore=99.4130;InbreedingCoeff=0.1541;MQ=73.67;MQ0=6;MQRankSum=0.851;QD=2.31;ReadPosRankSum=0.875;VQSLOD=1.3401;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,13:39:32.93:362,33,0	0/1:4,1:9:19.82:20,0,90	0/1:35,1:25:15.63:16,0,199	0/0:33,0:25:13.70:0,14,140	0/0:10,0:14:21:0,21,198	0/0:6,0:13:18.01:0,18,176	0/0:6,0:15:26.99:0,27,253	0/0:16,0:27:36.03:0,36,365	0/0:16,0:16:45.10:0,45,665	0/0:7,0:24:50.98:0,51,457	0/0:4,0:5:3:0,3,26	0/1:23,2:25:21.50:21,0,606	0/0:10,0:10:15.05:0,15,232	0/0:7,0:24:24.71:0,25,309	0/0:11,0:23:36:0,36,335	0/0:7,0:16:38.51:0,39,365	0/0:22,1:39:16.19:0,16,426	0/0:17,0:37:72.04:0,72,733	0/0:14,0:16:20.99:0,21,238	0/0:7,0:15:18:0,18,158	0/0:26,0:47:56.99:0,57,535	0/1:14,4:18:42.60:43,0,286	0/0:10,0:10:15.05:0,15,234	0/0:25,1:26:13.31:0,13,610	0/0:8,0:18:30.02:0,30,299	0/0:7,0:17:42.04:0,42,467	0/1:9,1:19:8.03:8,0,201	0/0:4,0:5:8.99:0,9,76
chr10	76948518	.	GA	G	907.22	PASS	AB=0.803;AC=32;AF=0.593;AN=54;BaseQRankSum=-1.387;DP=414;FS=1.479;HRun=14;HaplotypeScore=62.1576;InbreedingCoeff=0.2009;MQ=37.75;MQ0=34;MQRankSum=-2.681;QD=3.02;ReadPosRankSum=0.420;VQSLOD=-0.4936;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,9:21:7.60:82,0,8	1/1:9,2:11:6.65:34,7,0	./.	0/0:9,0:1:0.89:0,1,2	0/0:15,0:14:5.20:0,5,129	0/1:7,5:12:25.87:26,0,31	0/1:10,8:18:6.95:45,0,7	0/1:18,6:24:33.77:34,0,37	0/0:16,1:18:14.90:0,15,116	1/1:10,9:17:4.89:154,5,0	1/1:1,6:7:2.92:20,3,0	0/1:13,1:14:3.01:3,0,82	0/0:8,0:8:9.47:0,9,78	1/1:5,6:11:8.84:57,9,0	1/1:7,3:12:15.42:81,15,0	1/1:4,6:10:8.83:61,9,0	0/1:14,3:15:11.07:69,0,11	1/1:12,2:12:13.02:69,13,0	0/1:16,2:13:18.36:35,0,18	1/1:7,4:11:10.09:64,10,0	1/1:12,0:11:2.95:20,3,0	0/0:11,1:12:5.10:0,5,45	0/0:23,0:23:13.51:0,14,250	0/0:19,0:19:2.55:0,3,127	0/1:17,1:18:12.46:12,0,164	1/1:11,5:18:15.71:94,16,0	1/1:7,4:12:7:45,7,0	1/1:8,2:8:5.79:68,6,0
chr10	76949750	.	GT	G	1231.38	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.807;DP=657;FS=10.205;HRun=5;HaplotypeScore=63.2786;InbreedingCoeff=0.9998;MQ=79.07;MQ0=0;MQRankSum=-3.235;QD=25.65;ReadPosRankSum=3.963;VQSLOD=2.8182;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,47:48:99:1326,117,0	0/0:15,0:15:42.14:0,42,574	0/0:33,0:29:78.04:0,78,972	0/0:27,0:25:62.75:0,63,731	0/0:19,0:19:57.19:0,57,778	0/0:24,0:24:69.23:0,69,941	0/0:21,0:21:63.20:0,63,846	0/0:21,0:21:51.16:0,51,683	0/0:22,0:22:66.19:0,66,863	0/0:25,0:25:72.21:0,72,941	0/0:21,0:21:63.15:0,63,828	0/0:24,0:24:72.24:0,72,983	0/0:22,0:22:66.21:0,66,882	0/0:26,0:26:78.14:0,78,1005	0/0:28,0:28:84.21:0,84,1110	0/0:24,0:24:69.21:0,69,912	0/0:24,0:24:66.22:0,66,902	0/0:21,0:21:60.17:0,60,799	0/0:21,0:21:60.18:0,60,781	0/0:13,0:13:36.12:0,36,487	0/0:26,0:26:78.20:0,78,1027	0/0:15,0:15:45.15:0,45,612	0/0:15,0:15:45.14:0,45,592	0/0:25,0:25:72.22:0,72,967	0/0:22,0:22:66.22:0,66,898	0/0:26,0:26:75.23:0,75,993	0/0:27,0:27:69.22:0,69,926	0/0:22,0:22:60.20:0,60,820
chr10	76949947	.	G	GAA	9232.57	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-6.673;DP=553;FS=0.000;HRun=10;HaplotypeScore=71.8361;InbreedingCoeff=0.9792;MQ=71.42;MQ0=2;MQRankSum=-1.984;QD=23.55;ReadPosRankSum=-4.109;VQSLOD=3.4941;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:54.13:0,54,507	1/1:1,5:7:15.05:223,15,0	0/0:8,0:9:20.62:0,21,179	0/0:7,0:7:11.51:0,12,109	1/1:9,1:27:42.66:228,43,0	1/1:3,13:18:33.06:468,33,0	1/1:6,23:31:53.66:754,54,0	1/1:10,14:27:62.45:800,62,0	0/0:23,0:23:63.10:0,63,632	1/1:4,16:20:48.13:650,48,0	1/1:3,6:11:20.98:262,21,0	0/0:27,0:28:65.78:0,66,646	0/0:16,0:16:45.03:0,45,440	1/1:2,14:17:27.05:378,27,0	1/1:7,13:21:29.06:357,29,0	1/1:4,13:17:24.07:341,24,0	1/1:0,23:29:73.18:942,73,0	1/1:1,12:17:41.61:541,42,0	1/1:4,11:18:39.05:479,39,0	1/1:5,12:19:39.01:495,39,0	1/1:0,30:33:53.11:708,53,0	0/0:10,0:11:9.74:0,10,101	0/0:12,0:12:19.20:0,19,186	0/0:29,0:31:71.83:0,72,713	1/1:0,0:15:18.39:90,18,0	1/1:7,18:30:64.90:814,65,0	1/1:5,14:21:27.08:388,27,0	1/1:2,10:12:21.07:314,21,0
chr10	76950131	.	GCCTGGCTCGAGAAAA	G	2046.25	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.942;DP=632;FS=0.000;HRun=0;HaplotypeScore=249.3496;InbreedingCoeff=0.9908;MQ=86.91;MQ0=0;MQRankSum=-6.179;QD=75.79;ReadPosRankSum=0.760;VQSLOD=3.0954;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,21:27:48.16:2141,48,0	0/0:9,0:9:27.08:0,27,1825	0/0:28,0:28:63.28:0,63,4202	0/0:17,0:17:51.17:0,51,2422	0/0:27,0:27:78.25:0,78,4887	0/0:13,0:13:36.12:0,36,2572	0/0:23,0:23:66.23:0,66,4591	0/0:29,0:29:84.29:0,84,5231	0/0:22,0:22:63.22:0,63,4406	0/0:30,0:30:90.31:0,90,5609	0/0:14,0:14:42.14:0,42,2849	0/0:27,0:27:75.26:0,75,5498	0/0:23,0:23:66.23:0,66,4359	0/0:18,0:18:51.18:0,51,3278	0/0:18,0:18:54.19:0,54,4025	0/0:24,0:24:69.24:0,69,4918	0/0:36,0:36:99:0,102,7121	0/0:26,0:26:78.27:0,78,5235	0/0:24,0:24:72.25:0,72,4712	0/0:13,0:13:36.12:0,36,2282	0/0:31,0:31:87.30:0,87,6093	0/0:31,0:31:84.29:0,84,5923	0/0:18,0:18:51.16:0,51,3303	0/0:27,0:27:81.28:0,81,5441	0/0:24,0:24:72.25:0,72,4684	0/0:28,0:28:78.27:0,78,4911	0/0:19,0:19:54.19:0,54,3743	0/0:6,0:6:18.06:0,18,1285
chr10	76951268	.	C	CAAAAAA	9641.47	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=0.615;DP=519;FS=25.035;HRun=13;HaplotypeScore=130.4585;InbreedingCoeff=0.5768;MQ=61.69;MQ0=7;MQRankSum=-3.240;QD=22.85;ReadPosRankSum=-4.364;VQSLOD=-0.3011;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:27,1:26:63.21:1090,63,0	1/1:1,1:9:18.52:318,19,0	0/0:39,0:20:1.87:0,2,84	0/1:28,0:14:9.20:33,0,9	1/1:6,0:31:69.06:903,69,0	1/1:5,0:21:9.03:167,9,0	1/1:5,0:19:16.40:227,16,0	1/1:19,0:17:11.98:141,12,0	0/0:9,0:10:20.32:0,20,249	1/1:7,11:19:40.80:807,41,0	1/1:3,17:26:51.06:929,51,0	0/0:19,0:19:18.74:0,19,469	0/1:7,0:9:22.23:22,0,238	1/1:5,7:12:6.02:129,6,0	1/1:3,14:18:3.48:93,3,0	1/1:15,0:16:30:359,30,0	1/1:15,0:18:39:640,39,0	1/1:12,0:13:21.07:446,21,0	1/1:7,0:18:42.06:703,42,0	1/1:16,0:17:39.01:655,39,0	1/1:3,0:3:5.97:62,6,0	0/0:12,0:13:26.65:0,27,397	0/0:14,0:14:13.58:0,14,288	0/1:16,0:17:12.87:13,0,388	1/1:18,0:27:64.53:887,65,0	1/1:14,0:13:27.09:448,27,0	1/1:3,0:20:12.19:289,12,0	1/1:4,5:10:12.04:281,12,0
chr10	76951318	.	AT	A	920.15	PASS	AB=0.883;AC=7;AF=0.130;AN=54;BaseQRankSum=5.202;DP=398;FS=1.280;HRun=10;HaplotypeScore=72.7439;InbreedingCoeff=0.5042;MQ=63.68;MQ0=2;MQRankSum=0.133;QD=9.29;ReadPosRankSum=0.918;VQSLOD=2.5507;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,17:23:35.85:301,36,0	0/0:7,0:7:17.87:0,18,167	0/1:14,0:7:4.27:4,0,22	0/0:14,0:8:12.06:0,12,82	0/1:12,14:26:12.39:354,0,12	0/0:18,0:19:29.56:0,30,298	0/0:9,0:9:12.03:0,12,133	0/0:33,0:31:78.20:0,78,848	0/0:5,0:5:15.04:0,15,166	0/0:9,0:9:21.04:0,21,222	0/0:20,0:19:33.09:0,33,363	0/0:14,0:14:12.03:0,12,332	0/0:6,0:6:18.05:0,18,199	0/0:6,0:6:5.98:0,6,52	0/0:8,0:8:1.55:0,2,4	0/0:12,0:12:20.84:0,21,226	0/0:32,0:32:66.14:0,66,712	0/0:19,0:19:45.37:0,45,451	0/0:16,1:17:13.03:0,13,363	0/0:12,0:12:29.96:0,30,302	./.	0/1:11,0:11:2.96:3,0,178	0/0:12,0:12:27:0,27,267	0/0:9,0:9:20.76:0,21,195	1/1:7,17:24:44.98:389,45,0	0/0:12,0:11:21.05:0,21,226	0/0:8,0:8:8.83:0,9,99	0/0:14,0:14:36.07:0,36,386
chr10	76952070	.	ACAGGTTTG	A	23047.30	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=18.608;DP=679;FS=0.296;HRun=0;HaplotypeScore=184.2722;InbreedingCoeff=0.9941;MQ=75.62;MQ0=1;MQRankSum=-18.900;QD=63.14;ReadPosRankSum=0.686;VQSLOD=4.6914;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,5169	1/1:1,10:11:27.09:789,27,0	0/0:26,0:26:69.24:0,69,2468	0/0:21,0:22:66.12:0,66,2442	0/0:29,0:29:87.30:0,87,3648	1/1:2,20:22:36.12:1052,36,0	1/1:3,23:25:54.18:1455,54,0	1/1:6,26:32:78.18:2060,78,0	0/0:30,0:30:90.31:0,90,3984	1/1:3,24:27:75.10:1896,75,0	1/1:2,15:17:39.05:1026,39,0	0/0:29,0:29:87.27:0,87,3690	0/0:23,0:23:69.24:0,69,2998	1/1:1,17:18:51.18:1490,51,0	1/1:2,30:32:78.27:2279,78,0	1/1:1,22:23:60.21:1752,60,0	1/1:4,9:13:18.06:520,18,0	1/1:1,14:15:30.10:877,30,0	1/1:3,20:23:57.31:1245,57,0	1/1:2,26:28:78.27:2258,78,0	1/1:1,12:13:29.86:682,30,0	0/0:27,0:27:78.24:0,78,3059	0/0:39,0:39:99:0,114,4817	0/0:25,0:25:75.26:0,75,3190	0/0:21,0:21:63.22:0,63,2819	1/1:2,22:24:60.19:1563,60,0	1/1:4,30:34:60.02:1752,60,0	1/1:0,7:7:12.04:351,12,0
chr10	76958604	.	CAGAG	C	427.16	PASS	AB=0.971;AC=32;AF=0.667;AN=48;BaseQRankSum=0.892;DP=427;FS=0.000;HRun=0;HaplotypeScore=91.1551;InbreedingCoeff=0.2846;MQ=29.52;MQ0=122;MQRankSum=-1.691;QD=1.40;ReadPosRankSum=-2.144;VQSLOD=1.3277;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:17:0.18:1,0,0	1/1:4,0:4:2.97:20,3,0	./.	./.	1/1:16,0:13:0.47:1,0,0	1/1:16,0:9:3.95:34,4,0	1/1:19,0:15:4.62:22,5,0	1/1:20,5:21:0.50:111,0,0	0/0:13,0:11:5.50:0,6,40	1/1:20,0:18:24.05:187,24,0	./.	0/0:18,0:16:5.20:0,5,53	0/0:12,0:8:0:0,0,0	1/1:15,0:10:2.68:25,3,0	1/1:15,0:14:1.64:4,2,0	0/0:8,0:6:0.47:0,0,1	1/1:28,0:13:2.60:35,3,0	0/1:18,0:5:5.66:14,0,6	0/1:13,0:11:10.98:17,0,11	0/1:14,0:11:0.03:0,0,0	./.	0/0:17,0:13:2.99:0,3,23	1/1:11,0:7:0.38:1,0,0	1/1:14,0:11:0.47:1,0,0	0/0:16,0:14:0.47:0,0,1	1/1:21,0:16:9.45:59,9,0	1/1:10,0:9:0.89:2,1,0	0/1:19,0:4:0:0,0,0
chr10	76958636	.	GAA	G	291.42	PASS	AB=1.000;AC=16;AF=0.308;AN=52;BaseQRankSum=-1.839;DP=351;FS=6.446;HRun=3;HaplotypeScore=79.4480;InbreedingCoeff=-0.0541;MQ=25.23;MQ0=109;MQRankSum=0.861;QD=1.39;ReadPosRankSum=4.442;VQSLOD=-0.7088;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:14:0.96:20,0,1	0/0:2,0:2:1.55:0,2,4	./.	./.	0/0:13,0:11:0.89:0,1,2	0/1:13,0:8:3.76:4,0,7	0/1:12,0:8:8.54:9,0,12	0/1:20,0:18:65.29:65,0,87	0/0:10,0:9:7.81:0,8,29	0/1:17,0:15:40.54:91,0,41	0/0:13,0:12:1.43:0,1,4	0/1:10,0:9:15.60:16,0,18	0/0:9,0:6:4.19:0,4,14	0/1:16,0:10:5.49:8,0,5	0/0:15,0:13:10.26:0,10,28	0/1:9,0:7:5.24:18,0,5	1/1:19,0:6:10.02:42,10,0	0/0:16,0:3:3.34:0,3,16	0/1:14,0:10:26.23:28,0,26	0/0:12,0:9:4.74:0,5,13	0/0:22,0:9:1.82:0,2,5	0/0:7,5:10:5.67:0,6,17	0/0:5,0:4:4.33:0,4,13	0/0:12,0:8:1.25:0,1,3	1/1:12,0:10:3:25,3,0	0/1:17,0:13:20.83:84,0,21	0/1:6,0:4:3.25:3,0,3	0/1:22,0:3:7.43:9,0,7
chr10	76966613	.	CTATG	C	3154.23	PASS	AC=16;AF=0.308;AN=52;BaseQRankSum=-7.587;DP=826;FS=1.594;HRun=0;HaplotypeScore=199.8886;InbreedingCoeff=0.9405;MQ=66.80;MQ0=4;MQRankSum=3.078;QD=12.32;ReadPosRankSum=-0.014;VQSLOD=2.9819;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:1.77:0,2,64	0/0:15,0:15:23.99:0,24,392	./.	./.	1/1:25,0:24:20.93:166,21,0	0/0:24,0:24:27.08:0,27,475	0/0:20,0:19:12.01:0,12,169	0/0:46,0:46:26.67:0,27,176	1/1:8,16:24:18.06:278,18,0	0/0:48,0:46:69.21:0,69,1401	0/0:18,0:17:21.07:0,21,460	1/1:20,27:47:48.16:741,48,0	1/1:25,30:54:72.24:1111,72,0	0/0:31,0:31:17.95:0,18,662	0/0:42,0:42:63.06:0,63,865	0/0:41,0:41:75.17:0,75,1202	0/0:27,0:27:33.04:0,33,714	0/0:12,0:11:17.97:0,18,232	0/0:19,0:18:15.02:0,15,184	0/0:26,0:26:33.09:0,33,512	0/0:28,0:28:15:0,15,192	1/1:14,14:29:21.06:302,21,0	1/1:17,11:28:24.08:370,24,0	1/1:12,8:20:12.04:185,12,0	1/1:28,0:28:21.02:199,21,0	0/0:31,0:31:45.13:0,45,749	0/0:28,0:28:45.15:0,45,805	0/0:22,0:22:39.12:0,39,659
chr10	76966655	.	ATGTATGTGTGTG	A	1463.69	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-4.807;DP=797;FS=5.808;HRun=0;HaplotypeScore=342.2704;InbreedingCoeff=0.7915;MQ=55.57;MQ0=11;MQRankSum=-0.057;QD=27.62;ReadPosRankSum=-5.073;VQSLOD=0.9043;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:5.74:0,6,200	0/0:19,0:19:31.41:0,31,1267	0/0:24,0:15:42.14:0,42,843	0/0:18,0:9:21.54:0,22,464	1/1:14,8:21:44.91:865,45,0	0/0:22,0:22:35.95:0,36,1391	0/0:19,0:19:23.70:0,24,541	0/0:53,0:50:57.17:0,57,527	0/0:33,0:32:60.21:0,60,1246	0/0:46,0:44:91.91:0,92,3829	0/0:14,0:13:26.34:0,26,1077	0/0:49,0:49:99:0,102,2253	0/0:47,0:46:99:0,111,2713	0/0:34,0:34:44.53:0,45,1974	0/0:42,0:42:63.61:0,64,1856	0/0:44,0:44:75.08:0,75,2902	0/0:24,0:24:39.65:0,40,1824	0/0:16,0:15:21.41:0,21,640	0/1:12,0:9:1.26:1,0,338	0/0:23,0:23:42.08:0,42,1561	0/0:28,0:28:24.88:0,25,519	0/0:23,0:23:38.98:0,39,921	0/0:20,0:20:48.16:0,48,1277	0/0:20,0:20:36.12:0,36,799	1/1:13,6:19:33.07:719,33,0	0/0:34,0:34:8.24:0,8,2095	0/0:28,0:28:49.81:0,50,2078	0/0:22,0:22:43.09:0,43,1772
chr10	76966659	.	ATGTGTGTG	A	1037.49	PASS	AB=0.867;AC=7;AF=0.125;AN=56;BaseQRankSum=-2.558;DP=792;FS=0.000;HRun=0;HaplotypeScore=290.1896;InbreedingCoeff=0.3989;MQ=57.32;MQ0=10;MQRankSum=-1.631;QD=9.35;ReadPosRankSum=-3.812;VQSLOD=0.8801;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,26:39:24.46:129,0,24	0/0:19,0:19:3.46:0,3,754	0/0:26,0:17:48.16:0,48,965	0/0:21,0:12:30.51:0,31,588	1/1:20,0:19:37.15:549,37,0	0/0:24,0:24:29.53:0,30,863	0/1:21,0:21:12.83:13,0,200	0/0:55,0:53:14.76:0,15,148	0/0:33,0:32:63.22:0,63,1051	0/0:43,0:41:85.84:0,86,2297	0/0:14,0:13:23.82:0,24,755	0/0:48,0:48:99:0,108,1829	0/0:48,0:48:99:0,117,2043	0/0:32,0:32:17.12:0,17,1134	0/0:40,0:40:36.65:0,37,909	0/0:45,0:45:56.47:0,56,1711	0/0:22,0:22:39.65:0,40,1206	0/0:14,0:13:15.41:0,15,350	0/1:14,0:12:28.78:29,0,167	0/0:23,0:23:39.06:0,39,912	0/0:29,0:29:12.56:0,13,222	0/0:21,0:21:1.83:0,2,634	0/0:20,0:20:48.16:0,48,869	0/0:18,0:19:36.12:0,36,631	1/1:17,0:17:24.08:458,24,0	0/0:35,0:35:1.64:0,2,1232	0/0:25,0:25:49.81:0,50,1305	0/0:22,0:22:20.09:0,20,1114
chr10	76966661	.	G	GTA	3044.83	PASS	AB=0.837;AC=13;AF=0.232;AN=56;BaseQRankSum=-0.129;DP=794;FS=9.998;HRun=0;HaplotypeScore=205.1665;InbreedingCoeff=-0.3118;MQ=57.62;MQ0=8;MQRankSum=-5.781;QD=8.88;ReadPosRankSum=-3.504;VQSLOD=1.8594;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:11.10:0,11,79	0/1:16,3:19:91.34:149,0,91	0/0:29,0:19:13.68:0,14,639	0/0:21,0:13:29.04:0,29,423	0/0:19,0:18:16.83:0,17,185	0/1:19,6:25:99:140,0,154	0/1:21,0:21:36.45:36,0,144	0/0:58,0:55:29.48:0,29,318	0/0:34,0:33:63.17:0,63,823	0/0:42,0:40:27.46:0,27,342	0/0:15,0:15:6.93:0,7,159	0/0:48,0:48:99:0,108,1300	0/0:50,0:49:99:0,117,1325	0/1:23,9:32:99:325,0,159	0/1:34,5:40:99:409,0,153	0/1:31,13:44:99:492,0,143	0/0:22,0:22:53.52:0,54,320	0/1:13,2:14:50.07:50,0,102	0/1:11,1:11:47.51:101,0,48	0/1:16,6:22:52.23:270,0,52	0/1:28,1:29:49.22:49,0,165	0/0:21,0:21:38.67:0,39,462	0/0:20,0:20:48.10:0,48,561	0/0:19,0:19:36.09:0,36,466	0/0:15,0:15:22.30:0,22,102	0/1:27,8:35:99:312,0,189	0/1:16,10:26:65.37:476,0,65	0/1:13,10:23:67.59:389,0,68
chr10	76966663	.	G	GTA	2061.91	PASS	AB=0.837;AC=12;AF=0.214;AN=56;BaseQRankSum=6.243;DP=792;FS=7.661;HRun=0;HaplotypeScore=209.5377;InbreedingCoeff=-0.2863;MQ=58.17;MQ0=8;MQRankSum=-4.436;QD=6.46;ReadPosRankSum=-2.778;VQSLOD=1.9874;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:11.72:0,12,81	0/1:16,3:19:65.36:65,0,163	0/0:30,0:20:57.10:0,57,794	0/0:22,0:13:33.33:0,33,468	0/0:18,0:18:34.03:0,34,254	0/1:20,6:26:99:251,0,167	0/1:22,0:22:29.85:30,0,197	0/0:52,0:49:3.33:0,3,491	0/0:33,0:32:66.21:0,66,965	0/0:41,0:39:99:0,113,628	0/0:16,0:16:10.73:0,11,223	0/0:49,0:49:99:0,108,1571	0/0:50,0:49:99:0,120,1710	0/1:23,9:32:99:212,0,231	0/1:35,5:40:99:120,0,354	0/1:32,12:44:99:309,0,271	0/0:22,0:22:49.28:0,49,416	0/1:13,2:14:60.70:61,0,150	0/1:10,1:10:72.74:78,0,73	0/1:17,5:22:99:183,0,110	0/0:29,1:30:28.43:0,28,284	0/0:21,0:21:38.72:0,39,568	0/0:20,0:20:48.16:0,48,700	0/0:21,0:21:39.09:0,39,556	0/0:12,0:12:23.13:0,23,128	0/1:29,8:37:99:233,0,289	0/1:18,9:27:92.20:379,0,92	0/1:15,9:24:99:292,0,107
chr10	76966753	.	T	TATCC	1749.07	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-1.194;DP=735;FS=1.322;HRun=0;HaplotypeScore=139.3606;InbreedingCoeff=0.9896;MQ=59.03;MQ0=4;MQRankSum=-1.298;QD=23.96;ReadPosRankSum=-2.518;VQSLOD=3.0264;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:14.03:311,14,0	0/0:11,0:11:33.11:0,33,557	0/0:25,0:19:22.20:0,22,407	0/0:27,0:22:30.38:0,30,631	1/1:1,18:19:30.05:605,30,0	0/0:24,0:24:45.10:0,45,666	0/0:23,0:23:57.18:0,57,913	0/0:34,0:34:81.22:0,81,1187	0/0:31,0:31:78.22:0,78,1242	0/0:30,0:29:78.23:0,78,1270	0/0:9,0:9:21.06:0,21,312	0/0:32,0:32:78.24:0,78,1262	0/0:43,0:43:93.55:0,94,1538	0/0:29,0:29:84.29:0,84,1405	0/0:45,0:45:99:0,111,1822	0/0:38,0:38:99:0,102,1651	0/0:31,0:31:53.08:0,53,1110	0/0:23,0:23:49.68:0,50,806	0/0:18,0:16:35.49:0,35,450	0/0:15,0:15:33.11:0,33,552	0/0:41,0:41:93.21:0,93,1554	0/0:22,0:22:60.20:0,60,992	0/0:16,0:16:39.13:0,39,641	0/0:22,0:22:51.17:0,51,862	1/1:4,17:22:39.13:973,39,0	0/0:28,0:28:60.14:0,60,907	0/0:23,0:23:57.17:0,57,900	0/0:22,0:22:60.12:0,60,944
chr10	76966985	.	C	CCCCTCCCCCTT	15981.02	PASS	AB=0.790;AC=40;AF=0.714;AN=56;BaseQRankSum=-8.080;DP=552;FS=6.896;HRun=0;HaplotypeScore=140.9156;InbreedingCoeff=0.8032;MQ=74.02;MQ0=1;MQRankSum=-8.968;QD=42.17;ReadPosRankSum=-1.691;VQSLOD=3.6754;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,11:26:9.03:413,9,0	1/1:9,0:9:18.06:419,18,0	0/1:26,0:25:15.64:16,0,816	0/0:35,0:32:40.62:0,41,1067	1/1:2,8:13:21.07:517,21,0	1/1:3,5:9:9.03:427,9,0	1/1:3,8:17:18.06:980,18,0	1/1:35,0:35:55.37:910,55,0	0/0:26,0:26:72.25:0,72,2309	1/1:8,13:27:45.07:1616,45,0	1/1:1,9:16:21.03:964,21,0	0/0:25,0:25:69.14:0,69,2004	0/0:23,0:23:60.20:0,60,1920	1/1:2,11:18:17.88:923,18,0	1/1:5,19:28:18.06:998,18,0	1/1:5,11:22:24.08:1332,24,0	0/1:5,7:17:4.17:161,0,4	1/1:3,7:12:9.03:500,9,0	1/1:8,0:7:15.04:388,15,0	1/1:1,10:12:27.09:1257,27,0	1/1:7,11:20:18.02:538,18,0	0/0:20,0:20:48.16:0,48,1270	0/0:23,0:23:66.21:0,66,1878	0/0:21,0:20:60.19:0,60,1788	1/1:4,11:18:12.04:571,12,0	1/1:4,13:22:45.15:1848,45,0	1/1:13,0:13:15.49:370,15,0	1/1:1,7:9:15.05:831,15,0
chr10	76967542	.	C	CA	627.02	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.740;DP=592;FS=10.620;HRun=8;HaplotypeScore=56.1920;InbreedingCoeff=0.9670;MQ=74.99;MQ0=0;MQRankSum=-1.069;QD=23.22;ReadPosRankSum=-1.233;VQSLOD=3.1313;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.02:0,81,736	0/0:10,0:10:29.99:0,30,266	0/0:12,0:12:20.98:0,21,184	0/0:12,0:11:23.98:0,24,213	1/1:2,10:13:32.89:346,33,0	0/0:32,0:32:89.97:0,90,805	0/0:15,0:17:46.01:0,46,378	0/0:30,0:30:87.01:0,87,782	0/0:26,0:27:65.06:0,65,582	0/0:21,0:21:60.03:0,60,548	0/0:13,0:13:36.02:0,36,329	0/0:31,0:31:90.05:0,90,823	0/0:23,0:23:57.01:0,57,517	0/0:26,0:26:75.01:0,75,676	0/0:21,0:21:51.01:0,51,462	0/0:31,0:31:84.04:0,84,769	0/0:26,0:26:65.98:0,66,596	0/0:12,0:12:36.02:0,36,329	0/0:30,0:30:81.02:0,81,736	0/0:15,0:15:36.02:0,36,329	0/0:20,0:20:57.01:0,57,515	0/0:20,0:20:57.02:0,57,518	0/0:16,0:16:42:0,42,375	0/0:32,0:32:81.02:0,81,736	1/1:3,11:14:36.08:403,36,0	0/0:33,0:33:87.03:0,87,789	0/0:24,0:24:63.03:0,63,576	0/0:3,0:3:9:0,9,82
chr10	76968807	.	TACCTGGGGCA	T	4532.89	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=11.140;DP=741;FS=4.306;HRun=0;HaplotypeScore=220.4427;InbreedingCoeff=0.9992;MQ=83.18;MQ0=0;MQRankSum=-10.500;QD=76.83;ReadPosRankSum=-0.209;VQSLOD=4.3920;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,7425	0/0:9,0:9:27.09:0,27,1342	0/0:29,0:29:63.59:0,64,3143	0/0:19,0:19:42.66:0,43,1884	1/1:2,34:37:72.25:2358,72,0	0/0:28,0:28:78.27:0,78,3807	0/0:45,0:45:99:0,132,6612	0/0:33,0:33:93.32:0,93,4504	0/0:23,0:23:66.23:0,66,3497	0/0:35,0:35:99:0,102,5099	0/0:12,0:12:33.11:0,33,1709	0/0:28,0:28:84.29:0,84,4080	0/0:28,0:28:78.27:0,78,3966	0/0:29,0:29:87.30:0,87,4551	0/0:25,0:25:75.26:0,75,3888	0/0:20,0:20:60.21:0,60,3061	0/0:18,0:18:54.19:0,54,2862	0/0:23,0:23:66.23:0,66,3459	0/0:26,0:26:78.27:0,78,3565	0/0:21,0:21:57.18:0,57,2823	0/0:28,0:28:84.27:0,84,4058	0/0:25,0:25:72.25:0,72,3470	0/0:27,0:27:81.28:0,81,4065	0/0:35,0:35:99:0,102,5197	1/1:0,22:22:66.23:2174,66,0	0/0:33,0:33:96.33:0,96,4984	0/0:22,0:22:66.23:0,66,3380	0/0:12,0:12:33.11:0,33,1746
chr10	76969708	.	C	CTTCCTCGTATCA	9691.88	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-5.047;DP=625;FS=6.068;HRun=0;HaplotypeScore=220.6822;InbreedingCoeff=0.9969;MQ=81.13;MQ0=0;MQRankSum=-12.595;QD=108.90;ReadPosRankSum=-2.516;VQSLOD=3.6765;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,10:25:48.16:2801,48,0	0/0:12,0:12:33.10:0,33,1124	0/0:18,0:18:42.14:0,42,1236	0/0:19,0:19:40.95:0,41,1213	1/1:22,14:37:69.24:3358,69,0	0/0:25,0:24:72.25:0,72,2475	0/0:17,0:17:39.12:0,39,1242	0/0:41,0:41:99:0,102,2988	0/0:22,0:22:57.18:0,57,1923	0/0:24,0:24:60.20:0,60,2073	0/0:25,0:25:66.23:0,66,2295	0/0:17,0:17:51.18:0,51,1867	0/0:26,0:26:72.25:0,72,2473	0/0:24,0:24:66.23:0,66,2345	0/0:20,0:20:57.18:0,57,1988	0/0:24,0:24:63.19:0,63,2118	0/0:38,0:38:99:0,99,3531	0/0:14,0:14:42.14:0,42,1534	0/0:21,0:21:48.16:0,48,1724	0/0:17,0:17:51.18:0,51,1827	0/0:30,0:30:87.27:0,87,3028	0/0:7,0:7:18.06:0,18,627	0/0:14,0:14:36.12:0,36,1217	0/0:17,0:16:39.13:0,39,1381	1/1:8,14:27:63.22:3533,63,0	0/0:26,0:26:66.23:0,66,2383	0/0:19,0:19:51.17:0,51,1798	0/0:19,0:19:57.20:0,57,2068
chr10	76970235	.	CTCTAGACTAAGAAACCAGAAAATGACAAAGAAA	C	2697.75	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.152;DP=770;FS=5.783;HRun=0;HaplotypeScore=601.4993;InbreedingCoeff=0.9817;MQ=79.79;MQ0=0;MQRankSum=-5.278;QD=89.92;ReadPosRankSum=0.746;VQSLOD=0.2410;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,14697	0/0:9,0:9:27.09:0,27,3245	0/0:24,0:24:72.24:0,72,3937	0/0:29,0:29:87.24:0,87,5788	1/1:6,11:17:27.09:1764,27,0	0/0:26,0:26:75.26:0,75,9535	0/0:27,0:27:78.27:0,78,8790	0/0:36,0:36:99:0,102,8592	0/0:32,0:32:96.33:0,96,12752	0/0:36,0:36:99:0,108,14084	0/0:22,0:22:63.22:0,63,8481	0/0:37,0:37:99:0,111,13377	0/0:30,0:30:90.29:0,90,10782	0/0:28,0:28:84.29:0,84,10929	0/0:42,0:42:99:0,126,17084	0/0:26,0:26:78.27:0,78,10290	0/0:31,0:31:93.30:0,93,11280	0/0:12,0:12:33.11:0,33,4846	0/0:22,0:22:66.23:0,66,6336	0/0:33,0:33:93.31:0,93,10998	0/0:36,0:36:99:0,108,12455	0/0:26,0:26:78.25:0,78,8207	0/0:21,0:21:63.22:0,63,6599	0/0:24,0:24:72.25:0,72,9728	1/1:5,8:13:12.04:1050,12,0	0/0:33,0:33:99:0,99,12697	0/0:51,0:51:99:0,154,20200	0/0:8,0:8:24.06:0,24,3242
chr10	76972120	.	C	CT	2294.11	PASS	AB=0.836;AC=31;AF=0.554;AN=56;BaseQRankSum=-4.138;DP=529;FS=1.681;HRun=15;HaplotypeScore=96.5221;InbreedingCoeff=0.4327;MQ=70.97;MQ0=10;MQRankSum=0.297;QD=6.83;ReadPosRankSum=-2.198;VQSLOD=2.4236;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:31:29.27:0,29,84	1/1:5,1:6:3.47:26,3,0	0/0:33,0:16:8.07:0,8,43	0/0:21,0:14:7.01:0,7,56	0/0:15,0:20:11.44:0,11,100	0/1:5,6:14:7.80:93,0,8	1/1:8,6:14:17.71:134,18,0	1/1:18,10:28:18.61:234,19,0	0/0:11,0:11:17.09:0,17,99	1/1:21,6:27:12.36:199,12,0	0/1:9,6:15:12.04:121,0,12	0/1:8,0:10:6.53:7,0,47	0/0:14,0:14:17.34:0,17,106	1/1:5,10:15:11.99:101,12,0	0/1:12,3:15:30.27:84,0,30	1/1:5,9:14:3.99:105,4,0	1/1:11,18:35:40.22:301,40,0	1/1:10,9:20:9.27:173,9,0	0/1:12,1:14:0.30:84,0,0	1/1:14,7:22:11.76:191,12,0	1/1:6,6:13:16.07:118,16,0	0/0:19,0:19:26.20:0,26,160	0/0:15,0:16:19.44:0,19,112	0/0:15,0:18:10.09:0,10,118	0/1:9,1:11:13.85:14,0,31	1/1:17,9:27:32.68:247,33,0	0/1:18,2:22:24.83:124,0,25	1/1:4,8:12:2.96:132,3,0
chr10	76972146	.	CTT	C	421.72	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.827;DP=514;FS=1.865;HRun=12;HaplotypeScore=83.5855;InbreedingCoeff=0.8036;MQ=70.08;MQ0=14;MQRankSum=-5.013;QD=12.40;ReadPosRankSum=2.075;VQSLOD=2.5076;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,23:31:47.55:516,48,0	0/0:3,0:4:11.53:0,12,143	0/0:37,0:15:7.02:0,7,159	0/0:26,0:10:16.86:0,17,172	0/0:10,1:21:27.23:0,27,120	0/0:13,0:13:24.07:0,24,323	0/0:14,0:15:36.55:0,37,489	0/0:28,0:29:60.15:0,60,853	0/0:13,0:13:36.11:0,36,508	0/0:17,0:18:39.11:0,39,531	0/0:10,0:11:21.06:0,21,278	0/0:14,0:14:30.06:0,30,378	0/0:15,0:15:30.04:0,30,396	0/0:14,0:14:21.02:0,21,269	0/0:20,0:19:48.07:0,48,644	0/0:13,0:13:24.07:0,24,321	0/0:32,0:33:54.04:0,54,663	0/0:17,0:18:21.04:0,21,259	0/0:15,0:13:30.06:0,30,417	0/0:14,0:15:39.09:0,39,500	0/0:9,0:9:24.05:0,24,318	0/0:19,1:21:8.05:0,8,393	0/0:16,0:15:27.06:0,27,372	0/0:23,0:23:50.65:0,51,672	0/0:5,0:14:17.94:0,18,72	0/0:18,0:18:30.92:0,31,396	0/0:21,0:21:39.11:0,39,545	0/0:11,0:9:17.95:0,18,195
chr10	76975844	.	C	CA	2161.55	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.470;DP=710;FS=4.106;HRun=9;HaplotypeScore=71.5395;InbreedingCoeff=0.9904;MQ=84.20;MQ0=0;MQRankSum=-4.644;QD=22.06;ReadPosRankSum=-1.782;VQSLOD=3.8711;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:7,45:52:77.20:1295,77,0	0/0:9,0:9:23.99:0,24,208	0/0:22,0:22:36.83:0,37,305	0/0:21,0:21:27.76:0,28,277	1/1:3,16:19:39.02:405,39,0	0/0:14,0:14:38.99:0,39,339	0/0:30,0:30:68.91:0,69,588	0/0:29,0:29:59.96:0,60,521	0/0:27,1:28:29.80:0,30,488	0/0:24,0:24:59.96:0,60,521	0/0:17,0:18:13.61:0,14,268	0/0:25,0:25:59.93:0,60,516	0/0:27,0:28:71.02:0,71,605	0/0:23,0:23:59.97:0,60,517	0/0:26,0:27:62:0,62,527	0/0:33,0:33:92.97:0,93,807	0/0:30,0:30:83.93:0,84,717	0/0:18,0:19:56.03:0,56,475	0/0:24,0:24:62.52:0,63,546	0/0:22,2:24:26.79:0,27,462	0/0:25,0:25:71.97:0,72,621	0/0:25,0:25:53.95:0,54,468	0/0:21,0:21:35.96:0,36,312	0/0:35,0:35:89.90:0,90,769	1/1:4,23:26:34.15:605,34,0	0/0:28,0:28:68.95:0,69,597	0/0:30,0:30:68.93:0,69,594	0/0:20,0:20:56.99:0,57,495
chr10	76985136	.	GT	G	9919.15	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=12.752;DP=636;FS=1.437;HRun=8;HaplotypeScore=64.0127;InbreedingCoeff=0.9980;MQ=80.29;MQ0=0;MQRankSum=-3.282;QD=23.67;ReadPosRankSum=-0.973;VQSLOD=5.1687;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,165,1957	1/1:0,10:10:30.05:290,30,0	0/0:26,0:25:43.85:0,44,454	0/0:11,0:10:23.70:0,24,248	1/1:0,22:22:60.05:571,60,0	1/1:4,18:22:51.07:493,51,0	1/1:3,24:27:60.09:579,60,0	1/1:4,29:33:87.08:822,87,0	0/0:11,0:11:33.10:0,33,399	1/1:1,17:18:51.08:493,51,0	1/1:1,14:15:39.06:377,39,0	0/0:21,0:21:54.17:0,54,652	0/0:19,0:19:48.12:0,48,557	1/1:2,19:21:51.08:493,51,0	1/1:5,27:32:69.11:666,69,0	1/1:4,20:24:26.86:543,27,0	1/1:3,27:30:69.11:666,69,0	1/1:1,19:20:57.09:550,57,0	1/1:3,24:27:72.11:695,72,0	1/1:2,14:16:39.06:377,39,0	1/1:4,23:27:48.07:464,48,0	0/0:26,0:26:72.21:0,72,852	0/0:17,0:17:45.14:0,45,541	0/0:28,0:28:78.23:0,78,932	1/1:5,13:18:36.05:347,36,0	1/1:3,24:27:72.08:684,72,0	1/1:0,24:24:65.95:637,66,0	1/1:0,6:6:18.03:174,18,0
chr10	76986892	.	A	AG	21813.32	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-16.755;DP=691;FS=18.215;HRun=0;HaplotypeScore=60.2423;InbreedingCoeff=0.9995;MQ=89.11;MQ0=0;MQRankSum=-6.846;QD=44.07;ReadPosRankSum=2.401;VQSLOD=3.0891;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,53:53:99:2350,148,0	1/1:0,10:10:30.10:477,30,0	0/0:27,0:27:75.21:0,75,1002	0/0:33,0:33:84.10:0,84,1093	1/1:1,22:23:66.23:1055,66,0	1/1:0,18:18:54.18:863,54,0	1/1:1,25:26:66.23:1055,66,0	1/1:0,24:24:72.19:1079,72,0	0/0:22,0:22:66.21:0,66,904	1/1:1,22:24:69.22:1068,69,0	1/1:0,10:10:30.10:480,30,0	0/0:32,0:32:93.31:0,93,1295	0/0:22,0:22:66.22:0,66,922	1/1:0,33:33:87.30:1390,87,0	1/1:1,23:23:63.21:1007,63,0	1/1:0,31:31:90.31:1439,90,0	1/1:0,29:29:81.28:1295,81,0	1/1:1,34:35:96.33:1535,96,0	1/1:3,17:20:54.18:848,54,0	1/1:1,17:18:48.16:767,48,0	1/1:0,34:34:99:1583,99,0	0/0:23,0:23:69.23:0,69,964	0/0:15,0:15:45.15:0,45,626	0/0:22,0:22:66.19:0,66,900	1/1:0,24:24:57.19:911,57,0	1/1:1,28:29:84.28:1318,84,0	1/1:0,20:20:57.19:911,57,0	1/1:0,10:10:24.08:384,24,0
chr10	76988182	.	A	AAG	671.40	PASS	AB=0.871;AC=36;AF=0.750;AN=48;BaseQRankSum=-1.742;DP=504;FS=32.508;HRun=0;HaplotypeScore=87.0853;InbreedingCoeff=0.1737;MQ=69.83;MQ0=10;MQRankSum=-0.051;QD=1.86;ReadPosRankSum=0.328;VQSLOD=0.1813;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:3.01:41,3,0	0/1:11,0:11:0:0,0,0	./.	./.	1/1:11,0:10:2.99:23,3,0	1/1:17,0:15:2.99:24,3,0	1/1:25,0:25:2.68:11,3,0	1/1:31,0:31:15.62:79,16,0	0/1:12,5:18:3.01:39,0,3	1/1:15,0:15:4.68:23,5,0	./.	1/1:20,0:20:2.94:18,3,0	0/1:17,6:23:8.31:71,0,8	1/1:13,0:13:3:28,3,0	0/0:9,0:9:2.63:0,3,14	0/0:17,0:18:2.84:0,3,14	1/1:16,0:16:4.24:27,4,0	1/1:10,0:9:0.01:1,0,0	1/1:10,0:10:8.46:67,8,0	1/1:16,0:16:3.01:42,3,0	1/1:15,0:15:2.74:12,3,0	0/0:16,0:17:2.84:0,3,14	0/0:13,0:13:2.92:0,3,17	0/1:43,3:46:37.17:189,0,37	./.	1/1:19,0:19:10.69:64,11,0	1/1:19,0:18:3.62:13,4,0	1/1:4,0:3:2.97:20,3,0
chr10	76988299	.	AAC	A	12268.63	PASS	AB=0.914;AC=39;AF=0.696;AN=56;BaseQRankSum=8.947;DP=624;FS=8.668;HRun=0;HaplotypeScore=85.8794;InbreedingCoeff=0.9151;MQ=70.97;MQ0=4;MQRankSum=-1.315;QD=28.73;ReadPosRankSum=3.182;VQSLOD=6.1593;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.25:0,72,1190	1/1:0,9:9:27.09:341,27,0	0/0:39,0:32:77.49:0,77,1106	0/0:32,0:29:48.37:0,48,925	1/1:2,12:13:30.10:379,30,0	1/1:2,23:25:57.18:719,57,0	1/1:1,23:24:60.16:740,60,0	1/1:3,16:19:48.15:605,48,0	0/0:19,0:19:54.18:0,54,878	1/1:5,24:29:72.22:896,72,0	1/1:1,13:14:36.11:454,36,0	0/0:30,0:30:81.26:0,81,1314	0/0:20,0:20:51.17:0,51,827	1/1:1,11:12:27.09:341,27,0	1/1:3,21:24:57.18:719,57,0	1/1:1,20:21:54.17:682,54,0	1/1:2,27:29:68.73:870,69,0	1/1:0,22:22:57.18:717,57,0	1/1:3,15:18:48.11:573,48,0	1/1:0,18:18:51.12:626,51,0	1/1:9,32:42:92.72:1149,93,0	0/0:15,0:15:42.14:0,42,691	0/0:15,0:15:42.14:0,42,696	0/1:29,3:32:32.35:32,0,1085	1/1:0,24:23:63.20:795,63,0	1/1:3,17:20:48.09:572,48,0	1/1:2,17:19:51.16:643,51,0	1/1:1,11:12:33.11:416,33,0
chr10	76989616	.	AAAAC	A	19689.77	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=15.627;DP=715;FS=0.000;HRun=0;HaplotypeScore=124.7673;InbreedingCoeff=0.9950;MQ=87.03;MQ0=5;MQRankSum=-7.515;QD=42.53;ReadPosRankSum=0.955;VQSLOD=5.0764;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,3636	1/1:1,18:19:42.10:716,42,0	0/0:30,0:30:75.26:0,75,1762	0/0:26,0:26:69.24:0,69,1688	1/1:4,18:20:39.13:697,39,0	1/1:1,19:20:45.15:803,45,0	1/1:1,25:26:63.22:1125,63,0	1/1:4,22:26:63.18:1058,63,0	0/0:25,0:25:72.25:0,72,1858	1/1:1,29:30:87.28:1522,87,0	1/1:1,18:17:42.10:700,42,0	0/0:31,0:31:84.29:0,84,2165	0/0:30,0:30:87.30:0,87,2164	1/1:3,10:13:27.09:480,27,0	1/1:3,25:28:60.16:1038,60,0	1/1:2,24:26:69.24:1232,69,0	1/1:3,33:36:78.27:1391,78,0	1/1:2,27:28:69.24:1232,69,0	1/1:1,22:23:66.20:1121,66,0	1/1:3,16:19:45.12:771,45,0	1/1:2,35:37:99:1735,99,0	0/0:25,0:25:75.26:0,75,1897	0/0:16,0:16:36.12:0,36,928	0/0:19,0:19:57.20:0,57,1433	1/1:2,17:19:45.15:804,45,0	1/1:4,32:36:96.33:1712,96,0	1/1:2,27:28:75.26:1339,75,0	1/1:2,4:6:12.04:214,12,0
chr10	76989790	.	GAAGAA	G	19395.28	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=14.963;DP=615;FS=5.421;HRun=0;HaplotypeScore=131.4179;InbreedingCoeff=0.9979;MQ=62.98;MQ0=1;MQRankSum=-9.361;QD=49.86;ReadPosRankSum=1.240;VQSLOD=4.7315;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,175,5287	1/1:0,12:12:23.99:511,24,0	0/0:17,0:17:42.13:0,42,1203	0/0:9,0:9:24.08:0,24,654	1/1:2,24:26:51.17:1086,51,0	1/1:1,18:19:45.15:959,45,0	1/1:0,21:21:57.15:1170,57,0	1/1:3,24:27:69.20:1313,69,0	0/0:18,0:18:48.16:0,48,1450	1/1:1,20:21:60.19:1239,60,0	1/1:0,16:16:39.13:830,39,0	0/0:29,1:30:20.33:0,20,2471	0/0:23,0:23:66.23:0,66,2037	1/1:0,15:15:42.14:895,42,0	1/1:1,15:16:36.12:767,36,0	1/1:1,21:22:54.19:1151,54,0	1/1:0,35:35:81.23:1682,81,0	1/1:1,31:32:78.27:1663,78,0	1/1:0,13:13:39.04:602,39,0	1/1:2,22:24:51.09:946,51,0	1/1:0,17:17:33.11:703,33,0	0/0:21,0:21:63.19:0,63,1833	0/0:22,0:22:60.19:0,60,1807	0/0:28,0:27:78.04:0,78,2112	1/1:0,18:18:51.18:1086,51,0	1/1:2,23:25:69.22:1387,69,0	1/1:0,22:21:45.15:957,45,0	1/1:0,8:8:21.07:448,21,0
chr10	76990155	.	AC	A	11297.04	PASS	AB=0.560;AC=37;AF=0.661;AN=56;BaseQRankSum=10.461;DP=647;FS=6.351;HRun=4;HaplotypeScore=141.1103;InbreedingCoeff=0.9223;MQ=49.98;MQ0=32;MQRankSum=-9.566;QD=28.10;ReadPosRankSum=-0.419;VQSLOD=3.0167;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:69.11:0,69,842	1/1:3,5:8:17.08:184,17,0	0/0:48,0:19:25.12:0,25,301	0/0:63,0:12:14.95:0,15,159	1/1:3,17:20:59.78:627,60,0	1/1:10,21:27:72.03:791,72,0	1/1:4,12:16:48.05:537,48,0	1/1:8,18:20:48.09:547,48,0	0/0:15,0:15:42.13:0,42,552	1/1:8,32:38:99:1125,103,0	1/1:3,18:21:63.01:685,63,0	0/0:21,0:22:66.18:0,66,839	0/0:18,0:18:54.15:0,54,697	1/1:6,12:18:48.05:520,48,0	1/1:4,21:25:72.07:808,72,0	0/1:3,11:14:1.52:371,0,2	1/1:9,13:21:50.94:542,51,0	1/1:9,22:31:84.04:907,84,0	1/1:6,16:20:54.14:622,54,0	1/1:7,12:19:53.87:570,54,0	1/1:0,15:15:35.92:374,36,0	0/0:17,0:17:51.17:0,51,690	0/0:16,0:16:48.11:0,48,611	0/0:17,0:17:45.10:0,45,572	1/1:8,18:22:60.10:684,60,0	1/1:12,18:29:55.27:831,55,0	1/1:4,13:17:50.99:537,51,0	1/1:0,1:1:3.01:36,3,0
chr10	76990172	.	CAAAAACAAA	C	17296.93	PASS	AB=0.696;AC=36;AF=0.643;AN=56;BaseQRankSum=13.116;DP=616;FS=2.228;HRun=0;HaplotypeScore=196.9903;InbreedingCoeff=0.6614;MQ=43.99;MQ0=22;MQRankSum=-12.051;QD=40.41;ReadPosRankSum=1.127;VQSLOD=4.7862;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:28:24.07:24,0,1412	1/1:2,5:7:15.04:314,15,0	0/0:25,0:9:21.07:0,21,529	0/0:50,0:12:29.13:0,29,847	1/1:6,18:24:57.12:1192,57,0	1/1:6,21:25:60.18:1520,60,0	1/1:6,11:17:30.09:744,30,0	1/1:20,10:23:29.24:570,29,0	0/0:18,0:18:45.15:0,45,1746	1/1:16,23:37:81.27:2082,81,0	1/1:12,8:20:45.14:949,45,0	0/0:26,0:26:69.24:0,69,2795	0/0:18,0:18:42.14:0,42,1770	1/1:4,11:15:33.09:824,33,0	1/1:7,21:28:57.19:1416,57,0	0/1:3,15:18:99:842,0,104	1/1:11,11:22:21:477,21,0	0/1:13,13:26:24.98:877,0,25	1/1:13,17:27:57.06:990,57,0	1/1:5,13:18:30.03:769,30,0	1/1:10,2:12:15.04:282,15,0	0/0:14,0:14:33.11:0,33,1133	0/0:19,0:19:57.20:0,57,2087	0/0:15,0:15:39.12:0,39,1531	1/1:10,9:18:48.03:972,48,0	0/1:7,21:27:17.28:1482,0,17	1/1:5,13:18:35.78:951,36,0	1/1:1,0:1:2.97:20,3,0
chr10	76990178	.	CAAA	C	8011.03	PASS	AB=0.941;AC=36;AF=0.643;AN=56;BaseQRankSum=14.226;DP=579;FS=2.157;HRun=8;HaplotypeScore=163.2835;InbreedingCoeff=0.6886;MQ=46.37;MQ0=13;MQRankSum=-11.596;QD=20.08;ReadPosRankSum=0.329;VQSLOD=1.4130;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:55.81:56,0,177	1/1:7,0:7:15:142,15,0	0/0:21,0:11:29.75:0,30,428	0/0:46,0:12:32.12:0,32,544	1/1:21,1:22:57.06:628,57,0	1/1:23,2:24:60.05:574,60,0	1/1:14,2:16:30.04:303,30,0	0/1:22,3:18:2.24:480,0,2	0/0:19,0:19:51.17:0,51,1015	1/1:31,3:34:80.95:817,81,0	1/1:11,8:19:48.01:518,48,0	0/0:25,0:25:72.20:0,72,1451	0/0:18,0:18:45.15:0,45,909	1/1:15,0:15:33.04:332,33,0	1/1:25,3:28:57.08:578,57,0	0/1:16,1:17:29.42:285,0,29	1/1:18,3:21:20.97:216,21,0	0/1:23,2:25:37.28:389,0,37	1/1:22,2:21:57.01:627,57,0	1/1:14,0:14:29.99:283,30,0	1/1:10,2:12:24.04:286,24,0	0/0:15,0:15:36.12:0,36,681	0/0:20,0:20:60.21:0,60,1187	0/0:15,0:15:45.13:0,45,847	1/1:13,4:17:47.97:491,48,0	1/1:26,1:26:57.24:644,57,0	1/1:18,0:18:35.55:342,36,0	1/1:1,0:1:2.97:20,3,0
chr10	76992781	.	AACACACAC	A	1600.52	PASS	AB=0.851;AC=28;AF=0.560;AN=50;BaseQRankSum=5.428;DP=536;FS=29.535;HRun=0;HaplotypeScore=149.3696;InbreedingCoeff=0.6502;MQ=54.09;MQ0=23;MQRankSum=-5.552;QD=5.68;ReadPosRankSum=-2.130;VQSLOD=0.9300;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:30:30.08:0,30,568	1/1:6,4:9:5.97:149,6,0	./.	./.	0/0:15,0:19:8.68:0,9,254	1/1:19,0:18:5.60:51,6,0	1/1:22,10:32:5.81:34,6,0	0/0:25,0:24:4.81:0,5,29	0/0:15,0:15:15.02:0,15,376	1/1:12,4:15:11.53:183,12,0	1/1:12,1:15:6.02:85,6,0	0/0:18,0:20:33.11:0,33,996	0/0:18,0:19:21.07:0,21,637	0/1:16,0:24:7.51:8,0,31	1/1:9,8:18:11.87:241,12,0	1/1:10,3:14:11.84:110,12,0	1/1:14,4:18:8.98:148,9,0	1/1:12,8:18:2.38:74,2,0	1/1:16,5:21:13.54:298,14,0	1/1:16,7:23:14.81:149,15,0	1/1:20,0:19:5.20:73,5,0	0/0:26,0:27:36.12:0,36,1122	0/0:21,0:20:33.11:0,33,1069	0/0:21,0:21:36.11:0,36,1176	0/0:10,0:19:9.50:0,10,327	0/1:19,1:20:35.59:105,0,36	1/1:11,0:12:5.95:79,6,0	./.
chr10	76997050	.	CA	C	2907.80	PASS	AB=0.757;AC=35;AF=0.625;AN=56;BaseQRankSum=-0.303;DP=519;FS=21.317;HRun=14;HaplotypeScore=68.3239;InbreedingCoeff=0.2511;MQ=56.18;MQ0=11;MQRankSum=2.801;QD=7.09;ReadPosRankSum=3.360;VQSLOD=0.8330;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,10:27:34.89:230,35,0	1/1:2,5:8:10.82:67,11,0	0/1:10,1:4:9.15:9,0,48	0/0:9,0:6:2.03:0,2,23	0/1:24,0:25:7.23:7,0,225	1/1:5,16:20:32.65:226,33,0	0/1:8,12:22:45.83:90,0,46	1/1:5,10:14:4.88:178,5,0	0/0:18,0:18:40.78:0,41,354	1/1:4,8:12:4:145,4,0	1/1:9,11:21:37.40:241,37,0	0/0:21,0:21:52.91:0,53,448	0/0:11,0:11:23.73:0,24,196	0/1:14,9:20:3.38:152,0,3	0/1:11,2:12:5.80:84,0,6	1/1:6,11:17:16.83:108,17,0	1/1:6,12:17:0.19:174,0,0	1/1:5,12:17:4.34:106,4,0	0/1:5,12:22:41.64:181,0,42	1/1:8,14:21:37.66:251,38,0	1/1:3,7:10:11.49:82,11,0	0/1:8,10:21:13.84:181,0,14	0/0:21,0:21:35.83:0,36,412	0/0:25,1:28:37.98:0,38,495	0/1:15,2:17:14.39:14,0,150	0/1:12,12:24:15.30:191,0,15	1/1:11,16:28:23.15:250,23,0	1/1:2,8:10:17.80:123,18,0
chr10	76997430	.	CAT	C	1733.83	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.892;DP=774;FS=0.000;HRun=0;HaplotypeScore=86.5297;InbreedingCoeff=0.9998;MQ=89.87;MQ0=0;MQRankSum=-4.183;QD=36.12;ReadPosRankSum=1.734;VQSLOD=5.9510;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,2123	0/0:11,0:11:33.11:0,33,609	0/0:31,0:31:78.27:0,78,1421	0/0:29,0:29:78.27:0,78,1425	1/1:0,21:21:60.20:884,60,0	0/0:27,0:27:81.28:0,81,1510	0/0:20,0:20:57.20:0,57,1068	0/0:34,0:34:96.33:0,96,1791	0/0:34,0:34:99:0,102,1879	0/0:25,0:24:69.24:0,69,1278	0/0:29,0:29:81.28:0,81,1510	0/0:34,0:34:99:0,102,1867	0/0:29,0:29:87.30:0,87,1630	0/0:18,0:18:45.15:0,45,836	0/0:36,0:36:99:0,108,1986	0/0:28,0:28:81.26:0,81,1471	0/0:31,0:31:87.30:0,87,1609	0/0:18,0:18:45.15:0,45,833	0/0:29,0:29:78.27:0,78,1440	0/0:23,0:23:69.24:0,69,1259	0/0:36,0:36:99:0,102,1891	0/0:29,0:29:84.29:0,84,1550	0/0:29,0:29:81.28:0,81,1514	0/0:27,0:27:78.27:0,78,1446	1/1:0,27:27:66.22:972,66,0	0/0:24,0:24:72.25:0,72,1343	0/0:39,0:39:99:0,111,2037	0/0:17,0:17:48.16:0,48,898
chr10	77000458	.	TA	T	5927.29	PASS	AB=0.721;AC=39;AF=0.696;AN=56;BaseQRankSum=4.901;DP=540;FS=1.381;HRun=13;HaplotypeScore=62.6614;InbreedingCoeff=0.6397;MQ=72.62;MQ0=0;MQRankSum=-1.023;QD=14.32;ReadPosRankSum=3.049;VQSLOD=5.6570;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:24:36.85:107,37,0	0/1:3,8:11:30.74:126,0,31	0/0:17,1:15:9.40:0,9,116	0/1:12,1:13:18.58:19,0,83	1/1:6,13:20:8.79:228,9,0	1/1:2,24:27:70.63:509,71,0	1/1:4,13:19:39.78:274,40,0	1/1:10,16:27:57.69:404,58,0	0/0:18,0:18:39.05:0,39,375	0/1:10,10:21:20.56:185,0,21	1/1:4,12:16:14.63:261,15,0	0/0:24,0:24:36.92:0,37,492	0/0:15,3:18:1.24:0,1,320	1/1:6,19:26:34.60:372,35,0	1/1:3,27:30:74.53:547,75,0	1/1:1,24:25:65.16:481,65,0	1/1:6,18:25:0.35:320,0,0	1/1:3,13:16:29.76:215,30,0	1/1:5,14:19:49.73:352,50,0	1/1:7,15:23:48.77:340,49,0	1/1:3,10:16:11.79:213,12,0	0/0:14,0:15:14.02:0,14,280	0/0:17,0:17:33.02:0,33,310	0/0:12,0:16:32.89:0,33,306	1/1:0,5:5:14.91:109,15,0	1/1:6,20:26:33.43:406,33,0	1/1:4,15:19:44.71:328,45,0	1/1:0,6:6:17.90:131,18,0
chr10	77002505	.	G	GCT	11275.14	PASS	AB=0.592;AC=29;AF=0.518;AN=56;BaseQRankSum=17.542;DP=622;FS=18.206;HRun=0;HaplotypeScore=142.4169;InbreedingCoeff=0.5778;MQ=82.11;MQ0=0;MQRankSum=-5.454;QD=30.72;ReadPosRankSum=6.076;VQSLOD=4.9569;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,1838	1/1:0,6:6:18.06:238,18,0	0/0:18,0:18:51.15:0,51,778	0/0:23,0:23:63.20:0,63,955	0/0:22,0:22:66.22:0,66,999	0/1:3,17:20:20.04:729,0,20	0/1:7,17:24:46.10:604,0,46	0/1:16,11:27:99:405,0,357	0/0:15,0:15:45.14:0,45,710	1/1:1,16:17:51.17:708,51,0	0/1:6,18:24:22.83:539,0,23	0/0:23,0:23:69.24:0,69,1125	0/0:27,0:27:81.28:0,81,1320	1/1:4,16:20:23.70:723,24,0	1/1:5,18:23:23.39:720,23,0	1/1:5,17:22:3.40:704,3,0	1/1:10,27:37:51.16:1244,51,0	1/1:1,23:24:47.30:973,47,0	1/1:4,16:20:17.21:658,17,0	1/1:3,14:17:0.55:400,1,0	1/1:9,17:26:15.63:760,16,0	0/0:16,0:16:45.15:0,45,731	0/0:25,0:25:63.66:0,64,992	0/0:24,0:24:72.23:0,72,1144	0/0:19,0:19:57.19:0,57,860	0/1:6,25:31:58.03:905,0,58	1/1:7,18:25:18.31:797,18,0	1/1:0,4:4:12.04:169,12,0
chr10	77002506	.	A	AGG	11666.07	PASS	AB=0.718;AC=33;AF=0.589;AN=56;BaseQRankSum=16.252;DP=620;FS=21.800;HRun=1;HaplotypeScore=142.2615;InbreedingCoeff=0.9205;MQ=81.57;MQ0=0;MQRankSum=-4.893;QD=31.79;ReadPosRankSum=3.554;VQSLOD=3.6644;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:92:0,92,717	1/1:0,6:6:18.06:238,18,0	0/0:18,0:18:51.13:0,51,750	0/0:22,0:22:63.18:0,63,948	0/0:22,0:22:60.95:0,61,407	1/1:3,17:20:41.64:744,42,0	1/1:7,17:24:53.01:673,53,0	0/1:17,11:28:59.47:492,0,59	0/0:14,0:14:42.14:0,42,685	1/1:1,16:17:51.17:709,51,0	1/1:6,18:24:26.31:569,26,0	0/0:24,0:24:69.24:0,69,1123	0/0:27,0:27:81.28:0,81,1312	1/1:4,15:20:42.67:662,43,0	1/1:4,18:22:63.97:816,64,0	1/1:5,17:22:31.28:757,31,0	1/1:9,27:36:44.63:1118,45,0	1/1:1,23:24:72.22:1021,72,0	1/1:4,15:20:39.57:699,40,0	1/1:3,14:17:33.11:436,33,0	1/1:10,17:27:47.32:758,47,0	0/0:16,0:16:45.15:0,45,728	0/0:25,0:25:63.63:0,64,965	0/0:24,0:24:72.21:0,72,1113	0/0:19,0:19:55.98:0,56,356	1/1:6,24:31:49.94:1019,50,0	1/1:7,18:25:55.22:788,55,0	1/1:0,4:4:12.04:169,12,0
chr10	77003389	.	C	CAAT	2300.05	PASS	AB=1.000;AC=41;AF=0.788;AN=52;BaseQRankSum=1.712;DP=228;FS=5.014;HRun=0;HaplotypeScore=55.2386;InbreedingCoeff=0.5828;MQ=82.92;MQ0=2;MQRankSum=-0.967;QD=12.37;ReadPosRankSum=-0.456;VQSLOD=2.5026;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,8:14:15.05:296,15,0	1/1:1,0:1:2.68:11,3,0	./.	0/1:13,0:8:0:0,0,0	1/1:7,0:7:17.84:132,18,0	1/1:11,0:11:23.88:186,24,0	./.	1/1:25,0:25:44.56:328,45,0	0/0:8,0:8:9.01:0,9,89	1/1:7,0:6:9.02:106,9,0	1/1:7,0:7:8.75:49,9,0	1/1:6,0:6:8.99:74,9,0	0/0:9,0:9:6.01:0,6,66	1/1:6,0:6:11.81:78,12,0	1/1:4,0:4:8.94:68,9,0	1/1:1,0:1:2.98:21,3,0	1/1:11,0:11:16.96:158,17,0	1/1:14,0:14:27.67:199,28,0	1/1:11,0:11:14.98:130,15,0	1/1:7,0:7:2.96:19,3,0	1/1:2,0:2:3:25,3,0	0/0:5,0:5:3:0,3,25	0/0:7,0:7:3.01:0,3,42	0/0:2,0:2:2.99:0,3,24	1/1:9,0:9:17.94:160,18,0	1/1:9,0:9:5.98:62,6,0	1/1:9,0:9:17.87:132,18,0	1/1:12,0:12:26.88:208,27,0
chr10	77003413	.	TAAG	T	97.21	PASS	AB=1.000;AC=7;AF=0.146;AN=48;BaseQRankSum=-3.807;DP=242;FS=15.780;HRun=0;HaplotypeScore=71.7691;InbreedingCoeff=0.4600;MQ=48.75;MQ0=2;MQRankSum=3.955;QD=3.60;ReadPosRankSum=0.392;VQSLOD=0.5416;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:65.49:65,0,72	0/0:4,0:4:11.89:0,12,98	./.	./.	0/0:15,0:15:26.79:0,27,231	0/0:12,0:12:14.93:0,15,128	0/0:2,0:1:2.94:0,3,18	0/0:41,0:40:32.64:0,33,219	1/1:1,3:4:6.02:78,6,0	0/0:7,0:6:11.99:0,12,123	0/0:5,0:5:5.93:0,6,55	0/0:4,0:4:3:0,3,25	0/0:4,0:4:6.01:0,6,82	./.	0/0:4,0:4:2.94:0,3,18	0/0:2,0:2:5.95:0,6,57	0/0:12,0:12:11.73:0,12,70	0/0:18,0:18:17.83:0,18,140	0/0:16,0:15:5.96:0,6,43	0/0:6,0:6:14.87:0,15,118	./.	1/1:1,5:6:8.64:49,9,0	0/0:6,0:6:14.92:0,15,149	1/1:2,0:2:2.99:24,3,0	0/0:14,0:14:36.02:0,36,393	0/0:6,0:6:17.96:0,18,181	0/0:10,0:10:20.83:0,21,189	0/0:15,0:15:29.86:0,30,276
chr10	77004223	.	A	ACTGC	41477.82	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-14.100;DP=850;FS=3.957;HRun=0;HaplotypeScore=127.6618;InbreedingCoeff=0.9992;MQ=77.86;MQ0=0;MQRankSum=-8.698;QD=65.22;ReadPosRankSum=1.537;VQSLOD=6.9168;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,54:64:99:4238,160,0	1/1:1,14:15:36.12:966,36,0	0/0:27,0:27:66.18:0,66,1121	0/0:18,0:18:51.15:0,51,898	1/1:3,22:25:53.97:1411,54,0	1/1:1,19:23:60.21:1583,60,0	1/1:8,32:41:99:2822,108,0	1/1:9,23:32:90.29:2262,90,0	0/0:34,0:34:96.28:0,96,1693	1/1:5,26:31:87.15:2188,87,0	1/1:4,17:22:44.89:1125,45,0	0/0:24,0:24:72.25:0,72,1357	0/0:29,0:29:84.26:0,84,1524	1/1:7,35:42:99:2575,99,0	1/1:2,29:33:81.28:2187,81,0	1/1:3,28:32:21.29:1920,21,0	1/1:3,33:38:78.27:2106,78,0	1/1:3,25:28:75.21:1948,75,0	1/1:6,20:26:66.23:1681,66,0	1/1:1,17:18:48.16:1261,48,0	1/1:6,50:56:99:3165,120,0	0/0:32,0:32:93.32:0,93,1746	0/0:22,0:22:60.18:0,60,1069	0/0:28,0:28:81.28:0,81,1531	1/1:7,33:40:99:2808,111,0	1/1:1,33:34:99:2666,99,0	1/1:5,20:25:66.23:1756,66,0	1/1:2,9:11:30.10:809,30,0
chr10	77004271	.	G	GA	1609.82	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.285;DP=769;FS=4.463;HRun=2;HaplotypeScore=141.8590;InbreedingCoeff=0.9999;MQ=84.97;MQ0=0;MQRankSum=-4.656;QD=36.59;ReadPosRankSum=-1.658;VQSLOD=2.6744;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,162,2180	0/0:15,0:15:42.11:0,42,565	0/0:27,0:27:57.22:0,57,936	0/0:28,0:28:48.42:0,48,975	1/1:1,16:17:42.07:568,42,0	0/0:19,0:19:48.16:0,48,671	0/0:31,0:31:78.22:0,78,1068	0/0:29,0:29:84.28:0,84,1173	0/0:32,0:32:96.31:0,96,1327	0/0:28,0:28:84.23:0,84,1145	0/0:22,0:22:57.19:0,57,786	0/0:24,0:24:69.22:0,69,948	0/0:27,0:27:78.25:0,78,1073	0/0:27,0:27:78.26:0,78,1090	0/0:38,0:38:99:0,105,1453	0/0:27,0:27:69.22:0,69,950	0/0:33,0:33:87.22:0,87,1137	0/0:21,0:21:63.19:0,63,859	0/0:20,0:20:54.18:0,54,752	0/0:26,0:26:78.25:0,78,1066	0/0:39,0:39:99:0,108,1456	0/0:36,0:36:99:0,105,1464	0/0:24,0:24:69.23:0,69,950	0/0:25,0:25:72.24:0,72,1007	1/1:0,27:27:81.27:1163,81,0	0/0:26,0:26:69.23:0,69,964	0/0:29,0:29:84.28:0,84,1174	0/0:15,0:15:45.13:0,45,610
chr10	77006129	.	A	AC	17367.46	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-17.128;DP=705;FS=0.000;HRun=3;HaplotypeScore=63.9192;InbreedingCoeff=0.9961;MQ=83.73;MQ0=0;MQRankSum=-3.884;QD=36.72;ReadPosRankSum=0.324;VQSLOD=5.1513;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,57:60:99:2268,163,0	1/1:1,9:10:27.09:378,27,0	0/0:21,0:21:48.14:0,48,570	0/0:20,0:20:14.99:0,15,371	0/0:21,0:21:60.13:0,60,691	1/1:1,23:24:66.22:924,66,0	1/1:2,30:32:87.29:1216,87,0	1/1:2,26:28:75.20:996,75,0	0/0:23,0:23:69.21:0,69,826	1/1:2,16:18:48.16:665,48,0	1/1:1,17:18:48.16:672,48,0	0/0:29,0:29:78.24:0,78,936	0/0:25,0:25:72.20:0,72,851	1/1:0,27:27:63.21:882,63,0	1/1:0,31:31:75.25:1050,75,0	1/1:2,27:29:72.24:1008,72,0	1/1:3,19:22:54.18:755,54,0	1/1:0,24:24:69.23:966,69,0	1/1:1,21:22:63.18:856,63,0	1/1:1,21:22:60.20:840,60,0	1/1:0,31:31:84.28:1176,84,0	0/0:22,0:22:66.19:0,66,782	0/0:12,0:12:27.08:0,27,323	0/0:31,0:31:87.24:0,87,1029	0/0:28,0:28:69.20:0,69,815	1/1:2,32:34:96.28:1305,96,0	1/1:3,31:34:84.28:1176,84,0	1/1:2,5:7:18.04:234,18,0
chr10	77008056	.	CTTGTTGTTG	C	3900.79	PASS	AC=32;AF=0.593;AN=54;BaseQRankSum=6.101;DP=509;FS=3.136;HRun=0;HaplotypeScore=120.7283;InbreedingCoeff=0.8345;MQ=74.99;MQ0=4;MQRankSum=-4.450;QD=14.78;ReadPosRankSum=-4.109;VQSLOD=1.4429;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:29.79:0,30,286	1/1:6,0:6:6.02:136,6,0	0/0:24,0:15:21.07:0,21,626	0/0:26,0:25:63.15:0,63,1553	0/0:20,0:20:38.96:0,39,404	1/1:12,0:12:12.01:157,12,0	1/1:19,0:19:23.92:530,24,0	1/1:4,12:16:36.12:718,36,0	0/0:19,0:18:54.18:0,54,1306	1/1:6,12:18:24:404,24,0	1/1:4,0:4:3:25,3,0	0/0:29,0:29:75.24:0,75,1925	0/0:29,0:28:69.24:0,69,1874	1/1:20,0:20:3.01:75,3,0	1/1:28,0:28:6.02:151,6,0	1/1:22,0:22:9.03:226,9,0	1/1:24,0:24:9.03:226,9,0	1/1:25,0:25:6.02:133,6,0	1/1:3,8:11:23.99:329,24,0	./.	1/1:16,0:16:17.98:241,18,0	0/0:5,0:5:12.04:0,12,285	0/0:9,0:8:17.91:0,18,328	0/0:46,0:45:99:0,128,4107	0/0:14,0:13:10.14:0,10,268	1/1:6,11:17:24.35:251,24,0	1/1:20,0:20:8.69:226,9,0	1/1:1,0:6:3.01:72,3,0
chr10	77008063	.	TTGTTGTTGTTGCTGC	T	4697.01	PASS	AC=32;AF=0.593;AN=54;BaseQRankSum=5.786;DP=470;FS=0.495;HRun=0;HaplotypeScore=144.7064;InbreedingCoeff=0.8417;MQ=68.33;MQ0=6;MQRankSum=-3.852;QD=19.57;ReadPosRankSum=-1.644;VQSLOD=3.0764;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:35.55:0,36,318	1/1:5,0:5:8.96:153,9,0	0/0:19,0:10:21.07:0,21,626	0/0:23,0:22:63.15:0,63,1553	0/0:14,0:13:38.96:0,39,404	1/1:10,0:10:12.01:157,12,0	1/1:21,0:19:29.80:566,30,0	1/1:12,0:12:36.12:718,36,0	0/0:23,0:22:64.77:0,65,1838	1/1:13,0:13:24:404,24,0	1/1:2,0:2:3:25,3,0	0/0:30,0:30:78.25:0,78,2274	0/0:28,0:26:75.26:0,75,2627	1/1:1,16:17:3.01:134,3,0	1/1:0,26:26:6.49:269,6,0	1/1:0,21:22:9.03:386,9,0	1/1:0,25:25:8.82:402,9,0	1/1:1,21:22:6.02:192,6,0	1/1:10,0:10:23.99:329,24,0	./.	1/1:16,0:16:13.66:235,14,0	0/0:6,0:6:13.60:0,14,289	0/0:8,0:7:17.91:0,18,328	0/0:46,0:45:99:0,134,5699	0/0:13,0:12:10.14:0,10,268	1/1:15,0:14:24.35:251,24,0	1/1:1,18:19:8.79:402,9,0	1/1:5,0:5:3.01:72,3,0
chr10	77008577	.	GGGGGA	G	4060.91	PASS	AB=0.978;AC=37;AF=0.661;AN=56;BaseQRankSum=8.728;DP=466;FS=9.829;HRun=0;HaplotypeScore=90.9787;InbreedingCoeff=0.6886;MQ=66.96;MQ0=1;MQRankSum=-4.453;QD=11.19;ReadPosRankSum=8.644;VQSLOD=0.4055;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:36,1:37:20.32:190,20,0	1/1:6,0:6:2.96:19,3,0	0/0:12,0:7:18.03:0,18,319	0/0:12,0:11:13.49:0,13,454	0/1:9,0:9:4.88:103,0,5	0/1:13,1:14:12.37:84,0,12	1/1:27,0:27:18.88:224,19,0	1/1:17,2:19:49.14:453,49,0	0/0:14,0:14:26.09:0,26,491	1/1:18,0:18:39.23:278,39,0	1/1:7,1:8:5.98:60,6,0	0/0:15,0:15:38.94:0,39,803	0/0:14,0:14:36.07:0,36,754	1/1:21,0:21:12.51:125,13,0	1/1:22,3:25:3.90:375,4,0	1/1:14,0:14:19.83:140,20,0	1/1:22,0:22:17.92:221,18,0	1/1:30,1:31:61.72:553,62,0	1/1:14,0:14:13.44:196,13,0	1/1:10,1:11:10.60:159,11,0	1/1:37,1:38:31.30:246,31,0	0/0:11,0:11:24.03:0,24,357	0/0:9,0:9:18.93:0,19,361	0/0:16,0:16:39.83:0,40,822	1/1:14,0:14:29.79:246,30,0	0/1:13,0:13:6.73:160,0,7	1/1:15,2:17:23.42:209,23,0	1/1:5,0:5:2.98:21,3,0
chr10	77008578	.	GGGGA	G	8425.29	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=6.042;DP=451;FS=10.559;HRun=0;HaplotypeScore=67.0798;InbreedingCoeff=0.9049;MQ=67.77;MQ0=1;MQRankSum=-4.400;QD=24.28;ReadPosRankSum=8.129;VQSLOD=2.5251;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:33:22.50:360,22,0	1/1:0,6:6:2.96:19,3,0	0/0:12,0:7:17.69:0,18,225	0/0:12,0:11:13.39:0,13,353	1/1:2,7:9:14.04:291,14,0	1/1:3,11:14:8.90:103,9,0	1/1:1,25:26:36.12:628,36,0	1/1:14,4:18:49.28:524,49,0	0/0:13,0:13:26.54:0,27,404	1/1:9,9:18:49.37:601,49,0	1/1:1,7:8:5.99:73,6,0	0/0:15,0:15:39.09:0,39,657	0/0:15,0:15:39.07:0,39,636	1/1:1,17:18:20.76:360,21,0	1/1:6,19:25:45.08:717,45,0	1/1:0,14:14:24.01:384,24,0	1/1:1,21:22:36.09:625,36,0	1/1:10,20:30:84.74:1304,85,0	1/1:1,11:12:35.83:496,36,0	1/1:4,7:11:22.79:238,23,0	1/1:1,35:36:30.10:492,30,0	0/0:12,0:12:27.02:0,27,322	0/0:9,0:9:18.98:0,19,305	0/0:16,0:16:39.73:0,40,691	1/1:5,8:14:33.03:422,33,0	1/1:0,11:11:29.89:308,30,0	1/1:3,14:17:28.38:428,28,0	1/1:0,5:5:3.01:53,3,0
chr10	77008579	.	GGGAA	G	4740.17	PASS	AB=0.958;AC=38;AF=0.679;AN=56;BaseQRankSum=9.104;DP=445;FS=30.018;HRun=0;HaplotypeScore=79.4707;InbreedingCoeff=0.7743;MQ=67.96;MQ0=1;MQRankSum=-5.269;QD=13.74;ReadPosRankSum=10.750;VQSLOD=2.0706;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:21.89:241,22,0	1/1:6,0:6:1.55:4,2,0	0/0:11,0:7:17.86:0,18,222	0/0:11,0:10:11.97:0,12,336	0/1:9,0:9:0.16:173,0,0	1/1:13,0:13:6.42:52,6,0	1/1:25,1:26:36.09:387,36,0	1/1:19,0:19:11.51:108,12,0	0/0:12,0:12:27.09:0,27,488	1/1:18,0:18:21.78:259,22,0	1/1:8,0:8:5.88:50,6,0	0/0:14,0:14:36.59:0,37,725	0/0:15,0:15:39.11:0,39,724	1/1:17,1:18:21.01:250,21,0	1/1:22,1:23:44.33:447,44,0	1/1:14,0:14:20.97:235,21,0	1/1:21,1:22:36.06:416,36,0	1/1:29,2:31:70.06:745,70,0	1/1:11,1:12:16.71:258,17,0	0/1:10,1:11:12.73:120,0,13	1/1:36,0:36:29.99:327,30,0	0/0:11,0:11:24.08:0,24,428	0/0:11,0:11:25.44:0,25,445	0/0:15,0:15:38.87:0,39,797	1/1:13,0:13:20.82:231,21,0	1/1:11,0:11:9.26:100,9,0	1/1:16,1:17:24.48:304,24,0	1/1:5,0:5:3.01:32,3,0
chr10	77009996	.	C	CA	704.85	PASS	AB=0.933;AC=3;AF=0.054;AN=56;BaseQRankSum=-5.431;DP=645;FS=3.153;HRun=11;HaplotypeScore=70.0221;InbreedingCoeff=0.5130;MQ=73.88;MQ0=0;MQRankSum=0.205;QD=11.37;ReadPosRankSum=-0.929;VQSLOD=3.1670;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,36:48:41.17:777,41,0	0/0:11,0:11:29.88:0,30,232	0/1:10,1:13:33.72:34,0,84	0/0:14,0:14:3.77:0,4,120	0/0:19,0:19:50.80:0,51,395	0/0:17,0:18:46.84:0,47,354	0/0:29,0:29:68.61:0,69,526	0/0:37,0:37:71.65:0,72,553	0/0:15,0:16:13.87:0,14,237	0/0:21,0:22:52.83:0,53,401	0/0:19,0:19:35.80:0,36,278	0/0:27,0:28:61.73:0,62,468	0/0:24,0:26:32.98:0,33,376	0/0:20,0:21:55.82:0,56,424	0/0:34,2:38:29.79:0,30,575	0/0:19,0:20:55.81:0,56,421	0/0:39,0:40:97.63:0,98,749	0/0:13,0:14:28.90:0,29,215	0/0:17,0:20:44.94:0,45,319	0/0:16,0:16:26.84:0,27,209	0/0:19,0:19:53.79:0,54,418	0/0:22,0:22:53.72:0,54,416	0/0:19,0:19:41.79:0,42,321	0/0:34,0:34:89.59:0,90,689	0/0:26,0:27:67.69:0,68,512	0/0:30,1:31:44.22:0,44,527	0/0:21,0:21:47.78:0,48,371	0/0:2,0:2:2.99:0,3,23
chr10	77010819	.	C	CTT	1603.16	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.120;DP=725;FS=2.249;HRun=0;HaplotypeScore=91.6526;InbreedingCoeff=0.9998;MQ=88.79;MQ0=0;MQRankSum=-2.395;QD=42.19;ReadPosRankSum=0.806;VQSLOD=5.2212;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,147,2340	0/0:15,0:15:42.13:0,42,659	0/0:30,0:30:81.25:0,81,1224	0/0:24,0:24:69.23:0,69,1076	1/1:2,16:18:44.90:669,45,0	0/0:25,0:25:66.23:0,66,1076	0/0:25,0:25:75.24:0,75,1194	0/0:23,0:23:60.15:0,60,916	0/0:18,0:18:51.16:0,51,808	0/0:25,0:25:75.26:0,75,1223	0/0:24,0:24:69.22:0,69,1098	0/0:40,0:40:99:0,120,1900	0/0:29,0:29:87.30:0,87,1413	0/0:19,0:19:57.19:0,57,930	0/0:23,0:23:69.22:0,69,1099	0/0:27,0:27:81.26:0,81,1290	0/0:40,0:40:99:0,120,1953	0/0:25,0:25:66.23:0,66,1067	0/0:28,0:28:78.26:0,78,1236	0/0:17,0:17:51.16:0,51,798	0/0:32,0:32:93.30:0,93,1492	0/0:23,0:23:69.24:0,69,1123	0/0:15,0:15:42.14:0,42,681	0/0:37,0:37:99:0,111,1810	1/1:2,18:20:54.14:1055,54,0	0/0:31,0:31:93.30:0,93,1491	0/0:29,0:29:87.28:0,87,1390	0/0:11,0:11:33.11:0,33,538
chr10	77011123	.	TC	T	16450.40	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=13.668;DP=711;FS=3.360;HRun=2;HaplotypeScore=71.1140;InbreedingCoeff=0.9987;MQ=86.61;MQ0=0;MQRankSum=-5.359;QD=34.85;ReadPosRankSum=0.958;VQSLOD=5.3624;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,147,2156	1/1:0,6:6:18.06:233,18,0	0/0:29,0:29:77.38:0,77,1096	0/0:21,0:21:49.68:0,50,656	1/1:0,27:27:72.17:898,72,0	1/1:2,29:31:69.22:895,69,0	1/1:1,16:17:45.15:584,45,0	1/1:1,32:33:93.27:1166,93,0	0/0:21,0:21:63.20:0,63,917	1/1:0,29:29:87.28:1126,87,0	1/1:0,23:23:62.90:716,63,0	0/0:25,0:25:72.20:0,72,1019	0/0:18,0:18:48.15:0,48,701	1/1:1,30:31:78.25:1012,78,0	1/1:0,30:30:84.27:1090,84,0	1/1:0,22:22:66.21:857,66,0	1/1:1,28:29:72.23:934,72,0	1/1:0,16:16:48.16:621,48,0	1/1:0,20:20:60.17:752,60,0	1/1:0,23:23:66.15:819,66,0	1/1:0,31:31:84.21:1069,84,0	0/0:22,0:22:66.21:0,66,968	0/0:19,0:19:54.18:0,54,809	0/0:33,0:33:99:0,99,1459	1/1:1,21:22:60.15:760,60,0	1/1:0,30:30:87.28:1129,87,0	1/1:1,34:35:93.30:1207,93,0	1/1:0,17:17:45.15:583,45,0
chr10	77011386	.	C	CCAA	4965.91	PASS	AB=0.994;AC=21;AF=0.375;AN=56;BaseQRankSum=12.214;DP=587;FS=97.101;HRun=0;HaplotypeScore=201.4586;InbreedingCoeff=-0.3308;MQ=71.15;MQ0=0;MQRankSum=-8.901;QD=12.02;ReadPosRankSum=-5.753;VQSLOD=0.7858;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:74.96:75,0,264	0/0:9,0:8:2.85:0,3,114	0/0:26,0:22:5.09:0,5,372	0/0:15,0:12:13.42:0,13,142	1/1:0,15:20:59.88:931,60,0	0/1:24,0:24:99:193,0,159	0/1:15,0:13:31.06:136,0,31	0/1:29,0:28:99:256,0,191	0/0:23,0:23:66.02:0,66,937	0/1:23,0:22:93.74:196,0,94	0/1:10,0:10:51.66:84,0,52	0/0:22,0:24:62.93:0,63,956	0/0:17,0:17:44.02:0,44,587	0/1:14,0:14:91.81:136,0,92	0/1:17,0:17:47.50:215,0,48	0/1:27,0:27:99:313,0,113	0/1:22,0:22:99:221,0,101	0/1:21,0:21:99:101,0,126	0/1:27,0:27:99:252,0,171	0/1:23,0:23:99:141,0,187	0/1:7,0:7:45.73:46,0,51	0/0:21,0:22:28.96:0,29,725	0/0:14,0:14:11.79:0,12,497	0/0:21,0:21:57.09:0,57,1001	1/1:1,20:28:57.19:1222,57,0	0/1:27,0:27:99:234,0,194	0/1:32,0:32:99:132,0,325	0/1:15,0:17:82.85:83,0,123
chr10	77012494	.	GGTGTGTGTGT	G	591.49	PASS	AC=10;AF=0.385;AN=26;BaseQRankSum=3.828;DP=251;FS=3.853;HRun=0;HaplotypeScore=73.5094;InbreedingCoeff=0.6684;MQ=48.63;MQ0=18;MQRankSum=-4.180;QD=34.79;ReadPosRankSum=0.977;VQSLOD=2.8142;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:22:9.03:0,9,369	1/1:0,2:2:3.01:88,3,0	./.	./.	./.	./.	./.	./.	0/0:14,0:13:9.03:0,9,362	./.	./.	0/0:12,0:12:12.04:0,12,434	0/0:15,0:15:13.22:0,13,464	1/1:0,2:2:6.02:176,6,0	1/1:4,3:3:6.02:176,6,0	./.	0/0:7,0:5:0:0,0,0	1/1:1,1:2:2.97:88,3,0	./.	./.	./.	0/0:15,0:14:21.05:0,21,561	0/0:9,0:9:9.02:0,9,138	0/0:30,0:29:27.09:0,27,1087	./.	./.	1/1:1,3:3:6.02:176,6,0	./.
chr10	77013958	.	C	CTT	8942.15	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=8.282;DP=384;FS=6.470;HRun=9;HaplotypeScore=83.1168;InbreedingCoeff=0.8410;MQ=73.00;MQ0=0;MQRankSum=-4.649;QD=28.30;ReadPosRankSum=-0.853;VQSLOD=4.6665;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:23:42.44:158,42,0	1/1:4,5:10:18.01:250,18,0	0/0:11,0:11:7.95:0,8,129	0/1:12,0:12:21.05:21,0,94	1/1:4,19:23:47.99:632,48,0	1/1:1,16:17:45.15:691,45,0	1/1:4,1:5:8.94:86,9,0	1/1:6,17:24:54.11:724,54,0	0/0:8,0:8:21.05:0,21,223	1/1:5,13:20:47.97:634,48,0	1/1:1,7:8:24.04:342,24,0	0/0:14,0:14:39.10:0,39,415	0/0:15,0:15:20.44:0,20,385	1/1:2,4:6:9.03:138,9,0	1/1:3,5:8:15.05:230,15,0	1/1:4,6:10:18.06:276,18,0	1/1:3,26:29:66.22:1013,66,0	1/1:4,15:20:47.99:697,48,0	1/1:4,7:13:26.96:361,27,0	1/1:2,9:12:29.96:382,30,0	1/1:7,4:12:18.65:215,19,0	0/0:9,0:9:21.03:0,21,223	0/0:6,0:6:9:0,9,96	0/0:4,0:4:9.02:0,9,96	1/1:3,26:29:60.20:921,60,0	1/1:3,14:18:42.12:610,42,0	1/1:1,5:6:12.04:184,12,0	1/1:1,8:9:26.30:376,26,0
chr10	77013973	.	AT	A	405.02	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-2.900;DP=341;FS=8.626;HRun=7;HaplotypeScore=105.6759;InbreedingCoeff=0.4882;MQ=70.46;MQ0=0;MQRankSum=-0.122;QD=11.25;ReadPosRankSum=-0.305;VQSLOD=1.7525;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,9:20:48.11:489,48,0	0/0:8,0:8:24.01:0,24,282	0/1:16,0:15:21.38:21,0,160	0/0:9,0:7:8.36:0,8,65	0/0:20,0:20:57.12:0,57,696	0/0:16,0:16:48.15:0,48,601	0/0:5,0:5:14.98:0,15,168	0/0:20,0:20:57.02:0,57,640	0/0:8,0:8:21.05:0,21,250	0/0:18,0:18:45.14:0,45,562	0/0:11,0:11:33.06:0,33,397	0/0:13,0:13:36.11:0,36,442	0/0:12,0:12:36.11:0,36,442	0/0:4,0:4:6.02:0,6,76	0/0:5,0:5:9.03:0,9,113	0/0:6,0:6:15.05:0,15,189	0/0:29,0:29:75.24:0,75,940	0/0:17,0:17:47.95:0,48,546	0/0:12,0:12:30.06:0,30,360	0/0:11,0:11:29.97:0,30,339	0/0:7,0:7:18.53:0,19,227	0/0:7,0:7:21.07:0,21,264	0/0:5,0:5:15.05:0,15,189	0/0:3,0:3:5.99:0,6,50	0/0:27,0:27:69.15:0,69,848	0/0:16,0:16:35.92:0,36,394	0/0:5,0:5:11.97:0,12,131	0/0:10,0:10:25.55:0,26,324
chr10	77014010	.	A	AT	4421.27	PASS	AB=0.708;AC=36;AF=0.667;AN=54;BaseQRankSum=5.532;DP=303;FS=19.065;HRun=2;HaplotypeScore=89.2761;InbreedingCoeff=0.6886;MQ=60.02;MQ0=0;MQRankSum=-1.570;QD=18.42;ReadPosRankSum=2.396;VQSLOD=3.7532;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:45.14:0,45,556	1/1:3,3:6:4.22:113,4,0	0/0:6,0:6:14.71:0,15,141	0/0:6,0:5:9:0,9,84	1/1:9,13:22:34.14:378,34,0	1/1:6,10:16:23.87:367,24,0	1/1:1,9:10:18.20:260,18,0	0/1:19,13:33:56.73:364,0,57	0/0:4,0:4:12.04:0,12,149	1/1:5,6:11:22.61:210,23,0	1/1:5,8:13:12.40:186,12,0	0/0:9,0:9:27.07:0,27,322	0/0:11,0:11:33.08:0,33,373	0/1:3,2:5:5.43:46,0,5	1/1:1,2:3:8.98:82,9,0	1/1:0,5:5:15.03:161,15,0	1/1:6,14:20:42.62:464,43,0	1/1:9,15:23:32.34:475,32,0	1/1:4,5:10:3.23:162,3,0	1/1:4,1:5:9:79,9,0	1/1:1,3:5:2.45:56,2,0	0/0:5,0:5:15.03:0,15,163	0/0:2,0:2:3.01:0,3,37	./.	1/1:10,13:23:30.01:398,30,0	1/1:5,5:11:7.89:183,8,0	1/1:0,7:7:21.05:222,21,0	1/1:4,7:11:18.33:217,18,0
chr10	77014017	.	A	AAT	6774.95	PASS	AB=0.623;AC=29;AF=0.518;AN=56;BaseQRankSum=3.552;DP=297;FS=24.691;HRun=0;HaplotypeScore=79.1781;InbreedingCoeff=0.2891;MQ=61.73;MQ0=0;MQRankSum=-3.660;QD=29.08;ReadPosRankSum=4.945;VQSLOD=3.7378;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.13:0,54,761	0/1:2,3:5:26.86:117,0,27	0/0:6,0:6:11.92:0,12,132	0/0:4,0:4:8.20:0,8,72	1/1:7,15:22:11.94:576,12,0	0/1:3,10:13:8.41:434,0,8	1/1:1,9:10:5.53:351,6,0	0/1:17,15:32:99:550,0,222	0/0:6,0:6:18.05:0,18,250	1/1:2,8:11:17.75:390,18,0	1/1:6,9:15:7.83:463,8,0	0/0:9,0:9:27.09:0,27,403	0/0:9,0:9:24.08:0,24,358	0/1:2,3:5:27.17:119,0,27	1/1:2,2:4:12.03:149,12,0	1/1:0,5:5:15.05:219,15,0	1/1:4,15:19:27.06:609,27,0	1/1:7,18:24:0.09:692,0,0	0/1:7,5:13:24.42:344,0,24	0/1:2,2:4:5.43:107,0,5	0/1:2,3:6:0.20:200,0,0	0/0:6,0:6:18.04:0,18,230	0/0:2,0:2:6.02:0,6,90	0/0:2,0:2:6.02:0,6,90	0/1:5,14:19:20.28:556,0,20	0/1:3,6:10:13.07:311,0,13	1/1:0,7:7:21.07:304,21,0	1/1:1,7:8:6.83:285,7,0
chr10	77015537	.	AT	A	956.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.119;DP=616;FS=0.735;HRun=2;HaplotypeScore=58.5665;InbreedingCoeff=0.9998;MQ=85.72;MQ0=0;MQRankSum=-3.594;QD=31.89;ReadPosRankSum=0.270;VQSLOD=3.2034;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:81.26:1051,81,0	0/0:13,0:13:39.09:0,39,559	0/0:24,0:24:62.74:0,63,780	0/0:16,0:16:42.14:0,42,587	0/0:22,0:22:63.21:0,63,941	0/0:21,0:21:63.21:0,63,943	0/0:15,0:15:42.11:0,42,588	0/0:28,0:28:84.23:0,84,1181	0/0:30,0:30:90.30:0,90,1347	0/0:26,0:26:72.24:0,72,1075	0/0:18,0:18:51.17:0,51,763	0/0:32,0:32:96.33:0,96,1439	0/0:14,0:14:42.14:0,42,629	0/0:24,0:24:72.24:0,72,1061	0/0:22,0:22:66.19:0,66,916	0/0:30,0:30:90.30:0,90,1330	0/0:32,0:32:96.29:0,96,1414	0/0:21,0:21:63.21:0,63,942	0/0:14,0:14:42.14:0,42,626	0/0:18,0:18:54.18:0,54,809	0/0:27,0:27:78.26:0,78,1169	0/0:24,0:24:72.24:0,72,1079	0/0:19,0:19:54.18:0,54,809	0/0:20,0:20:57.19:0,57,854	0/0:19,0:19:52.72:0,53,750	0/0:16,0:16:48.16:0,48,720	0/0:24,0:24:72.24:0,72,1079	0/0:17,0:17:51.13:0,51,697
chr10	77016758	.	T	TA	2063.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.734;DP=707;FS=1.762;HRun=4;HaplotypeScore=67.3506;InbreedingCoeff=0.9993;MQ=77.53;MQ0=0;MQRankSum=-4.168;QD=33.83;ReadPosRankSum=0.829;VQSLOD=4.2915;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,56:61:99:2159,160,0	0/0:10,0:10:30.09:0,30,340	0/0:22,0:22:48.13:0,48,532	0/0:20,0:20:50.82:0,51,530	0/0:26,0:26:75.19:0,75,833	0/0:23,0:23:69.15:0,69,760	0/0:29,0:29:78.19:0,78,864	0/0:27,0:27:69.19:0,69,775	0/0:26,0:26:75.20:0,75,841	0/0:29,0:29:81.22:0,81,912	0/0:22,0:22:60.08:0,60,656	0/0:22,0:22:66.19:0,66,749	0/0:28,0:28:81.23:0,81,916	0/0:25,0:25:63.18:0,63,714	0/0:23,0:23:63.16:0,63,705	0/0:26,0:26:72.17:0,72,797	0/0:26,0:26:69.18:0,69,771	0/0:30,0:30:90.21:0,90,996	0/0:17,0:17:48.11:0,48,526	0/0:25,0:25:69.20:0,69,782	0/0:32,0:32:93.23:0,93,1026	0/0:18,0:18:48.14:0,48,544	0/0:23,0:23:66.12:0,66,731	0/0:36,0:36:99:0,105,1191	0/0:25,0:25:75.20:0,75,840	0/0:13,0:13:36.09:0,36,398	0/0:28,0:28:81.22:0,81,910	0/0:15,0:15:45.13:0,45,510
chr10	77019867	.	TA	T	1096.19	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.884;DP=879;FS=4.108;HRun=5;HaplotypeScore=79.8985;InbreedingCoeff=0.9996;MQ=85.42;MQ0=0;MQRankSum=-4.842;QD=26.74;ReadPosRankSum=1.600;VQSLOD=3.6562;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,40:41:99:1191,105,0	0/0:13,0:13:36.12:0,36,491	0/0:30,0:30:81.24:0,81,1074	0/0:24,0:24:60.19:0,60,803	0/0:32,0:32:84.27:0,84,1132	0/0:37,0:37:99:0,108,1478	0/0:28,0:28:81.24:0,81,1076	0/0:43,0:43:99:0,123,1665	0/0:33,0:33:87.29:0,87,1190	0/0:40,0:40:99:0,114,1522	0/0:22,0:21:60.20:0,60,816	0/0:37,0:37:99:0,99,1354	0/0:30,0:30:87.29:0,87,1183	0/0:36,0:36:99:0,102,1378	0/0:23,0:23:63.20:0,63,846	0/0:40,0:40:99:0,114,1559	0/0:38,0:38:99:0,108,1442	0/0:30,0:30:84.24:0,84,1115	0/0:32,0:31:87.29:0,87,1188	0/0:32,0:32:96.32:0,96,1312	0/0:25,0:25:72.23:0,72,969	0/0:32,0:32:93.30:0,93,1258	0/0:19,0:19:57.19:0,57,779	0/0:41,0:41:99:0,120,1627	0/0:24,0:24:69.23:0,69,943	0/0:52,0:52:99:0,156,2088	0/0:34,0:34:93.27:0,93,1222	0/0:11,0:11:33.11:0,33,451
chr10	77020068	.	T	TTTG	2001.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.246;DP=673;FS=0.651;HRun=0;HaplotypeScore=95.2998;InbreedingCoeff=0.9998;MQ=82.38;MQ0=0;MQRankSum=-5.400;QD=50.03;ReadPosRankSum=1.070;VQSLOD=5.6501;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:40:99:2096,99,0	0/0:15,0:15:42.12:0,42,674	0/0:26,0:26:58.95:0,59,918	0/0:13,0:13:38.99:0,39,528	0/0:38,0:38:99:0,105,1746	0/0:28,0:28:84.29:0,84,1432	0/0:29,0:29:84.26:0,84,1368	0/0:24,0:24:69.19:0,69,1006	0/0:20,0:20:60.18:0,60,972	0/0:21,0:21:63.20:0,63,1035	0/0:21,0:21:60.20:0,60,1010	0/0:27,0:27:78.24:0,78,1265	0/0:22,0:22:63.22:0,63,1074	0/0:27,0:27:81.26:0,81,1331	0/0:24,0:24:60.21:0,60,1020	0/0:24,0:24:69.24:0,69,1176	0/0:17,0:17:45.15:0,45,767	0/0:21,0:21:60.15:0,60,965	0/0:26,0:26:78.24:0,78,1209	0/0:29,0:29:84.28:0,84,1402	0/0:22,0:22:66.21:0,66,1074	0/0:18,0:18:54.18:0,54,919	0/0:26,0:26:78.25:0,78,1267	0/0:26,0:26:75.24:0,75,1252	0/0:20,0:20:60.20:0,60,1008	0/0:28,0:28:84.26:0,84,1334	0/0:26,0:26:75.23:0,75,1226	0/0:15,0:15:39.11:0,39,599
chr10	77021684	.	C	CAG	1426.68	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.113;DP=756;FS=0.714;HRun=0;HaplotypeScore=102.2965;InbreedingCoeff=0.9946;MQ=87.60;MQ0=0;MQRankSum=-0.942;QD=37.54;ReadPosRankSum=2.044;VQSLOD=5.8033;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,2125	0/0:9,0:9:24.08:0,24,391	0/0:32,0:32:96.19:0,96,1386	0/0:25,0:25:69.15:0,69,1023	1/1:1,18:20:45.15:816,45,0	0/0:23,0:23:69.20:0,69,1074	0/0:25,0:25:72.25:0,72,1171	0/0:20,0:20:57.18:0,57,896	0/0:37,0:37:99:0,111,1755	0/0:21,0:21:63.17:0,63,957	0/0:13,0:13:33.07:0,33,465	0/0:46,0:46:99:0,135,2165	0/0:35,0:35:99:0,105,1636	0/0:41,0:41:99:0,108,1700	0/0:33,0:33:93.30:0,93,1485	0/0:27,0:27:72.25:0,72,1170	0/0:41,0:41:99:0,111,1731	0/0:29,0:29:84.23:0,84,1290	0/0:14,0:14:42.14:0,42,685	0/0:19,0:19:57.18:0,57,905	0/0:65,0:65:99:0,169,2637	0/0:14,0:14:36.11:0,36,562	0/0:15,0:15:45.14:0,45,709	0/0:33,0:33:99:0,99,1560	1/1:0,18:18:39.13:732,39,0	0/0:25,0:25:72.25:0,72,1173	0/0:24,0:24:72.23:0,72,1148	0/0:6,0:6:18.06:0,18,293
chr10	77021751	.	AGGAG	A	918.48	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.846;DP=706;FS=3.709;HRun=0;HaplotypeScore=115.5911;InbreedingCoeff=0.9290;MQ=63.38;MQ0=1;MQRankSum=-0.573;QD=31.67;ReadPosRankSum=-0.852;VQSLOD=3.4248;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,19:29:66.08:1013,66,0	0/0:6,0:6:9.02:0,9,181	0/0:27,0:21:20.68:0,21,893	0/0:33,0:23:41.88:0,42,801	0/0:26,0:26:42.11:0,42,1208	0/0:24,0:24:48.15:0,48,1183	0/0:26,0:26:54.18:0,54,1296	0/0:26,0:26:59.99:0,60,1066	0/0:26,0:26:75.23:0,75,1765	0/0:29,0:29:72.20:0,72,1646	0/0:16,0:16:45.07:0,45,1015	0/0:45,0:45:99:0,132,3152	0/0:32,0:32:87.24:0,87,1964	0/0:30,0:30:48.05:0,48,1078	0/0:34,0:34:57.17:0,57,1373	0/0:30,0:30:45.02:0,45,1043	0/0:30,0:28:72.22:0,72,1702	0/0:16,0:16:24.03:0,24,487	0/0:16,0:16:41.70:0,42,757	0/0:14,0:14:27.04:0,27,634	0/0:51,0:51:99:0,132,2974	0/0:20,0:20:60.11:0,60,1388	0/0:13,0:13:36.08:0,36,765	0/0:34,0:34:99:0,99,2290	0/0:12,0:12:29.98:0,30,635	0/0:29,0:28:70.70:0,71,1647	0/0:21,0:21:24.08:0,24,512	0/0:11,0:11:18.06:0,18,468
chr10	77021805	.	ATG	A	367.55	PASS	AB=0.883;AC=4;AF=0.071;AN=56;BaseQRankSum=3.447;DP=593;FS=0.822;HRun=0;HaplotypeScore=168.5937;InbreedingCoeff=-0.0795;MQ=90.14;MQ0=1;MQRankSum=-5.239;QD=3.91;ReadPosRankSum=-3.120;VQSLOD=2.5533;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:18.18:0,18,309	0/0:4,0:4:6.01:0,6,66	0/0:32,0:33:96.22:0,96,1725	0/0:24,0:24:63.12:0,63,1099	0/0:9,0:9:7.87:0,8,167	0/0:19,0:19:11.53:0,12,443	0/0:23,0:23:29.02:0,29,382	0/1:28,13:41:99:380,0,1071	0/0:24,0:24:72.25:0,72,1461	0/0:16,0:16:44.80:0,45,708	0/0:8,0:8:12.03:0,12,166	0/0:41,0:41:99:0,123,2444	0/0:41,0:41:99:0,120,2373	0/0:23,0:23:36.06:0,36,436	0/0:26,0:26:30.09:0,30,436	0/0:24,0:24:32.29:0,32,388	0/0:19,0:18:35.32:0,35,462	0/1:15,0:15:9.71:10,0,190	0/0:12,0:12:36.05:0,36,606	0/0:9,0:9:17.78:0,18,198	0/1:19,8:27:73.01:73,0,372	0/0:20,0:20:57.20:0,57,1137	0/0:14,0:14:42.13:0,42,797	0/0:41,0:41:99:0,123,2404	0/0:10,0:10:10.64:0,11,198	0/0:23,0:22:57.16:0,57,967	0/0:15,0:15:15.04:0,15,176	0/1:11,0:11:1.99:2,0,185
chr10	77021808	.	C	CGCCGTCTGCAGCAAGCAGAA	45089.94	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-6.312;DP=778;FS=21.163;HRun=0;HaplotypeScore=258.4678;InbreedingCoeff=0.9557;MQ=80.65;MQ0=1;MQRankSum=-14.357;QD=83.35;ReadPosRankSum=-1.450;VQSLOD=3.0524;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,8:40:30.06:1987,30,0	1/1:0,2:9:6.02:576,6,0	0/0:31,0:31:81.26:0,81,3072	0/0:23,0:23:54.18:0,54,2062	1/1:1,3:21:18.02:461,18,0	1/1:2,11:35:33.11:3062,33,0	1/1:3,10:36:39.09:3411,39,0	1/1:37,0:37:99:5630,102,0	0/0:25,0:25:72.22:0,72,3448	1/1:1,1:27:65.75:3764,66,0	1/1:2,2:15:9.03:612,9,0	0/0:44,0:44:99:0,123,5305	0/0:41,0:41:99:0,117,5531	1/1:1,9:32:33.07:2885,33,0	1/1:3,6:40:18.06:1725,18,0	1/1:3,8:34:26.90:2322,27,0	1/1:6,8:26:33.11:2434,33,0	1/1:2,4:21:15.05:1352,15,0	1/1:2,2:18:51.17:2828,51,0	1/1:2,5:18:24.08:1332,24,0	1/1:27,0:27:39.13:1768,39,0	0/0:19,0:19:51.18:0,51,2606	0/0:13,0:13:39.13:0,39,1891	0/0:41,0:41:99:0,108,5528	1/1:2,6:26:20.92:1496,21,0	1/1:3,4:33:87.30:5078,87,0	1/1:1,5:27:18.06:1501,18,0	1/1:3,3:17:9.03:864,9,0
chr10	77021811	.	CT	C	667.61	PASS	AB=0.665;AC=2;AF=0.036;AN=56;BaseQRankSum=0.568;DP=635;FS=6.476;HRun=1;HaplotypeScore=162.3242;InbreedingCoeff=-0.0451;MQ=85.75;MQ0=1;MQRankSum=-2.890;QD=10.27;ReadPosRankSum=-3.297;VQSLOD=0.3190;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,2:33:14.16:0,14,144	0/0:9,0:9:8.49:0,8,49	0/0:28,0:28:80.05:0,80,1241	0/0:24,0:24:59.93:0,60,897	0/0:18,0:18:21.59:0,22,277	0/0:29,0:29:36.44:0,36,203	0/0:25,0:25:27.45:0,27,120	0/1:22,17:39:99:655,0,406	0/0:28,0:28:84.19:0,84,1191	0/0:14,0:14:35.34:0,35,411	0/0:11,0:11:12.17:0,12,133	0/0:45,0:45:99:0,135,2086	0/0:42,0:42:99:0,120,1887	0/0:22,0:22:33.62:0,34,173	0/0:21,0:21:16.47:0,16,72	0/0:21,0:21:27.92:0,28,154	0/0:18,1:18:22.82:0,23,101	0/0:13,0:13:17.26:0,17,151	0/0:11,0:11:29.55:0,30,302	0/0:16,0:16:28.05:0,28,237	0/1:11,15:26:99:102,0,128	0/0:18,0:18:54.16:0,54,837	0/0:13,0:13:39.13:0,39,623	0/0:39,0:39:99:0,117,1846	0/0:25,0:25:26.83:0,27,208	0/0:18,0:18:47.05:0,47,496	0/0:19,0:19:17.45:0,17,128	0/0:9,0:9:8.23:0,8,36
chr10	77023981	.	GTTTTT	G	13095.64	PASS	AB=0.958;AC=41;AF=0.732;AN=56;BaseQRankSum=4.892;DP=440;FS=2.714;HRun=11;HaplotypeScore=109.7079;InbreedingCoeff=0.8735;MQ=66.14;MQ0=1;MQRankSum=-8.668;QD=39.56;ReadPosRankSum=2.203;VQSLOD=3.8307;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,18:23:57.16:1003,57,0	1/1:3,3:6:18.06:319,18,0	0/0:22,0:14:29.83:0,30,567	0/1:22,0:13:10.40:10,0,168	1/1:2,6:8:15.04:273,15,0	1/1:6,15:21:57.18:1006,57,0	1/1:5,8:13:33.10:574,33,0	1/1:2,27:29:78.72:1370,79,0	0/0:17,0:17:48.16:0,48,1309	1/1:2,14:16:42.14:751,42,0	1/1:1,9:10:27.09:478,27,0	0/0:9,0:10:27.09:0,27,752	0/0:21,0:22:54.19:0,54,1546	1/1:2,13:15:27.09:488,27,0	1/1:6,14:20:51.16:908,51,0	1/1:3,23:26:3.49:925,3,0	1/1:9,14:23:57.17:987,57,0	1/1:6,5:11:24.07:419,24,0	1/1:3,14:17:42.13:745,42,0	1/1:0,17:17:48.15:820,48,0	1/1:10,5:15:21.04:375,21,0	0/0:13,0:13:36.09:0,36,935	0/0:7,0:7:21.07:0,21,586	0/0:16,0:17:36.06:0,36,820	1/1:3,6:9:21.06:375,21,0	1/1:3,8:11:24.07:427,24,0	1/1:7,7:14:39.12:677,39,0	1/1:0,4:4:9.03:164,9,0
chr10	77024006	.	GTTTT	G	4581.55	PASS	AB=0.684;AC=35;AF=0.625;AN=56;BaseQRankSum=4.330;DP=514;FS=17.911;HRun=19;HaplotypeScore=145.0587;InbreedingCoeff=0.8206;MQ=61.91;MQ0=6;MQRankSum=-6.349;QD=14.10;ReadPosRankSum=2.997;VQSLOD=0.4777;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,1:30:36.69:306,37,0	1/1:2,3:6:10.04:107,10,0	0/0:44,0:23:6.57:0,7,161	0/0:32,0:13:12.27:0,12,95	0/0:5,0:10:22.04:0,22,173	1/1:6,9:18:32.01:327,32,0	1/1:7,14:22:24.48:282,24,0	1/1:24,8:35:36.34:413,36,0	0/0:14,0:15:30.10:0,30,564	1/1:8,4:13:12.54:142,13,0	1/1:4,5:12:17.30:183,17,0	0/0:12,0:11:24.05:0,24,424	0/0:22,0:26:48.12:0,48,796	1/1:11,5:17:24.31:233,24,0	1/1:6,10:19:39.75:420,40,0	1/1:14,7:23:13.68:319,14,0	1/1:10,12:23:30.60:340,31,0	1/1:6,5:12:17.33:197,17,0	1/1:9,2:12:9.68:107,10,0	1/1:10,9:21:25.33:293,25,0	1/1:5,10:15:25.27:278,25,0	0/0:10,0:11:15.05:0,15,248	0/0:8,0:12:32.94:0,33,496	0/0:14,1:23:3.88:0,4,495	0/1:7,1:13:8.43:8,0,194	1/1:7,9:17:6.11:221,6,0	1/1:5,10:16:36.84:406,37,0	0/0:3,0:3:0:0,0,0
chr10	77025099	.	A	AAT	19251.53	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=-8.970;DP=528;FS=8.678;HRun=0;HaplotypeScore=59.2551;InbreedingCoeff=0.8241;MQ=75.29;MQ0=1;MQRankSum=-0.042;QD=43.56;ReadPosRankSum=2.693;VQSLOD=6.4063;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:96.33:1839,96,0	1/1:0,6:6:14.97:214,15,0	0/1:14,0:10:9.35:9,0,71	0/1:11,0:10:9.71:10,0,101	1/1:0,1:19:50.97:538,51,0	1/1:0,30:30:72.25:1384,72,0	1/1:0,15:15:30.10:573,30,0	1/1:0,24:24:72.16:1181,72,0	0/0:12,0:12:36.06:0,36,454	1/1:0,26:26:75.17:1242,75,0	1/1:0,15:16:42.07:711,42,0	0/0:21,0:21:63.06:0,63,805	0/0:16,0:16:48.14:0,48,674	1/1:1,12:13:30.10:574,30,0	1/1:0,24:24:63.22:1208,63,0	1/1:0,15:16:42.14:793,42,0	1/1:0,17:17:36.12:692,36,0	1/1:1,21:22:48.16:922,48,0	1/1:0,20:21:63.19:1143,63,0	1/1:0,25:27:78.01:1380,78,0	1/1:0,13:13:33.11:632,33,0	0/0:5,0:5:15.05:0,15,221	0/0:13,0:13:39.08:0,39,516	0/0:19,0:19:57.19:0,57,845	1/1:0,0:16:30.09:358,30,0	1/1:0,29:30:89.40:1465,89,0	1/1:0,32:33:90.31:1700,90,0	1/1:0,12:12:36.12:686,36,0
chr10	77026587	.	TA	T	611.08	PASS	AB=0.916;AC=6;AF=0.107;AN=56;BaseQRankSum=7.756;DP=456;FS=12.809;HRun=9;HaplotypeScore=50.6436;InbreedingCoeff=0.5722;MQ=84.22;MQ0=0;MQRankSum=-0.218;QD=8.86;ReadPosRankSum=2.557;VQSLOD=0.5434;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:75.21:0,75,855	0/0:2,0:2:6.02:0,6,69	0/0:22,0:19:29.78:0,30,263	0/1:21,0:21:9.65:10,0,262	1/1:3,18:21:45.01:412,45,0	0/0:15,0:15:39.09:0,39,430	0/0:22,0:22:63.13:0,63,703	0/0:32,1:33:50.69:0,51,791	0/0:13,0:13:30.09:0,30,346	0/0:14,0:14:39.11:0,39,443	0/0:18,0:18:51.14:0,51,579	0/0:14,0:14:42.12:0,42,476	0/0:11,0:11:30.09:0,30,344	0/0:19,0:19:48.11:0,48,525	0/0:16,0:16:48.12:0,48,536	0/0:13,0:13:27.04:0,27,297	0/0:21,0:21:45.13:0,45,519	0/0:12,0:12:27.01:0,27,295	0/0:24,1:26:29.70:0,30,589	0/0:10,0:10:30.09:0,30,346	0/0:19,2:21:23.68:0,24,516	0/0:12,0:12:36.08:0,36,397	0/0:10,1:11:5.62:0,6,309	0/0:12,0:12:33.08:0,33,369	1/1:1,11:12:33.02:302,33,0	0/1:12,2:14:21.84:22,0,270	0/0:15,0:15:39.12:0,39,450	0/0:5,0:5:9.03:0,9,104
chr10	77026694	.	G	GA	4094.06	PASS	AB=0.655;AC=27;AF=0.482;AN=56;BaseQRankSum=-6.117;DP=532;FS=8.911;HRun=13;HaplotypeScore=59.7214;InbreedingCoeff=0.2121;MQ=65.06;MQ0=10;MQRankSum=1.247;QD=10.63;ReadPosRankSum=-0.543;VQSLOD=2.3233;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:11,24:39:22.34:370,0,22	1/1:6,3:9:8.31:82,8,0	0/0:33,0:11:13.92:0,14,113	0/1:24,0:9:26.87:30,0,27	0/0:19,0:19:52.59:0,53,354	0/1:6,17:26:1.39:179,0,1	0/1:6,11:17:22.27:229,0,22	0/1:9,17:27:7.87:328,0,8	0/0:10,0:12:16.88:0,17,107	0/1:7,13:22:8.91:273,0,9	0/1:6,10:17:28.92:167,0,29	0/0:20,0:20:44.44:0,44,300	0/0:11,0:11:17.78:0,18,123	1/1:4,11:16:0.29:133,0,0	1/1:5,8:13:23.86:209,24,0	1/1:5,15:20:6.91:349,7,0	0/1:11,13:25:5.43:219,0,5	0/1:8,15:24:24.16:238,0,24	0/1:11,9:23:64.32:214,0,64	1/1:10,9:20:35.01:331,35,0	1/1:1,4:5:9.01:84,9,0	0/0:12,0:12:20.74:0,21,142	0/0:13,0:15:35.82:0,36,222	0/0:12,0:12:17.79:0,18,123	0/0:10,1:12:28:0,28,184	1/1:8,17:26:13.13:407,13,0	1/1:9,14:23:8.31:196,8,0	0/1:4,1:8:5.13:57,0,5
chr10	77026813	.	TC	T	10186.10	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=7.017;DP=573;FS=4.437;HRun=7;HaplotypeScore=63.2785;InbreedingCoeff=0.9765;MQ=75.96;MQ0=4;MQRankSum=-2.729;QD=25.09;ReadPosRankSum=1.666;VQSLOD=5.6135;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:60.14:612,60,0	1/1:1,3:4:6.01:61,6,0	0/0:31,1:17:30.71:0,31,400	0/0:44,0:23:24.03:0,24,254	1/1:3,30:33:81.01:789,81,0	1/1:1,24:25:66.05:649,66,0	1/1:2,25:27:63.14:643,63,0	1/1:4,15:18:42.07:417,42,0	0/0:14,0:14:30.10:0,30,377	1/1:2,14:16:36.07:367,36,0	1/1:0,12:12:33.03:325,33,0	0/0:16,0:16:48.15:0,48,603	0/0:12,0:12:36.10:0,36,438	1/1:2,16:18:38.96:382,39,0	1/1:5,21:26:63.03:619,63,0	1/1:1,26:27:66.15:673,66,0	1/1:1,24:25:66.15:671,66,0	1/1:0,28:28:78.18:795,78,0	1/1:0,17:17:51.08:511,51,0	1/1:3,27:30:81.13:814,81,0	1/1:0,9:9:24.05:245,24,0	0/0:12,0:12:30.07:0,30,351	0/0:23,0:23:54.09:0,54,658	0/0:14,0:14:39.12:0,39,491	1/1:0,18:18:48.11:490,48,0	1/1:2,13:15:42.07:418,42,0	1/1:2,21:23:57.13:581,57,0	1/1:3,5:8:12.03:122,12,0
chr10	77027039	.	G	GA	1654.06	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.785;DP=640;FS=12.104;HRun=5;HaplotypeScore=62.0619;InbreedingCoeff=0.9985;MQ=88.26;MQ0=0;MQRankSum=-1.136;QD=35.96;ReadPosRankSum=0.291;VQSLOD=2.6505;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1128	0/0:9,0:9:24.06:0,24,257	0/0:22,0:22:49.93:0,50,520	0/0:25,0:26:51.12:0,51,546	1/1:1,29:30:90.29:1184,90,0	0/0:20,0:20:54.12:0,54,572	0/0:30,0:30:75.18:0,75,806	0/0:27,0:27:63.14:0,63,670	0/0:20,0:20:51.08:0,51,530	0/0:19,0:18:54.13:0,54,574	0/0:11,0:11:30.07:0,30,322	0/0:31,0:31:84.21:0,84,903	0/0:18,0:18:54.10:0,54,563	0/0:16,0:16:48.12:0,48,514	0/0:28,0:28:78.19:0,78,838	0/0:23,0:22:66.17:0,66,709	0/0:40,0:40:99:0,114,1225	0/0:28,0:28:78.19:0,78,838	0/0:17,0:17:39.09:0,39,418	0/0:22,0:22:60.14:0,60,635	0/0:40,0:40:99:0,114,1225	0/0:19,0:19:54.14:0,54,580	0/0:19,0:19:51.10:0,51,532	0/0:25,0:25:72.18:0,72,774	1/1:0,16:16:45.15:592,45,0	0/0:20,0:20:60.15:0,60,645	0/0:16,0:16:39.09:0,39,419	0/0:12,0:12:33.08:0,33,354
chr10	77027874	.	GGTGTGTGTGTGTGTGTGTGT	G	4649.09	PASS	AB=0.916;AC=27;AF=0.540;AN=50;BaseQRankSum=4.548;DP=497;FS=1.035;HRun=0;HaplotypeScore=219.2556;InbreedingCoeff=0.5793;MQ=59.84;MQ0=39;MQRankSum=-3.859;QD=19.70;ReadPosRankSum=1.944;VQSLOD=3.8891;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:8.95:0,9,67	1/1:3,2:4:5.98:178,6,0	0/0:20,0:13:5.89:0,6,89	0/0:29,0:21:6.02:0,6,80	0/1:21,1:24:0.01:0,0,0	0/0:9,6:14:0:0,0,0	./.	./.	0/0:13,0:11:12.04:0,12,843	1/1:17,7:22:17.92:579,18,0	1/1:10,2:13:3.48:99,3,0	0/0:13,0:12:22.32:0,22,1354	0/0:16,0:14:24.08:0,24,1284	1/1:4,2:8:6.01:117,6,0	1/1:8,2:11:3.01:75,3,0	1/1:12,2:15:12.02:441,12,0	1/1:18,4:17:14.96:652,15,0	1/1:17,1:16:12.04:558,12,0	0/1:18,1:18:22.90:324,0,23	0/1:8,0:8:99:119,0,188	./.	0/0:13,0:13:21.07:0,21,1151	0/0:14,0:13:15.03:0,15,814	0/0:37,0:35:60.21:0,60,4017	1/1:10,0:13:3.01:46,3,0	1/1:20,3:23:21.49:794,21,0	1/1:11,6:15:12.04:514,12,0	1/1:6,0:7:3.01:153,3,0
chr10	77027922	.	TGAGAGAGAGAGAGAGAGA	T	2281.85	PASS	AB=0.783;AC=16;AF=0.348;AN=46;BaseQRankSum=4.230;DP=468;FS=0.000;HRun=0;HaplotypeScore=190.2355;InbreedingCoeff=0.2460;MQ=33.88;MQ0=67;MQRankSum=-3.671;QD=11.13;ReadPosRankSum=2.111;VQSLOD=2.4641;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:18:12.04:0,12,529	./.	./.	./.	0/0:10,0:9:3.48:0,3,43	0/1:15,1:15:0:0,0,0	./.	0/0:13,0:12:1.55:0,2,4	0/0:13,0:9:3.48:0,3,143	1/1:18,0:16:5.97:279,6,0	0/1:9,2:13:0:0,0,0	0/0:15,0:13:9.49:0,9,123	0/0:8,0:6:2.97:0,3,33	0/0:13,4:15:0.94:0,1,2	0/1:10,5:15:0.01:82,0,0	0/1:11,7:19:40.35:277,0,40	0/1:23,5:18:65.53:191,0,66	1/1:15,3:11:3.86:284,4,0	1/1:10,1:11:5.80:269,6,0	0/0:8,4:13:4.82:0,5,17	0/0:40,0:29:0.45:0,0,2	./.	0/0:9,0:8:3.01:0,3,128	0/0:52,0:45:42.14:0,42,1607	0/1:16,0:18:9.82:10,0,106	1/1:18,5:22:2.99:875,3,0	1/1:13,1:15:2.43:137,2,0	0/0:13,0:6:0:0,0,0
chr10	77028793	.	TG	T	12111.14	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=15.257;DP=669;FS=8.730;HRun=7;HaplotypeScore=104.7035;InbreedingCoeff=0.9731;MQ=93.47;MQ0=0;MQRankSum=-5.217;QD=26.44;ReadPosRankSum=5.181;VQSLOD=4.3902;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,41:44:99:1194,117,0	1/1:0,10:10:30.07:306,30,0	0/0:38,0:38:91.86:0,92,1020	0/0:21,0:21:51.01:0,51,592	1/1:2,22:24:63.14:643,63,0	1/1:0,18:18:48.11:490,48,0	1/1:2,28:30:72.16:735,72,0	1/1:5,20:25:60.11:603,60,0	0/0:22,0:22:60.18:0,60,742	1/1:1,19:21:60.06:588,60,0	1/1:1,13:14:33.07:336,33,0	0/0:33,0:33:90.27:0,90,1119	0/0:25,0:25:75.24:0,75,941	1/1:3,24:27:63.14:643,63,0	1/1:1,22:23:60.13:612,60,0	1/1:3,25:28:75.17:765,75,0	1/1:1,35:36:93.21:948,93,0	1/1:0,16:16:48.11:490,48,0	1/1:2,18:20:57.13:581,57,0	1/1:0,21:21:63.14:642,63,0	1/1:2,20:22:57.13:582,57,0	0/0:29,0:29:84.24:0,84,1028	0/0:26,0:26:69.20:0,69,840	0/0:17,0:17:45.11:0,45,526	1/1:2,19:21:51.11:519,51,0	1/1:2,22:24:66.15:671,66,0	1/1:6,26:32:71.65:733,72,0	1/1:0,2:2:3.48:31,3,0
chr10	77029256	.	C	CT	14744.26	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=9.090;DP=698;FS=3.479;HRun=1;HaplotypeScore=115.7111;InbreedingCoeff=0.9235;MQ=78.56;MQ0=3;MQRankSum=-4.030;QD=32.91;ReadPosRankSum=1.500;VQSLOD=4.6250;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,4:35:93.86:845,94,0	1/1:2,6:8:18.06:249,18,0	0/0:36,0:31:49.23:0,49,593	0/1:23,0:19:12.36:12,0,229	0/0:31,0:30:70.79:0,71,377	1/1:0,23:23:60.20:826,60,0	1/1:0,24:24:63.21:866,63,0	1/1:0,25:25:75.19:951,75,0	0/0:25,0:25:69.17:0,69,845	1/1:0,25:25:75.21:984,75,0	1/1:0,15:15:39.53:516,40,0	0/0:21,0:21:63.17:0,63,776	0/0:24,0:24:72.20:0,72,891	1/1:1,27:28:63.18:855,63,0	1/1:0,33:33:87.29:1206,87,0	1/1:1,21:22:64.46:871,64,0	1/1:3,23:26:67.16:914,67,0	1/1:0,25:25:66.22:911,66,0	1/1:1,20:21:57.11:713,57,0	1/1:0,28:28:84.11:1073,84,0	1/1:0,19:19:45.15:626,45,0	0/0:21,0:21:56.63:0,57,730	0/0:22,0:22:63.12:0,63,730	0/0:34,0:34:99:0,102,1252	0/0:36,0:35:51.39:0,51,317	1/1:0,29:29:84.24:1106,84,0	1/1:2,25:27:64.11:852,64,0	1/1:0,10:11:27.09:367,27,0
chr10	77029257	.	T	TAA	1988.37	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.506;DP=703;FS=3.037;HRun=9;HaplotypeScore=176.4848;InbreedingCoeff=0.9522;MQ=77.82;MQ0=3;MQRankSum=2.129;QD=26.87;ReadPosRankSum=-1.573;VQSLOD=1.4995;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:39.82:0,40,167	0/0:6,0:6:15.02:0,15,55	0/0:38,0:30:38.38:0,38,401	0/0:23,1:20:11.40:0,11,197	1/1:7,27:34:82.12:1077,82,0	0/0:23,0:23:51.77:0,52,198	0/0:25,0:25:34.68:0,35,181	0/0:25,0:25:39.24:0,39,196	0/0:25,0:25:63.08:0,63,653	0/0:25,0:25:62.86:0,63,279	0/0:15,0:15:30.20:0,30,124	0/0:21,0:21:54.13:0,54,575	0/0:25,0:25:63.13:0,63,662	0/0:26,0:26:51.77:0,52,200	0/0:33,0:33:77.20:0,77,303	0/0:22,0:22:58.32:0,58,243	0/0:25,0:25:57.97:0,58,245	0/0:25,0:25:54.27:0,54,201	0/0:20,0:20:38.97:0,39,181	0/0:28,0:28:65.34:0,65,255	0/0:19,0:19:36.87:0,37,137	0/0:20,0:21:51.08:0,51,598	0/0:22,0:22:45.08:0,45,479	0/0:35,0:35:70.44:0,70,964	1/1:4,33:38:71.68:1033,72,0	0/0:29,0:29:60.93:0,61,266	0/0:26,0:26:54.43:0,54,216	0/0:10,0:10:10.32:0,10,59
chr10	77029263	.	AAAAGAAAG	A	1592.50	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-2.179;DP=708;FS=6.167;HRun=0;HaplotypeScore=251.5712;InbreedingCoeff=0.3589;MQ=75.62;MQ0=3;MQRankSum=-3.524;QD=17.12;ReadPosRankSum=-7.762;VQSLOD=0.3264;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:6,32:38:84.10:1672,84,0	0/1:7,0:7:23.84:24,0,384	0/0:37,0:28:55.06:0,55,1391	0/0:28,0:21:34.30:0,34,912	0/0:32,0:31:22.77:0,23,2135	0/0:24,0:24:22.28:0,22,1945	0/0:24,0:24:54.37:0,54,2150	0/0:25,0:25:31.28:0,31,1872	0/0:24,0:24:69.18:0,69,2641	0/0:23,0:23:56.62:0,57,2181	0/0:14,0:14:24.62:0,25,1182	0/0:21,0:21:63.18:0,63,2145	0/0:24,0:24:72.21:0,72,2588	0/0:25,0:25:18.29:0,18,1697	0/0:33,0:33:21.67:0,22,2532	0/1:22,0:22:4.63:5,0,1648	0/1:26,0:26:3.96:4,0,2029	0/0:24,0:24:13.39:0,13,1921	0/0:21,0:21:36.44:0,36,1490	0/0:28,0:28:22.38:0,22,2173	0/0:20,0:20:4.28:0,4,1391	0/0:22,0:22:33.03:0,33,2380	0/0:22,0:22:54.13:0,54,1727	0/0:36,0:36:95.22:0,95,3932	0/0:40,0:39:71.96:0,72,2352	0/0:33,0:33:30.70:0,31,2336	0/0:25,0:25:65.13:0,65,2074	0/0:10,0:10:18.03:0,18,855
chr10	77029786	.	CT	C	738.26	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.392;DP=574;FS=6.867;HRun=11;HaplotypeScore=64.1669;InbreedingCoeff=0.9382;MQ=69.92;MQ0=0;MQRankSum=-1.413;QD=16.41;ReadPosRankSum=1.988;VQSLOD=4.6512;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:27:48.26:0,48,694	0/0:9,0:9:27.07:0,27,288	0/0:11,0:8:14.64:0,15,106	0/0:17,0:14:19.29:0,19,106	1/1:3,17:20:47.86:387,48,0	0/0:21,0:21:45.09:0,45,466	0/0:13,0:13:30.07:0,30,314	0/0:34,1:35:55.36:0,55,773	0/0:17,0:17:36.07:0,36,370	0/0:23,0:23:57.14:0,57,607	0/0:20,1:21:32.48:0,32,537	0/0:25,0:25:57.13:0,57,600	0/0:17,2:20:26.32:0,26,469	0/0:22,1:23:38.70:0,39,607	0/0:33,0:32:81.01:0,81,827	0/0:21,0:22:53.97:0,54,558	0/0:37,0:38:71.32:0,71,904	0/0:15,0:15:39.06:0,39,403	0/0:25,0:26:44.97:0,45,455	0/0:25,1:26:41.50:0,41,633	0/0:10,0:10:27.07:0,27,288	0/0:11,0:12:29.94:0,30,302	0/0:19,0:19:42.11:0,42,448	0/0:5,0:5:12.03:0,12,128	1/1:3,21:25:58.96:473,59,0	0/0:19,0:19:48.12:0,48,512	0/0:33,0:33:93.15:0,93,948	0/0:9,0:9:8.31:0,8,208
chr10	77030055	.	T	TGCGCGCGCGCGC	1024.08	PASS	AB=0.989;AC=18;AF=0.321;AN=56;BaseQRankSum=-2.422;DP=643;FS=51.459;HRun=0;HaplotypeScore=277.5852;InbreedingCoeff=-0.3795;MQ=57.76;MQ0=16;MQRankSum=-1.845;QD=2.85;ReadPosRankSum=-6.367;VQSLOD=-0.3556;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,13:35:2.70:81,3,0	0/1:7,0:7:40.95:41,0,127	0/0:28,0:10:21.02:0,21,703	0/0:41,0:19:53.92:0,54,1625	0/0:16,0:15:1.15:0,1,3	0/1:20,0:20:60.38:60,0,150	0/1:20,0:20:24.13:24,0,96	0/1:30,0:29:53.17:283,0,53	0/0:20,0:20:51.17:0,51,1850	0/1:24,0:23:39.45:39,0,324	0/1:14,0:14:25.81:26,0,182	0/0:34,0:34:84.02:0,84,3094	0/0:23,0:23:61.98:0,62,2243	0/1:17,0:18:65.28:65,0,115	0/0:24,0:25:3.52:0,4,158	0/1:24,0:24:71.27:71,0,242	0/1:22,0:22:97.82:98,0,126	0/1:19,0:22:23.60:24,0,454	0/1:19,0:19:63.76:64,0,115	0/1:19,0:19:8.79:9,0,102	0/0:37,0:38:0.76:0,1,182	0/0:14,0:14:28.06:0,28,1070	0/0:11,0:11:27.02:0,27,901	0/0:34,0:34:99:0,102,3713	0/1:20,0:20:47.47:47,0,87	0/1:26,0:26:53.57:54,0,315	0/1:29,0:28:99:148,0,429	0/1:10,0:10:43.65:44,0,136
chr10	77030056	.	GCA	G	2331.06	PASS	AB=0.864;AC=33;AF=0.660;AN=50;BaseQRankSum=8.479;DP=628;FS=8.048;HRun=0;HaplotypeScore=155.9870;InbreedingCoeff=0.3510;MQ=56.74;MQ0=16;MQRankSum=-2.738;QD=5.84;ReadPosRankSum=0.956;VQSLOD=2.9320;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:4.21:0,4,23	1/1:4,2:7:8.86:79,9,0	./.	./.	0/0:15,0:14:0:0,0,0	1/1:10,7:19:17.88:178,18,0	1/1:16,2:19:1.82:77,2,0	./.	0/0:19,2:21:9.32:0,9,457	1/1:17,4:22:17.71:158,18,0	1/1:6,6:14:15.51:164,16,0	0/1:30,4:34:47.10:47,0,491	0/1:21,2:23:29.36:29,0,385	1/1:10,6:17:14.40:139,14,0	1/1:17,6:24:20.89:209,21,0	1/1:15,7:23:23.89:241,24,0	0/1:17,4:22:29.36:94,0,29	1/1:14,5:22:24.03:206,24,0	1/1:18,2:20:6.01:65,6,0	1/1:14,3:18:5.85:47,6,0	0/1:31,6:38:39.10:113,0,39	0/0:15,0:15:5.70:0,6,69	0/1:9,2:11:15.87:16,0,166	0/0:33,1:34:18.37:0,18,649	0/0:20,0:20:7.86:0,8,32	1/1:19,4:27:26.23:210,26,0	1/1:17,8:27:29.75:290,30,0	1/1:6,4:10:12.03:131,12,0
chr10	77031013	.	CTG	C	1513.14	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.053;DP=647;FS=0.626;HRun=0;HaplotypeScore=103.8855;InbreedingCoeff=0.9972;MQ=81.55;MQ0=1;MQRankSum=-1.356;QD=32.89;ReadPosRankSum=2.564;VQSLOD=5.6552;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1910	0/0:9,0:9:27.09:0,27,503	0/0:23,0:22:57.20:0,57,1040	0/0:23,0:23:59.52:0,60,1099	1/1:0,21:21:48.16:707,48,0	0/0:12,0:12:33.11:0,33,599	0/0:27,0:27:78.27:0,78,1453	0/0:25,0:25:75.26:0,75,1405	0/0:21,0:21:60.21:0,60,1113	0/0:37,0:37:99:0,102,1864	0/0:18,0:18:51.17:0,51,955	0/0:30,0:30:87.30:0,87,1623	0/0:22,0:22:60.21:0,60,1115	0/0:28,0:28:81.26:0,81,1479	0/0:34,0:34:99:0,102,1903	0/0:37,0:37:99:0,111,2079	0/0:22,0:22:66.23:0,66,1236	0/0:18,0:18:48.16:0,48,897	0/0:20,0:20:60.19:0,60,1058	0/0:22,0:22:66.23:0,66,1218	0/0:30,0:30:90.31:0,90,1662	0/0:12,0:12:36.12:0,36,674	0/0:17,0:17:51.17:0,51,943	0/0:17,0:17:48.16:0,48,899	1/1:0,25:24:63.21:928,63,0	0/0:26,0:26:75.26:0,75,1405	0/0:28,0:28:84.27:0,84,1526	0/0:7,0:7:21.07:0,21,393
chr10	77031404	.	A	AC	1410	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.895;DP=615;FS=5.513;HRun=0;HaplotypeScore=58.1685;InbreedingCoeff=0.9998;MQ=86.69;MQ0=0;MQRankSum=-2.691;QD=37.11;ReadPosRankSum=2.748;VQSLOD=3.6816;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.27:0,81,1131	0/0:17,0:17:51.17:0,51,712	0/0:17,0:17:44.88:0,45,578	0/0:25,0:24:69.29:0,69,838	1/1:1,20:20:57.19:909,57,0	0/0:19,0:19:57.18:0,57,781	0/0:25,0:25:75.24:0,75,1031	0/0:42,0:42:99:0,123,1658	0/0:21,0:21:63.20:0,63,861	0/0:22,0:22:66.22:0,66,923	0/0:17,0:17:48.14:0,48,653	0/0:25,0:25:75.22:0,75,1013	0/0:20,0:20:60.20:0,60,838	0/0:23,0:23:69.22:0,69,948	0/0:19,0:19:57.19:0,57,797	0/0:15,0:14:45.12:0,45,593	0/0:29,0:29:87.27:0,87,1197	0/0:20,0:20:57.19:0,57,797	0/0:25,0:25:75.23:0,75,1018	0/0:23,0:23:69.22:0,69,947	0/0:21,0:21:63.19:0,63,863	0/0:21,0:21:63.21:0,63,880	0/0:18,0:18:51.17:0,51,713	0/0:24,0:24:72.24:0,72,1005	1/1:1,16:17:39.13:623,39,0	0/0:24,0:24:72.23:0,72,993	0/0:27,0:27:81.22:0,81,1075	0/0:11,0:11:33.11:0,33,460
chr10	77032298	.	G	GATT	1216.93	PASS	AB=0.548;AC=3;AF=0.054;AN=56;BaseQRankSum=10.046;DP=803;FS=10.672;HRun=0;HaplotypeScore=137.2796;InbreedingCoeff=0.6529;MQ=83.98;MQ0=0;MQRankSum=-9.637;QD=30.42;ReadPosRankSum=1.204;VQSLOD=3.6308;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,175,3198	0/0:11,0:11:33.09:0,33,572	0/0:28,0:27:78.12:0,78,1343	0/0:21,0:21:54.16:0,54,961	0/1:0,14:17:13.53:510,0,14	0/0:36,0:36:99:0,105,1914	0/0:27,0:27:81.22:0,81,1428	0/0:35,0:35:99:0,99,1778	0/0:26,0:26:78.27:0,78,1454	0/0:34,0:34:99:0,99,1805	0/0:16,0:16:45.15:0,45,831	0/0:47,0:47:99:0,138,2472	0/0:41,0:41:99:0,117,2142	0/0:32,0:32:93.32:0,93,1728	0/0:33,0:33:96.25:0,96,1620	0/0:35,0:35:99:0,102,1881	0/0:35,0:35:99:0,105,1954	0/0:16,0:16:48.10:0,48,827	0/0:16,0:16:48.16:0,48,887	0/0:22,0:22:63.17:0,63,1064	0/0:40,0:39:99:0,117,1998	0/0:35,0:35:99:0,105,1927	0/0:17,0:17:51.17:0,51,938	0/0:28,0:28:81.26:0,81,1479	1/1:3,14:23:62.34:813,62,0	0/0:36,0:36:99:0,99,1805	0/0:33,0:33:99:0,99,1655	0/0:4,0:4:12.04:0,12,224
chr10	77032299	.	C	CTGCAAG	2016.69	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.798;DP=808;FS=3.289;HRun=0;HaplotypeScore=186.3570;InbreedingCoeff=0.9699;MQ=84.73;MQ0=0;MQRankSum=-8.720;QD=49.19;ReadPosRankSum=-0.941;VQSLOD=3.3134;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,178,4393	0/0:11,0:11:33.11:0,33,812	0/0:29,0:28:69.27:0,69,1760	0/0:22,0:22:54.18:0,54,1250	1/1:4,14:18:12.55:962,13,0	0/0:37,0:37:99:0,105,2601	0/0:28,0:28:81.28:0,81,1999	0/0:35,0:35:99:0,102,2415	0/0:26,0:26:78.27:0,78,1973	0/0:34,0:34:96.33:0,96,2454	0/0:18,0:18:45.15:0,45,1123	0/0:46,0:46:99:0,138,3419	0/0:42,0:42:99:0,120,2949	0/0:33,0:33:93.32:0,93,2378	0/0:33,0:33:96.30:0,96,2232	0/0:36,0:36:99:0,105,2625	0/0:37,0:37:99:0,105,2633	0/0:16,0:16:45.15:0,45,1121	0/0:17,0:17:51.18:0,51,1267	0/0:21,0:21:63.20:0,63,1498	0/0:37,0:36:99:0,111,2741	0/0:36,0:36:99:0,105,2653	0/0:17,0:17:51.18:0,51,1298	0/0:28,0:28:84.27:0,84,2017	1/1:9,14:23:50.02:1172,50,0	0/0:35,0:35:99:0,102,2437	0/0:30,0:30:87.30:0,87,2170	0/0:4,0:4:12.04:0,12,308
chr10	77032302	.	C	CA	259.33	PASS	AB=0.592;AC=2;AF=0.036;AN=56;BaseQRankSum=8.641;DP=815;FS=13.286;HRun=2;HaplotypeScore=109.0555;InbreedingCoeff=-0.0382;MQ=84.07;MQ0=0;MQRankSum=-8.395;QD=6.33;ReadPosRankSum=-0.486;VQSLOD=-0.5450;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,178,2451	0/0:13,0:13:39.12:0,39,528	0/0:28,0:27:78.18:0,78,998	0/0:21,0:22:54.32:0,54,711	0/1:4,14:18:70.64:172,0,71	0/0:37,0:37:99:0,111,1524	0/0:31,0:31:87.29:0,87,1214	0/0:34,0:34:99:0,102,1368	0/0:27,0:27:81.26:0,81,1115	0/0:34,0:34:99:0,102,1425	0/0:17,0:17:48.16:0,48,670	0/0:49,0:49:99:0,141,1961	0/0:41,0:41:99:0,120,1676	0/0:33,0:33:96.32:0,96,1340	0/0:32,0:32:96.32:0,96,1342	0/0:36,0:36:99:0,108,1510	0/0:36,0:36:99:0,105,1466	0/0:15,0:15:45.15:0,45,629	0/0:18,0:18:48.13:0,48,648	0/0:21,0:21:63.21:0,63,881	0/0:38,0:37:99:0,114,1577	0/0:38,0:38:99:0,114,1557	0/0:19,0:19:53.21:0,53,719	0/0:26,0:26:78.26:0,78,1091	0/1:9,13:23:99:176,0,175	0/0:34,0:34:99:0,102,1425	0/0:30,0:30:90.30:0,90,1257	0/0:6,0:6:12.04:0,12,168
chr10	77032303	.	C	CAGT	2025.39	PASS	AB=0.661;AC=2;AF=0.036;AN=56;BaseQRankSum=10.740;DP=833;FS=10.845;HRun=0;HaplotypeScore=149.7448;InbreedingCoeff=-0.0371;MQ=83.35;MQ0=0;MQRankSum=-10.467;QD=36.83;ReadPosRankSum=-2.718;VQSLOD=3.2865;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,175,3236	0/0:13,0:13:39.13:0,39,716	0/0:27,0:26:71.25:0,71,1187	0/0:23,0:23:54.18:0,54,915	0/1:11,14:25:35.91:1016,0,36	0/0:36,0:36:99:0,108,1953	0/0:31,0:31:93.28:0,93,1634	0/0:34,0:34:93.31:0,93,1703	0/0:28,0:28:81.28:0,81,1498	0/0:34,0:34:99:0,102,1873	0/0:17,0:17:48.16:0,48,894	0/0:49,0:49:99:0,147,2600	0/0:42,0:42:99:0,123,2218	0/0:33,0:33:96.33:0,96,1789	0/0:32,0:32:96.33:0,96,1789	0/0:36,0:36:99:0,108,2004	0/0:36,0:36:99:0,108,1982	0/0:15,0:15:45.15:0,45,838	0/0:19,0:19:54.15:0,54,912	0/0:21,0:21:63.22:0,63,1174	0/0:38,0:37:99:0,114,2119	0/0:37,0:37:99:0,108,1995	0/0:19,0:19:54.17:0,54,966	0/0:26,0:26:78.27:0,78,1445	0/1:16,14:30:99:1098,0,146	0/0:34,0:34:99:0,102,1896	0/0:31,0:31:90.29:0,90,1645	0/0:6,0:6:18.01:0,18,269
chr10	77032578	.	C	CAAT	2750.21	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.340;DP=866;FS=1.197;HRun=0;HaplotypeScore=124.0681;InbreedingCoeff=0.9992;MQ=88.30;MQ0=0;MQRankSum=-4.433;QD=51.89;ReadPosRankSum=-0.160;VQSLOD=5.3277;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,2361	0/0:10,0:10:27.09:0,27,450	0/0:26,0:26:56.59:0,57,1085	0/0:36,0:36:99:0,99,1488	1/1:3,26:30:84.29:1847,84,0	0/0:29,0:29:81.28:0,81,1348	0/0:43,0:43:99:0,120,1997	0/0:44,0:44:99:0,123,1913	0/0:27,0:27:78.25:0,78,1274	0/0:32,0:32:87.24:0,87,1367	0/0:21,0:21:63.20:0,63,1014	0/0:45,0:45:99:0,132,2192	0/0:34,0:34:93.30:0,93,1520	0/0:29,0:29:84.27:0,84,1367	0/0:46,0:46:99:0,132,2044	0/0:35,0:35:99:0,99,1592	0/0:24,0:24:69.21:0,69,1113	0/0:27,0:27:78.21:0,78,1239	0/0:11,0:11:30.09:0,30,468	0/0:20,0:20:51.11:0,51,820	0/0:31,0:31:78.27:0,78,1291	0/0:34,0:34:96.27:0,96,1487	0/0:24,0:24:69.22:0,69,1122	0/0:34,0:34:99:0,99,1597	1/1:3,19:23:48.12:1024,48,0	0/0:31,0:31:81.24:0,81,1273	0/0:39,0:39:99:0,117,1911	0/0:31,0:31:84.04:0,84,1241
chr10	77034564	.	AT	A	925.38	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.816;DP=616;FS=3.710;HRun=9;HaplotypeScore=91.8162;InbreedingCoeff=0.9814;MQ=73.85;MQ0=0;MQRankSum=-0.314;QD=20.12;ReadPosRankSum=0.071;VQSLOD=3.9361;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:44:99:0,126,1405	0/0:8,0:8:24.06:0,24,266	0/0:14,0:14:24.68:0,25,338	0/0:13,0:13:24:0,24,266	1/1:4,24:29:74.03:657,74,0	0/0:25,0:25:69.20:0,69,794	0/0:25,0:25:72.20:0,72,820	0/0:29,0:29:72.20:0,72,822	0/0:28,0:28:81.23:0,81,927	0/0:22,0:22:57.17:0,57,658	0/0:16,0:16:48.14:0,48,554	0/0:15,0:15:45.13:0,45,519	0/0:22,0:22:54.15:0,54,616	0/0:25,0:25:75.22:0,75,865	0/0:26,0:26:75.15:0,75,814	0/0:25,0:25:72.21:0,72,831	0/0:30,0:30:81.24:0,81,935	0/0:18,0:18:51.15:0,51,588	0/0:19,0:19:54.12:0,54,593	0/0:22,0:22:63.19:0,63,727	0/0:18,0:18:48.14:0,48,554	0/0:24,0:24:69.20:0,69,796	0/0:20,0:20:57.14:0,57,637	0/0:20,0:20:60.18:0,60,692	1/1:0,16:17:44.06:390,44,0	0/0:31,0:31:74.77:0,75,912	0/0:25,0:25:66.19:0,66,759	0/0:6,0:6:12.04:0,12,138
chr10	77034941	.	AAAAC	A	2318.80	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.406;DP=722;FS=8.172;HRun=0;HaplotypeScore=128.3587;InbreedingCoeff=0.9791;MQ=64.05;MQ0=0;MQRankSum=-1.789;QD=38.01;ReadPosRankSum=-1.067;VQSLOD=3.5446;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:62.29:0,62,1759	0/0:9,0:9:27.09:0,27,648	0/0:30,0:24:51.11:0,51,886	0/0:20,0:16:17.42:0,17,580	1/1:9,31:40:99:1567,99,0	0/0:21,0:21:60.21:0,60,1429	0/0:28,0:28:63.22:0,63,1518	0/0:31,0:31:66.23:0,66,1559	0/0:21,0:21:51.16:0,51,1170	0/0:21,0:21:57.20:0,57,1269	0/0:24,0:24:72.25:0,72,1658	0/0:34,0:34:84.27:0,84,1925	0/0:24,0:24:54.18:0,54,1262	0/0:32,0:32:75.22:0,75,1675	0/0:30,0:30:66.23:0,66,1494	0/0:28,0:28:60.18:0,60,1279	0/0:31,0:31:60.21:0,60,1457	0/0:35,0:34:69.20:0,69,1532	0/0:16,0:15:36.10:0,36,763	0/0:24,0:24:57.16:0,57,1234	0/0:17,0:17:39.13:0,39,921	0/0:31,0:31:75.25:0,75,1786	0/0:25,0:25:57.20:0,57,1300	0/0:28,0:28:63.22:0,63,1525	1/1:6,15:21:54.18:873,54,0	0/0:26,0:26:60.18:0,60,1329	0/0:39,0:39:99:0,99,2313	0/0:6,0:6:12.04:0,12,300
chr10	77035006	.	TA	T	8306.45	PASS	AB=0.843;AC=53;AF=0.946;AN=56;BaseQRankSum=-3.510;DP=641;FS=23.974;HRun=13;HaplotypeScore=83.8015;InbreedingCoeff=0.1722;MQ=69.33;MQ0=1;MQRankSum=-1.756;QD=12.96;ReadPosRankSum=4.383;VQSLOD=3.1286;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,23:29:7.25:379,7,0	1/1:0,4:4:11.93:88,12,0	0/1:19,0:18:0.99:1,0,151	0/1:6,0:7:16.31:16,0,42	1/1:17,17:35:61.86:449,62,0	1/1:5,19:24:27.47:365,27,0	1/1:3,22:25:30.48:387,30,0	1/1:12,18:30:47.66:350,48,0	1/1:3,7:10:17.88:131,18,0	1/1:9,15:24:44.58:321,45,0	1/1:3,18:21:47.68:350,48,0	1/1:8,18:26:47.67:350,48,0	0/1:9,13:22:25.56:164,0,26	1/1:2,33:36:91.51:662,92,0	1/1:4,23:29:57.72:406,58,0	1/1:4,16:20:12.30:255,12,0	1/1:3,16:19:44.74:328,45,0	1/1:4,26:30:68.58:503,69,0	1/1:6,15:22:17.15:268,17,0	1/1:3,18:22:14.25:223,14,0	1/1:2,14:16:35.77:263,36,0	1/1:4,13:18:28.79:203,29,0	1/1:8,16:26:39.55:274,40,0	1/1:3,22:26:26.56:349,27,0	1/1:4,16:20:24.97:267,25,0	1/1:10,21:31:56.59:416,57,0	1/1:14,28:44:25.70:496,26,0	1/1:1,2:3:5.96:44,6,0
chr10	77035573	.	A	AT	3447.02	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.039;DP=761;FS=0.410;HRun=5;HaplotypeScore=71.9845;InbreedingCoeff=0.9942;MQ=85.46;MQ0=0;MQRankSum=-1.782;QD=36.28;ReadPosRankSum=0.798;VQSLOD=3.2958;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,37:39:99:1338,100,0	0/0:7,0:7:18.05:0,18,193	0/0:23,0:24:66.04:0,66,651	0/0:23,0:23:47.60:0,48,491	1/1:1,26:27:78.25:1026,78,0	0/0:15,0:15:39.10:0,39,419	0/0:26,0:26:75.16:0,75,790	0/0:29,0:29:75.17:0,75,789	0/0:24,0:24:66.16:0,66,709	0/0:28,0:28:75.16:0,75,787	0/0:28,0:28:84.21:0,84,903	0/0:50,0:50:99:0,144,1523	0/0:19,0:19:54.13:0,54,580	0/0:28,0:28:75.18:0,75,806	0/0:39,0:39:99:0,108,1146	0/0:37,0:37:99:0,105,1128	0/0:25,0:25:63.13:0,63,666	0/0:22,0:22:66.17:0,66,709	0/0:23,0:23:54.13:0,54,580	0/0:38,0:38:99:0,108,1161	0/0:22,0:22:63.16:0,63,677	0/0:22,0:22:60.13:0,60,637	0/0:23,0:23:69.13:0,69,729	0/0:39,0:39:99:0,111,1193	1/1:0,28:29:84.24:1083,84,0	0/0:30,1:31:50.75:0,51,896	0/0:37,0:37:99:0,99,1021	0/0:7,0:7:18.04:0,18,193
chr10	77036158	.	TACACAC	T	2761.99	PASS	AB=0.774;AC=27;AF=0.519;AN=52;BaseQRankSum=7.130;DP=548;FS=3.718;HRun=0;HaplotypeScore=125.5603;InbreedingCoeff=0.6801;MQ=69.63;MQ0=6;MQRankSum=-6.969;QD=10.19;ReadPosRankSum=-1.839;VQSLOD=1.9764;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:14.88:0,15,246	1/1:4,6:10:5.61:122,6,0	0/0:20,0:16:0.47:0,0,1	0/0:33,0:24:3.01:0,3,39	1/1:12,0:28:6.02:84,6,0	1/1:15,7:22:9.03:184,9,0	1/1:13,7:21:9.03:160,9,0	0/0:27,0:27:3:0,3,25	0/0:15,0:14:24.08:0,24,563	1/1:13,4:17:8.53:164,9,0	1/1:9,5:15:9.03:141,9,0	0/0:21,0:21:39.11:0,39,1041	0/0:11,0:11:21.06:0,21,574	1/1:15,11:28:18.06:341,18,0	0/0:21,0:28:33.08:0,33,483	1/1:15,12:27:5.22:526,5,0	1/1:19,0:20:3.01:42,3,0	1/1:12,4:15:14.92:283,15,0	0/0:15,0:15:0:0,0,0	1/1:9,4:14:12.92:182,13,0	./.	0/0:14,0:14:27.09:0,27,555	0/0:13,0:13:12.04:0,12,317	0/0:26,0:31:45.15:0,45,1166	1/1:6,0:11:12.04:168,12,0	0/1:17,7:24:42.73:368,0,43	1/1:14,4:18:9.03:184,9,0	./.
chr10	77038300	.	TA	T	1387.23	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.290;DP=674;FS=20.597;HRun=6;HaplotypeScore=74.9868;InbreedingCoeff=0.9965;MQ=68.01;MQ0=0;MQRankSum=0.467;QD=26.17;ReadPosRankSum=2.000;VQSLOD=2.0779;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,52:53:99:1482,138,0	0/0:11,0:11:33.11:0,33,434	0/0:19,0:19:30.98:0,31,448	0/0:16,0:15:36.11:0,36,459	0/0:27,0:27:78.24:0,78,1010	0/0:22,0:22:60.20:0,60,789	0/0:29,0:29:75.24:0,75,986	0/0:35,0:35:99:0,99,1289	0/0:23,0:23:48.16:0,48,631	0/0:30,0:30:87.27:0,87,1130	0/0:28,0:28:72.21:0,72,920	0/0:27,0:27:72.22:0,72,932	0/0:24,0:24:69.22:0,69,904	0/0:21,0:21:51.15:0,51,655	0/0:33,0:33:84.25:0,84,1077	0/0:28,0:28:84.27:0,84,1105	0/0:16,0:16:45.13:0,45,576	0/0:13,0:13:36.12:0,36,474	0/0:26,0:26:75.22:0,75,969	0/0:21,0:21:51.17:0,51,670	0/0:11,0:11:30.10:0,30,395	0/0:26,0:26:60.17:0,60,760	0/0:25,0:25:69.22:0,69,907	0/0:24,0:24:60.20:0,60,789	0/0:23,0:23:63.20:0,63,828	0/0:33,0:33:90.28:0,90,1170	0/0:22,0:22:63.19:0,63,812	0/0:8,0:8:24.08:0,24,316
chr10	77039318	.	TC	T	7233.44	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=7.255;DP=551;FS=12.728;HRun=9;HaplotypeScore=56.7078;InbreedingCoeff=0.9478;MQ=86.12;MQ0=0;MQRankSum=-3.929;QD=21.46;ReadPosRankSum=0.752;VQSLOD=4.6270;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:87.22:0,87,971	1/1:0,4:4:9:82,9,0	0/0:20,0:20:57.08:0,57,617	0/0:21,0:20:2.85:0,3,263	0/0:16,1:17:17.64:0,18,438	1/1:3,14:17:42.02:384,42,0	1/1:8,23:31:31.64:469,32,0	1/1:8,20:28:62.89:563,63,0	0/0:18,1:19:23.71:0,24,525	1/1:2,15:17:42.01:380,42,0	1/1:0,10:10:27.01:247,27,0	0/0:29,0:29:69.09:0,69,741	0/0:23,1:24:38.76:0,39,690	1/1:4,29:33:75.03:685,75,0	1/1:2,21:23:54.02:494,54,0	1/1:1,29:30:81.04:741,81,0	1/1:4,31:36:89.07:802,89,0	1/1:0,11:11:30.02:275,30,0	1/1:3,7:10:21.01:192,21,0	1/1:0,10:10:30.02:274,30,0	1/1:5,34:39:90.04:824,90,0	0/0:9,0:9:24.06:0,24,266	0/0:13,0:13:36.11:0,36,415	0/0:19,0:19:51.15:0,51,587	0/0:8,0:8:24.07:0,24,277	1/1:3,16:19:48.01:437,48,0	1/1:1,15:16:36.02:329,36,0	1/1:0,3:3:6:55,6,0
chr10	77040477	.	A	AAGTCTGAC	51465.71	PASS	AB=0.544;AC=39;AF=0.696;AN=56;BaseQRankSum=-12.259;DP=745;FS=0.614;HRun=0;HaplotypeScore=163.9558;InbreedingCoeff=0.9138;MQ=76.06;MQ0=0;MQRankSum=-19.203;QD=101.11;ReadPosRankSum=0.442;VQSLOD=5.3633;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:33:66.23:2902,66,0	1/1:5,5:12:21.07:910,21,0	0/0:30,0:30:81.27:0,81,2181	0/0:23,0:23:65.88:0,66,1379	1/1:5,19:25:57.20:2459,57,0	1/1:9,23:34:87.30:3800,87,0	1/1:7,13:20:57.20:2415,57,0	1/1:16,14:35:96.32:3606,96,0	0/0:32,0:32:90.31:0,90,2536	1/1:9,17:30:81.26:3402,81,0	1/1:4,11:17:36.12:1574,36,0	0/0:35,0:35:99:0,102,2911	0/0:25,0:25:75.26:0,75,2192	1/1:8,28:42:99:4550,102,0	1/1:5,28:35:90.31:4030,90,0	0/1:5,22:31:15.63:2947,0,16	1/1:3,11:19:33.11:1471,33,0	1/1:6,8:15:27.09:1220,27,0	1/1:11,9:25:75.18:2751,75,0	1/1:8,16:25:45.15:1999,45,0	1/1:7,6:13:16.56:809,17,0	0/0:29,0:29:84.27:0,84,2372	0/0:32,0:32:93.32:0,93,2723	0/0:30,0:30:90.28:0,90,2468	1/1:2,13:19:39.13:1759,39,0	1/1:6,25:39:99:4479,117,0	1/1:10,22:34:84.29:3612,84,0	1/1:2,4:6:18.06:771,18,0
chr10	77041335	.	GA	G	10399.98	PASS	AB=0.949;AC=41;AF=0.732;AN=56;BaseQRankSum=9.734;DP=680;FS=0.385;HRun=10;HaplotypeScore=70.9441;InbreedingCoeff=0.9148;MQ=65.75;MQ0=4;MQRankSum=-2.182;QD=19.66;ReadPosRankSum=2.707;VQSLOD=5.7124;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,26:31:74.95:651,75,0	1/1:0,10:10:29.99:260,30,0	0/1:35,2:21:4.11:4,0,190	0/0:33,0:15:22.75:0,23,206	1/1:4,26:30:77.98:676,78,0	1/1:4,18:22:47.98:417,48,0	1/1:1,16:17:44.99:391,45,0	1/1:8,22:30:67.97:569,68,0	0/0:10,0:10:30.08:0,30,332	1/1:3,27:30:80.95:696,81,0	1/1:3,17:20:47.98:416,48,0	0/0:16,1:17:25.07:0,25,496	0/0:24,0:24:51.12:0,51,550	1/1:2,23:25:56.99:495,57,0	1/1:2,32:34:83.98:729,84,0	1/1:2,19:21:50.99:443,51,0	1/1:10,37:47:44.60:845,45,0	1/1:1,29:30:74.98:651,75,0	1/1:5,13:18:43.06:350,43,0	1/1:3,23:26:65.97:573,66,0	1/1:0,7:7:18:156,18,0	0/0:21,0:22:53.98:0,54,578	0/0:30,1:31:52.16:0,52,804	0/0:14,0:14:39.11:0,39,431	1/1:2,19:21:53.99:469,54,0	1/1:3,29:32:86.97:755,87,0	1/1:2,23:25:65.97:573,66,0	1/1:2,12:14:5.81:279,6,0
chr10	77043000	.	G	GAA	7942.33	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-8.052;DP=588;FS=1.316;HRun=12;HaplotypeScore=108.5654;InbreedingCoeff=0.8748;MQ=64.14;MQ0=0;MQRankSum=3.654;QD=20.11;ReadPosRankSum=-2.701;VQSLOD=3.6564;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:29:33.64:0,34,137	1/1:2,5:7:15.05:205,15,0	0/1:14,0:13:19.18:19,0,19	0/0:7,0:6:4.95:0,5,33	0/0:4,0:20:33.99:0,34,136	1/1:3,19:26:57.46:699,57,0	1/1:5,12:18:21.06:281,21,0	1/1:22,7:31:60.06:575,60,0	0/0:13,0:13:33:0,33,300	1/1:5,19:27:66.12:827,66,0	1/1:10,6:19:40.43:378,40,0	0/0:21,0:25:50.75:0,51,497	0/0:24,0:24:47.60:0,48,410	1/1:4,12:18:11.11:103,11,0	1/1:5,20:25:36.11:488,36,0	1/1:6,16:22:9.92:374,10,0	1/1:1,15:17:41.62:542,42,0	1/1:5,19:25:36.12:492,36,0	1/1:17,4:22:20.54:245,21,0	1/1:3,15:22:47.88:497,48,0	1/1:0,14:15:24.08:323,24,0	0/0:24,0:25:32.62:0,33,352	0/0:16,0:20:8.14:0,8,208	0/0:11,0:11:29.99:0,30,278	0/0:1,0:19:35:0,35,142	1/1:7,24:36:77.59:895,78,0	1/1:6,23:30:11.29:453,11,0	1/1:1,20:21:39.13:547,39,0
chr10	77043018	.	A	AGGACACTG	6455.30	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.929;DP=615;FS=1.799;HRun=0;HaplotypeScore=194.1245;InbreedingCoeff=0.9756;MQ=63.88;MQ0=0;MQRankSum=-10.311;QD=82.76;ReadPosRankSum=2.227;VQSLOD=5.2589;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,12:27:44.64:1877,45,0	0/0:8,0:8:20.99:0,21,533	0/0:10,0:11:13.99:0,14,376	0/0:7,0:7:10.28:0,10,241	1/1:7,17:27:63.17:2667,63,0	0/0:30,0:30:75.24:0,75,2052	0/0:13,0:13:39.13:0,39,955	0/0:39,0:39:99:0,105,2589	0/0:19,0:19:57.20:0,57,1498	0/0:35,0:35:96.28:0,96,2410	0/0:22,0:22:57.15:0,57,1569	0/0:32,0:32:75.26:0,75,2053	0/0:22,0:22:66.23:0,66,1853	0/0:19,0:19:29.94:0,30,844	0/0:30,0:30:63.20:0,63,1491	0/0:17,0:17:42.60:0,43,1128	0/0:17,0:17:42.14:0,42,1150	0/0:22,0:22:54.08:0,54,1491	0/0:22,0:22:57.19:0,57,1372	0/0:26,0:26:63.22:0,63,1660	0/0:19,0:19:48.13:0,48,1229	0/0:20,0:20:57.20:0,57,1570	0/0:19,0:19:54.19:0,54,1429	0/0:16,0:16:45.15:0,45,1192	1/1:11,13:24:45.13:1912,45,0	0/0:31,0:31:84.28:0,84,2293	0/0:23,0:23:45.13:0,45,1159	0/0:18,0:18:42.14:0,42,1203
chr10	77045437	.	T	TTTTG	1531.72	PASS	AB=0.592;AC=1;AF=0.018;AN=56;BaseQRankSum=-8.109;DP=708;FS=2.819;HRun=0;HaplotypeScore=109.2155;InbreedingCoeff=0.5608;MQ=60.97;MQ0=4;MQRankSum=-1.183;QD=34.04;ReadPosRankSum=1.428;VQSLOD=3.8460;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:14,30:45:1.48:1606,0,1	0/0:9,0:9:18.06:0,18,295	0/0:24,0:18:24.06:0,24,329	0/0:19,0:15:21.04:0,21,308	0/0:40,0:40:93.32:0,93,1471	0/0:21,0:21:54.17:0,54,852	0/0:15,0:15:30.10:0,30,483	0/0:29,0:29:42.14:0,42,634	0/0:14,0:14:33.11:0,33,523	0/0:32,0:32:72.25:0,72,1163	0/0:20,0:20:45.15:0,45,720	0/0:29,0:29:72.25:0,72,1154	0/0:33,0:33:84.23:0,84,1330	0/0:26,0:26:51.14:0,51,786	0/0:32,0:32:81.26:0,81,1268	0/0:28,0:28:60.20:0,60,944	0/0:26,0:25:58.07:0,58,912	0/0:25,0:24:54.18:0,54,876	0/0:23,0:24:39.11:0,39,572	0/0:28,0:28:66.22:0,66,1064	0/0:12,0:12:21.07:0,21,335	0/0:20,0:20:57.18:0,57,900	0/0:25,0:25:51.14:0,51,747	0/0:19,0:19:53.79:0,54,753	0/0:32,0:32:66.22:0,66,1042	0/0:25,0:25:63.19:0,63,960	0/0:38,0:40:96.29:0,96,1482	0/0:16,0:16:39.13:0,39,639
chr10	77046580	.	AT	A	730.17	PASS	AB=0.875;AC=3;AF=0.054;AN=56;BaseQRankSum=7.733;DP=600;FS=16.966;HRun=9;HaplotypeScore=57.7694;InbreedingCoeff=0.6537;MQ=69.52;MQ0=0;MQRankSum=-2.054;QD=15.87;ReadPosRankSum=1.715;VQSLOD=2.3229;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,36:39:90.04:824,90,0	0/0:6,0:6:18.04:0,18,199	0/1:6,1:7:6.41:6,0,187	0/0:10,0:10:20.82:0,21,201	0/0:21,1:23:57.16:0,57,648	0/0:15,0:16:41.96:0,42,465	0/0:26,0:26:60.18:0,60,692	0/0:26,0:26:69.17:0,69,768	0/0:19,1:20:20.68:0,21,492	0/0:17,0:17:45.61:0,46,520	0/0:21,0:21:54.10:0,54,591	0/0:36,0:36:99:0,99,1133	0/0:26,0:26:78.23:0,78,900	0/0:15,0:15:45.13:0,45,519	0/0:44,0:44:98.93:0,99,1392	0/0:37,0:37:99:0,102,1167	0/0:23,0:22:60.18:0,60,693	0/0:30,0:30:87.22:0,87,989	0/0:17,1:18:8.62:0,9,336	0/0:15,0:15:39.12:0,39,450	0/0:28,0:28:78.20:0,78,874	0/0:12,0:12:33.09:0,33,373	0/0:14,0:14:36.11:0,36,416	0/0:27,0:27:72.20:0,72,820	0/0:20,0:20:54.16:0,54,623	0/0:21,0:21:60.18:0,60,691	0/0:16,0:15:45.13:0,45,519	0/0:7,0:7:21.06:0,21,242
chr10	77047472	.	GCACACACA	G	9771.74	PASS	AB=0.739;AC=37;AF=0.685;AN=54;BaseQRankSum=6.632;DP=614;FS=1.508;HRun=0;HaplotypeScore=165.0986;InbreedingCoeff=0.7982;MQ=59.31;MQ0=8;MQRankSum=-10.082;QD=26.48;ReadPosRankSum=-0.838;VQSLOD=4.2871;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:43:38.63:0,39,1224	1/1:1,8:9:21.07:528,21,0	0/0:34,0:22:3.48:0,3,44	./.	1/1:6,0:13:15.05:279,15,0	1/1:9,11:20:20.21:505,20,0	1/1:8,6:15:15.05:357,15,0	1/1:25,0:24:4.30:154,4,0	0/0:16,0:18:36.12:0,36,1388	1/1:8,13:22:39.08:791,39,0	1/1:7,9:17:32.60:654,33,0	0/0:23,0:27:51.16:0,51,1665	0/0:21,0:22:51.17:0,51,1768	1/1:9,11:21:33.11:772,33,0	1/1:16,17:35:20.10:884,20,0	1/1:16,20:37:57.16:1344,57,0	0/1:11,6:17:47.97:187,0,48	1/1:8,6:12:12.04:302,12,0	1/1:5,3:8:9.02:226,9,0	1/1:8,11:20:30.06:556,30,0	1/1:24,3:27:3.01:75,3,0	0/0:17,0:20:48.05:0,48,1624	0/0:15,0:17:27.09:0,27,881	0/0:29,0:31:60.20:0,60,2080	1/1:9,0:13:15.05:279,15,0	1/1:14,12:27:36.09:789,36,0	1/1:8,10:21:42.04:937,42,0	1/1:3,3:6:6.02:151,6,0
chr10	77048595	.	TGCCTAG	T	695.30	PASS	AC=2;AF=0.042;AN=48;BaseQRankSum=4.511;DP=222;FS=0.000;HRun=0;HaplotypeScore=46.6893;InbreedingCoeff=0.5882;MQ=49.53;MQ0=4;MQRankSum=-4.629;QD=53.48;ReadPosRankSum=1.429;VQSLOD=3.1252;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:33.07:788,33,0	0/0:5,0:5:15.05:0,15,534	./.	./.	0/0:3,0:3:1.55:0,2,4	0/0:6,0:6:15.05:0,15,481	0/0:22,0:22:55.43:0,55,1788	0/0:10,0:8:24.08:0,24,843	0/0:5,0:5:9.03:0,9,271	0/0:4,0:4:12.04:0,12,452	0/0:6,0:6:15.05:0,15,484	0/0:12,0:11:24.08:0,24,898	0/0:8,0:8:12.04:0,12,400	0/0:9,0:9:24.08:0,24,888	0/0:6,0:6:18.06:0,18,586	0/0:8,0:8:24.08:0,24,903	0/0:20,0:20:57.14:0,57,1859	0/0:15,0:15:42.14:0,42,1518	0/0:9,0:9:24.08:0,24,780	0/0:3,0:3:3.01:0,3,93	0/0:13,0:13:32.94:0,33,1129	0/0:4,0:4:5.62:0,6,225	./.	0/0:13,0:13:39.13:0,39,1352	0/0:3,0:3:6.02:0,6,226	0/0:8,0:8:21.07:0,21,698	0/0:12,0:11:30.03:0,30,1127	./.
chr10	77048643	.	GGTT	G	971.57	PASS	AB=0.975;AC=35;AF=0.700;AN=50;BaseQRankSum=-5.018;DP=161;FS=1.784;HRun=0;HaplotypeScore=22.0581;InbreedingCoeff=0.3279;MQ=81.31;MQ0=3;MQRankSum=-2.301;QD=7.96;ReadPosRankSum=2.548;VQSLOD=1.5750;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:5:5.64:46,6,0	0/1:2,0:2:0:0,0,0	0/0:28,0:10:19.53:0,20,179	0/1:13,0:6:25.81:27,0,26	./.	1/1:6,0:6:6.02:82,6,0	1/1:3,11:14:3.47:28,3,0	1/1:8,0:8:6.02:81,6,0	1/1:1,0:1:3.01:46,3,0	1/1:4,0:4:6.02:80,6,0	0/1:2,0:2:0:0,0,0	1/1:2,0:2:5.99:62,6,0	0/1:5,0:5:0:0,0,0	1/1:1,0:1:3.01:45,3,0	1/1:5,0:5:8.97:119,9,0	1/1:5,0:5:15.04:209,15,0	1/1:11,0:11:0.89:3,1,0	1/1:17,1:18:8.10:123,8,0	1/1:3,0:3:3.01:45,3,0	0/0:4,0:4:1.04:0,1,3	0/1:6,1:7:0:0,0,0	0/0:1,0:1:0.47:0,0,1	0/0:2,0:2:0.20:0,0,1	1/1:3,0:3:0.72:2,1,0	./.	1/1:5,0:5:3.49:79,3,0	0/0:3,0:3:1.25:0,1,3	./.
chr10	77048644	.	GTT	G	1001.12	PASS	AB=0.635;AC=34;AF=0.708;AN=48;BaseQRankSum=-5.087;DP=151;FS=1.784;HRun=2;HaplotypeScore=19.0688;InbreedingCoeff=0.3286;MQ=83.04;MQ0=3;MQRankSum=-1.617;QD=9.02;ReadPosRankSum=3.341;VQSLOD=0.9168;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:3:5.95:65,6,0	0/1:0,1:1:0:0,0,0	0/0:27,1:10:19.94:0,20,171	0/1:15,0:6:12.89:13,0,33	./.	1/1:3,2:5:6.02:82,6,0	1/1:11,1:12:3.47:29,3,0	1/1:0,8:8:6.02:81,6,0	1/1:1,0:1:3.01:46,3,0	1/1:0,4:4:6.02:80,6,0	./.	1/1:2,0:2:6.02:79,6,0	0/1:0,5:5:0:0,0,0	1/1:1,0:1:3.01:45,3,0	1/1:4,1:5:9.03:119,9,0	1/1:5,0:5:15.05:216,15,0	1/1:0,10:10:1.25:3,1,0	1/1:1,16:17:8.37:123,8,0	1/1:1,1:2:3.01:45,3,0	0/0:0,4:4:1.04:0,1,3	0/1:1,5:7:0:0,0,0	0/0:0,1:1:0.47:0,0,1	0/0:0,2:2:0.12:0,0,1	1/1:1,1:2:0.57:2,1,0	./.	1/1:0,5:5:2.82:78,3,0	0/0:0,3:3:1.25:0,1,3	./.
chr10	77048657	.	G	GAA	174.91	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=0.236;DP=199;FS=21.894;HRun=0;HaplotypeScore=42.5057;InbreedingCoeff=0.4495;MQ=94.25;MQ0=3;MQRankSum=2.071;QD=21.86;ReadPosRankSum=-0.393;VQSLOD=1.1878;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:7:12.04:0,12,161	0/0:2,0:2:3.01:0,3,42	0/0:25,0:11:26.38:0,26,230	0/0:15,0:11:6.13:0,6,209	1/1:1,4:5:9.03:128,9,0	0/0:7,0:7:12.49:0,12,165	0/0:14,0:14:9:0,9,127	0/0:8,0:8:17.80:0,18,230	0/0:2,0:2:6.01:0,6,68	0/0:8,0:8:19.59:0,20,219	./.	0/0:4,0:4:11.77:0,12,124	0/0:7,0:7:9.03:0,9,131	0/0:4,0:4:9.03:0,9,130	0/0:7,0:7:6.44:0,6,66	0/0:10,0:10:24.08:0,24,350	0/0:10,0:10:3.48:0,3,34	0/0:17,0:17:11.68:0,12,108	0/0:4,0:4:9.03:0,9,131	0/0:7,0:7:15.05:0,15,204	0/0:11,0:11:18.02:0,18,231	0/0:1,0:1:3.01:0,3,44	0/0:2,0:2:2.94:0,3,44	0/0:3,0:3:0.47:0,0,2	1/1:3,0:3:9.03:150,9,0	0/0:7,0:7:11.61:0,12,109	0/0:3,0:3:3.01:0,3,43	0/0:5,0:5:15.04:0,15,198
chr10	77048706	.	A	ATG	802.64	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.845;DP=400;FS=6.362;HRun=0;HaplotypeScore=70.7077;InbreedingCoeff=0.9593;MQ=89.85;MQ0=0;MQRankSum=-3.504;QD=32.11;ReadPosRankSum=0.826;VQSLOD=5.5270;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:48.16:897,48,0	0/0:7,0:7:15.05:0,15,221	0/0:14,0:14:39.09:0,39,512	0/0:17,0:17:37.66:0,38,511	0/0:16,0:16:48.15:0,48,687	0/0:9,0:9:24.08:0,24,353	0/0:18,0:18:42.14:0,42,618	0/0:22,0:22:57.19:0,57,835	0/0:12,0:12:36.09:0,36,491	0/0:19,0:19:57.19:0,57,823	0/0:12,0:12:36.10:0,36,510	0/0:13,0:13:36.11:0,36,511	0/0:15,0:15:39.11:0,39,554	0/0:13,0:13:36.12:0,36,530	0/0:16,0:16:48.15:0,48,687	0/0:16,0:16:48.16:0,48,706	0/0:15,0:15:33.11:0,33,484	0/0:13,0:13:24.05:0,24,330	0/0:9,0:9:21.06:0,21,289	0/0:16,0:16:48.16:0,48,707	0/0:19,0:19:51.17:0,51,751	0/0:11,0:11:33.11:0,33,486	0/0:10,0:10:27.09:0,27,397	0/0:6,0:6:18.06:0,18,265	0/0:12,0:12:33.10:0,33,467	0/0:16,0:16:48.16:0,48,706	0/0:23,0:23:60.20:0,60,880	0/0:6,0:6:18.06:0,18,265
chr10	77049707	.	CTT	C	1416.98	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.636;DP=763;FS=7.412;HRun=5;HaplotypeScore=90.3640;InbreedingCoeff=0.9984;MQ=83.96;MQ0=0;MQRankSum=-3.481;QD=36.33;ReadPosRankSum=1.617;VQSLOD=2.8623;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:39:99:1512,108,0	0/0:12,0:12:36.12:0,36,642	0/0:28,0:28:69.15:0,69,1058	0/0:32,0:31:63.01:0,63,1355	0/0:30,0:30:87.30:0,87,1591	0/0:32,0:32:93.32:0,93,1700	0/0:26,0:26:75.26:0,75,1364	0/0:32,0:32:81.27:0,81,1451	0/0:26,0:26:72.25:0,72,1317	0/0:22,0:22:63.22:0,63,1149	0/0:23,0:23:66.22:0,66,1164	0/0:26,0:26:75.26:0,75,1372	0/0:35,0:35:99:0,105,1894	0/0:28,0:28:76.50:0,77,1370	0/0:25,0:25:72.24:0,72,1287	0/0:39,0:39:99:0,111,2026	0/0:29,0:29:87.30:0,87,1595	0/0:27,0:27:81.26:0,81,1455	0/0:24,0:24:66.23:0,66,1185	0/0:26,0:26:78.27:0,78,1415	0/0:46,0:46:99:0,132,2372	0/0:23,0:23:66.23:0,66,1181	0/0:9,0:9:27.09:0,27,491	0/0:28,0:28:78.27:0,78,1417	0/0:33,0:33:84.29:0,84,1534	0/0:33,0:33:90.30:0,90,1604	0/0:19,0:19:57.20:0,57,1036	0/0:11,0:11:30.10:0,30,546
chr10	77050770	.	GA	G	1441.30	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.915;DP=622;FS=3.960;HRun=8;HaplotypeScore=62.3690;InbreedingCoeff=0.9520;MQ=75.72;MQ0=1;MQRankSum=0.695;QD=22.52;ReadPosRankSum=1.037;VQSLOD=4.3582;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,1364	0/0:5,0:5:12.04:0,12,145	0/0:18,0:17:11.32:0,11,201	0/0:16,0:14:12.43:0,12,215	1/1:2,32:34:96.15:925,96,0	0/0:19,0:19:54.17:0,54,652	0/0:16,0:16:45.12:0,45,531	0/0:32,0:32:90.25:0,90,1058	0/0:20,0:20:60.16:0,60,711	0/0:33,0:33:93.29:0,93,1122	0/0:18,0:18:42.13:0,42,505	0/0:22,0:22:63.18:0,63,751	0/0:22,0:22:63.17:0,63,738	0/0:19,0:19:54.16:0,54,643	0/0:22,0:22:60.16:0,60,703	0/0:25,0:25:66.20:0,66,797	0/0:38,0:38:99:0,99,1179	0/0:18,0:18:54.15:0,54,640	0/0:17,0:17:48.15:0,48,579	0/0:26,0:26:69.20:0,69,821	0/0:16,0:16:45.14:0,45,543	0/0:19,0:19:45.14:0,45,538	0/0:19,0:19:45.12:0,45,526	0/0:13,0:13:39.12:0,39,471	1/1:5,25:30:66.10:637,66,0	0/0:29,0:29:75.23:0,75,902	0/0:27,0:27:75.23:0,75,906	0/0:8,0:8:24.07:0,24,288
chr10	77051687	.	CT	C	372.31	PASS	AB=0.895;AC=6;AF=0.107;AN=56;BaseQRankSum=7.462;DP=548;FS=0.665;HRun=12;HaplotypeScore=66.4705;InbreedingCoeff=0.2207;MQ=68.78;MQ0=1;MQRankSum=0.606;QD=4.09;ReadPosRankSum=0.668;VQSLOD=0.6755;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:24:57.65:443,58,0	0/0:11,0:11:21.04:0,21,208	0/1:14,1:11:15.67:16,0,23	0/0:23,0:17:11.55:0,12,73	0/0:24,3:27:1.67:0,2,375	0/0:26,0:26:44.68:0,45,437	0/0:7,0:7:21.03:0,21,207	0/0:28,0:30:48.24:0,48,607	0/1:15,3:18:23.40:23,0,315	0/0:25,1:26:28.33:0,28,461	0/0:28,0:30:59.95:0,60,587	0/0:9,3:12:4.04:0,4,177	0/0:23,0:22:48:0,48,454	0/0:11,0:11:21.04:0,21,213	0/0:24,1:25:60.11:0,60,604	0/0:19,1:20:27.84:0,28,449	0/0:31,2:33:25.69:0,26,604	0/0:23,1:24:33.84:0,34,514	0/1:13,2:15:7.33:7,0,291	0/0:18,0:18:42.04:0,42,402	0/0:7,0:7:15.03:0,15,151	0/0:9,0:10:26.87:0,27,246	0/0:9,0:9:24.05:0,24,243	0/0:16,0:16:39.05:0,39,383	0/0:24,1:25:36.98:0,37,547	0/0:21,1:22:9.83:0,10,282	0/1:16,2:17:4.33:4,0,317	0/0:21,1:22:24.81:0,25,418
chr10	77053366	.	TC	T	6939.08	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=6.186;DP=508;FS=2.050;HRun=11;HaplotypeScore=87.5231;InbreedingCoeff=0.9119;MQ=84.75;MQ0=0;MQRankSum=-0.485;QD=18.41;ReadPosRankSum=3.943;VQSLOD=5.6650;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:45.40:213,45,0	1/1:1,4:5:11.98:98,12,0	0/0:33,2:27:35.84:0,36,267	0/0:21,0:15:9.54:0,10,115	1/1:4,20:24:58.47:470,58,0	1/1:4,24:28:65.92:540,66,0	1/1:2,15:17:33.41:271,33,0	1/1:3,19:22:55.46:413,55,0	0/0:11,0:11:30.04:0,30,303	1/1:3,17:21:56.79:456,57,0	1/1:2,19:22:53.90:441,54,0	0/0:17,0:17:44.96:0,45,420	0/1:6,0:6:5.24:5,0,102	1/1:2,14:16:44.93:368,45,0	1/1:2,10:12:26.95:221,27,0	1/1:1,11:12:32.94:269,33,0	1/1:5,33:38:93.34:761,93,0	1/1:3,14:17:27.18:283,27,0	1/1:3,16:19:47.39:347,47,0	1/1:3,17:20:53.35:408,53,0	1/1:4,8:12:23.95:196,24,0	0/0:13,0:13:29.61:0,30,269	0/0:14,0:14:27.71:0,28,249	0/0:19,1:20:26.74:0,27,439	1/1:1,15:17:41.87:337,42,0	1/1:1,20:21:59.37:474,59,0	1/1:2,12:14:29.96:245,30,0	1/1:1,6:7:14.98:123,15,0
chr10	77053376	.	C	CA	559.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.592;DP=531;FS=2.598;HRun=0;HaplotypeScore=120.2145;InbreedingCoeff=0.9443;MQ=85.43;MQ0=0;MQRankSum=0.350;QD=18.64;ReadPosRankSum=0.240;VQSLOD=5.6267;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:30:59.93:654,60,0	0/0:5,0:5:14.42:0,14,77	0/0:37,0:29:37.31:0,37,448	0/0:21,0:16:15.31:0,15,183	0/0:23,0:23:53.98:0,54,268	0/0:26,0:26:65.07:0,65,324	0/0:18,0:18:36.77:0,37,182	0/0:21,0:21:51.27:0,51,247	0/0:11,0:11:30.10:0,30,408	0/0:24,0:24:62.35:0,62,277	0/0:24,0:24:56.08:0,56,274	0/0:19,0:19:48.10:0,48,615	0/0:8,0:8:22.80:0,23,236	0/0:21,0:21:57.09:0,57,298	0/0:11,0:11:25.32:0,25,124	0/0:11,0:11:30.99:0,31,149	0/0:36,0:36:93.51:0,94,466	0/0:18,0:18:42.57:0,43,215	0/0:18,0:18:50.30:0,50,233	0/0:23,0:23:52.20:0,52,257	0/0:10,0:10:25.47:0,25,127	0/0:14,0:14:42.03:0,42,494	0/0:17,0:17:39.05:0,39,437	0/0:20,0:20:56.94:0,57,709	0/0:23,0:23:50.96:0,51,255	0/0:22,0:22:58.78:0,59,277	0/0:13,0:13:31.28:0,31,159	0/0:6,0:6:14.34:0,14,73
chr10	77054070	.	A	AT	12262.30	PASS	AB=0.552;AC=37;AF=0.661;AN=56;BaseQRankSum=-0.845;DP=660;FS=5.532;HRun=8;HaplotypeScore=79.9111;InbreedingCoeff=0.9210;MQ=73.54;MQ0=0;MQRankSum=-0.795;QD=28.45;ReadPosRankSum=0.374;VQSLOD=4.9948;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,147,1345	1/1:2,5:7:12.04:138,12,0	0/0:23,0:19:16.67:0,17,172	0/0:12,0:11:23.91:0,24,209	1/1:2,18:21:53.99:603,54,0	1/1:3,18:21:53.75:599,54,0	1/1:5,17:22:51.15:589,51,0	1/1:5,27:32:81.22:923,81,0	0/0:23,0:23:63:0,63,566	1/1:4,19:23:57.17:652,57,0	1/1:2,22:24:66.15:743,66,0	0/0:39,0:39:99:0,108,988	0/0:27,0:27:69.02:0,69,632	1/1:0,19:20:54.16:617,54,0	1/1:3,21:24:63.19:727,63,0	1/1:1,13:15:38.95:430,39,0	1/1:4,28:32:72.21:831,72,0	1/1:2,29:31:84.25:969,84,0	1/1:4,23:27:69.20:796,69,0	1/1:2,21:23:60.18:692,60,0	0/1:3,13:16:9.79:405,0,10	0/0:18,0:18:42.01:0,42,384	0/0:14,0:14:33.02:0,33,302	0/0:19,0:19:51.03:0,51,467	1/1:3,21:24:57.17:658,57,0	1/1:5,13:18:39.10:438,39,0	1/1:3,27:30:78.23:897,78,0	1/1:1,20:21:48.14:554,48,0
chr10	77056706	.	AAAGAG	A	1207.95	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.950;DP=575;FS=7.478;HRun=0;HaplotypeScore=103.7202;InbreedingCoeff=0.9662;MQ=91.58;MQ0=0;MQRankSum=-1.618;QD=37.75;ReadPosRankSum=0.704;VQSLOD=3.3349;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,28:32:48.23:1303,48,0	0/0:4,0:4:12.04:0,12,372	0/0:21,0:21:54.19:0,54,1573	0/0:28,0:28:59.15:0,59,2052	0/0:13,0:13:36.12:0,36,1057	0/0:21,0:21:63.22:0,63,1952	0/0:14,0:14:36.12:0,36,1071	0/0:30,0:30:81.27:0,81,2372	0/0:20,0:20:57.18:0,57,1655	0/0:22,0:22:66.23:0,66,2025	0/0:14,0:14:42.14:0,42,1287	0/0:17,0:17:48.16:0,48,1488	0/0:21,0:21:63.22:0,63,1900	0/0:17,0:17:48.16:0,48,1487	0/0:16,0:16:48.15:0,48,1395	0/0:26,0:26:75.26:0,75,2301	0/0:25,0:25:66.17:0,66,1789	0/0:24,0:24:60.19:0,60,1745	0/0:17,0:17:48.16:0,48,1401	0/0:20,0:20:57.20:0,57,1744	0/0:22,0:21:60.14:0,60,1716	0/0:14,0:14:42.14:0,42,1256	0/0:17,0:17:45.15:0,45,1394	0/0:35,0:35:99:0,105,3211	0/0:28,0:28:84.29:0,84,2548	0/0:32,0:32:96.32:0,96,2899	0/0:15,0:15:45.13:0,45,1280	0/0:10,0:10:21.05:0,21,565
chr10	77057360	.	C	CAA	1267.87	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.538;DP=776;FS=0.000;HRun=10;HaplotypeScore=103.1868;InbreedingCoeff=0.9868;MQ=76.20;MQ0=0;MQRankSum=-2.884;QD=33.36;ReadPosRankSum=0.720;VQSLOD=3.5284;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:38:95.80:1363,96,0	0/0:16,0:16:39.04:0,39,390	0/0:20,0:22:21.21:0,21,204	0/0:22,0:22:26.31:0,26,264	0/0:31,0:34:68.73:0,69,662	0/0:21,0:22:50.82:0,51,564	0/0:30,0:31:74.80:0,75,713	0/0:34,0:35:74.74:0,75,718	0/0:24,0:25:62.87:0,63,693	0/0:39,0:39:99:0,99,986	0/0:20,0:22:44.66:0,45,491	0/0:29,0:29:53.93:0,54,519	0/0:37,0:38:77.74:0,78,833	0/0:28,0:28:69.14:0,69,702	0/0:34,0:35:89.86:0,90,958	0/0:27,0:29:68.55:0,69,720	0/0:23,0:26:47.30:0,47,645	0/0:24,0:24:57.10:0,57,580	0/0:31,0:32:63.93:0,64,701	0/0:19,0:19:51.10:0,51,519	0/0:18,0:18:39.05:0,39,397	0/0:22,0:24:41.52:0,42,461	0/0:24,0:25:62.90:0,63,616	0/0:37,0:38:95.69:0,96,909	0/0:25,0:25:60.04:0,60,595	0/0:40,0:40:99:0,99,1001	0/0:31,0:31:71.78:0,72,767	0/0:8,0:8:18.01:0,18,183
chr10	77057787	.	CCA	C	321.31	PASS	AB=0.965;AC=16;AF=0.296;AN=54;BaseQRankSum=4.782;DP=443;FS=11.596;HRun=0;HaplotypeScore=104.2089;InbreedingCoeff=-0.2171;MQ=66.94;MQ0=0;MQRankSum=-1.620;QD=1.28;ReadPosRankSum=8.854;VQSLOD=-0.1114;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:61.42:0,61,285	1/1:3,0:3:5.60:20,6,0	0/0:9,0:8:9.47:0,9,164	0/1:11,0:9:4.05:4,0,131	0/1:7,0:7:0.95:7,0,1	0/1:14,1:15:6.68:7,0,106	0/1:27,1:28:32.83:33,0,127	0/0:10,0:10:5.89:0,6,98	0/0:15,0:15:14.93:0,15,144	0/0:13,0:13:1.91:0,2,162	0/0:9,0:9:11.97:0,12,95	0/0:25,0:25:16.43:0,16,142	0/0:19,0:19:25.49:0,25,205	0/1:24,1:25:40.88:59,0,41	0/1:16,0:16:4.98:5,0,96	0/1:14,3:17:56.78:97,0,57	0/1:18,0:18:26.79:29,0,27	0/1:31,0:31:63.77:64,0,116	0/1:6,1:7:4.09:4,0,94	0/1:7,0:7:6.47:6,0,38	0/1:42,1:43:19.06:19,0,134	0/0:8,0:8:5.30:0,5,59	0/0:6,0:6:6.48:0,6,105	0/0:22,0:22:18.73:0,19,210	0/0:16,0:16:22.58:0,23,186	0/1:14,1:15:55.28:55,0,109	0/1:9,0:9:26.04:57,0,26	./.
chr10	77060359	.	A	AT	12840.82	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-13.593;DP=571;FS=4.427;HRun=6;HaplotypeScore=53.2298;InbreedingCoeff=0.9045;MQ=79.98;MQ0=0;MQRankSum=-1.084;QD=29.79;ReadPosRankSum=-0.400;VQSLOD=5.2613;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:45.14:566,45,0	1/1:0,6:6:18.06:226,18,0	0/1:13,0:12:11.07:11,0,132	0/0:15,0:16:13.54:0,14,230	1/1:2,18:20:51.16:636,51,0	1/1:2,16:19:54.16:664,54,0	1/1:1,9:10:21.07:264,21,0	1/1:2,38:40:99:1329,114,0	0/0:16,0:16:48.11:0,48,490	1/1:2,24:26:72.23:905,72,0	1/1:4,20:24:57.14:694,57,0	0/0:31,0:31:90.17:0,90,903	0/0:26,0:26:66.11:0,66,662	1/1:1,23:24:29.58:686,30,0	1/1:1,14:14:33.11:415,33,0	1/1:1,19:20:51.16:642,51,0	1/1:3,21:24:57.18:717,57,0	1/1:1,26:27:63.20:792,63,0	1/1:2,21:23:63.19:778,63,0	1/1:3,13:16:36.11:447,36,0	1/1:0,18:18:42.13:528,42,0	0/0:17,0:17:48.11:0,48,489	0/0:22,0:22:66.04:0,66,649	0/0:12,0:12:36.08:0,36,367	1/1:3,16:19:42.13:528,42,0	1/1:2,28:30:84.26:1044,84,0	1/1:5,27:33:66.18:814,66,0	1/1:2,4:6:12.04:151,12,0
chr10	77060651	.	T	TA	15664.41	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-13.267;DP=558;FS=0.770;HRun=2;HaplotypeScore=47.0219;InbreedingCoeff=0.9970;MQ=89.88;MQ0=0;MQRankSum=-3.288;QD=37.75;ReadPosRankSum=0.860;VQSLOD=5.1088;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:45.15:648,45,0	1/1:0,7:7:21.07:302,21,0	0/0:25,0:25:54.46:0,54,681	0/0:18,0:18:17.53:0,18,404	1/1:0,28:28:81.23:1143,81,0	1/1:2,25:27:54.18:777,54,0	1/1:2,13:15:39.13:562,39,0	1/1:1,27:28:72.96:1115,73,0	0/0:21,0:21:60.19:0,60,744	1/1:1,20:21:60.20:864,60,0	1/1:1,18:19:54.18:777,54,0	0/0:13,0:13:39.12:0,39,483	0/0:17,0:17:48.15:0,48,594	1/1:1,19:20:45.15:648,45,0	1/1:1,27:27:78.26:1123,78,0	1/1:1,21:21:45.15:648,45,0	1/1:2,22:24:60.20:863,60,0	1/1:1,19:20:57.19:820,57,0	1/1:4,17:21:51.14:711,51,0	1/1:0,18:18:48.16:691,48,0	1/1:1,25:26:63.21:907,63,0	0/0:12,0:12:33.09:0,33,393	0/0:20,0:20:57.16:0,57,690	0/0:17,0:17:48.15:0,48,595	1/1:0,16:16:48.16:691,48,0	1/1:1,25:26:75.25:1080,75,0	1/1:0,26:26:69.23:992,69,0	1/1:0,7:7:21.07:302,21,0
chr10	77061106	.	G	GAAAA	7764.82	PASS	AB=0.942;AC=40;AF=0.741;AN=54;BaseQRankSum=8.048;DP=378;FS=7.122;HRun=7;HaplotypeScore=103.1386;InbreedingCoeff=0.7254;MQ=38.92;MQ0=14;MQRankSum=-4.774;QD=26.32;ReadPosRankSum=0.722;VQSLOD=1.6765;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,0:2:6.01:63,6,0	0/1:1,0:2:0:0,0,0	0/1:2,0:1:0:0,0,0	1/1:15,6:20:25.38:442,25,0	1/1:20,5:24:44.04:836,44,0	1/1:15,1:14:35.10:404,35,0	1/1:8,6:14:29.99:493,30,0	0/0:14,0:14:23.04:0,23,307	1/1:13,6:18:39.06:736,39,0	1/1:12,3:14:18.05:300,18,0	0/0:22,0:22:35.50:0,35,533	0/1:17,0:17:11.14:11,0,224	1/1:7,4:11:26.22:393,26,0	1/1:13,2:15:29.28:410,29,0	1/1:12,7:20:39:570,39,0	1/1:5,6:9:12.04:281,12,0	0/1:14,6:18:2.57:655,0,3	1/1:9,1:9:20.98:272,21,0	1/1:4,2:6:12.04:208,12,0	1/1:9,0:8:11.86:124,12,0	0/0:8,0:8:9.02:0,9,139	0/0:16,0:16:19.24:0,19,277	0/0:23,0:21:23.81:0,24,350	1/1:10,4:13:23.41:357,23,0	1/1:11,3:12:21.02:324,21,0	1/1:13,7:21:42.07:721,42,0	1/1:6,2:7:12.03:165,12,0
chr10	77061111	.	AAAGAAC	A	6547.55	PASS	AB=0.857;AC=39;AF=0.722;AN=54;BaseQRankSum=9.922;DP=370;FS=12.632;HRun=0;HaplotypeScore=107.1608;InbreedingCoeff=0.7234;MQ=39.95;MQ0=14;MQRankSum=-5.363;QD=25.09;ReadPosRankSum=4.771;VQSLOD=3.4813;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,0:2:6.02:111,6,0	1/1:3,0:2:1.82:5,2,0	0/0:5,0:2:3.01:0,3,51	1/1:21,0:20:9.10:336,9,0	1/1:23,0:22:3.13:649,3,0	1/1:17,1:16:44.63:557,45,0	1/1:11,1:12:32.26:400,32,0	0/0:17,0:17:43.29:0,43,584	1/1:18,1:19:19.33:545,19,0	1/1:15,0:14:26.83:286,27,0	0/0:25,0:25:54.87:0,55,1028	0/0:13,0:13:34.56:0,35,535	1/1:13,2:15:39.03:481,39,0	1/1:9,3:12:30.03:409,30,0	1/1:15,0:15:37.38:447,37,0	1/1:9,0:7:12.03:132,12,0	1/1:19,0:17:4.99:493,5,0	1/1:8,0:7:20.78:199,21,0	1/1:6,0:5:12.04:169,12,0	0/1:5,1:5:39.87:112,0,40	0/0:9,0:9:2.43:0,2,189	0/0:17,0:17:27.30:0,27,448	0/0:23,0:21:26.80:0,27,564	1/1:16,0:15:27.04:285,27,0	1/1:10,0:8:21.02:270,21,0	1/1:22,0:22:33.44:440,33,0	1/1:9,0:7:12.04:225,12,0
chr10	77061112	.	AAGAAC	A	7168.74	PASS	AB=0.952;AC=41;AF=0.759;AN=54;BaseQRankSum=9.890;DP=365;FS=3.923;HRun=0;HaplotypeScore=96.8205;InbreedingCoeff=0.6052;MQ=39.96;MQ0=14;MQRankSum=-3.881;QD=24.89;ReadPosRankSum=3.864;VQSLOD=4.2530;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,2:2:6.02:128,6,0	1/1:3,0:2:2.92:17,3,0	0/0:5,0:2:3.01:0,3,39	1/1:13,5:17:10.07:368,10,0	1/1:9,14:22:4.44:726,4,0	1/1:10,7:15:44.92:638,45,0	1/1:11,1:12:32.08:409,32,0	0/0:18,0:18:36.12:0,36,502	1/1:12,4:16:20.65:558,21,0	1/1:4,11:14:26.86:313,27,0	0/0:24,0:24:40.15:0,40,892	0/0:13,0:13:26.81:0,27,457	1/1:14,1:15:39.05:529,39,0	1/1:12,0:12:30.04:389,30,0	1/1:11,4:15:37.51:513,38,0	1/1:9,0:7:12.04:149,12,0	1/1:16,3:17:5.02:529,5,0	1/1:7,1:7:20.78:207,21,0	1/1:5,1:5:12.04:188,12,0	0/1:5,1:5:38.60:109,0,39	0/1:10,0:10:3.83:4,0,208	0/0:17,0:17:27.26:0,27,403	0/1:22,0:20:6.26:6,0,460	1/1:17,1:17:27.05:332,27,0	1/1:8,2:8:21.02:286,21,0	1/1:13,10:23:34.52:515,35,0	1/1:4,5:7:12.04:256,12,0
chr10	77061113	.	AGAAC	A	7096.77	PASS	AB=1.000;AC=43;AF=0.796;AN=54;BaseQRankSum=9.954;DP=380;FS=1.067;HRun=0;HaplotypeScore=96.2485;InbreedingCoeff=0.3605;MQ=39.25;MQ0=15;MQRankSum=-3.455;QD=21.00;ReadPosRankSum=2.507;VQSLOD=4.5775;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,0:2:6.02:104,6,0	1/1:2,1:2:3.01:36,3,0	0/0:6,0:3:2.94:0,3,26	1/1:17,1:17:11.27:334,11,0	1/1:22,1:22:6.02:641,6,0	1/1:18,0:16:47.97:621,48,0	1/1:14,0:14:38.36:472,38,0	0/0:18,0:18:13.39:0,13,417	1/1:15,1:16:21.48:524,21,0	1/1:18,1:18:38.82:418,39,0	0/1:24,0:24:1.74:2,0,757	0/1:14,0:14:24.81:25,0,357	1/1:16,0:16:39.52:529,40,0	1/1:10,1:11:30.03:358,30,0	1/1:16,0:16:40.40:494,40,0	1/1:9,0:7:12.04:150,12,0	1/1:21,0:19:11.03:584,11,0	1/1:8,0:7:20.78:195,21,0	1/1:6,1:5:12.04:164,12,0	0/1:7,0:6:35.30:95,0,35	0/1:11,0:11:14.20:14,0,202	0/0:18,0:18:28.95:0,29,357	0/1:22,0:20:34.13:34,0,402	1/1:15,2:16:27.05:329,27,0	1/1:10,0:8:24.02:290,24,0	1/1:23,0:22:35:479,35,0	1/1:9,0:7:12.04:208,12,0
chr10	77061126	.	A	ACC	1336.58	PASS	AB=0.976;AC=23;AF=0.426;AN=54;BaseQRankSum=6.309;DP=481;FS=18.804;HRun=0;HaplotypeScore=125.2404;InbreedingCoeff=-0.1119;MQ=48.47;MQ0=16;MQRankSum=-2.559;QD=4.00;ReadPosRankSum=3.677;VQSLOD=1.4890;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,1:4:10.75:74,11,0	0/0:19,0:8:17.10:0,17,152	0/0:18,0:10:16.88:0,17,183	0/1:18,0:18:5.24:152,0,5	0/1:21,0:20:44.49:44,0,165	0/1:18,0:17:4.60:82,0,5	1/1:21,0:22:28.12:209,28,0	0/0:16,0:16:42.12:0,42,547	0/1:20,0:19:84.28:84,0,90	0/1:18,0:17:20.33:59,0,20	0/0:27,0:27:65.19:0,65,842	0/0:13,0:12:33.04:0,33,424	0/1:20,0:20:26.87:27,0,102	0/1:23,0:23:42.29:42,0,98	0/1:27,0:27:59.72:60,0,131	0/1:13,0:12:15.28:15,0,109	0/1:26,0:24:83.94:91,0,84	0/1:10,1:10:73.73:76,0,74	0/1:13,0:12:31.99:40,0,32	0/1:11,0:10:17.65:18,0,69	0/0:12,0:12:21:0,21,241	0/0:18,0:18:36.09:0,36,471	0/0:24,0:22:48.16:0,48,650	0/1:12,6:18:10.09:233,0,10	1/1:14,1:13:5.87:113,6,0	0/1:26,0:25:18.72:19,0,294	1/1:9,0:8:14.24:72,14,0
chr10	77061127	.	A	AGAACC	6781.93	PASS	AB=0.757;AC=27;AF=0.500;AN=54;BaseQRankSum=-1.297;DP=512;FS=9.452;HRun=0;HaplotypeScore=153.8338;InbreedingCoeff=0.1053;MQ=48.72;MQ0=16;MQRankSum=-3.006;QD=18.58;ReadPosRankSum=3.036;VQSLOD=4.0437;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,1:4:12.03:189,12,0	0/0:20,0:8:0.44:0,0,176	0/0:18,0:10:6.21:0,6,250	0/1:12,5:20:6.04:305,0,6	0/1:21,0:20:10.17:297,0,10	1/1:14,0:17:33.28:379,33,0	1/1:11,8:25:48.89:954,49,0	0/0:15,0:15:39.13:0,39,742	0/1:16,0:23:15.39:422,0,15	1/1:15,0:17:4.63:443,5,0	0/0:27,0:27:69.19:0,69,1253	0/0:13,0:12:33.11:0,33,612	0/1:18,0:20:18.34:248,0,18	0/1:10,9:26:99:482,0,102	0/1:14,9:33:61.69:363,0,62	0/1:8,5:14:76.55:132,0,77	0/1:15,5:24:67.14:341,0,67	0/1:9,3:14:83.13:405,0,83	0/1:10,0:16:28.28:325,0,28	1/1:10,1:11:8.48:267,8,0	0/0:12,0:12:21.06:0,21,333	0/0:18,0:18:36.12:0,36,698	0/0:24,0:22:48.15:0,48,877	1/1:18,0:18:4.55:315,5,0	1/1:9,5:15:25.99:526,26,0	0/1:23,0:25:99:224,0,173	1/1:9,0:8:15.01:164,15,0
chr10	77061128	.	A	ACC	1169.07	PASS	AB=0.960;AC=21;AF=0.389;AN=54;BaseQRankSum=-0.454;DP=517;FS=24.800;HRun=0;HaplotypeScore=139.3889;InbreedingCoeff=-0.3639;MQ=49.12;MQ0=16;MQRankSum=1.678;QD=3.10;ReadPosRankSum=1.032;VQSLOD=1.0946;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:5,0:5:1.16:25,1,0	0/1:20,0:8:5.61:6,0,119	0/1:18,0:10:5.42:5,0,158	0/1:19,0:19:23.77:24,0,69	0/0:21,0:20:30.80:0,31,244	0/1:18,0:17:50.99:51,0,54	0/1:25,1:26:9.99:252,0,10	0/0:15,0:15:39.13:0,39,518	0/1:24,0:23:53.42:53,0,85	0/1:16,2:17:33.58:170,0,34	0/0:27,0:27:69.22:0,69,931	0/0:15,0:14:33.11:0,33,446	0/1:13,0:20:41.99:42,0,94	0/1:26,0:26:71.87:72,0,134	0/1:32,1:33:94.84:95,0,212	0/1:15,0:14:35.98:36,0,175	0/1:26,0:24:46.42:46,0,178	0/1:15,1:15:81.53:82,0,89	0/1:16,1:16:69.33:85,0,69	0/1:12,1:12:37.24:109,0,37	0/0:12,0:12:20.64:0,21,230	0/0:18,0:18:36.08:0,36,467	0/0:25,0:23:48.14:0,48,628	0/1:19,0:18:13.38:13,0,85	1/1:15,1:14:10.98:130,11,0	0/1:26,2:27:30:30,0,320	0/0:7,0:6:0.69:0,1,12
chr10	77067384	.	G	GCACACACACACACACA	11563.12	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-0.038;DP=753;FS=37.684;HRun=0;HaplotypeScore=301.2587;InbreedingCoeff=0.7979;MQ=55.88;MQ0=10;MQRankSum=-6.790;QD=22.37;ReadPosRankSum=-6.357;VQSLOD=1.9287;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:40:4.83:72,5,0	1/1:11,0:11:10.28:325,10,0	0/0:28,0:12:3.04:0,3,85	0/0:25,0:14:9.03:0,9,178	1/1:25,0:24:6.02:117,6,0	1/1:18,0:21:9.03:490,9,0	1/1:37,0:41:14.46:1008,14,0	1/1:33,0:29:42.58:884,43,0	0/0:19,0:22:39.13:0,39,1534	1/1:13,1:21:29.69:920,30,0	1/1:18,0:18:9.02:220,9,0	0/0:38,0:39:78.24:0,78,2862	0/0:25,0:31:69.21:0,69,2627	1/1:23,3:26:8.81:512,9,0	1/1:18,2:20:6.02:430,6,0	1/1:24,6:32:17.12:1043,17,0	1/1:19,2:22:12.03:645,12,0	1/1:21,5:27:30.10:1635,30,0	1/1:15,0:14:9.03:376,9,0	1/1:27,0:27:0.43:1,0,0	1/1:43,0:42:15.96:287,16,0	0/0:21,0:23:39.13:0,39,1612	0/0:17,0:18:39.12:0,39,1285	0/0:50,0:50:63.47:0,63,3685	1/1:16,0:21:3.01:209,3,0	1/1:29,0:36:39.99:1356,40,0	1/1:21,0:21:18.06:753,18,0	1/1:8,0:7:15.05:281,15,0
chr10	77070166	.	CGTGTGTGT	C	3755	PASS	AB=0.680;AC=25;AF=0.521;AN=48;BaseQRankSum=6.381;DP=591;FS=8.858;HRun=0;HaplotypeScore=144.0275;InbreedingCoeff=0.5747;MQ=62.17;MQ0=17;MQRankSum=-2.875;QD=12.77;ReadPosRankSum=0.701;VQSLOD=2.3250;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:11.72:0,12,82	./.	0/0:22,0:16:6.49:0,6,116	0/0:18,0:12:17.09:0,17,315	1/1:2,11:13:0.47:1,0,0	./.	1/1:13,14:27:2.45:70,2,0	0/1:25,15:35:54.09:616,0,54	0/0:27,0:25:57.17:0,57,1585	1/1:10,10:20:30.10:711,30,0	0/1:10,11:20:0:0,0,0	0/0:20,0:20:33.10:0,33,940	0/0:19,0:18:36.11:0,36,1126	1/1:8,11:19:2.25:70,2,0	./.	1/1:10,16:25:5.92:141,6,0	1/1:20,0:20:29.97:692,30,0	1/1:8,10:17:6.02:147,6,0	1/1:10,5:15:15:320,15,0	1/1:8,11:19:3.48:40,3,0	0/0:13,14:26:2.99:0,3,23	0/0:31,0:31:51.16:0,51,1436	0/0:17,0:17:30.08:0,30,761	0/0:31,0:30:57.17:0,57,1651	./.	1/1:14,12:21:26.81:676,27,0	0/1:10,11:20:23.14:198,0,23	1/1:2,4:5:3.01:74,3,0
chr10	77071193	.	G	GA	1687.30	PASS	AB=0.953;AC=38;AF=0.679;AN=56;BaseQRankSum=10.642;DP=517;FS=4.229;HRun=12;HaplotypeScore=94.2864;InbreedingCoeff=0.4064;MQ=49.07;MQ0=16;MQRankSum=-10.727;QD=4.50;ReadPosRankSum=-2.135;VQSLOD=1.5577;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:25:33.31:33,0,56	1/1:8,0:8:14.38:73,14,0	0/0:22,0:5:0.02:0,0,48	0/1:15,0:2:3.54:13,0,4	1/1:23,0:23:3.72:66,4,0	1/1:4,1:6:5.62:27,6,0	1/1:14,1:15:25.23:142,25,0	1/1:15,7:23:23.40:192,23,0	0/0:18,0:18:35.57:0,36,251	0/1:14,0:16:20.42:28,0,20	1/1:20,0:18:15.60:83,16,0	0/0:34,0:37:66.58:0,67,470	0/1:20,2:22:13.66:14,0,237	1/1:12,0:11:11.62:70,12,0	1/1:17,0:20:8.98:128,9,0	1/1:14,0:15:25.06:121,25,0	1/1:22,1:23:4.42:91,4,0	0/1:10,0:10:10.14:33,0,10	1/1:13,0:12:7.51:156,8,0	1/1:19,0:20:9.98:147,10,0	1/1:10,2:12:0.47:1,0,0	0/0:14,1:17:30.88:0,31,207	0/0:16,0:16:20:0,20,162	0/0:29,0:30:78.37:0,78,543	1/1:28,0:29:6.52:128,7,0	0/1:9,3:12:1.18:127,0,1	1/1:24,0:23:12.61:139,13,0	1/1:5,0:4:11.24:54,11,0
chr10	77071200	.	A	AAAAAAAAG	11955.56	PASS	AB=0.700;AC=38;AF=0.679;AN=56;BaseQRankSum=3.397;DP=636;FS=1.811;HRun=0;HaplotypeScore=134.9471;InbreedingCoeff=0.6718;MQ=51.75;MQ0=17;MQRankSum=-9.033;QD=25.55;ReadPosRankSum=-1.294;VQSLOD=4.2655;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:29:53.36:408,0,53	1/1:0,0:11:17.98:461,18,0	0/1:30,0:7:4.40:4,0,146	0/0:28,0:7:3.22:0,3,52	1/1:6,0:33:27.09:775,27,0	1/1:5,0:6:6.02:183,6,0	1/1:3,2:20:27.55:749,28,0	1/1:17,0:30:56.87:757,57,0	0/0:17,0:17:48.05:0,48,950	1/1:9,0:21:12.92:303,13,0	1/1:5,0:23:17:598,17,0	0/0:36,0:36:93.20:0,93,1592	0/0:22,0:22:56.93:0,57,987	1/1:4,0:15:10.85:271,11,0	1/1:5,0:26:11.20:867,11,0	1/1:2,0:18:27.09:737,27,0	0/1:8,1:30:0.91:597,0,1	0/1:3,0:12:4.23:333,0,4	1/1:4,0:23:32.98:962,33,0	1/1:6,0:33:9.56:654,10,0	1/1:9,0:9:18.03:386,18,0	0/0:19,0:19:50.98:0,51,867	0/0:15,0:15:35.60:0,36,643	0/0:31,0:30:84.25:0,84,1801	1/1:5,1:30:13.40:969,13,0	1/1:6,0:18:22.69:655,23,0	1/1:9,0:30:38.75:973,39,0	1/1:1,0:12:12.04:313,12,0
chr10	77073896	.	AG	A	3754.08	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=10.562;DP=676;FS=8.742;HRun=1;HaplotypeScore=105.8619;InbreedingCoeff=0.6490;MQ=64.68;MQ0=3;MQRankSum=0.128;QD=7.28;ReadPosRankSum=3.590;VQSLOD=0.5321;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:9.30:9,0,29	1/1:22,0:22:35.14:187,35,0	0/0:29,0:10:6.87:0,7,80	0/1:19,0:9:5.83:20,0,6	1/1:43,0:43:66.12:388,66,0	1/1:19,0:19:37.26:199,37,0	1/1:28,0:28:25.64:193,26,0	1/1:38,0:37:15.25:225,15,0	0/0:25,0:25:26.42:0,26,382	1/1:40,0:39:27.05:207,27,0	1/1:32,1:33:46.29:371,46,0	0/0:23,0:23:26.90:0,27,482	0/0:17,0:16:24.82:0,25,307	0/1:26,0:26:15.56:150,0,16	1/1:20,1:21:36.91:182,37,0	1/1:21,0:21:4.61:165,5,0	1/1:30,1:31:51.38:226,51,0	1/1:19,1:20:23.37:187,23,0	0/1:21,0:20:6.16:109,0,6	1/1:32,0:31:42.85:270,43,0	1/1:8,0:8:7.10:74,7,0	0/0:25,0:25:22.81:0,23,496	0/0:26,0:26:43.61:0,44,514	0/0:15,0:14:40.50:0,41,308	1/1:19,0:19:9.63:105,10,0	1/1:12,0:12:9.19:72,9,0	1/1:20,0:19:30.96:193,31,0	1/1:21,0:21:40.22:223,40,0
chr10	77073897	.	GA	G	6475.54	PASS	AB=0.947;AC=37;AF=0.661;AN=56;BaseQRankSum=3.329;DP=673;FS=3.433;HRun=12;HaplotypeScore=98.3016;InbreedingCoeff=0.6140;MQ=64.68;MQ0=3;MQRankSum=-0.553;QD=12.62;ReadPosRankSum=1.655;VQSLOD=4.9731;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:23:29.93:246,30,0	1/1:21,1:22:50.04:361,50,0	0/0:29,0:11:4.72:0,5,99	0/1:19,0:9:9.58:10,0,22	1/1:41,3:44:27.88:556,28,0	1/1:18,1:19:46.21:311,46,0	1/1:26,3:29:61.49:451,61,0	0/1:32,2:33:2.67:272,0,3	0/0:25,0:25:24.36:0,24,428	1/1:36,4:40:77.86:595,78,0	1/1:33,0:33:11.11:367,11,0	0/0:24,0:24:57.04:0,57,572	0/0:17,0:16:16.18:0,16,301	1/1:25,1:26:39.03:354,39,0	1/1:21,0:21:44.32:305,44,0	0/1:17,3:21:12.41:239,0,12	1/1:27,3:30:57.57:409,58,0	1/1:19,0:19:44.17:315,44,0	0/1:19,1:19:3.77:200,0,4	1/1:30,2:31:65.12:458,65,0	0/1:8,0:8:23.45:88,0,23	0/0:23,0:23:49.67:0,50,496	0/0:26,0:27:41.35:0,41,553	0/0:14,0:13:36.07:0,36,370	1/1:17,2:19:5.46:185,5,0	1/1:11,1:12:32.87:262,33,0	1/1:20,1:20:36.69:216,37,0	1/1:20,1:21:26.86:278,27,0
chr10	77077026	.	GA	G	6026.74	PASS	AB=0.665;AC=36;AF=0.643;AN=56;BaseQRankSum=6.858;DP=655;FS=3.379;HRun=13;HaplotypeScore=75.4375;InbreedingCoeff=0.1361;MQ=77.64;MQ0=0;MQRankSum=0.707;QD=10.90;ReadPosRankSum=3.108;VQSLOD=4.8131;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,44:57:99:864,99,0	0/1:2,8:11:6.27:114,0,6	0/1:14,2:14:4.15:4,0,112	0/1:16,4:20:24.75:85,0,25	0/1:6,15:21:3.64:262,0,4	0/1:2,15:19:9.52:247,0,10	0/1:5,17:23:2.65:300,0,3	1/1:10,13:23:35.70:262,36,0	0/0:18,0:18:21.81:0,22,342	1/1:10,20:34:70.89:483,71,0	0/1:7,10:18:0.35:152,0,0	0/0:32,2:34:51.01:0,51,627	0/1:18,3:21:21.94:22,0,276	0/1:4,18:24:0.58:304,0,1	1/1:4,12:19:3.75:164,4,0	0/1:3,8:14:5.17:103,0,5	1/1:8,32:41:59.30:589,59,0	1/1:4,21:26:36.55:370,37,0	0/1:9,11:20:42.79:217,0,43	1/1:7,15:23:14.56:261,15,0	1/1:4,12:17:37.81:269,38,0	0/0:26,2:28:41.18:0,41,558	0/0:18,3:22:7.97:0,8,226	0/1:23,5:29:15.54:16,0,367	1/1:4,14:20:4.86:194,5,0	1/1:7,20:29:34.53:398,35,0	1/1:5,9:15:2.65:174,3,0	1/1:1,11:12:4.15:171,4,0
chr10	77077696	.	G	GT	24405.05	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-17.007;DP=784;FS=0.921;HRun=0;HaplotypeScore=70.4806;InbreedingCoeff=1.0000;MQ=83.78;MQ0=1;MQRankSum=-3.631;QD=44.13;ReadPosRankSum=0.259;VQSLOD=5.0590;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,55:53:99:2158,135,0	1/1:0,19:19:51.17:815,51,0	0/0:26,0:26:61.63:0,62,815	0/0:24,0:22:66.22:0,66,907	1/1:2,25:27:75.26:1199,75,0	1/1:0,21:21:60.20:959,60,0	1/1:2,29:31:87.30:1391,87,0	1/1:1,29:30:87.27:1346,87,0	0/0:28,0:28:81.27:0,81,1130	1/1:0,35:35:99:1622,102,0	1/1:0,14:14:39.13:623,39,0	0/0:35,0:35:99:0,102,1427	0/0:42,0:42:99:0,126,1759	1/1:2,35:37:93.32:1487,93,0	1/1:0,19:19:54.18:863,54,0	1/1:0,35:35:99:1679,105,0	1/1:0,38:38:99:1679,105,0	1/1:0,17:17:51.17:815,51,0	1/1:2,17:19:57.19:901,57,0	1/1:0,22:22:63.21:1007,63,0	1/1:0,43:43:99:1966,123,0	0/0:23,0:23:66.22:0,66,919	0/0:20,0:20:60.20:0,60,839	0/0:33,0:33:96.28:0,96,1320	1/1:0,26:26:66.23:1055,66,0	1/1:0,29:29:87.25:1355,87,0	1/1:3,15:17:45.15:717,45,0	1/1:0,18:18:48.16:767,48,0
chr10	77082164	.	G	GTA	4001.34	PASS	AB=0.663;AC=34;AF=0.654;AN=52;BaseQRankSum=-6.681;DP=243;FS=4.015;HRun=0;HaplotypeScore=29.3424;InbreedingCoeff=0.3486;MQ=76.81;MQ0=1;MQRankSum=-0.728;QD=20.73;ReadPosRankSum=0.921;VQSLOD=3.2303;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:33.02:0,33,339	1/1:1,0:1:3:25,3,0	0/1:12,0:5:0.01:0,0,0	0/0:15,0:9:2.97:0,3,20	1/1:2,4:6:6.02:98,6,0	0/1:4,11:15:3.65:272,0,4	1/1:1,2:3:3.01:49,3,0	1/1:18,20:37:23.18:722,23,0	0/0:5,0:5:15.05:0,15,184	1/1:2,1:3:6.02:97,6,0	1/1:1,4:6:12.03:173,12,0	./.	0/0:6,0:6:15.03:0,15,171	1/1:6,0:6:15.01:166,15,0	1/1:2,6:8:21.05:317,21,0	0/1:2,4:6:15.70:89,0,16	1/1:3,17:20:30.10:489,30,0	0/1:3,7:10:52.79:224,0,53	0/1:3,4:6:21.80:138,0,22	1/1:1,2:3:3.01:49,3,0	1/1:2,1:3:3.01:49,3,0	./.	0/0:2,0:2:3.01:0,3,37	0/0:7,0:7:9.01:0,9,98	1/1:1,6:8:15.05:245,15,0	1/1:2,9:12:27.09:429,27,0	1/1:4,7:11:9.03:147,9,0	0/1:4,11:15:30.15:224,0,30
chr10	77082474	.	A	AC	545.71	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.192;DP=571;FS=0.000;HRun=6;HaplotypeScore=57.2355;InbreedingCoeff=0.9887;MQ=83.17;MQ0=0;MQRankSum=-1.123;QD=21.83;ReadPosRankSum=1.082;VQSLOD=2.7467;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:51.16:641,51,0	0/0:9,0:9:24.05:0,24,245	0/0:26,0:26:54.59:0,55,615	0/0:22,0:22:51.47:0,51,510	0/0:15,0:15:45.08:0,45,451	0/0:16,0:16:42.09:0,42,428	0/0:28,0:28:66.11:0,66,665	0/0:17,0:17:45.10:0,45,459	0/0:14,0:14:39.07:0,39,390	0/0:16,0:16:42.09:0,42,425	0/0:11,0:11:33.05:0,33,323	0/0:22,0:22:60.13:0,60,612	0/0:19,0:19:48.09:0,48,482	0/0:30,0:30:81.16:0,81,818	0/0:26,0:26:75.16:0,75,758	0/0:25,0:25:66.11:0,66,659	0/0:36,0:36:99:0,102,1022	0/0:30,0:30:81.18:0,81,825	0/0:21,0:21:51.09:0,51,512	0/0:12,0:12:30.06:0,30,306	0/0:26,0:26:72.11:0,72,720	0/0:10,0:10:21.03:0,21,208	0/0:17,0:17:33.06:0,33,336	0/0:26,0:26:72.16:0,72,733	0/0:20,0:20:45.09:0,45,458	0/0:24,0:24:60.07:0,60,595	0/0:21,0:21:57.12:0,57,575	0/0:7,0:7:21.02:0,21,205
chr10	77087331	.	TAA	T	6302.90	PASS	AB=0.957;AC=41;AF=0.732;AN=56;BaseQRankSum=2.247;DP=523;FS=5.055;HRun=15;HaplotypeScore=74.1523;InbreedingCoeff=0.8873;MQ=75.03;MQ0=8;MQRankSum=-0.154;QD=15.92;ReadPosRankSum=5.506;VQSLOD=4.1800;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,15:21:32.63:320,33,0	1/1:2,7:9:17.90:150,18,0	0/0:43,0:19:23.92:0,24,213	0/1:21,1:11:19.17:19,0,66	1/1:2,17:21:36.91:369,37,0	1/1:2,15:18:41.72:355,42,0	1/1:3,11:15:29.90:261,30,0	1/1:13,18:31:38.49:435,38,0	0/0:7,0:9:26.04:0,26,273	1/1:5,14:20:47.42:391,47,0	1/1:2,12:15:20.73:229,21,0	0/0:17,0:19:47.56:0,48,537	0/0:13,1:15:8.72:0,9,335	1/1:2,9:11:17.95:159,18,0	1/1:7,8:15:17.89:157,18,0	1/1:3,7:11:20.43:170,20,0	1/1:4,19:23:38.93:343,39,0	1/1:4,29:33:77.79:685,78,0	1/1:8,16:24:47.50:420,48,0	1/1:8,11:22:39.94:310,40,0	1/1:2,5:7:14.96:132,15,0	0/0:9,0:11:20.52:0,21,209	0/0:13,0:14:29.57:0,30,346	0/0:15,0:15:45.08:0,45,545	1/1:2,17:18:38.94:344,39,0	1/1:10,14:24:38.75:342,39,0	1/1:4,25:29:62.42:553,62,0	1/1:0,6:6:18:159,18,0
chr10	77091217	.	GA	G	4855.74	PASS	AB=0.917;AC=37;AF=0.661;AN=56;BaseQRankSum=9.748;DP=683;FS=5.598;HRun=8;HaplotypeScore=99.4079;InbreedingCoeff=0.8845;MQ=67.10;MQ0=28;MQRankSum=-1.837;QD=13.12;ReadPosRankSum=0.275;VQSLOD=4.4909;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:47:99:0,132,1517	1/1:8,0:8:12.47:68,12,0	0/0:80,0:16:5:0,5,132	0/0:74,0:17:25.26:0,25,248	1/1:33,1:34:72.67:413,73,0	1/1:23,0:23:29.91:224,30,0	1/1:21,1:22:34.65:255,35,0	0/1:10,1:10:7.90:47,0,8	0/0:14,0:14:36.57:0,37,426	1/1:14,0:14:30.42:256,30,0	1/1:10,1:11:24.06:156,24,0	0/0:15,0:14:33.09:0,33,388	0/0:19,0:19:51.14:0,51,593	1/1:8,0:8:17.84:106,18,0	1/1:18,0:18:38.30:228,38,0	1/1:21,1:22:53.49:341,53,0	1/1:32,1:33:86.04:514,86,0	1/1:31,0:31:73.15:485,73,0	1/1:17,0:17:13.92:214,14,0	1/1:18,2:20:5.90:200,6,0	1/1:18,0:18:22.28:187,22,0	0/0:22,0:22:42.12:0,42,497	0/0:18,0:18:39.08:0,39,435	0/0:24,0:24:66.17:0,66,771	1/1:26,0:26:47.88:369,48,0	1/1:27,0:27:57.60:390,58,0	1/1:19,1:20:51.16:304,51,0	1/1:7,0:7:17.13:99,17,0
chr10	77091225	.	AG	A	4013.21	PASS	AB=0.986;AC=39;AF=0.696;AN=56;BaseQRankSum=12.279;DP=637;FS=4.119;HRun=1;HaplotypeScore=103.9448;InbreedingCoeff=0.8864;MQ=69.91;MQ0=21;MQRankSum=-3.108;QD=9.35;ReadPosRankSum=-0.650;VQSLOD=1.0729;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,128,1347	1/1:6,0:6:12.58:67,13,0	0/1:70,1:18:5.22:5,0,49	0/0:65,0:18:16.91:0,17,195	1/1:35,0:35:75.28:413,75,0	1/1:18,0:18:42.88:204,43,0	1/1:20,0:20:51.44:245,51,0	1/1:10,0:9:17.10:76,17,0	0/0:14,0:14:32.04:0,32,416	1/1:15,0:15:29.30:179,29,0	1/1:13,0:13:16.83:121,17,0	0/0:12,0:11:33.08:0,33,370	0/0:19,0:19:57.11:0,57,621	1/1:8,0:8:20.34:92,20,0	1/1:20,0:20:20.66:192,21,0	1/1:22,0:22:41.81:232,42,0	1/1:34,0:34:89.95:416,90,0	1/1:30,0:30:71.23:343,71,0	1/1:13,0:13:33.39:185,33,0	1/1:17,0:17:27.07:151,27,0	1/1:16,0:16:38.57:191,39,0	0/0:16,1:17:41.92:0,42,526	0/0:14,0:14:37.43:0,37,420	0/0:23,0:23:69.13:0,69,753	1/1:22,0:22:51.45:249,51,0	1/1:23,2:25:59.08:331,59,0	1/1:23,1:24:50.17:255,50,0	1/1:10,0:10:0.41:65,0,0
chr10	77091226	.	G	GA	6490.18	PASS	AB=0.993;AC=38;AF=0.679;AN=56;BaseQRankSum=9.212;DP=640;FS=1.636;HRun=9;HaplotypeScore=98.3379;InbreedingCoeff=0.8453;MQ=69.82;MQ0=21;MQRankSum=-1.615;QD=14.99;ReadPosRankSum=-2.243;VQSLOD=4.5820;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,102,861	1/1:7,0:7:17.49:123,17,0	0/1:68,0:18:38.50:39,0,46	0/0:61,1:18:16.17:0,16,153	1/1:34,1:35:93.42:702,93,0	1/1:18,0:18:38.15:305,38,0	1/1:20,0:20:31.31:365,31,0	1/1:10,0:9:17.65:147,18,0	0/0:14,0:14:36.46:0,36,313	1/1:16,0:16:27:257,27,0	1/1:12,1:13:29.10:233,29,0	0/0:12,0:11:29.99:0,30,260	0/0:19,0:19:50.98:0,51,442	1/1:9,0:9:19.86:138,20,0	1/1:19,1:20:30.51:403,31,0	1/1:22,0:22:50.93:376,51,0	1/1:35,0:35:65.90:620,66,0	1/1:29,0:29:65.63:512,66,0	1/1:13,0:13:28.62:257,29,0	1/1:18,1:19:7.12:255,7,0	1/1:16,0:16:41.22:321,41,0	0/0:17,0:17:17.78:0,18,383	0/0:13,0:14:34.51:0,35,275	0/0:23,0:23:62.98:0,63,546	1/1:21,0:21:41.57:338,42,0	1/1:25,1:26:62.70:524,63,0	1/1:23,1:24:36.64:434,37,0	0/1:10,0:10:2.16:142,0,2
chr10	77100071	.	C	CT	11964.87	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-0.255;DP=650;FS=7.124;HRun=8;HaplotypeScore=86.8880;InbreedingCoeff=0.9968;MQ=71.46;MQ0=0;MQRankSum=-5.826;QD=29.54;ReadPosRankSum=-1.756;VQSLOD=3.9074;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,1:46:91.48:0,91,1091	1/1:3,9:12:30.09:346,30,0	0/0:17,0:17:26.22:0,26,226	0/0:14,0:13:23.90:0,24,201	1/1:8,20:27:75.17:831,75,0	1/1:6,26:32:65.96:1000,66,0	1/1:5,9:13:36.11:415,36,0	1/1:18,15:33:75.20:841,75,0	0/0:21,0:21:57.03:0,57,521	1/1:4,23:27:72.21:828,72,0	1/1:5,14:19:45.13:519,45,0	0/0:22,0:22:60:0,60,539	0/0:43,0:43:99:0,116,1044	1/1:4,14:18:45.13:514,45,0	1/1:3,26:29:87.25:988,87,0	1/1:3,17:20:54.16:623,54,0	1/1:2,20:22:66.18:750,66,0	1/1:8,15:23:51.15:587,51,0	1/1:9,7:16:42.12:475,42,0	1/1:4,15:19:45.13:519,45,0	1/1:5,9:14:33.10:379,33,0	0/0:27,0:27:78.04:0,78,712	0/0:19,0:19:51.02:0,51,467	0/0:36,0:36:99:0,99,906	1/1:7,19:26:69.18:775,69,0	1/1:5,20:25:66.20:761,66,0	1/1:9,13:22:42.97:640,43,0	1/1:1,5:6:15.04:173,15,0
chr10	77100114	.	A	AT	13684.30	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-2.296;DP=610;FS=2.508;HRun=7;HaplotypeScore=77.7002;InbreedingCoeff=0.9648;MQ=72.29;MQ0=0;MQRankSum=-5.593;QD=30.82;ReadPosRankSum=-1.040;VQSLOD=4.6855;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,43:48:99:1413,117,0	1/1:2,8:10:24.07:290,24,0	0/0:11,0:11:6.11:0,6,159	0/0:13,0:13:34.67:0,35,299	1/1:2,30:32:87.22:1034,87,0	1/1:3,24:27:63.19:760,63,0	1/1:0,16:16:39.12:471,39,0	1/1:7,32:39:96.28:1146,96,0	0/0:21,0:21:63.10:0,63,608	1/1:3,17:20:54.16:642,54,0	1/1:5,16:21:54.11:624,54,0	0/0:19,0:19:48.08:0,48,464	0/0:28,0:28:75.12:0,75,724	1/1:1,20:21:57.17:688,57,0	1/1:2,22:24:66.20:788,66,0	1/1:2,18:20:54.17:652,54,0	1/1:6,17:23:48.15:580,48,0	1/1:3,20:23:57.17:687,57,0	1/1:2,11:13:33.09:388,33,0	1/1:3,16:19:48.07:548,48,0	1/1:1,13:14:39.12:471,39,0	0/0:22,0:22:60.09:0,60,579	0/0:12,0:12:33.05:0,33,319	0/0:40,0:40:99:0,111,1066	1/1:0,25:25:72.22:869,72,0	1/1:1,25:27:81.11:947,81,0	1/1:3,16:19:51.16:614,51,0	1/1:1,2:3:6.02:72,6,0
chr10	77101143	.	G	GGACC	3788.07	PASS	AB=0.700;AC=28;AF=0.609;AN=46;BaseQRankSum=10.524;DP=189;FS=5.633;HRun=0;HaplotypeScore=146.2707;InbreedingCoeff=0.7036;MQ=46.14;MQ0=13;MQRankSum=-7.407;QD=44.57;ReadPosRankSum=5.592;VQSLOD=4.1064;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.17:0,81,1568	1/1:3,1:3:9.03:179,9,0	0/0:1,0:1:2.88:0,3,15	./.	./.	1/1:0,5:5:15.05:275,15,0	1/1:1,0:1:2.99:24,3,0	./.	0/0:6,0:6:12.04:0,12,251	1/1:1,8:8:24.08:532,24,0	1/1:0,5:5:15.05:258,15,0	0/0:13,0:13:39.13:0,39,757	0/0:14,0:14:39.09:0,39,752	1/1:0,7:7:21.07:348,21,0	1/1:0,4:4:12.04:212,12,0	0/1:2,4:5:47.79:197,0,48	1/1:2,1:3:5.98:73,6,0	0/1:3,1:4:50.90:91,0,51	./.	1/1:1,6:7:21.06:311,21,0	1/1:3,4:6:18.02:243,18,0	0/0:13,0:13:36.12:0,36,745	0/0:10,0:10:27.09:0,27,543	0/0:14,0:13:27.07:0,27,498	./.	1/1:0,3:4:12.04:214,12,0	1/1:3,6:8:24.08:474,24,0	1/1:4,6:6:18.06:356,18,0
chr10	77101154	.	A	AT	1086.34	PASS	AB=0.800;AC=28;AF=0.609;AN=46;BaseQRankSum=10.166;DP=184;FS=15.764;HRun=0;HaplotypeScore=146.0615;InbreedingCoeff=0.7217;MQ=53.93;MQ0=13;MQRankSum=-6.449;QD=13.93;ReadPosRankSum=9.053;VQSLOD=2.9076;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:71.41:0,71,968	1/1:1,1:1:2.96:19,3,0	0/1:5,0:3:0.79:1,0,8	0/0:3,0:3:5.60:0,6,43	./.	1/1:0,5:5:14.89:106,15,0	./.	./.	0/0:10,0:10:18.06:0,18,246	1/1:1,8:8:24:219,24,0	1/1:0,5:5:14.80:98,15,0	0/0:11,0:11:30.10:0,30,414	0/0:11,0:11:27.09:0,27,376	1/1:1,6:7:19.94:123,20,0	1/1:0,4:4:11.85:79,12,0	0/1:2,4:5:26.98:66,0,27	1/1:0,1:1:2.97:20,3,0	1/1:0,1:1:2.98:21,3,0	./.	1/1:0,6:6:15.58:95,16,0	1/1:2,4:4:8.82:60,9,0	0/0:13,0:13:30.09:0,30,402	0/0:13,0:13:30.10:0,30,417	0/0:14,0:13:18.06:0,18,250	./.	1/1:0,4:4:11.93:91,12,0	1/1:1,6:6:17.88:131,18,0	1/1:4,6:6:17.92:136,18,0
chr10	77101157	.	TCAAAAAAAAAAAAAAA	T	8328.04	PASS	AB=0.800;AC=28;AF=0.609;AN=46;BaseQRankSum=11.243;DP=218;FS=4.462;HRun=0;HaplotypeScore=190.2109;InbreedingCoeff=0.7099;MQ=53.69;MQ0=13;MQRankSum=-8.240;QD=106.77;ReadPosRankSum=10.275;VQSLOD=3.6417;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:39:99:0,115,5986	1/1:1,1:1:3.01:135,3,0	0/0:6,0:4:12.04:0,12,441	0/1:4,0:3:9.43:9,0,54	./.	1/1:0,5:5:15.05:678,15,0	./.	./.	0/0:16,0:16:36.12:0,36,2153	1/1:1,9:9:27.09:1150,27,0	1/1:0,5:5:15.05:674,15,0	0/0:17,0:17:48.13:0,48,2490	0/0:13,0:13:39.11:0,39,1960	1/1:0,7:7:21.07:941,21,0	1/1:0,4:4:12.04:542,12,0	0/1:2,4:5:99:530,0,195	1/1:0,1:1:3.01:136,3,0	1/1:0,1:1:3.01:137,3,0	./.	1/1:0,6:6:18.06:791,18,0	1/1:2,4:4:12.04:423,12,0	0/0:10,0:10:26.73:0,27,802	0/0:17,0:17:51.18:0,51,2643	0/0:19,0:18:40.43:0,40,1707	./.	1/1:0,4:4:12.04:542,12,0	1/1:1,6:6:18.06:819,18,0	1/1:4,6:6:18.06:821,18,0
chr10	77102917	.	CAG	C	1245.46	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.193;DP=714;FS=12.908;HRun=0;HaplotypeScore=84.9376;InbreedingCoeff=0.9913;MQ=90.45;MQ0=0;MQRankSum=-0.713;QD=27.08;ReadPosRankSum=-0.690;VQSLOD=3.5783;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,135,2321	0/0:9,0:9:27.08:0,27,451	0/0:27,0:27:69.16:0,69,1061	0/0:32,0:32:78.21:0,78,1274	1/1:2,20:22:54.11:708,54,0	0/0:27,0:27:81.26:0,81,1409	0/0:18,0:18:39.13:0,39,692	0/0:24,0:24:54.16:0,54,883	0/0:28,0:28:81.28:0,81,1430	0/0:24,0:24:72.25:0,72,1276	0/0:19,0:19:54.17:0,54,928	0/0:34,0:34:99:0,99,1722	0/0:24,0:24:66.21:0,66,1130	0/0:20,0:20:57.20:0,57,1010	0/0:21,0:21:63.20:0,63,1084	0/0:34,0:34:96.27:0,96,1577	0/0:27,0:27:65.83:0,66,1132	0/0:23,0:23:69.21:0,69,1181	0/0:21,0:21:54.18:0,54,954	0/0:32,0:32:93.29:0,93,1593	0/0:33,0:33:90.26:0,90,1495	0/0:22,0:22:63.22:0,63,1109	0/0:19,0:19:54.18:0,54,937	0/0:32,0:32:87.28:0,87,1505	1/1:3,21:24:48.16:659,48,0	0/0:35,0:35:99:0,105,1801	0/0:28,0:28:78.27:0,78,1366	0/0:5,0:5:15.05:0,15,259
chr10	77105442	.	A	AACACACACACACACAC	9854.70	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=0.793;DP=648;FS=0.546;HRun=0;HaplotypeScore=283.7734;InbreedingCoeff=0.7473;MQ=58.74;MQ0=7;MQRankSum=-7.814;QD=22.97;ReadPosRankSum=-4.447;VQSLOD=2.7508;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:33:12.31:199,12,0	1/1:11,0:11:0.33:163,0,0	0/0:37,0:27:2.12:0,2,121	0/0:27,0:17:5.03:0,5,30	1/1:15,1:19:6.02:394,6,0	1/1:21,3:25:15.05:809,15,0	1/1:25,0:25:15.48:267,15,0	1/1:26,0:26:27.55:974,28,0	0/0:22,0:22:31.01:0,31,1035	1/1:24,0:23:42.75:1039,43,0	1/1:21,0:24:6.02:234,6,0	0/0:26,0:26:45.11:0,45,1378	0/0:29,0:33:64.99:0,65,1886	1/1:11,0:14:12.03:516,12,0	1/1:24,2:29:6.02:441,6,0	1/1:22,0:21:9.01:234,9,0	1/1:18,0:22:16.12:982,16,0	1/1:14,0:18:7.26:276,7,0	1/1:10,0:7:3.01:46,3,0	1/1:19,0:19:5.48:168,5,0	1/1:20,0:19:6.49:199,6,0	0/0:17,0:17:22.01:0,22,676	0/0:24,0:24:28.62:0,29,618	0/0:25,0:33:16.41:0,16,1861	1/1:14,0:14:11.33:320,11,0	1/1:23,0:22:28.27:1006,28,0	1/1:42,0:41:33.53:1050,34,0	1/1:7,0:7:12.04:538,12,0
chr10	77105785	.	C	CG	2273.81	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.584;DP=617;FS=7.507;HRun=1;HaplotypeScore=60.6498;InbreedingCoeff=0.9969;MQ=91.70;MQ0=0;MQRankSum=-3.759;QD=35.53;ReadPosRankSum=0.176;VQSLOD=3.1790;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:66.22:987,66,0	0/0:7,0:7:21.07:0,21,273	0/0:25,0:25:63.13:0,63,788	0/0:28,0:28:78.21:0,78,979	1/1:0,22:22:51.17:763,51,0	0/0:25,0:25:75.23:0,75,955	0/0:32,0:32:96.30:0,96,1230	0/0:24,0:24:69.21:0,69,870	0/0:27,0:27:81.25:0,81,1038	0/0:16,0:16:42.14:0,42,545	0/0:13,0:13:33.09:0,33,412	0/0:26,0:26:78.25:0,78,1012	0/0:18,0:18:54.16:0,54,683	0/0:30,0:30:90.29:0,90,1168	0/0:36,0:36:99:0,108,1401	0/0:29,0:29:84.25:0,84,1071	0/0:26,0:26:75.23:0,75,959	0/0:20,0:19:57.18:0,57,738	0/0:17,0:17:48.14:0,48,609	0/0:13,0:13:36.10:0,36,452	0/0:23,0:23:66.20:0,66,842	0/0:20,0:20:57.17:0,57,725	0/0:8,0:8:21.07:0,21,272	0/0:32,0:32:93.30:0,93,1206	1/1:1,17:18:45.15:666,45,0	0/0:17,0:17:51.17:0,51,662	0/0:30,0:30:87.27:0,87,1113	0/0:11,0:11:33.11:0,33,428
chr10	77106257	.	TCACACACACACACACACACA	T	10483.12	PASS	AC=32;AF=0.615;AN=52;BaseQRankSum=10.938;DP=680;FS=5.270;HRun=0;HaplotypeScore=321.3995;InbreedingCoeff=0.8345;MQ=50.08;MQ0=19;MQRankSum=-4.468;QD=26.67;ReadPosRankSum=-0.601;VQSLOD=2.2967;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:30:13.39:0,13,306	1/1:3,8:11:9.02:240,9,0	./.	./.	0/0:13,0:24:15.03:0,15,429	1/1:6,16:22:12.04:645,12,0	1/1:7,18:25:6.02:189,6,0	1/1:19,24:43:41.35:913,41,0	0/0:13,0:13:21.07:0,21,1735	1/1:13,12:24:35.92:932,36,0	1/1:8,12:20:3.01:161,3,0	0/0:29,0:29:57.18:0,57,4222	0/0:24,0:23:65.80:0,66,4478	1/1:9,12:20:9.03:484,9,0	1/1:9,18:28:36.12:1801,36,0	1/1:1,13:14:9.03:484,9,0	1/1:15,14:28:5.98:181,6,0	1/1:7,12:18:6.01:199,6,0	1/1:16,15:31:32.45:1032,32,0	1/1:9,24:33:7.52:481,8,0	0/0:22,13:32:0.47:0,0,1	0/0:16,0:17:42.14:0,42,2220	0/0:21,0:20:39.12:0,39,2714	0/0:32,0:38:81.55:0,82,6351	0/0:8,0:31:30.10:0,30,946	1/1:19,24:42:63.03:1608,63,0	1/1:7,16:23:8.25:328,8,0	1/1:0,5:5:15.05:806,15,0
chr10	77107490	.	AT	A	17430.14	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=18.125;DP=777;FS=1.878;HRun=1;HaplotypeScore=90.7579;InbreedingCoeff=0.9976;MQ=85.48;MQ0=0;MQRankSum=-3.519;QD=38.56;ReadPosRankSum=1.610;VQSLOD=5.3754;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,162,2462	1/1:0,10:10:27.09:374,27,0	0/0:33,0:33:92.87:0,93,1410	0/0:16,0:16:40.69:0,41,623	0/0:40,0:40:99:0,120,1866	1/1:0,20:20:54.18:751,54,0	1/1:0,19:19:48.16:671,48,0	1/1:0,42:42:99:1717,123,0	0/0:27,0:27:81.28:0,81,1290	1/1:1,33:34:99:1358,99,0	1/1:0,16:16:42.14:587,42,0	0/0:31,0:31:93.30:0,93,1457	0/0:39,0:39:99:0,117,1817	1/1:0,32:32:90.30:1258,90,0	1/1:0,25:25:69.23:965,69,0	1/1:0,35:35:99:1468,105,0	1/1:0,36:36:87.29:1216,87,0	1/1:0,19:19:51.17:710,51,0	1/1:0,17:17:51.17:712,51,0	1/1:0,20:20:57.15:771,57,0	1/1:0,45:45:99:1636,117,0	0/0:28,0:28:81.26:0,81,1264	0/0:22,0:22:66.16:0,66,981	0/0:19,0:19:54.18:0,54,863	0/0:16,0:16:48.16:0,48,767	1/1:1,48:49:99:2019,147,0	1/1:1,27:28:72.24:1006,72,0	1/1:0,5:5:15.05:210,15,0
chr10	77108685	.	A	AGTGT	2709.81	PASS	AB=1.000;AC=35;AF=0.729;AN=48;BaseQRankSum=-1.651;DP=654;FS=2.227;HRun=0;HaplotypeScore=135.5688;InbreedingCoeff=0.5764;MQ=69.77;MQ0=12;MQRankSum=0.403;QD=6.26;ReadPosRankSum=-0.575;VQSLOD=2.5767;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:6.02:114,6,0	1/1:5,2:7:3.01:70,3,0	./.	./.	0/1:17,0:19:0:0,0,0	1/1:22,0:22:10.57:135,11,0	1/1:34,0:33:14.64:206,15,0	1/1:15,0:15:1.82:5,2,0	0/0:25,0:25:8.74:0,9,116	1/1:23,0:23:17.75:213,18,0	./.	./.	0/0:21,0:21:11.95:0,12,95	1/1:20,0:20:6:88,6,0	1/1:24,1:26:18.09:305,18,0	1/1:13,7:22:3.01:70,3,0	1/1:35,0:35:19.27:309,19,0	0/1:25,0:24:3.79:282,0,4	1/1:18,0:18:10.25:148,10,0	1/1:24,0:23:9:116,9,0	1/1:42,0:42:27.46:371,27,0	0/0:23,0:23:0.46:0,0,1	0/1:15,0:14:0:0,0,0	0/0:32,0:32:16.73:0,17,186	0/0:20,0:22:10.50:0,11,71	1/1:25,0:24:18.01:238,18,0	1/1:20,0:19:9.01:130,9,0	1/1:8,0:10:3.01:52,3,0
chr10	77108710	.	G	GTGTGTA	537.31	PASS	AB=0.971;AC=15;AF=0.268;AN=56;BaseQRankSum=6.947;DP=615;FS=0.705;HRun=0;HaplotypeScore=129.3083;InbreedingCoeff=-0.3325;MQ=49.86;MQ0=23;MQRankSum=3.716;QD=1.54;ReadPosRankSum=8.148;VQSLOD=1.6040;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,33:49:57.37:129,0,57	0/1:11,0:11:6.09:6,0,97	0/0:18,0:11:23.28:0,23,188	0/0:15,0:5:2.98:0,3,22	0/0:14,0:14:14.50:0,14,120	0/1:24,0:23:41.23:41,0,186	0/0:35,0:34:32.43:0,32,418	0/0:17,0:16:47.02:0,47,328	0/0:31,0:31:59.81:0,60,583	0/1:17,0:17:17.20:17,0,198	0/0:6,0:5:2.99:0,3,24	0/0:15,0:15:34.72:0,35,266	0/0:18,0:18:41.87:0,42,412	0/1:19,0:18:11.62:12,0,158	0/1:22,0:22:99:111,0,127	0/1:27,0:27:2.30:2,0,124	0/1:36,0:35:71.51:72,0,360	0/1:20,0:18:99:104,0,148	0/1:8,0:8:10.30:10,0,95	0/1:20,0:19:33.53:34,0,77	0/1:35,0:34:76.80:77,0,238	0/0:24,0:23:44.15:0,44,351	0/0:14,0:13:29.94:0,30,242	0/0:37,0:36:53.24:0,53,614	0/0:23,0:22:47.64:0,48,440	0/1:24,0:21:0.35:0,0,338	0/1:23,0:21:0.17:0,0,223	0/1:13,0:10:55.89:65,0,56
chr10	77108979	.	A	AACAGACAG	22231.69	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-1.894;DP=997;FS=9.274;HRun=0;HaplotypeScore=273.8485;InbreedingCoeff=0.9633;MQ=54.07;MQ0=10;MQRankSum=-13.953;QD=42.92;ReadPosRankSum=-3.021;VQSLOD=2.5646;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:82,0:82:99:0,150,3321	1/1:6,5:11:12.04:457,12,0	0/0:45,0:36:39.02:0,39,712	0/0:56,0:37:11.10:0,11,832	0/0:33,0:33:63.17:0,63,1392	1/1:9,15:27:33.11:1244,33,0	1/1:21,8:34:48.15:1488,48,0	1/1:36,0:41:45.12:1014,45,0	0/0:33,0:33:45.15:0,45,1047	1/1:29,6:42:60.13:1995,60,0	1/1:14,7:23:8.86:332,9,0	0/0:45,0:45:92.99:0,93,2098	0/0:30,0:31:60.21:0,60,1482	1/1:25,15:44:69.21:2181,69,0	1/1:20,20:49:84.26:3009,84,0	1/1:15,21:41:78.25:2770,78,0	1/1:21,9:33:42.09:1404,42,0	1/1:9,8:20:15.05:623,15,0	1/1:17,5:20:21.06:746,21,0	1/1:13,12:29:36.12:1270,36,0	1/1:30,6:41:21.02:436,21,0	0/0:38,0:38:72.25:0,72,1786	0/0:37,0:37:54.17:0,54,1245	0/0:57,0:57:99:0,123,2800	0/0:21,0:22:45.11:0,45,1029	1/1:19,3:23:33.06:971,33,0	1/1:20,8:33:57.11:2082,57,0	1/1:0,1:2:6.02:210,6,0
chr10	77109014	.	AACAG	A	9702.57	PASS	AB=0.612;AC=33;AF=0.589;AN=56;BaseQRankSum=12.368;DP=870;FS=3.336;HRun=0;HaplotypeScore=225.1531;InbreedingCoeff=0.9164;MQ=50.69;MQ0=25;MQRankSum=-2.889;QD=22.20;ReadPosRankSum=-0.973;VQSLOD=4.1643;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:71,0:72:99:0,141,3149	1/1:2,5:7:12.04:201,12,0	0/0:54,0:24:37.41:0,37,824	0/0:53,0:30:55.90:0,56,1134	0/0:24,0:24:48.14:0,48,1089	1/1:10,11:20:20.98:292,21,0	1/1:8,22:30:24.09:641,24,0	1/1:13,25:38:28.51:1076,29,0	0/0:21,0:21:57.18:0,57,1363	1/1:8,18:25:54.15:835,54,0	1/1:5,4:9:3.01:50,3,0	0/0:42,0:42:99:0,105,2530	0/0:30,0:30:72.20:0,72,1653	1/1:7,25:32:45.11:725,45,0	1/1:15,29:44:44.71:634,45,0	1/1:10,39:49:16.01:1297,16,0	0/1:8,19:30:1.72:599,0,2	1/1:7,5:12:18.06:302,18,0	1/1:11,13:17:33.10:527,33,0	1/1:12,8:19:12.04:201,12,0	1/1:11,26:43:28.72:680,29,0	0/0:28,0:27:57.18:0,57,1338	0/0:26,0:26:54.19:0,54,1321	0/0:57,0:57:99:0,138,3272	0/0:24,0:24:42.14:0,42,965	1/1:4,13:17:39.13:635,39,0	1/1:9,19:28:45.15:755,45,0	1/1:0,5:5:15.05:252,15,0
chr10	77109045	.	AACAG	A	1885.77	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.236;DP=836;FS=48.240;HRun=0;HaplotypeScore=203.5318;InbreedingCoeff=0.9789;MQ=56.86;MQ0=9;MQRankSum=0.627;QD=28.57;ReadPosRankSum=2.924;VQSLOD=1.6294;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,56:66:68.10:1981,68,0	0/0:9,0:9:18.06:0,18,449	0/0:38,0:26:51.18:0,51,1256	0/0:37,0:25:42.14:0,42,957	0/0:14,0:13:33.10:0,33,706	0/0:14,0:13:30.10:0,30,743	0/0:34,0:33:75.20:0,75,1653	0/0:43,0:42:77.61:0,78,1770	0/0:23,0:23:60.21:0,60,1473	0/0:42,0:42:99:0,108,2678	0/0:7,0:7:18.06:0,18,439	0/0:46,0:46:99:0,126,3089	0/0:33,0:33:84.29:0,84,2070	0/0:35,0:35:78.27:0,78,1936	0/0:36,0:36:81.28:0,81,2010	0/0:46,0:46:99:0,108,2680	0/0:29,0:29:57.20:0,57,1415	0/0:11,0:11:30.10:0,30,694	0/0:20,0:17:39.13:0,39,960	0/0:12,0:12:24.08:0,24,588	0/0:63,0:62:99:0,121,2903	0/0:23,0:23:63.22:0,63,1542	0/0:17,0:17:36.12:0,36,899	0/0:50,0:49:99:0,121,2973	0/0:25,1:26:43.25:0,43,1393	0/0:22,0:21:51.17:0,51,1218	0/0:31,0:31:78.27:0,78,1918	0/0:9,0:9:24.08:0,24,599
chr10	77110148	.	TGGGG	T	8154.84	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-0.738;DP=555;FS=37.134;HRun=14;HaplotypeScore=105.4954;InbreedingCoeff=0.8766;MQ=66.53;MQ0=5;MQRankSum=-1.266;QD=21.52;ReadPosRankSum=8.677;VQSLOD=0.3726;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,1:35:55.65:551,56,0	1/1:4,3:7:5.94:84,6,0	0/0:33,0:20:30.57:0,31,464	0/0:18,0:12:18.05:0,18,254	0/0:14,0:15:6:0,6,56	1/1:8,9:17:36.06:487,36,0	1/1:11,16:27:51.05:721,51,0	1/1:8,4:12:8.93:127,9,0	0/0:16,0:17:14.90:0,15,166	1/1:16,7:23:26.97:373,27,0	1/1:7,3:12:17.98:215,18,0	0/0:18,0:19:7.23:0,7,124	0/0:10,0:11:5.92:0,6,41	1/1:20,4:24:30.51:415,31,0	1/1:15,12:27:48.10:658,48,0	1/1:13,9:21:39.05:550,39,0	1/1:15,19:36:81.20:1099,81,0	1/1:17,12:29:54.15:750,54,0	1/1:13,0:15:11.88:127,12,0	1/1:8,6:14:27.05:375,27,0	1/1:21,15:37:17.09:508,17,0	0/0:10,0:10:6.02:0,6,94	0/0:17,0:17:6.02:0,6,65	0/0:20,0:20:17.66:0,18,281	0/0:16,0:16:12.01:0,12,136	1/1:12,6:19:33.05:435,33,0	1/1:7,11:17:35.72:508,36,0	1/1:0,4:4:12.04:170,12,0
chr10	77113410	.	GA	G	3825.15	PASS	AB=0.726;AC=36;AF=0.720;AN=50;BaseQRankSum=1.768;DP=426;FS=15.281;HRun=8;HaplotypeScore=74.8085;InbreedingCoeff=0.7117;MQ=42.44;MQ0=25;MQRankSum=-5.614;QD=13.06;ReadPosRankSum=4.459;VQSLOD=1.7113;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:16:28.86:266,29,0	./.	./.	./.	1/1:4,6:9:6:58,6,0	1/1:10,13:23:44.62:427,45,0	1/1:9,7:15:14.86:144,15,0	1/1:3,8:10:24.03:229,24,0	0/0:22,0:21:51.05:0,51,565	1/1:7,13:18:39.04:369,39,0	1/1:9,8:17:14.26:258,14,0	0/0:30,0:29:55.91:0,56,586	0/0:18,0:18:47.96:0,48,493	0/1:9,5:13:12.31:123,0,12	1/1:6,11:16:10.60:239,11,0	1/1:9,13:21:1.50:308,1,0	1/1:13,4:14:17.88:168,18,0	1/1:15,6:20:4.55:180,5,0	1/1:3,5:8:15.02:144,15,0	1/1:11,10:19:20.13:241,20,0	1/1:3,4:6:5.74:58,6,0	0/0:18,0:17:21.05:0,21,244	0/0:15,0:11:24.06:0,24,279	0/0:26,1:27:19.04:0,19,466	1/1:6,8:14:14.47:144,14,0	1/1:5,9:14:29.93:270,30,0	0/1:6,4:9:3.01:92,0,3	1/1:12,1:6:11.99:107,12,0
chr10	77114380	.	T	TA	2190.64	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.515;DP=583;FS=0.955;HRun=9;HaplotypeScore=57.4089;InbreedingCoeff=0.9428;MQ=81.40;MQ0=0;MQRankSum=-1.563;QD=22.58;ReadPosRankSum=0.273;VQSLOD=4.3885;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,43:51:99:1210,111,0	0/0:4,0:4:8.98:0,9,74	0/0:13,0:12:7.04:0,7,106	0/0:19,0:21:14.39:0,14,176	1/1:5,27:32:52.60:791,53,0	0/0:22,0:22:56.93:0,57,486	0/0:21,0:21:47.94:0,48,409	0/0:33,0:33:71.93:0,72,618	0/0:21,0:21:50.98:0,51,443	0/0:22,0:22:44.98:0,45,391	0/0:20,0:20:41.98:0,42,364	0/0:23,0:23:65.96:0,66,570	0/0:16,0:17:46.99:0,47,388	0/0:20,0:20:53.97:0,54,465	0/0:19,0:19:53.96:0,54,465	0/0:20,0:21:62.03:0,62,527	0/0:34,0:34:86.75:0,87,737	0/0:18,0:18:35.95:0,36,306	0/0:26,0:26:65.58:0,66,556	0/0:16,0:16:44.99:0,45,391	0/0:19,0:19:53.97:0,54,465	0/0:16,0:16:41.97:0,42,361	0/0:13,1:14:26.11:0,26,233	0/0:13,0:13:35.96:0,36,308	1/1:1,13:14:30.08:332,30,0	0/0:15,0:15:38.98:0,39,339	0/0:23,0:23:64.97:0,65,542	0/0:14,0:14:23.97:0,24,208
chr10	77121389	.	GGA	G	672.39	PASS	AB=0.838;AC=11;AF=0.196;AN=56;BaseQRankSum=9.124;DP=337;FS=26.810;HRun=0;HaplotypeScore=66.3291;InbreedingCoeff=-0.3134;MQ=36.38;MQ0=2;MQRankSum=-5.723;QD=4.39;ReadPosRankSum=3.324;VQSLOD=0.4828;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,1:13:49.21:49,0,118	0/0:8,0:8:24.08:0,24,483	0/0:10,0:4:8.96:0,9,121	0/0:4,0:3:3.01:0,3,43	0/0:8,3:11:2.47:0,2,51	0/1:6,2:8:75.12:75,0,225	0/0:13,0:13:20.90:0,21,546	0/1:19,3:22:81.77:82,0,535	0/1:8,2:10:54.80:55,0,407	0/1:7,2:9:93.86:94,0,177	0/0:12,0:12:25.35:0,25,419	0/0:5,0:5:8.70:0,9,109	0/0:17,1:18:7.57:0,8,541	0/1:12,2:14:83.62:84,0,167	0/0:10,0:10:29.89:0,30,412	0/1:11,3:14:99:109,0,447	0/0:11,0:11:7.71:0,8,352	0/0:9,0:9:20.75:0,21,377	0/1:17,2:17:59.43:59,0,508	0/0:14,0:13:16.63:0,17,253	0/0:18,0:19:47.86:0,48,734	0/0:10,1:11:0.68:0,1,195	0/1:4,3:7:33.79:34,0,124	0/0:12,1:13:1.23:0,1,275	0/1:21,4:25:57.30:57,0,912	0/1:8,3:10:99:116,0,328	0/0:12,1:13:30.06:0,30,468	0/0:2,0:2:5.85:0,6,75
chr10	77121405	.	G	GAA	178.69	PASS	AB=0.917;AC=9;AF=0.161;AN=56;BaseQRankSum=8.151;DP=435;FS=26.908;HRun=0;HaplotypeScore=97.5119;InbreedingCoeff=-0.1780;MQ=55.53;MQ0=2;MQRankSum=-5.684;QD=1.44;ReadPosRankSum=-3.253;VQSLOD=-0.3435;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:17.20:0,17,375	0/0:8,0:8:24.08:0,24,364	0/1:15,0:9:0.36:0,0,201	0/0:12,0:10:21.07:0,21,324	0/0:15,0:15:16.43:0,16,269	0/1:12,0:12:9.56:10,0,277	0/0:15,0:16:19.85:0,20,577	0/1:29,3:32:99:165,0,809	0/0:14,0:14:20.54:0,21,431	0/0:13,0:12:15.18:0,15,374	0/0:21,0:21:53.49:0,53,813	0/1:7,1:8:32.25:32,0,271	0/1:18,0:18:9.18:9,0,506	0/0:10,0:10:19:0,19,311	0/1:11,1:12:23.11:23,0,379	0/0:16,0:16:9.83:0,10,424	0/0:15,0:15:42.11:0,42,617	0/0:10,0:10:30.10:0,30,476	0/0:26,1:23:14.06:0,14,762	0/0:16,0:15:26.54:0,27,517	0/0:29,0:29:72.07:0,72,1029	0/1:13,1:14:13.13:13,0,356	0/1:8,1:9:12.50:13,0,223	0/0:15,0:15:24.04:0,24,340	0/0:29,0:29:76.09:0,76,1143	0/0:12,0:11:32.72:0,33,449	0/0:18,0:18:54.18:0,54,859	0/1:2,1:3:43.78:44,0,85
chr10	77126090	.	G	GCA	6207.86	PASS	AB=0.674;AC=26;AF=0.500;AN=52;BaseQRankSum=-9.753;DP=605;FS=10.766;HRun=0;HaplotypeScore=93.4453;InbreedingCoeff=-0.2717;MQ=68.88;MQ0=3;MQRankSum=1.163;QD=13.24;ReadPosRankSum=-0.419;VQSLOD=3.7965;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:35:6:53,6,0	1/1:2,7:9:18.06:277,18,0	./.	./.	0/1:8,5:14:50.27:151,0,50	0/1:11,8:19:57.35:291,0,57	0/1:20,15:36:99:408,0,120	1/1:13,8:22:15.87:265,16,0	0/0:8,0:8:14.98:0,15,147	0/1:7,14:22:31.66:452,0,32	0/1:5,9:15:55.40:250,0,55	0/0:24,0:28:53.48:0,53,534	0/0:15,0:16:4.77:0,5,232	0/1:9,16:25:48.57:466,0,49	0/1:7,9:17:27.40:339,0,27	0/1:7,13:22:29.16:449,0,29	0/1:19,24:44:99:535,0,172	0/1:12,12:24:99:414,0,142	0/1:9,8:18:99:174,0,118	0/1:10,8:19:30.21:167,0,30	0/1:29,22:49:99:497,0,104	0/0:12,0:16:38.76:0,39,393	0/1:17,0:19:16.51:17,0,177	0/0:36,0:38:43.74:0,44,630	1/1:6,9:15:16.05:316,16,0	1/1:10,9:21:10.77:411,11,0	0/1:5,10:15:16.02:213,0,16	0/1:1,1:3:13.65:63,0,14
chr10	77126363	.	CT	C	11749.64	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=15.868;DP=569;FS=16.540;HRun=2;HaplotypeScore=89.8138;InbreedingCoeff=0.9914;MQ=80.83;MQ0=0;MQRankSum=-0.811;QD=33.96;ReadPosRankSum=1.001;VQSLOD=3.2104;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1760	1/1:3,8:11:27.08:332,27,0	0/0:20,1:22:12.74:0,13,472	0/0:7,0:7:17.27:0,17,222	0/0:17,0:17:48.15:0,48,699	1/1:0,22:22:66.21:818,66,0	1/1:1,24:25:66.21:818,66,0	1/1:1,27:28:81.24:990,81,0	0/0:21,0:21:63.21:0,63,943	1/1:3,22:25:60.16:731,60,0	1/1:0,11:11:30.09:374,30,0	0/0:25,0:25:75.23:0,75,1101	0/0:24,0:24:72.23:0,72,1059	1/1:0,21:21:57.18:707,57,0	1/1:1,32:33:93.29:1153,93,0	1/1:2,26:28:81.24:993,81,0	1/1:0,22:22:54.17:669,54,0	1/1:0,21:21:54.17:669,54,0	1/1:1,8:9:24.08:298,24,0	1/1:0,7:7:21.07:260,21,0	1/1:1,23:24:63.20:781,63,0	0/0:15,0:15:45.15:0,45,675	0/0:10,0:10:30.10:0,30,449	0/0:24,0:24:72.23:0,72,1052	0/0:18,0:18:48.16:0,48,720	1/1:0,23:23:66.21:818,66,0	1/1:0,31:31:93.29:1153,93,0	1/1:0,5:5:15.05:186,15,0
chr10	77127737	.	C	CT	399.08	PASS	AB=0.875;AC=3;AF=0.054;AN=56;BaseQRankSum=-2.194;DP=555;FS=0.000;HRun=11;HaplotypeScore=62.8648;InbreedingCoeff=0.4794;MQ=74.00;MQ0=1;MQRankSum=-0.999;QD=10.23;ReadPosRankSum=-1.515;VQSLOD=2.4046;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:25:27.86:464,28,0	0/0:6,0:6:14.94:0,15,116	0/0:18,0:17:15.38:0,15,116	0/0:16,0:16:0.05:0,0,58	0/0:25,0:29:68.82:0,69,503	0/0:27,0:28:66.98:0,67,500	0/0:15,0:17:45.90:0,46,334	0/0:25,1:29:23.44:0,23,335	0/0:12,0:14:39.94:0,40,290	0/0:24,1:25:29.27:0,29,404	0/0:17,1:19:10.42:0,10,252	0/0:25,0:27:61.75:0,62,470	0/0:18,0:18:41.77:0,42,323	0/0:9,0:9:20.92:0,21,162	0/0:21,0:21:50.78:0,51,395	0/0:15,0:18:33.93:0,34,244	0/0:20,1:21:20.32:0,20,332	0/0:22,0:22:56.70:0,57,435	0/0:11,0:13:11.17:0,11,155	0/0:17,0:17:38.80:0,39,298	0/0:14,0:16:25.88:0,26,189	0/0:24,1:25:20.35:0,20,341	0/0:28,0:28:53.73:0,54,418	0/0:15,0:15:29.80:0,30,226	0/0:14,2:16:8.37:0,8,245	0/0:21,0:22:58.81:0,59,447	0/0:22,1:24:28.30:0,28,387	0/1:11,2:14:40.33:40,0,95
chr10	77127851	.	GGAACCGAGT	G	1150.72	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.500;DP=512;FS=1.008;HRun=0;HaplotypeScore=147.2164;InbreedingCoeff=0.8249;MQ=80.34;MQ0=0;MQRankSum=-4.325;QD=50.03;ReadPosRankSum=-1.152;VQSLOD=2.9812;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,15:23:45.13:1245,45,0	0/0:7,0:7:15.05:0,15,609	0/0:16,0:16:47.83:0,48,2040	0/0:11,0:11:24.08:0,24,1133	0/0:13,0:13:39.11:0,39,1764	0/0:20,0:20:54.19:0,54,2666	0/0:22,0:22:63.22:0,63,2941	0/0:15,0:15:45.15:0,45,1905	0/0:24,0:24:69.24:0,69,3328	0/0:19,0:18:51.18:0,51,2392	0/0:5,0:5:15.05:0,15,618	0/0:28,0:28:84.29:0,84,4148	0/0:24,0:24:72.25:0,72,3296	0/0:22,0:22:63.22:0,63,3006	0/0:18,0:18:48.15:0,48,2106	0/0:19,0:19:48.16:0,48,2239	0/0:39,0:39:99:0,102,4978	0/0:22,0:22:66.20:0,66,2870	0/0:18,0:18:54.19:0,54,2603	0/0:13,0:13:36.12:0,36,1783	0/0:13,0:13:26.97:0,27,1254	0/0:18,0:18:51.18:0,51,2277	0/0:10,0:10:27.09:0,27,1243	0/0:25,0:25:69.24:0,69,3263	0/0:13,0:13:33.11:0,33,1399	0/0:24,0:24:69.24:0,69,3403	0/0:28,0:26:78.27:0,78,3679	0/0:3,0:3:3.01:0,3,149
chr10	77127924	.	T	TCA	22239.08	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=14.762;DP=694;FS=0.305;HRun=0;HaplotypeScore=113.1255;InbreedingCoeff=0.9965;MQ=86.21;MQ0=0;MQRankSum=-7.651;QD=48.03;ReadPosRankSum=2.886;VQSLOD=5.8225;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:34:78.01:1472,78,0	1/1:0,9:9:24.08:454,24,0	0/0:28,0:28:81.12:0,81,1160	0/0:21,0:22:56.62:0,57,834	1/1:0,20:21:45.15:848,45,0	1/1:1,23:24:69.24:1305,69,0	1/1:1,28:29:72.25:1368,72,0	1/1:0,16:16:48.16:870,48,0	0/0:38,0:38:99:0,114,1746	1/1:0,25:26:78.23:1370,78,0	1/1:1,11:12:30.10:569,30,0	0/0:38,0:38:99:0,108,1654	0/0:32,0:32:90.28:0,90,1355	1/1:2,33:35:90.31:1706,90,0	1/1:2,30:32:84.28:1596,84,0	1/1:1,27:28:23.29:1207,23,0	1/1:1,37:38:96.33:1806,96,0	1/1:2,19:21:57.20:1074,57,0	1/1:0,16:16:48.14:866,48,0	1/1:1,14:16:42.14:773,42,0	1/1:2,25:27:54.19:1025,54,0	0/0:18,0:18:54.18:0,54,827	0/0:15,0:15:45.15:0,45,689	0/0:40,0:40:99:0,120,1838	1/1:1,21:23:51.17:966,51,0	1/1:1,31:32:93.32:1766,93,0	1/1:0,17:18:48.16:912,48,0	1/1:0,5:5:15.05:283,15,0
chr10	77128430	.	T	TCTTTGCTTCCTCA	5598.01	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.288;DP=767;FS=10.326;HRun=0;HaplotypeScore=269.4721;InbreedingCoeff=0.9989;MQ=90.56;MQ0=0;MQRankSum=-9.246;QD=139.95;ReadPosRankSum=0.190;VQSLOD=3.6871;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,22:40:90.31:5598,90,0	0/0:13,0:13:39.13:0,39,1553	0/0:27,0:27:81.11:0,81,2875	0/0:35,0:35:99:0,105,3594	0/0:29,0:29:87.30:0,87,3238	0/0:24,0:24:69.22:0,69,2425	0/0:17,0:17:51.16:0,51,1899	0/0:38,0:38:99:0,108,4103	0/0:25,0:25:72.23:0,72,2838	0/0:32,0:31:90.29:0,90,3227	0/0:9,0:9:27.09:0,27,1075	0/0:22,0:22:66.23:0,66,2733	0/0:33,0:33:96.07:0,96,3542	0/0:31,0:31:90.31:0,90,3578	0/0:33,0:33:99:0,99,4032	0/0:33,0:33:93.32:0,93,3766	0/0:37,0:37:99:0,111,4257	0/0:34,0:34:99:0,99,3982	0/0:18,0:18:51.18:0,51,2061	0/0:20,0:20:57.18:0,57,2144	0/0:48,0:48:99:0,141,5522	0/0:27,0:27:81.28:0,81,3180	0/0:16,0:16:45.15:0,45,1799	0/0:35,0:35:99:0,102,4058	0/0:21,0:21:63.20:0,63,2401	0/0:22,0:22:57.19:0,57,2125	0/0:26,0:26:75.21:0,75,2703	0/0:22,0:22:66.23:0,66,2736
chr10	77130621	.	CCCTT	C	15079.18	PASS	AB=0.527;AC=33;AF=0.589;AN=56;BaseQRankSum=15.167;DP=684;FS=1.393;HRun=0;HaplotypeScore=107.8173;InbreedingCoeff=0.9530;MQ=56.81;MQ0=6;MQRankSum=1.682;QD=40.10;ReadPosRankSum=3.077;VQSLOD=5.1940;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,102,2411	1/1:1,11:12:30.10:516,30,0	0/0:36,0:13:24.48:0,24,408	0/0:30,0:12:23.76:0,24,466	0/0:28,0:28:83.63:0,84,1805	1/1:3,23:26:48.16:853,48,0	0/1:3,26:29:1.89:1000,0,2	1/1:1,12:11:30.09:461,30,0	0/0:18,0:18:48.16:0,48,1201	1/1:2,22:24:66.23:1143,66,0	1/1:4,20:23:51.17:866,51,0	0/0:26,0:26:78.27:0,78,1884	0/0:22,0:22:60.21:0,60,1444	1/1:2,14:16:30.10:534,30,0	1/1:3,28:31:72.25:1256,72,0	1/1:3,23:26:57.20:1007,57,0	1/1:3,18:21:30.10:534,30,0	1/1:1,12:13:18.06:320,18,0	1/1:0,15:15:39.13:678,39,0	1/1:2,26:28:78.26:1328,78,0	1/1:0,23:23:57.19:998,57,0	0/0:21,0:21:63.22:0,63,1580	0/0:28,0:28:69.24:0,69,1678	0/0:32,0:32:87.29:0,87,2093	0/0:27,0:27:66.19:0,66,1496	1/1:0,30:30:90.29:1558,90,0	1/1:2,22:24:57.20:1013,57,0	1/1:2,19:21:57.20:1014,57,0
chr10	77131478	.	ATATTTGTGCACCTTCC	A	29030.05	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=17.113;DP=547;FS=3.676;HRun=0;HaplotypeScore=259.0734;InbreedingCoeff=0.9932;MQ=87.42;MQ0=0;MQRankSum=-17.338;QD=98.74;ReadPosRankSum=4.917;VQSLOD=4.3872;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,7795	1/1:4,8:12:21.07:994,21,0	0/0:33,0:33:96.33:0,96,5853	0/0:16,0:16:48.10:0,48,3226	0/0:28,0:28:75.26:0,75,5513	1/1:4,21:25:54.19:2555,54,0	1/1:2,10:12:24.08:1136,24,0	1/1:6,14:20:42.12:1664,42,0	0/0:27,0:27:81.28:0,81,6424	1/1:6,13:19:39.12:1729,39,0	1/1:2,20:22:57.11:2417,57,0	0/0:16,0:16:48.16:0,48,3800	0/0:25,0:25:75.26:0,75,5616	1/1:1,16:17:45.15:2130,45,0	1/1:3,16:19:48.16:2272,48,0	1/1:4,19:23:54.19:2556,54,0	1/1:3,11:14:24.08:1136,24,0	1/1:4,6:10:11.99:568,12,0	1/1:2,9:11:24.08:1136,24,0	1/1:5,11:16:33.07:1355,33,0	1/1:4,11:15:21.07:994,21,0	0/0:10,0:10:30.10:0,30,2365	0/0:20,0:20:60.21:0,60,4425	0/0:17,0:17:51.18:0,51,3873	0/0:25,0:24:75.26:0,75,5631	1/1:6,14:20:42.14:1988,42,0	1/1:4,24:28:66.23:3124,66,0	1/1:2,9:11:27.09:1278,27,0
chr10	77132607	.	A	AT	1759.98	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-10.007;DP=684;FS=5.542;HRun=5;HaplotypeScore=63.9867;InbreedingCoeff=0.9286;MQ=67.15;MQ0=0;MQRankSum=-1.862;QD=33.21;ReadPosRankSum=1.496;VQSLOD=4.3536;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,48:53:99:1855,141,0	0/0:7,0:7:18.04:0,18,193	0/0:6,0:6:9.01:0,9,89	0/0:8,0:8:17.25:0,17,140	0/0:21,0:21:63.08:0,63,640	0/0:23,0:23:60.15:0,60,645	0/0:25,0:25:66.16:0,66,709	0/0:21,0:21:54.11:0,54,561	0/0:32,0:32:90.19:0,90,948	0/0:30,0:30:75.16:0,75,785	0/0:25,0:25:75.18:0,75,798	0/0:31,0:31:93.11:0,93,974	0/0:25,0:25:69.13:0,69,729	0/0:31,0:31:84.17:0,84,879	0/0:35,0:35:93.23:0,93,999	0/0:19,0:19:51.10:0,51,534	0/0:30,0:30:87.22:0,87,935	0/0:25,0:25:63.13:0,63,666	0/0:26,0:26:66.15:0,66,696	0/0:19,0:19:51.10:0,51,532	0/0:38,0:38:99:0,102,1071	0/0:17,0:17:51.11:0,51,539	0/0:28,0:28:81.20:0,81,870	0/0:35,0:35:99:0,99,1063	0/0:22,0:22:63.13:0,63,667	0/0:29,0:29:78.18:0,78,825	0/0:14,0:14:42.11:0,42,451	0/0:9,0:9:27.07:0,27,290
chr10	77133998	.	TAC	T	789.88	PASS	AB=0.872;AC=5;AF=0.089;AN=56;BaseQRankSum=2.271;DP=691;FS=3.117;HRun=0;HaplotypeScore=124.3243;InbreedingCoeff=0.2636;MQ=53.79;MQ0=7;MQRankSum=3.301;QD=10.26;ReadPosRankSum=2.136;VQSLOD=3.3749;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:3.87:0,4,45	0/0:9,0:12:5.91:0,6,52	0/0:32,0:18:3.01:0,3,38	0/0:29,0:17:14.95:0,15,170	0/1:9,14:24:44.69:412,0,45	0/0:11,0:20:17.76:0,18,156	0/0:19,0:32:7.69:0,8,71	0/0:38,0:37:35.53:0,36,357	0/0:29,0:29:63.19:0,63,924	0/0:18,0:37:69.55:0,70,637	0/1:15,0:17:0.03:0,0,46	0/0:27,1:28:15.68:0,16,680	0/0:25,2:26:10.82:0,11,609	0/0:10,0:21:24.47:0,24,127	0/0:13,0:25:16.79:0,17,112	0/0:12,0:23:18.64:0,19,183	0/0:14,0:20:11.74:0,12,91	0/0:11,0:13:20.26:0,20,215	0/0:18,0:19:20.88:0,21,172	0/0:7,0:11:5.74:0,6,38	0/0:31,0:41:7.36:0,7,60	0/0:14,0:14:27.08:0,27,396	0/0:19,0:18:39.13:0,39,592	0/0:40,0:39:21.04:0,21,1109	1/1:7,19:26:42.12:481,42,0	0/0:23,0:24:43.01:0,43,358	0/0:11,0:19:23.56:0,24,175	0/1:7,0:10:5.25:5,0,21
chr10	77135399	.	G	GA	1863.66	PASS	AB=0.879;AC=25;AF=0.446;AN=56;BaseQRankSum=4.686;DP=667;FS=3.106;HRun=12;HaplotypeScore=110.7315;InbreedingCoeff=0.1182;MQ=71.43;MQ0=7;MQRankSum=-1.872;QD=4.48;ReadPosRankSum=-4.546;VQSLOD=0.9395;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:37,1:38:67.76:0,68,628	0/1:6,0:6:7.90:18,0,8	0/0:58,0:29:6.07:0,6,104	0/1:41,0:20:11.61:12,0,50	0/1:10,22:34:14.61:474,0,15	1/1:1,1:7:2.94:18,3,0	0/1:15,4:21:15.47:74,0,15	1/1:24,2:26:18.83:113,19,0	0/0:23,1:24:28.18:0,28,367	0/1:13,1:23:2.41:101,0,2	1/1:14,0:14:10.89:99,11,0	0/0:17,0:19:43.63:0,44,299	0/0:24,0:24:25.28:0,25,307	0/0:12,0:12:0.24:0,0,1	0/1:26,1:28:0.72:126,0,1	0/1:18,1:19:20.57:110,0,21	0/1:10,9:19:3.57:79,0,4	1/1:28,0:28:5.35:174,5,0	0/1:27,1:28:9.19:74,0,9	0/1:18,1:20:10.08:57,0,10	0/1:20,1:21:17.56:92,0,18	0/0:25,0:27:34.97:0,35,370	0/0:19,0:19:39.15:0,39,355	0/0:25,0:28:50.88:0,51,458	1/1:6,9:14:2.14:181,2,0	0/1:30,0:30:8.15:64,0,8	1/1:22,3:25:18.03:166,18,0	0/1:10,0:8:1.70:2,0,4
chr10	77135411	.	AC	A	6095.12	PASS	AB=0.956;AC=36;AF=0.643;AN=56;BaseQRankSum=3.734;DP=686;FS=1.742;HRun=1;HaplotypeScore=88.8863;InbreedingCoeff=0.8426;MQ=69.55;MQ0=7;MQRankSum=-2.385;QD=14.01;ReadPosRankSum=-7.995;VQSLOD=1.0310;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:99:0,116,1117	1/1:9,0:9:26.79:245,27,0	0/1:56,1:28:11.82:12,0,259	0/1:36,3:18:50.46:59,0,50	0/0:36,0:36:18.39:0,18,402	1/1:9,0:9:11.99:103,12,0	1/1:22,1:23:54.59:430,55,0	1/1:25,3:28:60.57:484,61,0	0/0:28,0:29:84.44:0,84,760	1/1:21,1:22:44.29:390,44,0	1/1:16,0:16:46.61:363,47,0	0/0:22,0:22:60.02:0,60,547	0/0:24,1:24:33.58:0,34,524	1/1:8,0:8:22.50:166,22,0	1/1:23,1:24:61.67:384,62,0	1/1:21,0:20:27.58:390,28,0	1/1:20,0:20:41.10:316,41,0	1/1:26,1:27:60.53:370,61,0	1/1:25,1:26:61.86:438,62,0	1/1:19,1:20:54.95:386,55,0	1/1:17,1:18:49.72:363,50,0	0/0:27,0:27:59.97:0,60,645	0/0:25,0:25:51.96:0,52,666	0/0:31,0:31:65.96:0,66,773	0/0:13,0:12:24.60:0,25,167	1/1:29,0:29:79.25:512,79,0	1/1:28,0:28:74.46:528,74,0	1/1:9,2:9:24.77:156,25,0
chr10	77136495	.	TACACACACACAC	T	3832.43	PASS	AC=32;AF=0.615;AN=52;BaseQRankSum=5.248;DP=506;FS=6.694;HRun=0;HaplotypeScore=154.4828;InbreedingCoeff=0.7095;MQ=65.61;MQ0=16;MQRankSum=-4.234;QD=14.30;ReadPosRankSum=0.436;VQSLOD=2.3147;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:33.01:0,33,1525	1/1:2,3:5:6.02:206,6,0	./.	./.	0/0:9,0:12:1.82:0,2,5	1/1:14,2:16:18.04:355,18,0	1/1:22,0:23:3.22:161,3,0	1/1:16,0:16:1.79:18,2,0	0/0:8,0:8:9.03:0,9,335	1/1:17,0:20:14.17:301,14,0	1/1:13,1:16:12.03:204,12,0	0/0:19,0:22:42.14:0,42,1608	0/0:10,0:10:9.03:0,9,391	1/1:10,5:16:12.51:374,13,0	1/1:11,9:19:9.03:278,9,0	1/1:6,6:14:18.06:580,18,0	1/1:12,7:19:7.84:192,8,0	1/1:8,1:8:1.22:100,1,0	1/1:6,0:5:3.47:30,3,0	1/1:10,5:15:3.48:104,3,0	1/1:33,1:34:23.94:221,24,0	0/0:24,0:24:39.10:0,39,1323	0/0:12,0:12:18.03:0,18,735	0/0:24,0:24:30.10:0,30,1384	0/0:13,0:17:6.01:0,6,102	1/1:10,5:16:12.48:239,12,0	1/1:8,9:19:13.26:471,13,0	0/0:7,0:5:1.55:0,2,6
chr10	77138039	.	G	GCGCA	409.43	PASS	AB=0.928;AC=9;AF=0.161;AN=56;BaseQRankSum=5.619;DP=800;FS=1.225;HRun=0;HaplotypeScore=156.9724;InbreedingCoeff=0.2507;MQ=64.83;MQ0=23;MQRankSum=-0.713;QD=2.59;ReadPosRankSum=-2.422;VQSLOD=2.0750;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:42:25.31:25,0,245	0/0:13,0:13:20.24:0,20,304	0/0:41,0:23:66.02:0,66,645	0/0:41,0:23:62.86:0,63,672	1/1:0,7:7:3.01:83,3,0	0/1:24,0:26:29.85:30,0,170	0/0:36,0:35:49.98:0,50,508	0/0:26,0:26:20.24:0,20,507	0/0:31,0:31:81.35:0,81,1112	0/0:24,0:26:8.83:0,9,520	0/0:12,0:13:16.49:0,16,98	0/0:34,0:35:79.14:0,79,1278	0/0:25,0:26:67.33:0,67,903	0/0:34,0:33:26.60:0,27,426	0/0:35,0:35:49:0,49,377	0/0:27,0:26:42.90:0,43,392	0/0:42,0:38:54.67:0,55,362	0/0:30,0:31:21.13:0,21,297	0/1:15,0:15:24.51:25,0,113	0/0:13,0:14:20.85:0,21,208	0/0:70,0:68:75.19:0,75,896	0/0:20,0:20:50.87:0,51,637	0/0:13,0:16:36.04:0,36,473	0/0:50,0:52:99:0,145,2246	1/1:7,17:27:15:336,15,0	0/1:26,0:24:23.78:24,0,190	0/1:11,0:11:29.24:29,0,75	0/0:11,0:10:11.70:0,12,147
chr10	77138067	.	A	ACG	7963.95	PASS	AB=0.655;AC=28;AF=0.500;AN=56;BaseQRankSum=-10.209;DP=820;FS=5.384;HRun=0;HaplotypeScore=100.4836;InbreedingCoeff=0.3212;MQ=56.09;MQ0=27;MQRankSum=2.246;QD=13.97;ReadPosRankSum=2.326;VQSLOD=4.4149;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:42:85.27:180,0,85	0/1:11,1:11:30.36:137,0,30	0/0:17,0:2:2.98:0,3,22	0/0:25,0:8:17.93:0,18,178	0/0:8,0:8:5.80:0,6,60	1/1:6,19:25:8.53:345,9,0	0/1:8,31:38:15.56:478,0,16	1/1:7,14:21:27.04:332,27,0	0/0:30,0:30:76.11:0,76,882	1/1:24,5:29:13.38:622,13,0	1/1:1,15:16:16.95:293,17,0	0/0:32,0:31:83:0,83,1031	0/0:28,0:28:50.63:0,51,731	0/1:6,33:39:52.09:473,0,52	1/1:4,34:40:18:715,18,0	0/1:4,24:27:3.47:537,0,3	1/1:7,36:40:7.48:878,7,0	1/1:6,29:35:0.09:735,0,0	1/1:9,16:21:34.97:509,35,0	0/1:2,9:11:12.28:59,0,12	0/1:24,67:91:99:490,0,134	0/0:17,0:17:44.81:0,45,540	0/0:15,0:15:33.02:0,33,390	0/0:53,0:53:99:0,144,1816	0/0:24,0:23:4.42:0,4,133	1/1:6,26:31:43.18:781,43,0	1/1:3,10:12:5.40:305,5,0	0/1:6,16:20:28.77:93,0,29
chr10	77139836	.	A	AT	9015.38	PASS	AB=0.669;AC=35;AF=0.625;AN=56;BaseQRankSum=-10.572;DP=655;FS=4.046;HRun=10;HaplotypeScore=68.6975;InbreedingCoeff=0.6191;MQ=72.38;MQ0=0;MQRankSum=-0.809;QD=19.90;ReadPosRankSum=0.029;VQSLOD=5.7158;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,1:32:22.01:0,22,521	1/1:4,11:15:27.06:284,27,0	0/0:15,0:16:26.15:0,26,202	0/1:7,0:8:13.25:13,0,19	1/1:10,15:27:4.51:423,5,0	1/1:3,13:16:14.45:359,14,0	1/1:4,20:24:54.05:561,54,0	0/1:11,22:33:29.44:523,0,29	0/0:29,0:30:70.93:0,71,572	0/1:6,16:22:4.17:370,0,4	1/1:1,15:16:45.11:480,45,0	0/0:24,1:26:29.74:0,30,433	0/0:23,0:23:53.87:0,54,439	1/1:3,14:17:33.08:352,33,0	1/1:2,29:32:69.01:718,69,0	1/1:4,31:35:41.51:642,42,0	0/1:9,23:33:29.57:521,0,30	1/1:4,16:21:20.77:406,21,0	1/1:3,15:19:47.94:486,48,0	0/1:8,19:27:10.82:500,0,11	1/1:3,12:15:11.45:327,11,0	0/0:21,0:22:24.97:0,25,350	0/0:24,0:24:56.87:0,57,463	0/0:27,0:29:72.94:0,73,578	1/1:4,23:27:41.52:647,42,0	1/1:8,21:29:35.50:583,36,0	1/1:4,26:30:62.78:660,63,0	1/1:0,7:7:15.04:160,15,0
chr10	77139987	.	A	AAC	1150.16	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.213;DP=734;FS=6.336;HRun=0;HaplotypeScore=108.4499;InbreedingCoeff=0.9873;MQ=70.88;MQ0=7;MQRankSum=-2.436;QD=25.00;ReadPosRankSum=-0.601;VQSLOD=4.4193;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,27:45:78.27:1245,78,0	0/0:9,0:9:21.05:0,21,242	0/0:39,0:30:35.89:0,36,388	0/0:26,0:17:22.59:0,23,254	0/0:25,0:25:54.12:0,54,635	0/0:27,0:27:33.10:0,33,398	0/0:33,0:34:69.04:0,69,806	0/0:34,0:35:59.99:0,60,674	0/0:29,0:29:72.22:0,72,869	0/0:21,0:21:54.13:0,54,648	0/0:21,0:21:39.12:0,39,470	0/0:30,0:31:71.89:0,72,843	0/0:28,0:29:71.54:0,72,819	0/0:16,0:16:24.06:0,24,278	0/0:27,0:28:47.92:0,48,545	0/0:36,0:37:59.88:0,60,701	0/0:27,0:27:63.18:0,63,749	0/0:17,0:15:26.57:0,27,299	0/0:18,0:20:44.79:0,45,488	0/0:15,0:16:44.96:0,45,509	0/0:32,0:31:69.21:0,69,832	0/0:28,0:28:60:0,60,689	0/0:19,0:20:38.95:0,39,448	0/0:46,0:48:99:0,117,1332	0/0:17,0:17:42.13:0,42,501	0/0:24,0:24:42.13:0,42,519	0/0:21,0:20:36:0,36,433	0/0:10,0:10:24.07:0,24,289
chr10	77140049	.	T	TGTGAGAGAGAGAGAGAGAGA	11864.35	PASS	AB=0.784;AC=32;AF=0.571;AN=56;BaseQRankSum=-1.498;DP=789;FS=7.014;HRun=0;HaplotypeScore=296.9998;InbreedingCoeff=0.5554;MQ=55.56;MQ0=34;MQRankSum=-7.471;QD=24.11;ReadPosRankSum=-5.182;VQSLOD=1.9267;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:32:23.86:156,0,24	0/1:5,4:10:4.87:484,0,5	0/1:66,0:16:6.74:7,0,294	0/0:64,0:22:12.98:0,13,376	0/0:15,0:31:2.04:0,2,22	0/1:5,0:20:0:1,0,0	1/1:31,0:29:9.08:427,9,0	1/1:30,0:27:36.65:1100,37,0	0/0:26,0:26:75.12:0,75,2527	1/1:19,0:28:77.97:1583,78,0	1/1:6,0:18:0.47:1,0,0	0/0:24,0:25:55.12:0,55,2221	0/0:30,0:31:83.99:0,84,2110	0/0:5,10:21:0:0,0,0	1/1:10,0:34:5.79:296,6,0	1/1:13,17:41:24.07:1421,24,0	1/1:15,0:15:38.80:563,39,0	0/1:6,4:9:9.32:561,0,9	1/1:21,0:20:48.25:618,48,0	1/1:31,0:30:36.78:463,37,0	1/1:13,0:12:20.99:190,21,0	0/0:20,0:21:59.98:0,60,1662	0/0:22,0:23:57.07:0,57,1988	0/0:51,0:51:99:0,100,4282	0/1:18,0:25:1.91:158,0,2	1/1:10,6:22:6.95:2109,7,0	1/1:13,0:28:28.02:1520,28,0	1/1:8,0:8:14.02:207,14,0
chr10	77140633	.	C	CT	1218.89	PASS	AB=0.805;AC=33;AF=0.589;AN=56;BaseQRankSum=-2.006;DP=252;FS=2.266;HRun=14;HaplotypeScore=49.7149;InbreedingCoeff=0.1032;MQ=55.28;MQ0=4;MQRankSum=-2.109;QD=5.86;ReadPosRankSum=-2.675;VQSLOD=1.3182;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:13:0.97:74,1,0	0/1:3,1:4:13.27:20,0,13	0/1:13,0:6:1.24:1,0,5	0/0:8,0:2:2.68:0,3,11	1/1:13,1:14:5.96:46,6,0	1/1:3,2:5:9:79,9,0	0/1:6,7:13:4.26:91,0,4	1/1:13,8:21:23.46:205,23,0	0/0:5,0:6:7.93:0,8,44	1/1:6,0:6:2.92:17,3,0	0/1:9,5:13:3:92,0,3	0/0:7,0:8:10.87:0,11,63	0/0:5,0:5:5.32:0,5,28	1/1:4,0:4:8.97:73,9,0	1/1:3,0:4:2.12:40,2,0	1/1:2,1:3:3:26,3,0	0/1:5,8:15:9.38:131,0,9	0/1:3,6:9:10.26:44,0,10	0/1:8,2:10:4.46:77,0,4	1/1:3,2:5:8.84:66,9,0	0/1:6,1:8:0.85:21,0,1	0/0:10,0:11:9.28:0,9,58	0/0:6,0:6:8.84:0,9,56	0/1:15,0:14:5.37:5,0,78	0/1:4,1:5:10.24:42,0,10	1/1:5,3:8:5.19:73,5,0	1/1:3,6:9:1.70:132,2,0	0/1:5,1:5:12.82:20,0,13
chr10	77142922	.	A	AC	165.13	PASS	AB=0.969;AC=10;AF=0.200;AN=50;BaseQRankSum=-1.595;DP=559;FS=1.127;HRun=0;HaplotypeScore=67.5347;InbreedingCoeff=-0.2779;MQ=34.86;MQ0=130;MQRankSum=3.902;QD=0.89;ReadPosRankSum=-2.531;VQSLOD=0.4551;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:8,5:12:26.19:26,0,32	0/0:35,0:7:10.56:0,11,86	0/0:38,0:8:17.72:0,18,123	./.	0/1:21,0:15:45.27:45,0,104	0/1:17,0:16:11.40:11,0,59	0/0:40,0:35:8.01:0,8,306	0/0:11,0:7:18.69:0,19,125	0/1:25,1:19:38.28:38,0,133	0/1:16,0:16:38.01:47,0,38	0/0:11,0:8:20.79:0,21,148	0/0:10,0:7:17.82:0,18,124	0/0:18,0:15:8.32:0,8,140	0/0:19,0:16:24.74:0,25,225	0/1:19,0:16:9.52:10,0,148	0/0:43,0:31:25.21:0,25,299	0/0:31,0:19:12.51:0,13,151	0/0:33,0:19:3.64:0,4,215	0/1:18,0:15:43.26:43,0,77	0/1:13,0:6:11.54:12,0,37	0/0:14,0:10:29.73:0,30,215	0/0:13,0:6:14.46:0,14,93	0/0:12,0:4:8.57:0,9,68	./.	0/1:24,0:21:45.62:46,0,176	0/0:31,1:29:5.79:0,6,236	0/1:19,0:9:21.37:21,0,31
chr10	77144926	.	T	TA	4898.04	PASS	AB=0.772;AC=39;AF=0.696;AN=56;BaseQRankSum=-2.962;DP=491;FS=14.273;HRun=13;HaplotypeScore=58.5821;InbreedingCoeff=0.4365;MQ=69.32;MQ0=2;MQRankSum=2.920;QD=11.95;ReadPosRankSum=-1.051;VQSLOD=2.7771;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:19:24.28:118,24,0	1/1:1,4:5:9.01:84,9,0	0/1:18,0:8:12.23:12,0,15	0/1:7,0:5:0:0,0,0	1/1:6,2:21:43.35:264,43,0	0/1:7,5:12:30.34:116,0,30	1/1:2,10:12:9.45:230,9,0	0/1:10,16:26:6.55:325,0,7	0/0:14,0:14:29.61:0,30,201	1/1:9,14:24:22.82:321,23,0	1/1:4,17:23:9.43:325,9,0	0/0:14,1:15:1.82:0,2,153	0/0:18,0:21:47.74:0,48,305	0/1:6,7:13:11.56:47,0,12	1/1:7,7:14:3.48:164,3,0	1/1:7,13:21:12.29:245,12,0	1/1:4,20:28:21.37:394,21,0	0/1:4,17:24:11.17:299,0,11	1/1:3,9:14:22.88:216,23,0	1/1:10,21:35:18.67:501,19,0	1/1:3,5:12:26.97:200,27,0	0/0:16,1:20:8.87:0,9,188	0/1:13,1:15:0.72:1,0,205	0/0:11,0:11:26.69:0,27,179	1/1:1,0:8:17.04:86,17,0	1/1:5,22:28:54.24:461,54,0	1/1:4,17:21:24.49:363,24,0	1/1:1,8:10:14.85:126,15,0
chr10	77145990	.	TA	T	768.94	PASS	AB=0.800;AC=5;AF=0.089;AN=56;BaseQRankSum=5.972;DP=510;FS=0.000;HRun=11;HaplotypeScore=53.9492;InbreedingCoeff=0.7443;MQ=70.43;MQ0=1;MQRankSum=-0.474;QD=13.73;ReadPosRankSum=1.304;VQSLOD=3.5635;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:60.01:0,60,605	0/0:11,0:11:30.08:0,30,320	0/0:13,0:13:21.01:0,21,201	0/0:14,0:11:24.05:0,24,239	1/1:7,23:31:49.77:513,50,0	0/0:16,0:16:42.11:0,42,448	0/0:13,1:14:11.43:0,11,318	0/0:31,0:31:84.20:0,84,884	0/0:14,1:16:11.27:0,11,301	0/0:25,0:25:28.27:0,28,531	0/0:10,1:11:5.33:0,5,240	0/0:21,0:21:44.89:0,45,453	0/0:11,0:11:24.06:0,24,256	0/0:15,0:15:36.07:0,36,369	0/0:12,0:12:33.08:0,33,352	0/0:18,0:18:54.12:0,54,568	0/0:22,0:22:54.08:0,54,560	0/0:14,0:14:39.08:0,39,407	0/0:24,1:25:41.50:0,42,638	0/0:18,0:18:44.93:0,45,448	0/0:21,1:22:29.50:0,29,519	0/0:13,0:13:33.08:0,33,352	0/1:6,2:8:6.58:7,0,142	0/0:24,0:24:47.43:0,47,643	1/1:0,16:17:46.99:375,47,0	0/0:26,0:26:60.13:0,60,621	0/0:22,0:21:57.04:0,57,574	0/0:14,0:14:24.06:0,24,256
chr10	77146184	.	TAG	T	1636.14	PASS	AB=0.847;AC=34;AF=0.630;AN=54;BaseQRankSum=1.261;DP=551;FS=2.399;HRun=0;HaplotypeScore=76.6785;InbreedingCoeff=0.3359;MQ=72.77;MQ0=7;MQRankSum=1.809;QD=4.28;ReadPosRankSum=-0.122;VQSLOD=2.0194;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:29:27.64:0,28,233	1/1:4,2:6:3.01:32,3,0	0/0:24,0:16:0.47:0,0,1	./.	0/1:18,3:20:26.31:26,0,38	1/1:19,7:26:8.76:76,9,0	1/1:12,4:16:6.02:65,6,0	0/0:27,0:27:0.89:0,1,2	0/1:16,2:18:14.30:14,0,166	1/1:16,2:17:6.02:64,6,0	1/1:17,4:19:5.91:49,6,0	0/0:13,0:13:18.06:0,18,254	0/0:13,0:19:15.01:0,15,142	1/1:13,2:16:26.72:246,27,0	0/1:19,5:25:43.63:44,0,144	1/1:12,13:26:8.85:79,9,0	1/1:20,5:25:34.88:330,35,0	1/1:13,10:25:17.64:184,18,0	1/1:22,2:24:8.15:86,8,0	0/1:11,3:14:18.04:41,0,18	1/1:16,1:17:12.47:114,12,0	0/0:10,0:10:8.86:0,9,100	0/0:17,0:16:9.02:0,9,114	0/1:19,1:20:62.81:63,0,227	1/1:10,5:15:6.02:65,6,0	1/1:13,4:16:11.96:102,12,0	1/1:16,7:24:11.84:101,12,0	0/1:4,3:7:2.95:26,0,3
chr10	77147155	.	TATAA	T	537.82	PASS	AC=2;AF=0.040;AN=50;BaseQRankSum=4.683;DP=308;FS=2.546;HRun=0;HaplotypeScore=51.3835;InbreedingCoeff=0.3298;MQ=79.12;MQ0=0;MQRankSum=0.256;QD=23.38;ReadPosRankSum=1.353;VQSLOD=2.7478;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,18:23:39.13:630,39,0	0/0:5,0:5:3.01:0,3,71	./.	0/0:13,0:13:2.97:0,3,20	0/0:12,0:14:6:0,6,76	0/0:18,0:18:42.14:0,42,969	0/0:10,0:10:9.03:0,9,218	0/0:24,0:24:30.10:0,30,705	0/0:5,0:5:9.03:0,9,217	0/0:6,0:6:12.04:0,12,290	0/0:6,0:6:9.03:0,9,216	0/0:7,0:7:6.02:0,6,145	0/0:6,0:6:6.02:0,6,121	0/0:14,0:14:9.03:0,9,217	0/0:14,0:14:18.06:0,18,415	0/0:5,0:5:3.01:0,3,73	0/0:24,0:24:45.15:0,45,1045	0/0:20,0:20:51.16:0,51,1161	0/0:17,0:17:12.04:0,12,259	0/0:5,0:5:3.01:0,3,51	0/0:11,0:11:9.03:0,9,218	./.	0/0:2,0:2:3.01:0,3,72	./.	0/0:9,0:13:18.06:0,18,353	0/0:9,0:9:12.04:0,12,290	0/0:11,0:11:18.06:0,18,411	0/0:11,0:11:27.09:0,27,637
chr10	77148946	.	G	GAGA	415.74	PASS	AB=0.958;AC=7;AF=0.125;AN=56;BaseQRankSum=0.452;DP=236;FS=1.035;HRun=0;HaplotypeScore=70.9773;InbreedingCoeff=0.5834;MQ=86.16;MQ0=0;MQRankSum=1.055;QD=9.45;ReadPosRankSum=-0.805;VQSLOD=2.9811;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,4:10:17.89:320,18,0	0/0:3,0:3:6.02:0,6,92	0/1:22,0:19:32.07:32,0,276	0/0:16,0:13:31.42:0,31,355	1/1:4,0:4:3.01:50,3,0	0/0:11,0:11:30:0,30,415	0/0:15,0:15:33.10:0,33,518	0/0:12,0:12:30.01:0,30,394	0/0:9,0:9:21.07:0,21,348	0/0:6,0:6:15.04:0,15,227	0/0:4,0:4:12:0,12,154	0/0:8,0:8:15.01:0,15,195	0/0:4,0:4:9:0,9,124	0/0:3,0:3:6.02:0,6,97	0/0:13,0:13:21.07:0,21,333	0/0:15,0:15:36.12:0,36,585	0/0:7,0:7:14.97:0,15,213	0/0:9,0:9:15.02:0,15,219	0/0:4,0:4:9.02:0,9,127	0/0:7,0:7:15.05:0,15,239	0/0:5,0:5:8.98:0,9,145	0/0:4,0:4:9:0,9,123	0/0:3,0:3:0.47:0,0,1	0/0:10,0:10:20.76:0,21,315	1/1:7,0:7:12.03:146,12,0	0/0:7,0:7:8.92:0,9,89	0/0:14,0:14:27.07:0,27,421	0/0:3,0:3:6.02:0,6,102
chr10	77148948	.	G	GAA	371.31	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=1.263;DP=223;FS=0.958;HRun=1;HaplotypeScore=61.2032;InbreedingCoeff=0.5507;MQ=89.05;MQ0=0;MQRankSum=1.044;QD=8.44;ReadPosRankSum=-0.215;VQSLOD=0.1844;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:1.54:200,2,0	0/0:3,0:3:8.99:0,9,110	0/1:24,0:20:24.14:24,0,293	0/0:16,0:13:19.19:0,19,283	1/1:2,2:4:3.48:51,3,0	0/0:10,0:10:30.05:0,30,438	0/0:14,0:14:36.09:0,36,520	0/0:12,0:12:30.08:0,30,411	0/0:8,0:8:24.07:0,24,367	0/0:6,0:6:15.04:0,15,220	0/0:4,0:4:11.98:0,12,141	0/0:5,0:5:12.04:0,12,180	0/0:4,0:4:12:0,12,145	0/0:4,0:4:9:0,9,116	0/0:10,0:10:18.86:0,19,333	0/0:14,0:14:39.12:0,39,592	0/0:6,0:6:14.97:0,15,207	0/0:8,0:8:18.05:0,18,260	0/0:3,0:3:9.03:0,9,143	0/0:7,0:7:15.05:0,15,240	0/0:7,0:7:12.01:0,12,163	0/0:5,0:5:8.98:0,9,117	0/0:3,0:3:0.47:0,0,1	0/0:10,0:10:21.03:0,21,310	1/1:3,3:6:12.04:219,12,0	0/0:5,0:5:11.89:0,12,106	0/0:12,0:12:33.09:0,33,480	0/0:3,0:3:9.01:0,9,120
chr10	77154206	.	CTG	C	134.41	PASS	AB=0.990;AC=12;AF=0.250;AN=48;BaseQRankSum=4.423;DP=533;FS=9.328;HRun=0;HaplotypeScore=67.3786;InbreedingCoeff=0.2972;MQ=69.61;MQ0=11;MQRankSum=0.260;QD=1.00;ReadPosRankSum=3.234;VQSLOD=-0.1571;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,3:27:3.01:32,3,0	./.	./.	./.	1/1:18,1:17:8.99:80,9,0	0/0:20,0:20:2.37:0,2,9	0/0:22,0:22:9:0,9,89	./.	1/1:9,4:13:6.02:64,6,0	0/1:18,0:18:1.21:1,0,15	0/0:11,0:10:6.01:0,6,68	0/0:13,0:13:2.98:0,3,22	0/0:15,0:14:9.48:0,9,109	0/0:11,0:11:5.99:0,6,66	0/0:11,0:11:2.99:0,3,23	0/0:12,0:12:5.49:0,5,34	0/0:29,0:29:7.95:0,8,139	0/1:22,0:23:4.57:5,0,54	0/1:11,0:11:14.02:14,0,25	0/1:11,0:11:14.17:14,0,35	0/0:46,0:45:14.83:0,15,106	0/0:15,0:15:11.95:0,12,110	0/0:14,0:14:12.60:0,13,107	0/0:39,0:38:8.95:0,9,67	1/1:12,1:13:6.01:59,6,0	0/0:22,0:22:32.72:0,33,282	0/0:9,0:9:2.99:0,3,23	0/0:16,0:16:8.99:0,9,91
chr10	77154444	.	G	GT	344.06	PASS	AB=0.945;AC=9;AF=0.161;AN=56;BaseQRankSum=-1.041;DP=498;FS=3.248;HRun=14;HaplotypeScore=74.6163;InbreedingCoeff=0.2870;MQ=74.07;MQ0=1;MQRankSum=-0.868;QD=2.48;ReadPosRankSum=-1.252;VQSLOD=-0.3822;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:40.84:0,41,266	0/0:8,0:8:20.69:0,21,134	0/1:28,0:20:3.21:3,0,15	0/0:14,0:9:1.25:0,1,19	1/1:7,12:21:19.32:258,19,0	0/0:16,1:18:2.16:0,2,133	0/0:14,1:17:13:0,13,189	0/1:24,1:28:12.87:13,0,147	0/1:10,1:13:9.65:10,0,66	0/0:10,0:12:17.06:0,17,93	0/0:12,0:12:17.32:0,17,114	0/1:16,2:20:10.23:10,0,180	0/0:18,2:20:17.58:0,18,231	0/0:20,0:20:40.34:0,40,253	0/0:17,1:19:14.10:0,14,209	0/0:17,0:18:40.41:0,40,255	0/0:17,0:20:28.50:0,28,179	0/0:16,0:16:25.77:0,26,172	0/0:23,1:23:26.76:0,27,298	0/0:10,0:11:25.64:0,26,158	0/0:19,0:19:34.40:0,34,213	0/0:14,2:16:5.65:0,6,155	0/1:11,1:12:2.68:3,0,111	0/0:19,0:21:39.46:0,39,242	1/1:6,10:16:21:185,21,0	0/0:12,2:15:0.84:0,1,118	0/0:16,1:18:17.04:0,17,229	0/0:11,0:12:19.63:0,20,121
chr10	77158674	.	A	AC	1200.87	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.073;DP=690;FS=0.000;HRun=2;HaplotypeScore=69.4973;InbreedingCoeff=0.9988;MQ=86.85;MQ0=0;MQRankSum=-4.150;QD=35.32;ReadPosRankSum=0.893;VQSLOD=4.0091;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:34:90.30:1296,90,0	0/0:10,0:10:27.08:0,27,331	0/0:25,0:25:72.19:0,72,858	0/0:21,0:21:54:0,54,613	0/0:17,0:17:48.14:0,48,583	0/0:24,0:24:69.22:0,69,855	0/0:20,0:20:54.17:0,54,669	0/0:24,0:24:66.21:0,66,818	0/0:21,0:21:63.20:0,63,781	0/0:25,0:25:75.19:0,75,907	0/0:14,0:14:42.08:0,42,489	0/0:30,0:30:87.27:0,87,1078	0/0:18,0:18:54.17:0,54,668	0/0:30,0:30:90.27:0,90,1102	0/0:25,0:25:75.24:0,75,930	0/0:26,0:26:72.18:0,72,875	0/0:36,0:36:99:0,105,1300	0/0:35,0:35:99:0,105,1302	0/0:17,0:17:48.15:0,48,594	0/0:23,0:23:66.21:0,66,817	0/0:53,0:53:99:0,156,1914	0/0:28,0:28:78.24:0,78,966	0/0:17,0:17:42.12:0,42,505	0/0:45,0:45:99:0,129,1599	0/0:12,0:12:36.11:0,36,445	0/0:20,0:20:51.16:0,51,629	0/0:24,0:24:60.19:0,60,743	0/0:16,0:16:48.12:0,48,568
chr10	77159719	.	A	AG	1489.66	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.240;DP=684;FS=0.000;HRun=6;HaplotypeScore=66.2715;InbreedingCoeff=0.9654;MQ=93.86;MQ0=0;MQRankSum=-3.587;QD=29.21;ReadPosRankSum=1.432;VQSLOD=4.2636;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,46:51:99:1585,126,0	0/0:9,0:9:27.05:0,27,270	0/0:25,0:25:54.08:0,54,603	0/0:38,0:38:61.82:0,62,724	0/0:29,0:29:75.14:0,75,751	0/0:23,0:23:59.84:0,60,580	0/0:17,0:17:48.10:0,48,483	0/0:23,0:23:51.05:0,51,498	0/0:25,0:25:75.14:0,75,752	0/0:21,0:21:60.13:0,60,608	0/0:25,0:25:72.12:0,72,716	0/0:30,0:30:72.10:0,72,712	0/0:25,0:25:75.16:0,75,760	0/0:27,0:27:78.06:0,78,774	0/0:23,0:23:63.13:0,63,637	0/0:20,0:20:57.11:0,57,570	0/0:38,0:38:99:0,108,1101	0/0:21,0:21:57.10:0,57,572	0/0:26,0:26:60.09:0,60,598	0/0:23,0:23:66.15:0,66,671	0/0:33,0:33:87.20:0,87,887	0/0:21,0:21:42.08:0,42,424	0/0:18,0:18:48.08:0,48,478	0/0:36,0:36:90.09:0,90,884	0/0:19,0:19:57.13:0,57,578	0/0:24,0:24:62.72:0,63,615	0/0:10,0:10:21.05:0,21,214	0/0:4,0:4:12.03:0,12,122
chr10	77159791	.	CTG	C	493.60	PASS	AB=0.926;AC=20;AF=0.385;AN=52;BaseQRankSum=3.135;DP=571;FS=7.690;HRun=0;HaplotypeScore=77.3147;InbreedingCoeff=-0.5298;MQ=62.20;MQ0=9;MQRankSum=1.238;QD=1.39;ReadPosRankSum=3.362;VQSLOD=0.2377;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:26.66:27,0,113	0/0:9,0:9:6.02:0,6,89	./.	./.	0/1:14,0:17:18.23:18,0,97	0/1:17,1:18:17.49:17,0,163	0/1:15,1:17:25.71:26,0,194	0/0:23,0:23:1.25:0,1,3	0/1:12,2:14:26.60:27,0,39	0/1:16,1:17:13.92:27,0,14	0/1:11,2:13:20.60:21,0,100	0/1:38,1:39:19.25:19,0,490	0/1:22,0:22:11.26:11,0,219	0/1:21,0:21:35.81:36,0,191	0/1:16,3:19:23.88:24,0,59	0/1:9,1:8:23.62:24,0,59	0/1:26,1:27:71.26:71,0,203	0/0:23,0:23:2.22:0,2,196	0/0:21,0:18:2.99:0,3,24	0/1:14,2:16:51.53:74,0,52	0/0:57,0:56:13.98:0,14,457	0/0:12,0:12:11.40:0,11,142	1/1:11,3:14:9.02:98,9,0	0/1:18,6:24:38.14:38,0,280	0/0:21,0:20:11.97:0,12,62	0/1:13,0:12:26.19:26,0,31	0/1:11,0:11:30.94:38,0,31	0/1:7,2:8:20.58:21,0,119
chr10	77160872	.	C	CGA	1280.91	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.224;DP=770;FS=3.405;HRun=0;HaplotypeScore=106.7561;InbreedingCoeff=0.9010;MQ=79.38;MQ0=5;MQRankSum=0.317;QD=27.25;ReadPosRankSum=0.911;VQSLOD=5.1221;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:44:93.02:0,93,1093	0/0:14,0:14:39.12:0,39,487	0/0:56,0:39:61.09:0,61,673	0/0:72,0:54:17.16:0,17,528	1/1:4,22:25:13.67:755,14,0	0/0:18,0:18:48.15:0,48,588	0/0:33,0:33:77.03:0,77,853	0/0:20,0:20:45.14:0,45,561	0/0:28,0:28:81.23:0,81,978	0/0:24,0:24:60.19:0,60,747	0/0:17,0:17:42.13:0,42,514	0/0:19,0:19:42.08:0,42,504	0/0:21,0:21:51.16:0,51,635	0/0:21,0:21:57.17:0,57,694	0/0:31,0:32:78.08:0,78,944	0/0:25,0:25:69.20:0,69,843	0/0:33,0:33:81.25:0,81,1006	0/0:21,0:21:54.17:0,54,672	0/0:19,0:19:38.56:0,39,458	0/0:29,0:29:69.21:0,69,849	0/0:34,0:36:83.88:0,84,980	0/0:34,0:35:87.09:0,87,1046	0/0:21,0:20:48.15:0,48,599	0/0:28,0:29:78.04:0,78,932	1/1:4,17:21:39.13:644,39,0	0/0:26,0:27:63.01:0,63,740	0/0:26,0:26:63.18:0,63,766	0/0:2,0:2:3.01:0,3,38
chr10	77160983	.	AGT	A	1941.45	PASS	AB=0.874;AC=34;AF=0.680;AN=50;BaseQRankSum=4.117;DP=585;FS=0.708;HRun=0;HaplotypeScore=78.3982;InbreedingCoeff=0.0782;MQ=68.27;MQ0=9;MQRankSum=-0.127;QD=4.66;ReadPosRankSum=-0.831;VQSLOD=2.0992;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:34:5.69:0,6,69	1/1:6,3:8:6.65:105,7,0	./.	./.	0/0:18,0:16:3:0,3,26	1/1:11,3:15:7.09:50,7,0	1/1:23,13:37:41.38:389,41,0	./.	0/1:20,1:21:17.90:18,0,165	1/1:24,1:26:11.70:94,12,0	1/1:6,0:7:5.68:28,6,0	0/1:21,1:21:5.87:6,0,316	0/1:15,1:15:23.81:24,0,80	1/1:11,3:16:14.71:127,15,0	1/1:10,5:18:17.36:141,17,0	1/1:7,6:13:2.80:31,3,0	1/1:19,4:28:5.52:405,6,0	0/1:11,6:16:35.94:57,0,36	1/1:9,2:11:6.02:66,6,0	1/1:9,2:11:6.02:66,6,0	0/1:24,20:45:21.06:188,0,21	0/1:12,0:13:8.13:8,0,39	0/0:16,1:17:9.01:0,9,114	0/1:29,2:31:20.81:21,0,484	0/0:19,0:18:6.01:0,6,71	0/1:19,4:22:31.41:115,0,31	1/1:18,5:23:13.28:134,13,0	1/1:11,0:11:2.98:22,3,0
chr10	77161947	.	AT	A	1996.04	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.249;DP=566;FS=8.092;HRun=7;HaplotypeScore=57.9388;InbreedingCoeff=0.9953;MQ=70.76;MQ0=1;MQRankSum=0.459;QD=25.59;ReadPosRankSum=1.432;VQSLOD=4.1490;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:23:57.13:579,57,0	0/0:14,0:14:39.12:0,39,490	0/0:18,0:16:23.33:0,23,277	0/0:19,0:15:20.79:0,21,249	1/1:3,28:31:81.18:826,81,0	0/0:24,0:24:54.15:0,54,657	0/0:14,0:14:39.08:0,39,473	0/0:33,0:33:89.32:0,89,1100	0/0:19,0:19:54.16:0,54,668	0/0:28,0:28:78.23:0,78,959	0/0:22,0:22:60.19:0,60,754	0/0:19,0:19:57.18:0,57,717	0/0:12,0:12:27.97:0,28,342	0/0:19,0:19:54.16:0,54,666	0/0:28,0:28:72.23:0,72,906	0/0:14,0:14:42.12:0,42,515	0/0:28,0:28:61.44:0,61,756	0/0:16,0:16:48.11:0,48,574	0/0:25,0:25:63.20:0,63,792	0/0:29,0:29:81.24:0,81,997	0/0:7,0:7:21.07:0,21,264	0/0:9,0:9:27.09:0,27,340	0/0:19,0:19:57.18:0,57,717	0/0:15,0:15:30.10:0,30,377	1/1:0,24:24:72.16:735,72,0	0/0:18,0:18:51.16:0,51,641	0/0:22,0:22:63.18:0,63,778	0/0:17,0:17:51.16:0,51,641
chr10	77161964	.	A	AT	457.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.109;DP=567;FS=0.887;HRun=8;HaplotypeScore=58.8100;InbreedingCoeff=0.9164;MQ=65.22;MQ0=4;MQRankSum=-3.110;QD=16.94;ReadPosRankSum=-1.876;VQSLOD=3.2189;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,21:27:48.14:552,48,0	0/0:15,0:15:36.02:0,36,329	0/0:17,0:13:17.19:0,17,160	0/0:19,0:13:14.03:0,14,144	0/0:29,0:29:75.02:0,75,682	0/0:23,0:23:54.01:0,54,489	0/0:16,0:16:39.01:0,39,357	0/0:31,0:31:68.95:0,69,616	0/0:20,0:20:56.99:0,57,508	0/0:28,0:28:75.04:0,75,686	0/0:22,0:22:57.02:0,57,521	0/0:16,0:16:39.02:0,39,357	0/0:14,0:14:36.01:0,36,329	0/0:17,0:17:48.01:0,48,434	0/0:24,0:24:63.02:0,63,573	0/0:15,0:15:36.02:0,36,330	0/0:32,0:31:74.99:0,75,677	0/0:20,0:20:54.03:0,54,494	0/0:26,0:25:66.01:0,66,595	0/0:24,0:24:69.03:0,69,629	0/0:4,0:4:9:0,9,82	0/0:12,0:12:24.01:0,24,220	0/0:20,0:20:42.01:0,42,384	0/0:15,0:15:36.01:0,36,325	0/0:25,0:25:69.02:0,69,629	0/0:13,0:13:36.01:0,36,326	0/0:25,0:24:31.54:0,32,465	0/0:18,0:18:54.01:0,54,488
chr10	77162176	.	A	AT	1306.66	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.972;DP=621;FS=1.809;HRun=9;HaplotypeScore=64.4750;InbreedingCoeff=0.8158;MQ=70.09;MQ0=0;MQRankSum=-1.808;QD=22.53;ReadPosRankSum=-0.228;VQSLOD=4.3478;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,49:58:66.18:1401,66,0	0/0:14,0:14:32.97:0,33,283	0/0:16,0:14:6.44:0,6,164	0/0:21,0:20:5.06:0,5,169	0/0:26,0:26:71.97:0,72,621	0/0:26,0:26:62.96:0,63,543	0/0:25,0:25:39.50:0,39,497	0/0:21,0:21:44.96:0,45,387	0/0:12,0:12:35.99:0,36,313	0/0:32,0:32:68.23:0,68,704	0/0:22,0:22:59.98:0,60,521	0/0:19,0:19:44.98:0,45,391	0/0:22,0:22:59.97:0,60,517	0/0:24,0:24:68.99:0,69,599	0/0:27,0:27:68.94:0,69,592	0/0:26,0:26:68.97:0,69,596	0/0:21,0:21:56.99:0,57,495	0/0:21,0:21:59.99:0,60,521	0/0:30,0:31:70.97:0,71,599	0/0:23,0:23:52.08:0,52,510	0/0:19,0:19:50.96:0,51,438	0/0:9,0:9:26.99:0,27,234	0/0:13,0:13:32.98:0,33,287	0/0:12,0:12:32.99:0,33,287	0/0:19,0:19:47.96:0,48,414	0/0:18,0:18:53.99:0,54,469	0/0:21,1:23:28.84:0,29,468	0/0:20,0:20:59.99:0,60,521
chr10	77162543	.	A	AAG	2338	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.417;DP=699;FS=2.004;HRun=0;HaplotypeScore=83.7275;InbreedingCoeff=0.9984;MQ=82.47;MQ0=0;MQRankSum=-5.900;QD=55.67;ReadPosRankSum=0.517;VQSLOD=3.9870;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:42:99:2433,120,0	0/0:9,0:9:27.08:0,27,418	0/0:22,0:22:56.96:0,57,770	0/0:21,0:21:40.31:0,40,731	0/0:24,0:24:72.24:0,72,1143	0/0:22,0:22:63.21:0,63,1027	0/0:31,0:31:93.31:0,93,1486	0/0:38,0:38:99:0,114,1747	0/0:31,0:31:93.29:0,93,1453	0/0:28,0:28:81.27:0,81,1301	0/0:20,0:20:57.19:0,57,929	0/0:25,0:25:75.25:0,75,1200	0/0:23,0:23:63.21:0,63,1017	0/0:15,0:15:45.14:0,45,703	0/0:36,0:36:99:0,108,1737	0/0:27,0:27:81.27:0,81,1295	0/0:33,0:33:99:0,99,1589	0/0:17,0:16:51.15:0,51,798	0/0:22,0:22:63.21:0,63,1001	0/0:17,0:17:51.11:0,51,776	0/0:44,0:44:99:0,129,2046	0/0:31,0:31:93.27:0,93,1463	0/0:17,0:17:51.15:0,51,762	0/0:35,0:35:99:0,105,1677	0/0:18,0:18:51.17:0,51,831	0/0:21,0:21:60.18:0,60,902	0/0:20,0:20:60.20:0,60,951	0/0:10,0:10:30.10:0,30,486
chr10	77164021	.	GA	G	723.23	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=0.958;DP=494;FS=7.141;HRun=9;HaplotypeScore=95.2329;InbreedingCoeff=0.9145;MQ=42.14;MQ0=25;MQRankSum=-3.025;QD=11.13;ReadPosRankSum=2.946;VQSLOD=2.7387;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,18:27:38.96:346,39,0	0/0:8,0:8:12.51:0,13,137	./.	./.	1/1:11,10:20:20.98:192,21,0	0/0:11,0:11:24.07:0,24,277	0/0:24,0:24:48.02:0,48,494	0/0:16,0:15:30.06:0,30,331	0/0:14,0:12:27.04:0,27,282	0/0:25,0:25:57.04:0,57,602	0/0:15,0:15:27:0,27,284	0/0:28,0:27:53.46:0,53,529	0/0:15,0:15:24.40:0,24,221	0/0:23,0:22:37.22:0,37,341	0/0:23,0:22:47.96:0,48,498	0/0:17,0:17:33.03:0,33,352	0/0:28,0:25:47.68:0,48,449	0/0:28,0:28:51.45:0,51,519	0/0:16,0:14:33.90:0,34,335	0/0:18,0:17:35.12:0,35,320	0/0:15,1:14:18.05:0,18,203	0/0:16,0:15:21.06:0,21,240	0/0:19,2:20:2.66:0,3,275	0/0:17,0:12:18.03:0,18,188	1/1:4,10:14:36:325,36,0	0/0:17,0:15:24.03:0,24,262	0/0:17,0:16:19.59:0,20,341	0/0:13,0:12:24.07:0,24,277
chr10	77164051	.	A	AAAG	280.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.880;DP=577;FS=9.187;HRun=0;HaplotypeScore=133.7493;InbreedingCoeff=0.5332;MQ=59.21;MQ0=8;MQRankSum=-6.591;QD=9.66;ReadPosRankSum=-3.417;VQSLOD=2.0639;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,8:28:1.67:356,2,0	0/0:10,0:10:10.70:0,11,220	0/0:18,0:13:8.79:0,9,189	0/0:12,0:4:11.89:0,12,102	0/0:29,0:29:50.11:0,50,407	0/0:14,0:14:32.82:0,33,297	0/0:24,0:24:43.73:0,44,440	0/0:28,0:28:66.05:0,66,543	0/0:18,0:17:30.44:0,30,331	0/0:31,0:31:27.96:0,28,343	0/0:13,0:13:21.18:0,21,270	0/0:22,0:22:37.19:0,37,328	0/0:18,0:18:40.71:0,41,375	0/0:18,0:18:36.64:0,37,329	0/0:20,0:19:26.04:0,26,311	0/0:18,0:18:30.37:0,30,321	0/0:32,0:30:65.96:0,66,584	0/0:22,0:21:34:0,34,345	0/0:26,0:26:5.67:0,6,386	0/0:24,0:24:48.64:0,49,426	0/0:13,0:12:13.73:0,14,161	0/0:18,0:18:46.23:0,46,400	0/0:27,0:27:14.98:0,15,355	0/0:17,0:12:27:0,27,302	0/0:22,0:22:49.89:0,50,413	0/0:20,0:19:24.51:0,25,325	0/0:20,0:19:27.03:0,27,292	0/0:14,0:13:29.41:0,29,280
chr10	77165382	.	T	TTTGA	1534.26	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.911;DP=693;FS=0.781;HRun=0;HaplotypeScore=107.9263;InbreedingCoeff=0.9828;MQ=80.90;MQ0=0;MQRankSum=-0.320;QD=39.34;ReadPosRankSum=2.118;VQSLOD=3.8788;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,24:39:66.23:1629,66,0	0/0:9,0:9:15.05:0,15,251	0/0:34,0:32:28.39:0,28,754	0/0:24,0:22:28.22:0,28,487	0/0:31,0:31:72.23:0,72,1169	0/0:27,0:27:60.19:0,60,965	0/0:21,0:21:57.18:0,57,928	0/0:37,0:37:72.24:0,72,1169	0/0:28,0:28:54.18:0,54,902	0/0:26,0:26:63.20:0,63,1006	0/0:21,0:21:57.19:0,57,945	0/0:19,0:19:57.19:0,57,951	0/0:19,0:19:39.13:0,39,637	0/0:18,0:18:51.17:0,51,839	0/0:28,0:28:72.22:0,72,1145	0/0:31,0:31:75.26:0,75,1249	0/0:30,0:30:75.26:0,75,1241	0/0:14,0:14:42.14:0,42,698	0/0:21,0:21:39.11:0,39,587	0/0:21,0:21:42.14:0,42,702	0/0:35,0:35:93.32:0,93,1549	0/0:27,0:27:66.21:0,66,1075	0/0:25,0:25:54.18:0,54,885	0/0:19,0:19:51.17:0,51,839	0/0:22,0:22:48.16:0,48,772	0/0:23,0:23:66.23:0,66,1098	0/0:24,0:24:54.18:0,54,903	0/0:20,0:20:48.16:0,48,803
chr10	77165767	.	ATATGTATG	A	83.51	PASS	AB=0.955;AC=3;AF=0.054;AN=56;BaseQRankSum=2.808;DP=810;FS=2.159;HRun=0;HaplotypeScore=197.7690;InbreedingCoeff=0.4301;MQ=59.00;MQ0=7;MQRankSum=-2.892;QD=1.61;ReadPosRankSum=-1.883;VQSLOD=2.5020;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,15:31:5.89:138,6,0	0/0:7,0:7:12.04:0,12,343	0/0:21,0:13:5.75:0,6,43	0/0:28,0:14:3.01:0,3,30	0/0:33,0:33:57.20:0,57,2002	0/0:25,0:26:66.20:0,66,2260	0/0:26,0:26:51.16:0,51,1727	0/0:45,0:44:39.13:0,39,996	0/0:35,0:35:90.31:0,90,3140	0/0:52,0:51:96.33:0,96,3449	0/0:12,0:12:18.06:0,18,740	0/0:38,0:39:79.47:0,79,2970	0/0:39,0:39:72.17:0,72,2361	0/0:36,0:36:69.21:0,69,2286	0/0:49,0:49:99:0,105,3941	0/0:35,0:35:60.21:0,60,2270	0/0:29,0:30:51.16:0,51,1768	0/0:23,0:23:48.11:0,48,1337	0/0:23,0:23:36.09:0,36,1115	0/1:20,1:21:39.29:39,0,1043	0/0:40,0:40:84.25:0,84,2998	0/0:19,0:19:24.08:0,24,832	0/0:23,0:23:36.09:0,36,1227	0/0:17,0:19:24.06:0,24,723	0/0:25,0:25:42.14:0,42,1623	0/0:29,0:29:69.23:0,69,2419	0/0:19,0:19:45.15:0,45,1498	0/0:22,0:21:33.09:0,33,1107
chr10	77166573	.	T	TTTTTG	2235.87	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.389;DP=584;FS=6.699;HRun=0;HaplotypeScore=115.2538;InbreedingCoeff=0.9620;MQ=66.55;MQ0=2;MQRankSum=-7.483;QD=26.94;ReadPosRankSum=-0.926;VQSLOD=2.9661;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,1:42:36.12:672,36,0	0/0:4,0:4:9.03:0,9,174	0/0:32,0:21:29.56:0,30,433	0/0:30,0:14:14.20:0,14,137	1/1:16,8:24:48.09:1098,48,0	0/0:20,0:20:48.16:0,48,872	0/0:19,0:19:48.16:0,48,889	0/0:26,0:26:54.12:0,54,889	0/0:19,0:19:51.14:0,51,860	0/0:18,0:18:51.17:0,51,946	0/0:19,0:19:45.09:0,45,779	0/0:16,0:16:36.09:0,36,569	0/0:10,0:10:15.04:0,15,256	0/0:17,0:17:39.11:0,39,671	0/0:11,0:11:27.09:0,27,501	0/0:22,0:22:54.15:0,54,903	0/0:37,0:37:84.78:0,85,1354	0/0:12,0:12:23.89:0,24,337	0/0:26,0:26:57.14:0,57,960	0/0:21,0:21:45.14:0,45,783	0/0:24,0:23:48.14:0,48,805	0/0:17,0:17:42.13:0,42,764	0/0:16,0:16:45.15:0,45,846	0/0:22,0:22:48.14:0,48,835	1/1:4,13:17:21.07:607,21,0	0/0:24,0:23:54.18:0,54,986	0/0:31,0:31:68.91:0,69,1239	0/0:7,0:7:18.06:0,18,322
chr10	77167037	.	T	TAAC	84.16	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=3.890;DP=346;FS=10.265;HRun=0;HaplotypeScore=52.1420;InbreedingCoeff=0.5561;MQ=68.42;MQ0=4;MQRankSum=-2.710;QD=3.83;ReadPosRankSum=-0.572;VQSLOD=0.0164;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,5:13:14.38:171,14,0	0/0:10,0:10:27.04:0,27,321	0/1:9,0:8:5.03:5,0,118	0/0:17,0:15:35.88:0,36,368	0/0:11,0:11:27.07:0,27,377	0/0:19,0:19:42.09:0,42,559	0/0:4,0:4:9:0,9,108	0/0:33,0:33:84.17:0,84,1010	0/0:16,0:16:42.06:0,42,572	0/0:12,0:12:33.08:0,33,417	0/0:6,0:6:18.05:0,18,246	0/0:6,0:6:15.02:0,15,182	0/0:5,0:5:9.02:0,9,113	0/0:15,0:15:36:0,36,445	0/0:10,0:10:27.03:0,27,319	0/0:12,0:12:33.03:0,33,386	0/0:22,0:22:54.11:0,54,712	0/0:14,0:14:42.08:0,42,570	0/0:23,0:19:30.08:0,30,401	0/0:6,0:6:15:0,15,161	0/0:13,0:13:30.01:0,30,356	0/0:5,0:5:12.01:0,12,138	0/0:6,0:6:18.03:0,18,225	0/0:3,0:3:6:0,6,68	0/0:10,0:10:27.06:0,27,358	0/0:14,0:14:36.04:0,36,453	0/0:15,0:15:33.06:0,33,424	0/0:17,0:17:36.09:0,36,490
chr10	77176098	.	G	GCATC	1512.83	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.568;DP=672;FS=5.924;HRun=0;HaplotypeScore=116.0985;InbreedingCoeff=0.9965;MQ=76.43;MQ0=0;MQRankSum=-4.419;QD=54.03;ReadPosRankSum=-0.828;VQSLOD=4.7087;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,22:28:59.98:1608,60,0	0/0:11,0:11:33.11:0,33,692	0/0:12,0:12:24.08:0,24,455	0/0:21,0:21:48.58:0,49,848	0/0:12,0:12:36.12:0,36,723	0/0:13,0:13:39.12:0,39,764	0/0:34,0:34:99:0,102,2129	0/0:22,0:22:66.20:0,66,1332	0/0:34,0:34:99:0,102,2099	0/0:21,0:21:60.17:0,60,1142	0/0:13,0:13:33.10:0,33,650	0/0:33,0:33:93.29:0,93,1853	0/0:27,0:27:81.28:0,81,1691	0/0:29,0:29:87.28:0,87,1765	0/0:24,0:24:72.25:0,72,1481	0/0:22,0:22:63.22:0,63,1317	0/0:35,0:35:99:0,105,2118	0/0:34,0:34:99:0,99,1944	0/0:20,0:20:60.21:0,60,1236	0/0:19,0:19:48.11:0,48,921	0/0:66,0:66:99:0,196,4020	0/0:12,0:12:33.11:0,33,687	0/0:12,0:12:30.06:0,30,582	0/0:36,0:36:99:0,102,2139	0/0:24,0:24:69.22:0,69,1401	0/0:23,0:23:66.70:0,67,1370	0/0:21,0:21:63.19:0,63,1237	0/0:14,0:14:42.14:0,42,881
chr10	77176353	.	AG	A	1777.86	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=10.183;DP=647;FS=0.469;HRun=8;HaplotypeScore=67.0979;InbreedingCoeff=0.9061;MQ=77.39;MQ0=0;MQRankSum=-3.075;QD=18.91;ReadPosRankSum=1.562;VQSLOD=3.5057;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:72.11:695,72,0	0/0:14,0:14:39.07:0,39,431	0/0:19,0:19:38.14:0,38,428	0/1:11,0:10:0.71:1,0,238	1/1:3,25:28:75.02:704,75,0	0/0:14,0:15:38.95:0,39,448	0/0:17,0:17:45.10:0,45,508	0/0:29,0:29:66.13:0,66,749	0/0:15,0:15:36.11:0,36,433	0/0:35,0:35:93.25:0,93,1077	0/0:18,0:18:54.15:0,54,637	0/0:18,0:18:48.12:0,48,551	0/0:20,0:20:60.11:0,60,663	0/0:21,0:21:60.18:0,60,722	0/0:28,0:28:69.17:0,69,788	0/0:26,0:26:69.19:0,69,817	0/0:32,0:32:87.23:0,87,1022	0/0:14,0:14:36.08:0,36,409	0/0:24,0:24:45.12:0,45,523	0/0:31,0:31:78.22:0,78,920	0/0:20,0:20:51.13:0,51,591	0/0:21,0:21:54.14:0,54,626	0/0:22,0:22:54.15:0,54,637	0/0:32,0:32:81.23:0,81,962	1/1:4,19:23:54.08:521,54,0	0/0:34,0:34:87.23:0,87,1015	0/0:38,0:38:99:0,111,1299	0/0:10,0:10:30.06:0,30,337
chr10	77180273	.	CCT	C	415.42	PASS	AB=0.634;AC=1;AF=0.018;AN=56;BaseQRankSum=5.268;DP=516;FS=0.000;HRun=0;HaplotypeScore=56.5043;InbreedingCoeff=-0.0327;MQ=52.00;MQ0=99;MQRankSum=-0.179;QD=15.98;ReadPosRankSum=0.933;VQSLOD=3.3709;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,15:21:59.69:490,0,60	0/0:5,0:5:9.03:0,9,162	0/0:21,0:12:18.05:0,18,297	0/0:19,0:12:21.93:0,22,338	0/0:8,0:7:18.06:0,18,315	0/0:12,0:10:21.07:0,21,378	0/0:22,0:16:34.36:0,34,634	0/0:22,0:11:24.08:0,24,423	0/0:25,0:14:36.12:0,36,648	0/0:14,0:8:15.05:0,15,270	0/0:6,0:4:6.02:0,6,108	0/0:17,0:15:30.06:0,30,679	0/0:17,0:16:45.15:0,45,788	0/0:22,0:21:63.20:0,63,1105	0/0:20,0:20:60.21:0,60,1080	0/0:24,0:21:57.20:0,57,1026	0/0:19,0:19:39.13:0,39,702	0/0:20,0:19:51.13:0,51,884	0/0:25,0:12:24.07:0,24,397	0/0:11,0:8:21.07:0,21,368	0/0:32,0:28:66.59:0,67,1173	0/0:10,0:8:15.05:0,15,270	0/0:18,0:11:30.09:0,30,510	0/0:32,0:30:84.29:0,84,1499	0/0:9,0:1:3.01:0,3,54	0/0:27,0:19:57.18:0,57,988	0/0:23,0:22:58.08:0,58,997	0/0:10,0:8:24.08:0,24,432
chr10	77180577	.	T	TGA	847.05	PASS	AB=0.925;AC=32;AF=0.667;AN=48;BaseQRankSum=-0.642;DP=564;FS=37.846;HRun=0;HaplotypeScore=75.3079;InbreedingCoeff=0.0746;MQ=71.65;MQ0=10;MQRankSum=-0.141;QD=2.14;ReadPosRankSum=-0.277;VQSLOD=0.0380;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:7.15:66,7,0	1/1:6,0:6:5.99:49,6,0	./.	0/0:50,0:18:0:0,0,0	./.	0/1:17,0:17:7.14:7,0,8	1/1:14,8:21:3.01:44,3,0	1/1:24,0:24:2.88:15,3,0	0/0:23,0:23:17.75:0,18,153	1/1:18,0:18:4.86:30,5,0	./.	0/0:19,0:19:5.59:0,6,26	0/1:23,0:23:12.32:12,0,32	1/1:28,0:27:21.02:226,21,0	1/1:10,0:17:5.95:45,6,0	0/1:10,3:13:31.75:32,0,83	1/1:23,0:23:9.68:100,10,0	0/1:8,10:19:22.33:80,0,22	1/1:17,0:16:5.88:37,6,0	1/1:10,0:9:5.98:47,6,0	0/1:14,0:14:16.10:39,0,16	1/1:19,0:19:6.06:35,6,0	0/0:15,0:16:5.52:0,6,25	0/1:36,0:37:12.76:13,0,151	0/1:19,0:19:0:0,0,0	1/1:24,0:23:3.93:73,4,0	0/1:20,1:20:35.31:35,0,86	./.
chr10	77181944	.	TACGAAA	T	656.19	PASS	AB=0.606;AC=2;AF=0.036;AN=56;BaseQRankSum=6.608;DP=815;FS=22.737;HRun=0;HaplotypeScore=180.8322;InbreedingCoeff=-0.0370;MQ=88.08;MQ0=0;MQRankSum=-6.062;QD=23.44;ReadPosRankSum=0.274;VQSLOD=1.9427;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,182,4728	0/0:10,0:10:30.09:0,30,1023	0/0:27,0:26:77.70:0,78,2366	0/0:33,0:33:93.82:0,94,3037	0/1:5,5:10:30:30,0,95	0/0:16,0:16:48.12:0,48,1626	0/0:42,0:42:99:0,126,4393	0/0:25,0:25:75.24:0,75,2611	0/0:34,0:34:99:0,102,3636	0/0:38,0:38:99:0,111,3957	0/0:13,0:13:39.13:0,39,1410	0/0:37,0:37:99:0,111,3967	0/0:33,0:33:99:0,99,3398	0/0:25,0:25:75.24:0,75,2663	0/0:43,0:43:99:0,129,4531	0/0:23,0:23:69.21:0,69,2406	0/0:30,0:30:90.31:0,90,3309	0/0:31,0:31:93.28:0,93,3312	0/0:23,0:23:63.17:0,63,1893	0/0:10,0:10:30.09:0,30,1041	0/0:88,0:88:99:0,265,9097	0/0:22,0:22:66.23:0,66,2380	0/0:24,0:24:69.21:0,69,2236	0/0:30,0:30:90.30:0,90,3239	0/1:3,15:18:43.88:715,0,44	0/0:35,0:35:99:0,105,3761	0/0:22,0:22:66.23:0,66,2420	0/0:10,0:10:30.10:0,30,1063
chr10	77181952	.	CGACGAGG	C	759.14	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.055;DP=809;FS=16.181;HRun=0;HaplotypeScore=195.5109;InbreedingCoeff=0.9703;MQ=87.20;MQ0=0;MQRankSum=-6.521;QD=34.51;ReadPosRankSum=0.315;VQSLOD=1.8914;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,181,7272	0/0:9,0:9:27.09:0,27,1132	0/0:27,0:27:78.23:0,78,2688	0/0:28,0:28:81.25:0,81,2631	1/1:1,5:6:9.37:77,9,0	0/0:15,0:15:45.15:0,45,1811	0/0:43,0:43:99:0,126,5085	0/0:31,0:31:93.31:0,93,3704	0/0:34,0:34:99:0,102,4026	0/0:34,0:34:99:0,102,3959	0/0:13,0:13:39.13:0,39,1616	0/0:36,0:36:99:0,108,4401	0/0:33,0:33:96.33:0,96,3858	0/0:30,0:30:81.26:0,81,3154	0/0:41,0:41:99:0,117,4785	0/0:27,0:27:81.28:0,81,3297	0/0:29,0:29:87.30:0,87,3573	0/0:32,0:32:96.33:0,96,3708	0/0:21,0:21:63.22:0,63,2423	0/0:14,0:14:42.14:0,42,1716	0/0:88,0:88:99:0,262,10403	0/0:23,0:23:69.24:0,69,2738	0/0:21,0:21:57.20:0,57,2343	0/0:27,0:27:81.28:0,81,3191	1/1:1,15:16:42.14:796,42,0	0/0:38,0:38:99:0,114,4300	0/0:23,0:23:69.24:0,69,2812	0/0:9,0:9:27.09:0,27,1132
chr10	77182836	.	A	AT	4397.11	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.255;DP=804;FS=21.310;HRun=0;HaplotypeScore=81.4275;InbreedingCoeff=0.9985;MQ=86.50;MQ0=0;MQRankSum=-3.056;QD=40.34;ReadPosRankSum=2.902;VQSLOD=3.0884;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,44:46:99:1918,120,0	0/0:16,0:16:48.15:0,48,653	0/0:31,0:31:87.23:0,87,1152	0/0:25,0:25:69.11:0,69,905	1/1:1,27:28:69.24:1099,69,0	0/0:24,0:24:69.23:0,69,965	0/0:37,0:37:99:0,102,1407	0/0:26,0:26:78.25:0,78,1062	0/0:35,0:35:99:0,102,1426	0/0:37,0:37:99:0,105,1469	0/0:7,0:7:21.07:0,21,294	0/0:28,0:28:84.28:0,84,1175	0/0:25,0:25:75.25:0,75,1048	0/0:24,0:24:69.23:0,69,963	0/0:26,0:25:78.26:0,78,1091	0/0:23,0:23:63.21:0,63,881	0/0:19,0:19:57.19:0,57,797	0/0:37,0:37:99:0,111,1515	0/0:24,0:24:72.23:0,72,990	0/0:16,0:16:48.16:0,48,671	0/0:75,0:75:99:0,226,3147	0/0:25,0:25:75.25:0,75,1048	0/0:14,0:14:42.13:0,42,570	0/0:48,0:48:99:0,144,1992	1/1:0,34:35:87.30:1380,87,0	0/0:29,0:29:84.27:0,84,1158	0/0:24,0:24:72.24:0,72,1006	0/0:20,0:20:54.18:0,54,755
chr10	77183222	.	TGGCGGACGTCACCTCGAA	T	1517	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.596;DP=732;FS=4.260;HRun=0;HaplotypeScore=342.2144;InbreedingCoeff=0.8780;MQ=88.00;MQ0=0;MQRankSum=-5.643;QD=42.14;ReadPosRankSum=2.205;VQSLOD=1.9822;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,99,5840	0/0:10,0:10:21.07:0,21,1689	0/0:17,0:17:38.93:0,39,2760	0/0:37,0:37:96.33:0,96,5771	1/1:8,5:13:0.47:1,0,0	0/0:21,0:21:60.21:0,60,4468	0/0:28,0:28:75.26:0,75,4925	0/0:15,0:15:42.14:0,42,2393	0/0:33,0:33:93.32:0,93,6885	0/0:29,0:29:78.09:0,78,3717	0/0:11,0:11:30.07:0,30,1677	0/0:37,0:37:99:0,108,8377	0/0:26,0:26:78.25:0,78,5761	0/0:27,0:27:75.26:0,75,6251	0/0:24,0:24:69.24:0,69,5650	0/0:22,0:22:63.22:0,63,4724	0/0:29,0:29:87.30:0,87,7362	0/0:27,0:27:81.28:0,81,6405	0/0:24,0:24:57.20:0,57,3433	0/0:16,0:16:36.08:0,36,2027	0/0:76,0:76:99:0,208,13074	0/0:22,0:22:57.19:0,57,3610	0/0:13,0:13:36.08:0,36,1930	0/0:45,0:45:99:0,132,10345	1/1:5,18:23:33.11:1611,33,0	0/0:41,0:41:99:0,114,6827	0/0:21,0:21:57.19:0,57,3728	0/0:7,0:7:18.06:0,18,1384
chr10	77183485	.	GA	G	969.83	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.929;DP=640;FS=7.896;HRun=10;HaplotypeScore=83.3095;InbreedingCoeff=0.8024;MQ=83.37;MQ0=0;MQRankSum=-0.909;QD=19.79;ReadPosRankSum=1.330;VQSLOD=4.4068;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:34:42.36:0,42,810	0/0:8,0:8:24.06:0,24,265	0/0:44,1:33:38.88:0,39,513	0/0:35,0:27:15.86:0,16,177	1/1:0,24:24:65.96:570,66,0	0/0:17,0:18:50.95:0,51,528	0/0:21,0:21:63.16:0,63,687	0/0:20,0:20:42.11:0,42,464	0/0:24,0:24:63.14:0,63,678	0/0:26,1:29:45.96:0,46,711	0/0:22,0:23:66.01:0,66,708	0/0:20,0:21:50.97:0,51,545	0/0:15,0:15:36.07:0,36,378	0/0:21,0:21:42.09:0,42,448	0/0:14,0:14:42.07:0,42,439	0/0:12,0:12:33.09:0,33,365	0/0:21,0:21:48.11:0,48,520	0/0:25,0:25:69.17:0,69,754	0/0:24,0:23:56.85:0,57,586	0/0:32,2:34:29.10:0,29,766	0/0:17,1:18:16.94:0,17,435	0/0:16,2:18:2.03:0,2,479	0/0:23,0:24:56.81:0,57,697	0/0:24,1:25:28.53:0,29,657	1/1:3,22:25:59.99:521,60,0	0/0:23,0:24:31.29:0,31,540	0/0:28,0:27:72.14:0,72,769	0/0:8,2:10:1.02:0,1,239
chr10	77184055	.	CACT	C	2610.92	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.990;DP=773;FS=0.000;HRun=0;HaplotypeScore=115.7356;InbreedingCoeff=0.9994;MQ=84.81;MQ0=0;MQRankSum=-2.029;QD=41.44;ReadPosRankSum=1.902;VQSLOD=4.9096;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,181,4348	0/0:9,0:9:27.09:0,27,640	0/0:34,0:34:78.84:0,79,2015	0/0:25,0:24:66.16:0,66,1379	1/1:0,38:38:90.31:1677,90,0	0/0:22,0:22:66.23:0,66,1627	0/0:32,0:32:96.31:0,96,2315	0/0:25,0:25:75.25:0,75,1802	0/0:28,0:28:84.27:0,84,1991	0/0:33,0:33:99:0,99,2398	0/0:22,0:22:66.23:0,66,1613	0/0:32,0:32:96.32:0,96,2291	0/0:38,0:38:99:0,114,2697	0/0:28,0:28:84.27:0,84,2020	0/0:31,0:31:93.31:0,93,2198	0/0:24,0:24:69.24:0,69,1679	0/0:26,0:26:78.27:0,78,1889	0/0:29,0:29:81.26:0,81,1929	0/0:26,0:26:78.27:0,78,1900	0/0:21,0:21:63.22:0,63,1506	0/0:28,0:28:84.29:0,84,2004	0/0:26,0:26:78.27:0,78,1897	0/0:14,0:14:42.14:0,42,1018	0/0:23,0:23:69.24:0,69,1668	1/1:0,25:25:57.20:1056,57,0	0/0:29,0:29:87.30:0,87,2089	0/0:31,0:30:90.27:0,90,2113	0/0:14,0:14:42.14:0,42,1034
chr10	77184688	.	AT	A	811.34	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.653;DP=583;FS=11.284;HRun=8;HaplotypeScore=59.3251;InbreedingCoeff=0.9945;MQ=81.43;MQ0=1;MQRankSum=-2.739;QD=21.35;ReadPosRankSum=1.858;VQSLOD=3.3092;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1292	0/0:13,0:13:39.12:0,39,471	0/0:21,0:20:38.92:0,39,392	0/0:26,0:24:55.99:0,56,585	1/1:0,20:20:56.94:528,57,0	0/0:23,0:23:40.40:0,40,690	0/0:22,0:22:48.15:0,48,580	0/0:28,0:28:72.21:0,72,854	0/0:15,0:15:45.14:0,45,544	0/0:29,0:29:78.22:0,78,923	0/0:20,0:20:54.16:0,54,642	0/0:20,0:20:51.13:0,51,594	0/0:16,0:16:45.14:0,45,543	0/0:25,0:25:60.16:0,60,699	0/0:22,0:22:66.20:0,66,797	0/0:12,0:12:33.10:0,33,399	0/0:17,0:17:45.14:0,45,543	0/0:29,0:29:87.25:0,87,1035	0/0:19,0:19:54.17:0,54,652	0/0:22,0:22:57.17:0,57,689	0/0:21,0:21:57.16:0,57,677	0/0:20,0:20:57.14:0,57,662	0/0:10,0:10:24.07:0,24,280	0/0:23,0:23:60.18:0,60,723	1/1:3,15:18:42.07:405,42,0	0/0:27,0:27:78.22:0,78,929	0/0:21,0:20:54.16:0,54,645	0/0:6,0:6:18.06:0,18,217
chr10	77185493	.	CAG	C	68.03	PASS	AB=0.915;AC=15;AF=0.268;AN=56;BaseQRankSum=4.953;DP=455;FS=5.001;HRun=0;HaplotypeScore=66.8186;InbreedingCoeff=-0.1489;MQ=71.82;MQ0=10;MQRankSum=0.075;QD=0.34;ReadPosRankSum=-1.226;VQSLOD=0.9498;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:16:0.47:1,0,0	0/0:14,0:14:15.05:0,15,239	0/0:41,0:19:32.44:0,32,306	0/0:60,0:29:1.60:0,2,364	1/1:12,0:9:1.36:3,1,0	0/1:7,1:8:23.72:24,0,131	0/0:19,0:19:20.21:0,20,333	0/1:19,2:21:29.41:29,0,511	0/1:14,3:16:49.56:50,0,386	0/1:15,1:16:13.97:14,0,259	0/0:8,0:8:12.04:0,12,187	0/1:14,0:14:14.57:15,0,265	0/1:11,1:12:14.78:15,0,235	0/0:13,0:13:30.10:0,30,464	0/0:12,0:12:14.92:0,15,198	0/0:10,0:10:18.06:0,18,286	0/1:17,1:18:0.84:1,0,447	0/0:15,0:15:24.08:0,24,364	0/0:14,0:14:21.01:0,21,273	0/0:8,0:8:12.04:0,12,191	0/1:21,1:20:12.02:12,0,298	0/1:6,2:8:26.74:27,0,87	0/0:6,0:6:9.03:0,9,139	0/1:14,1:15:2.51:3,0,421	0/0:12,0:11:5.96:0,6,25	0/0:11,0:11:18.06:0,18,284	0/1:18,1:20:10.74:11,0,464	0/0:10,0:10:9.03:0,9,143
chr10	77185691	.	CT	C	1533.85	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.728;DP=654;FS=2.063;HRun=1;HaplotypeScore=62.2282;InbreedingCoeff=0.9999;MQ=72.61;MQ0=0;MQRankSum=-0.935;QD=35.67;ReadPosRankSum=-0.059;VQSLOD=3.5804;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.21:0,69,1078	0/0:15,0:15:45.15:0,45,719	0/0:20,0:18:54.09:0,54,757	0/0:17,0:15:39.01:0,39,588	1/1:0,23:23:69.20:943,69,0	0/0:15,0:15:45.14:0,45,696	0/0:22,0:22:66.22:0,66,1050	0/0:41,0:41:99:0,123,1945	0/0:25,0:25:75.24:0,75,1169	0/0:27,0:27:81.28:0,81,1294	0/0:24,0:24:66.23:0,66,1054	0/0:24,0:24:72.23:0,72,1126	0/0:13,0:13:36.12:0,36,575	0/0:21,0:21:63.21:0,63,1007	0/0:27,0:27:81.25:0,81,1247	0/0:15,0:15:45.15:0,45,718	0/0:30,0:30:90.31:0,90,1434	0/0:18,0:18:54.17:0,54,828	0/0:23,0:23:66.18:0,66,1028	0/0:32,0:32:96.31:0,96,1509	0/0:23,0:23:69.22:0,69,1079	0/0:18,0:18:51.17:0,51,813	0/0:25,0:25:75.26:0,75,1198	0/0:22,0:22:66.23:0,66,1053	1/1:0,20:20:51.17:712,51,0	0/0:27,0:27:81.25:0,81,1250	0/0:40,0:40:99:0,117,1797	0/0:23,0:23:69.24:0,69,1103
chr10	77186377	.	GA	G	794.43	PASS	AB=0.874;AC=11;AF=0.196;AN=56;BaseQRankSum=7.857;DP=560;FS=2.635;HRun=13;HaplotypeScore=68.4086;InbreedingCoeff=0.3893;MQ=63.60;MQ0=4;MQRankSum=1.251;QD=4.34;ReadPosRankSum=4.134;VQSLOD=1.1557;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,43:55:85.48:780,85,0	0/0:9,0:9:22.12:0,22,192	0/0:14,0:9:12.23:0,12,91	0/0:12,2:8:3.56:0,4,11	1/1:5,0:23:24.40:72,24,0	0/0:14,0:14:36.05:0,36,346	0/0:20,0:22:27.58:0,28,388	0/0:18,0:18:42.01:0,42,388	0/1:17,3:22:12.69:13,0,375	0/0:20,1:22:1.15:0,1,190	0/0:19,3:23:16.16:0,16,449	0/0:11,0:11:20.84:0,21,173	0/0:12,1:13:2.12:0,2,178	0/0:14,0:14:32.91:0,33,284	0/1:18,2:20:1.75:2,0,308	0/0:14,0:15:35.88:0,36,330	0/0:36,2:39:46.11:0,46,736	0/1:13,4:18:7.95:8,0,233	0/0:14,0:14:23.98:0,24,220	0/0:19,0:21:8.85:0,9,210	0/1:7,1:8:6.01:6,0,93	0/1:17,2:20:7.28:7,0,266	0/0:21,0:22:40.98:0,41,394	0/0:30,4:36:21.09:0,21,663	1/1:2,0:17:20.35:60,20,0	0/0:16,1:18:10.96:0,11,242	0/0:14,1:15:5.94:0,6,213	0/0:15,2:17:22.93:0,23,348
chr10	77188039	.	A	AT	772.23	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-1.629;DP=374;FS=2.586;HRun=8;HaplotypeScore=35.0460;InbreedingCoeff=0.6491;MQ=56.32;MQ0=11;MQRankSum=0.195;QD=17.16;ReadPosRankSum=0.308;VQSLOD=2.9123;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:87.03:0,87,791	0/0:3,0:3:9:0,9,82	0/0:4,0:3:3:0,3,27	0/0:10,0:4:5.87:0,6,42	1/1:3,14:17:36.11:412,36,0	0/0:14,0:15:41.06:0,41,363	0/0:12,0:10:23.69:0,24,202	0/0:33,0:32:68.99:0,69,626	0/0:10,0:10:21.20:0,21,215	0/0:17,0:17:42.01:0,42,384	0/0:12,0:11:27.01:0,27,247	0/0:9,0:8:21:0,21,192	0/0:5,0:5:12.01:0,12,110	0/0:11,0:11:33.02:0,33,302	0/0:12,0:12:33.02:0,33,302	0/1:9,0:9:0.41:0,0,168	0/0:27,0:27:66.02:0,66,604	0/0:26,0:26:57.01:0,57,521	0/0:19,0:17:39:0,39,352	0/0:10,0:10:26.99:0,27,242	0/0:8,0:8:18:0,18,165	0/0:3,0:2:3:0,3,27	0/0:6,0:6:9:0,9,82	0/0:4,0:4:9:0,9,82	1/1:6,13:18:42.12:480,42,0	0/0:13,0:13:24:0,24,219	0/0:15,0:15:39:0,39,352	0/0:11,0:11:33.02:0,33,302
chr10	77188103	.	CG	C	1126.35	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.075;DP=438;FS=4.561;HRun=3;HaplotypeScore=42.9639;InbreedingCoeff=0.8976;MQ=57.19;MQ0=13;MQRankSum=0.455;QD=29.64;ReadPosRankSum=-0.255;VQSLOD=2.5926;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:84.26:0,84,1177	0/0:6,0:6:15.05:0,15,213	0/0:3,0:2:3.84:0,4,13	0/0:9,0:6:14.94:0,15,151	1/1:0,23:23:60.18:729,60,0	0/0:23,0:23:69.23:0,69,991	0/0:15,0:12:33.11:0,33,470	0/0:35,0:31:93.15:0,93,1215	0/0:13,0:13:39.13:0,39,555	0/0:17,0:17:51.17:0,51,725	0/0:17,0:17:51.16:0,51,712	0/0:11,0:10:30.09:0,30,409	0/0:7,0:7:21.07:0,21,301	0/0:14,0:14:42.14:0,42,598	0/0:7,0:7:21.07:0,21,299	0/0:12,0:12:33.10:0,33,458	0/0:36,0:36:99:0,108,1523	0/0:24,0:24:63.21:0,63,905	0/0:15,0:14:42.04:0,42,560	0/0:15,0:14:39.13:0,39,560	0/0:20,0:20:60.20:0,60,861	0/0:4,0:4:12.04:0,12,173	0/0:17,0:16:48.16:0,48,690	0/0:8,0:8:24.08:0,24,345	1/1:2,13:14:42.13:519,42,0	0/0:14,0:14:42.12:0,42,582	0/0:12,0:12:33.08:0,33,452	0/0:15,0:15:45.10:0,45,605
chr10	77188734	.	TA	T	365.42	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=4.258;DP=517;FS=0.703;HRun=11;HaplotypeScore=77.2970;InbreedingCoeff=0.5116;MQ=54.94;MQ0=38;MQRankSum=-0.952;QD=6.64;ReadPosRankSum=1.860;VQSLOD=2.0952;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:12:21.52:0,22,223	0/0:10,0:9:24.05:0,24,250	0/0:58,1:10:6.25:0,6,43	0/0:74,1:20:13.68:0,14,102	1/1:6,13:19:41.54:315,42,0	0/0:9,0:7:14.80:0,15,130	0/0:11,0:9:17.28:0,17,136	0/0:21,0:21:27.77:0,28,255	0/0:8,0:6:11.96:0,12,104	0/0:22,0:22:49.86:0,50,478	0/0:18,0:16:27.50:0,27,273	0/0:13,1:12:2.75:0,3,182	0/1:15,0:14:3.56:4,0,199	0/0:13,0:11:19.56:0,20,184	0/0:16,0:11:22.87:0,23,228	0/0:13,0:13:14.35:0,14,325	0/0:25,0:25:39.77:0,40,378	0/0:19,0:17:13.47:0,13,239	0/0:19,0:15:10.22:0,10,170	0/0:16,1:17:10.52:0,11,241	0/0:8,0:6:16.28:0,16,162	0/0:3,0:3:3.01:0,3,31	0/1:10,0:9:11.32:11,0,85	0/0:8,0:8:18:0,18,179	1/1:2,9:11:20.87:163,21,0	0/0:22,0:23:38.21:0,38,458	0/0:22,0:21:50.31:0,50,442	0/0:10,0:9:24.06:0,24,256
chr10	77189223	.	C	CA	704.39	PASS	AB=0.818;AC=4;AF=0.071;AN=56;BaseQRankSum=8.965;DP=617;FS=1.235;HRun=9;HaplotypeScore=127.1908;InbreedingCoeff=0.4527;MQ=119.51;MQ0=0;MQRankSum=1.954;QD=7.41;ReadPosRankSum=-0.981;VQSLOD=1.3569;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:59.96:0,60,518	0/0:9,0:9:26.98:0,27,231	0/0:58,0:58:21.88:0,22,349	0/1:56,0:56:44.32:44,0,177	0/1:9,12:21:33.18:311,0,33	0/0:31,0:30:83.94:0,84,723	0/0:22,0:22:65.95:0,66,564	0/0:16,0:16:20.95:0,21,180	0/0:18,0:18:38.97:0,39,334	0/0:31,0:31:74.98:0,75,651	0/0:20,0:20:50.98:0,51,442	0/0:17,0:17:47.99:0,48,417	0/0:16,0:16:38.98:0,39,339	0/0:13,0:13:29.97:0,30,257	0/0:23,0:24:58.99:0,59,494	0/0:16,0:16:41.97:0,42,361	0/0:23,0:23:68.96:0,69,594	0/0:25,0:25:71.90:0,72,609	0/0:13,0:13:29.96:0,30,257	0/0:35,1:36:50.78:0,51,670	0/0:7,0:7:14.94:0,15,123	0/0:27,1:28:29.84:0,30,480	0/0:17,0:18:47.02:0,47,397	0/0:8,0:8:23.97:0,24,203	1/1:3,15:18:42.11:465,42,0	0/0:17,0:18:50.02:0,50,420	0/0:24,0:24:59.95:0,60,513	0/0:7,0:7:21:0,21,182
chr10	77189999	.	T	TA	479.34	PASS	AB=0.658;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.245;DP=541;FS=1.524;HRun=11;HaplotypeScore=59.4643;InbreedingCoeff=0.3957;MQ=69.34;MQ0=0;MQRankSum=-0.666;QD=9.40;ReadPosRankSum=0.232;VQSLOD=2.4058;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:31.59:0,32,373	0/0:10,0:10:20.69:0,21,162	0/0:10,0:12:6.62:0,7,100	0/0:4,0:4:2.98:0,3,23	1/1:7,16:26:7.14:381,7,0	0/0:20,0:20:50.80:0,51,394	0/0:15,1:19:5.54:0,6,196	0/0:28,0:29:61.78:0,62,470	0/0:23,0:23:44.76:0,45,345	0/0:32,1:33:44.24:0,44,527	0/0:12,1:13:2.41:0,2,202	0/0:13,0:13:26.88:0,27,209	0/0:16,0:16:41.81:0,42,325	0/0:19,0:21:45.86:0,46,337	0/0:18,0:18:38.80:0,39,301	0/0:11,0:11:23.86:0,24,186	0/0:24,0:24:65.70:0,66,504	0/0:14,0:14:20.88:0,21,162	0/0:16,1:19:41.10:0,41,289	0/0:19,0:20:43.84:0,44,331	0/0:19,0:19:38.78:0,39,302	0/0:17,0:18:43.85:0,44,331	0/0:25,0:25:47.69:0,48,365	0/0:22,0:24:48.76:0,49,350	0/1:12,10:25:13.91:193,0,14	0/0:27,0:29:69.77:0,70,519	0/0:25,0:25:53.70:0,54,415	0/0:10,0:10:20.91:0,21,163
chr10	77191281	.	G	GTGATATAAC	3719.66	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.322;DP=597;FS=3.704;HRun=0;HaplotypeScore=161.7343;InbreedingCoeff=0.9916;MQ=90.42;MQ0=0;MQRankSum=-8.386;QD=100.53;ReadPosRankSum=-0.539;VQSLOD=4.1301;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,123,3516	0/0:6,0:6:18.05:0,18,481	0/0:24,0:24:65.37:0,65,1774	0/0:25,0:25:66.17:0,66,1769	1/1:6,18:26:63.13:2862,63,0	0/0:22,0:22:63.22:0,63,1933	0/0:13,0:13:39.12:0,39,1074	0/0:29,0:29:75.23:0,75,2030	0/0:19,0:19:54.19:0,54,1652	0/0:24,0:24:66.23:0,66,2022	0/0:17,0:17:51.18:0,51,1559	0/0:15,0:15:45.12:0,45,1231	0/0:14,0:14:42.14:0,42,1303	0/0:23,0:23:69.20:0,69,1908	0/0:17,0:17:51.18:0,51,1571	0/0:14,0:14:42.14:0,42,1302	0/0:25,0:25:69.22:0,69,2071	0/0:24,0:24:72.25:0,72,2130	0/0:21,0:21:63.22:0,63,1929	0/0:21,0:21:63.20:0,63,1873	0/0:37,0:37:99:0,99,2909	0/0:14,0:14:42.14:0,42,1226	0/0:23,0:23:66.23:0,66,2001	0/0:30,0:30:81.26:0,81,2443	1/1:6,5:11:21.07:858,21,0	0/0:26,0:26:72.25:0,72,2177	0/0:24,0:24:72.25:0,72,2127	0/0:7,0:7:21.02:0,21,509
chr10	77192323	.	ATG	A	144.22	PASS	AB=0.778;AC=2;AF=0.036;AN=56;BaseQRankSum=3.450;DP=592;FS=1.151;HRun=0;HaplotypeScore=94.8657;InbreedingCoeff=0.0613;MQ=54.78;MQ0=7;MQRankSum=-0.341;QD=4.97;ReadPosRankSum=-1.649;VQSLOD=2.2749;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:5,20:25:9.19:218,0,9	0/0:8,0:8:2.70:0,3,195	0/0:24,0:16:38.99:0,39,518	0/0:32,0:20:27.61:0,28,632	0/0:12,0:12:18.06:0,18,294	0/0:32,0:30:68.86:0,69,1026	0/0:27,0:27:57.20:0,57,972	0/0:34,0:33:89.62:0,90,1439	0/0:25,0:25:60.20:0,60,996	0/0:21,0:21:53.96:0,54,776	0/0:16,0:16:26.56:0,27,397	0/0:21,0:20:48.13:0,48,765	0/0:25,0:25:69.21:0,69,1143	0/0:15,0:15:20.09:0,20,290	0/0:24,0:24:48.04:0,48,830	0/0:23,0:22:39.12:0,39,637	0/0:14,0:13:21.54:0,22,349	0/0:27,0:27:48.08:0,48,839	0/0:16,0:16:39.13:0,39,640	0/0:12,0:12:17.55:0,18,269	0/0:24,0:24:43.12:0,43,635	0/0:23,0:23:38.93:0,39,672	0/0:18,0:17:30.10:0,30,482	0/0:24,0:24:42:0,42,658	0/0:9,0:9:11.74:0,12,143	0/0:33,0:34:95.46:0,95,1489	0/0:22,0:22:41.84:0,42,793	0/1:4,0:3:2.13:2,0,34
chr10	77192604	.	T	TCA	243.05	PASS	AB=0.951;AC=15;AF=0.375;AN=40;BaseQRankSum=0.457;DP=390;FS=1.505;HRun=0;HaplotypeScore=59.6799;InbreedingCoeff=0.0492;MQ=75.66;MQ0=14;MQRankSum=-1.323;QD=1.61;ReadPosRankSum=-0.363;VQSLOD=1.2883;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:5.65:0,6,28	1/1:4,0:4:3:25,3,0	./.	./.	0/0:3,0:4:2.84:0,3,14	0/1:14,0:14:24.53:26,0,25	0/0:19,0:17:2.51:0,3,30	./.	0/0:15,0:15:0.40:0,0,27	0/0:9,0:9:2.81:0,3,14	./.	0/0:16,0:15:2.86:0,3,23	0/0:11,0:12:2.22:0,2,13	0/0:11,0:11:4.32:0,4,57	./.	./.	1/1:12,2:14:3.01:43,3,0	0/1:13,2:15:24.34:37,0,24	1/1:14,0:14:6.28:33,6,0	./.	0/1:36,1:42:38.75:39,0,87	0/0:10,0:10:5.63:0,6,25	./.	0/1:25,0:25:8.17:8,0,180	0/0:8,0:8:2.84:0,3,14	1/1:11,1:12:7.26:82,7,0	0/1:6,0:5:8.17:31,0,8	1/1:4,0:4:3.01:41,3,0
chr10	77194322	.	AC	A	1504.64	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.970;DP=755;FS=7.505;HRun=5;HaplotypeScore=72.5323;InbreedingCoeff=0.9730;MQ=82.81;MQ0=0;MQRankSum=-4.995;QD=28.39;ReadPosRankSum=2.528;VQSLOD=4.0618;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,53:53:99:1600,141,0	0/0:7,0:7:21.07:0,21,284	0/0:30,0:30:89.08:0,89,1150	0/0:18,0:18:18.31:0,18,464	0/0:21,0:21:60.16:0,60,767	0/0:19,0:19:57.19:0,57,779	0/0:28,0:28:72.19:0,72,948	0/0:30,0:30:90.26:0,90,1174	0/0:33,0:33:96.28:0,96,1263	0/0:24,0:24:66.21:0,66,889	0/0:15,0:15:42.14:0,42,573	0/0:33,0:33:99:0,99,1324	0/0:39,0:39:99:0,117,1599	0/0:24,0:24:66.22:0,66,901	0/0:35,0:35:96.30:0,96,1293	0/0:23,0:23:63.20:0,63,847	0/0:46,0:46:99:0,129,1725	0/0:24,0:24:66.19:0,66,868	0/0:26,0:26:66.21:0,66,887	0/0:24,0:24:69.23:0,69,942	0/0:49,0:48:99:0,141,1874	0/0:21,0:21:57.19:0,57,777	0/0:29,0:29:72.23:0,72,968	0/0:37,0:37:99:0,105,1413	0/0:13,0:13:33.11:0,33,448	0/0:19,0:19:54.18:0,54,739	0/0:29,0:28:84.28:0,84,1148	0/0:6,0:6:15:0,15,154
chr10	77194570	.	TGAGAGA	T	3532.88	PASS	AB=0.787;AC=32;AF=0.571;AN=56;BaseQRankSum=5.818;DP=565;FS=13.663;HRun=0;HaplotypeScore=124.9040;InbreedingCoeff=0.6177;MQ=67.95;MQ0=12;MQRankSum=-5.562;QD=11.43;ReadPosRankSum=0.116;VQSLOD=2.0040;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:20.75:0,21,405	1/1:9,2:11:3.01:61,3,0	0/0:37,0:23:3.01:0,3,34	0/0:40,0:21:0.47:0,0,1	0/0:28,0:28:5.42:0,5,74	1/1:5,5:10:9.03:163,9,0	1/1:9,0:8:3.01:40,3,0	1/1:24,3:27:10.91:125,11,0	0/0:16,0:16:27.09:0,27,786	1/1:17,12:29:33.08:573,33,0	1/1:10,8:18:2.22:7,2,0	0/0:20,0:20:27.06:0,27,515	0/0:20,0:20:36.10:0,36,905	1/1:9,6:15:12.04:244,12,0	1/1:4,10:14:12.04:244,12,0	1/1:12,7:19:12:203,12,0	1/1:13,11:24:9.03:183,9,0	0/1:7,4:11:63.49:109,0,63	0/1:17,0:20:49.16:52,0,49	1/1:17,10:26:11.14:236,11,0	1/1:22,0:22:9.03:135,9,0	0/0:17,0:18:21.07:0,21,585	0/0:22,0:21:27.05:0,27,617	0/0:17,0:17:30.10:0,30,888	0/0:15,0:14:5.15:0,5,60	1/1:10,5:15:23.46:370,23,0	1/1:15,12:29:41.82:732,42,0	1/1:7,1:7:0.66:57,1,0
chr10	77195986	.	AT	A	981.28	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.290;DP=401;FS=0.623;HRun=8;HaplotypeScore=44.3843;InbreedingCoeff=0.9237;MQ=80.23;MQ0=0;MQRankSum=-1.004;QD=22.30;ReadPosRankSum=0.673;VQSLOD=3.6558;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:48.06:463,48,0	0/0:10,0:10:27.05:0,27,311	0/0:15,0:15:3.51:0,4,289	0/0:13,0:12:18.04:0,18,211	1/1:3,11:14:39.06:376,39,0	0/0:18,0:18:42.10:0,42,491	0/0:22,0:22:66.19:0,66,787	0/0:30,0:30:72.22:0,72,870	0/0:8,0:8:21.06:0,21,254	0/0:25,0:25:72.22:0,72,870	0/0:18,0:18:51.16:0,51,616	0/0:5,0:5:15.05:0,15,181	0/0:12,0:12:33.10:0,33,398	0/0:14,0:14:30.09:0,30,362	0/0:12,0:12:33.06:0,33,373	0/0:10,0:10:30.08:0,30,353	0/0:17,0:16:45.11:0,45,526	0/0:13,0:13:33.09:0,33,388	0/0:22,0:22:60.17:0,60,714	0/0:15,0:15:42.13:0,42,507	0/0:5,0:5:12.04:0,12,145	0/0:9,0:9:24.07:0,24,290	0/0:9,0:9:27.07:0,27,315	0/0:12,0:12:33.10:0,33,399	1/1:5,7:12:30.03:284,30,0	0/0:12,0:12:33.10:0,33,398	0/0:17,0:17:45.13:0,45,532	0/0:14,0:14:42.11:0,42,494
chr10	77196083	.	A	AT	1007.37	PASS	AB=0.941;AC=5;AF=0.089;AN=56;BaseQRankSum=4.810;DP=496;FS=3.015;HRun=9;HaplotypeScore=55.7996;InbreedingCoeff=0.8267;MQ=79.31;MQ0=0;MQRankSum=-2.870;QD=17.37;ReadPosRankSum=0.532;VQSLOD=3.6953;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:56.99:0,57,495	0/0:5,0:5:15:0,15,130	0/1:15,0:14:3.74:4,0,144	0/0:22,0:22:39.86:0,40,307	1/1:3,22:26:63.17:696,63,0	0/0:14,0:14:32.99:0,33,287	0/0:23,0:23:59.20:0,59,502	0/0:29,0:29:65.98:0,66,573	0/0:16,0:17:48.46:0,48,417	0/0:19,1:20:23.80:0,24,435	0/0:23,0:24:61.99:0,62,519	0/0:10,0:10:23.99:0,24,208	0/0:13,0:13:38.99:0,39,338	0/0:17,0:17:44.97:0,45,386	0/0:18,1:19:20.80:0,21,409	0/0:12,0:12:32.99:0,33,286	0/0:26,0:27:67.96:0,68,569	0/0:20,0:20:53.96:0,54,464	0/0:19,0:19:53.98:0,54,469	0/0:16,0:16:34.83:0,35,320	0/0:23,0:23:68.93:0,69,589	0/0:14,0:14:32.99:0,33,286	0/0:20,0:20:50.89:0,51,433	0/0:14,0:13:41.92:0,42,353	1/1:1,15:16:39.11:431,39,0	0/0:13,0:13:29.97:0,30,260	0/0:13,0:13:32.99:0,33,286	0/0:12,0:12:35.98:0,36,309
chr10	77196628	.	A	AT	619.14	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=1.552;DP=445;FS=7.777;HRun=8;HaplotypeScore=46.4614;InbreedingCoeff=0.6555;MQ=66.15;MQ0=2;MQRankSum=-1.774;QD=10.86;ReadPosRankSum=-1.851;VQSLOD=1.0989;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,1024	0/0:5,0:5:14.98:0,15,131	0/0:14,1:11:17.16:0,17,133	0/1:17,0:11:5.06:5,0,63	1/1:3,16:19:17.68:457,18,0	0/0:13,0:13:39.02:0,39,357	0/0:18,0:18:44.94:0,45,395	0/0:28,0:28:47.91:0,48,417	0/0:18,0:18:54.01:0,54,488	0/0:10,0:9:30.02:0,30,274	0/0:15,0:15:39.02:0,39,356	0/0:17,0:16:41.97:0,42,376	0/1:9,0:9:7.57:8,0,188	0/0:10,0:10:29.96:0,30,265	0/0:12,0:12:26.95:0,27,237	0/0:7,0:7:21.01:0,21,191	0/0:26,0:26:66.03:0,66,604	0/0:24,0:24:41.37:0,41,489	0/0:22,0:21:41.98:0,42,373	0/0:19,0:20:50.06:0,50,445	0/0:17,0:17:45.01:0,45,408	0/0:4,0:4:12.01:0,12,110	0/0:10,0:10:30.02:0,30,275	0/0:22,0:22:63.03:0,63,577	1/1:0,12:12:24.07:277,24,0	0/0:13,0:13:33.02:0,33,302	0/0:15,0:15:45.02:0,45,411	0/0:6,0:6:18.01:0,18,165
chr10	77196980	.	GGCCTGAAACCTA	G	3021.92	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.958;DP=589;FS=0.000;HRun=0;HaplotypeScore=196.5887;InbreedingCoeff=0.9994;MQ=78.45;MQ0=0;MQRankSum=-8.259;QD=70.28;ReadPosRankSum=1.572;VQSLOD=3.4429;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,5610	0/0:11,0:11:33.11:0,33,1993	0/0:19,0:19:51.18:0,51,2773	0/0:15,0:15:42.11:0,42,1986	1/1:3,26:29:57.20:2143,57,0	0/0:20,0:20:57.20:0,57,3309	0/0:20,0:20:51.13:0,51,2688	0/0:23,0:23:66.22:0,66,3035	0/0:18,0:18:42.14:0,42,2353	0/0:25,0:25:75.26:0,75,4174	0/0:27,0:27:81.28:0,81,4830	0/0:19,0:19:48.16:0,48,2803	0/0:13,0:13:36.12:0,36,2019	0/0:17,0:17:51.18:0,51,2804	0/0:21,0:21:57.18:0,57,3103	0/0:23,0:23:66.23:0,66,3970	0/0:18,0:18:48.16:0,48,2695	0/0:21,0:21:60.21:0,60,3239	0/0:25,0:25:75.24:0,75,3993	0/0:30,0:30:90.31:0,90,5238	0/0:33,0:33:90.31:0,90,4983	0/0:14,0:14:42.14:0,42,2468	0/0:14,0:14:42.14:0,42,2606	0/0:19,0:19:57.20:0,57,3262	1/1:1,13:13:30.10:1001,30,0	0/0:26,0:26:78.27:0,78,4398	0/0:29,0:29:84.27:0,84,4843	0/0:13,0:13:39.13:0,39,2142
chr10	77200411	.	C	CGT	1752.50	PASS	AB=0.916;AC=32;AF=0.615;AN=52;BaseQRankSum=-1.078;DP=613;FS=0.776;HRun=0;HaplotypeScore=94.5588;InbreedingCoeff=0.2033;MQ=52.09;MQ0=33;MQRankSum=-0.629;QD=3.73;ReadPosRankSum=-2.661;VQSLOD=1.4921;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:34:16.87:144,17,0	0/1:5,1:7:5.13:56,0,5	./.	0/1:51,0:10:0:0,0,0	./.	0/1:17,0:17:26.09:144,0,26	0/1:25,8:33:26.92:39,0,27	1/1:21,0:18:5.16:24,5,0	0/0:16,0:16:9.02:0,9,98	0/1:13,0:10:19.89:102,0,20	1/1:6,3:10:3.01:45,3,0	0/0:18,0:18:3.10:0,3,150	0/0:16,0:17:11.52:0,12,112	0/1:12,8:22:23.89:81,0,24	1/1:19,0:22:5.56:67,6,0	1/1:11,9:20:5.86:90,6,0	1/1:18,12:30:12.04:180,12,0	1/1:26,4:31:13.56:345,14,0	0/1:14,0:13:3.72:23,0,4	1/1:7,5:13:9.91:137,10,0	1/1:27,12:41:6.02:90,6,0	0/0:9,0:9:3.01:0,3,33	0/0:8,0:8:13.59:0,14,134	0/1:43,2:47:33.33:33,0,422	0/0:17,0:17:2.83:0,3,14	1/1:13,1:14:10.39:126,10,0	1/1:14,0:12:6:68,6,0	1/1:10,3:12:9.02:116,9,0
chr10	77200438	.	GTGTGTGTGTGTGA	G	128.97	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=2.608;DP=582;FS=3.673;HRun=0;HaplotypeScore=175.9042;InbreedingCoeff=0.7100;MQ=56.65;MQ0=17;MQRankSum=0.371;QD=3.00;ReadPosRankSum=-1.188;VQSLOD=2.6839;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:44.75:0,45,1806	0/0:7,0:7:21.07:0,21,811	0/0:32,0:11:28.50:0,29,354	0/0:39,0:14:25.84:0,26,439	1/1:5,2:6:9:118,9,0	0/0:14,0:13:27.09:0,27,1398	0/0:31,0:31:49.99:0,50,1525	0/0:23,0:21:59.54:0,60,1350	0/0:22,0:22:63.22:0,63,2572	0/0:17,0:16:45.09:0,45,1516	0/0:11,0:11:15.05:0,15,399	0/0:19,0:19:54.18:0,54,2010	0/0:13,0:13:27.56:0,28,1427	0/0:20,0:20:27.09:0,27,1103	0/1:17,0:17:6.95:7,0,1131	0/0:22,0:22:36.12:0,36,1048	0/0:29,0:28:51.04:0,51,1760	0/0:23,0:23:69.19:0,69,2968	0/0:16,0:14:40:0,40,988	0/0:12,0:12:27.07:0,27,1061	0/0:42,0:42:45.80:0,46,1422	0/0:12,0:12:24.08:0,24,770	0/0:11,0:11:27.09:0,27,1201	0/0:54,0:53:99:0,144,6350	1/1:6,13:19:5.71:112,6,0	0/0:15,0:15:45.15:0,45,1975	0/0:11,0:10:27.56:0,28,782	0/0:10,0:9:24.08:0,24,1000
chr10	77200682	.	G	GCGCTCT	5321.77	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-0.733;DP=529;FS=4.344;HRun=0;HaplotypeScore=115.0509;InbreedingCoeff=0.9094;MQ=53.97;MQ0=11;MQRankSum=-1.737;QD=16.22;ReadPosRankSum=-1.013;VQSLOD=3.9622;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:17.30:0,17,347	1/1:6,0:5:14.94:116,15,0	0/0:12,0:5:12.03:0,12,135	0/0:29,0:15:44.82:0,45,406	0/0:13,0:13:26.82:0,27,204	0/1:16,0:16:6.67:150,0,7	1/1:20,0:20:13.13:220,13,0	1/1:33,0:33:63.85:498,64,0	0/0:17,0:17:32.55:0,33,271	1/1:31,0:29:70.15:641,70,0	1/1:17,0:15:35.83:275,36,0	0/0:14,0:14:29.97:0,30,253	0/0:13,0:13:26.90:0,27,248	1/1:17,0:17:35.39:226,35,0	1/1:19,0:18:11.82:313,12,0	1/1:16,0:16:26.75:227,27,0	1/1:25,0:24:50.88:434,51,0	1/1:17,0:17:38.73:399,39,0	1/1:11,0:11:29.16:281,29,0	1/1:13,0:13:26.62:194,27,0	1/1:34,0:34:62.17:525,62,0	0/0:14,0:13:26.81:0,27,227	0/0:16,0:16:35.95:0,36,296	0/0:21,0:21:37.19:0,37,396	0/0:25,0:25:38.53:0,39,330	1/1:18,0:17:44.13:302,44,0	1/1:4,10:12:6.74:122,7,0	1/1:21,0:21:54.10:399,54,0
chr10	77200866	.	G	GT	918.18	PASS	AB=0.824;AC=5;AF=0.089;AN=56;BaseQRankSum=-6.872;DP=522;FS=4.956;HRun=10;HaplotypeScore=59.0540;InbreedingCoeff=0.5765;MQ=73.53;MQ0=0;MQRankSum=-0.289;QD=16.69;ReadPosRankSum=-0.707;VQSLOD=3.8819;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:65.87:0,66,541	0/0:11,0:11:23.96:0,24,197	0/0:15,0:15:22.03:0,22,160	0/0:16,0:16:4.36:0,4,183	1/1:3,19:22:49.34:503,49,0	0/0:12,0:12:35.96:0,36,295	0/0:20,0:20:53.92:0,54,443	0/0:34,0:34:71.81:0,72,584	0/0:13,0:13:14.93:0,15,123	0/0:23,0:23:50.91:0,51,417	0/0:19,2:21:27.93:0,28,436	0/0:14,1:15:0.97:0,1,214	0/0:12,0:12:35.96:0,36,296	0/0:14,0:15:43.99:0,44,351	0/0:13,0:13:26.96:0,27,222	0/0:15,0:15:35.94:0,36,296	0/0:33,0:33:86.84:0,87,710	0/0:13,1:14:0.98:0,1,214	0/0:17,0:17:47.92:0,48,392	0/0:23,0:23:56.91:0,57,466	0/0:32,2:34:45.89:0,46,583	0/0:15,1:16:6.95:0,7,263	0/1:11,3:14:31.02:31,0,189	0/0:19,0:19:38.92:0,39,320	1/1:1,18:19:48.12:512,48,0	0/0:19,0:19:44.79:0,45,360	0/0:19,0:19:38.90:0,39,320	0/0:5,0:5:14.98:0,15,123
chr10	77201766	.	GA	G	648.81	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=8.248;DP=581;FS=0.570;HRun=11;HaplotypeScore=62.3858;InbreedingCoeff=0.7093;MQ=73.29;MQ0=2;MQRankSum=-1.093;QD=9.83;ReadPosRankSum=-1.173;VQSLOD=2.3772;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,3:63:99:0,113,1554	0/0:8,0:8:24.06:0,24,256	0/1:22,0:16:27.46:27,0,46	0/0:9,0:6:4.85:0,5,72	1/1:4,19:24:58.96:474,59,0	0/0:17,0:17:42.11:0,42,448	0/0:31,0:31:84.17:0,84,883	0/0:23,0:24:60.01:0,60,615	0/0:14,0:14:39.10:0,39,416	0/0:27,0:27:61.19:0,61,697	0/0:17,1:19:17.40:0,17,377	0/0:10,0:10:21.05:0,21,223	0/0:17,0:18:47.95:0,48,483	0/0:22,1:23:38.77:0,39,599	0/0:15,0:16:47.91:0,48,475	0/0:17,2:19:23.48:0,23,455	0/0:18,0:18:51.13:0,51,544	0/0:12,0:12:36.09:0,36,383	0/0:17,2:19:8.66:0,9,411	0/0:28,0:29:68.94:0,69,680	0/0:11,0:11:24.06:0,24,256	0/0:22,0:23:62.99:0,63,652	0/0:19,1:20:29.49:0,29,518	0/0:13,1:16:17.11:0,17,347	1/1:2,15:18:34.99:277,35,0	0/0:23,0:23:51.09:0,51,526	0/0:23,0:24:62.96:0,63,641	0/0:20,0:20:57.14:0,57,608
chr10	77203935	.	TC	T	727.69	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.560;DP=557;FS=0.741;HRun=5;HaplotypeScore=60.2585;InbreedingCoeff=0.9899;MQ=91.91;MQ0=0;MQRankSum=-1.339;QD=26.95;ReadPosRankSum=0.525;VQSLOD=3.4010;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,1606	0/0:6,0:6:18.05:0,18,230	0/0:34,1:35:62.35:0,62,1203	0/0:27,0:27:63.06:0,63,764	1/1:0,14:14:39.11:441,39,0	0/0:15,0:15:42.13:0,42,558	0/0:22,0:22:63.17:0,63,802	0/0:31,0:31:74.89:0,75,964	0/0:13,0:13:39.12:0,39,516	0/0:19,0:19:54.18:0,54,738	0/0:16,0:16:45.15:0,45,615	0/0:15,0:15:45.15:0,45,615	0/0:9,0:9:27.07:0,27,340	0/0:23,0:23:66.17:0,66,868	0/0:13,0:13:39.10:0,39,487	0/0:17,0:17:48.12:0,48,610	0/0:45,0:45:99:0,132,1722	0/0:29,0:29:87.27:0,87,1156	0/0:16,0:16:39.12:0,39,518	0/0:8,0:8:21.07:0,21,287	0/0:32,0:32:90.25:0,90,1165	0/0:8,0:8:24.08:0,24,327	0/0:7,0:7:21.07:0,21,287	0/0:18,0:18:51.16:0,51,680	1/1:1,12:13:36.10:408,36,0	0/0:18,0:18:51.17:0,51,690	0/0:25,0:25:75.19:0,75,947	0/0:20,0:20:60.20:0,60,816
chr10	77206613	.	TG	T	133.99	PASS	AB=0.950;AC=6;AF=0.107;AN=56;BaseQRankSum=6.311;DP=338;FS=2.934;HRun=1;HaplotypeScore=45.5996;InbreedingCoeff=0.3931;MQ=64.13;MQ0=10;MQRankSum=-2.983;QD=5.36;ReadPosRankSum=-1.446;VQSLOD=0.0190;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:64.86:0,65,676	0/0:3,0:3:4.64:0,5,65	0/0:19,0:9:13.84:0,14,139	0/0:17,0:8:4.91:0,5,52	1/1:3,1:4:5.91:54,6,0	0/0:5,0:5:5.08:0,5,91	0/0:15,2:17:13.78:0,14,321	0/0:12,0:12:35.92:0,36,292	0/0:8,0:7:20.92:0,21,202	0/0:7,0:7:20.98:0,21,208	0/0:2,0:1:3.01:0,3,37	0/0:15,0:14:11.12:0,11,218	0/0:9,0:8:20.99:0,21,222	0/0:10,0:10:19.12:0,19,233	0/0:12,0:12:32.96:0,33,351	0/0:10,0:10:27.05:0,27,303	0/0:38,0:37:78.24:0,78,934	0/1:8,1:9:9.07:9,0,171	0/0:17,0:17:17.16:0,17,300	0/0:8,0:7:13.64:0,14,89	0/0:18,0:18:27.91:0,28,295	0/0:2,0:2:0.08:0,0,32	0/1:6,0:6:2.31:2,0,78	0/0:26,0:26:62.85:0,63,660	1/1:1,5:5:15.02:182,15,0	0/0:10,1:10:26.91:0,27,257	0/0:12,0:12:7.90:0,8,234	0/0:2,0:2:5.81:0,6,49
chr10	77207512	.	GA	G	182.83	PASS	AB=0.786;AC=20;AF=0.625;AN=32;BaseQRankSum=-2.793;DP=66;FS=11.389;HRun=13;HaplotypeScore=13.0268;InbreedingCoeff=0.1236;MQ=81.34;MQ0=7;MQRankSum=-0.611;QD=4.46;ReadPosRankSum=-0.436;VQSLOD=-0.1713;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:2.94:21,3,0	1/1:0,1:1:2.94:18,3,0	0/1:17,1:6:11.57:12,0,25	0/0:18,1:4:4.50:0,4,17	./.	1/1:0,1:1:2.98:22,3,0	./.	1/1:1,0:1:2.98:22,3,0	./.	1/1:1,1:2:5.96:43,6,0	0/0:0,1:1:0:0,0,0	./.	./.	0/0:1,0:1:0:0,0,0	./.	./.	0/1:2,3:4:20.30:27,0,20	1/1:2,1:3:2.98:22,3,0	1/1:1,1:1:2.98:22,3,0	0/0:0,1:1:0:0,0,0	./.	./.	1/1:1,0:1:2.98:22,3,0	./.	0/0:2,0:1:0:0,0,0	./.	./.	1/1:1,1:3:7.96:46,8,0
chr10	77207528	.	AG	A	36.28	PASS	AB=1.000;AC=7;AF=0.146;AN=48;BaseQRankSum=3.397;DP=120;FS=3.060;HRun=1;HaplotypeScore=17.9635;InbreedingCoeff=0.3209;MQ=64.85;MQ0=8;MQRankSum=-1.549;QD=3.63;ReadPosRankSum=0.445;VQSLOD=0.0718;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:9.03:0,9,117	0/0:1,0:1:3.01:0,3,36	0/0:22,1:8:4.47:0,4,84	0/0:20,1:8:1.51:0,2,76	1/1:0,3:3:8.98:75,9,0	0/0:1,0:1:3.01:0,3,32	0/0:1,0:1:3.01:0,3,39	0/0:9,0:9:27.08:0,27,342	0/0:2,0:2:6.02:0,6,78	0/0:4,0:4:12.04:0,12,157	0/0:5,0:5:6.58:0,7,149	0/0:1,0:1:3.01:0,3,38	0/0:1,0:1:3.01:0,3,40	0/0:1,0:1:3.01:0,3,39	./.	./.	0/0:9,0:8:21.07:0,21,265	0/0:8,0:7:21.06:0,21,264	0/0:10,0:9:26.86:0,27,306	1/1:1,0:1:2.22:7,2,0	./.	./.	0/0:1,0:1:3:0,3,27	0/1:2,0:2:2.28:2,0,34	1/1:2,2:3:7.56:58,8,0	0/0:2,0:2:5.93:0,6,57	0/0:1,0:1:3.01:0,3,40	0/0:6,0:6:17.48:0,17,181
chr10	77208144	.	T	TTTAG	1918.70	PASS	AB=0.667;AC=5;AF=0.089;AN=56;BaseQRankSum=-2.305;DP=636;FS=2.400;HRun=0;HaplotypeScore=100.2800;InbreedingCoeff=0.6480;MQ=62.81;MQ0=1;MQRankSum=-0.320;QD=21.80;ReadPosRankSum=0.223;VQSLOD=3.1603;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:17,15:34:20.32:672,0,20	0/0:7,0:7:12.04:0,12,185	0/0:17,0:12:2.99:0,3,23	0/0:15,0:14:2.99:0,3,23	1/1:24,6:30:28.51:656,29,0	0/0:31,0:31:39.13:0,39,605	0/0:9,0:9:24.05:0,24,328	0/0:29,0:29:8.98:0,9,75	0/0:18,0:18:36.09:0,36,504	0/0:22,0:22:42.13:0,42,610	0/0:18,0:18:45.12:0,45,655	0/0:23,0:23:51.15:0,51,747	0/0:28,0:28:51.15:0,51,751	0/0:19,0:19:33.10:0,33,489	0/0:25,0:25:30.06:0,30,399	0/0:16,0:16:24.07:0,24,351	0/0:29,0:29:60:0,60,735	0/0:32,0:32:57.15:0,57,852	0/0:14,0:13:24.07:0,24,354	0/0:30,0:30:54.10:0,54,745	0/0:17,0:17:24.06:0,24,350	0/0:20,0:20:30.06:0,30,401	0/0:24,0:24:51.12:0,51,725	0/0:20,0:20:42.13:0,42,627	1/1:15,9:24:36.02:719,36,0	0/0:28,0:28:51.16:0,51,752	0/0:42,0:42:75.19:0,75,1075	0/0:15,0:15:24.08:0,24,370
chr10	77208213	.	A	ATAGT	2741.44	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.977;DP=638;FS=6.004;HRun=0;HaplotypeScore=106.6564;InbreedingCoeff=0.9986;MQ=60.28;MQ0=1;MQRankSum=-9.851;QD=51.73;ReadPosRankSum=1.473;VQSLOD=4.7664;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:78.21:0,78,1338	0/0:13,0:13:39.13:0,39,712	0/0:21,0:17:42.06:0,42,630	0/0:13,0:12:26.17:0,26,479	1/1:4,20:24:46.87:1214,47,0	0/0:22,0:22:57.16:0,57,1002	0/0:19,0:19:51.13:0,51,850	0/0:41,0:41:99:0,120,2132	0/0:23,0:23:69.22:0,69,1245	0/0:26,0:26:72.23:0,72,1301	0/0:19,0:19:54.16:0,54,918	0/0:21,0:21:57.16:0,57,965	0/0:23,0:23:63.19:0,63,1097	0/0:19,0:19:51.17:0,51,956	0/0:20,0:20:60.18:0,60,1069	0/0:21,0:21:60.17:0,60,1038	0/0:18,0:18:54.09:0,54,894	0/0:27,0:27:72.20:0,72,1284	0/0:21,0:21:60.17:0,60,998	0/0:31,0:31:87.25:0,87,1543	0/0:10,0:10:27.09:0,27,495	0/0:17,0:17:51.17:0,51,941	0/0:25,0:25:72.22:0,72,1268	0/0:22,0:22:60.18:0,60,1052	1/1:5,24:29:69.23:1649,69,0	0/0:33,0:33:93.31:0,93,1711	0/0:38,0:38:99:0,111,1916	0/0:11,0:11:33.11:0,33,626
chr10	77208881	.	CCACGTTAGCCATATATAGTTAGCGCTATT	C	2889.31	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.621;DP=656;FS=25.604;HRun=0;HaplotypeScore=455.6317;InbreedingCoeff=0.9944;MQ=89.37;MQ0=0;MQRankSum=-6.605;QD=87.55;ReadPosRankSum=1.685;VQSLOD=1.7217;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,15411	0/0:9,0:9:27.09:0,27,2696	0/0:23,0:23:66.23:0,66,4091	0/0:26,0:26:75.24:0,75,4891	1/1:3,14:17:18.06:903,18,0	0/0:25,0:25:75.23:0,75,8122	0/0:27,0:27:81.28:0,81,8812	0/0:46,0:46:99:0,138,11101	0/0:32,0:32:93.32:0,93,9045	0/0:29,0:29:84.29:0,84,8944	0/0:13,0:13:39.13:0,39,4229	0/0:21,0:21:63.22:0,63,7322	0/0:23,0:23:69.21:0,69,7109	0/0:23,0:23:66.23:0,66,6831	0/0:23,0:23:63.22:0,63,7727	0/0:21,0:21:60.21:0,60,6956	0/0:24,0:24:72.25:0,72,7725	0/0:19,0:19:54.18:0,54,5806	0/0:21,0:21:63.22:0,63,6530	0/0:13,0:13:39.12:0,39,4496	0/0:33,0:33:96.31:0,96,10520	0/0:18,0:18:54.17:0,54,4449	0/0:13,0:13:39.13:0,39,4200	0/0:34,0:34:99:0,102,11401	1/1:3,13:16:27.09:2106,27,0	0/0:22,0:22:63.22:0,63,7652	0/0:30,0:30:90.31:0,90,10496	0/0:10,0:10:30.10:0,30,2248
chr10	77210913	.	TAA	T	885.30	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.917;DP=533;FS=0.658;HRun=12;HaplotypeScore=69.7680;InbreedingCoeff=0.9876;MQ=72.12;MQ0=3;MQRankSum=0.505;QD=19.67;ReadPosRankSum=1.109;VQSLOD=2.9709;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:35:73.65:0,74,964	0/0:8,0:8:24.08:0,24,355	0/0:18,0:11:16.63:0,17,245	0/0:27,1:18:21.18:0,21,219	1/1:3,21:24:57.10:580,57,0	0/0:15,0:15:33.11:0,33,492	0/0:10,0:10:21.07:0,21,314	0/0:21,0:22:44.11:0,44,566	0/0:19,0:19:42.11:0,42,572	0/0:23,0:24:62.67:0,63,849	0/0:21,0:22:50.66:0,51,725	0/0:13,0:13:29.77:0,30,412	0/0:12,0:12:33.10:0,33,460	0/0:14,0:15:30.09:0,30,431	0/0:15,0:16:32.55:0,33,432	0/0:12,0:12:33.06:0,33,449	0/0:18,0:19:44.12:0,44,599	0/0:16,0:15:36.12:0,36,536	0/0:18,0:20:50.13:0,50,669	0/0:27,0:29:71.67:0,72,976	0/0:18,0:18:48.15:0,48,696	0/0:14,0:14:39.13:0,39,581	0/0:17,0:18:44.59:0,45,610	0/0:24,0:26:65.19:0,65,896	1/1:3,18:21:42.08:427,42,0	0/0:18,0:21:52.88:0,53,667	0/0:25,0:25:66.19:0,66,925	0/0:10,0:10:29.25:0,29,364
chr10	77211105	.	A	AT	1039.47	PASS	AB=0.964;AC=6;AF=0.107;AN=56;BaseQRankSum=8.288;DP=559;FS=3.879;HRun=6;HaplotypeScore=59.4067;InbreedingCoeff=0.6450;MQ=75.85;MQ0=0;MQRankSum=0.688;QD=14.44;ReadPosRankSum=-1.173;VQSLOD=2.8512;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,101,1037	0/0:9,0:9:27.02:0,27,260	0/1:12,1:11:36.10:36,0,64	0/1:12,0:12:6.65:7,0,52	1/1:2,31:33:74.78:828,75,0	0/0:17,0:17:47.97:0,48,462	0/0:15,0:15:42.04:0,42,407	0/0:30,0:30:69.05:0,69,654	0/0:18,0:18:54.05:0,54,526	0/0:29,0:29:84.14:0,84,832	0/0:19,0:19:48.07:0,48,471	0/0:17,0:17:45.03:0,45,446	0/0:24,0:24:68.98:0,69,656	0/0:15,0:15:42.06:0,42,417	0/0:22,0:22:66.08:0,66,640	0/0:27,0:27:72.14:0,72,723	0/0:29,1:30:49.52:0,50,811	0/0:17,0:17:39.03:0,39,380	0/0:25,0:24:57.10:0,57,567	0/0:19,0:19:48.03:0,48,464	0/0:12,0:12:27.04:0,27,265	0/0:18,0:18:48.10:0,48,483	0/0:17,0:17:39.04:0,39,379	0/0:16,0:16:45.05:0,45,439	1/1:3,11:14:24.08:302,24,0	0/0:19,0:19:57.05:0,57,561	0/0:26,0:26:72.07:0,72,695	0/0:5,0:5:15.02:0,15,145
chr10	77211599	.	TTG	T	2832.73	PASS	AB=0.854;AC=38;AF=0.731;AN=52;BaseQRankSum=-0.653;DP=737;FS=0.995;HRun=0;HaplotypeScore=166.3296;InbreedingCoeff=0.1036;MQ=52.11;MQ0=13;MQRankSum=0.532;QD=4.62;ReadPosRankSum=0.494;VQSLOD=2.9486;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:29:8.52:42,9,0	1/1:13,1:13:1.85:51,2,0	0/0:25,0:13:0.47:0,0,1	0/0:36,0:23:0:0,0,0	0/1:22,0:20:0:0,0,0	1/1:14,5:18:6.02:65,6,0	0/1:28,13:41:35.29:56,0,35	./.	1/1:21,7:29:29.88:294,30,0	0/1:33,2:34:4.50:104,0,4	1/1:17,0:17:2.95:26,3,0	1/1:14,10:25:21.01:214,21,0	1/1:15,10:25:17.41:193,17,0	1/1:16,10:26:21.02:215,21,0	1/1:16,12:29:17.88:176,18,0	0/1:13,12:26:0.83:352,0,1	1/1:21,12:35:23.89:240,24,0	0/0:9,0:9:2.84:0,3,14	./.	1/1:16,2:18:7.27:56,7,0	0/1:48,5:52:35.99:250,0,36	1/1:24,4:28:8.73:100,9,0	1/1:7,5:12:9:86,9,0	0/1:16,15:32:20.15:185,0,20	0/1:30,0:30:0.71:1,0,67	0/1:28,4:31:16.85:39,0,17	1/1:13,5:18:11.05:103,11,0	1/1:9,3:13:11.86:111,12,0
chr10	77211688	.	A	ATGTGTG	548.59	PASS	AB=0.989;AC=11;AF=0.196;AN=56;BaseQRankSum=7.583;DP=716;FS=23.982;HRun=0;HaplotypeScore=309.1813;InbreedingCoeff=-0.1301;MQ=45.69;MQ0=1;MQRankSum=-4.753;QD=1.85;ReadPosRankSum=-1.871;VQSLOD=0.8347;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:18.75:0,19,372	0/0:8,0:8:8.92:0,9,133	0/0:26,0:21:25.83:0,26,645	0/0:32,0:28:60.93:0,61,1251	0/0:28,0:28:11.57:0,12,267	1/1:19,0:19:6.22:90,6,0	0/0:34,0:34:7.11:0,7,268	0/0:37,0:37:58.10:0,58,1484	0/0:33,0:34:20.87:0,21,324	0/1:56,6:63:99:150,0,1632	0/1:27,0:26:29.62:30,0,63	0/0:24,0:24:8.24:0,8,221	0/0:20,0:21:5.11:0,5,142	0/0:25,0:25:4.56:0,5,141	0/0:24,0:25:5.49:0,5,81	0/0:26,0:27:10.79:0,11,160	0/1:22,0:22:32.30:32,0,227	0/0:7,0:7:18.06:0,18,324	0/1:12,0:13:6.26:6,0,341	0/1:45,0:45:70.94:71,0,119	0/0:18,0:18:9.02:0,9,200	0/1:39,0:39:11.24:11,0,428	0/0:13,0:13:6.02:0,6,138	0/0:21,0:21:2.46:0,2,69	0/1:24,0:23:69.35:69,0,125	0/1:34,0:34:99:214,0,1121	0/0:16,0:16:5.29:0,5,464	0/1:10,0:10:17.42:17,0,215
chr10	77213852	.	CTG	C	2503.86	PASS	AB=0.859;AC=31;AF=0.596;AN=52;BaseQRankSum=5.865;DP=618;FS=3.795;HRun=0;HaplotypeScore=79.3513;InbreedingCoeff=0.4058;MQ=57.64;MQ0=12;MQRankSum=0.177;QD=6.28;ReadPosRankSum=2.904;VQSLOD=2.9113;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:27.03:0,27,339	1/1:2,5:9:17.71:159,18,0	./.	0/0:30,0:15:0:0,0,0	./.	1/1:16,12:29:26.53:238,27,0	0/1:12,4:17:25.90:127,0,26	0/1:28,0:28:18.31:18,0,32	0/0:13,0:12:15.01:0,15,199	1/1:31,10:41:26.80:255,27,0	0/1:15,6:22:29.97:98,0,30	0/0:28,0:26:42.11:0,42,582	0/0:12,0:13:0.62:0,1,268	1/1:6,5:13:20.72:192,21,0	1/1:7,8:17:17.48:178,17,0	1/1:6,9:15:18.05:197,18,0	1/1:19,13:32:35.68:375,36,0	1/1:9,10:18:27.07:296,27,0	1/1:17,2:19:2.13:31,2,0	1/1:17,4:22:6.01:66,6,0	1/1:26,11:37:8.25:125,8,0	0/0:14,0:14:2.90:0,3,16	0/0:21,0:21:21.04:0,21,272	0/1:29,2:31:23.63:24,0,449	0/0:14,0:27:5.06:0,5,23	1/1:17,7:24:12.03:131,12,0	0/1:11,3:14:35.81:57,0,36	1/1:1,3:6:11.87:112,12,0
chr10	77214491	.	T	TG	1632.58	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.325;DP=664;FS=0.000;HRun=6;HaplotypeScore=65.8707;InbreedingCoeff=0.9980;MQ=83.81;MQ0=1;MQRankSum=-2.138;QD=32.01;ReadPosRankSum=3.464;VQSLOD=3.9572;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,1377	0/0:11,0:11:33.08:0,33,337	0/0:18,0:18:42.08:0,42,423	0/0:24,0:24:27.46:0,27,465	1/1:2,32:34:90.22:1113,90,0	0/0:24,0:24:63.14:0,63,643	0/0:25,0:25:66.13:0,66,667	0/0:31,0:31:72.13:0,72,720	0/0:24,0:24:66.15:0,66,673	0/0:36,0:36:87.16:0,87,875	0/0:30,0:30:81.16:0,81,820	0/0:20,0:20:51.09:0,51,507	0/0:19,0:19:51.11:0,51,520	0/0:15,0:15:39.08:0,39,397	0/0:11,0:11:30.07:0,30,306	0/0:16,0:16:48.11:0,48,490	0/0:20,0:20:54.12:0,54,551	0/0:24,0:24:66.15:0,66,673	0/0:23,0:23:51.04:0,51,506	0/0:39,0:39:99:0,105,1050	0/0:26,0:25:72.16:0,72,735	0/0:16,0:16:42.10:0,42,428	0/0:23,0:23:63.14:0,63,643	0/0:18,0:18:51.07:0,51,504	1/1:0,17:17:51.16:642,51,0	0/0:34,0:34:96.20:0,96,970	0/0:30,0:30:84.18:0,84,850	0/0:9,0:9:24.05:0,24,245
chr10	77215402	.	T	TA	651.45	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=7.267;DP=472;FS=9.829;HRun=11;HaplotypeScore=52.9068;InbreedingCoeff=0.9558;MQ=69.16;MQ0=0;MQRankSum=0.863;QD=19.16;ReadPosRankSum=-0.766;VQSLOD=4.0360;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.58:0,67,507	0/0:8,0:9:19.96:0,20,145	0/0:15,1:10:11.86:0,12,87	./.	1/1:3,13:16:31.16:346,31,0	0/0:15,1:15:35.85:0,36,279	0/0:18,0:18:44.82:0,45,348	0/0:22,0:25:54.05:0,54,388	0/0:16,0:17:34.89:0,35,261	0/0:19,0:19:38.84:0,39,302	0/0:16,0:16:44.78:0,45,343	0/0:15,0:16:31.89:0,32,238	0/0:16,0:17:34.88:0,35,261	0/0:11,0:12:31.92:0,32,238	0/0:18,0:18:44.81:0,45,346	0/0:18,0:18:47.81:0,48,371	0/0:23,0:24:67.78:0,68,517	0/0:24,0:24:59.75:0,60,462	0/0:24,0:24:59.72:0,60,459	0/0:13,0:15:30.92:0,31,221	0/0:12,0:12:26.89:0,27,209	0/0:7,0:7:11.95:0,12,93	0/0:12,0:12:14.91:0,15,116	0/0:15,0:15:41.84:0,42,325	1/1:3,14:17:44.84:427,45,0	0/0:24,0:24:56.74:0,57,441	0/0:20,0:20:46.79:0,47,346	0/0:8,0:10:27.98:0,28,198
chr10	77215637	.	GCTGGGGACCGAA	G	2648.71	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=7.618;DP=323;FS=5.502;HRun=0;HaplotypeScore=103.5831;InbreedingCoeff=0.8642;MQ=42.57;MQ0=28;MQRankSum=-6.713;QD=75.68;ReadPosRankSum=2.942;VQSLOD=3.2814;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:18:39.13:0,39,2149	0/0:3,0:2:6.02:0,6,375	./.	./.	1/1:3,21:24:48.16:1843,48,0	0/0:15,0:14:30.10:0,30,1811	0/0:10,0:8:21.07:0,21,1105	0/0:20,0:11:30.10:0,30,1873	0/0:7,0:7:21.07:0,21,1201	0/0:11,0:11:30.10:0,30,1836	0/0:10,0:9:24.08:0,24,1466	0/0:10,0:8:18.06:0,18,1123	0/0:5,0:4:12.04:0,12,479	0/0:13,0:11:27.01:0,27,1630	0/0:15,0:14:33.11:0,33,2010	0/0:11,0:11:30.10:0,30,1723	0/0:16,0:16:39.13:0,39,2234	0/0:10,0:9:18.06:0,18,1110	0/0:19,0:11:30.10:0,30,1488	0/0:13,0:12:30.10:0,30,1738	0/0:11,0:10:20.95:0,21,1100	0/0:2,0:2:6.02:0,6,376	0/0:13,0:13:30.06:0,30,1634	0/0:13,0:9:27.09:0,27,1647	1/1:3,8:11:24.08:925,24,0	0/0:19,0:17:51.18:0,51,3049	0/0:12,0:10:27.09:0,27,1685	0/0:5,0:5:15.05:0,15,910
chr10	77217116	.	AACAC	A	2279.02	PASS	AB=0.743;AC=29;AF=0.580;AN=50;BaseQRankSum=0.193;DP=480;FS=0.806;HRun=0;HaplotypeScore=83.3490;InbreedingCoeff=0.4820;MQ=69.49;MQ0=10;MQRankSum=-0.461;QD=8.00;ReadPosRankSum=1.217;VQSLOD=1.8552;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:28:5.49:0,5,24	0/1:9,2:13:6.92:127,0,7	./.	./.	0/0:6,0:11:11.45:0,11,74	1/1:8,10:18:6.49:94,6,0	1/1:14,5:21:17.07:195,17,0	./.	0/0:12,0:12:18.06:0,18,390	1/1:13,2:16:21.05:255,21,0	1/1:6,3:9:6.02:93,6,0	0/0:18,0:18:12.02:0,12,192	0/0:9,0:11:11.78:0,12,224	0/1:3,2:6:3.46:84,0,3	0/1:13,3:22:51.02:114,0,51	1/1:5,7:12:15.05:233,15,0	1/1:18,9:26:15.05:233,15,0	1/1:20,9:28:6.44:376,6,0	1/1:10,0:10:2.04:6,2,0	1/1:8,4:12:9.03:140,9,0	0/1:24,10:33:0.25:128,0,0	0/0:11,0:12:11.78:0,12,221	0/0:11,0:12:5.75:0,6,55	0/0:19,0:22:17.53:0,18,282	0/1:12,0:16:22.42:22,0,38	1/1:17,6:23:16.29:227,16,0	1/1:7,1:10:2.89:28,3,0	1/1:3,1:4:9:97,9,0
chr10	77217270	.	AAG	A	988.43	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.404;DP=627;FS=6.850;HRun=0;HaplotypeScore=75.0150;InbreedingCoeff=0.9577;MQ=75.74;MQ0=1;MQRankSum=-1.375;QD=26.71;ReadPosRankSum=0.094;VQSLOD=4.5933;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:96.33:0,96,1597	0/0:6,0:6:12.04:0,12,201	0/0:27,0:25:17.36:0,17,577	0/0:24,0:23:45.14:0,45,713	1/1:2,21:23:57.11:690,57,0	0/0:22,0:22:51.16:0,51,803	0/0:20,0:20:57.17:0,57,883	0/0:33,0:33:60.19:0,60,951	0/0:23,0:23:51.15:0,51,803	0/0:32,0:32:84.27:0,84,1338	0/0:23,0:23:60.18:0,60,951	0/0:18,0:18:48.11:0,48,695	0/0:18,0:18:39.12:0,39,616	0/0:16,0:16:41.29:0,41,701	0/0:22,0:22:63.20:0,63,1026	0/0:20,0:20:54.17:0,54,873	0/0:11,0:11:27.01:0,27,415	0/0:17,0:17:42.14:0,42,702	0/0:19,0:19:45.14:0,45,693	0/0:21,0:21:15.98:0,16,770	0/0:39,0:39:99:0,105,1681	0/0:23,0:23:60.17:0,60,945	0/0:27,0:27:75.26:0,75,1245	0/0:26,0:26:72.21:0,72,1137	1/1:1,13:13:33.11:420,33,0	0/0:31,0:31:75.24:0,75,1201	0/0:30,0:30:87.22:0,87,1329	0/0:4,0:4:12.04:0,12,199
chr10	77219673	.	AGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGT	A	274.20	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=2.295;DP=603;FS=7.235;HRun=0;HaplotypeScore=455.2059;InbreedingCoeff=0.6471;MQ=68.48;MQ0=23;MQRankSum=-0.258;QD=3.71;ReadPosRankSum=-0.796;VQSLOD=0.3428;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:62.08:0,62,3509	0/0:5,0:5:3.01:0,3,473	0/0:37,0:16:20.90:0,21,203	0/1:40,0:24:25.79:26,0,60	1/1:10,6:14:17.92:181,18,0	0/0:21,0:21:34.44:0,34,2967	0/0:21,0:19:27.29:0,27,1269	0/0:20,0:16:20.13:0,20,389	0/0:15,0:14:24.04:0,24,1318	0/0:21,0:21:32.09:0,32,2008	0/0:15,0:14:32.68:0,33,1217	0/0:16,0:16:39.08:0,39,3166	0/0:24,0:24:60.07:0,60,3854	0/0:18,0:16:30.09:0,30,3406	0/0:23,0:23:35.57:0,36,3203	0/0:17,0:16:36.07:0,36,2757	0/0:36,0:36:71.25:0,71,5351	0/0:24,0:24:50.63:0,51,3883	0/0:18,0:17:20.87:0,21,1211	0/0:21,0:20:32.92:0,33,2132	0/0:49,0:46:51.06:0,51,4617	0/0:21,0:21:38.97:0,39,2016	0/0:10,0:12:10.57:0,11,1306	0/0:23,0:23:45.09:0,45,3694	1/1:18,0:17:20.92:193,21,0	0/0:22,0:21:16.32:0,16,2477	0/0:14,0:13:25.51:0,26,995	0/0:3,0:3:3.01:0,3,473
chr10	77220262	.	AAT	A	548.88	PASS	AB=1.000;AC=5;AF=0.100;AN=50;BaseQRankSum=5.243;DP=277;FS=0.933;HRun=0;HaplotypeScore=39.2810;InbreedingCoeff=0.5788;MQ=79.99;MQ0=0;MQRankSum=0.086;QD=13.07;ReadPosRankSum=0.062;VQSLOD=3.2228;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39.13:0,39,683	0/0:4,0:4:12.04:0,12,210	0/0:5,0:5:5.72:0,6,52	0/1:23,0:14:24.79:25,0,40	1/1:1,7:8:21.07:284,21,0	0/0:9,0:9:24.08:0,24,420	0/0:3,0:3:6.02:0,6,105	0/0:48,0:48:99:0,129,2170	0/0:5,0:5:9.03:0,9,154	0/0:8,0:8:21.06:0,21,318	0/0:7,0:7:18.06:0,18,312	0/0:8,0:8:21.07:0,21,368	0/0:5,0:5:12.04:0,12,210	0/0:7,0:7:21.07:0,21,368	0/0:2,0:2:3.01:0,3,53	0/0:3,0:3:9.03:0,9,151	0/0:29,0:29:84.27:0,84,1436	0/0:35,0:35:99:0,102,1773	0/0:8,0:8:24.08:0,24,418	0/0:8,0:8:24.03:0,24,336	0/0:4,0:4:9.02:0,9,130	./.	./.	./.	1/1:1,10:11:27.09:365,27,0	0/0:4,0:4:12.03:0,12,159	0/0:8,0:7:24.08:0,24,401	0/0:9,0:9:24.08:0,24,421
chr10	77222130	.	TGTGTGGGGGAGGGGGGTTTCCACTG	T	737.49	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=3.341;DP=212;FS=4.384;HRun=0;HaplotypeScore=132.8186;InbreedingCoeff=0.5777;MQ=100.08;MQ0=0;MQRankSum=-3.980;QD=40.97;ReadPosRankSum=1.416;VQSLOD=2.2723;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:27.07:0,27,854	0/0:2,0:2:6.02:0,6,244	0/0:19,0:18:42.10:0,42,1080	0/0:14,0:13:16.85:0,17,572	1/1:2,4:6:3.01:104,3,0	./.	0/0:10,0:10:21.06:0,21,647	0/0:17,0:17:33.10:0,33,1043	0/0:9,0:9:24.07:0,24,596	0/0:5,0:5:9.03:0,9,325	0/0:4,0:4:9.03:0,9,316	0/0:5,0:5:12.03:0,12,444	0/0:5,0:5:15.03:0,15,406	0/0:5,0:5:9.03:0,9,527	0/0:8,0:8:24.08:0,24,795	0/0:5,0:5:12.02:0,12,281	0/0:11,0:11:30.09:0,30,775	0/0:4,0:4:9.03:0,9,420	0/0:8,0:8:12.03:0,12,345	0/0:5,0:5:12.04:0,12,440	0/0:17,0:17:42.14:0,42,1516	0/0:6,0:6:18.06:0,18,864	./.	0/0:9,0:9:24.03:0,24,758	1/1:12,0:12:27.09:740,27,0	0/0:5,0:5:12.04:0,12,380	0/0:3,0:3:3:0,3,32	0/0:1,0:1:3.01:0,3,98
chr10	77222134	.	T	TG	210.42	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=4.028;DP=208;FS=6.554;HRun=5;HaplotypeScore=34.0045;InbreedingCoeff=0.5746;MQ=100.35;MQ0=0;MQRankSum=-3.498;QD=11.69;ReadPosRankSum=0.607;VQSLOD=0.4831;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:27.05:0,27,282	0/0:2,0:2:6.02:0,6,64	0/0:21,0:20:38.56:0,39,350	0/0:12,0:11:13.32:0,13,170	1/1:5,1:6:3:26,3,0	./.	0/0:10,0:10:21.05:0,21,226	0/0:14,0:14:30.07:0,30,316	0/0:10,0:10:24.05:0,24,256	0/0:4,0:4:9.02:0,9,97	0/0:5,0:5:12.01:0,12,121	0/0:5,0:5:12.03:0,12,128	0/0:6,0:6:10.98:0,11,138	0/0:4,0:4:9.02:0,9,97	0/0:9,0:9:21.05:0,21,220	0/0:4,0:4:12.02:0,12,121	0/0:11,0:11:30.08:0,30,322	0/0:4,0:4:9.02:0,9,97	0/0:5,0:5:12.02:0,12,123	0/0:6,0:6:12.03:0,12,129	0/0:18,0:18:42.10:0,42,451	0/0:6,0:6:18.05:0,18,193	./.	0/0:9,0:9:24.02:0,24,242	1/1:4,8:12:27.04:291,27,0	0/0:5,0:5:12.03:0,12,129	0/0:4,0:4:3:0,3,32	0/0:1,0:1:3.01:0,3,32
chr10	77222145	.	GGT	G	94.14	PASS	AB=1.000;AC=5;AF=0.096;AN=52;BaseQRankSum=4.717;DP=149;FS=1.637;HRun=0;HaplotypeScore=29.9433;InbreedingCoeff=0.4518;MQ=94.48;MQ0=0;MQRankSum=-2.748;QD=4.28;ReadPosRankSum=0.666;VQSLOD=1.6370;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:24.08:0,24,452	0/0:2,0:2:6.02:0,6,120	0/0:17,0:15:43.24:0,43,539	0/1:9,0:8:1.83:2,0,254	1/1:4,1:5:3.01:30,3,0	./.	0/0:4,0:4:12.04:0,12,237	0/0:12,0:12:30.10:0,30,538	0/0:7,0:7:21.06:0,21,359	0/0:4,0:4:9.03:0,9,149	0/0:4,0:4:12.04:0,12,238	0/0:3,0:3:6.02:0,6,120	0/0:4,0:4:11.97:0,12,198	0/0:4,0:4:8.60:0,9,177	0/0:9,0:9:27.01:0,27,429	0/0:3,0:3:9.02:0,9,124	0/0:6,0:6:18.03:0,18,319	0/0:3,0:3:9.03:0,9,180	0/0:3,0:2:6.02:0,6,120	0/0:5,0:5:12.02:0,12,204	0/0:13,0:13:35.82:0,36,674	0/0:5,0:5:15.05:0,15,298	./.	0/0:6,0:6:18.06:0,18,354	1/1:0,8:8:20.68:168,21,0	0/0:3,0:3:9.03:0,9,159	0/0:1,0:1:2.90:0,3,16	0/0:1,0:1:3.01:0,3,60
chr10	77222338	.	GGGA	G	1078.23	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.061;DP=423;FS=6.432;HRun=0;HaplotypeScore=64.6971;InbreedingCoeff=0.9475;MQ=91.87;MQ0=0;MQRankSum=-2.573;QD=33.69;ReadPosRankSum=0.453;VQSLOD=3.5803;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.31:0,90,1961	0/0:10,0:10:30.10:0,30,653	0/0:30,0:30:56.38:0,56,1386	0/0:27,0:27:62.33:0,62,1249	1/1:1,17:18:51.10:760,51,0	0/0:13,0:13:39.09:0,39,823	0/0:22,0:22:66.23:0,66,1464	0/0:26,0:26:75.24:0,75,1580	0/0:10,0:10:27.08:0,27,560	0/0:8,0:8:24.08:0,24,524	0/0:10,0:10:30.09:0,30,625	0/0:15,0:15:45.15:0,45,980	0/0:9,0:9:27.08:0,27,554	0/0:5,0:5:9.03:0,9,201	0/0:12,0:12:36.12:0,36,804	0/0:11,0:11:33.10:0,33,696	0/0:17,0:17:48.16:0,48,1072	0/0:19,0:19:54.17:0,54,1161	0/0:10,0:10:30.10:0,30,625	0/0:7,0:7:21.07:0,21,468	0/0:35,0:35:99:0,105,2340	0/0:10,0:10:24.08:0,24,536	0/0:14,0:14:39.13:0,39,845	0/0:10,0:10:30.10:0,30,670	1/1:3,11:14:27.09:439,27,0	0/0:15,0:15:42.14:0,42,938	0/0:8,0:7:21.07:0,21,469	0/0:5,0:5:12.04:0,12,268
chr10	77223525	.	A	AAGAT	4395.25	PASS	AB=0.764;AC=16;AF=0.333;AN=48;BaseQRankSum=-8.573;DP=628;FS=2.684;HRun=0;HaplotypeScore=121.5616;InbreedingCoeff=0.7184;MQ=60.43;MQ0=4;MQRankSum=2.601;QD=17.94;ReadPosRankSum=-3.019;VQSLOD=4.3135;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,1:28:3:42,3,0	0/0:6,0:12:12.01:0,12,112	./.	./.	1/1:18,13:31:16.23:861,16,0	0/0:16,0:16:33.09:0,33,459	./.	./.	0/0:20,0:20:18.05:0,18,252	0/0:16,0:30:26.38:0,26,226	0/0:19,0:32:14.27:0,14,43	0/0:8,0:8:15.05:0,15,227	0/0:20,0:20:12.04:0,12,180	0/0:7,0:11:6.01:0,6,56	0/0:3,0:18:27.01:0,27,246	0/0:12,0:20:27:0,27,245	0/0:16,0:16:21.03:0,21,273	0/0:11,0:23:24.03:0,24,224	1/1:21,1:29:27.06:394,27,0	1/1:20,13:34:39.13:877,39,0	0/1:26,6:32:99:251,0,173	0/0:33,0:33:42.12:0,42,595	0/0:23,0:23:33.07:0,33,450	0/0:10,0:10:9.01:0,9,115	1/1:15,6:20:12.04:278,12,0	1/1:12,8:22:30.08:582,30,0	0/1:19,15:35:45.87:840,0,46	1/1:10,3:12:12.04:271,12,0
chr10	77223835	.	CTACA	C	6470.62	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=3.682;DP=583;FS=8.835;HRun=0;HaplotypeScore=113.1068;InbreedingCoeff=0.7530;MQ=70.89;MQ0=5;MQRankSum=-2.274;QD=14.84;ReadPosRankSum=0.678;VQSLOD=4.0045;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,31:34:33.11:599,33,0	1/1:1,5:6:6.02:109,6,0	0/0:16,0:9:17.10:0,17,190	0/0:21,0:18:27.74:0,28,358	1/1:3,23:26:33.04:556,33,0	1/1:3,22:25:18.06:327,18,0	1/1:1,12:13:6.02:109,6,0	1/1:31,0:31:63.87:549,64,0	0/0:15,0:15:38.97:0,39,397	0/1:39,0:39:99:309,0,671	0/1:28,0:28:99:242,0,493	0/0:26,0:26:57.02:0,57,749	0/0:14,0:14:27.02:0,27,388	1/1:3,10:13:9.03:163,9,0	1/1:1,13:14:24.08:436,24,0	1/1:2,9:11:9.03:163,9,0	1/1:4,25:29:23.67:387,24,0	1/1:11,0:10:5.61:48,6,0	1/1:24,0:24:60:561,60,0	1/1:34,0:33:35.78:352,36,0	1/1:16,0:16:26.91:217,27,0	0/0:17,0:16:39.02:0,39,437	0/0:22,0:22:47.60:0,48,717	0/0:16,0:16:29.73:0,30,438	1/1:0,17:17:18.06:327,18,0	1/1:19,0:19:53.06:511,53,0	1/1:34,0:34:36.06:432,36,0	1/1:11,0:11:6.02:75,6,0
chr10	77223838	.	CATACATAG	C	5041.91	PASS	AB=0.989;AC=19;AF=0.339;AN=56;BaseQRankSum=-2.959;DP=576;FS=3.743;HRun=0;HaplotypeScore=150.3881;InbreedingCoeff=0.6688;MQ=70.43;MQ0=4;MQRankSum=1.370;QD=18.33;ReadPosRankSum=-0.276;VQSLOD=4.3173;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:31.93:0,32,177	0/0:5,0:5:5.81:0,6,32	0/0:15,0:8:17.10:0,17,190	0/0:21,0:18:27.74:0,28,358	0/0:25,0:25:14.10:0,14,145	0/0:24,0:24:17.35:0,17,95	0/0:12,0:12:5.81:0,6,32	1/1:2,0:33:51.18:532,51,0	0/0:16,0:16:38.97:0,39,501	0/1:42,0:42:99:286,0,1893	0/1:28,0:28:99:217,0,1142	0/0:25,0:25:57.05:0,57,1188	0/0:15,0:15:27.02:0,27,566	0/0:13,0:13:8.18:0,8,40	0/0:13,0:13:23.22:0,23,128	0/0:10,0:10:8.71:0,9,48	0/1:28,1:29:73.33:84,0,73	1/1:1,9:10:5.81:97,6,0	1/1:1,20:21:60.01:771,60,0	1/1:2,31:32:36.12:805,36,0	1/1:13,2:15:17.85:223,18,0	0/0:17,0:16:39.03:0,39,672	0/0:22,0:22:47.64:0,48,1276	0/0:17,0:17:29.64:0,30,673	0/0:17,0:17:17.42:0,17,96	1/1:0,18:18:54.06:897,54,0	1/1:1,34:35:36.12:961,36,0	1/1:1,10:11:6.02:168,6,0
chr10	77223842	.	C	CATAG	1843.34	PASS	AB=1.000;AC=16;AF=0.320;AN=50;BaseQRankSum=-7.486;DP=581;FS=1.498;HRun=0;HaplotypeScore=134.5572;InbreedingCoeff=0.6705;MQ=68.74;MQ0=6;MQRankSum=1.994;QD=9.96;ReadPosRankSum=-2.703;VQSLOD=2.2232;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:36.06:0,36,355	0/0:5,0:5:6.01:0,6,60	./.	./.	0/0:24,0:24:26.85:0,27,248	0/0:22,0:22:18.04:0,18,181	0/0:13,0:13:9:0,9,84	./.	1/1:11,5:17:6.02:140,6,0	0/1:42,0:42:93.03:93,0,387	0/0:29,0:29:17.97:0,18,335	1/1:14,12:27:18.06:420,18,0	1/1:6,8:14:9.03:210,9,0	0/0:11,0:11:12.01:0,12,115	0/0:14,0:14:27.04:0,27,265	0/0:9,0:9:9.02:0,9,91	0/0:30,0:30:7.11:0,7,191	1/1:10,0:10:0.72:2,1,0	0/0:20,0:20:11.73:0,12,86	0/0:32,0:31:20.52:0,21,176	0/0:14,0:14:2.99:0,3,24	1/1:8,9:16:15.05:302,15,0	1/1:10,15:28:24.08:561,24,0	1/1:10,8:20:12.04:281,12,0	0/0:19,0:19:21.03:0,21,205	0/0:19,0:18:12.70:0,13,124	0/0:34,0:34:32.40:0,32,284	0/1:10,0:10:2.20:2,0,22
chr10	77224257	.	CA	C	1172.43	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.381;DP=674;FS=6.489;HRun=8;HaplotypeScore=74.2649;InbreedingCoeff=0.9971;MQ=85.56;MQ0=0;MQRankSum=0.005;QD=22.55;ReadPosRankSum=-0.316;VQSLOD=3.9271;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,105,1233	0/0:10,0:10:30.09:0,30,362	0/0:32,0:31:48.70:0,49,638	0/0:19,0:19:21.41:0,21,360	1/1:6,29:35:90.12:860,90,0	0/0:26,0:26:72.22:0,72,870	0/0:11,0:11:33.10:0,33,398	0/0:29,0:29:81.24:0,81,969	0/0:21,0:21:54.17:0,54,652	0/0:29,0:29:84.22:0,84,991	0/0:21,0:21:54.16:0,54,644	0/0:22,0:22:48.09:0,48,562	0/0:25,0:25:63.19:0,63,759	0/0:26,0:26:72.13:0,72,839	0/0:32,0:32:90.28:0,90,1087	0/0:24,0:24:72.22:0,72,870	0/0:23,0:23:66.20:0,66,797	0/0:13,0:13:36.11:0,36,435	0/0:19,0:19:48.13:0,48,560	0/0:33,0:33:87.25:0,87,1032	0/0:33,0:33:87.23:0,87,1018	0/0:24,0:24:63.19:0,63,751	0/0:22,0:22:54.17:0,54,652	0/0:26,0:26:78.24:0,78,942	1/1:0,17:17:45.07:435,45,0	0/0:26,0:26:69.21:0,69,834	0/0:27,0:27:75.23:0,75,906	0/0:10,0:10:27.08:0,27,326
chr10	77224904	.	GCACA	G	4340.34	PASS	AB=0.763;AC=32;AF=0.615;AN=52;BaseQRankSum=2.852;DP=618;FS=1.096;HRun=0;HaplotypeScore=114.4108;InbreedingCoeff=0.4460;MQ=61.32;MQ0=7;MQRankSum=-1.462;QD=11.30;ReadPosRankSum=-1.283;VQSLOD=4.3656;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:50:27.56:0,28,464	1/1:2,0:5:8.89:64,9,0	./.	./.	0/0:23,0:22:14.95:0,15,165	1/1:6,11:20:30.08:401,30,0	1/1:14,6:22:21.06:286,21,0	0/1:21,3:24:7.95:106,0,8	0/1:11,2:13:28.99:29,0,285	1/1:20,4:25:15.04:213,15,0	1/1:6,2:8:6.02:94,6,0	0/0:19,0:19:1.81:0,2,858	0/1:13,1:17:14.73:15,0,418	1/1:9,11:21:21.07:329,21,0	1/1:11,9:23:30.08:413,30,0	1/1:10,12:22:36.12:560,36,0	0/1:15,13:32:65.39:410,0,65	0/1:7,9:16:56.29:170,0,56	1/1:14,3:17:8.94:133,9,0	1/1:7,0:7:6.48:58,6,0	0/1:32,19:51:2.03:248,0,2	0/0:14,0:16:23.44:0,23,394	0/0:15,0:15:12.51:0,13,283	0/0:41,0:43:74.44:0,74,1450	0/0:11,0:11:8.98:0,9,125	1/1:18,8:27:14.49:275,14,0	1/1:13,6:19:24.52:319,25,0	1/1:5,8:14:15.04:216,15,0
chr10	77224945	.	CAG	C	408.25	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=2.760;DP=671;FS=12.840;HRun=0;HaplotypeScore=115.2778;InbreedingCoeff=0.7588;MQ=58.65;MQ0=14;MQRankSum=3.144;QD=4.49;ReadPosRankSum=0.412;VQSLOD=2.2383;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:45.03:0,45,474	0/0:7,0:7:13.54:0,14,103	0/0:42,0:20:51.91:0,52,470	0/0:33,0:11:26.83:0,27,211	1/1:20,2:21:21:220,21,0	0/0:26,0:25:51.52:0,52,318	0/0:21,0:21:44.62:0,45,313	0/0:19,0:19:39.37:0,39,343	0/0:19,0:19:44.54:0,45,437	0/0:20,0:19:49.97:0,50,383	0/0:10,0:10:29.32:0,29,219	0/0:33,0:33:90.96:0,91,1109	0/0:18,0:18:19.13:0,19,368	0/0:24,0:24:50.36:0,50,323	0/0:27,0:26:58.98:0,59,385	0/0:21,0:21:52.12:0,52,291	0/0:39,0:38:63.07:0,63,534	0/0:22,0:21:37.09:0,37,242	0/0:13,0:13:32.55:0,33,259	0/0:16,0:16:33.41:0,33,274	0/1:57,0:57:99:153,0,372	0/0:13,0:13:19.04:0,19,371	0/0:14,0:14:32.97:0,33,378	0/0:44,0:44:74.49:0,74,1252	1/1:10,2:12:17.98:163,18,0	0/0:30,0:30:68.73:0,69,611	0/0:26,0:24:69.26:0,69,493	0/0:12,0:11:18.10:0,18,93
chr10	77225223	.	T	TTATGTATTTATG	1569.48	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=0.243;DP=294;FS=1.009;HRun=0;HaplotypeScore=95.6375;InbreedingCoeff=0.7065;MQ=56.84;MQ0=0;MQRankSum=-1.967;QD=36.50;ReadPosRankSum=0.379;VQSLOD=3.2638;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:27.06:0,27,380	0/0:6,0:6:18.04:0,18,492	0/0:5,0:4:6.01:0,6,57	0/0:6,0:4:6.02:0,6,98	1/1:1,21:28:38.95:1493,39,0	0/0:13,0:13:36.11:0,36,1260	0/0:3,0:3:9.02:0,9,252	0/0:31,0:30:81.23:0,81,1853	0/0:5,0:5:15.04:0,15,420	0/0:8,0:8:21.06:0,21,509	0/0:10,0:10:27.07:0,27,698	0/0:7,0:7:21.07:0,21,609	0/0:5,0:5:15.03:0,15,334	0/0:5,0:5:15.03:0,15,391	0/0:4,0:4:12.03:0,12,279	0/0:4,0:4:12.02:0,12,166	0/0:25,0:25:69.19:0,69,2012	0/0:17,0:17:42.06:0,42,1020	0/0:23,0:23:63.19:0,63,1323	0/0:7,0:7:21.04:0,21,369	0/0:11,0:11:27.04:0,27,653	0/0:3,0:3:9.01:0,9,108	./.	./.	1/1:0,11:15:3.01:184,3,0	0/0:17,0:17:45.14:0,45,1158	0/0:8,0:8:21.06:0,21,586	0/0:18,0:17:43.62:0,44,808
chr10	77226923	.	ACCAAC	A	601	PASS	AC=4;AF=0.50;AN=8;BaseQRankSum=0.971;DP=26;FS=0.000;HRun=0;HaplotypeScore=178.0843;MQ=75.43;MQ0=0;MQRankSum=-0.857;QD=28.62;ReadPosRankSum=0.286;VQSLOD=3.1529;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:3,0:2:1.04:0,1,50	./.	1/1:6,2:8:20.81:181,21,0	0/0:1,0:1:3.01:0,3,34	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:3,10:13:35.98:497,36,0	./.	./.	./.
chr10	77226940	.	AAACCC	A	521.03	PASS	AC=4;AF=0.40;AN=10;BaseQRankSum=2.598;DP=22;FS=5.798;HRun=0;HaplotypeScore=121.7332;MQ=111.17;MQ0=0;MQRankSum=-1.938;QD=34.74;ReadPosRankSum=1.278;VQSLOD=3.4386;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:4,0:3:8.81:0,9,101	0/0:2,0:1:3.01:0,3,34	1/1:2,2:4:11.87:125,12,0	0/0:1,0:1:3.01:0,3,43	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:1,10:11:28.93:479,29,0	./.	./.	./.
chr10	77227494	.	CAAACAAAACA	C	1613.55	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.954;DP=467;FS=31.691;HRun=0;HaplotypeScore=135.7940;InbreedingCoeff=0.9632;MQ=68.46;MQ0=2;MQRankSum=-6.366;QD=52.05;ReadPosRankSum=0.863;VQSLOD=1.7628;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.30:0,87,4027	0/0:7,0:7:21.07:0,21,966	0/0:16,0:16:42.14:0,42,1638	0/0:24,0:22:54.15:0,54,2137	1/1:1,15:16:27.09:786,27,0	0/0:21,0:21:60.21:0,60,2787	0/0:17,0:17:45.14:0,45,2062	0/0:21,0:21:60.20:0,60,2314	0/0:11,0:11:30.10:0,30,1390	0/0:20,0:20:60.21:0,60,2816	0/0:24,0:24:69.24:0,69,3439	0/0:14,0:14:39.13:0,39,1972	0/0:12,0:12:36.12:0,36,1858	0/0:5,0:5:12.04:0,12,561	0/0:10,0:10:30.10:0,30,1471	0/0:9,0:9:27.09:0,27,1326	0/0:42,0:42:99:0,117,5551	0/0:14,0:14:36.12:0,36,1652	0/0:8,0:8:24.08:0,24,1195	0/0:9,0:9:24.08:0,24,1206	0/0:19,0:19:51.16:0,51,2356	0/0:18,0:18:51.18:0,51,2507	0/0:15,0:15:45.14:0,45,2167	0/0:16,0:16:45.15:0,45,2196	1/1:1,14:15:30.10:948,30,0	0/0:23,0:23:60.19:0,60,2866	0/0:25,0:25:75.26:0,75,3813	0/0:5,0:5:12.04:0,12,592
chr10	77227610	.	GA	G	1438.04	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.945;DP=597;FS=7.154;HRun=3;HaplotypeScore=53.4371;InbreedingCoeff=0.9975;MQ=75.57;MQ0=0;MQRankSum=-2.654;QD=28.20;ReadPosRankSum=2.047;VQSLOD=2.4658;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.30:0,93,1316	0/0:7,0:7:21.07:0,21,300	0/0:22,0:20:60.20:0,60,852	0/0:20,0:16:45.15:0,45,644	1/1:1,27:28:78.25:965,78,0	0/0:24,0:24:72.24:0,72,1031	0/0:28,0:28:78.18:0,78,1046	0/0:28,0:28:78.25:0,78,1092	0/0:18,0:18:51.17:0,51,734	0/0:23,0:23:69.23:0,69,994	0/0:17,0:17:48.16:0,48,691	0/0:20,0:20:51.17:0,51,734	0/0:25,0:25:75.24:0,75,1061	0/0:12,0:12:36.11:0,36,502	0/0:26,0:26:78.26:0,78,1123	0/0:21,0:21:63.20:0,63,891	0/0:27,0:27:78.25:0,78,1099	0/0:13,0:12:33.05:0,33,433	0/0:17,0:17:51.14:0,51,698	0/0:16,0:16:48.16:0,48,691	0/0:23,0:23:69.23:0,69,991	0/0:17,0:17:42.12:0,42,571	0/0:13,0:13:36.08:0,36,494	0/0:11,0:11:33.11:0,33,475	1/1:2,21:22:48.15:594,48,0	0/0:27,0:27:75.25:0,75,1079	0/0:31,0:31:90.30:0,90,1294	0/0:28,0:28:84.21:0,84,1116
chr10	77227746	.	T	TG	1444.82	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.515;DP=637;FS=1.339;HRun=1;HaplotypeScore=67.3512;InbreedingCoeff=0.9678;MQ=87.96;MQ0=0;MQRankSum=-6.121;QD=33.60;ReadPosRankSum=-2.040;VQSLOD=2.8919;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1519	0/0:7,0:7:21.07:0,21,273	0/0:25,0:25:69.03:0,69,832	0/0:21,0:21:51.14:0,51,598	1/1:0,22:22:54.14:783,54,0	0/0:22,0:22:66.20:0,66,843	0/0:29,0:29:78.24:0,78,998	0/0:33,0:33:99:0,99,1274	0/0:24,0:24:66.20:0,66,842	0/0:19,0:19:57.18:0,57,731	0/0:8,0:8:24.06:0,24,298	0/0:16,0:16:48.16:0,48,623	0/0:25,0:25:72.23:0,72,935	0/0:24,0:24:72.23:0,72,935	0/0:26,0:26:78.23:0,78,985	0/0:20,0:20:60.20:0,60,779	0/0:31,0:31:93.28:0,93,1191	0/0:22,0:22:46.85:0,47,693	0/0:16,0:16:48.15:0,48,611	0/0:20,0:20:57.17:0,57,726	0/0:45,0:45:99:0,129,1675	0/0:16,0:16:48.16:0,48,623	0/0:15,0:15:42.14:0,42,541	0/0:32,0:32:90.29:0,90,1169	1/1:0,21:20:54.14:783,54,0	0/0:21,0:21:60.19:0,60,779	0/0:35,0:35:99:0,105,1334	0/0:3,0:3:9.03:0,9,117
chr10	77228037	.	A	ATGG	1204.59	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=4.246;DP=648;FS=1.728;HRun=0;HaplotypeScore=87.8175;InbreedingCoeff=0.9397;MQ=55.37;MQ0=21;MQRankSum=-5.643;QD=32.56;ReadPosRankSum=-1.222;VQSLOD=3.2915;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,157,2569	0/0:7,0:7:21.07:0,21,340	./.	0/0:18,0:2:6.02:0,6,100	1/1:5,12:16:24.08:504,24,0	0/0:14,0:14:42.14:0,42,694	0/0:18,1:18:48.14:0,48,750	0/0:30,0:30:75.24:0,75,1207	0/0:28,0:28:75.26:0,75,1249	0/0:20,0:20:51.17:0,51,847	0/0:17,0:17:48.16:0,48,800	0/0:18,0:18:54.17:0,54,875	0/0:23,0:23:63.22:0,63,1045	0/0:13,0:13:36.12:0,36,599	0/0:29,0:29:84.29:0,84,1399	0/0:15,0:15:39.12:0,39,625	0/0:33,0:33:70.33:0,70,1416	0/0:25,0:25:63.22:0,63,1049	0/0:16,0:14:36.12:0,36,600	0/0:34,0:34:87.30:0,87,1443	0/0:48,0:48:99:0,138,2260	0/0:26,0:26:75.22:0,75,1193	0/0:28,0:28:81.28:0,81,1344	0/0:21,0:21:63.20:0,63,1017	1/1:5,15:18:39.12:821,39,0	0/0:31,0:31:93.31:0,93,1520	0/0:25,0:25:18.21:0,18,1040	0/0:7,0:7:21.07:0,21,350
chr10	77228092	.	ACAT	A	1979.31	PASS	AB=0.938;AC=5;AF=0.089;AN=56;BaseQRankSum=10.311;DP=721;FS=8.283;HRun=0;HaplotypeScore=105.6801;InbreedingCoeff=0.8304;MQ=79.50;MQ0=0;MQRankSum=-2.782;QD=26.04;ReadPosRankSum=3.199;VQSLOD=3.5623;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.33:0,96,2116	0/0:6,0:6:15.05:0,15,335	0/0:30,0:29:78.27:0,78,1702	0/0:23,0:23:57.19:0,57,1222	1/1:3,29:31:72.25:1170,72,0	0/0:17,0:17:51.18:0,51,1120	0/0:18,0:18:54.19:0,54,1200	0/0:36,0:36:99:0,105,2315	0/0:34,0:34:99:0,102,2255	0/0:28,0:28:81.28:0,81,1807	0/0:17,0:17:45.15:0,45,1003	0/0:28,0:28:81.28:0,81,1806	0/0:24,0:24:66.23:0,66,1473	0/0:19,0:19:57.20:0,57,1252	0/0:32,0:32:90.31:0,90,1989	0/0:15,0:15:45.15:0,45,1005	0/0:25,0:25:66.23:0,66,1473	0/0:22,0:22:63.22:0,63,1400	0/0:20,0:20:51.18:0,51,1126	0/0:36,0:36:99:0,105,2327	0/0:43,0:43:99:0,123,2737	0/0:32,0:32:93.31:0,93,2020	0/0:30,0:30:90.30:0,90,1944	0/0:25,0:25:75.26:0,75,1670	1/1:1,28:29:57.19:930,57,0	0/0:27,0:27:81.28:0,81,1791	0/0:23,0:23:69.24:0,69,1535	0/1:14,1:15:3.78:4,0,843
chr10	77228389	.	CTCTA	C	1693.95	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.515;DP=680;FS=9.383;HRun=0;HaplotypeScore=121.9468;InbreedingCoeff=0.9958;MQ=79.61;MQ0=0;MQRankSum=-9.548;QD=39.39;ReadPosRankSum=-1.621;VQSLOD=3.2925;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,3320	0/0:15,0:15:39.13:0,39,1053	0/0:17,0:17:48.16:0,48,1184	0/0:17,0:17:44.96:0,45,916	1/1:0,25:25:57.15:1024,57,0	0/0:23,0:23:63.22:0,63,1699	0/0:23,0:23:63.22:0,63,1665	0/0:22,0:22:66.23:0,66,1780	0/0:29,0:29:75.26:0,75,2024	0/0:37,0:37:99:0,111,2846	0/0:20,0:20:57.20:0,57,1455	0/0:25,0:25:75.26:0,75,1950	0/0:24,0:24:72.25:0,72,1944	0/0:18,0:18:54.17:0,54,1350	0/0:32,0:32:93.32:0,93,2455	0/0:19,0:19:54.19:0,54,1425	0/0:29,0:29:87.30:0,87,2338	0/0:14,0:14:39.13:0,39,980	0/0:21,0:21:63.22:0,63,1696	0/0:29,0:29:81.28:0,81,2146	0/0:37,0:37:99:0,108,2875	0/0:27,0:27:81.28:0,81,2120	0/0:22,0:22:66.23:0,66,1779	0/0:24,0:24:69.19:0,69,1764	1/1:2,16:18:48.04:791,48,0	0/0:37,0:36:99:0,108,2916	0/0:26,0:25:78.27:0,78,2047	0/0:6,0:6:18.06:0,18,485
chr10	77228763	.	AC	A	1345.70	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.880;DP=622;FS=7.592;HRun=2;HaplotypeScore=61.9000;InbreedingCoeff=0.9996;MQ=79.44;MQ0=0;MQRankSum=-1.738;QD=33.64;ReadPosRankSum=2.788;VQSLOD=3.6546;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.30:0,87,1391	0/0:14,0:14:42.14:0,42,667	0/0:17,0:17:38.64:0,39,609	0/0:15,0:14:42.04:0,42,586	1/1:0,23:23:63.21:881,63,0	0/0:13,0:13:39.13:0,39,621	0/0:29,0:29:87.25:0,87,1334	0/0:24,0:24:69.22:0,69,1081	0/0:25,0:25:75.21:0,75,1138	0/0:27,0:27:81.27:0,81,1273	0/0:25,0:25:72.25:0,72,1145	0/0:21,0:21:63.21:0,63,1007	0/0:16,0:16:48.16:0,48,764	0/0:24,0:24:72.23:0,72,1117	0/0:24,0:24:72.25:0,72,1149	0/0:22,0:22:66.21:0,66,1032	0/0:28,0:28:81.28:0,81,1295	0/0:15,0:15:45.15:0,45,715	0/0:23,0:23:66.22:0,66,1040	0/0:26,0:26:78.27:0,78,1246	0/0:50,0:50:99:0,150,2346	0/0:16,0:16:48.15:0,48,744	0/0:15,0:15:45.14:0,45,693	0/0:32,0:32:96.33:0,96,1535	1/1:0,17:17:42.14:587,42,0	0/0:24,0:24:72.25:0,72,1151	0/0:16,0:16:48.16:0,48,765	0/0:10,0:10:30.10:0,30,480
chr10	77229344	.	CGACT	C	1072.27	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.639;DP=440;FS=0.000;HRun=0;HaplotypeScore=92.1347;InbreedingCoeff=0.8807;MQ=78.76;MQ0=2;MQRankSum=-6.663;QD=28.98;ReadPosRankSum=3.719;VQSLOD=3.1300;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:72.25:0,72,1738	0/0:5,0:5:15.05:0,15,339	0/0:25,0:23:46.01:0,46,961	0/0:15,0:10:8.75:0,9,193	1/1:4,13:17:33.11:574,33,0	0/0:15,0:15:45.15:0,45,1142	0/0:13,0:13:36.12:0,36,909	0/0:25,0:25:60.19:0,60,1416	0/0:11,0:11:30.09:0,30,673	0/0:30,0:30:81.27:0,81,1984	0/0:10,0:10:24.08:0,24,615	0/0:16,0:16:39.13:0,39,994	0/0:3,0:3:9.03:0,9,226	0/0:7,0:7:18.06:0,18,453	0/0:3,0:3:6.02:0,6,154	0/0:11,0:11:30.10:0,30,701	0/0:20,0:20:48.16:0,48,1232	0/0:7,0:7:21.07:0,21,539	0/0:22,0:22:48.15:0,48,1117	0/0:17,0:17:48.15:0,48,1156	0/0:22,0:22:39.13:0,39,888	0/0:11,0:11:27.08:0,27,603	0/0:14,0:14:36.11:0,36,831	0/0:16,0:16:33.11:0,33,809	1/1:5,15:20:36.12:619,36,0	0/0:21,0:21:57.19:0,57,1392	0/0:14,0:14:33.10:0,33,755	0/0:15,0:15:42.14:0,42,1027
chr10	77229363	.	CTTTTCTTTTTTTTTT	C	1776.92	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.344;DP=510;FS=0.000;HRun=0;HaplotypeScore=210.4577;InbreedingCoeff=0.9335;MQ=58.45;MQ0=7;MQRankSum=-5.318;QD=63.46;ReadPosRankSum=3.747;VQSLOD=3.1960;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:93.31:0,93,4686	0/0:7,0:7:18.06:0,18,1078	0/0:32,0:18:32.24:0,32,709	0/0:16,0:3:5.49:0,5,76	1/1:7,7:14:38.79:808,39,0	0/0:18,0:18:39.12:0,39,1935	0/0:19,0:17:45.13:0,45,2019	0/0:22,0:22:52.29:0,52,1500	0/0:16,0:16:39.09:0,39,1580	0/0:26,0:26:72.24:0,72,3276	0/0:20,0:20:60.14:0,60,2260	0/0:23,0:23:69.21:0,69,2943	0/0:12,0:12:36.12:0,36,1594	0/0:8,0:8:18.03:0,18,711	0/0:12,0:12:33.05:0,33,1562	0/0:13,0:13:36.12:0,36,1944	0/0:25,0:25:68.78:0,69,2889	0/0:21,0:20:54.06:0,54,2545	0/0:26,0:25:63.20:0,63,2541	0/0:17,0:17:48.16:0,48,2135	0/0:11,0:11:27.06:0,27,914	0/0:10,0:10:27.05:0,27,925	0/0:18,0:19:42.13:0,42,1985	0/0:16,0:16:33:0,33,1682	1/1:5,9:14:36.03:1091,36,0	0/0:24,0:24:57.11:0,57,2052	0/0:21,0:21:57.18:0,57,2842	0/0:10,0:9:24.08:0,24,805
chr10	77230776	.	T	TTTACTTAC	14307.34	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-4.476;DP=667;FS=0.439;HRun=0;HaplotypeScore=158.7262;InbreedingCoeff=0.9439;MQ=57.26;MQ0=3;MQRankSum=-9.736;QD=33.43;ReadPosRankSum=-5.745;VQSLOD=3.5246;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,9:37:30.10:1010,30,0	1/1:7,5:13:21.96:806,22,0	0/0:14,0:12:6.02:0,6,122	0/0:13,0:12:9.02:0,9,111	0/0:8,0:19:35.62:0,36,595	1/1:18,10:30:30.10:1224,30,0	1/1:17,2:21:9.03:309,9,0	1/1:35,0:35:27.08:472,27,0	0/0:34,0:34:81.26:0,81,1871	1/1:17,7:25:29.98:1054,30,0	1/1:13,10:23:27.09:1005,27,0	0/0:33,0:33:57.20:0,57,1415	0/0:23,0:23:51.16:0,51,1144	1/1:10,10:21:27.09:1097,27,0	1/1:13,9:24:30.10:1165,30,0	1/1:14,6:26:24.08:889,24,0	1/1:13,8:23:15.05:612,15,0	1/1:18,2:24:12.04:487,12,0	1/1:13,2:16:12.91:338,13,0	1/1:13,9:22:24.08:873,24,0	1/1:17,0:17:12.01:219,12,0	0/0:31,0:31:48.16:0,48,1136	0/0:24,0:24:45.14:0,45,1009	0/0:31,0:31:51.16:0,51,1223	0/0:9,0:16:18.06:0,18,306	1/1:22,14:39:54.14:1603,54,0	1/1:15,4:23:24.08:801,24,0	1/1:9,0:8:12.04:344,12,0
chr10	77233780	.	GCA	G	391.98	PASS	AB=0.935;AC=12;AF=0.222;AN=54;BaseQRankSum=2.821;DP=519;FS=14.942;HRun=0;HaplotypeScore=86.9872;InbreedingCoeff=0.0897;MQ=57.60;MQ0=22;MQRankSum=1.020;QD=2.24;ReadPosRankSum=2.245;VQSLOD=0.6451;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:10.34:61,10,0	0/0:8,1:9:3.26:0,3,161	0/0:26,0:14:0.47:0,0,1	./.	0/0:15,0:15:5.99:0,6,49	0/0:15,0:14:17.94:0,18,181	0/0:33,0:30:6.23:0,6,374	0/0:19,0:18:19.28:0,19,195	0/1:9,0:9:11.34:11,0,116	1/1:12,0:11:9.34:61,9,0	0/1:8,8:16:3.61:27,0,4	0/0:14,0:14:12.48:0,12,139	0/0:8,0:8:9.50:0,9,120	0/1:13,1:14:69.71:70,0,90	0/0:15,0:15:2.83:0,3,143	0/1:13,0:13:73.95:74,0,112	0/0:19,0:19:21.90:0,22,408	0/1:20,0:20:49.33:49,0,175	0/0:15,0:14:14.91:0,15,151	0/1:9,1:10:15.81:16,0,137	0/0:45,0:37:39.96:0,40,466	0/0:23,0:22:18.02:0,18,218	0/0:11,1:11:10.28:0,10,143	0/1:37,1:37:99:149,0,362	0/0:17,0:17:11.83:0,12,89	0/1:18,0:18:23.11:23,0,223	0/0:21,0:21:26.85:0,27,330	0/0:10,0:9:9.02:0,9,105
chr10	77233812	.	ACG	A	796.10	PASS	AB=0.975;AC=23;AF=0.426;AN=54;BaseQRankSum=6.176;DP=480;FS=3.496;HRun=0;HaplotypeScore=85.0605;InbreedingCoeff=-0.1982;MQ=49.75;MQ0=23;MQRankSum=-0.974;QD=2.21;ReadPosRankSum=-1.196;VQSLOD=1.1618;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,5:26:39.64:242,40,0	0/1:8,0:8:9.29:9,0,88	./.	0/0:3,0:1:2.92:0,3,17	1/1:2,8:10:2.94:18,3,0	0/0:15,0:15:1.94:0,2,125	0/1:35,0:30:13.20:13,0,272	0/0:15,2:15:0.02:0,0,142	0/1:9,0:9:24.65:25,0,85	0/1:4,6:9:1.98:67,0,2	1/1:10,0:10:2.35:8,2,0	0/0:14,0:14:18.78:0,19,184	0/1:10,0:10:8.49:8,0,107	0/1:17,0:17:42.76:43,0,76	0/1:16,0:16:44.29:44,0,97	0/1:10,0:10:2.82:3,0,113	0/0:22,5:26:49.22:0,49,421	0/1:26,0:26:52.09:52,0,200	0/0:15,0:13:14.58:0,15,149	0/1:11,0:11:26:26,0,62	0/1:57,0:50:19.66:20,0,332	0/0:13,5:17:17.77:0,18,154	0/1:12,0:11:8.96:9,0,46	0/1:37,0:36:66.66:67,0,302	1/1:14,0:14:23.65:184,24,0	0/1:21,0:20:82.22:105,0,82	0/1:19,0:19:9.22:9,0,297	0/0:7,0:4:8.58:0,9,44
chr10	77233830	.	A	ACG	277	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=2.888;DP=468;FS=1.012;HRun=0;HaplotypeScore=75.5882;InbreedingCoeff=0.5490;MQ=52.24;MQ0=23;MQRankSum=0.309;QD=8.15;ReadPosRankSum=-0.281;VQSLOD=3.0452;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,5:17:26.77:370,27,0	0/0:6,0:6:16.54:0,17,146	0/1:14,0:2:0.89:1,0,13	0/0:22,0:14:32.15:0,32,330	0/0:6,0:6:5.94:0,6,42	0/0:16,0:16:33.74:0,34,322	0/0:28,0:25:59.89:0,60,632	0/0:15,0:13:30.21:0,30,394	0/0:12,0:12:26.94:0,27,256	0/0:9,0:8:15.29:0,15,141	0/0:7,0:7:3:0,3,25	0/0:17,0:17:29.52:0,30,344	0/0:12,0:12:32.98:0,33,348	0/0:17,0:17:30.90:0,31,339	0/0:18,0:18:41.85:0,42,377	0/0:12,0:11:28.51:0,29,284	0/0:27,0:25:55.53:0,56,614	0/0:23,0:23:56.49:0,56,618	0/0:13,0:11:26.32:0,26,231	0/0:15,0:15:35.76:0,36,304	0/0:49,0:46:57.29:0,57,648	0/0:14,0:12:15.01:0,15,166	0/0:11,0:9:10.35:0,10,83	0/0:38,0:37:68.99:0,69,720	0/0:7,0:7:12.85:0,13,99	0/0:19,0:18:34.29:0,34,405	0/0:15,0:15:39:0,39,464	0/0:6,0:4:5.97:0,6,48
chr10	77234124	.	GGT	G	405.10	PASS	AB=0.913;AC=17;AF=0.304;AN=56;BaseQRankSum=4.209;DP=596;FS=0.632;HRun=0;HaplotypeScore=91.6703;InbreedingCoeff=-0.3250;MQ=59.38;MQ0=8;MQRankSum=-0.346;QD=1.11;ReadPosRankSum=-0.430;VQSLOD=1.6847;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:26:33.40:0,33,283	0/0:6,0:5:3.01:0,3,44	1/1:20,0:9:3.01:33,3,0	0/0:21,0:14:8.92:0,9,82	0/0:27,0:26:29.90:0,30,237	0/0:22,2:24:5.45:0,5,487	0/1:20,5:26:99:123,0,363	0/1:15,2:17:30.20:30,0,241	0/0:20,0:20:36.09:0,36,499	0/1:21,1:22:3.54:4,0,379	0/1:26,1:27:25.11:25,0,422	0/1:23,1:24:29.57:30,0,388	0/0:15,0:16:25.01:0,25,526	0/1:18,1:19:9.60:10,0,267	0/1:21,1:23:15.50:15,0,586	0/1:14,3:18:6.59:7,0,319	0/1:23,6:30:99:159,0,445	0/0:25,0:26:19.84:0,20,557	0/1:21,3:23:34.41:34,0,216	0/1:19,0:21:32.73:33,0,122	0/1:26,0:26:21.91:22,0,421	0/1:21,4:25:3.60:4,0,356	0/1:14,1:15:15.82:16,0,172	0/1:26,2:28:10.16:10,0,685	0/0:16,0:15:19.99:0,20,151	0/0:20,1:27:2.37:0,2,314	0/0:7,0:7:3.01:0,3,46	0/0:7,0:7:16.21:0,16,189
chr10	77234130	.	T	TGTGA	1148.85	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-0.554;DP=638;FS=4.377;HRun=0;HaplotypeScore=123.8348;InbreedingCoeff=0.7659;MQ=57.40;MQ0=11;MQRankSum=-2.068;QD=13.68;ReadPosRankSum=-0.467;VQSLOD=3.2992;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:31:46.87:77,0,47	0/0:7,0:6:14.98:0,15,153	0/0:25,0:9:21.03:0,21,220	0/0:34,0:14:35.92:0,36,327	1/1:2,25:29:18.45:704,18,0	0/0:23,0:23:56.95:0,57,809	0/0:26,0:26:63.88:0,64,803	0/0:17,0:17:41.93:0,42,529	0/0:18,0:18:51.08:0,51,770	0/0:22,0:22:62.99:0,63,822	0/0:27,0:27:66.07:0,66,880	0/0:21,0:21:57.06:0,57,778	0/0:18,0:18:51.09:0,51,799	0/0:21,0:21:47.99:0,48,606	0/0:24,0:24:62.41:0,62,984	0/0:19,0:19:39.86:0,40,550	0/0:29,0:29:72.15:0,72,1023	0/0:33,0:32:82.24:0,82,1020	0/0:27,0:26:68.20:0,68,733	0/0:22,0:22:59.87:0,60,600	0/0:27,0:27:65.89:0,66,812	0/0:24,0:24:56.98:0,57,727	0/0:16,0:16:33.01:0,33,406	0/0:31,0:31:78.12:0,78,1140	1/1:4,13:16:21.05:495,21,0	0/0:25,0:24:50.78:0,51,469	0/0:11,0:11:26.94:0,27,247	0/0:7,0:7:20.87:0,21,222
chr10	77234460	.	C	CT	122.79	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.754;DP=540;FS=3.507;HRun=9;HaplotypeScore=98.2170;InbreedingCoeff=0.6999;MQ=56.38;MQ0=20;MQRankSum=-2.199;QD=4.91;ReadPosRankSum=-3.598;VQSLOD=0.5716;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,12:23:20.95:215,21,0	0/0:8,0:7:14.83:0,15,122	0/0:44,0:15:14.73:0,15,132	0/0:60,0:15:5.31:0,5,72	0/0:19,0:17:28.38:0,28,206	0/0:18,0:18:32.97:0,33,287	0/0:9,0:9:20.99:0,21,182	0/0:29,0:28:30.94:0,31,353	0/0:11,0:11:17.76:0,18,156	0/0:21,0:20:26.97:0,27,282	0/0:24,0:23:12.80:0,13,266	0/0:17,0:17:26.84:0,27,234	0/0:8,0:7:14.96:0,15,123	0/0:10,0:10:13.18:0,13,107	0/0:14,0:14:14.98:0,15,130	0/0:16,0:15:17.17:0,17,155	0/0:21,0:20:41.45:0,41,362	0/0:35,0:33:25.62:0,26,327	0/0:17,0:16:26.70:0,27,223	0/0:17,0:17:38.71:0,39,334	0/0:5,0:5:11.96:0,12,96	0/0:11,0:11:12.32:0,12,147	0/0:14,0:14:29.97:0,30,256	0/0:15,0:15:32.91:0,33,283	0/0:16,0:14:35.27:0,35,263	0/0:27,0:27:50.32:0,50,423	0/0:21,0:20:38.09:0,38,337	0/0:7,0:7:7.13:0,7,120
chr10	77234479	.	CTTTTCTTTTT	C	547.56	PASS	AB=0.867;AC=5;AF=0.089;AN=56;BaseQRankSum=5.066;DP=549;FS=3.687;HRun=0;HaplotypeScore=138.9278;InbreedingCoeff=0.2779;MQ=51.82;MQ0=27;MQRankSum=-2.333;QD=8.83;ReadPosRankSum=-1.789;VQSLOD=2.1489;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:19:31.76:32,0,590	0/1:8,1:8:56.69:57,0,415	0/0:46,0:11:1.48:0,1,48	0/0:67,0:11:19.74:0,20,159	1/1:15,1:16:16.82:148,17,0	0/0:14,0:14:36.08:0,36,1132	0/0:8,0:8:14.91:0,15,303	0/0:25,0:24:61.86:0,62,1289	0/0:14,0:13:36.11:0,36,1029	0/0:25,0:24:64.02:0,64,1388	0/0:19,0:18:45.46:0,45,1033	0/0:13,0:13:28.39:0,28,674	0/0:9,0:8:17.86:0,18,218	0/0:15,0:14:33.65:0,34,758	0/0:15,0:15:27.08:0,27,843	0/0:16,0:15:32.44:0,32,640	0/0:25,0:23:62.84:0,63,1709	0/0:31,0:30:68.04:0,68,2276	0/0:21,0:17:25.19:0,25,740	0/0:19,0:16:45:0,45,1105	0/0:4,0:4:12.03:0,12,185	0/0:10,0:10:17.88:0,18,273	0/0:15,0:15:35.52:0,36,901	0/0:16,0:16:32.81:0,33,1083	0/1:8,5:13:46.55:432,0,47	0/0:23,0:25:66.10:0,66,1689	0/0:22,0:21:33.90:0,34,1130	0/0:7,0:5:11.91:0,12,201
chr10	77234614	.	T	TAC	552.30	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=6.876;DP=441;FS=1.783;HRun=0;HaplotypeScore=59.9829;InbreedingCoeff=0.7645;MQ=72.78;MQ0=0;MQRankSum=-0.023;QD=13.47;ReadPosRankSum=-0.036;VQSLOD=3.3095;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:51.02:0,51,507	0/0:4,0:4:12.04:0,12,177	0/0:10,0:10:5.91:0,6,188	0/1:11,0:11:5.93:6,0,161	1/1:8,9:18:25.59:370,26,0	0/0:27,0:27:75.24:0,75,1124	0/0:23,0:23:69.23:0,69,1050	0/0:29,0:29:81.24:0,81,1194	0/0:14,0:14:36.12:0,36,541	0/0:19,0:19:57.19:0,57,871	0/0:15,0:15:42.14:0,42,631	0/0:11,0:11:24.05:0,24,366	0/0:10,0:10:30.10:0,30,450	0/0:14,0:14:42.14:0,42,639	0/0:11,0:11:33.09:0,33,474	0/0:20,0:20:51.15:0,51,756	0/0:13,0:13:39.13:0,39,596	0/0:16,0:16:48.16:0,48,722	0/0:21,0:21:60.20:0,60,895	0/0:20,0:20:57.17:0,57,844	0/0:23,0:23:69.23:0,69,1056	0/0:13,0:13:39.13:0,39,589	0/0:12,0:12:33.10:0,33,473	0/0:12,0:12:33.11:0,33,495	1/1:6,6:12:19.84:300,20,0	0/0:9,0:9:27.09:0,27,403	0/0:24,0:24:66.16:0,66,1007	0/0:9,0:9:27.09:0,27,413
chr10	77234616	.	G	GA	760.08	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=3.876;DP=452;FS=6.197;HRun=9;HaplotypeScore=52.1608;InbreedingCoeff=0.7953;MQ=73.31;MQ0=0;MQRankSum=-1.999;QD=11.52;ReadPosRankSum=-0.105;VQSLOD=2.3218;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:22:51.10:551,51,0	0/0:4,0:4:9:0,9,78	0/0:10,0:10:3.14:0,3,86	0/0:12,0:12:14.96:0,15,129	1/1:21,0:21:37.99:221,38,0	0/0:27,0:27:65.97:0,66,570	0/0:24,0:24:65.95:0,66,565	0/0:28,0:28:74.96:0,75,645	0/0:14,0:14:35.96:0,36,308	0/0:19,0:20:59.01:0,59,498	0/0:15,0:15:26.84:0,27,224	0/0:11,0:11:20.99:0,21,182	0/0:10,0:10:26.99:0,27,234	0/0:14,0:14:32.99:0,33,286	0/0:13,0:13:32.97:0,33,286	0/0:20,0:20:44.97:0,45,391	0/0:13,0:13:35.99:0,36,312	0/0:17,0:17:35.97:0,36,313	0/0:22,0:22:44.93:0,45,381	0/0:19,0:19:53.97:0,54,465	0/0:23,0:23:68.99:0,69,599	0/0:13,0:13:35.99:0,36,310	0/0:11,0:11:23.98:0,24,204	0/0:11,0:11:29.99:0,30,260	1/1:12,0:12:22.99:127,23,0	0/1:10,0:10:6.07:6,0,181	0/0:25,0:26:67.95:0,68,563	0/0:9,0:9:26.99:0,27,234
chr10	77234687	.	GAA	G	803.15	PASS	AB=0.667;AC=5;AF=0.089;AN=56;BaseQRankSum=7.253;DP=505;FS=3.768;HRun=9;HaplotypeScore=65.6248;InbreedingCoeff=0.7715;MQ=75.07;MQ0=0;MQRankSum=0.156;QD=22.95;ReadPosRankSum=1.702;VQSLOD=2.9068;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:56.68:0,57,886	0/1:2,1:4:23.41:23,0,96	0/0:14,0:14:33.11:0,33,514	0/0:14,0:14:27.09:0,27,413	1/1:1,20:21:54.15:629,54,0	0/0:16,0:16:42.14:0,42,689	0/0:22,0:23:59.69:0,60,944	0/0:25,0:25:66.21:0,66,1035	0/0:26,0:26:69.24:0,69,1132	0/0:21,0:21:54:0,54,834	0/0:14,0:14:39.13:0,39,640	0/0:13,0:13:24.08:0,24,394	0/0:14,0:15:41.63:0,42,648	0/0:18,0:18:45.11:0,45,709	0/0:17,0:18:48.12:0,48,739	0/0:17,0:18:47.61:0,48,718	0/0:22,0:22:60.12:0,60,925	0/0:27,0:27:78.27:0,78,1277	0/0:15,0:16:44.64:0,45,695	0/0:19,0:19:54.18:0,54,886	0/0:22,0:22:57.19:0,57,936	0/0:10,0:10:21.07:0,21,330	0/0:5,0:5:15.05:0,15,246	0/0:11,0:11:33.11:0,33,541	1/1:0,10:10:24.07:280,24,0	0/0:30,0:30:84.29:0,84,1376	0/0:40,0:40:99:0,111,1820	0/0:9,0:9:24.97:0,25,396
chr10	77234963	.	A	AAAAAC	1184.96	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-3.900;DP=402;FS=0.951;HRun=0;HaplotypeScore=73.4167;InbreedingCoeff=0.6845;MQ=61.81;MQ0=14;MQRankSum=1.066;QD=24.18;ReadPosRankSum=-0.045;VQSLOD=2.8854;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:21:36.02:0,36,393	0/0:1,0:1:3.01:0,3,56	0/1:22,0:10:0.25:0,0,76	0/0:23,0:5:4.72:0,5,77	1/1:3,9:12:27.09:701,27,0	0/0:8,0:8:24.08:0,24,452	0/0:19,0:19:40.44:0,40,710	0/0:21,0:15:39.13:0,39,686	0/0:12,0:12:24.08:0,24,405	0/0:10,0:10:27.09:0,27,493	0/0:12,0:12:21.03:0,21,331	0/0:11,0:11:30.10:0,30,562	0/0:12,0:11:15.05:0,15,266	0/0:3,0:3:9.03:0,9,169	0/0:11,0:11:21.07:0,21,395	0/0:16,0:16:45.14:0,45,767	0/0:26,0:25:54.19:0,54,1016	0/0:34,0:33:74.88:0,75,1309	0/0:14,0:9:21.06:0,21,333	0/0:18,0:16:24.08:0,24,430	0/0:3,0:3:6.02:0,6,113	0/0:6,0:6:12.04:0,12,226	0/0:15,0:14:30.10:0,30,549	0/0:16,0:15:39.12:0,39,652	1/1:4,9:15:21.07:603,21,0	0/0:17,0:17:39.13:0,39,718	0/0:16,0:16:42.04:0,42,685	0/0:6,0:6:15.05:0,15,282
chr10	77235464	.	A	AT	180.45	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=4.411;DP=437;FS=12.518;HRun=10;HaplotypeScore=49.5431;InbreedingCoeff=0.6156;MQ=41.95;MQ0=39;MQRankSum=-4.136;QD=8.20;ReadPosRankSum=-0.286;VQSLOD=0.3710;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:12:27:273,27,0	0/0:10,0:10:20.97:0,21,172	./.	./.	0/0:25,0:23:44.87:0,45,362	0/0:17,0:17:29.92:0,30,240	0/0:19,0:14:8.98:0,9,74	0/0:29,0:18:47.86:0,48,382	0/0:9,0:9:23.93:0,24,192	0/0:32,0:32:45.64:0,46,509	0/0:18,0:18:26.96:0,27,222	0/0:13,0:13:17.98:0,18,148	0/0:4,0:4:5.99:0,6,49	0/0:8,0:8:14.98:0,15,123	0/0:11,0:10:17.98:0,18,148	0/0:13,0:13:23.96:0,24,197	0/0:20,0:18:20:0,20,154	0/0:16,0:13:17.98:0,18,148	0/0:17,1:16:4.59:0,5,224	0/0:20,0:19:38.87:0,39,312	0/0:10,0:10:11.99:0,12,99	0/0:10,0:10:20.97:0,21,172	0/0:11,0:11:17.97:0,18,148	0/0:9,0:7:3:0,3,25	0/0:12,0:12:23.96:0,24,197	0/0:29,0:28:71.83:0,72,581	0/0:16,0:16:35.95:0,36,295	0/0:11,0:11:14.98:0,15,123
chr10	77235679	.	G	GT	1291.99	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.007;DP=679;FS=3.341;HRun=1;HaplotypeScore=68.4498;InbreedingCoeff=0.9989;MQ=66.22;MQ0=0;MQRankSum=-0.448;QD=38.00;ReadPosRankSum=1.573;VQSLOD=4.3543;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1679	0/0:10,0:10:27.09:0,27,351	0/0:25,0:25:66.04:0,66,776	0/0:26,0:26:60.12:0,60,749	1/1:0,17:17:51.13:739,51,0	0/0:16,0:16:48.16:0,48,623	0/0:27,0:27:78.25:0,78,1013	0/0:22,0:22:60.19:0,60,779	0/0:25,0:25:75.24:0,75,972	0/0:27,0:27:71.37:0,71,934	0/0:21,0:21:63.20:0,63,817	0/0:13,0:13:39.13:0,39,506	0/0:21,0:21:60.14:0,60,733	0/0:26,0:26:72.21:0,72,917	0/0:22,0:22:66.20:0,66,841	0/0:20,0:20:60.20:0,60,779	0/0:30,0:30:84.26:0,84,1076	0/0:21,0:21:63.20:0,63,818	0/0:25,0:25:69.22:0,69,896	0/0:27,0:27:78.18:0,78,963	0/0:54,0:54:99:0,162,2068	0/0:17,0:17:48.16:0,48,622	0/0:14,0:14:42.14:0,42,545	0/0:40,0:40:99:0,117,1517	1/1:1,16:17:45.15:674,45,0	0/0:35,0:34:99:0,105,1350	0/0:27,0:27:72.22:0,72,917	0/0:9,0:9:27.07:0,27,335
chr10	77236286	.	GAAA	G	759.88	PASS	AB=0.848;AC=4;AF=0.071;AN=56;BaseQRankSum=9.182;DP=484;FS=0.673;HRun=3;HaplotypeScore=90.3934;InbreedingCoeff=-0.0753;MQ=52.30;MQ0=9;MQRankSum=-7.522;QD=10.27;ReadPosRankSum=1.090;VQSLOD=0.1899;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:99:144,0,197	0/0:9,0:9:23.94:0,24,450	0/0:14,0:4:11.25:0,11,228	0/0:14,0:2:6.02:0,6,147	0/1:10,9:19:99:336,0,144	0/0:13,0:13:39.13:0,39,925	0/0:17,0:17:45.09:0,45,994	0/0:20,0:20:60.12:0,60,1209	0/0:22,0:22:60.20:0,60,1342	0/0:23,0:23:66.67:0,67,1355	0/1:16,0:16:2.59:3,0,547	0/0:19,0:19:57.20:0,57,1318	0/0:15,0:15:45.15:0,45,1083	0/0:17,0:17:45.14:0,45,961	0/0:14,0:14:42.13:0,42,938	0/0:17,0:17:35.70:0,36,953	0/0:15,0:15:42.14:0,42,996	0/0:22,0:22:60.41:0,60,1250	0/0:20,0:20:57.17:0,57,1215	0/0:14,0:14:42.06:0,42,698	0/0:24,0:23:34.82:0,35,1173	0/0:15,0:15:42.11:0,42,965	0/0:11,0:11:33.06:0,33,706	0/0:26,0:25:48.49:0,48,1457	0/1:12,8:20:99:380,0,198	0/0:26,0:25:72.21:0,72,1664	0/0:12,0:12:36.01:0,36,657	0/0:10,0:10:30.10:0,30,684
chr10	77236292	.	A	AG	273.67	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=8.696;DP=463;FS=6.928;HRun=1;HaplotypeScore=75.6540;InbreedingCoeff=0.3499;MQ=52.20;MQ0=9;MQRankSum=-7.780;QD=5.07;ReadPosRankSum=0.467;VQSLOD=0.2957;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:33.48:278,33,0	0/0:9,0:9:26.37:0,26,279	0/0:14,0:4:11.63:0,12,127	0/0:14,0:2:6.02:0,6,78	0/1:17,0:17:38.14:38,0,173	0/0:13,0:13:39.10:0,39,479	0/0:18,0:18:39.12:0,39,493	0/0:19,0:19:51.13:0,51,632	0/0:22,0:21:57.06:0,57,687	0/0:18,0:18:48.15:0,48,610	0/0:17,0:17:2.90:0,3,275	0/0:19,0:19:57.18:0,57,738	0/0:15,0:15:45.14:0,45,572	0/0:16,0:16:39.11:0,39,479	0/0:14,0:14:39.12:0,39,487	0/0:17,0:17:35.39:0,35,500	0/0:14,2:16:4.04:0,4,474	0/0:19,0:19:52.23:0,52,626	0/0:23,0:22:63.12:0,63,776	0/0:10,0:10:29.95:0,30,338	0/0:24,1:24:25.33:0,25,593	0/0:14,0:14:42.14:0,42,544	0/0:10,0:10:27.09:0,27,350	0/0:22,1:23:18.62:0,19,720	0/1:20,0:20:72.67:73,0,192	0/0:24,0:24:72.23:0,72,923	0/0:8,0:8:24.07:0,24,299	0/0:12,0:12:36.09:0,36,437
chr10	77236360	.	G	GGAAA	873.53	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=8.855;DP=654;FS=39.945;HRun=0;HaplotypeScore=113.3415;InbreedingCoeff=0.1872;MQ=66.30;MQ0=14;MQRankSum=1.151;QD=4.57;ReadPosRankSum=-3.708;VQSLOD=-0.5212;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:74.39:0,74,576	0/1:24,0:23:99:102,0,287	0/0:17,0:14:35.11:0,35,381	0/0:11,0:10:29.73:0,30,251	1/1:1,19:20:50.51:405,51,0	0/0:26,0:26:26.81:0,27,501	0/0:27,0:26:49.92:0,50,489	0/0:19,0:15:23.82:0,24,331	0/0:26,0:25:68.88:0,69,662	0/0:30,0:29:36.79:0,37,574	0/1:21,0:20:54.54:55,0,295	0/0:23,0:23:59.98:0,60,647	0/0:19,0:19:40.24:0,40,441	0/1:18,0:18:99:115,0,184	0/1:13,0:13:8.58:9,0,222	0/1:23,0:23:21.06:21,0,375	0/0:29,0:29:48.69:0,49,546	0/1:23,0:23:34.40:34,0,343	0/0:23,0:22:24.08:0,24,480	0/1:21,0:20:0.73:1,0,287	0/0:49,0:46:46.65:0,47,798	0/0:25,0:25:74.77:0,75,697	0/0:18,0:18:41.74:0,42,348	0/0:41,0:40:99:0,110,1026	1/1:15,0:15:23.99:279,24,0	0/0:38,0:38:90.20:0,90,910	0/1:13,0:13:10.97:11,0,210	0/0:14,0:13:38.98:0,39,447
chr10	77237378	.	T	TACAC	4159.92	PASS	AB=0.781;AC=36;AF=0.667;AN=54;BaseQRankSum=0.462;DP=686;FS=6.869;HRun=0;HaplotypeScore=134.1957;InbreedingCoeff=-0.1259;MQ=62.54;MQ0=10;MQRankSum=0.657;QD=6.93;ReadPosRankSum=-1.095;VQSLOD=1.7687;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,13:33:8.77:154,9,0	1/1:3,3:6:5.92:140,6,0	0/1:45,0:19:0:0,0,0	./.	0/0:13,0:19:18.02:0,18,167	0/1:10,8:22:35.23:124,0,35	1/1:17,10:28:8.31:154,8,0	0/1:28,0:27:18.20:63,0,18	0/1:15,0:28:74.87:75,0,177	1/1:18,7:26:28.45:548,28,0	1/1:10,7:17:12.04:284,12,0	1/1:9,0:17:8.71:38,9,0	0/1:8,0:17:25.04:25,0,36	1/1:12,4:17:6.02:142,6,0	1/1:9,5:14:9.03:213,9,0	1/1:12,11:24:27.09:639,27,0	1/1:11,10:22:29.93:652,30,0	0/1:14,0:23:21.31:125,0,21	0/1:17,0:17:13.43:27,0,13	0/1:16,0:27:21.68:84,0,22	0/1:32,0:48:33.30:34,0,33	0/1:9,0:17:27.13:27,0,33	0/1:18,0:21:62.04:162,0,62	0/1:17,1:35:60.26:147,0,60	0/0:20,0:21:35.87:0,36,465	1/1:17,0:33:38.21:278,38,0	0/1:14,0:20:3.62:4,0,85	0/1:10,0:12:20.44:20,0,36
chr10	77239043	.	C	CA	1811.13	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.361;DP=631;FS=5.741;HRun=1;HaplotypeScore=60.2574;InbreedingCoeff=0.9987;MQ=86.35;MQ0=0;MQRankSum=-0.958;QD=38.53;ReadPosRankSum=0.294;VQSLOD=4.0548;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,1737	0/0:14,0:14:39.11:0,39,492	0/0:23,0:23:60.67:0,61,780	0/0:18,0:19:48.42:0,48,559	1/1:0,26:26:75.25:1124,75,0	0/0:14,0:14:39.13:0,39,506	0/0:29,0:29:87.28:0,87,1129	0/0:28,0:28:81.25:0,81,1029	0/0:26,0:26:69.22:0,69,896	0/0:36,0:36:99:0,102,1324	0/0:8,0:8:24.08:0,24,312	0/0:20,0:20:60.18:0,60,765	0/0:14,0:14:42.12:0,42,530	0/0:21,0:21:63.19:0,63,804	0/0:18,0:18:54.15:0,54,672	0/0:20,0:20:57.19:0,57,740	0/0:36,0:36:99:0,108,1386	0/0:20,0:20:60.15:0,60,753	0/0:27,0:27:78.22:0,78,973	0/0:16,0:16:48.16:0,48,623	0/0:34,0:34:99:0,102,1324	0/0:13,0:13:39.12:0,39,499	0/0:18,0:18:48.13:0,48,605	0/0:27,0:27:78.25:0,78,1013	1/1:0,21:21:54.18:809,54,0	0/0:27,0:27:66.21:0,66,857	0/0:20,0:20:60.20:0,60,779	0/0:11,0:11:33.11:0,33,428
chr10	77239403	.	TTGA	T	1465.31	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.633;DP=642;FS=1.418;HRun=0;HaplotypeScore=100.9033;InbreedingCoeff=0.9990;MQ=74.09;MQ0=0;MQRankSum=-8.144;QD=36.63;ReadPosRankSum=-4.398;VQSLOD=3.0437;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,2947	0/0:9,0:9:27.09:0,27,619	0/0:26,0:26:78.27:0,78,1740	0/0:12,0:12:30.10:0,30,678	1/1:4,17:21:50.75:778,51,0	0/0:16,0:15:48.16:0,48,1105	0/0:26,0:26:75.26:0,75,1707	0/0:42,0:42:99:0,120,2711	0/0:16,0:16:45.15:0,45,1037	0/0:25,0:25:75.26:0,75,1722	0/0:12,0:12:33.11:0,33,761	0/0:23,0:23:69.20:0,69,1458	0/0:25,0:25:75.26:0,75,1705	0/0:19,0:19:54.19:0,54,1221	0/0:26,0:26:72.25:0,72,1660	0/0:23,0:23:66.23:0,66,1519	0/0:28,0:28:81.28:0,81,1864	0/0:23,0:23:60.21:0,60,1353	0/0:17,0:17:48.16:0,48,1107	0/0:15,0:15:42.14:0,42,930	0/0:52,0:52:99:0,157,3590	0/0:20,0:20:48.16:0,48,1058	0/0:17,0:17:51.17:0,51,1152	0/0:25,0:25:75.26:0,75,1729	1/1:2,17:19:48.16:808,48,0	0/0:19,0:19:54.19:0,54,1225	0/0:23,0:23:69.24:0,69,1588	0/0:19,0:19:57.20:0,57,1314
chr10	77239418	.	T	TC	1298.57	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.467;DP=634;FS=0.000;HRun=2;HaplotypeScore=74.9905;InbreedingCoeff=0.9907;MQ=78.94;MQ0=0;MQRankSum=-8.759;QD=34.17;ReadPosRankSum=-1.843;VQSLOD=3.0527;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,144,1770	0/0:5,0:5:15.05:0,15,186	0/0:32,0:32:96.28:0,96,1159	0/0:17,0:17:48.15:0,48,591	1/1:3,19:22:51.17:732,51,0	0/0:12,0:11:36.11:0,36,446	0/0:27,0:27:81.25:0,81,1004	0/0:33,0:33:90.27:0,90,1106	0/0:17,0:17:51.16:0,51,632	0/0:28,0:28:78.23:0,78,946	0/0:8,0:8:24.08:0,24,298	0/0:24,0:24:69.20:0,69,842	0/0:27,0:27:81.25:0,81,1004	0/0:16,0:16:45.14:0,45,558	0/0:22,0:22:60.19:0,60,743	0/0:18,0:18:51.16:0,51,632	0/0:27,0:27:78.24:0,78,966	0/0:22,0:22:57.14:0,57,689	0/0:14,0:14:42.13:0,42,521	0/0:22,0:22:60.17:0,60,729	0/0:48,0:48:99:0,141,1747	0/0:15,0:15:39.11:0,39,471	0/0:18,0:18:48.15:0,48,594	0/0:27,0:27:72.22:0,72,893	1/1:0,16:16:48.16:688,48,0	0/0:18,0:18:54.15:0,54,656	0/0:26,0:26:75.24:0,75,930	0/0:21,0:21:60.19:0,60,742
chr10	77241080	.	CA	C	54.86	PASS	AB=0.892;AC=11;AF=0.196;AN=56;BaseQRankSum=3.816;DP=601;FS=3.303;HRun=16;HaplotypeScore=85.5567;InbreedingCoeff=0.0015;MQ=68.37;MQ0=4;MQRankSum=1.823;QD=0.24;ReadPosRankSum=4.606;VQSLOD=-0.6179;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:35:39.30:116,39,0	0/0:7,1:8:0.44:0,0,109	0/0:36,0:13:2.69:0,3,9	0/0:23,0:9:2.13:0,2,5	0/0:19,0:21:29.16:0,29,173	0/0:13,2:17:2.92:0,3,207	0/0:14,2:16:5.99:0,6,153	0/1:20,5:26:8.77:9,0,215	0/0:22,0:22:28.39:0,28,301	0/1:19,2:23:4.33:4,0,178	0/1:21,3:25:6.93:7,0,122	0/0:18,1:19:14.43:0,14,182	0/0:15,0:15:29.63:0,30,207	0/0:18,1:19:20.11:0,20,226	0/1:16,5:22:8.82:9,0,237	0/0:12,1:14:17.70:0,18,229	0/0:28,2:30:38.40:0,38,388	0/0:12,0:18:29.75:0,30,230	0/1:18,1:21:3.19:3,0,159	0/1:17,5:24:15.47:15,0,274	0/1:22,0:24:11.29:11,0,136	0/0:26,1:29:35.57:0,36,377	0/0:23,2:26:32.59:0,33,342	0/0:9,1:10:5.95:0,6,155	0/0:15,0:18:19.36:0,19,108	0/1:18,2:23:11:11,0,158	0/0:24,0:25:30.58:0,31,359	0/1:7,0:9:0.18:0,0,94
chr10	77241098	.	C	CAA	729.57	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=1.781;DP=620;FS=0.728;HRun=8;HaplotypeScore=83.1165;InbreedingCoeff=0.8497;MQ=57.49;MQ0=9;MQRankSum=-2.279;QD=9.60;ReadPosRankSum=-1.314;VQSLOD=0.0970;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:84.22:0,84,945	0/0:9,0:9:17.78:0,18,179	0/1:32,0:7:0.14:0,0,27	0/0:27,0:7:9.39:0,9,75	1/1:8,17:23:36.09:527,36,0	0/0:20,0:19:33.01:0,33,399	0/0:14,0:14:36.10:0,36,401	0/0:33,0:33:82.87:0,83,881	0/0:25,0:25:48.49:0,48,594	0/0:25,0:24:59.89:0,60,720	0/0:18,0:18:38.17:0,38,388	0/0:18,0:18:38.80:0,39,432	0/0:11,0:11:30.07:0,30,322	0/0:21,0:21:57.13:0,57,612	0/0:25,0:25:60.11:0,60,644	0/0:12,0:12:28.19:0,28,329	0/0:27,0:27:59.82:0,60,650	0/0:17,0:17:33.08:0,33,360	0/0:21,0:20:47.83:0,48,525	0/0:32,0:32:87.22:0,87,954	0/0:24,0:23:50.81:0,51,530	0/0:24,0:24:57.08:0,57,613	0/0:24,0:24:63.04:0,63,672	0/0:15,0:15:35.79:0,36,400	1/1:4,14:19:23.81:323,24,0	0/0:33,0:33:79.46:0,79,913	0/0:24,0:24:59.90:0,60,633	0/0:10,0:10:25.88:0,26,272
chr10	77241540	.	C	CA	1337.43	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.941;DP=571;FS=13.570;HRun=8;HaplotypeScore=59.7154;InbreedingCoeff=0.9471;MQ=64.52;MQ0=1;MQRankSum=-1.275;QD=22.67;ReadPosRankSum=2.298;VQSLOD=3.3038;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.05:0,93,854	0/0:9,0:10:26.05:0,26,226	0/0:12,0:9:23.83:0,24,197	0/0:21,0:16:19.30:0,19,222	1/1:4,27:31:75.18:848,75,0	0/0:22,0:22:54.02:0,54,494	0/0:14,0:14:39:0,39,351	0/0:26,0:26:60.01:0,60,543	0/0:18,0:18:42:0,42,379	0/0:20,0:20:51.02:0,51,467	0/0:25,0:24:62.83:0,63,562	0/0:18,0:18:45.02:0,45,412	0/0:18,0:18:45.02:0,45,412	0/0:12,0:12:27.01:0,27,247	0/0:13,0:13:36.01:0,36,325	0/0:15,0:15:42.02:0,42,384	0/0:27,0:27:71.99:0,72,646	0/0:25,0:25:63:0,63,571	0/0:24,0:24:54.01:0,54,491	0/0:24,0:24:72.03:0,72,653	0/0:18,0:18:48.03:0,48,439	0/0:17,1:18:13.39:0,13,371	0/0:29,0:29:69.01:0,69,625	0/0:11,0:11:33.02:0,33,302	1/1:4,24:28:8.32:603,8,0	0/0:22,0:22:54.02:0,54,494	0/0:19,0:19:51:0,51,461	0/0:18,0:18:54:0,54,488
chr10	77241766	.	T	TCA	5191.39	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=4.313;DP=613;FS=0.788;HRun=0;HaplotypeScore=118.9741;InbreedingCoeff=0.9294;MQ=64.71;MQ0=27;MQRankSum=-1.554;QD=17.48;ReadPosRankSum=0.499;VQSLOD=5.0671;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:60.32:0,60,479	1/1:6,0:6:9.45:73,9,0	0/0:73,0:34:70.69:0,71,623	0/0:71,0:27:40.52:0,41,377	0/0:21,0:21:53.68:0,54,445	1/1:29,0:29:73.06:620,73,0	1/1:27,0:27:50.64:421,51,0	1/1:36,0:36:89.74:750,90,0	0/0:18,0:18:47.85:0,48,394	1/1:21,0:21:56.86:507,57,0	1/1:0,15:15:8.77:51,9,0	0/0:11,0:11:29.94:0,30,247	0/0:17,0:17:38.89:0,39,311	1/1:9,0:9:23.96:196,24,0	1/1:11,0:10:29.95:245,30,0	1/1:14,0:14:29.93:282,30,0	1/1:20,0:18:35.69:266,36,0	0/1:7,0:6:3.98:75,0,4	1/1:15,0:11:29.79:242,30,0	1/1:17,0:16:26.93:218,27,0	1/1:25,0:22:32.93:289,33,0	0/0:13,0:11:26.95:0,27,218	0/0:16,0:15:35.92:0,36,293	0/0:29,0:29:56.71:0,57,445	0/0:13,0:13:37.79:0,38,319	1/1:15,0:15:41.94:368,42,0	1/1:8,0:8:20.63:142,21,0	1/1:22,0:22:57.70:448,58,0
chr10	77243179	.	TGC	T	201.41	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.623;DP=549;FS=0.000;HRun=0;HaplotypeScore=84.5239;InbreedingCoeff=0.7422;MQ=66.92;MQ0=7;MQRankSum=-1.123;QD=9.59;ReadPosRankSum=1.452;VQSLOD=3.3614;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:93.25:0,93,1419	0/0:6,0:6:11.93:0,12,132	0/0:11,0:7:1.25:0,1,3	0/0:14,0:8:3.01:0,3,41	1/1:2,7:9:3.01:39,3,0	0/0:17,0:16:33:0,33,550	0/0:28,0:28:66.65:0,67,1051	0/0:25,0:24:45.04:0,45,685	0/0:19,0:19:42.14:0,42,691	0/0:13,0:13:33.11:0,33,531	0/0:11,0:10:12.04:0,12,201	0/0:25,0:25:51.02:0,51,784	0/0:15,0:15:35.47:0,35,524	0/0:16,0:16:30.06:0,30,459	0/0:21,0:21:45.07:0,45,694	0/0:11,0:11:24.08:0,24,404	0/0:41,0:39:72.17:0,72,1115	0/0:30,0:30:67.35:0,67,991	0/0:22,0:21:36.12:0,36,574	0/0:17,0:16:42.04:0,42,565	0/0:46,0:46:96.19:0,96,1496	0/0:16,0:16:36.12:0,36,581	0/0:12,0:12:27.05:0,27,412	0/0:25,0:25:57.19:0,57,946	1/1:7,5:11:21.07:270,21,0	0/0:22,0:21:60.20:0,60,969	0/0:11,0:11:27.08:0,27,426	0/0:10,0:9:18.06:0,18,303
chr10	77243196	.	G	GCACA	5251.39	PASS	AB=0.668;AC=37;AF=0.685;AN=54;BaseQRankSum=-3.653;DP=620;FS=0.000;HRun=0;HaplotypeScore=103.9977;InbreedingCoeff=0.5399;MQ=55.82;MQ0=10;MQRankSum=1.154;QD=12.30;ReadPosRankSum=-0.053;VQSLOD=4.0090;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:54:36.02:0,36,328	1/1:3,2:6:3.01:71,3,0	1/1:8,0:4:2.96:19,3,0	./.	1/1:13,0:12:3:25,3,0	1/1:10,7:16:9.03:212,9,0	1/1:17,10:33:35:501,35,0	1/1:30,0:28:7.80:56,8,0	0/0:22,0:22:32.93:0,33,484	1/1:13,0:13:8.02:124,8,0	1/1:5,4:10:5.75:83,6,0	0/0:19,0:22:26.58:0,27,461	0/0:14,0:16:15.22:0,15,345	0/1:8,10:20:70.19:344,0,70	1/1:13,8:23:20.25:887,20,0	0/1:7,2:11:14.31:170,0,14	1/1:24,14:42:20.06:239,20,0	1/1:16,14:33:35.98:673,36,0	1/1:15,0:14:2.97:20,3,0	1/1:9,5:17:20.17:266,20,0	1/1:44,0:46:3.04:372,3,0	0/0:16,0:20:12.03:0,12,169	0/0:15,0:15:6.85:0,7,156	0/0:31,0:31:46.04:0,46,695	1/1:15,0:25:2.94:18,3,0	0/1:13,16:28:3.98:670,0,4	1/1:16,2:19:23.54:407,24,0	1/1:7,2:10:8.50:95,8,0
chr10	77243551	.	GGTGT	G	321.08	PASS	AB=0.921;AC=6;AF=0.115;AN=52;BaseQRankSum=1.327;DP=624;FS=1.233;HRun=0;HaplotypeScore=104.5818;InbreedingCoeff=0.5192;MQ=67.70;MQ0=15;MQRankSum=0.410;QD=3.34;ReadPosRankSum=2.142;VQSLOD=1.9502;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:27:6.42:40,0,6	0/0:6,0:9:5.52:0,6,118	./.	./.	1/1:6,6:12:12.04:186,12,0	0/0:11,0:14:17.80:0,18,316	0/0:22,0:23:17.80:0,18,364	0/0:28,0:28:12.04:0,12,267	0/0:15,0:17:11.78:0,12,217	0/0:32,0:32:51.13:0,51,903	0/0:6,0:11:11.99:0,12,181	0/0:17,0:16:21.04:0,21,391	0/0:15,0:15:15.03:0,15,236	0/0:23,0:22:5.95:0,6,95	0/0:13,0:19:23.88:0,24,442	0/0:15,0:17:17.80:0,18,298	0/0:26,0:25:18.95:0,19,332	0/0:16,0:20:21.03:0,21,338	0/0:25,0:25:6.01:0,6,98	0/0:20,0:20:27.08:0,27,575	0/0:56,0:54:44.83:0,45,831	0/0:19,0:19:32.94:0,33,684	0/0:15,0:15:12.22:0,12,170	0/1:31,2:36:63.18:63,0,411	1/1:12,9:21:12:159,12,0	0/0:29,0:29:18.31:0,18,273	0/0:17,0:19:26.48:0,26,445	0/0:19,0:19:18.06:0,18,415
chr10	77243575	.	T	TGT	802.72	PASS	AB=1.000;AC=19;AF=0.365;AN=52;BaseQRankSum=-1.305;DP=683;FS=0.818;HRun=0;HaplotypeScore=88.5860;InbreedingCoeff=0.4863;MQ=52.90;MQ0=21;MQRankSum=1.102;QD=3.14;ReadPosRankSum=-2.502;VQSLOD=1.4477;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:4.47:0,4,20	1/1:7,0:7:2.72:44,3,0	./.	./.	0/0:27,0:26:11.36:0,11,57	0/1:19,0:18:23.27:23,0,66	0/0:22,0:22:14.86:0,15,135	1/1:22,0:21:3.74:9,4,0	0/0:18,0:18:8.84:0,9,71	1/1:32,6:39:22.31:281,22,0	1/1:13,0:13:8.78:78,9,0	0/0:24,0:22:9.02:0,9,96	0/0:18,0:18:3:0,3,32	1/1:28,0:27:2.82:26,3,0	1/1:25,0:25:17.81:175,18,0	0/0:18,0:18:5.84:0,6,46	1/1:27,0:26:15.52:204,16,0	1/1:29,0:27:9:96,9,0	0/0:21,0:20:3.01:0,3,32	0/0:29,0:29:20.97:0,21,188	0/0:55,0:54:23.86:0,24,234	0/1:24,0:24:21.35:21,0,165	0/0:18,0:17:4.88:0,5,45	0/0:30,0:30:29.41:0,29,248	0/0:18,0:18:8.52:0,9,42	0/0:35,0:34:5.84:0,6,46	0/1:23,0:23:17.78:18,0,147	0/0:16,0:16:18.05:0,18,192
chr10	77244545	.	TC	T	1541.27	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.161;DP=713;FS=3.701;HRun=2;HaplotypeScore=68.7262;InbreedingCoeff=0.9880;MQ=87.94;MQ0=0;MQRankSum=-5.548;QD=32.11;ReadPosRankSum=2.877;VQSLOD=3.5665;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,45:48:99:1636,126,0	0/0:6,0:6:18.06:0,18,270	0/0:24,0:24:69.23:0,69,988	0/0:27,0:27:75.15:0,75,1044	0/0:17,0:17:51.17:0,51,759	0/0:32,0:32:87.29:0,87,1300	0/0:35,0:35:99:0,105,1554	0/0:30,0:30:90.29:0,90,1292	0/0:27,0:27:78.24:0,78,1114	0/0:17,0:17:48.16:0,48,715	0/0:9,0:9:27.09:0,27,405	0/0:29,0:29:87.28:0,87,1284	0/0:30,0:30:87.29:0,87,1298	0/0:28,0:28:84.28:0,84,1234	0/0:17,0:17:51.17:0,51,765	0/0:22,0:22:66.22:0,66,989	0/0:29,0:29:87.29:0,87,1304	0/0:25,0:25:69.18:0,69,983	0/0:28,0:28:84.27:0,84,1240	0/0:12,0:12:36.12:0,36,537	0/0:72,0:72:99:0,208,2966	0/0:22,0:22:60.20:0,60,899	0/0:9,0:9:27.09:0,27,405	0/0:40,0:40:99:0,120,1799	0/0:17,0:17:51.17:0,51,764	0/0:31,0:31:93.32:0,93,1394	0/0:22,0:22:66.21:0,66,968	0/0:8,0:8:24.08:0,24,360
chr10	77244794	.	G	GA	788.69	PASS	AB=0.882;AC=15;AF=0.268;AN=56;BaseQRankSum=-1.569;DP=456;FS=1.940;HRun=12;HaplotypeScore=61.6658;InbreedingCoeff=0.1077;MQ=81.73;MQ0=0;MQRankSum=-0.677;QD=3.70;ReadPosRankSum=0.186;VQSLOD=0.0993;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:7.39:203,7,0	0/1:7,1:8:11.01:11,0,92	0/0:30,0:24:35.59:0,36,251	0/0:30,0:26:21.63:0,22,132	1/1:6,14:20:32.91:292,33,0	0/1:15,2:17:2.39:2,0,148	0/1:9,1:10:8.32:8,0,110	0/0:15,0:15:26.80:0,27,196	0/0:13,0:13:1.04:0,1,130	0/0:10,1:12:2.69:0,3,173	0/0:10,0:10:17.84:0,18,129	0/0:14,0:14:5.03:0,5,172	0/1:9,1:10:8.31:8,0,110	0/1:12,2:14:40.53:41,0,70	0/0:8,0:8:17.85:0,18,130	0/0:7,0:7:14.90:0,15,109	0/0:33,0:33:35.35:0,35,387	0/1:19,11:30:99:115,0,244	0/1:18,3:21:10.67:11,0,254	0/0:10,0:12:20.14:0,20,154	0/0:8,0:8:14.88:0,15,109	0/0:16,1:18:14.40:0,14,252	0/0:10,0:9:22.92:0,23,159	0/0:13,1:14:0.63:0,1,168	1/1:4,13:17:6.02:213,6,0	0/1:13,2:17:36.43:36,0,77	0/1:20,1:22:0.38:0,0,152	0/0:6,0:6:8.90:0,9,66
chr10	77244795	.	A	AG	495.06	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=3.171;DP=454;FS=3.831;HRun=1;HaplotypeScore=63.0135;InbreedingCoeff=0.6835;MQ=81.00;MQ0=0;MQRankSum=-2.999;QD=10.53;ReadPosRankSum=3.947;VQSLOD=1.9308;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:28:43.37:589,43,0	0/0:8,0:8:13.91:0,14,205	0/0:33,0:25:52.87:0,53,547	0/0:30,0:25:42.81:0,43,348	0/1:19,0:19:0.84:1,0,93	0/0:17,0:17:40.76:0,41,486	0/0:10,0:10:20.34:0,20,305	0/0:14,0:14:36.08:0,36,411	0/0:13,0:13:31.61:0,32,360	0/0:14,0:14:28.64:0,29,353	0/0:10,0:10:24.05:0,24,278	0/0:15,0:15:34.26:0,34,394	0/0:10,0:10:26.32:0,26,312	0/0:14,0:14:28.60:0,29,361	0/0:8,0:8:24.06:0,24,301	0/0:7,0:7:18.05:0,18,235	0/0:31,0:31:85.04:0,85,1001	0/0:30,0:30:41.94:0,42,626	0/0:21,0:21:45.89:0,46,546	0/0:12,0:12:12.85:0,13,359	0/0:8,0:8:21.04:0,21,249	0/0:18,0:18:46.73:0,47,568	0/0:10,0:9:23.91:0,24,315	0/0:13,0:13:31.78:0,32,423	0/0:17,0:17:7.56:0,8,116	0/0:15,0:15:22.83:0,23,242	0/0:23,0:23:58.54:0,59,614	0/0:6,0:6:18.02:0,18,188
chr10	77246155	.	ATTTT	A	636.44	PASS	AB=1.000;AC=4;AF=0.074;AN=54;BaseQRankSum=4.147;DP=262;FS=4.259;HRun=4;HaplotypeScore=43.2507;InbreedingCoeff=0.1346;MQ=67.10;MQ0=5;MQRankSum=0.386;QD=23.57;ReadPosRankSum=-0.047;VQSLOD=-0.2362;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,6:15:0.93:528,1,0	0/0:3,0:3:8.98:0,9,74	0/0:15,0:7:14.18:0,14,121	0/0:8,0:5:5.68:0,6,61	0/1:6,0:6:32.35:106,0,32	0/0:10,0:10:30.05:0,30,518	0/0:2,0:2:6.01:0,6,65	0/0:30,0:28:84.11:0,84,1314	0/0:4,0:4:11.98:0,12,157	0/0:9,0:9:27.04:0,27,316	0/0:3,0:3:8.98:0,9,134	0/0:7,0:7:21.04:0,21,366	0/0:1,0:1:3:0,3,27	0/0:9,0:9:27.03:0,27,356	0/0:6,0:6:18.03:0,18,274	0/0:3,0:3:6.01:0,6,55	0/0:22,0:22:64:0,64,1272	0/0:32,0:32:96.17:0,96,1983	0/0:14,0:14:42.01:0,42,548	0/0:5,0:5:15.03:0,15,252	0/0:3,0:3:9.02:0,9,196	0/0:1,0:1:2.99:0,3,24	./.	0/0:2,0:2:3.01:0,3,86	0/1:6,0:6:9.62:102,0,10	0/0:7,0:7:20.40:0,20,288	0/0:11,0:11:32.97:0,33,574	0/0:27,0:27:81.08:0,81,1027
chr10	77246372	.	TG	T	1734.87	PASS	AB=0.980;AC=36;AF=0.643;AN=56;BaseQRankSum=2.121;DP=510;FS=2.068;HRun=1;HaplotypeScore=34.3768;InbreedingCoeff=-0.1204;MQ=33.72;MQ0=163;MQRankSum=1.026;QD=3.86;ReadPosRankSum=1.787;VQSLOD=0.4850;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:24:51.66:413,52,0	0/1:9,1:3:3.45:18,0,3	0/1:33,3:3:11.66:14,0,12	0/0:38,9:9:7.74:0,8,41	1/1:7,8:10:17.80:120,18,0	1/1:10,0:5:1.44:35,1,0	1/1:14,0:9:7.15:65,7,0	1/1:25,0:14:7.73:138,8,0	1/1:6,0:3:3.49:34,3,0	0/1:16,0:8:5.81:6,0,84	1/1:3,6:8:3.76:35,4,0	1/1:15,1:11:5.52:80,6,0	1/1:5,0:4:2.99:23,3,0	0/1:6,0:4:9.60:10,0,15	0/1:12,0:10:15.83:77,0,16	0/1:4,0:3:4.24:4,0,10	0/1:31,2:28:9.89:190,0,10	1/1:23,0:16:20.49:150,20,0	0/1:71,0:26:55.77:176,0,56	0/1:10,0:7:20.45:20,0,28	0/1:21,0:6:24.28:34,0,24	0/0:4,0:1:2.92:0,3,17	0/1:10,0:6:0.99:10,0,1	0/0:9,0:5:4.82:0,5,30	1/1:7,0:6:11.46:81,11,0	0/1:19,0:9:4.86:52,0,5	0/1:17,1:13:7.02:57,0,7	0/1:24,0:12:10.61:46,0,11
chr10	77247039	.	C	CT	1914.49	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.556;DP=532;FS=0.000;HRun=8;HaplotypeScore=53.8852;InbreedingCoeff=0.9788;MQ=63.85;MQ0=0;MQRankSum=-3.019;QD=26.23;ReadPosRankSum=1.287;VQSLOD=4.2498;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:35:87.09:984,87,0	0/0:6,0:6:15.01:0,15,137	0/0:11,0:11:24.94:0,25,225	0/0:4,0:5:11:0,11,80	1/1:1,17:18:45.13:519,45,0	0/0:26,0:26:63.02:0,63,577	0/0:15,0:15:35.99:0,36,324	0/0:31,0:31:78.02:0,78,714	0/0:13,0:13:33.02:0,33,301	0/0:20,0:20:48.02:0,48,439	0/0:23,0:23:53.84:0,54,494	0/0:20,0:20:54.01:0,54,491	0/0:18,0:18:48.01:0,48,434	0/0:13,0:13:30.01:0,30,275	0/0:16,0:16:39.01:0,39,352	0/0:25,0:25:56.99:0,57,513	0/0:18,0:18:51.03:0,51,466	0/0:27,0:27:69.03:0,69,631	0/0:21,0:21:48:0,48,432	0/0:19,0:19:41.99:0,42,382	0/0:9,0:9:24.01:0,24,220	0/0:11,0:11:27.01:0,27,247	0/0:20,0:20:53.80:0,54,475	0/0:21,0:21:54.03:0,54,494	1/1:3,17:20:48.14:554,48,0	0/0:22,0:22:60.03:0,60,549	0/0:25,0:25:63.02:0,63,577	0/0:24,0:24:69.04:0,69,632
chr10	77247349	.	GT	G	15187.41	PASS	AB=0.813;AC=53;AF=0.946;AN=56;BaseQRankSum=-2.578;DP=500;FS=0.000;HRun=2;HaplotypeScore=62.8123;InbreedingCoeff=0.4665;MQ=53.16;MQ0=4;MQRankSum=0.982;QD=30.87;ReadPosRankSum=2.881;VQSLOD=4.4603;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:26:42.14:542,42,0	1/1:0,7:7:18.06:234,18,0	0/0:6,2:1:3.01:0,3,35	0/1:10,3:5:50.12:61,0,50	1/1:0,28:28:66.21:857,66,0	1/1:0,20:20:57.19:740,57,0	1/1:1,11:12:27.09:350,27,0	1/1:2,29:30:81.16:998,81,0	1/1:0,14:14:30.10:386,30,0	1/1:1,28:29:85.16:1085,85,0	1/1:0,16:16:42.14:545,42,0	1/1:0,14:14:39.13:506,39,0	1/1:0,14:14:30.10:389,30,0	1/1:1,17:18:48.16:623,48,0	1/1:1,17:18:45.15:584,45,0	1/1:1,10:11:18.06:234,18,0	1/1:0,27:27:78.25:1013,78,0	1/1:0,22:22:59.85:779,60,0	1/1:0,14:14:42.12:529,42,0	1/1:0,19:19:42.14:545,42,0	1/1:0,12:12:23.71:311,24,0	1/1:0,18:18:33.11:428,33,0	1/1:0,15:15:36.12:467,36,0	1/1:0,16:16:33.11:428,33,0	1/1:0,20:20:48.16:623,48,0	1/1:0,14:13:33.08:411,33,0	1/1:0,22:22:57.19:740,57,0	1/1:0,21:21:60.20:779,60,0
chr10	77249456	.	AG	A	12262.35	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.350;DP=442;FS=0.000;HRun=2;HaplotypeScore=43.7591;InbreedingCoeff=0.7204;MQ=44.18;MQ0=43;MQRankSum=-0.004;QD=30.20;ReadPosRankSum=1.004;VQSLOD=4.1752;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,21:21:57.19:739,57,0	1/1:1,5:6:9.03:117,9,0	0/0:13,2:1:3.01:0,3,32	0/0:20,1:3:3.01:0,3,45	1/1:3,14:16:36.12:465,36,0	1/1:2,17:18:48.16:623,48,0	1/1:5,9:9:27.05:333,27,0	1/1:2,19:18:54.17:688,54,0	1/1:3,13:15:33.11:428,33,0	1/1:0,20:20:60.20:778,60,0	1/1:1,15:16:24.08:311,24,0	1/1:4,11:12:30.10:389,30,0	1/1:0,12:12:33.11:427,33,0	1/1:3,4:5:9.03:117,9,0	1/1:0,15:15:42.14:545,42,0	1/1:3,13:14:36.12:467,36,0	1/1:6,12:13:27.04:331,27,0	1/1:5,13:14:29.99:367,30,0	1/1:5,19:20:57.19:740,57,0	1/1:0,15:15:45.15:584,45,0	1/1:2,9:8:24.08:311,24,0	1/1:0,8:8:24.08:310,24,0	1/1:1,6:7:15.05:195,15,0	1/1:0,8:8:24.08:311,24,0	1/1:3,20:23:54.18:701,54,0	1/1:1,26:26:78.25:1012,78,0	1/1:1,16:16:48.16:623,48,0	1/1:1,9:9:27.09:351,27,0
chr10	77250284	.	CAG	C	119.31	PASS	AB=0.968;AC=16;AF=0.296;AN=54;BaseQRankSum=2.905;DP=558;FS=0.000;HRun=0;HaplotypeScore=78.0112;InbreedingCoeff=-0.0229;MQ=75.18;MQ0=17;MQRankSum=1.256;QD=0.48;ReadPosRankSum=-0.797;VQSLOD=1.4263;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,10:26:1.03:57,1,0	0/0:13,0:13:8.41:0,8,127	0/0:41,0:15:0:0,0,0	./.	1/1:20,0:23:6.57:29,7,0	0/0:9,1:9:15:0,15,168	0/1:14,0:14:17.62:18,0,58	0/0:25,0:25:7.98:0,8,39	0/1:26,1:27:5.27:5,0,266	0/0:15,0:15:12.02:0,12,154	0/1:16,0:16:6.60:7,0,39	0/0:14,0:14:17.25:0,17,205	0/1:15,0:15:26.31:26,0,38	0/0:13,0:13:17.99:0,18,240	0/0:17,0:23:23.95:0,24,234	0/0:11,0:11:0:0,0,0	0/0:21,0:21:5.14:0,5,349	0/0:11,0:10:18.29:0,18,203	0/1:21,1:21:23.28:23,0,67	0/1:23,0:23:15.52:16,0,39	0/1:12,0:12:16.88:22,0,17	0/0:16,0:15:5.99:0,6,85	0/0:9,2:11:3:0,3,28	0/1:13,4:17:5.35:5,0,235	1/1:18,0:17:2.74:12,3,0	0/1:18,1:19:17.27:17,0,162	0/0:23,0:20:23.63:0,24,261	0/1:15,0:15:24:24,0,186
chr10	77252319	.	TTA	T	539.62	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.242;DP=517;FS=2.710;HRun=0;HaplotypeScore=71.4591;InbreedingCoeff=0.9902;MQ=83.82;MQ0=0;MQRankSum=-3.008;QD=24.53;ReadPosRankSum=-0.581;VQSLOD=3.7037;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:53.30:634,53,0	0/0:11,0:11:33.09:0,33,524	0/0:32,0:22:49.64:0,50,616	0/0:28,0:21:31.61:0,32,294	0/0:18,0:18:44.80:0,45,474	0/0:20,0:20:60.12:0,60,901	0/0:12,0:12:36.09:0,36,547	0/0:23,0:23:62.96:0,63,815	0/0:11,0:11:33.09:0,33,527	0/0:25,0:25:75.23:0,75,1195	0/0:18,0:18:54.12:0,54,818	0/0:19,0:19:57.11:0,57,841	0/0:8,0:8:24.06:0,24,368	0/0:22,0:22:61.06:0,61,969	0/0:14,0:14:35.05:0,35,651	0/0:20,0:20:53.70:0,54,881	0/0:30,0:30:89.85:0,90,1340	0/0:26,0:26:72.03:0,72,1091	0/0:28,0:28:81.03:0,81,1036	0/0:18,0:18:33.40:0,33,715	0/0:11,0:11:33.11:0,33,563	0/0:13,0:13:39.11:0,39,606	0/0:13,0:13:38.99:0,39,584	0/0:17,0:17:51.11:0,51,810	0/0:14,0:14:24.07:0,24,314	0/0:16,0:16:48.14:0,48,751	0/0:19,0:19:56.91:0,57,772	0/0:7,0:7:21.05:0,21,303
chr10	77252634	.	GAA	G	466.04	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=9.158;DP=528;FS=4.867;HRun=13;HaplotypeScore=85.6546;InbreedingCoeff=0.5909;MQ=67.58;MQ0=6;MQRankSum=-6.779;QD=6.96;ReadPosRankSum=-0.154;VQSLOD=0.9123;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:33:40.01:40,0,194	0/0:6,0:8:17.54:0,18,208	0/0:22,1:12:21.04:0,21,174	0/0:19,0:9:0.46:0,0,93	1/1:1,14:16:38.12:294,38,0	0/0:14,1:20:14.39:0,14,512	0/0:23,0:25:57.17:0,57,790	0/0:24,0:23:38.86:0,39,515	0/0:8,0:8:21.03:0,21,249	0/0:24,0:24:51.11:0,51,664	0/0:20,0:20:50.45:0,50,593	0/0:8,0:9:14.54:0,15,181	0/0:14,0:14:31.55:0,32,340	0/0:14,0:14:33.09:0,33,427	0/0:16,0:18:44.62:0,45,584	0/0:14,0:16:41.10:0,41,520	0/0:31,0:33:86.48:0,86,1138	0/0:23,0:24:71.64:0,72,912	0/0:15,0:15:31.64:0,32,407	0/0:15,0:15:31.49:0,31,359	0/0:16,0:16:48.07:0,48,591	0/0:10,1:12:0.99:0,1,284	0/0:24,2:26:4.89:0,5,652	0/0:25,0:27:68.66:0,69,898	1/1:8,10:18:32.39:260,32,0	0/0:17,0:19:50.07:0,50,574	0/0:15,0:15:39.10:0,39,513	0/0:14,0:14:18.77:0,19,389
chr10	77252639	.	AAAAAAAAAG	A	1295.50	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=8.622;DP=551;FS=5.036;HRun=0;HaplotypeScore=159.1001;InbreedingCoeff=0.8182;MQ=66.00;MQ0=7;MQRankSum=-7.773;QD=15.61;ReadPosRankSum=1.109;VQSLOD=2.2841;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,16:31:25.41:911,25,0	0/0:7,0:7:18.02:0,18,626	0/0:35,0:13:15.15:0,15,619	0/1:20,0:9:17.64:18,0,222	1/1:16,0:16:12.64:271,13,0	0/0:21,0:21:63.19:0,63,2055	0/0:26,0:26:59.42:0,59,2397	0/0:22,0:21:38.85:0,39,1141	0/0:10,0:10:30.10:0,30,1072	0/0:24,0:24:54.09:0,54,1902	0/0:23,0:23:51.18:0,51,1836	0/0:7,0:7:18.06:0,18,714	0/0:16,0:16:39.13:0,39,1498	0/0:13,0:13:30.10:0,30,1113	0/0:20,0:20:57.19:0,57,1945	0/0:17,0:17:45.13:0,45,1632	0/0:34,0:34:93.26:0,93,3353	0/0:25,0:25:72.25:0,72,2932	0/0:19,0:19:45.08:0,45,1419	0/0:17,0:17:30.10:0,30,948	0/0:17,0:17:48.12:0,48,1500	0/0:11,0:11:27.09:0,27,1022	0/0:26,0:26:69.10:0,69,2220	0/0:26,0:26:67.11:0,67,2761	1/1:16,0:16:20.99:241,21,0	0/0:22,0:22:66.22:0,66,2396	0/0:14,0:14:39.10:0,39,1364	0/0:16,0:16:32.75:0,33,1058
chr10	77252648	.	GAAAAA	G	1404.36	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=8.702;DP=577;FS=1.974;HRun=13;HaplotypeScore=121.7886;InbreedingCoeff=0.6821;MQ=68.05;MQ0=7;MQRankSum=-6.375;QD=14.33;ReadPosRankSum=1.118;VQSLOD=0.9253;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:74.51:252,0,75	0/0:8,0:8:21.03:0,21,495	0/0:43,0:20:26.71:0,27,582	0/1:24,0:11:1.53:2,0,210	1/1:6,11:17:35.51:563,36,0	0/0:21,0:21:63.18:0,63,1525	0/0:26,0:26:69.22:0,69,1854	0/0:23,0:22:54.04:0,54,1042	0/0:14,0:14:42.12:0,42,940	0/0:22,0:22:60.07:0,60,1468	0/0:24,0:24:66.15:0,66,1506	0/0:8,0:8:24.08:0,24,600	0/0:13,0:13:39.13:0,39,1078	0/0:11,0:11:33.09:0,33,735	0/0:19,0:19:57.15:0,57,1291	0/0:17,0:17:48.15:0,48,1259	0/0:33,0:34:99:0,99,2368	0/0:26,0:26:75.24:0,75,2040	0/0:19,0:19:54.10:0,54,1198	0/0:16,0:16:35.97:0,36,681	0/0:20,0:20:57.58:0,58,1135	0/0:11,0:11:30.10:0,30,795	0/0:27,0:27:81.16:0,81,1764	0/0:24,0:24:69.70:0,70,1942	1/1:9,10:19:47.36:718,47,0	0/0:23,0:23:69.18:0,69,1760	0/0:16,0:16:47.36:0,47,1110	0/0:14,0:14:42.06:0,42,908
chr10	77254308	.	GGAA	G	1262.14	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.601;DP=547;FS=2.271;HRun=0;HaplotypeScore=82.3394;InbreedingCoeff=0.9785;MQ=51.59;MQ0=10;MQRankSum=-5.036;QD=26.85;ReadPosRankSum=0.970;VQSLOD=3.7681;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:82.76:0,83,1786	0/0:7,0:7:21.07:0,21,468	0/0:49,0:16:24.89:0,25,604	0/0:46,0:18:38.85:0,39,724	1/1:3,21:23:42.09:652,42,0	0/0:23,0:23:60.14:0,60,1269	0/0:21,0:21:54.15:0,54,1082	0/0:23,0:22:63.18:0,63,1176	0/0:22,0:22:63.16:0,63,1301	0/0:20,0:20:15.61:0,16,1061	0/0:15,0:15:42.11:0,42,888	0/0:19,0:19:54.17:0,54,1162	0/0:11,0:11:33.11:0,33,711	0/0:9,0:9:27.08:0,27,553	0/0:12,0:11:33.10:0,33,639	0/0:7,0:7:21.07:0,21,469	0/0:31,0:31:87.24:0,87,1814	0/0:25,0:24:57.19:0,57,1231	0/0:18,0:15:42.12:0,42,869	0/0:12,0:11:33.05:0,33,583	0/0:10,0:10:27.08:0,27,558	0/0:11,0:11:30.10:0,30,655	0/0:12,0:12:36.12:0,36,803	0/0:27,0:27:72.25:0,72,1599	1/1:3,20:23:45.15:732,45,0	0/0:11,0:11:33.11:0,33,698	0/0:20,0:20:60.19:0,60,1281	0/0:7,0:7:15.36:0,15,397
chr10	77256860	.	ACT	A	1537.74	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.853;DP=618;FS=9.670;HRun=0;HaplotypeScore=93.9110;InbreedingCoeff=0.9993;MQ=83.94;MQ0=0;MQRankSum=-0.923;QD=34.95;ReadPosRankSum=2.108;VQSLOD=5.7714;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,111,2233	0/0:10,0:10:30.10:0,30,609	0/0:18,0:18:51.15:0,51,960	0/0:23,0:23:69.23:0,69,1235	1/1:1,24:25:57.19:926,57,0	0/0:15,0:15:45.15:0,45,913	0/0:24,0:24:72.25:0,72,1436	0/0:35,0:35:99:0,102,1972	0/0:30,0:30:87.30:0,87,1742	0/0:22,0:22:66.23:0,66,1327	0/0:17,0:17:48.16:0,48,961	0/0:31,0:31:87.30:0,87,1754	0/0:16,0:16:45.15:0,45,914	0/0:24,0:24:69.24:0,69,1388	0/0:21,0:21:57.20:0,57,1145	0/0:27,0:27:72.25:0,72,1461	0/0:23,0:23:63.22:0,63,1279	0/0:18,0:18:51.18:0,51,1035	0/0:22,0:22:66.23:0,66,1287	0/0:24,0:24:72.25:0,72,1461	0/0:17,0:17:45.15:0,45,890	0/0:20,0:20:60.21:0,60,1197	0/0:10,0:10:30.10:0,30,609	0/0:20,0:20:51.18:0,51,1036	1/1:0,19:19:45.15:733,45,0	0/0:33,0:32:99:0,99,1898	0/0:22,0:22:60.21:0,60,1218	0/0:11,0:11:33.02:0,33,539
chr10	77257335	.	T	TTG	3503.83	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-4.723;DP=494;FS=171.179;HRun=0;HaplotypeScore=87.3433;InbreedingCoeff=0.1330;MQ=76.38;MQ0=24;MQRankSum=-1.478;QD=10.59;ReadPosRankSum=5.330;VQSLOD=0.7464;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:29.60:205,30,0	0/1:12,0:12:41.87:108,0,42	0/0:55,0:12:19.88:0,20,191	0/0:55,0:29:6.04:0,6,233	1/1:13,0:13:36.30:230,36,0	0/1:18,0:18:34.55:35,0,100	1/1:20,1:21:19.12:294,19,0	0/1:30,0:29:39.17:407,0,39	0/0:12,0:12:22.41:0,22,195	1/1:8,0:6:14.98:142,15,0	0/1:17,0:17:6.03:134,0,6	0/0:9,0:8:19.21:0,19,169	0/0:9,0:9:20.57:0,21,157	0/1:10,0:10:9.71:104,0,10	0/1:15,0:15:33.22:34,0,33	1/1:10,0:10:4.12:102,4,0	0/1:28,0:28:72.66:306,0,73	0/1:31,0:31:99:195,0,144	1/1:4,8:12:35.13:279,35,0	1/1:14,0:14:4.18:190,4,0	0/1:15,0:15:28.79:151,0,29	0/0:3,0:2:4.50:0,4,22	0/0:3,0:3:5.99:0,6,50	0/0:16,0:16:38.89:0,39,333	1/1:9,0:9:19.88:124,20,0	0/1:20,0:20:14.40:299,0,14	0/1:17,0:16:21.12:109,0,21	1/1:7,0:7:7.67:54,8,0
chr10	77257336	.	T	TG	3688.57	PASS	AB=0.861;AC=31;AF=0.554;AN=56;BaseQRankSum=-1.257;DP=502;FS=127.671;HRun=0;HaplotypeScore=72.5338;InbreedingCoeff=0.2434;MQ=75.90;MQ0=25;MQRankSum=-2.596;QD=11.08;ReadPosRankSum=5.018;VQSLOD=0.6381;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:41.48:249,41,0	0/1:13,0:13:13.70:113,0,14	0/0:58,0:12:19.89:0,20,185	0/0:59,0:30:12.98:0,13,247	1/1:13,0:13:37.78:237,38,0	0/1:10,8:18:45.07:45,0,89	1/1:20,2:22:34.34:324,34,0	0/1:30,1:30:18.82:385,0,19	0/0:12,0:12:29.43:0,29,236	1/1:9,0:7:14.92:123,15,0	1/1:16,1:17:0.52:155,1,0	0/0:9,0:8:23.95:0,24,212	0/0:9,0:9:22.35:0,22,186	1/1:10,0:10:0.40:105,0,0	0/1:6,9:15:19.08:69,0,19	1/1:9,1:10:18.07:142,18,0	0/1:28,0:28:19.85:294,0,20	0/1:28,2:30:64.23:271,0,64	1/1:12,1:13:16.45:235,16,0	1/1:14,0:14:17.07:179,17,0	0/1:15,0:15:18.56:157,0,19	0/0:3,0:2:4.55:0,5,28	0/0:3,0:3:5.99:0,6,50	0/0:16,0:16:38.93:0,39,336	1/1:9,0:9:22.72:138,23,0	0/1:6,14:20:20.35:271,0,20	0/1:15,1:15:9.92:143,0,10	1/1:6,0:6:8.48:54,8,0
chr10	77257714	.	T	TAAA	1700.70	PASS	AB=0.829;AC=7;AF=0.125;AN=56;BaseQRankSum=8.113;DP=490;FS=7.346;HRun=11;HaplotypeScore=81.1925;InbreedingCoeff=0.4914;MQ=76.71;MQ0=3;MQRankSum=-4.735;QD=12.69;ReadPosRankSum=-4.106;VQSLOD=0.1470;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:20:19.11:28,0,19	0/0:9,0:9:14.97:0,15,175	0/1:44,0:16:23.42:23,0,142	0/1:27,0:23:30.67:31,0,36	1/1:8,12:22:51.16:865,51,0	0/0:19,0:19:39.07:0,39,456	0/0:10,0:11:19.36:0,19,225	0/0:27,0:27:60.06:0,60,678	0/0:14,0:17:32.85:0,33,334	0/0:25,0:25:30.07:0,30,554	0/0:17,0:19:41.93:0,42,456	0/0:11,0:11:27.08:0,27,316	0/0:11,0:12:29.91:0,30,322	0/0:13,0:13:20.95:0,21,245	0/0:11,0:11:21.04:0,21,245	0/0:7,0:8:14.92:0,15,158	0/0:17,0:20:53.88:0,54,575	0/0:22,0:26:62.89:0,63,657	0/0:20,0:20:38.95:0,39,444	0/0:14,0:15:39.03:0,39,439	0/0:5,0:5:9.02:0,9,105	0/0:9,0:9:21.01:0,21,243	0/0:12,0:13:23.93:0,24,263	0/0:12,0:12:27.07:0,27,315	1/1:3,14:17:51.17:895,51,0	0/0:14,0:14:36.08:0,36,415	0/0:22,0:21:54.11:0,54,613	0/0:17,0:18:43.61:0,44,520
chr10	77257739	.	GA	G	732.08	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=8.222;DP=525;FS=0.000;HRun=4;HaplotypeScore=60.1225;InbreedingCoeff=0.8253;MQ=65.33;MQ0=23;MQRankSum=-6.629;QD=10.03;ReadPosRankSum=0.400;VQSLOD=0.3614;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:33.11:0,33,462	0/0:12,0:12:36.09:0,36,481	0/0:32,0:12:13.70:0,14,250	0/1:28,0:13:3.95:4,0,37	1/1:6,19:25:36.10:413,36,0	0/0:18,0:18:45.14:0,45,611	0/0:13,0:13:36.12:0,36,502	0/0:30,0:20:48.14:0,48,639	0/0:19,0:19:48.16:0,48,671	0/0:16,0:16:45.14:0,45,599	0/0:22,0:22:60.17:0,60,820	0/0:20,0:20:42.14:0,42,588	0/0:14,0:14:38.84:0,39,512	0/0:16,0:16:45.15:0,45,625	0/0:21,0:20:45.15:0,45,628	0/0:16,0:16:42.14:0,42,587	0/0:25,0:25:69.20:0,69,928	0/0:28,0:27:65.23:0,65,853	0/0:19,0:16:48.15:0,48,656	0/0:14,0:14:39.13:0,39,544	0/0:9,0:9:24.07:0,24,318	0/0:14,0:14:36.12:0,36,502	0/0:12,0:12:33.10:0,33,443	0/0:11,0:11:33.11:0,33,460	1/1:3,16:18:39.05:439,39,0	0/0:18,0:18:54.16:0,54,721	0/0:19,0:17:51.17:0,51,713	0/0:13,0:13:36.08:0,36,453
chr10	77257799	.	C	CA	418.73	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=6.266;DP=585;FS=25.163;HRun=1;HaplotypeScore=54.0709;InbreedingCoeff=0.8937;MQ=50.10;MQ0=21;MQRankSum=-5.871;QD=12.69;ReadPosRankSum=-0.952;VQSLOD=0.5909;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:15.34:0,15,286	0/0:10,0:10:24.08:0,24,336	0/0:17,0:1:3:0,3,29	./.	1/1:1,17:18:18.06:258,18,0	0/0:16,0:15:42.14:0,42,587	0/0:13,0:14:21.04:0,21,293	0/0:23,0:19:54.17:0,54,740	0/0:16,0:16:42.14:0,42,587	0/0:18,0:17:51.17:0,51,703	0/0:29,0:29:78.26:0,78,1091	0/0:26,0:26:72.24:0,72,1006	0/0:14,0:13:39.12:0,39,528	0/0:23,0:23:63.21:0,63,881	0/0:26,0:25:66.20:0,66,904	0/0:20,0:20:54.18:0,54,755	0/0:40,0:39:81.27:0,81,1132	0/0:33,0:31:63.21:0,63,881	0/0:21,0:15:45.15:0,45,628	0/0:15,0:14:36.12:0,36,503	0/0:40,0:36:60.20:0,60,837	0/0:17,0:16:39.13:0,39,545	0/0:15,0:15:42.14:0,42,587	0/0:22,0:22:60.20:0,60,839	1/1:0,15:14:21.04:279,21,0	0/0:18,0:18:54.18:0,54,755	0/0:22,0:21:48.16:0,48,671	0/0:10,0:10:14.98:0,15,190
chr10	77258430	.	AC	A	16236.98	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=18.081;DP=740;FS=10.513;HRun=4;HaplotypeScore=114.8984;InbreedingCoeff=0.9999;MQ=84.37;MQ0=0;MQRankSum=-3.444;QD=32.87;ReadPosRankSum=2.432;VQSLOD=3.8416;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:99:0,123,1633	1/1:1,12:13:36.11:432,36,0	0/0:22,0:22:63.21:0,63,859	0/0:21,0:21:53.84:0,54,694	1/1:0,17:17:51.16:610,51,0	1/1:0,16:16:45.14:540,45,0	1/1:2,22:24:57.17:684,57,0	1/1:4,29:33:84.23:976,84,0	0/0:33,0:33:96.29:0,96,1309	1/1:2,30:32:96.28:1136,96,0	1/1:1,14:15:39.12:468,39,0	0/0:34,0:34:96.32:0,96,1344	0/0:28,0:28:81.26:0,81,1117	1/1:0,33:33:87.27:1043,87,0	1/1:0,43:43:99:1512,126,0	1/1:0,28:28:78.01:936,78,0	1/1:0,48:48:99:1620,135,0	1/1:0,27:27:78.20:920,78,0	1/1:3,17:20:51.16:612,51,0	1/1:2,10:12:33.10:394,33,0	1/1:1,46:47:99:1547,129,0	0/0:26,0:26:75.22:0,75,1015	0/0:13,0:13:36.12:0,36,503	0/0:25,0:25:72.18:0,72,966	1/1:0,20:20:51.16:612,51,0	1/1:0,24:24:69.21:828,69,0	1/1:0,24:24:66.20:792,66,0	1/1:1,17:18:48.15:576,48,0
chr10	77259128	.	A	AGGG	3925.05	PASS	AB=0.621;AC=34;AF=0.607;AN=56;BaseQRankSum=-1.757;DP=553;FS=6.599;HRun=9;HaplotypeScore=111.9897;InbreedingCoeff=0.7993;MQ=79.10;MQ0=1;MQRankSum=-3.399;QD=11.75;ReadPosRankSum=-3.937;VQSLOD=-0.1669;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:27:12.90:13,0,22	0/1:5,4:10:0:0,0,0	0/0:47,0:32:32.54:0,33,467	0/0:25,0:23:43.80:0,44,476	0/0:21,0:21:40.64:0,41,527	1/1:14,5:22:15.03:252,15,0	1/1:5,8:24:48.09:725,48,0	1/1:15,7:23:7.78:87,8,0	0/0:16,0:16:45.14:0,45,567	1/1:12,4:18:8.97:102,9,0	1/1:8,3:14:3.01:59,3,0	0/0:18,0:18:45.03:0,45,534	0/0:23,0:23:50.79:0,51,614	1/1:7,1:14:12.02:173,12,0	1/1:10,5:16:18.06:316,18,0	1/1:10,6:21:18.06:347,18,0	1/1:9,18:31:39.07:684,39,0	1/1:8,5:15:15.05:259,15,0	1/1:6,8:14:20.98:272,21,0	1/1:22,0:22:5.99:48,6,0	1/1:12,0:11:12.02:186,12,0	0/0:22,0:22:48.10:0,48,580	0/0:14,0:16:33:0,33,388	0/0:17,0:17:51.15:0,51,630	0/0:14,0:14:7.52:0,8,299	1/1:7,4:14:11.51:122,12,0	1/1:14,3:26:19.51:193,20,0	1/1:2,6:9:6.01:84,6,0
chr10	77259995	.	G	GC	2612.21	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=4.468;DP=334;FS=14.371;HRun=9;HaplotypeScore=41.1234;InbreedingCoeff=0.8394;MQ=54.15;MQ0=16;MQRankSum=-1.598;QD=10.20;ReadPosRankSum=-1.333;VQSLOD=0.4092;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,21:26:36.06:384,36,0	1/1:3,0:4:2.88:15,3,0	0/0:15,0:5:14.82:0,15,107	0/0:14,0:5:8.90:0,9,68	1/1:12,0:12:10.54:87,11,0	1/1:16,1:17:20.78:159,21,0	1/1:11,0:11:14.82:105,15,0	1/1:29,0:25:46.42:383,46,0	0/0:9,0:9:20.98:0,21,180	1/1:6,0:6:8.80:69,9,0	1/1:3,8:10:11.78:80,12,0	0/0:10,0:10:23.99:0,24,208	0/0:5,0:5:11.99:0,12,104	1/1:8,0:8:11.96:96,12,0	1/1:8,1:9:20.62:149,21,0	1/1:8,0:8:10.80:80,11,0	1/1:24,0:25:41.67:306,42,0	1/1:19,0:19:20.90:157,21,0	1/1:10,1:9:23.82:189,24,0	1/1:4,0:4:5.79:35,6,0	1/1:18,0:16:17.93:135,18,0	0/0:6,0:6:1.95:0,2,78	0/0:11,0:11:26.99:0,27,234	0/0:8,0:8:20.98:0,21,179	1/1:1,8:10:9.02:98,9,0	1/1:8,0:7:11:73,11,0	1/1:5,0:7:14.71:97,15,0	1/1:6,0:7:14.93:111,15,0
chr10	77260004	.	C	CCC	2735.21	PASS	AB=0.833;AC=39;AF=0.696;AN=56;BaseQRankSum=4.554;DP=345;FS=10.279;HRun=8;HaplotypeScore=48.8981;InbreedingCoeff=0.6569;MQ=62.17;MQ0=10;MQRankSum=-1.672;QD=9.84;ReadPosRankSum=-1.117;VQSLOD=-0.2891;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:30.27:120,30,0	1/1:1,0:4:3.01:46,3,0	0/0:17,0:7:12.79:0,13,138	0/1:14,0:8:10.02:10,0,81	0/1:11,0:11:44.50:44,0,53	1/1:1,0:14:20.53:199,21,0	1/1:1,0:10:14.91:166,15,0	1/1:3,0:25:24.25:346,24,0	0/0:8,0:8:21.05:0,21,223	1/1:0,0:10:7.07:56,7,0	1/1:11,0:11:6.88:54,7,0	0/0:9,0:9:24.06:0,24,255	0/0:6,0:6:12.02:0,12,128	1/1:3,0:10:11.96:115,12,0	1/1:2,0:13:20.28:196,20,0	0/1:0,0:9:6.90:75,0,7	1/1:1,0:28:42.09:455,42,0	1/1:0,1:23:21.04:215,21,0	1/1:1,0:10:17.54:145,18,0	1/1:1,1:4:5.93:46,6,0	1/1:2,1:14:18.04:186,18,0	0/0:5,0:5:14.52:0,15,134	0/0:12,0:12:27.06:0,27,287	0/0:10,0:10:21.04:0,21,223	1/1:10,0:10:9.02:94,9,0	1/1:1,0:8:9.86:68,10,0	1/1:2,0:9:15.03:154,15,0	1/1:1,1:7:15:141,15,0
chr10	77260133	.	CT	C	2588.86	PASS	AB=0.790;AC=39;AF=0.696;AN=56;BaseQRankSum=-0.212;DP=451;FS=6.647;HRun=14;HaplotypeScore=56.8144;InbreedingCoeff=0.3865;MQ=72.75;MQ0=2;MQRankSum=-1.438;QD=6.42;ReadPosRankSum=2.932;VQSLOD=2.2007;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:28,4:33:4.22:4,0,512	1/1:2,6:8:14.79:98,15,0	0/1:35,1:18:18.11:18,0,119	0/1:31,2:19:9.75:10,0,90	1/1:7,5:14:27.78:175,28,0	1/1:4,13:18:4.15:164,4,0	1/1:5,7:14:15.94:94,16,0	1/1:10,0:13:8.95:35,9,0	0/1:7,2:9:20.21:20,0,100	0/1:6,7:14:27.09:117,0,27	1/1:1,7:9:16.81:109,17,0	0/0:11,0:11:16.67:0,17,131	0/0:7,0:7:15:0,15,134	0/1:10,6:16:12.78:67,0,13	1/1:2,6:8:3.50:71,3,0	0/1:2,11:13:1.07:138,0,1	1/1:9,21:32:18.34:251,18,0	1/1:8,19:28:4.12:283,4,0	1/1:5,7:13:22.78:146,23,0	1/1:7,8:17:25.29:169,25,0	1/1:6,16:23:6.89:183,7,0	0/0:5,0:5:14.99:0,15,132	0/0:7,0:7:18.02:0,18,167	0/0:15,1:18:32.70:0,33,275	1/1:3,9:13:25.82:170,26,0	1/1:6,8:14:23.75:164,24,0	1/1:3,13:17:31.06:210,31,0	1/1:2,3:7:12.99:73,13,0
chr10	77261678	.	G	GA	7091.43	PASS	AB=0.929;AC=35;AF=0.625;AN=56;BaseQRankSum=-9.649;DP=560;FS=8.161;HRun=10;HaplotypeScore=60.1350;InbreedingCoeff=0.8514;MQ=77.37;MQ0=0;MQRankSum=-2.405;QD=20.32;ReadPosRankSum=-0.593;VQSLOD=5.4230;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:80.79:0,81,658	1/1:3,7:10:15.04:160,15,0	0/0:19,0:18:34.66:0,35,250	0/0:13,0:13:14.96:0,15,121	0/0:18,0:18:44.93:0,45,368	1/1:8,10:19:44.40:412,44,0	1/1:2,7:9:12.03:128,12,0	1/1:4,19:23:32.47:532,32,0	0/0:10,0:10:23.96:0,24,197	1/1:10,19:30:50.94:517,51,0	1/1:4,24:28:63.12:659,63,0	0/0:23,0:23:56.07:0,56,462	0/0:14,0:14:20.94:0,21,172	1/1:3,12:15:2.56:231,3,0	1/1:0,18:19:44.95:462,45,0	1/1:3,13:16:33.08:352,33,0	1/1:3,22:25:60.11:628,60,0	1/1:7,18:24:7.85:495,8,0	1/1:0,15:16:44.88:448,45,0	1/1:3,16:19:41.98:440,42,0	1/1:2,11:13:30.08:320,30,0	0/0:21,0:21:56.92:0,57,467	0/0:23,1:25:28.15:0,28,433	0/0:34,0:34:86.85:0,87,709	0/1:24,2:26:13.04:13,0,318	1/1:2,20:23:56.99:580,57,0	1/1:5,17:22:1.84:428,2,0	1/1:1,10:11:27.07:288,27,0
chr10	77267595	.	C	CA	1641.82	PASS	AB=0.788;AC=23;AF=0.411;AN=56;BaseQRankSum=0.291;DP=484;FS=7.531;HRun=15;HaplotypeScore=76.0093;InbreedingCoeff=-0.1615;MQ=58.05;MQ0=10;MQRankSum=0.254;QD=4.90;ReadPosRankSum=-0.635;VQSLOD=1.7884;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,1:35:55.96:0,56,335	0/1:2,1:4:15.85:17,0,16	0/0:19,0:7:4.64:0,5,29	0/1:23,0:16:16.94:24,0,17	0/1:14,0:22:0.38:0,0,107	1/1:12,8:19:14.60:206,15,0	0/1:7,6:11:41.70:42,0,42	1/1:17,8:27:5.86:224,6,0	0/0:13,0:14:14.82:0,15,70	0/1:10,7:17:27.07:124,0,27	0/1:12,4:16:36.06:58,0,36	0/1:15,0:16:12.88:13,0,63	0/0:10,0:9:3.73:0,4,24	0/1:4,2:6:9.20:30,0,9	0/1:6,8:15:11.93:116,0,12	0/1:6,4:10:0.05:103,0,0	0/1:10,9:21:3.20:126,0,3	0/1:22,6:26:54.34:200,0,54	0/1:10,7:18:14.30:122,0,14	0/1:13,2:14:26.03:26,0,34	0/1:9,0:10:14.15:14,0,54	0/0:12,0:12:14.58:0,15,90	0/0:13,0:14:12.89:0,13,66	0/0:22,0:21:14.08:0,14,163	0/0:12,0:14:24.62:0,25,137	0/1:12,8:18:36.25:153,0,36	1/1:13,8:21:17.58:127,18,0	0/1:4,3:8:3.07:80,0,3
chr10	77268833	.	C	CT	6416.65	PASS	AB=0.770;AC=40;AF=0.714;AN=56;BaseQRankSum=-6.968;DP=590;FS=1.355;HRun=11;HaplotypeScore=64.0656;InbreedingCoeff=0.5896;MQ=73.29;MQ0=4;MQRankSum=-0.788;QD=13.86;ReadPosRankSum=2.055;VQSLOD=5.1950;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:35:15.57:150,16,0	1/1:2,6:8:15.03:151,15,0	0/0:30,0:20:25.30:0,25,219	0/1:27,0:17:7.75:8,0,60	1/1:2,7:10:26.76:240,27,0	1/1:5,16:21:45.09:456,45,0	1/1:3,12:16:6.18:234,6,0	1/1:7,19:26:6.13:437,6,0	0/0:18,0:18:41.21:0,41,310	1/1:7,20:28:6.56:432,7,0	1/1:2,10:12:18:168,18,0	0/0:21,0:22:50.30:0,50,375	0/0:12,0:13:28.82:0,29,205	0/1:3,12:15:4.24:132,0,4	1/1:6,17:23:4.73:410,5,0	1/1:5,20:25:45.09:457,45,0	1/1:4,34:38:39.89:586,40,0	1/1:5,20:25:45.09:457,45,0	1/1:4,16:21:43.59:414,44,0	0/1:2,4:6:13.56:51,0,14	1/1:9,15:26:32.70:302,33,0	0/0:14,0:14:24.19:0,24,220	0/1:11,1:12:17.11:17,0,175	0/0:23,1:27:33.40:0,33,421	1/1:6,13:19:21.04:213,21,0	1/1:7,15:23:44.91:433,45,0	1/1:9,22:31:30.70:478,31,0	1/1:3,12:15:0.82:190,1,0
chr10	77272124	.	GGCCTGCCT	G	1166.07	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.263;DP=511;FS=20.116;HRun=0;HaplotypeScore=125.3605;InbreedingCoeff=0.8829;MQ=76.25;MQ0=0;MQRankSum=-7.732;QD=43.19;ReadPosRankSum=-3.026;VQSLOD=1.6467;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:5,22:27:57.15:1261,57,0	0/0:6,0:6:12.04:0,12,470	0/0:16,0:16:36.07:0,36,979	0/0:14,0:14:30.07:0,30,1012	0/0:6,0:6:12.04:0,12,457	0/0:23,0:23:60.21:0,60,2502	0/0:28,0:28:78.27:0,78,3331	0/0:28,0:28:78.26:0,78,3174	0/0:13,0:13:36.12:0,36,1552	0/0:13,0:13:24.08:0,24,976	0/0:3,0:3:9.03:0,9,388	0/0:22,0:22:60.18:0,60,2470	0/0:24,0:24:69.24:0,69,2889	0/0:21,0:21:57.20:0,57,2302	0/0:28,0:28:78.27:0,78,3303	0/0:14,0:14:42.14:0,42,1724	0/0:34,0:34:90.31:0,90,3746	0/0:30,0:30:87.28:0,87,3439	0/0:25,0:25:60.21:0,60,2359	0/0:9,0:9:27.09:0,27,1071	0/0:37,0:37:99:0,99,4004	0/0:9,0:9:21.06:0,21,791	0/0:10,0:10:25.22:0,25,1009	0/0:17,0:17:51.18:0,51,2162	0/0:12,0:12:26.34:0,26,1094	0/0:10,0:10:24.08:0,24,922	0/0:17,0:17:39.13:0,39,1620	0/0:15,0:15:42.14:0,42,1748
chr10	77273402	.	GA	G	1916.98	PASS	AB=0.674;AC=25;AF=0.446;AN=56;BaseQRankSum=11.918;DP=465;FS=2.967;HRun=2;HaplotypeScore=98.2428;InbreedingCoeff=0.3198;MQ=63.75;MQ0=12;MQRankSum=-3.814;QD=8.92;ReadPosRankSum=0.945;VQSLOD=1.3616;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.26:0,78,1166	1/1:1,4:5:14.78:101,15,0	0/0:43,0:14:4.74:0,5,252	0/0:41,0:16:11.65:0,12,148	0/0:13,0:13:39.12:0,39,564	1/1:4,5:9:26.64:187,27,0	0/1:11,8:19:38.54:142,0,39	1/1:6,5:11:19.30:134,19,0	0/0:15,0:15:45.10:0,45,644	0/1:6,6:11:15.22:88,0,15	0/1:5,6:9:4.76:54,0,5	0/0:21,0:21:63.19:0,63,920	0/0:18,0:18:48.12:0,48,691	0/1:4,9:13:2.64:129,0,3	1/1:6,11:17:0.98:199,1,0	1/1:4,10:14:13.86:171,14,0	1/1:10,9:19:19.83:188,20,0	0/1:3,5:8:6.22:89,0,6	0/1:6,3:7:32.84:62,0,33	0/1:3,7:9:19.78:80,0,20	0/1:20,6:25:62.15:103,0,62	0/0:16,0:16:48.16:0,48,718	0/0:13,0:13:39.05:0,39,517	0/0:25,0:24:72.23:0,72,1045	0/0:16,0:16:42.14:0,42,628	1/1:4,3:7:1.63:78,2,0	1/1:3,11:14:26.79:226,27,0	0/1:6,5:11:36.32:75,0,36
chr10	77273403	.	AAGG	A	5236.63	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=12.280;DP=472;FS=6.475;HRun=0;HaplotypeScore=105.4469;InbreedingCoeff=0.9224;MQ=65.70;MQ0=12;MQRankSum=-3.716;QD=23.91;ReadPosRankSum=-0.459;VQSLOD=4.5114;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.28:0,81,1875	1/1:5,0:5:13.60:178,14,0	0/0:42,1:16:28.48:0,28,441	0/0:42,1:16:12.67:0,13,204	0/0:13,0:13:39.13:0,39,908	1/1:10,0:10:26.03:330,26,0	1/1:19,0:19:32.05:433,32,0	1/1:13,0:13:26.26:278,26,0	0/0:15,0:15:45.15:0,45,982	1/1:12,0:11:24.50:293,24,0	1/1:10,0:8:11.46:149,11,0	0/0:21,0:21:63.22:0,63,1440	0/0:18,0:18:51.15:0,51,1047	1/1:13,0:13:29.97:388,30,0	1/1:18,0:18:38.70:525,39,0	1/1:15,0:15:38.49:480,38,0	1/1:11,8:19:25.96:353,26,0	1/1:8,0:8:18.48:237,18,0	1/1:9,0:7:9.93:130,10,0	1/1:10,0:9:23.77:250,24,0	0/1:26,0:25:4.69:298,0,5	0/0:16,0:16:48.16:0,48,1117	0/0:13,0:13:39.05:0,39,785	0/0:26,0:25:75.24:0,75,1632	0/0:15,0:15:42.14:0,42,1005	1/1:7,0:7:19.08:173,19,0	1/1:14,0:14:34.96:489,35,0	1/1:11,0:11:21.20:252,21,0
chr10	77273407	.	GGA	G	2987.84	PASS	AB=0.767;AC=30;AF=0.536;AN=56;BaseQRankSum=11.864;DP=466;FS=2.347;HRun=0;HaplotypeScore=100.2603;InbreedingCoeff=0.3845;MQ=61.92;MQ0=12;MQRankSum=-5.479;QD=10.13;ReadPosRankSum=1.119;VQSLOD=3.2972;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.01:0,90,1541	1/1:0,4:4:11.99:104,12,0	0/1:38,0:13:4.98:5,0,313	0/1:43,0:13:7.51:8,0,118	0/0:13,0:13:36.12:0,36,681	1/1:4,5:9:26.99:252,27,0	0/1:9,8:17:30.21:183,0,30	1/1:4,8:12:23.85:231,24,0	0/0:15,0:15:39.13:0,39,714	0/1:5,6:11:8.38:144,0,8	1/1:5,6:9:0.92:101,1,0	0/0:21,0:21:57.18:0,57,1024	0/0:20,0:20:60.11:0,60,988	1/1:4,9:13:1.45:200,1,0	1/1:7,11:18:9.08:333,9,0	1/1:6,10:16:25.13:335,25,0	1/1:11,9:20:31.59:288,32,0	1/1:4,5:9:13.36:183,13,0	0/1:6,3:7:29.84:79,0,30	0/1:2,7:8:11.37:92,0,11	0/1:19,6:24:98.26:146,0,98	0/0:17,0:17:51.17:0,51,906	0/0:11,0:11:33.11:0,33,579	0/0:27,0:26:75.23:0,75,1315	0/0:16,0:16:45.14:0,45,800	1/1:3,3:6:8.90:87,9,0	1/1:3,11:14:32.62:297,33,0	0/1:6,5:11:28.14:117,0,28
chr10	77273945	.	T	TC	1376.67	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.196;DP=763;FS=12.891;HRun=6;HaplotypeScore=73.5951;InbreedingCoeff=0.9990;MQ=83.47;MQ0=1;MQRankSum=-3.182;QD=30.59;ReadPosRankSum=1.546;VQSLOD=3.3825;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,41:45:99:1472,117,0	0/0:9,0:9:27.06:0,27,275	0/0:29,0:29:52.80:0,53,579	0/0:27,0:27:58.67:0,59,580	0/0:21,0:21:57.13:0,57,581	0/0:20,0:20:51.10:0,51,513	0/0:37,0:37:90.17:0,90,910	0/0:31,0:31:63.12:0,63,638	0/0:21,0:21:57.11:0,57,574	0/0:27,0:27:66.13:0,66,667	0/0:18,0:18:54.12:0,54,550	0/0:30,0:30:78.17:0,78,795	0/0:25,0:25:63.10:0,63,633	0/0:30,0:30:72.15:0,72,734	0/0:33,0:33:81.16:0,81,820	0/0:27,0:27:72.16:0,72,733	0/0:24,0:24:69.16:0,69,703	0/0:30,0:30:84.15:0,84,846	0/0:26,0:26:57.11:0,57,581	0/0:18,0:18:48.10:0,48,489	0/0:49,0:48:99:0,126,1286	0/0:28,0:28:78.16:0,78,789	0/0:20,0:20:57.12:0,57,576	0/0:38,0:38:99:0,102,1040	0/0:20,0:20:57.13:0,57,581	0/0:26,0:26:63.14:0,63,642	0/0:26,0:25:75.17:0,75,765	0/0:28,0:28:75.16:0,75,765
chr10	77276933	.	GC	G	1581.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.585;DP=739;FS=0.525;HRun=6;HaplotypeScore=69.8603;InbreedingCoeff=0.9959;MQ=75.17;MQ0=1;MQRankSum=-2.570;QD=26.35;ReadPosRankSum=3.283;VQSLOD=4.0652;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,56:60:99:1676,156,0	0/0:8,0:8:24.07:0,24,302	0/0:17,0:17:45.06:0,45,524	0/0:24,0:23:48.09:0,48,559	0/0:27,0:27:81.24:0,81,1034	0/0:25,0:25:69.19:0,69,865	0/0:35,0:35:99:0,99,1287	0/0:28,0:28:69.22:0,69,895	0/0:33,0:33:96.27:0,96,1218	0/0:16,0:16:48.16:0,48,631	0/0:19,0:19:57.17:0,57,735	0/0:26,0:26:72.22:0,72,933	0/0:25,0:25:66.21:0,66,866	0/0:20,0:20:57.18:0,57,730	0/0:34,0:34:93.28:0,93,1182	0/0:28,0:28:84.27:0,84,1103	0/0:27,0:27:75.24:0,75,987	0/0:34,0:34:91.29:0,91,1186	0/0:17,0:17:51.16:0,51,657	0/0:31,0:31:90.29:0,90,1180	0/0:45,0:44:99:0,126,1655	0/0:20,0:20:60.20:0,60,788	0/0:16,0:16:42.14:0,42,552	0/0:34,0:34:84.26:0,84,1088	0/0:28,0:28:78.24:0,78,1009	0/0:27,0:27:81.25:0,81,1037	0/0:27,0:26:78.25:0,78,1025	0/0:8,0:8:24.08:0,24,316
chr10	77277047	.	G	GA	1444.86	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.210;DP=724;FS=2.377;HRun=9;HaplotypeScore=71.0443;InbreedingCoeff=0.9853;MQ=69.93;MQ0=0;MQRankSum=-4.341;QD=22.58;ReadPosRankSum=2.000;VQSLOD=4.6790;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,52:64:58.16:1540,58,0	0/0:14,0:15:41.02:0,41,345	0/0:20,0:18:18.46:0,18,228	0/0:19,0:16:26.78:0,27,228	0/0:25,0:25:39.91:0,40,511	0/0:20,0:21:19.96:0,20,390	0/0:24,0:26:70.06:0,70,585	0/0:31,1:32:53.74:0,54,684	0/0:18,0:18:47.99:0,48,417	0/0:37,0:39:90.90:0,91,756	0/0:12,0:12:33.85:0,34,282	0/0:26,0:26:65.95:0,66,569	0/0:22,0:22:56.99:0,57,495	0/0:27,0:27:71.98:0,72,625	0/0:31,0:31:83.94:0,84,721	0/0:32,0:32:74.93:0,75,643	0/0:31,0:31:79.77:0,80,689	0/0:33,1:34:46.85:0,47,673	0/0:26,0:26:56.93:0,57,489	0/0:25,0:25:68.97:0,69,599	0/0:23,0:23:59.98:0,60,521	0/0:25,0:25:65.98:0,66,573	0/0:22,0:22:56.94:0,57,488	0/0:22,0:22:59.95:0,60,514	0/0:23,0:23:65.92:0,66,560	0/0:22,0:22:65.98:0,66,570	0/0:32,0:33:91.99:0,92,784	0/0:9,0:9:26.99:0,27,234
chr10	77279472	.	CGA	C	211.78	PASS	AB=0.971;AC=17;AF=0.304;AN=56;BaseQRankSum=7.524;DP=366;FS=42.334;HRun=0;HaplotypeScore=124.8800;InbreedingCoeff=-0.2081;MQ=61.97;MQ0=1;MQRankSum=-4.795;QD=1.28;ReadPosRankSum=2.046;VQSLOD=0.7226;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:18.03:0,18,297	0/1:4,0:4:16.15:16,0,21	0/0:10,0:8:21.07:0,21,401	0/1:12,0:9:3.46:3,0,221	0/0:4,0:4:6.02:0,6,115	0/1:10,0:10:8.34:8,0,9	0/0:18,0:18:14.98:0,15,73	0/0:19,0:19:38.49:0,38,298	0/0:10,0:10:27.08:0,27,480	0/1:13,0:13:38.18:38,0,64	0/1:7,0:7:17.39:17,0,23	0/0:15,0:15:45.13:0,45,793	0/0:17,0:17:48.15:0,48,883	0/1:6,0:6:6.47:52,0,6	0/1:8,0:8:12.81:13,0,32	0/1:15,1:16:23.67:50,0,24	0/1:14,1:14:10.12:10,0,43	0/1:8,0:8:12.03:51,0,12	0/1:10,0:10:9.80:10,0,87	0/1:8,2:10:12.52:35,0,13	0/1:24,0:23:4.61:5,0,86	0/0:14,0:14:39.13:0,39,751	0/0:14,0:14:39.13:0,39,743	0/0:37,0:37:99:0,108,2047	0/0:11,0:11:14.63:0,15,201	0/1:5,1:6:22.71:23,0,49	0/1:7,0:7:1.91:2,0,5	1/1:10,0:10:1.18:27,1,0
chr10	77279473	.	GAGCA	G	2530.37	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=7.393;DP=360;FS=2.199;HRun=0;HaplotypeScore=126.6711;InbreedingCoeff=0.7142;MQ=60.67;MQ0=1;MQRankSum=-5.078;QD=11.55;ReadPosRankSum=-1.509;VQSLOD=3.1528;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:6.56:7,0,96	1/1:4,0:4:8.93:64,9,0	0/0:11,0:8:23.83:0,24,347	0/0:10,0:8:0.12:0,0,83	0/0:4,0:4:5.97:0,6,46	1/1:8,1:9:11.99:118,12,0	1/1:18,0:18:26.81:243,27,0	1/1:19,0:19:0.02:138,0,0	0/0:9,0:9:27.08:0,27,632	1/1:12,1:13:21.11:303,21,0	1/1:7,0:7:8.85:61,9,0	0/0:15,0:15:45.13:0,45,1094	0/0:16,0:16:48.13:0,48,1127	1/1:6,0:6:9.55:61,10,0	1/1:6,2:8:9.44:87,9,0	1/1:14,2:16:24.26:235,24,0	1/1:13,2:14:13.75:188,14,0	1/1:7,1:8:22.09:181,22,0	1/1:9,0:9:16.78:144,17,0	1/1:9,1:10:12:143,12,0	0/1:23,0:22:0.13:127,0,0	0/0:14,0:14:39.11:0,39,891	0/0:14,0:14:39.09:0,39,912	0/0:36,0:36:99:0,108,2718	0/0:11,0:11:7.81:0,8,78	1/1:5,1:6:0.18:133,0,0	1/1:7,0:7:11.97:117,12,0	1/1:8,2:10:30.04:379,30,0
chr10	77279476	.	CACGCACGCACGCACGCGCGCGT	C	7747.77	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=10.864;DP=354;FS=15.646;HRun=0;HaplotypeScore=208.2140;InbreedingCoeff=0.4910;MQ=59.99;MQ0=4;MQRankSum=-8.695;QD=44.78;ReadPosRankSum=0.974;VQSLOD=3.0738;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:13.71:0,14,340	0/0:3,0:3:1.73:0,2,20	0/0:15,0:8:24.04:0,24,816	0/0:12,0:8:12.01:0,12,223	0/0:6,0:6:6.02:0,6,245	0/1:9,0:9:8.13:236,0,8	0/1:17,0:17:0.79:777,0,1	1/1:18,0:18:30.13:554,30,0	0/0:8,0:8:24.08:0,24,1833	1/1:12,0:12:10.28:876,10,0	1/1:6,0:6:3.99:15,4,0	0/0:15,0:15:45.15:0,45,3903	0/0:15,0:15:45.14:0,45,3510	0/1:5,0:5:0.01:144,0,0	0/1:8,0:8:10.43:253,0,10	1/1:13,1:14:1.51:573,2,0	1/1:13,1:13:1.81:745,2,0	1/1:8,0:8:15.86:414,16,0	1/1:8,0:8:0.25:290,0,0	1/1:8,2:10:10.28:493,10,0	0/1:22,0:20:7.43:67,0,7	0/0:15,0:15:42.14:0,42,2895	0/0:13,0:13:36.11:0,36,2509	0/0:35,0:35:99:0,105,8401	0/0:11,0:11:12.03:0,12,386	1/1:5,1:6:18.03:617,18,0	0/1:6,0:6:8.24:276,0,8	1/1:10,0:10:30.10:1418,30,0
chr10	77279481	.	ACGCACGCACGCGCGCGTG	A	7319.51	PASS	AC=32;AF=0.593;AN=54;BaseQRankSum=10.571;DP=346;FS=20.531;HRun=0;HaplotypeScore=170.5015;InbreedingCoeff=0.8540;MQ=54.80;MQ0=5;MQRankSum=-9.213;QD=43.57;ReadPosRankSum=-0.722;VQSLOD=2.7438;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:10.72:0,11,121	./.	0/0:15,0:8:11.85:0,12,566	0/0:9,0:5:8.98:0,9,107	0/0:6,0:6:6.48:0,6,148	1/1:12,1:13:9.01:214,9,0	1/1:16,0:16:18.06:801,18,0	1/1:16,0:16:45.04:543,45,0	0/0:10,0:10:30.10:0,30,1728	1/1:11,1:12:27.08:886,27,0	1/1:4,0:4:2.98:21,3,0	0/0:16,0:16:48.15:0,48,3276	0/0:15,0:15:45.15:0,45,2886	1/1:4,0:4:6.02:126,6,0	1/1:6,1:7:9.03:223,9,0	1/1:12,1:13:18:485,18,0	1/1:12,2:13:18.53:701,19,0	1/1:6,0:6:15:359,15,0	1/1:6,0:6:18.01:300,18,0	1/1:8,1:9:9.03:390,9,0	1/1:24,0:22:5.99:70,6,0	0/0:16,0:15:39.12:0,39,2202	0/0:12,0:12:33.10:0,33,1895	0/0:34,0:34:99:0,102,6524	0/0:11,0:11:9.03:0,9,244	1/1:9,1:10:18.50:558,19,0	1/1:4,0:4:6.02:276,6,0	1/1:8,2:10:30.10:1367,30,0
chr10	77279488	.	CACGCGCGCGT	C	3510.01	PASS	AB=1.000;AC=24;AF=0.444;AN=54;BaseQRankSum=9.934;DP=376;FS=0.587;HRun=0;HaplotypeScore=146.9752;InbreedingCoeff=0.3663;MQ=53.90;MQ0=7;MQRankSum=-8.612;QD=19.61;ReadPosRankSum=2.673;VQSLOD=2.8996;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,23:29:3.95:75,4,0	1/1:2,0:2:3.01:34,3,0	0/0:14,0:7:13.89:0,14,353	0/0:9,0:5:4.24:0,4,28	0/0:6,0:6:3.48:0,3,49	1/1:14,0:14:3.01:72,3,0	1/1:15,0:15:18.06:479,18,0	0/0:12,0:12:33.15:0,33,224	0/0:14,0:14:42.14:0,42,1454	0/1:13,0:13:10.32:426,0,10	./.	0/0:17,0:17:51.18:0,51,2291	0/0:18,0:18:51.63:0,52,2080	1/1:5,0:5:5.97:76,6,0	0/1:10,0:10:16.98:68,0,17	0/1:14,0:14:10.74:215,0,11	1/1:25,0:23:5.63:416,6,0	0/1:7,0:7:13.05:142,0,13	0/1:6,0:6:47.20:84,0,47	1/1:9,0:9:9.03:230,9,0	0/0:27,0:25:3.51:0,4,24	0/0:13,0:12:36.08:0,36,1394	0/0:12,0:12:33.11:0,33,1373	0/0:38,0:37:99:0,107,4747	0/0:10,0:13:9.25:0,9,57	0/1:11,0:11:9.42:247,0,9	1/1:7,0:7:5.46:158,5,0	1/1:11,0:11:33.10:786,33,0
chr10	77279489	.	ACGCGCGCGTG	A	4511.66	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=10.137;DP=379;FS=1.931;HRun=0;HaplotypeScore=143.1351;InbreedingCoeff=0.6841;MQ=53.76;MQ0=8;MQRankSum=-8.162;QD=21.69;ReadPosRankSum=-0.326;VQSLOD=4.3442;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:31:9.96:125,10,0	1/1:1,1:2:3.01:50,3,0	0/0:14,0:7:9.23:0,9,274	0/0:9,0:5:5.50:0,6,40	0/0:8,0:8:3.48:0,3,73	1/1:2,12:14:3.01:86,3,0	1/1:5,9:14:18.06:586,18,0	0/1:13,0:12:0.27:0,0,0	0/0:14,0:14:42.13:0,42,1440	1/1:5,8:13:26.94:634,27,0	1/1:2,2:4:1.25:3,1,0	0/0:18,0:18:51.18:0,51,2254	0/0:18,0:18:48.60:0,49,1933	1/1:3,1:5:6.02:88,6,0	1/1:6,3:9:3.01:70,3,0	1/1:7,6:13:9.03:222,9,0	1/1:23,3:25:24.12:549,24,0	1/1:2,4:6:6.02:169,6,0	1/1:5,1:6:9:162,9,0	1/1:7,3:10:9.92:225,10,0	0/0:12,15:25:2.22:0,2,13	0/0:12,0:11:27.09:0,27,1272	0/0:12,0:12:32.60:0,33,1190	0/0:39,0:38:99:0,107,4404	0/1:10,0:13:3.37:3,0,82	1/1:4,7:11:16.78:360,17,0	1/1:3,3:6:8.77:210,9,0	1/1:3,8:11:33.10:970,33,0
chr10	77279499	.	GCA	G	75.64	PASS	AB=0.956;AC=14;AF=0.259;AN=54;BaseQRankSum=3.741;DP=415;FS=0.797;HRun=0;HaplotypeScore=120.8276;InbreedingCoeff=-0.0772;MQ=45.25;MQ0=11;MQRankSum=-1.701;QD=0.39;ReadPosRankSum=1.511;VQSLOD=2.2533;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:13.16:0,13,110	0/0:5,0:5:3.57:0,4,37	./.	0/0:7,0:2:2.97:0,3,20	0/1:9,0:10:0:0,0,0	0/0:18,0:18:0.50:0,0,25	0/0:20,0:20:8.34:0,8,90	0/0:9,0:8:20.69:0,21,158	0/1:12,1:13:3.07:3,0,370	0/1:13,0:12:0.27:0,0,59	0/0:8,0:8:12.03:0,12,142	0/0:19,1:20:5.48:0,5,503	0/1:15,3:18:39.24:39,0,289	0/0:9,0:9:5.80:0,6,67	0/1:15,0:15:0.86:1,0,92	0/1:16,0:16:25.79:26,0,36	0/1:25,0:23:7.84:8,0,10	1/1:5,0:5:2.84:14,3,0	0/0:11,0:9:9.26:0,9,116	1/1:13,0:13:1.90:13,2,0	0/0:21,0:20:2.99:0,3,23	0/1:11,1:11:36.45:36,0,204	0/1:9,1:11:15.10:15,0,185	0/1:38,3:41:44.22:44,0,741	0/0:15,0:15:14.67:0,15,162	0/0:11,0:11:4.24:0,4,72	0/0:11,0:11:2.96:0,3,19	0/0:15,0:14:4.12:0,4,69
chr10	77281709	.	G	GC	21992.32	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-14.482;DP=782;FS=8.122;HRun=1;HaplotypeScore=69.6456;InbreedingCoeff=0.9996;MQ=84.36;MQ0=0;MQRankSum=-4.251;QD=38.58;ReadPosRankSum=-1.561;VQSLOD=4.5514;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,52:53:99:1932,129,0	1/1:0,16:16:39.13:583,39,0	0/0:20,0:20:52.12:0,52,697	0/0:25,0:25:69.17:0,69,841	1/1:0,15:15:42.14:629,42,0	1/1:0,22:22:60.20:899,60,0	1/1:2,25:27:65.90:989,66,0	1/1:0,35:35:99:1434,99,0	0/0:27,0:27:81.21:0,81,1019	1/1:3,18:21:54.14:781,54,0	1/1:1,18:19:48.16:718,48,0	0/0:26,0:26:71.97:0,72,934	0/0:21,0:21:63.20:0,63,818	1/1:1,33:34:90.30:1349,90,0	1/1:2,39:41:99:1754,117,0	1/1:1,36:37:99:1529,102,0	1/1:2,36:38:99:1528,102,0	1/1:0,18:18:54.18:809,54,0	1/1:3,19:22:57.19:847,57,0	1/1:1,18:19:48.12:693,48,0	1/1:2,73:74:99:2698,181,0	0/0:29,0:29:78.25:0,78,1012	0/0:23,0:23:66.21:0,66,857	0/0:41,0:41:99:0,117,1519	1/1:1,20:21:45.15:674,45,0	1/1:2,27:29:72.20:1023,72,0	1/1:1,18:19:51.17:764,51,0	1/1:0,9:9:24.08:360,24,0
chr10	77282490	.	G	GGTGTGTGT	3623.59	PASS	AB=1.000;AC=41;AF=0.788;AN=52;BaseQRankSum=1.701;DP=446;FS=3.133;HRun=0;HaplotypeScore=135.6982;InbreedingCoeff=0.4916;MQ=58.01;MQ0=6;MQRankSum=-4.890;QD=10.35;ReadPosRankSum=-4.550;VQSLOD=0.5294;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:2.97:21,3,0	1/1:9,0:9:3.01:104,3,0	./.	./.	1/1:14,1:15:6.01:70,6,0	1/1:20,1:21:11.68:234,12,0	1/1:15,0:13:2.70:69,3,0	1/1:34,0:33:9.17:50,9,0	0/0:9,0:11:10.85:0,11,209	1/1:13,0:13:15.52:413,16,0	1/1:15,0:15:2.55:103,3,0	0/1:14,0:14:25.64:26,0,85	0/0:11,0:11:17.98:0,18,302	1/1:7,0:7:3.22:49,3,0	1/1:20,0:20:8.66:236,9,0	1/1:23,0:24:11.65:338,12,0	1/1:17,0:17:0.47:1,0,0	1/1:16,4:18:15.20:279,15,0	1/1:11,0:11:3.90:37,4,0	1/1:21,0:19:6.01:114,6,0	1/1:17,0:14:3.01:43,3,0	0/0:9,0:11:15:0,15,316	0/0:10,0:10:6.02:0,6,120	0/0:15,0:15:12.04:0,12,260	1/1:7,4:15:6.02:225,6,0	1/1:21,0:20:30.06:849,30,0	1/1:10,0:13:3.01:67,3,0	1/1:6,0:10:9.03:295,9,0
chr10	77282532	.	TAG	T	71.84	PASS	AB=0.870;AC=8;AF=0.143;AN=56;BaseQRankSum=1.789;DP=346;FS=7.153;HRun=0;HaplotypeScore=65.3807;InbreedingCoeff=-0.1822;MQ=49.40;MQ0=12;MQRankSum=-1.587;QD=0.68;ReadPosRankSum=-2.221;VQSLOD=-0.1039;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:15.76:0,16,304	0/0:5,4:9:8.99:0,9,116	0/0:21,0:10:14.93:0,15,264	0/0:26,0:7:5.85:0,6,246	0/1:10,4:14:38.15:38,0,268	0/1:19,1:20:1.91:2,0,493	0/0:9,5:12:15.91:0,16,252	0/0:14,1:14:6.32:0,6,557	0/0:9,0:9:24.01:0,24,380	0/1:11,2:13:40.40:40,0,388	0/0:7,1:8:11.65:0,12,111	0/1:7,1:8:20.32:20,0,159	0/0:9,0:8:23.93:0,24,342	0/0:4,2:5:3:0,3,54	0/1:12,3:15:28.62:29,0,141	0/0:13,0:13:18.33:0,18,167	0/0:11,4:14:26.88:0,27,405	0/1:8,5:10:53.07:53,0,238	0/1:10,1:11:5.73:6,0,394	0/1:12,0:11:6.79:7,0,221	0/0:8,5:10:6.02:0,6,103	0/0:10,0:10:21.02:0,21,365	0/0:5,0:5:12.04:0,12,207	0/0:8,0:8:18.06:0,18,326	0/0:12,0:12:24.01:0,24,348	0/0:19,0:18:31.22:0,31,847	0/0:11,0:11:23.24:0,23,298	0/0:3,0:3:8.94:0,9,105
chr10	77282735	.	CGT	C	35.48	PASS	AB=0.906;AC=9;AF=0.180;AN=50;BaseQRankSum=0.899;DP=398;FS=0.000;HRun=0;HaplotypeScore=74.0615;InbreedingCoeff=-0.0084;MQ=39.35;MQ0=48;MQRankSum=-0.307;QD=0.33;ReadPosRankSum=0.205;VQSLOD=1.3699;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:23:5.69:0,6,45	0/0:4,0:4:3.99:0,4,15	./.	./.	0/0:13,0:13:4.73:0,5,49	0/1:16,0:16:0.34:0,0,0	0/0:17,0:15:2.22:0,2,19	0/0:23,0:14:0.94:0,1,2	0/1:6,1:5:21.34:21,0,123	0/0:15,0:14:20.84:0,21,137	0/0:9,0:8:2.99:0,3,24	0/1:14,3:16:60.84:61,0,264	0/1:14,0:13:9.35:9,0,263	0/0:5,0:4:2.52:0,3,23	0/1:6,0:5:0:0,0,0	0/0:8,0:7:2.68:0,3,11	0/0:15,0:14:12.46:0,12,70	0/0:12,0:9:3.59:0,4,11	0/0:16,0:12:3.47:0,3,27	0/0:14,0:13:0.91:0,1,2	./.	1/1:6,0:6:2.37:8,2,0	0/1:6,2:8:18.34:18,0,158	0/1:27,8:34:22.34:22,0,516	0/0:20,0:19:1.81:0,2,27	0/0:16,0:15:3.85:0,4,22	0/0:11,0:10:5.36:0,5,37	0/0:5,0:4:0.47:0,0,1
chr10	77282779	.	C	CGTGCGTGTGTGTGT	5794.22	PASS	AB=0.837;AC=24;AF=0.429;AN=56;BaseQRankSum=1.644;DP=435;FS=7.857;HRun=0;HaplotypeScore=148.3374;InbreedingCoeff=0.3450;MQ=45.40;MQ0=21;MQRankSum=-7.998;QD=24.45;ReadPosRankSum=0.010;VQSLOD=3.5123;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:27:9:239,9,0	0/0:2,2:6:0:0,0,0	0/0:15,0:7:15.05:0,15,512	0/1:19,0:8:12.56:13,0,300	0/0:20,0:19:33.10:0,33,936	0/1:12,0:12:34.65:96,0,35	1/1:20,0:16:9.03:210,9,0	0/1:14,0:12:4.69:637,0,5	0/0:19,0:17:40.34:0,40,1361	0/1:14,1:14:7.67:692,0,8	1/1:11,0:10:3.01:89,3,0	0/0:20,0:18:45.14:0,45,1463	0/0:26,0:26:60.08:0,60,1703	0/1:1,4:5:0:0,0,0	0/0:3,1:6:0:0,0,0	1/1:2,6:11:0.47:1,0,0	0/1:10,9:24:1.42:868,0,1	1/1:3,0:8:9.03:450,9,0	1/1:3,10:15:42.14:1421,42,0	0/0:3,8:16:3.46:0,3,24	1/1:5,4:11:0.66:7,1,0	0/0:4,0:3:9.03:0,9,328	0/0:8,0:7:18.03:0,18,545	0/0:37,0:36:72.19:0,72,2494	0/0:21,0:20:30.07:0,30,939	0/1:15,0:14:6.18:495,0,6	0/1:5,8:17:9.34:496,0,9	1/1:3,0:2:3.01:80,3,0
chr10	77284043	.	G	GC	2014.18	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.694;DP=740;FS=0.000;HRun=7;HaplotypeScore=77.0578;InbreedingCoeff=0.9999;MQ=79.28;MQ0=0;MQRankSum=-1.098;QD=33.02;ReadPosRankSum=0.553;VQSLOD=2.6599;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:38:65.37:0,65,193	0/0:20,0:20:51.05:0,51,485	0/0:19,0:19:47.98:0,48,445	0/0:27,0:27:45.02:0,45,415	1/1:1,26:27:75.23:905,75,0	0/0:20,0:20:54.08:0,54,521	0/0:25,0:25:66.10:0,66,637	0/0:24,0:24:63.09:0,63,605	0/0:24,0:24:69.11:0,69,666	0/0:31,0:31:81.13:0,81,782	0/0:23,0:23:57.08:0,57,544	0/0:35,0:35:99:0,99,951	0/0:23,0:23:69.09:0,69,660	0/0:22,0:22:66.11:0,66,637	0/0:33,0:32:53.89:0,54,798	0/0:46,0:46:99:0,129,1246	0/0:27,0:27:75.10:0,75,717	0/0:13,0:13:36.06:0,36,348	0/0:21,0:21:57.06:0,57,543	0/0:30,0:30:87.14:0,87,840	0/0:28,0:28:72.11:0,72,695	0/0:26,0:26:72.11:0,72,695	0/0:27,0:27:75.11:0,75,719	0/0:21,0:21:54.08:0,54,521	1/1:0,34:34:99:1231,102,0	0/0:32,0:32:93.15:0,93,897	0/0:30,0:29:87.14:0,87,840	0/0:14,0:14:39.06:0,39,377
chr10	77285459	.	AAAGC	A	420.73	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.671;DP=662;FS=0.000;HRun=0;HaplotypeScore=99.7519;InbreedingCoeff=0.9019;MQ=62.67;MQ0=1;MQRankSum=-0.760;QD=15.03;ReadPosRankSum=2.426;VQSLOD=3.0630;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,23:28:30.10:515,30,0	0/0:10,0:10:27.08:0,27,611	0/0:32,0:17:23.81:0,24,468	0/0:37,0:16:36.12:0,36,850	0/0:18,0:18:42.13:0,42,1006	0/0:20,0:20:48.16:0,48,1126	0/0:22,0:22:54.14:0,54,1236	0/0:43,0:41:99:0,99,2321	0/0:24,0:24:66.21:0,66,1532	0/0:24,0:24:57.20:0,57,1354	0/0:20,0:19:45.15:0,45,1118	0/0:25,0:25:72.25:0,72,1767	0/0:15,0:15:36.12:0,36,901	0/0:15,0:15:45.11:0,45,1001	0/0:25,0:25:72.23:0,72,1653	0/0:30,0:30:78.27:0,78,1863	0/0:23,0:23:48.16:0,48,1192	0/0:18,0:18:45.13:0,45,1076	0/0:36,0:36:75.24:0,75,1736	0/0:22,0:22:60.21:0,60,1407	0/0:21,0:21:60.21:0,60,1438	0/0:14,0:14:39.13:0,39,949	0/0:21,0:21:57.18:0,57,1256	0/0:20,0:20:60.21:0,60,1415	0/0:23,0:23:60.21:0,60,1480	0/0:47,0:47:99:0,126,3032	0/0:27,0:27:66.18:0,66,1545	0/0:2,0:2:6.02:0,6,151
chr10	77285666	.	A	AGCACGCACAAGCAAACAC	15033.66	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=1.661;DP=523;FS=2.175;HRun=0;HaplotypeScore=198.7066;InbreedingCoeff=0.7409;MQ=47.80;MQ0=18;MQRankSum=-7.610;QD=36.85;ReadPosRankSum=-3.689;VQSLOD=3.6003;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:41:44.64:1434,45,0	1/1:9,0:9:17.74:353,18,0	0/0:21,0:9:27.06:0,27,794	0/0:19,0:13:36.12:0,36,1397	1/1:8,0:8:9.03:225,9,0	1/1:21,0:20:20.77:461,21,0	1/1:35,0:35:16.75:829,17,0	1/1:29,0:29:66.45:1846,66,0	0/0:15,0:15:39.11:0,39,1374	1/1:23,0:23:45.94:1151,46,0	1/1:18,0:18:27.48:635,27,0	0/0:12,0:14:26.57:0,27,948	0/0:9,0:9:18.05:0,18,600	1/1:15,0:14:15.05:320,15,0	1/1:4,14:31:5.57:330,6,0	1/1:23,0:23:21.07:397,21,0	1/1:14,0:14:36.41:705,36,0	1/1:20,0:20:31:923,31,0	1/1:21,0:19:39.43:1249,39,0	1/1:12,0:13:26.23:529,26,0	1/1:14,0:13:14.90:400,15,0	0/1:4,0:4:37.82:38,0,131	0/0:15,0:15:35.42:0,35,843	0/0:22,0:21:3.20:0,3,1581	0/1:17,0:17:38.87:297,0,39	1/1:26,0:25:60.05:1913,60,0	1/1:19,0:18:27.06:787,27,0	1/1:6,0:6:6.02:212,6,0
chr10	77285670	.	C	CGCACAAGCAA	9456.33	PASS	AB=0.975;AC=25;AF=0.446;AN=56;BaseQRankSum=8.301;DP=556;FS=28.916;HRun=0;HaplotypeScore=181.4693;InbreedingCoeff=-0.1045;MQ=44.29;MQ0=24;MQRankSum=-8.883;QD=22.15;ReadPosRankSum=1.852;VQSLOD=2.7477;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:46,0:45:57.36:1027,57,0	0/1:10,0:10:16.29:198,0,16	0/0:19,0:7:21.07:0,21,540	0/0:19,0:13:36.11:0,36,1110	0/1:11,0:11:57.93:149,0,58	1/1:21,0:20:17.79:360,18,0	0/1:35,0:35:99:432,0,101	0/1:31,0:30:48.68:1335,0,49	0/0:20,0:20:48.10:0,48,1107	0/1:10,9:26:63.51:819,0,64	1/1:20,0:20:23.96:486,24,0	0/0:16,0:16:35.61:0,36,866	0/0:11,0:11:21.02:0,21,435	0/1:16,0:15:76.89:180,0,77	0/1:25,0:25:28.91:134,0,29	0/1:27,0:27:45.84:145,0,46	0/1:14,0:14:99:349,0,173	0/1:19,0:19:34.33:431,0,34	0/1:22,0:18:9.49:877,0,9	0/1:14,0:14:99:268,0,134	1/1:17,0:14:12.50:231,12,0	0/0:3,0:3:9.03:0,9,186	0/0:13,0:13:27.07:0,27,610	0/0:28,0:26:49.14:0,49,1521	0/1:22,0:22:99:142,0,182	0/1:25,0:24:17.95:1324,0,18	0/1:19,0:18:58.95:489,0,59	1/1:7,0:7:5.48:82,5,0
chr10	77285675	.	A	AAG	2502.28	PASS	AB=0.766;AC=19;AF=0.339;AN=56;BaseQRankSum=12.982;DP=518;FS=49.709;HRun=0;HaplotypeScore=106.8049;InbreedingCoeff=-0.3445;MQ=44.27;MQ0=25;MQRankSum=-8.144;QD=6.95;ReadPosRankSum=-0.855;VQSLOD=1.0886;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,18:42:99:214,0,252	0/1:3,6:9:8.79:95,0,9	0/0:18,0:6:18.06:0,18,274	0/0:18,0:12:33.11:0,33,510	0/1:5,4:9:61.69:62,0,80	0/1:7,12:19:55.80:123,0,56	0/1:18,11:29:96.02:96,0,119	0/1:26,0:25:99:449,0,299	0/0:19,0:19:48.11:0,48,730	0/1:21,0:21:99:149,0,176	1/1:17,1:18:17.51:185,18,0	0/0:16,0:16:35.90:0,36,528	0/0:10,0:10:18.06:0,18,273	0/1:11,5:15:83.21:83,0,142	0/0:28,0:28:12.08:0,12,183	0/1:10,12:23:22.84:23,0,128	0/1:12,0:12:44.64:45,0,200	0/1:11,7:18:86.97:87,0,158	0/1:12,9:17:99:335,0,199	0/1:13,0:13:55.81:56,0,137	0/1:11,5:14:35.37:35,0,38	0/0:3,0:3:9:0,9,95	0/0:12,0:12:24.08:0,24,351	0/0:28,0:26:69.23:0,69,1053	0/1:15,5:20:12.35:12,0,329	0/1:11,16:25:99:491,0,207	0/1:11,6:17:99:126,0,176	0/0:6,0:6:0.08:0,0,0
chr10	77287980	.	TACACACAG	T	7919.48	PASS	AB=1.000;AC=35;AF=0.648;AN=54;BaseQRankSum=8.807;DP=582;FS=3.502;HRun=0;HaplotypeScore=212.0559;InbreedingCoeff=0.8427;MQ=64.15;MQ0=1;MQRankSum=-8.621;QD=23.36;ReadPosRankSum=-0.720;VQSLOD=4.3566;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,4:34:17.79:293,18,0	1/1:1,7:8:9.03:229,9,0	0/0:23,0:19:41.29:0,41,1156	0/0:32,0:30:72.17:0,72,1761	0/0:10,0:10:15.05:0,15,475	1/1:10,10:20:21.03:385,21,0	1/1:13,4:17:24.03:360,24,0	1/1:25,2:27:48.07:730,48,0	0/0:26,0:26:69.22:0,69,2448	1/1:8,7:16:35.91:809,36,0	./.	0/0:34,0:34:99:0,99,3299	0/0:26,0:26:75.26:0,75,2576	1/1:12,11:23:18.06:378,18,0	1/1:13,13:26:21:349,21,0	1/1:9,16:25:21.07:459,21,0	1/1:13,5:18:27.01:390,27,0	1/1:5,7:11:26.97:552,27,0	1/1:1,12:13:33.09:583,33,0	1/1:6,5:11:3:25,3,0	1/1:22,5:27:9.01:105,9,0	0/0:21,0:21:57.18:0,57,1949	0/0:14,0:14:42.12:0,42,1307	0/0:45,0:45:99:0,126,4514	0/1:19,0:19:21.92:22,0,827	1/1:5,19:24:63.22:1574,63,0	1/1:8,7:15:30.10:596,30,0	1/1:1,3:4:3.01:80,3,0
chr10	77288037	.	ACG	A	1841.59	PASS	AB=0.695;AC=19;AF=0.339;AN=56;BaseQRankSum=12.298;DP=571;FS=10.239;HRun=0;HaplotypeScore=173.6797;InbreedingCoeff=0.2786;MQ=46.16;MQ0=6;MQRankSum=-10.011;QD=9.44;ReadPosRankSum=-0.343;VQSLOD=2.7341;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,3:23:5.89:0,6,26	1/1:1,5:6:11.46:114,11,0	0/0:36,0:12:8.78:0,9,283	0/0:38,0:8:3.01:0,3,225	0/0:12,0:12:27.05:0,27,461	1/1:5,10:15:2.53:45,3,0	0/1:21,3:24:15.53:16,0,349	0/0:21,0:20:16.18:0,16,737	0/0:28,0:28:78.21:0,78,1376	0/1:4,11:15:99:338,0,110	0/1:4,6:10:0:0,0,0	0/0:32,0:32:95.21:0,95,1524	0/0:28,0:28:84.05:0,84,1438	1/1:3,17:20:17.85:187,18,0	0/0:11,11:22:3.01:0,3,57	1/1:5,21:26:3.05:231,3,0	0/1:9,5:14:47.07:96,0,47	0/1:7,7:13:99:217,0,188	0/1:10,4:13:89.70:90,0,152	0/0:5,6:11:2.81:0,3,54	0/0:25,9:31:10.66:0,11,179	0/0:19,0:19:50.38:0,50,913	0/0:12,0:12:27.06:0,27,451	0/0:42,0:42:99:0,123,2338	0/0:17,0:17:33.01:0,33,618	0/1:8,17:25:99:549,0,219	1/1:5,6:11:9.03:121,9,0	1/1:0,1:1:0.47:1,0,0
chr10	77288044	.	GACAC	G	329.04	PASS	AB=0.970;AC=12;AF=0.214;AN=56;BaseQRankSum=10.605;DP=587;FS=4.859;HRun=0;HaplotypeScore=201.2875;InbreedingCoeff=0.1035;MQ=45.64;MQ0=5;MQRankSum=-8.442;QD=2.29;ReadPosRankSum=0.282;VQSLOD=2.5646;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:10.25:0,10,101	1/1:6,0:6:7.37:38,7,0	0/0:30,0:10:26.10:0,26,579	0/0:35,0:9:15.52:0,16,325	0/0:11,0:11:20.96:0,21,352	0/0:16,0:16:1.34:0,1,46	0/0:28,0:28:19.16:0,19,502	0/0:29,0:27:76.17:0,76,1726	0/0:30,0:30:84.26:0,84,2077	0/1:18,1:19:99:131,0,188	0/1:10,1:11:0.05:0,0,0	0/0:29,0:29:87.30:0,87,2280	0/0:28,0:28:81.28:0,81,2114	0/0:26,0:26:4.41:0,4,51	0/0:21,1:22:3.01:0,3,66	0/1:24,1:25:31.71:32,0,73	0/1:12,0:12:11.82:12,0,72	0/1:13,0:12:72.34:72,0,261	0/1:13,1:12:12.33:12,0,478	0/0:10,1:11:3.01:0,3,82	0/0:42,0:40:14.59:0,15,358	0/0:18,0:18:48.11:0,48,913	0/0:8,0:8:21.06:0,21,487	0/0:42,0:42:99:0,120,3036	0/0:14,0:14:21.05:0,21,509	0/1:28,0:28:99:131,0,394	1/1:13,0:13:0.61:32,1,0	0/1:3,0:3:2.45:6,0,2
chr10	77288052	.	GAC	G	1720.67	PASS	AB=0.705;AC=18;AF=0.321;AN=56;BaseQRankSum=11.991;DP=586;FS=4.465;HRun=0;HaplotypeScore=176.1565;InbreedingCoeff=0.1630;MQ=45.95;MQ0=5;MQRankSum=-8.400;QD=7.68;ReadPosRankSum=-2.980;VQSLOD=3.0126;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:11.72:0,12,92	1/1:2,4:6:8.94:90,9,0	0/0:29,0:10:18.01:0,18,356	0/0:35,0:9:8.17:0,8,239	0/0:9,0:9:8.98:0,9,165	0/1:8,7:15:37.39:68,0,37	0/1:21,5:26:11.88:12,0,356	0/0:35,0:32:69.16:0,69,1305	0/0:32,0:32:90.31:0,90,1556	0/1:8,13:21:96.93:366,0,97	0/1:7,4:11:0:0,0,0	0/0:30,0:30:90.31:0,90,1587	0/0:27,0:27:81.28:0,81,1439	1/1:10,16:26:21.43:155,21,0	0/0:17,6:23:3.01:0,3,45	0/1:7,17:24:23.67:144,0,24	0/1:7,5:12:57.20:103,0,57	0/1:11,6:16:99:258,0,162	0/1:12,2:12:35.93:36,0,308	0/1:5,6:11:12.29:12,0,49	0/0:37,7:40:14:0,14,244	0/0:13,0:13:27.04:0,27,411	0/0:8,0:7:18.06:0,18,320	0/0:41,0:41:99:0,117,2032	0/0:13,0:13:21.07:0,21,378	0/1:11,16:27:99:477,0,223	1/1:8,3:11:8.23:77,8,0	1/1:0,3:3:8.99:94,9,0
chr10	77288070	.	G	GACACAC	1101.71	PASS	AB=0.964;AC=17;AF=0.315;AN=54;BaseQRankSum=10.194;DP=568;FS=4.606;HRun=0;HaplotypeScore=173.7435;InbreedingCoeff=0.0539;MQ=46.17;MQ0=24;MQRankSum=-7.696;QD=4.42;ReadPosRankSum=3.236;VQSLOD=2.1562;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,17:29:1.36:32,0,1	1/1:3,0:3:2.60:38,3,0	0/1:23,0:9:25.88:26,0,134	0/1:27,0:11:28.51:29,0,92	0/0:5,0:5:15.05:0,15,314	0/0:15,0:14:10.98:0,11,103	0/0:28,0:27:13.95:0,14,296	0/0:45,0:37:99:0,102,967	0/0:26,0:26:72.23:0,72,1484	0/1:24,0:24:99:303,0,258	0/1:9,0:8:0.25:1,0,0	0/0:28,0:28:78.09:0,78,1518	0/0:28,0:28:84.11:0,84,1727	0/1:25,0:22:25.93:49,0,26	./.	1/1:27,0:23:8.69:122,9,0	0/1:12,0:12:17.14:156,0,17	0/1:16,0:15:61.74:109,0,62	0/1:15,0:12:56.33:56,0,120	0/0:11,0:10:2.77:0,3,40	0/0:47,0:41:5.83:0,6,60	0/0:8,0:8:21.03:0,21,351	0/0:8,0:7:18.02:0,18,235	0/0:38,0:38:99:0,108,2099	0/0:12,0:12:32.47:0,32,661	0/1:22,0:21:86.47:216,0,86	0/1:12,0:12:19.53:65,0,20	1/1:4,0:3:8.22:59,8,0
chr10	77288072	.	CAG	C	1656.41	PASS	AB=0.815;AC=17;AF=0.315;AN=54;BaseQRankSum=5.900;DP=572;FS=9.854;HRun=0;HaplotypeScore=130.4428;InbreedingCoeff=-0.0981;MQ=46.79;MQ0=24;MQRankSum=-4.612;QD=5.28;ReadPosRankSum=-0.173;VQSLOD=2.5827;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:31:28.54:29,0,29	0/0:2,0:2:1.25:0,1,3	0/0:23,0:9:21.64:0,22,165	0/1:26,0:11:4.13:4,0,127	0/0:5,0:5:3.94:0,4,184	0/1:12,3:14:63.28:63,0,94	0/1:19,7:25:75.57:76,0,264	0/1:36,10:38:99:250,0,513	0/0:25,0:25:60.07:0,60,1045	0/1:15,10:25:99:318,0,193	0/1:5,3:7:0:0,0,0	0/0:28,0:28:78.02:0,78,1166	0/0:28,0:28:84.11:0,84,1414	0/1:13,12:22:37.63:106,0,38	./.	0/1:14,11:21:6.20:91,0,6	0/1:10,3:13:14.19:52,0,14	0/1:12,3:14:25.40:157,0,25	0/1:13,2:12:99:100,0,103	0/0:8,4:11:1.86:0,2,23	0/0:45,3:42:4.55:0,5,46	0/0:8,0:8:21.03:0,21,300	0/0:9,0:8:23.98:0,24,237	0/0:38,0:38:97.02:0,97,1468	0/0:12,0:12:33:0,33,547	0/1:20,6:25:99:385,0,131	1/1:10,3:13:8.78:90,9,0	1/1:0,4:3:8.98:88,9,0
chr10	77288074	.	G	GACAGAC	6454.48	PASS	AB=0.947;AC=33;AF=0.611;AN=54;BaseQRankSum=7.594;DP=579;FS=32.436;HRun=0;HaplotypeScore=148.2563;InbreedingCoeff=0.6757;MQ=47.42;MQ0=23;MQRankSum=-6.318;QD=16.99;ReadPosRankSum=-1.818;VQSLOD=2.7389;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:30:0.26:61,0,0	1/1:3,0:3:5.97:105,6,0	0/0:24,0:9:18.33:0,18,143	0/1:25,0:11:8.51:9,0,123	0/0:4,0:5:15.03:0,15,214	0/1:13,0:15:28.59:97,0,29	1/1:24,0:25:3.55:361,4,0	1/1:39,0:37:92.73:935,93,0	0/0:24,0:25:69.11:0,69,1227	1/1:21,0:25:32.94:1228,33,0	0/1:8,0:7:0.38:1,0,0	0/0:26,0:26:72.14:0,72,1338	0/0:28,0:28:81.24:0,81,1595	1/1:19,0:23:23.91:441,24,0	./.	1/1:14,11:22:15.05:376,15,0	1/1:6,7:13:17.05:386,17,0	1/1:8,0:14:19.80:473,20,0	1/1:18,0:16:5.45:351,5,0	1/1:9,0:11:6.01:80,6,0	1/1:27,0:42:5.16:49,5,0	0/0:8,0:8:15.04:0,15,272	0/0:9,0:8:14.99:0,15,139	0/0:34,0:35:99:0,102,1561	0/0:12,0:12:33:0,33,617	1/1:16,0:26:53.43:1059,53,0	1/1:12,0:12:9.03:213,9,0	1/1:4,0:3:9.03:229,9,0
chr10	77288076	.	C	CAGACAG	5793.11	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=10.097;DP=593;FS=31.104;HRun=0;HaplotypeScore=150.1417;InbreedingCoeff=0.4199;MQ=48.02;MQ0=24;MQRankSum=-7.657;QD=16.55;ReadPosRankSum=0.512;VQSLOD=2.5338;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:30:11:11,0,44	1/1:3,0:3:2.96:99,3,0	0/0:31,0:13:20.71:0,21,281	0/0:27,0:12:9.41:0,9,235	0/0:6,0:6:15.05:0,15,250	0/1:16,0:15:52.75:53,0,56	0/1:27,0:26:26.08:447,0,26	1/1:44,0:36:32.82:916,33,0	0/0:26,0:26:71.77:0,72,1384	1/1:25,0:25:25.01:1172,25,0	0/0:9,0:8:2.31:0,2,26	0/0:25,0:25:72.23:0,72,1538	0/0:28,0:28:81.28:0,81,1802	1/1:27,0:24:5:342,5,0	0/0:28,0:25:5.99:0,6,48	0/1:28,0:24:5.91:305,0,6	1/1:13,0:13:3.37:264,3,0	0/1:15,0:14:9.76:440,0,10	0/1:19,0:17:76.46:305,0,76	1/1:12,0:11:6.01:61,6,0	1/1:47,0:41:4.45:97,4,0	0/0:7,0:7:15.04:0,15,291	0/0:7,0:6:15.05:0,15,229	0/0:35,0:35:99:0,102,1947	0/0:14,0:14:36.11:0,36,713	1/1:26,1:26:11.27:898,11,0	1/1:4,6:12:8.99:205,9,0	1/1:4,0:3:9.03:179,9,0
chr10	77289209	.	A	ACAT	24185.69	PASS	AB=0.900;AC=41;AF=0.732;AN=56;BaseQRankSum=-2.409;DP=528;FS=11.668;HRun=0;HaplotypeScore=81.1049;InbreedingCoeff=0.9069;MQ=69.54;MQ0=0;MQRankSum=-7.483;QD=56.77;ReadPosRankSum=0.326;VQSLOD=6.4803;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:39:99:1669,99,0	1/1:2,13:15:36.12:813,36,0	0/0:12,0:11:33.11:0,33,562	0/0:13,0:12:30.10:0,30,503	1/1:3,13:16:42.14:944,42,0	1/1:1,19:20:57.20:1313,57,0	1/1:3,18:22:57.20:1281,57,0	1/1:6,23:29:78.24:1626,78,0	0/0:24,0:24:72.22:0,72,1175	1/1:3,13:17:51.11:1067,51,0	1/1:4,16:20:54.19:1225,54,0	0/0:13,0:13:36.12:0,36,611	0/0:16,0:16:48.16:0,48,817	1/1:1,13:15:35.78:816,36,0	1/1:1,22:23:60.21:1374,60,0	1/1:1,14:15:39.13:899,39,0	1/1:4,27:31:78.26:1790,78,0	1/1:4,21:26:69.21:1487,69,0	1/1:4,16:20:60.19:1326,60,0	1/1:2,18:20:57.20:1310,57,0	1/1:1,9:10:18.06:413,18,0	0/1:8,1:9:42.08:42,0,374	0/0:15,0:15:42.12:0,42,660	0/0:9,0:9:24.07:0,24,383	1/1:4,9:13:30.10:662,30,0	1/1:5,20:25:72.25:1608,72,0	1/1:4,19:23:60.21:1376,60,0	1/1:2,15:17:51.18:1146,51,0
chr10	77289591	.	TAAAC	T	1662.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.693;DP=707;FS=1.397;HRun=0;HaplotypeScore=113.9150;InbreedingCoeff=0.9990;MQ=69.52;MQ0=1;MQRankSum=-2.696;QD=36.13;ReadPosRankSum=2.921;VQSLOD=4.0140;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,44:44:99:1757,99,0	0/0:11,0:11:27.09:0,27,692	0/0:36,0:28:66.20:0,66,1518	0/0:30,0:27:57.45:0,57,1311	0/0:28,0:28:81.23:0,81,1927	0/0:20,0:20:57.20:0,57,1442	0/0:24,0:24:69.18:0,69,1702	0/0:30,0:30:75.26:0,75,1883	0/0:23,0:23:63.22:0,63,1593	0/0:24,0:24:66.22:0,66,1651	0/0:18,0:18:48.16:0,48,1178	0/0:19,0:19:54.19:0,54,1310	0/0:26,0:26:78.27:0,78,1960	0/0:24,0:24:57.20:0,57,1440	0/0:23,0:23:51.18:0,51,1263	0/0:32,0:32:93.29:0,93,2259	0/0:26,0:26:69.21:0,69,1703	0/0:36,0:36:96.22:0,96,2309	0/0:21,0:21:54.17:0,54,1337	0/0:21,0:21:57.20:0,57,1442	0/0:29,0:29:66.23:0,66,1652	0/0:23,0:23:60.21:0,60,1525	0/0:23,0:23:60.19:0,60,1489	0/0:27,0:27:69.24:0,69,1709	0/0:17,0:17:48.10:0,48,1164	0/0:32,0:32:93.31:0,93,2308	0/0:19,0:19:54.17:0,54,1285	0/0:19,0:19:57.20:0,57,1444
chr10	77290569	.	C	CA	7396.05	PASS	AB=0.773;AC=34;AF=0.607;AN=56;BaseQRankSum=-11.008;DP=703;FS=1.046;HRun=12;HaplotypeScore=80.4568;InbreedingCoeff=0.7628;MQ=74.24;MQ0=0;MQRankSum=-0.102;QD=16.77;ReadPosRankSum=-1.903;VQSLOD=5.1450;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:45:64.55:0,65,715	1/1:3,6:9:15.02:146,15,0	0/0:16,0:16:16.91:0,17,115	0/0:19,0:19:13.08:0,13,158	0/0:28,0:30:63.65:0,64,448	1/1:2,13:15:36.06:350,36,0	1/1:5,17:22:23.16:387,23,0	1/1:8,27:37:64.90:765,65,0	0/0:23,0:23:20.43:0,20,279	1/1:7,28:36:80.87:742,81,0	1/1:5,15:22:24.05:350,24,0	0/0:27,0:27:53.53:0,54,394	0/0:21,0:22:15.60:0,16,260	1/1:6,11:17:5.15:212,5,0	1/1:5,26:31:41.19:562,41,0	1/1:7,23:30:38.66:533,39,0	1/1:5,16:21:45.04:430,45,0	1/1:5,24:29:54.09:525,54,0	0/1:7,8:16:10.57:174,0,11	1/1:4,29:34:83.83:768,84,0	1/1:7,18:25:1.24:331,1,0	0/1:26,3:29:17.42:17,0,350	0/0:29,0:29:64.64:0,65,478	0/0:21,0:22:55.67:0,56,397	0/0:26,0:26:59.50:0,60,436	1/1:7,20:27:0.34:463,0,0	1/1:4,15:21:16.82:297,17,0	1/1:6,13:20:19.99:343,20,0
chr10	77290827	.	CCT	C	1478.74	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.318;DP=700;FS=3.851;HRun=0;HaplotypeScore=84.1772;InbreedingCoeff=0.9448;MQ=92.32;MQ0=1;MQRankSum=-4.733;QD=34.39;ReadPosRankSum=-0.645;VQSLOD=5.3841;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,40:42:99:1574,111,0	0/0:3,0:3:9.03:0,9,165	0/0:31,0:31:57.28:0,57,1189	0/0:29,1:30:31.93:0,32,1235	0/0:25,0:25:75.26:0,75,1348	0/0:24,0:24:69.20:0,69,1203	0/0:22,0:22:63.19:0,63,1086	0/0:29,0:29:87.27:0,87,1477	0/0:24,0:24:72.25:0,72,1305	0/0:34,0:34:99:0,99,1748	0/0:17,0:17:48.16:0,48,879	0/0:24,0:24:69.24:0,69,1264	0/0:19,0:19:54.16:0,54,915	0/0:25,0:25:72.25:0,72,1320	0/0:46,0:46:99:0,138,2530	0/0:31,0:31:93.32:0,93,1639	0/0:33,0:33:90.29:0,90,1618	0/0:23,0:23:69.24:0,69,1263	0/0:20,0:20:57.18:0,57,982	0/0:26,0:26:69.22:0,69,1232	0/0:32,0:32:87.28:0,87,1538	0/0:20,0:20:60.21:0,60,1100	0/0:17,0:17:51.17:0,51,932	0/0:26,0:26:78.27:0,78,1429	0/0:21,0:21:54.19:0,54,989	0/0:26,0:26:66.22:0,66,1173	0/0:18,0:18:54.19:0,54,990	0/0:11,0:11:33.11:0,33,605
chr10	77291237	.	AC	A	4112.46	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=11.739;DP=619;FS=7.797;HRun=1;HaplotypeScore=114.5148;InbreedingCoeff=0.8866;MQ=59.00;MQ0=5;MQRankSum=-7.440;QD=8.92;ReadPosRankSum=-4.441;VQSLOD=-0.7611;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,2:20:54.42:457,54,0	0/1:8,0:8:4.57:48,0,5	0/0:31,0:18:28.14:0,28,411	0/0:14,2:10:20.06:0,20,175	1/1:22,1:23:44.55:283,45,0	1/1:21,1:22:1.14:139,1,0	1/1:16,0:16:26.30:145,26,0	1/1:28,1:29:28.44:234,28,0	0/0:15,0:15:45.10:0,45,513	1/1:32,4:35:51.14:435,51,0	1/1:20,1:21:42.52:239,43,0	0/0:19,0:19:54.12:0,54,644	0/0:18,0:18:54.10:0,54,602	1/1:19,0:19:20.85:100,21,0	1/1:21,2:23:10.89:160,11,0	1/1:32,1:32:36.96:219,37,0	1/1:35,1:35:40.87:236,41,0	1/1:16,1:16:15.74:97,16,0	1/1:21,2:23:47.67:291,48,0	1/1:19,3:22:38.84:221,39,0	1/1:19,0:19:12.57:63,13,0	0/0:21,0:21:57.21:0,57,696	0/0:20,0:20:60.11:0,60,671	0/0:18,0:17:54.07:0,54,592	1/1:24,2:26:29.10:172,29,0	1/1:27,0:27:43.05:232,43,0	1/1:25,0:25:26.58:154,27,0	1/1:15,1:16:32.37:188,32,0
chr10	77291246	.	C	CAA	8983.31	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=8.692;DP=653;FS=4.696;HRun=7;HaplotypeScore=117.6030;InbreedingCoeff=0.8955;MQ=57.66;MQ0=5;MQRankSum=-5.652;QD=20.19;ReadPosRankSum=-3.662;VQSLOD=2.4871;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:1.67:51,2,0	1/1:1,9:10:12.04:182,12,0	0/0:31,0:15:14.87:0,15,256	0/0:16,0:11:2.77:0,3,138	0/0:24,0:24:1.37:0,1,235	1/1:3,14:19:33.11:486,33,0	1/1:12,5:17:40.53:492,41,0	1/1:12,21:34:58.81:742,59,0	0/0:13,0:13:36.11:0,36,419	1/1:12,25:36:57.27:898,57,0	1/1:8,16:24:44.64:552,45,0	0/0:20,0:20:54.13:0,54,607	0/0:16,0:16:48.13:0,48,550	1/1:7,14:22:22.16:269,22,0	1/1:6,18:24:38.49:560,38,0	1/1:11,24:37:57.45:783,57,0	1/1:5,28:33:51.13:754,51,0	1/1:4,15:18:14.94:211,15,0	1/1:17,4:21:40.20:451,40,0	1/1:6,20:27:57.04:782,57,0	1/1:2,16:20:15.04:222,15,0	0/0:20,0:20:54.10:0,54,602	0/0:24,0:24:72.20:0,72,822	0/0:18,0:17:45.13:0,45,523	0/0:26,0:26:25.51:0,26,331	1/1:7,22:30:60.42:737,60,0	1/1:8,16:26:30.56:396,31,0	1/1:5,9:14:30.06:413,30,0
chr10	77291538	.	CA	C	1179.38	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.752;DP=745;FS=8.651;HRun=8;HaplotypeScore=82.3432;InbreedingCoeff=0.8951;MQ=77.72;MQ0=0;MQRankSum=-2.538;QD=24.07;ReadPosRankSum=-0.680;VQSLOD=3.6871;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,46:49:99:1274,132,0	0/0:5,0:5:15.04:0,15,171	0/0:17,1:18:10.14:0,10,397	0/0:15,0:15:24.01:0,24,279	0/0:34,0:34:96.23:0,96,1123	0/0:26,0:26:69.21:0,69,834	0/0:31,0:31:87.23:0,87,1016	0/0:36,0:36:93.24:0,93,1067	0/0:24,0:24:66.20:0,66,796	0/0:31,0:31:78.23:0,78,933	0/0:23,0:23:60.17:0,60,713	0/0:30,0:30:78.23:0,78,933	0/0:22,0:22:63.17:0,63,735	0/0:26,0:26:75.21:0,75,882	0/0:30,0:30:84.25:0,84,1003	0/0:39,0:39:99:0,105,1258	0/0:41,0:41:99:0,123,1471	0/0:24,1:25:43.17:0,43,761	0/0:10,0:10:30.08:0,30,343	0/0:27,0:27:81.21:0,81,960	0/0:52,0:52:99:0,152,1765	0/0:32,0:32:90.26:0,90,1067	0/0:26,0:26:78.24:0,78,942	0/0:20,0:20:57.16:0,57,676	0/0:13,0:13:36.11:0,36,435	0/0:19,2:21:9.55:0,10,602	0/0:24,0:24:57.16:0,57,677	0/0:15,0:15:39.12:0,39,471
chr10	77293612	.	C	CGT	12519.21	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-9.895;DP=470;FS=7.968;HRun=0;HaplotypeScore=64.2035;InbreedingCoeff=0.9726;MQ=68.76;MQ0=0;MQRankSum=-0.576;QD=40.52;ReadPosRankSum=5.177;VQSLOD=6.2031;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:28.48:0,28,387	1/1:0,4:4:12.04:214,12,0	0/0:10,0:8:20.98:0,21,268	0/0:9,0:8:20.84:0,21,243	0/0:11,0:11:21.07:0,21,297	1/1:3,15:20:60.11:968,60,0	1/1:1,20:22:48.15:839,48,0	1/1:4,12:20:51.12:742,51,0	0/0:13,0:13:36.12:0,36,554	1/1:1,13:15:42.14:705,42,0	1/1:0,6:8:24.08:397,24,0	0/0:20,0:20:60.18:0,60,903	0/0:19,0:19:57.09:0,57,848	1/1:1,21:23:57.19:991,57,0	1/1:1,17:18:42.14:709,42,0	1/1:1,18:19:41.93:751,42,0	1/1:1,30:33:78.07:1354,78,0	1/1:0,19:20:54.17:933,54,0	1/1:4,10:18:42.04:572,42,0	1/1:0,10:13:30.09:494,30,0	1/1:1,36:40:83.34:1433,83,0	0/0:18,0:18:45.11:0,45,642	0/0:2,0:2:6.02:0,6,79	0/0:26,0:26:75.25:0,75,1185	0/0:13,0:13:18.05:0,18,246	1/1:0,14:15:45.12:754,45,0	1/1:3,10:14:30.05:448,30,0	1/1:0,7:7:12.04:216,12,0
chr10	77294268	.	GAAAGCAGCGGCTC	G	920.96	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.773;DP=433;FS=6.159;HRun=0;HaplotypeScore=152.8408;InbreedingCoeff=0.6369;MQ=79.79;MQ0=0;MQRankSum=-5.779;QD=41.86;ReadPosRankSum=-2.277;VQSLOD=2.6191;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,13:22:36.07:1015,36,0	0/0:6,0:6:15.05:0,15,854	0/0:9,0:9:15.05:0,15,833	0/0:15,0:15:33.10:0,33,1271	0/0:2,0:2:6.02:0,6,387	0/0:3,0:3:9.03:0,9,430	0/0:33,0:33:81.28:0,81,4423	0/0:16,0:16:42.14:0,42,1993	0/0:12,0:12:30.10:0,30,1825	0/0:14,0:14:36.12:0,36,2009	0/0:5,0:5:15.05:0,15,751	0/0:26,0:26:75.26:0,75,4604	0/0:6,0:6:12.04:0,12,711	0/0:19,0:19:48.16:0,48,3013	0/0:9,0:9:21.07:0,21,1311	0/0:10,0:10:27.09:0,27,1720	0/0:42,0:42:99:0,126,7617	0/0:26,0:26:75.26:0,75,3956	0/0:22,0:22:54.12:0,54,2762	0/0:7,0:7:18.06:0,18,872	0/0:47,0:47:99:0,129,7687	0/0:4,0:4:9.03:0,9,515	0/0:1,0:1:2.99:0,3,23	0/0:36,0:36:99:0,99,6122	0/0:9,0:9:24.08:0,24,1471	0/0:15,0:15:39.13:0,39,2273	0/0:13,0:13:29.59:0,30,1318	0/0:4,0:4:9.03:0,9,425
chr10	77296282	.	T	TG	1382.42	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.379;DP=644;FS=1.355;HRun=4;HaplotypeScore=61.5056;InbreedingCoeff=0.9899;MQ=80.64;MQ0=0;MQRankSum=-3.681;QD=36.38;ReadPosRankSum=0.712;VQSLOD=3.8473;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:38:99:1477,108,0	0/0:6,0:6:18.05:0,18,204	0/0:26,0:23:46.57:0,47,580	0/0:20,0:20:51.14:0,51,572	0/0:27,0:27:75.21:0,75,851	0/0:20,0:20:54.15:0,54,612	0/0:24,0:24:63.18:0,63,715	0/0:30,0:30:75.15:0,75,814	0/0:29,0:29:81.23:0,81,918	0/0:23,0:23:63.17:0,63,706	0/0:24,0:24:63.18:0,63,715	0/0:19,0:19:51.14:0,51,578	0/0:25,0:25:69.20:0,69,782	0/0:11,0:11:24.07:0,24,272	0/0:25,0:25:66.19:0,66,749	0/0:22,0:21:60.15:0,60,671	0/0:33,0:33:93.26:0,93,1053	0/0:26,0:26:72.20:0,72,817	0/0:15,0:15:45.13:0,45,507	0/0:17,0:17:48.12:0,48,535	0/0:31,0:31:87.23:0,87,977	0/0:29,0:29:78.22:0,78,884	0/0:23,0:23:69.17:0,69,769	0/0:28,0:27:81.23:0,81,919	0/0:23,0:23:66.17:0,66,739	0/0:14,0:14:39.11:0,39,442	0/0:20,0:20:60.16:0,60,670	0/0:16,0:16:45.11:0,45,499
chr10	77296381	.	G	GA	942.40	PASS	AB=0.803;AC=6;AF=0.107;AN=56;BaseQRankSum=4.388;DP=527;FS=0.000;HRun=11;HaplotypeScore=60.6432;InbreedingCoeff=0.4686;MQ=62.79;MQ0=3;MQRankSum=1.562;QD=11.63;ReadPosRankSum=-0.839;VQSLOD=2.8597;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,19:35:5.13:538,5,0	0/0:3,0:4:7.99:0,8,52	0/0:12,0:6:4.10:0,4,26	0/0:16,0:9:0.96:0,1,38	0/1:7,13:20:23.70:305,0,24	0/0:20,1:21:23.35:0,23,364	0/0:14,0:14:35.59:0,36,268	0/0:26,0:24:41.15:0,41,324	0/0:15,0:15:26.84:0,27,209	0/0:20,0:20:50.80:0,51,395	0/0:12,0:12:29.87:0,30,229	0/0:16,0:18:42.91:0,43,312	0/0:14,0:14:32.83:0,33,255	0/0:17,0:19:40.85:0,41,305	0/0:27,0:29:73.73:0,74,561	0/0:19,0:19:43.64:0,44,330	0/0:28,0:28:62.55:0,63,484	0/0:21,1:22:16.20:0,16,299	0/1:14,0:14:14.37:14,0,152	0/0:15,0:15:20.89:0,21,162	0/0:21,0:23:51.86:0,52,383	0/0:25,0:27:61.45:0,61,457	0/0:14,0:14:29.85:0,30,232	0/0:30,0:31:79.70:0,80,606	1/1:2,9:12:23.72:211,24,0	0/0:20,0:20:47.79:0,48,369	0/0:16,0:16:38.74:0,39,293	0/0:9,0:10:19.95:0,20,144
chr10	77296494	.	G	GTTGTT	28255.49	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-14.026;DP=662;FS=7.970;HRun=0;HaplotypeScore=92.0264;InbreedingCoeff=0.9986;MQ=68.46;MQ0=2;MQRankSum=-5.984;QD=58.74;ReadPosRankSum=0.502;VQSLOD=5.3606;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,42:48:66.36:2319,66,0	1/1:1,13:15:39.13:1159,39,0	0/0:37,0:31:56.55:0,57,1016	0/0:27,0:22:21.35:0,21,513	1/1:0,22:23:57.15:1609,57,0	1/1:2,28:30:63.22:1897,63,0	1/1:3,13:16:33.11:973,33,0	1/1:12,27:43:99:2344,99,0	0/0:21,0:21:54.17:0,54,1051	1/1:4,23:28:72.19:1880,72,0	1/1:1,17:20:50.96:1069,51,0	0/0:21,0:21:54.12:0,54,1038	0/0:16,0:16:48.16:0,48,941	1/1:3,10:13:27.09:793,27,0	1/1:1,14:15:36.12:1085,36,0	1/1:1,19:20:36.12:1084,36,0	1/1:0,31:33:69.24:2079,69,0	1/1:5,16:23:33.07:924,33,0	1/1:6,18:24:63.09:1404,63,0	1/1:1,17:20:54.18:1540,54,0	1/1:4,13:18:36.12:1013,36,0	0/0:16,0:16:40.01:0,40,689	0/0:12,0:12:33.06:0,33,574	0/0:30,0:30:84.29:0,84,1681	1/1:1,21:23:51.18:1536,51,0	1/1:3,21:26:66.14:1634,66,0	1/1:3,21:26:42.11:1191,42,0	1/1:5,10:15:24.08:723,24,0
chr10	77297480	.	TC	T	3863.89	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=0.412;DP=411;FS=40.596;HRun=1;HaplotypeScore=57.8551;InbreedingCoeff=0.3439;MQ=53.03;MQ0=20;MQRankSum=-4.717;QD=10.91;ReadPosRankSum=0.223;VQSLOD=-0.4795;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:21:50.45:50,0,185	1/1:8,1:8:22.70:179,23,0	0/0:24,0:5:4.49:0,4,55	0/1:37,0:14:8.80:9,0,64	0/1:21,0:19:79.61:80,0,95	1/1:12,0:12:32.25:235,32,0	1/1:10,0:10:24.85:156,25,0	1/1:24,0:23:55.95:389,56,0	0/0:6,0:6:14.01:0,14,107	1/1:14,0:12:26.85:196,27,0	1/1:11,2:11:21.86:203,22,0	0/0:15,0:15:13.91:0,14,184	0/1:11,0:11:3.18:3,0,91	1/1:8,0:7:20.77:150,21,0	1/1:14,0:14:38.83:352,39,0	1/1:6,1:7:16.68:110,17,0	1/1:21,0:19:32.89:241,33,0	1/1:12,1:10:29.61:201,30,0	1/1:18,0:16:30.36:259,30,0	1/1:23,0:22:5.06:275,5,0	1/1:3,0:3:4.50:21,4,0	0/1:3,0:3:7.88:26,0,8	0/1:11,0:11:10.40:10,0,46	0/0:12,0:12:21.32:0,21,171	0/1:20,0:19:24.18:24,0,190	1/1:20,0:20:55.09:424,55,0	1/1:15,1:16:23.44:242,23,0	1/1:3,0:2:5.47:29,5,0
chr10	77300239	.	A	AAAAC	11730.46	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=6.973;DP=441;FS=29.729;HRun=0;HaplotypeScore=110.9574;InbreedingCoeff=0.7681;MQ=46.00;MQ0=19;MQRankSum=-5.449;QD=35.65;ReadPosRankSum=-0.550;VQSLOD=2.6898;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:83.84:0,84,1298	1/1:6,2:8:12.04:222,12,0	0/0:35,0:11:24.07:0,24,338	0/0:46,0:15:4.14:0,4,384	1/1:4,4:7:14.97:244,15,0	1/1:6,7:13:27.09:607,27,0	1/1:13,4:16:27.09:508,27,0	1/1:3,10:10:24.08:399,24,0	1/1:15,0:15:30.10:544,30,0	1/1:6,4:8:18.06:334,18,0	1/1:8,2:9:6.02:98,6,0	1/1:18,1:19:38.49:729,38,0	1/1:9,1:10:24.08:461,24,0	1/1:7,2:9:18.06:333,18,0	1/1:6,6:12:26.50:526,26,0	1/1:6,6:12:32.84:621,33,0	1/1:11,10:21:43.38:885,43,0	1/1:4,9:13:28.91:676,29,0	1/1:10,2:11:18.06:306,18,0	1/1:10,1:10:15.05:233,15,0	1/1:8,4:10:6.17:384,6,0	1/1:11,0:11:26.97:430,27,0	1/1:17,0:16:33.11:622,33,0	1/1:19,2:19:24.55:466,25,0	1/1:8,2:10:27.09:469,27,0	1/1:17,8:25:48.16:935,48,0	1/1:6,7:13:6.35:628,6,0	1/1:5,1:6:3.01:70,3,0
chr10	77300261	.	C	CA	384.02	PASS	AB=0.873;AC=12;AF=0.214;AN=56;BaseQRankSum=5.584;DP=511;FS=9.310;HRun=4;HaplotypeScore=134.3133;InbreedingCoeff=-0.0629;MQ=37.83;MQ0=41;MQRankSum=-3.256;QD=2.93;ReadPosRankSum=-1.723;VQSLOD=-0.7144;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.25:0,84,1004	0/0:5,0:5:12.02:0,12,130	0/0:83,0:15:32.92:0,33,362	0/0:97,0:22:52.39:0,52,599	0/1:14,1:14:21.79:22,0,206	0/0:13,0:13:30.07:0,30,334	0/0:16,0:13:22.23:0,22,214	0/0:11,0:8:23.56:0,24,259	1/1:9,2:11:0.94:111,1,0	0/0:10,0:9:21.06:0,21,247	0/1:7,0:5:17.42:17,0,63	0/1:8,4:12:10.85:126,0,11	0/1:8,2:10:0.80:41,0,1	0/1:7,0:7:8.86:9,0,104	0/0:13,0:13:33.05:0,33,344	0/0:11,0:11:20.83:0,21,210	0/0:19,1:20:12.03:0,12,384	0/0:14,0:13:38.32:0,38,390	0/0:13,0:12:26.66:0,27,285	0/0:8,0:8:18.03:0,18,195	0/1:15,0:11:13.79:14,0,179	0/1:8,3:10:17.52:18,0,98	0/1:4,5:8:7.25:37,0,7	0/1:15,6:18:31.58:118,0,32	0/1:13,0:13:13.44:13,0,106	0/0:19,0:19:0.26:0,0,290	0/0:12,0:13:5.08:0,5,339	0/0:3,0:2:3.01:0,3,30
chr10	77300263	.	AAC	A	596.82	PASS	AB=0.895;AC=11;AF=0.196;AN=56;BaseQRankSum=7.375;DP=505;FS=7.150;HRun=0;HaplotypeScore=133.8174;InbreedingCoeff=-0.0067;MQ=37.46;MQ0=43;MQRankSum=-4.197;QD=5.33;ReadPosRankSum=-0.145;VQSLOD=2.2831;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:87.29:0,87,1617	0/0:5,0:5:12.04:0,12,200	0/0:82,0:15:41.98:0,42,616	0/0:96,0:21:46.50:0,47,864	0/0:14,0:13:16.83:0,17,210	0/0:13,0:13:30.10:0,30,543	0/0:16,0:13:23.82:0,24,350	0/0:12,0:9:26.89:0,27,435	1/1:4,6:10:10.30:223,10,0	0/0:9,0:8:21.07:0,21,404	0/1:7,0:5:17.41:17,0,85	0/1:8,4:12:6.76:145,0,7	0/1:7,3:10:8.18:121,0,8	0/1:7,0:7:8.67:9,0,174	0/0:14,0:14:33.99:0,34,547	0/0:8,0:8:21.05:0,21,342	0/0:19,0:19:12.85:0,13,637	0/0:14,0:13:35.98:0,36,617	0/0:14,0:12:29.97:0,30,502	0/0:9,0:9:19.30:0,19,294	0/1:14,0:10:10.81:11,0,285	0/1:9,1:9:49.23:49,0,58	0/1:6,3:8:27.87:42,0,28	0/1:18,3:18:19.42:116,0,19	0/1:12,0:12:9.86:10,0,110	0/0:20,0:20:7.96:0,8,501	0/0:13,0:13:3.06:0,3,516	0/0:4,0:3:2.83:0,3,43
chr10	77300265	.	C	CA	705.91	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=7.989;DP=490;FS=0.601;HRun=3;HaplotypeScore=129.0394;InbreedingCoeff=0.8239;MQ=37.20;MQ0=43;MQRankSum=-5.629;QD=7.43;ReadPosRankSum=-0.384;VQSLOD=0.4881;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:81.25:0,81,999	0/0:5,0:5:11.87:0,12,115	0/0:80,0:14:36.05:0,36,408	0/0:94,0:21:57.09:0,57,643	1/1:13,1:13:11.16:90,11,0	0/0:14,0:14:29.88:0,30,328	0/0:14,0:12:18.09:0,18,194	0/0:12,0:9:26.45:0,26,299	1/1:7,2:9:19.91:174,20,0	0/0:8,0:7:21.07:0,21,259	0/0:8,0:6:6:0,6,70	1/1:8,4:12:22.76:209,23,0	1/1:6,2:8:14.21:87,14,0	0/0:6,0:6:14.62:0,15,138	0/0:15,0:15:29.74:0,30,310	0/0:7,0:7:20.57:0,21,210	0/0:19,0:19:36.20:0,36,390	0/0:14,0:13:36.71:0,37,404	0/0:13,0:11:29.58:0,30,333	0/0:9,0:9:14.24:0,14,153	0/0:13,0:9:19.43:0,19,205	1/1:9,3:11:6.68:60,7,0	1/1:4,5:8:18.31:110,18,0	1/1:16,4:18:17.19:123,17,0	0/1:10,0:10:7.50:44,0,8	0/0:15,0:14:28.65:0,29,342	0/0:14,0:14:35.70:0,36,375	0/0:4,0:3:1.37:0,1,20
chr10	77300267	.	AC	A	1121.73	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=7.497;DP=489;FS=0.552;HRun=1;HaplotypeScore=126.0003;InbreedingCoeff=0.9081;MQ=37.07;MQ0=46;MQRankSum=-6.062;QD=12.06;ReadPosRankSum=1.518;VQSLOD=2.2309;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:81.04:0,81,1275	0/0:5,0:5:12.04:0,12,156	0/0:77,0:12:23.38:0,23,479	0/0:94,0:21:57.40:0,57,793	1/1:2,12:13:36.12:488,36,0	0/0:13,0:13:30.10:0,30,453	0/0:14,0:11:22.25:0,22,285	0/0:13,0:10:25.20:0,25,389	1/1:9,0:9:23.49:167,23,0	0/0:8,0:7:21.07:0,21,334	0/0:8,0:7:5.93:0,6,60	1/1:10,0:10:23.15:133,23,0	1/1:8,0:8:15.12:78,15,0	0/0:6,0:6:14.81:0,15,177	0/0:16,0:16:30.36:0,30,408	0/0:8,0:8:20.90:0,21,288	0/0:19,1:18:34.23:0,34,531	0/0:14,0:13:34.11:0,34,514	0/0:13,0:11:30.09:0,30,437	0/0:9,0:9:15.05:0,15,205	0/0:14,0:10:19.63:0,20,250	1/1:11,1:11:19.43:87,19,0	1/1:10,0:8:13.03:66,13,0	1/1:19,2:18:18.89:88,19,0	1/1:3,6:9:7.85:214,8,0	0/0:14,0:13:31.35:0,31,472	0/0:15,0:15:35.92:0,36,475	0/0:5,0:4:0.84:0,1,35
chr10	77300268	.	CA	C	917.73	PASS	AB=0.936;AC=17;AF=0.304;AN=56;BaseQRankSum=6.267;DP=502;FS=1.857;HRun=2;HaplotypeScore=128.9317;InbreedingCoeff=0.3769;MQ=36.99;MQ0=48;MQRankSum=-4.586;QD=6.16;ReadPosRankSum=1.408;VQSLOD=0.8736;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:81.03:0,81,1133	0/0:5,0:5:11.91:0,12,100	0/0:77,0:12:34.92:0,35,415	0/0:94,0:21:54.54:0,55,643	1/1:17,0:16:25.58:246,26,0	0/0:13,0:13:30.01:0,30,354	0/1:16,0:13:9.22:9,0,178	0/0:13,0:10:8.67:0,9,294	1/1:9,1:10:19.70:125,20,0	0/0:8,0:7:21.07:0,21,277	0/0:8,0:7:3:0,3,29	1/1:8,2:10:23.70:228,24,0	1/1:6,2:8:14.66:117,15,0	0/0:7,0:7:8.34:0,8,123	0/0:16,0:16:27.47:0,27,306	0/0:8,0:8:18.02:0,18,220	0/0:22,0:20:29.75:0,30,380	0/0:13,0:12:32.85:0,33,435	0/0:13,0:11:16.34:0,16,357	0/0:10,0:9:4.13:0,4,123	0/1:14,1:10:1.87:2,0,155	0/1:9,5:13:16.13:66,0,16	1/1:9,1:8:8.97:99,9,0	0/1:18,3:18:24.84:93,0,25	0/1:9,0:9:14.89:87,0,15	0/1:14,0:13:9:9,0,362	0/0:16,0:15:13.12:0,13,359	0/1:5,0:4:14.97:15,0,15
chr10	77300269	.	A	AC	807.63	PASS	AB=0.970;AC=22;AF=0.393;AN=56;BaseQRankSum=5.201;DP=511;FS=2.646;HRun=1;HaplotypeScore=139.0679;InbreedingCoeff=0.0369;MQ=36.88;MQ0=48;MQRankSum=-4.003;QD=3.57;ReadPosRankSum=-0.444;VQSLOD=0.1043;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:81.10:0,81,1102	0/0:5,0:5:11.91:0,12,100	0/0:77,0:12:34.92:0,35,415	0/0:93,0:20:54.07:0,54,642	1/1:17,0:16:9.20:148,9,0	0/0:13,0:13:29.53:0,30,308	0/1:17,0:14:31.12:31,0,178	0/1:15,0:12:70.31:70,0,279	0/1:10,0:10:3.26:33,0,3	0/1:10,0:9:33.29:33,0,180	0/0:7,1:7:2.22:0,2,7	1/1:10,0:10:18.40:169,18,0	1/1:7,0:7:9.41:62,9,0	0/1:8,0:8:2.87:3,0,108	0/0:16,0:16:23.90:0,24,258	0/0:8,0:8:17.94:0,18,185	0/0:20,1:19:2.52:0,3,322	0/1:14,0:13:0.84:1,0,341	0/0:13,0:11:16.34:0,16,338	0/1:9,1:9:4.46:4,0,94	0/1:14,1:10:13.93:14,0,155	0/1:14,0:13:14.75:15,0,46	1/1:10,0:8:8.64:50,9,0	0/1:18,1:18:21.73:75,0,22	0/1:9,0:9:1.69:38,0,2	0/1:19,1:19:99:185,0,301	0/1:16,0:15:1.52:2,0,256	0/1:4,1:4:14.93:40,0,15
chr10	77300270	.	AC	A	419.36	PASS	AB=0.952;AC=14;AF=0.250;AN=56;BaseQRankSum=9.041;DP=513;FS=1.239;HRun=1;HaplotypeScore=131.0756;InbreedingCoeff=0.6428;MQ=37.09;MQ0=49;MQRankSum=-4.594;QD=4.32;ReadPosRankSum=4.079;VQSLOD=0.5390;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:31:59.02:0,59,1089	0/0:5,0:5:3.01:0,3,37	0/0:76,0:12:36.03:0,36,417	0/0:92,0:19:51.45:0,51,586	0/1:17,0:16:4.17:53,0,4	0/0:13,0:13:24.08:0,24,307	0/0:17,0:14:19.01:0,19,181	0/0:14,0:13:36.17:0,36,368	1/1:5,5:10:22.50:154,22,0	0/0:10,0:9:26.85:0,27,319	0/0:8,0:7:3.01:0,3,37	1/1:6,4:10:23.21:143,23,0	1/1:4,3:7:13.62:72,14,0	0/0:9,0:9:12.01:0,12,143	0/0:17,0:17:21.06:0,21,262	0/0:8,0:8:15.05:0,15,202	0/0:23,0:21:25.97:0,26,302	0/0:14,0:13:37.54:0,38,456	0/0:13,0:11:27.56:0,28,381	0/0:10,0:9:6.90:0,7,81	0/0:15,0:10:10.27:0,10,112	1/1:13,1:13:0.76:44,1,0	1/1:9,3:9:9.55:53,10,0	0/1:16,2:18:9.90:31,0,10	1/1:8,0:8:2.45:37,2,0	0/0:20,0:19:47.44:0,47,436	0/0:15,0:14:27.25:0,27,368	0/0:5,0:4:0.89:0,1,2
chr10	77300274	.	AC	A	208	PASS	AB=0.793;AC=9;AF=0.161;AN=56;BaseQRankSum=8.751;DP=539;FS=1.535;HRun=1;HaplotypeScore=130.8138;InbreedingCoeff=0.4859;MQ=37.31;MQ0=59;MQRankSum=-3.192;QD=2.89;ReadPosRankSum=2.950;VQSLOD=0.0808;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:85.51:0,86,1169	0/0:5,0:5:3.01:0,3,38	0/0:74,0:11:33.04:0,33,395	0/0:95,0:19:48.47:0,48,551	0/0:21,0:19:37.47:0,37,613	0/0:14,0:14:17.73:0,18,239	0/0:18,0:14:21.01:0,21,295	0/0:14,0:12:33.58:0,34,463	1/1:5,5:10:1.41:99,1,0	0/0:12,0:9:27.09:0,27,386	0/0:9,0:8:3.01:0,3,37	0/1:6,3:10:25.01:25,0,54	1/1:4,3:7:6.16:71,6,0	0/0:12,0:10:12.04:0,12,164	0/0:20,0:20:20.98:0,21,268	0/0:11,0:10:15.05:0,15,206	0/0:25,0:23:23.64:0,24,333	0/0:14,0:13:38.49:0,38,501	0/0:12,0:10:24.55:0,25,353	0/0:10,0:9:9.03:0,9,118	0/0:16,0:9:9.03:0,9,122	1/1:13,1:12:19.28:102,19,0	0/1:9,3:9:2:2,0,17	0/1:16,3:18:1.06:43,0,1	0/0:8,0:8:17.96:0,18,254	0/0:22,0:21:59.14:0,59,799	0/0:16,0:15:30.10:0,30,408	0/0:5,0:4:3.01:0,3,45
chr10	77300278	.	AC	A	756.85	PASS	AB=0.923;AC=10;AF=0.179;AN=56;BaseQRankSum=8.992;DP=551;FS=4.304;HRun=1;HaplotypeScore=127.5664;InbreedingCoeff=0.5632;MQ=36.44;MQ0=72;MQRankSum=-3.660;QD=9.96;ReadPosRankSum=3.217;VQSLOD=1.7863;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:86.33:0,86,1173	0/0:5,0:5:3.01:0,3,38	0/0:76,0:10:27.09:0,27,340	0/0:95,1:17:35.54:0,36,478	0/0:23,0:20:35.36:0,35,614	0/0:15,0:15:17.73:0,18,239	0/0:20,0:16:21.01:0,21,295	0/0:14,0:12:33.58:0,34,464	0/1:9,2:11:13.27:225,0,13	0/0:12,0:9:27.09:0,27,387	0/0:9,0:8:2.88:0,3,37	0/1:10,0:10:55.95:107,0,56	1/1:7,0:7:14.62:120,15,0	0/0:12,0:10:9.03:0,9,130	0/0:21,0:20:20.98:0,21,269	0/0:12,0:10:15.05:0,15,206	0/0:25,0:23:20.64:0,21,309	0/0:13,0:12:33.06:0,33,429	0/0:10,0:8:21.54:0,22,304	0/0:10,0:9:9.03:0,9,119	0/0:16,0:8:9.03:0,9,122	1/1:11,4:13:26:251,26,0	1/1:12,0:9:1.31:24,1,0	1/1:16,5:17:20.57:184,21,0	0/0:8,0:8:17.96:0,18,255	0/0:22,0:19:54.18:0,54,785	0/0:17,0:16:30.10:0,30,409	0/0:5,0:4:3.01:0,3,45
chr10	77300299	.	CACACACACACACAAAA	C	4778.57	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=2.275;DP=541;FS=17.429;HRun=0;HaplotypeScore=181.5374;InbreedingCoeff=0.8725;MQ=41.01;MQ0=87;MQRankSum=-0.704;QD=50.30;ReadPosRankSum=1.966;VQSLOD=3.5715;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:70.95:0,71,3586	./.	0/0:48,0:12:35.68:0,36,757	0/0:50,0:9:26.92:0,27,625	0/0:28,0:25:57.19:0,57,1879	0/0:16,0:16:7.27:0,7,249	0/0:21,0:16:18.52:0,19,639	0/0:15,0:12:11.24:0,11,566	1/1:13,1:14:28.54:1046,29,0	0/0:21,0:10:30.05:0,30,883	0/0:10,0:10:8.20:0,8,130	1/1:13,1:13:23.37:664,23,0	1/1:8,2:10:27.06:732,27,0	0/0:14,0:11:12:0,12,367	0/0:20,0:18:9.03:0,9,426	0/0:14,0:11:12.04:0,12,497	0/0:31,0:27:19:0,19,709	0/0:12,0:10:23.11:0,23,901	0/0:10,0:8:14.46:0,14,601	0/0:11,0:10:11.78:0,12,359	0/0:24,0:12:6.02:0,6,229	1/1:14,3:14:32.70:950,33,0	1/1:18,0:15:33.11:691,33,0	1/1:21,1:19:30.24:694,30,0	0/0:10,0:8:24.08:0,24,713	0/0:29,0:22:51.25:0,51,1831	0/0:17,0:15:21.07:0,21,857	0/0:13,0:8:3.01:0,3,127
chr10	77300307	.	CACACAAAA	C	3600.16	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=1.676;DP=512;FS=10.154;HRun=0;HaplotypeScore=136.0831;InbreedingCoeff=0.8051;MQ=44.88;MQ0=82;MQRankSum=0.605;QD=42.35;ReadPosRankSum=2.854;VQSLOD=3.0700;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:73.49:0,73,2117	./.	0/0:35,0:12:29.15:0,29,548	0/0:36,0:9:26.91:0,27,430	0/0:28,0:24:57.02:0,57,1229	0/0:15,0:15:7.27:0,7,88	0/0:20,0:14:15.49:0,15,228	0/0:13,0:10:1.88:0,2,228	1/1:8,5:13:39.13:748,39,0	0/0:21,0:10:7.57:0,8,287	0/0:11,0:11:8.20:0,8,62	1/1:10,2:12:31.66:551,32,0	1/1:8,3:11:33.06:573,33,0	0/0:14,0:11:11.02:0,11,149	0/0:23,0:20:9:0,9,139	0/0:14,0:10:8.98:0,9,198	0/0:32,0:28:18.49:0,18,307	0/0:12,0:10:18.40:0,18,371	0/0:11,0:9:10.90:0,11,270	0/0:11,0:10:11.65:0,12,84	0/0:25,0:13:3.01:0,3,54	1/1:14,1:12:36.11:618,36,0	1/1:10,3:12:36.12:585,36,0	1/1:18,2:17:31.38:525,31,0	0/0:12,0:8:19.85:0,20,428	0/0:31,0:24:30.89:0,31,680	0/0:16,0:14:18.06:0,18,355	0/0:13,0:9:3.01:0,3,41
chr10	77300312	.	A	ACACAC	2377.27	PASS	AC=32;AF=0.593;AN=54;BaseQRankSum=-3.093;DP=467;FS=11.982;HRun=0;HaplotypeScore=113.3772;InbreedingCoeff=0.7322;MQ=49.57;MQ0=83;MQRankSum=1.848;QD=9.74;ReadPosRankSum=-0.590;VQSLOD=1.6664;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:72.53:0,73,1131	./.	0/0:30,0:11:31.18:0,31,314	0/0:29,0:9:21.49:0,21,214	0/0:30,0:27:43.46:0,43,494	1/1:1,11:16:5.32:141,5,0	1/1:5,0:10:6.49:105,6,0	1/1:10,0:8:14.88:142,15,0	0/0:13,0:13:24.53:0,25,250	1/1:13,0:8:23.75:268,24,0	1/1:2,0:11:2.51:67,3,0	0/0:14,0:13:6.63:0,7,117	0/0:12,0:12:14.46:0,14,119	1/1:5,0:10:3.01:51,3,0	1/1:2,11:14:6.02:134,6,0	1/1:2,0:10:5:50,5,0	1/1:6,17:23:9.03:187,9,0	1/1:1,1:6:7.84:153,8,0	1/1:5,0:4:5.85:36,6,0	1/1:2,4:6:6.02:139,6,0	1/1:10,0:13:3.01:64,3,0	0/0:17,0:14:25.20:0,25,239	0/0:15,0:14:2.89:0,3,48	0/0:20,0:17:11.79:0,12,133	0/0:12,0:7:17.94:0,18,182	1/1:10,0:20:41.89:545,42,0	1/1:2,10:13:15.05:404,15,0	1/1:4,0:8:3.01:87,3,0
chr10	77300501	.	GAA	G	6226.49	PASS	AB=0.582;AC=34;AF=0.607;AN=56;BaseQRankSum=-7.316;DP=598;FS=1.222;HRun=12;HaplotypeScore=87.1425;InbreedingCoeff=0.8569;MQ=61.55;MQ0=19;MQRankSum=-1.093;QD=17.20;ReadPosRankSum=5.103;VQSLOD=4.0518;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:40:92.71:0,93,1244	1/1:3,7:11:23.78:225,24,0	0/0:41,0:15:22.71:0,23,293	0/0:27,0:12:9.68:0,10,113	0/0:14,0:13:30.06:0,30,421	1/1:1,14:14:33.07:334,33,0	1/1:2,19:21:33.07:336,33,0	1/1:4,15:17:36.04:346,36,0	0/1:3,1:15:2.63:3,0,60	1/1:4,18:20:41.72:451,42,0	1/1:4,14:17:30.01:303,30,0	0/0:4,0:15:27.95:0,28,113	0/0:3,0:21:40.44:0,40,176	1/1:2,15:17:24.04:244,24,0	1/1:4,23:26:42.07:427,42,0	1/1:0,15:16:26.76:327,27,0	1/1:5,33:40:72.68:792,73,0	1/1:5,15:19:3.45:413,3,0	1/1:2,7:9:21.03:213,21,0	1/1:1,14:15:36:350,36,0	1/1:5,19:23:36.06:366,36,0	0/0:2,0:13:22.46:0,22,79	0/0:1,0:19:42.42:0,42,149	0/0:6,0:26:44.92:0,45,158	0/0:18,0:17:42.03:0,42,508	1/1:6,27:32:51.68:699,52,0	1/1:4,21:25:33:335,33,0	0/1:5,8:12:6.96:61,0,7
chr10	77301068	.	AT	A	968.99	PASS	AB=0.889;AC=16;AF=0.286;AN=56;BaseQRankSum=-3.925;DP=513;FS=0.000;HRun=13;HaplotypeScore=94.3225;InbreedingCoeff=0.5946;MQ=54.73;MQ0=5;MQRankSum=1.798;QD=5.38;ReadPosRankSum=1.453;VQSLOD=2.4780;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,1:39:23.35:0,23,489	0/0:6,0:7:8.85:0,9,72	0/0:9,0:7:6.47:0,6,78	0/0:4,0:2:3:0,3,25	0/0:22,0:22:30.91:0,31,153	0/0:19,2:20:17.16:0,17,324	0/0:7,0:7:12.02:0,12,117	0/0:28,1:31:3.87:0,4,318	1/1:4,8:13:8.91:66,9,0	0/1:16,3:18:10.76:11,0,228	0/1:14,2:18:2.45:2,0,258	1/1:0,17:17:29.83:219,30,0	1/1:13,6:19:16.13:113,16,0	0/0:14,0:14:27.80:0,28,230	0/0:21,0:22:44.84:0,45,402	0/0:20,0:20:45.96:0,46,438	0/0:20,0:19:30:0,30,280	0/0:14,0:14:29.66:0,30,252	0/0:27,1:28:13.32:0,13,457	0/0:20,0:22:55.56:0,56,429	0/0:12,0:11:5.10:0,5,175	1/1:5,22:26:43.85:310,44,0	1/1:6,9:16:19.82:132,20,0	1/1:4,20:24:38.75:284,39,0	0/0:15,0:15:37.88:0,38,164	0/1:17,2:18:5.02:5,0,263	0/0:19,1:20:14.58:0,15,289	0/1:7,1:8:9.89:10,0,76
chr10	77301070	.	T	TA	977.61	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.545;DP=518;FS=0.000;HRun=0;HaplotypeScore=100.4269;InbreedingCoeff=0.8913;MQ=53.98;MQ0=8;MQRankSum=-2.570;QD=23.28;ReadPosRankSum=0.175;VQSLOD=4.4882;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:39:93.09:0,93,949	0/0:8,0:7:17.59:0,18,177	0/0:9,0:7:17.48:0,17,182	0/0:4,0:2:5.83:0,6,38	1/1:8,17:24:50.35:578,50,0	0/0:20,0:19:54:0,54,614	0/0:7,0:7:21:0,21,238	0/0:28,0:28:65.02:0,65,787	0/0:13,0:13:11.98:0,12,98	0/0:19,0:18:47.88:0,48,555	0/0:18,0:18:31.37:0,31,460	0/0:18,0:18:29.43:0,29,223	0/0:20,0:19:44.34:0,44,342	0/0:14,0:14:33.03:0,33,376	0/0:21,0:21:42.92:0,43,574	0/0:20,0:20:51.12:0,51,660	0/0:22,0:19:45.01:0,45,512	0/0:15,0:14:25.10:0,25,332	0/0:28,0:28:72.76:0,73,866	0/0:23,0:23:46.51:0,47,611	0/0:12,0:11:26.94:0,27,306	0/0:28,0:27:56.26:0,56,422	0/0:17,0:17:9.94:0,10,248	0/0:25,0:25:40.65:0,41,303	1/1:4,12:16:31.01:521,31,0	0/0:20,0:19:54.10:0,54,635	0/0:20,0:20:56.86:0,57,609	0/0:6,0:6:14.39:0,14,155
chr10	77301086	.	CT	C	5007.17	PASS	AB=0.767;AC=38;AF=0.704;AN=54;BaseQRankSum=5.495;DP=487;FS=1.566;HRun=10;HaplotypeScore=79.3091;InbreedingCoeff=0.7525;MQ=47.96;MQ0=18;MQRankSum=-0.571;QD=15.04;ReadPosRankSum=2.890;VQSLOD=5.4184;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,3:34:11.10:0,11,533	1/1:1,5:5:11.99:104,12,0	0/1:6,0:5:12.61:13,0,78	./.	1/1:8,16:23:29.97:259,30,0	1/1:5,11:15:29.99:260,30,0	1/1:2,4:5:11.99:104,12,0	1/1:9,13:20:38.98:338,39,0	0/0:16,0:16:21:0,21,204	1/1:6,12:16:32.83:286,33,0	1/1:9,11:19:29.98:260,30,0	0/0:15,1:16:1.02:0,1,229	0/0:17,0:15:31.32:0,31,335	1/1:4,8:12:17.89:144,18,0	1/1:3,22:25:50.96:441,51,0	1/1:3,15:18:41.77:359,42,0	1/1:7,13:18:35:292,35,0	1/1:5,10:12:23.98:208,24,0	1/1:13,13:26:7.36:316,7,0	1/1:5,18:23:44.55:390,45,0	1/1:6,8:11:20.99:182,21,0	0/0:27,0:26:45.59:0,46,499	0/0:15,0:15:22.29:0,22,228	0/0:25,0:25:35.31:0,35,425	1/1:4,13:17:35.99:312,36,0	1/1:4,11:14:32.94:286,33,0	1/1:7,14:21:41.98:364,42,0	0/1:1,7:8:18.18:89,0,18
chr10	77301826	.	CCTGTCTCTCT	C	4244.45	PASS	AB=0.871;AC=29;AF=0.518;AN=56;BaseQRankSum=-1.226;DP=436;FS=7.044;HRun=0;HaplotypeScore=123.4626;InbreedingCoeff=0.5010;MQ=57.74;MQ0=19;MQRankSum=-1.167;QD=16.32;ReadPosRankSum=-0.284;VQSLOD=3.3352;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:40.96:0,41,1208	0/1:4,0:6:7.11:105,0,7	0/1:29,0:15:4.04:4,0,206	0/0:37,0:18:17.34:0,17,259	0/0:16,0:16:34.95:0,35,270	1/1:15,0:15:20.84:243,21,0	1/1:13,0:13:17.94:144,18,0	1/1:30,0:27:48.40:610,48,0	0/1:22,0:20:26.64:27,0,827	1/1:12,0:13:38.76:331,39,0	0/0:1,13:14:2:0,2,7	0/0:10,0:10:27.01:0,27,552	0/0:11,0:11:29.87:0,30,588	0/1:8,0:8:99:119,0,118	1/1:11,0:11:26.97:257,27,0	1/1:13,0:12:29.96:284,30,0	1/1:14,0:12:26.93:291,27,0	0/1:9,0:8:23.74:115,0,24	0/1:2,0:16:99:365,0,243	1/1:8,0:10:21.45:176,21,0	1/1:15,0:13:23.91:224,24,0	0/0:14,0:14:29.86:0,30,457	0/0:16,0:15:36.02:0,36,1155	0/0:15,0:13:33.08:0,33,1141	0/0:14,0:14:30.16:0,30,482	0/1:10,1:10:85.35:380,0,85	1/1:11,1:12:29.54:366,30,0	1/1:10,0:7:20.93:205,21,0
chr10	77301872	.	TCACACACACA	T	1608.13	PASS	AB=0.940;AC=16;AF=0.364;AN=44;BaseQRankSum=1.232;DP=381;FS=23.901;HRun=0;HaplotypeScore=115.7579;InbreedingCoeff=0.0440;MQ=39.23;MQ0=51;MQRankSum=-1.121;QD=9.57;ReadPosRankSum=-0.750;VQSLOD=0.4301;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:28:14.81:0,15,453	1/1:3,0:4:3.01:85,3,0	./.	./.	./.	1/1:8,1:16:9.03:238,9,0	0/0:8,3:11:0.94:0,1,1	./.	0/1:20,0:18:25.90:26,0,56	0/1:10,1:13:1.88:331,0,2	0/0:16,1:17:0.94:0,1,2	0/0:10,0:8:0:0,0,0	0/1:9,0:9:4.63:43,0,5	0/1:11,1:12:42.91:154,0,43	0/0:8,1:10:0.47:0,0,1	1/1:11,9:20:5.47:171,5,0	./.	0/0:13,0:8:5.82:0,6,33	0/0:7,0:6:2.22:0,2,7	0/0:10,0:15:3.87:0,4,24	./.	0/1:13,0:13:14.75:38,0,15	0/0:19,0:20:0.62:0,1,1	0/1:20,0:14:43.46:43,0,52	0/0:10,0:9:0.94:0,1,2	0/1:10,1:9:79.15:322,0,79	1/1:9,6:16:8.04:228,8,0	0/1:7,0:5:1.01:47,0,1
chr10	77302858	.	GA	G	5453.88	PASS	AB=0.600;AC=49;AF=0.875;AN=56;BaseQRankSum=3.555;DP=442;FS=2.151;HRun=13;HaplotypeScore=56.2406;InbreedingCoeff=0.6702;MQ=72.18;MQ0=0;MQRankSum=-1.903;QD=13.98;ReadPosRankSum=2.071;VQSLOD=5.5738;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,1:25:50:0,50,622	1/1:1,5:6:14.91:109,15,0	0/0:14,0:11:12.40:0,12,121	0/0:12,1:12:0.11:0,0,53	1/1:4,0:26:36.65:108,37,0	1/1:2,13:15:35.79:263,36,0	1/1:1,7:9:22.92:159,23,0	1/1:2,19:23:55.62:395,56,0	1/1:3,6:10:13.92:93,14,0	1/1:11,18:29:30.42:386,30,0	1/1:7,14:20:22.26:265,22,0	1/1:4,17:21:41.72:307,42,0	1/1:5,9:14:20.84:153,21,0	1/1:3,12:15:29.77:219,30,0	1/1:3,5:8:17.87:128,18,0	1/1:2,5:7:14.90:109,15,0	1/1:2,20:24:8.38:369,8,0	1/1:1,17:19:52.72:378,53,0	0/1:7,13:21:17.64:206,0,18	1/1:5,15:20:41.72:306,42,0	1/1:0,12:12:35.80:263,36,0	1/1:0,12:12:26.82:197,27,0	1/1:4,9:14:28.85:203,29,0	1/1:0,8:9:22.92:159,23,0	1/1:0,0:13:14.26:42,14,0	1/1:4,15:19:38.69:284,39,0	1/1:3,10:15:7.71:201,8,0	1/1:1,7:8:20.85:151,21,0
chr10	77302985	.	G	GA	6006.14	PASS	AB=0.836;AC=35;AF=0.625;AN=56;BaseQRankSum=-9.399;DP=457;FS=3.102;HRun=10;HaplotypeScore=50.4690;InbreedingCoeff=0.7440;MQ=75.20;MQ0=1;MQRankSum=-0.490;QD=19.76;ReadPosRankSum=-0.610;VQSLOD=5.4435;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:59.92:0,60,492	1/1:0,3:3:9.02:96,9,0	0/0:20,0:19:34.25:0,34,238	0/1:13,0:9:30.72:31,0,39	0/0:17,0:17:29.94:0,30,246	1/1:3,12:15:27.06:281,27,0	1/1:3,9:12:27.07:288,27,0	0/1:7,14:21:4.36:345,0,4	0/0:11,0:11:26.97:0,27,222	1/1:5,11:16:37.34:385,37,0	1/1:5,10:15:27.07:285,27,0	0/1:8,1:10:12.05:12,0,150	0/0:14,0:15:22.99:0,23,178	1/1:2,9:11:33.07:344,33,0	1/1:3,9:12:27.07:288,27,0	1/1:3,8:11:18.05:192,18,0	1/1:2,27:30:62.32:698,62,0	1/1:7,15:21:48.10:503,48,0	1/1:7,12:21:41.76:405,42,0	1/1:2,14:16:20.47:423,20,0	1/1:6,12:19:29.91:302,30,0	0/0:6,0:6:5.98:0,6,49	0/0:13,0:13:29.94:0,30,246	0/0:27,1:28:42.92:0,43,552	0/0:19,0:19:44.93:0,45,369	1/1:7,16:23:26.48:487,26,0	1/1:7,22:28:34.81:609,35,0	1/1:0,5:5:3.01:32,3,0
chr10	77303104	.	CA	C	653.88	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.895;DP=442;FS=4.806;HRun=7;HaplotypeScore=51.4864;InbreedingCoeff=0.9271;MQ=63.13;MQ0=10;MQRankSum=0.066;QD=18.16;ReadPosRankSum=-1.857;VQSLOD=2.9522;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:51.12:0,51,623	0/0:7,0:7:15.05:0,15,188	0/0:21,0:13:15.69:0,16,213	0/0:17,0:10:12.42:0,12,102	1/1:0,16:16:39.04:386,39,0	0/0:10,0:10:15.05:0,15,185	0/0:18,0:18:51.15:0,51,623	0/0:18,0:15:42.13:0,42,521	0/0:13,0:12:27.09:0,27,336	0/0:16,0:14:36.10:0,36,430	0/0:19,0:16:39.06:0,39,444	0/0:9,0:9:20.87:0,21,264	0/0:13,0:13:30.04:0,30,345	0/0:12,0:11:27.08:0,27,328	0/0:9,0:8:24.08:0,24,298	0/0:13,0:12:30.08:0,30,364	0/0:30,0:30:74.57:0,75,885	0/0:14,0:14:27.09:0,27,339	0/0:20,0:19:45.57:0,46,570	0/0:17,0:17:41.85:0,42,517	0/0:17,0:14:42.13:0,42,528	0/0:17,0:16:42.13:0,42,527	0/0:9,0:9:18.06:0,18,221	0/0:25,0:25:45.13:0,45,554	1/1:4,16:20:39.07:389,39,0	0/0:16,0:15:39.09:0,39,460	0/0:19,0:19:51.11:0,51,600	0/0:3,0:3:9.03:0,9,113
chr10	77303201	.	G	GAA	1765.55	PASS	AB=0.919;AC=35;AF=0.625;AN=56;BaseQRankSum=1.667;DP=421;FS=4.737;HRun=16;HaplotypeScore=89.2845;InbreedingCoeff=0.1349;MQ=39.15;MQ0=34;MQRankSum=-3.272;QD=5.13;ReadPosRankSum=-3.164;VQSLOD=-0.5294;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:27.75:0,28,210	1/1:5,1:7:6.01:64,6,0	0/0:2,0:1:0.89:0,1,2	0/1:4,0:1:0:0,0,0	0/1:26,0:25:4.79:5,0,34	0/1:7,0:5:16.39:24,0,16	0/1:10,7:14:5.17:120,0,5	1/1:16,0:9:3.21:57,3,0	0/0:14,0:15:2.24:0,2,40	1/1:13,0:14:11.24:82,11,0	0/1:19,0:17:0.76:101,0,1	0/1:7,0:8:5.27:18,0,5	0/0:14,0:13:8.26:0,8,44	1/1:5,1:6:13.59:85,14,0	0/1:12,4:15:2.29:144,0,2	1/1:13,2:13:4.14:235,4,0	0/1:15,1:14:25.70:77,0,26	0/1:15,2:14:10.19:165,0,10	0/1:16,0:10:7.45:71,0,7	1/1:11,4:15:20.21:154,20,0	1/1:13,0:8:5.95:55,6,0	0/1:10,0:11:0.06:0,0,10	1/1:12,0:14:1.01:13,1,0	1/1:9,0:12:3.45:45,3,0	0/0:10,0:10:5.47:0,5,34	1/1:17,0:17:17.30:135,17,0	1/1:25,2:26:4.07:186,4,0	1/1:9,1:10:9.12:81,9,0
chr10	77303209	.	AAAAAAAAAGAAAAGAAAAAAG	A	1100.90	PASS	AB=0.855;AC=11;AF=0.196;AN=56;BaseQRankSum=-1.389;DP=387;FS=21.110;HRun=0;HaplotypeScore=174.0837;InbreedingCoeff=0.5170;MQ=35.89;MQ0=31;MQRankSum=-3.697;QD=14.11;ReadPosRankSum=3.205;VQSLOD=1.0560;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:30:69.19:0,69,4837	0/0:6,0:6:15.02:0,15,844	0/0:4,0:3:9.03:0,9,649	0/0:9,0:2:6.02:0,6,214	0/0:27,0:25:50.67:0,51,2114	0/0:9,0:7:9.03:0,9,511	0/0:15,0:13:20.83:0,21,403	0/0:24,0:13:13.68:0,14,801	1/1:12,1:12:0.02:485,0,0	0/0:11,0:11:28.59:0,29,1294	0/0:15,0:12:5.28:0,5,1083	1/1:9,0:8:8.52:101,9,0	0/1:3,10:12:99:310,0,159	0/0:7,0:6:15.05:0,15,828	0/0:17,0:14:30.10:0,30,1780	0/0:13,0:11:33.11:0,33,2020	0/0:16,0:13:36.16:0,36,2051	0/1:18,0:14:1.06:1,0,1421	0/0:17,0:12:31.02:0,31,1152	0/0:15,0:14:27.07:0,27,1520	0/0:10,0:8:10.86:0,11,571	0/1:7,0:7:7.08:7,0,7	1/1:8,0:8:4.21:37,4,0	1/1:9,1:9:15.07:301,15,0	0/0:9,0:8:15.05:0,15,873	0/0:19,0:17:40:0,40,1444	0/0:24,0:21:47.93:0,48,2433	0/0:9,0:8:12.93:0,13,718
chr10	77304611	.	GGTGTGTGTGT	G	3620.48	PASS	AB=0.852;AC=34;AF=0.630;AN=54;BaseQRankSum=7.356;DP=553;FS=49.981;HRun=0;HaplotypeScore=167.7071;InbreedingCoeff=0.1238;MQ=57.46;MQ0=3;MQRankSum=-5.861;QD=8.79;ReadPosRankSum=0.300;VQSLOD=1.2023;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:51.17:0,51,1813	1/1:6,4:11:9.03:248,9,0	./.	0/0:21,0:15:3.01:0,3,41	0/0:14,0:15:15.05:0,15,624	1/1:12,5:17:9.03:248,9,0	1/1:12,3:16:8.09:246,8,0	1/1:23,0:23:3.26:13,3,0	0/1:11,1:13:18.85:110,0,19	0/1:18,3:23:31.99:389,0,32	1/1:18,1:19:3:89,3,0	0/1:13,0:15:18.85:24,0,19	0/1:9,0:12:11.92:79,0,12	1/1:12,3:15:3:89,3,0	0/1:13,6:19:30.89:372,0,31	1/1:23,4:27:18.06:434,18,0	1/1:18,2:20:5.34:177,5,0	0/0:15,0:15:3.01:0,3,81	0/0:18,0:18:3.85:0,4,11	1/1:16,0:19:11.94:216,12,0	1/1:39,0:43:6.89:66,7,0	0/1:21,4:24:52.21:248,0,52	1/1:9,0:12:2.68:51,3,0	0/1:17,0:18:20.82:21,0,62	0/0:14,0:14:21.07:0,21,783	1/1:28,2:31:7.32:245,7,0	1/1:18,0:21:9.03:190,9,0	0/1:10,0:11:63.75:64,0,82
chr10	77304754	.	C	CAA	2131.75	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=0.822;DP=628;FS=2.623;HRun=13;HaplotypeScore=96.7048;InbreedingCoeff=0.8722;MQ=64.73;MQ0=0;MQRankSum=-0.088;QD=11.98;ReadPosRankSum=-4.975;VQSLOD=1.6151;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:35:36.69:0,37,492	0/0:7,0:9:26.48:0,26,208	0/0:11,0:10:20.12:0,20,141	0/0:17,0:13:11.80:0,12,132	1/1:4,13:19:44.85:466,45,0	0/0:16,0:18:20.74:0,21,228	0/0:24,0:29:17.01:0,17,373	0/0:28,0:32:67.18:0,67,594	1/1:2,14:18:11.52:119,12,0	0/0:17,0:18:26.66:0,27,245	0/0:20,0:22:47.53:0,48,400	1/1:4,6:10:9.03:114,9,0	1/1:5,16:23:17.03:180,17,0	0/1:18,0:18:4.46:4,0,137	0/0:21,0:24:40.93:0,41,325	0/0:35,0:37:80.04:0,80,683	0/0:26,0:27:56.45:0,56,487	0/0:18,0:19:26.37:0,26,223	0/0:17,0:19:29.32:0,29,233	0/0:31,0:37:10.48:0,10,347	0/0:25,0:28:53.07:0,53,490	1/1:3,23:28:62.53:743,63,0	1/1:5,11:18:23.91:254,24,0	1/1:6,14:23:18:198,18,0	1/1:4,12:21:23.05:254,23,0	0/0:25,0:30:20.53:0,21,359	0/0:21,0:22:32.53:0,33,297	0/0:12,0:12:2.50:0,3,187
chr10	77305244	.	GA	G	2821.57	PASS	AB=0.687;AC=28;AF=0.519;AN=54;BaseQRankSum=-5.372;DP=479;FS=3.818;HRun=11;HaplotypeScore=84.1671;InbreedingCoeff=0.6596;MQ=59.56;MQ0=31;MQRankSum=-2.879;QD=11.42;ReadPosRankSum=6.878;VQSLOD=3.2010;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,1:23:23.42:0,23,435	1/1:2,1:4:8.03:55,8,0	0/0:42,0:13:25.12:0,25,186	0/0:36,1:9:16.80:0,17,105	0/0:22,0:27:32.62:0,33,197	0/1:5,11:15:22:260,0,22	1/1:6,3:6:14.98:123,15,0	0/1:8,4:8:19.88:62,0,20	0/0:14,0:17:34.77:0,35,195	1/1:13,11:23:44.90:368,45,0	1/1:11,8:19:20.69:172,21,0	0/0:11,0:10:5.81:0,6,34	0/0:6,0:8:8.66:0,9,49	0/1:6,4:10:4.05:62,0,4	1/1:6,7:12:17.97:148,18,0	1/1:13,8:18:29.92:248,30,0	1/1:11,10:20:20.66:288,21,0	1/1:12,1:12:5.93:49,6,0	1/1:6,6:7:11.97:97,12,0	0/1:15,12:26:13.05:318,0,13	./.	0/0:4,0:8:20.17:0,20,116	0/0:11,0:18:26.88:0,27,138	0/0:13,0:12:10.20:0,10,60	0/0:15,0:19:28.21:0,28,183	1/1:10,12:22:47.83:394,48,0	1/1:10,6:15:26.96:222,27,0	1/1:4,3:7:20.82:162,21,0
chr10	77305255	.	AGTT	A	86.97	PASS	AB=0.982;AC=10;AF=0.179;AN=56;BaseQRankSum=-0.597;DP=518;FS=22.696;HRun=0;HaplotypeScore=111.1301;InbreedingCoeff=-0.0624;MQ=60.83;MQ0=22;MQRankSum=-1.553;QD=0.55;ReadPosRankSum=-3.290;VQSLOD=-0.0708;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:31.39:0,31,976	0/0:4,0:4:11.05:0,11,96	0/0:55,0:19:24.26:0,24,368	0/1:48,0:13:39.02:39,0,177	0/0:22,1:22:28.41:0,28,382	0/0:18,0:17:5.01:0,5,325	0/0:9,0:7:13.18:0,13,97	0/0:18,1:16:5.99:0,6,330	0/1:15,0:15:46.07:46,0,179	0/1:25,1:25:2.01:2,0,480	0/0:18,0:17:33.85:0,34,256	0/0:10,0:8:5.82:0,6,54	0/1:9,0:8:11.31:11,0,50	0/0:10,0:10:10.45:0,10,158	0/0:16,0:15:5.41:0,5,143	0/0:14,1:14:22.81:0,23,189	0/0:23,0:21:37.38:0,37,252	0/0:16,0:15:30.44:0,30,273	0/1:20,0:16:5.56:6,0,235	0/0:24,0:23:34.07:0,34,421	1/1:1,0:1:2.90:16,3,0	0/0:7,0:7:13.80:0,14,63	0/1:18,0:16:45.98:46,0,131	0/1:10,0:9:28.17:28,0,47	0/0:24,0:23:48.11:0,48,441	0/0:33,0:32:59.93:0,60,626	0/0:12,0:12:21.93:0,22,262	0/1:9,1:10:24.99:25,0,225
chr10	77305258	.	TAA	T	3865.87	PASS	AB=0.832;AC=37;AF=0.661;AN=56;BaseQRankSum=-3.189;DP=522;FS=3.011;HRun=15;HaplotypeScore=93.3857;InbreedingCoeff=0.6605;MQ=61.81;MQ0=23;MQRankSum=-4.246;QD=10.86;ReadPosRankSum=2.238;VQSLOD=3.0033;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:35.14:0,35,456	1/1:2,2:4:5.97:53,6,0	0/0:62,0:22:18.46:0,18,183	0/1:51,0:14:15.75:16,0,39	0/0:21,0:24:23.66:0,24,196	1/1:7,10:17:36.42:294,36,0	1/1:4,5:7:11.94:103,12,0	1/1:3,17:18:32.77:325,33,0	0/0:8,0:12:26.51:0,27,125	1/1:11,13:25:28.58:306,29,0	1/1:8,10:18:31.13:267,31,0	0/0:2,0:8:2.50:0,2,9	0/0:5,0:7:3.38:0,3,11	1/1:4,6:11:6.20:120,6,0	1/1:5,11:16:23.72:197,24,0	1/1:7,7:13:17.73:221,18,0	1/1:7,12:20:24.26:355,24,0	1/1:2,14:15:29.98:264,30,0	1/1:9,9:17:27.82:231,28,0	1/1:8,13:24:33.56:303,34,0	1/1:1,1:1:3:26,3,0	0/0:3,0:6:7.36:0,7,26	0/1:13,0:16:2.51:3,0,35	0/1:6,1:9:14.75:15,0,18	0/0:15,0:22:39.33:0,39,209	1/1:10,21:32:65.48:557,65,0	1/1:8,5:13:14.61:112,15,0	1/1:7,3:10:11.89:99,12,0
chr10	77305351	.	G	GGAAA	2043.72	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=-1.819;DP=503;FS=4.742;HRun=0;HaplotypeScore=133.7116;InbreedingCoeff=0.6432;MQ=53.06;MQ0=6;MQRankSum=0.818;QD=12.62;ReadPosRankSum=5.841;VQSLOD=2.5297;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:59.46:0,59,949	0/0:6,0:6:11.97:0,12,97	0/0:10,0:2:2.72:0,3,21	./.	0/0:27,0:25:27.74:0,28,605	0/0:18,0:17:19.13:0,19,240	0/0:26,0:24:48.92:0,49,361	0/0:26,0:20:41.06:0,41,276	1/1:1,20:22:24.08:646,24,0	0/0:32,0:32:64.49:0,64,610	0/0:21,0:21:36.32:0,36,300	1/1:1,20:21:8.05:317,8,0	1/1:0,9:9:9.03:241,9,0	0/1:11,0:11:7.37:7,0,109	0/0:15,0:15:22.14:0,22,181	0/0:22,0:21:36.80:0,37,292	0/0:25,0:24:59.85:0,60,434	0/0:13,0:13:12.68:0,13,179	0/0:19,0:15:41.73:0,42,331	0/0:22,0:22:39.02:0,39,308	0/0:8,0:8:13.11:0,13,93	1/1:1,20:21:35.76:485,36,0	1/1:0,17:19:5.95:162,6,0	1/1:0,14:14:12.04:323,12,0	0/1:27,0:27:29.65:30,0,467	0/1:18,0:18:9.34:9,0,175	0/0:19,0:19:40.65:0,41,295	0/0:5,0:5:11.91:0,12,87
chr10	77305359	.	A	AGAAG	3485.47	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=1.229;DP=526;FS=13.455;HRun=0;HaplotypeScore=125.6676;InbreedingCoeff=0.3125;MQ=53.06;MQ0=6;MQRankSum=0.831;QD=7.03;ReadPosRankSum=1.095;VQSLOD=2.0289;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:48.07:0,48,651	1/1:7,0:7:3:25,3,0	0/1:12,0:4:3.08:3,0,29	0/0:7,0:3:6.01:0,6,61	1/1:11,12:22:39.06:725,39,0	1/1:21,0:20:3.87:19,4,0	1/1:27,0:24:5.39:48,5,0	1/1:30,0:24:0.11:49,0,0	1/1:26,0:26:39.06:560,39,0	0/1:33,0:33:0.17:0,0,10	1/1:22,0:22:12.49:93,12,0	1/1:19,0:19:12.04:217,12,0	1/1:11,0:11:9.03:164,9,0	1/1:9,0:9:2.88:66,3,0	0/1:13,0:13:1.22:17,0,1	1/1:21,0:20:11.86:80,12,0	1/1:24,0:23:5.10:12,5,0	1/1:15,0:15:3.88:27,4,0	1/1:20,0:18:3.85:22,4,0	0/1:23,0:23:9.26:38,0,9	1/1:10,0:10:6.89:46,7,0	1/1:19,0:19:17.43:262,17,0	1/1:18,0:18:5.95:110,6,0	1/1:13,0:13:16.59:255,17,0	1/1:9,19:29:18.06:434,18,0	1/1:25,0:25:25.27:191,25,0	1/1:19,0:19:1.85:18,2,0	1/1:6,0:6:0.47:1,0,0
chr10	77306340	.	C	CA	2492.72	PASS	AB=0.813;AC=36;AF=0.643;AN=56;BaseQRankSum=1.663;DP=556;FS=3.858;HRun=15;HaplotypeScore=93.1708;InbreedingCoeff=0.2057;MQ=65.35;MQ0=2;MQRankSum=-1.411;QD=5.38;ReadPosRankSum=-3.606;VQSLOD=1.8247;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:28:42.42:0,42,232	1/1:2,5:7:9.36:63,9,0	0/1:14,1:11:28.94:29,0,36	0/0:10,0:7:5.56:0,6,48	1/1:28,0:27:44.92:231,45,0	1/1:17,6:24:7.13:239,7,0	0/1:9,12:21:15.08:99,0,15	0/1:19,1:20:3.03:62,0,3	0/1:22,1:24:4.78:5,0,89	1/1:13,13:27:8.21:181,8,0	1/1:5,10:15:24.79:153,25,0	0/0:19,0:22:27.51:0,28,145	0/1:20,0:21:11.72:12,0,18	1/1:16,2:18:37.13:266,37,0	0/1:5,3:11:21.17:50,0,21	1/1:9,11:20:1.21:110,1,0	0/1:3,20:23:35.97:58,0,36	1/1:17,4:22:34.84:269,35,0	0/1:18,10:29:0.44:181,0,0	1/1:9,9:18:16.50:166,16,0	1/1:6,9:15:6.88:52,7,0	0/0:15,0:15:17.23:0,17,103	0/1:17,0:20:15.47:15,0,86	0/0:17,0:17:23.12:0,23,143	1/1:13,0:13:17.71:93,18,0	1/1:11,14:25:5.92:144,6,0	1/1:12,18:31:7.32:150,7,0	0/1:11,4:15:8.88:42,0,9
chr10	77307512	.	AAAT	A	3509.26	PASS	AB=0.986;AC=39;AF=0.696;AN=56;BaseQRankSum=1.537;DP=434;FS=7.030;HRun=0;HaplotypeScore=88.0559;InbreedingCoeff=0.2857;MQ=56.96;MQ0=11;MQRankSum=2.207;QD=9.80;ReadPosRankSum=-2.465;VQSLOD=1.3902;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,108,1948	1/1:5,1:6:14.28:103,14,0	0/0:5,0:2:5.96:0,6,54	0/0:4,0:2:3.01:0,3,42	1/1:4,12:16:35.63:399,36,0	0/1:10,0:10:22.09:22,0,49	1/1:11,0:11:21.49:89,21,0	1/1:26,2:27:61.39:397,61,0	0/1:18,0:18:70.30:70,0,178	1/1:14,0:14:36.99:231,37,0	1/1:14,3:17:31.90:262,32,0	0/1:13,0:13:8.57:9,0,116	0/1:9,0:9:36.01:36,0,92	1/1:11,1:12:16.40:98,16,0	1/1:17,0:16:29.35:121,29,0	1/1:11,0:11:16.22:75,16,0	1/1:39,1:39:63.68:302,64,0	0/1:14,0:13:10.96:134,0,11	1/1:24,1:21:16.89:257,17,0	1/1:12,0:10:19.08:96,19,0	1/1:14,0:14:7.27:71,7,0	0/1:8,1:9:49.59:50,0,125	0/1:16,0:14:25.56:26,0,144	0/0:22,0:22:12.05:0,12,425	1/1:4,6:9:20.70:247,21,0	1/1:27,1:26:60.69:382,61,0	1/1:8,0:7:7.77:32,8,0	0/0:2,0:1:0.47:0,0,1
chr10	77307513	.	AAT	A	6964.22	PASS	AB=0.941;AC=43;AF=0.768;AN=56;BaseQRankSum=-0.502;DP=434;FS=2.775;HRun=0;HaplotypeScore=68.6640;InbreedingCoeff=0.1921;MQ=57.00;MQ0=11;MQRankSum=1.236;QD=18.28;ReadPosRankSum=-1.789;VQSLOD=4.2785;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,117,1654	1/1:1,5:6:14.91:140,15,0	0/0:5,0:2:5.97:0,6,62	0/0:4,0:2:2.78:0,3,42	1/1:15,1:16:35.70:269,36,0	0/1:3,7:10:36.69:109,0,37	1/1:0,11:11:24.08:322,24,0	1/1:5,23:27:52.29:770,52,0	0/1:18,0:18:69.58:111,0,70	1/1:0,14:14:39.08:451,39,0	1/1:6,11:17:32.80:284,33,0	0/1:13,0:13:35.36:35,0,39	0/1:9,0:9:34.66:37,0,35	1/1:3,9:12:18.03:223,18,0	1/1:3,14:16:33:443,33,0	1/1:3,8:11:16.82:213,17,0	1/1:7,33:39:80.46:984,80,0	1/1:9,5:13:16:272,16,0	1/1:17,8:21:38.93:492,39,0	1/1:3,9:10:23.80:256,24,0	1/1:1,13:14:22.45:319,22,0	0/1:9,0:9:28.55:29,0,55	0/1:16,0:14:63.77:87,0,64	0/1:22,0:22:33.22:33,0,210	1/1:10,0:9:20.86:167,21,0	1/1:4,24:26:67.97:764,68,0	1/1:1,6:6:11.83:134,12,0	1/1:2,0:1:2.98:21,3,0
chr10	77307514	.	AT	A	4925.76	PASS	AB=0.978;AC=48;AF=0.857;AN=56;BaseQRankSum=6.782;DP=416;FS=0.000;HRun=1;HaplotypeScore=67.0365;InbreedingCoeff=0.4864;MQ=57.88;MQ0=11;MQRankSum=1.321;QD=13.53;ReadPosRankSum=-0.360;VQSLOD=3.4605;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,117,1317	1/1:6,0:6:14.75:93,15,0	0/0:5,0:2:5.97:0,6,56	0/0:4,0:2:2.84:0,3,35	1/1:14,0:14:34.98:201,35,0	0/1:8,0:8:25.31:47,0,25	1/1:11,0:11:23.74:157,24,0	1/1:28,0:27:40.89:436,41,0	1/1:16,2:18:18.54:186,19,0	1/1:14,0:14:38.75:289,39,0	1/1:14,0:14:32.39:205,32,0	1/1:11,2:13:14.83:152,15,0	1/1:7,1:8:14.66:99,15,0	1/1:10,1:11:17.70:114,18,0	1/1:17,0:16:32.64:217,33,0	1/1:9,1:10:12.39:132,12,0	1/1:36,2:37:80.16:592,80,0	1/1:14,0:13:29.34:218,29,0	1/1:22,2:20:48.89:381,49,0	1/1:11,1:10:23.80:181,24,0	1/1:14,0:14:26.73:182,27,0	1/1:8,0:8:3.42:40,3,0	1/1:14,2:14:3.24:170,3,0	0/1:21,1:22:28.18:103,0,28	1/1:7,1:7:20.37:118,20,0	1/1:26,0:25:66.01:490,66,0	1/1:6,1:6:11.91:100,12,0	1/1:2,0:1:2.98:21,3,0
chr10	77308253	.	TAC	T	3752.48	PASS	AB=0.789;AC=30;AF=0.556;AN=54;BaseQRankSum=-3.185;DP=570;FS=1.223;HRun=0;HaplotypeScore=84.4350;InbreedingCoeff=0.6230;MQ=69.18;MQ0=6;MQRankSum=1.236;QD=11.73;ReadPosRankSum=2.072;VQSLOD=3.5718;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:24.97:0,25,404	0/1:10,1:11:46.93:47,0,163	./.	0/0:26,0:15:0:0,0,0	0/0:16,0:27:14.41:0,14,137	1/1:9,18:27:48.13:534,48,0	0/1:9,8:17:24.33:179,0,24	0/1:27,0:28:43.54:65,0,44	0/0:15,0:28:29.98:0,30,255	1/1:8,13:23:41.71:412,42,0	1/1:8,9:17:12.03:134,12,0	0/0:12,0:18:11.91:0,12,104	0/0:11,0:17:13.31:0,13,117	1/1:7,13:19:26.91:281,27,0	1/1:6,10:16:21.06:234,21,0	1/1:7,9:17:20.87:214,21,0	1/1:5,5:11:11.87:114,12,0	1/1:8,9:17:27.07:300,27,0	1/1:9,4:13:12.01:123,12,0	1/1:5,11:16:21.06:234,21,0	1/1:19,13:33:23.90:248,24,0	0/0:10,0:21:9.01:0,9,98	0/0:9,0:15:15.01:0,15,162	0/0:13,0:28:14.99:0,15,129	0/0:7,0:20:20.99:0,21,181	1/1:13,9:22:26.15:276,26,0	0/1:10,13:25:9.56:295,0,10	1/1:2,4:6:6.01:64,6,0
chr10	77309370	.	A	AG	933.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.963;DP=747;FS=7.932;HRun=3;HaplotypeScore=71.4603;InbreedingCoeff=0.9832;MQ=85.49;MQ0=0;MQRankSum=-1.899;QD=32.20;ReadPosRankSum=-4.063;VQSLOD=1.7511;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,1426	0/0:5,0:5:15.05:0,15,180	0/0:31,0:31:79.99:0,80,892	0/0:30,0:30:81.21:0,81,944	0/0:29,0:29:84.22:0,84,992	0/0:22,0:22:60.15:0,60,696	0/0:28,0:28:81.24:0,81,961	1/1:3,26:29:78.21:1029,78,0	0/0:30,0:30:81.25:0,81,972	0/0:31,0:31:87.15:0,87,1007	0/0:15,0:15:42.13:0,42,501	0/0:38,0:38:99:0,105,1219	0/0:20,0:20:60.18:0,60,720	0/0:18,0:18:54.15:0,54,637	0/0:21,0:21:63.19:0,63,756	0/0:20,0:20:60.18:0,60,720	0/0:32,0:32:93.27:0,93,1105	0/0:31,0:31:87.18:0,87,991	0/0:28,0:28:84.20:0,84,965	0/0:23,0:23:63.19:0,63,756	0/0:56,0:56:99:0,162,1931	0/0:22,0:22:60.18:0,60,719	0/0:19,0:19:51.16:0,51,612	0/0:35,0:35:99:0,99,1163	0/0:13,0:13:33.10:0,33,396	0/0:38,0:38:99:0,111,1307	0/0:31,0:31:93.27:0,93,1101	0/0:9,0:9:27.08:0,27,324
chr10	77309976	.	C	CT	4772.12	PASS	AB=0.668;AC=42;AF=0.750;AN=56;BaseQRankSum=-4.506;DP=555;FS=1.032;HRun=13;HaplotypeScore=65.6936;InbreedingCoeff=0.2847;MQ=62.07;MQ0=2;MQRankSum=-0.953;QD=10.22;ReadPosRankSum=0.618;VQSLOD=4.2636;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,3:43:14.04:0,14,402	1/1:2,8:11:5.17:78,5,0	0/1:19,0:14:18.42:29,0,18	0/0:17,0:10:10.51:0,11,41	0/0:8,0:18:16.78:0,17,48	1/1:5,9:14:11.95:101,12,0	0/1:5,18:23:8.06:218,0,8	1/1:8,13:22:11.12:214,11,0	0/1:5,11:16:14.42:143,0,14	1/1:6,17:22:17.92:333,18,0	1/1:4,12:17:26.93:232,27,0	1/1:5,6:11:8.20:57,8,0	1/1:13,5:18:10.51:173,11,0	1/1:3,7:10:2.99:24,3,0	0/1:6,11:18:40.70:76,0,41	1/1:2,8:10:23.93:211,24,0	1/1:7,29:36:18.95:458,19,0	0/1:15,13:28:8.35:364,0,8	1/1:14,7:22:11.79:254,12,0	1/1:7,17:24:4.90:320,5,0	1/1:4,10:15:3.52:164,4,0	1/1:18,7:25:30.75:248,31,0	1/1:8,18:27:9.12:231,9,0	1/1:9,13:22:0.34:134,0,0	0/0:2,0:10:10.17:0,10,29	1/1:7,16:24:10.56:356,11,0	0/1:3,9:12:8.52:71,0,9	1/1:1,17:18:15.46:286,15,0
chr10	77310876	.	CTGCATGCG	C	10966.91	PASS	AC=48;AF=0.923;AN=52;BaseQRankSum=6.842;DP=615;FS=4.774;HRun=0;HaplotypeScore=158.7255;InbreedingCoeff=0.6400;MQ=69.27;MQ0=1;MQRankSum=-6.370;QD=21.21;ReadPosRankSum=1.467;VQSLOD=3.9579;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:90.29:0,90,3097	1/1:2,5:7:9.03:229,9,0	./.	0/0:18,0:17:7.05:0,7,53	1/1:7,15:22:18.02:394,18,0	1/1:9,15:24:30.10:764,30,0	1/1:11,19:30:27.09:686,27,0	1/1:14,9:23:23.81:232,24,0	1/1:10,14:24:21.07:535,21,0	1/1:11,20:31:53.96:1095,54,0	1/1:8,5:13:12.04:301,12,0	1/1:9,11:20:24.08:603,24,0	1/1:8,12:20:6.49:154,6,0	1/1:7,8:15:12.04:306,12,0	1/1:13,9:22:24.08:609,24,0	1/1:7,8:15:18.02:394,18,0	1/1:19,20:39:9.03:229,9,0	1/1:11,13:24:18.02:458,18,0	1/1:9,10:19:29.93:431,30,0	1/1:9,18:27:44.97:960,45,0	1/1:19,22:41:2.97:76,3,0	1/1:6,11:17:9.03:227,9,0	1/1:1,6:7:6.02:151,6,0	./.	1/1:9,17:26:21:470,21,0	1/1:8,13:21:39.03:845,39,0	1/1:6,13:19:30.10:743,30,0	1/1:8,3:11:3.01:76,3,0
chr10	77311636	.	T	TC	101.14	PASS	AB=0.794;AC=4;AF=0.071;AN=56;BaseQRankSum=2.926;DP=429;FS=5.195;HRun=0;HaplotypeScore=61.4593;InbreedingCoeff=0.4352;MQ=65.57;MQ0=21;MQRankSum=4.819;QD=1.44;ReadPosRankSum=0.887;VQSLOD=0.6028;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:30.80:0,31,236	0/0:1,0:1:0.89:0,1,2	0/1:29,0:8:8.47:8,0,83	0/0:38,0:17:1.67:0,2,102	1/1:21,0:19:17.50:162,18,0	0/0:18,0:16:39.98:0,40,303	0/0:11,0:11:21.95:0,22,145	0/0:25,0:18:37.82:0,38,283	0/0:12,0:12:17.89:0,18,166	0/0:12,0:12:31.83:0,32,243	0/0:8,0:7:14.99:0,15,77	0/0:13,0:13:20.09:0,20,127	0/0:8,0:8:17.82:0,18,138	0/0:14,0:13:32.44:0,32,227	0/0:20,0:19:27.42:0,27,193	0/0:13,0:13:18.13:0,18,152	0/0:20,0:19:26.11:0,26,193	0/0:20,0:19:36.76:0,37,273	0/0:16,0:16:42.55:0,43,290	0/0:8,0:7:20.23:0,20,144	0/0:8,0:8:20.80:0,21,162	0/0:5,0:5:14.17:0,14,106	0/0:11,0:11:26.85:0,27,181	0/0:14,0:13:17.91:0,18,145	0/1:6,14:19:11.88:39,0,12	0/0:20,0:20:57.48:0,57,457	0/0:22,0:20:32.67:0,33,234	0/0:7,0:6:17.98:0,18,153
chr10	77312711	.	TTTTC	T	227.61	PASS	AB=0.986;AC=11;AF=0.196;AN=56;BaseQRankSum=6.229;DP=441;FS=2.443;HRun=0;HaplotypeScore=78.4816;InbreedingCoeff=-0.0000;MQ=47.48;MQ0=16;MQRankSum=0.107;QD=2.03;ReadPosRankSum=5.603;VQSLOD=0.5909;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:50.79:0,51,531	0/0:7,0:7:14.86:0,15,119	0/0:26,0:3:2.97:0,3,20	0/1:12,0:4:0.33:0,0,68	0/0:23,0:21:19.80:0,20,114	0/0:23,0:23:21.12:0,21,239	0/0:21,0:21:41.80:0,42,264	0/0:17,0:17:25.74:0,26,172	0/1:12,0:12:17.40:39,0,17	0/0:27,0:26:31.20:0,31,340	0/0:17,0:16:22.70:0,23,200	0/1:13,1:14:14.80:93,0,15	0/1:6,0:5:4.85:5,0,47	0/0:9,0:9:5.88:0,6,36	0/0:16,0:16:20.11:0,20,151	0/1:10,0:9:3.49:3,0,53	0/0:24,0:24:9.73:0,10,180	0/0:21,0:19:26.52:0,27,173	0/0:14,0:14:3.28:0,3,165	0/1:14,1:15:0.31:0,0,244	0/1:9,0:9:2.70:3,0,48	0/1:10,0:9:38.95:39,0,39	0/1:11,0:11:22.72:23,0,66	1/1:11,2:13:19.18:151,19,0	0/0:13,0:13:6.73:0,7,208	0/0:14,0:14:30.73:0,31,249	0/0:18,0:18:37.26:0,37,284	0/0:12,0:12:1.05:0,1,85
chr10	77312828	.	CTGTGTGTG	C	1803.90	PASS	AB=0.793;AC=27;AF=0.563;AN=48;BaseQRankSum=3.586;DP=492;FS=15.150;HRun=0;HaplotypeScore=119.1361;InbreedingCoeff=0.6094;MQ=60.10;MQ0=17;MQRankSum=-2.999;QD=7.64;ReadPosRankSum=-0.030;VQSLOD=1.4106;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:33.58:0,34,1112	1/1:5,0:5:3:25,3,0	./.	./.	0/0:18,0:17:9.03:0,9,262	1/1:7,7:14:12.04:298,12,0	1/1:18,5:23:3.01:75,3,0	./.	0/0:21,0:21:43.38:0,43,1453	1/1:16,3:18:9.03:195,9,0	0/0:6,0:8:6:0,6,59	0/0:9,0:11:12.04:0,12,386	0/0:7,0:7:15.05:0,15,512	1/1:9,1:9:3.01:56,3,0	1/1:9,6:15:9.03:224,9,0	1/1:12,0:13:6.02:115,6,0	1/1:24,1:26:7.92:124,8,0	1/1:12,0:12:6.02:145,6,0	1/1:19,5:24:11.99:147,12,0	1/1:11,2:11:3.01:75,3,0	1/1:27,0:27:2.68:71,3,0	0/0:12,0:12:9.03:0,9,345	0/0:7,0:8:6.02:0,6,169	0/0:26,0:36:42.09:0,42,1319	0/0:9,0:9:6.02:0,6,214	0/1:17,4:22:99:278,0,131	./.	1/1:6,4:8:6.02:150,6,0
chr10	77314804	.	ATTTC	A	5899.19	PASS	AB=0.579;AC=33;AF=0.589;AN=56;BaseQRankSum=-1.444;DP=372;FS=0.000;HRun=0;HaplotypeScore=93.2172;InbreedingCoeff=0.8227;MQ=65.78;MQ0=10;MQRankSum=-3.323;QD=32.24;ReadPosRankSum=3.691;VQSLOD=4.8704;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.16:0,75,1579	1/1:1,0:1:3.01:57,3,0	0/0:31,0:11:16.46:0,16,205	0/0:39,1:20:10.18:0,10,398	0/0:18,0:18:39.45:0,39,471	1/1:8,5:13:23.91:397,24,0	1/1:6,0:6:15:132,15,0	1/1:4,16:18:36.02:428,36,0	0/0:19,0:18:40.57:0,41,427	1/1:2,7:9:26.96:442,27,0	1/1:7,4:11:33.10:529,33,0	0/0:10,0:9:15.41:0,15,157	0/0:11,0:11:20.77:0,21,175	0/1:3,8:11:3.92:191,0,4	1/1:9,8:16:30.03:426,30,0	1/1:4,9:13:33.10:528,33,0	1/1:7,6:10:21.06:315,21,0	1/1:6,3:9:21:284,21,0	1/1:5,7:11:22.32:392,22,0	1/1:5,4:9:21.06:330,21,0	1/1:5,1:6:3.01:38,3,0	0/0:2,0:2:3:0,3,27	0/0:6,0:6:6:0,6,79	0/0:8,0:7:11.68:0,12,112	0/0:12,0:11:20.43:0,20,291	1/1:9,5:14:33.11:552,33,0	1/1:5,11:16:45.14:748,45,0	1/1:3,0:2:6.02:111,6,0
chr10	77314807	.	TC	T	3137.05	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=1.414;DP=374;FS=14.394;HRun=1;HaplotypeScore=87.7136;InbreedingCoeff=0.5295;MQ=61.32;MQ0=13;MQRankSum=-3.873;QD=14.26;ReadPosRankSum=-1.168;VQSLOD=1.6652;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:59.08:0,59,818	1/1:1,0:1:3:26,3,0	0/0:34,2:7:8.68:0,9,126	0/0:44,1:20:16.02:0,16,226	0/0:17,0:18:1.12:0,1,94	1/1:14,1:15:24.84:187,25,0	1/1:7,0:7:15:132,15,0	1/1:18,0:16:35.89:290,36,0	0/1:20,0:19:96.23:137,0,96	1/1:9,1:10:29.60:206,30,0	1/1:12,0:12:32.89:266,33,0	0/1:11,0:10:58.60:82,0,59	0/1:9,0:9:35.26:87,0,35	0/1:11,0:11:1.77:79,0,2	1/1:14,0:13:29.96:248,30,0	1/1:11,1:12:32.92:266,33,0	1/1:12,0:12:21.29:152,21,0	1/1:10,0:10:20.80:159,21,0	1/1:8,2:9:23.77:165,24,0	1/1:11,0:11:20.73:153,21,0	1/1:4,0:4:2.97:20,3,0	0/0:1,0:1:3:0,3,26	0/0:5,0:5:2.51:0,3,14	0/0:7,0:6:11.94:0,12,92	0/0:13,0:12:11.53:0,12,98	1/1:12,2:14:34.58:272,35,0	1/1:16,0:16:44.66:341,45,0	1/1:3,0:2:6:52,6,0
chr10	77314818	.	TC	T	1931.57	PASS	AB=0.990;AC=38;AF=0.679;AN=56;BaseQRankSum=6.616;DP=441;FS=6.283;HRun=1;HaplotypeScore=86.4187;InbreedingCoeff=0.1225;MQ=46.17;MQ0=20;MQRankSum=-2.959;QD=6.50;ReadPosRankSum=1.010;VQSLOD=0.5793;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.55:0,67,654	1/1:2,0:2:0.78:13,1,0	0/0:51,8:5:8.29:0,8,78	0/0:52,2:19:16.44:0,16,201	0/1:18,0:18:28.14:28,0,59	0/1:16,1:17:5.51:126,0,6	0/1:6,0:6:0.07:0,0,17	1/1:12,0:10:2.96:72,3,0	0/1:19,0:18:54.61:68,0,55	1/1:16,1:15:12.74:125,13,0	1/1:14,0:13:27.60:181,28,0	0/1:10,0:9:24.06:24,0,30	0/1:8,0:8:40.35:40,0,43	1/1:12,0:12:20.03:129,20,0	1/1:21,0:18:23.69:175,24,0	1/1:10,1:11:19.30:218,19,0	0/1:17,0:17:6.90:73,0,7	0/1:11,0:11:18.23:36,0,18	0/1:20,1:20:71.17:92,0,71	1/1:10,0:10:21.43:125,21,0	1/1:5,0:5:1.25:3,1,0	1/1:1,0:1:2.99:24,3,0	0/0:5,0:5:6.39:0,6,26	0/1:6,0:5:0.83:64,0,1	1/1:12,0:10:3.19:21,3,0	1/1:20,0:20:4.33:177,4,0	1/1:23,0:23:26.99:243,27,0	1/1:4,0:2:5.86:38,6,0
chr10	77314819	.	C	CT	2245.57	PASS	AB=0.791;AC=33;AF=0.635;AN=52;BaseQRankSum=1.938;DP=448;FS=0.627;HRun=13;HaplotypeScore=85.7977;InbreedingCoeff=0.4421;MQ=44.09;MQ0=20;MQRankSum=-1.602;QD=8.14;ReadPosRankSum=1.079;VQSLOD=2.9445;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:49.82:0,50,335	1/1:1,1:2:3:27,3,0	0/0:59,0:5:2.93:0,3,19	0/0:53,0:18:12.24:0,12,88	1/1:7,11:18:24.71:338,25,0	1/1:10,8:18:6.42:171,6,0	0/1:5,1:6:9.04:47,0,9	1/1:11,2:11:3:25,3,0	0/1:19,0:18:3.12:3,0,88	1/1:12,5:15:15.25:159,15,0	1/1:8,6:12:14.67:91,15,0	0/0:10,0:9:1.47:0,1,43	0/0:7,0:8:13.54:0,14,83	1/1:9,3:12:15.26:110,15,0	1/1:7,16:18:17.83:128,18,0	1/1:3,9:12:26.90:213,27,0	0/1:8,10:17:3.56:47,0,4	0/1:7,3:11:5.76:80,0,6	0/1:13,7:20:10.35:165,0,10	1/1:5,5:10:20.46:144,20,0	1/1:5,0:5:0.47:1,0,0	./.	0/0:5,0:5:4.76:0,5,34	0/0:5,0:4:2.55:0,3,20	1/1:1,8:10:17.86:153,18,0	1/1:12,10:20:36.95:280,37,0	1/1:7,16:23:24.95:229,25,0	./.
chr10	77315243	.	C	CCGAGGA	1351.18	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.774;DP=577;FS=2.209;HRun=0;HaplotypeScore=121.3351;InbreedingCoeff=0.9537;MQ=81.81;MQ0=0;MQRankSum=-6.559;QD=45.04;ReadPosRankSum=-1.228;VQSLOD=3.0395;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,108,2373	0/0:9,0:9:21.07:0,21,472	0/0:19,0:19:42.12:0,42,885	0/0:15,0:15:26.85:0,27,421	1/1:6,8:14:12.04:402,12,0	0/0:17,0:17:45.15:0,45,992	0/0:24,0:24:69.22:0,69,1506	0/0:26,0:26:69.21:0,69,1466	0/0:8,0:8:21.07:0,21,471	0/0:25,0:25:45.15:0,45,979	0/0:25,0:25:51.16:0,51,1095	0/0:17,0:17:45.15:0,45,1004	0/0:22,0:22:57.20:0,57,1273	0/0:30,0:30:78.27:0,78,1716	0/0:21,0:21:51.17:0,51,1118	0/0:13,0:13:21.06:0,21,411	0/0:46,0:46:99:0,129,2829	0/0:24,0:24:69.24:0,69,1542	0/0:18,0:18:45.15:0,45,941	0/0:10,0:10:15.05:0,15,336	0/0:32,0:32:87.25:0,87,1815	0/0:18,0:18:42.14:0,42,943	0/0:16,0:16:36.10:0,36,764	0/0:25,0:25:66.23:0,66,1434	1/1:3,13:16:33.11:1066,33,0	0/0:24,0:24:57.20:0,57,1268	0/0:18,0:18:51.16:0,51,1102	0/0:4,0:4:12.04:0,12,270
chr10	77315641	.	CGTGTGTGT	C	5400.80	PASS	AB=0.770;AC=12;AF=0.214;AN=56;BaseQRankSum=-0.945;DP=783;FS=11.249;HRun=0;HaplotypeScore=240.3875;InbreedingCoeff=0.8281;MQ=57.28;MQ0=10;MQRankSum=-10.608;QD=27.56;ReadPosRankSum=4.019;VQSLOD=2.7057;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:36:60.21:0,60,1911	0/0:13,0:14:30.10:0,30,870	0/0:34,0:16:12.04:0,12,224	0/0:37,0:18:21.05:0,21,514	0/0:25,0:30:48.10:0,48,1442	0/0:21,0:22:30.10:0,30,869	0/0:15,0:27:21.07:0,21,604	0/0:31,0:31:63.17:0,63,1604	1/1:10,15:26:42.01:989,42,0	0/0:39,0:44:99:0,103,2685	0/0:19,0:20:39.13:0,39,1079	0/1:9,25:34:0.58:1177,0,1	1/1:4,17:22:39.13:942,39,0	0/0:20,0:25:39.13:0,39,1208	0/0:20,0:25:39.13:0,39,1174	0/1:16,1:27:19.59:20,0,1617	0/0:28,0:30:39.05:0,39,1019	0/0:14,0:16:27.09:0,27,742	0/0:16,0:25:48.14:0,48,956	0/0:22,0:25:36.12:0,36,1221	0/0:46,0:45:45.15:0,45,1308	1/1:6,16:23:32.76:701,33,0	1/1:9,24:34:56.82:1265,57,0	1/1:13,17:30:11.70:308,12,0	0/0:28,0:31:42.08:0,42,1287	0/0:23,0:25:51.17:0,51,1497	0/0:26,0:27:57.19:0,57,1508	0/0:9,0:12:33.11:0,33,1054
chr10	77315727	.	C	CGT	12952.06	PASS	AB=0.648;AC=28;AF=0.500;AN=56;BaseQRankSum=-13.914;DP=882;FS=0.319;HRun=0;HaplotypeScore=143.3325;InbreedingCoeff=0.4571;MQ=64.44;MQ0=4;MQRankSum=-0.900;QD=23.94;ReadPosRankSum=-0.730;VQSLOD=4.9784;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:66:0,66,727	1/1:1,9:10:27.09:423,27,0	0/0:38,0:25:20.59:0,21,181	0/1:40,0:30:34.32:34,0,203	0/0:4,0:23:39.73:0,40,195	1/1:6,16:23:13.17:649,13,0	1/1:7,13:21:21.97:488,22,0	1/1:20,17:39:25.16:759,25,0	0/0:46,0:47:98.94:0,99,1116	1/1:19,32:53:94.18:1549,94,0	0/1:5,13:20:28.10:521,0,28	0/0:41,0:44:77.64:0,78,897	0/0:26,0:26:63.19:0,63,735	0/1:5,21:27:6.80:826,0,7	0/1:11,26:40:20.74:1070,0,21	1/1:6,21:28:63.20:952,63,0	0/1:13,24:37:4.08:697,0,4	1/1:7,16:23:52.13:733,52,0	1/1:10,11:22:45.11:656,45,0	1/1:4,23:27:36.54:869,37,0	1/1:20,30:52:59.40:939,59,0	0/0:36,0:36:71.39:0,71,789	0/0:39,0:39:87.18:0,87,977	0/0:33,0:35:71.64:0,72,766	0/0:8,0:28:51.09:0,51,251	0/1:12,14:28:80.44:579,0,80	0/1:11,19:30:25.74:734,0,26	0/1:7,10:17:30.81:474,0,31
chr10	77317171	.	C	CGTGTGTGTGTGT	3899.83	PASS	AB=1.000;AC=35;AF=0.729;AN=48;BaseQRankSum=0.150;DP=662;FS=21.031;HRun=0;HaplotypeScore=219.6148;InbreedingCoeff=0.4365;MQ=48.59;MQ0=8;MQRankSum=-2.380;QD=8.01;ReadPosRankSum=-4.880;VQSLOD=-0.1107;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:45,0:47:16.13:16,0,958	1/1:6,0:6:3.01:46,3,0	./.	./.	1/1:9,0:27:2.95:19,3,0	0/1:20,0:20:35.75:102,0,36	1/1:37,0:36:26.87:320,27,0	1/1:24,0:22:20.90:206,21,0	0/0:18,0:18:26.80:0,27,674	1/1:28,0:28:36.05:440,36,0	1/1:20,0:21:11.50:117,12,0	0/1:16,0:18:1.85:2,0,222	0/0:27,0:27:33.01:0,33,863	1/1:18,0:17:6:88,6,0	1/1:13,0:19:3.01:156,3,0	1/1:18,0:19:11.82:369,12,0	1/1:19,0:19:20.32:175,20,0	1/1:20,0:20:14.71:217,15,0	1/1:23,0:22:24.37:287,24,0	./.	0/1:45,0:45:19.64:148,0,20	0/0:16,0:20:27.06:0,27,592	0/1:23,0:29:5.97:6,0,665	0/0:31,0:33:37.29:0,37,1291	1/1:14,0:17:11.55:194,12,0	1/1:26,0:24:30.54:475,31,0	1/1:21,0:23:25.74:516,26,0	./.
chr10	77318388	.	T	TTTTA	16792.05	PASS	AB=0.600;AC=49;AF=0.875;AN=56;BaseQRankSum=-6.764;DP=398;FS=22.730;HRun=0;HaplotypeScore=56.0672;InbreedingCoeff=0.7904;MQ=69.40;MQ0=0;MQRankSum=-3.990;QD=47.44;ReadPosRankSum=2.911;VQSLOD=3.3734;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:48.13:0,48,764	1/1:3,5:8:15.05:338,15,0	0/0:16,0:14:24.06:0,24,357	0/0:7,0:7:12.04:0,12,193	1/1:9,13:22:42.14:958,42,0	1/1:6,12:18:30.10:691,30,0	1/1:3,4:7:12.04:301,12,0	1/1:19,11:32:51.15:1090,51,0	1/1:4,12:16:33.11:826,33,0	1/1:5,10:16:39.13:970,39,0	1/1:5,10:15:36.12:885,36,0	1/1:6,7:13:21.07:526,21,0	1/1:2,8:10:18.06:449,18,0	1/1:2,6:8:15.05:375,15,0	1/1:4,5:9:15.05:376,15,0	1/1:2,6:8:21.07:518,21,0	1/1:5,12:17:30.10:752,30,0	1/1:5,7:12:24.08:600,24,0	1/1:8,13:21:36.12:869,36,0	1/1:3,12:15:36.12:902,36,0	1/1:2,5:7:15.05:376,15,0	1/1:2,0:2:3.01:50,3,0	1/1:3,12:16:33.11:822,33,0	1/1:2,5:7:15.05:367,15,0	1/1:0,13:16:33.11:827,33,0	0/1:7,14:21:3.02:1079,0,3	1/1:5,16:22:39.60:942,40,0	1/1:1,14:15:36.12:902,36,0
chr10	77318684	.	C	CT	1960.86	PASS	AB=0.916;AC=14;AF=0.250;AN=56;BaseQRankSum=9.130;DP=504;FS=9.755;HRun=9;HaplotypeScore=61.4227;InbreedingCoeff=0.8477;MQ=76.13;MQ0=0;MQRankSum=-6.567;QD=18.33;ReadPosRankSum=-1.979;VQSLOD=2.7181;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:65.01:0,65,552	0/0:4,0:4:9:0,9,78	0/1:18,2:18:0.89:1,0,183	0/0:10,0:10:2.85:0,3,82	0/0:20,0:20:59.97:0,60,516	0/0:19,0:19:44.99:0,45,390	0/0:18,0:18:41.98:0,42,364	0/0:36,0:36:95.97:0,96,833	1/1:2,11:13:33.08:358,33,0	0/0:21,0:21:53.98:0,54,469	0/0:13,0:13:32.73:0,33,285	1/1:7,13:20:57.13:613,57,0	1/1:3,11:14:33.09:364,33,0	0/0:18,0:18:32.98:0,33,286	0/0:17,0:17:44.97:0,45,387	0/1:11,1:12:0.20:0,0,224	0/0:18,0:18:50.97:0,51,437	0/0:28,0:28:74.96:0,75,651	0/0:23,0:22:59.94:0,60,514	0/0:19,1:20:14.81:0,15,357	0/0:18,0:18:44.98:0,45,391	1/1:1,9:10:30.08:331,30,0	1/1:3,6:9:24.04:244,24,0	1/1:2,7:9:21.06:232,21,0	0/0:19,0:19:44.98:0,45,391	0/0:27,1:28:41.80:0,42,589	0/0:28,0:28:60.44:0,60,522	0/0:15,0:15:44.99:0,45,391
chr10	77318718	.	TA	T	2991.24	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.797;DP=528;FS=11.982;HRun=1;HaplotypeScore=62.9557;InbreedingCoeff=0.9928;MQ=68.96;MQ0=0;MQRankSum=-8.575;QD=35.61;ReadPosRankSum=1.528;VQSLOD=2.9399;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1535	0/0:4,0:4:12.04:0,12,175	0/0:16,0:16:45.13:0,45,638	0/0:10,0:10:24.06:0,24,335	0/0:23,0:23:69.18:0,69,938	0/0:18,0:18:45.10:0,45,598	0/0:17,0:17:51.16:0,51,727	0/0:33,0:33:99:0,99,1365	1/1:0,14:14:42.14:583,42,0	0/0:22,0:22:66.21:0,66,947	0/0:14,0:14:42.13:0,42,593	1/1:2,16:18:48.08:624,48,0	1/1:1,15:16:48.15:651,48,0	0/0:14,0:14:39.13:0,39,566	0/0:25,0:25:69.22:0,69,984	0/0:9,0:9:27.09:0,27,395	0/0:20,0:20:57.17:0,57,812	0/0:28,0:28:81.24:0,81,1161	0/0:22,0:22:66.18:0,66,942	0/0:23,0:23:69.18:0,69,933	0/0:23,0:23:66.20:0,66,945	1/1:0,14:14:42.14:583,42,0	1/1:0,9:9:27.05:353,27,0	1/1:3,10:13:33.01:384,33,0	0/0:17,0:17:48.12:0,48,660	0/0:31,0:31:93.31:0,93,1342	0/0:27,0:27:75.13:0,75,1021	0/0:12,0:12:36.12:0,36,526
chr10	77319376	.	TAA	T	504.89	PASS	AB=0.808;AC=12;AF=0.214;AN=56;BaseQRankSum=3.785;DP=334;FS=2.639;HRun=17;HaplotypeScore=39.7056;InbreedingCoeff=0.7134;MQ=70.89;MQ0=6;MQRankSum=1.304;QD=7.11;ReadPosRankSum=2.240;VQSLOD=-0.7407;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:32:57.28:0,57,504	0/0:1,0:1:3.01:0,3,38	0/0:36,0:13:10.04:0,10,93	0/1:18,0:5:0:0,0,0	0/0:6,0:11:3.66:0,4,60	0/0:9,0:10:20.37:0,20,189	0/0:7,0:10:21.58:0,22,184	0/0:18,0:18:35.99:0,36,378	1/1:2,3:6:17.69:127,18,0	0/0:14,0:14:17.95:0,18,165	0/0:3,0:4:11.67:0,12,98	1/1:2,8:10:17.83:142,18,0	1/1:3,8:11:20.84:166,21,0	0/0:4,0:4:8.92:0,9,63	0/0:11,0:11:23.59:0,24,220	0/0:7,0:9:22.72:0,23,209	0/0:21,1:28:35.08:0,35,573	0/0:6,0:6:14.95:0,15,126	0/0:12,0:14:19.75:0,20,168	0/0:4,0:5:14.38:0,14,135	0/0:13,0:15:29.89:0,30,320	0/1:2,1:4:3.21:18,0,3	1/1:2,4:7:8.65:59,9,0	1/1:2,11:13:14.72:158,15,0	0/0:3,0:10:7.75:0,8,55	0/0:10,1:11:0.24:0,0,199	0/0:10,0:10:15.04:0,15,172	0/0:3,0:3:8.97:0,9,72
chr10	77319566	.	C	CAAA	1833.48	PASS	AB=0.833;AC=44;AF=0.786;AN=56;BaseQRankSum=0.671;DP=165;FS=2.049;HRun=15;HaplotypeScore=32.7677;InbreedingCoeff=0.4973;MQ=56.60;MQ0=10;MQRankSum=-1.493;QD=14.21;ReadPosRankSum=-2.962;VQSLOD=0.1204;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:15:28.41:0,28,292	1/1:1,0:2:2.99:23,3,0	0/0:4,0:2:2.84:0,3,15	0/0:4,0:4:6.29:0,6,45	1/1:1,1:4:8.87:59,9,0	1/1:2,0:3:6:54,6,0	1/1:3,2:5:11.50:130,12,0	1/1:6,1:7:5.98:57,6,0	0/0:2,0:8:2.39:0,2,51	1/1:2,4:8:15.03:218,15,0	1/1:4,2:6:11.07:120,11,0	0/1:2,0:4:0.12:0,0,23	0/0:1,0:2:0.57:0,1,3	1/1:5,0:4:4.40:18,4,0	1/1:0,1:1:3.01:51,3,0	1/1:4,2:6:11.87:145,12,0	1/1:6,2:10:12.02:167,12,0	1/1:3,3:6:9.01:125,9,0	1/1:12,2:16:27.86:333,28,0	1/1:3,0:6:11.96:119,12,0	0/1:2,0:2:0:0,0,0	1/1:1,0:1:2.98:22,3,0	1/1:2,0:4:1.25:3,1,0	1/1:0,0:3:1.25:3,1,0	1/1:2,0:3:5.98:46,6,0	1/1:2,0:6:10.23:99,10,0	1/1:6,0:6:11.45:109,11,0	1/1:6,1:4:6:74,6,0
chr10	77319687	.	G	GT	112.95	PASS	AB=0.722;AC=6;AF=0.200;AN=30;BaseQRankSum=3.441;DP=66;FS=5.153;HRun=0;HaplotypeScore=25.0433;InbreedingCoeff=-0.0929;MQ=61.02;MQ0=3;MQRankSum=-1.998;QD=7.53;ReadPosRankSum=0.721;VQSLOD=2.6369;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:7,1:6:40.93:41,0,73	./.	0/0:9,0:3:9.02:0,9,110	0/0:8,0:3:3.01:0,3,42	./.	./.	0/0:6,0:6:15.05:0,15,210	0/0:5,0:4:6.02:0,6,84	0/1:1,1:2:35.86:42,0,36	0/1:1,1:2:35.87:42,0,36	0/0:4,0:2:6.02:0,6,83	1/1:0,1:1:3.01:48,3,0	./.	./.	./.	./.	0/0:6,0:5:9.03:0,9,125	0/0:5,0:5:15.05:0,15,205	0/0:3,0:2:3.01:0,3,42	./.	./.	./.	./.	0/0:3,0:3:9.03:0,9,126	./.	0/1:1,1:2:35.88:42,0,36	./.	0/0:1,0:1:3.01:0,3,42
chr10	77322871	.	GGT	G	71.09	PASS	AB=0.923;AC=10;AF=0.333;AN=30;BaseQRankSum=-0.503;DP=211;FS=0.000;HRun=0;HaplotypeScore=27.0814;InbreedingCoeff=0.1662;MQ=48.91;MQ0=51;MQRankSum=1.336;QD=1.09;ReadPosRankSum=-2.219;VQSLOD=0.7808;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:43,0:12:18.84:0,19,231	0/0:62,0:5:8.70:0,9,105	1/1:5,8:6:2.27:75,2,0	0/0:3,0:2:2.80:0,3,13	./.	./.	./.	0/1:9,0:5:8.31:8,0,13	0/0:6,0:2:2.37:0,2,8	./.	0/0:3,0:1:2.68:0,3,11	0/0:2,0:1:2.04:0,2,6	./.	0/0:2,0:1:0.47:0,0,1	./.	./.	./.	0/0:8,0:5:4.96:0,5,24	./.	1/1:3,0:3:2.90:16,3,0	1/1:4,0:2:2.90:16,3,0	./.	0/1:5,4:9:3.04:44,0,3	0/1:10,0:8:0.79:1,0,27	./.	0/1:17,0:3:8.26:8,0,21
chr10	77323594	.	TTTTTTTTTTTTTTTTGTTTTTTG	T	203.61	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=-1.103;DP=350;FS=10.853;HRun=0;HaplotypeScore=100.5020;InbreedingCoeff=0.3430;MQ=31.34;MQ0=125;MQRankSum=-3.032;QD=6.36;ReadPosRankSum=-1.888;VQSLOD=0.2703;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:23:54.19:0,54,3164	0/0:4,0:2:6.02:0,6,227	0/0:13,0:2:5.91:0,6,51	0/0:25,0:4:9.86:0,10,96	0/0:9,0:7:12.04:0,12,362	0/0:11,0:8:24.08:0,24,930	0/0:16,0:7:3.01:0,3,208	0/0:22,0:4:12.04:0,12,560	0/0:3,0:2:0:0,0,0	0/0:18,0:7:18.06:0,18,666	0/0:3,0:3:6.02:0,6,298	1/1:5,4:7:2.88:163,3,0	0/1:7,0:3:4.82:5,0,10	0/0:10,0:3:3.01:0,3,216	./.	0/0:3,0:3:6.02:0,6,242	0/0:38,0:31:72.25:0,72,4205	0/0:15,0:8:18.06:0,18,1059	0/0:26,0:4:12.04:0,12,581	0/0:7,0:6:14.90:0,15,542	0/0:13,0:5:12.04:0,12,661	0/1:3,0:2:0.30:46,0,0	0/1:6,0:3:6.14:92,0,6	1/1:7,0:2:1.55:4,2,0	0/0:5,0:2:6.02:0,6,335	0/0:17,0:8:24.07:0,24,856	0/0:6,0:5:15.05:0,15,847	0/0:24,0:6:12.04:0,12,428
chr10	77323705	.	C	CT	818.79	PASS	AB=0.955;AC=13;AF=0.232;AN=56;BaseQRankSum=-1.309;DP=400;FS=9.348;HRun=8;HaplotypeScore=44.5946;InbreedingCoeff=0.7186;MQ=56.03;MQ0=37;MQRankSum=0.126;QD=10.50;ReadPosRankSum=-1.915;VQSLOD=0.5942;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:56.99:0,57,517	0/0:2,0:1:3:0,3,27	0/0:41,0:8:13.79:0,14,108	0/0:36,1:8:9.06:0,9,57	0/0:19,0:19:35.94:0,36,319	0/0:15,0:13:36.01:0,36,325	0/0:8,0:8:9:0,9,82	0/0:15,0:11:21:0,21,188	1/1:9,6:15:27.04:281,27,0	0/0:11,0:9:18:0,18,165	0/0:4,0:4:3:0,3,27	1/1:0,5:5:6.02:69,6,0	1/1:4,3:7:9.01:94,9,0	0/0:8,0:8:20.97:0,21,181	0/0:5,0:5:14.99:0,15,132	0/0:11,0:11:27.01:0,27,246	0/0:35,0:33:62.97:0,63,564	0/0:24,0:23:40.58:0,41,329	0/1:20,1:12:8.32:8,0,173	0/0:5,0:5:6:0,6,55	0/0:8,0:7:15:0,15,133	1/1:7,8:13:24.07:266,24,0	1/1:0,5:5:6.02:65,6,0	1/1:7,3:9:18.05:207,18,0	0/0:9,0:8:12:0,12,110	0/0:14,0:10:20.99:0,21,189	0/0:18,0:17:35.93:0,36,315	0/0:7,0:7:5:0,5,26
chr10	77323720	.	CT	C	2189.36	PASS	AB=0.777;AC=48;AF=0.857;AN=56;BaseQRankSum=-1.783;DP=382;FS=6.118;HRun=13;HaplotypeScore=43.4598;InbreedingCoeff=0.2821;MQ=64.57;MQ0=29;MQRankSum=-0.467;QD=6.99;ReadPosRankSum=2.669;VQSLOD=1.6160;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,1:23:13.68:0,14,282	1/1:1,2:2:2.96:22,3,0	0/0:46,0:10:15.62:0,16,121	0/1:48,0:15:7:7,0,35	1/1:2,0:13:16.27:47,16,0	1/1:3,10:13:19.91:137,20,0	1/1:3,6:9:8.94:66,9,0	1/1:7,3:6:8.92:66,9,0	1/1:8,5:13:19.92:137,20,0	1/1:1,6:6:11.86:85,12,0	1/1:0,4:4:5.96:43,6,0	1/1:4,1:5:2.98:22,3,0	1/1:4,4:8:12.37:86,12,0	1/1:3,4:7:8.93:66,9,0	1/1:3,4:7:5.92:44,6,0	1/1:2,8:10:17.88:131,18,0	1/1:11,24:33:44.34:345,44,0	0/1:14,10:25:6.10:239,0,6	1/1:11,9:17:32.83:214,33,0	1/1:5,1:6:4.73:32,5,0	0/1:2,4:6:14.24:73,0,14	1/1:9,2:9:11.81:80,12,0	1/1:3,1:4:2.98:22,3,0	0/1:8,2:10:1.51:108,0,2	1/1:1,0:6:8.14:23,8,0	1/1:4,6:9:17.49:119,17,0	1/1:6,9:16:13.92:93,14,0	1/1:2,0:2:2.98:21,3,0
chr10	77324075	.	AG	A	7259.67	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-4.334;DP=451;FS=1.313;HRun=7;HaplotypeScore=56.6280;InbreedingCoeff=0.9540;MQ=69.21;MQ0=0;MQRankSum=-0.459;QD=24.78;ReadPosRankSum=1.579;VQSLOD=5.2659;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:34:62.69:0,63,1101	1/1:0,10:10:26.97:265,27,0	0/0:13,0:11:17.89:0,18,203	0/0:12,0:10:18.94:0,19,198	0/0:20,0:20:54.16:0,54,664	1/1:1,9:10:30.07:305,30,0	1/1:2,29:31:63.14:643,63,0	1/1:0,9:9:20.85:204,21,0	0/0:3,0:13:34.03:0,34,169	1/1:0,14:14:42.09:426,42,0	1/1:0,9:9:17.92:151,18,0	0/0:4,0:18:34.10:0,34,175	0/0:2,0:9:14.27:0,14,72	1/1:1,9:10:27.06:275,27,0	1/1:0,12:12:24.05:245,24,0	1/1:1,20:21:54.12:549,54,0	1/1:1,32:33:81.18:826,81,0	1/1:2,22:24:60.14:612,60,0	1/1:1,14:15:42.09:424,42,0	1/1:2,8:10:12.02:122,12,0	1/1:5,31:36:87.19:886,87,0	0/0:1,0:12:28.71:0,29,162	0/0:1,0:4:8.65:0,9,49	0/0:1,0:15:34.23:0,34,174	0/0:8,0:8:24.04:0,24,285	1/1:2,23:25:66.08:654,66,0	1/1:1,21:22:63.14:642,63,0	1/1:0,2:2:3.01:31,3,0
chr10	77325232	.	T	TTTTTGTTGG	11051.58	PASS	AB=0.810;AC=48;AF=0.857;AN=56;BaseQRankSum=-4.182;DP=594;FS=8.318;HRun=0;HaplotypeScore=133.5829;InbreedingCoeff=0.5821;MQ=55.17;MQ0=26;MQRankSum=-1.476;QD=24.08;ReadPosRankSum=6.268;VQSLOD=2.9733;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:46.44:0,46,743	1/1:3,0:3:6.02:117,6,0	0/0:54,0:18:42.68:0,43,558	0/0:53,0:17:16.94:0,17,121	0/1:15,17:37:76.22:308,0,76	1/1:15,0:15:14.32:204,14,0	1/1:10,0:10:6.78:193,7,0	1/1:28,0:26:49.59:793,50,0	1/1:17,0:16:12:311,12,0	1/1:18,0:18:38.07:739,38,0	1/1:25,0:22:35.97:649,36,0	1/1:16,0:16:47.94:797,48,0	1/1:10,0:10:7.99:518,8,0	1/1:20,0:20:32.95:716,33,0	1/1:12,0:12:11.98:217,12,0	1/1:14,0:13:16.55:263,17,0	1/1:19,0:19:19.56:313,20,0	1/1:18,0:16:20.92:433,21,0	1/1:22,0:19:42.25:622,42,0	1/1:13,0:12:17.99:379,18,0	1/1:17,0:15:14.08:241,14,0	1/1:17,0:17:17.80:301,18,0	1/1:28,0:27:36.02:597,36,0	1/1:15,0:14:5.99:120,6,0	0/1:20,0:20:41.54:452,0,42	1/1:19,0:19:39.04:788,39,0	1/1:32,0:28:41.68:864,42,0	1/1:12,0:10:5.90:116,6,0
chr10	77325235	.	T	TTGTTGG	12597.86	PASS	AB=0.876;AC=42;AF=0.750;AN=56;BaseQRankSum=-5.564;DP=628;FS=5.596;HRun=0;HaplotypeScore=106.5961;InbreedingCoeff=0.2701;MQ=53.23;MQ0=28;MQRankSum=-1.245;QD=25.87;ReadPosRankSum=7.718;VQSLOD=3.7049;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:54.54:0,55,878	1/1:2,1:3:6.02:163,6,0	0/0:56,0:18:49.69:0,50,683	0/0:58,0:16:4.82:0,5,103	0/1:35,0:33:99:199,0,393	1/1:7,9:19:21.66:349,22,0	0/1:11,0:11:5.84:251,0,6	1/1:16,10:30:46.56:861,47,0	1/1:16,1:16:12:338,12,0	1/1:5,12:20:41.62:817,42,0	1/1:8,14:23:38.13:924,38,0	0/1:15,0:16:5.99:766,0,6	1/1:12,0:12:7.57:538,8,0	0/1:20,1:21:5.39:703,0,5	1/1:3,7:12:14.93:337,15,0	0/1:4,8:14:0.51:316,0,1	1/1:20,0:20:16.48:268,16,0	1/1:15,0:15:23.66:496,24,0	1/1:10,6:22:43.80:852,44,0	1/1:6,9:16:20.91:487,21,0	0/1:6,10:17:0.66:250,0,1	1/1:4,11:17:17.80:392,18,0	1/1:11,14:30:38.63:842,39,0	1/1:15,0:15:9:193,9,0	0/1:22,0:22:99:371,0,212	1/1:5,12:19:24.08:826,24,0	0/1:29,0:27:1.50:898,0,2	1/1:8,5:10:4.37:161,4,0
chr10	77325236	.	T	TGTTGG	11377.55	PASS	AB=0.802;AC=38;AF=0.679;AN=56;BaseQRankSum=-4.758;DP=615;FS=2.153;HRun=0;HaplotypeScore=105.7649;InbreedingCoeff=0.0510;MQ=52.60;MQ0=28;MQRankSum=-2.077;QD=24.16;ReadPosRankSum=8.985;VQSLOD=3.6409;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:57.61:0,58,974	1/1:1,1:3:6.02:155,6,0	0/0:56,0:18:50.21:0,50,730	0/0:61,0:17:23.62:0,24,158	0/1:33,0:31:99:172,0,513	0/1:16,0:17:0.65:247,0,1	0/1:4,5:12:0.44:258,0,0	0/1:21,0:20:12.58:605,0,13	1/1:4,11:16:11.82:316,12,0	1/1:18,0:18:32.13:665,32,0	1/1:23,0:21:38.40:789,38,0	0/1:11,5:16:23.88:743,0,24	0/1:4,8:13:26.05:537,0,26	0/1:7,12:21:47.23:686,0,47	1/1:10,0:11:15.06:255,15,0	0/1:13,0:13:6.46:260,0,6	1/1:10,6:23:22.02:339,22,0	1/1:15,2:15:19.65:475,20,0	0/1:22,1:20:22.82:596,0,23	1/1:14,0:14:20.61:421,21,0	0/1:17,0:15:17.23:136,0,17	1/1:12,1:14:17.98:374,18,0	1/1:30,2:32:40.59:880,41,0	1/1:4,10:15:8.98:171,9,0	0/1:11,8:22:99:352,0,279	1/1:20,1:21:21.06:895,21,0	0/1:12,17:29:6.30:897,0,6	1/1:14,1:12:3.63:153,4,0
chr10	77325239	.	T	TGG	2883.02	PASS	AB=0.965;AC=28;AF=0.500;AN=56;BaseQRankSum=6.194;DP=607;FS=23.281;HRun=0;HaplotypeScore=106.2188;InbreedingCoeff=-0.7574;MQ=49.97;MQ0=28;MQRankSum=-1.398;QD=5.49;ReadPosRankSum=10.072;VQSLOD=0.5397;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:52.04:0,52,686	1/1:2,0:2:5.72:33,6,0	0/0:57,0:16:27.86:0,28,451	0/1:61,0:16:23.67:24,0,96	0/1:29,1:28:76.55:77,0,450	0/1:19,0:19:15.46:15,0,254	0/1:12,0:12:53.97:57,0,54	0/1:21,0:19:99:181,0,160	0/1:14,0:13:23.59:82,0,24	0/1:19,1:20:99:301,0,108	0/1:27,0:24:68.08:221,0,68	0/1:12,4:16:80.85:344,0,81	0/1:13,0:13:97.84:135,0,98	0/1:19,1:20:99:168,0,139	0/1:10,1:11:29.55:68,0,30	0/1:13,0:12:19.95:83,0,20	0/1:21,0:21:33.45:33,0,191	0/1:11,6:15:61.20:136,0,61	0/1:24,0:21:57.30:57,0,310	0/1:16,0:15:91.92:92,0,121	0/1:18,0:16:33.78:34,0,107	0/1:13,1:14:17.66:94,0,18	0/1:35,0:33:99:145,0,131	1/1:14,0:13:0.41:48,0,0	0/1:19,1:20:86.08:86,0,332	0/1:20,1:21:83.54:352,0,84	0/1:29,0:25:99:158,0,210	0/1:16,0:13:14.27:14,0,114
chr10	77326522	.	T	TACACACACACACAC	15914.12	PASS	AC=44;AF=0.815;AN=54;BaseQRankSum=-2.089;DP=660;FS=0.000;HRun=0;HaplotypeScore=205.1884;InbreedingCoeff=0.7996;MQ=58.53;MQ0=5;MQRankSum=-6.402;QD=32.95;ReadPosRankSum=-1.898;VQSLOD=3.3191;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:58.64:0,59,2481	1/1:1,9:12:11.83:562,12,0	0/0:40,0:26:15.43:0,15,380	0/0:38,0:29:37.15:0,37,544	0/0:7,0:28:38.41:0,38,376	1/1:7,6:19:3.01:202,3,0	1/1:30,0:30:41.79:1070,42,0	1/1:33,0:31:48.10:1247,48,0	1/1:2,0:20:6.02:286,6,0	1/1:5,11:24:36.52:935,37,0	1/1:17,0:17:6.02:405,6,0	./.	1/1:1,0:13:6.02:286,6,0	1/1:1,5:14:12.04:731,12,0	1/1:5,3:22:15.05:895,15,0	1/1:4,8:17:12.04:565,12,0	1/1:13,10:34:6.02:405,6,0	1/1:5,8:17:12.04:667,12,0	1/1:13,0:13:27.06:602,27,0	1/1:6,15:26:6.02:386,6,0	1/1:28,0:26:28.98:609,29,0	1/1:1,0:23:18.06:817,18,0	1/1:3,0:13:12.04:538,12,0	1/1:32,0:38:26.96:811,27,0	0/0:2,0:13:16.67:0,17,220	1/1:30,1:31:66.15:1981,66,0	1/1:19,1:20:45.08:1326,45,0	1/1:3,9:17:9.03:589,9,0
chr10	77326541	.	ACGCATG	A	1210.92	PASS	AB=0.982;AC=14;AF=0.250;AN=56;BaseQRankSum=4.804;DP=632;FS=33.276;HRun=0;HaplotypeScore=169.4658;InbreedingCoeff=-0.3221;MQ=52.89;MQ0=5;MQRankSum=-3.657;QD=3.64;ReadPosRankSum=0.332;VQSLOD=0.8130;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:53:93.45:0,93,3814	0/0:8,0:8:13.29:0,13,302	0/1:40,0:27:4.44:4,0,1678	0/0:33,0:26:67.83:0,68,1469	0/0:24,0:24:55.01:0,55,1202	0/0:17,0:16:21.54:0,22,504	0/1:33,0:33:99:137,0,855	0/1:17,9:24:99:323,0,824	0/0:17,0:17:20.39:0,20,406	0/0:18,0:18:39.58:0,40,931	0/0:17,0:17:9.03:0,9,215	0/0:11,0:11:12.04:0,12,296	0/0:20,0:20:13.01:0,13,640	0/1:13,0:13:4.39:4,0,257	0/0:20,0:20:11.08:0,11,660	0/1:16,0:16:27.16:27,0,537	0/0:30,0:30:32.29:0,32,631	0/1:17,0:17:25.13:25,0,682	0/1:16,0:16:96.69:97,0,560	0/1:18,0:17:22.45:22,0,228	0/1:36,0:34:22.84:23,0,1080	0/1:18,0:18:6.70:7,0,516	0/1:11,0:11:36.68:37,0,266	0/1:35,0:35:80.67:81,0,409	0/0:17,0:17:30.10:0,30,825	0/1:32,0:32:99:462,0,1333	0/1:22,0:22:99:112,0,1084	0/0:13,0:13:17.95:0,18,385
chr10	77326658	.	T	TTGTGTG	6046.99	PASS	AB=0.777;AC=38;AF=0.731;AN=52;BaseQRankSum=-2.682;DP=593;FS=1.993;HRun=0;HaplotypeScore=154.3387;InbreedingCoeff=0.5171;MQ=57.14;MQ0=6;MQRankSum=-4.124;QD=14.71;ReadPosRankSum=-0.738;VQSLOD=4.3411;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:17.49:0,17,259	1/1:1,3:7:6.02:193,6,0	./.	./.	0/0:32,0:32:33.45:0,33,583	1/1:9,8:20:20.22:580,20,0	1/1:14,3:19:12.04:328,12,0	1/1:26,0:24:26.97:392,27,0	0/0:15,0:28:1.74:0,2,3	1/1:32,0:32:33.08:683,33,0	1/1:12,2:15:6.02:144,6,0	0/1:12,0:15:31.93:32,0,35	1/1:7,0:12:2.37:8,2,0	1/1:9,7:17:12.04:341,12,0	1/1:19,0:19:9.03:210,9,0	1/1:8,0:15:6.02:77,6,0	1/1:16,8:29:28.45:651,28,0	1/1:13,0:13:9.03:163,9,0	1/1:20,0:19:20.11:304,20,0	1/1:25,3:27:31.31:745,31,0	1/1:24,5:30:2.64:96,3,0	0/0:11,0:18:3.44:0,3,7	0/0:9,0:21:3.35:0,3,7	0/1:22,0:36:6.76:16,0,7	0/0:8,0:8:6.02:0,6,122	1/1:24,0:25:30.10:695,30,0	1/1:8,9:18:9.92:292,10,0	1/1:10,1:13:3.01:97,3,0
chr10	77327781	.	CTT	C	2519.37	PASS	AB=0.739;AC=30;AF=0.536;AN=56;BaseQRankSum=1.045;DP=498;FS=0.000;HRun=14;HaplotypeScore=79.3266;InbreedingCoeff=0.5906;MQ=60.74;MQ0=15;MQRankSum=-3.350;QD=10.00;ReadPosRankSum=2.949;VQSLOD=2.1874;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:38:95.90:0,96,1076	1/1:3,6:8:7.08:95,7,0	0/0:38,0:13:15.06:0,15,169	0/0:34,0:14:1.22:0,1,173	0/0:28,0:25:10.48:0,10,56	1/1:5,2:7:5.90:55,6,0	0/1:10,2:11:8.64:93,0,9	0/1:21,8:30:20.40:270,0,20	0/0:3,0:16:26.94:0,27,148	1/1:5,16:21:29.27:320,29,0	1/1:6,5:11:6.18:104,6,0	0/0:12,0:15:16.18:0,16,82	0/0:6,0:8:13.43:0,13,80	1/1:4,2:6:9.87:80,10,0	1/1:8,5:12:16.08:162,16,0	1/1:5,3:8:4.68:76,5,0	1/1:11,8:18:29.95:276,30,0	1/1:6,4:9:11.50:110,11,0	0/1:12,7:16:11.17:191,0,11	1/1:16,8:27:6.04:183,6,0	1/1:7,4:11:5.70:54,6,0	0/0:8,0:16:14.97:0,15,52	0/0:8,0:18:28.17:0,28,110	0/0:5,0:15:30.44:0,30,119	0/0:14,0:14:6.65:0,7,17	1/1:13,7:21:34.31:345,34,0	1/1:8,7:14:22.07:184,22,0	0/1:4,8:11:2.97:120,0,3
chr10	77327794	.	TTC	T	1490.57	PASS	AB=0.988;AC=26;AF=0.464;AN=56;BaseQRankSum=7.888;DP=533;FS=0.000;HRun=0;HaplotypeScore=92.3823;InbreedingCoeff=0.0284;MQ=51.03;MQ0=23;MQRankSum=-2.611;QD=4.54;ReadPosRankSum=3.090;VQSLOD=1.8101;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:94.33:0,94,1137	0/1:12,0:11:16.88:56,0,17	0/0:36,0:11:12.50:0,12,84	0/0:34,0:11:0.48:0,0,109	1/1:29,0:26:12.47:68,12,0	0/1:11,0:10:19.78:29,0,20	0/1:11,0:8:9.84:16,0,10	0/1:29,0:29:35.50:139,0,36	0/0:18,0:18:31.42:0,31,233	0/1:22,0:21:33.45:101,0,33	0/1:14,0:13:27.92:30,0,28	0/0:16,0:15:16.70:0,17,111	0/1:10,0:9:2.70:3,0,131	0/1:5,0:5:6.92:26,0,7	1/1:15,1:15:4.98:111,5,0	0/1:9,1:10:17.66:26,0,18	1/1:26,0:25:28.69:215,29,0	1/1:12,0:8:14.37:54,14,0	0/1:20,0:16:11.87:102,0,12	0/1:27,1:28:35.71:145,0,36	0/1:7,0:7:1.42:18,0,1	0/0:20,0:18:22.78:0,23,200	0/0:17,0:17:24.50:0,24,208	0/0:23,0:18:28.21:0,28,213	1/1:12,0:12:29.81:232,30,0	1/1:20,1:20:18.15:172,18,0	0/1:19,1:19:7.80:74,0,8	0/1:13,0:11:18.31:52,0,18
chr10	77327795	.	TC	T	1039.94	PASS	AB=0.968;AC=26;AF=0.464;AN=56;BaseQRankSum=1.617;DP=529;FS=1.415;HRun=1;HaplotypeScore=86.7369;InbreedingCoeff=-0.5087;MQ=49.29;MQ0=23;MQRankSum=-3.135;QD=2.52;ReadPosRankSum=0.284;VQSLOD=-0.7042;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:58.91:0,59,812	0/1:12,0:11:15.49:15,0,39	0/1:33,0:9:18.68:19,0,58	0/0:32,0:9:0.59:0,1,85	1/1:27,1:25:11.80:76,12,0	0/1:11,0:10:11.82:12,0,30	0/1:10,0:7:1.87:2,0,34	0/1:27,1:28:99:119,0,103	0/0:19,0:19:22.47:0,22,141	0/1:23,0:22:22.08:22,0,90	0/1:14,0:13:6.51:7,0,54	0/1:10,6:15:47:47,0,50	0/1:9,1:9:32.98:33,0,78	0/1:4,0:4:4.42:4,0,20	0/1:15,1:15:12.35:72,0,12	0/1:10,0:10:22.95:23,0,28	0/1:25,1:25:13.59:101,0,14	0/1:12,0:8:13.41:13,0,14	0/1:20,0:16:39.31:55,0,39	0/1:28,0:28:50.23:108,0,50	0/1:7,0:7:0.56:1,0,8	0/0:21,1:20:15.32:0,15,178	0/1:16,1:17:22.75:23,0,102	0/1:21,2:18:52.42:52,0,70	1/1:11,0:11:29.87:242,30,0	0/1:21,0:20:50.75:81,0,51	0/1:20,0:19:42.83:43,0,59	0/1:12,1:11:26.07:26,0,33
chr10	77327805	.	TC	T	3638.55	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=9.528;DP=544;FS=8.526;HRun=1;HaplotypeScore=83.4993;InbreedingCoeff=0.8265;MQ=45.72;MQ0=30;MQRankSum=-8.399;QD=10.22;ReadPosRankSum=-4.702;VQSLOD=-0.6301;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:43:72.15:0,72,1013	1/1:11,1:11:21.84:122,22,0	0/1:22,0:6:7.62:8,0,12	0/0:26,1:6:4.14:0,4,16	1/1:5,24:25:11.89:82,12,0	1/1:12,0:11:17.23:111,17,0	1/1:12,0:9:18.55:112,19,0	1/1:27,0:27:57.96:393,58,0	0/0:20,0:20:42.02:0,42,428	1/1:22,1:22:47.99:390,48,0	1/1:17,0:15:15.87:123,16,0	0/0:16,0:15:18.28:0,18,234	0/0:14,0:13:1.75:0,2,285	1/1:4,0:4:9.19:61,9,0	1/1:19,0:17:32.38:183,32,0	1/1:10,0:10:18.98:117,19,0	1/1:29,0:27:47.71:303,48,0	1/1:13,0:9:19.85:107,20,0	1/1:21,0:18:38.80:284,39,0	1/1:32,0:30:56.92:356,57,0	1/1:6,0:6:14.58:91,15,0	0/0:23,0:21:39.64:0,40,429	0/0:18,0:18:46.17:0,46,436	0/0:24,0:19:34.44:0,34,366	1/1:10,0:10:26.88:218,27,0	1/1:22,0:20:44.24:309,44,0	1/1:22,1:21:5.65:163,6,0	1/1:13,0:11:13.22:107,13,0
chr10	77328416	.	AT	A	4914.06	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=12.338;DP=421;FS=3.098;HRun=10;HaplotypeScore=62.8373;InbreedingCoeff=0.9406;MQ=78.98;MQ0=5;MQRankSum=-1.327;QD=20.48;ReadPosRankSum=0.772;VQSLOD=5.9245;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1108	1/1:1,5:6:14.99:129,15,0	0/0:25,0:9:11.86:0,12,95	0/0:19,0:15:10.73:0,11,112	0/0:13,0:13:33:0,33,345	1/1:2,13:15:32.99:284,33,0	1/1:1,11:12:26.99:232,27,0	1/1:5,13:19:46.78:367,47,0	0/0:12,0:12:27.04:0,27,276	1/1:2,16:18:47.62:378,48,0	1/1:0,14:15:41.99:362,42,0	0/0:14,0:14:33.09:0,33,363	0/0:10,0:10:27.04:0,27,279	1/1:2,4:6:14.98:127,15,0	1/1:7,11:19:40.64:314,41,0	1/1:3,9:12:29.36:241,29,0	1/1:3,21:24:68.16:563,68,0	1/1:4,9:13:32.23:253,32,0	1/1:2,16:18:47.57:393,48,0	1/1:1,7:8:21:181,21,0	1/1:3,14:17:41.43:342,41,0	0/0:13,0:13:29.96:0,30,301	0/0:11,0:11:24.05:0,24,254	0/0:12,1:13:1.03:0,1,238	0/0:14,0:14:42.11:0,42,455	1/1:2,18:21:59.67:501,60,0	1/1:2,11:13:20.99:181,21,0	1/1:1,3:4:8.79:65,9,0
chr10	77328815	.	AG	A	1638.22	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=0.903;DP=293;FS=9.035;HRun=1;HaplotypeScore=83.0245;InbreedingCoeff=0.5753;MQ=69.75;MQ0=21;MQRankSum=-6.545;QD=9.31;ReadPosRankSum=-1.076;VQSLOD=0.1511;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,3:29:24.57:0,25,482	1/1:5,0:5:6.70:32,7,0	0/0:41,0:18:15.43:0,15,113	0/0:46,1:17:1.40:0,1,69	1/1:15,0:16:26.45:156,26,0	1/1:9,0:9:16.91:69,17,0	1/1:7,0:6:7.39:27,7,0	1/1:7,0:5:8.87:37,9,0	1/1:8,0:8:18.18:126,18,0	1/1:11,0:11:21.29:107,21,0	1/1:7,0:7:9.62:39,10,0	1/1:3,1:5:11.89:82,12,0	1/1:9,0:9:26.70:222,27,0	1/1:5,0:5:11.92:63,12,0	1/1:5,0:5:9.29:55,9,0	1/1:2,0:2:3.46:24,3,0	1/1:14,0:12:17.02:78,17,0	1/1:3,0:3:3.74:9,4,0	1/1:10,0:7:7.16:79,7,0	1/1:1,0:1:3.01:31,3,0	./.	1/1:3,0:3:9:79,9,0	1/1:0,5:5:8.59:48,9,0	1/1:8,0:7:8.43:46,8,0	1/1:6,0:6:12.08:79,12,0	1/1:13,0:14:28.46:169,28,0	1/1:8,0:9:17.43:96,17,0	1/1:7,0:5:7.20:23,7,0
chr10	77328828	.	G	GCATTCAATAACCA	12461.84	PASS	AB=0.864;AC=30;AF=0.556;AN=54;BaseQRankSum=6.053;DP=239;FS=5.380;HRun=0;HaplotypeScore=148.1080;InbreedingCoeff=0.7346;MQ=95.22;MQ0=6;MQRankSum=-10.204;QD=157.74;ReadPosRankSum=4.062;VQSLOD=5.8123;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.26:0,75,3140	0/1:3,0:3:99:372,0,114	0/0:34,0:23:50.19:0,50,1023	0/0:37,0:21:37.70:0,38,882	0/0:15,0:15:36.12:0,36,1333	1/1:3,3:6:18.06:925,18,0	1/1:3,0:3:6.02:248,6,0	1/1:3,0:3:9:265,9,0	0/0:7,0:8:24.08:0,24,836	1/1:3,3:6:15.05:998,15,0	1/1:5,2:7:21.07:1292,21,0	0/0:4,0:4:12.04:0,12,470	0/0:11,0:11:33.11:0,33,1254	0/1:5,3:8:89.26:1165,0,89	1/1:4,1:5:15.05:898,15,0	1/1:1,1:2:6.02:312,6,0	1/1:4,4:8:20.95:1269,21,0	1/1:1,0:1:3.01:137,3,0	1/1:2,3:5:15.05:986,15,0	1/1:3,1:4:12.04:576,12,0	./.	0/0:6,0:6:18.06:0,18,685	0/0:4,0:4:9.03:0,9,359	0/0:5,0:4:9.03:0,9,288	0/0:9,0:9:24.08:0,24,806	1/1:3,8:11:33.11:1936,33,0	1/1:5,0:5:15.05:724,15,0	1/1:0,0:2:6.02:359,6,0
chr10	77328836	.	C	CA	1898.46	PASS	AB=0.675;AC=30;AF=0.556;AN=54;BaseQRankSum=2.287;DP=243;FS=13.787;HRun=7;HaplotypeScore=85.4204;InbreedingCoeff=0.5588;MQ=94.03;MQ0=4;MQRankSum=-8.916;QD=16.09;ReadPosRankSum=1.996;VQSLOD=2.3937;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.12:0,81,776	0/1:1,2:3:22.93:30,0,23	0/1:24,0:21:16.61:17,0,216	0/0:30,0:19:25.98:0,26,216	0/0:16,0:16:44.43:0,44,411	1/1:3,6:9:12.04:140,12,0	1/1:0,3:3:3.01:36,3,0	1/1:0,5:5:15.05:181,15,0	0/0:9,0:9:24.01:0,24,225	1/1:3,6:9:18.06:218,18,0	1/1:0,7:7:6.02:68,6,0	0/0:4,0:4:12.01:0,12,110	0/0:10,0:10:30.05:0,30,290	0/1:1,8:9:13.93:130,0,14	1/1:0,5:5:6.02:72,6,0	1/1:0,2:2:3.01:36,3,0	1/1:1,7:8:14.26:152,14,0	1/1:0,1:1:3.01:36,3,0	1/1:0,9:9:27.06:311,27,0	0/1:1,3:4:22.93:30,0,23	./.	0/0:7,0:7:21.03:0,21,199	0/0:4,0:4:9.01:0,9,84	0/0:8,0:7:11.96:0,12,106	0/0:9,0:9:27.03:0,27,255	1/1:1,10:11:33.09:388,33,0	1/1:2,5:7:18.02:196,18,0	1/1:0,2:2:5.95:54,6,0
chr10	77329358	.	CTG	C	11251.62	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=11.378;DP=663;FS=7.727;HRun=0;HaplotypeScore=103.6792;InbreedingCoeff=0.9824;MQ=70.89;MQ0=1;MQRankSum=-0.803;QD=29.92;ReadPosRankSum=1.589;VQSLOD=6.2877;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,111,1852	1/1:1,5:6:15.05:191,15,0	0/0:24,0:21:48.15:0,48,731	0/0:32,1:32:9.25:0,9,818	0/0:31,0:31:81.26:0,81,1322	1/1:2,14:16:42.12:516,42,0	1/1:3,13:16:45.14:572,45,0	1/1:8,25:33:75.23:943,75,0	0/0:31,0:31:78.24:0,78,1254	1/1:8,16:25:54.12:673,54,0	1/1:6,11:17:39.11:483,39,0	0/0:21,0:21:48.16:0,48,797	0/0:15,0:15:42.13:0,42,676	1/1:5,20:25:60.19:763,60,0	1/1:4,32:36:96.31:1216,96,0	1/1:2,23:25:72.23:916,72,0	1/1:4,23:27:66.21:840,66,0	1/1:4,16:20:51.16:648,51,0	1/1:10,7:17:24.08:303,24,0	1/1:1,12:13:36.12:458,36,0	1/1:16,31:47:93.27:1156,93,0	0/0:23,0:23:51.16:0,51,827	0/0:16,0:16:39.13:0,39,649	0/0:28,0:28:72.22:0,72,1178	0/0:17,1:18:9.96:0,10,712	1/1:4,14:18:42.13:535,42,0	1/1:5,17:22:54.16:673,54,0	1/1:4,9:13:30.06:365,30,0
chr10	77329409	.	TAGAA	T	13090.11	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=12.890;DP=565;FS=6.036;HRun=0;HaplotypeScore=125.7078;InbreedingCoeff=0.9813;MQ=83.40;MQ0=0;MQRankSum=-8.171;QD=39.67;ReadPosRankSum=2.548;VQSLOD=5.2356;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,2490	1/1:1,3:4:6.02:107,6,0	0/0:28,0:26:51.89:0,52,1122	0/0:21,0:21:46.37:0,46,909	0/0:16,0:16:39.08:0,39,891	1/1:1,15:16:39.13:694,39,0	1/1:2,23:25:60.19:1039,60,0	1/1:7,8:15:30.09:504,30,0	0/0:21,0:21:57.20:0,57,1460	1/1:6,19:25:66.22:1147,66,0	1/1:3,14:17:27.09:473,27,0	0/0:25,0:25:66.23:0,66,1703	0/0:15,0:15:42.14:0,42,1084	1/1:6,20:26:63.20:1093,63,0	1/1:8,32:40:93.31:1620,93,0	1/1:6,22:28:69.24:1228,69,0	1/1:5,20:25:60.21:1057,60,0	1/1:7,11:18:36.12:632,36,0	1/1:5,7:12:21.07:374,21,0	1/1:2,6:8:21.07:368,21,0	1/1:10,23:33:57.19:998,57,0	0/0:18,0:18:54.17:0,54,1341	0/0:16,0:16:42.13:0,42,1028	0/0:27,0:27:78.27:0,78,1976	0/0:12,0:12:36.12:0,36,904	1/1:4,16:20:57.19:981,57,0	1/1:2,10:12:30.10:514,30,0	1/1:2,4:6:15.05:261,15,0
chr10	77329498	.	TA	T	10295.84	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=11.690;DP=593;FS=1.396;HRun=5;HaplotypeScore=69.6911;InbreedingCoeff=0.9986;MQ=83.36;MQ0=0;MQRankSum=-3.685;QD=29.76;ReadPosRankSum=0.144;VQSLOD=5.2642;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,117,1570	1/1:2,7:9:21.06:238,21,0	0/0:26,0:26:71.90:0,72,945	0/0:11,0:11:27.09:0,27,365	0/0:21,0:21:63.21:0,63,862	1/1:2,16:18:45.13:511,45,0	1/1:1,23:24:63.18:715,63,0	1/1:1,22:23:66.17:736,66,0	0/0:20,0:20:57.12:0,57,726	1/1:3,23:26:69.20:783,69,0	1/1:3,19:22:57.16:647,57,0	0/0:19,0:19:51.17:0,51,697	0/0:12,0:12:30.10:0,30,410	1/1:1,17:18:51.14:578,51,0	1/1:5,20:25:60.17:679,60,0	1/1:2,23:25:66.19:748,66,0	1/1:2,25:27:66.19:748,66,0	1/1:1,17:18:51.14:578,51,0	1/1:1,13:14:39.11:442,39,0	1/1:0,19:19:54.15:612,54,0	1/1:3,19:22:57.16:646,57,0	0/0:27,0:27:69.23:0,69,943	0/0:21,0:21:54.18:0,54,738	0/0:27,0:27:78.26:0,78,1067	0/0:20,0:20:57.18:0,57,764	1/1:2,19:21:57.16:647,57,0	1/1:2,25:27:66.19:749,66,0	1/1:0,8:8:21.06:238,21,0
chr10	77330204	.	T	TC	13815.23	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=6.674;DP=512;FS=7.957;HRun=1;HaplotypeScore=67.9880;InbreedingCoeff=0.9766;MQ=80.68;MQ0=0;MQRankSum=-2.043;QD=43.58;ReadPosRankSum=3.054;VQSLOD=4.7098;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.28:0,93,1277	1/1:0,12:12:30.10:468,30,0	0/0:13,0:13:15.86:0,16,413	0/0:19,0:18:48.13:0,48,597	0/0:21,0:21:63.19:0,63,846	1/1:0,25:25:69.24:1102,69,0	1/1:0,18:17:48.16:767,48,0	1/1:0,24:24:72.24:1140,72,0	0/0:14,0:14:42.14:0,42,588	1/1:0,22:21:66.22:1050,66,0	1/1:1,15:16:39.13:624,39,0	0/0:10,0:10:27.06:0,27,356	0/0:7,0:7:21.07:0,21,294	1/1:0,15:15:36.12:576,36,0	1/1:4,16:20:45.15:719,45,0	1/1:1,20:21:57.19:911,57,0	1/1:0,20:20:54.18:862,54,0	1/1:0,14:14:42.14:671,42,0	1/1:0,15:15:45.15:711,45,0	1/1:0,19:19:57.19:911,57,0	1/1:0,16:16:39.13:624,39,0	0/0:26,0:26:75.23:0,75,1016	0/0:22,0:22:66.19:0,66,884	0/0:11,0:11:33.11:0,33,462	0/0:19,0:19:57.17:0,57,774	1/1:0,24:24:72.23:1119,72,0	1/1:1,26:27:75.26:1199,75,0	1/1:1,8:9:4.18:361,4,0
chr10	77330825	.	AC	A	993.16	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.238;DP=537;FS=0.781;HRun=3;HaplotypeScore=49.9026;InbreedingCoeff=0.9284;MQ=62.13;MQ0=0;MQRankSum=0.679;QD=30.10;ReadPosRankSum=1.260;VQSLOD=3.0180;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.31:0,96,1360	0/0:8,0:8:24.08:0,24,345	0/0:7,0:6:17.42:0,17,224	0/0:6,0:6:11.93:0,12,146	1/1:0,20:20:57.18:706,57,0	0/0:15,0:15:45.15:0,45,648	0/0:42,0:42:99:0,126,1758	0/0:23,0:23:60.17:0,60,813	0/0:21,0:21:60.20:0,60,864	0/0:19,0:19:57.19:0,57,821	0/0:15,0:15:45.15:0,45,646	0/0:19,0:19:54.18:0,54,778	0/0:17,0:17:48.16:0,48,691	0/0:15,0:15:42.14:0,42,604	0/0:15,0:15:45.15:0,45,648	0/0:15,0:15:45.15:0,45,648	0/0:33,0:33:93.29:0,93,1303	0/0:29,0:29:84.28:0,84,1210	0/0:30,0:30:78.25:0,78,1106	0/0:18,0:18:54.18:0,54,777	0/0:28,0:28:84.26:0,84,1185	0/0:12,0:12:36.12:0,36,517	0/0:16,0:16:42.14:0,42,605	0/0:22,0:22:63.19:0,63,888	1/1:1,12:13:33.10:409,33,0	0/0:28,0:28:81.27:0,81,1162	0/0:15,0:15:45.14:0,45,625	0/0:2,0:2:6.02:0,6,86
chr10	77331505	.	TAA	T	5429.69	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.602;DP=650;FS=0.792;HRun=2;HaplotypeScore=78.7070;InbreedingCoeff=0.9996;MQ=87.35;MQ0=1;MQRankSum=-1.796;QD=44.87;ReadPosRankSum=3.000;VQSLOD=4.8385;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,169,3399	0/0:8,0:8:24.08:0,24,475	0/0:23,0:24:66.23:0,66,1290	0/0:21,0:21:63.21:0,63,1195	0/0:19,0:19:57.20:0,57,1158	0/0:26,0:26:78.27:0,78,1585	0/0:23,0:23:69.23:0,69,1373	0/0:25,0:25:75.26:0,75,1501	1/1:0,22:22:60.20:979,60,0	0/0:28,0:28:84.28:0,84,1672	0/0:15,0:15:45.15:0,45,914	1/1:0,19:19:54.18:881,54,0	1/1:0,19:19:54.18:880,54,0	0/0:24,0:24:72.25:0,72,1463	0/0:17,0:17:51.18:0,51,1028	0/0:19,0:19:57.20:0,57,1149	0/0:30,0:30:90.31:0,90,1817	0/0:21,0:21:63.22:0,63,1280	0/0:20,0:20:60.21:0,60,1203	0/0:23,0:23:69.24:0,69,1402	0/0:33,0:33:99:0,99,1991	1/1:0,27:27:72.25:1174,72,0	1/1:0,15:15:39.13:635,39,0	1/1:0,19:18:54.18:881,54,0	0/0:33,0:32:99:0,99,1967	0/0:30,0:30:90.31:0,90,1825	0/0:20,0:20:60.16:0,60,1164	0/0:14,0:14:42.14:0,42,853
chr10	77331936	.	C	CTTTTCTTTTCTT	20289.55	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=3.561;DP=480;FS=28.112;HRun=0;HaplotypeScore=129.2788;InbreedingCoeff=0.6669;MQ=56.38;MQ0=1;MQRankSum=-6.861;QD=47.29;ReadPosRankSum=0.614;VQSLOD=2.5846;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.19:0,60,2021	1/1:0,0:9:6.02:322,6,0	0/0:15,0:10:26.40:0,26,540	0/0:15,0:13:16.96:0,17,498	1/1:25,0:23:47.61:1980,48,0	1/1:4,0:14:12.43:244,12,0	1/1:2,0:17:6.02:301,6,0	1/1:44,0:42:39.84:2853,40,0	1/1:0,0:12:3.01:157,3,0	1/1:6,0:24:51.32:1758,51,0	1/1:1,0:20:20.92:829,21,0	1/1:2,0:20:6.02:314,6,0	1/1:5,0:8:18.04:617,18,0	1/1:1,0:10:8.95:338,9,0	1/1:0,0:14:12.04:643,12,0	1/1:1,0:9:12.04:568,12,0	1/1:1,0:19:15.05:804,15,0	1/1:5,0:22:20.79:1034,21,0	1/1:3,0:21:58.40:2032,58,0	1/1:0,1:14:8.96:258,9,0	1/1:3,0:9:6.02:278,6,0	1/1:0,0:18:8.94:332,9,0	1/1:5,0:26:9.37:195,9,0	1/1:1,0:5:6.02:297,6,0	1/1:20,0:19:39.08:1618,39,0	1/1:2,0:19:24.18:1727,24,0	1/1:2,0:19:5.71:309,6,0	1/1:1,0:9:9.03:483,9,0
chr10	77331940	.	T	TC	1263.88	PASS	AB=0.922;AC=31;AF=0.554;AN=56;BaseQRankSum=3.765;DP=320;FS=16.577;HRun=0;HaplotypeScore=78.8841;InbreedingCoeff=-0.0653;MQ=55.64;MQ0=0;MQRankSum=-4.391;QD=4.84;ReadPosRankSum=4.550;VQSLOD=2.0531;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.19:0,63,848	0/1:8,0:8:9.94:10,0,15	0/0:14,0:10:26.16:0,26,299	0/0:12,0:10:18.57:0,19,265	0/1:10,13:21:65.44:163,0,65	0/0:9,0:9:1.41:0,1,51	1/1:9,0:8:2.74:12,3,0	0/1:22,22:41:99:668,0,249	1/1:7,0:7:2.60:10,3,0	0/1:11,0:11:25.74:26,0,111	1/1:7,0:7:12.69:48,13,0	1/1:9,0:9:5.19:20,5,0	1/1:5,3:8:4.17:100,4,0	0/1:5,0:5:11.68:12,0,26	1/1:8,0:8:10.39:40,10,0	0/1:8,0:8:1.67:23,0,2	0/1:14,0:14:9.84:34,0,10	0/1:14,1:15:36.56:37,0,44	0/1:10,0:10:4.59:5,0,116	0/1:10,0:10:1.61:2,0,31	0/1:3,0:3:4.87:5,0,6	1/1:9,0:9:5.19:20,5,0	0/1:10,0:10:1.59:2,0,31	0/0:3,0:3:2.83:0,3,14	0/1:5,12:16:22.85:144,0,23	0/1:10,0:10:10.26:10,0,70	0/1:10,0:10:3.15:3,0,23	1/1:6,0:6:7.79:30,8,0
chr10	77332214	.	AAAG	A	5100.87	PASS	AB=0.900;AC=13;AF=0.232;AN=56;BaseQRankSum=12.819;DP=591;FS=13.898;HRun=0;HaplotypeScore=84.5563;InbreedingCoeff=0.9316;MQ=72.75;MQ0=0;MQRankSum=1.457;QD=34.23;ReadPosRankSum=3.001;VQSLOD=4.3254;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.27:0,78,1680	0/0:14,0:14:42.13:0,42,885	0/0:16,0:16:34.83:0,35,809	0/0:12,0:12:32.98:0,33,635	0/0:27,0:27:60.19:0,60,1251	0/0:21,0:21:63.22:0,63,1374	0/0:18,0:18:54.19:0,54,1178	0/0:25,0:25:63.22:0,63,1370	1/1:0,21:21:63.21:1001,63,0	0/0:28,0:28:84.27:0,84,1739	0/0:20,0:20:54.12:0,54,1113	1/1:1,17:18:36.12:579,36,0	1/1:1,21:22:57.19:915,57,0	0/0:24,0:24:63.22:0,63,1373	0/0:24,0:24:72.18:0,72,1541	0/1:16,2:18:3.04:3,0,801	0/0:32,0:32:93.26:0,93,1987	0/0:17,0:17:48.16:0,48,1031	0/0:15,0:15:39.13:0,39,842	0/0:13,0:13:36.12:0,36,780	0/0:27,0:27:78.27:0,78,1720	1/1:1,18:18:48.08:703,48,0	1/1:1,23:24:63.17:984,63,0	1/1:2,25:27:57.13:916,57,0	0/0:26,0:26:72.23:0,72,1545	0/0:31,0:31:90.31:0,90,1966	0/0:15,0:15:42.14:0,42,927	0/0:10,0:10:30.09:0,30,617
chr10	77332961	.	C	CCAA	3838.48	PASS	AB=0.816;AC=6;AF=0.107;AN=56;BaseQRankSum=12.525;DP=954;FS=0.455;HRun=0;HaplotypeScore=234.3240;InbreedingCoeff=-0.1200;MQ=64.09;MQ0=0;MQRankSum=-12.163;QD=18.54;ReadPosRankSum=-2.038;VQSLOD=2.9665;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,2429	0/0:16,0:16:45.15:0,45,828	0/0:28,0:26:63.39:0,63,1092	0/0:37,0:30:78.40:0,78,1322	0/0:27,0:27:75.21:0,75,1286	0/0:22,0:22:65.96:0,66,1009	0/0:41,0:41:99:0,114,2068	0/0:33,0:33:60.03:0,60,1660	0/1:26,16:39:99:958,0,623	0/0:45,0:45:99:0,129,2253	0/0:21,0:21:57.18:0,57,1014	0/1:29,14:43:99:1569,0,674	0/1:25,16:40:99:865,0,933	0/0:41,0:41:99:0,120,2149	0/0:42,0:42:99:0,123,2247	0/0:30,0:30:90.29:0,90,1636	0/0:32,0:32:93.30:0,93,1698	0/0:47,0:47:99:0,141,2489	0/0:19,0:19:45.19:0,45,929	0/0:16,0:16:42.59:0,43,704	0/0:92,0:91:99:0,265,4754	0/1:28,1:29:99:164,0,856	0/1:16,7:23:99:169,0,497	0/1:28,1:27:99:113,0,1001	0/0:26,0:26:78.23:0,78,1380	0/0:41,0:41:99:0,120,2008	0/0:25,0:25:75.22:0,75,1305	0/0:20,0:20:57.20:0,57,1034
chr10	77333939	.	G	GACA	7952.78	PASS	AB=0.845;AC=22;AF=0.393;AN=56;BaseQRankSum=15.504;DP=734;FS=5.829;HRun=0;HaplotypeScore=264.7344;InbreedingCoeff=-0.6265;MQ=48.19;MQ0=1;MQRankSum=-13.947;QD=14.28;ReadPosRankSum=6.456;VQSLOD=3.8048;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:93.22:0,93,1588	0/1:9,5:14:99:305,0,208	0/0:24,0:15:41.58:0,42,524	0/0:25,0:20:24.90:0,25,572	0/1:17,5:22:1.91:2,0,419	0/1:21,8:29:99:614,0,651	0/0:26,0:26:24.07:0,24,415	0/1:16,8:24:99:530,0,592	0/1:35,7:42:99:730,0,515	0/1:32,2:34:99:489,0,678	0/1:14,2:16:4.97:5,0,196	0/1:37,9:46:99:693,0,1203	0/1:33,4:37:71.26:554,0,71	0/1:27,8:35:99:649,0,757	0/1:26,8:34:99:605,0,708	0/1:22,5:27:99:418,0,652	0/1:15,4:19:99:185,0,441	0/1:13,0:13:99:101,0,133	0/1:14,1:13:68.30:68,0,380	0/1:23,1:24:47.80:48,0,330	0/0:46,1:46:38.54:0,39,662	0/1:21,8:28:99:413,0,718	0/1:11,7:18:93.84:94,0,362	0/0:20,0:20:6.12:0,6,365	0/1:18,4:22:99:322,0,159	0/1:26,4:30:99:711,0,462	0/1:19,4:23:99:340,0,343	0/1:3,1:4:74.85:75,0,99
chr10	77333940	.	T	TCAGTGGTGGACAA	44675.98	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-1.909;DP=804;FS=5.780;HRun=0;HaplotypeScore=317.2434;InbreedingCoeff=0.8719;MQ=46.61;MQ0=2;MQRankSum=-8.425;QD=61.71;ReadPosRankSum=0.827;VQSLOD=3.2902;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:74.72:0,75,2348	1/1:11,3:14:39.10:1445,39,0	0/0:23,0:14:27.07:0,27,460	0/0:25,0:20:20.75:0,21,543	1/1:22,4:26:14.89:278,15,0	1/1:26,5:31:60.15:2201,60,0	1/1:9,19:29:2.96:23,3,0	1/1:27,0:27:57.19:1615,57,0	1/1:32,16:50:99:5834,135,0	1/1:16,23:43:90.23:3465,90,0	1/1:7,10:17:8.99:93,9,0	1/1:38,8:46:99:4089,102,0	1/1:14,23:40:68.78:3396,69,0	1/1:30,8:38:99:3848,99,0	1/1:30,8:39:84.20:3320,84,0	1/1:24,7:31:81.14:2908,81,0	1/1:18,2:20:32.90:1277,33,0	1/1:4,10:14:12.04:741,12,0	1/1:17,2:16:21.98:837,22,0	1/1:5,20:26:15.05:497,15,0	1/1:22,29:53:18.05:348,18,0	1/1:23,6:28:38.81:1060,39,0	1/1:22,1:23:20.08:286,20,0	1/1:18,2:20:14.96:224,15,0	1/1:10,14:24:21.07:1014,21,0	1/1:12,23:38:87.04:3201,87,0	1/1:16,4:22:48.12:2275,48,0	1/1:3,1:4:9.03:399,9,0
chr10	77333949	.	G	GACA	7158.21	PASS	AB=0.937;AC=23;AF=0.411;AN=56;BaseQRankSum=-4.389;DP=780;FS=0.328;HRun=0;HaplotypeScore=354.0996;InbreedingCoeff=-0.6969;MQ=45.71;MQ0=2;MQRankSum=-1.883;QD=11.42;ReadPosRankSum=6.126;VQSLOD=3.1541;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:86.06:0,86,1345	0/1:14,1:15:99:282,0,168	0/0:20,0:13:19.81:0,20,408	0/0:24,0:18:42.35:0,42,462	0/1:23,0:23:25:25,0,138	0/1:26,3:29:99:338,0,540	0/0:29,0:29:17.91:0,18,187	0/1:27,1:28:99:147,0,611	0/1:46,5:51:99:948,0,641	0/1:45,0:45:99:634,0,791	0/1:16,0:16:0.03:0,0,147	0/1:37,7:44:99:855,0,322	0/1:35,0:35:99:452,0,272	0/1:39,4:43:99:716,0,384	0/1:30,5:35:99:542,0,418	0/1:28,5:33:99:615,0,382	0/1:15,1:16:99:215,0,120	0/1:14,0:14:50.77:51,0,171	0/1:18,1:17:99:145,0,302	0/1:24,0:23:53.08:53,0,137	0/0:50,0:49:0.41:0,0,69	0/1:25,2:26:81.04:81,0,262	0/1:23,1:24:36.82:37,0,372	0/1:18,2:20:51.01:147,0,51	0/1:23,0:23:82.74:83,0,179	0/1:41,0:41:99:359,0,1000	0/1:16,3:19:99:339,0,246	0/1:2,1:3:29.01:94,0,29
chr10	77333971	.	G	GGGCAGTAGTGGAC	22461.45	PASS	AB=0.984;AC=24;AF=0.429;AN=56;BaseQRankSum=-7.227;DP=771;FS=11.185;HRun=0;HaplotypeScore=404.6457;InbreedingCoeff=-0.7275;MQ=47.50;MQ0=2;MQRankSum=-8.262;QD=33.42;ReadPosRankSum=0.499;VQSLOD=1.8818;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:84.23:0,84,2149	0/1:13,0:13:62.58:295,0,63	0/0:19,0:17:27.93:0,28,556	0/0:16,0:13:15.07:0,15,328	0/0:26,0:26:12.03:0,12,164	0/1:26,0:26:99:1210,0,106	0/1:28,0:27:79.76:698,0,80	0/1:30,0:30:99:664,0,257	0/1:47,0:47:99:2449,0,159	0/1:40,0:40:99:1717,0,158	0/1:14,0:14:5.07:246,0,5	0/1:41,0:41:95.63:1835,0,96	0/1:34,0:34:99:1356,0,101	0/1:44,0:44:71.68:2273,0,72	0/1:36,0:36:94.59:1923,0,95	0/1:32,0:32:35.63:1669,0,36	0/1:13,0:13:66.90:107,0,67	0/1:14,0:14:34.45:625,0,34	0/1:19,0:16:71.90:716,0,72	0/1:24,0:23:48.40:445,0,48	0/1:41,0:40:99:359,0,130	0/1:39,0:38:65.37:348,0,65	0/1:26,0:27:21.75:253,0,22	0/1:7,6:20:11.98:150,0,12	0/1:20,0:20:99:522,0,207	0/1:39,0:39:69.32:1844,0,69	0/1:23,0:23:94.84:492,0,95	0/1:8,0:8:25.96:265,0,26
chr10	77333973	.	G	GCAGTAGTGGACAC	37651.68	PASS	AB=0.752;AC=48;AF=0.857;AN=56;BaseQRankSum=1.004;DP=888;FS=6.961;HRun=0;HaplotypeScore=402.8546;InbreedingCoeff=0.7010;MQ=46.29;MQ0=2;MQRankSum=-8.583;QD=46.31;ReadPosRankSum=3.658;VQSLOD=3.4431;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:88.41:0,88,2311	1/1:8,6:16:26.43:537,26,0	0/0:19,0:17:7.05:0,7,480	0/0:17,0:14:16.99:0,17,231	0/1:13,0:28:5.42:5,0,70	1/1:16,11:30:59.39:1921,59,0	1/1:28,3:30:56.68:1251,57,0	1/1:35,0:35:83.86:1815,84,0	1/1:35,19:57:99:4025,113,0	1/1:40,2:43:93.88:2919,94,0	1/1:15,1:16:17.99:431,18,0	1/1:25,17:47:82.45:2676,82,0	1/1:34,1:36:83.73:2345,84,0	1/1:21,23:46:86.51:3166,87,0	1/1:20,19:40:80.53:2889,81,0	1/1:18,18:40:62.66:2406,63,0	1/1:11,3:18:26.84:439,27,0	1/1:13,4:17:33:1170,33,0	1/1:13,12:23:60.09:1768,60,0	1/1:25,2:26:26.64:726,27,0	1/1:45,6:50:29.20:834,29,0	1/1:24,20:44:32.79:673,33,0	1/1:32,2:32:20.78:458,21,0	1/1:22,1:23:14.91:369,15,0	0/1:19,0:23:56.41:655,0,56	1/1:40,5:45:86.70:2954,87,0	1/1:14,10:31:37.84:830,38,0	1/1:2,6:8:11.95:389,12,0
chr10	77333998	.	AGTGGCAG	A	4144.76	PASS	AB=0.864;AC=18;AF=0.321;AN=56;BaseQRankSum=12.044;DP=828;FS=0.000;HRun=0;HaplotypeScore=299.1851;InbreedingCoeff=-0.4729;MQ=50.18;MQ0=2;MQRankSum=-13.141;QD=7.45;ReadPosRankSum=-1.756;VQSLOD=1.3966;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,4659	0/1:11,2:13:99:142,0,520	0/0:20,0:16:47.83:0,48,1496	0/0:28,0:18:53.33:0,53,1557	0/0:15,2:17:26.70:0,27,974	0/1:19,4:23:99:151,0,533	0/1:22,7:28:99:270,0,1789	0/1:25,6:31:99:478,0,2759	0/1:40,5:45:99:295,0,2202	0/1:31,8:39:99:592,0,2753	0/1:13,3:16:99:150,0,981	0/1:36,7:43:99:350,0,2070	0/1:29,5:34:99:213,0,2992	0/1:36,6:42:99:274,0,1921	0/1:42,3:45:99:231,0,2964	0/1:38,3:41:99:166,0,2093	0/1:12,3:15:58.80:59,0,743	0/0:17,0:17:16.94:0,17,1372	0/1:26,1:25:23.64:24,0,2023	0/0:22,3:25:31.48:0,31,2102	0/0:43,5:47:7.81:0,8,2896	0/0:26,3:29:36.57:0,37,1189	0/1:16,9:22:6.02:6,0,908	0/0:36,0:36:47.29:0,47,2169	0/1:16,5:21:91.54:92,0,1423	0/1:31,8:39:99:583,0,2704	0/1:27,1:28:70.18:70,0,913	0/0:9,1:10:17.38:0,17,532
chr10	77334937	.	TACACAC	T	2172.48	PASS	AB=0.850;AC=39;AF=0.750;AN=52;BaseQRankSum=5.824;DP=399;FS=5.418;HRun=0;HaplotypeScore=88.3107;InbreedingCoeff=0.3834;MQ=62.25;MQ0=24;MQRankSum=-5.255;QD=8.39;ReadPosRankSum=1.239;VQSLOD=1.2962;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,1:29:21.07:0,21,571	./.	./.	0/0:38,0:14:0:0,0,0	0/0:14,0:13:24.08:0,24,638	0/1:7,9:15:16.95:55,0,17	1/1:8,2:10:3.01:61,3,0	0/1:35,0:34:4.95:100,0,5	1/1:6,0:11:18.06:251,18,0	1/1:13,0:14:15.04:197,15,0	1/1:4,6:11:3.89:39,4,0	1/1:5,0:5:3.01:42,3,0	1/1:0,0:7:15.05:209,15,0	1/1:3,0:3:3:25,3,0	1/1:4,3:8:9.03:164,9,0	1/1:4,2:8:6.02:122,6,0	1/1:17,8:26:1.59:130,2,0	1/1:10,3:12:8.47:135,8,0	1/1:7,0:7:1.30:23,1,0	1/1:9,4:12:9.03:183,9,0	0/1:17,2:19:0:0,0,0	1/1:5,0:10:9.03:126,9,0	1/1:6,0:10:8.98:125,9,0	0/0:6,0:9:0:0,0,0	0/0:9,0:9:15.05:0,15,463	1/1:4,3:7:9.01:142,9,0	1/1:5,2:7:6.02:122,6,0	1/1:8,1:10:3.01:61,3,0
chr10	77335030	.	TTA	T	1083.42	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.297;DP=306;FS=6.110;HRun=0;HaplotypeScore=45.9626;InbreedingCoeff=0.8724;MQ=70.90;MQ0=1;MQRankSum=-3.138;QD=36.11;ReadPosRankSum=-1.058;VQSLOD=4.8991;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:19:51.10:0,51,872	0/0:3,0:3:9.02:0,9,143	0/0:13,0:8:5.42:0,5,85	0/0:20,0:13:17.06:0,17,254	0/0:10,0:10:30.09:0,30,523	0/0:14,0:14:39.10:0,39,698	0/0:4,0:4:12.04:0,12,229	0/0:35,0:35:99:0,105,1915	1/1:0,12:12:36.12:534,36,0	0/0:9,0:9:27.09:0,27,478	0/0:8,0:8:21.07:0,21,381	1/1:0,5:5:15.05:222,15,0	1/1:0,3:3:9.03:132,9,0	0/0:5,0:5:15.05:0,15,287	0/0:5,0:5:12.04:0,12,232	0/0:8,0:7:21.07:0,21,382	0/0:27,0:27:78.07:0,78,1426	0/0:20,0:17:51:0,51,859	0/0:16,0:16:48.14:0,48,840	0/0:10,0:10:30.09:0,30,540	0/0:7,0:5:15.04:0,15,256	1/1:0,1:1:3.01:45,3,0	1/1:0,5:5:15.01:190,15,0	1/1:1,3:3:9.03:130,9,0	0/0:10,0:10:29.84:0,30,532	0/0:5,0:5:15.05:0,15,286	0/0:12,0:12:36.08:0,36,649	0/0:11,0:11:33.11:0,33,606
chr10	77336382	.	T	TA	587.92	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-0.738;DP=317;FS=4.136;HRun=9;HaplotypeScore=48.3804;InbreedingCoeff=0.7933;MQ=61.04;MQ0=7;MQRankSum=-2.303;QD=18.97;ReadPosRankSum=-2.693;VQSLOD=2.8283;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:53.98:0,54,469	0/0:2,0:2:6:0,6,52	0/0:12,0:5:5.79:0,6,52	0/0:10,0:8:11.01:0,11,68	0/0:15,0:15:38.98:0,39,338	0/0:10,0:11:17.01:0,17,136	0/0:9,0:9:23.99:0,24,208	0/0:30,0:29:56.27:0,56,471	1/1:3,8:11:27.07:298,27,0	0/0:9,0:9:26.98:0,27,231	0/0:5,0:5:15:0,15,130	1/1:1,2:3:3.01:33,3,0	1/1:1,3:4:6.02:66,6,0	0/0:5,0:5:12:0,12,104	0/0:12,0:12:23.99:0,24,208	0/0:7,0:7:11.99:0,12,104	0/0:21,0:21:59.99:0,60,521	0/0:31,0:31:71.97:0,72,624	0/0:21,0:21:62.99:0,63,547	0/0:5,0:5:12:0,12,104	0/0:2,0:2:6:0,6,52	1/1:0,1:1:3.01:33,3,0	1/1:5,2:7:21.05:220,21,0	1/1:1,4:4:9.02:99,9,0	0/0:15,0:14:23.98:0,24,204	0/0:19,0:19:50.97:0,51,439	0/0:15,0:15:32.99:0,33,286	0/0:7,0:6:14.99:0,15,130
chr10	77336400	.	T	TA	5310.57	PASS	AB=0.603;AC=43;AF=0.827;AN=52;BaseQRankSum=-3.679;DP=325;FS=18.035;HRun=10;HaplotypeScore=35.5067;InbreedingCoeff=0.4383;MQ=56.52;MQ0=4;MQRankSum=-0.804;QD=18.97;ReadPosRankSum=-1.558;VQSLOD=3.2070;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:53.89:0,54,438	1/1:1,2:3:6.02:64,6,0	0/0:10,0:4:5.82:0,6,49	0/0:10,0:6:2.81:0,3,24	1/1:3,1:19:15.64:173,16,0	0/1:4,7:10:3.62:160,0,4	1/1:1,7:8:21.05:224,21,0	1/1:10,23:29:35.46:565,35,0	1/1:5,4:9:15.03:153,15,0	0/1:4,5:9:6.32:133,0,6	1/1:2,7:9:21.05:224,21,0	./.	1/1:2,1:3:3.01:32,3,0	1/1:3,2:5:6:56,6,0	1/1:1,8:10:20.89:206,21,0	0/1:1,4:5:12.61:84,0,13	1/1:4,20:24:13.78:532,14,0	1/1:4,22:26:66.10:681,66,0	1/1:8,14:23:35.25:410,35,0	1/1:1,5:6:11.96:114,12,0	1/1:0,3:3:9.02:96,9,0	./.	1/1:1,4:5:9.02:96,9,0	1/1:4,6:8:11.99:116,12,0	1/1:2,0:15:19.89:100,20,0	1/1:3,21:24:57.09:594,57,0	1/1:2,9:11:21.01:212,21,0	1/1:0,9:9:27.07:288,27,0
chr10	77336583	.	TA	T	366.36	PASS	AB=1.000;AC=18;AF=0.333;AN=54;BaseQRankSum=0.145;DP=333;FS=3.539;HRun=16;HaplotypeScore=57.4461;InbreedingCoeff=0.4119;MQ=70.69;MQ0=3;MQRankSum=-0.313;QD=2.93;ReadPosRankSum=2.301;VQSLOD=-0.7181;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,2:28:11.54:0,12,277	0/0:2,0:2:0:0,0,0	0/0:29,0:10:2.67:0,3,42	0/0:20,1:15:6.54:0,7,44	1/1:3,10:14:29.31:179,29,0	0/0:16,0:16:7.44:0,7,52	0/0:9,0:9:2.03:0,2,5	0/1:15,0:14:4.64:5,0,37	1/1:6,4:10:11.68:72,12,0	0/0:18,0:18:13.66:0,14,72	0/0:9,0:8:11.34:0,11,68	1/1:4,1:4:2.83:18,3,0	1/1:3,5:8:8.49:53,8,0	0/0:8,0:8:3.58:0,4,9	0/1:7,0:7:0.41:0,0,1	0/0:7,0:6:1.23:0,1,20	0/1:21,0:21:4.07:4,0,39	0/1:18,0:18:14.80:15,0,22	0/0:17,0:17:3.81:0,4,49	0/0:4,0:4:4.73:0,5,23	0/0:5,0:4:2:0,2,12	./.	1/1:5,1:6:2.88:18,3,0	1/1:7,1:11:14.29:61,14,0	1/1:3,6:10:16.69:96,17,0	0/0:9,0:8:1.44:0,1,5	0/0:12,0:12:1.57:0,2,6	0/0:13,0:13:8.22:0,8,43
chr10	77336597	.	AAAG	A	2536.84	PASS	AC=32;AF=0.593;AN=54;BaseQRankSum=0.766;DP=377;FS=2.415;HRun=0;HaplotypeScore=67.5562;InbreedingCoeff=0.7983;MQ=75.28;MQ0=4;MQRankSum=-2.210;QD=11.48;ReadPosRankSum=-1.576;VQSLOD=2.7595;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:75.11:0,75,1049	0/0:2,0:2:2.50:0,2,9	0/0:31,0:15:0.31:0,0,137	0/0:24,0:17:5.17:0,5,136	0/0:20,0:20:41.99:0,42,394	1/1:19,2:21:16.14:280,16,0	1/1:10,0:10:5.54:25,6,0	1/1:13,3:15:33.31:331,33,0	0/0:9,0:9:21.01:0,21,193	1/1:12,2:14:28.05:203,28,0	1/1:12,0:11:8.56:72,9,0	0/0:5,0:4:5.22:0,5,34	0/0:7,0:7:11.04:0,11,85	1/1:9,0:9:11.58:74,12,0	1/1:4,9:13:11.44:83,11,0	1/1:9,2:10:23.46:199,23,0	1/1:24,3:27:48.74:431,49,0	1/1:17,1:18:23.28:209,23,0	1/1:14,3:17:29.61:315,30,0	1/1:4,0:4:2.74:12,3,0	1/1:8,0:7:11.93:93,12,0	./.	0/0:3,0:3:6.01:0,6,63	0/0:11,0:11:19.62:0,20,127	0/0:8,0:8:17.47:0,17,138	1/1:13,1:13:29.60:250,30,0	1/1:14,1:15:11.19:78,11,0	1/1:12,0:12:13.98:78,14,0
chr10	77336598	.	AAG	A	3591.20	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-0.054;DP=366;FS=0.000;HRun=0;HaplotypeScore=58.0490;InbreedingCoeff=0.7616;MQ=76.94;MQ0=4;MQRankSum=-4.987;QD=15.48;ReadPosRankSum=-1.376;VQSLOD=2.9911;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:78.49:0,78,830	1/1:1,1:2:2.04:6,2,0	0/0:31,0:16:6.56:0,7,173	0/0:24,0:17:12.16:0,12,128	0/0:17,0:17:42.02:0,42,260	1/1:18,3:21:43.23:391,43,0	1/1:0,10:10:6.02:73,6,0	1/1:14,2:15:22.22:283,22,0	0/0:8,0:8:20.52:0,21,131	1/1:10,4:14:19.31:318,19,0	1/1:3,9:11:11.95:103,12,0	0/0:5,0:4:8.08:0,8,47	0/0:7,0:7:10.37:0,10,48	1/1:2,7:9:12:130,12,0	1/1:11,2:13:12.02:131,12,0	1/1:9,2:10:23.95:214,24,0	1/1:24,3:27:61.37:529,61,0	1/1:16,2:18:44.84:349,45,0	1/1:15,2:17:33.40:281,33,0	1/1:0,4:4:5.97:55,6,0	1/1:8,0:7:13.75:87,14,0	1/1:1,0:1:0.47:1,0,0	0/0:2,0:2:5.90:0,6,41	0/1:10,0:10:6.17:6,0,44	0/0:7,0:7:5.11:0,5,60	1/1:11,3:13:33.01:309,33,0	1/1:2,13:15:11.82:133,12,0	1/1:2,8:10:18.01:191,18,0
chr10	77336599	.	AG	A	2952.60	PASS	AB=0.972;AC=42;AF=0.750;AN=56;BaseQRankSum=2.476;DP=355;FS=1.082;HRun=1;HaplotypeScore=54.9567;InbreedingCoeff=0.5825;MQ=77.96;MQ0=3;MQRankSum=-2.472;QD=10.11;ReadPosRankSum=-0.155;VQSLOD=1.2347;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:72.35:0,72,617	1/1:2,0:2:3:27,3,0	0/1:29,0:16:5.58:6,0,141	0/1:24,0:18:0.37:0,0,116	0/0:17,0:17:25.69:0,26,145	1/1:18,1:19:50.55:359,51,0	1/1:10,0:10:5.95:42,6,0	1/1:16,1:16:20.60:260,21,0	0/0:8,0:8:10.68:0,11,70	1/1:13,1:14:19.32:252,19,0	1/1:10,1:10:11.26:68,11,0	0/0:5,0:4:7.63:0,8,54	1/1:7,0:7:1.66:10,2,0	1/1:7,1:8:11.90:84,12,0	1/1:11,2:13:11.87:80,12,0	1/1:10,1:11:26.78:196,27,0	1/1:23,3:26:64.45:467,64,0	1/1:13,3:16:46.07:382,46,0	1/1:17,1:18:37.43:270,37,0	1/1:4,0:4:5.93:40,6,0	1/1:7,2:8:16.44:108,16,0	1/1:1,0:1:0.89:2,1,0	0/0:2,0:2:4.24:0,4,27	0/1:7,1:8:1.15:1,0,44	0/1:7,0:7:8.05:8,0,11	1/1:13,0:12:32.89:272,33,0	1/1:14,1:15:11.87:81,12,0	1/1:9,0:9:17.18:109,17,0
chr10	77336916	.	T	TA	2040.07	PASS	AB=0.600;AC=11;AF=0.196;AN=56;BaseQRankSum=-8.128;DP=565;FS=0.000;HRun=9;HaplotypeScore=60.4919;InbreedingCoeff=0.9118;MQ=76.95;MQ0=0;MQRankSum=-2.757;QD=21.25;ReadPosRankSum=1.977;VQSLOD=4.3709;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,1038	0/0:3,0:3:9:0,9,78	0/0:21,0:18:20.89:0,21,233	0/0:15,0:15:23.05:0,23,168	0/0:26,0:26:68.98:0,69,599	0/0:16,0:16:38.95:0,39,331	0/0:18,0:18:50.99:0,51,442	0/0:34,0:34:86.75:0,87,752	1/1:2,16:18:19.07:439,19,0	0/0:26,0:26:59.94:0,60,518	0/0:24,0:25:74.02:0,74,631	1/1:4,13:17:30.08:332,30,0	1/1:3,14:17:13.05:372,13,0	0/0:16,0:16:44.97:0,45,387	0/0:21,0:21:59.95:0,60,513	0/0:16,0:16:29.96:0,30,260	0/0:34,0:34:92.92:0,93,794	0/0:20,0:20:53.96:0,54,465	0/0:24,0:25:52.96:0,53,439	0/0:17,0:17:41.94:0,42,355	0/0:9,0:9:26.99:0,27,234	1/1:0,12:13:32.90:335,33,0	0/1:4,8:12:1.98:208,0,2	1/1:2,17:19:48.13:531,48,0	0/0:16,0:16:38.96:0,39,334	0/0:25,0:25:68.97:0,69,597	0/0:33,0:33:89.98:0,90,781	0/0:9,0:9:26.99:0,27,234
chr10	77337377	.	CT	C	1542.61	PASS	AB=0.824;AC=17;AF=0.304;AN=56;BaseQRankSum=10.469;DP=470;FS=1.006;HRun=11;HaplotypeScore=54.9576;InbreedingCoeff=0.8597;MQ=58.82;MQ0=10;MQRankSum=3.361;QD=12.64;ReadPosRankSum=2.533;VQSLOD=3.4589;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,1:35:65.78:0,66,678	0/0:6,0:6:12.03:0,12,127	0/0:11,0:9:3.01:0,3,31	0/0:13,0:7:7.95:0,8,99	1/1:1,14:17:45.87:346,46,0	0/0:16,0:16:36.09:0,36,382	0/0:13,0:13:30.08:0,30,320	0/0:27,1:26:38.46:0,38,593	1/1:2,12:13:32.96:270,33,0	0/0:12,0:12:27.03:0,27,265	0/0:14,0:14:39.06:0,39,388	1/1:4,11:16:23.97:197,24,0	1/1:1,10:9:23.97:197,24,0	0/0:15,0:15:33.04:0,33,340	0/0:20,0:19:39.08:0,39,408	0/0:13,0:13:33.08:0,33,350	0/0:33,0:32:72.06:0,72,723	0/0:18,0:15:36.09:0,36,382	0/0:27,1:27:11.02:0,11,517	0/0:18,0:20:44.86:0,45,430	0/0:18,0:18:30.08:0,30,320	1/1:3,5:7:17.97:146,18,0	1/1:2,9:11:17.97:148,18,0	1/1:2,10:12:20.97:172,21,0	1/1:5,14:19:29.88:241,30,0	0/1:11,3:14:31.73:32,0,301	0/0:18,0:17:30.04:0,30,307	0/0:13,1:14:14.45:0,14,359
chr10	77337583	.	CTTT	C	4214.59	PASS	AB=0.665;AC=47;AF=0.839;AN=56;BaseQRankSum=1.049;DP=470;FS=5.920;HRun=16;HaplotypeScore=67.2660;InbreedingCoeff=0.4002;MQ=60.57;MQ0=16;MQRankSum=0.254;QD=10.83;ReadPosRankSum=2.982;VQSLOD=1.4680;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:30:22.67:0,23,764	1/1:4,3:7:5.91:64,6,0	0/0:26,0:9:9.09:0,9,90	0/0:21,0:4:0:0,0,0	1/1:7,15:22:2.76:233,3,0	1/1:2,12:14:11.89:114,12,0	1/1:5,9:15:19.41:223,19,0	0/1:11,7:18:37.15:117,0,37	1/1:1,0:8:8.80:53,9,0	1/1:9,7:16:23.78:244,24,0	1/1:2,8:10:8.64:97,9,0	1/1:2,0:7:11.70:69,12,0	1/1:5,1:13:20.57:138,21,0	1/1:1,6:8:7.35:79,7,0	1/1:2,18:19:29.47:322,29,0	1/1:7,13:20:29.80:321,30,0	1/1:7,17:27:37.35:388,37,0	1/1:12,11:21:11.87:129,12,0	1/1:7,6:16:22.18:216,22,0	1/1:10,6:16:8.45:96,8,0	0/1:3,3:5:20.55:85,0,21	1/1:10,0:15:11.42:83,11,0	1/1:3,0:14:20.47:123,20,0	1/1:8,0:20:29.39:191,29,0	0/1:6,9:15:2.45:173,0,2	1/1:12,7:19:20.61:226,21,0	1/1:8,10:17:29.42:302,29,0	1/1:4,4:8:11.97:129,12,0
chr10	77338061	.	TTAAAA	T	333.40	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=1.640;DP=382;FS=12.356;HRun=0;HaplotypeScore=101.5502;InbreedingCoeff=0.8332;MQ=72.35;MQ0=1;MQRankSum=-2.829;QD=15.15;ReadPosRankSum=0.002;VQSLOD=1.9119;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.11:0,72,1867	0/0:6,0:6:15.04:0,15,281	0/0:24,0:16:24.77:0,25,546	0/0:27,0:17:29.97:0,30,494	0/0:17,0:17:30.09:0,30,689	0/0:20,0:20:21.06:0,21,436	0/0:15,0:15:27.03:0,27,537	0/0:24,0:24:48.14:0,48,929	1/1:5,3:8:15.04:249,15,0	0/0:25,0:25:54.14:0,54,898	0/0:12,0:12:21.07:0,21,507	./.	./.	0/0:15,0:15:33.11:0,33,747	0/0:13,0:13:12.04:0,12,302	0/0:7,0:7:21.04:0,21,386	0/0:23,0:23:27.07:0,27,578	0/0:13,0:13:14.95:0,15,246	0/0:12,0:12:21.07:0,21,493	0/0:22,0:22:47.63:0,48,879	0/0:12,0:12:15.02:0,15,239	1/1:2,3:5:8.86:90,9,0	1/1:2,2:4:2.92:17,3,0	1/1:3,2:5:6.02:111,6,0	0/0:9,0:9:24.08:0,24,479	0/0:20,0:20:50.59:0,51,927	0/0:14,0:14:17.16:0,17,349	0/0:2,0:2:5.94:0,6,41
chr10	77338079	.	A	AG	156.18	PASS	AB=0.926;AC=12;AF=0.231;AN=52;BaseQRankSum=4.184;DP=403;FS=0.000;HRun=0;HaplotypeScore=79.1556;InbreedingCoeff=0.2931;MQ=58.95;MQ0=24;MQRankSum=-4.455;QD=1.90;ReadPosRankSum=-2.436;VQSLOD=1.8060;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.20:0,60,837	0/0:6,0:6:15.04:0,15,182	0/0:50,0:16:29.70:0,30,440	0/0:37,0:12:23.57:0,24,298	0/0:14,0:13:17.13:0,17,365	0/0:22,0:20:26.90:0,27,306	0/0:10,0:10:27.09:0,27,377	0/0:28,0:26:63.08:0,63,787	1/1:5,1:5:14.86:120,15,0	0/0:23,0:22:63.20:0,63,866	0/0:9,0:9:21.07:0,21,293	./.	./.	0/0:13,0:13:39.13:0,39,536	0/0:13,0:13:12.04:0,12,162	0/1:7,1:8:16:16,0,252	0/0:20,0:18:33.09:0,33,420	0/1:15,0:15:6.13:6,0,164	0/1:13,0:11:0.35:0,0,287	0/0:21,0:21:52:0,52,654	0/0:14,0:13:18.06:0,18,250	0/1:7,0:7:36.01:36,0,68	1/1:5,0:4:2.92:17,3,0	1/1:4,0:3:5.78:44,6,0	0/0:11,0:11:30.10:0,30,424	0/1:20,0:20:4.33:4,0,650	0/0:8,1:9:2.52:0,3,308	0/1:2,2:4:28.85:54,0,29
chr10	77338086	.	AAGGAGG	A	2378.11	PASS	AB=0.928;AC=21;AF=0.420;AN=50;BaseQRankSum=-3.411;DP=391;FS=6.395;HRun=0;HaplotypeScore=84.3273;InbreedingCoeff=0.2529;MQ=52.49;MQ0=35;MQRankSum=1.564;QD=12.01;ReadPosRankSum=1.424;VQSLOD=1.6656;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:29.88:0,30,561	0/1:5,0:5:30.84:31,0,65	0/0:45,0:12:3.01:0,3,90	0/0:33,0:10:6.06:0,6,114	0/0:13,0:12:4.06:0,4,28	0/0:22,0:19:11.52:0,12,152	1/1:7,1:8:6.01:81,6,0	1/1:16,13:24:32.80:347,33,0	0/1:5,0:4:0:0,0,0	1/1:20,2:19:31.26:575,31,0	1/1:5,6:10:2.96:19,3,0	./.	./.	1/1:12,0:12:4.75:187,5,0	0/0:14,0:14:2.94:0,3,18	0/1:5,1:6:47.08:91,0,47	0/1:20,0:18:15.03:56,0,15	0/0:12,0:12:6.02:0,6,123	0/1:9,5:10:42.89:43,0,62	1/1:19,0:19:24:328,24,0	1/1:6,9:13:9.03:131,9,0	0/0:7,0:7:6:0,6,85	./.	0/0:6,0:3:0.47:0,0,1	0/0:11,0:10:19.80:0,20,291	0/1:23,0:20:99:481,0,138	0/1:8,1:8:24.20:169,0,24	0/0:4,0:3:9.03:0,9,190
chr10	77338100	.	G	GGAGGAGGAA	5842.62	PASS	AB=0.698;AC=34;AF=0.654;AN=52;BaseQRankSum=-1.444;DP=371;FS=1.786;HRun=0;HaplotypeScore=82.6939;InbreedingCoeff=0.3798;MQ=38.12;MQ0=50;MQRankSum=-1.435;QD=22.56;ReadPosRankSum=0.296;VQSLOD=3.6722;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:29.78:0,30,539	1/1:1,2:4:6.02:179,6,0	0/0:27,0:3:3.01:0,3,87	0/0:22,0:6:5.37:0,5,110	0/0:15,0:13:3.65:0,4,27	1/1:7,14:17:6.41:286,6,0	1/1:4,4:9:6.01:81,6,0	1/1:35,0:29:52.99:499,53,0	1/1:3,0:2:3:26,3,0	1/1:21,0:16:40.32:771,40,0	1/1:7,0:6:2.96:19,3,0	./.	0/0:3,0:3:2.88:0,3,15	1/1:11,0:11:24.40:425,24,0	1/1:3,10:14:6.45:162,6,0	1/1:6,0:6:18.05:427,18,0	0/1:9,8:14:14.76:62,0,15	0/1:2,12:14:3.48:180,0,3	1/1:13,0:7:10.26:197,10,0	1/1:7,11:17:24.90:427,25,0	1/1:20,0:16:3:216,3,0	0/1:8,0:6:53.99:54,0,62	./.	0/0:6,0:3:0.89:0,1,2	0/0:15,0:13:15.06:0,15,213	0/1:7,17:18:33.56:932,0,34	1/1:8,0:7:21.07:554,21,0	1/1:2,0:3:9.03:346,9,0
chr10	77338211	.	AGAG	A	4202.89	PASS	AB=0.893;AC=34;AF=0.630;AN=54;BaseQRankSum=-1.759;DP=246;FS=0.680;HRun=0;HaplotypeScore=45.3778;InbreedingCoeff=0.5368;MQ=49.80;MQ0=4;MQRankSum=-2.466;QD=22.72;ReadPosRankSum=2.561;VQSLOD=3.4343;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.48:0,48,702	1/1:5,2:7:21.07:277,21,0	0/0:11,0:5:14.79:0,15,230	0/0:8,0:3:8.52:0,9,125	0/1:10,0:10:19.04:23,0,19	1/1:1,13:14:6.02:74,6,0	1/1:5,2:7:17.68:172,18,0	0/1:12,5:15:4.78:446,0,5	0/0:2,0:1:0:0,0,0	1/1:9,4:13:0.83:404,1,0	1/1:1,16:17:41.44:290,41,0	0/0:4,0:4:8.94:0,9,105	./.	1/1:6,1:7:20.10:251,20,0	1/1:0,8:8:21.02:239,21,0	1/1:0,4:4:6.02:74,6,0	0/1:6,2:8:21.98:118,0,22	1/1:7,3:10:27.04:318,27,0	1/1:6,4:10:24.08:329,24,0	1/1:5,4:9:23.91:245,24,0	1/1:7,7:14:21.03:259,21,0	0/0:3,0:3:3.01:0,3,37	0/1:2,0:2:0:0,0,0	0/0:5,0:5:2.99:0,3,24	0/0:9,0:9:5.72:0,6,142	1/1:10,1:11:32.89:409,33,0	1/1:0,5:5:6.71:79,7,0	1/1:0,12:12:15.05:197,15,0
chr10	77338213	.	A	AGGC	546.39	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-1.843;DP=262;FS=0.000;HRun=0;HaplotypeScore=65.7023;InbreedingCoeff=0.5630;MQ=51.98;MQ0=4;MQRankSum=-0.857;QD=17.63;ReadPosRankSum=0.087;VQSLOD=2.7484;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:45.13:0,45,721	0/0:7,0:7:20.37:0,20,143	0/0:14,0:6:15.04:0,15,232	0/1:9,0:3:4.10:4,0,92	1/1:6,4:10:17.72:281,18,0	0/0:14,0:14:8.85:0,9,56	0/0:7,0:7:17.90:0,18,137	0/0:17,0:15:38.93:0,39,275	1/1:2,0:1:0.47:1,0,0	0/0:14,0:14:41.76:0,42,340	0/0:17,0:17:23.74:0,24,164	0/0:4,0:4:11.63:0,12,68	0/0:1,0:1:2.94:0,3,18	0/0:8,0:8:18.46:0,18,157	0/0:8,0:8:15.31:0,15,102	0/0:4,0:4:5.91:0,6,38	0/0:8,0:8:19.79:0,20,123	0/0:11,0:11:27.16:0,27,196	0/0:11,0:11:26.93:0,27,221	0/0:11,0:11:17.88:0,18,141	0/0:16,0:16:14.28:0,14,102	0/0:3,0:3:3:0,3,26	0/0:3,0:3:5.97:0,6,46	0/0:6,0:6:8.86:0,9,59	1/1:1,9:10:18.06:380,18,0	0/0:12,0:12:32.99:0,33,293	0/0:5,0:5:5.87:0,6,39	0/0:12,0:12:14.90:0,15,109
chr10	77338376	.	AAAAC	A	2538.44	PASS	AB=0.619;AC=15;AF=0.268;AN=56;BaseQRankSum=9.633;DP=443;FS=2.496;HRun=0;HaplotypeScore=72.2337;InbreedingCoeff=0.8749;MQ=52.18;MQ0=9;MQRankSum=1.777;QD=25.64;ReadPosRankSum=2.183;VQSLOD=3.5684;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:54.18:0,54,1222	0/0:8,0:8:21.07:0,21,518	0/0:14,0:6:18.05:0,18,397	0/0:17,0:7:11.99:0,12,172	1/1:3,20:23:39.05:587,39,0	0/0:29,0:29:72.10:0,72,1528	0/0:17,0:17:42.02:0,42,870	0/0:25,0:21:42.08:0,42,885	0/1:5,8:13:41.13:438,0,41	0/0:23,0:23:54.17:0,54,1225	0/0:17,0:17:45.11:0,45,932	1/1:3,5:8:21.06:329,21,0	1/1:0,4:4:12.04:204,12,0	0/0:11,0:11:30.05:0,30,611	0/0:19,0:19:45.13:0,45,952	0/0:13,0:13:33.11:0,33,815	0/0:21,0:21:54.10:0,54,1175	0/0:10,0:10:24.03:0,24,480	0/0:19,0:19:48.07:0,48,1000	0/0:20,0:20:51.16:0,51,1189	0/0:16,0:16:42.01:0,42,813	1/1:3,8:10:21.03:310,21,0	1/1:2,4:6:9.03:153,9,0	1/1:3,15:18:29.90:509,30,0	1/1:2,14:16:12.04:204,12,0	0/0:23,0:23:60.14:0,60,1282	0/0:13,0:12:27.09:0,27,604	0/0:6,0:6:15.05:0,15,369
chr10	77338441	.	GGAGAGAGAGAGAGAGAGAAAGAGAGAGAGA	G	1370.58	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=2.478;DP=491;FS=5.959;HRun=0;HaplotypeScore=314.9957;InbreedingCoeff=0.6665;MQ=53.19;MQ0=9;MQRankSum=0.192;QD=14.43;ReadPosRankSum=0.945;VQSLOD=1.5143;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:44.05:0,44,3171	0/0:4,0:4:6.01:0,6,229	0/0:39,0:14:22.73:0,23,320	0/0:46,0:20:5.19:0,5,117	0/1:22,0:22:5.91:6,0,963	0/0:26,0:25:35.20:0,35,1172	0/0:24,0:23:41.84:0,42,1245	0/0:34,0:34:56.90:0,57,2070	1/1:12,2:14:17.97:452,18,0	0/0:17,0:17:35.85:0,36,1764	0/0:14,0:14:26.07:0,26,1230	1/1:8,0:9:8.88:190,9,0	1/1:2,5:7:5.95:249,6,0	0/0:9,0:9:14.93:0,15,359	0/0:12,0:12:26.05:0,26,463	0/0:10,0:10:27.02:0,27,735	0/0:14,0:14:33.04:0,33,1028	0/0:7,0:7:6.02:0,6,324	0/0:31,0:30:45.89:0,46,2105	0/0:22,0:22:33.38:0,33,1131	0/0:17,0:16:23.98:0,24,1152	1/1:8,0:8:5.85:67,6,0	1/1:11,0:12:12.03:331,12,0	1/1:10,1:10:3.01:232,3,0	0/1:12,0:12:9.91:10,0,711	0/0:23,0:23:54.16:0,54,2184	0/0:17,0:17:39.52:0,40,1606	0/0:7,0:7:9.03:0,9,493
chr10	77338460	.	AAGAGAGAGAGAGAG	A	5183.37	PASS	AB=1.000;AC=42;AF=0.808;AN=52;BaseQRankSum=1.653;DP=462;FS=1.939;HRun=0;HaplotypeScore=158.7862;InbreedingCoeff=0.2069;MQ=50.68;MQ0=20;MQRankSum=-1.417;QD=14.64;ReadPosRankSum=0.121;VQSLOD=4.0324;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:47.85:0,48,2345	1/1:5,0:5:5.35:29,5,0	./.	0/0:28,0:11:0.47:0,0,1	0/0:20,0:19:5.16:0,5,186	1/1:28,0:27:31.25:481,31,0	1/1:14,8:21:6.02:236,6,0	1/1:27,0:25:15.63:228,16,0	0/1:16,0:15:13.92:139,0,14	1/1:13,7:19:14.95:255,15,0	1/1:16,0:16:11.99:192,12,0	0/1:9,0:9:25.26:68,0,25	1/1:6,0:6:3.01:97,3,0	1/1:3,6:9:3.01:89,3,0	1/1:7,4:11:6.02:208,6,0	1/1:6,7:13:8.94:353,9,0	1/1:11,3:14:12.07:607,12,0	0/1:7,0:7:7.78:221,0,8	1/1:14,9:21:21.04:407,21,0	1/1:12,8:19:17.52:384,18,0	1/1:20,0:17:5.96:65,6,0	./.	1/1:9,0:9:3.01:97,3,0	0/1:11,0:8:10.34:91,0,10	1/1:14,0:14:2.11:7,2,0	1/1:14,7:21:20.95:417,21,0	1/1:8,14:22:11.58:392,12,0	1/1:3,8:10:3.01:118,3,0
chr10	77340698	.	C	CG	1536.54	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.985;DP=628;FS=1.243;HRun=2;HaplotypeScore=70.0797;InbreedingCoeff=0.9993;MQ=94.01;MQ0=0;MQRankSum=0.578;QD=34.15;ReadPosRankSum=1.437;VQSLOD=3.9559;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1276	0/0:15,0:15:45.13:0,45,536	0/0:29,0:29:80.04:0,80,878	0/0:27,0:27:54.28:0,54,750	1/1:1,30:31:80.52:1073,81,0	0/0:17,0:17:48.13:0,48,580	0/0:22,0:22:63.18:0,63,757	0/0:32,0:32:96.29:0,96,1169	0/0:14,0:14:42.12:0,42,507	0/0:26,0:26:75.17:0,75,909	0/0:18,0:18:51.15:0,51,620	0/0:15,0:15:45.12:0,45,533	0/0:23,0:23:66.19:0,66,802	0/0:19,0:19:54.14:0,54,635	0/0:21,0:21:57.18:0,57,706	0/0:16,0:16:48.14:0,48,581	0/0:22,0:22:66.21:0,66,817	0/0:13,0:13:36.08:0,36,430	0/0:28,0:28:81.21:0,81,968	0/0:26,0:26:78.23:0,78,944	0/0:22,0:22:63.18:0,63,759	0/0:28,0:28:81.17:0,81,938	0/0:22,0:22:63.20:0,63,777	0/0:37,0:37:99:0,105,1264	1/1:0,14:14:42.14:585,42,0	0/0:20,0:20:57.17:0,57,695	0/0:24,0:24:66.20:0,66,806	0/0:10,0:10:27.08:0,27,334
chr10	77340878	.	TGTGCAC	T	842.84	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.294;DP=668;FS=62.628;HRun=0;HaplotypeScore=166.1715;InbreedingCoeff=0.9477;MQ=67.34;MQ0=15;MQRankSum=-3.366;QD=7.20;ReadPosRankSum=-0.409;VQSLOD=0.8375;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,99,2574	0/0:9,0:9:15.05:0,15,290	0/0:42,0:20:59.87:0,60,1345	0/0:51,0:30:52.03:0,52,1684	0/0:37,0:37:62.93:0,63,1176	0/0:13,0:13:30.09:0,30,593	0/0:27,0:27:60.20:0,60,1275	0/0:22,0:21:51.17:0,51,1207	1/1:13,0:13:11.77:131,12,0	0/0:18,0:17:48.16:0,48,1009	0/0:19,0:18:41.96:0,42,778	1/1:17,1:18:17.65:182,18,0	1/1:17,1:18:28.79:259,29,0	0/0:18,0:18:45.15:0,45,956	0/0:20,0:20:53.95:0,54,1109	0/0:14,0:14:36.10:0,36,678	0/0:38,0:38:99:0,105,1997	0/0:28,0:27:72.21:0,72,1435	0/0:26,0:26:72.23:0,72,1577	0/0:15,0:15:39.13:0,39,733	0/0:59,0:59:99:0,135,2595	1/1:22,3:25:14.81:225,15,0	1/1:14,2:15:8.41:101,8,0	1/1:26,1:27:22.19:124,22,0	0/0:13,0:13:18:0,18,323	0/0:22,0:21:63.06:0,63,1097	0/0:18,0:17:33.10:0,33,660	0/0:2,0:2:6.01:0,6,63
chr10	77340880	.	TGCAC	T	1841.28	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.592;DP=654;FS=73.590;HRun=0;HaplotypeScore=140.0696;InbreedingCoeff=0.9512;MQ=66.72;MQ0=15;MQRankSum=-2.713;QD=16.59;ReadPosRankSum=0.091;VQSLOD=0.4630;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,1:40:99:0,99,2250	0/0:10,0:10:14.84:0,15,276	0/0:42,0:20:59.87:0,60,1345	0/0:50,0:29:51.95:0,52,1682	0/0:34,0:34:62.83:0,63,1119	0/0:12,0:12:30.09:0,30,542	0/0:24,0:24:59.99:0,60,1195	0/0:20,0:19:51.12:0,51,1156	1/1:2,7:9:12.04:192,12,0	0/0:18,0:17:48.13:0,48,952	0/0:19,0:18:41.72:0,42,678	1/1:3,15:18:17.71:339,18,0	1/1:2,15:17:29.91:549,30,0	0/0:18,0:18:45.15:0,45,909	0/0:20,0:20:41.39:0,41,1059	0/0:14,0:14:36.07:0,36,636	0/0:38,0:38:99:0,105,1864	0/0:28,0:27:72.19:0,72,1371	0/0:27,0:27:73.99:0,74,1548	0/0:15,0:15:39.08:0,39,700	0/0:59,0:59:72.21:0,72,2443	1/1:5,20:25:18.05:273,18,0	1/1:2,15:16:9.02:165,9,0	1/1:3,22:25:26.57:504,27,0	0/0:13,0:13:16.61:0,17,284	0/0:22,0:21:60.43:0,60,1017	0/0:18,0:17:31.65:0,32,564	0/0:2,0:2:5.99:0,6,50
chr10	77340884	.	CGT	C	3095.27	PASS	AB=0.815;AC=37;AF=0.712;AN=52;BaseQRankSum=-2.756;DP=643;FS=8.578;HRun=0;HaplotypeScore=113.7857;InbreedingCoeff=0.1008;MQ=61.44;MQ0=19;MQRankSum=-0.209;QD=6.25;ReadPosRankSum=0.527;VQSLOD=2.8198;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:38:31.20:31,0,508	1/1:4,4:9:5.83:47,6,0	./.	./.	1/1:15,11:32:29.72:255,30,0	0/1:6,8:14:43.77:145,0,44	0/1:15,9:25:14.34:189,0,14	1/1:18,0:17:3:33,3,0	0/1:9,0:9:11.16:13,0,11	1/1:11,5:16:17.88:179,18,0	0/1:8,9:15:17.62:236,0,18	0/0:18,0:18:1.60:0,2,23	0/0:17,0:17:15.13:0,15,92	1/1:11,10:20:18.05:199,18,0	1/1:14,5:20:17.75:176,18,0	1/1:7,3:14:17.55:141,18,0	0/1:21,12:37:40.19:332,0,40	1/1:15,11:26:26.90:279,27,0	1/1:20,3:24:11.87:113,12,0	1/1:6,6:13:20.89:213,21,0	1/1:47,2:55:18.88:263,19,0	0/1:25,0:25:9.46:19,0,9	0/1:18,0:17:3.11:3,0,12	0/0:26,0:26:21.47:0,21,83	1/1:6,6:14:8.69:61,9,0	1/1:15,4:24:26.36:208,26,0	0/1:8,9:17:9.19:84,0,9	1/1:1,0:1:3.01:33,3,0
chr10	77341181	.	AGTTTTGTTTTGTTTTTTTTTTTTTTTT	A	4334.15	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.887;DP=418;FS=18.350;HRun=0;HaplotypeScore=272.9929;InbreedingCoeff=0.8992;MQ=75.84;MQ0=1;MQRankSum=-3.972;QD=67.72;ReadPosRankSum=4.334;VQSLOD=2.7945;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:60.11:0,60,5566	0/0:5,0:5:10.34:0,10,544	0/0:28,0:14:26.21:0,26,899	0/0:25,0:13:25.55:0,26,580	0/0:19,0:19:40.44:0,40,1566	0/0:13,0:13:34.65:0,35,1400	0/0:14,0:14:37.33:0,37,1847	0/0:22,0:21:51.14:0,51,1955	1/1:0,10:10:15.05:1068,15,0	0/0:10,0:9:24.97:0,25,1348	0/0:9,0:8:18.05:0,18,935	1/1:0,11:11:12.04:856,12,0	1/1:1,13:14:15.05:1070,15,0	0/0:8,0:8:21.07:0,21,1185	0/0:13,0:13:29.98:0,30,1761	0/0:19,0:19:57.14:0,57,2613	0/0:26,0:26:44.17:0,44,2453	0/0:23,0:22:51.58:0,52,2460	0/0:31,0:31:69.14:0,69,2712	0/0:13,0:13:30.08:0,30,1631	0/0:9,0:9:19.12:0,19,836	1/1:1,8:9:12.04:681,12,0	1/1:2,7:9:1.59:212,2,0	1/1:2,9:10:8.99:448,9,0	0/0:7,0:7:15.04:0,15,456	0/0:18,0:18:38.77:0,39,1701	0/0:11,0:10:26.41:0,26,1324	0/0:4,0:4:12.04:0,12,479
chr10	77341184	.	TTTGTTTTG	T	5165.09	PASS	AB=0.975;AC=39;AF=0.696;AN=56;BaseQRankSum=5.471;DP=417;FS=32.653;HRun=0;HaplotypeScore=129.0711;InbreedingCoeff=-0.1532;MQ=72.10;MQ0=8;MQRankSum=-3.379;QD=14.35;ReadPosRankSum=5.332;VQSLOD=2.2087;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:72.12:0,72,2067	0/1:4,1:5:15.79:96,0,16	0/1:30,0:12:13.95:14,0,326	0/0:24,0:12:10.76:0,11,255	0/1:18,0:18:10.89:11,0,124	1/1:13,0:13:8.92:134,9,0	0/1:12,1:13:11.45:378,0,11	0/1:19,2:20:79.39:321,0,79	1/1:11,0:10:15.05:365,15,0	1/1:10,0:9:21.75:253,22,0	0/1:10,0:8:18.53:19,0,21	1/1:11,0:11:12.04:292,12,0	1/1:14,0:14:15.05:366,15,0	1/1:7,0:7:4.40:30,4,0	0/1:13,0:13:21.48:179,0,21	0/1:20,0:19:48.54:229,0,49	0/1:22,0:22:49.31:330,0,49	0/1:23,0:22:21.23:267,0,21	0/1:30,0:27:49.11:442,0,49	1/1:12,0:12:2.17:238,2,0	1/1:9,0:9:16.99:149,17,0	1/1:10,0:8:12.04:259,12,0	1/1:9,0:9:3.01:73,3,0	1/1:11,0:10:8.99:166,9,0	0/1:7,0:7:17.94:18,0,43	1/1:14,2:16:12.46:263,12,0	1/1:10,1:10:15.75:215,16,0	0/1:4,0:4:11.15:57,0,11
chr10	77341187	.	GTTTTGTTT	G	8200.55	PASS	AB=0.973;AC=48;AF=0.857;AN=56;BaseQRankSum=-1.364;DP=429;FS=16.369;HRun=0;HaplotypeScore=120.1994;InbreedingCoeff=0.3798;MQ=66.08;MQ0=11;MQRankSum=-0.550;QD=22.10;ReadPosRankSum=2.767;VQSLOD=3.1162;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:33:69.22:0,69,2154	1/1:6,0:5:7.56:139,8,0	0/1:30,0:11:13.65:14,0,217	0/0:21,0:10:19.43:0,19,135	1/1:18,0:18:12.29:111,12,0	1/1:12,1:14:20.52:361,21,0	1/1:13,2:15:29.97:549,30,0	1/1:22,0:21:24.71:521,25,0	1/1:11,0:10:15.05:275,15,0	1/1:11,0:9:27.07:453,27,0	1/1:11,1:9:14.12:95,14,0	1/1:11,0:11:12.04:220,12,0	1/1:13,0:13:15.05:276,15,0	1/1:10,0:10:27:201,27,0	0/1:14,0:13:2.81:262,0,3	1/1:20,0:19:27.28:543,27,0	0/1:22,3:25:37.24:686,0,37	1/1:21,1:21:43.04:555,43,0	1/1:28,0:26:51.66:831,52,0	1/1:12,0:12:26.94:447,27,0	1/1:10,0:9:27.04:361,27,0	1/1:10,0:8:12:187,12,0	1/1:7,0:7:3.01:55,3,0	1/1:11,0:10:6.02:110,6,0	0/1:8,0:8:6.31:18,0,6	1/1:14,0:14:32.80:449,33,0	1/1:10,1:10:29.11:368,29,0	1/1:4,0:4:8.99:115,9,0
chr10	77341191	.	TG	T	5173.39	PASS	AB=0.968;AC=51;AF=0.911;AN=56;BaseQRankSum=2.133;DP=446;FS=40.853;HRun=1;HaplotypeScore=89.1432;InbreedingCoeff=0.5989;MQ=59.45;MQ0=17;MQRankSum=-1.187;QD=13.40;ReadPosRankSum=0.306;VQSLOD=1.7922;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:33:23.34:0,23,474	1/1:6,0:5:11.75:95,12,0	0/1:29,1:8:13.15:13,0,81	0/0:23,0:9:8.30:0,8,105	1/1:19,0:18:35.04:258,35,0	1/1:13,1:14:37.15:284,37,0	1/1:15,0:14:34.77:258,35,0	1/1:21,0:19:41.24:382,41,0	1/1:11,0:10:13.31:58,13,0	1/1:10,1:9:26.91:231,27,0	1/1:15,0:11:16.91:120,17,0	1/1:12,0:11:10.39:41,10,0	1/1:14,0:13:13.15:52,13,0	1/1:13,0:13:35.07:245,35,0	1/1:16,0:15:31.53:258,32,0	1/1:14,4:17:50.89:436,51,0	1/1:24,0:24:46.49:459,46,0	1/1:23,0:22:43.73:363,44,0	1/1:26,2:25:59.72:466,60,0	1/1:13,0:13:30.33:239,30,0	1/1:10,0:9:26.95:229,27,0	1/1:10,0:8:10.96:54,11,0	1/1:7,0:7:2.60:10,3,0	1/1:11,0:10:5.36:21,5,0	1/1:11,0:11:10.01:56,10,0	1/1:17,0:16:27.70:276,28,0	1/1:13,0:12:25.31:192,25,0	1/1:4,0:4:8.98:76,9,0
chr10	77341207	.	TTG	T	3679.91	PASS	AB=0.980;AC=45;AF=0.804;AN=56;BaseQRankSum=6.326;DP=531;FS=24.599;HRun=0;HaplotypeScore=97.0393;InbreedingCoeff=-0.0468;MQ=44.68;MQ0=44;MQRankSum=-0.279;QD=7.68;ReadPosRankSum=-2.865;VQSLOD=0.8731;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:41:7.10:0,7,463	1/1:6,0:5:5.82:75,6,0	1/1:26,0:5:5.04:33,5,0	0/1:15,0:5:15.03:15,0,20	1/1:18,0:16:23.49:149,23,0	0/1:14,0:13:24.90:136,0,25	1/1:17,1:16:25.86:242,26,0	0/1:22,0:19:0.39:165,0,0	1/1:12,0:11:14.60:82,15,0	1/1:19,0:15:28.46:248,28,0	0/1:15,2:12:21.18:98,0,21	1/1:12,0:11:11.70:66,12,0	1/1:16,0:13:14.62:83,15,0	1/1:19,2:21:42.39:321,42,0	0/1:22,2:22:1.86:216,0,2	1/1:21,0:20:23.15:248,23,0	0/1:27,0:25:14.67:251,0,15	0/1:28,0:23:5.22:214,0,5	1/1:28,2:24:11.06:212,11,0	1/1:18,2:19:2:204,2,0	0/1:13,0:10:2.87:61,0,3	1/1:11,0:9:11.74:70,12,0	1/1:7,0:7:2.92:17,3,0	1/1:11,0:10:5.85:33,6,0	1/1:19,0:18:1.55:4,2,0	1/1:20,1:20:3.87:201,4,0	1/1:18,1:19:15:210,15,0	0/1:12,0:5:10.71:26,0,11
chr10	77342199	.	C	CGTGT	5089.15	PASS	AB=1.000;AC=44;AF=0.880;AN=50;BaseQRankSum=0.106;DP=525;FS=11.472;HRun=0;HaplotypeScore=126.2702;InbreedingCoeff=0.4591;MQ=55.79;MQ0=13;MQRankSum=-1.090;QD=12.57;ReadPosRankSum=0.859;VQSLOD=4.0624;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:47:66.22:0,66,1042	1/1:8,0:10:3.01:52,3,0	0/0:42,0:14:6.02:0,6,82	0/1:45,0:26:2.32:2,0,71	1/1:18,6:27:17.53:313,18,0	0/1:9,0:9:0:0,0,0	./.	1/1:24,0:21:9.03:158,9,0	1/1:7,12:19:18.06:433,18,0	1/1:21,0:23:27.09:450,27,0	1/1:16,0:17:3.01:53,3,0	1/1:5,9:16:23.81:472,24,0	1/1:9,8:18:23.82:516,24,0	1/1:9,0:10:3.01:52,3,0	./.	./.	1/1:13,0:13:3.01:56,3,0	1/1:9,0:9:9.03:142,9,0	1/1:10,0:10:12.03:158,12,0	1/1:10,0:12:3.01:52,3,0	1/1:13,0:13:11.44:109,11,0	1/1:12,6:17:12.04:257,12,0	1/1:13,4:18:8.74:217,9,0	1/1:3,14:20:41.61:885,42,0	1/1:17,4:22:9.03:217,9,0	1/1:23,0:22:23.98:280,24,0	1/1:11,0:13:9.03:156,9,0	1/1:16,0:16:3.01:57,3,0
chr10	77342517	.	GGGGC	G	139.34	PASS	AB=0.909;AC=3;AF=0.063;AN=48;BaseQRankSum=3.711;DP=113;FS=0.000;HRun=0;HaplotypeScore=26.0032;InbreedingCoeff=0.1467;MQ=54.99;MQ0=1;MQRankSum=3.628;QD=8.20;ReadPosRankSum=-0.258;VQSLOD=1.0188;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:15.05:0,15,197	./.	1/1:4,3:3:9.03:151,9,0	0/1:9,1:7:81.56:82,0,89	0/0:3,0:3:9.03:0,9,120	0/0:3,0:3:3.01:0,3,39	0/0:5,0:5:12:0,12,136	0/0:9,0:9:27.03:0,27,373	0/0:3,0:3:6.02:0,6,80	0/0:4,0:4:12.04:0,12,208	./.	0/0:4,0:4:9.03:0,9,119	0/0:2,0:2:3.01:0,3,59	0/0:5,0:5:9.03:0,9,137	0/0:4,0:4:3.01:0,3,40	0/0:1,0:1:3.01:0,3,40	0/0:4,0:4:9:0,9,108	0/0:1,0:1:3.01:0,3,40	0/0:4,0:4:12.04:0,12,166	0/0:1,0:1:2.98:0,3,22	0/0:10,0:10:12.02:0,12,162	./.	0/0:5,0:5:12:0,12,144	0/0:7,0:7:6.02:0,6,80	0/0:1,0:1:3.01:0,3,40	0/0:3,0:3:9.03:0,9,127	0/0:3,0:3:6.02:0,6,81	./.
chr10	77345037	.	TTTCTTTC	T	2131.58	PASS	AB=0.976;AC=13;AF=0.232;AN=56;BaseQRankSum=1.411;DP=318;FS=2.416;HRun=0;HaplotypeScore=96.4421;InbreedingCoeff=0.5590;MQ=58.74;MQ0=5;MQRankSum=-2.645;QD=21.32;ReadPosRankSum=-2.218;VQSLOD=2.8427;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:75.13:0,75,2204	0/1:4,0:4:11.81:12,0,132	0/0:19,0:7:15.20:0,15,268	0/1:28,0:12:13.66:14,0,175	0/0:13,0:13:13.97:0,14,760	0/0:3,0:3:9.03:0,9,184	0/0:7,0:7:10.06:0,10,242	0/0:16,0:16:31.19:0,31,390	1/1:14,1:15:35.17:721,35,0	0/0:13,0:13:30.11:0,30,593	0/0:8,0:8:15.82:0,16,286	1/1:4,0:4:12.04:194,12,0	1/1:14,0:14:32.35:536,32,0	0/0:7,0:7:7.33:0,7,315	0/0:5,0:5:7.69:0,8,169	0/0:6,0:6:13.89:0,14,324	0/0:16,0:15:30.75:0,31,555	0/0:13,0:13:13.38:0,13,359	0/0:11,0:11:4.28:0,4,418	0/0:14,0:14:28.10:0,28,618	0/0:8,0:7:3.99:0,4,31	1/1:10,2:11:11.68:397,12,0	0/1:12,1:13:37.82:206,0,38	1/1:8,1:8:10.96:226,11,0	0/0:10,0:10:17.14:0,17,382	0/0:10,0:10:23.72:0,24,500	0/0:4,0:4:7.23:0,7,132	0/0:4,0:4:6.57:0,7,99
chr10	77345039	.	TCTTTC	T	2302.89	PASS	AB=0.951;AC=18;AF=0.321;AN=56;BaseQRankSum=1.437;DP=324;FS=8.383;HRun=0;HaplotypeScore=85.4820;InbreedingCoeff=0.3269;MQ=57.86;MQ0=6;MQRankSum=-3.737;QD=14.30;ReadPosRankSum=-3.959;VQSLOD=0.7643;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:78.08:0,78,1740	0/1:4,0:4:1.38:1,0,70	0/0:20,0:7:20.24:0,20,251	0/1:27,0:12:56.05:56,0,133	0/0:13,0:13:16.95:0,17,607	0/0:3,0:3:9:0,9,114	0/1:7,0:7:7.03:7,0,140	0/1:15,0:15:36.27:36,0,194	1/1:7,8:15:36.08:772,36,0	0/0:13,0:13:22.71:0,23,342	0/0:8,0:8:15.33:0,15,153	1/1:2,2:4:12.04:222,12,0	1/1:9,5:14:25.15:604,25,0	0/0:7,0:7:12.71:0,13,190	0/0:5,0:5:7.07:0,7,83	0/0:7,0:7:12.89:0,13,195	0/1:15,0:16:16.68:17,0,279	0/0:12,0:13:9.09:0,9,234	0/1:13,0:13:6.23:6,0,240	0/0:12,0:14:17.61:0,18,365	0/1:7,0:6:6.74:7,0,18	1/1:9,2:10:23.23:368,23,0	0/1:9,6:15:43.56:166,0,44	1/1:9,0:8:11.66:220,12,0	0/0:12,0:10:17.52:0,18,324	0/0:9,0:9:22.83:0,23,282	0/0:4,0:4:3.72:0,4,59	0/0:4,0:4:6.39:0,6,70
chr10	77345040	.	C	CT	644.44	PASS	AB=0.860;AC=28;AF=0.500;AN=56;BaseQRankSum=0.649;DP=338;FS=3.720;HRun=3;HaplotypeScore=80.0511;InbreedingCoeff=0.1227;MQ=55.91;MQ0=7;MQRankSum=-2.406;QD=3.10;ReadPosRankSum=-2.159;VQSLOD=-0.6836;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:36.83:0,37,794	1/1:2,2:4:1.92:23,2,0	0/0:22,0:7:3.33:0,3,102	0/1:31,0:13:13.35:13,0,60	0/0:13,0:13:38.41:0,38,332	0/1:1,2:3:4.74:38,0,5	0/1:7,1:8:0.26:20,0,0	0/1:16,0:17:12.14:14,0,12	0/1:15,0:15:18.91:19,0,52	1/1:8,3:13:14.16:108,14,0	0/1:6,2:8:23:34,0,23	0/0:4,0:4:1.11:0,1,5	0/0:14,0:14:13.18:0,13,62	1/1:3,3:7:8.40:53,8,0	0/0:5,0:5:5.63:0,6,28	0/1:6,0:7:20.83:57,0,21	0/1:14,2:16:4.41:92,0,4	1/1:8,4:13:2.72:59,3,0	0/1:9,1:12:14.37:31,0,14	0/1:12,1:14:21.50:42,0,21	1/1:3,3:6:2.99:25,3,0	0/0:11,0:10:8.24:0,8,50	0/0:15,0:15:15.34:0,15,121	1/1:10,0:9:0.34:7,0,0	0/0:12,0:10:17.71:0,18,175	1/1:4,3:9:3.50:84,4,0	1/1:3,1:4:4.19:22,4,0	1/1:6,1:7:8.96:68,9,0
chr10	77345043	.	TC	T	2634.73	PASS	AB=0.990;AC=45;AF=0.804;AN=56;BaseQRankSum=2.360;DP=345;FS=2.136;HRun=1;HaplotypeScore=68.4487;InbreedingCoeff=0.5245;MQ=55.15;MQ0=7;MQRankSum=-2.317;QD=10.25;ReadPosRankSum=-0.014;VQSLOD=1.3609;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:65.76:0,66,654	1/1:4,0:4:9.99:67,10,0	0/0:27,1:7:11.13:0,11,71	0/1:32,1:14:41.71:42,0,45	0/0:14,0:14:8.38:0,8,162	1/1:3,0:3:7.66:34,8,0	1/1:8,1:8:15.41:105,15,0	1/1:15,1:16:30.30:230,30,0	1/1:15,0:15:29.91:242,30,0	1/1:10,1:11:30.98:261,31,0	1/1:7,0:7:16.05:138,16,0	1/1:4,0:4:11.46:79,11,0	1/1:15,0:15:22.71:229,23,0	1/1:7,0:7:11.89:68,12,0	1/1:5,0:5:5.30:34,5,0	1/1:7,0:7:12.11:66,12,0	1/1:13,4:16:34.24:208,34,0	1/1:12,2:14:7.41:100,7,0	1/1:11,1:12:28.13:188,28,0	1/1:10,4:14:25.64:151,26,0	1/1:6,0:5:6.27:41,6,0	0/1:11,0:10:9.79:116,0,10	0/1:16,0:16:25.47:25,0,33	1/1:10,0:9:11.47:81,11,0	0/0:12,0:10:10.21:0,10,99	1/1:9,0:9:24.75:152,25,0	1/1:4,0:4:9.74:63,10,0	1/1:7,0:7:13.83:83,14,0
chr10	77345044	.	C	CT	865.92	PASS	AB=0.986;AC=34;AF=0.607;AN=56;BaseQRankSum=-1.792;DP=354;FS=2.161;HRun=15;HaplotypeScore=75.9506;InbreedingCoeff=0.1407;MQ=52.49;MQ0=9;MQRankSum=-0.622;QD=3.33;ReadPosRankSum=-2.567;VQSLOD=-0.0518;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,2:32:26.43:0,26,267	1/1:4,0:4:2.99:24,3,0	0/1:31,0:6:7.94:22,0,8	0/1:37,0:15:7.98:15,0,8	1/1:7,7:14:26.38:192,26,0	0/1:3,0:3:4.42:38,0,4	1/1:9,0:8:3.94:27,4,0	0/1:18,0:18:8.67:18,0,9	0/0:14,0:14:7.46:0,7,46	1/1:11,0:11:11.95:95,12,0	1/1:7,0:7:4.24:43,4,0	0/1:4,0:4:7.94:11,0,8	0/0:15,0:15:4.74:0,5,15	1/1:8,0:8:8.43:53,8,0	0/0:5,0:5:5.55:0,6,27	0/1:5,1:6:22.96:33,0,23	0/1:17,0:16:3.09:93,0,3	1/1:14,0:14:2.88:61,3,0	0/1:12,0:12:8.31:37,0,8	0/1:14,0:14:17.69:46,0,18	1/1:6,0:5:1.60:23,2,0	0/0:11,0:10:7.56:0,8,36	0/0:16,0:16:15.42:0,15,60	0/1:11,0:10:1.25:1,0,12	1/1:6,6:10:8.53:62,9,0	1/1:9,0:9:4.32:83,4,0	1/1:4,0:4:5.17:21,5,0	1/1:8,0:8:5.22:31,5,0
chr10	77345060	.	GGT	G	254.38	PASS	AB=0.976;AC=13;AF=0.232;AN=56;BaseQRankSum=6.489;DP=359;FS=46.015;HRun=0;HaplotypeScore=72.9319;InbreedingCoeff=-0.1735;MQ=52.81;MQ0=13;MQRankSum=-5.889;QD=1.63;ReadPosRankSum=-0.393;VQSLOD=-0.2933;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:72.24:0,72,1294	0/0:3,0:3:8.98:0,9,134	0/0:42,0:8:23.25:0,23,323	0/1:40,0:14:8.69:9,0,191	0/1:15,0:15:7.15:7,0,297	0/1:5,0:5:10.78:11,0,132	0/0:7,0:6:11.05:0,11,143	0/1:18,0:18:7.57:8,0,562	0/1:10,3:13:25.70:150,0,26	0/1:11,0:9:6.17:6,0,285	0/0:6,0:6:8.62:0,9,53	1/1:4,0:4:0.69:32,1,0	0/1:10,0:10:29.92:110,0,30	0/0:7,0:7:6.80:0,7,104	0/0:5,0:5:11.58:0,12,145	0/0:6,0:6:12.03:0,12,172	0/0:16,0:14:12.65:0,13,385	0/0:15,0:15:7.34:0,7,350	0/0:14,0:13:27.49:0,27,429	0/0:13,0:13:26.95:0,27,361	0/0:6,0:5:8.99:0,9,131	0/1:9,0:8:7.41:7,0,41	0/1:12,1:13:28.29:28,0,122	0/1:10,0:9:3.95:4,0,111	0/1:8,0:6:20.47:20,0,107	0/0:8,0:8:22.54:0,23,260	0/0:5,0:5:8.99:0,9,120	0/0:18,0:17:21.69:0,22,284
chr10	77346063	.	TA	T	2331.16	PASS	AB=0.734;AC=47;AF=0.839;AN=56;BaseQRankSum=1.019;DP=479;FS=5.116;HRun=16;HaplotypeScore=64.4631;InbreedingCoeff=0.2129;MQ=74.20;MQ0=4;MQRankSum=-0.073;QD=6.22;ReadPosRankSum=3.504;VQSLOD=2.8229;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,5:28:24.08:24,0,226	1/1:0,2:4:9.96:48,10,0	0/0:61,0:28:21:0,21,129	0/0:42,0:16:5.82:0,6,39	1/1:14,5:21:26.37:142,26,0	1/1:7,10:18:13.88:79,14,0	1/1:4,11:17:34.24:201,34,0	1/1:9,13:23:33.32:191,33,0	1/1:2,0:10:14.24:41,14,0	1/1:5,11:18:11.19:165,11,0	0/1:5,5:11:8.51:61,0,9	1/1:2,0:5:4.05:12,4,0	1/1:2,0:14:22.38:64,22,0	1/1:4,4:9:7.76:37,8,0	1/1:1,7:8:14.69:90,15,0	1/1:7,2:9:5.77:36,6,0	1/1:9,19:30:48.04:281,48,0	0/1:6,5:13:28.02:62,0,28	1/1:2,9:15:34.38:179,34,0	1/1:5,11:17:1.14:117,1,0	1/1:1,3:5:4.97:24,5,0	1/1:4,0:7:6.08:17,6,0	1/1:4,0:17:24.39:69,24,0	1/1:0,0:9:16.30:46,16,0	1/1:1,11:13:25.56:149,26,0	1/1:10,16:28:19.92:220,20,0	0/1:11,5:20:16.51:113,0,17	0/1:4,1:5:10.51:12,0,11
chr10	77346440	.	G	GGGAA	4325.35	PASS	AB=0.849;AC=13;AF=0.232;AN=56;BaseQRankSum=-7.092;DP=579;FS=12.435;HRun=0;HaplotypeScore=90.3983;InbreedingCoeff=0.7199;MQ=57.98;MQ0=2;MQRankSum=3.520;QD=28.46;ReadPosRankSum=3.004;VQSLOD=3.5569;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:93.24:0,93,1397	0/0:11,0:11:27.09:0,27,453	0/1:18,0:10:8.73:9,0,218	0/1:23,0:15:8.72:9,0,278	0/0:32,0:32:77.98:0,78,1215	0/0:15,0:15:39.13:0,39,639	0/0:27,0:27:57.15:0,57,898	0/0:24,0:23:51.13:0,51,737	1/1:4,14:18:36.12:892,36,0	0/0:20,0:20:54.17:0,54,860	0/0:21,0:21:39.11:0,39,603	1/1:5,15:20:39.07:945,39,0	1/1:4,8:13:15.05:372,15,0	0/0:9,0:9:21.07:0,21,352	0/0:18,0:18:39.13:0,39,650	0/0:11,0:11:33.11:0,33,551	0/0:26,0:26:18.58:0,19,865	0/0:24,0:24:44.32:0,44,870	0/0:25,0:24:45.11:0,45,664	0/0:18,0:18:42.13:0,42,680	0/0:23,0:23:54.16:0,54,851	0/1:3,12:17:11.40:618,0,11	1/1:5,14:19:18.06:446,18,0	1/1:3,21:24:42.14:1034,42,0	0/0:18,0:18:39.10:0,39,576	0/0:14,0:14:33.11:0,33,552	0/0:19,0:18:54.14:0,54,832	0/0:32,0:32:90.29:0,90,1470
chr10	77346777	.	GT	G	1234.93	PASS	AB=0.821;AC=14;AF=0.250;AN=56;BaseQRankSum=7.169;DP=689;FS=4.855;HRun=14;HaplotypeScore=85.3553;InbreedingCoeff=0.4842;MQ=59.77;MQ0=9;MQRankSum=1.075;QD=6.24;ReadPosRankSum=2.908;VQSLOD=2.9827;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,3:45:17.52:0,18,681	0/0:8,1:10:9.28:0,9,213	0/0:50,0:12:6.47:0,6,52	0/0:47,0:13:4.91:0,5,71	0/0:25,1:28:13.50:0,13,372	0/0:22,1:25:38.17:0,38,451	0/0:14,2:16:12.45:0,12,258	0/1:34,3:40:30.61:31,0,392	1/1:3,17:21:40.66:268,41,0	0/0:18,2:21:2.87:0,3,325	0/0:18,0:20:46.95:0,47,396	1/1:3,15:18:1.73:149,2,0	1/1:3,11:14:23.76:164,24,0	0/0:14,0:13:9.65:0,10,217	0/0:18,2:20:0.72:0,1,280	0/0:15,0:15:33.03:0,33,303	0/0:29,2:31:42.91:0,43,660	0/0:28,1:29:44.72:0,45,523	0/1:17,2:24:24.31:24,0,192	0/0:15,0:21:41.59:0,42,311	0/0:23,0:24:38.17:0,38,371	0/1:8,14:23:11.57:200,0,12	1/1:3,15:20:42.74:279,43,0	1/1:3,13:16:41.61:287,42,0	0/0:18,1:19:13.31:0,13,270	0/0:24,1:25:35.35:0,35,482	0/0:27,1:30:53.45:0,53,592	0/1:19,3:22:4.39:4,0,369
chr10	77348072	.	A	ACTCCAGGGC	15661.98	PASS	AC=32;AF=0.593;AN=54;BaseQRankSum=-4.709;DP=521;FS=0.986;HRun=0;HaplotypeScore=140.1062;InbreedingCoeff=0.9359;MQ=78.39;MQ0=0;MQRankSum=-13.162;QD=49.56;ReadPosRankSum=-4.096;VQSLOD=4.1149;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:75.26:0,75,1978	1/1:5,1:6:9.03:340,9,0	0/0:17,0:17:12.03:0,12,223	0/0:22,0:22:29.93:0,30,565	0/0:21,0:21:42.13:0,42,983	1/1:15,9:24:39.13:1426,39,0	1/1:27,9:36:45.15:1860,45,0	1/1:15,0:15:21.04:515,21,0	0/0:17,0:17:39.12:0,39,945	1/1:11,9:21:33.11:1353,33,0	./.	0/0:17,0:17:45.15:0,45,1230	0/0:16,0:16:36.11:0,36,892	1/1:15,10:25:42.14:1710,42,0	1/1:6,14:20:39.13:1669,39,0	1/1:6,4:10:12.04:525,12,0	1/1:15,7:23:26.57:986,27,0	1/1:17,5:23:21.03:700,21,0	1/1:13,7:20:33.11:1128,33,0	1/1:7,2:9:3.01:136,3,0	1/1:22,9:34:9.64:264,10,0	0/0:6,0:6:15.05:0,15,416	0/0:5,0:5:12.03:0,12,275	0/0:27,0:27:63.22:0,63,1704	0/0:6,0:6:12.04:0,12,333	1/1:6,6:13:21.07:959,21,0	1/1:15,6:21:27.09:1038,27,0	1/1:7,8:16:27.09:1053,27,0
chr10	77349784	.	TGAGAGAGAGAGAGAGAGAGA	T	3755.82	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=7.649;DP=473;FS=14.163;HRun=0;HaplotypeScore=229.0871;InbreedingCoeff=0.8196;MQ=61.86;MQ0=6;MQRankSum=-6.653;QD=43.67;ReadPosRankSum=1.421;VQSLOD=1.7360;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:12.04:0,12,825	0/0:7,0:7:12.04:0,12,750	./.	0/0:53,0:19:6.37:0,6,61	0/0:9,0:9:9.03:0,9,638	0/0:13,0:13:12.04:0,12,688	0/0:18,0:19:36.12:0,36,2738	0/0:19,0:19:12.04:0,12,614	1/1:9,10:18:24.08:1277,24,0	0/0:17,0:17:33.09:0,33,2370	0/0:7,0:7:9.50:0,10,781	1/1:6,5:12:18.06:938,18,0	1/1:7,6:13:12.04:639,12,0	0/0:15,0:15:30.10:0,30,2381	0/0:16,0:16:33.11:0,33,2816	0/0:13,0:13:21.07:0,21,1495	0/0:20,0:20:35.71:0,36,2484	0/0:11,0:12:17.74:0,18,1150	0/0:21,0:20:20.66:0,21,1333	0/0:14,0:14:6.02:0,6,215	0/0:28,0:28:42.14:0,42,3427	1/1:9,1:10:3.01:159,3,0	1/1:12,5:17:12.04:584,12,0	1/1:11,4:15:3.01:160,3,0	0/0:13,0:13:21.07:0,21,1525	0/0:16,0:19:33.07:0,33,1608	0/0:18,0:18:25.90:0,26,1829	0/0:10,0:10:21.04:0,21,1418
chr10	77350321	.	TTCTC	T	3007.79	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.739;DP=556;FS=9.885;HRun=0;HaplotypeScore=92.3865;InbreedingCoeff=0.9757;MQ=66.77;MQ0=0;MQRankSum=-0.878;QD=33.42;ReadPosRankSum=2.054;VQSLOD=2.8485;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:75.04:0,75,1672	0/0:11,0:11:33.06:0,33,760	0/0:17,0:16:17.15:0,17,384	0/0:14,0:12:7.38:0,7,336	0/0:36,0:36:78.25:0,78,1812	0/0:27,0:27:72.06:0,72,1701	0/0:10,0:10:24.08:0,24,597	0/0:20,0:20:48.13:0,48,1053	1/1:3,17:20:36.12:624,36,0	0/0:30,0:30:75.20:0,75,1779	0/0:30,0:30:87.22:0,87,2043	1/1:2,13:15:30.10:521,30,0	1/1:1,13:14:30.10:521,30,0	0/0:17,0:17:45.14:0,45,1058	0/0:14,0:14:30.10:0,30,760	0/0:10,0:10:27.09:0,27,679	0/0:25,0:25:66.20:0,66,1587	0/0:19,0:19:48.12:0,48,1153	0/0:21,0:21:42.11:0,42,862	0/0:30,0:30:81.28:0,81,1907	0/0:7,0:7:21.07:0,21,521	1/1:2,7:9:14.98:226,15,0	1/1:1,19:20:54.18:937,54,0	1/1:1,11:12:21.07:365,21,0	0/0:36,0:36:99:0,105,2566	0/0:27,0:27:71.61:0,72,1707	0/0:22,0:22:60.21:0,60,1440	0/0:11,0:11:27.09:0,27,661
chr10	77351612	.	T	TA	1375.78	PASS	AB=0.807;AC=34;AF=0.607;AN=56;BaseQRankSum=-0.310;DP=571;FS=6.098;HRun=17;HaplotypeScore=85.1331;InbreedingCoeff=-0.0988;MQ=68.49;MQ0=0;MQRankSum=-0.777;QD=2.87;ReadPosRankSum=-1.867;VQSLOD=-0.5660;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:24,20:44:39.82:43,0,40	1/1:3,3:6:2.99:23,3,0	0/0:23,0:13:0.51:0,1,2	0/0:21,0:15:4.44:0,4,18	1/1:17,3:30:12.23:120,12,0	0/1:13,7:21:21.37:21,0,32	0/1:11,14:24:18.47:112,0,18	0/1:19,6:27:9.51:139,0,10	0/1:16,0:16:12.74:13,0,22	1/1:14,8:22:20.84:149,21,0	1/1:12,2:17:2.12:76,2,0	0/0:11,0:12:4.12:0,4,20	0/1:9,0:9:0.02:0,0,23	1/1:8,8:15:5.83:37,6,0	0/1:12,11:25:16.52:90,0,17	1/1:6,8:15:5.29:61,5,0	1/1:9,3:24:9.81:72,10,0	0/1:17,1:19:5.58:100,0,6	1/1:29,3:31:13.39:144,13,0	0/1:12,4:16:10.16:90,0,10	1/1:7,7:14:5.96:44,6,0	0/1:4,1:6:1.45:3,0,1	0/1:9,1:12:10.20:10,0,29	0/0:28,0:33:28.26:0,28,148	0/1:10,3:20:34.50:35,0,41	0/1:24,2:26:9.07:28,0,9	1/1:12,12:24:15.89:100,16,0	0/1:7,5:12:20.99:21,0,22
chr10	77351855	.	TGCAC	T	3583.83	PASS	AB=0.623;AC=31;AF=0.574;AN=54;BaseQRankSum=-5.541;DP=536;FS=0.000;HRun=0;HaplotypeScore=101.7729;InbreedingCoeff=0.7782;MQ=65.11;MQ0=3;MQRankSum=1.842;QD=11.10;ReadPosRankSum=0.460;VQSLOD=3.0751;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:51.15:0,51,981	1/1:7,2:9:6.02:97,6,0	0/0:23,0:13:18.52:0,19,328	0/0:30,0:24:41.49:0,41,647	0/0:18,0:18:39.11:0,39,672	1/1:7,10:17:12.04:195,12,0	1/1:24,0:23:24.07:368,24,0	1/1:18,7:25:21.05:296,21,0	0/0:17,0:17:26.87:0,27,487	1/1:12,10:22:11.11:484,11,0	./.	0/0:19,0:19:33.11:0,33,624	0/0:16,0:16:23.73:0,24,396	1/1:17,0:16:24.08:387,24,0	1/1:13,19:32:9.03:147,9,0	1/1:15,0:15:3.01:41,3,0	1/1:13,17:30:9.03:147,9,0	1/1:7,6:13:3.01:49,3,0	1/1:14,0:14:24.02:341,24,0	1/1:13,0:12:3.01:48,3,0	0/1:17,26:43:6.94:173,0,7	0/0:8,0:8:9.03:0,9,171	0/0:10,0:10:18.04:0,18,307	0/0:21,0:21:33.11:0,33,579	0/0:9,0:9:24.08:0,24,430	1/1:20,0:20:39.13:631,39,0	1/1:23,1:24:5.60:81,6,0	1/1:5,0:5:6.02:98,6,0
chr10	77351877	.	CACGCAGAG	C	3970.77	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-3.466;DP=509;FS=6.810;HRun=0;HaplotypeScore=113.1600;InbreedingCoeff=0.5347;MQ=54.56;MQ0=20;MQRankSum=1.702;QD=13.37;ReadPosRankSum=0.513;VQSLOD=1.2981;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:59.98:0,60,1126	1/1:4,0:4:6.02:97,6,0	0/0:23,0:6:18.05:0,18,327	0/0:32,0:15:41.49:0,41,646	0/0:21,0:20:45.60:0,46,771	0/1:18,0:18:54.08:180,0,54	1/1:24,0:23:35.70:484,36,0	1/1:12,0:10:21.05:296,21,0	0/0:17,0:16:34.06:0,34,601	0/1:19,0:18:28.96:454,0,29	0/0:4,7:11:1.36:0,1,3	0/0:15,0:15:15.45:0,15,652	0/1:14,0:13:2.91:3,0,460	0/1:18,0:17:14.71:379,0,15	1/1:27,0:27:8.60:147,9,0	1/1:5,0:17:4:149,4,0	1/1:22,0:22:11.84:193,12,0	1/1:13,0:13:10.30:141,10,0	1/1:9,0:17:30.02:396,30,0	1/1:4,7:9:2.81:48,3,0	0/1:41,0:39:6.95:196,0,7	0/0:8,0:7:9.03:0,9,171	0/0:10,0:10:18.04:0,18,307	0/0:23,0:23:42:0,42,730	0/0:10,0:10:27.09:0,27,522	1/1:2,14:16:39.13:631,39,0	1/1:6,0:20:4.80:79,5,0	1/1:3,0:3:6.02:98,6,0
chr10	77351882	.	A	AC	388.93	PASS	AB=0.958;AC=8;AF=0.143;AN=56;BaseQRankSum=2.462;DP=523;FS=2.303;HRun=1;HaplotypeScore=98.1081;InbreedingCoeff=0.3191;MQ=53.19;MQ0=23;MQRankSum=1.623;QD=4.18;ReadPosRankSum=3.153;VQSLOD=0.8134;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,1:40:65.73:0,66,921	0/0:3,0:3:5.90:0,6,38	0/0:20,0:6:16.86:0,17,187	0/0:29,0:12:22.67:0,23,289	0/0:18,0:17:39.60:0,40,542	0/0:20,0:20:18.35:0,18,148	0/0:22,0:21:38.52:0,39,372	0/0:18,0:16:38.88:0,39,400	0/1:19,0:18:82.10:82,0,103	0/0:19,0:16:44.06:0,44,356	0/0:11,0:11:3.48:0,3,42	1/1:14,0:14:8.56:157,9,0	0/1:18,1:18:41.28:50,0,41	0/0:19,0:17:38.96:0,39,388	0/0:27,0:27:14.90:0,15,142	0/0:19,0:19:14.33:0,14,145	0/0:24,0:24:15.14:0,15,91	0/0:12,1:12:18.32:0,18,178	0/0:20,0:19:49.80:0,50,472	0/0:11,0:9:2.98:0,3,21	0/0:45,0:43:20.01:0,20,146	1/1:9,0:8:8.87:58,9,0	0/1:10,0:10:6.12:78,0,6	0/1:19,3:22:99:102,0,104	0/0:11,0:11:24.08:0,24,333	0/0:16,0:16:45.91:0,46,372	0/0:21,0:21:12.76:0,13,133	0/0:4,0:4:9.48:0,9,95
chr10	77351883	.	G	GC	336.51	PASS	AB=0.957;AC=8;AF=0.143;AN=56;BaseQRankSum=2.197;DP=530;FS=0.749;HRun=0;HaplotypeScore=97.1637;InbreedingCoeff=0.2868;MQ=52.07;MQ0=24;MQRankSum=0.822;QD=3.62;ReadPosRankSum=1.498;VQSLOD=3.2012;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:41:65.75:0,66,913	0/0:3,0:3:6.01:0,6,56	0/0:20,0:6:17.64:0,18,202	0/0:28,0:11:23.41:0,23,266	0/0:19,0:18:39.58:0,40,522	0/0:21,0:21:18.46:0,18,178	0/0:23,0:22:38.83:0,39,490	0/0:18,0:16:33.02:0,33,364	0/1:20,0:19:73.24:73,0,121	0/0:19,0:16:42.44:0,42,411	0/0:13,0:13:3.60:0,4,41	1/1:14,0:14:3.83:149,4,0	0/1:17,1:17:25.64:26,0,59	0/0:18,0:16:36.06:0,36,454	0/0:27,0:27:14.98:0,15,155	0/0:19,0:19:14.36:0,14,148	0/0:25,0:25:15.65:0,16,113	0/0:12,0:12:18.40:0,18,189	0/0:20,0:19:50.17:0,50,513	0/0:11,0:9:3:0,3,29	0/0:46,0:44:19.35:0,19,159	1/1:9,0:8:8.87:58,9,0	0/1:10,0:10:6.12:77,0,6	0/1:19,3:22:87.17:87,0,112	0/0:11,0:11:24.08:0,24,330	0/0:16,0:16:46.31:0,46,456	0/0:21,0:21:12.79:0,13,140	0/0:5,0:4:9.50:0,10,126
chr10	77352578	.	CTT	C	5343.98	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-2.413;DP=465;FS=1.978;HRun=14;HaplotypeScore=67.5209;InbreedingCoeff=0.9656;MQ=67.51;MQ0=1;MQRankSum=-2.002;QD=18.43;ReadPosRankSum=4.171;VQSLOD=4.3885;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:83.70:0,84,1069	1/1:1,9:10:30.01:272,30,0	0/0:11,0:10:14.11:0,14,117	0/0:9,0:8:11.19:0,11,170	0/0:11,0:19:48.03:0,48,518	1/1:3,15:18:32.97:305,33,0	1/1:3,14:17:32.20:304,32,0	1/1:9,20:32:63.93:551,64,0	0/0:5,0:15:21.02:0,21,219	1/1:5,10:18:38.21:313,38,0	1/1:4,10:15:26.65:234,27,0	0/0:7,0:11:15.01:0,15,137	0/0:3,0:8:6.01:0,6,71	1/1:3,9:12:17.96:166,18,0	1/1:4,21:25:59.77:555,60,0	1/1:1,12:12:24.02:222,24,0	1/1:0,9:9:21.01:190,21,0	1/1:3,10:13:23.95:222,24,0	1/1:11,13:24:38.72:345,39,0	1/1:9,18:28:50.61:455,51,0	1/1:3,6:9:14.99:139,15,0	0/0:2,0:7:15:0,15,157	0/0:8,0:23:36.04:0,36,361	0/0:3,0:15:23.58:0,24,243	0/0:5,0:24:42.08:0,42,440	1/1:2,19:22:56.74:512,57,0	1/1:1,15:18:35.57:364,36,0	1/1:0,7:7:21.02:194,21,0
chr10	77353992	.	G	GA	4082.44	PASS	AB=0.704;AC=37;AF=0.661;AN=56;BaseQRankSum=-5.750;DP=527;FS=0.497;HRun=13;HaplotypeScore=77.8011;InbreedingCoeff=0.3124;MQ=63.55;MQ0=4;MQRankSum=-1.801;QD=9.79;ReadPosRankSum=-3.081;VQSLOD=2.3292;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,1:38:16.09:0,16,334	1/1:3,6:10:17.98:159,18,0	0/1:21,0:15:3.87:4,0,72	0/0:14,0:7:0.91:0,1,23	0/0:14,0:16:19.69:0,20,125	1/1:6,10:18:33.46:311,33,0	0/1:7,12:20:20.53:134,0,21	1/1:11,16:28:25.58:336,26,0	0/0:17,0:17:29.66:0,30,205	1/1:8,12:20:30.42:258,30,0	1/1:4,9:14:14.13:152,14,0	1/1:3,9:12:1.81:131,2,0	0/0:7,9:16:4.89:0,5,25	0/1:5,8:14:20.25:104,0,20	1/1:3,14:17:3.54:174,4,0	0/1:6,5:11:0.87:138,0,1	1/1:11,34:48:3.68:367,4,0	1/1:4,10:15:18.02:167,18,0	1/1:7,15:23:20.14:319,20,0	1/1:6,7:14:0.13:107,0,0	0/1:4,9:13:20.14:118,0,20	1/1:14,7:22:9.02:180,9,0	1/1:6,11:18:15.90:141,16,0	1/1:2,15:18:29.79:261,30,0	0/0:6,1:7:8.87:0,9,62	1/1:12,12:23:23.07:324,23,0	0/1:13,12:26:17.29:130,0,17	0/1:4,2:6:26.13:67,0,26
chr10	77354452	.	GC	G	1588.95	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.644;DP=696;FS=1.852;HRun=3;HaplotypeScore=73.3511;InbreedingCoeff=0.9843;MQ=89.90;MQ0=0;MQRankSum=-2.103;QD=32.43;ReadPosRankSum=1.536;VQSLOD=4.0786;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,1:53:99:0,122,2201	0/0:17,0:17:51.17:0,51,733	0/0:28,0:28:81.24:0,81,1110	0/0:28,0:28:81.23:0,81,1092	1/1:2,24:26:72.23:893,72,0	0/0:19,0:19:57.18:0,57,804	0/0:25,0:25:69.21:0,69,974	0/0:28,0:28:84.28:0,84,1210	0/0:27,0:27:81.26:0,81,1146	0/0:19,0:19:57.19:0,57,820	0/0:20,0:20:60.20:0,60,853	0/0:23,0:23:69.23:0,69,993	0/0:20,0:20:60.20:0,60,863	0/0:31,0:31:87.29:0,87,1243	0/0:19,0:19:57.19:0,57,818	0/0:22,0:22:66.21:0,66,932	0/0:43,0:43:99:0,126,1814	0/0:19,0:19:57.17:0,57,801	0/0:21,0:21:63.19:0,63,887	0/0:22,0:22:63.21:0,63,906	0/0:44,0:44:99:0,132,1846	0/0:19,0:19:54.18:0,54,773	0/0:13,0:13:39.12:0,39,543	0/0:30,0:30:87.29:0,87,1253	1/1:0,23:23:66.21:818,66,0	0/0:25,0:25:75.25:0,75,1080	0/0:28,0:28:84.27:0,84,1185	0/0:4,0:4:12.04:0,12,172
chr10	77354701	.	G	GA	6925.87	PASS	AB=0.727;AC=48;AF=0.857;AN=56;BaseQRankSum=-2.993;DP=453;FS=12.674;HRun=10;HaplotypeScore=67.6360;InbreedingCoeff=0.3223;MQ=63.26;MQ0=2;MQRankSum=-2.061;QD=16.77;ReadPosRankSum=-0.692;VQSLOD=3.9031;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:35:79.12:0,79,628	1/1:3,8:12:9.75:193,10,0	0/1:18,0:13:10.77:11,0,81	0/0:5,0:4:2.97:0,3,24	1/1:8,15:23:41.64:386,42,0	1/1:2,11:14:31.15:305,31,0	0/1:6,14:19:13.20:284,0,13	1/1:4,24:27:67.39:696,67,0	1/1:7,12:19:36.41:348,36,0	1/1:5,11:16:33.50:337,34,0	1/1:3,16:19:14.91:350,15,0	1/1:4,10:14:21.05:219,21,0	1/1:2,14:16:34.96:350,35,0	1/1:0,3:3:3.01:32,3,0	0/1:3,9:12:5.89:140,0,6	1/1:3,3:6:6.36:65,6,0	1/1:4,16:20:33.32:376,33,0	1/1:3,11:14:17.97:168,18,0	0/1:12,6:18:99:186,0,105	1/1:5,9:14:23.98:239,24,0	1/1:3,17:20:45.11:478,45,0	1/1:7,12:19:17.93:164,18,0	1/1:1,8:9:15.51:157,16,0	1/1:3,16:19:30.03:305,30,0	1/1:3,13:18:23.73:220,24,0	1/1:3,16:19:26.64:439,27,0	1/1:10,7:17:35.27:322,35,0	1/1:1,5:6:15.03:156,15,0
chr10	77354726	.	TTGTGTG	T	742.27	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=1.251;DP=488;FS=5.165;HRun=0;HaplotypeScore=128.1664;InbreedingCoeff=0.6724;MQ=55.03;MQ0=18;MQRankSum=-2.789;QD=10.03;ReadPosRankSum=2.193;VQSLOD=2.2196;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:39.13:0,39,951	0/0:10,0:10:5.05:0,5,55	0/0:25,0:13:2.85:0,3,43	0/0:19,0:10:12.04:0,12,175	0/0:16,0:18:18.06:0,18,442	0/0:13,0:13:9.03:0,9,170	0/0:19,0:18:9.46:0,9,209	0/0:23,0:21:12.04:0,12,172	1/1:9,4:15:18.06:323,18,0	0/0:18,0:18:24.08:0,24,529	0/0:18,0:18:5.69:0,6,158	1/1:7,1:8:3.01:61,3,0	1/1:9,2:12:9.03:155,9,0	0/0:12,0:12:6:0,6,98	0/0:14,0:13:5.23:0,5,42	0/0:7,0:7:6.02:0,6,103	0/0:25,0:24:15.75:0,16,213	0/0:18,0:16:22.27:0,22,381	0/0:22,0:20:29.58:0,30,390	0/0:17,0:17:8.78:0,9,160	0/0:31,0:32:5.45:0,5,131	1/1:10,1:11:12.04:204,12,0	1/1:6,0:8:3.90:44,4,0	1/1:16,3:20:8.95:115,9,0	0/0:14,0:15:12:0,12,298	0/0:22,0:21:21.05:0,21,377	0/0:11,0:23:15.93:0,16,305	0/0:4,0:3:6.02:0,6,151
chr10	77359589	.	A	AC	15105.41	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-2.563;DP=562;FS=2.286;HRun=0;HaplotypeScore=77.8050;InbreedingCoeff=0.9689;MQ=61.23;MQ0=11;MQRankSum=-0.808;QD=30.21;ReadPosRankSum=3.763;VQSLOD=5.0912;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:63.17:0,63,808	1/1:0,8:8:21.07:285,21,0	0/0:24,0:9:21.32:0,21,192	0/0:13,0:7:10.80:0,11,115	1/1:1,29:29:74.99:943,75,0	1/1:0,26:26:54.18:733,54,0	1/1:0,18:18:45.13:591,45,0	1/1:2,24:24:69.06:810,69,0	1/1:1,18:18:45.15:611,45,0	1/1:2,26:27:75.10:941,75,0	1/1:1,22:22:56.93:703,57,0	1/1:0,12:10:18.06:245,18,0	1/1:0,17:17:42.14:566,42,0	1/1:0,15:15:39.13:529,39,0	1/1:0,15:14:42.14:569,42,0	1/1:1,20:21:39.05:506,39,0	1/1:4,23:22:54.04:706,54,0	1/1:0,26:26:44.91:644,45,0	1/1:2,25:27:72.08:855,72,0	1/1:1,25:26:69.15:912,69,0	1/1:0,7:6:18.06:244,18,0	1/1:1,7:8:14.96:180,15,0	1/1:1,17:18:45.14:609,45,0	1/1:0,10:8:24.08:325,24,0	1/1:0,16:16:30.03:386,30,0	1/1:1,29:32:75.01:991,75,0	1/1:1,30:31:69.22:934,69,0	1/1:2,10:10:21.07:286,21,0
chr10	77360410	.	CAG	C	611.23	PASS	AB=0.982;AC=11;AF=0.196;AN=56;BaseQRankSum=2.975;DP=433;FS=33.536;HRun=0;HaplotypeScore=64.0166;InbreedingCoeff=0.3104;MQ=43.20;MQ0=21;MQRankSum=-3.605;QD=4.40;ReadPosRankSum=-1.079;VQSLOD=0.7101;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:48.73:0,49,511	0/0:9,0:8:14.70:0,15,93	0/0:17,1:2:0.47:0,0,1	0/0:23,1:1:3.01:0,3,44	0/1:25,2:28:1.99:154,0,2	0/0:13,0:12:9.26:0,9,147	0/0:13,0:12:24.27:0,24,191	0/0:20,0:15:34.51:0,35,214	0/1:14,0:14:24.72:75,0,25	0/0:12,0:11:28.87:0,29,229	0/0:13,0:12:27.57:0,28,218	0/1:14,0:13:12.76:54,0,13	1/1:6,0:6:8.16:87,8,0	0/0:8,0:8:20.05:0,20,204	0/0:10,0:9:14.74:0,15,213	0/0:12,0:10:12.43:0,12,119	0/0:21,0:21:33.90:0,34,309	0/0:19,0:18:30.92:0,31,289	0/0:15,1:16:31.29:0,31,277	0/0:16,0:15:34.25:0,34,271	0/1:13,0:12:9.74:10,0,90	0/1:15,0:16:10.44:92,0,10	1/1:9,1:10:8.98:84,9,0	0/1:16,0:16:3.59:98,0,4	0/1:18,0:17:3.94:106,0,4	0/0:22,0:20:49.88:0,50,395	0/0:11,1:12:15.65:0,16,104	0/0:7,0:6:12.99:0,13,100
chr10	77360411	.	AG	A	1225.19	PASS	AB=0.922;AC=22;AF=0.393;AN=56;BaseQRankSum=0.641;DP=452;FS=119.904;HRun=1;HaplotypeScore=62.8650;InbreedingCoeff=0.5348;MQ=44.06;MQ0=22;MQRankSum=-4.121;QD=5.02;ReadPosRankSum=-5.102;VQSLOD=0.0238;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:31:6.16:6,0,318	0/0:11,0:10:3.24:0,3,100	0/0:18,0:2:1.25:0,1,3	0/0:25,1:3:6.49:0,6,66	1/1:28,4:30:39.54:233,40,0	0/1:10,2:11:28.53:29,0,101	0/0:15,0:14:25.93:0,26,170	0/1:22,0:17:3.45:3,0,163	1/1:12,2:14:25.39:179,25,0	0/0:14,0:13:28.71:0,29,218	0/0:14,0:13:30.19:0,30,182	1/1:14,0:13:18.05:123,18,0	1/1:7,0:6:16.92:129,17,0	0/0:9,0:9:20.80:0,21,185	0/0:11,0:10:22.70:0,23,184	0/0:12,0:10:14.70:0,15,119	0/1:21,2:22:9.75:10,0,221	0/0:16,3:18:9.15:0,9,208	0/1:13,1:13:0.38:0,0,161	0/0:16,0:15:37.66:0,38,245	0/1:11,3:12:28.94:29,0,62	1/1:12,0:12:11.78:141,12,0	1/1:9,0:9:20.88:129,21,0	1/1:15,1:16:25.32:190,25,0	1/1:21,1:21:21.43:218,21,0	0/0:23,1:22:36.48:0,36,382	0/0:11,1:12:6.36:0,6,77	0/0:7,0:6:14.31:0,14,95
chr10	77360608	.	C	CAG	3574.12	PASS	AB=0.696;AC=10;AF=0.179;AN=56;BaseQRankSum=-9.466;DP=669;FS=16.998;HRun=0;HaplotypeScore=94.6033;InbreedingCoeff=0.4134;MQ=71.05;MQ0=4;MQRankSum=-2.690;QD=23.36;ReadPosRankSum=2.014;VQSLOD=3.2607;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:51:89.90:0,90,1000	0/0:10,0:10:30.09:0,30,356	0/0:34,0:30:15.90:0,16,314	0/0:53,0:42:47.19:0,47,588	0/0:4,0:21:43.28:0,43,211	0/0:21,0:21:41.96:0,42,476	0/0:25,0:25:57.15:0,57,653	0/0:28,0:29:33.09:0,33,383	1/1:12,22:34:0.97:966,1,0	0/0:17,0:18:32.93:0,33,369	0/0:11,0:11:21.06:0,21,249	0/1:9,12:21:31.99:484,0,32	0/1:6,9:15:34.99:436,0,35	0/0:22,0:22:48.15:0,48,569	0/0:24,0:25:47.98:0,48,547	0/1:18,1:20:14.65:15,0,290	0/0:21,0:24:50.62:0,51,525	0/0:18,0:18:39.12:0,39,462	0/0:22,0:23:50.95:0,51,557	0/0:18,0:20:53.82:0,54,586	0/0:35,0:36:69.03:0,69,787	1/1:4,7:12:9.93:319,10,0	1/1:6,9:15:27.09:428,27,0	0/1:9,27:34:34.43:927,0,34	0/0:3,0:13:25.57:0,26,126	0/0:27,0:28:53.98:0,54,601	0/0:25,0:25:59.85:0,60,686	0/0:5,0:7:8.69:0,9,64
chr10	77361841	.	GAAAAAAAAAA	G	1445.91	PASS	AB=0.869;AC=10;AF=0.179;AN=56;BaseQRankSum=-2.297;DP=591;FS=6.628;HRun=14;HaplotypeScore=147.8631;InbreedingCoeff=0.6843;MQ=36.85;MQ0=77;MQRankSum=-2.651;QD=19.54;ReadPosRankSum=6.484;VQSLOD=-0.6117;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:50:95.42:0,95,3431	0/0:7,0:6:14.95:0,15,251	0/0:27,0:2:1.55:0,2,5	0/0:43,0:5:7.79:0,8,147	0/0:24,0:27:39.09:0,39,1012	0/0:22,0:19:51.03:0,51,1232	0/0:13,0:12:25.71:0,26,550	0/0:23,0:21:46.17:0,46,673	1/1:10,3:13:29.80:366,30,0	0/0:24,0:24:61.09:0,61,922	0/0:20,0:18:41.79:0,42,1164	0/1:9,3:10:12.14:312,0,12	1/1:12,2:12:28.56:328,29,0	0/0:14,0:10:5.60:0,6,37	0/0:22,0:20:54.06:0,54,1303	0/0:12,0:10:12:0,12,242	0/0:36,0:30:11.89:0,12,88	0/0:30,0:24:35.96:0,36,817	0/0:17,0:12:28.95:0,29,420	0/0:23,0:19:51:0,51,1192	0/0:10,0:9:15.39:0,15,444	1/1:8,3:9:23.73:225,24,0	1/1:7,2:8:23.69:248,24,0	0/1:14,1:10:44.74:133,0,45	0/0:16,0:15:26.88:0,27,276	0/0:26,0:22:42.95:0,43,603	0/0:21,0:16:42.59:0,43,1135	0/0:21,0:17:38.61:0,39,908
chr10	77361855	.	AG	A	5684.73	PASS	AB=0.950;AC=50;AF=0.893;AN=56;BaseQRankSum=0.655;DP=587;FS=4.474;HRun=1;HaplotypeScore=86.8210;InbreedingCoeff=0.0930;MQ=45.80;MQ0=60;MQRankSum=-0.486;QD=10.34;ReadPosRankSum=-1.387;VQSLOD=2.2864;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:55,0:49:99:118,0,426	0/1:6,2:7:5.03:44,0,5	0/0:35,2:5:0.29:0,0,12	0/1:52,0:11:11.07:11,0,40	1/1:26,3:28:54.54:325,55,0	1/1:18,2:20:50.96:396,51,0	1/1:13,2:15:29.95:187,30,0	1/1:9,26:33:67.82:505,68,0	1/1:8,0:8:19.93:107,20,0	1/1:24,4:28:60.63:451,61,0	1/1:16,3:19:46.89:369,47,0	1/1:9,0:8:23.42:151,23,0	1/1:7,0:6:14.60:90,15,0	1/1:3,8:8:2.96:19,3,0	1/1:21,2:21:52.07:447,52,0	1/1:3,11:12:11.89:109,12,0	1/1:6,25:26:2.96:19,3,0	1/1:27,0:21:30.31:209,30,0	1/1:6,12:14:38.57:258,39,0	1/1:15,4:18:41.31:385,41,0	1/1:10,0:10:23.78:185,24,0	1/1:9,0:8:21.29:116,21,0	1/1:11,0:10:17.19:90,17,0	0/1:10,0:7:17.39:31,0,17	1/1:17,1:17:21.66:127,22,0	1/1:6,21:25:49.51:341,50,0	1/1:16,3:16:49.66:381,50,0	1/1:18,0:15:24.96:212,25,0
chr10	77361856	.	GAA	G	688.07	PASS	AB=0.973;AC=22;AF=0.393;AN=56;BaseQRankSum=0.436;DP=604;FS=0.474;HRun=14;HaplotypeScore=115.7307;InbreedingCoeff=-0.3040;MQ=45.53;MQ0=56;MQRankSum=2.156;QD=1.87;ReadPosRankSum=-2.331;VQSLOD=-0.1460;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:49:99:0,101,1131	0/0:9,0:8:1.71:0,2,46	0/0:36,0:5:1.12:0,1,20	0/0:52,0:11:11.01:0,11,101	1/1:28,2:29:16.44:304,16,0	0/1:19,0:19:30.49:30,0,51	0/1:15,0:15:33.25:33,0,54	0/1:33,0:34:4.33:64,0,4	0/1:13,0:13:5.18:5,0,75	0/1:26,1:28:25.59:43,0,26	0/1:19,0:19:36.69:37,0,57	0/1:12,0:11:32.41:32,0,33	0/1:6,0:5:10.68:17,0,11	0/0:10,0:8:1.25:0,1,3	0/1:20,0:21:6.06:6,0,42	0/1:13,0:12:3.85:4,0,9	0/0:31,0:26:2.96:0,3,19	0/0:26,0:21:0.53:0,1,93	0/1:17,0:14:17.61:36,0,18	0/1:19,0:18:7.57:8,0,80	0/1:11,0:10:1.57:2,0,39	0/1:10,0:9:4.55:5,0,18	0/0:16,0:15:9.29:0,9,95	0/1:12,0:10:1.28:1,0,44	1/1:8,10:17:16.76:120,17,0	0/1:26,0:25:28.13:28,0,55	0/1:19,0:17:44.35:51,0,44	0/1:17,0:14:9.76:10,0,91
chr10	77361857	.	AAAAAAAAAAAAAG	A	1734	PASS	AB=0.964;AC=12;AF=0.214;AN=56;BaseQRankSum=0.028;DP=600;FS=3.070;HRun=0;HaplotypeScore=197.6727;InbreedingCoeff=0.7299;MQ=46.96;MQ0=50;MQRankSum=-3.638;QD=16.21;ReadPosRankSum=-2.518;VQSLOD=2.3869;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:49:99:0,110,4364	0/0:9,0:8:17.67:0,18,294	0/1:38,0:6:1.15:1,0,22	0/0:53,0:11:12.30:0,12,243	0/0:29,0:28:58.36:0,58,1179	0/0:20,0:19:55.39:0,55,1454	0/0:15,0:15:31.89:0,32,706	0/0:36,0:35:73.10:0,73,1147	1/1:9,3:12:24.06:396,24,0	0/0:28,0:28:64.35:0,64,1152	0/0:19,0:19:46.39:0,46,1528	1/1:9,3:11:7.36:419,7,0	1/1:5,2:6:11.79:274,12,0	0/0:9,0:8:0.89:0,1,2	0/0:21,0:21:48.63:0,49,1360	0/0:13,0:12:10.59:0,11,280	0/0:31,0:26:3.01:0,3,44	0/0:25,0:21:28.34:0,28,882	0/0:18,0:14:29.86:0,30,472	0/0:19,0:18:43.61:0,44,1313	0/0:11,0:10:24.51:0,25,636	1/1:6,4:9:18.05:319,18,0	1/1:13,2:14:26.74:343,27,0	0/1:12,1:11:65.23:150,0,65	0/0:18,0:17:20.90:0,21,217	0/0:27,0:25:44.01:0,44,814	0/0:21,0:18:52.38:0,52,1457	0/0:17,0:14:32.90:0,33,1115
chr10	77361870	.	G	GA	878.75	PASS	AB=0.848;AC=15;AF=0.268;AN=56;BaseQRankSum=2.426;DP=585;FS=10.046;HRun=13;HaplotypeScore=122.7380;InbreedingCoeff=0.4615;MQ=54.06;MQ0=20;MQRankSum=-4.880;QD=4.83;ReadPosRankSum=-0.256;VQSLOD=1.2514;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:44:65.48:0,65,614	0/0:11,0:10:14.69:0,15,109	0/1:28,1:5:13.90:16,0,14	0/1:35,0:13:24.46:24,0,43	0/0:28,0:28:35.53:0,36,291	0/0:23,0:22:38.28:0,38,317	0/0:17,0:17:29.87:0,30,244	0/0:32,0:34:48.86:0,49,393	1/1:6,9:15:18.67:169,19,0	0/0:28,0:28:40.65:0,41,321	0/0:21,0:21:40.90:0,41,319	0/1:8,6:14:42.41:116,0,42	1/1:3,7:9:15.61:122,16,0	1/1:9,0:9:1.36:2,1,0	0/0:22,0:22:11.25:0,11,97	0/0:16,0:16:14.90:0,15,122	0/0:25,0:25:11.98:0,12,97	0/1:25,0:23:8.18:8,0,70	0/0:19,0:17:32.78:0,33,263	0/0:18,0:18:29.53:0,30,244	0/0:12,0:11:23.87:0,24,194	1/1:4,10:14:28.88:280,29,0	1/1:4,14:17:28.50:256,29,0	0/1:3,9:12:13.12:57,0,13	0/0:15,0:15:2.83:0,3,17	0/0:31,0:31:42.42:0,42,334	0/0:25,0:24:46.18:0,46,377	0/0:12,0:12:5.38:0,5,109
chr10	77362292	.	CACCACCACCACCACCACCACT	C	654.48	PASS	AB=1.000;AC=29;AF=0.659;AN=44;BaseQRankSum=-4.185;DP=179;FS=0.000;HRun=0;HaplotypeScore=83.8078;InbreedingCoeff=0.1272;MQ=66.04;MQ0=8;MQRankSum=-0.273;QD=4.67;ReadPosRankSum=0.160;VQSLOD=1.4625;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:11.49:0,11,495	./.	1/1:12,0:8:2.04:6,2,0	0/1:25,0:21:1.10:1,0,21	./.	0/0:3,0:3:8.98:0,9,146	0/1:6,0:6:12.48:12,0,224	1/1:7,0:4:2.13:5,2,0	1/1:0,10:10:2.16:167,2,0	0/0:5,0:5:3.01:0,3,140	./.	1/1:4,0:4:9:80,9,0	1/1:8,0:8:18:183,18,0	1/1:4,0:4:3:27,3,0	1/1:5,0:5:5.99:49,6,0	./.	0/1:6,0:4:18.97:19,0,60	0/1:10,0:10:14.83:15,0,167	0/1:2,0:2:0:0,0,0	./.	1/1:10,0:8:3.47:28,3,0	1/1:5,0:5:2.99:24,3,0	1/1:3,0:2:5.96:45,6,0	1/1:8,0:8:8.96:71,9,0	0/0:3,0:3:3.01:0,3,85	0/1:8,0:8:39.93:40,0,261	0/1:7,0:7:17.71:18,0,86	./.
chr10	77362304	.	CACCACCACT	C	1356.42	PASS	AB=1.000;AC=43;AF=0.896;AN=48;BaseQRankSum=0.000;DP=151;FS=0.000;HRun=0;HaplotypeScore=40.0932;InbreedingCoeff=0.2916;MQ=51.32;MQ0=10;MQRankSum=-0.920;QD=11.30;ReadPosRankSum=-0.626;VQSLOD=1.3214;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:11:1.10:0,1,210	./.	1/1:6,0:5:2.04:6,2,0	0/0:16,0:12:1.05:0,1,23	./.	1/1:4,0:3:9:78,9,0	1/1:7,0:7:14.92:124,15,0	1/1:7,0:4:1.36:3,1,0	1/1:10,0:10:2.36:66,2,0	1/1:3,2:5:9:80,9,0	1/1:2,0:2:2.90:16,3,0	1/1:6,0:6:15.01:134,15,0	1/1:9,0:9:22.15:169,22,0	1/1:4,0:4:4.25:30,4,0	1/1:5,0:5:8.99:76,9,0	1/1:3,0:3:3:25,3,0	1/1:6,0:4:5.99:48,6,0	1/1:9,0:9:10.51:91,11,0	0/1:1,0:1:0:0,0,0	./.	1/1:8,0:5:6.88:54,7,0	1/1:4,0:4:2.99:24,3,0	1/1:3,0:2:5.96:45,6,0	1/1:7,0:7:14.94:117,15,0	1/1:0,2:2:3.01:88,3,0	1/1:7,0:6:14.97:125,15,0	1/1:5,0:5:8.66:58,9,0	./.
chr10	77363485	.	ACACACACACACACACACACACACACACACACACAC	A	2014.57	PASS	AB=1.000;AC=16;AF=0.296;AN=54;BaseQRankSum=6.036;DP=412;FS=16.047;HRun=0;HaplotypeScore=282.2611;InbreedingCoeff=0.1018;MQ=53.85;MQ0=20;MQRankSum=-4.193;QD=11.01;ReadPosRankSum=1.376;VQSLOD=1.1580;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:28.98:0,29,2247	0/0:4,0:3:3.01:0,3,87	0/0:16,0:13:12.04:0,12,316	0/0:33,0:21:9.03:0,9,167	0/0:17,0:14:15.05:0,15,687	0/1:20,0:20:99:170,0,540	0/0:19,0:18:15.03:0,15,312	0/0:16,0:16:24.08:0,24,652	1/1:13,0:13:3.01:110,3,0	0/0:15,0:13:27.09:0,27,736	0/0:8,0:7:9.03:0,9,243	1/1:8,14:21:9.03:735,9,0	1/1:7,7:14:3.01:266,3,0	0/1:9,0:8:82.77:83,0,157	0/1:15,0:15:99:224,0,352	0/1:8,0:8:99:123,0,165	0/1:22,0:22:83.66:84,0,147	0/1:18,0:16:99:183,0,813	0/0:10,0:10:18.06:0,18,521	0/0:16,0:14:8.92:0,9,203	0/0:17,0:17:20.90:0,21,440	0/0:6,0:6:0:0,0,0	./.	1/1:4,14:18:3.01:38,3,0	0/0:7,0:7:9.03:0,9,362	0/0:13,0:10:15.05:0,15,356	0/1:18,0:18:74.11:74,0,258	0/1:6,0:6:81.10:81,0,292
chr10	77363491	.	ACACACACACACACACACACACACACACAC	A	3036.46	PASS	AB=0.961;AC=19;AF=0.396;AN=48;BaseQRankSum=6.354;DP=390;FS=5.843;HRun=0;HaplotypeScore=219.6220;InbreedingCoeff=-0.0199;MQ=48.48;MQ0=23;MQRankSum=-2.487;QD=14.96;ReadPosRankSum=2.980;VQSLOD=2.2422;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:22.96:0,23,1842	./.	0/0:14,0:11:3.01:0,3,59	./.	0/0:14,0:10:12.01:0,12,297	0/1:20,0:20:34.97:329,0,35	0/0:15,0:14:5.79:0,6,35	0/0:17,0:16:10.26:0,10,103	1/1:13,0:13:3.01:48,3,0	0/0:15,0:12:18.04:0,18,201	0/0:8,0:7:5.89:0,6,39	1/1:21,0:20:9.03:549,9,0	1/1:13,0:13:3.01:204,3,0	0/1:9,0:8:36.05:162,0,36	0/1:12,2:14:25.50:565,0,25	0/1:7,1:8:12.75:218,0,13	1/1:21,0:21:3.77:173,4,0	0/1:16,1:15:99:433,0,436	0/0:10,0:10:12.94:0,13,116	0/1:14,0:12:18.08:50,0,18	0/0:19,0:18:3.46:0,3,25	./.	./.	1/1:18,0:18:3.01:38,3,0	0/0:8,0:8:9.03:0,9,197	0/1:12,0:9:32.74:61,0,33	0/1:16,1:17:33.82:194,0,34	0/1:6,0:6:39.72:163,0,40
chr10	77363493	.	ACACACACACACACACACACACACACAC	A	3841.49	PASS	AB=0.882;AC=33;AF=0.688;AN=48;BaseQRankSum=2.688;DP=382;FS=0.000;HRun=0;HaplotypeScore=199.5227;InbreedingCoeff=0.3706;MQ=46.70;MQ0=25;MQRankSum=-1.697;QD=16.92;ReadPosRankSum=2.284;VQSLOD=2.5989;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:19.95:0,20,1646	./.	0/0:13,0:10:3.01:0,3,42	./.	0/0:13,0:9:9.03:0,9,205	1/1:12,8:20:7.26:422,7,0	1/1:14,0:13:2.99:24,3,0	0/0:18,0:16:0.89:0,1,2	1/1:12,0:12:3.01:34,3,0	0/0:15,0:12:0:0,0,0	1/1:8,0:7:2.99:24,3,0	1/1:21,0:20:9.03:507,9,0	1/1:13,0:13:3.01:190,3,0	1/1:8,1:8:3.01:210,3,0	1/1:13,1:14:21.06:664,21,0	1/1:8,0:8:5.67:214,6,0	1/1:17,2:19:5.71:248,6,0	0/1:13,2:13:99:519,0,392	1/1:10,0:10:2.05:24,2,0	1/1:13,0:11:2.74:93,3,0	0/0:19,0:18:0.47:0,0,1	./.	./.	1/1:17,0:17:3.01:38,3,0	0/0:10,0:9:7.36:0,7,105	1/1:11,0:8:6.02:152,6,0	1/1:16,1:17:6.02:248,6,0	1/1:5,1:6:6:233,6,0
chr10	77363519	.	AC	A	2863.39	PASS	AB=0.688;AC=47;AF=0.870;AN=54;BaseQRankSum=4.151;DP=324;FS=6.160;HRun=2;HaplotypeScore=58.5714;InbreedingCoeff=0.4421;MQ=37.01;MQ0=58;MQRankSum=-3.976;QD=12.34;ReadPosRankSum=2.653;VQSLOD=2.3256;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:23:32.59:0,33,396	1/1:1,2:2:6.02:76,6,0	0/0:26,0:11:33.01:0,33,369	0/0:35,1:13:36.09:0,36,411	1/1:5,7:3:6.02:76,6,0	1/1:9,1:10:0.84:43,1,0	1/1:6,5:7:15.03:170,15,0	1/1:6,6:6:18.06:229,18,0	1/1:1,7:7:21.07:267,21,0	1/1:5,2:1:3.01:38,3,0	1/1:2,4:4:2.98:21,3,0	1/1:15,0:14:8.55:63,9,0	1/1:7,0:7:2.37:8,2,0	1/1:5,2:4:5.50:41,6,0	1/1:6,6:10:18.03:226,18,0	1/1:1,2:3:5.50:47,6,0	1/1:5,10:12:23.69:253,24,0	1/1:7,13:17:5.88:535,6,0	./.	0/1:6,5:7:3.81:89,0,4	1/1:7,11:12:15.05:190,15,0	1/1:0,4:3:9.03:114,9,0	1/1:1,6:5:6.02:77,6,0	1/1:14,1:15:3.01:38,3,0	1/1:4,4:5:5.90:56,6,0	1/1:5,5:7:3.48:209,3,0	1/1:2,4:5:5.50:47,6,0	1/1:1,4:4:8.96:94,9,0
chr10	77363596	.	GGT	G	11826.63	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=6.015;DP=447;FS=3.694;HRun=0;HaplotypeScore=70.3558;InbreedingCoeff=0.9692;MQ=79.47;MQ0=5;MQRankSum=-2.298;QD=36.96;ReadPosRankSum=3.099;VQSLOD=6.8462;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.29:0,84,1484	1/1:1,5:6:15.05:213,15,0	0/0:11,0:11:18.85:0,19,398	0/0:20,0:20:18.46:0,18,732	1/1:0,11:11:33.11:472,33,0	1/1:1,12:12:36.12:516,36,0	1/1:1,20:21:51.17:731,51,0	1/1:5,14:19:42.11:579,42,0	0/0:14,0:14:36.10:0,36,619	1/1:0,22:22:66.22:942,66,0	1/1:6,13:19:51.17:729,51,0	0/0:12,0:12:27.07:0,27,462	0/0:7,0:7:15.05:0,15,275	1/1:1,7:8:18.06:258,18,0	1/1:1,16:17:48.16:688,48,0	1/1:0,6:6:15.05:215,15,0	1/1:1,22:23:60.20:859,60,0	1/1:1,31:32:87.29:1243,87,0	1/1:3,23:25:69.22:970,69,0	1/1:2,9:10:21.03:278,21,0	1/1:2,34:35:84.28:1203,84,0	0/0:2,0:2:6.02:0,6,110	0/0:8,0:7:21.07:0,21,385	0/0:25,0:25:66.21:0,66,1178	1/1:0,7:7:18.06:258,18,0	1/1:1,16:16:48.16:687,48,0	1/1:1,17:18:48.16:687,48,0	1/1:1,7:8:21.07:301,21,0
chr10	77363597	.	GT	G	1575.87	PASS	AB=0.974;AC=36;AF=0.643;AN=56;BaseQRankSum=11.458;DP=445;FS=2.302;HRun=1;HaplotypeScore=97.8776;InbreedingCoeff=0.8179;MQ=78.79;MQ0=4;MQRankSum=-2.728;QD=4.97;ReadPosRankSum=4.571;VQSLOD=0.8471;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.20:0,87,1287	1/1:6,0:6:10.92:33,11,0	0/0:11,0:11:32.96:0,33,435	0/0:20,0:20:31.39:0,31,673	1/1:11,0:11:24.24:76,24,0	1/1:14,0:13:29.64:109,30,0	1/1:21,0:21:17.02:95,17,0	0/1:17,1:18:46.23:46,0,99	0/0:13,0:13:36.09:0,36,527	1/1:22,0:22:49.16:163,49,0	1/1:14,4:18:37.86:120,38,0	0/0:12,0:12:27.09:0,27,431	0/0:7,0:7:15.05:0,15,239	1/1:8,0:8:13.32:42,13,0	1/1:17,0:17:35.52:112,36,0	1/1:6,0:6:11.10:35,11,0	1/1:23,0:23:27.52:120,28,0	1/1:31,0:31:63.72:200,64,0	0/1:26,0:25:8.49:106,0,8	1/1:10,0:10:16.29:62,16,0	1/1:36,0:35:29.69:160,30,0	0/0:3,0:3:9.02:0,9,121	0/0:8,0:7:21.07:0,21,336	0/0:25,0:25:66.21:0,66,1029	1/1:7,0:7:13.32:41,13,0	1/1:17,0:16:35.34:111,35,0	1/1:18,0:18:35.52:112,36,0	1/1:8,0:8:15.54:49,16,0
chr10	77363599	.	GT	G	755.05	PASS	AB=0.981;AC=35;AF=0.625;AN=56;BaseQRankSum=12.741;DP=434;FS=2.904;HRun=1;HaplotypeScore=97.2105;InbreedingCoeff=0.7282;MQ=77.26;MQ0=4;MQRankSum=-3.882;QD=2.45;ReadPosRankSum=4.766;VQSLOD=-0.3898;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.29:0,90,1410	1/1:5,0:5:7.47:19,7,0	0/0:10,0:10:29.95:0,30,397	0/0:20,0:20:47.55:0,48,686	1/1:11,0:11:16.79:44,17,0	1/1:15,0:14:7.88:35,8,0	1/1:20,0:20:26.43:68,26,0	0/1:16,1:17:25.42:25,0,28	0/0:13,0:13:39.13:0,39,613	0/1:23,0:23:1.97:49,0,2	1/1:13,4:17:27.13:72,27,0	0/0:11,0:11:27.07:0,27,405	0/0:5,0:5:15.05:0,15,240	1/1:7,0:7:9.33:24,9,0	1/1:17,0:17:3.06:40,3,0	1/1:6,0:6:7.77:20,8,0	1/1:23,0:23:10.25:57,10,0	1/1:31,0:31:44.01:114,44,0	1/1:23,0:23:33.90:88,34,0	0/1:9,0:9:3.71:12,0,4	1/1:36,0:35:43.54:113,44,0	0/0:3,0:3:9.03:0,9,144	0/0:8,0:7:21.07:0,21,336	0/0:26,0:26:66.23:0,66,1054	1/1:7,0:7:9.33:24,9,0	1/1:17,0:16:24.88:64,25,0	1/1:17,0:17:24.88:64,25,0	1/1:7,0:7:10.88:28,11,0
chr10	77363740	.	AAT	A	12110.67	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=1.310;DP=543;FS=1.901;HRun=0;HaplotypeScore=62.6035;InbreedingCoeff=0.7471;MQ=70.00;MQ0=13;MQRankSum=1.757;QD=26.85;ReadPosRankSum=3.986;VQSLOD=5.9103;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1560	1/1:0,9:9:21.07:296,21,0	0/0:59,0:13:16.91:0,17,196	0/1:58,0:16:11.42:11,0,172	1/1:0,24:24:68.94:853,69,0	1/1:0,16:16:27.09:380,27,0	1/1:0,9:9:15.05:207,15,0	1/1:0,33:33:96.04:1117,96,0	1/1:0,14:14:30.10:422,30,0	1/1:0,13:13:36.12:495,36,0	1/1:0,11:11:30.82:377,31,0	1/1:0,15:15:39.13:550,39,0	1/1:0,13:13:20.95:295,21,0	1/1:0,7:6:12.04:170,12,0	1/1:0,14:14:24.08:339,24,0	1/1:1,10:11:14.53:212,15,0	1/1:0,26:26:54.18:763,54,0	1/1:0,26:26:66.22:932,66,0	1/1:1,22:23:19:788,19,0	1/1:0,10:11:32.79:346,33,0	1/1:0,14:14:18.06:255,18,0	1/1:0,7:7:20.96:247,21,0	1/1:0,7:7:11.93:170,12,0	1/1:0,9:9:18.06:255,18,0	1/1:0,16:16:39.13:551,39,0	1/1:0,22:22:66.03:790,66,0	1/1:0,33:33:69.23:953,69,0	1/1:0,10:10:24.08:339,24,0
chr10	77363949	.	AG	A	4487.78	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.339;DP=603;FS=4.023;HRun=1;HaplotypeScore=57.8870;InbreedingCoeff=0.9955;MQ=93.89;MQ0=0;MQRankSum=-2.249;QD=36.19;ReadPosRankSum=3.059;VQSLOD=5.0730;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,2177	0/0:10,0:10:27.05:0,27,383	0/0:33,0:33:92.02:0,92,1421	0/0:22,0:22:63.18:0,63,954	0/0:22,0:22:66.23:0,66,1054	0/0:11,0:11:33.11:0,33,527	0/0:21,0:21:60.20:0,60,957	0/0:23,0:23:69.23:0,69,1083	1/1:0,19:19:51.17:713,51,0	0/0:31,0:31:93.32:0,93,1484	0/0:19,0:19:57.19:0,57,909	1/1:0,27:27:69.23:965,69,0	1/1:0,21:21:51.17:713,51,0	0/0:19,0:19:57.17:0,57,880	0/0:31,0:31:93.29:0,93,1440	0/0:31,1:32:54.45:0,54,1398	0/0:21,0:21:63.21:0,63,1004	0/0:11,0:11:30.08:0,30,454	0/0:22,0:22:63.20:0,63,967	0/0:22,0:22:66.14:0,66,1001	0/0:10,0:10:30.09:0,30,456	1/1:0,16:16:48.16:671,48,0	1/1:0,17:17:42.14:586,42,0	1/1:0,24:24:60.20:839,60,0	0/0:7,0:7:21.07:0,21,336	0/0:30,0:30:90.31:0,90,1438	0/0:29,0:29:87.27:0,87,1356	0/0:5,0:5:15.03:0,15,215
chr10	77364253	.	AG	A	4306.03	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-8.271;DP=703;FS=11.050;HRun=6;HaplotypeScore=120.1738;InbreedingCoeff=0.9997;MQ=88.37;MQ0=0;MQRankSum=-0.781;QD=26.42;ReadPosRankSum=3.623;VQSLOD=3.5491;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,108,1409	0/0:18,0:18:45.14:0,45,578	0/0:25,0:25:54.14:0,54,661	0/0:34,0:33:84.06:0,84,984	0/0:25,0:25:66.19:0,66,836	0/0:24,0:24:63.16:0,63,797	0/0:27,0:27:75.22:0,75,970	0/0:28,0:28:75.23:0,75,982	1/1:0,27:27:75.19:806,75,0	0/0:36,0:36:99:0,99,1297	0/0:15,0:15:36.12:0,36,468	1/1:4,27:31:84.21:901,84,0	1/1:1,21:22:57.14:611,57,0	0/0:17,0:17:51.16:0,51,649	0/0:31,0:31:87.27:0,87,1122	0/0:22,0:22:63.20:0,63,816	0/0:21,0:21:51.17:0,51,669	0/0:12,0:12:30.10:0,30,395	0/0:23,0:23:63.20:0,63,826	0/0:19,0:19:45.15:0,45,592	0/0:39,0:39:99:0,111,1458	1/1:5,24:28:63.14:668,63,0	1/1:2,25:22:51.13:547,51,0	1/1:1,26:27:72.18:774,72,0	0/0:10,0:10:30.10:0,30,394	0/0:25,0:25:69.18:0,69,887	0/0:33,0:33:99:0,99,1282	0/0:15,0:15:39.13:0,39,513
chr10	77364259	.	GT	G	1007.36	PASS	AB=0.947;AC=11;AF=0.196;AN=56;BaseQRankSum=0.499;DP=713;FS=12.584;HRun=1;HaplotypeScore=127.7428;InbreedingCoeff=0.8409;MQ=84.55;MQ0=0;MQRankSum=2.438;QD=5.89;ReadPosRankSum=5.012;VQSLOD=-0.6615;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1782	0/0:18,0:18:51.08:0,51,725	0/0:21,0:21:49.47:0,49,760	0/0:31,0:30:77.10:0,77,1081	0/0:25,0:25:66.21:0,66,961	0/0:25,0:25:75.12:0,75,1015	0/0:26,0:26:78.25:0,78,1162	0/0:27,0:27:78.24:0,78,1174	1/1:30,0:30:8.40:195,8,0	0/0:37,0:37:99:0,102,1487	0/0:15,0:15:42.07:0,42,566	0/1:34,2:36:61.55:245,0,62	1/1:23,0:23:17.85:185,18,0	0/0:17,0:17:51.15:0,51,725	0/0:29,0:29:87.29:0,87,1315	0/0:24,0:24:69.18:0,69,970	0/0:20,0:20:57.16:0,57,825	0/0:12,0:12:36.09:0,36,506	0/0:27,0:27:81.21:0,81,1104	0/0:18,0:18:53.49:0,53,730	0/0:39,0:39:99:0,117,1734	1/1:26,1:26:5.90:178,6,0	1/1:26,0:21:41.88:182,42,0	1/1:28,1:28:16.36:192,16,0	0/0:11,0:11:33.09:0,33,456	0/0:28,0:28:78.22:0,78,1084	0/0:33,0:33:99:0,99,1464	0/0:14,0:14:42.13:0,42,618
chr10	77364507	.	CTCATTCAT	C	15647.22	PASS	AB=0.830;AC=48;AF=0.857;AN=56;BaseQRankSum=5.863;DP=639;FS=3.284;HRun=0;HaplotypeScore=213.3539;InbreedingCoeff=0.5864;MQ=52.08;MQ0=6;MQRankSum=-3.487;QD=27.94;ReadPosRankSum=3.390;VQSLOD=4.0274;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:66.14:0,66,2428	1/1:1,9:10:18.06:458,18,0	0/0:28,0:23:15.05:0,15,219	0/0:20,0:16:5.73:0,6,48	1/1:21,7:28:33.04:710,33,0	1/1:14,11:23:42.14:979,42,0	1/1:10,10:20:3.01:52,3,0	1/1:32,0:27:24.48:304,24,0	1/1:8,0:32:52.93:814,53,0	1/1:22,10:32:57.17:1198,57,0	1/1:14,4:18:21.06:425,21,0	1/1:3,0:23:33.11:496,33,0	1/1:18,0:24:47.10:573,47,0	1/1:22,13:35:72.20:1516,72,0	1/1:21,9:29:39.13:903,39,0	1/1:13,12:25:51.17:1173,51,0	0/1:9,1:10:8.59:171,0,9	1/1:14,3:16:24.04:430,24,0	0/1:12,6:16:24.05:465,0,24	1/1:11,8:19:27.09:618,27,0	1/1:16,1:17:3.01:74,3,0	1/1:17,0:20:35.27:393,35,0	1/1:8,0:13:30.42:366,30,0	1/1:1,0:24:0.66:1,1,0	1/1:19,8:27:40.93:895,41,0	1/1:17,8:25:54.16:1037,54,0	1/1:15,13:28:63.03:1296,63,0	1/1:7,1:8:12.04:298,12,0
chr10	77364527	.	T	TCAC	1738.28	PASS	AB=0.931;AC=8;AF=0.143;AN=56;BaseQRankSum=1.498;DP=622;FS=7.346;HRun=0;HaplotypeScore=230.4344;InbreedingCoeff=0.4167;MQ=40.76;MQ0=9;MQRankSum=-3.185;QD=12.97;ReadPosRankSum=4.644;VQSLOD=2.1982;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:79.51:0,80,1444	0/0:11,0:11:14.88:0,15,103	0/0:22,0:15:43.36:0,43,707	0/0:14,0:7:19.59:0,20,270	0/0:25,0:25:49.90:0,50,477	0/0:23,0:21:38.63:0,39,273	0/0:15,0:15:15:0,15,159	0/0:29,0:26:70.42:0,70,981	1/1:28,4:32:51.24:556,51,0	0/0:34,0:33:84.68:0,85,979	0/0:20,0:20:48.36:0,48,539	1/1:22,2:22:18.22:349,18,0	0/1:19,3:22:93.37:454,0,93	0/0:32,0:31:85.06:0,85,815	0/0:30,0:29:58.98:0,59,653	0/0:26,0:26:57.22:0,57,676	0/0:10,0:10:17.05:0,17,126	0/0:14,0:13:26.78:0,27,236	0/0:18,0:16:38.87:0,39,483	0/0:23,0:23:18.94:0,19,449	0/0:21,0:21:23.46:0,23,295	0/1:13,3:16:22.21:291,0,22	0/1:14,0:14:24.55:223,0,25	0/1:25,0:23:11:11,0,14	0/0:29,0:29:82:0,82,847	0/0:29,0:29:63.73:0,64,645	0/0:29,0:29:65.41:0,65,666	0/0:6,0:6:15.16:0,15,143
chr10	77364533	.	CAT	C	265.49	PASS	AB=0.925;AC=15;AF=0.268;AN=56;BaseQRankSum=10.499;DP=617;FS=9.713;HRun=0;HaplotypeScore=223.2583;InbreedingCoeff=-0.1180;MQ=40.13;MQ0=9;MQRankSum=-6.702;QD=0.81;ReadPosRankSum=11.765;VQSLOD=0.0062;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.21:0,81,1499	1/1:12,0:12:12.06:37,12,0	0/0:18,0:11:33.11:0,33,526	0/0:14,0:6:8.98:0,9,99	0/1:23,2:25:16.75:17,0,265	1/1:23,2:24:2.33:42,2,0	0/0:19,0:18:13.30:0,13,193	0/0:28,0:25:54.33:0,54,782	0/1:34,0:33:23.92:24,0,257	0/1:29,3:31:59.13:59,0,389	0/0:21,1:22:4.34:0,4,388	0/1:27,0:23:2.73:3,0,152	0/0:19,0:19:13.46:0,13,483	0/1:29,2:29:71.58:72,0,175	0/1:31,1:31:36.88:37,0,268	0/1:24,2:26:40.20:40,0,183	0/0:9,0:9:6.17:0,6,68	0/0:12,0:11:0.51:0,1,61	0/0:17,0:15:1.74:0,2,338	0/1:24,0:24:1.86:2,0,287	0/0:18,1:19:9.31:0,9,211	0/0:16,0:16:20.14:0,20,301	0/0:14,0:14:24.89:0,25,351	0/0:26,0:23:6.02:0,6,91	0/0:24,4:28:4.29:0,4,471	0/1:22,3:25:23.27:23,0,283	0/1:25,3:28:47.86:48,0,168	0/1:4,3:7:10.75:11,0,113
chr10	77364571	.	T	TTCAC	1986.69	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.857;DP=706;FS=6.352;HRun=0;HaplotypeScore=277.2923;InbreedingCoeff=0.7519;MQ=37.67;MQ0=3;MQRankSum=-6.458;QD=33.11;ReadPosRankSum=1.787;VQSLOD=2.8279;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:70.33:0,70,888	0/0:17,0:17:25.62:0,26,179	0/0:23,0:20:39.79:0,40,569	0/0:24,0:19:36.07:0,36,498	1/1:20,9:29:32.66:738,33,0	0/0:26,0:25:41.46:0,41,358	0/0:26,0:25:30.25:0,30,404	0/0:27,0:27:38.63:0,39,459	0/0:30,0:26:38.44:0,38,192	0/0:41,0:40:84.41:0,84,942	0/0:25,0:25:39.51:0,40,490	0/0:24,0:20:6.50:0,7,80	0/0:29,0:27:15.71:0,16,158	0/0:38,0:36:69.40:0,69,707	0/0:37,0:37:65.78:0,66,637	0/0:35,0:35:60.16:0,60,639	0/0:14,0:14:5.22:0,5,83	0/0:15,0:14:26.76:0,27,261	0/0:14,0:14:21.28:0,21,430	0/0:21,0:21:41.51:0,42,437	0/0:19,0:19:3.85:0,4,203	0/0:23,0:21:7.98:0,8,66	0/0:22,0:20:13.25:0,13,90	0/0:20,0:15:5.96:0,6,44	1/1:25,6:31:77.85:1369,78,0	0/0:32,0:31:69.90:0,70,823	0/0:32,0:31:55.09:0,55,648	0/0:5,0:5:15:0,15,194
chr10	77364583	.	TTCAC	T	747.31	PASS	AB=0.823;AC=11;AF=0.196;AN=56;BaseQRankSum=-3.309;DP=719;FS=1.318;HRun=0;HaplotypeScore=270.0120;InbreedingCoeff=0.0052;MQ=36.83;MQ0=6;MQRankSum=-1.935;QD=3.26;ReadPosRankSum=-4.717;VQSLOD=1.2155;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:54.81:0,55,1380	0/0:17,0:17:27.09:0,27,627	0/0:19,0:15:39.12:0,39,826	0/0:20,0:14:36.08:0,36,749	0/0:34,0:34:39.62:0,40,750	0/0:26,0:25:45:0,45,950	0/0:31,0:27:39.13:0,39,900	0/0:24,0:23:54.41:0,54,919	0/1:22,6:24:64.29:335,0,64	0/0:45,0:44:99:0,104,2520	0/0:30,0:30:65.69:0,66,1230	0/1:19,5:20:17.56:107,0,18	0/1:9,19:26:99:100,0,103	0/0:38,0:36:80.95:0,81,1570	0/0:36,0:36:69.15:0,69,1601	0/0:33,0:33:63.12:0,63,1349	0/1:15,0:15:1.80:2,0,269	0/1:17,0:16:9.51:10,0,519	0/0:13,0:13:32.62:0,33,746	0/0:30,0:30:68.72:0,69,1191	0/1:19,0:19:36.77:37,0,320	0/1:6,19:23:18.95:77,0,19	0/1:7,15:20:32.80:33,0,45	1/1:21,2:18:15:183,15,0	0/1:28,0:28:12.72:13,0,888	0/0:34,0:33:89.95:0,90,1886	0/0:31,0:30:75.07:0,75,1620	0/0:7,0:7:21.07:0,21,481
chr10	77364612	.	TCA	T	8431	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=10.591;DP=695;FS=1.305;HRun=0;HaplotypeScore=172.5703;InbreedingCoeff=0.7187;MQ=40.12;MQ0=10;MQRankSum=-11.371;QD=17.03;ReadPosRankSum=5.478;VQSLOD=5.0779;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.24:0,69,1270	1/1:14,0:14:30.01:299,30,0	0/0:14,0:9:27.06:0,27,463	0/0:10,0:6:18.06:0,18,347	1/1:30,3:33:5.68:648,6,0	1/1:24,0:24:38.97:337,39,0	1/1:28,0:25:23.82:202,24,0	1/1:25,0:22:16.12:522,16,0	0/0:25,0:21:1.73:0,2,648	1/1:44,0:44:99:1083,106,0	1/1:29,0:29:53.88:505,54,0	0/0:24,0:20:45.15:0,45,849	0/0:27,0:25:30:0,30,558	1/1:32,0:30:62.99:596,63,0	1/1:41,0:41:54.02:531,54,0	1/1:30,0:29:39.01:381,39,0	0/1:20,0:20:10.48:127,0,10	0/1:20,0:20:99:160,0,109	1/1:3,4:7:13.10:206,13,0	1/1:30,0:30:71.78:679,72,0	0/1:22,0:22:57.63:88,0,58	0/0:29,0:27:34.36:0,34,606	0/0:22,0:20:18:0,18,299	0/0:22,0:17:36.12:0,36,692	1/1:16,5:21:54.06:611,54,0	1/1:30,0:30:69.33:763,69,0	1/1:35,0:34:17.08:525,17,0	1/1:9,0:9:17.99:169,18,0
chr10	77364613	.	CACTCAT	C	21181.34	PASS	AB=0.659;AC=36;AF=0.643;AN=56;BaseQRankSum=4.708;DP=682;FS=3.493;HRun=0;HaplotypeScore=155.8746;InbreedingCoeff=0.6339;MQ=40.26;MQ0=10;MQRankSum=-9.184;QD=41.94;ReadPosRankSum=4.879;VQSLOD=4.8884;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:79.43:0,79,2296	1/1:0,14:14:33.11:780,33,0	0/0:14,0:9:27.07:0,27,601	0/0:10,0:6:18.06:0,18,446	1/1:4,26:30:3.03:1616,3,0	1/1:0,24:24:39.13:996,39,0	1/1:1,22:20:24.08:600,24,0	0/1:3,21:22:51.74:1159,0,52	0/1:24,1:21:27.96:28,0,1140	1/1:0,44:44:99:2767,120,0	1/1:0,29:29:54.19:1304,54,0	0/0:24,0:20:45.15:0,45,1458	0/0:27,0:25:30.10:0,30,821	1/1:2,30:30:63.22:1575,63,0	1/1:0,39:39:54.19:1374,54,0	1/1:1,27:27:39.08:992,39,0	1/1:2,18:20:2:337,2,0	0/1:4,16:20:99:475,0,173	1/1:6,0:6:18.05:298,18,0	1/1:0,29:29:72.25:1694,72,0	0/1:6,17:23:99:206,0,113	0/0:30,0:28:37.37:0,37,1049	0/0:22,0:20:21.05:0,21,572	0/0:21,0:16:36.12:0,36,1177	1/1:5,16:21:54.18:1220,54,0	1/1:1,30:30:87.26:1850,87,0	1/1:1,34:35:41.46:1482,41,0	1/1:0,7:7:18.06:429,18,0
chr10	77365194	.	CT	C	401.02	PASS	AB=0.859;AC=13;AF=0.241;AN=54;BaseQRankSum=1.933;DP=284;FS=1.852;HRun=13;HaplotypeScore=68.4134;InbreedingCoeff=0.5755;MQ=54.96;MQ0=3;MQRankSum=-0.812;QD=5.08;ReadPosRankSum=2.207;VQSLOD=2.1343;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:7.56:0,8,99	0/0:5,0:6:11.81:0,12,91	0/0:1,0:1:0:0,0,0	./.	0/1:10,1:16:8.30:8,0,35	0/0:10,0:10:14.90:0,15,119	0/0:6,0:6:11.97:0,12,103	0/0:19,0:21:38.98:0,39,316	1/1:4,5:9:14.85:106,15,0	0/0:9,0:9:12.01:0,12,111	0/1:9,1:10:4.19:4,0,93	1/1:2,9:10:14.91:109,15,0	1/1:2,5:7:14.85:109,15,0	0/0:3,0:3:6.01:0,6,58	0/0:10,0:11:26.79:0,27,229	0/0:8,0:8:17.93:0,18,153	0/0:21,0:21:39.02:0,39,361	0/0:11,0:11:5.32:0,5,165	0/0:13,0:12:12.01:0,12,113	0/0:11,0:11:21.92:0,22,206	0/0:4,0:4:5.91:0,6,45	0/1:5,3:8:15.33:49,0,15	1/1:3,6:9:11:79,11,0	1/1:3,6:9:14.83:104,15,0	0/0:8,0:14:17.27:0,17,96	0/0:13,0:14:31.10:0,31,267	0/0:9,1:10:2.11:0,2,114	0/0:9,0:10:26.80:0,27,229
chr10	77365769	.	T	TAA	96.53	PASS	AC=8;AF=1.00;AN=8;DP=41;FS=0.000;HRun=3;HaplotypeScore=16.1328;MQ=11.73;MQ0=30;QD=16.09;VQSLOD=0.4423;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,1:1:3.01:52,3,0	./.	./.	1/1:1,1:1:2.97:20,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:1,1:2:3.01:38,3,0	./.	./.	./.	./.	1/1:0,1:1:3.01:53,3,0	./.	./.	./.
chr10	77365787	.	ATT	A	146.84	PASS	AC=12;AF=1.000;AN=12;DP=34;FS=0.000;HRun=4;HaplotypeScore=19.9197;MQ=18.04;MQ0=17;QD=8.64;VQSLOD=-0.3212;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,0:1:2.80:13,3,0	./.	./.	1/1:3,2:4:8.05:48,8,0	./.	./.	./.	./.	1/1:1,1:1:3.01:30,3,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:3,1:1:3:29,3,0	1/1:0,2:2:6.01:59,6,0	./.	./.	./.	./.	1/1:2,1:3:8.20:37,8,0	./.	./.	./.
chr10	77365789	.	T	TA	337.01	PASS	AC=20;AF=0.909;AN=22;BaseQRankSum=-1.519;DP=40;FS=0.000;HRun=0;HaplotypeScore=21.4836;InbreedingCoeff=0.0931;MQ=20.58;MQ0=16;MQRankSum=-1.519;QD=9.91;ReadPosRankSum=-1.519;VQSLOD=2.4821;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:1,0:1:1.82:0,2,5	./.	./.	1/1:3,3:5:7.14:94,7,0	./.	./.	1/1:4,0:1:2.97:20,3,0	./.	1/1:2,0:1:2.80:13,3,0	./.	./.	./.	./.	./.	1/1:1,0:1:2.96:19,3,0	1/1:4,0:2:2.94:18,3,0	./.	1/1:3,1:1:3.01:46,3,0	1/1:3,0:3:8.48:42,8,0	./.	./.	./.	./.	1/1:1,2:3:6.49:94,6,0	1/1:1,0:1:2.96:19,3,0	1/1:4,2:2:3.01:47,3,0	./.
chr10	77365909	.	AGGCC	A	2325.95	PASS	AC=36;AF=0.900;AN=40;BaseQRankSum=-2.857;DP=68;FS=25.752;HRun=0;HaplotypeScore=26.9835;InbreedingCoeff=0.3007;MQ=59.15;MQ0=3;MQRankSum=-2.898;QD=44.73;ReadPosRankSum=1.731;VQSLOD=1.7428;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:4:12.04:216,12,0	./.	0/0:7,0:1:3.01:0,3,59	0/0:7,0:3:6.02:0,6,83	1/1:0,2:2:6.02:107,6,0	1/1:0,7:6:18.06:322,18,0	1/1:0,5:5:12.04:215,12,0	1/1:1,2:3:6.02:108,6,0	1/1:0,1:1:3.01:54,3,0	1/1:0,1:1:3.01:54,3,0	./.	./.	1/1:0,1:1:3.01:54,3,0	1/1:0,2:2:6.02:108,6,0	1/1:0,5:5:15.05:271,15,0	1/1:1,4:5:12.04:216,12,0	./.	1/1:1,1:2:3.90:57,4,0	./.	1/1:0,3:3:9.03:162,9,0	./.	./.	1/1:0,1:1:3.01:54,3,0	1/1:0,1:1:3.01:55,3,0	1/1:0,1:1:3.01:54,3,0	1/1:1,2:3:6.02:108,6,0	1/1:1,4:5:12.04:215,12,0	./.
chr10	77365969	.	CA	C	736.36	PASS	AC=34;AF=0.850;AN=40;BaseQRankSum=3.630;DP=106;FS=6.803;HRun=1;HaplotypeScore=34.4121;InbreedingCoeff=0.5311;MQ=81.57;MQ0=0;MQRankSum=-5.139;QD=10.09;ReadPosRankSum=0.086;VQSLOD=0.9865;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:17.98:0,18,204	1/1:1,0:1:2.50:9,2,0	0/0:8,0:6:18.01:0,18,184	0/0:14,0:12:28.55:0,29,335	./.	1/1:2,1:3:8.63:48,9,0	1/1:4,4:8:20.71:138,21,0	1/1:9,0:9:13.79:79,14,0	1/1:2,0:2:5.92:39,6,0	./.	1/1:4,1:5:2.37:8,2,0	./.	1/1:1,0:1:2.98:21,3,0	1/1:4,1:5:0.14:60,0,0	1/1:5,3:8:8.50:81,9,0	1/1:2,1:3:8.82:55,9,0	1/1:9,4:13:20.40:133,20,0	1/1:1,1:2:5.94:42,6,0	1/1:3,2:5:5.96:47,6,0	1/1:1,0:1:2.88:15,3,0	./.	./.	./.	./.	./.	1/1:2,0:2:2.84:14,3,0	1/1:3,1:4:11.76:74,12,0	1/1:1,0:1:1.55:4,2,0
chr10	77365975	.	CA	C	636.03	PASS	AB=1.000;AC=29;AF=0.806;AN=36;BaseQRankSum=3.571;DP=111;FS=9.457;HRun=1;HaplotypeScore=35.8003;InbreedingCoeff=0.5626;MQ=67.77;MQ0=0;MQRankSum=-5.217;QD=8.96;ReadPosRankSum=-1.353;VQSLOD=-0.2532;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:21.05:0,21,264	1/1:0,1:1:1.82:5,2,0	0/0:7,1:5:9.02:0,9,113	0/0:14,1:13:28.38:0,28,326	./.	1/1:2,1:3:5.52:27,6,0	1/1:5,4:9:20.68:140,21,0	0/1:6,0:6:0.70:6,0,1	1/1:1,0:1:2.96:19,3,0	./.	1/1:4,2:6:2.04:6,2,0	./.	./.	1/1:4,1:5:8.61:54,9,0	1/1:2,3:5:11.85:77,12,0	1/1:2,1:3:8.83:57,9,0	1/1:11,3:14:24.96:164,25,0	1/1:3,1:2:5.93:41,6,0	1/1:3,2:5:5.96:49,6,0	./.	./.	./.	./.	./.	./.	1/1:2,0:2:2.97:20,3,0	1/1:5,1:6:14.73:92,15,0	1/1:1,0:1:0.89:2,1,0
chr10	77365980	.	CA	C	350.26	PASS	AC=28;AF=0.778;AN=36;BaseQRankSum=2.704;DP=113;FS=4.531;HRun=1;HaplotypeScore=30.3124;InbreedingCoeff=0.5362;MQ=67.25;MQ0=0;MQRankSum=-4.585;QD=5.15;ReadPosRankSum=-3.644;VQSLOD=-0.7420;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:21.07:0,21,292	1/1:1,0:1:1.82:5,2,0	0/0:9,0:5:11.96:0,12,110	0/0:13,0:11:28.61:0,29,286	./.	1/1:2,0:2:2.80:13,3,0	1/1:6,2:8:13.47:73,13,0	1/1:7,0:6:4.46:21,4,0	1/1:1,0:1:2.97:20,3,0	./.	1/1:4,1:5:4.77:24,5,0	./.	./.	1/1:5,0:5:5.70:31,6,0	1/1:5,0:5:5.92:39,6,0	1/1:3,0:3:7.31:36,7,0	1/1:15,1:16:17.79:93,18,0	1/1:5,0:3:4.52:23,5,0	1/1:2,1:3:3.87:24,4,0	./.	0/0:3,1:4:0:0,0,0	./.	./.	./.	./.	1/1:2,0:2:4.50:16,4,0	1/1:5,0:5:10.98:55,11,0	./.
chr10	77366303	.	CAT	C	3796.12	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.422;DP=477;FS=1.436;HRun=0;HaplotypeScore=61.1342;InbreedingCoeff=0.9561;MQ=85.02;MQ0=0;MQRankSum=-1.412;QD=42.18;ReadPosRankSum=4.477;VQSLOD=5.3181;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.24:0,75,1405	0/0:4,0:4:12.04:0,12,231	0/0:17,0:17:41.24:0,41,791	0/0:17,0:17:23.64:0,24,449	0/0:18,0:17:45.15:0,45,867	0/0:21,0:21:63.18:0,63,1148	0/0:12,0:12:36.09:0,36,611	0/0:34,0:34:99:0,102,1804	1/1:0,21:21:60.20:917,60,0	0/0:15,0:15:45.13:0,45,775	0/0:13,0:13:36.11:0,36,640	1/1:0,29:29:81.28:1237,81,0	1/1:0,17:17:45.15:687,45,0	0/0:13,0:13:39.13:0,39,753	0/0:21,0:21:63.22:0,63,1216	0/0:22,0:22:66.21:0,66,1232	0/0:21,0:21:63.22:0,63,1216	0/0:18,0:18:54.17:0,54,1009	0/0:16,0:16:48.16:0,48,921	0/0:14,0:13:36.12:0,36,694	0/0:23,0:23:69.24:0,69,1322	1/1:0,3:3:3.01:46,3,0	1/1:0,7:7:21.07:312,21,0	1/1:0,13:13:39.13:597,39,0	0/0:11,0:11:33.11:0,33,636	0/0:24,0:24:72.24:0,72,1355	0/0:18,0:18:54.19:0,54,1020	0/0:10,0:10:30.08:0,30,494
chr10	77366673	.	TAC	T	1962.45	PASS	AB=0.859;AC=31;AF=0.596;AN=52;BaseQRankSum=-0.407;DP=476;FS=1.892;HRun=0;HaplotypeScore=80.8037;InbreedingCoeff=0.4641;MQ=66.63;MQ0=3;MQRankSum=-0.488;QD=6.19;ReadPosRankSum=2.069;VQSLOD=2.9241;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:27,4:31:17.13:17,0,180	1/1:4,2:6:3.01:33,3,0	./.	./.	0/0:12,0:12:6.42:0,6,61	1/1:9,8:18:11.86:112,12,0	1/1:12,8:21:14.23:120,14,0	0/0:17,0:17:1.36:0,1,3	0/0:4,0:9:5.92:0,6,44	0/1:10,0:14:12.65:19,0,13	0/1:12,0:15:10.59:11,0,11	0/1:16,0:15:0.14:0,0,0	0/0:10,0:9:4.41:0,4,40	1/1:6,5:11:6.02:66,6,0	1/1:10,8:19:11.87:112,12,0	1/1:7,10:19:14.87:146,15,0	1/1:14,7:21:32.92:340,33,0	1/1:10,10:20:26.90:277,27,0	0/1:9,1:12:33:62,0,33	1/1:9,8:18:9:99,9,0	1/1:27,4:32:30.01:268,30,0	0/0:11,0:10:9:0,9,90	0/0:14,0:14:6.05:0,6,84	0/0:24,0:24:9.01:0,9,93	0/0:13,0:13:8.95:0,9,70	1/1:10,7:17:20.92:195,21,0	1/1:5,9:14:11.60:112,12,0	1/1:7,3:11:14.87:143,15,0
chr10	77366895	.	C	CA	7834.21	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=9.201;DP=509;FS=0.408;HRun=8;HaplotypeScore=65.7366;InbreedingCoeff=0.9601;MQ=54.82;MQ0=10;MQRankSum=-1.911;QD=22.84;ReadPosRankSum=-0.019;VQSLOD=5.2323;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,1:42:99:0,114,1043	1/1:2,12:13:27.07:303,27,0	0/0:15,0:8:11.76:0,12,108	0/0:18,0:5:3.56:0,4,38	1/1:0,13:14:38.92:401,39,0	1/1:3,17:19:42.12:485,42,0	1/1:2,13:14:21.06:240,21,0	1/1:5,17:22:51.15:587,51,0	0/0:16,0:16:41.98:0,42,370	1/1:2,17:19:48.14:550,48,0	1/1:6,14:20:36.11:412,36,0	0/0:13,0:12:35.97:0,36,319	0/0:10,0:10:21.01:0,21,191	1/1:1,6:7:18.05:208,18,0	1/1:3,21:23:48.14:554,48,0	1/1:2,14:16:30.09:346,30,0	1/1:8,20:30:30.20:458,30,0	1/1:2,18:20:45.61:520,46,0	1/1:7,17:23:47.95:520,48,0	1/1:4,23:27:45.07:500,45,0	1/1:1,9:10:18.05:208,18,0	0/0:15,0:14:36.02:0,36,329	0/0:23,0:23:57:0,57,517	0/0:13,0:13:33.02:0,33,302	1/1:2,4:5:12.04:138,12,0	1/1:3,20:23:63.15:702,63,0	1/1:1,22:22:39.07:427,39,0	1/1:0,8:8:24.07:277,24,0
chr10	77368467	.	CA	C	1248.63	PASS	AB=0.896;AC=38;AF=0.679;AN=56;BaseQRankSum=6.092;DP=355;FS=1.454;HRun=15;HaplotypeScore=119.6130;InbreedingCoeff=0.4658;MQ=44.13;MQ0=10;MQRankSum=-3.770;QD=4.49;ReadPosRankSum=3.934;VQSLOD=1.9730;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,3:33:9.31:9,0,375	1/1:2,2:5:8.06:40,8,0	0/0:13,0:3:2.15:0,2,11	0/0:30,0:9:17.55:0,18,115	0/0:6,0:6:11.08:0,11,53	1/1:7,4:10:17.07:76,17,0	1/1:6,7:12:9.94:49,10,0	1/1:7,4:9:8.67:56,9,0	0/1:14,0:14:11.68:18,0,12	1/1:11,4:15:12.85:64,13,0	1/1:4,1:5:5.33:26,5,0	0/1:10,0:10:7.07:10,0,7	0/0:4,0:4:1.58:0,2,9	1/1:10,3:10:1.78:17,2,0	1/1:6,8:16:30.08:142,30,0	1/1:10,5:16:24.95:125,25,0	1/1:14,7:20:42.38:242,42,0	1/1:14,4:18:25.74:166,26,0	1/1:8,6:14:13.20:88,13,0	1/1:7,3:10:5.74:37,6,0	1/1:7,6:13:23.90:119,24,0	0/0:8,0:8:5.44:0,5,24	1/1:5,0:5:0.42:1,0,0	0/0:6,0:6:4.33:0,4,24	0/0:9,0:9:4.03:0,4,28	1/1:6,3:5:0.63:1,1,0	1/1:5,8:13:24.37:124,24,0	0/1:1,1:2:2.87:3,0,16
chr10	77368471	.	A	AC	3550.98	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=4.023;DP=357;FS=23.081;HRun=0;HaplotypeScore=116.9259;InbreedingCoeff=0.8048;MQ=42.14;MQ0=14;MQRankSum=-4.739;QD=17.58;ReadPosRankSum=5.276;VQSLOD=3.4108;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:92.96:0,93,970	1/1:4,0:4:11.97:104,12,0	0/0:18,0:4:5.98:0,6,21	0/0:31,0:8:17.64:0,18,153	0/0:5,0:5:11.32:0,11,83	1/1:5,4:7:20.81:191,21,0	1/1:9,3:11:17.96:158,18,0	1/1:11,0:9:20.77:142,21,0	0/0:14,0:14:24.89:0,25,149	1/1:11,2:13:36.24:327,36,0	1/1:1,4:5:5.86:53,6,0	0/0:10,0:10:17.37:0,17,128	0/0:9,0:8:11.77:0,12,87	1/1:10,2:9:17.66:133,18,0	1/1:17,2:16:47.73:432,48,0	1/1:12,4:15:44.64:360,45,0	1/1:15,8:20:52.44:401,52,0	1/1:12,5:17:31.43:326,31,0	1/1:14,1:13:24.55:232,25,0	1/1:8,1:9:17.72:113,18,0	1/1:10,3:13:25.93:250,26,0	0/0:10,0:8:2.88:0,3,29	0/0:9,0:9:5.84:0,6,36	0/0:8,0:8:7.15:0,7,45	0/0:8,0:8:16.53:0,17,90	1/1:6,1:3:6.01:59,6,0	1/1:13,2:12:32.29:244,32,0	0/1:2,0:2:18.88:26,0,19
chr10	77368478	.	A	AC	372.66	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=7.794;DP=361;FS=1.771;HRun=0;HaplotypeScore=125.8671;InbreedingCoeff=0.3154;MQ=40.58;MQ0=14;MQRankSum=-5.779;QD=1.85;ReadPosRankSum=7.734;VQSLOD=1.9827;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:99:0,106,1058	1/1:4,0:4:0.62:12,1,0	0/1:18,0:4:7.83:8,0,16	0/0:38,0:8:2.37:0,2,91	1/1:5,1:6:8.16:55,8,0	1/1:9,0:7:9.91:29,10,0	1/1:10,0:9:5.63:15,6,0	0/1:9,0:7:9.06:9,0,12	0/0:16,0:17:27.29:0,27,152	1/1:6,0:6:7.93:30,8,0	1/1:4,0:4:3.37:9,3,0	0/0:12,0:12:25.39:0,25,159	0/0:12,0:11:11.65:0,12,78	0/1:9,0:6:2.08:2,0,15	1/1:17,0:14:13.62:50,14,0	0/1:14,0:13:13.82:14,0,18	1/1:23,0:20:17.32:72,17,0	0/1:16,0:16:13.96:36,0,14	0/1:14,0:11:11.89:23,0,12	0/0:9,0:9:1.91:0,2,30	0/1:13,0:13:3.94:20,0,4	0/0:13,0:11:12.33:0,12,82	0/0:13,0:12:17.88:0,18,105	0/0:9,0:9:9.49:0,9,52	1/1:2,4:6:14.90:141,15,0	0/1:6,0:3:0.73:1,0,2	1/1:15,0:12:1.48:19,1,0	0/1:2,0:2:0.43:0,0,19
chr10	77368481	.	AACAAC	A	3564.20	PASS	AB=0.929;AC=48;AF=0.857;AN=56;BaseQRankSum=6.895;DP=328;FS=15.774;HRun=0;HaplotypeScore=123.5092;InbreedingCoeff=0.5641;MQ=45.14;MQ0=15;MQRankSum=-6.663;QD=15.30;ReadPosRankSum=3.776;VQSLOD=2.2066;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:95.04:0,95,1633	1/1:3,0:3:8.40:53,8,0	0/0:18,0:5:5.36:0,5,25	0/0:41,0:9:17.67:0,18,180	1/1:5,0:5:8.28:68,8,0	1/1:9,0:7:18.23:92,18,0	1/1:10,0:9:11.14:79,11,0	1/1:5,0:5:8.80:53,9,0	1/1:15,1:16:27.05:381,27,0	1/1:6,0:6:13.71:72,14,0	1/1:2,0:2:5.29:22,5,0	1/1:12,0:12:27.94:395,28,0	0/1:10,0:11:23.67:125,0,24	0/1:7,0:4:0.20:6,0,0	1/1:16,0:13:31.95:256,32,0	1/1:11,0:10:28.38:203,28,0	1/1:21,0:18:39.17:269,39,0	1/1:12,0:12:32.25:190,32,0	1/1:11,0:8:19.31:113,19,0	1/1:4,0:4:5.80:33,6,0	1/1:11,0:11:25.74:183,26,0	1/1:11,2:11:22.24:244,22,0	1/1:11,2:12:24.02:270,24,0	1/1:9,0:9:12:172,12,0	1/1:6,0:6:14.49:96,14,0	1/1:4,0:2:2.04:6,2,0	1/1:13,0:10:27.12:168,27,0	1/1:2,0:2:2.88:15,3,0
chr10	77368482	.	ACAACAAC	A	5241	PASS	AB=0.800;AC=49;AF=0.875;AN=56;BaseQRankSum=6.144;DP=326;FS=9.452;HRun=0;HaplotypeScore=124.5264;InbreedingCoeff=0.5472;MQ=45.15;MQ0=15;MQRankSum=-5.347;QD=22.89;ReadPosRankSum=2.915;VQSLOD=3.9856;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:63.01:0,63,1996	1/1:3,0:3:8.94:94,9,0	0/0:17,0:5:3.76:0,4,35	0/0:41,0:9:20.76:0,21,220	1/1:4,0:4:8.75:60,9,0	1/1:9,0:7:20.83:197,21,0	1/1:10,0:9:12.02:155,12,0	1/1:5,0:5:8.96:72,9,0	1/1:13,0:16:27.05:376,27,0	1/1:6,0:6:17.93:153,18,0	1/1:2,0:2:5.99:53,6,0	1/1:9,2:12:30.02:478,30,0	0/1:9,3:11:17.61:145,0,18	1/1:7,0:4:1.31:21,1,0	1/1:16,0:13:34.92:434,35,0	1/1:11,0:10:30.02:364,30,0	1/1:21,0:18:44.84:469,45,0	1/1:12,0:12:35.97:368,36,0	1/1:11,0:8:20.68:195,21,0	1/1:4,0:4:6.01:57,6,0	1/1:10,0:10:27.87:325,28,0	1/1:9,2:10:20.94:281,21,0	1/1:10,2:12:23.75:354,24,0	1/1:9,0:9:11.69:125,12,0	1/1:5,0:6:13.18:72,13,0	1/1:4,0:2:2.99:24,3,0	1/1:13,0:10:30.04:337,30,0	1/1:1,0:1:3.01:33,3,0
chr10	77368485	.	AC	A	4321.96	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=6.676;DP=318;FS=9.637;HRun=1;HaplotypeScore=102.0132;InbreedingCoeff=0.4892;MQ=44.75;MQ0=14;MQRankSum=-5.777;QD=19.29;ReadPosRankSum=1.434;VQSLOD=4.2670;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:86.76:0,87,1081	1/1:0,3:3:9.03:107,9,0	0/0:19,0:5:8.16:0,8,37	0/0:41,1:9:2.66:0,3,108	1/1:3,1:4:0.70:41,1,0	1/1:4,5:7:21.04:233,21,0	1/1:3,7:9:12.03:139,12,0	1/1:2,4:5:9.03:124,9,0	1/1:15,0:16:25.38:148,25,0	1/1:2,4:6:18.04:203,18,0	1/1:1,1:2:6.01:68,6,0	1/1:12,0:12:26.64:189,27,0	0/1:12,0:11:33.89:35,0,34	1/1:2,3:3:2.92:17,3,0	1/1:2,13:12:36.06:385,36,0	1/1:4,7:10:29.96:320,30,0	1/1:10,9:16:45.02:500,45,0	1/1:7,4:11:32.98:394,33,0	1/1:5,6:8:20.73:241,21,0	1/1:1,3:4:6.02:82,6,0	1/1:4,6:10:26.11:298,26,0	1/1:12,0:10:16.95:102,17,0	1/1:13,0:12:21.81:131,22,0	1/1:9,0:9:10.60:52,11,0	1/1:2,4:6:13.38:124,13,0	1/1:1,3:2:3:26,3,0	1/1:2,11:10:29.97:336,30,0	1/1:0,1:1:3.01:31,3,0
chr10	77368489	.	CA	C	1032.50	PASS	AB=0.896;AC=34;AF=0.630;AN=54;BaseQRankSum=8.325;DP=330;FS=9.481;HRun=10;HaplotypeScore=119.7830;InbreedingCoeff=0.4521;MQ=44.51;MQ0=19;MQRankSum=-6.281;QD=5.97;ReadPosRankSum=7.605;VQSLOD=0.2513;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:35:84.47:0,84,800	1/1:2,0:3:2.94:18,3,0	0/0:20,0:6:1.64:0,2,28	0/0:42,0:10:12.17:0,12,112	0/1:5,1:6:10.66:20,0,11	1/1:3,4:6:14.29:84,14,0	1/1:6,4:9:8.61:51,9,0	./.	0/1:16,0:16:3.41:7,0,3	1/1:4,2:6:11.31:68,11,0	0/1:1,0:1:0:0,0,0	0/0:14,0:14:0.81:0,1,27	0/1:14,0:13:7.17:7,0,10	1/1:2,3:3:0.89:2,1,0	1/1:5,7:12:25.39:142,25,0	1/1:7,3:10:20.11:122,20,0	1/1:11,5:14:22.50:131,23,0	0/1:7,3:10:3.99:137,0,4	1/1:10,3:9:11.20:91,11,0	0/1:2,1:3:0:0,0,0	1/1:8,4:10:4.84:64,5,0	0/0:13,0:11:8.55:0,9,54	0/0:15,0:14:15.23:0,15,60	0/0:10,0:10:4.61:0,5,18	1/1:1,4:5:9:77,9,0	1/1:1,3:2:2.60:10,3,0	1/1:4,7:10:23.16:147,23,0	1/1:0,1:1:2.88:15,3,0
chr10	77368490	.	A	AC	1981.75	PASS	AB=0.933;AC=33;AF=0.589;AN=56;BaseQRankSum=7.848;DP=325;FS=1.166;HRun=1;HaplotypeScore=114.6490;InbreedingCoeff=0.5876;MQ=44.50;MQ0=20;MQRankSum=-3.966;QD=14.68;ReadPosRankSum=7.273;VQSLOD=3.2330;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:80.27:0,80,1012	1/1:3,0:3:5.05:42,5,0	0/0:20,0:6:2.55:0,3,46	0/0:42,0:9:13.06:0,13,142	0/1:6,0:6:9.25:9,0,36	1/1:5,2:5:15.04:179,15,0	1/1:6,3:8:5.62:90,6,0	0/0:9,0:5:5.32:0,5,14	0/0:16,0:16:17.06:0,17,119	1/1:4,2:6:17.14:154,17,0	1/1:1,0:1:2.04:6,2,0	0/0:14,0:14:29.69:0,30,214	0/0:14,0:13:5.87:0,6,55	1/1:3,2:3:3.01:39,3,0	1/1:13,2:12:19.72:307,20,0	1/1:6,4:9:25.29:253,25,0	1/1:9,5:11:25.11:263,25,0	1/1:5,4:9:22.18:215,22,0	1/1:11,1:8:3.99:122,4,0	1/1:3,0:3:2.22:7,2,0	0/1:9,3:10:0.68:101,0,1	0/0:13,0:11:17.87:0,18,144	0/0:16,0:15:23.87:0,24,185	0/0:10,0:10:11.96:0,12,98	0/1:5,0:5:7.31:57,0,7	1/1:3,1:2:3.01:38,3,0	1/1:11,2:10:28:251,28,0	1/1:1,0:1:3.01:38,3,0
chr10	77368500	.	CAAAACA	C	3067.32	PASS	AB=0.797;AC=41;AF=0.732;AN=56;BaseQRankSum=5.239;DP=406;FS=2.903;HRun=0;HaplotypeScore=152.7208;InbreedingCoeff=0.2003;MQ=35.94;MQ0=23;MQRankSum=-4.163;QD=9.86;ReadPosRankSum=-2.078;VQSLOD=2.5440;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:80.24:0,80,2325	1/1:2,0:2:5.38:43,5,0	0/0:14,0:5:7.62:0,8,59	0/0:41,0:5:3.30:0,3,41	0/1:16,0:14:9.32:101,0,9	1/1:17,0:14:34.51:152,35,0	1/1:12,0:11:11.10:64,11,0	1/1:12,0:4:7.74:41,8,0	1/1:5,10:15:14.40:205,14,0	0/1:10,0:10:6.73:26,0,7	1/1:14,0:14:33.89:158,34,0	0/1:6,7:13:8.30:423,0,8	0/1:7,7:13:99:146,0,107	1/1:11,0:9:15.83:67,16,0	1/1:18,0:14:32.28:212,32,0	1/1:11,0:10:22.47:157,22,0	1/1:20,0:17:21.23:179,21,0	0/1:14,0:14:10.67:47,0,11	1/1:15,0:10:12.48:39,12,0	1/1:16,0:13:27.91:140,28,0	1/1:14,0:12:5.28:104,5,0	0/1:5,7:10:20.26:275,0,20	0/1:7,10:16:28.98:406,0,29	1/1:2,9:11:2.30:68,2,0	0/0:6,0:5:4.41:0,4,52	1/1:10,0:8:7.70:27,8,0	1/1:16,0:13:8.38:139,8,0	1/1:1,0:1:2.80:13,3,0
chr10	77368505	.	CA	C	3566.58	PASS	AB=0.855;AC=43;AF=0.768;AN=56;BaseQRankSum=3.591;DP=408;FS=4.011;HRun=10;HaplotypeScore=128.6817;InbreedingCoeff=0.2588;MQ=36.93;MQ0=20;MQRankSum=-4.131;QD=10.02;ReadPosRankSum=-1.297;VQSLOD=2.1454;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:30:52.69:0,53,787	1/1:1,1:3:8.92:67,9,0	0/0:14,0:5:5.24:0,5,20	0/1:41,1:5:0.01:1,0,0	0/1:20,2:20:31.91:32,0,54	1/1:5,11:15:25.52:285,26,0	1/1:3,5:7:14.05:130,14,0	1/1:4,7:3:9:78,9,0	1/1:13,0:13:8.83:55,9,0	1/1:6,6:12:19.79:211,20,0	1/1:2,13:15:41.02:342,41,0	0/1:10,2:12:5.71:124,0,6	0/1:11,3:13:30.10:30,0,70	1/1:6,6:10:14.20:172,14,0	1/1:7,7:13:25.86:181,26,0	1/1:6,5:11:22.31:190,22,0	1/1:9,11:18:40.08:337,40,0	0/1:8,6:14:3.27:151,0,3	1/1:7,5:9:14.59:114,15,0	1/1:2,14:13:32.99:285,33,0	1/1:11,4:13:16.22:155,16,0	0/1:9,2:9:15.42:79,0,15	0/1:14,2:15:21.69:109,0,22	1/1:10,0:10:2.95:19,3,0	0/0:7,0:6:4.14:0,4,41	1/1:7,6:11:16.99:194,17,0	1/1:6,8:13:26.25:217,26,0	1/1:0,1:1:2.68:11,3,0
chr10	77368511	.	A	AC	1121.61	PASS	AB=0.983;AC=24;AF=0.429;AN=56;BaseQRankSum=-3.609;DP=448;FS=32.796;HRun=0;HaplotypeScore=147.8493;InbreedingCoeff=0.0212;MQ=38.76;MQ0=20;MQRankSum=-2.517;QD=4.14;ReadPosRankSum=-5.183;VQSLOD=0.8657;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.27:0,90,1112	1/1:4,0:4:3.31:25,3,0	0/0:16,0:5:9.77:0,10,77	0/0:46,0:6:4.53:0,5,35	1/1:14,10:22:1.09:328,1,0	0/1:19,0:17:42.78:59,0,43	0/1:11,0:10:32.79:71,0,33	1/1:14,0:6:14.36:74,14,0	0/0:13,0:13:5.44:0,5,61	0/1:12,0:12:27:65,0,27	1/1:16,0:16:22.68:66,23,0	0/0:12,0:12:25.92:0,26,178	0/0:15,0:14:20.32:0,20,182	0/1:10,0:9:22.90:33,0,23	0/1:16,0:15:16.16:16,0,80	0/1:11,0:11:15.86:16,0,62	0/1:23,0:22:54.59:55,0,89	0/1:16,0:16:28.98:73,0,29	1/1:20,0:16:10.34:105,10,0	1/1:21,0:18:26.51:99,27,0	0/1:18,0:16:20.49:74,0,20	0/0:10,0:8:17.86:0,18,146	0/0:18,0:17:15.04:0,15,192	0/0:14,0:14:14.93:0,15,119	0/1:6,2:7:32.03:32,0,72	0/1:14,0:13:4.87:96,0,5	0/1:14,0:12:9.31:9,0,41	0/0:1,0:1:2.68:0,3,11
chr10	77368518	.	A	AC	83.08	PASS	AB=0.940;AC=8;AF=0.143;AN=56;BaseQRankSum=9.325;DP=453;FS=10.930;HRun=0;HaplotypeScore=142.6753;InbreedingCoeff=0.0174;MQ=37.88;MQ0=21;MQRankSum=-4.284;QD=1.04;ReadPosRankSum=1.595;VQSLOD=1.6356;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.72:0,85,1151	0/1:4,0:4:8.04:8,0,113	0/0:21,0:8:15.75:0,16,190	0/0:44,0:5:2.96:0,3,20	0/0:24,0:22:48.56:0,49,607	0/1:19,1:19:3.50:3,0,566	0/0:12,0:12:27.38:0,27,412	0/0:17,0:8:24.05:0,24,313	0/0:13,0:13:9.91:0,10,108	0/0:11,0:11:30.57:0,31,415	0/0:17,0:17:45.15:0,45,622	0/0:12,0:12:25.84:0,26,272	0/0:16,0:15:23.93:0,24,240	0/0:9,0:9:26.82:0,27,335	0/1:17,0:16:44.73:45,0,239	0/1:9,1:10:28.15:28,0,184	0/0:22,1:23:3.31:0,3,618	0/1:17,1:18:55.76:56,0,404	0/0:18,0:14:39.13:0,39,544	0/0:21,0:18:48.15:0,48,647	0/0:17,0:15:16.29:0,16,444	0/0:9,0:7:18.06:0,18,233	0/0:19,0:18:32.89:0,33,376	0/0:15,0:15:15.05:0,15,206	0/0:11,0:9:8.34:0,8,95	0/0:13,0:13:33.11:0,33,459	0/1:8,2:10:50.51:51,0,179	1/1:0,1:1:2.92:17,3,0
chr10	77368531	.	CAAAA	C	6713.41	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=0.638;DP=467;FS=0.441;HRun=8;HaplotypeScore=131.7020;InbreedingCoeff=0.7954;MQ=45.25;MQ0=14;MQRankSum=-2.304;QD=19.18;ReadPosRankSum=1.655;VQSLOD=1.5355;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:95.54:0,96,2152	1/1:3,1:4:11.99:130,12,0	0/1:20,0:7:12.80:13,0,156	0/1:39,0:7:4.21:4,0,18	1/1:21,0:19:42.43:393,42,0	1/1:20,1:19:48.09:554,48,0	1/1:14,0:14:38.82:373,39,0	1/1:18,0:11:32.91:350,33,0	0/0:12,0:12:11.52:0,12,142	1/1:13,0:13:32.88:335,33,0	1/1:19,0:20:53.05:532,53,0	0/0:14,0:14:22.46:0,22,356	0/0:10,0:9:15.05:0,15,208	1/1:10,0:10:17.54:284,18,0	1/1:15,3:17:38.97:446,39,0	1/1:8,1:9:16.46:226,16,0	1/1:21,1:22:48.62:485,49,0	1/1:19,0:19:11.16:382,11,0	1/1:21,0:17:42.13:382,42,0	1/1:24,0:21:53.59:569,54,0	1/1:15,0:15:32.15:320,32,0	0/0:13,0:11:30:0,30,375	0/0:19,0:18:36.11:0,36,491	0/0:16,0:16:36.06:0,36,597	1/1:9,0:7:17.88:206,18,0	1/1:15,0:15:17.86:338,18,0	1/1:13,2:15:9.49:347,9,0	1/1:2,0:2:2.98:43,3,0
chr10	77368535	.	A	AC	9588.08	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=-0.939;DP=485;FS=1.413;HRun=0;HaplotypeScore=103.5378;InbreedingCoeff=0.8278;MQ=46.41;MQ0=13;MQRankSum=-2.762;QD=26.41;ReadPosRankSum=3.692;VQSLOD=5.2871;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1286	1/1:1,4:5:12.03:157,12,0	0/1:20,0:7:6.34:6,0,140	0/1:39,0:7:2.88:3,0,13	1/1:2,21:21:51.14:700,51,0	1/1:3,18:19:48.59:792,49,0	1/1:0,15:15:39.13:567,39,0	1/1:2,16:11:33.11:477,33,0	0/0:11,0:11:13.59:0,14,156	1/1:4,10:14:36.08:495,36,0	1/1:1,18:19:51.16:722,51,0	0/0:15,0:15:35.26:0,35,419	0/0:10,0:9:15.05:0,15,207	1/1:0,10:10:29.13:396,29,0	1/1:5,17:22:38.44:491,38,0	1/1:3,6:9:16.66:287,17,0	1/1:5,21:26:48.89:731,49,0	1/1:4,14:18:23.65:595,24,0	1/1:3,16:15:45.14:626,45,0	1/1:0,24:21:57.11:799,57,0	1/1:3,12:15:32.73:513,33,0	0/0:13,0:11:29.98:0,30,367	0/0:21,0:20:42.12:0,42,551	0/0:18,0:18:39.07:0,39,503	1/1:2,8:8:18.06:262,18,0	1/1:3,16:19:21.36:540,21,0	1/1:5,10:15:11.61:385,12,0	1/1:1,1:2:3.01:44,3,0
chr10	77368741	.	TACACACAC	T	1693.87	PASS	AB=0.889;AC=13;AF=0.250;AN=52;BaseQRankSum=2.650;DP=329;FS=0.864;HRun=0;HaplotypeScore=95.8036;InbreedingCoeff=0.6346;MQ=64.42;MQ0=6;MQRankSum=-4.359;QD=27.77;ReadPosRankSum=4.778;VQSLOD=3.2052;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:35.92:0,36,1316	./.	0/0:17,0:13:12.04:0,12,367	0/0:25,0:19:14.63:0,15,475	0/0:6,0:16:22.61:0,23,554	0/0:12,0:12:3.44:0,3,73	0/0:15,0:14:3.48:0,3,57	0/0:18,0:17:24.07:0,24,582	1/1:3,8:11:18.06:460,18,0	0/0:6,0:8:21.07:0,21,560	0/0:5,0:10:3.01:0,3,46	1/1:2,6:8:6.02:114,6,0	1/1:2,4:6:12.04:298,12,0	0/0:6,0:6:2.04:0,2,6	0/0:11,0:14:6.02:0,6,207	0/1:5,1:8:67.69:68,0,123	0/0:17,0:17:8.96:0,9,157	0/0:4,0:4:3.01:0,3,66	0/0:15,0:14:24.08:0,24,616	0/0:10,0:10:9.03:0,9,269	0/0:12,0:12:9.50:0,10,278	1/1:2,4:6:12.04:307,12,0	1/1:5,5:11:9.03:230,9,0	1/1:4,7:11:15.05:384,15,0	0/0:7,0:12:24.08:0,24,705	0/0:13,0:12:27.09:0,27,722	0/0:4,0:9:6.02:0,6,147	./.
chr10	77368902	.	G	GT	3469.50	PASS	AB=0.606;AC=34;AF=0.607;AN=56;BaseQRankSum=-7.799;DP=477;FS=0.000;HRun=14;HaplotypeScore=65.3514;InbreedingCoeff=0.5763;MQ=63.87;MQ0=34;MQRankSum=1.660;QD=11.26;ReadPosRankSum=-0.284;VQSLOD=3.1983;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:55.83:0,56,340	0/1:4,4:9:1.43:100,0,1	0/0:43,0:9:9.33:0,9,62	0/0:31,0:9:4.81:0,5,50	1/1:5,15:23:25.79:309,26,0	1/1:2,10:14:13.55:220,14,0	1/1:6,7:13:1.57:127,2,0	1/1:12,9:18:20.87:161,21,0	0/0:0,0:5:8.15:0,8,23	1/1:5,10:14:18.70:191,19,0	1/1:4,15:23:22.16:277,22,0	0/0:2,0:10:11.20:0,11,32	0/0:1,0:11:18.35:0,18,53	0/1:4,7:11:17.54:111,0,18	1/1:2,6:9:11.84:93,12,0	0/1:1,6:8:10.23:65,0,10	1/1:9,22:29:53.20:498,53,0	1/1:4,17:21:19.08:332,19,0	1/1:10,11:21:1.48:189,1,0	1/1:5,7:11:14.99:130,15,0	1/1:1,3:4:6:53,6,0	0/0:3,0:13:18.33:0,18,52	0/0:1,0:11:14.25:0,14,41	0/0:5,0:10:12.22:0,12,35	1/1:2,12:17:32.71:262,33,0	1/1:7,10:16:13.27:217,13,0	0/1:5,14:21:12.93:108,0,13	1/1:4,5:8:3:26,3,0
chr10	77370847	.	CA	C	7950.94	PASS	AB=0.575;AC=48;AF=0.857;AN=56;BaseQRankSum=3.431;DP=522;FS=2.860;HRun=11;HaplotypeScore=61.1065;InbreedingCoeff=0.6788;MQ=73.25;MQ0=1;MQRankSum=-0.836;QD=17.51;ReadPosRankSum=3.768;VQSLOD=5.9168;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,2:39:52.59:0,53,911	1/1:0,8:8:17.98:148,18,0	0/0:21,0:15:6.23:0,6,37	0/0:7,0:8:8.26:0,8,39	1/1:5,16:21:41.76:344,42,0	1/1:2,21:23:56.93:468,57,0	1/1:4,10:14:26.96:222,27,0	1/1:5,22:27:33.91:485,34,0	1/1:5,14:20:40.99:326,41,0	1/1:4,20:25:61.94:498,62,0	1/1:0,12:12:29.95:246,30,0	1/1:3,20:23:50.91:419,51,0	1/1:4,11:15:29.96:246,30,0	1/1:3,15:18:32.96:271,33,0	1/1:3,15:18:38.95:320,39,0	1/1:2,13:15:32.95:271,33,0	1/1:6,28:34:65.91:542,66,0	0/1:5,17:24:11.95:305,0,12	1/1:8,17:26:43.94:437,44,0	1/1:4,7:11:20.96:172,21,0	1/1:3,7:12:22.05:160,22,0	1/1:3,10:13:26.96:222,27,0	1/1:1,12:14:37.99:301,38,0	1/1:2,14:16:41.94:345,42,0	0/1:4,9:13:5.02:170,0,5	1/1:3,17:20:50.93:419,51,0	1/1:2,22:24:53.73:443,54,0	1/1:0,8:8:20.98:172,21,0
chr10	77371396	.	T	TTTTG	25041.56	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.070;DP=620;FS=1.576;HRun=0;HaplotypeScore=97.5202;InbreedingCoeff=0.9857;MQ=68.73;MQ0=2;MQRankSum=-4.843;QD=49.01;ReadPosRankSum=2.705;VQSLOD=5.7609;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,132,2172	1/1:0,5:5:15.05:374,15,0	0/0:29,0:25:37.02:0,37,505	0/0:30,0:24:44.56:0,45,676	1/1:2,12:14:32.98:702,33,0	1/1:7,16:23:48.16:1161,48,0	1/1:7,24:29:57.19:1413,57,0	1/1:14,15:29:47.71:799,48,0	1/1:3,13:18:24.08:599,24,0	1/1:7,8:15:30.10:740,30,0	1/1:1,14:16:33.11:815,33,0	1/1:4,22:26:69.24:1706,69,0	1/1:4,13:19:36.12:898,36,0	1/1:3,11:16:21.07:524,21,0	1/1:2,19:22:42.14:1047,42,0	1/1:6,12:18:39.13:903,39,0	1/1:11,31:41:78.27:1947,78,0	1/1:6,21:27:57.20:1424,57,0	1/1:7,12:19:41.70:862,42,0	1/1:4,19:24:54.18:1340,54,0	1/1:6,18:24:42.60:957,43,0	1/1:2,9:13:27.08:616,27,0	1/1:3,12:15:36.12:890,36,0	1/1:1,19:20:51.18:1274,51,0	1/1:2,13:15:36.12:866,36,0	1/1:6,23:28:66.14:1539,66,0	1/1:4,17:22:51.18:1273,51,0	1/1:3,3:6:15.05:374,15,0
chr10	77372907	.	CAATAATAAT	C	4710.46	PASS	AC=36;AF=0.783;AN=46;BaseQRankSum=-0.469;DP=209;FS=10.322;HRun=0;HaplotypeScore=62.1896;InbreedingCoeff=0.5535;MQ=56.61;MQ0=1;MQRankSum=-4.354;QD=26.76;ReadPosRankSum=-0.231;VQSLOD=2.8672;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:3.01:0,3,137	1/1:1,2:4:5.94:145,6,0	./.	./.	1/1:2,3:5:9.03:248,9,0	1/1:6,12:18:24.08:658,24,0	1/1:4,1:5:3.01:83,3,0	1/1:21,4:24:12.04:182,12,0	0/0:4,0:6:9.03:0,9,332	1/1:5,1:6:6.02:121,6,0	1/1:2,6:8:12.04:331,12,0	0/0:2,0:6:12.04:0,12,466	0/0:3,0:3:9.03:0,9,241	1/1:4,1:5:3.01:83,3,0	1/1:1,3:4:3.01:83,3,0	1/1:6,2:8:3.01:83,3,0	1/1:12,4:16:3.01:83,3,0	1/1:6,7:13:9.03:248,9,0	1/1:8,3:11:9.03:246,9,0	1/1:3,3:6:9.03:247,9,0	./.	./.	0/0:3,0:3:3.01:0,3,108	./.	1/1:7,6:13:14.97:346,15,0	1/1:4,2:6:3.01:80,3,0	1/1:3,5:8:15.05:411,15,0	1/1:2,11:15:39.13:1035,39,0
chr10	77373410	.	CCACACACACACACACA	C	564.31	PASS	AB=0.931;AC=11;AF=0.262;AN=42;BaseQRankSum=4.333;DP=463;FS=0.000;HRun=0;HaplotypeScore=179.5039;InbreedingCoeff=0.2291;MQ=63.87;MQ0=11;MQRankSum=-1.474;QD=3.87;ReadPosRankSum=1.840;VQSLOD=2.4206;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:24.05:0,24,1226	./.	./.	./.	0/0:13,0:13:6.02:0,6,108	0/0:10,0:10:9.03:0,9,148	0/0:30,0:28:9.81:0,10,150	0/0:9,0:9:0.47:0,0,1	0/1:13,4:18:34.81:173,0,35	0/0:16,0:16:5.45:0,5,63	./.	1/1:14,1:18:11.15:376,11,0	1/1:6,0:6:3.01:51,3,0	0/0:20,0:20:3.90:0,4,45	0/0:14,0:14:9.47:0,9,182	0/1:13,0:14:22.61:23,0,126	0/0:24,0:25:14.92:0,15,301	0/1:22,0:21:10.04:10,0,229	0/1:14,0:15:1.35:26,0,1	./.	0/1:47,0:46:9.46:9,0,166	./.	./.	0/0:28,11:37:0.47:0,0,1	0/0:10,0:9:9.92:0,10,281	0/0:10,0:9:13.78:0,14,104	0/0:9,0:9:9.03:0,9,173	1/1:6,0:6:2.99:23,3,0
chr10	77374444	.	TACACAC	T	702.15	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=3.771;DP=515;FS=0.000;HRun=0;HaplotypeScore=140.2873;InbreedingCoeff=0.7351;MQ=63.23;MQ0=11;MQRankSum=-6.146;QD=4.71;ReadPosRankSum=-3.619;VQSLOD=1.4124;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:40:60.79:0,61,1868	0/0:5,0:5:9.03:0,9,213	0/0:22,0:16:6.02:0,6,170	./.	1/1:13,0:26:2.61:21,3,0	0/0:24,0:22:45.15:0,45,1355	0/0:13,0:12:15.05:0,15,459	0/0:17,0:16:9.03:0,9,248	1/1:6,12:18:15.05:308,15,0	0/0:20,0:20:38.56:0,39,1044	0/0:15,0:15:17.85:0,18,439	1/1:9,7:17:3.48:62,3,0	1/1:6,7:13:12.04:215,12,0	0/0:12,0:13:3.01:0,3,44	0/0:19,0:17:33.02:0,33,932	0/0:16,0:17:27.09:0,27,750	0/0:17,0:17:19.62:0,20,494	0/0:24,0:25:39.11:0,39,1105	0/0:14,0:13:24.07:0,24,591	0/0:18,0:19:33.11:0,33,858	0/0:23,0:20:11.65:0,12,330	1/1:7,12:20:5.99:123,6,0	1/1:11,12:23:4.06:56,4,0	1/1:8,11:19:3.95:63,4,0	1/1:7,0:13:2.97:20,3,0	0/0:22,0:22:32.98:0,33,876	0/0:10,0:10:10.06:0,10,182	0/0:6,0:7:12.04:0,12,351
chr10	77374482	.	CAT	C	760.41	PASS	AB=0.981;AC=14;AF=0.250;AN=56;BaseQRankSum=2.141;DP=486;FS=3.050;HRun=0;HaplotypeScore=145.5884;InbreedingCoeff=-0.0328;MQ=46.02;MQ0=10;MQRankSum=-5.986;QD=4.13;ReadPosRankSum=0.161;VQSLOD=3.0400;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:84.76:0,85,1189	0/1:6,0:6:38.48:38,0,45	0/0:17,0:5:11.97:0,12,96	0/0:13,0:5:9.84:0,10,87	0/0:17,0:17:9.74:0,10,62	0/0:20,1:20:15.97:0,16,230	0/0:12,1:12:2.02:0,2,83	1/1:19,14:32:21.53:428,22,0	0/0:22,0:21:25.64:0,26,169	0/1:22,1:23:99:101,0,101	0/1:17,0:17:24.81:25,0,63	0/0:14,0:14:16.24:0,16,125	0/0:15,0:15:23.08:0,23,171	1/1:7,0:7:2.80:13,3,0	0/0:15,1:15:23.90:0,24,200	0/1:16,1:17:46.91:47,0,123	0/1:15,0:14:17.36:17,0,100	0/0:17,0:17:9.53:0,10,232	0/1:8,0:7:14.20:14,0,60	0/1:20,1:21:29.40:29,0,103	0/0:20,0:16:1.80:0,2,5	0/0:19,0:19:14.60:0,15,93	0/0:26,0:26:29.59:0,30,227	0/0:19,0:19:19.52:0,20,149	0/0:15,0:15:26.89:0,27,215	0/1:19,1:20:99:133,0,117	0/1:13,0:13:20.59:64,0,21	0/1:4,0:4:6.98:7,0,84
chr10	77374502	.	TATGTATGCATGC	T	2646.71	PASS	AB=0.983;AC=16;AF=0.296;AN=54;BaseQRankSum=4.423;DP=492;FS=1.132;HRun=0;HaplotypeScore=197.2311;InbreedingCoeff=-0.2782;MQ=50.20;MQ0=5;MQRankSum=-2.198;QD=10.06;ReadPosRankSum=-1.039;VQSLOD=2.7003;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.23:0,81,3427	0/1:8,0:8:2.10:2,0,68	0/0:15,0:4:8.10:0,8,65	0/0:10,0:5:14.70:0,15,139	0/0:20,0:20:30.99:0,31,914	0/1:17,1:17:97.18:97,0,120	./.	0/1:34,0:33:99:268,0,202	0/0:19,0:18:35.59:0,36,1765	0/1:24,0:24:99:554,0,164	0/1:22,0:22:60.15:62,0,60	0/0:13,0:13:23.15:0,23,1213	0/0:18,0:18:39.07:0,39,1969	1/1:7,1:8:3.01:112,3,0	0/0:13,0:13:9.02:0,9,135	0/1:18,0:18:64.48:115,0,64	0/1:21,0:20:67.88:174,0,68	0/1:14,0:14:14.98:48,0,15	0/1:7,1:8:39.73:306,0,40	0/1:26,1:27:34.86:35,0,71	0/1:22,0:20:35.53:36,0,112	0/0:21,0:21:39.04:0,39,1532	0/0:24,0:24:48.05:0,48,2228	0/0:20,0:20:29.71:0,30,1613	0/0:17,0:16:39.13:0,39,1938	0/1:21,1:22:51.35:721,0,51	0/1:14,0:14:19.73:228,0,20	0/1:3,0:3:21.84:42,0,22
chr10	77374506	.	TATGCATGC	T	4159.31	PASS	AB=1.000;AC=33;AF=0.635;AN=52;BaseQRankSum=2.941;DP=479;FS=0.000;HRun=0;HaplotypeScore=162.8912;InbreedingCoeff=0.6768;MQ=52.74;MQ0=5;MQRankSum=-1.728;QD=14.96;ReadPosRankSum=-3.102;VQSLOD=2.2153;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:63.19:0,63,2146	1/1:3,4:7:3.01:79,3,0	1/1:15,0:4:0.47:1,0,0	0/1:12,0:7:19.40:28,0,19	0/0:19,0:19:30.99:0,31,678	1/1:6,13:18:3.01:65,3,0	./.	1/1:27,0:26:39.09:582,39,0	0/0:17,0:17:32.88:0,33,1189	1/1:6,16:22:41.81:717,42,0	1/1:7,15:22:6.02:125,6,0	0/0:13,0:13:26.17:0,26,885	0/0:18,0:18:38.92:0,39,1364	1/1:2,5:7:3.01:65,3,0	./.	1/1:3,13:16:6.02:159,6,0	1/1:4,18:21:14.99:390,15,0	1/1:1,10:11:3.01:79,3,0	1/1:9,0:9:24.08:404,24,0	1/1:8,19:27:3.01:50,3,0	1/1:9,12:20:3.01:45,3,0	0/0:22,0:22:42.05:0,42,1156	0/0:22,0:22:48.04:0,48,1568	0/0:21,0:21:33.11:0,33,1173	0/0:17,0:16:39.13:0,39,1359	1/1:8,15:23:48.12:927,48,0	1/1:3,13:16:14.53:393,15,0	1/1:2,0:2:3.01:48,3,0
chr10	77374518	.	CATGCATGCA	C	1725.27	PASS	AB=0.988;AC=16;AF=0.286;AN=56;BaseQRankSum=4.955;DP=431;FS=4.872;HRun=0;HaplotypeScore=160.3846;InbreedingCoeff=-0.2294;MQ=57.89;MQ0=0;MQRankSum=-2.461;QD=7.60;ReadPosRankSum=3.262;VQSLOD=1.8844;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:74.78:0,75,2690	0/1:5,0:5:14.81:39,0,15	0/0:2,0:2:5.98:0,6,55	0/0:5,0:5:7.54:0,8,59	0/0:16,0:16:36.99:0,37,1109	0/1:15,0:15:41.45:41,0,146	0/0:11,0:11:5.98:0,6,54	0/1:23,0:23:91.09:188,0,91	0/0:18,0:18:40.17:0,40,1445	1/1:19,0:19:20.38:302,20,0	0/1:18,0:18:61.45:100,0,61	0/0:14,0:14:30.57:0,31,1152	0/0:19,0:19:47.91:0,48,1761	0/1:6,0:6:30.21:30,0,31	0/0:14,0:14:11.91:0,12,94	0/1:16,1:17:62.69:63,0,143	0/1:22,0:22:58.81:192,0,59	0/1:11,0:11:28.58:39,0,29	0/1:13,0:13:85.27:237,0,85	0/1:22,3:25:55.67:56,0,131	0/1:15,0:15:20.72:21,0,31	0/0:25,0:25:67.49:0,67,1800	0/0:20,0:20:56.96:0,57,2103	0/0:18,0:18:50.95:0,51,1557	0/0:15,0:14:42.14:0,42,1762	0/1:20,0:20:12.76:359,0,13	0/1:15,0:15:48.46:214,0,48	0/1:3,0:3:4.51:5,0,60
chr10	77375604	.	AACAC	A	10415.23	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=-5.628;DP=637;FS=30.362;HRun=0;HaplotypeScore=152.0452;InbreedingCoeff=0.5510;MQ=57.30;MQ0=30;MQRankSum=-1.947;QD=19.47;ReadPosRankSum=2.138;VQSLOD=2.7591;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:38:94.62:0,95,1571	1/1:9,0:7:17.27:251,17,0	0/0:23,0:20:44.26:0,44,897	0/0:22,0:18:41.17:0,41,850	0/1:18,0:16:29.42:29,0,315	1/1:13,0:13:17.91:239,18,0	1/1:36,0:32:46.01:691,46,0	1/1:11,22:31:67.85:962,68,0	1/1:21,0:20:16.94:330,17,0	1/1:22,0:20:54.07:876,54,0	0/0:2,14:16:0:0,0,0	1/1:32,0:28:33.03:485,33,0	1/1:19,0:17:18.26:338,18,0	1/1:11,0:10:8.50:120,9,0	1/1:25,0:24:24.46:331,24,0	1/1:25,0:23:30.53:485,31,0	0/1:23,0:22:25.42:468,0,25	1/1:16,0:15:14.49:233,14,0	1/1:28,0:27:22.65:723,23,0	1/1:17,0:17:36.05:586,36,0	1/1:28,0:27:23.22:354,23,0	1/1:20,0:20:34.38:535,34,0	1/1:20,0:17:27.51:372,28,0	0/1:37,0:33:27.69:375,0,28	0/1:27,0:27:0.98:1,0,17	1/1:19,0:19:35.49:647,35,0	1/1:13,0:11:15.05:228,15,0	1/1:22,0:22:35.09:756,35,0
chr10	77375651	.	TCACACACACACACACACACACACA	T	3492.38	PASS	AB=0.860;AC=22;AF=0.579;AN=38;BaseQRankSum=4.637;DP=495;FS=25.117;HRun=0;HaplotypeScore=212.1105;InbreedingCoeff=0.2574;MQ=34.55;MQ0=64;MQRankSum=-4.762;QD=16.87;ReadPosRankSum=1.528;VQSLOD=1.1962;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:35:48.16:0,48,3430	./.	./.	./.	./.	1/1:9,0:11:3.01:171,3,0	0/0:26,0:19:0.47:0,0,1	./.	1/1:14,7:23:0.22:644,0,0	./.	1/1:4,0:4:0.47:1,0,0	1/1:27,2:24:2.28:185,2,0	1/1:14,6:17:12.93:671,13,0	0/0:13,1:9:0.47:0,0,1	./.	1/1:15,0:19:2.80:128,3,0	0/1:15,0:16:89.17:165,0,89	0/1:15,0:15:5.89:514,0,6	1/1:14,0:15:2.17:167,2,0	1/1:10,0:12:1.96:175,2,0	0/0:23,0:15:0.47:0,0,1	0/0:12,0:14:0.62:0,1,1	0/0:15,5:18:5.69:0,6,34	0/0:29,7:30:3.39:0,3,34	./.	1/1:9,0:7:3.01:173,3,0	1/1:12,0:12:9.03:500,9,0	./.
chr10	77375885	.	G	GA	8968.40	PASS	AB=0.526;AC=37;AF=0.661;AN=56;BaseQRankSum=-11.533;DP=520;FS=11.899;HRun=9;HaplotypeScore=49.8799;InbreedingCoeff=0.9446;MQ=76.10;MQ0=1;MQRankSum=-0.920;QD=25.55;ReadPosRankSum=0.900;VQSLOD=4.8028;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:89.01:0,89,762	1/1:1,9:10:24.06:265,24,0	0/0:12,0:15:29.31:0,29,204	0/0:13,0:14:24.48:0,24,182	1/1:4,13:18:15.85:373,16,0	1/1:2,16:18:19.08:439,19,0	1/1:2,10:12:27.07:296,27,0	1/1:5,24:29:49.13:750,49,0	0/0:18,0:18:41.96:0,42,360	1/1:5,17:23:30.91:541,31,0	1/1:1,16:17:48.13:531,48,0	0/0:24,0:24:65.97:0,66,573	0/0:16,0:16:38.99:0,39,338	1/1:4,8:12:24.06:265,24,0	1/1:4,9:14:27.38:281,27,0	1/1:1,13:15:38.94:412,39,0	1/1:4,32:36:93.21:1015,93,0	1/1:3,17:20:45.08:484,45,0	1/1:2,15:18:47.95:502,48,0	1/1:5,19:25:56.94:591,57,0	1/1:3,15:18:45.12:498,45,0	0/0:20,0:20:47.99:0,48,417	0/0:21,0:21:41.96:0,42,365	0/0:6,0:6:18:0,18,156	1/1:1,16:17:22.07:472,22,0	1/1:1,19:20:54.12:580,54,0	1/1:3,15:18:42.11:464,42,0	0/1:1,9:10:1.99:208,0,2
chr10	77376181	.	G	GTACA	2880.11	PASS	AB=0.790;AC=15;AF=0.268;AN=56;BaseQRankSum=1.568;DP=635;FS=0.000;HRun=0;HaplotypeScore=135.5602;InbreedingCoeff=0.5002;MQ=64.12;MQ0=20;MQRankSum=-3.420;QD=13.59;ReadPosRankSum=2.852;VQSLOD=3.0310;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:30:51:0,51,743	0/0:8,0:10:23.84:0,24,329	0/0:36,0:15:24.14:0,24,361	0/0:40,0:22:35.39:0,35,457	0/1:7,0:13:57.90:58,0,80	0/0:21,0:22:57:0,57,904	0/0:19,0:20:53.47:0,53,740	0/0:23,0:24:66.01:0,66,704	0/1:3,15:23:6.55:294,0,7	0/0:20,0:22:49.04:0,49,779	0/1:10,0:12:8.14:8,0,446	1/1:1,17:24:35.68:875,36,0	1/1:2,9:12:3.13:327,3,0	0/0:18,0:18:48.08:0,48,766	0/0:10,0:15:31.93:0,32,515	0/0:15,0:18:46.12:0,46,677	0/0:40,0:43:80.04:0,80,1791	0/1:25,0:29:13.09:13,0,946	0/0:11,0:12:32.84:0,33,325	0/0:16,0:17:50.74:0,51,683	0/0:39,0:42:99:0,108,1595	1/1:1,18:20:7.43:253,7,0	1/1:5,13:21:6.15:221,6,0	1/1:3,21:25:32.93:888,33,0	0/1:18,0:28:99:118,0,240	0/0:26,0:26:66.82:0,67,893	0/0:18,0:18:51.03:0,51,676	0/0:7,0:7:21.02:0,21,313
chr10	77376743	.	AACACAC	A	3212.89	PASS	AB=0.800;AC=32;AF=0.640;AN=50;BaseQRankSum=5.236;DP=389;FS=23.718;HRun=0;HaplotypeScore=90.3971;InbreedingCoeff=0.6696;MQ=65.52;MQ0=18;MQRankSum=-7.685;QD=15.98;ReadPosRankSum=-0.704;VQSLOD=1.1447;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:29:27.08:0,27,692	1/1:0,2:2:2.76:22,3,0	./.	0/0:32,0:14:0.47:0,0,1	1/1:5,0:20:23.81:297,24,0	1/1:7,8:15:15.05:306,15,0	0/1:7,4:11:40.51:230,0,41	./.	0/0:9,0:10:24.06:0,24,590	0/1:11,2:13:0.19:93,0,0	1/1:7,4:10:8.94:101,9,0	0/0:12,0:13:24.07:0,24,616	0/0:7,0:7:15.04:0,15,337	1/1:8,6:14:18.02:326,18,0	1/1:5,3:9:12.04:225,12,0	1/1:6,4:11:15.05:287,15,0	1/1:15,5:20:6.02:122,6,0	1/1:8,0:8:6.02:102,6,0	./.	1/1:5,3:8:6.02:122,6,0	1/1:14,0:14:2.97:20,3,0	0/0:15,0:16:18.06:0,18,525	0/0:18,0:17:18.03:0,18,353	0/0:21,0:27:33.11:0,33,730	1/1:5,0:13:21.07:293,21,0	1/1:4,3:7:6.02:122,6,0	1/1:5,11:18:36.12:674,36,0	1/1:7,0:7:5.98:49,6,0
chr10	77377087	.	T	TTC	1668.26	PASS	AB=1.000;AC=49;AF=0.980;AN=50;BaseQRankSum=-0.127;DP=105;FS=2.915;HRun=0;HaplotypeScore=15.8621;InbreedingCoeff=-0.0898;MQ=47.40;MQ0=0;MQRankSum=-0.998;QD=16.04;ReadPosRankSum=1.034;VQSLOD=2.7935;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:4:11.70:12,0,31	1/1:1,0:1:2.98:21,3,0	./.	./.	1/1:3,0:3:8.97:87,9,0	1/1:3,0:3:8.92:81,9,0	1/1:4,0:4:2.97:20,3,0	1/1:3,0:3:5.93:40,6,0	1/1:1,0:7:3.01:37,3,0	1/1:1,4:4:9:109,9,0	1/1:2,0:2:6:53,6,0	1/1:7,0:6:15:145,15,0	1/1:3,0:3:5.99:50,6,0	1/1:3,0:2:5.99:49,6,0	1/1:6,0:5:14.83:106,15,0	1/1:3,0:3:5.97:46,6,0	1/1:3,0:3:5.93:40,6,0	./.	1/1:1,0:1:2.99:23,3,0	1/1:8,0:7:17.91:190,18,0	1/1:2,0:2:2.99:24,3,0	1/1:3,0:3:5.95:44,6,0	1/1:1,6:7:2.61:36,3,0	1/1:6,0:6:14.88:128,15,0	1/1:2,0:4:3.01:32,3,0	1/1:6,0:6:18:212,18,0	1/1:7,0:6:12.79:107,13,0	1/1:3,0:3:8.93:64,9,0
chr10	77377999	.	T	TG	1237.33	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.234;DP=346;FS=43.511;HRun=3;HaplotypeScore=54.7492;InbreedingCoeff=0.8975;MQ=63.37;MQ0=1;MQRankSum=-4.329;QD=22.10;ReadPosRankSum=-1.013;VQSLOD=0.7285;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.17:0,57,676	0/0:1,0:1:3.01:0,3,33	0/0:7,0:6:18.04:0,18,205	0/0:6,0:6:13.56:0,14,148	0/0:6,0:6:18.05:0,18,214	0/0:12,0:12:36.11:0,36,429	0/0:21,0:21:63.15:0,63,735	0/0:8,0:8:21.04:0,21,226	1/1:1,8:9:21.07:279,21,0	0/0:11,0:11:33.10:0,33,395	0/0:6,0:6:12.04:0,12,144	1/1:4,12:16:42.11:549,42,0	1/1:3,3:6:9.03:123,9,0	0/0:10,0:10:27.08:0,27,324	0/0:13,0:13:30.08:0,30,348	0/0:11,0:11:27.08:0,27,322	0/0:26,0:26:66.17:0,66,790	0/0:23,0:22:66.20:0,66,787	0/0:9,0:9:27.08:0,27,316	0/0:5,0:5:15.05:0,15,180	0/0:41,0:41:99:0,114,1360	1/1:2,4:6:6.02:82,6,0	1/1:3,3:6:9.03:126,9,0	1/1:4,9:12:20.97:253,21,0	0/0:7,0:7:18.06:0,18,216	0/0:17,0:17:42.13:0,42,502	0/0:22,0:22:63.19:0,63,755	0/0:7,0:7:21.06:0,21,252
chr10	77378009	.	CG	C	707.24	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.038;DP=323;FS=24.159;HRun=4;HaplotypeScore=49.4824;InbreedingCoeff=0.8800;MQ=64.97;MQ0=1;MQRankSum=-7.330;QD=15.72;ReadPosRankSum=-0.674;VQSLOD=1.7482;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.10:0,48,614	0/0:3,0:3:6.02:0,6,83	0/0:7,0:6:17.08:0,17,188	0/0:6,0:6:12.03:0,12,141	0/0:8,0:8:21.07:0,21,290	0/0:14,0:14:39.09:0,39,522	0/0:21,0:21:63.21:0,63,871	0/0:6,0:6:18.06:0,18,250	1/1:0,7:7:18.05:200,18,0	0/0:11,0:11:33.11:0,33,461	0/0:5,0:5:12.04:0,12,167	1/1:4,8:12:23.98:250,24,0	1/1:2,4:6:11.99:124,12,0	0/0:10,0:10:30.06:0,30,397	0/0:10,0:10:27.09:0,27,375	0/0:10,0:10:30.10:0,30,418	0/0:23,0:23:66.19:0,66,900	0/0:21,0:20:57.14:0,57,757	0/0:8,0:8:24.04:0,24,314	0/0:5,0:5:12.04:0,12,167	0/0:42,0:42:99:0,117,1591	1/1:1,6:7:6.02:70,6,0	1/1:1,1:2:3.01:36,3,0	1/1:0,11:11:18.05:198,18,0	0/0:6,0:6:12.04:0,12,167	0/0:18,0:18:36.12:0,36,501	0/0:20,0:20:60.20:0,60,837	0/0:7,0:7:21.07:0,21,294
chr10	77381513	.	C	CTAAA	2974.59	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=5.126;DP=587;FS=8.791;HRun=0;HaplotypeScore=100.1519;InbreedingCoeff=0.8119;MQ=66.63;MQ0=2;MQRankSum=-3.495;QD=20.51;ReadPosRankSum=-1.995;VQSLOD=2.2418;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:75.22:0,75,1232	0/0:10,0:10:21.07:0,21,360	0/1:25,0:21:5.98:6,0,156	0/1:34,0:24:8.02:8,0,140	0/0:27,0:27:66.23:0,66,1133	0/0:19,0:19:51.17:0,51,875	0/0:10,0:10:21.07:0,21,361	0/0:38,0:38:87.30:0,87,1492	1/1:5,12:17:36.08:848,36,0	0/0:31,0:31:75.26:0,75,1286	0/0:20,0:20:54.18:0,54,926	1/1:6,7:13:15:317,15,0	1/1:1,10:11:33.07:775,33,0	0/0:24,0:24:57.20:0,57,978	0/0:21,0:21:51.17:0,51,875	0/0:22,0:22:45.11:0,45,693	0/0:21,0:21:56.80:0,57,891	0/0:16,0:16:39.13:0,39,669	0/0:23,0:23:57.17:0,57,901	0/0:23,0:23:51.17:0,51,871	0/0:16,0:16:27.09:0,27,463	1/1:8,7:15:20.98:379,21,0	1/1:6,13:20:33.03:676,33,0	1/1:5,3:8:6.02:151,6,0	0/0:11,0:11:27.09:0,27,463	0/0:34,0:34:90.28:0,90,1493	0/0:26,0:25:48.16:0,48,824	0/0:18,0:18:45.15:0,45,772
chr10	77381884	.	GTTT	G	4583.32	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-0.261;DP=406;FS=4.238;HRun=18;HaplotypeScore=66.2512;InbreedingCoeff=0.8143;MQ=65.11;MQ0=4;MQRankSum=-2.669;QD=13.89;ReadPosRankSum=3.048;VQSLOD=2.2242;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:24:57.63:0,58,862	1/1:2,3:6:10.34:103,10,0	0/0:33,0:10:11.96:0,12,113	0/0:17,0:6:6.01:0,6,56	1/1:8,10:18:20.47:202,20,0	1/1:2,13:16:19.44:203,19,0	1/1:3,6:9:14.85:137,15,0	1/1:11,11:25:26.09:278,26,0	1/1:1,0:14:35.01:208,35,0	1/1:5,7:15:14.49:159,14,0	1/1:8,9:18:17.67:201,18,0	1/1:1,0:8:20.40:121,20,0	1/1:6,0:15:20.08:121,20,0	1/1:2,6:8:14.84:137,15,0	1/1:2,3:7:13.40:132,13,0	1/1:3,5:9:13.32:144,13,0	1/1:7,12:19:25.67:263,26,0	1/1:3,12:17:20.73:230,21,0	1/1:9,8:20:27.75:260,28,0	1/1:2,16:18:44.78:440,45,0	1/1:2,9:12:26.66:253,27,0	1/1:2,0:4:5.79:35,6,0	1/1:3,0:6:5.67:34,6,0	1/1:4,0:11:17.44:104,17,0	1/1:4,9:14:25.23:250,25,0	1/1:6,1:15:20.10:133,20,0	1/1:6,12:18:32.65:323,33,0	1/1:1,1:8:17.37:111,17,0
chr10	77382145	.	CA	C	5688.55	PASS	AB=0.667;AC=33;AF=0.589;AN=56;BaseQRankSum=7.303;DP=450;FS=4.175;HRun=10;HaplotypeScore=49.7718;InbreedingCoeff=0.8884;MQ=80.01;MQ0=1;MQRankSum=-1.660;QD=20.76;ReadPosRankSum=-0.114;VQSLOD=5.6712;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:28:66:0,66,704	1/1:1,7:8:20.99:182,21,0	0/0:20,0:18:29.76:0,30,305	0/0:12,0:12:2.67:0,3,33	0/0:15,0:16:41.95:0,42,446	1/1:1,8:9:21:182,21,0	1/1:3,23:26:65.98:573,66,0	1/1:3,20:23:56.90:482,57,0	0/0:15,0:15:42.10:0,42,457	1/1:3,8:11:23.99:208,24,0	1/1:2,18:21:53.98:469,54,0	0/0:22,0:25:53.77:0,54,546	0/0:11,0:12:32.91:0,33,333	1/1:2,11:13:29.98:258,30,0	1/1:3,9:12:26.99:234,27,0	0/1:5,5:10:75.55:106,0,76	1/1:3,35:38:92.98:807,93,0	1/1:2,11:13:29.99:260,30,0	1/1:3,15:18:44.99:390,45,0	1/1:2,14:16:35.98:312,36,0	1/1:2,4:6:11.99:104,12,0	0/0:5,0:5:12.03:0,12,133	0/0:13,0:13:27.07:0,27,299	0/0:11,0:11:33.07:0,33,356	0/0:18,1:18:31.10:0,31,571	1/1:2,23:25:68.98:599,69,0	1/1:4,14:18:38.98:338,39,0	1/1:0,7:7:21:182,21,0
chr10	77382773	.	T	TAA	4687.52	PASS	AB=0.977;AC=35;AF=0.625;AN=56;BaseQRankSum=-6.006;DP=506;FS=0.973;HRun=14;HaplotypeScore=85.2930;InbreedingCoeff=0.8388;MQ=74.48;MQ0=1;MQRankSum=0.227;QD=13.51;ReadPosRankSum=-4.833;VQSLOD=2.7682;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:42:68.94:69,0,356	1/1:0,4:7:10.74:111,11,0	0/0:25,1:23:29.32:0,29,231	0/0:9,0:7:8.03:0,8,57	0/0:17,0:17:16.30:0,16,148	1/1:2,15:17:21.07:275,21,0	1/1:4,6:12:26.32:266,26,0	1/1:16,17:39:68.03:673,68,0	0/0:15,0:15:23.52:0,24,200	1/1:2,9:13:20.99:201,21,0	1/1:2,9:12:25.12:226,25,0	0/0:23,0:24:4.90:0,5,203	0/0:16,0:16:26.58:0,27,225	1/1:3,8:11:12:138,12,0	1/1:4,13:20:4.94:244,5,0	1/1:2,15:20:30.09:382,30,0	1/1:7,19:30:38.73:440,39,0	1/1:2,12:17:21.06:261,21,0	1/1:6,7:16:28.72:265,29,0	1/1:3,8:12:19.77:201,20,0	1/1:2,11:15:17.35:183,17,0	0/0:13,0:13:20.65:0,21,175	0/0:5,0:5:8.88:0,9,75	0/0:19,0:22:43.84:0,44,336	0/0:10,0:10:26.87:0,27,221	1/1:8,14:25:50.90:489,51,0	1/1:4,21:26:8.51:88,9,0	1/1:3,3:13:17.38:176,17,0
chr10	77386180	.	A	AC	1533.17	PASS	AC=26;AF=0.722;AN=36;BaseQRankSum=7.379;DP=210;FS=2.386;HRun=3;HaplotypeScore=34.8978;InbreedingCoeff=0.7621;MQ=80.22;MQ0=28;MQRankSum=-0.877;QD=19.41;ReadPosRankSum=-4.842;VQSLOD=1.7736;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.19:0,93,1080	1/1:1,2:2:3:42,3,0	0/0:18,0:17:47.47:0,47,523	0/0:26,0:24:62.63:0,63,692	0/0:19,0:19:51.16:0,51,608	1/1:2,4:4:6.02:84,6,0	./.	./.	./.	1/1:0,9:3:9.01:108,9,0	1/1:0,8:4:9.03:126,9,0	./.	./.	1/1:0,7:4:11.95:142,12,0	1/1:1,5:4:8.96:101,9,0	1/1:0,4:4:6.02:84,6,0	1/1:0,4:4:3.01:42,3,0	1/1:1,8:7:20.97:248,21,0	./.	./.	1/1:2,9:11:27.09:373,27,0	./.	./.	./.	0/0:20,2:20:51.13:0,51,589	1/1:0,3:2:6.02:84,6,0	1/1:0,5:3:9.03:122,9,0	1/1:1,3:4:9.03:126,9,0
chr10	77388580	.	TATAGC	T	462.94	PASS	AB=0.545;AC=13;AF=0.361;AN=36;BaseQRankSum=4.001;DP=373;FS=6.634;HRun=0;HaplotypeScore=55.6771;InbreedingCoeff=0.6397;MQ=46.56;MQ0=56;MQRankSum=-1.967;QD=11.02;ReadPosRankSum=-0.971;VQSLOD=0.9437;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:81.28:0,81,2609	1/1:0,1:1:3.01:67,3,0	0/0:30,0:1:3.01:0,3,73	0/0:23,0:7:18.06:0,18,447	0/0:31,0:31:78.27:0,78,2512	./.	./.	./.	0/0:22,0:14:33.11:0,33,997	1/1:1,8:2:3.01:46,3,0	./.	0/0:23,0:12:30.10:0,30,965	0/0:27,0:17:33.11:0,33,1065	./.	./.	./.	./.	./.	./.	0/1:2,10:2:60.83:61,0,62	1/1:1,4:3:9:156,9,0	0/0:30,0:25:48.16:0,48,1547	0/0:20,0:18:39.13:0,39,1250	0/0:25,0:21:60.21:0,60,1884	0/0:29,0:28:63.22:0,63,1987	1/1:1,3:3:6.02:113,6,0	1/1:2,6:3:3.01:67,3,0	1/1:3,0:3:6.02:89,6,0
chr10	77390224	.	G	GA	676.75	PASS	AC=22;AF=0.478;AN=46;BaseQRankSum=9.406;DP=427;FS=99.060;HRun=2;HaplotypeScore=49.0616;InbreedingCoeff=0.8315;MQ=60.22;MQ0=13;MQRankSum=-5.828;QD=7.20;ReadPosRankSum=-1.360;VQSLOD=-0.5717;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.18:0,54,754	./.	0/0:30,0:27:77.55:0,78,1086	0/0:20,0:17:51:0,51,683	0/0:33,0:29:75.24:0,75,1029	1/1:2,9:3:8.84:70,9,0	1/1:2,6:4:8.63:45,9,0	1/1:2,6:5:8.90:60,9,0	0/0:38,0:34:78.14:0,78,1073	1/1:2,1:1:3.01:43,3,0	./.	0/0:28,0:26:62.95:0,63,822	0/0:36,0:33:72.24:0,72,997	1/1:0,1:1:2.88:15,3,0	1/1:4,9:7:16.80:133,17,0	1/1:4,10:9:26.38:190,26,0	0/0:2,1:2:0:0,0,0	./.	1/1:2,5:2:5.93:41,6,0	1/1:2,5:2:5.91:52,6,0	./.	0/0:35,0:32:84.24:0,84,1110	0/0:31,0:30:63.05:0,63,877	0/0:25,0:25:45.15:0,45,626	0/0:23,0:22:51.17:0,51,708	1/1:2,2:3:8.94:95,9,0	1/1:5,13:11:15.29:114,15,0	./.
chr10	77393110	.	GCACACACA	G	1805.98	PASS	AB=0.854;AC=18;AF=0.409;AN=44;BaseQRankSum=-2.778;DP=605;FS=3.020;HRun=0;HaplotypeScore=133.6229;InbreedingCoeff=0.5478;MQ=48.39;MQ0=111;MQRankSum=-5.691;QD=7.96;ReadPosRankSum=-0.888;VQSLOD=2.6200;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:28:36.12:0,36,1265	1/1:4,0:4:3.01:60,3,0	./.	0/0:42,0:7:0.47:0,0,1	0/0:9,0:11:6.02:0,6,101	0/0:11,2:12:2.84:0,3,14	./.	1/1:24,6:11:18.05:222,18,0	0/0:24,0:20:18.06:0,18,507	1/1:8,7:15:24.05:534,24,0	./.	0/0:24,0:22:21.07:0,21,589	0/0:27,0:26:36.12:0,36,917	./.	1/1:14,7:19:2.99:25,3,0	0/0:8,1:8:2.93:0,3,24	0/1:26,1:16:43.96:44,0,48	1/1:19,3:14:9.48:102,9,0	1/1:8,2:5:6.02:152,6,0	1/1:10,5:14:8.95:133,9,0	1/1:53,1:45:10.92:185,11,0	0/0:15,0:14:14.67:0,15,431	0/0:18,0:18:12.04:0,12,360	0/0:48,0:38:9.03:0,9,253	./.	0/1:17,5:19:17.91:506,0,18	0/0:9,7:15:0:0,0,0	./.
chr10	77393144	.	A	ACT	439.28	PASS	AB=0.947;AC=11;AF=0.204;AN=54;BaseQRankSum=2.554;DP=630;FS=3.306;HRun=0;HaplotypeScore=117.7214;InbreedingCoeff=0.1462;MQ=33.00;MQ0=52;MQRankSum=2.805;QD=2.51;ReadPosRankSum=-0.885;VQSLOD=2.4815;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:33:57.04:0,57,698	0/0:2,0:2:5.92:0,6,40	0/0:64,0:10:9.37:0,9,137	0/0:55,0:5:7.63:0,8,67	0/1:11,0:10:13.16:19,0,13	0/0:21,0:17:1.87:0,2,24	0/0:29,0:23:11.83:0,12,77	0/0:31,0:22:53.68:0,54,415	0/1:21,1:15:3.97:42,0,4	0/0:17,0:14:32.76:0,33,237	./.	0/1:26,0:20:14.28:119,0,14	1/1:24,0:21:15.53:174,16,0	0/0:14,0:11:3.47:0,3,25	0/0:23,0:15:2.49:0,2,19	0/0:9,0:8:2.96:0,3,19	0/0:26,0:20:6.25:0,6,127	0/0:21,0:13:20.32:0,20,131	0/0:16,0:13:11.21:0,11,160	0/1:15,0:14:2.57:3,0,27	0/0:55,0:42:20.46:0,20,139	0/1:14,1:14:5.48:84,0,5	0/1:14,0:13:3.43:82,0,3	0/1:15,21:28:2.93:47,0,3	0/0:11,0:9:2.15:0,2,22	0/0:17,0:14:39.10:0,39,273	0/1:9,0:8:0:0,0,0	0/1:2,0:2:0.76:1,0,15
chr10	77393146	.	ACT	A	311.73	PASS	AB=1.000;AC=18;AF=0.333;AN=54;BaseQRankSum=3.029;DP=624;FS=0.733;HRun=0;HaplotypeScore=114.3240;InbreedingCoeff=0.2788;MQ=33.32;MQ0=48;MQRankSum=0.563;QD=1.37;ReadPosRankSum=0.462;VQSLOD=1.9937;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:31.44:0,31,506	1/1:2,0:2:2.99:24,3,0	0/0:64,0:10:29.03:0,29,173	0/0:54,0:5:8.05:0,8,78	0/0:11,0:10:2.65:0,3,37	1/1:22,0:18:5.47:46,5,0	0/1:30,0:24:24.20:24,0,25	0/0:29,0:22:45.82:0,46,351	0/0:21,0:15:20.50:0,21,153	0/0:17,0:14:16.83:0,17,99	./.	0/0:28,0:22:38.76:0,39,296	0/0:23,0:20:39.20:0,39,295	0/1:14,0:11:18.55:19,0,20	1/1:24,0:16:5.81:39,6,0	1/1:5,4:8:3.01:40,3,0	0/1:24,0:19:40.24:40,0,53	0/1:21,0:13:25.57:26,0,31	0/0:16,0:13:5.64:0,6,118	0/0:15,0:14:12.38:0,12,71	1/1:51,0:39:4.09:102,4,0	0/0:15,0:14:14.79:0,15,117	0/0:15,0:14:14.88:0,15,113	0/0:36,0:26:8.98:0,9,74	1/1:11,0:9:5.94:42,6,0	0/1:17,0:14:59.26:59,0,70	0/0:10,0:9:0:0,0,0	0/1:2,0:2:11.61:12,0,13
chr10	77393147	.	CTCTCACAG	C	1744.06	PASS	AB=1.000;AC=25;AF=0.463;AN=54;BaseQRankSum=2.571;DP=620;FS=0.600;HRun=0;HaplotypeScore=131.3237;InbreedingCoeff=0.1030;MQ=33.52;MQ0=47;MQRankSum=-1.153;QD=5.43;ReadPosRankSum=0.582;VQSLOD=1.9782;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:25.48:0,25,1216	1/1:2,0:2:2.90:34,3,0	0/0:64,0:10:29.80:0,30,287	0/0:54,0:5:15.03:0,15,166	1/1:11,0:10:8.36:61,8,0	1/1:22,0:18:4.30:81,4,0	0/1:29,0:24:78.77:96,0,79	0/0:29,0:22:8.01:0,8,764	0/0:21,0:15:20.65:0,21,168	0/1:16,0:13:99:161,0,145	./.	0/1:29,0:23:10.65:11,0,268	0/0:23,0:20:31.08:0,31,424	0/1:14,0:11:6.17:69,0,6	1/1:24,0:16:5.40:116,5,0	1/1:9,0:8:2.22:7,2,0	0/1:24,0:19:99:189,0,153	0/1:20,0:13:69.86:101,0,70	0/1:16,0:12:99:130,0,221	0/1:16,0:15:62.78:63,0,69	1/1:50,0:38:15.98:327,16,0	0/0:14,0:13:14.84:0,15,206	0/0:15,0:14:14.90:0,15,115	0/0:36,0:26:9.03:0,9,157	1/1:10,0:9:6.02:143,6,0	0/1:17,0:14:99:275,0,129	0/1:10,0:9:0:0,0,0	0/1:2,0:2:35.40:47,0,35
chr10	77393150	.	T	TCTCA	1005.81	PASS	AB=1.000;AC=19;AF=0.352;AN=54;BaseQRankSum=1.287;DP=648;FS=5.128;HRun=0;HaplotypeScore=138.7461;InbreedingCoeff=0.1532;MQ=34.02;MQ0=46;MQRankSum=4.572;QD=3.77;ReadPosRankSum=-3.438;VQSLOD=1.2325;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:60.08:0,60,944	0/0:1,0:1:2.97:0,3,20	0/0:64,0:10:27.53:0,28,312	0/0:53,0:5:14.60:0,15,131	1/1:10,0:9:5.04:73,5,0	0/0:25,0:21:2.81:0,3,21	0/0:29,0:24:11.89:0,12,133	0/0:28,0:21:54.04:0,54,877	1/1:14,7:18:0.20:46,0,0	0/1:22,0:19:36.47:36,0,377	./.	0/1:31,0:25:5.94:263,0,6	1/1:20,0:18:26.63:278,27,0	0/0:15,0:12:0.58:0,1,1	0/1:25,0:18:13.19:19,0,13	0/0:10,0:9:2.88:0,3,15	0/0:26,0:20:24.43:0,24,247	0/1:20,0:14:0.42:0,0,194	0/0:16,0:12:6.63:0,7,336	0/1:18,0:17:14.82:15,0,73	0/0:52,0:39:20.50:0,20,158	0/1:13,0:12:15.73:93,0,16	1/1:14,0:14:5.93:103,6,0	0/1:33,0:24:2.22:68,0,2	0/1:13,0:12:14.63:35,0,15	0/0:20,0:17:40.34:0,40,510	1/1:13,0:12:3:25,3,0	0/1:10,0:10:28.26:108,0,28
chr10	77393155	.	G	GACACAC	2197.56	PASS	AB=1.000;AC=42;AF=0.840;AN=50;BaseQRankSum=-2.364;DP=669;FS=1.073;HRun=0;HaplotypeScore=152.1305;InbreedingCoeff=0.0620;MQ=34.72;MQ0=49;MQRankSum=-0.224;QD=4.40;ReadPosRankSum=-4.013;VQSLOD=1.4460;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:36:16.39:16,0,330	1/1:1,0:1:2.22:7,2,0	./.	./.	1/1:12,0:11:6:60,6,0	1/1:26,0:22:5.59:72,6,0	1/1:27,0:23:6.71:55,7,0	1/1:27,0:20:8.94:83,9,0	0/0:21,0:16:2.51:0,3,23	1/1:23,0:20:24.05:337,24,0	./.	0/1:32,0:26:13.71:116,0,14	0/1:23,0:20:12.54:56,0,13	1/1:13,0:11:6.02:89,6,0	1/1:27,0:20:12.02:148,12,0	1/1:12,0:11:1.02:21,1,0	1/1:25,0:20:0.71:50,1,0	0/1:21,0:13:10.94:39,0,11	1/1:12,3:12:9.03:233,9,0	1/1:19,2:21:14.57:136,15,0	1/1:51,0:39:4.67:37,5,0	1/1:14,0:13:5.83:60,6,0	0/0:16,0:15:2.92:0,3,17	1/1:33,0:23:9:98,9,0	1/1:13,0:12:7.36:73,7,0	1/1:21,0:18:21.41:249,21,0	1/1:11,0:10:3.01:73,3,0	1/1:11,0:11:15.05:213,15,0
chr10	77395558	.	G	GA	1644.82	PASS	AB=0.811;AC=40;AF=0.714;AN=56;BaseQRankSum=1.855;DP=359;FS=0.810;HRun=15;HaplotypeScore=76.1134;InbreedingCoeff=-0.0625;MQ=55.02;MQ0=14;MQRankSum=-2.687;QD=4.85;ReadPosRankSum=-3.676;VQSLOD=1.0782;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:32,1:33:4.02:4,0,172	1/1:5,4:8:1.41:108,1,0	0/0:10,0:7:13.28:0,13,75	0/0:9,0:6:3.88:0,4,28	0/1:10,2:12:10.26:72,0,10	0/1:8,1:9:12.03:17,0,12	1/1:8,4:4:8.98:72,9,0	0/1:3,7:9:2.65:92,0,3	1/1:13,0:10:8.43:40,8,0	1/1:12,6:15:13.77:136,14,0	0/1:7,1:8:18.90:36,0,19	1/1:6,0:4:2.84:14,3,0	1/1:5,0:5:2.84:14,3,0	1/1:9,0:10:14.37:82,14,0	1/1:5,5:11:17.79:134,18,0	0/1:6,2:8:16.80:17,0,27	0/1:25,6:32:9.86:215,0,10	0/1:7,2:10:0.34:81,0,0	1/1:9,3:7:5.97:45,6,0	0/1:6,9:15:0.91:119,0,1	1/1:4,1:5:3:25,3,0	1/1:13,0:11:17.11:86,17,0	1/1:19,0:12:21.27:102,21,0	1/1:7,0:7:5.55:27,6,0	0/1:9,3:9:1.69:83,0,2	0/1:14,1:15:26.63:49,0,27	0/1:10,6:16:3.02:86,0,3	1/1:8,2:5:1.91:31,2,0
chr10	77395637	.	A	AT	3547.42	PASS	AB=0.666;AC=32;AF=0.571;AN=56;BaseQRankSum=-5.423;DP=384;FS=0.541;HRun=11;HaplotypeScore=61.3858;InbreedingCoeff=0.5005;MQ=68.30;MQ0=2;MQRankSum=-0.596;QD=14.36;ReadPosRankSum=-0.484;VQSLOD=3.7009;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:37.41:0,37,418	1/1:3,2:5:9.02:92,9,0	0/0:14,0:10:23.47:0,23,164	0/0:23,0:12:19.47:0,19,148	1/1:4,12:17:35.71:323,36,0	1/1:5,8:14:23.88:227,24,0	1/1:4,9:13:18.92:185,19,0	0/1:4,6:10:2.20:162,0,2	0/0:1,0:13:24.44:0,24,71	1/1:12,7:19:23.30:240,23,0	0/1:6,6:12:51.68:63,0,52	0/0:0,0:5:8.15:0,8,24	0/0:1,0:10:18.84:0,19,68	1/1:0,7:8:17.87:167,18,0	1/1:3,7:11:0.64:174,1,0	1/1:3,4:8:14.86:136,15,0	1/1:10,26:38:44.97:746,45,0	1/1:2,14:18:19.36:262,19,0	0/1:4,4:8:11.25:70,0,11	0/1:7,4:11:9.98:76,0,10	0/1:3,4:7:17.22:25,0,17	0/0:1,0:8:12.21:0,12,35	0/0:4,0:14:13.74:0,14,40	0/0:2,0:17:27.37:0,27,78	1/1:5,7:11:15.03:152,15,0	1/1:5,9:14:0.79:182,1,0	1/1:3,4:8:14.86:136,15,0	0/1:6,6:9:25.42:131,0,25
chr10	77395814	.	TC	T	11840.77	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=14.479;DP=566;FS=0.362;HRun=2;HaplotypeScore=80.8679;InbreedingCoeff=0.9837;MQ=60.66;MQ0=13;MQRankSum=-1.614;QD=34.72;ReadPosRankSum=1.112;VQSLOD=5.2041;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,1641	1/1:0,7:7:18.06:233,18,0	0/0:28,0:7:18.06:0,18,269	0/0:20,0:4:12.04:0,12,170	0/0:18,0:18:39.12:0,39,564	1/1:0,20:20:57.19:740,57,0	1/1:0,20:20:51.17:662,51,0	1/1:1,30:28:84.26:1078,84,0	0/0:23,0:23:60.20:0,60,891	1/1:0,20:20:60.19:779,60,0	1/1:0,11:11:24.08:312,24,0	0/0:16,0:15:39.13:0,39,585	0/0:17,0:17:48.16:0,48,719	1/1:0,18:18:48.15:618,48,0	1/1:0,16:16:33.11:428,33,0	1/1:0,20:20:51.17:662,51,0	1/1:0,31:31:87.28:1129,87,0	1/1:3,20:23:54.16:686,54,0	1/1:1,17:17:51.17:660,51,0	1/1:1,12:12:36.12:467,36,0	1/1:0,43:43:99:1441,111,0	0/0:13,0:12:30.10:0,30,449	0/0:11,0:10:24.08:0,24,358	0/0:35,0:34:87.29:0,87,1304	0/0:4,0:4:12.03:0,12,161	1/1:0,30:30:90.29:1165,90,0	1/1:0,16:16:48.16:623,48,0	1/1:0,4:4:12.04:156,12,0
chr10	77399647	.	ATGTT	A	1056.42	PASS	AB=0.682;AC=17;AF=0.531;AN=32;BaseQRankSum=6.276;DP=403;FS=16.349;HRun=0;HaplotypeScore=49.5176;InbreedingCoeff=0.6107;MQ=23.21;MQ0=203;MQRankSum=-1.947;QD=13.37;ReadPosRankSum=-0.330;VQSLOD=1.3257;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:39:72.10:0,72,2004	1/1:5,3:2:3.01:40,3,0	./.	./.	1/1:4,10:6:11.95:159,12,0	./.	./.	./.	0/0:23,0:15:30.02:0,30,770	1/1:2,2:1:3.01:60,3,0	1/1:4,5:3:6.02:120,6,0	0/0:33,0:25:48.16:0,48,1317	0/0:26,0:19:42.14:0,42,1171	./.	./.	./.	./.	./.	1/1:3,1:1:3.01:60,3,0	0/1:8,7:8:28.69:395,0,29	./.	0/0:29,0:19:42.14:0,42,1164	0/0:20,0:13:30.10:0,30,826	0/0:24,0:6:5.93:0,6,100	1/1:1,9:6:3.01:60,3,0	1/1:4,6:3:9.03:180,9,0	./.	1/1:1,4:2:6.02:120,6,0
chr10	77400207	.	TGCGGGGGG	T	6489.59	PASS	AB=0.813;AC=36;AF=0.692;AN=52;BaseQRankSum=3.717;DP=333;FS=9.245;HRun=0;HaplotypeScore=90.5567;InbreedingCoeff=0.6710;MQ=74.50;MQ0=9;MQRankSum=-5.858;QD=29.63;ReadPosRankSum=5.928;VQSLOD=3.2832;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:4.31:0,4,60	1/1:0,3:2:3.01:85,3,0	0/0:41,0:15:14.22:0,14,377	0/1:27,0:13:2.96:3,0,302	1/1:5,0:9:17.94:239,18,0	1/1:0,16:15:33.11:875,33,0	1/1:1,10:10:8.99:190,9,0	1/1:1,7:3:8.95:130,9,0	0/0:12,0:11:0.09:0,0,401	1/1:2,12:9:23.98:377,24,0	1/1:2,10:9:9.03:254,9,0	0/0:11,0:11:5.98:0,6,92	0/0:9,0:9:17.86:0,18,195	1/1:2,9:11:18.06:511,18,0	1/1:2,8:11:27.09:745,27,0	1/1:1,9:9:15.05:426,15,0	1/1:0,18:18:17.98:382,18,0	1/1:1,4:5:6.02:172,6,0	1/1:4,3:6:12.01:277,12,0	1/1:0,4:4:6.02:170,6,0	0/1:4,6:10:0:0,0,0	./.	0/0:7,0:7:3.01:0,3,75	0/0:19,0:19:15.02:0,15,364	1/1:3,0:6:11.37:132,11,0	1/1:1,10:10:24.04:482,24,0	1/1:4,16:17:39.05:1038,39,0	./.
chr10	77400208	.	GC	G	2089.74	PASS	AB=0.986;AC=41;AF=0.788;AN=52;BaseQRankSum=3.542;DP=296;FS=0.000;HRun=1;HaplotypeScore=71.9250;InbreedingCoeff=0.2127;MQ=72.25;MQ0=9;MQRankSum=-4.945;QD=7.36;ReadPosRankSum=4.156;VQSLOD=0.7613;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:7:14.77:15,0,16	1/1:3,0:2:2.99:24,3,0	0/1:38,1:13:37.64:38,0,105	0/1:24,2:12:1.78:2,0,79	1/1:10,0:9:15.88:73,16,0	1/1:18,0:15:32.89:257,33,0	1/1:10,0:9:8.95:68,9,0	1/1:8,0:3:8.94:69,9,0	0/1:9,0:8:22.94:66,0,23	1/1:12,1:8:23.93:194,24,0	1/1:10,0:7:8.98:71,9,0	0/1:9,0:9:7.74:8,0,14	0/0:8,0:7:8.52:0,9,95	1/1:9,1:10:17.96:143,18,0	1/1:10,1:11:26.94:216,27,0	1/1:9,0:8:14.97:120,15,0	1/1:18,0:18:14.95:117,15,0	1/1:4,0:4:5.99:49,6,0	1/1:6,0:5:11.96:93,12,0	1/1:4,0:4:5.99:47,6,0	0/1:8,0:8:0:0,0,0	./.	0/0:4,0:4:3:0,3,25	0/1:12,0:13:10.50:16,0,11	1/1:8,0:6:10.35:49,10,0	1/1:11,1:10:23.96:195,24,0	1/1:16,3:16:38.84:303,39,0	./.
chr10	77400218	.	GGGGGGGA	G	1862.60	PASS	AB=0.966;AC=21;AF=0.404;AN=52;BaseQRankSum=9.909;DP=331;FS=12.515;HRun=0;HaplotypeScore=107.8686;InbreedingCoeff=-0.2406;MQ=64.12;MQ0=8;MQRankSum=-6.071;QD=7.57;ReadPosRankSum=9.401;VQSLOD=-0.6706;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:7:15.01:0,15,261	0/1:4,0:3:11:20,0,11	0/1:39,0:11:17.58:18,0,203	0/0:26,0:12:5.47:0,5,198	0/1:7,1:7:4.93:169,0,5	1/1:19,0:16:19.98:309,20,0	0/1:13,0:12:36.88:37,0,98	0/1:14,0:6:11.95:12,0,73	0/0:9,0:8:18.06:0,18,512	0/1:17,1:11:73.02:79,0,73	0/1:12,0:8:12.89:98,0,13	0/0:7,0:7:15.05:0,15,463	0/0:5,0:4:9.03:0,9,278	0/1:9,1:10:15.81:155,0,16	0/1:15,1:16:99:251,0,129	0/1:12,0:11:73.70:119,0,74	0/1:21,0:21:87.91:88,0,92	0/1:7,0:6:32.22:38,0,32	0/1:6,0:5:44.03:56,0,44	1/1:5,0:5:6.02:67,6,0	0/0:12,0:12:17.92:0,18,159	./.	0/0:2,0:2:3:0,3,26	0/0:16,0:16:26.87:0,27,577	1/1:7,0:5:6.02:96,6,0	0/1:13,1:12:59.07:109,0,59	0/1:18,3:18:19.44:302,0,19	./.
chr10	77400457	.	G	GT	4563.38	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=2.539;DP=386;FS=2.914;HRun=6;HaplotypeScore=49.3853;InbreedingCoeff=0.7793;MQ=49.44;MQ0=29;MQRankSum=-2.864;QD=19.09;ReadPosRankSum=-1.080;VQSLOD=4.1237;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.16:0,75,758	1/1:0,5:4:9.03:113,9,0	0/1:12,0:5:16.13:20,0,16	0/0:10,0:4:2.99:0,3,27	0/0:27,0:19:45.10:0,45,459	1/1:1,11:10:21.07:261,21,0	1/1:0,5:4:9.03:113,9,0	1/1:2,18:12:5.51:384,6,0	0/0:12,0:12:36.08:0,36,367	1/1:3,15:13:30.10:376,30,0	1/1:0,30:19:54.17:679,54,0	0/0:14,0:12:33.05:0,33,327	0/0:5,0:4:12.03:0,12,122	1/1:1,2:2:3.01:38,3,0	1/1:0,7:6:18.06:226,18,0	1/1:0,7:6:12.04:151,12,0	1/1:2,18:17:21.07:264,21,0	1/1:2,18:19:35.29:485,35,0	1/1:1,6:5:12.04:151,12,0	1/1:1,19:17:33.11:415,33,0	1/1:0,4:3:9.03:113,9,0	0/0:11,0:11:27.06:0,27,275	0/0:21,0:20:51.12:0,51,520	0/0:6,0:6:6.01:0,6,61	0/0:15,0:13:30.06:0,30,300	1/1:2,15:11:30.08:364,30,0	1/1:5,18:13:30.09:372,30,0	1/1:2,7:5:3.01:38,3,0
chr10	77400614	.	CGTGT	C	471.13	PASS	AB=0.675;AC=20;AF=0.417;AN=48;BaseQRankSum=2.507;DP=491;FS=3.345;HRun=0;HaplotypeScore=84.7234;InbreedingCoeff=0.4927;MQ=41.97;MQ0=28;MQRankSum=-2.539;QD=3.62;ReadPosRankSum=-2.097;VQSLOD=1.2440;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:66.12:0,66,1562	./.	0/0:37,0:17:41.14:0,41,868	0/0:48,0:21:34.40:0,34,1345	0/0:6,9:10:0.89:0,1,2	0/0:3,9:7:2.92:0,3,17	0/1:2,8:4:8.63:14,0,9	1/1:4,13:6:11.91:87,12,0	0/0:32,0:27:7.84:0,8,140	1/1:5,6:6:5.99:74,6,0	./.	0/0:26,0:25:21.53:0,22,406	0/0:20,0:19:0.03:0,0,154	./.	1/1:2,7:4:3.01:49,3,0	1/1:6,3:7:0.64:19,1,0	0/0:4,5:5:4.14:0,4,12	0/1:6,1:7:11.61:95,0,12	1/1:3,2:3:2.22:7,2,0	0/0:6,3:5:3.79:0,4,18	1/1:18,6:24:5.38:43,5,0	0/0:19,0:17:21.03:0,21,355	0/0:22,0:18:27.09:0,27,598	0/0:44,0:42:24.06:0,24,442	1/1:5,11:11:8.94:81,9,0	1/1:1,9:3:6.02:104,6,0	1/1:2,2:2:3.01:52,3,0	./.
chr10	77400632	.	CGTGTATGTGT	C	621.30	PASS	AB=0.867;AC=13;AF=0.250;AN=52;BaseQRankSum=4.266;DP=550;FS=0.000;HRun=0;HaplotypeScore=101.1878;InbreedingCoeff=-0.1929;MQ=37.26;MQ0=50;MQRankSum=-2.059;QD=2.35;ReadPosRankSum=2.004;VQSLOD=1.6667;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:36:68.72:0,69,1034	0/0:6,0:2:3.01:0,3,72	0/0:36,0:12:21.12:0,21,269	0/0:41,0:15:38.84:0,39,330	0/1:21,0:13:3.03:3,0,189	0/1:14,0:6:0:0,0,0	0/0:19,0:10:11.70:0,12,128	0/0:20,0:10:13.99:0,14,323	0/1:15,16:27:30.02:161,0,30	0/0:13,0:5:14.74:0,15,107	./.	0/1:14,14:26:61.21:61,0,252	0/1:13,8:18:99:219,0,123	0/0:9,0:2:3.01:0,3,126	0/0:14,0:8:2.31:0,2,132	0/0:12,0:9:4.46:0,4,26	0/1:18,0:9:36.65:37,0,131	0/1:10,0:8:14.12:14,0,166	0/1:9,0:4:10.32:10,0,178	1/1:9,0:2:1.55:4,2,0	0/1:31,0:20:6.78:7,0,170	0/0:10,11:18:5.95:0,6,44	0/1:17,2:14:99:125,0,113	0/1:22,28:47:99:110,0,247	0/0:19,0:12:11.92:0,12,197	0/0:20,0:9:21.68:0,22,441	0/0:9,0:3:4.99:0,5,25	./.
chr10	77400637	.	ATG	A	99.91	PASS	AB=1.000;AC=7;AF=0.146;AN=48;BaseQRankSum=1.478;DP=596;FS=0.000;HRun=0;HaplotypeScore=81.1314;InbreedingCoeff=0.3206;MQ=35.64;MQ0=57;MQRankSum=-0.245;QD=1.31;ReadPosRankSum=1.556;VQSLOD=1.4383;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:36:18.04:0,18,243	./.	./.	./.	1/1:14,8:14:9.02:97,9,0	0/0:13,0:6:2.99:0,3,23	0/0:19,0:13:8.98:0,9,74	0/0:23,0:10:6:0,6,63	0/0:29,0:27:5.36:0,5,38	0/0:14,0:6:3:0,3,26	0/0:10,0:6:2.99:0,3,23	0/0:27,0:25:0.90:0,1,70	0/1:22,0:19:15.53:18,0,16	0/0:10,0:3:2.98:0,3,21	0/0:10,0:11:5.99:0,6,49	0/0:8,0:13:5.99:0,6,50	0/0:14,0:16:6.01:0,6,71	0/0:8,0:11:6.01:0,6,63	0/0:12,0:5:4.43:0,4,19	1/1:12,0:5:2.50:9,2,0	0/0:38,0:29:8.72:0,9,60	./.	0/0:21,0:15:0:0,0,0	0/0:48,0:45:4.08:0,4,43	1/1:14,4:13:11.53:90,12,0	0/0:22,0:10:16.56:0,17,158	0/0:13,0:5:0:0,0,0	0/0:7,0:3:2.98:0,3,21
chr10	77403709	.	TCA	T	2146.28	PASS	AB=0.619;AC=44;AF=0.846;AN=52;BaseQRankSum=10.820;DP=267;FS=12.762;HRun=0;HaplotypeScore=174.9045;InbreedingCoeff=0.5243;MQ=35.80;MQ0=37;MQRankSum=-9.646;QD=13.01;ReadPosRankSum=4.874;VQSLOD=2.2983;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:99:0,117,2372	1/1:0,8:8:9.89:124,10,0	0/0:27,0:8:21.07:0,21,421	0/0:23,0:8:18.06:0,18,373	1/1:0,9:9:24.76:112,25,0	1/1:3,5:5:11.83:77,12,0	1/1:0,2:1:2.96:19,3,0	./.	1/1:0,5:2:5.75:30,6,0	1/1:0,13:11:24.27:244,24,0	1/1:1,9:9:26.13:152,26,0	1/1:1,3:4:7.75:35,8,0	1/1:0,4:3:5.75:30,6,0	0/1:1,3:4:10.11:25,0,10	1/1:0,5:4:11.76:73,12,0	1/1:0,13:12:35.38:225,35,0	1/1:0,7:5:14.79:97,15,0	./.	1/1:2,3:3:9.01:82,9,0	1/1:2,13:14:41.30:264,41,0	1/1:1,3:2:5.46:29,5,0	1/1:0,7:7:19.34:89,19,0	1/1:0,6:6:15.33:65,15,0	1/1:0,3:2:2.68:11,3,0	1/1:0,10:10:28.54:146,29,0	1/1:0,10:9:24.14:194,24,0	1/1:0,9:7:20.68:143,21,0	0/1:2,2:4:35.39:35,0,103
chr10	77403712	.	GGC	G	35.57	PASS	AB=0.560;AC=8;AF=0.154;AN=52;BaseQRankSum=4.304;DP=264;FS=17.290;HRun=0;HaplotypeScore=182.5552;InbreedingCoeff=0.3554;MQ=36.00;MQ0=39;MQRankSum=-3.401;QD=0.77;ReadPosRankSum=5.094;VQSLOD=1.4651;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:99:0,117,2239	0/0:0,8:8:4:0,4,38	0/0:24,0:6:15.05:0,15,262	0/0:22,0:7:15.05:0,15,266	0/0:9,0:9:26.47:0,26,162	0/0:3,5:5:3.41:0,3,9	0/0:0,2:1:1.25:0,1,3	./.	0/0:5,0:2:5.75:0,6,30	0/1:0,13:11:0.48:58,0,0	0/0:1,9:9:8.78:0,9,29	0/0:4,0:4:11.71:0,12,86	0/0:4,0:3:5.55:0,6,26	0/0:1,2:3:7.08:0,7,42	0/0:0,5:4:5.66:0,6,15	0/0:0,13:12:13.78:0,14,34	0/0:0,7:5:2.84:0,3,10	./.	1/1:3,3:3:8.10:35,8,0	0/0:2,13:14:17.74:0,18,47	0/1:1,3:2:0:1,0,0	0/0:7,0:7:20.57:0,21,126	0/0:6,0:6:17.73:0,18,119	0/0:3,0:2:2.94:0,3,18	0/0:10,0:10:29.05:0,29,160	1/1:0,10:9:0.81:41,1,0	0/1:0,9:7:8.15:8,0,9	0/1:2,2:4:4.11:4,0,39
chr10	77403713	.	G	GAA	3422.49	PASS	AB=0.857;AC=43;AF=0.827;AN=52;BaseQRankSum=10.605;DP=263;FS=10.187;HRun=0;HaplotypeScore=169.7635;InbreedingCoeff=0.4675;MQ=36.03;MQ0=39;MQRankSum=-8.753;QD=20.74;ReadPosRankSum=4.839;VQSLOD=3.5872;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:99:0,117,1882	1/1:8,0:8:20.09:192,20,0	0/0:22,0:5:15.05:0,15,243	0/0:22,0:7:15.05:0,15,233	1/1:0,9:9:26.94:217,27,0	1/1:8,0:5:12.01:110,12,0	1/1:2,0:1:3:27,3,0	./.	1/1:0,5:2:6:54,6,0	1/1:13,0:11:26.21:312,26,0	1/1:10,0:9:26.87:215,27,0	0/1:1,3:4:8.04:59,0,8	1/1:0,3:3:6:54,6,0	0/1:2,0:3:8.75:42,0,9	1/1:5,0:4:12:106,12,0	1/1:13,0:12:35.99:318,36,0	1/1:7,0:5:15.01:135,15,0	./.	1/1:6,0:3:9.03:103,9,0	1/1:15,0:14:41.99:365,42,0	1/1:4,0:2:5.68:38,6,0	1/1:0,7:7:20.96:171,21,0	1/1:0,6:6:17.81:134,18,0	1/1:0,3:2:2.99:23,3,0	1/1:0,10:10:30:263,30,0	1/1:10,0:9:25.13:238,25,0	1/1:9,0:7:21:197,21,0	0/1:4,0:4:20.61:52,0,21
chr10	77403718	.	A	ACTG	6505.51	PASS	AB=0.889;AC=45;AF=0.804;AN=56;BaseQRankSum=9.571;DP=367;FS=22.803;HRun=0;HaplotypeScore=243.9838;InbreedingCoeff=0.5338;MQ=33.79;MQ0=44;MQRankSum=-8.271;QD=23.66;ReadPosRankSum=2.451;VQSLOD=3.5701;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:99:0,124,2228	1/1:0,8:8:21.07:265,21,0	0/0:21,0:3:9.03:0,9,150	0/0:20,0:5:9.01:0,9,134	1/1:14,0:13:9.12:138,9,0	1/1:8,5:8:18.06:224,18,0	1/1:3,2:4:12.04:181,12,0	1/1:13,0:5:17.73:256,18,0	1/1:12,0:6:11.38:68,11,0	1/1:8,13:19:30.86:819,31,0	1/1:7,9:15:44.62:591,45,0	0/1:10,0:10:1.49:1,0,52	1/1:8,0:7:11.52:102,12,0	1/1:4,3:7:11.67:152,12,0	1/1:2,5:6:15.05:215,15,0	1/1:10,13:20:54.17:721,54,0	1/1:3,7:6:18.06:260,18,0	1/1:3,1:2:6.02:109,6,0	1/1:4,3:4:12.04:200,12,0	1/1:13,13:24:63.20:818,63,0	1/1:4,3:2:5.97:58,6,0	1/1:11,0:11:7.36:80,7,0	0/1:8,0:8:9.29:51,0,9	0/0:3,0:2:0.89:0,1,2	1/1:12,0:12:7.72:45,8,0	1/1:6,10:15:42.14:682,42,0	1/1:4,9:11:30.09:390,30,0	0/1:2,2:4:25.67:78,0,26
chr10	77403815	.	GCTC	G	11164.10	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=7.327;DP=522;FS=1.166;HRun=0;HaplotypeScore=131.9006;InbreedingCoeff=0.9662;MQ=66.00;MQ0=1;MQRankSum=-8.911;QD=41.04;ReadPosRankSum=2.309;VQSLOD=6.1346;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,138,3157	1/1:0,1:1:3.01:51,3,0	0/0:18,0:18:54.19:0,54,1177	0/0:20,0:20:57.03:0,57,1119	0/0:25,0:25:57.20:0,57,1287	1/1:0,14:13:39.13:665,39,0	1/1:1,12:13:30.10:512,30,0	1/1:0,15:15:39.13:663,39,0	0/0:22,0:19:48.16:0,48,738	1/1:1,27:25:69.22:1135,69,0	1/1:0,10:10:27.09:460,27,0	0/0:25,0:23:47.60:0,48,713	0/0:19,0:19:48.16:0,48,703	1/1:1,11:11:27.09:460,27,0	1/1:0,32:23:69.24:1176,69,0	1/1:2,17:16:39.13:663,39,0	1/1:0,22:22:66.22:1098,66,0	1/1:1,11:11:30.10:511,30,0	1/1:2,15:17:45.15:754,45,0	1/1:0,18:17:36.12:613,36,0	1/1:0,19:19:38.94:665,39,0	0/0:14,0:13:30.09:0,30,432	0/0:17,0:16:25.29:0,25,410	0/0:17,0:16:39.11:0,39,562	0/0:23,0:23:69.24:0,69,1528	1/1:1,16:15:42.14:716,42,0	1/1:2,18:19:51.17:869,51,0	1/1:0,3:3:9.03:153,9,0
chr10	77406200	.	A	AAAAC	15015.91	PASS	AB=0.615;AC=44;AF=0.786;AN=56;BaseQRankSum=-7.578;DP=594;FS=6.835;HRun=0;HaplotypeScore=75.9482;InbreedingCoeff=0.7349;MQ=59.78;MQ0=14;MQRankSum=2.385;QD=31.88;ReadPosRankSum=2.095;VQSLOD=4.3368;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:87.25:0,87,1386	1/1:0,3:4:9.03:170,9,0	0/0:21,0:9:16.64:0,17,233	0/0:25,0:11:15.04:0,15,233	0/0:24,0:24:39.11:0,39,596	1/1:6,18:24:27.05:603,27,0	0/1:5,16:22:10.84:765,0,11	1/1:30,0:25:39.11:718,39,0	1/1:7,14:22:24.08:583,24,0	1/1:11,20:31:60.19:1310,60,0	1/1:2,8:11:12.51:228,13,0	1/1:9,7:15:15.05:364,15,0	1/1:7,10:17:26.61:655,27,0	1/1:7,10:19:24.08:579,24,0	1/1:5,10:16:15.05:364,15,0	1/1:5,9:15:21.07:510,21,0	1/1:15,28:43:63.22:1510,63,0	1/1:9,14:23:24.08:583,24,0	1/1:7,15:20:45.14:1007,45,0	1/1:6,11:18:39.05:689,39,0	1/1:8,22:31:23.94:789,24,0	1/1:8,8:16:18.06:431,18,0	0/1:10,10:19:18.62:572,0,19	1/1:5,14:19:33.11:801,33,0	0/0:15,0:15:30.10:0,30,480	1/1:8,8:16:24.55:557,25,0	1/1:6,20:28:48.16:1155,48,0	1/1:2,3:5:3.01:73,3,0
chr10	77406866	.	A	AC	1671.94	PASS	AB=1.000;AC=31;AF=0.596;AN=52;BaseQRankSum=-0.841;DP=199;FS=5.865;HRun=7;HaplotypeScore=37.3224;InbreedingCoeff=0.7519;MQ=92.18;MQ0=0;MQRankSum=0.017;QD=17.42;ReadPosRankSum=-2.413;VQSLOD=2.3915;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39:0,39,364	1/1:0,2:2:3.01:36,3,0	0/1:22,0:18:27.77:28,0,164	0/0:22,0:16:10.27:0,10,83	0/0:12,0:12:32.70:0,33,290	1/1:0,3:3:6.02:72,6,0	1/1:1,9:10:17.63:217,18,0	1/1:2,4:6:9.02:97,9,0	0/0:9,0:9:21:0,21,191	1/1:1,5:6:14.98:152,15,0	1/1:0,4:4:9.03:109,9,0	0/0:8,0:8:21.02:0,21,197	0/0:15,0:16:21.89:0,22,379	./.	1/1:0,7:7:15.05:181,15,0	1/1:0,1:1:3.01:36,3,0	1/1:1,8:9:15.05:181,15,0	1/1:0,4:4:9.03:108,9,0	1/1:1,2:3:6.02:72,6,0	1/1:0,4:4:12.04:145,12,0	1/1:0,6:6:15.05:181,15,0	0/0:3,0:3:9.01:0,9,83	0/0:7,0:7:12.02:0,12,116	0/0:3,0:3:8.97:0,9,77	0/0:9,0:9:24.02:0,24,225	1/1:1,4:5:12.04:145,12,0	1/1:0,4:4:9.03:109,9,0	./.
chr10	77407126	.	AAAAG	A	813.23	PASS	AB=1.000;AC=25;AF=0.463;AN=54;BaseQRankSum=-0.861;DP=300;FS=3.648;HRun=0;HaplotypeScore=73.2153;InbreedingCoeff=0.0368;MQ=59.58;MQ0=15;MQRankSum=-2.151;QD=4.28;ReadPosRankSum=-5.570;VQSLOD=-0.7187;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:71.97:0,72,1510	0/0:2,0:2:2.75:0,3,13	0/1:16,0:5:11.17:11,0,18	0/0:36,0:15:23.24:0,23,140	1/1:8,0:8:11.62:73,12,0	0/0:15,0:15:3.51:0,4,223	0/1:12,0:12:14.11:14,0,80	0/1:26,0:24:40.94:140,0,41	1/1:1,7:8:3.01:54,3,0	0/1:8,0:7:29.68:30,0,46	0/1:6,0:5:17.44:17,0,27	1/1:7,0:7:10.72:138,11,0	1/1:4,0:4:11.17:74,11,0	0/0:4,0:4:6.78:0,7,44	0/0:3,0:2:3.99:0,4,15	0/0:5,0:5:15.04:0,15,183	0/1:18,0:16:16.82:17,0,193	0/1:24,0:23:83.74:84,0,200	0/1:21,0:21:72.28:72,0,119	1/1:2,0:2:5.99:50,6,0	0/1:5,0:5:0.10:24,0,0	./.	1/1:1,1:2:2.78:51,3,0	1/1:5,0:5:8.87:61,9,0	0/0:4,0:4:2.22:0,2,7	0/1:9,0:9:57.43:57,0,61	0/1:9,0:9:9.95:10,0,74	0/0:6,0:4:11.95:0,12,108
chr10	77407128	.	AAG	A	1712.33	PASS	AB=1.000;AC=44;AF=0.815;AN=54;BaseQRankSum=1.028;DP=293;FS=15.719;HRun=0;HaplotypeScore=59.5944;InbreedingCoeff=0.2146;MQ=59.64;MQ0=15;MQRankSum=0.063;QD=6.77;ReadPosRankSum=-4.281;VQSLOD=0.5107;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:77.09:0,77,991	1/1:2,0:2:5.91:38,6,0	0/1:17,0:5:7.50:20,0,8	0/1:36,0:15:10.49:10,0,32	1/1:1,5:6:14.95:142,15,0	0/1:15,0:15:4.30:36,0,4	1/1:8,0:8:5.09:52,5,0	1/1:25,0:23:38.29:260,38,0	1/1:8,0:8:3.01:33,3,0	1/1:10,0:9:20.76:133,21,0	1/1:6,0:5:5.12:29,5,0	1/1:6,0:6:17.74:129,18,0	1/1:4,0:4:11.93:90,12,0	1/1:3,0:3:7.14:38,7,0	1/1:4,0:3:3.28:30,3,0	0/0:5,0:5:9.32:0,9,38	0/1:18,0:16:23.37:66,0,23	1/1:24,0:23:18.50:205,19,0	1/1:22,0:22:16.97:174,17,0	1/1:2,0:2:5.99:50,6,0	1/1:5,0:5:11.61:82,12,0	./.	1/1:1,0:1:3.01:30,3,0	1/1:5,0:5:7.78:52,8,0	1/1:4,0:4:2.98:21,3,0	1/1:8,0:8:18.63:117,19,0	0/1:7,0:7:4.20:17,0,4	0/1:6,0:4:0.24:0,0,6
chr10	77407129	.	AG	A	2638.96	PASS	AB=0.942;AC=50;AF=0.926;AN=54;BaseQRankSum=4.780;DP=298;FS=2.580;HRun=1;HaplotypeScore=53.8670;InbreedingCoeff=0.2262;MQ=64.44;MQ0=15;MQRankSum=-3.529;QD=10.07;ReadPosRankSum=-2.213;VQSLOD=0.6988;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:63.98:0,64,711	1/1:2,0:2:5.94:42,6,0	0/1:18,2:7:7.36:37,0,7	0/1:37,1:16:18.91:36,0,19	1/1:6,0:6:14.91:116,15,0	1/1:15,0:15:33.21:198,33,0	1/1:7,0:7:16.83:106,17,0	1/1:26,0:24:45.67:346,46,0	1/1:8,0:8:3:27,3,0	1/1:10,0:9:26.32:190,26,0	1/1:6,0:5:8.46:54,8,0	1/1:6,0:6:17.78:122,18,0	1/1:4,0:4:11.90:84,12,0	1/1:3,0:3:8.99:77,9,0	1/1:4,0:3:7.17:47,7,0	1/1:5,0:5:9.24:30,9,0	1/1:17,1:16:26.05:158,26,0	1/1:24,0:23:53.01:341,53,0	1/1:22,0:22:37.30:246,37,0	1/1:2,0:2:5.99:50,6,0	1/1:5,0:5:11.92:91,12,0	./.	1/1:1,0:1:3:25,3,0	1/1:5,0:5:8.19:53,8,0	1/1:4,0:4:3.01:41,3,0	1/1:0,8:8:23.22:166,23,0	1/1:7,0:7:8.92:45,9,0	1/1:6,0:4:7.58:31,8,0
chr10	77407339	.	ATTT	A	4017.54	PASS	AB=0.833;AC=40;AF=0.833;AN=48;BaseQRankSum=2.311;DP=175;FS=1.093;HRun=6;HaplotypeScore=26.7761;InbreedingCoeff=0.3379;MQ=61.08;MQ0=5;MQRankSum=0.563;QD=26.96;ReadPosRankSum=1.061;VQSLOD=-0.4979;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:30.09:0,30,565	1/1:0,3:3:3:48,3,0	1/1:7,0:4:1.19:4,1,0	0/0:14,0:3:3.90:0,4,50	1/1:3,0:3:8.39:94,8,0	1/1:0,6:6:12.04:192,12,0	1/1:0,3:3:6.02:88,6,0	1/1:2,16:16:45.09:579,45,0	./.	1/1:0,5:5:15.05:231,15,0	1/1:0,1:1:3.01:46,3,0	0/0:1,0:1:3.01:0,3,49	./.	0/1:1,1:2:20.42:42,0,20	1/1:0,2:2:3.01:48,3,0	1/1:1,0:1:3.01:48,3,0	1/1:0,26:26:24.08:383,24,0	1/1:1,14:15:24.08:384,24,0	1/1:5,16:18:48.15:728,48,0	1/1:0,4:4:6.02:96,6,0	1/1:1,1:1:3.01:48,3,0	./.	1/1:1,0:1:3:28,3,0	./.	0/1:3,0:3:4.43:38,0,4	1/1:0,4:4:12.04:186,12,0	1/1:1,10:11:12.04:179,12,0	1/1:0,11:11:33.11:527,33,0
chr10	77407342	.	T	TA	951.38	PASS	AB=1.000;AC=30;AF=0.625;AN=48;BaseQRankSum=1.906;DP=181;FS=2.524;HRun=0;HaplotypeScore=35.1589;InbreedingCoeff=0.4240;MQ=66.45;MQ0=5;MQRankSum=0.986;QD=6.84;ReadPosRankSum=-1.587;VQSLOD=2.9120;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:30.09:0,30,402	1/1:3,0:3:0.47:1,0,0	0/0:10,0:7:1.01:0,1,26	0/0:15,0:4:4.26:0,4,45	1/1:0,3:3:9.03:128,9,0	0/1:6,0:6:0:2,0,0	1/1:3,0:3:2.94:18,3,0	1/1:19,0:17:39.89:394,40,0	./.	1/1:6,0:6:6.02:88,6,0	0/0:1,0:1:0.47:0,0,1	0/0:1,0:1:3:0,3,29	./.	0/0:3,0:3:2.65:0,3,26	0/1:2,0:2:0.14:0,0,0	0/0:1,0:1:1.82:0,2,5	1/1:27,0:27:0.47:4,0,0	1/1:15,0:15:2.50:13,2,0	1/1:19,0:16:16.45:205,16,0	0/1:4,0:4:0:1,0,0	0/1:2,0:1:0:0,0,0	./.	1/1:0,1:1:3.01:41,3,0	./.	1/1:0,3:3:6.02:87,6,0	1/1:4,0:4:3.01:44,3,0	1/1:11,0:11:5.88:37,6,0	1/1:11,0:11:2.60:9,3,0
chr10	77407349	.	T	TA	59.98	PASS	AB=0.775;AC=10;AF=0.192;AN=52;BaseQRankSum=0.862;DP=209;FS=2.982;HRun=0;HaplotypeScore=41.4178;InbreedingCoeff=0.3632;MQ=65.85;MQ0=6;MQRankSum=-3.073;QD=4.00;ReadPosRankSum=-2.137;VQSLOD=2.3175;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:33.08:0,33,441	0/0:3,0:3:2.97:0,3,39	0/0:12,0:8:13.81:0,14,124	0/0:19,0:5:10.05:0,10,82	0/1:2,1:3:35.99:36,0,59	0/0:6,0:6:12.04:0,12,167	0/0:4,0:4:3.48:0,3,42	0/0:18,0:16:29.02:0,29,471	1/1:3,0:3:2.94:18,3,0	0/0:6,0:6:18.06:0,18,231	0/0:2,0:2:5.98:0,6,48	1/1:0,1:1:3.01:45,3,0	./.	0/1:3,1:4:33.11:33,0,89	0/0:3,0:3:6.02:0,6,83	0/0:2,0:2:5.99:0,6,68	0/0:28,0:28:33.10:0,33,437	0/0:16,0:16:24.07:0,24,317	0/0:21,0:17:51.16:0,51,678	0/0:6,0:6:6.02:0,6,80	0/0:2,0:1:3.01:0,3,42	./.	1/1:1,1:2:3.01:30,3,0	1/1:1,1:2:3.88:27,4,0	0/0:4,0:4:8.99:0,9,86	0/0:5,0:5:12.03:0,12,150	0/0:12,0:12:16.41:0,16,170	0/0:12,0:12:32.49:0,32,382
chr10	77407360	.	AT	A	131.04	PASS	AB=0.700;AC=10;AF=0.185;AN=54;BaseQRankSum=-0.935;DP=231;FS=7.815;HRun=6;HaplotypeScore=41.4582;InbreedingCoeff=0.4546;MQ=69.62;MQ0=7;MQRankSum=-2.333;QD=6.90;ReadPosRankSum=-1.300;VQSLOD=-0.6416;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:36.12:0,36,474	0/0:2,0:2:3.01:0,3,39	0/0:18,0:13:29.23:0,29,304	0/0:20,0:6:8.32:0,8,108	0/0:3,0:3:6.49:0,6,78	0/0:5,0:5:12.01:0,12,140	0/0:4,0:4:6.02:0,6,78	0/0:22,0:21:56.74:0,57,570	1/1:0,4:4:9.02:97,9,0	0/0:6,0:6:17.92:0,18,194	0/0:4,0:4:6.02:0,6,79	1/1:0,1:1:3.01:32,3,0	./.	0/1:3,1:4:19.80:20,0,106	0/0:4,0:4:8.89:0,9,111	0/0:2,0:2:6.02:0,6,75	0/0:23,0:23:45.10:0,45,558	0/0:20,0:19:33.11:0,33,433	0/0:21,0:17:38.92:0,39,439	0/0:7,0:7:18.06:0,18,234	0/0:3,0:2:5.97:0,6,46	1/1:2,1:2:6.01:63,6,0	0/1:1,2:3:11.66:26,0,12	1/1:1,3:4:2.30:31,2,0	0/0:4,0:4:9.03:0,9,117	0/0:7,0:7:21.03:0,21,256	0/0:15,0:15:27.08:0,27,343	0/0:9,0:9:26.94:0,27,315
chr10	77407856	.	AT	A	609.06	PASS	AB=0.647;AC=25;AF=0.781;AN=32;BaseQRankSum=-1.141;DP=289;FS=13.522;HRun=13;HaplotypeScore=20.1815;InbreedingCoeff=0.3933;MQ=20.43;MQ0=171;MQRankSum=-1.308;QD=4.09;ReadPosRankSum=0.362;VQSLOD=-0.3260;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,2:3:4.99:28,5,0	./.	./.	0/0:25,1:16:0:0,0,0	1/1:3,5:4:2.98:21,3,0	./.	./.	./.	1/1:6,11:8:14.88:109,15,0	0/0:9,2:10:0:0,0,0	./.	1/1:4,3:2:2.80:13,3,0	./.	1/1:2,6:4:5.97:44,6,0	1/1:3,6:3:2.98:22,3,0	./.	./.	1/1:2,5:2:5.95:42,6,0	1/1:3,10:12:14.86:109,15,0	./.	1/1:5,8:7:2.98:22,3,0	1/1:5,11:11:11.87:83,12,0	0/1:5,6:1:0:0,0,0	0/0:10,0:8:6.90:0,7,60	1/1:4,8:8:17.12:117,17,0	1/1:5,14:8:11.93:88,12,0	./.
chr10	77408386	.	A	AT	1119.50	PASS	AB=0.997;AC=30;AF=0.536;AN=56;BaseQRankSum=6.843;DP=420;FS=13.095;HRun=9;HaplotypeScore=83.3086;InbreedingCoeff=0.0176;MQ=67.66;MQ0=2;MQRankSum=-4.055;QD=3.57;ReadPosRankSum=-0.889;VQSLOD=-0.3954;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,2:24:2.61:0,3,223	0/1:4,0:4:1.58:2,0,17	0/0:22,0:15:3.88:0,4,62	0/0:15,0:12:10.73:0,11,74	1/1:5,12:19:35.61:303,36,0	0/1:17,0:17:32.94:33,0,87	0/1:26,1:25:74.82:75,0,81	0/0:20,0:19:20.80:0,21,156	1/1:8,0:8:10.03:56,10,0	0/1:17,0:17:3.89:4,0,115	0/1:8,0:8:8.86:9,0,18	1/1:9,0:8:6.72:34,7,0	1/1:15,0:14:8.69:54,9,0	0/1:26,0:24:37.86:38,0,44	0/1:10,0:10:13:14,0,13	0/1:14,0:14:31.68:32,0,66	0/1:32,0:32:73.34:73,0,81	0/1:12,0:11:12.48:12,0,16	0/0:14,0:12:6.78:0,7,103	0/1:11,0:11:5.27:5,0,15	0/0:11,0:11:2.87:0,3,22	1/1:8,0:8:20.31:151,20,0	1/1:5,0:5:8.90:68,9,0	1/1:22,0:22:17.90:135,18,0	1/1:3,7:12:20.70:173,21,0	0/1:15,0:15:0.15:0,0,133	0/1:16,0:16:5.02:5,0,31	0/1:7,0:7:11.63:12,0,38
chr10	77408395	.	T	TTGG	1182.03	PASS	AB=0.898;AC=23;AF=0.411;AN=56;BaseQRankSum=3.167;DP=420;FS=12.467;HRun=0;HaplotypeScore=108.8872;InbreedingCoeff=0.1460;MQ=65.50;MQ0=2;MQRankSum=-0.214;QD=5.35;ReadPosRankSum=-1.568;VQSLOD=1.0915;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:37.46:0,37,463	0/0:4,0:6:4.79:0,5,31	0/0:19,0:12:12.81:0,13,170	0/1:14,0:11:18.12:18,0,87	0/1:17,0:17:34.13:36,0,34	0/0:14,0:18:2.40:0,2,174	0/0:15,0:21:16.06:0,16,195	0/1:14,0:16:15.81:16,0,132	1/1:1,4:8:11.93:184,12,0	0/0:12,0:17:28.17:0,28,195	0/0:6,0:7:11.24:0,11,75	1/1:0,6:11:11.77:134,12,0	1/1:2,8:15:9.03:148,9,0	0/0:17,0:22:1.76:0,2,100	0/1:12,0:13:28.28:29,0,28	0/0:8,0:15:26.43:0,26,194	0/0:20,0:32:38.68:0,39,337	0/1:9,0:11:2.52:3,0,83	0/1:11,0:12:3.53:4,0,129	0/1:10,0:13:11.47:11,0,28	0/1:14,0:14:11.24:13,0,11	1/1:7,0:10:23.95:222,24,0	1/1:3,0:4:6.47:53,6,0	1/1:5,14:29:24.02:421,24,0	0/1:11,0:11:9.39:27,0,9	0/0:12,0:16:21.13:0,21,179	0/1:11,0:13:18.75:19,0,37	0/1:3,0:4:24.99:25,0,61
chr10	77408430	.	TG	T	7654.56	PASS	AB=0.526;AC=33;AF=0.589;AN=56;BaseQRankSum=-3.721;DP=375;FS=25.681;HRun=1;HaplotypeScore=56.9178;InbreedingCoeff=0.8916;MQ=57.36;MQ0=11;MQRankSum=-1.231;QD=36.80;ReadPosRankSum=0.654;VQSLOD=2.8539;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.22:0,66,1032	1/1:0,8:8:21.07:294,21,0	0/0:26,0:9:27.03:0,27,369	0/0:31,0:18:45.13:0,45,652	0/0:20,0:20:60.20:0,60,956	1/1:0,18:18:42.14:587,42,0	1/1:0,22:22:54.18:750,54,0	1/1:0,15:15:45.14:608,45,0	0/0:12,0:12:30.08:0,30,392	1/1:0,8:8:24.08:334,24,0	1/1:1,10:11:30.09:403,30,0	0/0:11,0:11:21.07:0,21,293	0/0:5,0:5:6.02:0,6,75	1/1:0,14:13:33.11:461,33,0	1/1:0,12:12:33.11:461,33,0	1/1:1,12:13:36.12:503,36,0	1/1:1,20:21:57.19:786,57,0	0/1:1,9:10:17.25:269,0,17	1/1:0,12:12:36.12:502,36,0	1/1:1,8:9:24.03:312,24,0	1/1:0,14:14:42.14:587,42,0	0/0:6,0:6:12.56:0,13,195	0/0:4,0:4:12.04:0,12,166	0/0:23,0:23:42.67:0,43,621	0/0:6,0:6:18.06:0,18,288	1/1:0,10:10:30.10:419,30,0	1/1:0,6:6:18.06:251,18,0	1/1:0,5:5:9.03:126,9,0
chr10	77408649	.	C	CT	1371.84	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=8.081;DP=435;FS=17.319;HRun=8;HaplotypeScore=54.0636;InbreedingCoeff=0.9020;MQ=66.72;MQ0=3;MQRankSum=-0.942;QD=17.15;ReadPosRankSum=-0.508;VQSLOD=2.0323;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:69:0,69,625	0/0:2,0:2:3:0,3,27	0/0:24,0:13:20.82:0,21,182	0/1:21,0:14:0.18:0,0,237	0/0:28,0:27:66.02:0,66,602	0/0:13,0:13:36:0,36,324	0/0:16,0:16:39.01:0,39,357	0/0:25,0:25:57.01:0,57,517	1/1:3,6:9:27.08:307,27,0	0/0:12,0:12:21:0,21,192	0/0:12,0:11:27:0,27,242	1/1:4,8:12:33.10:380,33,0	1/1:1,7:8:12.03:138,12,0	0/0:10,0:10:24.01:0,24,220	0/0:19,0:19:57.01:0,57,515	0/0:15,0:15:39.02:0,39,357	0/0:18,0:18:51.03:0,51,467	0/0:19,0:18:41.98:0,42,377	0/0:24,0:24:54.02:0,54,490	0/0:15,0:15:39.02:0,39,356	0/0:7,0:7:17.97:0,18,154	1/1:3,6:8:21.06:236,21,0	1/1:4,7:9:21.05:233,21,0	1/1:4,6:10:24.03:262,24,0	0/0:13,0:13:23.99:0,24,219	0/0:20,0:19:51.01:0,51,463	0/0:21,0:21:54.02:0,54,494	0/0:14,0:14:30.02:0,30,274
chr10	77408667	.	T	TC	1615.81	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.880;DP=447;FS=8.976;HRun=1;HaplotypeScore=62.6742;InbreedingCoeff=0.9660;MQ=64.06;MQ0=4;MQRankSum=-0.005;QD=22.44;ReadPosRankSum=1.548;VQSLOD=2.9575;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.09:0,78,946	0/0:2,0:2:6.02:0,6,77	0/0:22,0:11:12.60:0,13,181	0/0:27,0:15:28.83:0,29,269	0/0:26,0:25:54.17:0,54,687	0/0:16,0:16:42.10:0,42,491	0/0:22,0:22:60.06:0,60,693	0/0:22,0:22:60.14:0,60,704	1/1:2,12:14:21.07:288,21,0	0/0:12,0:12:33.08:0,33,392	0/0:14,0:12:27:0,27,324	1/1:1,13:12:24.08:332,24,0	1/1:6,3:8:18.04:214,18,0	0/0:8,0:8:21.07:0,21,268	0/0:22,0:22:60.17:0,60,744	0/0:14,0:14:42.03:0,42,494	0/0:24,0:24:66.17:0,66,818	0/0:19,0:19:54.10:0,54,647	0/0:14,0:13:30.09:0,30,370	0/0:15,0:15:42.06:0,42,477	0/0:7,0:7:21.05:0,21,246	1/1:7,6:11:29.92:327,30,0	1/1:5,6:8:24.03:309,24,0	1/1:5,6:11:24.03:332,24,0	0/0:12,0:12:30.04:0,30,351	0/0:19,0:19:57.14:0,57,665	0/0:23,0:23:63.10:0,63,737	0/0:7,0:7:18:0,18,213
chr10	77408930	.	T	TGC	1391.79	PASS	AB=1.000;AC=25;AF=0.521;AN=48;BaseQRankSum=-4.924;DP=471;FS=1.294;HRun=0;HaplotypeScore=70.3001;InbreedingCoeff=0.0583;MQ=40.70;MQ0=32;MQRankSum=2.909;QD=4.72;ReadPosRankSum=-1.172;VQSLOD=2.3403;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:59:86.82:0,87,908	./.	0/0:23,0:4:6.01:0,6,60	0/0:36,0:8:14.12:0,14,162	0/0:17,0:12:14.98:0,15,124	1/1:16,0:14:8.94:66,9,0	1/1:18,0:16:35.65:263,36,0	0/1:23,0:19:99:135,0,111	./.	0/1:18,0:12:19.33:144,0,19	0/1:8,0:7:0:0,0,0	./.	0/0:15,0:7:5.75:0,6,31	1/1:12,0:11:14.84:128,15,0	1/1:17,0:14:17.54:106,18,0	1/1:17,0:16:0.20:87,0,0	0/1:13,0:11:24.39:24,0,43	0/1:10,0:10:55.03:70,0,55	0/1:16,0:10:52.52:62,0,53	0/1:19,0:17:4.27:92,0,4	1/1:25,20:40:11.85:111,12,0	./.	0/1:6,0:1:0:0,0,0	0/1:6,0:4:0.02:0,0,0	0/1:8,0:8:3.39:3,0,35	0/1:24,0:19:48.65:182,0,49	0/1:12,0:9:5.08:49,0,5	0/1:7,0:4:13.02:13,0,14
chr10	77409721	.	ATGTC	A	2708.73	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=11.000;DP=779;FS=1.128;HRun=0;HaplotypeScore=107.8413;InbreedingCoeff=0.9595;MQ=47.35;MQ0=100;MQRankSum=-3.681;QD=21.16;ReadPosRankSum=2.603;VQSLOD=3.0667;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,111,2895	0/0:12,0:12:30.10:0,30,778	./.	0/0:32,0:2:6.02:0,6,157	0/0:22,0:17:33.08:0,33,755	0/0:24,0:24:51.18:0,51,1335	0/0:18,0:18:45.14:0,45,1084	0/0:40,0:13:33.11:0,33,864	1/1:0,30:27:32.74:599,33,0	0/0:37,0:35:90.29:0,90,2258	0/0:28,0:28:54.18:0,54,1399	1/1:2,23:24:42.62:764,43,0	1/1:3,22:19:30.10:545,30,0	0/0:38,0:38:87.30:0,87,2248	0/0:42,0:41:93.32:0,93,2384	0/0:18,0:18:48.15:0,48,1202	0/0:35,0:35:90.29:0,90,2233	0/0:24,0:24:66.23:0,66,1723	0/0:24,0:14:42.13:0,42,1047	0/0:28,0:28:75.24:0,75,1875	0/0:62,0:62:99:0,159,4038	1/1:1,18:19:30.10:545,30,0	1/1:4,6:9:9.03:164,9,0	1/1:4,15:14:15.05:273,15,0	0/0:23,0:17:24.07:0,24,573	0/0:32,0:32:87.29:0,87,2225	0/0:29,0:28:57.20:0,57,1449	0/0:6,0:6:15.05:0,15,392
chr10	77412182	.	TA	T	11663.12	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=6.842;DP=601;FS=0.585;HRun=9;HaplotypeScore=105.8983;InbreedingCoeff=0.9062;MQ=66.25;MQ0=5;MQRankSum=-2.744;QD=21.76;ReadPosRankSum=2.700;VQSLOD=4.8102;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1148	1/1:0,10:10:24.01:219,24,0	0/0:15,0:15:21.56:0,22,209	0/0:12,0:11:3.92:0,4,123	1/1:3,14:16:7.39:314,7,0	1/1:0,15:15:42.02:384,42,0	1/1:2,22:24:57.03:522,57,0	1/1:5,21:26:63.03:576,63,0	1/1:1,26:27:72:651,72,0	1/1:4,14:17:39.02:357,39,0	1/1:1,16:17:48.03:439,48,0	1/1:5,23:28:62.98:568,63,0	1/1:3,11:14:32.98:295,33,0	1/1:2,20:22:57.02:522,57,0	1/1:3,23:27:63.02:577,63,0	1/1:2,21:23:57.03:522,57,0	1/1:0,32:32:84.05:769,84,0	1/1:5,29:34:84.02:763,84,0	1/1:1,18:19:50.99:460,51,0	1/1:5,23:27:63.01:577,63,0	1/1:3,12:15:32.99:297,33,0	1/1:3,15:17:16.29:307,16,0	1/1:4,19:22:50.99:459,51,0	1/1:4,28:32:75.04:686,75,0	1/1:1,11:9:18.01:165,18,0	1/1:2,22:24:63.03:577,63,0	1/1:5,26:31:72.02:659,72,0	./.
chr10	77413159	.	TTTTC	T	798.47	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=5.136;DP=484;FS=33.908;HRun=0;HaplotypeScore=93.2313;InbreedingCoeff=0.8188;MQ=54.68;MQ0=18;MQRankSum=-4.842;QD=10.24;ReadPosRankSum=-2.492;VQSLOD=0.7924;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:96.16:0,96,1685	0/0:11,0:11:30.06:0,30,549	0/0:20,0:9:1.15:0,1,125	0/1:19,0:7:9.92:10,0,114	0/0:30,0:26:56.85:0,57,653	0/0:17,0:16:39:0,39,704	0/0:12,0:11:33.11:0,33,651	0/0:29,0:28:75.18:0,75,1186	1/1:0,10:10:9.03:158,9,0	0/0:19,0:16:45.07:0,45,687	0/0:16,0:13:33.02:0,33,642	1/1:6,0:6:14.56:100,15,0	1/1:5,0:5:11.95:95,12,0	0/0:13,0:13:31.84:0,32,486	0/0:14,0:14:36.01:0,36,655	0/0:11,0:10:30.05:0,30,500	0/0:32,0:30:81.14:0,81,1612	0/0:29,0:28:64.32:0,64,1187	0/0:21,0:13:23.85:0,24,529	0/0:12,0:11:30.07:0,30,566	0/0:8,0:8:14.37:0,14,215	1/1:10,2:8:20.89:223,21,0	1/1:6,7:7:5.97:60,6,0	1/1:10,3:13:29.93:330,30,0	0/0:28,0:28:56.94:0,57,655	0/0:16,0:15:45.08:0,45,869	0/0:23,0:21:57.03:0,57,962	0/0:8,0:8:24.03:0,24,359
chr10	77414451	.	C	CA	7286.27	PASS	AB=0.616;AC=44;AF=0.786;AN=56;BaseQRankSum=-7.107;DP=516;FS=11.991;HRun=9;HaplotypeScore=60.8135;InbreedingCoeff=0.7560;MQ=62.24;MQ0=5;MQRankSum=-0.617;QD=19.64;ReadPosRankSum=0.616;VQSLOD=4.5900;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,101,1011	1/1:2,6:8:15.04:166,15,0	0/0:25,0:16:21.50:0,22,160	0/0:32,0:16:23.90:0,24,191	0/0:23,0:23:35.51:0,36,470	0/1:3,7:10:5:178,0,5	1/1:3,18:21:28.10:538,28,0	1/1:11,22:31:40.13:671,40,0	1/1:4,1:12:5.68:29,6,0	1/1:5,14:19:42.10:456,42,0	1/1:1,14:18:50.64:507,51,0	1/1:4,0:15:7.16:50,7,0	1/1:5,1:14:23.51:122,24,0	0/1:4,5:9:7.98:146,0,8	1/1:0,8:8:18.05:199,18,0	1/1:0,13:13:33.09:365,33,0	1/1:2,23:25:28.13:595,28,0	1/1:2,16:18:16.15:405,16,0	1/1:4,17:20:47.97:489,48,0	1/1:4,15:20:21.92:452,22,0	1/1:2,14:16:33.09:365,33,0	1/1:2,0:10:19.89:99,20,0	1/1:4,0:13:10.70:56,11,0	1/1:6,0:12:11.23:69,11,0	0/0:19,0:19:50.96:0,51,438	1/1:4,19:22:34.07:584,34,0	1/1:2,13:15:13.05:372,13,0	1/1:2,12:14:13.05:372,13,0
chr10	77414610	.	G	GA	8689.17	PASS	AB=0.769;AC=46;AF=0.821;AN=56;BaseQRankSum=-6.891;DP=427;FS=8.344;HRun=9;HaplotypeScore=44.2209;InbreedingCoeff=0.7358;MQ=60.75;MQ0=1;MQRankSum=-0.452;QD=24.90;ReadPosRankSum=-0.392;VQSLOD=5.0786;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:62.96:0,63,543	1/1:1,6:7:18.05:199,18,0	0/1:9,0:8:4.06:4,0,86	0/0:8,0:4:8.49:0,8,62	0/0:25,0:25:62.97:0,63,544	1/1:0,17:18:50.97:545,51,0	1/1:1,8:9:21.06:232,21,0	1/1:2,23:25:60.63:657,61,0	1/1:2,3:5:9.02:100,9,0	1/1:2,19:21:51.14:564,51,0	1/1:5,11:17:29.91:313,30,0	1/1:2,16:18:42.11:465,42,0	1/1:2,14:16:19.07:438,19,0	1/1:2,5:7:15.04:166,15,0	1/1:0,10:10:24.06:265,24,0	1/1:1,12:13:36.10:398,36,0	1/1:7,21:28:29.08:526,29,0	1/1:1,8:9:1.02:239,1,0	1/1:9,24:32:86.87:905,87,0	1/1:2,15:17:39.54:419,40,0	1/1:1,5:6:18.03:189,18,0	1/1:0,8:8:21.06:232,21,0	1/1:3,7:10:18.05:199,18,0	1/1:1,10:11:27.07:299,27,0	0/0:20,0:20:56.99:0,57,495	1/1:4,21:25:63.14:677,63,0	1/1:2,16:19:44.95:479,45,0	0/1:1,6:7:5:178,0,5
chr10	77415047	.	ATGTCTT	A	1741.15	PASS	AB=0.964;AC=12;AF=0.222;AN=54;BaseQRankSum=3.300;DP=409;FS=8.994;HRun=0;HaplotypeScore=113.0849;InbreedingCoeff=0.7596;MQ=63.51;MQ0=0;MQRankSum=-8.580;QD=26.38;ReadPosRankSum=1.523;VQSLOD=2.8836;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:75.26:0,75,2447	0/0:15,0:15:39.13:0,39,1237	0/0:10,0:10:17.26:0,17,384	0/1:10,0:9:14.92:15,0,101	0/0:23,0:23:54.15:0,54,1758	0/0:17,0:17:51.18:0,51,1743	0/0:9,0:9:18.06:0,18,601	0/0:30,0:29:55.32:0,55,2123	1/1:2,8:10:27.09:582,27,0	0/0:14,0:14:39.13:0,39,1263	0/0:19,0:18:51.18:0,51,1692	1/1:1,7:8:21.07:475,21,0	1/1:0,6:6:18.06:388,18,0	0/0:8,0:8:21.07:0,21,679	0/0:16,0:16:45.09:0,45,1416	0/1:12,1:13:35.06:35,0,914	0/0:21,0:21:48.16:0,48,1549	0/0:7,0:7:18.06:0,18,615	0/0:20,0:19:45.15:0,45,1493	0/0:18,0:18:45.12:0,45,1360	0/0:18,0:18:54.17:0,54,1666	1/1:2,7:4:9.03:191,9,0	./.	1/1:4,5:9:12.04:229,12,0	0/0:16,0:16:48.14:0,48,1464	0/0:18,0:18:51.17:0,51,1738	0/0:17,0:16:47.37:0,47,1537	0/0:12,0:12:33.11:0,33,1084
chr10	77415069	.	TA	T	8307.89	PASS	AB=0.522;AC=33;AF=0.589;AN=56;BaseQRankSum=-3.439;DP=409;FS=3.966;HRun=5;HaplotypeScore=60.1285;InbreedingCoeff=0.8728;MQ=68.32;MQ0=0;MQRankSum=1.969;QD=29.99;ReadPosRankSum=-0.063;VQSLOD=5.2406;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.18:0,75,985	1/1:3,9:12:27.07:306,27,0	0/0:12,0:11:22.64:0,23,267	0/0:10,0:10:13.17:0,13,193	0/0:25,0:25:57.19:0,57,779	1/1:1,21:22:63.18:715,63,0	1/1:0,10:10:24.07:272,24,0	1/1:1,26:27:75.19:834,75,0	0/0:10,0:10:21.04:0,21,267	1/1:0,14:14:42.12:476,42,0	1/1:2,15:16:39.11:442,39,0	0/0:8,0:8:24.08:0,24,328	0/0:6,0:6:12.04:0,12,161	1/1:2,9:11:27.07:304,27,0	1/1:0,14:14:36.10:408,36,0	0/1:1,11:12:10.92:276,0,11	1/1:0,20:20:54.15:612,54,0	1/1:0,12:12:33.09:374,33,0	1/1:2,19:21:54.15:612,54,0	1/1:0,21:21:57.16:646,57,0	1/1:1,16:17:48.14:545,48,0	0/0:5,0:2:3.01:0,3,41	0/0:6,0:2:6.02:0,6,82	0/0:8,0:8:8.94:0,9,81	0/0:15,0:14:39.13:0,39,533	1/1:1,20:21:60.15:669,60,0	1/1:1,15:15:42.12:476,42,0	1/1:0,10:10:30.09:340,30,0
chr10	77416278	.	C	CT	5389.90	PASS	AB=0.591;AC=46;AF=0.852;AN=54;BaseQRankSum=-5.111;DP=332;FS=6.570;HRun=9;HaplotypeScore=37.0575;InbreedingCoeff=0.5314;MQ=56.23;MQ0=16;MQRankSum=-0.033;QD=18.65;ReadPosRankSum=1.005;VQSLOD=4.5689;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:23:50.98:0,51,443	1/1:0,7:7:18.05:199,18,0	0/0:8,0:7:17.94:0,18,145	0/0:5,0:3:8.80:0,9,65	1/1:2,0:10:19.89:99,20,0	0/1:3,15:17:10:356,0,10	1/1:1,1:2:2.94:18,3,0	1/1:14,20:24:25.07:497,25,0	1/1:4,0:8:14.20:71,14,0	1/1:5,13:18:47.68:489,48,0	1/1:2,13:15:36.10:398,36,0	1/1:0,0:5:8.52:42,9,0	1/1:1,0:5:8.58:44,9,0	1/1:2,3:4:3.01:33,3,0	1/1:2,7:8:18.05:199,18,0	1/1:1,3:3:9.02:100,9,0	1/1:4,8:12:24.06:265,24,0	1/1:3,11:14:10.03:324,10,0	1/1:7,13:19:45.11:488,45,0	1/1:5,13:18:36.09:398,36,0	1/1:1,5:6:9.02:100,9,0	./.	1/1:2,0:8:20.08:113,20,0	1/1:1,0:3:2.84:14,3,0	1/1:2,0:16:28.41:142,28,0	1/1:6,14:20:42.09:448,42,0	1/1:7,14:20:42.11:465,42,0	0/1:3,4:7:14.02:88,0,14
chr10	77417043	.	CAT	C	118.04	PASS	AB=0.835;AC=4;AF=0.071;AN=56;BaseQRankSum=5.983;DP=790;FS=7.498;HRun=0;HaplotypeScore=165.2367;InbreedingCoeff=-0.0874;MQ=53.81;MQ0=57;MQRankSum=-3.767;QD=1.19;ReadPosRankSum=-0.986;VQSLOD=2.1069;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:26:47.83:0,48,414	0/0:11,0:9:18.88:0,19,185	0/0:26,0:13:19.50:0,19,302	0/0:33,0:22:28.90:0,29,404	0/0:23,0:18:24.85:0,25,188	0/0:26,1:25:4.46:0,4,171	0/0:40,0:34:42.26:0,42,505	0/1:26,9:29:75.94:76,0,425	0/0:24,0:22:27.12:0,27,182	0/1:17,8:25:79.46:79,0,381	0/1:19,7:25:2.61:3,0,208	0/0:29,0:29:37.18:0,37,303	0/0:15,0:15:20.61:0,21,210	0/0:35,0:27:28.79:0,29,286	0/0:27,0:20:35.78:0,36,306	0/0:25,0:24:11.64:0,12,293	0/0:41,0:40:26.69:0,27,645	0/0:31,0:27:7.64:0,8,428	0/0:29,0:21:42.28:0,42,349	0/0:16,5:18:41.93:0,42,395	0/0:88,0:80:12.51:0,13,839	0/0:25,0:24:18.13:0,18,130	0/0:13,0:12:17.96:0,18,160	0/0:37,0:34:62.58:0,63,557	0/0:9,0:6:7.55:0,8,54	0/0:34,0:28:9.69:0,10,419	0/0:18,0:16:21.67:0,22,215	0/1:13,0:11:61.47:61,0,67
chr10	77417044	.	A	ATG	1613.92	PASS	AB=0.974;AC=33;AF=0.660;AN=50;BaseQRankSum=-0.692;DP=813;FS=4.248;HRun=0;HaplotypeScore=165.8754;InbreedingCoeff=-0.0937;MQ=52.46;MQ0=58;MQRankSum=1.539;QD=2.55;ReadPosRankSum=-2.123;VQSLOD=2.3461;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:26:3:0,3,31	0/1:10,0:8:16.28:16,0,26	./.	./.	0/0:22,0:18:2.54:0,3,14	1/1:28,1:26:8.90:123,9,0	1/1:42,0:36:8.99:88,9,0	./.	1/1:24,0:22:8.97:70,9,0	1/1:25,0:25:3:25,3,0	0/1:25,1:25:14.36:36,0,14	1/1:29,0:29:6.01:67,6,0	1/1:15,0:15:2.99:23,3,0	0/1:37,1:29:33.90:86,0,34	0/0:26,0:19:3:0,3,32	0/1:26,0:24:48.13:74,0,48	1/1:35,9:44:16.06:258,16,0	0/1:30,1:27:50.90:69,0,51	1/1:29,1:21:3.01:44,3,0	0/1:21,0:18:20.85:65,0,21	0/1:92,0:85:11.08:139,0,11	1/1:25,0:24:6:58,6,0	1/1:15,0:14:3.01:39,3,0	1/1:37,0:35:16.92:178,17,0	0/0:7,0:5:2.84:0,3,14	0/1:35,0:28:15.17:237,0,15	0/1:17,2:18:10.59:21,0,11	1/1:13,0:11:3.01:42,3,0
chr10	77417076	.	G	GTGTA	942.12	PASS	AB=0.795;AC=10;AF=0.179;AN=56;BaseQRankSum=3.009;DP=729;FS=3.316;HRun=0;HaplotypeScore=136.2285;InbreedingCoeff=0.1400;MQ=41.28;MQ0=70;MQRankSum=0.821;QD=4.36;ReadPosRankSum=6.207;VQSLOD=2.0494;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:22:29.94:0,30,271	0/0:11,0:10:23.12:0,23,210	0/0:20,0:3:5.94:0,6,41	0/0:33,0:5:8.98:0,9,72	0/0:18,0:9:5.42:0,5,54	0/0:27,0:24:18.80:0,19,131	0/1:40,0:31:23.73:24,0,252	0/0:19,0:10:26.94:0,27,220	1/1:12,8:17:8.92:236,9,0	0/0:17,0:16:42.38:0,42,346	0/0:18,0:17:12.83:0,13,110	0/1:28,1:28:61.32:61,0,94	0/1:3,8:12:12.02:75,0,12	0/0:39,0:28:39.18:0,39,329	0/0:28,0:20:29.95:0,30,272	0/0:29,0:25:23.86:0,24,339	0/0:50,0:43:61.76:0,62,429	0/0:30,0:26:38.21:0,38,442	0/0:9,0:4:5.70:0,6,32	0/0:13,0:13:1.95:0,2,171	0/0:74,0:66:51.20:0,51,779	1/1:6,9:17:6.01:106,6,0	0/1:4,0:15:14.75:31,0,15	0/1:21,18:29:17.92:459,0,18	0/0:14,0:12:20.71:0,21,148	0/1:34,0:27:95.15:95,0,405	0/0:26,0:24:35.17:0,35,296	0/0:9,0:8:2.18:0,2,117
chr10	77417078	.	G	GTA	381.61	PASS	AB=0.969;AC=13;AF=0.232;AN=56;BaseQRankSum=6.600;DP=714;FS=6.954;HRun=0;HaplotypeScore=118.4544;InbreedingCoeff=0.0592;MQ=41.16;MQ0=68;MQRankSum=2.232;QD=1.40;ReadPosRankSum=8.054;VQSLOD=0.1218;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:22:29.93:0,30,259	0/0:11,0:10:27.86:0,28,244	0/0:22,0:3:8.89:0,9,60	0/0:33,0:3:8.98:0,9,74	0/0:15,0:7:8.89:0,9,65	0/1:26,0:23:30.87:31,0,116	0/0:38,0:31:14.33:0,14,272	0/0:19,0:10:29.92:0,30,239	1/1:24,0:17:8.91:93,9,0	0/0:16,0:15:42.37:0,42,342	0/1:19,0:18:1.97:2,0,87	0/1:18,8:28:51.23:51,0,94	0/1:13,0:12:11.97:27,0,12	0/0:40,0:29:5.65:0,6,279	0/0:26,0:19:32.94:0,33,285	0/0:30,0:26:11.42:0,11,317	0/1:47,0:40:40.46:40,0,372	0/0:29,0:25:22.60:0,23,393	0/1:11,0:5:10.17:10,0,22	0/0:11,0:11:2:0,2,156	0/0:73,0:64:71.15:0,71,773	1/1:15,0:14:6.16:44,6,0	0/1:15,0:14:18.66:30,0,19	0/1:39,0:26:4.26:192,0,4	0/0:14,0:13:20.61:0,21,135	0/1:35,0:28:11.22:11,0,416	0/0:26,0:24:35.09:0,35,268	0/0:9,0:8:2.21:0,2,117
chr10	77418617	.	CT	C	3805.58	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=10.886;DP=691;FS=5.172;HRun=2;HaplotypeScore=77.4423;InbreedingCoeff=0.9846;MQ=42.83;MQ0=84;MQRankSum=1.430;QD=26.61;ReadPosRankSum=2.879;VQSLOD=3.2547;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,102,1503	0/0:11,0:11:33.11:0,33,493	./.	./.	0/0:25,0:24:51.17:0,51,764	0/0:20,0:20:36.07:0,36,486	0/0:24,0:19:54.18:0,54,806	0/0:32,0:28:81.21:0,81,1163	1/1:0,25:24:48.16:622,48,0	0/0:23,0:23:66.22:0,66,986	0/0:8,0:8:15.05:0,15,225	1/1:0,18:17:42.13:545,42,0	1/1:0,25:25:63.20:817,63,0	0/0:18,0:18:36.12:0,36,537	0/0:27,0:27:75.23:0,75,1098	0/0:20,0:20:60.19:0,60,862	0/0:45,0:41:93.30:0,93,1369	0/0:27,0:27:57.13:0,57,799	0/0:34,0:26:66.20:0,66,955	0/0:21,0:18:51.16:0,51,745	0/0:26,0:24:63.21:0,63,935	1/1:0,20:19:39.13:505,39,0	1/1:2,18:18:33.11:425,33,0	1/1:2,33:32:69.22:892,69,0	0/0:15,0:15:36.11:0,36,539	0/0:40,0:39:99:0,117,1698	0/0:21,0:21:48.04:0,48,614	0/0:4,0:3:9.03:0,9,135
chr10	77419907	.	A	AAT	1091.39	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.153;DP=609;FS=8.913;HRun=0;HaplotypeScore=85.0510;InbreedingCoeff=0.9480;MQ=67.66;MQ0=4;MQRankSum=-2.023;QD=29.50;ReadPosRankSum=-1.050;VQSLOD=4.6809;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.23:0,69,1033	0/0:14,0:14:42.14:0,42,634	0/0:28,0:27:65.80:0,66,907	0/0:18,0:17:41.87:0,42,593	1/1:3,25:22:54.12:981,54,0	0/0:31,0:29:84.24:0,84,1243	0/0:9,0:9:27.09:0,27,408	0/0:36,0:34:99:0,105,1563	0/0:12,0:6:12:0,12,156	0/0:29,0:29:84.28:0,84,1269	0/0:28,0:28:84.27:0,84,1234	0/0:10,0:6:12:0,12,156	0/0:14,0:10:18.06:0,18,272	0/0:15,0:15:45.13:0,45,657	0/0:23,0:23:69.22:0,69,1012	0/0:24,0:22:66.19:0,66,972	0/0:16,0:16:48.13:0,48,699	0/0:22,0:21:63.14:0,63,884	0/0:26,0:25:75.25:0,75,1116	0/0:31,0:31:93.29:0,93,1355	0/0:12,0:12:36.10:0,36,523	0/0:33,0:28:78.20:0,78,1129	0/0:23,0:15:39.12:0,39,558	0/0:11,0:11:30.02:0,30,402	1/1:0,7:7:12.04:227,12,0	0/0:27,0:27:81.26:0,81,1190	0/0:42,0:42:99:0,120,1741	0/0:13,0:13:39.13:0,39,590
chr10	77420056	.	A	AG	338.27	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=9.013;DP=736;FS=45.249;HRun=0;HaplotypeScore=76.7394;InbreedingCoeff=0.8308;MQ=38.29;MQ0=134;MQRankSum=-7.534;QD=3.98;ReadPosRankSum=-0.885;VQSLOD=1.1949;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:66.20:0,66,904	0/0:16,0:13:39.13:0,39,545	0/0:19,0:1:3.01:0,3,42	0/0:29,0:3:9.03:0,9,126	1/1:6,13:13:22.69:113,23,0	0/0:35,0:27:57.15:0,57,774	0/0:22,0:18:33.11:0,33,461	0/0:45,0:28:81.26:0,81,1116	1/1:5,9:6:17.26:92,17,0	0/0:38,0:35:99:0,105,1449	0/0:40,0:26:69.19:0,69,941	1/1:0,11:3:5.78:31,6,0	1/1:2,6:2:2.88:15,3,0	0/0:27,0:22:51.12:0,51,675	0/0:32,0:26:75.25:0,75,1048	0/0:34,0:28:78.22:0,78,1064	0/0:34,0:29:78.22:0,78,1068	0/0:26,0:22:57.19:0,57,797	0/0:38,0:22:63.20:0,63,861	0/0:36,0:30:75.15:0,75,978	0/0:47,0:44:99:0,108,1488	1/1:4,6:5:7.27:33,7,0	1/1:3,3:2:2.84:14,3,0	1/1:3,5:4:2.75:14,3,0	1/1:1,8:8:20.61:204,21,0	0/0:41,0:32:96.31:0,96,1326	0/0:50,0:37:93.30:0,93,1283	0/0:14,0:12:36.12:0,36,503
chr10	77420998	.	C	CA	11874.88	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-2.177;DP=610;FS=0.000;HRun=7;HaplotypeScore=99.0791;InbreedingCoeff=0.9693;MQ=75.05;MQ0=9;MQRankSum=-2.004;QD=25.81;ReadPosRankSum=1.929;VQSLOD=4.8980;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,102,986	1/1:6,0:6:15.02:158,15,0	0/0:58,0:33:41.67:0,42,429	0/0:48,0:22:22.16:0,22,208	1/1:7,18:25:58.39:652,58,0	1/1:20,6:26:60.12:672,60,0	1/1:18,3:21:50.34:551,50,0	1/1:15,15:31:70.12:782,70,0	1/1:15,5:20:40.68:585,41,0	1/1:7,6:12:29.18:292,29,0	1/1:10,2:12:21:222,21,0	1/1:10,7:17:45.08:491,45,0	1/1:4,7:11:30.08:346,30,0	1/1:10,10:20:60.14:693,60,0	1/1:14,4:18:47.86:490,48,0	1/1:11,5:16:45.12:518,45,0	1/1:14,6:20:48.05:528,48,0	1/1:20,11:31:78.21:964,78,0	1/1:22,9:30:54:553,54,0	1/1:13,4:16:36.02:389,36,0	1/1:10,6:16:24.04:272,24,0	1/1:3,1:4:9.02:96,9,0	1/1:11,6:16:33.03:353,33,0	1/1:11,5:16:30.08:346,30,0	1/1:6,7:13:23.88:270,24,0	1/1:9,12:21:52.85:545,53,0	1/1:17,6:23:53.74:605,54,0	1/1:10,5:15:42.13:500,42,0
chr10	77421011	.	TA	T	7477.35	PASS	AB=0.808;AC=49;AF=0.875;AN=56;BaseQRankSum=2.158;DP=598;FS=16.488;HRun=12;HaplotypeScore=116.2242;InbreedingCoeff=0.4773;MQ=79.03;MQ0=8;MQRankSum=-2.437;QD=14.81;ReadPosRankSum=-0.167;VQSLOD=3.7721;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,99,989	1/1:4,2:6:17.93:139,18,0	0/1:50,5:34:22.86:23,0,161	0/0:49,0:25:3.21:0,3,188	1/1:9,0:25:30.54:108,31,0	1/1:12,8:20:23.34:361,23,0	1/1:14,4:18:47.81:371,48,0	1/1:8,22:30:71.59:544,72,0	1/1:12,10:22:36:437,36,0	1/1:5,12:16:38.83:300,39,0	0/1:7,5:12:0.43:176,0,0	1/1:6,7:14:34.91:260,35,0	1/1:8,4:12:20.86:158,21,0	1/1:12,9:21:53.68:405,54,0	1/1:9,8:17:47.74:363,48,0	1/1:13,4:17:38.84:302,39,0	1/1:9,8:17:41.81:323,42,0	1/1:24,8:33:79.60:596,80,0	1/1:11,16:27:68.70:533,69,0	1/1:10,9:19:46.85:354,47,0	0/1:9,2:12:12.83:86,0,13	1/1:3,1:4:11.95:91,12,0	1/1:10,12:22:44.79:347,45,0	1/1:8,5:14:28.90:210,29,0	1/1:2,0:12:16.93:52,17,0	1/1:10,7:17:20.70:258,21,0	1/1:12,7:19:50.70:384,51,0	1/1:14,5:19:38.78:297,39,0
chr10	77421654	.	GA	G	818.34	PASS	AB=0.786;AC=12;AF=0.214;AN=56;BaseQRankSum=8.609;DP=518;FS=4.575;HRun=10;HaplotypeScore=49.9987;InbreedingCoeff=0.7763;MQ=57.84;MQ0=29;MQRankSum=-6.155;QD=7.44;ReadPosRankSum=1.126;VQSLOD=1.2711;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:29:55.18:0,55,820	0/0:7,0:5:12.03:0,12,133	0/0:37,0:13:26.97:0,27,258	0/0:28,0:8:20.87:0,21,182	0/0:18,0:19:44.95:0,45,478	0/0:20,1:21:28.12:0,28,529	0/0:19,0:19:48.13:0,48,531	0/0:33,0:32:71.21:0,71,798	1/1:1,16:16:32.97:286,33,0	0/0:23,0:19:42.11:0,42,458	0/1:12,1:10:1.92:2,0,208	1/1:5,12:17:32.96:282,33,0	1/1:3,10:11:23.98:203,24,0	0/0:7,0:7:18.04:0,18,191	0/0:12,1:13:10.08:0,10,339	0/0:13,0:13:33.09:0,33,365	0/0:29,1:30:55.13:0,55,810	0/0:23,0:22:54.15:0,54,597	0/0:14,1:14:10.15:0,10,339	0/0:20,1:16:33.05:0,33,352	0/0:8,0:8:24.01:0,24,251	1/1:4,16:11:8.99:78,9,0	0/1:8,10:15:14.89:20,0,15	1/1:2,10:11:14.88:120,15,0	0/0:14,1:15:13.12:0,13,372	0/0:22,0:20:54.14:0,54,590	0/0:17,0:16:42.06:0,42,440	0/0:6,0:4:12.03:0,12,133
chr10	77421729	.	T	TA	1670.91	PASS	AB=0.800;AC=12;AF=0.214;AN=56;BaseQRankSum=-2.660;DP=541;FS=2.234;HRun=10;HaplotypeScore=61.7994;InbreedingCoeff=0.6950;MQ=57.78;MQ0=2;MQRankSum=2.874;QD=14.16;ReadPosRankSum=0.257;VQSLOD=3.7786;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:56.88:0,57,468	0/0:6,0:5:5.99:0,6,49	0/0:17,0:13:0.60:0,1,111	0/0:13,0:8:20.08:0,20,131	0/0:2,0:18:25.78:0,26,82	0/0:19,0:19:38.91:0,39,320	0/0:21,1:22:17.98:0,18,339	0/0:23,1:23:21.91:0,22,385	1/1:6,12:18:38.89:386,39,0	0/0:31,0:26:62.29:0,62,500	0/1:18,0:13:3.26:3,0,123	1/1:9,9:18:8.44:292,8,0	1/1:2,12:14:30.08:320,30,0	0/0:18,0:19:31.51:0,32,305	0/0:10,0:13:25.03:0,25,184	0/0:17,0:17:35.92:0,36,296	0/0:29,0:31:70.89:0,71,563	0/0:15,1:16:0.96:0,1,214	0/0:25,0:24:47.85:0,48,388	0/0:28,0:24:50.91:0,51,415	0/0:18,0:18:38.88:0,39,315	1/1:4,2:6:14.88:128,15,0	1/1:5,19:23:26.30:473,26,0	0/1:6,12:17:34.50:240,0,35	0/0:4,0:22:31.01:0,31,89	0/0:21,0:21:53.89:0,54,439	0/0:21,0:20:50.91:0,51,418	0/0:13,0:13:38.95:0,39,320
chr10	77422036	.	A	AATG	975.44	PASS	AC=16;AF=0.444;AN=36;BaseQRankSum=-3.486;DP=526;FS=13.489;HRun=0;HaplotypeScore=31.5245;InbreedingCoeff=0.7649;MQ=36.46;MQ0=143;MQRankSum=-5.900;QD=8.56;ReadPosRankSum=-0.871;VQSLOD=0.6511;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:33:27.09:0,27,439	./.	0/0:29,0:6:18.06:0,18,284	./.	0/0:36,0:35:81.28:0,81,1323	./.	1/1:1,10:2:6.02:85,6,0	1/1:12,15:8:21.07:475,21,0	0/0:26,0:23:18.06:0,18,300	1/1:1,17:6:6.02:136,6,0	1/1:6,18:7:3.01:52,3,0	0/0:36,0:29:33.11:0,33,545	0/0:22,0:20:9.03:0,9,150	./.	./.	1/1:4,1:1:3.01:55,3,0	./.	1/1:3,1:3:3.01:68,3,0	./.	./.	./.	0/0:21,0:17:39.13:0,39,650	0/0:30,0:29:63.21:0,63,996	0/0:25,0:20:15.01:0,15,207	0/0:20,0:20:48.16:0,48,755	1/1:6,9:5:9.03:204,9,0	./.	1/1:4,4:3:3.01:46,3,0
chr10	77423195	.	A	AAATTTG	813.25	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-2.977;DP=399;FS=4.172;HRun=0;HaplotypeScore=95.4647;InbreedingCoeff=0.6601;MQ=60.77;MQ0=16;MQRankSum=-2.816;QD=21.98;ReadPosRankSum=-0.357;VQSLOD=2.8944;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:9:21.07:0,21,447	0/0:10,0:10:30.10:0,30,665	0/0:4,0:3:6.02:0,6,133	0/1:7,0:5:20.40:20,0,59	1/1:5,10:11:14.97:304,15,0	0/0:17,0:16:42.14:0,42,913	0/0:15,0:15:39.13:0,39,844	0/0:24,0:21:51.17:0,51,1072	0/0:17,0:17:36.12:0,36,747	0/0:22,0:22:60.19:0,60,1235	0/0:20,0:20:47.75:0,48,1022	0/0:19,0:17:51.17:0,51,1110	0/0:7,0:7:17.99:0,18,349	0/0:14,0:13:39.13:0,39,863	0/0:15,0:15:39.12:0,39,789	0/0:18,0:15:42.14:0,42,914	0/0:15,0:15:42.12:0,42,888	0/0:10,0:10:24.08:0,24,508	0/0:11,0:11:30.10:0,30,647	0/0:26,0:24:59.23:0,59,1222	0/0:7,0:7:15.05:0,15,333	0/0:8,0:8:15:0,15,285	0/0:17,0:17:42.14:0,42,932	0/0:5,0:4:3.01:0,3,67	1/1:5,10:12:18.06:613,18,0	0/0:23,0:22:60.21:0,60,1289	0/0:21,0:18:48.16:0,48,1064	0/0:7,0:7:12.04:0,12,266
chr10	77424692	.	GA	G	3199.05	PASS	AB=0.715;AC=37;AF=0.661;AN=56;BaseQRankSum=-2.682;DP=633;FS=7.818;HRun=13;HaplotypeScore=74.1193;InbreedingCoeff=0.5178;MQ=62.51;MQ0=20;MQRankSum=-2.417;QD=7.41;ReadPosRankSum=2.503;VQSLOD=2.4055;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,4:39:50.13:0,50,626	1/1:3,6:9:8.93:66,9,0	0/1:61,0:17:17.39:17,0,19	0/0:67,0:31:26.93:0,27,146	1/1:9,1:28:35.37:116,35,0	0/1:5,9:13:25.54:160,0,26	1/1:6,20:24:14.60:238,15,0	1/1:7,12:18:32.09:222,32,0	0/0:10,0:7:8.97:0,9,77	1/1:13,11:23:8.63:217,9,0	1/1:5,6:10:13.97:93,14,0	0/1:9,3:10:12.88:13,0,49	0/0:14,0:14:20.85:0,21,169	1/1:3,8:11:16.93:115,17,0	1/1:9,17:24:38.75:284,39,0	0/1:5,11:16:2.45:148,0,2	0/1:6,17:20:39.47:237,0,39	1/1:9,12:19:15.37:273,15,0	1/1:8,10:18:3.56:188,4,0	1/1:9,15:24:28.86:203,29,0	1/1:3,5:7:11.93:88,12,0	0/0:19,2:19:16.91:0,17,283	0/0:19,1:19:1.62:0,2,130	0/0:29,0:27:52.24:0,52,577	1/1:4,0:24:38.69:112,39,0	1/1:4,14:19:42.80:292,43,0	1/1:7,15:22:38.76:284,39,0	1/1:7,0:7:4.98:25,5,0
chr10	77425201	.	T	TAGGTAAGC	3759.32	PASS	AB=1.000;AC=5;AF=0.096;AN=52;BaseQRankSum=-2.344;DP=287;FS=9.376;HRun=0;HaplotypeScore=98.4579;InbreedingCoeff=0.7040;MQ=44.01;MQ0=9;MQRankSum=-7.034;QD=63.72;ReadPosRankSum=-1.978;VQSLOD=2.8179;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:42.14:0,42,1102	0/0:8,0:8:24.08:0,24,651	./.	./.	1/1:11,24:27:63.22:2381,63,0	0/0:9,0:9:21.07:0,21,569	0/0:10,0:8:24.08:0,24,618	0/0:10,0:5:9.03:0,9,244	0/1:9,0:9:2.35:2,0,539	0/0:13,0:13:39.13:0,39,1058	0/0:14,0:14:39.11:0,39,944	0/0:5,0:5:12.04:0,12,325	0/0:2,0:2:6.02:0,6,144	0/0:8,0:8:21.07:0,21,569	0/0:19,0:17:51.18:0,51,1334	0/0:10,0:10:21.07:0,21,569	0/0:9,0:9:21.07:0,21,569	0/0:11,0:11:27.09:0,27,730	0/0:3,0:2:6.02:0,6,163	0/0:13,0:13:39.13:0,39,1057	0/0:5,0:5:15.05:0,15,371	0/0:13,0:12:27.09:0,27,707	0/0:15,0:14:33.11:0,33,895	0/0:7,0:7:12.51:0,13,327	1/1:1,12:14:34.36:1376,34,0	0/0:10,0:10:29.77:0,30,742	0/0:12,0:12:36.12:0,36,976	0/0:4,0:4:9.03:0,9,244
chr10	77426327	.	T	TA	2152.81	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-9.893;DP=486;FS=3.694;HRun=8;HaplotypeScore=44.7458;InbreedingCoeff=0.9547;MQ=62.28;MQ0=0;MQRankSum=1.288;QD=24.46;ReadPosRankSum=1.396;VQSLOD=4.2605;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:62.96:0,63,562	0/0:2,0:2:6:0,6,55	0/0:5,0:5:15.01:0,15,136	0/0:4,0:4:8.68:0,9,66	0/0:31,0:31:90.04:0,90,820	0/0:14,0:15:38.05:0,38,335	0/0:14,0:14:39:0,39,348	0/0:30,0:30:81.02:0,81,736	1/1:2,19:21:45.13:519,45,0	0/0:25,0:25:60.01:0,60,544	0/0:22,0:22:60.03:0,60,549	1/1:0,21:21:51.08:572,51,0	1/1:2,11:13:30.09:346,30,0	0/0:9,0:9:27.01:0,27,247	0/0:13,0:13:33.02:0,33,302	0/0:12,0:12:33.02:0,33,302	0/0:31,0:31:81.04:0,81,741	0/0:20,0:20:51.01:0,51,466	0/0:10,0:10:24.01:0,24,218	0/0:27,0:27:75.03:0,75,683	0/0:10,0:10:30:0,30,269	1/1:1,8:9:18.05:208,18,0	1/1:1,19:20:48.14:554,48,0	1/1:0,4:4:12.04:138,12,0	0/0:18,0:18:48.02:0,48,435	0/0:29,0:29:71.95:0,72,638	0/0:26,0:26:72.02:0,72,654	0/0:22,0:22:66.04:0,66,603
chr10	77426653	.	AG	A	4338.99	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.553;DP=630;FS=4.109;HRun=1;HaplotypeScore=64.1509;InbreedingCoeff=0.9987;MQ=90.29;MQ0=0;MQRankSum=-1.943;QD=33.64;ReadPosRankSum=2.966;VQSLOD=4.7528;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1700	0/0:14,0:14:42.14:0,42,671	0/0:37,0:37:99:0,105,1627	0/0:29,0:29:81.24:0,81,1258	0/0:27,0:27:81.28:0,81,1292	0/0:17,0:17:51.16:0,51,791	0/0:21,0:21:63.21:0,63,995	0/0:36,0:36:99:0,105,1655	1/1:0,22:18:45.15:629,45,0	0/0:28,0:28:81.28:0,81,1294	0/0:18,0:18:54.17:0,54,840	1/1:0,21:19:42.14:587,42,0	1/1:0,14:12:21.07:294,21,0	0/0:15,0:15:45.15:0,45,717	0/0:22,0:22:66.23:0,66,1055	0/0:23,0:23:69.24:0,69,1103	0/0:22,0:22:66.22:0,66,1039	0/0:8,0:8:24.08:0,24,383	0/0:14,0:14:39.13:0,39,622	0/0:29,0:29:87.28:0,87,1357	0/0:18,0:18:54.18:0,54,863	1/1:0,21:21:60.20:839,60,0	1/1:0,32:32:89.80:1235,90,0	1/1:0,19:19:54.18:755,54,0	0/0:23,0:23:69.22:0,69,1079	0/0:23,0:23:69.22:0,69,1079	0/0:22,0:22:66.21:0,66,1024	0/0:19,0:19:54.18:0,54,863
chr10	77429799	.	A	AC	2109.08	PASS	AB=0.678;AC=40;AF=0.714;AN=56;BaseQRankSum=-4.264;DP=369;FS=4.096;HRun=10;HaplotypeScore=40.7402;InbreedingCoeff=0.3697;MQ=49.44;MQ0=42;MQRankSum=-2.003;QD=8.47;ReadPosRankSum=-0.665;VQSLOD=1.0412;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,2:36:30.39:0,30,446	1/1:7,0:7:3.98:58,4,0	0/0:34,0:5:4.14:0,4,14	0/0:31,0:5:4.46:0,4,16	0/0:5,0:5:10.95:0,11,38	1/1:3,8:9:3.01:32,3,0	1/1:6,8:13:18.05:191,18,0	1/1:5,6:10:15.85:137,16,0	1/1:6,0:8:8.32:45,8,0	0/1:3,6:9:1.67:145,0,2	1/1:4,9:12:9.14:106,9,0	0/1:2,0:4:0:0,0,0	1/1:2,0:8:11.71:74,12,0	0/1:8,1:8:3.05:96,0,3	1/1:2,9:10:6.01:64,6,0	1/1:3,3:5:6.02:64,6,0	1/1:19,9:25:27.80:318,28,0	1/1:16,10:23:11.89:387,12,0	1/1:9,0:9:8.02:64,8,0	0/1:4,4:8:18.72:39,0,19	0/1:3,4:7:8.19:55,0,8	1/1:4,0:6:4.41:20,4,0	1/1:5,1:9:0.89:2,1,0	1/1:3,0:5:5.96:44,6,0	0/0:13,0:12:23.76:0,24,77	0/1:4,8:11:6.82:101,0,7	1/1:16,0:17:30.88:208,31,0	1/1:8,0:3:2.92:17,3,0
chr10	77429808	.	CCA	C	525.63	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=-1.970;DP=385;FS=0.000;HRun=0;HaplotypeScore=51.4509;InbreedingCoeff=0.3858;MQ=58.07;MQ0=40;MQRankSum=2.598;QD=6.65;ReadPosRankSum=0.859;VQSLOD=2.7630;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:89.60:0,90,1287	0/1:7,0:7:7.06:7,0,66	0/0:48,0:12:2.89:0,3,177	0/1:38,0:9:3.24:3,0,61	1/1:1,4:5:14.96:186,15,0	0/1:12,0:10:0.96:1,0,46	0/0:11,0:11:4.47:0,4,268	0/0:11,0:10:29.99:0,30,318	0/0:6,0:5:11.72:0,12,126	0/0:10,0:10:29.90:0,30,298	0/0:14,0:14:23.75:0,24,216	0/0:3,0:3:1.25:0,1,3	0/0:7,0:7:12.03:0,12,144	0/0:9,0:8:17.88:0,18,153	0/0:11,0:10:12.02:0,12,130	0/1:5,0:4:3.70:4,0,64	0/0:28,0:25:56.93:0,57,586	0/0:27,0:24:41.26:0,41,645	0/0:9,0:9:23.97:0,24,230	0/0:8,0:8:18.02:0,18,202	0/0:9,0:9:17.91:0,18,157	0/0:5,0:4:6.02:0,6,72	0/0:9,0:8:5.99:0,6,57	0/0:6,0:6:12.27:0,12,101	1/1:0,12:12:33.11:450,33,0	0/0:12,0:11:23.87:0,24,245	0/0:20,0:20:44.91:0,45,415	0/0:8,0:4:6:0,6,54
chr10	77429809	.	C	CCA	1091.30	PASS	AB=0.965;AC=25;AF=0.463;AN=54;BaseQRankSum=1.247;DP=391;FS=4.005;HRun=0;HaplotypeScore=57.1623;InbreedingCoeff=-0.3703;MQ=59.30;MQ0=40;MQRankSum=-1.869;QD=3.94;ReadPosRankSum=4.063;VQSLOD=1.2768;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:36:61.97:0,62,818	0/1:5,1:6:1.98:82,0,2	0/0:51,0:14:21.53:0,22,144	0/1:39,0:9:21.33:29,0,21	0/0:6,0:6:13.98:0,14,65	0/1:13,0:11:9.80:26,0,10	0/1:11,0:11:9.04:34,0,9	0/1:9,0:10:31.38:31,0,60	0/1:5,0:5:8.57:73,0,9	0/1:10,0:10:72.54:85,0,73	0/1:14,0:14:20.03:47,0,20	./.	1/1:8,0:8:10.24:80,10,0	0/1:9,0:8:4.20:51,0,4	0/1:11,0:10:6.93:7,0,22	0/1:5,0:4:7.02:10,0,7	0/1:26,1:24:69.98:131,0,70	0/1:26,1:24:18.73:157,0,19	0/1:10,0:10:18.19:50,0,18	0/1:8,0:8:12.92:13,0,60	0/1:9,0:9:23.15:23,0,39	1/1:4,0:4:6.01:57,6,0	0/0:7,0:6:1.86:0,2,19	0/1:5,1:6:17.40:17,0,28	0/0:12,0:12:30.67:0,31,139	0/1:12,0:11:38.49:57,0,38	0/1:20,1:22:10.72:155,0,11	1/1:5,0:4:3.01:31,3,0
chr10	77429925	.	G	GA	5043.55	PASS	AB=0.558;AC=32;AF=0.571;AN=56;BaseQRankSum=-10.950;DP=446;FS=2.014;HRun=11;HaplotypeScore=45.0068;InbreedingCoeff=0.7576;MQ=60.15;MQ0=4;MQRankSum=0.706;QD=17.82;ReadPosRankSum=-1.202;VQSLOD=5.1511;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:53.77:0,54,418	1/1:3,2:4:5.58:60,6,0	0/0:16,0:7:2.81:0,3,66	0/0:14,0:5:2.94:0,3,23	0/0:8,0:26:35.57:0,36,117	1/1:2,16:18:24.86:432,25,0	1/1:3,8:11:16.47:180,16,0	1/1:13,6:19:30.69:278,31,0	0/0:3,0:14:22.41:0,22,65	1/1:9,12:22:18.68:356,19,0	1/1:3,12:15:27.52:274,28,0	0/0:1,0:12:18.33:0,18,53	0/0:3,0:11:12.22:0,12,35	1/1:3,6:7:15.03:152,15,0	1/1:1,9:10:15.03:152,15,0	1/1:2,5:8:14.86:136,15,0	1/1:9,33:41:48.59:857,49,0	1/1:5,24:26:33.87:525,34,0	1/1:5,15:20:44.76:424,45,0	1/1:5,12:17:12.68:295,13,0	0/1:2,10:12:22.42:159,0,22	0/0:0,0:4:8.15:0,8,24	0/0:0,0:6:12.22:0,12,35	0/0:8,0:20:26.37:0,26,76	0/0:3,0:14:18.33:0,18,53	1/1:2,18:22:53.41:480,53,0	1/1:2,8:11:14.86:136,15,0	0/1:3,9:12:10.01:147,0,10
chr10	77430690	.	T	TA	23016.78	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.717;DP=632;FS=2.015;HRun=0;HaplotypeScore=85.8310;InbreedingCoeff=0.9887;MQ=61.36;MQ0=0;MQRankSum=1.283;QD=42.23;ReadPosRankSum=3.378;VQSLOD=5.5193;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,1:48:99:0,141,1972	1/1:1,13:14:36.59:576,37,0	0/0:15,0:14:42.14:0,42,578	0/0:22,1:21:12.27:0,12,735	1/1:0,11:11:27.09:431,27,0	1/1:0,16:16:42.14:671,42,0	1/1:0,22:21:42.14:670,42,0	1/1:2,23:17:42.06:595,42,0	1/1:0,22:22:66.23:1055,66,0	1/1:0,20:20:57.19:910,57,0	1/1:0,13:13:33.11:527,33,0	1/1:1,27:28:84.29:1333,84,0	1/1:0,24:24:69.20:1076,69,0	1/1:0,20:20:54.18:863,54,0	1/1:2,27:28:75.26:1199,75,0	1/1:1,22:23:63.21:1007,63,0	1/1:0,31:31:90.31:1439,90,0	1/1:0,23:23:63.21:1007,63,0	1/1:1,10:11:30.10:477,30,0	1/1:0,26:26:78.27:1247,78,0	1/1:3,37:40:99:1631,102,0	1/1:0,21:21:54.18:863,54,0	1/1:0,13:13:33.11:527,33,0	1/1:0,30:30:81.28:1295,81,0	1/1:0,16:16:45.15:719,45,0	1/1:0,23:23:66.23:1055,66,0	1/1:2,25:27:66.09:1027,66,0	1/1:0,17:17:51.17:815,51,0
chr10	77431200	.	CA	C	7331.18	PASS	AB=0.833;AC=39;AF=0.886;AN=44;BaseQRankSum=5.057;DP=426;FS=8.938;HRun=10;HaplotypeScore=51.8804;InbreedingCoeff=0.7284;MQ=54.96;MQ0=15;MQRankSum=-0.056;QD=19.87;ReadPosRankSum=0.444;VQSLOD=5.4024;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,1:47:99:0,100,1253	1/1:3,3:6:5.99:52,6,0	0/1:4,1:5:13.15:13,0,81	0/0:5,0:5:15.03:0,15,155	1/1:2,22:23:56.95:493,57,0	1/1:1,19:20:56.98:495,57,0	1/1:1,24:25:71.98:625,72,0	1/1:5,23:24:62.96:542,63,0	./.	1/1:1,20:21:56.99:495,57,0	1/1:2,11:12:26.97:234,27,0	./.	./.	1/1:3,11:14:32.99:286,33,0	1/1:3,7:10:20.99:182,21,0	1/1:2,14:16:29.48:349,29,0	1/1:7,26:31:77.98:677,78,0	1/1:8,23:30:66.91:575,67,0	1/1:5,11:11:29.98:256,30,0	1/1:1,15:15:44.95:383,45,0	1/1:1,7:8:21:182,21,0	./.	./.	./.	1/1:5,18:23:34.26:423,34,0	1/1:4,19:21:53.98:469,54,0	1/1:4,23:27:56.98:495,57,0	1/1:3,7:9:12:104,12,0
chr10	77431854	.	A	AGTTAAT	31989.02	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-3.604;DP=450;FS=10.556;HRun=0;HaplotypeScore=76.5273;InbreedingCoeff=0.9007;MQ=45.10;MQ0=1;MQRankSum=-9.617;QD=79.57;ReadPosRankSum=0.577;VQSLOD=5.6302;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.18:0,57,1298	1/1:2,3:5:15.05:484,15,0	0/0:19,0:15:39.13:0,39,925	0/0:9,0:9:24.08:0,24,511	1/1:8,30:36:99:3286,99,0	1/1:4,13:19:39.13:1367,39,0	1/1:1,9:10:24.08:876,24,0	1/1:13,6:23:60.20:1982,60,0	1/1:3,7:13:27.09:986,27,0	1/1:3,18:23:66.23:2306,66,0	1/1:3,15:20:51.18:1746,51,0	1/1:6,4:11:30.10:953,30,0	1/1:1,7:9:21.07:762,21,0	1/1:5,9:15:27.09:986,27,0	1/1:2,11:14:27.09:985,27,0	1/1:3,11:14:30.10:1078,30,0	1/1:2,13:19:36.12:1198,36,0	1/1:6,4:14:27.09:976,27,0	1/1:4,6:10:30.10:951,30,0	1/1:3,23:28:75.26:2573,75,0	1/1:1,2:4:3.01:109,3,0	1/1:5,13:20:45.15:1530,45,0	1/1:6,16:24:54.19:1740,54,0	1/1:0,5:8:12.04:438,12,0	1/1:3,14:18:48.16:1695,48,0	1/1:3,17:20:57.20:1997,57,0	1/1:2,5:9:18.06:658,18,0	1/1:0,4:7:9.03:329,9,0
chr10	77431948	.	CT	C	1463.54	PASS	AB=0.952;AC=14;AF=0.250;AN=56;BaseQRankSum=6.380;DP=538;FS=2.663;HRun=13;HaplotypeScore=64.5599;InbreedingCoeff=0.8017;MQ=66.25;MQ0=5;MQRankSum=1.344;QD=10.09;ReadPosRankSum=1.108;VQSLOD=3.1967;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,3:27:26.06:0,26,391	0/0:6,0:6:14.93:0,15,128	0/1:17,0:13:3.62:4,0,77	0/0:9,0:5:8.93:0,9,67	0/0:5,0:26:25.60:0,26,219	0/0:22,0:22:48.02:0,48,451	0/0:9,0:14:29.54:0,30,239	0/0:29,0:30:38.04:0,38,417	1/1:6,8:14:23.83:175,24,0	0/0:26,1:28:28.57:0,29,380	0/0:15,2:17:7.33:0,7,286	1/1:4,15:18:38.45:284,38,0	1/1:3,15:19:40.77:290,41,0	0/0:20,0:18:20.56:0,21,223	0/0:24,2:26:46.65:0,47,559	0/0:21,3:24:32.11:0,32,452	0/0:28,0:27:32.15:0,32,455	0/0:18,0:15:26.97:0,27,246	0/1:16,2:18:14.77:15,0,187	0/0:27,1:29:23:0,23,372	0/0:8,0:9:14.14:0,14,117	1/1:5,17:22:50.57:370,51,0	1/1:8,12:21:49.43:344,49,0	1/1:7,7:14:23.78:172,24,0	0/0:2,0:12:18.61:0,19,114	0/0:18,0:19:35.25:0,35,307	0/0:19,0:19:20.36:0,20,350	0/0:9,0:9:15.02:0,15,146
chr10	77433427	.	T	TAATA	20068.34	PASS	AB=0.663;AC=42;AF=0.778;AN=54;BaseQRankSum=-8.250;DP=558;FS=15.707;HRun=0;HaplotypeScore=76.8704;InbreedingCoeff=0.3368;MQ=47.73;MQ0=16;MQRankSum=-0.896;QD=39.82;ReadPosRankSum=2.785;VQSLOD=3.7334;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:37.34:0,37,819	1/1:4,4:7:9.03:195,9,0	0/0:18,0:12:36.11:0,36,567	0/0:7,0:4:12:0,12,175	1/1:8,20:26:51.17:1195,51,0	1/1:5,16:21:42.14:1066,42,0	1/1:8,5:13:21.07:433,21,0	1/1:9,8:14:24.08:499,24,0	1/1:10,7:17:18.06:423,18,0	0/1:12,13:25:11.39:872,0,11	1/1:1,16:17:48.12:1114,48,0	0/1:11,16:26:49.99:1094,0,50	0/1:8,11:17:22.03:622,0,22	0/1:9,9:17:71.05:585,0,71	1/1:9,13:22:27.09:586,27,0	1/1:8,17:25:18.38:1006,18,0	1/1:9,21:31:37.73:1119,38,0	1/1:4,12:16:30.08:674,30,0	1/1:12,12:22:39.13:990,39,0	1/1:4,16:19:45.15:1043,45,0	1/1:6,8:12:15.05:314,15,0	0/1:10,3:12:99:177,0,138	0/1:8,16:23:92.59:982,0,93	./.	1/1:9,19:30:54.18:1238,54,0	1/1:7,25:32:78.27:1972,78,0	1/1:5,21:28:63.22:1565,63,0	1/1:1,4:6:12.04:305,12,0
chr10	77434304	.	GAAA	G	6643.21	PASS	AB=0.528;AC=45;AF=0.804;AN=56;BaseQRankSum=7.261;DP=617;FS=4.281;HRun=14;HaplotypeScore=98.9158;InbreedingCoeff=0.8065;MQ=55.42;MQ0=17;MQRankSum=-1.413;QD=16.48;ReadPosRankSum=6.492;VQSLOD=3.7319;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:49:99:0,122,1975	1/1:2,5:8:4.22:43,4,0	0/0:53,0:16:5.38:0,5,54	0/0:49,0:18:15.03:0,15,188	0/0:31,0:31:78.01:0,78,1202	1/1:2,15:17:27.05:316,27,0	0/1:2,16:19:4.78:300,0,5	1/1:2,17:19:46.33:504,46,0	1/1:3,0:20:26.45:160,26,0	1/1:4,7:11:21.04:245,21,0	1/1:5,19:24:42.01:468,42,0	1/1:2,0:21:43.67:260,44,0	1/1:3,0:17:32.34:196,32,0	1/1:5,5:9:5.99:70,6,0	1/1:4,22:26:39.05:456,39,0	1/1:4,15:19:28.61:393,29,0	1/1:8,16:27:42.11:502,42,0	1/1:3,10:13:9.94:294,10,0	1/1:7,10:16:30.01:341,30,0	1/1:5,14:19:36.04:421,36,0	1/1:3,13:17:26.70:292,27,0	1/1:6,0:15:9.38:91,9,0	1/1:5,1:20:20.43:140,20,0	1/1:3,0:14:26.43:159,26,0	0/0:27,0:27:56.57:0,57,998	1/1:4,13:20:36.04:406,36,0	1/1:5,14:21:33.22:413,33,0	1/1:1,6:7:15.03:175,15,0
chr10	77434390	.	G	GC	165.55	PASS	AC=12;AF=0.667;AN=18;BaseQRankSum=2.970;DP=91;FS=5.604;HRun=0;HaplotypeScore=31.0852;MQ=141.46;MQ0=1;MQRankSum=-2.480;QD=15.05;ReadPosRankSum=-3.783;VQSLOD=2.8049;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,1596	./.	0/0:19,0:18:47.34:0,47,696	0/0:16,0:16:21.38:0,21,452	1/1:0,2:2:3.01:48,3,0	./.	./.	1/1:1,0:1:3:25,3,0	./.	1/1:0,1:1:3.01:48,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:48,3,0	./.	./.	./.	./.	1/1:3,1:4:3.01:47,3,0	1/1:1,1:2:3.01:48,3,0	./.	./.
chr10	77434574	.	C	CT	4255.92	PASS	AB=0.633;AC=47;AF=0.839;AN=56;BaseQRankSum=-1.689;DP=432;FS=18.960;HRun=13;HaplotypeScore=52.1063;InbreedingCoeff=0.4490;MQ=56.62;MQ0=9;MQRankSum=0.569;QD=11.95;ReadPosRankSum=-0.108;VQSLOD=2.5732;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,1:43:89.72:0,90,751	1/1:2,4:6:14.99:146,15,0	0/0:18,0:7:11.55:0,12,80	0/0:13,0:11:7.99:0,8,47	1/1:24,1:24:23.12:179,23,0	1/1:4,9:13:17.90:167,18,0	1/1:3,13:16:26.96:267,27,0	1/1:6,16:22:16.16:396,16,0	1/1:10,1:11:10.18:175,10,0	1/1:7,10:16:10.05:321,10,0	1/1:6,9:14:17.95:162,18,0	1/1:4,7:11:11.96:101,12,0	1/1:5,0:4:8.92:71,9,0	1/1:2,6:8:6.02:66,6,0	0/1:3,6:9:11.01:110,0,11	1/1:1,9:10:3.01:33,3,0	1/1:6,16:21:21.06:232,21,0	1/1:7,16:22:24.06:264,24,0	0/1:6,6:11:5.70:127,0,6	1/1:3,13:16:4.14:255,4,0	1/1:5,16:20:9.02:98,9,0	1/1:1,7:8:11.16:88,11,0	1/1:9,1:9:12.48:116,12,0	1/1:13,8:21:32.98:341,33,0	1/1:8,0:8:11.99:111,12,0	1/1:5,11:16:26.06:254,26,0	1/1:4,12:15:6.49:68,6,0	0/1:6,7:13:10.98:110,0,11
chr10	77435268	.	T	TTA	16228.62	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-5.415;DP=504;FS=2.580;HRun=0;HaplotypeScore=65.4561;InbreedingCoeff=0.7748;MQ=71.93;MQ0=0;MQRankSum=-1.778;QD=35.59;ReadPosRankSum=-0.490;VQSLOD=6.2606;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:98.16:0,98,1180	1/1:0,8:8:24.03:396,24,0	0/1:12,0:12:7.44:7,0,216	0/0:13,0:12:23.17:0,23,287	1/1:0,0:22:52.68:525,53,0	1/1:0,10:11:27.09:467,27,0	1/1:0,11:11:27.08:453,27,0	1/1:2,25:30:87.11:1250,87,0	1/1:0,0:15:33.10:410,33,0	1/1:0,31:30:89.93:1445,90,0	1/1:1,26:27:71.99:1118,72,0	1/1:0,1:12:30.10:378,30,0	1/1:0,3:18:30.09:373,30,0	1/1:0,11:12:27.09:484,27,0	1/1:0,14:15:36.02:605,36,0	1/1:0,20:22:53.77:923,54,0	1/1:2,20:27:62.68:937,63,0	1/1:0,17:21:53.97:875,54,0	1/1:6,8:15:41.33:614,41,0	1/1:0,19:20:54.06:867,54,0	1/1:1,6:8:6.02:108,6,0	1/1:0,1:15:45.06:537,45,0	1/1:0,2:22:53.70:622,54,0	1/1:0,0:7:14.99:168,15,0	1/1:1,0:15:27:305,27,0	1/1:0,20:21:63.11:912,63,0	1/1:0,20:22:39.13:698,39,0	1/1:0,14:17:42.14:752,42,0
chr10	77437799	.	T	TA	9733.89	PASS	AB=0.710;AC=48;AF=0.857;AN=56;BaseQRankSum=-3.815;DP=633;FS=8.448;HRun=11;HaplotypeScore=71.7027;InbreedingCoeff=0.3705;MQ=70.61;MQ0=0;MQRankSum=0.308;QD=16.67;ReadPosRankSum=-0.112;VQSLOD=5.4083;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:35:94.62:0,95,719	1/1:2,3:5:9.02:91,9,0	0/1:8,0:11:3.16:6,0,3	0/0:14,0:13:5.04:0,5,56	1/1:5,23:28:36.81:533,37,0	0/1:8,17:25:7.37:296,0,7	1/1:4,20:24:31.45:468,31,0	1/1:10,27:37:38.23:663,38,0	1/1:4,2:25:48.61:269,49,0	0/1:11,21:31:41.06:512,0,41	1/1:3,16:19:39:382,39,0	1/1:2,0:24:34.23:179,34,0	1/1:1,1:14:34.36:191,34,0	1/1:7,20:27:33.79:511,34,0	1/1:6,24:30:21.52:565,22,0	1/1:7,14:22:1.46:364,1,0	1/1:8,19:27:7.64:441,8,0	1/1:1,15:16:42.08:426,42,0	1/1:7,17:26:36.99:505,37,0	1/1:5,16:22:27.66:436,28,0	1/1:2,18:20:27.87:464,28,0	1/1:2,3:17:34.83:229,35,0	1/1:2,1:18:16.90:178,17,0	1/1:2,2:14:25.93:162,26,0	0/1:7,9:16:19.45:176,0,19	1/1:11,26:37:11.93:656,12,0	1/1:7,31:37:64.17:817,64,0	1/1:1,9:10:21.04:213,21,0
chr10	77438054	.	TAGAGCACTTGCC	T	31981.62	PASS	AB=0.548;AC=37;AF=0.712;AN=52;BaseQRankSum=10.102;DP=442;FS=10.394;HRun=0;HaplotypeScore=178.6150;InbreedingCoeff=-0.2315;MQ=34.37;MQ0=8;MQRankSum=-7.953;QD=80.97;ReadPosRankSum=-2.969;VQSLOD=3.5248;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:40:96.33:0,96,5517	1/1:1,2:2:6.02:238,6,0	./.	./.	0/1:2,18:19:99:1449,0,145	1/1:2,16:17:39.13:1544,39,0	0/1:4,10:9:99:460,0,128	1/1:2,8:10:27.09:916,27,0	0/1:5,10:13:99:1218,0,151	0/1:2,18:18:99:1765,0,136	0/1:1,9:10:99:742,0,163	0/1:1,22:21:99:2193,0,130	1/1:0,10:10:27.09:1069,27,0	1/1:2,15:17:42.14:1660,42,0	0/1:2,11:13:99:1266,0,341	0/1:1,19:20:99:1965,0,136	0/1:5,21:23:99:1381,0,339	1/1:5,10:10:15.05:594,15,0	1/1:1,6:6:15.05:594,15,0	1/1:1,19:19:54.14:2037,54,0	0/1:3,12:12:99:1037,0,161	0/1:4,14:17:99:1402,0,148	1/1:0,20:19:51.18:1967,51,0	1/1:0,13:13:27.09:1069,27,0	0/1:6,14:18:99:1260,0,715	0/1:3,18:20:99:1665,0,328	1/1:2,18:19:47.85:1899,48,0	1/1:0,5:5:15.05:594,15,0
chr10	77438104	.	G	GAA	3558.30	PASS	AB=0.928;AC=48;AF=0.857;AN=56;BaseQRankSum=1.781;DP=491;FS=10.609;HRun=15;HaplotypeScore=177.2269;InbreedingCoeff=0.3451;MQ=31.72;MQ0=28;MQRankSum=-1.291;QD=7.87;ReadPosRankSum=-2.002;VQSLOD=0.0938;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:35:19.66:0,20,251	1/1:2,1:3:2.97:37,3,0	0/1:5,0:1:0:0,0,0	0/0:1,0:1:2.99:0,3,23	1/1:23,2:27:22.40:277,22,0	1/1:23,1:23:15.62:190,16,0	1/1:14,1:7:5.81:51,6,0	1/1:20,2:21:28.04:226,28,0	1/1:22,0:21:34.60:226,35,0	1/1:20,0:19:9.69:50,10,0	1/1:15,0:15:15.31:126,15,0	1/1:14,1:13:9.65:61,10,0	1/1:14,0:13:24.66:149,25,0	1/1:17,0:17:4.81:118,5,0	1/1:17,1:18:29.25:228,29,0	1/1:19,2:20:19.24:187,19,0	0/1:17,2:19:14.23:192,0,14	0/1:16,0:13:10.26:39,0,10	1/1:18,0:14:22.04:153,22,0	1/1:17,0:19:30.40:194,30,0	0/1:14,0:9:16.47:26,0,16	1/1:15,0:14:15.93:109,16,0	1/1:20,1:21:29.85:214,30,0	1/1:7,0:8:7.22:32,7,0	1/1:18,2:19:21.34:199,21,0	1/1:17,2:16:15.98:142,16,0	1/1:16,1:17:30.15:213,30,0	1/1:7,2:7:11.72:117,12,0
chr10	77438117	.	AAAG	A	1006.14	PASS	AB=0.991;AC=26;AF=0.464;AN=56;BaseQRankSum=2.076;DP=517;FS=3.712;HRun=0;HaplotypeScore=138.8102;InbreedingCoeff=-0.6563;MQ=39.51;MQ0=24;MQRankSum=-2.941;QD=2.21;ReadPosRankSum=2.162;VQSLOD=2.5863;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:43:54.03:0,54,1052	0/0:7,0:7:6.37:0,6,39	0/1:11,0:2:0.52:1,0,6	0/0:9,0:6:3.35:0,3,51	0/1:27,0:25:58.74:70,0,59	0/1:21,0:19:26.37:73,0,26	0/1:15,0:10:9.91:10,0,13	0/1:26,0:24:62.15:62,0,82	0/1:26,0:25:60.64:61,0,70	0/1:15,0:14:24.29:24,0,27	0/1:18,0:17:40.29:40,0,60	0/1:13,0:10:4.38:24,0,4	0/1:18,0:17:7.40:7,0,66	0/1:11,1:12:36.52:37,0,56	0/1:21,1:21:32.55:128,0,33	0/1:14,1:14:44.17:44,0,58	0/1:21,0:20:64.01:67,0,64	0/1:20,0:14:31.85:32,0,104	0/1:23,0:21:31.29:31,0,126	0/1:20,0:20:49.75:50,0,92	0/1:14,0:11:4.80:5,0,73	0/1:12,0:11:25.34:39,0,25	0/1:26,0:26:64.57:71,0,65	0/1:11,0:11:7.44:49,0,7	0/1:21,1:19:54.51:55,0,64	0/1:20,0:18:46.86:47,0,56	0/1:20,0:18:44.12:52,0,44	1/1:7,1:6:10.59:78,11,0
chr10	77438118	.	AAG	A	2076.62	PASS	AB=0.946;AC=27;AF=0.482;AN=56;BaseQRankSum=1.952;DP=527;FS=1.719;HRun=0;HaplotypeScore=129.0208;InbreedingCoeff=-0.5934;MQ=39.70;MQ0=24;MQRankSum=-5.155;QD=4.46;ReadPosRankSum=5.830;VQSLOD=2.4909;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:43:54.72:0,55,838	0/0:6,1:7:14.98:0,15,54	0/1:11,0:2:0.58:1,0,6	0/0:9,0:6:3.35:0,3,45	0/1:25,1:24:43.97:71,0,44	1/1:20,2:20:12.61:209,13,0	0/1:15,0:10:17.18:33,0,17	0/1:28,1:27:64.60:65,0,98	0/1:25,2:26:46.82:204,0,47	0/1:14,1:14:14.89:100,0,15	0/1:16,2:17:44.07:103,0,44	1/1:12,1:10:9.57:81,10,0	0/1:18,1:18:46.31:87,0,46	0/1:11,1:12:8.29:96,0,8	0/1:21,1:21:9.18:143,0,9	0/1:14,1:14:49.31:78,0,49	0/1:21,2:20:45.89:71,0,46	0/1:20,0:14:44.44:44,0,69	0/1:22,1:21:59:59,0,105	0/1:16,4:20:63.39:132,0,63	0/1:13,1:11:16.13:16,0,59	0/1:12,0:11:23.66:80,0,24	0/1:22,4:26:38.58:152,0,39	0/1:10,1:11:3.23:120,0,3	0/1:22,0:19:22:22,0,70	0/1:18,2:18:53.35:68,0,53	0/1:20,1:19:43.13:154,0,43	0/1:10,0:8:16.11:43,0,16
chr10	77438119	.	AG	A	2189.62	PASS	AB=0.959;AC=26;AF=0.464;AN=56;BaseQRankSum=0.718;DP=512;FS=4.637;HRun=1;HaplotypeScore=113.7744;InbreedingCoeff=-0.5786;MQ=41.75;MQ0=24;MQRankSum=-3.532;QD=5.01;ReadPosRankSum=6.144;VQSLOD=0.7068;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:44:44.27:0,44,620	0/0:7,0:7:12.26:0,12,47	0/0:11,1:3:2.11:0,2,18	0/0:10,0:7:6.36:0,6,67	0/1:24,1:23:51.90:64,0,52	1/1:19,1:18:22.78:228,23,0	0/1:13,1:9:15.96:50,0,16	0/1:29,0:27:79.99:80,0,106	0/1:26,1:26:42.29:187,0,42	0/1:12,3:14:15.79:123,0,16	0/1:16,0:15:35.22:75,0,35	1/1:12,0:9:9.15:72,9,0	0/1:19,0:18:57.77:59,0,58	0/1:11,2:13:23.05:123,0,23	0/1:19,0:18:2.26:151,0,2	0/1:16,0:15:32.62:96,0,33	0/1:22,1:20:58.32:100,0,58	0/1:20,0:14:53.25:70,0,53	0/1:22,1:21:80.02:80,0,105	0/1:18,1:19:57.92:103,0,58	0/1:13,1:11:37.55:38,0,49	0/1:10,2:11:19.82:114,0,20	0/1:22,2:24:38.70:187,0,39	0/1:11,0:11:7.86:91,0,8	0/1:18,1:16:21.73:22,0,62	0/1:18,0:16:48.30:48,0,48	0/1:20,0:18:35.97:156,0,36	0/1:9,0:7:11.53:30,0,12
chr10	77438125	.	GAAA	G	5912.83	PASS	AB=0.848;AC=39;AF=0.696;AN=56;BaseQRankSum=-4.267;DP=511;FS=48.459;HRun=12;HaplotypeScore=115.0369;InbreedingCoeff=0.0037;MQ=42.94;MQ0=24;MQRankSum=2.129;QD=13.47;ReadPosRankSum=3.700;VQSLOD=-0.2913;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:47:65.47:0,65,1270	1/1:2,5:7:15.44:190,15,0	0/0:11,0:3:8.96:0,9,71	0/0:9,0:7:10.52:0,11,153	1/1:17,7:22:15.37:333,15,0	0/1:16,1:15:60.65:190,0,61	1/1:8,4:8:6.73:181,7,0	1/1:13,17:28:28.54:534,29,0	1/1:19,8:27:1.67:334,2,0	1/1:12,3:14:20.68:220,21,0	1/1:14,3:16:22.17:244,22,0	0/1:12,1:10:26.96:52,0,27	0/1:16,3:18:99:151,0,111	0/1:11,1:12:36.46:36,0,51	0/1:16,4:19:28.57:308,0,29	0/1:9,5:13:4.17:214,0,4	1/1:17,6:21:6.20:363,6,0	0/1:17,3:15:1.77:181,0,2	1/1:16,8:22:10.57:375,11,0	0/1:14,4:19:44.29:129,0,44	0/1:11,3:11:23.45:166,0,23	1/1:10,3:12:5.46:231,5,0	0/1:18,6:24:32.65:328,0,33	1/1:7,4:11:20.92:207,21,0	1/1:12,6:16:13.96:287,14,0	1/1:10,8:16:28.61:349,29,0	0/1:13,4:17:11.96:240,0,12	1/1:6,4:8:1.76:68,2,0
chr10	77438128	.	A	AAG	4782.82	PASS	AB=0.927;AC=32;AF=0.571;AN=56;BaseQRankSum=-1.468;DP=510;FS=24.664;HRun=0;HaplotypeScore=115.5723;InbreedingCoeff=-0.3129;MQ=43.52;MQ0=24;MQRankSum=5.028;QD=10.94;ReadPosRankSum=6.339;VQSLOD=2.3906;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:47:88.51:0,89,1072	1/1:6,1:7:7.98:79,8,0	0/0:14,0:3:8.92:0,9,64	0/0:10,0:7:14.83:0,15,148	0/1:21,3:22:7.12:212,0,7	0/1:15,1:15:26.79:285,0,27	1/1:10,2:8:20.32:158,20,0	0/1:31,0:29:6.25:373,0,6	0/1:25,3:27:14.15:390,0,14	1/1:12,2:13:5.61:228,6,0	0/1:14,3:16:16.54:178,0,17	0/1:10,2:9:3.28:57,0,3	0/1:19,0:18:63.05:63,0,105	0/1:9,2:11:50.21:136,0,50	0/1:19,2:20:4.19:301,0,4	0/1:14,0:13:5.81:132,0,6	0/1:22,0:20:21.41:207,0,21	0/1:19,2:16:55.73:138,0,56	0/1:25,1:24:22.12:211,0,22	0/1:16,2:18:69.96:146,0,70	0/1:14,0:11:22.21:106,0,22	1/1:12,1:12:17.09:210,17,0	0/1:20,3:23:5.92:253,0,6	1/1:7,4:11:1.06:223,1,0	1/1:15,1:14:8.10:110,8,0	1/1:17,1:16:3.88:184,4,0	0/1:15,4:19:21.48:342,0,21	0/1:10,0:8:21.36:59,0,21
chr10	77438135	.	AAAG	A	1814.95	PASS	AB=0.990;AC=28;AF=0.500;AN=56;BaseQRankSum=7.361;DP=485;FS=2.732;HRun=0;HaplotypeScore=111.0243;InbreedingCoeff=-0.5250;MQ=48.82;MQ0=15;MQRankSum=-4.825;QD=4.51;ReadPosRankSum=8.949;VQSLOD=1.1982;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:76.96:0,77,1270	0/1:9,0:9:50.23:75,0,50	0/0:14,0:4:8.95:0,9,73	0/0:11,0:8:17.64:0,18,240	0/1:23,0:21:39.18:104,0,39	0/1:14,1:14:8.28:56,0,8	0/1:12,0:8:9.70:61,0,10	0/1:28,0:27:80.02:137,0,80	1/1:23,0:23:8:92,8,0	0/1:12,0:11:35.86:36,0,53	1/1:15,0:14:0.67:62,1,0	0/1:12,0:9:15.41:38,0,15	0/1:19,0:18:58.61:59,0,75	0/0:10,0:10:4.04:0,4,68	0/1:19,0:19:12.75:158,0,13	0/1:14,0:14:24.84:66,0,25	0/1:21,1:20:44.17:201,0,44	0/1:18,1:16:59.69:77,0,60	0/1:25,0:24:69.06:106,0,69	0/1:17,0:17:28.19:28,0,42	0/1:16,0:13:54.99:66,0,55	0/1:13,0:13:48.60:66,0,49	0/1:19,0:19:21.62:100,0,22	1/1:12,0:12:1:50,1,0	0/1:16,0:14:20.95:108,0,21	0/1:17,0:17:92.67:93,0,110	0/1:17,1:18:28.29:108,0,28	1/1:7,0:5:5.60:25,6,0
chr10	77439274	.	G	GTCTCTCTCTCTCTC	8527.11	PASS	AB=0.979;AC=46;AF=0.885;AN=52;BaseQRankSum=2.202;DP=628;FS=22.349;HRun=0;HaplotypeScore=229.9580;InbreedingCoeff=0.4699;MQ=72.04;MQ0=11;MQRankSum=-4.583;QD=17.84;ReadPosRankSum=-0.763;VQSLOD=2.2607;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:40:78.21:0,78,2334	1/1:16,0:14:9.92:400,10,0	0/1:45,0:25:4.12:4,0,545	0/0:68,0:39:12.72:0,13,245	./.	1/1:21,0:22:3.48:173,3,0	1/1:18,0:17:3.01:100,3,0	1/1:28,0:27:18.06:595,18,0	1/1:19,0:16:12.98:411,13,0	1/1:17,0:14:22.31:813,22,0	1/1:14,0:13:6.02:100,6,0	./.	1/1:14,0:17:10.19:291,10,0	1/1:17,7:22:5.93:126,6,0	1/1:21,0:19:9.03:279,9,0	1/1:27,0:23:27.09:891,27,0	1/1:14,0:15:12.51:500,13,0	1/1:9,0:9:17.98:586,18,0	1/1:5,0:8:9.01:348,9,0	1/1:24,0:25:10.23:263,10,0	1/1:24,0:24:4.23:94,4,0	0/1:22,0:18:0.01:1,0,0	1/1:8,0:8:3.01:95,3,0	1/1:14,0:13:5.70:63,6,0	1/1:21,0:21:6.21:152,6,0	1/1:16,0:19:33.11:1340,33,0	1/1:13,0:18:9.50:454,10,0	1/1:18,0:17:13.29:448,13,0
chr10	77439299	.	T	TCA	880.15	PASS	AB=0.938;AC=30;AF=0.577;AN=52;BaseQRankSum=-1.368;DP=544;FS=11.360;HRun=0;HaplotypeScore=160.0302;InbreedingCoeff=0.3291;MQ=45.07;MQ0=9;MQRankSum=-2.340;QD=2.79;ReadPosRankSum=-1.199;VQSLOD=1.8961;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:60.05:0,60,435	1/1:12,0:10:2:14,2,0	./.	./.	1/1:14,0:16:8.23:36,8,0	0/1:18,0:16:7.94:18,0,8	1/1:10,0:9:3:25,3,0	0/1:22,0:20:25.96:26,0,65	0/0:17,0:14:9.36:0,9,48	1/1:18,0:14:3:25,3,0	1/1:14,0:13:5.71:36,6,0	0/0:23,0:23:17.53:0,18,109	0/0:19,0:19:17.68:0,18,114	1/1:20,0:18:8.06:125,8,0	0/1:11,16:25:13.80:39,0,14	0/1:26,0:22:0.79:106,0,1	1/1:14,0:14:6.83:66,7,0	0/1:12,0:12:23.25:135,0,23	1/1:7,0:5:2.04:6,2,0	1/1:29,0:27:11.76:148,12,0	0/0:16,2:20:2.30:0,2,8	0/0:23,0:17:7.61:0,8,51	0/0:10,0:10:20.47:0,20,122	0/0:16,0:15:12.87:0,13,70	1/1:17,0:18:7.78:43,8,0	1/1:19,0:17:9.18:58,9,0	0/1:17,0:17:67.21:87,0,67	1/1:13,0:12:4.37:56,4,0
chr10	77439503	.	GAAACA	G	18878.28	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=7.230;DP=627;FS=4.659;HRun=0;HaplotypeScore=130.8029;InbreedingCoeff=0.9937;MQ=62.01;MQ0=6;MQRankSum=-3.603;QD=36.17;ReadPosRankSum=5.429;VQSLOD=4.3876;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,102,2819	1/1:1,16:17:44.75:807,45,0	0/0:36,0:21:43.26:0,43,1094	0/0:26,0:24:37.35:0,37,901	1/1:6,15:21:33.02:551,33,0	1/1:3,20:23:48.16:906,48,0	1/1:5,14:19:21.07:405,21,0	1/1:8,15:23:45.15:855,45,0	1/1:5,16:21:42.14:810,42,0	1/1:5,12:17:36.10:645,36,0	1/1:1,11:12:30.10:513,30,0	1/1:2,17:19:39.13:753,39,0	1/1:6,15:21:45.15:868,45,0	1/1:0,22:22:54.18:1022,54,0	1/1:3,24:27:57.20:1100,57,0	1/1:4,24:28:66.23:1274,66,0	1/1:6,25:31:51.17:983,51,0	1/1:7,9:16:24.08:463,24,0	1/1:4,14:18:39.10:661,39,0	1/1:2,23:25:48.11:887,48,0	1/1:4,24:28:45.02:828,45,0	1/1:1,10:11:24.08:417,24,0	1/1:2,16:19:33.03:552,33,0	1/1:9,36:45:79.36:1518,79,0	1/1:1,11:12:21.07:405,21,0	1/1:6,13:18:39.13:732,39,0	1/1:5,10:15:24.55:458,25,0	1/1:2,11:13:24.08:463,24,0
chr10	77440639	.	C	CT	196.85	PASS	AB=0.867;AC=5;AF=0.089;AN=56;BaseQRankSum=-2.614;DP=412;FS=2.793;HRun=12;HaplotypeScore=73.3877;InbreedingCoeff=0.4189;MQ=66.55;MQ0=6;MQRankSum=-1.407;QD=4.02;ReadPosRankSum=-0.246;VQSLOD=0.9681;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:47.57:0,48,347	0/0:8,0:7:19.28:0,19,95	0/0:23,0:14:20.91:0,21,119	0/1:14,0:5:2.47:2,0,20	0/1:5,10:14:16.31:151,0,16	0/0:12,0:14:25.96:0,26,91	0/0:2,0:2:2.04:0,2,6	0/0:31,0:29:47.26:0,47,179	0/0:16,0:16:23.51:0,24,157	0/0:9,0:10:11.52:0,12,44	0/0:13,0:12:24.53:0,25,104	0/0:18,0:18:18.64:0,19,107	0/0:6,0:6:2.84:0,3,20	0/0:10,0:10:20.65:0,21,82	0/0:3,0:16:16.29:0,16,47	0/0:11,0:10:9.70:0,10,36	0/0:16,0:16:21.87:0,22,109	0/0:18,0:18:31.43:0,31,122	0/0:23,0:25:29.02:0,29,112	0/0:12,0:11:16.24:0,16,84	0/0:9,0:9:16.61:0,17,71	0/1:5,0:5:0:0,0,0	0/0:20,0:19:28.23:0,28,189	0/0:11,0:11:14.34:0,14,91	1/1:1,14:15:15.02:146,15,0	0/0:19,0:16:19.07:0,19,74	0/0:19,0:19:13.32:0,13,110	0/0:5,0:3:8.03:0,8,34
chr10	77440653	.	A	AT	4050.32	PASS	AB=0.848;AC=42;AF=0.778;AN=54;BaseQRankSum=-1.097;DP=397;FS=0.000;HRun=10;HaplotypeScore=46.2936;InbreedingCoeff=0.7012;MQ=56.55;MQ0=35;MQRankSum=0.342;QD=13.50;ReadPosRankSum=-0.720;VQSLOD=2.8430;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:27:46.14:0,46,371	1/1:8,0:7:20.88:164,21,0	0/0:16,1:10:2.30:0,2,23	0/1:12,0:4:0:0,0,0	0/0:13,0:11:17.56:0,18,87	1/1:15,3:15:39.03:370,39,0	1/1:1,1:2:3.01:31,3,0	1/1:22,1:19:35.90:311,36,0	1/1:4,12:14:24.06:255,24,0	1/1:8,0:6:5.97:48,6,0	1/1:13,0:11:17.69:130,18,0	1/1:7,10:16:18.72:346,19,0	1/1:0,5:6:11.96:106,12,0	1/1:8,0:8:20.93:179,21,0	0/0:16,0:15:29.94:0,30,241	1/1:9,0:8:15.02:145,15,0	1/1:15,2:14:29.74:244,30,0	1/1:20,0:17:26.87:230,27,0	1/1:20,1:18:5.32:219,5,0	1/1:11,4:12:16.23:173,16,0	1/1:7,0:7:17.81:151,18,0	./.	0/1:9,7:13:15.57:55,0,16	1/1:3,2:7:9.02:92,9,0	0/0:16,0:13:14.07:0,14,75	1/1:17,0:12:26.89:246,27,0	1/1:23,4:22:50.72:479,51,0	1/1:11,1:4:8.96:75,9,0
chr10	77442109	.	C	CCT	161.34	PASS	AB=0.750;AC=12;AF=0.750;AN=16;BaseQRankSum=1.422;DP=33;FS=13.222;HRun=0;HaplotypeScore=15.2076;MQ=101.20;MQ0=0;MQRankSum=-1.683;QD=8.96;ReadPosRankSum=1.203;VQSLOD=1.3129;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:2,0:1:0.81:1,0,41	0/0:3,0:3:5.95:0,6,61	./.	./.	./.	./.	./.	1/1:0,2:1:3.01:58,3,0	1/1:2,0:1:2.37:8,2,0	./.	./.	./.	./.	./.	./.	./.	./.	0/1:0,2:2:0:0,0,0	./.	1/1:0,5:5:3.01:57,3,0	./.	./.	1/1:1,1:2:3.01:58,3,0	./.	./.	1/1:0,1:1:3.01:58,3,0
chr10	77445005	.	CT	C	3439.14	PASS	AB=0.600;AC=43;AF=0.796;AN=54;BaseQRankSum=-2.267;DP=335;FS=34.530;HRun=2;HaplotypeScore=51.5009;InbreedingCoeff=0.8289;MQ=74.58;MQ0=5;MQRankSum=0.056;QD=14.95;ReadPosRankSum=3.588;VQSLOD=1.4436;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:41.98:0,42,418	1/1:3,4:7:7.92:41,8,0	0/0:40,0:19:38.94:0,39,338	0/0:23,0:12:4.62:0,5,106	0/0:14,0:14:26.71:0,27,272	1/1:13,1:14:32.01:264,32,0	0/1:3,6:9:0:0,0,0	1/1:15,2:17:34.51:289,35,0	1/1:5,1:6:9:86,9,0	1/1:7,1:8:18.89:172,19,0	1/1:6,1:7:5.29:33,5,0	1/1:11,0:11:26.76:207,27,0	1/1:9,1:10:23.92:192,24,0	./.	1/1:8,0:8:14.97:122,15,0	1/1:13,0:13:36.24:276,36,0	1/1:17,2:19:43.67:351,44,0	1/1:10,1:11:11.13:99,11,0	1/1:12,0:12:14.50:115,15,0	1/1:3,10:13:26.44:185,26,0	1/1:7,0:7:14.94:121,15,0	1/1:9,0:9:21.82:164,22,0	1/1:5,2:6:8.04:57,8,0	1/1:8,1:9:20.76:150,21,0	0/0:5,0:5:14.45:0,14,114	1/1:15,1:16:36.31:305,36,0	1/1:6,0:6:9.37:58,9,0	1/1:11,0:11:19.99:152,20,0
chr10	77445082	.	CCA	C	623.59	PASS	AB=0.857;AC=37;AF=0.661;AN=56;BaseQRankSum=4.189;DP=327;FS=1.736;HRun=0;HaplotypeScore=71.4085;InbreedingCoeff=0.3883;MQ=58.58;MQ0=14;MQRankSum=-1.821;QD=3.06;ReadPosRankSum=4.896;VQSLOD=1.5345;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:36.24:0,36,483	1/1:1,0:2:2.80:13,3,0	0/0:24,0:5:14.67:0,15,99	0/0:24,0:8:4.20:0,4,50	0/0:14,0:14:5.99:0,6,19	1/1:5,1:7:0.65:26,1,0	1/1:2,1:3:2.96:21,3,0	0/1:8,1:8:0.10:0,0,0	0/1:3,2:5:1.38:16,0,1	1/1:10,2:11:8.77:61,9,0	1/1:4,4:11:10.67:57,11,0	0/1:5,1:6:0.03:0,0,0	1/1:1,2:4:8.75:55,9,0	0/1:7,0:6:0.02:0,0,0	1/1:8,0:7:2.85:20,3,0	1/1:5,3:9:11.69:76,12,0	1/1:16,3:18:1.36:63,1,0	1/1:11,2:14:8.17:54,8,0	1/1:10,2:8:5.85:37,6,0	0/0:14,2:13:3.31:0,3,19	0/1:7,1:7:11.73:16,0,12	1/1:4,3:7:1.61:19,2,0	0/1:8,0:8:0.05:0,0,0	1/1:7,2:9:5.16:41,5,0	0/0:17,1:18:11:0,11,76	1/1:12,2:14:2.71:37,3,0	0/1:9,4:14:3.17:61,0,3	1/1:9,3:14:17.12:100,17,0
chr10	77445717	.	A	AACAT	21308.56	PASS	AB=0.716;AC=34;AF=0.607;AN=56;BaseQRankSum=-14.966;DP=787;FS=3.245;HRun=0;HaplotypeScore=114.1735;InbreedingCoeff=0.5456;MQ=65.89;MQ0=1;MQRankSum=-0.884;QD=37.32;ReadPosRankSum=0.286;VQSLOD=5.1536;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:41:72.14:0,72,1387	1/1:7,3:10:9.03:218,9,0	0/0:34,0:27:26.10:0,26,306	0/1:27,0:19:15.93:16,0,99	0/1:13,20:34:37.42:1251,0,37	1/1:6,16:22:33.11:801,33,0	1/1:10,14:24:30.10:728,30,0	1/1:19,12:34:57.13:1149,57,0	0/0:21,0:21:48.15:0,48,756	1/1:11,24:37:29.45:1742,29,0	1/1:6,23:30:14.40:1370,14,0	0/0:24,0:25:48.16:0,48,755	0/0:27,0:27:42.14:0,42,675	0/1:11,16:27:58.46:762,0,58	1/1:12,29:42:20.42:1546,20,0	1/1:5,19:25:54.19:1309,54,0	1/1:12,17:29:39.13:947,39,0	1/1:11,12:25:39.13:907,39,0	0/1:13,8:21:11.77:673,0,12	0/1:13,24:36:37.42:1225,0,37	1/1:13,25:40:78.27:1882,78,0	0/0:28,0:28:60.20:0,60,976	0/0:13,0:13:21.07:0,21,342	0/0:27,0:27:48.14:0,48,728	1/1:6,30:37:35.97:1849,36,0	1/1:9,14:25:48.15:1057,48,0	1/1:8,24:33:66.23:1601,66,0	0/1:7,4:11:33.76:276,0,34
chr10	77445899	.	CCCATTTGTCTTA	C	1250.95	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.927;DP=637;FS=1.078;HRun=0;HaplotypeScore=214.3084;InbreedingCoeff=0.9935;MQ=83.14;MQ0=0;MQRankSum=-5.137;QD=41.70;ReadPosRankSum=0.839;VQSLOD=3.2853;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,6475	0/0:14,0:14:39.13:0,39,2310	0/0:20,0:20:48.16:0,48,2150	0/0:17,0:17:48.16:0,48,1910	1/1:2,19:21:20.73:703,21,0	0/0:20,0:20:60.21:0,60,3230	0/0:23,0:23:63.22:0,63,3754	0/0:36,0:36:96.32:0,96,5052	0/0:24,0:24:69.24:0,69,4064	0/0:22,0:22:63.22:0,63,3788	0/0:22,0:22:60.21:0,60,3151	0/0:25,0:25:69.24:0,69,4085	0/0:17,0:17:51.17:0,51,2614	0/0:17,0:17:45.15:0,45,2540	0/0:29,0:29:84.29:0,84,4958	0/0:33,0:33:99:0,99,5945	0/0:27,0:27:78.27:0,78,4540	0/0:14,0:14:42.14:0,42,2565	0/0:18,0:18:54.19:0,54,3079	0/0:24,0:24:69.24:0,69,4035	0/0:31,0:31:87.29:0,87,4968	0/0:29,0:29:84.29:0,84,4918	0/0:17,0:17:48.15:0,48,2677	0/0:25,0:25:66.23:0,66,3763	1/1:1,8:9:18.06:666,18,0	0/0:23,0:23:60.21:0,60,3508	0/0:24,0:22:69.24:0,69,4174	0/0:17,0:17:51.18:0,51,3016
chr10	77451456	.	G	GA	1375.85	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.173;DP=572;FS=5.180;HRun=9;HaplotypeScore=54.0928;InbreedingCoeff=0.8906;MQ=73.58;MQ0=0;MQRankSum=0.751;QD=25.02;ReadPosRankSum=0.130;VQSLOD=4.3868;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:83.94:0,84,722	0/0:14,0:14:38.99:0,39,339	0/0:9,1:9:3.46:0,3,45	0/0:12,0:12:17.88:0,18,142	1/1:4,26:30:81.03:833,81,0	0/0:17,1:18:8.77:0,9,301	0/0:10,0:10:26.99:0,27,234	0/0:28,0:28:56.95:0,57,495	0/0:21,0:21:62.99:0,63,547	0/0:24,0:24:53.95:0,54,512	0/0:16,0:16:47.97:0,48,412	0/0:24,1:25:32.78:0,33,510	0/0:18,0:18:53.99:0,54,469	0/0:21,0:21:56.95:0,57,491	0/0:24,0:24:68.97:0,69,595	0/0:23,0:23:62.96:0,63,543	0/0:17,0:17:41.98:0,42,365	0/0:16,0:16:35.94:0,36,302	0/0:16,0:17:41.98:0,42,365	0/0:30,0:30:83.94:0,84,721	0/0:17,0:17:47.96:0,48,410	0/0:21,0:21:59.99:0,60,521	0/0:27,0:27:77.98:0,78,677	0/0:13,0:13:35.99:0,36,313	1/1:2,23:25:60.16:664,60,0	0/0:26,0:27:68.01:0,68,579	0/0:24,0:24:65.98:0,66,572	0/0:13,0:13:35.24:0,35,303
chr10	77452334	.	T	TAA	3954.18	PASS	AB=0.713;AC=29;AF=0.518;AN=56;BaseQRankSum=4.338;DP=314;FS=41.555;HRun=0;HaplotypeScore=55.2831;InbreedingCoeff=-0.5412;MQ=80.37;MQ0=3;MQRankSum=-6.553;QD=16.83;ReadPosRankSum=2.060;VQSLOD=1.7772;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.30:0,90,1407	0/1:1,1:2:34.21:46,0,34	0/0:29,0:20:52.30:0,52,616	0/0:20,0:16:36.17:0,36,356	0/1:9,5:14:88.27:88,0,190	0/1:7,8:15:99:305,0,246	0/1:3,4:7:70.80:119,0,71	0/1:3,12:17:35.34:548,0,35	0/1:5,5:10:99:228,0,132	0/1:9,9:17:99:419,0,236	0/1:6,2:8:65.27:65,0,180	0/1:4,7:12:99:220,0,143	0/1:5,2:6:39.29:39,0,93	0/1:4,2:5:88.13:88,0,105	0/1:4,4:8:99:120,0,123	1/1:0,6:6:9.03:156,9,0	1/1:2,5:7:4.47:150,4,0	0/1:5,3:9:83.83:84,0,135	1/1:2,2:3:6:105,6,0	0/1:4,6:10:99:286,0,99	0/1:2,1:3:17.74:46,0,18	0/1:4,0:4:13.89:14,0,97	1/1:0,5:5:12.04:205,12,0	0/1:4,3:8:64.64:65,0,148	0/1:16,5:18:99:161,0,389	0/1:4,4:7:99:152,0,111	0/1:8,5:13:99:222,0,272	0/1:10,1:10:23.68:24,0,216
chr10	77453566	.	T	TA	3445.64	PASS	AC=42;AF=0.808;AN=52;BaseQRankSum=-1.840;DP=239;FS=0.677;HRun=0;HaplotypeScore=53.3836;InbreedingCoeff=0.7592;MQ=85.51;MQ0=14;MQRankSum=-1.470;QD=24.27;ReadPosRankSum=1.833;VQSLOD=4.4214;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:54.18:0,54,750	1/1:0,4:4:8.96:84,9,0	0/0:26,0:16:18.31:0,18,261	0/0:28,0:15:14.51:0,15,260	0/0:7,0:7:18.38:0,18,79	1/1:0,6:6:12.04:139,12,0	1/1:1,1:1:3:28,3,0	1/1:3,11:13:16.44:278,16,0	./.	1/1:1,11:11:26.98:279,27,0	1/1:0,3:3:9.02:100,9,0	1/1:0,6:6:18.05:208,18,0	./.	1/1:0,2:2:6.02:66,6,0	1/1:1,2:3:9.02:100,9,0	1/1:0,3:3:9.03:104,9,0	1/1:3,18:20:38.99:442,39,0	1/1:2,7:9:21.51:228,22,0	1/1:11,0:11:18.78:270,19,0	1/1:0,4:4:12.03:135,12,0	1/1:0,3:3:6.02:70,6,0	1/1:0,2:2:3.01:33,3,0	1/1:1,4:4:12.03:134,12,0	1/1:0,4:4:9.03:103,9,0	0/0:11,0:11:27.78:0,28,103	1/1:3,14:17:41.93:475,42,0	1/1:0,8:8:9.03:101,9,0	1/1:0,3:3:6.02:68,6,0
chr10	77453567	.	T	TA	3751.72	PASS	AB=1.000;AC=43;AF=0.827;AN=52;BaseQRankSum=-1.874;DP=241;FS=0.698;HRun=7;HaplotypeScore=54.5010;InbreedingCoeff=0.6795;MQ=85.22;MQ0=12;MQRankSum=-3.027;QD=24.85;ReadPosRankSum=0.957;VQSLOD=4.0850;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:51.02:0,51,480	1/1:4,0:4:8.99:91,9,0	0/0:27,0:16:13.82:0,14,160	0/0:28,0:15:6.93:0,7,108	0/1:8,0:8:0.11:0,0,43	1/1:6,0:6:12.04:143,12,0	1/1:1,0:1:3:28,3,0	1/1:14,0:14:32.96:333,33,0	./.	1/1:12,0:11:27.06:302,27,0	1/1:4,0:4:9.03:108,9,0	1/1:6,0:6:18.06:215,18,0	./.	1/1:2,0:2:6.02:72,6,0	1/1:3,0:3:9.03:103,9,0	1/1:3,0:3:9.03:107,9,0	1/1:21,0:20:39.12:466,39,0	1/1:9,0:9:21.04:238,21,0	1/1:2,11:13:33:351,33,0	1/1:4,0:4:12.04:143,12,0	1/1:3,0:3:6.02:72,6,0	1/1:2,0:2:3.01:36,3,0	1/1:5,0:4:12.04:143,12,0	1/1:4,0:4:9.03:108,9,0	0/0:11,0:11:23.76:0,24,76	1/1:17,0:17:45.09:511,45,0	1/1:7,0:7:9.03:108,9,0	1/1:3,0:3:6.02:72,6,0
chr10	77453672	.	CCA	C	392.68	PASS	AB=0.939;AC=16;AF=0.286;AN=56;BaseQRankSum=-3.369;DP=429;FS=27.429;HRun=0;HaplotypeScore=94.4705;InbreedingCoeff=-0.1818;MQ=61.70;MQ0=17;MQRankSum=-2.519;QD=1.86;ReadPosRankSum=-3.044;VQSLOD=-0.5987;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,1:14:37.16:37,0,47	0/0:3,0:3:5.21:0,5,22	0/0:61,0:11:15.94:0,16,84	0/0:45,0:15:8.87:0,9,75	0/1:11,0:10:6.27:33,0,6	0/0:13,0:12:26.10:0,26,132	0/0:8,0:7:13.93:0,14,87	0/1:22,0:21:1.42:1,0,112	0/1:8,2:10:17.75:27,0,18	0/1:13,0:13:2.74:3,0,102	0/1:8,2:10:19.78:20,0,95	0/1:13,1:14:12.39:70,0,12	0/1:5,1:6:0.73:50,0,1	0/1:13,1:14:8.32:8,0,53	0/0:9,0:9:4.40:0,4,89	0/0:9,0:9:14.39:0,14,50	0/1:20,0:17:3.35:3,0,113	0/1:12,1:13:29.22:51,0,29	0/0:15,0:14:18.62:0,19,132	0/0:7,0:7:3.88:0,4,99	0/0:3,0:3:5.48:0,5,26	0/0:6,0:7:1.79:0,2,17	1/1:8,2:9:7.49:57,7,0	0/1:11,1:11:11.73:26,0,12	0/1:20,1:21:38.94:112,0,39	0/0:23,0:22:38.23:0,38,354	0/1:16,0:16:39.27:39,0,105	0/0:15,0:15:0.64:0,1,88
chr10	77455063	.	AAAAAGAAAAG	A	4959.70	PASS	AB=0.995;AC=34;AF=0.607;AN=56;BaseQRankSum=-5.003;DP=537;FS=34.524;HRun=0;HaplotypeScore=168.1144;InbreedingCoeff=-0.2330;MQ=47.32;MQ0=12;MQRankSum=-3.228;QD=10.67;ReadPosRankSum=-4.083;VQSLOD=0.9883;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:47.73:0,48,1732	1/1:12,0:12:10.99:69,11,0	0/0:18,0:3:3.79:0,4,18	0/0:29,0:11:3.86:0,4,255	0/1:32,0:31:80.02:80,0,237	0/1:18,0:18:24.87:129,0,25	0/1:17,1:17:6.46:108,0,6	1/1:17,0:17:4.90:46,5,0	1/1:17,0:17:44.30:555,44,0	0/1:25,0:25:45.23:294,0,45	0/1:18,0:18:35.19:35,0,102	1/1:18,0:17:33.37:312,33,0	1/1:22,1:23:39.57:551,40,0	0/1:8,0:8:8.85:26,0,9	0/1:18,0:18:7.69:139,0,8	0/1:23,0:23:50.30:101,0,50	0/1:30,0:29:80.59:176,0,81	0/1:16,0:15:44.60:82,0,45	1/1:15,0:14:12.51:131,13,0	0/1:28,1:29:72.92:254,0,73	0/1:15,0:15:40.34:40,0,59	1/1:11,0:11:26.98:410,27,0	1/1:15,1:16:36.41:541,36,0	1/1:11,0:11:20.63:161,21,0	0/1:26,0:26:99:175,0,122	0/1:25,0:24:14.70:297,0,15	0/1:20,0:19:32.45:202,0,32	0/1:4,0:3:3.71:45,0,4
chr10	77455064	.	AAAAGAAAAG	A	7528.55	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=-3.627;DP=544;FS=18.084;HRun=0;HaplotypeScore=153.4913;InbreedingCoeff=0.3489;MQ=47.40;MQ0=11;MQRankSum=-0.384;QD=16.05;ReadPosRankSum=-4.376;VQSLOD=1.4203;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:50.04:0,50,1627	1/1:12,0:12:12:113,12,0	0/0:19,0:4:3.40:0,3,24	0/0:31,0:12:6.05:0,6,254	0/1:33,0:32:99:180,0,100	1/1:18,1:19:22.34:294,22,0	1/1:18,0:17:10.99:155,11,0	1/1:18,0:18:25.12:163,25,0	1/1:15,2:17:43.83:681,44,0	1/1:25,0:25:23.36:417,23,0	0/1:19,0:19:26.40:98,0,26	1/1:15,2:16:35.48:465,35,0	1/1:22,1:23:35.26:549,35,0	1/1:8,0:8:12.23:92,12,0	1/1:18,0:18:28.04:290,28,0	1/1:23,0:23:22.32:230,22,0	1/1:30,0:29:28.98:394,29,0	1/1:16,0:15:0.03:163,0,0	1/1:14,0:13:17.87:174,18,0	1/1:29,0:29:7.09:353,7,0	0/1:15,0:15:8.72:78,0,9	1/1:7,4:11:23.69:507,24,0	1/1:13,4:17:37.75:752,38,0	1/1:11,0:11:23.14:219,23,0	0/1:27,0:27:53.07:317,0,53	1/1:26,0:25:35.07:437,35,0	1/1:19,1:19:14.53:354,15,0	1/1:3,0:3:4.83:55,5,0
chr10	77455066	.	AAGAAAAG	A	12029.36	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=0.119;DP=555;FS=0.000;HRun=0;HaplotypeScore=125.8600;InbreedingCoeff=0.8793;MQ=48.57;MQ0=12;MQRankSum=-0.163;QD=25.54;ReadPosRankSum=-1.185;VQSLOD=4.2214;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:46.84:0,47,1387	1/1:12,0:12:12.04:196,12,0	0/0:24,0:7:7.86:0,8,103	0/0:34,0:14:6.08:0,6,246	1/1:35,0:34:33.08:551,33,0	1/1:14,2:17:38.13:552,38,0	1/1:14,1:16:28.75:312,29,0	1/1:20,0:20:34.84:322,35,0	1/1:19,0:19:47.65:652,48,0	1/1:24,0:24:59.97:773,60,0	1/1:17,1:18:32.18:288,32,0	1/1:18,0:17:26.38:415,26,0	1/1:24,0:24:27.07:587,27,0	1/1:8,0:8:15.03:201,15,0	1/1:18,0:18:47.91:624,48,0	1/1:23,1:24:53.11:601,53,0	1/1:31,0:30:75.77:813,76,0	1/1:15,0:14:38.51:438,39,0	1/1:13,0:12:29.61:282,30,0	1/1:28,0:28:53.30:666,53,0	1/1:12,1:14:33.61:297,34,0	1/1:11,0:11:29.12:452,29,0	1/1:17,0:17:41.15:756,41,0	1/1:11,0:11:22.92:218,23,0	1/1:27,0:27:52.04:572,52,0	1/1:27,0:27:67.12:719,67,0	1/1:19,1:19:50.73:658,51,0	1/1:2,0:2:6.02:84,6,0
chr10	77455067	.	AGAAAAG	A	13301.82	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-0.150;DP=555;FS=2.279;HRun=0;HaplotypeScore=112.6214;InbreedingCoeff=0.8043;MQ=48.58;MQ0=13;MQRankSum=0.239;QD=26.34;ReadPosRankSum=-0.686;VQSLOD=4.6853;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:36.67:0,37,1261	1/1:0,12:12:12.04:257,12,0	0/0:24,0:7:7.85:0,8,101	0/1:37,0:14:0.73:1,0,236	1/1:35,0:36:56.45:792,56,0	1/1:12,4:17:38.29:606,38,0	1/1:16,0:16:28.92:297,29,0	1/1:19,0:20:36.08:332,36,0	1/1:16,0:19:44.14:619,44,0	1/1:0,23:23:60.09:867,60,0	1/1:2,16:18:32.98:376,33,0	1/1:17,0:16:22.39:395,22,0	1/1:23,0:23:27.26:564,27,0	1/1:8,0:8:14.97:234,15,0	1/1:17,1:18:48.02:638,48,0	1/1:20,2:23:52.63:703,53,0	1/1:29,1:30:75.39:997,75,0	1/1:14,1:14:38.97:528,39,0	1/1:13,0:12:32.73:303,33,0	1/1:1,27:28:54.12:728,54,0	1/1:14,0:14:34.19:353,34,0	1/1:11,0:11:29.12:425,29,0	1/1:16,0:16:43.53:727,44,0	1/1:11,0:11:22.88:217,23,0	1/1:26,1:27:64.64:724,65,0	1/1:2,26:27:72.85:857,73,0	1/1:15,1:19:52.16:660,52,0	1/1:2,0:2:6.02:103,6,0
chr10	77455070	.	AAAG	A	6607.01	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=3.332;DP=565;FS=2.343;HRun=0;HaplotypeScore=113.2218;InbreedingCoeff=0.8680;MQ=48.76;MQ0=13;MQRankSum=0.913;QD=14.09;ReadPosRankSum=-0.157;VQSLOD=4.7239;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:59.73:0,60,1158	1/1:12,0:12:11.98:116,12,0	0/0:30,1:8:9.95:0,10,129	0/0:39,0:14:11.23:0,11,282	1/1:37,1:37:63.54:488,64,0	1/1:18,0:18:27.75:276,28,0	1/1:17,0:16:5.32:100,5,0	1/1:22,0:22:22.83:151,23,0	1/1:17,0:18:50.18:399,50,0	1/1:23,0:23:42.57:372,43,0	1/1:18,0:18:29.39:186,29,0	1/1:17,0:16:36.39:283,36,0	1/1:22,3:25:47.70:358,48,0	1/1:8,0:8:15.64:123,16,0	1/1:18,0:18:31.81:259,32,0	1/1:22,0:22:38.82:321,39,0	1/1:31,0:30:61.80:505,62,0	1/1:15,0:14:23.50:209,24,0	1/1:10,0:9:13.44:85,13,0	1/1:28,0:28:53.22:371,53,0	1/1:15,0:15:21.82:149,22,0	1/1:11,0:11:26.34:197,26,0	1/1:15,0:15:39.47:378,39,0	1/1:10,0:10:20.70:145,21,0	1/1:25,0:25:54.08:414,54,0	1/1:28,0:27:49.94:387,50,0	1/1:23,0:22:31.21:282,31,0	1/1:2,0:2:6:52,6,0
chr10	77455072	.	AG	A	6774.25	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=3.647;DP=554;FS=0.000;HRun=1;HaplotypeScore=95.7808;InbreedingCoeff=0.7145;MQ=50.41;MQ0=13;MQRankSum=0.470;QD=13.66;ReadPosRankSum=-0.107;VQSLOD=3.6951;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:59.87:0,60,787	1/1:12,0:12:11.89:84,12,0	0/0:33,1:10:6.68:0,7,169	0/1:43,0:15:6.28:6,0,186	1/1:32,1:32:69.06:567,69,0	1/1:17,1:18:33.65:253,34,0	1/1:18,0:17:12.35:101,12,0	1/1:20,0:20:23.83:157,24,0	1/1:18,1:19:54.58:364,55,0	1/1:23,0:23:44.44:364,44,0	1/1:18,0:18:30.25:184,30,0	1/1:13,0:13:35.19:248,35,0	1/1:25,0:25:52.45:379,52,0	1/1:8,0:8:16.56:138,17,0	1/1:18,0:18:39.65:306,40,0	1/1:22,0:22:48.27:355,48,0	1/1:30,0:29:66.64:522,67,0	1/1:15,0:14:26.47:209,26,0	1/1:9,0:8:12.42:90,12,0	1/1:28,0:28:53.06:357,53,0	1/1:14,0:14:28.25:188,28,0	1/1:10,0:10:25.89:171,26,0	1/1:14,0:14:39.56:279,40,0	1/1:9,0:9:20.78:149,21,0	1/1:25,0:25:53.87:428,54,0	1/1:27,0:27:51.13:414,51,0	1/1:22,1:22:44.55:406,45,0	1/1:2,0:2:6:52,6,0
chr10	77456156	.	C	CG	18081.38	PASS	AB=0.978;AC=52;AF=0.929;AN=56;BaseQRankSum=-6.250;DP=634;FS=0.000;HRun=0;HaplotypeScore=58.5461;InbreedingCoeff=0.6220;MQ=57.32;MQ0=21;MQRankSum=-2.186;QD=30.65;ReadPosRankSum=0.630;VQSLOD=4.4836;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,117,1566	1/1:1,8:9:24.01:349,24,0	0/1:41,1:14:0.50:0,0,161	0/1:44,1:11:54.18:54,0,82	1/1:1,19:20:47.81:653,48,0	1/1:1,19:20:48.16:753,48,0	1/1:1,23:25:45.15:710,45,0	1/1:0,37:37:92.59:1165,93,0	1/1:1,16:17:42.14:658,42,0	1/1:0,10:11:27.01:351,27,0	1/1:0,17:17:41.90:566,42,0	1/1:0,19:19:48.16:753,48,0	1/1:2,18:19:45.15:692,45,0	1/1:1,16:17:39.13:610,39,0	1/1:0,28:28:63.20:991,63,0	1/1:1,22:23:54.18:848,54,0	1/1:0,25:25:63.21:990,63,0	1/1:3,15:17:38.64:698,39,0	1/1:5,24:26:71.88:987,72,0	1/1:1,16:17:38.92:570,39,0	1/1:0,8:8:15.05:237,15,0	1/1:1,25:25:62.96:920,63,0	1/1:0,11:12:33.11:507,33,0	1/1:0,26:26:69.23:1086,69,0	1/1:2,16:18:45.15:710,45,0	1/1:0,21:21:63.08:904,63,0	1/1:1,28:28:57.29:894,57,0	1/1:2,9:9:27.09:424,27,0
chr10	77457135	.	GT	G	15692.34	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=3.531;DP=695;FS=3.892;HRun=7;HaplotypeScore=73.7725;InbreedingCoeff=0.9983;MQ=77.38;MQ0=0;MQRankSum=-5.596;QD=26.60;ReadPosRankSum=3.870;VQSLOD=5.6404;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,141,1753	1/1:1,7:8:21.05:214,21,0	0/0:23,0:22:57.09:0,57,668	0/0:27,1:28:46.78:0,47,560	1/1:1,28:29:75.16:765,75,0	1/1:1,24:25:57.13:582,57,0	1/1:4,17:21:51.11:520,51,0	1/1:2,24:26:69.10:685,69,0	1/1:1,28:29:72.16:734,72,0	1/1:3,29:33:87.19:885,87,0	1/1:4,17:21:51.11:518,51,0	1/1:1,25:26:69.16:704,69,0	1/1:1,14:15:32.99:335,33,0	1/1:0,12:12:33.08:337,33,0	1/1:0,28:28:78.18:796,78,0	1/1:1,32:33:90.13:918,90,0	1/1:1,28:29:78.18:796,78,0	1/1:1,26:27:72.16:733,72,0	1/1:2,14:16:45.10:458,45,0	1/1:1,19:20:57.13:581,57,0	1/1:2,34:36:90.20:918,90,0	1/1:0,16:16:48.11:490,48,0	1/1:1,17:18:41.76:428,42,0	1/1:2,36:38:99:1071,105,0	1/1:3,21:24:63.14:643,63,0	1/1:1,17:18:51.08:511,51,0	1/1:0,24:24:66.10:673,66,0	1/1:4,14:18:39.09:398,39,0
chr10	77458580	.	CT	C	4883.33	PASS	AB=0.585;AC=41;AF=0.732;AN=56;BaseQRankSum=-1.554;DP=585;FS=8.580;HRun=14;HaplotypeScore=80.0562;InbreedingCoeff=0.4366;MQ=67.74;MQ0=2;MQRankSum=0.063;QD=10.92;ReadPosRankSum=2.684;VQSLOD=4.2492;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,1:42:72.39:0,72,757	1/1:2,3:5:5.90:41,6,0	0/0:29,0:16:1.89:0,2,106	0/0:11,0:6:4.29:0,4,33	0/0:19,0:32:69.85:0,70,398	0/1:6,17:24:24.91:276,0,25	1/1:4,25:29:40.63:424,41,0	1/1:12,18:31:31.78:271,32,0	0/1:7,7:14:7.09:102,0,7	1/1:9,18:28:52.18:344,52,0	1/1:4,16:20:29.47:195,29,0	1/1:8,13:21:23.85:232,24,0	1/1:13,5:18:1.94:119,2,0	0/1:2,11:14:17.84:174,0,18	0/1:6,13:19:41.86:184,0,42	1/1:3,12:16:28.79:191,29,0	1/1:8,23:31:58.96:397,59,0	1/1:2,9:11:23.79:164,24,0	1/1:3,9:13:28.77:191,29,0	1/1:10,14:25:34.50:229,35,0	1/1:6,4:10:14.78:101,15,0	1/1:5,14:19:30.05:204,30,0	1/1:7,11:20:30.60:188,31,0	1/1:6,11:18:29.73:205,30,0	0/0:4,0:23:25.81:0,26,140	1/1:11,17:28:47.95:328,48,0	0/1:4,16:20:16.97:187,0,17	1/1:4,8:12:15.32:135,15,0
chr10	77458682	.	GTTTTTT	G	8938.88	PASS	AB=0.600;AC=49;AF=0.875;AN=56;BaseQRankSum=4.695;DP=451;FS=22.912;HRun=16;HaplotypeScore=108.1571;InbreedingCoeff=0.7315;MQ=57.68;MQ0=0;MQRankSum=-7.151;QD=22.86;ReadPosRankSum=6.598;VQSLOD=0.8455;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:92.02:0,92,2431	1/1:1,4:6:8.86:123,9,0	0/0:16,0:9:20.45:0,20,366	0/0:12,0:9:14.01:0,14,263	1/1:1,0:20:28.15:148,28,0	1/1:2,10:13:9.36:447,9,0	1/1:3,17:21:33.03:559,33,0	1/1:5,14:19:37.18:394,37,0	1/1:4,17:21:41.88:668,42,0	1/1:3,11:14:30.04:534,30,0	1/1:6,4:10:16.78:284,17,0	0/1:4,8:12:44.58:246,0,45	1/1:5,0:23:18.38:170,18,0	1/1:0,10:10:15.05:270,15,0	1/1:4,16:20:38.60:645,39,0	1/1:2,16:18:27.07:486,27,0	1/1:9,8:16:35.90:524,36,0	1/1:5,8:13:11.84:216,12,0	1/1:5,6:11:14.69:154,15,0	1/1:1,10:13:26.88:385,27,0	1/1:5,1:6:8.86:71,9,0	1/1:3,8:11:11.89:216,12,0	1/1:2,10:12:20.84:306,21,0	1/1:0,18:18:15:261,15,0	1/1:2,1:20:17.78:163,18,0	1/1:7,19:26:50.53:881,51,0	1/1:5,24:29:35.34:647,35,0	1/1:5,2:8:8.84:143,9,0
chr10	77458785	.	C	CACCATCA	14950.31	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=1.298;DP=271;FS=26.286;HRun=0;HaplotypeScore=102.5437;InbreedingCoeff=0.7451;MQ=103.88;MQ0=0;MQRankSum=-11.508;QD=83.06;ReadPosRankSum=5.180;VQSLOD=3.2259;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,3527	1/1:0,0:1:3.01:83,3,0	0/0:24,0:24:63:0,63,1562	0/0:22,0:22:63.01:0,63,1381	1/1:0,4:8:9.03:325,9,0	1/1:0,1:3:9.03:283,9,0	1/1:0,5:14:27.09:979,27,0	1/1:0,6:9:27.08:897,27,0	1/1:0,6:8:24.08:910,24,0	1/1:0,1:12:33.11:1043,33,0	1/1:1,3:8:24.07:693,24,0	1/1:1,3:5:12.04:453,12,0	1/1:0,3:7:21.07:680,21,0	1/1:2,2:6:15.05:510,15,0	1/1:1,4:9:24.08:807,24,0	1/1:3,6:14:39.13:1226,39,0	1/1:1,9:14:36.12:1328,36,0	1/1:0,2:3:9.03:337,9,0	1/1:0,3:5:15.05:546,15,0	1/1:0,5:11:33.11:1181,33,0	1/1:0,8:9:18.06:751,18,0	1/1:0,0:4:12.04:305,12,0	1/1:0,0:1:3.01:125,3,0	1/1:2,11:14:15.05:626,15,0	1/1:1,1:3:6.02:204,6,0	1/1:1,2:3:6.02:251,6,0	1/1:2,0:8:15.05:408,15,0	./.
chr10	77458800	.	GCT	G	2856.41	PASS	AB=0.744;AC=38;AF=0.679;AN=56;BaseQRankSum=9.006;DP=243;FS=116.089;HRun=0;HaplotypeScore=109.3189;InbreedingCoeff=-0.0994;MQ=105.30;MQ0=0;MQRankSum=-8.800;QD=18.43;ReadPosRankSum=4.123;VQSLOD=0.6100;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,2358	1/1:0,1:1:3.01:44,3,0	0/0:26,0:26:78.26:0,78,1487	0/0:20,0:21:59.79:0,60,1148	1/1:5,3:8:2.61:62,3,0	1/1:2,2:4:6.02:84,6,0	0/1:5,4:9:99:148,0,184	0/1:4,0:4:22.72:23,0,113	0/1:7,3:10:99:118,0,207	1/1:1,10:11:33.11:466,33,0	1/1:5,4:9:15.05:198,15,0	1/1:2,1:3:3.01:42,3,0	1/1:2,4:6:12.04:169,12,0	0/1:1,2:3:44.22:76,0,44	0/1:4,4:8:36.02:171,0,36	0/1:4,6:9:35.99:249,0,36	0/1:7,5:12:99:193,0,246	0/1:2,1:3:34.63:35,0,93	0/1:1,2:3:51.38:75,0,51	1/1:4,6:10:20.27:204,20,0	0/1:8,0:8:34.74:39,0,35	1/1:2,4:6:17.31:189,17,0	1/1:2,1:3:5.69:31,6,0	0/1:10,1:11:18.78:19,0,144	1/1:1,1:2:3.01:41,3,0	0/1:1,2:3:51.78:53,0,52	1/1:1,6:7:18.06:252,18,0	1/1:1,0:1:3.01:44,3,0
chr10	77458801	.	C	CA	1335.09	PASS	AB=0.945;AC=36;AF=0.643;AN=56;BaseQRankSum=9.191;DP=251;FS=88.969;HRun=0;HaplotypeScore=112.1960;InbreedingCoeff=-0.1539;MQ=105.15;MQ0=0;MQRankSum=-7.250;QD=8.24;ReadPosRankSum=5.440;VQSLOD=0.0024;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,1613	1/1:1,0:1:2.98:22,3,0	0/0:27,0:27:74.98:0,75,992	0/0:21,0:21:57.12:0,57,771	0/1:8,0:8:14.94:15,0,20	1/1:4,0:4:5.97:44,6,0	0/1:9,0:9:64.72:65,0,128	0/1:4,1:5:23.58:24,0,75	0/1:10,0:10:25.03:25,0,126	1/1:13,0:13:32.81:271,33,0	1/1:9,0:9:14.89:108,15,0	1/1:3,0:3:2.98:22,3,0	1/1:6,0:6:11.92:86,12,0	0/1:3,0:3:27.46:33,0,27	0/1:8,0:8:21.48:72,0,21	0/1:10,0:9:13.99:110,0,14	0/1:12,0:12:77.39:77,0,165	0/1:3,0:3:12.08:12,0,75	0/1:4,0:4:29.94:38,0,30	1/1:9,1:10:3.40:93,3,0	0/1:9,1:10:15.40:15,0,29	1/1:4,2:6:17.90:133,18,0	0/1:1,3:4:1.82:30,0,2	0/1:10,1:11:22.78:23,0,102	1/1:2,0:2:2.99:24,3,0	0/1:3,0:3:13.54:14,0,36	1/1:6,1:7:17.85:128,18,0	1/1:1,0:1:2.98:21,3,0
chr10	77458971	.	T	TGCAA	6683.61	PASS	AB=1.000;AC=53;AF=0.981;AN=54;BaseQRankSum=0.787;DP=129;FS=8.040;HRun=0;HaplotypeScore=93.4383;InbreedingCoeff=0.0050;MQ=58.28;MQ0=0;MQRankSum=-1.732;QD=51.81;ReadPosRankSum=1.646;VQSLOD=5.7216;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:30.10:557,30,0	1/1:0,5:5:15.05:287,15,0	1/1:5,0:4:2.44:15,2,0	0/1:4,0:4:7.03:7,0,10	1/1:0,13:13:38.87:637,39,0	1/1:0,1:1:3.01:56,3,0	1/1:0,4:4:9.03:166,9,0	1/1:0,10:10:30.10:649,30,0	1/1:0,3:3:9.03:176,9,0	1/1:0,6:6:18.06:363,18,0	1/1:0,5:5:15.05:265,15,0	./.	1/1:0,3:3:9.03:153,9,0	1/1:0,2:2:6.02:112,6,0	1/1:0,1:1:3.01:55,3,0	1/1:0,2:2:6.02:117,6,0	1/1:0,3:3:9.03:165,9,0	1/1:0,1:1:3.01:68,3,0	1/1:0,4:4:12.04:267,12,0	1/1:0,9:9:27.09:482,27,0	1/1:0,6:6:18.06:332,18,0	1/1:0,5:5:15.05:269,15,0	1/1:0,6:6:18.06:325,18,0	1/1:0,3:3:9.03:157,9,0	1/1:0,7:7:21.07:385,21,0	1/1:0,7:7:21.07:432,21,0	1/1:0,2:2:3.01:62,3,0	1/1:0,2:2:6.02:124,6,0
chr10	77459088	.	CT	C	1152.20	PASS	AC=38;AF=0.905;AN=42;BaseQRankSum=1.273;DP=97;FS=2.829;HRun=1;HaplotypeScore=35.9167;InbreedingCoeff=0.3115;MQ=52.52;MQ0=0;MQRankSum=-0.640;QD=12.52;ReadPosRankSum=2.237;VQSLOD=2.4350;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,6:6:17.98:162,18,0	0/0:1,0:1:3.01:0,3,48	0/0:2,0:2:3.01:0,3,48	1/1:1,7:8:1.12:3,1,0	1/1:0,6:5:9.03:112,9,0	./.	./.	1/1:0,1:1:3.01:41,3,0	1/1:0,3:3:8.95:83,9,0	1/1:0,8:8:2.11:5,2,0	1/1:0,4:4:6.01:82,6,0	1/1:0,4:4:1.17:22,1,0	1/1:0,5:5:4.24:37,4,0	./.	1/1:0,4:4:6.01:68,6,0	1/1:0,1:1:3.01:32,3,0	./.	1/1:0,3:3:8.04:32,8,0	1/1:0,11:11:14.77:83,15,0	./.	1/1:0,6:6:10.01:39,10,0	1/1:0,6:6:10.80:91,11,0	./.	1/1:0,10:10:26.36:209,26,0	1/1:0,3:3:9.01:88,9,0	1/1:0,2:2:4.25:34,4,0	1/1:0,1:1:3:29,3,0
chr10	77459093	.	G	GA	1097.34	PASS	AC=34;AF=0.773;AN=44;BaseQRankSum=-0.666;DP=97;FS=0.000;HRun=1;HaplotypeScore=36.1394;InbreedingCoeff=0.3948;MQ=52.52;MQ0=0;MQRankSum=0.113;QD=12.61;ReadPosRankSum=1.220;VQSLOD=1.9827;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,6:6:18.05:196,18,0	0/0:1,0:1:3.01:0,3,39	0/0:2,0:2:3:0,3,29	1/1:1,7:8:9.65:49,10,0	1/1:0,6:5:2.81:32,3,0	./.	./.	0/0:0,1:1:0.47:0,0,1	1/1:0,3:3:8.02:67,8,0	1/1:0,8:8:9.62:48,10,0	0/0:0,4:4:0.89:0,1,3	1/1:0,4:4:8.90:65,9,0	1/1:0,5:5:2.66:24,3,0	0/0:0,1:1:0.89:0,1,2	1/1:0,4:4:3.48:31,3,0	1/1:0,1:1:3.01:35,3,0	./.	1/1:0,3:3:8.52:41,9,0	1/1:0,11:11:26.74:175,27,0	./.	1/1:0,6:6:15.68:75,16,0	1/1:0,6:6:4.15:21,4,0	./.	1/1:0,10:10:20.39:163,20,0	1/1:0,3:3:9.02:97,9,0	1/1:0,2:2:5.91:51,6,0	1/1:0,1:1:3.01:32,3,0
chr10	77459214	.	T	TGGG	329.97	PASS	AB=0.806;AC=8;AF=0.200;AN=40;BaseQRankSum=4.618;DP=175;FS=9.377;HRun=0;HaplotypeScore=28.9327;InbreedingCoeff=0.0665;MQ=35.84;MQ0=70;MQRankSum=-3.715;QD=8.92;ReadPosRankSum=3.978;VQSLOD=0.5672;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:9:15.04:0,15,222	./.	0/0:31,0:2:5.23:0,5,63	0/0:21,0:3:5.29:0,5,22	0/0:10,0:7:12.18:0,12,130	0/0:2,0:2:6.02:0,6,92	./.	0/0:7,0:4:9:0,9,125	./.	0/0:6,0:4:9.03:0,9,153	0/0:8,0:6:12.04:0,12,170	./.	./.	./.	0/0:2,0:1:3.01:0,3,38	./.	0/1:11,4:13:99:132,0,200	0/0:9,1:5:9.03:0,9,145	0/1:2,2:3:46.47:92,0,46	0/0:7,0:5:12.04:0,12,205	0/1:5,1:5:88.63:89,0,98	1/1:0,1:1:3.01:48,3,0	1/1:0,1:1:3.01:49,3,0	./.	0/0:5,0:4:9.03:0,9,154	0/0:4,0:4:11.99:0,12,174	0/0:4,0:2:2.97:0,3,49	0/1:9,1:5:36.87:37,0,130
chr10	77459334	.	GTTT	G	3193.63	PASS	AB=0.851;AC=45;AF=0.804;AN=56;BaseQRankSum=7.119;DP=295;FS=10.597;HRun=11;HaplotypeScore=86.9887;InbreedingCoeff=0.3297;MQ=63.80;MQ0=16;MQRankSum=-4.372;QD=14.52;ReadPosRankSum=5.400;VQSLOD=0.6290;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:47.51:0,48,768	1/1:2,4:5:12.03:132,12,0	0/0:24,0:11:15.51:0,16,96	0/0:29,0:12:8.03:0,8,79	0/1:22,0:20:10.53:11,0,178	1/1:3,3:6:8.99:98,9,0	0/1:3,4:7:9.49:116,0,9	1/1:5,4:14:29.12:268,29,0	1/1:0,3:3:9.02:97,9,0	1/1:5,10:14:27.08:302,27,0	1/1:1,4:9:18.84:182,19,0	1/1:2,4:5:12.03:131,12,0	1/1:3,6:9:18.04:197,18,0	1/1:2,2:3:6.01:66,6,0	0/1:3,5:10:20.49:190,0,20	1/1:1,6:7:18.05:199,18,0	1/1:6,3:5:8.04:71,8,0	1/1:1,4:5:15.02:155,15,0	1/1:6,3:7:11.98:126,12,0	1/1:2,4:7:15.02:157,15,0	0/1:5,0:3:10.23:14,0,10	1/1:2,6:10:23.98:235,24,0	1/1:3,4:8:3.29:133,3,0	1/1:1,0:1:2.22:7,2,0	0/1:20,0:20:15.50:41,0,16	1/1:4,3:7:13.42:133,13,0	1/1:4,7:11:21.04:236,21,0	1/1:2,1:3:6:61,6,0
chr10	77459338	.	TTTTTTTTG	T	7059.83	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=3.349;DP=298;FS=2.677;HRun=0;HaplotypeScore=94.0946;InbreedingCoeff=0.2835;MQ=61.42;MQ0=21;MQRankSum=-2.721;QD=25.40;ReadPosRankSum=3.426;VQSLOD=4.4260;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:50.97:0,51,1232	1/1:6,0:5:12.04:258,12,0	0/1:22,0:10:8.53:10,0,9	0/1:26,0:9:2.16:2,0,37	1/1:22,0:20:44.61:501,45,0	1/1:7,0:7:9.03:194,9,0	0/1:8,0:7:3.54:267,0,4	1/1:14,0:13:29.92:365,30,0	1/1:3,0:3:9.03:193,9,0	1/1:18,0:15:32.76:643,33,0	1/1:10,0:10:18.70:282,19,0	1/1:7,0:5:12.04:256,12,0	1/1:9,0:9:18.06:392,18,0	1/1:5,0:4:6.02:129,6,0	0/1:10,0:10:61.99:318,0,62	1/1:7,0:7:18.06:385,18,0	1/1:10,0:4:9.03:166,9,0	1/1:6,0:5:14.72:258,15,0	1/1:9,0:6:11.53:200,12,0	1/1:8,0:8:17:282,17,0	1/1:6,0:4:6.75:91,7,0	1/1:13,0:12:22.78:410,23,0	0/1:8,0:7:13.88:228,0,14	0/0:1,0:1:2.04:0,2,6	1/1:9,10:19:27.01:418,27,0	1/1:10,0:9:8.69:281,9,0	1/1:11,0:10:21.07:458,21,0	1/1:4,0:3:5.51:73,6,0
chr10	77459345	.	TG	T	1586.33	PASS	AB=0.963;AC=51;AF=0.911;AN=56;BaseQRankSum=5.210;DP=290;FS=4.468;HRun=1;HaplotypeScore=79.2612;InbreedingCoeff=0.2787;MQ=45.20;MQ0=27;MQRankSum=-1.718;QD=5.88;ReadPosRankSum=4.009;VQSLOD=0.9222;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:17:36.50:0,37,349	1/1:6,0:5:10.71:43,11,0	0/1:13,1:5:9.79:10,0,29	0/1:20,1:5:2.35:2,0,15	1/1:17,1:16:41.02:246,41,0	1/1:6,0:5:8.04:32,8,0	1/1:10,0:7:6.23:44,6,0	1/1:14,0:12:24.43:119,24,0	1/1:4,0:4:8.20:36,8,0	1/1:21,0:17:17.61:104,18,0	1/1:11,0:10:17.81:70,18,0	1/1:8,0:6:10.63:42,11,0	1/1:8,0:8:16.30:70,16,0	1/1:4,0:3:5.36:22,5,0	0/1:9,0:9:5:68,0,5	1/1:8,0:8:16.23:67,16,0	1/1:12,0:4:8.02:33,8,0	1/1:8,0:5:12.16:45,12,0	1/1:7,0:4:10.18:39,10,0	1/1:8,0:8:15.10:62,15,0	1/1:7,0:4:2.67:22,3,0	1/1:11,0:10:21.62:92,22,0	1/1:8,0:7:15.91:66,16,0	1/1:4,0:3:2.68:11,3,0	1/1:18,1:19:26.57:205,27,0	1/1:12,0:11:0.91:64,1,0	1/1:9,0:8:19:81,19,0	1/1:3,0:2:5.09:19,5,0
chr10	77459346	.	GTTTTT	G	4065.66	PASS	AB=0.782;AC=40;AF=0.741;AN=54;BaseQRankSum=7.322;DP=289;FS=2.766;HRun=14;HaplotypeScore=84.2150;InbreedingCoeff=0.1104;MQ=40.09;MQ0=29;MQRankSum=0.274;QD=17.45;ReadPosRankSum=6.170;VQSLOD=0.5001;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:42.14:0,42,946	1/1:2,4:5:12.04:174,12,0	./.	0/0:18,0:5:3.01:0,3,36	0/1:19,0:17:67.65:87,0,68	1/1:3,3:5:9.03:130,9,0	0/1:6,4:7:7.84:157,0,8	0/1:10,4:12:10.42:164,0,10	1/1:1,3:4:9.03:128,9,0	0/1:10,10:17:32.68:374,0,33	1/1:7,4:10:12.01:174,12,0	1/1:4,4:6:12.04:171,12,0	1/1:2,6:8:18.06:260,18,0	1/1:2,2:3:6.02:87,6,0	0/1:4,5:9:58.38:207,0,58	1/1:2,6:8:18.06:262,18,0	1/1:9,3:4:8.90:102,9,0	1/1:4,4:5:12.02:173,12,0	1/1:4,3:4:9.01:135,9,0	1/1:4,4:8:11.44:174,11,0	0/1:7,0:4:3.33:52,0,3	1/1:5,6:10:18.05:252,18,0	0/1:4,4:7:3.14:135,0,3	0/0:5,0:3:3:0,3,28	1/1:19,0:19:22.61:158,23,0	0/1:9,3:11:31.11:156,0,31	1/1:3,7:9:21.07:308,21,0	1/1:2,1:2:3.01:46,3,0
chr10	77459353	.	T	TTGGG	4375.17	PASS	AB=0.917;AC=44;AF=0.815;AN=54;BaseQRankSum=4.332;DP=305;FS=28.789;HRun=0;HaplotypeScore=81.7993;InbreedingCoeff=0.5480;MQ=36.29;MQ0=40;MQRankSum=-3.260;QD=19.45;ReadPosRankSum=2.654;VQSLOD=2.3987;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:15:45.09:0,45,773	1/1:4,2:5:11.94:98,12,0	./.	0/0:16,0:3:3.48:0,3,32	0/0:18,0:16:18.03:0,18,288	1/1:4,3:5:8.96:79,9,0	1/1:10,3:10:22.22:331,22,0	1/1:9,3:10:23.89:359,24,0	1/1:5,2:6:11.97:153,12,0	1/1:17,7:20:49.11:655,49,0	1/1:7,3:8:14.97:157,15,0	1/1:7,3:8:17.93:205,18,0	1/1:8,2:9:20.74:179,21,0	1/1:4,1:3:5.96:44,6,0	0/1:9,0:8:34.67:160,0,35	1/1:7,3:9:17.90:134,18,0	1/1:9,3:4:8.99:104,9,0	1/1:9,0:4:12.01:111,12,0	1/1:10,0:4:12.01:143,12,0	1/1:7,2:11:23.96:322,24,0	1/1:5,2:4:4.21:98,4,0	1/1:8,3:9:19.93:164,20,0	0/1:8,2:9:29.29:112,0,29	1/1:3,2:3:2.97:20,3,0	0/0:18,0:18:15.96:0,16,243	1/1:6,6:11:32.97:577,33,0	1/1:10,0:10:20.79:146,21,0	1/1:2,0:1:2.99:24,3,0
chr10	77461123	.	TTATGC	T	30378.88	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=3.017;DP=638;FS=0.447;HRun=0;HaplotypeScore=148.5320;InbreedingCoeff=0.9679;MQ=78.46;MQ0=0;MQRankSum=-8.783;QD=54.64;ReadPosRankSum=6.896;VQSLOD=5.2270;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,3500	1/1:1,13:14:33.11:700,33,0	0/0:21,0:21:57.14:0,57,1541	0/0:21,0:21:63.22:0,63,1818	1/1:1,32:33:57.19:1249,57,0	1/1:0,21:21:60.21:1397,60,0	1/1:0,25:25:57.06:1219,57,0	1/1:0,24:24:72.20:1495,72,0	1/1:1,27:28:78.27:1807,78,0	1/1:1,9:10:27.08:576,27,0	1/1:1,7:8:15.05:317,15,0	1/1:0,34:34:78.27:1783,78,0	1/1:1,16:17:45.15:1042,45,0	1/1:0,23:23:54.19:1242,54,0	1/1:0,49:49:99:2935,129,0	1/1:0,51:51:99:3070,132,0	1/1:0,40:40:99:2302,99,0	1/1:0,14:14:36.12:838,36,0	1/1:0,14:14:36.12:817,36,0	1/1:1,16:17:39.13:899,39,0	1/1:0,16:16:29.91:697,30,0	1/1:1,21:23:47.99:1021,48,0	1/1:0,7:7:14.97:349,15,0	1/1:0,28:28:63.21:1435,63,0	1/1:0,17:17:45.08:931,45,0	1/1:0,17:17:48.13:1002,48,0	1/1:0,20:20:45.15:1047,45,0	1/1:0,6:6:9.03:210,9,0
chr10	77461435	.	CTG	C	23129.05	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=9.465;DP=771;FS=0.000;HRun=0;HaplotypeScore=147.5090;InbreedingCoeff=0.9995;MQ=84.61;MQ0=2;MQRankSum=-5.508;QD=37.01;ReadPosRankSum=3.101;VQSLOD=6.4692;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,147,2614	1/1:0,17:17:41.83:588,42,0	0/0:26,0:26:69.78:0,70,1091	0/0:27,0:26:66.21:0,66,1121	0/0:20,0:20:45.15:0,45,804	1/1:0,21:21:57.19:798,57,0	1/1:1,29:30:84.28:1177,84,0	1/1:4,30:34:90.25:1207,90,0	1/1:3,26:29:72.24:1008,72,0	1/1:4,21:25:63.19:858,63,0	1/1:1,9:10:27.09:377,27,0	1/1:0,34:34:99:1385,99,0	1/1:0,24:24:60.20:840,60,0	1/1:0,25:25:66.22:924,66,0	1/1:1,33:33:90.30:1261,90,0	1/1:1,21:22:63.21:882,63,0	1/1:2,41:43:99:1550,111,0	1/1:3,18:21:51.17:714,51,0	1/1:1,22:23:66.18:887,66,0	1/1:2,20:22:57.19:794,57,0	1/1:4,65:69:99:2437,175,0	1/1:3,25:28:75.25:1050,75,0	1/1:2,15:17:42.14:587,42,0	1/1:1,34:35:99:1387,99,0	0/0:21,0:21:60.21:0,60,1079	1/1:0,32:32:96.29:1324,96,0	1/1:0,19:19:51.17:714,51,0	1/1:2,9:10:27.09:378,27,0
chr10	77461834	.	T	TCTTGGCA	51747.44	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-5.646;DP=693;FS=0.000;HRun=0;HaplotypeScore=151.0507;InbreedingCoeff=0.9917;MQ=69.22;MQ0=0;MQRankSum=-13.909;QD=86.39;ReadPosRankSum=1.986;VQSLOD=5.7237;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,120,2978	1/1:0,5:5:15.05:506,15,0	0/0:27,0:26:75.04:0,75,1661	0/0:22,0:22:39.10:0,39,941	1/1:8,15:25:54.18:1894,54,0	1/1:2,15:18:45.15:1705,45,0	1/1:11,9:20:36.12:1226,36,0	1/1:19,18:38:99:3462,99,0	1/1:6,20:26:72.25:2678,72,0	1/1:10,17:28:78.27:2664,78,0	1/1:3,9:13:36.12:1180,36,0	1/1:7,21:29:78.27:2806,78,0	1/1:5,16:22:54.19:1995,54,0	1/1:12,13:26:69.24:2288,69,0	1/1:13,28:44:99:3791,105,0	1/1:8,22:30:78.27:2939,78,0	1/1:7,15:25:45.15:1643,45,0	1/1:5,10:16:36.12:1416,36,0	1/1:13,10:24:60.17:1912,60,0	1/1:9,18:28:75.25:2446,75,0	1/1:7,7:17:21.07:763,21,0	1/1:8,28:39:99:3356,99,0	1/1:4,14:19:51.17:1811,51,0	1/1:9,10:21:27.09:997,27,0	1/1:2,20:24:57.20:2237,57,0	1/1:11,19:31:90.31:3167,90,0	1/1:6,17:23:51.18:1937,51,0	1/1:1,7:8:24.08:932,24,0
chr10	77462520	.	C	CA	18664.45	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-9.846;DP=581;FS=12.195;HRun=4;HaplotypeScore=53.1674;InbreedingCoeff=0.9984;MQ=85.27;MQ0=0;MQRankSum=-6.834;QD=35.96;ReadPosRankSum=2.776;VQSLOD=4.3790;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:59.38:0,59,654	1/1:0,9:9:24.08:328,24,0	0/0:24,0:24:66.19:0,66,746	0/0:17,0:17:36.07:0,36,388	1/1:0,24:24:63.21:862,63,0	1/1:0,18:18:45.15:616,45,0	1/1:1,24:25:66.22:902,66,0	1/1:3,37:40:99:1519,111,0	1/1:0,15:15:42.14:575,42,0	1/1:4,21:25:63.21:861,63,0	1/1:2,12:14:39.11:516,39,0	1/1:1,24:25:66.69:903,67,0	1/1:0,14:14:39.13:532,39,0	1/1:1,12:13:36.12:492,36,0	1/1:1,25:26:69.23:944,69,0	1/1:1,19:20:45.15:616,45,0	1/1:1,22:23:63.21:862,63,0	1/1:1,25:26:63.21:862,63,0	1/1:4,13:17:42.10:553,42,0	1/1:0,25:25:72.20:964,72,0	1/1:1,20:21:60.20:821,60,0	1/1:1,18:19:54.18:737,54,0	1/1:3,10:13:24.08:319,24,0	1/1:0,22:22:57.19:780,57,0	1/1:1,18:19:51.17:698,51,0	1/1:3,16:19:51.17:694,51,0	1/1:3,26:29:75.02:1012,75,0	1/1:1,17:18:51.17:698,51,0
chr10	77464310	.	G	GT	290.67	PASS	AC=22;AF=0.786;AN=28;BaseQRankSum=4.846;DP=100;FS=33.832;HRun=0;HaplotypeScore=25.8706;InbreedingCoeff=0.4556;MQ=95.83;MQ0=6;MQRankSum=-2.321;QD=12.11;ReadPosRankSum=-4.387;VQSLOD=1.0680;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:39:99:0,108,1508	./.	0/0:12,0:11:26.92:0,27,335	0/0:14,0:7:21.03:0,21,256	1/1:2,0:2:3.01:41,3,0	./.	1/1:3,1:2:3.01:30,3,0	1/1:2,2:4:6.01:68,6,0	./.	./.	./.	1/1:2,0:2:3.01:38,3,0	./.	./.	1/1:0,2:2:3.01:37,3,0	1/1:2,0:2:2.99:24,3,0	./.	1/1:1,2:3:3.01:30,3,0	1/1:1,0:1:2.80:13,3,0	./.	./.	./.	./.	./.	1/1:1,0:1:3:26,3,0	1/1:0,1:1:3.01:42,3,0	1/1:2,0:2:6:54,6,0	./.
chr10	77465088	.	TA	T	3110.46	PASS	AB=0.664;AC=37;AF=0.661;AN=56;BaseQRankSum=2.594;DP=597;FS=0.000;HRun=16;HaplotypeScore=69.6192;InbreedingCoeff=-0.1845;MQ=75.21;MQ0=3;MQRankSum=-0.590;QD=6.02;ReadPosRankSum=3.893;VQSLOD=2.7108;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:34:46.41:0,46,469	1/1:0,4:6:15.84:84,16,0	0/0:45,0:25:31.14:0,31,184	0/1:24,2:20:7.41:7,0,37	0/1:15,13:32:99:144,0,134	1/1:8,23:32:4.68:243,5,0	0/1:6,15:22:9.98:163,0,10	1/1:10,7:19:12.03:120,12,0	0/1:7,7:15:66.93:67,0,69	0/1:10,13:25:7.65:162,0,8	1/1:5,13:21:7.26:134,7,0	1/1:3,11:15:25.40:149,25,0	1/1:3,11:17:27.50:155,27,0	0/1:6,7:13:29.68:67,0,30	0/1:9,15:25:62.57:165,0,63	0/1:8,8:18:66.94:67,0,67	0/1:11,17:29:81.39:92,0,81	0/1:9,16:25:28.54:180,0,29	1/1:6,14:22:47.45:262,47,0	1/1:10,17:29:22.37:230,22,0	0/1:8,3:13:11.54:45,0,12	0/1:7,3:11:20.72:21,0,50	0/1:6,4:12:36.24:59,0,36	1/1:11,9:22:41.43:230,41,0	0/1:4,8:12:4.63:87,0,5	1/1:11,17:30:9.07:224,9,0	0/1:5,9:16:25.77:77,0,26	1/1:5,3:10:9.85:47,10,0
chr10	77466691	.	GAAAA	G	50.41	PASS	AB=0.917;AC=7;AF=0.125;AN=56;BaseQRankSum=3.605;DP=458;FS=22.747;HRun=6;HaplotypeScore=187.6236;InbreedingCoeff=0.3820;MQ=31.65;MQ0=15;MQRankSum=-3.465;QD=0.99;ReadPosRankSum=1.185;VQSLOD=-0.6726;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:94.90:0,95,2460	0/0:6,0:5:12.03:0,12,135	0/0:34,0:10:24.08:0,24,598	0/0:32,0:8:24.07:0,24,527	1/1:0,7:7:3.01:48,3,0	0/0:22,0:21:48.53:0,49,581	0/0:13,1:14:25.42:0,25,465	0/0:25,0:25:70.45:0,70,957	0/0:14,0:14:42.09:0,42,468	0/0:17,0:17:29.92:0,30,467	0/0:9,0:9:12.03:0,12,147	0/0:12,0:11:33.08:0,33,358	0/0:13,0:13:39.11:0,39,464	0/0:9,0:9:11.99:0,12,126	0/0:20,0:19:48.72:0,49,592	0/0:30,0:29:64.53:0,65,803	0/0:16,1:17:5.63:0,6,434	0/1:9,0:9:20.83:21,0,164	0/0:14,0:13:36.07:0,36,617	0/0:9,0:9:21.06:0,21,274	0/1:4,1:4:21.99:22,0,27	0/0:18,0:18:51.14:0,51,579	0/0:9,0:9:23.03:0,23,223	0/1:10,1:11:1.29:1,0,79	1/1:1,17:16:6.01:75,6,0	0/0:22,0:22:55.96:0,56,692	0/0:21,0:20:51.13:0,51,779	0/0:7,0:7:15.05:0,15,185
chr10	77466706	.	AGAG	A	3487.62	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=7.847;DP=449;FS=6.414;HRun=0;HaplotypeScore=169.9244;InbreedingCoeff=0.4287;MQ=32.17;MQ0=6;MQRankSum=-8.894;QD=9.18;ReadPosRankSum=1.285;VQSLOD=2.9960;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:91.47:0,91,1825	1/1:4,3:6:10.82:59,11,0	0/0:20,0:7:20.99:0,21,333	0/0:16,0:6:14.92:0,15,278	1/1:8,0:8:7.59:36,8,0	1/1:21,1:21:40.18:236,40,0	0/1:17,0:17:92.21:92,0,115	1/1:23,0:23:11.51:280,12,0	1/1:14,0:14:28.22:188,28,0	1/1:13,0:15:33.64:272,34,0	1/1:4,6:10:10.29:49,10,0	1/1:13,0:12:12:150,12,0	1/1:12,0:13:27.73:151,28,0	1/1:2,0:11:5.97:51,6,0	1/1:21,0:20:38.15:249,38,0	1/1:21,8:28:45.75:261,46,0	1/1:21,0:20:20.17:186,20,0	1/1:4,5:10:12.65:119,13,0	1/1:13,0:13:24.21:135,24,0	1/1:14,0:14:16.76:97,17,0	1/1:4,0:5:3.23:16,3,0	0/1:20,0:18:47.17:174,0,47	0/1:9,0:10:56.34:56,0,103	1/1:9,0:12:19.98:102,20,0	0/1:19,0:15:9.96:10,0,27	1/1:24,0:24:41.87:262,42,0	1/1:20,1:20:33.52:209,34,0	1/1:7,0:7:7.50:46,8,0
chr10	77466728	.	G	GA	1069.42	PASS	AB=0.914;AC=9;AF=0.161;AN=56;BaseQRankSum=1.587;DP=533;FS=8.195;HRun=2;HaplotypeScore=179.6471;InbreedingCoeff=0.0243;MQ=38.25;MQ0=16;MQRankSum=-3.962;QD=6.81;ReadPosRankSum=-1.400;VQSLOD=-0.1940;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:84.54:0,85,1233	0/0:8,0:7:14.63:0,15,158	0/0:9,0:4:3.01:0,3,37	0/0:5,0:3:6.02:0,6,74	0/0:15,0:15:21.05:0,21,233	0/0:28,0:25:52.87:0,53,605	0/0:17,0:17:38.86:0,39,454	0/1:45,2:43:99:205,0,1055	0/1:14,0:13:99:171,0,131	0/0:21,0:21:44.41:0,44,547	0/0:13,0:13:13.58:0,14,141	0/1:13,3:15:99:217,0,167	0/1:12,0:11:99:104,0,168	0/0:15,0:15:15.05:0,15,182	0/0:22,0:21:51.04:0,51,592	0/0:31,0:30:60.05:0,60,706	0/0:29,0:28:4:0,4,630	0/0:16,0:16:29.24:0,29,308	0/1:27,0:24:6.21:6,0,710	0/0:15,0:15:24.08:0,24,299	0/0:9,0:9:21.06:0,21,255	0/1:17,3:18:99:144,0,230	0/1:5,3:8:84.47:158,0,84	1/1:9,4:13:11.82:205,12,0	0/0:22,0:18:18.19:0,18,275	0/0:22,0:22:50.81:0,51,617	0/0:24,0:23:54.17:0,54,662	0/0:16,0:15:33.06:0,33,380
chr10	77466772	.	AGACGAC	A	15427.08	PASS	AB=0.633;AC=49;AF=0.875;AN=56;BaseQRankSum=5.521;DP=626;FS=7.220;HRun=0;HaplotypeScore=182.2505;InbreedingCoeff=0.8112;MQ=47.89;MQ0=22;MQRankSum=-0.215;QD=28.57;ReadPosRankSum=2.496;VQSLOD=3.8119;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,99,2633	1/1:13,0:12:30.07:431,30,0	0/0:27,0:3:9.03:0,9,211	0/0:19,0:3:5.93:0,6,85	1/1:21,0:21:53.85:604,54,0	1/1:24,0:24:50.10:669,50,0	1/1:16,0:16:30.04:390,30,0	1/1:18,0:15:16.69:321,17,0	1/1:16,0:15:40.07:514,40,0	1/1:7,15:22:40.88:610,41,0	1/1:14,0:14:29.68:414,30,0	1/1:18,0:18:52.60:661,53,0	1/1:19,0:18:42.50:646,43,0	1/1:20,0:20:39.11:583,39,0	1/1:24,0:24:54.16:841,54,0	1/1:32,0:32:63.14:899,63,0	1/1:36,0:35:84.22:1241,84,0	1/1:21,0:21:51.11:762,51,0	1/1:16,15:31:44.86:548,45,0	1/1:5,15:20:39:464,39,0	1/1:20,0:20:54.03:715,54,0	1/1:18,0:18:38.97:558,39,0	1/1:15,0:15:41.85:502,42,0	1/1:19,0:19:42.05:589,42,0	1/1:28,0:25:32.91:652,33,0	0/1:13,18:31:4.49:554,0,4	1/1:24,0:23:42.06:564,42,0	1/1:20,0:20:44.25:694,44,0
chr10	77466774	.	ACG	A	1435.77	PASS	AB=0.949;AC=26;AF=0.464;AN=56;BaseQRankSum=1.033;DP=623;FS=16.461;HRun=0;HaplotypeScore=187.0163;InbreedingCoeff=-0.5599;MQ=48.41;MQ0=21;MQRankSum=7.756;QD=2.78;ReadPosRankSum=2.941;VQSLOD=1.8158;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,2055	0/1:12,0:11:22.71:37,0,23	0/0:28,0:4:9.03:0,9,182	0/0:20,0:4:12.04:0,12,181	0/1:19,2:21:1.60:65,0,2	0/1:20,2:22:42.11:51,0,42	1/1:15,0:15:2.07:35,2,0	0/1:18,0:16:33.95:34,0,158	0/1:15,2:16:36.89:64,0,37	0/1:21,1:22:30.98:68,0,31	0/1:12,2:14:20.76:37,0,21	0/1:18,1:19:51.15:51,0,66	0/1:18,1:18:62.68:71,0,63	0/1:19,1:20:8.23:48,0,8	1/1:23,0:23:20.55:155,21,0	0/1:29,4:33:23.01:112,0,23	0/1:33,2:34:10.13:137,0,10	0/1:21,0:21:24.99:74,0,25	0/1:31,0:31:13.45:13,0,383	0/0:19,0:19:10.55:0,11,56	0/1:19,1:20:13.24:85,0,13	0/1:16,2:18:31.76:52,0,32	0/1:15,0:15:28.54:29,0,47	0/1:18,1:19:14.01:81,0,14	0/1:28,0:25:60.91:123,0,61	0/1:30,0:30:23.20:23,0,209	0/1:24,1:24:49.04:49,0,110	0/1:17,3:20:11.09:100,0,11
chr10	77467466	.	C	CG	11330.59	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-3.821;DP=551;FS=9.137;HRun=1;HaplotypeScore=69.9402;InbreedingCoeff=0.9769;MQ=70.92;MQ0=0;MQRankSum=-2.475;QD=24.96;ReadPosRankSum=1.850;VQSLOD=3.9691;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:52.79:0,53,592	1/1:0,6:5:12.04:175,12,0	0/0:16,0:10:23.56:0,24,186	0/0:13,0:8:11.50:0,11,119	0/0:20,0:20:53.67:0,54,562	1/1:3,15:18:38.15:510,38,0	1/1:3,6:9:24.94:314,25,0	1/1:6,34:42:99:1107,107,0	1/1:13,2:15:28.65:184,29,0	1/1:3,19:22:56.38:668,56,0	1/1:4,18:22:40.20:490,40,0	1/1:18,0:18:36.15:197,36,0	1/1:17,1:18:21.71:181,22,0	1/1:0,11:11:21.07:307,21,0	1/1:4,16:20:41.16:559,41,0	1/1:9,17:26:73.23:917,73,0	1/1:9,19:27:76.44:959,76,0	1/1:2,24:26:54.18:770,54,0	1/1:6,15:21:44.74:505,45,0	1/1:4,19:23:59.37:697,59,0	1/1:2,21:23:34.36:478,34,0	1/1:14,2:16:27.25:193,27,0	1/1:23,0:23:14.81:158,15,0	1/1:10,0:10:21.83:125,22,0	0/0:20,0:20:57.09:0,57,647	1/1:2,19:22:57.14:682,57,0	1/1:7,14:21:52.69:693,53,0	1/1:3,11:14:33.11:461,33,0
chr10	77467467	.	G	GGT	7521.09	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=-2.789;DP=556;FS=1.375;HRun=0;HaplotypeScore=95.1647;InbreedingCoeff=0.6436;MQ=71.06;MQ0=0;MQRankSum=-0.496;QD=16.75;ReadPosRankSum=0.822;VQSLOD=5.0155;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:30:58.36:0,58,715	1/1:6,0:5:11.98:98,12,0	0/0:18,0:10:23.57:0,24,194	0/0:17,0:9:14.37:0,14,139	0/0:18,0:22:40.66:0,41,638	1/1:16,2:18:36.44:364,36,0	1/1:9,0:9:21.75:193,22,0	1/1:39,0:40:97.50:839,97,0	0/1:15,0:17:4.37:91,0,4	1/1:20,0:21:55.03:445,55,0	1/1:18,1:19:37.28:357,37,0	1/1:18,0:18:11.02:135,11,0	0/1:17,0:18:13.92:92,0,14	1/1:13,0:13:20.97:174,21,0	1/1:18,1:19:40.53:352,41,0	1/1:24,2:26:69.89:631,70,0	1/1:29,1:29:69.64:628,70,0	1/1:26,1:27:40.31:467,40,0	1/1:17,0:17:39.07:332,39,0	1/1:22,2:24:53.63:507,54,0	1/1:21,1:22:31.40:303,31,0	0/1:14,0:16:3.11:87,0,3	0/1:22,0:23:33.32:79,0,33	1/1:10,0:10:9.39:90,9,0	0/0:18,0:20:57.07:0,57,788	1/1:21,0:21:40.58:439,41,0	1/1:18,1:19:52.91:492,53,0	1/1:12,2:14:19.35:325,19,0
chr10	77467714	.	AT	A	10680.73	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=8.630;DP=599;FS=2.950;HRun=10;HaplotypeScore=129.1624;InbreedingCoeff=0.8927;MQ=71.51;MQ0=0;MQRankSum=-1.027;QD=21.15;ReadPosRankSum=1.819;VQSLOD=3.8671;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,99,1091	1/1:3,6:9:14.99:130,15,0	0/0:15,1:14:3.72:0,4,262	0/0:16,0:15:3.26:0,3,200	0/0:20,0:20:39.57:0,40,422	1/1:4,16:20:41.96:364,42,0	1/1:1,15:16:44.99:389,45,0	1/1:4,32:36:95.92:824,96,0	1/1:0,16:17:47.03:397,47,0	1/1:2,19:21:59.45:502,59,0	1/1:1,18:19:47.97:416,48,0	1/1:1,28:29:74.97:651,75,0	1/1:3,14:17:41.99:365,42,0	1/1:1,17:18:44.98:390,45,0	1/1:2,26:28:65.95:572,66,0	1/1:1,18:19:50.98:442,51,0	1/1:0,19:19:50.98:443,51,0	1/1:4,14:18:14.09:308,14,0	1/1:6,16:23:52.34:428,52,0	1/1:4,28:32:83.98:728,84,0	1/1:7,23:30:59.95:520,60,0	1/1:1,15:16:44.99:391,45,0	1/1:3,17:20:44.99:391,45,0	1/1:0,11:11:29.99:260,30,0	1/1:21,0:21:33.31:158,33,0	1/1:1,25:26:74.98:651,75,0	1/1:1,31:32:86.96:755,87,0	1/1:0,8:8:24:207,24,0
chr10	77468193	.	C	CTTTT	10723.20	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=0.773;DP=602;FS=4.917;HRun=12;HaplotypeScore=125.4093;InbreedingCoeff=0.8849;MQ=68.85;MQ0=0;MQRankSum=-4.325;QD=20.19;ReadPosRankSum=-3.150;VQSLOD=2.6366;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:38:63.60:0,64,983	1/1:2,1:11:18.02:236,18,0	0/0:15,0:15:5.96:0,6,132	0/0:16,0:14:9.49:0,9,230	1/1:25,0:31:68.77:742,69,0	1/1:5,0:22:33.02:418,33,0	1/1:8,2:26:43.08:583,43,0	1/1:14,0:28:42.76:479,43,0	1/1:3,6:13:24.08:493,24,0	1/1:7,1:25:47.92:479,48,0	1/1:4,0:15:24.44:301,24,0	1/1:10,0:20:15.88:276,16,0	1/1:12,12:25:21:368,21,0	1/1:4,0:17:14.96:199,15,0	1/1:3,0:16:20.93:210,21,0	1/1:1,0:13:23.99:277,24,0	1/1:2,0:18:19.87:227,20,0	1/1:7,2:22:32.97:454,33,0	1/1:16,1:25:52.02:559,52,0	1/1:4,2:29:61.31:762,61,0	1/1:6,0:23:41.82:461,42,0	1/1:8,15:24:41.97:657,42,0	1/1:6,20:28:34.57:556,35,0	1/1:5,16:25:28.96:584,29,0	1/1:11,0:18:51.09:646,51,0	1/1:11,0:24:28.76:312,29,0	1/1:6,0:24:32.85:364,33,0	1/1:8,0:8:6:80,6,0
chr10	77468280	.	C	CA	1092.43	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.040;DP=454;FS=4.009;HRun=1;HaplotypeScore=50.5944;InbreedingCoeff=0.9834;MQ=58.60;MQ0=3;MQRankSum=1.065;QD=35.24;ReadPosRankSum=-1.281;VQSLOD=3.0690;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.21:0,72,916	0/0:6,0:6:18.06:0,18,234	0/0:14,0:9:27.09:0,27,350	0/0:19,0:14:42.14:0,42,543	1/1:0,19:19:51.17:764,51,0	0/0:9,0:9:21.07:0,21,273	0/0:21,0:21:48.16:0,48,622	0/0:14,0:14:36.12:0,36,468	0/0:10,0:10:27.09:0,27,351	0/0:14,0:14:33.11:0,33,429	0/0:10,0:10:21.07:0,21,272	0/0:15,0:15:42.14:0,42,544	0/0:20,0:20:48.16:0,48,623	0/0:17,0:17:45.15:0,45,584	0/0:27,0:27:75.24:0,75,973	0/0:12,0:12:36.12:0,36,467	0/0:26,1:27:27.39:0,27,851	0/0:23,0:23:64.76:0,65,822	0/0:9,0:9:27.09:0,27,348	0/0:15,0:15:39.13:0,39,506	0/0:27,0:27:75.22:0,75,956	0/0:9,0:9:27.09:0,27,350	0/0:9,0:9:24.08:0,24,310	0/0:27,0:27:54.17:0,54,701	1/1:0,12:12:30.10:450,30,0	0/0:11,0:11:33.11:0,33,429	0/0:23,0:23:60.20:0,60,779	0/0:10,0:10:18.05:0,18,233
chr10	77468745	.	GT	G	222.31	PASS	AB=0.604;AC=4;AF=0.071;AN=56;BaseQRankSum=1.635;DP=578;FS=1.035;HRun=9;HaplotypeScore=108.6569;InbreedingCoeff=0.3867;MQ=73.14;MQ0=7;MQRankSum=-0.612;QD=3.27;ReadPosRankSum=1.762;VQSLOD=0.0499;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:83.24:0,83,883	0/0:9,0:9:7.31:0,7,50	0/0:28,0:17:20.62:0,21,181	0/0:27,0:14:17.50:0,18,161	0/1:7,21:27:1.96:252,0,2	0/0:17,0:16:0:0,0,0	0/0:19,0:19:36.23:0,36,415	0/0:21,0:20:26.08:0,26,287	0/0:16,0:16:21.04:0,21,226	0/0:22,0:22:31.37:0,31,366	0/0:10,0:10:12.80:0,13,136	0/0:17,0:17:15.04:0,15,171	0/0:23,0:23:28.80:0,29,267	0/0:16,0:16:42.07:0,42,461	1/1:19,0:19:1.16:3,1,0	0/0:17,0:17:36.02:0,36,392	0/0:23,0:23:52.37:0,52,575	0/0:28,0:28:5.48:0,5,83	0/0:17,0:14:24.05:0,24,264	0/0:16,0:16:37.16:0,37,362	0/0:17,0:17:45.09:0,45,497	0/0:22,0:22:51.11:0,51,563	0/0:19,0:19:30.55:0,31,335	0/0:28,0:28:30:0,30,293	0/1:9,12:21:57.99:58,0,66	0/0:26,0:26:54.66:0,55,553	0/0:22,0:22:9.02:0,9,95	0/0:13,0:13:23.82:0,24,295
chr10	77468748	.	TTTTTTTG	T	4022.40	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-4.784;DP=587;FS=12.163;HRun=0;HaplotypeScore=137.3422;InbreedingCoeff=0.3771;MQ=69.44;MQ0=8;MQRankSum=-0.463;QD=9.81;ReadPosRankSum=1.559;VQSLOD=2.1243;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,105,2641	1/1:9,0:9:5.83:82,6,0	0/1:26,0:15:18.10:18,0,61	0/1:27,0:13:11.05:11,0,75	0/1:30,0:29:7.07:7,0,578	1/1:18,0:17:2.96:19,3,0	1/1:19,1:20:29.06:288,29,0	0/1:17,0:16:7.80:176,0,8	0/0:19,0:19:15.03:0,15,326	1/1:4,19:23:47.85:482,48,0	1/1:3,6:9:14.92:187,15,0	0/0:19,0:19:8.79:0,9,197	0/0:23,0:23:27.09:0,27,577	1/1:15,0:15:26.66:223,27,0	1/1:2,18:20:2.68:68,3,0	1/1:17,0:17:37.27:271,37,0	1/1:22,0:22:43.46:309,43,0	1/1:5,23:28:8.99:157,9,0	0/1:17,0:13:5.97:159,0,6	1/1:16,0:16:35.64:310,36,0	1/1:17,0:17:30.89:320,31,0	0/0:20,0:20:2.40:0,2,735	0/1:19,0:19:10.36:10,0,233	0/0:31,0:31:29.32:0,29,718	0/1:23,0:23:16.56:17,0,561	1/1:24,0:24:53.94:558,54,0	0/0:25,0:25:2.64:0,3,28	1/1:11,2:13:30.03:349,30,0
chr10	77468755	.	G	GT	1900.98	PASS	AB=0.994;AC=36;AF=0.643;AN=56;BaseQRankSum=-0.047;DP=614;FS=3.071;HRun=9;HaplotypeScore=114.0368;InbreedingCoeff=0.2928;MQ=64.57;MQ0=9;MQRankSum=1.406;QD=4.17;ReadPosRankSum=-3.258;VQSLOD=0.2481;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:82.95:0,83,913	0/0:4,0:11:1.24:0,1,5	0/1:24,0:12:28.24:34,0,28	0/0:28,0:13:2.72:0,3,88	1/1:31,1:31:7.80:40,8,0	0/1:17,0:16:0:0,0,0	1/1:19,0:19:1.59:11,2,0	1/1:19,0:17:1.73:26,2,0	1/1:3,16:19:21.06:243,21,0	1/1:22,0:23:8.90:67,9,0	0/0:8,0:9:2.83:0,3,7	1/1:4,16:20:3.88:72,4,0	1/1:3,19:22:23.87:269,24,0	0/1:18,0:18:15.59:16,0,16	0/0:18,0:18:2.04:0,2,6	0/1:24,0:24:4.91:15,0,5	1/1:26,0:26:4.87:31,5,0	0/0:25,0:25:4.07:0,4,13	1/1:15,0:11:4.33:45,4,0	0/1:17,0:18:1.53:4,0,2	1/1:24,0:24:4.09:48,4,0	1/1:14,6:20:46.15:573,46,0	1/1:5,14:19:18.05:207,18,0	1/1:7,24:31:23.31:255,23,0	1/1:23,0:23:3.21:9,3,0	1/1:23,0:23:2.62:58,3,0	0/0:24,0:24:0.68:0,1,1	0/1:18,0:18:2.06:21,0,2
chr10	77468756	.	TTTTTTG	T	4846.01	PASS	AB=0.993;AC=37;AF=0.661;AN=56;BaseQRankSum=-4.170;DP=617;FS=3.046;HRun=0;HaplotypeScore=134.1961;InbreedingCoeff=0.3742;MQ=64.40;MQ0=9;MQRankSum=-1.726;QD=10.63;ReadPosRankSum=-3.900;VQSLOD=2.4898;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,110,2315	1/1:11,0:11:8.35:85,8,0	0/1:25,0:12:17.11:17,0,58	0/1:30,0:13:12.41:12,0,64	0/1:32,0:31:14.65:15,0,458	1/1:1,16:16:3.01:42,3,0	1/1:18,0:18:47.21:400,47,0	0/1:19,1:18:4.98:216,0,5	0/0:20,0:20:7.75:0,8,319	1/1:22,0:22:47.76:438,48,0	1/1:8,0:8:13.77:150,14,0	0/0:20,0:20:8.76:0,9,156	0/0:22,0:22:27.07:0,27,481	1/1:18,0:18:33.26:267,33,0	1/1:18,0:18:2.73:53,3,0	1/1:24,0:24:63:445,63,0	1/1:26,0:26:65.49:567,65,0	1/1:25,1:26:8.99:126,9,0	1/1:17,0:13:12.47:219,12,0	1/1:19,0:19:48.34:406,48,0	1/1:23,0:23:37.05:382,37,0	0/1:19,0:19:4.85:5,0,594	0/1:18,0:18:11.58:12,0,184	0/0:31,0:31:34.86:0,35,606	0/1:23,0:23:19.57:20,0,437	1/1:22,1:23:64.38:601,64,0	0/0:24,0:24:2.47:0,2,14	1/1:18,0:18:36.46:368,36,0
chr10	77468760	.	TTG	T	4134.30	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-2.121;DP=619;FS=0.400;HRun=0;HaplotypeScore=105.7505;InbreedingCoeff=0.0442;MQ=66.17;MQ0=9;MQRankSum=-1.051;QD=8.35;ReadPosRankSum=-2.768;VQSLOD=2.7836;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:28.42:0,28,887	1/1:10,0:10:8.74:58,9,0	0/0:30,0:13:4.37:0,4,66	0/1:35,0:17:11.67:12,0,64	1/1:32,0:31:17.18:189,17,0	0/1:18,0:17:7.05:7,0,8	1/1:21,0:21:51.67:390,52,0	0/1:18,0:16:10.60:189,0,11	0/0:19,0:19:6.12:0,6,49	1/1:22,0:22:15.87:325,16,0	0/1:9,0:9:14.48:75,0,14	0/1:17,0:17:10:10,0,13	0/1:23,0:23:23.59:24,0,60	1/1:16,0:16:27.11:250,27,0	1/1:18,0:18:2.99:27,3,0	1/1:24,0:24:20.50:320,20,0	1/1:27,0:27:67.99:531,68,0	1/1:27,0:27:8.97:76,9,0	0/1:18,0:14:14.95:174,0,15	1/1:20,0:20:31.94:316,32,0	0/1:21,0:21:27.99:273,0,28	0/1:20,0:20:60.72:61,0,78	0/1:16,0:16:24.14:24,0,41	0/0:30,0:30:7.95:0,8,94	0/1:20,0:20:21.80:80,0,22	1/1:24,0:24:16.14:436,16,0	1/1:0,22:22:2.79:37,3,0	1/1:17,0:17:5.96:253,6,0
chr10	77469191	.	CACACACACACACACACAA	C	2057.46	PASS	AB=1.000;AC=29;AF=0.630;AN=46;BaseQRankSum=0.779;DP=340;FS=11.440;HRun=0;HaplotypeScore=121.5409;InbreedingCoeff=0.2834;MQ=35.69;MQ0=37;MQRankSum=-4.300;QD=11.49;ReadPosRankSum=-0.720;VQSLOD=1.7642;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:44:8.96:0,9,3489	1/1:4,1:5:11.71:387,12,0	./.	./.	0/1:10,0:9:14.94:15,0,299	1/1:15,0:11:8.99:235,9,0	0/0:19,0:16:0.47:0,0,1	1/1:12,0:8:9.74:59,10,0	1/1:16,1:14:11.49:258,11,0	0/1:12,0:8:1.70:35,0,2	1/1:4,2:4:0.47:1,0,0	0/0:23,0:22:3.01:0,3,31	0/1:11,0:10:96.91:229,0,97	1/1:14,1:14:1.82:87,2,0	1/1:7,1:8:6.02:185,6,0	0/1:12,0:10:7.23:45,0,7	./.	1/1:8,0:7:15.12:97,15,0	1/1:6,0:4:5.90:37,6,0	./.	0/0:15,0:10:0.89:0,1,2	0/0:15,0:14:2.88:0,3,15	./.	0/1:14,0:11:0:0,0,0	0/0:9,0:8:3.01:0,3,144	1/1:14,0:9:15.25:188,15,0	1/1:13,0:12:8.63:311,9,0	1/1:1,0:1:2.96:19,3,0
chr10	77469193	.	CACACACACACACACAA	C	2683.73	PASS	AB=1.000;AC=34;AF=0.739;AN=46;BaseQRankSum=1.079;DP=337;FS=10.079;HRun=0;HaplotypeScore=113.0230;InbreedingCoeff=0.2507;MQ=36.07;MQ0=38;MQRankSum=-5.534;QD=11.28;ReadPosRankSum=-1.381;VQSLOD=1.5434;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:48,0:44:13.58:14,0,2914	1/1:3,2:5:12.04:436,12,0	./.	./.	0/1:10,0:9:14.94:15,0,247	1/1:13,2:11:9.03:287,9,0	0/0:5,14:16:0.47:0,0,1	1/1:11,0:8:14.78:95,15,0	1/1:15,1:13:11.82:286,12,0	1/1:10,0:7:13.54:68,14,0	1/1:6,0:4:0.47:1,0,0	0/0:23,0:22:0.88:0,1,2	0/1:10,0:9:30.85:330,0,31	1/1:5,11:15:5.87:150,6,0	1/1:6,2:8:6.02:187,6,0	1/1:11,1:10:8.23:138,8,0	./.	1/1:8,0:7:18.99:118,19,0	1/1:5,0:4:5.90:37,6,0	./.	0/0:14,0:9:0.89:0,1,2	1/1:15,0:14:1.25:3,1,0	./.	0/1:14,0:11:0:0,0,0	0/0:9,0:8:3.01:0,3,118	1/1:12,1:9:17.72:221,18,0	1/1:2,13:14:8.85:393,9,0	1/1:1,0:1:2.96:19,3,0
chr10	77469195	.	CACACACACACACAA	C	2700.46	PASS	AB=0.978;AC=37;AF=0.804;AN=46;BaseQRankSum=0.513;DP=344;FS=9.838;HRun=0;HaplotypeScore=109.1912;InbreedingCoeff=0.2452;MQ=36.08;MQ0=39;MQRankSum=-5.970;QD=10.27;ReadPosRankSum=-1.523;VQSLOD=1.3988;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:48,0:45:35.78:36,0,2348	1/1:5,0:5:12.04:379,12,0	./.	./.	0/1:10,0:9:14.94:15,0,195	1/1:15,1:12:11.90:246,12,0	0/0:19,0:16:0.47:0,0,1	1/1:11,0:8:14.78:95,15,0	1/1:16,0:13:11.81:315,12,0	1/1:10,0:7:13.54:68,14,0	1/1:6,0:4:0.47:1,0,0	1/1:22,0:21:2.94:18,3,0	1/1:10,2:10:5.79:465,6,0	1/1:15,1:15:5.89:134,6,0	1/1:8,0:8:6.02:149,6,0	1/1:12,0:10:8.23:140,8,0	./.	1/1:9,0:8:19.56:119,20,0	1/1:4,0:3:5.90:37,6,0	./.	0/0:15,0:10:0.89:0,1,2	1/1:15,0:14:2.98:21,3,0	./.	0/1:13,1:11:0:0,0,0	0/0:9,0:8:2.48:0,2,91	1/1:13,0:9:17.72:205,18,0	1/1:15,0:14:8.60:346,9,0	1/1:1,0:1:2.96:19,3,0
chr10	77469197	.	CACACACACACAA	C	2790.42	PASS	AB=1.000;AC=42;AF=0.875;AN=48;BaseQRankSum=0.766;DP=352;FS=7.894;HRun=0;HaplotypeScore=107.4322;InbreedingCoeff=0.0678;MQ=36.60;MQ0=39;MQRankSum=-5.739;QD=9.43;ReadPosRankSum=-1.740;VQSLOD=1.0733;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:48,0:45:36.66:37,0,1786	1/1:5,0:5:12.04:325,12,0	./.	./.	0/1:10,0:9:14.94:15,0,143	1/1:16,0:12:11.90:212,12,0	0/0:19,0:16:0.47:0,0,1	1/1:10,0:8:17.74:115,18,0	1/1:13,3:13:11.47:318,11,0	1/1:10,0:7:13.54:69,14,0	1/1:6,0:4:0.47:1,0,0	1/1:20,3:22:5.62:29,6,0	1/1:10,2:10:23.81:578,24,0	1/1:16,0:15:5.78:115,6,0	1/1:7,1:8:6.02:113,6,0	1/1:12,0:10:8.26:141,8,0	1/1:5,0:5:2.99:23,3,0	1/1:10,0:9:22.77:144,23,0	1/1:4,0:3:5.90:37,6,0	./.	1/1:16,0:11:1.58:22,2,0	1/1:1,14:14:3.01:38,3,0	./.	0/1:15,0:12:0:0,0,0	0/1:9,0:8:40.90:41,0,57	1/1:14,0:10:20.72:215,21,0	1/1:15,0:14:8.77:290,9,0	1/1:1,0:1:2.96:19,3,0
chr10	77469199	.	CACACACACAA	C	2630.16	PASS	AB=1.000;AC=43;AF=0.896;AN=48;BaseQRankSum=0.160;DP=362;FS=4.656;HRun=0;HaplotypeScore=109.2521;InbreedingCoeff=0.0184;MQ=36.81;MQ0=38;MQRankSum=-4.496;QD=8.60;ReadPosRankSum=-2.586;VQSLOD=1.5247;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:48,0:45:64.85:65,0,1236	1/1:5,0:5:12.04:274,12,0	./.	./.	0/1:10,0:9:14.95:15,0,90	1/1:16,0:12:11.90:181,12,0	0/0:19,0:16:0.47:0,0,1	1/1:10,0:8:17.74:115,18,0	1/1:17,0:14:14.58:296,15,0	1/1:10,0:7:13.54:69,14,0	1/1:6,0:4:0.47:1,0,0	1/1:23,0:22:5.29:28,5,0	1/1:13,0:11:26.77:552,27,0	1/1:15,0:15:5.61:97,6,0	1/1:8,1:9:6.02:80,6,0	1/1:15,0:13:11.49:178,11,0	1/1:7,0:7:2.99:23,3,0	1/1:10,0:9:23.23:146,23,0	1/1:5,0:4:8.87:58,9,0	./.	1/1:17,0:12:1.54:22,2,0	1/1:14,0:14:2.94:18,3,0	./.	1/1:16,0:13:2.99:24,3,0	0/1:9,0:8:30.66:41,0,31	1/1:14,0:10:20.72:197,21,0	1/1:14,1:14:8.74:238,9,0	1/1:1,0:1:2.96:19,3,0
chr10	77469932	.	ATG	A	15290.19	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-7.651;DP=686;FS=9.788;HRun=0;HaplotypeScore=142.5356;InbreedingCoeff=0.9748;MQ=76.44;MQ0=0;MQRankSum=-1.401;QD=38.71;ReadPosRankSum=2.416;VQSLOD=5.9107;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,2499	1/1:1,7:8:24.08:344,24,0	0/0:14,0:14:42.13:0,42,717	0/0:22,0:22:56.64:0,57,923	0/0:24,0:24:66.21:0,66,1163	1/1:1,24:25:69.23:988,69,0	1/1:2,23:25:57.19:817,57,0	1/1:2,26:28:81.27:1159,81,0	0/0:24,0:24:66.23:0,66,1197	1/1:1,25:26:75.24:1055,75,0	1/1:0,16:16:42.10:578,42,0	0/0:46,0:46:99:0,117,2110	0/0:27,0:27:75.22:0,75,1285	1/1:1,23:24:66.22:944,66,0	1/1:2,24:26:75.25:1074,75,0	1/1:1,38:39:99:1503,105,0	1/1:1,29:30:81.27:1161,81,0	1/1:1,16:17:48.16:688,48,0	1/1:0,12:12:33.07:450,33,0	1/1:1,16:17:45.03:577,45,0	1/1:4,43:47:99:1719,120,0	0/0:19,0:19:51.17:0,51,922	0/0:14,0:14:39.13:0,39,712	0/0:30,0:30:72.23:0,72,1289	0/0:24,0:24:63.22:0,63,1155	1/1:1,28:29:84.28:1203,84,0	1/1:1,23:24:69.23:988,69,0	1/1:1,1:2:3.01:43,3,0
chr10	77470069	.	T	TGCCGCCG	47002.36	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=7.540;DP=599;FS=1.354;HRun=0;HaplotypeScore=157.9302;InbreedingCoeff=0.9915;MQ=84.17;MQ0=0;MQRankSum=-13.817;QD=94.00;ReadPosRankSum=4.078;VQSLOD=6.1000;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,3388	1/1:1,8:9:27.09:1081,27,0	0/0:24,0:25:66.23:0,66,1774	0/0:30,0:30:47.78:0,48,2126	1/1:3,0:28:51.06:1733,51,0	1/1:5,17:23:63.20:2457,63,0	1/1:3,12:19:42.14:1700,42,0	1/1:7,9:20:48.10:1567,48,0	1/1:3,0:15:36.12:1276,36,0	1/1:10,14:24:72.24:2622,72,0	1/1:5,9:14:30.08:968,30,0	1/1:9,0:34:96.28:3209,96,0	1/1:4,0:20:54.10:1909,54,0	1/1:3,21:24:72.25:2999,72,0	1/1:9,23:32:96.32:3688,96,0	1/1:4,27:31:93.32:3693,93,0	1/1:6,8:14:33.07:1054,33,0	1/1:0,6:7:18.06:753,18,0	1/1:11,8:19:48.15:1705,48,0	1/1:6,9:16:48.14:1746,48,0	1/1:7,8:17:17.69:750,18,0	1/1:7,0:25:48.10:1641,48,0	1/1:6,0:19:38.92:1261,39,0	1/1:3,0:11:27.09:948,27,0	1/1:5,0:20:51.17:1749,51,0	1/1:6,22:30:84.29:3266,84,0	1/1:6,14:22:60.21:2500,60,0	1/1:3,4:7:21.07:729,21,0
chr10	77470166	.	CT	C	10191.41	PASS	AB=1.000;AC=55;AF=0.982;AN=56;BaseQRankSum=4.358;DP=598;FS=1.097;HRun=1;HaplotypeScore=218.8470;InbreedingCoeff=-0.0212;MQ=67.50;MQ0=0;MQRankSum=-3.205;QD=17.04;ReadPosRankSum=6.469;VQSLOD=4.9044;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,32:37:72.73:641,73,0	1/1:0,13:13:38.30:251,38,0	1/1:19,0:19:31.40:169,31,0	0/1:17,0:17:16.16:90,0,16	1/1:0,26:26:67.92:454,68,0	1/1:5,14:19:31:311,31,0	1/1:2,22:24:50.68:420,51,0	1/1:2,17:19:53.12:353,53,0	1/1:0,15:15:44.42:313,44,0	1/1:4,24:28:33.98:394,34,0	1/1:2,12:14:7.04:174,7,0	1/1:5,21:26:53.86:476,54,0	1/1:1,15:16:44.96:311,45,0	1/1:0,14:14:41.28:283,41,0	1/1:4,23:27:76.69:514,77,0	1/1:3,16:19:55.97:372,56,0	1/1:4,29:32:91.51:606,92,0	1/1:0,11:11:32.69:235,33,0	1/1:4,20:23:38.76:376,39,0	1/1:2,24:26:66.78:459,67,0	1/1:2,21:23:50.07:329,50,0	1/1:0,21:21:62.05:418,62,0	1/1:0,22:22:64.99:437,65,0	1/1:3,19:22:44.46:314,44,0	1/1:0,20:20:58.78:378,59,0	1/1:1,24:25:73.18:469,73,0	1/1:5,25:30:63.48:526,63,0	1/1:2,5:7:17.75:119,18,0
chr10	77472028	.	CCTT	C	7228.71	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=11.310;DP=341;FS=1.001;HRun=0;HaplotypeScore=60.8677;InbreedingCoeff=0.8951;MQ=66.43;MQ0=11;MQRankSum=-6.664;QD=37.07;ReadPosRankSum=3.459;VQSLOD=5.5210;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.23:0,72,1524	1/1:0,4:3:6.02:86,6,0	0/0:18,0:10:19.75:0,20,254	0/0:17,0:4:8.94:0,9,110	0/0:17,0:17:47.40:0,47,975	1/1:0,16:15:33.11:548,33,0	1/1:1,6:7:2.87:50,3,0	1/1:4,15:17:36.09:568,36,0	0/0:6,0:6:12.04:0,12,261	1/1:1,13:14:36.11:574,36,0	1/1:0,8:8:24.08:385,24,0	0/0:12,0:12:36.11:0,36,740	0/0:7,0:7:21.05:0,21,418	1/1:1,2:3:6.02:100,6,0	1/1:1,9:10:24.08:398,24,0	1/1:1,7:8:18.06:299,18,0	1/1:1,17:17:42.14:698,42,0	1/1:0,16:16:39.13:649,39,0	1/1:1,10:9:24.06:371,24,0	1/1:1,13:13:36.09:569,36,0	1/1:0,1:1:3.01:50,3,0	0/0:3,0:3:8.95:0,9,148	0/0:11,0:11:33.03:0,33,660	0/0:8,0:8:21.07:0,21,459	0/0:20,0:20:60.11:0,60,1223	1/1:1,18:18:51.06:736,51,0	1/1:0,17:17:45.15:748,45,0	1/1:2,8:10:24.08:399,24,0
chr10	77473997	.	T	TTTTCTGGTC	47041.71	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-7.185;DP=754;FS=8.808;HRun=0;HaplotypeScore=191.8290;InbreedingCoeff=0.9631;MQ=66.93;MQ0=0;MQRankSum=-20.104;QD=106.19;ReadPosRankSum=-1.210;VQSLOD=4.7516;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:61:99:0,187,5447	1/1:7,9:19:45.15:1918,45,0	0/0:21,0:21:59.77:0,60,1601	0/0:14,0:14:6.84:0,7,681	0/0:22,0:22:63.22:0,63,1863	1/1:5,17:27:60.20:2829,60,0	1/1:9,17:30:72.20:3112,72,0	1/1:24,14:42:99:4641,120,0	0/0:29,0:29:87.30:0,87,2528	1/1:4,12:23:69.16:2452,69,0	1/1:7,10:17:42.06:1451,42,0	0/0:41,0:41:99:0,120,3309	0/0:25,0:25:75.24:0,75,2038	1/1:12,21:35:3.23:3876,3,0	1/1:5,26:33:90.31:3998,90,0	1/1:10,21:33:90.31:4135,90,0	1/1:8,19:31:66.23:3018,66,0	1/1:8,8:19:42.14:1913,42,0	1/1:10,6:17:48.16:1907,48,0	1/1:8,14:27:66.09:2370,66,0	1/1:10,7:24:36.12:1576,36,0	0/0:26,0:26:72.22:0,72,1953	0/0:15,0:15:45.15:0,45,1289	0/0:26,0:26:78.26:0,78,2217	0/0:30,0:30:84.28:0,84,2325	1/1:7,18:27:72.23:3159,72,0	1/1:12,13:27:75.26:3166,75,0	1/1:2,9:12:33.11:1518,33,0
chr10	77474766	.	G	GA	5582.82	PASS	AB=0.692;AC=33;AF=0.589;AN=56;BaseQRankSum=4.874;DP=355;FS=1.976;HRun=2;HaplotypeScore=124.7711;InbreedingCoeff=0.8691;MQ=39.39;MQ0=6;MQRankSum=-5.644;QD=36.25;ReadPosRankSum=-3.279;VQSLOD=3.6446;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.28:0,84,1175	1/1:0,3:3:9.03:138,9,0	0/0:18,0:10:27.08:0,27,363	0/0:8,0:3:9.03:0,9,126	0/0:22,0:22:29.69:0,30,542	1/1:1,11:12:32.22:517,32,0	1/1:2,5:7:18.06:269,18,0	1/1:6,7:11:33.08:447,33,0	0/0:20,0:20:43.19:0,43,366	1/1:2,3:5:7.33:139,7,0	1/1:1,6:7:17.80:245,18,0	0/0:21,0:21:58.52:0,59,584	0/0:19,0:18:51.84:0,52,601	1/1:2,7:9:17.31:280,17,0	1/1:2,8:10:22.75:375,23,0	1/1:2,5:7:13.41:234,13,0	1/1:4,5:9:4.98:248,5,0	1/1:1,10:11:21.07:330,21,0	0/1:5,4:9:17:209,0,17	1/1:2,13:14:39.13:603,39,0	1/1:0,7:7:21.07:325,21,0	0/0:15,0:14:25.70:0,26,254	0/0:14,0:14:35.22:0,35,388	0/0:18,0:18:43.82:0,44,505	0/0:18,0:18:24.15:0,24,416	1/1:2,12:14:34.43:566,34,0	1/1:0,11:11:30.10:473,30,0	1/1:1,3:4:12.04:185,12,0
chr10	77474767	.	G	GA	1055.80	PASS	AB=0.956;AC=37;AF=0.661;AN=56;BaseQRankSum=9.150;DP=353;FS=2.521;HRun=2;HaplotypeScore=139.0645;InbreedingCoeff=0.2585;MQ=39.10;MQ0=7;MQRankSum=-5.001;QD=4.01;ReadPosRankSum=-3.464;VQSLOD=-0.7280;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.25:0,84,1027	1/1:3,0:3:4.26:31,4,0	0/0:16,0:9:24.03:0,24,269	0/0:8,0:3:9.03:0,9,111	0/1:20,2:22:5.76:6,0,143	1/1:12,0:12:23.54:114,24,0	1/1:7,0:7:15.02:66,15,0	0/1:12,0:10:1.31:27,0,1	0/1:18,2:20:62.96:79,0,63	0/1:5,0:5:5.04:11,0,5	1/1:7,0:7:12.39:51,12,0	0/1:20,1:21:11.58:12,0,170	0/0:19,0:18:2.85:0,3,109	1/1:8,0:8:11.23:64,11,0	1/1:10,0:10:9.37:69,9,0	1/1:7,0:7:1.25:35,1,0	1/1:9,0:9:9.54:59,10,0	1/1:11,0:11:16.13:54,16,0	0/1:9,0:8:29.45:29,0,33	1/1:15,0:14:30.42:123,30,0	1/1:7,0:7:18.57:75,19,0	0/1:15,1:15:24.38:82,0,24	0/1:13,1:14:5.41:5,0,97	0/0:18,0:18:22.34:0,22,160	0/1:18,1:19:22.45:22,0,97	1/1:14,0:14:15.11:71,15,0	1/1:10,0:10:25.79:99,26,0	1/1:5,0:4:10.82:51,11,0
chr10	77474770	.	GGAAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA	G	9612.43	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=5.156;DP=354;FS=3.654;HRun=0;HaplotypeScore=341.5909;InbreedingCoeff=0.9697;MQ=39.52;MQ0=6;MQRankSum=-5.785;QD=64.08;ReadPosRankSum=-3.633;VQSLOD=2.7227;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.32:0,93,9435	1/1:3,0:3:9.03:144,9,0	0/0:14,0:8:21.07:0,21,467	0/0:8,0:3:9.03:0,9,252	0/0:21,0:23:59:0,59,5910	1/1:11,1:12:36.12:799,36,0	1/1:7,0:7:18.06:264,18,0	1/1:12,0:10:30.10:525,30,0	0/0:18,0:20:46.13:0,46,4589	1/1:3,2:5:15.05:698,15,0	1/1:6,1:7:18.06:404,18,0	0/0:20,0:21:53.66:0,54,6889	0/0:20,0:19:21.36:0,21,4540	1/1:6,2:8:24.08:703,24,0	1/1:8,2:10:30.10:929,30,0	1/1:5,2:7:21.07:792,21,0	1/1:8,1:9:23.28:612,23,0	1/1:10,0:10:21.07:372,21,0	1/1:8,1:8:24.08:625,24,0	1/1:14,0:14:39.13:641,39,0	1/1:7,0:7:20.72:285,21,0	0/0:14,0:14:35.87:0,36,2584	0/0:13,0:14:30.47:0,30,3492	0/0:19,0:19:34.07:0,34,3272	0/0:18,0:19:21.37:0,21,3959	1/1:12,2:14:42.14:1156,42,0	1/1:10,0:10:30.10:477,30,0	1/1:5,0:4:12.04:187,12,0
chr10	77474774	.	G	GA	478.35	PASS	AB=0.905;AC=14;AF=0.250;AN=56;BaseQRankSum=4.533;DP=329;FS=4.446;HRun=2;HaplotypeScore=134.0918;InbreedingCoeff=0.0887;MQ=39.53;MQ0=5;MQRankSum=-4.478;QD=5.37;ReadPosRankSum=-1.954;VQSLOD=-0.0332;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.30:0,90,1251	1/1:1,0:1:2.04:6,2,0	0/0:12,0:8:15.05:0,15,192	0/0:7,0:3:9.03:0,9,126	0/0:22,0:22:55.39:0,55,333	0/0:12,0:12:25.19:0,25,115	0/1:5,1:6:23.72:36,0,24	0/1:6,4:8:15.34:124,0,15	0/0:17,0:17:33.04:0,33,191	0/0:4,0:4:6.54:0,7,20	0/1:6,0:6:1.09:48,0,1	0/0:21,0:21:55.49:0,55,362	0/0:20,0:19:50.48:0,50,308	0/1:7,0:7:16.08:16,0,48	0/1:8,0:8:3.61:4,0,45	0/0:6,0:6:12.61:0,13,47	0/1:6,3:9:14.44:75,0,14	0/1:8,0:8:14.28:14,0,27	0/1:5,3:7:11.45:121,0,11	1/1:14,0:13:2.86:109,3,0	0/1:7,0:7:0.21:65,0,0	0/0:14,0:13:19.97:0,20,107	0/0:15,0:15:31.85:0,32,199	0/0:19,0:19:46.74:0,47,312	0/0:19,0:19:45.84:0,46,251	0/0:12,0:12:28.33:0,28,109	0/0:8,0:8:0.21:0,0,73	0/1:5,0:4:2.01:2,0,11
chr10	77474782	.	AG	A	3841.27	PASS	AB=0.697;AC=31;AF=0.554;AN=56;BaseQRankSum=11.423;DP=320;FS=5.630;HRun=1;HaplotypeScore=133.3998;InbreedingCoeff=0.7384;MQ=39.90;MQ0=4;MQRankSum=-7.463;QD=29.55;ReadPosRankSum=-4.154;VQSLOD=2.0443;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.24:0,87,1257	1/1:0,4:4:12.04:163,12,0	0/0:6,0:5:6.02:0,6,88	0/0:5,0:2:6.02:0,6,81	0/0:23,0:23:69.21:0,69,975	1/1:1,7:8:23.29:293,23,0	1/1:2,8:10:15.78:315,16,0	0/1:7,4:8:29.29:133,0,29	0/0:19,0:19:48.14:0,48,645	1/1:2,5:7:19.49:216,19,0	1/1:1,5:6:18.02:224,18,0	0/0:23,0:23:69.17:0,69,934	0/0:18,0:17:51.13:0,51,690	1/1:2,4:6:17.18:170,17,0	1/1:2,5:7:19.79:216,20,0	1/1:3,7:10:28.48:320,28,0	0/1:4,4:8:4.60:115,0,5	1/1:0,4:4:12:143,12,0	0/1:5,4:8:68.15:149,0,68	1/1:2,8:9:24.08:327,24,0	1/1:1,2:3:6.02:81,6,0	0/0:15,0:14:36.11:0,36,485	0/0:14,0:14:39.12:0,39,544	0/0:18,0:18:49.93:0,50,682	0/0:19,0:19:54.18:0,54,777	1/1:3,12:15:43.52:523,44,0	1/1:1,7:8:24.02:289,24,0	1/1:0,4:4:12.04:163,12,0
chr10	77474803	.	GAA	G	7620.75	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=11.447;DP=418;FS=8.310;HRun=3;HaplotypeScore=169.7753;InbreedingCoeff=0.9671;MQ=44.02;MQ0=2;MQRankSum=-10.267;QD=36.82;ReadPosRankSum=0.898;VQSLOD=3.6750;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.30:0,96,1589	1/1:0,4:4:12.04:179,12,0	0/0:13,0:11:26.04:0,26,252	0/0:6,0:5:2.82:0,3,86	0/0:24,0:24:69.23:0,69,1138	1/1:3,8:11:33.07:469,33,0	1/1:5,9:14:33.09:472,33,0	1/1:4,17:20:60.16:830,60,0	0/0:22,0:22:57.19:0,57,932	1/1:6,9:15:42.02:524,42,0	1/1:1,8:9:24.08:359,24,0	0/0:26,0:26:78.26:0,78,1329	0/0:19,0:18:54.18:0,54,890	1/1:2,5:7:21.06:295,21,0	1/1:9,7:16:39.07:500,39,0	1/1:9,7:16:48.03:580,48,0	1/1:5,5:10:26.96:309,27,0	1/1:4,5:9:24.03:296,24,0	1/1:7,5:12:33.04:426,33,0	1/1:1,10:10:30.10:444,30,0	1/1:3,6:9:21.06:290,21,0	0/0:16,0:15:36.11:0,36,566	0/0:18,0:18:51.17:0,51,809	0/0:17,0:17:42.29:0,42,604	0/0:18,0:18:51.17:0,51,900	1/1:7,13:20:60.08:796,60,0	1/1:0,13:13:33.11:492,33,0	1/1:1,9:10:24.08:360,24,0
chr10	77474805	.	A	AG	6245.25	PASS	AB=0.857;AC=35;AF=0.625;AN=56;BaseQRankSum=11.334;DP=433;FS=12.147;HRun=0;HaplotypeScore=171.4597;InbreedingCoeff=0.9483;MQ=44.79;MQ0=2;MQRankSum=-9.958;QD=28.01;ReadPosRankSum=0.394;VQSLOD=3.1295;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.29:0,96,1301	1/1:4,0:4:12.03:133,12,0	0/0:14,0:12:27.73:0,28,271	0/1:5,0:5:1.58:2,0,90	0/0:25,0:25:69.09:0,69,896	1/1:9,2:11:30.05:330,30,0	1/1:11,4:15:36.09:439,36,0	1/1:19,3:21:60:658,60,0	0/0:23,0:23:57.04:0,57,696	1/1:12,4:16:36.09:440,36,0	1/1:9,0:9:24.02:245,24,0	0/0:26,0:26:78.16:0,78,1003	0/0:19,0:18:54.13:0,54,713	1/1:8,0:8:22.24:202,22,0	1/1:10,7:17:39.72:477,40,0	1/1:9,6:16:42.89:555,43,0	1/1:6,6:12:24.03:296,24,0	1/1:5,4:9:24.05:301,24,0	1/1:7,6:13:33.06:394,33,0	1/1:11,0:10:30.05:327,30,0	1/1:7,2:9:21.02:254,21,0	0/0:15,0:14:35.99:0,36,420	0/0:19,0:19:51.03:0,51,654	0/0:18,0:18:41.52:0,42,451	0/0:19,0:19:54.11:0,54,687	1/1:17,5:22:57.07:615,57,0	1/1:13,0:13:32.85:331,33,0	1/1:9,0:10:24.02:246,24,0
chr10	77475349	.	T	TGCTTGC	13296.75	PASS	AB=0.820;AC=17;AF=0.304;AN=56;BaseQRankSum=-3.934;DP=612;FS=47.289;HRun=0;HaplotypeScore=211.6360;InbreedingCoeff=-0.4386;MQ=51.51;MQ0=5;MQRankSum=-8.671;QD=34.27;ReadPosRankSum=3.356;VQSLOD=2.8563;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:27.08:0,27,527	0/1:8,4:13:49.87:511,0,50	0/0:31,0:10:9.55:0,10,158	0/0:24,0:11:12.41:0,12,128	0/0:26,0:26:49.56:0,50,1216	0/1:18,6:24:99:774,0,246	0/1:13,0:14:97.26:354,0,97	0/1:33,6:38:99:1279,0,243	0/0:17,0:17:42.14:0,42,750	0/1:33,4:38:99:1196,0,405	0/1:19,3:23:99:537,0,239	0/0:16,0:16:45.15:0,45,800	0/0:16,0:16:36.11:0,36,643	0/1:10,4:16:98.30:725,0,98	0/1:17,3:21:99:706,0,168	0/1:17,3:21:66.23:1035,0,66	0/1:12,3:15:15.98:531,0,16	0/1:10,1:12:46.27:204,0,46	0/1:28,2:30:99:565,0,352	0/1:19,6:25:99:1047,0,138	0/1:10,1:11:42.28:154,0,42	0/0:20,0:20:60.21:0,60,1073	0/0:24,0:24:66.09:0,66,1156	0/0:10,0:11:24.04:0,24,401	0/0:29,0:29:69.24:0,69,1236	0/1:15,6:24:69.82:1083,0,70	0/1:18,7:24:99:1142,0,128	0/1:19,7:32:99:1454,0,213
chr10	77475362	.	A	AT	7050.85	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=5.033;DP=477;FS=10.722;HRun=8;HaplotypeScore=120.5869;InbreedingCoeff=0.8807;MQ=59.48;MQ0=2;MQRankSum=-8.114;QD=25.45;ReadPosRankSum=1.734;VQSLOD=3.6919;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:20.69:0,21,175	1/1:1,7:8:22.61:242,23,0	0/0:16,0:8:4.56:0,5,29	0/1:13,0:8:10.10:10,0,37	0/0:33,0:33:71.99:0,72,654	1/1:3,14:17:42.09:469,42,0	1/1:2,8:10:26.29:279,26,0	1/1:4,23:27:42.49:733,42,0	0/0:20,0:20:38.48:0,38,352	1/1:1,17:18:48.14:552,48,0	1/1:3,12:16:39.70:448,40,0	0/0:17,0:17:16.17:0,16,174	0/0:16,0:16:40.26:0,40,360	1/1:4,7:11:21.06:243,21,0	1/1:4,13:17:44.15:482,44,0	1/1:0,15:15:45.13:519,45,0	1/1:2,12:14:32.58:355,33,0	1/1:1,8:9:9.03:104,9,0	1/1:3,14:18:14.47:391,14,0	1/1:4,15:19:48.06:520,48,0	1/1:1,8:9:5.98:55,6,0	0/0:24,0:24:55.81:0,56,492	0/0:26,0:26:55.21:0,55,493	0/0:10,0:10:23.03:0,23,192	0/0:29,0:29:72.93:0,73,613	1/1:2,15:17:45.13:518,45,0	1/1:1,12:14:39.83:427,40,0	1/1:5,20:25:64.10:703,64,0
chr10	77475940	.	A	AG	16975.67	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-13.993;DP=651;FS=0.944;HRun=0;HaplotypeScore=71.4612;InbreedingCoeff=0.9950;MQ=90.82;MQ0=0;MQRankSum=-3.626;QD=44.67;ReadPosRankSum=0.921;VQSLOD=5.1783;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,163,2243	1/1:0,14:14:42.14:655,42,0	0/0:28,0:28:84.24:0,84,1115	0/0:28,0:28:83.80:0,84,1025	0/0:21,0:21:60.18:0,60,820	1/1:2,26:28:78.27:1241,78,0	1/1:0,32:32:90.31:1439,90,0	1/1:1,29:30:84.27:1310,84,0	0/0:21,0:21:63.21:0,63,881	1/1:0,19:19:54.18:861,54,0	1/1:1,5:6:12.04:192,12,0	0/0:23,0:23:63.21:0,63,875	0/0:16,0:16:45.15:0,45,628	1/1:0,17:17:51.17:815,51,0	1/1:3,17:20:60.20:953,60,0	1/1:1,10:11:33.11:527,33,0	1/1:4,40:44:99:1892,120,0	1/1:0,28:28:81.28:1295,81,0	1/1:2,14:16:42.14:668,42,0	1/1:5,14:19:54.18:842,54,0	1/1:2,36:38:99:1776,114,0	0/0:11,0:11:27.09:0,27,377	0/0:12,0:12:30.10:0,30,418	0/0:29,0:28:87.29:0,87,1214	0/0:25,0:25:75.25:0,75,1047	1/1:1,23:24:69.21:1075,69,0	1/1:3,22:25:69.20:1051,69,0	1/1:0,9:9:24.08:383,24,0
chr10	77476556	.	G	GTGGA	231.14	PASS	AC=12;AF=0.462;AN=26;BaseQRankSum=3.382;DP=157;FS=20.777;HRun=0;HaplotypeScore=36.5389;InbreedingCoeff=0.4921;MQ=25.71;MQ0=31;MQRankSum=-2.992;QD=6.08;ReadPosRankSum=-0.793;VQSLOD=0.1731;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:45.15:0,45,771	./.	0/0:31,0:5:3.01:0,3,38	0/0:26,0:9:22.84:0,23,272	./.	./.	1/1:13,3:11:1:42,1,0	0/0:9,0:5:8.72:0,9,52	0/0:4,0:2:3.01:0,3,45	1/1:3,2:3:6.49:154,6,0	./.	1/1:2,0:2:1.82:5,2,0	1/1:5,0:3:1.25:3,1,0	./.	1/1:3,1:3:9.02:126,9,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:5,0:3:0.89:2,1,0	0/0:5,0:2:3.01:0,3,30	0/0:4,0:2:3.47:0,3,29	./.	./.
chr10	77476580	.	T	TAATG	89.75	PASS	AB=0.900;AC=11;AF=0.262;AN=42;BaseQRankSum=3.447;DP=218;FS=14.115;HRun=0;HaplotypeScore=44.0185;InbreedingCoeff=0.2305;MQ=25.94;MQ0=39;MQRankSum=-1.776;QD=1.91;ReadPosRankSum=-0.199;VQSLOD=0.0395;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:51.09:0,51,947	1/1:0,2:1:3.01:73,3,0	0/0:29,0:1:3.01:0,3,58	0/0:30,0:3:8.96:0,9,92	0/0:4,0:2:3.01:0,3,37	./.	0/1:12,1:12:38.79:39,0,58	0/1:15,1:13:0.92:1,0,267	0/0:7,0:6:18.06:0,18,365	0/1:4,0:2:9.53:10,0,14	1/1:1,0:1:0.47:1,0,0	0/0:10,0:7:21.07:0,21,394	0/0:8,0:6:9.02:0,9,139	./.	1/1:2,0:3:3.88:20,4,0	./.	./.	./.	0/0:13,0:7:3.01:0,3,56	./.	0/0:6,2:4:0:0,0,0	0/0:9,0:5:4.26:0,4,55	./.	0/0:8,0:7:9.50:0,10,150	0/0:6,0:4:2.99:0,3,24	0/0:8,0:4:3.48:0,3,63	1/1:1,2:3:3.01:56,3,0	0/0:1,0:1:3.01:0,3,62
chr10	77476653	.	T	TG	352.29	PASS	AB=0.904;AC=17;AF=0.447;AN=38;BaseQRankSum=5.557;DP=312;FS=3.218;HRun=1;HaplotypeScore=41.4675;InbreedingCoeff=0.0688;MQ=24.43;MQ0=82;MQRankSum=-3.225;QD=2.77;ReadPosRankSum=0.155;VQSLOD=-0.5617;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,2:25:34.33:34,0,709	./.	0/0:48,0:3:9.03:0,9,116	0/0:67,0:10:20.02:0,20,249	1/1:6,1:5:3.07:11,3,0	./.	./.	0/1:16,2:7:26.60:52,0,27	0/1:10,1:9:26.82:27,0,176	1/1:8,3:8:19.19:178,19,0	./.	0/0:16,0:15:8.57:0,9,423	0/0:16,0:15:15.32:0,15,341	./.	1/1:1,2:3:5.76:58,6,0	./.	./.	1/1:1,0:1:3:27,3,0	0/1:5,1:2:19.96:20,0,33	./.	0/1:12,3:8:5.82:6,0,10	0/0:6,0:3:0:0,0,0	0/0:6,0:4:3.01:0,3,32	0/1:10,0:10:5.67:6,0,120	0/0:3,0:2:3.01:0,3,39	0/1:11,0:6:9.91:10,0,64	1/1:2,1:3:5.38:53,5,0	./.
chr10	77476655	.	A	AG	531.32	PASS	AB=0.811;AC=11;AF=0.289;AN=38;BaseQRankSum=4.209;DP=311;FS=0.000;HRun=1;HaplotypeScore=38.1122;InbreedingCoeff=0.1898;MQ=24.01;MQ0=87;MQRankSum=-3.691;QD=7.70;ReadPosRankSum=2.002;VQSLOD=0.7543;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:23:37.24:0,37,803	./.	0/0:48,0:3:9.03:0,9,126	0/0:68,0:9:16.41:0,16,192	0/0:7,0:5:2.95:0,3,24	./.	./.	0/1:12,7:7:28.33:134,0,28	0/0:11,0:9:8.53:0,9,194	1/1:4,6:7:17.56:242,18,0	./.	0/0:16,0:15:37.01:0,37,504	0/0:16,0:15:33.04:0,33,435	./.	0/1:2,1:3:9.51:48,0,10	./.	./.	1/1:1,0:1:1.82:5,2,0	0/1:7,0:2:0.53:1,0,37	./.	0/1:11,4:8:30.69:42,0,31	0/0:7,0:3:0:0,0,0	0/0:5,0:3:3.01:0,3,42	0/0:9,0:9:17.44:0,17,180	0/0:3,0:2:3.01:0,3,42	0/1:8,3:6:63.99:129,0,64	1/1:2,1:3:4.57:52,5,0	./.
chr10	77476707	.	GGTGA	G	241.21	PASS	AB=0.870;AC=10;AF=0.250;AN=40;BaseQRankSum=4.971;DP=254;FS=0.000;HRun=0;HaplotypeScore=52.1119;InbreedingCoeff=0.3166;MQ=38.48;MQ0=43;MQRankSum=-1.763;QD=5.24;ReadPosRankSum=-0.842;VQSLOD=1.0710;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:47.08:0,47,1760	./.	0/0:50,0:13:30.10:0,30,600	0/0:45,0:19:21.34:0,21,771	0/0:3,0:1:3.01:0,3,81	./.	0/1:11,3:11:99:152,0,165	0/0:28,1:8:13.29:0,13,246	0/0:7,0:5:3.01:0,3,81	0/0:6,0:3:1.82:0,2,5	1/1:6,0:3:1.25:3,1,0	0/0:7,0:7:15.05:0,15,339	0/1:10,1:10:44.87:45,0,234	./.	./.	./.	./.	1/1:2,1:3:5.99:79,6,0	0/0:3,1:2:3.01:0,3,81	0/0:3,0:2:6.02:0,6,118	1/1:7,0:3:5.98:58,6,0	1/1:5,0:2:2.98:22,3,0	0/0:6,0:6:9.03:0,9,170	0/0:4,0:4:12.04:0,12,315	0/0:4,0:1:3.01:0,3,57	0/0:3,0:2:3.01:0,3,76	./.	./.
chr10	77476712	.	G	GTGGA	716.25	PASS	AB=0.884;AC=7;AF=0.219;AN=32;BaseQRankSum=3.594;DP=260;FS=14.423;HRun=0;HaplotypeScore=63.3720;InbreedingCoeff=0.0542;MQ=39.10;MQ0=28;MQRankSum=-3.350;QD=9.55;ReadPosRankSum=-2.228;VQSLOD=0.7535;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:7.87:0,8,883	./.	0/0:43,0:15:30.07:0,30,428	0/0:43,0:22:26.32:0,26,341	0/0:3,0:1:3.01:0,3,53	./.	0/1:7,4:11:43.76:385,0,44	0/1:37,3:17:51.76:386,0,52	0/0:7,0:5:3.01:0,3,53	./.	./.	0/0:8,0:8:12.01:0,12,183	0/1:10,0:9:19.49:19,0,96	./.	./.	./.	./.	0/0:2,1:3:2.89:0,3,27	0/0:5,0:3:3.01:0,3,52	0/0:3,0:2:6.02:0,6,103	1/1:7,1:5:2.13:11,2,0	1/1:4,0:2:2.92:17,3,0	0/0:6,0:6:3.01:0,3,39	0/0:4,0:4:12.04:0,12,184	./.	./.	./.	./.
chr10	77476738	.	A	AG	366.58	PASS	AB=0.905;AC=8;AF=0.211;AN=38;BaseQRankSum=4.590;DP=342;FS=2.843;HRun=1;HaplotypeScore=84.9647;InbreedingCoeff=0.1260;MQ=38.26;MQ0=25;MQRankSum=-3.226;QD=2.89;ReadPosRankSum=1.243;VQSLOD=-0.0709;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:78.54:0,79,1275	./.	0/0:47,0:23:22.04:0,22,600	0/0:42,0:26:41.26:0,41,670	./.	0/0:3,0:3:2.96:0,3,19	0/1:9,2:10:99:118,0,151	0/1:57,9:41:99:204,0,864	0/0:6,0:4:5.85:0,6,56	0/0:11,0:7:9.03:0,9,126	0/0:6,0:6:6.02:0,6,84	0/0:10,0:10:22.11:0,22,197	0/0:12,0:10:3.46:0,3,156	./.	0/0:1,0:1:0:0,0,0	./.	./.	1/1:1,1:2:3.01:48,3,0	0/0:22,0:10:8.69:0,9,106	0/0:4,0:4:4.45:0,4,81	0/1:26,0:20:22.55:23,0,227	1/1:5,0:5:7.95:32,8,0	./.	0/0:3,0:3:6.02:0,6,75	./.	0/1:15,2:16:58.34:58,0,317	./.	./.
chr10	77476757	.	ATTGATGTG	A	640.46	PASS	AB=0.933;AC=9;AF=0.265;AN=34;BaseQRankSum=5.298;DP=391;FS=0.000;HRun=0;HaplotypeScore=150.1072;InbreedingCoeff=0.1391;MQ=57.78;MQ0=11;MQRankSum=-4.235;QD=6.22;ReadPosRankSum=-1.506;VQSLOD=2.3992;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:75.74:0,76,4685	./.	0/0:52,0:40:99:0,111,3526	0/0:53,0:42:45.36:0,45,2990	./.	0/0:5,0:3:1.26:0,1,17	1/1:8,1:8:7.21:112,7,0	0/0:69,1:45:5.82:0,6,2166	0/1:4,0:3:0.86:1,0,25	0/1:22,0:15:8.57:9,0,924	0/0:9,0:8:8.99:0,9,284	0/1:9,0:8:0.79:115,0,1	0/0:9,0:7:14.94:0,15,218	./.	./.	./.	./.	1/1:2,0:2:0.47:1,0,0	0/1:16,8:20:99:479,0,528	0/0:7,0:6:12.04:0,12,451	0/1:30,0:25:29.53:30,0,382	0/0:5,0:6:11.97:0,12,270	./.	./.	./.	0/0:22,0:18:2.11:0,2,889	./.	./.
chr10	77476761	.	ATGTG	A	934.40	PASS	AB=0.881;AC=10;AF=0.294;AN=34;BaseQRankSum=6.469;DP=413;FS=2.304;HRun=0;HaplotypeScore=121.9730;InbreedingCoeff=-0.1216;MQ=58.08;MQ0=13;MQRankSum=-5.806;QD=4.39;ReadPosRankSum=-0.771;VQSLOD=2.4933;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,1:45:99:0,105,3169	./.	0/0:57,0:42:99:0,100,2550	0/0:55,0:45:62.29:0,62,2484	./.	0/0:7,0:5:2.97:0,3,20	1/1:11,1:11:14.84:111,15,0	0/1:65,10:48:99:265,0,1307	0/1:4,0:3:2.22:2,0,16	0/1:21,2:16:76.11:76,0,583	0/0:9,0:8:6.02:0,6,150	0/1:6,4:9:3.45:236,0,3	0/1:8,3:9:87.20:87,0,134	./.	./.	./.	./.	./.	0/1:21,1:19:99:104,0,330	0/0:7,0:6:12.04:0,12,286	0/1:33,2:27:85.38:85,0,185	0/0:7,0:7:11.21:0,11,147	0/0:1,0:1:2.92:0,3,17	./.	./.	0/1:17,4:17:86.20:86,0,531	./.	./.
chr10	77476779	.	G	GGAT	165.01	PASS	AB=0.986;AC=10;AF=0.192;AN=52;BaseQRankSum=2.584;DP=591;FS=13.024;HRun=0;HaplotypeScore=143.5011;InbreedingCoeff=-0.0940;MQ=41.87;MQ0=30;MQRankSum=-1.552;QD=0.46;ReadPosRankSum=0.497;VQSLOD=2.2884;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:55:99:0,138,2088	0/0:5,0:4:3.01:0,3,49	0/1:45,0:30:62.50:62,0,648	0/0:63,0:44:30.80:0,31,1448	./.	0/0:9,0:5:6.88:0,7,100	0/1:18,0:14:0.42:0,0,297	0/1:103,3:74:66.77:67,0,2056	0/0:9,0:7:12.01:0,12,134	0/1:36,1:27:30.87:31,0,441	0/0:13,0:10:2.98:0,3,49	0/0:12,0:12:9.09:0,9,313	0/0:14,0:13:0.86:0,1,335	0/0:5,0:4:6.02:0,6,98	0/0:4,0:2:6.02:0,6,98	0/0:5,0:5:9.03:0,9,147	0/0:2,0:2:6.02:0,6,98	0/0:2,0:2:3.01:0,3,41	0/1:40,0:20:11.67:12,0,339	0/0:11,0:8:6.02:0,6,98	0/1:53,1:43:33.94:34,0,205	1/1:10,0:7:10.71:56,11,0	0/0:2,0:2:2.60:0,3,10	0/1:5,0:5:7.71:14,0,8	./.	0/1:43,0:31:19:19,0,480	0/0:6,0:6:12.04:0,12,196	0/0:4,0:4:9.01:0,9,122
chr10	77476792	.	ATGGG	A	256.03	PASS	AB=0.979;AC=10;AF=0.185;AN=54;BaseQRankSum=5.536;DP=583;FS=7.637;HRun=0;HaplotypeScore=132.0119;InbreedingCoeff=-0.0769;MQ=35.11;MQ0=64;MQRankSum=-3.592;QD=0.71;ReadPosRankSum=-3.923;VQSLOD=0.7657;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:53:99:0,101,2511	0/0:6,0:4:3.01:0,3,81	0/0:50,0:19:19.61:0,20,637	0/1:63,0:34:1.13:1,0,939	0/1:3,0:3:4.45:4,0,6	0/0:7,0:2:6.02:0,6,156	0/0:20,0:15:18.53:0,19,484	0/1:93,0:63:5.21:5,0,2483	0/0:10,0:9:17.81:0,18,168	0/1:37,0:23:99:111,0,673	0/0:8,0:5:3.01:0,3,40	0/0:17,0:16:1.07:0,1,335	0/1:15,2:15:72.97:73,0,291	0/0:5,0:4:9.03:0,9,233	0/0:5,0:3:6.02:0,6,161	0/0:5,0:5:12.04:0,12,314	0/0:2,0:2:6.02:0,6,161	0/0:2,0:2:3.01:0,3,81	0/1:40,0:13:6.72:7,0,239	0/0:7,0:3:6.02:0,6,145	0/1:50,1:39:14.67:15,0,202	1/1:9,1:7:5.94:25,6,0	0/0:2,0:2:3.01:0,3,59	0/0:5,0:5:11.70:0,12,92	./.	0/1:43,2:29:99:139,0,778	0/0:7,0:7:12.04:0,12,312	0/0:5,0:4:9.03:0,9,205
chr10	77476805	.	TGATG	T	977.86	PASS	AB=0.868;AC=9;AF=0.173;AN=52;BaseQRankSum=5.448;DP=636;FS=74.046;HRun=0;HaplotypeScore=141.4449;InbreedingCoeff=0.0957;MQ=30.23;MQ0=73;MQRankSum=-5.542;QD=5.15;ReadPosRankSum=4.012;VQSLOD=-0.7653;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:41:86.69:0,87,1953	0/0:9,0:7:6.02:0,6,103	1/1:40,0:12:1.65:5,2,0	0/0:47,0:18:11.73:0,12,131	0/1:6,0:5:1.12:1,0,46	0/0:12,0:9:6.02:0,6,108	0/0:50,0:43:68.92:0,69,915	0/0:92,0:65:71.88:0,72,1625	1/1:4,6:9:15.03:257,15,0	0/1:47,0:28:49.82:50,0,646	./.	0/1:6,10:17:23.39:402,0,23	0/1:9,7:14:46.08:326,0,46	0/0:12,0:11:15.05:0,15,235	0/0:9,0:7:16.29:0,16,252	0/0:8,0:8:15.05:0,15,238	0/0:4,0:3:6.02:0,6,109	0/0:2,0:2:6.02:0,6,112	0/0:27,0:9:12.04:0,12,202	0/0:8,0:4:3.01:0,3,61	0/0:73,0:61:19.52:0,20,257	0/0:2,2:4:5.83:0,6,34	0/0:2,0:2:3:0,3,28	0/0:1,2:5:2.74:0,3,12	./.	0/1:47,0:34:61.67:62,0,436	0/0:9,0:10:15.05:0,15,265	0/0:5,0:4:0.10:0,0,61
chr10	77476812	.	TG	T	479.82	PASS	AB=0.914;AC=12;AF=0.214;AN=56;BaseQRankSum=5.789;DP=676;FS=8.853;HRun=2;HaplotypeScore=132.0095;InbreedingCoeff=0.1572;MQ=25.97;MQ0=82;MQRankSum=-0.447;QD=2.32;ReadPosRankSum=3.524;VQSLOD=-0.6822;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,1:41:99:0,100,1409	0/0:12,0:10:11.95:0,12,144	0/1:35,1:6:42.42:42,0,82	0/1:38,4:10:54.49:54,0,187	1/1:2,4:5:8.62:87,9,0	0/0:14,0:11:17.80:0,18,163	0/0:54,0:46:83.99:0,84,1100	0/0:106,4:67:75.44:0,75,2019	0/1:10,0:9:0.22:4,0,0	0/0:55,2:34:36.58:0,37,924	0/1:7,0:3:0:0,0,0	0/1:13,5:17:18.70:155,0,19	0/1:12,5:15:39.60:136,0,40	0/0:12,0:11:15.05:0,15,223	0/1:11,1:10:17.90:18,0,198	0/0:10,0:10:17.99:0,18,242	0/0:4,0:3:6.02:0,6,90	0/0:3,0:3:6.49:0,6,90	0/0:24,2:11:12.67:0,13,193	0/0:10,0:5:6.02:0,6,87	0/0:82,0:68:30.38:0,30,353	0/0:6,0:4:5.93:0,6,44	1/1:2,1:2:3.01:39,3,0	0/0:5,0:5:5.98:0,6,63	0/0:1,0:1:0.47:0,0,1	0/1:53,3:37:83.73:84,0,620	0/0:12,0:11:18.02:0,18,244	0/0:5,0:4:6.02:0,6,86
chr10	77476857	.	ATGGG	A	48.81	PASS	AB=0.996;AC=9;AF=0.167;AN=54;BaseQRankSum=3.896;DP=714;FS=11.975;HRun=0;HaplotypeScore=140.1111;InbreedingCoeff=0.1399;MQ=30.33;MQ0=68;MQRankSum=-3.071;QD=0.31;ReadPosRankSum=-3.458;VQSLOD=0.9931;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:26:23.69:24,0,985	0/0:13,0:11:20.99:0,21,324	0/0:24,0:8:21.04:0,21,345	0/1:17,0:7:13.34:13,0,250	0/1:3,0:3:0:0,0,0	0/0:22,0:16:8.97:0,9,111	0/0:41,0:38:67.06:0,67,1190	0/0:116,1:70:59.59:0,60,1816	0/0:3,0:3:6.02:0,6,94	0/0:77,1:51:58.41:0,58,1411	0/0:15,0:8:3.48:0,3,62	0/1:9,0:10:41.70:42,0,130	0/0:7,0:7:4.56:0,5,112	0/0:14,1:15:3.95:0,4,62	0/0:16,0:15:27.52:0,28,499	0/0:11,0:10:6.02:0,6,112	0/0:7,0:5:6.02:0,6,88	0/0:5,0:3:3.01:0,3,60	0/0:55,0:23:36.92:0,37,588	0/0:28,0:18:16.38:0,16,289	0/1:85,2:78:27.62:28,0,266	0/0:5,0:3:4.57:0,5,79	1/1:10,0:9:7.19:58,7,0	./.	0/0:5,0:3:1.42:0,1,14	0/0:71,2:55:23.06:0,23,1207	0/0:11,0:10:18.53:0,19,310	1/1:3,0:3:1.55:4,2,0
chr10	77488369	.	T	TAAAA	6537.91	PASS	AB=0.718;AC=35;AF=0.625;AN=56;BaseQRankSum=4.265;DP=487;FS=7.898;HRun=14;HaplotypeScore=122.5140;InbreedingCoeff=0.7741;MQ=67.35;MQ0=0;MQRankSum=-7.458;QD=19.01;ReadPosRankSum=-5.685;VQSLOD=1.3011;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:64.06:0,64,754	1/1:3,0:5:9.03:152,9,0	0/0:14,0:11:11.38:0,11,74	0/1:8,0:8:0.75:1,0,30	0/1:7,0:25:11.54:77,0,12	1/1:9,1:16:15.05:290,15,0	1/1:12,0:12:9.03:144,9,0	1/1:21,1:29:50.96:748,51,0	0/0:10,0:12:29.90:0,30,337	1/1:14,6:22:42.06:649,42,0	1/1:9,7:21:40.85:588,41,0	0/0:16,0:18:23.52:0,24,293	0/0:12,0:12:21.78:0,22,287	1/1:12,5:18:27.07:473,27,0	0/0:5,0:20:18.45:0,18,104	1/1:6,6:14:24.08:453,24,0	1/1:6,1:18:17.86:283,18,0	1/1:3,5:9:12.04:223,12,0	1/1:12,0:18:22.02:255,22,0	1/1:18,1:26:52.83:818,53,0	1/1:6,0:13:2.97:59,3,0	0/0:7,0:8:16.17:0,16,172	0/0:16,0:19:30.61:0,31,316	0/0:12,0:13:12.82:0,13,312	0/1:4,0:16:3.43:3,0,42	1/1:18,0:21:23.97:331,24,0	1/1:21,7:34:43.94:736,44,0	1/1:5,8:16:17.97:254,18,0
chr10	77488833	.	CG	C	6172.30	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.836;DP=662;FS=10.376;HRun=5;HaplotypeScore=68.1621;InbreedingCoeff=0.9995;MQ=79.10;MQ0=0;MQRankSum=-1.848;QD=28.58;ReadPosRankSum=3.680;VQSLOD=4.8071;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,1786	0/0:18,0:18:54.18:0,54,734	0/0:15,0:15:25.73:0,26,339	0/0:15,1:16:33.01:0,33,395	1/1:2,26:28:75.21:850,75,0	0/0:18,0:18:48.12:0,48,632	0/0:17,0:17:48.09:0,48,633	0/0:22,0:22:57.12:0,57,716	1/1:1,20:21:54.15:612,54,0	0/0:26,0:26:63.24:0,63,935	0/0:10,0:10:30.08:0,30,393	1/1:3,23:26:66.15:733,66,0	1/1:2,15:17:36.10:408,36,0	0/0:25,1:26:38.24:0,38,895	1/1:2,27:29:69.19:782,69,0	0/0:28,0:28:78.26:0,78,1061	0/0:31,0:31:90.27:0,90,1210	0/0:11,0:11:30.10:0,30,410	0/0:22,0:22:57.18:0,57,762	0/0:21,0:21:57.19:0,57,778	0/0:42,0:42:99:0,126,1628	1/1:1,21:22:57.16:645,57,0	1/1:0,19:19:45.13:510,45,0	1/1:0,30:30:81.23:918,81,0	1/1:1,23:24:63.18:714,63,0	0/0:29,0:29:84.24:0,84,1124	0/0:26,0:26:75.25:0,75,1025	0/0:21,0:21:63.19:0,63,837
chr10	77489290	.	GA	G	9955.74	PASS	AB=0.882;AC=33;AF=0.589;AN=56;BaseQRankSum=11.721;DP=749;FS=10.137;HRun=7;HaplotypeScore=84.2151;InbreedingCoeff=0.9266;MQ=77.52;MQ0=1;MQRankSum=0.872;QD=23.54;ReadPosRankSum=3.161;VQSLOD=4.8119;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:67,0:67:99:0,187,2274	1/1:0,13:13:36.08:367,36,0	0/0:32,0:27:29.17:0,29,513	0/1:26,1:26:19.92:20,0,484	0/0:29,0:29:66.67:0,67,818	1/1:2,17:19:48.11:489,48,0	1/1:1,25:26:66.15:673,66,0	1/1:4,17:21:51.03:504,51,0	0/0:21,0:21:57.17:0,57,703	1/1:2,24:26:72.14:722,72,0	1/1:0,22:22:63.14:642,63,0	0/0:30,0:30:84.26:0,84,1044	0/0:23,0:23:69.16:0,69,828	1/1:1,22:23:54.12:550,54,0	0/0:28,0:28:78.22:0,78,955	1/1:2,26:28:28.41:605,28,0	1/1:2,29:31:75.17:765,75,0	1/1:3,22:25:51.12:520,51,0	1/1:3,15:18:41.86:408,42,0	1/1:3,22:25:66.10:661,66,0	1/1:1,28:29:69.15:703,69,0	0/0:22,0:22:63.19:0,63,781	0/0:21,0:21:63.19:0,63,777	0/0:23,0:23:66.19:0,66,805	0/0:29,0:29:78.24:0,78,969	1/1:2,35:37:99:1040,102,0	1/1:0,39:39:99:1010,99,0	1/1:0,11:11:27.06:275,27,0
chr10	77490198	.	G	GC	19562.25	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=11.741;DP=721;FS=1.062;HRun=0;HaplotypeScore=114.9845;InbreedingCoeff=0.9999;MQ=81.10;MQ0=0;MQRankSum=-5.392;QD=35.89;ReadPosRankSum=0.852;VQSLOD=4.3086;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,1758	1/1:0,16:16:45.15:622,45,0	0/0:14,0:14:41.34:0,41,523	0/0:24,0:25:68.91:0,69,857	0/0:27,0:27:78.25:0,78,1071	1/1:2,27:29:72.23:1014,72,0	1/1:1,25:26:54.18:762,54,0	1/1:3,45:48:99:1787,130,0	1/1:1,20:21:54.18:758,54,0	1/1:1,24:25:75.19:998,75,0	1/1:1,14:15:33.10:442,33,0	1/1:0,36:36:93.31:1295,93,0	1/1:1,28:29:81.27:1124,81,0	1/1:1,20:21:45.15:627,45,0	0/0:29,0:29:81.26:0,81,1115	1/1:1,27:28:72.24:1009,72,0	1/1:2,21:23:57.19:795,57,0	1/1:0,20:20:57.19:808,57,0	1/1:2,12:14:42.13:569,42,0	1/1:0,28:28:78.21:1078,78,0	1/1:0,26:26:51.17:718,51,0	1/1:2,20:22:56.77:793,57,0	1/1:1,21:22:53.41:751,53,0	1/1:1,27:28:75.25:1054,75,0	0/0:38,0:38:93.29:0,93,1283	1/1:2,26:28:78.19:1032,78,0	1/1:0,14:14:33.10:448,33,0	1/1:0,26:26:78.26:1079,78,0
chr10	77490281	.	CAG	C	3520.43	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.268;DP=692;FS=3.882;HRun=0;HaplotypeScore=105.5555;InbreedingCoeff=0.9997;MQ=76.54;MQ0=1;MQRankSum=-0.419;QD=37.85;ReadPosRankSum=3.392;VQSLOD=5.8941;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,2133	0/0:10,0:10:30.08:0,30,512	0/0:19,0:19:51.04:0,51,874	0/0:18,0:18:48.14:0,48,829	1/1:0,29:28:84.28:1200,84,0	0/0:27,0:27:75.26:0,75,1363	0/0:20,0:20:57.20:0,57,1039	0/0:42,0:42:99:0,117,2055	0/0:15,0:15:39.13:0,39,711	0/0:28,0:28:84.29:0,84,1540	0/0:19,0:19:51.16:0,51,904	0/0:31,0:31:81.28:0,81,1478	0/0:22,0:22:57.15:0,57,1002	0/0:20,0:20:51.17:0,51,934	1/1:1,33:34:90.30:1289,90,0	0/0:27,0:27:75.26:0,75,1369	0/0:16,0:16:48.16:0,48,879	0/0:17,0:17:48.16:0,48,880	0/0:27,0:27:66.23:0,66,1210	0/0:31,0:31:90.31:0,90,1637	0/0:26,0:26:69.14:0,69,1194	0/0:14,0:14:39.13:0,39,710	0/0:14,0:14:39.13:0,39,710	0/0:25,0:25:63.22:0,63,1147	1/1:0,30:30:72.24:1032,72,0	0/0:33,0:33:93.29:0,93,1622	0/0:34,0:34:99:0,99,1807	0/0:22,0:22:60.21:0,60,1094
chr10	77490429	.	A	AT	2651.79	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.376;DP=547;FS=1.523;HRun=6;HaplotypeScore=88.2100;InbreedingCoeff=0.9983;MQ=86.06;MQ0=0;MQRankSum=-8.953;QD=29.80;ReadPosRankSum=2.289;VQSLOD=4.1810;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.13:0,57,581	0/0:14,0:14:33.04:0,33,327	0/0:22,0:22:51.11:0,51,524	0/0:18,0:18:47.73:0,48,450	0/0:29,0:29:75.16:0,75,765	0/0:20,0:20:57.13:0,57,581	0/0:12,0:12:33.07:0,33,337	0/0:31,0:30:69.14:0,69,699	1/1:6,10:16:39.09:473,39,0	0/0:20,0:20:54.12:0,54,551	0/0:16,0:16:45.10:0,45,459	1/1:0,14:14:42.13:528,42,0	1/1:3,18:21:24.56:612,25,0	0/0:11,0:11:27.06:0,27,275	0/0:27,0:27:78.18:0,78,796	0/0:21,0:21:60.14:0,60,612	0/0:20,0:20:57.13:0,57,581	0/0:22,0:22:57.13:0,57,582	0/0:17,0:17:36.08:0,36,367	0/0:33,0:33:87.17:0,87,881	0/0:11,0:11:33.08:0,33,337	1/1:0,11:11:33.11:415,33,0	1/1:3,15:18:45.10:548,45,0	1/1:1,8:9:21.07:264,21,0	0/0:25,0:25:69.12:0,69,689	0/0:21,0:21:57.12:0,57,581	0/0:26,0:26:78.14:0,78,781	0/0:21,0:21:63.11:0,63,634
chr10	77490466	.	TATACTATACTGAGCTAAATCCCCAGCCCC	T	6654.83	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.101;DP=557;FS=4.595;HRun=0;HaplotypeScore=407.1174;InbreedingCoeff=0.9419;MQ=77.36;MQ0=0;MQRankSum=-8.883;QD=102.38;ReadPosRankSum=3.704;VQSLOD=3.5154;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.23:0,66,7337	0/0:12,0:12:24.08:0,24,3181	0/0:26,0:26:69.24:0,69,4919	0/0:16,0:15:39.13:0,39,2873	0/0:36,0:35:96.30:0,96,11776	0/0:23,0:23:63.22:0,63,6789	0/0:13,0:13:36.12:0,36,3767	0/0:38,0:38:93.32:0,93,7377	1/1:6,7:13:21.07:1600,21,0	0/0:26,0:25:66.23:0,66,7820	0/0:24,0:24:54.19:0,54,7036	1/1:6,3:9:9.03:686,9,0	1/1:10,6:16:21.06:1397,21,0	0/0:12,0:12:36.12:0,36,4027	0/0:26,0:26:69.22:0,69,8264	0/0:20,0:20:42.14:0,42,5206	0/0:18,0:18:51.18:0,51,5661	0/0:24,0:24:63.22:0,63,8269	0/0:13,0:13:30.10:0,30,3013	0/0:37,0:37:99:0,108,12989	0/0:11,0:11:27.09:0,27,3226	1/1:6,4:10:12.04:914,12,0	1/1:3,8:11:24.08:1829,24,0	1/1:4,2:6:3.01:229,3,0	0/0:27,0:27:78.27:0,78,9919	0/0:21,0:21:51.18:0,51,5869	0/0:35,0:35:93.32:0,93,10811	0/0:12,0:12:36.12:0,36,4020
chr10	77491114	.	CGT	C	713.68	PASS	AB=0.929;AC=23;AF=0.442;AN=52;BaseQRankSum=0.264;DP=704;FS=3.571;HRun=0;HaplotypeScore=98.9570;InbreedingCoeff=0.3004;MQ=56.36;MQ0=21;MQRankSum=-0.064;QD=1.86;ReadPosRankSum=2.555;VQSLOD=1.5527;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,3:36:19.97:20,0,99	0/0:7,0:7:3:0,3,25	./.	./.	1/1:16,2:18:6.02:64,6,0	0/0:17,0:24:12.44:0,12,97	0/1:35,0:35:4.07:4,0,178	0/0:23,0:22:2.60:0,3,10	1/1:21,12:32:12.07:109,12,0	0/0:28,0:28:15.97:0,16,160	0/0:11,0:10:2.49:0,2,9	1/1:23,2:27:17.21:119,17,0	1/1:14,8:22:11.92:128,12,0	0/0:22,0:21:17.41:0,17,169	1/1:21,8:29:6.02:64,6,0	0/0:18,0:25:8.95:0,9,88	0/1:23,1:38:2.01:2,0,198	0/1:15,1:17:10.89:11,0,114	0/0:17,0:16:12.45:0,12,102	0/0:9,0:9:0:0,0,0	0/0:55,1:55:4.47:0,4,269	1/1:17,7:23:9.02:96,9,0	1/1:9,0:9:2.97:20,3,0	0/1:16,12:29:19.80:165,0,20	1/1:10,5:18:8.69:60,9,0	0/1:30,0:29:3.39:3,0,156	0/0:22,0:23:5.99:0,6,50	0/1:14,0:11:12.10:12,0,153
chr10	77492634	.	AGCT	A	6890.07	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=18.610;DP=805;FS=5.070;HRun=0;HaplotypeScore=147.5118;InbreedingCoeff=0.9998;MQ=81.69;MQ0=1;MQRankSum=-6.601;QD=40.29;ReadPosRankSum=4.877;VQSLOD=5.6856;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,2899	0/0:9,0:9:27.09:0,27,641	0/0:28,1:26:53.03:0,53,1618	0/0:33,0:32:83.47:0,83,2090	0/0:22,0:22:66.21:0,66,1551	0/0:25,0:25:75.26:0,75,1774	0/0:34,0:34:99:0,102,2380	0/0:45,0:45:99:0,135,3219	1/1:1,34:35:85.17:1403,85,0	0/0:28,0:28:84.27:0,84,1923	0/0:20,0:20:60.19:0,60,1364	1/1:7,27:34:94.53:1434,95,0	1/1:2,22:24:59.33:938,59,0	0/0:28,0:28:84.26:0,84,1885	0/0:30,0:30:90.31:0,90,2188	0/0:28,0:28:84.27:0,84,1982	0/0:39,0:39:99:0,117,2779	0/0:29,0:29:87.30:0,87,2125	0/0:20,0:20:60.21:0,60,1432	0/0:20,0:20:60.19:0,60,1378	0/0:33,0:33:96.33:0,96,2314	1/1:2,25:27:66.57:1066,67,0	1/1:2,17:19:52.06:851,52,0	1/1:0,32:32:71.71:1199,72,0	0/0:25,0:25:75.22:0,75,1702	0/0:29,0:29:87.30:0,87,2059	0/0:49,0:48:99:0,147,3436	0/0:17,0:17:45.15:0,45,1078
chr10	77493599	.	GTCTA	G	2938.21	PASS	AB=0.891;AC=28;AF=0.583;AN=48;BaseQRankSum=-5.549;DP=652;FS=0.650;HRun=0;HaplotypeScore=131.5186;InbreedingCoeff=0.5146;MQ=65.59;MQ0=12;MQRankSum=1.800;QD=8.16;ReadPosRankSum=-2.679;VQSLOD=2.3807;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,11:26:6.02:90,6,0	1/1:10,5:15:8.92:135,9,0	./.	./.	0/1:20,0:19:13.97:14,0,42	1/1:11,9:20:9.03:135,9,0	./.	./.	0/0:13,0:25:15.05:0,15,293	1/1:12,15:27:44.92:513,45,0	1/1:14,10:24:15.05:226,15,0	0/0:17,0:22:2.99:0,3,24	0/0:27,0:26:17.97:0,18,248	1/1:10,13:23:12.02:180,12,0	0/0:40,0:40:4.21:0,4,663	0/1:14,1:15:30.06:30,0,238	1/1:17,11:28:24.08:361,24,0	0/1:17,8:24:7.13:123,0,7	0/1:17,3:20:30.90:56,0,31	1/1:19,15:33:17.87:270,18,0	1/1:23,2:25:12.03:160,12,0	0/0:24,0:22:18.03:0,18,250	0/0:13,0:19:3.01:0,3,52	0/0:13,0:22:12.04:0,12,221	0/0:18,0:18:24.08:0,24,385	1/1:14,18:30:47.87:504,48,0	1/1:11,7:18:9.03:135,9,0	1/1:2,6:7:12.04:180,12,0
chr10	77494069	.	G	GCACACA	2492.49	PASS	AB=0.897;AC=17;AF=0.327;AN=52;BaseQRankSum=-0.416;DP=709;FS=3.753;HRun=0;HaplotypeScore=171.2226;InbreedingCoeff=0.4547;MQ=54.30;MQ0=9;MQRankSum=-6.377;QD=8.87;ReadPosRankSum=-3.892;VQSLOD=2.0046;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:45:76.29:0,76,1330	0/0:9,0:9:14.99:0,15,174	./.	./.	0/1:11,0:24:12.28:12,0,62	0/0:25,0:26:10.42:0,10,514	0/0:28,0:31:42.54:0,43,670	0/1:19,0:19:44.24:44,0,279	1/1:10,11:27:17.20:444,17,0	0/0:16,0:16:21.07:0,21,401	0/0:13,0:13:24.55:0,25,468	1/1:10,10:27:27.09:736,27,0	1/1:16,9:30:39.09:871,39,0	0/0:21,0:23:44.59:0,45,777	0/0:10,0:29:15.41:0,15,86	0/1:18,0:19:29.04:29,0,522	0/0:32,0:38:62.70:0,63,1039	0/0:31,0:37:58.08:0,58,1061	0/1:21,0:22:6.22:6,0,326	0/0:16,0:16:27.09:0,27,518	0/0:47,0:50:57.79:0,58,958	1/1:9,11:23:8.92:290,9,0	0/1:8,4:15:0:0,0,0	1/1:24,10:35:8.99:216,9,0	0/0:6,0:14:12.22:0,12,132	0/1:21,0:21:1.47:1,0,403	0/0:21,0:24:32.85:0,33,561	0/1:15,0:17:13.70:14,0,561
chr10	77495746	.	T	TA	1575.69	PASS	AB=0.671;AC=16;AF=0.286;AN=56;BaseQRankSum=-6.105;DP=438;FS=139.896;HRun=0;HaplotypeScore=63.1696;InbreedingCoeff=-0.0932;MQ=70.23;MQ0=0;MQRankSum=-7.809;QD=9.97;ReadPosRankSum=-0.819;VQSLOD=0.4042;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,1888	1/1:1,4:5:11.78:73,12,0	0/0:17,0:17:27.15:0,27,510	0/0:13,0:12:24.07:0,24,321	0/0:21,0:21:60.18:0,60,808	0/1:3,7:10:49.88:50,0,104	0/0:6,0:5:15.05:0,15,208	0/1:10,21:31:99:659,0,269	0/0:22,0:22:63.20:0,63,863	0/1:7,7:14:99:186,0,222	0/1:6,4:10:65.83:66,0,132	0/0:23,0:23:69.21:0,69,926	0/0:19,0:19:48.16:0,48,669	0/1:2,3:5:40.06:40,0,51	0/0:37,0:36:99:0,102,1361	0/1:5,5:10:44.15:44,0,159	0/1:15,3:18:59.38:59,0,384	0/1:9,3:12:28.02:28,0,178	0/1:5,8:13:99:245,0,148	0/1:7,5:12:57.81:58,0,237	0/0:9,1:10:12.07:0,12,335	0/0:11,0:11:33.10:0,33,446	0/0:15,0:15:45.15:0,45,628	0/0:16,0:16:45.10:0,45,590	0/0:22,0:22:63.15:0,63,829	0/1:5,5:10:71.96:72,0,160	0/1:1,5:6:9.86:122,0,10	1/1:0,2:2:3.01:38,3,0
chr10	77496544	.	GGT	G	408.19	PASS	AC=16;AF=0.800;AN=20;BaseQRankSum=-1.736;DP=37;FS=0.000;HRun=0;HaplotypeScore=8.8372;InbreedingCoeff=0.2329;MQ=47.43;MQ0=6;MQRankSum=-1.736;QD=25.51;ReadPosRankSum=-1.736;VQSLOD=3.1654;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:6,0:2:2.88:0,3,33	./.	0/0:0,2:2:0:0,0,0	./.	./.	1/1:0,4:4:11.97:139,12,0	1/1:0,1:1:3.01:48,3,0	1/1:1,1:1:3.01:48,3,0	./.	1/1:0,2:2:6.02:76,6,0	./.	./.	./.	1/1:2,0:1:2.97:20,3,0	1/1:0,2:2:3.01:41,3,0	./.	1/1:0,2:2:5.98:68,6,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:48,3,0
chr10	77498003	.	CTTT	C	10365.14	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-5.390;DP=590;FS=6.880;HRun=13;HaplotypeScore=103.7277;InbreedingCoeff=0.9000;MQ=63.56;MQ0=6;MQRankSum=-3.603;QD=24.39;ReadPosRankSum=2.357;VQSLOD=3.9480;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:39:99:0,102,1741	1/1:0,6:6:14.93:163,15,0	0/1:20,0:9:7.77:8,0,114	0/0:21,0:11:6.67:0,7,121	1/1:2,16:18:35.89:471,36,0	1/1:2,13:15:33.08:401,33,0	1/1:3,18:21:36.08:436,36,0	1/1:9,21:30:60.07:704,60,0	0/0:17,0:18:48.15:0,48,858	1/1:5,28:33:84.11:987,84,0	1/1:0,22:22:66.20:785,66,0	0/0:14,0:14:38.86:0,39,568	0/0:13,0:13:27.05:0,27,392	1/1:1,17:18:36.11:433,36,0	1/1:5,24:29:63.16:762,63,0	1/1:4,13:17:33.05:401,33,0	1/1:9,29:39:58.06:703,58,0	1/1:3,18:21:40.35:600,40,0	1/1:3,24:27:61.19:796,61,0	1/1:3,14:17:42.11:511,42,0	1/1:2,9:10:21.06:255,21,0	0/0:17,0:17:43.31:0,43,703	0/0:16,0:18:42.08:0,42,624	0/0:19,0:22:54.13:0,54,878	1/1:0,22:24:55.38:638,55,0	1/1:3,20:23:60.08:695,60,0	1/1:8,17:24:42.06:507,42,0	1/1:6,2:8:9.01:109,9,0
chr10	77499339	.	A	AAAAC	14439.29	PASS	AB=0.775;AC=32;AF=0.571;AN=56;BaseQRankSum=-15.370;DP=674;FS=0.000;HRun=0;HaplotypeScore=108.0736;InbreedingCoeff=0.8480;MQ=60.78;MQ0=10;MQRankSum=0.825;QD=39.78;ReadPosRankSum=0.005;VQSLOD=4.7351;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,99,1521	1/1:1,5:6:12.04:291,12,0	0/0:40,0:19:32.05:0,32,343	0/0:52,0:18:14.77:0,15,199	0/0:31,0:31:59.95:0,60,892	1/1:5,13:17:36.12:871,36,0	1/1:10,15:25:46.96:1106,47,0	1/1:8,21:28:52.63:874,53,0	0/1:14,0:14:17.96:18,0,154	1/1:9,19:29:63.14:1349,63,0	1/1:6,16:22:48.05:1066,48,0	0/0:21,0:21:54.03:0,54,514	0/0:22,0:22:48.09:0,48,482	0/1:2,8:11:28.20:415,0,28	0/0:18,0:18:33.07:0,33,428	1/1:2,12:14:24.08:581,24,0	1/1:3,25:28:54.19:1308,54,0	1/1:12,27:41:63.04:1414,63,0	1/1:7,16:20:50.97:845,51,0	1/1:6,8:16:29.94:614,30,0	1/1:5,13:19:33.11:799,33,0	0/0:15,0:15:33.05:0,33,327	0/0:25,0:25:52.24:0,52,500	0/0:23,0:23:43.13:0,43,601	0/0:20,0:20:39.04:0,39,558	1/1:3,24:28:75.20:1593,75,0	1/1:7,9:18:24.08:581,24,0	1/1:4,12:21:30.10:712,30,0
chr10	77500209	.	GCC	G	26825.43	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.793;DP=746;FS=5.572;HRun=3;HaplotypeScore=98.6624;InbreedingCoeff=0.9990;MQ=86.50;MQ0=0;MQRankSum=-8.024;QD=40.71;ReadPosRankSum=6.535;VQSLOD=4.2302;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,2020	1/1:0,13:13:29.79:459,30,0	0/0:26,0:26:67.93:0,68,1189	0/0:23,0:23:57.11:0,57,995	1/1:0,14:14:39:596,39,0	1/1:1,14:15:39.13:597,39,0	1/1:1,19:20:51.17:781,51,0	1/1:1,28:29:84.24:1196,84,0	1/1:0,32:32:90.31:1378,90,0	1/1:1,41:42:99:1818,123,0	1/1:0,29:29:63.21:952,63,0	1/1:1,32:33:87.30:1332,87,0	1/1:0,30:30:87.30:1331,87,0	1/1:0,37:37:99:1597,105,0	1/1:0,20:20:54.18:827,54,0	1/1:0,31:31:75.25:1148,75,0	1/1:0,34:34:93.32:1424,93,0	1/1:0,15:15:42.14:643,42,0	1/1:0,22:22:66.21:988,66,0	1/1:0,30:30:78.20:1193,78,0	1/1:2,41:43:99:1653,108,0	1/1:0,23:23:60.20:918,60,0	1/1:0,23:23:51.17:780,51,0	1/1:0,20:20:57.19:873,57,0	1/1:0,22:22:60.20:919,60,0	1/1:0,40:40:99:1772,117,0	1/1:0,29:29:84.29:1286,84,0	1/1:0,13:13:24.08:367,24,0
chr10	77500473	.	AG	A	3058.15	PASS	AB=0.956;AC=44;AF=0.786;AN=56;BaseQRankSum=1.880;DP=446;FS=0.692;HRun=12;HaplotypeScore=70.1849;InbreedingCoeff=0.6453;MQ=62.15;MQ0=17;MQRankSum=-2.778;QD=8.92;ReadPosRankSum=1.273;VQSLOD=2.7871;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:23.49:0,23,201	1/1:1,3:4:7.22:49,7,0	0/1:28,1:8:4.08:4,0,56	0/0:26,0:13:5.67:0,6,35	0/0:9,0:9:2.67:0,3,11	1/1:4,8:13:29.56:217,30,0	1/1:6,10:17:25.92:191,26,0	1/1:9,4:11:8.94:69,9,0	1/1:11,6:17:29.46:208,29,0	1/1:11,5:18:27.23:168,27,0	1/1:4,4:10:17.79:125,18,0	0/0:16,0:15:16.10:0,16,82	1/1:9,8:17:26.24:184,26,0	1/1:8,7:15:26.02:172,26,0	0/1:16,1:17:21.74:22,0,61	1/1:9,6:16:17.70:178,18,0	1/1:5,17:22:35.85:278,36,0	1/1:4,22:26:59.14:438,59,0	1/1:4,5:9:11.23:112,11,0	1/1:4,4:8:8.95:69,9,0	1/1:7,12:19:17.89:139,18,0	1/1:3,7:10:8.94:69,9,0	1/1:8,1:8:5.90:40,6,0	1/1:8,15:22:29.63:221,30,0	0/0:22,0:22:20.30:0,20,117	1/1:10,6:18:27.15:171,27,0	1/1:7,2:9:13.95:83,14,0	1/1:0,1:1:2.99:23,3,0
chr10	77500677	.	A	AGG	1182.18	PASS	AB=0.608;AC=7;AF=0.125;AN=56;BaseQRankSum=6.190;DP=413;FS=13.474;HRun=4;HaplotypeScore=50.5899;InbreedingCoeff=0.1834;MQ=60.87;MQ0=35;MQRankSum=-1.953;QD=24.13;ReadPosRankSum=1.021;VQSLOD=0.8050;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:38.63:0,39,589	0/0:8,0:7:15.03:0,15,184	0/0:12,0:9:14.76:0,15,154	0/0:18,0:10:16.19:0,16,170	0/0:15,0:12:36.12:0,36,480	0/0:16,0:15:30.10:0,30,400	0/0:11,0:8:24.01:0,24,298	0/0:18,0:14:33.11:0,33,440	0/1:5,10:13:9.89:404,0,10	0/0:15,0:15:36.12:0,36,480	0/0:14,0:14:36.12:0,36,480	0/1:3,4:6:24.84:199,0,25	0/1:1,5:5:24.95:201,0,25	0/0:8,0:7:15.05:0,15,200	0/0:17,0:14:30.10:0,30,398	0/0:11,0:9:27.09:0,27,360	0/0:40,0:36:72.17:0,72,931	0/0:26,0:23:54.15:0,54,700	0/0:10,0:7:15.05:0,15,200	0/0:14,0:14:27.08:0,27,354	0/0:15,0:12:18.06:0,18,240	0/1:1,3:4:30.86:99,0,31	0/1:6,5:9:48.75:198,0,49	1/1:2,4:5:12.04:216,12,0	0/0:11,0:11:33.11:0,33,439	0/0:24,0:19:51.16:0,51,664	0/0:17,0:17:45.15:0,45,596	0/0:14,0:10:30.04:0,30,379
chr10	77500982	.	CACATGGTG	C	8833.10	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.558;DP=314;FS=9.621;HRun=0;HaplotypeScore=70.3079;InbreedingCoeff=0.5987;MQ=50.88;MQ0=33;MQRankSum=-6.845;QD=38.40;ReadPosRankSum=0.927;VQSLOD=3.2192;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:78.25:0,78,3216	1/1:2,5:7:12.04:325,12,0	0/0:24,0:3:6:0,6,119	0/0:29,0:7:13.86:0,14,322	1/1:1,7:6:9.03:243,9,0	1/1:3,8:11:24.08:650,24,0	1/1:4,8:8:6.02:161,6,0	1/1:6,6:9:9.02:191,9,0	1/1:0,12:12:27.09:732,27,0	1/1:4,6:10:18.05:401,18,0	1/1:0,7:7:12.04:325,12,0	1/1:2,5:7:15.05:407,15,0	1/1:2,3:5:9.03:244,9,0	1/1:2,7:8:6.02:163,6,0	1/1:1,9:10:18.06:488,18,0	1/1:1,10:11:27.09:726,27,0	1/1:5,8:13:5.61:162,6,0	1/1:2,4:6:3.01:81,3,0	1/1:6,3:7:12.01:262,12,0	1/1:0,6:6:12.04:325,12,0	1/1:3,2:5:3.01:80,3,0	1/1:0,5:5:9.03:244,9,0	1/1:2,5:7:9.02:244,9,0	1/1:3,5:8:3.01:81,3,0	1/1:2,7:9:15.05:381,15,0	1/1:4,14:16:30.10:777,30,0	1/1:0,16:14:33.11:895,33,0	1/1:0,6:6:9.03:244,9,0
chr10	77501110	.	TG	T	3469.79	PASS	AB=0.888;AC=43;AF=0.768;AN=56;BaseQRankSum=4.156;DP=366;FS=6.883;HRun=2;HaplotypeScore=81.1862;InbreedingCoeff=0.2560;MQ=54.38;MQ0=25;MQRankSum=3.013;QD=11.16;ReadPosRankSum=1.072;VQSLOD=1.6550;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:58.48:0,58,678	1/1:3,4:7:14.81:152,15,0	0/0:12,0:5:15.04:0,15,180	0/0:21,0:7:8.93:0,9,94	0/1:10,1:11:37.23:87,0,37	1/1:15,4:17:36.12:228,36,0	1/1:18,3:19:45.34:281,45,0	0/1:15,0:15:35.89:128,0,36	1/1:7,3:10:4.59:89,5,0	0/1:10,3:12:0.50:250,0,1	1/1:7,1:6:12.94:72,13,0	0/1:7,1:6:15.21:20,0,15	0/1:4,2:6:17.38:29,0,17	1/1:9,5:13:19.74:148,20,0	0/1:14,1:14:31.76:46,0,32	1/1:4,7:11:25.50:220,25,0	1/1:9,11:20:33.36:327,33,0	1/1:11,4:15:19.68:141,20,0	1/1:17,2:16:24.77:121,25,0	1/1:7,6:11:22.86:190,23,0	1/1:13,0:11:16.89:68,17,0	1/1:1,1:2:3:25,3,0	1/1:2,3:5:8.99:74,9,0	1/1:5,2:7:9.93:61,10,0	1/1:9,2:11:24.30:158,24,0	0/1:19,2:18:16.39:125,0,16	1/1:13,5:16:35.56:306,36,0	1/1:7,2:9:19.49:122,19,0
chr10	77501114	.	GT	G	2769.11	PASS	AB=0.910;AC=42;AF=0.750;AN=56;BaseQRankSum=3.665;DP=378;FS=5.418;HRun=1;HaplotypeScore=85.3903;InbreedingCoeff=0.1924;MQ=53.50;MQ0=29;MQRankSum=4.764;QD=8.60;ReadPosRankSum=2.627;VQSLOD=1.2407;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:52.70:0,53,621	1/1:3,4:7:16.01:167,16,0	0/0:12,0:5:15.04:0,15,180	0/0:21,0:7:8.97:0,9,84	0/1:11,1:12:27.27:27,0,48	1/1:15,3:17:7.12:181,7,0	1/1:16,2:17:42.20:244,42,0	0/1:16,0:16:20.55:105,0,21	1/1:6,0:9:6.19:30,6,0	1/1:13,3:15:18.35:295,18,0	1/1:8,1:7:18.46:106,18,0	0/1:7,0:5:3.04:3,0,12	0/1:4,0:6:14.50:14,0,17	1/1:10,2:13:21.07:140,21,0	0/1:15,1:14:38.74:39,0,243	1/1:3,5:10:25.51:223,26,0	1/1:11,10:21:38.74:353,39,0	1/1:12,3:16:10.80:173,11,0	1/1:19,0:17:3.53:78,4,0	1/1:8,4:12:22.90:170,23,0	0/1:15,0:12:4.62:53,0,5	1/1:1,0:2:2.50:9,2,0	1/1:2,0:5:7.46:26,7,0	1/1:7,0:7:7.23:29,7,0	0/1:12,2:14:43.40:111,0,43	0/1:17,2:16:33.23:103,0,33	1/1:13,4:16:26.70:217,27,0	1/1:6,0:8:5.71:39,6,0
chr10	77501124	.	GT	G	392.55	PASS	AB=0.751;AC=8;AF=0.143;AN=56;BaseQRankSum=0.827;DP=411;FS=10.885;HRun=1;HaplotypeScore=97.3223;InbreedingCoeff=0.3074;MQ=47.77;MQ0=33;MQRankSum=-3.965;QD=7.70;ReadPosRankSum=-1.190;VQSLOD=-0.4896;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:53.47:0,53,624	0/0:9,0:9:25.06:0,25,226	0/0:10,0:2:6.02:0,6,76	0/0:25,0:7:15.52:0,16,189	0/0:14,0:14:21.68:0,22,218	0/0:17,0:15:32.95:0,33,320	0/0:20,0:18:43.90:0,44,443	0/0:13,0:13:33.99:0,34,421	0/1:8,5:12:99:176,0,106	0/0:17,0:16:44.85:0,45,385	0/0:10,0:8:17.53:0,18,120	0/1:7,3:7:36.24:114,0,36	0/1:6,2:7:42.30:42,0,63	0/0:14,0:13:20.63:0,21,180	0/0:16,0:14:38.33:0,38,504	0/0:10,0:10:19.22:0,19,124	0/0:22,0:21:48.50:0,49,385	0/0:16,0:16:25.45:0,25,370	0/0:17,1:14:15.77:0,16,313	0/0:13,0:11:18.36:0,18,119	0/0:19,0:16:30.08:0,30,386	1/1:2,1:3:3.01:31,3,0	1/1:5,2:6:12.03:134,12,0	0/1:6,4:8:31.01:31,0,67	0/0:18,0:18:32.90:0,33,335	0/0:22,0:19:47.22:0,47,543	0/0:21,0:19:30.06:0,30,267	0/0:11,0:11:28.82:0,29,310
chr10	77501434	.	T	TA	14524.13	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-3.421;DP=429;FS=7.335;HRun=0;HaplotypeScore=70.3494;InbreedingCoeff=0.9824;MQ=82.14;MQ0=2;MQRankSum=-7.404;QD=39.79;ReadPosRankSum=0.798;VQSLOD=5.1552;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.23:0,75,1010	1/1:0,6:6:18.06:286,18,0	0/0:22,0:18:51.10:0,51,662	0/0:17,0:12:32.97:0,33,403	1/1:0,12:12:29.99:443,30,0	1/1:0,11:12:36.05:536,36,0	1/1:0,20:20:54.18:859,54,0	1/1:0,33:33:96.31:1509,96,0	1/1:2,16:18:39.13:620,39,0	1/1:0,6:6:18.06:287,18,0	1/1:0,6:6:15.05:227,15,0	1/1:0,17:17:45.08:678,45,0	1/1:1,13:15:39.13:611,39,0	1/1:1,20:22:57.19:899,57,0	1/1:1,18:20:45.08:678,45,0	1/1:1,9:10:27.09:430,27,0	1/1:0,19:19:57.09:877,57,0	1/1:0,15:15:45.15:718,45,0	1/1:1,13:14:36.10:547,36,0	1/1:1,12:14:33.11:510,33,0	1/1:0,13:15:36.08:533,36,0	1/1:0,9:9:21.07:335,21,0	1/1:0,7:7:18.01:258,18,0	1/1:0,18:18:42.06:617,42,0	1/1:0,12:12:27.09:426,27,0	1/1:2,19:20:60.10:810,60,0	1/1:0,13:13:27.02:401,27,0	1/1:1,10:11:27.09:429,27,0
chr10	77502220	.	TTC	T	1017.62	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=9.541;DP=600;FS=4.399;HRun=0;HaplotypeScore=72.1242;InbreedingCoeff=0.9061;MQ=57.38;MQ0=16;MQRankSum=-1.661;QD=7.71;ReadPosRankSum=-2.155;VQSLOD=2.6900;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.12:0,81,1158	0/0:10,0:10:30.08:0,30,452	0/1:21,0:6:3.71:4,0,37	0/0:30,0:10:9.15:0,9,170	0/0:30,0:30:86.90:0,87,1179	0/0:25,0:25:72.05:0,72,1068	0/0:13,0:13:38.86:0,39,473	0/0:29,0:29:70.37:0,70,922	1/1:15,1:15:16.95:81,17,0	0/0:25,0:25:75.20:0,75,1037	0/0:19,0:19:50.98:0,51,756	1/1:18,0:16:14.28:100,14,0	1/1:20,0:19:45.33:288,45,0	0/0:14,0:14:42.13:0,42,610	0/0:19,0:19:57.17:0,57,871	0/0:25,0:25:69:0,69,1003	0/0:23,0:23:63.10:0,63,928	0/0:37,0:35:78.94:0,79,1211	0/0:24,0:22:66.15:0,66,882	0/0:27,0:27:80.66:0,81,1023	0/0:5,0:5:15.03:0,15,206	1/1:19,1:20:30.77:314,31,0	1/1:19,2:20:35.63:335,36,0	1/1:16,0:14:16.96:81,17,0	0/0:18,0:18:51.12:0,51,731	0/0:25,0:24:61.99:0,62,873	0/0:31,0:31:86.99:0,87,1169	0/0:9,0:9:21.03:0,21,277
chr10	77502221	.	TC	T	2011.94	PASS	AB=0.952;AC=13;AF=0.232;AN=56;BaseQRankSum=8.275;DP=604;FS=5.883;HRun=1;HaplotypeScore=59.0842;InbreedingCoeff=0.9308;MQ=57.28;MQ0=18;MQRankSum=0.545;QD=15.24;ReadPosRankSum=-2.181;VQSLOD=2.5222;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.10:0,81,927	0/0:11,0:11:33.06:0,33,375	0/1:19,1:6:1.13:1,0,42	0/0:30,0:10:20.40:0,20,165	0/0:33,0:33:80.10:0,80,913	0/0:25,0:25:69:0,69,809	0/0:14,0:14:36:0,36,383	0/0:29,0:29:64.21:0,64,714	1/1:3,14:15:18.06:248,18,0	0/0:25,0:25:75.11:0,75,833	0/0:19,0:18:48.07:0,48,572	1/1:2,16:16:15.04:189,15,0	1/1:12,8:19:53.31:509,53,0	0/0:15,0:15:41.99:0,42,472	0/0:19,0:19:57.15:0,57,684	0/0:24,0:24:66.14:0,66,779	0/0:24,0:24:62.89:0,63,722	0/0:37,0:35:78.72:0,79,961	0/0:25,0:23:65.91:0,66,694	0/0:27,0:27:73.24:0,73,823	0/0:5,0:5:14.99:0,15,157	1/1:11,9:20:49.48:495,49,0	1/1:11,10:19:48.44:506,48,0	1/1:2,14:14:18.06:248,18,0	0/0:18,0:18:51.11:0,51,588	0/0:24,0:23:59.99:0,60,695	0/0:31,0:31:86.84:0,87,914	0/0:7,0:7:20.96:0,21,222
chr10	77503182	.	CAA	C	1915.68	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.084;DP=535;FS=0.524;HRun=10;HaplotypeScore=77.0483;InbreedingCoeff=0.9950;MQ=75.05;MQ0=2;MQRankSum=-1.490;QD=21.05;ReadPosRankSum=2.830;VQSLOD=2.9343;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:77.74:0,78,1177	0/0:11,0:11:30.09:0,30,455	0/0:20,0:16:33.09:0,33,484	0/0:15,0:14:16.70:0,17,175	0/0:3,0:17:43.78:0,44,378	0/0:20,0:20:45.14:0,45,692	0/0:16,0:16:42.14:0,42,664	0/0:24,0:24:69.23:0,69,1055	1/1:4,9:13:24.06:266,24,0	0/0:20,0:20:57.18:0,57,867	0/0:18,0:18:42.14:0,42,644	1/1:0,16:14:39.11:435,39,0	1/1:1,12:13:27.06:301,27,0	0/0:15,0:15:36.02:0,36,514	0/0:3,0:18:45.07:0,45,428	0/0:18,0:18:42.13:0,42,633	0/0:34,0:35:95.80:0,96,1460	0/0:18,0:18:51.09:0,51,753	0/0:29,0:30:69.20:0,69,1013	0/0:18,0:18:42.13:0,42,640	0/0:16,0:17:42.13:0,42,623	1/1:4,13:17:33.07:368,33,0	1/1:2,8:10:17.89:198,18,0	1/1:3,19:22:48.12:535,48,0	0/0:3,0:20:51.08:0,51,484	0/0:32,0:32:75.19:0,75,1096	0/0:21,0:21:48.15:0,48,738	0/0:10,0:10:27.03:0,27,356
chr10	77503420	.	CAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	C	1193.51	PASS	AB=1.000;AC=7;AF=0.140;AN=50;BaseQRankSum=-2.096;DP=385;FS=16.075;HRun=0;HaplotypeScore=245.6439;InbreedingCoeff=0.4822;MQ=34.07;MQ0=122;MQRankSum=-2.517;QD=18.65;ReadPosRankSum=3.346;VQSLOD=1.2111;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:23:21.06:0,21,1628	0/0:2,0:2:3.01:0,3,148	./.	./.	0/0:9,0:7:8.48:0,8,210	0/0:16,0:13:14.52:0,15,830	0/0:22,0:11:11.30:0,11,319	./.	0/1:15,0:9:99:504,0,359	0/0:13,0:9:20.90:0,21,669	0/0:13,0:12:23.27:0,23,359	1/1:15,0:13:3.01:204,3,0	1/1:12,0:7:9.03:396,9,0	0/0:16,0:11:14.78:0,15,578	0/0:14,0:9:11.17:0,11,47	0/0:9,0:5:3.01:0,3,329	0/0:20,0:15:30.10:0,30,2451	0/0:18,0:13:15.05:0,15,1050	0/0:16,0:6:9.03:0,9,375	0/0:9,0:9:16.65:0,17,127	0/0:28,0:19:11.25:0,11,337	0/0:7,3:8:3.01:0,3,324	0/0:8,6:11:0.94:0,1,2	1/1:22,0:6:6.02:209,6,0	0/0:14,0:10:16.31:0,16,71	0/0:8,0:5:9.03:0,9,403	0/0:11,0:9:14.64:0,15,490	0/0:11,0:4:8.39:0,8,455
chr10	77503440	.	G	GT	273.60	PASS	AB=0.750;AC=7;AF=0.146;AN=48;BaseQRankSum=3.420;DP=355;FS=3.450;HRun=0;HaplotypeScore=68.3517;InbreedingCoeff=0.5151;MQ=32.76;MQ0=117;MQRankSum=-4.915;QD=5.70;ReadPosRankSum=1.016;VQSLOD=3.0002;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:18:21.06:0,21,274	0/0:2,0:2:3.01:0,3,41	./.	./.	0/0:9,0:8:8.97:0,9,81	0/0:14,0:10:12.01:0,12,141	0/0:28,0:17:24.28:0,24,316	./.	0/1:8,4:6:29.28:130,0,29	0/0:13,0:9:26.14:0,26,270	0/0:15,0:14:16.27:0,16,149	1/1:5,2:5:3.01:47,3,0	1/1:6,3:4:9.03:131,9,0	0/0:16,0:10:16.78:0,17,182	0/0:15,0:10:10.28:0,10,64	0/0:9,0:5:12.04:0,12,169	0/0:19,0:14:33.11:0,33,453	0/0:20,0:14:33.08:0,33,435	0/0:9,0:4:12.04:0,12,166	0/0:8,0:8:12.06:0,12,76	0/0:27,1:19:21.58:0,22,283	0/0:7,0:5:3.01:0,3,42	./.	1/1:15,5:4:6.02:87,6,0	0/0:15,0:11:12.32:0,12,73	0/0:12,0:9:23.74:0,24,275	0/0:14,0:12:13.79:0,14,179	0/0:12,0:4:3.72:0,4,53
chr10	77504649	.	G	GTGAA	8849.22	PASS	AB=0.966;AC=13;AF=0.232;AN=56;BaseQRankSum=17.763;DP=826;FS=14.960;HRun=0;HaplotypeScore=161.1976;InbreedingCoeff=0.8745;MQ=54.37;MQ0=2;MQRankSum=-12.519;QD=38.81;ReadPosRankSum=-1.796;VQSLOD=3.8747;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,117,2017	0/0:7,0:7:15.04:0,15,228	0/0:25,0:15:10.23:0,10,332	0/0:22,0:15:7.41:0,7,346	0/0:25,0:25:66.19:0,66,1062	0/0:23,0:23:57.11:0,57,844	0/0:29,0:29:75.26:0,75,1301	0/0:41,0:41:99:0,102,1556	1/1:20,21:40:99:1899,99,0	0/0:44,0:44:99:0,107,1780	0/0:17,0:17:48.08:0,48,709	1/1:21,22:43:99:2042,108,0	1/1:11,18:28:72.19:1572,72,0	0/0:41,0:41:93.25:0,93,1474	0/0:40,0:40:99:0,108,1691	0/1:27,1:28:41.63:42,0,1018	0/0:34,0:34:90.21:0,90,1400	0/0:19,0:19:54.13:0,54,835	0/0:17,0:16:36.03:0,36,491	0/0:21,0:21:60.19:0,60,1000	0/0:44,0:44:99:0,120,1925	1/1:10,15:25:62.97:1258,63,0	1/1:12,14:26:48.05:1005,48,0	1/1:19,17:36:55.71:1033,56,0	0/0:29,0:29:69.22:0,69,1159	0/0:33,0:33:90.28:0,90,1489	0/0:24,0:24:63.20:0,63,1034	0/0:20,0:20:57.20:0,57,979
chr10	77504680	.	C	CATGA	8085.05	PASS	AB=0.931;AC=13;AF=0.232;AN=56;BaseQRankSum=8.062;DP=812;FS=22.409;HRun=0;HaplotypeScore=153.0867;InbreedingCoeff=0.8990;MQ=57.93;MQ0=0;MQRankSum=-10.413;QD=39.83;ReadPosRankSum=2.514;VQSLOD=3.6886;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,117,1934	0/0:7,0:7:21.06:0,21,336	0/0:20,0:17:42.01:0,42,543	0/0:23,0:20:42.37:0,42,665	0/0:29,0:29:74.47:0,74,1245	0/0:20,0:20:57.12:0,57,849	0/0:34,0:34:87.25:0,87,1419	0/0:47,0:47:96.22:0,96,1458	1/1:10,29:36:81.28:2020,81,0	0/0:42,0:42:99:0,105,1683	0/0:21,0:21:57.16:0,57,921	1/1:11,27:41:90.14:1985,90,0	1/1:6,18:24:57.12:1250,57,0	0/0:35,0:35:96.27:0,96,1569	0/0:42,0:42:99:0,114,1859	0/1:25,2:27:78.92:79,0,980	0/0:27,0:27:42.54:0,43,1184	0/0:20,0:20:54.12:0,54,865	0/0:21,0:21:48.13:0,48,796	0/0:23,0:23:63.17:0,63,995	0/0:36,0:36:85.90:0,86,1452	1/1:5,14:19:42.14:1045,42,0	1/1:5,11:18:33.50:694,33,0	1/1:8,21:34:45.96:1013,46,0	0/0:27,0:27:63.20:0,63,1042	0/0:36,0:36:75.25:0,75,1262	0/0:25,0:24:66.18:0,66,1057	0/0:25,0:25:72.16:0,72,1104
chr10	77504926	.	A	AAC	2090.33	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-6.371;DP=476;FS=16.325;HRun=0;HaplotypeScore=57.5492;InbreedingCoeff=0.9487;MQ=68.43;MQ0=0;MQRankSum=0.770;QD=34.84;ReadPosRankSum=1.006;VQSLOD=4.0930;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:79.16:0,79,958	0/0:6,0:6:18.06:0,18,251	0/0:9,0:8:24.03:0,24,286	0/0:9,0:6:3.21:0,3,102	0/0:18,0:18:47.07:0,47,606	0/0:21,0:21:62.16:0,62,748	0/0:11,0:11:29.75:0,30,351	0/0:25,0:25:69.07:0,69,803	1/1:0,13:13:21.07:383,21,0	0/0:26,0:25:72.02:0,72,903	0/0:22,0:22:60.73:0,61,759	1/1:1,9:12:17.09:279,17,0	1/1:0,8:8:24.08:438,24,0	0/0:13,0:13:36.09:0,36,452	0/0:11,0:11:30.09:0,30,403	0/0:13,0:13:36.02:0,36,458	0/0:34,0:34:99:0,99,1222	0/0:25,0:25:66.06:0,66,772	0/0:17,0:17:49.38:0,49,623	0/0:23,0:23:61.27:0,61,759	0/0:12,0:12:36.02:0,36,416	1/1:0,11:11:33.01:558,33,0	1/1:1,9:10:26.96:452,27,0	1/1:0,6:6:9.03:164,9,0	0/0:16,0:16:42.77:0,43,571	0/0:27,0:27:78.09:0,78,978	0/0:20,0:19:54.03:0,54,668	0/0:26,0:26:73.65:0,74,911
chr10	77505499	.	CGTGTGT	C	512.51	PASS	AB=0.971;AC=17;AF=0.354;AN=48;BaseQRankSum=4.497;DP=557;FS=5.456;HRun=0;HaplotypeScore=108.6004;InbreedingCoeff=0.1980;MQ=54.27;MQ0=17;MQRankSum=-2.107;QD=2.21;ReadPosRankSum=0.152;VQSLOD=1.8563;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:24.08:0,24,613	1/1:10,1:10:3.01:60,3,0	./.	0/0:32,0:14:0:0,0,0	0/0:15,0:14:18.06:0,18,458	0/0:15,0:15:12.04:0,12,199	0/0:14,0:16:8.16:0,8,141	0/0:28,0:27:3.59:0,4,10	0/1:19,0:20:30.38:30,0,36	0/0:25,0:27:3.81:0,4,21	1/1:16,2:18:3:33,3,0	0/0:19,4:23:2.96:0,3,19	1/1:19,0:18:2.84:60,3,0	./.	0/0:13,0:13:15.05:0,15,396	1/1:18,0:22:0.74:2,1,0	0/1:24,1:26:13.09:55,0,13	1/1:12,0:13:2.71:59,3,0	0/1:17,0:16:36.72:53,0,37	0/1:23,0:22:18.87:19,0,36	0/0:23,3:26:2.51:0,3,17	./.	0/0:14,2:16:0:0,0,0	1/1:17,8:25:12.51:223,13,0	0/0:13,0:13:15.05:0,15,411	0/1:36,1:37:38.26:54,0,38	0/0:17,0:17:0.47:0,0,2	./.
chr10	77506065	.	GTGTGTGTGTGTGTC	G	6899.59	PASS	AB=0.988;AC=30;AF=0.536;AN=56;BaseQRankSum=8.744;DP=717;FS=7.425;HRun=0;HaplotypeScore=301.6605;InbreedingCoeff=0.1954;MQ=53.45;MQ0=7;MQRankSum=-7.567;QD=15.23;ReadPosRankSum=5.746;VQSLOD=2.2763;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,99,5631	0/1:8,0:8:33.72:56,0,34	0/0:30,0:11:17.29:0,17,415	0/0:38,0:24:53.21:0,53,1437	1/1:16,0:16:3.01:34,3,0	1/1:16,6:22:27.09:734,27,0	1/1:27,1:28:17.40:241,17,0	0/1:25,0:25:99:199,0,327	0/0:35,0:35:45.14:0,45,1862	1/1:24,1:25:0.88:481,1,0	1/1:12,1:13:0.10:0,0,0	0/0:52,0:52:48.33:0,48,1939	0/1:16,0:16:45.07:45,0,508	1/1:28,0:28:11.14:616,11,0	0/1:36,0:36:34.92:615,0,35	1/1:21,1:22:39.13:844,39,0	0/1:28,0:28:86.36:330,0,86	0/1:26,0:26:24.92:270,0,25	0/1:17,1:17:57.20:303,0,57	1/1:19,0:19:21.54:401,22,0	0/1:49,1:49:7.21:75,0,7	0/0:21,0:21:21.95:0,22,772	0/0:14,0:14:17.63:0,18,471	0/0:33,0:33:24.23:0,24,709	1/1:20,0:20:15.05:302,15,0	0/1:27,0:27:13.93:666,0,14	0/1:20,1:21:23.99:567,0,24	1/1:5,0:5:6.02:120,6,0
chr10	77506067	.	GTGTGTGTGTGTC	G	12312.62	PASS	AB=0.789;AC=37;AF=0.661;AN=56;BaseQRankSum=3.674;DP=692;FS=8.837;HRun=0;HaplotypeScore=252.5662;InbreedingCoeff=0.6838;MQ=53.61;MQ0=7;MQRankSum=-6.484;QD=28.37;ReadPosRankSum=3.544;VQSLOD=2.5079;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,99,4882	1/1:3,5:8:6.02:160,6,0	0/0:29,0:10:15.77:0,16,337	0/0:37,0:24:45.58:0,46,1218	1/1:6,9:15:5.91:51,6,0	1/1:9,13:22:27.09:826,27,0	1/1:10,18:28:15.05:457,15,0	0/1:18,5:23:96.55:492,0,97	0/0:34,0:34:42.13:0,42,1480	1/1:8,17:25:47.80:854,48,0	1/1:4,9:13:6.02:72,6,0	0/0:50,0:50:48.33:0,48,1569	0/1:16,1:17:93.09:93,0,392	1/1:10,17:27:33.11:1169,33,0	1/1:15,20:35:33.11:1102,33,0	1/1:6,16:22:39.13:1384,39,0	0/1:9,18:27:23.62:673,0,24	1/1:8,15:23:12.04:415,12,0	1/1:10,8:17:26.75:527,27,0	1/1:3,15:18:27.01:741,27,0	1/1:18,28:45:11.77:168,12,0	0/0:21,0:21:24.89:0,25,694	0/0:13,0:13:14.57:0,15,336	0/0:33,0:33:23.01:0,23,517	1/1:4,13:17:15.05:542,15,0	1/1:8,18:26:51.01:1420,51,0	1/1:6,13:19:26.99:951,27,0	1/1:3,2:5:6.02:216,6,0
chr10	77506088	.	T	TGTGTGC	2406.32	PASS	AB=0.740;AC=11;AF=0.196;AN=56;BaseQRankSum=-2.551;DP=566;FS=0.633;HRun=0;HaplotypeScore=189.2970;InbreedingCoeff=0.1840;MQ=54.18;MQ0=5;MQRankSum=-4.758;QD=11.62;ReadPosRankSum=1.291;VQSLOD=2.7137;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.28:0,93,1876	0/1:6,0:6:3.08:3,0,65	0/1:13,0:4:17.36:18,0,17	0/0:17,0:8:1.86:0,2,33	0/0:9,0:9:5.90:0,6,37	0/0:24,0:24:41.85:0,42,462	0/0:23,0:23:26.86:0,27,248	0/1:16,0:16:9.53:10,0,139	1/1:4,26:35:32.90:948,33,0	0/0:21,0:21:36.99:0,37,410	0/0:10,0:10:5.77:0,6,31	0/1:5,39:47:54.10:813,0,54	0/1:3,1:19:36.59:245,0,37	0/0:20,0:20:38.35:0,38,476	0/0:25,0:26:42.02:0,42,548	0/0:18,0:18:44.79:0,45,590	0/0:22,0:22:7.35:0,7,287	0/0:20,0:20:22.97:0,23,229	0/0:14,0:13:33.22:0,33,312	0/0:15,0:15:26.88:0,27,346	0/0:35,0:34:15.25:0,15,101	0/1:4,14:22:39.11:200,0,39	0/1:3,6:14:0.92:206,0,1	1/1:4,27:35:3.01:108,3,0	0/0:13,0:13:15.05:0,15,229	0/0:20,0:20:37.19:0,37,501	0/0:17,0:17:35.94:0,36,491	0/0:2,0:2:6.02:0,6,98
chr10	77507309	.	ATG	A	5338.54	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.934;DP=761;FS=4.215;HRun=0;HaplotypeScore=97.8926;InbreedingCoeff=0.9981;MQ=81.96;MQ0=1;MQRankSum=-0.104;QD=33.58;ReadPosRankSum=1.333;VQSLOD=7.2328;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,2555	0/0:10,0:10:27.09:0,27,479	0/0:23,0:23:60.16:0,60,1038	0/0:30,0:30:57.33:0,57,1146	0/0:18,0:18:42.14:0,42,744	0/0:28,0:28:75.26:0,75,1325	0/0:34,0:34:90.29:0,90,1569	0/0:29,0:29:84.28:0,84,1450	1/1:1,24:25:69.23:948,69,0	0/0:39,0:39:99:0,108,1906	0/0:18,0:18:51.16:0,51,873	1/1:2,31:32:72.24:990,72,0	1/1:2,25:27:69.23:948,69,0	0/0:24,0:24:66.23:0,66,1171	0/0:39,0:39:99:0,111,1963	0/0:34,0:34:99:0,99,1757	0/0:23,0:23:69.24:0,69,1214	0/0:12,0:12:36.12:0,36,639	0/0:21,0:21:60.20:0,60,1029	0/0:28,0:28:81.28:0,81,1424	0/0:49,0:49:99:0,132,2285	1/1:3,21:24:54.14:721,54,0	1/1:1,22:23:57.08:783,57,0	1/1:0,27:27:69.23:948,69,0	0/0:25,0:25:69.24:0,69,1211	0/0:30,0:30:84.25:0,84,1386	0/0:31,0:31:90.31:0,90,1589	0/0:6,0:6:18.06:0,18,319
chr10	77507703	.	CG	C	7184.37	PASS	AB=1.000;AC=55;AF=0.982;AN=56;BaseQRankSum=4.360;DP=360;FS=1.555;HRun=1;HaplotypeScore=187.6680;InbreedingCoeff=-0.0275;MQ=55.38;MQ0=0;MQRankSum=-4.738;QD=19.96;ReadPosRankSum=4.789;VQSLOD=5.0797;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,17:22:29.07:217,29,0	1/1:0,12:12:35.91:296,36,0	1/1:5,0:5:13.09:67,13,0	0/1:11,0:11:21.63:85,0,22	1/1:0,11:11:27.01:244,27,0	1/1:0,11:11:32.98:286,33,0	1/1:2,14:16:41.98:368,42,0	1/1:6,22:27:52.50:540,52,0	1/1:1,9:10:26.85:220,27,0	1/1:2,23:25:35.78:501,36,0	1/1:2,11:13:29.83:251,30,0	1/1:1,10:10:26.97:229,27,0	1/1:1,9:10:26.92:222,27,0	1/1:1,12:13:13.96:276,14,0	1/1:0,9:9:26.98:229,27,0	1/1:2,14:16:45.81:375,46,0	1/1:2,12:14:29:235,29,0	1/1:0,8:8:20.94:166,21,0	1/1:1,14:14:11.82:261,12,0	1/1:1,12:13:34.16:264,34,0	1/1:0,9:9:23.94:189,24,0	1/1:1,10:11:26:208,26,0	1/1:0,12:12:34.82:299,35,0	1/1:0,4:4:2.98:28,3,0	1/1:1,11:12:11.52:230,12,0	1/1:0,13:13:38.89:331,39,0	1/1:0,16:16:44.91:369,45,0	1/1:2,8:10:26.38:200,26,0
chr10	77507786	.	GA	G	3150.16	PASS	AB=0.930;AC=44;AF=0.880;AN=50;BaseQRankSum=1.895;DP=261;FS=11.763;HRun=2;HaplotypeScore=125.9857;InbreedingCoeff=-0.0246;MQ=26.54;MQ0=2;MQRankSum=-0.910;QD=12.16;ReadPosRankSum=6.059;VQSLOD=1.1442;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:9:6.43:45,6,0	1/1:10,0:8:14.81:107,15,0	./.	./.	0/1:5,1:6:5.01:89,0,5	1/1:8,1:7:11.97:105,12,0	1/1:16,0:10:26.88:203,27,0	1/1:21,0:17:41.67:294,42,0	1/1:4,0:4:8.97:69,9,0	1/1:14,0:13:36.18:255,36,0	0/1:10,1:11:23.81:84,0,24	1/1:10,0:6:11.92:87,12,0	1/1:8,0:7:17.92:134,18,0	1/1:10,0:9:23.92:187,24,0	1/1:8,0:7:11.93:87,12,0	1/1:13,0:11:19.98:154,20,0	1/1:14,0:14:10.03:180,10,0	1/1:5,0:5:8.94:77,9,0	1/1:19,0:17:17.63:233,18,0	0/1:12,1:9:5.65:96,0,6	0/1:5,0:4:11.01:36,0,11	0/1:6,1:7:5.04:87,0,5	1/1:4,1:4:5.96:43,6,0	0/1:2,0:2:0:0,0,0	1/1:10,0:9:17.89:132,18,0	1/1:17,1:16:34.52:284,35,0	1/1:10,0:9:23.90:188,24,0	./.
chr10	77507818	.	GC	G	1503.57	PASS	AB=0.582;AC=47;AF=0.940;AN=50;BaseQRankSum=-0.027;DP=180;FS=5.635;HRun=1;HaplotypeScore=61.4116;InbreedingCoeff=-0.0590;MQ=42.89;MQ0=5;MQRankSum=1.723;QD=8.40;ReadPosRankSum=2.509;VQSLOD=1.1558;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,6:5:8.64:50,9,0	./.	./.	./.	1/1:1,5:5:8.24:37,8,0	1/1:2,8:9:16.86:84,17,0	1/1:1,14:9:17.09:93,17,0	0/1:1,2:3:11.27:22,0,11	1/1:0,2:2:5.88:36,6,0	0/1:2,4:6:10.50:17,0,11	1/1:0,4:4:2.74:12,3,0	1/1:1,8:6:11.65:74,12,0	1/1:0,4:3:5.49:24,5,0	1/1:0,6:5:14.24:77,14,0	1/1:0,5:5:10.98:49,11,0	1/1:0,10:10:22.71:121,23,0	1/1:1,13:14:25.74:143,26,0	1/1:2,7:8:21.65:107,22,0	0/1:1,5:5:8.25:36,0,8	1/1:0,7:6:8.67:52,9,0	1/1:2,5:6:13.95:69,14,0	1/1:1,4:5:14.41:81,14,0	1/1:2,2:2:2.74:12,3,0	1/1:0,6:6:16.94:88,17,0	1/1:0,3:2:2.74:12,3,0	1/1:0,11:10:24.65:134,25,0	1/1:0,15:14:25.96:148,26,0	1/1:0,3:3:5.54:25,6,0
chr10	77508241	.	ATTCTTTTTT	A	959.27	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.758;DP=516;FS=3.127;HRun=0;HaplotypeScore=128.7590;InbreedingCoeff=0.9578;MQ=56.02;MQ0=19;MQRankSum=1.226;QD=18.10;ReadPosRankSum=3.432;VQSLOD=2.4901;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:53.46:0,53,1084	0/0:8,0:8:21.07:0,21,673	0/0:37,0:17:28.62:0,29,294	0/0:23,0:14:28.03:0,28,285	1/1:2,15:18:12.53:270,13,0	0/0:20,0:20:57.06:0,57,1680	0/0:13,0:11:23.87:0,24,350	0/0:37,0:34:77.50:0,78,1586	0/0:7,0:6:8.97:0,9,152	0/0:25,0:25:62.89:0,63,1378	0/0:18,0:18:20.79:0,21,323	0/0:13,0:15:32.96:0,33,893	0/0:9,0:8:18.03:0,18,460	0/0:15,0:15:39.08:0,39,1069	1/1:18,2:20:48.61:584,49,0	0/0:11,0:10:27.02:0,27,623	0/0:26,0:25:53.57:0,54,1391	0/0:16,0:14:36.34:0,36,899	0/0:24,0:17:44.80:0,45,809	0/0:21,0:19:24:0,24,576	0/0:8,0:8:17.93:0,18,376	0/0:10,0:10:26.66:0,27,504	0/0:12,0:12:36.06:0,36,765	0/0:18,0:18:36.76:0,37,771	1/1:12,0:14:29.53:245,30,0	0/0:20,0:20:56.14:0,56,1337	0/0:22,0:20:63.10:0,63,1726	0/0:25,0:24:58.61:0,59,1191
chr10	77508261	.	T	TG	985.22	PASS	AB=0.974;AC=13;AF=0.232;AN=56;BaseQRankSum=1.368;DP=579;FS=77.072;HRun=0;HaplotypeScore=72.7195;InbreedingCoeff=-0.3230;MQ=48.01;MQ0=39;MQRankSum=-1.050;QD=3.69;ReadPosRankSum=3.913;VQSLOD=0.2866;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:74.50:0,74,556	0/1:10,0:10:56.04:56,0,61	0/0:35,0:4:7.26:0,7,33	0/0:24,0:6:10.15:0,10,67	0/0:23,0:23:26.28:0,26,165	0/1:22,0:22:99:100,0,179	0/0:7,9:11:8.89:0,9,59	0/0:25,0:21:7.38:0,7,264	0/0:11,0:10:23.90:0,24,192	0/1:30,0:30:99:148,0,199	0/1:23,0:23:46.09:79,0,46	0/0:16,0:16:39.30:0,39,314	0/0:16,0:15:29.67:0,30,231	0/1:20,0:20:55.27:55,0,130	0/0:20,0:20:25.93:0,26,249	0/1:9,0:8:50.26:50,0,56	0/1:27,0:25:99:136,0,105	0/1:14,0:12:44.79:45,0,87	0/1:23,0:16:92.39:92,0,123	0/1:22,0:22:46.65:47,0,82	0/1:8,0:7:38.97:49,0,39	0/0:11,0:11:25.71:0,26,195	0/0:17,0:16:44.26:0,44,344	0/0:23,0:23:41.93:0,42,357	0/0:15,0:15:16.53:0,17,205	0/1:17,18:35:99:195,0,227	0/1:24,0:22:84.25:84,0,216	0/0:18,5:22:8.42:0,8,184
chr10	77509839	.	CATCAGAGAT	C	5949.40	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.681;DP=570;FS=7.093;HRun=0;HaplotypeScore=155.1730;InbreedingCoeff=0.9938;MQ=79.89;MQ0=0;MQRankSum=-12.558;QD=68.38;ReadPosRankSum=1.206;VQSLOD=4.4191;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,4914	0/0:10,0:10:30.10:0,30,1488	0/0:11,0:11:26.52:0,27,1275	0/0:24,0:23:49.97:0,50,2307	0/0:23,0:23:69.22:0,69,3222	0/0:30,0:30:87.28:0,87,4174	0/0:11,0:11:33.11:0,33,1637	0/0:26,0:26:78.25:0,78,3479	1/1:1,20:20:54.18:1608,54,0	0/0:27,0:27:81.28:0,81,3940	0/0:18,0:18:54.19:0,54,2679	1/1:0,15:15:39.13:1136,39,0	1/1:0,9:9:21.07:624,21,0	0/0:16,0:16:45.13:0,45,1960	0/0:19,0:19:51.18:0,51,2531	0/0:23,0:23:60.19:0,60,2780	0/0:27,0:26:81.26:0,81,3893	0/0:22,0:21:60.18:0,60,2694	0/0:38,0:38:99:0,114,4957	0/0:26,0:26:78.27:0,78,3682	0/0:15,0:15:45.15:0,45,2233	1/1:0,15:15:30.10:886,30,0	1/1:1,14:15:39.13:1127,39,0	1/1:0,12:12:18.06:568,18,0	0/0:22,0:22:66.23:0,66,3275	0/0:25,0:25:75.24:0,75,3478	0/0:28,0:28:78.24:0,78,3602	0/0:5,0:5:15.05:0,15,744
chr10	77510553	.	T	TC	484.29	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.752;DP=584;FS=1.931;HRun=1;HaplotypeScore=80.8992;InbreedingCoeff=0.9895;MQ=83.23;MQ0=1;MQRankSum=-9.945;QD=7.69;ReadPosRankSum=-3.374;VQSLOD=-0.4278;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,1724	0/0:9,0:9:27.09:0,27,376	0/0:19,0:17:21.44:0,21,493	0/0:19,0:19:51.06:0,51,625	1/1:7,19:26:27.52:258,28,0	0/0:12,0:12:36.11:0,36,487	0/0:21,0:21:63.21:0,63,881	0/0:29,0:29:81.25:0,81,1090	0/0:25,0:25:75.19:0,75,979	0/0:32,0:32:96.17:0,96,1274	0/0:24,0:24:69.19:0,69,912	0/0:14,0:14:42.14:0,42,587	0/0:11,0:11:33.11:0,33,461	0/0:14,0:14:42.14:0,42,585	1/1:6,12:18:28.30:190,28,0	0/0:13,0:13:39.13:0,39,545	0/0:26,0:26:78.23:0,78,1052	0/0:16,0:16:48.16:0,48,671	0/0:19,0:19:57.11:0,57,724	0/0:26,0:26:75.22:0,75,1014	0/0:22,0:22:63.15:0,63,808	0/0:25,0:25:75.22:0,75,1013	0/0:24,0:24:72.22:0,72,988	0/0:16,0:16:48.15:0,48,655	1/1:7,11:19:15.48:176,15,0	0/0:22,0:22:66.22:0,66,922	0/0:35,0:35:99:0,105,1461	0/0:6,0:6:18.06:0,18,252
chr10	77510555	.	G	GCATGAA	3400.20	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.208;DP=595;FS=0.000;HRun=0;HaplotypeScore=133.8027;InbreedingCoeff=0.9964;MQ=83.11;MQ0=1;MQRankSum=-11.461;QD=45.95;ReadPosRankSum=-4.634;VQSLOD=2.6082;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,3190	0/0:11,0:11:30.09:0,30,682	0/0:20,0:18:40.27:0,40,936	0/0:19,0:19:51.17:0,51,1140	1/1:16,18:35:42.80:1087,43,0	0/0:11,0:11:33.11:0,33,811	0/0:22,0:22:63.22:0,63,1553	0/0:29,0:29:82.15:0,82,1955	0/0:23,0:23:69.22:0,69,1704	0/0:32,0:32:90.31:0,90,2211	0/0:23,0:23:69.22:0,69,1646	0/0:14,0:14:42.14:0,42,1067	0/0:12,0:12:36.11:0,36,870	0/0:15,0:15:45.14:0,45,1067	1/1:7,11:19:27.09:1224,27,0	0/0:14,0:14:39.13:0,39,999	0/0:25,0:25:75.24:0,75,1832	0/0:17,0:17:48.16:0,48,1231	0/0:17,0:17:51.15:0,51,1225	0/0:26,0:26:78.27:0,78,1941	0/0:19,0:19:51.17:0,51,1232	0/0:24,0:24:69.24:0,69,1715	0/0:25,0:25:72.24:0,72,1728	0/0:17,0:17:48.15:0,48,1144	1/1:8,11:20:49.10:1088,49,0	0/0:22,0:22:66.23:0,66,1692	0/0:35,0:35:99:0,105,2622	0/0:6,0:6:18.06:0,18,461
chr10	77510556	.	G	GCATGAAG	4801.96	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.528;DP=595;FS=3.082;HRun=0;HaplotypeScore=141.1193;InbreedingCoeff=0.9964;MQ=83.15;MQ0=1;MQRankSum=-10.453;QD=61.56;ReadPosRankSum=-6.643;VQSLOD=3.5130;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,3147	0/0:11,0:11:27.08:0,27,648	0/0:18,0:18:37.16:0,37,841	0/0:19,0:19:45.13:0,45,919	1/1:32,1:37:77.69:1621,78,0	0/0:11,0:11:30.10:0,30,751	0/0:22,0:22:60.16:0,60,1400	0/0:28,0:28:76.50:0,77,1904	0/0:23,0:23:69.22:0,69,1698	0/0:31,0:31:84.28:0,84,2089	0/0:23,0:23:63.21:0,63,1531	0/0:14,0:14:42.13:0,42,1004	0/0:12,0:12:36.11:0,36,854	0/0:15,0:15:42.13:0,42,1010	1/1:19,0:19:54.10:1701,54,0	0/0:15,0:15:39.13:0,39,985	0/0:25,0:25:69.24:0,69,1750	0/0:17,0:17:48.16:0,48,1247	0/0:16,0:16:48.15:0,48,1112	0/0:26,0:26:78.26:0,78,1921	0/0:18,0:18:45.15:0,45,1012	0/0:23,0:23:66.20:0,66,1610	0/0:26,0:26:63.22:0,63,1581	0/0:16,0:16:42.14:0,42,1061	1/1:22,0:21:60.01:1480,60,0	0/0:22,0:22:66.23:0,66,1714	0/0:35,0:35:99:0,99,2567	0/0:6,0:6:18.06:0,18,468
chr10	77510653	.	AAC	A	1562.86	PASS	AB=0.976;AC=23;AF=0.411;AN=56;BaseQRankSum=2.006;DP=515;FS=31.479;HRun=0;HaplotypeScore=99.8275;InbreedingCoeff=0.2546;MQ=70.96;MQ0=1;MQRankSum=-1.142;QD=5.32;ReadPosRankSum=6.121;VQSLOD=0.4745;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:37.33:0,37,484	0/1:8,0:8:8.51:26,0,9	0/0:16,0:14:19.77:0,20,268	0/0:13,0:12:20.18:0,20,295	0/0:36,0:36:44.57:0,45,235	0/1:16,0:16:39.54:47,0,40	0/1:17,1:18:5.28:141,0,5	0/1:23,0:23:31.99:32,0,260	0/0:14,0:14:16.18:0,16,123	0/1:22,2:24:36.04:137,0,36	1/1:22,2:24:19.16:234,19,0	0/0:17,0:17:43.83:0,44,362	0/0:9,0:9:20.55:0,21,137	1/1:9,1:10:5.32:105,5,0	0/0:18,0:18:13.06:0,13,167	0/1:22,0:22:51.12:94,0,51	1/1:18,1:19:0.03:147,0,0	1/1:25,1:26:33.94:233,34,0	0/1:14,0:14:46.06:46,0,51	0/1:26,0:25:99:99,0,119	1/1:4,0:4:9.41:32,9,0	0/0:17,0:17:19.97:0,20,195	0/0:20,0:20:42.48:0,42,311	0/0:11,0:11:23.37:0,23,142	0/0:27,0:26:32.28:0,32,235	1/1:26,2:28:2.13:172,2,0	0/1:19,2:21:50.15:110,0,50	1/1:11,0:10:18.72:92,19,0
chr10	77510656	.	ACC	A	7613.06	PASS	AB=0.617;AC=40;AF=0.714;AN=56;BaseQRankSum=-6.676;DP=503;FS=1.643;HRun=11;HaplotypeScore=79.6087;InbreedingCoeff=0.7902;MQ=72.08;MQ0=1;MQRankSum=-1.460;QD=19.18;ReadPosRankSum=3.998;VQSLOD=4.1881;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:25.60:0,26,338	1/1:0,6:6:18.05:192,18,0	0/0:16,0:14:23.84:0,24,267	0/0:12,1:12:24.08:0,24,311	1/1:2,0:36:87.29:378,87,0	1/1:4,12:16:33.07:351,33,0	1/1:4,14:18:42.10:447,42,0	1/1:11,12:23:29.98:311,30,0	0/1:5,1:13:9.99:10,0,55	1/1:5,15:21:50.84:522,51,0	1/1:4,18:23:56.85:574,57,0	0/0:14,0:18:26.26:0,26,197	0/0:4,0:9:9.30:0,9,31	1/1:2,8:10:21.05:223,21,0	1/1:5,0:18:35.61:155,36,0	1/1:3,18:21:45.10:479,45,0	1/1:3,16:19:45.11:479,45,0	1/1:2,24:26:66.15:694,66,0	1/1:2,11:13:33.07:351,33,0	1/1:8,18:26:51.07:542,51,0	1/1:0,5:5:12.03:128,12,0	0/1:6,3:16:35.88:46,0,36	0/0:15,0:19:22.70:0,23,83	0/0:4,0:10:4.54:0,5,27	1/1:7,0:26:52.14:227,52,0	1/1:3,25:28:75.16:790,75,0	1/1:6,15:21:42.10:447,42,0	1/1:1,9:10:26.81:267,27,0
chr10	77511525	.	A	AAATGTGAGCTGCAGTAAATA	1500.44	PASS	AB=0.750;AC=32;AF=0.941;AN=34;BaseQRankSum=-2.858;DP=45;FS=9.688;HRun=0;HaplotypeScore=32.0011;InbreedingCoeff=-0.1994;MQ=141.33;MQ0=0;MQRankSum=-2.504;QD=38.47;ReadPosRankSum=-2.151;VQSLOD=-0.0894;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:2.97:20,3,0	./.	0/1:4,1:8:42.89:727,0,43	0/1:4,0:5:13.26:13,0,34	1/1:1,0:1:3:25,3,0	1/1:1,0:1:3.01:52,3,0	./.	1/1:3,0:3:6.01:80,6,0	./.	1/1:2,0:2:6.01:57,6,0	1/1:1,0:1:3:25,3,0	1/1:3,0:3:9.03:120,9,0	1/1:1,0:1:3:25,3,0	./.	./.	1/1:1,0:1:3.01:40,3,0	./.	./.	1/1:1,0:1:3.01:72,3,0	1/1:4,0:4:9.03:177,9,0	1/1:2,0:2:5.97:46,6,0	1/1:2,0:2:3.01:42,3,0	./.	./.	./.	1/1:1,0:1:3.01:51,3,0	1/1:1,0:1:2.97:20,3,0	./.
chr10	77512711	.	AC	A	2540.47	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.739;DP=737;FS=0.000;HRun=1;HaplotypeScore=80.2744;InbreedingCoeff=0.9971;MQ=93.47;MQ0=0;MQRankSum=-1.495;QD=34.33;ReadPosRankSum=2.333;VQSLOD=3.6687;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,1565	0/0:15,0:15:45.15:0,45,716	0/0:37,0:38:99:0,108,1633	0/0:33,0:33:94.87:0,95,1458	1/1:0,21:21:48.16:670,48,0	0/0:21,0:21:60.20:0,60,957	0/0:23,0:23:69.24:0,69,1097	0/0:27,0:27:81.21:0,81,1203	0/0:31,0:31:93.32:0,93,1485	0/0:42,0:42:99:0,123,1933	0/0:18,0:18:51.17:0,51,810	0/0:25,0:25:72.25:0,72,1146	0/0:20,0:20:57.19:0,57,910	0/0:19,0:19:54.18:0,54,862	1/1:0,34:34:87.29:1217,87,0	0/0:19,0:19:57.19:0,57,910	0/0:41,0:41:99:0,123,1964	0/0:28,0:28:81.23:0,81,1259	0/0:23,0:23:69.22:0,69,1077	0/0:36,0:36:99:0,105,1639	0/0:37,0:37:99:0,108,1713	0/0:21,0:21:54.18:0,54,859	0/0:25,0:25:75.26:0,75,1183	0/0:22,0:22:63.21:0,63,1006	1/1:0,19:19:57.19:796,57,0	0/0:21,0:21:63.21:0,63,1005	0/0:34,0:34:93.26:0,93,1426	0/0:7,0:7:18.06:0,18,287
chr10	77512892	.	T	TACTC	34389.30	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-9.863;DP=582;FS=12.169;HRun=0;HaplotypeScore=74.1397;InbreedingCoeff=0.9958;MQ=80.41;MQ0=0;MQRankSum=-8.060;QD=66.78;ReadPosRankSum=5.171;VQSLOD=6.7125;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:63.19:0,63,1132	1/1:0,16:17:48.16:1293,48,0	0/0:16,0:16:21.46:0,21,655	0/0:26,0:26:63.15:0,63,1116	1/1:6,31:38:90.31:2377,90,0	1/1:0,18:18:48.16:1293,48,0	1/1:0,18:18:54.19:1455,54,0	1/1:7,22:30:87.26:2138,87,0	1/1:3,17:22:45.15:1188,45,0	1/1:2,28:29:81.26:2125,81,0	1/1:0,10:11:27.09:729,27,0	1/1:1,17:18:48.16:1294,48,0	1/1:0,15:15:39.13:1050,39,0	1/1:2,13:16:36.12:970,36,0	1/1:0,24:24:66.23:1779,66,0	1/1:3,8:12:24.08:628,24,0	1/1:3,19:22:51.18:1366,51,0	1/1:0,8:9:24.08:648,24,0	1/1:5,20:26:69.24:1749,69,0	1/1:3,18:21:48.16:1293,48,0	1/1:4,17:23:51.18:1376,51,0	1/1:0,10:12:30.10:809,30,0	1/1:1,10:10:24.08:648,24,0	1/1:0,13:13:33.58:891,34,0	1/1:2,23:25:66.23:1762,66,0	1/1:1,26:26:75.24:1923,75,0	1/1:3,24:28:63.22:1688,63,0	1/1:3,23:27:72.25:1920,72,0
chr10	77513064	.	AC	A	438.34	PASS	AB=0.824;AC=3;AF=0.054;AN=56;BaseQRankSum=1.072;DP=368;FS=7.568;HRun=2;HaplotypeScore=137.2993;InbreedingCoeff=-0.0671;MQ=70.24;MQ0=3;MQRankSum=-2.528;QD=7.07;ReadPosRankSum=-2.682;VQSLOD=-0.3680;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.29:0,90,1323	0/0:5,0:5:14.94:0,15,161	0/0:6,0:6:12.04:0,12,172	0/0:15,0:16:27.02:0,27,445	0/1:13,0:13:0.68:1,0,290	0/0:15,0:14:35.47:0,35,332	0/1:17,5:22:99:100,0,335	0/1:13,14:27:99:427,0,476	0/0:10,0:10:23.62:0,24,231	0/0:16,0:16:44.88:0,45,569	0/0:8,0:8:5.89:0,6,38	0/0:12,0:12:35.50:0,35,334	0/0:7,0:7:5.91:0,6,60	0/0:13,0:13:35.33:0,35,303	0/0:18,0:18:38.24:0,38,338	0/0:10,1:10:23.43:0,23,164	0/0:12,0:12:17.67:0,18,152	0/0:11,1:11:23.86:0,24,281	0/0:9,0:9:26.77:0,27,312	0/0:13,0:13:20.36:0,20,149	0/0:12,1:12:20.85:0,21,241	0/0:7,0:7:11.82:0,12,107	0/0:18,0:18:7.82:0,8,197	0/0:11,0:11:8.90:0,9,102	0/0:11,0:11:29.24:0,29,214	0/0:15,0:15:35.80:0,36,439	0/0:14,0:13:32.28:0,32,269	0/0:4,0:4:8.92:0,9,105
chr10	77513065	.	C	CCACCATTTGTCAGAAACA	54117.89	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-2.058;DP=507;FS=4.724;HRun=0;HaplotypeScore=170.4236;InbreedingCoeff=0.9408;MQ=64.32;MQ0=3;MQRankSum=-10.198;QD=118.94;ReadPosRankSum=0.464;VQSLOD=4.6373;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.27:0,84,4036	1/1:6,1:8:18.06:1130,18,0	0/0:6,0:6:12.04:0,12,443	0/0:16,0:16:32.85:0,33,1094	1/1:5,8:15:36.08:1795,36,0	1/1:9,6:22:33.11:2096,33,0	1/1:23,0:23:54.16:3078,54,0	1/1:27,0:27:78.25:4284,78,0	1/1:5,4:16:21.07:1432,21,0	1/1:14,2:22:57.20:3121,57,0	1/1:6,1:13:18.06:768,18,0	1/1:6,6:21:27.09:2192,27,0	1/1:4,1:10:12.04:929,12,0	1/1:6,7:15:30.10:2337,30,0	1/1:9,8:22:45.15:3384,45,0	1/1:4,6:15:27.09:2017,27,0	1/1:8,3:16:21.07:1596,21,0	1/1:8,2:16:24.08:1749,24,0	1/1:7,3:24:72.20:3779,72,0	1/1:10,3:18:36.12:2338,36,0	1/1:10,4:26:27.09:1387,27,0	1/1:5,2:9:15.05:935,15,0	1/1:9,7:24:48.16:3079,48,0	1/1:8,2:16:21.07:1201,21,0	1/1:3,8:23:30.10:2541,30,0	1/1:9,3:24:65.51:3552,66,0	1/1:7,6:17:33.11:2642,33,0	1/1:2,1:8:9.03:757,9,0
chr10	77513234	.	C	CT	1605.68	PASS	AB=0.962;AC=7;AF=0.125;AN=56;BaseQRankSum=5.562;DP=524;FS=2.480;HRun=8;HaplotypeScore=71.4995;InbreedingCoeff=0.8365;MQ=60.87;MQ0=0;MQRankSum=-4.384;QD=18.25;ReadPosRankSum=-1.121;VQSLOD=3.4082;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.03:0,66,603	0/0:12,0:12:30.01:0,30,274	0/0:24,0:13:16.67:0,17,163	0/1:23,0:13:4.77:5,0,136	1/1:5,22:27:68.95:757,69,0	0/0:13,0:13:36.02:0,36,329	0/0:17,0:17:41.96:0,42,364	0/0:23,0:23:66.03:0,66,601	0/0:11,0:11:30.02:0,30,274	0/0:28,0:28:69.02:0,69,629	0/0:16,0:16:42.02:0,42,384	0/0:15,0:15:30.01:0,30,274	0/0:4,0:4:6:0,6,55	0/0:7,0:7:18:0,18,164	1/1:3,12:15:42.09:468,42,0	0/0:9,0:9:21.01:0,21,192	0/0:27,0:27:57.43:0,57,545	0/0:14,0:14:32.98:0,33,296	0/0:24,0:23:44.34:0,44,380	0/0:23,0:23:54.01:0,54,490	0/0:16,0:16:42.01:0,42,383	0/0:22,0:22:60.02:0,60,549	0/0:16,0:16:42.02:0,42,384	0/0:32,0:32:77.62:0,78,713	1/1:10,11:21:48.06:521,48,0	0/0:18,0:18:41.51:0,42,366	0/0:24,0:24:44.65:0,45,403	0/0:17,0:17:26.99:0,27,244
chr10	77513847	.	ACGTGTGTG	A	3042.44	PASS	AB=0.996;AC=22;AF=0.393;AN=56;BaseQRankSum=13.455;DP=542;FS=19.986;HRun=0;HaplotypeScore=166.8771;InbreedingCoeff=-0.4974;MQ=59.81;MQ0=8;MQRankSum=-10.581;QD=7.66;ReadPosRankSum=4.679;VQSLOD=1.3890;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,108,3047	1/1:9,1:10:19.60:328,20,0	0/0:10,0:9:7.17:0,7,99	0/0:18,0:15:13.26:0,13,152	0/1:19,0:19:15.21:15,0,132	0/0:13,2:15:14.23:0,14,145	0/1:19,0:17:9.49:9,0,194	0/1:29,0:29:7.78:8,0,464	0/1:14,0:14:76.79:77,0,176	0/1:21,0:21:99:459,0,140	0/1:19,0:19:11.34:11,0,177	0/1:12,0:11:44.05:44,0,97	0/1:18,0:17:99:365,0,124	0/0:12,0:12:11.80:0,12,94	0/1:16,0:16:87.89:169,0,88	0/1:19,0:18:99:289,0,102	0/1:20,0:20:80.10:240,0,80	0/0:15,0:15:26.53:0,27,178	0/1:14,0:13:55.82:56,0,131	0/1:25,0:25:99:125,0,106	0/0:31,0:30:17.42:0,17,132	0/1:10,0:10:31.47:74,0,31	0/1:15,0:15:48.95:49,0,115	0/1:24,1:25:89.37:109,0,89	0/1:20,0:20:99:284,0,150	0/1:31,0:30:73.51:74,0,474	0/1:23,1:24:99:361,0,209	0/1:17,0:16:58.72:59,0,161
chr10	77515174	.	CAGAGTGTGGGGGGAGAGAGGTGCAGCCCCAGCTAT	C	845.26	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=3.369;DP=459;FS=19.244;HRun=0;HaplotypeScore=374.1028;InbreedingCoeff=0.8243;MQ=82.91;MQ0=0;MQRankSum=-3.263;QD=13.21;ReadPosRankSum=-1.175;VQSLOD=0.8967;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:63.22:0,63,4960	0/0:3,0:3:6.02:0,6,320	0/0:17,0:18:30.07:0,30,620	0/0:19,0:19:19.84:0,20,681	0/0:14,0:14:27.09:0,27,1765	0/0:14,0:14:24.08:0,24,1632	0/0:25,0:25:60.21:0,60,3791	0/0:17,0:17:30.10:0,30,1301	1/1:10,0:10:8.96:148,9,0	0/0:11,0:11:21.07:0,21,1418	0/0:6,0:6:6.49:0,6,273	1/1:13,0:13:18.06:542,18,0	1/1:4,0:4:6.02:125,6,0	0/0:21,0:21:42.14:0,42,3450	0/0:6,0:6:15.05:0,15,1644	0/0:12,0:12:21.07:0,21,1705	0/0:39,0:39:87.23:0,87,7311	0/0:27,0:27:60.16:0,60,5847	0/0:18,0:18:36.12:0,36,2329	0/0:9,0:9:23.75:0,24,1173	0/0:48,0:48:99:0,105,6572	1/1:3,9:12:0.47:1,0,0	1/1:7,0:7:3.01:57,3,0	1/1:18,0:18:11.90:124,12,0	0/0:24,0:24:54.19:0,54,5111	0/0:16,0:16:30.10:0,30,1705	0/0:6,0:6:18.06:0,18,1316	0/0:8,0:8:18.06:0,18,1369
chr10	77515186	.	GGA	G	202.73	PASS	AB=0.842;AC=6;AF=0.107;AN=56;BaseQRankSum=5.858;DP=443;FS=5.507;HRun=0;HaplotypeScore=65.3012;InbreedingCoeff=-0.0071;MQ=81.33;MQ0=0;MQRankSum=-4.881;QD=3.17;ReadPosRankSum=-2.428;VQSLOD=0.7663;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:78.24:0,78,1306	0/0:3,0:3:9.03:0,9,154	0/0:17,0:18:41.30:0,41,685	0/0:20,0:20:54.12:0,54,802	0/0:13,0:13:36.11:0,36,557	0/0:15,0:15:36.11:0,36,595	0/0:23,0:23:69.22:0,69,1175	0/0:16,0:16:42.11:0,42,654	0/1:6,2:8:42.65:43,0,161	0/0:11,0:11:30.10:0,30,499	0/0:4,0:4:5.95:0,6,104	0/1:8,6:14:99:149,0,211	0/1:4,1:5:48.57:49,0,84	0/0:23,0:23:56.85:0,57,913	0/0:9,0:9:26.87:0,27,390	0/1:9,0:9:2.60:3,0,342	0/0:35,0:35:99:0,102,1750	0/0:27,0:27:72.23:0,72,1215	0/0:19,0:19:51.17:0,51,852	0/0:8,0:8:21.07:0,21,365	0/0:51,0:51:99:0,135,2265	0/1:10,0:10:0:0,0,0	0/0:3,0:3:3.01:0,3,51	0/1:11,7:18:69.35:69,0,290	0/0:22,0:22:63.20:0,63,1039	0/0:11,0:11:33.11:0,33,575	0/0:6,0:6:18.06:0,18,314	0/0:11,0:11:30.07:0,30,461
chr10	77515515	.	C	CTCCA	22830.12	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-9.321;DP=654;FS=6.888;HRun=0;HaplotypeScore=97.8289;InbreedingCoeff=0.9630;MQ=61.64;MQ0=2;MQRankSum=-2.892;QD=41.21;ReadPosRankSum=4.799;VQSLOD=5.0549;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:53.11:0,53,839	1/1:5,7:12:12.04:298,12,0	0/0:41,0:34:35.88:0,36,687	0/0:31,0:25:37.09:0,37,621	1/1:5,20:28:48.10:1115,48,0	1/1:6,17:23:36.12:896,36,0	1/1:10,13:25:39.09:913,39,0	1/1:11,20:32:69.21:1407,69,0	1/1:4,24:28:60.21:1493,60,0	1/1:8,13:21:36.10:746,36,0	1/1:3,16:19:27.09:672,27,0	1/1:4,13:17:27.09:636,27,0	1/1:11,15:26:39.13:944,39,0	1/1:1,11:12:24.08:562,24,0	1/1:9,16:24:39.13:896,39,0	1/1:8,21:29:63.22:1514,63,0	1/1:4,16:21:36.12:895,36,0	1/1:7,16:23:39.13:953,39,0	1/1:6,11:19:45.15:978,45,0	1/1:5,15:20:33.11:745,33,0	1/1:5,15:21:36.12:896,36,0	1/1:4,14:19:21.03:522,21,0	1/1:7,11:20:17.90:448,18,0	1/1:3,22:25:45.15:1120,45,0	1/1:6,16:22:39.13:971,39,0	1/1:7,19:27:66.22:1500,66,0	1/1:4,26:33:60.04:1486,60,0	1/1:2,4:6:9.03:224,9,0
chr10	77515531	.	A	ATCCC	13710.55	PASS	AB=0.991;AC=28;AF=0.500;AN=56;BaseQRankSum=10.816;DP=630;FS=12.069;HRun=0;HaplotypeScore=125.0398;InbreedingCoeff=-0.5783;MQ=71.55;MQ0=2;MQRankSum=0.431;QD=26.07;ReadPosRankSum=14.434;VQSLOD=1.3184;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:68.29:0,68,1237	0/1:8,1:9:9.95:213,0,10	0/0:38,0:33:98.90:0,99,1376	0/0:35,0:30:77.23:0,77,1186	0/1:28,0:28:34.82:710,0,35	0/1:21,0:21:72.82:561,0,73	0/1:22,0:22:67.25:480,0,67	0/1:28,0:28:99:720,0,126	0/1:29,0:29:45.72:956,0,46	0/1:20,0:20:99:394,0,136	0/1:16,0:16:8.87:422,0,9	0/1:16,0:16:56.87:382,0,57	1/1:19,0:20:10.15:605,10,0	0/1:16,0:16:74.84:336,0,75	0/1:21,0:21:45.82:504,0,46	0/1:29,0:29:99:881,0,104	0/1:22,1:23:78.76:570,0,79	0/1:23,0:23:71.78:578,0,72	0/1:20,0:20:44.23:495,0,44	0/1:17,0:17:19.86:465,0,20	0/1:28,0:28:99:535,0,187	1/1:16,0:16:21.03:359,21,0	1/1:16,0:16:2.74:288,3,0	0/1:23,0:23:41.80:724,0,42	0/1:20,0:20:18.82:604,0,19	0/1:24,1:25:12.24:842,0,12	0/1:34,1:34:78.82:946,0,79	0/1:5,0:5:11.93:142,0,12
chr10	77516379	.	C	CTT	3750.26	PASS	AB=0.668;AC=31;AF=0.554;AN=56;BaseQRankSum=8.896;DP=660;FS=0.806;HRun=12;HaplotypeScore=97.2184;InbreedingCoeff=0.4034;MQ=62.74;MQ0=1;MQRankSum=2.334;QD=7.44;ReadPosRankSum=-1.339;VQSLOD=0.9333;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:38:80.69:0,81,729	0/1:8,0:15:6.82:51,0,7	0/0:9,0:8:11.99:0,12,111	0/1:7,0:6:0:0,0,0	1/1:10,25:36:68.89:807,69,0	0/1:11,0:31:50.26:68,0,50	0/1:4,0:20:14.34:83,0,14	0/1:22,0:30:64.68:81,0,65	0/0:19,0:19:41.88:0,42,387	1/1:7,1:31:51.90:234,52,0	0/1:10,3:30:7.59:202,0,8	0/0:16,0:19:26.72:0,27,234	0/0:15,0:15:36.01:0,36,333	1/1:9,1:26:32.96:154,33,0	1/1:8,21:31:38.51:464,39,0	1/1:7,0:26:11.13:96,11,0	1/1:5,0:25:47.41:164,47,0	1/1:7,0:28:19.93:130,20,0	0/1:6,0:14:24.56:56,0,25	1/1:8,1:23:35.54:179,36,0	0/1:9,1:19:29.04:76,0,29	0/0:19,0:19:38.68:0,39,360	0/0:21,0:21:47.78:0,48,444	0/0:16,0:16:32.96:0,33,305	1/1:13,17:34:54.47:596,54,0	1/1:5,0:23:36.75:162,37,0	0/1:5,0:21:9.07:56,0,9	1/1:7,0:22:5.22:93,5,0
chr10	77517089	.	C	CGGCCTTAT	9390.24	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-2.776;DP=546;FS=3.304;HRun=0;HaplotypeScore=143.4990;InbreedingCoeff=0.9804;MQ=86.21;MQ0=1;MQRankSum=-12.343;QD=89.43;ReadPosRankSum=-1.109;VQSLOD=5.2740;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:75.24:0,75,1950	0/0:7,0:7:9.03:0,9,244	0/0:24,0:23:49.72:0,50,1165	0/0:23,0:19:36.39:0,36,960	0/0:14,0:14:36.12:0,36,975	0/0:11,0:11:33.11:0,33,863	0/0:21,0:21:51.18:0,51,1383	0/0:35,0:35:90.30:0,90,2385	1/1:11,12:23:60.21:2362,60,0	0/0:19,0:19:51.18:0,51,1376	0/0:16,0:16:35.78:0,36,976	1/1:5,13:18:48.16:1995,48,0	1/1:6,16:22:57.19:2294,57,0	0/0:17,0:17:39.13:0,39,1044	0/0:32,0:32:93.32:0,93,2517	0/0:18,0:18:51.16:0,51,1296	0/0:23,0:23:60.16:0,60,1561	0/0:19,0:19:39.06:0,39,851	0/0:30,0:30:69.22:0,69,1675	0/0:16,0:16:39.13:0,39,1057	0/0:17,0:17:39.13:0,39,1057	1/1:8,7:15:39.13:1250,39,0	1/1:5,4:11:27.09:937,27,0	1/1:7,9:16:19:551,19,0	0/0:15,0:15:39.13:0,39,1019	0/0:22,0:22:57.19:0,57,1430	0/0:21,0:20:48.16:0,48,1271	0/0:5,0:5:12.04:0,12,325
chr10	77517118	.	C	CTT	3167.99	PASS	AB=0.837;AC=43;AF=0.768;AN=56;BaseQRankSum=-2.180;DP=537;FS=2.024;HRun=15;HaplotypeScore=136.9922;InbreedingCoeff=0.1385;MQ=66.81;MQ0=4;MQRankSum=-1.528;QD=6.63;ReadPosRankSum=-4.136;VQSLOD=-0.1200;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:37:41.89:0,42,410	1/1:3,1:9:13.08:79,13,0	0/0:22,0:13:11.67:0,12,86	0/1:16,0:10:17.23:17,0,31	0/1:9,0:9:0.80:3,0,1	1/1:4,4:8:12.04:150,12,0	1/1:9,6:17:4.92:120,5,0	1/1:22,5:30:10.11:271,10,0	0/1:15,0:18:9.21:34,0,9	1/1:11,7:21:3.23:211,3,0	1/1:9,3:13:13.85:141,14,0	0/1:10,0:16:2.96:64,0,3	1/1:15,0:20:11.47:52,11,0	1/1:11,11:24:20.32:195,20,0	0/1:25,0:25:19.56:20,0,43	1/1:9,8:17:17.85:197,18,0	1/1:26,4:30:16.59:385,17,0	0/1:10,10:21:6.90:133,0,7	1/1:17,7:27:3.01:238,3,0	1/1:13,6:23:4.94:177,5,0	0/1:6,8:19:2.75:166,0,3	1/1:10,0:10:2.37:9,2,0	1/1:12,0:23:18.59:90,19,0	0/1:6,1:10:21.48:45,0,21	0/1:10,0:10:1.76:2,0,13	1/1:15,7:24:18.63:184,19,0	1/1:10,11:22:4.20:269,4,0	1/1:4,1:11:11.94:69,12,0
chr10	77518180	.	CGTGTGT	C	4221.84	PASS	AB=0.826;AC=32;AF=0.667;AN=48;BaseQRankSum=5.540;DP=430;FS=2.214;HRun=0;HaplotypeScore=121.4652;InbreedingCoeff=0.7168;MQ=59.86;MQ0=7;MQRankSum=-7.903;QD=16.24;ReadPosRankSum=0.284;VQSLOD=3.9802;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:25:30.08:0,30,511	1/1:5,5:11:24.05:429,24,0	./.	./.	1/1:15,0:24:27.09:377,27,0	1/1:7,8:16:21.07:408,21,0	1/1:13,2:15:9.50:175,10,0	./.	0/0:10,0:12:14.15:0,14,424	1/1:18,7:28:21.94:396,22,0	1/1:10,10:21:15.94:307,16,0	0/0:15,0:16:20.71:0,21,547	0/0:8,0:10:18.06:0,18,487	1/1:6,2:9:9.03:170,9,0	1/1:4,0:9:15.05:209,15,0	1/1:10,6:17:21.07:408,21,0	0/1:16,2:19:3.77:249,0,4	0/1:7,0:9:35.86:36,0,55	./.	1/1:5,3:9:9.03:164,9,0	1/1:8,0:10:3:50,3,0	0/0:11,0:11:14.26:0,14,415	0/0:12,0:16:24.06:0,24,526	0/0:21,0:22:30.04:0,30,794	1/1:6,0:15:24.08:335,24,0	1/1:13,2:15:6.02:122,6,0	1/1:17,4:23:17.76:327,18,0	1/1:6,3:8:3.01:61,3,0
chr10	77519288	.	CG	C	2169.47	PASS	AB=0.789;AC=44;AF=0.880;AN=50;BaseQRankSum=-0.980;DP=348;FS=8.519;HRun=7;HaplotypeScore=41.3701;InbreedingCoeff=0.6391;MQ=37.91;MQ0=42;MQRankSum=-0.160;QD=7.72;ReadPosRankSum=0.379;VQSLOD=-0.1202;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:52.87:0,53,393	1/1:1,1:2:2.92:17,3,0	0/0:33,1:4:8.30:0,8,43	0/1:25,0:3:0:0,0,0	./.	1/1:14,0:13:17.73:116,18,0	1/1:12,1:12:17.62:131,18,0	1/1:16,1:14:23.42:169,23,0	1/1:10,0:10:12.91:64,13,0	1/1:13,1:13:24.65:175,25,0	1/1:11,0:10:19.58:125,20,0	1/1:11,0:11:11.53:45,12,0	1/1:5,0:5:3.80:17,4,0	1/1:7,1:8:17.67:117,18,0	./.	1/1:6,0:6:11.87:87,12,0	1/1:15,1:15:22.37:152,22,0	1/1:14,1:15:22.87:159,23,0	1/1:5,8:11:17.91:140,18,0	1/1:13,1:12:29.64:201,30,0	0/1:6,10:15:0:0,0,0	1/1:8,0:10:14.96:65,15,0	1/1:7,0:4:4.19:21,4,0	1/1:16,0:10:12.31:63,12,0	./.	1/1:18,1:16:31.60:216,32,0	1/1:9,1:9:19.11:157,19,0	1/1:4,1:3:5.99:52,6,0
chr10	77519294	.	GGA	G	1836.47	PASS	AB=0.953;AC=27;AF=0.540;AN=50;BaseQRankSum=-2.190;DP=412;FS=3.805;HRun=0;HaplotypeScore=57.0009;InbreedingCoeff=-0.2589;MQ=40.88;MQ0=43;MQRankSum=-1.488;QD=6.47;ReadPosRankSum=1.224;VQSLOD=2.5192;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:71.16:0,71,603	0/1:5,0:5:2.92:3,0,9	0/0:49,0:8:14.58:0,15,108	0/0:39,0:5:2.55:0,3,10	./.	0/1:9,3:13:14.33:129,0,14	0/1:13,0:12:29.50:46,0,30	0/1:21,1:18:43.40:149,0,43	0/1:12,0:12:27.45:27,0,55	0/1:13,0:12:8.87:132,0,9	1/1:14,0:14:3.86:112,4,0	0/1:10,0:9:17.18:17,0,29	0/1:7,0:6:3.90:4,0,31	1/1:13,1:15:26.55:177,27,0	./.	0/1:6,1:7:0.50:86,0,0	0/1:18,0:18:10.47:154,0,10	0/1:19,0:19:16.07:144,0,16	0/1:15,0:13:8.68:90,0,9	1/1:16,1:16:33.93:210,34,0	1/1:14,0:13:7.86:34,8,0	0/1:9,0:9:24.76:25,0,45	0/1:7,0:4:6.22:6,0,26	0/1:16,0:10:0.42:31,0,0	./.	1/1:16,1:16:22.81:238,23,0	0/1:9,1:11:16.45:137,0,16	0/1:5,1:4:26.53:35,0,27
chr10	77519347	.	T	TAAAA	13659.42	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-7.699;DP=457;FS=7.445;HRun=9;HaplotypeScore=93.0220;InbreedingCoeff=0.9452;MQ=53.12;MQ0=1;MQRankSum=-5.720;QD=41.77;ReadPosRankSum=-1.639;VQSLOD=3.3990;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:66.20:0,66,965	1/1:2,4:6:12.04:289,12,0	0/0:15,0:14:24:0,24,343	0/0:10,0:8:11.37:0,11,140	1/1:2,1:17:44.31:550,44,0	1/1:8,8:17:30.10:680,30,0	1/1:3,8:14:27.09:609,27,0	1/1:11,13:23:39.12:852,39,0	0/0:2,0:18:19.91:0,20,53	1/1:6,11:18:39.13:874,39,0	1/1:5,12:19:45.11:938,45,0	0/0:1,0:9:9.96:0,10,26	0/0:4,0:14:10.41:0,10,27	1/1:5,10:16:33.11:777,33,0	1/1:0,0:18:48.07:578,48,0	1/1:10,9:22:29.83:691,30,0	1/1:4,13:19:42.14:965,42,0	1/1:4,8:15:27.09:599,27,0	1/1:10,14:28:66.21:1434,66,0	1/1:2,7:11:27.09:601,27,0	1/1:2,2:6:12.04:254,12,0	0/0:1,0:15:20.45:0,20,86	0/0:4,0:14:14.48:0,14,74	0/0:1,0:5:4.98:0,5,13	1/1:3,0:17:39.12:489,39,0	1/1:9,11:21:42.14:922,42,0	1/1:12,7:22:33.11:711,33,0	1/1:6,9:16:36.12:848,36,0
chr10	77520209	.	C	CTTTTT	10295.47	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=1.187;DP=434;FS=31.574;HRun=12;HaplotypeScore=131.9783;InbreedingCoeff=0.0726;MQ=53.37;MQ0=3;MQRankSum=-5.889;QD=23.72;ReadPosRankSum=-4.487;VQSLOD=-0.2204;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:16.31:16,0,309	1/1:4,0:6:9.02:153,9,0	0/1:10,0:10:11.02:11,0,114	0/1:5,0:4:10.34:10,0,82	1/1:12,9:21:31.75:391,32,0	1/1:9,5:15:16.87:338,17,0	1/1:7,0:9:4.74:217,5,0	1/1:20,0:23:37.68:707,38,0	1/1:12,1:22:30.53:550,31,0	1/1:27,1:27:43.69:803,44,0	1/1:11,0:14:31.66:526,32,0	1/1:11,0:11:30.07:434,30,0	1/1:14,0:14:29.86:405,30,0	1/1:13,2:14:24.04:448,24,0	1/1:8,0:13:9.03:157,9,0	1/1:11,2:15:23.38:445,23,0	1/1:15,0:16:19.61:286,20,0	1/1:7,1:13:21.07:504,21,0	1/1:14,0:23:39.10:717,39,0	1/1:14,0:19:26.44:444,26,0	1/1:10,0:10:12.04:227,12,0	1/1:9,8:17:26.44:399,26,0	1/1:11,1:14:18.02:337,18,0	1/1:8,0:7:1.72:4,2,0	1/1:9,0:9:15.04:244,15,0	1/1:13,5:17:35.54:624,36,0	1/1:23,1:25:56.41:834,56,0	1/1:4,0:3:3.01:63,3,0
chr10	77520484	.	C	CTT	1208.62	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-2.357;DP=313;FS=3.656;HRun=9;HaplotypeScore=39.9615;InbreedingCoeff=0.6947;MQ=61.95;MQ0=0;MQRankSum=-0.976;QD=27.47;ReadPosRankSum=-1.060;VQSLOD=2.6897;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:36.07:0,36,383	0/0:7,0:7:14.99:0,15,147	0/1:6,0:6:26.27:26,0,108	0/0:4,0:4:6.01:0,6,64	1/1:4,13:18:39.13:590,39,0	0/0:22,0:22:60.11:0,60,631	0/0:9,0:9:27.07:0,27,287	0/0:20,0:20:42.08:0,42,447	0/0:4,0:4:6.01:0,6,64	0/0:21,0:21:57.13:0,57,599	0/0:11,0:11:24.05:0,24,253	0/0:11,0:11:24.05:0,24,255	0/0:3,0:3:9.02:0,9,96	0/0:6,0:6:12.01:0,12,128	1/1:0,7:7:18.06:277,18,0	0/0:6,0:6:9.01:0,9,96	0/0:22,0:22:59.87:0,60,619	0/0:11,0:12:11.16:0,11,297	0/0:15,0:15:27.06:0,27,287	0/0:17,0:17:36.08:0,36,383	0/0:4,0:4:12.03:0,12,128	0/0:5,0:5:15.04:0,15,160	0/0:12,0:11:21.04:0,21,223	0/0:2,0:2:6.02:0,6,64	1/1:2,11:13:30.10:461,30,0	0/0:11,0:11:30.07:0,30,319	0/0:16,0:16:33.07:0,33,351	0/0:13,0:13:39.10:0,39,415
chr10	77521386	.	CG	C	2542.09	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.190;DP=643;FS=2.912;HRun=1;HaplotypeScore=88.3669;InbreedingCoeff=0.9994;MQ=79.14;MQ0=0;MQRankSum=-2.548;QD=34.82;ReadPosRankSum=3.973;VQSLOD=3.8134;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1486	0/0:19,0:19:54.18:0,54,852	0/0:17,0:17:50.80:0,51,690	0/0:11,0:12:35.88:0,36,454	1/1:1,27:28:63.21:881,63,0	0/0:27,0:27:78.17:0,78,1098	0/0:24,0:24:72.23:0,72,1121	0/0:38,0:38:99:0,114,1752	0/0:16,0:16:45.14:0,45,691	0/0:23,0:23:60.14:0,60,798	0/0:25,0:25:65.93:0,66,808	0/0:27,0:27:81.26:0,81,1271	0/0:28,0:28:81.26:0,81,1253	0/0:20,0:20:60.19:0,60,935	1/1:0,27:27:78.26:1091,78,0	0/0:25,0:25:69.24:0,69,1102	0/0:21,0:21:60.13:0,60,905	0/0:10,0:10:30.08:0,30,454	0/0:10,0:10:27.09:0,27,427	0/0:26,0:26:71.98:0,72,916	0/0:27,0:27:78.17:0,78,1105	0/0:22,0:22:60.13:0,60,834	0/0:23,0:23:54.11:0,54,744	0/0:21,0:21:63.21:0,63,1006	1/1:0,18:18:51.17:713,51,0	0/0:17,0:17:51.13:0,51,710	0/0:33,0:33:96.32:0,96,1515	0/0:22,0:22:66.21:0,66,1030
chr10	77522118	.	CA	C	7335.13	PASS	AB=0.538;AC=49;AF=0.875;AN=56;BaseQRankSum=0.252;DP=550;FS=4.160;HRun=12;HaplotypeScore=67.3826;InbreedingCoeff=0.7352;MQ=67.29;MQ0=6;MQRankSum=1.118;QD=15.77;ReadPosRankSum=2.384;VQSLOD=6.1059;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:36:86.54:0,87,807	1/1:0,5:5:14.94:116,15,0	0/0:26,0:16:19.35:0,19,146	0/0:23,0:16:19.32:0,19,156	1/1:7,11:19:7.43:231,7,0	1/1:3,15:18:38.84:302,39,0	1/1:6,11:17:32.86:255,33,0	1/1:7,14:20:41.81:323,42,0	1/1:4,10:13:26.87:209,27,0	1/1:2,12:14:13.31:251,13,0	0/1:3,17:21:11.07:281,0,11	1/1:2,18:20:41.84:325,42,0	1/1:2,15:18:10.45:254,10,0	1/1:3,10:13:11.17:190,11,0	1/1:6,9:16:28.92:215,29,0	1/1:2,13:16:34.91:261,35,0	1/1:7,29:38:34.87:607,35,0	1/1:3,14:20:47.93:343,48,0	1/1:5,19:25:55.80:422,56,0	1/1:3,24:25:38.27:480,38,0	1/1:2,17:19:18.36:319,18,0	1/1:5,8:13:1.67:120,2,0	1/1:5,18:23:41.63:325,42,0	1/1:1,18:19:50.80:395,51,0	1/1:3,16:20:46.83:355,47,0	1/1:3,15:19:37.80:282,38,0	1/1:5,14:20:39.91:290,40,0	1/1:1,8:9:23.90:186,24,0
chr10	77524033	.	AGATC	A	2557.81	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=2.392;DP=495;FS=10.160;HRun=0;HaplotypeScore=151.7582;InbreedingCoeff=0.7047;MQ=59.85;MQ0=3;MQRankSum=1.740;QD=18.53;ReadPosRankSum=1.822;VQSLOD=2.8958;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:57.05:0,57,1262	0/0:11,0:11:17.96:0,18,163	0/0:10,0:6:1.82:0,2,12	0/0:6,0:3:3.01:0,3,32	1/1:24,0:24:49.58:361,50,0	0/0:21,0:21:38.81:0,39,511	0/0:8,0:8:9.01:0,9,98	0/0:29,0:27:74.55:0,75,639	0/1:15,0:15:99:145,0,99	0/0:30,0:30:87:0,87,1428	0/0:19,0:19:32.71:0,33,392	1/1:5,4:9:21.02:261,21,0	1/1:9,7:16:38.97:451,39,0	0/0:17,0:17:29.89:0,30,336	1/1:11,0:11:32.83:283,33,0	0/0:13,0:12:26.76:0,27,246	0/0:23,0:23:53.28:0,53,567	0/0:14,0:14:37.82:0,38,441	0/0:21,0:20:44.84:0,45,512	0/0:20,0:20:55.03:0,55,626	0/0:6,0:5:5.86:0,6,124	1/1:4,12:16:39.04:602,39,0	0/1:14,0:14:67.89:68,0,237	1/1:7,0:7:0.40:1,0,0	1/1:26,0:25:66.13:572,66,0	0/0:27,0:27:76.51:0,77,842	0/0:40,0:40:99:0,105,1586	0/0:19,0:19:50.66:0,51,414
chr10	77524034	.	GATCGATCT	G	2452.96	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=-1.721;DP=515;FS=7.253;HRun=0;HaplotypeScore=198.8557;InbreedingCoeff=0.3609;MQ=55.46;MQ0=3;MQRankSum=2.028;QD=18.87;ReadPosRankSum=-0.496;VQSLOD=2.1525;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:57.08:0,57,1895	0/0:13,0:13:17.98:0,18,188	0/0:8,0:4:2.84:0,3,14	0/0:5,0:2:3.01:0,3,32	1/1:15,9:24:54.03:665,54,0	0/0:22,0:22:39.53:0,40,917	0/0:9,0:9:9.02:0,9,123	0/0:30,0:28:83.66:0,84,866	0/1:15,0:15:55.99:56,0,261	0/0:40,0:40:99:0,117,2771	0/0:22,0:22:32.74:0,33,611	0/1:9,0:9:21.07:41,0,21	0/1:16,0:16:29.12:133,0,29	0/0:19,0:19:29.95:0,30,534	1/1:6,5:11:33.04:479,33,0	0/0:16,0:15:27.49:0,27,399	0/0:25,0:25:53.38:0,53,810	0/0:14,0:14:37.87:0,38,731	0/0:21,0:20:44.86:0,45,804	0/0:20,0:20:55.18:0,55,1121	0/0:6,0:5:5.86:0,6,228	0/1:15,0:15:52.59:53,0,101	0/1:14,0:14:19.90:20,0,589	./.	1/1:17,9:26:69.14:1169,69,0	0/0:27,0:27:76.59:0,77,1284	0/0:40,0:40:99:0,105,2698	0/0:19,0:19:50.86:0,51,576
chr10	77524078	.	A	ATCT	1378.56	PASS	AB=0.843;AC=13;AF=0.232;AN=56;BaseQRankSum=1.876;DP=552;FS=7.666;HRun=0;HaplotypeScore=223.0668;InbreedingCoeff=-0.3094;MQ=54.37;MQ0=8;MQRankSum=-0.947;QD=5.20;ReadPosRankSum=1.294;VQSLOD=1.7082;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:47.18:0,47,1077	0/0:9,0:9:8.84:0,9,82	0/0:35,0:25:69.01:0,69,1174	0/0:20,0:16:16.88:0,17,475	0/0:23,0:23:30.06:0,30,435	0/1:14,1:17:97.45:107,0,97	0/0:8,0:8:2.85:0,3,28	0/0:35,0:32:75.01:0,75,674	0/0:15,0:15:32.82:0,33,254	0/1:40,0:42:99:119,0,437	0/1:20,0:22:40.73:41,0,102	0/0:15,0:15:10.63:0,11,195	0/1:12,0:12:1.35:1,0,126	0/1:15,0:20:25.33:25,0,97	0/0:16,0:16:33.02:0,33,472	0/1:16,0:17:18.88:19,0,108	0/1:18,1:20:63.86:64,0,138	0/1:12,5:16:99:121,0,179	0/1:10,2:10:24.41:24,0,121	0/1:13,4:17:91.19:137,0,91	0/1:12,4:15:80.60:117,0,81	0/0:23,0:23:38.42:0,38,268	0/0:24,0:24:50.71:0,51,399	0/0:9,0:9:8.78:0,9,59	0/0:19,0:18:39.05:0,39,574	0/1:16,6:22:99:279,0,206	0/1:12,17:29:99:472,0,115	0/0:8,0:8:23.87:0,24,175
chr10	77524092	.	CACAT	C	10393.07	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.765;DP=533;FS=5.740;HRun=0;HaplotypeScore=190.6044;InbreedingCoeff=0.8060;MQ=56.24;MQ0=0;MQRankSum=-3.651;QD=23.41;ReadPosRankSum=5.070;VQSLOD=4.3102;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:57.20:0,57,1405	1/1:1,6:7:7.11:149,7,0	0/0:31,0:27:39.13:0,39,919	0/0:33,0:24:45.13:0,45,1021	1/1:7,16:23:26.85:458,27,0	1/1:8,10:18:17.94:285,18,0	1/1:3,8:11:2.85:51,3,0	1/1:14,23:31:60.07:843,60,0	1/1:1,13:14:21.07:356,21,0	1/1:12,23:35:63.31:1258,63,0	1/1:8,10:17:14.89:232,15,0	1/1:1,13:14:27.09:458,27,0	1/1:4,10:14:15.05:254,15,0	1/1:6,9:15:17.91:288,18,0	1/1:2,18:20:42.14:712,42,0	1/1:4,11:15:20.62:356,21,0	1/1:6,9:15:12.01:204,12,0	1/1:3,11:14:30.10:498,30,0	1/1:5,9:13:24.06:373,24,0	1/1:3,7:12:11.83:203,12,0	1/1:3,17:19:23.58:406,24,0	1/1:10,17:27:20.61:355,21,0	1/1:3,18:21:32.18:559,32,0	1/1:1,9:10:8.52:152,9,0	1/1:3,17:20:36.12:611,36,0	1/1:7,19:26:57.18:940,57,0	1/1:8,12:20:24.08:342,24,0	1/1:0,4:4:2.98:51,3,0
chr10	77526100	.	TA	T	5295.70	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=16.283;DP=711;FS=3.631;HRun=1;HaplotypeScore=84.5267;InbreedingCoeff=1.0000;MQ=84.80;MQ0=0;MQRankSum=-5.255;QD=36.78;ReadPosRankSum=2.503;VQSLOD=5.3988;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1636	0/0:15,0:15:45.15:0,45,719	0/0:19,0:19:57.13:0,57,789	0/0:26,0:26:67.34:0,67,967	0/0:28,0:28:84.29:0,84,1327	0/0:27,0:27:81.28:0,81,1294	0/0:19,0:19:57.19:0,57,910	0/0:37,0:37:99:0,108,1589	1/1:0,20:20:57.19:795,57,0	0/0:37,0:37:99:0,111,1728	0/0:22,0:22:63.19:0,63,960	1/1:0,25:25:66.22:919,66,0	1/1:0,18:18:45.15:628,45,0	0/0:31,0:31:93.30:0,93,1451	0/0:26,0:26:78.27:0,78,1246	0/0:28,0:28:84.26:0,84,1295	0/0:28,0:28:84.26:0,84,1283	0/0:27,0:27:74.90:0,75,1143	0/0:19,0:19:57.15:0,57,870	0/0:33,0:33:99:0,99,1488	0/0:22,0:22:66.19:0,66,1023	1/1:0,30:30:72.20:983,72,0	1/1:0,18:18:48.16:671,48,0	1/1:0,33:33:93.31:1300,93,0	0/0:24,0:24:72.23:0,72,1128	0/0:25,0:25:75.23:0,75,1133	0/0:21,0:21:60.20:0,60,955	0/0:17,0:16:51.17:0,51,815
chr10	77526374	.	G	GA	2260.67	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.708;DP=644;FS=5.313;HRun=6;HaplotypeScore=59.9595;InbreedingCoeff=0.9856;MQ=86.17;MQ0=0;MQRankSum=-0.952;QD=29.75;ReadPosRankSum=0.298;VQSLOD=4.3008;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:98.94:0,99,1169	0/0:9,0:9:27.06:0,27,275	0/0:31,0:31:71.33:0,71,694	0/0:17,0:17:35.26:0,35,342	1/1:1,22:23:60.18:743,60,0	0/0:21,0:21:63.14:0,63,643	0/0:10,0:10:30.07:0,30,306	0/0:34,0:34:78.15:0,78,785	0/0:28,0:28:75.10:0,75,745	0/0:22,0:22:57.11:0,57,577	0/0:7,0:7:18.04:0,18,184	0/0:24,0:24:66.14:0,66,673	0/0:20,0:20:57.13:0,57,581	0/0:20,0:20:54.11:0,54,544	1/1:3,37:40:96.31:1208,96,0	0/0:29,0:28:72.15:0,72,734	0/0:33,0:33:90.19:0,90,912	0/0:23,0:23:66.12:0,66,664	0/0:18,0:18:51.12:0,51,520	0/0:26,0:26:69.15:0,69,704	0/0:20,0:20:51.11:0,51,519	0/0:24,0:24:69.16:0,69,704	0/0:20,0:20:48.10:0,48,489	0/0:27,0:26:81.15:0,81,816	1/1:0,13:13:36.12:453,36,0	0/0:24,0:24:72.16:0,72,734	0/0:32,0:32:84.16:0,84,848	0/0:4,0:4:12.03:0,12,122
chr10	77527685	.	CAAG	C	12598.15	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=16.290;DP=617;FS=17.077;HRun=0;HaplotypeScore=90.5955;InbreedingCoeff=0.9970;MQ=76.66;MQ0=0;MQRankSum=-3.492;QD=38.64;ReadPosRankSum=1.047;VQSLOD=4.8778;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.26:0,75,1633	1/1:1,8:9:21.07:337,21,0	0/0:12,0:12:30.10:0,30,580	0/0:15,0:14:36.09:0,36,638	0/0:30,0:30:90.31:0,90,1922	1/1:3,23:26:54.08:855,54,0	1/1:2,14:16:33.11:529,33,0	1/1:5,29:34:87.27:1338,87,0	0/0:25,0:25:69.24:0,69,1501	1/1:5,38:44:99:1734,114,0	1/1:0,18:18:51.05:758,51,0	0/0:30,0:30:84.29:0,84,1814	0/0:32,0:32:84.26:0,84,1788	1/1:0,18:18:48.16:770,48,0	0/0:28,0:27:84.29:0,84,1851	1/1:1,15:16:45.15:711,45,0	1/1:2,14:16:30.10:481,30,0	1/1:2,15:18:45.15:723,45,0	1/1:0,22:22:66.21:1019,66,0	1/1:1,19:20:51.17:787,51,0	1/1:2,6:8:15.05:241,15,0	0/0:21,0:21:54.17:0,54,1122	0/0:38,0:38:99:0,105,2230	0/0:15,0:15:42.14:0,42,887	0/0:19,0:19:51.18:0,51,1125	1/1:3,23:26:69.18:1027,69,0	1/1:0,20:20:45.15:711,45,0	1/1:0,15:15:36.12:577,36,0
chr10	77530740	.	GC	G	6382.57	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=18.291;DP=639;FS=0.693;HRun=1;HaplotypeScore=108.7073;InbreedingCoeff=0.9994;MQ=62.56;MQ0=0;MQRankSum=-1.932;QD=36.68;ReadPosRankSum=4.989;VQSLOD=4.6636;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,2201	0/0:9,0:9:27.09:0,27,432	0/0:18,0:17:40.54:0,41,621	0/0:29,0:24:41.09:0,41,806	1/1:0,20:20:51.17:706,51,0	0/0:26,0:25:75.26:0,75,1198	0/0:28,0:28:84.26:0,84,1293	0/0:36,0:36:99:0,108,1664	1/1:0,20:20:54.18:750,54,0	0/0:23,0:23:66.21:0,66,1014	0/0:17,0:17:51.16:0,51,790	1/1:1,28:29:72.24:991,72,0	1/1:1,25:26:69.22:936,69,0	0/0:19,0:19:57.19:0,57,911	1/1:0,17:17:51.17:706,51,0	0/0:28,0:28:84.29:0,84,1343	0/0:36,0:36:99:0,108,1697	0/0:11,0:11:33.11:0,33,519	0/0:25,0:24:72.24:0,72,1126	0/0:23,0:23:69.22:0,69,1080	0/0:33,0:33:99:0,99,1559	1/1:0,17:17:45.15:624,45,0	1/1:0,15:15:39.13:542,39,0	1/1:0,17:17:48.16:668,48,0	1/1:0,13:13:33.11:459,33,0	0/0:23,0:23:69.22:0,69,1060	0/0:24,0:24:72.21:0,72,1103	0/0:8,0:8:24.08:0,24,384
chr10	77532164	.	T	TA	1369.49	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.110;DP=564;FS=5.703;HRun=10;HaplotypeScore=69.0269;InbreedingCoeff=0.9789;MQ=73.58;MQ0=0;MQRankSum=0.958;QD=19.02;ReadPosRankSum=1.542;VQSLOD=4.7131;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:50.91:0,51,416	0/0:4,0:4:11.99:0,12,99	0/0:11,0:11:17.92:0,18,142	0/0:12,0:12:19.33:0,19,187	1/1:12,27:39:54.02:776,54,0	0/0:17,0:18:34.96:0,35,273	0/0:15,0:16:31.97:0,32,249	0/0:24,0:24:44.88:0,45,365	0/0:14,0:14:29.95:0,30,246	0/0:31,0:31:80.89:0,81,665	0/0:24,1:26:35.96:0,36,488	0/0:12,0:12:20.97:0,21,173	0/0:13,0:13:32.93:0,33,268	0/0:19,0:19:47.88:0,48,385	1/1:1,16:17:33.08:352,33,0	0/0:13,0:14:38:0,38,301	0/0:33,0:33:80.86:0,81,662	0/0:40,0:40:99:0,102,830	0/0:27,0:28:61.93:0,62,498	0/0:26,0:27:70.93:0,71,572	0/0:15,0:16:34.98:0,35,276	0/0:21,0:21:47.94:0,48,394	0/0:18,0:18:41.94:0,42,345	0/0:9,0:9:17.96:0,18,148	1/1:0,16:16:36.09:384,36,0	0/0:24,0:24:53.91:0,54,441	0/0:27,0:28:73.93:0,74,597	0/0:15,0:15:41.95:0,42,345
chr10	77532606	.	CT	C	838.43	PASS	AB=0.719;AC=23;AF=0.411;AN=56;BaseQRankSum=-4.770;DP=422;FS=3.945;HRun=17;HaplotypeScore=80.2768;InbreedingCoeff=0.0827;MQ=63.08;MQ0=12;MQRankSum=4.045;QD=3.06;ReadPosRankSum=3.899;VQSLOD=-0.0961;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:26,4:32:30.46:30,0,181	0/1:2,2:4:15.11:23,0,15	0/0:19,0:13:7.58:0,8,48	0/0:18,0:12:2.96:0,3,19	0/0:25,0:22:18.31:0,18,78	0/1:4,6:10:7.17:56,0,7	0/1:8,8:17:5.52:54,0,6	0/1:16,6:26:12.03:77,0,12	0/0:9,0:8:0:0,0,0	0/1:13,1:16:6.29:49,0,6	1/1:4,0:3:2.77:16,3,0	0/0:8,0:6:0:0,0,0	0/0:7,0:7:0:0,0,0	1/1:10,3:15:20.31:98,20,0	0/0:22,0:19:35.32:0,35,178	0/1:3,3:7:5.31:55,0,5	0/1:13,17:32:8.64:113,0,9	0/1:11,7:17:31.23:39,0,31	0/1:11,1:14:4.95:15,0,5	0/1:10,4:14:42.92:43,0,46	1/1:4,4:14:23.87:101,24,0	0/0:4,0:4:0:0,0,0	0/0:7,0:7:0:0,0,0	0/0:13,0:12:0:0,0,0	0/0:16,0:16:23.91:0,24,125	1/1:8,2:13:9.31:44,9,0	1/1:9,10:19:13.19:71,13,0	1/1:3,7:11:19.55:106,20,0
chr10	77535191	.	TTATTTATAGGCGGGACCAGTTG	T	2159.99	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.358;DP=336;FS=18.146;HRun=0;HaplotypeScore=178.9619;InbreedingCoeff=0.7630;MQ=94.96;MQ0=0;MQRankSum=-4.715;QD=51.43;ReadPosRankSum=3.325;VQSLOD=2.0145;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.13:0,66,4301	0/0:1,0:1:3.01:0,3,275	0/0:20,0:19:41.02:0,41,2037	0/0:13,0:13:13.99:0,14,797	0/0:6,0:6:18.02:0,18,759	0/0:6,0:6:18.03:0,18,970	0/0:26,0:26:75.16:0,75,5015	0/0:10,0:10:30.07:0,30,1367	1/1:2,6:8:12.04:704,12,0	0/0:18,0:18:48.14:0,48,2968	0/0:2,0:2:6.02:0,6,362	1/1:1,4:5:6.02:359,6,0	1/1:2,8:10:3.01:180,3,0	0/0:13,0:13:27.01:0,27,1065	0/0:12,0:12:36.07:0,36,2250	0/0:3,0:3:9.02:0,9,525	0/0:31,0:31:81.14:0,81,5400	0/0:28,0:28:69.15:0,69,4892	0/0:17,0:17:39.13:0,39,3002	0/0:6,0:6:17.99:0,18,316	0/0:24,0:24:60.09:0,60,3075	1/1:0,3:3:3.01:176,3,0	1/1:1,3:4:3.01:176,3,0	1/1:0,12:12:12.04:718,12,0	0/0:12,0:12:33.06:0,33,1882	0/0:10,0:10:30.09:0,30,2185	0/0:9,0:9:24.03:0,24,1612	0/0:4,0:4:8.90:0,9,545
chr10	77535504	.	G	GA	4840.24	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-12.592;DP=618;FS=3.949;HRun=5;HaplotypeScore=58.2796;InbreedingCoeff=0.9958;MQ=78.48;MQ0=0;MQRankSum=-2.803;QD=36.12;ReadPosRankSum=1.158;VQSLOD=4.8659;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,126,1346	0/0:6,0:6:18.05:0,18,193	0/0:21,0:21:36.08:0,36,380	0/0:22,0:22:17.62:0,18,376	0/0:24,0:24:66.17:0,66,709	0/0:23,0:23:66.15:0,66,701	0/0:20,0:20:51.10:0,51,538	0/0:21,0:21:54.13:0,54,580	1/1:1,35:36:96.31:1263,96,0	0/0:20,0:20:54.14:0,54,580	0/0:9,0:9:24.06:0,24,258	1/1:0,23:23:63.20:829,63,0	1/1:0,26:26:75.24:987,75,0	0/0:13,0:13:30.05:0,30,314	0/0:27,0:27:72.18:0,72,774	0/0:20,0:20:60.13:0,60,636	0/0:26,0:26:75.14:0,75,785	0/0:30,0:30:84.21:0,84,903	0/0:23,0:23:60.14:0,60,637	0/0:18,0:18:54.14:0,54,580	0/0:32,0:32:90.20:0,90,958	1/1:3,13:16:42.13:544,42,0	1/1:1,11:13:36.12:467,36,0	1/1:1,19:20:57.19:750,57,0	0/0:20,0:20:57.13:0,57,605	0/0:22,0:22:66.16:0,66,703	0/0:30,0:30:84.19:0,84,894	0/0:9,0:9:27.07:0,27,290
chr10	77535627	.	A	AGG	30334.85	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-12.050;DP=762;FS=11.652;HRun=4;HaplotypeScore=74.8646;InbreedingCoeff=0.9787;MQ=75.69;MQ0=1;MQRankSum=-4.757;QD=45.01;ReadPosRankSum=3.205;VQSLOD=3.3616;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,150,1983	1/1:0,3:3:9.03:162,9,0	0/0:17,0:17:42.13:0,42,544	0/0:18,0:19:23.72:0,24,447	1/1:1,19:20:54.14:933,54,0	1/1:0,20:22:54.19:973,54,0	1/1:3,25:29:66.23:1188,66,0	1/1:4,30:34:90.31:1615,90,0	1/1:4,38:42:93.32:1675,93,0	1/1:2,31:33:96.33:1697,96,0	1/1:2,20:22:51.17:917,51,0	1/1:0,24:24:72.20:1263,72,0	1/1:0,28:28:75.26:1350,75,0	1/1:3,16:18:39.13:701,39,0	1/1:1,23:24:63.22:1130,63,0	1/1:1,16:17:36.12:649,36,0	1/1:2,28:30:72.25:1283,72,0	1/1:3,31:34:93.32:1675,93,0	1/1:5,20:26:63.22:1131,63,0	1/1:3,21:24:57.20:1026,57,0	1/1:5,61:67:99:2864,160,0	1/1:0,17:18:39.13:702,39,0	1/1:2,16:18:48.16:864,48,0	1/1:5,26:31:66.23:1189,66,0	1/1:2,25:26:69.24:1239,69,0	1/1:0,27:28:84.27:1472,84,0	1/1:2,36:38:99:1827,102,0	1/1:0,15:15:45.15:810,45,0
chr10	77536867	.	GA	G	3023.45	PASS	AB=0.964;AC=15;AF=0.268;AN=56;BaseQRankSum=-8.853;DP=621;FS=2.070;HRun=9;HaplotypeScore=95.0150;InbreedingCoeff=0.7165;MQ=76.62;MQ0=1;MQRankSum=1.263;QD=14.33;ReadPosRankSum=-0.510;VQSLOD=3.7149;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,2:30:26.11:0,26,756	0/0:5,0:5:12.31:0,12,60	0/0:26,0:20:50.11:0,50,501	0/1:26,1:24:20.62:21,0,248	0/0:30,0:30:84.25:0,84,967	0/0:25,0:25:32.77:0,33,278	0/0:15,0:15:17.42:0,17,177	0/1:29,0:29:5.64:6,0,205	1/1:2,17:19:54.02:492,54,0	0/0:16,0:16:19.83:0,20,175	0/0:22,0:22:57.70:0,58,313	1/1:1,22:23:54.02:494,54,0	1/1:4,24:28:46.43:557,46,0	0/1:12,1:13:1.87:2,0,87	0/0:23,1:24:32.70:0,33,611	0/0:24,0:24:18.51:0,19,282	0/0:19,0:19:50.22:0,50,278	0/0:14,0:14:34.87:0,35,208	0/0:22,0:22:7.27:0,7,204	0/0:30,1:31:84.41:0,84,489	0/0:21,0:21:29.62:0,30,238	1/1:2,21:23:59.90:536,60,0	1/1:1,24:26:65.07:582,65,0	1/1:1,22:23:57.03:521,57,0	0/0:24,0:24:69.20:0,69,788	0/0:16,0:16:0.23:0,0,148	0/0:27,0:26:56.08:0,56,411	0/0:18,0:18:30.77:0,31,259
chr10	77537281	.	ATG	A	6732.70	PASS	AB=0.837;AC=35;AF=0.625;AN=56;BaseQRankSum=0.192;DP=1197;FS=10.076;HRun=0;HaplotypeScore=205.4426;InbreedingCoeff=0.6093;MQ=46.16;MQ0=86;MQRankSum=1.732;QD=7.87;ReadPosRankSum=3.524;VQSLOD=3.1372;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:43:53.73:0,54,751	1/1:8,4:11:12.71:123,13,0	0/0:36,0:25:7.71:0,8,156	0/0:34,0:17:19.80:0,20,217	1/1:35,14:50:45.14:537,45,0	1/1:15,6:19:24.06:277,24,0	1/1:53,9:50:9.84:138,10,0	1/1:61,4:32:9.46:410,9,0	0/0:50,1:45:20.30:0,20,821	1/1:45,12:46:36.78:686,37,0	1/1:15,7:21:24.07:287,24,0	0/0:49,0:42:37.47:0,37,548	0/0:56,0:45:54.15:0,54,752	1/1:33,13:36:17.96:185,18,0	1/1:65,8:58:29.61:322,30,0	1/1:31,13:32:20.48:232,20,0	0/1:21,6:24:57.84:210,0,58	0/1:16,5:19:60.63:186,0,61	0/1:27,6:23:11.15:234,0,11	1/1:19,15:32:53.60:586,54,0	1/1:78,13:71:6.65:641,7,0	0/0:40,2:40:17.60:0,18,721	0/0:24,0:20:21.07:0,21,315	0/1:49,1:43:1.94:2,0,393	0/1:19,8:25:20.66:199,0,21	1/1:41,12:48:31.26:719,31,0	1/1:14,8:20:30.09:348,30,0	1/1:33,8:36:24.36:411,24,0
chr10	77537315	.	A	ATG	4620.74	PASS	AB=0.855;AC=26;AF=0.500;AN=52;BaseQRankSum=4.442;DP=1467;FS=2.563;HRun=0;HaplotypeScore=276.6269;InbreedingCoeff=-0.1562;MQ=32.30;MQ0=201;MQRankSum=-1.375;QD=4.46;ReadPosRankSum=-0.429;VQSLOD=3.8829;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:59,4:51:62.15:0,62,790	1/1:13,6:14:4.24:27,4,0	./.	./.	1/1:36,8:42:21.07:323,21,0	1/1:22,7:23:6.06:35,6,0	1/1:74,0:54:5.36:55,5,0	0/0:127,0:17:21.70:0,22,184	0/0:59,5:55:35.48:0,35,469	0/1:64,14:47:99:779,0,125	1/1:18,9:22:2.17:45,2,0	0/0:66,0:55:24.62:0,25,310	0/1:59,4:48:99:123,0,277	0/1:36,11:34:16.46:207,0,16	0/1:72,25:75:21.23:180,0,21	0/1:47,26:57:18.34:207,0,18	0/1:28,2:22:86.61:87,0,112	0/1:28,5:29:27.04:301,0,27	0/1:48,2:33:99:284,0,278	0/1:33,18:46:99:290,0,142	0/1:105,7:83:28.01:448,0,28	0/1:43,0:39:9.92:10,0,289	0/0:36,0:26:13.51:0,14,153	0/0:70,3:63:25.23:0,25,294	0/1:26,11:32:59.81:106,0,60	0/1:51,12:46:99:593,0,324	1/1:21,6:23:21.80:258,22,0	0/1:24,9:27:67.30:263,0,67
chr10	77537323	.	G	GTA	1996.49	PASS	AB=0.985;AC=19;AF=0.365;AN=52;BaseQRankSum=3.814;DP=1503;FS=11.753;HRun=0;HaplotypeScore=301.6525;InbreedingCoeff=-0.3774;MQ=30.83;MQ0=215;MQRankSum=-2.221;QD=1.97;ReadPosRankSum=3.290;VQSLOD=0.7500;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:49:61.41:0,61,819	0/0:19,0:15:5.79:0,6,42	./.	./.	1/1:40,1:41:21.75:162,22,0	0/0:27,0:20:5.69:0,6,37	0/1:80,0:57:3.09:17,0,3	0/0:131,0:15:8.11:0,8,144	0/0:67,0:57:39.47:0,39,360	0/1:83,0:48:99:313,0,287	0/1:24,0:19:16.97:17,0,18	0/0:69,0:59:28.12:0,28,291	0/1:59,4:50:99:221,0,170	0/1:51,2:39:19.22:157,0,19	0/1:104,2:83:99:113,0,177	0/1:79,0:62:36.97:98,0,37	0/1:29,0:22:25.82:26,0,194	0/1:27,2:26:91.87:186,0,92	0/1:50,1:31:99:126,0,297	0/1:49,0:45:78.08:78,0,245	0/1:108,3:82:99:234,0,113	0/1:43,1:40:18.67:19,0,227	0/0:39,0:28:13.45:0,13,101	0/0:73,2:65:25.10:0,25,242	0/1:36,0:30:11.39:11,0,91	0/1:66,1:46:99:193,0,468	0/1:30,0:24:6.47:84,0,6	0/1:30,0:22:96.10:96,0,138
chr10	77537327	.	GTGTGTGTGTA	G	2875.19	PASS	AB=0.979;AC=24;AF=0.462;AN=52;BaseQRankSum=-3.153;DP=1512;FS=0.476;HRun=0;HaplotypeScore=353.5874;InbreedingCoeff=-0.3639;MQ=30.13;MQ0=216;MQRankSum=-4.525;QD=2.54;ReadPosRankSum=-3.673;VQSLOD=1.0604;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:48:54.57:0,55,1795	1/1:21,0:16:2.11:36,2,0	./.	./.	0/0:30,13:41:8.99:0,9,107	0/1:27,1:20:15.45:66,0,15	0/0:55,27:58:0.46:0,0,1	1/1:125,0:15:14.84:223,15,0	0/1:71,0:60:40.12:40,0,317	0/1:82,1:46:99:479,0,525	1/1:24,1:20:0.50:1,1,0	0/0:70,0:60:21.48:0,21,288	0/1:66,0:51:46.77:47,0,355	0/1:47,2:34:94.62:164,0,95	0/1:103,3:83:99:243,0,170	0/1:79,4:63:59.64:140,0,60	0/1:27,1:21:85.97:86,0,211	0/1:29,0:26:88.04:88,0,321	0/1:49,2:29:99:229,0,320	0/1:49,1:45:69.95:70,0,306	0/1:116,0:84:99:103,0,382	0/0:47,0:41:32.89:0,33,333	1/1:40,0:29:1.16:3,1,0	0/0:74,0:65:17.46:0,17,395	0/1:33,1:28:40.94:41,0,124	0/1:63,2:44:99:518,0,767	0/1:32,1:27:14.77:303,0,15	0/1:29,0:21:99:143,0,203
chr10	77537337	.	A	ATG	3917.93	PASS	AB=0.897;AC=28;AF=0.560;AN=50;BaseQRankSum=-4.353;DP=1526;FS=0.000;HRun=0;HaplotypeScore=286.5309;InbreedingCoeff=-0.5321;MQ=28.31;MQ0=240;MQRankSum=-1.840;QD=2.74;ReadPosRankSum=-4.095;VQSLOD=1.4898;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:61,1:47:56.80:0,57,753	1/1:20,0:14:1.25:3,1,0	./.	./.	./.	1/1:30,0:20:3:25,3,0	0/1:80,0:55:5.60:6,0,31	1/1:118,0:21:25.75:305,26,0	0/1:63,17:63:54.12:445,0,54	0/1:83,1:45:99:460,0,399	0/1:28,0:17:0.11:0,0,0	0/1:33,39:64:16.12:144,0,16	0/1:54,14:53:47.09:462,0,47	0/1:53,0:35:58.35:73,0,58	0/1:99,4:80:29:123,0,29	0/1:80,1:61:45.59:123,0,46	0/1:26,0:21:79.38:79,0,115	0/1:28,0:26:58.62:59,0,194	0/1:44,1:22:99:246,0,107	0/1:47,2:42:99:118,0,106	0/1:112,0:81:62.66:63,0,208	0/1:23,22:38:47.75:190,0,48	0/1:22,20:28:0:0,0,0	0/1:46,31:65:87.67:88,0,102	0/1:30,4:28:2.54:3,0,62	0/1:68,0:44:99:531,0,314	1/1:30,1:24:2.23:288,2,0	0/1:28,0:20:86.12:86,0,127
chr10	77537415	.	ATG	A	338.04	PASS	AB=0.963;AC=11;AF=0.212;AN=52;BaseQRankSum=0.984;DP=1499;FS=18.710;HRun=0;HaplotypeScore=340.9761;InbreedingCoeff=0.1742;MQ=32.73;MQ0=232;MQRankSum=1.495;QD=0.81;ReadPosRankSum=4.629;VQSLOD=0.8759;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,1:41:49.67:0,50,623	0/1:19,0:15:34.50:35,0,78	./.	./.	0/0:47,0:41:39.08:0,39,398	0/0:35,0:24:8.85:0,9,99	0/0:62,0:38:15.04:0,15,177	0/0:133,1:32:25.10:0,25,247	1/1:67,4:54:3.11:137,3,0	0/0:92,1:59:66.41:0,66,1014	0/0:40,0:29:18.05:0,18,212	0/1:52,4:48:3.75:65,0,4	0/1:60,6:53:56.24:57,0,56	0/0:63,0:49:2.82:0,3,198	0/0:80,0:59:30.11:0,30,266	0/0:63,0:44:19.62:0,20,206	0/1:40,1:34:0.06:0,0,503	0/0:41,1:34:7.05:0,7,389	0/0:42,0:23:26.42:0,26,276	0/0:46,0:41:26.99:0,27,284	0/0:96,1:65:40.27:0,40,418	1/1:35,5:36:17.18:121,17,0	0/1:32,2:24:21.45:27,0,21	0/1:67,2:52:27.13:27,0,57	0/0:53,0:48:10.40:0,10,246	0/0:77,0:64:25.41:0,25,795	0/0:50,0:41:27.35:0,27,451	0/1:23,0:21:10.05:10,0,122
chr10	77537423	.	G	GTA	3529.31	PASS	AB=0.992;AC=29;AF=0.537;AN=54;BaseQRankSum=-2.969;DP=1481;FS=4.514;HRun=0;HaplotypeScore=322.1572;InbreedingCoeff=-0.1217;MQ=33.67;MQ0=221;MQRankSum=3.120;QD=2.85;ReadPosRankSum=0.225;VQSLOD=1.9175;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:42:56.11:0,56,745	0/1:17,0:13:0.45:64,0,0	0/0:6,0:2:5.96:0,6,44	./.	0/0:45,0:39:41.52:0,42,190	1/1:34,0:25:8.48:69,8,0	1/1:60,0:37:20.74:156,21,0	0/1:128,0:31:99:233,0,102	0/1:70,0:55:56.96:57,0,69	0/1:87,2:58:99:459,0,219	0/1:41,0:30:38.18:73,0,38	0/1:54,0:46:18.83:24,0,19	0/1:63,2:52:29.03:29,0,82	0/1:63,0:49:59.06:86,0,59	0/0:79,0:59:17.08:0,17,164	1/1:60,2:45:17.38:145,17,0	0/1:41,0:36:52.28:237,0,52	1/1:41,1:34:3.37:258,3,0	0/1:42,0:23:99:122,0,110	1/1:47,0:42:8.95:251,9,0	1/1:94,1:68:12.92:293,13,0	1/1:37,0:34:21.53:84,22,0	0/1:30,0:20:5.96:11,0,6	0/1:68,1:52:33.03:33,0,63	0/0:54,0:49:40.96:0,41,192	0/1:71,1:60:99:396,0,224	0/1:50,0:42:56.31:341,0,56	0/1:25,0:22:10.65:110,0,11
chr10	77537425	.	G	GTA	1442.57	PASS	AB=0.993;AC=15;AF=0.278;AN=54;BaseQRankSum=-1.036;DP=1469;FS=17.284;HRun=0;HaplotypeScore=329.9219;InbreedingCoeff=-0.0045;MQ=34.11;MQ0=213;MQRankSum=0.632;QD=1.79;ReadPosRankSum=-5.712;VQSLOD=-0.0254;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:42:59.48:0,59,770	0/0:17,0:13:13.28:0,13,66	0/0:7,0:3:8.96:0,9,68	./.	1/1:43,1:38:38.80:416,39,0	0/0:34,0:25:8.86:0,9,43	0/1:59,0:38:32.55:33,0,46	0/0:127,0:31:19.12:0,19,319	0/1:70,0:56:56.44:56,0,214	0/1:86,0:57:3.04:3,0,377	0/0:40,0:29:16.78:0,17,113	0/0:54,1:47:6.21:0,6,186	0/0:61,1:50:34.01:0,34,296	0/0:61,0:48:1.88:0,2,120	0/1:78,1:59:0.92:312,0,1	0/1:64,0:48:11.78:12,0,64	0/0:44,0:39:52.15:0,52,277	0/0:43,0:35:13.49:0,13,161	0/1:42,0:24:99:104,0,109	0/1:47,0:43:99:129,0,115	0/1:92,0:68:19.02:19,0,147	0/0:37,0:35:5.78:0,6,168	0/1:28,0:19:27.59:28,0,58	0/1:69,0:52:19.28:19,0,170	1/1:53,1:49:18.25:435,18,0	0/1:69,1:59:36.20:36,0,390	0/0:48,0:41:11.12:0,11,222	0/0:24,0:22:11.52:0,12,65
chr10	77537437	.	A	ATG	9933.96	PASS	AB=0.842;AC=39;AF=0.696;AN=56;BaseQRankSum=-3.863;DP=1414;FS=1.893;HRun=0;HaplotypeScore=295.5100;InbreedingCoeff=0.3273;MQ=38.95;MQ0=147;MQRankSum=0.997;QD=8.39;ReadPosRankSum=-0.002;VQSLOD=3.9960;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:49:64.38:0,64,683	0/1:15,4:16:20.18:159,0,20	0/1:20,0:11:1.94:2,0,141	0/1:15,0:8:2.65:3,0,78	0/0:43,0:37:43.84:0,44,292	0/1:15,15:28:23.29:130,0,23	1/1:47,6:36:10.32:385,10,0	1/1:87,0:20:33.98:455,34,0	1/1:57,0:51:36.77:462,37,0	0/1:68,15:61:26.60:965,0,27	0/1:14,16:28:53.21:172,0,53	1/1:54,0:48:12.05:419,12,0	1/1:55,0:45:37.70:281,38,0	1/1:48,11:49:18.73:285,19,0	0/0:71,0:59:24.02:0,24,170	1/1:51,13:51:22.17:332,22,0	1/1:19,29:44:23.31:587,23,0	1/1:21,27:42:8.29:488,8,0	0/1:29,11:22:39.73:241,0,40	1/1:38,9:44:54.15:766,54,0	0/1:70,20:70:0.50:872,0,1	1/1:37,0:36:19.99:420,20,0	1/1:27,0:23:7.79:225,8,0	0/1:69,0:58:6.17:489,0,6	0/0:54,0:50:45.45:0,45,258	1/1:43,25:61:28.20:945,28,0	1/1:32,13:41:16:669,16,0	1/1:15,15:28:11.96:181,12,0
chr10	77537445	.	G	GTA	3652.68	PASS	AB=0.992;AC=24;AF=0.429;AN=56;BaseQRankSum=1.123;DP=1357;FS=11.014;HRun=0;HaplotypeScore=292.8147;InbreedingCoeff=-0.4353;MQ=41.36;MQ0=105;MQRankSum=1.728;QD=3.39;ReadPosRankSum=7.529;VQSLOD=0.8158;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:61,1:52:89.51:0,90,1143	0/1:16,0:14:53.64:54,0,67	0/0:31,0:21:58.36:0,58,615	0/0:21,0:13:12.47:0,12,346	0/0:44,0:39:51.03:0,51,606	0/1:31,0:29:47.36:47,0,99	0/1:45,0:34:99:134,0,115	0/1:62,0:24:99:133,0,217	0/1:48,3:47:99:156,0,176	0/1:80,1:63:99:425,0,332	0/1:30,0:27:70.18:70,0,95	0/1:53,0:46:77.29:77,0,180	0/1:58,0:49:27.85:28,0,166	0/1:55,1:48:4.17:123,0,4	0/0:71,1:58:29.66:0,30,356	0/1:62,2:52:2.60:131,0,3	0/1:47,0:42:99:251,0,103	0/1:50,0:45:77.08:215,0,77	0/1:31,0:21:65.40:65,0,222	1/1:43,0:41:3.85:291,4,0	0/1:88,2:73:98.57:369,0,99	0/1:37,0:36:69.41:69,0,181	0/1:25,0:22:61.34:61,0,70	0/1:65,2:56:99:152,0,279	0/0:48,0:45:50.94:0,51,522	0/1:67,0:61:99:392,0,247	0/1:46,0:42:99:312,0,102	1/1:28,0:26:13.91:97,14,0
chr10	77537782	.	G	GAA	8799.60	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-4.097;DP=579;FS=0.763;HRun=10;HaplotypeScore=81.1982;InbreedingCoeff=0.9690;MQ=57.30;MQ0=16;MQRankSum=-1.042;QD=26.43;ReadPosRankSum=-2.452;VQSLOD=4.4212;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:74.74:0,75,777	1/1:0,11:10:26.84:402,27,0	0/0:13,0:8:17.19:0,17,142	0/0:9,0:7:2.12:0,2,112	0/0:23,0:23:38.60:0,39,447	1/1:3,16:22:44.62:596,45,0	1/1:2,12:15:35.61:502,36,0	1/1:13,18:28:59.16:788,59,0	0/0:26,0:28:68.84:0,69,676	1/1:7,24:33:71.62:897,72,0	1/1:6,16:22:35.99:446,36,0	0/0:20,0:21:50.51:0,51,480	0/0:25,0:26:68.85:0,69,683	1/1:4,14:19:30.08:398,30,0	0/0:20,0:20:54.07:0,54,540	1/1:1,16:18:41.63:590,42,0	1/1:4,11:14:24.08:358,24,0	1/1:5,16:22:45.04:638,45,0	1/1:6,18:24:57.11:758,57,0	1/1:2,16:19:39.02:485,39,0	1/1:2,11:15:26.58:367,27,0	0/0:16,0:16:23.45:0,23,223	0/0:15,0:17:20.68:0,21,266	0/0:15,0:15:36.07:0,36,365	0/0:23,0:24:42.69:0,43,410	1/1:2,15:19:47.08:561,47,0	1/1:6,10:17:39.49:529,39,0	1/1:2,22:24:33.11:486,33,0
chr10	77538116	.	CCTTTT	C	11809.55	PASS	AB=0.613;AC=35;AF=0.648;AN=54;BaseQRankSum=7.813;DP=481;FS=2.481;HRun=0;HaplotypeScore=105.9003;InbreedingCoeff=0.9036;MQ=50.52;MQ0=19;MQRankSum=-12.653;QD=42.48;ReadPosRankSum=0.488;VQSLOD=4.8933;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.23:0,66,2087	1/1:1,1:1:3.01:65,3,0	0/0:22,0:10:27.09:0,27,783	0/0:28,0:14:42.14:0,42,1266	./.	1/1:2,10:9:21.07:456,21,0	1/1:3,19:20:44.72:974,45,0	1/1:11,10:16:30.09:611,30,0	0/0:24,0:23:63.22:0,63,1907	1/1:0,16:16:45.15:976,45,0	1/1:1,4:4:6.49:131,6,0	0/0:28,0:28:75.22:0,75,2149	0/0:15,0:15:45.15:0,45,1424	1/1:4,18:20:54.18:1171,54,0	1/1:8,12:19:51.18:1096,51,0	1/1:3,18:21:48.16:1041,48,0	1/1:2,20:21:42.14:912,42,0	1/1:4,23:27:63.17:1311,63,0	1/1:5,8:12:27.07:543,27,0	1/1:0,7:7:9.03:195,9,0	0/1:7,12:17:0:0,0,0	0/0:9,0:7:12.04:0,12,380	0/0:11,0:10:27.09:0,27,748	0/0:34,0:34:87.26:0,87,2644	1/1:3,4:7:9.03:195,9,0	1/1:1,12:13:30.10:635,30,0	1/1:8,17:23:57.20:1236,57,0	1/1:2,2:4:12.04:260,12,0
chr10	77538117	.	CTTTT	C	5023.94	PASS	AB=0.881;AC=34;AF=0.607;AN=56;BaseQRankSum=15.201;DP=477;FS=0.858;HRun=4;HaplotypeScore=122.1486;InbreedingCoeff=0.7457;MQ=52.06;MQ0=18;MQRankSum=-12.348;QD=17.88;ReadPosRankSum=1.340;VQSLOD=1.0653;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.23:0,66,1910	1/1:1,1:1:3:28,3,0	0/0:23,0:11:30.10:0,30,805	0/0:28,0:14:42.14:0,42,1186	0/1:7,1:7:0:0,0,0	1/1:11,0:8:21.02:196,21,0	1/1:21,1:20:44.29:421,44,0	0/1:14,4:14:6.70:243,0,7	0/0:24,0:23:63.22:0,63,1749	1/1:16,0:15:45.05:419,45,0	1/1:5,0:4:6.01:56,6,0	0/0:28,0:28:75.23:0,75,1978	0/0:15,0:15:45.15:0,45,1299	1/1:19,3:20:54.07:508,54,0	1/1:13,6:19:51.04:494,51,0	1/1:18,2:21:48.06:453,48,0	1/1:22,0:21:42.05:392,42,0	1/1:24,3:27:48.21:535,48,0	0/1:11,2:12:24.67:211,0,25	1/1:7,0:7:9.01:84,9,0	0/1:18,1:17:0:0,0,0	0/0:8,0:6:12.04:0,12,347	0/0:12,0:11:27.09:0,27,690	0/0:34,0:34:87.19:0,87,2429	1/1:7,0:7:9.01:84,9,0	1/1:13,0:13:12.87:244,13,0	1/1:18,7:23:57.07:543,57,0	1/1:2,2:4:12.02:114,12,0
chr10	77538281	.	CG	C	13198.14	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=8.450;DP=562;FS=7.860;HRun=6;HaplotypeScore=100.6301;InbreedingCoeff=0.9927;MQ=61.56;MQ0=1;MQRankSum=-3.503;QD=27.10;ReadPosRankSum=2.047;VQSLOD=4.8214;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1458	1/1:0,6:6:18.05:193,18,0	0/0:19,0:17:33.57:0,34,408	0/0:18,0:17:42.54:0,43,502	1/1:3,15:18:33.03:339,33,0	1/1:1,21:22:63.16:676,63,0	1/1:5,21:26:50.99:528,51,0	1/1:4,16:19:45.07:469,45,0	1/1:5,22:27:66.09:702,66,0	1/1:1,19:20:57.08:596,57,0	1/1:3,13:16:45.11:481,45,0	1/1:0,23:23:63.16:676,63,0	1/1:0,18:18:51.13:544,51,0	1/1:2,19:21:44.94:464,45,0	1/1:1,16:17:39.06:405,39,0	1/1:0,20:20:56.98:592,57,0	1/1:3,39:42:99:1095,102,0	1/1:1,20:21:54.14:580,54,0	1/1:1,7:6:18.05:193,18,0	1/1:0,10:10:30.08:321,30,0	1/1:3,31:34:87.22:934,87,0	1/1:1,9:10:27.07:290,27,0	1/1:2,12:14:32.17:352,32,0	1/1:2,24:26:69.17:741,69,0	1/1:0,21:21:54.14:579,54,0	1/1:0,20:20:60.15:643,60,0	1/1:1,17:18:51.13:547,51,0	1/1:1,8:9:24.06:258,24,0
chr10	77538287	.	GT	G	3173.03	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=13.346;DP=565;FS=4.870;HRun=1;HaplotypeScore=130.1233;InbreedingCoeff=0.2738;MQ=61.77;MQ0=0;MQRankSum=-2.712;QD=6.49;ReadPosRankSum=8.194;VQSLOD=0.5476;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1722	1/1:6,0:6:16:69,16,0	0/0:17,0:16:41.62:0,42,578	0/0:20,0:18:47.13:0,47,589	1/1:16,0:15:10.09:91,10,0	1/1:22,1:23:53.38:232,53,0	0/1:24,0:24:23.37:121,0,23	0/1:22,0:21:28.34:28,0,130	1/1:24,1:25:16.67:181,17,0	0/1:23,0:23:26.21:111,0,26	1/1:14,2:16:17.75:181,18,0	1/1:25,0:25:3.67:121,4,0	1/1:18,0:18:40.59:162,41,0	0/1:23,0:23:63.61:97,0,64	1/1:16,0:16:31.13:131,31,0	0/1:23,0:23:24.11:145,0,24	1/1:41,0:41:39.02:244,39,0	1/1:21,0:21:24.50:142,25,0	0/1:10,0:9:18.95:19,0,57	1/1:10,0:10:26.55:115,27,0	1/1:32,0:32:45.38:212,45,0	1/1:9,0:9:21.19:79,21,0	0/1:15,0:15:15.16:92,0,15	1/1:25,0:25:32.78:162,33,0	1/1:21,0:21:44.69:185,45,0	1/1:20,0:20:41.54:147,42,0	1/1:17,0:17:43.48:191,43,0	1/1:8,0:8:20.49:90,20,0
chr10	77538531	.	G	GA	556.11	PASS	AB=0.979;AC=21;AF=0.375;AN=56;BaseQRankSum=0.805;DP=223;FS=7.132;HRun=7;HaplotypeScore=70.4192;InbreedingCoeff=0.0701;MQ=44.85;MQ0=0;MQRankSum=-0.075;QD=4.28;ReadPosRankSum=0.545;VQSLOD=-0.1970;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:16.07:0,16,166	1/1:4,0:4:10.44:41,10,0	0/0:2,0:4:9.43:0,9,50	0/0:5,0:3:5.21:0,5,21	0/0:6,0:5:11.49:0,11,63	0/1:6,0:6:8.33:29,0,8	1/1:8,2:10:8.53:89,9,0	0/1:10,0:9:3.71:4,0,31	0/0:8,0:8:8.49:0,8,65	0/1:10,0:10:13.16:61,0,13	0/1:5,2:7:3.39:66,0,3	0/0:11,0:11:21.68:0,22,107	0/0:10,0:9:14.66:0,15,75	0/1:5,0:5:2.67:48,0,3	0/0:6,0:6:8.86:0,9,57	0/1:5,0:5:11.41:11,0,13	0/1:11,0:9:10.49:59,0,10	0/1:8,0:8:8.35:20,0,8	0/1:17,1:18:24.16:91,0,24	1/1:4,0:4:5.80:40,6,0	0/1:6,0:5:2.65:50,0,3	0/1:2,0:2:10.83:14,0,11	0/0:12,0:11:16.49:0,16,83	0/0:12,0:12:22.25:0,22,120	0/0:4,0:4:10.92:0,11,64	0/1:13,0:13:10.24:73,0,10	0/1:10,0:10:10.27:10,0,51	1/1:1,0:1:2.88:15,3,0
chr10	77538534	.	ATG	A	351.86	PASS	AB=0.962;AC=20;AF=0.357;AN=56;BaseQRankSum=-3.322;DP=215;FS=0.915;HRun=0;HaplotypeScore=69.0598;InbreedingCoeff=0.0959;MQ=48.14;MQ0=0;MQRankSum=-1.865;QD=2.43;ReadPosRankSum=-4.858;VQSLOD=0.3200;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,1:15:0.27:0,0,219	0/0:4,0:4:9.10:0,9,32	0/1:7,0:6:33.33:33,0,67	0/0:5,0:3:4.47:0,4,52	0/0:6,0:5:14.91:0,15,112	0/0:6,0:6:5.93:0,6,33	0/0:10,0:10:3.69:0,4,49	0/1:9,1:9:19.72:59,0,20	1/1:6,1:7:8.77:48,9,0	0/1:10,1:11:37.93:44,0,38	0/1:6,0:6:8.55:34,0,9	1/1:11,0:11:2.27:25,2,0	1/1:8,1:8:10.70:75,11,0	0/0:5,0:5:3.80:0,4,14	0/0:5,0:5:5.86:0,6,52	1/1:4,0:4:0.83:3,1,0	0/1:11,0:9:0.46:0,0,59	0/0:7,0:7:4.33:0,4,14	0/1:18,0:18:27.62:46,0,28	0/0:4,0:4:2.54:0,3,10	0/0:5,0:4:3.96:0,4,17	0/1:1,0:1:0:0,0,0	0/1:10,1:11:9.70:49,0,10	1/1:10,0:10:14.05:47,14,0	0/0:4,0:4:10.52:0,11,79	0/1:13,0:13:36.18:36,0,47	0/0:8,0:8:10.11:0,10,50	0/0:1,0:1:2.50:0,2,9
chr10	77538536	.	G	GA	1451.24	PASS	AB=0.799;AC=30;AF=0.536;AN=56;BaseQRankSum=-3.924;DP=239;FS=0.000;HRun=13;HaplotypeScore=98.1320;InbreedingCoeff=0.5173;MQ=49.70;MQ0=0;MQRankSum=-1.062;QD=9.94;ReadPosRankSum=0.890;VQSLOD=3.0767;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:16.68:0,17,205	1/1:0,4:4:12.01:111,12,0	0/0:9,0:8:5.19:0,5,46	0/1:7,0:5:0.52:1,0,24	0/0:6,0:5:14.85:0,15,102	1/1:3,4:7:12.01:111,12,0	1/1:7,5:12:7.68:198,8,0	1/1:8,3:10:5.88:55,6,0	0/0:3,0:7:6.28:0,6,18	1/1:7,7:14:8.51:191,9,0	1/1:7,1:8:11.04:87,11,0	0/0:2,0:11:14.61:0,15,43	0/0:4,0:8:14.56:0,15,43	1/1:4,1:5:11.50:89,11,0	0/0:5,0:5:5.94:0,6,41	1/1:4,0:4:5.99:49,6,0	0/1:7,6:11:8.09:138,0,8	0/1:4,4:8:3.57:47,0,4	1/1:11,6:17:8.10:219,8,0	1/1:2,2:4:6.01:56,6,0	1/1:2,3:4:6.01:56,6,0	0/1:1,0:1:0:0,0,0	0/0:6,0:11:10.21:0,10,53	0/0:3,0:11:12.59:0,13,37	0/0:7,0:7:11.80:0,12,77	0/1:10,3:14:2.85:147,0,3	0/1:4,4:8:9.24:52,0,9	1/1:3,1:4:2.69:28,3,0
chr10	77539413	.	AAAGGCTACATCATGT	A	1241.47	PASS	AC=6;AF=0.120;AN=50;BaseQRankSum=5.282;DP=435;FS=38.118;HRun=0;HaplotypeScore=195.8782;InbreedingCoeff=0.8218;MQ=83.09;MQ0=0;MQRankSum=-4.570;QD=35.47;ReadPosRankSum=1.312;VQSLOD=1.4576;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,7843	0/0:6,0:6:18.06:0,18,1021	0/0:15,0:15:45.15:0,45,2961	0/0:22,0:22:53.37:0,53,3322	0/0:3,0:3:6.02:0,6,403	0/0:18,0:18:51.13:0,51,3181	0/0:22,0:22:60.21:0,60,3922	0/0:25,0:25:72.24:0,72,4589	1/1:3,9:12:18.06:807,18,0	0/0:20,0:20:60.21:0,60,4209	0/0:6,0:6:18.06:0,18,1149	1/1:3,7:10:12.04:539,12,0	./.	0/0:24,0:24:66.21:0,66,4280	0/0:21,0:21:63.13:0,63,3971	0/0:16,0:16:45.15:0,45,2654	0/0:26,0:26:72.23:0,72,4659	0/0:19,0:19:54.19:0,54,3527	0/0:24,0:24:72.24:0,72,4548	0/0:3,0:3:9.03:0,9,675	0/0:37,0:37:99:0,111,7608	./.	./.	1/1:4,9:13:2.94:18,3,0	0/0:2,0:2:6.02:0,6,275	0/0:19,0:19:57.20:0,57,3636	0/0:24,0:23:65.75:0,66,3609	0/0:7,0:7:21.07:0,21,1502
chr10	77539569	.	C	CT	480.43	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=0.929;DP=305;FS=3.936;HRun=4;HaplotypeScore=48.2289;InbreedingCoeff=0.6378;MQ=66.64;MQ0=1;MQRankSum=-1.124;QD=18.48;ReadPosRankSum=2.194;VQSLOD=2.8846;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:30.07:0,30,324	0/0:2,0:2:3.01:0,3,34	0/0:17,0:15:1.28:0,1,124	0/0:8,0:4:3.58:0,4,49	1/1:3,7:10:15.05:203,15,0	0/0:11,0:11:8.95:0,9,78	0/0:4,0:4:6.02:0,6,68	0/0:53,0:52:99:0,123,1297	0/0:11,0:11:23.98:0,24,226	0/0:7,0:7:18.04:0,18,196	0/0:9,0:9:17.99:0,18,177	0/0:9,0:9:23.99:0,24,237	0/0:3,0:3:5.98:0,6,55	0/0:11,0:11:24.06:0,24,265	1/1:0,4:4:9.03:123,9,0	0/0:5,0:5:15.04:0,15,163	0/0:16,0:16:32.95:0,33,331	0/0:19,0:18:42.09:0,42,456	0/0:22,0:22:48.08:0,48,502	0/0:9,0:9:24.04:0,24,259	0/0:6,0:6:2.99:0,3,24	0/0:1,0:1:3.01:0,3,34	0/0:6,0:6:15.01:0,15,156	./.	1/1:4,8:12:21.07:285,21,0	0/0:8,0:8:21.06:0,21,237	0/0:19,0:19:51.06:0,51,535	0/0:12,0:12:17.99:0,18,170
chr10	77539583	.	GATTTATTTATTTATTT	G	2370.11	PASS	AB=0.842;AC=24;AF=0.667;AN=36;BaseQRankSum=2.820;DP=214;FS=6.618;HRun=0;HaplotypeScore=88.3922;InbreedingCoeff=0.3026;MQ=54.15;MQ0=10;MQRankSum=-2.258;QD=17.05;ReadPosRankSum=0.094;VQSLOD=0.5596;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:21.07:0,21,1337	1/1:1,1:2:3.01:132,3,0	./.	./.	0/0:5,0:5:3.01:0,3,149	1/1:1,8:9:6.02:263,6,0	./.	0/1:48,0:40:28.65:249,0,29	./.	1/1:4,1:5:3.01:132,3,0	1/1:4,0:4:6:85,6,0	0/0:5,0:5:6.02:0,6,313	./.	1/1:5,4:9:3.01:132,3,0	0/0:4,0:4:6.02:0,6,455	1/1:3,1:4:3.01:132,3,0	0/1:7,6:13:99:126,0,140	1/1:12,2:13:6.02:263,6,0	./.	./.	1/1:1,1:1:3.01:132,3,0	./.	0/0:5,0:5:3.01:0,3,215	./.	./.	1/1:5,2:7:6.02:193,6,0	1/1:13,2:15:3.01:132,3,0	1/1:1,6:6:12.04:527,12,0
chr10	77539612	.	AT	A	179.92	PASS	AB=0.956;AC=16;AF=0.364;AN=44;BaseQRankSum=3.449;DP=137;FS=4.952;HRun=3;HaplotypeScore=34.1750;InbreedingCoeff=0.0254;MQ=36.72;MQ0=16;MQRankSum=-1.876;QD=2.07;ReadPosRankSum=2.508;VQSLOD=-0.7405;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:24.04:0,24,321	1/1:2,0:2:1.82:5,2,0	./.	0/0:1,0:1:3.01:0,3,41	0/0:2,0:2:5.98:0,6,62	0/1:10,0:10:0.27:0,0,66	./.	0/1:20,7:15:99:158,0,180	0/0:2,0:2:6.02:0,6,81	0/1:4,0:3:0.18:0,0,30	0/1:3,0:3:26.38:51,0,26	0/0:5,0:5:12.04:0,12,166	./.	1/1:5,0:5:1.82:5,2,0	0/0:3,0:3:9.03:0,9,127	0/1:5,0:3:0.11:0,0,36	0/0:11,0:10:8.89:0,9,160	0/1:5,1:4:11.31:20,0,11	0/0:5,0:3:6.02:0,6,81	./.	0/1:4,0:2:0.14:0,0,37	0/0:1,0:1:3.01:0,3,40	0/0:2,0:2:3.01:0,3,43	./.	./.	0/1:5,0:3:28.26:34,0,28	1/1:6,0:4:1.82:5,2,0	1/1:10,0:8:2.95:13,3,0
chr10	77539839	.	AG	A	4358.88	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-6.408;DP=589;FS=19.327;HRun=5;HaplotypeScore=113.5400;InbreedingCoeff=0.9410;MQ=79.76;MQ0=0;MQRankSum=3.847;QD=26.26;ReadPosRankSum=1.253;VQSLOD=3.2045;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.29:0,93,1236	0/0:7,0:7:20.12:0,20,114	0/0:34,0:28:51.56:0,52,824	0/0:28,0:23:57.86:0,58,656	0/0:14,0:14:38.86:0,39,513	0/0:20,0:20:31.37:0,31,298	0/0:21,0:21:54.55:0,55,313	0/0:28,0:28:16.28:0,16,286	1/1:0,30:30:78.22:885,78,0	0/0:24,0:24:33.49:0,33,256	0/0:13,0:13:12.43:0,12,132	1/1:1,32:33:71.80:803,72,0	1/1:0,23:23:51.15:578,51,0	1/1:0,18:18:48.10:530,48,0	0/0:18,0:18:39.13:0,39,528	0/0:22,0:22:43.76:0,44,277	0/0:24,0:24:18.93:0,19,276	0/0:19,0:19:53.78:0,54,278	0/1:11,0:11:0.34:0,0,88	0/0:20,0:20:49.64:0,50,238	0/0:27,0:27:18.68:0,19,284	1/1:0,16:16:42.12:475,42,0	1/1:0,13:13:36.10:408,36,0	1/1:0,22:22:60.17:681,60,0	0/0:9,0:9:27.09:0,27,369	0/0:21,0:21:45.23:0,45,259	0/0:30,0:29:78.39:0,78,484	0/0:10,0:10:28.60:0,29,157
chr10	77539990	.	TATCCTCCCCTC	T	20978.20	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=16.522;DP=569;FS=6.294;HRun=0;HaplotypeScore=191.3055;InbreedingCoeff=0.9544;MQ=67.75;MQ0=0;MQRankSum=-17.583;QD=75.73;ReadPosRankSum=1.580;VQSLOD=3.9948;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,5413	1/1:0,8:7:18.06:667,18,0	0/0:28,0:28:78.26:0,78,3468	0/0:35,0:32:66.39:0,66,3886	1/1:20,0:18:8.78:860,9,0	1/1:0,21:21:48.16:1766,48,0	1/1:0,15:15:36.12:1317,36,0	1/1:22,0:22:43.84:1415,44,0	0/0:35,0:35:99:0,105,5946	1/1:0,21:21:60.20:1912,60,0	1/1:0,13:13:33.08:1112,33,0	0/0:34,0:34:99:0,102,5837	0/0:21,0:21:63.22:0,63,3457	0/0:24,0:24:72.25:0,72,3939	1/1:18,0:18:39.13:1235,39,0	1/1:0,21:21:48.16:1787,48,0	1/1:0,20:20:33.07:1120,33,0	1/1:0,8:8:18.02:562,18,0	1/1:0,5:5:15.05:559,15,0	1/1:0,10:10:18.06:646,18,0	1/1:0,15:15:27.05:874,27,0	0/0:24,0:24:66.23:0,66,3679	0/0:28,0:28:84.29:0,84,4668	0/0:30,0:30:90.31:0,90,5087	1/1:13,0:13:6.10:818,6,0	1/1:0,26:26:66.23:2320,66,0	1/1:0,19:19:48.16:1786,48,0	1/1:0,2:2:6.02:224,6,0
chr10	77539991	.	ATCCTCCCCTCG	A	19065.29	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=17.773;DP=569;FS=6.933;HRun=0;HaplotypeScore=198.3903;InbreedingCoeff=0.9773;MQ=69.35;MQ0=0;MQRankSum=-17.097;QD=69.58;ReadPosRankSum=0.872;VQSLOD=3.8511;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,5305	1/1:8,0:7:18.06:558,18,0	0/0:28,0:28:76.78:0,77,3543	0/0:36,0:33:68.88:0,69,4084	1/1:0,18:16:30.10:1057,30,0	1/1:21,0:21:48.16:1479,48,0	1/1:15,0:15:36.12:1099,36,0	1/1:0,22:22:66.06:1882,66,0	0/0:35,0:35:99:0,105,5880	1/1:21,0:21:57.59:1482,58,0	1/1:13,0:13:31.35:933,31,0	0/0:35,0:35:99:0,105,5917	0/0:21,0:21:63.22:0,63,3470	0/0:24,0:24:72.25:0,72,3838	1/1:1,17:18:39.13:1447,39,0	1/1:21,0:21:48.16:1497,48,0	1/1:20,0:20:30.99:922,31,0	1/1:8,0:8:15.94:442,16,0	1/1:5,0:5:15.05:456,15,0	1/1:10,0:10:18.06:539,18,0	1/1:15,0:15:24.97:713,25,0	0/0:24,0:24:66.23:0,66,3660	0/0:29,0:29:87.30:0,87,4779	0/0:30,0:30:90.31:0,90,5017	1/1:0,12:12:27.09:1003,27,0	1/1:26,0:26:66.04:1881,66,0	1/1:19,0:19:48.16:1494,48,0	1/1:2,0:2:6.02:184,6,0
chr10	77540146	.	A	AG	3446.61	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-5.846;DP=687;FS=2.493;HRun=5;HaplotypeScore=68.4175;InbreedingCoeff=0.9990;MQ=89.06;MQ0=0;MQRankSum=-2.010;QD=34.12;ReadPosRankSum=-1.657;VQSLOD=3.5000;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.11:0,93,966	0/0:10,0:10:27.07:0,27,290	0/0:30,0:30:75.07:0,75,766	0/0:23,0:23:57.11:0,57,599	1/1:3,29:32:81.26:1055,81,0	0/0:22,0:22:60.14:0,60,636	0/0:17,0:17:45.10:0,45,476	1/1:2,22:24:66.20:853,66,0	0/0:26,0:26:66.16:0,66,709	0/0:26,0:26:60.15:0,60,645	0/0:20,0:20:51.11:0,51,540	0/0:32,0:32:87.16:0,87,906	0/0:26,0:26:72.18:0,72,774	0/0:25,0:25:72.18:0,72,774	1/1:2,30:32:87.28:1144,87,0	0/0:32,0:32:84.21:0,84,903	0/0:19,0:19:48.12:0,48,516	0/0:23,0:23:66.14:0,66,699	0/0:23,0:23:54.13:0,54,579	0/0:28,0:28:69.16:0,69,734	0/0:36,0:36:99:0,102,1071	0/0:32,0:32:84.21:0,84,903	0/0:27,0:27:69.15:0,69,734	0/0:15,0:15:36.09:0,36,387	1/1:0,13:13:30.10:395,30,0	0/0:25,0:25:72.14:0,72,756	0/0:28,0:28:81.20:0,81,870	0/0:8,0:8:24.06:0,24,258
chr10	77540255	.	G	GT	4811.74	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-14.175;DP=739;FS=0.000;HRun=1;HaplotypeScore=84.1626;InbreedingCoeff=0.9987;MQ=82.05;MQ0=0;MQRankSum=-0.819;QD=44.55;ReadPosRankSum=-0.236;VQSLOD=4.3255;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,150,2077	0/0:11,0:11:30.10:0,30,419	0/0:30,0:30:87.28:0,87,1167	0/0:32,0:32:87.86:0,88,1184	1/1:0,19:19:51.17:815,51,0	0/0:14,0:14:42.14:0,42,587	0/0:29,0:29:87.29:0,87,1217	1/1:1,34:35:99:1646,105,0	0/0:22,0:22:66.21:0,66,906	0/0:24,0:24:72.24:0,72,994	0/0:21,0:21:60.20:0,60,838	0/0:34,0:34:99:0,102,1391	0/0:22,0:22:63.21:0,63,879	0/0:16,0:16:48.16:0,48,671	1/1:0,35:35:93.32:1487,93,0	0/0:37,0:37:99:0,111,1551	0/0:26,0:26:75.23:0,75,1028	0/0:18,0:18:54.10:0,54,712	0/0:39,0:39:99:0,114,1533	0/0:27,0:27:78.23:0,78,1056	0/0:40,0:40:99:0,120,1678	0/0:26,0:26:78.25:0,78,1075	0/0:30,0:30:90.30:0,90,1258	0/0:21,0:21:60.16:0,60,817	1/1:0,19:19:54.18:863,54,0	0/0:28,0:28:81.27:0,81,1131	0/0:25,0:25:69.23:0,69,965	0/0:7,0:7:21.07:0,21,293
chr10	77540575	.	T	TA	7151.16	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=6.043;DP=463;FS=55.596;HRun=1;HaplotypeScore=67.8711;InbreedingCoeff=0.9936;MQ=69.64;MQ0=0;MQRankSum=-8.079;QD=41.34;ReadPosRankSum=2.063;VQSLOD=0.5610;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.25:0,78,1011	1/1:0,6:6:18.06:269,18,0	0/0:16,0:16:48.14:0,48,598	0/0:14,0:14:38.91:0,39,479	0/0:31,0:31:90.28:0,90,1153	1/1:1,6:7:15.05:224,15,0	1/1:0,9:9:27.09:399,27,0	0/0:30,0:30:84.26:0,84,1075	0/0:16,0:16:45.13:0,45,562	1/1:0,15:15:45.14:654,45,0	1/1:1,18:19:49.41:720,49,0	0/0:14,0:14:42.09:0,42,501	0/0:19,0:19:57.19:0,57,739	0/0:11,0:11:33.11:0,33,428	0/0:28,0:28:81.26:0,81,1051	1/1:1,11:12:33.07:469,33,0	1/1:1,16:17:42.14:629,42,0	1/1:2,13:15:42.06:590,42,0	1/1:0,16:16:48.15:687,48,0	1/1:0,20:20:60.20:898,60,0	1/1:0,6:6:15.05:225,15,0	0/0:25,0:25:75.24:0,75,973	0/0:16,0:16:48.16:0,48,622	0/0:22,0:22:66.19:0,66,839	0/0:22,0:22:66.21:0,66,845	1/1:1,14:14:45.15:668,45,0	1/1:0,9:9:27.09:404,27,0	1/1:0,7:7:21.07:314,21,0
chr10	77541660	.	T	TCA	631.78	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.582;DP=330;FS=0.000;HRun=0;HaplotypeScore=70.2836;InbreedingCoeff=0.8508;MQ=85.58;MQ0=0;MQRankSum=-5.964;QD=25.27;ReadPosRankSum=-1.291;VQSLOD=3.5828;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:38.18:0,38,546	0/0:3,0:3:9.03:0,9,146	0/0:15,0:14:41.92:0,42,557	0/0:13,0:13:39:0,39,549	0/0:12,0:12:36.12:0,36,587	0/0:20,0:20:48.14:0,48,734	0/0:9,0:9:27.09:0,27,437	1/1:8,17:25:71.73:727,72,0	0/0:9,0:9:27.08:0,27,416	0/0:8,0:8:21.04:0,21,315	0/0:14,0:14:35.95:0,36,549	0/0:5,0:5:15.05:0,15,244	0/0:6,0:6:18.06:0,18,292	0/0:5,0:5:15.05:0,15,245	0/0:10,0:10:27.09:0,27,421	0/0:13,0:13:33.11:0,33,537	0/0:10,0:10:24.02:0,24,390	0/0:19,0:19:56.96:0,57,865	0/0:23,0:23:69.22:0,69,1094	0/0:10,0:10:25.90:0,26,396	0/0:17,0:17:32.93:0,33,466	0/0:4,0:4:12.04:0,12,196	0/0:9,0:9:27.08:0,27,416	0/0:4,0:4:12.04:0,12,195	0/0:8,0:8:24.08:0,24,373	0/0:13,0:13:39.12:0,39,611	0/0:17,0:17:45.15:0,45,730	0/0:12,0:12:30.10:0,30,489
chr10	77541661	.	T	TC	178.10	PASS	AB=0.585;AC=1;AF=0.018;AN=56;BaseQRankSum=6.519;DP=323;FS=2.251;HRun=0;HaplotypeScore=62.7882;InbreedingCoeff=0.0275;MQ=84.97;MQ0=0;MQRankSum=-5.767;QD=7.42;ReadPosRankSum=1.408;VQSLOD=3.1036;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:33.56:0,34,443	0/0:3,0:3:9.03:0,9,126	0/0:14,0:13:39.12:0,39,527	0/0:13,0:13:33.06:0,33,426	0/0:12,0:12:36.12:0,36,503	0/0:19,0:19:45.61:0,46,611	0/0:9,0:9:27.09:0,27,377	0/1:7,17:24:14.41:253,0,14	0/0:9,0:9:27.09:0,27,377	0/0:8,0:8:23.94:0,24,289	0/0:14,0:14:38.75:0,39,487	0/0:5,0:5:15.05:0,15,209	0/0:6,0:6:18.06:0,18,250	0/0:5,0:5:15.05:0,15,210	0/0:10,0:10:30.08:0,30,383	0/0:13,0:13:33.11:0,33,461	0/0:10,0:10:24.08:0,24,335	0/0:19,0:19:57.13:0,57,754	0/0:22,0:22:63.21:0,63,880	0/0:10,0:10:28.77:0,29,355	0/0:16,0:16:28.03:0,28,378	0/0:4,0:4:12.04:0,12,168	0/0:8,0:8:24.08:0,24,336	0/0:4,0:4:12.04:0,12,168	0/0:8,0:8:24.08:0,24,335	0/0:12,0:12:36.12:0,36,503	0/0:17,0:17:45.15:0,45,629	0/0:12,0:12:30.10:0,30,419
chr10	77541667	.	CTTATTA	C	3825.70	PASS	AB=0.867;AC=29;AF=0.558;AN=52;BaseQRankSum=3.058;DP=320;FS=2.497;HRun=0;HaplotypeScore=80.1135;InbreedingCoeff=0.7513;MQ=76.48;MQ0=0;MQRankSum=-3.541;QD=19.72;ReadPosRankSum=1.522;VQSLOD=2.7630;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,7:15:12.04:248,12,0	1/1:1,2:3:6.02:119,6,0	0/0:10,0:9:2.99:0,3,23	./.	0/0:12,0:12:21.07:0,21,597	1/1:5,12:18:27.09:532,27,0	1/1:7,2:9:3.01:62,3,0	0/0:36,0:33:51.15:0,51,1030	0/0:8,0:8:9:0,9,168	1/1:5,3:8:9.02:150,9,0	1/1:6,8:14:18.06:315,18,0	0/0:6,0:6:9.03:0,9,269	0/0:6,0:6:9.03:0,9,291	0/0:5,0:5:6.02:0,6,143	0/0:11,0:11:18.06:0,18,532	1/1:6,7:13:15.05:311,15,0	1/1:8,2:10:1.30:59,1,0	1/1:10,9:19:26.92:484,27,0	1/1:14,8:22:24.08:492,24,0	1/1:6,4:10:12.04:247,12,0	0/1:11,2:13:0:0,0,0	./.	0/0:8,0:8:9.03:0,9,212	0/0:4,0:4:3.01:0,3,98	0/0:7,0:7:15.05:0,15,464	1/1:5,7:12:18.06:371,18,0	1/1:8,8:16:15.05:310,15,0	1/1:9,3:12:6.02:124,6,0
chr10	77542160	.	TG	T	853.14	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.986;DP=486;FS=23.438;HRun=1;HaplotypeScore=46.2906;InbreedingCoeff=0.9714;MQ=77.65;MQ0=0;MQRankSum=-0.138;QD=31.60;ReadPosRankSum=-3.990;VQSLOD=1.0878;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.23:0,84,1192	0/0:6,0:6:18.06:0,18,269	0/0:17,0:16:34.53:0,35,521	0/0:21,0:21:54.18:0,54,808	0/0:20,0:20:60.14:0,60,814	0/0:22,0:22:66.21:0,66,965	0/0:22,0:22:66.18:0,66,924	1/1:1,26:27:78.12:948,78,0	0/0:13,0:13:36.12:0,36,538	0/0:24,0:24:69.23:0,69,1009	0/0:8,0:8:24.06:0,24,311	0/0:18,0:18:54.07:0,54,730	0/0:15,0:15:45.14:0,45,653	0/0:12,0:12:36.12:0,36,535	0/0:21,0:21:63.15:0,63,878	0/0:14,0:14:42.13:0,42,608	0/0:34,0:34:99:0,102,1431	0/0:9,0:9:24.03:0,24,329	0/0:24,0:24:69.22:0,69,1011	0/0:5,0:5:15.03:0,15,202	0/0:25,0:25:75.24:0,75,1101	0/0:10,0:10:30.10:0,30,449	0/0:12,0:12:36.12:0,36,538	0/0:19,0:19:57.18:0,57,832	0/0:12,0:12:33.11:0,33,494	0/0:18,0:18:51.15:0,51,724	0/0:12,0:12:36.07:0,36,475	0/0:18,0:18:54.18:0,54,805
chr10	77542302	.	TTAAAAAAAAAAACAA	T	1095.43	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=-1.320;DP=275;FS=28.876;HRun=0;HaplotypeScore=86.9243;InbreedingCoeff=0.0748;MQ=69.30;MQ0=23;MQRankSum=2.347;QD=11.53;ReadPosRankSum=-0.442;VQSLOD=0.1351;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:63.14:0,63,3202	0/1:2,0:2:20.57:21,0,144	0/0:43,0:9:8.13:0,8,314	0/0:41,0:11:20.14:0,20,463	0/0:13,0:12:27.03:0,27,686	0/1:3,0:3:14.82:15,0,308	1/1:6,0:6:18:166,18,0	1/1:0,17:17:43.46:519,43,0	0/0:2,0:2:6.01:0,6,222	0/1:5,0:5:82.09:82,0,180	0/1:9,0:8:99:117,0,242	0/0:11,0:10:30.03:0,30,1018	0/0:6,0:5:15.02:0,15,534	0/0:5,0:5:14.60:0,15,244	0/0:4,0:4:12.02:0,12,189	0/1:3,0:3:45.02:45,0,144	0/1:12,0:10:25.42:25,0,832	0/1:9,0:9:1.90:2,0,681	0/1:13,0:9:28.16:28,0,855	1/1:7,0:6:15.02:160,15,0	0/0:1,0:1:3.01:0,3,153	0/0:3,0:2:5.99:0,6,48	0/0:8,0:7:20.99:0,21,303	0/0:2,0:2:6:0,6,221	0/0:9,0:9:12.03:0,12,264	0/1:7,0:7:65.96:66,0,286	0/1:2,0:2:19.63:20,0,160	0/0:10,0:10:24.08:0,24,851
chr10	77542311	.	AAAAC	A	714.64	PASS	AB=1.000;AC=20;AF=0.370;AN=54;BaseQRankSum=-1.161;DP=325;FS=0.000;HRun=0;HaplotypeScore=58.3890;InbreedingCoeff=0.0581;MQ=62.03;MQ0=26;MQRankSum=3.670;QD=4.70;ReadPosRankSum=-3.781;VQSLOD=0.3054;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:49.89:0,50,740	0/0:1,0:1:2.98:0,3,22	0/0:60,0:14:7.26:0,7,84	0/0:52,0:16:8.39:0,8,158	1/1:14,0:13:18.04:133,18,0	0/0:8,0:8:18.41:0,18,201	0/1:9,0:9:36.92:37,0,93	1/1:17,0:17:29.83:223,30,0	0/0:3,0:3:3:0,3,29	0/1:8,0:8:48.73:49,0,130	0/1:7,0:6:19.84:71,0,20	0/0:6,0:5:14.95:0,15,125	0/0:5,0:4:11.75:0,12,86	0/0:3,0:3:4.40:0,4,28	1/1:4,0:4:11.94:93,12,0	0/1:3,0:3:6.58:7,0,58	0/1:19,0:16:8.16:8,0,301	0/1:14,0:14:24.70:25,0,225	0/1:19,0:15:4.57:5,0,361	1/1:3,0:1:3:27,3,0	0/0:4,0:4:6.48:0,6,59	./.	0/0:3,0:2:2.88:0,3,33	0/0:1,0:1:3:0,3,29	1/1:3,7:10:8.94:89,9,0	0/1:9,0:9:36.40:36,0,133	0/1:2,0:2:19.75:20,0,29	0/1:14,0:13:58.81:59,0,78
chr10	77542313	.	AAC	A	1094.15	PASS	AB=1.000;AC=32;AF=0.593;AN=54;BaseQRankSum=-2.391;DP=327;FS=0.000;HRun=0;HaplotypeScore=49.7231;InbreedingCoeff=0.0994;MQ=61.83;MQ0=26;MQRankSum=2.597;QD=6.47;ReadPosRankSum=-4.618;VQSLOD=1.3159;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:12.50:0,13,382	1/1:1,0:1:1.55:4,2,0	0/0:62,0:16:1.38:0,1,81	0/0:52,0:15:5.34:0,5,85	1/1:0,14:13:29.68:201,30,0	0/0:8,0:8:0.14:0,0,34	0/1:8,0:8:0.15:54,0,0	1/1:17,0:17:30.30:223,30,0	0/0:3,0:3:1.55:0,2,4	0/1:8,0:8:17.36:58,0,17	1/1:7,0:6:15.67:106,16,0	1/1:7,0:6:1.05:21,1,0	1/1:5,0:4:1.24:20,1,0	1/1:3,0:3:3.89:29,4,0	1/1:4,0:4:11.94:94,12,0	0/1:3,0:3:9.37:11,0,9	0/1:19,0:16:36.57:37,0,53	0/1:14,0:14:50.73:51,0,54	0/1:19,0:15:11.56:12,0,67	1/1:3,0:1:3:27,3,0	0/0:4,0:4:1.91:0,2,8	./.	0/0:3,0:2:2.24:0,2,8	1/1:2,0:2:0.94:22,1,0	1/1:9,1:10:8.98:78,9,0	0/1:9,0:9:9.52:63,0,10	0/1:2,0:2:4.22:20,0,4	1/1:14,0:13:18.56:111,19,0
chr10	77542492	.	AT	A	138.98	PASS	AB=0.763;AC=2;AF=0.037;AN=54;BaseQRankSum=5.075;DP=300;FS=1.195;HRun=1;HaplotypeScore=29.3313;InbreedingCoeff=-0.0593;MQ=53.35;MQ0=9;MQRankSum=-2.850;QD=4.79;ReadPosRankSum=-0.938;VQSLOD=0.1514;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:68.95:0,69,1213	0/0:4,0:4:9.03:0,9,144	./.	0/0:9,0:2:6.02:0,6,94	0/0:17,0:17:51.13:0,51,711	0/0:11,0:11:33.09:0,33,480	0/0:10,0:9:27.08:0,27,408	0/1:9,12:13:99:211,0,171	0/1:7,1:8:11.51:12,0,244	0/0:9,0:9:27.08:0,27,387	0/0:9,0:9:27.07:0,27,363	0/0:9,0:9:27.08:0,27,407	0/0:3,0:3:9.01:0,9,120	0/0:2,0:2:6.02:0,6,96	0/0:13,0:13:39.12:0,39,600	0/0:9,0:9:24:0,24,307	0/0:22,0:22:63.21:0,63,1007	0/0:15,0:15:33.05:0,33,615	0/0:16,0:15:45.15:0,45,719	0/0:8,0:8:24.07:0,24,349	0/0:6,0:6:18.03:0,18,240	0/0:2,0:2:6.02:0,6,96	0/0:5,0:5:15.05:0,15,234	0/0:2,0:2:6.02:0,6,96	0/0:15,0:15:45.14:0,45,697	0/0:16,0:16:48.14:0,48,724	0/0:9,0:9:27.07:0,27,374	0/0:11,0:11:33.11:0,33,505
chr10	77542874	.	TTTTA	T	7085.44	PASS	AB=1.000;AC=40;AF=0.741;AN=54;BaseQRankSum=-4.985;DP=429;FS=18.796;HRun=0;HaplotypeScore=88.1927;InbreedingCoeff=0.5157;MQ=56.45;MQ0=5;MQRankSum=-1.943;QD=20.48;ReadPosRankSum=-0.678;VQSLOD=2.6684;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:75.25:0,75,1819	1/1:0,10:9:24.01:381,24,0	0/0:7,0:4:6.02:0,6,117	0/1:11,0:6:0.35:0,0,81	0/1:41,0:41:12.75:13,0,400	1/1:2,16:18:36.12:624,36,0	1/1:2,8:10:12.04:208,12,0	./.	0/1:12,0:11:9.99:29,0,10	1/1:6,16:22:45.12:726,45,0	1/1:4,18:22:39.09:645,39,0	0/1:16,0:16:25.80:26,0,27	1/1:5,0:5:2.38:25,2,0	1/1:7,0:7:4.56:46,5,0	0/0:12,0:12:20.97:0,21,125	1/1:3,11:14:29.69:478,30,0	1/1:5,17:22:34.45:576,34,0	1/1:2,11:12:27.09:469,27,0	1/1:8,15:21:45.12:689,45,0	1/1:3,11:14:15.01:227,15,0	1/1:3,6:9:12.04:208,12,0	1/1:6,0:6:2.39:17,2,0	0/0:10,0:10:4.38:0,4,14	1/1:15,0:14:2.60:32,3,0	0/0:22,0:21:41.60:0,42,281	1/1:6,14:19:42.13:686,42,0	1/1:7,12:19:24.04:385,24,0	1/1:6,11:17:36.11:597,36,0
chr10	77542884	.	TTA	T	5873.70	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=2.607;DP=544;FS=2.694;HRun=0;HaplotypeScore=116.2037;InbreedingCoeff=0.4724;MQ=45.16;MQ0=11;MQRankSum=-0.774;QD=12.04;ReadPosRankSum=1.699;VQSLOD=4.8428;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:34:74.42:0,74,1240	1/1:15,0:13:8.79:157,9,0	0/0:5,0:2:5.97:0,6,70	0/0:10,0:5:11.79:0,12,97	1/1:45,1:44:75.41:514,75,0	1/1:22,0:22:39.83:265,40,0	0/1:12,0:12:14.10:79,0,14	0/1:4,0:3:1.93:2,0,12	1/1:13,3:14:21.51:216,22,0	1/1:20,0:18:19.74:262,20,0	1/1:31,0:31:26.51:313,27,0	1/1:10,11:20:41.05:547,41,0	1/1:8,3:10:0.41:150,0,0	1/1:9,5:14:24.16:259,24,0	1/1:15,1:16:33.64:204,34,0	1/1:12,0:12:29.63:199,30,0	1/1:34,0:28:19.74:261,20,0	1/1:17,0:15:28.07:185,28,0	0/1:24,0:19:13.93:256,0,14	1/1:21,0:21:26.56:174,27,0	1/1:12,0:11:11.87:82,12,0	1/1:10,2:12:10.19:117,10,0	1/1:11,7:18:25.09:357,25,0	1/1:11,9:17:33.51:448,34,0	1/1:24,0:22:10.32:179,10,0	0/1:25,0:24:12.52:238,0,13	1/1:19,0:19:17.09:158,17,0	1/1:22,0:21:37.10:249,37,0
chr10	77542885	.	TA	T	6661.34	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=3.296;DP=540;FS=1.957;HRun=1;HaplotypeScore=107.0273;InbreedingCoeff=0.5616;MQ=44.91;MQ0=13;MQRankSum=-1.835;QD=13.73;ReadPosRankSum=1.308;VQSLOD=4.2228;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:33:41.31:0,41,933	1/1:15,0:13:11.08:139,11,0	0/0:5,0:2:5.05:0,5,46	0/0:10,0:5:4.78:0,5,57	1/1:19,26:43:99:1241,104,0	1/1:22,0:22:46.97:253,47,0	0/1:12,0:12:9.37:90,0,9	0/1:4,0:3:0.03:47,0,0	1/1:15,1:14:24.83:185,25,0	1/1:20,0:18:24.48:208,24,0	1/1:32,0:32:37.24:349,37,0	1/1:19,2:20:52.31:416,52,0	1/1:11,0:10:20.20:120,20,0	1/1:14,0:14:38.58:271,39,0	1/1:5,11:16:38.91:414,39,0	1/1:12,0:12:28.60:150,29,0	1/1:34,0:28:23.60:272,24,0	1/1:17,0:15:29.87:155,30,0	0/1:23,0:18:18.63:189,0,19	1/1:21,0:21:38.61:239,39,0	1/1:13,0:11:20.72:117,21,0	1/1:12,0:12:22.68:125,23,0	1/1:18,0:18:35.73:234,36,0	1/1:21,0:17:33.62:239,34,0	1/1:10,14:22:42.02:605,42,0	1/1:24,0:23:21.81:227,22,0	1/1:17,0:17:15.13:163,15,0	1/1:21,0:20:42.10:213,42,0
chr10	77543544	.	G	GTT	16735.48	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-0.466;DP=645;FS=6.970;HRun=9;HaplotypeScore=138.3668;InbreedingCoeff=0.8650;MQ=61.54;MQ0=3;MQRankSum=-6.917;QD=31.05;ReadPosRankSum=-0.655;VQSLOD=3.5180;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.14:0,69,726	1/1:9,5:14:26.97:331,27,0	0/0:32,0:20:16.43:0,16,324	0/0:24,0:16:30.03:0,30,312	0/1:27,0:27:8.52:9,0,123	1/1:7,13:19:54.16:756,54,0	1/1:10,7:17:38.66:477,39,0	1/1:16,12:29:56.80:870,57,0	1/1:5,10:16:45.13:641,45,0	1/1:14,15:30:71.63:954,72,0	1/1:2,20:23:62.57:868,63,0	1/1:10,14:25:71.36:873,71,0	1/1:5,13:19:50.65:722,51,0	1/1:7,7:17:47.08:554,47,0	1/1:8,17:27:74.48:980,74,0	1/1:9,19:29:42.76:994,43,0	1/1:7,16:22:57.11:812,57,0	1/1:13,12:25:60.12:828,60,0	1/1:14,9:25:55.45:688,55,0	1/1:8,17:26:65.38:910,65,0	1/1:8,4:12:12:153,12,0	1/1:9,15:23:59.42:815,59,0	1/1:5,10:16:39:518,39,0	1/1:5,10:15:30.52:411,31,0	0/0:24,0:24:11.55:0,12,101	1/1:15,20:35:76.99:1200,77,0	1/1:12,18:30:63.18:907,63,0	1/1:6,7:13:33.10:466,33,0
chr10	77543552	.	TTG	T	2014.70	PASS	AB=0.931;AC=24;AF=0.429;AN=56;BaseQRankSum=-7.105;DP=648;FS=1.677;HRun=0;HaplotypeScore=187.0627;InbreedingCoeff=-0.4640;MQ=55.00;MQ0=7;MQRankSum=5.002;QD=4.04;ReadPosRankSum=-8.402;VQSLOD=0.3008;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.15:0,81,1246	0/0:11,1:12:10.66:0,11,215	0/0:34,0:16:12.26:0,12,467	0/0:25,0:13:26.25:0,26,410	1/1:28,0:28:36.05:341,36,0	0/1:19,1:18:72.28:96,0,72	0/1:18,1:19:8.49:8,0,243	0/1:26,4:30:99:196,0,285	0/1:16,1:17:56.78:57,0,106	0/1:26,4:30:99:163,0,254	0/0:22,0:22:51.47:0,51,312	0/1:27,2:28:14.30:14,0,343	0/1:18,0:18:32.62:33,0,119	0/1:17,1:18:99:153,0,130	0/0:28,0:28:7.25:0,7,304	0/1:29,2:31:29.97:30,0,357	0/1:23,0:22:34.01:34,0,161	0/1:24,3:27:99:150,0,277	0/1:20,3:23:99:159,0,158	0/1:27,2:29:31.68:32,0,238	0/1:8,0:8:20.43:20,0,73	0/1:18,4:21:34.05:34,0,152	0/1:13,1:14:38.24:38,0,100	0/1:14,1:15:15.82:16,0,130	1/1:23,0:23:46.49:280,46,0	0/1:31,2:33:99:123,0,268	0/1:25,0:25:28.27:28,0,156	0/1:13,4:17:99:176,0,102
chr10	77543557	.	TG	T	351.59	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.548;DP=646;FS=10.688;HRun=1;HaplotypeScore=188.4748;InbreedingCoeff=0.8855;MQ=52.09;MQ0=7;MQRankSum=0.788;QD=7.32;ReadPosRankSum=-1.156;VQSLOD=-0.6633;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:73.80:0,74,1232	0/0:13,0:13:39.13:0,39,540	0/0:36,2:19:0.96:0,1,526	0/0:22,0:10:26.57:0,27,348	1/1:23,2:25:23.84:229,24,0	0/0:18,0:17:48.13:0,48,588	0/0:19,0:19:37.13:0,37,630	0/0:30,0:30:57.90:0,58,988	0/0:19,0:19:53.78:0,54,653	0/0:32,0:32:86.20:0,86,1084	0/0:24,0:24:69.63:0,70,833	0/0:30,0:29:71.98:0,72,872	0/0:18,0:18:54.02:0,54,610	0/0:15,0:15:25.49:0,25,474	0/0:26,0:26:77.22:0,77,881	0/0:31,0:31:84.43:0,84,1123	0/0:24,1:24:41.62:0,42,736	0/0:26,0:26:58.03:0,58,883	0/0:23,1:23:36.31:0,36,611	0/0:29,0:29:54.77:0,55,947	0/0:9,0:9:19.04:0,19,215	0/0:22,0:21:55.37:0,55,675	0/0:14,0:14:26.08:0,26,392	0/0:16,0:16:32.97:0,33,406	1/1:23,0:23:43.13:243,43,0	0/0:32,0:32:91.56:0,92,1195	0/0:21,0:21:60.07:0,60,702	0/0:16,0:16:44.90:0,45,545
chr10	77543558	.	GTTT	G	1477.65	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.072;DP=649;FS=0.626;HRun=3;HaplotypeScore=206.9651;InbreedingCoeff=0.9974;MQ=51.24;MQ0=7;MQRankSum=0.301;QD=30.78;ReadPosRankSum=1.059;VQSLOD=1.4974;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:87.27:0,87,1887	0/0:13,0:13:39.13:0,39,772	0/0:38,0:19:39.82:0,40,877	0/0:21,0:9:24.08:0,24,554	1/1:4,21:25:56.83:844,57,0	0/0:19,0:18:46.97:0,47,887	0/0:19,0:19:54.18:0,54,1017	0/0:30,0:30:80.96:0,81,1474	0/0:19,0:19:57.19:0,57,1028	0/0:32,0:32:89.72:0,90,1640	0/0:24,0:24:72.24:0,72,1440	0/0:30,0:29:81.31:0,81,1524	0/0:18,0:18:54.17:0,54,1044	0/0:16,0:16:45.11:0,45,831	0/0:27,0:27:78.24:0,78,1509	0/0:30,0:30:90.31:0,90,1764	0/0:24,0:23:60.20:0,60,1188	0/0:28,0:28:79.61:0,80,1390	0/0:25,0:24:63.46:0,63,1079	0/0:29,0:29:81.10:0,81,1514	0/0:9,0:9:22.89:0,23,378	0/0:22,0:21:59:0,59,1143	0/0:14,0:14:39.13:0,39,734	0/0:16,0:16:36.52:0,37,672	1/1:2,21:23:47.95:755,48,0	0/0:32,0:32:95.13:0,95,1825	0/0:21,0:21:60.21:0,60,1188	0/0:16,0:16:44.34:0,44,657
chr10	77543567	.	TG	T	14249.07	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=5.196;DP=634;FS=1.033;HRun=3;HaplotypeScore=132.1066;InbreedingCoeff=0.9808;MQ=52.58;MQ0=8;MQRankSum=-4.837;QD=26.44;ReadPosRankSum=2.789;VQSLOD=4.1815;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.13:0,84,1106	1/1:2,11:13:39.10:456,39,0	0/0:40,0:19:39.18:0,39,526	0/0:25,1:14:22.44:0,22,319	1/1:27,0:27:15.35:147,15,0	1/1:2,13:14:39.11:463,39,0	1/1:5,12:18:45.01:490,45,0	1/1:6,17:23:60.11:658,60,0	1/1:3,15:18:48.08:556,48,0	1/1:5,25:30:70.73:854,71,0	1/1:8,19:27:68.98:755,69,0	1/1:6,22:27:71.75:788,72,0	1/1:3,16:19:47.87:539,48,0	1/1:2,12:14:35.85:417,36,0	1/1:2,28:31:67.08:798,67,0	1/1:5,25:30:81.71:945,82,0	1/1:3,20:22:51.02:574,51,0	1/1:6,19:25:57.01:632,57,0	1/1:6,14:18:51.13:594,51,0	1/1:5,24:29:77.98:842,78,0	1/1:3,9:12:17.97:250,18,0	1/1:5,15:20:50.98:561,51,0	1/1:5,12:17:37.97:403,38,0	1/1:5,11:16:30.05:331,30,0	1/1:21,0:21:13.27:126,13,0	1/1:5,28:33:93.24:1095,93,0	1/1:3,17:20:60.17:717,60,0	1/1:2,7:9:21.07:258,21,0
chr10	77544554	.	TTATATATATATATATATATATATATATATA	T	15300.26	PASS	AB=1.000;AC=45;AF=0.900;AN=50;BaseQRankSum=1.973;DP=273;FS=0.000;HRun=0;HaplotypeScore=202.5711;InbreedingCoeff=0.3031;MQ=61.28;MQ0=2;MQRankSum=-2.695;QD=60.48;ReadPosRankSum=2.184;VQSLOD=3.8408;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:6.01:0,6,167	1/1:4,3:7:9.03:665,9,0	./.	0/1:13,0:5:16.61:17,0,187	0/0:2,0:2:3.01:0,3,44	1/1:6,10:15:21.07:1517,21,0	1/1:2,6:8:6.02:431,6,0	1/1:29,0:28:12.03:207,12,0	1/1:5,4:9:12.04:902,12,0	1/1:13,9:22:24.05:1106,24,0	1/1:3,5:8:15.05:951,15,0	1/1:4,5:9:12.04:872,12,0	1/1:4,5:9:9.03:686,9,0	1/1:4,2:6:3.01:233,3,0	1/1:3,5:8:6.02:451,6,0	1/1:3,3:6:9.03:688,9,0	1/1:6,5:11:6.02:336,6,0	1/1:7,3:10:6.02:467,6,0	1/1:12,6:18:18.06:1093,18,0	1/1:5,10:15:30.07:1401,30,0	./.	1/1:4,1:5:3.01:162,3,0	1/1:5,4:9:3.01:213,3,0	1/1:2,0:2:3.01:58,3,0	./.	1/1:4,7:11:21.01:1003,21,0	1/1:4,8:12:15.05:1150,15,0	1/1:6,4:10:9.03:691,9,0
chr10	77544583	.	TA	T	985.59	PASS	AC=42;AF=0.840;AN=50;BaseQRankSum=3.168;DP=131;FS=15.328;HRun=1;HaplotypeScore=99.0272;InbreedingCoeff=0.4591;MQ=66.74;MQ0=6;MQRankSum=-2.638;QD=8.50;ReadPosRankSum=2.351;VQSLOD=-0.1900;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:1:3.01:0,3,39	1/1:3,0:3:7.43:38,7,0	0/0:5,0:3:3.01:0,3,38	0/0:8,0:3:3.40:0,3,18	./.	1/1:10,0:10:18.42:96,18,0	1/1:6,0:6:5.78:31,6,0	1/1:4,6:6:12.03:135,12,0	1/1:4,0:4:10.37:54,10,0	1/1:9,0:9:15.60:89,16,0	1/1:5,0:5:13.99:93,14,0	1/1:5,0:5:9.63:42,10,0	1/1:5,0:5:7.28:28,7,0	1/1:2,0:2:2.22:7,2,0	1/1:5,0:5:5.20:28,5,0	1/1:3,0:3:7.28:29,7,0	1/1:5,0:5:2.22:7,2,0	1/1:3,0:3:4.59:15,5,0	1/1:6,0:6:14.86:82,15,0	1/1:10,0:10:19.29:140,19,0	./.	1/1:1,0:1:2.92:17,3,0	1/1:4,0:4:2.98:22,3,0	./.	0/0:1,0:1:3.01:0,3,38	1/1:7,0:7:14.86:76,15,0	1/1:8,0:8:11.86:50,12,0	1/1:5,0:4:7.32:29,7,0
chr10	77546000	.	GAAAAAAAAAAAAAGAAAAGAAA	G	5034.10	PASS	AB=0.990;AC=41;AF=0.732;AN=56;BaseQRankSum=-3.920;DP=326;FS=51.091;HRun=0;HaplotypeScore=118.4433;InbreedingCoeff=0.4173;MQ=36.19;MQ0=40;MQRankSum=5.415;QD=22.78;ReadPosRankSum=-5.657;VQSLOD=-0.6114;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:12:27.56:0,28,1084	1/1:3,0:3:9.03:163,9,0	0/0:32,0:5:14.64:0,15,335	0/0:35,0:5:9.92:0,10,343	0/0:16,0:13:29.31:0,29,897	1/1:7,0:7:15:308,15,0	0/1:8,0:6:1.21:104,0,1	0/0:7,0:5:5.14:0,5,87	1/1:9,0:8:14.90:115,15,0	1/1:11,0:10:27.01:492,27,0	1/1:11,0:11:23.98:419,24,0	1/1:5,0:4:4.19:27,4,0	0/1:4,0:4:13.80:18,0,14	1/1:10,0:8:6.02:99,6,0	1/1:7,0:7:15.05:335,15,0	1/1:10,0:10:1.46:356,1,0	0/1:18,1:16:23.61:310,0,24	0/1:19,0:13:23.43:137,0,23	1/1:9,0:6:11.98:243,12,0	1/1:14,0:12:27:513,27,0	1/1:3,0:2:6.02:113,6,0	1/1:11,0:11:16.51:134,17,0	1/1:3,0:4:8.76:54,9,0	1/1:10,0:9:13.45:103,13,0	0/1:11,0:10:29.98:30,0,985	1/1:6,0:5:15.05:296,15,0	1/1:19,0:16:23.92:444,24,0	1/1:4,7:8:6.02:223,6,0
chr10	77546010	.	A	AG	500.91	PASS	AB=0.667;AC=3;AF=0.054;AN=56;BaseQRankSum=-3.119;DP=325;FS=3.210;HRun=0;HaplotypeScore=63.7519;InbreedingCoeff=0.3292;MQ=48.45;MQ0=36;MQRankSum=-1.826;QD=16.70;ReadPosRankSum=1.170;VQSLOD=5.3514;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:11:26.83:0,27,228	0/0:4,0:4:8.93:0,9,66	0/0:36,0:8:2.49:0,2,101	0/0:41,0:6:9.46:0,9,103	0/1:8,8:15:22.23:285,0,22	0/0:8,0:8:17.48:0,17,100	0/0:5,0:4:8.43:0,8,49	0/0:5,0:3:8.79:0,9,53	0/0:9,0:8:13.22:0,13,104	0/0:12,0:11:24.04:0,24,175	0/0:13,0:13:35.49:0,35,231	0/0:5,0:4:9:0,9,79	0/0:4,0:4:5.94:0,6,45	0/0:12,0:10:5.93:0,6,40	0/0:6,0:6:14.84:0,15,109	0/0:8,0:8:14.31:0,14,90	0/0:15,0:12:29.13:0,29,165	0/0:11,0:7:11.45:0,11,80	0/0:12,0:7:20.92:0,21,163	0/0:12,0:10:29.64:0,30,210	0/0:3,0:2:5.74:0,6,31	0/0:11,0:11:23.57:0,24,177	0/0:6,0:6:16.13:0,16,112	0/0:9,0:9:17.21:0,17,123	1/1:8,6:13:14.84:317,15,0	0/0:8,0:7:20.92:0,21,164	0/0:15,0:12:21.65:0,22,141	0/0:11,0:9:5.68:0,6,37
chr10	77546012	.	AAG	A	95.09	PASS	AB=0.980;AC=19;AF=0.339;AN=56;BaseQRankSum=2.266;DP=321;FS=3.433;HRun=0;HaplotypeScore=63.7931;InbreedingCoeff=0.0171;MQ=49.19;MQ0=30;MQRankSum=0.466;QD=0.67;ReadPosRankSum=-0.950;VQSLOD=0.6539;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:11:17.38:17,0,149	0/1:4,0:4:11.57:12,0,13	0/0:36,0:8:19.46:0,19,128	0/0:41,0:6:11.73:0,12,142	0/0:16,0:15:2.43:0,2,99	0/1:8,0:8:0.14:34,0,0	0/0:5,0:4:2.55:0,3,17	0/1:5,0:3:8.63:9,0,9	0/0:9,0:8:14.03:0,14,112	0/1:11,0:11:14.96:15,0,40	0/1:13,0:13:12.65:13,0,49	1/1:4,0:4:2.99:26,3,0	0/0:4,0:4:3:0,3,25	0/1:12,0:10:2.57:3,0,6	0/1:5,1:6:5.93:6,0,14	0/1:8,0:8:2.86:3,0,7	0/1:13,0:12:20.68:21,0,42	1/1:8,1:7:10.71:38,11,0	0/1:12,0:7:6.42:6,0,30	0/0:12,0:10:8.33:0,8,74	0/1:3,0:2:2.76:3,0,6	0/0:12,0:12:16.99:0,17,134	0/0:7,0:7:19.67:0,20,126	0/0:8,0:8:9.83:0,10,128	0/0:15,0:14:19.88:0,20,106	0/1:7,1:7:11.16:11,0,21	0/0:15,0:12:9.26:0,9,51	1/1:10,1:9:5.72:30,6,0
chr10	77546019	.	GAAA	G	4262.65	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-4.793;DP=325;FS=5.533;HRun=13;HaplotypeScore=56.7738;InbreedingCoeff=0.8193;MQ=53.69;MQ0=22;MQRankSum=-2.463;QD=22.55;ReadPosRankSum=1.416;VQSLOD=3.4994;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:11:26.94:0,27,331	1/1:1,3:4:11.90:120,12,0	0/0:38,0:10:11.83:0,12,109	0/0:40,0:7:9.03:0,9,141	1/1:10,4:14:18.93:232,19,0	1/1:9,0:9:20.80:229,21,0	1/1:1,5:5:9.03:107,9,0	1/1:5,0:5:12.02:144,12,0	0/0:0,0:8:6.23:0,6,15	1/1:0,14:14:39.10:450,39,0	1/1:2,11:13:36.11:432,36,0	0/0:3,0:3:5.47:0,5,28	0/0:0,0:4:1.25:0,1,3	1/1:2,12:12:6.02:72,6,0	1/1:2,4:6:14.78:157,15,0	1/1:1,7:8:15.25:155,15,0	1/1:7,3:10:27.05:301,27,0	1/1:5,1:6:14.45:131,14,0	1/1:6,8:9:20.53:233,21,0	1/1:7,6:12:33.08:394,33,0	1/1:3,0:3:6.02:72,6,0	0/0:0,0:13:11.21:0,11,26	0/0:5,0:8:8.72:0,9,20	0/0:1,0:8:7.12:0,7,16	1/1:9,5:13:32.99:380,33,0	1/1:2,6:7:20.98:235,21,0	1/1:4,13:14:27.08:320,27,0	1/1:11,0:10:9.02:98,9,0
chr10	77546022	.	A	AAG	3140.63	PASS	AB=0.807;AC=35;AF=0.625;AN=56;BaseQRankSum=-4.902;DP=331;FS=6.150;HRun=0;HaplotypeScore=57.6279;InbreedingCoeff=0.6880;MQ=54.48;MQ0=21;MQRankSum=-0.056;QD=16.27;ReadPosRankSum=2.378;VQSLOD=2.6262;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:10:26.52:0,27,238	1/1:4,0:4:11.90:119,12,0	0/0:39,0:11:25.98:0,26,183	0/0:39,0:7:14.82:0,15,163	0/1:13,1:14:33.18:77,0,33	1/1:2,7:9:19.82:187,20,0	1/1:6,0:5:9.03:107,9,0	0/1:2,5:8:1.70:131,0,2	0/0:9,0:8:6.18:0,6,15	1/1:14,0:14:38.84:424,39,0	1/1:11,2:13:35.60:332,36,0	0/0:4,0:4:10.22:0,10,75	0/0:6,0:6:7.24:0,7,53	1/1:14,0:12:6.02:72,6,0	1/1:6,1:7:8.43:114,8,0	1/1:8,0:8:4.06:73,4,0	1/1:9,1:10:20.25:194,20,0	1/1:5,1:6:14.45:128,14,0	1/1:13,0:9:13.17:202,13,0	1/1:11,2:12:32.75:366,33,0	1/1:0,3:3:6.02:66,6,0	0/0:13,0:13:14.12:0,14,62	0/0:8,0:8:13.31:0,13,66	0/0:8,0:8:6.70:0,7,15	1/1:12,3:14:25.32:183,25,0	1/1:8,0:7:12.98:185,13,0	1/1:17,0:14:27.08:317,27,0	0/1:10,1:10:1.77:60,0,2
chr10	77546681	.	TC	T	8086.37	PASS	AB=0.909;AC=53;AF=0.946;AN=56;BaseQRankSum=-5.466;DP=277;FS=113.597;HRun=2;HaplotypeScore=40.9306;InbreedingCoeff=0.5168;MQ=63.29;MQ0=6;MQRankSum=-5.244;QD=29.73;ReadPosRankSum=3.532;VQSLOD=-0.1481;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:21.07:270,21,0	1/1:0,7:7:18.06:233,18,0	0/0:5,0:3:15.03:0,15,154	0/1:9,1:7:12.49:12,0,117	1/1:0,11:11:18.23:233,18,0	1/1:0,9:8:21.07:272,21,0	1/1:0,19:18:42.10:544,42,0	1/1:0,14:14:36.12:466,36,0	1/1:0,8:8:24.08:310,24,0	1/1:0,10:10:30.10:388,30,0	1/1:0,6:6:18.06:233,18,0	1/1:0,18:18:42.14:544,42,0	1/1:0,9:8:21.07:272,21,0	1/1:0,12:12:33.11:427,33,0	1/1:0,10:10:30.10:388,30,0	1/1:0,13:13:36.12:466,36,0	1/1:0,8:8:18.06:233,18,0	1/1:0,12:12:30.10:388,30,0	1/1:0,5:5:15.05:194,15,0	1/1:0,6:6:15.05:194,15,0	1/1:0,20:18:27.09:349,27,0	1/1:0,5:5:12.04:155,12,0	1/1:0,6:6:8.73:116,9,0	1/1:0,7:7:9.03:117,9,0	1/1:0,6:5:12.04:155,12,0	1/1:1,18:19:54.18:700,54,0	1/1:0,10:10:27.09:349,27,0	1/1:0,2:2:6.02:78,6,0
chr10	77547484	.	GTGTGTGTGTGTC	G	4456.26	PASS	AB=0.994;AC=35;AF=0.625;AN=56;BaseQRankSum=-4.763;DP=697;FS=1.249;HRun=0;HaplotypeScore=236.8997;InbreedingCoeff=0.1899;MQ=57.36;MQ0=14;MQRankSum=-1.124;QD=8.69;ReadPosRankSum=-1.752;VQSLOD=3.5382;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:63.67:0,64,2714	1/1:9,1:10:20.86:288,21,0	0/0:40,0:24:2.47:0,2,148	0/0:43,0:21:7.23:0,7,174	0/1:23,0:23:98.13:98,0,976	1/1:14,0:14:3.01:50,3,0	1/1:35,0:35:7.95:69,8,0	0/1:22,0:20:91.17:91,0,421	0/1:31,0:31:40.19:40,0,1688	1/1:22,0:22:34.62:454,35,0	1/1:15,1:15:3.01:108,3,0	0/0:21,0:21:8.25:0,8,1674	0/1:28,0:28:52.01:52,0,1685	0/1:23,0:23:12.93:13,0,1417	0/1:23,0:23:99:104,0,1069	1/1:27,2:29:44.91:540,45,0	1/1:31,0:30:5.53:294,6,0	1/1:19,0:19:14.98:213,15,0	1/1:19,1:18:28.36:415,28,0	0/1:18,1:18:7.16:195,0,7	1/1:50,0:49:24.32:500,24,0	0/0:22,0:22:33.42:0,33,1622	0/1:15,0:15:32.78:33,0,1001	0/0:30,0:30:12.73:0,13,2096	0/1:20,0:20:59.43:59,0,664	1/1:31,0:30:65.32:566,65,0	1/1:23,0:22:7.90:147,8,0	1/1:9,0:9:18.71:130,19,0
chr10	77547486	.	GTGTGTGTGTC	G	6904.07	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=-8.437;DP=700;FS=3.881;HRun=0;HaplotypeScore=208.4507;InbreedingCoeff=0.2086;MQ=56.67;MQ0=17;MQRankSum=-2.183;QD=13.46;ReadPosRankSum=-4.526;VQSLOD=2.8154;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:66.67:0,67,2277	1/1:8,2:10:22.94:434,23,0	0/0:41,0:24:2.40:0,2,113	0/0:44,0:20:0.76:0,1,98	0/1:22,0:22:99:127,0,713	1/1:1,13:13:3.01:95,3,0	1/1:4,29:33:8.87:204,9,0	0/1:24,0:22:99:183,0,236	0/1:30,0:30:43.67:44,0,1324	1/1:21,2:23:64.95:689,65,0	1/1:4,12:15:3:74,3,0	0/0:21,0:21:6.08:0,6,1255	0/1:29,0:29:54.39:54,0,1280	0/1:23,0:23:16.75:17,0,1015	0/1:22,0:21:99:129,0,784	1/1:20,7:27:51.66:836,52,0	1/1:31,2:33:59.85:663,60,0	1/1:1,17:18:14.98:393,15,0	1/1:19,0:17:38.32:397,38,0	1/1:3,15:17:11.96:281,12,0	1/1:54,0:53:77.53:754,78,0	0/0:22,0:22:10.65:0,11,1169	0/1:15,0:15:35.79:36,0,744	0/0:30,0:30:12.24:0,12,1657	0/1:20,0:20:61.67:62,0,452	1/1:2,29:30:73.94:885,74,0	1/1:3,20:22:8.22:283,8,0	1/1:9,0:9:24:266,24,0
chr10	77547494	.	GTC	G	7018.06	PASS	AB=0.979;AC=43;AF=0.768;AN=56;BaseQRankSum=-3.885;DP=700;FS=0.000;HRun=0;HaplotypeScore=130.9550;InbreedingCoeff=0.1385;MQ=53.19;MQ0=20;MQRankSum=-1.585;QD=11.92;ReadPosRankSum=-6.057;VQSLOD=3.3084;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:54.22:0,54,804	1/1:9,0:9:23.45:180,23,0	0/0:33,0:12:3.28:0,3,115	0/0:45,0:15:1.56:0,2,86	0/1:23,0:23:8.15:278,0,8	1/1:14,0:13:2.97:20,3,0	1/1:30,0:30:8.79:56,9,0	1/1:23,0:21:59.36:422,59,0	0/1:24,0:24:37.99:134,0,38	1/1:28,0:28:80.54:645,81,0	1/1:15,0:14:2.96:19,3,0	0/1:23,0:23:11.58:236,0,12	0/1:25,1:26:26.54:242,0,27	0/1:24,1:25:5.16:294,0,5	1/1:23,0:22:32.72:397,33,0	1/1:27,1:28:53.60:400,54,0	1/1:34,1:34:74.44:552,74,0	1/1:17,1:18:14.78:95,15,0	1/1:18,0:17:44.54:318,45,0	1/1:17,1:17:11.81:75,12,0	1/1:56,0:55:98.49:812,98,0	0/1:23,1:24:28.67:221,0,29	1/1:15,2:17:1.11:245,1,0	0/1:30,1:30:69.32:244,0,69	1/1:18,1:19:36.52:285,37,0	1/1:30,0:29:74.27:572,74,0	1/1:21,0:20:8.44:60,8,0	1/1:9,0:9:26.94:218,27,0
chr10	77548350	.	GC	G	6988.11	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=-0.965;DP=450;FS=3.747;HRun=10;HaplotypeScore=53.8717;InbreedingCoeff=0.8303;MQ=73.76;MQ0=0;MQRankSum=-1.918;QD=17.83;ReadPosRankSum=4.497;VQSLOD=5.5042;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,1:21:38.75:0,39,382	1/1:2,6:8:17.99:156,18,0	0/1:14,0:15:5.76:6,0,141	0/1:12,0:12:0.68:1,0,131	0/0:8,0:8:11.99:0,12,119	1/1:2,15:17:32.99:286,33,0	1/1:1,14:15:38.99:339,39,0	1/1:8,16:24:41.97:365,42,0	1/1:3,9:12:20.99:180,21,0	1/1:4,14:18:44.96:387,45,0	1/1:2,9:11:20.98:182,21,0	1/1:1,11:12:32.99:286,33,0	1/1:1,13:14:35.99:312,36,0	1/1:2,11:14:35.02:292,35,0	0/0:16,0:16:27.07:0,27,299	1/1:2,16:18:47.99:417,48,0	1/1:1,20:21:56.98:495,57,0	1/1:1,6:7:18:156,18,0	1/1:5,9:14:20.82:170,21,0	1/1:2,12:14:34.23:289,34,0	1/1:8,21:29:59.97:521,60,0	1/1:5,14:19:35.97:312,36,0	1/1:5,17:22:38.91:331,39,0	1/1:2,11:13:26.99:234,27,0	0/0:13,0:13:33.05:0,33,352	1/1:4,26:30:71.96:621,72,0	1/1:5,20:25:56.96:495,57,0	1/1:1,7:8:18:156,18,0
chr10	77552057	.	CT	C	3411.54	PASS	AB=0.958;AC=46;AF=0.958;AN=48;BaseQRankSum=-0.913;DP=134;FS=10.982;HRun=2;HaplotypeScore=44.6810;InbreedingCoeff=0.0093;MQ=82.60;MQ0=2;MQRankSum=-1.858;QD=25.46;ReadPosRankSum=2.526;VQSLOD=2.0590;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:9:18.05:215,18,0	1/1:0,2:2:6.02:69,6,0	0/1:13,0:11:4.41:4,0,118	0/1:9,1:6:30.62:31,0,37	1/1:0,10:10:30.09:348,30,0	1/1:2,9:11:27.08:320,27,0	./.	1/1:2,11:12:33.11:422,33,0	./.	1/1:0,3:3:9.03:105,9,0	1/1:0,5:5:15.04:173,15,0	1/1:0,2:2:6.02:71,6,0	1/1:0,1:1:3.01:35,3,0	./.	1/1:0,4:4:12.04:142,12,0	1/1:0,3:3:9.03:104,9,0	1/1:0,3:3:6.01:63,6,0	1/1:0,2:2:3.01:37,3,0	1/1:2,3:4:9.03:109,9,0	1/1:0,6:6:15.04:177,15,0	1/1:0,1:1:3.01:37,3,0	1/1:1,2:3:6.02:68,6,0	1/1:0,4:4:12.04:140,12,0	./.	1/1:0,7:7:21.06:250,21,0	1/1:0,4:4:12.04:142,12,0	1/1:0,8:8:24.07:282,24,0	1/1:2,1:4:6.02:68,6,0
chr10	77552060	.	CT	C	1402.31	PASS	AC=40;AF=0.870;AN=46;BaseQRankSum=1.985;DP=129;FS=16.722;HRun=11;HaplotypeScore=50.2285;InbreedingCoeff=0.4901;MQ=83.56;MQ0=4;MQRankSum=-1.685;QD=15.08;ReadPosRankSum=2.394;VQSLOD=2.4932;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:9:17.86:129,18,0	1/1:1,1:2:2.96:21,3,0	0/0:12,1:11:5.91:0,6,61	0/0:9,0:6:3.35:0,3,16	1/1:1,9:10:26.73:187,27,0	1/1:1,9:10:26.80:192,27,0	./.	0/0:13,0:11:14.76:0,15,75	./.	1/1:0,3:3:8.91:63,9,0	1/1:0,5:5:14.84:102,15,0	1/1:0,2:2:5.95:42,6,0	./.	./.	1/1:0,4:4:11.89:85,12,0	1/1:2,1:3:5.33:29,5,0	1/1:0,3:3:5.85:35,6,0	1/1:1,2:2:2.98:23,3,0	1/1:3,2:4:5.98:47,6,0	1/1:2,4:6:8.92:65,9,0	1/1:0,1:1:2.99:23,3,0	1/1:1,1:2:2.97:21,3,0	1/1:1,3:4:8.92:63,9,0	./.	1/1:0,7:7:20.85:150,21,0	1/1:1,3:4:8.89:62,9,0	1/1:1,7:8:20.81:148,21,0	1/1:1,1:2:5.93:40,6,0
chr10	77553707	.	A	AC	1284.79	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.944;DP=753;FS=9.490;HRun=4;HaplotypeScore=81.3021;InbreedingCoeff=0.9937;MQ=82.87;MQ0=0;MQRankSum=1.605;QD=33.81;ReadPosRankSum=-4.023;VQSLOD=1.8932;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,132,1497	0/0:8,0:8:21.02:0,21,224	0/0:30,0:30:68.43:0,68,755	0/0:26,0:26:72.19:0,72,799	0/0:28,0:28:75.21:0,75,850	0/0:14,0:14:36.10:0,36,408	0/0:37,0:37:90.25:0,90,1020	1/1:4,34:38:99:1380,102,0	0/0:29,0:29:69.19:0,69,781	0/0:29,0:29:87.25:0,87,986	0/0:18,0:18:42.12:0,42,476	0/0:34,0:34:81.22:0,81,918	0/0:20,0:20:51.10:0,51,563	0/0:18,0:18:45.11:0,45,501	0/0:36,0:36:96.26:0,96,1078	0/0:20,0:20:57.16:0,57,646	0/0:39,0:39:99:0,105,1189	0/0:23,0:22:60.17:0,60,681	0/0:20,0:20:48.13:0,48,544	0/0:20,0:20:54.15:0,54,612	0/0:51,0:51:99:0,129,1463	0/0:16,0:16:45.13:0,45,510	0/0:18,0:18:48.14:0,48,544	0/0:51,0:51:99:0,129,1463	0/0:25,0:25:63.16:0,63,703	0/0:22,0:22:63.18:0,63,715	0/0:24,0:24:60.15:0,60,671	0/0:8,0:8:24.07:0,24,272
chr10	77627962	.	T	TTTC	11431.49	PASS	AB=0.609;AC=27;AF=0.482;AN=56;BaseQRankSum=1.551;DP=494;FS=6.577;HRun=0;HaplotypeScore=105.1038;InbreedingCoeff=0.9196;MQ=67.87;MQ0=0;MQRankSum=-6.253;QD=51.03;ReadPosRankSum=-1.005;VQSLOD=6.8304;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.26:0,78,1201	1/1:0,4:4:9.03:198,9,0	0/0:21,0:21:51.17:0,51,799	0/0:21,0:21:45.15:0,45,678	0/0:14,0:14:42.14:0,42,674	1/1:1,16:18:48.16:1036,48,0	1/1:3,26:30:74.92:1454,75,0	1/1:5,27:34:93.26:1843,93,0	0/0:20,0:20:51.14:0,51,774	1/1:0,17:17:51.18:1121,51,0	1/1:2,11:13:27.09:582,27,0	0/0:21,0:21:51.13:0,51,771	0/0:13,0:13:27.09:0,27,425	0/0:12,0:12:33.10:0,33,519	0/0:14,0:14:30.10:0,30,481	0/1:5,9:14:28.24:555,0,28	1/1:1,11:12:30.02:575,30,0	0/0:15,0:15:39.13:0,39,619	1/1:4,9:13:30.10:624,30,0	1/1:2,11:13:30.10:640,30,0	1/1:3,20:23:48.16:961,48,0	0/0:24,0:24:63.19:0,63,939	0/0:20,0:20:54.18:0,54,866	0/0:28,0:27:63.01:0,63,922	0/0:18,0:18:54.18:0,54,866	1/1:1,12:13:36.12:780,36,0	1/1:3,9:12:27.04:536,27,0	1/1:0,8:8:24.08:526,24,0
chr10	77627995	.	TAC	T	377.62	PASS	AB=0.944;AC=12;AF=0.316;AN=38;BaseQRankSum=-0.014;DP=501;FS=2.377;HRun=0;HaplotypeScore=132.1762;InbreedingCoeff=0.5251;MQ=56.23;MQ0=16;MQRankSum=2.589;QD=3.26;ReadPosRankSum=2.309;VQSLOD=2.8527;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:14.82:0,15,128	./.	./.	./.	0/0:12,0:12:3:0,3,26	./.	0/0:32,0:32:8.97:0,9,70	./.	1/1:9,0:13:5.34:23,5,0	0/0:17,0:17:17.76:0,18,134	0/0:12,0:12:2.97:0,3,20	1/1:12,7:20:11.76:96,12,0	1/1:6,8:13:15.40:161,15,0	1/1:11,0:10:8.72:52,9,0	0/0:17,0:17:6.01:0,6,67	0/1:16,0:14:16.06:16,0,36	0/0:13,0:12:2.97:0,3,20	0/0:18,0:17:9.97:0,10,78	./.	./.	./.	./.	0/1:14,2:16:3.99:13,0,4	1/1:16,8:25:17.71:157,18,0	0/0:9,0:9:6:0,6,58	0/0:17,0:16:17.72:0,18,131	0/0:14,0:14:11.82:0,12,77	0/0:10,0:10:2.96:0,3,19
chr10	77628699	.	GAA	G	9793.60	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=16.234;DP=643;FS=3.131;HRun=10;HaplotypeScore=119.8015;InbreedingCoeff=0.9584;MQ=77.03;MQ0=0;MQRankSum=-0.862;QD=26.91;ReadPosRankSum=2.022;VQSLOD=4.5614;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:38:93.78:0,94,1456	1/1:1,10:11:30.08:334,30,0	0/0:19,0:19:30.76:0,31,368	0/1:10,0:11:0.85:1,0,62	0/0:19,0:23:49.62:0,50,673	1/1:3,29:32:75.19:836,75,0	1/1:2,11:13:30.08:334,30,0	1/1:6,30:37:92.96:1006,93,0	0/0:15,0:15:39.13:0,39,618	1/1:6,33:39:99:1096,99,0	1/1:0,31:32:78.12:928,78,0	0/0:21,0:21:57.19:0,57,903	0/0:21,0:21:54.18:0,54,857	0/0:12,0:13:35.61:0,36,532	0/0:25,0:25:71.73:0,72,1102	1/1:3,23:26:63.16:702,63,0	1/1:2,18:20:45.11:502,45,0	0/0:17,0:17:45.15:0,45,710	1/1:4,19:23:57.10:614,57,0	1/1:0,39:39:99:1204,108,0	1/1:1,19:20:51.14:569,51,0	0/0:22,0:22:57.19:0,57,904	0/0:22,0:26:69.08:0,69,979	0/0:14,0:14:42.14:0,42,650	0/0:24,0:25:57.19:0,57,886	1/1:6,21:27:69.17:766,69,0	1/1:3,25:28:66.15:735,66,0	1/1:1,5:6:15.04:167,15,0
chr10	77633806	.	ACGT	A	6466.65	PASS	AB=0.619;AC=27;AF=0.482;AN=56;BaseQRankSum=18.452;DP=574;FS=29.166;HRun=0;HaplotypeScore=149.3770;InbreedingCoeff=0.9172;MQ=77.08;MQ0=0;MQRankSum=-16.004;QD=30.79;ReadPosRankSum=-0.957;VQSLOD=3.2651;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.18:0,60,1307	1/1:0,7:7:21.06:248,21,0	0/0:18,0:18:54.19:0,54,1304	0/0:16,0:16:48.14:0,48,1105	0/0:29,0:29:72.17:0,72,1765	1/1:3,13:16:47.80:537,48,0	1/1:1,16:17:36.18:528,36,0	1/1:7,26:33:82.70:983,83,0	0/0:36,0:36:99:0,105,2479	1/1:2,19:21:63.18:743,63,0	1/1:6,3:9:26.66:242,27,0	0/0:17,0:17:51.16:0,51,1206	0/0:18,0:18:54.19:0,54,1327	0/0:30,0:30:84.29:0,84,2049	0/0:29,0:29:87.30:0,87,2142	1/1:0,15:15:42.13:498,42,0	0/1:5,8:13:26.69:268,0,27	0/0:27,0:27:75.26:0,75,1236	1/1:1,11:12:33.09:387,33,0	1/1:3,6:9:22.58:236,23,0	1/1:3,5:8:14.98:217,15,0	0/0:36,0:36:99:0,102,2505	0/0:28,0:28:75.26:0,75,1775	0/0:30,0:30:81.28:0,81,1995	0/0:29,0:29:84.27:0,84,1981	1/1:4,18:22:57.21:662,57,0	1/1:2,23:25:72.05:835,72,0	1/1:2,1:3:8.99:84,9,0
chr10	77633810	.	AC	A	3802.66	PASS	AB=0.579;AC=27;AF=0.482;AN=56;BaseQRankSum=18.503;DP=547;FS=22.606;HRun=1;HaplotypeScore=131.5808;InbreedingCoeff=0.9007;MQ=78.57;MQ0=0;MQRankSum=-16.120;QD=19.70;ReadPosRankSum=0.457;VQSLOD=2.3487;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.18:0,54,862	1/1:1,7:8:23.86:176,24,0	0/0:19,0:19:54.15:0,54,785	0/0:16,0:16:48.16:0,48,754	0/0:29,0:29:78.22:0,78,1237	1/1:1,13:14:41.73:304,42,0	1/1:0,16:16:44.60:313,45,0	1/1:7,26:33:78.96:575,79,0	0/0:34,0:34:99:0,99,1576	1/1:1,19:20:59.56:432,60,0	1/1:3,3:6:14.90:123,15,0	0/0:16,0:16:45.15:0,45,719	0/0:18,0:18:54.17:0,54,836	0/0:28,0:28:78.27:0,78,1240	0/0:28,0:28:84.26:0,84,1296	1/1:0,15:15:41.73:302,42,0	0/1:3,8:11:17.98:156,0,18	0/0:27,0:27:78.25:0,78,1224	1/1:0,11:11:29.82:221,30,0	1/1:0,6:6:17.86:128,18,0	1/1:1,5:6:17.87:129,18,0	0/0:35,0:35:99:0,105,1634	0/0:28,0:28:78.26:0,78,1194	0/0:29,0:29:81.25:0,81,1269	0/0:28,0:28:81.27:0,81,1269	1/1:3,18:21:56.06:400,56,0	1/1:1,24:25:70.98:520,71,0	1/1:0,1:1:2.98:22,3,0
chr10	77633890	.	CAA	C	5993.08	PASS	AB=0.771;AC=32;AF=0.571;AN=56;BaseQRankSum=-3.548;DP=660;FS=1.562;HRun=14;HaplotypeScore=109.0741;InbreedingCoeff=0.7673;MQ=73.52;MQ0=2;MQRankSum=-0.498;QD=14.10;ReadPosRankSum=5.570;VQSLOD=4.0004;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:27:37.33:0,37,714	1/1:1,9:11:28.85:252,29,0	0/1:24,1:21:9.74:10,0,140	0/0:9,1:11:11.70:0,12,119	0/1:13,1:29:2.58:3,0,183	1/1:4,24:27:43.32:610,43,0	1/1:4,11:17:44.26:369,44,0	0/0:13,1:29:19.65:0,20,215	0/0:4,0:20:35.05:0,35,331	1/1:6,26:34:68.59:668,69,0	1/1:9,11:21:23.76:269,24,0	0/0:5,0:21:33.05:0,33,345	0/1:0,1:19:1.23:1,0,184	0/0:13,0:31:39:0,39,395	0/1:7,4:28:64.69:65,0,137	1/1:7,16:24:43.83:399,44,0	1/1:2,25:27:69.04:638,69,0	1/1:5,0:20:41.12:178,41,0	1/1:7,9:17:26.63:234,27,0	1/1:6,25:33:62.51:613,63,0	1/1:1,13:14:30.01:278,30,0	0/0:7,0:19:50.50:0,50,471	0/0:6,0:25:39.03:0,39,364	0/0:6,0:22:26.55:0,27,268	0/0:13,1:30:20.56:0,21,248	1/1:10,15:26:41.57:364,42,0	1/1:8,20:30:26.52:489,27,0	1/1:0,21:21:60.07:555,60,0
chr10	77635267	.	T	TGTAA	34953.87	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=14.932;DP=690;FS=1.071;HRun=0;HaplotypeScore=160.5612;InbreedingCoeff=0.9964;MQ=80.79;MQ0=0;MQRankSum=-17.130;QD=66.83;ReadPosRankSum=0.021;VQSLOD=6.0341;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.31:0,96,1782	1/1:1,14:15:39.13:1050,39,0	0/0:29,0:29:67.27:0,67,1283	0/0:24,0:24:63.22:0,63,1169	0/0:30,0:30:87.30:0,87,1648	1/1:3,22:25:69.19:1755,69,0	1/1:6,15:23:51.17:1285,51,0	1/1:12,13:27:72.20:1719,72,0	1/1:3,24:28:78.18:1978,78,0	1/1:9,24:34:93.28:2445,93,0	1/1:1,22:23:69.19:1728,69,0	1/1:2,20:22:66.18:1716,66,0	1/1:5,25:32:81.24:2101,81,0	1/1:5,14:19:54.19:1407,54,0	0/0:24,0:24:72.22:0,72,1296	1/1:5,17:22:60.17:1555,60,0	1/1:5,14:19:48.16:1266,48,0	1/1:2,9:12:27.09:660,27,0	1/1:10,18:28:84.24:2066,84,0	1/1:4,26:30:78.23:2019,78,0	1/1:9,12:21:36.04:805,36,0	1/1:6,26:33:87.17:2116,87,0	1/1:5,29:34:90.31:2399,90,0	1/1:3,8:12:18.02:423,18,0	0/0:27,0:27:78.25:0,78,1438	1/1:3,24:27:78.27:2056,78,0	1/1:8,22:30:78.27:2041,78,0	1/1:2,4:6:17.98:364,18,0
chr10	77639686	.	AT	A	6103.16	PASS	AB=0.846;AC=29;AF=0.518;AN=56;BaseQRankSum=12.793;DP=548;FS=2.361;HRun=10;HaplotypeScore=54.5731;InbreedingCoeff=0.9185;MQ=74.00;MQ0=0;MQRankSum=-2.725;QD=20.97;ReadPosRankSum=0.661;VQSLOD=5.8135;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,2:27:22.91:0,23,682	1/1:2,5:7:11.99:104,12,0	0/1:9,2:10:23.48:23,0,194	0/0:13,0:14:11.66:0,12,221	0/0:21,0:21:54.14:0,54,590	1/1:3,26:29:71.97:625,72,0	1/1:1,14:15:41.99:365,42,0	1/1:3,21:24:62.98:547,63,0	0/0:18,0:18:45.11:0,45,488	1/1:2,17:20:50.02:423,50,0	1/1:2,27:29:65.96:573,66,0	0/0:21,0:21:57.13:0,57,615	0/0:23,2:25:20.08:0,20,678	0/0:12,0:12:33.09:0,33,365	0/0:19,0:19:54.13:0,54,589	1/1:1,12:13:35.99:313,36,0	1/1:4,20:24:53.96:469,54,0	0/0:21,0:21:60.15:0,60,654	1/1:4,9:14:29.03:240,29,0	1/1:0,26:26:68.97:599,69,0	1/1:2,17:19:50.99:443,51,0	0/0:28,0:28:78.21:0,78,862	0/0:15,0:15:39.05:0,39,409	0/0:11,0:11:24.06:0,24,266	0/0:25,0:25:66.18:0,66,730	1/1:4,19:23:56.98:495,57,0	1/1:2,22:24:65.98:573,66,0	1/1:1,12:13:35.99:313,36,0
chr10	77640193	.	T	TA	907.40	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.193;DP=600;FS=4.527;HRun=7;HaplotypeScore=87.0000;InbreedingCoeff=0.7061;MQ=67.71;MQ0=0;MQRankSum=-0.243;QD=29.27;ReadPosRankSum=-5.708;VQSLOD=1.1857;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.07:0,87,817	0/0:12,0:12:27.04:0,27,261	0/0:5,0:5:4.22:0,4,24	0/0:5,1:6:3.66:0,4,40	0/0:28,0:28:78.10:0,78,743	0/0:18,0:18:44.72:0,45,410	0/0:28,0:28:75.10:0,75,718	1/1:2,29:31:87.21:1002,87,0	0/0:24,0:24:63.09:0,63,603	0/0:30,0:30:81.13:0,81,782	0/0:15,0:15:36.04:0,36,343	0/0:22,0:22:57.07:0,57,546	0/0:25,0:25:57.06:0,57,544	0/0:18,0:18:48.07:0,48,463	0/0:31,0:31:87.12:0,87,830	0/0:24,0:24:69.11:0,69,666	0/0:16,0:16:45.04:0,45,423	0/0:35,0:35:93.03:0,93,871	0/0:17,0:17:45.06:0,45,430	0/0:22,0:22:59.98:0,60,552	0/0:17,0:17:42.07:0,42,405	0/0:25,0:25:69.07:0,69,650	0/0:23,0:23:60.10:0,60,579	0/0:22,0:22:51.05:0,51,485	0/0:31,0:30:87.12:0,87,835	0/0:20,0:20:60.08:0,60,574	0/0:22,0:22:63.08:0,63,600	0/0:3,0:3:6.01:0,6,58
chr10	77640218	.	G	GT	3877.80	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.932;DP=649;FS=0.000;HRun=0;HaplotypeScore=81.3606;InbreedingCoeff=0.9995;MQ=78.10;MQ0=0;MQRankSum=-3.018;QD=25.51;ReadPosRankSum=2.957;VQSLOD=4.5044;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1516	0/0:12,0:12:36.12:0,36,503	0/0:12,0:12:35.78:0,36,437	0/0:16,0:17:25.46:0,25,386	0/0:29,0:29:84.26:0,84,1137	0/0:17,0:17:51.17:0,51,713	0/0:22,0:22:66.20:0,66,903	0/0:31,0:31:90.29:0,90,1242	1/1:4,13:18:40:442,40,0	0/0:30,0:30:90.29:0,90,1223	0/0:15,0:15:45.15:0,45,622	1/1:2,21:23:56.39:609,56,0	1/1:1,20:21:35.85:508,36,0	1/1:5,12:17:46.50:457,47,0	0/0:33,0:33:99:0,99,1368	0/0:24,0:24:72.23:0,72,987	0/0:20,0:20:60.17:0,60,803	0/0:41,0:41:99:0,102,689	0/0:19,0:19:57.17:0,57,767	0/0:26,0:26:78.25:0,78,1073	0/0:17,0:17:51.14:0,51,677	1/1:3,25:28:71.23:780,71,0	1/1:4,17:21:34.12:535,34,0	1/1:4,20:24:43.80:546,44,0	0/0:33,0:32:99:0,99,1382	0/0:26,0:26:78.26:0,78,1086	0/0:26,0:26:78.13:0,78,1063	0/0:10,0:10:30.10:0,30,419
chr10	77640220	.	C	CT	5329.25	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=8.730;DP=658;FS=0.338;HRun=8;HaplotypeScore=76.3865;InbreedingCoeff=0.9995;MQ=78.48;MQ0=0;MQRankSum=-3.629;QD=26.78;ReadPosRankSum=2.540;VQSLOD=5.4384;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1010	0/0:12,0:12:36.02:0,36,329	0/0:13,0:13:32.74:0,33,274	0/0:16,0:17:26.47:0,26,247	0/0:27,0:28:80.07:0,80,715	0/0:17,0:17:51.03:0,51,467	0/0:23,0:23:53.96:0,54,475	0/0:32,0:32:81.03:0,81,741	1/1:18,0:18:42.12:484,42,0	0/0:29,0:29:75.03:0,75,684	0/0:15,0:15:39.01:0,39,357	1/1:24,0:24:57.17:658,57,0	1/1:22,0:22:48.14:553,48,0	1/1:17,0:19:47.78:501,48,0	0/0:34,0:34:93.03:0,93,846	0/0:23,0:23:63.02:0,63,572	0/0:20,0:20:54.01:0,54,489	1/1:4,37:41:69.32:1046,69,0	0/0:17,0:19:43.79:0,44,374	0/0:26,0:26:78.03:0,78,709	0/0:18,0:18:50.99:0,51,457	1/1:28,0:28:75.22:866,75,0	1/1:22,0:22:29.31:569,29,0	1/1:25,0:25:59.94:651,60,0	0/0:35,0:34:95.63:0,96,857	0/0:25,0:26:65.05:0,65,578	0/0:25,0:25:75.04:0,75,686	0/0:10,0:10:30.02:0,30,274
chr10	77641257	.	T	TTAAAG	13542.04	PASS	AB=0.533;AC=29;AF=0.518;AN=56;BaseQRankSum=-1.393;DP=365;FS=55.028;HRun=0;HaplotypeScore=97.7698;InbreedingCoeff=0.8984;MQ=95.11;MQ0=0;MQRankSum=-14.868;QD=76.51;ReadPosRankSum=-2.136;VQSLOD=2.8757;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.29:0,84,1771	1/1:1,5:7:18.06:560,18,0	0/0:26,0:26:66.23:0,66,1358	0/0:14,0:14:36.05:0,36,669	0/0:11,0:11:33.11:0,33,703	1/1:3,5:9:21.07:615,21,0	1/1:5,7:12:36.12:1089,36,0	1/1:12,14:26:72.25:2123,72,0	0/0:5,0:5:6.02:0,6,128	1/1:0,11:11:30.10:938,30,0	1/1:2,9:11:27.09:755,27,0	0/0:11,0:11:30.10:0,30,640	0/0:17,0:17:51.18:0,51,1087	0/0:18,0:18:51.17:0,51,1055	0/0:12,0:12:36.11:0,36,729	1/1:0,4:5:12.04:375,12,0	1/1:3,1:4:9.03:281,9,0	1/1:2,5:7:18.06:520,18,0	1/1:5,9:16:39.11:1052,39,0	1/1:5,11:16:42.14:1283,42,0	1/1:3,9:13:27.09:801,27,0	0/0:13,0:13:39.13:0,39,818	0/0:13,0:13:39.13:0,39,832	0/0:6,0:6:18.06:0,18,384	0/0:14,0:14:39.13:0,39,811	0/1:2,14:16:15.78:1261,0,16	1/1:7,11:18:48.12:1369,48,0	1/1:1,5:6:18.06:521,18,0
chr10	77642279	.	C	CTT	4926.66	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=6.841;DP=532;FS=8.877;HRun=11;HaplotypeScore=92.6526;InbreedingCoeff=0.9729;MQ=85.34;MQ0=1;MQRankSum=-3.724;QD=18.18;ReadPosRankSum=-3.430;VQSLOD=2.7373;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:86.97:0,87,836	1/1:2,1:7:18:178,18,0	0/0:28,0:28:22.93:0,23,303	0/0:25,1:27:11.05:0,11,245	0/0:17,0:17:41.98:0,42,397	1/1:4,1:17:21.04:210,21,0	1/1:5,2:17:27.05:272,27,0	1/1:13,16:32:50.59:643,51,0	0/0:8,0:10:5.84:0,6,157	1/1:8,2:23:42.01:394,42,0	1/1:5,1:17:32.96:324,33,0	0/0:10,0:11:26.77:0,27,245	0/0:15,0:15:26.90:0,27,262	0/0:10,0:12:14.65:0,15,178	0/0:13,0:14:29.74:0,30,274	1/1:2,2:12:27.06:293,27,0	1/1:7,1:32:51.09:506,51,0	0/0:26,0:26:56.93:0,57,544	1/1:7,1:27:66.09:665,66,0	1/1:2,2:14:32.91:307,33,0	1/1:4,2:14:20.96:198,21,0	0/0:13,0:13:23.95:0,24,233	0/0:16,0:16:39.03:0,39,378	0/0:13,0:13:39.06:0,39,378	0/0:15,0:16:41.74:0,42,385	1/1:8,2:24:45.01:440,45,0	1/1:6,2:22:33.51:324,34,0	1/1:4,0:13:18.03:172,18,0
chr10	77643552	.	AGTGTGTGTGT	A	970.87	PASS	AB=0.817;AC=17;AF=0.370;AN=46;BaseQRankSum=4.920;DP=512;FS=18.693;HRun=0;HaplotypeScore=138.3791;InbreedingCoeff=0.5040;MQ=64.86;MQ0=12;MQRankSum=-4.595;QD=5.33;ReadPosRankSum=-0.707;VQSLOD=1.1605;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:30.10:0,30,1165	1/1:5,1:7:8.99:136,9,0	./.	./.	0/0:9,0:9:12.04:0,12,413	1/1:21,5:26:6.02:158,6,0	./.	0/0:30,0:29:3.94:0,4,94	0/0:13,0:13:17.47:0,17,626	./.	1/1:7,8:15:8.62:211,9,0	0/0:20,0:20:30.10:0,30,1041	0/0:9,0:10:12.02:0,12,385	0/0:16,0:16:21.05:0,21,558	0/0:16,0:16:18.06:0,18,708	1/1:11,4:15:3.01:88,3,0	0/1:23,1:31:65.85:66,0,163	0/1:18,0:20:4.39:4,0,102	1/1:20,1:19:6.01:116,6,0	0/1:13,5:18:86.19:168,0,86	./.	0/0:11,0:10:15.05:0,15,530	0/0:16,0:16:21.07:0,21,795	0/0:19,0:19:15.05:0,15,647	0/0:17,0:16:21.07:0,21,878	0/0:19,0:19:0:0,0,0	1/1:20,3:23:2.45:87,2,0	1/1:3,1:4:3.01:88,3,0
chr10	77644248	.	G	GT	4186.74	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=0.171;DP=567;FS=2.870;HRun=6;HaplotypeScore=58.9671;InbreedingCoeff=0.9920;MQ=72.99;MQ0=0;MQRankSum=-0.010;QD=30.78;ReadPosRankSum=2.085;VQSLOD=4.3768;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.20:0,90,917	0/0:10,0:10:27.06:0,27,275	0/0:11,0:11:22.89:0,23,178	0/0:9,0:9:16.49:0,16,130	0/0:20,0:20:54.12:0,54,551	0/0:21,0:21:53.76:0,54,550	0/0:20,0:20:54.12:0,54,551	0/0:40,0:40:89.96:0,90,893	1/1:0,17:17:48.15:604,48,0	0/0:31,0:31:78.18:0,78,796	0/0:16,0:16:39.08:0,39,398	1/1:2,28:30:69.22:868,69,0	1/1:2,17:19:48.15:602,48,0	1/1:1,22:23:63.20:793,63,0	0/0:19,0:19:54.11:0,54,544	0/0:23,0:23:57.12:0,57,581	0/0:27,0:27:69.15:0,69,704	1/1:3,10:13:27.09:340,27,0	0/0:27,0:27:72.14:0,72,725	0/0:22,0:22:54.12:0,54,550	0/0:12,0:12:36.05:0,36,358	1/1:3,5:8:12.04:151,12,0	1/1:1,14:15:36.12:453,36,0	1/1:0,11:11:30.10:377,30,0	0/0:20,0:20:54.12:0,54,551	0/0:23,0:23:69.16:0,69,704	0/0:33,0:33:93.20:0,93,948	0/0:14,0:14:42.10:0,42,428
chr10	77644778	.	T	TG	7718.80	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=0.591;DP=716;FS=1.689;HRun=6;HaplotypeScore=115.1267;InbreedingCoeff=0.9992;MQ=86.00;MQ0=0;MQRankSum=-1.500;QD=31.00;ReadPosRankSum=1.730;VQSLOD=3.9785;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.18:0,96,964	0/0:10,0:10:27.02:0,27,265	0/0:22,0:22:54.04:0,54,510	0/0:24,0:25:63.48:0,63,624	0/0:34,0:34:96.21:0,96,979	0/0:25,0:25:72.15:0,72,727	0/0:14,0:14:39.07:0,39,392	1/1:4,33:37:99:1235,102,0	1/1:3,20:23:63.16:775,63,0	0/0:22,0:22:57.12:0,57,582	0/0:20,0:20:48.11:0,48,490	1/1:2,34:36:90.29:1132,90,0	1/1:2,28:30:78.25:980,78,0	1/1:0,19:19:57.18:717,57,0	0/0:27,0:27:78.17:0,78,790	0/0:35,0:34:96.19:0,96,966	0/0:24,0:24:72.16:0,72,734	1/1:2,0:26:62.60:319,63,0	0/0:22,0:22:56.75:0,57,545	0/0:34,0:34:96.18:0,96,970	0/0:35,0:35:93.20:0,93,942	1/1:1,30:31:84.27:1055,84,0	1/1:2,23:25:66.21:827,66,0	1/1:3,19:22:54.17:679,54,0	0/0:22,0:22:63.10:0,63,629	0/0:24,0:24:69.16:0,69,704	0/0:29,0:29:78.18:0,78,796	0/0:7,0:7:21.05:0,21,214
chr10	77645291	.	CT	C	5724.12	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.238;DP=636;FS=1.947;HRun=2;HaplotypeScore=62.0915;InbreedingCoeff=0.9984;MQ=78.10;MQ0=0;MQRankSum=-1.415;QD=35.78;ReadPosRankSum=4.013;VQSLOD=5.4248;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1475	0/0:15,0:15:45.15:0,45,674	0/0:19,0:19:32.93:0,33,581	0/0:14,0:14:31.59:0,32,406	0/0:21,0:21:63.21:0,63,944	0/0:27,0:27:81.27:0,81,1214	0/0:20,0:20:57.19:0,57,854	0/0:27,0:27:78.24:0,78,1115	1/1:0,24:24:69.22:896,69,0	0/0:31,0:31:87.29:0,87,1304	0/0:24,0:24:72.24:0,72,1079	1/1:0,27:27:75.24:974,75,0	1/1:0,16:16:42.14:545,42,0	1/1:1,19:20:54.18:701,54,0	0/0:17,0:17:51.16:0,51,744	0/0:19,1:20:18.21:0,18,715	0/0:23,0:23:66.22:0,66,989	0/0:13,0:13:39.05:0,39,534	0/0:19,0:19:57.18:0,57,835	0/0:26,0:26:75.23:0,75,1081	0/0:28,0:28:84.27:0,84,1233	1/1:1,26:27:72.23:934,72,0	1/1:0,24:24:72.23:935,72,0	1/1:2,20:22:57.18:740,57,0	0/0:24,0:24:72.24:0,72,1078	0/0:30,0:30:90.30:0,90,1349	0/0:34,0:33:99:0,99,1440	0/0:11,0:11:33.11:0,33,494
chr10	77646490	.	C	CA	10191.86	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-7.834;DP=422;FS=11.709;HRun=6;HaplotypeScore=68.0849;InbreedingCoeff=0.9024;MQ=77.99;MQ0=0;MQRankSum=-8.209;QD=28.55;ReadPosRankSum=5.359;VQSLOD=4.5819;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:36.08:0,36,367	1/1:0,4:4:12.04:151,12,0	0/0:20,0:17:35.10:0,35,300	0/0:30,0:29:56.65:0,57,586	1/1:3,13:16:33.11:415,33,0	1/1:2,17:19:45.14:566,45,0	1/1:0,10:10:30.01:342,30,0	1/1:9,23:32:67.62:821,68,0	1/1:3,17:20:48.15:604,48,0	1/1:3,17:20:54.09:658,54,0	1/1:3,13:16:39.04:455,39,0	1/1:1,9:10:27.09:339,27,0	1/1:5,11:16:30.10:377,30,0	1/1:1,10:11:27.09:340,27,0	1/1:5,15:20:39.12:490,39,0	1/1:4,15:19:45.14:566,45,0	1/1:3,6:9:12.04:151,12,0	1/1:2,10:12:27.09:340,27,0	1/1:4,18:22:57.18:710,57,0	1/1:3,16:19:39.08:473,39,0	1/1:0,5:5:15.05:189,15,0	1/1:2,1:3:3.01:38,3,0	1/1:2,7:9:21.07:264,21,0	1/1:0,7:7:21.07:264,21,0	1/1:3,15:18:42.13:528,42,0	1/1:2,11:13:33.11:415,33,0	1/1:2,19:21:45.10:548,45,0	1/1:2,4:6:12.04:151,12,0
chr10	77646527	.	G	GAATGGTTAACATTAACAT	777.45	PASS	AB=0.750;AC=15;AF=0.938;AN=16;BaseQRankSum=-2.282;DP=23;FS=7.830;HRun=0;HaplotypeScore=29.1537;MQ=148.44;MQ0=0;MQRankSum=-1.734;QD=43.19;ReadPosRankSum=-0.456;VQSLOD=-0.1195;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	1/1:1,0:3:9.03:349,9,0	0/1:4,1:6:45.34:363,0,45	./.	./.	1/1:1,0:1:2.99:24,3,0	./.	./.	1/1:1,0:1:3:25,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:1,0:1:2.99:24,3,0	./.	./.	1/1:1,0:1:2.99:24,3,0	./.	1/1:1,0:1:2.99:24,3,0	1/1:2,0:2:2.98:21,3,0	./.
chr10	77646719	.	AGGAGGAGGAGGT	A	2497.84	PASS	AB=0.993;AC=23;AF=0.411;AN=56;BaseQRankSum=-9.505;DP=452;FS=10.619;HRun=0;HaplotypeScore=242.5489;InbreedingCoeff=-0.4413;MQ=36.25;MQ0=14;MQRankSum=-0.566;QD=6.77;ReadPosRankSum=-4.252;VQSLOD=0.4757;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:20:44.99:45,0,418	0/0:8,0:8:7.86:0,8,342	0/0:24,0:5:8.35:0,8,61	0/0:8,0:2:2.80:0,3,13	0/1:15,0:14:16.49:16,0,94	0/0:16,0:16:20.04:0,20,617	0/1:23,0:23:36.12:36,0,671	0/1:30,0:29:99:103,0,180	0/1:18,0:18:99:207,0,255	0/1:21,0:21:10.98:11,0,668	0/1:10,0:10:20.81:21,0,42	0/1:27,1:28:99:632,0,138	0/1:10,0:9:62.85:63,0,153	0/1:24,1:24:6:711,0,6	0/1:17,0:18:34.96:35,0,323	0/1:19,0:19:12.46:12,0,868	0/1:13,0:13:24.93:25,0,398	0/1:6,0:6:74.88:75,0,115	0/1:24,0:22:99:136,0,317	0/0:14,0:13:13.65:0,14,428	0/1:16,0:15:8.20:8,0,124	0/1:14,1:15:22.21:375,0,22	1/1:1,8:9:0.47:1,0,0	1/1:11,0:10:8.40:111,8,0	0/1:15,0:16:2.81:3,0,207	0/1:20,0:20:25.54:26,0,482	0/0:7,0:7:12.57:0,13,255	0/0:4,0:5:15.03:0,15,252
chr10	77646721	.	G	GAGGAGC	4110.32	PASS	AB=0.984;AC=31;AF=0.554;AN=56;BaseQRankSum=-2.669;DP=467;FS=5.497;HRun=0;HaplotypeScore=231.5370;InbreedingCoeff=-0.0958;MQ=36.85;MQ0=14;MQRankSum=0.057;QD=10.73;ReadPosRankSum=0.669;VQSLOD=2.1849;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:18.54:0,19,350	1/1:9,0:8:3.84:48,4,0	0/0:24,0:5:11.94:0,12,140	0/1:8,0:2:0:0,0,0	1/1:16,0:15:6.60:31,7,0	1/1:15,1:16:35.37:399,35,0	1/1:24,2:26:48.47:618,48,0	0/1:29,0:28:89.63:262,0,90	0/1:19,0:19:66.48:66,0,107	0/1:22,1:23:15.04:479,0,15	0/1:10,0:10:2.35:16,0,2	0/1:28,0:28:24.73:25,0,184	0/1:10,0:9:15.32:15,0,24	0/1:25,0:24:27.97:28,0,116	1/1:18,0:18:11.87:157,12,0	1/1:17,2:19:30.83:466,31,0	0/1:11,2:13:2:274,0,2	0/1:6,0:6:17.03:90,0,17	0/1:24,0:22:81.34:210,0,81	0/1:13,1:13:2.99:158,0,3	1/1:17,0:16:20.78:232,21,0	0/0:15,0:15:0.84:0,1,65	0/0:9,0:9:2.22:0,2,7	0/0:11,0:10:3.31:0,3,15	0/1:16,0:16:43.70:46,0,44	0/1:23,0:23:7.39:214,0,7	1/1:7,2:9:6.11:224,6,0	0/1:5,0:5:11.92:51,0,12
chr10	77646724	.	G	GAGC	2215.40	PASS	AB=0.984;AC=24;AF=0.444;AN=54;BaseQRankSum=-2.760;DP=483;FS=22.739;HRun=0;HaplotypeScore=213.1580;InbreedingCoeff=-0.6027;MQ=37.25;MQ0=14;MQRankSum=-3.747;QD=5.50;ReadPosRankSum=2.785;VQSLOD=1.2578;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:16.95:0,17,355	0/0:11,0:10:12.98:0,13,64	0/0:26,0:5:11.47:0,11,127	./.	0/1:16,0:15:12.35:12,0,14	0/1:16,0:16:48.50:142,0,49	0/1:25,0:25:99:196,0,135	0/1:30,0:29:49.26:229,0,49	0/1:19,0:19:34.87:85,0,35	0/1:24,0:24:99:119,0,160	0/1:10,0:10:11.04:11,0,20	0/1:28,0:28:87.10:136,0,87	0/1:11,0:10:0.29:41,0,0	0/1:25,0:24:25.03:221,0,25	0/1:19,0:19:61.94:87,0,62	0/1:19,0:19:21.80:178,0,22	0/1:12,1:13:55.45:103,0,55	0/1:5,3:8:1.66:169,0,2	0/1:24,0:22:92.54:166,0,93	0/1:15,0:14:54.81:81,0,55	0/1:18,0:17:26.86:27,0,56	0/1:17,0:17:32.20:105,0,32	0/0:9,0:9:0:0,0,0	1/1:11,0:10:5.74:42,6,0	0/1:17,0:17:34.63:35,0,76	0/1:24,0:24:90.27:90,0,171	0/1:9,0:9:56.90:71,0,57	0/1:5,0:5:16.78:17,0,41
chr10	77646728	.	AGGT	A	5554.92	PASS	AB=0.994;AC=47;AF=0.839;AN=56;BaseQRankSum=-4.901;DP=511;FS=11.103;HRun=0;HaplotypeScore=187.1454;InbreedingCoeff=-0.0210;MQ=42.76;MQ0=14;MQRankSum=0.773;QD=11.11;ReadPosRankSum=-5.463;VQSLOD=2.5644;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:26:63.85:216,0,64	1/1:11,0:10:0.13:64,0,0	0/1:30,0:7:9.70:10,0,51	0/0:11,0:3:4.09:0,4,16	1/1:15,0:14:8.64:47,9,0	1/1:19,0:19:19.29:231,19,0	0/1:26,0:26:36.18:203,0,36	1/1:30,0:29:60.14:469,60,0	1/1:15,6:21:28.69:444,29,0	0/1:23,0:24:23.43:281,0,23	1/1:12,0:12:17.50:98,17,0	1/1:21,6:27:63.68:581,64,0	1/1:12,0:11:17.77:135,18,0	1/1:19,7:25:56.87:514,57,0	1/1:19,0:19:8.40:162,8,0	0/1:19,0:19:24.50:139,0,25	0/1:14,0:14:23.49:109,0,23	1/1:8,0:8:3.93:125,4,0	1/1:27,0:25:23.22:297,23,0	1/1:15,0:14:14.54:114,15,0	1/1:21,0:20:14.66:176,15,0	1/1:12,4:16:30.81:285,31,0	1/1:9,0:9:1.55:4,2,0	1/1:8,3:10:9.69:75,10,0	1/1:16,5:21:45.33:374,45,0	1/1:24,0:24:17.84:296,18,0	1/1:9,0:9:0.17:86,0,0	0/1:6,0:6:6.47:22,0,6
chr10	77646959	.	A	AT	13833.80	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=5.492;DP=676;FS=0.430;HRun=9;HaplotypeScore=100.3413;InbreedingCoeff=0.8345;MQ=73.68;MQ0=0;MQRankSum=-3.349;QD=22.83;ReadPosRankSum=3.236;VQSLOD=4.9858;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,150,1283	1/1:1,11:12:30.03:317,30,0	0/1:20,0:19:2.93:3,0,193	0/0:18,0:18:26.38:0,26,201	1/1:6,9:15:13.42:331,13,0	1/1:1,15:16:39.11:431,39,0	1/1:4,24:28:60.16:664,60,0	1/1:10,21:32:36.90:590,37,0	1/1:3,26:29:46.16:737,46,0	1/1:2,16:18:51.09:540,51,0	1/1:2,20:22:47.82:433,48,0	1/1:5,29:34:69.30:792,69,0	1/1:6,26:32:51.89:782,52,0	1/1:5,22:28:31.15:571,31,0	1/1:4,22:26:66.18:730,66,0	1/1:4,18:22:22.07:472,22,0	1/1:3,38:41:99:1128,102,0	1/1:7,16:23:65.06:638,65,0	1/1:3,21:24:63.15:682,63,0	1/1:3,11:13:26.99:272,27,0	1/1:4,27:31:11.06:578,11,0	1/1:3,9:12:20.97:205,21,0	1/1:2,11:13:21.19:304,21,0	1/1:7,21:28:34.11:604,34,0	1/1:1,19:20:51.07:547,51,0	1/1:6,19:25:34.10:572,34,0	1/1:5,27:32:22.58:648,23,0	1/1:1,8:9:21.98:261,22,0
chr10	77648694	.	C	CACAT	24650.40	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-8.742;DP=942;FS=2.415;HRun=0;HaplotypeScore=140.6269;InbreedingCoeff=0.9554;MQ=54.22;MQ0=20;MQRankSum=-0.325;QD=32.78;ReadPosRankSum=6.435;VQSLOD=4.6403;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,168,2919	1/1:3,11:14:24.97:618,25,0	0/0:65,0:36:89.07:0,89,1356	0/0:66,0:31:59.35:0,59,837	1/1:2,24:26:39.13:1052,39,0	1/1:7,16:23:6.18:472,6,0	1/1:4,30:35:20.27:875,20,0	1/1:5,26:30:60.31:1539,60,0	1/1:2,26:28:27.08:728,27,0	1/1:21,29:49:99:2146,114,0	1/1:4,25:29:30.10:810,30,0	1/1:6,25:31:42.41:1087,42,0	1/1:6,22:28:48.85:1175,49,0	1/1:4,21:26:30.09:800,30,0	1/1:6,24:30:24.01:569,24,0	1/1:14,12:25:20.93:454,21,0	1/1:3,42:45:73.87:1962,74,0	1/1:12,0:12:19.69:154,20,0	1/1:6,14:21:51.05:994,51,0	1/1:6,16:22:24.08:648,24,0	1/1:7,71:77:72.08:1918,72,0	1/1:6,22:28:33.11:890,33,0	1/1:6,21:27:28.34:731,28,0	1/1:5,44:47:51.18:1376,51,0	1/1:6,29:35:24.06:647,24,0	1/1:4,26:30:66.23:1634,66,0	1/1:2,11:14:32.60:724,33,0	1/1:0,9:9:24.08:647,24,0
chr10	77648754	.	G	GACAC	3896.65	PASS	AB=0.833;AC=31;AF=0.574;AN=54;BaseQRankSum=3.603;DP=790;FS=2.851;HRun=0;HaplotypeScore=316.6301;InbreedingCoeff=-0.0688;MQ=41.22;MQ0=18;MQRankSum=-3.327;QD=6.64;ReadPosRankSum=0.845;VQSLOD=2.1489;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:96.25:0,96,1547	0/1:15,3:18:60.52:61,0,73	0/0:31,0:12:14.56:0,15,126	0/0:34,0:18:34.13:0,34,426	0/0:24,8:31:5.49:0,5,70	0/1:14,5:19:30.23:49,0,30	0/1:23,6:30:48.35:51,0,48	0/1:50,0:44:17.04:17,0,484	1/1:27,0:30:5.98:116,6,0	0/1:33,12:41:99:1465,0,279	1/1:18,13:31:4.12:23,4,0	1/1:24,0:31:2.21:74,2,0	0/1:20,0:22:39.76:44,0,40	0/1:13,0:17:0.45:0,0,4	1/1:19,22:42:20.62:118,21,0	1/1:23,8:31:13.65:135,14,0	1/1:18,5:25:18.80:341,19,0	0/1:7,4:13:99:232,0,155	0/1:20,2:18:99:208,0,327	0/1:23,6:28:31.24:31,0,54	./.	0/0:25,0:27:3.63:0,4,10	1/1:16,1:20:1.04:19,1,0	1/1:24,0:29:8.24:71,8,0	1/1:17,7:24:10.61:56,11,0	0/1:32,5:36:99:463,0,703	0/1:5,5:10:85.28:206,0,85	0/1:9,1:9:4.03:115,0,4
chr10	77648758	.	CACAG	C	1187.42	PASS	AB=0.914;AC=25;AF=0.463;AN=54;BaseQRankSum=1.543;DP=782;FS=0.000;HRun=0;HaplotypeScore=321.0671;InbreedingCoeff=-0.2827;MQ=41.88;MQ0=17;MQRankSum=-3.279;QD=2.10;ReadPosRankSum=-4.683;VQSLOD=0.8790;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:99:0,102,2320	0/1:14,4:18:8.46:8,0,187	0/0:33,0:13:12.17:0,12,257	0/0:36,0:20:35.40:0,35,766	0/0:26,3:28:2.59:0,3,142	0/1:15,4:19:47.48:47,0,72	0/1:23,7:30:59.55:60,0,67	0/1:47,0:41:1.14:1,0,1446	0/1:28,0:28:10.20:10,0,153	0/1:34,11:40:99:576,0,891	1/1:31,2:33:7.51:30,8,0	0/0:27,0:27:4.27:0,4,176	0/1:22,0:22:3.14:3,0,279	0/0:17,0:17:4.60:0,5,66	1/1:40,3:43:1.04:24,1,0	0/1:29,2:31:14.03:14,0,66	0/1:16,7:23:99:152,0,136	0/1:13,0:13:8.91:9,0,330	0/1:23,2:19:60.59:61,0,701	0/1:25,5:29:19.26:19,0,123	./.	0/1:25,0:25:0.59:1,0,1	0/1:20,0:20:5.05:16,0,5	1/1:28,0:28:9.19:72,9,0	1/1:22,4:26:0.96:19,1,0	0/1:37,2:37:90.26:90,0,1567	0/1:8,2:10:75.43:75,0,196	0/1:10,0:9:46.88:47,0,113
chr10	77648760	.	CAG	C	1309.05	PASS	AB=0.895;AC=24;AF=0.444;AN=54;BaseQRankSum=1.318;DP=782;FS=3.997;HRun=0;HaplotypeScore=316.0181;InbreedingCoeff=-0.2458;MQ=41.64;MQ0=17;MQRankSum=-1.846;QD=2.45;ReadPosRankSum=-4.799;VQSLOD=1.2967;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,1:41:99:0,102,1741	0/1:18,0:18:11.88:12,0,117	0/0:31,0:12:11.27:0,11,200	0/0:38,0:23:37.20:0,37,652	0/0:29,0:28:3.68:0,4,107	0/1:20,0:20:12.90:13,0,48	0/1:33,0:33:35.50:90,0,36	0/1:36,11:41:99:556,0,942	0/1:16,11:27:75.97:76,0,100	0/1:46,0:41:99:124,0,730	1/1:32,0:32:5.09:23,5,0	0/1:15,11:26:29.24:29,0,120	0/1:13,9:22:99:141,0,178	0/1:10,7:17:30.09:30,0,50	0/1:43,0:43:2.51:19,0,3	0/1:32,0:32:19.52:20,0,27	0/1:21,0:21:70.05:70,0,109	0/0:13,0:13:4.89:0,5,254	0/0:27,0:21:22.46:0,22,682	0/1:30,1:30:18.61:19,0,96	./.	1/1:9,16:25:7.47:74,7,0	0/1:12,8:20:5:16,0,5	1/1:19,9:28:9.04:72,9,0	1/1:26,0:26:3.80:23,4,0	0/0:39,0:37:33.01:0,33,1228	0/1:10,0:10:18.71:19,0,127	0/1:10,0:9:46.95:47,0,93
chr10	77648766	.	C	CACAGACAT	3198.22	PASS	AB=0.916;AC=32;AF=0.571;AN=56;BaseQRankSum=4.936;DP=753;FS=16.289;HRun=0;HaplotypeScore=351.8842;InbreedingCoeff=0.0753;MQ=37.88;MQ0=12;MQRankSum=-5.630;QD=5.57;ReadPosRankSum=-0.687;VQSLOD=0.7298;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:93.13:0,93,1826	0/1:16,3:19:7.41:28,0,7	0/0:26,0:11:19.02:0,19,253	0/0:33,0:21:18.33:0,18,533	1/1:24,4:27:2.43:25,2,0	1/1:21,1:22:4.34:16,4,0	0/0:32,0:32:6.35:0,6,38	0/1:45,0:39:99:323,0,123	0/1:23,3:26:6.43:209,0,6	0/1:44,1:40:42.85:399,0,43	0/1:31,2:33:1.08:2,0,1	1/1:18,7:25:7.50:287,8,0	0/1:17,2:19:14.92:142,0,15	1/1:12,4:16:8.65:75,9,0	1/1:32,11:44:5.34:23,5,0	1/1:28,5:33:9.74:150,10,0	0/1:14,4:18:11.49:231,0,11	0/1:11,0:11:14:76,0,14	1/1:30,1:26:21.62:387,22,0	1/1:28,5:32:2.09:16,2,0	0/1:27,0:25:0:0,0,0	0/0:23,2:25:1.39:0,1,21	0/1:13,4:17:0.15:1,0,0	0/0:19,3:23:0:0,0,1	1/1:23,5:28:1.94:8,2,0	0/1:34,3:35:74.84:584,0,75	0/1:10,2:12:38.25:220,0,38	1/1:4,1:4:8.84:151,9,0
chr10	77648800	.	C	CAGAGAG	7982.88	PASS	AB=0.956;AC=32;AF=0.571;AN=56;BaseQRankSum=3.482;DP=532;FS=6.787;HRun=0;HaplotypeScore=275.5839;InbreedingCoeff=0.4705;MQ=46.65;MQ0=21;MQRankSum=-8.340;QD=25.26;ReadPosRankSum=4.057;VQSLOD=3.6741;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:31:71.99:0,72,1587	1/1:10,9:19:0.54:451,1,0	0/0:26,0:20:42.84:0,43,960	0/0:39,0:35:92.89:0,93,1694	1/1:12,7:20:0.73:20,1,0	1/1:6,9:16:8.77:427,9,0	1/1:7,11:19:21.07:593,21,0	1/1:12,0:10:8.97:76,9,0	0/0:12,0:11:0.42:0,0,1	1/1:17,10:22:23.41:1379,23,0	0/0:11,9:22:1.25:0,1,3	0/0:13,0:12:5.20:0,5,22	0/1:9,0:9:3.95:68,0,4	0/1:11,0:10:3.88:20,0,4	0/0:17,10:28:5.29:0,5,14	1/1:12,20:32:10.48:498,10,0	0/1:11,2:11:11.49:278,0,11	1/1:3,0:5:8.68:130,9,0	1/1:15,4:16:8.02:656,8,0	1/1:21,10:31:4.48:194,4,0	0/0:11,1:12:1.23:0,1,3	1/1:10,0:10:0.58:2,1,0	0/0:6,0:6:1.82:0,2,5	0/1:11,0:10:0:0,0,0	0/0:7,14:23:1.55:0,2,4	1/1:13,15:29:68.40:2157,68,0	1/1:6,10:12:21.07:744,21,0	1/1:6,2:9:8.42:290,8,0
chr10	77648802	.	GAC	G	965.44	PASS	AB=0.868;AC=22;AF=0.393;AN=56;BaseQRankSum=2.419;DP=533;FS=9.331;HRun=0;HaplotypeScore=275.0727;InbreedingCoeff=-0.1169;MQ=46.35;MQ0=26;MQRankSum=-6.687;QD=2.78;ReadPosRankSum=-1.056;VQSLOD=0.4196;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:31:72.23:0,72,1248	0/1:14,5:19:54.25:54,0,74	0/0:25,0:20:57.12:0,57,831	0/0:37,0:33:93.07:0,93,1421	0/1:15,7:21:0.03:0,0,0	0/1:13,3:16:65.67:68,0,66	0/1:17,2:19:65.52:66,0,78	1/1:8,0:6:3:28,3,0	0/1:12,0:11:0.25:0,0,0	0/1:26,4:23:99:160,0,381	0/1:19,5:23:0:0,0,0	0/0:12,0:10:2.97:0,3,25	0/1:11,0:11:10.81:11,0,16	0/0:12,0:10:1.89:0,2,10	0/0:21,6:27:3.05:0,3,8	0/1:28,4:32:60.01:60,0,87	0/1:10,3:10:12.97:13,0,143	1/1:4,1:5:8.06:61,8,0	0/1:16,6:17:99:158,0,210	0/1:23,9:29:17.97:113,0,18	0/0:11,1:11:2.99:0,3,24	1/1:11,0:11:0.08:1,0,0	0/1:6,0:6:0.04:0,0,0	0/0:11,0:10:2.86:0,3,22	0/1:20,4:23:0:0,0,0	0/1:23,6:29:99:253,0,309	0/0:16,0:12:19.42:0,19,130	0/1:11,1:11:53.91:54,0,107
chr10	77648883	.	AGAGAG	A	67.50	PASS	AB=0.928;AC=6;AF=0.107;AN=56;BaseQRankSum=6.074;DP=566;FS=2.827;HRun=0;HaplotypeScore=169.3834;InbreedingCoeff=-0.1261;MQ=51.04;MQ0=46;MQRankSum=-6.259;QD=0.68;ReadPosRankSum=-2.984;VQSLOD=2.1955;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:30:57.18:0,57,738	0/1:5,3:8:48.27:48,0,52	0/0:12,0:8:24.07:0,24,293	0/0:18,0:13:35.92:0,36,389	0/0:28,0:26:54.82:0,55,249	0/0:18,0:15:8.76:0,9,106	0/0:24,0:17:21.88:0,22,105	0/0:38,0:35:74.18:0,74,1107	0/0:21,0:20:46.39:0,46,682	0/1:23,2:23:13.94:14,0,256	0/0:15,1:15:30.26:0,30,149	0/0:20,0:17:9.56:0,10,274	0/0:30,0:29:58.84:0,59,849	0/0:22,0:21:49.09:0,49,635	0/1:27,0:24:4.07:4,0,61	0/1:24,0:23:36.56:37,0,115	0/0:12,0:8:22.37:0,22,107	0/0:9,0:8:19.37:0,19,88	0/0:17,0:11:24.02:0,24,120	0/0:20,1:18:5.27:0,5,98	0/0:9,0:7:14.38:0,14,135	0/0:25,0:24:48.38:0,48,602	0/0:22,0:22:38.88:0,39,494	0/0:19,0:13:17.69:0,18,225	0/0:31,0:29:29.25:0,29,177	0/0:18,1:17:10.28:0,10,186	0/1:10,1:10:61.38:61,0,83	0/1:5,0:4:21.58:22,0,29
chr10	77649933	.	G	GT	11835.60	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.274;DP=669;FS=2.679;HRun=7;HaplotypeScore=120.7661;InbreedingCoeff=0.9483;MQ=65.14;MQ0=3;MQRankSum=-1.633;QD=19.60;ReadPosRankSum=4.263;VQSLOD=3.6219;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.07:0,63,595	1/1:2,8:10:18.06:217,18,0	0/0:19,0:16:10.42:0,10,265	0/0:22,0:19:34.07:0,34,266	1/1:4,3:28:54.50:289,54,0	1/1:2,21:23:51.16:616,51,0	1/1:4,13:17:36.11:435,36,0	1/1:7,1:31:63.39:321,63,0	1/1:4,1:25:43.13:219,43,0	1/1:1,30:31:87.25:1037,87,0	1/1:4,26:30:75.19:890,75,0	1/1:2,0:21:48.68:248,49,0	1/1:4,0:23:27.26:143,27,0	1/1:3,0:21:37.38:190,37,0	1/1:2,0:30:57.30:292,57,0	1/1:3,21:24:54.17:652,54,0	1/1:1,20:21:54.17:652,54,0	1/1:1,0:19:37.43:195,37,0	1/1:8,18:25:57.11:656,57,0	1/1:3,35:38:73.29:1148,73,0	1/1:0,14:14:39.12:471,39,0	1/1:0,0:28:60.49:317,60,0	1/1:2,0:17:36.32:181,36,0	1/1:0,0:21:48.88:249,49,0	1/1:0,0:28:63.09:319,63,0	1/1:7,33:40:99:1182,99,0	1/1:1,25:26:60.18:724,60,0	1/1:3,7:10:6.60:192,7,0
chr10	77650257	.	A	AAAACC	19640.42	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=5.435;DP=795;FS=1.260;HRun=0;HaplotypeScore=261.2708;InbreedingCoeff=0.9682;MQ=52.80;MQ0=3;MQRankSum=-8.026;QD=29.05;ReadPosRankSum=-0.245;VQSLOD=4.1560;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:87.26:0,87,1511	1/1:17,0:18:38.06:549,38,0	0/0:42,0:30:18.02:0,18,311	0/0:32,0:21:17.97:0,18,256	1/1:34,0:34:54.09:779,54,0	1/1:22,0:29:59.60:1004,60,0	1/1:27,0:27:38.47:718,38,0	1/1:15,4:21:30.08:614,30,0	1/1:11,11:22:36.12:957,36,0	1/1:14,1:31:51.07:783,51,0	1/1:18,0:32:39.13:765,39,0	1/1:10,15:25:29.44:836,29,0	1/1:18,12:30:35.65:938,36,0	1/1:14,14:29:45.12:1188,45,0	1/1:32,0:32:60.03:737,60,0	1/1:22,0:28:63.15:1116,63,0	1/1:28,0:32:40.70:647,41,0	1/1:25,0:25:13.42:534,13,0	1/1:23,0:20:13.31:242,13,0	1/1:20,0:26:48.71:714,49,0	1/1:25,0:25:18:301,18,0	1/1:11,19:31:63.22:1752,63,0	1/1:9,10:19:24.08:668,24,0	1/1:11,10:21:30.10:842,30,0	1/1:30,0:29:47.77:462,48,0	1/1:25,0:44:71.89:1249,72,0	1/1:26,0:30:53.86:941,54,0	1/1:3,0:7:15.05:305,15,0
chr10	77650284	.	AT	A	1824.59	PASS	AB=0.881;AC=15;AF=0.268;AN=56;BaseQRankSum=5.403;DP=813;FS=4.516;HRun=1;HaplotypeScore=226.8196;InbreedingCoeff=-0.3662;MQ=67.99;MQ0=1;MQRankSum=-3.858;QD=4.11;ReadPosRankSum=-1.275;VQSLOD=-0.3281;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,2207	0/1:12,4:16:99:142,0,407	0/0:37,1:30:74.96:0,75,1123	0/0:47,1:43:99:0,104,1553	0/1:37,5:42:82.60:83,0,1177	0/1:25,5:30:99:257,0,472	0/1:23,3:26:92.42:92,0,630	0/0:24,0:23:58.38:0,58,998	0/0:18,0:18:51.08:0,51,625	0/1:41,0:40:70.85:71,0,1341	0/0:31,0:31:72.19:0,72,1041	0/0:32,0:32:78.06:0,78,973	0/0:23,0:23:66.10:0,66,836	0/0:32,0:32:87.13:0,87,1053	0/1:25,9:34:99:386,0,634	0/1:29,3:32:78.33:78,0,884	0/1:27,2:29:53.89:54,0,648	0/1:19,3:22:71.99:72,0,649	0/1:17,2:19:27.43:27,0,669	0/1:27,4:31:76.78:77,0,993	0/1:27,4:31:26.11:26,0,738	0/0:32,0:32:78.92:0,79,869	0/0:20,0:20:54:0,54,642	0/0:17,0:17:45.03:0,45,510	0/1:16,12:27:99:402,0,277	0/1:36,0:36:86.17:86,0,1011	0/1:23,4:27:99:130,0,537	0/0:6,0:6:18.02:0,18,217
chr10	77650319	.	T	TGAC	6632.39	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=11.942;DP=873;FS=1.460;HRun=0;HaplotypeScore=258.7438;InbreedingCoeff=-0.2369;MQ=63.37;MQ0=5;MQRankSum=-2.529;QD=8.94;ReadPosRankSum=3.917;VQSLOD=4.1229;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:53:99:0,159,2322	1/1:13,0:13:4.19:91,4,0	0/0:35,0:26:57.11:0,57,754	0/0:41,0:38:84.71:0,85,1000	1/1:6,25:31:27.09:569,27,0	1/1:35,0:35:22.03:266,22,0	0/1:32,0:32:99:173,0,156	0/1:22,0:22:65.81:66,0,83	0/1:30,0:30:24.68:205,0,25	0/1:38,0:38:99:137,0,464	0/1:25,0:25:98.40:98,0,160	0/1:45,0:45:28.87:311,0,29	1/1:27,0:27:30.57:234,31,0	1/1:43,0:43:20.12:319,20,0	1/1:3,27:30:60.21:1289,60,0	0/1:36,0:36:25.68:207,0,26	0/1:36,0:36:21.52:397,0,22	1/1:29,0:29:31.23:802,31,0	0/1:23,0:23:67.95:68,0,302	0/1:33,0:33:99:182,0,206	0/1:39,0:39:72.19:257,0,72	0/1:34,0:34:24.09:24,0,59	0/1:16,0:16:5.54:6,0,62	0/1:19,0:19:17.35:17,0,39	1/1:4,14:18:18:396,18,0	0/1:36,0:36:99:165,0,287	0/1:37,0:37:76.85:232,0,77	0/1:15,0:15:5.38:121,0,5
chr10	77650322	.	C	CGAT	13523.41	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=10.447;DP=891;FS=3.470;HRun=0;HaplotypeScore=239.3951;InbreedingCoeff=0.2232;MQ=61.13;MQ0=6;MQRankSum=-2.569;QD=17.79;ReadPosRankSum=3.270;VQSLOD=4.4099;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:54:99:0,138,1937	1/1:13,0:13:21.07:284,21,0	0/0:34,0:23:41.98:0,42,449	0/0:42,0:38:52.99:0,53,615	1/1:29,0:29:27.07:400,27,0	1/1:34,0:34:49.24:834,49,0	0/1:34,0:34:23.70:587,0,24	1/1:26,0:26:8.05:365,8,0	1/1:30,0:31:39.02:495,39,0	0/1:38,0:37:61.24:635,0,61	0/1:27,0:27:38.79:366,0,39	1/1:42,0:45:57.13:728,57,0	1/1:27,0:28:38.92:470,39,0	1/1:43,0:44:51.04:646,51,0	1/1:34,0:34:60.20:860,60,0	1/1:38,0:38:36.50:698,37,0	1/1:37,0:37:53.24:980,53,0	1/1:3,26:29:66.23:1352,66,0	0/1:23,0:23:31.69:322,0,32	0/1:32,0:32:34.70:551,0,35	0/1:41,0:41:4.69:679,0,5	1/1:31,0:33:8.59:100,9,0	1/1:17,0:17:11.82:116,12,0	1/1:17,0:19:2.88:43,3,0	0/1:17,0:17:2.94:239,0,3	0/1:36,0:36:19.37:711,0,19	1/1:37,0:37:6.25:653,6,0	1/1:18,0:18:32.53:411,33,0
chr10	77650325	.	T	TGAC	5431.19	PASS	AB=0.979;AC=33;AF=0.589;AN=56;BaseQRankSum=13.350;DP=896;FS=0.674;HRun=0;HaplotypeScore=263.7021;InbreedingCoeff=-0.2323;MQ=58.32;MQ0=6;MQRankSum=-2.266;QD=7.08;ReadPosRankSum=10.754;VQSLOD=2.5112;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:54:99:0,156,2455	1/1:12,0:12:4.17:91,4,0	0/0:32,0:21:51.16:0,51,788	0/0:41,0:37:79.88:0,80,1194	1/1:28,0:28:2.73:156,3,0	1/1:34,0:34:21.23:265,21,0	0/1:34,0:34:99:175,0,160	0/1:26,0:26:89.19:89,0,127	0/1:29,2:31:1.79:343,0,2	0/1:39,0:38:99:130,0,476	0/1:26,0:26:99:112,0,163	0/1:38,6:44:7.66:390,0,8	1/1:29,1:30:32.72:308,33,0	1/1:40,5:45:19.34:445,19,0	1/1:32,0:32:15.93:350,16,0	0/1:39,0:39:28.13:205,0,28	0/1:38,0:38:5.46:401,0,5	1/1:30,0:30:31.22:795,31,0	0/1:25,0:25:61.82:62,0,369	0/1:32,0:32:99:182,0,199	0/1:41,0:41:74.66:256,0,75	0/1:33,0:34:26.12:26,0,57	0/1:16,1:17:5.06:5,0,62	0/1:17,2:19:17.25:17,0,39	0/1:16,0:16:26.17:92,0,26	0/1:39,0:39:99:173,0,285	0/1:38,0:38:72:229,0,72	1/1:18,0:18:8.62:132,9,0
chr10	77650331	.	T	TGAC	8457.04	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=12.851;DP=914;FS=8.356;HRun=0;HaplotypeScore=260.6649;InbreedingCoeff=0.0280;MQ=54.83;MQ0=8;MQRankSum=-2.102;QD=10.91;ReadPosRankSum=12.015;VQSLOD=2.3224;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:58:99:0,168,2545	1/1:11,0:11:12.24:107,12,0	0/0:40,0:24:60.10:0,60,798	0/0:40,0:36:87.54:0,88,1167	0/1:30,0:30:52.20:148,0,52	1/1:34,0:34:21.26:267,21,0	0/1:32,0:32:99:183,0,116	1/1:21,3:24:39.86:748,40,0	1/1:20,10:30:38.96:662,39,0	0/1:41,0:40:99:151,0,436	0/1:26,0:26:99:101,0,163	1/1:25,19:44:68.92:1109,69,0	1/1:15,18:33:47.75:711,48,0	1/1:20,26:46:54.12:928,54,0	1/1:32,0:32:14.95:369,15,0	0/1:39,0:39:27.98:204,0,28	1/1:35,0:35:11.44:411,11,0	1/1:31,0:31:28.22:800,28,0	0/1:26,0:26:70.29:70,0,350	0/1:31,0:31:99:181,0,144	0/1:40,0:40:75.15:259,0,75	1/1:23,13:36:8.61:150,9,0	1/1:10,6:16:14.91:232,15,0	1/1:16,6:22:2.87:59,3,0	0/1:15,0:15:48.28:86,0,48	0/1:39,0:39:99:158,0,320	0/1:40,0:40:57.98:234,0,58	1/1:22,0:22:7.56:130,8,0
chr10	77650334	.	T	TGAC	17301.97	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=-2.139;DP=926;FS=3.833;HRun=0;HaplotypeScore=228.0014;InbreedingCoeff=0.6507;MQ=53.52;MQ0=9;MQRankSum=0.314;QD=22.04;ReadPosRankSum=5.838;VQSLOD=4.5838;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:58:99:0,150,2002	1/1:3,9:12:21.07:435,21,0	0/0:42,0:24:39:0,39,434	0/0:40,0:36:56.19:0,56,674	0/1:29,0:29:47.52:153,0,48	1/1:4,32:38:66.23:1367,66,0	1/1:5,27:33:51.17:1029,51,0	1/1:27,0:26:31.24:285,31,0	1/1:22,0:29:32.72:402,33,0	1/1:28,12:39:78.02:1286,78,0	1/1:21,5:26:36.07:674,36,0	1/1:35,0:44:62.33:651,62,0	1/1:27,0:34:42.87:420,43,0	1/1:35,0:45:48.04:611,48,0	1/1:33,0:33:20.45:357,20,0	1/1:7,31:38:60.09:1166,60,0	1/1:3,36:40:72.24:1457,72,0	1/1:32,0:32:29.10:795,29,0	1/1:5,20:26:56.09:687,56,0	1/1:8,24:32:45.15:931,45,0	1/1:8,33:41:54.19:1117,54,0	1/1:31,0:33:11.58:124,12,0	1/1:14,0:14:2.83:19,3,0	1/1:20,0:21:9.31:87,9,0	0/1:16,0:16:41.78:88,0,42	1/1:22,16:38:86.64:1427,87,0	1/1:5,32:39:51.18:1054,51,0	1/1:4,20:25:36.10:681,36,0
chr10	77651378	.	A	AT	16119.71	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-10.010;DP=606;FS=5.621;HRun=7;HaplotypeScore=53.5578;InbreedingCoeff=0.9976;MQ=79.76;MQ0=0;MQRankSum=-3.530;QD=30.36;ReadPosRankSum=2.829;VQSLOD=5.3830;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,944	1/1:1,7:8:21.06:254,21,0	0/0:18,0:18:35.17:0,35,352	0/0:20,0:20:35.54:0,36,326	1/1:2,19:21:57.13:670,57,0	1/1:1,32:33:96.29:1160,96,0	1/1:1,12:13:30.09:362,30,0	1/1:2,19:21:57.15:665,57,0	1/1:2,20:22:28.20:623,28,0	1/1:3,19:22:57.17:679,57,0	1/1:1,24:25:69.08:798,69,0	1/1:3,23:26:63.19:761,63,0	1/1:2,13:15:33.10:398,33,0	1/1:0,25:25:63.13:743,63,0	1/1:2,22:24:60.18:725,60,0	1/1:0,21:21:54.17:652,54,0	1/1:4,20:24:48.15:580,48,0	1/1:4,18:22:36.90:599,37,0	1/1:5,11:16:33.10:399,33,0	1/1:3,30:33:90.28:1087,90,0	1/1:3,14:17:33.10:399,33,0	1/1:1,17:18:45.14:544,45,0	1/1:1,17:18:45.14:544,45,0	1/1:4,17:21:48.15:580,48,0	1/1:0,16:16:48.15:580,48,0	1/1:0,29:29:87.27:1051,87,0	1/1:1,24:25:66.20:797,66,0	1/1:1,15:16:39.12:471,39,0
chr10	77651580	.	AC	A	6569.86	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.657;DP=612;FS=1.933;HRun=1;HaplotypeScore=94.5679;InbreedingCoeff=0.9960;MQ=71.63;MQ0=2;MQRankSum=-0.226;QD=39.34;ReadPosRankSum=-0.554;VQSLOD=4.8854;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.14:0,54,809	0/0:8,0:8:24.08:0,24,380	0/0:17,0:13:15.81:0,16,228	0/0:21,0:13:19.22:0,19,228	0/0:21,0:21:63.21:0,63,1003	0/0:31,0:31:93.30:0,93,1456	0/0:14,0:14:42.14:0,42,667	1/1:0,35:35:99:1451,105,0	1/1:0,20:20:60.20:839,60,0	0/0:27,0:27:78.27:0,78,1237	0/0:26,0:26:78.24:0,78,1201	1/1:0,29:29:81.27:1133,81,0	1/1:0,23:23:66.22:923,66,0	1/1:0,19:19:48.16:671,48,0	0/0:27,0:27:81.28:0,81,1290	0/0:36,1:37:69.39:0,69,1648	0/0:27,0:27:78.24:0,78,1220	0/0:23,0:23:67.78:0,68,1048	0/0:20,0:20:57.17:0,57,887	0/0:29,0:29:87.30:0,87,1378	0/0:13,0:13:39.11:0,39,599	1/1:0,11:11:33.11:462,33,0	1/1:0,20:20:54.18:755,54,0	1/1:1,9:10:24.08:336,24,0	0/0:16,0:16:48.16:0,48,767	0/0:27,0:27:78.27:0,78,1247	0/0:30,0:30:90.29:0,90,1410	0/0:13,0:13:39.08:0,39,572
chr10	77652508	.	AGTGTGTGTGTGTGTGT	A	1536.21	PASS	AB=0.867;AC=13;AF=0.232;AN=56;BaseQRankSum=4.491;DP=407;FS=24.791;HRun=0;HaplotypeScore=173.7871;InbreedingCoeff=0.5716;MQ=62.95;MQ0=8;MQRankSum=-4.737;QD=17.07;ReadPosRankSum=0.160;VQSLOD=0.8726;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:27.07:0,27,1390	0/0:2,0:2:3.01:0,3,100	0/0:13,0:10:3.01:0,3,43	0/0:17,0:11:3.01:0,3,42	0/0:10,0:11:11.78:0,12,436	0/0:19,0:19:9.03:0,9,445	0/0:21,0:22:21.07:0,21,1205	0/0:23,0:21:15.05:0,15,609	1/1:7,2:9:6.02:262,6,0	0/0:7,0:7:10.28:0,10,529	0/0:9,0:9:15.05:0,15,782	1/1:6,2:8:3.01:131,3,0	1/1:7,6:13:12.04:524,12,0	1/1:7,5:12:6.02:186,6,0	0/0:6,0:9:9.03:0,9,435	0/0:11,0:16:15.05:0,15,605	0/0:21,0:25:35.14:0,35,1602	0/0:20,0:20:30.10:0,30,2126	0/0:18,0:17:13.29:0,13,587	0/0:7,0:7:6.02:0,6,269	0/0:33,0:30:27.08:0,27,1514	1/1:9,4:13:3.01:62,3,0	1/1:5,4:9:5.98:96,6,0	0/1:22,4:26:61.08:430,0,61	0/0:8,0:8:3.01:0,3,172	0/0:16,0:16:30.06:0,30,1255	0/0:9,0:10:18.06:0,18,1012	0/0:6,0:7:12.04:0,12,643
chr10	77652611	.	CTTCTT	C	667.53	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=0.883;DP=363;FS=0.942;HRun=0;HaplotypeScore=86.6180;InbreedingCoeff=0.8898;MQ=87.75;MQ0=3;MQRankSum=-1.219;QD=20.86;ReadPosRankSum=2.522;VQSLOD=2.9224;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:20:44.87:0,45,1048	0/0:2,0:2:6:0,6,52	0/0:21,0:14:24.64:0,25,236	0/0:25,0:18:29.95:0,30,322	1/1:0,6:8:14.85:197,15,0	0/0:18,0:18:54.09:0,54,1118	0/0:16,0:17:44.97:0,45,767	0/0:22,0:21:48.10:0,48,873	0/0:9,0:9:26.92:0,27,641	0/0:11,0:11:26.90:0,27,425	0/0:7,0:7:20.98:0,21,381	0/0:12,0:12:33.02:0,33,761	0/0:15,0:15:36.05:0,36,869	0/0:10,0:10:27.04:0,27,648	1/1:0,15:16:23.82:474,24,0	0/0:7,0:7:18.06:0,18,449	0/0:18,0:18:17.93:0,18,662	0/0:11,0:10:21.06:0,21,448	0/0:17,0:17:40.16:0,40,627	0/0:7,0:7:14.99:0,15,227	0/0:15,0:14:23.17:0,23,328	0/0:6,0:6:14.92:0,15,201	0/0:8,0:8:21.06:0,21,470	0/0:21,0:21:51.12:0,51,1252	1/1:2,6:8:6.02:128,6,0	0/0:11,0:11:33.09:0,33,609	0/0:13,0:13:30:0,30,563	0/0:7,0:6:15.03:0,15,324
chr10	77652614	.	C	CTT	3062.91	PASS	AB=0.851;AC=31;AF=0.554;AN=56;BaseQRankSum=0.664;DP=402;FS=5.918;HRun=14;HaplotypeScore=82.5554;InbreedingCoeff=0.6207;MQ=74.34;MQ0=9;MQRankSum=-2.268;QD=12.25;ReadPosRankSum=-4.908;VQSLOD=1.4317;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:22,1:23:12.80:13,0,197	1/1:2,0:3:5.80:42,6,0	0/0:21,0:12:1.31:0,1,5	0/0:21,0:12:5.11:0,5,48	0/0:9,0:9:8:0,8,38	1/1:8,10:20:49.47:518,49,0	1/1:11,6:18:38.18:374,38,0	1/1:19,0:19:27.24:155,27,0	0/0:11,0:12:13.98:0,14,150	1/1:5,11:18:20.99:216,21,0	1/1:0,2:8:20.96:210,21,0	0/0:13,0:12:23.78:0,24,189	0/0:13,0:14:17.80:0,18,181	0/0:13,0:13:16.86:0,17,176	0/0:16,0:16:15.55:0,16,81	1/1:0,7:10:16.90:164,17,0	0/1:9,5:17:0.85:181,0,1	1/1:5,4:11:23.34:219,23,0	1/1:17,4:19:41.29:321,41,0	1/1:5,1:7:11.98:122,12,0	1/1:8,3:11:10.33:89,10,0	0/1:8,0:8:4.06:4,0,19	0/1:10,0:10:2.35:2,0,103	0/0:23,0:24:46.28:0,46,333	0/0:6,0:6:5.60:0,6,26	1/1:5,11:17:14.17:306,14,0	0/1:6,10:16:6.77:167,0,7	1/1:1,4:5:12.04:157,12,0
chr10	77654921	.	CA	C	6937.03	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=7.888;DP=704;FS=11.281;HRun=1;HaplotypeScore=108.2830;InbreedingCoeff=0.9993;MQ=85.63;MQ0=0;MQRankSum=-0.939;QD=36.13;ReadPosRankSum=4.949;VQSLOD=3.7741;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,2168	0/0:15,1:16:48.14:0,48,740	0/0:32,0:32:92.79:0,93,1307	0/0:15,0:15:36.11:0,36,534	0/0:28,0:28:84.20:0,84,1238	0/0:18,0:18:54.17:0,54,838	0/0:25,0:25:75.26:0,75,1198	0/0:24,0:24:63.16:0,63,920	1/1:0,26:26:66.22:919,66,0	0/0:34,0:34:99:0,102,1550	0/0:21,0:21:63.20:0,63,981	1/1:0,20:20:57.19:794,57,0	1/1:0,30:30:78.26:1076,78,0	1/1:0,22:22:60.20:836,60,0	0/0:17,0:17:51.13:0,51,743	0/0:27,0:27:78.27:0,78,1241	0/0:26,0:26:78.24:0,78,1216	1/1:0,20:20:51.17:710,51,0	0/0:24,0:24:72.23:0,72,1126	0/0:26,0:26:75.22:0,75,1128	0/0:30,0:30:87.11:0,87,1329	1/1:1,24:25:60.20:835,60,0	1/1:0,20:20:48.16:668,48,0	1/1:0,29:29:81.10:1099,81,0	0/0:21,0:21:63.18:0,63,957	0/0:30,0:30:90.30:0,90,1415	0/0:45,0:45:99:0,135,2060	0/0:7,0:7:21.07:0,21,335
chr10	77655029	.	TTCTG	T	1225.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.326;DP=696;FS=3.806;HRun=0;HaplotypeScore=110.3129;InbreedingCoeff=0.9993;MQ=86.85;MQ0=1;MQRankSum=-5.919;QD=43.78;ReadPosRankSum=-3.648;VQSLOD=3.0978;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,3273	0/0:14,0:14:36.12:0,36,963	0/0:34,0:34:90.47:0,90,2244	0/0:23,0:23:69.24:0,69,1724	0/0:26,0:26:75.24:0,75,1966	0/0:29,0:29:84.29:0,84,2226	0/0:25,0:25:66.21:0,66,1703	1/1:4,24:27:72.23:1321,72,0	0/0:22,0:22:63.22:0,63,1670	0/0:29,0:29:81.28:0,81,2154	0/0:21,0:21:57.20:0,57,1506	0/0:20,0:20:54.19:0,54,1446	0/0:26,0:26:78.25:0,78,1940	0/0:19,0:19:54.64:0,55,1358	0/0:32,0:32:90.31:0,90,2410	0/0:22,0:22:66.23:0,66,1782	0/0:23,0:23:69.22:0,69,1804	0/0:24,0:24:69.22:0,69,1793	0/0:26,0:26:72.25:0,72,1934	0/0:19,0:19:57.20:0,57,1531	0/0:55,0:55:99:0,166,4268	0/0:22,0:22:66.23:0,66,1782	0/0:16,0:16:48.16:0,48,1285	0/0:15,0:15:45.14:0,45,1124	0/0:25,0:25:72.23:0,72,1880	0/0:20,0:19:60.21:0,60,1584	0/0:27,0:27:78.27:0,78,1955	0/0:11,0:11:30.08:0,30,751
chr10	77655207	.	TG	T	333.33	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.256;DP=785;FS=2.166;HRun=5;HaplotypeScore=74.8076;InbreedingCoeff=0.9221;MQ=71.03;MQ0=0;MQRankSum=-0.949;QD=22.22;ReadPosRankSum=0.973;VQSLOD=2.7739;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,129,1747	0/0:13,0:13:39.13:0,39,528	0/0:27,0:27:66.16:0,66,837	0/0:16,0:16:38.06:0,38,495	0/0:28,0:28:81.27:0,81,1107	0/0:23,0:23:69.21:0,69,913	0/0:29,0:29:78.24:0,78,1049	0/0:40,0:40:99:0,108,1464	0/0:22,0:22:66.22:0,66,903	0/0:34,0:34:88.17:0,88,1192	0/0:18,0:18:54.18:0,54,737	0/0:32,0:32:87.28:0,87,1174	0/0:34,0:34:99:0,102,1378	0/0:26,0:26:78.26:0,78,1056	0/0:42,0:42:99:0,120,1641	0/0:27,0:27:81.26:0,81,1091	0/0:24,2:26:7.15:0,7,841	1/1:1,14:15:39.07:428,39,0	0/0:26,0:26:69.22:0,69,929	0/0:35,0:35:93.30:0,93,1255	0/0:40,0:40:99:0,111,1517	0/0:31,0:31:90.23:0,90,1199	0/0:31,0:31:81.26:0,81,1106	0/0:30,0:30:78.24:0,78,1050	0/0:25,0:25:66.21:0,66,887	0/0:25,0:25:69.21:0,69,913	0/0:26,0:26:69.21:0,69,926	0/0:17,0:17:51.17:0,51,697
chr10	77656187	.	G	GT	2030.39	PASS	AB=0.885;AC=19;AF=0.339;AN=56;BaseQRankSum=-6.958;DP=698;FS=2.804;HRun=13;HaplotypeScore=90.1451;InbreedingCoeff=0.3955;MQ=73.34;MQ0=1;MQRankSum=1.429;QD=6.25;ReadPosRankSum=1.055;VQSLOD=2.8180;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:28,6:37:89.03:89,0,387	0/0:8,0:8:11.82:0,12,82	0/1:41,0:27:4.56:5,0,113	0/1:31,1:24:51.38:51,0,59	0/0:3,0:18:30.54:0,31,89	0/0:24,2:28:18.83:0,19,390	0/0:20,1:29:26.87:0,27,286	0/0:14,0:40:42.38:0,42,128	0/1:6,14:22:5.63:251,0,6	0/1:17,2:21:18.90:19,0,160	0/0:18,0:20:48.66:0,49,320	1/1:9,8:18:9.33:288,9,0	1/1:9,15:24:0.01:243,0,0	1/1:1,11:12:24.03:223,24,0	0/0:3,0:24:30.54:0,31,89	0/0:28,0:29:52.23:0,52,461	0/0:29,1:32:55.58:0,56,502	0/0:5,0:17:3.43:0,3,23	0/0:32,0:34:55.10:0,55,424	0/0:25,1:29:27.60:0,28,328	0/1:14,0:14:14.69:15,0,170	1/1:6,24:33:20.35:434,20,0	1/1:8,14:24:14.89:286,15,0	1/1:2,14:17:32.87:293,33,0	0/0:1,0:18:24.44:0,24,71	0/0:27,0:28:57.83:0,58,387	0/1:25,5:29:18.19:18,0,323	0/0:17,1:19:18.83:0,19,265
chr10	77656352	.	C	CGT	2823.27	PASS	AB=0.846;AC=38;AF=0.679;AN=56;BaseQRankSum=-5.328;DP=664;FS=0.765;HRun=0;HaplotypeScore=109.5926;InbreedingCoeff=-0.0815;MQ=66.43;MQ0=9;MQRankSum=-0.289;QD=4.83;ReadPosRankSum=-1.804;VQSLOD=2.7962;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:26:3.76:0,4,101	1/1:11,3:14:9.03:134,9,0	1/1:25,0:15:0.47:1,0,0	0/1:33,0:23:0:1,0,0	1/1:11,0:29:2.89:26,3,0	0/1:22,0:24:45.78:48,0,46	1/1:17,6:22:12.04:179,12,0	1/1:26,0:26:5.11:25,5,0	0/1:14,10:25:14.57:205,0,15	0/1:17,9:27:11.10:205,0,11	0/1:17,0:18:32.87:33,0,52	1/1:13,5:18:6.89:72,7,0	1/1:18,5:23:11.53:143,12,0	0/1:17,4:21:50.34:119,0,50	1/1:17,0:22:3:26,3,0	0/1:23,1:23:34.76:58,0,35	0/1:22,11:34:99:235,0,101	1/1:14,10:23:14.25:184,14,0	0/0:11,0:12:5.85:0,6,47	0/1:17,6:25:20.59:122,0,21	0/1:24,7:31:49.88:118,0,50	0/1:17,4:21:74.20:74,0,82	1/1:14,4:18:24.07:326,24,0	0/0:27,0:42:41.48:0,41,205	1/1:14,0:14:4.81:28,5,0	1/1:16,6:24:18.93:247,19,0	0/1:17,6:24:21.87:82,0,22	1/1:6,8:13:4.32:291,4,0
chr10	77656353	.	G	GTGTA	322.05	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=4.083;DP=667;FS=0.762;HRun=0;HaplotypeScore=144.9470;InbreedingCoeff=0.6082;MQ=66.08;MQ0=9;MQRankSum=0.684;QD=3.32;ReadPosRankSum=0.347;VQSLOD=2.7085;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:52.15:0,52,517	0/0:14,0:14:25.35:0,25,200	0/0:25,0:15:25.38:0,25,317	0/0:32,0:23:46.87:0,47,448	1/1:27,0:27:2.99:61,3,0	0/0:25,0:24:33.17:0,33,431	0/0:23,0:22:37.77:0,38,295	0/0:25,0:25:36.97:0,37,470	0/0:24,0:24:35.29:0,35,301	0/0:29,0:29:25.52:0,26,500	0/0:17,0:17:39.17:0,39,366	0/1:16,0:16:8.79:9,0,188	0/0:23,0:23:49.16:0,49,371	0/0:21,0:21:43.37:0,43,410	1/1:22,0:22:29.97:265,30,0	0/0:26,0:25:50.33:0,50,448	0/0:33,0:33:64.87:0,65,623	0/0:25,0:23:29.93:0,30,190	0/0:11,0:11:32.94:0,33,320	0/0:26,0:26:39.86:0,40,347	0/0:32,0:31:56.27:0,56,524	0/0:22,0:22:36.90:0,37,384	0/1:18,0:18:35.75:36,0,209	0/0:42,0:42:78.08:0,78,1016	1/1:2,11:14:5.23:87,5,0	0/0:26,0:26:27.91:0,28,329	0/0:25,0:25:32.92:0,33,287	0/0:14,0:13:13.06:0,13,86
chr10	77657474	.	A	ATGTG	2228.21	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.178;DP=882;FS=4.613;HRun=0;HaplotypeScore=153.0433;InbreedingCoeff=0.9940;MQ=59.77;MQ0=12;MQRankSum=-1.861;QD=17.83;ReadPosRankSum=0.970;VQSLOD=3.2792;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:89.57:0,90,1363	0/0:20,0:20:54.18:0,54,900	0/0:40,0:31:65.44:0,65,1107	0/0:42,0:21:56.83:0,57,765	1/1:5,0:35:59.23:266,59,0	0/0:37,0:37:87.26:0,87,1398	0/0:28,0:27:59.35:0,59,861	1/1:10,28:38:84.09:1732,84,0	0/0:33,0:33:78.21:0,78,1231	0/0:45,0:44:99:0,103,1895	0/0:15,0:15:39.12:0,39,639	0/0:36,0:37:99:0,102,1603	0/0:24,0:24:60.14:0,60,933	0/0:21,0:21:57.18:0,57,942	1/1:5,0:29:44.77:202,45,0	0/0:31,0:30:84.25:0,84,1345	0/0:14,0:14:19.79:0,20,454	0/0:35,0:35:82.42:0,82,1320	0/0:30,0:27:60.15:0,60,901	0/0:32,0:32:81.26:0,81,1349	0/0:56,0:56:99:0,123,2041	0/0:31,0:31:84.27:0,84,1389	0/0:34,0:34:90.31:0,90,1529	0/0:46,0:46:99:0,117,1913	1/1:5,0:23:41.97:189,42,0	0/0:29,0:29:72.24:0,72,1198	0/0:30,0:31:75.25:0,75,1238	0/0:6,0:6:15.03:0,15,230
chr10	77658605	.	TC	T	4087.03	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.927;DP=702;FS=2.307;HRun=1;HaplotypeScore=96.0470;InbreedingCoeff=0.9995;MQ=89.80;MQ0=0;MQRankSum=-2.837;QD=39.68;ReadPosRankSum=-0.801;VQSLOD=3.5755;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,2124	0/0:9,0:9:27.09:0,27,431	0/0:31,0:31:93.32:0,93,1477	0/0:29,0:29:75.96:0,76,1238	1/1:0,21:21:60.20:832,60,0	0/0:14,0:14:36.12:0,36,575	0/0:19,0:19:57.19:0,57,901	1/1:0,34:34:96.31:1325,96,0	0/0:28,0:28:84.29:0,84,1338	0/0:24,0:24:69.19:0,69,1017	0/0:10,0:10:30.10:0,30,467	0/0:34,0:34:99:0,99,1535	0/0:32,0:32:96.31:0,96,1509	0/0:34,0:34:99:0,102,1629	1/1:0,23:23:66.22:923,66,0	0/0:27,0:27:81.28:0,81,1289	0/0:31,0:31:93.28:0,93,1424	0/0:23,0:23:69.24:0,69,1096	0/0:23,0:23:66.20:0,66,1010	0/0:22,0:22:60.19:0,60,932	0/0:34,0:34:99:0,99,1578	0/0:12,0:12:36.11:0,36,550	0/0:20,0:20:57.18:0,57,887	0/0:25,0:25:75.26:0,75,1195	1/1:0,25:25:72.24:1007,72,0	0/0:24,0:24:72.23:0,72,1128	0/0:37,0:37:99:0,111,1741	0/0:12,0:12:36.12:0,36,575
chr10	77659442	.	C	CT	9261.05	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-16.289;DP=717;FS=1.267;HRun=7;HaplotypeScore=66.9370;InbreedingCoeff=0.9993;MQ=76.10;MQ0=0;MQRankSum=-1.919;QD=30.77;ReadPosRankSum=1.986;VQSLOD=5.2541;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,162,1559	0/0:14,0:14:42.06:0,42,400	0/0:34,0:32:35.67:0,36,565	0/0:16,0:14:38.60:0,39,340	1/1:5,26:31:78.19:924,78,0	0/0:26,0:26:63.09:0,63,608	0/0:23,0:23:63.09:0,63,602	1/1:6,18:24:54.15:637,54,0	1/1:2,28:30:78.24:942,78,0	0/0:24,0:24:66.09:0,66,632	0/0:30,0:30:87.10:0,87,823	1/1:2,20:22:54.17:652,54,0	1/1:0,28:28:81.25:978,81,0	1/1:1,21:22:63.19:756,63,0	1/1:2,25:27:72.22:869,72,0	0/0:22,0:22:60.10:0,60,579	0/0:28,0:28:84.13:0,84,810	1/1:4,21:25:60.18:724,60,0	0/0:15,0:15:39.05:0,39,371	0/0:27,0:27:81.13:0,81,782	0/0:31,0:31:84.13:0,84,811	1/1:2,22:24:66.16:781,66,0	1/1:2,21:23:57:688,57,0	1/1:0,22:22:57.17:688,57,0	1/1:4,19:23:28.27:622,28,0	0/0:32,0:32:87.13:0,87,840	0/0:29,0:29:81.12:0,81,776	0/0:7,0:7:21.03:0,21,203
chr10	77660324	.	GTA	G	1602.99	PASS	AB=0.995;AC=15;AF=0.268;AN=56;BaseQRankSum=5.735;DP=828;FS=0.000;HRun=0;HaplotypeScore=149.1803;InbreedingCoeff=0.3507;MQ=62.16;MQ0=5;MQRankSum=-1.741;QD=5.31;ReadPosRankSum=-3.009;VQSLOD=2.7456;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,111,1927	0/0:10,0:10:30.03:0,30,419	0/1:21,0:8:1.38:1,0,79	0/0:20,0:5:5.97:0,6,56	1/1:11,16:27:3.88:181,4,0	0/0:29,0:29:84.24:0,84,1421	0/0:35,0:35:86.93:0,87,1300	1/1:3,18:21:54.04:544,54,0	0/0:38,0:38:11.44:0,11,69	0/0:41,0:42:99:0,108,1835	0/0:23,0:23:66.15:0,66,1040	0/1:43,0:43:53.62:99,0,54	0/1:47,0:47:47.87:64,0,48	0/1:32,0:32:22.59:23,0,47	1/1:19,16:35:58.58:516,59,0	0/0:33,0:33:90.24:0,90,1460	0/0:19,0:19:54.01:0,54,737	0/1:14,0:13:6.29:6,0,216	0/0:19,0:18:27.27:0,27,569	0/0:31,0:31:84.19:0,84,1332	0/0:65,0:65:99:0,172,2908	0/0:28,0:28:19.86:0,20,98	0/1:18,0:18:13.60:14,0,32	0/1:27,1:28:44.44:44,0,51	1/1:1,15:16:30.04:281,30,0	0/0:43,0:42:99:0,123,1840	0/0:33,0:33:92.53:0,93,1374	0/0:7,0:7:18.06:0,18,324
chr10	77660327	.	T	TAC	6396.52	PASS	AB=0.836;AC=15;AF=0.268;AN=56;BaseQRankSum=11.319;DP=847;FS=0.337;HRun=0;HaplotypeScore=138.5197;InbreedingCoeff=0.5879;MQ=62.10;MQ0=5;MQRankSum=0.448;QD=20.11;ReadPosRankSum=5.166;VQSLOD=5.1485;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,156,2148	0/0:10,0:10:30.09:0,30,429	0/1:21,0:8:1.81:2,0,82	0/0:19,0:4:6.02:0,6,77	0/1:30,0:30:6.12:6,0,42	0/0:29,0:29:84.29:0,84,1278	0/0:32,0:32:88.16:0,88,1293	0/1:20,0:20:20.17:29,0,20	1/1:2,37:39:79.47:1298,79,0	0/0:41,0:41:99:0,123,1776	0/0:25,0:25:72.22:0,72,1052	1/1:8,34:45:59.13:1187,59,0	1/1:9,38:48:69.28:1383,69,0	1/1:8,26:35:45.13:973,45,0	0/0:39,0:39:16.20:0,16,153	0/0:31,0:31:90.29:0,90,1345	0/0:19,0:19:54.13:0,54,762	0/0:15,0:14:32.65:0,33,240	0/0:18,0:17:48.06:0,48,657	0/0:32,0:32:87.28:0,87,1298	0/0:67,0:67:99:0,174,2642	0/1:8,21:29:13.19:694,0,13	0/1:7,14:21:0.91:254,0,1	1/1:8,22:30:2.79:571,3,0	0/0:17,0:17:30.98:0,31,154	0/0:44,0:43:99:0,126,1871	0/0:31,0:31:93.28:0,93,1346	0/0:6,0:6:18.06:0,18,275
chr10	77660329	.	T	TAC	6700.54	PASS	AB=0.974;AC=16;AF=0.296;AN=54;BaseQRankSum=10.064;DP=841;FS=1.959;HRun=0;HaplotypeScore=136.3362;InbreedingCoeff=0.8513;MQ=60.10;MQ0=6;MQRankSum=2.698;QD=24.02;ReadPosRankSum=3.774;VQSLOD=5.6532;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:56:99:0,106,1281	0/0:10,0:10:24.06:0,24,276	0/1:18,0:5:6.05:6,0,6	./.	0/0:32,0:32:11.89:0,12,48	0/0:31,0:31:78.20:0,78,907	0/0:31,1:32:24.16:0,24,728	0/0:18,0:18:10.99:0,11,40	1/1:39,0:39:87.28:1357,87,0	0/0:42,0:41:99:0,103,1176	0/0:25,0:25:60.12:0,60,680	1/1:45,0:45:66.27:1244,66,0	1/1:49,0:49:76.09:1408,76,0	1/1:36,0:36:54.87:1009,55,0	0/0:37,0:37:39.03:0,39,183	0/0:29,0:29:75.23:0,75,898	0/1:17,1:18:2.89:3,0,429	0/0:16,0:15:17.13:0,17,179	0/0:17,0:16:37.64:0,38,373	0/0:32,0:32:81.18:0,81,910	0/0:63,2:65:69.08:0,69,1669	1/1:28,0:28:23.47:751,23,0	1/1:19,0:19:9.45:316,9,0	1/1:27,0:27:14.11:607,14,0	0/0:18,0:18:32.89:0,33,150	0/0:44,0:43:90.26:0,90,1059	0/0:32,0:33:81.03:0,81,906	0/0:6,0:6:18.06:0,18,216
chr10	77660343	.	CACACAT	C	2356.47	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=4.469;DP=895;FS=1.078;HRun=0;HaplotypeScore=219.8381;InbreedingCoeff=0.8593;MQ=59.81;MQ0=7;MQRankSum=-7.602;QD=17.33;ReadPosRankSum=-3.885;VQSLOD=2.6599;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,113,3851	0/0:10,0:10:30.09:0,30,937	0/1:15,0:5:3.65:4,0,9	0/0:25,0:4:1.78:0,2,32	1/1:18,18:36:14.41:274,14,0	0/0:30,0:30:84.25:0,84,2641	0/0:30,0:30:87.18:0,87,2232	1/1:20,0:20:28:307,28,0	0/0:41,0:41:99:0,108,2665	0/0:47,0:46:99:0,130,3777	0/0:26,0:26:72.16:0,72,2075	0/0:49,0:49:99:0,114,2783	0/0:50,0:50:99:0,111,2769	0/0:38,0:39:96.26:0,96,2365	1/1:19,21:40:42.14:921,42,0	0/0:31,0:31:90.27:0,90,2792	0/0:19,0:19:57.10:0,57,1563	0/0:15,0:14:42.04:0,42,1348	0/0:16,0:15:30.43:0,30,894	0/0:37,0:37:99:0,111,3042	0/0:78,0:78:99:0,213,5853	0/0:31,0:31:69.09:0,69,1691	0/0:22,0:22:38.65:0,39,927	0/0:27,0:27:57.20:0,57,1593	1/1:25,0:25:60.58:1009,61,0	0/0:42,0:41:99:0,114,3405	0/0:36,0:36:99:0,101,2813	0/0:8,0:8:24.08:0,24,773
chr10	77660345	.	CACAT	C	1886.26	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=5.467;DP=923;FS=2.902;HRun=0;HaplotypeScore=196.4850;InbreedingCoeff=0.8004;MQ=60.31;MQ0=7;MQRankSum=-5.129;QD=11.43;ReadPosRankSum=-4.344;VQSLOD=2.6858;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,119,2944	0/0:10,0:10:30.09:0,30,718	0/1:14,0:5:3.65:4,0,9	0/1:27,0:7:12.60:44,0,13	1/1:22,13:35:15.05:218,15,0	0/0:31,0:31:87.21:0,87,2023	0/0:31,0:31:90.15:0,90,1738	1/1:22,0:22:34.74:332,35,0	0/0:41,0:41:99:0,108,1889	0/0:49,0:48:99:0,136,2977	0/0:27,0:27:75.15:0,75,1612	0/0:49,0:49:99:0,114,2011	0/0:51,0:51:99:0,114,1980	0/0:39,0:39:96.24:0,96,1682	1/1:25,15:40:42.14:592,42,0	0/0:34,0:34:99:0,99,2230	0/0:19,0:19:57.10:0,57,1223	0/0:15,0:14:42.04:0,42,1017	0/0:19,0:18:38.91:0,39,749	0/0:38,0:38:99:0,114,2332	0/0:84,0:84:99:0,219,4590	0/0:31,0:31:72.08:0,72,1243	0/0:24,0:24:44.74:0,45,726	0/0:26,0:26:57.18:0,57,1126	1/1:16,10:26:66.13:862,66,0	0/0:43,0:42:99:0,117,2628	0/0:36,0:36:75.29:0,75,2104	0/0:10,0:10:30.05:0,30,624
chr10	77661250	.	T	TA	1293.42	PASS	AB=0.944;AC=8;AF=0.143;AN=56;BaseQRankSum=-0.901;DP=479;FS=0.550;HRun=10;HaplotypeScore=53.5922;InbreedingCoeff=0.6334;MQ=75.82;MQ0=0;MQRankSum=-0.159;QD=16.17;ReadPosRankSum=-1.468;VQSLOD=3.3544;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:53.93:0,54,443	0/0:10,0:10:26.97:0,27,221	0/1:14,0:13:7.55:8,0,79	0/0:8,0:8:2.22:0,2,62	1/1:4,17:22:48.04:487,48,0	0/0:18,0:18:44.92:0,45,369	0/0:17,0:17:41.91:0,42,341	0/0:35,0:35:62.83:0,63,513	0/0:9,1:12:2.05:0,2,201	0/0:18,0:20:33.99:0,34,258	0/0:18,0:22:50.09:0,50,368	0/0:13,0:13:29.92:0,30,243	0/0:14,0:14:35.94:0,36,295	0/0:14,0:14:32.95:0,33,271	1/1:2,16:18:26.49:487,26,0	0/0:8,0:8:23.97:0,24,197	0/0:24,0:24:66.59:0,67,542	0/0:13,0:15:37.95:0,38,297	0/0:26,0:26:53.83:0,54,434	0/0:20,0:20:53.90:0,54,437	0/0:14,0:16:43.03:0,43,332	0/1:7,1:8:14.01:14,0,105	0/0:19,0:19:41.92:0,42,342	0/0:4,0:5:11.01:0,11,80	1/1:2,16:18:42.11:448,42,0	0/0:29,0:29:62.87:0,63,517	0/0:25,1:26:23.89:0,24,387	0/0:7,0:7:14.98:0,15,123
chr10	77662096	.	GGTGT	G	2001.31	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-5.892;DP=564;FS=5.279;HRun=0;HaplotypeScore=112.6273;InbreedingCoeff=0.8059;MQ=64.45;MQ0=31;MQRankSum=1.795;QD=9.48;ReadPosRankSum=1.899;VQSLOD=2.6763;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:38:43.62:0,44,740	1/1:8,0:8:8.83:65,9,0	0/0:28,0:14:9.02:0,9,115	0/0:29,0:18:6.02:0,6,111	0/0:21,0:21:14.64:0,15,224	1/1:5,0:13:5.38:46,5,0	1/1:26,0:25:1.93:289,2,0	0/0:21,0:21:18.06:0,18,245	0/0:16,0:14:12.04:0,12,185	1/1:17,9:25:23.08:348,23,0	0/0:9,4:13:0:0,0,0	0/0:23,0:23:30.09:0,30,433	0/0:22,0:22:23.45:0,23,354	0/0:16,0:16:6.02:0,6,100	0/0:21,0:21:25.90:0,26,403	1/1:6,0:11:5.89:72,6,0	1/1:29,0:29:39.09:524,39,0	0/0:10,0:9:14.84:0,15,192	1/1:17,3:16:5.92:72,6,0	1/1:9,12:20:6.02:74,6,0	1/1:22,0:19:18.05:251,18,0	0/0:29,0:26:23.85:0,24,392	0/0:23,0:22:18:0,18,232	0/0:26,0:24:11.62:0,12,192	0/0:15,0:15:15.05:0,15,245	1/1:5,5:10:12.44:113,12,0	1/1:11,0:11:15.05:221,15,0	1/1:12,0:8:9.03:129,9,0
chr10	77662128	.	TGAGAGAGAGAGA	T	82.40	PASS	AC=6;AF=0.136;AN=44;BaseQRankSum=1.443;DP=442;FS=24.661;HRun=0;HaplotypeScore=134.1828;InbreedingCoeff=0.3629;MQ=42.58;MQ0=32;MQRankSum=-1.590;QD=1.18;ReadPosRankSum=-1.345;VQSLOD=1.0024;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:5.96:0,6,44	0/0:6,0:6:0:0,0,0	./.	./.	0/0:12,0:12:3.01:0,3,144	./.	0/0:24,0:20:3.99:0,4,10	0/0:15,0:14:0:0,0,0	0/0:11,0:10:2.98:0,3,22	0/0:14,0:12:3.01:0,3,97	0/0:12,0:12:0.94:0,1,1	1/1:20,1:23:2.95:92,3,0	0/0:16,0:18:1.36:0,1,3	0/0:13,0:13:0.47:0,0,1	0/0:15,0:15:3.01:0,3,58	1/1:15,0:13:2.55:31,3,0	0/0:25,0:24:12.04:0,12,411	0/0:6,0:5:6.02:0,6,84	0/0:16,0:13:3.95:0,4,127	./.	0/0:9,0:7:3.01:0,3,95	1/1:30,2:28:3.20:54,3,0	0/0:17,0:17:0.47:0,0,1	0/0:26,3:25:8.59:0,9,67	./.	0/0:20,0:20:18.80:0,19,468	./.	0/0:10,0:6:0.94:0,1,2
chr10	77662853	.	AG	A	2898.45	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.317;DP=724;FS=1.381;HRun=3;HaplotypeScore=91.3272;InbreedingCoeff=0.9998;MQ=86.55;MQ0=0;MQRankSum=-2.511;QD=32.57;ReadPosRankSum=0.993;VQSLOD=3.7390;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,169,2338	0/0:13,0:13:39.13:0,39,561	0/0:23,0:23:59.79:0,60,689	0/0:25,0:24:42.83:0,43,729	1/1:2,24:26:66.10:779,66,0	0/0:25,0:25:72.23:0,72,1015	0/0:11,0:11:30.10:0,30,431	0/0:30,0:30:84.24:0,84,1171	0/0:23,0:23:63.21:0,63,907	0/0:23,0:23:63.21:0,63,892	0/0:21,0:21:60.20:0,60,863	0/0:23,0:23:69.22:0,69,967	0/0:27,0:27:78.22:0,78,1067	0/0:29,0:29:87.19:0,87,1174	1/1:0,38:38:99:1410,114,0	0/0:24,0:24:72.24:0,72,1036	0/0:50,0:50:99:0,150,2091	0/0:23,0:23:69.18:0,69,968	0/0:15,0:15:45.14:0,45,630	0/0:22,0:22:63.21:0,63,903	0/0:36,0:36:99:0,105,1488	0/0:21,0:21:60.20:0,60,861	0/0:24,0:24:72.24:0,72,1033	0/0:21,0:21:60.15:0,60,823	1/1:0,25:25:69.22:852,69,0	0/0:31,0:31:87.27:0,87,1218	0/0:23,0:23:69.23:0,69,993	0/0:14,0:14:42.14:0,42,605
chr10	77663311	.	C	CACATGTTTACAT	7351.66	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-3.992;DP=796;FS=12.751;HRun=0;HaplotypeScore=241.3784;InbreedingCoeff=0.8444;MQ=63.08;MQ0=0;MQRankSum=-8.886;QD=41.77;ReadPosRankSum=-6.144;VQSLOD=1.7826;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,99,2618	0/0:15,0:15:30.10:0,30,995	0/0:13,0:14:6.33:0,6,146	0/1:14,0:14:37.69:38,0,186	1/1:8,27:37:33.43:1233,33,0	0/0:23,0:23:60.15:0,60,1579	0/0:26,0:26:48.08:0,48,1226	1/1:46,0:46:90.17:1684,90,0	0/0:23,0:23:48.10:0,48,1225	0/0:35,0:35:72.19:0,72,2064	0/0:25,0:25:63.19:0,63,1926	0/0:32,0:32:74.58:0,75,2207	0/0:25,0:25:45.06:0,45,1230	0/0:25,0:25:66.12:0,66,1744	1/1:8,28:38:24.08:1404,24,0	0/0:32,0:32:60.12:0,60,1539	0/0:35,0:35:78.21:0,78,2112	0/0:24,0:24:57.12:0,57,1509	0/0:21,0:21:30.04:0,30,689	0/0:30,0:30:72.20:0,72,2220	0/0:19,0:19:42.07:0,42,947	0/0:25,0:25:60.11:0,60,1451	0/0:31,0:31:60.16:0,60,1626	0/0:28,0:28:60.11:0,60,1455	1/1:4,33:41:51.18:2993,51,0	0/0:26,0:26:51.17:0,51,1673	0/0:30,0:30:57.18:0,57,1691	0/0:28,0:28:78.22:0,78,2411
chr10	77663621	.	AG	A	983.57	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.557;DP=851;FS=2.433;HRun=3;HaplotypeScore=96.4721;InbreedingCoeff=0.9997;MQ=84.97;MQ0=0;MQRankSum=-1.428;QD=32.79;ReadPosRankSum=1.850;VQSLOD=3.9081;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,163,2307	0/0:13,0:13:39.13:0,39,561	0/0:29,0:29:78.25:0,78,1060	0/0:25,0:25:72.17:0,72,922	0/0:32,0:32:75.12:0,75,1050	0/0:29,0:27:81.27:0,81,1166	0/0:39,0:39:99:0,108,1510	0/0:26,0:26:78.26:0,78,1096	0/0:30,0:30:90.30:0,90,1294	0/0:32,0:32:90.30:0,90,1295	0/0:20,0:20:57.19:0,57,819	0/0:48,0:48:99:0,141,1973	0/0:39,0:39:99:0,114,1605	0/0:22,0:22:60.20:0,60,864	0/0:35,0:35:93.23:0,93,1249	0/0:29,0:29:84.28:0,84,1210	0/0:46,0:46:99:0,129,1818	1/1:0,30:30:87.27:1078,87,0	0/0:25,0:25:66.22:0,66,934	0/0:21,0:21:63.21:0,63,907	0/0:57,0:57:99:0,169,2400	0/0:22,0:22:60.19:0,60,841	0/0:18,0:18:48.15:0,48,673	0/0:46,0:46:99:0,132,1880	0/0:24,0:23:66.22:0,66,932	0/0:12,0:12:33.10:0,33,457	0/0:23,0:23:69.23:0,69,993	0/0:22,0:22:63.15:0,63,844
chr10	77663862	.	AG	A	1095.95	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.608;DP=817;FS=5.561;HRun=2;HaplotypeScore=81.3957;InbreedingCoeff=0.9960;MQ=86.49;MQ0=0;MQRankSum=0.469;QD=34.25;ReadPosRankSum=-4.049;VQSLOD=2.0851;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:69,0:69:99:0,205,2994	0/0:8,0:8:24.08:0,24,359	0/0:23,0:23:63.16:0,63,885	0/0:31,0:31:84.07:0,84,1180	0/0:19,0:19:54.18:0,54,809	0/0:19,0:19:57.19:0,57,854	0/0:42,0:42:99:0,123,1844	1/1:1,31:32:93.28:1191,93,0	0/0:33,0:33:93.31:0,93,1386	0/0:36,0:36:99:0,99,1435	0/0:10,0:10:27.09:0,27,403	0/0:33,0:33:99:0,99,1484	0/0:44,0:44:99:0,129,1922	0/0:24,0:24:72.24:0,72,1079	0/0:36,0:36:99:0,105,1556	0/0:21,0:21:63.20:0,63,924	0/0:47,0:47:99:0,138,2038	0/0:32,0:32:96.32:0,96,1418	0/0:25,0:25:72.23:0,72,1047	0/0:20,0:20:60.19:0,60,880	0/0:49,0:49:99:0,147,2200	0/0:30,0:30:87.28:0,87,1282	0/0:25,0:25:69.23:0,69,1032	0/0:31,0:31:90.29:0,90,1325	0/0:22,0:22:66.20:0,66,950	0/0:27,0:26:81.25:0,81,1159	0/0:19,0:19:57.19:0,57,853	0/0:10,0:10:27.09:0,27,404
chr10	77665086	.	A	AT	5125.46	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-13.502;DP=681;FS=9.506;HRun=9;HaplotypeScore=63.8837;InbreedingCoeff=0.9917;MQ=77.91;MQ0=0;MQRankSum=-1.105;QD=26.70;ReadPosRankSum=0.205;VQSLOD=4.9169;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,117,1016	0/0:14,0:14:38.99:0,39,339	0/0:20,0:20:44.33:0,44,365	0/0:12,0:12:9.82:0,10,192	0/0:26,0:26:74.98:0,75,651	0/0:22,0:22:59.98:0,60,521	0/0:25,0:25:74.99:0,75,651	0/0:33,0:33:83.93:0,84,723	1/1:2,20:22:57.15:631,57,0	0/0:25,0:25:71.98:0,72,625	0/0:26,0:26:74.97:0,75,647	1/1:2,28:30:84.23:929,84,0	1/1:2,13:15:39.11:431,39,0	1/1:5,21:26:57.15:630,57,0	0/0:21,0:22:59.02:0,59,501	0/0:25,0:25:68.96:0,69,594	0/0:35,0:35:86.98:0,87,755	1/1:4,25:29:69.19:763,69,0	0/0:19,0:19:47.98:0,48,417	0/0:27,0:27:77.97:0,78,674	0/0:19,0:19:53.98:0,54,469	1/1:2,20:22:51.10:550,51,0	1/1:3,21:24:57.15:626,57,0	1/1:5,19:24:51.14:564,51,0	0/0:20,0:20:44.96:0,45,391	0/0:36,0:36:89.98:0,90,781	0/0:23,0:23:65.98:0,66,573	0/0:17,0:17:35.99:0,36,313
chr10	77665354	.	TGG	T	8130.14	PASS	AB=0.727;AC=33;AF=0.589;AN=56;BaseQRankSum=-2.755;DP=557;FS=22.954;HRun=11;HaplotypeScore=93.7624;InbreedingCoeff=0.8468;MQ=73.17;MQ0=1;MQRankSum=-0.508;QD=23.30;ReadPosRankSum=4.364;VQSLOD=2.6502;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,1:39:2.63:0,3,192	1/1:0,10:10:30.08:319,30,0	0/0:12,0:12:20.54:0,21,153	0/0:12,1:13:14.62:0,15,147	1/1:2,17:19:45.04:467,45,0	1/1:3,9:11:15.03:160,15,0	1/1:3,26:29:81.20:862,81,0	0/1:10,2:16:42.37:42,0,47	0/0:21,0:23:48.09:0,48,584	1/1:3,16:19:45.09:475,45,0	1/1:5,11:17:32.80:331,33,0	0/0:20,0:22:38.56:0,39,447	0/0:13,0:13:23.95:0,24,264	0/0:11,0:14:12.02:0,12,120	1/1:4,25:30:71.91:746,72,0	1/1:2,16:19:47.85:491,48,0	1/1:7,31:40:92.69:949,93,0	0/0:10,0:32:57.39:0,57,197	1/1:4,10:14:30.06:319,30,0	1/1:4,10:15:20.99:277,21,0	1/1:8,19:27:63.08:650,63,0	0/0:11,0:16:11.52:0,12,130	0/0:6,0:6:2.42:0,2,42	0/0:9,0:17:9.03:0,9,117	1/1:1,19:20:48.12:510,48,0	1/1:7,21:28:63.12:670,63,0	1/1:3,20:23:60.14:638,60,0	1/1:4,7:11:21.04:223,21,0
chr10	77665364	.	GGA	G	1643.61	PASS	AB=0.985;AC=21;AF=0.375;AN=56;BaseQRankSum=7.844;DP=512;FS=28.734;HRun=0;HaplotypeScore=110.1733;InbreedingCoeff=0.1662;MQ=69.42;MQ0=1;MQRankSum=-0.786;QD=5.10;ReadPosRankSum=9.981;VQSLOD=0.5597;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:78.46:0,78,496	1/1:10,0:10:24.91:103,25,0	0/0:11,0:10:12.35:0,12,199	0/0:9,0:9:23.93:0,24,259	0/1:19,0:19:11.90:66,0,12	0/1:11,0:10:24.69:25,0,32	0/1:30,1:31:27.16:188,0,27	0/0:15,0:15:24.22:0,24,230	0/0:18,0:18:47.78:0,48,668	0/1:19,0:19:52.79:85,0,53	1/1:12,0:12:16.28:75,16,0	0/0:19,0:19:41.85:0,42,545	0/0:13,0:13:36.02:0,36,414	0/0:10,0:10:16.83:0,17,168	0/1:30,0:30:46.06:157,0,46	1/1:18,0:18:11.73:81,12,0	0/1:36,1:37:7.41:204,0,7	0/0:30,0:30:84.09:0,84,495	0/1:16,0:16:38.30:38,0,75	0/1:12,0:12:7.27:83,0,7	0/1:26,1:27:59.89:199,0,60	0/0:11,0:11:17.85:0,18,192	0/0:4,0:4:2.42:0,2,50	0/0:16,0:16:17.94:0,18,197	0/1:26,1:27:99:133,0,119	1/1:22,0:22:17.27:155,17,0	0/1:23,1:24:8.58:181,0,9	1/1:7,0:7:16.39:57,16,0
chr10	77667375	.	TCACACA	T	1018.30	PASS	AB=1.000;AC=21;AF=0.656;AN=32;BaseQRankSum=0.521;DP=447;FS=9.549;HRun=0;HaplotypeScore=89.0179;InbreedingCoeff=0.4418;MQ=33.38;MQ0=146;MQRankSum=0.164;QD=4.26;ReadPosRankSum=2.190;VQSLOD=1.0481;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:23:23.99:0,24,431	./.	./.	./.	1/1:15,0:12:6.02:108,6,0	./.	0/1:28,0:15:0:0,0,0	./.	0/1:16,0:10:0:0,0,0	1/1:13,6:16:18.06:301,18,0	0/0:10,0:11:2.97:0,3,20	0/0:13,0:7:3.01:0,3,35	0/1:7,0:4:0:0,0,0	./.	./.	0/1:24,0:17:26.30:26,0,133	1/1:14,0:9:9.03:135,9,0	./.	./.	./.	1/1:30,0:20:9.03:157,9,0	1/1:21,0:20:1.25:3,1,0	0/1:15,0:12:0:0,0,0	1/1:16,0:7:9.01:90,9,0	1/1:17,0:14:6.02:100,6,0	1/1:11,5:13:12.04:204,12,0	./.	./.
chr10	77667420	.	CACACACACACAGAGAG	C	961.58	PASS	AB=1.000;AC=19;AF=0.396;AN=48;BaseQRankSum=-2.445;DP=500;FS=45.453;HRun=0;HaplotypeScore=157.4814;InbreedingCoeff=0.3263;MQ=34.42;MQ0=129;MQRankSum=0.865;QD=3.40;ReadPosRankSum=-4.394;VQSLOD=-0.7083;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:35:69.65:0,70,2458	0/0:11,0:7:12.04:0,12,358	./.	./.	1/1:24,0:19:8.89:141,9,0	0/1:11,0:7:0:0,0,0	0/1:29,0:18:1.95:2,0,327	0/1:7,0:3:0:0,0,0	1/1:2,18:19:6.02:110,6,0	0/1:33,0:25:59.38:59,0,994	0/0:14,0:10:6.02:0,6,183	0/0:12,0:9:2.83:0,3,110	1/1:6,4:4:3.01:62,3,0	./.	./.	0/0:25,0:16:15.05:0,15,492	0/1:25,0:18:33.38:33,0,704	0/0:4,0:3:3.01:0,3,115	0/0:4,0:1:3.01:0,3,74	0/0:19,0:14:18.06:0,18,555	0/1:48,0:32:3.16:3,0,1093	1/1:11,17:23:8.68:69,9,0	1/1:3,9:11:3.01:40,3,0	1/1:24,0:16:26.58:567,27,0	0/1:12,0:9:20.79:21,0,63	0/0:22,0:16:40.32:0,40,881	0/0:15,0:10:18.06:0,18,505	0/0:1,0:1:3.01:0,3,60
chr10	77667619	.	CACACAGACACAGAAACACAAAGACACACAGATATACCAG	C	4230.33	PASS	AB=0.941;AC=21;AF=0.420;AN=50;BaseQRankSum=5.647;DP=473;FS=36.311;HRun=0;HaplotypeScore=289.0028;InbreedingCoeff=0.6420;MQ=34.88;MQ0=104;MQRankSum=-5.076;QD=29.58;ReadPosRankSum=1.513;VQSLOD=2.7384;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:35:72.72:0,73,6986	./.	0/0:21,0:3:9.03:0,9,778	0/0:32,0:9:27.09:0,27,2382	0/0:9,0:7:0.47:0,0,1	1/1:5,6:8:3.01:183,3,0	1/1:16,0:10:5.98:261,6,0	0/0:31,0:24:54.14:0,54,3391	0/0:26,0:23:54.19:0,54,4749	1/1:5,9:13:23.56:1189,24,0	0/0:2,4:4:0:0,0,1	0/0:31,0:26:60.21:0,60,6433	0/0:23,0:21:48.16:0,48,5694	0/0:25,0:24:60.21:0,60,6174	1/1:6,16:20:3.01:105,3,0	1/1:7,9:13:11.70:853,12,0	0/1:15,1:12:99:392,0,284	1/1:2,0:2:3.01:122,3,0	1/1:5,0:4:2.97:20,3,0	./.	1/1:22,0:11:8.92:215,9,0	0/0:15,0:13:33.11:0,33,3629	0/0:6,0:5:12.04:0,12,1391	0/0:48,0:41:77.17:0,77,9605	0/0:2,7:8:0:0,0,0	1/1:6,5:11:7.27:594,7,0	1/1:1,7:8:2.96:296,3,0	./.
chr10	77667629	.	CAGAA	C	629.58	PASS	AB=0.933;AC=19;AF=0.396;AN=48;BaseQRankSum=6.916;DP=421;FS=29.806;HRun=0;HaplotypeScore=118.1271;InbreedingCoeff=0.6301;MQ=42.68;MQ0=72;MQRankSum=-5.285;QD=8.07;ReadPosRankSum=2.617;VQSLOD=0.8082;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:37:80.91:0,81,1715	./.	0/0:25,0:5:15.05:0,15,379	0/0:38,0:18:51.12:0,51,1238	0/0:0,3:3:0:0,0,0	1/1:8,0:6:1.55:4,2,0	1/1:1,8:7:8.71:151,9,0	0/0:32,0:27:75.20:0,75,1810	0/0:29,0:26:68.86:0,69,1219	1/1:9,0:9:21.03:282,21,0	0/1:5,0:4:0.01:0,0,0	0/0:27,0:24:63.01:0,63,1365	0/0:27,0:25:66.02:0,66,1471	0/0:25,0:24:69.11:0,69,1572	./.	1/1:10,0:9:7.73:68,8,0	0/1:9,3:11:99:109,0,107	1/1:0,1:1:3.01:60,3,0	0/1:3,0:2:0:0,0,0	./.	1/1:2,4:8:2.77:24,3,0	0/0:16,0:14:39:0,39,921	0/0:6,0:5:15.05:0,15,400	0/0:42,0:38:81.17:0,81,1956	0/0:7,0:7:0:0,0,0	1/1:5,0:5:6:55,6,0	1/1:7,0:7:3:28,3,0	./.
chr10	77667658	.	G	GAC	1393.46	PASS	AB=1.000;AC=26;AF=0.481;AN=54;BaseQRankSum=8.713;DP=554;FS=78.568;HRun=0;HaplotypeScore=169.3511;InbreedingCoeff=0.7504;MQ=78.99;MQ0=7;MQRankSum=-9.114;QD=10.25;ReadPosRankSum=-1.188;VQSLOD=0.2433;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,102,1344	1/1:2,0:2:5.65:31,6,0	0/0:36,0:33:96.23:0,96,1232	0/0:53,0:50:99:0,140,1775	1/1:7,1:8:2.78:53,3,0	1/1:12,0:12:3.01:44,3,0	1/1:12,3:16:17.46:210,17,0	0/0:49,0:49:99:0,126,1671	0/0:34,0:34:78.26:0,78,1069	0/1:18,0:17:2.59:206,0,3	0/1:6,0:6:0.01:0,0,0	0/0:33,0:32:87.19:0,87,1143	0/0:31,0:31:81.27:0,81,1110	0/0:33,0:33:84.26:0,84,1127	1/1:25,0:24:22.40:136,22,0	1/1:12,0:12:17.23:133,17,0	1/1:6,1:7:10.77:118,11,0	1/1:1,3:4:5.98:73,6,0	1/1:5,0:5:15.04:190,15,0	0/0:9,0:9:0:0,0,0	0/0:8,1:7:2.74:0,3,12	0/0:20,0:18:54.18:0,54,732	0/0:12,0:12:27.08:0,27,354	0/0:45,0:43:99:0,105,1424	./.	1/1:9,0:9:6.08:180,6,0	1/1:10,0:10:11.24:117,11,0	1/1:2,0:2:6.02:93,6,0
chr10	77667922	.	ACCCACAGATAACC	A	2130.21	PASS	AB=0.601;AC=11;AF=0.196;AN=56;BaseQRankSum=6.186;DP=817;FS=19.903;HRun=0;HaplotypeScore=345.4457;InbreedingCoeff=0.7755;MQ=76.82;MQ0=9;MQRankSum=-7.785;QD=11.97;ReadPosRankSum=2.519;VQSLOD=0.9994;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,119,5678	0/0:13,0:13:36.12:0,36,1501	0/0:39,0:38:87.23:0,87,3102	0/0:46,0:38:72.14:0,72,2984	0/0:27,0:27:56.89:0,57,2211	0/0:21,0:21:42.05:0,42,1014	0/0:34,0:34:78.24:0,78,3080	0/0:47,0:47:99:0,117,4289	1/1:8,19:26:21.07:680,21,0	0/0:42,0:42:99:0,108,4167	0/0:16,0:16:33.58:0,34,1016	1/1:8,23:31:18.06:612,18,0	1/1:6,14:21:18.06:591,18,0	1/1:6,10:16:9.03:294,9,0	0/0:47,0:48:99:0,120,4886	0/0:25,0:24:42.55:0,43,1462	0/0:33,0:33:37:0,37,2775	0/0:27,0:26:75.19:0,75,2924	0/0:26,0:26:62.53:0,63,2545	0/0:26,0:26:60.20:0,60,2566	0/0:55,0:55:99:0,105,4191	0/1:7,14:19:0.41:1,0,0	0/1:5,12:17:0.11:0,0,1	0/1:17,28:42:6.79:108,0,7	0/0:18,0:18:39.11:0,39,1227	0/0:34,0:34:84.27:0,84,3519	0/0:15,0:15:36.12:0,36,1774	0/0:2,0:2:3.01:0,3,178
chr10	77667932	.	AACC	A	359.21	PASS	AB=0.829;AC=6;AF=0.107;AN=56;BaseQRankSum=8.133;DP=778;FS=2.774;HRun=0;HaplotypeScore=227.0467;InbreedingCoeff=0.2185;MQ=73.13;MQ0=10;MQRankSum=-7.373;QD=2.62;ReadPosRankSum=1.594;VQSLOD=2.1547;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:99:0,134,3115	0/0:13,0:13:36.12:0,36,873	0/0:39,0:34:91.01:0,91,2118	0/0:37,0:29:87.10:0,87,1899	0/0:25,0:25:59.47:0,59,1338	0/0:21,0:22:49.10:0,49,955	0/0:30,0:30:87.21:0,87,1928	0/0:51,0:51:99:0,153,3462	0/1:22,6:27:58.66:115,0,59	0/0:39,0:39:99:0,114,2667	0/0:15,0:15:39.59:0,40,835	1/1:26,3:30:16.34:95,16,0	0/1:16,7:22:15.34:215,0,15	0/1:10,3:15:51.79:52,0,63	0/0:47,0:47:99:0,133,2945	0/0:24,0:23:57.16:0,57,1145	0/0:27,0:28:68.59:0,69,1618	0/0:25,0:26:67.71:0,68,1759	0/0:28,0:28:81.19:0,81,1782	0/0:23,0:23:60.20:0,60,1425	0/0:49,0:50:99:0,113,2459	0/0:17,1:16:17.61:0,18,124	0/0:14,1:15:2.96:0,3,20	0/1:35,1:38:7:7,0,56	0/0:16,0:16:45:0,45,882	0/0:31,0:31:93.30:0,93,2116	0/0:15,0:15:39.13:0,39,959	0/0:1,0:1:3.01:0,3,74
chr10	77667945	.	A	AAC	4140.07	PASS	AB=0.899;AC=24;AF=0.429;AN=56;BaseQRankSum=-3.562;DP=814;FS=24.846;HRun=0;HaplotypeScore=244.0379;InbreedingCoeff=0.6954;MQ=60.53;MQ0=14;MQRankSum=2.795;QD=12.43;ReadPosRankSum=1.936;VQSLOD=1.8015;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:83.66:0,84,918	1/1:9,0:9:18.04:231,18,0	0/0:34,0:21:3:0,3,91	0/0:39,0:24:10.80:0,11,100	0/0:15,0:21:5.20:0,5,46	1/1:12,11:23:21.06:274,21,0	0/1:25,6:31:32.84:336,0,33	0/0:46,0:45:60.78:0,61,587	0/0:32,0:32:29.23:0,29,256	1/1:30,3:34:14.63:558,15,0	1/1:6,9:14:3.01:46,3,0	0/0:36,0:38:13.54:0,14,181	0/0:26,0:26:33.01:0,33,295	0/0:18,0:18:13.53:0,14,162	0/0:31,0:50:56.27:0,56,259	1/1:17,6:20:14.50:278,14,0	1/1:25,3:29:5.10:284,5,0	0/0:23,0:24:26.23:0,26,101	1/1:26,3:31:41.61:479,42,0	0/1:23,1:23:30.46:247,0,30	1/1:58,3:61:23.81:396,24,0	0/0:20,0:21:10.81:0,11,68	0/0:18,0:17:6.02:0,6,68	0/0:39,0:46:9.24:0,9,42	0/0:8,0:13:11.12:0,11,80	1/1:25,5:30:46.08:594,46,0	1/1:13,4:17:26.98:370,27,0	1/1:4,0:4:3.01:47,3,0
chr10	77667970	.	ACT	A	5584.35	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=1.065;DP=923;FS=13.645;HRun=0;HaplotypeScore=281.7574;InbreedingCoeff=-0.1741;MQ=47.79;MQ0=16;MQRankSum=5.203;QD=6.75;ReadPosRankSum=-6.699;VQSLOD=2.3360;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:54,2:55:67.54:0,68,1432	0/1:12,0:12:46.98:51,0,47	0/0:40,0:13:5.20:0,5,88	0/1:52,0:12:9.53:10,0,73	1/1:23,0:23:16.62:84,17,0	0/1:27,0:27:33.62:170,0,34	0/1:30,0:30:90.05:247,0,90	0/1:49,0:46:99:254,0,350	1/1:44,0:44:38.23:404,38,0	0/1:33,0:33:99:313,0,119	1/1:17,0:16:0.87:61,1,0	1/1:40,0:40:36.30:392,36,0	1/1:32,0:30:9.19:172,9,0	1/1:28,0:28:40.56:268,41,0	1/1:46,0:46:70.31:371,70,0	0/1:30,0:28:49.60:58,0,50	0/1:36,0:34:99:337,0,105	1/1:26,6:31:88.47:764,88,0	0/1:27,0:25:74.29:152,0,74	0/1:21,0:20:45.36:109,0,45	0/1:62,0:62:48.88:339,0,49	1/1:28,0:28:22.43:176,22,0	1/1:17,0:16:10.95:132,11,0	1/1:56,0:55:38.49:250,38,0	1/1:25,0:24:30.80:199,31,0	0/1:30,0:30:99:249,0,122	0/1:23,0:23:16.10:16,0,108	0/1:6,0:6:7.73:8,0,60
chr10	77667972	.	TCACA	T	6799.15	PASS	AB=0.879;AC=22;AF=0.393;AN=56;BaseQRankSum=-4.444;DP=943;FS=3.852;HRun=0;HaplotypeScore=305.0125;InbreedingCoeff=0.7986;MQ=48.52;MQ0=17;MQRankSum=-2.320;QD=16.00;ReadPosRankSum=-1.974;VQSLOD=3.5297;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,128,2309	0/0:10,0:11:17.53:0,18,253	0/0:44,0:15:19.28:0,19,230	0/0:56,0:14:16.29:0,16,150	1/1:6,0:23:11.55:77,12,0	0/0:23,0:28:18.73:0,19,256	0/0:27,0:30:20.27:0,20,274	1/1:24,25:46:74.57:952,75,0	1/1:30,13:44:71.78:1149,72,0	0/0:31,0:34:40.19:0,40,663	0/0:15,0:17:9.63:0,10,102	1/1:27,14:41:78.47:1142,78,0	1/1:19,15:32:63.14:873,63,0	1/1:19,9:28:54.16:821,54,0	1/1:10,1:47:43.02:388,43,0	0/0:8,0:32:19.11:0,19,239	0/0:30,0:33:0.96:0,1,416	0/1:34,0:33:5.07:5,0,158	0/0:23,0:24:28.29:0,28,377	0/0:20,0:19:5.44:0,5,93	0/0:55,0:61:39.65:0,40,560	1/1:20,7:27:33.35:417,33,0	1/1:12,5:16:25.92:323,26,0	1/1:44,11:55:38.48:600,38,0	0/1:17,0:24:40.18:53,0,40	0/0:31,0:32:50.08:0,50,768	0/0:8,0:22:28.61:0,29,367	0/0:8,0:8:15.52:0,16,273
chr10	77668808	.	TCATGGG	T	12247.79	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=16.193;DP=595;FS=10.254;HRun=0;HaplotypeScore=137.2556;InbreedingCoeff=0.9763;MQ=86.04;MQ0=0;MQRankSum=-16.182;QD=51.25;ReadPosRankSum=1.544;VQSLOD=4.5489;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,3500	1/1:0,8:8:18.06:442,18,0	0/0:25,0:25:71.44:0,71,2331	0/0:23,0:23:56.84:0,57,1865	0/0:24,0:24:66.23:0,66,2250	1/1:2,17:19:48.04:1050,48,0	1/1:2,21:23:38.93:790,39,0	0/0:24,0:24:62.88:0,63,2135	0/0:23,0:23:69.19:0,69,2438	1/1:2,21:23:63.22:1537,63,0	1/1:1,16:17:33.05:754,33,0	0/0:25,0:25:75.26:0,75,2669	0/0:26,0:26:75.24:0,75,2611	0/0:22,0:22:66.23:0,66,2410	0/0:27,0:27:81.28:0,81,2938	1/1:0,21:21:53.96:1326,54,0	1/1:3,20:23:39.07:903,39,0	0/0:22,0:22:63.20:0,63,2213	1/1:1,20:21:45.26:1241,45,0	1/1:2,22:24:54.18:1309,54,0	1/1:5,11:16:5.97:93,6,0	0/0:18,0:18:54.19:0,54,1910	0/0:14,0:14:39.13:0,39,1392	0/0:26,0:26:78.27:0,78,2829	0/0:22,0:22:63.22:0,63,2258	1/1:2,24:26:69.24:1697,69,0	1/1:0,14:14:36.12:885,36,0	1/1:0,4:4:9.03:221,9,0
chr10	77674979	.	CATGATCTCTCTT	C	16056.61	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.670;DP=761;FS=0.000;HRun=0;HaplotypeScore=285.9941;InbreedingCoeff=0.9809;MQ=88.39;MQ0=1;MQRankSum=-17.403;QD=89.20;ReadPosRankSum=-0.203;VQSLOD=4.0807;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,6242	0/0:17,0:17:51.18:0,51,2867	0/0:27,0:27:66.09:0,66,3483	0/0:37,0:37:99:0,111,5273	1/1:5,19:24:51.09:1828,51,0	1/1:3,21:24:63.22:2429,63,0	1/1:6,10:16:36.12:1309,36,0	1/1:8,11:19:36.12:1344,36,0	0/0:35,0:35:99:0,105,6203	0/0:30,0:30:87.30:0,87,5227	0/0:25,0:25:75.26:0,75,4630	0/0:31,0:31:90.30:0,90,5277	0/0:34,0:34:99:0,102,5543	0/0:27,0:27:78.27:0,78,4604	1/1:6,19:25:63.20:2290,63,0	1/1:7,29:36:99:3563,99,0	1/1:5,8:13:24:749,24,0	0/0:7,0:7:18.06:0,18,1127	0/0:21,0:21:63.22:0,63,3487	0/0:37,0:37:99:0,111,6613	0/0:70,0:69:99:0,205,12468	0/0:24,0:24:72.25:0,72,4507	0/0:20,0:20:60.21:0,60,3616	0/0:24,0:24:72.23:0,72,4152	1/1:1,22:23:66.23:2545,66,0	0/0:31,0:31:93.31:0,93,5303	0/0:46,0:46:99:0,138,8312	0/0:2,0:2:6.02:0,6,375
chr10	77675010	.	TG	T	7295.84	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=17.374;DP=783;FS=4.528;HRun=2;HaplotypeScore=150.9626;InbreedingCoeff=0.9987;MQ=84.31;MQ0=1;MQRankSum=-12.086;QD=31.58;ReadPosRankSum=-2.407;VQSLOD=3.6511;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1530	0/0:12,0:12:36.12:0,36,536	0/0:26,0:26:63.16:0,63,875	0/0:30,0:30:22.79:0,23,867	1/1:0,30:30:60.19:776,60,0	1/1:1,25:26:69.22:895,69,0	1/1:0,24:24:57.19:739,57,0	1/1:2,35:37:99:1308,102,0	0/0:28,0:28:84.28:0,84,1254	0/0:31,0:31:90.30:0,90,1349	0/0:29,0:29:84.26:0,84,1215	0/0:27,0:27:78.24:0,78,1129	0/0:35,0:35:99:0,105,1553	0/0:28,0:28:81.24:0,81,1184	1/1:1,25:26:72.23:933,72,0	1/1:3,36:39:99:1322,102,0	1/1:1,14:15:29.79:389,30,0	0/0:8,0:8:21.07:0,21,315	0/0:19,0:19:54.17:0,54,791	0/0:39,0:39:99:0,114,1707	0/0:62,0:61:99:0,184,2719	0/0:26,0:26:78.26:0,78,1169	0/0:15,0:15:45.15:0,45,675	0/0:21,0:21:63.20:0,63,924	1/1:2,32:34:72.23:934,72,0	0/0:24,0:24:72.24:0,72,1079	0/0:45,0:45:99:0,129,1929	0/0:12,0:12:36.12:0,36,540
chr10	77675658	.	AGTGTGTGTGTGTGT	A	13873	PASS	AB=0.720;AC=29;AF=0.537;AN=54;BaseQRankSum=10.694;DP=783;FS=6.416;HRun=0;HaplotypeScore=273.1276;InbreedingCoeff=0.8085;MQ=62.80;MQ0=29;MQRankSum=-10.023;QD=36.70;ReadPosRankSum=4.242;VQSLOD=2.6915;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:45:81.28:0,81,4268	1/1:2,0:8:9.03:293,9,0	./.	0/0:58,0:31:18.06:0,18,501	0/0:11,0:29:40.52:0,41,1937	0/0:18,0:27:18.06:0,18,944	0/0:13,0:24:18.06:0,18,1062	0/0:37,0:36:44.62:0,45,1528	1/1:10,21:31:33.11:1292,33,0	1/1:9,0:24:21.21:859,21,0	0/1:18,0:23:5.86:393,0,6	0/1:15,11:28:0.83:761,0,1	1/1:6,22:30:39.35:1499,39,0	1/1:5,18:26:51.18:1943,51,0	0/0:19,0:31:24.55:0,25,1188	0/0:16,0:26:24.05:0,24,929	0/0:13,0:26:36.01:0,36,1546	0/0:11,0:15:27.04:0,27,1429	0/1:10,0:21:1.46:777,0,1	1/1:8,0:19:30.06:799,30,0	1/1:17,0:26:3.01:72,3,0	1/1:5,14:20:24.08:927,24,0	1/1:7,17:25:30.10:1184,30,0	1/1:12,11:23:12:375,12,0	0/0:13,0:25:26.08:0,26,905	1/1:8,0:31:34.67:1427,35,0	1/1:14,0:26:12.04:391,12,0	1/1:3,0:13:27.09:880,27,0
chr10	77676740	.	G	GA	436.06	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.747;DP=682;FS=0.000;HRun=9;HaplotypeScore=65.4021;InbreedingCoeff=0.9258;MQ=81.53;MQ0=0;MQRankSum=-1.861;QD=24.23;ReadPosRankSum=-0.641;VQSLOD=4.0991;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,126,1082	0/0:13,0:13:32.98:0,33,286	0/0:23,0:23:32.48:0,32,269	0/0:15,0:15:9.94:0,10,200	0/0:33,0:33:83.97:0,84,729	0/0:26,0:27:76.99:0,77,652	0/0:23,0:24:52.97:0,53,445	0/0:36,0:36:86.95:0,87,752	0/0:29,0:29:80.92:0,81,692	0/0:18,0:18:35.98:0,36,312	0/0:25,0:25:65.93:0,66,561	0/0:18,0:18:53.99:0,54,469	0/0:25,0:25:68.97:0,69,595	0/0:20,0:20:53.98:0,54,469	0/0:24,0:24:68.98:0,69,598	0/0:23,1:24:35.77:0,36,534	0/0:30,0:30:71.96:0,72,620	1/1:1,17:18:48.13:531,48,0	0/0:36,0:36:80.90:0,81,703	0/0:39,0:39:95.93:0,96,829	0/0:21,0:21:53.98:0,54,466	0/0:16,0:16:32.95:0,33,282	0/0:16,0:16:47.99:0,48,416	0/0:19,0:19:50.99:0,51,443	0/0:17,0:17:41.97:0,42,365	0/0:26,0:26:65.01:0,65,552	0/0:39,0:39:99:0,105,911	0/0:4,0:4:12:0,12,104
chr10	77677101	.	AT	A	13322.11	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=12.624;DP=747;FS=0.269;HRun=2;HaplotypeScore=78.9286;InbreedingCoeff=0.9995;MQ=92.13;MQ0=0;MQRankSum=-1.524;QD=35.34;ReadPosRankSum=3.908;VQSLOD=5.3307;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1499	1/1:1,14:15:29.99:389,30,0	0/0:36,0:36:99:0,102,1409	0/0:26,0:26:63.18:0,63,919	0/0:31,0:31:93.31:0,93,1373	0/0:25,0:25:75.23:0,75,1084	0/0:22,0:22:60.20:0,60,899	0/0:48,0:47:99:0,144,2136	1/1:0,33:33:90.29:1169,90,0	1/1:0,36:36:99:1371,108,0	1/1:1,20:21:60.19:778,60,0	1/1:0,15:15:39.13:506,39,0	1/1:0,28:28:72.23:932,72,0	1/1:0,23:23:63.20:818,63,0	0/0:40,0:40:99:0,120,1798	0/0:21,1:22:27.27:0,27,905	0/0:32,0:32:96.32:0,96,1434	0/0:23,0:23:69.19:0,69,1009	1/1:0,24:24:72.23:934,72,0	1/1:0,22:22:63.20:812,63,0	1/1:0,32:32:90.29:1169,90,0	1/1:1,22:23:60.19:778,60,0	1/1:0,19:19:57.19:740,57,0	1/1:1,22:23:54.18:701,54,0	0/0:29,0:29:87.29:0,87,1304	1/1:0,26:26:78.24:997,78,0	1/1:0,28:28:72.14:934,72,0	1/1:0,9:9:24.06:295,24,0
chr10	77677300	.	AATG	A	754.43	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.826;DP=750;FS=0.000;HRun=0;HaplotypeScore=101.2230;InbreedingCoeff=0.9694;MQ=89.03;MQ0=0;MQRankSum=-1.773;QD=35.93;ReadPosRankSum=-0.289;VQSLOD=3.8159;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,2733	0/0:10,0:10:27.09:0,27,590	0/0:28,0:28:77.48:0,77,1631	0/0:28,0:28:72.25:0,72,1481	0/0:37,0:37:99:0,105,2357	0/0:37,0:37:99:0,108,2340	0/0:26,0:26:72.23:0,72,1556	0/0:33,0:33:87.30:0,87,1866	0/0:28,0:28:81.28:0,81,1769	0/0:30,0:30:90.31:0,90,2016	0/0:17,0:17:51.18:0,51,1154	0/0:16,0:16:45.15:0,45,1019	0/0:30,0:30:84.27:0,84,1847	0/0:20,0:20:60.21:0,60,1327	0/0:34,0:34:99:0,99,2147	0/0:25,0:25:72.25:0,72,1624	0/0:38,0:37:96.33:0,96,2153	1/1:2,19:21:51.17:849,51,0	0/0:18,0:18:51.15:0,51,1081	0/0:35,0:35:93.32:0,93,2068	0/0:29,0:29:84.29:0,84,1863	0/0:31,0:31:93.32:0,93,2038	0/0:19,0:19:57.20:0,57,1268	0/0:26,0:26:78.27:0,78,1685	0/0:35,0:35:99:0,99,2236	0/0:20,0:20:60.21:0,60,1359	0/0:32,0:32:90.31:0,90,2038	0/0:4,0:4:12.04:0,12,272
chr10	77678811	.	A	ATT	8829.55	PASS	AB=0.558;AC=48;AF=0.857;AN=56;BaseQRankSum=0.624;DP=629;FS=3.396;HRun=9;HaplotypeScore=105.8749;InbreedingCoeff=0.7341;MQ=69.15;MQ0=0;MQRankSum=-0.426;QD=15.77;ReadPosRankSum=3.159;VQSLOD=3.0186;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:87.19:0,87,918	1/1:3,0:13:19.88:68,20,0	0/0:14,0:15:32.23:0,32,297	0/0:18,0:18:11.49:0,11,195	1/1:9,28:38:87.91:1204,88,0	1/1:3,16:20:48.16:722,48,0	1/1:1,15:16:36.12:548,36,0	1/1:7,29:37:81.67:1140,82,0	1/1:4,0:28:6.05:123,6,0	1/1:1,1:18:43.30:197,43,0	1/1:2,0:19:40.40:148,40,0	1/1:3,0:23:42.42:145,42,0	1/1:3,0:26:49.41:171,49,0	1/1:0,0:10:22.46:77,22,0	1/1:4,19:25:45.15:675,45,0	1/1:2,22:25:62.70:932,63,0	1/1:6,19:25:42.14:646,42,0	1/1:1,1:23:50.42:209,50,0	0/1:5,0:17:1.25:74,0,1	1/1:5,0:35:37.16:213,37,0	0/1:1,0:9:8.96:45,0,9	1/1:2,0:20:42.30:145,42,0	1/1:5,0:17:24.27:82,24,0	1/1:1,0:24:47.41:163,47,0	1/1:6,15:21:36.12:554,36,0	1/1:5,0:40:89.65:361,90,0	1/1:1,0:15:29.94:103,30,0	1/1:5,0:15:24.95:86,25,0
chr10	77679246	.	TGA	T	2098.04	PASS	AB=0.800;AC=15;AF=0.268;AN=56;BaseQRankSum=4.217;DP=378;FS=4.362;HRun=0;HaplotypeScore=92.5320;InbreedingCoeff=0.8758;MQ=72.75;MQ0=5;MQRankSum=-5.233;QD=22.56;ReadPosRankSum=-4.098;VQSLOD=3.0217;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.02:0,90,1502	0/0:8,0:8:24.07:0,24,338	0/0:26,0:15:44.94:0,45,757	0/0:31,0:24:53.89:0,54,1028	1/1:10,1:11:23.76:228,24,0	1/1:11,2:13:38.29:300,38,0	1/1:4,1:5:11.78:73,12,0	1/1:6,4:10:26.25:332,26,0	0/0:5,0:5:15.05:0,15,233	0/0:16,0:16:48.16:0,48,884	0/0:14,0:14:35.82:0,36,526	0/0:12,0:12:33.11:0,33,507	0/0:9,0:8:18.02:0,18,286	0/0:11,0:10:24.07:0,24,367	1/1:9,1:10:23.77:236,24,0	1/1:9,2:11:32.87:368,33,0	0/1:12,4:16:10.42:246,0,10	0/0:20,0:20:60.12:0,60,972	0/0:6,0:5:15.05:0,15,273	0/0:15,0:12:19.72:0,20,471	0/0:18,0:18:28.51:0,29,576	0/0:17,0:17:28.41:0,28,736	0/0:10,0:10:10.38:0,10,300	0/0:12,0:12:18.94:0,19,238	1/1:14,3:17:50.70:513,51,0	0/0:12,0:11:33.03:0,33,572	0/0:9,0:9:27.09:0,27,402	0/0:2,0:2:6.02:0,6,103
chr10	77679250	.	A	AACACACACACAC	13106.17	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=3.189;DP=542;FS=0.000;HRun=0;HaplotypeScore=247.8459;InbreedingCoeff=0.5476;MQ=60.63;MQ0=6;MQRankSum=-6.518;QD=29.25;ReadPosRankSum=-2.639;VQSLOD=3.2048;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:34:52.71:0,53,1594	1/1:11,0:11:9.02:312,9,0	0/0:25,0:14:6.02:0,6,138	0/0:34,0:26:20.85:0,21,505	1/1:22,0:20:5.62:151,6,0	1/1:22,0:22:14.16:319,14,0	1/1:13,0:13:6.49:148,6,0	1/1:21,0:17:26.45:860,26,0	1/1:11,1:14:27.09:1319,27,0	1/1:25,0:25:35.15:1330,35,0	1/1:16,0:16:8.93:137,9,0	1/1:19,2:22:21.07:1142,21,0	1/1:13,0:11:12.04:449,12,0	1/1:7,4:14:9.50:526,10,0	1/1:17,0:17:18.05:672,18,0	1/1:14,0:14:5.94:305,6,0	1/1:18,0:18:10.59:412,11,0	0/1:20,0:21:32.82:33,0,700	1/1:11,0:10:11.82:277,12,0	1/1:20,0:20:9.03:464,9,0	1/1:20,0:18:3.01:64,3,0	1/1:22,2:27:18.04:888,18,0	1/1:14,2:19:9.03:370,9,0	1/1:20,0:19:13.98:626,14,0	1/1:19,0:19:6.01:76,6,0	1/1:21,0:20:26.30:1010,26,0	1/1:20,0:20:22.51:912,23,0	1/1:4,0:4:6.02:306,6,0
chr10	77680721	.	GCACACGTA	G	7893.04	PASS	AB=0.553;AC=32;AF=0.571;AN=56;BaseQRankSum=12.269;DP=776;FS=0.826;HRun=0;HaplotypeScore=213.9103;InbreedingCoeff=0.8809;MQ=60.56;MQ0=11;MQRankSum=-7.080;QD=20.61;ReadPosRankSum=-1.154;VQSLOD=3.8082;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,105,3406	1/1:1,1:3:3.01:49,3,0	0/0:47,0:17:15.89:0,16,432	0/0:74,0:29:27.46:0,27,432	0/1:5,17:22:0:0,0,0	1/1:8,10:18:12.04:288,12,0	1/1:4,25:29:12.04:293,12,0	1/1:10,14:24:39.07:558,39,0	0/0:30,0:30:78.16:0,78,2643	1/1:7,15:22:48.12:966,48,0	0/1:3,16:19:0:0,0,0	0/0:34,0:34:90.14:0,90,3213	0/0:26,0:26:57.16:0,57,1887	0/0:31,0:31:81.17:0,81,2406	1/1:8,31:40:36.07:846,36,0	1/1:5,28:33:48.05:1173,48,0	1/1:12,7:19:29.93:498,30,0	0/0:25,0:25:54.15:0,54,1932	1/1:11,11:22:33:613,33,0	1/1:2,24:27:6.02:149,6,0	1/1:7,27:33:6.02:128,6,0	0/0:25,0:25:69.22:0,69,2506	0/0:13,0:13:27.05:0,27,1042	0/0:45,0:45:99:0,114,4097	1/1:2,18:20:12.04:293,12,0	1/1:1,18:19:54.16:1167,54,0	1/1:7,19:26:30.06:685,30,0	1/1:5,1:6:14.96:187,15,0
chr10	77680761	.	CCACACACACACACACA	C	940.39	PASS	AB=0.898;AC=14;AF=0.269;AN=52;BaseQRankSum=4.897;DP=701;FS=38.836;HRun=0;HaplotypeScore=289.8671;InbreedingCoeff=0.2770;MQ=45.60;MQ0=24;MQRankSum=-5.532;QD=3.79;ReadPosRankSum=-2.650;VQSLOD=1.2639;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:42.14:0,42,2227	0/0:4,0:6:8.39:0,8,107	./.	./.	0/0:15,2:17:0.47:0,0,1	1/1:13,4:16:2.96:20,3,0	1/1:32,0:32:5.55:68,6,0	0/1:29,0:27:4.81:83,0,5	0/0:26,0:26:27.55:0,28,1072	0/0:14,0:14:10.85:0,11,136	0/0:11,0:12:8.39:0,8,124	0/0:25,0:27:27.09:0,27,1432	0/0:17,0:19:30.10:0,30,1407	0/0:23,0:21:30.10:0,30,1466	1/1:30,4:35:2.90:19,3,0	0/1:25,5:33:19.48:195,0,19	1/1:14,8:21:9.03:368,9,0	0/1:17,0:22:99:130,0,165	0/0:17,0:16:17.54:0,18,296	0/0:25,0:27:6.02:0,6,123	0/0:46,0:43:18.06:0,18,449	0/0:21,0:22:24.08:0,24,1231	0/0:12,0:12:15.05:0,15,693	0/0:35,0:47:71.83:0,72,3300	0/1:16,1:17:19.64:146,0,20	0/1:16,0:16:16.45:16,0,173	0/1:20,0:21:45.01:45,0,168	0/0:4,0:8:18.06:0,18,371
chr10	77682483	.	T	TG	6780.03	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-7.932;DP=620;FS=2.831;HRun=4;HaplotypeScore=62.2507;InbreedingCoeff=0.9499;MQ=70.61;MQ0=0;MQRankSum=-0.241;QD=37.46;ReadPosRankSum=-0.949;VQSLOD=4.6064;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.18:0,90,979	1/1:0,11:11:33.11:451,33,0	0/0:7,0:7:0.13:0,0,143	0/0:9,0:9:8.36:0,8,124	0/0:19,0:19:57.13:0,57,618	0/0:21,0:21:63.16:0,63,704	0/0:29,0:29:81.19:0,81,891	0/0:34,0:34:90.24:0,90,1006	0/0:32,0:32:96.22:0,96,1063	1/1:3,20:23:60.20:819,60,0	1/1:0,11:11:30.10:410,30,0	0/0:29,0:29:84.21:0,84,933	0/0:29,0:29:84.22:0,84,943	0/0:31,0:31:90.26:0,90,1020	0/0:26,0:26:75.21:0,75,850	0/0:21,0:21:63.18:0,63,714	0/0:26,0:26:75.16:0,75,826	0/0:22,0:22:63.16:0,63,703	1/1:1,25:26:72.17:929,72,0	1/1:1,16:17:45.15:611,45,0	1/1:2,24:26:69.23:943,69,0	0/0:17,0:17:48.14:0,48,543	0/0:11,0:11:27.08:0,27,306	0/0:24,0:24:69.16:0,69,760	0/0:19,0:19:57.15:0,57,637	1/1:2,25:27:78.26:1058,78,0	1/1:1,25:26:75.25:1026,75,0	1/1:0,14:14:39.13:533,39,0
chr10	77683027	.	C	CCA	561.86	PASS	AB=0.874;AC=14;AF=0.280;AN=50;BaseQRankSum=-3.122;DP=538;FS=17.860;HRun=0;HaplotypeScore=89.8881;InbreedingCoeff=0.3100;MQ=63.28;MQ0=14;MQRankSum=0.469;QD=2.58;ReadPosRankSum=-1.884;VQSLOD=0.1314;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:40:13.61:161,0,14	0/0:6,0:7:2.51:0,3,14	./.	./.	1/1:27,0:27:8.97:71,9,0	1/1:29,0:28:11.37:109,11,0	0/1:20,7:28:22.11:79,0,22	1/1:18,0:17:3:28,3,0	0/0:12,0:13:17.86:0,18,164	0/1:10,0:10:0:1,0,0	./.	0/0:16,0:16:2.80:0,3,14	0/0:13,0:13:5.34:0,5,45	0/0:18,0:18:11.85:0,12,101	1/1:20,1:21:6.01:69,6,0	0/0:9,0:15:11.36:0,11,56	0/1:17,9:27:16.60:142,0,17	0/0:19,0:20:23.27:0,23,213	0/0:12,0:12:2.84:0,3,14	0/0:11,0:13:2.84:0,3,14	0/0:27,0:26:2.79:0,3,13	0/0:14,0:13:9.02:0,9,95	0/0:4,0:6:6.01:0,6,63	0/0:33,0:33:8.74:0,9,77	1/1:16,1:16:3.01:44,3,0	0/0:20,0:20:2.67:0,3,13	0/0:16,0:18:5.84:0,6,46	0/0:3,0:6:2.84:0,3,14
chr10	77683930	.	AAAAAG	A	2668.60	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=-5.649;DP=468;FS=2.696;HRun=0;HaplotypeScore=100.9766;InbreedingCoeff=0.4482;MQ=54.50;MQ0=7;MQRankSum=2.670;QD=13.02;ReadPosRankSum=-3.992;VQSLOD=1.8293;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:49.50:0,50,1139	1/1:1,4:5:14.93:201,15,0	0/0:28,0:10:16.66:0,17,272	0/0:17,0:7:16.35:0,16,219	0/1:26,0:25:30.42:30,0,441	0/1:11,0:11:29.86:30,0,175	0/0:23,0:23:4.91:0,5,547	0/0:35,0:33:2.61:0,3,595	0/0:11,0:10:24.80:0,25,315	1/1:4,15:18:38.77:415,39,0	1/1:0,12:11:20.54:162,21,0	0/1:15,0:14:22.93:23,0,312	0/0:18,0:17:17.03:0,17,491	0/0:15,0:15:9.53:0,10,542	0/1:16,0:16:3.35:3,0,302	0/0:22,0:22:6.32:0,6,355	0/0:24,0:24:14.25:0,14,428	0/0:17,0:15:7.62:0,8,433	1/1:4,15:17:44.32:424,44,0	1/1:11,4:15:29.77:384,30,0	1/1:0,10:10:5.99:62,6,0	0/1:9,0:9:59.07:59,0,82	0/0:13,0:13:26.11:0,26,360	0/1:9,0:9:20.72:21,0,113	0/0:17,0:16:3.25:0,3,266	1/1:9,6:15:13.72:454,14,0	1/1:3,14:17:26.88:488,27,0	1/1:2,5:5:6.02:109,6,0
chr10	77683934	.	AG	A	4688.92	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.932;DP=476;FS=18.398;HRun=1;HaplotypeScore=74.6631;InbreedingCoeff=0.8836;MQ=56.25;MQ0=5;MQRankSum=-4.095;QD=11.46;ReadPosRankSum=-1.092;VQSLOD=1.5942;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:33.25:0,33,427	1/1:5,0:5:14.46:79,14,0	0/0:28,0:10:12.90:0,13,155	0/0:18,0:9:21.90:0,22,180	1/1:26,0:25:44.33:292,44,0	1/1:10,1:11:25.62:187,26,0	1/1:21,0:22:45.37:278,45,0	1/1:28,5:31:55.34:389,55,0	1/1:14,0:13:22.01:145,22,0	1/1:18,0:17:35.11:234,35,0	1/1:12,0:11:20.40:122,20,0	1/1:17,0:16:29.05:207,29,0	1/1:19,1:19:41.67:278,42,0	1/1:18,0:18:19.37:105,19,0	1/1:16,0:16:21.38:113,21,0	1/1:22,1:23:37.91:282,38,0	1/1:23,0:23:32.49:208,32,0	1/1:15,1:15:20.86:135,21,0	1/1:18,0:16:34.77:240,35,0	1/1:16,0:16:38.15:255,38,0	1/1:10,0:10:4.52:24,5,0	1/1:10,0:10:26.67:222,27,0	1/1:15,0:15:24.79:157,25,0	1/1:10,0:10:12.44:80,12,0	1/1:18,1:18:23.46:159,23,0	1/1:17,0:17:35.76:328,36,0	1/1:15,0:15:25.77:138,26,0	1/1:5,0:5:5.75:30,6,0
chr10	77685162	.	GTCCCTC	G	16957.37	PASS	AB=0.533;AC=31;AF=0.554;AN=56;BaseQRankSum=19.804;DP=777;FS=0.288;HRun=0;HaplotypeScore=177.5270;InbreedingCoeff=0.8865;MQ=71.32;MQ0=0;MQRankSum=-19.366;QD=48.87;ReadPosRankSum=3.639;VQSLOD=4.8217;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,148,5017	0/1:1,7:8:87.18:328,0,87	0/0:38,0:37:94.20:0,94,2943	0/0:37,0:33:87.30:0,87,2888	0/0:25,0:25:72.25:0,72,2501	0/0:28,0:28:84.29:0,84,2909	0/0:32,0:32:93.32:0,93,3239	0/0:34,0:34:96.33:0,96,3235	1/1:3,22:25:48.16:1106,48,0	1/1:4,32:36:96.33:2112,96,0	1/1:3,21:24:54.19:1206,54,0	1/1:1,29:30:81.28:1866,81,0	1/1:3,22:25:63.22:1448,63,0	1/1:2,21:23:54.19:1241,54,0	0/0:39,0:39:99:0,114,3987	0/0:46,0:46:99:0,120,4136	0/0:30,0:30:84.27:0,84,2837	0/0:39,0:39:99:0,117,4055	1/1:4,15:19:48.13:945,48,0	1/1:1,20:21:48.16:1060,48,0	1/1:8,13:22:5.68:129,6,0	1/1:3,27:30:60.21:1350,60,0	1/1:3,20:23:51.17:1145,51,0	1/1:1,11:12:15.02:345,15,0	0/0:29,0:29:84.29:0,84,2764	1/1:2,21:23:63.22:1432,63,0	1/1:2,17:20:51.18:1175,51,0	1/1:0,6:6:3.01:69,3,0
chr10	77685587	.	TA	T	7421.67	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.256;DP=688;FS=4.129;HRun=1;HaplotypeScore=68.8855;InbreedingCoeff=0.9987;MQ=86.03;MQ0=0;MQRankSum=-3.050;QD=38.65;ReadPosRankSum=2.332;VQSLOD=5.6646;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,2087	1/1:0,17:17:51.17:712,51,0	0/0:23,0:23:69.21:0,69,999	0/0:21,0:21:57.10:0,57,768	0/0:26,0:26:78.22:0,78,1164	0/0:24,0:24:69.17:0,69,1050	0/0:15,0:15:45.14:0,45,681	0/0:22,0:22:66.18:0,66,914	0/0:22,0:22:66.21:0,66,1007	1/1:0,22:22:66.22:913,66,0	1/1:0,14:14:42.05:543,42,0	0/0:38,0:38:99:0,111,1665	0/0:25,0:25:75.23:0,75,1142	0/0:14,0:14:42.09:0,42,608	0/0:38,0:38:99:0,114,1714	0/0:20,0:20:60.20:0,60,938	0/0:44,0:44:99:0,132,2012	0/0:23,0:23:69.16:0,69,1026	1/1:0,14:14:42.12:558,42,0	1/1:0,29:29:87.18:1151,87,0	1/1:0,29:29:81.27:1132,81,0	0/0:26,0:26:75.21:0,75,1125	0/0:18,0:18:54.18:0,54,833	0/0:31,0:31:93.27:0,93,1402	0/0:20,0:20:60.20:0,60,938	1/1:0,33:33:96.23:1280,96,0	1/1:1,27:28:63.21:881,63,0	1/1:0,6:6:18.06:251,18,0
chr10	77685828	.	AAGGG	A	6530.23	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=4.207;DP=519;FS=4.977;HRun=0;HaplotypeScore=109.1908;InbreedingCoeff=0.9522;MQ=61.81;MQ0=3;MQRankSum=-4.562;QD=36.69;ReadPosRankSum=0.729;VQSLOD=5.0138;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:39.12:0,39,924	1/1:2,4:6:15.01:215,15,0	0/0:24,0:16:2.29:0,2,420	0/0:30,0:22:27.44:0,27,638	0/0:17,0:17:45.15:0,45,1055	0/0:16,0:16:33.11:0,33,796	0/0:17,0:17:30.09:0,30,698	0/0:15,0:15:21.05:0,21,409	0/0:14,0:14:33.11:0,33,824	1/1:6,7:13:27.09:453,27,0	1/1:4,10:14:30.10:495,30,0	0/0:20,0:20:36.01:0,36,897	0/0:17,0:17:42.13:0,42,995	0/0:18,0:18:42.14:0,42,1047	0/0:26,0:26:51.18:0,51,1238	0/0:16,0:16:45.15:0,45,1092	0/0:17,0:16:36.07:0,36,745	0/0:13,0:13:30.10:0,30,735	1/1:8,15:23:48.16:795,48,0	1/1:7,16:23:51.13:828,51,0	1/1:12,15:27:39.13:651,39,0	0/0:18,0:18:42.13:0,42,998	0/0:13,0:13:24.08:0,24,597	0/0:13,0:12:6.91:0,7,152	0/0:14,0:14:30.10:0,30,749	1/1:7,24:31:81.28:1367,81,0	1/1:7,18:25:60.21:1016,60,0	1/1:2,14:16:42.14:713,42,0
chr10	77685875	.	GGA	G	9592.35	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=0.692;DP=532;FS=5.769;HRun=0;HaplotypeScore=97.0282;InbreedingCoeff=0.9535;MQ=73.53;MQ0=15;MQRankSum=-2.075;QD=23.57;ReadPosRankSum=4.831;VQSLOD=5.3573;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:31:41.07:0,41,1158	1/1:1,8:8:15.05:186,15,0	0/0:49,0:18:10.41:0,10,306	0/0:44,1:27:32.96:0,33,391	1/1:3,12:14:30.09:372,30,0	1/1:1,9:9:24.08:298,24,0	1/1:3,12:15:33.10:409,33,0	1/1:3,10:12:30.09:370,30,0	1/1:2,13:15:36.11:446,36,0	1/1:4,9:13:24.07:298,24,0	1/1:4,11:17:32.77:362,33,0	1/1:3,8:11:18.06:223,18,0	1/1:3,12:15:36.11:446,36,0	1/1:2,13:14:30.09:372,30,0	1/1:4,21:25:54.17:669,54,0	1/1:6,11:16:27.08:335,27,0	1/1:2,11:13:27.08:335,27,0	1/1:2,10:12:24.08:297,24,0	1/1:14,8:22:15.91:286,16,0	1/1:3,15:18:39.11:467,39,0	1/1:14,19:29:39.59:484,40,0	1/1:5,16:21:44.59:557,45,0	1/1:2,8:10:18.06:223,18,0	1/1:2,4:6:12.02:149,12,0	1/1:3,13:16:33.10:409,33,0	1/1:12,19:29:54.17:669,54,0	1/1:4,17:21:48.15:595,48,0	1/1:5,9:14:27.08:335,27,0
chr10	77686359	.	AG	A	15258.93	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=5.159;DP=592;FS=0.966;HRun=5;HaplotypeScore=79.7522;InbreedingCoeff=0.9989;MQ=90.13;MQ0=0;MQRankSum=-7.508;QD=29.57;ReadPosRankSum=4.791;VQSLOD=5.2165;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.27:0,87,1171	1/1:1,11:12:27.08:306,27,0	0/0:23,0:23:66.20:0,66,859	0/0:24,0:23:57.33:0,57,872	1/1:3,22:25:60.17:681,60,0	1/1:0,26:26:78.22:885,78,0	1/1:2,26:28:66.19:749,66,0	1/1:1,29:30:87.20:963,87,0	1/1:3,18:21:51.14:578,51,0	1/1:1,20:21:57.16:646,57,0	1/1:0,15:15:39.11:442,39,0	1/1:0,17:17:48.14:545,48,0	1/1:0,20:20:48.14:544,48,0	1/1:1,22:23:57.16:647,57,0	1/1:3,26:29:78.22:885,78,0	1/1:0,21:21:60.17:681,60,0	1/1:0,31:31:72.21:817,72,0	1/1:2,17:19:39.11:442,39,0	1/1:1,15:16:45.13:510,45,0	1/1:0,12:12:30.04:326,30,0	1/1:2,25:27:75.21:851,75,0	1/1:2,16:18:51.09:563,51,0	1/1:0,10:10:27.08:306,27,0	1/1:0,16:16:45.13:511,45,0	1/1:2,14:16:33.09:374,33,0	1/1:1,16:17:48.14:544,48,0	1/1:0,29:29:87.25:987,87,0	1/1:1,16:17:42.12:476,42,0
chr10	77686889	.	GA	G	1379.58	PASS	AB=0.857;AC=37;AF=0.925;AN=40;BaseQRankSum=-3.738;DP=72;FS=24.717;HRun=1;HaplotypeScore=23.3606;InbreedingCoeff=0.1212;MQ=107.07;MQ0=0;MQRankSum=-3.795;QD=22.62;ReadPosRankSum=-0.329;VQSLOD=1.8322;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:5.94:41,6,0	./.	0/0:7,0:7:8.04:0,8,100	0/1:5,1:5:12.01:12,0,32	1/1:0,1:1:2.94:18,3,0	./.	1/1:0,9:9:21.01:232,21,0	1/1:0,3:3:9.03:125,9,0	1/1:0,1:1:3.01:39,3,0	1/1:0,1:1:3.01:42,3,0	./.	1/1:0,2:2:3.01:38,3,0	1/1:0,1:1:3.01:39,3,0	./.	1/1:0,3:3:9:99,9,0	./.	1/1:0,9:9:20.94:233,21,0	1/1:0,4:4:8.94:90,9,0	./.	./.	1/1:0,5:5:8.94:93,9,0	./.	1/1:1,0:1:3.01:36,3,0	1/1:0,2:2:6.01:67,6,0	1/1:0,4:4:3.01:38,3,0	1/1:0,4:4:12.04:158,12,0	1/1:0,1:1:3.01:42,3,0	1/1:0,1:1:3.01:42,3,0
chr10	77687233	.	G	GGGC	34.44	PASS	AB=0.813;AC=3;AF=0.088;AN=34;BaseQRankSum=1.990;DP=67;FS=0.000;HRun=0;HaplotypeScore=23.2729;InbreedingCoeff=-0.1943;MQ=59.12;MQ0=0;MQRankSum=-1.150;QD=1.50;ReadPosRankSum=-1.041;VQSLOD=0.2376;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:4,2:6:92.46:92,0,119	./.	0/0:1,0:1:2.68:0,3,11	0/0:2,0:1:2.99:0,3,23	./.	0/0:1,0:1:3.01:0,3,51	0/0:5,0:5:15.01:0,15,177	0/0:5,0:5:14.69:0,15,141	0/0:2,0:2:3.01:0,3,46	./.	./.	./.	./.	0/0:1,0:1:2.90:0,3,16	./.	0/0:2,0:2:5.75:0,6,47	0/0:4,0:4:12.03:0,12,174	0/0:2,0:2:3.01:0,3,38	0/1:4,1:5:11.83:12,0,98	./.	0/1:10,2:12:17.44:17,0,197	0/0:2,0:2:2.99:0,3,24	0/0:2,0:2:6.02:0,6,88	0/0:11,0:11:15:0,15,177	./.	0/0:2,0:2:6.02:0,6,93	./.	./.
chr10	77688324	.	AT	A	2061.79	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=8.491;DP=390;FS=0.472;HRun=8;HaplotypeScore=40.3268;InbreedingCoeff=0.9410;MQ=93.72;MQ0=0;MQRankSum=-1.351;QD=19.09;ReadPosRankSum=3.867;VQSLOD=3.0329;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.68:0,70,833	0/0:3,0:3:9.03:0,9,109	0/0:21,0:21:45.96:0,46,457	0/0:16,0:16:21.78:0,22,277	0/0:5,0:5:15.05:0,15,181	0/0:6,0:6:15.05:0,15,181	0/0:16,0:16:30.01:0,30,343	0/0:19,0:19:42.09:0,42,490	1/1:1,12:13:33.05:319,33,0	0/0:9,0:9:27.08:0,27,326	0/0:5,0:5:15.05:0,15,181	1/1:2,15:17:36.05:347,36,0	1/1:1,11:12:3.47:234,3,0	1/1:4,7:11:21.03:203,21,0	0/0:14,0:14:39.11:0,39,460	0/0:11,0:11:33.09:0,33,388	0/0:38,2:40:56.40:0,56,1244	1/1:3,15:18:39.06:377,39,0	0/0:16,0:16:41.68:0,42,468	0/0:7,0:7:18.05:0,18,208	0/0:23,0:23:69.21:0,69,833	1/1:0,12:12:33.05:319,33,0	1/1:0,5:5:9.01:87,9,0	1/1:3,17:20:39.06:377,39,0	0/0:10,0:10:27.08:0,27,326	0/0:18,0:18:48.15:0,48,580	0/0:7,0:7:21.06:0,21,253	0/0:10,0:10:30.09:0,30,362
chr10	77688458	.	TG	T	5953.67	PASS	AB=0.933;AC=31;AF=0.554;AN=56;BaseQRankSum=10.638;DP=430;FS=8.674;HRun=1;HaplotypeScore=74.3602;InbreedingCoeff=0.8989;MQ=81.21;MQ0=0;MQRankSum=-2.983;QD=25.23;ReadPosRankSum=2.644;VQSLOD=4.1433;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1629	0/0:9,0:9:21.07:0,21,324	0/0:23,0:23:61.38:0,61,696	0/0:13,0:12:19.03:0,19,297	1/1:0,5:5:6.02:75,6,0	1/1:0,14:14:33.08:404,33,0	1/1:5,19:24:59.72:772,60,0	1/1:3,4:7:17.96:189,18,0	1/1:1,11:12:21.07:270,21,0	0/0:20,0:20:57.19:0,57,906	0/0:10,0:10:24.08:0,24,365	1/1:5,9:14:35.97:404,36,0	1/1:2,16:18:32.88:398,33,0	1/1:2,13:15:29.90:334,30,0	1/1:1,18:19:54.17:686,54,0	1/1:1,11:12:28.80:384,29,0	1/1:0,25:25:63.20:807,63,0	0/1:25,2:28:99:109,0,116	0/0:14,0:14:42.12:0,42,616	0/0:4,0:4:12.04:0,12,179	0/0:21,0:21:57.18:0,57,885	1/1:0,9:9:14.97:157,15,0	1/1:0,9:9:18.53:232,19,0	1/1:0,16:16:39.13:502,39,0	1/1:0,9:9:18.06:232,18,0	0/0:22,0:22:63.20:0,63,943	0/0:15,0:15:39.13:0,39,618	0/0:5,0:5:15.05:0,15,225
chr10	77688805	.	A	AC	781.26	PASS	AB=0.839;AC=17;AF=0.304;AN=56;BaseQRankSum=-2.323;DP=318;FS=29.396;HRun=9;HaplotypeScore=45.3420;InbreedingCoeff=0.4119;MQ=81.86;MQ0=0;MQRankSum=-0.018;QD=7.74;ReadPosRankSum=-0.709;VQSLOD=-0.2219;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:44.96:0,45,388	0/1:1,3:4:20.04:27,0,20	0/1:8,0:8:4.09:4,0,61	0/1:10,0:11:3.42:3,0,59	0/0:8,0:8:20.98:0,21,179	0/0:9,0:9:23.98:0,24,204	0/0:20,0:22:49:0,49,397	0/0:7,0:7:14.99:0,15,130	0/0:13,0:13:29.98:0,30,260	0/1:2,0:2:0:0,0,0	0/1:2,0:2:0:0,0,0	0/0:11,0:11:29.98:0,30,260	0/0:10,0:10:26.98:0,27,234	0/0:15,0:15:35.99:0,36,312	0/0:14,0:15:32.01:0,32,266	0/0:12,0:12:32.96:0,33,281	0/0:27,0:27:71.98:0,72,624	1/1:3,13:16:1.02:239,1,0	0/1:6,3:9:14.05:76,0,14	1/1:0,2:2:6.02:66,6,0	1/1:13,19:32:10.04:339,10,0	0/0:5,0:5:9:0,9,77	0/0:8,0:8:20.99:0,21,180	0/0:23,0:23:59.97:0,60,516	0/0:12,0:12:17.99:0,18,156	1/1:2,0:2:3:26,3,0	0/1:2,9:11:11.42:118,0,11	1/1:1,1:2:3.01:33,3,0
chr10	77689086	.	C	CCA	4013.98	PASS	AB=0.597;AC=14;AF=0.259;AN=54;BaseQRankSum=-9.196;DP=445;FS=11.094;HRun=0;HaplotypeScore=62.8257;InbreedingCoeff=0.6955;MQ=73.97;MQ0=0;MQRankSum=0.075;QD=29.30;ReadPosRankSum=0.574;VQSLOD=4.3073;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:78.23:0,78,962	./.	0/0:26,0:26:2.64:0,3,330	0/0:17,0:17:35.27:0,35,361	1/1:1,3:5:2.97:20,3,0	1/1:3,17:20:4.88:569,5,0	1/1:5,25:31:57.19:941,57,0	1/1:7,14:20:39.10:597,39,0	0/0:12,0:12:33.10:0,33,412	0/0:6,0:6:15.05:0,15,188	0/0:8,0:9:26.92:0,27,314	0/0:18,0:18:42.12:0,42,512	0/0:18,0:18:51.16:0,51,637	0/0:17,0:17:36.11:0,36,450	1/1:4,14:18:36.12:592,36,0	0/1:4,6:10:50.99:272,0,51	0/1:6,19:25:46.38:875,0,46	0/0:22,0:22:60.19:0,60,751	0/0:14,0:14:33.09:0,33,402	0/0:15,0:15:39.12:0,39,486	0/0:23,0:23:45.07:0,45,628	0/0:6,0:6:15.05:0,15,187	0/0:13,0:13:36.11:0,36,449	0/0:18,0:20:53.83:0,54,628	1/1:2,5:7:9.03:148,9,0	0/0:14,0:14:30.05:0,30,347	0/0:13,0:13:21.07:0,21,263	0/0:12,0:12:36.12:0,36,450
chr10	77689617	.	C	CTT	9466.75	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-11.316;DP=478;FS=10.128;HRun=9;HaplotypeScore=53.6245;InbreedingCoeff=0.9624;MQ=74.22;MQ0=2;MQRankSum=1.320;QD=30.54;ReadPosRankSum=1.957;VQSLOD=4.0206;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.10:0,42,447	0/0:6,0:6:15.03:0,15,160	0/0:15,0:15:23.59:0,24,276	0/0:11,0:11:7.58:0,8,92	1/1:4,15:21:42.14:629,42,0	1/1:1,20:21:51.17:785,51,0	1/1:2,14:16:33.11:508,33,0	1/1:6,17:26:54.11:761,54,0	1/1:2,15:17:39.13:600,39,0	0/0:15,0:15:45.11:0,45,479	0/0:14,0:14:33.06:0,33,351	1/1:3,12:16:36.12:537,36,0	1/1:3,10:13:18.06:277,18,0	1/1:4,11:16:4.15:450,4,0	1/1:3,19:22:48.16:739,48,0	1/1:4,11:17:32.59:453,33,0	1/1:5,19:26:56.68:824,57,0	1/1:2,23:25:48.16:739,48,0	0/0:24,0:24:51.09:0,51,543	0/0:13,0:13:27.02:0,27,287	0/0:6,0:6:18.05:0,18,192	1/1:1,12:14:36.12:554,36,0	1/1:4,12:15:24.08:351,24,0	1/1:2,23:26:22.25:753,22,0	1/1:1,16:17:33.11:508,33,0	0/0:14,0:14:30.02:0,30,319	0/0:27,0:27:75.17:0,75,798	0/0:8,0:8:21.04:0,21,223
chr10	77691511	.	TC	T	74.96	PASS	AB=0.923;AC=9;AF=0.250;AN=36;BaseQRankSum=-2.339;DP=91;FS=6.429;HRun=12;HaplotypeScore=21.9938;InbreedingCoeff=0.3760;MQ=99.71;MQ0=1;MQRankSum=-2.826;QD=4.16;ReadPosRankSum=1.366;VQSLOD=-0.6305;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,1:7:3.47:0,3,29	./.	0/0:20,0:5:10.46:0,10,77	0/0:8,0:6:3.53:0,4,17	./.	./.	0/0:5,0:5:0.76:0,1,3	0/0:1,1:2:0:0,0,0	0/0:1,0:1:0:0,0,0	1/1:0,1:1:2.99:23,3,0	./.	./.	0/0:1,0:1:2.98:0,3,22	0/0:5,0:5:5.22:0,5,32	./.	1/1:1,0:1:1.25:3,1,0	0/1:11,1:12:3.99:96,0,4	0/0:6,0:6:9.79:0,10,65	0/0:2,0:2:0:0,0,0	./.	0/0:6,0:6:0:0,0,0	./.	./.	0/0:7,0:7:11.23:0,11,93	0/0:2,0:2:0:0,0,0	./.	1/1:0,1:1:2.99:23,3,0	1/1:2,1:3:4.23:26,4,0
chr10	77691882	.	TC	T	1601.55	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=0.818;DP=396;FS=4.046;HRun=6;HaplotypeScore=58.4709;InbreedingCoeff=0.8699;MQ=67.22;MQ0=10;MQRankSum=0.043;QD=16.86;ReadPosRankSum=-0.227;VQSLOD=3.2492;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:63.17:0,63,791	0/0:3,0:3:9.03:0,9,115	0/0:23,0:11:30.06:0,30,373	0/0:26,0:18:35.26:0,35,466	1/1:0,6:6:12.03:129,12,0	1/1:4,9:11:24.06:253,24,0	1/1:7,16:21:32.94:326,33,0	1/1:5,3:8:9:88,9,0	0/0:27,0:27:75.08:0,75,915	0/0:15,0:14:39.13:0,39,511	0/0:2,0:2:6.02:0,6,79	0/0:10,0:10:27.08:0,27,337	0/0:13,0:12:30.07:0,30,363	0/0:23,0:23:45.07:0,45,533	1/1:2,14:16:40.27:401,40,0	1/1:1,3:3:6.49:65,6,0	1/1:5,20:24:51.10:525,51,0	0/0:14,0:14:35.95:0,36,448	0/0:10,0:9:24.05:0,24,287	0/0:1,0:1:3.01:0,3,39	0/0:39,0:36:83.22:0,83,1074	0/0:9,0:8:21.07:0,21,272	0/0:4,0:4:12.03:0,12,136	0/0:33,0:33:84.73:0,85,1050	./.	0/0:14,0:14:33.10:0,33,416	0/0:3,0:3:6.02:0,6,79	0/0:4,0:4:9.03:0,9,115
chr10	77691889	.	AACAC	A	1067.35	PASS	AB=0.956;AC=14;AF=0.318;AN=44;BaseQRankSum=3.606;DP=414;FS=0.000;HRun=0;HaplotypeScore=85.6551;InbreedingCoeff=0.5668;MQ=61.37;MQ0=13;MQRankSum=-3.267;QD=6.98;ReadPosRankSum=1.727;VQSLOD=2.0548;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:19.58:0,20,243	0/0:3,0:3:3.01:0,3,52	./.	0/0:22,0:14:0:0,0,0	./.	0/0:12,0:12:14.24:0,14,194	0/1:23,0:22:5.85:6,0,239	0/0:7,0:7:6.02:0,6,78	1/1:22,4:26:24.07:347,24,0	0/0:15,0:14:15.01:0,15,250	0/0:2,0:2:3.01:0,3,49	1/1:11,1:12:6.01:75,6,0	1/1:9,3:11:6.02:92,6,0	1/1:14,7:22:12.03:148,12,0	0/1:17,1:19:26.81:27,0,185	0/0:7,0:6:9.03:0,9,203	0/0:26,0:30:36.02:0,36,539	0/0:17,0:17:24.07:0,24,415	0/0:11,0:12:6.46:0,6,51	./.	0/0:42,0:38:30.55:0,31,494	./.	1/1:2,3:5:6.02:92,6,0	1/1:23,8:31:30.01:433,30,0	./.	0/0:16,0:16:30.09:0,30,531	0/0:3,0:3:2.99:0,3,24	./.
chr10	77692201	.	AGT	A	149.13	PASS	AB=0.977;AC=6;AF=0.188;AN=32;BaseQRankSum=1.885;DP=408;FS=12.794;HRun=0;HaplotypeScore=55.8474;InbreedingCoeff=0.1337;MQ=70.88;MQ0=16;MQRankSum=0.246;QD=1.27;ReadPosRankSum=1.320;VQSLOD=0.1600;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,17:34:14.70:123,15,0	0/0:4,0:4:6.02:0,6,76	./.	./.	./.	./.	./.	./.	0/1:12,0:10:0:0,0,0	0/0:20,0:19:5.93:0,6,61	0/0:5,0:4:3.01:0,3,43	0/0:12,0:11:3:0,3,25	0/0:11,0:11:0:0,0,0	./.	./.	./.	0/1:21,0:21:10.88:11,0,17	0/1:37,0:37:52.98:63,0,53	0/0:13,0:12:6.02:0,6,87	0/0:7,0:7:0.47:0,0,1	0/0:57,0:54:12.74:0,13,478	./.	0/0:5,0:5:3:0,3,25	./.	0/0:3,0:3:0:0,0,0	0/0:15,0:15:6.01:0,6,71	0/1:9,0:10:48.91:49,0,82	./.
chr10	77692856	.	TG	T	13110.61	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=13.447;DP=711;FS=3.663;HRun=4;HaplotypeScore=70.1247;InbreedingCoeff=1.0000;MQ=82.81;MQ0=0;MQRankSum=-1.912;QD=32.45;ReadPosRankSum=2.986;VQSLOD=5.6493;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.32:0,96,1344	0/0:17,0:17:48.14:0,48,653	0/0:20,0:20:48.16:0,48,671	0/0:19,0:19:42.32:0,42,575	1/1:1,29:30:75.23:900,75,0	1/1:0,24:24:66.20:792,66,0	1/1:2,28:30:72.22:864,72,0	1/1:3,25:28:75.21:878,75,0	1/1:2,19:21:48.15:576,48,0	0/0:38,0:38:99:0,105,1441	0/0:14,0:14:36.12:0,36,503	1/1:4,18:22:60.18:720,60,0	1/1:0,23:23:63.19:755,63,0	1/1:1,28:29:84.26:1006,84,0	1/1:0,26:26:75.23:900,75,0	1/1:0,26:26:78.24:936,78,0	1/1:2,28:30:75.23:900,75,0	1/1:2,18:20:54.17:648,54,0	0/0:22,0:22:63.15:0,63,833	0/0:21,0:21:60.18:0,60,807	0/0:40,0:40:99:0,114,1592	1/1:0,21:21:60.18:718,60,0	1/1:0,23:23:69.21:828,69,0	1/1:0,23:23:66.20:792,66,0	1/1:1,27:28:75.23:899,75,0	0/0:33,0:33:96.31:0,96,1328	0/0:31,0:31:90.30:0,90,1254	0/0:19,0:19:57.19:0,57,797
chr10	77692954	.	CA	C	16007.97	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=12.921;DP=701;FS=3.167;HRun=1;HaplotypeScore=73.3689;InbreedingCoeff=0.9994;MQ=85.97;MQ0=0;MQRankSum=-3.048;QD=39.04;ReadPosRankSum=4.864;VQSLOD=5.4643;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1812	0/0:7,0:7:21.07:0,21,336	0/0:29,0:29:78.09:0,78,1193	0/0:20,0:20:60.19:0,60,926	1/1:0,19:19:54.18:755,54,0	1/1:0,18:18:48.16:671,48,0	1/1:0,24:24:69.23:965,69,0	1/1:0,29:27:81.24:1093,81,0	1/1:0,29:29:87.29:1217,87,0	0/0:36,0:36:99:0,108,1696	0/0:15,0:15:45.15:0,45,719	1/1:0,31:31:78.09:1090,78,0	1/1:1,18:19:48.16:660,48,0	1/1:3,24:27:81.27:1128,81,0	1/1:0,27:27:78.26:1091,78,0	1/1:0,27:27:75.25:1049,75,0	1/1:0,32:32:96.32:1343,96,0	1/1:0,22:22:60.20:839,60,0	0/0:21,0:21:56.75:0,57,885	0/0:19,0:19:57.18:0,57,888	0/0:49,0:49:99:0,147,2326	1/1:1,27:28:81.27:1129,81,0	1/1:0,20:20:54.18:756,54,0	1/1:0,39:39:99:1551,111,0	1/1:0,19:19:48.16:671,48,0	0/0:27,0:27:75.26:0,75,1197	0/0:20,0:20:60.20:0,60,946	0/0:10,0:10:30.08:0,30,454
chr10	77693701	.	C	CT	6362.48	PASS	AB=0.560;AC=26;AF=0.464;AN=56;BaseQRankSum=-3.977;DP=562;FS=8.414;HRun=9;HaplotypeScore=66.3792;InbreedingCoeff=0.7377;MQ=76.96;MQ0=1;MQRankSum=-0.842;QD=21.49;ReadPosRankSum=0.572;VQSLOD=5.3983;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:89.98:0,90,781	0/0:6,0:6:14.99:0,15,130	0/0:25,0:19:14.85:0,15,182	0/0:16,0:15:8.98:0,9,78	1/1:6,15:21:10.10:339,10,0	1/1:3,13:16:42.06:450,42,0	1/1:4,18:22:48.13:531,48,0	1/1:5,21:26:60.16:664,60,0	1/1:3,21:24:45.12:498,45,0	0/0:24,0:24:62.98:0,63,547	0/0:19,0:19:47.99:0,48,416	1/1:3,18:21:22.07:472,22,0	1/1:3,16:19:9.40:308,9,0	0/1:4,13:17:10.01:347,0,10	1/1:5,17:22:45.12:498,45,0	1/1:2,14:16:39.10:424,39,0	0/1:5,25:31:0.94:428,0,1	0/0:22,0:23:64.99:0,65,548	0/0:28,0:28:77.96:0,78,672	0/0:11,0:11:29.99:0,30,260	0/0:13,0:13:29.98:0,30,260	1/1:2,11:13:27.07:299,27,0	0/1:4,15:19:13.01:326,0,13	1/1:2,19:21:57.15:631,57,0	0/1:2,6:8:8.01:148,0,8	0/0:29,0:29:80.98:0,81,703	0/0:28,0:28:74.02:0,74,631	0/0:9,0:9:20.99:0,21,182
chr10	77694038	.	C	CT	11750.49	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-15.278;DP=653;FS=7.714;HRun=7;HaplotypeScore=63.0955;InbreedingCoeff=0.9989;MQ=75.27;MQ0=0;MQRankSum=-1.281;QD=30.52;ReadPosRankSum=1.672;VQSLOD=5.2413;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,126,1217	0/0:8,0:8:24.04:0,24,232	0/0:11,0:11:21.76:0,22,175	0/0:15,0:15:32.14:0,32,262	1/1:3,19:22:60.14:704,60,0	1/1:1,20:21:54.17:652,54,0	1/1:2,26:28:75.23:906,75,0	1/1:11,27:38:75.20:890,75,0	1/1:1,20:21:57.17:689,57,0	0/0:27,0:27:63.09:0,63,605	0/0:27,0:27:72.11:0,72,695	1/1:1,24:25:72.22:870,72,0	1/1:3,16:19:51.16:615,51,0	1/1:1,16:17:39.12:471,39,0	1/1:2,29:31:78.24:942,78,0	1/1:1,22:23:37.33:732,37,0	1/1:2,34:36:99:1196,99,0	1/1:5,23:28:63.19:761,63,0	0/0:21,0:21:50.42:0,50,491	0/0:22,0:22:60.09:0,60,579	0/0:25,0:25:63.08:0,63,604	1/1:1,20:21:57.17:689,57,0	1/1:0,24:24:64.97:765,65,0	1/1:2,17:19:48.15:580,48,0	1/1:4,8:12:24.07:290,24,0	0/0:24,0:24:60.08:0,60,576	0/0:26,0:26:75.12:0,75,724	0/0:16,0:16:45.07:0,45,434
chr10	77695443	.	ATGTG	A	329.63	PASS	AC=16;AF=0.381;AN=42;BaseQRankSum=5.013;DP=199;FS=9.750;HRun=0;HaplotypeScore=41.8838;InbreedingCoeff=0.7034;MQ=88.33;MQ0=5;MQRankSum=-0.938;QD=6.22;ReadPosRankSum=-0.757;VQSLOD=0.1942;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:9:23.71:0,24,354	0/0:1,0:1:3.01:0,3,48	0/0:12,0:11:15.04:0,15,267	0/0:17,0:14:23.93:0,24,388	./.	1/1:5,0:6:6.01:71,6,0	1/1:5,0:3:2.99:24,3,0	1/1:7,6:13:18.03:223,18,0	./.	0/0:8,0:8:21.07:0,21,380	0/0:11,0:11:24.08:0,24,378	1/1:5,0:5:5.93:50,6,0	./.	1/1:3,0:3:0.94:2,1,0	./.	./.	1/1:13,0:11:7.79:76,8,0	0/0:8,0:8:13.07:0,13,163	0/0:8,0:7:12.04:0,12,204	0/0:7,0:7:15.02:0,15,213	0/0:9,0:9:6:0,6,72	./.	1/1:5,0:5:0.47:1,0,0	./.	1/1:3,0:3:2.99:23,3,0	0/0:8,0:8:18.06:0,18,312	0/0:5,0:5:12.04:0,12,190	0/0:10,0:10:11.56:0,12,253
chr10	77695487	.	A	ATGTGTGTG	175.92	PASS	AB=1.000;AC=7;AF=0.233;AN=30;BaseQRankSum=-0.597;DP=113;FS=2.476;HRun=0;HaplotypeScore=33.2365;InbreedingCoeff=0.2438;MQ=36.33;MQ0=23;MQRankSum=-2.328;QD=7.65;ReadPosRankSum=-1.669;VQSLOD=0.3729;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:8:18.03:0,18,324	0/1:1,0:1:0:0,0,0	./.	./.	./.	./.	1/1:4,0:1:3.01:46,3,0	0/1:12,0:7:37.87:148,0,38	0/0:4,0:2:6.02:0,6,112	./.	./.	./.	0/0:4,0:3:5.45:0,5,49	./.	./.	1/1:2,0:2:3.01:72,3,0	0/0:9,3:10:5.44:0,5,45	0/0:16,0:15:29.98:0,30,530	./.	0/0:3,0:2:3:0,3,26	0/1:4,0:3:0:0,0,0	./.	0/0:3,0:3:3.01:0,3,43	./.	./.	0/0:3,0:1:3.01:0,3,54	0/0:4,0:3:3:0,3,25	0/0:3,0:2:3.01:0,3,51
chr10	77696104	.	A	AC	1537.31	PASS	AB=0.929;AC=26;AF=0.464;AN=56;BaseQRankSum=6.433;DP=490;FS=27.843;HRun=0;HaplotypeScore=117.0383;InbreedingCoeff=0.6115;MQ=83.54;MQ0=4;MQRankSum=-5.390;QD=9.37;ReadPosRankSum=-3.821;VQSLOD=1.5132;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:32:72.12:0,72,886	0/0:8,0:9:20.81:0,21,210	0/0:73,0:43:94.77:0,95,921	0/0:66,0:38:67.89:0,68,562	1/1:6,1:7:11.95:95,12,0	1/1:10,3:13:23.50:186,24,0	1/1:10,6:16:29.78:240,30,0	1/1:9,0:9:3.07:102,3,0	0/1:4,0:4:10.55:26,0,11	0/0:21,0:21:51.16:0,51,679	0/0:7,0:8:6.72:0,7,106	1/1:17,0:17:12.86:165,13,0	0/1:16,0:16:2.86:103,0,3	1/1:2,0:10:4.19:29,4,0	0/1:6,3:10:5.36:23,0,5	1/1:8,6:14:38.32:299,38,0	1/1:16,5:21:29.80:264,30,0	0/0:4,1:18:5.41:0,5,24	0/0:14,0:14:39.12:0,39,525	0/0:11,0:11:27.07:0,27,339	0/0:25,0:25:54.12:0,54,677	1/1:5,0:5:2.73:21,3,0	1/1:1,0:1:3:25,3,0	0/1:10,0:10:4.22:68,0,4	1/1:10,1:11:0.33:87,0,0	0/0:25,0:26:72.16:0,72,872	0/0:13,0:13:38.76:0,39,458	0/0:8,0:8:15.03:0,15,184
chr10	77696111	.	G	GC	498.43	PASS	AB=0.810;AC=12;AF=0.222;AN=54;BaseQRankSum=7.517;DP=480;FS=15.384;HRun=0;HaplotypeScore=93.8941;InbreedingCoeff=0.5114;MQ=85.01;MQ0=4;MQRankSum=-5.853;QD=4.75;ReadPosRankSum=1.292;VQSLOD=2.4612;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,1133	0/0:9,0:9:26.84:0,27,290	0/0:69,0:41:83.27:0,83,913	0/0:62,0:36:56.83:0,57,577	0/1:7,0:8:8.02:29,0,8	0/1:7,0:10:16.27:91,0,16	1/1:5,13:24:17.08:136,17,0	0/1:6,0:6:12.63:14,0,13	0/0:2,0:2:5.92:0,6,39	0/0:25,0:25:75.12:0,75,903	0/0:11,0:11:14.80:0,15,178	0/0:14,0:14:29.28:0,29,208	0/0:13,0:13:24.24:0,24,167	0/0:9,0:9:14.12:0,14,95	1/1:8,0:9:17.42:89,17,0	0/1:6,0:21:72.96:73,0,74	1/1:6,6:17:1.04:124,1,0	0/0:14,0:13:23.30:0,23,164	0/0:13,0:13:39.12:0,39,529	0/0:11,0:11:33.08:0,33,401	0/0:24,0:24:63.15:0,63,782	0/0:7,0:7:16.79:0,17,132	./.	0/0:10,0:10:20.57:0,21,159	1/1:9,0:10:20.15:105,20,0	0/0:23,0:23:62.14:0,62,759	0/0:13,0:13:36.04:0,36,445	0/0:8,0:8:23.99:0,24,262
chr10	77698185	.	TACAC	T	492.41	PASS	AB=0.692;AC=19;AF=0.380;AN=50;BaseQRankSum=-1.276;DP=553;FS=3.762;HRun=0;HaplotypeScore=86.9414;InbreedingCoeff=0.5492;MQ=63.68;MQ0=16;MQRankSum=0.358;QD=2.33;ReadPosRankSum=0.987;VQSLOD=1.6732;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:29,5:31:6.07:92,6,0	1/1:4,1:5:3.01:46,3,0	./.	./.	0/0:16,0:16:12.04:0,12,252	0/0:23,0:22:15.05:0,15,299	0/0:23,0:23:12.54:0,13,282	0/0:30,0:28:2.29:0,2,6	0/0:11,0:13:5.72:0,6,33	1/1:17,0:15:2.55:30,3,0	1/1:10,6:16:9.02:120,9,0	1/1:21,2:22:3:46,3,0	0/0:11,0:13:10.48:0,10,56	0/0:10,0:10:2.99:0,3,23	0/0:16,0:16:9.03:0,9,202	0/0:11,0:11:2.84:0,3,42	0/0:17,0:25:13.54:0,14,197	0/0:17,0:17:27.05:0,27,530	0/0:14,0:14:0.33:0,0,0	1/1:16,5:21:3.01:46,3,0	1/1:49,0:45:11.38:91,11,0	0/0:20,0:19:4.54:0,5,27	./.	0/0:15,0:24:13.90:0,14,71	0/0:16,0:15:9.03:0,9,137	1/1:18,4:22:6.48:93,6,0	1/1:12,3:15:2.32:45,2,0	0/1:5,3:9:6.42:40,0,6
chr10	77698480	.	TG	T	7463.47	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=16.154;DP=565;FS=9.045;HRun=8;HaplotypeScore=113.7260;InbreedingCoeff=0.9976;MQ=79.06;MQ0=0;MQRankSum=-4.572;QD=24.63;ReadPosRankSum=4.756;VQSLOD=4.0709;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.14:0,60,706	0/0:5,0:5:15.05:0,15,181	0/0:17,0:17:33.76:0,34,469	0/0:20,0:19:50.62:0,51,561	1/1:1,14:15:39.06:376,39,0	1/1:2,20:22:57.09:550,57,0	1/1:3,18:21:45.07:434,45,0	1/1:3,14:17:42.05:399,42,0	1/1:4,16:20:51.08:492,51,0	0/0:24,0:24:63.08:0,63,730	0/0:21,0:21:57.12:0,57,651	1/1:2,15:17:48.08:463,48,0	1/1:4,17:21:51.07:492,51,0	1/1:3,18:21:54.09:521,54,0	1/1:0,27:27:75.12:724,75,0	1/1:1,18:19:51.08:492,51,0	1/1:1,23:24:60.10:579,60,0	1/1:1,14:15:42.07:405,42,0	0/0:25,0:25:57.17:0,57,678	0/0:27,0:27:75.22:0,75,894	0/0:22,0:22:66.19:0,66,785	1/1:4,8:12:27.04:261,27,0	1/1:1,16:17:48.08:463,48,0	1/1:2,13:15:36.05:347,36,0	1/1:3,17:20:48.08:463,48,0	0/0:22,1:24:37.09:0,37,710	0/0:34,0:35:99:0,99,1173	0/0:19,0:19:54.16:0,54,641
chr10	77698553	.	TAA	T	5057.55	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.139;DP=568;FS=3.315;HRun=5;HaplotypeScore=124.5901;InbreedingCoeff=0.9971;MQ=83.40;MQ0=0;MQRankSum=-11.326;QD=37.46;ReadPosRankSum=2.412;VQSLOD=3.5974;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.13:0,57,999	0/0:10,0:10:30.10:0,30,548	0/0:21,0:21:56.39:0,56,935	0/0:16,0:16:36.09:0,36,588	0/0:22,0:22:63.15:0,63,1094	0/0:25,0:25:72.22:0,72,1226	0/0:18,0:18:42.14:0,42,787	0/0:27,0:27:81.26:0,81,1440	1/1:3,13:16:45.15:649,45,0	0/0:30,0:30:87.29:0,87,1587	0/0:21,0:21:63.16:0,63,1059	1/1:5,15:20:54.18:789,54,0	1/1:4,18:22:57.11:771,57,0	1/1:4,13:17:39.13:558,39,0	0/0:17,0:17:45.15:0,45,787	0/0:27,0:27:78.27:0,78,1453	0/0:25,0:25:63.17:0,63,1046	1/1:0,12:12:33.11:485,33,0	0/0:24,0:24:72.20:0,72,1303	0/0:30,0:30:87.27:0,87,1515	0/0:20,0:20:60.19:0,60,1085	1/1:3,12:15:42.11:569,42,0	1/1:1,24:25:72.24:1026,72,0	1/1:2,6:8:15.05:212,15,0	0/0:12,0:12:36.12:0,36,667	0/0:23,0:23:69.19:0,69,1253	0/0:35,0:35:93.29:0,93,1674	0/0:11,0:11:33.11:0,33,602
chr10	77698586	.	GA	G	10322.56	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=19.258;DP=623;FS=0.950;HRun=5;HaplotypeScore=104.2382;InbreedingCoeff=0.9998;MQ=84.04;MQ0=0;MQRankSum=-0.973;QD=31.19;ReadPosRankSum=0.341;VQSLOD=4.5202;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.29:0,87,1187	0/0:12,0:12:36.12:0,36,493	0/0:27,0:27:66.69:0,67,897	0/0:15,0:15:45.13:0,45,587	1/1:1,24:25:66.19:749,66,0	1/1:2,27:29:78.22:885,78,0	1/1:0,12:12:30.09:339,30,0	1/1:2,24:26:72.19:806,72,0	1/1:2,18:20:57.15:637,57,0	0/0:37,0:37:99:0,108,1449	0/0:22,0:22:63.21:0,63,858	1/1:0,29:29:84.24:952,84,0	1/1:2,20:22:66.16:735,66,0	1/1:0,16:16:48.14:544,48,0	1/1:0,17:17:48.14:545,48,0	1/1:0,25:25:72.21:816,72,0	1/1:1,24:25:66.18:743,66,0	1/1:2,10:12:33.01:346,33,0	0/0:26,0:26:78.24:0,78,1045	0/0:33,0:33:99:0,99,1347	0/0:16,0:16:48.16:0,48,656	1/1:2,18:20:51.14:576,51,0	1/1:2,23:25:69.20:781,69,0	1/1:1,12:13:36.08:394,36,0	1/1:1,14:15:42.12:475,42,0	0/0:28,0:28:75.24:0,75,1005	0/0:36,0:36:99:0,102,1378	0/0:10,0:10:30.10:0,30,410
chr10	77704463	.	T	TA	48.01	PASS	AB=0.967;AC=10;AF=0.179;AN=56;BaseQRankSum=5.228;DP=362;FS=8.839;HRun=0;HaplotypeScore=133.2972;InbreedingCoeff=0.1784;MQ=41.81;MQ0=0;MQRankSum=-3.666;QD=0.59;ReadPosRankSum=-1.548;VQSLOD=1.8351;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:15.52:0,16,211	0/1:4,0:4:0.92:1,0,32	0/0:7,0:4:10.58:0,11,130	0/0:12,0:8:27.07:0,27,340	0/1:8,1:8:0.02:0,0,0	0/0:13,1:14:20.76:0,21,170	0/0:22,0:22:27.04:0,27,329	0/0:23,0:23:53.16:0,53,686	0/0:9,1:10:5.80:0,6,32	0/0:17,0:17:44.12:0,44,500	0/0:6,0:6:3.01:0,3,42	0/0:12,0:12:9.06:0,9,47	0/1:14,0:14:24.55:25,0,58	1/1:11,0:11:3.11:13,3,0	0/0:31,1:32:23.78:0,24,193	0/0:31,2:33:53.80:0,54,582	0/0:8,0:8:6.02:0,6,75	0/0:5,0:5:9:0,9,104	0/0:10,0:9:24.07:0,24,321	0/0:9,0:8:8.64:0,9,125	0/0:15,0:14:12.04:0,12,164	1/1:8,3:10:0.50:23,0,0	0/1:10,0:9:10.74:39,0,11	0/1:4,0:4:4.89:5,0,11	0/0:10,1:11:5.73:0,6,83	0/0:18,0:18:54.15:0,54,706	0/1:17,2:19:61.47:61,0,219	0/0:6,0:6:17.95:0,18,186
chr10	77704477	.	G	GC	70.64	PASS	AB=0.840;AC=8;AF=0.143;AN=56;BaseQRankSum=7.180;DP=562;FS=27.721;HRun=0;HaplotypeScore=180.3430;InbreedingCoeff=0.1818;MQ=42.81;MQ0=4;MQRankSum=-5.316;QD=0.79;ReadPosRankSum=-1.745;VQSLOD=0.9428;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:39.86:0,40,462	0/0:8,0:8:24.08:0,24,334	0/0:24,0:13:30.01:0,30,376	0/0:33,0:25:72.17:0,72,920	0/0:17,0:16:8.92:0,9,101	0/0:18,0:18:44.87:0,45,542	0/0:35,0:35:88.32:0,88,1157	0/0:45,0:45:99:0,108,1421	0/1:11,2:13:31.99:32,0,163	0/0:26,0:26:65.14:0,65,804	0/0:13,0:13:18.93:0,19,235	0/1:10,4:14:44.83:45,0,174	0/1:11,4:15:63.96:64,0,117	0/1:10,3:13:18.94:19,0,61	0/0:41,0:41:91.59:0,92,968	0/0:42,0:42:99:0,113,1419	0/0:12,0:12:23.98:0,24,285	0/0:6,0:6:12.03:0,12,142	0/0:18,0:12:36.10:0,36,485	0/0:20,0:19:36.12:0,36,438	0/0:22,0:21:45.06:0,45,596	0/1:9,1:9:10.63:17,0,11	0/1:13,2:14:0.92:7,0,1	1/1:8,1:9:5.72:17,6,0	0/0:13,0:13:33.04:0,33,422	0/0:24,0:24:71.24:0,71,938	0/0:28,0:28:52.38:0,52,740	0/0:11,0:11:30.10:0,30,419
chr10	77704493	.	GGA	G	272.12	PASS	AB=0.724;AC=9;AF=0.161;AN=56;BaseQRankSum=8.589;DP=792;FS=67.337;HRun=0;HaplotypeScore=228.5332;InbreedingCoeff=0.0460;MQ=38.58;MQ0=5;MQRankSum=-6.526;QD=2.14;ReadPosRankSum=2.569;VQSLOD=0.5854;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:49.48:0,49,882	0/0:13,0:13:27.08:0,27,522	0/0:45,0:26:78.25:0,78,1479	0/0:55,0:44:99:0,123,2297	0/0:33,0:33:27.08:0,27,546	0/0:20,0:20:43.66:0,44,782	0/0:41,0:41:99:0,108,2107	0/0:56,0:56:99:0,138,2684	0/1:12,7:19:53.24:53,0,489	0/0:46,0:45:99:0,115,2014	0/0:25,0:25:26.41:0,26,544	0/1:11,7:18:50.22:50,0,227	0/1:8,9:17:90.36:90,0,179	0/1:8,10:18:89.98:90,0,192	0/0:43,0:43:99:0,112,2131	0/0:43,0:43:99:0,125,2366	0/0:13,0:13:36.12:0,36,704	0/1:5,1:6:18.93:19,0,79	0/0:29,0:22:59.57:0,60,1121	0/0:40,0:39:56.14:0,56,1005	0/0:26,0:24:54.13:0,54,1053	1/1:16,2:17:5.80:42,6,0	0/1:17,4:21:61.22:61,0,175	0/1:4,6:10:1.89:2,0,25	0/0:30,0:30:42.02:0,42,818	0/0:40,0:40:99:0,120,2223	0/0:31,0:31:73.19:0,73,1381	0/0:16,0:16:48.14:0,48,891
chr10	77704522	.	GTGA	G	912.95	PASS	AB=0.809;AC=14;AF=0.250;AN=56;BaseQRankSum=7.325;DP=738;FS=63.923;HRun=0;HaplotypeScore=236.7573;InbreedingCoeff=0.6760;MQ=42.05;MQ0=9;MQRankSum=-7.488;QD=7.80;ReadPosRankSum=2.097;VQSLOD=1.1020;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:36.05:0,36,645	0/0:15,0:15:33.03:0,33,601	0/0:34,0:26:45.08:0,45,760	0/0:48,0:40:44.11:0,44,995	0/0:34,0:34:57.15:0,57,1014	0/0:17,0:17:39.59:0,40,743	0/0:38,0:38:56.17:0,56,1074	0/0:38,0:36:66.17:0,66,1149	0/1:13,6:19:42.09:201,0,42	0/0:42,0:41:93.12:0,93,1672	0/0:27,0:27:41.98:0,42,842	1/1:14,3:18:18.02:241,18,0	1/1:13,5:18:14.56:189,15,0	1/1:13,3:16:11.77:166,12,0	0/0:42,0:42:78.23:0,78,1555	0/0:42,0:42:95.97:0,96,1926	0/0:16,0:16:39.13:0,39,773	0/1:5,1:6:35.48:74,0,35	0/0:22,0:15:33.11:0,33,639	0/0:35,0:34:41.58:0,42,730	0/0:32,0:29:72.16:0,72,1435	1/1:14,2:16:1.22:82,1,0	1/1:12,2:14:5.99:88,6,0	1/1:8,2:10:0.79:40,1,0	0/0:34,0:34:50.62:0,51,898	0/0:37,0:36:84.28:0,84,1652	0/0:31,0:31:72.24:0,72,1438	0/0:17,0:17:45.15:0,45,882
chr10	77704837	.	CT	C	2829.82	PASS	AB=0.850;AC=18;AF=0.321;AN=56;BaseQRankSum=5.380;DP=547;FS=1.706;HRun=10;HaplotypeScore=78.0255;InbreedingCoeff=0.8024;MQ=71.83;MQ0=0;MQRankSum=-0.009;QD=15.38;ReadPosRankSum=3.661;VQSLOD=4.2887;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:39.09:0,39,421	0/0:9,0:9:21.06:0,21,232	0/0:16,1:16:3.21:0,3,194	0/0:10,0:9:8.74:0,9,116	0/0:23,0:23:54.11:0,54,585	0/0:12,0:12:18.09:0,18,257	0/0:23,1:24:40.11:0,40,663	0/0:33,0:33:63.60:0,64,662	1/1:1,20:21:53.99:469,54,0	0/0:16,0:16:45.10:0,45,479	0/0:27,0:27:72.13:0,72,770	1/1:2,13:15:32.99:286,33,0	1/1:0,16:16:38.99:338,39,0	1/1:1,16:17:44.99:391,45,0	0/0:18,0:18:51.11:0,51,548	0/0:14,0:14:39.11:0,39,431	0/0:19,0:19:48.13:0,48,531	1/1:2,17:20:44.03:371,44,0	0/1:14,5:20:82.11:82,0,246	0/0:22,1:22:31.14:0,31,571	0/0:21,0:21:54.09:0,54,570	1/1:3,18:21:47.95:416,48,0	1/1:2,11:13:26.90:225,27,0	1/1:2,21:23:50.99:443,51,0	0/1:16,2:18:16.01:16,0,296	0/0:33,0:34:81.04:0,81,864	0/0:26,0:26:63.14:0,63,684	0/0:20,0:21:62.98:0,63,668
chr10	77705949	.	G	GGTGT	1071.58	PASS	AB=0.895;AC=26;AF=0.619;AN=42;BaseQRankSum=-1.221;DP=597;FS=1.240;HRun=0;HaplotypeScore=110.3167;InbreedingCoeff=0.2437;MQ=69.42;MQ0=10;MQRankSum=-0.454;QD=3.12;ReadPosRankSum=-0.555;VQSLOD=2.2581;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:8.92:0,9,138	0/0:3,0:6:6.01:0,6,65	./.	./.	1/1:19,0:20:2.74:12,3,0	1/1:18,0:20:9.01:136,9,0	1/1:26,4:34:5.75:83,6,0	1/1:25,0:25:6.41:42,6,0	0/1:12,0:16:15.87:16,0,37	./.	./.	1/1:27,0:26:4.83:47,5,0	1/1:12,0:19:3.99:16,4,0	0/1:21,0:21:15.35:74,0,15	0/1:16,2:17:37.03:131,0,37	1/1:15,5:20:2.67:70,3,0	1/1:21,0:26:24.04:328,24,0	0/0:21,0:23:5.35:0,5,55	./.	./.	0/0:44,0:42:6.36:0,6,77	1/1:20,0:20:5.75:81,6,0	1/1:14,0:14:5.99:62,6,0	1/1:28,0:41:10.98:49,11,0	0/1:19,2:22:40.06:64,0,40	0/0:23,0:21:0.47:0,0,1	0/0:11,0:13:3:0,3,28	./.
chr10	77707626	.	CTT	C	11172.82	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=16.184;DP=781;FS=1.593;HRun=2;HaplotypeScore=128.2022;InbreedingCoeff=1.0000;MQ=83.23;MQ0=0;MQRankSum=-2.376;QD=46.55;ReadPosRankSum=3.246;VQSLOD=4.8101;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,157,3155	1/1:0,12:12:36.12:585,36,0	0/0:24,0:24:62.39:0,62,1270	0/0:21,0:21:54.19:0,54,1062	0/0:30,0:30:89.65:0,90,1715	0/0:30,0:30:90.31:0,90,1824	0/0:34,0:34:99:0,102,1961	0/0:32,0:32:96.32:0,96,1891	0/0:19,0:19:57.20:0,57,1149	1/1:0,33:33:99:1588,99,0	1/1:0,16:16:42.14:684,42,0	0/0:33,0:33:99:0,99,1971	0/0:27,0:27:81.26:0,81,1607	0/0:31,0:31:93.32:0,93,1886	0/0:20,0:20:60.21:0,60,1210	0/0:30,0:30:90.31:0,90,1826	0/0:28,0:28:84.27:0,84,1632	0/0:34,0:34:99:0,102,1933	1/1:0,23:23:69.23:1103,69,0	1/1:0,25:25:72.25:1162,72,0	1/1:0,47:47:99:2006,123,0	0/0:25,0:25:75.16:0,75,1387	0/0:22,0:22:66.23:0,66,1332	0/0:23,0:23:69.15:0,69,1312	0/0:26,0:26:78.24:0,78,1505	1/1:0,36:36:99:1731,108,0	1/1:0,21:21:63.15:995,63,0	1/1:0,27:27:81.28:1319,81,0
chr10	77707993	.	T	TCTTC	14604.47	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-5.692;DP=577;FS=57.116;HRun=0;HaplotypeScore=101.4546;InbreedingCoeff=0.9811;MQ=62.42;MQ0=6;MQRankSum=-5.790;QD=47.11;ReadPosRankSum=-1.261;VQSLOD=2.2659;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.02:0,81,1194	1/1:6,2:10:29.76:629,30,0	0/0:31,0:20:37.37:0,37,537	0/0:30,0:20:11.86:0,12,489	1/1:1,22:24:59.93:1260,60,0	1/1:2,14:16:30.10:728,30,0	1/1:17,14:30:72.21:1583,72,0	1/1:5,18:25:60.10:1075,60,0	0/0:26,0:26:75.23:0,75,1273	1/1:5,11:19:50.74:941,51,0	1/1:2,1:6:18.05:375,18,0	0/0:26,0:26:72.20:0,72,1182	0/0:27,0:27:72.19:0,72,1203	0/0:20,0:19:57.13:0,57,953	1/1:4,28:33:51.18:1307,51,0	1/1:2,19:21:45.15:1158,45,0	1/1:7,18:25:31.41:1179,31,0	1/1:5,13:19:30.07:699,30,0	1/1:9,0:13:29.87:590,30,0	1/1:4,7:13:31.30:567,31,0	1/1:4,0:6:8.53:149,9,0	0/0:24,0:24:59.99:0,60,963	0/0:22,0:22:60.14:0,60,926	0/0:30,0:30:75.22:0,75,1275	1/1:10,8:18:51.12:949,51,0	1/1:6,6:12:33.07:699,33,0	1/1:4,1:6:15.02:303,15,0	1/1:6,2:10:20.97:412,21,0
chr10	77708127	.	CCT	C	4112.78	PASS	AB=0.746;AC=20;AF=0.357;AN=56;BaseQRankSum=6.841;DP=607;FS=3.224;HRun=0;HaplotypeScore=119.0818;InbreedingCoeff=0.0129;MQ=42.96;MQ0=41;MQRankSum=-7.876;QD=18.44;ReadPosRankSum=1.701;VQSLOD=4.0454;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:63.05:0,63,1024	0/1:2,1:3:42.61:43,0,54	0/0:67,0:9:22.48:0,22,244	0/0:92,0:16:4.39:0,4,185	0/1:10,9:18:10.98:457,0,11	0/1:7,3:9:99:118,0,177	0/1:21,2:21:99:155,0,125	1/1:10,14:21:6.67:597,7,0	0/0:28,0:28:75.26:0,75,1380	0/1:11,6:15:99:196,0,112	1/1:3,3:6:12.04:166,12,0	0/0:29,0:28:78.22:0,78,1359	0/0:17,0:17:51.17:0,51,895	0/0:23,0:21:58.44:0,58,1004	0/1:7,8:15:99:373,0,131	0/1:4,9:13:84.11:351,0,84	0/1:10,4:12:14.95:208,0,15	0/0:28,0:27:32.18:0,32,308	0/1:12,2:11:81.47:81,0,86	0/0:4,0:2:5.89:0,6,69	1/1:4,6:7:6.02:97,6,0	0/0:23,0:22:60.20:0,60,1088	0/0:17,0:16:45.59:0,46,771	0/0:31,0:31:87.21:0,87,1457	0/1:9,17:23:50.27:727,0,50	0/1:14,0:11:44.99:124,0,45	1/1:2,7:9:8.74:290,9,0	0/1:2,4:6:6.66:129,0,7
chr10	77708129	.	T	TTCC	5390.58	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=7.217;DP=608;FS=2.058;HRun=0;HaplotypeScore=148.6319;InbreedingCoeff=0.8613;MQ=42.93;MQ0=38;MQRankSum=-8.918;QD=23.75;ReadPosRankSum=-2.018;VQSLOD=4.7388;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:51.15:0,51,744	1/1:2,0:2:3.01:49,3,0	0/0:68,0:9:20.28:0,20,256	0/0:92,0:16:14.33:0,14,228	1/1:21,0:20:33.11:580,33,0	1/1:13,0:12:8.89:158,9,0	1/1:14,9:21:13.94:238,14,0	1/1:24,0:22:42.14:714,42,0	0/0:26,0:26:75.22:0,75,970	1/1:18,0:16:18.06:298,18,0	1/1:5,0:5:12.04:221,12,0	0/0:26,0:25:43.02:0,43,808	0/0:17,0:17:22.01:0,22,532	0/0:23,0:21:23.35:0,23,517	1/1:13,2:15:32.10:540,32,0	1/1:13,0:13:30.05:510,30,0	1/1:11,1:10:3.12:298,3,0	0/0:27,0:27:46.57:0,47,664	1/1:14,0:11:6.48:77,6,0	0/0:4,0:3:0:0,0,0	1/1:8,0:7:5.75:97,6,0	0/0:23,0:23:26.55:0,27,555	0/0:17,0:16:25.25:0,25,448	0/0:31,0:31:70.99:0,71,1038	1/1:28,0:24:56.21:987,56,0	1/1:8,6:12:9.03:160,9,0	1/1:11,0:11:20.91:324,21,0	1/1:6,0:6:9.03:142,9,0
chr10	77708189	.	TTCCTTCCTTCCTTCCTCCCTCCCTCCCTCC	T	3920.51	PASS	AB=0.944;AC=21;AF=0.420;AN=50;BaseQRankSum=7.647;DP=363;FS=23.231;HRun=0;HaplotypeScore=266.3393;InbreedingCoeff=0.1227;MQ=38.86;MQ0=48;MQRankSum=-6.031;QD=25.13;ReadPosRankSum=3.206;VQSLOD=0.7527;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:63.21:0,63,3103	./.	./.	./.	0/1:11,0:9:99:202,0,326	0/1:10,0:8:40.63:41,0,289	0/1:17,0:8:0.80:1,0,177	0/0:4,0:1:0.89:0,1,2	0/0:22,0:18:48.14:0,48,3011	0/1:8,2:5:99:558,0,291	1/1:3,0:1:3.01:36,3,0	0/0:20,0:17:42.62:0,43,3092	0/0:16,0:12:27.97:0,28,2048	0/0:24,0:20:44.89:0,45,3029	0/0:10,0:7:20.81:0,21,446	0/1:11,0:10:99:309,0,257	0/1:16,0:12:1.49:1,0,176	0/1:30,0:28:99:194,0,980	1/1:4,0:1:3.01:200,3,0	0/1:1,1:2:39.06:118,0,39	1/1:4,1:1:3.01:131,3,0	0/0:18,0:16:39.13:0,39,2892	0/0:16,0:9:23.91:0,24,1848	0/0:48,0:46:92.30:0,92,6218	0/1:17,0:14:99:352,0,421	1/1:2,1:2:3.01:201,3,0	1/1:6,4:9:0.36:1009,0,0	1/1:4,1:5:11.91:568,12,0
chr10	77708202	.	TCCTCCCTCCCTCCCTCCC	T	2908.79	PASS	AB=0.918;AC=24;AF=0.480;AN=50;BaseQRankSum=7.702;DP=345;FS=15.396;HRun=0;HaplotypeScore=184.1043;InbreedingCoeff=0.3551;MQ=38.26;MQ0=52;MQRankSum=-7.113;QD=22.90;ReadPosRankSum=2.193;VQSLOD=1.9446;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:35.59:0,36,2063	./.	./.	./.	1/1:7,2:7:8.99:307,9,0	0/1:7,1:7:70.61:110,0,71	1/1:14,0:4:8.94:76,9,0	1/1:5,0:2:2.92:17,3,0	0/0:21,0:16:42.13:0,42,1603	0/1:9,0:5:99:308,0,260	0/0:4,0:2:2:0,2,66	0/0:20,0:17:45.15:0,45,1833	0/0:16,0:12:23.90:0,24,780	0/0:25,0:21:44.89:0,45,1705	0/1:5,2:6:5.26:5,0,176	1/1:6,4:9:12.01:466,12,0	0/1:16,0:11:65.73:66,0,100	0/0:24,0:21:23.59:0,24,482	1/1:6,0:1:3.01:118,3,0	0/1:3,0:3:47.65:63,0,48	1/1:5,0:1:3.01:76,3,0	0/0:17,0:15:36.10:0,36,1617	0/0:17,0:10:27.01:0,27,909	0/0:44,0:42:69.69:0,70,2993	1/1:5,5:9:15.02:561,15,0	1/1:4,0:3:3.01:102,3,0	0/1:12,0:10:56.03:514,0,56	1/1:5,0:5:7.44:294,7,0
chr10	77708217	.	TCC	T	410.04	PASS	AB=0.988;AC=23;AF=0.460;AN=50;BaseQRankSum=7.498;DP=379;FS=5.300;HRun=3;HaplotypeScore=118.5742;InbreedingCoeff=0.2524;MQ=38.07;MQ0=53;MQRankSum=-6.003;QD=2.52;ReadPosRankSum=4.527;VQSLOD=-0.2308;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:37.33:0,37,784	./.	./.	./.	1/1:4,0:2:6.02:72,6,0	0/1:9,0:7:6.26:29,0,6	0/0:14,0:3:2.80:0,3,13	0/0:8,0:2:3.01:0,3,33	0/0:29,0:24:49.60:0,50,384	0/1:11,0:7:41.41:45,0,41	0/0:6,0:4:2.03:0,2,6	0/0:28,2:26:14.11:0,14,279	0/1:19,1:16:1.17:1,0,100	0/1:28,1:24:2.43:2,0,315	1/1:7,0:4:7.84:82,8,0	1/1:9,1:8:0.06:66,0,0	0/1:13,0:8:4.98:5,0,31	0/1:20,0:17:18:18,0,43	1/1:4,0:2:5.97:49,6,0	0/0:3,0:3:2.26:0,2,16	1/1:4,0:1:2.22:7,2,0	0/0:24,0:20:28.62:0,29,350	0/0:19,0:11:15.15:0,15,128	0/0:47,0:45:46.14:0,46,508	1/1:9,0:8:14.82:114,15,0	1/1:5,0:3:2.22:7,2,0	0/1:12,0:10:8.92:39,0,9	1/1:6,0:6:2.81:24,3,0
chr10	77708502	.	TG	T	3897.29	PASS	AB=0.929;AC=50;AF=0.962;AN=52;BaseQRankSum=-3.041;DP=297;FS=3.994;HRun=2;HaplotypeScore=64.5663;InbreedingCoeff=-0.1214;MQ=53.88;MQ0=0;MQRankSum=-1.433;QD=13.77;ReadPosRankSum=-0.205;VQSLOD=2.6757;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:3.01:39,3,0	1/1:0,5:6:9.03:116,9,0	0/1:6,0:6:16.15:16,0,56	0/1:4,1:6:29.97:30,0,42	1/1:1,10:11:3.01:39,3,0	1/1:0,10:9:6.02:78,6,0	1/1:0,13:13:3.01:39,3,0	1/1:4,19:23:54.12:666,54,0	1/1:2,8:10:9.03:117,9,0	1/1:0,13:12:33.11:425,33,0	1/1:0,4:4:3.01:39,3,0	1/1:0,17:17:9.03:117,9,0	1/1:1,8:9:15.05:195,15,0	1/1:0,11:11:9.01:101,9,0	1/1:0,3:3:3.01:39,3,0	1/1:0,7:7:3.01:39,3,0	1/1:0,14:14:21.07:272,21,0	1/1:1,13:14:15.23:297,15,0	1/1:0,10:10:30.10:384,30,0	./.	1/1:2,11:13:12.04:156,12,0	./.	1/1:0,11:9:6.02:78,6,0	1/1:0,15:13:3.01:39,3,0	1/1:0,9:8:3.01:39,3,0	1/1:0,8:8:21.07:272,21,0	1/1:3,11:14:18.06:229,18,0	1/1:0,5:5:3.01:39,3,0
chr10	77708787	.	C	CA	512.34	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.910;DP=627;FS=0.000;HRun=8;HaplotypeScore=95.0563;InbreedingCoeff=0.9304;MQ=64.66;MQ0=13;MQRankSum=1.120;QD=18.98;ReadPosRankSum=-1.193;VQSLOD=2.8577;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:99:0,126,1141	0/0:10,0:10:27.01:0,27,247	0/0:20,0:10:14.81:0,15,204	0/0:25,0:16:45.02:0,45,410	0/0:24,0:23:57.01:0,57,517	0/0:21,0:20:54.02:0,54,494	0/0:23,0:23:60.03:0,60,549	0/0:31,0:31:74.93:0,75,667	0/0:18,0:18:48.01:0,48,435	0/0:23,0:23:69.04:0,69,631	0/0:16,0:16:36.02:0,36,329	0/0:21,0:21:57.02:0,57,517	0/0:18,0:18:48.03:0,48,439	0/0:24,0:24:60:0,60,544	0/0:21,0:21:60.02:0,60,544	0/0:18,0:18:48.02:0,48,439	0/0:26,0:25:60.02:0,60,549	0/0:24,0:24:65.96:0,66,594	0/0:22,0:23:65.07:0,65,582	0/0:17,0:17:45.02:0,45,412	0/0:27,0:27:72.04:0,72,659	0/0:19,0:19:54.03:0,54,494	0/0:21,0:21:60:0,60,539	0/0:29,0:29:81.04:0,81,741	0/0:16,0:16:45.02:0,45,412	1/1:7,20:26:9.79:596,10,0	0/0:23,0:23:66.04:0,66,604	0/0:12,0:12:30.01:0,30,274
chr10	77709075	.	TC	T	9421.62	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=9.343;DP=602;FS=3.280;HRun=6;HaplotypeScore=63.9503;InbreedingCoeff=0.9985;MQ=95.47;MQ0=0;MQRankSum=-4.204;QD=26.32;ReadPosRankSum=2.234;VQSLOD=5.4078;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,117,1536	1/1:0,18:18:45.11:484,45,0	0/0:33,0:33:76.19:0,76,1078	0/0:21,1:23:18.09:0,18,533	1/1:2,18:20:51.13:548,51,0	1/1:1,18:19:45.11:483,45,0	1/1:5,16:21:42.10:451,42,0	1/1:2,21:23:63.16:677,63,0	0/0:29,0:29:80.74:0,81,1021	1/1:1,24:25:69.16:733,69,0	1/1:0,9:9:27.07:290,27,0	0/0:21,0:21:63.20:0,63,828	0/0:20,0:20:60.16:0,60,758	0/0:10,0:10:30.10:0,30,395	1/1:4,16:20:39.10:419,39,0	1/1:0,15:15:42.11:451,42,0	1/1:3,16:19:39.09:419,39,0	1/1:0,16:16:48.12:516,48,0	1/1:4,15:19:39.06:403,39,0	1/1:2,23:25:66.16:709,66,0	1/1:4,26:30:66.16:710,66,0	0/0:23,0:23:60.17:0,60,759	0/0:17,0:17:33.09:0,33,419	0/0:24,0:24:63.19:0,63,814	1/1:1,16:17:42.10:451,42,0	1/1:3,25:28:75.18:806,75,0	1/1:2,15:17:39.09:419,39,0	1/1:1,16:17:42.11:451,42,0
chr10	77709205	.	AAC	A	709.33	PASS	AB=0.966;AC=29;AF=0.558;AN=52;BaseQRankSum=7.738;DP=603;FS=7.423;HRun=0;HaplotypeScore=104.8458;InbreedingCoeff=-0.2962;MQ=62.17;MQ0=24;MQRankSum=0.560;QD=1.68;ReadPosRankSum=-2.453;VQSLOD=0.8851;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,1:37:44.31:44,0,280	1/1:5,0:5:2.92:17,3,0	./.	./.	0/1:23,0:23:14.82:15,0,118	0/1:25,0:25:8.85:21,0,9	1/1:24,0:24:11.49:66,11,0	0/0:18,0:17:8.89:0,9,64	0/1:15,0:16:28.62:29,0,141	0/1:16,0:17:33.61:34,0,71	1/1:17,0:17:8.87:59,9,0	0/1:8,5:13:43.77:83,0,44	0/1:12,0:12:12.96:13,0,206	0/0:10,0:10:12.04:0,12,178	1/1:16,0:16:2.60:86,3,0	0/1:13,0:13:14.38:39,0,14	0/1:32,0:32:36.79:140,0,37	0/1:15,0:16:0.95:1,0,154	1/1:10,0:10:5.59:34,6,0	1/1:12,0:11:5.87:35,6,0	0/1:22,0:22:12.97:13,0,17	0/1:15,1:16:3.15:3,0,239	0/0:18,0:18:15.67:0,16,395	0/1:22,2:24:29.56:30,0,400	0/1:19,0:19:7.33:67,0,7	0/1:20,0:19:2.78:3,0,84	0/1:22,0:22:13.45:13,0,18	0/1:8,0:8:15.89:16,0,31
chr10	77709246	.	ACC	A	5233.31	PASS	AB=0.564;AC=35;AF=0.625;AN=56;BaseQRankSum=11.071;DP=628;FS=3.303;HRun=3;HaplotypeScore=117.0513;InbreedingCoeff=0.7802;MQ=70.56;MQ0=16;MQRankSum=-2.293;QD=13.77;ReadPosRankSum=2.813;VQSLOD=2.0566;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,1:35:21.26:0,21,817	1/1:0,7:7:3.01:42,3,0	0/0:40,0:20:52.98:0,53,509	0/0:40,0:21:39.05:0,39,397	1/1:27,4:31:43.66:505,44,0	1/1:13,4:17:34.87:324,35,0	1/1:1,21:22:12.03:156,12,0	1/1:27,0:25:53.09:529,53,0	0/0:17,0:16:35.26:0,35,400	1/1:4,22:26:54.86:503,55,0	1/1:0,17:17:8.88:132,9,0	0/0:15,0:15:3.89:0,4,236	0/0:18,1:18:10.44:0,10,517	0/0:10,0:10:30.04:0,30,377	1/1:15,6:20:50.46:500,50,0	1/1:1,11:12:8.31:125,8,0	1/1:25,9:33:72.19:737,72,0	0/1:5,17:22:42.55:43,0,56	1/1:9,1:10:10.44:215,10,0	1/1:0,11:11:6.02:78,6,0	1/1:5,30:35:8.99:90,9,0	0/0:23,0:22:41.35:0,41,473	0/0:22,0:22:51.02:0,51,693	0/0:27,0:27:51.77:0,52,775	1/1:16,8:24:56.50:536,57,0	1/1:25,1:25:68.95:624,69,0	1/1:1,18:19:3.01:44,3,0	1/1:17,1:18:6.07:52,6,0
chr10	77709250	.	ACC	A	4930.43	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=10.089;DP=598;FS=1.235;HRun=4;HaplotypeScore=114.3265;InbreedingCoeff=0.8027;MQ=73.79;MQ0=14;MQRankSum=-0.465;QD=13.73;ReadPosRankSum=2.470;VQSLOD=1.4054;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:92.19:0,92,1573	1/1:6,0:6:3.01:42,3,0	0/0:41,0:21:59.94:0,60,893	0/0:41,0:23:66.11:0,66,936	1/1:28,1:29:43.64:504,44,0	1/1:14,2:16:32.48:294,32,0	1/1:20,1:21:12.03:153,12,0	1/1:26,0:24:48.86:504,49,0	0/0:16,0:15:42.13:0,42,736	1/1:24,0:24:49.42:448,49,0	1/1:15,1:16:8.55:91,9,0	0/0:15,0:15:36.11:0,36,613	0/0:18,0:17:42.21:0,42,883	0/0:10,0:10:30.10:0,30,550	1/1:20,2:21:50.28:479,50,0	1/1:11,0:11:5.77:121,6,0	1/1:31,1:33:71.73:730,72,0	0/1:22,0:22:32.78:33,0,64	1/1:10,0:10:28.76:227,29,0	1/1:11,0:11:6.02:78,6,0	1/1:30,0:30:6:65,6,0	0/0:20,0:20:54.11:0,54,903	0/0:18,0:18:42.12:0,42,746	0/0:26,0:26:69.15:0,69,1125	1/1:21,2:23:53.55:504,54,0	1/1:24,0:23:63.16:535,63,0	1/1:18,0:18:3.01:41,3,0	1/1:1,15:16:6.02:83,6,0
chr10	77710830	.	CGGGGGGGGGG	C	5744.05	PASS	AC=16;AF=0.364;AN=44;BaseQRankSum=2.257;DP=180;FS=7.572;HRun=15;HaplotypeScore=72.1418;InbreedingCoeff=0.6598;MQ=85.82;MQ0=2;MQRankSum=-4.517;QD=49.95;ReadPosRankSum=7.278;VQSLOD=2.8775;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:2.94:0,3,18	0/0:2,0:2:6.01:0,6,78	0/0:18,0:9:23.11:0,23,462	0/0:15,0:11:16.30:0,16,273	1/1:2,3:5:3.48:87,3,0	1/1:7,6:13:20.97:555,21,0	1/1:3,26:29:60.18:1562,60,0	1/1:4,6:10:18:513,18,0	./.	0/0:1,0:1:0:0,0,0	./.	0/0:1,0:1:3.01:0,3,98	0/0:1,0:1:3:0,3,26	0/0:4,0:4:12.04:0,12,378	1/1:0,9:9:27.09:771,27,0	1/1:0,9:9:24.08:683,24,0	1/1:10,18:28:35.97:978,36,0	0/0:4,0:4:3.01:0,3,128	0/0:3,0:3:6.02:0,6,188	./.	./.	./.	./.	0/0:4,0:4:3.01:0,3,71	1/1:1,11:12:21.07:596,21,0	0/0:3,0:3:6.02:0,6,147	0/0:2,0:2:3:0,3,26	0/0:1,0:1:3.01:0,3,103
chr10	77711335	.	T	TGA	5688.65	PASS	AB=0.695;AC=14;AF=0.250;AN=56;BaseQRankSum=-11.620;DP=750;FS=3.381;HRun=0;HaplotypeScore=103.7114;InbreedingCoeff=0.6772;MQ=72.44;MQ0=5;MQRankSum=-1.190;QD=25.74;ReadPosRankSum=-0.684;VQSLOD=5.3871;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:38.14:0,38,693	0/0:13,0:13:30.07:0,30,348	0/0:62,0:30:28.34:0,28,309	0/0:89,0:52:46.90:0,47,558	1/1:6,16:22:51.17:815,51,0	1/1:4,18:21:12.07:687,12,0	1/1:7,19:28:48.10:740,48,0	1/1:14,19:36:29.97:869,30,0	0/0:15,0:16:32.93:0,33,375	0/0:25,0:26:56.79:0,57,631	0/0:23,0:23:54.16:0,54,651	0/0:19,0:19:36.10:0,36,423	0/0:24,0:24:45.10:0,45,518	0/0:22,0:22:54.15:0,54,639	0/1:10,17:27:62.98:530,0,63	0/1:8,13:20:13.58:623,0,14	1/1:3,23:29:33.05:1022,33,0	0/0:34,0:34:75.23:0,75,904	0/0:7,0:8:17.88:0,18,191	0/0:17,0:18:38.74:0,39,426	0/0:26,0:26:54.15:0,54,632	0/0:17,0:17:42.13:0,42,506	0/0:19,0:19:48.12:0,48,556	0/0:48,0:48:82.27:0,82,1134	0/1:6,12:18:6.08:404,0,6	0/0:22,0:22:51.14:0,51,604	0/0:15,0:15:36.09:0,36,419	0/1:17,1:18:0.01:0,0,494
chr10	77711417	.	AAGAGACAG	A	6319.26	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.505;DP=679;FS=1.354;HRun=0;HaplotypeScore=177.0015;InbreedingCoeff=0.9976;MQ=74.21;MQ0=4;MQRankSum=-10.857;QD=45.14;ReadPosRankSum=0.279;VQSLOD=4.8235;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:68.72:0,69,2888	0/0:9,0:9:21.07:0,21,812	0/0:54,0:45:86.61:0,87,2572	0/0:51,0:38:59.74:0,60,1699	1/1:4,10:14:27.05:608,27,0	1/1:4,13:16:39.10:935,39,0	1/1:8,14:22:45.02:957,45,0	1/1:7,18:24:45.13:885,45,0	0/0:21,0:21:54.19:0,54,2030	0/0:30,0:30:72.19:0,72,2414	0/0:17,0:17:42.14:0,42,1533	0/0:22,0:22:48.16:0,48,1877	0/0:30,0:30:78.22:0,78,2872	0/0:15,0:15:36.12:0,36,1501	1/1:5,9:14:33.11:802,33,0	1/1:3,18:20:36.11:855,36,0	1/1:7,7:14:17.98:360,18,0	0/0:18,0:18:42.11:0,42,1548	0/0:18,0:16:39.13:0,39,1433	0/0:17,0:17:39.12:0,39,1402	0/0:31,0:31:81.28:0,81,3178	0/0:20,0:20:45.15:0,45,1813	0/0:15,0:15:39.13:0,39,1429	0/0:56,0:55:99:0,141,5212	1/1:2,11:13:36.12:918,36,0	0/0:33,0:33:93.31:0,93,3525	0/0:24,0:24:66.21:0,66,2570	0/0:24,0:24:51.17:0,51,1772
chr10	77712084	.	G	GC	1852.98	PASS	AB=0.621;AC=17;AF=0.304;AN=56;BaseQRankSum=-1.706;DP=488;FS=3.423;HRun=10;HaplotypeScore=59.9737;InbreedingCoeff=0.7655;MQ=86.11;MQ0=0;MQRankSum=-1.060;QD=13.24;ReadPosRankSum=-1.826;VQSLOD=3.2130;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:37.97:0,38,503	0/1:3,4:7:31.27:96,0,31	0/0:21,0:20:31.19:0,31,233	0/0:18,0:19:22.67:0,23,202	0/0:20,0:20:33.60:0,34,276	0/0:21,0:22:46.94:0,47,370	0/0:14,0:14:29.94:0,30,244	0/0:23,1:24:9.24:0,9,201	0/0:19,0:19:22.69:0,23,355	1/1:4,7:11:21.03:207,21,0	1/1:1,10:11:17.96:176,18,0	0/0:13,0:13:35.93:0,36,292	0/0:16,0:16:35.92:0,36,292	0/0:12,0:12:32.96:0,33,271	0/0:17,0:18:49.98:0,50,400	0/0:19,0:19:53.94:0,54,443	0/0:24,0:23:56.86:0,57,463	1/1:15,0:15:35.24:219,35,0	1/1:7,7:14:21.03:215,21,0	1/1:3,8:11:9.02:94,9,0	1/1:5,13:18:17.76:191,18,0	0/0:18,0:20:16.35:0,16,320	0/0:17,0:17:36.76:0,37,345	0/0:22,0:24:55:0,55,430	0/0:14,0:15:28.85:0,29,216	0/1:7,15:22:0.67:363,0,1	1/1:2,17:19:32.88:351,33,0	0/1:5,7:12:16.22:139,0,16
chr10	77712090	.	C	CA	472.62	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=6.559;DP=508;FS=0.990;HRun=0;HaplotypeScore=68.2789;InbreedingCoeff=0.0557;MQ=84.00;MQ0=0;MQRankSum=-0.327;QD=3.28;ReadPosRankSum=2.807;VQSLOD=2.9988;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:74.47:0,74,1003	0/1:7,0:7:5.05:5,0,72	0/0:21,0:20:48.44:0,48,529	0/0:22,0:21:43.15:0,43,506	0/0:23,0:23:60.98:0,61,701	0/0:20,0:20:57.11:0,57,726	0/0:13,0:13:39.10:0,39,497	0/0:22,0:22:56.23:0,56,604	0/0:22,0:22:59.42:0,59,766	0/1:11,0:11:22.96:23,0,59	0/1:15,0:15:6.53:7,0,55	0/0:14,0:14:39.12:0,39,528	0/0:14,0:14:42.12:0,42,553	0/0:13,0:13:36.11:0,36,487	0/0:21,0:21:57.12:0,57,741	0/0:19,0:19:57.15:0,57,773	0/0:25,0:24:72.18:0,72,922	1/1:0,16:16:36.11:501,36,0	0/1:16,0:16:7.22:7,0,82	0/0:12,0:12:4.20:0,4,130	0/1:17,0:17:18.90:19,0,76	0/0:21,0:21:47.08:0,47,706	0/0:17,0:17:48.02:0,48,634	0/0:22,0:22:63.08:0,63,802	0/0:15,0:15:42.05:0,42,497	0/1:26,0:26:7.39:7,0,235	0/1:21,0:21:36.38:36,0,62	0/1:15,0:15:7.16:7,0,141
chr10	77712545	.	T	TG	6270.73	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-15.619;DP=707;FS=10.561;HRun=7;HaplotypeScore=68.4856;InbreedingCoeff=0.9983;MQ=93.42;MQ0=0;MQRankSum=-2.192;QD=28.25;ReadPosRankSum=1.374;VQSLOD=5.1388;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,120,1151	0/0:14,0:14:39.06:0,39,377	0/0:33,0:33:78.07:0,78,740	0/0:34,0:34:71.99:0,72,668	1/1:0,19:19:48.58:564,49,0	1/1:5,15:20:42.13:507,42,0	1/1:7,22:29:63.19:761,63,0	1/1:7,18:25:54.05:618,54,0	0/0:27,0:27:72.10:0,72,690	0/0:24,0:24:63.09:0,63,604	0/0:16,0:16:45.07:0,45,434	0/0:25,0:25:69.09:0,69,661	0/0:19,0:19:54.09:0,54,521	0/0:30,0:30:69.10:0,69,666	1/1:2,25:27:69.21:834,69,0	1/1:3,14:18:19.04:493,19,0	1/1:3,31:34:84.26:1015,84,0	1/1:1,28:29:81.25:972,81,0	0/0:19,0:19:42.06:0,42,401	0/0:18,0:18:45.06:0,45,435	0/0:44,0:44:99:0,126,1210	0/0:23,0:23:57.06:0,57,542	0/0:17,0:17:45.01:0,45,425	0/0:32,0:32:81.08:0,81,773	1/1:3,18:21:42.13:507,42,0	0/0:27,0:27:69.11:0,69,666	0/0:30,0:30:81.12:0,81,782	0/0:7,0:7:21.02:0,21,197
chr10	77714888	.	G	GT	4019.68	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=2.483;DP=534;FS=9.527;HRun=7;HaplotypeScore=93.8764;InbreedingCoeff=0.8576;MQ=57.62;MQ0=45;MQRankSum=-4.128;QD=17.63;ReadPosRankSum=0.827;VQSLOD=2.6756;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:17:14.47:0,14,144	0/0:5,0:5:9.01:0,9,87	0/0:46,0:20:22.24:0,22,346	0/1:58,0:18:16.71:17,0,135	1/1:6,14:19:39.12:471,39,0	1/1:3,14:16:38.60:439,39,0	1/1:4,12:14:33.10:390,33,0	1/1:7,26:32:72.20:857,72,0	0/0:17,0:17:38.40:0,38,376	0/0:21,0:18:54.09:0,54,521	0/0:13,0:13:33.05:0,33,318	0/0:9,0:7:11.76:0,12,116	0/0:9,0:7:15.02:0,15,141	0/0:7,0:6:18.03:0,18,174	1/1:8,14:21:48.13:565,48,0	1/1:4,10:13:4.06:313,4,0	1/1:13,13:25:42.13:499,42,0	0/0:14,0:13:18.83:0,19,193	0/0:23,0:14:14.69:0,15,144	0/0:18,0:16:17.70:0,18,155	0/0:12,0:9:17.85:0,18,169	0/0:9,0:7:17.70:0,18,167	0/0:12,0:11:20.75:0,21,202	0/0:9,0:6:12.02:0,12,116	1/1:8,13:19:39.12:470,39,0	0/0:17,0:17:23.70:0,24,231	0/0:21,0:19:33.05:0,33,318	0/0:25,0:18:26.13:0,26,225
chr10	77715890	.	AAG	A	12219.01	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=12.766;DP=836;FS=3.630;HRun=0;HaplotypeScore=116.6217;InbreedingCoeff=0.9951;MQ=63.52;MQ0=8;MQRankSum=1.801;QD=24.39;ReadPosRankSum=2.203;VQSLOD=5.8725;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:84.24:0,84,1324	1/1:2,9:11:17.82:208,18,0	0/0:42,0:22:41.95:0,42,559	0/0:67,0:29:41.81:0,42,593	1/1:6,28:34:81.11:944,81,0	1/1:8,19:26:69.22:862,69,0	1/1:5,25:30:47.64:599,48,0	1/1:13,33:46:89.94:1056,90,0	0/0:17,0:17:39.13:0,39,628	1/1:10,30:40:86.31:1056,86,0	1/1:6,30:35:81.05:922,81,0	0/0:17,0:17:35.95:0,36,559	0/0:23,0:23:60.21:0,60,987	0/0:18,0:18:45.14:0,45,712	1/1:3,20:23:36.12:450,36,0	1/1:1,24:25:45:563,45,0	1/1:8,21:28:20.94:487,21,0	1/1:3,10:13:21.80:237,22,0	1/1:5,13:15:33.06:394,33,0	1/1:6,34:40:99:1202,99,0	1/1:4,26:30:60.19:751,60,0	0/0:34,0:33:81.21:0,81,1270	0/0:33,0:33:93.29:0,93,1482	0/0:45,0:45:99:0,117,1868	1/1:1,20:21:48.11:583,48,0	1/1:9,27:35:77.95:931,78,0	1/1:6,27:32:63.20:785,63,0	1/1:2,7:8:15.05:188,15,0
chr10	77716066	.	C	CA	27534.13	PASS	AB=0.961;AC=53;AF=0.946;AN=56;BaseQRankSum=-12.400;DP=820;FS=0.000;HRun=1;HaplotypeScore=106.1809;InbreedingCoeff=0.6499;MQ=78.83;MQ0=8;MQRankSum=-2.198;QD=36.37;ReadPosRankSum=7.580;VQSLOD=3.9219;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:66.22:1054,66,0	1/1:0,9:9:27.09:432,27,0	0/0:61,2:33:42.56:0,43,559	0/1:115,4:58:21.40:21,0,747	1/1:0,28:28:78.27:1247,78,0	1/1:1,24:25:69.24:1103,69,0	1/1:0,28:28:78.27:1246,78,0	1/1:2,34:33:90.25:1388,90,0	1/1:0,14:14:42.14:671,42,0	1/1:0,24:24:72.25:1151,72,0	1/1:0,18:18:48.16:767,48,0	1/1:1,18:19:51.17:815,51,0	1/1:0,34:34:93.32:1483,93,0	1/1:0,20:20:53.93:861,54,0	1/1:0,28:28:78.27:1247,78,0	1/1:0,22:22:63.21:1007,63,0	1/1:0,37:37:99:1631,103,0	1/1:2,10:12:25.37:429,25,0	1/1:1,25:23:63.21:1006,63,0	1/1:0,38:38:99:1775,111,0	1/1:1,29:29:78.27:1247,78,0	1/1:0,22:22:60.15:959,60,0	1/1:0,26:26:75.26:1199,75,0	1/1:3,22:25:69.13:1102,69,0	1/1:0,18:18:48.16:767,48,0	1/1:0,24:24:72.25:1152,72,0	1/1:1,25:26:68.91:1103,69,0	1/1:1,18:19:42.14:671,42,0
chr10	77716145	.	GGA	G	1480.17	PASS	AB=0.980;AC=22;AF=0.407;AN=54;BaseQRankSum=2.030;DP=589;FS=12.096;HRun=0;HaplotypeScore=139.2872;InbreedingCoeff=0.4353;MQ=62.47;MQ0=14;MQRankSum=-2.572;QD=5.18;ReadPosRankSum=0.741;VQSLOD=1.9441;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:8.63:0,9,114	1/1:9,0:9:2.97:20,3,0	./.	0/0:30,0:18:0.47:0,0,1	0/0:22,0:21:6:0,6,55	0/1:23,0:23:0.79:1,0,77	0/0:30,0:30:11.25:0,11,86	0/0:33,0:31:4.96:0,5,21	0/0:16,0:15:17.60:0,18,222	1/1:18,5:22:31.61:288,32,0	1/1:13,3:15:23.66:204,24,0	0/0:14,1:15:9.15:0,9,235	0/0:16,0:15:11.93:0,12,146	0/1:24,0:24:69.69:70,0,183	0/1:34,0:34:19.19:19,0,104	0/1:19,0:19:3.02:3,0,122	0/0:26,0:25:23.29:0,23,174	0/0:20,0:21:20.98:0,21,205	0/1:13,2:14:55.81:58,0,56	1/1:24,3:27:3:243,3,0	1/1:17,0:15:9.57:80,10,0	0/0:26,0:24:19.80:0,20,164	0/1:15,0:15:16.52:17,0,136	0/0:19,0:19:12.19:0,12,255	0/0:16,0:16:8.15:0,8,54	1/1:26,1:24:39.68:326,40,0	1/1:25,0:24:28.48:252,28,0	1/1:12,0:12:11.34:79,11,0
chr10	77716179	.	AAAGAGAG	A	1171.14	PASS	AB=0.940;AC=11;AF=0.196;AN=56;BaseQRankSum=5.903;DP=626;FS=10.693;HRun=0;HaplotypeScore=203.3335;InbreedingCoeff=0.0313;MQ=54.88;MQ0=27;MQRankSum=3.023;QD=5.94;ReadPosRankSum=1.469;VQSLOD=1.5803;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:46.21:0,46,764	1/1:5,1:6:5.08:21,5,0	0/1:14,0:3:0.15:0,0,52	0/0:26,0:12:17.04:0,17,140	0/0:25,0:24:44.94:0,45,419	0/0:20,0:19:49.88:0,50,545	0/0:26,0:25:42.08:0,42,548	0/0:34,0:30:60.62:0,61,667	0/0:22,0:21:63.22:0,63,1424	0/1:27,1:27:99:187,0,109	0/1:20,2:21:2.14:128,0,2	0/0:21,0:20:51.54:0,52,1261	0/0:19,0:18:51.14:0,51,1085	0/0:21,0:21:53.36:0,53,1146	0/0:25,0:25:56.09:0,56,613	0/0:17,0:17:30.04:0,30,485	0/0:27,0:26:69.12:0,69,913	0/0:26,0:26:14.84:0,15,750	0/1:20,0:16:34.82:35,0,112	0/1:24,4:27:35.62:52,0,36	0/1:18,0:15:24.27:74,0,24	0/0:31,0:31:69.81:0,70,1335	0/0:19,0:18:36.82:0,37,623	0/0:26,0:25:59.48:0,59,1687	0/0:22,0:21:30.12:0,30,404	0/1:20,3:21:57.91:411,0,58	0/1:21,3:21:17.14:322,0,17	0/1:13,1:13:66.53:83,0,67
chr10	77716180	.	AAGAGAG	A	4375	PASS	AB=0.993;AC=22;AF=0.393;AN=56;BaseQRankSum=2.444;DP=638;FS=2.223;HRun=0;HaplotypeScore=185.7089;InbreedingCoeff=0.6452;MQ=55.54;MQ0=26;MQRankSum=0.594;QD=15.35;ReadPosRankSum=-2.792;VQSLOD=3.8597;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:33.08:0,33,484	1/1:6,0:6:8.92:105,9,0	0/0:18,0:4:7.97:0,8,36	0/0:28,0:13:3.63:0,4,50	0/0:25,0:24:10.26:0,10,147	0/0:20,0:19:14.18:0,14,273	0/0:25,0:26:12.95:0,13,207	0/1:33,0:30:39.44:39,0,101	0/0:22,0:21:57.18:0,57,988	1/1:28,0:27:44.76:727,45,0	1/1:23,0:22:29.85:451,30,0	0/0:19,0:19:39.60:0,40,921	0/0:19,0:18:41.02:0,41,738	0/0:21,0:21:37.37:0,37,784	0/0:24,0:24:14.45:0,14,294	0/1:17,0:17:35.90:36,0,225	0/0:27,0:26:23.18:0,23,475	0/1:25,0:26:31.77:32,0,514	1/1:12,7:15:21.36:297,21,0	1/1:28,0:27:26.56:425,27,0	1/1:18,0:15:18.28:280,18,0	0/0:34,0:34:62.41:0,62,1002	0/0:19,0:18:26.71:0,27,402	0/0:26,0:25:54.18:0,54,1265	0/1:22,0:21:16.94:17,0,113	1/1:24,0:23:44.87:783,45,0	1/1:26,0:23:46.44:795,46,0	1/1:14,0:13:24.07:388,24,0
chr10	77718912	.	AAC	A	248.56	PASS	AB=0.983;AC=12;AF=0.353;AN=34;BaseQRankSum=-0.335;DP=489;FS=2.256;HRun=0;HaplotypeScore=78.0258;InbreedingCoeff=-0.3738;MQ=55.48;MQ0=29;MQRankSum=1.931;QD=1.17;ReadPosRankSum=-1.420;VQSLOD=1.4922;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:25:14:34,0,14	./.	./.	./.	0/0:15,0:15:6:0,6,67	0/1:17,0:17:2.05:2,0,94	0/0:32,0:30:6.48:0,6,72	./.	0/1:13,0:13:24.50:24,0,37	./.	./.	0/1:10,0:10:13.64:14,0,78	0/1:17,0:16:16.15:16,0,21	0/1:21,0:20:45.80:119,0,46	0/0:14,0:13:15.01:0,15,151	0/0:9,0:9:1.25:0,1,3	0/1:26,0:28:13.60:14,0,261	0/0:17,0:16:9.53:0,10,64	./.	1/1:7,0:11:2.84:14,3,0	./.	0/1:20,4:23:19.36:19,0,100	0/1:8,0:7:22.27:22,0,43	0/1:35,1:35:83.55:84,0,154	0/0:18,0:18:3:0,3,28	./.	./.	./.
chr10	77719318	.	C	CTTTTT	2714.81	PASS	AB=0.592;AC=28;AF=0.500;AN=56;BaseQRankSum=6.054;DP=626;FS=0.359;HRun=11;HaplotypeScore=136.4287;InbreedingCoeff=0.4231;MQ=66.19;MQ0=1;MQRankSum=-1.901;QD=6.70;ReadPosRankSum=-2.998;VQSLOD=-0.2509;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:47:99:0,105,1574	1/1:0,0:10:19.08:106,19,0	0/0:12,0:12:17.92:0,18,321	0/0:11,0:11:17.05:0,17,230	0/1:11,0:27:10.07:339,0,10	0/1:3,0:16:59.23:59,0,73	0/1:10,0:33:99:151,0,143	1/1:14,0:27:27.06:172,27,0	0/0:18,0:21:48.01:0,48,693	1/1:11,0:32:33.32:299,33,0	1/1:6,0:19:25.35:188,25,0	0/0:22,0:25:59.99:0,60,868	0/0:13,0:14:32.94:0,33,488	0/0:18,0:22:44.83:0,45,649	1/1:5,0:23:20.97:138,21,0	1/1:6,0:11:12.66:78,13,0	0/1:4,0:28:56.42:87,0,56	1/1:9,4:21:26.76:531,27,0	0/1:9,0:17:93.54:94,0,127	0/1:8,0:18:20.03:59,0,20	0/1:8,0:39:35.99:129,0,36	0/0:27,0:28:74.60:0,75,1096	0/0:19,0:19:38.73:0,39,605	0/0:21,0:22:60.10:0,60,895	0/1:4,0:24:73.35:75,0,73	1/1:8,0:25:27.28:160,27,0	1/1:2,0:19:21.63:168,22,0	1/1:4,0:13:12.57:90,13,0
chr10	77719574	.	C	CG	951.80	PASS	AB=0.988;AC=21;AF=0.375;AN=56;BaseQRankSum=13.311;DP=578;FS=1.453;HRun=2;HaplotypeScore=84.6006;InbreedingCoeff=-0.0924;MQ=73.57;MQ0=0;MQRankSum=-1.588;QD=2.60;ReadPosRankSum=3.911;VQSLOD=-0.2055;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:92.95:0,93,1059	0/1:9,0:9:21.57:32,0,22	0/0:20,0:18:25.35:0,25,240	0/0:17,0:16:19.46:0,19,287	0/1:25,1:26:60.78:102,0,61	0/1:17,1:18:28.11:79,0,28	0/1:16,0:16:35.06:35,0,40	0/1:19,0:19:5.88:6,0,127	0/0:16,0:16:45.10:0,45,497	1/1:21,0:21:7.08:66,7,0	1/1:8,1:9:16.55:82,17,0	0/0:20,0:20:53.90:0,54,630	0/0:15,0:15:38.90:0,39,445	0/0:20,0:20:52.60:0,53,654	0/1:13,0:13:23.55:24,0,41	0/1:22,0:22:54.56:55,0,95	0/1:32,0:32:64.96:65,0,99	1/1:28,0:28:19.63:98,20,0	0/1:25,0:25:25.45:25,0,169	0/1:18,0:18:38.65:39,0,79	0/1:19,0:19:32.73:33,0,79	0/0:21,1:22:53.75:0,54,643	0/0:18,0:18:54.09:0,54,619	0/0:29,0:29:81.23:0,81,984	0/1:19,0:19:51.58:64,0,52	0/1:26,1:27:0.82:142,0,1	0/1:26,0:26:7.85:106,0,8	0/1:18,1:19:73.54:74,0,86
chr10	77719576	.	G	GT	7792.74	PASS	AB=0.666;AC=34;AF=0.607;AN=56;BaseQRankSum=-11.445;DP=586;FS=3.018;HRun=10;HaplotypeScore=63.0948;InbreedingCoeff=0.6990;MQ=72.76;MQ0=0;MQRankSum=-1.377;QD=19.93;ReadPosRankSum=0.885;VQSLOD=5.8069;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:89.73:0,90,724	0/1:1,7:8:0.57:187,0,1	0/0:20,0:18:7.28:0,7,152	0/1:16,1:16:22.53:23,0,131	1/1:5,21:27:13.79:531,14,0	1/1:4,13:17:14.46:359,14,0	1/1:3,14:17:30.08:320,30,0	1/1:7,11:19:27.04:272,27,0	0/0:15,0:15:32.96:0,33,271	1/1:2,18:20:54.08:554,54,0	1/1:2,7:10:26.93:269,27,0	0/0:20,0:20:50.90:0,51,414	0/0:13,0:13:32.96:0,33,271	0/0:20,1:21:21.92:0,22,387	1/1:3,10:14:2.45:224,2,0	1/1:5,18:23:29.51:519,30,0	1/1:6,27:33:35.47:571,35,0	1/1:1,23:24:60.12:628,60,0	1/1:9,16:26:4.57:428,5,0	0/1:5,12:17:22.34:320,0,22	1/1:6,13:20:14.42:347,14,0	0/0:23,1:24:27.89:0,28,429	0/0:18,0:19:52.96:0,53,422	0/0:28,0:28:77.90:0,78,640	1/1:3,18:21:23.46:447,23,0	1/1:4,23:28:72.13:748,72,0	1/1:2,22:26:65.92:664,66,0	0/1:8,16:24:1.20:382,0,1
chr10	77721234	.	G	GGATAGATA	11783.53	PASS	AB=0.629;AC=37;AF=0.661;AN=56;BaseQRankSum=2.690;DP=583;FS=1.738;HRun=0;HaplotypeScore=165.3180;InbreedingCoeff=0.8165;MQ=63.09;MQ0=5;MQRankSum=-5.651;QD=28.74;ReadPosRankSum=-2.443;VQSLOD=4.4744;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:51.18:0,51,1259	1/1:3,0:7:8.99:76,9,0	0/0:21,0:16:5.85:0,6,70	0/0:24,0:22:6.02:0,6,132	1/1:17,6:27:8.37:270,8,0	1/1:9,0:28:48.37:394,48,0	1/1:8,0:16:20.95:171,21,0	1/1:34,0:34:45.13:944,45,0	0/0:17,0:17:33.11:0,33,762	1/1:18,12:31:54.17:2007,54,0	1/1:14,12:29:27.07:978,27,0	0/0:14,0:14:36.12:0,36,901	0/0:24,0:24:39.12:0,39,895	1/1:13,5:18:18.06:733,18,0	1/1:6,0:14:11.97:98,12,0	1/1:9,0:15:20.33:155,20,0	1/1:16,0:32:26.80:411,27,0	1/1:10,0:13:7.58:213,8,0	1/1:15,5:20:24.08:879,24,0	1/1:8,12:22:36.12:1443,36,0	1/1:13,0:13:2.90:66,3,0	0/0:18,0:18:36.11:0,36,850	0/0:11,0:11:21.06:0,21,474	0/0:12,0:13:12.04:0,12,257	0/1:9,0:22:42.08:211,0,42	1/1:18,7:26:33.11:1198,33,0	1/1:20,8:29:21.07:799,21,0	1/1:3,9:12:18.06:737,18,0
chr10	77721799	.	T	TA	933.47	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.294;DP=682;FS=4.118;HRun=1;HaplotypeScore=62.4954;InbreedingCoeff=0.9986;MQ=84.92;MQ0=0;MQRankSum=-0.318;QD=37.34;ReadPosRankSum=-4.240;VQSLOD=2.2767;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1349	0/0:13,0:13:33.11:0,33,428	0/0:26,0:26:72.18:0,72,864	0/0:17,0:17:45.08:0,45,549	0/0:29,0:29:84.23:0,84,1046	0/0:15,0:15:45.15:0,45,583	0/0:26,0:26:78.25:0,78,1011	1/1:1,24:25:72.22:1028,72,0	0/0:27,0:27:81.26:0,81,1051	0/0:24,0:24:69.22:0,69,885	0/0:26,0:26:75.23:0,75,959	0/0:40,0:40:99:0,120,1528	0/0:21,0:21:60.18:0,60,765	0/0:32,0:32:96.30:0,96,1230	0/0:27,0:27:81.26:0,81,1050	0/0:26,0:26:72.22:0,72,920	0/0:25,0:24:72.23:0,72,932	0/0:13,0:13:39.13:0,39,506	0/0:17,0:17:48.16:0,48,622	0/0:30,0:30:90.28:0,90,1154	0/0:33,0:33:99:0,99,1221	0/0:21,0:21:63.19:0,63,803	0/0:22,0:22:66.21:0,66,855	0/0:19,0:19:57.13:0,57,707	0/0:30,0:30:84.16:0,84,1036	0/0:25,0:25:75.24:0,75,973	0/0:27,0:27:78.25:0,78,1012	0/0:10,0:10:27.09:0,27,350
chr10	77721899	.	AC	A	2783.30	PASS	AB=0.922;AC=42;AF=0.750;AN=56;BaseQRankSum=-2.854;DP=446;FS=1.544;HRun=12;HaplotypeScore=79.9367;InbreedingCoeff=0.2597;MQ=76.17;MQ0=1;MQRankSum=1.394;QD=7.31;ReadPosRankSum=3.089;VQSLOD=2.6499;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,2:23:19.12:19,0,116	0/0:5,0:5:2.97:0,3,20	0/0:32,0:22:8:0,8,121	0/0:18,1:15:0.17:0,0,56	1/1:13,1:14:15.18:123,15,0	1/1:7,10:18:26.88:207,27,0	1/1:9,11:20:6:123,6,0	1/1:20,4:24:31.09:168,31,0	1/1:12,4:16:33.12:218,33,0	0/1:23,1:24:5.05:84,0,5	1/1:13,0:13:1.43:46,1,0	1/1:11,3:14:26.50:187,26,0	1/1:12,1:13:0.67:125,1,0	1/1:10,0:10:16.13:103,16,0	1/1:6,6:12:11.44:78,11,0	1/1:11,8:19:39.07:272,39,0	1/1:8,22:30:56.73:433,57,0	0/0:3,0:7:5.82:0,6,36	0/1:6,7:13:0.39:76,0,0	0/1:15,0:15:2.83:65,0,3	1/1:8,1:9:3.64:57,4,0	1/1:7,12:19:22.63:158,23,0	1/1:6,9:15:4.35:32,4,0	1/1:4,11:16:15.29:113,15,0	1/1:11,3:14:25.89:177,26,0	1/1:13,0:13:9.58:45,10,0	0/1:8,0:8:16.45:16,0,31	0/1:9,0:9:5.14:5,0,25
chr10	77723036	.	C	CTCTCTAT	19350.05	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=12.025;DP=585;FS=17.613;HRun=0;HaplotypeScore=164.8410;InbreedingCoeff=0.9899;MQ=73.68;MQ0=1;MQRankSum=-14.265;QD=56.25;ReadPosRankSum=-2.246;VQSLOD=3.2991;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.17:0,72,1519	0/0:7,0:7:18.03:0,18,350	0/0:18,0:14:30.51:0,31,506	0/0:29,0:27:43.42:0,43,852	1/1:20,14:34:66.54:1548,67,0	1/1:6,11:18:48.04:1559,48,0	1/1:8,5:13:23.01:640,23,0	1/1:28,6:34:71.88:1185,72,0	0/0:27,0:27:69.15:0,69,1478	1/1:12,10:22:60.03:1639,60,0	1/1:20,4:24:33.76:810,34,0	0/0:25,0:25:51.13:0,51,1103	0/0:18,0:18:45.12:0,45,1028	1/1:4,6:10:26.98:797,27,0	1/1:12,8:20:39.02:1141,39,0	1/1:7,5:12:32.90:805,33,0	1/1:9,3:12:23.46:730,23,0	0/0:20,0:20:57.09:0,57,1333	1/1:10,2:12:33:653,33,0	1/1:16,6:22:50.73:1020,51,0	1/1:9,0:9:9.32:254,9,0	0/0:17,0:17:48.11:0,48,979	0/0:27,0:27:78.20:0,78,1752	0/0:25,0:25:72.19:0,72,1655	1/1:17,13:30:62.05:1761,62,0	1/1:12,9:21:59.95:1459,60,0	1/1:22,16:39:98.91:2458,99,0	1/1:7,5:12:32.97:891,33,0
chr10	77723053	.	CCTT	C	7952.18	PASS	AB=0.714;AC=33;AF=0.589;AN=56;BaseQRankSum=15.666;DP=543;FS=10.029;HRun=0;HaplotypeScore=133.5180;InbreedingCoeff=0.9180;MQ=61.07;MQ0=23;MQRankSum=-14.247;QD=27.42;ReadPosRankSum=0.699;VQSLOD=4.8964;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:41.32:0,41,924	0/0:6,0:6:18.06:0,18,308	0/0:22,0:10:26.81:0,27,437	0/0:26,0:19:43.99:0,44,758	1/1:2,26:27:51.85:563,52,0	1/1:3,14:16:39.12:466,39,0	1/1:2,12:13:21.32:227,21,0	1/1:0,24:24:63.21:924,63,0	0/0:30,0:30:81.13:0,81,1273	1/1:0,17:17:51.17:702,51,0	1/1:1,17:18:40.06:404,40,0	0/0:22,0:22:63.21:0,63,1052	0/0:18,0:18:54.18:0,54,880	1/1:0,8:8:21.06:245,21,0	1/1:0,17:17:36.11:427,36,0	1/1:0,8:8:21.07:254,21,0	1/1:3,7:9:21.07:259,21,0	0/0:26,0:25:74.97:0,75,1098	1/1:4,12:12:36.12:524,36,0	1/1:5,12:17:11.75:497,12,0	0/1:6,4:9:24.69:111,0,25	0/0:18,0:18:54.17:0,54,884	0/0:27,0:27:81.26:0,81,1298	0/0:33,0:27:75.25:0,75,1237	1/1:1,31:31:60.56:697,61,0	1/1:2,17:17:48.10:628,48,0	1/1:2,22:22:60.19:732,60,0	1/1:6,5:10:23.20:292,23,0
chr10	77723173	.	TTCC	T	2427.43	PASS	AB=0.930;AC=23;AF=0.411;AN=56;BaseQRankSum=11.477;DP=493;FS=0.403;HRun=0;HaplotypeScore=79.9677;InbreedingCoeff=0.1840;MQ=49.06;MQ0=61;MQRankSum=-3.282;QD=9.23;ReadPosRankSum=3.306;VQSLOD=2.4940;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:16:40.36:0,40,319	0/0:8,0:8:15.33:0,15,116	0/0:29,0:11:7.41:0,7,180	0/0:32,0:14:26.54:0,27,281	0/1:4,8:10:2.05:57,0,2	0/1:17,0:16:4.30:206,0,4	0/1:15,0:11:11.77:12,0,16	0/1:8,12:20:52.71:217,0,53	0/0:24,0:23:52.37:0,52,488	0/1:8,0:8:24.60:56,0,25	1/1:11,0:9:1.82:101,2,0	0/0:23,0:20:56.84:0,57,477	0/0:25,0:21:59.84:0,60,506	1/1:13,0:11:26.66:184,27,0	1/1:24,0:22:54.52:396,55,0	0/1:21,0:20:15.79:186,0,16	0/1:13,0:10:16.55:73,0,17	0/0:12,0:9:23.96:0,24,200	1/1:5,0:4:8.01:61,8,0	0/1:21,0:20:34.27:116,0,34	1/1:12,0:11:29.05:204,29,0	0/0:19,0:12:32.55:0,33,265	0/0:10,0:7:3.93:0,4,130	0/0:27,0:20:38.86:0,39,378	0/1:8,0:8:22.96:47,0,23	0/1:26,0:23:18.44:288,0,18	1/1:27,0:26:20.01:356,20,0	0/1:10,0:6:11.71:50,0,12
chr10	77723176	.	C	CCCTTCT	9081.47	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=4.077;DP=484;FS=3.843;HRun=0;HaplotypeScore=86.3758;InbreedingCoeff=0.9072;MQ=51.67;MQ0=35;MQRankSum=-5.962;QD=35.20;ReadPosRankSum=1.729;VQSLOD=4.2372;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:16:39.11:0,39,746	0/0:9,0:9:11.99:0,12,252	0/0:34,0:16:3.04:0,3,402	0/0:35,0:15:25.85:0,26,561	1/1:10,0:10:12.04:221,12,0	1/1:17,0:16:39.12:777,39,0	1/1:6,9:14:6.02:115,6,0	1/1:21,0:21:42.09:757,42,0	0/0:23,0:23:60.16:0,60,1111	1/1:8,0:8:12.04:223,12,0	1/1:10,0:9:18.06:402,18,0	0/0:21,0:20:54.18:0,54,1104	0/0:24,0:21:60.12:0,60,1046	1/1:14,0:12:30.09:582,30,0	1/1:23,0:22:63.05:1168,63,0	1/1:20,0:20:36.12:712,36,0	1/1:14,0:12:3.51:309,4,0	0/0:11,0:9:21.04:0,21,403	1/1:5,0:4:12.04:230,12,0	1/1:19,0:19:21.03:447,21,0	1/1:10,0:11:21.67:413,22,0	0/0:14,0:12:24.08:0,24,517	0/0:9,0:9:21.02:0,21,309	0/0:27,0:21:54.10:0,54,994	1/1:8,0:8:12.04:241,12,0	1/1:24,0:23:51.13:991,51,0	1/1:27,0:26:68.34:1223,68,0	1/1:9,0:6:12.04:271,12,0
chr10	77724939	.	A	AT	1698.93	PASS	AB=0.819;AC=15;AF=0.268;AN=56;BaseQRankSum=-7.256;DP=563;FS=2.714;HRun=13;HaplotypeScore=73.4250;InbreedingCoeff=0.5686;MQ=71.17;MQ0=0;MQRankSum=-0.873;QD=8.25;ReadPosRankSum=-3.415;VQSLOD=2.1211;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:28:53.71:0,54,340	0/0:8,0:8:20.83:0,21,144	0/0:16,0:13:15.98:0,16,125	0/1:15,0:11:13.29:13,0,55	0/0:23,0:26:29.69:0,30,298	0/1:8,11:21:4.42:167,0,4	1/1:6,15:21:15.66:287,16,0	1/1:12,20:32:40.35:502,40,0	0/0:19,0:19:44.57:0,45,308	0/0:16,0:18:28.09:0,28,177	0/0:11,0:12:31.76:0,32,210	0/0:12,0:14:17.92:0,18,111	0/0:24,0:27:18.53:0,19,219	0/0:20,0:20:20.56:0,21,144	0/1:5,20:27:36.49:186,0,36	1/1:4,7:11:15.02:139,15,0	1/1:6,13:21:11.97:218,12,0	0/0:22,0:23:49.52:0,50,332	0/0:20,0:25:13.02:0,13,175	0/1:22,4:26:31.98:32,0,304	0/1:14,0:14:2.49:2,0,102	0/0:12,0:15:24.80:0,25,156	0/0:20,0:20:19.18:0,19,156	0/0:14,2:17:9.87:0,10,204	1/1:3,15:18:36.04:334,36,0	0/0:18,2:21:15.24:0,15,239	0/0:30,0:35:20.27:0,20,226	0/0:12,0:12:14.77:0,15,103
chr10	77725585	.	AAGAG	A	193.81	PASS	AB=1.000;AC=12;AF=0.250;AN=48;BaseQRankSum=1.516;DP=493;FS=16.860;HRun=0;HaplotypeScore=92.5420;InbreedingCoeff=0.4763;MQ=67.04;MQ0=11;MQRankSum=1.176;QD=1.83;ReadPosRankSum=-1.489;VQSLOD=0.5299;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:11.99:0,12,130	0/0:6,0:6:6:0,6,92	./.	./.	0/0:17,0:17:5.70:0,6,66	0/0:27,0:27:12.51:0,13,232	0/0:25,0:24:9.02:0,9,136	0/0:27,0:26:1.82:0,2,5	1/1:16,1:17:3.01:46,3,0	0/0:20,0:19:16.61:0,17,212	0/0:10,0:10:6.01:0,6,89	0/1:14,0:14:0.01:0,0,0	0/0:13,0:17:2.94:0,3,18	0/0:20,0:20:18.53:0,19,300	1/1:11,0:11:0.47:1,0,0	0/0:12,0:12:0:0,0,0	0/0:16,0:16:12.49:0,12,191	0/1:6,0:6:7.42:7,0,164	./.	0/0:19,0:19:3.01:0,3,68	0/0:15,0:15:19.85:0,20,320	1/1:22,0:22:3.01:44,3,0	1/1:13,0:13:3.01:33,3,0	1/1:19,3:23:17.67:185,18,0	0/0:10,0:10:6.02:0,6,106	0/0:23,0:23:15.35:0,15,129	0/0:23,0:22:18.05:0,18,283	./.
chr10	77726298	.	TATCA	T	8991.61	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=13.107;DP=593;FS=37.720;HRun=0;HaplotypeScore=91.5389;InbreedingCoeff=0.9867;MQ=71.86;MQ0=0;MQRankSum=1.145;QD=25.99;ReadPosRankSum=2.669;VQSLOD=2.7260;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.27:0,96,2172	0/0:5,0:5:15.03:0,15,273	0/0:32,0:30:68.95:0,69,1050	0/0:27,0:24:38.75:0,39,767	1/1:4,15:19:30.10:490,30,0	1/1:2,25:27:33.10:557,33,0	1/1:3,17:20:30.10:506,30,0	1/1:6,13:19:39.02:493,39,0	0/0:19,0:19:54.17:0,54,1287	1/1:3,27:30:78.14:1113,78,0	1/1:2,10:12:12.04:189,12,0	0/0:23,0:23:54.14:0,54,1195	0/0:33,0:33:93.25:0,93,2014	1/1:3,15:18:18.06:304,18,0	1/1:1,16:17:30.10:506,30,0	1/1:3,16:19:27.09:456,27,0	1/1:3,16:19:33.11:557,33,0	0/0:16,0:16:42.11:0,42,940	1/1:6,11:17:33.07:483,33,0	1/1:6,12:18:27.09:456,27,0	1/1:2,30:32:42.14:709,42,0	0/0:12,0:12:30:0,30,588	0/0:22,0:22:48.15:0,48,1066	0/0:23,0:23:57.12:0,57,1166	1/1:1,20:21:33.11:557,33,0	1/1:2,23:25:69.14:1010,69,0	1/1:3,15:18:24.08:405,24,0	1/1:2,13:15:12.04:203,12,0
chr10	77729412	.	A	AC	10950.38	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=8.571;DP=596;FS=4.390;HRun=6;HaplotypeScore=77.8610;InbreedingCoeff=0.9983;MQ=81.29;MQ0=0;MQRankSum=-1.355;QD=30.50;ReadPosRankSum=1.275;VQSLOD=5.4828;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,114,1161	0/0:13,0:13:39.09:0,39,398	0/0:20,0:19:33.04:0,33,378	0/0:20,0:20:38.19:0,38,342	1/1:0,24:24:60.19:754,60,0	1/1:2,27:29:72.23:906,72,0	1/1:4,23:27:23.59:611,24,0	1/1:4,14:18:39.11:484,39,0	0/0:23,0:23:63.14:0,63,642	1/1:0,20:20:54.17:677,54,0	1/1:2,10:13:24.03:283,24,0	0/0:25,0:25:66.15:0,66,673	0/0:14,0:14:39.09:0,39,397	1/1:1,19:20:54.17:679,54,0	1/1:0,19:19:51.16:637,51,0	1/1:2,15:17:42.13:528,42,0	1/1:4,24:28:78.23:958,78,0	0/0:12,0:12:33.07:0,33,336	1/1:1,18:19:54.07:628,54,0	1/1:1,19:20:57.17:701,57,0	1/1:3,28:31:47.85:913,48,0	0/0:11,0:11:27.06:0,27,275	0/0:20,0:20:51.10:0,51,513	0/0:33,0:33:90.20:0,90,918	1/1:2,14:16:30.10:377,30,0	1/1:3,14:17:44.81:539,45,0	1/1:1,30:31:78.25:981,78,0	1/1:1,8:10:20.14:295,20,0
chr10	77730448	.	AT	A	6697.10	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=16.439;DP=498;FS=25.219;HRun=8;HaplotypeScore=173.4167;InbreedingCoeff=0.9666;MQ=70.09;MQ0=1;MQRankSum=-15.230;QD=21.89;ReadPosRankSum=-1.225;VQSLOD=2.3991;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:75.18:0,75,878	0/0:11,0:11:27.08:0,27,326	0/0:14,0:14:3.76:0,4,297	0/0:11,1:11:14.76:0,15,163	1/1:6,17:23:53.12:493,53,0	1/1:1,18:19:54.09:516,54,0	1/1:4,10:14:30.03:284,30,0	1/1:5,21:26:57.08:545,57,0	0/0:14,0:14:33.10:0,33,399	1/1:8,14:21:48.07:457,48,0	1/1:1,14:15:38.72:350,39,0	0/0:19,0:19:57.17:0,57,679	0/0:13,0:13:36.11:0,36,435	1/1:2,8:10:24.03:229,24,0	1/1:2,14:16:42.06:400,42,0	1/1:4,6:10:18.03:172,18,0	1/1:3,20:23:54.08:517,54,0	0/0:21,0:20:57.17:0,57,689	1/1:5,9:14:27.04:259,27,0	1/1:3,25:28:65.61:595,66,0	1/1:1,4:5:12.02:114,12,0	0/0:18,0:18:48.15:0,48,580	0/0:12,0:12:36.11:0,36,435	0/0:29,0:29:72.21:0,72,859	1/1:4,20:24:56.88:529,57,0	1/1:3,12:14:36.06:344,36,0	1/1:1,28:29:80.87:747,81,0	1/1:5,8:13:15:145,15,0
chr10	77730458	.	CT	C	9614.28	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=17.120;DP=482;FS=27.573;HRun=3;HaplotypeScore=187.3255;InbreedingCoeff=0.9828;MQ=72.53;MQ0=1;MQRankSum=-17.084;QD=32.93;ReadPosRankSum=-1.400;VQSLOD=1.3352;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.24:0,72,1036	0/0:10,0:10:27.09:0,27,388	0/0:16,0:16:44.93:0,45,590	0/0:14,0:13:25.39:0,25,325	1/1:1,21:22:54.17:663,54,0	1/1:0,22:22:66.21:811,66,0	1/1:0,14:14:42.13:516,42,0	1/1:0,25:25:69.22:850,69,0	0/0:14,0:14:42.14:0,42,605	1/1:4,17:20:57.16:679,57,0	1/1:0,16:16:48.15:583,48,0	0/0:19,0:19:57.18:0,57,803	0/0:13,0:13:36.11:0,36,501	1/1:0,9:9:27.08:331,27,0	1/1:1,14:15:42.13:516,42,0	1/1:1,8:9:24.08:296,24,0	1/1:2,22:24:60.19:738,60,0	0/0:21,0:20:63.21:0,63,907	1/1:3,8:11:24.07:296,24,0	1/1:0,23:23:69.21:839,69,0	1/1:2,3:5:6.02:74,6,0	0/0:16,0:16:48.16:0,48,691	0/0:14,0:14:39.13:0,39,562	0/0:27,0:27:75.25:0,75,1079	1/1:2,19:21:57.18:698,57,0	1/1:0,15:14:42.13:516,42,0	1/1:2,27:29:81.25:988,81,0	1/1:5,6:11:18.06:221,18,0
chr10	77730479	.	A	ATAAAAG	31660.98	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=16.437;DP=536;FS=21.930;HRun=0;HaplotypeScore=239.6213;InbreedingCoeff=0.9860;MQ=72.77;MQ0=0;MQRankSum=-19.117;QD=98.02;ReadPosRankSum=-3.042;VQSLOD=2.8527;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.30:0,87,2094	0/0:8,0:8:18.06:0,18,443	0/0:20,0:19:54.15:0,54,1190	0/0:12,0:12:33.11:0,33,806	1/1:9,17:27:72.20:2309,72,0	1/1:1,21:21:66.23:2394,66,0	1/1:4,13:17:51.17:1757,51,0	1/1:18,12:30:87.25:2719,87,0	0/0:17,0:17:51.13:0,51,1108	1/1:4,16:20:60.12:1959,60,0	1/1:1,17:18:54.19:1933,54,0	0/0:20,0:20:57.20:0,57,1349	0/0:17,0:17:48.15:0,48,1132	1/1:5,11:16:48.16:1631,48,0	1/1:5,11:16:45.15:1544,45,0	1/1:3,7:10:30.10:998,30,0	1/1:5,19:24:63.22:2241,63,0	0/0:24,0:23:72.21:0,72,1691	1/1:5,8:13:36.05:1121,36,0	1/1:7,22:30:87.30:3081,87,0	1/1:4,2:6:12.04:373,12,0	0/0:21,0:21:63.22:0,63,1546	0/0:14,0:14:39.12:0,39,887	0/0:31,0:31:87.30:0,87,2061	1/1:5,17:22:66.23:2199,66,0	1/1:2,20:22:66.23:2339,66,0	1/1:4,20:26:75.26:2736,75,0	1/1:0,3:3:9.03:329,9,0
chr10	77730498	.	A	AGTGCGTGCGTGC	11994.56	PASS	AB=0.941;AC=34;AF=0.607;AN=56;BaseQRankSum=12.975;DP=485;FS=11.502;HRun=0;HaplotypeScore=305.7164;InbreedingCoeff=0.8635;MQ=66.21;MQ0=1;MQRankSum=-14.858;QD=42.23;ReadPosRankSum=-0.363;VQSLOD=2.8162;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,3100	0/0:10,0:10:30.10:0,30,1004	0/0:11,0:10:21.01:0,21,279	0/1:12,0:11:1.46:1,0,177	1/1:14,9:23:11.21:500,11,0	1/1:12,3:14:6.02:255,6,0	1/1:13,0:13:11.77:122,12,0	1/1:19,0:19:56.50:732,56,0	0/0:15,0:15:45.15:0,45,1630	1/1:9,8:17:48.07:1556,48,0	0/1:13,2:15:0:0,0,0	0/0:21,0:21:57.20:0,57,2011	0/0:15,0:15:42.12:0,42,1383	1/1:6,10:16:27.09:1435,27,0	1/1:6,6:12:12.04:622,12,0	1/1:7,2:9:9.03:356,9,0	1/1:19,3:22:20.60:493,21,0	0/0:22,0:21:63.22:0,63,2331	1/1:11,0:11:27.08:479,27,0	1/1:14,9:23:8.80:490,9,0	1/1:7,1:8:4.89:274,5,0	0/0:25,0:25:72.18:0,72,2225	0/0:20,0:20:54.17:0,54,1693	0/0:28,0:28:78.19:0,78,2497	1/1:12,7:19:18.06:861,18,0	1/1:13,10:23:68.49:2030,68,0	1/1:16,5:22:42.44:1145,42,0	1/1:1,4:5:15.05:644,15,0
chr10	77730506	.	C	CATACGT	13313.01	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=16.364;DP=607;FS=0.000;HRun=0;HaplotypeScore=386.5159;InbreedingCoeff=0.7479;MQ=57.02;MQ0=1;MQRankSum=-15.690;QD=33.28;ReadPosRankSum=0.391;VQSLOD=3.7353;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,2627	0/0:11,0:11:30.10:0,30,737	0/1:10,0:7:21.44:21,0,48	0/1:11,0:9:21.46:21,0,86	1/1:19,9:28:11.75:286,12,0	1/1:12,3:15:15.04:173,15,0	1/1:28,0:28:15.98:648,16,0	1/1:32,0:32:3.33:1611,3,0	0/0:16,0:16:48.16:0,48,1190	1/1:25,8:32:80.26:2230,80,0	1/1:17,2:19:6.34:50,6,0	0/0:22,0:22:63.17:0,63,1499	0/0:17,0:17:42.14:0,42,1066	1/1:12,11:23:34.87:911,35,0	1/1:9,6:15:18.06:375,18,0	1/1:11,2:13:4.09:490,4,0	1/1:26,3:29:3.52:701,4,0	0/0:25,0:25:72.23:0,72,1730	1/1:17,0:17:36.71:729,37,0	1/1:16,9:25:15.04:347,15,0	1/1:9,1:10:12.87:126,13,0	0/0:26,0:26:78.21:0,78,1848	0/0:20,0:20:54.19:0,54,1356	0/0:33,0:33:96.29:0,96,2232	1/1:14,7:21:24.08:462,24,0	1/1:20,10:29:55.78:1953,56,0	1/1:28,6:34:26.54:1825,27,0	1/1:3,4:7:15.05:353,15,0
chr10	77731739	.	T	TA	824.77	PASS	AB=0.782;AC=12;AF=0.214;AN=56;BaseQRankSum=8.805;DP=356;FS=11.246;HRun=1;HaplotypeScore=78.5165;InbreedingCoeff=-0.0439;MQ=65.41;MQ0=0;MQRankSum=-5.275;QD=5.89;ReadPosRankSum=3.574;VQSLOD=-0.3106;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.14:0,45,571	0/0:5,0:5:12.04:0,12,156	0/0:9,0:9:18.40:0,18,199	0/1:6,0:6:4.94:5,0,52	0/1:6,3:9:39.57:40,0,55	0/0:20,0:20:39.67:0,40,222	0/0:7,0:7:14.40:0,14,102	0/0:33,0:33:60.20:0,60,856	0/0:17,0:17:51.14:0,51,633	0/1:6,5:11:44.17:91,0,44	0/1:5,3:8:26.80:27,0,41	0/0:14,0:14:42.12:0,42,530	0/0:12,0:12:36.10:0,36,452	0/1:7,3:10:41.61:67,0,42	0/0:4,0:4:5.60:0,6,26	0/0:5,0:5:8.38:0,8,39	0/0:15,0:15:26.10:0,26,223	0/0:16,0:16:45.15:0,45,584	0/1:11,3:14:52.04:52,0,98	0/1:12,2:14:29.96:30,0,110	0/1:4,2:6:6.13:31,0,6	0/0:5,0:5:9.02:0,9,106	0/0:13,0:13:39.12:0,39,494	0/0:5,0:5:15.04:0,15,181	0/0:20,0:20:35.67:0,36,241	0/1:9,4:13:64.57:90,0,65	0/1:15,14:29:60.63:255,0,61	1/1:4,16:20:21.44:292,21,0
chr10	77731741	.	T	TTAATAA	11688.84	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=1.482;DP=372;FS=0.477;HRun=0;HaplotypeScore=75.4121;InbreedingCoeff=0.8910;MQ=66.35;MQ0=0;MQRankSum=-10.217;QD=46.57;ReadPosRankSum=-0.352;VQSLOD=4.6072;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.08:0,45,842	0/0:4,0:4:12.04:0,12,217	0/0:7,0:7:5.01:0,5,43	0/0:8,0:8:0.71:0,1,24	1/1:7,0:10:15.03:370,15,0	1/1:2,18:21:36.12:1218,36,0	1/1:1,8:9:9.03:304,9,0	1/1:21,14:37:48.15:1252,48,0	0/0:20,0:20:54.11:0,54,913	1/1:6,0:11:21.03:506,21,0	1/1:4,0:7:21.06:443,21,0	0/0:13,0:13:30.10:0,30,630	0/0:12,0:12:36.11:0,36,738	1/1:6,0:9:21.03:459,21,0	1/1:0,4:5:6.02:203,6,0	1/1:0,5:6:9.03:305,9,0	1/1:6,10:21:15.05:507,15,0	0/0:17,0:17:42.13:0,42,848	1/1:10,0:13:24.06:478,24,0	1/1:12,0:14:39.11:642,39,0	1/1:4,0:6:9.01:225,9,0	0/0:5,0:5:15.03:0,15,234	0/0:14,0:14:36.08:0,36,688	0/0:5,0:5:15.05:0,15,289	1/1:4,18:24:27.09:905,27,0	1/1:8,0:12:21.07:594,21,0	1/1:12,0:26:54.18:1539,54,0	1/1:4,0:20:57.15:1740,57,0
chr10	77731911	.	TCA	T	10658.85	PASS	AB=0.790;AC=34;AF=0.607;AN=56;BaseQRankSum=13.074;DP=875;FS=0.318;HRun=0;HaplotypeScore=148.2667;InbreedingCoeff=0.8460;MQ=59.97;MQ0=19;MQRankSum=-0.961;QD=19.07;ReadPosRankSum=-0.373;VQSLOD=4.6855;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:83.88:0,84,1251	0/0:12,0:12:24.08:0,24,377	0/0:36,0:15:26.76:0,27,306	0/0:49,0:30:29.28:0,29,348	1/1:13,8:21:46.01:531,46,0	1/1:13,14:27:50.70:572,51,0	1/1:14,11:26:41.63:456,42,0	1/1:19,19:36:37.13:565,37,0	0/0:36,1:37:63.12:0,63,1449	1/1:20,15:35:34.88:796,35,0	1/1:5,18:23:30.09:362,30,0	0/0:32,0:32:84.26:0,84,1280	0/0:19,0:19:54.18:0,54,848	1/1:4,24:28:42.13:507,42,0	1/1:13,20:32:57.16:674,57,0	1/1:5,33:40:59.85:679,60,0	1/1:8,38:46:74.34:1022,74,0	0/1:31,2:33:24.77:25,0,1026	1/1:13,6:17:23:315,23,0	1/1:6,26:32:39.12:470,39,0	1/1:36,27:64:99:1610,144,0	0/0:24,0:24:52.99:0,53,823	0/0:21,0:21:42.45:0,42,800	0/0:40,0:41:58.62:0,59,1371	0/1:6,8:13:21.12:260,0,21	1/1:7,31:37:15.79:958,16,0	1/1:5,16:23:59.80:676,60,0	1/1:4,12:16:15.04:181,15,0
chr10	77732014	.	T	TAC	5519.38	PASS	AB=0.667;AC=19;AF=0.339;AN=56;BaseQRankSum=2.789;DP=678;FS=4.127;HRun=0;HaplotypeScore=122.6332;InbreedingCoeff=0.8757;MQ=50.76;MQ0=53;MQRankSum=1.253;QD=33.86;ReadPosRankSum=1.440;VQSLOD=7.2439;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:75.22:0,75,979	0/0:12,0:12:36.09:0,36,448	0/0:41,0:6:12.04:0,12,160	0/0:29,0:6:11.95:0,12,133	1/1:6,4:10:24:415,24,0	0/0:18,0:17:36.16:0,36,482	0/0:14,0:13:30.10:0,30,399	0/0:16,0:12:15.05:0,15,199	0/0:48,0:48:99:0,126,1659	1/1:9,18:25:35.63:954,36,0	1/1:0,8:8:6.02:104,6,0	0/0:38,0:38:99:0,105,1379	0/0:36,0:36:99:0,102,1311	1/1:10,14:24:63.22:1057,63,0	0/0:35,0:35:87.23:0,87,1154	0/0:20,0:20:48.16:0,48,638	0/0:20,0:20:42.11:0,42,536	0/0:28,0:28:58.51:0,59,712	1/1:8,8:14:30.05:477,30,0	0/1:6,6:12:18.87:290,0,19	1/1:16,18:32:54.25:817,54,0	0/0:20,0:20:51.14:0,51,648	0/0:30,0:29:84.28:0,84,1118	0/0:56,0:56:99:0,123,1617	0/0:13,0:13:21.07:0,21,280	1/1:5,8:13:39.13:659,39,0	1/1:4,11:14:39.08:642,39,0	1/1:0,4:4:6.02:104,6,0
chr10	77732020	.	CAT	C	414.57	PASS	AB=0.887;AC=7;AF=0.125;AN=56;BaseQRankSum=4.108;DP=651;FS=0.626;HRun=0;HaplotypeScore=135.5002;InbreedingCoeff=-0.1631;MQ=50.85;MQ0=48;MQRankSum=-0.028;QD=3.54;ReadPosRankSum=-6.263;VQSLOD=-0.3868;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:80.73:0,81,1476	0/0:13,0:13:39.11:0,39,684	0/0:39,0:7:15.03:0,15,255	0/0:27,0:7:20.78:0,21,246	0/1:6,3:9:22.12:22,0,73	0/0:16,0:15:35.51:0,36,672	0/0:14,1:14:29.89:0,30,577	0/0:10,0:5:15.05:0,15,252	0/0:50,0:50:99:0,138,2522	0/0:24,1:23:0.61:0,1,363	0/0:8,0:8:5.92:0,6,39	0/0:40,0:40:99:0,117,2119	0/0:35,0:35:99:0,105,1927	0/1:23,1:24:99:126,0,287	0/0:31,0:31:87.30:0,87,1638	0/0:18,0:18:48.16:0,48,885	0/0:20,0:20:40.38:0,40,725	0/0:25,3:28:16.42:0,16,1121	0/1:14,1:13:77.27:77,0,82	0/1:8,2:10:10.09:10,0,129	0/1:27,5:30:99:181,0,164	0/0:21,0:21:60.16:0,60,1057	0/0:30,0:29:87.28:0,87,1641	0/0:57,1:58:99:0,130,2392	0/0:10,0:10:21.07:0,21,402	0/1:11,2:13:99:109,0,137	0/1:14,0:13:16.78:17,0,176	0/0:2,0:2:6:0,6,51
chr10	77732042	.	CACAG	C	1291.13	PASS	AB=0.938;AC=14;AF=0.259;AN=54;BaseQRankSum=5.909;DP=614;FS=6.470;HRun=0;HaplotypeScore=152.5324;InbreedingCoeff=-0.0860;MQ=50.12;MQ0=38;MQRankSum=0.806;QD=7.64;ReadPosRankSum=-5.358;VQSLOD=0.4829;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:95.21:0,95,2243	0/0:12,0:12:33.11:0,33,888	0/0:40,0:13:39.07:0,39,923	0/0:36,0:12:29.22:0,29,730	1/1:3,2:4:9:99,9,0	0/1:13,0:12:28.04:28,0,340	0/0:9,0:8:5.61:0,6,90	0/0:4,0:1:3.01:0,3,52	0/0:56,0:56:99:0,160,3997	0/1:14,1:15:99:199,0,132	./.	0/0:45,0:45:99:0,126,3070	0/0:45,0:45:99:0,129,3303	0/1:12,4:16:99:282,0,137	0/1:32,0:32:99:270,0,779	0/1:14,0:14:99:113,0,363	0/1:16,0:15:71.88:72,0,190	0/0:28,0:28:72.22:0,72,1795	0/0:10,0:7:0.99:0,1,186	0/0:7,0:7:6.02:0,6,136	0/1:19,6:23:32.89:117,0,33	0/0:30,0:30:87.28:0,87,2233	0/0:37,0:37:99:0,111,2884	0/0:48,0:47:99:0,119,2853	0/1:7,0:7:67.75:68,0,145	0/1:15,0:14:71.58:72,0,407	0/1:8,2:10:99:103,0,102	1/1:1,0:1:2.98:21,3,0
chr10	77732048	.	C	CAT	1250.69	PASS	AB=0.877;AC=13;AF=0.250;AN=52;BaseQRankSum=8.363;DP=613;FS=17.374;HRun=0;HaplotypeScore=147.5894;InbreedingCoeff=-0.1485;MQ=49.16;MQ0=40;MQRankSum=-0.922;QD=7.11;ReadPosRankSum=-5.758;VQSLOD=0.8427;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:90.23:0,90,1309	0/0:12,0:12:33.11:0,33,501	0/0:44,0:13:36.12:0,36,545	0/0:34,0:11:27.09:0,27,413	1/1:5,0:4:8.98:73,9,0	0/1:10,2:11:53.29:53,0,294	0/0:9,0:8:9.50:0,10,130	0/0:8,0:4:9.03:0,9,134	0/0:55,0:55:99:0,160,2378	0/1:12,1:13:99:111,0,166	./.	0/0:46,0:46:99:0,126,1838	0/0:47,0:47:99:0,141,2058	0/1:17,2:19:99:186,0,106	0/1:31,2:33:99:222,0,698	0/1:13,0:13:22.25:22,0,273	0/1:9,6:14:99:212,0,147	0/0:29,0:29:75.22:0,75,1102	0/1:5,2:6:97.81:98,0,126	0/0:5,0:5:9.03:0,9,137	0/1:16,5:19:10.95:179,0,11	0/0:30,0:30:87.28:0,87,1307	0/0:38,0:38:99:0,114,1696	0/0:45,0:44:99:0,108,1624	0/1:7,2:9:67.77:68,0,121	0/1:15,2:15:99:101,0,372	0/1:12,0:12:77.52:78,0,160	./.
chr10	77732078	.	T	TAC	4293.65	PASS	AB=1.000;AC=19;AF=0.352;AN=54;BaseQRankSum=11.389;DP=734;FS=5.199;HRun=0;HaplotypeScore=210.5899;InbreedingCoeff=0.8393;MQ=45.87;MQ0=65;MQRankSum=-13.561;QD=27.88;ReadPosRankSum=-3.072;VQSLOD=4.5441;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:67.96:0,68,832	0/0:13,0:13:33.10:0,33,423	0/0:49,0:8:12:0,12,140	0/0:33,0:7:11.21:0,11,184	1/1:2,4:5:2.40:51,2,0	0/0:21,0:20:29.59:0,30,398	0/0:20,0:19:29.78:0,30,351	0/0:28,0:15:36.12:0,36,479	0/0:55,0:55:99:0,147,1909	1/1:4,18:22:62.66:997,63,0	1/1:0,3:3:3.01:52,3,0	0/0:54,0:54:99:0,156,2045	0/0:47,0:47:99:0,132,1738	1/1:6,18:24:54.18:930,54,0	0/0:37,0:37:72.23:0,72,958	0/0:17,0:17:24.08:0,24,315	0/1:22,0:20:32.33:32,0,363	0/0:34,0:34:78.73:0,79,1030	1/1:9,6:13:15.74:386,16,0	1/1:1,5:6:11.90:207,12,0	1/1:5,15:18:16.86:265,17,0	0/0:41,0:41:99:0,108,1407	0/0:42,0:41:99:0,117,1506	0/0:47,0:45:92.95:0,93,1202	0/0:10,0:10:24.08:0,24,319	1/1:6,19:23:60.06:922,60,0	1/1:2,9:11:29.99:452,30,0	./.
chr10	77732080	.	C	CAA	2623.95	PASS	AB=0.880;AC=18;AF=0.333;AN=54;BaseQRankSum=13.396;DP=742;FS=0.000;HRun=1;HaplotypeScore=225.6220;InbreedingCoeff=0.7618;MQ=45.48;MQ0=68;MQRankSum=-13.858;QD=16.30;ReadPosRankSum=-1.586;VQSLOD=0.1855;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:76.15:0,76,1045	0/0:13,0:13:36.11:0,36,529	0/0:49,0:7:15.03:0,15,203	0/0:31,0:6:17.73:0,18,240	1/1:6,0:5:2.40:34,2,0	0/0:20,1:20:27.98:0,28,455	0/0:21,0:20:29.56:0,30,415	0/0:29,0:16:41.93:0,42,594	0/0:54,0:54:99:0,156,2316	1/1:21,1:22:57.55:614,58,0	1/1:3,0:3:3.01:36,3,0	0/0:53,0:53:99:0,156,2382	0/0:47,0:47:99:0,141,2088	1/1:24,0:24:54.16:621,54,0	0/0:39,0:39:54.52:0,55,1079	0/0:19,0:19:24.08:0,24,367	0/1:17,5:20:93.83:94,0,415	0/0:35,0:35:84.69:0,85,1237	0/1:16,1:14:15.74:256,0,16	1/1:7,0:7:11.89:139,12,0	1/1:16,4:18:20.53:185,21,0	0/0:40,0:40:99:0,117,1722	0/0:41,0:40:99:0,120,1803	0/0:47,0:45:98.02:0,98,1462	0/0:12,0:12:24.08:0,24,364	1/1:29,0:27:46.08:561,46,0	1/1:10,0:11:26.27:278,26,0	./.
chr10	77732104	.	A	AAC	15129.92	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=19.317;DP=965;FS=1.519;HRun=0;HaplotypeScore=294.2880;InbreedingCoeff=0.9235;MQ=45.30;MQ0=36;MQRankSum=-16.292;QD=30.57;ReadPosRankSum=-8.737;VQSLOD=2.3608;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:71.91:0,72,812	0/1:13,0:13:3.03:3,0,336	0/0:54,0:13:33.56:0,34,411	0/0:35,0:13:38.94:0,39,446	1/1:9,12:19:26.30:304,26,0	1/1:7,27:34:93.28:1333,93,0	1/1:2,24:26:51.57:762,52,0	1/1:8,27:24:60.13:928,60,0	0/0:54,0:54:99:0,132,1739	1/1:8,33:40:99:1749,108,0	1/1:6,5:11:21.05:254,21,0	0/0:57,0:57:99:0,156,2044	0/0:57,0:57:99:0,120,1965	1/1:9,30:39:78.21:1063,78,0	1/1:8,48:55:99:2096,141,0	1/1:4,29:33:93.17:1281,93,0	1/1:9,13:20:30.03:485,30,0	0/0:34,0:34:43.44:0,43,961	1/1:10,16:22:30.48:844,30,0	1/1:2,13:15:33.10:415,33,0	1/1:22,17:37:25.56:308,26,0	0/0:49,0:49:99:0,138,1757	0/0:39,0:39:99:0,108,1438	0/0:60,0:57:99:0,109,1397	1/1:9,14:23:47.03:604,47,0	1/1:7,33:39:99:1729,108,0	1/1:2,18:20:54.18:918,54,0	1/1:1,0:1:3.01:52,3,0
chr10	77732108	.	C	CAT	7855.27	PASS	AB=0.940;AC=30;AF=0.536;AN=56;BaseQRankSum=20.775;DP=1001;FS=4.843;HRun=0;HaplotypeScore=331.5884;InbreedingCoeff=0.5361;MQ=45.66;MQ0=29;MQRankSum=-15.561;QD=14.74;ReadPosRankSum=-3.073;VQSLOD=3.6083;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,3:29:77.14:0,77,1053	0/1:10,1:12:21.95:22,0,422	0/0:51,0:14:18.23:0,18,517	0/0:33,0:13:38.62:0,39,551	0/1:20,4:23:43.82:110,0,44	1/1:34,0:34:88.30:712,88,0	1/1:26,0:27:11.92:358,12,0	0/1:40,0:28:26.40:446,0,26	0/0:49,5:54:99:0,141,2088	1/1:44,2:45:59.22:1059,59,0	0/1:12,1:13:10.21:66,0,10	0/0:58,1:59:99:0,168,2473	0/0:58,3:61:99:0,113,2366	1/1:38,3:41:48.23:553,48,0	1/1:54,5:58:95.29:1090,95,0	1/1:34,2:36:23.58:614,24,0	1/1:22,0:20:5.25:263,5,0	0/0:31,1:32:26.55:0,27,1146	0/1:29,0:25:9.64:434,0,10	1/1:15,0:15:29.54:211,30,0	0/1:47,0:44:64.08:90,0,64	0/0:52,1:53:99:0,150,2192	0/0:39,1:40:99:0,117,1725	0/0:52,3:52:99:0,109,1634	1/1:19,5:24:16.77:323,17,0	1/1:41,0:40:30.34:917,30,0	1/1:21,0:21:34.14:562,34,0	1/1:2,0:2:3:27,3,0
chr10	77732124	.	T	TAC	19172.98	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=9.349;DP=1111;FS=3.765;HRun=0;HaplotypeScore=317.5639;InbreedingCoeff=0.9982;MQ=47.15;MQ0=14;MQRankSum=-11.091;QD=30.05;ReadPosRankSum=-5.978;VQSLOD=2.3703;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:68.28:0,68,810	0/0:12,0:12:30.06:0,30,364	0/0:42,0:15:29.94:0,30,312	0/0:41,0:17:38.68:0,39,496	1/1:4,24:27:44.48:776,44,0	1/1:7,34:41:84.24:1369,84,0	1/1:15,14:29:53.16:859,53,0	1/1:29,21:33:59.86:779,60,0	0/0:48,0:48:99:0,117,1489	1/1:13,45:58:60.54:2094,61,0	1/1:2,17:19:30.08:519,30,0	0/0:59,0:59:99:0,147,1938	0/0:60,0:60:99:0,159,2057	1/1:17,28:45:96.31:1577,96,0	1/1:23,47:71:99:2509,162,0	1/1:14,29:41:99:1722,102,0	1/1:13,11:21:24.23:404,24,0	0/0:34,0:34:83.96:0,84,1022	1/1:8,21:29:62.22:1034,62,0	1/1:11,12:23:45.03:679,45,0	1/1:10,47:56:49.54:843,50,0	0/0:51,0:51:99:0,132,1678	0/0:40,0:40:99:0,108,1404	0/0:54,0:52:99:0,102,1294	1/1:12,17:29:20.56:633,21,0	1/1:8,42:49:99:1953,120,0	1/1:5,23:29:63.21:1061,63,0	1/1:3,7:10:21.07:363,21,0
chr10	77732356	.	TAC	T	362.04	PASS	AB=0.667;AC=1;AF=0.019;AN=52;BaseQRankSum=-0.705;DP=777;FS=1.933;HRun=0;HaplotypeScore=192.9632;InbreedingCoeff=0.1987;MQ=42.12;MQ0=53;MQRankSum=-1.491;QD=12.93;ReadPosRankSum=-1.612;VQSLOD=3.4753;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:39.12:0,39,560	0/0:11,0:11:29.69:0,30,434	./.	./.	0/0:24,0:22:12.34:0,12,62	0/0:9,0:9:5.86:0,6,15	0/0:24,0:20:5.81:0,6,16	0/0:58,1:25:12.01:0,12,105	0/0:33,0:32:63.21:0,63,1002	0/0:50,0:40:63.76:0,64,353	0/0:16,0:15:8.35:0,8,30	0/0:25,0:24:20.25:0,20,773	0/0:32,0:30:66.20:0,66,937	0/0:28,0:27:11.01:0,11,29	0/0:31,0:28:22.04:0,22,89	0/0:32,0:32:18.59:0,19,57	0/0:16,2:16:10.27:0,10,63	0/1:14,14:28:5.04:436,0,5	0/0:24,0:8:12.40:0,12,56	0/0:35,0:35:26.45:0,26,82	0/0:57,0:46:11.83:0,12,108	0/0:24,0:24:53.20:0,53,778	0/0:22,0:22:45.15:0,45,711	0/0:34,0:32:38.64:0,39,602	0/0:11,0:11:7.20:0,7,34	0/0:37,0:31:39.29:0,39,141	0/0:22,0:19:18.86:0,19,61	0/0:7,0:7:2.50:0,2,9
chr10	77732360	.	C	CAT	8722.76	PASS	AB=0.803;AC=30;AF=0.536;AN=56;BaseQRankSum=6.162;DP=701;FS=18.791;HRun=0;HaplotypeScore=153.1347;InbreedingCoeff=0.6455;MQ=41.85;MQ0=48;MQRankSum=-5.632;QD=20.05;ReadPosRankSum=0.377;VQSLOD=3.9728;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:57.51:0,58,680	0/0:11,0:11:30.10:0,30,456	0/0:23,0:1:2.92:0,3,17	0/0:23,0:1:2.99:0,3,24	1/1:12,8:18:12.35:359,12,0	1/1:4,4:8:18.03:260,18,0	0/1:15,5:16:4.98:149,0,5	0/1:47,10:24:9.13:459,0,9	0/0:31,0:30:79.91:0,80,1056	1/1:29,15:36:78.38:1304,78,0	1/1:3,12:14:0.07:234,0,0	0/0:24,0:23:66.12:0,66,872	0/0:30,0:30:80.67:0,81,1041	1/1:7,20:26:28.33:461,28,0	1/1:18,12:27:51.09:827,51,0	1/1:3,25:29:36.12:636,36,0	0/1:12,4:14:27.70:232,0,28	0/0:25,0:25:41.70:0,42,411	0/1:13,6:7:2.96:217,0,3	1/1:15,14:29:72.15:1059,72,0	1/1:44,9:43:45.30:609,45,0	0/0:23,0:23:61.98:0,62,834	0/0:21,0:21:60.05:0,60,788	0/0:28,0:26:51.98:0,52,681	1/1:6,3:9:18.01:248,18,0	1/1:18,17:30:15.40:1038,15,0	1/1:9,9:15:36.07:576,36,0	1/1:1,4:5:3.01:55,3,0
chr10	77732362	.	C	CATAT	5317.53	PASS	AB=0.977;AC=29;AF=0.518;AN=56;BaseQRankSum=9.602;DP=664;FS=34.049;HRun=0;HaplotypeScore=174.1486;InbreedingCoeff=0.5694;MQ=41.66;MQ0=47;MQRankSum=-6.787;QD=12.84;ReadPosRankSum=-0.450;VQSLOD=2.5401;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:13.83:0,14,834	0/0:11,0:11:30:0,30,595	0/0:20,0:1:3.01:0,3,36	0/0:17,0:1:2.98:0,3,22	1/1:19,0:17:5.13:177,5,0	1/1:7,0:7:16.89:142,17,0	0/1:20,0:16:24.39:93,0,24	0/1:49,4:20:85.12:368,0,85	0/0:31,0:30:79.46:0,79,1402	1/1:44,0:36:45.06:752,45,0	1/1:13,0:12:15.45:135,15,0	0/0:24,0:23:66.22:0,66,1231	0/0:30,0:30:61.95:0,62,1374	1/1:24,0:23:32.95:298,33,0	1/1:27,1:25:49.97:520,50,0	1/1:25,0:25:39.05:386,39,0	0/1:16,0:14:28.36:123,0,28	0/0:24,0:24:20.81:0,21,558	0/1:20,1:8:27.04:111,0,27	1/1:28,0:28:49.86:606,50,0	1/1:50,0:40:46.37:386,46,0	0/0:22,0:22:63.19:0,63,1172	0/0:20,0:20:60.08:0,60,1052	0/0:26,0:25:47.97:0,48,911	1/1:9,0:9:16.99:127,17,0	1/1:34,1:29:33.58:752,34,0	1/1:17,0:14:25.59:313,26,0	0/1:5,0:5:27.47:27,0,41
chr10	77732491	.	CAT	C	174.22	PASS	AB=0.983;AC=7;AF=0.125;AN=56;BaseQRankSum=2.978;DP=461;FS=5.812;HRun=0;HaplotypeScore=148.3287;InbreedingCoeff=0.1445;MQ=45.58;MQ0=44;MQRankSum=-4.238;QD=1.51;ReadPosRankSum=-2.265;VQSLOD=1.9367;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:24.77:0,25,483	0/0:6,0:6:15.05:0,15,285	0/0:38,0:2:2.84:0,3,14	0/0:45,0:5:7.05:0,7,67	0/0:3,0:1:0:0,0,0	0/0:3,0:3:8.94:0,9,67	0/0:7,0:6:2.93:0,3,18	0/1:25,0:9:8.32:8,0,60	0/0:22,0:21:59.54:0,60,1024	0/1:15,0:13:9.70:10,0,169	0/0:4,0:4:8.19:0,8,53	0/0:22,0:22:59.30:0,59,973	0/0:26,0:26:44.23:0,44,1092	0/0:16,0:16:24.87:0,25,173	0/0:15,0:15:11.56:0,12,228	0/0:11,0:11:23.92:0,24,250	0/1:8,0:8:5.21:5,0,39	1/1:15,0:15:32.27:191,32,0	0/0:17,0:5:12.78:0,13,86	0/0:12,0:12:5.81:0,6,135	0/1:39,4:38:27.56:34,0,28	0/0:17,0:17:48.15:0,48,870	0/0:12,0:12:31.74:0,32,459	0/0:30,0:28:69.20:0,69,1261	0/0:16,0:16:32.59:0,33,241	0/1:9,0:7:51.45:51,0,103	0/0:6,0:5:11.32:0,11,97	0/0:2,0:2:2.99:0,3,23
chr10	77732493	.	TAC	T	329.93	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=1.517;DP=486;FS=0.000;HRun=0;HaplotypeScore=159.5302;InbreedingCoeff=0.4432;MQ=45.12;MQ0=43;MQRankSum=-3.063;QD=4.78;ReadPosRankSum=-1.329;VQSLOD=2.7161;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:9.99:0,10,492	0/0:6,0:6:15.05:0,15,245	1/1:39,0:2:2.60:10,3,0	0/0:47,0:5:5.51:0,6,58	0/1:4,0:2:0.06:0,0,0	0/0:4,0:4:10.78:0,11,45	0/0:9,0:8:2.66:0,3,11	0/0:27,0:10:15.42:0,15,56	0/0:22,0:21:60.20:0,60,956	0/0:16,0:14:23.67:0,24,116	0/0:6,0:6:2.62:0,3,32	0/0:23,0:23:66.16:0,66,1007	0/0:26,0:26:39.22:0,39,1070	0/0:16,0:17:21.83:0,22,156	0/0:19,0:19:36.84:0,37,152	0/0:13,0:13:22.01:0,22,150	0/0:8,0:8:8.29:0,8,37	1/1:7,7:15:32.66:412,33,0	0/0:16,0:6:5.62:0,6,121	0/0:13,0:13:15.59:0,16,105	0/0:43,1:40:7.50:0,7,36	0/0:17,0:17:48.16:0,48,747	0/0:12,0:12:33.11:0,33,493	0/0:29,1:28:71.44:0,71,1124	0/0:16,0:16:29.65:0,30,124	0/1:11,0:8:18.69:19,0,48	0/0:6,0:5:11.68:0,12,90	0/0:2,0:2:2.74:0,3,12
chr10	77732497	.	C	CAT	4392.79	PASS	AB=0.776;AC=29;AF=0.518;AN=56;BaseQRankSum=8.991;DP=531;FS=9.559;HRun=0;HaplotypeScore=158.8337;InbreedingCoeff=0.5288;MQ=42.04;MQ0=50;MQRankSum=-10.569;QD=17.71;ReadPosRankSum=-2.019;VQSLOD=4.2632;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:41.85:0,42,547	0/0:6,0:6:15.05:0,15,229	0/0:39,0:2:2.98:0,3,22	0/0:55,0:5:8.72:0,9,78	1/1:3,1:2:3.01:36,3,0	1/1:3,3:6:2.56:176,3,0	1/1:9,2:10:5.74:78,6,0	0/1:20,9:11:11.61:348,0,12	0/0:28,0:27:72.12:0,72,1011	1/1:3,12:14:27.07:454,27,0	1/1:2,4:6:9.02:122,9,0	0/0:23,0:23:66.16:0,66,975	0/0:27,0:27:79.76:0,80,1146	1/1:5,12:17:27.31:394,27,0	1/1:7,13:20:44.83:709,45,0	0/1:6,9:15:39.06:325,0,39	0/1:7,2:9:18.80:98,0,19	0/0:20,0:20:37.76:0,38,266	0/1:18,2:6:35.84:36,0,92	1/1:2,11:13:4.64:229,5,0	0/1:32,14:41:0.08:324,0,0	0/0:19,0:19:54.16:0,54,773	0/0:14,0:14:36.11:0,36,528	0/0:34,0:32:73.88:0,74,1114	1/1:2,16:18:33.11:596,33,0	1/1:5,6:8:17.36:281,17,0	1/1:2,4:5:11.67:133,12,0	1/1:0,2:2:3.01:52,3,0
chr10	77732501	.	C	CAT	1134.97	PASS	AB=0.965;AC=24;AF=0.429;AN=56;BaseQRankSum=11.764;DP=598;FS=14.014;HRun=0;HaplotypeScore=190.4530;InbreedingCoeff=0.1947;MQ=41.98;MQ0=53;MQRankSum=-11.353;QD=3.83;ReadPosRankSum=1.432;VQSLOD=2.0813;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:40.41:0,40,576	0/0:7,0:7:18.05:0,18,254	0/0:38,0:2:5.89:0,6,37	0/0:55,0:6:11.37:0,11,89	1/1:7,0:4:1.82:5,2,0	0/1:6,0:6:10.19:45,0,10	0/1:13,0:12:12.10:12,0,16	0/1:31,0:13:41.09:73,0,41	0/0:30,0:29:81.16:0,81,1085	0/1:20,0:19:3.70:96,0,4	1/1:11,0:9:4.71:26,5,0	0/0:27,0:27:75.11:0,75,1044	0/0:27,0:27:80.24:0,80,1148	1/1:21,0:21:17.54:99,18,0	0/1:23,1:24:40.43:210,0,40	0/1:20,0:20:74.75:75,0,123	0/1:10,1:11:20.44:75,0,20	0/0:21,0:21:44.91:0,45,336	1/1:22,1:6:3.75:57,4,0	0/1:14,0:14:28.45:68,0,28	1/1:49,0:43:23.53:128,24,0	0/0:21,0:21:54.15:0,54,768	0/0:17,0:17:45.03:0,45,593	0/0:37,0:35:73.56:0,74,1138	1/1:18,0:18:32.57:212,33,0	0/1:14,1:11:40.75:50,0,41	0/1:7,1:7:9.07:66,0,9	1/1:2,0:2:2.94:18,3,0
chr10	77732519	.	CAT	C	1408.43	PASS	AB=0.996;AC=15;AF=0.268;AN=56;BaseQRankSum=11.456;DP=778;FS=17.362;HRun=0;HaplotypeScore=233.7065;InbreedingCoeff=0.4505;MQ=40.69;MQ0=59;MQRankSum=-10.693;QD=7.08;ReadPosRankSum=-2.218;VQSLOD=1.7021;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:25.16:0,25,1022	0/0:8,0:8:21.05:0,21,370	0/0:47,0:8:20.52:0,21,177	0/0:62,0:8:13.75:0,14,213	1/1:8,0:6:5.52:45,6,0	0/0:10,0:10:17.28:0,17,121	0/0:25,0:22:30.20:0,30,183	0/0:46,0:25:22.09:0,22,657	0/0:37,0:36:99:0,108,1955	1/1:28,1:26:48.43:342,48,0	1/1:12,1:11:29.63:208,30,0	0/0:35,0:34:98.66:0,99,1723	0/0:34,0:34:99:0,102,1784	1/1:23,1:24:57.31:379,57,0	0/0:43,0:42:72.52:0,73,649	0/0:26,0:26:34.69:0,35,460	0/0:17,0:17:1.86:0,2,143	0/0:30,1:31:52.92:0,53,1090	0/1:25,0:6:29.93:30,0,119	0/1:18,0:18:19.05:189,0,19	0/1:47,1:41:99:112,0,110	0/0:27,0:27:78.23:0,78,1389	0/0:24,0:23:65.56:0,66,1148	0/0:56,0:54:99:0,128,2131	0/0:22,0:22:56.45:0,56,306	0/1:22,0:17:31.65:162,0,32	0/1:10,0:8:24.13:98,0,24	1/1:2,0:2:2.96:19,3,0
chr10	77732527	.	CAT	C	3982.07	PASS	AB=0.993;AC=29;AF=0.518;AN=56;BaseQRankSum=15.038;DP=879;FS=9.425;HRun=0;HaplotypeScore=246.3779;InbreedingCoeff=0.6128;MQ=39.98;MQ0=65;MQRankSum=-10.127;QD=8.89;ReadPosRankSum=-5.199;VQSLOD=1.3156;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:32:56.47:0,56,1223	0/0:9,0:9:24.05:0,24,406	0/0:57,0:7:21.02:0,21,341	0/0:66,0:7:17.79:0,18,304	1/1:11,0:9:5.62:45,6,0	1/1:15,0:15:26.33:164,26,0	1/1:28,0:25:49:322,49,0	0/1:55,0:27:85.16:85,0,403	0/0:40,0:39:99:0,117,2033	1/1:38,0:34:28.79:351,29,0	1/1:15,0:13:29.53:209,30,0	0/0:39,0:38:99:0,111,1954	0/0:38,0:38:99:0,114,1983	1/1:26,1:27:67.25:436,67,0	1/1:51,1:50:99:695,104,0	1/1:28,1:29:21.60:438,22,0	1/1:22,0:21:20.30:149,20,0	0/0:34,0:34:40.42:0,40,1370	1/1:30,0:11:5.60:49,6,0	0/1:20,0:20:13.27:204,0,13	0/1:45,0:40:25.70:134,0,26	0/0:31,0:31:77.32:0,77,1549	0/0:26,0:25:72.21:0,72,1250	0/0:57,1:56:99:0,137,2368	1/1:22,0:22:59.43:423,59,0	0/1:25,1:19:54.65:157,0,55	0/1:10,0:9:2.73:103,0,3	1/1:2,0:2:2.96:19,3,0
chr10	77732531	.	TAC	T	8270.19	PASS	AB=0.763;AC=28;AF=0.500;AN=56;BaseQRankSum=10.272;DP=951;FS=8.143;HRun=0;HaplotypeScore=253.2472;InbreedingCoeff=0.5304;MQ=40.39;MQ0=67;MQRankSum=-8.721;QD=16.78;ReadPosRankSum=-3.407;VQSLOD=3.1553;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:78.39:0,78,1269	0/0:10,0:10:27.08:0,27,433	0/0:61,0:7:21.07:0,21,346	0/0:70,0:8:23.97:0,24,376	1/1:8,6:12:6.78:100,7,0	1/1:7,9:16:16.39:344,16,0	1/1:13,17:27:57.02:681,57,0	0/1:47,8:25:99:205,0,321	0/0:44,0:42:99:0,126,2052	1/1:21,26:40:6.87:735,7,0	1/1:5,12:15:21.88:392,22,0	0/0:41,0:40:99:0,117,1958	0/0:39,0:39:99:0,117,1982	1/1:17,19:36:74.57:999,75,0	1/1:17,37:51:82.06:1356,82,0	1/1:11,21:32:18.25:944,18,0	1/1:16,6:21:8.27:314,8,0	0/0:35,0:35:54.42:0,54,1404	0/1:25,3:11:51.88:69,0,52	0/1:7,17:24:3.87:497,0,4	0/1:33,9:37:31.54:184,0,32	0/0:35,0:35:99:0,102,1613	0/0:27,0:26:75.24:0,75,1260	0/0:61,1:60:99:0,150,2425	1/1:7,21:28:44.22:817,44,0	0/1:18,13:23:59.46:409,0,59	0/1:8,6:13:31.57:186,0,32	1/1:0,2:2:3.01:37,3,0
chr10	77732539	.	CAT	C	3752.40	PASS	AB=0.989;AC=22;AF=0.393;AN=56;BaseQRankSum=15.279;DP=1050;FS=9.386;HRun=0;HaplotypeScore=294.1109;InbreedingCoeff=0.1233;MQ=40.91;MQ0=67;MQRankSum=-11.625;QD=6.75;ReadPosRankSum=0.308;VQSLOD=1.7105;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:89.82:0,90,1508	0/0:13,0:13:18:0,18,507	0/0:62,0:7:21.07:0,21,381	0/0:70,0:8:23.75:0,24,393	0/1:19,0:17:12.40:46,0,12	1/1:18,0:18:27.55:165,28,0	1/1:36,0:31:11.02:279,11,0	0/1:47,5:22:99:146,0,377	0/0:54,0:52:99:0,153,2531	0/1:60,1:52:96.09:349,0,96	1/1:19,0:17:28.02:208,28,0	0/0:47,0:46:99:0,135,2380	0/0:42,0:42:99:0,126,2283	1/1:39,0:39:50.39:452,50,0	0/1:60,0:57:5.70:528,0,6	0/1:41,0:41:59.06:380,0,59	0/1:22,0:21:41.49:123,0,41	0/0:39,0:39:75.77:0,76,1749	0/1:28,0:12:24.89:25,0,141	0/1:30,0:30:33.43:228,0,33	0/1:44,0:38:57.29:57,0,90	0/0:36,0:36:93.10:0,93,1830	0/0:27,0:27:78.12:0,78,1428	0/0:65,0:63:99:0,156,2807	1/1:31,0:31:59.03:423,59,0	0/1:34,1:25:17.60:215,0,18	0/1:17,0:16:40.20:118,0,40	0/1:4,0:4:11.71:12,0,19
chr10	77732555	.	TAC	T	5919.94	PASS	AB=0.777;AC=15;AF=0.268;AN=56;BaseQRankSum=6.990;DP=1255;FS=24.009;HRun=0;HaplotypeScore=332.0397;InbreedingCoeff=0.3822;MQ=42.32;MQ0=75;MQRankSum=-5.024;QD=14.30;ReadPosRankSum=-5.188;VQSLOD=2.8855;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:93.23:0,93,1559	0/0:16,0:16:39.01:0,39,612	0/0:58,0:7:12.03:0,12,157	0/0:68,0:8:14.26:0,14,174	1/1:17,9:24:12.07:260,12,0	0/0:23,0:23:51.49:0,51,748	0/0:52,1:46:91.03:0,91,1334	0/0:68,0:22:38.99:0,39,593	0/0:59,0:57:99:0,156,2563	0/1:53,31:73:99:1034,0,305	0/1:13,15:25:32.58:467,0,33	0/0:52,0:52:99:0,144,2452	0/0:41,0:41:99:0,123,2078	1/1:23,25:48:60.01:1201,60,0	0/0:68,6:71:99:0,136,2111	0/0:59,0:59:99:0,129,2060	0/1:32,1:32:16.60:17,0,885	0/0:49,0:49:68.34:0,68,1921	0/1:28,4:12:2.14:192,0,2	0/1:27,20:47:51.88:705,0,52	1/1:22,18:34:66.18:841,66,0	0/0:41,0:40:99:0,114,1907	0/0:30,0:30:84.26:0,84,1378	0/0:62,0:60:99:0,146,2388	0/0:44,0:44:62.79:0,63,941	0/1:33,16:41:70.10:740,0,70	0/1:15,8:22:36.33:368,0,36	1/1:2,2:4:8.97:95,9,0
chr10	77732569	.	A	AT	348.59	PASS	AB=0.851;AC=7;AF=0.125;AN=56;BaseQRankSum=9.377;DP=1383;FS=2.647;HRun=0;HaplotypeScore=354.5699;InbreedingCoeff=-0.1538;MQ=43.93;MQ0=84;MQRankSum=-4.122;QD=1.15;ReadPosRankSum=-0.421;VQSLOD=1.4296;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:94.12:0,94,1360	0/0:13,0:13:33.11:0,33,458	0/0:45,0:3:9.03:0,9,108	0/0:56,0:5:12.04:0,12,161	0/1:25,11:34:14.36:14,0,291	0/0:24,2:26:37.98:0,38,568	0/0:58,3:52:78.41:0,78,1126	0/0:80,2:29:60.23:0,60,789	0/0:59,0:57:99:0,168,2278	0/1:76,22:87:99:250,0,1473	0/1:34,6:37:39.48:39,0,383	0/0:52,0:52:99:0,151,2077	0/0:47,0:47:99:0,141,1879	0/0:45,5:50:14.35:0,14,828	0/0:74,9:80:70.66:0,71,1738	0/0:59,11:70:58.92:0,59,1596	0/0:30,4:33:44.12:0,44,863	0/0:49,0:49:99:0,130,1734	0/1:32,0:11:11.42:11,0,197	0/0:46,15:60:38.44:0,38,752	0/0:61,0:51:93.71:0,94,1011	0/0:43,0:42:99:0,123,1667	0/0:35,0:34:93.27:0,93,1261	0/0:59,0:58:99:0,146,1971	0/0:36,12:48:2.44:0,2,569	0/1:45,10:47:48.57:49,0,974	0/1:19,9:27:76.13:76,0,324	0/1:12,1:13:36.74:37,0,178
chr10	77732657	.	T	TACAC	37668.10	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-11.430;DP=1322;FS=19.027;HRun=0;HaplotypeScore=306.1980;InbreedingCoeff=0.9989;MQ=49.00;MQ0=31;MQRankSum=-2.646;QD=40.07;ReadPosRankSum=4.158;VQSLOD=3.8711;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:29.27:0,29,1158	0/0:10,0:10:27.09:0,27,496	0/0:32,1:13:22.32:0,22,375	0/0:50,0:17:24.02:0,24,406	1/1:21,30:52:72.51:2116,73,0	1/1:4,28:31:42.14:1108,42,0	1/1:23,15:37:41.92:1134,42,0	1/1:57,13:48:99:1644,102,0	0/0:46,0:46:99:0,117,2043	1/1:34,61:94:99:5807,253,0	1/1:11,50:58:78.23:1989,78,0	0/0:32,0:32:84.23:0,84,1413	0/0:41,0:41:99:0,105,1660	1/1:5,50:54:75.19:1899,75,0	1/1:26,41:65:99:2900,101,0	1/1:8,62:70:84.29:2215,84,0	1/1:9,26:35:27.99:1912,28,0	0/0:40,0:38:91.56:0,92,1618	1/1:13,12:17:42.06:937,42,0	1/1:10,66:77:99:2720,105,0	1/1:36,34:64:67.46:2063,67,0	0/0:26,0:26:72.20:0,72,1209	0/0:31,0:31:87.23:0,87,1486	0/0:39,0:38:95.76:0,96,1506	1/1:11,30:40:58.03:1445,58,0	1/1:18,55:72:99:4405,171,0	1/1:19,21:41:81.15:1906,81,0	1/1:8,23:32:69:1469,69,0
chr10	77732735	.	AACACATACAC	A	6960.10	PASS	AB=0.852;AC=28;AF=0.519;AN=54;BaseQRankSum=10.343;DP=714;FS=9.953;HRun=0;HaplotypeScore=206.2672;InbreedingCoeff=0.6207;MQ=41.81;MQ0=76;MQRankSum=-11.845;QD=22.75;ReadPosRankSum=-10.648;VQSLOD=0.5535;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:25.76:0,26,1708	0/0:14,0:14:33.09:0,33,1045	0/0:50,0:3:4.26:0,4,51	./.	1/1:6,4:9:14.47:193,14,0	1/1:4,4:8:19.31:361,19,0	1/1:20,1:18:6.02:115,6,0	0/0:36,0:17:11.82:0,12,98	0/0:38,0:38:78.15:0,78,3041	1/1:24,2:21:5.57:692,6,0	1/1:9,3:12:14.01:159,14,0	0/0:34,0:34:75.21:0,75,2655	0/0:37,0:37:78.20:0,78,2607	1/1:8,5:12:21.80:414,22,0	1/1:22,6:28:46.16:805,46,0	0/1:15,6:21:99:563,0,116	0/1:14,7:21:40.65:428,0,41	0/0:39,0:37:49.18:0,49,2016	0/1:19,3:5:24.50:247,0,25	1/1:15,7:22:39.34:743,39,0	0/1:38,0:32:35.87:68,0,36	0/0:21,0:20:39.13:0,39,1695	0/0:20,0:20:45.14:0,45,1830	0/0:41,0:40:66.14:0,66,2724	1/1:10,4:15:27.25:413,27,0	1/1:19,7:18:28.78:840,29,0	1/1:7,11:18:39.86:856,40,0	1/1:3,1:4:4.26:63,4,0
chr10	77732823	.	CAT	C	12879.41	PASS	AB=0.931;AC=35;AF=0.625;AN=56;BaseQRankSum=9.227;DP=675;FS=1.674;HRun=0;HaplotypeScore=133.9063;InbreedingCoeff=0.8925;MQ=62.79;MQ0=6;MQRankSum=-2.795;QD=26.45;ReadPosRankSum=-0.885;VQSLOD=5.8126;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:69.18:0,69,1065	0/0:16,0:16:33.11:0,33,548	0/0:19,1:15:8.06:0,8,99	0/0:15,0:11:3.50:0,4,10	1/1:6,24:28:72.23:914,72,0	1/1:6,19:25:63.19:786,63,0	1/1:4,6:10:27.07:328,27,0	1/1:20,20:40:99:1211,102,0	0/0:18,0:18:39.10:0,39,600	1/1:13,22:35:84.23:1038,84,0	1/1:8,17:24:57.18:724,57,0	0/0:18,0:18:39.11:0,39,625	0/1:25,2:27:13.02:13,0,885	1/1:7,20:27:66.19:820,66,0	1/1:13,25:38:72.21:899,72,0	1/1:15,15:29:57.15:696,57,0	1/1:6,13:19:39.12:495,39,0	0/0:22,0:22:60.12:0,60,913	1/1:8,16:24:57.15:707,57,0	1/1:7,20:27:57.17:710,57,0	1/1:3,14:17:33.11:419,33,0	0/0:15,0:15:36.12:0,36,599	0/0:14,0:14:36.12:0,36,601	0/0:17,0:17:18.06:0,18,295	1/1:9,13:21:48.12:581,48,0	1/1:9,25:33:78.24:980,78,0	1/1:9,23:33:72.04:872,72,0	1/1:1,23:24:54.17:686,54,0
chr10	77733707	.	C	CT	5509.01	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=13.370;DP=660;FS=0.000;HRun=11;HaplotypeScore=92.5198;InbreedingCoeff=0.9879;MQ=62.62;MQ0=1;MQRankSum=0.118;QD=12.11;ReadPosRankSum=0.894;VQSLOD=4.6548;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:79.69:0,80,604	0/0:14,0:14:19.30:0,19,239	0/0:13,0:10:9.21:0,9,98	0/0:20,0:12:21.60:0,22,129	1/1:41,0:41:99:605,106,0	1/1:23,0:22:57.52:313,58,0	1/1:19,0:19:42.54:223,43,0	1/1:34,0:33:66.72:340,67,0	1/1:4,14:18:30.06:304,30,0	1/1:28,0:28:57.45:237,57,0	1/1:27,0:27:69.28:384,69,0	0/0:18,0:20:20.39:0,20,268	0/0:21,0:21:53.77:0,54,418	1/1:25,0:24:38.76:229,39,0	1/1:25,0:25:56.52:286,57,0	1/1:18,0:18:36.81:187,37,0	1/1:36,0:36:74.14:398,74,0	0/0:32,0:32:89.60:0,90,688	1/1:18,0:18:33.36:162,33,0	1/1:35,1:36:80.30:452,80,0	1/1:10,0:10:17.42:95,17,0	0/0:16,0:16:41.80:0,42,321	0/0:23,0:23:68.72:0,69,531	0/0:14,0:14:32.85:0,33,253	1/1:20,0:20:49.28:268,49,0	1/1:31,0:31:77.32:356,77,0	1/1:27,0:27:74.22:403,74,0	1/1:19,0:19:46.72:266,47,0
chr10	77733710	.	T	TC	14302.95	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-14.344;DP=652;FS=0.321;HRun=0;HaplotypeScore=58.7748;InbreedingCoeff=0.8954;MQ=62.71;MQ0=1;MQRankSum=1.608;QD=31.86;ReadPosRankSum=1.511;VQSLOD=4.6065;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.23:0,90,1182	0/0:12,1:13:4.69:0,5,446	0/0:14,0:10:7.96:0,8,170	0/0:20,0:12:27.01:0,27,300	1/1:1,42:43:99:1493,120,0	1/1:0,22:21:60.19:797,60,0	1/1:0,19:19:45.15:593,45,0	1/1:1,35:35:99:1136,99,0	0/1:18,0:18:13.05:13,0,52	1/1:0,27:27:81.12:972,81,0	1/1:0,26:26:72.23:959,72,0	0/0:18,0:18:51.95:0,52,626	0/0:21,0:21:63.18:0,63,830	1/1:1,22:22:35.26:553,35,0	1/1:0,24:24:60.19:783,60,0	1/1:1,17:18:39.11:512,39,0	1/1:4,30:34:28.62:940,29,0	0/0:32,0:32:93.27:0,93,1268	1/1:1,19:20:54.06:634,54,0	1/1:1,33:34:99:1191,102,0	1/1:0,10:10:18.06:245,18,0	0/0:16,0:16:48.14:0,48,635	0/0:23,0:23:69.23:0,69,959	0/0:14,0:14:39.11:0,39,510	1/1:1,19:20:45.28:649,45,0	1/1:0,29:29:87.27:1151,87,0	1/1:0,27:27:78.25:1028,78,0	1/1:0,19:19:48.16:653,48,0
chr10	77734205	.	TGA	T	17215.01	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=19.249;DP=672;FS=0.925;HRun=0;HaplotypeScore=138.6832;InbreedingCoeff=0.9999;MQ=77.13;MQ0=0;MQRankSum=-5.618;QD=43.04;ReadPosRankSum=2.157;VQSLOD=6.1340;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1956	0/0:13,0:13:39.13:0,39,791	0/0:23,0:23:62.57:0,63,1086	0/0:18,0:18:51.17:0,51,956	1/1:1,33:34:87.19:1346,87,0	1/1:0,22:22:54.18:879,54,0	1/1:0,26:26:72.25:1170,72,0	1/1:0,35:35:99:1573,105,0	0/0:28,0:28:84.29:0,84,1705	1/1:0,19:19:57.19:925,57,0	1/1:0,20:20:57.19:926,57,0	0/0:20,0:20:60.16:0,60,1118	0/0:37,0:37:99:0,111,2164	1/1:0,19:19:54.18:879,54,0	1/1:0,14:14:33.04:506,33,0	1/1:0,25:25:66.23:1074,66,0	1/1:0,26:26:66.23:1071,66,0	0/0:15,0:15:39.13:0,39,792	1/1:0,15:15:42.12:634,42,0	1/1:0,31:31:78.16:1208,78,0	1/1:0,15:15:36.12:586,36,0	0/0:28,0:28:84.26:0,84,1634	0/0:29,0:29:87.28:0,87,1727	0/0:26,0:26:78.27:0,78,1570	1/1:0,26:26:78.27:1265,78,0	1/1:0,31:31:93.28:1464,93,0	1/1:0,18:18:42.14:684,42,0	1/1:0,24:24:63.22:1026,63,0
chr10	77734653	.	ATG	A	26568.40	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=12.172;DP=1217;FS=3.637;HRun=0;HaplotypeScore=216.2760;InbreedingCoeff=0.9996;MQ=56.92;MQ0=12;MQRankSum=2.733;QD=34.68;ReadPosRankSum=2.998;VQSLOD=5.3549;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:51.17:0,51,933	0/0:11,0:11:24.08:0,24,439	0/0:56,2:41:99:0,102,1660	0/0:41,0:28:71.07:0,71,1164	1/1:1,30:31:69.13:986,69,0	1/1:8,28:35:95.66:1387,96,0	1/1:6,25:31:84.28:1201,84,0	1/1:3,51:54:99:2051,136,0	0/0:59,0:59:99:0,175,3115	1/1:2,77:79:99:3189,229,0	1/1:1,28:29:42.14:601,42,0	0/0:46,0:46:99:0,135,2397	0/0:61,0:61:99:0,178,3171	1/1:2,58:58:99:1999,141,0	1/1:9,57:66:99:2789,196,0	1/1:7,31:35:99:1503,105,0	1/1:3,30:33:60.05:1086,60,0	0/0:18,0:18:50.91:0,51,890	1/1:2,31:31:80.33:1142,80,0	1/1:3,55:58:99:1545,108,0	1/1:26,54:78:99:2722,196,0	0/0:66,0:66:99:0,169,3053	0/0:32,0:32:75.26:0,75,1372	0/0:34,0:33:78.23:0,78,1352	1/1:2,26:28:30.95:627,31,0	1/1:2,47:47:99:1892,135,0	1/1:2,36:37:78.26:1117,78,0	1/1:0,23:23:51.17:730,51,0
chr10	77734755	.	A	ATG	30106.68	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-18.436;DP=1239;FS=14.431;HRun=0;HaplotypeScore=180.0055;InbreedingCoeff=0.9985;MQ=55.65;MQ0=13;MQRankSum=2.089;QD=37.59;ReadPosRankSum=1.505;VQSLOD=4.9904;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:25.88:0,26,384	0/0:20,0:21:56.97:0,57,696	0/0:44,0:19:27.18:0,27,352	0/0:47,0:27:58.85:0,59,696	1/1:2,35:37:39.26:1225,39,0	1/1:4,39:43:99:1681,99,0	1/1:4,26:31:69.24:1173,69,0	1/1:14,53:68:99:2568,166,0	0/0:55,0:55:99:0,150,1902	1/1:10,66:75:99:3205,190,0	1/1:9,14:22:48.13:758,48,0	0/0:63,0:63:99:0,159,2030	0/0:66,0:66:99:0,166,2126	1/1:2,51:53:99:2295,135,0	1/1:8,71:79:99:2704,160,0	1/1:10,52:61:99:2092,123,0	1/1:9,26:35:81.12:1340,81,0	0/0:24,0:24:18.17:0,18,498	1/1:8,24:31:67.63:1209,68,0	1/1:7,33:40:99:1729,102,0	1/1:8,55:64:87.57:2038,88,0	0/0:40,0:40:99:0,99,1215	0/0:28,0:28:69.18:0,69,877	0/0:28,0:28:56.34:0,56,707	1/1:10,14:24:48.16:800,48,0	1/1:7,48:55:99:2248,102,0	1/1:4,49:52:99:2175,129,0	1/1:2,20:22:51.17:866,51,0
chr10	77736313	.	TCAAACAAACAAA	T	4808.18	PASS	AB=0.848;AC=25;AF=0.463;AN=54;BaseQRankSum=10.181;DP=664;FS=0.578;HRun=0;HaplotypeScore=228.8447;InbreedingCoeff=0.6578;MQ=54.85;MQ0=6;MQRankSum=-7.879;QD=16.19;ReadPosRankSum=3.015;VQSLOD=3.5910;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:96.78:0,97,5054	0/0:11,0:11:15.04:0,15,700	0/0:27,0:21:6.02:0,6,187	0/0:28,0:24:6.02:0,6,162	0/1:16,5:21:6.56:95,0,7	1/1:15,11:25:9.03:311,9,0	0/0:12,6:18:4.07:0,4,12	0/1:25,2:25:87.85:88,0,320	0/0:37,0:37:63.22:0,63,3572	1/1:16,7:22:18.06:473,18,0	1/1:19,8:26:2.09:201,2,0	0/0:35,0:36:81.26:0,81,4240	0/0:26,0:26:51.16:0,51,2602	1/1:7,4:11:6.02:207,6,0	1/1:18,14:32:21.07:725,21,0	1/1:12,17:29:21.07:724,21,0	0/1:19,6:24:0.07:99,0,0	0/0:9,0:17:7.67:0,8,76	1/1:12,3:14:5.98:207,6,0	1/1:8,7:15:9.03:310,9,0	0/0:16,0:16:7.09:0,7,20	0/0:20,0:20:36.12:0,36,1934	0/0:22,0:22:45.14:0,45,2253	0/0:38,0:40:87.30:0,87,4423	./.	1/1:14,7:20:21.05:644,21,0	1/1:9,7:16:15.05:518,15,0	1/1:6,3:8:6.02:207,6,0
chr10	77736734	.	AT	A	6597.56	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=10.043;DP=430;FS=6.399;HRun=6;HaplotypeScore=62.0750;InbreedingCoeff=0.9878;MQ=88.32;MQ0=0;MQRankSum=-3.345;QD=27.72;ReadPosRankSum=2.210;VQSLOD=5.5768;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.22:0,96,1207	0/0:6,0:6:18.06:0,18,234	0/0:24,0:24:14.58:0,15,530	0/0:17,0:17:36.11:0,36,457	1/1:0,19:19:57.15:616,57,0	1/1:1,10:11:30.07:322,30,0	1/1:0,9:9:24.06:258,24,0	1/1:3,24:27:72.18:774,72,0	0/0:17,0:17:51.15:0,51,655	1/1:1,17:18:51.10:537,51,0	1/1:1,13:14:33:339,33,0	0/0:8,0:8:24.06:0,24,301	0/0:17,0:17:45.13:0,45,577	1/1:1,12:13:36.09:387,36,0	1/1:1,11:12:30.07:322,30,0	1/1:1,10:11:21.05:226,21,0	1/1:2,14:16:39.10:419,39,0	0/0:8,0:8:24.08:0,24,313	1/1:2,13:15:39.07:409,39,0	1/1:0,14:14:39.09:415,39,0	1/1:0,6:6:12.03:129,12,0	0/0:20,0:20:57.16:0,57,716	0/0:17,0:17:45.13:0,45,577	0/0:22,0:22:57.17:0,57,736	1/1:4,7:11:26.66:268,27,0	1/1:3,16:19:48.08:498,48,0	1/1:1,17:18:48.12:519,48,0	1/1:0,5:5:15.04:161,15,0
chr10	77738171	.	C	CT	7123.29	PASS	AB=0.591;AC=31;AF=0.554;AN=56;BaseQRankSum=-12.439;DP=530;FS=19.278;HRun=10;HaplotypeScore=49.9890;InbreedingCoeff=0.7836;MQ=78.45;MQ0=0;MQRankSum=-0.796;QD=20.53;ReadPosRankSum=-0.350;VQSLOD=3.4826;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:59.85:0,60,484	0/0:16,0:16:38.92:0,39,316	0/0:16,0:14:8.12:0,8,91	0/0:11,0:12:11.32:0,11,85	1/1:8,14:22:20.47:423,20,0	1/1:2,11:13:14.48:330,14,0	1/1:8,13:21:39.10:416,39,0	1/1:10,19:29:12.86:500,13,0	0/0:16,0:16:47.95:0,48,394	1/1:5,15:20:45.11:480,45,0	1/1:5,12:17:11.45:327,11,0	0/0:12,0:13:29:0,29,228	0/0:12,0:12:29.93:0,30,243	1/1:4,11:15:10.56:297,11,0	1/1:3,16:19:39.10:416,39,0	1/1:1,15:16:39.10:416,39,0	1/1:7,22:29:45.11:480,45,0	0/0:22,0:22:50.86:0,51,410	0/1:4,15:19:1.21:377,0,1	1/1:5,23:28:67.33:682,67,0	0/1:6,8:14:40.78:223,0,41	0/0:15,1:16:9.98:0,10,288	0/0:21,0:22:49.96:0,50,400	0/0:8,0:8:14.97:0,15,123	1/1:4,18:22:45.11:480,45,0	1/1:3,19:22:35.44:561,35,0	1/1:3,16:19:36.07:374,36,0	0/1:6,16:22:7.18:342,0,7
chr10	77738786	.	CAT	C	13153.08	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=10.726;DP=566;FS=5.049;HRun=0;HaplotypeScore=70.4729;InbreedingCoeff=0.9961;MQ=87.90;MQ0=0;MQRankSum=-3.458;QD=38.91;ReadPosRankSum=1.017;VQSLOD=6.4182;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,124,2303	0/0:7,0:7:21.04:0,21,338	0/0:17,0:17:51.08:0,51,752	0/0:25,0:25:61.67:0,62,1217	1/1:0,18:18:47.85:733,48,0	1/1:0,21:20:48.16:733,48,0	1/1:0,20:20:57.19:872,57,0	1/1:1,42:43:99:1721,123,0	0/0:18,0:18:54.17:0,54,985	1/1:0,26:26:78.26:1190,78,0	1/1:0,11:11:33.11:505,33,0	0/0:22,0:22:63.20:0,63,1165	0/0:26,0:26:72.22:0,72,1320	1/1:0,16:15:45.15:688,45,0	1/1:3,17:20:33.11:493,33,0	1/1:2,13:15:39.13:596,39,0	1/1:0,29:29:63.21:963,63,0	0/0:16,0:16:42.09:0,42,739	1/1:2,16:18:48.15:712,48,0	1/1:0,10:10:30.10:459,30,0	1/1:0,45:45:99:1790,117,0	0/0:15,0:15:42.14:0,42,797	0/0:13,0:13:39.07:0,39,648	0/0:24,0:23:69.24:0,69,1332	1/1:0,6:6:15.05:229,15,0	1/1:2,18:19:51.17:780,51,0	1/1:0,11:11:21.07:321,21,0	1/1:0,9:9:24.08:367,24,0
chr10	77738946	.	CTA	C	2446.03	PASS	AC=32;AF=0.593;AN=54;BaseQRankSum=5.625;DP=269;FS=4.059;HRun=0;HaplotypeScore=70.2864;InbreedingCoeff=0.7682;MQ=64.38;MQ0=3;MQRankSum=-4.599;QD=15.68;ReadPosRankSum=0.685;VQSLOD=3.1894;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:54.14:0,54,874	0/0:4,0:4:12.04:0,12,208	0/0:4,0:2:3.01:0,3,52	0/0:20,0:14:20.41:0,20,227	1/1:1,6:6:2.99:23,3,0	1/1:6,11:13:12.01:126,12,0	1/1:2,3:5:3.01:33,3,0	1/1:15,7:19:47.99:531,48,0	0/0:9,0:9:24.07:0,24,389	1/1:4,3:7:17.97:190,18,0	1/1:1,13:14:3.01:38,3,0	0/0:7,0:7:21.07:0,21,373	0/0:5,0:5:12.04:0,12,201	1/1:3,2:4:7.82:69,8,0	1/1:1,3:4:6.02:78,6,0	./.	1/1:5,4:8:3.01:38,3,0	0/0:21,0:21:51.03:0,51,764	1/1:5,3:8:18.06:241,18,0	1/1:2,5:7:9.03:121,9,0	1/1:1,1:2:3.01:38,3,0	0/0:4,0:4:8.77:0,9,118	0/0:5,0:5:9.03:0,9,160	0/0:3,0:3:9.03:0,9,153	1/1:3,12:14:24.08:308,24,0	1/1:5,12:16:38.98:442,39,0	1/1:3,5:8:17.54:199,18,0	1/1:6,3:9:14.72:168,15,0
chr10	77738950	.	A	ATC	2243.66	PASS	AC=32;AF=0.593;AN=54;BaseQRankSum=6.519;DP=266;FS=6.193;HRun=0;HaplotypeScore=71.5481;InbreedingCoeff=0.7745;MQ=62.58;MQ0=4;MQRankSum=-5.348;QD=14.11;ReadPosRankSum=0.873;VQSLOD=2.9491;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:57.13:0,57,798	0/0:4,0:4:12.04:0,12,183	0/0:3,0:1:3.01:0,3,45	0/0:17,0:12:22.15:0,22,205	1/1:7,1:7:3.01:55,3,0	1/1:14,2:12:12.02:148,12,0	1/1:4,0:4:3.01:38,3,0	1/1:27,0:20:50.39:410,50,0	0/0:9,0:9:24.07:0,24,346	1/1:8,0:7:17.05:158,17,0	1/1:14,0:14:3:29,3,0	0/0:7,0:7:21.07:0,21,321	0/0:5,0:5:12.04:0,12,181	1/1:4,1:4:8.90:66,9,0	1/1:5,0:5:6.01:70,6,0	./.	1/1:5,4:8:3.01:30,3,0	0/0:19,0:19:49.35:0,49,660	1/1:6,1:7:17.84:198,18,0	1/1:6,1:7:9.02:111,9,0	1/1:1,0:1:3:29,3,0	0/0:3,0:3:9.03:0,9,138	0/0:5,0:5:12.03:0,12,163	0/0:3,0:3:9.03:0,9,138	1/1:16,0:14:23.83:204,24,0	1/1:13,2:14:39.11:526,39,0	1/1:6,2:8:17.70:196,18,0	1/1:7,2:9:14.42:173,14,0
chr10	77738954	.	CTA	C	1593.40	PASS	AC=32;AF=0.615;AN=52;BaseQRankSum=8.151;DP=242;FS=9.191;HRun=0;HaplotypeScore=71.1843;InbreedingCoeff=0.6832;MQ=62.74;MQ0=4;MQRankSum=-3.746;QD=10.99;ReadPosRankSum=2.121;VQSLOD=2.4412;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:51.15:0,51,853	0/0:4,0:4:9.03:0,9,147	./.	0/0:15,1:11:2.75:0,3,32	1/1:2,6:7:2.99:23,3,0	1/1:3,11:10:6:62,6,0	1/1:0,4:4:3.01:33,3,0	1/1:15,5:13:12:130,12,0	0/0:7,0:7:21.05:0,21,340	1/1:2,4:5:12.04:141,12,0	1/1:1,13:14:3.01:38,3,0	0/0:7,0:7:21.07:0,21,368	0/0:3,0:3:6.02:0,6,104	1/1:3,2:4:4.81:30,5,0	1/1:1,3:4:3.01:38,3,0	./.	1/1:4,5:8:3.01:38,3,0	0/0:18,0:18:41.94:0,42,654	1/1:5,1:6:6.02:84,6,0	1/1:2,5:7:9.03:121,9,0	1/1:0,1:1:3.01:38,3,0	0/0:4,0:4:9.03:0,9,153	0/0:4,0:4:12.04:0,12,202	0/0:3,0:3:6.02:0,6,105	1/1:4,12:14:18.06:227,18,0	1/1:2,12:13:38.98:442,39,0	1/1:4,4:8:11.52:130,12,0	1/1:6,3:9:18.05:203,18,0
chr10	77738992	.	C	CTA	1851.57	PASS	AB=0.942;AC=13;AF=0.295;AN=44;BaseQRankSum=7.925;DP=385;FS=31.576;HRun=0;HaplotypeScore=81.8245;InbreedingCoeff=-0.0533;MQ=39.24;MQ0=30;MQRankSum=-5.117;QD=9.21;ReadPosRankSum=-3.197;VQSLOD=0.8208;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:51:0,51,765	0/0:2,0:2:6.02:0,6,86	./.	./.	0/1:7,3:9:12.79:13,0,117	1/1:12,2:11:3:25,3,0	1/1:3,0:4:2.22:7,2,0	0/1:100,0:91:99:1739,0,958	0/0:7,0:7:18.06:0,18,256	0/1:10,0:8:5.77:6,0,269	0/0:15,0:14:8.89:0,9,129	0/0:9,0:9:27.09:0,27,385	0/0:5,0:5:15.05:0,15,215	0/1:4,1:4:28.76:29,0,76	./.	./.	0/1:9,0:8:0:0,0,0	0/0:22,0:22:39.24:0,39,653	0/1:13,0:11:13.06:13,0,231	0/0:8,0:8:15.05:0,15,215	./.	0/0:3,0:3:9.03:0,9,129	0/0:5,0:5:12.04:0,12,172	0/0:2,0:2:6.02:0,6,86	./.	0/1:13,2:14:88.47:88,0,384	0/1:7,0:7:22.35:22,0,177	0/1:10,0:8:37.61:38,0,151
chr10	77738995	.	TCTATATC	T	4298.56	PASS	AB=0.895;AC=12;AF=0.240;AN=50;BaseQRankSum=4.521;DP=380;FS=28.935;HRun=0;HaplotypeScore=92.0783;InbreedingCoeff=-0.0583;MQ=41.33;MQ0=32;MQRankSum=-5.684;QD=22.51;ReadPosRankSum=-3.206;VQSLOD=1.6843;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:58.44:0,58,1994	0/0:2,0:2:6.02:0,6,194	0/0:18,0:3:3.01:0,3,52	0/0:38,0:1:2.74:0,3,12	0/1:10,1:10:9.85:10,0,244	1/1:16,2:13:3:25,3,0	1/1:5,0:4:2.22:7,2,0	0/1:46,53:89:99:3814,0,2098	0/0:6,0:6:18.06:0,18,593	0/1:10,1:9:52.57:53,0,551	0/0:11,2:12:8.88:0,9,338	0/0:10,0:10:30.10:0,30,1035	0/0:5,0:5:15.05:0,15,487	0/1:5,0:4:37.09:37,0,192	./.	./.	0/0:7,1:7:0.47:0,0,1	0/0:20,0:20:36.63:0,37,1678	0/1:10,0:8:57.83:58,0,519	0/0:5,1:6:15.05:0,15,420	0/0:1,0:1:2.74:0,3,12	0/0:4,0:4:12.04:0,12,401	0/0:5,0:5:15.05:0,15,494	0/0:2,0:2:6.02:0,6,158	./.	0/1:12,2:13:99:107,0,856	0/1:7,1:8:57.66:58,0,345	0/1:9,1:8:99:131,0,371
chr10	77738999	.	TATC	T	1255.02	PASS	AB=0.990;AC=8;AF=0.160;AN=50;BaseQRankSum=9.674;DP=385;FS=30.221;HRun=0;HaplotypeScore=84.8123;InbreedingCoeff=0.0613;MQ=41.73;MQ0=31;MQRankSum=-5.494;QD=7.84;ReadPosRankSum=-3.359;VQSLOD=0.2096;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,1:24:57.67:0,58,1246	0/0:2,0:2:6.02:0,6,136	0/0:18,0:3:3.01:0,3,63	0/0:38,1:1:2.68:0,3,11	0/0:10,0:9:12.04:0,12,235	0/1:15,1:11:0:0,0,0	1/1:5,0:4:0.47:2,0,0	0/1:97,0:88:99:1296,0,1498	0/0:7,0:7:21.07:0,21,414	0/1:12,0:10:13.74:14,0,442	0/0:14,0:13:11.50:0,11,213	0/0:10,0:10:30.10:0,30,667	0/0:6,0:6:18.06:0,18,406	0/0:5,0:4:6.02:0,6,135	./.	./.	0/0:8,0:7:0:0,0,0	0/0:20,0:20:30.42:0,30,1117	0/1:10,0:8:1.29:1,0,397	0/0:6,0:6:15.05:0,15,338	0/0:0,1:1:2.22:0,2,7	0/0:4,0:4:12.04:0,12,272	0/0:6,0:6:18.06:0,18,374	0/0:2,0:2:5.05:0,5,74	./.	0/0:15,0:14:15.24:0,15,654	0/1:10,0:10:16.17:16,0,284	0/1:10,0:8:28.56:29,0,253
chr10	77739017	.	CTA	C	653.86	PASS	AB=0.845;AC=9;AF=0.188;AN=48;BaseQRankSum=-1.941;DP=413;FS=3.074;HRun=0;HaplotypeScore=79.8132;InbreedingCoeff=0.1851;MQ=54.25;MQ0=24;MQRankSum=1.419;QD=5.03;ReadPosRankSum=-5.317;VQSLOD=0.8172;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:63.19:0,63,1101	0/0:3,0:3:9.02:0,9,135	0/0:19,0:4:3.01:0,3,55	0/0:53,0:11:9.37:0,9,86	0/0:13,0:12:20.12:0,20,120	1/1:10,7:13:9.03:129,9,0	1/1:3,3:5:3.01:43,3,0	0/1:54,4:56:99:134,0,884	0/0:8,0:8:24.08:0,24,429	0/1:14,0:13:97.28:97,0,232	0/0:18,0:17:17.86:0,18,100	0/0:9,0:9:27.09:0,27,485	0/0:8,0:8:24.08:0,24,422	0/0:8,0:7:8.02:0,8,54	./.	./.	./.	0/0:24,0:24:69.22:0,69,1216	0/1:11,4:12:99:180,0,129	0/0:10,0:10:21.08:0,21,138	0/1:0,2:2:7.53:37,0,8	0/0:5,0:5:15.04:0,15,245	0/0:6,0:6:18.06:0,18,314	0/0:3,0:3:6.49:0,6,110	./.	0/1:18,0:17:99:167,0,233	0/0:13,0:13:15.32:0,15,160	0/0:12,0:11:13.25:0,13,134
chr10	77739019	.	A	ATATC	4533.53	PASS	AB=0.818;AC=26;AF=0.520;AN=50;BaseQRankSum=-5.582;DP=401;FS=7.162;HRun=0;HaplotypeScore=66.5397;InbreedingCoeff=0.7484;MQ=59.78;MQ0=21;MQRankSum=2.089;QD=22.78;ReadPosRankSum=-0.110;VQSLOD=3.5452;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:55.04:0,55,903	0/0:3,0:3:9.02:0,9,129	0/0:20,0:5:2.99:0,3,50	0/0:54,0:13:11.86:0,12,88	1/1:3,10:12:12.04:305,12,0	1/1:16,0:12:8.89:129,9,0	1/1:6,0:5:3.01:43,3,0	0/1:38,0:36:99:162,0,334	0/0:8,0:8:24.08:0,24,406	1/1:4,10:13:30.10:629,30,0	1/1:7,11:18:12.04:305,12,0	0/0:9,0:9:24.07:0,24,378	0/0:8,0:8:24.08:0,24,406	1/1:2,6:7:6.02:152,6,0	./.	./.	0/1:6,0:13:0:0,0,0	0/0:24,0:24:66.22:0,66,1095	1/1:11,5:13:25.52:608,26,0	1/1:1,9:10:15.05:381,15,0	1/1:2,0:2:6.02:119,6,0	0/0:5,0:5:15.02:0,15,205	0/0:6,0:6:15.05:0,15,256	0/0:3,0:3:9.03:0,9,142	./.	1/1:2,14:16:48.16:979,48,0	1/1:2,10:13:21.07:533,21,0	1/1:8,5:13:9.03:188,9,0
chr10	77739023	.	C	CTA	537.56	PASS	AB=0.970;AC=16;AF=0.308;AN=52;BaseQRankSum=6.814;DP=403;FS=10.403;HRun=0;HaplotypeScore=68.7530;InbreedingCoeff=0.1076;MQ=65.58;MQ0=17;MQRankSum=-0.511;QD=3.02;ReadPosRankSum=4.790;VQSLOD=0.5133;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:53.99:0,54,791	0/0:3,0:3:9.03:0,9,128	0/0:18,0:6:3.01:0,3,43	0/0:55,0:17:18.53:0,19,188	1/1:14,0:13:11.77:73,12,0	0/0:13,3:13:8.54:0,9,45	0/1:4,1:4:8.72:9,0,9	0/1:33,0:32:35.10:35,0,523	0/0:8,0:8:24.08:0,24,344	0/1:13,0:12:64.63:75,0,65	0/1:20,0:19:52.02:52,0,52	0/0:9,0:9:24.08:0,24,343	0/0:8,0:8:24.08:0,24,344	1/1:8,0:7:5.88:36,6,0	./.	./.	0/1:11,2:12:0:0,0,0	0/0:25,0:25:74.91:0,75,999	0/1:16,0:13:58.36:58,0,73	0/1:11,0:11:7.21:74,0,7	0/1:2,0:2:9.11:12,0,9	0/0:5,0:5:15.05:0,15,213	0/0:6,0:6:15.05:0,15,215	0/0:3,0:3:2.07:0,2,80	0/0:21,0:19:8.99:0,9,76	0/1:17,0:17:57.69:116,0,58	1/1:13,0:13:20.27:127,20,0	0/1:13,0:12:25.59:26,0,50
chr10	77739587	.	GC	G	4282.88	PASS	AB=0.970;AC=21;AF=0.375;AN=56;BaseQRankSum=-2.168;DP=573;FS=2.083;HRun=10;HaplotypeScore=76.6472;InbreedingCoeff=0.8968;MQ=81.92;MQ0=1;MQRankSum=1.053;QD=17.85;ReadPosRankSum=2.988;VQSLOD=5.6164;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:15.84:0,16,562	0/0:5,0:5:12.01:0,12,116	0/1:31,1:27:46.93:47,0,259	0/0:25,1:24:7.24:0,7,182	1/1:5,16:22:38.02:400,38,0	0/0:3,0:17:34.26:0,34,189	0/0:8,1:23:15.44:0,15,237	0/0:9,0:18:14.33:0,14,77	0/0:20,0:20:54.08:0,54,567	1/1:2,24:26:71.98:625,72,0	1/1:3,18:21:39.07:427,39,0	0/0:24,1:25:43.08:0,43,675	0/0:21,0:21:60.14:0,60,647	1/1:4,16:20:40.84:384,41,0	0/0:7,0:17:14.52:0,15,100	0/0:3,0:14:20.69:0,21,138	0/0:8,0:28:49.29:0,49,348	0/0:2,0:21:40.18:0,40,229	1/1:1,12:13:35.93:302,36,0	1/1:1,18:19:44.93:383,45,0	1/1:6,16:22:35.96:313,36,0	0/0:18,1:20:28.05:0,28,517	0/0:15,0:15:36.07:0,36,381	0/0:17,0:17:48.13:0,48,529	0/0:2,0:12:20.38:0,20,138	1/1:1,27:28:79.90:686,80,0	1/1:2,23:25:47.97:482,48,0	1/1:2,10:12:26.99:234,27,0
chr10	77740523	.	GA	G	6325.22	PASS	AB=0.954;AC=37;AF=0.661;AN=56;BaseQRankSum=8.641;DP=520;FS=0.000;HRun=10;HaplotypeScore=80.9457;InbreedingCoeff=0.7870;MQ=81.52;MQ0=0;MQRankSum=-3.107;QD=16.65;ReadPosRankSum=0.996;VQSLOD=5.2333;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,3:26:11.91:12,0,547	0/0:12,0:12:24.06:0,24,258	0/1:25,1:27:3.51:4,0,146	0/1:13,0:12:19.90:20,0,74	1/1:3,22:25:23.79:435,24,0	1/1:3,16:19:41.99:364,42,0	1/1:6,13:19:38.98:339,39,0	1/1:5,15:20:41.96:360,42,0	0/0:23,0:23:50.98:0,51,531	1/1:4,18:22:56.98:494,57,0	1/1:1,14:15:32.97:286,33,0	0/0:15,0:15:36.07:0,36,382	0/0:20,0:23:59.58:0,60,568	1/1:1,19:20:50.98:442,51,0	1/1:2,14:16:38.97:338,39,0	1/1:1,13:14:32.97:286,33,0	1/1:2,12:14:23.98:208,24,0	0/0:15,0:15:45.10:0,45,482	1/1:7,10:17:41.94:355,42,0	1/1:2,28:30:80.89:689,81,0	1/1:1,10:11:20.99:182,21,0	0/0:16,0:18:41.93:0,42,437	0/0:12,0:12:27.07:0,27,299	0/0:22,0:22:57.09:0,57,607	1/1:1,14:15:35.98:312,36,0	1/1:5,16:21:47.99:416,48,0	1/1:3,29:32:77.97:677,78,0	1/1:0,4:4:12:104,12,0
chr10	77742090	.	GA	G	9947.59	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=9.389;DP=615;FS=6.254;HRun=8;HaplotypeScore=62.4824;InbreedingCoeff=0.9984;MQ=79.34;MQ0=0;MQRankSum=-1.064;QD=24.93;ReadPosRankSum=2.256;VQSLOD=5.7940;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:27:43.24:0,43,805	0/0:8,0:8:21.06:0,21,254	0/0:20,0:20:29.99:0,30,312	0/0:20,0:20:42.11:0,42,477	1/1:6,25:31:66.10:637,66,0	1/1:1,19:20:54.09:522,54,0	1/1:4,24:28:63.10:608,63,0	1/1:5,38:43:99:1088,114,0	0/0:20,0:20:48.15:0,48,580	1/1:6,22:28:66.10:637,66,0	1/1:2,16:18:48.08:464,48,0	0/0:28,0:28:65.26:0,65,893	0/0:18,0:18:54.17:0,54,652	1/1:2,15:17:45.07:435,45,0	1/1:1,17:18:45.07:435,45,0	1/1:1,24:25:66.11:637,66,0	1/1:0,27:27:78.13:753,78,0	0/0:17,1:18:22.06:0,22,518	1/1:0,13:13:36.04:341,36,0	1/1:3,22:25:57.07:550,57,0	1/1:1,13:14:36.05:348,36,0	0/0:22,0:22:66.20:0,66,791	0/0:26,0:26:78.18:0,78,895	0/0:9,0:9:24.07:0,24,290	1/1:1,27:28:78.13:753,78,0	1/1:3,30:33:90.14:869,90,0	1/1:1,21:22:63.10:608,63,0	1/1:0,9:9:27.04:261,27,0
chr10	77746724	.	TTGTGTGTG	T	4868.72	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=6.060;DP=672;FS=5.921;HRun=0;HaplotypeScore=181.1530;InbreedingCoeff=0.9057;MQ=60.98;MQ0=8;MQRankSum=-6.978;QD=21.83;ReadPosRankSum=0.148;VQSLOD=3.6284;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:45:0,45,1325	0/0:8,0:14:24.08:0,24,725	0/0:30,0:18:9.03:0,9,204	0/0:34,0:17:3.01:0,3,85	1/1:6,10:18:24.04:450,24,0	0/0:24,0:28:10.92:0,11,309	0/0:20,0:23:6.08:0,6,125	0/0:25,0:25:18.06:0,18,527	0/0:17,0:16:30.10:0,30,949	1/1:20,14:34:29.88:614,30,0	1/1:14,13:26:30.10:746,30,0	0/0:21,0:22:45.15:0,45,1598	0/0:17,0:27:14.61:0,15,473	1/1:10,13:24:32.98:805,33,0	0/0:36,0:36:39.60:0,40,1243	0/0:20,0:26:18.06:0,18,566	0/0:30,0:30:30.08:0,30,831	0/0:17,0:16:21.50:0,22,540	1/1:14,4:18:12.01:248,12,0	1/1:18,9:27:26.96:480,27,0	1/1:22,1:23:5.98:96,6,0	0/0:24,0:26:50.89:0,51,1707	0/0:17,0:17:29.91:0,30,1121	0/0:20,0:21:39.13:0,39,1381	0/0:27,0:26:14.91:0,15,479	1/1:12,12:23:36.09:751,36,0	1/1:11,10:21:17.74:454,18,0	1/1:2,5:7:9.03:227,9,0
chr10	77747347	.	C	CGT	6615	PASS	AB=0.719;AC=19;AF=0.339;AN=56;BaseQRankSum=0.176;DP=704;FS=1.628;HRun=0;HaplotypeScore=116.2675;InbreedingCoeff=0.7537;MQ=67.65;MQ0=0;MQRankSum=-0.174;QD=20.48;ReadPosRankSum=-0.746;VQSLOD=4.7392;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:60.04:0,60,664	0/0:6,0:7:17.70:0,18,146	0/1:22,0:15:2.15:2,0,65	0/0:16,0:13:1.30:0,1,19	1/1:3,18:21:33.11:528,33,0	0/0:18,0:18:45.06:0,45,503	0/0:40,0:42:99:0,102,1134	0/0:31,0:32:46.86:0,47,446	0/0:23,0:23:35.99:0,36,376	1/1:4,24:29:78.04:1003,78,0	1/1:3,10:13:9.03:144,9,0	0/0:23,0:23:45.06:0,45,501	0/0:25,0:25:49.30:0,49,529	1/1:10,35:46:31.28:748,31,0	0/0:26,0:26:65.99:0,66,688	0/0:20,0:20:48:0,48,509	0/0:26,0:26:69.03:0,69,747	0/0:28,0:28:62.96:0,63,685	1/1:5,18:24:18.05:558,18,0	0/1:9,21:31:21.55:669,0,22	1/1:15,48:63:15.03:1042,15,0	0/0:13,0:13:30.03:0,30,330	0/0:12,0:12:15.03:0,15,169	0/0:17,0:18:7.90:0,8,287	0/0:17,0:19:44.80:0,45,445	0/1:10,26:39:4.10:1110,0,4	1/1:5,13:19:34.89:524,35,0	1/1:4,12:16:18.06:288,18,0
chr10	77749609	.	A	AAAT	1860.35	PASS	AB=0.713;AC=30;AF=0.652;AN=46;BaseQRankSum=-1.638;DP=230;FS=9.517;HRun=0;HaplotypeScore=38.7285;InbreedingCoeff=0.4301;MQ=82.06;MQ0=2;MQRankSum=-2.932;QD=12.49;ReadPosRankSum=-1.982;VQSLOD=1.3695;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:16:20.83:0,21,147	0/0:1,0:5:8.93:0,9,63	./.	./.	1/1:6,0:6:3.01:58,3,0	0/1:7,0:11:9.64:141,0,10	1/1:2,0:3:3.01:39,3,0	1/1:35,0:35:18.49:211,18,0	0/0:4,0:4:3.01:0,3,40	1/1:6,0:6:3.01:58,3,0	1/1:4,3:7:9.03:158,9,0	0/0:9,0:10:9:0,9,100	0/0:3,0:3:6.02:0,6,79	1/1:3,0:5:3.01:39,3,0	./.	1/1:7,0:7:3:25,3,0	1/1:12,0:19:12.72:190,13,0	1/1:9,0:11:9.03:114,9,0	1/1:1,3:4:9.03:173,9,0	1/1:2,2:4:6.02:88,6,0	./.	./.	0/0:1,0:3:2.98:0,3,21	0/0:4,0:5:2.98:0,3,21	1/1:4,0:6:3.01:39,3,0	1/1:5,2:7:6.02:116,6,0	0/1:5,4:9:24.67:216,0,25	1/1:2,7:9:18.06:346,18,0
chr10	77749836	.	G	GT	6842.23	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-1.599;DP=396;FS=3.182;HRun=3;HaplotypeScore=52.5562;InbreedingCoeff=0.9754;MQ=82.31;MQ0=0;MQRankSum=-1.678;QD=28.51;ReadPosRankSum=0.166;VQSLOD=3.8524;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:64.73:0,65,776	0/0:6,0:6:18.05:0,18,215	0/0:19,0:19:10.26:0,10,262	0/0:10,0:9:16.79:0,17,166	1/1:3,9:13:30.72:328,31,0	1/1:18,0:18:45.08:441,45,0	1/1:13,0:13:33.07:327,33,0	1/1:30,0:30:84.10:819,84,0	0/0:15,0:15:39.07:0,39,422	1/1:1,17:18:51.12:675,51,0	1/1:0,4:4:9.03:126,9,0	0/0:17,0:18:48:0,48,526	0/0:11,0:11:33.10:0,33,393	1/1:1,14:15:33.11:461,33,0	1/1:16,2:18:42.08:433,42,0	1/1:13,1:14:36.08:372,36,0	1/1:12,0:12:24.04:237,24,0	0/0:14,0:14:42.08:0,42,465	1/1:2,9:11:27.02:306,27,0	1/1:1,8:9:23.99:288,24,0	1/1:1,5:6:12.04:167,12,0	0/0:14,0:14:39.06:0,39,418	0/0:8,0:8:24.01:0,24,257	0/0:15,0:15:36.08:0,36,405	1/1:11,1:12:24.05:251,24,0	1/1:0,17:17:51.14:690,51,0	1/1:1,22:23:48.63:670,49,0	1/1:1,6:7:18.06:250,18,0
chr10	77749839	.	T	TTA	7308.83	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-2.937;DP=401;FS=7.559;HRun=0;HaplotypeScore=58.8044;InbreedingCoeff=0.9792;MQ=80.38;MQ0=0;MQRankSum=-5.235;QD=29.95;ReadPosRankSum=1.721;VQSLOD=6.3394;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:71:0,71,1013	0/0:6,0:6:18.06:0,18,286	0/0:16,0:17:24.94:0,25,328	0/0:10,0:9:16.73:0,17,207	1/1:12,0:13:30.47:204,30,0	1/1:0,19:19:45.15:898,45,0	1/1:0,14:14:33.11:662,33,0	1/1:0,29:32:93.19:1513,93,0	0/0:17,0:17:44.91:0,45,566	1/1:18,0:18:31.68:309,32,0	1/1:4,0:4:8.87:56,9,0	0/0:19,0:19:53.82:0,54,725	0/0:12,0:12:36.10:0,36,538	1/1:14,0:14:32.52:205,33,0	1/1:3,15:19:42.03:721,42,0	1/1:2,14:16:36.07:679,36,0	1/1:1,10:13:15.80:453,16,0	0/0:16,0:16:45.04:0,45,615	1/1:10,0:10:22.58:147,23,0	1/1:8,0:8:23.72:172,24,0	1/1:5,0:5:11.82:75,12,0	0/0:14,0:14:42.05:0,42,545	0/0:8,0:8:24.01:0,24,329	0/0:12,0:14:39.08:0,39,549	1/1:1,12:13:24.06:445,24,0	1/1:17,0:17:50.37:365,50,0	1/1:23,0:23:44.54:293,45,0	1/1:6,0:6:17.72:111,18,0
chr10	77749999	.	CG	C	11912.82	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=11.734;DP=572;FS=0.667;HRun=3;HaplotypeScore=57.6767;InbreedingCoeff=0.9965;MQ=83.02;MQ0=0;MQRankSum=-2.219;QD=33.00;ReadPosRankSum=0.926;VQSLOD=5.1009;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,1593	0/0:5,0:5:15.05:0,15,216	0/0:16,0:16:36.15:0,36,580	0/0:21,0:21:45.16:0,45,720	1/1:0,23:23:69.21:848,69,0	1/1:0,14:14:36.11:446,36,0	1/1:0,32:32:84.26:1041,84,0	1/1:0,22:22:63.18:762,63,0	0/0:8,0:8:21.07:0,21,302	1/1:1,21:22:60.19:744,60,0	1/1:1,10:11:30.09:369,30,0	0/0:21,0:21:60.17:0,60,826	0/0:24,0:24:72.24:0,72,1035	1/1:1,22:23:51.16:629,51,0	1/1:1,18:19:54.17:669,54,0	1/1:0,16:16:39.12:483,39,0	1/1:0,42:42:99:1338,108,0	0/0:19,0:19:54.17:0,54,755	1/1:4,15:19:42.11:501,42,0	1/1:0,13:13:36.11:445,36,0	1/1:0,33:33:90.28:1115,90,0	0/0:10,0:10:27.09:0,27,388	0/0:10,0:10:30.10:0,30,423	0/0:36,0:36:99:0,108,1547	1/1:2,17:19:51.16:630,51,0	1/1:0,26:26:78.24:962,78,0	1/1:0,19:19:51.16:631,51,0	1/1:0,8:8:24.08:297,24,0
chr10	77750002	.	GT	G	3873.23	PASS	AB=0.976;AC=32;AF=0.571;AN=56;BaseQRankSum=17.250;DP=584;FS=0.997;HRun=1;HaplotypeScore=85.5862;InbreedingCoeff=0.8347;MQ=81.34;MQ0=0;MQRankSum=-3.019;QD=10.44;ReadPosRankSum=3.056;VQSLOD=1.7653;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1769	0/0:5,0:5:15.05:0,15,234	0/0:16,0:16:41.32:0,41,654	0/0:19,0:19:54.05:0,54,796	1/1:23,0:23:65.05:345,65,0	1/1:14,0:14:33.22:153,33,0	1/1:33,0:33:56.64:337,57,0	1/1:23,0:23:27.32:191,27,0	0/0:8,0:8:24.06:0,24,352	1/1:21,0:21:51.06:208,51,0	1/1:11,1:12:6.58:145,7,0	0/0:20,0:20:57.19:0,57,886	0/0:25,0:25:75.24:0,75,1150	1/1:23,1:24:27.35:246,27,0	1/1:19,0:19:27.98:207,28,0	1/1:17,0:17:13.72:134,14,0	1/1:42,0:42:99:475,100,0	0/0:18,0:18:51.17:0,51,797	0/1:19,1:20:51.15:117,0,51	1/1:13,0:13:18.81:167,19,0	1/1:34,0:34:62.45:367,62,0	0/0:10,0:10:30.08:0,30,418	0/0:12,0:12:35.99:0,36,457	0/0:40,0:40:99:0,120,1706	1/1:17,1:18:47.29:243,47,0	1/1:28,0:28:20.08:249,20,0	0/1:22,0:22:17.13:181,0,17	1/1:8,0:8:22.44:108,22,0
chr10	77751627	.	C	CTCTCTG	1397.82	PASS	AB=1.000;AC=17;AF=0.327;AN=52;BaseQRankSum=1.547;DP=669;FS=1.351;HRun=0;HaplotypeScore=157.2681;InbreedingCoeff=0.4515;MQ=50.58;MQ0=56;MQRankSum=-5.892;QD=5.71;ReadPosRankSum=-0.454;VQSLOD=2.5843;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:32:51.84:0,52,980	0/0:9,0:9:12:0,12,143	0/0:24,0:13:11.27:0,11,75	0/0:38,0:15:12.23:0,12,82	./.	0/1:26,0:22:0.90:1,0,18	0/0:24,0:17:16.12:0,16,111	0/1:46,0:33:99:116,0,202	0/0:28,0:25:42.03:0,42,729	0/1:20,0:17:56.41:307,0,56	./.	0/0:33,0:27:42.09:0,42,762	0/0:38,0:34:27.83:0,28,1111	1/1:15,0:11:9.03:132,9,0	0/0:30,0:24:8.97:0,9,70	0/1:22,0:20:22.84:23,0,46	0/0:26,0:17:10.30:0,10,65	0/0:22,0:17:27.65:0,28,422	1/1:21,0:14:30:501,30,0	1/1:15,0:12:5.96:45,6,0	1/1:36,0:29:6.31:73,6,0	0/0:12,0:11:9.02:0,9,156	0/0:20,0:14:30.09:0,30,573	0/0:44,0:39:81.24:0,81,1591	0/0:9,0:8:8.95:0,9,68	0/1:10,0:7:45.84:126,0,46	1/1:21,0:16:3.01:48,3,0	1/1:4,7:11:9.03:194,9,0
chr10	77751633	.	GTCTCTCTCTCTCTGTCTCTC	G	1522.20	PASS	AB=0.987;AC=17;AF=0.327;AN=52;BaseQRankSum=1.078;DP=678;FS=0.639;HRun=0;HaplotypeScore=227.1359;InbreedingCoeff=0.5315;MQ=44.28;MQ0=67;MQRankSum=-6.617;QD=6.53;ReadPosRankSum=-2.101;VQSLOD=2.3466;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:36:58.67:0,59,1863	0/0:9,0:9:11.67:0,12,121	0/0:16,0:8:6.47:0,6,55	0/0:31,0:11:10.89:0,11,79	./.	0/1:24,0:21:1.73:2,0,18	0/0:26,0:16:16.12:0,16,111	0/1:49,0:33:99:132,0,138	0/0:30,0:26:37.77:0,38,1320	0/1:19,0:16:72.33:352,0,72	./.	0/0:29,0:23:41.22:0,41,1247	0/0:36,0:34:65.37:0,65,2214	1/1:14,0:10:9.03:132,9,0	0/0:27,0:22:8.96:0,9,70	0/0:20,0:17:16.27:0,16,71	0/0:24,0:14:0.12:0,0,17	0/0:24,0:18:23.31:0,23,420	1/1:24,0:15:12.43:515,12,0	1/1:18,0:15:5.96:45,6,0	1/1:38,0:28:7.08:76,7,0	0/0:11,0:10:8.81:0,9,188	0/0:21,0:14:30.09:0,30,1029	0/0:47,0:39:81.26:0,81,3226	0/0:9,0:8:8.95:0,9,68	1/1:11,0:8:0.31:168,0,0	1/1:19,0:16:3.01:86,3,0	1/1:13,0:11:9.03:178,9,0
chr10	77751641	.	C	CTG	1102.24	PASS	AB=0.858;AC=11;AF=0.212;AN=52;BaseQRankSum=-0.942;DP=663;FS=6.273;HRun=0;HaplotypeScore=119.6737;InbreedingCoeff=0.3984;MQ=36.97;MQ0=77;MQRankSum=-2.017;QD=5.99;ReadPosRankSum=-3.095;VQSLOD=2.2827;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:33:48.28:0,48,785	0/0:10,0:12:14.74:0,15,150	0/0:7,0:2:5.03:0,5,30	0/0:18,0:4:4.63:0,5,68	./.	1/1:10,15:21:2.84:54,3,0	1/1:23,2:14:18.49:257,18,0	0/1:40,10:24:99:346,0,243	0/0:29,0:25:39.60:0,40,587	0/0:16,0:14:30.86:0,31,289	./.	0/0:32,0:23:48.11:0,48,648	0/0:40,0:36:74.96:0,75,1014	0/0:12,0:8:6.41:0,6,44	1/1:20,8:21:6.01:116,6,0	0/1:20,4:21:16.99:253,0,17	0/1:20,3:11:9.24:141,0,9	0/0:24,0:19:14.88:0,15,281	0/0:29,0:16:33.68:0,34,311	0/0:16,0:15:2.97:0,3,20	0/0:31,0:23:5.97:0,6,46	0/0:13,0:12:8.69:0,9,116	0/0:24,1:17:33.08:0,33,460	0/0:49,0:38:84.25:0,84,1237	1/1:9,0:8:6:82,6,0	0/0:12,0:8:5.53:0,6,170	0/0:11,0:14:2.94:0,3,18	0/0:9,0:9:8.51:0,9,47
chr10	77751653	.	C	CTG	250.47	PASS	AB=0.912;AC=9;AF=0.196;AN=46;BaseQRankSum=6.370;DP=659;FS=4.291;HRun=0;HaplotypeScore=130.8317;InbreedingCoeff=0.1204;MQ=33.34;MQ0=88;MQRankSum=-5.024;QD=1.34;ReadPosRankSum=-3.004;VQSLOD=1.6682;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:33:55.09:0,55,779	0/1:11,0:11:23.05:23,0,26	./.	./.	./.	1/1:18,5:18:3.01:54,3,0	1/1:20,1:8:0.42:0,0,0	0/1:55,0:21:69.41:69,0,179	0/0:33,0:28:36.50:0,36,528	0/0:17,0:14:6.11:0,6,161	./.	0/0:31,0:22:50.94:0,51,696	0/0:41,0:35:74.74:0,75,1143	0/0:10,0:5:0.47:0,0,1	0/1:22,6:20:0.26:0,0,0	0/1:17,7:20:29.43:173,0,29	0/1:24,1:10:37.91:38,0,44	0/0:25,0:20:0.32:0,0,243	0/0:29,0:14:19.26:0,19,163	./.	0/0:42,0:25:3.01:0,3,46	0/0:16,0:14:5.68:0,6,70	0/0:25,0:15:24.08:0,24,366	0/0:57,0:43:84.18:0,84,1207	0/0:7,0:7:0:0,0,0	0/0:14,0:7:2.64:0,3,96	0/0:20,0:13:2.80:0,3,13	0/0:10,0:8:10.68:0,11,53
chr10	77751793	.	GTCTC	G	243.85	PASS	AB=0.900;AC=10;AF=0.294;AN=34;BaseQRankSum=-1.391;DP=640;FS=5.112;HRun=0;HaplotypeScore=52.1010;InbreedingCoeff=0.3300;MQ=22.05;MQ0=174;MQRankSum=1.082;QD=1.06;ReadPosRankSum=-0.107;VQSLOD=0.9938;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:70,0:38:29.67:0,30,574	0/0:10,0:5:2.84:0,3,14	./.	./.	./.	./.	./.	0/0:39,0:2:5.96:0,6,43	0/1:21,6:19:28.06:40,0,28	0/0:8,0:3:6.01:0,6,75	./.	1/1:35,2:20:0.46:125,0,0	1/1:34,3:24:12.29:137,12,0	0/0:10,0:3:2.90:0,3,16	0/0:21,0:10:0:0,0,0	./.	0/1:28,0:6:0.53:1,0,12	0/0:22,0:7:8.19:0,8,116	0/0:41,0:4:2.99:0,3,24	./.	1/1:50,0:14:0.47:1,0,0	./.	./.	1/1:51,0:26:5.98:46,6,0	./.	0/0:22,0:7:17.08:0,17,105	0/0:16,0:10:6.01:0,6,60	0/0:7,0:3:3:0,3,26
chr10	77751935	.	GTC	G	180.14	PASS	AB=0.909;AC=11;AF=0.306;AN=36;BaseQRankSum=2.404;DP=733;FS=8.415;HRun=0;HaplotypeScore=60.6042;InbreedingCoeff=0.2054;MQ=22.86;MQ0=193;MQRankSum=-3.824;QD=1.29;ReadPosRankSum=-0.010;VQSLOD=0.1803;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:34:9.03:0,9,133	0/1:11,1:10:0.96:30,0,1	./.	./.	./.	1/1:9,0:1:0.47:1,0,0	./.	./.	0/0:34,0:17:8.97:0,9,88	1/1:23,2:7:2.48:35,2,0	./.	0/0:47,0:27:18.06:0,18,285	0/1:32,1:20:17.64:18,0,101	0/0:13,2:5:0:0,0,0	./.	0/0:24,0:6:0:0,0,0	./.	0/0:29,1:11:2.79:0,3,13	0/0:26,1:8:15.02:0,15,158	0/1:13,3:10:9.31:9,0,32	0/0:41,2:14:6.02:0,6,71	./.	0/0:37,1:24:11.71:0,12,154	0/0:70,0:39:35.06:0,35,513	./.	0/1:18,1:9:26.98:27,0,55	1/1:15,5:13:12.04:144,12,0	0/1:5,1:3:8.73:30,0,9
chr10	77752005	.	CTG	C	30.26	PASS	AB=0.970;AC=7;AF=0.184;AN=38;BaseQRankSum=1.956;DP=633;FS=4.151;HRun=0;HaplotypeScore=66.4725;InbreedingCoeff=0.2207;MQ=25.94;MQ0=149;MQRankSum=-2.091;QD=0.25;ReadPosRankSum=-2.495;VQSLOD=1.0359;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:67,1:40:22.16:0,22,276	1/1:8,1:7:4.99:25,5,0	./.	./.	./.	0/1:9,0:4:0:0,0,0	./.	0/0:51,0:4:5.95:0,6,42	0/0:27,0:18:14.79:0,15,205	0/0:19,0:4:8.82:0,9,72	./.	0/0:38,0:24:6.65:0,7,311	0/0:42,1:31:30.47:0,30,625	0/0:3,0:3:2.68:0,3,11	./.	0/1:22,0:12:0:0,0,0	0/0:26,0:10:2.90:0,3,19	0/1:17,2:6:2.95:82,0,3	0/0:14,0:2:3.01:0,3,41	./.	./.	0/0:35,0:23:26.59:0,27,309	0/1:46,0:27:8.74:9,0,145	0/0:72,0:48:21.73:0,22,638	./.	0/1:16,0:8:12.84:13,0,47	0/0:8,0:6:5.86:0,6,26	0/0:10,0:5:5.93:0,6,41
chr10	77752043	.	GTCTC	G	424.57	PASS	AB=0.870;AC=8;AF=0.190;AN=42;BaseQRankSum=3.985;DP=687;FS=10.328;HRun=0;HaplotypeScore=90.2200;InbreedingCoeff=0.2901;MQ=29.04;MQ0=135;MQRankSum=-5.265;QD=3.72;ReadPosRankSum=-1.241;VQSLOD=0.4739;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:70,1:46:43.89:0,44,834	./.	./.	./.	./.	0/0:12,0:8:3.48:0,3,32	./.	0/0:42,0:7:20.95:0,21,195	0/0:32,0:26:30.08:0,30,488	1/1:14,2:4:8.86:120,9,0	0/0:6,1:2:0:0,0,0	0/0:43,0:35:61.89:0,62,1179	0/0:37,0:27:43.90:0,44,723	0/0:4,6:10:5.69:0,6,47	./.	1/1:25,0:14:0.47:1,0,0	0/1:27,0:14:1.65:2,0,104	0/0:27,0:13:16.05:0,16,140	0/1:13,3:5:6.97:147,0,7	./.	0/0:42,0:13:0.47:0,0,1	0/0:40,0:30:41.73:0,42,977	0/0:45,0:30:27.09:0,27,684	0/0:69,0:49:48.14:0,48,937	0/0:8,0:4:0:0,0,0	0/1:18,1:11:67.42:107,0,67	0/1:6,5:8:19.61:156,0,20	0/0:10,0:6:9.03:0,9,175
chr10	77752123	.	CTCTG	C	85.78	PASS	AB=1.000;AC=13;AF=0.283;AN=46;BaseQRankSum=3.973;DP=593;FS=33.683;HRun=0;HaplotypeScore=100.1427;InbreedingCoeff=0.1597;MQ=30.07;MQ0=116;MQRankSum=-3.947;QD=0.45;ReadPosRankSum=-3.358;VQSLOD=-0.3987;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:42:4.37:0,4,678	0/0:13,0:8:4.29:0,4,22	./.	./.	0/0:20,0:12:1.74:0,2,6	0/1:14,0:6:0:0,0,0	1/1:15,0:5:2.94:18,3,0	0/1:37,0:12:10.42:10,0,24	0/1:32,0:19:8.57:9,0,159	0/0:18,0:10:8.45:0,8,80	0/0:18,0:11:2.88:0,3,18	0/0:41,0:37:2.81:0,3,924	0/0:32,0:23:6.22:0,6,581	0/0:22,0:14:10.92:0,11,38	0/0:17,0:6:2.63:0,3,46	1/1:18,0:9:2.94:18,3,0	0/1:19,0:11:17.18:21,0,17	1/1:19,0:9:10.83:59,11,0	0/0:18,0:9:17.53:0,18,164	./.	./.	0/0:39,0:30:5.57:0,6,494	0/0:21,5:14:8.89:0,9,142	0/0:41,0:30:29.56:0,30,591	./.	0/1:12,0:6:17.30:26,0,17	0/1:15,0:9:2.99:29,0,3	0/1:9,0:4:1.14:23,0,1
chr10	77752137	.	GTCTCTCTCTCTCTCTCTCTCTC	G	2001.63	PASS	AB=0.892;AC=25;AF=0.463;AN=54;BaseQRankSum=4.108;DP=601;FS=5.321;HRun=0;HaplotypeScore=173.5570;InbreedingCoeff=0.4803;MQ=32.25;MQ0=99;MQRankSum=-1.676;QD=7.44;ReadPosRankSum=-3.228;VQSLOD=1.5879;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:42:55.14:0,55,1707	0/0:12,0:8:9.48:0,9,115	0/0:3,0:2:4.21:0,4,23	./.	0/0:20,0:13:1.24:0,1,5	1/1:22,0:13:8.81:117,9,0	1/1:16,0:6:3.01:43,3,0	0/1:30,9:18:99:260,0,100	0/0:28,0:19:15.04:0,15,204	1/1:13,4:9:12.04:174,12,0	0/1:9,11:14:0:0,0,0	0/0:38,0:35:45.67:0,46,1263	0/0:31,0:22:33.55:0,34,1028	0/0:21,0:12:8.15:0,8,24	0/1:17,0:9:10.43:113,0,10	1/1:21,0:11:9.03:139,9,0	0/1:19,0:12:13.50:233,0,14	0/0:18,0:11:23.88:0,24,226	0/1:18,0:12:99:124,0,147	1/1:12,0:9:3.01:50,3,0	1/1:22,0:10:3.01:73,3,0	0/0:36,0:28:27.08:0,27,1066	0/0:26,0:17:9.50:0,10,213	0/0:37,0:29:35.99:0,36,1057	1/1:10,0:8:6.02:86,6,0	1/1:12,0:7:15.05:275,15,0	1/1:16,0:12:14.34:390,14,0	1/1:8,0:3:6.02:104,6,0
chr10	77752149	.	C	CTG	1193.56	PASS	AB=1.000;AC=31;AF=0.574;AN=54;BaseQRankSum=7.158;DP=617;FS=6.784;HRun=0;HaplotypeScore=113.7858;InbreedingCoeff=0.4936;MQ=35.22;MQ0=85;MQRankSum=-2.218;QD=3.57;ReadPosRankSum=-0.929;VQSLOD=1.7410;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:44:59.85:0,60,652	0/0:12,0:9:6.38:0,6,39	0/1:11,0:5:0.53:1,0,19	0/0:17,0:2:2.74:0,3,12	1/1:21,0:15:2.88:25,3,0	1/1:21,0:12:8.63:59,9,0	0/1:22,0:13:2.90:43,0,3	0/1:27,0:17:59.23:59,0,118	0/1:27,0:17:16.22:16,0,100	1/1:12,0:7:11.04:86,11,0	./.	0/0:35,0:34:54.84:0,55,473	0/0:25,0:20:41.36:0,41,466	1/1:22,0:15:0.47:1,0,0	1/1:15,0:12:8.75:90,9,0	1/1:22,0:13:8.86:60,9,0	1/1:21,1:15:4.09:94,4,0	0/0:17,0:11:29.74:0,30,209	0/1:17,0:12:66.77:67,0,67	1/1:15,0:12:5.95:44,6,0	1/1:21,1:12:6.01:73,6,0	0/0:31,0:26:29.90:0,30,294	0/0:25,0:18:17.79:0,18,148	0/0:44,0:34:50.85:0,51,482	1/1:13,1:12:8.88:61,9,0	1/1:16,0:12:28.75:260,29,0	1/1:15,1:13:26.84:269,27,0	1/1:5,4:8:5.98:69,6,0
chr10	77752159	.	C	CTG	2091.17	PASS	AB=1.000;AC=30;AF=0.577;AN=52;BaseQRankSum=7.103;DP=634;FS=13.611;HRun=0;HaplotypeScore=120.5841;InbreedingCoeff=0.5999;MQ=44.90;MQ0=63;MQRankSum=-1.460;QD=6.47;ReadPosRankSum=-1.571;VQSLOD=2.4206;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:45:67.01:0,67,695	0/0:14,0:11:11.83:0,12,77	0/1:22,0:10:23.68:24,0,76	0/0:37,0:11:12.57:0,13,97	1/1:22,1:17:8.80:67,9,0	1/1:19,0:11:18.31:134,18,0	1/1:24,0:16:1.64:70,2,0	0/1:19,0:14:20.19:166,0,20	0/1:23,0:15:21.48:21,0,71	1/1:9,2:7:11.22:98,11,0	./.	0/0:27,0:26:42.25:0,42,369	0/0:23,0:19:38.88:0,39,460	./.	1/1:16,0:13:8.79:98,9,0	1/1:24,0:16:14.84:107,15,0	1/1:24,0:18:5.61:171,6,0	0/0:18,0:14:35.54:0,36,241	0/1:21,0:17:11.50:165,0,12	1/1:15,0:15:14.86:107,15,0	1/1:20,0:14:12:123,12,0	0/0:33,0:28:35.90:0,36,346	0/0:25,0:20:23.74:0,24,191	0/0:43,0:34:47.90:0,48,463	1/1:14,0:12:17.80:126,18,0	1/1:16,1:14:35.84:339,36,0	1/1:16,2:16:33.67:322,34,0	1/1:12,1:11:17.80:152,18,0
chr10	77752292	.	A	AT	6590.82	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-9.820;DP=639;FS=8.716;HRun=2;HaplotypeScore=64.4451;InbreedingCoeff=0.8752;MQ=80.01;MQ0=0;MQRankSum=-1.245;QD=35.25;ReadPosRankSum=-0.175;VQSLOD=4.8082;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,114,1365	0/0:7,0:7:12:0,12,132	0/0:25,0:25:62.89:0,63,740	0/1:19,0:19:31.25:31,0,473	0/0:20,0:20:60.15:0,60,714	1/1:0,19:19:51.13:710,51,0	1/1:2,20:22:48.16:691,48,0	1/1:1,26:27:78.22:1079,78,0	0/0:13,0:13:36.11:0,36,446	0/0:25,0:24:72.23:0,72,893	0/0:22,0:22:60.13:0,60,712	0/0:31,0:31:84.26:0,84,1041	0/0:15,0:15:36.10:0,36,433	0/0:23,0:23:51.15:0,51,619	1/1:5,22:26:75.19:1038,75,0	1/1:0,17:17:48.16:691,48,0	1/1:0,32:32:96.32:1382,96,0	0/0:15,0:15:39.12:0,39,475	0/0:23,0:23:66.15:0,66,777	0/0:31,0:31:90.25:0,90,1099	0/0:22,0:22:63.20:0,63,781	0/0:28,0:28:75.23:0,75,918	0/0:23,0:23:51.06:0,51,587	0/0:22,0:22:63.20:0,63,781	1/1:1,23:24:69.18:968,69,0	0/0:26,0:26:72.22:0,72,881	0/0:33,0:33:96.26:0,96,1172	0/0:3,0:3:3.01:0,3,37
chr10	77752652	.	T	TACACTCACAC	2595.17	PASS	AB=0.927;AC=21;AF=0.375;AN=56;BaseQRankSum=-1.405;DP=627;FS=34.990;HRun=0;HaplotypeScore=176.2708;InbreedingCoeff=0.5794;MQ=57.43;MQ0=16;MQRankSum=-0.736;QD=9.98;ReadPosRankSum=-3.172;VQSLOD=0.5173;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:66.27:0,66,594	1/1:5,0:5:6.01:79,6,0	0/0:32,0:9:12.21:0,12,143	0/0:41,0:13:29.14:0,29,303	0/1:20,0:20:16.02:16,0,255	1/1:14,0:14:23.98:254,24,0	1/1:31,0:31:64.39:616,64,0	1/1:21,0:21:53.02:466,53,0	0/0:23,0:23:52.79:0,53,528	0/1:21,0:21:8.61:9,0,304	0/0:17,0:19:26.98:0,27,273	0/0:13,0:13:36.41:0,36,462	0/0:24,0:25:53.79:0,54,575	0/0:17,0:24:36.43:0,36,309	1/1:21,0:21:32.23:371,32,0	1/1:4,1:23:3:129,3,0	1/1:25,0:25:14.70:402,15,0	0/0:13,0:16:35.11:0,35,583	0/1:20,0:21:6.57:7,0,317	0/0:22,0:22:8.34:0,8,268	0/0:44,0:43:25.45:0,25,450	0/0:14,0:14:29.95:0,30,245	0/0:11,0:10:23.96:0,24,197	0/0:21,0:34:44.31:0,44,395	1/1:20,0:20:30:320,30,0	0/1:23,0:23:88.52:89,0,207	0/0:17,0:17:39.20:0,39,317	0/1:8,0:14:38.28:38,0,118
chr10	77753613	.	GAA	G	1283.54	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.402;DP=712;FS=1.477;HRun=3;HaplotypeScore=101.2544;InbreedingCoeff=0.9995;MQ=87.22;MQ0=1;MQRankSum=-0.055;QD=38.90;ReadPosRankSum=2.821;VQSLOD=3.2831;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:52:99:0,156,2925	0/0:11,0:11:33.11:0,33,632	0/0:21,0:21:60.21:0,60,1137	0/0:27,0:27:63.19:0,63,1126	0/0:30,0:30:90.31:0,90,1723	0/0:20,0:20:60.16:0,60,1114	0/0:24,0:24:72.25:0,72,1392	0/0:28,0:28:84.29:0,84,1618	0/0:29,0:29:87.30:0,87,1660	0/0:23,0:23:69.24:0,69,1329	0/0:12,0:12:33.11:0,33,637	0/0:19,0:19:57.19:0,57,1074	0/0:24,0:24:72.25:0,72,1381	0/0:29,0:29:87.30:0,87,1672	0/0:26,0:26:78.27:0,78,1507	0/0:19,0:19:57.19:0,57,1071	0/0:40,0:40:99:0,120,2288	1/1:2,31:32:90.31:1378,90,0	0/0:23,0:23:69.22:0,69,1250	0/0:19,0:19:54.19:0,54,1043	0/0:40,0:40:99:0,117,2259	0/0:30,0:30:90.31:0,90,1711	0/0:18,0:18:54.19:0,54,1039	0/0:32,0:32:96.33:0,96,1849	0/0:18,0:18:54.19:0,54,1044	0/0:28,0:28:81.28:0,81,1559	0/0:19,0:19:57.20:0,57,1100	0/0:17,0:17:48.16:0,48,880
chr10	77754102	.	ATT	A	2181.50	PASS	AB=0.676;AC=32;AF=0.571;AN=56;BaseQRankSum=4.766;DP=477;FS=9.809;HRun=16;HaplotypeScore=81.5011;InbreedingCoeff=0.6977;MQ=69.16;MQ0=8;MQRankSum=-4.707;QD=7.47;ReadPosRankSum=3.658;VQSLOD=0.1420;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:34:72.70:0,73,611	0/0:7,0:7:14.30:0,14,110	0/0:22,0:15:17.60:0,18,128	0/0:22,0:16:13.22:0,13,85	0/1:11,12:26:6.77:285,0,7	1/1:8,0:16:32.89:144,33,0	1/1:8,0:18:30.52:130,31,0	1/1:13,0:18:18.86:80,19,0	0/0:6,0:7:17.43:0,17,146	1/1:8,11:20:11.60:183,12,0	1/1:5,5:11:17.82:142,18,0	0/0:15,0:15:29.94:0,30,296	0/0:10,0:15:22.96:0,23,204	1/1:4,5:8:14.89:125,15,0	1/1:12,0:17:32.10:136,32,0	1/1:3,0:11:17.29:95,17,0	1/1:11,0:18:6.96:67,7,0	0/1:11,1:17:12.93:13,0,127	0/1:10,6:20:4.75:141,0,5	1/1:4,10:17:23.53:229,24,0	1/1:4,3:6:5.85:50,6,0	0/0:19,0:20:41.77:0,42,403	0/0:17,0:18:35.42:0,35,419	0/0:19,0:22:52.50:0,53,528	1/1:6,0:14:24.58:105,25,0	1/1:10,7:18:28.14:216,28,0	1/1:12,9:21:10.70:188,11,0	0/1:4,3:7:9.03:63,0,9
chr10	77755487	.	TTTG	T	3938.97	PASS	AB=0.988;AC=34;AF=0.607;AN=56;BaseQRankSum=9.906;DP=545;FS=6.346;HRun=0;HaplotypeScore=131.3387;InbreedingCoeff=0.6083;MQ=66.17;MQ0=6;MQRankSum=-7.004;QD=11.65;ReadPosRankSum=-5.541;VQSLOD=1.6243;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:88.14:0,88,1789	0/0:6,0:6:17.95:0,18,255	0/1:27,0:12:27.47:27,0,109	0/0:44,0:20:9.90:0,10,168	1/1:21,2:23:53.21:486,53,0	0/1:11,0:11:11.01:13,0,11	1/1:17,0:17:8:124,8,0	1/1:13,0:12:0.37:46,0,0	0/0:23,0:23:66.13:0,66,1045	1/1:21,0:21:46.79:431,47,0	1/1:22,0:22:60.78:557,61,0	0/0:20,0:20:45.93:0,46,720	0/0:24,0:24:65.99:0,66,766	1/1:15,0:15:8.98:99,9,0	1/1:15,0:15:1.36:3,1,0	0/1:13,0:13:9.49:9,0,87	0/1:18,1:19:50.90:115,0,51	1/1:8,0:8:5.91:103,6,0	1/1:19,0:18:40.27:479,40,0	1/1:17,1:17:44.76:390,45,0	1/1:10,0:9:8.82:108,9,0	0/0:13,0:13:36.07:0,36,587	0/0:16,0:16:47.71:0,48,623	0/0:21,0:21:54.25:0,54,841	1/1:25,0:25:11.83:79,12,0	1/1:30,0:30:64.24:441,64,0	1/1:24,1:25:29.82:314,30,0	1/1:7,0:6:14.85:111,15,0
chr10	77755488	.	TTG	T	5481.31	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=11.023;DP=553;FS=4.379;HRun=0;HaplotypeScore=121.1249;InbreedingCoeff=0.7917;MQ=65.97;MQ0=7;MQRankSum=-8.413;QD=15.98;ReadPosRankSum=-4.417;VQSLOD=3.4208;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:88.01:0,88,1499	0/0:6,0:6:18.04:0,18,222	0/1:29,0:13:12.21:12,0,142	0/0:44,0:20:3.90:0,4,176	1/1:15,8:23:57.39:556,57,0	1/1:11,0:11:17.60:88,18,0	1/1:16,1:17:44.46:360,44,0	1/1:13,0:12:17.91:166,18,0	0/0:23,0:23:64.90:0,65,874	1/1:15,7:22:50.08:484,50,0	1/1:11,11:22:61.38:622,61,0	0/0:20,0:20:47.41:0,47,579	0/0:24,0:24:60.60:0,61,662	1/1:2,12:14:9.01:96,9,0	1/1:15,0:15:4.56:31,5,0	0/1:13,0:13:14.66:88,0,15	1/1:20,0:20:32.73:270,33,0	1/1:8,0:8:19.18:133,19,0	1/1:13,7:19:48.42:499,48,0	1/1:15,5:19:52.60:487,53,0	1/1:9,0:8:15.79:119,16,0	0/0:13,0:13:34.72:0,35,454	0/0:18,0:18:52.80:0,53,568	0/0:22,0:22:54.17:0,54,718	1/1:21,4:25:43.45:338,43,0	1/1:31,0:31:79.16:697,79,0	1/1:8,16:24:29.95:299,30,0	1/1:7,0:6:14.96:136,15,0
chr10	77755489	.	TG	T	5944.12	PASS	AB=0.963;AC=38;AF=0.679;AN=56;BaseQRankSum=10.445;DP=555;FS=8.144;HRun=1;HaplotypeScore=113.7454;InbreedingCoeff=0.8527;MQ=64.99;MQ0=7;MQRankSum=-8.020;QD=15.28;ReadPosRankSum=-4.497;VQSLOD=2.8466;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:85.46:0,85,1195	0/0:6,0:6:17.08:0,17,147	0/1:28,1:12:6.65:7,0,137	0/1:44,2:20:3.58:4,0,108	1/1:22,1:23:58.83:435,59,0	1/1:1,10:11:20.98:247,21,0	1/1:13,4:17:50.47:438,50,0	1/1:10,3:12:28.70:251,29,0	0/0:23,0:23:38.24:0,38,649	1/1:19,2:21:50.64:378,51,0	1/1:19,3:22:61.02:432,61,0	0/0:20,0:20:46.48:0,46,417	0/0:22,1:23:54.80:0,55,520	1/1:12,2:14:8.98:72,9,0	1/1:2,13:15:8.82:61,9,0	1/1:10,3:13:27.39:372,27,0	1/1:15,5:20:53.74:508,54,0	1/1:7,2:9:19.27:129,19,0	1/1:17,2:18:48.06:383,48,0	1/1:18,2:19:53.08:412,53,0	1/1:7,2:8:17.79:125,18,0	0/0:13,0:13:21.80:0,22,322	0/0:19,0:19:41.45:0,41,462	0/0:22,0:22:46.19:0,46,569	1/1:5,20:25:44.99:520,45,0	1/1:19,12:31:80.33:782,80,0	1/1:20,4:24:29.79:248,30,0	1/1:6,2:7:15.85:140,16,0
chr10	77755493	.	TTG	T	2705.06	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=12.728;DP=566;FS=2.160;HRun=0;HaplotypeScore=133.8999;InbreedingCoeff=0.7791;MQ=61.77;MQ0=9;MQRankSum=-8.616;QD=11.09;ReadPosRankSum=-4.366;VQSLOD=2.5924;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:99:0,111,1831	0/0:6,0:6:17.98:0,18,275	0/0:30,0:11:5.05:0,5,147	0/0:48,0:19:17.57:0,18,245	1/1:21,1:22:46.70:275,47,0	0/0:11,0:11:20.84:0,21,174	0/1:15,0:15:71.16:71,0,150	0/0:12,0:11:20.43:0,20,125	0/0:24,0:24:66.16:0,66,1029	1/1:22,1:22:40.32:261,40,0	1/1:20,2:22:52.59:363,53,0	0/0:19,0:19:47.19:0,47,764	0/0:24,0:24:67.07:0,67,966	1/1:12,1:13:8.72:58,9,0	0/0:16,0:16:8.30:0,8,72	0/0:13,0:13:12.71:0,13,150	0/1:22,0:22:42.84:43,0,146	1/1:13,0:13:30.33:196,30,0	1/1:20,1:20:46.79:320,47,0	1/1:21,1:21:39.73:340,40,0	1/1:7,0:7:8.96:80,9,0	0/0:12,0:12:36.09:0,36,598	0/0:17,0:17:48.11:0,48,759	0/0:23,0:23:57.63:0,58,936	0/0:25,0:25:11.35:0,11,208	1/1:29,0:28:52.97:555,53,0	1/1:22,3:25:32.37:238,32,0	1/1:9,0:8:4.52:121,5,0
chr10	77755494	.	TG	T	2874.80	PASS	AB=0.962;AC=26;AF=0.464;AN=56;BaseQRankSum=12.579;DP=577;FS=0.000;HRun=1;HaplotypeScore=127.9374;InbreedingCoeff=0.6423;MQ=62.26;MQ0=11;MQRankSum=-8.401;QD=9.91;ReadPosRankSum=-3.598;VQSLOD=0.0386;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:99:0,111,1474	0/0:6,0:6:17.97:0,18,210	0/0:29,1:12:3.57:0,4,147	0/0:49,0:19:27.27:0,27,207	1/1:22,0:22:51.28:310,51,0	0/0:11,0:11:14.54:0,15,64	0/1:14,2:16:74.64:75,0,108	0/0:12,0:11:4.66:0,5,103	0/0:24,0:24:64.45:0,64,815	1/1:24,0:22:48.09:257,48,0	1/1:22,1:22:48.13:325,48,0	0/0:20,0:20:44.99:0,45,580	0/0:23,1:24:65.28:0,65,762	1/1:12,1:13:8.81:56,9,0	0/0:17,0:17:8.21:0,8,61	0/1:13,0:13:27.73:167,0,28	0/1:22,1:23:58.54:154,0,59	1/1:12,0:13:30.89:207,31,0	1/1:22,0:21:48.69:324,49,0	1/1:22,0:21:39.77:334,40,0	1/1:8,1:7:8.47:66,8,0	0/0:13,0:13:38.59:0,39,491	0/0:17,0:17:45.52:0,46,601	0/0:23,0:23:56.41:0,56,754	0/1:25,0:25:29.44:29,0,95	1/1:27,3:29:61.29:441,61,0	1/1:24,1:25:34.02:213,34,0	1/1:8,1:8:19.45:128,19,0
chr10	77755495	.	GT	G	1332.68	PASS	AB=0.883;AC=19;AF=0.339;AN=56;BaseQRankSum=11.626;DP=593;FS=25.437;HRun=4;HaplotypeScore=138.0832;InbreedingCoeff=0.4568;MQ=61.70;MQ0=12;MQRankSum=-8.199;QD=4.99;ReadPosRankSum=-0.037;VQSLOD=-0.6894;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:99:0,102,1359	0/0:6,0:6:15.05:0,15,204	0/1:32,1:13:2.79:3,0,85	0/0:52,0:21:22.14:0,22,172	1/1:14,7:23:26.36:193,26,0	0/0:12,0:12:20.97:0,21,216	0/0:16,0:16:15.23:0,15,305	0/0:12,0:11:20.95:0,21,225	0/0:25,0:25:63.12:0,63,794	0/1:17,8:23:24.41:229,0,24	1/1:14,6:22:38.77:249,39,0	0/0:20,0:20:48.02:0,48,630	0/0:24,0:24:54.35:0,54,763	1/1:13,0:13:6.81:23,7,0	0/0:18,0:18:12.03:0,12,134	0/1:15,0:15:40.56:41,0,133	0/0:24,0:24:6.22:0,6,244	0/1:13,0:13:5.64:6,0,29	0/1:16,7:21:12.82:248,0,13	0/1:17,3:21:0.74:139,0,1	1/1:9,0:7:3.96:14,4,0	0/0:13,0:13:38.86:0,39,504	0/0:17,0:17:47.89:0,48,615	0/0:23,0:23:57.57:0,58,737	0/0:24,0:24:15.98:0,16,345	0/1:29,4:32:3.84:248,0,4	1/1:22,2:25:5.68:81,6,0	1/1:9,0:8:8.84:38,9,0
chr10	77755499	.	TG	T	2374.45	PASS	AB=0.977;AC=27;AF=0.482;AN=56;BaseQRankSum=12.152;DP=590;FS=1.599;HRun=1;HaplotypeScore=129.1501;InbreedingCoeff=0.6113;MQ=63.11;MQ0=13;MQRankSum=-7.394;QD=7.66;ReadPosRankSum=-3.669;VQSLOD=-0.5316;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:94.51:0,95,1252	0/0:6,0:6:17.80:0,18,177	0/0:34,1:15:4.32:0,4,69	0/0:53,0:20:9.98:0,10,183	1/1:23,0:23:54.33:299,54,0	0/0:13,0:13:26.97:0,27,319	0/1:16,0:16:33.90:34,0,297	0/1:13,0:12:25.72:26,0,192	0/0:23,0:23:56.19:0,56,729	1/1:25,0:23:28.27:242,28,0	1/1:23,0:22:57.69:327,58,0	0/0:20,0:20:46.36:0,46,621	0/0:20,1:21:42.66:0,43,627	1/1:11,1:12:8.88:60,9,0	0/0:18,0:18:17.88:0,18,180	0/1:16,0:16:87.84:88,0,161	0/1:23,2:25:56.36:56,0,239	1/1:11,0:12:29.01:196,29,0	1/1:23,0:21:28.84:233,29,0	1/1:20,0:19:50.76:298,51,0	1/1:10,1:9:14.33:87,14,0	0/0:15,0:15:33.76:0,34,518	0/0:17,0:17:41.02:0,41,574	0/0:22,0:22:57.12:0,57,687	0/1:22,1:23:7.76:8,0,394	1/1:33,0:31:51.11:351,51,0	1/1:25,1:26:36.07:201,36,0	1/1:9,0:8:14.86:81,15,0
chr10	77755500	.	GT	G	1568.16	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=9.883;DP=599;FS=15.220;HRun=4;HaplotypeScore=136.5057;InbreedingCoeff=0.8005;MQ=64.22;MQ0=14;MQRankSum=-4.622;QD=7.54;ReadPosRankSum=-3.263;VQSLOD=-0.6246;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:98.86:0,99,1270	0/0:6,0:6:18.05:0,18,231	0/0:37,0:16:4.32:0,4,83	0/0:55,0:21:5.73:0,6,146	1/1:20,3:24:41.63:318,42,0	0/0:15,0:15:29.99:0,30,336	0/0:15,0:16:8.97:0,9,320	0/0:13,0:12:20.49:0,20,225	0/0:21,0:22:49.91:0,50,657	1/1:23,3:24:7.79:300,8,0	1/1:19,4:23:31.15:225,31,0	0/0:20,0:20:46.94:0,47,576	0/0:20,0:21:56.43:0,56,584	1/1:12,0:12:5.34:18,5,0	0/0:17,0:18:14.98:0,15,159	0/0:16,0:16:18.58:0,19,239	0/0:25,0:25:22.53:0,23,365	0/0:12,0:12:6.25:0,6,52	0/1:23,0:21:9.31:111,0,9	1/1:20,0:19:6.60:155,7,0	1/1:7,4:9:7.14:46,7,0	0/0:15,0:15:44.75:0,45,530	0/0:17,0:17:43.59:0,44,547	0/0:20,0:20:51.31:0,51,662	0/0:23,0:23:25.98:0,26,401	1/1:25,8:31:32.69:331,33,0	1/1:24,1:26:23.96:190,24,0	1/1:8,1:8:13.30:74,13,0
chr10	77755503	.	TTG	T	2254.17	PASS	AB=0.998;AC=28;AF=0.500;AN=56;BaseQRankSum=10.267;DP=616;FS=12.519;HRun=0;HaplotypeScore=140.1092;InbreedingCoeff=0.4708;MQ=63.54;MQ0=14;MQRankSum=-6.721;QD=5.43;ReadPosRankSum=-4.888;VQSLOD=0.6691;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:72.30:0,72,1089	0/0:6,0:6:17.78:0,18,204	0/1:39,0:15:26.89:34,0,27	0/1:57,1:21:0.09:0,0,77	1/1:25,0:25:23.74:223,24,0	0/0:15,0:15:25.46:0,25,275	0/1:16,0:16:27.42:27,0,206	0/1:16,0:15:30.85:31,0,135	0/0:22,0:22:45.53:0,46,500	1/1:26,1:25:27.36:253,27,0	1/1:23,1:24:20.33:243,20,0	0/0:21,0:21:22.84:0,23,418	0/0:21,0:21:13.59:0,14,282	1/1:11,1:12:8.79:56,9,0	0/1:18,0:18:7.07:7,0,64	0/1:16,0:16:13.78:14,0,135	0/1:25,0:25:11.53:12,0,212	1/1:12,0:12:28.69:191,29,0	0/1:23,0:21:1.30:184,0,1	1/1:20,0:19:27.10:220,27,0	1/1:11,0:9:3.96:36,4,0	0/0:16,0:16:25.20:0,25,404	0/0:17,0:17:44.40:0,44,448	0/0:21,0:21:50.79:0,51,582	0/0:23,0:23:32.64:0,33,273	1/1:26,7:31:48.95:564,49,0	1/1:26,0:26:31.60:231,32,0	1/1:10,1:10:9.25:128,9,0
chr10	77755504	.	TG	T	2636.67	PASS	AB=0.993;AC=29;AF=0.518;AN=56;BaseQRankSum=10.825;DP=613;FS=0.742;HRun=1;HaplotypeScore=130.9327;InbreedingCoeff=0.4754;MQ=63.85;MQ0=14;MQRankSum=-7.126;QD=7.01;ReadPosRankSum=-3.324;VQSLOD=-0.6112;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:74.38:0,74,824	0/0:6,0:6:14.11:0,14,149	0/1:37,2:16:27.12:27,0,32	0/0:56,1:20:6.34:0,6,92	1/1:25,0:25:43.32:304,43,0	0/0:15,0:15:29.01:0,29,254	0/1:16,0:16:51.59:52,0,156	0/1:17,0:16:57.77:58,0,117	0/0:23,0:23:12.80:0,13,309	1/1:25,2:25:49.74:325,50,0	1/1:25,0:24:31.96:291,32,0	0/0:21,0:21:25.73:0,26,298	0/0:21,0:21:11.28:0,11,174	1/1:12,0:12:8.76:53,9,0	0/1:18,0:18:7.63:8,0,56	0/1:17,0:17:43.55:44,0,71	0/1:25,0:25:64.58:65,0,162	1/1:11,0:11:31.16:218,31,0	1/1:20,0:19:13.22:276,13,0	1/1:18,0:18:27.32:270,27,0	1/1:9,1:9:12.74:60,13,0	0/0:16,0:16:26.95:0,27,305	0/0:17,0:17:39.82:0,40,354	0/0:21,0:21:40.06:0,40,458	0/1:22,0:22:8.83:9,0,189	1/1:33,0:31:50.86:426,51,0	1/1:27,1:28:16.57:238,17,0	1/1:11,0:10:18.61:120,19,0
chr10	77755818	.	G	GGT	90.34	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.587;DP=573;FS=9.074;HRun=0;HaplotypeScore=86.5788;InbreedingCoeff=0.9281;MQ=78.57;MQ0=0;MQRankSum=-0.629;QD=22.58;ReadPosRankSum=0.665;VQSLOD=3.8454;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,1994	1/1:0,4:4:8.83:173,9,0	0/0:18,0:18:51.17:0,51,776	0/0:19,0:20:48.99:0,49,724	0/0:36,0:36:96.31:0,96,1435	0/0:24,0:24:72.24:0,72,1101	0/0:24,0:24:63.21:0,63,951	0/0:22,0:22:57.17:0,57,832	0/0:13,0:13:39.13:0,39,597	0/0:20,0:20:60.20:0,60,918	0/0:20,0:20:54.17:0,54,805	0/0:21,0:21:63.21:0,63,956	0/0:17,0:17:45.15:0,45,689	0/0:17,0:17:48.16:0,48,734	0/0:22,0:22:63.21:0,63,960	0/0:12,0:12:36.12:0,36,551	0/0:22,0:22:60.20:0,60,909	0/0:28,0:28:78.26:0,78,1179	0/0:12,0:12:36.12:0,36,545	0/0:23,0:23:66.18:0,66,984	0/0:13,0:13:39.13:0,39,569	0/0:18,0:18:51.16:0,51,753	0/0:18,0:18:45.15:0,45,688	0/0:29,0:29:72.24:0,72,1102	0/0:24,0:24:69.23:0,69,1056	0/0:19,0:19:57.19:0,57,865	0/0:25,0:25:69.22:0,69,1034	0/0:6,0:6:18.06:0,18,276
chr10	77756494	.	C	CT	1344.03	PASS	AB=0.750;AC=43;AF=0.827;AN=52;BaseQRankSum=-1.546;DP=201;FS=34.505;HRun=10;HaplotypeScore=65.5396;InbreedingCoeff=0.4366;MQ=71.83;MQ0=8;MQRankSum=-1.869;QD=10.75;ReadPosRankSum=0.365;VQSLOD=0.4111;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:6:11.78:0,12,34	./.	0/0:28,0:13:25.83:0,26,151	0/0:28,0:10:9.34:0,9,65	1/1:2,1:3:5.98:53,6,0	1/1:2,0:2:5.97:46,6,0	1/1:5,0:3:6.01:56,6,0	1/1:6,1:6:11.84:87,12,0	1/1:6,0:6:8.28:32,8,0	1/1:4,0:4:1.60:10,2,0	1/1:3,0:3:5.60:26,6,0	1/1:8,0:6:2.64:37,3,0	1/1:6,0:5:5.94:42,6,0	1/1:5,0:5:12.89:111,13,0	1/1:8,0:7:11.32:92,11,0	1/1:5,0:5:8.20:56,8,0	1/1:8,0:8:11.66:81,12,0	0/0:4,0:4:3.59:0,4,10	1/1:9,3:12:14.05:169,14,0	1/1:0,1:1:3.01:32,3,0	0/1:6,3:9:9.17:53,0,9	1/1:3,0:3:2.99:23,3,0	1/1:2,0:2:2.68:11,3,0	./.	1/1:5,0:5:5.54:28,6,0	1/1:3,4:7:17.96:159,18,0	1/1:4,5:9:19.01:189,19,0	1/1:6,1:7:0.51:93,1,0
chr10	77756502	.	T	TC	1393.09	PASS	AB=1.000;AC=41;AF=0.759;AN=54;BaseQRankSum=1.582;DP=185;FS=30.365;HRun=0;HaplotypeScore=67.2523;InbreedingCoeff=0.3799;MQ=73.68;MQ0=7;MQRankSum=-3.596;QD=12.01;ReadPosRankSum=1.420;VQSLOD=1.9023;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:7:20.46:0,20,143	./.	0/0:30,0:13:20.23:0,20,226	0/0:24,0:9:16.40:0,16,153	1/1:2,0:2:2.40:12,2,0	1/1:0,2:2:6.01:67,6,0	1/1:0,4:3:6.02:78,6,0	0/1:6,0:4:1.50:2,0,17	1/1:2,0:5:14.68:121,15,0	0/1:0,0:4:6.66:65,0,7	1/1:0,0:3:6.01:62,6,0	1/1:2,2:5:8.99:107,9,0	1/1:1,1:2:3.48:42,3,0	1/1:0,4:5:14.98:176,15,0	1/1:1,6:7:17.71:194,18,0	1/1:2,2:5:14.69:134,15,0	1/1:0,2:8:12.03:139,12,0	0/0:3,0:3:8.64:0,9,57	0/1:13,0:12:19.27:19,0,56	1/1:1,0:1:2.60:10,3,0	0/1:6,0:6:5.74:6,0,47	1/1:0,1:1:3.01:41,3,0	1/1:0,0:1:3.01:30,3,0	1/1:2,3:5:6.01:78,6,0	1/1:0,1:3:6.01:66,6,0	1/1:7,0:7:1.47:15,1,0	1/1:10,0:10:20.34:89,20,0	0/1:6,0:6:1.56:2,0,33
chr10	77756503	.	TTCC	T	1179.33	PASS	AB=0.915;AC=34;AF=0.630;AN=54;BaseQRankSum=-5.552;DP=182;FS=12.053;HRun=0;HaplotypeScore=71.7362;InbreedingCoeff=-0.1284;MQ=74.09;MQ0=7;MQRankSum=0.577;QD=9.51;ReadPosRankSum=-0.960;VQSLOD=1.6211;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:1,0:7:6.76:8,0,7	./.	0/0:31,0:13:30.03:0,30,335	0/0:23,0:9:17.36:0,17,203	0/1:1,1:2:2.02:15,0,2	0/1:2,0:2:7.20:14,0,7	0/0:4,0:2:5.72:0,6,32	1/1:2,4:4:11.83:147,12,0	0/1:5,0:5:35.10:65,0,35	1/1:4,0:4:5.71:54,6,0	1/1:3,0:3:6.01:62,6,0	0/1:7,0:5:0.01:64,0,0	0/1:3,0:2:7.87:28,0,8	0/1:5,0:5:8.64:64,0,9	0/1:7,0:6:29.54:34,0,30	0/1:5,0:5:5.42:36,0,5	0/1:8,0:8:3.71:59,0,4	1/1:1,0:3:4.73:15,5,0	0/1:12,1:12:14.99:145,0,15	1/1:1,0:1:3.01:30,3,0	0/1:6,0:6:45.46:70,0,45	1/1:1,0:1:2.98:21,3,0	1/1:1,0:1:3.01:30,3,0	1/1:4,0:4:0.47:1,0,0	1/1:3,0:3:1.81:28,2,0	0/1:5,2:7:11.64:128,0,12	0/1:9,1:10:27.35:29,0,27	1/1:3,3:6:12.51:179,13,0
chr10	77756517	.	TC	T	423.62	PASS	AB=0.860;AC=22;AF=0.500;AN=44;BaseQRankSum=-0.304;DP=140;FS=2.066;HRun=2;HaplotypeScore=68.6128;InbreedingCoeff=0.1632;MQ=65.94;MQ0=6;MQRankSum=-2.350;QD=4.51;ReadPosRankSum=-0.266;VQSLOD=0.4450;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,10:7:18.01:205,18,0	./.	0/0:23,1:8:5.06:0,5,150	0/1:13,0:6:1.34:1,0,80	1/1:1,0:1:2.04:6,2,0	0/0:2,0:2:5.80:0,6,32	0/0:5,0:3:8.65:0,9,47	1/1:2,0:3:2.98:21,3,0	0/0:2,0:2:5.83:0,6,33	0/0:2,0:2:5.21:0,5,22	./.	0/0:5,0:3:8.72:0,9,49	0/1:2,0:2:5.49:5,0,10	0/1:4,0:5:19.32:19,0,21	0/1:5,2:6:35.32:59,0,35	0/1:5,0:5:19.02:26,0,19	0/1:8,0:8:3.40:3,0,49	0/1:1,2:3:7.20:15,0,7	1/1:5,0:7:16.19:67,16,0	./.	1/1:5,0:5:5.03:28,5,0	./.	./.	0/1:5,0:5:7.97:29,0,8	0/0:2,0:2:2.68:0,3,11	1/1:3,0:4:6.96:19,7,0	1/1:7,0:9:20.22:63,20,0	./.
chr10	77756518	.	C	CTT	807.71	PASS	AB=1.000;AC=19;AF=0.432;AN=44;BaseQRankSum=-0.486;DP=129;FS=2.372;HRun=3;HaplotypeScore=68.7627;InbreedingCoeff=0.2844;MQ=64.44;MQ0=6;MQRankSum=-1.708;QD=12.82;ReadPosRankSum=-0.057;VQSLOD=0.3929;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:6:12.45:0,12,46	./.	0/0:22,0:8:13.71:0,14,190	0/1:12,0:5:8.26:8,0,111	1/1:0,1:1:3.01:50,3,0	0/0:2,0:2:4.19:0,4,21	0/0:5,0:3:7.12:0,7,40	1/1:3,0:2:2.98:21,3,0	0/0:2,0:2:5.89:0,6,37	0/0:2,0:2:5.16:0,5,25	./.	0/0:5,0:3:8.72:0,9,49	0/1:3,0:2:7.05:7,0,10	0/1:6,0:5:20.16:30,0,20	0/1:7,0:6:14.26:14,0,38	0/1:5,0:5:16.24:16,0,23	0/0:8,0:8:13.54:0,14,76	0/0:3,0:3:1.50:0,2,15	1/1:6,2:6:15.52:228,16,0	./.	1/1:3,2:5:8.95:92,9,0	./.	./.	0/0:5,0:5:3.91:0,4,22	1/1:2,0:2:2.22:7,2,0	1/1:1,1:2:6.02:101,6,0	1/1:2,5:9:26.98:382,27,0	./.
chr10	77756539	.	TG	T	654.47	PASS	AC=38;AF=1.000;AN=38;DP=81;FS=0.000;HRun=2;HaplotypeScore=62.5125;InbreedingCoeff=0.0204;MQ=25.41;MQ0=3;QD=9.09;VQSLOD=1.1792;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:6:13.99:85,14,0	./.	./.	./.	1/1:0,1:1:2.60:10,3,0	1/1:0,2:2:5.72:32,6,0	1/1:2,3:3:2.74:12,3,0	./.	1/1:0,2:2:5.54:24,6,0	1/1:0,2:1:2.98:22,3,0	./.	1/1:0,4:3:8.23:35,8,0	1/1:0,3:3:8.29:36,8,0	1/1:1,3:3:8.23:35,8,0	1/1:1,6:6:13.72:58,14,0	1/1:0,3:3:8.38:38,8,0	1/1:0,2:2:5.81:51,6,0	1/1:1,1:2:2.92:17,3,0	1/1:1,6:5:14.68:106,15,0	./.	1/1:1,1:2:2.74:12,3,0	./.	./.	1/1:1,3:4:2.50:9,2,0	1/1:0,1:1:2.74:12,3,0	1/1:0,1:1:2.90:16,3,0	1/1:0,9:9:25.30:120,25,0	./.
chr10	77756543	.	G	GT	732.05	PASS	AC=38;AF=1.000;AN=38;DP=71;FS=0.000;HRun=2;HaplotypeScore=59.0246;InbreedingCoeff=-0.0580;MQ=25.54;MQ0=2;QD=11.44;VQSLOD=1.7811;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:6:11.61:64,12,0	./.	./.	./.	1/1:0,1:1:2.84:14,3,0	1/1:0,2:2:5.81:32,6,0	1/1:0,3:1:2.90:16,3,0	./.	1/1:0,2:2:5.83:33,6,0	1/1:0,2:1:3:26,3,0	./.	1/1:0,4:3:8.71:48,9,0	1/1:0,3:3:8.73:49,9,0	1/1:0,3:3:8.71:48,9,0	1/1:0,6:5:14.51:80,15,0	1/1:0,3:3:8.77:51,9,0	1/1:1,1:2:2.92:17,3,0	1/1:0,1:1:2.98:21,3,0	1/1:1,5:5:11.89:84,12,0	./.	1/1:0,1:1:2.90:16,3,0	./.	./.	1/1:1,2:3:2.80:13,3,0	1/1:0,1:1:2.90:16,3,0	1/1:0,1:1:2.97:20,3,0	1/1:0,9:9:26.37:159,26,0	./.
chr10	77756554	.	C	CA	1877.66	PASS	AC=36;AF=1.000;AN=36;DP=63;FS=0.000;HRun=1;HaplotypeScore=50.2128;InbreedingCoeff=-0.1148;MQ=25.59;MQ0=1;QD=33.53;VQSLOD=3.1653;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:6:12.04:179,12,0	./.	./.	./.	1/1:0,1:1:3.01:45,3,0	1/1:0,1:1:3.01:45,3,0	./.	./.	1/1:0,2:2:6.02:90,6,0	1/1:0,2:1:3.01:45,3,0	./.	1/1:0,4:3:9.03:135,9,0	1/1:0,3:3:9.03:135,9,0	1/1:0,3:3:9.03:135,9,0	1/1:0,6:5:15.05:224,15,0	1/1:0,3:3:9.03:135,9,0	1/1:0,1:1:3.01:45,3,0	1/1:0,1:1:3.01:45,3,0	1/1:0,4:3:9.03:135,9,0	./.	1/1:0,1:1:3.01:33,3,0	./.	./.	1/1:1,1:2:6.02:78,6,0	1/1:0,1:1:3.01:45,3,0	1/1:0,1:1:3.01:45,3,0	1/1:1,8:9:24.08:359,24,0	./.
chr10	77756686	.	G	GA	3108.57	PASS	AB=0.639;AC=46;AF=0.821;AN=56;BaseQRankSum=-0.930;DP=419;FS=9.602;HRun=12;HaplotypeScore=62.3146;InbreedingCoeff=0.4789;MQ=53.89;MQ0=1;MQRankSum=-2.007;QD=8.31;ReadPosRankSum=1.587;VQSLOD=1.7537;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:31.18:0,31,331	1/1:1,7:9:14.86:131,15,0	0/0:7,0:6:16.15:0,16,111	0/0:7,0:6:14.02:0,14,94	1/1:5,14:19:27.51:264,28,0	0/1:11,0:15:0.02:70,0,0	1/1:6,3:20:17.68:101,18,0	1/1:6,2:20:32.04:203,32,0	1/1:4,0:8:8.52:43,9,0	1/1:6,16:23:38.18:383,38,0	0/1:5,12:17:0.88:149,0,1	1/1:9,0:11:8.52:43,9,0	1/1:3,0:9:5.80:34,6,0	0/1:7,8:15:9.88:76,0,10	1/1:6,0:17:19.89:99,20,0	1/1:2,0:16:12.04:134,12,0	1/1:1,1:27:51.13:256,51,0	1/1:3,1:15:17.47:85,17,0	1/1:7,6:16:10.13:133,10,0	1/1:5,8:14:12.54:143,13,0	0/1:3,12:15:15.50:179,0,16	1/1:7,0:12:0.94:2,1,0	1/1:2,1:9:5.68:28,6,0	1/1:3,0:12:11.87:68,12,0	1/1:1,0:13:22.73:114,23,0	1/1:3,9:15:6.94:223,7,0	1/1:3,13:17:23.85:211,24,0	1/1:1,5:6:9.01:88,9,0
chr10	77759618	.	TAC	T	3482.06	PASS	AB=0.964;AC=20;AF=0.357;AN=56;BaseQRankSum=0.170;DP=695;FS=0.900;HRun=0;HaplotypeScore=172.0046;InbreedingCoeff=0.4841;MQ=61.29;MQ0=12;MQRankSum=2.181;QD=10.78;ReadPosRankSum=4.507;VQSLOD=3.3841;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,2:51:37.71:0,38,1504	0/0:2,0:4:2.59:0,3,21	0/0:44,1:25:29.91:0,30,382	0/0:50,0:23:25.63:0,26,343	0/0:15,1:16:12.03:0,12,166	0/1:23,1:25:14.90:15,0,264	0/1:23,1:24:5.85:6,0,393	0/0:34,0:31:15.19:0,15,702	1/1:7,17:24:45.14:539,45,0	0/0:25,1:25:6.64:0,7,534	0/0:17,0:17:15.05:0,15,234	1/1:1,25:27:71.88:819,72,0	1/1:11,15:25:38.19:452,38,0	0/1:27,0:27:8.87:9,0,347	0/1:21,1:22:17.90:18,0,218	0/0:26,0:25:39.12:0,39,588	0/0:21,0:19:39.02:0,39,555	1/1:4,10:15:26.50:276,27,0	0/1:12,1:13:29.18:29,0,200	0/0:15,1:16:8.96:0,9,88	0/1:45,1:44:44.51:45,0,303	1/1:4,21:24:30.08:348,30,0	1/1:5,13:18:33.10:396,33,0	1/1:9,20:30:47.81:531,48,0	0/0:20,0:20:27.07:0,27,419	0/0:20,0:18:42.14:0,42,624	0/0:20,0:19:33.09:0,33,490	0/0:2,0:2:3.01:0,3,48
chr10	77759646	.	GACAT	G	2747.73	PASS	AB=0.889;AC=30;AF=0.577;AN=52;BaseQRankSum=0.746;DP=701;FS=11.773;HRun=0;HaplotypeScore=191.3290;InbreedingCoeff=0.5949;MQ=38.54;MQ0=86;MQRankSum=-1.795;QD=7.63;ReadPosRankSum=-3.308;VQSLOD=1.5531;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:46:99:0,123,2826	1/1:5,2:4:3.47:26,3,0	0/0:44,0:6:11.12:0,11,218	0/0:50,0:5:11.91:0,12,225	1/1:11,3:11:6.01:73,6,0	1/1:24,1:22:9.02:103,9,0	1/1:13,4:17:20.93:241,21,0	1/1:18,2:12:15.01:211,15,0	0/0:26,0:26:44.94:0,45,1080	0/1:14,19:25:23.94:389,0,24	1/1:13,2:12:8.51:89,9,0	0/0:38,0:36:68.65:0,69,1647	0/0:30,0:26:48.03:0,48,997	1/1:22,1:23:12.10:170,12,0	1/1:17,3:19:11.86:115,12,0	1/1:29,1:25:27:336,27,0	1/1:19,1:17:26.64:265,27,0	0/1:17,0:16:8.62:9,0,521	1/1:12,0:7:10.79:101,11,0	./.	0/1:44,2:30:42.65:157,0,43	0/0:27,0:21:33.58:0,34,798	0/0:28,0:22:29.88:0,30,645	0/0:36,0:32:48.48:0,48,1142	1/1:17,2:16:14.70:130,15,0	0/1:25,1:18:38.01:390,0,38	1/1:16,0:12:6.60:137,7,0	./.
chr10	77759666	.	CACACAGACACACACACAG	C	2719.90	PASS	AB=0.990;AC=29;AF=0.604;AN=48;BaseQRankSum=-0.946;DP=715;FS=12.658;HRun=0;HaplotypeScore=276.3832;InbreedingCoeff=-0.0853;MQ=35.50;MQ0=98;MQRankSum=-0.224;QD=5.42;ReadPosRankSum=1.693;VQSLOD=0.8736;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:44:49.96:0,50,1643	0/1:8,0:6:26.68:30,0,27	./.	./.	1/1:17,0:12:0.58:1,1,0	0/1:32,0:29:5.16:5,0,58	0/1:29,0:28:10.87:11,0,19	0/1:26,0:18:3.57:4,0,88	0/1:27,4:29:20.26:351,0,20	0/1:31,0:21:57.01:57,0,182	./.	1/1:32,0:30:31.22:502,31,0	1/1:26,1:23:20:223,20,0	0/1:29,0:29:18.04:18,0,45	0/1:26,0:25:8.05:27,0,8	1/1:33,0:28:1.22:25,1,0	0/0:24,0:20:3.54:0,4,53	0/1:17,0:16:86.18:165,0,86	0/1:11,0:8:7.47:42,0,7	0/0:18,0:14:3.01:0,3,42	0/0:49,0:32:2.46:0,2,72	1/1:29,0:22:18.03:264,18,0	1/1:23,0:17:7:112,7,0	1/1:40,0:35:41.23:816,41,0	1/1:17,0:13:2.96:19,3,0	0/1:26,0:15:80.07:80,0,133	1/1:18,0:14:1:113,1,0	./.
chr10	77759682	.	CAG	C	3107.65	PASS	AB=0.879;AC=39;AF=0.780;AN=50;BaseQRankSum=2.439;DP=665;FS=0.594;HRun=0;HaplotypeScore=172.0746;InbreedingCoeff=0.0257;MQ=36.09;MQ0=80;MQRankSum=0.926;QD=5.68;ReadPosRankSum=-2.702;VQSLOD=2.9820;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:39:41.93:0,42,1189	1/1:7,2:7:11.20:105,11,0	./.	./.	1/1:16,2:12:2.92:17,3,0	0/1:13,16:26:25.84:68,0,26	1/1:24,5:27:6.44:168,6,0	0/1:33,6:27:99:284,0,145	1/1:28,0:26:34.38:231,34,0	0/1:25,4:20:15.92:202,0,16	./.	1/1:30,1:27:40.74:286,41,0	1/1:25,1:22:32.18:214,32,0	1/1:23,2:25:5.86:129,6,0	1/1:23,5:27:26.62:220,27,0	1/1:26,1:22:6:58,6,0	0/1:22,2:20:25.68:83,0,26	0/1:17,0:17:36.22:123,0,36	0/1:13,2:13:22.57:107,0,23	1/1:14,4:14:2.88:17,3,0	0/0:45,3:33:2.84:0,3,56	1/1:30,0:23:22.84:188,23,0	1/1:23,1:19:10.48:114,10,0	1/1:38,1:34:43.60:333,44,0	1/1:18,1:15:9:92,9,0	0/1:22,1:13:76.15:108,0,76	1/1:18,0:15:11.92:81,12,0	1/1:2,0:2:5.02:28,5,0
chr10	77759684	.	G	GAC	1703.67	PASS	AB=0.992;AC=33;AF=0.660;AN=50;BaseQRankSum=2.370;DP=666;FS=2.262;HRun=0;HaplotypeScore=181.9965;InbreedingCoeff=-0.0193;MQ=36.42;MQ0=80;MQRankSum=-0.544;QD=3.33;ReadPosRankSum=-2.884;VQSLOD=2.6664;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:38:74.54:0,75,913	1/1:9,1:8:8.86:87,9,0	./.	./.	1/1:18,0:12:2.50:10,2,0	0/1:28,1:26:14.17:58,0,14	0/1:27,1:26:11.07:203,0,11	0/1:40,0:27:99:245,0,245	0/1:27,0:27:3.66:27,0,4	0/1:29,0:20:42.98:77,0,43	./.	1/1:32,0:28:16.49:123,16,0	1/1:24,0:21:7.55:69,8,0	0/0:25,0:25:0.39:0,0,28	1/1:27,1:27:25.88:273,26,0	1/1:21,4:20:6.49:101,6,0	1/1:14,11:21:11.10:87,11,0	0/1:18,0:18:16.81:17,0,53	0/1:19,0:17:31.20:103,0,31	0/0:18,0:14:2.22:0,2,7	0/0:48,0:33:3.16:0,3,39	1/1:30,0:23:8.55:53,9,0	0/1:24,0:19:9.13:18,0,9	1/1:40,0:35:6.93:68,7,0	1/1:18,1:15:5.42:76,5,0	0/1:24,0:14:56.74:70,0,57	1/1:17,0:14:4.02:60,4,0	1/1:2,0:2:5.02:28,5,0
chr10	77759686	.	CACAG	C	1882.21	PASS	AB=0.984;AC=28;AF=0.560;AN=50;BaseQRankSum=2.418;DP=675;FS=5.725;HRun=0;HaplotypeScore=186.2166;InbreedingCoeff=-0.1885;MQ=36.62;MQ0=79;MQRankSum=0.351;QD=3.71;ReadPosRankSum=-0.449;VQSLOD=2.3500;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:40:36.40:0,36,929	0/1:10,0:8:0.84:1,0,4	./.	./.	1/1:18,0:12:2.62:26,3,0	0/1:29,0:26:20.53:21,0,28	0/0:29,0:27:14.83:0,15,151	0/1:41,0:28:52.28:52,0,159	1/1:29,0:27:14.17:154,14,0	0/1:29,0:20:18.28:105,0,18	./.	0/1:33,0:29:23.96:249,0,24	0/1:25,1:22:26.91:116,0,27	0/1:24,0:24:2.40:42,0,2	0/1:28,0:27:11.45:11,0,75	0/0:25,0:20:5.27:0,5,21	0/1:25,0:21:12.93:13,0,50	0/1:18,0:18:40.14:103,0,40	0/1:20,1:19:32.23:125,0,32	1/1:20,0:15:0.89:2,1,0	0/0:50,1:36:5.70:0,6,34	1/1:31,0:24:8.70:160,9,0	0/1:24,1:20:20.62:160,0,21	0/1:37,1:33:9.35:228,0,9	1/1:18,0:16:1.59:54,2,0	0/1:22,2:14:45.74:176,0,46	1/1:17,0:15:12.73:149,13,0	1/1:2,0:2:6.02:84,6,0
chr10	77759688	.	CAG	C	1936.60	PASS	AB=0.981;AC=24;AF=0.480;AN=50;BaseQRankSum=2.005;DP=684;FS=0.481;HRun=0;HaplotypeScore=172.2828;InbreedingCoeff=0.0372;MQ=36.86;MQ0=76;MQRankSum=-0.028;QD=4.69;ReadPosRankSum=-0.241;VQSLOD=2.9041;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,1:43:14.27:0,14,735	1/1:12,0:10:13.57:123,14,0	./.	./.	1/1:17,3:14:6.01:70,6,0	0/0:27,1:25:12.66:0,13,74	0/0:29,1:28:13.25:0,13,114	0/1:40,0:28:66.23:66,0,179	0/1:29,0:27:30.42:102,0,30	0/1:31,1:23:6.59:237,0,7	./.	0/1:31,0:29:59.53:166,0,60	0/1:31,0:27:99:103,0,102	1/1:22,2:24:22.38:242,22,0	0/0:26,1:26:0.22:0,0,81	0/0:25,0:20:6.36:0,6,33	0/0:26,0:22:4.95:0,5,47	0/1:19,0:19:61.69:76,0,62	0/1:21,0:19:44.14:66,0,44	0/0:17,2:14:2.50:0,2,9	0/0:48,3:36:5.52:0,6,33	1/1:30,0:23:26.59:190,27,0	0/1:22,3:20:43.85:105,0,44	0/1:37,0:33:75.33:147,0,75	1/1:18,0:15:7.63:75,8,0	0/1:24,0:14:25.12:73,0,25	1/1:13,3:14:24.52:222,25,0	1/1:2,0:2:5.73:36,6,0
chr10	77759922	.	T	TCA	3475.65	PASS	AB=0.837;AC=29;AF=0.518;AN=56;BaseQRankSum=3.335;DP=778;FS=3.865;HRun=0;HaplotypeScore=166.5806;InbreedingCoeff=0.1967;MQ=57.89;MQ0=6;MQRankSum=-0.818;QD=7.51;ReadPosRankSum=-3.687;VQSLOD=2.3944;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:64:99:0,147,1844	1/1:4,0:3:3.45:21,3,0	0/0:34,0:17:23.75:0,24,307	0/0:49,0:29:62.95:0,63,753	0/1:18,0:23:9.92:67,0,10	1/1:5,4:9:15.05:226,15,0	0/1:23,7:30:34.59:308,0,35	1/1:26,1:27:20.92:201,21,0	0/0:29,1:30:7.97:0,8,377	1/1:26,0:26:15.29:138,15,0	1/1:3,1:25:3.01:46,3,0	0/0:34,0:33:3.47:0,3,158	0/1:38,1:39:12.28:12,0,508	0/1:20,0:23:14:14,0,25	1/1:12,18:32:26.45:410,26,0	0/1:20,11:30:51.16:510,0,51	0/1:26,14:39:71.65:734,0,72	0/0:21,0:21:1.69:0,2,220	1/1:4,0:13:24.25:184,24,0	1/1:16,0:16:17.59:143,18,0	0/0:15,1:31:0.83:0,1,2	0/0:26,2:26:24.82:0,25,270	0/0:23,0:23:3.02:0,3,112	0/1:47,1:48:38.14:38,0,364	0/1:10,12:22:55.15:201,0,55	0/1:23,0:23:7.39:113,0,7	1/1:9,0:20:8.23:52,8,0	1/1:1,0:7:8.22:59,8,0
chr10	77759933	.	T	TAC	7836.99	PASS	AB=0.915;AC=40;AF=0.714;AN=56;BaseQRankSum=3.426;DP=812;FS=16.930;HRun=0;HaplotypeScore=149.1498;InbreedingCoeff=0.1005;MQ=49.80;MQ0=14;MQRankSum=1.870;QD=11.87;ReadPosRankSum=0.095;VQSLOD=3.4635;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:60:99:0,135,1514	1/1:4,0:3:3.45:21,3,0	0/0:37,0:10:12.03:0,12,137	0/0:54,0:26:23.96:0,24,221	0/1:28,0:27:10.32:62,0,10	1/1:9,0:9:15.05:226,15,0	0/1:28,0:28:34.58:309,0,35	1/1:29,0:29:12.39:107,12,0	0/1:26,8:34:3.86:763,0,4	1/1:27,0:26:19.05:114,19,0	1/1:21,0:21:3.01:46,3,0	1/1:13,23:36:51.16:774,51,0	0/1:26,12:37:10.96:644,0,11	0/1:21,0:21:20.15:36,0,20	1/1:27,0:27:26.45:407,26,0	0/1:30,0:29:26.15:518,0,26	0/1:41,0:40:75.36:720,0,75	1/1:22,0:24:23.81:162,24,0	1/1:19,0:16:22.04:157,22,0	1/1:20,0:19:19.50:166,20,0	1/1:35,0:35:8.44:71,8,0	1/1:26,5:28:10.06:309,10,0	0/1:9,21:30:7.05:343,0,7	1/1:26,24:51:25.06:1463,25,0	0/1:21,0:21:55.09:201,0,55	0/1:27,0:26:2.59:123,0,3	1/1:19,0:19:6.30:38,6,0	1/1:8,0:6:8.22:59,8,0
chr10	77760039	.	C	CAG	11622.30	PASS	AB=0.608;AC=31;AF=0.554;AN=56;BaseQRankSum=-12.659;DP=799;FS=11.178;HRun=0;HaplotypeScore=109.7562;InbreedingCoeff=0.7594;MQ=63.25;MQ0=22;MQRankSum=-1.055;QD=26.72;ReadPosRankSum=1.121;VQSLOD=5.7693;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:59:99:0,120,1424	0/0:10,0:12:24.07:0,24,294	0/0:49,0:20:19.44:0,19,279	0/0:83,0:32:10.50:0,11,168	1/1:9,20:28:24.96:577,25,0	1/1:4,9:13:9.03:148,9,0	0/1:11,18:29:32.24:549,0,32	1/1:9,21:30:60.20:942,60,0	0/0:20,0:20:57.17:0,57,694	1/1:13,13:26:25.98:875,26,0	1/1:2,12:14:24.08:379,24,0	0/0:24,0:24:53.34:0,53,705	0/0:21,0:21:57.18:0,57,703	1/1:7,13:20:13.99:740,14,0	1/1:8,25:32:84.29:1356,84,0	0/1:15,19:34:98.15:1035,0,98	1/1:3,31:33:31.81:1044,32,0	0/0:27,0:27:60.09:0,60,684	1/1:11,9:19:24.05:357,24,0	1/1:6,14:18:15.05:246,15,0	0/1:8,26:35:38.87:776,0,39	0/0:18,0:19:38.93:0,39,438	0/0:16,0:16:26.82:0,27,271	0/0:33,0:33:81.20:0,81,962	1/1:9,20:29:13.98:734,14,0	1/1:6,15:21:42.12:641,42,0	1/1:4,24:27:48.16:787,48,0	1/1:6,12:18:27.09:437,27,0
chr10	77760152	.	C	CT	16763.38	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-8.920;DP=598;FS=8.159;HRun=6;HaplotypeScore=53.0007;InbreedingCoeff=0.9978;MQ=78.19;MQ0=0;MQRankSum=-5.109;QD=30.76;ReadPosRankSum=3.216;VQSLOD=5.3013;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:60.13:0,60,611	1/1:1,8:9:21.07:264,21,0	0/0:16,0:15:38.92:0,39,355	0/0:12,0:12:32.62:0,33,277	1/1:3,19:22:48.15:601,48,0	1/1:1,18:19:48.15:604,48,0	1/1:0,15:15:36.12:453,36,0	1/1:6,29:35:87.22:1039,87,0	1/1:2,20:22:45.14:566,45,0	1/1:1,15:16:45.12:550,45,0	1/1:1,23:24:63.20:792,63,0	1/1:1,19:20:51.16:638,51,0	1/1:3,24:27:66.21:830,66,0	1/1:0,15:15:39.12:491,39,0	1/1:0,20:20:51.16:642,51,0	1/1:2,19:21:51.16:642,51,0	1/1:2,22:24:57.18:717,57,0	1/1:1,14:15:39.12:489,39,0	1/1:4,12:16:36.10:439,36,0	1/1:2,36:38:99:1247,105,0	1/1:0,9:9:27.09:340,27,0	1/1:1,21:22:54.17:678,54,0	1/1:2,31:33:93.29:1170,93,0	1/1:2,17:19:42.13:528,42,0	1/1:1,31:32:87.28:1095,87,0	1/1:4,29:33:78.24:968,78,0	1/1:3,19:22:36.12:453,36,0	1/1:1,16:17:42.13:528,42,0
chr10	77761484	.	T	TG	6925.55	PASS	AB=0.654;AC=30;AF=0.536;AN=56;BaseQRankSum=-10.091;DP=646;FS=1.941;HRun=9;HaplotypeScore=104.1213;InbreedingCoeff=0.7712;MQ=83.13;MQ0=0;MQRankSum=-0.578;QD=19.51;ReadPosRankSum=-1.085;VQSLOD=4.2463;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:83.95:0,84,728	0/0:7,0:7:17.98:0,18,153	0/0:23,0:23:16.68:0,17,276	0/0:24,0:24:40.21:0,40,354	1/1:3,10:14:18.01:199,18,0	1/1:7,14:21:54.11:571,54,0	0/1:8,17:25:6.43:387,0,6	1/1:11,15:27:21.87:433,22,0	0/0:5,0:35:59.07:0,59,173	0/1:10,6:16:30.57:145,0,31	0/1:8,7:15:1.99:208,0,2	0/0:7,0:42:69.03:0,69,203	0/0:6,0:31:50.44:0,50,147	1/1:5,17:22:42.11:464,42,0	1/1:7,21:28:72.18:788,72,0	1/1:6,22:29:50.97:545,51,0	1/1:4,27:31:72.19:796,72,0	0/0:2,0:21:36.66:0,37,108	1/1:0,6:6:18.05:199,18,0	0/1:9,16:25:1.05:420,0,1	1/1:7,14:23:35.76:360,36,0	0/0:4,0:27:45.28:0,45,132	0/0:14,0:14:29.98:0,30,260	0/0:3,0:31:57.03:0,57,167	1/1:4,11:17:10.03:339,10,0	1/1:9,15:25:38.13:445,38,0	1/1:3,16:19:39.10:428,39,0	1/1:3,9:12:18.05:198,18,0
chr10	77762398	.	GGTGTGT	G	5938.30	PASS	AB=0.827;AC=35;AF=0.648;AN=54;BaseQRankSum=-0.872;DP=805;FS=4.207;HRun=0;HaplotypeScore=213.6277;InbreedingCoeff=0.4363;MQ=48.46;MQ0=25;MQRankSum=-2.897;QD=10.84;ReadPosRankSum=2.115;VQSLOD=3.9012;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:46:57.13:0,57,1435	0/1:7,0:12:0.07:0,0,168	./.	0/0:36,0:10:0:0,0,0	1/1:15,7:21:2.87:62,3,0	1/1:9,17:26:9.03:166,9,0	1/1:15,12:28:5.15:69,5,0	0/1:32,4:34:17.61:134,0,18	0/0:29,0:30:6.02:0,6,143	1/1:19,12:34:49.48:808,49,0	1/1:2,8:13:10.27:166,10,0	0/1:28,0:31:2.74:3,0,140	0/0:13,0:14:3.90:0,4,41	1/1:14,10:25:22.01:434,22,0	1/1:20,18:40:36.59:703,37,0	1/1:9,14:24:27.56:535,28,0	1/1:22,6:31:24.17:483,24,0	0/0:29,0:28:26.15:0,26,271	1/1:16,3:18:3.65:120,4,0	1/1:16,16:34:16.03:292,16,0	1/1:32,17:50:2.03:5,2,0	0/0:19,0:27:7.31:0,7,102	1/1:25,0:28:0.46:1,0,0	0/0:40,0:41:1.57:0,2,34	1/1:11,12:24:16.84:315,17,0	0/1:12,14:28:37.87:839,0,38	1/1:11,5:22:35.52:632,36,0	0/1:6,8:14:6.93:174,0,7
chr10	77762434	.	T	TGTGTGTGTGC	971.61	PASS	AB=0.829;AC=11;AF=0.196;AN=56;BaseQRankSum=1.806;DP=669;FS=1.676;HRun=0;HaplotypeScore=246.6289;InbreedingCoeff=0.4483;MQ=53.45;MQ0=9;MQRankSum=-4.116;QD=6.19;ReadPosRankSum=0.088;VQSLOD=2.2330;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:83.62:0,84,1616	0/1:11,0:12:71.29:136,0,71	0/0:6,0:5:1.51:0,2,18	0/0:4,0:4:7.09:0,7,53	0/0:16,0:15:11.88:0,12,132	0/0:31,0:30:38.95:0,39,451	0/0:34,0:33:44.30:0,44,367	0/0:17,0:16:29.87:0,30,262	1/1:8,8:20:2.67:58,3,0	0/0:26,0:26:62.90:0,63,958	0/0:17,0:17:21.39:0,21,270	1/1:12,15:34:16.90:274,17,0	1/1:4,5:14:6.91:142,7,0	0/0:19,0:19:39.49:0,39,494	0/0:27,0:27:47.72:0,48,749	0/0:26,0:26:57.42:0,57,781	0/0:30,0:30:59.05:0,59,698	0/1:7,0:30:12.05:449,0,12	0/0:7,0:5:12.01:0,12,212	0/0:22,0:22:23.97:0,24,370	0/0:44,0:44:41.93:0,42,396	1/1:20,2:24:1.21:35,1,0	0/0:13,1:30:1.52:0,2,4	0/0:14,24:46:1.29:0,1,3	0/1:22,0:22:23.89:24,0,330	0/0:27,0:25:31.63:0,32,750	0/0:30,0:29:47.38:0,47,916	0/0:10,0:10:17.96:0,18,272
chr10	77762763	.	TCTCCTC	T	11962.34	PASS	AB=0.509;AC=35;AF=0.625;AN=56;BaseQRankSum=-8.912;DP=621;FS=0.386;HRun=0;HaplotypeScore=152.7232;InbreedingCoeff=0.9119;MQ=56.73;MQ0=6;MQRankSum=-7.576;QD=31.40;ReadPosRankSum=-2.891;VQSLOD=4.2593;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:66.23:0,66,1915	0/0:1,0:11:26.59:0,27,168	0/0:25,0:14:24.01:0,24,410	0/0:21,0:12:9.09:0,9,266	1/1:3,28:31:84.22:1678,84,0	1/1:5,20:25:27.09:568,27,0	1/1:3,12:15:15.05:303,15,0	1/1:9,19:28:54.04:889,54,0	0/0:6,0:27:47.28:0,47,304	1/1:9,24:33:72.17:1371,72,0	1/1:6,20:26:42.01:767,42,0	0/0:3,0:17:32.56:0,33,213	0/0:5,0:26:53.11:0,53,340	1/1:2,15:16:36.12:777,36,0	1/1:1,12:13:15.05:324,15,0	1/1:5,10:15:21.07:446,21,0	1/1:8,10:18:12.18:279,12,0	0/0:8,0:25:47.30:0,47,319	1/1:4,12:17:35.94:586,36,0	1/1:5,19:24:51.12:1032,51,0	1/1:3,7:10:9.59:209,10,0	0/1:1,1:27:6.30:6,0,316	0/0:3,0:23:41.17:0,41,262	0/0:5,0:36:73.98:0,74,481	1/1:3,18:21:33.11:713,33,0	1/1:2,14:15:42.08:783,42,0	1/1:7,16:23:20.21:452,20,0	1/1:3,19:22:36.12:778,36,0
chr10	77766116	.	T	TA	7176.67	PASS	AB=0.558;AC=49;AF=0.875;AN=56;BaseQRankSum=-3.589;DP=536;FS=1.333;HRun=12;HaplotypeScore=69.1412;InbreedingCoeff=0.6906;MQ=76.69;MQ0=0;MQRankSum=-0.735;QD=15.08;ReadPosRankSum=0.696;VQSLOD=5.6974;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:55.35:0,55,411	1/1:1,7:9:20.87:189,21,0	0/0:10,0:10:12.84:0,13,70	0/0:20,0:20:15.38:0,15,79	1/1:0,13:14:32.89:306,33,0	1/1:7,11:19:4.97:197,5,0	1/1:7,22:29:10.17:541,10,0	1/1:8,20:28:54.01:491,54,0	1/1:2,1:11:17.21:100,17,0	1/1:5,18:23:48.04:458,48,0	1/1:3,11:14:24.04:234,24,0	1/1:3,0:23:45.23:225,45,0	1/1:4,2:16:22.89:129,23,0	1/1:2,14:17:20.87:189,21,0	1/1:4,9:13:18.03:175,18,0	1/1:2,12:14:8.14:241,8,0	1/1:4,30:34:81.12:783,81,0	1/1:4,1:23:51.45:280,51,0	1/1:8,8:17:26.86:239,27,0	1/1:2,13:15:32.96:302,33,0	1/1:6,14:20:1.25:336,1,0	1/1:5,2:28:54.44:298,54,0	1/1:3,0:12:14.78:76,15,0	1/1:3,0:25:51.29:267,51,0	0/1:5,19:24:10.51:306,0,11	1/1:6,16:24:47.88:439,48,0	1/1:6,12:19:11.11:261,11,0	1/1:0,4:4:12.02:117,12,0
chr10	77766594	.	AACACAC	A	126.42	PASS	AB=0.767;AC=9;AF=0.205;AN=44;BaseQRankSum=4.014;DP=509;FS=3.917;HRun=0;HaplotypeScore=119.0732;InbreedingCoeff=0.4162;MQ=56.02;MQ0=17;MQRankSum=-2.956;QD=1.20;ReadPosRankSum=-1.127;VQSLOD=2.1534;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:21.07:0,21,508	./.	./.	./.	0/0:12,0:14:6.02:0,6,104	0/0:17,0:17:6.02:0,6,140	0/0:31,0:32:5.98:0,6,46	./.	0/0:10,0:11:15.04:0,15,286	0/0:16,0:15:8.06:0,8,84	./.	0/0:10,0:10:2.15:0,2,94	0/0:25,0:24:29.10:0,29,444	1/1:24,0:27:0.04:1,0,0	1/1:9,5:13:8.85:61,9,0	0/1:16,4:22:15.42:110,0,15	0/0:15,0:17:6.81:0,7,89	1/1:21,3:23:3.25:59,3,0	0/0:15,0:14:9.47:0,9,94	./.	0/0:51,0:51:29.99:0,30,446	0/0:10,0:13:15.05:0,15,375	0/0:14,0:13:9.03:0,9,219	0/0:42,0:46:63.67:0,64,1295	1/1:14,1:16:1.44:3,1,0	0/0:21,0:21:8.97:0,9,80	0/0:8,0:8:6.02:0,6,105	0/0:6,0:5:6.02:0,6,87
chr10	77767397	.	G	GA	12802.40	PASS	AB=0.558;AC=49;AF=0.875;AN=56;BaseQRankSum=-8.463;DP=643;FS=6.405;HRun=10;HaplotypeScore=69.3284;InbreedingCoeff=0.7228;MQ=70.01;MQ0=0;MQRankSum=-0.374;QD=21.81;ReadPosRankSum=0.158;VQSLOD=5.7295;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:91.88:0,92,737	1/1:1,9:10:21.05:224,21,0	0/0:8,0:9:16.97:0,17,124	0/0:10,0:10:2.80:0,3,94	1/1:6,23:31:71.81:720,72,0	0/1:5,19:24:13.78:483,0,14	1/1:5,21:25:35.51:583,36,0	1/1:8,21:32:71.65:694,72,0	1/1:3,18:21:26.49:486,26,0	1/1:4,24:28:50.50:719,50,0	1/1:7,18:25:51.04:514,51,0	1/1:6,23:29:16.84:578,17,0	1/1:4,13:17:17.46:390,17,0	1/1:3,19:22:26.48:487,26,0	1/1:4,14:18:20.44:412,20,0	1/1:1,18:19:42.11:448,42,0	1/1:4,17:22:7.69:477,8,0	1/1:7,16:25:26.22:452,26,0	1/1:6,12:18:39.07:404,39,0	1/1:10,27:38:24.91:693,25,0	1/1:1,11:12:24.06:256,24,0	1/1:6,17:24:59.76:584,60,0	1/1:7,22:29:32.50:551,32,0	1/1:4,9:14:8.27:278,8,0	1/1:3,25:28:47.53:706,48,0	1/1:7,25:33:74.95:753,75,0	1/1:8,24:32:16.87:591,17,0	1/1:0,10:10:30.08:320,30,0
chr10	77767993	.	T	TTGTGTGTG	3034	PASS	AB=0.825;AC=21;AF=0.375;AN=56;BaseQRankSum=0.509;DP=773;FS=3.935;HRun=0;HaplotypeScore=228.6001;InbreedingCoeff=0.2637;MQ=65.02;MQ0=5;MQRankSum=-1.082;QD=7.04;ReadPosRankSum=-6.116;VQSLOD=1.0589;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:54:59.32:0,59,1409	0/0:14,0:14:14.99:0,15,377	0/0:28,0:21:1.61:0,2,34	0/1:33,0:20:0:0,0,0	0/1:17,0:23:83.47:136,0,83	0/0:23,0:23:8.99:0,9,97	0/0:27,0:29:44.99:0,45,823	0/0:28,0:28:25.28:0,25,445	1/1:16,10:28:18.95:549,19,0	0/1:18,0:21:90.27:90,0,217	0/1:16,0:20:35.22:35,0,104	1/1:12,5:27:11.79:491,12,0	1/1:18,12:33:17.98:552,18,0	0/1:19,0:29:61.73:62,0,114	0/0:26,0:28:48.15:0,48,1117	0/0:23,0:24:48.14:0,48,1088	0/0:24,0:24:42.14:0,42,1027	1/1:19,0:19:19.70:328,20,0	0/1:13,0:18:46.52:47,0,130	0/0:9,0:19:15.92:0,16,152	0/1:37,0:46:99:285,0,183	0/0:11,8:27:0.94:0,1,2	1/1:20,6:31:4.52:216,5,0	1/1:22,12:42:6.16:149,6,0	0/0:25,0:26:45.15:0,45,1112	0/1:25,0:32:50.94:200,0,51	0/1:17,0:26:74.29:74,0,233	0/0:8,0:14:26.34:0,26,260
chr10	77768076	.	CTATCACTTTCT	C	22886.17	PASS	AB=0.596;AC=33;AF=0.589;AN=56;BaseQRankSum=17.002;DP=701;FS=1.900;HRun=0;HaplotypeScore=256.2765;InbreedingCoeff=0.9151;MQ=83.22;MQ0=0;MQRankSum=-14.104;QD=54.36;ReadPosRankSum=-7.271;VQSLOD=2.6966;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,135,7369	0/0:13,0:13:30.10:0,30,1563	0/0:25,0:25:42.13:0,42,1679	0/0:35,0:35:51.58:0,52,2621	1/1:6,14:20:36.08:862,36,0	1/1:5,17:22:39.13:1256,39,0	1/1:5,17:22:33.11:1101,33,0	1/1:18,17:35:51.16:1195,51,0	0/0:27,0:27:66.23:0,66,3584	1/1:5,28:33:81.27:2471,81,0	1/1:5,15:20:36.02:840,36,0	0/0:21,0:21:45.14:0,45,2348	0/0:23,0:23:63.22:0,63,3292	1/1:7,25:32:66.23:2092,66,0	1/1:6,27:33:69.24:2164,69,0	0/1:11,23:34:99:1838,0,106	1/1:7,16:23:36.12:1195,36,0	0/0:19,0:19:54.19:0,54,2792	1/1:14,9:21:24.06:638,24,0	1/1:3,17:20:45.11:1421,45,0	1/1:10,12:22:15.05:454,15,0	0/0:31,0:31:75.26:0,75,3913	0/0:13,0:13:32.45:0,32,1790	0/0:24,0:24:57.20:0,57,2983	1/1:5,17:22:42.14:1356,42,0	1/1:3,18:21:51.65:1601,52,0	1/1:7,25:32:63.22:2102,63,0	1/1:3,4:7:8.86:300,9,0
chr10	77770366	.	TTCTC	T	511.14	PASS	AB=1.000;AC=13;AF=0.260;AN=50;BaseQRankSum=0.883;DP=577;FS=22.113;HRun=0;HaplotypeScore=96.2973;InbreedingCoeff=0.6711;MQ=68.37;MQ0=13;MQRankSum=0.080;QD=4.12;ReadPosRankSum=2.938;VQSLOD=-0.4034;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:24:20.78:0,21,319	./.	./.	./.	0/0:19,0:19:9.03:0,9,143	1/1:20,3:24:5.96:65,6,0	1/1:11,3:16:2.74:46,3,0	0/0:36,0:35:6.02:0,6,77	0/0:12,0:11:3.01:0,3,65	0/0:20,0:23:12.51:0,13,212	0/0:29,0:29:9.03:0,9,168	0/0:17,0:16:11.94:0,12,180	0/0:14,0:14:2.92:0,3,52	0/1:17,0:15:0.13:0,0,0	1/1:16,2:19:9:114,9,0	1/1:9,5:15:9.02:121,9,0	1/1:11,4:14:12.03:167,12,0	0/0:11,0:18:12.04:0,12,185	0/0:12,0:12:12.04:0,12,172	0/0:27,0:26:18.06:0,18,316	0/0:17,0:16:15.05:0,15,235	0/0:28,0:29:9.03:0,9,138	0/0:25,0:25:15.05:0,15,254	0/0:23,0:21:2.83:0,3,18	1/1:12,3:17:11.03:150,11,0	0/0:29,0:28:23.99:0,24,327	0/0:19,0:23:15.05:0,15,246	0/0:9,0:9:6.01:0,6,59
chr10	77772058	.	TG	T	9803.04	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-8.201;DP=578;FS=0.000;HRun=9;HaplotypeScore=80.8787;InbreedingCoeff=0.9927;MQ=75.48;MQ0=0;MQRankSum=-0.761;QD=23.07;ReadPosRankSum=1.528;VQSLOD=5.5303;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:39.10:0,39,439	1/1:0,12:12:36.02:329,36,0	0/0:12,0:12:23.81:0,24,224	0/0:11,0:11:21.05:0,21,232	1/1:3,20:23:54.03:494,54,0	1/1:3,30:33:90.03:818,90,0	1/1:4,30:34:84.04:769,84,0	1/1:11,25:36:75:677,75,0	0/0:4,0:20:39.84:0,40,220	1/1:5,25:30:75.04:686,75,0	1/1:1,32:33:93.05:851,93,0	0/0:3,0:16:31.32:0,31,159	0/0:1,0:13:28.41:0,28,144	1/1:0,17:17:45.02:412,45,0	1/1:0,16:16:48.03:439,48,0	1/1:4,21:26:45.43:507,45,0	1/1:4,14:18:39.02:357,39,0	0/0:31,0:31:75.21:0,75,855	1/1:2,22:24:69:617,69,0	1/1:3,20:23:57.02:522,57,0	1/1:3,18:21:48.02:439,48,0	0/0:0,0:10:25.57:0,26,130	0/0:0,0:8:11.02:0,11,57	0/0:1,0:16:45.61:0,46,236	1/1:3,10:13:27.01:247,27,0	1/1:2,29:31:87.03:791,87,0	1/1:5,19:24:60.01:544,60,0	1/1:0,11:11:33.02:302,33,0
chr10	77773668	.	A	AT	3943.67	PASS	AB=0.857;AC=15;AF=0.268;AN=56;BaseQRankSum=9.079;DP=650;FS=1.227;HRun=8;HaplotypeScore=77.3479;InbreedingCoeff=0.9252;MQ=78.67;MQ0=1;MQRankSum=-1.356;QD=24.65;ReadPosRankSum=2.274;VQSLOD=4.4771;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,2:35:61.28:0,61,805	0/0:19,0:19:48.02:0,48,439	0/0:23,0:24:37.29:0,37,280	0/0:19,0:17:19.43:0,19,177	0/0:31,0:31:80.98:0,81,726	0/0:21,0:21:51:0,51,462	0/0:20,0:20:53.95:0,54,480	0/0:35,0:35:78.01:0,78,707	1/1:4,16:20:45.13:519,45,0	0/0:27,0:27:75.03:0,75,686	0/0:22,0:22:32.97:0,33,490	1/1:6,22:28:38.73:700,39,0	1/1:3,20:23:57.17:658,57,0	0/0:18,0:18:48.03:0,48,439	0/0:23,0:23:66.04:0,66,604	0/1:10,2:12:4.61:5,0,212	0/0:30,0:30:72.01:0,72,654	1/1:1,18:19:48.14:554,48,0	0/0:19,0:19:42.02:0,42,384	0/0:36,0:36:93.02:0,93,847	0/0:26,0:26:68.97:0,69,618	1/1:3,17:20:45.09:504,45,0	1/1:6,15:21:45.13:519,45,0	1/1:1,16:17:42.12:485,42,0	0/0:20,0:20:54:0,54,488	0/0:31,0:31:84.04:0,84,768	0/0:30,0:30:77.77:0,78,698	0/0:4,0:4:12.01:0,12,110
chr10	77773849	.	CGT	C	438.90	PASS	AB=0.991;AC=23;AF=0.411;AN=56;BaseQRankSum=6.890;DP=483;FS=0.591;HRun=0;HaplotypeScore=104.3083;InbreedingCoeff=-0.2204;MQ=62.71;MQ0=8;MQRankSum=-1.101;QD=1.29;ReadPosRankSum=1.183;VQSLOD=1.9859;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:68.57:0,69,976	0/1:8,0:8:5.77:6,0,18	0/1:7,0:3:5.70:6,0,12	0/0:17,0:10:6.30:0,6,108	0/1:14,0:14:17.66:41,0,18	0/0:10,0:10:6.49:0,6,51	0/1:17,2:19:11.02:11,0,18	0/1:23,0:23:4.53:5,0,26	0/1:15,1:16:12.30:46,0,12	0/1:14,0:14:8.07:8,0,100	0/0:12,0:12:0.42:0,0,63	0/1:28,0:27:7.07:19,0,7	0/1:17,0:17:10.96:11,0,20	1/1:16,0:16:13.66:65,14,0	0/1:13,0:13:11.51:12,0,38	0/1:14,0:14:13.48:50,0,13	1/1:10,1:11:14.31:94,14,0	0/1:29,0:27:37.70:41,0,38	0/0:14,0:14:19.28:0,19,144	0/1:15,0:15:4.07:4,0,41	0/1:27,0:26:20.04:20,0,22	0/1:15,0:15:19.73:20,0,38	0/0:17,0:16:10.26:0,10,70	0/0:28,0:27:3.49:0,3,19	1/1:17,0:17:16.52:85,17,0	0/1:25,0:25:51.09:54,0,51	0/0:14,0:14:6.16:0,6,80	0/1:11,0:11:3.96:4,0,87
chr10	77773851	.	TGC	T	6579.66	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-1.667;DP=469;FS=0.729;HRun=0;HaplotypeScore=83.4021;InbreedingCoeff=0.6732;MQ=61.87;MQ0=8;MQRankSum=-1.444;QD=15.02;ReadPosRankSum=0.005;VQSLOD=4.1494;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:45.06:0,45,563	1/1:7,1:8:8.96:76,9,0	1/1:7,0:3:1.82:5,2,0	0/1:16,0:9:1.87:2,0,24	1/1:13,0:13:23.16:192,23,0	1/1:10,0:10:20.54:168,21,0	1/1:20,0:20:13.67:229,14,0	1/1:23,0:23:65.90:568,66,0	1/1:12,4:16:31.40:246,31,0	1/1:14,0:14:19.48:256,19,0	1/1:10,2:12:8.99:81,9,0	1/1:26,2:27:37.87:309,38,0	1/1:14,3:17:32.67:256,33,0	1/1:12,5:17:32.99:306,33,0	1/1:12,0:12:26.41:203,26,0	1/1:11,3:14:19.94:274,20,0	1/1:2,10:12:12.59:181,13,0	1/1:21,6:25:56.68:464,57,0	1/1:11,0:11:26.27:186,26,0	1/1:13,1:14:29.89:242,30,0	1/1:25,1:25:47.58:404,48,0	1/1:11,4:15:23.58:203,24,0	1/1:16,0:15:29.43:227,29,0	1/1:25,3:27:38.26:294,38,0	1/1:12,4:16:35.45:319,35,0	1/1:22,3:25:58.33:519,58,0	1/1:9,3:12:31.19:218,31,0	1/1:8,1:9:17.88:150,18,0
chr10	77773897	.	CACACACAT	C	4027.80	PASS	AB=0.965;AC=27;AF=0.482;AN=56;BaseQRankSum=-4.544;DP=612;FS=1.393;HRun=0;HaplotypeScore=153.8512;InbreedingCoeff=-0.0173;MQ=55.41;MQ0=33;MQRankSum=1.602;QD=9.95;ReadPosRankSum=-0.458;VQSLOD=1.9660;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:37:77.01:0,77,1402	0/0:11,0:11:2.82:0,3,14	0/0:30,0:15:38.04:0,38,370	0/0:30,0:15:41.75:0,42,398	0/0:20,0:19:2.80:0,3,13	0/1:14,0:14:96.85:120,0,97	0/1:32,0:31:99:189,0,523	0/1:26,0:24:99:332,0,150	1/1:4,13:18:18.03:364,18,0	0/1:18,0:17:99:199,0,170	0/0:18,0:15:5.69:0,6,40	1/1:6,20:24:5.51:100,6,0	1/1:18,0:18:27.37:205,27,0	0/0:21,0:20:7.56:0,8,124	0/1:16,0:16:99:135,0,287	0/1:14,0:14:47.04:47,0,313	0/1:20,0:19:99:141,0,166	1/1:23,1:24:14.42:715,14,0	0/1:4,10:13:7.49:220,0,7	0/1:23,0:21:4.15:45,0,4	0/0:37,0:32:9.35:0,9,94	1/1:13,0:14:12.04:317,12,0	1/1:4,14:18:6.01:93,6,0	1/1:25,0:23:20.99:208,21,0	0/1:23,0:22:99:155,0,275	0/1:28,0:24:80.07:226,0,80	0/1:19,0:19:93.57:113,0,94	0/1:10,0:9:99:103,0,120
chr10	77773899	.	CACACAT	C	4645.83	PASS	AB=0.985;AC=38;AF=0.679;AN=56;BaseQRankSum=-0.155;DP=603;FS=9.687;HRun=0;HaplotypeScore=137.6624;InbreedingCoeff=-0.0207;MQ=60.00;MQ0=32;MQRankSum=-0.377;QD=9.33;ReadPosRankSum=1.105;VQSLOD=3.3752;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:37:67.89:0,68,1045	1/1:11,0:12:2.74:12,3,0	0/0:33,0:18:47.05:0,47,454	0/0:32,0:17:47.74:0,48,449	1/1:19,0:18:2.84:14,3,0	0/1:13,0:13:34.83:146,0,35	0/1:31,0:30:99:193,0,322	0/1:28,0:26:52.37:402,0,52	1/1:15,3:18:17.08:255,17,0	0/1:17,0:16:41.56:243,0,42	1/1:17,0:14:2.98:11,3,0	1/1:25,1:23:5.85:70,6,0	1/1:13,3:18:30.51:218,31,0	0/1:19,0:18:4.67:99,0,5	0/1:16,0:16:99:160,0,135	0/1:14,0:14:99:100,0,161	0/1:17,1:17:60.07:166,0,60	1/1:18,5:22:34.35:615,34,0	1/1:15,0:14:14.75:242,15,0	1/1:22,0:20:11.66:120,12,0	0/1:35,0:31:21.90:44,0,22	1/1:2,11:14:12.04:229,12,0	1/1:19,0:18:6.01:58,6,0	1/1:20,3:21:21.10:167,21,0	0/1:23,0:22:99:222,0,107	1/1:27,0:24:52.66:414,53,0	0/1:18,0:18:3.92:263,0,4	0/1:9,1:9:6.40:181,0,6
chr10	77773901	.	CACAT	C	5446.11	PASS	AB=0.978;AC=47;AF=0.839;AN=56;BaseQRankSum=0.421;DP=594;FS=14.453;HRun=0;HaplotypeScore=120.1945;InbreedingCoeff=0.4233;MQ=62.88;MQ0=31;MQRankSum=-2.256;QD=11.16;ReadPosRankSum=1.316;VQSLOD=3.4839;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:35:59.84:0,60,784	1/1:12,0:12:3.01:56,3,0	0/0:34,0:19:50.01:0,50,474	0/0:34,0:19:53.71:0,54,494	1/1:2,18:19:3.01:58,3,0	1/1:14,0:14:17.77:208,18,0	0/1:30,0:29:99:209,0,122	1/1:31,0:28:36.70:481,37,0	1/1:18,0:18:14.71:166,15,0	1/1:15,0:14:36.58:325,37,0	1/1:15,1:13:3.48:55,3,0	1/1:26,0:23:3.48:44,3,0	1/1:16,0:16:26.35:186,26,0	1/1:18,0:17:17.98:319,18,0	0/1:15,0:15:45.53:163,0,46	0/1:13,0:14:41.23:137,0,41	1/1:19,0:18:14.95:245,15,0	1/1:23,0:21:43.46:510,43,0	1/1:15,0:14:32.51:246,33,0	1/1:20,1:19:9.65:79,10,0	1/1:33,0:30:3.30:99,3,0	1/1:14,0:14:12.04:161,12,0	1/1:18,0:17:5.60:27,6,0	1/1:23,0:21:20.73:148,21,0	1/1:22,1:22:12.68:341,13,0	1/1:7,20:23:58:633,58,0	1/1:17,0:17:35.41:335,35,0	1/1:10,0:9:18.02:216,18,0
chr10	77773903	.	CAT	C	5556.49	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=3.027;DP=565;FS=27.584;HRun=0;HaplotypeScore=104.2389;InbreedingCoeff=0.7210;MQ=64.08;MQ0=29;MQRankSum=-1.955;QD=12.03;ReadPosRankSum=1.021;VQSLOD=2.9477;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:32:36.50:0,37,552	1/1:1,10:11:3:37,3,0	0/0:34,0:19:50.01:0,50,474	0/0:34,0:19:53.88:0,54,494	1/1:19,1:19:3:26,3,0	1/1:12,0:12:29.96:252,30,0	1/1:28,1:28:20.92:290,21,0	1/1:29,0:26:67.88:569,68,0	1/1:17,0:17:13.28:100,13,0	1/1:15,0:14:41.01:389,41,0	1/1:4,10:11:3.01:38,3,0	1/1:26,0:23:4.82:33,5,0	1/1:16,0:16:26.39:186,26,0	1/1:4,13:16:17.79:217,18,0	1/1:13,0:13:29.15:230,29,0	1/1:13,1:14:24.22:289,24,0	1/1:18,1:18:32.55:326,33,0	1/1:20,0:19:50.82:435,51,0	1/1:15,0:14:34.68:266,35,0	1/1:4,17:19:8.76:60,9,0	1/1:5,25:28:9.03:111,9,0	1/1:12,0:12:11.89:99,12,0	1/1:18,0:17:1.82:5,2,0	1/1:19,0:18:18.23:139,18,0	1/1:18,3:20:44.99:441,45,0	1/1:25,2:23:56.73:506,57,0	1/1:15,3:18:43.23:343,43,0	1/1:9,0:8:20.20:170,20,0
chr10	77775148	.	T	TGC	1622.81	PASS	AB=0.992;AC=18;AF=0.321;AN=56;BaseQRankSum=-2.148;DP=537;FS=0.463;HRun=0;HaplotypeScore=170.8854;InbreedingCoeff=-0.2182;MQ=56.72;MQ0=3;MQRankSum=-2.576;QD=5.01;ReadPosRankSum=-2.320;VQSLOD=2.7722;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:87.13:0,87,997	0/0:2,0:14:17.30:0,17,115	0/0:22,0:12:17.08:0,17,115	0/0:27,0:14:13.79:0,14,108	0/0:19,0:18:2.47:0,2,83	0/1:10,0:10:26.14:26,0,61	0/1:33,0:33:42.28:42,0,154	0/1:14,0:13:5.73:57,0,6	0/1:14,0:17:12.77:13,0,52	0/1:19,0:18:37.96:171,0,38	0/1:10,0:10:5.81:6,0,59	0/1:28,0:29:16.58:17,0,182	0/0:14,0:17:16.25:0,16,149	0/1:21,0:21:42.20:42,0,101	0/0:9,0:9:21.18:0,21,94	0/1:10,0:10:26.29:38,0,26	1/1:10,31:43:40.26:866,40,0	0/0:1,0:18:31.35:0,31,158	1/1:23,1:24:2.96:168,3,0	0/1:26,0:26:24.52:25,0,144	0/1:27,0:28:77.03:107,0,77	0/0:12,0:11:0.21:0,0,40	0/0:6,0:7:2.28:0,2,36	0/0:19,0:22:1.48:0,1,57	0/1:10,1:11:16.05:99,0,16	0/1:25,0:25:82.08:98,0,82	0/1:4,0:4:2.67:3,0,32	0/0:6,0:6:7.59:0,8,29
chr10	77775150	.	C	CGTGTGT	1309.47	PASS	AB=0.974;AC=12;AF=0.214;AN=56;BaseQRankSum=0.358;DP=552;FS=2.176;HRun=0;HaplotypeScore=216.4815;InbreedingCoeff=0.4384;MQ=54.97;MQ0=3;MQRankSum=-1.388;QD=9.49;ReadPosRankSum=0.148;VQSLOD=2.7618;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,114,2434	0/0:14,0:14:3.78:0,4,23	0/0:21,0:11:2.59:0,3,282	0/1:29,0:13:6.80:7,0,341	0/0:22,0:21:36.96:0,37,660	0/0:11,0:11:22.85:0,23,337	0/0:37,0:37:65.11:0,65,1136	0/0:16,0:15:24.41:0,24,310	1/1:11,1:16:14.27:458,14,0	0/0:21,0:20:30.13:0,30,436	0/0:10,0:10:18.06:0,18,358	1/1:21,7:28:15.80:579,16,0	0/1:15,2:17:23.18:177,0,23	0/0:21,0:21:42.11:0,42,766	0/0:9,0:9:24.08:0,24,494	0/0:9,0:9:14.83:0,15,233	0/0:43,0:43:67.80:0,68,615	0/1:18,0:18:7.58:8,0,55	0/0:25,0:25:15.08:0,15,260	0/0:26,0:26:28.68:0,29,973	0/0:29,0:29:40.73:0,41,679	1/1:9,0:11:8.13:170,8,0	1/1:4,2:7:3.19:50,3,0	0/0:12,8:22:1.80:0,2,5	0/1:11,0:11:17.51:18,0,169	0/0:23,0:23:9.10:0,9,656	0/0:4,0:4:7.12:0,7,181	0/0:7,0:7:12.02:0,12,212
chr10	77777246	.	ATGTG	A	5770.98	PASS	AB=0.730;AC=38;AF=0.704;AN=54;BaseQRankSum=0.386;DP=839;FS=3.172;HRun=0;HaplotypeScore=161.6797;InbreedingCoeff=0.6258;MQ=65.26;MQ0=10;MQRankSum=-1.353;QD=9.32;ReadPosRankSum=2.837;VQSLOD=4.1970;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,100,1822	0/0:8,0:7:0:0,0,0	./.	0/0:29,0:24:5.97:0,6,46	1/1:12,9:21:12.01:147,12,0	1/1:5,15:21:21.07:335,21,0	1/1:8,13:21:17.16:373,17,0	1/1:23,12:35:24.47:392,24,0	0/1:10,0:28:24.65:67,0,25	1/1:16,16:31:42.69:655,43,0	1/1:5,12:17:9:118,9,0	1/1:10,0:30:14.71:130,15,0	1/1:6,0:21:3.94:54,4,0	1/1:12,18:30:18.04:248,18,0	1/1:16,25:44:32.58:650,33,0	1/1:11,23:34:24.08:383,24,0	1/1:13,21:34:27.85:519,28,0	1/1:18,0:38:8.53:105,9,0	0/1:19,1:22:3.71:154,0,4	1/1:8,8:16:10.25:188,10,0	1/1:30,43:74:30.30:562,30,0	0/0:6,0:23:2.96:0,3,24	0/0:9,0:16:2.85:0,3,8	1/1:18,0:43:5.74:40,6,0	1/1:14,10:26:15.52:233,16,0	0/0:13,0:36:9.38:0,9,234	1/1:10,17:29:30.08:418,30,0	0/0:5,0:18:24.80:0,25,112
chr10	77777785	.	TACAC	T	1188.71	PASS	AB=0.972;AC=14;AF=0.269;AN=52;BaseQRankSum=-0.719;DP=617;FS=2.610;HRun=0;HaplotypeScore=119.7472;InbreedingCoeff=0.6486;MQ=63.98;MQ0=10;MQRankSum=0.465;QD=7.43;ReadPosRankSum=3.268;VQSLOD=2.4174;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:37:41.61:0,42,709	0/0:5,0:6:6.02:0,6,123	./.	./.	0/1:27,0:27:0.20:0,0,1	0/0:8,0:14:6.02:0,6,83	0/0:20,0:28:11.97:0,12,194	0/0:31,0:31:24.08:0,24,509	1/1:6,4:10:9.03:132,9,0	0/0:26,0:26:44.99:0,45,601	0/0:15,0:15:6.02:0,6,120	1/1:11,0:11:2.98:21,3,0	1/1:12,7:20:12.03:169,12,0	0/0:21,0:21:2.93:0,3,50	0/0:8,0:19:2.96:0,3,52	0/0:19,0:28:10.38:0,10,143	0/0:16,0:32:21.07:0,21,393	0/0:12,0:30:36.57:0,37,587	0/0:8,0:11:10.24:0,10,189	0/0:12,0:18:12.01:0,12,229	0/0:20,0:19:10.84:0,11,145	1/1:11,6:18:9.02:122,9,0	1/1:10,6:16:15.05:236,15,0	1/1:20,19:40:41.97:634,42,0	0/1:10,1:16:38.11:38,0,91	0/0:23,0:23:39.06:0,39,654	0/0:18,0:20:24.55:0,25,469	0/0:3,0:3:9.03:0,9,142
chr10	77779862	.	AT	A	8956.47	PASS	AB=0.552;AC=49;AF=0.875;AN=56;BaseQRankSum=-1.853;DP=567;FS=3.008;HRun=12;HaplotypeScore=63.1816;InbreedingCoeff=0.8550;MQ=77.05;MQ0=0;MQRankSum=-4.692;QD=17.63;ReadPosRankSum=4.596;VQSLOD=5.9152;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,1:20:18.68:0,19,356	1/1:1,7:8:14.94:116,15,0	0/0:22,2:20:21.36:0,21,188	0/0:15,0:14:21.35:0,21,187	1/1:2,24:26:62.11:472,62,0	1/1:4,24:29:64.78:493,65,0	1/1:5,18:23:23.34:364,23,0	1/1:5,19:25:56.71:436,57,0	1/1:2,14:16:35.85:279,36,0	1/1:4,17:21:50.79:394,51,0	1/1:3,16:20:16.40:300,16,0	0/1:3,13:16:4.69:257,0,5	1/1:0,16:16:44.83:348,45,0	1/1:2,18:20:47.81:371,48,0	1/1:2,15:17:32.86:255,33,0	1/1:2,17:19:20.36:341,20,0	1/1:3,17:20:50.80:395,51,0	1/1:3,11:14:32.86:255,33,0	1/1:3,19:22:53.77:418,54,0	1/1:5,21:27:58.75:447,59,0	1/1:2,12:15:21.92:245,22,0	1/1:3,22:25:59.74:464,60,0	1/1:4,21:25:56.76:441,57,0	1/1:2,13:15:35.86:279,36,0	1/1:2,15:17:17.39:318,17,0	1/1:6,20:27:35.58:442,36,0	1/1:7,14:21:44.80:347,45,0	1/1:2,21:24:40.22:478,40,0
chr10	77781093	.	GC	G	7753.07	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-9.046;DP=596;FS=13.320;HRun=8;HaplotypeScore=70.0952;InbreedingCoeff=0.9850;MQ=73.14;MQ0=10;MQRankSum=-0.567;QD=21.72;ReadPosRankSum=1.713;VQSLOD=4.1785;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:48.11:0,48,550	0/0:1,0:6:8.63:0,9,44	0/0:57,0:23:26.32:0,26,264	0/0:37,0:16:29.20:0,29,271	1/1:4,27:31:70.81:701,71,0	1/1:1,16:17:24.04:232,24,0	1/1:1,15:16:24.04:232,24,0	1/1:4,21:25:63.02:582,63,0	0/0:14,0:14:32.52:0,33,264	1/1:4,26:30:81.08:769,81,0	1/1:2,20:22:54.08:519,54,0	0/0:8,0:8:24:0,24,227	0/0:12,0:12:29.90:0,30,252	1/1:1,17:18:33.05:319,33,0	1/1:1,15:16:33.05:319,33,0	1/1:1,6:7:12.02:116,12,0	1/1:0,23:23:57.09:550,57,0	0/0:21,0:21:44.44:0,44,335	1/1:1,20:21:60.06:565,60,0	1/1:3,19:22:34.57:472,35,0	1/1:3,12:15:27.04:261,27,0	0/0:23,0:23:56.28:0,56,441	0/0:22,0:22:50.81:0,51,416	0/0:17,0:17:41.83:0,42,336	1/1:3,16:19:36.05:348,36,0	1/1:1,21:22:63.02:585,63,0	1/1:1,29:30:66.10:636,66,0	1/1:2,21:23:57.09:550,57,0
chr10	77781108	.	TA	T	1977.84	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-7.107;DP=603;FS=4.715;HRun=9;HaplotypeScore=89.6680;InbreedingCoeff=0.9773;MQ=71.58;MQ0=11;MQRankSum=-0.001;QD=16.90;ReadPosRankSum=4.155;VQSLOD=3.9416;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:45.09:0,45,496	0/0:5,0:5:8.99:0,9,82	0/0:66,0:19:11.23:0,11,155	0/0:45,0:19:25.32:0,25,228	0/0:25,0:25:65.34:0,65,511	0/0:12,0:12:26.89:0,27,208	0/0:14,0:14:29.29:0,29,220	0/0:32,0:32:89.89:0,90,797	1/1:0,17:17:33.02:300,33,0	0/0:31,0:31:80.68:0,81,700	0/0:23,0:23:60.84:0,61,480	1/1:2,9:11:18.01:165,18,0	1/1:1,14:15:27.01:247,27,0	0/0:15,0:15:35.86:0,36,285	0/0:13,0:13:38.82:0,39,312	0/0:5,0:5:14.95:0,15,117	0/0:24,0:24:62.60:0,63,459	1/1:1,20:21:39.02:356,39,0	0/0:22,0:22:62.83:0,63,541	0/0:23,1:24:37.79:0,38,468	0/0:11,0:11:29.92:0,30,243	1/1:0,18:18:50.69:423,51,0	1/1:1,20:21:47.89:439,48,0	1/1:1,13:14:27.01:247,27,0	0/0:22,0:22:53.94:0,54,475	0/0:22,0:22:59.36:0,59,496	0/0:36,0:36:85.76:0,86,656	0/0:21,0:21:56.50:0,56,422
chr10	77784221	.	TA	T	1795.07	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=11.770;DP=522;FS=3.811;HRun=11;HaplotypeScore=53.7865;InbreedingCoeff=0.8925;MQ=66.94;MQ0=0;MQRankSum=0.427;QD=14.59;ReadPosRankSum=2.567;VQSLOD=4.0993;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:57.10:0,57,584	1/1:0,7:7:20.98:172,21,0	0/1:6,0:3:7.93:8,0,29	0/0:8,0:8:9:0,9,79	0/0:18,3:21:4.87:0,5,449	0/0:29,0:29:84.20:0,84,889	0/0:16,1:17:14.47:0,14,359	0/0:30,1:31:41.47:0,41,622	1/1:2,11:13:32.95:271,33,0	0/0:19,0:20:44.94:0,45,457	0/0:21,0:21:63.14:0,63,663	1/1:2,11:13:32.96:271,33,0	1/1:3,18:21:38.86:320,39,0	0/0:15,0:15:36.09:0,36,383	0/0:18,1:19:25.60:0,26,495	0/0:19,0:19:51.11:0,51,535	0/0:24,0:24:72.17:0,72,761	1/1:0,0:10:18.80:54,19,0	0/0:23,1:25:35.34:0,35,565	0/0:22,0:22:60.11:0,60,627	0/0:15,0:15:42.11:0,42,448	1/1:4,12:16:26.91:216,27,0	1/1:1,17:18:41.84:345,42,0	1/1:3,16:19:41.94:345,42,0	0/0:22,1:23:42.60:0,43,633	0/0:20,0:20:45.11:0,45,480	0/0:29,0:29:75.19:0,75,799	0/0:17,0:17:27.06:0,27,281
chr10	77785454	.	A	AC	12031.21	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=0.726;DP=606;FS=10.541;HRun=5;HaplotypeScore=83.3961;InbreedingCoeff=0.9625;MQ=72.96;MQ0=0;MQRankSum=-4.649;QD=33.42;ReadPosRankSum=-0.062;VQSLOD=4.4937;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,99,1050	0/0:14,0:14:42.09:0,42,443	0/0:10,0:11:1.99:0,2,132	0/0:16,0:14:24.04:0,24,322	1/1:0,19:19:39.13:510,39,0	1/1:3,19:22:57.18:745,57,0	1/1:8,11:19:33.09:411,33,0	1/1:8,20:28:66.19:837,66,0	0/0:23,0:23:66.17:0,66,709	1/1:4,20:24:66.21:868,66,0	1/1:6,9:15:30.08:380,30,0	0/0:29,0:29:78.15:0,78,812	0/0:26,0:26:75.17:0,75,796	1/1:2,22:24:69.21:886,69,0	1/1:4,19:23:66.17:848,66,0	1/1:3,11:14:10.08:466,10,0	1/1:3,20:23:63.20:826,63,0	0/0:21,0:21:51.07:0,51,528	1/1:3,18:21:60.19:777,60,0	1/1:6,21:27:78.25:1023,78,0	1/1:1,22:23:51.17:670,51,0	0/0:23,0:23:66.16:0,66,709	0/0:19,0:19:45.07:0,45,482	0/0:24,0:24:57.11:0,57,596	1/1:7,17:24:63.20:821,63,0	1/1:4,17:21:63.20:814,63,0	1/1:5,20:25:72.18:912,72,0	1/1:2,6:8:18.06:237,18,0
chr10	77785484	.	G	GA	9052.23	PASS	AB=0.531;AC=33;AF=0.589;AN=56;BaseQRankSum=2.896;DP=604;FS=1.438;HRun=9;HaplotypeScore=91.5406;InbreedingCoeff=0.9427;MQ=79.79;MQ0=0;MQRankSum=-10.223;QD=25.50;ReadPosRankSum=-2.434;VQSLOD=4.0664;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,885	0/0:14,0:14:38.99:0,39,339	0/0:21,0:20:32.91:0,33,279	0/0:18,0:18:32.87:0,33,274	1/1:2,16:18:39.06:416,39,0	1/1:8,10:18:33.08:358,33,0	1/1:5,20:25:40.21:640,40,0	1/1:6,15:22:53.96:564,54,0	0/0:20,0:20:56.98:0,57,495	1/1:6,20:26:66.18:727,66,0	1/1:2,12:14:10.20:324,10,0	0/0:28,0:28:80.97:0,81,700	0/0:24,0:24:62.98:0,63,547	1/1:3,19:22:34.10:600,34,0	1/1:2,22:24:63.17:695,63,0	0/1:2,14:17:1.14:428,0,1	1/1:6,16:23:47.98:503,48,0	0/0:26,0:26:71.97:0,72,625	1/1:2,20:22:37.23:618,37,0	1/1:2,27:29:84.18:908,84,0	1/1:10,9:19:21.04:223,21,0	0/0:22,0:22:44.19:0,44,372	0/0:25,0:25:71.97:0,72,625	0/0:16,0:16:41.99:0,42,365	1/1:6,16:22:48.13:531,48,0	1/1:2,20:22:57.15:630,57,0	1/1:5,24:28:72.19:789,72,0	1/1:0,3:3:9.02:99,9,0
chr10	77786893	.	G	GCTGCCTTCT	1725.57	PASS	AB=0.732;AC=20;AF=0.909;AN=22;BaseQRankSum=-2.165;DP=40;FS=2.944;HRun=0;HaplotypeScore=18.1771;InbreedingCoeff=-0.2079;MQ=139.30;MQ0=0;MQRankSum=-1.010;QD=53.92;ReadPosRankSum=-1.491;VQSLOD=2.7705;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:4,1:6:3.26:437,0,3	0/1:3,0:5:8.28:441,0,8	1/1:1,0:1:3.01:69,3,0	./.	./.	1/1:4,0:4:9.03:171,9,0	./.	./.	./.	./.	./.	./.	1/1:3,0:3:3.01:71,3,0	1/1:1,0:1:3.01:71,3,0	./.	./.	1/1:1,0:1:3.01:53,3,0	./.	1/1:3,0:3:6.02:100,6,0	1/1:3,0:3:6.01:130,6,0	./.	./.	1/1:4,0:4:12.02:212,12,0	./.	1/1:1,0:1:3.01:50,3,0	./.
chr10	77789021	.	GGTGTGTGT	G	2915.37	PASS	AB=0.749;AC=37;AF=0.740;AN=50;BaseQRankSum=3.317;DP=538;FS=8.676;HRun=0;HaplotypeScore=131.2816;InbreedingCoeff=0.3688;MQ=64.58;MQ0=21;MQRankSum=-3.618;QD=7.92;ReadPosRankSum=-0.315;VQSLOD=1.2922;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:36.08:0,36,1011	1/1:4,0:4:3.01:56,3,0	./.	./.	1/1:18,2:19:11.99:195,12,0	1/1:15,0:19:4.99:110,5,0	1/1:17,4:22:12.04:279,12,0	0/0:15,0:15:0.89:0,1,2	0/1:15,1:16:11.09:135,0,11	1/1:23,0:21:0.17:0,0,0	1/1:12,2:14:5.93:91,6,0	1/1:16,0:22:8.66:57,9,0	1/1:14,0:18:8.81:88,9,0	1/1:11,0:13:6.02:105,6,0	1/1:17,4:23:14.26:268,14,0	1/1:9,5:15:18.06:428,18,0	0/1:17,8:26:26.33:375,0,26	0/0:12,0:15:12.51:0,13,303	0/0:13,0:12:0:0,0,0	1/1:11,3:14:3.01:71,3,0	1/1:25,0:21:3.88:26,4,0	0/1:2,1:9:4.77:107,0,5	0/0:13,0:13:5.78:0,6,31	1/1:14,0:22:5.65:35,6,0	1/1:10,0:10:9.85:85,10,0	1/1:15,1:18:12.02:209,12,0	1/1:22,6:29:15.05:335,15,0	./.
chr10	77789993	.	C	CT	2501.85	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=-0.054;DP=608;FS=4.709;HRun=3;HaplotypeScore=111.3880;InbreedingCoeff=0.9487;MQ=39.54;MQ0=51;MQRankSum=-0.055;QD=18.67;ReadPosRankSum=3.405;VQSLOD=3.3620;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:93.23:0,93,1074	0/0:9,0:8:18.02:0,18,190	./.	./.	0/0:18,0:17:33.07:0,33,378	0/0:19,0:18:45.14:0,45,536	0/0:16,0:12:18.05:0,18,215	0/0:25,0:24:60.14:0,60,698	1/1:1,27:27:54.18:754,54,0	0/0:27,0:25:69.19:0,69,799	0/0:10,0:9:15.04:0,15,170	1/1:2,30:26:42.14:585,42,0	1/1:1,27:24:36.12:503,36,0	0/0:34,0:34:69.18:0,69,801	0/0:22,0:22:42.02:0,42,460	0/0:19,0:19:45.14:0,45,538	0/0:24,0:23:54.13:0,54,627	0/0:20,0:20:48.14:0,48,565	0/0:21,0:16:45.10:0,45,523	0/0:27,0:19:45.13:0,45,526	0/0:6,0:5:6.02:0,6,72	1/1:2,17:17:30.10:419,30,0	1/1:3,16:17:24.08:335,24,0	1/1:2,6:7:6.02:84,6,0	0/0:28,0:23:39.12:0,39,466	0/0:29,0:26:66.17:0,66,758	0/0:23,0:23:51.09:0,51,591	0/0:15,0:10:21.06:0,21,252
chr10	77790634	.	CTT	C	10126.69	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=16.136;DP=575;FS=5.282;HRun=10;HaplotypeScore=126.4461;InbreedingCoeff=0.9073;MQ=63.41;MQ0=0;MQRankSum=-1.797;QD=26.10;ReadPosRankSum=1.811;VQSLOD=4.1381;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:36:95.81:0,96,1480	0/0:0,0:12:30.05:0,30,286	0/0:7,0:6:8.93:0,9,88	0/1:5,0:5:21.15:21,0,95	1/1:1,17:18:36.55:402,37,0	1/1:2,21:23:60.15:668,60,0	1/1:3,21:24:63.09:687,63,0	1/1:2,17:19:51.07:553,51,0	0/0:28,0:29:80.73:0,81,1181	1/1:4,15:19:42.10:468,42,0	1/1:1,19:20:54.14:602,54,0	0/0:23,0:25:74.50:0,75,1056	0/0:13,0:15:40.99:0,41,579	1/1:5,21:27:33.80:609,34,0	1/1:6,15:21:45.57:494,46,0	1/1:3,22:25:54.09:588,54,0	1/1:5,32:37:78.19:869,78,0	0/0:1,0:18:39.93:0,40,137	1/1:7,14:21:48.10:520,48,0	1/1:1,28:29:75.19:834,75,0	1/1:2,8:10:21.05:234,21,0	0/0:13,0:13:39.12:0,39,598	0/0:16,0:18:45.12:0,45,623	0/0:14,0:14:39.13:0,39,619	1/1:3,23:26:66.16:736,66,0	1/1:2,18:20:9.52:554,10,0	1/1:1,30:31:87.23:970,87,0	1/1:3,10:13:30.01:319,30,0
chr10	77792133	.	A	AAG	995.87	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=11.265;DP=619;FS=2.549;HRun=0;HaplotypeScore=130.7623;InbreedingCoeff=0.0716;MQ=61.33;MQ0=5;MQRankSum=-6.654;QD=6.38;ReadPosRankSum=-1.554;VQSLOD=3.3658;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:77.36:0,77,1182	0/1:9,0:9:28.05:53,0,28	0/0:28,0:18:42.04:0,42,483	0/0:23,0:17:36.41:0,36,419	0/0:25,0:25:42.72:0,43,733	0/0:30,0:30:74.26:0,74,857	0/0:25,0:25:16.40:0,16,465	0/0:30,0:30:81.13:0,81,842	0/1:17,0:17:62.98:63,0,73	0/0:34,0:34:73.20:0,73,885	0/0:17,0:17:44.57:0,45,551	0/1:24,0:24:64.10:64,0,178	0/1:17,0:17:36.96:91,0,37	0/0:20,0:20:53.78:0,54,632	0/0:21,0:21:60.09:0,60,716	0/0:17,0:17:30.57:0,31,495	0/0:24,0:24:71.83:0,72,773	1/1:18,4:22:51.10:651,51,0	0/0:22,0:22:59.72:0,60,589	0/0:13,0:13:39.04:0,39,444	0/0:24,0:24:18.29:0,18,556	0/1:18,0:18:65.60:69,0,66	0/1:21,0:21:77.84:78,0,99	0/1:28,0:28:74.79:75,0,125	0/0:23,0:23:60.13:0,60,738	0/0:21,0:21:63.07:0,63,753	0/0:20,0:20:56.97:0,57,658	0/0:8,0:8:23.97:0,24,263
chr10	77792134	.	A	AGTGTGT	7557	PASS	AB=0.990;AC=24;AF=0.429;AN=56;BaseQRankSum=-10.170;DP=640;FS=0.826;HRun=0;HaplotypeScore=168.3265;InbreedingCoeff=0.3530;MQ=60.52;MQ0=5;MQRankSum=-5.523;QD=21.35;ReadPosRankSum=-2.478;VQSLOD=3.9584;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:38:75.48:0,75,1394	1/1:6,4:10:21.05:576,21,0	0/0:27,0:17:9.03:0,9,135	0/0:24,0:18:8.63:0,9,142	0/0:25,0:25:1.34:0,1,614	0/1:30,0:30:26.02:26,0,761	0/1:23,0:23:77.09:77,0,341	0/0:31,0:31:6.19:0,6,124	1/1:13,5:18:33.11:865,33,0	0/1:33,0:33:1.59:2,0,608	0/1:17,0:17:28.74:29,0,500	1/1:19,6:26:41.23:1125,41,0	1/1:6,11:18:36.12:1067,36,0	0/0:20,0:20:38.72:0,39,544	0/1:22,0:22:31.51:32,0,555	0/1:17,0:17:24.24:24,0,346	0/0:24,0:24:20.14:0,20,557	1/1:22,0:25:5.37:959,5,0	0/0:22,0:22:6.14:0,6,252	0/1:14,0:14:16.93:17,0,367	0/1:22,0:24:96.56:97,0,342	1/1:7,13:23:30.10:894,30,0	1/1:20,4:25:38.85:1015,39,0	1/1:21,3:29:32.50:754,32,0	0/0:24,0:24:50.10:0,50,658	0/0:22,0:22:30.30:0,30,567	0/0:21,0:21:16.15:0,16,465	0/0:8,0:8:14.38:0,14,145
chr10	77792260	.	T	TA	15715.41	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=3.255;DP=617;FS=4.655;HRun=6;HaplotypeScore=86.7223;InbreedingCoeff=0.8612;MQ=71.55;MQ0=0;MQRankSum=1.576;QD=28.11;ReadPosRankSum=0.290;VQSLOD=5.2338;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,1170	1/1:1,8:9:20.98:243,21,0	0/0:15,0:13:7.77:0,8,58	0/1:9,0:6:0.38:0,0,15	1/1:3,20:23:54.52:610,55,0	1/1:1,18:19:48.15:584,48,0	1/1:0,9:9:24.07:293,24,0	1/1:4,33:37:99:1027,99,0	1/1:1,18:19:51.16:637,51,0	1/1:4,22:26:69.18:715,69,0	1/1:3,26:29:78.07:886,78,0	1/1:1,19:20:51.09:617,51,0	1/1:2,18:20:45.14:565,45,0	1/1:2,19:21:48.11:568,48,0	1/1:4,16:20:45.14:550,45,0	1/1:0,18:18:42.13:513,42,0	1/1:1,16:17:45.14:548,45,0	1/1:4,23:27:48.15:587,48,0	1/1:2,12:15:39.04:409,39,0	1/1:3,23:27:72.15:835,72,0	1/1:3,19:22:51.54:601,52,0	1/1:4,25:29:69.05:824,69,0	1/1:3,25:28:53.63:678,54,0	1/1:0,22:22:60.19:754,60,0	1/1:3,18:21:51.16:622,51,0	1/1:3,25:28:74.72:770,75,0	1/1:3,25:28:69.21:842,69,0	1/1:2,14:16:36.11:438,36,0
chr10	77792384	.	TG	T	7246.94	PASS	AB=0.837;AC=50;AF=0.893;AN=56;BaseQRankSum=-1.824;DP=543;FS=12.098;HRun=11;HaplotypeScore=60.8615;InbreedingCoeff=0.3072;MQ=72.34;MQ0=1;MQRankSum=-1.322;QD=13.67;ReadPosRankSum=4.032;VQSLOD=3.8168;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:35,3:38:7.81:8,0,503	1/1:2,2:4:5.99:49,6,0	0/0:13,0:12:16.80:0,17,137	0/1:10,0:10:9.70:10,0,84	1/1:7,17:25:49.97:400,50,0	1/1:1,9:10:20.97:172,21,0	1/1:4,23:27:56.93:468,57,0	1/1:12,16:28:41.83:338,42,0	1/1:3,9:12:20.97:172,21,0	1/1:5,6:11:14.97:123,15,0	0/1:9,6:15:8.03:148,0,8	1/1:6,17:23:53.93:443,54,0	1/1:6,11:17:29.81:246,30,0	1/1:7,19:26:50.90:418,51,0	1/1:5,12:17:29.96:246,30,0	1/1:5,18:23:44.94:369,45,0	1/1:3,20:23:56.93:468,57,0	0/1:7,4:12:11.96:109,0,12	1/1:8,5:15:28.03:209,28,0	1/1:6,12:18:32.93:270,33,0	1/1:12,14:25:13.94:270,14,0	1/1:7,20:27:50.93:419,51,0	1/1:6,10:16:35.83:286,36,0	1/1:8,16:25:43.97:351,44,0	1/1:4,17:22:43.99:351,44,0	1/1:9,15:24:47.88:387,48,0	1/1:7,19:26:41.92:345,42,0	1/1:1,9:10:20.97:172,21,0
chr10	77792691	.	GT	G	10212.31	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=12.230;DP=672;FS=7.906;HRun=9;HaplotypeScore=66.2031;InbreedingCoeff=0.9990;MQ=77.50;MQ0=0;MQRankSum=-1.336;QD=23.42;ReadPosRankSum=1.878;VQSLOD=5.7476;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:58.38:0,58,640	0/0:16,0:16:45.13:0,45,519	0/0:18,1:19:26.61:0,27,502	0/0:17,0:16:21.06:0,21,236	1/1:3,26:29:72.02:659,72,0	1/1:4,27:31:75.04:686,75,0	1/1:2,11:13:30.01:275,30,0	1/1:4,24:29:74.01:648,74,0	0/0:17,0:17:37.35:0,37,414	1/1:2,27:29:81.03:737,81,0	1/1:1,22:23:63.03:577,63,0	0/0:25,0:25:63.19:0,63,727	0/0:25,0:25:69.19:0,69,786	1/1:3,30:33:87.04:796,87,0	1/1:3,23:26:57.02:522,57,0	1/1:4,25:29:43.42:652,43,0	1/1:1,15:16:42.02:384,42,0	0/0:20,0:20:52.38:0,52,620	1/1:2,16:18:48.02:439,48,0	1/1:2,44:46:99:1180,129,0	1/1:1,11:12:27.01:247,27,0	0/0:31,0:31:87.26:0,87,1004	0/0:24,0:24:69.20:0,69,788	0/0:17,0:17:48.12:0,48,535	1/1:2,26:28:72.03:659,72,0	1/1:1,28:29:83.99:756,84,0	1/1:4,28:32:58.23:667,58,0	1/1:0,13:13:36.02:330,36,0
chr10	77793474	.	TG	T	340.19	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.225;DP=489;FS=11.469;HRun=1;HaplotypeScore=47.6068;InbreedingCoeff=0.9618;MQ=68.80;MQ0=0;MQRankSum=-1.253;QD=20.01;ReadPosRankSum=-1.387;VQSLOD=2.1421;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:67.24:0,67,1038	0/0:9,0:9:27.09:0,27,423	0/0:6,0:6:18.01:0,18,246	0/0:8,0:8:14.04:0,14,193	0/0:31,0:31:90.25:0,90,1335	0/0:14,0:14:39.05:0,39,558	0/0:13,0:13:39.13:0,39,618	0/0:34,0:34:83.60:0,84,1298	0/0:11,0:11:29.94:0,30,429	0/0:23,0:23:69.24:0,69,1096	0/0:28,0:28:84.27:0,84,1306	0/0:10,0:10:30.08:0,30,431	0/0:7,0:7:21.05:0,21,304	0/0:11,0:11:33.10:0,33,501	0/0:19,0:19:54.16:0,54,811	0/0:17,0:17:51.16:0,51,786	0/0:38,0:38:99:0,102,1509	1/1:0,17:17:33.08:435,33,0	0/0:24,0:24:69.21:0,69,1018	0/0:21,0:21:50.98:0,51,803	0/0:9,0:9:22.43:0,22,286	0/0:9,0:9:27.07:0,27,384	0/0:16,0:16:48.13:0,48,715	0/0:10,0:10:27.08:0,27,402	0/0:28,0:28:84.23:0,84,1218	0/0:17,0:17:48.61:0,49,713	0/0:21,0:21:63.19:0,63,950	0/0:13,0:13:39.12:0,39,594
chr10	77794832	.	C	CGTTCAACACT	1002.23	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.345;DP=704;FS=0.000;HRun=0;HaplotypeScore=201.4285;InbreedingCoeff=0.9946;MQ=84.52;MQ0=0;MQRankSum=-4.488;QD=83.52;ReadPosRankSum=-0.781;VQSLOD=3.2873;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.27:0,78,2446	0/0:9,0:9:27.09:0,27,864	0/0:23,0:23:60.21:0,60,1775	0/0:20,0:20:51.17:0,51,1543	0/0:32,0:32:96.33:0,96,3087	0/0:31,0:31:90.29:0,90,2683	0/0:21,0:21:63.17:0,63,1989	0/0:36,0:36:96.31:0,96,2745	0/0:24,0:24:69.22:0,69,2181	0/0:24,0:24:69.20:0,69,2166	0/0:26,0:26:78.27:0,78,2544	0/0:20,0:20:60.21:0,60,1972	0/0:40,0:40:99:0,117,3622	0/0:26,0:26:75.26:0,75,2456	0/0:40,0:40:99:0,114,3665	0/0:26,0:26:78.27:0,78,2588	0/0:15,0:15:39.11:0,39,1099	1/1:3,6:12:20.81:1094,21,0	0/0:19,0:19:57.17:0,57,1819	0/0:44,0:44:99:0,129,4079	0/0:20,0:20:51.18:0,51,1607	0/0:24,0:24:72.25:0,72,2224	0/0:19,0:19:54.19:0,54,1801	0/0:19,0:19:54.19:0,54,1658	0/0:26,0:26:78.22:0,78,2411	0/0:32,0:32:93.31:0,93,2900	0/0:35,0:35:99:0,105,3387	0/0:15,0:15:42.14:0,42,1329
chr10	77795603	.	CAA	C	8315.03	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.322;DP=528;FS=119.847;HRun=3;HaplotypeScore=68.4031;InbreedingCoeff=0.9992;MQ=88.26;MQ0=0;MQRankSum=-0.820;QD=42.42;ReadPosRankSum=4.978;VQSLOD=0.4113;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.26:0,75,1449	1/1:0,16:16:48.16:735,48,0	0/0:20,0:20:36.37:0,36,934	0/0:21,0:24:42.74:0,43,1041	0/0:22,0:22:66.23:0,66,1256	0/0:14,0:14:42.14:0,42,811	0/0:10,0:10:27.08:0,27,481	0/0:13,0:13:36.12:0,36,682	1/1:1,27:28:75.25:1148,75,0	0/0:13,0:13:39.13:0,39,754	0/0:10,0:10:30.10:0,30,579	1/1:3,33:36:99:1516,99,0	1/1:1,33:34:87.30:1332,87,0	0/0:9,0:9:27.09:0,27,522	0/0:9,0:9:27.09:0,27,499	0/0:14,0:14:42.14:0,42,812	0/0:17,0:17:51.17:0,51,985	0/0:18,0:18:54.18:0,54,1018	0/0:18,0:18:54.19:0,54,1033	0/0:21,0:21:63.22:0,63,1217	0/0:14,0:14:42.14:0,42,805	1/1:0,19:19:51.17:781,51,0	1/1:0,26:26:78.26:1194,78,0	1/1:0,37:37:99:1608,105,0	0/0:11,0:11:33.11:0,33,637	0/0:16,0:16:48.16:0,48,922	0/0:22,0:22:66.23:0,66,1268	0/0:12,0:12:36.12:0,36,696
chr10	77796583	.	TTTTCA	T	2870.33	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.209;DP=578;FS=1.785;HRun=0;HaplotypeScore=205.9683;InbreedingCoeff=0.9471;MQ=66.59;MQ0=13;MQRankSum=-4.939;QD=25.63;ReadPosRankSum=0.541;VQSLOD=3.0168;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:53.87:0,54,651	0/0:11,0:10:13.25:0,13,197	0/0:40,0:22:12.40:0,12,256	0/0:47,0:13:23.08:0,23,262	0/0:18,0:18:40.63:0,41,280	0/0:18,0:17:34.09:0,34,310	0/0:14,0:14:3.01:0,3,187	0/0:33,0:33:84.01:0,84,750	1/1:19,2:21:56.81:596,57,0	0/0:29,0:29:77.72:0,78,642	0/0:18,0:17:39.61:0,40,327	1/1:23,3:26:74.85:788,75,0	1/1:13,5:18:50.80:549,51,0	0/0:12,0:12:14.79:0,15,221	0/0:26,0:25:57.82:0,58,544	0/0:15,0:14:38.67:0,39,284	0/0:21,0:21:25.80:0,26,349	0/0:10,0:10:15.45:0,15,152	0/0:19,0:19:50.92:0,51,435	0/0:19,0:19:49.90:0,50,366	0/0:14,0:14:38.71:0,39,292	1/1:18,2:20:59.74:600,60,0	1/1:9,3:12:26.99:287,27,0	1/1:14,1:15:23.58:237,24,0	0/0:20,0:19:53.12:0,53,385	0/0:18,0:18:53.74:0,54,431	0/0:20,0:20:27.29:0,27,370	0/0:9,0:8:23.78:0,24,171
chr10	77796588	.	A	ATTTCT	170.22	PASS	AB=0.930;AC=19;AF=0.365;AN=52;BaseQRankSum=-5.893;DP=560;FS=1.966;HRun=0;HaplotypeScore=211.7802;InbreedingCoeff=0.2886;MQ=64.63;MQ0=21;MQRankSum=0.163;QD=0.69;ReadPosRankSum=0.738;VQSLOD=2.7548;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,17:35:17.69:235,0,18	0/1:9,0:8:3.08:11,0,3	0/1:41,0:20:0:0,0,0	./.	0/0:15,0:15:1.70:0,2,5	0/0:17,0:16:3.83:0,4,12	0/0:11,0:11:3:0,3,28	./.	0/0:19,0:19:15.39:0,15,129	1/1:27,0:27:1.89:3,2,0	0/0:17,0:16:0.71:0,1,3	0/0:25,0:25:18.40:0,18,162	0/0:17,0:17:16.60:0,17,169	0/0:12,0:12:1.25:0,1,29	0/1:26,0:25:1.62:3,0,2	1/1:14,0:13:0.47:1,0,0	0/0:20,0:20:3.86:0,4,42	0/0:10,0:10:3.01:0,3,33	1/1:19,0:19:2.71:7,3,0	1/1:17,0:17:0.20:0,0,0	1/1:13,0:13:0.89:2,1,0	0/0:19,0:19:14.43:0,14,110	0/0:9,0:9:2.67:0,3,58	0/0:14,0:14:8.95:0,9,76	0/1:20,0:19:0.18:0,0,2	1/1:17,0:17:0.47:1,0,0	0/0:19,0:19:4.46:0,4,67	1/1:10,0:8:0.47:1,0,0
chr10	77796607	.	CT	C	1441.61	PASS	AB=0.885;AC=15;AF=0.268;AN=56;BaseQRankSum=9.903;DP=532;FS=0.000;HRun=4;HaplotypeScore=222.0309;InbreedingCoeff=0.1651;MQ=50.55;MQ0=28;MQRankSum=-7.323;QD=6.67;ReadPosRankSum=3.414;VQSLOD=0.0114;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:63.15:0,63,787	0/0:7,0:6:17.83:0,18,188	0/1:32,0:11:10.11:10,0,92	0/0:50,0:9:5.28:0,5,137	0/1:16,0:16:10.27:10,0,244	0/0:13,0:12:19.25:0,19,319	0/0:14,0:13:26.58:0,27,314	0/0:22,0:16:36.07:0,36,446	0/1:15,8:23:52.87:244,0,53	0/0:23,0:23:47.18:0,47,820	0/0:17,0:16:25.37:0,25,444	0/1:10,12:22:31.55:373,0,32	1/1:14,8:22:14.01:315,14,0	0/1:11,0:11:9.24:9,0,117	0/0:24,0:23:24.64:0,25,618	0/0:13,0:12:35.88:0,36,384	0/0:23,1:23:10.89:0,11,545	1/1:4,4:8:7.03:122,7,0	0/0:12,0:10:30.06:0,30,393	0/1:20,0:20:14.51:15,0,316	0/0:12,0:12:30.03:0,30,381	1/1:8,11:18:31.30:332,31,0	0/1:10,3:13:55.31:112,0,55	0/1:9,4:13:19.03:61,0,19	0/0:17,0:16:18.92:0,19,488	0/1:17,0:17:5.95:6,0,464	0/0:19,0:19:35.65:0,36,596	0/0:12,0:10:26.63:0,27,345
chr10	77796617	.	CT	C	4144.73	PASS	AB=0.748;AC=28;AF=0.500;AN=56;BaseQRankSum=4.707;DP=525;FS=0.366;HRun=4;HaplotypeScore=208.9966;InbreedingCoeff=-0.8520;MQ=44.02;MQ0=25;MQRankSum=-4.149;QD=8.49;ReadPosRankSum=6.315;VQSLOD=0.0238;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:59.89:0,60,754	0/1:4,1:5:10.03:39,0,10	0/1:16,0:4:3.85:18,0,4	0/1:35,0:5:14.27:14,0,36	0/1:11,4:18:98.05:98,0,209	0/1:7,5:13:99:166,0,166	0/1:12,5:16:86.77:87,0,244	0/1:19,3:15:99:159,0,169	0/1:17,10:27:99:141,0,132	0/1:12,10:22:99:278,0,218	0/1:11,6:17:99:179,0,206	0/1:10,12:22:19.75:228,0,20	0/1:15,12:27:67.67:177,0,68	0/1:5,3:9:58.34:58,0,173	0/1:17,7:24:99:302,0,243	0/1:10,7:16:99:143,0,230	0/1:14,9:22:99:227,0,262	0/1:7,3:10:66.51:71,0,67	0/1:6,5:9:78.02:117,0,78	0/1:17,4:22:99:125,0,335	0/1:7,3:10:74.04:176,0,74	1/1:6,12:17:2.42:186,2,0	0/1:8,6:14:62.71:63,0,68	0/1:7,5:12:43.73:44,0,45	0/1:8,8:17:99:278,0,146	0/1:17,6:23:99:271,0,295	0/1:11,8:21:99:281,0,113	0/1:6,6:10:52.01:220,0,52
chr10	77796618	.	T	TTTC	7916.75	PASS	AB=0.985;AC=28;AF=0.500;AN=56;BaseQRankSum=1.173;DP=521;FS=0.000;HRun=0;HaplotypeScore=214.2998;InbreedingCoeff=-0.8539;MQ=42.64;MQ0=22;MQRankSum=-2.333;QD=16.36;ReadPosRankSum=5.115;VQSLOD=4.1710;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:51.17:0,51,842	0/1:4,0:4:21.14:54,0,21	0/1:12,0:3:4.20:16,0,4	0/1:33,0:4:10.92:11,0,37	0/1:18,0:18:99:275,0,237	0/1:13,1:13:99:346,0,225	0/1:18,0:17:99:191,0,307	0/1:22,0:15:99:159,0,196	0/1:27,0:27:99:239,0,160	0/1:21,0:21:99:554,0,272	0/1:18,0:17:99:362,0,239	0/1:22,0:22:28.64:355,0,29	0/1:27,0:27:94.16:316,0,94	0/1:9,0:9:99:162,0,221	0/1:24,1:24:99:550,0,327	0/1:17,0:16:99:318,0,265	0/1:24,1:24:99:503,0,304	0/1:10,0:10:40.76:121,0,41	0/1:11,0:9:88.52:275,0,89	0/1:21,1:22:99:270,0,424	0/1:9,1:10:86.28:315,0,86	1/1:18,0:17:3.13:305,3,0	0/1:16,0:16:92.65:100,0,93	0/1:12,0:12:35.25:40,0,35	0/1:18,0:17:99:617,0,181	0/1:21,1:23:99:539,0,352	0/1:20,0:20:99:583,0,172	0/1:11,0:10:71.45:339,0,71
chr10	77796627	.	CT	C	4237.10	PASS	AB=0.741;AC=30;AF=0.556;AN=54;BaseQRankSum=15.483;DP=487;FS=19.542;HRun=4;HaplotypeScore=210.2862;InbreedingCoeff=-0.3803;MQ=43.13;MQ0=14;MQRankSum=-9.349;QD=10.57;ReadPosRankSum=1.989;VQSLOD=1.4247;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:63.11:0,63,788	1/1:2,3:5:7.21:75,7,0	0/0:6,0:3:0.47:0,0,1	./.	0/1:20,2:22:20.59:21,0,432	0/1:11,6:16:99:139,0,287	0/1:15,4:18:25.91:26,0,415	0/0:26,0:18:51.10:0,51,641	1/1:2,24:28:45.56:626,46,0	0/1:8,9:17:99:200,0,236	0/1:11,4:14:66.65:67,0,275	1/1:0,18:21:61.19:498,61,0	1/1:2,20:27:73.43:593,73,0	0/1:8,2:10:17.64:18,0,225	0/1:15,7:21:99:121,0,364	0/1:12,6:17:95.21:95,0,394	0/1:16,9:24:99:108,0,359	0/1:7,4:11:80.83:93,0,81	0/1:4,5:8:87.71:88,0,102	0/1:18,3:21:71.70:72,0,446	0/1:4,3:7:36.15:36,0,110	1/1:0,15:16:43.55:328,44,0	1/1:0,14:17:47.36:364,47,0	0/1:0,11:12:5.21:149,0,5	0/1:10,6:15:99:141,0,208	0/1:13,7:20:99:152,0,417	0/1:11,7:18:99:165,0,245	0/1:4,3:7:62.55:63,0,88
chr10	77796637	.	CT	C	3451.71	PASS	AB=1.000;AC=17;AF=0.315;AN=54;BaseQRankSum=11.440;DP=479;FS=6.169;HRun=4;HaplotypeScore=216.8615;InbreedingCoeff=0.9498;MQ=42.69;MQ0=10;MQRankSum=-8.869;QD=24.31;ReadPosRankSum=2.097;VQSLOD=1.5585;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:52.55:0,53,667	1/1:0,6:6:17.78:169,18,0	./.	0/1:2,0:1:0:0,0,0	0/0:21,0:21:39.03:0,39,432	0/0:18,0:17:18.37:0,18,242	0/0:21,0:20:17.93:0,18,358	0/0:30,0:24:33.46:0,33,379	1/1:5,25:29:83.08:751,83,0	0/0:22,0:21:41.09:0,41,338	0/0:15,0:15:24.01:0,24,248	1/1:6,17:23:41.33:550,41,0	1/1:6,19:25:71.05:623,71,0	0/0:11,0:11:21.83:0,22,237	0/0:23,0:23:38.65:0,39,385	0/0:19,0:18:39.58:0,40,320	0/0:26,0:25:13.42:0,13,304	1/1:4,7:11:19.05:238,19,0	0/0:13,0:12:22.47:0,22,155	0/0:21,0:21:38.59:0,39,396	0/0:6,0:6:12.49:0,12,115	1/1:3,12:14:38.94:348,39,0	1/1:3,13:16:46.48:389,46,0	1/1:1,13:14:39.06:382,39,0	0/0:13,0:13:13.92:0,14,177	0/0:16,0:16:36.53:0,37,324	0/0:19,0:19:21.56:0,22,256	0/0:7,0:7:14.99:0,15,129
chr10	77796642	.	C	CT	2968.91	PASS	AB=0.969;AC=34;AF=0.630;AN=54;BaseQRankSum=-7.972;DP=497;FS=1.288;HRun=4;HaplotypeScore=215.6938;InbreedingCoeff=0.7009;MQ=44.80;MQ0=10;MQRankSum=5.569;QD=8.39;ReadPosRankSum=0.365;VQSLOD=0.0963;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:34,1:35:1.86:2,0,389	0/0:6,0:6:17.18:0,17,134	./.	0/1:2,0:1:0:0,0,0	1/1:25,0:25:43.70:288,44,0	1/1:16,1:17:25.64:197,26,0	1/1:20,2:21:6.17:234,6,0	0/1:30,2:26:99:208,0,241	0/0:29,0:28:75.22:0,75,493	1/1:26,0:24:36.15:230,36,0	1/1:15,1:16:24.06:191,24,0	0/0:23,0:23:55.25:0,55,406	0/0:24,0:24:64.84:0,65,422	1/1:12,0:12:13.63:129,14,0	1/1:23,0:23:44.51:261,45,0	1/1:17,1:17:38.95:258,39,0	0/1:26,1:26:14.54:192,0,15	0/0:12,0:12:22.61:0,23,260	1/1:14,0:14:2.60:44,3,0	1/1:21,0:21:41.59:264,42,0	1/1:6,0:6:12.71:78,13,0	0/0:17,0:16:42.53:0,43,318	0/0:16,0:16:40.02:0,40,238	0/0:15,0:15:41.51:0,42,353	1/1:13,0:13:15.95:118,16,0	1/1:19,1:20:35.19:251,35,0	1/1:19,0:19:6.28:145,6,0	1/1:6,0:6:12.30:76,12,0
chr10	77796655	.	TTTCTTTC	T	3532.26	PASS	AB=0.964;AC=25;AF=0.446;AN=56;BaseQRankSum=-1.347;DP=527;FS=4.237;HRun=0;HaplotypeScore=221.9321;InbreedingCoeff=0.3447;MQ=51.95;MQ0=10;MQRankSum=3.626;QD=10.58;ReadPosRankSum=2.901;VQSLOD=2.6138;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:53.95:0,54,1502	0/0:7,0:7:21.04:0,21,447	0/0:6,0:2:5.99:0,6,49	0/0:8,0:6:12.85:0,13,107	1/1:27,3:30:20.41:420,20,0	0/1:17,2:19:3.70:177,0,4	0/1:25,0:23:86.26:101,0,86	0/1:35,0:33:99:208,0,383	0/0:30,0:29:77.35:0,77,966	0/1:28,0:26:11.35:321,0,11	1/1:19,1:20:11.19:283,11,0	0/0:20,0:20:41.50:0,42,592	0/0:24,0:24:47.64:0,48,669	0/1:12,1:13:10.68:230,0,11	1/1:21,1:22:0.90:204,1,0	1/1:17,0:16:22.89:165,23,0	0/1:24,0:23:78.28:96,0,78	0/0:16,0:14:19.71:0,20,332	0/1:17,0:17:68.40:214,0,68	1/1:23,1:24:54.36:400,54,0	0/1:6,0:6:5.46:33,0,5	0/0:19,0:18:38.26:0,38,496	0/0:16,0:16:31.21:0,31,442	0/0:17,0:17:39.69:0,40,538	0/1:9,2:11:7.61:113,0,8	1/1:19,0:19:13.39:204,13,0	1/1:17,2:18:34.61:301,35,0	1/1:5,0:5:11.50:60,12,0
chr10	77796659	.	TTTC	T	9870.09	PASS	AB=0.654;AC=33;AF=0.589;AN=56;BaseQRankSum=-7.149;DP=550;FS=0.746;HRun=0;HaplotypeScore=166.3846;InbreedingCoeff=0.8816;MQ=53.71;MQ0=10;MQRankSum=4.260;QD=28.12;ReadPosRankSum=1.315;VQSLOD=5.1865;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:62.14:0,62,975	0/0:7,0:7:21.04:0,21,284	0/0:7,0:3:8.99:0,9,74	0/0:8,0:6:12.35:0,12,84	1/1:6,24:30:76.57:1011,77,0	1/1:6,16:22:13.43:468,13,0	1/1:10,15:23:5.14:528,5,0	0/1:16,18:32:43.34:600,0,43	0/0:31,0:30:78.38:0,78,487	1/1:2,26:26:68.53:909,69,0	1/1:4,19:23:35.45:679,35,0	0/0:20,1:21:24.73:0,25,274	0/0:25,0:25:52.60:0,53,337	1/1:7,7:14:39.05:552,39,0	1/1:2,21:23:20.38:650,20,0	1/1:3,17:19:39.91:630,40,0	1/1:4,22:25:21.56:491,22,0	0/0:14,0:12:21.35:0,21,159	1/1:1,17:18:23.37:467,23,0	1/1:2,23:25:59.23:905,59,0	1/1:0,7:7:11.99:172,12,0	0/0:22,0:21:41.84:0,42,245	0/0:17,0:17:34.72:0,35,222	0/0:17,0:17:40.97:0,41,286	1/1:3,10:13:22.48:319,22,0	1/1:2,17:19:53.36:700,53,0	1/1:3,16:18:35.91:586,36,0	1/1:0,5:5:12.04:204,12,0
chr10	77796660	.	TTC	T	5209.80	PASS	AB=0.985;AC=34;AF=0.607;AN=56;BaseQRankSum=-3.648;DP=554;FS=1.594;HRun=0;HaplotypeScore=174.1101;InbreedingCoeff=0.7808;MQ=55.75;MQ0=10;MQRankSum=4.354;QD=14.31;ReadPosRankSum=1.306;VQSLOD=4.9534;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:62.43:0,62,850	0/0:7,0:7:21.04:0,21,277	0/0:7,0:3:9.02:0,9,91	0/0:10,0:8:15.70:0,16,121	1/1:30,1:31:71.09:528,71,0	1/1:20,2:22:5.57:273,6,0	1/1:23,2:23:2.32:362,2,0	0/1:31,1:30:89.79:294,0,90	0/0:31,0:30:81.85:0,82,386	1/1:28,0:26:63.37:423,63,0	1/1:23,0:23:25.47:300,25,0	0/0:21,0:21:25.84:0,26,188	0/0:27,0:27:53.30:0,53,246	1/1:14,0:14:36.94:274,37,0	1/1:23,0:23:14.36:343,14,0	1/1:20,0:19:41.55:363,42,0	1/1:25,1:25:21.73:310,22,0	0/1:14,0:12:23.17:23,0,108	1/1:18,0:18:13.04:189,13,0	1/1:25,0:25:51.32:440,51,0	1/1:7,0:7:11.96:102,12,0	0/0:22,0:21:37.76:0,38,186	0/0:17,0:17:33.97:0,34,165	0/0:17,0:17:42.06:0,42,233	1/1:13,0:13:18:165,18,0	1/1:18,1:19:51.54:403,52,0	1/1:18,1:18:35.06:309,35,0	1/1:5,0:5:12.01:111,12,0
chr10	77797089	.	G	GA	116.81	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.843;DP=664;FS=4.094;HRun=4;HaplotypeScore=64.0476;InbreedingCoeff=0.9837;MQ=90.54;MQ0=0;MQRankSum=-2.021;QD=19.47;ReadPosRankSum=-0.130;VQSLOD=3.0297;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,1487	1/1:0,6:6:15.05:205,15,0	0/0:28,0:28:75.19:0,75,832	0/0:25,0:25:57.06:0,57,607	0/0:43,0:43:99:0,120,1351	0/0:21,0:21:57.16:0,57,646	0/0:31,0:31:90.26:0,90,1021	0/0:24,0:24:72.20:0,72,809	0/0:17,0:17:45.11:0,45,500	0/0:28,0:28:78.22:0,78,884	0/0:18,0:18:51.15:0,51,579	0/0:24,0:24:72.17:0,72,796	0/0:18,0:18:54.15:0,54,612	0/0:30,0:30:84.24:0,84,953	0/0:21,0:21:51.13:0,51,569	0/0:14,0:14:36.10:0,36,408	0/0:21,0:21:63.16:0,63,703	0/0:15,0:15:45.13:0,45,510	0/0:24,0:24:63.17:0,63,707	0/0:23,0:23:66.17:0,66,739	0/0:33,0:33:93.25:0,93,1043	0/0:24,0:24:69.20:0,69,783	0/0:20,0:20:60.17:0,60,681	0/0:21,0:21:60.17:0,60,680	0/0:12,0:12:36.10:0,36,408	0/0:27,0:27:75.21:0,75,851	0/0:23,0:23:69.18:0,69,773	0/0:26,0:26:57.15:0,57,646
chr10	77797260	.	ATT	A	440.01	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.069;DP=728;FS=7.842;HRun=3;HaplotypeScore=82.1986;InbreedingCoeff=0.9930;MQ=85.86;MQ0=0;MQRankSum=-2.269;QD=27.50;ReadPosRankSum=0.406;VQSLOD=2.0737;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,2019	0/0:14,0:14:42.14:0,42,811	0/0:27,0:27:54.48:0,54,1263	0/0:21,0:21:48.15:0,48,888	0/0:26,0:26:78.26:0,78,1475	0/0:18,0:18:54.19:0,54,1037	0/0:34,0:34:99:0,99,1908	0/0:38,0:38:99:0,111,2099	0/0:24,0:24:72.25:0,72,1387	0/0:31,0:31:90.30:0,90,1709	0/0:29,0:29:87.30:0,87,1671	0/0:20,0:20:57.20:0,57,1101	0/0:30,0:30:90.31:0,90,1720	0/0:29,0:29:81.28:0,81,1551	0/0:34,0:34:99:0,102,1940	0/0:15,0:15:45.15:0,45,870	0/0:30,0:30:90.31:0,90,1715	1/1:2,14:16:18.74:531,19,0	0/0:29,0:29:87.29:0,87,1631	0/0:36,0:36:99:0,105,1980	0/0:40,0:40:99:0,120,2278	0/0:22,0:22:63.22:0,63,1217	0/0:25,0:25:72.25:0,72,1391	0/0:22,0:22:66.23:0,66,1275	0/0:24,0:24:72.25:0,72,1391	0/0:21,0:21:63.22:0,63,1212	0/0:24,0:24:69.21:0,69,1265	0/0:14,0:14:42.14:0,42,793
chr10	77797412	.	A	AT	20776.59	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-9.272;DP=702;FS=12.057;HRun=6;HaplotypeScore=64.1566;InbreedingCoeff=0.9990;MQ=72.51;MQ0=0;MQRankSum=-4.380;QD=32.41;ReadPosRankSum=4.274;VQSLOD=4.2564;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:66.14:0,66,673	1/1:2,10:12:27.09:340,27,0	0/0:13,0:13:27.02:0,27,258	0/0:19,0:17:41.51:0,42,367	1/1:3,39:42:99:1414,114,0	1/1:2,30:32:81.26:1019,81,0	1/1:1,11:12:30.10:377,30,0	1/1:5,32:37:93.28:1157,93,0	1/1:1,24:25:72.23:906,72,0	1/1:3,29:32:87.24:1064,87,0	1/1:4,23:27:63.20:790,63,0	1/1:3,15:18:45.14:566,45,0	1/1:2,21:23:57.01:716,57,0	1/1:2,28:30:84.27:1056,84,0	1/1:2,27:29:78.25:981,78,0	1/1:4,20:24:51.16:642,51,0	1/1:3,15:18:42.13:528,42,0	1/1:5,20:25:63.18:777,63,0	1/1:5,21:26:63.20:792,63,0	1/1:1,31:32:93.29:1163,93,0	1/1:2,18:20:48.15:604,48,0	1/1:5,23:28:69.21:849,69,0	1/1:2,18:20:51.16:641,51,0	1/1:3,16:20:51.03:619,51,0	1/1:0,27:27:72.23:906,72,0	1/1:0,38:38:99:1434,114,0	1/1:4,23:27:66.21:830,66,0	1/1:0,17:17:48.15:604,48,0
chr10	77798635	.	CTTTTT	C	5946.67	PASS	AB=0.827;AC=34;AF=0.607;AN=56;BaseQRankSum=10.515;DP=547;FS=6.253;HRun=18;HaplotypeScore=144.5829;InbreedingCoeff=0.5418;MQ=64.45;MQ0=0;MQRankSum=-10.421;QD=14.54;ReadPosRankSum=7.228;VQSLOD=0.1423;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:48.63:0,49,1108	0/0:11,0:11:24.08:0,24,612	0/0:20,0:15:26.75:0,27,402	0/1:10,0:10:7.78:8,0,148	1/1:11,19:33:22.76:544,23,0	1/1:11,18:29:34.51:760,35,0	1/1:8,11:19:2.77:309,3,0	0/1:24,6:30:86.92:169,0,87	0/0:16,0:17:29.87:0,30,535	1/1:9,11:20:7.45:368,7,0	1/1:6,17:23:33.87:551,34,0	0/1:11,1:15:4.82:5,0,401	0/0:12,0:16:42.01:0,42,554	1/1:13,6:19:11.90:213,12,0	1/1:9,11:21:34.92:506,35,0	1/1:8,9:17:29.53:409,30,0	1/1:7,11:19:0.59:198,1,0	0/1:18,0:18:0.55:9,0,1	0/1:13,7:21:40.48:238,0,40	1/1:9,8:18:22.92:313,23,0	1/1:6,0:7:2.52:28,3,0	0/0:12,0:19:40.39:0,40,351	0/0:14,0:20:41.44:0,41,536	0/0:10,0:11:27.04:0,27,342	1/1:13,14:28:30.40:447,30,0	1/1:10,7:17:16.88:236,17,0	0/1:17,12:29:1.13:506,0,1	1/1:8,6:14:8.71:130,9,0
chr10	77801246	.	GAC	G	640.08	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.503;DP=870;FS=0.000;HRun=0;HaplotypeScore=101.3333;InbreedingCoeff=0.9999;MQ=87.29;MQ0=0;MQRankSum=-2.705;QD=33.69;ReadPosRankSum=1.289;VQSLOD=5.8508;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,163,3109	1/1:0,19:19:48.16:735,48,0	0/0:33,0:33:96.27:0,96,1697	0/0:28,0:28:84.29:0,84,1592	0/0:17,0:17:51.17:0,51,967	0/0:21,0:21:63.20:0,63,1183	0/0:23,0:22:69.20:0,69,1258	0/0:32,0:32:87.30:0,87,1664	0/0:32,0:32:96.33:0,96,1828	0/0:45,0:45:99:0,135,2546	0/0:21,0:21:63.22:0,63,1217	0/0:41,0:41:99:0,123,2369	0/0:26,0:26:75.24:0,75,1411	0/0:36,0:36:99:0,99,1911	0/0:45,0:45:99:0,132,2516	0/0:25,0:25:75.22:0,75,1348	0/0:36,0:36:99:0,108,2073	0/0:39,0:39:99:0,114,2141	0/0:25,0:25:66.18:0,66,1237	0/0:22,0:22:60.19:0,60,1126	0/0:44,0:44:99:0,126,2360	0/0:22,0:22:63.19:0,63,1149	0/0:25,0:25:75.26:0,75,1427	0/0:44,0:44:99:0,132,2548	0/0:27,0:27:81.28:0,81,1565	0/0:38,0:38:99:0,114,2138	0/0:37,0:36:99:0,111,2123	0/0:13,0:13:39.13:0,39,753
chr10	77803005	.	TTCTCTCTCTC	T	618.64	PASS	AB=1.000;AC=10;AF=0.217;AN=46;BaseQRankSum=0.456;DP=445;FS=9.446;HRun=0;HaplotypeScore=114.3809;InbreedingCoeff=0.3023;MQ=50.41;MQ0=42;MQRankSum=1.572;QD=5.33;ReadPosRankSum=1.020;VQSLOD=1.6914;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:9.47:0,9,123	0/0:8,0:8:9.02:0,9,109	0/0:10,0:2:0:0,0,0	./.	0/0:19,0:19:3.01:0,3,72	0/0:8,0:7:6.01:0,6,62	0/0:22,0:21:9:0,9,159	0/0:27,0:23:3.46:0,3,25	./.	0/0:17,0:17:24.52:0,25,523	0/0:16,0:16:9.03:0,9,275	1/1:12,1:12:3.01:88,3,0	1/1:13,0:11:7.19:262,7,0	0/0:25,0:24:20.25:0,20,592	0/1:16,0:16:1.53:2,0,152	0/0:16,0:16:10.76:0,11,215	0/1:9,0:7:2.39:2,0,78	0/1:13,0:12:8.27:8,0,95	0/0:17,0:15:3.01:0,3,102	0/0:14,0:13:6.91:0,7,179	0/1:27,0:24:63.90:64,0,475	./.	./.	1/1:24,0:17:11.97:316,12,0	0/0:11,0:11:6.02:0,6,151	0/0:25,0:24:35.95:0,36,1104	0/0:14,0:12:21.07:0,21,753	./.
chr10	77803052	.	TCACA	T	168.64	PASS	AB=0.955;AC=8;AF=0.154;AN=52;BaseQRankSum=-0.884;DP=475;FS=0.000;HRun=0;HaplotypeScore=93.9094;InbreedingCoeff=0.3565;MQ=37.35;MQ0=62;MQRankSum=-0.025;QD=2.03;ReadPosRankSum=-0.355;VQSLOD=0.9869;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:18:8.94:0,9,139	1/1:9,0:7:6.02:74,6,0	./.	./.	0/0:13,0:13:5.56:0,6,116	0/0:20,0:17:6.02:0,6,99	0/0:29,0:22:9.05:0,9,96	0/0:17,0:13:1.25:0,1,3	0/0:16,0:15:6.02:0,6,94	0/0:19,0:17:5.98:0,6,57	0/0:5,0:4:0:0,0,0	0/0:22,0:19:12.03:0,12,161	0/0:14,0:11:9.03:0,9,134	1/1:17,0:17:2.61:42,3,0	0/0:20,0:17:7.85:0,8,89	0/0:19,0:19:9.03:0,9,150	0/0:21,0:13:8.96:0,9,115	0/1:20,0:15:14.62:36,0,15	0/0:8,0:6:8.76:0,9,99	0/0:15,0:14:6.01:0,6,100	0/0:40,0:35:14.03:0,14,98	0/0:13,0:11:8.72:0,9,123	0/0:11,0:10:6.02:0,6,91	0/0:26,0:15:9.03:0,9,122	0/0:24,0:23:15.03:0,15,246	1/1:22,4:22:5.91:75,6,0	0/0:17,0:14:5.75:0,6,52	0/1:9,0:7:8.08:66,0,8
chr10	77804460	.	ATGGCTGGGAAT	A	562.10	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.215;DP=796;FS=0.000;HRun=0;HaplotypeScore=243.7382;InbreedingCoeff=0.9897;MQ=77.88;MQ0=0;MQRankSum=-3.074;QD=62.46;ReadPosRankSum=1.266;VQSLOD=3.1429;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:69,0:69:99:0,205,10631	0/0:9,0:9:24.08:0,24,1383	0/0:23,0:24:56.17:0,56,3187	0/0:26,0:26:75.24:0,75,3482	0/0:25,0:25:72.02:0,72,3619	0/0:27,0:27:75.26:0,75,4101	0/0:38,0:38:99:0,111,6050	0/0:41,0:41:99:0,117,5989	0/0:32,0:32:90.29:0,90,4969	0/0:26,0:26:78.25:0,78,4125	0/0:14,0:14:42.14:0,42,2342	0/0:30,0:29:81.26:0,81,4341	0/0:28,0:28:78.25:0,78,4295	0/0:20,0:20:51.16:0,51,2630	0/0:46,0:46:99:0,132,7215	0/0:34,0:34:99:0,99,5111	0/0:34,0:34:99:0,102,5419	1/1:0,9:9:18.06:653,18,0	0/0:22,0:22:60.17:0,60,2701	0/0:24,0:24:72.22:0,72,3761	0/0:40,0:40:99:0,114,6158	0/0:29,0:29:81.28:0,81,4098	0/0:22,0:22:66.23:0,66,3779	0/0:34,0:34:99:0,102,5547	0/0:21,0:21:63.22:0,63,3669	0/0:31,0:31:93.31:0,93,4806	0/0:29,0:29:84.29:0,84,4427	0/0:12,0:12:33.07:0,33,1439
chr10	77804648	.	TCACACACACA	T	3739.99	PASS	AB=0.918;AC=28;AF=0.560;AN=50;BaseQRankSum=8.002;DP=635;FS=37.625;HRun=0;HaplotypeScore=237.7212;InbreedingCoeff=0.3399;MQ=37.38;MQ0=50;MQRankSum=-6.674;QD=8.90;ReadPosRankSum=-4.302;VQSLOD=0.4442;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:19:32.61:0,33,1056	0/0:9,0:8:18.05:0,18,532	./.	./.	1/1:23,4:30:0.47:1,0,0	1/1:20,0:21:9.02:119,9,0	1/1:19,2:22:6.39:102,6,0	0/0:30,0:22:3.01:0,3,40	0/1:25,0:23:48.06:95,0,48	0/1:18,0:16:81.31:417,0,81	0/0:17,5:24:2.48:0,2,16	0/1:26,0:27:99:227,0,184	0/1:27,0:24:99:203,0,202	1/1:19,4:25:1.99:72,2,0	1/1:37,2:41:2.86:72,3,0	1/1:26,3:29:15.01:297,15,0	1/1:16,0:14:6.02:142,6,0	0/0:9,0:5:6.02:0,6,174	1/1:13,0:14:12.04:276,12,0	1/1:20,1:24:3.95:44,4,0	./.	0/0:23,0:24:14.72:0,15,132	0/0:26,0:27:14.97:0,15,225	0/0:30,0:30:2.75:0,3,71	0/1:18,3:18:0:0,0,0	1/1:17,3:22:41.75:1030,42,0	0/1:26,2:26:0.77:339,0,1	1/1:5,2:5:12.04:305,12,0
chr10	77804668	.	ACACACACACACACACACTCTCTCT	A	6314.82	PASS	AB=0.923;AC=24;AF=0.429;AN=56;BaseQRankSum=8.178;DP=665;FS=62.373;HRun=0;HaplotypeScore=291.8487;InbreedingCoeff=-0.3086;MQ=37.97;MQ0=55;MQRankSum=-6.937;QD=11.91;ReadPosRankSum=2.485;VQSLOD=1.5862;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:23:51.18:0,51,3703	0/0:8,0:7:18.06:0,18,1273	0/0:9,0:1:3.01:0,3,37	0/0:13,0:1:0.47:0,0,1	0/1:29,0:27:11.46:11,0,51	0/1:14,11:23:4.21:313,0,4	0/1:13,10:22:28.43:130,0,28	0/1:33,0:24:99:424,0,132	0/1:24,0:22:62.72:63,0,289	0/1:27,0:22:99:698,0,259	0/1:24,0:23:75.14:126,0,75	0/1:32,0:30:99:496,0,903	0/1:29,0:26:99:256,0,736	1/1:28,0:27:4.82:172,5,0	1/1:24,14:37:6.92:218,7,0	0/1:15,14:27:26.93:321,0,27	0/1:6,10:14:27.23:397,0,27	0/1:11,0:7:49.66:50,0,298	0/1:13,0:12:99:594,0,103	0/1:25,0:25:3.29:3,0,10	0/1:21,0:18:0:0,0,0	0/0:24,0:23:18.66:0,19,576	0/0:26,0:26:15.05:0,15,600	0/0:26,0:25:3.01:0,3,145	1/1:11,16:23:3.48:71,3,0	0/1:33,0:29:84.25:962,0,84	0/1:32,0:30:99:857,0,130	0/1:9,0:6:4.44:153,0,4
chr10	77804670	.	ACACACACACACACACTCTCTCTCT	A	7413.72	PASS	AB=0.970;AC=27;AF=0.482;AN=56;BaseQRankSum=8.870;DP=651;FS=37.560;HRun=0;HaplotypeScore=281.7797;InbreedingCoeff=-0.1053;MQ=39.34;MQ0=55;MQRankSum=-5.818;QD=14.45;ReadPosRankSum=2.121;VQSLOD=2.1881;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:24:51.18:0,51,3663	0/0:8,0:7:18.06:0,18,1222	0/0:10,0:1:3.01:0,3,51	0/0:16,0:2:0.47:0,0,1	0/1:29,0:27:12.82:14,0,13	0/1:21,0:21:15.21:277,0,15	1/1:20,0:19:13.85:152,14,0	0/1:27,0:18:99:281,0,240	0/1:24,0:22:99:108,0,196	0/1:27,0:22:99:932,0,165	0/1:24,0:23:36.26:164,0,36	0/1:33,0:31:99:664,0,690	0/1:29,0:26:99:382,0,568	1/1:28,0:27:8.12:224,8,0	1/1:29,0:31:4.84:182,5,0	0/1:26,0:26:2.26:310,0,2	0/1:16,0:14:8.98:347,0,9	0/1:11,0:7:85.14:85,0,261	0/1:14,0:13:52.48:751,0,52	1/1:26,1:25:4.83:30,5,0	0/1:21,0:18:0:0,0,0	0/0:23,0:22:15.80:0,16,413	0/0:26,0:26:15.05:0,15,481	0/0:24,0:23:3.01:0,3,120	1/1:27,0:23:3.48:53,3,0	0/1:33,0:29:1.88:1250,0,2	0/1:13,20:31:88.88:984,0,89	1/1:9,0:6:10.57:222,11,0
chr10	77804672	.	ACACACACACACACTCTCTCTCT	A	8616.59	PASS	AB=0.941;AC=30;AF=0.536;AN=56;BaseQRankSum=8.077;DP=651;FS=48.751;HRun=0;HaplotypeScore=265.0083;InbreedingCoeff=0.0226;MQ=39.37;MQ0=53;MQRankSum=-6.673;QD=17.06;ReadPosRankSum=2.512;VQSLOD=2.1930;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:25:54.19:0,54,3423	0/0:8,0:7:18.06:0,18,1068	0/0:14,0:1:3.01:0,3,51	0/0:20,0:2:0:0,0,0	1/1:16,11:26:2.93:20,3,0	0/1:21,0:20:14.42:244,0,14	1/1:19,0:18:13.28:183,13,0	0/1:26,0:18:99:334,0,199	0/1:23,0:21:99:179,0,107	0/1:26,1:22:99:1108,0,103	0/1:13,10:22:12.51:164,0,13	0/1:34,0:32:99:806,0,459	0/1:29,0:26:99:558,0,407	1/1:13,15:27:7.92:284,8,0	1/1:31,0:31:4.37:163,4,0	1/1:26,0:26:9.70:347,10,0	0/1:15,0:13:5.87:318,0,6	0/1:11,0:7:99:107,0,217	0/1:7,7:13:31.82:765,0,32	1/1:29,0:27:7.39:54,7,0	0/1:19,0:16:0:0,0,0	0/0:22,0:21:16.21:0,16,260	0/0:26,0:26:15.02:0,15,347	0/0:25,0:24:2.83:0,3,95	1/1:25,0:23:3.01:53,3,0	1/1:19,14:29:37.70:1580,38,0	0/1:31,1:30:61.65:995,0,62	1/1:6,3:6:12.04:354,12,0
chr10	77804674	.	ACACACACACACTCTCTCTCT	A	9126.78	PASS	AB=0.966;AC=31;AF=0.554;AN=56;BaseQRankSum=7.863;DP=643;FS=43.507;HRun=0;HaplotypeScore=247.0394;InbreedingCoeff=0.0805;MQ=40.88;MQ0=53;MQRankSum=-6.342;QD=18.70;ReadPosRankSum=2.507;VQSLOD=2.6326;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:26:57.16:0,57,3189	0/0:8,0:7:18.05:0,18,913	0/0:16,0:2:3.01:0,3,51	0/0:25,0:4:5.97:0,6,171	1/1:25,0:24:2.97:20,3,0	0/1:21,0:20:13.46:227,0,13	1/1:18,0:17:10.35:156,10,0	0/1:28,0:20:99:436,0,172	0/1:23,0:21:46.27:277,0,46	0/1:12,13:20:67.20:1149,0,67	0/1:22,0:21:7.82:164,0,8	0/1:34,0:32:99:966,0,210	0/1:29,0:27:99:752,0,219	1/1:25,2:26:8.98:267,9,0	1/1:30,0:29:3.90:145,4,0	1/1:25,0:26:12.22:363,12,0	1/1:13,0:11:7.27:291,7,0	0/1:11,0:7:99:129,0,178	0/1:13,0:12:13.45:753,0,13	1/1:13,14:25:4.42:44,4,0	0/1:18,0:15:0:0,0,0	0/0:21,1:21:12.76:0,13,125	0/0:26,0:26:14.97:0,15,226	0/0:26,0:25:3.01:0,3,72	1/1:26,0:22:3.01:52,3,0	1/1:31,0:27:53.67:1584,54,0	0/1:30,1:29:50.15:954,0,50	1/1:9,0:6:12.04:395,12,0
chr10	77804678	.	ACACACACTCTCTCTCTCT	A	8243.09	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=8.697;DP=638;FS=13.503;HRun=0;HaplotypeScore=230.1422;InbreedingCoeff=0.2041;MQ=41.86;MQ0=57;MQRankSum=-4.613;QD=16.72;ReadPosRankSum=2.382;VQSLOD=2.1107;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:24:54.13:0,54,2964	0/0:8,0:7:16.61:0,17,828	0/0:22,0:3:8.24:0,8,237	0/0:31,0:8:13.91:0,14,404	1/1:24,0:23:2.04:6,2,0	0/1:20,0:19:36.83:135,0,37	1/1:16,0:15:7.44:69,7,0	0/1:30,0:21:99:284,0,342	1/1:18,5:21:15.69:483,16,0	0/1:22,0:17:45.53:868,0,46	1/1:21,0:20:6.20:138,6,0	1/1:26,7:32:31.12:1416,31,0	1/1:11,19:28:17.18:1171,17,0	1/1:26,0:25:6.74:192,7,0	0/1:29,0:28:10.59:105,0,11	1/1:26,0:25:6.11:193,6,0	0/1:13,0:11:6:206,0,6	0/1:12,0:7:99:131,0,106	0/1:13,0:12:9.77:542,0,10	1/1:26,0:24:2.70:42,3,0	0/1:15,0:12:0:0,0,0	1/1:15,5:19:5.48:53,5,0	0/0:10,17:26:9.12:0,9,45	0/0:8,18:25:2.83:0,3,24	1/1:25,0:21:2.67:33,3,0	1/1:29,1:26:36.63:1154,37,0	0/1:29,0:27:66.78:749,0,67	1/1:9,0:6:12.04:275,12,0
chr10	77804680	.	ACACACTCTCTCTCTCT	A	7436.12	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=8.598;DP=645;FS=6.907;HRun=0;HaplotypeScore=223.1038;InbreedingCoeff=0.1902;MQ=41.82;MQ0=59;MQRankSum=-1.877;QD=14.75;ReadPosRankSum=1.500;VQSLOD=2.8001;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:24:48.28:0,48,2656	0/0:7,0:6:15.05:0,15,716	0/0:27,0:4:11.25:0,11,415	0/0:35,0:8:13.90:0,14,404	1/1:24,0:23:2.04:6,2,0	0/1:20,0:19:36.83:103,0,37	1/1:16,0:15:7.45:52,7,0	0/1:31,0:22:99:297,0,340	1/1:22,1:21:16.47:446,16,0	0/1:22,0:17:23.35:744,0,23	1/1:20,0:19:6.10:138,6,0	1/1:32,2:32:34.43:1366,34,0	1/1:29,1:28:40.62:1133,41,0	1/1:26,0:25:6.65:174,7,0	0/1:29,0:28:10.55:88,0,11	1/1:26,0:25:5.96:142,6,0	0/1:13,0:11:6:171,0,6	0/1:12,0:7:65.76:131,0,66	0/1:13,0:12:7.58:472,0,8	1/1:26,0:24:2.69:26,3,0	0/0:16,0:13:0:0,0,0	1/1:18,0:18:12.50:154,13,0	1/1:27,0:26:3.75:9,4,0	0/0:25,1:25:2.70:0,3,18	1/1:25,0:21:2.66:33,3,0	1/1:30,0:26:36.93:891,37,0	0/1:29,0:27:66.78:661,0,67	1/1:9,0:6:12.02:200,12,0
chr10	77804684	.	ACTCTCTCT	A	4790.84	PASS	AB=0.876;AC=38;AF=0.704;AN=54;BaseQRankSum=7.349;DP=668;FS=26.345;HRun=0;HaplotypeScore=200.4330;InbreedingCoeff=0.3750;MQ=45.01;MQ0=57;MQRankSum=-5.411;QD=9.64;ReadPosRankSum=2.820;VQSLOD=2.5090;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:26:54.14:0,54,1676	0/0:7,0:6:11.78:0,12,262	0/0:35,0:5:9.03:0,9,285	0/0:45,0:15:17.73:0,18,399	1/1:23,0:23:2.96:20,3,0	1/1:19,0:19:2.19:100,2,0	1/1:16,0:15:4.26:81,4,0	0/1:20,15:26:38.95:869,0,39	1/1:19,0:21:8.70:166,9,0	1/1:21,0:17:27.55:546,28,0	1/1:20,0:19:5.97:138,6,0	1/1:27,0:32:30.06:581,30,0	1/1:30,0:28:24.19:482,24,0	1/1:26,0:25:5.03:125,5,0	1/1:27,1:28:5.32:86,5,0	1/1:25,0:25:1.66:63,2,0	1/1:14,0:12:9:154,9,0	1/1:10,0:7:3.55:106,4,0	1/1:12,0:11:18.04:324,18,0	0/0:26,0:24:0.79:0,1,1	0/1:10,0:15:0:0,0,0	0/1:16,0:18:0:0,0,0	./.	0/1:25,0:24:0:0,0,0	1/1:24,0:21:2.85:70,3,0	1/1:29,1:26:23.60:425,24,0	0/1:29,0:27:16.75:408,0,17	0/1:10,0:8:47.19:47,0,98
chr10	77805323	.	A	AGTGTGT	3128	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=-1.019;DP=807;FS=8.425;HRun=0;HaplotypeScore=188.4717;InbreedingCoeff=0.8064;MQ=66.27;MQ0=2;MQRankSum=-8.676;QD=11.59;ReadPosRankSum=-1.768;VQSLOD=1.7915;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:45:76.28:0,76,1330	0/0:13,0:15:30.10:0,30,520	1/1:19,0:15:2.04:6,2,0	0/1:35,0:28:2.96:3,0,114	0/0:30,0:32:69.11:0,69,1305	0/0:26,0:29:29.52:0,30,877	0/0:27,0:27:42:0,42,815	0/1:31,0:32:4.48:4,0,479	1/1:15,11:32:18.06:586,18,0	0/0:30,0:34:50.44:0,50,867	0/0:19,0:19:42.09:0,42,690	1/1:11,14:30:21.07:683,21,0	1/1:9,18:31:34:958,34,0	0/0:30,0:31:66.21:0,66,1236	0/0:49,0:49:99:0,102,1860	0/0:26,0:28:45.11:0,45,802	0/0:27,0:30:62.02:0,62,1135	0/0:31,0:32:48.12:0,48,890	0/0:14,0:14:9.01:0,9,148	0/0:30,0:30:45.87:0,46,733	0/0:30,0:29:44.95:0,45,916	1/1:17,14:36:17.49:526,17,0	1/1:11,7:23:18.06:408,18,0	1/1:14,16:32:6.46:137,6,0	0/0:22,0:24:46.04:0,46,902	0/0:22,0:23:48.02:0,48,840	0/0:22,0:24:20.64:0,21,724	0/0:19,0:20:36.12:0,36,723
chr10	77805969	.	A	AT	8564.80	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-15.195;DP=617;FS=3.333;HRun=10;HaplotypeScore=65.5864;InbreedingCoeff=0.9699;MQ=80.88;MQ0=0;MQRankSum=-0.393;QD=23.40;ReadPosRankSum=-0.022;VQSLOD=5.6453;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,998	0/0:8,0:8:17.35:0,17,131	0/0:25,0:25:30.26:0,30,253	0/0:15,0:16:18.93:0,19,126	1/1:4,26:30:53.46:748,53,0	1/1:1,14:15:42.11:448,42,0	1/1:4,10:14:5.54:263,6,0	1/1:6,22:28:66.10:670,66,0	0/0:21,0:21:50.91:0,51,416	1/1:5,16:21:24.93:421,25,0	1/1:2,10:12:29.99:305,30,0	0/0:27,0:27:71.83:0,72,578	0/0:31,0:31:74.74:0,75,597	1/1:5,20:26:53.97:558,54,0	1/1:3,25:28:22.95:655,23,0	1/1:5,19:24:32.50:551,32,0	1/1:4,19:23:7.87:495,8,0	0/0:18,0:18:50.89:0,51,410	1/1:3,14:17:25.51:403,26,0	1/1:4,22:26:63.13:659,63,0	1/1:3,14:18:41.94:430,42,0	0/0:17,0:17:41.86:0,42,335	0/0:17,0:17:41.94:0,42,345	0/0:27,0:27:65.90:0,66,539	1/1:1,17:18:39.10:416,39,0	1/1:3,19:22:57.11:592,57,0	1/1:7,25:31:52.20:600,52,0	1/1:0,12:12:33.08:352,33,0
chr10	77806949	.	TACACACACACACACACACACACACACACACACACACAC	T	11347.02	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.686;DP=576;FS=8.770;HRun=0;HaplotypeScore=465.9422;InbreedingCoeff=0.9582;MQ=66.73;MQ0=2;MQRankSum=-8.452;QD=122.01;ReadPosRankSum=6.785;VQSLOD=2.4894;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:48.12:0,48,5701	0/0:3,0:7:8.30:0,8,998	0/0:28,0:18:32.85:0,33,909	0/0:22,0:15:36.10:0,36,2055	0/0:19,0:26:41.86:0,42,3145	0/0:9,0:19:33.11:0,33,3119	0/0:15,0:22:42.11:0,42,3340	0/0:30,0:30:66.20:0,66,3662	1/1:3,7:10:9.03:873,9,0	0/0:7,0:13:36.12:0,36,3811	0/0:6,0:19:36.11:0,36,3563	1/1:1,18:19:18.06:1746,18,0	1/1:7,10:17:38.98:2970,39,0	0/0:12,0:14:27.08:0,27,2460	0/0:14,0:24:63.18:0,63,4975	0/0:18,0:31:78.27:0,78,7166	0/0:18,0:24:36.12:0,36,3107	0/0:13,0:21:45.15:0,45,3758	0/0:18,0:18:39.13:0,39,3031	0/0:13,0:22:42.14:0,42,4059	0/0:23,0:28:32.32:0,32,2137	1/1:4,18:22:27.09:2619,27,0	1/1:2,15:17:25.33:2266,25,0	1/1:1,7:8:9.03:873,9,0	0/0:7,0:17:33.11:0,33,2850	0/0:13,0:24:66.23:0,66,7019	0/0:20,0:30:60.21:0,60,5654	0/0:13,0:13:18.06:0,18,1786
chr10	77807226	.	C	CT	2566.84	PASS	AB=0.810;AC=18;AF=0.321;AN=56;BaseQRankSum=-3.128;DP=508;FS=20.052;HRun=10;HaplotypeScore=89.3695;InbreedingCoeff=0.7014;MQ=80.07;MQ0=0;MQRankSum=1.158;QD=13.73;ReadPosRankSum=1.951;VQSLOD=2.1772;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,1:21:24.95:0,25,411	1/1:0,1:4:11.53:75,12,0	0/1:16,1:17:29.68:30,0,136	0/0:17,0:17:32.39:0,32,237	0/0:24,0:24:54.24:0,54,427	0/0:21,0:21:46.16:0,46,370	0/0:13,1:14:6.93:0,7,258	0/0:27,0:27:52.85:0,53,412	0/1:3,9:14:0.54:199,0,1	0/0:22,0:22:55.60:0,56,432	0/0:14,0:14:34.93:0,35,267	1/1:1,13:15:23.89:238,24,0	1/1:3,9:12:26.86:269,27,0	0/0:17,0:17:46.91:0,47,365	0/0:18,0:18:40.91:0,41,316	0/0:19,0:19:20.92:0,21,355	0/0:33,0:33:77.81:0,78,632	1/1:5,21:28:56.88:573,57,0	0/1:15,2:17:3.97:4,0,160	0/0:16,0:16:30.87:0,31,249	0/0:12,0:12:23.92:0,24,192	1/1:5,16:22:30.83:445,31,0	1/1:1,18:20:50.96:525,51,0	1/1:0,14:14:36.09:384,36,0	0/0:16,1:17:6.92:0,7,258	0/0:21,0:21:41.91:0,42,343	0/1:19,3:23:23.13:23,0,221	0/0:7,0:7:14.98:0,15,123
chr10	77808467	.	T	TTAA	947.93	PASS	AB=0.923;AC=17;AF=0.405;AN=42;BaseQRankSum=-0.371;DP=234;FS=18.070;HRun=0;HaplotypeScore=39.9495;InbreedingCoeff=0.5062;MQ=57.33;MQ0=1;MQRankSum=-2.250;QD=12.64;ReadPosRankSum=-2.108;VQSLOD=1.0420;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:8:3.88:0,4,57	0/0:2,0:2:2.98:0,3,21	./.	./.	0/0:8,0:8:6.02:0,6,79	0/0:15,0:15:21.05:0,21,261	./.	0/0:32,0:28:3.92:0,4,35	1/1:1,0:2:3.01:39,3,0	1/1:4,3:8:12.02:188,12,0	1/1:5,1:6:3.01:57,3,0	1/1:6,0:6:6.02:90,6,0	0/1:11,0:12:27.28:105,0,27	0/0:2,0:2:3.01:0,3,39	0/0:9,0:9:12.03:0,12,143	0/0:7,0:7:2.74:0,3,12	0/0:15,0:15:15.05:0,15,197	1/1:10,8:18:18.06:344,18,0	1/1:10,0:10:3.01:50,3,0	1/1:7,0:7:3.01:49,3,0	1/1:1,5:6:9.03:172,9,0	./.	./.	./.	0/0:7,0:7:12.04:0,12,157	./.	0/0:10,0:10:5.99:0,6,61	0/0:5,0:10:5.95:0,6,42
chr10	77810032	.	TAGACCCTTATCCCTTTCCTTA	T	10074.83	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.069;DP=774;FS=0.479;HRun=0;HaplotypeScore=450.3924;InbreedingCoeff=0.9931;MQ=80.56;MQ0=0;MQRankSum=-12.279;QD=86.11;ReadPosRankSum=4.412;VQSLOD=3.5630;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,123,10401	0/0:9,0:9:27.09:0,27,1566	0/0:23,0:23:66.22:0,66,3312	0/0:22,0:22:45.84:0,46,2966	0/0:35,0:35:99:0,99,7525	0/0:26,0:26:69.21:0,69,5232	0/0:37,0:37:99:0,102,7155	0/0:32,0:32:93.29:0,93,6358	0/0:30,0:30:84.29:0,84,7207	0/0:24,0:24:72.23:0,72,5520	0/0:20,0:20:57.18:0,57,4781	1/1:4,19:23:45.15:2609,45,0	1/1:6,32:38:72.25:4087,72,0	0/0:34,0:34:99:0,99,8331	0/0:47,0:47:99:0,123,9890	0/0:31,0:31:84.27:0,84,6652	0/0:33,0:33:90.26:0,90,6560	0/0:35,0:35:99:0,105,8573	0/0:26,0:26:72.69:0,73,4296	0/0:20,0:20:54.17:0,54,4533	0/0:39,0:39:99:0,114,8730	1/1:0,19:19:33.05:1623,33,0	1/1:3,11:14:21.07:1114,21,0	1/1:1,22:23:18.02:643,18,0	0/0:22,0:22:63.20:0,63,4690	0/0:35,0:35:90.31:0,90,6264	0/0:26,0:26:78.24:0,78,6484	0/0:5,0:5:15:0,15,630
chr10	77812425	.	C	CGTGTGTGTGT	10250.46	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=3.420;DP=621;FS=2.556;HRun=0;HaplotypeScore=254.1615;InbreedingCoeff=0.5548;MQ=61.28;MQ0=13;MQRankSum=-4.862;QD=18.54;ReadPosRankSum=-1.475;VQSLOD=3.2331;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:66.13:0,66,1673	1/1:11,0:10:9.03:227,9,0	0/1:39,0:20:13.11:13,0,249	0/0:36,0:22:18.50:0,18,353	1/1:26,0:22:1.97:23,2,0	1/1:30,0:29:17.69:502,18,0	1/1:29,0:29:27.20:492,27,0	1/1:38,0:36:33.09:901,33,0	1/1:11,0:11:6.02:188,6,0	1/1:13,0:13:11.09:392,11,0	1/1:19,0:19:11.46:292,11,0	1/1:14,7:21:9.03:262,9,0	1/1:15,0:15:18.53:438,19,0	1/1:29,0:28:23.87:606,24,0	1/1:22,0:22:10.45:259,10,0	1/1:23,0:23:20.44:496,20,0	1/1:20,1:20:24.05:586,24,0	1/1:11,0:11:15.01:437,15,0	1/1:24,0:24:45.11:1263,45,0	1/1:23,0:23:11.87:279,12,0	0/1:10,0:10:0.09:0,0,0	0/1:17,0:17:0:0,0,0	0/1:18,0:18:0.06:0,0,1	1/1:13,0:13:3.48:87,3,0	1/1:25,0:25:17.69:372,18,0	1/1:15,8:21:33.11:942,33,0	1/1:27,0:26:39.03:952,39,0	1/1:14,0:14:12.01:241,12,0
chr10	77812445	.	TGAGAGA	T	1298.56	PASS	AB=0.849;AC=32;AF=0.640;AN=50;BaseQRankSum=3.399;DP=532;FS=1.110;HRun=0;HaplotypeScore=212.5520;InbreedingCoeff=0.3268;MQ=41.91;MQ0=17;MQRankSum=-3.099;QD=3.68;ReadPosRankSum=-1.223;VQSLOD=2.3713;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:41:29.02:0,29,1052	0/0:9,0:10:3.17:0,3,7	./.	0/0:22,0:10:0:0,0,0	0/1:18,1:22:0:0,0,0	0/1:21,2:24:0:0,0,0	1/1:19,1:25:6.96:96,7,0	./.	./.	0/1:11,0:17:3.90:214,0,4	0/1:10,0:16:0:0,0,0	1/1:17,0:18:6.02:75,6,0	0/1:12,0:13:12.64:75,0,13	0/0:19,1:26:8.71:0,9,90	1/1:12,4:19:11.99:138,12,0	1/1:13,1:21:6.10:67,6,0	1/1:14,0:18:3.01:42,3,0	0/1:10,0:11:32.45:32,0,103	1/1:16,1:18:6.02:114,6,0	1/1:12,2:19:2.94:38,3,0	1/1:7,1:9:0.47:1,0,0	0/1:10,1:12:0:0,0,0	0/1:13,0:13:0.10:0,0,0	0/0:11,0:11:0:0,0,0	1/1:11,6:19:11.80:197,12,0	1/1:16,0:15:7.99:47,8,0	1/1:18,4:22:9.03:146,9,0	1/1:9,0:10:7.51:137,8,0
chr10	77813207	.	ATCTCTCTCTC	A	475.45	PASS	AB=0.918;AC=14;AF=0.318;AN=44;BaseQRankSum=2.458;DP=561;FS=15.016;HRun=0;HaplotypeScore=158.4399;InbreedingCoeff=0.1228;MQ=72.04;MQ0=10;MQRankSum=-0.173;QD=2.70;ReadPosRankSum=1.311;VQSLOD=2.2292;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:6.02:0,6,185	1/1:7,0:7:3.01:61,3,0	./.	./.	0/0:19,0:18:3.01:0,3,50	0/1:17,0:17:31.81:32,0,146	0/1:25,0:25:20.68:21,0,238	0/0:33,0:33:5.26:0,5,28	0/1:12,0:18:0:0,0,0	0/0:17,0:17:11.87:0,12,305	0/0:10,0:10:6.01:0,6,71	0/0:15,6:22:0.47:0,0,1	1/1:14,0:18:4.88:162,5,0	0/1:23,0:23:99:163,0,102	0/0:20,0:21:16.52:0,17,335	0/0:25,0:25:11.94:0,12,353	0/0:25,0:23:32.69:0,33,781	0/0:15,0:14:13.60:0,14,369	0/0:23,0:22:3.01:0,3,32	./.	0/0:17,0:17:5.80:0,6,41	1/1:9,1:14:0.47:1,0,0	./.	./.	./.	0/1:15,0:22:52.97:89,0,53	0/1:26,0:24:25.73:26,0,147	1/1:6,0:6:3.01:45,3,0
chr10	77813258	.	T	TCACACA	1522.03	PASS	AB=1.000;AC=17;AF=0.315;AN=54;BaseQRankSum=5.407;DP=575;FS=31.124;HRun=0;HaplotypeScore=130.0565;InbreedingCoeff=0.2220;MQ=48.37;MQ0=32;MQRankSum=0.200;QD=6.42;ReadPosRankSum=-2.422;VQSLOD=0.6939;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:34:17.96:0,18,259	0/1:10,0:8:14.88:62,0,15	./.	0/0:8,0:2:2.93:0,3,32	0/1:13,0:12:3.92:115,0,4	0/0:18,0:17:39.13:0,39,777	0/0:25,0:25:22.15:0,22,736	0/0:23,0:19:18.53:0,19,348	0/0:23,0:22:29.80:0,30,611	1/1:22,0:19:8.47:318,8,0	1/1:8,0:7:11.99:101,12,0	0/1:28,0:27:32.13:32,0,237	0/0:25,0:25:46.71:0,47,440	0/1:28,0:27:7.36:78,0,7	0/0:25,0:25:33.10:0,33,624	0/0:27,0:26:42.12:0,42,770	0/0:29,0:26:37.50:0,37,785	1/1:7,5:14:9.03:185,9,0	0/1:19,0:16:41.28:207,0,41	0/1:20,0:16:20.77:99,0,21	0/1:20,0:17:9.53:94,0,10	0/0:24,0:23:29.50:0,30,276	0/0:10,0:9:11.84:0,12,79	0/0:36,0:35:1.63:0,2,149	0/0:23,0:22:53.87:0,54,949	0/1:22,0:22:96.60:147,0,97	0/1:26,0:25:4.48:171,0,4	1/1:6,0:5:8.88:81,9,0
chr10	77816302	.	CG	C	4928.52	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.947;DP=795;FS=2.585;HRun=1;HaplotypeScore=76.0283;InbreedingCoeff=1.0000;MQ=87.45;MQ0=0;MQRankSum=-1.508;QD=36.24;ReadPosRankSum=4.009;VQSLOD=5.2946;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,163,2528	0/0:12,0:12:36.12:0,36,568	0/0:30,0:30:70.56:0,71,1209	0/0:28,0:28:78.09:0,78,1140	0/0:19,0:19:57.18:0,57,881	0/0:27,0:27:81.23:0,81,1258	0/0:34,0:34:99:0,102,1603	0/0:33,0:33:99:0,99,1545	0/0:25,0:25:75.24:0,75,1170	0/0:23,0:23:66.23:0,66,1053	0/0:20,0:20:60.19:0,60,924	1/1:0,29:29:75.25:1046,75,0	1/1:0,21:21:57.19:797,57,0	0/0:28,0:28:84.29:0,84,1340	0/0:36,0:36:99:0,108,1670	0/0:33,0:33:99:0,99,1503	0/0:38,0:38:99:0,114,1739	0/0:32,0:32:96.29:0,96,1495	0/0:26,0:26:75.24:0,75,1137	0/0:27,0:27:81.24:0,81,1242	0/0:46,0:46:99:0,138,2116	1/1:0,27:27:69.22:947,69,0	1/1:0,18:18:51.17:713,51,0	1/1:0,41:41:99:1425,102,0	0/0:19,0:19:57.16:0,57,883	0/0:26,0:26:72.25:0,72,1149	0/0:30,0:29:87.28:0,87,1354	0/0:13,0:13:39.13:0,39,619
chr10	77817998	.	T	TA	2623.57	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-4.604;DP=653;FS=5.843;HRun=9;HaplotypeScore=71.6631;InbreedingCoeff=0.9983;MQ=75.45;MQ0=0;MQRankSum=-0.313;QD=19.29;ReadPosRankSum=3.391;VQSLOD=4.2191;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:47.99:0,48,416	0/0:12,0:12:29.99:0,30,260	0/0:35,0:32:30.35:0,30,379	0/0:13,0:12:29.20:0,29,236	0/0:34,0:36:90.90:0,91,741	0/0:21,0:21:59.93:0,60,510	0/0:16,0:16:41.96:0,42,359	0/0:21,0:21:53.97:0,54,467	0/0:19,0:19:50.91:0,51,430	0/0:23,0:22:56.97:0,57,492	0/0:24,0:24:59.94:0,60,511	1/1:2,16:18:39.11:431,39,0	1/1:4,17:21:19.07:439,19,0	0/0:24,0:24:53.94:0,54,466	0/0:23,0:24:64.98:0,65,544	0/0:18,0:18:50.98:0,51,443	0/0:28,0:28:73.81:0,74,625	1/1:5,0:19:41.02:202,41,0	0/0:32,0:32:80.95:0,81,698	0/0:29,0:29:56.96:0,57,494	0/0:23,0:23:59.97:0,60,518	1/1:7,16:23:32.37:445,32,0	1/1:4,21:25:51.14:562,51,0	1/1:5,23:29:48.82:732,49,0	0/0:31,0:31:77.55:0,78,675	0/0:22,0:22:62.97:0,63,543	0/0:34,0:34:92.96:0,93,804	0/0:14,0:14:41.95:0,42,357
chr10	77818158	.	A	AAG	4170.44	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-12.097;DP=656;FS=0.429;HRun=0;HaplotypeScore=94.9108;InbreedingCoeff=0.9152;MQ=70.37;MQ0=3;MQRankSum=0.599;QD=29.58;ReadPosRankSum=0.997;VQSLOD=4.7677;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:51.16:0,51,614	0/0:13,0:13:33.10:0,33,398	0/0:26,0:17:0.28:0,0,133	0/0:23,0:17:6.04:0,6,144	0/0:31,0:33:59.85:0,60,679	0/0:18,0:18:48.14:0,48,569	0/0:24,0:24:41.57:0,42,493	0/0:40,0:40:69.20:0,69,832	0/0:15,0:15:39.12:0,39,470	0/0:34,0:34:54.14:0,54,638	0/0:24,0:24:33.15:0,33,517	1/1:5,13:18:39.13:627,39,0	1/1:8,19:29:48.16:770,48,0	0/0:27,0:27:57.17:0,57,688	0/0:24,0:24:66.20:0,66,787	0/0:21,0:20:54.17:0,54,651	0/0:18,0:19:47.95:0,48,533	1/1:0,21:20:48.16:763,48,0	0/0:14,0:14:18.04:0,18,206	0/0:34,0:34:81.22:0,81,944	0/0:21,0:22:41.95:0,42,474	1/1:7,18:27:45.15:723,45,0	1/1:6,18:26:41.88:649,42,0	1/1:5,15:20:8.96:639,9,0	0/0:15,0:15:39.12:0,39,470	0/0:22,0:22:54.16:0,54,652	0/0:34,0:33:78.22:0,78,920	0/0:10,0:10:18.06:0,18,217
chr10	77820812	.	AC	A	2118.94	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=3.967;DP=596;FS=6.562;HRun=1;HaplotypeScore=208.9813;InbreedingCoeff=0.9614;MQ=50.75;MQ0=5;MQRankSum=-6.969;QD=23.03;ReadPosRankSum=0.183;VQSLOD=3.0009;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1465	0/0:6,0:6:17.55:0,18,216	0/0:26,0:15:22.51:0,23,395	0/0:23,0:16:25.68:0,26,436	0/0:28,0:28:55.40:0,55,660	0/0:21,0:21:55.93:0,56,688	0/0:14,0:13:24.08:0,24,325	0/0:22,0:21:48.01:0,48,572	0/0:21,0:21:57.72:0,58,771	0/0:29,0:29:71.88:0,72,892	0/0:16,0:16:44.09:0,44,527	1/1:10,13:24:24.34:659,24,0	1/1:5,11:16:19.56:414,20,0	0/0:31,0:30:86.39:0,86,975	0/0:23,0:23:63.40:0,63,733	0/0:33,0:32:90.63:0,91,1136	0/0:28,0:28:73.26:0,73,800	0/0:13,0:13:33.99:0,34,318	0/0:18,0:17:30.52:0,31,510	0/0:27,0:27:74.36:0,74,829	0/0:6,0:6:12.03:0,12,163	1/1:10,10:20:36.25:476,36,0	1/1:7,13:20:22.79:495,23,0	1/1:6,5:10:16.73:248,17,0	0/0:24,0:24:57.17:0,57,750	0/0:27,0:27:77.57:0,78,976	0/0:27,0:27:76.27:0,76,894	0/0:4,0:4:6.15:0,6,19
chr10	77820818	.	A	AAC	6005.87	PASS	AB=0.867;AC=26;AF=0.464;AN=56;BaseQRankSum=6.423;DP=610;FS=7.829;HRun=0;HaplotypeScore=208.1917;InbreedingCoeff=-0.3371;MQ=47.94;MQ0=6;MQRankSum=-9.348;QD=12.64;ReadPosRankSum=-4.897;VQSLOD=2.2412;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1546	0/1:7,1:8:96.36:96,0,167	0/0:29,0:15:41.40:0,41,561	0/0:27,0:20:38.07:0,38,503	0/1:27,0:27:97.36:97,0,324	0/1:19,3:22:99:191,0,329	0/0:15,0:14:20.10:0,20,277	0/1:19,4:22:35.20:35,0,422	0/1:21,0:21:99:106,0,500	0/1:24,5:29:99:310,0,536	0/1:15,4:19:99:200,0,244	0/1:18,5:23:54.04:609,0,54	1/1:12,4:16:26.76:488,27,0	0/1:23,7:29:99:310,0,502	0/1:20,3:23:99:216,0,303	0/1:30,4:33:99:222,0,628	0/1:18,8:26:99:324,0,480	0/1:9,4:13:94.94:217,0,95	0/1:22,0:21:99:191,0,507	0/1:21,7:28:99:446,0,301	0/0:4,0:4:9.03:0,9,138	0/1:13,7:19:6.48:495,0,6	1/1:17,4:21:40.34:507,40,0	1/1:7,4:10:6.46:222,6,0	0/0:23,0:23:1.30:0,1,285	0/1:28,0:28:99:202,0,411	0/1:21,6:27:99:357,0,475	1/1:1,3:4:9.03:163,9,0
chr10	77820822	.	A	AAACAACAACAAC	42082.61	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=-3.281;DP=642;FS=2.753;HRun=0;HaplotypeScore=214.8898;InbreedingCoeff=0.9667;MQ=49.51;MQ0=6;MQRankSum=-7.905;QD=77.64;ReadPosRankSum=1.148;VQSLOD=4.4356;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:78.26:0,78,2505	1/1:6,1:8:17.99:545,18,0	0/0:34,0:18:24.88:0,25,425	0/0:27,0:21:25.65:0,26,522	1/1:10,20:32:27.09:1272,27,0	1/1:10,8:22:57.04:2496,57,0	1/1:8,8:16:14.92:465,15,0	1/1:18,0:20:29.93:621,30,0	1/1:15,6:22:36.12:1735,36,0	1/1:21,3:30:72.17:2547,72,0	1/1:9,6:18:45.14:1936,45,0	1/1:10,0:23:59.91:1081,60,0	1/1:8,0:17:50.66:1012,51,0	1/1:16,9:31:75.19:3409,75,0	1/1:10,9:24:57.09:2475,57,0	1/1:17,10:31:78.22:3204,78,0	1/1:18,2:28:60.07:2056,60,0	1/1:10,0:16:33.01:1095,33,0	1/1:11,13:23:51.14:1642,51,0	1/1:10,10:28:69.10:3120,69,0	./.	1/1:17,0:24:50.66:1018,51,0	1/1:11,0:24:60.19:1121,60,0	1/1:7,0:10:18.48:353,18,0	1/1:8,19:27:33.11:1951,33,0	1/1:4,26:31:81.26:3782,81,0	1/1:12,7:26:63.08:2808,63,0	1/1:1,0:4:9.03:337,9,0
chr10	77820839	.	A	AC	4409.16	PASS	AB=0.948;AC=26;AF=0.464;AN=56;BaseQRankSum=13.116;DP=634;FS=1.378;HRun=0;HaplotypeScore=221.5713;InbreedingCoeff=-0.1753;MQ=53.35;MQ0=6;MQRankSum=-10.923;QD=8.96;ReadPosRankSum=5.208;VQSLOD=4.9963;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.29:0,90,1239	0/1:7,0:7:26.82:27,0,92	0/0:39,0:28:66.79:0,67,773	0/0:28,0:21:43.86:0,44,510	0/1:24,0:24:3.64:4,0,181	0/1:24,0:24:89.27:89,0,239	0/0:11,0:10:11.91:0,12,196	0/1:27,4:29:95.67:96,0,502	0/1:15,1:16:89.33:89,0,99	0/1:24,4:28:99:198,0,325	0/1:21,1:22:52.15:52,0,343	1/1:6,8:21:59.89:651,60,0	1/1:4,7:19:57.16:708,57,0	0/1:26,4:30:99:126,0,285	0/1:24,0:24:62.42:62,0,265	0/1:31,4:34:99:173,0,352	0/1:29,2:31:99:108,0,532	0/1:16,0:16:23.82:84,0,24	0/0:22,0:20:3.68:0,4,365	0/1:28,0:28:21.95:22,0,357	0/0:3,0:3:3.01:0,3,42	1/1:4,11:22:63.20:785,63,0	1/1:10,7:22:61.98:668,62,0	1/1:3,5:10:22.65:275,23,0	0/1:23,0:24:18.22:18,0,211	0/1:30,1:31:65.51:66,0,401	0/1:22,4:26:99:108,0,264	0/0:6,0:6:15.02:0,15,149
chr10	77820841	.	A	AC	283.08	PASS	AB=0.947;AC=15;AF=0.268;AN=56;BaseQRankSum=4.050;DP=642;FS=4.256;HRun=0;HaplotypeScore=244.5579;InbreedingCoeff=-0.1517;MQ=54.50;MQ0=5;MQRankSum=-6.308;QD=0.84;ReadPosRankSum=-2.479;VQSLOD=1.5378;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.25:0,96,1282	0/1:7,0:7:1:1,0,160	0/0:40,0:30:65.28:0,65,867	0/0:27,0:20:46.85:0,47,554	0/0:24,0:24:32.31:0,32,301	0/1:24,0:24:9.55:10,0,444	0/0:11,0:10:17.92:0,18,219	0/1:28,4:30:69.26:69,0,586	0/1:16,1:17:26.52:27,0,221	0/1:25,4:29:99:119,0,565	0/0:23,1:24:16.27:0,16,521	0/1:21,0:21:1.33:1,0,49	1/1:19,0:19:6.18:32,6,0	0/1:26,4:30:53.98:54,0,535	0/0:22,0:22:38.64:0,39,503	0/1:30,4:33:37.43:37,0,666	0/1:32,2:34:19.23:19,0,733	0/1:17,0:17:0.69:1,0,76	0/0:20,0:19:33.67:0,34,570	0/0:28,0:28:51.76:0,52,701	0/0:3,0:3:3.01:0,3,42	0/1:23,0:22:4.90:7,0,5	0/1:23,0:23:18.66:19,0,30	0/0:10,0:10:0.39:0,0,20	0/0:25,0:25:49.49:0,49,417	0/0:30,1:31:22.49:0,22,661	0/1:23,4:27:31.60:32,0,505	0/0:6,0:6:15.04:0,15,193
chr10	77820843	.	A	AC	3220.51	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=2.198;DP=609;FS=3.628;HRun=4;HaplotypeScore=220.3496;InbreedingCoeff=0.9473;MQ=55.67;MQ0=5;MQRankSum=-6.309;QD=30.97;ReadPosRankSum=2.554;VQSLOD=1.8398;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.19:0,90,970	0/0:5,0:5:14.91:0,15,148	0/0:38,0:28:35.20:0,35,564	0/0:26,0:20:10.62:0,11,315	0/0:24,0:24:32:0,32,250	0/0:23,0:23:60.94:0,61,458	0/0:11,0:10:14.88:0,15,149	0/0:27,0:25:55.88:0,56,545	0/0:17,0:17:40.33:0,40,270	0/0:27,0:27:71.49:0,71,604	0/0:22,0:22:60.52:0,61,473	1/1:20,0:20:54.06:650,54,0	1/1:19,0:19:57.17:719,57,0	0/0:29,0:29:76.48:0,76,561	0/0:21,0:21:58.43:0,58,454	0/0:32,0:31:84.38:0,84,652	0/0:34,0:34:84.73:0,85,772	1/1:4,10:14:35.45:432,35,0	0/0:19,0:18:47.64:0,48,462	0/0:27,0:27:76.17:0,76,622	0/0:3,0:3:3.01:0,3,34	1/1:23,0:22:63.20:809,63,0	1/1:18,0:18:42:511,42,0	1/1:10,0:10:24.03:287,24,0	0/0:24,0:25:45.96:0,46,357	0/0:31,0:31:82.90:0,83,650	0/0:25,0:25:71.65:0,72,552	0/0:6,0:6:15.03:0,15,161
chr10	77820909	.	AT	A	11485.47	PASS	AB=0.579;AC=49;AF=0.875;AN=56;BaseQRankSum=1.946;DP=609;FS=1.162;HRun=10;HaplotypeScore=80.4457;InbreedingCoeff=0.8466;MQ=70.78;MQ0=0;MQRankSum=-2.703;QD=21.75;ReadPosRankSum=2.462;VQSLOD=5.6946;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.19:0,84,916	0/1:3,8:11:6.19:181,0,6	0/0:25,0:23:15.48:0,15,346	0/0:24,0:16:12.32:0,12,151	1/1:2,19:22:59.01:501,59,0	1/1:4,16:20:47.98:417,48,0	1/1:0,17:17:47.97:413,48,0	1/1:5,16:20:41.89:349,42,0	1/1:2,20:22:50.99:443,51,0	1/1:3,23:26:68.96:594,69,0	1/1:3,15:18:41.98:365,42,0	1/1:2,15:17:41.98:365,42,0	1/1:4,14:18:41.97:365,42,0	1/1:1,23:25:68.02:579,68,0	1/1:2,29:31:77.98:677,78,0	1/1:4,26:29:65.85:573,66,0	1/1:2,39:41:99:964,111,0	1/1:2,13:15:35.99:312,36,0	1/1:3,15:18:44.98:391,45,0	1/1:3,23:26:65.98:573,66,0	1/1:2,6:8:18:156,18,0	1/1:3,16:19:44.97:391,45,0	1/1:1,12:13:32.98:286,33,0	1/1:0,22:22:65.99:573,66,0	1/1:2,17:19:23.85:435,24,0	1/1:6,16:22:56.97:490,57,0	1/1:2,25:27:74.98:651,75,0	1/1:3,17:20:50.99:443,51,0
chr10	77822210	.	GTAA	G	6785.76	PASS	AB=1.000;AC=39;AF=0.780;AN=50;BaseQRankSum=2.245;DP=331;FS=4.019;HRun=0;HaplotypeScore=46.4442;InbreedingCoeff=0.6910;MQ=67.89;MQ0=0;MQRankSum=2.372;QD=25.32;ReadPosRankSum=0.120;VQSLOD=4.3466;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:54.19:0,54,1073	1/1:2,1:3:3.01:42,3,0	./.	0/1:4,0:4:5.81:6,0,28	1/1:2,8:10:24.08:327,24,0	1/1:6,27:33:66.22:931,66,0	1/1:2,3:5:6.02:85,6,0	1/1:12,19:31:57.13:730,57,0	1/1:4,9:13:21.07:296,21,0	1/1:4,14:18:42.14:593,42,0	1/1:2,8:10:21.07:281,21,0	0/0:4,0:4:6:0,6,62	0/0:3,0:9:6.02:0,6,78	1/1:2,9:11:27.09:381,27,0	1/1:5,11:16:18.06:254,18,0	1/1:6,7:13:15.05:211,15,0	1/1:5,17:22:36.12:508,36,0	0/0:4,0:10:3.01:0,3,39	1/1:7,6:13:18.05:237,18,0	1/1:2,6:8:15.05:207,15,0	1/1:2,1:3:3.01:42,3,0	./.	0/0:4,0:7:9.03:0,9,116	./.	1/1:1,15:16:39.13:550,39,0	1/1:4,11:15:33.08:429,33,0	1/1:6,15:21:39.13:550,39,0	1/1:0,3:3:9.03:127,9,0
chr10	77822699	.	CGAG	C	7367.28	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.138;DP=732;FS=0.000;HRun=0;HaplotypeScore=107.7445;InbreedingCoeff=0.9879;MQ=86.67;MQ0=0;MQRankSum=-6.465;QD=42.83;ReadPosRankSum=3.827;VQSLOD=6.3023;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,2956	0/0:9,0:9:24.07:0,24,502	0/0:30,0:30:86.96:0,87,1771	0/0:19,0:19:54.12:0,54,1065	0/0:23,0:23:63.20:0,63,1380	0/0:24,0:24:72.24:0,72,1589	0/0:17,0:17:51.16:0,51,1113	0/0:34,0:34:90.30:0,90,1961	0/0:26,0:26:72.25:0,72,1631	0/0:18,0:18:54.19:0,54,1205	0/0:25,0:25:72.21:0,72,1583	1/1:0,32:32:90.31:1497,90,0	1/1:0,29:29:81.28:1348,81,0	0/0:35,0:35:99:0,99,2164	0/0:30,0:30:90.31:0,90,2039	0/0:27,0:27:80.63:0,81,1716	0/0:42,0:42:99:0,120,2587	1/1:0,21:21:54.18:898,54,0	0/0:19,0:19:54.17:0,54,1181	0/0:24,0:24:69.22:0,69,1521	0/0:33,0:33:99:0,99,2242	1/1:0,21:21:57.15:912,57,0	1/1:2,32:34:78.11:1263,78,0	1/1:1,34:35:87.30:1449,87,0	0/0:22,0:22:63.19:0,63,1305	0/0:30,0:30:90.29:0,90,1947	0/0:24,0:24:69.18:0,69,1474	0/0:3,0:3:9.03:0,9,204
chr10	77824893	.	T	TTATG	2298.96	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-7.405;DP=462;FS=6.555;HRun=0;HaplotypeScore=71.3622;InbreedingCoeff=0.9370;MQ=69.43;MQ0=2;MQRankSum=0.832;QD=28.74;ReadPosRankSum=-0.656;VQSLOD=2.1506;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.27:0,78,1283	0/0:8,0:8:21.06:0,21,323	0/0:11,0:11:8.68:0,9,53	0/0:15,0:11:15.05:0,15,220	0/0:13,0:13:33.08:0,33,500	0/0:16,0:16:36.10:0,36,543	0/0:9,0:9:18.04:0,18,276	0/0:32,0:32:39.11:0,39,557	0/0:12,0:12:33.10:0,33,531	0/0:22,0:22:60.19:0,60,948	0/0:17,0:17:48.11:0,48,781	1/1:3,11:14:24.08:599,24,0	1/1:0,11:12:18.06:446,18,0	0/0:11,0:11:21.05:0,21,306	0/0:16,0:16:33.09:0,33,504	0/0:19,0:19:51.15:0,51,789	0/0:31,0:31:72.21:0,72,1165	1/1:4,22:27:33.11:824,33,0	0/0:14,0:13:30.09:0,30,478	0/0:26,0:26:66.18:0,66,1029	0/0:14,0:13:30.05:0,30,423	1/1:1,7:8:8.86:157,9,0	1/1:2,6:10:6.02:150,6,0	1/1:4,5:9:12.04:300,12,0	0/0:16,0:16:36.11:0,36,565	0/0:16,0:16:36.06:0,36,499	0/0:23,0:22:66.19:0,66,1031	0/0:12,0:12:21.06:0,21,355
chr10	77824969	.	C	CTTAT	2021.40	PASS	AB=0.744;AC=24;AF=0.500;AN=48;BaseQRankSum=-3.252;DP=331;FS=1.694;HRun=0;HaplotypeScore=53.7844;InbreedingCoeff=0.5483;MQ=62.03;MQ0=1;MQRankSum=-0.700;QD=12.40;ReadPosRankSum=-2.228;VQSLOD=2.4258;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:21.07:0,21,324	1/1:6,1:7:3.01:70,3,0	./.	./.	1/1:6,1:7:6.02:123,6,0	1/1:7,7:14:15.05:352,15,0	1/1:1,2:4:6.02:141,6,0	1/1:36,0:34:23.87:234,24,0	./.	1/1:8,1:9:3.01:70,3,0	0/1:7,3:10:32.14:181,0,32	0/0:7,0:7:12.04:0,12,181	0/0:10,0:10:12.04:0,12,185	1/1:9,2:11:9.03:207,9,0	1/1:6,3:9:6.02:141,6,0	1/1:9,1:10:3.01:70,3,0	0/0:30,0:30:39.12:0,39,581	0/0:15,0:21:24.70:0,25,209	1/1:5,0:5:3.01:62,3,0	1/1:11,2:13:6.02:141,6,0	./.	0/0:2,0:2:3.01:0,3,46	0/0:9,0:9:9.03:0,9,139	0/0:3,0:3:3.01:0,3,46	0/1:17,11:28:25.23:401,0,25	0/0:10,0:10:9.03:0,9,136	0/0:12,0:12:9.03:0,9,139	0/0:16,0:16:24.06:0,24,342
chr10	77826293	.	GT	G	3629.12	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.305;DP=715;FS=0.344;HRun=9;HaplotypeScore=74.1868;InbreedingCoeff=0.9928;MQ=79.78;MQ0=0;MQRankSum=-1.847;QD=23.26;ReadPosRankSum=5.103;VQSLOD=4.0995;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,1285	0/0:9,0:9:27.07:0,27,302	0/0:32,1:31:52.78:0,53,597	0/0:24,0:24:40.32:0,40,448	0/0:27,0:27:78.19:0,78,870	0/0:18,0:18:48.14:0,48,554	0/0:27,0:27:72.17:0,72,799	0/0:36,0:37:90.08:0,90,1001	0/0:20,1:21:35.67:0,36,622	0/0:28,0:28:78.21:0,78,879	0/0:19,1:20:26.69:0,27,538	1/1:0,35:35:90.05:823,90,0	1/1:1,22:23:59.88:549,60,0	0/0:24,0:24:66.15:0,66,725	0/0:28,0:28:81.21:0,81,907	0/0:28,0:28:75.21:0,75,855	0/0:25,0:25:66.20:0,66,761	1/1:2,11:13:33.02:302,33,0	0/0:18,1:19:23.65:0,24,505	0/0:27,0:27:69.19:0,69,786	0/0:33,1:34:62.78:0,63,957	1/1:5,32:37:64.43:842,64,0	1/1:0,15:15:42.02:383,42,0	1/1:4,29:33:80.96:730,81,0	0/0:28,0:28:84.09:0,84,929	0/0:27,0:27:66.18:0,66,745	0/0:29,0:28:84.20:0,84,940	0/0:4,0:4:12.04:0,12,138
chr10	77827535	.	TACACACAC	T	2283.65	PASS	AB=0.888;AC=31;AF=0.596;AN=52;BaseQRankSum=4.656;DP=528;FS=5.238;HRun=0;HaplotypeScore=130.9396;InbreedingCoeff=0.5075;MQ=66.30;MQ0=8;MQRankSum=-4.607;QD=7.93;ReadPosRankSum=0.258;VQSLOD=2.3488;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:57.67:0,58,1904	1/1:8,0:10:6.02:123,6,0	./.	./.	1/1:12,1:16:8.97:179,9,0	1/1:8,9:18:17.55:331,18,0	1/1:12,7:20:11.86:158,12,0	0/0:14,0:12:1.82:0,2,5	1/1:9,5:15:12.04:280,12,0	1/1:22,0:22:4.29:50,4,0	1/1:15,0:15:3:26,3,0	0/0:17,0:17:24.08:0,24,867	0/0:22,0:22:33.09:0,33,1112	1/1:16,0:16:6.01:100,6,0	0/1:14,0:17:30.69:31,0,51	1/1:7,9:17:21.02:446,21,0	0/1:22,1:25:49.34:49,0,99	0/0:12,0:18:17.60:0,18,294	0/0:17,0:17:1.04:0,1,3	0/1:14,0:16:31.57:121,0,32	1/1:27,0:26:9:122,9,0	0/0:13,0:13:9.01:0,9,244	0/0:13,0:19:12.04:0,12,398	0/0:16,0:29:30.06:0,30,927	1/1:10,3:15:9.03:165,9,0	1/1:15,3:18:5.07:130,5,0	1/1:9,3:12:3.01:75,3,0	1/1:6,3:9:3.48:75,3,0
chr10	77829710	.	GT	G	1503.30	PASS	AB=0.895;AC=14;AF=0.250;AN=56;BaseQRankSum=8.984;DP=574;FS=6.260;HRun=11;HaplotypeScore=59.6572;InbreedingCoeff=0.5977;MQ=72.55;MQ0=1;MQRankSum=-0.036;QD=8.54;ReadPosRankSum=1.701;VQSLOD=2.1419;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,2:26:13.67:0,14,527	0/0:4,0:4:5.22:0,5,90	0/1:18,2:20:16.11:16,0,217	0/1:9,1:8:17.36:17,0,26	0/0:21,0:22:50.96:0,51,525	0/0:30,1:33:53.94:0,54,806	0/0:12,0:12:33.07:0,33,344	0/0:27,0:27:57.11:0,57,588	0/0:17,0:17:45.11:0,45,473	0/0:30,1:31:41.51:0,42,636	0/0:22,1:24:32.04:0,32,492	1/1:2,18:20:41.95:345,42,0	1/1:6,21:27:50.91:419,51,0	0/0:18,0:18:54.09:0,54,562	0/0:31,0:31:84.18:0,84,875	0/0:14,1:15:14.44:0,14,352	0/0:14,1:17:20.30:0,20,405	0/0:15,0:15:39.10:0,39,415	0/1:19,2:20:13.09:13,0,284	0/0:29,1:31:44.82:0,45,655	0/1:18,2:20:19.21:19,0,395	1/1:9,17:26:44.15:342,44,0	1/1:2,17:19:41.93:344,42,0	1/1:3,8:11:20.97:172,21,0	0/0:13,1:15:14.28:0,14,337	0/0:22,0:22:51.58:0,52,533	0/0:21,0:23:62.82:0,63,628	0/0:13,1:15:17.32:0,17,366
chr10	77830336	.	G	GGTGT	6556.72	PASS	AB=0.909;AC=28;AF=0.519;AN=54;BaseQRankSum=2.295;DP=808;FS=2.151;HRun=0;HaplotypeScore=191.7359;InbreedingCoeff=0.4283;MQ=69.00;MQ0=10;MQRankSum=-5.274;QD=14.38;ReadPosRankSum=-2.488;VQSLOD=4.4640;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:9.49:0,9,401	1/1:8,0:12:12.04:223,12,0	1/1:42,0:28:0.47:1,0,0	./.	1/1:26,0:31:29.55:411,30,0	0/1:28,0:32:26.77:27,0,252	0/0:28,0:29:1.32:0,1,557	0/1:46,0:45:72.07:129,0,72	0/1:16,0:17:22.94:23,0,133	1/1:32,0:34:33.07:525,33,0	1/1:18,1:21:24.08:431,24,0	1/1:17,6:26:38.60:750,39,0	0/1:20,3:24:61.64:425,0,62	1/1:19,2:28:27.09:536,27,0	0/0:28,0:28:39.08:0,39,564	0/0:27,0:30:27.06:0,27,348	0/0:14,0:15:14.52:0,15,160	1/1:17,0:19:7.07:262,7,0	0/0:34,0:32:5.18:0,5,290	0/0:24,0:25:30.02:0,30,427	0/0:62,0:64:2.64:0,3,528	1/1:18,6:27:32.69:551,33,0	0/1:16,1:18:35.04:152,0,35	0/1:16,8:24:17.15:591,0,17	0/0:27,0:27:39.12:0,39,574	1/1:29,2:41:24.85:1117,25,0	0/0:23,0:24:27.07:0,27,384	1/1:10,2:12:24.08:401,24,0
chr10	77830397	.	C	CTG	27751.25	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-9.182;DP=929;FS=1.727;HRun=0;HaplotypeScore=152.0286;InbreedingCoeff=0.9992;MQ=60.41;MQ0=6;MQRankSum=-5.724;QD=34.82;ReadPosRankSum=3.686;VQSLOD=6.7522;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,156,1995	1/1:3,12:15:33.11:560,33,0	0/0:34,0:31:47.61:0,48,791	0/0:39,0:37:90.26:0,90,1122	1/1:5,19:23:48.08:796,48,0	1/1:9,19:28:44.19:718,44,0	1/1:7,21:28:51.17:867,51,0	1/1:8,49:56:99:2342,144,0	1/1:3,35:39:96.33:1628,96,0	1/1:4,38:42:99:1880,114,0	1/1:5,24:29:60.21:1018,60,0	1/1:9,24:34:66.23:1120,66,0	1/1:8,21:29:60.05:933,60,0	1/1:6,23:29:60.21:1017,60,0	1/1:6,28:34:63.22:1071,63,0	1/1:4,27:30:60.10:984,60,0	1/1:6,25:29:68.26:1115,68,0	1/1:4,18:22:48.09:786,48,0	1/1:7,27:30:66.20:1078,66,0	1/1:4,30:33:81.28:1367,81,0	1/1:19,41:59:99:1875,114,0	1/1:6,18:25:45.14:731,45,0	1/1:2,24:26:57.20:966,57,0	1/1:7,31:38:72.16:1221,72,0	1/1:7,31:39:75.26:1271,75,0	1/1:12,23:35:78.15:1267,78,0	1/1:4,20:24:45.09:731,45,0	1/1:1,8:9:24.08:408,24,0
chr10	77832565	.	AT	A	495.81	PASS	AC=26;AF=1.000;AN=26;DP=30;FS=0.000;HRun=2;HaplotypeScore=21.5260;InbreedingCoeff=-0.0506;MQ=70.92;MQ0=0;QD=17.10;VQSLOD=3.5559;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:2.96:19,3,0	./.	1/1:4,0:3:2.04:6,2,0	./.	./.	1/1:0,1:1:2.96:19,3,0	./.	./.	1/1:0,1:1:2.96:19,3,0	1/1:0,5:5:15.04:178,15,0	1/1:0,4:4:5.91:39,6,0	./.	./.	./.	1/1:0,1:1:2.96:19,3,0	./.	./.	./.	./.	1/1:0,5:5:14.78:96,15,0	./.	1/1:0,2:2:5.91:38,6,0	./.	./.	1/1:0,2:2:5.91:38,6,0	1/1:0,1:1:3.01:38,3,0	1/1:0,1:1:2.96:19,3,0	1/1:0,1:1:3.01:38,3,0
chr10	77833879	.	TTC	T	111.19	PASS	AB=0.981;AC=14;AF=0.350;AN=40;BaseQRankSum=2.736;DP=669;FS=27.201;HRun=0;HaplotypeScore=94.4380;InbreedingCoeff=0.5307;MQ=58.08;MQ0=22;MQRankSum=-1.221;QD=0.63;ReadPosRankSum=0.867;VQSLOD=0.1785;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:8.82:0,9,109	1/1:11,0:12:2.84:14,3,0	./.	./.	0/1:17,0:17:0:0,0,0	0/0:28,0:33:5.88:0,6,44	0/0:22,0:22:8.85:0,9,101	0/0:42,0:41:8.43:0,8,46	0/0:18,0:18:11.89:0,12,93	1/1:18,3:21:8.85:78,9,0	1/1:24,1:25:3.01:32,3,0	0/1:24,1:25:19.85:20,0,118	0/0:28,0:29:29.83:0,30,306	1/1:18,5:24:5.52:46,6,0	0/0:28,0:28:11.99:0,12,109	0/0:22,0:26:5.26:0,5,55	0/0:17,0:27:14.95:0,15,120	./.	./.	1/1:18,0:22:2.84:14,3,0	./.	0/0:24,0:24:3.01:0,3,36	./.	0/0:11,0:14:9.02:0,9,114	0/0:24,0:24:10.89:0,11,133	./.	1/1:26,0:28:8.20:42,8,0	./.
chr10	77835906	.	A	AT	2832.86	PASS	AB=0.931;AC=15;AF=0.268;AN=56;BaseQRankSum=-8.832;DP=699;FS=7.114;HRun=10;HaplotypeScore=70.3056;InbreedingCoeff=0.7896;MQ=67.06;MQ0=0;MQRankSum=0.037;QD=14.91;ReadPosRankSum=0.734;VQSLOD=3.7711;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,2:25:36.92:0,37,510	0/0:15,0:16:46.99:0,47,375	0/1:14,0:13:0.89:1,0,89	0/0:11,0:10:16.46:0,16,144	0/0:28,0:29:73.92:0,74,596	0/0:21,0:21:47.21:0,47,393	0/0:17,0:17:47.92:0,48,391	0/0:33,1:34:39.89:0,40,535	0/0:27,0:27:71.87:0,72,588	0/0:35,1:36:54.90:0,55,657	0/0:29,1:30:48.90:0,49,608	1/1:7,21:28:17.29:391,17,0	1/1:3,20:23:48.12:512,48,0	0/0:21,0:22:52.96:0,53,425	0/0:30,0:31:76.92:0,77,619	0/0:26,0:27:17.52:0,18,446	0/0:34,1:35:92.85:0,93,763	1/1:2,10:12:24.06:256,24,0	0/1:11,1:12:2.04:2,0,192	0/0:34,0:34:77.87:0,78,637	0/0:20,0:20:44.92:0,45,369	1/1:7,16:23:36.09:384,36,0	1/1:4,28:33:72.05:751,72,0	1/1:0,24:24:63.16:672,63,0	0/0:31,0:32:59.53:0,60,645	0/0:35,0:36:70.90:0,71,572	0/0:26,0:26:77.90:0,78,640	0/1:16,3:20:51.97:52,0,233
chr10	77838582	.	GTGGTC	G	27676.24	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=19.559;DP=821;FS=2.596;HRun=0;HaplotypeScore=167.6466;InbreedingCoeff=0.9987;MQ=85.63;MQ0=0;MQRankSum=-11.951;QD=55.24;ReadPosRankSum=3.766;VQSLOD=5.3728;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:67,0:67:99:0,199,6323	1/1:1,5:6:18.06:369,18,0	0/0:37,0:37:99:0,105,3298	0/0:30,0:30:81.18:0,81,2273	1/1:2,26:28:69.23:1476,69,0	1/1:1,24:25:60.21:1337,60,0	1/1:0,34:34:87.23:1886,87,0	1/1:4,28:32:81.25:1709,81,0	1/1:2,37:39:90.31:2006,90,0	1/1:1,20:21:60.21:1337,60,0	1/1:2,28:30:78.27:1737,78,0	0/0:36,0:36:99:0,105,3361	0/0:27,0:27:78.27:0,78,2464	1/1:1,17:18:42.14:936,42,0	1/1:1,25:26:72.18:1554,72,0	1/1:0,32:32:81.28:1805,81,0	1/1:3,25:28:60.21:1337,60,0	0/0:24,0:24:72.25:0,72,2313	1/1:3,12:15:36.11:748,36,0	1/1:2,35:37:99:2290,105,0	1/1:3,24:27:56.99:1120,57,0	0/0:39,0:39:99:0,114,3425	0/0:28,0:28:84.29:0,84,2617	0/0:32,0:32:93.31:0,93,2875	1/1:2,22:24:51.17:1136,51,0	1/1:1,35:36:99:2268,102,0	1/1:1,29:30:84.22:1822,84,0	1/1:0,13:13:36.12:802,36,0
chr10	77839522	.	AG	A	20800.97	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=15.192;DP=816;FS=4.732;HRun=1;HaplotypeScore=77.8047;InbreedingCoeff=0.9975;MQ=87.10;MQ0=0;MQRankSum=-3.822;QD=39.62;ReadPosRankSum=1.515;VQSLOD=5.5877;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,178,2723	1/1:0,13:13:36.12:503,36,0	0/0:35,0:35:99:0,105,1535	0/0:19,0:19:57.19:0,57,870	1/1:0,23:23:69.19:938,69,0	1/1:0,25:25:72.24:1007,72,0	1/1:0,26:26:72.24:1000,72,0	1/1:0,37:37:99:1499,111,0	1/1:0,29:29:78.26:1091,78,0	1/1:0,37:37:99:1514,111,0	1/1:0,35:35:99:1424,105,0	0/0:29,0:29:87.30:0,87,1390	0/0:23,0:23:69.19:0,69,1031	1/1:0,31:31:84.28:1170,84,0	1/1:0,37:37:96.32:1343,96,0	1/1:0,30:30:87.29:1217,87,0	1/1:0,16:16:39.13:545,39,0	0/0:18,0:18:54.14:0,54,834	1/1:0,24:24:72.23:987,72,0	1/1:0,37:37:99:1502,111,0	1/1:0,16:16:48.16:671,48,0	0/0:31,0:31:93.32:0,93,1482	0/0:36,0:36:99:0,105,1625	0/0:39,0:39:99:0,117,1841	1/1:0,26:26:75.25:1049,75,0	1/1:0,38:38:99:1538,114,0	1/1:0,40:40:99:1594,114,0	1/1:0,5:5:15.05:210,15,0
chr10	77841155	.	G	GA	20232.73	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-8.682;DP=566;FS=2.476;HRun=2;HaplotypeScore=53.1426;InbreedingCoeff=0.9996;MQ=82.39;MQ0=0;MQRankSum=-6.526;QD=39.83;ReadPosRankSum=2.206;VQSLOD=5.2467;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.21:0,75,915	1/1:0,12:12:33.11:475,33,0	0/0:18,0:18:51.14:0,51,607	0/0:14,0:14:36.53:0,37,410	1/1:0,28:28:81.23:1143,81,0	1/1:1,15:16:42.14:605,42,0	1/1:0,15:15:45.15:648,45,0	1/1:1,31:32:93.28:1301,93,0	1/1:1,13:14:39.13:562,39,0	1/1:1,15:16:45.15:648,45,0	1/1:1,30:31:87.21:1206,87,0	1/1:1,15:16:45.15:648,45,0	1/1:0,31:31:90.30:1292,90,0	1/1:0,16:16:45.15:648,45,0	1/1:1,14:15:42.14:605,42,0	1/1:0,17:17:48.16:691,48,0	1/1:1,27:28:75.25:1080,75,0	1/1:3,10:13:36.07:476,36,0	1/1:4,26:30:81.23:1120,81,0	1/1:2,26:28:75.17:1035,75,0	1/1:0,15:15:45.15:648,45,0	1/1:1,20:21:60.17:843,60,0	1/1:0,19:19:54.04:777,54,0	1/1:1,11:12:33.10:457,33,0	1/1:0,23:23:66.22:951,66,0	1/1:2,14:16:39.13:560,39,0	1/1:0,22:22:63.21:907,63,0	1/1:0,22:22:63.21:907,63,0
chr10	77841210	.	T	TA	2475.26	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-0.847;DP=559;FS=0.000;HRun=10;HaplotypeScore=84.8077;InbreedingCoeff=0.9464;MQ=72.00;MQ0=0;MQRankSum=-1.441;QD=19.34;ReadPosRankSum=-0.608;VQSLOD=3.9010;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:56.89:0,57,464	0/0:10,0:10:29.97:0,30,246	0/0:10,0:11:19.45:0,19,140	0/0:8,0:8:14.57:0,15,109	0/0:26,0:26:59.97:0,60,475	0/0:15,0:15:41.94:0,42,345	0/0:10,0:10:23.89:0,24,186	0/0:22,2:24:33.90:0,34,481	0/0:17,0:17:41.95:0,42,345	0/0:32,0:32:68.82:0,69,560	0/0:26,0:26:62.91:0,63,514	1/1:4,11:15:24.03:285,24,0	1/1:13,21:34:65.29:802,65,0	0/0:17,0:18:46.97:0,47,372	0/0:11,1:12:0.95:0,1,209	0/0:17,0:18:46.97:0,47,372	0/0:27,0:27:65.77:0,66,542	1/1:2,0:17:31.44:168,31,0	0/0:20,0:20:53.89:0,54,439	0/0:32,0:32:83.87:0,84,686	0/0:18,0:19:46.97:0,47,372	1/1:4,20:24:56.73:571,57,0	1/1:9,14:23:50.87:506,51,0	1/1:2,12:15:17.28:329,17,0	0/0:17,0:17:41.91:0,42,337	0/0:18,0:18:47.93:0,48,394	0/0:29,0:29:74.85:0,75,607	0/0:18,0:18:50.92:0,51,415
chr10	77846613	.	GT	G	1710.32	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=10.439;DP=624;FS=2.709;HRun=9;HaplotypeScore=67.7632;InbreedingCoeff=0.8997;MQ=78.10;MQ0=1;MQRankSum=-0.296;QD=14.49;ReadPosRankSum=2.374;VQSLOD=3.9673;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:84.14:0,84,903	0/0:13,0:13:39.09:0,39,432	0/0:37,0:25:24.41:0,24,243	0/1:22,0:15:14.30:14,0,80	0/0:29,0:29:72.16:0,72,790	0/0:21,0:21:43.65:0,44,641	0/0:18,0:18:45.12:0,45,508	0/0:27,0:27:69.19:0,69,781	0/0:24,0:24:63.19:0,63,727	0/0:33,0:33:84.24:0,84,963	0/0:18,1:19:20.66:0,21,481	1/1:4,23:27:25.41:487,25,0	1/1:2,10:12:30.02:274,30,0	0/0:26,0:26:69.17:0,69,768	0/0:26,0:26:69.06:0,69,743	0/0:20,0:20:51.09:0,51,557	0/0:28,0:28:78.22:0,78,889	1/1:3,7:10:18.01:165,18,0	0/0:21,0:20:52.04:0,52,591	0/0:25,0:25:72.20:0,72,822	0/0:18,0:18:45.12:0,45,510	1/1:1,15:16:39.02:356,39,0	1/1:1,14:15:39.02:357,39,0	1/1:4,11:15:27.01:247,27,0	0/0:21,0:21:31.26:0,31,542	0/0:20,0:21:60.13:0,60,664	0/0:26,0:25:78.14:0,78,840	0/0:16,0:17:39.83:0,40,432
chr10	77847469	.	A	ATGTGTG	6639.06	PASS	AB=0.744;AC=36;AF=0.643;AN=56;BaseQRankSum=-5.439;DP=724;FS=1.667;HRun=0;HaplotypeScore=166.7941;InbreedingCoeff=0.4945;MQ=63.11;MQ0=10;MQRankSum=-5.252;QD=12.62;ReadPosRankSum=-2.720;VQSLOD=3.8994;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:43:21.66:0,22,876	0/0:7,0:12:10.45:0,10,131	0/0:34,0:24:2.19:0,2,14	0/0:27,0:17:2.86:0,3,48	0/1:13,0:18:36.33:36,0,111	1/1:13,5:20:18.06:505,18,0	1/1:15,7:24:12.04:330,12,0	1/1:42,0:42:37.64:669,38,0	0/1:20,6:29:20.71:315,0,21	0/1:20,0:29:5.10:5,0,177	0/0:10,0:13:1.77:0,2,3	1/1:16,0:25:12.59:186,13,0	1/1:17,0:18:12.42:118,12,0	0/0:10,0:29:11.92:0,12,79	1/1:21,12:37:27.09:757,27,0	1/1:20,10:35:30.10:776,30,0	1/1:21,9:34:24.08:772,24,0	1/1:11,4:16:9.03:264,9,0	1/1:16,0:21:10.80:134,11,0	1/1:8,0:13:3.01:38,3,0	0/1:23,0:47:11.80:335,0,12	1/1:11,6:17:9.03:281,9,0	1/1:11,6:24:6.02:139,6,0	1/1:6,0:20:27.09:346,27,0	1/1:15,2:19:8.91:180,9,0	0/0:14,0:19:2.65:0,3,5	1/1:20,1:34:30.10:452,30,0	0/0:8,0:20:13.01:0,13,136
chr10	77847488	.	T	TGTGT	6129.51	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=0.829;DP=640;FS=6.286;HRun=0;HaplotypeScore=116.5209;InbreedingCoeff=0.1671;MQ=56.04;MQ0=12;MQRankSum=-1.996;QD=11.50;ReadPosRankSum=0.036;VQSLOD=3.7411;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:22.78:0,23,654	0/1:12,0:12:41.52:42,0,75	0/0:34,0:20:2.27:0,2,35	0/0:32,0:21:2.86:0,3,45	0/1:14,0:14:77.67:91,0,78	1/1:21,0:21:18.06:332,18,0	1/1:18,0:18:9.03:176,9,0	1/1:35,0:35:26.09:246,26,0	0/1:22,0:22:19.89:213,0,20	0/1:26,0:26:46.77:47,0,121	1/1:7,0:7:5.49:24,5,0	1/1:22,0:22:23.76:394,24,0	1/1:12,5:17:11.88:180,12,0	0/1:28,0:28:8.51:125,0,9	1/1:36,0:36:24.08:456,24,0	1/1:30,0:30:27.09:528,27,0	1/1:31,0:31:21.07:363,21,0	1/1:14,0:14:8.05:109,8,0	1/1:14,0:13:14.52:177,15,0	1/1:12,0:12:3.01:72,3,0	1/1:43,0:42:8.10:641,8,0	1/1:18,0:18:9.03:152,9,0	1/1:16,0:16:5.67:123,6,0	1/1:24,0:23:27.09:644,27,0	1/1:13,0:13:9.03:195,9,0	1/1:14,0:14:8.23:37,8,0	1/1:25,0:24:30.57:695,31,0	0/1:20,0:20:66.97:70,0,67
chr10	77848295	.	GTGTGTTGTGTGT	G	849.42	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.906;DP=849;FS=0.000;HRun=0;HaplotypeScore=317.2619;InbreedingCoeff=0.8204;MQ=55.44;MQ0=28;MQRankSum=-4.447;QD=9.76;ReadPosRankSum=-1.347;VQSLOD=1.6383;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,107,4530	0/0:14,0:14:30.09:0,30,948	0/0:56,0:14:27.09:0,27,620	0/0:59,0:21:25.88:0,26,319	0/0:33,0:33:85.14:0,85,2906	0/0:27,0:27:75.21:0,75,2911	0/0:28,0:28:75.25:0,75,2757	0/0:34,0:31:54.16:0,54,1380	0/0:21,0:21:52.06:0,52,1954	0/0:40,0:37:84.29:0,84,3810	0/0:20,0:20:39.60:0,40,1764	1/1:7,14:21:13.84:380,14,0	1/1:9,2:11:15.05:428,15,0	0/0:33,0:33:72.25:0,72,3235	0/0:22,0:22:60.19:0,60,3007	0/0:15,0:15:39.13:0,39,1715	0/0:40,0:40:92.08:0,92,3745	0/0:29,0:28:48.62:0,49,1422	0/0:25,0:24:49.05:0,49,1603	0/0:26,0:26:52.12:0,52,1795	0/0:43,0:43:96.19:0,96,3364	1/1:14,22:36:0.70:87,1,0	1/1:8,11:19:2.98:89,3,0	0/0:10,25:35:3.95:0,4,42	0/0:35,0:35:72.25:0,72,2566	0/0:40,0:39:99:0,102,3907	0/0:25,0:25:54.18:0,54,2315	0/0:16,0:16:48.15:0,48,2330
chr10	77848306	.	GTTGTGT	G	488.25	PASS	AB=0.870;AC=7;AF=0.125;AN=56;BaseQRankSum=3.894;DP=824;FS=5.088;HRun=0;HaplotypeScore=237.7033;InbreedingCoeff=0.7198;MQ=53.76;MQ0=30;MQRankSum=-5.785;QD=5.74;ReadPosRankSum=-1.369;VQSLOD=1.9721;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,123,3402	0/0:14,0:14:33.10:0,33,810	0/0:54,0:12:31.66:0,32,640	0/0:52,0:12:25.54:0,26,293	0/0:33,0:33:90.25:0,90,2216	0/0:29,0:29:84.24:0,84,2264	0/0:29,0:29:87.26:0,87,2319	0/0:31,0:26:63:0,63,1262	0/0:18,0:18:52.06:0,52,1422	0/0:38,0:35:91.88:0,92,2702	0/0:17,0:17:48.63:0,49,1301	0/1:17,2:20:8.21:171,0,8	1/1:10,2:14:21.61:369,22,0	0/0:30,0:30:75.25:0,75,2250	0/0:22,0:22:60.19:0,60,1986	0/0:13,0:13:39.10:0,39,1152	0/0:41,0:41:99:0,103,2739	0/0:30,0:29:51.15:0,51,1138	0/0:25,0:22:57.11:0,57,1372	0/0:22,0:22:54.65:0,55,1435	0/0:41,0:41:99:0,102,2641	1/1:25,7:33:4.36:45,4,0	1/1:15,3:18:4.93:34,5,0	0/0:30,3:35:3.48:0,3,41	0/0:37,0:37:84.23:0,84,2034	0/0:41,0:40:99:0,116,2938	0/0:20,0:20:57.19:0,57,1684	0/0:17,0:17:51.16:0,51,1566
chr10	77848333	.	TGTGTGTGCGC	T	1582.54	PASS	AB=0.983;AC=20;AF=0.370;AN=54;BaseQRankSum=-0.746;DP=745;FS=19.151;HRun=0;HaplotypeScore=286.2330;InbreedingCoeff=-0.1763;MQ=52.29;MQ0=21;MQRankSum=0.455;QD=3.60;ReadPosRankSum=-4.606;VQSLOD=0.2633;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,126,4482	0/0:9,0:9:12.04:0,12,302	0/0:15,0:3:9.02:0,9,139	./.	0/0:38,0:37:57.11:0,57,1176	0/1:22,0:22:51.12:51,0,895	0/1:26,0:26:99:144,0,1229	0/0:28,0:23:3.15:0,3,943	0/1:15,0:15:53.83:54,0,730	0/1:38,0:37:81.12:81,0,1962	0/1:20,0:20:23.75:24,0,716	1/1:21,2:23:3.93:315,4,0	0/1:16,2:18:43.59:227,0,44	0/0:28,0:28:21.26:0,21,1459	0/0:19,0:19:51.16:0,51,1222	0/1:11,0:11:13.69:14,0,729	0/0:43,0:42:72.11:0,72,1665	0/1:29,0:28:25.78:26,0,89	0/1:23,0:23:67.20:67,0,636	0/0:25,0:25:32.90:0,33,619	0/1:32,0:32:73.21:73,0,1140	1/1:31,7:38:20.67:235,21,0	0/1:16,3:19:17.09:175,0,17	1/1:37,3:39:9.41:102,9,0	0/0:34,0:35:38.76:0,39,931	0/1:43,0:41:58.28:58,0,1680	0/1:20,0:19:38.67:39,0,998	0/1:23,0:22:64.09:64,0,854
chr10	77848335	.	TGTGTGC	T	961.89	PASS	AB=1.000;AC=18;AF=0.333;AN=54;BaseQRankSum=-0.324;DP=734;FS=12.170;HRun=0;HaplotypeScore=246.5275;InbreedingCoeff=0.0501;MQ=52.65;MQ0=17;MQRankSum=0.646;QD=2.38;ReadPosRankSum=-4.737;VQSLOD=0.5032;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,114,2675	0/0:9,0:9:12.04:0,12,185	0/0:12,0:2:6.01:0,6,71	./.	0/0:37,0:36:52.98:0,53,774	0/1:23,0:23:30.03:30,0,533	0/1:25,0:25:60.59:61,0,826	0/0:28,0:24:8.40:0,8,610	0/1:15,0:15:27.21:27,0,437	0/1:37,0:37:3.48:3,0,1257	0/1:20,0:20:1.18:1,0,450	0/1:23,0:23:0.29:133,0,0	0/1:18,0:18:38.02:98,0,38	0/0:28,0:28:20.91:0,21,882	0/0:18,0:18:48.14:0,48,744	0/0:11,0:11:10.92:0,11,465	0/0:44,0:43:72.20:0,72,1064	1/1:5,22:26:10.60:239,11,0	0/1:23,0:23:57.35:57,0,399	0/0:26,0:26:31.30:0,31,374	0/1:32,0:32:40.70:41,0,680	1/1:37,0:37:22.54:156,23,0	1/1:19,0:19:13.26:86,13,0	0/1:38,0:37:20.69:51,0,21	0/0:33,0:33:43.28:0,43,604	0/1:41,0:40:53.22:53,0,1069	0/0:20,0:19:9.97:0,10,618	0/1:26,0:25:91.16:91,0,508
chr10	77848339	.	TGC	T	5343.99	PASS	AB=1.000;AC=51;AF=0.981;AN=52;BaseQRankSum=8.501;DP=689;FS=6.486;HRun=0;HaplotypeScore=184.5923;InbreedingCoeff=-0.0374;MQ=52.77;MQ0=15;MQRankSum=-2.350;QD=8.05;ReadPosRankSum=2.165;VQSLOD=4.2428;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:53,0:53:21.37:21,0,682	1/1:3,5:9:3.01:36,3,0	./.	./.	1/1:10,25:34:30.09:353,30,0	1/1:14,5:22:41.43:337,41,0	1/1:20,4:25:38.76:334,39,0	1/1:21,0:21:5.64:44,6,0	1/1:12,1:14:14.80:116,15,0	1/1:16,17:34:47.78:435,48,0	1/1:14,4:18:23.98:232,24,0	1/1:17,0:21:23.88:195,24,0	1/1:9,0:18:17.64:141,18,0	1/1:23,5:28:29.85:284,30,0	1/1:16,0:16:3:25,3,0	1/1:10,1:11:8.98:80,9,0	1/1:16,28:43:30.09:355,30,0	1/1:24,0:23:8.83:63,9,0	1/1:14,0:22:20.87:168,21,0	1/1:5,16:22:15.04:177,15,0	1/1:26,3:29:41.87:366,42,0	1/1:27,0:30:23.79:180,24,0	1/1:14,1:19:14.35:110,14,0	1/1:32,1:35:17.61:117,18,0	1/1:10,20:31:18.05:213,18,0	1/1:19,20:38:59.48:467,59,0	1/1:15,3:18:20.82:186,21,0	1/1:20,2:21:38.52:311,39,0
chr10	77848689	.	ACAT	A	1988.26	PASS	AB=1.000;AC=13;AF=0.250;AN=52;BaseQRankSum=-0.045;DP=743;FS=26.326;HRun=0;HaplotypeScore=197.3453;InbreedingCoeff=0.7018;MQ=70.32;MQ0=3;MQRankSum=5.387;QD=10.81;ReadPosRankSum=0.610;VQSLOD=1.7876;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:33.09:0,33,579	0/0:12,0:12:9.02:0,9,109	./.	./.	0/0:35,0:35:5.51:0,6,96	0/0:24,0:29:12.04:0,12,170	0/1:27,0:26:0.07:0,0,0	0/0:27,0:27:0:0,0,0	0/0:21,0:30:9.03:0,9,118	0/0:42,0:41:66.17:0,66,928	0/0:14,0:14:3.01:0,3,44	1/1:19,18:38:48.12:602,48,0	1/1:16,17:33:60.19:776,60,0	0/0:27,0:27:9.03:0,9,130	0/0:25,0:36:12.04:0,12,174	0/0:19,0:25:12.04:0,12,184	0/0:22,0:27:3.01:0,3,39	1/1:16,10:26:25.27:327,25,0	0/0:17,0:17:3.01:0,3,39	0/0:21,0:21:5.93:0,6,90	0/0:20,0:20:2.49:0,2,142	1/1:8,8:16:12.04:155,12,0	1/1:20,5:25:5.71:77,6,0	1/1:11,7:19:17.96:215,18,0	0/0:34,0:34:18.02:0,18,191	0/0:32,0:31:48.11:0,48,679	0/0:29,0:35:24.08:0,24,343	0/0:16,0:17:15.01:0,15,184
chr10	77868135	.	T	TAC	824.23	PASS	AB=0.918;AC=26;AF=0.481;AN=54;BaseQRankSum=-0.660;DP=302;FS=23.140;HRun=0;HaplotypeScore=162.4079;InbreedingCoeff=0.2632;MQ=62.56;MQ0=4;MQRankSum=-1.348;QD=4.66;ReadPosRankSum=2.105;VQSLOD=1.5356;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:2.23:0,2,9	0/1:8,1:9:8.82:34,0,9	0/1:19,0:11:31.75:32,0,80	0/0:16,0:7:9.20:0,9,92	1/1:12,3:15:0.36:4,0,0	0/1:6,1:7:0.01:0,0,0	1/1:4,3:7:1.74:5,2,0	0/1:8,0:5:14.46:28,0,14	0/0:10,2:12:4.91:0,5,22	1/1:19,2:20:27.64:379,28,0	0/0:7,2:9:1.55:0,2,4	0/0:10,0:10:1.25:0,1,5	0/0:6,0:6:1.72:0,2,4	0/0:9,5:14:0.98:0,1,2	0/1:5,4:9:0.13:0,0,0	1/1:10,3:13:0.82:38,1,0	1/1:2,3:5:3.01:40,3,0	0/0:8,0:8:9.80:0,10,44	1/1:1,1:1:3.01:44,3,0	0/0:13,5:18:1.14:0,1,5	0/0:7,3:9:1.66:0,2,3	0/1:13,0:13:0.70:3,0,1	0/1:7,0:7:0.05:0,0,0	./.	1/1:11,3:14:1.91:6,2,0	1/1:10,5:13:13.99:248,14,0	1/1:4,1:5:8.06:90,8,0	0/1:6,1:7:1.47:1,0,2
chr10	77868138	.	ACG	A	448.65	PASS	AB=0.883;AC=28;AF=0.519;AN=54;BaseQRankSum=-0.463;DP=299;FS=23.567;HRun=0;HaplotypeScore=163.3308;InbreedingCoeff=0.1330;MQ=61.11;MQ0=4;MQRankSum=-2.556;QD=2.11;ReadPosRankSum=-2.752;VQSLOD=0.4676;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:2.99:13,3,0	0/1:6,3:9:3.51:4,0,6	0/1:18,0:11:16.96:17,0,90	0/0:16,0:7:8.08:0,8,130	1/1:10,5:15:2.37:7,2,0	0/1:5,2:7:0:0,0,0	0/0:6,1:7:1.67:0,2,5	0/1:7,1:5:2.87:29,0,3	0/0:11,1:12:4.30:0,4,22	1/1:12,9:20:3.38:193,3,0	1/1:3,6:9:2.50:11,2,0	0/1:10,0:10:2.02:25,0,2	1/1:6,0:6:2.54:31,3,0	0/0:12,2:14:0.02:0,0,1	0/1:6,3:9:0:0,0,0	0/0:11,2:13:5.13:0,5,23	0/0:5,0:5:2.32:0,2,8	0/1:8,0:8:30.20:82,0,30	0/0:2,0:1:1.82:0,2,5	1/1:12,5:17:3.04:13,3,0	0/1:10,0:9:0.15:0,0,0	0/0:12,1:13:0.34:0,0,3	0/1:6,1:7:0.13:0,0,0	./.	1/1:7,7:14:2.22:7,2,0	0/1:11,3:13:13.82:77,0,14	1/1:3,2:5:1.47:33,1,0	1/1:3,4:7:3:27,3,0
chr10	77868167	.	T	TAC	1602.75	PASS	AB=0.946;AC=20;AF=0.370;AN=54;BaseQRankSum=7.487;DP=612;FS=32.126;HRun=0;HaplotypeScore=333.4693;InbreedingCoeff=-0.6099;MQ=41.32;MQ0=9;MQRankSum=-4.538;QD=3.63;ReadPosRankSum=1.009;VQSLOD=1.3125;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:48.11:0,48,609	0/1:15,0:15:33.46:33,0,102	0/0:36,1:8:11.92:0,12,118	0/0:27,0:8:9.03:0,9,104	0/0:26,0:26:9.64:0,10,306	0/1:20,0:20:35.35:35,0,275	0/1:18,0:18:99:139,0,112	0/1:25,0:22:21.67:22,0,456	0/1:15,0:15:45.38:45,0,96	0/1:45,0:43:99:172,0,642	0/1:20,0:19:33.70:34,0,98	0/1:10,7:17:17.92:266,0,18	0/1:12,3:15:12.85:131,0,13	0/1:24,0:25:99:110,0,138	0/1:18,0:20:64.26:64,0,138	0/1:21,0:22:37.02:37,0,273	0/0:6,0:6:12.04:0,12,145	0/1:17,0:20:99:101,0,285	0/1:15,0:13:65.53:66,0,234	0/1:34,0:34:99:110,0,283	0/0:25,0:23:10.51:0,11,289	0/1:17,3:20:11.22:136,0,11	0/1:11,7:18:30.11:61,0,30	./.	0/1:34,0:31:14.34:14,0,181	0/1:29,0:27:99:152,0,384	0/1:15,0:15:25.80:26,0,207	0/0:14,0:14:1.85:0,2,143
chr10	77868186	.	ACG	A	1607.41	PASS	AB=0.911;AC=25;AF=0.463;AN=54;BaseQRankSum=7.589;DP=681;FS=26.514;HRun=0;HaplotypeScore=333.7187;InbreedingCoeff=-0.7282;MQ=35.31;MQ0=15;MQRankSum=-5.599;QD=2.86;ReadPosRankSum=-3.439;VQSLOD=1.0378;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:29:33.73:0,34,348	0/1:18,1:19:25.73:47,0,26	0/0:46,0:3:5.72:0,6,30	0/0:34,0:6:2:0,2,12	0/1:19,6:25:18.50:18,0,70	0/1:22,0:22:51.58:52,0,155	0/1:19,1:20:19.35:19,0,69	0/1:30,0:26:14.30:14,0,304	0/1:16,0:16:21.54:22,0,56	0/1:40,6:45:99:461,0,327	0/1:25,2:26:16.58:17,0,35	0/1:12,10:22:35.75:118,0,36	0/1:5,11:16:53.78:141,0,54	0/1:24,1:25:53.71:54,0,79	0/1:21,0:22:50.08:50,0,70	0/1:22,1:23:2.34:2,0,144	0/1:9,0:9:6.02:6,0,68	0/1:19,0:20:99:116,0,153	0/1:18,0:16:40.56:41,0,79	0/1:33,1:34:69.17:108,0,69	0/1:27,1:25:29.74:30,0,128	0/1:18,4:22:16.55:32,0,17	1/1:19,3:22:1.34:56,1,0	./.	0/1:28,6:31:42.42:42,0,64	0/1:29,2:29:99:245,0,133	0/1:13,4:17:5.86:6,0,164	0/1:13,1:13:43.70:56,0,44
chr10	77868213	.	T	TACACACAC	2303.91	PASS	AB=1.000;AC=47;AF=0.904;AN=52;BaseQRankSum=-3.586;DP=765;FS=9.106;HRun=0;HaplotypeScore=362.7654;InbreedingCoeff=0.3079;MQ=31.74;MQ0=31;MQRankSum=0.453;QD=3.66;ReadPosRankSum=3.024;VQSLOD=0.5287;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:7.37:0,7,376	1/1:15,0:15:2.56:20,3,0	./.	./.	0/1:28,0:28:0.02:3,0,0	1/1:23,0:24:10.36:114,10,0	1/1:18,0:18:2.01:21,2,0	1/1:27,0:21:10.10:59,10,0	1/1:21,0:21:10.67:122,11,0	1/1:49,0:46:28.69:214,29,0	1/1:24,0:23:2.64:38,3,0	1/1:29,0:28:2.64:24,3,0	1/1:21,0:21:11.45:91,11,0	1/1:36,0:36:20.19:158,20,0	1/1:23,0:23:11.20:132,11,0	1/1:26,0:26:10.78:84,11,0	1/1:14,0:13:8.96:90,9,0	1/1:22,0:22:2.64:144,3,0	1/1:23,1:19:13.56:249,14,0	1/1:36,0:36:7.60:163,8,0	1/1:50,0:42:24.09:248,24,0	0/0:23,0:23:1.77:0,2,6	1/1:27,0:25:0.29:27,0,0	1/1:18,0:16:2.29:6,2,0	1/1:30,5:34:6.13:156,6,0	1/1:26,0:24:10.75:149,11,0	1/1:19,0:19:11.25:81,11,0	1/1:13,0:11:3.78:10,4,0
chr10	77868604	.	TG	T	1544.31	PASS	AB=0.982;AC=26;AF=0.464;AN=56;BaseQRankSum=2.604;DP=543;FS=2.128;HRun=4;HaplotypeScore=94.9421;InbreedingCoeff=0.0099;MQ=75.66;MQ0=1;MQRankSum=-3.583;QD=4.06;ReadPosRankSum=-1.007;VQSLOD=-0.3831;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.13:0,87,1116	0/1:9,1:10:12.02:12,0,54	0/0:15,0:14:29.60:0,30,345	0/0:12,0:12:26.97:0,27,268	0/1:27,1:28:85.43:98,0,85	0/0:20,1:21:7.25:0,7,94	0/1:21,1:22:25.90:26,0,75	0/1:26,0:26:52.93:85,0,53	0/1:23,0:23:2.74:3,0,90	0/1:21,1:22:40.52:59,0,41	0/0:14,0:14:16.85:0,17,78	1/1:16,0:16:45.59:241,46,0	1/1:19,1:20:44.14:207,44,0	0/1:17,0:17:63.59:77,0,64	0/1:28,0:28:62.82:63,0,79	0/1:21,0:21:52.61:77,0,53	0/1:18,0:18:30.02:30,0,71	1/1:14,1:15:30.12:145,30,0	0/1:19,0:19:42.62:43,0,47	0/0:25,0:25:46.80:0,47,181	0/1:25,1:26:60.22:60,0,72	1/1:14,1:15:29.81:180,30,0	1/1:12,1:13:26.57:133,27,0	1/1:12,1:13:28.14:145,28,0	0/0:15,0:15:11.86:0,12,107	0/0:31,1:32:2.45:0,2,113	0/1:23,0:23:41.12:41,0,70	0/1:5,0:5:1.30:1,0,22
chr10	77868607	.	G	GA	2097.94	PASS	AB=0.833;AC=13;AF=0.232;AN=56;BaseQRankSum=-3.246;DP=562;FS=9.223;HRun=0;HaplotypeScore=99.0760;InbreedingCoeff=0.8684;MQ=75.32;MQ0=1;MQRankSum=-1.384;QD=19.98;ReadPosRankSum=2.884;VQSLOD=5.4350;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.25:0,93,1235	0/0:10,0:10:28.59:0,29,161	0/0:15,0:14:9.80:0,10,345	0/0:13,0:13:32.79:0,33,362	0/0:31,0:31:39.85:0,40,314	0/0:21,0:21:55.92:0,56,294	0/0:22,1:23:28.35:0,28,261	0/0:25,0:25:31.87:0,32,251	0/0:25,0:25:47.23:0,47,315	0/0:22,0:22:35.06:0,35,221	0/0:12,1:13:5.41:0,5,149	1/1:2,15:17:40.61:448,41,0	1/1:2,20:22:51.07:525,51,0	0/0:17,0:17:38.71:0,39,201	0/0:28,0:28:48.77:0,49,323	0/0:20,0:20:23.46:0,23,217	0/0:19,0:19:48.28:0,48,262	1/1:3,15:18:27.59:320,28,0	0/0:19,0:19:45.34:0,45,221	0/0:25,1:26:33.28:0,33,332	0/0:23,0:23:56.57:0,57,292	1/1:3,13:16:21.87:323,22,0	1/1:2,12:14:22.26:362,22,0	1/1:2,11:13:25.85:291,26,0	0/0:20,0:20:44.90:0,45,261	0/0:31,1:32:29.51:0,30,340	0/0:22,1:23:25.47:0,25,265	0/1:4,1:5:18.31:18,0,54
chr10	77868783	.	GT	G	2464.30	PASS	AB=0.709;AC=21;AF=0.375;AN=56;BaseQRankSum=5.614;DP=547;FS=1.700;HRun=13;HaplotypeScore=70.9895;InbreedingCoeff=0.4036;MQ=78.09;MQ0=4;MQRankSum=-0.305;QD=8.68;ReadPosRankSum=2.325;VQSLOD=3.0383;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,1:20:20.14:0,20,348	1/1:1,4:5:11.93:88,12,0	0/1:35,1:25:5.89:6,0,121	0/0:30,0:16:3.53:0,4,96	0/1:15,13:28:35.30:236,0,35	0/0:18,0:19:46.16:0,46,426	0/0:10,0:11:29.86:0,30,270	0/0:24,0:25:51.23:0,51,468	0/0:8,1:9:2.13:0,2,182	1/1:12,22:34:11.28:394,11,0	0/1:6,13:19:7.19:221,0,7	1/1:3,4:7:6.06:95,6,0	1/1:6,15:22:26.52:348,27,0	1/1:7,9:16:8.62:217,9,0	0/0:9,1:13:4.77:0,5,197	0/0:15,1:16:13.35:0,13,272	0/0:28,1:30:53.04:0,53,658	0/0:6,0:24:43.05:0,43,248	0/0:18,0:18:32.89:0,33,306	0/0:23,0:23:36.91:0,37,348	0/0:6,0:6:15.02:0,15,146	1/1:2,3:5:8.91:66,9,0	0/1:6,12:18:15.05:202,0,15	1/1:1,14:15:9.61:233,10,0	0/0:16,1:17:12.72:0,13,344	0/1:8,13:22:1.73:263,0,2	0/1:23,5:29:45:45,0,515	0/1:11,11:25:34.31:236,0,34
chr10	77869658	.	T	TTA	133.19	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-0.742;DP=297;FS=3.403;HRun=0;HaplotypeScore=39.8896;InbreedingCoeff=0.3117;MQ=72.02;MQ0=1;MQRankSum=-0.603;QD=8.88;ReadPosRankSum=0.018;VQSLOD=2.4183;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:33.11:0,33,413	0/0:3,0:3:6.02:0,6,75	0/0:6,0:6:2.59:0,3,32	0/1:11,0:8:13.98:34,0,14	0/0:17,0:17:45.14:0,45,563	0/0:15,0:15:36.11:0,36,450	0/0:9,0:9:18.04:0,18,211	0/0:44,0:44:90.28:0,90,1123	0/0:5,0:5:9.03:0,9,113	0/0:14,0:14:39.12:0,39,488	0/0:10,0:10:21.07:0,21,263	0/0:5,0:5:12.04:0,12,150	0/0:12,0:13:20.26:0,20,328	1/1:0,4:4:12.04:198,12,0	0/0:2,0:2:6.02:0,6,75	0/0:8,0:9:23.91:0,24,276	0/0:18,0:18:48.15:0,48,600	0/0:22,0:22:54.17:0,54,675	0/0:14,0:14:36.11:0,36,437	0/0:9,0:11:14.88:0,15,164	0/0:3,0:3:3.01:0,3,38	0/0:2,0:2:3.01:0,3,38	0/0:3,0:3:6.02:0,6,75	0/0:3,0:3:3.01:0,3,38	0/0:9,0:9:21.07:0,21,263	0/0:14,0:14:36.10:0,36,438	0/0:9,0:9:24.08:0,24,300	0/0:6,0:6:15.03:0,15,173
chr10	77870647	.	CCCCAG	C	329.54	PASS	AC=18;AF=0.750;AN=24;BaseQRankSum=4.113;DP=35;FS=6.701;HRun=0;HaplotypeScore=61.5831;InbreedingCoeff=0.3799;MQ=150.39;MQ0=2;MQRankSum=-3.534;QD=29.96;ReadPosRankSum=3.998;VQSLOD=2.5652;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:9,0:6:8.67:0,9,159	0/0:13,0:12:26.32:0,26,467	1/1:0,1:1:3.01:39,3,0	1/1:0,1:1:3.01:46,3,0	0/0:0,1:1:0:0,0,0	./.	1/1:0,1:1:3.01:38,3,0	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:42,3,0	1/1:1,2:3:9.03:112,9,0	./.	./.	./.	1/1:0,1:1:3.01:39,3,0	1/1:0,1:1:3.01:40,3,0	1/1:1,0:1:3.01:33,3,0	1/1:0,1:1:3.01:38,3,0	./.	./.	./.	./.	./.
chr10	77870654	.	A	AGGGGGG	8428.22	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=1.755;DP=149;FS=61.408;HRun=0;HaplotypeScore=108.4206;InbreedingCoeff=0.5326;MQ=74.68;MQ0=2;MQRankSum=-4.970;QD=67.43;ReadPosRankSum=-0.105;VQSLOD=2.8315;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:15.05:402,15,0	1/1:4,0:4:12.04:335,12,0	0/0:7,0:4:6.46:0,6,63	0/0:9,0:8:20.08:0,20,257	1/1:4,1:5:6.02:185,6,0	1/1:5,1:6:18.06:545,18,0	1/1:7,1:8:23.75:528,24,0	1/1:10,0:10:24.05:566,24,0	1/1:6,1:7:18.06:443,18,0	1/1:4,0:4:6.02:123,6,0	1/1:5,0:5:9.03:293,9,0	./.	1/1:4,0:4:12.04:296,12,0	1/1:6,0:6:15.01:360,15,0	1/1:4,1:5:15.05:457,15,0	1/1:8,2:10:23.88:677,24,0	1/1:5,0:5:15.05:374,15,0	1/1:1,0:1:3.01:105,3,0	1/1:3,0:3:6.02:120,6,0	1/1:5,1:6:18.06:487,18,0	1/1:3,1:4:9.03:291,9,0	1/1:4,0:4:9.03:288,9,0	1/1:2,1:3:9.03:286,9,0	1/1:2,0:2:3.01:59,3,0	1/1:5,0:5:11.91:290,12,0	1/1:4,0:4:12.04:371,12,0	1/1:5,0:5:15.05:403,15,0	1/1:2,0:2:6.02:145,6,0
chr10	77870659	.	T	TA	4030.38	PASS	AB=1.000;AC=50;AF=0.962;AN=52;BaseQRankSum=-3.457;DP=153;FS=24.894;HRun=2;HaplotypeScore=60.0871;InbreedingCoeff=0.0057;MQ=82.02;MQ0=2;MQRankSum=-4.175;QD=28.38;ReadPosRankSum=0.966;VQSLOD=1.9404;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:15.04:171,15,0	1/1:0,4:4:12.04:141,12,0	0/1:7,0:4:0.98:25,0,1	0/1:12,0:11:8:8,0,102	1/1:0,5:5:12.04:145,12,0	1/1:0,6:6:18.05:214,18,0	1/1:0,8:8:6.89:137,7,0	1/1:0,10:10:30.10:417,30,0	1/1:0,7:7:18.05:215,18,0	1/1:0,4:4:9.03:126,9,0	1/1:0,5:5:6.02:68,6,0	./.	1/1:0,4:4:8.99:94,9,0	1/1:0,6:6:18.06:220,18,0	1/1:0,5:5:15.04:179,15,0	1/1:1,9:10:30.09:373,30,0	1/1:0,5:5:12.04:156,12,0	1/1:0,1:1:3.01:42,3,0	1/1:0,3:3:9.03:127,9,0	1/1:0,6:6:18.06:219,18,0	1/1:0,4:4:9.03:107,9,0	1/1:0,4:4:12.04:148,12,0	1/1:0,3:3:9.03:111,9,0	./.	1/1:0,5:5:15.05:179,15,0	1/1:0,4:4:12.04:169,12,0	1/1:0,5:5:12.04:160,12,0	1/1:0,2:2:6.02:79,6,0
chr10	77870664	.	C	CA	4096.99	PASS	AB=1.000;AC=52;AF=0.963;AN=54;BaseQRankSum=-2.718;DP=163;FS=22.731;HRun=2;HaplotypeScore=62.6473;InbreedingCoeff=-0.0814;MQ=87.48;MQ0=2;MQRankSum=-4.090;QD=25.45;ReadPosRankSum=3.791;VQSLOD=2.1327;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:14.64:156,15,0	1/1:4,0:4:12.03:127,12,0	1/1:7,0:6:2.29:139,2,0	0/1:13,0:12:38.80:39,0,140	1/1:5,0:5:11.23:141,11,0	1/1:6,0:6:18.05:201,18,0	1/1:9,0:9:10.86:155,11,0	1/1:10,0:10:30.10:394,30,0	1/1:7,0:7:18.05:203,18,0	1/1:4,0:4:9.03:120,9,0	1/1:5,0:5:7.38:77,7,0	1/1:0,10:10:3.01:43,3,0	1/1:4,0:4:9.01:99,9,0	1/1:7,0:7:21.05:234,21,0	1/1:6,0:6:15.03:161,15,0	1/1:11,0:11:33.09:392,33,0	1/1:5,0:5:11.64:146,12,0	1/1:1,0:1:3.01:40,3,0	1/1:3,0:3:9.03:120,9,0	1/1:6,0:6:18.05:211,18,0	1/1:7,0:7:11.99:123,12,0	1/1:4,0:4:12.03:134,12,0	1/1:3,0:3:9.02:100,9,0	./.	1/1:6,0:6:18.04:190,18,0	1/1:4,0:4:12.04:157,12,0	0/1:5,0:5:2.70:123,0,3	1/1:2,0:2:6.02:73,6,0
chr10	77870666	.	T	TG	4140.23	PASS	AB=0.875;AC=53;AF=0.981;AN=54;BaseQRankSum=0.096;DP=193;FS=16.836;HRun=0;HaplotypeScore=71.6523;InbreedingCoeff=-0.0724;MQ=85.86;MQ0=1;MQRankSum=-1.241;QD=21.68;ReadPosRankSum=3.227;VQSLOD=4.0952;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:15.10:166,15,0	1/1:4,0:4:12.02:120,12,0	1/1:4,3:7:14.80:145,15,0	0/1:11,1:13:44.17:44,0,123	1/1:7,0:7:7.74:129,8,0	1/1:6,0:6:18.04:189,18,0	1/1:9,0:9:7.16:145,7,0	1/1:12,0:12:36.02:430,36,0	1/1:7,0:7:18.04:192,18,0	1/1:6,0:6:12.44:140,12,0	1/1:6,0:6:4.71:66,5,0	1/1:10,0:10:3.01:40,3,0	1/1:5,0:5:10.90:125,11,0	1/1:9,0:9:23.98:242,24,0	1/1:6,0:6:15.50:154,15,0	1/1:13,0:13:34.51:393,35,0	1/1:7,0:7:8.26:135,8,0	1/1:3,0:3:3.01:39,3,0	1/1:6,0:6:15:164,15,0	1/1:6,0:6:18.04:200,18,0	1/1:8,0:8:11.32:117,11,0	1/1:5,0:5:9.16:124,9,0	1/1:5,0:5:7.24:90,7,0	./.	1/1:8,0:8:15.41:181,15,0	1/1:6,0:6:12.51:157,13,0	1/1:5,0:5:1.58:120,2,0	1/1:3,0:3:9.01:94,9,0
chr10	77870783	.	GA	G	327.99	PASS	AB=0.933;AC=4;AF=0.071;AN=56;BaseQRankSum=5.127;DP=432;FS=14.704;HRun=10;HaplotypeScore=45.7362;InbreedingCoeff=0.4839;MQ=71.46;MQ0=0;MQRankSum=0.958;QD=6.98;ReadPosRankSum=0.326;VQSLOD=0.2038;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:63.15:0,63,686	0/0:8,0:8:24.04:0,24,254	0/1:12,1:12:15.18:15,0,153	0/1:14,1:13:2.06:2,0,182	0/0:15,0:17:44.77:0,45,447	0/0:10,0:10:30.08:0,30,332	0/0:21,0:21:60.15:0,60,655	0/0:30,1:31:58.18:0,58,869	0/0:15,0:15:45.09:0,45,479	0/0:14,0:14:36.10:0,36,398	0/0:10,0:10:27.07:0,27,299	0/0:13,0:14:26.91:0,27,280	0/0:12,0:12:36.06:0,36,385	0/0:18,1:20:30.92:0,31,544	0/0:21,0:22:37.05:0,37,619	0/0:11,2:13:7.01:0,7,295	0/0:15,0:17:41.76:0,42,418	1/1:1,18:19:47.98:417,48,0	0/0:16,1:17:22.02:0,22,448	0/0:13,1:15:12.88:0,13,353	0/0:15,0:15:33.09:0,33,365	0/0:14,0:14:39.09:0,39,421	0/0:9,0:10:20.89:0,21,213	0/0:10,0:10:21.06:0,21,232	0/0:15,0:16:47.96:0,48,512	0/0:15,0:15:39.07:0,39,419	0/0:16,0:16:47.95:0,48,504	0/0:6,0:6:18.05:0,18,199
chr10	77872599	.	C	CAT	3669.54	PASS	AB=1.000;AC=37;AF=0.771;AN=48;BaseQRankSum=-7.335;DP=184;FS=0.789;HRun=0;HaplotypeScore=21.8824;InbreedingCoeff=0.6102;MQ=79.56;MQ0=0;MQRankSum=-2.449;QD=29.12;ReadPosRankSum=-1.220;VQSLOD=3.7534;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:9.03:0,9,115	1/1:0,2:2:3.01:50,3,0	0/1:3,0:2:0:0,0,0	0/0:19,0:9:9.48:0,9,93	1/1:3,2:5:6.02:86,6,0	1/1:0,2:2:6.02:100,6,0	1/1:2,0:2:3.01:50,3,0	1/1:11,20:32:63.18:1003,63,0	1/1:0,3:3:6.02:100,6,0	1/1:1,5:6:15.05:251,15,0	./.	0/0:6,0:6:15.05:0,15,190	0/0:6,0:6:18.06:0,18,228	1/1:0,1:1:3.01:50,3,0	1/1:0,3:3:3.01:50,3,0	1/1:3,0:3:3.01:43,3,0	1/1:0,14:15:39.12:629,39,0	0/0:19,0:19:51.16:0,51,649	1/1:0,1:1:3.01:50,3,0	1/1:5,1:6:9.03:151,9,0	1/1:2,5:7:6.02:100,6,0	./.	./.	./.	1/1:3,5:8:9.03:151,9,0	1/1:5,2:7:6.02:100,6,0	1/1:3,10:13:21.07:352,21,0	1/1:0,7:7:21.07:351,21,0
chr10	77874882	.	A	ACATATAAG	19690.04	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-0.527;DP=677;FS=1.044;HRun=0;HaplotypeScore=170.1707;InbreedingCoeff=0.9993;MQ=84.65;MQ0=0;MQRankSum=-18.037;QD=97.48;ReadPosRankSum=-4.149;VQSLOD=4.5631;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,2782	0/0:15,0:15:42.14:0,42,1188	0/0:22,0:22:60.16:0,60,1426	0/0:29,0:29:78.27:0,78,2106	0/0:31,0:31:93.30:0,93,2524	0/0:27,0:27:78.27:0,78,2151	0/0:22,0:22:54.19:0,54,1528	0/0:34,0:34:96.32:0,96,2541	0/0:20,0:20:60.21:0,60,1698	0/0:33,0:33:87.30:0,87,2429	0/0:20,0:20:57.20:0,57,1589	1/1:14,12:30:75.26:2864,75,0	1/1:5,8:15:36.12:1431,36,0	0/0:21,0:21:60.21:0,60,1626	0/0:39,0:39:99:0,114,3130	0/0:26,0:26:78.27:0,78,2202	0/0:26,0:26:69.24:0,69,1915	0/0:21,0:21:53.75:0,54,1484	1/1:9,8:20:60.21:2181,60,0	1/1:6,18:27:75.25:2717,75,0	1/1:9,3:14:33.11:1265,33,0	1/1:5,11:17:42.14:1679,42,0	1/1:7,15:24:60.20:2437,60,0	1/1:9,9:19:35.65:1230,36,0	0/0:22,0:22:57.20:0,57,1606	0/0:25,0:25:75.25:0,75,2064	1/1:6,26:36:90.31:3887,90,0	0/0:7,0:7:21.07:0,21,513
chr10	77875906	.	T	TC	2827.47	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-7.808;DP=688;FS=3.068;HRun=8;HaplotypeScore=78.2818;InbreedingCoeff=0.9912;MQ=82.21;MQ0=4;MQRankSum=-0.855;QD=23.18;ReadPosRankSum=2.170;VQSLOD=4.4091;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:65.99:0,66,596	1/1:3,9:12:21.06:238,21,0	0/0:47,0:36:24.88:0,25,449	0/0:47,0:32:42.46:0,42,343	1/1:3,18:21:35.50:633,35,0	0/0:22,0:22:57.01:0,57,517	0/0:22,0:22:54.01:0,54,487	0/0:32,0:32:75.03:0,75,687	0/0:15,0:15:39:0,39,349	1/1:7,16:23:48.12:536,48,0	1/1:3,9:12:22.85:281,23,0	0/0:23,0:23:57.02:0,57,521	0/0:24,0:24:62.99:0,63,566	1/1:6,16:22:39.12:450,39,0	0/0:18,0:18:42.01:0,42,384	0/0:33,0:33:92.93:0,93,824	0/0:33,0:33:83.90:0,84,740	0/0:32,0:32:96.05:0,96,878	0/0:29,0:29:65.81:0,66,584	0/0:16,0:16:39:0,39,351	0/0:30,0:30:75.02:0,75,684	0/0:18,0:18:50.39:0,50,445	0/0:16,0:16:11.95:0,12,336	0/0:27,0:27:66.01:0,66,604	0/0:22,0:22:55.83:0,56,498	1/1:2,23:25:60.15:679,60,0	0/0:30,0:30:80.96:0,81,726	1/1:1,6:7:18.05:208,18,0
chr10	77877560	.	AT	A	8791.64	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=19.345;DP=708;FS=8.253;HRun=8;HaplotypeScore=99.4286;InbreedingCoeff=0.9977;MQ=78.59;MQ0=0;MQRankSum=-2.883;QD=25.26;ReadPosRankSum=2.226;VQSLOD=4.9525;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.14:0,81,957	0/0:6,0:6:15.05:0,15,181	0/0:24,0:24:40.79:0,41,487	0/0:17,0:17:43.36:0,43,482	0/0:31,0:31:90.27:0,90,1077	1/1:0,24:24:60.10:579,60,0	1/1:2,24:26:72.09:695,72,0	1/1:3,32:35:72.60:895,73,0	1/1:2,14:16:36.05:348,36,0	0/0:21,0:21:45.14:0,45,544	0/0:26,0:26:72.22:0,72,869	1/1:1,30:31:84.13:811,84,0	1/1:6,29:35:81.06:782,81,0	0/0:24,1:25:46.25:0,46,841	1/1:1,28:29:81.13:782,81,0	1/1:2,29:31:75.10:724,75,0	1/1:1,22:23:60.09:579,60,0	0/0:18,0:18:48.15:0,48,579	0/0:25,0:25:54.64:0,55,653	0/0:18,0:19:57.03:0,57,655	0/0:30,0:30:84.26:0,84,1014	1/1:1,19:20:54.08:520,54,0	1/1:0,22:22:57.09:549,57,0	1/1:2,31:33:96.12:920,96,0	1/1:2,21:23:63.08:608,63,0	0/0:39,0:39:99:0,111,1330	0/0:37,0:37:99:0,105,1240	0/0:12,0:12:30.09:0,30,362
chr10	77879107	.	G	GCA	10818.98	PASS	AB=0.685;AC=28;AF=0.500;AN=56;BaseQRankSum=-13.229;DP=666;FS=3.515;HRun=0;HaplotypeScore=75.3332;InbreedingCoeff=0.6945;MQ=62.08;MQ0=8;MQRankSum=1.148;QD=29.40;ReadPosRankSum=0.274;VQSLOD=6.3180;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:87.19:0,87,1019	1/1:4,10:15:30.10:470,30,0	0/0:37,0:8:2.98:0,3,37	0/1:20,0:6:32.97:33,0,46	1/1:2,27:29:78.27:1262,78,0	1/1:4,21:27:54.18:875,54,0	0/1:8,10:18:9.58:362,0,10	1/1:9,26:37:87.19:1316,87,0	1/1:6,19:25:36.12:582,36,0	1/1:6,17:23:17.47:763,17,0	1/1:5,21:25:57.19:923,57,0	0/0:20,0:21:50.99:0,51,600	0/0:15,0:15:36.10:0,36,427	1/1:9,16:25:42.14:675,42,0	1/1:9,14:24:24.08:389,24,0	1/1:4,26:30:32.28:849,32,0	0/1:5,17:21:34.15:496,0,34	0/0:24,0:25:32.97:0,33,597	0/0:17,0:17:39.12:0,39,477	0/0:28,0:28:72.23:0,72,880	0/0:32,0:33:60:0,60,698	0/0:10,0:11:21.07:0,21,257	0/0:19,0:20:53.99:0,54,625	0/0:20,0:20:36.07:0,36,423	0/1:2,15:17:28.05:588,0,28	1/1:6,16:22:26.50:893,27,0	0/0:30,0:30:78.21:0,78,928	1/1:1,7:8:21.07:341,21,0
chr10	77879481	.	A	AT	5857.34	PASS	AB=0.586;AC=23;AF=0.411;AN=56;BaseQRankSum=-9.462;DP=682;FS=10.614;HRun=10;HaplotypeScore=88.5015;InbreedingCoeff=0.9165;MQ=81.57;MQ0=0;MQRankSum=-1.006;QD=20.92;ReadPosRankSum=1.143;VQSLOD=5.0560;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:85.91:0,86,692	1/1:2,14:16:17.46:391,17,0	0/0:26,0:26:46.31:0,46,384	0/0:12,0:12:18.69:0,19,99	1/1:7,30:37:31.81:713,32,0	0/0:26,0:27:70.95:0,71,572	0/0:28,0:28:71.91:0,72,591	0/0:29,1:30:24.87:0,25,411	0/0:25,0:25:62.88:0,63,514	1/1:11,22:34:34.67:609,35,0	1/1:7,17:24:23.32:414,23,0	1/1:3,16:19:48.12:512,48,0	1/1:8,21:30:31.66:577,32,0	1/1:3,27:30:66.17:704,66,0	0/0:22,0:24:63.96:0,64,501	0/0:23,0:24:67.95:0,68,545	0/0:22,0:22:50.89:0,51,414	0/0:1,0:12:22.41:0,22,65	0/0:21,0:22:37.94:0,38,294	0/0:38,0:38:98.88:0,99,813	0/0:18,0:18:41.93:0,42,345	1/1:2,14:16:11.41:315,11,0	1/1:2,16:18:17.46:391,17,0	0/1:5,12:17:28.65:310,0,29	0/0:25,0:25:62.89:0,63,517	1/1:7,15:22:45.11:480,45,0	0/0:36,1:37:60.76:0,61,692	1/1:3,14:17:42.10:442,42,0
chr10	77880031	.	C	CAA	7340.81	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-11.605;DP=758;FS=0.000;HRun=9;HaplotypeScore=90.6257;InbreedingCoeff=0.9685;MQ=80.43;MQ0=0;MQRankSum=-1.365;QD=30.21;ReadPosRankSum=-2.012;VQSLOD=4.5772;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:53:99:0,153,1597	0/0:10,0:10:24.02:0,24,245	0/0:19,0:19:32.29:0,32,281	0/0:22,0:22:2.06:0,2,299	0/0:27,0:27:66.10:0,66,702	1/1:6,18:27:54.17:796,54,0	1/1:2,24:28:56.67:823,57,0	1/1:12,26:38:82.48:1189,82,0	1/1:2,27:29:69.23:1062,69,0	0/0:37,0:38:98.97:0,99,1027	0/0:25,0:25:63.13:0,63,671	0/0:30,0:31:75.13:0,75,846	0/0:31,0:31:87.20:0,87,926	0/0:27,0:27:72.14:0,72,757	1/1:5,21:27:59.69:883,60,0	1/1:1,25:27:36.78:947,37,0	1/1:0,20:23:44.12:618,44,0	1/1:1,0:15:35.71:125,36,0	0/0:22,0:22:51.11:0,51,543	0/0:18,0:19:44.80:0,45,459	0/0:43,0:46:99:0,114,1219	0/0:20,0:20:57.14:0,57,606	0/0:14,0:14:33.04:0,33,351	0/0:23,0:25:62.84:0,63,632	1/1:3,23:29:62.55:898,63,0	0/0:36,0:35:87.19:0,87,920	0/0:35,0:34:93.19:0,93,981	0/0:15,0:15:39.07:0,39,415
chr10	77880183	.	G	GA	4733.69	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.309;DP=699;FS=10.330;HRun=1;HaplotypeScore=118.4647;InbreedingCoeff=0.9892;MQ=78.54;MQ0=1;MQRankSum=-4.994;QD=39.45;ReadPosRankSum=1.410;VQSLOD=3.6569;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.26:0,87,1113	0/0:4,0:4:12.04:0,12,156	0/0:21,0:21:57.13:0,57,731	0/0:12,0:12:36.09:0,36,444	0/0:43,0:43:99:0,123,1596	0/0:27,0:27:81.26:0,81,1051	0/0:19,0:19:54.18:0,54,701	0/0:27,0:27:75.24:0,75,962	0/0:30,0:30:87.28:0,87,1129	0/0:32,0:32:81.50:0,81,1146	0/0:16,0:16:45.15:0,45,584	0/0:25,0:25:75.24:0,75,974	0/0:29,0:29:81.26:0,81,1051	0/0:29,0:29:78.25:0,78,1012	0/0:31,0:31:93.30:0,93,1208	0/0:19,0:19:57.19:0,57,740	0/0:19,0:19:57.19:0,57,739	0/0:24,0:24:72.18:0,72,901	1/1:0,21:21:60.20:879,60,0	1/1:0,34:34:96.24:1387,96,0	1/1:1,14:15:36.12:540,36,0	0/0:24,0:24:69.22:0,69,896	0/0:23,0:23:69.19:0,69,865	0/0:18,0:18:54.18:0,54,701	0/0:26,0:26:75.24:0,75,972	0/0:44,0:44:99:0,126,1636	1/1:4,45:49:99:1928,129,0	0/0:6,0:6:18.06:0,18,233
chr10	77880358	.	C	CT	8123.19	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=-9.118;DP=642;FS=3.317;HRun=9;HaplotypeScore=87.0884;InbreedingCoeff=0.5743;MQ=71.62;MQ0=5;MQRankSum=-1.173;QD=14.99;ReadPosRankSum=1.482;VQSLOD=5.2507;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:68.97:0,69,598	1/1:0,0:9:25.57:128,26,0	0/0:43,0:28:18.19:0,18,249	0/1:43,0:25:14.24:14,0,206	1/1:6,1:36:70.70:361,71,0	1/1:1,19:20:30.08:332,30,0	1/1:3,14:17:33.09:365,33,0	1/1:7,21:28:57.10:608,57,0	1/1:3,10:13:24.06:265,24,0	1/1:16,0:25:43.34:223,43,0	1/1:4,2:24:48.58:265,49,0	0/1:17,0:17:30.78:31,0,37	0/1:18,0:18:28.48:28,0,48	1/1:2,0:18:28.41:142,28,0	1/1:3,21:24:51.14:564,51,0	1/1:1,23:24:57.15:630,57,0	1/1:4,20:24:53.98:578,54,0	1/1:1,18:19:45.12:498,45,0	1/1:5,15:20:25.04:471,25,0	1/1:7,22:29:55.11:613,55,0	1/1:0,13:14:30.08:332,30,0	0/0:12,0:11:16.88:0,17,87	0/1:18,0:18:27.20:27,0,80	0/0:18,0:18:22.82:0,23,102	1/1:5,23:28:48.13:531,48,0	1/1:6,0:27:57.29:307,57,0	1/1:4,28:32:63.17:695,63,0	1/1:3,0:11:22.73:113,23,0
chr10	77880542	.	ATTTTGTTTTG	A	14730.85	PASS	AC=40;AF=0.870;AN=46;BaseQRankSum=9.564;DP=580;FS=4.076;HRun=0;HaplotypeScore=240.9478;InbreedingCoeff=0.9273;MQ=68.73;MQ0=2;MQRankSum=-8.421;QD=34.74;ReadPosRankSum=4.022;VQSLOD=4.1156;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:36:78.26:0,78,3399	1/1:2,0:8:18.06:419,18,0	0/0:27,0:19:12.04:0,12,471	0/0:39,0:33:36.12:0,36,1318	1/1:16,0:29:33.11:700,33,0	1/1:9,15:24:42.14:1256,42,0	1/1:13,3:16:9.03:270,9,0	./.	1/1:8,10:18:30.10:899,30,0	1/1:13,0:26:39.13:908,39,0	1/1:2,0:11:18.06:394,18,0	1/1:8,13:21:30.10:899,30,0	1/1:4,14:18:33.58:990,34,0	1/1:11,0:23:24.08:559,24,0	1/1:15,13:28:30.10:899,30,0	1/1:14,19:33:39.13:1169,39,0	1/1:21,10:30:24.13:805,24,0	1/1:13,9:23:21:609,21,0	./.	./.	./.	1/1:5,15:20:42.14:1254,42,0	1/1:10,6:16:15.05:446,15,0	1/1:16,7:23:15.05:450,15,0	1/1:8,13:21:30.10:896,30,0	1/1:15,0:27:30.99:700,31,0	./.	1/1:5,0:8:9.03:209,9,0
chr10	77881285	.	C	CA	8485.05	PASS	AB=1.000;AC=27;AF=0.563;AN=48;BaseQRankSum=-13.015;DP=551;FS=5.284;HRun=8;HaplotypeScore=63.1091;InbreedingCoeff=0.8926;MQ=81.97;MQ0=0;MQRankSum=-1.167;QD=27.11;ReadPosRankSum=-0.123;VQSLOD=5.4080;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,123,1119	0/0:9,0:9:20.95:0,21,183	0/1:11,0:11:18.85:19,0,42	0/0:22,0:23:15.14:0,15,248	0/0:25,0:25:38.45:0,38,521	1/1:2,12:14:5.63:319,6,0	1/1:2,14:16:36.11:416,36,0	1/1:4,27:31:81.23:924,81,0	1/1:3,20:25:66.02:731,66,0	0/0:31,0:31:87.04:0,87,796	0/0:19,0:19:54.03:0,54,494	1/1:5,14:19:45.13:517,45,0	1/1:5,26:31:69.21:796,69,0	0/0:20,0:20:48.02:0,48,439	1/1:2,23:26:63.02:707,63,0	1/1:3,23:26:63.19:727,63,0	1/1:0,18:17:51.15:589,51,0	0/0:20,0:20:54.03:0,54,494	./.	./.	./.	1/1:3,21:24:66.11:743,66,0	1/1:3,19:22:51.14:580,51,0	1/1:2,20:22:54.16:622,54,0	1/1:3,25:28:69.21:796,69,0	0/0:38,0:38:96.03:0,96,875	./.	0/0:7,0:7:15.01:0,15,137
chr10	77881942	.	G	GGA	15124.15	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-17.050;DP=595;FS=2.283;HRun=0;HaplotypeScore=66.9297;InbreedingCoeff=0.9915;MQ=86.39;MQ0=0;MQRankSum=-2.934;QD=44.75;ReadPosRankSum=4.283;VQSLOD=6.6520;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.22:0,66,907	0/0:9,0:9:24.07:0,24,312	0/0:21,0:21:51.16:0,51,677	0/0:20,0:20:45.15:0,45,607	0/0:15,0:15:45.12:0,45,582	1/1:0,19:19:57.20:1012,57,0	1/1:3,23:26:66.23:1171,66,0	1/1:3,32:35:96.29:1620,96,0	1/1:4,19:23:48.16:851,48,0	0/0:24,0:24:72.24:0,72,989	0/0:14,0:14:39.13:0,39,536	1/1:3,14:17:42.14:729,42,0	1/1:1,20:21:57.14:1011,57,0	0/0:22,0:22:60.20:0,60,821	1/1:2,35:37:99:1757,99,0	1/1:2,21:24:57.20:1012,57,0	1/1:3,34:37:90.31:1597,90,0	1/1:1,16:18:48.16:852,48,0	0/0:11,0:11:30.10:0,30,412	0/0:25,0:25:66.22:0,66,901	0/0:31,0:31:81.25:0,81,1094	1/1:2,22:25:57.20:1012,57,0	1/1:2,20:21:54.19:957,54,0	1/1:0,21:21:60.21:1065,60,0	1/1:1,12:13:27.09:479,27,0	0/0:17,0:17:42.14:0,42,577	0/0:20,0:20:57.18:0,57,768	0/0:3,0:3:9.03:0,9,124
chr10	77883769	.	ACTCTCT	A	816.70	PASS	AB=0.955;AC=17;AF=0.370;AN=46;BaseQRankSum=1.803;DP=568;FS=0.000;HRun=0;HaplotypeScore=115.1646;InbreedingCoeff=0.3102;MQ=67.12;MQ0=13;MQRankSum=-2.082;QD=3.65;ReadPosRankSum=-0.872;VQSLOD=1.8588;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:20.94:0,21,259	./.	./.	0/1:44,0:20:0.17:0,0,0	./.	1/1:10,7:17:9.03:180,9,0	0/1:25,1:26:19.47:172,0,19	0/0:35,0:35:2.04:0,2,6	0/1:12,0:14:20.90:90,0,21	1/1:25,0:25:7.08:76,7,0	./.	0/0:22,0:27:5.27:0,5,92	0/0:12,0:12:2.77:0,3,49	1/1:11,0:11:2.99:23,3,0	1/1:16,0:16:3.01:60,3,0	0/0:14,0:14:2.89:0,3,22	1/1:18,1:19:5.02:232,5,0	0/0:6,0:5:3.01:0,3,43	0/0:26,0:24:8.99:0,9,146	0/0:17,0:17:2.96:0,3,19	0/0:30,0:30:16.49:0,16,303	0/1:14,0:15:0:0,0,0	0/0:15,0:17:2.99:0,3,23	0/0:31,0:32:26.95:0,27,412	1/1:12,1:13:6.02:102,6,0	0/1:22,0:21:19.08:19,0,34	0/0:27,0:25:6.02:0,6,114	./.
chr10	77884472	.	ACT	A	18805.08	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=6.287;DP=736;FS=5.116;HRun=0;HaplotypeScore=108.5418;InbreedingCoeff=0.9553;MQ=75.32;MQ0=3;MQRankSum=-4.436;QD=29.43;ReadPosRankSum=5.890;VQSLOD=6.5655;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:89.89:0,90,1449	1/1:0,14:14:42.09:512,42,0	0/0:32,0:31:70.26:0,70,1064	0/0:29,0:29:49.02:0,49,680	1/1:5,28:33:75.20:928,75,0	1/1:3,24:27:57.18:719,57,0	1/1:0,28:28:72.23:908,72,0	1/1:6,29:36:84.09:1022,84,0	1/1:0,23:23:57.09:719,57,0	1/1:4,20:24:60.19:757,60,0	1/1:4,12:15:30.05:361,30,0	1/1:1,23:24:63.20:795,63,0	1/1:4,29:33:78.25:984,78,0	1/1:3,23:27:63.03:771,63,0	1/1:3,38:40:99:1249,99,0	1/1:2,27:29:66.21:833,66,0	1/1:7,13:20:13.12:393,13,0	1/1:1,14:15:36.12:454,36,0	1/1:5,17:22:51.15:626,51,0	1/1:3,31:34:87.28:1098,87,0	1/1:5,27:31:69.22:870,69,0	1/1:8,24:32:63.20:795,63,0	1/1:3,25:28:63.20:795,63,0	1/1:1,15:16:36.12:454,36,0	1/1:1,20:21:57.18:719,57,0	1/1:5,26:31:78.25:984,78,0	1/1:3,28:31:78.25:983,78,0	1/1:0,2:2:6.02:76,6,0
chr10	77885807	.	C	CT	1599.63	PASS	AB=0.558;AC=7;AF=0.125;AN=56;BaseQRankSum=-6.935;DP=585;FS=6.827;HRun=9;HaplotypeScore=57.2251;InbreedingCoeff=0.8335;MQ=72.43;MQ0=0;MQRankSum=-1.114;QD=19.75;ReadPosRankSum=2.787;VQSLOD=4.0966;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,125,1069	0/0:9,0:9:23.99:0,24,208	0/0:8,0:8:17.97:0,18,153	0/0:19,0:19:38.69:0,39,311	0/0:29,0:29:71.93:0,72,621	0/0:18,0:19:53.02:0,53,448	0/0:22,0:22:65.99:0,66,573	0/0:26,0:27:62:0,62,524	0/0:10,0:10:23.98:0,24,208	0/0:20,1:21:29.80:0,30,486	0/0:16,0:16:32.97:0,33,283	0/0:30,0:30:86.95:0,87,750	0/0:18,0:18:44.98:0,45,391	0/0:26,0:26:71.93:0,72,613	0/0:26,0:26:59.97:0,60,519	0/0:16,0:16:41.99:0,42,365	0/0:41,0:41:99:0,108,927	0/0:13,0:13:35.99:0,36,312	1/1:8,9:17:27.06:289,27,0	1/1:0,20:20:51.06:538,51,0	1/1:5,15:20:39.11:431,39,0	0/0:16,0:16:41.98:0,42,364	0/0:17,0:17:40.53:0,41,342	0/0:24,0:24:68.94:0,69,592	0/0:20,0:20:53.99:0,54,468	0/0:25,0:25:59.95:0,60,521	0/1:5,19:24:17.65:490,0,18	0/0:6,0:6:18:0,18,156
chr10	77886159	.	TG	T	6008.79	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=4.507;DP=616;FS=5.369;HRun=9;HaplotypeScore=70.4203;InbreedingCoeff=0.8990;MQ=72.05;MQ0=4;MQRankSum=-0.990;QD=19.26;ReadPosRankSum=4.000;VQSLOD=5.2839;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:64.59:0,65,732	0/0:14,0:14:39.06:0,39,408	0/0:31,1:24:7.72:0,8,308	0/1:10,0:7:13.44:13,0,64	0/0:31,0:31:81.21:0,81,905	1/1:7,23:30:60.03:548,60,0	1/1:3,19:22:53.93:482,54,0	1/1:8,21:29:38.84:520,39,0	1/1:1,18:19:48.03:439,48,0	0/0:24,0:23:51.05:0,51,613	0/0:21,0:21:47.58:0,48,481	1/1:2,27:29:66.02:599,66,0	1/1:4,20:24:45.02:411,45,0	0/0:22,0:22:34.12:0,34,567	1/1:2,26:28:47.70:438,48,0	1/1:4,28:32:71.97:658,72,0	1/1:0,18:18:48.03:438,48,0	0/0:15,1:16:17.75:0,18,453	0/0:0,0:18:34.03:0,34,175	0/0:0,0:23:25.53:0,26,126	0/0:1,0:21:11.17:0,11,53	1/1:1,20:21:53.98:485,54,0	1/1:2,19:21:48.02:438,48,0	1/1:0,16:16:36.02:329,36,0	1/1:2,11:13:18.19:211,18,0	0/0:28,0:28:60.06:0,60,615	0/0:0,0:23:22.43:0,22,106	0/0:2,0:2:6.02:0,6,68
chr10	77886928	.	GGTGT	G	1352.69	PASS	AB=0.866;AC=11;AF=0.212;AN=52;BaseQRankSum=2.870;DP=666;FS=5.405;HRun=0;HaplotypeScore=136.5308;InbreedingCoeff=0.5461;MQ=69.25;MQ0=16;MQRankSum=-0.469;QD=8.51;ReadPosRankSum=3.820;VQSLOD=2.4827;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,1:32:8.41:8,0,611	0/0:8,0:13:6.01:0,6,78	./.	./.	0/0:25,0:26:15.05:0,15,235	0/0:27,0:27:11.66:0,12,174	0/0:26,0:25:8.87:0,9,132	0/0:19,0:18:15.01:0,15,168	0/0:23,0:23:11.98:0,12,149	0/0:18,0:18:24.07:0,24,325	0/0:15,0:19:5.72:0,6,126	0/1:22,0:23:2.40:2,0,805	0/0:18,0:18:33.53:0,34,634	0/0:18,0:20:18.43:0,18,228	0/0:30,0:28:6.02:0,6,100	0/0:30,0:30:9.50:0,10,136	0/0:27,0:25:18.06:0,18,282	0/1:6,10:17:22.28:394,0,22	1/1:17,1:18:5.01:60,5,0	1/1:16,9:26:21.02:281,21,0	1/1:12,8:18:15.05:233,15,0	0/0:19,0:19:20.81:0,21,404	0/0:13,0:17:23.82:0,24,510	0/0:37,1:42:24.28:0,24,1326	0/0:18,0:24:8.74:0,9,148	0/0:12,0:18:33.09:0,33,472	1/1:10,10:23:39.07:528,39,0	0/0:2,0:6:9.03:0,9,157
chr10	77886944	.	T	TGT	904.38	PASS	AB=1.000;AC=31;AF=0.596;AN=52;BaseQRankSum=-1.091;DP=665;FS=0.000;HRun=0;HaplotypeScore=118.8505;InbreedingCoeff=0.5885;MQ=52.73;MQ0=26;MQRankSum=-0.081;QD=2.44;ReadPosRankSum=-5.487;VQSLOD=-0.5762;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:26.71:0,27,235	1/1:12,0:12:5.99:66,6,0	./.	./.	1/1:17,5:23:9.01:95,9,0	1/1:27,0:27:2.78:24,3,0	1/1:25,0:24:0.16:0,0,0	1/1:18,0:16:7.03:31,7,0	1/1:23,0:21:9.01:92,9,0	1/1:21,0:20:9.97:110,10,0	0/1:15,0:15:20.20:20,0,27	0/1:35,0:35:0.93:1,0,343	0/0:22,0:22:21.17:0,21,213	1/1:18,0:17:12.02:138,12,0	1/1:26,0:24:5.67:34,6,0	1/1:27,0:27:3:25,3,0	1/1:29,0:27:11.79:68,12,0	0/1:20,0:20:18.54:19,0,86	0/0:18,0:17:2.76:0,3,14	0/0:27,0:27:15.25:0,15,73	0/0:24,0:22:12.61:0,13,59	0/0:19,0:19:17.72:0,18,175	0/0:22,0:22:23.90:0,24,241	0/0:42,0:42:65.51:0,66,644	1/1:26,0:24:6:52,6,0	1/1:20,0:20:24.39:215,24,0	0/0:23,0:23:34.05:0,34,167	1/1:5,0:5:9.01:97,9,0
chr10	77887275	.	T	TC	4213.03	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=2.268;DP=619;FS=0.846;HRun=1;HaplotypeScore=89.7647;InbreedingCoeff=0.9838;MQ=92.18;MQ0=0;MQRankSum=-1.121;QD=40.51;ReadPosRankSum=0.268;VQSLOD=5.0146;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.19:0,72,915	0/0:15,0:15:45.15:0,45,584	0/0:23,0:23:66.21:0,66,845	0/0:29,0:29:75.21:0,75,952	0/0:27,0:27:75.18:0,75,952	0/0:11,0:11:30.05:0,30,370	0/0:23,0:23:69.22:0,69,896	0/0:28,0:28:84.26:0,84,1079	0/0:15,0:15:45.14:0,45,571	0/0:18,0:18:54.17:0,54,691	0/0:13,0:13:36.02:0,36,428	0/0:19,0:19:57.19:0,57,740	0/0:22,0:22:63.20:0,63,818	0/0:37,0:37:99:0,105,1362	0/0:30,0:30:84.26:0,84,1076	0/0:28,0:28:81.25:0,81,1037	0/0:23,0:23:66.21:0,66,856	0/0:25,0:25:75.22:0,75,956	1/1:1,25:26:75.23:1057,75,0	1/1:1,22:23:63.21:915,63,0	1/1:1,18:19:48.16:704,48,0	0/0:26,0:26:75.20:0,75,954	0/0:16,0:16:48.07:0,48,599	0/0:22,0:22:63.14:0,63,773	0/0:20,0:20:57.14:0,57,721	0/0:18,0:18:48.16:0,48,623	1/1:0,36:36:99:1536,105,0	0/0:3,0:3:9.03:0,9,117
chr10	77887329	.	CA	C	5893.21	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=7.342;DP=647;FS=8.950;HRun=10;HaplotypeScore=80.1154;InbreedingCoeff=0.9979;MQ=64.43;MQ0=2;MQRankSum=1.297;QD=19.51;ReadPosRankSum=3.100;VQSLOD=5.5827;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:30:46.82:0,47,704	0/0:11,0:12:35.93:0,36,379	0/0:19,0:12:23.73:0,24,218	0/0:14,0:10:21.63:0,22,149	0/0:32,1:36:78.73:0,79,1045	1/1:2,7:9:17.99:156,18,0	1/1:5,21:26:47.98:417,48,0	1/1:12,28:40:58.28:628,58,0	1/1:1,15:16:38.99:338,39,0	0/0:27,0:27:66.18:0,66,729	0/0:17,0:18:35.93:0,36,379	1/1:4,17:21:41.98:365,42,0	1/1:2,14:16:38.99:339,39,0	0/0:29,0:29:60.13:0,60,639	1/1:2,25:27:65.98:573,66,0	1/1:3,31:34:80.89:703,81,0	1/1:2,29:32:80.02:683,80,0	0/0:27,0:26:72.16:0,72,777	0/0:29,0:30:66:0,66,703	0/0:17,0:17:42.10:0,42,456	0/0:20,0:22:51.25:0,51,510	1/1:2,16:18:44.99:391,45,0	1/1:5,18:23:44.98:391,45,0	1/1:2,18:20:56.98:495,57,0	1/1:3,17:20:47.98:417,48,0	0/0:15,0:17:41.93:0,42,435	0/0:37,0:37:94.79:0,95,1017	0/0:10,0:10:30.08:0,30,332
chr10	77888607	.	GA	G	6502.06	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.123;DP=678;FS=0.996;HRun=6;HaplotypeScore=68.7500;InbreedingCoeff=0.9975;MQ=85.57;MQ0=0;MQRankSum=-2.344;QD=28.39;ReadPosRankSum=1.040;VQSLOD=5.5019;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.29:0,96,1234	1/1:0,10:10:26.68:290,27,0	0/0:29,0:29:77.15:0,77,914	0/0:17,0:17:46.43:0,46,553	1/1:0,24:24:69.17:741,69,0	0/0:22,0:22:54.18:0,54,711	0/0:22,0:22:66.21:0,66,869	0/0:29,0:29:84.27:0,84,1105	0/0:24,0:24:66.20:0,66,853	1/1:1,24:25:72.17:766,72,0	1/1:2,19:21:48.12:516,48,0	0/0:22,0:22:60.20:0,60,790	0/0:36,0:36:96.31:0,96,1263	1/1:3,15:18:39.10:419,39,0	0/0:41,0:41:99:0,117,1525	0/0:27,0:27:75.24:0,75,987	0/0:33,0:33:81.26:0,81,1053	0/0:19,0:19:51.17:0,51,669	1/1:1,21:22:66.17:709,66,0	1/1:2,25:27:75.19:805,75,0	1/1:4,31:35:87.22:934,87,0	0/0:23,0:23:69.22:0,69,907	0/0:15,0:15:39.13:0,39,513	0/0:31,0:31:93.30:0,93,1218	0/0:26,0:26:72.23:0,72,934	1/1:1,21:22:63.16:677,63,0	1/1:2,18:20:45.11:484,45,0	1/1:0,5:5:15.04:161,15,0
chr10	77889353	.	CTTT	C	3951.76	PASS	AB=0.689;AC=24;AF=0.429;AN=56;BaseQRankSum=10.930;DP=602;FS=1.348;HRun=15;HaplotypeScore=122.3274;InbreedingCoeff=0.8273;MQ=68.50;MQ0=0;MQRankSum=-0.112;QD=14.01;ReadPosRankSum=9.659;VQSLOD=1.2686;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:44:99:0,108,1570	0/0:7,0:8:24.05:0,24,379	0/1:12,1:14:12.19:12,0,162	0/0:8,0:8:9.03:0,9,123	0/0:28,0:30:67:0,67,933	1/1:4,18:24:46.41:519,46,0	1/1:8,10:21:32.20:342,32,0	0/0:20,0:38:30.22:0,30,123	1/1:10,7:19:18.52:200,19,0	0/0:23,0:22:53.11:0,53,747	0/0:24,0:24:48.13:0,48,788	1/1:8,16:24:21.41:415,21,0	1/1:7,16:23:26.80:296,27,0	0/0:19,0:19:39.12:0,39,599	0/1:6,15:22:36.98:269,0,37	1/1:8,23:31:60.44:673,60,0	1/1:5,14:19:24:269,24,0	0/0:14,0:14:31.34:0,31,472	0/0:11,0:25:66.13:0,66,837	0/0:16,0:26:39.06:0,39,500	0/0:7,0:16:21.04:0,21,259	1/1:10,10:21:6.25:170,6,0	1/1:6,9:18:25.30:268,25,0	1/1:5,14:19:26.34:302,26,0	1/1:10,13:25:19.18:216,19,0	0/0:15,0:18:28.30:0,28,374	0/0:10,0:21:29.99:0,30,365	0/0:4,0:4:12.04:0,12,201
chr10	77889969	.	A	AT	433.36	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.845;DP=613;FS=23.342;HRun=6;HaplotypeScore=78.2228;InbreedingCoeff=0.9843;MQ=75.53;MQ0=0;MQRankSum=-1.825;QD=27.08;ReadPosRankSum=1.881;VQSLOD=2.0114;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.13:0,75,750	0/0:10,0:10:27.06:0,27,275	0/0:14,0:13:24.03:0,24,236	0/0:14,0:14:21.02:0,21,205	0/0:31,0:31:90.20:0,90,916	0/0:19,0:19:57.11:0,57,574	0/0:13,0:13:36.07:0,36,361	0/0:38,0:38:90.12:0,90,902	0/0:24,0:24:72.14:0,72,721	0/0:31,0:31:87.17:0,87,872	0/0:31,0:31:90.20:0,90,918	0/0:14,0:14:39.09:0,39,398	0/0:23,0:23:60.10:0,60,599	0/0:24,0:24:66.15:0,66,673	0/0:29,0:29:84.16:0,84,843	0/0:24,0:24:72.14:0,72,723	0/0:30,0:30:87.15:0,87,876	1/1:0,16:16:42.13:528,42,0	0/0:16,0:16:42.09:0,42,429	0/0:23,0:23:69.14:0,69,696	0/0:10,0:10:30.07:0,30,306	0/0:24,0:24:72.12:0,72,718	0/0:16,0:16:48.11:0,48,490	0/0:7,0:7:18.04:0,18,184	0/0:36,0:36:99:0,108,1095	0/0:29,0:29:87.20:0,87,888	0/0:23,0:23:60.12:0,60,604	0/0:15,0:15:45.10:0,45,459
chr10	77890721	.	A	AAG	15420.81	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-18.921;DP=683;FS=4.800;HRun=0;HaplotypeScore=72.5117;InbreedingCoeff=0.9722;MQ=77.49;MQ0=0;MQRankSum=-2.496;QD=46.03;ReadPosRankSum=3.429;VQSLOD=6.3834;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1786	0/0:12,0:12:36.12:0,36,530	0/0:18,0:18:14.42:0,14,530	0/0:12,0:12:2.81:0,3,287	0/0:31,0:31:93.29:0,93,1332	1/1:1,28:30:72.24:1320,72,0	1/1:3,23:26:63.22:1180,63,0	1/1:0,40:40:99:2135,120,0	1/1:0,26:26:69.24:1292,69,0	0/0:20,0:20:54.18:0,54,794	0/0:25,0:25:75.25:0,75,1100	1/1:0,17:17:42.14:787,42,0	1/1:1,26:27:60.21:1123,60,0	0/0:29,0:29:87.28:0,87,1256	1/1:2,31:34:75.26:1405,75,0	1/1:2,27:30:63.22:1180,63,0	1/1:0,21:21:54.19:1011,54,0	0/0:10,0:10:30.10:0,30,437	0/0:21,0:21:60.17:0,60,825	0/0:24,0:24:69.23:0,69,1012	0/0:33,0:33:98.99:0,99,1403	1/1:2,20:22:48.16:899,48,0	1/1:0,26:27:69.13:1291,69,0	1/1:0,14:15:42.14:786,42,0	1/1:0,20:20:54.19:1011,54,0	0/0:26,0:26:75.24:0,75,1068	0/0:38,0:38:99:0,114,1637	0/0:7,0:7:21.06:0,21,288
chr10	77891343	.	AG	A	10091.25	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=12.229;DP=601;FS=0.000;HRun=1;HaplotypeScore=60.8602;InbreedingCoeff=0.9998;MQ=78.23;MQ0=0;MQRankSum=-1.739;QD=37.51;ReadPosRankSum=3.914;VQSLOD=5.1533;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,2126	0/0:10,0:10:30.10:0,30,480	0/0:25,0:25:63.77:0,64,1075	0/0:14,0:14:36.12:0,36,564	0/0:20,0:20:60.20:0,60,959	1/1:0,29:29:72.24:1007,72,0	1/1:0,17:17:45.15:628,45,0	1/1:0,24:24:72.23:987,72,0	1/1:0,11:11:33.11:462,33,0	0/0:29,0:29:87.29:0,87,1369	0/0:20,0:20:57.19:0,57,904	1/1:0,17:17:48.16:671,48,0	1/1:0,15:15:36.12:503,36,0	0/0:11,0:11:33.11:0,33,525	1/1:0,27:27:63.21:881,63,0	1/1:0,24:24:69.23:965,69,0	1/1:0,17:17:48.16:671,48,0	0/0:22,0:22:66.16:0,66,1002	0/0:20,0:20:57.18:0,57,854	0/0:32,0:32:96.31:0,96,1505	0/0:20,0:20:60.20:0,60,956	1/1:0,24:24:66.22:923,66,0	1/1:0,24:24:63.21:881,63,0	1/1:0,18:18:45.15:629,45,0	1/1:0,22:22:63.21:881,63,0	0/0:29,0:29:87.29:0,87,1371	0/0:23,0:23:69.22:0,69,1068	0/0:11,0:11:33.11:0,33,521
chr10	77892695	.	ATTG	A	8280.10	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=10.571;DP=546;FS=5.428;HRun=0;HaplotypeScore=81.7626;InbreedingCoeff=0.9993;MQ=84.07;MQ0=0;MQRankSum=-6.177;QD=39.43;ReadPosRankSum=0.594;VQSLOD=5.6711;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.11:0,87,1799	0/0:10,0:10:27.09:0,27,585	0/0:16,0:16:42.14:0,42,802	0/0:23,0:23:46.54:0,47,1230	0/0:36,0:36:99:0,102,2278	1/1:1,14:15:39.13:625,39,0	1/1:0,21:20:45.15:732,45,0	1/1:0,25:25:75.24:1195,75,0	1/1:1,9:10:24.08:391,24,0	0/0:21,0:21:60.20:0,60,1303	0/0:17,0:17:48.15:0,48,1030	0/0:18,0:18:54.18:0,54,1146	0/0:17,0:17:33.11:0,33,714	0/0:13,0:13:39.02:0,39,767	1/1:0,17:17:45.15:734,45,0	1/1:2,19:21:48.16:772,48,0	1/1:2,17:19:33.09:538,33,0	0/0:26,0:26:75.26:0,75,1675	1/1:3,14:17:45.14:709,45,0	1/1:0,13:13:39.13:625,39,0	1/1:1,13:14:36.12:587,36,0	0/0:24,0:24:69.24:0,69,1539	0/0:21,0:21:63.22:0,63,1405	0/0:21,0:21:54.19:0,54,1188	1/1:1,13:14:33.11:539,33,0	0/0:32,0:32:90.31:0,90,1980	1/1:3,21:24:51.17:832,51,0	0/0:10,0:10:30.10:0,30,670
chr10	77892776	.	TTCTTTCTC	T	4117.01	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=0.373;DP=354;FS=8.553;HRun=0;HaplotypeScore=92.0161;InbreedingCoeff=0.7757;MQ=70.05;MQ0=11;MQRankSum=-4.397;QD=16.67;ReadPosRankSum=3.087;VQSLOD=1.1549;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:52.33:0,52,738	1/1:5,0:5:14.86:111,15,0	0/0:30,0:12:20.24:0,20,302	0/0:40,0:20:16.28:0,16,279	1/1:12,0:12:23.97:198,24,0	1/1:9,0:9:14.87:125,15,0	./.	1/1:11,0:11:30.45:266,30,0	1/1:6,1:8:5.94:43,6,0	1/1:11,0:11:28.26:261,28,0	1/1:7,0:7:14.99:148,15,0	1/1:14,0:14:32.73:241,33,0	1/1:12,0:12:3.01:56,3,0	1/1:9,0:9:17.93:148,18,0	1/1:7,0:6:14.97:122,15,0	1/1:12,0:13:14.94:123,15,0	1/1:10,2:13:23.88:280,24,0	1/1:2,0:2:5.95:44,6,0	1/1:5,1:5:6.01:112,6,0	1/1:7,0:8:17.82:142,18,0	1/1:20,0:20:38.82:298,39,0	1/1:11,0:11:23.95:195,24,0	1/1:16,0:16:38.81:302,39,0	1/1:11,0:11:14.70:121,15,0	1/1:6,2:8:5.99:49,6,0	1/1:12,0:12:30.50:279,30,0	1/1:10,0:13:29.86:263,30,0	1/1:8,0:7:17.98:191,18,0
chr10	77892778	.	CTT	C	3795.94	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=1.177;DP=343;FS=7.199;HRun=3;HaplotypeScore=61.8900;InbreedingCoeff=0.7763;MQ=66.59;MQ0=12;MQRankSum=-5.448;QD=15.82;ReadPosRankSum=2.439;VQSLOD=0.6233;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:45.35:0,45,435	1/1:5,0:5:14.86:111,15,0	0/0:29,0:11:20.24:0,20,302	0/0:38,0:18:16.71:0,17,280	1/1:9,2:11:23.97:198,24,0	1/1:7,0:7:14.87:125,15,0	./.	1/1:11,0:11:31.54:268,32,0	1/1:8,0:8:5.94:43,6,0	1/1:0,11:11:29.17:242,29,0	1/1:7,0:7:14.98:123,15,0	1/1:14,0:14:32.73:241,33,0	1/1:0,12:12:2.94:18,3,0	1/1:8,1:9:17.92:143,18,0	1/1:8,0:7:14.97:122,15,0	1/1:13,0:13:14.93:118,15,0	1/1:13,0:13:23.85:181,24,0	1/1:2,0:2:5.95:44,6,0	1/1:5,0:3:6:52,6,0	1/1:7,0:7:17.72:142,18,0	1/1:22,0:20:38.82:298,39,0	1/1:10,0:10:23.95:195,24,0	1/1:15,1:16:38.81:302,39,0	1/1:10,0:10:14.52:121,15,0	1/1:7,0:7:5.99:49,6,0	1/1:11,1:12:30.90:273,31,0	1/1:12,0:12:29.85:236,30,0	1/1:8,0:7:17.98:151,18,0
chr10	77892835	.	ACGCACGCACGCACGCACGCACGCACGCACG	A	2471.78	PASS	AB=0.913;AC=20;AF=0.455;AN=44;BaseQRankSum=0.355;DP=348;FS=5.216;HRun=0;HaplotypeScore=152.4836;InbreedingCoeff=0.3226;MQ=30.19;MQ0=29;MQRankSum=-1.670;QD=15.84;ReadPosRankSum=0.178;VQSLOD=2.5095;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:26.12:0,26,2076	0/1:2,0:3:0:0,0,0	./.	./.	./.	0/1:12,0:11:0:0,0,0	1/1:22,0:18:0.94:2,1,0	0/1:15,0:11:1.58:2,0,971	./.	0/1:5,0:8:99:804,0,260	./.	0/0:7,0:7:3.01:0,3,213	0/0:10,0:10:11.29:0,11,744	1/1:2,7:12:6.02:445,6,0	0/0:14,0:14:2.32:0,2,369	0/1:19,0:16:6.47:6,0,440	0/0:22,0:18:19.80:0,20,1023	0/1:11,0:7:22.29:22,0,560	0/0:12,0:10:13.34:0,13,808	0/0:10,0:10:0.89:0,1,2	0/0:31,0:23:3.48:0,3,228	1/1:12,0:10:0.89:2,1,0	1/1:9,0:9:1.47:3,1,0	./.	1/1:11,0:11:0.89:2,1,0	1/1:5,8:10:22.05:362,22,0	0/0:13,0:10:10.06:0,10,414	1/1:3,3:7:12.04:946,12,0
chr10	77892839	.	ACGCACGCACGCACGCACGCACGCACG	A	2033.25	PASS	AB=0.913;AC=18;AF=0.391;AN=46;BaseQRankSum=2.630;DP=349;FS=5.564;HRun=0;HaplotypeScore=140.5344;InbreedingCoeff=0.3610;MQ=30.30;MQ0=29;MQRankSum=-2.368;QD=15.17;ReadPosRankSum=0.635;VQSLOD=2.3953;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:30.10:0,30,2366	0/1:2,1:3:0:0,0,0	0/0:10,0:1:3.01:0,3,39	./.	./.	0/1:12,0:11:0:0,0,0	0/1:21,0:17:0:0,0,0	0/1:14,0:10:15.99:16,0,866	./.	0/1:5,3:8:99:724,0,248	./.	0/0:8,0:8:3.01:0,3,211	0/0:8,0:8:12.04:0,12,689	1/1:10,3:12:6.02:401,6,0	0/0:15,0:15:2.29:0,2,339	0/0:19,0:16:8.94:0,9,400	0/0:23,0:19:19.82:0,20,957	0/1:11,0:7:2.42:2,0,466	0/0:13,0:12:26.86:0,27,1024	0/0:9,0:9:0.47:0,0,1	0/0:31,0:23:2.99:0,3,204	1/1:11,0:10:0.89:2,1,0	1/1:8,0:8:1.75:4,2,0	./.	1/1:11,0:11:0.47:1,0,0	1/1:13,0:10:11.90:245,12,0	0/0:13,0:10:11.14:0,11,413	1/1:7,0:7:12.04:762,12,0
chr10	77892846	.	C	CACACACATACAC	539.82	PASS	AB=1.000;AC=16;AF=0.364;AN=44;BaseQRankSum=0.900;DP=360;FS=2.255;HRun=0;HaplotypeScore=136.1241;InbreedingCoeff=0.2016;MQ=31.46;MQ0=28;MQRankSum=-0.703;QD=4.09;ReadPosRankSum=-1.086;VQSLOD=2.3742;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:29.95:0,30,847	1/1:3,0:3:0.47:1,0,0	0/0:13,0:1:0:0,0,0	./.	./.	./.	1/1:22,0:18:5.54:32,6,0	0/0:13,0:10:23.90:0,24,335	./.	0/1:7,0:7:42.31:42,0,316	./.	1/1:8,0:8:3.01:89,3,0	1/1:10,0:10:17.96:289,18,0	0/0:13,0:12:6.02:0,6,156	0/0:15,0:14:3.48:0,3,59	0/0:17,0:14:5.69:0,6,134	0/1:24,0:22:48.63:49,0,293	0/1:11,0:8:63.91:64,0,104	0/0:11,0:10:27.51:0,28,359	0/1:8,0:8:0:0,0,0	0/0:33,0:25:2.80:0,3,93	1/1:14,0:13:5.78:48,6,0	0/0:9,0:9:2.13:0,2,6	./.	0/0:11,0:11:0.47:0,0,1	0/1:11,0:9:9.60:10,0,77	0/1:14,0:11:48.14:48,0,88	0/0:9,0:7:12.04:0,12,286
chr10	77892863	.	ACG	A	563.99	PASS	AB=0.916;AC=19;AF=0.380;AN=50;BaseQRankSum=3.204;DP=382;FS=0.733;HRun=0;HaplotypeScore=113.5708;InbreedingCoeff=0.3565;MQ=40.27;MQ0=17;MQRankSum=-1.371;QD=4.51;ReadPosRankSum=0.917;VQSLOD=2.4784;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:45.15:0,45,718	1/1:2,0:2:2.04:6,2,0	0/0:13,0:5:0.67:0,1,29	0/0:18,0:3:0.90:0,1,38	./.	0/0:9,0:9:2.83:0,3,15	0/0:24,0:22:6.75:0,7,46	0/0:15,0:14:3.37:0,3,214	./.	1/1:12,0:11:10.60:111,11,0	0/1:11,0:9:0:0,0,0	0/0:14,1:15:17.75:0,18,153	0/0:11,0:11:18.74:0,19,187	1/1:12,0:12:8.94:65,9,0	0/0:13,0:12:3.01:0,3,55	0/1:14,0:13:12.01:12,0,111	0/0:27,0:27:15.83:0,16,162	0/1:6,7:11:14.59:219,0,15	0/1:13,0:12:6.15:6,0,250	./.	0/0:29,0:22:3.01:0,3,49	0/0:17,0:16:17.53:0,18,125	0/1:12,1:13:29.56:30,0,51	0/0:19,0:19:17.89:0,18,131	1/1:9,0:9:2.97:21,3,0	1/1:8,0:8:5.89:39,6,0	1/1:11,0:10:13.99:145,14,0	1/1:7,0:6:11.63:65,12,0
chr10	77893060	.	ATTT	A	13193.58	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=5.650;DP=527;FS=0.000;HRun=12;HaplotypeScore=85.4919;InbreedingCoeff=0.9504;MQ=68.90;MQ0=1;MQRankSum=0.018;QD=28.87;ReadPosRankSum=3.439;VQSLOD=4.2931;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:26:69.15:0,69,1168	1/1:0,9:9:21.06:265,21,0	0/0:8,0:6:9.03:0,9,146	0/0:18,0:14:7.98:0,8,191	1/1:3,23:26:66.18:833,66,0	1/1:1,23:24:51.16:644,51,0	1/1:4,13:17:39.09:493,39,0	1/1:6,16:22:48.08:589,48,0	1/1:2,20:22:54.17:682,54,0	1/1:1,20:21:60.15:731,60,0	1/1:2,9:11:27.07:336,27,0	1/1:1,21:22:60.17:754,60,0	1/1:2,21:23:45.14:568,45,0	1/1:3,18:21:51.15:635,51,0	1/1:0,14:14:39.12:493,39,0	1/1:3,25:28:63.19:796,63,0	1/1:4,23:27:57.14:720,57,0	0/0:18,0:18:45.15:0,45,864	1/1:3,13:17:38.30:469,38,0	1/1:3,15:18:39.05:488,39,0	1/1:1,8:9:18.06:227,18,0	1/1:7,15:21:39.02:482,39,0	1/1:5,18:23:51.10:644,51,0	1/1:3,27:30:65.68:833,66,0	1/1:0,14:15:34.69:448,35,0	1/1:1,11:12:33.10:417,33,0	1/1:1,19:20:39.01:493,39,0	1/1:0,4:4:12.04:152,12,0
chr10	77894256	.	AT	A	4457.82	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.422;DP=623;FS=3.539;HRun=7;HaplotypeScore=57.5656;InbreedingCoeff=0.9911;MQ=67.86;MQ0=0;MQRankSum=0.508;QD=27.35;ReadPosRankSum=0.973;VQSLOD=5.6205;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.29:0,96,1195	1/1:0,9:9:27.06:275,27,0	0/0:9,0:8:21.04:0,21,223	0/0:5,1:6:14.78:0,15,125	1/1:2,30:32:90.20:918,90,0	0/0:29,0:29:84.24:0,84,1038	0/0:11,0:11:30.10:0,30,377	0/0:41,0:41:99:0,108,1327	0/0:24,0:24:60.18:0,60,742	1/1:3,18:21:54.12:551,54,0	1/1:2,19:21:54.12:548,54,0	0/0:16,0:16:46.03:0,46,568	0/0:23,0:23:66.20:0,66,819	1/1:1,32:33:90.20:918,90,0	0/0:26,0:26:75.23:0,75,930	0/0:16,0:16:45.14:0,45,566	0/0:34,0:34:99:0,102,1253	1/1:2,14:16:42.09:428,42,0	0/0:21,0:21:54.17:0,54,669	0/0:14,0:14:39.11:0,39,478	0/0:23,0:23:66.19:0,66,806	0/0:21,0:21:57.18:0,57,717	0/0:19,0:19:51.16:0,51,642	0/0:27,0:27:81.26:0,81,1018	0/0:33,0:33:87.26:0,87,1079	1/1:1,23:24:69.14:696,69,0	0/0:34,0:34:99:0,99,1241	1/1:1,6:7:12.03:122,12,0
chr10	77895586	.	GT	G	3077.93	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.051;DP=699;FS=1.767;HRun=6;HaplotypeScore=100.7234;InbreedingCoeff=0.9999;MQ=76.19;MQ0=0;MQRankSum=-4.168;QD=26.08;ReadPosRankSum=3.971;VQSLOD=3.6353;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.24:0,75,986	0/0:11,0:11:33.11:0,33,434	0/0:22,0:22:60.17:0,60,752	0/0:27,0:26:50.19:0,50,686	0/0:28,0:28:72.23:0,72,947	0/0:26,0:26:72.23:0,72,943	0/0:29,0:29:78.24:0,78,1011	0/0:34,0:34:78.23:0,78,986	0/0:29,0:29:81.25:0,81,1050	0/0:27,0:28:78.25:0,78,1017	0/0:27,0:27:72.22:0,72,921	1/1:2,23:25:63.16:677,63,0	1/1:1,19:20:54.14:580,54,0	0/0:27,0:27:81.23:0,81,1022	0/0:31,0:31:93.27:0,93,1181	0/0:30,0:30:87.27:0,87,1118	0/0:22,0:22:63.20:0,63,829	0/0:18,0:18:51.16:0,51,665	0/0:24,0:24:66.21:0,66,868	0/0:32,0:32:90.28:0,90,1169	0/0:17,0:17:42.14:0,42,551	1/1:1,23:24:63.16:674,63,0	1/1:1,22:23:57.03:612,57,0	1/1:1,25:26:66.17:709,66,0	0/0:29,0:29:84.24:0,84,1075	0/0:33,0:33:96.31:0,96,1263	0/0:18,0:18:54.16:0,54,693	0/0:13,0:12:36.12:0,36,474
chr10	77895795	.	TA	T	5531.51	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=16.709;DP=752;FS=3.980;HRun=2;HaplotypeScore=88.9099;InbreedingCoeff=0.9958;MQ=87.26;MQ0=0;MQRankSum=-2.445;QD=36.88;ReadPosRankSum=4.415;VQSLOD=5.3490;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,154,2293	0/0:8,0:8:24.08:0,24,360	0/0:30,0:30:83.93:0,84,1180	0/0:20,0:20:57.19:0,57,852	0/0:34,0:34:99:0,102,1509	0/0:20,0:20:60.20:0,60,898	0/0:26,0:26:75.25:0,75,1124	0/0:30,0:30:84.28:0,84,1258	0/0:32,0:32:96.33:0,96,1438	0/0:29,0:29:87.29:0,87,1287	0/0:20,0:20:60.19:0,60,876	1/1:0,38:38:99:1325,102,0	1/1:0,32:32:90.29:1168,90,0	0/0:22,0:22:63.21:0,63,943	0/0:31,0:30:93.32:0,93,1394	0/0:32,0:32:90.30:0,90,1331	0/0:28,0:28:81.27:0,81,1214	0/0:24,0:24:69.21:0,69,1007	0/0:24,0:24:72.21:0,72,1037	0/0:23,0:23:63.21:0,63,944	0/0:32,0:32:96.33:0,96,1436	1/1:0,26:26:75.24:974,75,0	1/1:0,22:22:66.21:857,66,0	1/1:0,32:32:93.30:1208,93,0	0/0:27,0:27:81.27:0,81,1214	0/0:26,0:26:75.25:0,75,1124	0/0:28,0:27:84.28:0,84,1247	0/0:5,0:5:15.05:0,15,225
chr10	77897732	.	A	ATT	8791.44	PASS	AB=0.545;AC=37;AF=0.661;AN=56;BaseQRankSum=0.149;DP=709;FS=1.461;HRun=10;HaplotypeScore=96.7389;InbreedingCoeff=0.9184;MQ=80.23;MQ0=0;MQRankSum=-0.553;QD=18.24;ReadPosRankSum=-0.486;VQSLOD=3.8288;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:35:71.56:0,72,763	0/1:2,0:12:10.04:41,0,10	0/0:23,0:21:17.63:0,18,227	0/0:20,0:21:32.25:0,32,268	1/1:3,0:21:14.04:143,14,0	1/1:3,12:15:27.09:403,27,0	1/1:4,27:32:71.73:1040,72,0	1/1:10,29:39:82.61:1190,83,0	1/1:2,12:14:33.11:491,33,0	1/1:10,0:34:54.36:191,54,0	1/1:2,0:24:20.25:147,20,0	0/0:28,0:29:77.85:0,78,768	0/0:37,0:37:99:0,105,1047	1/1:1,0:20:39.47:138,39,0	1/1:1,28:29:69.23:1029,69,0	1/1:1,21:22:51.17:762,51,0	1/1:4,31:36:80.76:1173,81,0	0/0:31,0:31:75.12:0,75,763	1/1:7,0:25:17.90:143,18,0	1/1:2,1:26:26.64:202,27,0	1/1:0,0:8:17.47:61,17,0	0/0:12,0:12:33.06:0,33,336	0/0:18,0:20:50.77:0,51,552	0/0:19,0:19:57.09:0,57,569	1/1:5,27:33:72.61:1040,73,0	1/1:5,0:43:86.69:319,87,0	1/1:7,0:37:59.53:209,60,0	1/1:1,0:11:19.96:70,20,0
chr10	77898006	.	A	AT	12136.68	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-16.953;DP=723;FS=4.284;HRun=7;HaplotypeScore=65.4960;InbreedingCoeff=0.9996;MQ=78.49;MQ0=0;MQRankSum=-2.298;QD=29.25;ReadPosRankSum=3.523;VQSLOD=5.5203;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,171,1614	1/1:4,15:19:36.11:435,36,0	0/0:18,0:18:32.07:0,32,304	0/0:13,0:13:26.62:0,27,239	1/1:1,23:24:69.17:817,69,0	0/0:23,0:23:69.08:0,69,655	0/0:18,0:18:48.07:0,48,464	0/0:35,0:35:87.07:0,87,818	0/0:17,0:17:45.07:0,45,435	1/1:3,29:32:87.26:1041,87,0	1/1:5,23:29:75.08:866,75,0	1/1:4,21:25:57.17:689,57,0	1/1:2,27:30:69.08:833,69,0	1/1:3,23:26:69.21:834,69,0	0/0:24,0:25:68.13:0,68,638	0/0:35,0:35:99:0,102,980	0/0:31,0:30:81.11:0,81,777	1/1:2,23:25:63.19:761,63,0	1/1:3,13:16:39.12:471,39,0	1/1:6,25:31:63.49:850,63,0	1/1:2,24:26:63.19:761,63,0	1/1:2,15:17:42.13:506,42,0	1/1:6,17:23:38.88:471,39,0	1/1:1,35:36:99:1196,99,0	0/0:32,0:32:90.11:0,90,858	1/1:2,25:27:75.20:881,75,0	1/1:2,18:20:33.10:399,33,0	1/1:0,9:9:27.08:326,27,0
chr10	77899707	.	G	GA	10083.74	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=1.833;DP=588;FS=6.175;HRun=8;HaplotypeScore=72.4370;InbreedingCoeff=0.9885;MQ=74.67;MQ0=0;MQRankSum=-0.022;QD=23.84;ReadPosRankSum=1.898;VQSLOD=5.6634;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.03:0,75,686	1/1:0,8:8:24.07:277,24,0	0/0:14,0:14:25.23:0,25,282	0/0:8,0:7:21:0,21,188	1/1:3,26:29:75.14:836,75,0	1/1:3,0:17:31.25:159,31,0	1/1:3,0:19:39.77:202,40,0	1/1:5,0:33:78.59:395,79,0	1/1:3,0:15:34.09:173,34,0	1/1:3,23:26:69.16:782,69,0	1/1:2,22:24:63.11:699,63,0	0/0:18,0:18:51.01:0,51,462	0/0:24,0:24:59.99:0,60,539	1/1:5,21:26:69.19:784,69,0	1/1:2,26:28:75.22:862,75,0	1/1:1,0:22:53.97:274,54,0	1/1:0,1:20:45.62:251,46,0	0/0:28,0:27:75.03:0,75,686	1/1:1,13:14:36.11:415,36,0	1/1:4,36:40:99:1218,108,0	1/1:2,11:13:30.09:346,30,0	0/0:10,0:10:27.01:0,27,247	0/0:19,0:19:57.03:0,57,522	0/0:16,0:16:48.03:0,48,439	1/1:0,0:8:19.89:101,20,0	1/1:5,27:32:81.23:924,81,0	1/1:2,41:43:99:1282,112,0	1/1:3,3:6:9.03:104,9,0
chr10	77900345	.	G	GTTCA	10702.82	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-16.021;DP=670;FS=2.584;HRun=0;HaplotypeScore=127.7470;InbreedingCoeff=0.9706;MQ=63.64;MQ0=0;MQRankSum=-1.092;QD=44.97;ReadPosRankSum=-2.057;VQSLOD=5.1017;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:33.11:0,33,538	0/0:2,0:7:12.01:0,12,112	0/0:13,0:10:11.85:0,12,132	0/0:6,0:6:6.02:0,6,93	0/0:8,0:47:99:0,103,949	1/1:9,20:29:57.20:1386,57,0	1/1:2,12:14:21.07:507,21,0	1/1:19,16:41:30.47:1460,30,0	1/1:6,13:19:33.11:803,33,0	0/0:12,0:40:79.90:0,80,731	0/0:7,0:28:53.28:0,53,482	0/0:26,0:26:66.21:0,66,1049	0/0:15,0:15:45.15:0,45,729	0/0:2,0:19:42.01:0,42,380	1/1:3,27:31:72.25:1715,72,0	1/1:9,18:28:48.16:1130,48,0	1/1:4,14:18:39.13:946,39,0	1/1:5,10:15:27.09:640,27,0	0/0:15,0:14:15.05:0,15,245	0/0:29,0:29:63.20:0,63,1004	0/0:17,0:17:42.13:0,42,656	0/0:22,0:22:57.19:0,57,909	0/0:29,0:29:66.22:0,66,1058	0/0:17,0:17:33.07:0,33,510	1/1:10,32:43:87.30:2115,87,0	0/0:7,0:30:67.29:0,67,611	0/0:28,0:28:63.20:0,63,1001	0/0:3,0:22:54.06:0,54,503
chr10	77902342	.	TTCCCTCCC	T	279.03	PASS	AB=1.000;AC=11;AF=0.458;AN=24;BaseQRankSum=-1.200;DP=144;FS=2.702;HRun=0;HaplotypeScore=43.6231;InbreedingCoeff=0.2995;MQ=84.26;MQ0=5;MQRankSum=-0.400;QD=7.15;ReadPosRankSum=1.644;VQSLOD=1.2106;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:3:0,3,26	./.	./.	./.	./.	./.	./.	./.	./.	1/1:6,4:10:9.03:128,9,0	0/0:4,0:3:0.94:0,1,2	./.	0/0:1,0:1:3.01:0,3,89	1/1:8,0:8:2.69:15,3,0	./.	./.	0/0:7,0:6:3:0,3,28	./.	1/1:5,0:4:6.02:84,6,0	./.	./.	./.	0/0:4,0:4:6.02:0,6,168	0/0:6,0:6:0:0,0,0	./.	1/1:8,0:7:2.28:95,2,0	0/1:4,0:4:13.97:14,0,27	1/1:4,0:4:3.01:40,3,0
chr10	77902367	.	TCCCTCC	T	320.96	PASS	AB=1.000;AC=13;AF=0.406;AN=32;BaseQRankSum=-1.023;DP=65;FS=2.172;HRun=0;HaplotypeScore=23.7778;InbreedingCoeff=0.1885;MQ=35.23;MQ0=8;MQRankSum=-0.217;QD=10.70;ReadPosRankSum=1.023;VQSLOD=1.3189;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:1:3:0,3,26	./.	./.	./.	./.	./.	./.	1/1:4,0:1:2.97:20,3,0	0/0:3,0:3:1.72:0,2,4	1/1:5,0:5:9.03:128,9,0	0/0:4,0:4:0.94:0,1,2	./.	0/0:1,0:1:3.01:0,3,66	1/1:3,0:3:2.77:15,3,0	./.	./.	0/0:3,0:2:3:0,3,28	0/1:4,0:5:13.52:14,0,18	1/1:4,0:3:5.99:84,6,0	./.	0/0:3,0:2:0:0,0,0	./.	0/0:2,0:2:6.02:0,6,158	0/0:1,0:1:0:0,0,0	./.	1/1:1,4:5:8.98:120,9,0	0/1:2,0:2:13.97:14,0,27	0/1:2,0:2:12.82:34,0,13
chr10	77905826	.	TA	T	3973.36	PASS	AB=0.931;AC=49;AF=0.875;AN=56;BaseQRankSum=1.790;DP=483;FS=0.829;HRun=12;HaplotypeScore=104.0134;InbreedingCoeff=0.3424;MQ=66.08;MQ0=7;MQRankSum=-4.341;QD=9.31;ReadPosRankSum=2.541;VQSLOD=3.0206;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:25.72:0,26,231	1/1:2,0:6:8.14:23,8,0	0/1:39,1:16:18.92:32,0,19	0/0:42,0:12:8.84:0,9,64	1/1:13,0:23:11.83:59,12,0	1/1:3,6:9:20.87:157,21,0	1/1:6,9:15:32.82:247,33,0	1/1:8,15:23:59.61:438,60,0	1/1:7,8:15:13.03:265,13,0	1/1:15,0:22:21.68:82,22,0	1/1:4,0:17:16.26:66,16,0	0/1:10,0:10:17.12:17,0,24	1/1:11,1:12:10.99:89,11,0	1/1:10,0:14:5.54:16,6,0	1/1:10,12:22:48.03:344,48,0	1/1:2,6:8:20.87:157,21,0	1/1:11,7:18:10.74:189,11,0	1/1:4,7:11:3.15:135,3,0	1/1:9,3:12:16.73:119,17,0	1/1:5,15:21:34.81:370,35,0	0/1:7,2:8:17.49:55,0,17	1/1:6,9:15:0.46:138,0,0	1/1:9,6:15:24.19:186,24,0	1/1:11,3:14:11.91:93,12,0	1/1:3,19:22:54.41:400,54,0	1/1:8,0:14:15.26:49,15,0	1/1:9,7:16:23.11:239,23,0	1/1:9,0:24:3.90:11,4,0
chr10	77905838	.	AC	A	3377.71	PASS	AB=0.972;AC=46;AF=0.821;AN=56;BaseQRankSum=6.253;DP=540;FS=1.328;HRun=1;HaplotypeScore=131.5405;InbreedingCoeff=0.2533;MQ=54.50;MQ0=13;MQRankSum=-5.076;QD=7.17;ReadPosRankSum=3.589;VQSLOD=0.9708;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:7.14:7,0,218	0/0:9,0:9:1.01:0,1,57	0/1:43,2:13:12.30:34,0,12	0/0:44,4:10:4.73:0,5,70	1/1:24,0:24:30.04:189,30,0	1/1:9,0:9:23.27:120,23,0	1/1:17,0:17:42.92:254,43,0	1/1:29,0:26:36.10:174,36,0	1/1:17,0:17:16.88:136,17,0	1/1:27,0:26:28.21:209,28,0	1/1:19,0:19:41.68:204,42,0	0/0:12,0:12:3.27:0,3,14	0/1:12,1:13:20.37:39,0,20	1/1:16,0:16:29.56:146,30,0	1/1:17,0:17:41.80:203,42,0	1/1:11,0:11:24.50:124,25,0	1/1:16,0:16:23.70:134,24,0	1/1:8,0:8:11.23:45,11,0	1/1:14,0:13:5.35:128,5,0	1/1:25,0:25:53.73:307,54,0	1/1:8,0:7:0.74:70,1,0	1/1:13,0:13:0.26:18,0,0	0/1:20,0:20:28.67:29,0,109	1/1:11,1:12:3.13:24,3,0	1/1:28,0:28:71.76:400,72,0	1/1:25,0:24:38.32:182,38,0	1/1:24,0:23:30.42:159,30,0	1/1:17,0:17:8.39:43,8,0
chr10	77905839	.	CAAAAA	C	6654.26	PASS	AB=0.944;AC=26;AF=0.464;AN=56;BaseQRankSum=5.393;DP=553;FS=3.565;HRun=13;HaplotypeScore=157.9013;InbreedingCoeff=0.8094;MQ=54.14;MQ0=13;MQRankSum=-5.825;QD=23.51;ReadPosRankSum=3.791;VQSLOD=2.3096;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:30.03:0,30,576	0/0:8,0:9:26.91:0,27,423	0/0:45,0:14:5.26:0,5,23	0/1:48,0:9:9.58:17,0,10	0/0:13,0:25:60.41:0,60,589	1/1:5,5:10:24:331,24,0	1/1:12,6:18:47.97:661,48,0	1/1:33,0:30:71.12:661,71,0	1/1:14,4:18:38.80:456,39,0	0/0:13,0:26:64.47:0,64,528	0/0:8,0:18:22.96:0,23,287	0/0:11,0:11:2.04:0,2,6	0/0:13,0:13:17.08:0,17,293	0/0:13,0:17:26.14:0,26,415	1/1:10,7:17:39.85:548,40,0	1/1:9,4:13:33.01:415,33,0	1/1:13,4:17:19.43:439,19,0	0/1:7,0:8:44.74:45,0,60	1/1:12,2:13:26.73:340,27,0	1/1:13,12:25:66.05:936,66,0	1/1:7,1:7:15.04:225,15,0	0/0:12,0:12:30.07:0,30,535	0/0:21,0:21:53.81:0,54,865	0/0:12,0:12:16.75:0,17,235	1/1:14,14:28:80.91:1051,81,0	0/0:19,0:25:53.80:0,54,433	1/1:21,5:25:41.50:528,41,0	0/0:15,0:16:8.90:0,9,66
chr10	77905847	.	A	AC	663.33	PASS	AB=0.951;AC=14;AF=0.250;AN=56;BaseQRankSum=3.528;DP=584;FS=1.663;HRun=0;HaplotypeScore=152.0007;InbreedingCoeff=-0.1517;MQ=50.88;MQ0=17;MQRankSum=-4.090;QD=2.19;ReadPosRankSum=2.550;VQSLOD=3.1263;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:30.04:0,30,365	0/0:10,0:10:29.97:0,30,327	0/0:48,0:9:1.06:0,1,60	0/1:57,1:14:6.68:25,0,7	0/0:24,0:24:66.58:0,67,521	0/1:13,0:13:9.05:12,0,9	0/1:15,2:17:40.12:44,0,40	0/1:32,3:32:99:209,0,101	0/1:15,1:16:40.79:80,0,41	0/0:29,0:28:77.46:0,77,628	0/0:17,0:17:49.97:0,50,379	0/0:12,0:12:5.89:0,6,51	0/0:11,0:11:17.05:0,17,175	0/0:17,0:17:50.42:0,50,400	1/1:16,0:16:5.87:98,6,0	0/1:15,0:15:38.13:58,0,38	0/1:19,2:21:45.20:45,0,101	0/0:12,0:12:12.59:0,13,98	0/1:16,0:14:12.32:12,0,67	0/1:27,1:28:61.47:61,0,141	0/1:11,1:11:7.31:7,0,70	0/0:11,0:11:29.99:0,30,339	0/0:24,0:24:62.33:0,62,674	0/0:12,0:12:17.87:0,18,173	0/1:28,2:30:81.80:123,0,82	0/0:23,0:22:59.70:0,60,473	0/1:24,1:25:41.39:41,0,68	0/0:18,0:18:17.91:0,18,141
chr10	77905852	.	AC	A	4304.88	PASS	AB=0.977;AC=46;AF=0.821;AN=56;BaseQRankSum=4.953;DP=578;FS=4.097;HRun=1;HaplotypeScore=142.4040;InbreedingCoeff=-0.0458;MQ=53.12;MQ0=18;MQRankSum=-3.083;QD=7.61;ReadPosRankSum=4.645;VQSLOD=2.4451;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:1.66:0,2,192	1/1:10,1:11:19.79:75,20,0	0/1:42,3:11:16.08:16,0,27	0/1:53,2:14:22.31:22,0,24	0/1:27,0:27:14.53:181,0,15	1/1:13,0:13:21.59:137,22,0	1/1:17,0:17:45.21:263,45,0	1/1:38,0:35:68.40:320,68,0	1/1:16,0:16:41.12:221,41,0	1/1:27,0:26:15.69:241,16,0	1/1:16,0:16:37.11:193,37,0	1/1:12,0:12:5.39:30,5,0	0/1:12,0:12:6.15:25,0,6	1/1:16,0:16:7.21:169,7,0	1/1:15,0:15:41.13:296,41,0	1/1:15,0:15:31.57:176,32,0	1/1:21,0:21:35.92:216,36,0	1/1:9,0:9:22.15:115,22,0	1/1:17,0:15:32.47:168,32,0	1/1:25,0:25:54.79:266,55,0	0/1:13,0:12:31.78:32,0,35	0/1:10,1:11:36.44:44,0,36	0/1:26,0:26:36.21:86,0,36	0/1:13,0:13:1.88:33,0,2	1/1:30,0:30:80.17:470,80,0	1/1:25,1:25:51.93:254,52,0	1/1:27,1:27:37.79:207,38,0	1/1:11,0:11:10.23:48,10,0
chr10	77905853	.	CA	C	5373.86	PASS	AB=0.734;AC=48;AF=0.857;AN=56;BaseQRankSum=-1.439;DP=576;FS=11.484;HRun=13;HaplotypeScore=137.9561;InbreedingCoeff=0.5383;MQ=53.20;MQ0=18;MQRankSum=-0.161;QD=11.58;ReadPosRankSum=3.308;VQSLOD=3.0871;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:20.72:0,21,202	1/1:5,5:11:3.82:159,4,0	0/0:44,0:11:9.90:0,10,80	0/0:53,0:14:5.22:0,5,53	1/1:8,19:27:23.03:381,23,0	1/1:13,0:13:23.50:147,23,0	1/1:17,0:17:41.61:269,42,0	1/1:39,0:36:9.16:240,9,0	1/1:16,0:16:21.76:187,22,0	1/1:4,20:24:54.34:380,54,0	1/1:6,10:16:44.85:352,45,0	1/1:1,11:12:2.91:24,3,0	1/1:4,7:11:11.62:79,12,0	1/1:9,5:16:32.76:221,33,0	1/1:15,0:15:23.17:152,23,0	1/1:15,0:15:19.38:153,19,0	1/1:22,0:22:33.93:254,34,0	0/1:7,0:9:8.42:8,0,21	1/1:7,9:15:7.98:189,8,0	1/1:4,21:25:44.83:480,45,0	0/1:6,7:12:59:69,0,59	1/1:9,2:11:17.77:138,18,0	1/1:9,17:26:7.62:277,8,0	1/1:4,9:13:8.95:73,9,0	1/1:30,0:30:45.16:378,45,0	1/1:7,19:25:55.54:429,56,0	1/1:6,20:27:34.01:238,34,0	1/1:10,1:11:11.17:96,11,0
chr10	77905864	.	AC	A	5278.64	PASS	AB=0.966;AC=37;AF=0.661;AN=56;BaseQRankSum=8.994;DP=562;FS=5.929;HRun=1;HaplotypeScore=128.8506;InbreedingCoeff=-0.2473;MQ=61.13;MQ0=14;MQRankSum=-8.343;QD=9.60;ReadPosRankSum=4.799;VQSLOD=2.7663;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:21.21:0,21,225	0/1:11,1:12:9.91:51,0,10	0/1:39,2:14:13.97:14,0,64	0/1:46,2:17:6.01:6,0,54	0/1:26,1:27:86.57:97,0,87	1/1:0,15:15:24.08:305,24,0	1/1:2,16:18:47.99:594,48,0	1/1:5,31:33:87.80:897,88,0	1/1:1,14:15:38.95:465,39,0	0/1:28,0:27:90.51:102,0,91	1/1:15,1:16:9.90:110,10,0	0/1:14,0:14:4.01:4,0,60	0/1:10,2:12:26.73:27,0,62	0/1:16,0:16:47.81:48,0,65	1/1:0,10:10:24.07:297,24,0	1/1:0,14:14:30.09:379,30,0	1/1:4,20:24:47.46:574,47,0	0/1:9,0:10:6.24:6,0,57	0/1:15,1:14:28.05:49,0,28	0/1:26,0:26:39.12:39,0,63	0/1:12,0:12:4.83:5,0,68	0/1:9,0:9:15.89:34,0,16	0/1:24,1:25:26.54:135,0,27	0/1:11,1:12:13.13:13,0,14	1/1:2,26:28:77.48:905,77,0	0/1:27,1:27:23.47:23,0,141	0/1:30,1:30:77.84:78,0,82	1/1:6,0:6:7.96:21,8,0
chr10	77907609	.	T	TAC	2157.85	PASS	AB=0.983;AC=24;AF=0.429;AN=56;BaseQRankSum=6.165;DP=565;FS=12.382;HRun=0;HaplotypeScore=117.3141;InbreedingCoeff=0.7034;MQ=58.37;MQ0=15;MQRankSum=-3.099;QD=8.60;ReadPosRankSum=-2.000;VQSLOD=2.4360;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:93.26:0,93,1163	0/1:7,0:7:9.85:10,0,104	0/0:31,0:22:41.04:0,41,457	0/0:29,0:22:46.02:0,46,564	0/0:13,0:13:12.04:0,12,154	1/1:14,0:12:2.99:23,3,0	1/1:27,1:28:14.39:647,14,0	1/1:7,9:15:27.08:398,27,0	1/1:14,1:13:3.01:35,3,0	0/0:19,0:17:0.43:0,0,393	0/0:11,0:11:18.04:0,18,221	0/0:30,0:30:56.18:0,56,553	0/0:14,0:14:36:0,36,391	0/0:20,0:20:17.87:0,18,395	1/1:19,0:18:5.73:34,6,0	1/1:10,0:9:6:59,6,0	0/1:27,1:27:26.50:109,0,26	0/0:37,0:37:50.99:0,51,642	1/1:18,1:16:18.48:338,18,0	1/1:20,0:19:14.81:117,15,0	1/1:37,1:33:29.96:263,30,0	0/0:7,0:7:17.94:0,18,153	0/0:9,0:9:11.66:0,12,121	0/0:34,1:34:53.93:0,54,546	1/1:20,0:19:5.67:62,6,0	0/0:13,0:12:30.08:0,30,365	1/1:17,0:17:31.38:264,31,0	0/0:9,0:9:9.22:0,9,149
chr10	77907616	.	A	ACACACGCACG	4193.24	PASS	AB=0.956;AC=25;AF=0.446;AN=56;BaseQRankSum=0.645;DP=584;FS=14.999;HRun=0;HaplotypeScore=175.0266;InbreedingCoeff=0.0857;MQ=53.69;MQ0=15;MQRankSum=-4.527;QD=11.49;ReadPosRankSum=-2.243;VQSLOD=1.3662;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:97.52:0,98,1992	0/1:9,0:9:53:267,0,53	0/0:32,0:19:39.78:0,40,454	0/0:30,0:18:48.12:0,48,684	0/0:12,0:12:12.04:0,12,154	1/1:4,9:13:3.01:158,3,0	1/1:34,0:34:26.72:994,27,0	1/1:13,0:12:30.95:447,31,0	1/1:6,9:16:2.68:157,3,0	0/1:19,0:17:99:234,0,271	0/0:11,0:11:17.81:0,18,186	0/0:11,0:31:57.66:0,58,1137	0/0:9,0:13:36.12:0,36,707	0/1:21,0:21:99:125,0,377	1/1:4,11:19:2.60:157,3,0	1/1:2,8:12:6.02:315,6,0	0/1:2,24:33:26.63:383,0,27	0/1:36,0:36:50.75:51,0,528	0/1:19,0:16:99:258,0,126	0/1:18,0:17:46.07:46,0,107	0/1:31,0:26:40.82:149,0,41	0/0:3,0:9:16.09:0,16,373	0/0:3,0:9:11.68:0,12,232	0/0:16,0:33:54.09:0,54,1048	1/1:3,16:21:7.19:214,7,0	0/1:16,0:15:11.72:12,0,188	0/1:17,0:17:99:134,0,175	0/1:10,0:10:91.20:91,0,139
chr10	77907618	.	ACG	A	2311.87	PASS	AB=0.963;AC=17;AF=0.304;AN=56;BaseQRankSum=5.494;DP=565;FS=0.966;HRun=0;HaplotypeScore=114.2057;InbreedingCoeff=0.3083;MQ=53.21;MQ0=16;MQRankSum=0.047;QD=9.07;ReadPosRankSum=5.619;VQSLOD=3.3940;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:95.77:0,96,1468	0/0:9,0:9:23.93:0,24,325	0/0:32,0:19:40.97:0,41,457	0/0:31,0:17:30.65:0,31,533	0/0:12,0:12:11.73:0,12,154	0/0:12,1:11:2.98:0,3,22	0/1:22,12:34:99:446,0,207	1/1:13,0:12:3.45:278,3,0	0/0:16,1:15:8.90:0,9,62	0/0:19,0:17:53.52:0,54,642	0/0:11,0:11:18.06:0,18,266	0/1:31,0:31:48.42:48,0,261	0/1:13,0:13:5.13:5,0,223	0/0:21,0:21:41.35:0,41,567	0/0:13,1:13:2.45:0,2,19	0/0:11,1:11:5.90:0,6,38	0/1:31,0:30:59.08:59,0,61	0/0:35,0:35:55.73:0,56,716	1/1:5,13:15:22.69:448,23,0	1/1:1,16:16:18.06:246,18,0	1/1:11,19:25:32.72:410,33,0	0/1:9,0:9:23.06:23,0,47	0/1:8,0:8:8.83:9,0,66	0/1:34,0:33:38.18:38,0,295	0/0:18,2:19:3.91:0,4,19	0/0:16,0:15:36.73:0,37,519	1/1:1,16:17:36.11:479,36,0	0/0:9,0:9:15.02:0,15,193
chr10	77907644	.	G	GCACGCACGCACA	3702.89	PASS	AB=0.952;AC=24;AF=0.429;AN=56;BaseQRankSum=-1.907;DP=574;FS=13.005;HRun=0;HaplotypeScore=178.0429;InbreedingCoeff=0.2996;MQ=50.25;MQ0=14;MQRankSum=-2.599;QD=10.92;ReadPosRankSum=1.404;VQSLOD=1.2895;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:77.83:0,78,1472	1/1:14,0:14:30.04:593,30,0	0/0:24,0:4:8.83:0,9,53	0/1:34,0:13:0.72:1,0,206	0/1:1,13:16:0:0,0,0	0/1:10,0:10:71.93:80,0,72	0/1:40,0:39:99:172,0,189	0/1:10,0:10:76.17:76,0,90	0/1:15,0:14:90:90,0,98	1/1:16,0:16:48.11:879,48,0	1/1:16,0:16:23.89:187,24,0	0/0:27,0:27:51.03:0,51,1082	0/0:9,0:9:27.01:0,27,525	1/1:3,12:22:5.41:294,5,0	0/1:16,0:16:76.20:76,0,105	0/1:16,0:16:99:164,0,108	0/1:22,0:22:94.87:198,0,95	1/1:2,0:46:11.33:106,11,0	0/0:13,0:16:40.82:0,41,414	0/0:8,0:12:20.98:0,21,291	0/0:22,0:20:32.02:0,32,370	0/0:10,0:10:21:0,21,402	0/0:14,0:14:26.45:0,26,339	0/0:39,0:39:71.76:0,72,1085	0/1:17,0:17:58.47:84,0,58	1/1:14,0:14:39.03:500,39,0	0/0:15,0:21:40.95:0,41,516	1/1:2,6:11:5.97:203,6,0
chr10	77908143	.	TA	T	4306.85	PASS	AB=0.652;AC=31;AF=0.554;AN=56;BaseQRankSum=-8.070;DP=557;FS=2.483;HRun=13;HaplotypeScore=74.1442;InbreedingCoeff=0.8630;MQ=71.41;MQ0=1;MQRankSum=-0.466;QD=13.05;ReadPosRankSum=1.915;VQSLOD=5.3473;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,3:31:30.73:0,31,575	1/1:3,9:13:22.89:159,23,0	0/0:21,0:11:5.58:0,6,45	0/0:15,0:14:10.02:0,10,64	1/1:7,20:28:64.53:455,65,0	1/1:9,19:28:44.68:328,45,0	1/1:1,12:13:32.80:241,33,0	1/1:6,17:23:27.33:300,27,0	1/1:1,7:8:14.91:109,15,0	1/1:9,19:28:59.45:428,59,0	1/1:7,14:21:9.49:228,9,0	0/0:9,0:15:29.20:0,29,158	0/0:1,0:23:44.47:0,44,212	1/1:5,9:14:14.86:109,15,0	1/1:3,11:14:26.83:197,27,0	0/1:7,8:15:8.24:110,0,8	1/1:5,27:30:62.64:460,63,0	1/1:5,23:28:50.66:372,51,0	0/0:13,0:18:7.41:0,7,98	0/0:9,0:34:51.26:0,51,276	0/0:2,0:3:2.84:0,3,14	0/0:4,0:17:31.59:0,32,172	0/0:8,0:21:28.89:0,29,182	0/0:3,0:14:23.76:0,24,121	1/1:5,18:23:35.78:263,36,0	1/1:7,16:24:45.74:346,46,0	0/0:2,0:13:14.59:0,15,83	1/1:6,12:18:28.96:202,29,0
chr10	77912162	.	G	GCATA	1559.90	PASS	AB=0.784;AC=14;AF=0.250;AN=56;BaseQRankSum=-4.337;DP=533;FS=7.759;HRun=0;HaplotypeScore=100.9132;InbreedingCoeff=0.6763;MQ=65.80;MQ0=15;MQRankSum=-1.159;QD=9.94;ReadPosRankSum=-4.463;VQSLOD=0.5619;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:68.85:0,69,631	0/0:6,0:8:20.88:0,21,160	0/0:31,0:19:40.98:0,41,416	0/0:30,0:15:37.58:0,38,328	0/0:17,0:24:32.87:0,33,277	1/1:16,0:16:13.69:226,14,0	0/1:12,0:12:47.95:156,0,48	1/1:34,0:33:84.32:709,84,0	1/1:2,13:16:3.01:69,3,0	0/0:24,0:24:59.79:0,60,527	0/0:9,0:14:23.95:0,24,195	0/0:11,0:16:41.97:0,42,418	0/0:14,0:14:38.87:0,39,320	0/0:7,0:16:2.02:0,2,224	0/1:5,15:20:7.91:255,0,8	1/1:2,12:15:8.91:124,9,0	1/1:5,15:21:3.01:82,3,0	0/0:13,0:18:29.97:0,30,268	0/0:14,0:11:21.26:0,21,160	0/0:21,0:24:65.91:0,66,579	0/0:23,0:21:41.86:0,42,328	0/0:7,0:14:26.91:0,27,258	0/0:11,0:16:23.83:0,24,204	0/0:13,0:16:35.48:0,35,319	1/1:4,16:22:5.96:108,6,0	0/0:18,0:23:65.84:0,66,564	0/0:7,0:7:17.22:0,17,152	0/0:6,0:7:20.93:0,21,176
chr10	77912651	.	C	CA	3631.96	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-4.309;DP=587;FS=5.218;HRun=4;HaplotypeScore=79.1000;InbreedingCoeff=0.9952;MQ=84.11;MQ0=0;MQRankSum=0.042;QD=33.63;ReadPosRankSum=1.381;VQSLOD=4.3096;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.19:0,81,896	0/0:10,0:10:21.06:0,21,238	0/0:19,0:19:47.92:0,48,523	0/0:18,0:18:32.76:0,33,350	0/0:22,0:22:48.13:0,48,544	0/0:18,0:18:50.88:0,51,556	0/0:23,0:23:48.13:0,48,545	0/0:35,0:35:93.25:0,93,1040	0/0:22,0:22:63.16:0,63,705	0/0:28,0:28:78.20:0,78,872	0/0:24,0:24:54.15:0,54,607	0/0:20,0:20:60.17:0,60,681	0/0:22,0:22:66.19:0,66,748	0/0:18,0:18:54.15:0,54,612	0/0:24,0:24:69.18:0,69,773	0/0:25,0:25:66.18:0,66,748	0/0:18,0:18:49.66:0,50,529	1/1:2,13:15:33.11:451,33,0	1/1:5,24:28:72.15:885,72,0	1/1:1,19:20:51.17:698,51,0	1/1:0,21:21:57.19:777,57,0	0/0:21,0:21:63.18:0,63,714	0/0:9,0:9:15.04:0,15,170	0/0:13,0:13:36.10:0,36,408	0/0:17,0:17:51.15:0,51,578	0/0:30,0:30:84.24:0,84,952	1/1:1,22:23:60.20:821,60,0	0/0:15,0:15:42.12:0,42,475
chr10	77913413	.	AT	A	7686.81	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=13.313;DP=548;FS=10.823;HRun=5;HaplotypeScore=52.1454;InbreedingCoeff=0.9937;MQ=67.92;MQ0=0;MQRankSum=-0.639;QD=28.47;ReadPosRankSum=0.236;VQSLOD=4.3700;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.25:0,75,1026	0/0:5,0:5:15.05:0,15,205	0/0:9,0:9:23.97:0,24,279	0/0:7,0:7:18.05:0,18,222	0/0:35,0:34:96.30:0,96,1280	1/1:1,21:22:51.15:578,51,0	1/1:3,16:19:39.11:442,39,0	1/1:6,36:42:99:1190,108,0	1/1:0,19:19:57.16:647,57,0	0/0:24,0:24:56.70:0,57,738	0/0:17,0:17:48.16:0,48,655	1/1:0,11:11:33.09:374,33,0	1/1:0,27:27:75.21:851,75,0	0/0:12,0:12:33.11:0,33,449	1/1:1,18:19:51.14:576,51,0	1/1:1,14:15:42.12:476,42,0	1/1:2,21:23:57.16:647,57,0	0/0:15,0:15:42.14:0,42,574	0/0:23,0:23:60.20:0,60,821	0/0:24,0:24:72.24:0,72,984	0/0:8,0:8:24.07:0,24,312	1/1:1,15:16:36.10:408,36,0	1/1:1,18:19:48.14:544,48,0	1/1:1,5:6:15.04:170,15,0	1/1:2,30:32:69.20:783,69,0	0/0:29,0:29:81.21:0,81,1061	0/0:32,0:30:96.31:0,96,1298	0/0:12,0:12:27.09:0,27,369
chr10	77913747	.	TACACACAC	T	553.65	PASS	AB=0.875;AC=17;AF=0.315;AN=54;BaseQRankSum=1.950;DP=390;FS=0.000;HRun=0;HaplotypeScore=112.2265;InbreedingCoeff=0.4942;MQ=56.78;MQ0=14;MQRankSum=-1.924;QD=4.65;ReadPosRankSum=2.158;VQSLOD=1.9585;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:15.02:0,15,337	0/0:4,0:3:8.24:0,8,121	./.	0/0:17,0:11:3.01:0,3,41	1/1:13,0:11:0.01:0,0,0	1/1:10,1:12:5.99:48,6,0	1/1:23,6:30:0.47:1,0,0	1/1:13,0:11:0.14:33,0,0	1/1:3,2:5:3.01:76,3,0	0/0:11,0:11:23.29:0,23,459	1/1:5,0:5:1.72:6,2,0	0/0:12,0:12:12.50:0,12,372	0/0:13,0:14:12.06:0,12,298	0/0:13,0:11:9:0,9,118	1/1:6,1:7:6.02:110,6,0	1/1:10,3:13:9:125,9,0	0/1:18,2:20:30.42:293,0,30	0/0:12,0:14:20.02:0,20,321	0/0:12,0:11:15.68:0,16,169	0/0:8,0:7:6.02:0,6,107	0/0:25,0:21:6.02:0,6,108	0/0:13,0:13:12.04:0,12,392	0/0:7,0:6:3.01:0,3,89	0/0:31,0:37:66.22:0,66,2042	0/0:16,4:18:0.86:0,1,2	0/0:10,0:10:12.04:0,12,210	0/0:13,0:13:6.02:0,6,90	0/0:5,0:5:6.02:0,6,124
chr10	77913828	.	GCGCA	G	1795.56	PASS	AB=1.000;AC=36;AF=0.857;AN=42;BaseQRankSum=0.640;DP=292;FS=6.549;HRun=0;HaplotypeScore=145.3404;InbreedingCoeff=0.3655;MQ=41.16;MQ0=11;MQRankSum=0.599;QD=7.48;ReadPosRankSum=0.829;VQSLOD=2.4287;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:9.03:0,9,169	1/1:3,1:4:5.79:65,6,0	./.	./.	0/1:7,0:6:1.06:36,0,1	1/1:8,2:10:2.93:23,3,0	1/1:27,2:28:17.76:150,18,0	1/1:12,0:10:12.03:140,12,0	1/1:9,0:8:5.85:71,6,0	1/1:17,0:16:11.16:113,11,0	1/1:7,0:7:8.05:45,8,0	./.	1/1:7,1:8:9.03:133,9,0	1/1:17,1:16:10.36:66,10,0	1/1:10,1:11:11.94:92,12,0	1/1:7,2:9:11.83:105,12,0	1/1:24,2:24:41.35:336,41,0	0/1:10,0:10:13.56:38,0,14	./.	./.	./.	./.	0/0:5,3:8:2.68:0,3,18	1/1:25,1:25:8.74:133,9,0	1/1:9,5:14:14.73:114,15,0	1/1:11,0:11:13.95:120,14,0	1/1:5,0:5:0.81:2,1,0	1/1:7,0:7:12.78:127,13,0
chr10	77913844	.	ACG	A	124.80	PASS	AB=1.000;AC=8;AF=0.154;AN=52;BaseQRankSum=2.552;DP=314;FS=4.566;HRun=0;HaplotypeScore=125.2992;InbreedingCoeff=0.2754;MQ=42.56;MQ0=10;MQRankSum=-3.304;QD=2.84;ReadPosRankSum=2.338;VQSLOD=2.3194;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:18.03:0,18,280	0/0:5,0:5:0.40:0,0,13	0/0:4,0:2:3.01:0,3,58	0/0:10,0:7:17.22:0,17,205	0/0:8,0:8:6.36:0,6,92	0/0:11,0:11:11.95:0,12,119	0/0:29,0:28:41.95:0,42,363	0/0:13,0:12:25.37:0,25,238	0/0:14,0:13:7.69:0,8,135	0/0:13,0:13:19.35:0,19,168	0/1:6,0:6:1.24:1,0,11	0/0:16,0:16:12.02:0,12,153	0/0:12,0:12:13.65:0,14,203	0/0:17,0:16:3.84:0,4,66	0/0:10,0:10:11.78:0,12,73	0/0:6,0:6:4.93:0,5,31	0/0:28,0:27:41.30:0,41,295	1/1:1,7:8:14.70:203,15,0	1/1:7,0:1:0.47:1,0,0	./.	./.	0/0:4,0:4:6.02:0,6,86	0/0:13,0:13:17.53:0,18,222	0/0:24,0:23:11.71:0,12,148	0/0:14,0:14:20.21:0,20,142	0/1:10,0:10:8.22:8,0,148	0/1:5,0:5:1.10:12,0,1	0/1:8,0:7:8.61:9,0,47
chr10	77913850	.	GCA	G	2880.98	PASS	AB=0.843;AC=28;AF=0.519;AN=54;BaseQRankSum=2.271;DP=319;FS=6.445;HRun=0;HaplotypeScore=112.2621;InbreedingCoeff=0.5444;MQ=43.09;MQ0=8;MQRankSum=0.213;QD=14.70;ReadPosRankSum=4.492;VQSLOD=2.8610;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:12:21.07:0,21,315	1/1:3,3:6:11.39:112,11,0	0/0:6,0:2:6:0,6,67	0/0:14,0:11:24.02:0,24,300	0/1:7,1:8:28.77:29,0,39	1/1:3,9:12:11.95:114,12,0	1/1:13,13:25:35.87:417,36,0	1/1:14,0:13:11.46:160,11,0	1/1:11,2:12:11.98:116,12,0	1/1:12,2:14:28.43:255,28,0	0/1:3,3:6:32.12:82,0,32	0/0:18,0:18:15.05:0,15,201	0/0:13,0:13:10.44:0,10,209	1/1:8,5:12:6.41:156,6,0	1/1:1,9:10:11.99:183,12,0	1/1:2,4:6:13.24:162,13,0	1/1:7,19:24:55:707,55,0	0/1:11,0:11:37.27:79,0,37	0/0:4,0:1:2.97:0,3,20	0/0:5,0:5:3:0,3,25	./.	0/0:4,0:4:6.01:0,6,66	0/0:12,0:12:14.52:0,15,176	0/0:23,0:22:5.63:0,6,115	1/1:7,8:15:17.05:248,17,0	0/1:7,2:9:38.13:121,0,38	0/0:6,0:6:10.48:0,10,67	1/1:6,1:6:14.75:136,15,0
chr10	77913856	.	G	GCA	2951.12	PASS	AB=0.882;AC=31;AF=0.554;AN=56;BaseQRankSum=-0.131;DP=362;FS=8.325;HRun=0;HaplotypeScore=126.3509;InbreedingCoeff=0.3427;MQ=44.33;MQ0=6;MQRankSum=-0.312;QD=12.78;ReadPosRankSum=0.755;VQSLOD=3.2824;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:26.97:0,27,276	0/1:7,2:9:18.31:135,0,18	0/0:11,0:6:14.92:0,15,142	0/0:13,0:12:23.67:0,24,225	0/1:5,4:9:4.83:5,0,32	1/1:13,0:13:15.01:189,15,0	1/1:25,1:25:4.31:361,4,0	1/1:6,10:16:1.12:392,1,0	1/1:5,8:12:9.02:122,9,0	1/1:9,6:15:30.01:397,30,0	0/1:6,1:8:23.77:67,0,24	0/0:17,0:18:15:0,15,163	0/0:14,0:14:27.05:0,27,305	0/1:11,2:12:14.63:226,0,15	0/1:12,0:12:10.07:81,0,10	0/1:7,0:7:17.18:129,0,17	1/1:25,3:26:23.29:489,23,0	0/0:12,0:13:18.31:0,18,236	1/1:5,0:4:2.37:20,2,0	1/1:8,0:8:5.95:44,6,0	1/1:9,0:9:3:25,3,0	0/0:5,0:6:12.02:0,12,130	0/0:11,0:11:8.10:0,8,137	0/0:26,0:25:23.69:0,24,284	1/1:15,1:16:24:248,24,0	0/1:9,1:10:17.85:141,0,18	1/1:7,0:7:2.64:33,3,0	1/1:6,0:5:5.37:35,5,0
chr10	77913889	.	TA	T	5431.30	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-0.856;DP=458;FS=0.392;HRun=9;HaplotypeScore=110.3205;InbreedingCoeff=0.9886;MQ=73.23;MQ0=1;MQRankSum=-3.867;QD=21.90;ReadPosRankSum=1.776;VQSLOD=4.5305;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:36.08:0,36,403	1/1:2,10:12:24.01:219,24,0	0/0:25,0:23:50.98:0,51,519	0/0:22,0:21:28.58:0,29,217	1/1:0,15:15:38.97:349,39,0	0/0:14,0:14:36.02:0,36,386	0/0:25,0:25:74.78:0,75,824	0/0:27,0:27:66.17:0,66,739	0/0:15,0:15:27.01:0,27,295	1/1:1,17:18:50.98:452,51,0	1/1:2,10:12:27.01:247,27,0	1/1:2,19:21:54.03:493,54,0	1/1:0,16:16:44.89:411,45,0	1/1:2,8:10:20.91:181,21,0	0/0:11,0:11:30.08:0,30,337	0/0:9,0:9:24.06:0,24,267	0/0:31,0:29:65.47:0,65,843	1/1:5,10:15:24.01:219,24,0	1/1:4,8:11:20.99:187,21,0	1/1:0,19:19:56.95:511,57,0	1/1:1,13:14:26.92:230,27,0	1/1:1,9:10:27.01:247,27,0	1/1:1,12:13:33.02:302,33,0	1/1:2,26:27:62.74:534,63,0	0/0:17,0:17:42.60:0,43,485	1/1:0,19:19:57.03:520,57,0	1/1:2,9:11:27.01:247,27,0	1/1:0,3:3:9:82,9,0
chr10	77914015	.	A	ATATAG	36188.87	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-6.446;DP=588;FS=4.182;HRun=0;HaplotypeScore=102.5289;InbreedingCoeff=0.9898;MQ=82.75;MQ0=1;MQRankSum=-9.817;QD=69.86;ReadPosRankSum=3.300;VQSLOD=6.5237;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.17:0,66,1285	1/1:0,6:7:14.99:440,15,0	0/0:18,0:19:34.29:0,34,885	0/0:25,0:25:57.16:0,57,1054	1/1:4,12:16:39.13:1153,39,0	1/1:3,13:17:36.07:1008,36,0	1/1:4,21:27:51.17:1538,51,0	1/1:16,30:50:99:3826,138,0	1/1:1,26:28:69.09:2124,69,0	1/1:2,18:20:54.17:1559,54,0	1/1:3,11:15:39.13:1140,39,0	1/1:2,26:30:81:2443,81,0	1/1:2,16:18:44.52:1296,45,0	1/1:4,13:19:42.14:1273,42,0	1/1:5,20:25:60.21:1779,60,0	1/1:2,12:16:36.12:1082,36,0	1/1:3,8:13:24.08:706,24,0	1/1:1,17:20:42.14:1256,42,0	1/1:7,13:23:54.16:1481,54,0	1/1:2,28:30:87.30:2601,87,0	1/1:5,13:22:36.12:1082,36,0	1/1:5,12:18:36.12:1042,36,0	1/1:2,8:11:17.83:530,18,0	1/1:3,14:19:36.12:1076,36,0	1/1:5,11:16:42.14:1231,42,0	1/1:2,25:28:81.25:2360,81,0	1/1:2,14:16:45.15:1355,45,0	1/1:1,10:13:27.09:807,27,0
chr10	77915356	.	C	CT	2913.91	PASS	AB=0.804;AC=22;AF=0.393;AN=56;BaseQRankSum=-4.165;DP=558;FS=0.000;HRun=12;HaplotypeScore=67.3534;InbreedingCoeff=0.6942;MQ=64.41;MQ0=0;MQRankSum=-0.227;QD=11.89;ReadPosRankSum=-2.776;VQSLOD=2.6452;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,2:40:56.29:0,56,566	1/1:2,4:7:14.86:131,15,0	0/0:16,0:13:4:0,4,83	0/1:15,0:10:4.31:4,0,56	1/1:10,24:34:6.75:523,7,0	0/0:16,0:16:35.79:0,36,263	0/0:18,0:19:45.80:0,46,316	0/0:21,0:20:29.77:0,30,218	0/0:15,0:15:32.77:0,33,239	1/1:6,16:23:5.24:374,5,0	1/1:8,13:21:30.52:293,31,0	0/0:19,0:21:40.75:0,41,290	0/0:18,0:18:40.95:0,41,299	1/1:6,13:19:29.96:275,30,0	0/0:21,2:23:30.45:0,30,387	0/0:16,0:16:23.75:0,24,175	0/0:40,0:40:86.41:0,86,632	0/0:18,0:18:32.72:0,33,237	0/1:11,6:18:1.80:156,0,2	1/1:9,12:21:11.10:259,11,0	1/1:4,8:13:26.88:248,27,0	0/0:16,0:16:29.50:0,29,208	0/1:12,2:15:28.53:29,0,145	0/0:16,0:16:38.76:0,39,284	0/0:17,0:17:29.74:0,30,219	1/1:8,13:23:22.77:335,23,0	0/1:8,19:28:8.68:373,0,9	1/1:0,8:8:12.02:117,12,0
chr10	77915762	.	ATTGTGAG	A	12246.63	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.884;DP=728;FS=5.719;HRun=0;HaplotypeScore=182.9579;InbreedingCoeff=0.9997;MQ=81.33;MQ0=2;MQRankSum=-17.790;QD=53.25;ReadPosRankSum=1.514;VQSLOD=4.3689;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,5210	0/0:15,0:15:45.14:0,45,1715	0/0:21,0:21:60.20:0,60,2120	0/0:28,0:28:72.25:0,72,2541	0/0:29,0:29:81.26:0,81,3084	0/0:26,0:26:78.27:0,78,3072	0/0:26,0:26:72.22:0,72,2389	0/0:26,0:26:72.22:0,72,2558	0/0:28,0:28:81.26:0,81,2970	0/0:30,0:30:90.31:0,90,3454	0/0:20,0:20:54.17:0,54,2069	1/1:2,21:23:42.14:1107,42,0	1/1:1,31:32:69.24:1812,69,0	0/0:20,0:20:60.21:0,60,2332	0/0:44,0:44:99:0,126,5008	0/0:30,0:30:90.31:0,90,3540	0/0:31,0:31:84.29:0,84,3228	0/0:17,0:17:48.16:0,48,1776	1/1:3,23:26:69.24:1668,69,0	1/1:0,24:23:60.21:1580,60,0	1/1:8,20:28:26.81:710,27,0	1/1:2,19:20:51.18:1343,51,0	1/1:2,27:29:57.20:1501,57,0	1/1:1,27:27:49.87:1341,50,0	0/0:18,0:18:54.19:0,54,2181	0/0:34,0:34:99:0,99,3652	1/1:1,18:19:45.15:1186,45,0	0/0:9,0:9:27.07:0,27,992
chr10	77915997	.	C	CAAAA	4235.73	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=0.388;DP=576;FS=2.958;HRun=8;HaplotypeScore=129.5716;InbreedingCoeff=0.9395;MQ=83.46;MQ0=0;MQRankSum=-5.201;QD=40.34;ReadPosRankSum=-2.095;VQSLOD=2.8188;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,102,1505	0/0:11,0:11:30.09:0,30,454	0/0:17,0:17:33.91:0,34,454	0/0:20,0:22:29.10:0,29,533	0/0:34,0:34:66.03:0,66,995	0/0:32,0:32:90.27:0,90,1341	0/0:16,0:16:39.12:0,39,589	0/0:22,0:22:48.09:0,48,683	0/0:22,0:22:57.18:0,57,860	0/0:24,0:24:63.20:0,63,953	0/1:15,0:15:0.13:0,0,336	1/1:3,12:16:33.11:762,33,0	1/1:6,17:23:48.16:1133,48,0	0/0:17,0:17:51.17:0,51,769	0/0:28,0:28:78.25:0,78,1179	0/0:18,0:18:51.16:0,51,751	0/0:17,0:17:48.16:0,48,726	0/0:12,0:12:36.12:0,36,545	0/0:14,0:15:30.03:0,30,432	0/0:25,0:25:41.97:0,42,617	0/0:15,0:15:39.12:0,39,583	1/1:8,16:26:56.28:1058,56,0	1/1:5,6:11:27.09:620,27,0	1/1:2,12:14:27.09:663,27,0	0/0:18,0:18:51.17:0,51,771	0/0:26,0:26:72.23:0,72,1072	0/0:26,0:25:69.20:0,69,1033	0/0:13,0:13:36.11:0,36,545
chr10	77916399	.	T	TCAGGTCCAGAG	1350.27	PASS	AB=0.750;AC=15;AF=0.938;AN=16;BaseQRankSum=-0.347;DP=38;FS=5.229;HRun=0;HaplotypeScore=21.5553;MQ=140.96;MQ0=0;MQRankSum=-0.347;QD=54.01;ReadPosRankSum=-0.520;VQSLOD=2.3279;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:6.01:75,6,0	./.	1/1:2,0:6:15.05:538,15,0	0/1:4,1:6:13.30:413,0,13	./.	./.	./.	./.	./.	1/1:2,0:2:6.02:155,6,0	./.	./.	./.	./.	./.	1/1:1,0:1:3:25,3,0	1/1:1,0:1:2.99:24,3,0	./.	./.	./.	./.	./.	./.	1/1:3,0:3:3.01:44,3,0	./.	1/1:3,0:3:6.02:152,6,0	./.	./.
chr10	77916484	.	A	AG	569.72	PASS	AB=0.905;AC=28;AF=0.583;AN=48;BaseQRankSum=1.893;DP=205;FS=2.960;HRun=1;HaplotypeScore=71.3723;InbreedingCoeff=-0.1087;MQ=26.34;MQ0=11;MQRankSum=-1.342;QD=3.41;ReadPosRankSum=0.037;VQSLOD=0.0390;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,1:4:0.17:1,0,0	./.	./.	./.	1/1:10,6:14:6.15:16,6,0	1/1:8,0:6:2.79:14,3,0	0/1:7,0:7:4.03:9,0,4	0/1:17,1:16:60.77:61,0,130	1/1:3,0:3:2.49:13,2,0	0/1:15,2:15:99:137,0,192	1/1:11,1:10:0.09:13,0,0	0/1:3,0:3:2.52:31,0,3	1/1:3,0:2:3.63:10,4,0	0/1:7,6:9:3.81:72,0,4	1/1:7,1:8:1.46:4,1,0	1/1:10,0:8:1.07:43,1,0	0/0:2,0:2:1.82:0,2,5	0/1:2,0:2:3.85:4,0,29	0/1:10,2:10:66.90:81,0,67	0/0:12,0:11:0.41:0,0,25	./.	0/0:10,0:9:3.90:0,4,13	0/0:6,1:6:4.69:0,5,20	0/0:5,1:5:0:0,0,0	1/1:4,1:5:4.49:14,4,0	0/1:10,3:13:86.09:86,0,119	0/1:5,0:5:26.73:77,0,27	0/1:6,0:2:4.79:5,0,31
chr10	77916838	.	G	GA	1611	PASS	AB=0.906;AC=35;AF=0.625;AN=56;BaseQRankSum=3.510;DP=389;FS=10.259;HRun=1;HaplotypeScore=127.5208;InbreedingCoeff=0.3469;MQ=27.45;MQ0=17;MQRankSum=0.665;QD=5.88;ReadPosRankSum=1.332;VQSLOD=-0.2790;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:17:5.85:0,6,115	1/1:4,3:7:6.26:95,6,0	0/0:31,0:5:9.02:0,9,95	0/0:29,0:3:9.03:0,9,106	1/1:14,8:22:6.22:67,6,0	1/1:18,6:20:12.79:69,13,0	1/1:11,2:12:0.56:2,1,0	0/0:8,0:5:6.02:0,6,74	0/0:8,1:8:0.36:0,0,1	1/1:10,12:21:20.45:595,20,0	1/1:13,4:18:8.36:111,8,0	0/1:4,0:4:0:0,0,0	1/1:7,3:10:3.92:67,4,0	1/1:7,3:10:0.05:4,0,0	0/1:8,0:6:0.01:1,0,0	1/1:7,0:6:1.54:4,2,0	0/0:3,1:3:1.36:0,1,3	0/1:9,1:7:32.57:33,0,144	0/0:9,0:7:14.95:0,15,135	0/1:12,3:14:8.97:9,0,23	0/1:7,0:7:0.95:5,0,1	0/1:12,8:17:4.71:54,0,5	1/1:12,1:12:8.81:45,9,0	1/1:5,1:6:2.47:11,2,0	1/1:14,6:17:11.19:34,11,0	1/1:9,10:19:16.29:487,16,0	0/1:13,2:14:25.44:25,0,137	1/1:4,0:4:8.41:45,8,0
chr10	77916869	.	AAG	A	1471.31	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=-1.286;DP=550;FS=0.000;HRun=0;HaplotypeScore=137.4737;InbreedingCoeff=0.5380;MQ=30.70;MQ0=37;MQRankSum=-0.738;QD=7.58;ReadPosRankSum=-2.023;VQSLOD=2.6096;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:20:33.90:0,34,515	0/0:8,0:8:16.92:0,17,213	0/0:80,0:12:20.78:0,21,179	0/0:109,0:15:30.06:0,30,388	0/0:18,0:19:12.01:0,12,194	1/1:13,9:20:14.53:282,15,0	1/1:9,3:12:16.53:156,17,0	1/1:11,10:17:34.25:427,34,0	1/1:7,3:10:12.47:150,12,0	0/0:25,0:24:56.51:0,57,768	0/0:22,0:23:36.12:0,36,590	0/0:4,0:4:2.94:0,3,18	0/0:8,0:8:4.38:0,4,22	0/0:11,0:11:8.76:0,9,147	1/1:9,4:11:17.43:195,17,0	1/1:6,2:7:5.98:57,6,0	1/1:1,7:8:13.26:166,13,0	0/1:6,0:5:8.25:8,0,11	0/1:10,0:7:9.98:10,0,17	0/1:12,0:11:7.57:8,0,13	1/1:13,0:13:3.93:34,4,0	0/0:14,0:12:5.14:0,5,14	0/1:13,0:13:0.21:0,0,0	0/1:8,0:8:0.13:0,0,0	1/1:16,3:16:6.81:109,7,0	0/0:24,0:24:56.68:0,57,633	0/1:19,0:17:12.74:54,0,13	0/0:2,0:1:3.01:0,3,43
chr10	77916880	.	A	AGAG	921.86	PASS	AB=0.933;AC=7;AF=0.125;AN=56;BaseQRankSum=6.597;DP=578;FS=19.985;HRun=0;HaplotypeScore=162.4257;InbreedingCoeff=0.5705;MQ=34.29;MQ0=27;MQRankSum=-5.287;QD=18.08;ReadPosRankSum=1.377;VQSLOD=1.7737;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:21:36.46:0,36,618	0/0:8,0:8:18.31:0,18,219	0/0:73,0:13:29.96:0,30,353	0/0:127,0:16:31.71:0,32,453	0/0:19,0:19:11.93:0,12,200	0/0:22,0:20:32.58:0,33,279	0/0:12,0:12:22.12:0,22,201	0/0:23,0:20:39.86:0,40,331	0/0:13,0:13:16.40:0,16,138	0/0:25,0:24:57.81:0,58,966	0/0:21,0:21:36.08:0,36,599	0/0:4,0:4:3.01:0,3,38	0/0:9,0:9:11.61:0,12,79	0/0:11,0:11:10.39:0,10,153	0/0:15,0:13:26.82:0,27,236	0/0:8,0:7:3.46:0,3,25	0/0:9,0:9:10.89:0,11,128	0/0:8,0:6:14.84:0,15,133	1/1:4,1:4:5.53:105,6,0	0/1:13,1:12:19.13:81,0,19	1/1:8,3:12:19.06:224,19,0	0/0:14,0:11:6.94:0,7,60	0/0:15,0:15:3.01:0,3,38	0/0:10,0:10:0:0,0,1	0/0:20,0:18:22.30:0,22,215	0/0:30,0:29:77.07:0,77,992	1/1:17,1:17:33.33:649,33,0	0/0:2,0:1:3.01:0,3,50
chr10	77916882	.	AGAGGGAGAGGAAG	A	1868.67	PASS	AB=0.987;AC=13;AF=0.232;AN=56;BaseQRankSum=8.933;DP=566;FS=32.081;HRun=0;HaplotypeScore=183.5006;InbreedingCoeff=0.3937;MQ=34.72;MQ0=27;MQRankSum=-6.741;QD=13.07;ReadPosRankSum=1.877;VQSLOD=0.9889;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:22:12.32:0,12,2016	0/0:8,0:8:15.58:0,16,590	0/0:70,0:13:36.03:0,36,571	0/0:126,0:14:14.64:0,15,854	0/0:17,0:17:11.87:0,12,361	0/1:21,0:19:8.78:9,0,521	0/0:12,0:12:24.07:0,24,897	0/0:20,0:19:39.98:0,40,1056	0/0:11,0:11:21.05:0,21,765	0/0:25,0:24:6.70:0,7,2568	0/0:21,0:21:35.96:0,36,1518	0/0:5,0:5:9.03:0,9,233	0/0:9,0:9:16.70:0,17,477	0/0:11,0:11:11.83:0,12,498	0/0:14,0:13:26.96:0,27,1032	0/0:8,0:7:9.03:0,9,256	0/0:9,0:9:13.97:0,14,720	0/0:9,0:7:16.15:0,16,360	1/1:3,0:2:6.02:116,6,0	0/1:13,1:12:27.45:122,0,27	1/1:11,0:12:28.92:568,29,0	0/1:14,0:11:0.01:0,0,129	0/0:13,0:13:8.90:0,9,301	1/1:9,0:9:3.27:10,3,0	0/1:19,0:17:12.96:13,0,872	0/1:31,0:30:34.63:35,0,2276	1/1:9,7:17:35.99:1152,36,0	0/0:2,0:1:3.01:0,3,178
chr10	77916889	.	GAGGA	G	773.92	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=9.679;DP=509;FS=25.927;HRun=0;HaplotypeScore=125.4750;InbreedingCoeff=0.3372;MQ=36.37;MQ0=30;MQRankSum=-7.086;QD=6.34;ReadPosRankSum=0.009;VQSLOD=0.8574;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:20:22.15:22,0,919	0/0:7,0:7:12.03:0,12,246	0/0:65,0:11:15.14:0,15,235	0/0:124,0:13:2.55:0,3,488	0/0:10,0:10:9:0,9,85	0/0:17,0:16:20.25:0,20,380	0/0:10,0:10:30.06:0,30,638	0/0:20,0:19:36.12:0,36,889	0/0:7,0:7:21.07:0,21,459	0/0:21,0:20:38.72:0,39,1132	0/0:19,0:19:39.13:0,39,784	0/0:4,0:4:9.03:0,9,187	0/0:9,0:9:18.04:0,18,306	0/1:8,0:8:1.56:2,0,211	0/0:13,0:13:28.56:0,29,733	0/0:8,0:7:11.93:0,12,242	0/0:12,0:11:24.08:0,24,517	0/1:9,0:7:11.13:11,0,174	1/1:3,1:2:5.81:69,6,0	1/1:9,0:7:0.66:25,1,0	1/1:11,1:12:23.11:290,23,0	0/1:10,0:9:22.63:23,0,70	0/0:8,0:8:9.03:0,9,214	0/1:8,0:9:9.14:30,0,9	0/1:19,0:18:6.29:6,0,648	0/0:27,0:26:42.01:0,42,1344	1/1:15,2:15:38.58:455,39,0	0/0:4,0:3:9.03:0,9,241
chr10	77916891	.	GGA	G	337.78	PASS	AB=0.952;AC=12;AF=0.214;AN=56;BaseQRankSum=9.091;DP=477;FS=29.725;HRun=0;HaplotypeScore=102.2267;InbreedingCoeff=0.1746;MQ=37.17;MQ0=31;MQRankSum=-6.699;QD=2.07;ReadPosRankSum=2.546;VQSLOD=0.4089;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:21:31.35:0,31,840	0/0:5,0:5:12.04:0,12,242	0/1:66,1:10:20.23:20,0,210	0/0:119,0:13:17.44:0,17,443	0/0:6,3:9:9.03:0,9,176	0/1:14,1:13:24.58:25,0,272	0/0:11,0:11:30.09:0,30,501	0/0:19,0:18:39.09:0,39,743	0/0:7,0:7:21.07:0,21,382	0/0:17,0:17:47.05:0,47,948	0/0:15,3:18:42.14:0,42,805	0/0:4,0:4:9.03:0,9,160	0/0:9,0:9:18.06:0,18,315	0/0:6,0:6:12.04:0,12,233	0/0:11,0:11:30.10:0,30,570	0/0:8,0:7:11.99:0,12,200	0/0:11,0:10:24.08:0,24,393	0/1:6,1:7:18.06:18,0,153	0/1:3,0:3:9.95:33,0,10	0/1:7,0:5:12.71:29,0,13	1/1:12,0:12:21.21:109,21,0	0/1:6,0:7:29.82:30,0,53	0/0:8,0:8:9.03:0,9,177	0/1:9,0:9:0.25:0,0,28	0/1:13,2:17:3.58:4,0,523	0/0:22,0:21:60.21:0,60,1165	1/1:16,1:16:13.55:223,14,0	0/0:4,0:3:9.03:0,9,183
chr10	77916893	.	AAG	A	165.75	PASS	AB=0.970;AC=8;AF=0.143;AN=56;BaseQRankSum=8.324;DP=490;FS=14.489;HRun=0;HaplotypeScore=105.0965;InbreedingCoeff=0.2640;MQ=37.83;MQ0=31;MQRankSum=-6.249;QD=0.72;ReadPosRankSum=3.269;VQSLOD=1.0788;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:24.20:0,24,814	0/0:5,1:6:15.05:0,15,270	0/1:67,0:10:2.13:2,0,222	0/1:112,0:13:3.83:4,0,372	0/0:8,0:8:8.99:0,9,106	0/0:15,0:13:15.84:0,16,348	0/0:13,0:13:33.04:0,33,586	0/0:18,0:17:39.13:0,39,757	0/0:8,0:8:21.07:0,21,423	0/0:16,1:17:31.03:0,31,850	0/0:19,0:19:42.06:0,42,747	0/0:3,0:3:9.03:0,9,158	0/0:8,0:8:17.97:0,18,244	0/0:6,0:6:14.96:0,15,202	0/0:14,0:14:33.11:0,33,666	0/0:10,0:9:20.99:0,21,317	0/0:13,0:11:24.08:0,24,481	0/1:9,0:8:1.74:2,0,180	0/1:4,0:3:5.64:6,0,14	0/1:6,1:5:10.28:27,0,10	1/1:5,6:11:20.10:141,20,0	0/0:12,0:11:8.15:0,8,122	0/0:8,0:8:15.05:0,15,242	0/0:8,1:10:2.31:0,2,28	0/0:18,0:18:29.05:0,29,565	0/0:24,1:24:66.21:0,66,1236	0/1:15,1:16:1.21:105,0,1	0/0:4,0:3:9.03:0,9,179
chr10	77916902	.	GGA	G	3609.45	PASS	AB=0.901;AC=36;AF=0.643;AN=56;BaseQRankSum=5.311;DP=536;FS=6.638;HRun=0;HaplotypeScore=99.6162;InbreedingCoeff=0.5276;MQ=38.04;MQ0=34;MQRankSum=-1.888;QD=9.89;ReadPosRankSum=0.811;VQSLOD=2.7949;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:23:54.18:0,54,797	1/1:5,1:7:11.86:113,12,0	0/0:64,0:6:2.99:0,3,23	0/1:115,1:11:2.90:3,0,39	1/1:7,2:9:2.94:37,3,0	0/1:18,1:16:18.92:19,0,162	0/0:15,0:15:29.56:0,30,492	0/0:22,0:19:33.11:0,33,517	0/1:7,1:8:15.86:16,0,259	1/1:13,9:22:18.14:442,18,0	1/1:15,6:21:26.86:295,27,0	1/1:4,2:6:11.70:110,12,0	1/1:6,4:11:20.90:232,21,0	1/1:7,2:9:17.31:152,17,0	0/1:13,1:14:3.82:4,0,440	0/0:11,0:10:4.19:0,4,299	0/0:13,0:10:21.07:0,21,329	1/1:3,5:7:11.99:156,12,0	0/1:6,1:5:3.34:79,0,3	1/1:9,0:8:9.19:69,9,0	1/1:10,0:11:1.58:102,2,0	1/1:6,8:13:17.80:180,18,0	1/1:9,5:14:30:326,30,0	0/1:7,3:10:0.11:0,0,0	0/0:19,0:18:27.07:0,27,390	1/1:13,16:28:72.21:868,72,0	1/1:18,0:17:23.30:295,23,0	1/1:0,3:3:9.03:111,9,0
chr10	77916960	.	GGA	G	7786.79	PASS	AB=0.796;AC=34;AF=0.607;AN=56;BaseQRankSum=8.194;DP=718;FS=0.373;HRun=0;HaplotypeScore=102.6179;InbreedingCoeff=0.8014;MQ=42.93;MQ0=38;MQRankSum=-0.661;QD=24.56;ReadPosRankSum=3.065;VQSLOD=5.8190;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:52.98:0,53,1363	1/1:3,7:10:18.06:225,18,0	0/0:93,0:12:13.23:0,13,170	0/0:127,0:14:31.15:0,31,315	1/1:2,5:8:23.86:259,24,0	0/1:26,1:27:14.86:15,0,785	0/0:22,2:24:45.15:0,45,713	0/0:35,0:34:31.23:0,31,947	0/0:19,1:20:10.70:0,11,674	1/1:10,16:26:63.19:777,63,0	1/1:6,7:13:21.07:262,21,0	1/1:2,9:11:27.09:337,27,0	1/1:2,14:17:47.89:573,48,0	1/1:6,14:20:50.94:584,51,0	0/0:14,1:15:1.70:0,2,518	0/0:15,0:15:39.13:0,39,615	0/0:13,0:13:27.09:0,27,439	1/1:6,7:13:30.07:372,30,0	1/1:7,9:16:36.11:440,36,0	1/1:10,10:19:35.84:431,36,0	1/1:6,19:25:63.19:773,63,0	1/1:4,13:17:45.08:531,45,0	1/1:5,8:13:24.08:300,24,0	1/1:5,14:19:26.92:438,27,0	0/0:18,1:19:13.64:0,14,713	1/1:12,19:31:72.05:864,72,0	0/1:9,13:22:12.25:493,0,12	1/1:1,6:7:9.03:113,9,0
chr10	77917157	.	GAC	G	5380.48	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.714;DP=801;FS=0.000;HRun=0;HaplotypeScore=132.6008;InbreedingCoeff=0.9972;MQ=72.33;MQ0=2;MQRankSum=0.295;QD=37.89;ReadPosRankSum=4.444;VQSLOD=6.6984;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,147,2687	0/0:7,0:7:21.07:0,21,404	0/0:30,0:29:86.29:0,86,1520	0/0:43,0:40:76.27:0,76,1550	0/0:20,0:20:51.17:0,51,981	0/0:32,0:32:93.32:0,93,1755	0/0:28,0:28:80.87:0,81,1461	0/0:43,0:43:99:0,129,2309	0/0:38,0:38:94.26:0,94,2082	0/0:43,0:43:99:0,123,2312	0/0:21,0:21:60.19:0,60,1114	1/1:0,32:32:78.21:1193,78,0	1/1:4,23:27:66.17:982,66,0	0/0:31,1:32:47.41:0,47,1639	0/0:26,0:26:78.25:0,78,1449	0/0:37,0:37:99:0,111,2040	0/0:20,0:20:60.17:0,60,1093	0/0:24,0:24:44.06:0,44,1192	0/0:18,0:18:48.10:0,48,834	0/0:17,0:17:48.16:0,48,922	0/0:28,0:28:69.24:0,69,1318	1/1:0,20:19:51.17:778,51,0	1/1:0,24:24:60.20:914,60,0	1/1:1,38:39:99:1513,99,0	0/0:22,0:22:63.22:0,63,1191	0/0:35,0:35:99:0,99,1812	0/0:39,0:38:87.30:0,87,1649	0/0:7,0:7:18.02:0,18,278
chr10	77917194	.	GGGGAGAGACAGA	G	3439.63	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.816;DP=811;FS=12.212;HRun=0;HaplotypeScore=278.9785;InbreedingCoeff=0.9844;MQ=64.20;MQ0=1;MQRankSum=-5.587;QD=33.72;ReadPosRankSum=0.538;VQSLOD=1.1583;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:93.32:0,93,4739	0/0:9,0:9:21.07:0,21,1028	0/0:32,0:27:54.07:0,54,1768	0/0:47,0:36:45.87:0,46,1730	0/0:17,0:17:24.08:0,24,978	0/0:31,0:31:75.26:0,75,3883	0/0:31,0:31:87.30:0,87,4273	0/0:43,0:42:93.31:0,93,3801	0/0:41,0:41:99:0,111,5639	0/0:36,0:36:75.26:0,75,3739	0/0:22,0:22:51.18:0,51,2439	0/0:34,0:34:77.11:0,77,3778	0/0:24,0:24:39.03:0,39,2013	0/0:39,0:39:96.33:0,96,5198	0/0:25,0:25:54.17:0,54,2652	0/0:40,0:40:99:0,111,5244	0/0:24,0:24:62.95:0,63,2937	0/0:25,0:25:65.33:0,65,3083	1/1:11,14:24:42.03:1005,42,0	1/1:6,11:17:11.95:134,12,0	1/1:20,1:21:24:388,24,0	0/0:24,0:23:39.13:0,39,1896	0/0:18,0:18:18.06:0,18,862	0/0:39,0:39:90.29:0,90,4094	0/0:19,0:19:48.16:0,48,2390	0/0:36,0:36:93.32:0,93,4899	1/1:9,30:39:54:1913,54,0	0/0:7,0:7:18.06:0,18,1076
chr10	77918754	.	C	CTGTTTA	6274.44	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=14.402;DP=388;FS=25.511;HRun=0;HaplotypeScore=137.7328;InbreedingCoeff=0.8314;MQ=86.59;MQ0=0;MQRankSum=-12.651;QD=45.47;ReadPosRankSum=4.013;VQSLOD=3.1792;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.25:0,90,2150	1/1:6,0:6:16.27:251,16,0	0/0:15,0:15:40.87:0,41,830	0/0:20,0:20:56.85:0,57,1064	1/1:10,0:10:23.90:329,24,0	0/0:19,0:19:54.10:0,54,1228	0/0:20,0:20:60.19:0,60,1369	0/0:43,0:43:99:0,129,3139	0/0:23,0:23:69.22:0,69,1663	1/1:3,0:3:6.02:119,6,0	1/1:5,0:5:12.93:228,13,0	1/1:11,0:11:1.09:439,1,0	1/1:12,0:12:7.09:417,7,0	1/1:12,0:12:33.11:636,33,0	0/0:19,0:19:57.14:0,57,1284	0/0:15,0:15:45.13:0,45,1046	0/0:31,0:31:93.05:0,93,2172	1/1:12,0:12:30.07:484,30,0	1/1:5,1:6:18.06:437,18,0	1/1:7,3:10:30.10:787,30,0	1/1:5,1:6:12.04:336,12,0	1/1:2,0:2:6.02:113,6,0	1/1:10,0:10:10.09:369,10,0	1/1:11,0:11:27.03:445,27,0	0/0:13,0:13:39.13:0,39,990	0/1:10,0:10:38.97:220,0,39	1/1:4,3:7:17.80:445,18,0	1/1:5,0:5:12.04:220,12,0
chr10	77918756	.	G	GTTTACGTCCTTAGAAA	30988.46	PASS	AB=0.750;AC=33;AF=0.589;AN=56;BaseQRankSum=1.176;DP=451;FS=23.882;HRun=0;HaplotypeScore=180.0300;InbreedingCoeff=0.9422;MQ=82.04;MQ0=0;MQRankSum=-14.193;QD=154.94;ReadPosRankSum=1.774;VQSLOD=3.5418;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.32:0,93,3737	1/1:4,4:9:27.06:1568,27,0	0/0:16,0:16:21.13:0,21,1394	0/0:20,0:20:44.42:0,44,1756	1/1:6,5:12:33.11:1836,33,0	0/0:19,0:19:51.17:0,51,2134	0/0:18,0:18:54.18:0,54,2307	0/0:44,0:44:99:0,129,4589	0/0:23,0:23:63.22:0,63,2929	1/1:7,2:10:21.07:1304,21,0	1/1:5,3:10:27.05:1425,27,0	1/1:6,6:17:36.12:2710,36,0	1/1:5,6:14:33.11:2249,33,0	1/1:6,8:15:42.14:3198,42,0	0/0:20,0:20:54.17:0,54,2148	0/0:14,0:14:42.14:0,42,1824	0/0:31,0:31:87.28:0,87,3910	1/1:13,3:18:42.14:2655,42,0	1/1:11,0:12:36.09:1956,36,0	1/1:10,0:13:36.12:2073,36,0	1/1:8,0:9:21.03:971,21,0	1/1:6,0:6:15.04:973,15,0	1/1:5,6:12:27.09:1833,27,0	1/1:10,3:15:33.11:2123,33,0	0/0:13,0:13:39.13:0,39,1696	1/1:7,4:14:33.03:1958,33,0	0/1:5,0:9:2.88:1306,0,3	1/1:1,3:5:12.04:850,12,0
chr10	77918960	.	G	GAGCT	34387.12	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.628;DP=552;FS=2.688;HRun=0;HaplotypeScore=113.3290;InbreedingCoeff=0.9736;MQ=85.32;MQ0=0;MQRankSum=-10.631;QD=73.79;ReadPosRankSum=4.490;VQSLOD=6.6753;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,2414	1/1:3,12:16:45.15:1296,45,0	0/0:30,0:30:84.06:0,84,1570	0/0:15,0:15:39.06:0,39,666	1/1:2,24:27:60.21:1719,60,0	1/1:3,17:22:54.19:1563,54,0	1/1:4,10:14:42.14:1179,42,0	1/1:6,17:24:69.23:1877,69,0	1/1:6,22:29:75.26:2133,75,0	1/1:2,16:19:60.20:1610,60,0	1/1:0,11:11:30.10:863,30,0	1/1:5,13:19:36.12:1041,36,0	1/1:2,14:17:45.11:1233,45,0	1/1:2,14:16:45.15:1301,45,0	1/1:1,12:14:36.12:1042,36,0	1/1:1,19:20:48.16:1386,48,0	1/1:2,17:20:45.15:1303,45,0	1/1:1,18:22:57.20:1646,57,0	1/1:4,10:16:48.08:1175,48,0	1/1:3,12:16:39.09:1057,39,0	1/1:4,5:9:9.03:257,9,0	1/1:2,13:15:39.13:1124,39,0	1/1:1,22:25:69.24:1974,69,0	1/1:1,32:35:96.33:2780,96,0	1/1:0,20:20:60.21:1733,60,0	1/1:5,17:22:66.20:1803,66,0	1/1:1,5:7:15.05:433,15,0	1/1:2,8:10:30.10:858,30,0
chr10	77919161	.	TGGAA	T	3561.08	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.519;DP=704;FS=1.558;HRun=0;HaplotypeScore=119.6510;InbreedingCoeff=1.0000;MQ=86.68;MQ0=0;MQRankSum=-4.506;QD=45.65;ReadPosRankSum=1.482;VQSLOD=3.9168;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,3850	0/0:15,0:15:45.15:0,45,1163	0/0:30,0:30:81.25:0,81,2035	0/0:22,0:22:60.21:0,60,1521	0/0:34,0:34:99:0,102,2686	0/0:26,0:26:78.27:0,78,2061	0/0:26,0:26:75.26:0,75,1902	0/0:33,0:33:90.31:0,90,2389	0/0:30,0:30:87.28:0,87,2243	0/0:30,0:30:90.31:0,90,2386	0/0:17,0:17:42.14:0,42,1123	0/0:24,0:24:72.23:0,72,1881	0/0:20,0:20:57.20:0,57,1537	0/0:25,0:25:72.24:0,72,1841	0/0:28,0:28:78.27:0,78,2097	0/0:27,0:27:78.25:0,78,2051	0/0:19,0:19:54.19:0,54,1420	0/0:37,0:37:99:0,105,2724	1/1:1,18:19:54.18:1006,54,0	1/1:3,16:19:45.11:725,45,0	1/1:1,23:24:57.15:1045,57,0	0/0:26,0:26:72.25:0,72,1909	0/0:22,0:22:63.22:0,63,1700	0/0:22,0:21:66.23:0,66,1736	0/0:21,0:21:63.22:0,63,1638	0/0:24,0:24:69.24:0,69,1834	1/1:0,16:16:42.14:784,42,0	0/0:20,0:20:54.17:0,54,1401
chr10	77919725	.	C	CTG	5381.25	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-13.528;DP=755;FS=2.353;HRun=0;HaplotypeScore=86.2340;InbreedingCoeff=0.9993;MQ=84.00;MQ0=0;MQRankSum=-2.711;QD=48.05;ReadPosRankSum=0.951;VQSLOD=5.8098;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,160,2410	0/0:8,0:8:24.07:0,24,348	0/0:22,0:22:63.15:0,63,869	0/0:22,0:22:60.20:0,60,882	0/0:27,0:27:78.21:0,78,1127	0/0:27,0:27:78.26:0,78,1194	0/0:31,0:31:93.32:0,93,1422	0/0:43,0:43:99:0,129,1957	0/0:35,0:35:99:0,102,1539	0/0:20,0:20:57.19:0,57,872	0/0:15,0:15:45.15:0,45,688	0/0:24,0:24:66.22:0,66,1008	0/0:23,0:23:69.22:0,69,1027	0/0:33,0:33:93.30:0,93,1403	0/0:37,0:37:99:0,111,1699	0/0:15,0:15:42.14:0,42,643	0/0:37,0:37:99:0,111,1700	0/0:34,0:34:99:0,102,1536	1/1:2,12:14:39.12:693,39,0	1/1:0,32:32:81.28:1565,81,0	1/1:4,47:52:99:2492,129,0	0/0:26,0:26:75.25:0,75,1148	0/0:19,0:19:54.18:0,54,827	0/0:31,0:31:90.30:0,90,1368	0/0:19,0:19:57.19:0,57,873	0/0:23,0:23:66.22:0,66,1011	1/1:2,12:14:33.11:631,33,0	0/0:16,0:16:48.16:0,48,735
chr10	77922177	.	G	GAA	5305.38	PASS	AB=0.792;AC=24;AF=0.429;AN=56;BaseQRankSum=-2.973;DP=612;FS=5.266;HRun=12;HaplotypeScore=97.1889;InbreedingCoeff=0.8198;MQ=74.08;MQ0=0;MQRankSum=-2.859;QD=17.39;ReadPosRankSum=-1.239;VQSLOD=3.8775;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:40:85.60:0,86,823	0/0:7,0:8:17.71:0,18,151	0/1:21,0:15:0.46:0,0,92	0/0:17,0:16:20.59:0,21,146	0/0:24,0:24:53.93:0,54,500	1/1:6,15:24:38.61:487,39,0	1/1:4,13:18:41.63:556,42,0	1/1:11,14:29:30.79:617,31,0	1/1:4,9:18:1.28:240,1,0	0/0:19,0:21:35.40:0,35,301	0/0:13,0:18:1.06:0,1,241	0/0:10,0:28:38.82:0,39,167	0/0:1,0:30:74.36:0,74,336	0/0:15,0:17:17.71:0,18,260	1/1:7,22:32:45.14:605,45,0	0/1:6,14:21:19.46:363,0,19	1/1:5,17:26:48.62:652,49,0	0/0:6,0:14:19.70:0,20,115	1/1:19,0:19:29.98:258,30,0	1/1:27,0:28:41.99:369,42,0	1/1:13,0:13:27.45:231,27,0	0/0:2,0:13:24.05:0,24,121	0/0:3,0:20:41.10:0,41,178	0/0:3,0:17:38.40:0,38,166	1/1:2,12:18:35.08:407,35,0	0/0:23,0:26:41.53:0,42,420	1/1:37,0:37:60.44:522,60,0	0/0:9,0:12:17.50:0,17,244
chr10	77922187	.	A	AAAAC	4652.95	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=3.652;DP=617;FS=2.649;HRun=0;HaplotypeScore=131.2831;InbreedingCoeff=0.5083;MQ=74.36;MQ0=0;MQRankSum=-5.123;QD=16.10;ReadPosRankSum=-0.825;VQSLOD=4.6649;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,102,1528	0/0:11,0:11:30.02:0,30,377	0/0:21,0:14:26.46:0,26,301	0/0:22,0:19:35.07:0,35,425	0/0:26,0:26:66.12:0,66,984	1/1:20,0:20:7.04:45,7,0	1/1:14,0:14:5:21,5,0	0/1:31,0:31:24.03:24,0,245	0/1:17,0:17:20.98:21,0,58	0/0:19,0:19:51.10:0,51,695	0/0:21,0:21:28.10:0,28,556	0/0:20,0:20:42.58:0,43,457	0/0:32,0:32:87.22:0,87,947	0/0:13,0:13:38.79:0,39,544	0/1:31,0:31:13.54:68,0,14	0/1:19,0:19:9.41:9,0,79	0/1:24,0:24:4.39:27,0,4	0/0:13,0:13:27.04:0,27,309	1/1:6,13:24:72.09:1276,72,0	1/1:5,16:30:54.04:1118,54,0	1/1:3,8:17:27.09:593,27,0	0/0:12,0:12:29.48:0,29,317	0/0:20,0:20:48.11:0,48,514	0/0:16,0:16:48.11:0,48,508	0/1:23,0:23:15.40:15,0,101	0/0:28,0:28:71.96:0,72,968	1/1:5,29:39:67.68:1435,68,0	0/0:15,0:15:35.78:0,36,500
chr10	77922510	.	T	TCTC	5864.15	PASS	AB=0.808;AC=16;AF=0.286;AN=56;BaseQRankSum=-12.320;DP=604;FS=1.929;HRun=0;HaplotypeScore=90.5215;InbreedingCoeff=0.8649;MQ=66.55;MQ0=6;MQRankSum=2.059;QD=27.66;ReadPosRankSum=0.744;VQSLOD=4.4394;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:70.85:0,71,1024	0/0:9,0:9:18.06:0,18,253	0/1:25,0:11:3.68:4,0,148	0/0:26,0:22:18.24:0,18,219	0/0:20,0:20:51.14:0,51,695	1/1:4,25:29:63.22:1263,63,0	1/1:8,11:19:30.10:602,30,0	1/1:18,8:28:31.02:504,31,0	0/1:9,15:24:0.02:725,0,0	0/0:20,0:20:54.17:0,54,734	0/0:18,0:18:54.16:0,54,741	0/0:20,0:20:51.17:0,51,717	0/0:20,0:20:42.14:0,42,590	0/0:23,0:23:42.11:0,42,567	1/1:5,15:20:33.11:661,33,0	1/1:4,15:19:33.11:662,33,0	1/1:10,11:23:27.09:541,27,0	0/0:20,0:20:57.12:0,57,748	0/0:8,0:28:38.67:0,39,272	0/0:4,0:18:41.66:0,42,293	0/0:2,0:7:2.98:0,3,21	0/0:9,0:9:24.08:0,24,337	0/0:29,0:29:57.19:0,57,801	0/0:21,0:21:36.08:0,36,484	1/1:6,19:25:45.15:903,45,0	0/0:31,0:31:75.25:0,75,1049	0/0:6,0:21:32.73:0,33,230	0/0:11,0:11:27.09:0,27,379
chr10	77922858	.	TGG	T	1795.16	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-1.971;DP=551;FS=1.106;HRun=10;HaplotypeScore=76.6547;InbreedingCoeff=0.9201;MQ=53.54;MQ0=12;MQRankSum=-0.481;QD=24.93;ReadPosRankSum=1.198;VQSLOD=3.5957;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:44:93.65:0,94,1205	0/0:8,0:10:21.44:0,21,296	0/0:18,0:8:24.06:0,24,355	0/0:13,0:2:6.02:0,6,79	0/0:18,0:20:46.61:0,47,624	0/0:15,0:23:26.66:0,27,347	0/0:9,0:17:24.04:0,24,245	0/0:11,0:15:21.06:0,21,259	0/0:10,0:14:9.03:0,9,123	0/0:14,0:14:23.05:0,23,302	0/0:12,0:13:35.58:0,36,487	0/0:16,0:16:36.07:0,36,366	0/0:22,0:22:57.12:0,57,612	0/0:27,0:27:59.61:0,60,857	0/0:9,0:17:24.05:0,24,274	0/0:9,0:18:32.54:0,33,345	0/0:19,0:35:32.16:0,32,370	0/0:21,0:24:37.59:0,38,502	1/1:0,12:11:33.07:357,33,0	1/1:3,13:16:39.10:433,39,0	1/1:3,13:16:45.12:501,45,0	0/0:15,0:15:39.09:0,39,417	0/0:25,0:25:66.16:0,66,715	0/0:34,0:34:90.02:0,90,897	0/0:10,0:12:5.60:0,6,63	0/0:13,0:15:28:0,28,269	1/1:3,25:28:60.08:663,60,0	0/0:9,0:8:18.04:0,18,253
chr10	77923496	.	A	AT	4892.18	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-12.531;DP=703;FS=11.255;HRun=9;HaplotypeScore=65.8267;InbreedingCoeff=0.9562;MQ=68.77;MQ0=0;MQRankSum=-0.578;QD=27.03;ReadPosRankSum=-0.855;VQSLOD=4.3940;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:61.43:0,61,680	1/1:4,8:12:24.06:266,24,0	0/0:6,0:6:8.98:0,9,78	0/0:14,0:14:29.96:0,30,258	1/1:3,29:32:64.19:936,64,0	0/0:19,0:19:47.98:0,48,417	0/0:23,0:23:53.10:0,53,463	0/0:24,0:24:53.98:0,54,466	0/0:30,0:30:71.95:0,72,625	1/1:7,24:31:75.20:827,75,0	1/1:5,23:29:46.10:724,46,0	0/0:30,0:30:77.97:0,78,677	0/0:25,0:25:62.96:0,63,543	1/1:2,17:19:48.13:531,48,0	0/0:41,0:42:99:0,113,962	0/0:33,0:33:77.95:0,78,677	0/0:25,0:25:65.97:0,66,569	0/0:20,0:21:50:0,50,423	0/0:24,2:26:2.64:0,3,476	0/0:26,0:26:62.96:0,63,547	0/0:29,0:29:74.95:0,75,647	0/0:25,0:25:65.98:0,66,573	0/0:28,0:28:65.97:0,66,573	0/0:17,0:17:41.97:0,42,365	0/0:22,0:22:41.95:0,42,365	1/1:3,28:31:38.14:877,38,0	0/0:26,0:25:68.98:0,69,599	1/1:3,23:27:42.17:731,42,0
chr10	77923767	.	TC	T	11203.67	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-3.144;DP=625;FS=3.951;HRun=6;HaplotypeScore=74.9948;InbreedingCoeff=0.9679;MQ=79.53;MQ0=13;MQRankSum=-2.481;QD=24.62;ReadPosRankSum=6.773;VQSLOD=4.3189;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.10:0,60,674	1/1:1,10:11:30.08:320,30,0	0/0:72,0:33:38.71:0,39,476	0/0:74,1:25:28.20:0,28,273	1/1:4,17:21:51.01:517,51,0	1/1:1,18:19:39.10:416,39,0	1/1:1,14:15:45.09:471,45,0	1/1:6,35:42:99:1065,105,0	1/1:0,21:21:54.14:576,54,0	1/1:0,20:20:60.13:629,60,0	1/1:0,11:11:30.03:308,30,0	1/1:1,13:14:30.06:321,30,0	1/1:2,20:22:51.02:529,51,0	1/1:2,16:18:39.10:417,39,0	1/1:2,20:22:48.11:513,48,0	1/1:2,11:13:24.05:257,24,0	1/1:0,29:29:72.13:756,72,0	1/1:1,6:7:18.05:192,18,0	1/1:2,22:24:60.05:579,60,0	1/1:2,10:12:21.15:281,21,0	1/1:2,10:12:18.04:192,18,0	1/1:0,15:15:42:422,42,0	1/1:2,18:20:36.08:380,36,0	1/1:0,13:13:30.08:320,30,0	1/1:0,16:16:42.10:443,42,0	1/1:2,22:24:65.94:678,66,0	1/1:1,17:18:36.08:384,36,0	1/1:5,11:16:8.35:237,8,0
chr10	77924096	.	TG	T	2696.15	PASS	AB=0.940;AC=29;AF=0.518;AN=56;BaseQRankSum=6.386;DP=460;FS=9.677;HRun=10;HaplotypeScore=103.6402;InbreedingCoeff=0.7010;MQ=83.62;MQ0=6;MQRankSum=-1.727;QD=10.25;ReadPosRankSum=3.474;VQSLOD=2.0838;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,2:22:16.06:0,16,404	1/1:0,5:5:11.99:104,12,0	0/1:32,2:19:33.67:34,0,100	0/1:32,2:25:37.09:37,0,245	1/1:5,5:10:7.45:55,7,0	0/0:10,0:14:8.68:0,9,55	0/0:18,1:28:12.04:0,12,250	0/1:12,1:20:5.51:6,0,114	0/0:17,0:18:20.31:0,20,148	1/1:7,9:16:30.40:252,30,0	1/1:4,5:9:11.75:77,12,0	1/1:5,15:20:38.44:308,38,0	1/1:2,9:11:28.83:226,29,0	1/1:3,12:15:35.79:298,36,0	0/0:5,0:8:2.84:0,3,14	0/0:10,0:15:12.44:0,12,66	0/0:13,0:19:23.48:0,23,168	1/1:4,11:15:32.67:271,33,0	0/0:11,0:11:16.08:0,16,77	0/0:17,0:17:8.41:0,8,97	0/0:20,0:20:29.75:0,30,154	1/1:5,6:11:14.65:95,15,0	1/1:2,12:14:32.70:258,33,0	1/1:4,13:17:21.31:156,21,0	0/0:9,0:12:11.41:0,11,87	1/1:1,20:21:59.98:518,60,0	0/0:13,0:13:4.78:0,5,160	1/1:1,8:9:26.03:213,26,0
chr10	77924110	.	GCA	G	966.98	PASS	AB=0.858;AC=26;AF=0.500;AN=52;BaseQRankSum=2.509;DP=432;FS=0.000;HRun=0;HaplotypeScore=116.8791;InbreedingCoeff=0.2297;MQ=56.49;MQ0=15;MQRankSum=-2.213;QD=3.91;ReadPosRankSum=2.460;VQSLOD=2.3346;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,6:23:17.64:177,18,0	1/1:7,1:9:7.35:46,7,0	./.	./.	0/1:5,1:8:24.26:24,0,39	0/0:5,0:4:6.02:0,6,87	0/1:25,4:30:74.10:74,0,200	0/1:19,0:19:21.18:21,0,77	0/1:11,0:12:15.24:15,0,201	1/1:11,2:15:12.66:96,13,0	1/1:4,2:5:3.01:31,3,0	0/0:17,0:24:36.01:0,36,343	0/0:10,0:14:17.99:0,18,154	1/1:12,4:15:20.89:192,21,0	0/0:8,0:8:9.03:0,9,133	0/0:14,0:14:15.05:0,15,223	0/1:12,2:14:47.41:47,0,161	0/0:14,0:16:14.98:0,15,131	1/1:9,0:9:2.84:14,3,0	1/1:9,0:13:5.51:28,6,0	1/1:14,1:14:5.91:48,6,0	0/0:6,0:7:6:0,6,52	0/0:14,0:15:15.03:0,15,170	0/0:19,0:23:8.32:0,8,79	0/1:7,1:8:23.71:24,0,78	0/1:18,4:23:18.75:182,0,19	1/1:10,0:14:11.36:56,11,0	0/1:8,2:11:11.05:67,0,11
chr10	77925354	.	CT	C	3974.45	PASS	AB=0.522;AC=39;AF=0.696;AN=56;BaseQRankSum=7.881;DP=509;FS=3.085;HRun=11;HaplotypeScore=72.0189;InbreedingCoeff=0.8648;MQ=71.06;MQ0=5;MQRankSum=-1.739;QD=11.66;ReadPosRankSum=2.698;VQSLOD=3.5781;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,1:40:73.57:0,74,1010	1/1:1,3:4:8.99:74,9,0	0/0:31,0:19:21.96:0,22,208	0/0:33,0:21:12.59:0,13,209	1/1:5,26:31:68.87:563,69,0	1/1:3,0:18:30.55:88,31,0	0/1:1,0:12:8.39:35,0,8	1/1:5,2:39:59.40:203,59,0	1/1:1,0:15:18.33:53,18,0	1/1:3,14:17:41.95:345,42,0	1/1:0,19:19:50.94:419,51,0	0/0:17,1:18:17.47:0,17,383	0/0:13,0:14:38.96:0,39,396	1/1:2,11:14:25.99:203,26,0	1/1:0,1:23:41.70:137,42,0	1/1:1,0:11:12.22:35,12,0	1/1:2,0:28:38.70:112,39,0	1/1:7,19:26:31.38:375,31,0	1/1:2,9:11:26.96:221,27,0	1/1:2,4:6:11.97:98,12,0	1/1:0,4:4:8.99:74,9,0	0/0:5,0:5:15.01:0,15,150	0/0:12,0:14:38.93:0,39,398	0/0:10,1:11:5.43:0,5,263	1/1:1,0:13:22.41:65,22,0	1/1:3,16:20:49.96:397,50,0	1/1:1,19:21:18:343,18,0	1/1:0,6:8:19.06:135,19,0
chr10	77925598	.	TTTG	T	520.94	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.388;DP=506;FS=3.505;HRun=0;HaplotypeScore=92.3929;InbreedingCoeff=0.8197;MQ=72.65;MQ0=0;MQRankSum=-0.561;QD=22.65;ReadPosRankSum=-0.602;VQSLOD=3.4205;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:93.28:0,93,1818	0/0:8,0:8:18.06:0,18,372	0/0:19,0:18:39.04:0,39,597	0/0:21,0:19:14.90:0,15,474	0/0:15,0:15:39.10:0,39,716	0/0:18,0:18:54.13:0,54,995	0/0:19,0:19:51.01:0,51,925	0/0:41,0:41:87.20:0,87,1545	0/0:16,0:16:42.14:0,42,857	0/0:16,0:16:39.12:0,39,729	0/0:15,0:15:39.12:0,39,761	0/0:16,0:16:42.13:0,42,820	0/0:9,0:9:27.09:0,27,540	0/0:14,0:14:36.11:0,36,697	0/0:25,0:25:63.19:0,63,1255	0/0:20,0:20:54.19:0,54,1108	0/0:28,0:28:66.16:0,66,1236	1/1:4,19:23:42.14:616,42,0	0/0:9,0:9:18.01:0,18,202	0/0:9,0:9:20.99:0,21,221	0/0:3,0:8:3.01:0,3,40	0/0:12,0:12:27.08:0,27,502	0/0:15,0:15:39.13:0,39,780	0/0:14,0:14:33.10:0,33,613	0/0:17,0:17:42.12:0,42,829	0/0:30,0:30:63.22:0,63,1271	0/0:2,0:14:21.07:0,21,276	0/0:19,0:19:46.06:0,46,959
chr10	77925613	.	G	GTTGTTATTTATTTATTTAT	3891.77	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-5.099;DP=489;FS=10.793;HRun=0;HaplotypeScore=253.1219;InbreedingCoeff=0.8179;MQ=66.08;MQ0=0;MQRankSum=-4.625;QD=65.96;ReadPosRankSum=-2.406;VQSLOD=1.5377;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:93.32:0,93,4399	0/0:6,0:6:18.06:0,18,835	0/0:20,0:19:45.22:0,45,895	0/1:17,0:15:16.50:16,0,593	0/0:16,0:16:42.13:0,42,1419	0/0:20,0:20:42.08:0,42,2281	0/0:18,0:18:48.16:0,48,2172	0/0:38,0:38:90.28:0,90,2931	0/0:16,0:16:48.14:0,48,1768	0/0:15,0:15:39.13:0,39,1308	0/0:16,0:16:48.08:0,48,1892	0/0:16,0:16:39.13:0,39,1322	0/0:12,0:12:36.10:0,36,1364	0/0:15,0:15:42.06:0,42,1549	0/0:23,0:23:69.24:0,69,3113	0/0:19,0:19:57.20:0,57,2578	0/0:25,0:25:72.25:0,72,3141	0/0:24,0:24:57.15:0,57,2265	1/1:7,4:14:39.13:1763,39,0	1/1:9,0:9:27.04:546,27,0	1/1:4,0:4:3.01:85,3,0	0/0:11,0:11:30.10:0,30,1149	0/0:13,0:13:39.11:0,39,1339	0/0:14,0:14:38.49:0,38,1309	0/0:15,0:15:42.13:0,42,1929	0/0:24,0:24:72.18:0,72,2494	1/1:15,0:15:27.56:1481,28,0	0/0:19,0:19:54.16:0,54,2143
chr10	77926744	.	GA	G	5184.27	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-3.660;DP=497;FS=1.219;HRun=11;HaplotypeScore=70.5454;InbreedingCoeff=0.9424;MQ=71.71;MQ0=0;MQRankSum=-1.135;QD=19.79;ReadPosRankSum=2.012;VQSLOD=5.9381;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,2:34:56.56:0,57,807	1/1:0,7:7:20.98:172,21,0	0/0:16,0:14:20.57:0,21,140	0/0:7,0:5:5.05:0,5,42	1/1:4,5:9:14.04:121,14,0	1/1:1,17:19:52.98:425,53,0	1/1:1,8:9:20.97:172,21,0	1/1:7,25:32:45.88:581,46,0	1/1:6,15:21:56.93:468,57,0	1/1:1,18:19:53.94:443,54,0	1/1:1,14:15:38.94:320,39,0	0/0:5,0:20:38.74:0,39,201	0/0:2,0:25:51.59:0,52,285	1/1:6,18:24:50.92:419,51,0	1/1:0,13:14:35:277,35,0	1/1:2,14:16:38.94:320,39,0	1/1:2,19:21:21.96:387,22,0	0/0:27,0:28:71.99:0,72,741	0/0:7,0:13:28.93:0,29,173	0/0:2,0:16:40.15:0,40,214	0/0:0,0:7:14.20:0,14,71	0/0:5,1:14:1.12:0,1,90	0/0:5,0:13:28.72:0,29,165	0/0:1,0:19:39.36:0,39,199	1/1:2,15:17:18.89:319,19,0	1/1:4,23:27:68.89:563,69,0	0/0:2,0:22:40.02:0,40,210	1/1:4,8:12:23.96:197,24,0
chr10	77926922	.	CCT	C	5481.75	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=8.931;DP=417;FS=5.829;HRun=0;HaplotypeScore=51.8960;InbreedingCoeff=0.9823;MQ=81.16;MQ0=1;MQRankSum=-3.435;QD=40.31;ReadPosRankSum=1.500;VQSLOD=6.4206;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.32:0,93,1707	0/0:3,0:3:9.03:0,9,169	0/0:14,0:13:37.36:0,37,609	0/0:13,0:12:33.11:0,33,577	0/0:17,0:17:51.17:0,51,944	1/1:1,9:10:24.08:353,24,0	1/1:0,14:14:36.12:530,36,0	1/1:1,28:29:84.26:1196,84,0	1/1:0,17:17:51.17:751,51,0	0/0:12,0:12:36.12:0,36,649	0/0:12,0:12:36.12:0,36,674	0/0:11,0:11:30.10:0,30,562	0/0:20,0:20:60.19:0,60,1081	0/0:14,0:14:42.14:0,42,774	1/1:0,9:9:27.09:398,27,0	1/1:0,8:8:18.06:265,18,0	1/1:0,34:34:93.31:1370,93,0	0/0:17,0:17:51.17:0,51,955	0/0:5,0:5:15.05:0,15,271	0/0:9,0:9:27.09:0,27,506	0/0:25,0:25:75.26:0,75,1399	0/0:9,0:9:27.09:0,27,506	0/0:9,0:9:24.08:0,24,438	0/0:25,0:25:75.26:0,75,1389	1/1:0,15:15:42.14:619,42,0	0/0:16,0:16:48.16:0,48,889	0/0:6,0:6:15.05:0,15,281	0/0:13,0:13:39.13:0,39,730
chr10	77929459	.	A	AGACATATGAAG	12153.33	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-1.296;DP=748;FS=10.985;HRun=0;HaplotypeScore=229.6221;InbreedingCoeff=0.9927;MQ=85.78;MQ0=0;MQRankSum=-13.458;QD=105.68;ReadPosRankSum=-0.385;VQSLOD=3.7095;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,138,4512	0/0:14,0:14:39.12:0,39,1248	0/0:25,0:25:47.31:0,47,1384	0/0:28,0:28:63.12:0,63,1735	0/0:41,0:41:99:0,102,3193	0/0:19,0:19:54.16:0,54,1735	0/0:25,0:25:60.14:0,60,1564	0/0:37,0:37:90.30:0,90,2755	0/0:28,0:28:72.25:0,72,2365	0/0:24,0:23:54.19:0,54,1794	0/0:30,0:30:69.22:0,69,2186	0/0:33,0:33:81.28:0,81,2699	0/0:35,0:35:93.31:0,93,2942	0/0:30,0:30:78.24:0,78,2342	0/0:40,0:40:99:0,114,3664	0/0:21,0:21:60.21:0,60,1941	0/0:12,0:12:36.12:0,36,1149	1/1:7,5:13:12.04:670,12,0	1/1:15,6:22:51.12:2192,51,0	1/1:14,18:33:78.07:3743,78,0	1/1:10,7:19:42.03:2020,42,0	0/0:26,0:26:78.27:0,78,2547	0/0:20,0:20:54.19:0,54,1804	0/0:23,0:23:63.22:0,63,1950	0/0:30,0:30:75.24:0,75,2332	0/0:27,0:27:72.23:0,72,2281	1/1:17,10:27:69.24:3528,69,0	0/0:14,0:14:33.05:0,33,960
chr10	77929770	.	T	TTAA	8379.15	PASS	AB=0.624;AC=22;AF=0.393;AN=56;BaseQRankSum=-1.770;DP=562;FS=6.014;HRun=0;HaplotypeScore=81.6164;InbreedingCoeff=0.7012;MQ=67.39;MQ0=2;MQRankSum=-3.234;QD=32.48;ReadPosRankSum=2.875;VQSLOD=5.1632;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:76.52:0,77,1276	0/0:9,0:9:27.03:0,27,397	0/0:26,0:19:24.02:0,24,412	0/0:13,0:6:14.89:0,15,183	0/0:33,0:33:99:0,99,1496	1/1:4,17:22:51.18:1237,51,0	1/1:0,6:7:18.06:399,18,0	1/1:5,21:26:74.64:1436,75,0	1/1:1,10:13:27.09:633,27,0	0/0:20,0:20:60.16:0,60,1010	0/0:27,0:28:78.18:0,78,1252	0/0:16,0:16:48.11:0,48,758	0/0:27,0:27:81.21:0,81,1298	0/0:18,0:18:51.13:0,51,838	1/1:0,19:20:36.12:834,36,0	1/1:2,20:23:36.09:786,36,0	1/1:2,20:23:50.91:1196,51,0	1/1:2,0:21:50.74:577,51,0	0/1:15,0:21:12.21:12,0,213	0/1:6,0:21:53.33:53,0,84	0/1:2,0:8:20.95:21,0,45	0/0:22,0:22:62.49:0,62,1085	0/0:23,0:23:66.08:0,66,1130	0/0:16,0:16:48.16:0,48,873	1/1:3,26:29:48.16:1113,48,0	0/0:12,0:12:33.06:0,33,552	0/1:3,0:21:26.22:82,0,26	0/0:12,0:12:36.10:0,36,626
chr10	77930305	.	CCCCA	C	6326.24	PASS	AB=0.525;AC=15;AF=0.268;AN=56;BaseQRankSum=6.766;DP=520;FS=4.024;HRun=0;HaplotypeScore=93.7912;InbreedingCoeff=0.9065;MQ=64.07;MQ0=0;MQRankSum=-5.499;QD=37.43;ReadPosRankSum=1.792;VQSLOD=4.5321;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.18:0,87,1981	0/0:10,0:10:21.06:0,21,507	0/0:10,0:9:20.08:0,20,420	0/0:11,0:11:32.81:0,33,545	0/0:17,0:17:51.17:0,51,1224	1/1:1,20:21:36.12:653,36,0	1/1:9,9:18:44.91:711,45,0	1/1:18,14:32:74.80:1137,75,0	1/1:2,13:15:24.08:435,24,0	0/0:20,0:20:43.37:0,43,992	0/0:10,0:10:24.08:0,24,533	0/0:22,0:22:66.20:0,66,1503	0/0:17,0:17:51.16:0,51,1182	0/0:21,0:21:54.17:0,54,1243	1/1:1,20:21:48.16:845,48,0	1/1:4,22:26:57.09:995,57,0	0/1:2,19:21:27.71:756,0,28	0/0:10,0:10:27.09:0,27,669	0/0:11,0:11:33.11:0,33,721	0/0:25,0:25:63.20:0,63,1485	0/0:22,0:22:54.16:0,54,1314	0/0:18,0:18:51.15:0,51,1232	0/0:15,0:15:45.15:0,45,1125	0/0:18,0:18:54.18:0,54,1270	1/1:2,13:15:45.15:794,45,0	0/0:29,0:29:81.26:0,81,1907	0/0:20,0:19:57.19:0,57,1354	0/0:12,0:12:30.05:0,30,704
chr10	77930306	.	CCCA	C	3447.57	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=13.488;DP=517;FS=3.382;HRun=0;HaplotypeScore=93.2881;InbreedingCoeff=0.9081;MQ=63.20;MQ0=0;MQRankSum=-3.616;QD=20.52;ReadPosRankSum=1.510;VQSLOD=3.5646;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.18:0,87,1663	0/0:9,0:9:21.06:0,21,419	0/0:9,0:8:19.31:0,19,346	0/0:11,0:11:18.98:0,19,438	0/0:17,0:17:51.17:0,51,1029	1/1:21,0:21:36.04:341,36,0	1/1:17,1:18:47.97:465,48,0	1/1:31,0:31:72.28:619,72,0	1/1:14,1:15:24.03:227,24,0	0/0:20,0:20:43.92:0,44,828	0/0:8,0:8:24:0,24,424	0/0:22,0:22:66.16:0,66,1238	0/0:17,0:17:51.16:0,51,994	0/0:20,0:20:54.17:0,54,1047	1/1:21,0:21:47.78:431,48,0	1/1:24,2:26:57.07:560,57,0	0/1:21,0:21:14.98:380,0,15	0/0:11,0:11:30.06:0,30,574	0/0:11,0:11:33.11:0,33,613	0/0:25,0:25:63.20:0,63,1263	0/0:21,0:21:54.16:0,54,1096	0/0:19,0:19:54.15:0,54,1054	0/0:15,0:15:45.15:0,45,929	0/0:20,0:20:60.11:0,60,1098	1/1:15,0:15:45.05:424,45,0	0/0:28,0:28:81.26:0,81,1609	0/0:21,0:20:60.11:0,60,1137	0/0:12,0:12:30.05:0,30,588
chr10	77930308	.	CA	C	1842.83	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.748;DP=496;FS=5.967;HRun=1;HaplotypeScore=74.9716;InbreedingCoeff=0.9773;MQ=64.38;MQ0=0;MQRankSum=-4.744;QD=11.59;ReadPosRankSum=1.300;VQSLOD=1.9532;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.09:0,90,1076	0/0:7,0:7:21.06:0,21,262	0/0:9,0:8:17.68:0,18,224	0/0:11,1:12:12.21:0,12,273	0/0:17,0:17:51.15:0,51,655	1/1:20,0:20:35.01:198,35,0	1/1:15,1:16:45.42:262,45,0	1/1:29,1:30:70.88:433,71,0	1/1:14,0:14:23.31:132,23,0	0/0:17,0:17:42.08:0,42,523	0/0:8,0:8:23.97:0,24,261	0/0:22,0:22:65.81:0,66,782	0/0:17,0:17:51.12:0,51,626	0/0:18,0:18:54.02:0,54,630	1/1:20,0:20:45.31:252,45,0	1/1:24,0:24:55.52:317,56,0	1/1:20,0:20:6.99:207,7,0	0/0:12,0:12:33:0,33,378	0/0:12,0:12:32.44:0,32,388	0/0:23,0:23:63.19:0,63,800	0/0:19,0:19:57.16:0,57,723	0/0:18,0:18:54.15:0,54,681	0/0:15,0:15:45.13:0,45,570	0/0:21,0:21:63.03:0,63,726	1/1:14,1:15:43.75:247,44,0	0/0:27,0:27:81.24:0,81,1009	0/0:21,0:20:48.31:0,48,703	0/0:10,0:10:30.06:0,30,379
chr10	77930626	.	TA	T	613.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.949;DP=735;FS=1.952;HRun=1;HaplotypeScore=75.3399;InbreedingCoeff=0.9796;MQ=83.43;MQ0=0;MQRankSum=-2.422;QD=32.29;ReadPosRankSum=0.951;VQSLOD=3.4003;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1725	0/0:15,0:15:45.15:0,45,688	0/0:25,0:24:59.87:0,60,841	0/0:23,0:23:49.54:0,50,571	0/0:16,0:16:48.13:0,48,704	0/0:20,0:20:59.97:0,60,792	0/0:32,0:32:96.21:0,96,1391	0/0:23,0:23:69.20:0,69,1013	0/0:29,0:29:87.28:0,87,1300	0/0:34,0:34:99:0,102,1522	0/0:7,0:7:21.07:0,21,321	0/0:35,0:35:99:0,105,1557	0/0:38,0:38:99:0,114,1559	0/0:31,0:31:93.32:0,93,1414	0/0:35,0:35:99:0,99,1493	0/0:32,0:32:96.31:0,96,1446	0/0:30,0:30:90.28:0,90,1347	1/1:0,19:19:51.17:708,51,0	0/0:26,0:26:72.03:0,72,988	0/0:27,0:27:78.22:0,78,1131	0/0:39,0:39:99:0,114,1699	0/0:24,0:24:72.19:0,72,1031	0/0:9,0:9:27.07:0,27,380	0/0:22,0:22:66.18:0,66,984	0/0:25,0:25:72.21:0,72,1055	0/0:32,0:31:87.29:0,87,1330	0/0:44,0:43:99:0,132,1973	0/0:5,0:5:15.05:0,15,228
chr10	77930839	.	A	ATTT	16701.91	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=2.998;DP=682;FS=1.112;HRun=9;HaplotypeScore=118.5121;InbreedingCoeff=0.8939;MQ=71.26;MQ0=0;MQRankSum=-6.428;QD=33.54;ReadPosRankSum=-3.115;VQSLOD=3.3457;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,117,1478	1/1:5,0:9:18.06:252,18,0	0/0:12,0:13:12.96:0,13,310	0/1:13,0:14:2.88:3,0,180	1/1:18,0:40:76.93:1073,77,0	1/1:0,18:20:54.16:1012,54,0	1/1:9,23:33:78.27:1491,78,0	1/1:15,19:35:66.20:1226,66,0	1/1:1,16:17:33.11:648,33,0	1/1:17,0:35:75.24:1077,75,0	1/1:7,0:25:54.14:763,54,0	1/1:5,9:17:28.34:519,28,0	1/1:2,16:18:36.12:685,36,0	1/1:12,0:16:30.10:418,30,0	1/1:10,18:31:57.17:1028,57,0	1/1:2,23:27:66.18:1229,66,0	1/1:4,19:24:4.22:695,4,0	0/0:15,0:15:45.13:0,45,554	0/0:21,0:21:45.09:0,45,569	0/0:31,0:31:90.25:0,90,1124	0/0:13,0:13:30.08:0,30,379	1/1:6,25:33:78.24:1403,78,0	1/1:3,15:18:33.11:651,33,0	1/1:3,20:24:45.15:888,45,0	1/1:6,17:26:54.13:907,54,0	1/1:15,0:29:47.19:648,47,0	0/0:41,0:42:99:0,117,1458	1/1:4,0:6:6.02:86,6,0
chr10	77931820	.	TA	T	12526.10	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=14.079;DP=795;FS=5.534;HRun=9;HaplotypeScore=93.7392;InbreedingCoeff=0.9876;MQ=79.98;MQ0=0;MQRankSum=-3.672;QD=22.73;ReadPosRankSum=3.260;VQSLOD=5.4138;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,135,1506	1/1:1,7:8:15:137,15,0	0/0:24,0:24:53.04:0,53,505	0/0:19,0:19:40.19:0,40,417	1/1:3,33:36:92.92:827,93,0	1/1:8,26:34:69.03:632,69,0	1/1:4,24:28:69.03:632,69,0	1/1:6,25:31:75.02:682,75,0	1/1:4,19:23:51.02:467,51,0	1/1:1,31:32:93.04:847,93,0	1/1:4,18:22:51.02:467,51,0	1/1:1,27:28:69.04:631,69,0	1/1:2,29:31:84.04:768,84,0	1/1:4,39:44:78.48:959,78,0	1/1:4,28:32:69.03:632,69,0	1/1:2,22:24:57.02:522,57,0	1/1:3,28:31:77.96:714,78,0	0/0:26,0:26:75.18:0,75,850	0/0:33,0:33:78.22:0,78,885	0/0:40,0:40:99:0,117,1276	0/0:24,0:24:60.15:0,60,673	1/1:2,33:35:93:843,93,0	1/1:0,26:26:75.04:686,75,0	1/1:2,18:20:57.03:522,57,0	1/1:4,25:29:72.03:659,72,0	1/1:3,30:33:92.89:818,93,0	0/0:26,0:26:66.18:0,66,751	1/1:1,3:4:9:82,9,0
chr10	77931934	.	GGT	G	17832.17	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=14.280;DP=866;FS=9.182;HRun=0;HaplotypeScore=108.9769;InbreedingCoeff=0.9772;MQ=73.49;MQ0=6;MQRankSum=-3.829;QD=30.17;ReadPosRankSum=4.397;VQSLOD=6.8172;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:67,0:67:99:0,178,2959	1/1:4,13:17:39.12:496,39,0	0/0:27,0:25:58.76:0,59,848	0/0:29,0:26:4.60:0,5,597	1/1:4,25:29:63.20:802,63,0	1/1:3,20:23:42.13:535,42,0	1/1:3,34:37:87.28:1108,87,0	1/1:7,33:40:99:1259,99,0	1/1:8,22:30:57.18:726,57,0	1/1:6,22:28:69.21:865,69,0	1/1:2,19:21:51.16:649,51,0	1/1:6,29:35:81.09:1031,81,0	1/1:5,28:33:84.27:1070,84,0	1/1:4,30:34:90.29:1146,90,0	1/1:4,32:36:87.28:1108,87,0	1/1:7,25:32:69.22:879,69,0	1/1:2,26:28:75.24:955,75,0	0/0:23,0:23:60.20:0,60,995	0/0:26,0:26:66.18:0,66,1028	0/0:34,0:34:90.31:0,90,1494	0/0:46,0:46:99:0,126,2096	1/1:5,23:27:60.19:764,60,0	1/1:1,29:30:87.28:1108,87,0	1/1:2,24:26:63.20:802,63,0	1/1:3,26:29:72.23:917,72,0	1/1:5,30:33:84.24:1042,84,0	0/0:23,0:23:54.18:0,54,903	1/1:2,18:17:45.14:573,45,0
chr10	77934685	.	A	AGGTAGGAC	39412.84	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-14.334;DP=622;FS=22.801;HRun=0;HaplotypeScore=127.9189;InbreedingCoeff=0.9983;MQ=53.80;MQ0=0;MQRankSum=-16.683;QD=97.08;ReadPosRankSum=3.298;VQSLOD=3.4624;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,3563	1/1:0,8:10:24.08:1105,24,0	0/0:25,0:25:62.38:0,62,1642	0/0:22,0:22:66.18:0,66,1631	1/1:0,14:22:39.05:1649,39,0	1/1:0,13:17:39.13:1795,39,0	1/1:0,18:26:54.19:2480,54,0	1/1:0,22:45:99:4800,132,0	1/1:0,19:26:57.20:2619,57,0	1/1:0,9:11:33.06:1286,33,0	1/1:0,13:15:33.11:1515,33,0	1/1:1,11:19:36.59:1656,37,0	1/1:0,19:29:60.21:2752,60,0	1/1:0,20:27:60.21:2759,60,0	1/1:0,19:28:58.08:2625,58,0	1/1:0,9:11:27.09:1239,27,0	1/1:1,9:14:27.09:1240,27,0	0/0:21,0:21:60.17:0,60,1675	0/0:19,0:19:57.15:0,57,1382	0/0:27,0:27:81.22:0,81,2174	0/0:38,0:38:99:0,114,3402	1/1:0,17:24:54.19:2421,54,0	1/1:0,10:17:27.56:1239,28,0	1/1:1,6:13:21.07:881,21,0	1/1:0,13:16:39.13:1795,39,0	1/1:0,13:20:56.93:2043,57,0	0/0:16,0:16:48.16:0,48,1452	1/1:0,11:16:33.11:1511,33,0
chr10	77934910	.	T	TTC	13662.13	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-4.151;DP=502;FS=1.709;HRun=0;HaplotypeScore=83.5666;InbreedingCoeff=0.9703;MQ=78.66;MQ0=3;MQRankSum=-4.240;QD=46.79;ReadPosRankSum=3.327;VQSLOD=6.3044;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.12:0,93,1263	1/1:1,4:5:15.05:274,15,0	0/0:34,0:27:55.87:0,56,824	0/0:61,1:40:7.21:0,7,504	1/1:2,10:11:30.10:550,30,0	1/1:0,7:7:18.06:329,18,0	1/1:1,23:25:63.22:1155,63,0	1/1:2,21:23:60.17:1026,60,0	1/1:2,14:16:36.12:660,36,0	1/1:1,14:15:42.14:770,42,0	1/1:0,10:11:27.09:476,27,0	1/1:0,13:13:36.12:660,36,0	1/1:1,7:8:24.08:434,24,0	1/1:0,11:11:24.08:440,24,0	1/1:0,16:16:42.14:751,42,0	1/1:2,14:16:39.13:715,39,0	1/1:0,22:22:63.22:1154,63,0	0/0:9,0:9:27.09:0,27,387	0/0:9,0:9:24.01:0,24,285	0/0:18,0:18:48.16:0,48,688	0/0:31,0:31:84.27:0,84,1185	1/1:1,11:12:33.11:604,33,0	1/1:2,11:13:36.12:658,36,0	1/1:2,25:27:34.15:1226,34,0	1/1:2,8:10:24.08:440,24,0	1/1:1,22:23:66.22:1175,66,0	0/0:13,0:13:39.11:0,39,538	1/1:3,3:6:9.03:165,9,0
chr10	77935794	.	C	CT	6889.75	PASS	AB=0.563;AC=39;AF=0.696;AN=56;BaseQRankSum=-4.376;DP=610;FS=31.569;HRun=11;HaplotypeScore=92.1349;InbreedingCoeff=0.8182;MQ=71.02;MQ0=0;MQRankSum=-3.070;QD=15.31;ReadPosRankSum=-3.470;VQSLOD=2.5442;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:73.68:0,74,563	0/1:2,7:9:22.46:148,0,22	0/0:14,0:16:4.41:0,4,97	0/0:9,0:10:18.73:0,19,105	1/1:4,19:25:53.66:484,54,0	1/1:4,17:21:42.08:426,42,0	1/1:7,13:20:4.29:222,4,0	1/1:8,22:31:68.71:630,69,0	1/1:2,1:17:19.80:105,20,0	1/1:8,27:35:72.10:716,72,0	1/1:3,16:21:45.11:401,45,0	1/1:17,0:22:24.49:131,24,0	1/1:18,0:18:24.85:141,25,0	1/1:5,18:23:12.85:312,13,0	1/1:8,11:21:44.86:418,45,0	1/1:16,13:30:56.05:522,56,0	1/1:4,24:28:39.89:586,40,0	0/0:19,0:21:46.87:0,47,357	0/0:18,0:20:42.40:0,42,308	0/0:18,0:18:3.30:0,3,276	0/0:15,0:15:20.87:0,21,162	1/1:7,0:13:7.76:39,8,0	1/1:15,0:30:45.22:228,45,0	1/1:15,0:23:13.68:64,14,0	1/1:4,26:30:63.13:640,63,0	1/1:8,15:24:44.91:434,45,0	0/0:22,2:26:17.34:0,17,318	1/1:1,8:9:24.05:244,24,0
chr10	77936784	.	TGGA	T	8208.97	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.916;DP=608;FS=10.716;HRun=0;HaplotypeScore=87.8507;InbreedingCoeff=0.9995;MQ=91.13;MQ0=0;MQRankSum=-5.395;QD=51.31;ReadPosRankSum=2.189;VQSLOD=6.6838;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,2898	0/0:8,0:8:24.08:0,24,592	0/0:25,0:26:78.23:0,78,1771	0/0:25,0:25:75.22:0,75,1735	0/0:21,0:21:63.22:0,63,1537	1/1:0,18:18:51.17:951,51,0	1/1:0,14:14:36.12:671,36,0	1/1:0,31:31:90.31:1668,90,0	1/1:0,23:23:63.22:1173,63,0	0/0:21,0:21:63.22:0,63,1545	0/0:26,0:26:78.27:0,78,1920	0/0:11,0:11:33.11:0,33,814	0/0:21,0:21:63.22:0,63,1537	0/0:18,0:18:54.19:0,54,1296	1/1:0,17:17:51.17:950,51,0	1/1:0,22:22:60.21:1118,60,0	1/1:0,14:14:42.14:782,42,0	0/0:17,0:17:51.13:0,51,1203	0/0:18,0:18:54.19:0,54,1304	0/0:25,0:25:75.26:0,75,1829	0/0:34,0:34:99:0,102,2514	0/0:20,0:20:57.20:0,57,1407	0/0:20,0:20:60.21:0,60,1464	0/0:30,0:30:90.31:0,90,2215	1/1:0,21:21:48.16:895,48,0	0/0:32,0:32:93.32:0,93,2289	0/0:23,0:23:69.24:0,69,1701	0/0:11,0:11:33.11:0,33,814
chr10	77938157	.	GCAGCAACAA	G	4920.59	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.441;DP=767;FS=5.848;HRun=0;HaplotypeScore=208.1822;InbreedingCoeff=0.9733;MQ=63.14;MQ0=1;MQRankSum=-4.217;QD=33.25;ReadPosRankSum=0.006;VQSLOD=4.1660;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:90.26:0,90,2528	1/1:1,15:16:24.08:694,24,0	0/0:24,0:19:21.12:0,21,748	0/0:27,0:25:46.02:0,46,1115	1/1:3,18:21:20.98:410,21,0	0/0:27,0:27:69.24:0,69,2197	0/0:32,0:32:75.23:0,75,2771	0/0:21,0:21:42.13:0,42,1210	0/0:26,0:26:72.21:0,72,3016	1/1:4,17:21:38.91:558,39,0	1/1:5,16:21:7.68:243,8,0	0/0:34,0:34:93.29:0,93,3738	0/0:38,0:38:99:0,105,4299	1/1:3,29:32:63.22:1719,63,0	0/0:35,0:35:99:0,102,4363	0/0:27,0:27:72.23:0,72,3010	0/0:30,0:30:81.25:0,81,3129	0/0:20,0:19:51.17:0,51,2297	0/0:27,0:27:63.20:0,63,1942	0/0:24,0:24:60.21:0,60,1838	0/0:36,0:36:73.60:0,74,2632	0/0:25,0:25:60.19:0,60,1436	0/0:18,0:18:39.10:0,39,774	0/0:46,0:46:99:0,126,4676	0/0:27,0:27:78.27:0,78,2412	1/1:1,21:23:60.02:1044,60,0	0/0:38,0:37:99:0,102,3845	1/1:4,10:14:9.03:251,9,0
chr10	77941210	.	CT	C	4817.32	PASS	AB=0.944;AC=32;AF=0.571;AN=56;BaseQRankSum=-8.708;DP=514;FS=6.944;HRun=11;HaplotypeScore=62.0803;InbreedingCoeff=0.7860;MQ=64.28;MQ0=8;MQRankSum=1.744;QD=15.15;ReadPosRankSum=2.114;VQSLOD=5.4034;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:32:16.02:0,16,560	1/1:0,9:8:14.98:123,15,0	0/0:29,1:16:2.99:0,3,207	0/1:18,0:9:18.61:19,0,71	1/1:3,21:22:53.93:443,54,0	1/1:3,16:18:41.95:345,42,0	1/1:1,11:10:23.97:197,24,0	1/1:9,20:29:59.91:492,60,0	1/1:4,14:19:37.98:301,38,0	1/1:2,15:18:43.95:348,44,0	1/1:3,20:24:49.93:400,50,0	0/0:1,0:8:11.36:0,11,57	0/0:3,0:14:22.83:0,23,118	1/1:1,11:13:32:252,32,0	1/1:3,10:12:11.98:99,12,0	1/1:0,14:13:29.97:246,30,0	1/1:7,24:31:49.44:391,49,0	0/1:7,1:7:31.16:31,0,110	0/0:7,0:21:40.68:0,41,232	0/0:7,0:28:48.07:0,48,243	0/0:1,0:5:5.85:0,6,46	0/0:3,0:9:14.31:0,14,75	0/0:4,0:19:33.74:0,34,165	0/0:2,0:9:11.36:0,11,57	1/1:6,25:31:59.90:492,60,0	1/1:4,16:20:9.93:288,10,0	0/0:4,0:18:34.12:0,34,171	1/1:1,14:16:43.98:350,44,0
chr10	77942249	.	T	TG	2075.38	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-6.071;DP=666;FS=8.911;HRun=8;HaplotypeScore=72.0827;InbreedingCoeff=0.9186;MQ=76.82;MQ0=0;MQRankSum=-0.283;QD=19.96;ReadPosRankSum=-0.689;VQSLOD=2.8061;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.04:0,87,793	0/0:10,0:10:29.99:0,30,268	0/0:16,0:16:22.89:0,23,309	0/0:21,0:21:56.45:0,56,465	0/0:18,0:18:51.01:0,51,462	0/0:26,0:26:68.96:0,69,617	0/0:35,0:35:87.04:0,87,796	0/0:27,0:27:62.98:0,63,560	0/0:16,1:17:1.43:0,1,267	0/0:31,0:31:84.04:0,84,769	0/0:15,0:15:36.01:0,36,329	0/0:33,0:33:84.04:0,84,769	0/0:20,0:20:47.90:0,48,422	0/0:23,0:23:57:0,57,517	0/0:33,0:33:87.03:0,87,791	0/0:29,0:29:81.04:0,81,741	0/0:25,0:27:79.07:0,79,686	0/0:22,0:22:60.02:0,60,549	1/1:7,11:19:13.76:370,14,0	1/1:4,8:12:20.98:213,21,0	1/1:5,31:36:41.75:734,42,0	0/0:21,0:21:60.03:0,60,549	0/0:23,0:23:60.02:0,60,544	0/0:36,0:36:93.04:0,93,851	0/0:17,0:17:30:0,30,271	0/0:26,0:26:69.11:0,69,650	1/1:5,32:36:81.20:915,81,0	0/0:3,0:3:8.99:0,9,77
chr10	77942493	.	TGC	T	1469.63	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=12.629;DP=660;FS=11.174;HRun=0;HaplotypeScore=132.4642;InbreedingCoeff=0.3790;MQ=61.73;MQ0=9;MQRankSum=-0.905;QD=6.42;ReadPosRankSum=2.444;VQSLOD=2.9237;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:76.12:0,76,1769	0/1:6,0:6:30.45:31,0,30	0/0:34,0:19:43.73:0,44,439	0/0:27,0:14:11.02:0,11,189	0/1:18,0:18:13.11:89,0,13	0/0:25,0:25:35.55:0,36,1075	0/0:34,0:34:72.51:0,73,1506	0/0:19,0:18:35.43:0,35,549	0/0:15,0:15:44.51:0,45,638	0/1:25,0:25:71.59:193,0,72	0/1:12,0:12:18.05:45,0,18	1/1:24,2:26:37.59:270,38,0	1/1:26,0:25:21.43:181,21,0	0/1:24,0:24:17.05:184,0,17	0/0:28,0:28:49.56:0,50,977	0/0:17,0:17:32.73:0,33,479	0/0:45,0:44:99:0,117,1882	0/0:29,0:29:82.08:0,82,1320	0/0:16,0:14:26.56:0,27,180	0/0:12,0:12:6.30:0,6,87	0/0:36,0:36:7.85:0,8,136	1/1:25,1:26:17.52:157,18,0	1/1:14,2:16:23.61:173,24,0	1/1:19,0:19:8.18:110,8,0	0/0:26,0:26:58.43:0,58,1173	0/1:25,0:25:99:141,0,148	0/0:17,0:17:5.19:0,5,68	0/1:6,0:6:6.33:81,0,6
chr10	77942495	.	CGT	C	2609.32	PASS	AB=0.910;AC=27;AF=0.482;AN=56;BaseQRankSum=10.821;DP=650;FS=4.336;HRun=0;HaplotypeScore=127.5240;InbreedingCoeff=0.5390;MQ=59.68;MQ0=9;MQRankSum=0.254;QD=8.36;ReadPosRankSum=1.805;VQSLOD=3.0066;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,2:49:1.66:0,2,1280	1/1:2,4:6:9.03:109,9,0	0/0:32,0:17:12.83:0,13,119	0/0:26,0:12:2.97:0,3,20	1/1:2,15:17:27.08:327,27,0	0/0:24,0:24:28.16:0,28,842	0/0:36,0:36:26.55:0,27,1273	0/0:18,2:19:6.16:0,6,525	0/0:15,0:15:22:0,22,498	1/1:5,18:24:60.01:689,60,0	1/1:2,9:12:14.24:131,14,0	0/1:26,0:26:31.38:31,0,60	0/1:26,0:25:14.06:14,0,20	1/1:2,20:23:35.93:403,36,0	0/1:28,0:28:20.74:21,0,660	0/0:12,0:16:28.92:0,29,372	0/0:43,2:44:96.28:0,96,1458	0/0:29,0:29:52.73:0,53,1015	0/1:3,0:14:37.95:56,0,38	1/1:4,0:11:14.20:70,14,0	1/1:8,0:35:27.95:155,28,0	0/1:25,0:25:6.09:6,0,53	1/1:16,0:16:9.93:34,10,0	0/0:19,0:19:3.01:0,3,34	0/0:26,1:27:32.85:0,33,966	1/1:8,15:25:50.36:531,50,0	1/1:4,0:17:11.36:55,11,0	1/1:0,5:5:15.05:179,15,0
chr10	77942515	.	CGTGTGTGTGTGT	C	2865.97	PASS	AB=0.870;AC=9;AF=0.161;AN=56;BaseQRankSum=9.406;DP=645;FS=1.519;HRun=0;HaplotypeScore=220.1889;InbreedingCoeff=0.8919;MQ=55.27;MQ0=8;MQRankSum=-9.410;QD=27.04;ReadPosRankSum=1.132;VQSLOD=2.7614;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:49:99:0,114,5156	0/0:6,0:7:15:0,15,383	0/0:16,0:6:12.04:0,12,381	0/0:26,0:4:3.01:0,3,73	0/0:19,0:19:36.12:0,36,1432	0/0:25,0:26:72.25:0,72,3533	0/0:40,0:42:99:0,120,5338	0/0:23,0:21:57.67:0,58,1819	0/0:15,0:15:42.14:0,42,1965	0/0:25,0:27:78.19:0,78,2676	0/0:11,0:11:15.05:0,15,624	1/1:5,18:23:32.98:1131,33,0	1/1:8,16:23:17.94:671,18,0	0/0:26,0:26:51.16:0,51,1884	0/0:22,0:22:60.20:0,60,2968	0/0:15,0:16:32.52:0,33,1707	0/0:42,0:42:99:0,108,5237	0/0:28,0:28:78.27:0,78,3535	0/0:20,0:18:42.14:0,42,1038	0/0:8,0:8:18.06:0,18,579	0/0:36,0:37:47.76:0,48,1442	1/1:2,22:24:20.88:661,21,0	1/1:4,10:15:18.06:559,18,0	0/1:17,3:20:0:0,0,0	0/0:28,0:28:78.26:0,78,3791	0/0:23,0:23:69.15:0,69,2390	0/0:17,0:17:29.84:0,30,679	0/0:10,0:11:33.11:0,33,954
chr10	77942536	.	G	GCGCA	813.35	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.305;DP=595;FS=9.494;HRun=0;HaplotypeScore=139.7436;InbreedingCoeff=0.9353;MQ=59.14;MQ0=1;MQRankSum=-5.727;QD=9.46;ReadPosRankSum=-2.314;VQSLOD=1.8202;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:96.17:0,96,1636	0/0:11,0:11:24.04:0,24,357	0/0:6,0:4:8.34:0,8,75	0/0:17,0:7:17.81:0,18,151	0/0:18,0:18:36.12:0,36,654	0/0:24,0:24:60.16:0,60,1094	0/0:33,0:33:93.29:0,93,1674	0/0:26,0:25:66.12:0,66,1111	0/0:14,0:14:39.11:0,39,714	0/0:26,0:26:75.18:0,75,1323	0/0:9,0:9:26.97:0,27,316	1/1:21,0:21:37.86:245,38,0	1/1:27,0:27:43.01:350,43,0	0/0:20,0:20:39.13:0,39,748	0/0:22,0:22:63.13:0,63,1099	0/0:13,0:13:30.10:0,30,566	0/0:42,0:42:99:0,111,1906	0/0:25,0:25:72.04:0,72,1252	0/0:15,0:15:45:0,45,714	0/0:12,0:12:32.66:0,33,494	0/0:31,0:31:67.87:0,68,1142	1/1:25,0:25:23.94:229,24,0	1/1:13,0:13:22.85:147,23,0	0/0:6,11:18:0:0,0,0	0/0:30,0:30:72.20:0,72,1313	0/0:24,0:24:72.24:0,72,1350	0/0:18,0:18:42.11:0,42,738	0/0:13,0:13:36.10:0,36,655
chr10	77942830	.	GA	G	3991.32	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=0.860;DP=481;FS=12.168;HRun=8;HaplotypeScore=61.2186;InbreedingCoeff=0.9854;MQ=71.26;MQ0=1;MQRankSum=-0.831;QD=23.90;ReadPosRankSum=1.851;VQSLOD=3.6937;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.21:0,72,858	0/0:6,0:6:18.04:0,18,199	0/0:12,0:12:23.45:0,23,222	0/0:12,0:10:14.18:0,14,155	0/0:19,0:19:54.16:0,54,642	1/1:1,18:19:45.06:430,45,0	1/1:1,16:17:45.07:434,45,0	1/1:5,24:29:66.09:637,66,0	1/1:2,15:17:45.07:435,45,0	0/0:18,0:18:54.16:0,54,642	0/0:12,0:12:27.07:0,27,316	0/0:17,0:17:36.11:0,36,435	0/0:20,0:20:54.16:0,54,646	0/0:22,0:22:63.19:0,63,761	1/1:1,18:19:54.09:521,54,0	1/1:5,17:22:42.06:406,42,0	1/1:0,27:26:72.12:695,72,0	0/0:15,0:15:39.08:0,39,455	0/0:11,0:11:33.08:0,33,378	0/0:17,0:17:48.15:0,48,575	0/0:13,0:13:36.10:0,36,423	0/0:15,0:15:42.13:0,42,506	0/0:11,0:11:27.08:0,27,324	0/0:24,0:24:60.18:0,60,720	1/1:1,16:17:45.07:435,45,0	0/0:22,1:23:31.21:0,31,658	0/0:15,1:16:13.15:0,13,442	0/0:4,0:4:12.04:0,12,145
chr10	77942901	.	TCACACA	T	621.03	PASS	AB=0.714;AC=17;AF=0.340;AN=50;BaseQRankSum=0.596;DP=485;FS=0.000;HRun=0;HaplotypeScore=103.3921;InbreedingCoeff=0.6911;MQ=73.89;MQ0=17;MQRankSum=-1.779;QD=4.50;ReadPosRankSum=2.193;VQSLOD=1.8390;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:21.07:0,21,591	0/0:7,0:7:5.94:0,6,149	./.	./.	0/0:11,0:17:9.01:0,9,208	./.	1/1:16,10:26:3.01:51,3,0	1/1:24,0:24:2.49:21,2,0	1/1:10,1:11:9.47:110,9,0	0/0:14,0:14:12.93:0,13,369	0/0:9,0:9:12.04:0,12,329	0/0:21,0:20:22.02:0,22,574	0/0:10,0:10:6.02:0,6,161	0/0:10,0:17:9.03:0,9,187	1/1:12,3:16:17.06:231,17,0	1/1:12,2:14:12.03:206,12,0	1/1:22,0:19:6.55:107,7,0	0/1:6,0:10:0:0,0,0	0/0:11,0:10:5.95:0,6,42	0/0:9,0:15:18.03:0,18,203	0/0:18,0:24:9:0,9,80	0/0:13,0:14:8.73:0,9,215	0/0:13,0:14:9.01:0,9,244	0/0:26,0:26:36.10:0,36,821	1/1:8,0:8:3.01:49,3,0	0/0:18,0:19:27.95:0,28,501	1/1:4,0:5:0.88:2,1,0	0/0:11,0:10:21.07:0,21,621
chr10	77945011	.	A	ATG	5675.20	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-14.621;DP=661;FS=4.065;HRun=0;HaplotypeScore=92.8952;InbreedingCoeff=0.9916;MQ=66.49;MQ0=9;MQRankSum=0.610;QD=30.84;ReadPosRankSum=0.055;VQSLOD=6.5093;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:93.12:0,93,1053	0/0:10,0:10:27.02:0,27,321	0/0:25,0:18:30.75:0,31,389	0/0:32,0:19:14.80:0,15,256	0/0:33,0:33:81.15:0,81,937	1/1:3,16:19:29.94:498,30,0	1/1:1,10:11:21.07:349,21,0	1/1:12,24:36:84.13:1097,84,0	1/1:2,13:15:33.11:548,33,0	0/0:41,0:41:99:0,99,1215	0/0:20,0:20:48.14:0,48,593	0/0:23,0:23:41.45:0,41,291	0/0:14,0:14:26.21:0,26,220	0/0:21,0:21:57.13:0,57,666	1/1:3,18:22:17.69:624,18,0	1/1:2,24:24:54.18:897,54,0	1/1:6,22:28:48.06:764,48,0	0/0:23,0:23:54.07:0,54,620	0/0:25,0:25:50.72:0,51,579	0/0:32,0:32:85.10:0,85,1019	0/0:22,0:22:63.09:0,63,698	0/0:19,0:19:35.71:0,36,254	0/0:20,0:20:26.76:0,27,188	0/0:23,0:23:56.56:0,57,405	1/1:3,23:26:54.18:898,54,0	0/0:17,0:17:48.11:0,48,558	0/0:29,0:28:72.17:0,72,877	0/0:8,0:8:15.03:0,15,174
chr10	77945022	.	TGAGA	T	3082.16	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.460;DP=688;FS=3.859;HRun=0;HaplotypeScore=129.6678;InbreedingCoeff=0.9979;MQ=65.98;MQ0=11;MQRankSum=1.715;QD=28.28;ReadPosRankSum=4.684;VQSLOD=3.5495;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:37:89.73:0,90,1811	0/0:9,0:9:24.08:0,24,611	0/0:26,0:18:34.54:0,35,504	0/0:34,0:19:23.09:0,23,331	0/0:32,0:34:92.87:0,93,1773	0/0:18,0:18:35.70:0,36,659	0/0:12,0:12:24.08:0,24,478	0/0:37,0:37:78.73:0,79,1130	0/0:15,0:15:34.49:0,34,719	0/0:41,0:41:99:0,117,2640	0/0:22,1:23:54.18:0,54,1167	1/1:2,22:24:36.12:631,36,0	1/1:1,15:16:36.12:629,36,0	0/0:26,0:26:66.23:0,66,1492	0/0:22,0:22:39.50:0,39,701	0/0:29,0:27:60.17:0,60,1078	0/0:30,0:29:39.41:0,39,781	0/0:19,0:19:45.15:0,45,1035	0/0:22,0:22:60.20:0,60,1227	0/0:34,0:35:55.16:0,55,2144	0/0:26,0:27:72:0,72,1475	1/1:0,23:23:36.12:631,36,0	1/1:3,17:20:27.09:473,27,0	1/1:3,23:26:51.17:894,51,0	0/0:27,0:27:58.12:0,58,1032	0/0:17,0:18:47.94:0,48,957	0/0:27,0:26:78.27:0,78,1701	0/0:11,0:11:33.11:0,33,760
chr10	77946112	.	C	CTTT	2287.07	PASS	AB=0.540;AC=42;AF=0.750;AN=56;BaseQRankSum=6.588;DP=524;FS=3.254;HRun=10;HaplotypeScore=121.8381;InbreedingCoeff=0.4296;MQ=75.64;MQ0=0;MQRankSum=-3.315;QD=5.19;ReadPosRankSum=1.127;VQSLOD=-0.2439;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:72.06:0,72,876	1/1:2,0:9:9.20:34,9,0	0/0:14,0:16:14.22:0,14,225	0/0:12,0:10:14.79:0,15,130	1/1:1,0:27:19.57:50,20,0	1/1:2,0:17:16.20:38,16,0	1/1:3,0:15:11.21:26,11,0	1/1:2,0:25:25.11:81,25,0	0/1:4,0:21:16.04:20,0,16	0/1:3,0:27:26.10:45,0,26	1/1:1,0:15:7.81:40,8,0	1/1:7,1:13:23.11:321,23,0	1/1:6,1:13:18.04:259,18,0	1/1:3,0:17:12.10:29,12,0	1/1:2,0:22:17.44:41,17,0	1/1:4,0:15:12.46:29,12,0	0/1:2,0:27:9.81:28,0,10	0/0:23,0:23:60.09:0,60,698	0/1:4,0:20:2.56:19,0,3	0/1:3,0:31:3.18:84,0,3	1/1:1,0:14:14.95:35,15,0	1/1:13,0:20:36.12:544,36,0	1/1:8,0:15:18.02:229,18,0	1/1:8,0:19:27.52:367,28,0	1/1:2,0:15:15.45:52,15,0	1/1:5,0:18:17.93:58,18,0	0/1:4,0:20:17.49:17,0,24	1/1:0,0:6:7.48:17,7,0
chr10	77947833	.	AGT	A	10916.32	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=15.083;DP=699;FS=0.939;HRun=0;HaplotypeScore=84.8575;InbreedingCoeff=0.9999;MQ=82.74;MQ0=2;MQRankSum=-1.559;QD=35.79;ReadPosRankSum=2.474;VQSLOD=7.0130;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1857	0/0:10,0:10:30.10:0,30,542	0/0:22,0:22:50.91:0,51,977	0/0:24,0:24:66.17:0,66,1049	0/0:35,0:35:99:0,102,1867	1/1:0,29:28:69.23:1016,69,0	1/1:0,19:19:48.16:699,48,0	1/1:3,30:33:87.15:1134,87,0	1/1:0,24:24:57.19:832,57,0	0/0:25,0:25:75.25:0,75,1347	0/0:32,0:32:90.31:0,90,1676	1/1:1,13:14:36.12:530,36,0	1/1:0,21:21:54.18:795,54,0	0/0:31,0:31:93.32:0,93,1657	1/1:0,31:31:69.23:1016,69,0	1/1:1,24:25:63.21:928,63,0	1/1:0,24:24:69.23:1016,69,0	0/0:12,0:12:33.11:0,33,597	0/0:22,0:22:63.20:0,63,1118	0/0:30,0:30:87.28:0,87,1582	0/0:38,0:38:99:0,111,1952	1/1:2,24:25:66.22:964,66,0	1/1:0,17:17:42.14:618,42,0	1/1:2,14:16:42.14:618,42,0	1/1:3,23:26:51.09:751,51,0	0/0:38,0:38:99:0,108,1975	0/0:25,0:25:75.26:0,75,1387	0/0:14,0:14:39.13:0,39,708
chr10	77947935	.	C	CCTCTCTCTCT	1294.83	PASS	AB=0.960;AC=19;AF=0.352;AN=54;BaseQRankSum=0.017;DP=638;FS=45.735;HRun=0;HaplotypeScore=194.1831;InbreedingCoeff=0.3798;MQ=67.60;MQ0=12;MQRankSum=-4.512;QD=4.50;ReadPosRankSum=-3.378;VQSLOD=0.6560;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:56.79:0,57,1470	0/0:12,0:12:8.76:0,9,173	./.	0/0:32,0:22:3.01:0,3,32	0/0:19,0:18:17.97:0,18,346	0/1:28,0:28:24.69:25,0,308	0/0:28,0:28:9.02:0,9,161	0/1:35,0:35:35.17:35,0,45	0/0:11,0:12:12.04:0,12,351	0/0:21,0:20:2.52:0,3,328	0/0:18,0:18:15.89:0,16,321	1/1:19,0:18:2.90:90,3,0	0/1:15,5:19:0:0,0,0	0/0:21,0:21:26.96:0,27,587	0/0:29,0:29:35.17:0,35,625	0/0:21,0:21:14.06:0,14,365	0/0:21,0:20:0.53:0,1,591	0/0:13,0:13:3.55:0,4,275	1/1:24,0:26:22.88:616,23,0	1/1:34,0:33:3:25,3,0	1/1:29,0:27:17.71:303,18,0	1/1:24,0:24:2.94:18,3,0	0/0:21,0:20:0:0,0,0	1/1:17,0:17:9.49:201,9,0	0/1:18,0:18:30.87:31,0,134	0/0:22,0:21:21.02:0,21,561	1/1:14,0:17:3.01:104,3,0	0/1:19,0:16:8.21:8,0,179
chr10	77949104	.	T	TC	4601.67	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-13.956;DP=654;FS=2.602;HRun=8;HaplotypeScore=62.2066;InbreedingCoeff=0.9423;MQ=76.64;MQ0=1;MQRankSum=0.177;QD=21.11;ReadPosRankSum=-0.002;VQSLOD=4.9210;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:75:0,75,676	0/0:7,0:7:21.01:0,21,192	0/1:31,0:25:2.15:2,0,203	0/0:19,0:15:14.07:0,14,205	0/0:27,0:27:54:0,54,494	1/1:4,22:26:66.20:762,66,0	1/1:3,13:16:33.10:381,33,0	1/1:13,25:38:66.12:723,66,0	1/1:4,21:25:48.14:553,48,0	0/0:29,0:29:77.99:0,78,704	0/0:23,0:23:63.03:0,63,574	0/0:26,0:26:66.01:0,66,599	0/0:24,0:24:66.03:0,66,603	0/0:25,0:25:72.03:0,72,654	1/1:2,20:22:60.18:692,60,0	1/1:1,19:20:48.14:554,48,0	1/1:1,14:15:36.11:415,36,0	0/0:26,0:26:66.02:0,66,604	0/0:25,0:25:60.02:0,60,549	0/0:25,0:25:66.03:0,66,604	0/0:15,0:15:42.02:0,42,384	0/0:17,0:17:45.02:0,45,412	0/0:20,0:20:57.02:0,57,521	0/0:32,0:32:78.03:0,78,714	1/1:7,18:25:45.13:519,45,0	0/0:27,0:27:63.02:0,63,577	0/0:27,0:27:72.03:0,72,659	0/0:10,0:10:21.01:0,21,192
chr10	77950012	.	G	GGTGT	10181.44	PASS	AB=0.684;AC=39;AF=0.722;AN=54;BaseQRankSum=-5.974;DP=774;FS=1.636;HRun=0;HaplotypeScore=152.6331;InbreedingCoeff=0.6544;MQ=58.79;MQ0=17;MQRankSum=-0.165;QD=17.77;ReadPosRankSum=0.823;VQSLOD=4.8377;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:40:50.22:0,50,974	1/1:4,5:9:12.04:287,12,0	./.	0/0:34,0:11:0.05:0,0,1	1/1:16,10:30:20.81:437,21,0	1/1:11,10:27:31.50:496,31,0	1/1:12,19:39:45.36:1018,45,0	1/1:40,0:42:23.75:312,24,0	1/1:9,10:21:23.82:512,24,0	1/1:19,11:31:42.94:666,43,0	1/1:10,8:19:17.17:253,17,0	1/1:19,4:30:38.85:681,39,0	1/1:22,1:27:12.51:212,13,0	1/1:16,16:32:26.71:646,27,0	1/1:10,11:23:35.86:800,36,0	1/1:12,9:25:38.07:693,38,0	1/1:15,16:35:38.93:949,39,0	1/1:10,11:25:26.39:469,26,0	0/0:25,0:25:24.07:0,24,348	0/0:25,0:24:27.08:0,27,407	0/0:25,0:28:48.13:0,48,690	1/1:18,2:27:11.77:175,12,0	1/1:21,1:29:6.02:124,6,0	0/1:19,0:33:33.38:173,0,33	0/1:9,10:18:21.86:481,0,22	0/1:18,10:30:4.86:640,0,5	0/0:18,0:23:44.61:0,45,768	1/1:8,3:12:8.77:156,9,0
chr10	77951069	.	GC	G	12377.06	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=16.410;DP=770;FS=1.171;HRun=3;HaplotypeScore=81.1760;InbreedingCoeff=0.9794;MQ=77.62;MQ0=0;MQRankSum=-1.725;QD=32.66;ReadPosRankSum=2.966;VQSLOD=5.3091;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:99:0,138,1965	0/0:11,0:11:33.11:0,33,475	0/0:23,1:23:57.16:0,57,781	0/0:18,0:18:10.25:0,10,513	0/0:28,0:28:84.27:0,84,1186	1/1:0,27:27:75.24:929,75,0	1/1:0,25:25:69.22:855,69,0	1/1:0,33:33:99:1166,99,0	1/1:2,27:29:78.25:967,78,0	0/0:36,0:36:99:0,102,1434	0/0:24,0:24:69.21:0,69,972	1/1:0,24:24:66.21:818,66,0	1/1:0,31:31:81.25:1004,81,0	0/0:35,0:35:99:0,102,1448	1/1:2,41:43:99:1375,111,0	1/1:1,25:26:66.21:818,66,0	1/1:3,28:31:75.23:930,75,0	0/0:18,0:18:54.18:0,54,772	0/0:16,0:16:45.14:0,45,629	0/0:29,0:29:87.29:0,87,1243	0/0:33,0:33:99:0,99,1406	1/1:1,38:39:99:1358,111,0	1/1:1,20:21:45.14:558,45,0	1/1:3,26:29:75.23:930,75,0	1/1:1,20:21:54.17:669,54,0	0/0:33,0:33:99:0,99,1407	0/0:36,0:36:99:0,108,1550	0/0:2,0:2:6.02:0,6,85
chr10	77951937	.	C	CA	24183.31	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-11.780;DP=765;FS=0.396;HRun=4;HaplotypeScore=70.5424;InbreedingCoeff=0.9993;MQ=90.69;MQ0=0;MQRankSum=-7.414;QD=36.81;ReadPosRankSum=3.867;VQSLOD=4.7923;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:99:0,99,1123	1/1:0,8:8:24.08:328,24,0	0/0:26,0:26:69.03:0,69,746	0/0:33,0:33:60.36:0,60,916	1/1:1,37:38:96.32:1311,96,0	1/1:3,30:33:84.28:1149,84,0	1/1:0,17:17:48.16:657,48,0	1/1:2,28:30:84.27:1133,84,0	1/1:0,25:25:69.23:944,69,0	1/1:2,45:47:99:1858,138,0	1/1:1,14:15:42.05:532,42,0	1/1:2,31:33:90.30:1231,90,0	1/1:4,26:31:81.26:1093,81,0	1/1:2,29:31:78.26:1067,78,0	1/1:1,34:35:93.31:1272,93,0	1/1:0,19:19:54.18:739,54,0	1/1:1,15:16:42.14:575,42,0	0/0:14,0:14:39.11:0,39,442	1/1:2,25:27:75.21:1025,75,0	1/1:4,37:41:99:1532,114,0	1/1:0,29:29:84.28:1149,84,0	1/1:1,30:31:81.27:1107,81,0	1/1:3,22:25:63.20:847,63,0	1/1:3,17:20:45.15:616,45,0	1/1:2,23:25:60.20:821,60,0	1/1:2,37:39:99:1558,117,0	1/1:0,29:29:87.29:1189,87,0	1/1:0,13:13:33.11:451,33,0
chr10	77952343	.	AT	A	10618.10	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=14.203;DP=691;FS=2.386;HRun=4;HaplotypeScore=72.1765;InbreedingCoeff=0.9993;MQ=87.30;MQ0=0;MQRankSum=-3.212;QD=32.37;ReadPosRankSum=2.705;VQSLOD=5.6311;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:99:0,126,1741	0/0:7,0:7:21.07:0,21,293	0/0:26,0:26:67.76:0,68,886	0/0:22,0:22:63.15:0,63,807	0/0:29,0:29:87.28:0,87,1201	1/1:1,21:22:60.18:720,60,0	1/1:4,12:16:36.11:432,36,0	1/1:2,29:31:87.25:1031,87,0	1/1:0,21:21:63.19:756,63,0	0/0:23,0:23:66.22:0,66,910	0/0:20,0:20:60.20:0,60,840	1/1:0,22:22:57.17:684,57,0	1/1:4,29:33:42.23:930,42,0	0/0:24,0:24:72.24:0,72,1007	1/1:3,29:32:84.26:1008,84,0	1/1:2,24:26:72.22:864,72,0	1/1:1,22:23:63.19:756,63,0	0/0:19,0:19:57.19:0,57,798	0/0:21,0:21:57.17:0,57,767	0/0:32,0:32:93.30:0,93,1286	0/0:22,0:22:66.22:0,66,923	1/1:1,17:18:51.16:612,51,0	1/1:0,23:23:66.67:793,67,0	1/1:1,29:30:81.18:954,81,0	1/1:0,31:31:90.28:1080,90,0	0/0:36,0:36:99:0,105,1471	0/0:29,0:29:84.26:0,84,1157	0/0:9,0:9:27.09:0,27,378
chr10	77952419	.	C	CGA	1770.93	PASS	AB=0.938;AC=44;AF=0.846;AN=52;BaseQRankSum=2.017;DP=541;FS=8.736;HRun=0;HaplotypeScore=139.0798;InbreedingCoeff=0.1840;MQ=66.85;MQ0=4;MQRankSum=-0.136;QD=3.88;ReadPosRankSum=-1.333;VQSLOD=2.1732;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,8:30:27.33:120,0,27	1/1:9,0:9:0.47:1,0,0	./.	./.	0/1:15,0:15:0.15:55,0,0	1/1:21,0:20:16.87:125,17,0	1/1:18,0:17:5.90:39,6,0	1/1:28,0:28:15.47:77,15,0	0/1:15,0:13:0:0,0,0	1/1:22,0:22:0.83:64,1,0	1/1:21,0:21:13.80:166,14,0	0/0:21,0:20:1.93:0,2,6	1/1:18,0:17:11.06:64,11,0	1/1:21,0:21:11.95:91,12,0	0/0:13,0:12:0.38:0,0,0	1/1:22,0:20:6.30:40,6,0	1/1:20,0:20:7.35:57,7,0	1/1:15,0:17:23.95:168,24,0	1/1:16,0:14:14.48:109,14,0	0/1:17,0:17:11.53:13,0,12	1/1:13,0:13:5.97:47,6,0	1/1:18,0:18:18.15:119,18,0	1/1:15,0:15:6.83:52,7,0	1/1:16,0:16:6:52,6,0	1/1:24,0:24:2.92:18,3,0	1/1:26,0:26:26.62:209,27,0	1/1:22,0:22:5.31:136,5,0	1/1:12,0:12:5.99:49,6,0
chr10	77954853	.	C	CAT	8070.19	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-14.666;DP=552;FS=1.628;HRun=0;HaplotypeScore=62.8970;InbreedingCoeff=0.9498;MQ=64.64;MQ0=4;MQRankSum=-1.317;QD=34.34;ReadPosRankSum=0.722;VQSLOD=6.8813;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.28:0,93,1168	0/0:14,0:14:39.12:0,39,496	0/0:6,0:6:2.69:0,3,66	0/0:4,0:3:6:0,6,60	0/0:29,0:29:78.24:0,78,980	1/1:2,12:14:27.09:452,27,0	1/1:3,7:10:15.05:251,15,0	1/1:11,22:33:34.17:1069,34,0	1/1:4,8:12:24.08:400,24,0	0/0:27,0:27:69.22:0,69,878	0/0:25,0:25:69.20:0,69,854	1/1:4,15:19:12.98:757,13,0	1/1:6,15:21:54.18:874,54,0	0/0:14,0:14:39.12:0,39,496	1/1:3,13:16:33.11:552,33,0	1/1:4,18:24:51.17:853,51,0	1/1:3,14:17:36.12:602,36,0	0/0:26,0:25:69.22:0,69,875	0/0:12,0:12:27.09:0,27,344	0/0:26,0:26:68.88:0,69,864	0/0:17,0:16:39.12:0,39,496	1/1:1,10:11:24.07:401,24,0	1/1:3,19:21:42.14:703,42,0	1/1:1,6:8:12.04:201,12,0	1/1:4,22:27:57.19:954,57,0	0/0:33,0:32:84.27:0,84,1068	0/0:28,0:28:63.16:0,63,772	0/0:24,0:22:57.18:0,57,721
chr10	77954934	.	CAT	C	3753.90	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=3.805;DP=544;FS=10.703;HRun=0;HaplotypeScore=123.2481;InbreedingCoeff=0.8349;MQ=64.55;MQ0=6;MQRankSum=-2.901;QD=23.32;ReadPosRankSum=-1.106;VQSLOD=3.4652;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.23:0,66,1124	1/1:2,6:8:12.04:161,12,0	0/1:17,0:9:11.82:12,0,36	0/0:26,0:14:1.23:0,1,13	1/1:4,22:26:33.05:403,33,0	0/0:20,0:18:54.15:0,54,890	0/0:8,0:8:15.05:0,15,258	0/0:51,0:51:99:0,135,2192	0/0:7,0:7:18.06:0,18,310	1/1:7,20:27:78.26:1048,78,0	1/1:7,17:24:33.08:413,33,0	0/0:12,0:12:36.12:0,36,623	0/0:21,0:20:47.47:0,47,829	1/1:5,11:16:27.07:345,27,0	0/0:11,0:11:30.09:0,30,498	0/0:13,0:13:30.10:0,30,512	0/0:26,0:25:69.24:0,69,1177	0/0:22,0:21:51.17:0,51,868	0/0:15,0:14:42.13:0,42,684	0/0:28,0:28:81.26:0,81,1381	0/0:10,0:9:27.09:0,27,462	0/0:5,0:5:5.91:0,6,105	0/0:15,0:14:33.11:0,33,578	0/0:6,0:6:6:0,6,77	0/0:36,0:36:90.30:0,90,1538	1/1:7,17:23:66.20:860,66,0	0/0:27,0:27:75.24:0,75,1271	1/1:10,9:17:45.04:512,45,0
chr10	77954959	.	CAT	C	13861.17	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.504;DP=555;FS=0.000;HRun=0;HaplotypeScore=98.4793;InbreedingCoeff=0.8775;MQ=68.25;MQ0=6;MQRankSum=-0.599;QD=29.30;ReadPosRankSum=1.236;VQSLOD=5.8774;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:72.25:0,72,1204	1/1:1,6:7:18.06:229,18,0	0/0:21,0:11:8.47:0,8,96	0/0:32,0:18:6.97:0,7,170	1/1:5,23:28:48.13:609,48,0	1/1:2,17:18:48.15:611,48,0	1/1:0,6:6:12.04:153,12,0	1/1:9,39:48:99:1488,117,0	1/1:0,6:6:18.06:229,18,0	1/1:3,19:22:57.18:722,57,0	1/1:2,19:21:45.14:572,45,0	1/1:5,8:13:27.09:344,27,0	1/1:4,17:21:14.74:499,15,0	1/1:1,15:16:45.14:571,45,0	1/1:0,15:15:39.12:496,39,0	1/1:3,8:10:18.06:229,18,0	1/1:5,28:31:72.19:886,72,0	1/1:4,19:22:48.15:611,48,0	1/1:4,12:17:38.94:458,39,0	1/1:7,26:33:75.24:955,75,0	1/1:1,9:10:21.07:267,21,0	1/1:0,5:5:9.03:115,9,0	1/1:3,10:13:27.09:344,27,0	1/1:0,4:4:9.03:115,9,0	1/1:3,33:36:96.31:1222,96,0	1/1:3,22:24:66.21:838,66,0	1/1:3,24:27:66.21:840,66,0	1/1:2,12:14:36.12:458,36,0
chr10	77955405	.	C	CGT	804.08	PASS	AB=0.922;AC=24;AF=0.545;AN=44;BaseQRankSum=1.687;DP=605;FS=5.105;HRun=0;HaplotypeScore=110.7868;InbreedingCoeff=0.1985;MQ=68.34;MQ0=19;MQRankSum=-0.197;QD=2.17;ReadPosRankSum=-1.982;VQSLOD=1.8122;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:41:20.53:21,0,102	./.	./.	./.	0/0:12,0:12:2.97:0,3,21	./.	1/1:25,0:25:6:52,6,0	1/1:29,0:28:13.17:100,13,0	1/1:16,0:16:5.90:38,6,0	0/0:26,0:26:4.97:0,5,44	./.	1/1:12,0:21:8.89:79,9,0	0/1:25,0:26:29.54:30,0,96	0/1:19,0:21:6.28:6,0,107	1/1:31,1:35:8.59:74,9,0	1/1:15,0:15:3:26,3,0	1/1:31,0:31:11.81:103,12,0	1/1:22,0:20:9:79,9,0	./.	0/0:15,0:15:6.01:0,6,64	0/0:46,0:47:2.42:0,2,14	0/0:8,0:7:6.02:0,6,65	0/1:8,0:11:20.50:20,0,26	0/1:21,10:32:8.17:286,0,8	1/1:15,0:12:3:25,3,0	0/1:25,0:25:14.97:15,0,26	0/0:21,0:21:11.79:0,12,111	0/0:4,0:4:6.01:0,6,64
chr10	77955473	.	C	CTG	3632.93	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-11.435;DP=572;FS=1.536;HRun=0;HaplotypeScore=97.9178;InbreedingCoeff=0.9971;MQ=90.92;MQ0=3;MQRankSum=0.904;QD=39.06;ReadPosRankSum=0.647;VQSLOD=5.2193;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1382	0/0:10,0:10:29.96:0,30,349	0/0:21,0:17:45.02:0,45,510	0/0:51,0:47:99:0,114,1428	0/0:18,0:18:51.15:0,51,648	0/0:16,0:16:45.10:0,45,566	0/0:18,0:18:41.98:0,42,506	0/0:29,0:29:69.22:0,69,897	0/0:14,0:14:32.96:0,33,387	0/0:14,0:14:33.11:0,33,429	0/0:12,0:12:36.12:0,36,468	0/0:17,0:17:36.12:0,36,468	0/0:16,0:16:42.06:0,42,512	0/0:29,0:29:75.07:0,75,937	0/0:22,0:22:54.07:0,54,628	0/0:14,0:14:42.14:0,42,546	0/0:19,0:19:48.11:0,48,605	0/0:20,0:20:54.18:0,54,701	1/1:2,12:15:39.04:575,39,0	1/1:3,15:18:45.15:765,45,0	1/1:3,40:43:96.33:1632,96,0	0/0:17,0:17:45.08:0,45,551	0/0:7,0:7:18.04:0,18,219	0/0:31,0:31:78.24:0,78,1001	0/0:11,0:11:33.11:0,33,429	0/0:24,0:24:63.15:0,63,783	1/1:3,13:16:39.13:661,39,0	0/0:11,0:11:30.09:0,30,376
chr10	77955752	.	GA	G	3220.51	PASS	AB=0.990;AC=42;AF=0.750;AN=56;BaseQRankSum=8.447;DP=481;FS=11.459;HRun=1;HaplotypeScore=116.4145;InbreedingCoeff=0.2815;MQ=63.03;MQ0=0;MQRankSum=-5.438;QD=7.35;ReadPosRankSum=4.031;VQSLOD=-0.1004;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.16:0,78,1041	0/1:2,0:2:1.79:2,0,17	0/0:8,0:7:18.06:0,18,244	0/0:8,0:8:18.72:0,19,261	1/1:13,0:13:20.60:61,21,0	1/1:16,1:17:14.79:138,15,0	1/1:25,2:27:58.31:393,58,0	1/1:13,0:13:15.07:106,15,0	1/1:21,0:21:40.09:240,40,0	0/1:21,1:22:17.48:49,0,17	0/1:11,0:11:5.77:59,0,6	1/1:7,11:18:47.50:358,48,0	1/1:5,7:12:29.62:237,30,0	0/1:23,0:23:56.96:57,0,58	1/1:21,0:21:38.67:263,39,0	1/1:27,2:29:44.14:314,44,0	1/1:26,3:29:45.07:298,45,0	0/1:29,0:28:7.42:48,0,7	1/1:12,0:12:1.44:13,1,0	1/1:6,0:6:8.93:26,9,0	0/1:34,0:33:18.40:83,0,18	1/1:5,1:6:3.01:38,3,0	1/1:3,1:4:5.84:41,6,0	1/1:10,10:20:41.75:327,42,0	1/1:14,0:14:21.13:109,21,0	0/1:26,1:27:26.52:27,0,78	1/1:25,0:25:35.09:101,35,0	0/1:3,0:3:3.41:3,0,14
chr10	77955753	.	AG	A	4886.55	PASS	AB=0.989;AC=31;AF=0.554;AN=56;BaseQRankSum=-8.237;DP=480;FS=9.410;HRun=8;HaplotypeScore=109.7476;InbreedingCoeff=0.6788;MQ=62.85;MQ0=0;MQRankSum=7.100;QD=16.79;ReadPosRankSum=1.631;VQSLOD=3.8988;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.19:0,69,816	1/1:1,1:2:3:29,3,0	0/0:8,0:7:18.04:0,18,198	0/0:8,0:8:15.74:0,16,210	1/1:1,12:13:33.05:319,33,0	0/0:17,0:17:22.85:0,23,113	0/0:28,0:28:5.66:0,6,64	0/0:13,0:13:14.19:0,14,67	0/0:21,0:20:19.12:0,19,53	1/1:2,20:22:63.07:600,63,0	1/1:2,9:11:24.03:230,24,0	0/1:16,0:16:3.87:26,0,4	1/1:13,0:13:3.97:25,4,0	1/1:3,19:22:50.95:492,51,0	0/0:20,0:20:26.95:0,27,103	0/0:29,0:29:29.71:0,30,159	0/1:27,1:28:10.27:10,0,71	1/1:2,26:28:69.11:666,69,0	1/1:1,12:13:35.99:327,36,0	1/1:0,6:6:15:137,15,0	1/1:3,31:34:81.13:782,81,0	1/1:7,0:7:2.68:11,3,0	0/0:4,0:4:1.55:0,2,4	0/1:20,0:20:14.81:15,0,16	0/0:14,0:14:13.16:0,13,55	1/1:6,21:27:60.09:579,60,0	1/1:0,25:25:60.10:579,60,0	1/1:2,2:4:6:58,6,0
chr10	77955761	.	GCGGC	G	6692.79	PASS	AB=0.543;AC=23;AF=0.411;AN=56;BaseQRankSum=12.642;DP=498;FS=5.335;HRun=0;HaplotypeScore=127.5628;InbreedingCoeff=0.8746;MQ=66.79;MQ0=0;MQRankSum=-14.079;QD=29.23;ReadPosRankSum=-1.526;VQSLOD=3.9224;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.29:0,90,2132	0/0:1,0:1:3.01:0,3,56	0/0:11,0:10:29.83:0,30,517	0/0:9,0:9:24.01:0,24,483	0/0:12,0:12:33.11:0,33,632	1/1:4,15:19:27.09:515,27,0	1/1:3,22:26:39.04:671,39,0	1/1:1,16:17:48.03:638,48,0	1/1:1,18:18:32.57:612,33,0	0/0:23,0:23:69.24:0,69,1299	0/0:11,0:11:26.12:0,26,424	1/1:7,1:19:47.33:518,47,0	1/1:7,1:14:17.39:258,17,0	0/0:20,0:20:54.17:0,54,992	1/1:1,18:20:39.13:768,39,0	1/1:3,26:32:63.20:1138,63,0	0/1:4,20:25:2.13:782,0,2	0/0:28,0:27:75.26:0,75,1448	0/0:16,0:16:38.64:0,39,695	0/0:8,0:8:21.02:0,21,311	0/0:36,0:35:96.33:0,96,1810	0/0:1,0:7:2.68:0,3,11	1/1:1,2:3:3.01:59,3,0	1/1:11,0:21:41.36:441,41,0	1/1:1,13:14:15.05:293,15,0	0/0:26,0:26:71.91:0,72,1338	0/0:25,0:25:60.16:0,60,1057	0/0:5,0:5:15.05:0,15,279
chr10	77955764	.	GC	G	2005.21	PASS	AC=24;AF=0.444;AN=54;BaseQRankSum=14.799;DP=487;FS=1.729;HRun=4;HaplotypeScore=113.7206;InbreedingCoeff=0.9297;MQ=71.49;MQ0=0;MQRankSum=-12.580;QD=9.28;ReadPosRankSum=-1.372;VQSLOD=0.3547;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.28:0,90,1223	0/0:1,0:1:3.01:0,3,38	0/0:12,0:11:20.81:0,21,332	0/0:11,0:11:23.20:0,23,310	0/0:13,0:13:36.10:0,36,435	1/1:15,0:15:21.51:103,22,0	1/1:23,0:23:36.81:196,37,0	1/1:16,0:16:38.61:266,39,0	1/1:19,0:18:30.72:154,31,0	0/0:25,0:25:75.15:0,75,937	0/0:11,0:11:16.32:0,16,299	1/1:13,8:21:53.32:387,53,0	1/1:12,3:15:26.52:179,27,0	0/0:19,0:19:53.98:0,54,659	1/1:19,0:19:36.63:176,37,0	1/1:27,2:29:45.06:288,45,0	1/1:22,0:22:7.85:148,8,0	0/0:28,0:27:75.24:0,75,972	0/0:13,0:13:34.49:0,34,473	0/0:7,0:7:21.02:0,21,228	0/0:38,0:37:99:0,105,1245	./.	1/1:3,0:3:2.80:13,3,0	1/1:12,9:21:34.70:249,35,0	1/1:13,0:13:13.56:62,14,0	0/0:28,0:28:77.97:0,78,971	0/0:23,0:23:57.10:0,57,645	0/0:5,0:5:15.05:0,15,193
chr10	77956150	.	TA	T	8965.58	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=14.277;DP=560;FS=1.606;HRun=9;HaplotypeScore=92.5558;InbreedingCoeff=0.9876;MQ=60.31;MQ0=0;MQRankSum=-1.446;QD=22.99;ReadPosRankSum=2.617;VQSLOD=5.3968;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:87.03:0,87,971	1/1:0,2:4:10.08:67,10,0	0/0:14,0:10:18.05:0,18,207	0/0:9,0:9:23.60:0,24,218	1/1:4,22:26:60.02:549,60,0	1/1:1,30:31:84.05:769,84,0	1/1:3,21:24:63.03:577,63,0	1/1:3,23:26:69.03:631,69,0	1/1:1,14:15:36.02:329,36,0	1/1:1,29:31:83.07:747,83,0	1/1:3,13:16:39.02:357,39,0	1/1:3,16:19:48.02:439,48,0	1/1:3,18:21:48.01:435,48,0	1/1:3,19:22:48.02:439,48,0	1/1:3,18:21:51.02:467,51,0	1/1:0,13:13:33.02:302,33,0	1/1:2,21:23:39.21:501,39,0	0/0:18,0:18:51.15:0,51,588	0/0:24,0:23:66.15:0,66,731	0/0:19,0:19:54.16:0,54,621	0/0:31,0:31:78.21:0,78,883	1/1:1,14:15:39.02:357,39,0	1/1:0,14:14:35.83:329,36,0	1/1:0,5:5:15.01:137,15,0	1/1:0,22:22:63.03:577,63,0	1/1:7,25:32:75.03:683,75,0	0/0:20,0:20:57.17:0,57,657	1/1:0,10:10:30.02:275,30,0
chr10	77956320	.	G	GAC	3180.66	PASS	AB=0.775;AC=38;AF=0.731;AN=52;BaseQRankSum=-0.680;DP=530;FS=2.514;HRun=0;HaplotypeScore=86.5209;InbreedingCoeff=-0.4452;MQ=55.73;MQ0=13;MQRankSum=-3.037;QD=6.27;ReadPosRankSum=0.929;VQSLOD=3.2447;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:35,1:39:27.20:27,0,303	1/1:7,0:6:5.49:27,5,0	./.	./.	1/1:19,0:19:8.75:79,9,0	0/1:15,6:21:36:36,0,53	0/1:17,12:31:61.93:117,0,62	0/1:20,0:20:10.62:73,0,11	0/1:7,6:14:23.93:81,0,24	1/1:18,0:17:17.09:160,17,0	1/1:18,0:16:5.99:49,6,0	0/1:10,15:26:8.87:270,0,9	0/1:8,5:14:13.27:204,0,13	1/1:14,0:23:17.07:76,17,0	1/1:3,5:8:12.04:180,12,0	1/1:4,0:4:6.02:89,6,0	0/1:19,12:32:99:248,0,122	1/1:9,1:18:9.01:97,9,0	0/1:15,4:19:23.93:81,0,24	0/1:19,0:19:17.94:158,0,18	0/1:36,14:54:53.66:361,0,54	1/1:8,4:12:2.86:45,3,0	0/1:7,2:10:26.92:39,0,27	1/1:9,18:28:0.17:415,0,0	0/1:8,9:17:17.89:165,0,18	1/1:9,0:9:3.01:34,3,0	0/1:9,6:15:47.83:162,0,48	1/1:5,0:7:6:52,6,0
chr10	77958192	.	CA	C	19901.77	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=13.342;DP=793;FS=0.000;HRun=1;HaplotypeScore=95.5464;InbreedingCoeff=1.0000;MQ=86.17;MQ0=0;MQRankSum=-1.866;QD=39.41;ReadPosRankSum=3.731;VQSLOD=5.1175;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1660	0/0:20,0:20:57.19:0,57,909	0/0:30,0:30:84.74:0,85,1270	0/0:22,0:22:50.84:0,51,785	0/0:19,0:19:54.18:0,54,861	1/1:0,23:23:63.21:881,63,0	1/1:0,31:31:87.29:1217,87,0	1/1:0,22:22:66.21:906,66,0	1/1:0,40:40:99:1636,117,0	0/0:34,0:34:99:0,99,1500	0/0:23,0:23:60.19:0,60,935	1/1:0,32:32:90.30:1257,90,0	1/1:1,38:39:99:1461,105,0	0/0:34,1:35:63.40:0,63,1573	1/1:0,24:24:66.22:923,66,0	1/1:0,27:27:72.24:1007,72,0	1/1:0,18:18:48.16:671,48,0	0/0:16,0:16:48.16:0,48,764	1/1:0,18:18:54.17:738,54,0	1/1:0,26:26:78.16:1035,78,0	1/1:9,40:49:99:1923,147,0	1/1:0,31:31:81.27:1132,81,0	1/1:0,27:27:78.26:1089,78,0	1/1:0,31:31:93.31:1301,93,0	1/1:0,31:31:90.30:1258,90,0	0/0:33,0:33:99:0,99,1559	1/1:0,36:36:99:1468,105,0	0/0:21,0:21:63.21:0,63,1006
chr10	77958557	.	G	GCATTC	57653.11	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-11.023;DP=819;FS=1.890;HRun=0;HaplotypeScore=117.2460;InbreedingCoeff=0.9999;MQ=77.13;MQ0=0;MQRankSum=-11.847;QD=79.19;ReadPosRankSum=3.152;VQSLOD=7.1332;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,2730	1/1:0,12:16:36.12:1197,36,0	0/0:28,0:28:78.21:0,78,1594	0/0:22,0:22:63.19:0,63,1391	1/1:4,19:26:54.01:1626,54,0	1/1:1,22:26:66.23:2193,66,0	1/1:4,19:28:66.23:2186,66,0	1/1:6,20:35:99:2825,99,0	1/1:2,19:25:63.22:2092,63,0	1/1:5,31:43:99:3612,117,0	1/1:3,23:29:78.27:2494,78,0	1/1:1,15:20:48.16:1590,48,0	1/1:3,25:31:81.28:2629,81,0	1/1:3,29:37:87.03:2808,87,0	1/1:6,25:35:90.31:2858,90,0	1/1:4,21:27:69.22:2233,69,0	1/1:1,31:36:78.11:2431,78,0	1/1:3,14:19:48.16:1549,48,0	1/1:1,18:24:66.23:2057,66,0	1/1:4,21:29:75.20:2341,75,0	1/1:2,22:27:60.20:1867,60,0	1/1:4,23:30:78.27:2573,78,0	1/1:2,14:17:48.16:1508,48,0	1/1:2,26:34:69.24:2252,69,0	1/1:2,23:31:66.23:2186,66,0	1/1:9,28:42:99:3259,114,0	1/1:1,31:36:96.21:3192,96,0	1/1:0,21:25:63.22:2096,63,0
chr10	77958827	.	C	CT	3854.68	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-11.106;DP=834;FS=2.245;HRun=6;HaplotypeScore=79.3612;InbreedingCoeff=0.9997;MQ=88.11;MQ0=0;MQRankSum=-0.675;QD=32.39;ReadPosRankSum=-0.680;VQSLOD=3.6482;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,165,1657	0/0:13,0:13:36.08:0,36,367	0/0:26,0:26:57.06:0,57,569	0/0:35,0:35:88.40:0,88,840	0/0:25,0:25:63.14:0,63,643	0/0:13,0:13:30.07:0,30,306	0/0:32,0:32:90.20:0,90,918	0/0:34,0:34:90.19:0,90,912	0/0:36,0:36:99:0,105,1063	0/0:38,0:38:99:0,102,1036	0/0:18,0:18:48.11:0,48,490	0/0:33,0:33:93.18:0,93,935	0/0:30,0:30:84.19:0,84,857	0/0:27,0:27:69.15:0,69,704	0/0:41,0:41:99:0,114,1163	0/0:38,0:38:99:0,111,1119	0/0:29,0:29:69.15:0,69,704	0/0:13,0:13:33.07:0,33,337	1/1:4,22:26:66.21:830,66,0	1/1:4,20:25:63.19:773,63,0	1/1:5,29:33:87.27:1081,87,0	0/0:27,0:27:81.18:0,81,826	0/0:30,0:30:87.20:0,87,887	0/0:39,0:39:99:0,114,1163	0/0:33,0:33:87.19:0,87,888	0/0:33,0:33:90.20:0,90,918	1/1:2,32:34:93.30:1170,93,0	0/0:15,0:15:45.10:0,45,459
chr10	77958966	.	C	CAG	33819.71	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-14.150;DP=784;FS=10.368;HRun=0;HaplotypeScore=82.2086;InbreedingCoeff=0.9994;MQ=85.94;MQ0=2;MQRankSum=-6.854;QD=50.40;ReadPosRankSum=4.165;VQSLOD=5.5069;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,175,2559	1/1:0,12:12:33.11:618,33,0	0/0:29,0:29:78.72:0,79,1100	0/0:25,0:25:38.42:0,38,872	1/1:0,22:23:63.22:1180,63,0	1/1:0,14:14:42.14:787,42,0	1/1:4,29:34:75.26:1389,75,0	1/1:4,38:43:99:2113,117,0	1/1:0,34:34:96.33:1798,96,0	1/1:0,26:26:78.27:1449,78,0	1/1:1,14:15:39.13:730,39,0	1/1:0,25:25:66.23:1236,66,0	1/1:2,24:26:66.23:1236,66,0	1/1:1,39:39:99:2135,114,0	1/1:5,34:39:93.32:1742,93,0	1/1:1,31:34:93.32:1727,93,0	1/1:0,24:23:69.24:1293,69,0	1/1:1,20:21:51.17:955,51,0	1/1:2,11:14:36.07:641,36,0	1/1:0,21:21:60.21:1123,60,0	1/1:0,35:34:99:1854,99,0	1/1:0,28:28:78.27:1461,78,0	1/1:0,31:31:84.13:1573,84,0	1/1:0,37:37:99:1910,102,0	1/1:0,23:23:60.21:1123,60,0	1/1:1,36:37:99:1950,108,0	1/1:1,24:25:69.24:1291,69,0	1/1:1,9:10:27.09:506,27,0
chr10	77959413	.	C	CA	15372.26	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-16.748;DP=739;FS=2.973;HRun=7;HaplotypeScore=67.9048;InbreedingCoeff=0.9979;MQ=85.11;MQ0=0;MQRankSum=-3.256;QD=30.99;ReadPosRankSum=0.547;VQSLOD=5.2061;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1088	1/1:1,6:7:18.06:217,18,0	0/0:31,0:31:19.95:0,20,537	0/0:27,0:27:45.64:0,46,477	1/1:3,26:29:72.15:838,72,0	1/1:2,23:25:63.19:761,63,0	1/1:3,24:27:69.21:834,69,0	1/1:4,31:35:90.23:1051,90,0	1/1:1,32:33:81.25:979,81,0	1/1:3,21:24:63.19:761,63,0	1/1:2,13:15:39.12:471,39,0	0/0:28,0:28:78.11:0,78,747	0/0:21,0:21:57.09:0,57,549	1/1:1,24:25:72.22:869,72,0	1/1:2,20:22:57.17:689,57,0	1/1:2,22:24:60.18:725,60,0	1/1:2,20:22:34.22:696,34,0	0/0:18,0:18:51.04:0,51,484	1/1:3,17:20:51.15:607,51,0	1/1:3,25:28:75.23:906,75,0	1/1:4,31:35:60.08:988,60,0	0/0:28,0:28:69.09:0,69,661	0/0:23,0:23:60.09:0,60,579	0/0:29,0:29:81.12:0,81,782	1/1:4,27:31:78.24:942,78,0	1/1:4,40:44:99:1445,123,0	1/1:2,34:37:92.95:1123,93,0	1/1:0,13:13:39.12:471,39,0
chr10	77960139	.	A	ACTT	10832.02	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.420;DP=551;FS=69.561;HRun=0;HaplotypeScore=96.6598;InbreedingCoeff=0.9279;MQ=76.30;MQ0=5;MQRankSum=-5.466;QD=23.60;ReadPosRankSum=2.577;VQSLOD=2.1180;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:84.27:0,84,1224	1/1:2,6:8:17.89:274,18,0	0/0:27,0:22:16.27:0,16,288	0/0:31,0:25:42.17:0,42,508	1/1:3,17:21:38.89:658,39,0	1/1:27,0:23:36.11:465,36,0	1/1:15,0:15:24:277,24,0	1/1:32,0:30:58.51:564,59,0	1/1:13,0:13:15.05:192,15,0	1/1:3,23:26:60.15:1056,60,0	1/1:3,12:16:33.07:631,33,0	1/1:13,0:12:18.06:231,18,0	1/1:22,0:22:36.12:463,36,0	1/1:0,6:6:15.05:298,15,0	1/1:20,0:20:24.08:303,24,0	1/1:11,0:12:30.10:388,30,0	1/1:25,0:24:54.11:673,54,0	1/1:23,0:19:24.74:273,25,0	1/1:11,0:24:40.75:409,41,0	1/1:2,0:17:35.81:365,36,0	1/1:1,0:10:6.02:75,6,0	1/1:12,0:12:18.06:229,18,0	1/1:19,0:19:36.03:443,36,0	1/1:21,0:20:30.06:385,30,0	1/1:12,0:13:18.06:233,18,0	1/1:6,26:31:75.22:1398,75,0	1/1:6,1:18:15.05:194,15,0	1/1:4,10:14:18.06:353,18,0
chr10	77960150	.	T	TTCTTC	14215.42	PASS	AB=0.942;AC=41;AF=0.732;AN=56;BaseQRankSum=-3.819;DP=525;FS=66.864;HRun=0;HaplotypeScore=90.8789;InbreedingCoeff=0.1724;MQ=68.89;MQ0=13;MQRankSum=-6.334;QD=32.31;ReadPosRankSum=7.408;VQSLOD=1.8796;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.30:0,93,1936	1/1:6,0:6:12.57:72,13,0	0/0:23,0:17:25.01:0,25,448	0/0:31,0:22:46.97:0,47,798	1/1:16,0:16:10.24:194,10,0	1/1:3,22:22:36.12:1084,36,0	0/1:2,12:17:9.01:556,0,9	1/1:0,26:26:78.23:1728,78,0	1/1:1,11:14:15.04:451,15,0	0/1:29,0:29:99:210,0,126	0/1:15,0:15:41.61:116,0,42	1/1:1,10:10:18.06:540,18,0	1/1:1,17:20:36.11:1080,36,0	1/1:6,0:6:14.17:70,14,0	1/1:0,21:23:24.08:716,24,0	1/1:2,9:11:30.10:880,30,0	1/1:2,22:26:54.18:1570,54,0	1/1:2,0:17:8.08:93,8,0	0/1:17,0:17:99:624,0,114	0/1:14,0:14:29.27:458,0,29	0/1:10,0:10:7.72:161,0,8	1/1:0,9:10:18.06:539,18,0	1/1:3,14:17:36.04:1014,36,0	1/1:4,16:19:29.97:865,30,0	1/1:1,12:12:18.06:519,18,0	0/1:31,0:30:57.13:294,0,57	0/1:16,0:16:45.03:324,0,45	0/1:16,0:15:44.15:56,0,44
chr10	77960312	.	CTCTTCTTCT	C	414.30	PASS	AB=1.000;AC=8;AF=0.222;AN=36;BaseQRankSum=0.372;DP=437;FS=5.153;HRun=0;HaplotypeScore=54.2679;InbreedingCoeff=0.2241;MQ=21.53;MQ0=197;MQRankSum=1.245;QD=3.26;ReadPosRankSum=0.731;VQSLOD=0.9120;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:9:11.42:17,0,11	./.	./.	./.	0/1:23,0:15:3.76:4,0,56	0/0:23,0:13:15.05:0,15,227	0/0:33,0:8:0.47:0,0,1	./.	0/0:5,0:3:6.02:0,6,113	0/1:27,0:7:59.58:72,0,60	0/0:9,0:11:0.47:0,0,1	./.	./.	0/0:11,0:2:0:0,0,0	0/0:12,0:5:6.02:0,6,111	0/1:11,0:6:12.49:12,0,136	./.	./.	./.	0/0:10,0:5:3.01:0,3,35	0/0:45,0:11:0:0,0,0	0/0:13,0:6:5.89:0,6,69	0/0:18,0:11:6.02:0,6,102	0/0:33,0:10:10.28:0,10,142	0/0:14,0:10:12.03:0,12,234	1/1:15,4:10:12.04:235,12,0	./.	1/1:22,0:13:10.28:184,10,0
chr10	77960620	.	T	TC	2112.25	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.494;DP=389;FS=1.805;HRun=3;HaplotypeScore=51.6158;InbreedingCoeff=0.9568;MQ=48.44;MQ0=30;MQRankSum=-0.884;QD=28.54;ReadPosRankSum=0.746;VQSLOD=2.7706;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:11:27.08:0,27,324	0/0:4,0:4:12.04:0,12,144	0/0:35,0:7:11.97:0,12,127	0/0:33,0:5:10.10:0,10,90	0/0:15,0:14:33.02:0,33,366	0/0:10,0:9:18.06:0,18,216	0/0:12,0:10:30.09:0,30,358	0/0:14,0:12:33.09:0,33,382	0/0:13,0:13:27.08:0,27,324	0/0:13,0:13:36.11:0,36,432	0/0:6,0:6:15.05:0,15,180	1/1:0,7:8:24.05:316,24,0	1/1:0,17:16:39.13:546,39,0	0/0:15,0:15:33.10:0,33,396	0/0:12,0:12:33.10:0,33,396	0/0:22,0:22:51.16:0,51,612	0/0:12,0:10:21.23:0,21,283	0/0:11,0:11:27.08:0,27,322	0/0:7,0:7:18.05:0,18,216	0/0:17,0:16:39.12:0,39,468	0/0:10,0:10:23.92:0,24,251	1/1:0,10:10:27.09:377,27,0	1/1:1,14:12:27.09:377,27,0	1/1:3,21:21:48.16:671,48,0	0/0:7,0:7:21.06:0,21,251	0/0:12,0:12:36.11:0,36,432	0/0:16,0:16:48.13:0,48,563	0/0:4,0:4:12.04:0,12,144
chr10	77960918	.	G	GTGCTGGTTAT	11709.03	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-7.554;DP=747;FS=0.843;HRun=0;HaplotypeScore=212.0741;InbreedingCoeff=0.9994;MQ=84.34;MQ0=0;MQRankSum=-15.114;QD=81.88;ReadPosRankSum=-1.087;VQSLOD=4.6741;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,3328	0/0:11,0:11:33.11:0,33,1058	0/0:25,0:25:72.21:0,72,1969	0/0:26,0:26:65.93:0,66,1661	0/0:30,0:30:81.16:0,81,2443	0/0:27,0:27:75.23:0,75,2236	0/0:24,0:24:69.24:0,69,2197	0/0:35,0:35:96.31:0,96,2911	0/0:38,0:38:99:0,105,3306	0/0:31,0:31:81.28:0,81,2663	0/0:16,0:16:36.11:0,36,1112	1/1:8,18:32:63.22:3003,63,0	1/1:2,17:31:57.15:2786,57,0	0/0:22,0:22:60.21:0,60,1973	0/0:32,0:32:90.26:0,90,2711	0/0:26,0:26:75.26:0,75,2392	0/0:27,0:27:64.38:0,64,2267	0/0:20,0:20:54.04:0,54,1622	0/0:21,0:21:57.02:0,57,1590	0/0:17,0:17:45.15:0,45,1447	0/0:41,0:41:99:0,120,3954	1/1:5,17:27:66.18:2783,66,0	1/1:7,12:27:54.48:1833,54,0	1/1:7,15:26:39.09:1305,39,0	0/0:18,0:17:45.11:0,45,1404	0/0:31,0:31:90.28:0,90,2627	0/0:39,0:39:99:0,114,3550	0/0:8,0:8:24.08:0,24,757
chr10	77963968	.	CCT	C	334.73	PASS	AB=0.936;AC=19;AF=0.396;AN=48;BaseQRankSum=0.343;DP=517;FS=1.167;HRun=0;HaplotypeScore=78.7297;InbreedingCoeff=-0.0688;MQ=74.87;MQ0=39;MQRankSum=2.070;QD=1.66;ReadPosRankSum=1.301;VQSLOD=1.3669;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:38.80:39,0,296	0/1:5,0:4:22.73:27,0,23	./.	0/0:102,0:37:0:0,0,0	./.	0/1:13,1:14:31.53:32,0,36	0/1:16,3:17:48.60:49,0,109	0/0:21,0:19:3.01:0,3,36	1/1:12,1:13:2.75:32,3,0	0/0:18,0:16:8.30:0,8,56	0/0:5,0:5:3.01:0,3,42	0/1:10,5:15:29.12:59,0,29	1/1:7,4:11:3.01:33,3,0	0/0:9,0:7:8.93:0,9,74	0/1:15,1:15:14.66:15,0,205	0/1:20,0:19:13.16:13,0,101	0/1:14,1:13:45.35:45,0,122	1/1:12,0:10:4.77:18,5,0	0/0:19,0:19:2.97:0,3,20	0/0:2,0:1:0.47:0,0,1	0/0:20,0:19:0.83:0,1,2	1/1:9,0:8:5.38:41,5,0	0/0:7,0:7:3.01:0,3,44	1/1:15,1:15:5.96:52,6,0	0/0:14,0:13:9.03:0,9,123	./.	0/1:11,0:11:6.41:15,0,6	./.
chr10	77964031	.	CTCT	C	548.82	PASS	AB=0.855;AC=7;AF=0.140;AN=50;BaseQRankSum=2.325;DP=449;FS=0.000;HRun=0;HaplotypeScore=64.0724;InbreedingCoeff=-0.0125;MQ=29.32;MQ0=146;MQRankSum=-3.214;QD=7.73;ReadPosRankSum=3.030;VQSLOD=2.2616;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:16:32.92:0,33,517	0/0:6,0:4:9.50:0,10,132	./.	./.	./.	0/1:5,3:7:11.79:44,0,12	0/1:13,5:12:99:158,0,122	1/1:3,1:2:2.74:12,3,0	0/0:11,0:6:5.99:0,6,58	0/0:15,0:9:23.79:0,24,261	0/0:10,0:6:4.26:0,4,55	0/0:21,0:20:48.13:0,48,831	0/0:14,0:10:18.06:0,18,333	0/0:9,0:7:15.04:0,15,250	0/1:13,2:13:89.11:89,0,89	0/1:11,0:10:78.11:108,0,78	0/1:13,2:12:53.39:257,0,53	0/0:14,0:13:33.56:0,34,593	0/0:23,0:8:13.31:0,13,142	0/0:12,0:6:11.99:0,12,171	0/0:30,0:22:16.51:0,17,166	0/0:12,0:4:3.01:0,3,47	0/0:18,0:12:9.03:0,9,154	0/0:20,0:16:21.96:0,22,416	0/0:10,1:7:3.01:0,3,49	0/0:15,0:6:15.26:0,15,112	0/0:13,0:10:17.95:0,18,285	0/0:3,0:2:3.01:0,3,51
chr10	77964037	.	CTCT	C	622.79	PASS	AC=12;AF=0.261;AN=46;BaseQRankSum=5.853;DP=435;FS=6.864;HRun=0;HaplotypeScore=59.5634;InbreedingCoeff=0.7496;MQ=29.13;MQ0=148;MQRankSum=-3.943;QD=10.04;ReadPosRankSum=2.001;VQSLOD=2.0719;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:12:30.10:0,30,632	0/0:5,0:3:9.03:0,9,182	./.	./.	./.	1/1:5,1:5:1.58:49,2,0	1/1:15,1:12:23.43:207,23,0	1/1:4,0:2:2.74:12,3,0	./.	0/0:13,0:6:18.06:0,18,308	0/0:9,0:5:5.05:0,5,76	0/0:21,0:20:51.17:0,51,1045	0/0:13,0:9:17.73:0,18,333	0/0:10,0:8:17.42:0,17,322	1/1:8,1:11:9.33:114,9,0	1/1:3,4:7:14.49:183,14,0	1/1:16,0:13:28.51:212,29,0	0/0:16,0:15:42.14:0,42,883	0/0:28,0:8:20.98:0,21,278	0/0:15,0:9:16.86:0,17,298	0/0:31,0:22:13.84:0,14,235	0/0:10,0:4:3.01:0,3,62	0/0:18,0:11:9.03:0,9,182	0/0:22,0:18:28.45:0,28,542	./.	0/0:12,0:3:9.03:0,9,146	0/0:12,0:9:16.13:0,16,290	0/0:2,0:1:3.01:0,3,50
chr10	77964043	.	CTCT	C	1199.32	PASS	AB=0.853;AC=14;AF=0.259;AN=54;BaseQRankSum=3.374;DP=468;FS=12.067;HRun=0;HaplotypeScore=56.1933;InbreedingCoeff=0.6022;MQ=31.49;MQ0=154;MQRankSum=-3.008;QD=11.76;ReadPosRankSum=-3.114;VQSLOD=0.8972;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:15:39.13:0,39,765	0/0:6,0:3:9.03:0,9,180	0/0:45,0:2:3.01:0,3,46	0/0:51,0:1:2.37:0,2,8	./.	0/1:10,1:9:22.51:91,0,23	1/1:10,9:15:20.32:278,20,0	1/1:9,0:7:5.51:84,6,0	1/1:6,1:4:5.77:32,6,0	0/0:12,0:5:15.01:0,15,280	0/0:8,0:4:5.98:0,6,90	0/0:21,0:20:51.16:0,51,1003	0/0:14,0:8:15.05:0,15,322	0/0:11,0:9:21.07:0,21,407	1/1:14,2:14:22.60:242,23,0	1/1:4,3:7:17.58:225,18,0	0/1:11,4:13:40.11:324,0,40	0/0:16,0:15:42.14:0,42,887	0/0:32,0:9:24.08:0,24,418	0/0:13,0:9:17.89:0,18,307	0/0:30,0:20:19.86:0,20,332	0/0:9,0:3:3.01:0,3,62	0/0:20,0:11:9.03:0,9,179	0/0:22,0:18:31.05:0,31,589	1/1:16,2:12:14.69:95,15,0	0/0:13,0:4:12.04:0,12,210	0/0:12,0:9:21:0,21,367	0/0:2,0:1:3.01:0,3,44
chr10	77964116	.	TC	T	4453.17	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.254;DP=516;FS=4.184;HRun=6;HaplotypeScore=78.9763;InbreedingCoeff=0.9908;MQ=74.91;MQ0=2;MQRankSum=1.051;QD=27.66;ReadPosRankSum=4.828;VQSLOD=5.3387;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,1365	0/0:5,0:5:12.03:0,12,141	0/0:40,0:28:61.63:0,62,756	0/0:37,0:27:45.98:0,46,447	0/0:10,0:10:27.09:0,27,355	1/1:1,23:24:63.16:677,63,0	1/1:0,31:30:72.18:774,72,0	1/1:4,9:13:26.67:289,27,0	1/1:0,15:15:42.11:451,42,0	0/0:15,0:15:45.14:0,45,572	0/0:8,0:8:21.07:0,21,276	0/0:21,0:21:51.12:0,51,651	0/0:12,0:12:30.05:0,30,375	0/0:17,0:17:51.15:0,51,655	1/1:0,24:22:63.16:677,63,0	1/1:1,18:19:54.13:580,54,0	1/1:1,20:21:57.09:599,57,0	0/0:14,0:13:36.10:0,36,454	0/0:12,0:12:36.10:0,36,444	0/0:19,0:19:57.17:0,57,733	0/0:31,0:31:81.10:0,81,1022	0/0:10,0:10:27.07:0,27,341	0/0:12,0:12:36.12:0,36,471	0/0:21,0:21:60.11:0,60,767	1/1:0,14:14:39.05:406,39,0	0/0:12,0:12:36.10:0,36,456	0/0:14,0:14:39.13:0,39,512	0/0:6,0:6:15.05:0,15,197
chr10	77964794	.	G	GA	3676.23	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-11.161;DP=530;FS=8.339;HRun=7;HaplotypeScore=50.9433;InbreedingCoeff=0.9962;MQ=77.01;MQ0=0;MQRankSum=-0.363;QD=31.15;ReadPosRankSum=0.455;VQSLOD=3.6335;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:57.06:0,57,543	1/1:1,9:10:27.08:326,27,0	0/0:17,0:15:36.03:0,36,336	0/0:14,0:15:35.99:0,36,336	1/1:5,30:35:93.21:1085,93,0	0/0:23,0:23:69.11:0,69,666	0/0:15,0:15:39.06:0,39,377	0/0:30,0:30:69.05:0,69,645	0/0:15,0:15:39.06:0,39,377	1/1:2,16:18:48.15:580,48,0	1/1:2,13:15:39.06:455,39,0	0/0:13,0:13:39.04:0,39,370	0/0:17,0:17:48.08:0,48,463	1/1:0,7:7:15.05:181,15,0	0/0:11,0:11:30.05:0,30,289	0/0:16,0:16:39.06:0,39,377	0/0:8,0:8:24.04:0,24,232	0/0:24,0:24:66.05:0,66,628	0/0:20,0:20:57.09:0,57,551	0/0:29,0:29:78.12:0,78,753	0/0:18,0:18:48.04:0,48,451	0/0:17,0:17:42.06:0,42,406	0/0:29,0:29:72.10:0,72,690	0/0:16,0:16:39.06:0,39,377	0/0:26,0:26:72.07:0,72,681	1/1:4,19:23:57.17:687,57,0	0/0:30,0:29:81.11:0,81,776	1/1:0,10:10:30.09:362,30,0
chr10	77965526	.	C	CA	561.66	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.763;DP=613;FS=2.022;HRun=4;HaplotypeScore=106.8471;InbreedingCoeff=0.9873;MQ=66.62;MQ0=0;MQRankSum=-2.112;QD=29.56;ReadPosRankSum=-0.693;VQSLOD=2.6698;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.25:0,93,1045	0/0:9,0:9:21.06:0,21,238	0/0:21,0:17:48.11:0,48,520	0/0:17,0:17:40.45:0,40,395	0/0:37,0:37:99:0,99,1122	0/0:26,0:25:69.19:0,69,783	0/0:19,0:19:51.14:0,51,577	0/0:23,0:23:60.10:0,60,681	0/0:17,0:17:51.15:0,51,578	0/0:31,0:31:84.22:0,84,938	0/0:30,0:30:75.21:0,75,850	0/0:8,0:8:21.06:0,21,238	0/0:25,0:25:69.16:0,69,768	0/0:17,0:17:30.08:0,30,340	0/0:27,0:27:72.20:0,72,817	0/0:16,0:16:39.11:0,39,442	0/0:33,0:33:86.27:0,86,985	1/1:2,17:19:48.13:657,48,0	0/0:19,0:19:42.11:0,42,476	0/0:37,0:37:99:0,99,1123	0/0:10,0:10:24.07:0,24,272	0/0:20,0:20:60.14:0,60,662	0/0:15,0:15:45.13:0,45,511	0/0:25,0:25:54.83:0,55,691	0/0:23,0:23:66.19:0,66,749	0/0:20,0:20:51.14:0,51,578	0/0:27,0:27:69.20:0,69,783	0/0:8,0:8:24.07:0,24,272
chr10	77965565	.	AAGAAAG	A	6512.28	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.585;DP=579;FS=16.651;HRun=0;HaplotypeScore=145.2729;InbreedingCoeff=0.9752;MQ=59.68;MQ0=8;MQRankSum=-7.302;QD=49.34;ReadPosRankSum=-0.132;VQSLOD=3.8538;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.25:0,72,2172	1/1:0,6:6:15.05:338,15,0	0/0:31,0:20:39.02:0,39,1117	0/0:29,0:17:8.11:0,8,550	1/1:5,24:29:45.43:1356,45,0	0/0:31,0:30:70.53:0,71,2230	0/0:15,0:15:39.13:0,39,1272	0/0:30,0:30:81.28:0,81,2314	0/0:10,0:10:24.08:0,24,830	1/1:2,21:21:57.16:1051,57,0	1/1:3,21:24:57.15:1111,57,0	0/0:11,0:11:27.09:0,27,774	0/0:23,0:23:48.16:0,48,1541	1/1:1,18:19:39.11:871,39,0	0/0:15,0:15:39.10:0,39,1136	0/0:12,0:12:27.09:0,27,931	0/0:27,0:27:63:0,63,1857	0/0:18,0:18:31.74:0,32,1641	0/0:23,0:23:64.76:0,65,1872	0/0:37,0:37:99:0,102,2925	0/0:6,0:6:12.04:0,12,386	0/0:15,0:15:36.12:0,36,1073	0/0:15,0:15:41.47:0,41,1331	0/0:15,0:15:18.21:0,18,1142	0/0:28,0:28:75.24:0,75,2330	1/1:2,22:24:66.23:1379,66,0	0/0:26,0:25:72.25:0,72,2257	1/1:0,7:7:18.06:407,18,0
chr10	77965569	.	AAG	A	2415.88	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.156;DP=581;FS=12.869;HRun=0;HaplotypeScore=118.5507;InbreedingCoeff=0.9777;MQ=61.37;MQ0=8;MQRankSum=-7.204;QD=18.58;ReadPosRankSum=0.789;VQSLOD=3.4649;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.26:0,81,1374	1/1:6,0:6:14.79:96,15,0	0/0:29,0:20:38.69:0,39,747	0/0:36,2:23:14.21:0,14,448	1/1:27,1:28:74.31:612,74,0	0/0:28,0:28:70.53:0,71,1270	0/0:16,0:16:45.15:0,45,791	0/0:35,0:35:99:0,102,1647	0/0:8,0:8:24.08:0,24,438	1/1:23,0:21:56.60:519,57,0	1/1:23,1:24:56.60:496,57,0	0/0:10,0:10:27.09:0,27,466	0/0:23,0:23:51.17:0,51,915	1/1:18,0:18:38.42:248,38,0	0/0:14,0:14:39.10:0,39,644	0/0:11,0:11:30.09:0,30,520	0/0:27,0:27:65.96:0,66,1139	0/0:17,1:18:11.27:0,11,881	0/0:24,0:24:63.01:0,63,1106	0/0:36,0:36:99:0,102,1745	0/0:5,0:5:12.04:0,12,220	0/0:12,0:12:36.12:0,36,631	0/0:16,0:16:44.48:0,44,793	0/0:14,1:15:18.21:0,18,629	0/0:28,0:28:75.24:0,75,1316	1/1:24,0:24:65.30:516,65,0	0/0:29,0:28:78.27:0,78,1361	1/1:7,0:7:17.80:126,18,0
chr10	77965598	.	TA	T	3541.42	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-12.074;DP=649;FS=10.078;HRun=10;HaplotypeScore=132.2780;InbreedingCoeff=0.8549;MQ=80.95;MQ0=6;MQRankSum=3.428;QD=17.71;ReadPosRankSum=-0.609;VQSLOD=2.4873;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:26:41.65:0,42,658	0/0:10,0:10:11.22:0,11,158	0/0:68,1:52:23.72:0,24,602	0/0:52,2:33:35.84:0,36,426	0/1:23,0:23:30.60:31,0,286	1/1:5,20:25:53.98:469,54,0	1/1:4,12:16:1.53:206,2,0	1/1:11,33:44:99:857,102,0	1/1:0,10:10:21:182,21,0	0/0:32,0:30:45.58:0,46,369	0/0:23,0:23:22.34:0,22,394	0/0:1,0:14:39.97:0,40,218	0/0:1,0:17:33.91:0,34,170	0/0:17,0:17:38.51:0,39,275	1/1:1,18:19:44.99:391,45,0	1/1:1,18:19:44.99:391,45,0	1/1:1,15:16:44.99:390,45,0	0/0:17,0:17:48.07:0,48,509	0/0:2,0:22:61.88:0,62,322	0/0:7,0:32:73.99:0,74,391	0/0:3,0:5:5.87:0,6,40	0/0:1,0:12:31.69:0,32,186	0/0:3,0:12:28.53:0,29,148	0/0:4,0:11:28.85:0,29,176	1/1:2,26:28:71.97:625,72,0	0/0:25,0:25:58.33:0,58,418	0/0:9,0:32:54.47:0,54,279	0/0:15,0:15:41.35:0,41,271
chr10	77968065	.	C	CTTTG	14798.52	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-11.201;DP=751;FS=5.913;HRun=0;HaplotypeScore=126.2121;InbreedingCoeff=0.9855;MQ=70.43;MQ0=1;MQRankSum=-0.956;QD=35.92;ReadPosRankSum=1.510;VQSLOD=4.6435;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:69.28:0,69,1343	1/1:5,5:10:15.05:369,15,0	0/0:36,0:33:32.69:0,33,596	0/0:26,0:23:36.01:0,36,499	1/1:5,24:31:72.16:1659,72,0	0/0:33,0:33:78.23:0,78,1236	0/0:26,0:26:54.18:0,54,895	0/0:33,0:33:72.19:0,72,1074	0/0:32,0:32:78.27:0,78,1287	1/1:8,19:28:60.21:1442,60,0	1/1:3,11:14:33.11:777,33,0	1/1:6,16:23:45.15:1106,45,0	1/1:4,11:15:36.12:884,36,0	1/1:5,11:16:27.09:664,27,0	0/0:20,0:20:45.13:0,45,693	0/0:25,0:25:57.17:0,57,917	0/0:33,0:33:45.63:0,46,1136	1/1:8,10:19:24.08:590,24,0	1/1:18,0:33:42:562,42,0	1/1:23,0:36:15.05:263,15,0	1/1:9,1:15:9.03:147,9,0	1/1:2,20:22:56.94:1226,57,0	1/1:4,12:17:24.08:590,24,0	1/1:9,33:44:87.30:2139,87,0	0/0:30,0:30:69.21:0,69,1095	1/1:8,21:29:63.18:1470,63,0	1/1:24,0:48:24.08:421,24,0	1/1:3,6:9:21.07:489,21,0
chr10	77968525	.	AGATGATGATGAT	A	5820.80	PASS	AB=1.000;AC=40;AF=0.769;AN=52;BaseQRankSum=4.679;DP=306;FS=21.272;HRun=0;HaplotypeScore=89.9468;InbreedingCoeff=0.4083;MQ=32.79;MQ0=17;MQRankSum=-0.295;QD=25.99;ReadPosRankSum=-0.284;VQSLOD=2.1870;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:61.28:0,61,1872	0/1:5,0:4:0:0,0,0	0/0:25,0:4:5.67:0,6,306	0/0:27,0:15:39.10:0,39,1120	1/1:10,0:9:11.77:184,12,0	1/1:16,0:16:29.88:591,30,0	0/1:16,0:15:99:364,0,100	0/1:15,0:11:99:558,0,163	1/1:13,0:13:17.93:272,18,0	1/1:10,0:8:21.49:347,21,0	1/1:5,0:5:2.16:40,2,0	./.	1/1:8,0:8:11.98:212,12,0	1/1:3,0:3:6.01:59,6,0	1/1:18,0:18:39.86:693,40,0	1/1:12,0:12:24.05:438,24,0	1/1:7,0:7:3.01:82,3,0	1/1:4,0:1:1.25:3,1,0	1/1:12,0:9:13.87:505,14,0	1/1:2,12:14:15.05:253,15,0	1/1:6,0:5:0.89:2,1,0	1/1:1,0:1:2.94:18,3,0	1/1:4,0:4:8.81:112,9,0	0/0:5,0:4:2.14:0,2,66	0/1:21,0:18:64.96:370,0,65	1/1:8,0:8:10.85:203,11,0	1/1:16,0:14:23.98:515,24,0	./.
chr10	77968606	.	AGC	A	1206.11	PASS	AB=0.953;AC=27;AF=0.482;AN=56;BaseQRankSum=3.393;DP=551;FS=2.513;HRun=0;HaplotypeScore=175.3092;InbreedingCoeff=-0.2466;MQ=53.56;MQ0=14;MQRankSum=9.966;QD=2.89;ReadPosRankSum=4.821;VQSLOD=2.7321;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:88.77:0,89,566	0/1:12,0:11:28.75:29,0,29	0/0:20,0:11:29.93:0,30,232	0/0:14,0:14:9.88:0,10,134	1/1:15,0:14:2.76:37,3,0	0/1:18,4:22:10.62:84,0,11	0/1:19,0:18:11.83:12,0,93	0/1:25,0:24:89.65:90,0,125	0/1:19,1:19:12.52:74,0,13	0/1:25,0:23:37.31:59,0,37	0/1:12,0:11:13.82:26,0,14	0/1:12,6:18:10.41:81,0,10	0/1:18,3:21:26.44:46,0,26	0/1:10,0:10:16.33:16,0,35	0/1:22,1:23:58.71:108,0,59	0/1:11,2:13:23.41:43,0,23	1/1:19,0:19:25.52:105,26,0	0/0:13,0:12:33.84:0,34,165	0/1:21,0:18:24.16:88,0,24	0/1:22,0:21:4.66:35,0,5	1/1:10,0:8:2.49:18,2,0	0/1:18,1:17:14.43:34,0,14	0/0:19,0:19:10.01:0,10,50	1/1:18,0:18:15.75:93,16,0	1/1:25,3:24:21.57:173,22,0	0/1:30,0:29:60.28:96,0,60	0/0:26,1:25:5.25:0,5,153	0/1:16,0:16:11.33:28,0,11
chr10	77968819	.	GAC	G	14037.88	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=6.503;DP=761;FS=10.940;HRun=0;HaplotypeScore=186.9111;InbreedingCoeff=0.9815;MQ=54.33;MQ0=11;MQRankSum=1.237;QD=22.28;ReadPosRankSum=4.436;VQSLOD=4.4158;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,111,1790	1/1:2,5:7:12.03:139,12,0	0/0:39,0:17:29.75:0,30,372	0/0:45,0:28:44.80:0,45,468	1/1:8,11:19:41.77:466,42,0	1/1:8,24:32:51.12:631,51,0	1/1:7,24:30:50.90:540,51,0	1/1:13,32:44:96.20:1123,96,0	1/1:4,23:27:48.15:611,48,0	1/1:3,21:24:60.19:763,60,0	1/1:4,17:21:38.96:441,39,0	1/1:8,25:33:69.22:877,69,0	1/1:4,32:36:75.16:954,75,0	1/1:6,21:27:56.91:673,57,0	1/1:10,20:30:57.17:714,57,0	1/1:6,18:24:59.97:668,60,0	1/1:6,29:36:43.59:575,44,0	1/1:1,12:13:30.10:379,30,0	1/1:5,9:14:24.06:289,24,0	1/1:3,21:23:47.98:538,48,0	1/1:5,32:37:60.14:745,60,0	1/1:11,9:20:36.07:439,36,0	1/1:7,8:15:21.02:249,21,0	1/1:5,31:36:20.87:231,21,0	1/1:3,12:15:18.06:229,18,0	1/1:6,12:18:48.15:609,48,0	1/1:7,19:26:62.95:692,63,0	1/1:4,15:19:24.13:461,24,0
chr10	77968861	.	CAG	C	1661.86	PASS	AB=0.972;AC=20;AF=0.357;AN=56;BaseQRankSum=-0.873;DP=681;FS=23.042;HRun=0;HaplotypeScore=220.5587;InbreedingCoeff=0.6539;MQ=41.55;MQ0=20;MQRankSum=-1.868;QD=6.67;ReadPosRankSum=-1.695;VQSLOD=1.2356;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:71.44:0,71,1126	0/0:5,0:5:3.50:0,4,46	0/0:48,0:12:10.54:0,11,259	0/0:52,0:11:10.12:0,10,131	0/0:22,0:21:19.61:0,20,205	1/1:20,2:22:11.59:203,12,0	1/1:21,0:20:36.17:249,36,0	1/1:17,0:15:37.12:269,37,0	1/1:21,0:21:33.57:273,34,0	0/0:28,0:27:50.69:0,51,458	0/0:13,0:13:26.88:0,27,236	0/1:21,3:24:2.22:2,0,301	0/0:21,1:22:4.61:0,5,298	0/0:37,0:37:17.20:0,17,336	1/1:19,3:22:14.32:263,14,0	1/1:18,7:25:17.37:210,17,0	1/1:32,1:33:29.49:291,29,0	0/1:14,0:14:4.24:4,0,139	0/1:15,0:11:8.72:9,0,132	0/0:14,0:13:28.52:0,29,257	0/0:36,0:35:44.89:0,45,363	0/0:22,0:22:20.84:0,21,155	0/0:19,0:18:5.92:0,6,41	0/0:32,1:33:25.69:0,26,170	1/1:10,3:13:8.80:70,9,0	0/0:24,0:24:17.19:0,17,274	0/1:22,0:22:15.76:16,0,157	0/0:19,0:19:28.66:0,29,258
chr10	77968866	.	ACACACACACACACACACACACACACGCACCCACC	A	3837.50	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=-4.762;DP=678;FS=16.789;HRun=0;HaplotypeScore=486.6888;InbreedingCoeff=0.6937;MQ=41.38;MQ0=20;MQRankSum=-5.964;QD=21.20;ReadPosRankSum=-6.807;VQSLOD=-0.4674;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:75.26:0,75,6663	0/0:6,0:6:9:0,9,181	0/0:50,0:11:26.97:0,27,835	0/0:51,0:9:12.04:0,12,426	0/0:26,0:25:20.51:0,21,955	0/0:20,0:20:27.09:0,27,899	0/0:19,0:19:18.95:0,19,679	0/0:19,0:17:27.28:0,27,1071	0/0:18,0:18:28.32:0,28,700	0/0:27,0:26:65.34:0,65,2203	0/0:12,0:12:17.40:0,17,692	1/1:21,1:22:48:1177,48,0	1/1:21,1:22:47.99:1305,48,0	0/0:35,0:35:43.04:0,43,1895	0/0:22,0:22:33.07:0,33,906	0/0:24,0:24:42.06:0,42,1026	0/1:31,0:31:15.39:15,0,1092	0/0:15,0:15:39.50:0,40,1040	0/0:19,0:14:7.65:0,8,1041	0/0:16,0:15:20.22:0,20,919	0/0:34,0:33:28.58:0,29,1414	1/1:7,18:25:11.64:100,12,0	1/1:4,16:19:5.72:195,6,0	1/1:31,2:33:25.84:1018,26,0	0/0:9,0:9:3.01:0,3,96	0/1:28,0:28:26.64:27,0,1021	0/0:20,0:20:42.14:0,42,1472	0/0:17,0:17:34:0,34,1370
chr10	77968880	.	ACACACACACACGCACCCACC	A	5771.26	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=-0.507;DP=604;FS=83.291;HRun=0;HaplotypeScore=301.7905;InbreedingCoeff=0.2722;MQ=41.22;MQ0=23;MQRankSum=-0.745;QD=14.46;ReadPosRankSum=-4.627;VQSLOD=-0.7263;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:75.26:0,75,3672	0/1:6,0:6:56.70:57,0,82	0/0:42,0:9:11.90:0,12,118	0/1:50,0:11:9.91:10,0,555	0/0:26,0:26:14.98:0,15,204	1/1:19,0:19:14.48:434,14,0	1/1:17,0:17:19.85:363,20,0	1/1:21,0:21:35.88:614,36,0	1/1:15,0:15:17.47:324,17,0	0/1:23,0:23:99:276,0,955	0/0:9,0:9:8.32:0,8,118	1/1:8,0:8:17.17:129,17,0	1/1:9,0:9:23.37:172,23,0	0/0:37,0:37:7.44:0,7,879	1/1:19,1:20:14.82:423,15,0	1/1:23,0:23:24.05:977,24,0	1/1:29,1:29:38.69:662,39,0	0/1:15,0:15:55.30:55,0,148	0/1:17,0:12:99:159,0,272	0/0:16,0:14:10.77:0,11,318	0/1:33,0:32:99:157,0,174	0/0:18,0:18:0:0,0,0	1/1:17,0:16:2.87:34,3,0	1/1:13,0:13:20.52:120,21,0	1/1:11,2:13:4.69:51,5,0	0/1:28,0:28:99:600,0,377	0/0:22,0:22:1.07:0,1,571	0/1:22,0:21:99:153,0,506
chr10	77968881	.	C	CATAGAG	1029.50	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=4.205;DP=614;FS=0.000;HRun=0;HaplotypeScore=236.5134;InbreedingCoeff=0.8309;MQ=41.12;MQ0=22;MQRankSum=-5.685;QD=14.71;ReadPosRankSum=-0.323;VQSLOD=2.6523;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:70.50:0,71,1876	0/0:6,0:6:8.74:0,9,89	0/0:42,0:8:15.04:0,15,263	0/0:48,0:12:27.91:0,28,521	0/0:27,0:27:18.06:0,18,305	0/0:19,0:19:23.87:0,24,606	0/0:17,0:17:30.88:0,31,509	0/0:22,0:22:39.11:0,39,638	0/0:16,0:16:19.50:0,20,371	0/0:25,0:25:29.91:0,30,830	0/0:8,0:8:12.50:0,13,145	1/1:11,0:11:18.06:315,18,0	1/1:10,0:10:21.06:438,21,0	0/0:36,0:36:43.24:0,43,654	0/0:20,0:20:24.04:0,24,411	0/0:23,0:23:39.08:0,39,735	0/0:31,0:30:42.73:0,43,668	0/0:15,0:15:36.72:0,37,556	0/0:17,0:13:36.10:0,36,672	0/0:16,0:14:17.73:0,18,315	0/0:33,0:32:27.15:0,27,399	0/1:18,0:18:0:0,0,0	1/1:17,0:16:3.01:51,3,0	1/1:10,4:14:22.97:373,23,0	0/0:13,0:13:2.67:0,3,25	0/0:28,0:28:47.84:0,48,566	0/0:24,0:24:42.05:0,42,728	0/0:22,0:21:35.93:0,36,471
chr10	77968882	.	ACACACACACGCACCCACC	A	7448.85	PASS	AB=0.958;AC=34;AF=0.630;AN=54;BaseQRankSum=-1.728;DP=613;FS=58.728;HRun=0;HaplotypeScore=287.0586;InbreedingCoeff=0.1417;MQ=41.26;MQ0=21;MQRankSum=-0.462;QD=17.01;ReadPosRankSum=-4.015;VQSLOD=1.4376;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:72.23:0,72,3251	0/1:6,0:6:35.51:149,0,36	0/0:39,0:7:6.01:0,6,67	0/0:48,0:12:7.20:0,7,598	0/0:11,16:27:8.83:0,9,83	1/1:18,2:20:15.02:334,15,0	1/1:17,0:17:19.31:350,19,0	1/1:25,0:25:48.08:844,48,0	1/1:15,0:15:18.91:335,19,0	0/1:25,0:25:99:604,0,580	0/0:8,0:8:7.51:0,8,77	1/1:11,0:11:17.85:250,18,0	1/1:11,0:11:23.75:366,24,0	0/1:36,0:36:48.41:48,0,419	1/1:19,2:21:12.93:325,13,0	1/1:17,7:24:24.08:766,24,0	1/1:31,0:30:45:642,45,0	0/1:15,0:15:46.88:161,0,47	0/1:17,0:13:99:304,0,146	0/1:16,0:14:36.39:36,0,221	0/1:33,0:32:58.64:169,0,59	./.	1/1:16,0:16:2.87:52,3,0	1/1:14,0:14:21.96:356,22,0	1/1:11,1:12:4.69:52,5,0	0/1:8,20:28:99:978,0,237	0/1:24,0:24:1.20:1,0,417	0/1:21,0:20:99:324,0,344
chr10	77968890	.	ACG	A	4473.44	PASS	AB=1.000;AC=49;AF=0.907;AN=54;BaseQRankSum=8.713;DP=580;FS=12.443;HRun=0;HaplotypeScore=181.4251;InbreedingCoeff=0.5789;MQ=52.44;MQ0=14;MQRankSum=-5.860;QD=9.26;ReadPosRankSum=3.602;VQSLOD=3.9567;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:67.95:0,68,1075	1/1:0,6:6:8.94:89,9,0	0/0:42,0:15:11.43:0,11,179	0/1:42,0:16:19.40:19,0,155	1/1:21,1:23:7.56:70,8,0	1/1:11,2:13:22.43:166,22,0	1/1:11,0:13:9.94:91,10,0	1/1:1,0:29:35.94:259,36,0	1/1:5,2:8:17.90:141,18,0	1/1:13,9:22:64.30:620,64,0	1/1:6,0:8:6.41:43,6,0	1/1:16,0:16:26.69:196,27,0	1/1:11,0:11:22.68:142,23,0	1/1:10,27:37:28.10:322,28,0	1/1:6,0:21:11.91:97,12,0	1/1:8,12:20:19.47:127,19,0	1/1:18,0:20:40.90:269,41,0	1/1:11,0:11:23.51:139,24,0	1/1:12,2:12:35.51:257,36,0	1/1:16,0:17:11.22:69,11,0	1/1:28,1:28:27.58:218,28,0	./.	1/1:16,0:16:2.92:17,3,0	1/1:16,0:16:19.67:117,20,0	1/1:10,0:11:5.99:48,6,0	1/1:24,2:26:36.02:400,36,0	1/1:4,1:26:34.77:236,35,0	1/1:15,6:20:34.93:321,35,0
chr10	77968894	.	ACC	A	4510.69	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=9.153;DP=576;FS=16.787;HRun=3;HaplotypeScore=178.6110;InbreedingCoeff=0.6213;MQ=56.00;MQ0=14;MQRankSum=-7.277;QD=9.91;ReadPosRankSum=4.896;VQSLOD=0.2667;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:84.23:0,84,1398	1/1:6,0:6:8.94:88,9,0	0/0:42,0:17:42.17:0,42,618	0/0:45,0:20:10.59:0,11,575	1/1:19,0:19:3.01:40,3,0	1/1:12,0:12:23.73:175,24,0	0/1:15,0:15:20.93:100,0,21	1/1:28,0:28:45.11:343,45,0	1/1:8,1:9:20.82:162,21,0	1/1:22,1:23:67.51:657,68,0	1/1:7,0:7:2.94:18,3,0	1/1:16,0:16:26.76:205,27,0	1/1:10,1:11:23.65:176,24,0	1/1:33,2:35:24.39:306,24,0	1/1:18,0:18:8.90:70,9,0	1/1:21,0:21:22.44:153,22,0	1/1:21,0:20:44.41:298,44,0	1/1:12,0:12:21.42:134,21,0	1/1:18,0:16:33.77:226,34,0	1/1:18,0:17:9.58:59,10,0	1/1:28,0:27:30.54:235,31,0	0/1:18,0:18:0:0,0,0	1/1:16,0:16:2.92:17,3,0	1/1:17,0:17:19.73:124,20,0	1/1:14,0:14:5.56:47,6,0	1/1:26,0:26:34.91:395,35,0	1/1:24,0:25:31.76:203,32,0	1/1:18,1:18:28.95:279,29,0
chr10	77969588	.	TTGTG	T	11258.08	PASS	AB=0.699;AC=40;AF=0.714;AN=56;BaseQRankSum=4.964;DP=840;FS=22.175;HRun=0;HaplotypeScore=225.5825;InbreedingCoeff=0.1092;MQ=56.32;MQ0=9;MQRankSum=-4.532;QD=15.40;ReadPosRankSum=5.261;VQSLOD=2.8706;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:79.03:0,79,2069	1/1:2,0:7:11.05:90,11,0	0/0:32,0:18:3.01:0,3,58	0/0:34,0:18:12.02:0,12,133	1/1:6,0:32:16.83:145,17,0	1/1:12,10:22:50.09:749,50,0	1/1:10,32:43:67.46:1031,67,0	0/1:27,11:35:6.22:347,0,6	1/1:16,22:39:80.05:1221,80,0	0/1:16,0:40:60.44:281,0,60	1/1:5,0:26:32.72:281,33,0	0/1:19,0:30:99:204,0,123	0/1:16,0:31:13.75:357,0,14	0/1:29,0:45:0.28:308,0,0	1/1:18,31:49:99:1677,108,0	1/1:8,36:45:78.26:1240,78,0	1/1:19,10:29:6.68:690,7,0	0/1:18,0:21:8.54:93,0,9	1/1:6,0:19:18.02:168,18,0	1/1:9,0:25:36.04:335,36,0	1/1:11,0:33:21.02:196,21,0	0/1:6,0:19:12:172,0,12	0/1:2,0:14:16.26:122,0,16	0/1:23,0:29:19.23:74,0,19	1/1:14,10:24:55.42:838,55,0	0/1:11,0:27:24.86:221,0,25	1/1:8,0:25:30.03:280,30,0	1/1:4,0:12:15.02:139,15,0
chr10	77969779	.	GTCT	G	2441.04	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.680;DP=667;FS=1.704;HRun=0;HaplotypeScore=114.1255;InbreedingCoeff=0.9982;MQ=76.61;MQ0=0;MQRankSum=-1.453;QD=29.77;ReadPosRankSum=3.689;VQSLOD=4.1510;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,2407	0/0:10,0:10:21.07:0,21,457	0/0:28,0:28:65.94:0,66,1518	0/0:29,0:29:31.89:0,32,1056	0/0:23,0:23:54.19:0,54,1172	0/0:24,0:24:66.23:0,66,1437	0/0:22,0:22:63.22:0,63,1369	0/0:34,0:34:90.30:0,90,1883	0/0:32,0:32:81.28:0,81,1722	0/0:39,0:39:99:0,114,2428	0/0:17,0:17:45.15:0,45,974	0/0:20,0:20:39.13:0,39,828	0/0:20,0:20:45.15:0,45,974	0/0:26,0:26:51.18:0,51,1109	0/0:24,0:23:51.18:0,51,1110	0/0:31,0:31:81.26:0,81,1724	0/0:27,0:27:72.25:0,72,1516	0/0:17,0:17:45.15:0,45,980	1/1:5,12:17:36.12:557,36,0	1/1:2,13:15:30.10:475,30,0	1/1:7,18:24:39.13:618,39,0	0/0:21,0:21:51.17:0,51,1082	0/0:10,0:10:27.09:0,27,584	0/0:24,0:24:45.15:0,45,952	0/0:22,0:22:51.15:0,51,1067	0/0:28,0:27:69.24:0,69,1480	1/1:2,23:25:60.20:951,60,0	0/0:16,0:16:36.12:0,36,784
chr10	77970072	.	C	CACACAT	4363.96	PASS	AB=0.979;AC=26;AF=0.464;AN=56;BaseQRankSum=-2.949;DP=571;FS=21.919;HRun=0;HaplotypeScore=173.3612;InbreedingCoeff=0.1588;MQ=42.11;MQ0=20;MQRankSum=0.676;QD=11.19;ReadPosRankSum=4.203;VQSLOD=2.4042;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:38.33:0,38,367	0/1:11,1:11:2.41:26,0,2	0/0:22,0:8:18.02:0,18,185	0/0:16,0:7:11.13:0,11,119	0/1:17,0:17:11.47:125,0,11	1/1:19,0:19:14.14:307,14,0	1/1:18,0:17:11.64:192,12,0	0/1:35,0:35:8.51:445,0,9	1/1:16,0:16:13.76:173,14,0	0/1:29,0:27:50.89:407,0,51	1/1:14,1:14:6.89:59,7,0	0/0:23,0:21:23.19:0,23,156	0/0:23,0:22:35.33:0,35,181	0/1:18,0:17:24.28:133,0,24	1/1:20,2:22:36.46:604,36,0	0/1:30,2:32:14.06:341,0,14	0/1:28,1:29:5.62:362,0,6	0/1:18,0:16:99:145,0,103	0/1:21,0:20:63.05:63,0,156	0/0:6,0:5:0:0,0,0	1/1:24,0:22:8.74:73,9,0	0/0:13,0:12:18.67:0,19,91	0/0:15,0:15:10.22:0,10,55	0/0:30,0:28:13.21:0,13,64	0/1:23,1:22:5.10:240,0,5	0/1:20,0:20:10.25:348,0,10	1/1:16,0:15:29.73:306,30,0	0/1:4,0:3:11.45:14,0,11
chr10	77970074	.	C	CACAT	3522.37	PASS	AB=0.988;AC=24;AF=0.429;AN=56;BaseQRankSum=-5.140;DP=570;FS=29.152;HRun=0;HaplotypeScore=163.5735;InbreedingCoeff=-0.1320;MQ=41.59;MQ0=21;MQRankSum=3.308;QD=8.89;ReadPosRankSum=4.755;VQSLOD=1.5184;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:31:41.32:0,41,378	0/1:12,0:11:15.84:26,0,16	0/0:19,0:6:18.02:0,18,185	0/0:16,0:7:17.94:0,18,146	0/1:15,0:15:11.41:101,0,11	1/1:18,1:19:9.35:302,9,0	0/1:19,0:18:8.31:155,0,8	0/1:36,0:36:99:358,0,123	0/1:14,1:16:55.34:161,0,55	0/1:29,0:27:72.95:334,0,73	1/1:15,0:14:7.11:59,7,0	0/0:24,0:22:23.20:0,23,155	0/0:24,0:23:35.99:0,36,183	0/1:19,0:18:45.78:104,0,46	0/1:21,1:22:19.64:468,0,20	0/1:31,0:31:99:218,0,110	0/1:27,1:28:83.48:270,0,83	0/1:18,0:16:39.65:40,0,153	0/1:21,0:20:61.24:61,0,161	0/1:6,0:5:0:0,0,0	1/1:25,0:23:9.36:73,9,0	0/0:13,0:12:18.67:0,19,91	0/0:15,0:15:9.99:0,10,55	0/0:29,0:27:19.63:0,20,111	0/1:25,0:23:25.65:175,0,26	0/1:20,0:19:33.68:317,0,34	1/1:16,0:15:29.73:285,30,0	0/1:4,0:3:12.01:14,0,12
chr10	77970097	.	ACACACG	A	1712.42	PASS	AB=0.967;AC=22;AF=0.393;AN=56;BaseQRankSum=5.426;DP=534;FS=16.604;HRun=0;HaplotypeScore=187.3530;InbreedingCoeff=-0.5118;MQ=50.22;MQ0=20;MQRankSum=-2.548;QD=4.24;ReadPosRankSum=0.241;VQSLOD=1.6573;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:28.55:0,29,296	0/1:10,0:10:36.44:36,0,100	0/0:14,0:6:10.99:0,11,113	0/0:23,0:17:26.79:0,27,339	0/0:17,0:17:3.48:0,3,40	0/1:18,1:19:43.37:43,0,147	0/1:15,1:15:41.60:42,0,67	0/1:28,0:28:99:316,0,130	0/1:12,2:14:79.10:119,0,79	0/1:25,0:24:99:121,0,496	0/0:16,0:15:0.08:0,0,55	0/1:22,0:20:40.45:40,0,77	0/1:22,0:21:47:138,0,47	0/1:20,0:19:55.32:76,0,55	0/1:19,3:22:56.12:56,0,287	0/1:24,3:27:95.09:95,0,187	0/1:26,3:29:99:203,0,142	0/1:18,1:17:99:105,0,251	0/1:16,0:14:89.03:89,0,226	1/1:7,0:6:0.16:2,0,0	1/1:34,0:32:3.69:9,4,0	0/0:10,0:9:0.66:0,1,21	0/0:11,0:10:3.66:0,4,60	0/1:25,0:23:67.24:95,0,67	0/1:25,0:23:34.72:124,0,35	0/1:20,0:19:99:121,0,347	0/0:12,0:11:15.66:0,16,193	0/1:4,0:4:29.87:30,0,31
chr10	77970099	.	ACACGCC	A	1722.51	PASS	AB=0.988;AC=19;AF=0.339;AN=56;BaseQRankSum=0.915;DP=537;FS=6.333;HRun=0;HaplotypeScore=192.7757;InbreedingCoeff=0.0819;MQ=54.55;MQ0=18;MQRankSum=-3.959;QD=6.52;ReadPosRankSum=-1.760;VQSLOD=1.8070;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:31.59:0,32,669	0/1:10,0:10:55.81:56,0,56	0/0:17,0:9:27.02:0,27,406	0/0:24,0:18:50.46:0,50,772	0/1:17,0:17:11.95:12,0,13	0/0:18,0:18:26.31:0,26,226	0/0:14,0:14:11.25:0,11,93	0/1:30,0:30:10.79:11,0,75	0/0:14,0:14:17.07:0,17,210	0/1:25,0:24:99:301,0,230	0/0:17,0:16:0.15:0,0,37	0/1:22,0:20:51.83:108,0,52	1/1:21,1:21:9.75:328,10,0	1/1:21,0:20:6.75:209,7,0	0/0:22,0:22:25.08:0,25,209	0/0:26,0:26:35.02:0,35,344	0/0:29,0:29:32.88:0,33,253	0/0:19,0:17:24.59:0,25,297	0/1:18,0:16:85.47:293,0,85	1/1:7,0:6:0.12:2,0,0	1/1:34,0:33:3.69:9,4,0	1/1:9,0:8:1.28:4,1,0	0/0:11,0:10:0.35:0,0,16	0/1:22,3:23:21.04:206,0,21	0/0:26,0:24:21.70:0,22,186	0/1:20,0:19:99:271,0,159	0/0:11,0:10:9.43:0,9,70	0/1:4,0:4:10.88:70,0,11
chr10	77970116	.	A	ACAC	16127.29	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=3.794;DP=501;FS=3.148;HRun=0;HaplotypeScore=132.5091;InbreedingCoeff=0.7420;MQ=76.61;MQ0=2;MQRankSum=-10.017;QD=37.86;ReadPosRankSum=2.127;VQSLOD=6.0601;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.22:0,72,1270	1/1:0,8:9:18.06:443,18,0	0/0:25,0:24:65.06:0,65,1001	0/0:23,0:20:51.17:0,51,918	1/1:1,9:11:2.75:74,3,0	1/1:4,15:19:33.11:780,33,0	1/1:1,14:15:27.09:527,27,0	1/1:5,18:26:60.60:1274,61,0	1/1:1,12:15:42.12:967,42,0	1/1:1,16:18:51.17:1133,51,0	1/1:2,8:10:5.80:139,6,0	1/1:1,16:19:10.11:611,10,0	1/1:1,18:20:39.13:895,39,0	1/1:1,21:22:27.48:663,27,0	1/1:1,11:13:21.07:508,21,0	1/1:2,22:25:48.16:1164,48,0	1/1:0,26:28:60.21:1472,60,0	1/1:1,13:14:30.10:730,30,0	1/1:1,16:16:42.14:941,42,0	1/1:1,8:10:0.42:1,0,0	1/1:2,34:37:2.91:53,3,0	1/1:1,7:10:6.02:71,6,0	1/1:0,7:8:6.19:147,6,0	1/1:1,18:19:18.91:445,19,0	1/1:0,22:22:54.18:1233,54,0	1/1:1,16:18:48.16:1080,48,0	1/1:2,13:15:24.08:557,24,0	1/1:0,4:5:9.03:221,9,0
chr10	77971777	.	C	CCA	4114.98	PASS	AB=0.677;AC=29;AF=0.518;AN=56;BaseQRankSum=-2.040;DP=689;FS=4.053;HRun=0;HaplotypeScore=125.5855;InbreedingCoeff=0.2788;MQ=57.23;MQ0=5;MQRankSum=0.439;QD=8.21;ReadPosRankSum=0.222;VQSLOD=3.3376;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:42:62.66:0,63,647	0/0:9,0:8:9.02:0,9,103	0/0:22,0:9:1.55:0,2,4	0/1:34,0:14:0.02:0,0,0	0/0:13,0:14:29.90:0,30,311	1/1:25,0:24:1.40:5,1,0	1/1:32,0:29:14.02:108,14,0	1/1:33,0:33:18.79:114,19,0	1/1:19,0:19:5.15:73,5,0	0/0:14,0:17:29.57:0,30,272	0/0:10,0:12:20.88:0,21,205	1/1:9,13:22:26.43:407,26,0	0/1:8,13:22:3.22:381,0,3	0/0:33,0:33:51.13:0,51,572	1/1:26,0:25:2.19:23,2,0	1/1:28,0:28:24.22:145,24,0	1/1:22,0:22:16.82:136,17,0	0/1:11,13:23:26.23:507,0,26	1/1:10,0:10:1.94:13,2,0	0/1:7,10:18:69.44:336,0,69	0/1:31,28:59:23.22:536,0,23	0/1:7,14:21:4.95:297,0,5	0/1:6,10:17:44.23:253,0,44	0/1:12,22:37:99:417,0,102	1/1:18,0:17:2.84:8,3,0	0/0:28,0:27:39.11:0,39,444	0/1:19,11:33:48:357,0,48	0/0:11,0:11:7.88:0,8,141
chr10	77971803	.	A	ACACACT	2438.05	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=1.318;DP=676;FS=26.725;HRun=0;HaplotypeScore=171.1667;InbreedingCoeff=0.7143;MQ=61.25;MQ0=6;MQRankSum=-0.663;QD=9.41;ReadPosRankSum=-1.067;VQSLOD=0.6864;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:81.15:0,81,1480	0/0:10,0:9:21.01:0,21,309	0/0:21,0:12:29.74:0,30,272	0/0:40,0:22:10.18:0,10,410	0/0:19,0:19:51.05:0,51,748	1/1:6,11:21:5.07:72,5,0	1/1:22,0:19:10.28:173,10,0	1/1:23,0:23:49.99:518,50,0	1/1:18,0:18:29.99:387,30,0	0/0:23,0:23:60.10:0,60,823	0/0:19,0:18:47.92:0,48,610	0/0:25,0:25:37.01:0,37,219	0/0:23,0:23:36.58:0,37,236	0/0:26,0:26:69.08:0,69,1263	1/1:18,0:17:11.47:94,11,0	1/1:28,0:28:43.27:550,43,0	1/1:20,0:20:42.46:402,42,0	0/1:25,0:24:14.96:15,0,323	0/0:15,0:13:7.76:0,8,174	0/0:24,0:24:52.25:0,52,425	0/1:45,0:45:16.79:17,0,253	0/0:26,0:26:40.07:0,40,324	0/1:16,0:16:16.17:16,0,143	0/0:40,0:40:53.56:0,54,585	1/1:22,0:21:35.70:397,36,0	0/0:28,0:27:74.80:0,75,1162	0/0:30,0:30:26.61:0,27,441	0/0:13,0:13:21.32:0,21,418
chr10	77973394	.	AGAAG	A	446.42	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.010;DP=728;FS=0.000;HRun=0;HaplotypeScore=185.6929;InbreedingCoeff=0.7994;MQ=59.20;MQ0=9;MQRankSum=-1.304;QD=21.26;ReadPosRankSum=-0.445;VQSLOD=3.1763;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:66.23:0,66,1638	0/0:7,0:7:21.07:0,21,503	0/0:42,0:25:34.78:0,35,1027	0/0:48,0:28:2.68:0,3,462	0/0:29,0:29:75.17:0,75,1738	0/0:23,0:23:54.18:0,54,1346	0/0:23,0:23:53.19:0,53,1170	0/0:27,0:27:66.17:0,66,1359	0/0:25,0:25:69.24:0,69,1685	0/0:25,0:25:69.23:0,69,1668	0/0:29,0:29:75.26:0,75,1835	0/0:17,0:17:36.12:0,36,911	0/0:19,0:19:51.18:0,51,1300	0/0:23,0:23:60.19:0,60,1447	0/0:29,0:29:69.21:0,69,1664	0/0:20,0:20:57.20:0,57,1445	1/1:13,8:19:33.11:541,33,0	0/0:33,0:33:74.08:0,74,1890	0/0:13,0:12:24.08:0,24,616	0/0:42,0:42:99:0,108,2654	0/0:21,0:21:45.15:0,45,1116	0/0:25,0:25:63.21:0,63,1549	0/0:28,0:28:66.21:0,66,1534	0/0:27,0:27:57.11:0,57,1291	0/0:31,0:31:84.29:0,84,2108	0/0:37,0:37:96.33:0,96,2459	0/0:27,0:27:69.24:0,69,1738	0/0:5,0:5:9.03:0,9,231
chr10	77973425	.	A	AAAAGG	29216.85	PASS	AB=0.984;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.305;DP=758;FS=10.306;HRun=0;HaplotypeScore=147.5061;InbreedingCoeff=0.7684;MQ=63.98;MQ0=6;MQRankSum=-3.141;QD=42.78;ReadPosRankSum=4.768;VQSLOD=4.6342;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.16:0,69,1212	1/1:7,1:8:21.07:504,21,0	0/0:49,0:30:26.49:0,26,550	0/1:61,0:36:11.76:12,0,360	1/1:27,0:27:54.14:1329,54,0	1/1:29,0:29:48.14:1182,48,0	1/1:31,1:32:69.15:1667,69,0	1/1:43,0:43:84.13:1474,84,0	1/1:25,1:26:57.17:1397,57,0	1/1:28,0:28:60.21:1521,60,0	1/1:27,0:27:56.99:1230,57,0	1/1:4,11:15:15.05:444,15,0	1/1:7,14:24:33.11:975,33,0	1/1:16,1:18:33.09:761,33,0	1/1:29,0:29:60.15:1368,60,0	1/1:16,1:17:33.11:887,33,0	1/1:16,0:15:27.09:620,27,0	1/1:6,19:25:39.13:1129,39,0	1/1:5,13:18:45.15:1003,45,0	1/1:11,28:41:84.08:1989,84,0	1/1:1,26:27:48.16:1393,48,0	1/1:2,20:24:51.09:1306,51,0	1/1:3,18:21:36.12:1063,36,0	1/1:10,16:26:33.06:870,33,0	1/1:32,0:32:69.23:1758,69,0	1/1:31,1:32:66.20:1692,66,0	1/1:10,21:31:26.26:1385,26,0	1/1:5,0:5:9.03:257,9,0
chr10	77973437	.	CA	C	5622.38	PASS	AB=0.842;AC=30;AF=0.536;AN=56;BaseQRankSum=0.298;DP=685;FS=9.008;HRun=9;HaplotypeScore=177.8653;InbreedingCoeff=0.8646;MQ=67.35;MQ0=5;MQRankSum=-0.505;QD=14.76;ReadPosRankSum=1.627;VQSLOD=3.3297;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:28:47.74:0,48,793	0/1:6,3:9:14.95:117,0,15	0/1:39,2:32:4.19:4,0,439	0/0:50,0:29:45.94:0,46,399	1/1:21,2:23:48.28:332,48,0	1/1:21,4:25:49.78:350,50,0	1/1:24,6:30:57.28:350,57,0	1/1:11,28:39:99:840,101,0	1/1:15,11:26:66.28:515,66,0	1/1:21,4:25:45.32:379,45,0	1/1:21,3:24:40.85:292,41,0	0/0:16,0:16:30.08:0,30,337	0/0:18,0:18:36.09:0,36,390	1/1:7,10:17:44.40:366,44,0	1/1:18,6:24:61.52:423,62,0	1/1:12,2:14:34.97:238,35,0	1/1:6,6:12:26.57:215,27,0	0/0:19,0:19:45.05:0,45,478	0/0:18,1:19:6.81:0,7,433	0/0:30,0:30:75.21:0,75,853	0/0:29,0:29:60.16:0,60,675	0/0:26,1:27:37.75:0,38,648	0/0:15,0:15:33.56:0,34,359	0/0:22,0:22:43.67:0,44,471	1/1:29,1:30:67.97:463,68,0	1/1:24,7:31:76.79:581,77,0	0/0:29,0:29:49.34:0,49,671	1/1:5,5:10:17.89:156,18,0
chr10	77973438	.	A	AGGAC	20999.60	PASS	AB=0.990;AC=42;AF=0.750;AN=56;BaseQRankSum=2.733;DP=702;FS=0.801;HRun=0;HaplotypeScore=158.0718;InbreedingCoeff=0.2092;MQ=67.28;MQ0=5;MQRankSum=-5.091;QD=36.27;ReadPosRankSum=9.818;VQSLOD=4.3865;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.27:0,81,1593	1/1:5,3:9:18.95:440,19,0	0/0:43,0:34:71.68:0,72,1015	0/0:51,0:29:38.97:0,39,703	1/1:5,20:26:55.40:1326,55,0	1/1:4,21:25:48.61:1179,49,0	1/1:9,22:32:69.21:1677,69,0	1/1:33,7:40:88.67:1520,89,0	1/1:14,12:26:60.13:1344,60,0	1/1:5,21:26:61.31:1514,61,0	1/1:3,18:24:44.85:1074,45,0	0/1:16,0:16:99:137,0,241	1/1:18,0:18:1.41:344,1,0	1/1:13,5:18:36.57:783,37,0	1/1:7,18:26:57.16:1364,57,0	1/1:5,11:17:33.04:878,33,0	1/1:7,5:12:27.93:515,28,0	0/1:19,0:19:35.14:323,0,35	0/1:18,1:19:99:322,0,229	0/1:29,0:29:99:517,0,133	0/1:29,0:29:99:394,0,174	0/1:27,0:27:99:436,0,268	1/1:16,0:16:36.10:445,36,0	0/1:22,0:22:99:300,0,202	1/1:1,29:31:66.17:1753,66,0	1/1:8,22:33:74.77:1720,75,0	0/1:28,1:29:99:481,0,291	1/1:9,1:10:11.80:215,12,0
chr10	77975138	.	CGCACACACGCGCGCGCGCGT	C	7120.45	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=8.006;DP=413;FS=3.324;HRun=0;HaplotypeScore=212.2965;InbreedingCoeff=0.8113;MQ=54.28;MQ0=5;MQRankSum=-6.308;QD=30.96;ReadPosRankSum=-0.311;VQSLOD=3.9693;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.20:0,57,4386	1/1:9,1:10:15.02:527,15,0	1/1:5,0:2:2.04:6,2,0	0/0:14,0:6:2.81:0,3,18	1/1:17,1:18:3.01:113,3,0	1/1:17,0:17:12.04:308,12,0	1/1:22,0:22:12.03:226,12,0	1/1:18,0:17:32.72:885,33,0	1/1:11,0:11:9.03:312,9,0	1/1:18,1:18:33.01:707,33,0	1/1:8,0:8:3.01:112,3,0	0/0:7,0:7:14.97:0,15,496	0/0:8,0:8:19.83:0,20,839	1/1:14,0:14:20.82:733,21,0	1/1:14,1:15:9.03:322,9,0	1/1:10,1:11:21.07:852,21,0	1/1:16,0:16:6.02:197,6,0	0/0:21,0:21:6.49:0,6,2173	0/0:11,0:11:24.01:0,24,810	0/0:9,0:9:5.85:0,6,155	0/0:27,0:27:32.28:0,32,1110	0/0:13,0:13:23.81:0,24,847	0/0:10,0:10:18.06:0,18,855	0/0:30,0:29:69.19:0,69,3863	1/1:19,1:20:21.07:731,21,0	1/1:17,0:17:30.89:865,31,0	0/0:11,0:11:15.67:0,16,470	1/1:1,8:9:6.02:224,6,0
chr10	77975141	.	ACACACGCGCGCGCGCGTG	A	9260.71	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=4.344;DP=411;FS=2.462;HRun=0;HaplotypeScore=189.4547;InbreedingCoeff=0.8118;MQ=51.40;MQ0=6;MQRankSum=-5.959;QD=40.62;ReadPosRankSum=0.332;VQSLOD=4.0543;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.21:0,60,4388	1/1:4,6:10:15.05:577,15,0	1/1:5,0:2:2.04:6,2,0	0/0:12,0:4:2.81:0,3,18	1/1:4,14:18:3.01:145,3,0	1/1:15,1:16:12.04:443,12,0	1/1:19,1:20:12.04:304,12,0	1/1:5,13:16:36.12:1103,36,0	1/1:1,10:11:9.03:449,9,0	1/1:5,15:19:36.10:926,36,0	1/1:2,7:9:3.01:144,3,0	0/0:7,0:7:14.97:0,15,488	0/0:9,0:9:23.11:0,23,844	1/1:1,13:14:20.75:1052,21,0	1/1:3,12:15:9.03:459,9,0	1/1:2,8:10:21.07:977,21,0	1/1:3,13:16:6.02:279,6,0	0/0:21,0:21:6.47:0,6,2018	0/0:9,0:9:24.01:0,24,801	0/0:8,0:8:5.81:0,6,155	0/0:25,0:25:32.28:0,32,1083	0/0:15,0:15:25.93:0,26,802	0/0:12,0:12:18.06:0,18,805	0/0:31,0:30:72.20:0,72,3635	1/1:4,16:20:21.07:1042,21,0	1/1:2,15:17:32.62:1127,33,0	0/0:11,0:11:15.91:0,16,455	1/1:9,0:9:6.02:226,6,0
chr10	77975143	.	ACACGCGCGCGCGCGTG	A	8180.26	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=6.920;DP=406;FS=4.941;HRun=0;HaplotypeScore=180.3666;InbreedingCoeff=0.6125;MQ=51.37;MQ0=6;MQRankSum=-6.346;QD=30.75;ReadPosRankSum=-0.639;VQSLOD=3.9404;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.21:0,60,4123	1/1:9,1:10:15.05:528,15,0	1/1:5,0:2:2.04:6,2,0	0/0:12,0:4:2.96:0,3,19	1/1:18,0:18:3.01:126,3,0	1/1:13,3:16:12.04:526,12,0	1/1:19,1:20:12.04:397,12,0	1/1:18,0:16:36.59:1032,37,0	1/1:11,0:11:9.03:349,9,0	1/1:19,0:18:36.10:778,36,0	1/1:9,0:9:3.01:125,3,0	0/0:7,0:7:14.97:0,15,444	0/0:8,0:8:23.10:0,23,763	1/1:14,0:14:20.66:817,21,0	1/1:15,0:15:9.03:358,9,0	1/1:10,0:10:21.07:828,21,0	1/1:16,0:16:6.02:246,6,0	0/1:20,0:20:10.46:10,0,1777	0/1:10,0:10:9.62:10,0,704	0/0:8,0:8:5.78:0,6,154	0/0:24,0:24:32.28:0,32,1057	0/0:15,0:15:17.29:0,17,743	0/0:12,0:12:18.05:0,18,719	0/0:31,0:30:72.20:0,72,3208	1/1:20,0:20:21.07:841,21,0	1/1:15,0:15:32.91:947,33,0	0/1:11,0:11:43.31:43,0,372	1/1:9,0:9:6.02:212,6,0
chr10	77975145	.	ACGCGCGCGCGCGTG	A	7634.35	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=7.261;DP=403;FS=4.045;HRun=0;HaplotypeScore=168.8209;InbreedingCoeff=0.6788;MQ=49.61;MQ0=6;MQRankSum=-6.148;QD=30.06;ReadPosRankSum=-0.501;VQSLOD=3.8701;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.23:0,66,4070	1/1:10,0:10:15.03:443,15,0	1/1:5,0:2:2.04:6,2,0	0/0:9,0:2:2.96:0,3,19	1/1:17,0:17:2.85:125,3,0	1/1:6,10:16:12.04:459,12,0	1/1:5,15:20:12.04:515,12,0	1/1:18,0:16:36.59:1007,37,0	1/1:11,0:11:9.03:307,9,0	1/1:18,0:17:36.09:723,36,0	1/1:9,0:9:3.01:125,3,0	0/0:7,0:7:14.97:0,15,444	0/0:7,0:8:23.11:0,23,703	1/1:13,1:14:20.64:720,21,0	1/1:15,0:15:9.03:316,9,0	1/1:10,0:10:21.07:758,21,0	1/1:16,0:16:6.02:232,6,0	0/1:20,0:20:10.46:10,0,1677	0/0:10,0:10:11.93:0,12,717	0/0:7,0:7:5.75:0,6,154	0/0:24,0:24:32.75:0,33,1034	0/0:15,0:15:22.46:0,22,723	0/0:12,0:12:18.06:0,18,653	0/0:31,0:30:72.20:0,72,2870	1/1:18,0:18:21.07:757,21,0	1/1:15,0:15:32.91:896,33,0	0/1:13,0:13:35.39:35,0,361	1/1:8,1:9:6.02:198,6,0
chr10	77975156	.	CGT	C	2829.25	PASS	AB=1.000;AC=46;AF=0.852;AN=54;BaseQRankSum=4.325;DP=404;FS=0.659;HRun=0;HaplotypeScore=135.2879;InbreedingCoeff=0.4745;MQ=49.27;MQ0=7;MQRankSum=-2.244;QD=8.32;ReadPosRankSum=2.318;VQSLOD=3.5576;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:74.74:0,75,1176	1/1:9,0:9:14.39:77,14,0	./.	0/0:17,0:1:0.89:0,1,2	1/1:16,0:16:2.99:23,3,0	1/1:14,0:14:11.55:64,12,0	1/1:17,0:17:11.49:63,11,0	1/1:17,0:15:16.15:168,16,0	1/1:12,0:12:10.71:58,11,0	1/1:16,0:16:23.50:156,24,0	1/1:8,0:8:2.99:24,3,0	1/1:3,2:5:8.81:59,9,0	1/1:6,0:6:13.94:125,14,0	1/1:15,0:15:20.82:104,21,0	1/1:13,0:13:8.52:43,9,0	1/1:11,0:11:20.18:114,20,0	1/1:14,0:14:8.66:49,9,0	1/1:21,1:22:46.39:443,46,0	0/1:7,0:7:7.25:7,0,19	0/1:9,0:9:15.32:16,0,15	1/1:19,0:19:6.09:39,6,0	1/1:18,0:18:15.19:256,15,0	1/1:14,1:15:14.66:145,15,0	1/1:32,1:32:67.39:629,67,0	1/1:17,0:17:20.01:102,20,0	1/1:16,0:16:25.63:141,26,0	0/0:14,0:14:10.72:0,11,58	1/1:11,0:11:9.37:63,9,0
chr10	77975157	.	G	GCA	1587.14	PASS	AB=1.000;AC=29;AF=0.537;AN=54;BaseQRankSum=-0.835;DP=407;FS=0.613;HRun=0;HaplotypeScore=139.9236;InbreedingCoeff=0.1331;MQ=49.27;MQ0=7;MQRankSum=1.514;QD=5.63;ReadPosRankSum=-2.369;VQSLOD=3.0465;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:74.94:0,75,1012	0/0:9,0:9:12.94:0,13,57	./.	0/0:17,0:1:0.89:0,1,2	0/0:16,0:16:2.24:0,2,8	0/1:14,0:14:3.26:3,0,24	0/0:17,0:17:11.22:0,11,53	0/1:17,0:15:31.79:33,0,32	0/1:12,0:12:5.55:42,0,6	0/1:16,0:16:6.07:6,0,26	0/0:8,0:8:2.37:0,2,8	1/1:2,3:5:9.02:103,9,0	1/1:5,1:6:6.95:92,7,0	0/1:15,0:15:19.13:19,0,46	0/0:13,0:13:6.15:0,6,29	0/0:11,0:11:1.44:0,1,53	0/1:14,0:14:9.51:12,0,10	1/1:9,12:22:14.31:275,14,0	0/1:7,0:7:14.84:58,0,15	1/1:10,0:10:8.49:49,8,0	1/1:19,0:19:2.62:22,3,0	1/1:17,0:18:2.29:72,2,0	1/1:6,8:15:0.24:58,0,0	1/1:8,26:33:43.41:699,43,0	1/1:17,0:17:4.95:60,5,0	0/1:16,0:16:10.09:10,0,49	1/1:13,0:14:19.27:97,19,0	0/1:11,0:11:22.43:34,0,22
chr10	77975159	.	G	GCGCGCACA	2812.39	PASS	AB=0.983;AC=26;AF=0.481;AN=54;BaseQRankSum=-0.361;DP=428;FS=1.793;HRun=0;HaplotypeScore=170.5758;InbreedingCoeff=-0.3745;MQ=50.28;MQ0=6;MQRankSum=-0.869;QD=8.35;ReadPosRankSum=-3.560;VQSLOD=2.1046;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:75.25:0,75,1809	0/1:9,0:9:53.31:53,0,147	./.	0/0:17,0:2:2.56:0,3,11	0/0:17,0:17:3:0,3,28	0/1:16,0:16:14.87:77,0,15	0/1:18,0:18:11.45:11,0,58	0/1:19,0:17:49.83:129,0,50	0/1:12,0:12:42.56:89,0,43	0/1:18,0:18:99:192,0,106	0/0:10,0:10:2.79:0,3,27	1/1:7,0:7:8.95:115,9,0	0/1:7,0:7:44.33:44,0,75	0/1:15,0:15:99:114,0,117	0/1:14,0:14:17.62:18,0,100	0/1:11,0:11:8.19:8,0,253	0/1:15,0:15:0.07:0,0,23	0/1:21,0:21:99:149,0,191	1/1:1,5:7:18.03:358,18,0	0/0:3,7:11:0:0,0,0	1/1:19,0:19:17.97:240,18,0	0/1:10,0:18:18.92:19,0,109	0/1:15,0:15:60.19:98,0,60	0/1:34,0:33:99:382,0,120	0/1:19,0:19:5.85:167,0,6	0/1:16,0:16:48.38:48,0,192	1/1:3,10:15:15.05:631,15,0	0/1:12,0:12:21.79:22,0,23
chr10	77975292	.	G	GAAC	378.35	PASS	AB=0.969;AC=13;AF=0.232;AN=56;BaseQRankSum=3.712;DP=410;FS=11.781;HRun=0;HaplotypeScore=64.8205;InbreedingCoeff=-0.2294;MQ=66.29;MQ0=3;MQRankSum=-0.252;QD=2.29;ReadPosRankSum=1.174;VQSLOD=0.4111;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:60:0,60,735	1/1:2,0:2:2.02:24,2,0	0/0:11,0:5:5.97:0,6,56	0/0:16,0:11:7.53:0,8,72	0/1:20,0:19:39.09:49,0,39	0/0:19,0:19:3.73:0,4,161	0/0:8,0:8:3.44:0,3,21	0/0:21,0:21:13.93:0,14,215	0/0:14,0:14:13.15:0,13,109	0/1:15,0:14:44.24:44,0,89	0/1:23,0:23:28.13:91,0,28	0/0:13,0:12:9.87:0,10,77	0/1:8,5:13:39.76:40,0,78	0/1:16,0:16:15.69:16,0,16	0/0:19,0:19:18.55:0,19,142	0/1:7,0:7:9.45:9,0,66	0/0:23,0:23:0.92:0,1,146	0/1:15,0:16:42.88:57,0,43	0/0:10,0:10:14.31:0,14,125	0/0:13,0:12:26.72:0,27,205	0/0:8,0:8:11.86:0,12,99	0/1:11,0:11:25.99:77,0,26	0/1:14,0:14:64.44:82,0,64	0/1:8,0:8:19.29:19,0,20	0/0:9,0:9:17.62:0,18,177	0/1:20,0:20:15.48:15,0,134	0/0:19,0:18:32.64:0,33,265	0/0:9,0:9:2.45:0,2,25
chr10	77975578	.	AGAG	A	92.49	PASS	AB=0.912;AC=8;AF=0.143;AN=56;BaseQRankSum=9.457;DP=729;FS=1.305;HRun=0;HaplotypeScore=136.6237;InbreedingCoeff=0.0642;MQ=47.45;MQ0=61;MQRankSum=-8.570;QD=0.59;ReadPosRankSum=-1.548;VQSLOD=2.1626;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:46:99:0,125,2562	1/1:6,0:6:3.09:21,3,0	0/0:12,0:4:8.24:0,8,93	0/0:18,0:10:8.37:0,8,152	0/1:32,2:32:8.71:9,0,299	0/0:24,0:21:48.16:0,48,991	0/0:54,0:46:72.16:0,72,1398	0/0:32,0:17:45.02:0,45,705	0/0:23,0:17:42.12:0,42,839	0/1:30,1:25:50.22:50,0,295	0/1:19,1:19:20.78:21,0,32	0/0:25,0:21:54.19:0,54,1131	0/0:18,0:16:38.87:0,39,705	0/1:19,1:15:9.34:9,0,76	0/0:16,0:11:30.05:0,30,523	0/0:17,0:16:36.12:0,36,753	0/0:33,0:28:60.94:0,61,1103	0/0:29,0:26:27.53:0,28,781	0/0:22,0:16:45.14:0,45,826	0/0:9,0:8:21.07:0,21,431	0/0:58,0:53:99:0,138,2706	0/0:25,0:23:48.04:0,48,870	0/0:16,0:16:39.11:0,39,726	0/0:45,0:41:77.11:0,77,1512	0/0:23,0:21:51.11:0,51,1008	0/1:33,2:28:58.23:104,0,58	0/0:20,0:16:39.59:0,40,735	0/1:7,5:9:1.38:1,0,17
chr10	77975587	.	AGAG	A	2621.62	PASS	AB=0.710;AC=11;AF=0.204;AN=54;BaseQRankSum=5.521;DP=743;FS=17.990;HRun=0;HaplotypeScore=134.7398;InbreedingCoeff=0.5702;MQ=44.50;MQ0=76;MQRankSum=-5.261;QD=15.33;ReadPosRankSum=1.559;VQSLOD=2.5127;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:52:99:0,100,2438	1/1:1,6:6:12.04:185,12,0	./.	0/0:11,1:4:3.01:0,3,60	1/1:13,25:34:6.14:507,6,0	0/0:23,0:21:45.15:0,45,874	0/0:55,0:41:81.20:0,81,1439	0/0:33,0:13:24.03:0,24,354	0/0:26,0:20:48.12:0,48,846	0/1:17,20:28:62.70:586,0,63	1/1:5,15:19:7.08:376,7,0	0/0:25,0:22:51.17:0,51,1016	0/0:18,0:16:35.84:0,36,624	1/1:6,13:15:18.06:267,18,0	0/0:21,0:14:33.04:0,33,588	0/0:18,0:17:36.11:0,36,701	0/0:36,0:30:21.36:0,21,1031	0/0:23,0:21:33.10:0,33,632	0/0:22,0:16:45.06:0,45,813	0/0:10,0:8:21.07:0,21,423	0/0:59,0:53:99:0,132,2609	0/0:26,0:21:41.64:0,42,782	0/0:14,0:14:33.10:0,33,653	0/0:45,0:41:85.38:0,85,1532	0/0:21,0:19:39.13:0,39,820	0/1:15,23:30:45.34:801,0,45	0/0:19,0:16:39.59:0,40,786	0/1:10,2:9:14.46:57,0,14
chr10	77975596	.	GGAA	G	1203.62	PASS	AB=0.987;AC=9;AF=0.167;AN=54;BaseQRankSum=7.689;DP=753;FS=13.119;HRun=0;HaplotypeScore=149.9768;InbreedingCoeff=0.0504;MQ=43.23;MQ0=91;MQRankSum=-5.635;QD=5.40;ReadPosRankSum=2.507;VQSLOD=1.4770;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:55,1:49:79.13:0,79,2499	0/1:9,0:7:5.03:88,0,5	./.	0/0:8,0:2:3.01:0,3,30	1/1:37,0:33:4.33:238,4,0	0/0:23,0:21:48.10:0,48,892	0/0:56,1:42:80.44:0,80,1488	0/0:26,0:7:21.06:0,21,351	0/0:27,0:21:45.14:0,45,927	0/1:36,0:26:99:267,0,186	0/1:22,1:21:38.96:204,0,39	0/0:24,0:20:50.74:0,51,1018	0/0:17,0:15:38.93:0,39,648	0/1:23,0:16:45:128,0,45	0/0:21,0:14:30.09:0,30,597	0/0:21,0:19:39.10:0,39,723	0/1:36,1:31:16.01:16,0,1057	0/0:22,0:20:33.08:0,33,612	0/0:21,0:14:39.13:0,39,860	0/0:13,0:10:30.08:0,30,534	0/0:64,0:56:99:0,135,2763	0/0:25,0:20:48.05:0,48,943	0/0:15,0:15:39.02:0,39,712	0/0:45,0:40:81.82:0,82,1662	0/0:21,0:19:42.12:0,42,864	0/1:44,1:32:99:380,0,207	0/0:20,0:17:42.10:0,42,821	0/1:13,0:9:15.72:20,0,16
chr10	77976126	.	T	TAGAGAGAGAG	8863.96	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-0.249;DP=707;FS=12.093;HRun=0;HaplotypeScore=174.6605;InbreedingCoeff=0.3127;MQ=62.69;MQ0=16;MQRankSum=-1.314;QD=14.07;ReadPosRankSum=-1.303;VQSLOD=2.8865;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:33:3.27:3,0,718	1/1:8,0:8:12.04:385,12,0	0/0:19,0:12:5.01:0,5,46	0/0:57,0:23:0.80:0,1,16	1/1:17,0:35:5.08:100,5,0	1/1:7,14:30:3.01:38,3,0	1/1:31,0:31:36.11:873,36,0	1/1:29,0:29:32.47:446,32,0	1/1:5,0:16:3.01:131,3,0	1/1:27,0:25:42.14:643,42,0	1/1:8,0:23:5.41:100,5,0	1/1:9,0:24:6.02:261,6,0	1/1:6,0:22:6.02:259,6,0	1/1:9,0:22:3.01:51,3,0	1/1:4,11:23:2.71:149,3,0	1/1:11,0:20:3.01:131,3,0	1/1:25,0:25:18.95:493,19,0	1/1:12,0:22:9.03:411,9,0	1/1:6,5:13:21.07:481,21,0	1/1:31,0:31:24.86:505,25,0	1/1:14,0:13:6.02:99,6,0	1/1:21,1:20:17.95:419,18,0	1/1:26,0:25:11.93:275,12,0	1/1:23,0:23:12.54:361,13,0	1/1:9,0:20:6.02:129,6,0	1/1:37,0:35:63.17:1061,63,0	1/1:25,0:26:33.11:866,33,0	1/1:14,0:22:15.05:196,15,0
chr10	77976326	.	T	TCAGGGCG	537.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.339;DP=731;FS=0.000;HRun=0;HaplotypeScore=167.9075;InbreedingCoeff=0.9818;MQ=88.26;MQ0=0;MQRankSum=-3.753;QD=89.65;ReadPosRankSum=1.548;VQSLOD=4.0244;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,151,4130	0/0:11,0:11:33.11:0,33,886	0/0:27,0:27:72.25:0,72,1855	0/0:32,0:32:93.21:0,93,2333	0/0:29,0:29:87.29:0,87,2355	0/0:27,0:27:75.26:0,75,2095	0/0:31,0:31:90.30:0,90,2410	0/0:25,0:25:72.25:0,72,1958	0/0:26,0:26:75.26:0,75,2062	0/0:26,0:26:78.27:0,78,2137	0/0:24,0:24:69.24:0,69,1929	0/0:27,0:27:78.26:0,78,2123	0/0:31,0:31:93.32:0,93,2582	0/0:37,0:37:99:0,111,3095	0/0:24,0:24:72.25:0,72,1967	0/0:26,0:26:78.27:0,78,2149	0/0:34,0:34:99:0,102,2772	1/1:2,3:6:15.05:626,15,0	0/0:18,0:18:54.19:0,54,1495	0/0:29,0:29:84.29:0,84,2310	0/0:32,0:32:90.26:0,90,2312	0/0:21,0:21:63.22:0,63,1722	0/0:18,0:18:54.19:0,54,1497	0/0:27,0:27:81.28:0,81,2228	0/0:14,0:14:42.14:0,42,1175	0/0:43,0:43:99:0,129,3561	0/0:27,0:26:75.25:0,75,2001	0/0:8,0:8:24.08:0,24,670
chr10	77977890	.	TACAC	T	1882.13	PASS	AB=1.000;AC=35;AF=0.700;AN=50;BaseQRankSum=5.055;DP=529;FS=1.902;HRun=0;HaplotypeScore=140.8178;InbreedingCoeff=0.6909;MQ=61.76;MQ0=16;MQRankSum=-3.593;QD=6.25;ReadPosRankSum=4.005;VQSLOD=2.4545;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:14.57:0,15,205	1/1:8,0:8:9.01:84,9,0	./.	./.	1/1:17,0:17:6.89:56,7,0	1/1:17,0:17:16.70:112,17,0	1/1:16,0:13:7.72:59,8,0	./.	1/1:16,0:14:12.01:112,12,0	0/1:23,0:22:0.57:116,0,1	1/1:17,0:17:11.05:89,11,0	0/0:19,0:19:5.93:0,6,57	0/0:12,0:12:6.02:0,6,99	1/1:16,0:16:23.52:204,24,0	1/1:24,0:24:14.67:101,15,0	1/1:12,0:12:14.61:121,15,0	1/1:25,0:24:15.84:113,16,0	0/0:9,0:8:2.96:0,3,45	1/1:13,2:15:6.02:92,6,0	1/1:9,5:17:2.61:234,3,0	1/1:24,4:27:6.01:92,6,0	0/0:28,0:28:20.96:0,21,341	0/0:15,0:15:6.02:0,6,104	0/0:33,0:32:27.09:0,27,455	1/1:13,0:13:14.51:121,15,0	1/1:19,0:18:18.48:164,18,0	1/1:6,3:9:5.18:70,5,0	1/1:9,0:9:12.01:111,12,0
chr10	77977895	.	A	ACACC	4596.28	PASS	AB=0.867;AC=32;AF=0.571;AN=56;BaseQRankSum=-5.473;DP=540;FS=3.789;HRun=0;HaplotypeScore=137.8963;InbreedingCoeff=0.3050;MQ=55.47;MQ0=18;MQRankSum=2.202;QD=12.13;ReadPosRankSum=-0.293;VQSLOD=4.4247;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:43:64.40:0,64,748	0/1:8,0:8:3.48:102,0,3	0/0:18,0:7:12.04:0,12,146	0/0:26,0:16:41.41:0,41,418	1/1:16,0:16:25.48:263,25,0	1/1:15,0:14:17.97:239,18,0	0/1:18,0:15:8.30:174,0,8	1/1:25,0:25:61.26:504,61,0	0/1:17,0:15:13.60:154,0,14	1/1:22,0:21:19.75:342,20,0	1/1:15,0:15:10.50:172,11,0	0/1:6,16:21:28.63:72,0,29	1/1:2,12:14:5.88:161,6,0	0/1:16,0:16:27.17:157,0,27	1/1:23,0:23:9.03:278,9,0	0/1:12,0:12:10.74:108,0,11	1/1:23,0:22:16.70:322,17,0	1/1:11,0:10:23.75:193,24,0	0/0:13,0:13:33.29:0,33,284	0/0:18,0:18:47.90:0,48,445	0/0:29,0:28:53.96:0,54,469	1/1:7,21:30:20.71:363,21,0	0/1:2,13:16:4.41:74,0,4	0/1:8,30:37:42:401,0,42	0/1:12,0:12:4.47:174,0,4	1/1:17,0:16:15.18:268,15,0	0/0:12,0:11:14.35:0,14,124	0/1:9,0:9:13.42:76,0,13
chr10	77977897	.	A	ACC	4873.32	PASS	AB=0.967;AC=39;AF=0.696;AN=56;BaseQRankSum=2.648;DP=540;FS=7.156;HRun=1;HaplotypeScore=120.7749;InbreedingCoeff=0.7202;MQ=53.69;MQ0=19;MQRankSum=-3.864;QD=13.03;ReadPosRankSum=3.568;VQSLOD=1.9872;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:44:99:0,105,853	1/1:8,0:8:20.38:139,20,0	0/0:15,0:4:12.04:0,12,146	0/0:25,0:15:40.59:0,41,414	1/1:16,0:16:34.47:276,34,0	1/1:14,0:13:35.10:263,35,0	0/1:18,0:15:8.90:201,0,9	1/1:25,0:24:61.78:507,62,0	1/1:17,0:15:30.03:226,30,0	1/1:21,0:20:52.27:398,52,0	1/1:15,0:15:29.16:203,29,0	0/1:19,1:19:22.39:28,0,22	1/1:14,0:14:5.70:72,6,0	1/1:16,0:16:35.57:226,36,0	1/1:23,0:23:26.22:331,26,0	1/1:12,0:12:23.86:151,24,0	1/1:23,0:22:47.78:370,48,0	1/1:12,0:11:21.90:191,22,0	0/0:14,0:14:35.82:0,36,284	0/0:19,0:19:47.85:0,48,380	0/0:32,0:31:56.91:0,57,468	1/1:24,2:27:20.82:301,21,0	1/1:16,0:16:5.72:53,6,0	0/1:36,2:37:10.92:281,0,11	1/1:13,0:13:30.45:225,30,0	1/1:17,0:16:41.07:313,41,0	0/0:15,0:14:23.73:0,24,186	1/1:9,0:9:19.47:118,19,0
chr10	77977900	.	CACACACACACA	C	2504.79	PASS	AB=0.780;AC=10;AF=0.179;AN=56;BaseQRankSum=9.921;DP=569;FS=4.611;HRun=0;HaplotypeScore=207.7602;InbreedingCoeff=-0.2126;MQ=51.59;MQ0=19;MQRankSum=-7.135;QD=14.82;ReadPosRankSum=6.723;VQSLOD=1.9838;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:43:99:0,114,3374	0/1:7,3:10:69.81:245,0,70	0/0:14,0:3:9.03:0,9,115	0/0:23,0:13:36.59:0,37,458	0/1:11,5:16:92.87:201,0,93	0/1:13,0:16:0.25:0,0,331	0/0:21,0:21:40.81:0,41,682	0/0:27,0:26:70.43:0,70,735	0/0:16,0:18:30.60:0,31,249	0/1:15,3:18:99:335,0,156	0/1:9,5:14:32.44:330,0,32	0/0:21,0:20:17.09:0,17,528	0/0:14,0:14:12.98:0,13,472	0/1:9,6:16:37.26:614,0,37	0/1:17,0:23:34.14:34,0,418	0/0:11,0:16:31.18:0,31,381	0/1:25,0:27:25.48:25,0,512	0/0:16,0:15:26.59:0,27,355	0/0:15,0:15:43.18:0,43,809	0/0:20,0:20:54.13:0,54,1228	0/0:33,0:32:72.24:0,72,1844	0/0:27,0:27:26.12:0,26,1147	0/0:15,0:15:8.36:0,8,418	0/0:37,0:36:33.11:0,33,1703	0/0:12,0:17:34.38:0,34,367	0/1:13,4:16:46.34:559,0,46	0/0:16,0:15:40.85:0,41,1077	0/1:5,4:9:41.76:300,0,42
chr10	77978560	.	TACACACACAC	T	2139.75	PASS	AB=0.757;AC=27;AF=0.519;AN=52;BaseQRankSum=3.309;DP=394;FS=7.207;HRun=0;HaplotypeScore=150.6457;InbreedingCoeff=0.1391;MQ=73.62;MQ0=7;MQRankSum=-5.387;QD=9.55;ReadPosRankSum=1.468;VQSLOD=1.9530;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:33:41.95:0,42,928	0/1:6,1:7:4.75:186,0,5	./.	0/0:27,0:21:8.99:0,9,88	0/1:6,4:10:28.38:74,0,28	1/1:8,7:15:3.01:90,3,0	1/1:15,1:19:6.02:132,6,0	1/1:15,0:14:9.15:52,9,0	1/1:11,2:13:11.92:219,12,0	0/1:7,0:12:17.74:18,0,64	1/1:12,0:15:3.01:34,3,0	0/1:8,0:10:24.11:45,0,24	0/1:5,0:11:18.45:18,0,33	0/1:9,0:17:1.93:188,0,2	0/1:10,2:12:6.27:137,0,6	1/1:7,5:13:24.53:535,25,0	1/1:7,6:14:1.42:233,1,0	1/1:4,0:8:3.01:39,3,0	0/0:8,0:7:5.14:0,5,107	0/0:11,0:11:14.99:0,15,418	0/0:29,0:28:51.16:0,51,1822	0/1:9,0:17:17.89:18,0,34	0/0:7,0:7:2.60:0,3,10	0/0:5,0:13:5.04:0,5,29	1/1:3,1:5:3.01:90,3,0	0/1:8,2:10:18.06:196,0,18	0/0:13,0:13:21:0,21,765	./.
chr10	77978562	.	C	CAT	3978.90	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=3.378;DP=389;FS=14.130;HRun=0;HaplotypeScore=93.5709;InbreedingCoeff=0.9203;MQ=73.47;MQ0=9;MQRankSum=-2.307;QD=16.44;ReadPosRankSum=0.368;VQSLOD=2.8946;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:47.98:0,48,486	1/1:7,0:7:4.81:99,5,0	0/0:26,0:17:50.75:0,51,495	0/0:27,0:21:56.67:0,57,491	1/1:10,0:10:20.96:176,21,0	1/1:15,0:15:22.43:167,22,0	1/1:19,0:19:40.18:324,40,0	1/1:16,0:14:41.85:344,42,0	1/1:10,0:10:23.43:174,23,0	1/1:11,0:11:15:132,15,0	1/1:14,0:14:29.94:245,30,0	0/0:10,0:10:23.85:0,24,185	0/0:11,0:10:17.94:0,18,139	1/1:16,0:16:18.76:177,19,0	1/1:12,0:12:31.21:252,31,0	1/1:11,0:11:18.99:117,19,0	1/1:13,0:13:22.40:152,22,0	1/1:8,0:8:13.99:100,14,0	1/1:9,0:8:14.68:110,15,0	1/1:8,1:9:16.03:244,16,0	1/1:25,4:28:15.47:553,15,0	0/0:16,0:16:11.37:0,11,198	0/0:7,0:7:14.54:0,15,122	0/0:13,0:13:14.96:0,15,120	1/1:6,0:5:10.23:77,10,0	1/1:10,0:10:15.20:126,15,0	1/1:1,14:15:21.02:361,21,0	1/1:2,0:2:5.99:48,6,0
chr10	77979987	.	C	CAAGG	32134.63	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-8.236;DP=644;FS=8.252;HRun=0;HaplotypeScore=113.1829;InbreedingCoeff=0.9938;MQ=92.03;MQ0=3;MQRankSum=-10.492;QD=59.29;ReadPosRankSum=5.273;VQSLOD=6.6805;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.24:0,84,1483	1/1:1,9:10:16.10:509,16,0	0/0:36,0:36:90.25:0,90,1535	0/0:36,0:33:66.68:0,67,1176	1/1:2,26:29:77.80:1565,78,0	1/1:1,16:17:33.11:848,33,0	1/1:2,24:27:66.23:1715,66,0	1/1:4,18:22:66.18:1527,66,0	1/1:1,19:20:51.18:1356,51,0	1/1:4,20:24:69.15:1641,69,0	1/1:2,11:14:30.87:617,31,0	1/1:1,24:25:66.21:1701,66,0	1/1:1,22:23:66.18:1676,66,0	1/1:2,15:16:36.04:839,36,0	1/1:3,21:25:54.03:1209,54,0	1/1:1,21:22:57.16:1438,57,0	1/1:5,20:25:51.18:1307,51,0	1/1:1,14:15:36.08:878,36,0	1/1:3,17:23:57.18:1413,57,0	1/1:2,13:16:42.02:984,42,0	1/1:2,34:38:90.15:2144,90,0	1/1:4,20:24:51.02:1177,51,0	1/1:2,18:20:51.04:1180,51,0	1/1:5,19:23:51.13:1315,51,0	1/1:1,18:18:47.94:1052,48,0	1/1:5,25:31:87.22:1990,87,0	1/1:2,21:23:63.09:1493,63,0	1/1:0,8:8:21.07:560,21,0
chr10	77980019	.	ATG	A	729.18	PASS	AB=0.983;AC=26;AF=0.520;AN=50;BaseQRankSum=1.793;DP=661;FS=8.069;HRun=0;HaplotypeScore=169.6209;InbreedingCoeff=0.0693;MQ=59.25;MQ0=17;MQRankSum=1.509;QD=1.63;ReadPosRankSum=0.069;VQSLOD=2.0811;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:3.14:3,0,122	0/0:10,0:10:13.84:0,14,150	./.	./.	0/1:24,0:24:15.66:16,0,155	0/1:20,1:21:44.89:65,0,45	0/1:28,0:28:24.27:24,0,76	0/0:23,0:23:3.92:0,4,14	0/1:24,1:25:19.66:20,0,89	0/1:26,0:25:14.21:14,0,87	0/1:18,0:17:47.33:47,0,59	1/1:19,2:21:6.49:65,6,0	1/1:20,1:21:8.56:79,9,0	0/0:17,0:17:15.04:0,15,183	0/0:22,0:21:21.03:0,21,237	0/0:28,0:28:5.11:0,5,127	0/1:26,0:24:4.16:4,0,131	./.	1/1:22,0:22:1.82:5,2,0	1/1:19,0:18:2.45:7,2,0	0/1:53,3:54:28.84:141,0,29	1/1:24,0:23:5.23:38,5,0	1/1:25,1:24:7.08:98,7,0	1/1:22,1:23:11.69:91,12,0	0/0:17,0:15:12:0,12,134	0/0:32,0:32:6.36:0,6,207	1/1:19,3:22:5.14:144,5,0	0/1:13,0:13:6.52:25,0,7
chr10	77982561	.	TA	T	5803.32	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.580;DP=738;FS=3.393;HRun=2;HaplotypeScore=74.4978;InbreedingCoeff=0.9878;MQ=88.92;MQ0=0;MQRankSum=0.108;QD=34.54;ReadPosRankSum=2.550;VQSLOD=5.4142;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,2042	0/0:9,0:9:27.08:0,27,386	0/0:24,0:24:66.22:0,66,937	0/0:29,0:29:77.85:0,78,1095	0/0:25,0:25:72.22:0,72,1042	0/0:28,0:28:81.25:0,81,1175	0/0:32,0:32:96.33:0,96,1436	0/0:26,0:26:75.24:0,75,1088	0/0:20,0:20:57.18:0,57,818	0/0:22,0:22:66.22:0,66,989	0/0:26,0:26:75.20:0,75,1073	1/1:0,32:32:93.30:1207,93,0	1/1:1,20:21:54.18:701,54,0	0/0:30,0:30:90.30:0,90,1347	0/0:20,0:20:60.17:0,60,842	0/0:19,0:19:57.19:0,57,854	0/0:32,0:32:93.31:0,93,1388	1/1:0,23:23:63.20:818,63,0	0/0:29,0:29:84.28:0,84,1258	0/0:30,0:30:87.23:0,87,1240	0/0:51,0:51:99:0,144,2135	1/1:1,23:24:66.21:857,66,0	1/1:0,24:24:63.20:818,63,0	1/1:1,43:44:99:1402,108,0	0/0:9,0:9:27.09:0,27,405	0/0:38,0:38:99:0,111,1638	0/0:21,0:20:63.21:0,63,944	0/0:4,0:4:9:0,9,111
chr10	77982928	.	TTCTA	T	3559.54	PASS	AB=0.944;AC=31;AF=0.620;AN=50;BaseQRankSum=4.151;DP=678;FS=4.451;HRun=0;HaplotypeScore=152.8722;InbreedingCoeff=0.7577;MQ=77.68;MQ0=2;MQRankSum=0.042;QD=9.97;ReadPosRankSum=0.846;VQSLOD=2.5435;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:44.08:0,44,932	1/1:1,0:7:2.94:18,3,0	./.	./.	1/1:14,0:34:2.86:24,3,0	0/0:21,0:21:24.07:0,24,500	0/0:10,0:10:6.02:0,6,80	./.	0/0:18,0:18:39.10:0,39,785	1/1:19,0:28:26.06:229,26,0	0/0:16,0:26:0.46:0,0,1	1/1:9,3:12:14.94:198,15,0	1/1:11,15:26:30.10:465,30,0	1/1:9,0:23:2.53:18,3,0	0/1:16,1:17:6.82:7,0,779	0/0:10,0:22:12.04:0,12,209	0/0:11,0:19:12.02:0,12,181	0/0:29,0:29:39.08:0,39,776	1/1:8,5:13:15.05:218,15,0	1/1:17,9:26:20.69:271,21,0	1/1:10,16:26:21.07:322,21,0	1/1:8,10:18:12.04:184,12,0	1/1:15,10:25:45.14:663,45,0	1/1:15,1:16:6.02:92,6,0	0/0:18,0:33:21.07:0,21,353	1/1:19,7:26:24.07:342,24,0	1/1:20,15:35:18.06:276,18,0	1/1:10,0:23:26.95:233,27,0
chr10	77983189	.	T	TA	3669.03	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=6.769;DP=624;FS=0.636;HRun=6;HaplotypeScore=143.4300;InbreedingCoeff=0.6678;MQ=61.45;MQ0=9;MQRankSum=-0.910;QD=6.39;ReadPosRankSum=0.574;VQSLOD=-0.0062;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:98.97:0,99,966	1/1:10,0:10:9.11:49,9,0	0/1:28,0:12:14.39:14,0,45	0/0:15,0:12:16.75:0,17,95	1/1:27,0:27:36.71:286,37,0	1/1:18,0:18:9.44:23,9,0	1/1:14,0:14:15.98:83,16,0	1/1:27,0:27:44.73:397,45,0	1/1:19,0:19:14.22:60,14,0	1/1:36,0:36:48.90:373,49,0	1/1:19,0:19:19.36:101,19,0	1/1:20,0:20:16.71:68,17,0	1/1:20,0:20:17.44:43,17,0	1/1:22,0:22:16.66:58,17,0	1/1:22,0:22:15.86:96,16,0	1/1:24,0:24:20.46:44,20,0	1/1:25,0:25:14.95:31,15,0	1/1:2,23:25:52.41:628,52,0	1/1:13,0:13:24.42:240,24,0	1/1:36,0:36:50.54:332,51,0	1/1:10,0:9:7.63:45,8,0	1/1:19,0:20:23.01:198,23,0	1/1:23,0:23:23.46:112,23,0	1/1:14,0:14:9.61:24,10,0	1/1:25,0:25:17.19:38,17,0	1/1:33,0:33:43.45:242,43,0	1/1:32,0:32:25.20:55,25,0	1/1:12,0:12:13.35:29,13,0
chr10	77983194	.	AACAAC	A	18853.08	PASS	AB=0.737;AC=40;AF=0.714;AN=56;BaseQRankSum=-6.487;DP=626;FS=7.487;HRun=0;HaplotypeScore=126.1115;InbreedingCoeff=0.8190;MQ=58.44;MQ0=10;MQRankSum=-1.404;QD=40.37;ReadPosRankSum=-1.104;VQSLOD=4.4833;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,2813	1/1:0,11:11:21.07:427,21,0	0/0:29,0:12:27.85:0,28,585	0/0:11,0:9:25.96:0,26,401	1/1:0,29:29:84.14:1385,84,0	1/1:1,18:19:39.13:842,39,0	1/1:0,14:14:30.10:646,30,0	1/1:3,26:29:75.20:1193,75,0	1/1:0,17:17:30.10:628,30,0	1/1:3,32:35:93.30:1722,93,0	1/1:1,17:18:45.05:834,45,0	0/0:2,0:21:34.22:0,34,177	0/0:0,0:23:40.22:0,40,212	1/1:2,18:20:32.90:625,33,0	1/1:1,23:24:42.61:851,43,0	1/1:0,26:26:51.18:1117,51,0	1/1:0,23:23:36.12:789,36,0	0/1:24,1:25:99:117,0,802	1/1:2,9:11:30.09:478,30,0	1/1:0,34:34:93.28:1783,93,0	1/1:1,8:8:15.05:297,15,0	0/1:1,0:20:99:129,0,193	0/0:0,0:23:17.36:0,17,208	0/0:0,0:15:23.03:0,23,123	1/1:0,24:25:45.15:962,45,0	1/1:0,33:33:99:1869,99,0	1/1:0,33:33:65.81:1438,66,0	1/1:0,12:12:33.11:723,33,0
chr10	77983458	.	GT	G	1204.74	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.316;DP=784;FS=5.716;HRun=1;HaplotypeScore=78.5999;InbreedingCoeff=0.9694;MQ=82.22;MQ0=0;MQRankSum=-4.423;QD=37.65;ReadPosRankSum=0.611;VQSLOD=4.1055;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,2078	0/0:4,0:4:12.04:0,12,191	0/0:29,0:29:87.24:0,87,1296	0/0:25,0:25:75.11:0,75,1077	0/0:20,0:20:53.82:0,54,849	0/0:22,0:22:66.23:0,66,1052	0/0:21,0:21:63.21:0,63,1006	0/0:30,0:30:87.28:0,87,1331	0/0:24,0:24:72.22:0,72,1122	0/0:37,0:37:99:0,111,1729	0/0:18,0:18:51.15:0,51,761	0/0:36,0:36:99:0,108,1642	0/0:30,0:30:87.30:0,87,1379	0/0:30,0:30:90.28:0,90,1383	0/0:25,0:25:75.24:0,75,1176	0/0:31,0:31:93.30:0,93,1458	0/0:32,0:32:93.29:0,93,1460	1/1:0,32:32:93.31:1300,93,0	0/0:26,0:26:78.15:0,78,1168	0/0:29,0:29:81.26:0,81,1267	0/0:58,0:58:99:0,168,2584	0/0:17,0:17:51.17:0,51,789	0/0:28,0:28:78.27:0,78,1232	0/0:42,0:42:99:0,126,2009	0/0:25,0:25:75.26:0,75,1193	0/0:29,0:29:87.28:0,87,1365	0/0:29,0:29:87.28:0,87,1366	0/0:10,0:10:27.04:0,27,402
chr10	77984423	.	GGATT	G	13774.45	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=16.688;DP=645;FS=3.067;HRun=0;HaplotypeScore=122.9384;InbreedingCoeff=0.9968;MQ=88.42;MQ0=0;MQRankSum=-9.466;QD=45.46;ReadPosRankSum=0.640;VQSLOD=4.9917;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,138,3661	0/0:5,0:5:15.05:0,15,402	0/0:21,0:21:47.40:0,47,1322	0/0:29,0:29:81.15:0,81,1892	0/0:34,0:34:90.31:0,90,2362	1/1:0,13:13:27.09:513,27,0	1/1:2,15:17:36.08:646,36,0	1/1:2,29:31:87.30:1621,87,0	1/1:0,19:19:48.12:874,48,0	0/0:32,0:32:90.30:0,90,2358	0/0:20,0:20:60.21:0,60,1589	0/0:18,0:18:54.19:0,54,1369	0/0:25,0:25:72.25:0,72,1944	0/0:13,0:13:39.13:0,39,992	1/1:0,17:17:48.12:874,48,0	1/1:0,27:27:78.22:1443,78,0	1/1:1,32:33:78.27:1481,78,0	1/1:0,12:12:24.04:416,24,0	1/1:2,16:18:48.15:862,48,0	1/1:0,23:23:57.15:1042,57,0	1/1:2,33:35:78.27:1481,78,0	0/0:23,0:23:63.22:0,63,1701	0/0:17,0:17:48.15:0,48,1207	0/0:24,0:24:69.23:0,69,1772	1/1:0,25:25:57.20:1077,57,0	0/0:23,0:23:69.24:0,69,1837	1/1:2,30:33:78.22:1444,78,0	0/0:7,0:7:21.07:0,21,567
chr10	77985008	.	A	ATTT	8381.29	PASS	AB=0.707;AC=37;AF=0.661;AN=56;BaseQRankSum=-0.954;DP=612;FS=2.694;HRun=13;HaplotypeScore=114.4049;InbreedingCoeff=0.4496;MQ=72.94;MQ0=1;MQRankSum=-1.992;QD=17.14;ReadPosRankSum=-2.791;VQSLOD=3.2485;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:71.65:0,72,773	1/1:5,5:10:6.02:107,6,0	0/1:16,0:12:12.42:12,0,73	0/1:13,0:12:0.09:0,0,69	1/1:11,22:43:98.94:1312,99,0	1/1:2,18:28:66.07:964,66,0	1/1:0,9:12:25.28:369,25,0	1/1:16,8:27:42.68:587,43,0	1/1:7,10:20:26.11:382,26,0	1/1:10,11:27:54.03:703,54,0	1/1:9,4:23:39.44:472,39,0	0/1:6,0:20:9.70:10,0,19	0/1:7,0:20:37.90:38,0,46	1/1:10,2:23:22.25:282,22,0	1/1:3,11:19:27.07:431,27,0	1/1:7,9:20:24.04:351,24,0	1/1:10,17:29:30.57:522,31,0	0/0:12,0:14:2.17:0,2,232	0/0:13,0:14:32.82:0,33,340	0/0:16,0:22:42.90:0,43,423	0/0:18,0:20:11.73:0,12,307	0/1:11,0:24:25:25,0,72	0/1:5,0:20:30.21:30,0,41	0/1:6,0:20:7.78:8,0,70	1/1:7,12:24:31.30:461,31,0	1/1:8,15:27:60.02:819,60,0	0/0:15,0:19:28.20:0,28,305	1/1:5,9:20:6.76:496,7,0
chr10	77985618	.	T	TAATA	5900.27	PASS	AB=0.667;AC=17;AF=0.304;AN=56;BaseQRankSum=13.658;DP=522;FS=0.000;HRun=0;HaplotypeScore=143.0998;InbreedingCoeff=0.9128;MQ=76.60;MQ0=0;MQRankSum=-13.349;QD=52.21;ReadPosRankSum=3.653;VQSLOD=5.4064;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.26:0,81,1610	0/0:24,0:24:72.23:0,72,1456	0/0:20,0:21:48.16:0,48,932	0/0:8,0:8:20.10:0,20,382	0/0:26,0:26:72.24:0,72,1447	0/0:20,0:20:60.21:0,60,1242	0/0:21,0:21:60.17:0,60,1145	0/0:31,0:31:93.30:0,93,1821	0/0:26,0:26:78.25:0,78,1584	0/0:24,0:24:66.19:0,66,1333	0/0:15,0:15:45.13:0,45,848	1/1:3,6:9:17.78:403,18,0	1/1:6,11:17:24.29:937,24,0	0/0:16,0:16:48.14:0,48,922	0/0:25,0:25:72.20:0,72,1364	0/0:24,0:24:72.22:0,72,1420	0/0:22,0:22:66.21:0,66,1345	0/0:9,0:9:24.08:0,24,479	1/1:3,5:8:19.06:456,19,0	1/1:1,14:17:45.11:970,45,0	1/1:3,2:5:6.78:188,7,0	1/1:6,12:18:42.13:875,42,0	1/1:0,8:11:27.05:552,27,0	0/1:2,2:4:6.29:34,0,6	0/0:23,0:23:69.23:0,69,1377	0/0:36,0:36:99:0,108,2147	1/1:4,20:24:66.51:1485,67,0	0/0:9,0:9:27.09:0,27,566
chr10	77985619	.	G	GAAGGGTACTGTGT	24319.75	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.369;DP=585;FS=2.525;HRun=0;HaplotypeScore=232.5175;InbreedingCoeff=0.9972;MQ=73.72;MQ0=0;MQRankSum=-15.756;QD=138.18;ReadPosRankSum=1.173;VQSLOD=4.9136;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.26:0,87,3370	0/0:24,0:24:72.25:0,72,2882	0/0:20,0:21:47.98:0,48,1719	0/0:9,0:9:21.04:0,21,711	0/0:26,0:26:78.08:0,78,2880	0/0:21,0:21:60.21:0,60,2441	0/0:21,0:21:63.19:0,63,2318	0/0:31,0:31:93.31:0,93,3595	0/0:26,0:26:78.27:0,78,3167	0/0:24,0:24:63.21:0,63,2500	0/0:15,0:15:45.15:0,45,1695	1/1:11,6:17:48.14:2412,48,0	1/1:14,11:26:75.15:3593,75,0	0/0:17,0:17:48.16:0,48,1828	0/0:25,0:25:75.23:0,75,2689	0/0:23,0:23:69.22:0,69,2689	0/0:21,0:21:63.22:0,63,2592	0/0:9,0:9:24.04:0,24,879	1/1:5,5:11:32.13:1452,32,0	1/1:12,13:26:72.20:4001,72,0	1/1:10,2:12:18.04:794,18,0	1/1:15,12:27:66.17:3672,66,0	1/1:7,8:15:33.11:2049,33,0	1/1:8,2:10:24.05:1128,24,0	0/0:23,0:23:69.24:0,69,2760	0/0:35,0:35:99:0,105,4234	1/1:11,19:32:96.29:5219,96,0	0/0:9,0:9:27.09:0,27,1132
chr10	77986427	.	CATT	C	4171.38	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=11.749;DP=441;FS=1.036;HRun=0;HaplotypeScore=65.9498;InbreedingCoeff=0.9370;MQ=78.87;MQ0=1;MQRankSum=-1.703;QD=34.47;ReadPosRankSum=1.243;VQSLOD=4.0755;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.25:0,72,1637	0/0:9,0:9:27.09:0,27,599	0/0:14,0:13:38.86:0,39,739	0/1:15,0:14:4.42:4,0,542	0/0:16,0:16:48.16:0,48,1104	0/0:28,0:28:81.28:0,81,1864	0/0:9,0:9:21.07:0,21,484	0/0:34,0:34:99:0,102,2223	0/0:10,0:10:27.06:0,27,572	0/0:16,0:16:48.16:0,48,1107	0/0:15,0:15:45.15:0,45,1019	1/1:0,10:10:27.09:459,27,0	1/1:0,13:13:33.11:562,33,0	0/0:11,0:11:27.08:0,27,579	0/0:19,0:19:54.19:0,54,1228	0/0:18,0:18:54.17:0,54,1202	0/0:17,0:17:48.16:0,48,1086	0/0:25,0:25:72.21:0,72,1608	1/1:0,11:9:27.06:422,27,0	1/1:2,10:12:27.09:460,27,0	1/1:0,11:11:21.07:355,21,0	1/1:0,8:8:17.98:272,18,0	1/1:1,13:14:30.10:511,30,0	1/1:1,11:12:27.09:460,27,0	0/0:25,0:25:72.23:0,72,1556	0/0:17,0:17:51.17:0,51,1133	1/1:1,14:15:39.13:665,39,0	0/0:8,0:8:24.08:0,24,503
chr10	77986730	.	TACACAC	T	1630.27	PASS	AB=0.808;AC=26;AF=0.500;AN=52;BaseQRankSum=1.825;DP=540;FS=9.729;HRun=0;HaplotypeScore=111.5398;InbreedingCoeff=0.6411;MQ=59.79;MQ0=11;MQRankSum=-3.947;QD=6.94;ReadPosRankSum=0.842;VQSLOD=1.2382;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:36:41.92:0,42,1051	1/1:6,2:8:6.02:116,6,0	./.	./.	1/1:4,2:8:5.99:82,6,0	0/1:11,2:13:4.04:154,0,4	1/1:21,5:27:12:179,12,0	0/0:22,0:20:3.01:0,3,45	1/1:10,6:17:9.03:157,9,0	1/1:9,1:9:3.01:40,3,0	1/1:14,0:14:3.01:40,3,0	0/0:19,0:22:15.05:0,15,322	0/0:14,0:19:12.02:0,12,244	1/1:25,0:24:3.48:42,3,0	1/1:27,1:30:18:223,18,0	1/1:9,2:11:3.01:61,3,0	1/1:16,8:25:15.05:272,15,0	0/0:13,0:22:21.07:0,21,504	0/0:7,0:8:6.91:0,7,161	0/0:15,0:18:11.16:0,11,274	0/0:28,0:28:45.04:0,45,913	0/0:18,0:18:12.02:0,12,219	0/0:14,0:14:12.04:0,12,274	0/0:24,0:37:48.16:0,48,1273	0/1:14,6:21:3.19:282,0,3	1/1:16,3:18:7.28:123,7,0	0/0:16,0:18:12.03:0,12,252	1/1:6,0:6:3.01:40,3,0
chr10	77994033	.	ATGTGCG	A	1376.15	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.367;DP=850;FS=0.000;HRun=0;HaplotypeScore=213.6960;InbreedingCoeff=0.9643;MQ=56.72;MQ0=11;MQRankSum=-1.749;QD=5.10;ReadPosRankSum=3.163;VQSLOD=1.9526;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:55:99:0,147,3082	0/0:12,0:12:35.88:0,36,658	0/0:45,0:18:35.24:0,35,297	0/0:46,0:20:2.86:0,3,264	0/0:23,0:23:64.84:0,65,1240	0/0:22,0:22:49.57:0,50,1057	0/0:33,0:32:60.25:0,60,1491	0/0:36,0:35:92.68:0,93,1361	0/0:19,0:19:45.01:0,45,880	0/0:28,0:28:82.52:0,83,1803	0/0:17,0:17:48.11:0,48,1433	1/1:21,0:21:18.50:71,18,0	1/1:35,1:36:44.69:268,45,0	0/0:26,0:25:60.12:0,60,1319	0/0:32,0:32:83.84:0,84,1565	0/0:17,0:16:17.85:0,18,712	0/0:47,0:47:99:0,120,2752	0/0:39,0:40:99:0,105,2416	1/1:16,2:17:44.12:399,44,0	1/1:20,1:21:25.13:104,25,0	1/1:49,1:49:33.19:131,33,0	1/1:23,1:24:13.64:55,14,0	1/1:29,0:29:17.35:67,17,0	1/1:48,3:51:70.37:309,70,0	0/0:31,0:31:79.37:0,79,1669	0/0:32,0:31:89.53:0,90,1659	1/1:19,0:20:23.38:185,23,0	0/0:16,0:16:39.04:0,39,912
chr10	77994034	.	TGTGC	T	5429.51	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=7.610;DP=845;FS=0.753;HRun=0;HaplotypeScore=172.3971;InbreedingCoeff=0.9348;MQ=55.86;MQ0=11;MQRankSum=0.179;QD=20.26;ReadPosRankSum=2.255;VQSLOD=4.4967;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:54:99:0,147,2420	0/0:12,0:12:35.65:0,36,544	0/0:43,0:16:37.77:0,38,352	0/0:44,0:19:2.81:0,3,239	0/0:24,0:24:44.64:0,45,994	0/0:22,0:22:49.58:0,50,809	0/0:33,0:32:69.42:0,69,1067	0/0:35,0:34:28.10:0,28,953	0/0:19,0:19:36.85:0,37,628	0/0:29,0:29:54.54:0,55,1504	0/0:17,0:17:48.13:0,48,1166	1/1:4,17:21:21.54:389,22,0	1/1:5,31:36:52.96:882,53,0	0/0:26,0:25:59.79:0,60,1079	0/0:32,0:32:83.33:0,83,1267	0/0:17,0:16:1.56:0,2,487	0/0:47,0:47:99:0,113,1968	0/0:41,0:40:57.42:0,57,1901	1/1:15,2:16:44.78:423,45,0	1/1:3,17:20:33.03:533,33,0	1/1:9,41:49:37.14:686,37,0	1/1:2,22:24:14.32:284,14,0	1/1:4,25:29:20.45:368,20,0	1/1:7,44:51:80.38:1467,80,0	0/0:31,0:31:76.86:0,77,1199	0/0:32,0:31:61.29:0,61,1359	1/1:2,18:20:26.82:398,27,0	0/0:16,0:16:39.06:0,39,814
chr10	77994036	.	TGC	T	2221.60	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=12.759;DP=829;FS=0.000;HRun=0;HaplotypeScore=155.2041;InbreedingCoeff=0.8446;MQ=55.94;MQ0=11;MQRankSum=2.403;QD=7.71;ReadPosRankSum=4.166;VQSLOD=3.0855;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:52:52.50:0,53,1619	0/0:12,0:12:21.12:0,21,356	0/0:41,0:15:37.76:0,38,340	0/0:44,0:18:2.84:0,3,215	0/0:24,0:24:43.95:0,44,758	0/0:22,0:22:49.56:0,50,573	0/0:33,0:32:54.68:0,55,821	0/0:34,0:33:74.96:0,75,877	0/0:19,0:19:30.92:0,31,433	0/0:29,0:29:75.35:0,75,1131	0/0:17,0:17:51.11:0,51,849	1/1:19,2:21:21.39:162,21,0	1/1:33,1:34:44.24:370,44,0	0/1:26,0:25:8.67:9,0,690	0/0:34,0:34:70.04:0,70,986	0/0:17,0:16:1.83:0,2,356	0/0:45,0:45:99:0,119,1370	0/0:39,0:38:6.32:0,6,1287	1/1:18,0:17:47.68:356,48,0	1/1:19,1:20:32.74:237,33,0	1/1:49,0:48:37.11:279,37,0	1/1:23,0:23:15.17:115,15,0	1/1:26,1:27:20.49:156,20,0	1/1:48,1:49:70.09:585,70,0	0/0:30,0:30:78.74:0,79,840	0/0:32,0:31:44.05:0,44,940	1/1:21,0:21:9.10:162,9,0	0/0:14,0:14:19.43:0,19,551
chr10	77994038	.	C	CGT	2791.36	PASS	AB=0.806;AC=11;AF=0.204;AN=54;BaseQRankSum=-6.855;DP=844;FS=4.034;HRun=0;HaplotypeScore=158.3459;InbreedingCoeff=-0.2735;MQ=55.15;MQ0=12;MQRankSum=-1.253;QD=9.59;ReadPosRankSum=-2.459;VQSLOD=2.9694;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:53:46.84:0,47,783	0/1:12,0:13:1.89:2,0,132	0/0:44,0:17:5.80:0,6,63	./.	0/0:24,0:25:29.89:0,30,319	0/1:12,10:22:61.02:313,0,61	0/1:21,14:35:99:413,0,115	0/1:28,5:32:79.65:244,0,80	0/1:11,9:21:43.30:166,0,43	0/0:29,0:31:49.94:0,50,537	0/0:17,0:17:45.11:0,45,498	0/0:21,0:21:4.25:0,4,62	0/0:36,0:36:1.69:0,2,120	0/0:25,0:28:47.35:0,47,445	0/0:30,0:32:35.51:0,36,378	0/1:8,8:16:13.05:264,0,13	0/1:22,26:48:99:873,0,154	0/0:35,0:38:77.84:0,78,777	0/1:17,0:16:13.58:14,0,40	0/1:21,0:21:19.77:20,0,55	0/0:46,0:45:21.38:0,21,128	0/0:23,0:23:3.03:0,3,40	0/0:26,0:26:16.28:0,16,77	0/0:50,0:50:26.03:0,26,270	0/1:14,17:31:53.73:592,0,54	0/1:28,1:31:30.89:31,0,381	0/0:21,0:21:10.62:0,11,103	0/0:13,0:14:35.93:0,36,385
chr10	77995636	.	A	AC	9955.99	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-3.859;DP=707;FS=0.299;HRun=0;HaplotypeScore=70.8842;InbreedingCoeff=0.9997;MQ=74.50;MQ0=0;MQRankSum=-0.558;QD=42.01;ReadPosRankSum=1.837;VQSLOD=5.4822;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.17:0,51,705	0/0:16,0:16:45.15:0,45,628	0/0:16,0:16:47.62:0,48,603	0/0:9,0:9:27.09:0,27,374	0/0:38,0:38:99:0,111,1532	0/0:34,0:34:99:0,99,1380	0/0:24,0:24:69.23:0,69,958	0/0:35,0:35:99:0,99,1353	0/0:30,0:30:90.30:0,90,1257	0/0:30,0:30:90.29:0,90,1245	0/0:30,0:30:84.26:0,84,1141	1/1:1,28:29:69.24:1103,69,0	1/1:0,33:33:87.30:1391,87,0	0/0:27,0:27:81.26:0,81,1116	0/0:27,0:27:81.24:0,81,1096	0/0:28,0:28:84.25:0,84,1141	0/0:27,0:27:81.23:0,81,1092	0/0:19,0:19:51.17:0,51,707	1/1:0,18:18:54.18:854,54,0	1/1:0,29:29:78.26:1205,78,0	1/1:2,25:27:72.25:1151,72,0	1/1:0,29:29:78.26:1232,78,0	1/1:1,27:29:78.27:1246,78,0	1/1:0,16:16:42.14:671,42,0	0/0:29,0:29:87.29:0,87,1208	0/0:24,0:24:72.23:0,72,991	1/1:1,26:27:69.24:1103,69,0	0/0:10,0:10:30.10:0,30,420
chr10	77996012	.	G	GGAGGAGGAA	22534.46	PASS	AB=0.692;AC=49;AF=0.875;AN=56;BaseQRankSum=-7.622;DP=528;FS=6.057;HRun=0;HaplotypeScore=105.2184;InbreedingCoeff=0.4898;MQ=65.72;MQ0=2;MQRankSum=-5.251;QD=49.09;ReadPosRankSum=2.411;VQSLOD=4.3181;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:38.02:0,38,2465	1/1:2,8:10:15.05:514,15,0	0/0:30,0:25:28.28:0,28,728	0/1:24,0:18:7.86:8,0,329	1/1:4,12:19:15.05:567,15,0	1/1:1,12:11:12.04:547,12,0	1/1:3,15:20:15.05:705,15,0	1/1:15,0:14:19.53:517,20,0	1/1:7,1:8:12:306,12,0	1/1:1,19:21:51.12:1727,51,0	1/1:0,13:14:15.05:686,15,0	1/1:3,15:18:24.08:1134,24,0	1/1:3,17:24:18.06:851,18,0	1/1:4,8:12:15.05:708,15,0	0/1:4,15:19:7.84:576,0,8	1/1:1,9:9:12.04:567,12,0	1/1:7,11:22:18.06:790,18,0	1/1:9,0:9:17.95:398,18,0	1/1:3,12:17:45.13:1540,45,0	1/1:3,23:29:35.67:1565,36,0	1/1:2,12:17:9.03:418,9,0	1/1:1,29:32:56.97:2160,57,0	1/1:4,14:22:24.08:999,24,0	0/1:7,12:23:10.99:529,0,11	1/1:1,21:23:33.11:1559,33,0	1/1:5,17:23:53.59:2259,54,0	1/1:2,6:8:18.06:851,18,0	1/1:3,0:3:6:50,6,0
chr10	77997551	.	CTTCTCTCTCTCTCCT	C	820.33	PASS	AB=1.000;AC=13;AF=0.250;AN=52;BaseQRankSum=6.410;DP=453;FS=0.000;HRun=0;HaplotypeScore=153.6285;InbreedingCoeff=0.7079;MQ=69.17;MQ0=23;MQRankSum=-3.037;QD=8.82;ReadPosRankSum=-0.273;VQSLOD=2.3407;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:60.17:0,60,2227	0/0:11,0:10:30.09:0,30,923	0/0:34,0:16:32.25:0,32,700	0/0:48,0:17:44.80:0,45,646	0/0:22,0:22:66.19:0,66,1459	0/0:15,0:15:36.47:0,36,1073	0/0:19,0:19:51.55:0,52,1331	0/0:33,0:32:96.26:0,96,1899	0/0:11,0:11:33.09:0,33,1224	0/0:22,0:22:56.50:0,56,1571	0/0:12,0:12:36.10:0,36,667	1/1:1,1:11:3.01:97,3,0	1/1:1,0:13:6.02:265,6,0	0/0:21,0:19:48.01:0,48,1619	0/0:10,0:10:30.10:0,30,823	0/0:8,0:8:15.52:0,16,442	0/0:10,0:9:27.08:0,27,971	0/1:9,0:6:12.54:30,0,13	1/1:0,0:12:32.92:479,33,0	1/1:0,0:11:5.90:37,6,0	./.	./.	0/0:0,11:11:0.47:0,0,1	1/1:4,18:20:0.89:2,1,0	0/0:13,0:12:36.03:0,36,999	0/0:11,0:11:33.10:0,33,784	1/1:1,0:13:3.01:58,3,0	0/0:12,0:12:36.08:0,36,667
chr10	77997563	.	TC	T	261.52	PASS	AB=0.923;AC=13;AF=0.271;AN=48;BaseQRankSum=5.685;DP=478;FS=2.197;HRun=2;HaplotypeScore=76.5606;InbreedingCoeff=0.6979;MQ=57.10;MQ0=47;MQRankSum=-4.192;QD=2.62;ReadPosRankSum=0.417;VQSLOD=-0.3986;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,1:18:51.17:0,51,686	0/0:12,0:11:30.57:0,31,409	0/0:29,0:11:27.05:0,27,323	0/0:45,0:14:35.63:0,36,367	0/0:22,2:23:57.19:0,57,761	0/0:19,0:18:23.62:0,24,114	0/0:17,0:15:35.26:0,35,425	0/0:29,0:27:70.09:0,70,889	0/0:14,0:12:26.26:0,26,244	0/1:22,2:23:15.31:15,0,678	0/0:10,1:11:27.09:0,27,360	1/1:12,0:12:3.01:38,3,0	1/1:15,0:14:4.66:16,5,0	0/0:17,3:18:27.38:0,27,393	0/0:11,1:12:29.62:0,30,366	0/0:16,0:14:10.58:0,11,125	0/0:16,0:11:22.88:0,23,142	1/1:2,7:5:9.03:114,9,0	1/1:14,0:14:7.50:150,8,0	./.	./.	1/1:11,0:11:3.01:38,3,0	./.	./.	0/0:13,0:12:31.63:0,32,319	0/0:14,0:13:37.93:0,38,475	1/1:15,0:13:3.01:38,3,0	0/0:11,0:9:11.10:0,11,305
chr10	77997564	.	CCT	C	410.51	PASS	AB=1.000;AC=18;AF=0.450;AN=40;BaseQRankSum=1.240;DP=489;FS=17.343;HRun=0;HaplotypeScore=82.0158;InbreedingCoeff=0.5973;MQ=56.20;MQ0=48;MQRankSum=0.975;QD=2.47;ReadPosRankSum=1.997;VQSLOD=0.1858;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:8.63:0,9,51	0/0:12,0:11:8.96:0,9,70	./.	0/0:45,0:14:0:0,0,0	./.	1/1:19,0:19:20.59:148,21,0	1/1:17,0:15:5.83:44,6,0	./.	1/1:13,0:11:12.94:96,13,0	0/0:26,0:25:17.88:0,18,143	./.	0/1:13,0:13:0:0,0,0	1/1:17,0:17:4.77:26,5,0	0/0:21,0:19:15.84:0,16,121	0/0:12,0:12:3:0,3,25	1/1:7,9:14:2.89:16,3,0	1/1:15,0:10:17.84:123,18,0	./.	1/1:14,0:14:2.84:14,3,0	./.	./.	0/0:11,0:11:0:0,0,0	0/0:12,0:11:0:0,0,0	0/1:26,0:19:0:0,0,0	1/1:14,0:13:11.59:72,12,0	0/0:16,0:15:8.90:0,9,60	./.	0/0:11,0:9:0:0,0,0
chr10	77998516	.	A	AT	6540.64	PASS	AB=0.797;AC=33;AF=0.589;AN=56;BaseQRankSum=-12.168;DP=554;FS=6.372;HRun=10;HaplotypeScore=66.6702;InbreedingCoeff=0.7283;MQ=73.40;MQ0=2;MQRankSum=0.249;QD=18.63;ReadPosRankSum=0.798;VQSLOD=5.5923;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:38:60.11:0,60,678	1/1:0,8:8:15.04:160,15,0	0/1:14,2:14:27.47:27,0,65	0/1:12,0:11:17.81:33,0,18	1/1:5,26:31:69.58:722,70,0	1/1:2,13:15:0.25:313,0,0	0/1:6,19:25:38.42:452,0,38	1/1:8,16:25:53.79:532,54,0	1/1:2,11:13:30.08:320,30,0	1/1:6,18:24:35.64:563,36,0	1/1:7,16:24:29.82:277,30,0	0/0:16,0:16:38.95:0,39,320	0/0:17,0:17:35.89:0,36,278	1/1:4,10:14:29.99:294,30,0	1/1:4,14:18:42.11:448,42,0	1/1:2,13:16:32.24:377,32,0	1/1:4,27:31:69.17:736,69,0	1/1:24,0:24:42.63:203,43,0	0/0:23,0:23:44.89:0,45,366	0/0:21,0:21:38.91:0,39,320	0/0:18,0:18:50.94:0,51,419	0/0:14,0:14:32.94:0,33,271	0/0:16,0:16:35.90:0,36,334	0/0:20,0:20:50.92:0,51,419	1/1:3,14:17:39.10:416,39,0	1/1:4,20:26:25.58:605,26,0	0/0:18,1:20:20.97:0,21,363	1/1:2,7:9:6.02:64,6,0
chr10	77998525	.	T	TC	960.63	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=2.253;DP=544;FS=7.258;HRun=0;HaplotypeScore=90.4177;InbreedingCoeff=0.1314;MQ=65.22;MQ0=9;MQRankSum=1.062;QD=3.05;ReadPosRankSum=6.333;VQSLOD=1.6176;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:83.94:0,84,1224	0/1:9,0:9:8.45:11,0,8	0/0:15,0:8:18.87:0,19,194	0/0:11,0:8:1.49:0,1,43	1/1:28,0:28:39.29:117,39,0	0/1:16,0:16:29.01:29,0,54	0/1:25,0:25:26.99:27,0,168	0/1:25,0:23:35.27:35,0,79	0/1:13,0:13:4.81:32,0,5	0/1:23,0:23:23.37:23,0,103	0/1:21,0:21:1.13:1,0,96	0/0:13,0:13:39.13:0,39,541	0/0:15,0:15:42.56:0,43,540	0/1:14,0:14:8.65:9,0,68	1/1:16,0:16:7.70:48,8,0	0/1:18,0:18:25.20:25,0,60	1/1:28,0:28:23.61:104,24,0	1/1:4,23:27:1.92:602,2,0	0/0:23,0:23:63.06:0,63,751	0/0:21,0:21:53.99:0,54,644	0/0:19,0:19:53.74:0,54,728	0/0:13,0:13:35.95:0,36,472	0/0:18,0:18:54.01:0,54,663	0/0:18,0:18:54.16:0,54,732	0/1:18,0:18:20.63:21,0,57	0/1:27,0:27:36.72:37,0,127	0/0:26,0:26:67.58:0,68,859	1/1:7,0:7:4.07:12,4,0
chr10	78001191	.	AGC	A	9747.04	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.417;DP=643;FS=2.190;HRun=0;HaplotypeScore=79.1678;InbreedingCoeff=0.9993;MQ=86.07;MQ0=2;MQRankSum=-7.603;QD=43.13;ReadPosRankSum=3.022;VQSLOD=6.7956;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,2540	0/0:10,0:10:30.10:0,30,609	0/0:32,0:32:96.32:0,96,1861	0/0:22,0:22:63.17:0,63,1137	0/0:20,0:20:60.19:0,60,1182	0/0:21,0:21:63.22:0,63,1268	0/0:18,0:18:51.16:0,51,999	0/0:32,0:32:96.33:0,96,1942	0/0:22,0:22:66.23:0,66,1341	0/0:24,0:24:72.25:0,72,1463	0/0:17,0:17:51.17:0,51,1012	1/1:0,25:23:63.22:1028,63,0	1/1:0,25:26:69.22:1121,69,0	0/0:16,0:16:48.16:0,48,970	0/0:30,0:30:90.31:0,90,1828	0/0:21,0:21:63.22:0,63,1268	0/0:36,0:36:99:0,108,2153	1/1:0,21:21:51.17:832,51,0	1/1:0,17:17:51.16:808,51,0	1/1:0,17:18:54.18:876,54,0	1/1:0,29:29:69.24:1126,69,0	1/1:0,21:21:60.20:979,60,0	1/1:1,17:18:51.17:830,51,0	1/1:0,23:23:51.17:832,51,0	0/0:20,0:20:57.18:0,57,1112	0/0:25,0:25:75.25:0,75,1480	1/1:0,28:28:81.27:1317,81,0	0/0:7,0:7:21.07:0,21,426
chr10	78001977	.	A	AT	369.44	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.735;DP=534;FS=1.016;HRun=8;HaplotypeScore=61.7124;InbreedingCoeff=0.9403;MQ=72.84;MQ0=0;MQRankSum=0.076;QD=18.47;ReadPosRankSum=0.547;VQSLOD=3.4537;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:29:81.15:0,81,704	0/0:9,0:9:24.01:0,24,220	0/0:10,0:9:10.81:0,11,86	0/0:13,0:13:21:0,21,188	0/0:36,0:36:99:0,105,961	0/0:26,0:26:78.04:0,78,714	0/0:16,0:16:45:0,45,403	0/0:34,0:34:78.01:0,78,709	0/0:9,0:9:24:0,24,215	0/0:28,0:28:81.03:0,81,740	0/0:17,0:17:51.03:0,51,467	0/0:12,0:12:33.01:0,33,299	0/0:15,0:15:33.01:0,33,302	0/0:20,0:20:57.03:0,57,521	0/0:19,0:19:39.01:0,39,357	0/0:13,0:13:33:0,33,297	0/0:23,0:23:60.01:0,60,543	1/1:4,16:20:24.76:463,25,0	0/0:19,0:18:51.02:0,51,465	0/0:19,0:19:51.03:0,51,467	0/0:9,0:9:23.99:0,24,214	0/0:10,0:10:24:0,24,217	0/0:23,0:23:50.99:0,51,458	0/0:7,0:7:18:0,18,161	0/0:22,0:22:59.96:0,60,530	0/0:24,0:24:66.03:0,66,604	0/0:41,0:40:99:0,108,985	0/0:11,0:11:33.02:0,33,302
chr10	78003031	.	A	ACACCTTCCCATGGAAGCATCGAAGTGCTGT	105986.08	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-0.268;DP=528;FS=0.414;HRun=0;HaplotypeScore=354.8947;InbreedingCoeff=0.9828;MQ=76.46;MQ0=0;MQRankSum=-13.083;QD=247.63;ReadPosRankSum=3.640;VQSLOD=4.1195;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,7546	1/1:4,2:8:15.52:1981,16,0	0/0:19,0:19:57.20:0,57,2990	0/0:20,0:20:54.18:0,54,2796	1/1:16,4:22:45.15:4234,45,0	1/1:9,2:13:33.11:3640,33,0	1/1:19,0:19:51.09:5124,51,0	1/1:15,0:15:45.15:2717,45,0	1/1:20,1:24:54.19:6207,54,0	1/1:18,4:25:72.22:6125,72,0	1/1:10,3:17:33.11:3436,33,0	1/1:22,2:26:69.24:7041,69,0	1/1:13,4:21:45.15:5533,45,0	1/1:20,4:26:60.21:7674,60,0	1/1:20,0:22:57.18:5549,57,0	1/1:12,3:18:45.63:5696,46,0	1/1:12,4:19:39.13:4248,39,0	0/0:22,0:22:66.23:0,66,4629	1/1:11,1:15:42.14:3079,42,0	1/1:9,4:13:36.12:4067,36,0	1/1:7,0:7:15.05:1032,15,0	1/1:19,3:23:54.19:5280,54,0	1/1:20,1:22:60.12:5524,60,0	1/1:14,3:19:33.11:3152,33,0	1/1:11,0:11:30.10:2452,30,0	1/1:14,2:19:57.16:5451,57,0	1/1:15,4:20:54.19:5573,54,0	1/1:3,1:4:12.04:1168,12,0
chr10	78009465	.	C	CA	4829.58	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=21.465;DP=718;FS=2.735;HRun=1;HaplotypeScore=167.4731;InbreedingCoeff=0.9932;MQ=73.06;MQ0=0;MQRankSum=-5.020;QD=13.88;ReadPosRankSum=0.372;VQSLOD=4.3624;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,153,1967	1/1:16,0:16:45.47:264,45,0	0/0:18,0:18:51.05:0,51,614	0/0:19,0:19:54.12:0,54,645	1/1:25,0:25:39.11:237,39,0	1/1:20,0:20:50.54:261,51,0	1/1:19,0:19:41.12:259,41,0	1/1:17,4:21:50.85:262,51,0	1/1:24,0:24:66.78:367,67,0	1/1:21,0:21:57.86:313,58,0	1/1:12,0:12:16.12:87,16,0	0/0:36,0:36:99:0,108,1374	0/0:24,0:24:72.21:0,72,906	1/1:28,3:31:71.38:492,71,0	1/1:38,0:38:99:559,100,0	1/1:22,0:22:61.63:339,62,0	1/1:41,0:41:97.99:549,98,0	0/0:21,0:21:60.19:0,60,779	0/0:25,0:25:66.21:0,66,857	0/0:31,0:31:81.25:0,81,1038	0/0:38,0:38:99:0,114,1430	0/0:24,0:24:66.20:0,66,843	0/0:33,0:33:96.30:0,96,1231	0/0:25,0:25:75.24:0,75,972	1/1:20,0:20:47.83:254,48,0	1/1:34,0:34:95.94:536,96,0	0/0:23,0:23:69.20:0,69,879	1/1:4,0:4:11.17:51,11,0
chr10	78009466	.	AGC	A	10250.64	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=21.619;DP=714;FS=2.315;HRun=0;HaplotypeScore=160.7765;InbreedingCoeff=0.9946;MQ=73.23;MQ0=0;MQRankSum=-4.662;QD=29.97;ReadPosRankSum=0.805;VQSLOD=6.4408;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,160,3203	1/1:0,16:16:48.12:520,48,0	0/0:18,0:18:54.08:0,54,1000	0/0:20,0:20:56.22:0,56,1048	1/1:3,22:25:42.11:476,42,0	1/1:2,18:20:54.14:603,54,0	1/1:1,17:18:41.90:376,42,0	1/1:3,16:19:57.13:604,57,0	1/1:3,21:24:72.16:791,72,0	1/1:2,20:22:66.14:723,66,0	1/1:2,10:12:18:185,18,0	0/0:37,0:37:99:0,111,2171	0/0:24,0:24:72.25:0,72,1448	1/1:7,23:30:80.99:885,81,0	1/1:1,36:37:99:1234,105,0	1/1:1,22:23:69.15:774,69,0	1/1:1,38:39:99:1183,105,0	0/0:21,0:21:63.22:0,63,1277	0/0:24,0:24:69.24:0,69,1399	0/0:29,0:29:84.27:0,84,1669	0/0:39,0:39:99:0,117,2364	0/0:24,0:24:66.21:0,66,1305	0/0:33,0:33:96.31:0,96,1912	0/0:26,0:26:78.27:0,78,1571	1/1:0,20:20:51.14:593,51,0	1/1:1,32:33:99:1170,99,0	0/0:23,0:23:69.24:0,69,1402	1/1:0,4:4:12.03:135,12,0
chr10	78009469	.	AGT	A	10252.48	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=22.143;DP=718;FS=4.046;HRun=0;HaplotypeScore=162.5510;InbreedingCoeff=0.9946;MQ=71.43;MQ0=1;MQRankSum=-5.094;QD=29.63;ReadPosRankSum=0.662;VQSLOD=6.3216;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,163,3217	1/1:0,16:16:48.12:520,48,0	0/0:18,0:18:51.10:0,51,936	0/0:18,0:18:50.20:0,50,951	1/1:3,22:25:51.01:535,51,0	1/1:1,18:19:57.09:621,57,0	1/1:4,17:21:38.82:369,39,0	1/1:2,16:18:54.13:578,54,0	1/1:2,21:23:69.17:764,69,0	1/1:1,20:21:63.14:697,63,0	1/1:0,13:14:18:184,18,0	0/0:36,0:36:99:0,108,2143	0/0:23,0:23:69.24:0,69,1364	1/1:5,23:28:72.04:817,72,0	1/1:0,36:37:99:1210,102,0	1/1:3,22:25:75.14:822,75,0	1/1:2,38:40:99:1201,108,0	0/0:21,0:21:63.22:0,63,1280	0/0:24,0:24:72.25:0,72,1430	0/0:27,0:27:78.27:0,78,1568	0/0:41,0:41:99:0,123,2479	0/0:24,0:24:66.23:0,66,1335	0/0:33,0:33:99:0,99,1932	0/0:26,0:26:78.27:0,78,1584	1/1:2,20:22:57.09:636,57,0	1/1:0,32:33:99:1163,99,0	0/0:25,0:25:75.26:0,75,1502	1/1:0,4:4:12.03:135,12,0
chr10	78010651	.	G	GAA	14422.21	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-7.249;DP=587;FS=3.806;HRun=8;HaplotypeScore=87.2119;InbreedingCoeff=0.9957;MQ=72.41;MQ0=2;MQRankSum=-0.859;QD=34.42;ReadPosRankSum=1.179;VQSLOD=4.9424;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.16:0,60,669	1/1:2,5:7:15.05:238,15,0	0/0:24,0:18:29.72:0,30,285	0/0:19,0:17:25.27:0,25,214	1/1:5,30:35:81.24:1242,81,0	1/1:0,17:17:51.17:809,51,0	1/1:1,16:17:36.12:571,36,0	1/1:9,28:39:90.28:1367,90,0	1/1:1,21:22:57.15:877,57,0	1/1:4,23:27:66.23:1047,66,0	1/1:4,15:20:42.06:602,42,0	0/0:15,0:15:42.11:0,42,467	0/0:20,0:20:57.10:0,57,622	1/1:2,7:9:18.06:286,18,0	1/1:1,16:17:42.14:647,42,0	1/1:1,15:16:42.14:667,42,0	1/1:3,16:20:45.15:714,45,0	0/0:20,0:20:60.16:0,60,669	1/1:7,1:18:42.08:440,42,0	1/1:9,0:30:66.03:633,66,0	1/1:0,0:16:30.06:308,30,0	0/0:12,0:12:33.09:0,33,368	0/0:23,0:23:66.15:0,66,726	0/0:13,0:13:36.10:0,36,400	1/1:3,23:27:66.22:1029,66,0	1/1:5,29:35:90.26:1381,90,0	1/1:1,1:27:75.13:751,75,0	1/1:2,17:19:52.42:813,52,0
chr10	78010854	.	A	AAC	4113.34	PASS	AB=1.000;AC=26;AF=0.565;AN=46;BaseQRankSum=-2.490;DP=813;FS=6.527;HRun=0;HaplotypeScore=155.4975;InbreedingCoeff=0.7353;MQ=55.11;MQ0=47;MQRankSum=0.291;QD=11.62;ReadPosRankSum=-1.185;VQSLOD=2.8457;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:81.23:0,81,993	./.	0/0:93,0:12:12.34:0,12,126	0/0:145,0:13:8.76:0,9,152	./.	./.	0/1:19,0:19:0:0,0,0	1/1:14,2:34:48.38:462,48,0	1/1:22,0:22:5.78:57,6,0	1/1:28,0:28:40.79:376,41,0	0/1:18,0:18:0:0,0,0	0/0:31,0:31:65.20:0,65,655	0/0:29,0:29:63.10:0,63,651	1/1:16,0:18:6.02:67,6,0	./.	./.	1/1:22,0:22:15.80:136,16,0	0/1:17,0:17:39.54:81,0,40	1/1:10,12:22:36.12:564,36,0	1/1:7,21:30:14.24:193,14,0	1/1:36,0:36:75.21:1089,75,0	0/0:18,0:18:30.04:0,30,304	0/0:14,0:13:21.04:0,21,233	0/0:16,0:16:24.05:0,24,260	0/1:21,0:21:0:0,0,0	1/1:6,2:31:66.54:699,67,0	1/1:7,22:30:26.76:373,27,0	1/1:6,0:5:2.88:15,3,0
chr10	78010865	.	A	ACACACG	5704.39	PASS	AB=0.558;AC=28;AF=0.500;AN=56;BaseQRankSum=-2.571;DP=859;FS=0.449;HRun=0;HaplotypeScore=222.5004;InbreedingCoeff=0.6830;MQ=45.97;MQ0=53;MQRankSum=-6.857;QD=15.42;ReadPosRankSum=-2.232;VQSLOD=3.8888;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:38:90.14:0,90,1973	1/1:4,7:12:5.95:52,6,0	0/0:89,0:8:4.31:0,4,180	0/0:139,0:7:19.67:0,20,295	0/1:7,15:24:0:0,0,0	1/1:6,11:21:2.04:6,2,0	0/1:4,15:18:0.07:0,0,0	1/1:33,0:33:83.12:1267,83,0	1/1:9,20:29:3.74:196,4,0	1/1:8,24:32:59.55:1306,60,0	1/1:10,12:25:1.57:4,2,0	0/0:13,0:31:65.71:0,66,1312	0/0:15,0:27:63.22:0,63,1317	1/1:7,0:23:8.93:178,9,0	1/1:2,21:23:0.47:1,0,0	1/1:4,10:15:3.01:47,3,0	1/1:4,19:24:20.02:488,20,0	0/1:3,0:18:17.53:18,0,101	0/0:14,0:14:38.88:0,39,188	0/0:35,0:35:31:0,31,188	0/0:35,0:35:51.12:0,51,364	0/0:8,0:18:30.10:0,30,577	0/0:9,0:14:21.07:0,21,452	0/0:6,0:14:25.90:0,26,498	0/1:4,13:20:0.32:0,0,1	1/1:32,0:32:85.03:1988,85,0	0/0:33,0:33:26.08:0,26,220	1/1:6,5:9:8.24:152,8,0
chr10	78011231	.	CCTCT	C	1947.50	PASS	AB=0.926;AC=30;AF=0.600;AN=50;BaseQRankSum=-1.871;DP=571;FS=19.822;HRun=0;HaplotypeScore=96.2316;InbreedingCoeff=0.5136;MQ=60.14;MQ0=22;MQRankSum=0.787;QD=6.18;ReadPosRankSum=1.775;VQSLOD=0.4676;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:34:40.40:0,40,553	1/1:6,3:9:9.02:121,9,0	./.	./.	1/1:9,8:16:0.47:1,0,0	1/1:13,3:14:3.01:46,3,0	1/1:19,8:26:8.97:139,9,0	./.	1/1:18,0:21:17.94:157,18,0	1/1:17,2:19:20.36:297,20,0	1/1:12,2:14:0.21:0,0,0	0/0:22,0:24:19.47:0,19,280	0/0:21,0:37:14.58:0,15,153	1/1:17,1:19:5.97:88,6,0	1/1:13,6:14:15.02:169,15,0	1/1:12,1:12:14.71:169,15,0	1/1:15,4:19:7.14:451,7,0	0/0:14,0:15:19.29:0,19,289	0/1:19,2:21:0.68:120,0,1	1/1:16,2:19:9:95,9,0	0/0:13,0:13:5.42:0,5,23	0/0:17,0:16:3.01:0,3,52	0/0:10,0:9:9.01:0,9,128	0/0:9,0:18:0:0,0,0	1/1:4,9:11:9.02:120,9,0	0/1:27,0:26:12.04:76,0,12	0/1:22,1:22:12.34:12,0,77	0/1:11,1:12:0.13:47,0,0
chr10	78011295	.	GGA	G	823.65	PASS	AB=0.970;AC=13;AF=0.232;AN=56;BaseQRankSum=0.471;DP=626;FS=34.844;HRun=0;HaplotypeScore=109.5453;InbreedingCoeff=0.4569;MQ=59.94;MQ0=20;MQRankSum=-2.514;QD=4.50;ReadPosRankSum=-2.624;VQSLOD=0.6368;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:74.48:0,74,1060	0/0:10,0:10:17.79:0,18,175	0/1:29,0:7:9.42:9,0,10	0/0:33,0:10:8.96:0,9,115	0/0:17,0:17:32.46:0,32,333	0/0:10,0:9:21.05:0,21,225	0/0:29,0:26:47.54:0,48,498	0/0:24,0:23:41:0,41,362	0/0:29,0:28:3.25:0,3,343	0/0:19,1:18:11.90:0,12,374	0/0:21,1:22:18.41:0,18,342	0/0:21,2:22:11.96:0,12,627	0/0:32,1:32:24.41:0,24,864	0/1:19,1:20:45.37:45,0,182	0/0:30,1:27:20.74:0,21,539	0/0:26,1:25:23.58:0,24,560	0/0:32,0:32:44.63:0,45,579	0/1:17,1:17:41.66:42,0,151	1/1:6,14:19:38.89:409,39,0	1/1:3,14:16:11.74:127,12,0	1/1:8,13:20:12.04:145,12,0	0/0:12,0:12:21.07:0,21,331	0/0:15,3:18:8.92:0,9,600	0/1:19,1:19:6.08:6,0,402	0/0:14,0:12:14.79:0,15,176	0/0:24,1:24:24.92:0,25,504	1/1:8,11:14:14.86:180,15,0	0/1:17,0:16:29.99:30,0,265
chr10	78011308	.	G	GAC	470.94	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.849;DP=674;FS=4.189;HRun=0;HaplotypeScore=124.9768;InbreedingCoeff=0.6584;MQ=59.57;MQ0=20;MQRankSum=-2.205;QD=22.43;ReadPosRankSum=0.865;VQSLOD=4.2428;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:38:99:0,105,1324	0/0:8,0:8:18.06:0,18,272	0/0:30,0:7:0.10:0,0,57	0/0:45,0:12:1.37:0,1,92	0/0:20,0:20:41.86:0,42,547	0/0:10,0:10:24.06:0,24,340	0/0:26,0:26:54.13:0,54,755	0/0:29,0:28:50.73:0,51,766	0/0:25,0:24:41.20:0,41,591	0/0:24,0:22:28.22:0,28,768	0/0:22,0:21:47.93:0,48,595	0/0:23,0:22:63.08:0,63,799	0/0:31,0:31:46.82:0,47,943	0/0:20,0:20:22.28:0,22,354	0/0:29,0:27:61.06:0,61,870	0/0:29,0:27:63.44:0,63,932	0/0:31,0:32:60.08:0,60,952	1/1:5,15:20:25.99:564,26,0	0/0:23,0:20:50.31:0,50,344	0/0:21,0:19:24.18:0,24,169	0/0:22,0:22:23.86:0,24,176	0/0:12,0:12:33.02:0,33,414	0/0:20,0:20:51.04:0,51,683	0/0:24,0:23:45.04:0,45,554	0/0:17,0:15:38.99:0,39,419	0/0:26,0:26:36.05:0,36,882	0/0:24,0:21:35.64:0,36,273	0/0:19,0:18:34.23:0,34,445
chr10	78011360	.	A	AAC	12802.43	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-7.307;DP=733;FS=5.749;HRun=0;HaplotypeScore=99.3929;InbreedingCoeff=0.9963;MQ=71.28;MQ0=5;MQRankSum=1.087;QD=37.88;ReadPosRankSum=3.068;VQSLOD=6.5369;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:99:0,99,1353	1/1:0,8:8:15.04:275,15,0	0/0:45,0:29:69.90:0,70,883	0/0:44,0:33:55.55:0,56,645	1/1:0,27:28:63.21:1100,63,0	1/1:4,11:12:24.08:439,24,0	1/1:1,21:22:45.15:824,45,0	1/1:1,31:32:78.17:1239,78,0	1/1:0,26:26:54.19:989,54,0	1/1:0,17:17:51.15:877,51,0	1/1:1,14:15:17.91:330,18,0	0/0:26,0:26:29.36:0,29,958	0/0:38,0:38:99:0,108,1448	1/1:1,21:22:39.13:714,39,0	1/1:0,22:22:42.14:770,42,0	1/1:5,22:26:60.19:1068,60,0	1/1:2,34:39:75.26:1373,75,0	0/0:22,0:22:51.09:0,51,665	0/0:28,0:27:75.22:0,75,1012	0/0:20,0:20:48.15:0,48,670	0/0:41,0:41:96.31:0,96,1350	0/0:15,0:15:42.13:0,42,574	0/0:21,0:21:60.15:0,60,792	0/0:33,0:33:87.20:0,87,1181	1/1:1,27:28:57.20:1042,57,0	1/1:1,19:20:57.17:996,57,0	0/0:25,0:25:66.03:0,66,942	1/1:0,15:15:42.14:769,42,0
chr10	78012456	.	CA	C	7341.53	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=8.368;DP=589;FS=1.854;HRun=6;HaplotypeScore=70.2341;InbreedingCoeff=0.9975;MQ=68.93;MQ0=0;MQRankSum=0.279;QD=27.29;ReadPosRankSum=0.718;VQSLOD=5.3113;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.25:0,90,1162	0/0:7,0:7:21.07:0,21,276	0/0:14,0:12:24.05:0,24,283	0/0:16,0:16:19.07:0,19,302	0/0:21,0:21:57.18:0,57,730	1/1:1,27:28:78.19:838,78,0	1/1:4,13:17:27.06:290,27,0	1/1:4,26:30:78.15:811,78,0	1/1:3,22:25:66.17:709,66,0	0/0:26,0:26:72.23:0,72,947	0/0:23,0:23:60.19:0,60,785	0/0:24,0:24:60.19:0,60,787	0/0:20,0:20:57.15:0,57,706	0/0:10,0:10:24.08:0,24,316	0/0:21,0:21:54.18:0,54,709	1/1:1,13:14:36.09:387,36,0	1/1:5,28:33:84.21:903,84,0	0/0:22,0:22:63.16:0,63,788	1/1:2,27:29:81.18:860,81,0	1/1:1,21:21:54.13:580,54,0	1/1:0,18:18:54.14:580,54,0	0/0:10,0:10:30.10:0,30,393	0/0:22,0:22:60.19:0,60,788	0/0:18,0:18:51.15:0,51,655	1/1:4,26:28:72.17:773,72,0	0/0:25,0:25:72.22:0,72,925	1/1:3,20:23:57.14:610,57,0	0/0:9,0:9:27.09:0,27,350
chr10	78012700	.	TTTTTTG	T	15260.10	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=13.609;DP=544;FS=7.104;HRun=0;HaplotypeScore=124.6026;InbreedingCoeff=0.9413;MQ=57.63;MQ0=0;MQRankSum=-14.299;QD=43.23;ReadPosRankSum=0.189;VQSLOD=3.9512;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.27:0,87,2721	1/1:2,3:5:9.03:190,9,0	0/0:23,0:17:21.53:0,22,558	0/0:19,0:15:8.11:0,8,469	1/1:5,27:32:66.22:1339,66,0	1/1:5,14:19:39.13:804,39,0	1/1:3,12:15:27.09:569,27,0	1/1:10,14:24:42.10:793,42,0	1/1:0,15:15:39.13:822,39,0	1/1:5,22:27:63.18:1279,63,0	1/1:4,20:24:54.15:1085,54,0	0/0:20,0:20:54.19:0,54,1785	0/0:24,0:24:66.23:0,66,2148	1/1:1,11:12:33.11:695,33,0	1/1:2,13:15:33.11:671,33,0	1/1:3,20:23:54.19:1138,54,0	1/1:8,6:14:12.04:253,12,0	0/0:35,0:35:78.27:0,78,2547	1/1:10,8:18:24.07:468,24,0	1/1:2,22:23:63.22:1301,63,0	1/1:2,4:6:12.04:227,12,0	0/0:6,0:6:18.06:0,18,595	0/0:19,0:19:51.18:0,51,1659	0/0:12,0:12:36.12:0,36,1181	1/1:6,20:24:54.18:1097,54,0	1/1:4,18:22:51.18:1075,51,0	1/1:6,23:29:66.23:1390,66,0	1/1:2,1:3:3.01:63,3,0
chr10	78013349	.	CA	C	2742.18	PASS	AB=0.962;AC=31;AF=0.554;AN=56;BaseQRankSum=8.587;DP=629;FS=15.172;HRun=14;HaplotypeScore=125.7313;InbreedingCoeff=0.8905;MQ=73.61;MQ0=1;MQRankSum=-1.172;QD=7.58;ReadPosRankSum=9.996;VQSLOD=-0.0150;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:29:39.43:0,39,489	1/1:4,13:17:38.49:267,38,0	0/0:20,0:18:9.59:0,10,161	0/0:18,0:17:17.99:0,18,179	1/1:9,22:31:59.22:410,59,0	1/1:2,0:25:34.52:100,35,0	1/1:5,0:22:32.90:95,33,0	1/1:10,0:20:4.67:34,5,0	1/1:10,0:28:38.49:111,38,0	1/1:11,19:30:40.76:336,41,0	1/1:5,10:16:31.55:211,32,0	0/0:29,0:30:58.53:0,59,358	0/1:8,1:25:1.87:2,0,69	1/1:5,12:17:35.48:246,35,0	1/1:4,17:22:43.52:293,44,0	1/1:3,0:16:24.14:70,24,0	1/1:3,0:26:36.58:106,37,0	0/0:10,1:11:4.30:0,4,167	0/0:7,1:20:5.74:0,6,91	0/0:7,0:34:53.41:0,53,300	0/0:9,0:18:21.76:0,22,128	0/0:4,0:14:22.67:0,23,135	0/0:16,0:16:27.86:0,28,183	0/0:8,0:27:14.37:0,14,85	1/1:4,0:23:30.46:88,30,0	1/1:9,17:26:28.22:280,28,0	0/0:5,0:28:28.62:0,29,171	1/1:1,16:18:46.64:314,47,0
chr10	78013786	.	TCACACACACACACA	T	753.88	PASS	AB=0.929;AC=8;AF=0.148;AN=54;BaseQRankSum=-0.513;DP=629;FS=13.792;HRun=0;HaplotypeScore=244.5870;InbreedingCoeff=0.0470;MQ=60.65;MQ0=29;MQRankSum=-1.630;QD=5.16;ReadPosRankSum=-2.138;VQSLOD=1.0624;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:17:18.02:0,18,396	0/0:13,0:14:16.55:0,17,263	0/0:27,0:12:2.94:0,3,18	./.	0/0:14,0:14:26.41:0,26,214	0/0:23,0:23:18.38:0,18,139	0/0:18,0:16:12:0,12,110	0/0:28,0:27:26.01:0,26,158	0/0:21,0:18:16.02:0,16,111	0/0:25,0:26:35.20:0,35,588	0/1:14,0:16:13.17:13,0,94	0/1:18,8:23:13.43:175,0,13	1/1:18,0:17:6:310,6,0	0/0:16,0:16:20.98:0,21,196	0/0:24,0:25:19.66:0,20,212	0/0:27,0:25:22.19:0,22,169	0/0:18,0:16:8.77:0,9,52	0/1:18,0:17:4.03:4,0,225	0/0:13,0:13:14.34:0,14,93	0/0:23,0:23:29.39:0,29,193	0/0:39,0:37:26.52:0,27,213	0/1:23,0:22:18.21:117,0,18	0/0:14,13:25:4.04:0,4,26	0/1:21,0:20:29.07:206,0,29	0/0:20,0:21:33.78:0,34,271	0/0:32,0:30:41.13:0,41,369	0/1:22,0:23:57.52:58,0,158	0/0:10,0:9:5.99:0,6,48
chr10	78013833	.	CAT	C	2239.04	PASS	AB=0.971;AC=36;AF=0.667;AN=54;BaseQRankSum=6.000;DP=769;FS=46.183;HRun=0;HaplotypeScore=213.0347;InbreedingCoeff=0.0028;MQ=46.01;MQ0=50;MQRankSum=-1.425;QD=3.47;ReadPosRankSum=-2.595;VQSLOD=1.1934;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:33:0.71:0,1,374	0/1:13,0:11:3.79:35,0,4	./.	0/1:23,0:2:0.82:1,0,26	1/1:22,0:22:20.13:148,20,0	1/1:33,0:31:14.65:104,15,0	1/1:30,0:26:11.62:77,12,0	0/0:44,0:44:9.09:0,9,357	1/1:22,0:17:11.38:74,11,0	0/1:36,0:35:37.39:181,0,37	1/1:18,0:17:7.74:48,8,0	0/1:33,4:32:58.58:59,0,221	0/1:20,4:23:59.15:59,0,189	1/1:29,0:28:14.68:97,15,0	1/1:19,0:18:19.25:137,19,0	1/1:34,0:28:14.37:118,14,0	0/1:27,0:21:14.78:19,0,15	0/1:26,0:23:87.61:88,0,234	0/1:19,0:18:30.96:159,0,31	1/1:24,0:23:19.06:122,19,0	1/1:55,0:48:37.22:290,37,0	0/1:20,0:17:16.89:17,0,169	0/0:30,1:29:13.86:0,14,260	0/1:28,4:29:56.79:57,0,288	1/1:34,0:31:20.67:169,21,0	0/1:39,0:34:48.20:126,0,48	1/1:19,1:19:35.66:214,36,0	0/1:10,0:9:6.30:6,0,16
chr10	78013838	.	A	AG	600.69	PASS	AB=0.849;AC=5;AF=0.089;AN=56;BaseQRankSum=6.289;DP=776;FS=0.865;HRun=0;HaplotypeScore=208.1289;InbreedingCoeff=-0.1182;MQ=47.19;MQ0=52;MQRankSum=-4.288;QD=4.62;ReadPosRankSum=-0.467;VQSLOD=3.3986;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:30:66.22:0,66,922	0/0:13,0:11:11.87:0,12,163	0/0:21,0:5:9:0,9,104	0/0:33,0:4:12.04:0,12,158	0/0:25,0:25:19.45:0,19,284	0/0:32,0:30:8.25:0,8,103	0/0:32,0:28:6.72:0,7,85	0/0:42,0:41:96.76:0,97,1287	0/0:25,0:20:14.29:0,14,205	0/0:33,0:32:84.28:0,84,1161	0/0:17,0:16:9.01:0,9,94	0/0:39,0:34:54.15:0,54,703	0/0:23,0:22:60.19:0,60,820	0/0:29,0:28:14.80:0,15,184	0/0:20,0:20:17.68:0,18,239	0/0:33,0:27:7.88:0,8,123	0/1:24,1:19:36.09:36,0,82	0/0:27,0:24:63.17:0,63,843	0/1:12,1:13:39.48:39,0,376	0/1:18,10:27:99:298,0,109	0/1:44,4:41:12.34:12,0,374	0/0:20,0:17:36.45:0,36,502	0/0:34,0:32:41.89:0,42,587	0/0:32,1:30:39.32:0,39,780	0/0:31,0:29:14.95:0,15,207	0/0:39,0:34:88.46:0,88,1171	0/1:9,7:15:99:330,0,157	0/0:10,0:9:12.02:0,12,148
chr10	78013851	.	TACACAC	T	4752.69	PASS	AB=0.676;AC=28;AF=0.500;AN=56;BaseQRankSum=1.714;DP=815;FS=2.716;HRun=0;HaplotypeScore=222.6180;InbreedingCoeff=0.5872;MQ=51.05;MQ0=48;MQRankSum=-0.449;QD=10.56;ReadPosRankSum=-0.956;VQSLOD=3.6740;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:31:72.25:0,72,1957	1/1:3,13:15:5.53:129,6,0	0/1:48,0:11:1.09:1,0,303	0/0:57,0:11:24.08:0,24,489	0/0:3,17:21:0.95:0,1,9	0/0:11,19:28:2.30:0,2,12	1/1:7,28:32:1.65:5,2,0	1/1:10,31:41:90.11:1355,90,0	0/0:8,17:21:1.34:0,1,5	1/1:11,20:30:60.09:1159,60,0	1/1:4,17:20:7.88:120,8,0	0/0:42,0:39:77.43:0,77,1590	0/0:24,0:23:60.19:0,60,1300	1/1:8,21:28:8.83:120,9,0	0/0:6,14:20:2.15:0,2,8	1/1:8,24:27:0.89:3,1,0	0/1:11,17:22:0:0,0,0	0/0:27,0:24:57.11:0,57,1315	1/1:12,0:12:17.25:130,17,0	1/1:24,0:23:8.27:57,8,0	1/1:48,0:43:1.18:176,1,0	0/0:17,0:14:30:0,30,761	0/0:33,0:31:53.67:0,54,1307	0/0:32,0:30:62.97:0,63,1467	0/1:4,22:24:0.44:1,0,0	1/1:9,25:29:68.93:1304,69,0	1/1:17,0:17:4.21:81,4,0	0/1:1,6:7:59.80:113,0,60
chr10	78013856	.	A	AG	60.77	PASS	AB=0.965;AC=8;AF=0.143;AN=56;BaseQRankSum=3.283;DP=813;FS=4.867;HRun=0;HaplotypeScore=202.8451;InbreedingCoeff=0.3780;MQ=52.20;MQ0=41;MQRankSum=-2.577;QD=0.41;ReadPosRankSum=-2.728;VQSLOD=1.6083;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:33:75.08:0,75,1017	0/0:15,1:15:11.27:0,11,106	0/0:57,0:13:26.81:0,27,326	0/0:68,0:16:35.13:0,35,451	1/1:19,1:20:0.96:44,1,0	1/1:26,0:24:2.42:12,2,0	0/0:35,0:32:0.39:0,0,1	0/0:38,0:38:99:0,103,932	0/0:22,0:19:2.83:0,3,10	0/0:29,0:28:11.91:0,12,403	0/0:20,0:19:8.51:0,9,85	0/0:44,0:40:80.85:0,81,1112	0/0:24,0:23:59.99:0,60,809	0/1:28,1:28:22.77:47,0,23	0/0:19,0:19:2.60:0,3,21	0/1:31,0:27:0:1,0,0	0/0:23,0:20:0.47:0,0,1	0/0:30,0:27:62.70:0,63,847	0/0:15,0:15:39.50:0,40,252	0/0:19,1:19:17.32:0,17,140	0/0:52,0:48:36.74:0,37,270	0/0:19,0:16:35.97:0,36,502	0/0:27,0:27:54.18:0,54,751	0/0:35,0:33:68.66:0,69,955	0/1:25,0:24:0.10:0,0,0	0/0:29,0:25:62.87:0,63,388	0/1:15,2:17:64.64:65,0,185	0/0:7,0:7:8.57:0,9,72
chr10	78013860	.	AC	A	73.04	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=7.801;DP=807;FS=2.188;HRun=1;HaplotypeScore=194.7962;InbreedingCoeff=0.1713;MQ=54.11;MQ0=28;MQRankSum=-2.281;QD=0.56;ReadPosRankSum=2.784;VQSLOD=-0.6748;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:81.72:0,82,1231	1/1:14,0:13:1.70:5,2,0	0/0:64,0:16:38.39:0,38,438	0/0:71,0:17:42.06:0,42,580	0/0:21,0:21:1.55:0,2,25	1/1:24,0:23:1.82:6,2,0	0/0:34,0:33:7.36:0,7,96	0/1:37,0:37:48.86:49,0,463	0/0:22,0:20:5.53:0,6,84	0/1:24,0:25:59.86:60,0,209	0/0:18,1:19:3.15:0,3,64	0/0:43,0:39:84.28:0,84,1301	0/0:21,0:21:63.21:0,63,993	0/0:30,0:29:16.01:0,16,131	0/0:19,1:21:11.18:0,11,94	0/0:28,0:24:2.20:0,2,25	0/0:18,0:17:0.47:0,0,1	0/0:30,0:27:75.20:0,75,1107	0/0:17,0:17:23.86:0,24,176	0/0:23,0:23:15.81:0,16,128	0/0:47,2:47:18.22:0,18,181	0/0:18,0:16:35.96:0,36,564	0/0:27,0:27:63.18:0,63,943	0/0:35,0:35:77.64:0,78,1167	0/0:26,0:25:5.78:0,6,63	0/1:30,0:27:59.81:60,0,141	0/0:15,1:16:31.25:0,31,294	0/0:7,0:7:2.65:0,3,50
chr10	78013929	.	GACAC	G	4575.99	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.983;DP=1004;FS=5.739;HRun=0;HaplotypeScore=209.6741;InbreedingCoeff=0.9964;MQ=60.35;MQ0=1;MQRankSum=0.903;QD=28.25;ReadPosRankSum=3.596;VQSLOD=4.1739;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:39:90.02:0,90,1979	0/0:14,0:14:18.06:0,18,428	0/0:43,0:28:61.49:0,61,884	0/0:55,0:38:93.55:0,94,1700	0/0:26,0:27:66.10:0,66,1477	0/0:27,0:26:39.07:0,39,930	0/0:36,0:38:80.98:0,81,1780	0/0:56,0:56:99:0,132,2694	0/0:30,0:31:65.97:0,66,1455	0/0:46,0:46:99:0,132,2969	0/0:22,0:22:57.12:0,57,1262	0/0:39,0:39:93.29:0,93,2171	0/0:31,0:32:86.73:0,87,1778	0/0:33,0:33:75.24:0,75,1850	0/0:49,0:49:99:0,117,2807	0/0:53,0:54:99:0,135,3165	0/0:18,0:19:29.89:0,30,696	0/0:34,0:35:91.13:0,91,1798	1/1:5,20:25:54.02:807,54,0	1/1:4,28:32:80.81:1280,81,0	1/1:12,63:75:90.11:1500,90,0	0/0:23,0:23:69.22:0,69,1696	0/0:28,0:29:56.95:0,57,1223	0/0:68,0:68:99:0,178,4325	0/0:19,0:19:39.13:0,39,989	0/0:35,0:36:99:0,99,2162	1/1:5,25:30:56.96:989,57,0	0/0:7,0:7:21.07:0,21,401
chr10	78014918	.	GC	G	2066.95	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.209;DP=546;FS=11.470;HRun=5;HaplotypeScore=81.7857;InbreedingCoeff=0.9994;MQ=90.45;MQ0=0;MQRankSum=-1.147;QD=27.56;ReadPosRankSum=0.665;VQSLOD=3.0519;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.22:0,66,901	0/0:14,0:14:42.14:0,42,573	0/0:22,0:22:54.11:0,54,654	0/0:29,0:29:47.18:0,47,537	0/0:18,0:19:51.13:0,51,671	0/0:19,0:19:54.18:0,54,737	0/0:23,0:23:69.19:0,69,896	0/0:26,0:26:69.20:0,69,889	0/0:11,0:11:33.11:0,33,451	0/0:16,0:16:45.14:0,45,601	0/0:11,0:11:27.09:0,27,366	0/0:24,0:24:69.22:0,69,926	0/0:16,0:16:45.14:0,45,598	0/0:24,0:24:72.24:0,72,983	0/0:12,0:12:36.12:0,36,491	0/0:17,0:17:45.13:0,45,584	0/0:29,0:29:81.74:0,82,1112	0/0:32,0:32:81.26:0,81,1088	1/1:2,14:16:39.04:400,39,0	1/1:3,15:18:40:468,40,0	1/1:0,18:18:54.15:612,54,0	0/0:13,0:13:33.11:0,33,451	0/0:13,0:13:39.10:0,39,499	0/0:27,0:27:72.23:0,72,969	0/0:17,0:17:51.17:0,51,696	0/0:20,0:20:57.17:0,57,748	1/1:1,22:23:66.19:748,66,0	0/0:12,0:12:33.11:0,33,451
chr10	78016134	.	GA	G	7175.26	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=11.398;DP=665;FS=0.000;HRun=10;HaplotypeScore=72.8923;InbreedingCoeff=0.9955;MQ=80.74;MQ0=1;MQRankSum=-0.402;QD=20.10;ReadPosRankSum=1.991;VQSLOD=5.6705;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,1:40:87.99:0,88,1140	1/1:1,17:18:50.85:441,51,0	0/0:21,0:22:39.99:0,40,371	0/0:22,0:22:15.14:0,15,226	1/1:3,38:41:99:924,108,0	1/1:1,14:15:32.99:286,33,0	1/1:3,16:19:47.98:417,48,0	1/1:5,26:31:77.93:666,78,0	1/1:6,19:25:44.98:391,45,0	1/1:3,21:24:59.19:502,59,0	1/1:6,16:22:47.67:392,48,0	0/0:20,0:20:48.13:0,48,531	0/0:22,0:23:59.98:0,60,636	1/1:6,16:22:41.98:365,42,0	1/1:2,22:25:59.02:501,59,0	1/1:4,21:25:56.99:495,57,0	1/1:3,35:38:86.98:755,87,0	0/0:13,0:13:33.09:0,33,365	0/0:31,1:32:52.15:0,52,797	0/0:39,0:39:96.04:0,96,1022	0/0:16,0:16:36.02:0,36,366	0/0:15,0:15:36.10:0,36,398	0/0:16,0:16:33.09:0,33,363	0/0:28,0:28:72.04:0,72,750	1/1:2,19:21:41.98:365,42,0	1/1:4,21:25:62.97:547,63,0	0/0:20,0:20:48.13:0,48,530	1/1:0,6:6:15:130,15,0
chr10	78017165	.	G	GTTT	2511.24	PASS	AB=0.678;AC=16;AF=0.286;AN=56;BaseQRankSum=1.795;DP=576;FS=2.953;HRun=12;HaplotypeScore=116.0317;InbreedingCoeff=0.6940;MQ=72.34;MQ0=0;MQRankSum=-1.121;QD=12.75;ReadPosRankSum=-2.874;VQSLOD=1.2762;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:35:78.77:0,79,864	0/0:12,0:12:30.05:0,30,336	0/0:23,0:22:19.63:0,20,322	0/1:18,0:17:3:3,0,164	0/0:30,0:33:75.64:0,76,840	0/0:21,0:22:38.76:0,39,421	0/0:20,0:21:50.97:0,51,556	0/0:27,0:27:47.81:0,48,509	0/0:19,0:19:41.97:0,42,471	0/0:21,0:22:50.95:0,51,544	0/0:17,0:19:47.88:0,48,495	1/1:5,0:20:11.56:28,12,0	0/1:3,0:18:6.80:59,0,7	0/0:18,0:18:41.75:0,42,449	0/0:24,0:25:53.95:0,54,606	0/0:22,0:23:66.02:0,66,689	0/0:15,0:16:41.94:0,42,455	0/0:17,0:18:44.97:0,45,488	1/1:11,4:24:51.08:700,51,0	1/1:5,20:30:77.93:1045,78,0	1/1:7,2:12:11.93:118,12,0	0/1:4,0:17:16.76:46,0,17	0/1:7,0:21:5.03:5,0,43	1/1:1,0:13:13.71:31,14,0	0/0:20,0:20:57.08:0,57,623	0/0:15,0:17:40.46:0,40,461	1/1:7,15:24:39.13:664,39,0	0/0:8,0:8:18.04:0,18,202
chr10	78018733	.	C	CCTGT	14963.62	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-1.302;DP=734;FS=1.940;HRun=0;HaplotypeScore=151.4548;InbreedingCoeff=0.9411;MQ=58.04;MQ0=4;MQRankSum=-3.385;QD=26.96;ReadPosRankSum=-0.169;VQSLOD=4.7126;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:60.20:0,60,952	1/1:2,6:8:14.80:355,15,0	0/0:19,0:12:17.79:0,18,245	0/0:9,0:7:6.02:0,6,94	1/1:11,11:23:23.82:572,24,0	1/1:9,13:23:24.08:574,24,0	1/1:14,11:29:33.11:773,33,0	1/1:36,12:48:58.44:1256,58,0	1/1:8,17:25:39.13:928,39,0	1/1:18,15:39:57.62:1157,58,0	1/1:8,8:18:24.08:546,24,0	1/1:25,0:40:30.10:516,30,0	1/1:26,0:31:15.05:261,15,0	1/1:11,21:32:51.16:1220,51,0	1/1:12,17:32:35.55:860,36,0	1/1:7,14:21:36.12:862,36,0	1/1:12,26:38:60.21:1429,60,0	1/1:20,0:20:18.06:306,18,0	0/0:20,0:20:33.09:0,33,475	0/0:27,0:27:66.20:0,66,983	0/0:40,0:39:84.23:0,84,1230	1/1:18,0:20:6.02:104,6,0	1/1:15,0:15:9.03:161,9,0	1/1:18,0:31:26.71:467,27,0	1/1:8,12:22:30.10:711,30,0	1/1:11,14:27:51.17:1189,51,0	0/0:29,0:29:60.20:0,60,955	1/1:3,10:13:30.10:717,30,0
chr10	78019024	.	TGA	T	14202.76	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=19.850;DP=609;FS=23.672;HRun=0;HaplotypeScore=197.7412;InbreedingCoeff=0.9806;MQ=80.99;MQ0=0;MQRankSum=-18.199;QD=37.77;ReadPosRankSum=2.764;VQSLOD=3.0844;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,151,3048	1/1:0,9:9:24.08:347,24,0	0/0:26,0:26:78.26:0,78,1550	0/0:20,0:20:54.39:0,54,947	1/1:2,30:32:48.16:693,48,0	1/1:1,14:15:42.14:618,42,0	1/1:1,16:17:45.15:662,45,0	1/1:0,13:13:36.12:530,36,0	1/1:0,23:23:69.23:1015,69,0	1/1:1,14:15:39.13:570,39,0	1/1:0,6:6:18.06:264,18,0	1/1:1,19:20:54.18:792,54,0	1/1:0,23:23:60.20:881,60,0	1/1:0,22:22:66.22:971,66,0	1/1:0,30:30:90.30:1323,90,0	1/1:0,28:28:81.27:1191,81,0	1/1:1,21:22:60.20:882,60,0	0/0:18,0:18:54.19:0,54,1083	0/0:28,0:28:84.29:0,84,1697	0/0:22,0:22:66.23:0,66,1340	0/0:37,0:37:99:0,111,2251	1/1:3,13:16:33.11:480,33,0	1/1:0,11:11:30.10:446,30,0	1/1:0,18:18:26.66:396,27,0	1/1:0,28:28:69.23:1014,69,0	1/1:3,22:25:72.24:1040,72,0	0/0:31,0:31:93.32:0,93,1854	1/1:1,2:3:6.02:88,6,0
chr10	78020742	.	CCAT	C	11031.01	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=13.966;DP=811;FS=2.075;HRun=0;HaplotypeScore=138.0061;InbreedingCoeff=0.9980;MQ=62.83;MQ0=8;MQRankSum=3.564;QD=26.64;ReadPosRankSum=4.997;VQSLOD=5.1826;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,165,3020	1/1:1,10:11:21.02:294,21,0	0/0:38,0:25:65.97:0,66,915	0/0:33,0:25:60.71:0,61,989	1/1:1,30:31:53.71:633,54,0	1/1:4,18:22:42.13:615,42,0	1/1:3,20:23:27.09:402,27,0	1/1:11,25:35:72.02:759,72,0	1/1:1,42:43:81.28:1240,81,0	1/1:2,31:33:90.10:1140,90,0	1/1:2,12:14:17.98:246,18,0	0/0:34,0:34:74.39:0,74,1290	0/0:26,0:26:78.20:0,78,1456	1/1:0,37:37:69.23:1055,69,0	1/1:2,27:29:51.17:781,51,0	1/1:3,32:35:69.23:1057,69,0	1/1:3,27:30:42.07:631,42,0	0/0:11,0:11:33.02:0,33,598	0/0:25,0:24:60.10:0,60,904	0/0:21,0:21:59.86:0,60,905	0/0:39,0:37:99:0,105,1828	0/0:14,0:14:36.02:0,36,529	0/0:21,0:19:50.93:0,51,727	0/0:46,0:46:99:0,128,2283	1/1:2,20:22:30.10:460,30,0	1/1:3,24:26:72.11:938,72,0	0/0:28,0:28:75.22:0,75,1426	1/1:0,21:21:51.17:781,51,0
chr10	78022477	.	AGTGTGTGT	A	4772.90	PASS	AB=0.885;AC=29;AF=0.537;AN=54;BaseQRankSum=3.261;DP=777;FS=18.373;HRun=0;HaplotypeScore=216.8389;InbreedingCoeff=0.6783;MQ=55.38;MQ0=27;MQRankSum=-7.308;QD=12.37;ReadPosRankSum=-0.427;VQSLOD=2.5734;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:42:63.20:0,63,1979	1/1:5,2:7:9.03:188,9,0	./.	0/0:55,0:27:0.47:0,0,1	1/1:19,6:28:8.74:182,9,0	1/1:17,4:21:12.92:259,13,0	1/1:15,2:17:11.37:163,11,0	0/1:29,0:27:12.95:14,0,13	1/1:17,7:22:33.11:729,33,0	1/1:20,1:22:9.03:205,9,0	1/1:11,8:19:11.84:255,12,0	0/0:27,0:30:45.14:0,45,1372	0/0:36,0:38:56.37:0,56,1415	1/1:23,5:26:21.01:279,21,0	0/1:32,1:41:48.85:49,0,571	1/1:27,16:44:60.20:1346,60,0	1/1:16,1:18:5.46:90,5,0	0/1:17,4:21:99:352,0,123	0/0:13,0:11:21.04:0,21,348	0/0:17,0:19:20.87:0,21,321	0/0:31,0:33:42.11:0,42,799	0/0:24,0:27:40.18:0,40,956	0/0:25,0:29:35.15:0,35,1033	0/0:37,0:41:54.18:0,54,1663	1/1:22,7:29:9.32:166,9,0	1/1:19,3:22:23.81:383,24,0	0/0:12,0:11:21.05:0,21,409	1/1:10,1:10:6.02:115,6,0
chr10	78022535	.	T	TA	17556.62	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-5.758;DP=667;FS=2.888;HRun=1;HaplotypeScore=121.8550;InbreedingCoeff=0.9993;MQ=78.85;MQ0=1;MQRankSum=-5.749;QD=38.67;ReadPosRankSum=3.083;VQSLOD=4.6279;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1445	1/1:1,11:12:36.09:515,36,0	0/0:38,0:26:63.90:0,64,819	0/0:37,0:33:84.07:0,84,1002	1/1:2,16:18:42.14:615,42,0	1/1:1,25:27:69.23:1025,69,0	1/1:1,22:23:66.22:987,66,0	1/1:2,25:27:75.24:1104,75,0	1/1:0,22:22:63.21:942,63,0	1/1:0,17:17:51.15:725,51,0	1/1:1,18:19:48.08:668,48,0	1/1:0,18:18:48.16:716,48,0	1/1:2,20:22:51.16:763,51,0	1/1:0,24:24:63.21:942,63,0	1/1:0,31:31:90.26:1322,90,0	1/1:6,30:36:81.16:1140,81,0	1/1:1,23:24:54.18:808,54,0	0/0:16,0:16:48.01:0,48,585	0/0:19,0:19:57.19:0,57,738	0/0:16,0:16:45.15:0,45,582	0/0:26,0:26:66.20:0,66,843	1/1:3,17:20:51.17:758,51,0	1/1:1,15:16:45.14:655,45,0	1/1:1,35:36:90.21:1289,90,0	1/1:1,27:28:75.73:1123,76,0	1/1:1,25:26:78.25:1146,78,0	0/0:17,0:17:48.13:0,48,607	1/1:1,7:8:21.07:314,21,0
chr10	78023347	.	G	GA	18151.03	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=16.410;DP=640;FS=0.644;HRun=1;HaplotypeScore=111.9231;InbreedingCoeff=0.9998;MQ=86.94;MQ0=0;MQRankSum=-4.977;QD=41.92;ReadPosRankSum=2.220;VQSLOD=4.5800;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.25:0,87,1099	1/1:0,14:14:42.14:629,42,0	0/0:28,0:29:73.13:0,73,873	0/0:14,0:14:36.11:0,36,460	1/1:2,19:21:54.18:809,54,0	1/1:0,21:21:60.20:899,60,0	1/1:1,21:22:66.22:982,66,0	1/1:2,32:34:96.31:1413,96,0	1/1:2,17:19:57.16:830,57,0	1/1:0,21:21:63.21:943,63,0	1/1:3,11:14:33.11:494,33,0	1/1:1,18:19:54.18:803,54,0	1/1:0,24:24:69.23:1034,69,0	1/1:1,27:28:75.25:1124,75,0	1/1:3,26:28:78.22:1139,78,0	1/1:1,24:25:66.22:989,66,0	1/1:0,28:28:81.27:1214,81,0	0/0:13,0:13:39.13:0,39,505	0/0:21,0:21:63.20:0,63,805	0/0:22,0:22:63.20:0,63,818	0/0:52,0:52:99:0,157,2023	1/1:0,16:16:48.16:719,48,0	1/1:1,15:16:48.08:669,48,0	1/1:1,29:30:78.26:1169,78,0	1/1:0,18:18:51.17:764,51,0	1/1:0,24:24:72.24:1078,72,0	0/0:27,0:27:75.24:0,75,971	1/1:0,10:10:30.10:449,30,0
chr10	78023880	.	AT	A	11158.66	PASS	AB=0.563;AC=39;AF=0.696;AN=56;BaseQRankSum=10.799;DP=644;FS=0.000;HRun=9;HaplotypeScore=64.9597;InbreedingCoeff=0.9174;MQ=75.23;MQ0=0;MQRankSum=-2.659;QD=23.15;ReadPosRankSum=3.359;VQSLOD=5.6132;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.21:0,72,831	1/1:1,13:14:33.01:301,33,0	0/0:19,0:18:47.43:0,47,496	0/0:12,0:12:19.07:0,19,218	1/1:5,38:43:99:1043,114,0	1/1:4,17:21:50.98:459,51,0	1/1:2,18:20:42.24:455,42,0	1/1:7,29:36:87.03:796,87,0	1/1:2,13:15:39.02:357,39,0	1/1:5,33:38:99:906,99,0	1/1:1,33:34:95.96:868,96,0	1/1:3,15:18:32.97:294,33,0	1/1:2,17:19:48.02:439,48,0	1/1:1,14:15:39.02:357,39,0	1/1:1,19:20:57.03:522,57,0	1/1:3,22:25:51.02:467,51,0	1/1:0,22:22:66.02:599,66,0	0/0:19,0:19:48.10:0,48,538	0/0:16,0:17:41.96:0,42,464	0/0:28,0:28:78.22:0,78,892	0/0:8,0:8:24.07:0,24,277	1/1:2,13:15:36.02:329,36,0	1/1:1,26:27:72.04:659,72,0	0/1:2,7:9:13.61:144,0,14	1/1:0,32:32:93.05:851,93,0	1/1:3,29:32:81.02:737,81,0	0/0:33,1:34:68.80:0,69,1027	1/1:4,23:27:63.03:577,63,0
chr10	78025316	.	C	CGT	7482.10	PASS	AB=0.823;AC=34;AF=0.630;AN=54;BaseQRankSum=-3.184;DP=784;FS=5.361;HRun=0;HaplotypeScore=175.6216;InbreedingCoeff=0.1164;MQ=58.35;MQ0=5;MQRankSum=-0.810;QD=12.09;ReadPosRankSum=-0.676;VQSLOD=4.2679;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:54:77.74:0,78,778	0/1:7,3:10:21.54:125,0,22	./.	0/1:37,0:19:0:0,0,0	1/1:17,9:28:22.06:463,22,0	0/1:19,9:26:11.22:395,0,11	0/0:20,0:29:18.62:0,19,163	1/1:23,1:22:14.01:133,14,0	0/1:21,5:26:28.21:411,0,28	1/1:25,6:32:14.42:566,14,0	1/1:11,5:17:6.77:254,7,0	1/1:18,0:36:21.80:190,22,0	1/1:24,1:31:38.13:308,38,0	0/1:17,6:23:6.44:322,0,6	0/1:23,14:37:17.90:591,0,18	0/1:13,12:26:47.08:584,0,47	0/1:21,10:29:57.27:459,0,57	0/1:22,11:32:1.80:667,0,2	0/1:14,0:17:4.38:4,0,30	0/0:11,0:25:14.27:0,14,72	1/1:24,0:25:0.29:1,0,0	1/1:15,9:24:45.10:592,45,0	1/1:25,0:29:18.31:110,18,0	1/1:30,0:33:4.78:89,5,0	1/1:10,13:23:42.14:638,42,0	0/1:28,3:32:22.21:479,0,22	0/0:12,0:21:14.20:0,14,70	0/1:9,1:10:18.65:98,0,19
chr10	78025386	.	TTG	T	3052.83	PASS	AB=0.971;AC=11;AF=0.196;AN=56;BaseQRankSum=-6.317;DP=737;FS=12.087;HRun=0;HaplotypeScore=187.9324;InbreedingCoeff=0.8666;MQ=59.72;MQ0=9;MQRankSum=-0.196;QD=18.84;ReadPosRankSum=3.553;VQSLOD=3.2869;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:87.04:0,87,1878	0/0:2,0:8:14.87:0,15,121	0/0:57,0:32:19.37:0,19,485	0/0:38,0:25:23.94:0,24,352	0/0:9,0:21:30.30:0,30,257	0/0:9,0:19:23.48:0,23,191	0/0:13,0:32:35.99:0,36,331	0/0:19,0:35:58.34:0,58,499	0/0:6,0:16:21:0,21,184	0/0:13,0:32:67.33:0,67,628	0/0:6,0:18:31.07:0,31,250	0/0:14,0:20:39.01:0,39,392	0/0:4,0:13:27.01:0,27,256	0/0:5,0:17:29.98:0,30,262	0/0:7,0:32:67.15:0,67,593	0/0:10,0:29:33:0,33,291	0/1:17,1:31:18.49:18,0,90	1/1:6,13:19:19.13:420,19,0	1/1:3,15:18:42.08:482,42,0	1/1:8,20:29:57.01:674,57,0	1/1:6,26:35:71.80:801,72,0	0/0:8,0:27:58.96:0,59,508	0/0:6,0:24:59.98:0,60,545	0/0:7,0:33:66.04:0,66,681	0/0:7,0:13:11.22:0,11,87	0/0:9,1:25:59.32:0,59,534	1/1:2,25:27:69.21:835,69,0	0/0:1,0:5:12:0,12,106
chr10	78025737	.	C	CT	18331.41	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=14.030;DP=668;FS=0.326;HRun=2;HaplotypeScore=101.6013;InbreedingCoeff=0.9988;MQ=85.79;MQ0=0;MQRankSum=-4.206;QD=38.11;ReadPosRankSum=3.613;VQSLOD=4.8303;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1199	1/1:0,9:9:24.08:345,24,0	0/0:21,0:21:57.02:0,57,663	0/0:22,0:22:57.07:0,57,626	1/1:0,19:19:57.15:796,57,0	1/1:0,22:22:57.19:820,57,0	1/1:1,29:30:81.27:1166,81,0	1/1:1,39:40:99:1597,117,0	1/1:1,32:33:87.29:1252,87,0	1/1:1,29:30:87.28:1234,87,0	1/1:0,22:22:66.09:879,66,0	1/1:5,25:30:75.25:1076,75,0	1/1:1,28:29:78.26:1113,78,0	1/1:0,22:22:60.20:864,60,0	1/1:1,29:30:84.28:1209,84,0	1/1:2,25:27:66.22:950,66,0	1/1:1,15:16:30.10:432,30,0	0/0:18,0:18:51.16:0,51,632	0/0:23,0:23:66.21:0,66,818	0/0:30,0:30:69.20:0,69,842	0/0:10,0:10:30.09:0,30,372	1/1:1,24:25:56.84:820,57,0	1/1:1,27:27:72.24:1035,72,0	1/1:2,19:21:54.18:775,54,0	1/1:1,18:19:51.17:733,51,0	1/1:0,22:22:66.21:932,66,0	0/0:29,0:29:84.25:0,84,1027	1/1:0,7:7:21.07:302,21,0
chr10	78026583	.	ATG	A	6776	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=9.488;DP=938;FS=6.350;HRun=0;HaplotypeScore=167.8550;InbreedingCoeff=0.9811;MQ=61.00;MQ0=9;MQRankSum=0.444;QD=28.23;ReadPosRankSum=5.541;VQSLOD=6.0841;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:93.30:0,93,1499	1/1:5,9:13:21.07:267,21,0	0/0:51,0:41:68.77:0,69,953	0/0:39,0:33:38.84:0,39,743	1/1:3,29:32:69.22:878,69,0	0/0:27,0:27:63.22:0,63,1050	0/0:42,0:42:99:0,102,1617	0/0:41,0:41:99:0,100,1595	0/0:40,0:40:99:0,105,1710	1/1:6,32:38:96.28:1203,96,0	1/1:7,24:30:60.19:764,60,0	0/0:34,0:34:81.26:0,81,1318	0/0:28,0:28:75.26:0,75,1242	1/1:4,32:36:78.25:992,78,0	1/1:1,35:36:78.25:993,78,0	0/0:42,0:42:99:0,111,1852	0/0:31,0:31:78.27:0,78,1282	0/0:21,0:21:57.19:0,57,940	0/0:24,1:21:5.78:0,6,569	0/0:37,0:37:81.28:0,81,1336	0/0:55,0:54:99:0,127,2132	0/0:37,0:37:87.30:0,87,1452	0/0:32,1:33:49.09:0,49,1335	0/0:19,0:19:48.16:0,48,788	0/0:35,0:35:84.15:0,84,1352	1/1:6,29:35:89.45:1069,89,0	0/0:21,0:21:42.12:0,42,675	1/1:0,18:18:48.15:611,48,0
chr10	78026601	.	ATG	A	3130.27	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-10.643;DP=878;FS=10.285;HRun=0;HaplotypeScore=180.8533;InbreedingCoeff=0.9961;MQ=57.17;MQ0=10;MQRankSum=1.130;QD=23.71;ReadPosRankSum=-1.384;VQSLOD=3.6525;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:84.18:0,84,1345	0/0:11,0:10:27.05:0,27,270	0/0:43,0:26:48.16:0,48,784	0/0:35,0:28:63.14:0,63,984	0/0:28,0:28:24.34:0,24,577	0/0:29,0:29:78.16:0,78,796	0/0:39,0:39:83.51:0,84,836	0/0:36,0:36:54.28:0,54,666	0/0:35,0:35:90.19:0,90,917	0/0:35,0:35:77.39:0,77,718	0/0:31,0:30:56.41:0,56,560	0/0:29,0:29:81.12:0,81,793	0/0:28,0:28:69.59:0,70,708	0/0:34,0:34:63.11:0,63,634	0/0:38,0:38:80.18:0,80,791	0/0:42,0:42:88.46:0,88,1066	0/0:27,0:27:51.55:0,52,517	0/0:23,0:23:57.16:0,57,899	1/1:14,10:18:27.05:324,27,0	1/1:4,29:33:78.24:981,78,0	1/1:11,45:56:99:1490,117,0	0/0:36,0:36:81.08:0,81,801	0/0:28,0:28:66.11:0,66,666	0/0:24,0:24:63.14:0,63,644	0/0:26,0:26:69.08:0,69,674	0/0:32,0:32:33:0,33,696	1/1:3,16:19:39.12:496,39,0	0/0:20,0:20:17.32:0,17,390
chr10	78027643	.	A	AT	1413.05	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.090;DP=696;FS=1.341;HRun=9;HaplotypeScore=77.4403;InbreedingCoeff=0.9695;MQ=77.42;MQ0=0;MQRankSum=-2.522;QD=13.08;ReadPosRankSum=2.300;VQSLOD=3.6210;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,2:41:99:0,105,911	0/0:13,2:15:5.80:0,6,276	0/0:22,0:22:30.63:0,31,335	0/0:22,0:22:36.39:0,36,437	0/0:28,0:27:29.84:0,30,484	0/0:36,0:36:97.25:0,97,856	0/0:22,0:22:62.99:0,63,547	0/0:43,0:43:99:0,102,885	0/0:17,0:17:41.97:0,42,365	0/0:28,0:28:71.98:0,72,625	0/0:33,0:33:80.96:0,81,700	1/1:27,0:27:64.82:401,65,0	1/1:18,0:18:18.56:243,19,0	0/0:24,0:24:62.98:0,63,547	0/0:24,0:24:71.99:0,72,625	0/0:28,0:28:80.98:0,81,703	0/0:32,0:32:86.95:0,87,750	0/0:25,0:25:62.97:0,63,546	0/0:15,0:15:41.99:0,42,364	0/0:25,0:25:65.98:0,66,572	0/0:21,0:21:56.99:0,57,495	1/1:14,0:14:35.31:217,35,0	1/1:23,0:23:50.18:317,50,0	1/1:26,0:26:64.94:410,65,0	0/0:25,0:26:71:0,71,602	0/0:32,0:32:86.64:0,87,741	0/0:24,0:24:71.99:0,72,625	0/0:5,0:5:15:0,15,130
chr10	78027652	.	T	TA	3778.31	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.288;DP=721;FS=0.398;HRun=0;HaplotypeScore=75.8373;InbreedingCoeff=0.9962;MQ=81.34;MQ0=0;MQRankSum=-0.511;QD=32.57;ReadPosRankSum=3.506;VQSLOD=3.2327;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1565	0/0:14,0:14:34.94:0,35,499	0/0:24,0:24:49.23:0,49,657	0/0:28,0:28:59.14:0,59,832	0/0:22,0:21:56.10:0,56,802	0/0:38,0:38:99:0,111,1459	0/0:22,0:22:66.21:0,66,902	0/0:39,0:39:99:0,114,1496	0/0:19,0:19:51.13:0,51,657	0/0:29,0:29:84.24:0,84,1107	0/0:30,0:30:86.87:0,87,1159	1/1:0,29:29:66.22:943,66,0	1/1:1,22:23:36.78:591,37,0	0/0:26,0:26:75.20:0,75,976	0/0:27,0:27:81.24:0,81,1080	0/0:29,0:29:87.27:0,87,1167	0/0:31,0:31:93.25:0,93,1233	0/0:24,0:24:69.15:0,69,906	0/0:16,0:16:48.14:0,48,637	0/0:27,0:27:78.21:0,78,1013	0/0:24,0:24:63.18:0,63,839	1/1:0,15:15:44.91:556,45,0	1/1:0,21:21:53.99:745,54,0	1/1:1,27:28:66.22:943,66,0	0/0:25,0:25:75.13:0,75,1001	0/0:32,0:32:96.27:0,96,1273	0/0:32,0:32:96.23:0,96,1202	0/0:5,0:5:15.05:0,15,204
chr10	78028937	.	GTA	G	288.06	PASS	AB=0.969;AC=10;AF=0.185;AN=54;BaseQRankSum=3.196;DP=438;FS=2.421;HRun=0;HaplotypeScore=158.1171;InbreedingCoeff=0.2261;MQ=45.41;MQ0=9;MQRankSum=-4.809;QD=2.72;ReadPosRankSum=-1.458;VQSLOD=2.0873;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:28.65:0,29,601	0/0:11,0:11:2.90:0,3,16	0/0:11,0:6:7.83:0,8,81	./.	0/0:15,0:15:2.91:0,3,25	0/0:23,0:22:8.95:0,9,75	0/0:9,0:9:14.93:0,15,118	0/0:38,0:33:79.43:0,79,709	0/0:11,0:11:10.23:0,10,86	0/0:14,0:14:20.51:0,21,230	0/0:13,0:13:6.02:0,6,91	0/0:19,0:19:47.83:0,48,615	0/0:14,0:14:36.03:0,36,522	0/0:12,0:12:2.94:0,3,18	1/1:12,0:12:2.90:16,3,0	0/0:9,0:9:2.99:0,3,24	0/0:9,0:8:10.42:0,10,62	0/1:15,1:16:47.42:47,0,50	1/1:18,2:18:1.64:197,2,0	0/1:17,0:16:12.09:12,0,49	1/1:15,1:15:5.47:49,5,0	0/0:18,0:17:35.72:0,36,496	0/0:15,0:15:30.06:0,30,458	0/0:18,0:18:50.99:0,51,730	0/0:19,0:19:11.85:0,12,92	0/0:21,0:21:11.06:0,11,254	0/1:13,1:14:20.13:91,0,20	0/1:11,0:11:2.98:3,0,36
chr10	78028939	.	ATGTGTGTG	A	1309.27	PASS	AB=0.788;AC=21;AF=0.404;AN=52;BaseQRankSum=1.396;DP=444;FS=12.777;HRun=0;HaplotypeScore=183.6517;InbreedingCoeff=0.4619;MQ=45.48;MQ0=11;MQRankSum=-1.464;QD=6.48;ReadPosRankSum=-1.568;VQSLOD=1.7465;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:25:46:0,46,984	1/1:5,5:10:2.94:56,3,0	./.	./.	1/1:12,2:15:2.63:48,3,0	0/0:19,1:22:2.63:0,3,35	0/1:8,1:10:5.25:5,0,14	0/1:39,0:35:26.98:27,0,164	0/1:7,0:11:11.03:11,0,23	1/1:14,2:15:28.57:419,29,0	0/1:9,3:13:21.90:22,0,30	0/0:18,0:19:39.04:0,39,749	0/0:13,0:14:15.93:0,16,710	1/1:8,3:14:5.80:79,6,0	1/1:8,3:13:6.02:123,6,0	1/1:4,1:9:0.64:1,1,0	0/0:7,0:7:0.47:0,0,1	0/0:9,0:16:24.41:0,24,217	0/0:19,0:16:25.59:0,26,341	0/0:17,0:16:15.05:0,15,515	0/0:16,0:15:9.47:0,9,148	0/0:16,0:17:29.92:0,30,706	0/0:15,0:15:21.07:0,21,586	0/0:22,0:22:39.13:0,39,1207	1/1:14,2:19:5.48:28,5,0	1/1:16,4:21:23.99:474,24,0	0/0:13,0:13:20.35:0,20,345	0/1:4,5:11:0.16:181,0,0
chr10	78028994	.	TGA	T	8470.46	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=0.292;DP=565;FS=1.055;HRun=0;HaplotypeScore=123.1094;InbreedingCoeff=0.8959;MQ=67.19;MQ0=40;MQRankSum=-2.478;QD=21.89;ReadPosRankSum=5.861;VQSLOD=5.3069;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:89.84:0,90,1395	1/1:1,12:13:11.84:152,12,0	0/0:71,0:31:71.30:0,71,1117	0/0:73,0:33:53.24:0,53,936	1/1:0,15:14:21.07:308,21,0	1/1:0,20:19:21.05:308,21,0	1/1:1,25:26:42.14:616,42,0	1/1:0,23:23:68.96:841,69,0	1/1:0,12:11:24.08:352,24,0	1/1:2,11:12:33.10:455,33,0	1/1:0,10:9:6.02:88,6,0	1/1:5,3:8:21.05:287,21,0	1/1:1,9:9:15.05:220,15,0	1/1:1,8:9:15.05:220,15,0	1/1:0,16:16:15.05:220,15,0	1/1:1,15:16:24.05:352,24,0	1/1:1,12:11:12.04:170,12,0	1/1:3,22:22:30.10:440,30,0	1/1:4,13:14:42.02:513,42,0	1/1:0,17:14:21.07:307,21,0	1/1:2,20:19:23.60:351,24,0	1/1:0,10:10:18.06:264,18,0	1/1:3,8:11:12.04:176,12,0	1/1:0,27:23:42.07:590,42,0	1/1:2,14:15:18.04:264,18,0	1/1:8,8:14:42.09:544,42,0	1/1:2,13:13:15.05:220,15,0	1/1:2,5:7:15.05:213,15,0
chr10	78029615	.	TG	T	11976.46	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=13.124;DP=560;FS=2.532;HRun=1;HaplotypeScore=53.5019;InbreedingCoeff=0.9846;MQ=96.83;MQ0=0;MQRankSum=-2.723;QD=39.01;ReadPosRankSum=2.662;VQSLOD=5.4697;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.27:0,78,1245	1/1:0,14:14:39.13:545,39,0	0/0:24,0:24:71.81:0,72,1058	0/0:29,0:29:81.26:0,81,1237	1/1:0,14:14:39.13:545,39,0	1/1:0,13:13:39.13:545,39,0	1/1:0,24:24:57.19:796,57,0	1/1:0,34:34:99:1392,102,0	1/1:0,19:19:54.18:755,54,0	1/1:0,30:30:90.21:1166,90,0	1/1:0,17:17:51.17:707,51,0	0/0:16,0:16:48.16:0,48,749	0/0:21,0:21:60.19:0,60,932	1/1:0,18:18:48.16:669,48,0	1/1:0,21:21:63.21:880,63,0	1/1:0,15:15:39.13:545,39,0	1/1:1,24:25:27.32:958,27,0	0/0:29,0:29:87.27:0,87,1351	0/0:7,0:7:21.05:0,21,311	0/0:19,0:19:57.19:0,57,906	0/0:8,0:8:24.07:0,24,361	0/0:13,0:13:39.13:0,39,623	0/0:14,0:14:42.13:0,42,647	0/0:12,0:12:36.12:0,36,573	1/1:0,33:33:87.29:1216,87,0	1/1:0,28:28:84.28:1174,84,0	0/0:34,0:34:99:0,102,1576	1/1:0,2:2:6.02:84,6,0
chr10	78030407	.	G	GCTCTCT	2940.84	PASS	AB=0.918;AC=36;AF=0.750;AN=48;BaseQRankSum=2.136;DP=686;FS=22.240;HRun=0;HaplotypeScore=150.5671;InbreedingCoeff=0.4095;MQ=68.43;MQ0=18;MQRankSum=-3.616;QD=6.08;ReadPosRankSum=-3.791;VQSLOD=0.1384;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:36.87:0,37,773	1/1:10,0:11:6.02:130,6,0	1/1:36,0:24:0.47:1,0,0	./.	./.	0/1:21,0:21:0:0,0,0	1/1:24,0:24:12.03:169,12,0	1/1:39,0:38:4.96:14,5,0	0/0:15,0:15:2.48:0,2,59	1/1:25,0:24:27.09:618,27,0	0/0:15,0:15:0:0,0,0	0/1:15,7:25:39.81:71,0,40	0/1:21,1:22:5.95:91,0,6	1/1:22,0:23:8.67:86,9,0	./.	1/1:33,2:33:15.73:100,16,0	1/1:13,1:13:15.03:264,15,0	1/1:12,0:12:12.01:185,12,0	1/1:13,0:16:15.05:293,15,0	1/1:23,0:23:4.78:77,5,0	0/1:22,0:22:0:0,0,0	1/1:20,0:23:2.97:21,3,0	1/1:19,0:18:5.74:38,6,0	0/0:44,0:43:14.53:0,15,166	1/1:37,0:35:2.75:27,3,0	1/1:37,0:36:45.59:810,46,0	1/1:19,0:19:3.01:79,3,0	./.
chr10	78030435	.	T	TCTCTCTCTCTCT	1945.90	PASS	AB=1.000;AC=31;AF=0.620;AN=50;BaseQRankSum=-1.455;DP=626;FS=30.146;HRun=0;HaplotypeScore=170.8166;InbreedingCoeff=0.2609;MQ=45.62;MQ0=23;MQRankSum=-5.214;QD=4.64;ReadPosRankSum=-4.352;VQSLOD=-0.2340;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:41:35.59:0,36,1320	1/1:5,0:5:5.05:51,5,0	./.	0/1:19,0:2:0:0,0,0	./.	1/1:17,0:17:0.47:1,0,0	1/1:22,0:22:11.52:168,12,0	1/1:31,0:30:13.73:76,14,0	0/0:20,0:20:2.83:0,3,101	1/1:25,0:23:14.66:354,15,0	0/0:20,0:20:0.89:0,1,2	0/1:27,0:27:43.21:43,0,85	0/1:25,0:24:6.30:6,0,85	0/1:30,0:30:27.33:87,0,27	0/1:26,0:24:0:0,0,0	0/1:36,0:34:8.14:128,0,8	1/1:14,0:13:3.69:63,4,0	1/1:12,0:12:15.02:271,15,0	1/1:15,0:13:14.24:171,14,0	1/1:21,0:22:3.83:75,4,0	1/1:15,4:18:1.95:6,2,0	1/1:27,0:27:2.97:21,3,0	0/0:23,0:22:5.82:0,6,62	0/0:40,0:38:14.82:0,15,303	0/0:28,0:26:3.47:0,3,29	0/1:30,0:28:33.56:482,0,34	1/1:16,0:16:3.48:87,3,0	./.
chr10	78030446	.	C	CTG	991.76	PASS	AB=0.963;AC=23;AF=0.411;AN=56;BaseQRankSum=10.172;DP=595;FS=21.495;HRun=0;HaplotypeScore=107.5329;InbreedingCoeff=0.0309;MQ=47.10;MQ0=16;MQRankSum=1.175;QD=2.86;ReadPosRankSum=1.965;VQSLOD=0.7350;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:47:99:0,102,1006	0/0:3,0:3:0.89:0,1,14	0/0:9,0:2:0:0,0,0	0/0:21,0:7:2.78:0,3,80	1/1:14,0:13:11.97:96,12,0	1/1:18,0:18:5.75:41,6,0	0/0:21,0:21:0.01:0,0,0	0/0:24,0:24:6.41:0,6,274	0/0:16,0:16:8.68:0,9,80	0/1:23,0:21:99:161,0,124	1/1:21,0:21:20.86:164,21,0	0/1:27,0:27:46.59:140,0,47	0/1:11,13:25:0.30:39,0,0	0/1:26,0:26:24.94:25,0,49	0/1:23,0:21:35.10:55,0,35	0/1:35,0:34:18.84:23,0,19	0/1:14,0:13:9.61:28,0,10	0/0:13,0:13:9.16:0,9,194	0/1:11,0:9:15.05:15,0,43	0/0:20,0:20:4.05:0,4,28	1/1:13,0:11:2.66:24,3,0	0/1:21,1:22:33.03:118,0,33	0/0:22,0:21:0.31:0,0,0	0/0:49,0:47:8.21:0,8,92	0/1:28,0:27:0.33:0,0,41	0/1:30,0:28:99:125,0,149	1/1:14,0:14:11.47:68,11,0	1/1:2,0:2:2.99:24,3,0
chr10	78030448	.	C	CTGTGTGTG	3855.86	PASS	AB=0.960;AC=26;AF=0.464;AN=56;BaseQRankSum=1.400;DP=594;FS=22.924;HRun=0;HaplotypeScore=138.2437;InbreedingCoeff=-0.1087;MQ=48.42;MQ0=13;MQRankSum=0.115;QD=9.50;ReadPosRankSum=3.732;VQSLOD=1.1365;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:49:82.21:0,82,2129	1/1:4,0:4:1.26:75,1,0	0/0:11,0:2:2.97:0,3,20	0/1:20,0:8:4.92:5,0,212	1/1:14,0:13:12.04:313,12,0	1/1:18,0:18:5.52:75,6,0	0/0:21,0:21:12.46:0,12,103	0/1:22,0:22:99:222,0,151	0/1:16,0:16:28.34:28,0,44	0/1:14,6:22:83:573,0,83	1/1:22,0:22:23.35:656,23,0	0/1:27,0:27:65.76:154,0,66	0/1:26,0:25:17.79:18,0,130	0/0:26,0:26:2.93:0,3,25	0/1:24,0:22:10.80:203,0,11	0/1:34,0:33:51.14:51,0,86	0/1:9,4:13:56.44:56,0,101	0/0:13,0:13:36.54:0,37,792	0/1:12,0:10:40.09:152,0,40	0/0:19,0:19:6.17:0,6,50	1/1:12,0:10:8.51:130,9,0	0/1:22,0:22:57.36:72,0,57	0/0:20,0:20:6.04:0,6,88	0/1:49,0:47:2.49:2,0,145	0/0:27,0:26:8.96:0,9,97	0/1:30,0:28:99:813,0,145	0/1:14,0:14:4.17:242,0,4	1/1:2,0:2:2.88:15,3,0
chr10	78030450	.	C	CTGTGTGTGTG	7106.98	PASS	AB=0.834;AC=43;AF=0.768;AN=56;BaseQRankSum=-1.981;DP=642;FS=0.638;HRun=0;HaplotypeScore=153.4984;InbreedingCoeff=0.4342;MQ=48.51;MQ0=12;MQRankSum=-1.126;QD=13.72;ReadPosRankSum=0.520;VQSLOD=3.7396;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:48:62.84:0,63,2028	1/1:3,0:4:6.01:120,6,0	0/0:11,0:2:3.01:0,3,41	0/0:22,0:8:7.78:0,8,168	1/1:15,0:14:12.04:404,12,0	1/1:5,1:22:5.98:106,6,0	0/0:6,10:27:0.32:0,0,1	1/1:24,0:24:38.81:633,39,0	1/1:2,9:17:3.01:51,3,0	1/1:29,0:27:48.52:1178,49,0	1/1:25,0:25:26.62:864,27,0	0/1:26,0:27:27.62:280,0,28	1/1:27,0:26:8.53:90,9,0	1/1:10,15:29:5.99:149,6,0	1/1:22,1:21:12.02:311,12,0	1/1:10,19:34:3.01:120,3,0	1/1:15,0:14:8.94:142,9,0	0/0:14,0:14:30.10:0,30,749	1/1:16,0:13:24.02:453,24,0	1/1:7,1:22:2.86:20,3,0	1/1:14,0:13:3.16:165,3,0	0/1:21,0:22:12.43:127,0,12	1/1:5,0:21:0.45:1,0,0	1/1:10,0:49:6.47:104,6,0	0/1:8,16:28:0.13:0,0,0	1/1:12,17:32:51.83:1434,52,0	1/1:14,0:14:12.04:328,12,0	1/1:2,0:2:3:26,3,0
chr10	78030647	.	GA	G	14324.03	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-0.540;DP=780;FS=1.480;HRun=2;HaplotypeScore=91.0587;InbreedingCoeff=1.0000;MQ=81.57;MQ0=0;MQRankSum=-3.566;QD=35.72;ReadPosRankSum=1.873;VQSLOD=5.3022;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,1996	1/1:0,16:16:41.96:545,42,0	0/0:31,0:31:87.14:0,87,1173	0/0:26,0:26:66.62:0,67,941	1/1:0,29:29:84.23:1071,84,0	1/1:0,19:19:54.18:700,54,0	1/1:0,36:36:99:1324,102,0	1/1:2,33:35:99:1266,99,0	1/1:0,38:38:99:1362,105,0	1/1:0,30:30:90.28:1155,90,0	1/1:0,14:14:39.13:506,39,0	0/0:40,0:40:99:0,117,1622	0/0:20,0:20:60.18:0,60,822	1/1:1,27:28:78.25:1012,78,0	1/1:0,39:39:99:1363,105,0	1/1:1,23:24:57.19:739,57,0	1/1:0,19:19:51.17:662,51,0	0/0:25,0:25:75.25:0,75,1123	0/0:27,0:27:81.23:0,81,1170	0/0:20,0:20:60.10:0,60,826	0/0:26,0:26:72.24:0,72,1077	0/0:25,0:25:62.24:0,62,881	0/0:17,0:17:51.15:0,51,688	0/0:48,0:47:99:0,144,1980	1/1:1,25:26:69.22:896,69,0	1/1:0,35:35:99:1254,99,0	0/0:28,0:28:81.27:0,81,1209	1/1:0,13:13:36.12:467,36,0
chr10	78031677	.	ATCT	A	3191.57	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.498;DP=795;FS=0.445;HRun=0;HaplotypeScore=118.1383;InbreedingCoeff=0.9914;MQ=80.65;MQ0=0;MQRankSum=-2.934;QD=32.57;ReadPosRankSum=1.968;VQSLOD=3.9883;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,120,2498	0/0:11,0:11:30.10:0,30,629	0/0:26,0:26:51.15:0,51,964	0/0:23,1:24:44.94:0,45,871	0/0:28,0:28:63.20:0,63,1282	0/0:20,0:20:57.20:0,57,1194	0/0:13,0:13:12.13:0,12,608	0/0:35,0:35:81.27:0,81,1656	0/0:28,0:28:63.22:0,63,1320	0/0:43,0:43:99:0,120,2465	0/0:24,0:24:60.17:0,60,1146	0/0:38,0:38:99:0,102,2015	0/0:30,0:30:84.29:0,84,1760	0/0:21,0:21:57.20:0,57,1180	0/0:44,0:44:99:0,117,2366	0/0:40,0:40:99:0,105,2201	0/0:34,0:34:81.28:0,81,1680	0/0:17,0:17:33.11:0,33,691	1/1:6,16:22:48.11:668,48,0	1/1:3,19:22:54.18:807,54,0	1/1:2,30:32:81.27:1204,81,0	0/0:27,0:27:69.23:0,69,1396	0/0:34,0:34:99:0,99,1964	0/0:29,0:29:69.24:0,69,1442	0/0:19,0:19:48.16:0,48,968	0/0:38,0:38:99:0,108,2220	1/1:4,18:22:45.15:673,45,0	0/0:25,0:25:63.22:0,63,1320
chr10	78032142	.	ACTG	A	16043.88	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=12.474;DP=642;FS=2.919;HRun=0;HaplotypeScore=98.9284;InbreedingCoeff=0.9978;MQ=90.74;MQ0=0;MQRankSum=-6.174;QD=37.14;ReadPosRankSum=3.572;VQSLOD=5.8116;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.21:0,60,1305	1/1:1,9:10:24.08:386,24,0	0/0:25,0:25:69.20:0,69,1304	0/0:31,0:31:84.07:0,84,1670	1/1:3,20:23:33.11:530,33,0	1/1:1,19:20:51.14:783,51,0	1/1:0,25:25:63.21:1012,63,0	1/1:3,37:40:99:1660,108,0	1/1:1,21:22:57.19:916,57,0	1/1:4,20:24:60.20:944,60,0	1/1:0,10:10:18.06:280,18,0	0/0:23,0:23:69.24:0,69,1512	0/0:30,0:30:87.30:0,87,1901	1/1:2,22:24:54.18:860,54,0	1/1:0,25:25:63.21:1003,63,0	1/1:0,22:22:63.16:1012,63,0	1/1:3,24:27:54.65:859,55,0	1/1:2,22:24:57.19:908,57,0	1/1:2,16:18:45.14:701,45,0	1/1:1,14:15:33.08:522,33,0	1/1:3,33:36:80.84:1301,81,0	0/0:22,0:22:57.18:0,57,1199	0/0:16,0:16:42.14:0,42,907	0/0:40,0:40:99:0,105,2313	1/1:4,14:18:36.12:570,36,0	1/1:2,12:14:30.10:475,30,0	1/1:2,24:26:60.16:936,60,0	1/1:0,9:9:24.08:386,24,0
chr10	78032763	.	T	TCA	102.85	PASS	AB=0.853;AC=5;AF=0.089;AN=56;BaseQRankSum=6.149;DP=488;FS=1.321;HRun=0;HaplotypeScore=83.7000;InbreedingCoeff=0.1977;MQ=67.68;MQ0=13;MQRankSum=-1.414;QD=1.39;ReadPosRankSum=1.143;VQSLOD=1.2345;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:78.17:0,78,1076	0/0:6,0:6:12:0,12,149	0/0:35,0:13:39.07:0,39,529	0/0:37,0:18:44.81:0,45,628	0/0:10,0:10:30.08:0,30,440	0/0:16,0:16:32.97:0,33,462	0/0:18,0:17:39.11:0,39,584	0/0:14,0:14:42.07:0,42,614	0/0:20,0:20:51.17:0,51,796	0/0:20,0:20:57.19:0,57,908	0/0:9,0:9:27.07:0,27,384	0/0:10,0:9:24.08:0,24,380	0/0:12,0:12:36.12:0,36,576	0/0:13,0:13:39.11:0,39,571	0/0:18,0:17:44.36:0,44,672	0/0:22,0:22:63.12:0,63,926	0/0:17,0:17:40.22:0,40,503	0/0:17,0:16:48.16:0,48,714	1/1:6,0:5:2.24:5,2,0	0/1:11,1:12:10.98:44,0,11	0/1:28,0:27:27.87:106,0,28	0/0:19,0:18:39.12:0,39,576	0/0:12,0:12:33.08:0,33,480	0/0:16,0:16:45.06:0,45,628	0/0:14,0:14:38.33:0,38,559	0/0:22,0:22:62.65:0,63,928	0/1:12,11:28:34.49:52,0,34	0/0:5,0:4:12.04:0,12,188
chr10	78032764	.	TAC	T	43.96	PASS	AB=0.993;AC=16;AF=0.308;AN=52;BaseQRankSum=2.704;DP=512;FS=1.355;HRun=0;HaplotypeScore=77.2438;InbreedingCoeff=0.2754;MQ=65.45;MQ0=13;MQRankSum=0.884;QD=0.26;ReadPosRankSum=1.941;VQSLOD=1.4839;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:17.56:0,18,146	1/1:2,4:6:3:32,3,0	./.	./.	1/1:9,0:10:5.80:25,6,0	0/0:17,0:17:16.57:0,17,177	0/0:22,0:21:8.37:0,8,99	0/0:16,0:16:2.13:0,2,5	0/0:21,0:21:13.27:0,13,141	1/1:19,0:20:8.44:40,8,0	0/1:9,0:9:1.05:1,0,7	0/0:10,0:9:5.75:0,6,39	0/0:13,0:13:24.18:0,24,225	1/1:13,0:13:6.17:20,6,0	1/1:18,0:17:3.73:10,4,0	0/1:22,1:23:10.04:10,0,203	0/1:17,0:17:17.35:17,0,84	0/1:19,0:18:15.50:15,0,132	0/0:6,0:5:0.89:0,1,2	0/0:16,0:16:12.02:0,12,139	0/0:34,0:33:29.46:0,29,276	0/1:19,0:18:5.39:5,0,52	0/0:11,0:11:1.82:0,2,5	0/0:19,0:19:4.54:0,5,153	0/1:14,0:14:12.97:13,0,146	0/0:22,0:22:21.16:0,21,168	0/0:27,0:27:13.85:0,14,134	0/0:5,0:4:3.01:0,3,43
chr10	78035022	.	T	TG	1215.85	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-2.381;DP=614;FS=2.696;HRun=9;HaplotypeScore=73.0147;InbreedingCoeff=0.9294;MQ=68.56;MQ0=2;MQRankSum=0.533;QD=13.07;ReadPosRankSum=-1.215;VQSLOD=3.4247;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:48.76:0,49,579	0/0:8,0:8:24:0,24,208	0/0:18,0:18:36.61:0,37,273	0/0:17,0:15:26.97:0,27,227	0/0:31,0:32:73.99:0,74,627	0/0:19,0:19:47.95:0,48,410	0/0:23,0:23:53.95:0,54,464	0/0:17,0:17:32.95:0,33,279	0/0:20,0:20:44.91:0,45,378	0/0:15,0:15:23.98:0,24,206	0/0:36,0:36:92.97:0,93,806	1/1:3,6:9:3.68:182,4,0	1/1:11,16:27:5.17:244,5,0	0/0:27,0:27:60.45:0,60,521	0/0:26,0:26:56.94:0,57,491	0/0:15,0:15:32.99:0,33,286	0/0:30,0:31:82.95:0,83,697	0/0:29,0:30:78.84:0,79,662	0/0:20,0:19:29.92:0,30,253	0/0:39,0:38:71.95:0,72,624	0/0:23,1:24:26.80:0,27,461	1/1:6,10:16:26.92:260,27,0	1/1:8,14:22:36.09:392,36,0	1/1:5,14:19:27.07:299,27,0	0/0:22,0:23:40.61:0,41,384	0/0:16,0:16:32.99:0,33,286	0/0:22,0:22:56.97:0,57,492	0/0:8,0:8:23.99:0,24,208
chr10	78035957	.	AGGAAGCGCAAGG	A	13639	PASS	AB=0.556;AC=28;AF=0.538;AN=52;BaseQRankSum=13.797;DP=352;FS=0.445;HRun=0;HaplotypeScore=123.0630;InbreedingCoeff=0.8118;MQ=43.00;MQ0=12;MQRankSum=-11.347;QD=82.16;ReadPosRankSum=2.648;VQSLOD=4.8490;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:38:99:0,105,5540	1/1:0,4:4:12.04:475,12,0	./.	./.	1/1:0,10:10:21.07:811,21,0	1/1:1,14:13:27.09:1055,27,0	0/1:3,6:6:99:228,0,103	1/1:1,4:5:15.05:509,15,0	1/1:0,5:5:12.04:475,12,0	1/1:2,12:11:27.09:1069,27,0	1/1:0,12:10:21.07:831,21,0	0/0:12,0:12:36.12:0,36,2173	0/0:4,0:4:12.04:0,12,763	1/1:0,12:7:15.05:593,15,0	1/1:0,17:17:48.16:1900,48,0	1/1:0,13:13:36.12:1425,36,0	1/1:1,11:11:27.09:1069,27,0	0/0:15,0:15:42.14:0,42,2468	0/0:9,0:8:24.08:0,24,1100	0/0:21,0:21:60.19:0,60,3417	0/0:22,0:21:57.18:0,57,3024	0/0:17,0:17:48.16:0,48,2875	0/0:6,0:6:12.04:0,12,759	0/0:22,0:22:57.20:0,57,3034	1/1:0,14:13:27.09:1069,27,0	0/1:1,19:19:99:1774,0,140	0/0:17,0:17:51.18:0,51,3034	1/1:1,3:3:9.03:356,9,0
chr10	78038570	.	G	GGTGTGTGTGT	23655.91	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-0.355;DP=792;FS=1.166;HRun=0;HaplotypeScore=236.8742;InbreedingCoeff=0.6320;MQ=54.00;MQ0=2;MQRankSum=-7.883;QD=33.41;ReadPosRankSum=0.209;VQSLOD=4.0347;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:46:68.99:0,69,2346	1/1:8,3:14:20.99:624,21,0	0/0:36,0:24:34.97:0,35,574	0/1:34,0:18:11.23:11,0,299	1/1:10,2:27:15.04:695,15,0	1/1:6,12:21:18.06:797,18,0	1/1:14,18:36:24.08:1124,24,0	1/1:39,0:39:65.91:1327,66,0	1/1:11,23:38:42.14:2003,42,0	1/1:15,23:41:78.70:2953,79,0	1/1:7,9:16:9.03:454,9,0	1/1:11,0:30:24.08:633,24,0	1/1:15,0:25:54:1337,54,0	1/1:15,20:36:18.06:902,18,0	1/1:9,21:32:39.13:1890,39,0	1/1:9,19:33:35.79:1622,36,0	1/1:12,16:30:11.90:320,12,0	1/1:8,1:21:8.86:343,9,0	1/1:7,0:17:36.19:468,36,0	1/1:10,1:24:12.04:364,12,0	1/1:12,0:26:2.68:11,3,0	1/1:10,0:29:16.96:396,17,0	1/1:10,0:22:8.98:288,9,0	1/1:17,0:30:5.66:143,6,0	1/1:11,12:24:18.06:853,18,0	1/1:11,9:21:54.13:1884,54,0	1/1:19,0:28:71.02:1528,71,0	1/1:11,0:12:22.32:687,22,0
chr10	78039262	.	T	TAA	5224.53	PASS	AB=0.900;AC=43;AF=0.768;AN=56;BaseQRankSum=-1.084;DP=553;FS=1.087;HRun=13;HaplotypeScore=83.6606;InbreedingCoeff=0.7403;MQ=68.41;MQ0=2;MQRankSum=-2.734;QD=12.01;ReadPosRankSum=-2.871;VQSLOD=3.2521;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:17.85:0,18,319	1/1:1,8:10:21.06:273,21,0	0/0:23,0:15:9.89:0,10,141	0/0:15,0:9:7.98:0,8,53	1/1:6,17:26:54.67:485,55,0	1/1:2,17:21:26.52:298,27,0	1/1:4,5:15:25.99:251,26,0	1/1:8,16:24:38.13:317,38,0	1/1:1,2:12:8.52:90,9,0	1/1:7,19:27:52.59:567,53,0	1/1:7,13:25:50.04:420,50,0	1/1:7,0:14:26.46:150,26,0	1/1:4,1:25:35.84:185,36,0	1/1:6,16:22:16.27:165,16,0	1/1:0,13:15:21.54:287,22,0	1/1:15,4:21:40.53:416,41,0	1/1:5,17:26:14.44:239,14,0	1/1:3,0:9:14.97:52,15,0	0/1:16,1:18:27.47:27,0,141	0/0:23,0:24:28.13:0,28,280	0/0:8,0:11:20.93:0,21,185	1/1:7,0:23:0.88:94,1,0	1/1:11,0:29:10.45:37,10,0	1/1:6,0:17:22.92:88,23,0	1/1:7,15:24:27.20:298,27,0	1/1:9,14:24:37.29:363,37,0	0/0:18,0:21:0.43:0,0,315	1/1:0,8:8:9.03:122,9,0
chr10	78039477	.	AAGAGAGAGAGAAAGAGAG	A	4341.93	PASS	AB=0.993;AC=33;AF=0.589;AN=56;BaseQRankSum=-6.056;DP=615;FS=1.899;HRun=0;HaplotypeScore=270.3528;InbreedingCoeff=0.2655;MQ=64.47;MQ0=12;MQRankSum=1.012;QD=11.19;ReadPosRankSum=2.465;VQSLOD=3.6280;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:66.41:0,66,1712	1/1:6,0:6:8.73:74,9,0	0/0:41,0:21:23.67:0,24,232	0/0:61,0:32:44.61:0,45,403	1/1:5,25:29:2.07:16,2,0	0/1:15,0:14:14.64:206,0,15	1/1:25,0:25:25.97:194,26,0	1/1:29,0:29:53.95:481,54,0	1/1:4,0:16:5.95:139,6,0	1/1:5,12:16:35.95:506,36,0	1/1:11,0:11:11.25:94,11,0	0/1:15,0:15:55.88:56,0,106	0/1:13,0:13:99:144,0,255	1/1:29,1:30:45.93:525,46,0	1/1:17,0:18:5.22:379,5,0	0/1:27,0:27:6.64:356,0,7	0/1:19,0:19:92.46:255,0,92	0/1:20,0:18:4.48:149,0,4	0/0:22,0:19:35.39:0,35,604	0/0:22,0:21:54.94:0,55,1309	0/0:24,0:23:58.27:0,58,2154	0/1:16,0:16:30.87:31,0,614	0/1:17,0:17:82.85:126,0,83	0/1:33,0:31:99:224,0,336	1/1:7,0:7:11.99:102,12,0	1/1:14,0:14:7.19:231,7,0	0/0:25,0:24:45.11:0,45,1803	1/1:1,8:9:3.01:55,3,0
chr10	78039600	.	G	GGTAAGAGA	6137.44	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-6.393;DP=626;FS=9.724;HRun=0;HaplotypeScore=153.1827;InbreedingCoeff=0.9961;MQ=67.80;MQ0=2;MQRankSum=-10.262;QD=57.90;ReadPosRankSum=0.954;VQSLOD=4.4559;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:81.27:0,81,2056	0/0:9,0:9:24.08:0,24,600	0/0:22,0:19:17.15:0,17,302	0/0:29,0:26:41.38:0,41,756	0/0:22,0:22:47.56:0,48,1169	0/0:22,0:22:57.18:0,57,1393	0/0:30,0:29:72.18:0,72,1695	0/0:37,0:37:45.09:0,45,873	0/0:25,0:25:66.19:0,66,1515	0/0:22,0:22:51.17:0,51,1252	0/0:21,0:21:48.15:0,48,1172	1/1:3,15:20:36.12:1509,36,0	1/1:6,7:17:27.98:1109,28,0	0/0:26,0:26:72.23:0,72,1791	0/0:24,0:24:63.22:0,63,1571	0/0:25,0:25:63.20:0,63,1471	0/0:16,0:16:48.13:0,48,1143	0/0:16,0:16:33.04:0,33,640	0/0:21,0:21:36.02:0,36,717	0/0:19,0:19:51.16:0,51,1249	0/0:35,0:35:90.30:0,90,2249	1/1:3,16:23:38.86:1520,39,0	1/1:3,15:20:24.49:898,24,0	1/1:4,14:26:27.09:1102,27,0	0/0:18,0:18:48.16:0,48,1239	0/0:22,0:22:54.17:0,54,1322	0/0:15,0:15:42.13:0,42,1040	0/0:10,0:10:30.10:0,30,760
chr10	78042754	.	CAT	C	2030.56	PASS	AB=0.933;AC=11;AF=0.196;AN=56;BaseQRankSum=-0.261;DP=716;FS=3.141;HRun=0;HaplotypeScore=101.2826;InbreedingCoeff=0.8720;MQ=71.29;MQ0=10;MQRankSum=-1.223;QD=15.74;ReadPosRankSum=0.069;VQSLOD=3.6645;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:50.87:0,51,428	0/0:12,0:12:32.68:0,33,330	0/0:43,0:26:59.10:0,59,606	0/0:50,0:37:99:0,99,954	0/0:22,0:22:53.48:0,53,484	0/0:26,0:26:38.51:0,39,382	0/0:25,0:24:44.97:0,45,457	0/0:22,0:22:55.47:0,55,450	0/0:22,0:21:19.33:0,19,397	0/0:38,0:38:99:0,109,1078	0/0:21,0:21:19.21:0,19,449	1/1:20,2:22:17.82:396,18,0	1/1:19,0:19:27.14:318,27,0	0/0:29,0:28:36.21:0,36,413	0/0:36,0:36:72.89:0,73,741	0/0:39,0:39:59.95:0,60,631	0/0:20,0:20:44.98:0,45,449	1/1:13,0:13:16.74:223,17,0	0/0:15,0:14:36.24:0,36,300	0/0:24,0:24:49.79:0,50,444	0/0:38,0:38:43.96:0,44,746	1/1:26,1:27:38.28:521,38,0	1/1:20,0:20:17.85:327,18,0	0/1:26,2:28:26.14:424,0,26	0/0:20,0:20:47.95:0,48,481	0/0:20,0:20:12.33:0,12,565	0/0:19,0:19:32.96:0,33,308	0/0:17,0:16:38.95:0,39,375
chr10	78042792	.	C	CAA	5680.50	PASS	AB=0.574;AC=29;AF=0.518;AN=56;BaseQRankSum=-5.515;DP=740;FS=44.500;HRun=1;HaplotypeScore=96.3181;InbreedingCoeff=0.3162;MQ=57.53;MQ0=15;MQRankSum=3.097;QD=10.52;ReadPosRankSum=-0.358;VQSLOD=-0.5684;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:56.55:0,57,516	1/1:4,16:20:28.17:401,28,0	0/0:13,0:2:3.45:0,3,23	0/0:15,0:5:11.67:0,12,99	1/1:4,16:21:8.43:256,8,0	1/1:3,24:28:3.08:269,3,0	1/1:3,25:27:1.07:271,1,0	1/1:30,0:28:14.19:373,14,0	1/1:5,24:28:25.40:351,25,0	0/1:9,29:39:28.85:627,0,29	1/1:5,14:19:26.86:286,27,0	0/0:28,0:27:59.68:0,60,513	0/0:19,0:19:38.30:0,38,313	1/1:3,29:30:12.12:231,12,0	0/1:7,22:30:2.36:211,0,2	0/1:5,36:40:3.27:319,0,3	0/1:8,16:24:36.18:202,0,36	0/0:9,0:8:23.72:0,24,167	1/1:23,0:22:29.13:419,29,0	0/1:5,15:23:30.47:284,0,30	0/1:22,36:65:98.01:256,0,98	0/0:23,0:22:29.64:0,30,254	0/0:20,0:20:34.78:0,35,293	0/0:36,0:36:75.72:0,76,717	0/1:6,16:23:62.77:154,0,63	1/1:31,0:31:29.72:622,30,0	0/1:5,0:23:29.04:98,0,29	0/1:3,5:8:8.23:50,0,8
chr10	78043583	.	A	AATG	38823.57	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-11.349;DP=802;FS=0.000;HRun=0;HaplotypeScore=94.8754;InbreedingCoeff=0.9634;MQ=75.54;MQ0=0;MQRankSum=-6.770;QD=53.62;ReadPosRankSum=3.336;VQSLOD=7.2144;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,1877	1/1:1,9:10:27.09:589,27,0	0/0:18,0:18:45.15:0,45,699	0/0:17,0:17:46.03:0,46,686	1/1:4,18:23:60.21:1288,60,0	1/1:2,16:18:48.16:1052,48,0	1/1:6,22:29:72.25:1564,72,0	1/1:9,26:35:78.27:1692,78,0	1/1:4,19:23:60.21:1307,60,0	1/1:2,27:30:84.27:1805,84,0	1/1:5,28:34:78.27:1700,78,0	1/1:5,22:27:69.24:1510,69,0	1/1:5,25:32:78.27:1681,78,0	1/1:3,31:36:93.32:2025,93,0	1/1:1,35:36:99:2243,102,0	1/1:5,25:33:72.13:1582,72,0	1/1:7,24:32:72.25:1586,72,0	1/1:1,17:17:48.16:1060,48,0	1/1:7,14:22:57.14:1160,57,0	1/1:2,25:29:72.25:1581,72,0	1/1:12,28:40:78.74:1715,79,0	1/1:3,31:34:84.29:1853,84,0	1/1:1,41:42:99:2515,114,0	1/1:3,38:40:86.88:1913,87,0	1/1:5,23:29:60.21:1324,60,0	1/1:1,29:30:87.30:1914,87,0	1/1:8,29:37:93.32:2032,93,0	1/1:2,2:4:6.02:132,6,0
chr10	78044390	.	G	GCCAAAACGCTGTTAAATTTCTC	122538.74	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-0.996;DP=694;FS=1.913;HRun=0;HaplotypeScore=348.5945;InbreedingCoeff=0.9828;MQ=72.44;MQ0=0;MQRankSum=-14.633;QD=205.26;ReadPosRankSum=3.291;VQSLOD=4.3607;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,151,7637	1/1:3,2:8:11.77:1266,12,0	0/0:21,0:21:51.12:0,51,2020	0/0:23,0:23:60.20:0,60,2296	1/1:19,5:27:63.22:4225,63,0	1/1:12,12:26:69.24:6120,69,0	1/1:30,0:30:87.24:5866,87,0	1/1:47,0:47:99:8415,135,0	1/1:16,4:20:60.21:4447,60,0	1/1:13,7:20:60.21:5470,60,0	1/1:22,3:27:75.26:4957,75,0	1/1:21,3:25:63.22:5440,63,0	1/1:21,7:33:75.26:6317,75,0	1/1:17,3:23:57.20:4529,57,0	1/1:18,6:24:72.25:6046,72,0	1/1:17,9:30:78.27:6689,78,0	1/1:11,3:20:39.13:3543,39,0	1/1:9,0:9:21.03:1466,21,0	1/1:19,3:23:54.19:4061,54,0	1/1:21,6:29:81.28:6223,81,0	1/1:9,2:12:21.07:1413,21,0	1/1:19,4:25:66.18:4535,66,0	1/1:20,11:32:93.32:7992,93,0	1/1:11,5:17:39.13:3272,39,0	1/1:9,7:20:48.16:3967,48,0	1/1:19,8:30:90.27:6703,90,0	1/1:26,6:34:96.33:7862,96,0	1/1:2,4:6:18.06:1717,18,0
chr10	78045484	.	T	TGGGAGTCTGTGGTACATAG	98952.63	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-2.411;DP=632;FS=12.687;HRun=0;HaplotypeScore=264.7056;InbreedingCoeff=0.9599;MQ=75.49;MQ0=0;MQRankSum=-12.929;QD=181.90;ReadPosRankSum=4.099;VQSLOD=3.7321;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,6075	1/1:3,5:9:24.08:1979,24,0	0/0:26,0:27:62.85:0,63,2221	0/0:17,0:17:51.18:0,51,2296	1/1:13,12:29:45.15:4079,45,0	1/1:6,7:14:36.07:2896,36,0	1/1:21,2:27:51.17:3814,51,0	1/1:41,0:41:99:6567,108,0	1/1:14,11:27:63.22:5228,63,0	1/1:15,6:22:60.21:4352,60,0	1/1:10,5:17:30.10:2741,30,0	1/1:12,8:22:48.16:4013,48,0	1/1:11,6:19:51.18:4044,51,0	1/1:16,10:29:78.27:6241,78,0	1/1:15,13:30:75.26:6540,75,0	1/1:18,10:30:72.25:5746,72,0	1/1:15,6:28:54.19:4546,54,0	1/1:6,5:13:33.11:2654,33,0	1/1:12,3:15:42.14:2769,42,0	1/1:15,9:27:54.14:4451,54,0	1/1:9,3:16:18.06:1649,18,0	1/1:10,11:23:45.15:3968,45,0	1/1:7,6:16:33.11:2797,33,0	1/1:12,9:26:51.13:4090,51,0	1/1:12,9:21:54.14:4505,54,0	1/1:9,9:21:57.01:4484,57,0	1/1:12,4:20:54.12:4251,54,0	1/1:1,1:2:6.02:549,6,0
chr10	78046362	.	T	TCCAA	950.63	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.731;DP=740;FS=2.197;HRun=0;HaplotypeScore=116.6946;InbreedingCoeff=0.9980;MQ=67.09;MQ0=0;MQRankSum=-2.149;QD=36.56;ReadPosRankSum=1.011;VQSLOD=3.9861;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,123,1957	0/0:19,0:19:51.15:0,51,809	0/0:26,0:25:48.15:0,48,755	0/0:36,0:32:40.19:0,40,692	0/0:30,0:30:72.20:0,72,1133	0/0:24,0:24:60.16:0,60,933	0/0:22,0:22:48.13:0,48,751	0/0:30,0:30:60.17:0,60,889	0/0:25,0:25:57.19:0,57,949	0/0:30,0:30:72.24:0,72,1193	0/0:14,0:14:30.10:0,30,506	0/0:23,0:23:48.16:0,48,810	0/0:18,0:18:33.07:0,33,502	0/0:28,0:28:60.21:0,60,1008	0/0:35,0:35:93.26:0,93,1475	0/0:19,0:19:45.14:0,45,735	0/0:32,0:32:84.25:0,84,1363	1/1:5,21:25:42.14:1045,42,0	0/0:18,0:18:27.07:0,27,407	0/0:23,0:23:57.17:0,57,903	0/0:22,0:22:57.14:0,57,905	0/0:24,0:24:60.19:0,60,983	0/0:18,0:18:45.14:0,45,726	0/0:35,0:35:84.23:0,84,1337	0/0:26,0:26:69.18:0,69,1060	0/0:33,0:33:78.26:0,78,1280	0/0:34,0:34:75.18:0,75,1175	0/0:13,0:13:39.13:0,39,645
chr10	78047693	.	T	TG	4384.13	PASS	AB=0.992;AC=21;AF=0.375;AN=56;BaseQRankSum=-10.744;DP=717;FS=5.456;HRun=8;HaplotypeScore=128.8869;InbreedingCoeff=0.5322;MQ=69.72;MQ0=13;MQRankSum=1.662;QD=14.28;ReadPosRankSum=-0.042;VQSLOD=3.8545;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:89.82:0,90,793	0/1:10,0:10:4.79:5,0,50	0/0:37,0:32:60.53:0,61,572	0/0:26,0:26:56.95:0,57,502	0/0:23,0:23:32.03:0,32,180	1/1:6,22:27:57.13:643,57,0	1/1:5,30:34:20.29:741,20,0	1/1:5,24:23:29.94:561,30,0	1/1:2,18:19:45.11:506,45,0	0/1:26,0:26:49.25:49,0,76	0/1:16,1:16:20.32:20,0,123	0/0:21,0:21:56.29:0,56,493	0/0:25,0:25:73.19:0,73,615	0/0:28,0:28:18.35:0,18,204	0/1:33,0:33:41.33:41,0,221	1/1:1,19:20:51.15:588,51,0	1/1:3,20:22:38.63:572,39,0	0/1:11,0:11:3.61:39,0,4	0/0:22,0:22:48.01:0,48,438	0/0:34,1:36:94.86:0,95,822	0/0:43,0:43:99:0,117,1055	0/0:21,0:21:49.29:0,49,406	0/0:16,0:16:32.56:0,33,274	0/0:33,0:36:81.05:0,81,687	1/1:8,20:26:42.38:561,42,0	0/1:16,0:16:54.29:54,0,88	0/0:35,0:37:93.97:0,94,823	0/1:10,0:10:2.49:2,0,93
chr10	78048559	.	TGCA	T	17332.22	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=14.432;DP=678;FS=2.778;HRun=0;HaplotypeScore=104.4463;InbreedingCoeff=0.9994;MQ=86.37;MQ0=0;MQRankSum=-5.267;QD=49.66;ReadPosRankSum=3.748;VQSLOD=7.1046;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,2850	1/1:0,15:15:42.14:783,42,0	0/0:27,0:27:81.28:0,81,1904	0/0:21,0:21:60.09:0,60,1224	1/1:0,23:23:57.19:1023,57,0	1/1:0,23:23:60.21:1118,60,0	1/1:0,27:27:69.24:1284,69,0	1/1:0,35:35:99:1903,105,0	1/1:0,19:19:48.16:873,48,0	1/1:0,25:25:75.26:1387,75,0	1/1:0,19:19:48.16:894,48,0	0/0:27,0:27:81.26:0,81,1944	0/0:30,0:30:90.30:0,90,2125	1/1:0,15:15:39.13:723,39,0	1/1:0,32:32:90.14:1655,90,0	1/1:0,22:22:51.17:933,51,0	1/1:0,24:24:66.23:1228,66,0	1/1:0,15:15:42.14:763,42,0	0/0:28,0:28:84.27:0,84,1961	0/0:28,0:28:84.29:0,84,2040	0/0:20,0:20:57.18:0,57,1356	0/0:21,0:21:63.20:0,63,1504	0/0:34,0:34:99:0,102,2451	0/0:19,0:19:57.20:0,57,1405	1/1:0,22:22:57.19:1043,57,0	1/1:0,25:25:72.25:1330,72,0	0/0:35,0:35:99:0,105,2563	1/1:0,8:8:21.07:392,21,0
chr10	78049824	.	AAG	A	649.91	PASS	AB=0.951;AC=13;AF=0.232;AN=56;BaseQRankSum=12.709;DP=617;FS=3.483;HRun=0;HaplotypeScore=98.3251;InbreedingCoeff=0.4849;MQ=71.87;MQ0=2;MQRankSum=-9.917;QD=3.42;ReadPosRankSum=-1.209;VQSLOD=2.1621;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:66.19:0,66,1018	0/0:14,1:15:5.19:0,5,533	0/0:28,0:27:32.69:0,33,470	0/0:28,0:21:9.37:0,9,347	0/1:23,3:26:11.59:12,0,897	0/0:31,2:33:44.27:0,44,1110	0/1:18,0:18:3.81:4,0,448	0/1:30,2:32:10.41:10,0,838	0/0:16,0:16:36.12:0,36,581	0/0:23,0:23:57.17:0,57,846	0/0:26,0:26:60.19:0,60,948	1/1:18,0:18:33.07:159,33,0	1/1:19,0:19:40.56:191,41,0	0/0:16,1:17:5.34:0,5,595	0/0:24,0:24:54.14:0,54,826	0/0:10,0:10:24.08:0,24,390	0/0:30,0:29:72.16:0,72,1082	0/0:22,0:22:54.16:0,54,835	0/1:20,2:22:34.74:35,0,477	0/0:28,0:28:69.22:0,69,1098	0/0:12,0:12:21.07:0,21,341	1/1:16,0:16:28.18:125,28,0	1/1:27,0:27:47.70:227,48,0	0/1:12,0:12:49.69:60,0,50	0/0:25,0:25:32.38:0,32,988	0/0:22,0:22:57.19:0,57,902	0/0:28,0:28:69.22:0,69,1087	0/0:8,0:8:12.02:0,12,170
chr10	78049833	.	AGAGAGAG	A	5167.52	PASS	AB=0.550;AC=9;AF=0.161;AN=56;BaseQRankSum=12.033;DP=574;FS=1.008;HRun=0;HaplotypeScore=135.0901;InbreedingCoeff=0.8654;MQ=66.97;MQ0=2;MQRankSum=-12.155;QD=65.41;ReadPosRankSum=0.947;VQSLOD=4.6603;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.23:0,72,2770	0/0:14,0:14:42.14:0,42,1611	0/0:23,0:22:36.27:0,36,1712	0/0:28,0:21:39.36:0,39,1412	0/0:28,0:28:84.28:0,84,3030	0/0:32,0:32:90.04:0,90,3370	0/0:17,0:17:48.16:0,48,1577	0/0:29,0:29:87.27:0,87,2871	0/0:15,0:15:45.15:0,45,1567	0/0:21,0:21:63.20:0,63,2417	0/0:24,0:24:72.25:0,72,2749	1/1:0,15:15:36.12:992,36,0	1/1:0,18:18:45.15:1234,45,0	0/0:17,0:17:48.16:0,48,1792	0/0:21,0:21:63.20:0,63,2385	0/0:12,0:12:36.11:0,36,1168	0/0:28,0:27:84.27:0,84,3165	0/0:21,0:21:63.22:0,63,2361	0/0:20,0:20:57.15:0,57,1711	0/0:26,0:26:78.25:0,78,3005	0/0:9,0:9:27.09:0,27,937	1/1:0,14:14:36.12:943,36,0	1/1:0,21:21:57.20:1520,57,0	0/1:2,9:11:99:477,0,215	0/0:25,0:25:75.25:0,75,2852	0/0:22,0:22:66.23:0,66,2509	0/0:30,0:30:90.29:0,90,3167	0/0:6,0:6:18.05:0,18,558
chr10	78050254	.	CAAAGAAAGGAAGAAAG	C	6321.39	PASS	AB=0.962;AC=29;AF=0.518;AN=56;BaseQRankSum=-2.001;DP=575;FS=6.204;HRun=0;HaplotypeScore=267.1872;InbreedingCoeff=0.0483;MQ=70.19;MQ0=4;MQRankSum=0.654;QD=14.21;ReadPosRankSum=4.315;VQSLOD=2.8811;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:39.01:0,39,1359	0/1:0,7:7:6.97:131,0,7	0/0:15,0:13:23.05:0,23,241	0/0:14,0:12:11.92:0,12,187	1/1:15,5:20:48.05:1012,48,0	0/1:25,0:25:99:200,0,1591	0/1:16,0:16:99:178,0,164	1/1:21,0:20:15.20:376,15,0	0/1:19,0:19:99:219,0,849	1/1:2,11:13:32.98:541,33,0	1/1:3,10:13:26.82:342,27,0	0/1:33,0:31:99:111,0,1217	0/1:31,0:30:10.93:11,0,669	1/1:23,0:23:54.06:654,54,0	1/1:5,30:35:8.50:410,9,0	0/1:20,0:20:99:164,0,488	0/1:28,0:28:99:223,0,1032	0/1:18,0:18:55.38:55,0,1439	0/0:12,0:12:26.96:0,27,298	0/0:14,0:14:42.09:0,42,763	0/0:12,0:12:27.01:0,27,385	0/1:26,0:23:99:137,0,1060	0/1:24,0:23:76.79:77,0,1343	0/1:22,0:21:99:124,0,691	0/1:22,0:22:55.56:56,0,1928	1/1:4,23:27:65.95:1252,66,0	0/0:37,0:37:99:0,102,1440	1/1:2,0:2:3.01:49,3,0
chr10	78050259	.	AAAGG	A	4860.86	PASS	AB=0.964;AC=28;AF=0.500;AN=56;BaseQRankSum=2.450;DP=569;FS=3.988;HRun=0;HaplotypeScore=146.8011;InbreedingCoeff=-0.1280;MQ=68.06;MQ0=8;MQRankSum=-0.749;QD=10.17;ReadPosRankSum=3.812;VQSLOD=3.8875;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:38.96:0,39,511	0/1:7,0:7:4.26:29,0,4	0/0:14,0:12:23.05:0,23,241	0/0:13,0:11:23.32:0,23,201	1/1:19,0:19:39.46:366,39,0	0/1:26,0:26:99:270,0,209	0/1:16,0:16:7.77:218,0,8	0/1:24,0:21:22.63:379,0,23	0/1:20,0:20:99:289,0,104	1/1:11,0:11:29.94:263,30,0	1/1:12,0:12:23.70:167,24,0	0/1:29,0:27:30.87:369,0,31	0/1:7,22:28:11.04:11,0,166	1/1:19,0:19:44.92:400,45,0	1/1:33,0:33:8.82:103,9,0	0/1:19,0:19:44.31:239,0,44	0/1:28,0:28:99:330,0,113	0/1:20,0:18:72.53:73,0,203	0/0:13,0:13:24.22:0,24,215	0/0:16,0:16:5.21:0,5,210	0/0:11,0:11:26.85:0,27,218	0/1:26,1:24:99:174,0,141	0/1:23,1:23:30.79:276,0,31	0/1:23,2:24:61.04:284,0,61	0/1:23,0:23:95.47:95,0,307	1/1:25,0:25:51.66:495,52,0	0/1:36,0:36:11.56:12,0,513	0/1:6,0:3:17.98:18,0,26
chr10	78050263	.	GAAGAAAGA	G	2272.10	PASS	AB=1.000;AC=16;AF=0.308;AN=52;BaseQRankSum=-2.633;DP=554;FS=1.314;HRun=0;HaplotypeScore=194.1953;InbreedingCoeff=0.5213;MQ=65.54;MQ0=10;MQRankSum=-4.043;QD=12.84;ReadPosRankSum=0.051;VQSLOD=2.5891;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:26:15.05:0,15,541	1/1:7,0:7:2.57:54,3,0	./.	./.	0/1:16,0:16:28.89:243,0,29	0/0:27,0:27:42.02:0,42,970	0/0:14,0:14:9.03:0,9,138	0/0:24,0:21:8.95:0,9,67	0/0:20,0:20:18.06:0,18,505	0/1:11,0:11:10.95:102,0,11	0/1:10,0:10:30.84:45,0,31	0/0:26,0:24:29.98:0,30,521	0/0:28,0:27:12.04:0,12,385	0/0:18,0:18:8.92:0,9,65	1/1:30,0:30:8.57:165,9,0	0/0:15,0:15:17.23:0,17,332	0/0:28,0:28:38.71:0,39,715	0/0:24,0:22:40.88:0,41,901	1/1:13,1:13:5.98:132,6,0	1/1:5,13:18:23.97:376,24,0	1/1:11,0:11:14.88:164,15,0	0/0:25,0:22:33.09:0,33,642	0/0:24,0:23:33.05:0,33,612	0/0:26,0:23:23.59:0,24,321	0/0:21,0:21:48.14:0,48,1191	0/1:24,0:24:96.46:244,0,96	1/1:28,8:36:50.97:922,51,0	0/0:7,0:4:5.97:0,6,94
chr10	78050422	.	AAAAGAAAGAAAG	A	1764.97	PASS	AB=0.727;AC=9;AF=0.173;AN=52;BaseQRankSum=2.768;DP=569;FS=5.949;HRun=0;HaplotypeScore=185.9389;InbreedingCoeff=0.7783;MQ=54.16;MQ0=10;MQRankSum=-5.846;QD=20.06;ReadPosRankSum=0.612;VQSLOD=2.2748;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:57.20:0,57,2969	0/0:4,0:12:22.14:0,22,852	./.	./.	0/0:19,0:33:63.22:0,63,2761	0/0:25,0:25:48.16:0,48,2343	0/0:24,0:23:39.13:0,39,1697	0/0:36,0:30:12.04:0,12,270	0/0:9,0:9:18.06:0,18,839	0/0:11,0:22:45.15:0,45,1975	0/0:11,0:22:33.11:0,33,1200	1/1:4,6:10:12.04:410,12,0	1/1:11,6:16:18.06:607,18,0	0/0:8,0:13:15.04:0,15,635	0/0:14,0:21:30.07:0,30,1156	0/0:18,0:18:27.08:0,27,1391	0/0:26,0:26:48.15:0,48,2334	0/0:13,0:20:12.94:0,13,250	0/0:14,0:18:28.34:0,28,927	0/0:13,0:26:48.16:0,48,1763	0/0:7,0:8:15.05:0,15,489	1/1:14,6:20:12.04:333,12,0	1/1:9,8:17:8.12:278,8,0	0/1:15,9:23:99:288,0,155	0/0:23,0:23:48.16:0,48,2619	0/0:19,0:22:21.06:0,21,717	0/0:15,0:30:29.13:0,29,1331	0/0:5,0:7:6.02:0,6,204
chr10	78051044	.	T	TACACAC	7605.64	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-0.161;DP=755;FS=26.589;HRun=0;HaplotypeScore=189.1531;InbreedingCoeff=0.5827;MQ=52.76;MQ0=10;MQRankSum=-2.273;QD=11.40;ReadPosRankSum=0.181;VQSLOD=2.6559;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:58:90.28:0,90,1423	1/1:2,5:9:12.04:332,12,0	0/1:35,0:16:3.09:3,0,27	0/0:29,0:12:8.70:0,9,91	1/1:8,12:26:11.96:269,12,0	1/1:14,0:21:3.48:58,3,0	1/1:32,0:31:8.47:133,8,0	1/1:30,0:30:14.15:102,14,0	1/1:13,0:25:9.02:184,9,0	1/1:13,15:28:36.07:611,36,0	1/1:8,0:17:6.43:88,6,0	1/1:29,0:28:24.32:237,24,0	1/1:28,0:28:16.53:168,17,0	1/1:12,25:39:43.96:1318,44,0	1/1:9,15:28:23.94:725,24,0	1/1:23,0:23:17.99:264,18,0	1/1:13,1:31:9.03:227,9,0	1/1:14,0:12:10.23:158,10,0	1/1:11,4:16:22.29:434,22,0	1/1:11,8:22:11.78:306,12,0	1/1:38,0:62:13.56:191,14,0	1/1:18,0:18:6.07:20,6,0	1/1:17,0:17:8.31:63,8,0	1/1:36,0:36:15.53:65,16,0	1/1:14,0:24:8.06:141,8,0	1/1:6,11:18:36.07:786,36,0	1/1:9,8:20:14.28:384,14,0	1/1:13,0:15:31.86:337,32,0
chr10	78053143	.	CGTGTGTGTGTGTGTGTGTGTGTGTGTGT	C	7765.37	PASS	AB=0.708;AC=14;AF=0.250;AN=56;BaseQRankSum=9.735;DP=625;FS=0.000;HRun=0;HaplotypeScore=391.5242;InbreedingCoeff=0.7437;MQ=58.52;MQ0=9;MQRankSum=-6.366;QD=44.37;ReadPosRankSum=2.757;VQSLOD=2.3968;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:36:56.33:0,56,4795	1/1:3,7:10:9.03:651,9,0	0/0:24,0:16:6.02:0,6,225	0/0:24,0:16:15.03:0,15,506	1/1:18,12:30:6.02:406,6,0	0/0:14,0:18:36.56:0,37,2664	0/0:13,0:16:31.64:0,32,2044	0/0:28,0:27:39.13:0,39,2669	0/0:16,0:19:48.14:0,48,3534	1/1:10,16:25:27.07:1243,27,0	1/1:12,9:21:8.98:454,9,0	0/0:26,0:26:45.63:0,46,4157	0/0:17,0:19:42.14:0,42,3893	0/1:16,8:24:61.38:425,0,61	1/1:12,19:33:42.14:2985,42,0	0/0:15,0:22:40.06:0,40,3225	0/0:21,0:23:49.05:0,49,4481	0/0:14,0:14:24.08:0,24,967	0/0:19,0:19:30.09:0,30,1453	0/0:13,0:17:33.11:0,33,1858	0/0:29,0:29:26.95:0,27,1681	0/0:15,0:19:30.10:0,30,2076	0/0:15,0:17:37.01:0,37,3798	0/0:22,0:34:60.16:0,60,5389	0/0:21,0:22:30.09:0,30,2349	1/1:11,17:28:36.30:1389,36,0	0/0:12,0:20:30.10:0,30,2261	0/1:1,1:2:99:211,0,318
chr10	78058807	.	AT	A	4187.58	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.212;DP=588;FS=3.164;HRun=6;HaplotypeScore=57.2385;InbreedingCoeff=0.9808;MQ=80.05;MQ0=0;MQRankSum=-1.162;QD=26.50;ReadPosRankSum=1.012;VQSLOD=3.9418;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.24:0,87,1109	0/0:3,0:3:6.02:0,6,79	0/0:26,0:22:37.13:0,37,496	0/0:26,0:24:42.27:0,42,531	0/0:26,0:26:66.15:0,66,793	1/1:1,20:21:57.14:612,57,0	1/1:3,20:23:54.13:580,54,0	1/1:3,24:27:72.12:741,72,0	1/1:1,19:20:51.13:548,51,0	0/0:23,0:23:63.19:0,63,806	0/0:16,0:16:42.14:0,42,552	0/0:22,0:22:66.17:0,66,812	0/0:23,0:23:57.08:0,57,697	0/0:28,0:28:81.23:0,81,1034	0/0:31,0:31:87.28:0,87,1142	1/1:1,28:29:69.17:739,69,0	1/1:0,25:25:60.15:645,60,0	0/0:18,0:18:48.16:0,48,631	0/0:15,0:15:42.07:0,42,530	0/0:10,0:10:27.07:0,27,329	0/0:16,0:16:45.12:0,45,562	0/0:28,0:28:78.22:0,78,984	0/0:14,0:14:36.07:0,36,417	0/0:16,0:16:48.12:0,48,600	1/1:1,12:13:30.08:322,30,0	0/0:23,0:23:63.19:0,63,793	0/0:20,0:18:57.18:0,57,744	0/0:15,0:15:39.10:0,39,485
chr10	78059974	.	C	CTGTGTCAGTGAG	33844.02	PASS	AB=0.931;AC=23;AF=0.411;AN=56;BaseQRankSum=-10.030;DP=788;FS=22.854;HRun=0;HaplotypeScore=248.0705;InbreedingCoeff=0.9259;MQ=85.35;MQ0=0;MQRankSum=-19.442;QD=103.18;ReadPosRankSum=3.265;VQSLOD=3.3355;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,4685	1/1:0,8:13:27.08:1458,27,0	0/0:27,0:27:64.60:0,65,2297	0/0:34,0:34:93.15:0,93,3060	1/1:3,14:26:39.13:2218,39,0	0/0:22,0:22:66.21:0,66,2502	0/0:28,0:28:84.29:0,84,3183	0/0:34,0:34:96.31:0,96,3303	0/0:17,0:17:51.16:0,51,1857	1/1:5,12:26:72.14:3603,72,0	1/1:3,12:19:39.13:2300,39,0	1/1:5,25:35:81.28:5003,81,0	1/1:10,14:32:69.24:3945,69,0	1/1:6,16:32:57.20:3487,57,0	1/1:8,23:46:90.31:5358,90,0	0/0:34,0:34:99:0,102,3823	0/0:27,0:27:81.26:0,81,2879	0/0:26,0:26:78.25:0,78,2843	0/0:32,0:32:93.28:0,93,3083	0/0:24,0:24:69.24:0,69,2583	0/0:47,0:47:99:0,134,4868	1/1:4,16:31:51.18:2925,51,0	1/1:4,8:21:33.07:1849,33,0	1/1:4,10:19:29.91:1586,30,0	0/0:23,0:23:69.17:0,69,2322	0/1:25,1:27:99:112,0,2438	0/0:26,0:26:78.27:0,78,3018	0/0:16,0:16:45.07:0,45,1493
chr10	78062548	.	G	GAAA	8207.27	PASS	AB=0.774;AC=36;AF=0.643;AN=56;BaseQRankSum=-9.039;DP=643;FS=3.068;HRun=9;HaplotypeScore=111.3254;InbreedingCoeff=0.8735;MQ=72.11;MQ0=10;MQRankSum=1.162;QD=19.09;ReadPosRankSum=-4.265;VQSLOD=2.0105;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:0.19:0,0,324	1/1:1,7:9:15.01:256,15,0	0/0:26,0:18:20.49:0,20,262	0/0:23,0:11:14.66:0,15,142	1/1:28,5:32:80.17:1138,80,0	1/1:2,19:21:27.09:533,27,0	1/1:5,10:16:23.99:318,24,0	1/1:12,19:34:67.82:908,68,0	1/1:6,13:18:20.99:355,21,0	1/1:3,23:27:63.06:849,63,0	1/1:4,13:17:38.87:495,39,0	1/1:1,0:22:23.91:184,24,0	1/1:6,0:30:29.89:230,30,0	1/1:7,14:22:15.04:296,15,0	1/1:3,19:25:48.03:797,48,0	1/1:2,16:18:27.06:495,27,0	1/1:3,16:23:27.01:441,27,0	0/0:21,0:21:40.52:0,41,349	0/0:24,0:23:52.38:0,52,467	0/0:27,0:27:44.63:0,45,357	0/0:13,0:13:29.92:0,30,278	1/1:1,1:25:44.73:436,45,0	1/1:3,0:22:25.05:175,25,0	1/1:5,1:19:21.41:198,21,0	0/1:3,3:17:25.91:104,0,26	0/0:26,0:26:41.22:0,41,315	0/0:35,0:34:62.74:0,63,522	0/0:17,0:17:43.09:0,43,382
chr10	78062556	.	AAG	A	3032.25	PASS	AB=0.621;AC=12;AF=0.214;AN=56;BaseQRankSum=-4.908;DP=650;FS=11.144;HRun=0;HaplotypeScore=106.1511;InbreedingCoeff=0.8012;MQ=68.47;MQ0=10;MQRankSum=-0.002;QD=19.56;ReadPosRankSum=4.771;VQSLOD=3.2153;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:39:0,39,506	0/0:7,0:7:14.71:0,15,154	0/0:32,0:19:22.22:0,22,282	0/0:28,0:13:20.70:0,21,200	0/0:32,0:31:48.06:0,48,556	0/0:23,0:23:39.06:0,39,406	0/0:23,0:21:12.76:0,13,325	0/0:31,0:31:45.54:0,46,488	0/0:20,0:18:21.04:0,21,223	0/0:29,0:29:36.07:0,36,391	0/0:14,0:14:24.06:0,24,261	0/0:24,0:24:36.07:0,36,388	0/0:26,0:26:33.09:0,33,370	0/0:18,0:18:18.05:0,18,200	0/0:28,0:28:54.11:0,54,569	0/0:16,0:16:33.06:0,33,343	0/0:25,0:25:29.68:0,30,280	0/1:8,13:21:5.46:287,0,5	1/1:9,14:22:51.05:541,51,0	1/1:3,21:24:62.95:644,63,0	0/1:6,9:15:21.87:193,0,22	0/0:28,0:28:56.96:0,57,567	0/0:24,0:24:36.02:0,36,383	0/0:20,0:20:33.06:0,33,366	0/0:18,0:18:18:0,18,191	1/1:11,13:24:41.60:463,42,0	1/1:7,24:30:54.14:643,54,0	1/1:4,12:17:38.95:443,39,0
chr10	78062557	.	AG	A	1117.61	PASS	AB=0.976;AC=16;AF=0.286;AN=56;BaseQRankSum=1.327;DP=618;FS=4.906;HRun=1;HaplotypeScore=99.3835;InbreedingCoeff=-0.0269;MQ=69.45;MQ0=10;MQRankSum=3.631;QD=3.65;ReadPosRankSum=0.787;VQSLOD=0.3761;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:46.32:0,46,504	0/1:7,0:7:2.24:2,0,79	0/0:34,0:21:41.11:0,41,444	0/0:29,0:13:25.90:0,26,253	0/1:25,6:30:99:137,0,305	0/0:21,0:21:38.46:0,38,264	0/0:22,2:22:18.15:0,18,300	0/1:26,0:26:56.95:57,0,319	0/0:16,2:16:18.14:0,18,146	0/1:24,0:24:99:172,0,284	0/0:10,0:10:6.56:0,7,149	0/0:23,0:23:35.49:0,35,240	0/0:25,0:25:32.43:0,32,224	0/0:19,0:19:23.62:0,24,163	0/0:25,0:26:52.96:0,53,383	0/0:15,0:15:32.54:0,33,230	0/0:24,0:24:16.07:0,16,167	0/1:21,0:21:44.71:45,0,101	0/1:23,0:22:68.08:168,0,68	1/1:24,0:24:34.13:253,34,0	0/1:14,0:14:27.59:28,0,112	0/1:29,0:29:43.80:44,0,311	0/1:24,0:24:3.86:4,0,245	0/0:17,0:17:32.60:0,33,256	0/1:13,1:14:8.01:8,0,160	1/1:21,1:22:14.35:158,14,0	0/1:30,0:29:22.06:119,0,22	0/1:16,1:17:35.97:88,0,36
chr10	78063596	.	AACAC	A	6200.42	PASS	AC=48;AF=0.923;AN=52;BaseQRankSum=4.195;DP=607;FS=2.703;HRun=0;HaplotypeScore=155.9212;InbreedingCoeff=0.6191;MQ=62.66;MQ0=6;MQRankSum=-3.036;QD=12.13;ReadPosRankSum=3.133;VQSLOD=4.3652;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:53.92:0,54,1104	1/1:4,1:14:1.59:61,2,0	./.	./.	1/1:7,3:22:4.18:52,4,0	1/1:10,13:27:21.76:422,22,0	1/1:13,10:24:13.59:174,14,0	1/1:22,0:20:9.89:87,10,0	1/1:10,9:20:26.89:403,27,0	1/1:11,2:23:28.43:295,28,0	1/1:9,4:21:7.06:127,7,0	1/1:4,14:21:36.11:529,36,0	1/1:10,14:25:33.11:499,33,0	1/1:10,1:20:12.77:73,13,0	1/1:11,2:24:24.49:206,24,0	1/1:8,18:26:27.09:425,27,0	1/1:9,9:18:27.09:426,27,0	1/1:3,0:8:5.90:55,6,0	1/1:11,0:16:13.83:116,14,0	1/1:12,0:29:33.04:307,33,0	0/0:18,0:29:2.99:0,3,24	1/1:12,13:26:23.23:337,23,0	1/1:6,14:21:27.09:407,27,0	1/1:4,7:11:12.04:189,12,0	1/1:10,13:25:24.04:333,24,0	1/1:7,0:22:22.51:242,23,0	1/1:14,0:26:15.29:236,15,0	1/1:2,0:15:21.02:196,21,0
chr10	78063778	.	CAA	C	1388.52	PASS	AB=0.933;AC=9;AF=0.161;AN=56;BaseQRankSum=-3.752;DP=563;FS=1.642;HRun=13;HaplotypeScore=109.6409;InbreedingCoeff=0.8005;MQ=65.74;MQ0=0;MQRankSum=0.571;QD=14.31;ReadPosRankSum=1.061;VQSLOD=2.8144;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:50.63:0,51,650	0/0:10,0:11:32.59:0,33,429	0/0:26,0:23:29.03:0,29,310	0/1:13,0:14:12.65:13,0,242	0/0:27,0:29:62.64:0,63,771	0/0:24,0:24:56.81:0,57,267	0/0:17,0:17:38.30:0,38,190	0/0:30,0:30:44.50:0,45,232	0/0:25,0:25:62.28:0,62,276	0/0:23,0:24:59.44:0,59,713	0/0:20,0:21:51.83:0,52,599	0/0:2,0:15:12.02:0,12,115	0/0:4,0:20:9.02:0,9,92	0/0:17,0:18:47.58:0,48,578	0/0:18,1:19:16.03:0,16,458	0/0:21,0:21:38.82:0,39,174	0/0:22,0:24:45.78:0,46,207	0/0:2,0:12:17.95:0,18,186	1/1:6,12:21:32.41:334,32,0	1/1:6,15:22:31.19:368,31,0	1/1:3,12:16:35.73:332,36,0	0/0:1,0:8:17.89:0,18,153	0/0:4,0:12:5.90:0,6,41	0/0:1,0:7:6.01:0,6,57	0/0:26,0:26:46.62:0,47,197	0/0:21,0:37:86.72:0,87,773	1/1:4,19:24:35:505,35,0	0/0:9,0:19:48.06:0,48,488
chr10	78063780	.	A	AC	4029.73	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=5.818;DP=571;FS=4.145;HRun=0;HaplotypeScore=97.2809;InbreedingCoeff=0.9160;MQ=65.76;MQ0=0;MQRankSum=-1.271;QD=21.67;ReadPosRankSum=4.133;VQSLOD=5.3219;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:53.44:0,53,613	0/0:11,0:11:32.12:0,32,398	0/0:27,0:24:59.63:0,60,594	0/0:14,0:14:35.87:0,36,355	0/0:27,0:27:77.72:0,78,889	1/1:1,23:24:65.82:590,66,0	1/1:5,13:18:48.50:434,49,0	1/1:13,20:33:82.72:714,83,0	1/1:2,24:26:66.51:612,67,0	0/0:25,0:25:68.96:0,69,790	0/0:20,0:20:58.35:0,58,651	0/0:15,0:15:14.08:0,14,81	0/0:20,0:20:17.62:0,18,131	0/0:18,0:18:54.05:0,54,610	0/0:18,0:18:48.04:0,48,523	1/1:7,15:22:62.05:518,62,0	1/1:6,19:25:59.28:562,59,0	0/1:12,0:12:0.93:1,0,50	0/0:22,0:22:16.28:0,16,304	0/0:21,0:21:36.27:0,36,347	0/0:16,0:16:47.48:0,47,331	0/0:9,0:9:20.98:0,21,130	0/0:13,0:13:11.38:0,11,74	0/0:6,0:6:5.83:0,6,32	1/1:7,19:26:70.94:600,71,0	0/0:38,0:38:51.58:0,52,484	0/0:26,0:26:36.48:0,36,380	0/0:19,0:19:24.26:0,24,245
chr10	78063782	.	A	AC	2341.08	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=9.535;DP=567;FS=8.021;HRun=0;HaplotypeScore=99.0849;InbreedingCoeff=0.9053;MQ=65.77;MQ0=1;MQRankSum=-1.770;QD=12.45;ReadPosRankSum=5.021;VQSLOD=4.5418;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:50.93:0,51,613	0/0:11,0:11:32.12:0,32,405	0/0:24,0:20:40.36:0,40,453	0/0:14,0:14:35.81:0,36,352	0/0:24,0:24:68.78:0,69,824	1/1:5,19:24:40.39:337,40,0	1/1:7,13:20:22.78:304,23,0	1/1:15,19:34:43.59:456,44,0	1/1:3,24:27:59.71:449,60,0	0/0:24,0:24:69.06:0,69,806	0/0:21,0:21:61.35:0,61,682	0/0:14,0:14:14.42:0,14,91	0/0:21,0:21:14.76:0,15,112	0/0:18,0:18:54.06:0,54,618	0/0:16,0:16:45.07:0,45,505	1/1:7,15:22:49.20:299,49,0	1/1:6,19:25:35.35:388,35,0	0/1:11,0:11:3.89:4,0,33	0/0:23,0:23:62.48:0,62,459	0/0:23,0:23:65.66:0,66,496	0/0:15,0:15:44.77:0,45,339	0/0:9,0:9:18.30:0,18,115	0/0:13,0:13:14.83:0,15,112	0/0:6,0:6:5.91:0,6,38	1/1:6,19:25:25.46:302,25,0	0/0:37,0:37:48.74:0,49,462	0/0:28,0:28:77.08:0,77,568	0/0:19,0:19:23.81:0,24,248
chr10	78064519	.	A	AT	6274.12	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-17.917;DP=732;FS=0.672;HRun=5;HaplotypeScore=83.4851;InbreedingCoeff=0.9929;MQ=91.38;MQ0=0;MQRankSum=-6.744;QD=35.65;ReadPosRankSum=1.980;VQSLOD=4.3725;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,132,1419	0/0:4,0:4:12.03:0,12,129	0/0:28,0:28:63.68:0,64,737	0/0:38,0:39:92.92:0,93,959	0/0:25,0:25:75.19:0,75,806	1/1:0,30:30:84.27:1105,84,0	1/1:0,25:25:66.21:869,66,0	1/1:2,26:28:78.25:1024,78,0	1/1:1,14:15:42.14:553,42,0	0/0:34,0:34:96.24:0,96,1028	0/0:22,0:22:60.15:0,60,644	0/0:19,0:19:57.14:0,57,613	0/0:21,0:21:63.12:0,63,658	0/0:29,0:29:81.17:0,81,852	0/0:35,0:35:93.23:0,93,999	1/1:1,23:24:63.20:829,63,0	1/1:0,36:36:99:1303,99,0	0/0:17,0:17:51.06:0,51,519	0/0:23,0:23:60.15:0,60,643	0/0:23,0:23:66.17:0,66,709	0/0:36,0:36:99:0,105,1128	0/0:33,0:33:96.23:0,96,1025	0/0:22,0:22:63.14:0,63,669	0/0:38,0:38:99:0,105,1128	1/1:1,17:18:45.15:592,45,0	0/0:27,0:27:75.19:0,75,806	0/0:25,0:25:63.14:0,63,669	0/0:7,0:7:18.04:0,18,193
chr10	78064995	.	C	CT	1877.88	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-7.857;DP=612;FS=3.586;HRun=9;HaplotypeScore=54.8193;InbreedingCoeff=0.9709;MQ=70.65;MQ0=3;MQRankSum=0.144;QD=19.56;ReadPosRankSum=0.856;VQSLOD=3.9918;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:45:88.16:0,88,867	0/0:8,0:8:20.99:0,21,182	0/0:19,0:14:16.24:0,16,175	0/0:13,0:10:8:0,8,165	0/0:21,0:21:53.98:0,54,468	0/0:22,0:22:62.95:0,63,538	0/0:28,0:28:74.95:0,75,647	0/0:37,0:36:82.49:0,82,703	0/0:16,0:17:50.03:0,50,422	0/0:30,0:30:77.98:0,78,677	0/0:19,0:19:56.99:0,57,495	0/0:22,0:22:56.95:0,57,488	0/0:15,0:15:20.68:0,21,336	0/0:22,0:22:56.98:0,57,495	0/0:22,0:22:59.97:0,60,521	0/0:16,0:16:44.99:0,45,390	0/0:32,0:32:77.97:0,78,677	0/0:23,0:22:59.93:0,60,514	1/1:6,21:27:66.18:726,66,0	1/1:6,17:23:26.76:490,27,0	1/1:4,23:27:42.10:457,42,0	0/0:10,0:10:23.98:0,24,208	0/0:18,0:18:38.99:0,39,338	0/0:26,0:26:74.97:0,75,647	0/0:21,1:22:17.79:0,18,383	0/0:20,0:20:53.98:0,54,469	1/1:4,14:18:33.09:365,33,0	0/0:9,0:9:23.98:0,24,208
chr10	78066283	.	G	GGT	7269.42	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=0.926;DP=497;FS=4.565;HRun=0;HaplotypeScore=88.8066;InbreedingCoeff=0.9346;MQ=75.73;MQ0=1;MQRankSum=-2.935;QD=23.08;ReadPosRankSum=2.908;VQSLOD=5.4177;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:45.10:0,45,523	1/1:3,7:10:30.10:479,30,0	0/0:25,0:22:41.95:0,42,464	0/0:30,0:28:20.33:0,20,289	1/1:3,6:10:21:312,21,0	1/1:13,0:13:29.68:237,30,0	1/1:26,0:26:29.96:254,30,0	1/1:21,0:21:41.77:340,42,0	1/1:16,0:16:35.96:307,36,0	1/1:5,13:18:4.60:538,5,0	1/1:2,13:15:21.01:332,21,0	1/1:4,10:14:24.08:385,24,0	1/1:7,6:13:15.05:240,15,0	1/1:4,10:14:26.88:439,27,0	1/1:2,15:17:1.65:544,2,0	1/1:18,0:18:29.93:263,30,0	1/1:39,0:39:92.95:800,93,0	0/0:13,0:13:33.03:0,33,366	0/0:13,0:15:31.70:0,32,309	0/0:13,0:13:30.08:0,30,359	0/0:29,0:29:54.16:0,54,663	1/1:3,9:12:15.05:246,15,0	1/1:4,12:16:33.11:541,33,0	1/1:4,18:22:45.15:738,45,0	1/1:21,0:21:32.83:275,33,0	0/0:9,0:9:15:0,15,158	0/0:22,0:22:48.08:0,48,545	0/0:7,0:7:12.04:0,12,150
chr10	78066296	.	G	GTGT	7396.55	PASS	AB=0.983;AC=29;AF=0.518;AN=56;BaseQRankSum=-1.684;DP=494;FS=0.783;HRun=0;HaplotypeScore=91.5306;InbreedingCoeff=0.3808;MQ=68.64;MQ0=7;MQRankSum=-2.360;QD=21.75;ReadPosRankSum=6.601;VQSLOD=4.6281;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.15:0,51,836	0/1:10,0:11:4.92:40,0,5	0/0:23,0:22:63.18:0,63,931	0/0:24,0:21:49.74:0,50,639	1/1:10,1:11:13.34:75,13,0	1/1:0,14:19:28.83:582,29,0	1/1:0,22:24:30.10:692,30,0	1/1:1,21:24:63.20:1203,63,0	1/1:1,17:19:36.12:844,36,0	0/1:15,0:15:59.45:71,0,59	0/1:15,0:15:25.90:26,0,27	0/1:15,0:15:23.40:23,0,114	0/1:12,0:13:6.45:6,0,156	0/1:14,0:14:35.36:35,0,68	0/1:20,0:20:49.61:50,0,93	1/1:2,13:18:30.10:683,30,0	1/1:0,37:39:93.32:2181,93,0	0/0:12,0:12:36.09:0,36,587	0/0:15,0:15:42.14:0,42,650	0/0:13,0:13:36.12:0,36,608	0/0:21,0:21:60.18:0,60,1070	1/1:10,0:10:10.85:37,11,0	0/1:15,0:15:38.61:50,0,39	1/1:19,0:19:1.08:82,1,0	1/1:1,16:22:32.47:716,32,0	0/1:12,0:12:0.50:0,0,251	0/0:19,0:19:57.19:0,57,989	0/0:7,0:7:18.04:0,18,268
chr10	78067743	.	GT	G	10790.20	PASS	AB=0.900;AC=43;AF=0.768;AN=56;BaseQRankSum=2.727;DP=646;FS=2.582;HRun=9;HaplotypeScore=71.3507;InbreedingCoeff=0.8677;MQ=81.53;MQ0=0;MQRankSum=1.050;QD=21.67;ReadPosRankSum=3.224;VQSLOD=5.7458;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,2:18:12.97:13,0,353	1/1:2,9:11:22.86:241,23,0	0/0:24,0:23:53.89:0,54,545	0/0:27,0:25:2.84:0,3,338	1/1:4,32:36:93.04:851,93,0	1/1:3,16:19:48.02:439,48,0	1/1:0,18:18:48.03:439,48,0	1/1:0,15:15:44.99:402,45,0	1/1:3,17:20:42.01:383,42,0	1/1:2,33:35:98.32:864,98,0	1/1:2,25:27:69.02:631,69,0	1/1:2,20:22:57.03:522,57,0	1/1:4,26:30:75.02:683,75,0	1/1:2,19:21:51.03:467,51,0	1/1:1,21:22:63.03:577,63,0	1/1:5,16:21:45.01:412,45,0	1/1:0,21:21:56.99:513,57,0	1/1:0,13:13:35.96:320,36,0	0/0:21,0:21:60.11:0,60,647	0/0:25,0:26:69.02:0,69,766	0/0:17,0:17:45.08:0,45,495	1/1:2,25:27:41.55:552,42,0	1/1:7,21:28:54.02:494,54,0	1/1:4,16:20:39.01:357,39,0	1/1:2,25:27:69.62:660,70,0	1/1:7,22:29:34.40:563,34,0	0/0:33,0:33:93.25:0,93,1045	1/1:2,16:18:45.01:407,45,0
chr10	78070311	.	C	CT	583.15	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=5.565;DP=599;FS=3.371;HRun=3;HaplotypeScore=61.5676;InbreedingCoeff=0.4510;MQ=61.46;MQ0=0;MQRankSum=-0.219;QD=8.84;ReadPosRankSum=0.859;VQSLOD=1.0461;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.22:0,84,979	0/0:4,0:4:12.04:0,12,144	0/0:12,0:12:28.27:0,28,290	0/0:10,0:7:17.94:0,18,174	0/0:22,0:22:60.18:0,60,718	0/0:28,0:28:81.16:0,81,925	0/0:9,0:9:27.07:0,27,312	0/0:32,0:31:78.21:0,78,906	0/0:24,0:24:69.14:0,69,772	0/0:31,0:31:84.14:0,84,955	0/0:25,0:25:60.13:0,60,661	0/0:22,0:22:63.08:0,63,694	0/0:25,0:25:72.19:0,72,846	0/0:14,0:14:42.12:0,42,490	0/0:29,0:29:79.46:0,79,908	0/0:20,0:20:57.14:0,57,651	0/0:28,0:28:78.19:0,78,896	1/1:3,17:20:42.14:585,42,0	0/0:20,0:20:54.14:0,54,623	0/0:26,0:26:75.11:0,75,829	0/0:16,0:16:39.12:0,39,466	0/0:19,0:19:48.11:0,48,545	0/0:17,0:17:51.09:0,51,554	0/0:21,0:21:60.13:0,60,671	0/0:24,0:24:65.11:0,65,764	0/1:36,0:36:41.65:88,0,42	0/0:24,0:24:72.20:0,72,841	0/1:10,0:10:25.84:26,0,31
chr10	78070314	.	T	TA	1260.22	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.533;DP=593;FS=2.508;HRun=10;HaplotypeScore=59.1987;InbreedingCoeff=0.9790;MQ=61.89;MQ0=0;MQRankSum=0.044;QD=18.81;ReadPosRankSum=-0.230;VQSLOD=4.2643;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:86.87:0,87,710	0/0:5,0:5:11.97:0,12,98	0/0:11,0:11:23.15:0,23,176	0/0:10,0:8:15.81:0,16,119	0/0:22,0:22:62.91:0,63,514	0/0:28,0:28:74.78:0,75,604	0/0:9,0:9:23.97:0,24,197	0/0:31,0:30:77.43:0,77,616	0/0:23,0:23:53.93:0,54,443	0/0:31,0:31:77.86:0,78,637	0/0:25,0:25:47.56:0,48,374	0/0:23,0:23:56.74:0,57,454	0/0:23,0:24:70.96:0,71,571	0/0:15,0:15:44.93:0,45,365	0/0:27,0:27:56.65:0,57,551	0/0:20,0:20:50.93:0,51,419	0/0:29,0:29:74.86:0,75,610	1/1:19,0:19:24.48:226,24,0	0/0:18,0:18:47.87:0,48,387	0/0:25,0:25:56.92:0,57,468	0/0:13,0:13:38.96:0,39,320	0/0:18,0:18:41.90:0,42,339	0/0:18,0:18:38.94:0,39,320	0/0:22,0:22:53.47:0,53,417	0/0:25,0:25:65.89:0,66,542	1/1:6,32:38:93.22:984,93,0	0/0:24,0:24:65.92:0,66,542	1/1:2,8:10:18.05:192,18,0
chr10	78070443	.	C	CA	2712.10	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.724;DP=632;FS=6.323;HRun=1;HaplotypeScore=60.1233;InbreedingCoeff=0.9963;MQ=89.60;MQ0=0;MQRankSum=-2.818;QD=39.88;ReadPosRankSum=3.583;VQSLOD=4.2818;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1441	0/0:6,0:6:18.06:0,18,234	0/0:27,0:27:66.21:0,66,843	0/0:26,0:26:65.67:0,66,800	0/0:23,0:23:63.20:0,63,818	0/0:30,0:30:87.28:0,87,1130	0/0:14,0:14:42.14:0,42,545	0/0:30,0:30:87.28:0,87,1117	0/0:18,0:18:54.18:0,54,701	0/0:23,0:23:69.20:0,69,873	0/0:22,0:22:63.18:0,63,789	0/0:16,0:16:45.15:0,45,583	0/0:26,0:26:78.25:0,78,1012	0/0:36,0:36:99:0,108,1364	0/0:22,0:22:66.19:0,66,828	0/0:24,0:24:72.21:0,72,908	0/0:22,0:22:66.21:0,66,855	1/1:0,30:30:84.28:1259,84,0	0/0:12,0:12:36.12:0,36,468	0/0:19,0:19:57.17:0,57,725	0/0:29,0:29:87.28:0,87,1130	0/0:14,0:14:36.12:0,36,467	0/0:18,0:18:48.14:0,48,608	0/0:41,0:41:99:0,117,1500	0/0:9,0:9:24.08:0,24,311	1/1:0,23:23:69.23:1034,69,0	0/0:19,0:18:54.18:0,54,701	1/1:1,14:15:39.11:563,39,0
chr10	78070995	.	TG	T	698.95	PASS	AB=0.591;AC=5;AF=0.089;AN=56;BaseQRankSum=2.315;DP=312;FS=4.895;HRun=1;HaplotypeScore=62.8999;InbreedingCoeff=0.7219;MQ=69.96;MQ0=2;MQRankSum=-4.516;QD=23.30;ReadPosRankSum=-0.268;VQSLOD=3.4236;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.25:0,78,1118	0/0:4,0:4:12.04:0,12,176	0/0:14,1:10:8.61:0,9,155	0/0:19,0:14:16.56:0,17,306	0/0:15,0:15:38.96:0,39,516	0/0:10,0:10:27.09:0,27,394	0/0:12,0:12:36.08:0,36,467	0/0:20,0:20:54.18:0,54,789	0/0:7,0:7:15.04:0,15,194	0/0:8,0:8:24.08:0,24,352	0/0:4,0:4:12.04:0,12,175	0/0:9,0:8:18.06:0,18,263	0/0:17,0:17:42.07:0,42,584	0/0:12,0:12:33.03:0,33,437	0/0:9,0:9:24.08:0,24,350	0/0:11,0:10:29.98:0,30,387	0/0:10,0:10:24.08:0,24,336	1/1:1,7:8:24.03:279,24,0	0/0:11,0:11:33.10:0,33,450	0/0:11,0:10:30.10:0,30,430	0/0:4,0:4:12.04:0,12,175	0/0:9,0:9:27.07:0,27,375	0/0:7,0:7:21.07:0,21,306	0/0:5,0:5:12.04:0,12,176	0/0:14,0:14:39.13:0,39,570	0/1:4,9:13:8.64:339,0,9	0/0:13,0:12:39.05:0,39,541	1/1:2,7:8:12.89:206,13,0
chr10	78071019	.	G	GTTTTTTTGTT	3433.57	PASS	AB=0.522;AC=19;AF=0.339;AN=56;BaseQRankSum=1.343;DP=378;FS=0.000;HRun=0;HaplotypeScore=132.1758;InbreedingCoeff=-0.2466;MQ=69.55;MQ0=4;MQRankSum=-1.929;QD=14.74;ReadPosRankSum=-9.017;VQSLOD=-0.0665;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.26:0,78,2041	0/0:1,0:7:12.47:0,12,110	0/0:16,0:7:3.73:0,4,121	0/0:22,0:16:8.47:0,8,220	0/1:2,0:14:52.67:53,0,181	0/1:2,0:14:7.84:8,0,163	0/1:2,0:14:35.08:205,0,35	0/1:3,0:24:99:275,0,165	0/1:1,0:11:63.51:95,0,64	0/1:1,0:14:94.74:311,0,95	0/1:1,0:6:20.39:20,0,52	0/0:2,0:9:8.64:0,9,138	0/1:0,0:17:67.22:67,0,209	0/1:1,0:13:42.27:42,0,124	0/1:1,0:16:49.92:50,0,164	0/1:0,0:12:6.14:6,0,190	0/1:0,0:12:70.33:70,0,140	0/0:2,0:14:2.77:0,3,255	0/0:15,0:15:36.09:0,36,685	0/0:12,0:11:8.70:0,9,697	0/0:7,0:7:15.05:0,15,407	0/1:2,0:10:71.23:71,0,139	0/0:1,0:5:12:0,12,109	0/1:0,0:7:35.86:36,0,91	0/1:0,0:21:50.21:50,0,308	1/1:5,4:21:60.20:1821,60,0	0/0:9,0:10:27.09:0,27,767	1/1:4,0:4:9.03:254,9,0
chr10	78071488	.	TAA	T	6465.91	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=16.358;DP=821;FS=1.528;HRun=2;HaplotypeScore=112.2129;InbreedingCoeff=1.0000;MQ=57.63;MQ0=6;MQRankSum=3.226;QD=42.26;ReadPosRankSum=2.981;VQSLOD=4.9657;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,153,2880	0/0:15,0:15:45.15:0,45,914	./.	./.	0/0:32,0:32:96.32:0,96,1915	0/0:24,0:24:72.21:0,72,1385	0/0:39,0:39:99:0,105,2002	0/0:33,0:25:72.19:0,72,1336	0/0:35,0:35:99:0,102,2061	0/0:30,0:30:87.28:0,87,1672	0/0:19,0:19:53.96:0,54,1060	1/1:0,35:35:78.27:1270,78,0	1/1:0,33:33:96.33:1562,96,0	0/0:35,0:35:99:0,105,2041	0/0:47,0:47:99:0,138,2731	0/0:34,0:34:99:0,102,2021	0/0:42,0:42:99:0,126,2450	0/0:40,0:40:99:0,120,2319	0/0:15,0:12:36.10:0,36,692	0/0:30,0:30:90.29:0,90,1748	0/0:43,0:43:99:0,129,2540	1/1:0,25:25:60.20:978,60,0	1/1:0,23:23:69.15:1092,69,0	1/1:0,37:37:96.33:1564,96,0	0/0:24,0:24:72.23:0,72,1393	0/0:31,0:30:90.29:0,90,1790	0/0:23,0:23:69.22:0,69,1320	0/0:17,0:17:51.18:0,51,1035
chr10	78072624	.	CT	C	706.26	PASS	AB=0.895;AC=5;AF=0.089;AN=56;BaseQRankSum=7.236;DP=667;FS=2.280;HRun=8;HaplotypeScore=63.3761;InbreedingCoeff=0.7779;MQ=71.49;MQ0=0;MQRankSum=-1.220;QD=15.03;ReadPosRankSum=-0.544;VQSLOD=3.5822;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,120,1426	0/0:17,0:17:36.11:0,36,435	0/0:15,0:13:35.54:0,36,362	0/1:15,2:16:57.76:58,0,283	0/0:32,0:32:84.24:0,84,994	0/0:23,0:23:63.19:0,63,761	0/0:27,0:27:75.23:0,75,904	0/0:31,0:31:69.21:0,69,834	0/0:23,1:24:37.20:0,37,715	0/0:29,0:29:78.24:0,78,942	0/0:14,0:14:36.09:0,36,422	0/0:21,0:21:57.17:0,57,688	0/0:21,0:21:57.17:0,57,689	0/0:25,0:25:66.18:0,66,784	0/0:32,0:31:90.22:0,90,1033	0/0:26,0:26:69.20:0,69,821	0/0:19,1:20:28.20:0,28,622	0/0:17,0:17:42.07:0,42,477	0/0:15,0:15:39.10:0,39,451	0/0:37,0:37:99:0,105,1237	0/0:16,0:16:48.15:0,48,580	0/0:30,0:30:78.24:0,78,942	0/0:26,0:26:66.19:0,66,787	0/0:17,0:19:56.91:0,57,645	0/0:28,0:28:81.25:0,81,978	1/1:2,20:22:60.08:575,60,0	0/0:29,0:29:69.17:0,69,807	1/1:0,8:8:21.03:203,21,0
chr10	78073230	.	A	AC	2175.68	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.393;DP=533;FS=3.750;HRun=6;HaplotypeScore=75.7001;InbreedingCoeff=0.9690;MQ=86.33;MQ0=0;MQRankSum=-2.751;QD=31.53;ReadPosRankSum=1.649;VQSLOD=4.3169;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.15:0,87,872	0/0:8,0:8:24.05:0,24,245	0/0:15,0:15:7.48:0,7,331	0/0:19,0:20:49.54:0,50,468	0/0:21,0:21:60.14:0,60,612	0/0:25,0:25:72.13:0,72,721	0/0:24,0:24:66.13:0,66,666	0/0:31,0:31:69.13:0,69,690	0/0:12,0:12:33.07:0,33,337	0/0:8,0:8:24.04:0,24,240	0/0:16,0:16:47.93:0,48,467	0/0:15,0:15:45.10:0,45,459	0/0:19,0:19:49.35:0,49,516	0/0:12,0:12:30.06:0,30,306	0/0:8,0:8:21.05:0,21,214	0/0:18,0:18:54.11:0,54,544	0/0:33,0:33:90.20:0,90,918	1/1:0,25:25:69.22:868,69,0	0/0:11,0:11:30.07:0,30,305	0/0:17,0:17:51.12:0,51,520	0/0:26,0:26:69.14:0,69,694	0/0:16,0:16:42.09:0,42,428	0/0:22,0:22:60.12:0,60,605	0/0:14,0:14:39.09:0,39,398	0/0:21,0:21:60.13:0,60,611	1/1:2,30:32:59.63:1035,60,0	0/0:19,0:18:51.12:0,51,520	1/1:0,12:12:33.11:415,33,0
chr10	78073557	.	C	CG	10418.26	PASS	AB=0.882;AC=37;AF=0.661;AN=56;BaseQRankSum=-12.743;DP=527;FS=9.033;HRun=5;HaplotypeScore=54.1756;InbreedingCoeff=0.9160;MQ=82.39;MQ0=0;MQRankSum=-2.791;QD=29.18;ReadPosRankSum=2.277;VQSLOD=4.9171;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,99,1063	1/1:1,8:9:24.08:316,24,0	0/0:22,0:22:51.04:0,51,504	0/0:12,0:11:22.59:0,23,217	1/1:1,11:12:24.08:316,24,0	1/1:0,24:24:57.19:750,57,0	1/1:3,20:23:54.18:710,54,0	1/1:2,15:17:39.13:512,39,0	1/1:1,19:20:45.15:592,45,0	1/1:1,15:16:45.15:591,45,0	1/1:4,21:25:42.13:553,42,0	1/1:1,22:23:57.19:749,57,0	1/1:4,16:20:51.17:667,51,0	1/1:5,18:23:48.16:631,48,0	1/1:0,16:16:42.14:553,42,0	1/1:1,14:15:39.13:513,39,0	1/1:2,28:30:81.26:1066,81,0	0/0:14,0:14:39.10:0,39,419	0/0:15,0:15:39.09:0,39,419	0/0:15,0:15:33.08:0,33,354	0/0:27,0:27:81.20:0,81,869	1/1:6,9:15:21.07:276,21,0	1/1:4,16:20:33.10:434,33,0	1/1:1,20:21:57.19:750,57,0	1/1:1,12:13:30.10:395,30,0	0/1:13,2:15:45.26:45,0,257	0/0:21,0:21:48.11:0,48,510	0/0:5,0:5:15.04:0,15,161
chr10	78073846	.	TA	T	1679.70	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=2.902;DP=593;FS=12.040;HRun=1;HaplotypeScore=122.0358;InbreedingCoeff=0.6951;MQ=81.35;MQ0=0;MQRankSum=-3.931;QD=16.00;ReadPosRankSum=-7.621;VQSLOD=0.7623;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.12:0,69,979	0/0:5,0:5:13.85:0,14,80	0/0:22,0:22:53.17:0,53,744	0/0:18,1:17:32.29:0,32,584	0/0:23,0:23:38.33:0,38,251	0/0:25,0:25:17.98:0,18,245	0/1:14,0:14:16.84:17,0,94	0/0:26,0:26:41.93:0,42,223	0/0:17,0:17:20.18:0,20,176	0/0:18,0:18:11.40:0,11,152	0/0:22,0:22:4.69:0,5,186	0/1:14,0:14:14.84:15,0,126	0/0:23,0:23:33.17:0,33,224	0/0:17,0:17:41.91:0,42,187	0/0:29,0:29:51.56:0,52,298	0/0:19,0:19:24.65:0,25,181	0/0:39,0:39:58.65:0,59,423	0/0:30,0:30:28.30:0,28,299	1/1:0,16:26:72.74:607,73,0	1/1:3,7:10:26.94:227,27,0	1/1:3,5:8:24.02:224,24,0	0/0:22,0:22:37.91:0,38,236	0/0:24,0:24:41.82:0,42,262	0/0:16,0:16:4.53:0,5,134	0/0:28,0:28:24.34:0,24,238	0/0:28,0:28:62.83:0,63,296	1/1:12,20:33:90.23:757,90,0	0/0:11,0:11:19.32:0,19,108
chr10	78073848	.	TTC	T	1785.70	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.745;DP=583;FS=8.998;HRun=0;HaplotypeScore=132.6428;InbreedingCoeff=0.9396;MQ=80.91;MQ0=0;MQRankSum=-1.855;QD=23.50;ReadPosRankSum=-2.563;VQSLOD=3.6891;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.18:0,63,1056	0/0:6,0:6:18.06:0,18,312	0/0:21,0:21:48.78:0,49,707	0/0:19,0:17:24.71:0,25,622	0/0:23,0:23:63.91:0,64,1027	0/0:23,0:23:69.24:0,69,1227	0/0:13,0:13:39.13:0,39,685	0/0:27,0:27:75.01:0,75,1216	0/0:16,0:16:48.15:0,48,832	0/0:17,0:17:51.16:0,51,854	0/0:21,0:21:61.08:0,61,1033	0/0:13,0:13:39.12:0,39,672	0/0:23,0:23:65.99:0,66,1120	0/0:17,0:17:51.15:0,51,853	0/0:28,0:28:84.27:0,84,1479	0/0:18,0:18:54.17:0,54,940	0/0:38,0:38:99:0,111,1792	0/0:30,0:30:87.23:0,87,1410	1/1:13,13:26:69.02:679,69,0	1/1:5,6:11:25.48:242,25,0	1/1:3,4:7:21.05:232,21,0	0/0:23,0:23:63.21:0,63,1099	0/0:24,0:24:66.85:0,67,1040	0/0:15,0:15:45.15:0,45,768	0/0:27,0:27:78.04:0,78,1270	0/0:31,0:31:90:0,90,1553	1/1:12,20:32:87.13:792,87,0	0/0:11,0:11:1.73:0,2,456
chr10	78073849	.	TC	T	1560.23	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.371;DP=580;FS=8.000;HRun=1;HaplotypeScore=120.3182;InbreedingCoeff=0.9959;MQ=81.04;MQ0=0;MQRankSum=-2.079;QD=21.08;ReadPosRankSum=-2.319;VQSLOD=2.5602;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.18:0,63,856	0/0:6,0:6:18.05:0,18,239	0/0:21,0:21:48.67:0,49,574	0/0:19,0:17:32.41:0,32,536	0/0:23,0:23:63.82:0,64,827	0/0:23,0:23:69.22:0,69,967	0/0:13,0:13:39.12:0,39,539	0/0:26,0:26:75.18:0,75,982	0/0:16,0:16:48.14:0,48,666	0/0:17,0:17:51.16:0,51,695	0/0:21,0:21:61.06:0,61,816	0/0:13,0:13:39.12:0,39,538	0/0:22,0:22:66.19:0,66,903	0/0:17,0:17:51.14:0,51,690	0/0:28,0:28:84.27:0,84,1181	0/0:18,0:18:54.17:0,54,753	0/0:39,0:39:99:0,114,1474	0/0:30,0:30:87.15:0,87,1129	1/1:23,3:26:68.80:576,69,0	1/1:10,1:11:26.93:225,27,0	1/1:6,1:7:21.03:198,21,0	0/0:24,0:24:66.12:0,66,891	0/0:24,0:24:66.84:0,67,829	0/0:16,0:16:48.11:0,48,631	0/0:26,0:26:78.14:0,78,1030	0/0:30,0:30:89.99:0,90,1230	1/1:30,0:30:86.81:722,87,0	0/0:11,0:11:26.53:0,27,384
chr10	78074182	.	A	ATC	3638.33	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=2.312;DP=602;FS=0.995;HRun=0;HaplotypeScore=153.4378;InbreedingCoeff=0.7880;MQ=68.65;MQ0=4;MQRankSum=-1.996;QD=10.73;ReadPosRankSum=-1.226;VQSLOD=3.4628;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.04:0,63,689	0/0:5,0:5:8.97:0,9,71	0/0:34,0:22:50.79:0,51,494	0/0:30,0:23:50.59:0,51,520	0/1:18,0:17:0.22:0,0,0	1/1:32,0:32:5.98:47,6,0	1/1:21,0:20:39.03:506,39,0	1/1:30,0:30:71.18:714,71,0	1/1:7,30:37:9.56:141,10,0	0/0:17,0:17:20.91:0,21,177	0/0:14,0:14:29.83:0,30,227	0/0:21,0:21:14.56:0,15,186	0/0:25,0:25:9.51:0,10,272	0/0:11,0:11:17.96:0,18,142	0/0:15,0:15:13.69:0,14,99	1/1:2,25:27:21.30:356,21,0	1/1:21,0:22:11.98:120,12,0	1/1:7,1:22:5.92:81,6,0	1/1:16,0:17:2.97:271,3,0	1/1:5,0:23:8.85:57,9,0	1/1:10,0:10:2.94:18,3,0	0/0:27,0:27:27.01:0,27,205	0/0:13,0:13:8.69:0,9,47	0/0:29,0:29:7.47:0,7,85	1/1:25,0:25:54.11:702,54,0	1/1:6,18:24:50.91:575,51,0	1/1:19,0:18:0.47:1,0,0	1/1:4,7:11:3.01:49,3,0
chr10	78074187	.	T	TCACACACACACA	1120.53	PASS	AB=0.949;AC=17;AF=0.304;AN=56;BaseQRankSum=2.428;DP=592;FS=3.829;HRun=0;HaplotypeScore=222.5536;InbreedingCoeff=0.3810;MQ=65.10;MQ0=8;MQRankSum=-2.905;QD=5.69;ReadPosRankSum=0.959;VQSLOD=2.7014;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.10:0,66,1782	1/1:3,0:4:8.99:74,9,0	0/0:31,0:19:53.90:0,54,1148	0/0:29,0:22:56.88:0,57,1033	1/1:16,0:15:8.60:97,9,0	0/0:37,0:37:6.02:0,6,153	0/0:21,0:20:41.48:0,41,422	0/0:33,0:33:90.40:0,90,1119	0/0:38,0:38:19.93:0,20,330	0/1:7,7:16:0.03:406,0,0	1/1:13,0:13:19.20:150,19,0	0/1:22,0:22:20.27:20,0,291	0/1:24,0:24:34.07:34,0,396	1/1:11,0:11:8.78:74,9,0	1/1:14,0:14:11.93:118,12,0	0/0:28,0:28:24.80:0,25,443	0/1:21,0:21:4.39:4,0,105	0/0:22,0:21:11.96:0,12,229	0/1:15,0:15:99:255,0,137	0/0:19,0:19:5.85:0,6,39	0/0:11,0:10:3.01:0,3,34	0/1:27,0:27:2.25:2,0,274	0/1:14,0:14:52.60:59,0,53	0/0:29,0:28:14.56:0,15,177	0/0:26,0:26:51.71:0,52,728	0/0:25,0:23:66.16:0,66,1327	0/0:17,0:16:16.24:0,16,107	0/0:7,0:7:3.01:0,3,57
chr10	78074189	.	T	TCTCA	4905.86	PASS	AB=0.889;AC=34;AF=0.607;AN=56;BaseQRankSum=2.840;DP=665;FS=2.543;HRun=0;HaplotypeScore=188.1155;InbreedingCoeff=0.1642;MQ=60.68;MQ0=11;MQRankSum=-4.174;QD=8.92;ReadPosRankSum=1.025;VQSLOD=4.4476;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.04:0,66,954	0/0:5,0:5:8.97:0,9,71	0/0:30,0:18:50.89:0,51,622	0/0:28,0:21:50.49:0,50,576	1/1:21,0:19:2.89:24,3,0	0/1:7,31:39:6.36:17,0,6	1/1:22,0:21:38.83:656,39,0	1/1:38,0:38:99:1040,113,0	1/1:39,0:39:1.27:142,1,0	0/1:19,0:19:94.34:94,0,117	0/0:14,0:13:29.83:0,30,227	0/1:13,0:27:60.85:61,0,169	0/1:17,0:29:99:100,0,258	0/0:15,0:15:17.84:0,18,142	0/1:21,0:18:3.56:4,0,80	1/1:28,0:28:20.58:313,21,0	1/1:7,0:24:5.43:113,5,0	0/1:22,0:21:28.98:81,0,29	1/1:10,0:22:14.67:661,15,0	1/1:19,0:19:8.63:57,9,0	1/1:8,0:12:2.94:18,3,0	0/1:32,0:32:68.30:68,0,154	0/1:18,0:18:19.90:90,0,20	0/1:34,0:34:33.13:33,0,71	1/1:26,0:26:49.06:963,49,0	0/1:25,0:23:9.67:255,0,10	1/1:9,0:21:8.94:67,9,0	1/1:8,0:7:3.01:49,3,0
chr10	78074210	.	CAG	C	849.13	PASS	AB=0.994;AC=18;AF=0.360;AN=50;BaseQRankSum=-0.930;DP=645;FS=16.219;HRun=0;HaplotypeScore=165.0282;InbreedingCoeff=0.2281;MQ=48.41;MQ0=19;MQRankSum=1.429;QD=2.33;ReadPosRankSum=-3.484;VQSLOD=0.8320;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:25:81.31:81,0,121	0/1:3,0:3:0:0,0,0	./.	./.	./.	1/1:38,2:40:38.55:295,39,0	1/1:27,1:25:23.64:156,24,0	1/1:34,0:32:2.89:18,3,0	1/1:39,1:39:15.79:207,16,0	0/0:19,0:19:13.26:0,13,76	0/0:8,0:7:0:0,0,0	0/0:25,0:25:14.60:0,15,124	0/1:20,0:20:7.96:8,0,140	0/0:13,0:13:1.83:0,2,6	0/0:23,0:21:0.47:0,0,2	0/1:32,0:32:6.64:101,0,7	1/1:23,0:27:8.48:46,8,0	0/0:21,0:21:14.97:0,15,162	0/0:21,0:20:23.94:0,24,226	0/0:25,0:25:3.31:0,3,153	0/0:17,0:15:3:0,3,25	0/1:30,0:30:17.54:18,0,111	0/1:21,0:21:9.02:9,0,37	0/1:41,0:39:19.04:19,0,146	0/1:20,0:21:8.06:45,0,8	0/0:27,0:25:24.29:0,24,403	0/0:16,0:17:11.98:0,12,99	0/0:9,0:8:3:0,3,27
chr10	78074211	.	A	ACACACACAGT	1603.16	PASS	AB=1.000;AC=14;AF=0.269;AN=52;BaseQRankSum=4.096;DP=604;FS=16.562;HRun=0;HaplotypeScore=204.3203;InbreedingCoeff=-0.0866;MQ=49.30;MQ0=19;MQRankSum=-1.508;QD=6.19;ReadPosRankSum=0.622;VQSLOD=1.1613;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:69.23:0,69,1723	./.	0/0:16,0:9:9.08:0,9,435	0/0:9,0:4:12.04:0,12,278	1/1:19,0:16:3.01:48,3,0	0/0:39,0:39:44.33:0,44,456	0/1:32,0:27:99:141,0,168	0/0:31,0:29:0:0,0,403	0/0:40,0:39:47.28:0,47,457	0/1:12,0:12:80.29:158,0,80	./.	0/1:23,0:23:86.32:86,0,186	0/1:20,0:20:99:161,0,129	0/0:10,0:10:0.47:0,0,2	1/1:22,0:19:6:68,6,0	0/0:31,0:31:16.08:0,16,267	0/1:26,0:26:21.15:21,0,127	0/0:21,0:21:16.79:0,17,324	0/1:23,0:21:99:178,0,236	0/0:23,0:23:11.80:0,12,97	0/0:18,0:15:3.01:0,3,44	0/1:26,0:26:99:250,0,113	0/1:20,0:20:44.72:434,0,45	0/0:18,10:32:2.41:0,2,70	0/1:19,0:19:99:184,0,157	0/0:27,0:25:60.94:0,61,1190	0/1:17,0:17:1.52:17,0,2	0/0:9,0:8:2.98:0,3,35
chr10	78074255	.	A	AGAGAGT	2515.36	PASS	AB=0.883;AC=16;AF=0.286;AN=56;BaseQRankSum=-1.545;DP=809;FS=0.760;HRun=0;HaplotypeScore=205.2453;InbreedingCoeff=0.3845;MQ=58.80;MQ0=30;MQRankSum=-0.474;QD=8.09;ReadPosRankSum=-3.680;VQSLOD=1.9775;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:54.07:0,54,880	1/1:3,7:11:2.96:21,3,0	0/0:38,0:15:21.41:0,21,209	0/0:61,0:17:13.44:0,13,189	1/1:21,1:21:24.86:241,25,0	0/0:41,0:41:99:0,108,1396	0/0:33,0:30:72.03:0,72,860	0/0:40,0:40:99:0,104,923	0/0:37,0:36:90.06:0,90,1269	1/1:19,0:20:38.66:470,39,0	1/1:21,0:23:38.61:296,39,0	0/1:28,0:28:98.40:324,0,98	0/1:32,0:32:99:466,0,162	0/1:1,0:18:0.10:0,0,0	0/1:6,23:33:0:0,0,0	0/0:25,0:25:57.05:0,57,848	0/0:29,0:29:56.25:0,56,520	0/0:23,0:23:50.58:0,51,560	0/1:29,0:27:31.77:32,0,488	0/0:27,0:27:62.44:0,62,638	0/0:26,0:25:41.95:0,42,395	0/1:26,0:26:99:209,0,139	0/1:29,0:29:9.37:322,0,9	0/1:40,0:38:99:304,0,245	0/0:21,0:21:56.70:0,57,601	0/0:23,0:22:38.32:0,38,830	0/0:27,0:26:40.17:0,40,469	0/0:25,0:23:29.63:0,30,390
chr10	78074521	.	TGG	T	5250.47	PASS	AB=0.519;AC=13;AF=0.232;AN=56;BaseQRankSum=8.820;DP=585;FS=2.798;HRun=3;HaplotypeScore=83.2205;InbreedingCoeff=0.8982;MQ=77.70;MQ0=0;MQRankSum=0.546;QD=41.67;ReadPosRankSum=1.306;VQSLOD=4.3810;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.29:0,84,1609	0/0:9,0:9:24.08:0,24,464	0/0:20,0:20:48.10:0,48,778	0/0:9,0:8:14.79:0,15,228	0/0:23,0:23:54.19:0,54,1042	0/0:25,0:25:72.25:0,72,1391	0/0:23,0:23:69.24:0,69,1323	0/0:35,0:35:99:0,105,1999	0/0:26,0:26:78.27:0,78,1499	0/0:23,0:23:69.23:0,69,1282	0/0:10,0:10:30.10:0,30,560	0/0:21,0:21:63.17:0,63,1173	0/0:25,0:25:75.26:0,75,1439	0/0:15,0:15:45.15:0,45,869	0/0:29,0:29:87.30:0,87,1681	0/0:25,0:25:72.25:0,72,1391	0/0:32,0:32:96.30:0,96,1812	1/1:0,7:7:21.07:322,21,0	1/1:0,15:15:45.15:686,45,0	1/1:1,22:23:63.13:912,63,0	1/1:0,26:26:66.22:1011,66,0	0/0:19,0:19:51.17:0,51,985	0/0:17,0:17:48.16:0,48,927	0/0:21,0:21:63.22:0,63,1203	0/0:24,0:24:69.23:0,69,1288	0/1:1,13:14:15.79:555,0,16	1/1:0,21:21:60.16:893,60,0	1/1:1,19:20:57.19:873,57,0
chr10	78075311	.	AGTGTGTGTGTGTGTGTGTGTGTGT	A	5507.63	PASS	AB=1.000;AC=37;AF=0.841;AN=44;BaseQRankSum=6.282;DP=497;FS=7.385;HRun=0;HaplotypeScore=282.1713;InbreedingCoeff=0.3895;MQ=64.37;MQ0=15;MQRankSum=-4.126;QD=18.67;ReadPosRankSum=1.174;VQSLOD=1.9008;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:61.06:0,61,4561	1/1:10,1:11:3.01:188,3,0	0/0:31,0:18:3.01:0,3,61	0/0:35,0:19:5.93:0,6,119	1/1:12,3:15:0.89:2,1,0	1/1:15,0:15:6:97,6,0	./.	1/1:16,0:18:5.95:68,6,0	1/1:16,8:24:12.04:753,12,0	1/1:15,4:19:12.04:753,12,0	1/1:12,2:14:3.01:188,3,0	1/1:10,3:13:9.03:565,9,0	1/1:9,1:11:6.02:356,6,0	1/1:7,6:12:18.06:1130,18,0	1/1:12,2:14:9.03:406,9,0	1/1:11,3:13:3.01:189,3,0	1/1:22,0:22:2.97:20,3,0	./.	./.	1/1:9,0:13:3.01:69,3,0	./.	1/1:12,1:12:3.01:188,3,0	1/1:7,1:8:3.01:188,3,0	1/1:24,4:28:3.90:190,4,0	./.	./.	0/1:17,0:17:0:0,0,0	1/1:13,0:13:3.01:156,3,0
chr10	78075369	.	CACAT	C	1030.07	PASS	AB=0.762;AC=12;AF=0.214;AN=56;BaseQRankSum=6.416;DP=436;FS=15.863;HRun=0;HaplotypeScore=176.4623;InbreedingCoeff=0.7110;MQ=51.73;MQ0=11;MQRankSum=-6.570;QD=15.15;ReadPosRankSum=2.817;VQSLOD=2.4864;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:78.25:0,78,2121	0/0:7,0:6:9.03:0,9,219	0/0:5,0:1:3.01:0,3,87	0/0:20,0:6:7.89:0,8,86	0/0:14,0:14:12.04:0,12,256	0/0:12,0:12:18.06:0,18,486	0/0:19,0:18:23.65:0,24,634	0/0:27,0:26:75.26:0,75,2034	0/0:24,0:24:39.13:0,39,929	0/0:24,0:24:51.78:0,52,1521	0/0:11,0:11:14.61:0,15,343	0/0:15,0:13:21.07:0,21,467	0/0:12,0:12:24.08:0,24,577	0/0:18,0:17:27.09:0,27,526	0/0:13,0:13:24.08:0,24,486	0/0:13,0:13:30.10:0,30,801	0/0:21,0:21:41.69:0,42,1029	1/1:11,1:12:21.90:235,22,0	1/1:1,3:4:7.28:182,7,0	0/1:1,9:11:0:0,0,0	1/1:6,8:13:1.25:3,1,0	0/0:15,0:15:27.09:0,27,689	0/0:14,0:14:24.08:0,24,607	0/0:30,0:30:14.74:0,15,360	0/0:19,0:19:36.12:0,36,964	0/1:11,0:10:99:310,0,198	1/1:0,12:12:15.01:267,15,0	1/1:4,0:4:12.03:186,12,0
chr10	78075371	.	CAT	C	587.02	PASS	AB=0.824;AC=12;AF=0.214;AN=56;BaseQRankSum=6.602;DP=450;FS=19.656;HRun=0;HaplotypeScore=169.7745;InbreedingCoeff=0.7201;MQ=51.74;MQ0=11;MQRankSum=-7.565;QD=8.76;ReadPosRankSum=3.340;VQSLOD=1.6995;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:78.25:0,78,1438	0/0:8,0:7:11.90:0,12,168	0/0:5,0:1:3.01:0,3,60	0/0:20,0:6:10.77:0,11,65	0/0:14,0:14:11.92:0,12,175	0/0:13,0:13:18.06:0,18,340	0/0:20,0:19:26.50:0,27,472	0/0:28,0:27:78.26:0,78,1488	0/0:26,0:26:42.10:0,42,652	0/0:24,0:24:72.21:0,72,1024	0/0:11,0:11:14.76:0,15,231	0/0:16,0:14:21.07:0,21,319	0/0:13,0:13:26.91:0,27,391	0/0:19,0:19:29.96:0,30,370	0/0:15,0:15:27.06:0,27,336	0/0:14,0:14:30.10:0,30,553	0/0:22,0:22:44.72:0,45,726	1/1:1,11:12:21.44:175,21,0	1/1:4,0:4:7.28:73,7,0	0/1:10,0:10:0:0,0,0	1/1:14,0:13:1.25:3,1,0	0/0:15,0:15:26.97:0,27,484	0/0:15,0:15:27.07:0,27,437	0/0:30,0:30:14.28:0,14,250	0/0:20,0:20:39.03:0,39,705	0/1:5,6:10:99:242,0,120	1/1:12,0:12:13.53:102,14,0	1/1:0,4:4:11.63:146,12,0
chr10	78075377	.	CATACAT	C	1336.05	PASS	AB=0.917;AC=11;AF=0.204;AN=54;BaseQRankSum=6.880;DP=474;FS=10.984;HRun=0;HaplotypeScore=197.2342;InbreedingCoeff=0.7777;MQ=54.78;MQ0=6;MQRankSum=-8.096;QD=25.69;ReadPosRankSum=4.095;VQSLOD=2.5725;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:78.27:0,78,2762	0/0:8,0:8:14.88:0,15,521	0/0:6,0:2:6.02:0,6,221	0/0:23,0:9:14.98:0,15,158	0/0:17,0:17:18.53:0,19,594	0/0:13,0:13:18.06:0,18,678	0/0:22,0:22:35.65:0,36,1267	0/0:31,0:30:93.28:0,93,3190	0/0:26,0:26:41.98:0,42,1565	0/0:25,0:25:72.24:0,72,2572	0/0:13,0:13:21.04:0,21,692	0/0:16,0:16:21.07:0,21,740	0/0:14,0:14:26.92:0,27,996	0/0:20,0:19:29.72:0,30,1033	0/0:19,0:19:27.09:0,27,947	0/0:14,0:14:33.11:0,33,1225	0/0:22,0:22:47.99:0,48,1775	1/1:0,12:12:27.07:407,27,0	1/1:3,0:3:9.03:152,9,0	./.	1/1:10,0:9:1.25:3,1,0	0/0:17,0:17:29.93:0,30,1075	0/0:17,0:17:33.11:0,33,1149	0/0:32,0:32:20.58:0,21,630	0/0:25,0:25:50.97:0,51,1826	0/1:10,1:10:99:435,0,307	1/1:12,0:12:15.05:241,15,0	1/1:3,1:4:12.04:255,12,0
chr10	78075378	.	ATACATGCACAAG	A	2789.94	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=7.144;DP=476;FS=16.602;HRun=0;HaplotypeScore=231.8298;InbreedingCoeff=0.7731;MQ=54.89;MQ0=4;MQRankSum=-7.051;QD=45.00;ReadPosRankSum=3.850;VQSLOD=2.0552;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.31:0,90,4732	0/0:8,0:8:21.02:0,21,876	0/0:6,0:2:6.02:0,6,296	0/0:22,0:9:16.55:0,17,291	0/0:17,0:17:33.58:0,34,1236	0/0:14,0:14:42.14:0,42,1464	0/0:22,0:22:44.66:0,45,2157	0/0:30,0:29:90.31:0,90,5142	0/0:27,0:27:69.23:0,69,2925	0/0:24,0:24:72.25:0,72,4114	0/0:13,0:13:35.90:0,36,1320	0/0:16,0:16:45.15:0,45,1510	0/0:14,0:14:36.07:0,36,1774	0/0:19,0:19:44.60:0,45,1716	0/0:20,0:20:60.20:0,60,1885	0/0:15,0:15:45.15:0,45,2133	0/0:22,0:22:51.65:0,52,2952	1/1:12,0:12:30.06:891,30,0	1/1:0,3:3:9.03:354,9,0	1/1:0,10:10:1.82:5,2,0	1/1:1,9:9:1.25:3,1,0	0/0:17,0:17:45.10:0,45,1956	0/0:17,0:17:48.16:0,48,2117	0/0:32,0:32:27.18:0,27,1134	0/0:26,0:26:62.72:0,63,3269	0/1:11,0:10:99:692,0,497	1/1:0,12:12:18.06:611,18,0	1/1:4,0:4:12.04:396,12,0
chr10	78075386	.	ACAAG	A	1315.13	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=7.928;DP=517;FS=24.604;HRun=0;HaplotypeScore=198.3396;InbreedingCoeff=0.8161;MQ=59.78;MQ0=2;MQRankSum=-6.725;QD=23.48;ReadPosRankSum=2.981;VQSLOD=1.8870;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:93.32:0,93,2346	0/0:9,0:9:21.07:0,21,461	0/0:13,0:10:30.10:0,30,672	0/0:24,0:15:23.47:0,23,324	0/0:18,0:18:39.13:0,39,850	0/0:17,0:17:51.17:0,51,956	0/0:23,0:23:48.50:0,49,1181	0/0:35,0:34:99:0,99,2635	0/0:27,0:27:69.67:0,70,1483	0/0:29,0:29:78.04:0,78,1983	0/0:17,0:17:44.81:0,45,1004	0/0:16,0:16:42.10:0,42,829	0/0:17,0:17:45.15:0,45,1083	0/0:19,0:19:39.05:0,39,766	0/0:21,0:21:57.19:0,57,1025	0/0:16,0:16:48.12:0,48,1031	0/0:23,0:23:60.03:0,60,1564	1/1:2,12:14:32.95:433,33,0	1/1:3,0:3:9.03:137,9,0	./.	1/1:9,0:9:1.25:3,1,0	0/0:17,0:17:42.14:0,42,958	0/0:17,0:17:45.15:0,45,1071	0/0:32,0:32:30.09:0,30,698	0/0:25,0:25:65.99:0,66,1662	0/1:13,0:13:99:385,0,149	1/1:12,0:12:18.06:286,18,0	1/1:5,0:5:15.05:230,15,0
chr10	78075388	.	AAG	A	1019.18	PASS	AB=0.560;AC=11;AF=0.204;AN=54;BaseQRankSum=7.783;DP=518;FS=26.659;HRun=0;HaplotypeScore=183.2043;InbreedingCoeff=0.8136;MQ=60.37;MQ0=1;MQRankSum=-4.853;QD=17.27;ReadPosRankSum=2.476;VQSLOD=1.9439;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.33:0,96,1869	0/0:10,0:10:24.05:0,24,404	0/0:13,0:10:30.10:0,30,531	0/0:22,0:16:14.53:0,15,292	0/0:18,0:18:42.10:0,42,704	0/0:17,0:17:51.17:0,51,775	0/0:22,0:22:48.56:0,49,906	0/0:33,0:32:99:0,99,2005	0/0:28,0:28:72.68:0,73,1221	0/0:27,0:27:78.08:0,78,1513	0/0:17,0:17:44.95:0,45,777	0/0:16,0:16:42.09:0,42,616	0/0:17,0:17:45.12:0,45,815	0/0:19,0:19:39.02:0,39,586	0/0:21,0:21:57.19:0,57,877	0/0:16,0:16:48.12:0,48,818	0/0:24,0:24:63.01:0,63,1201	1/1:14,0:14:33:328,33,0	1/1:3,0:3:9.02:93,9,0	./.	1/1:11,0:11:1.25:3,1,0	0/0:18,0:18:45.11:0,45,783	0/0:17,0:17:45.15:0,45,786	0/0:32,0:32:29.61:0,30,523	0/0:25,0:25:65.95:0,66,1244	0/1:3,11:14:99:384,0,124	1/1:12,0:12:18.04:186,18,0	1/1:1,4:5:14.63:184,15,0
chr10	78075674	.	TGC	T	523.43	PASS	AB=0.928;AC=11;AF=0.196;AN=56;BaseQRankSum=3.722;DP=580;FS=22.588;HRun=0;HaplotypeScore=162.2582;InbreedingCoeff=0.6247;MQ=54.10;MQ0=9;MQRankSum=-3.753;QD=4.80;ReadPosRankSum=1.016;VQSLOD=1.6304;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:39:0,39,602	0/0:13,0:12:14.43:0,14,190	0/0:31,0:10:20.28:0,20,151	0/0:36,0:12:11.96:0,12,147	0/0:24,0:24:17.35:0,17,402	0/0:20,0:19:29.93:0,30,373	0/0:20,0:19:23.67:0,24,237	0/0:24,0:23:62.23:0,62,429	0/0:26,0:26:30.23:0,30,524	0/0:24,0:24:59.66:0,60,564	0/0:15,0:15:15.05:0,15,190	0/0:20,0:20:29.76:0,30,354	0/0:22,0:21:39.90:0,40,477	0/0:21,0:21:38.62:0,39,416	0/0:16,0:16:18.06:0,18,245	0/0:24,0:22:33.02:0,33,400	0/0:16,0:16:26.98:0,27,326	0/1:14,0:12:2.63:3,0,93	1/1:14,0:14:38.75:287,39,0	1/1:22,0:21:14.95:121,15,0	1/1:9,0:8:2.48:17,2,0	0/0:22,0:22:33.07:0,33,390	0/0:21,0:21:40.81:0,41,482	0/0:20,0:20:22.99:0,23,372	0/0:27,0:28:50.65:0,51,674	0/1:13,5:18:11.95:12,0,80	1/1:16,0:16:20.95:170,21,0	0/1:16,0:16:42.90:71,0,43
chr10	78075675	.	GCGCACACACACACA	G	1987.07	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=3.556;DP=578;FS=20.152;HRun=0;HaplotypeScore=240.7288;InbreedingCoeff=0.7908;MQ=53.39;MQ0=9;MQRankSum=-4.563;QD=26.49;ReadPosRankSum=0.153;VQSLOD=1.2980;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:43.09:0,43,2477	0/0:13,0:12:13.99:0,14,886	0/0:31,0:10:20.60:0,21,403	0/0:35,0:11:12.38:0,12,438	0/0:24,0:24:44.55:0,45,2488	0/0:20,0:19:30.82:0,31,1766	0/0:20,0:19:24.08:0,24,1192	0/0:23,0:22:65.76:0,66,1197	0/0:26,0:26:47.90:0,48,2743	0/0:23,0:23:60.44:0,60,2193	0/0:15,0:15:15.02:0,15,970	0/0:20,0:20:33.11:0,33,1898	0/0:23,0:22:45.15:0,45,2486	0/0:20,0:20:38.92:0,39,2046	0/0:16,0:16:24.55:0,25,1381	0/0:25,0:23:33.06:0,33,1932	0/0:16,0:16:30:0,30,1599	0/0:14,0:12:33.11:0,33,1738	1/1:0,13:13:38.79:601,39,0	1/1:3,17:20:15.01:622,15,0	1/1:9,0:8:2.94:18,3,0	0/0:22,0:22:32.85:0,33,2094	0/0:22,0:22:42.54:0,43,2448	0/0:20,0:20:37.95:0,38,2346	0/0:28,0:28:51.18:0,51,3272	0/0:19,0:19:13.20:0,13,2069	1/1:1,14:16:21.07:881,21,0	0/1:16,0:16:19.35:19,0,1459
chr10	78075677	.	G	GCA	5684.16	PASS	AB=0.747;AC=27;AF=0.519;AN=52;BaseQRankSum=-4.979;DP=613;FS=0.587;HRun=0;HaplotypeScore=166.9866;InbreedingCoeff=-0.0877;MQ=49.96;MQ0=14;MQRankSum=2.115;QD=12.63;ReadPosRankSum=-2.143;VQSLOD=4.2905;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:25.34:0,25,257	0/1:4,10:13:12.75:124,0,13	./.	./.	0/1:18,4:25:50.15:288,0,50	0/1:8,11:19:6.09:316,0,6	1/1:12,8:18:15.05:225,15,0	1/1:25,0:24:5.96:45,6,0	0/1:19,7:27:71.41:364,0,71	0/1:18,5:25:43.73:153,0,44	1/1:6,9:16:15.05:226,15,0	0/1:11,2:22:0.66:246,0,1	0/1:10,3:22:30.13:261,0,30	0/1:10,10:20:6.08:325,0,6	0/1:3,12:15:12.13:225,0,12	0/1:14,10:23:3.20:346,0,3	0/1:11,8:20:9.10:264,0,9	0/1:16,0:14:51.69:217,0,52	0/0:13,0:13:8.52:0,9,42	0/0:20,0:19:13.71:0,14,65	0/0:9,0:8:0.47:0,0,1	1/1:7,4:24:33.01:383,33,0	1/1:7,2:25:38.72:351,39,0	1/1:7,1:24:20.88:275,21,0	0/1:13,15:29:81.95:480,0,82	0/1:19,0:19:0.70:304,0,1	0/0:15,0:15:19.89:0,20,98	0/1:16,0:16:11.09:266,0,11
chr10	78075715	.	C	CT	137.13	PASS	AB=0.842;AC=5;AF=0.089;AN=56;BaseQRankSum=3.721;DP=627;FS=2.878;HRun=0;HaplotypeScore=134.2792;InbreedingCoeff=-0.0969;MQ=59.25;MQ0=11;MQRankSum=-0.907;QD=1.61;ReadPosRankSum=-0.322;VQSLOD=2.8149;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:77.40:0,77,863	0/0:12,0:11:20.65:0,21,223	0/0:35,0:14:42.09:0,42,523	0/0:33,0:12:30.06:0,30,382	0/0:26,0:26:72.17:0,72,865	0/0:19,0:18:42.02:0,42,451	0/0:22,0:20:47.64:0,48,442	0/0:29,0:29:84.18:0,84,1130	0/0:27,0:27:74.32:0,74,754	0/0:22,0:22:62.67:0,63,795	0/0:22,0:22:48.01:0,48,576	0/0:18,0:18:45.27:0,45,445	0/0:25,0:24:63.10:0,63,748	0/0:18,0:18:44.77:0,45,425	0/0:18,0:18:39.01:0,39,438	0/0:18,0:17:46.14:0,46,435	0/0:19,0:19:44.90:0,45,487	0/1:10,5:14:49.51:50,0,97	0/1:12,0:10:17.04:17,0,58	0/0:23,0:22:24.35:0,24,96	0/0:12,0:12:5.43:0,5,26	0/0:22,0:22:53.15:0,53,530	0/0:32,0:32:76.75:0,77,851	0/0:25,0:25:57.08:0,57,589	0/0:30,0:30:72.04:0,72,799	0/1:15,6:21:82.29:82,0,145	0/1:24,0:24:5.40:5,0,145	0/1:7,6:13:37.97:95,0,38
chr10	78076989	.	C	CCTA	27236.06	PASS	AB=0.926;AC=37;AF=0.661;AN=56;BaseQRankSum=-3.028;DP=832;FS=3.076;HRun=0;HaplotypeScore=154.6185;InbreedingCoeff=0.9199;MQ=78.71;MQ0=0;MQRankSum=-5.331;QD=50.62;ReadPosRankSum=4.140;VQSLOD=6.9114;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,159,2518	1/1:1,8:9:24.08:536,24,0	0/0:23,0:23:66.19:0,66,1041	0/0:34,0:34:81.20:0,81,1285	1/1:4,30:34:57.20:1273,57,0	1/1:4,22:26:63.22:1406,63,0	1/1:3,22:25:54.19:1193,54,0	1/1:6,26:35:90.25:1834,90,0	1/1:4,36:40:99:2454,111,0	1/1:3,38:42:99:2568,117,0	1/1:1,14:16:30.10:668,30,0	1/1:6,31:38:90.31:1976,90,0	1/1:3,28:34:90.31:1984,90,0	1/1:4,30:35:87.30:1886,87,0	1/1:4,35:39:99:2198,99,0	1/1:5,27:32:75.26:1675,75,0	1/1:4,17:22:51.18:1129,51,0	0/0:27,0:27:78.24:0,78,1240	0/0:28,0:28:81.27:0,81,1298	0/0:18,0:18:51.17:0,51,833	0/0:62,0:62:99:0,169,2734	1/1:2,25:28:72.25:1582,72,0	1/1:2,11:14:33.11:736,33,0	1/1:2,26:29:60.21:1340,60,0	1/1:2,12:15:33.11:737,33,0	0/1:23,2:25:61.82:62,0,983	0/0:27,0:27:75.23:0,75,1173	0/0:22,0:22:66.23:0,66,1077
chr10	78077311	.	A	AAATT	1779.88	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=-6.004;DP=384;FS=3.853;HRun=0;HaplotypeScore=58.8275;InbreedingCoeff=0.8014;MQ=66.78;MQ0=0;MQRankSum=-0.025;QD=27.81;ReadPosRankSum=0.310;VQSLOD=3.0487;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:60.19:0,60,955	0/0:8,0:8:15.02:0,15,218	./.	0/1:5,0:4:0:0,0,0	0/0:23,0:23:36.11:0,36,562	0/0:19,0:19:51.17:0,51,828	0/0:6,0:6:9.03:0,9,139	0/0:34,0:34:57.17:0,57,865	0/0:10,0:10:9.03:0,9,147	0/0:18,0:18:45.12:0,45,700	0/0:11,0:11:18.06:0,18,293	0/0:11,0:11:12.04:0,12,195	0/0:10,0:10:18.06:0,18,289	0/0:10,0:10:15.02:0,15,176	0/0:14,0:14:18.05:0,18,265	0/0:8,0:8:12.04:0,12,196	0/0:24,0:23:48.15:0,48,753	0/0:22,0:22:57.19:0,57,925	1/1:11,10:22:36.09:793,36,0	1/1:8,8:16:21.07:511,21,0	1/1:6,2:8:6.02:146,6,0	0/0:5,0:5:3.01:0,3,47	0/0:9,0:9:12:0,12,167	0/0:5,0:5:5.98:0,6,62	0/0:12,0:12:30.09:0,30,467	0/0:11,0:11:24.08:0,24,392	1/1:7,6:13:21.07:479,21,0	0/0:18,0:18:29.22:0,29,488
chr10	78078660	.	T	TA	10130.42	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-7.370;DP=389;FS=11.277;HRun=7;HaplotypeScore=32.7051;InbreedingCoeff=0.8370;MQ=73.95;MQ0=0;MQRankSum=-2.449;QD=28.94;ReadPosRankSum=2.168;VQSLOD=4.3740;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.05:0,60,567	1/1:0,3:3:9.03:109,9,0	0/0:8,0:8:4.52:0,5,111	0/0:7,0:7:8.53:0,9,78	1/1:0,11:11:32.99:364,33,0	1/1:2,19:21:54.17:652,54,0	1/1:1,16:17:42.13:507,42,0	1/1:5,27:32:81.22:954,81,0	1/1:0,13:13:30.09:362,30,0	1/1:2,16:18:51.13:589,51,0	1/1:0,11:11:30.09:362,30,0	1/1:2,17:19:48.15:580,48,0	1/1:1,7:8:18.06:217,18,0	1/1:0,9:9:18.06:217,18,0	1/1:0,22:22:45.01:544,45,0	1/1:1,9:10:24.07:290,24,0	1/1:2,20:23:45.14:543,45,0	1/1:3,12:15:30.09:361,30,0	1/1:2,19:21:57.17:688,57,0	1/1:0,3:3:9.03:109,9,0	1/1:0,5:5:9.03:109,9,0	1/1:0,6:6:17.97:198,18,0	1/1:0,3:3:9.03:109,9,0	1/1:2,15:17:45.10:527,45,0	1/1:1,10:11:27.08:326,27,0	1/1:0,15:15:45.14:544,45,0	1/1:2,18:20:48.15:580,48,0	1/1:9,8:17:24.07:290,24,0
chr10	78079125	.	TATGA	T	8113.64	PASS	AB=0.952;AC=43;AF=0.768;AN=56;BaseQRankSum=10.648;DP=478;FS=0.000;HRun=0;HaplotypeScore=80.3880;InbreedingCoeff=0.8225;MQ=66.08;MQ0=6;MQRankSum=0.730;QD=21.81;ReadPosRankSum=1.313;VQSLOD=4.1124;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,1:24:8.14:0,8,1067	1/1:0,12:11:21.07:316,21,0	0/0:16,0:9:8.99:0,9,120	0/0:13,0:9:9.02:0,9,164	1/1:5,8:13:21.07:343,21,0	1/1:2,17:19:39.13:636,39,0	1/1:6,13:19:18.06:294,18,0	1/1:13,17:30:51.12:725,51,0	1/1:5,9:14:18.06:294,18,0	1/1:5,16:20:44.96:649,45,0	1/1:4,5:9:15.05:245,15,0	1/1:13,10:23:24.08:392,24,0	1/1:8,8:15:24.08:392,24,0	1/1:4,15:19:27.09:441,27,0	1/1:6,13:19:27.09:440,27,0	1/1:3,10:13:27.09:441,27,0	1/1:6,20:26:39.13:636,39,0	1/1:3,11:13:18.06:294,18,0	0/1:19,1:20:21.90:22,0,512	0/0:11,0:11:21.06:0,21,439	0/0:24,0:24:60.18:0,60,1247	1/1:6,7:13:6.02:98,6,0	1/1:5,8:13:15.05:245,15,0	1/1:4,12:16:30.10:489,30,0	1/1:2,12:14:21.07:343,21,0	1/1:2,0:18:14.96:288,15,0	0/0:18,0:17:36.11:0,36,804	1/1:5,0:11:13.43:91,13,0
chr10	78080372	.	CCTCTCTCTCTCTCTCT	C	1773.39	PASS	AB=1.000;AC=15;AF=0.288;AN=52;BaseQRankSum=1.266;DP=556;FS=0.946;HRun=0;HaplotypeScore=194.7142;InbreedingCoeff=0.3790;MQ=63.96;MQ0=26;MQRankSum=-0.861;QD=10.19;ReadPosRankSum=0.229;VQSLOD=1.9725;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:42.48:0,42,1525	0/0:9,0:9:6.02:0,6,165	./.	./.	0/0:21,0:20:15.03:0,15,234	1/1:15,8:22:8.52:268,9,0	0/1:30,0:29:11.50:222,0,11	0/1:17,0:17:9.61:10,0,19	1/1:14,0:12:6.02:166,6,0	0/0:21,0:20:24.08:0,24,554	0/0:20,0:19:8.65:0,9,333	1/1:8,0:8:3.87:25,4,0	0/1:14,0:14:30.13:128,0,30	0/0:19,0:18:18.53:0,19,446	0/0:22,0:20:15.52:0,16,395	1/1:12,17:28:13.59:563,14,0	1/1:14,0:13:21.06:434,21,0	0/1:10,0:10:11.50:16,0,11	0/0:15,0:14:8.74:0,9,61	0/0:13,0:20:9.07:0,9,88	0/0:25,0:24:8.99:0,9,74	0/0:12,0:12:4.30:0,4,49	0/0:12,0:11:7.82:0,8,33	0/0:11,0:11:0.72:0,1,90	0/1:15,0:14:5.52:104,0,6	0/0:14,0:17:23.54:0,24,303	0/0:20,0:30:7.95:0,8,47	0/0:22,0:15:15.02:0,15,263
chr10	78080405	.	C	CTG	167.93	PASS	AB=0.957;AC=7;AF=0.135;AN=52;BaseQRankSum=3.054;DP=572;FS=43.428;HRun=0;HaplotypeScore=122.6317;InbreedingCoeff=-0.1676;MQ=48.63;MQ0=42;MQRankSum=0.257;QD=1.18;ReadPosRankSum=1.864;VQSLOD=0.4189;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:34:31.09:0,31,448	0/0:6,0:6:12:0,12,118	./.	./.	0/0:31,0:30:20.75:0,21,143	0/1:22,0:20:2.79:3,0,209	0/1:27,0:25:81.74:82,0,121	0/0:22,0:18:47.10:0,47,347	0/1:10,5:13:31.47:31,0,103	0/0:25,0:23:68.70:0,69,586	0/0:17,0:15:10.89:0,11,183	0/0:18,0:18:8.60:0,9,190	0/1:19,1:17:32.85:33,0,162	0/0:16,0:15:31.28:0,31,263	0/0:25,0:22:14.97:0,15,141	0/0:29,0:28:34.96:0,35,236	0/1:22,0:20:99:101,0,137	0/0:15,0:15:6.18:0,6,60	0/0:17,0:14:37:0,37,299	0/0:20,0:19:23.92:0,24,193	0/0:23,0:19:17.98:0,18,150	0/1:21,0:20:11.05:11,0,54	0/0:20,0:17:2.32:0,2,192	0/1:15,0:14:27.97:28,0,162	0/0:21,0:20:23.87:0,24,290	0/0:18,0:15:41.03:0,41,319	0/0:31,0:30:47.29:0,47,338	0/0:14,0:10:29.97:0,30,278
chr10	78080417	.	CTCTCTG	C	1454.40	PASS	AB=0.962;AC=20;AF=0.357;AN=56;BaseQRankSum=0.048;DP=587;FS=7.580;HRun=0;HaplotypeScore=145.1099;InbreedingCoeff=-0.0285;MQ=56.82;MQ0=38;MQRankSum=1.291;QD=4.52;ReadPosRankSum=2.624;VQSLOD=1.6318;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:32:57.38:0,57,776	0/1:5,0:5:15.93:16,0,76	0/0:13,0:6:14.09:0,14,101	0/1:21,0:7:6.59:7,0,9	0/1:5,27:31:10.07:27,0,10	0/1:25,0:23:5.54:6,0,245	0/0:23,0:21:35.12:0,35,249	0/0:28,0:24:65.22:0,65,500	0/0:14,0:12:26.54:0,27,197	0/1:25,0:23:99:219,0,225	0/1:19,0:18:23.71:195,0,24	1/1:18,0:18:17.57:226,18,0	0/1:20,0:17:16.36:204,0,16	0/1:16,0:15:29.16:207,0,29	0/0:20,0:18:2.59:0,3,18	0/1:34,0:33:48.79:49,0,260	0/0:21,0:19:36.11:0,36,256	1/1:16,0:16:1.24:3,1,0	0/1:17,0:15:40.14:40,0,197	0/0:22,0:21:26.15:0,26,216	0/0:19,0:15:14.97:0,15,122	1/1:22,0:21:0.47:1,0,0	1/1:22,0:19:8.81:225,9,0	0/1:13,0:12:18.04:105,0,18	0/0:21,0:20:7.16:0,7,274	0/1:17,0:14:86.34:86,0,180	0/0:34,0:32:24.31:0,24,327	0/0:15,0:11:14.40:0,14,227
chr10	78080421	.	CTG	C	1939.50	PASS	AB=0.837;AC=21;AF=0.375;AN=56;BaseQRankSum=-2.018;DP=598;FS=0.978;HRun=0;HaplotypeScore=120.0522;InbreedingCoeff=0.7208;MQ=57.92;MQ0=35;MQRankSum=2.773;QD=8.36;ReadPosRankSum=0.010;VQSLOD=3.2303;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:21.32:0,21,536	0/1:5,0:5:15.21:41,0,15	0/0:17,0:7:17.27:0,17,134	0/1:25,0:9:4.26:4,0,21	1/1:30,1:30:6.36:37,6,0	0/0:26,0:24:3.81:0,4,274	0/0:21,0:19:26.07:0,26,178	0/0:29,0:25:68.15:0,68,525	0/0:14,0:12:3.62:0,4,185	1/1:25,0:23:29.29:430,29,0	1/1:18,0:17:32.44:272,32,0	1/1:19,0:19:26.99:258,27,0	1/1:20,0:17:29.85:251,30,0	1/1:17,0:16:35.14:316,35,0	0/0:5,14:18:1.14:0,1,3	0/0:35,0:34:46.52:0,47,346	0/0:20,0:19:13.51:0,14,209	1/1:0,14:14:2.99:23,3,0	0/0:21,0:17:11.31:0,11,236	0/0:23,0:22:29.51:0,30,242	0/0:18,0:15:14.97:0,15,122	0/1:1,22:22:0:0,0,0	1/1:24,0:22:44.93:370,45,0	1/1:10,1:10:17.15:133,17,0	0/0:22,0:21:21.75:0,22,317	0/0:18,0:15:16.08:0,16,218	0/0:36,0:34:46.69:0,47,393	0/0:13,0:11:23.46:0,23,203
chr10	78081732	.	TCACACACA	T	868.16	PASS	AB=0.964;AC=32;AF=0.842;AN=38;BaseQRankSum=0.325;DP=481;FS=5.869;HRun=0;HaplotypeScore=120.0653;InbreedingCoeff=0.1119;MQ=70.94;MQ0=13;MQRankSum=-0.651;QD=2.91;ReadPosRankSum=1.757;VQSLOD=1.4329;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:26:30.17:30,0,53	1/1:7,1:8:3.01:73,3,0	./.	./.	./.	./.	1/1:18,0:18:2.74:33,3,0	0/0:17,0:17:1.82:0,2,5	1/1:8,2:10:6.02:147,6,0	./.	./.	1/1:17,0:17:3.44:21,3,0	1/1:15,0:19:6.02:108,6,0	1/1:15,0:14:9.02:114,9,0	1/1:15,3:18:3.01:73,3,0	1/1:15,1:16:3.01:73,3,0	1/1:16,2:18:2.74:73,3,0	0/1:10,0:11:1.96:50,0,2	1/1:14,0:19:0.47:1,0,0	./.	./.	1/1:10,0:12:2.99:56,3,0	0/1:14,0:14:0:0,0,0	1/1:31,0:32:6.02:91,6,0	./.	1/1:18,0:18:2.22:7,2,0	0/1:17,0:17:0:0,0,0	1/1:7,0:7:1.55:4,2,0
chr10	78082116	.	A	AAG	4249.28	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-11.823;DP=775;FS=1.919;HRun=0;HaplotypeScore=102.2424;InbreedingCoeff=0.9918;MQ=77.86;MQ0=3;MQRankSum=-1.120;QD=38.63;ReadPosRankSum=1.241;VQSLOD=6.8222;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,105,1317	0/0:9,0:9:21.06:0,21,255	0/0:33,0:32:63.91:0,64,729	0/0:41,0:36:69.92:0,70,766	0/0:33,0:33:81.25:0,81,1016	0/0:29,0:29:78.24:0,78,980	0/0:20,0:20:51.15:0,51,636	0/0:39,0:39:81.18:0,81,958	0/0:33,0:33:81.25:0,81,1019	0/0:19,0:18:48.15:0,48,610	0/0:24,0:24:63.20:0,63,799	0/0:25,0:25:57.17:0,57,713	0/0:26,0:26:75.24:0,75,955	0/0:20,0:20:54.17:0,54,687	0/0:42,0:42:99:0,108,1351	0/0:32,0:32:84.27:0,84,1067	0/0:29,0:29:75.14:0,75,890	0/0:29,0:29:66.19:0,66,820	1/1:4,16:20:12.97:765,13,0	1/1:4,25:29:69.23:1125,69,0	1/1:4,25:29:69.24:1155,69,0	0/0:31,0:31:87.25:0,87,1071	0/0:18,0:18:51.16:0,51,649	0/0:25,0:25:63.17:0,63,774	0/0:23,0:23:66.16:0,66,808	0/0:27,0:27:77.50:0,77,573	1/1:0,29:31:72.25:1205,72,0	0/0:15,0:15:39.40:0,39,319
chr10	78082317	.	TA	T	2035.20	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.364;DP=619;FS=0.435;HRun=9;HaplotypeScore=57.1441;InbreedingCoeff=0.9958;MQ=73.94;MQ0=0;MQRankSum=-1.443;QD=20.77;ReadPosRankSum=0.453;VQSLOD=4.0557;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:69.20:0,69,796	0/0:8,0:8:21.06:0,21,242	0/0:17,0:17:44.57:0,45,459	0/0:11,0:10:17.99:0,18,180	0/0:27,0:27:72.21:0,72,831	0/0:27,0:27:66.20:0,66,762	0/0:21,0:21:63.18:0,63,717	0/0:41,0:41:99:0,99,1127	0/0:20,0:20:51.10:0,51,564	0/0:26,0:26:69.21:0,69,796	0/0:23,0:23:60.18:0,60,692	0/0:20,0:20:54.16:0,54,623	0/0:20,0:20:54.16:0,54,623	0/0:21,0:21:57.17:0,57,658	0/0:21,1:22:26.67:0,27,542	0/0:20,0:20:57.17:0,57,658	0/0:11,0:11:33.10:0,33,380	0/0:13,0:13:33.08:0,33,370	1/1:2,23:25:69.04:631,69,0	1/1:4,21:25:60.03:549,60,0	1/1:4,15:19:42.02:384,42,0	0/0:29,0:29:66.20:0,66,762	0/0:27,0:27:72.18:0,72,802	0/0:15,0:15:39.12:0,39,450	0/0:18,1:19:26.69:0,27,554	0/0:41,0:41:99:0,114,1314	1/1:1,28:29:69.04:631,69,0	0/0:13,0:13:39.12:0,39,450
chr10	78082560	.	TAAGGGAGCGGC	T	4388.62	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.590;DP=731;FS=1.919;HRun=0;HaplotypeScore=229.5398;InbreedingCoeff=0.9969;MQ=87.96;MQ0=0;MQRankSum=-9.006;QD=51.63;ReadPosRankSum=0.802;VQSLOD=4.7253;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,5957	0/0:11,0:11:33.11:0,33,1676	0/0:24,0:24:66.23:0,66,3039	0/0:32,0:32:90.27:0,90,4224	0/0:20,0:20:57.20:0,57,2990	0/0:19,0:19:57.20:0,57,3138	0/0:35,0:35:99:0,102,5128	0/0:30,0:30:75.25:0,75,3852	0/0:27,0:27:78.27:0,78,4251	0/0:29,0:29:75.22:0,75,4052	0/0:19,0:19:57.18:0,57,2978	0/0:21,0:21:54.19:0,54,2851	0/0:35,0:35:90.29:0,90,4763	0/0:37,0:36:99:0,105,5465	0/0:36,0:36:99:0,102,5329	0/0:21,0:21:60.21:0,60,3156	0/0:36,0:36:99:0,99,5034	0/0:25,0:25:66.23:0,66,3323	1/1:5,13:18:36.11:1006,36,0	1/1:5,14:19:30.10:1034,30,0	1/1:6,13:19:18.06:592,18,0	0/0:35,0:35:90.31:0,90,4686	0/0:21,0:21:60.21:0,60,3364	0/0:29,0:29:87.26:0,87,4405	0/0:21,0:21:57.20:0,57,3096	0/0:37,0:36:99:0,102,5149	1/1:7,22:29:51.65:1757,52,0	0/0:8,0:8:24.08:0,24,1234
chr10	78082781	.	TTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	T	3885.95	PASS	AB=0.900;AC=17;AF=0.327;AN=52;BaseQRankSum=2.779;DP=592;FS=37.621;HRun=0;HaplotypeScore=431.5388;InbreedingCoeff=0.7498;MQ=61.73;MQ0=13;MQRankSum=0.336;QD=25.07;ReadPosRankSum=2.873;VQSLOD=0.8032;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:23.37:0,23,1098	1/1:3,0:3:6.02:99,6,0	0/0:41,0:18:18.05:0,18,659	0/0:35,0:16:21.07:0,21,849	1/1:19,0:20:15.05:353,15,0	0/0:11,0:14:6.02:0,6,147	0/0:22,0:23:24.08:0,24,623	0/0:30,0:30:30.57:0,31,965	0/1:16,0:18:99:118,0,205	1/1:25,0:25:12.55:1326,13,0	./.	1/1:22,0:22:18.04:813,18,0	1/1:14,1:16:9.03:691,9,0	1/1:20,1:21:12.04:291,12,0	1/1:16,1:17:6.02:148,6,0	0/0:20,0:21:24.07:0,24,671	0/0:25,0:24:36.12:0,36,1532	0/0:11,0:11:5.98:0,6,67	0/0:26,0:25:39.08:0,39,1991	0/0:22,0:22:30.04:0,30,545	0/0:29,0:27:24.08:0,24,1370	1/1:9,3:11:3.01:48,3,0	./.	0/0:22,6:29:0:0,0,0	0/0:10,0:12:8.95:0,9,141	0/0:34,0:34:75.25:0,75,5926	0/0:12,0:12:18.06:0,18,1971	0/0:14,0:14:27.09:0,27,1566
chr10	78082799	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTG	C	4053.67	PASS	AB=1.000;AC=17;AF=0.327;AN=52;BaseQRankSum=2.717;DP=466;FS=37.920;HRun=0;HaplotypeScore=329.8987;InbreedingCoeff=0.7543;MQ=40.85;MQ0=35;MQRankSum=0.442;QD=35.25;ReadPosRankSum=0.988;VQSLOD=1.4070;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:38:29.92:0,30,1693	1/1:2,0:2:6.02:99,6,0	0/0:26,0:7:18.05:0,18,659	0/0:24,0:7:21.07:0,21,849	1/1:14,0:13:15.05:353,15,0	0/0:11,0:10:6.02:0,6,147	0/0:17,0:17:24.08:0,24,623	0/0:15,0:13:30.57:0,31,965	0/1:11,0:10:99:100,0,205	1/1:3,16:18:16.68:1531,17,0	./.	1/1:14,0:15:18.04:813,18,0	1/1:13,0:14:9.03:672,9,0	1/1:11,3:14:12.04:291,12,0	1/1:11,3:13:6.02:148,6,0	0/0:21,0:20:24.07:0,24,671	0/0:20,0:18:36.12:0,36,1544	0/0:7,0:5:5.98:0,6,67	0/0:17,0:16:42.09:0,42,2205	0/0:20,0:20:30.04:0,30,546	0/0:21,0:18:24.08:0,24,1348	1/1:11,0:10:3.01:48,3,0	./.	0/0:25,0:24:0:0,0,0	0/0:10,0:8:8.95:0,9,141	0/0:31,0:29:78.26:0,78,6071	0/0:11,0:11:30.10:0,30,2678	0/0:15,0:13:33.11:0,33,1826
chr10	78082811	.	CTCTCTCTCTCTCTCTCTCTCTCTGTGTG	C	2860.18	PASS	AB=0.992;AC=22;AF=0.550;AN=40;BaseQRankSum=5.584;DP=349;FS=15.646;HRun=0;HaplotypeScore=181.8746;InbreedingCoeff=0.1787;MQ=33.45;MQ0=41;MQRankSum=0.053;QD=13.30;ReadPosRankSum=-1.308;VQSLOD=1.6957;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:34:26.68:0,27,987	./.	0/0:10,0:3:8.94:0,9,103	0/0:10,0:3:6.02:0,6,106	./.	0/1:19,1:19:5.50:76,0,5	1/1:23,0:23:9.31:347,9,0	1/1:15,0:10:0.26:96,0,0	1/1:13,0:12:8.30:393,8,0	1/1:19,0:17:18.02:884,18,0	./.	1/1:3,0:2:6.02:300,6,0	1/1:3,0:3:9.03:398,9,0	./.	./.	0/0:9,9:17:0.94:0,1,2	0/1:28,0:26:99:180,0,310	0/1:8,0:6:13.06:38,0,13	0/0:8,0:7:15.05:0,15,915	1/1:11,0:11:4.66:19,5,0	0/0:16,0:13:9.02:0,9,471	./.	./.	./.	1/1:18,0:14:3.01:61,3,0	0/1:28,0:26:99:110,0,3160	0/1:12,0:12:21.77:22,0,1433	0/1:14,0:12:76.85:77,0,617
chr10	78082833	.	CTGTGTGTGTG	C	3026.44	PASS	AB=0.818;AC=26;AF=0.565;AN=46;BaseQRankSum=4.537;DP=493;FS=1.795;HRun=0;HaplotypeScore=172.7831;InbreedingCoeff=0.3085;MQ=32.73;MQ0=38;MQRankSum=-1.049;QD=10.73;ReadPosRankSum=-0.382;VQSLOD=2.5089;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:31:36.12:0,36,1302	0/1:6,0:7:10.05:90,0,10	./.	./.	1/1:14,0:13:0.47:1,0,0	1/1:12,0:17:6.01:58,6,0	0/1:15,0:24:11.74:12,0,12	0/0:23,0:19:20.25:0,20,143	1/1:13,0:14:20.31:165,20,0	0/1:23,0:22:8.28:118,0,8	./.	1/1:9,11:20:15.02:326,15,0	1/1:9,5:15:22.12:387,22,0	0/0:18,0:18:0:0,0,1	0/0:25,0:24:3.36:0,3,19	0/1:12,0:16:0.47:0,0,1	1/1:24,0:25:7.41:226,7,0	1/1:9,3:10:15.01:319,15,0	0/0:12,0:7:5.93:0,6,41	1/1:9,0:9:5.05:47,5,0	./.	./.	0/0:14,2:17:0:0,0,0	0/0:19,8:26:0:0,0,1	1/1:19,0:18:8.97:72,9,0	0/1:9,16:23:31.88:937,0,32	0/1:17,0:14:5.01:150,0,5	1/1:6,8:12:9.03:256,9,0
chr10	78082837	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTA	G	751.63	PASS	AC=6;AF=0.125;AN=48;BaseQRankSum=0.846;DP=489;FS=1.885;HRun=0;HaplotypeScore=265.9337;InbreedingCoeff=0.5648;MQ=33.30;MQ0=35;MQRankSum=-2.649;QD=21.48;ReadPosRankSum=-1.715;VQSLOD=2.3717;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:32:39.13:0,39,4651	0/0:10,0:9:11.59:0,12,478	./.	./.	1/1:14,0:13:0.89:2,1,0	0/0:18,0:17:5.45:0,5,369	0/0:26,0:26:13.34:0,13,553	0/0:24,0:20:45.15:0,45,1320	0/0:15,0:14:23.81:0,24,1107	0/0:23,0:22:36.56:0,37,1112	./.	0/0:21,0:20:23.86:0,24,533	0/0:15,0:15:24.75:0,25,428	0/0:19,0:19:3.48:0,3,148	0/0:27,0:25:7.14:0,7,184	0/0:16,0:16:0.23:0,0,0	0/0:26,0:25:32.58:0,33,1575	0/0:12,0:10:15.05:0,15,438	0/0:11,0:6:3:0,3,26	1/1:2,2:4:4.83:207,5,0	./.	0/0:20,0:19:0:0,0,0	0/0:17,0:17:0.47:0,0,1	0/0:28,0:26:1.41:0,1,3	0/0:23,0:19:9.03:0,9,585	0/0:22,0:20:45.15:0,45,2377	1/1:9,8:14:8.92:642,9,0	0/0:12,0:10:9.03:0,9,404
chr10	78082857	.	GTGTGTGTGTA	G	3969.35	PASS	AB=0.971;AC=42;AF=0.875;AN=48;BaseQRankSum=5.256;DP=587;FS=3.939;HRun=0;HaplotypeScore=196.4490;InbreedingCoeff=0.1967;MQ=39.38;MQ0=35;MQRankSum=-2.755;QD=8.00;ReadPosRankSum=0.849;VQSLOD=2.5520;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:31:35.91:0,36,1625	1/1:13,0:12:8.58:152,9,0	1/1:7,0:1:2.04:6,2,0	./.	1/1:17,1:17:0.47:1,0,0	1/1:22,0:21:6.02:106,6,0	1/1:42,0:42:10.64:122,11,0	0/1:26,0:24:32.06:112,0,32	1/1:18,0:18:20.90:287,21,0	1/1:24,0:23:30.14:317,30,0	./.	1/1:25,0:24:22.39:326,22,0	1/1:23,0:23:20.96:383,21,0	1/1:24,0:24:2.50:16,3,0	1/1:28,0:27:1.79:17,2,0	1/1:18,0:18:4.66:22,5,0	1/1:31,0:30:30.24:437,30,0	1/1:13,0:12:11.81:277,12,0	./.	1/1:3,0:3:5.05:49,5,0	./.	1/1:35,0:34:8.76:86,9,0	0/1:21,0:21:0:0,0,0	1/1:30,0:28:2.06:11,2,0	1/1:23,1:20:9.03:146,9,0	0/1:25,0:23:93.97:699,0,94	1/1:11,0:8:9.02:167,9,0	0/1:13,2:13:30.10:230,0,30
chr10	78082859	.	GTGTGTGTA	G	3968.22	PASS	AB=1.000;AC=41;AF=0.854;AN=48;BaseQRankSum=6.457;DP=593;FS=2.612;HRun=0;HaplotypeScore=190.6554;InbreedingCoeff=0.1727;MQ=39.93;MQ0=34;MQRankSum=-3.713;QD=7.92;ReadPosRankSum=0.901;VQSLOD=2.4363;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:32:38.88:0,39,1346	1/1:13,0:12:11.48:169,11,0	1/1:8,0:1:2.04:6,2,0	./.	1/1:18,0:17:0.47:1,0,0	1/1:22,0:21:5.99:146,6,0	1/1:42,0:42:15.41:160,15,0	0/1:27,0:26:15.08:145,0,15	1/1:18,0:18:20.90:398,21,0	1/1:23,0:23:32.38:376,32,0	./.	1/1:26,0:25:22.43:273,22,0	1/1:23,0:23:20.40:301,20,0	1/1:25,0:25:2.61:16,3,0	1/1:29,0:28:1.86:17,2,0	1/1:18,0:18:4.85:21,5,0	1/1:29,0:29:30.36:608,30,0	1/1:14,0:13:17.71:238,18,0	./.	1/1:2,0:2:4.82:34,5,0	./.	1/1:36,0:35:8.51:45,9,0	0/1:21,0:21:0.15:0,0,0	1/1:30,0:28:2.05:11,2,0	0/1:24,0:20:2.75:206,0,3	0/1:26,0:24:99:485,0,123	1/1:11,0:8:8.96:132,9,0	0/1:15,0:13:30.10:180,0,30
chr10	78082867	.	ATG	A	2140.14	PASS	AB=0.795;AC=40;AF=0.741;AN=54;BaseQRankSum=1.616;DP=650;FS=4.571;HRun=0;HaplotypeScore=180.5611;InbreedingCoeff=0.3440;MQ=43.20;MQ0=31;MQRankSum=-2.265;QD=3.86;ReadPosRankSum=0.445;VQSLOD=2.8150;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:37:36.69:37,0,822	1/1:2,0:14:6.76:30,7,0	0/0:16,0:2:5.91:0,6,52	0/0:39,0:4:2.98:0,3,22	0/1:4,0:20:0:0,0,0	1/1:8,11:19:5.82:71,6,0	1/1:14,29:46:14.37:116,14,0	1/1:24,0:23:36.10:417,36,0	1/1:4,12:16:15.05:178,15,0	1/1:23,0:26:4.16:70,4,0	./.	1/1:7,23:29:14.80:170,15,0	1/1:5,15:22:14.66:124,15,0	1/1:7,0:29:0.78:2,1,0	0/1:10,0:29:0.17:0,0,0	1/1:17,5:22:22.61:221,23,0	1/1:7,23:30:26.66:307,27,0	1/1:6,7:12:15.04:171,15,0	0/0:7,0:7:2.97:0,3,20	1/1:14,0:14:0.94:3,1,0	0/0:13,0:10:2.99:0,3,24	1/1:9,26:35:9.03:108,9,0	0/1:12,8:20:0:0,0,0	1/1:19,11:28:5.62:60,6,0	1/1:12,10:18:9.03:107,9,0	0/1:26,0:25:25.39:25,0,441	1/1:10,0:8:6.57:29,7,0	0/1:13,1:13:29.65:30,0,89
chr10	78083379	.	T	TC	2090.36	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-2.296;DP=521;FS=4.465;HRun=7;HaplotypeScore=67.6165;InbreedingCoeff=0.9555;MQ=83.69;MQ0=0;MQRankSum=-0.149;QD=22.48;ReadPosRankSum=0.170;VQSLOD=3.5438;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,123,1180	0/0:8,0:8:18.02:0,18,174	0/0:18,0:18:20.34:0,20,313	0/0:18,0:18:31.55:0,32,253	0/0:18,0:18:51.08:0,51,491	0/0:24,0:24:72.12:0,72,694	0/0:20,0:20:57.07:0,57,543	0/0:16,0:16:32.97:0,33,305	0/0:20,0:20:48.01:0,48,447	0/0:16,0:16:45.06:0,45,430	0/0:20,0:20:48.01:0,48,445	1/1:2,11:13:39.07:445,39,0	1/1:3,4:12:23.80:235,24,0	0/0:8,0:8:24.04:0,24,232	0/0:24,0:24:66.08:0,66,632	0/0:18,0:18:51.08:0,51,493	0/0:33,0:33:93.06:0,93,876	0/0:24,0:25:59.02:0,59,537	0/0:14,0:14:33.04:0,33,314	0/0:16,0:16:24.02:0,24,231	0/0:20,0:20:48.07:0,48,463	1/1:2,16:18:36.11:435,36,0	1/1:0,14:14:33.09:397,33,0	1/1:0,23:25:62.93:718,63,0	0/0:19,0:19:45.05:0,45,429	1/1:5,0:8:8.39:40,8,0	0/0:25,0:25:66.09:0,66,636	1/1:3,0:3:3.47:10,3,0
chr10	78086760	.	G	GGGCCTA	6786.36	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-1.845;DP=582;FS=24.034;HRun=0;HaplotypeScore=134.6194;InbreedingCoeff=0.9973;MQ=89.49;MQ0=0;MQRankSum=-12.829;QD=73.76;ReadPosRankSum=-0.239;VQSLOD=3.6440;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,2293	0/0:6,0:6:18.06:0,18,414	0/0:32,0:31:69.91:0,70,1440	0/0:23,0:23:43.27:0,43,976	0/0:40,0:40:99:0,117,2650	0/0:18,0:18:48.16:0,48,1088	0/0:25,0:25:72.23:0,72,1597	0/0:35,0:35:93.32:0,93,2084	0/0:10,0:10:30.10:0,30,671	0/0:17,0:17:48.16:0,48,1080	0/0:18,0:18:48.16:0,48,1051	1/1:7,10:17:35.91:1188,36,0	1/1:6,20:28:69.24:2343,69,0	0/0:21,0:21:60.21:0,60,1305	0/0:20,0:20:54.17:0,54,1202	0/0:22,0:22:66.20:0,66,1432	0/0:26,0:26:69.24:0,69,1577	0/0:15,0:15:42.14:0,42,929	0/0:16,0:16:45.11:0,45,916	0/0:18,0:18:54.19:0,54,1230	0/0:26,0:26:75.26:0,75,1730	1/1:0,12:12:36.12:1247,36,0	1/1:4,10:15:24.08:803,24,0	1/1:5,14:20:35.95:1205,36,0	0/0:12,0:12:33.09:0,33,695	0/0:26,0:26:66.21:0,66,1464	0/0:17,0:17:48.16:0,48,1093	0/0:12,0:12:36.12:0,36,802
chr10	78086951	.	A	ATT	2243.83	PASS	AB=0.560;AC=11;AF=0.196;AN=56;BaseQRankSum=-9.161;DP=543;FS=8.072;HRun=10;HaplotypeScore=100.4485;InbreedingCoeff=0.8553;MQ=80.70;MQ0=1;MQRankSum=-1.297;QD=26.09;ReadPosRankSum=0.301;VQSLOD=3.0804;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:38:98.69:0,99,1041	0/0:5,0:5:12.02:0,12,122	0/0:26,0:20:11.51:0,12,270	0/0:22,0:19:24.32:0,24,178	0/0:21,0:21:51.08:0,51,518	0/0:26,0:26:66.11:0,66,671	0/0:15,0:16:32.78:0,33,380	0/0:16,0:16:36.02:0,36,359	0/0:20,0:20:48.08:0,48,482	0/0:23,0:23:60.10:0,60,606	0/0:24,0:24:48.04:0,48,488	1/1:1,10:13:29.58:395,30,0	1/1:2,7:9:18.06:260,18,0	0/0:19,0:19:45.05:0,45,450	0/0:22,0:22:57.10:0,57,580	0/0:14,0:14:38.92:0,39,380	0/0:24,0:24:51.29:0,51,561	0/1:3,2:14:28.15:129,0,28	0/0:21,0:22:13.68:0,14,499	0/0:26,0:27:62.85:0,63,693	0/0:24,0:24:63.10:0,63,640	1/1:0,12:13:35.52:450,36,0	1/1:1,14:17:38.36:532,38,0	1/1:1,17:19:45.15:656,45,0	0/0:10,0:10:24.05:0,24,244	0/0:31,0:31:42.58:0,43,639	0/0:22,0:22:57.08:0,57,572	0/0:5,0:5:8.98:0,9,84
chr10	78087407	.	CTT	C	8747.80	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=6.153;DP=392;FS=7.493;HRun=11;HaplotypeScore=66.1485;InbreedingCoeff=0.8583;MQ=63.38;MQ0=4;MQRankSum=-2.580;QD=25.73;ReadPosRankSum=2.080;VQSLOD=4.6082;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:30:78.19:0,78,1071	1/1:1,2:4:9.91:98,10,0	0/0:5,0:5:8.95:0,9,69	0/0:4,0:3:6.01:0,6,70	1/1:2,14:16:36.07:382,36,0	1/1:2,13:15:33.08:351,33,0	1/1:1,8:9:21.05:223,21,0	1/1:6,24:29:67.84:712,68,0	1/1:0,3:3:9.02:96,9,0	1/1:4,9:13:27.05:287,27,0	1/1:1,18:18:48.12:511,48,0	1/1:1,12:13:36.07:383,36,0	1/1:1,8:9:21.05:222,21,0	1/1:1,12:13:30.07:317,30,0	1/1:3,16:18:45.10:477,45,0	1/1:0,11:11:27.07:287,27,0	1/1:3,23:26:28.40:577,28,0	0/0:12,0:13:32.56:0,33,506	1/1:6,13:16:36.06:382,36,0	1/1:1,22:23:60.12:637,60,0	1/1:0,8:8:21.05:224,21,0	1/1:2,1:3:3:30,3,0	1/1:0,10:10:30.07:318,30,0	1/1:0,3:3:9.02:96,9,0	1/1:0,30:30:87.22:924,87,0	1/1:2,19:20:54.13:575,54,0	1/1:1,14:15:42.10:447,42,0	1/1:2,6:8:18.04:192,18,0
chr10	78087561	.	C	CG	4054.82	PASS	AC=36;AF=0.667;AN=54;BaseQRankSum=12.414;DP=278;FS=22.657;HRun=0;HaplotypeScore=83.6893;InbreedingCoeff=0.8864;MQ=42.70;MQ0=11;MQRankSum=-12.193;QD=34.36;ReadPosRankSum=0.485;VQSLOD=2.0484;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.26:0,84,1156	1/1:0,2:2:6.02:83,6,0	0/0:10,0:3:5.98:0,6,62	0/0:29,0:8:17.04:0,17,193	1/1:0,8:8:18.06:258,18,0	1/1:0,3:3:9.03:114,9,0	1/1:1,3:4:8.99:101,9,0	1/1:1,12:7:20.94:273,21,0	1/1:0,3:3:9.03:124,9,0	1/1:0,5:4:12.04:154,12,0	1/1:0,7:6:12.04:177,12,0	0/0:14,0:14:42.10:0,42,536	0/0:16,0:16:48.16:0,48,671	1/1:0,8:8:21.07:297,21,0	1/1:0,6:6:18.06:254,18,0	1/1:0,5:5:15.05:205,15,0	1/1:1,7:8:15.05:211,15,0	0/0:23,0:22:66.22:0,66,922	1/1:1,14:14:42.14:558,42,0	1/1:0,6:6:15.05:210,15,0	./.	0/0:9,0:9:18.06:0,18,252	0/0:11,0:11:27.07:0,27,360	0/0:17,0:17:51.17:0,51,701	1/1:0,11:11:33.11:456,33,0	1/1:0,8:8:24.08:331,24,0	1/1:0,5:5:15.05:208,15,0	1/1:0,1:1:3.01:42,3,0
chr10	78087595	.	TG	T	8779.44	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=14.455;DP=419;FS=1.302;HRun=1;HaplotypeScore=128.0812;InbreedingCoeff=0.9436;MQ=55.40;MQ0=6;MQRankSum=-13.125;QD=35.54;ReadPosRankSum=-0.990;VQSLOD=4.2962;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1611	1/1:0,5:5:15.05:208,15,0	0/0:19,0:13:27.51:0,28,505	0/0:27,0:16:44.95:0,45,640	1/1:0,19:19:48.16:670,48,0	1/1:0,7:5:15.05:209,15,0	1/1:1,7:8:21.07:293,21,0	1/1:0,13:12:33.11:461,33,0	1/1:0,6:5:15.05:209,15,0	1/1:0,12:12:36.12:503,36,0	1/1:0,19:18:45.15:628,45,0	0/0:18,0:18:54.18:0,54,863	0/0:18,0:18:51.17:0,51,815	1/1:0,21:20:54.18:747,54,0	1/1:0,17:16:39.13:538,39,0	1/1:0,10:9:27.09:377,27,0	1/1:0,8:8:24.08:335,24,0	0/0:25,0:24:72.24:0,72,1136	1/1:0,19:18:51.17:712,51,0	1/1:0,25:25:48.16:670,48,0	1/1:0,1:1:3.01:42,3,0	0/0:6,0:6:12.04:0,12,192	0/0:12,0:12:33.11:0,33,527	0/0:11,0:11:33.11:0,33,528	1/1:0,19:19:51.17:712,51,0	1/1:0,20:20:60.20:838,60,0	1/1:0,16:15:39.13:544,39,0	1/1:0,2:2:6.02:82,6,0
chr10	78087612	.	C	CT	3746.79	PASS	AB=0.636;AC=21;AF=0.375;AN=56;BaseQRankSum=5.095;DP=466;FS=13.027;HRun=4;HaplotypeScore=155.2154;InbreedingCoeff=0.8929;MQ=56.80;MQ0=4;MQRankSum=-8.871;QD=22.85;ReadPosRankSum=-2.459;VQSLOD=1.4594;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1210	0/0:5,0:5:11.82:0,12,81	0/0:14,0:12:30:0,30,315	0/0:22,0:16:39.04:0,39,444	0/0:20,0:20:43.99:0,44,284	1/1:1,6:5:12.04:150,12,0	1/1:1,9:9:21.07:262,21,0	0/1:6,8:11:1.49:185,0,1	1/1:2,7:8:15.05:187,15,0	0/0:16,0:16:36.07:0,36,192	0/0:23,0:23:32.54:0,33,286	0/0:20,0:20:50.92:0,51,251	0/0:20,0:20:22.79:0,23,213	0/0:23,0:22:54.54:0,55,354	0/0:19,0:18:41.26:0,41,278	1/1:2,10:11:27.08:337,27,0	1/1:4,11:15:29:371,29,0	0/0:21,0:20:60.18:0,60,715	1/1:12,7:19:3.77:244,4,0	1/1:5,20:27:58.43:796,58,0	1/1:1,1:2:5.98:57,6,0	0/0:7,0:7:8.72:0,9,59	0/0:12,0:12:25.98:0,26,141	0/0:12,0:12:34.53:0,35,180	1/1:8,18:26:43.43:538,43,0	0/0:22,0:22:50.27:0,50,292	1/1:4,19:20:51.60:620,52,0	0/0:10,0:7:14.48:0,14,80
chr10	78087614	.	T	TA	1147.57	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=5.675;DP=469;FS=10.931;HRun=0;HaplotypeScore=164.4487;InbreedingCoeff=0.2815;MQ=56.83;MQ0=4;MQRankSum=-8.483;QD=6.95;ReadPosRankSum=1.487;VQSLOD=2.8129;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1422	0/0:5,0:5:12.04:0,12,154	0/0:13,0:11:29.98:0,30,372	0/0:22,0:16:41.55:0,42,523	0/0:19,1:20:51.06:0,51,622	1/1:7,0:5:11.62:69,12,0	1/1:10,0:9:3.54:102,4,0	0/1:12,0:9:21.48:61,0,21	0/1:10,0:9:30.89:59,0,31	0/0:16,1:17:45.06:0,45,530	0/0:24,0:24:66.02:0,66,768	0/0:20,0:20:60.18:0,60,752	0/0:20,0:20:55.38:0,55,663	0/0:23,0:22:57.15:0,57,719	0/0:19,0:18:48.08:0,48,583	0/1:12,0:11:9.98:115,0,10	0/1:15,0:15:41.62:106,0,42	0/0:22,0:21:60.20:0,60,839	0/1:19,0:19:68.67:69,0,124	0/1:28,0:28:11.34:274,0,11	1/1:2,0:2:2.51:10,3,0	0/0:6,1:7:9.03:0,9,119	0/0:11,1:12:27.09:0,27,346	0/0:12,0:12:36.12:0,36,465	0/1:27,0:27:71.30:168,0,71	0/0:22,0:22:63.02:0,63,723	1/1:23,0:20:32.61:281,33,0	0/0:8,2:7:18.02:0,18,215
chr10	78089807	.	AG	A	17231.96	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=6.424;DP=675;FS=15.856;HRun=4;HaplotypeScore=71.1264;InbreedingCoeff=0.9452;MQ=90.17;MQ0=0;MQRankSum=-7.820;QD=30.55;ReadPosRankSum=5.978;VQSLOD=3.2926;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.23:0,78,1055	1/1:0,15:15:42.09:488,42,0	0/0:28,0:28:75.22:0,75,978	0/0:24,0:24:61.06:0,61,679	1/1:1,38:39:99:1243,108,0	1/1:0,19:19:51.16:612,51,0	1/1:0,20:20:54.17:648,54,0	1/1:2,31:33:90.22:1034,90,0	1/1:1,31:32:90.28:1079,90,0	1/1:4,30:34:84.26:1003,84,0	1/1:2,12:14:33.03:378,33,0	1/1:0,18:18:48.15:576,48,0	1/1:1,24:25:69.21:827,69,0	1/1:1,20:21:54.16:648,54,0	1/1:2,22:24:60.18:720,60,0	1/1:1,20:21:48.15:576,48,0	1/1:3,39:42:99:1295,108,0	1/1:2,10:12:30.09:360,30,0	1/1:2,18:20:54.14:617,54,0	1/1:0,27:27:78.13:901,78,0	1/1:2,21:23:57.17:684,57,0	1/1:2,30:32:81.21:959,81,0	1/1:1,24:25:60.18:715,60,0	1/1:0,26:26:63.19:756,63,0	1/1:1,19:20:42.13:504,42,0	0/0:24,2:26:3.23:0,3,860	1/1:0,22:22:51.16:611,51,0	0/0:3,0:3:9.03:0,9,126
chr10	78089953	.	T	TC	13694.76	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=17.834;DP=623;FS=4.848;HRun=2;HaplotypeScore=83.2641;InbreedingCoeff=0.9991;MQ=91.04;MQ0=0;MQRankSum=-3.743;QD=42.40;ReadPosRankSum=2.403;VQSLOD=4.6818;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1588	1/1:0,7:7:21.07:316,21,0	0/0:24,0:24:66.16:0,66,878	0/0:27,0:27:71.58:0,72,929	1/1:0,21:22:66.21:965,66,0	1/1:0,11:11:33.11:491,33,0	1/1:0,18:18:51.17:762,51,0	1/1:0,23:23:69.16:969,69,0	1/1:1,34:35:96.32:1438,96,0	1/1:0,20:20:60.20:896,60,0	1/1:0,13:13:36.12:533,36,0	0/0:19,0:19:57.19:0,57,797	0/0:17,0:17:51.17:0,51,712	1/1:0,26:26:72.24:1078,72,0	1/1:0,24:24:66.22:983,66,0	1/1:1,18:19:54.18:810,54,0	1/1:0,39:39:99:1571,105,0	1/1:0,17:17:51.17:767,51,0	0/0:25,0:25:75.22:0,75,1007	0/0:17,0:17:48.16:0,48,671	0/0:24,0:24:72.24:0,72,1003	0/0:31,0:31:93.30:0,93,1284	0/0:25,0:25:72.24:0,72,1006	0/0:31,0:31:93.31:0,93,1301	1/1:0,16:16:45.15:674,45,0	1/1:0,25:25:75.23:1090,75,0	0/0:22,0:22:66.22:0,66,919	1/1:0,8:8:24.08:353,24,0
chr10	78091860	.	T	TG	13632.37	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-12.744;DP=587;FS=7.271;HRun=1;HaplotypeScore=53.4784;InbreedingCoeff=0.9947;MQ=93.71;MQ0=0;MQRankSum=-3.832;QD=40.94;ReadPosRankSum=4.824;VQSLOD=4.9701;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1363	1/1:0,9:9:27.09:405,27,0	0/0:29,0:29:84.27:0,84,1082	0/0:22,0:22:66.17:0,66,807	1/1:0,9:9:24.08:360,24,0	0/0:25,0:25:75.23:0,75,960	0/0:23,0:23:63.20:0,63,817	0/0:28,0:28:81.25:0,81,1039	0/0:24,0:24:72.21:0,72,919	1/1:1,19:20:60.17:875,60,0	1/1:0,17:17:42.14:629,42,0	1/1:1,14:15:39.13:584,39,0	1/1:1,21:22:63.21:944,63,0	1/1:0,11:11:33.11:495,33,0	1/1:0,28:27:81.27:1214,81,0	0/0:28,0:27:81.26:0,81,1052	0/0:26,0:26:75.21:0,75,940	1/1:1,9:10:27.09:404,27,0	1/1:2,17:19:51.17:763,51,0	1/1:1,18:19:51.17:764,51,0	1/1:0,32:32:96.33:1439,96,0	1/1:1,14:15:42.14:629,42,0	1/1:0,12:12:33.11:494,33,0	1/1:1,24:25:66.22:989,66,0	0/0:14,0:14:39.13:0,39,506	1/1:0,26:26:72.15:979,72,0	1/1:2,37:39:99:1484,99,0	1/1:0,5:5:12.04:180,12,0
chr10	78092069	.	GTTA	G	8708.07	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.756;DP=750;FS=3.716;HRun=0;HaplotypeScore=157.3834;InbreedingCoeff=0.9994;MQ=71.91;MQ0=0;MQRankSum=-8.896;QD=45.35;ReadPosRankSum=2.746;VQSLOD=6.6940;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.27:0,78,1838	1/1:1,11:12:27.09:475,27,0	0/0:32,0:32:96.33:0,96,2181	0/0:20,0:20:52.01:0,52,1291	1/1:1,30:31:69.22:1208,69,0	0/0:28,0:28:84.29:0,84,1955	0/0:24,0:24:69.24:0,69,1627	0/0:24,0:24:69.24:0,69,1607	0/0:34,0:34:99:0,102,2352	1/1:2,28:30:84.29:1476,84,0	1/1:1,20:21:48.64:847,49,0	0/0:22,0:22:66.22:0,66,1517	0/0:22,0:22:66.18:0,66,1461	1/1:0,23:23:63.22:1111,63,0	1/1:0,31:31:78.27:1374,78,0	0/0:30,0:30:90.31:0,90,2126	0/0:37,0:37:99:0,111,2579	0/0:13,0:13:33.11:0,33,748	0/0:23,0:23:63.19:0,63,1414	0/0:28,0:28:81.28:0,81,1886	0/0:33,0:33:96.33:0,96,2261	0/0:26,0:26:78.27:0,78,1839	0/0:18,0:18:51.18:0,51,1206	0/0:65,0:65:99:0,196,4490	0/0:24,0:24:72.24:0,72,1658	1/1:2,34:36:99:1796,102,0	0/0:29,0:28:81.28:0,81,1911	1/1:0,8:8:24.08:421,24,0
chr10	78092461	.	AT	A	7104.45	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=6.508;DP=642;FS=19.545;HRun=8;HaplotypeScore=72.9643;InbreedingCoeff=0.9943;MQ=80.42;MQ0=0;MQRankSum=-1.245;QD=24.67;ReadPosRankSum=0.847;VQSLOD=3.4583;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.19:0,66,785	1/1:0,9:9:23.87:217,24,0	0/0:20,0:20:41.30:0,41,495	0/0:16,0:16:30.08:0,30,339	1/1:4,26:30:78.12:753,78,0	0/0:27,0:27:78.24:0,78,942	0/0:20,0:20:54.16:0,54,642	0/0:41,0:41:99:0,114,1312	0/0:23,0:23:66.19:0,66,785	1/1:3,23:27:38.86:654,39,0	1/1:1,21:22:60.09:579,60,0	1/1:1,16:17:45.07:435,45,0	1/1:2,22:24:57.09:550,57,0	1/1:1,16:17:45.07:434,45,0	1/1:2,27:28:78.12:753,78,0	0/0:27,0:27:75.23:0,75,906	0/0:33,0:33:81.18:0,81,938	1/1:0,6:6:12.02:116,12,0	0/0:16,0:16:45.11:0,45,514	0/0:37,0:37:99:0,99,1168	0/0:14,0:14:39.12:0,39,471	1/1:4,17:21:48.07:464,48,0	1/1:2,21:23:63.08:602,63,0	1/1:1,15:16:39.06:377,39,0	0/0:26,0:26:75.23:0,75,906	1/1:5,36:41:74.88:997,75,0	0/0:31,0:30:93.28:0,93,1118	1/1:0,6:6:18.03:174,18,0
chr10	78092673	.	A	AT	1865.90	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-1.163;DP=458;FS=18.430;HRun=8;HaplotypeScore=82.2573;InbreedingCoeff=0.9680;MQ=78.44;MQ0=6;MQRankSum=-3.041;QD=27.04;ReadPosRankSum=0.395;VQSLOD=2.2172;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:63:0,63,571	0/0:4,0:4:9:0,9,82	0/0:20,0:16:23.81:0,24,201	0/0:26,0:17:15.12:0,15,240	0/0:22,0:22:54.02:0,54,494	0/0:14,0:14:42.02:0,42,384	0/0:17,0:17:36:0,36,329	0/0:34,0:35:89.05:0,89,798	0/0:15,0:15:38.99:0,39,357	0/0:16,0:16:42.02:0,42,382	0/0:13,0:13:27:0,27,247	0/0:12,0:12:36.02:0,36,329	0/0:14,0:14:35.98:0,36,322	0/0:18,0:18:45:0,45,407	0/0:25,0:25:50.97:0,51,456	0/0:16,0:16:39.01:0,39,357	0/0:11,0:11:27.01:0,27,247	0/0:13,0:13:35.99:0,36,323	1/1:2,10:12:30.09:346,30,0	1/1:3,15:18:44.94:518,45,0	1/1:2,16:18:42.08:470,42,0	0/0:7,0:7:14.61:0,15,137	0/0:16,0:16:45.02:0,45,412	0/0:13,0:13:20.74:0,21,192	0/0:7,0:7:15.01:0,15,137	0/0:16,0:17:44.04:0,44,386	1/1:1,20:21:60.18:692,60,0	0/0:13,0:13:39.02:0,39,357
chr10	78092710	.	AGAGAGAGAGAGAGAGAGAGAGC	A	2351	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=1.201;DP=528;FS=0.000;HRun=0;HaplotypeScore=262.1807;InbreedingCoeff=0.3438;MQ=52.81;MQ0=12;MQRankSum=0.017;QD=12.31;ReadPosRankSum=-6.636;VQSLOD=0.4684;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:67.37:0,67,5203	0/0:5,0:5:6.87:0,7,145	0/0:13,0:6:17.99:0,18,721	0/0:26,0:13:26.38:0,26,812	0/0:22,0:22:3.08:0,3,461	0/1:22,0:22:14.45:14,0,1365	0/0:17,0:16:27.04:0,27,1469	0/1:44,0:43:30.45:30,0,3897	0/0:17,0:17:27.92:0,28,1477	0/0:17,0:16:14.68:0,15,1387	0/0:15,0:15:26.89:0,27,877	0/0:13,0:13:21.07:0,21,1679	0/0:21,0:21:42.10:0,42,2491	0/0:25,0:25:27.96:0,28,920	0/0:31,0:30:24.08:0,24,720	0/0:22,0:21:23.69:0,24,2414	0/0:13,0:13:6.15:0,6,1628	0/1:17,0:17:2.12:2,0,2699	1/1:7,2:7:4.24:421,4,0	1/1:11,4:15:16.28:766,16,0	1/1:14,1:14:9.18:186,9,0	0/1:17,0:17:16.78:17,0,1664	0/0:18,0:16:22.33:0,22,776	0/0:18,0:18:26.53:0,27,2019	0/1:11,0:11:53.72:54,0,918	0/1:23,0:23:99:108,0,1341	1/1:14,4:18:13.04:917,13,0	0/0:13,0:13:10.04:0,10,1397
chr10	78092720	.	AGAGAGAGAGAGC	A	5795.21	PASS	AB=0.993;AC=32;AF=0.571;AN=56;BaseQRankSum=0.749;DP=539;FS=3.159;HRun=0;HaplotypeScore=182.3992;InbreedingCoeff=-0.1691;MQ=60.32;MQ0=11;MQRankSum=-0.182;QD=12.68;ReadPosRankSum=-4.322;VQSLOD=2.8715;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:55.97:0,56,2457	1/1:5,0:5:2.44:54,2,0	0/0:20,0:13:23.30:0,23,383	0/0:25,0:15:39.69:0,40,442	1/1:21,1:22:17.99:353,18,0	0/1:26,0:26:99:153,0,587	0/1:18,0:17:50.83:51,0,419	0/1:48,0:47:99:502,0,1155	0/1:17,0:17:50.36:50,0,536	1/1:16,1:16:16.51:391,17,0	0/1:11,1:12:62.06:238,0,62	0/0:12,0:12:18.06:0,18,795	0/1:24,0:24:99:119,0,852	0/1:24,0:24:7.88:206,0,8	0/1:32,1:32:3.81:371,0,4	0/1:24,0:23:99:178,0,806	0/1:14,0:14:78.75:79,0,516	0/1:16,0:16:72.64:73,0,1249	1/1:12,0:10:23.76:367,24,0	1/1:13,0:13:21.92:452,22,0	1/1:16,0:15:14.55:123,15,0	0/1:19,0:19:99:136,0,667	0/1:18,0:16:82.65:213,0,83	0/1:19,0:19:41.93:42,0,861	0/1:15,0:15:99:196,0,372	1/1:1,20:21:56.55:798,57,0	1/1:15,0:15:38.82:571,39,0	0/1:9,0:9:78.76:79,0,127
chr10	78092722	.	AGAGAGAGAGC	A	6398.51	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=-0.162;DP=526;FS=3.919;HRun=0;HaplotypeScore=163.1072;InbreedingCoeff=-0.1067;MQ=63.56;MQ0=10;MQRankSum=0.059;QD=14.03;ReadPosRankSum=-2.478;VQSLOD=3.4961;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:56.35:0,56,2033	1/1:1,4:5:3.21:101,3,0	0/0:23,0:16:32.20:0,32,397	0/0:23,0:15:40.21:0,40,418	1/1:1,20:21:17.99:501,18,0	0/1:26,0:26:99:175,0,451	0/1:18,0:17:76.74:77,0,244	0/1:45,0:44:99:507,0,819	0/1:17,0:17:50.92:51,0,404	1/1:15,1:15:40.05:530,40,0	1/1:11,1:12:1.83:256,2,0	0/1:13,0:13:3.88:4,0,616	0/1:24,0:24:99:159,0,646	1/1:2,18:20:12.04:403,12,0	1/1:4,28:31:18.06:585,18,0	0/1:23,0:22:99:178,0,598	0/1:14,0:14:99:107,0,323	0/1:16,0:16:72.64:73,0,989	1/1:12,0:10:24.14:339,24,0	1/1:13,0:13:21.92:396,22,0	1/1:16,0:15:14.12:109,14,0	0/1:20,0:20:99:157,0,506	0/1:17,0:15:27.59:213,0,28	0/1:19,0:19:67.15:67,0,661	0/1:15,0:15:99:196,0,293	1/1:20,0:20:53.50:618,53,0	1/1:15,0:15:38.82:515,39,0	0/1:7,0:7:79.09:79,0,84
chr10	78093037	.	CGTGTGTGTGTGT	C	2170.22	PASS	AB=0.993;AC=22;AF=0.393;AN=56;BaseQRankSum=-0.966;DP=537;FS=21.980;HRun=0;HaplotypeScore=174.8128;InbreedingCoeff=0.2466;MQ=49.21;MQ0=33;MQRankSum=0.314;QD=9.12;ReadPosRankSum=5.802;VQSLOD=1.1049;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:23:30.95:0,31,641	1/1:8,0:8:7.16:219,7,0	0/0:20,0:9:8.55:0,9,64	0/0:20,0:13:14.16:0,14,156	0/1:17,1:15:10.44:168,0,10	0/1:17,0:16:14.91:15,0,67	0/0:33,0:27:20.45:0,20,173	0/1:17,0:13:3.20:3,0,100	0/1:26,0:24:17.06:17,0,58	1/1:11,18:24:37.92:378,38,0	0/1:8,0:8:4:130,0,4	0/0:22,0:20:12.39:0,12,95	0/1:17,0:16:38.99:39,0,162	1/1:21,0:19:6.26:331,6,0	1/1:23,0:21:3.93:448,4,0	1/1:12,0:12:3.01:48,3,0	0/0:27,0:23:13.70:0,14,178	0/0:21,0:20:12.29:0,12,72	0/0:8,0:7:3.82:0,4,27	0/0:10,0:8:6.89:0,7,71	0/0:52,0:48:11.45:0,11,191	0/1:7,0:6:1.20:1,0,16	1/1:16,0:16:0.43:15,0,0	0/0:32,0:33:14.41:0,14,97	0/0:13,0:11:4.12:0,4,43	0/1:18,0:17:89.16:511,0,89	0/0:14,0:13:8.23:0,8,68	1/1:1,0:1:2.80:13,3,0
chr10	78093043	.	TGTGTGTGTGTGTGC	T	3757.82	PASS	AB=1.000;AC=39;AF=0.750;AN=52;BaseQRankSum=-3.347;DP=520;FS=43.419;HRun=0;HaplotypeScore=179.2680;InbreedingCoeff=-0.1364;MQ=48.31;MQ0=36;MQRankSum=1.397;QD=7.88;ReadPosRankSum=5.908;VQSLOD=1.0733;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:24:29.60:0,30,551	1/1:9,0:9:6.72:104,7,0	1/1:11,0:4:0.47:1,0,0	./.	0/1:20,0:17:20.70:119,0,21	1/1:17,0:16:32.58:305,33,0	1/1:29,0:23:12.39:159,12,0	1/1:15,0:11:14.65:98,15,0	1/1:27,1:26:37.34:371,37,0	0/1:24,0:19:94.10:136,0,94	0/1:9,0:9:16.83:17,0,34	1/1:22,0:20:20.58:157,21,0	0/1:18,0:17:24.89:184,0,25	1/1:19,0:17:23.38:203,23,0	1/1:24,0:22:18.77:191,19,0	1/1:0,13:13:3.01:93,3,0	0/1:25,0:21:26.87:201,0,27	1/1:19,0:18:2.98:21,3,0	0/1:9,0:7:8.67:75,0,9	0/1:11,0:9:35.79:61,0,36	1/1:52,0:48:11.26:268,11,0	0/1:10,0:9:7.23:79,0,7	1/1:16,0:16:23.75:196,24,0	0/1:34,0:34:5.99:220,0,6	1/1:13,0:10:17.91:181,18,0	0/1:17,0:16:88.53:222,0,89	0/1:13,0:12:28.55:95,0,29	./.
chr10	78093053	.	TGTGC	T	4592.27	PASS	AB=1.000;AC=44;AF=0.880;AN=50;BaseQRankSum=0.947;DP=516;FS=2.567;HRun=0;HaplotypeScore=116.7254;InbreedingCoeff=-0.0944;MQ=45.74;MQ0=36;MQRankSum=2.889;QD=9.06;ReadPosRankSum=1.542;VQSLOD=4.2703;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:25:14.18:14,0,261	1/1:10,0:10:9.48:112,9,0	./.	./.	1/1:21,0:18:17.38:177,17,0	1/1:19,0:18:38.33:309,38,0	1/1:29,0:23:30.71:246,31,0	0/1:19,0:14:10.49:120,0,10	1/1:30,0:28:36.17:293,36,0	0/1:25,0:20:16.72:163,0,17	0/1:7,0:7:8.21:38,0,8	1/1:23,0:21:29.69:231,30,0	1/1:21,0:20:30.61:197,31,0	1/1:19,0:17:28.53:235,29,0	1/1:21,0:19:12.28:225,12,0	1/1:13,0:13:1.82:5,2,0	1/1:21,1:18:2.52:207,3,0	1/1:3,20:22:2.98:21,3,0	0/1:10,0:9:1.30:64,0,1	1/1:11,0:9:11.78:93,12,0	1/1:51,0:46:66.03:531,66,0	1/1:13,0:12:17.77:143,18,0	1/1:17,0:17:23.80:183,24,0	1/1:33,0:33:51.73:409,52,0	1/1:13,0:10:19.21:150,19,0	0/1:16,0:15:28.65:267,0,29	1/1:12,0:11:18.50:157,18,0	./.
chr10	78093055	.	TGC	T	4916.01	PASS	AB=0.967;AC=43;AF=0.860;AN=50;BaseQRankSum=-0.160;DP=524;FS=0.000;HRun=0;HaplotypeScore=108.0031;InbreedingCoeff=0.1835;MQ=45.65;MQ0=37;MQRankSum=2.624;QD=10.12;ReadPosRankSum=-0.621;VQSLOD=4.3139;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:26:8.31:0,8,232	1/1:9,1:10:9.32:112,9,0	./.	./.	1/1:21,1:19:16.75:166,17,0	1/1:19,0:18:36.42:300,36,0	1/1:28,0:22:33.49:269,33,0	0/1:20,0:15:5.30:156,0,5	1/1:30,0:28:32.90:305,33,0	0/1:25,0:20:28.07:161,0,28	0/1:7,0:7:2.09:53,0,2	1/1:25,0:23:32.84:256,33,0	1/1:22,0:21:36.19:242,36,0	1/1:19,0:17:28.34:235,28,0	1/1:21,0:19:14.20:226,14,0	1/1:13,0:13:0.89:2,1,0	1/1:22,0:18:9.12:249,9,0	1/1:22,0:21:2.98:21,3,0	0/1:8,2:9:5.84:81,0,6	1/1:11,0:9:11.50:93,11,0	1/1:50,0:45:68.62:556,69,0	1/1:14,0:13:17.50:143,17,0	1/1:17,0:17:23.80:183,24,0	1/1:36,0:36:62.81:501,63,0	1/1:13,0:10:17.97:147,18,0	0/1:18,0:16:4.85:292,0,5	1/1:12,0:11:20.76:165,21,0	./.
chr10	78093061	.	T	TGTGC	275.07	PASS	AB=0.893;AC=7;AF=0.135;AN=52;BaseQRankSum=-0.844;DP=517;FS=7.135;HRun=0;HaplotypeScore=146.8642;InbreedingCoeff=-0.0137;MQ=45.51;MQ0=37;MQRankSum=0.617;QD=2.67;ReadPosRankSum=-0.596;VQSLOD=1.6382;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:26:27.25:0,27,285	0/1:4,3:9:12.53:13,0,56	./.	./.	0/1:21,0:18:56.01:211,0,56	0/0:20,0:19:13.85:0,14,270	0/0:26,0:20:24.50:0,24,190	0/0:18,0:12:26.86:0,27,167	0/1:30,0:28:12.65:13,0,180	0/0:28,0:24:46.49:0,46,446	0/0:8,0:8:12:0,12,125	0/0:23,0:21:18.15:0,18,142	0/0:21,0:20:34.39:0,34,230	0/1:16,3:17:99:105,0,137	0/1:21,1:20:43.11:43,0,140	0/0:13,0:13:3.01:0,3,31	0/0:23,0:18:8.20:0,8,251	0/0:24,0:23:0.27:0,0,12	0/0:11,0:10:25.88:0,26,170	0/0:10,0:8:4.55:0,5,29	0/0:48,0:43:42.30:0,42,359	0/0:14,0:14:17.15:0,17,124	0/0:18,0:18:23.85:0,24,187	0/0:37,0:37:47.50:0,47,351	0/0:13,0:10:17.92:0,18,137	0/0:16,0:14:8.04:0,8,246	0/0:11,0:10:17.91:0,18,142	1/1:2,0:2:1.82:5,2,0
chr10	78093063	.	T	TGC	248.91	PASS	AB=0.962;AC=9;AF=0.167;AN=54;BaseQRankSum=-0.282;DP=517;FS=11.668;HRun=0;HaplotypeScore=125.7310;InbreedingCoeff=0.1637;MQ=45.29;MQ0=37;MQRankSum=0.162;QD=2.22;ReadPosRankSum=2.007;VQSLOD=1.6720;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:27:32.75:0,33,307	0/1:9,0:9:45.50:46,0,57	./.	0/0:6,0:3:3.01:0,3,41	0/1:19,1:17:55.97:138,0,56	0/0:20,0:19:38.90:0,39,315	0/0:27,0:20:26.75:0,27,222	0/0:18,0:12:26.64:0,27,179	0/0:29,0:27:37.72:0,38,287	0/0:28,0:24:47.31:0,47,445	0/0:8,0:8:12:0,12,126	0/0:20,0:18:18.20:0,18,137	0/0:21,0:20:41.60:0,42,298	0/1:19,0:17:34.70:35,0,154	0/1:20,2:20:83.60:84,0,160	0/0:13,0:13:3.01:0,3,31	0/0:23,0:18:43.02:0,43,339	1/1:24,0:23:5.40:25,5,0	0/0:11,0:10:26.71:0,27,194	0/0:11,0:9:8.80:0,9,78	0/0:46,0:41:47.51:0,48,408	0/0:14,0:14:17.73:0,18,141	0/0:18,0:18:23.81:0,24,183	0/0:38,0:38:55.02:0,55,414	0/0:13,0:10:17.93:0,18,145	0/1:15,1:14:19.58:20,0,262	0/0:10,0:9:17.74:0,18,138	1/1:2,0:2:3.01:38,3,0
chr10	78093213	.	TGC	T	1652.15	PASS	AB=0.550;AC=9;AF=0.161;AN=56;BaseQRankSum=13.723;DP=607;FS=3.435;HRun=0;HaplotypeScore=94.7467;InbreedingCoeff=0.8077;MQ=87.83;MQ0=0;MQRankSum=-10.695;QD=19.91;ReadPosRankSum=-3.051;VQSLOD=3.2500;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,150,3006	0/0:13,0:13:39.13:0,39,781	0/0:22,0:22:56.32:0,56,1046	0/0:25,0:25:49.14:0,49,1243	0/0:26,0:26:78.27:0,78,1584	0/0:24,0:24:69.24:0,69,1400	0/0:22,0:22:63.22:0,63,1252	0/0:31,0:31:93.30:0,93,1768	0/0:17,0:17:48.14:0,48,935	0/0:34,0:33:96.33:0,96,1936	0/0:22,0:22:66.21:0,66,1292	1/1:4,14:18:54:492,54,0	1/1:5,13:18:22.48:396,22,0	0/0:24,0:24:69.22:0,69,1362	0/0:22,0:22:66.23:0,66,1322	0/0:15,0:15:42.12:0,42,815	0/0:18,0:18:54.17:0,54,1042	0/0:24,0:24:66.21:0,66,1289	0/0:20,0:20:60.20:0,60,1155	0/0:24,0:24:69.22:0,69,1364	0/0:37,0:37:99:0,111,2237	1/1:4,19:23:59.59:517,60,0	1/1:2,11:13:8.01:272,8,0	0/1:2,9:11:39.94:135,0,40	0/0:20,0:20:60.21:0,60,1219	0/0:22,0:22:63.22:0,63,1266	0/0:9,0:9:27.09:0,27,548	0/0:1,0:1:3.01:0,3,61
chr10	78093216	.	TCTG	T	1695.03	PASS	AB=0.565;AC=8;AF=0.143;AN=56;BaseQRankSum=13.298;DP=607;FS=2.847;HRun=0;HaplotypeScore=105.8162;InbreedingCoeff=0.6329;MQ=89.53;MQ0=0;MQRankSum=-11.419;QD=20.93;ReadPosRankSum=-2.059;VQSLOD=2.9072;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,150,3473	0/0:13,0:13:39.13:0,39,916	0/0:23,0:23:63.11:0,63,1264	0/0:27,0:27:47:0,47,1503	0/0:26,0:26:78.27:0,78,1840	0/0:25,0:25:72.25:0,72,1676	0/0:22,0:22:63.22:0,63,1462	0/0:30,0:30:87.30:0,87,2000	0/0:18,0:18:48.16:0,48,1101	0/0:34,0:33:99:0,99,2180	0/0:22,0:22:66.23:0,66,1502	1/1:3,14:17:32.61:481,33,0	0/1:5,13:18:16.01:378,0,16	0/0:24,0:24:69.24:0,69,1572	0/0:23,0:23:69.24:0,69,1575	0/0:14,0:14:39.13:0,39,922	0/0:17,0:17:51.17:0,51,1170	0/0:24,0:24:69.23:0,69,1531	0/0:20,0:20:60.21:0,60,1319	0/0:23,0:23:66.23:0,66,1517	0/0:37,0:37:99:0,108,2417	1/1:4,19:23:43.22:548,43,0	1/1:1,11:12:5.07:283,5,0	0/1:2,9:11:51.72:152,0,52	0/0:21,0:21:63.22:0,63,1462	0/0:21,0:21:63.20:0,63,1436	0/0:9,0:9:27.09:0,27,638	0/0:1,0:1:3.01:0,3,71
chr10	78093605	.	GT	G	4193.62	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=2.200;DP=548;FS=5.560;HRun=9;HaplotypeScore=62.7213;InbreedingCoeff=0.9691;MQ=69.46;MQ0=0;MQRankSum=-1.631;QD=24.38;ReadPosRankSum=2.324;VQSLOD=4.6755;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:45.13:0,45,519	0/0:0,0:7:20.01:0,20,106	0/0:11,0:11:33.02:0,33,329	0/0:5,0:4:3.01:0,3,35	0/0:3,0:35:97.52:0,98,530	0/0:29,0:29:84.24:0,84,961	0/0:19,0:19:42.11:0,42,475	0/0:34,0:33:93.26:0,93,1057	0/0:19,0:19:57.17:0,57,658	0/0:1,0:23:51.12:0,51,292	0/0:3,0:19:45.36:0,45,239	1/1:3,9:12:24.01:220,24,0	1/1:0,21:21:63.03:577,63,0	0/0:3,0:17:48.52:0,49,270	0/0:3,0:20:42.61:0,43,217	0/0:16,0:16:42.12:0,42,485	0/0:33,0:33:84.25:0,84,969	0/0:1,0:11:28.55:0,29,151	1/1:5,22:27:31.41:542,31,0	1/1:1,33:34:93.05:851,93,0	1/1:0,6:6:18.01:165,18,0	1/1:2,19:21:54.03:494,54,0	1/1:1,22:23:66.04:604,66,0	1/1:0,7:7:18.01:165,18,0	0/0:22,0:22:57.17:0,57,658	0/0:17,0:17:42.11:0,42,474	1/1:0,21:21:63.03:577,63,0	0/0:18,0:19:50.98:0,51,568
chr10	78096338	.	ACC	A	6343.57	PASS	AB=0.813;AC=44;AF=0.786;AN=56;BaseQRankSum=-5.004;DP=537;FS=5.009;HRun=12;HaplotypeScore=78.3409;InbreedingCoeff=0.3860;MQ=63.61;MQ0=1;MQRankSum=1.267;QD=13.53;ReadPosRankSum=2.788;VQSLOD=3.7178;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:34:46.25:0,46,458	1/1:5,9:14:14.99:153,15,0	0/1:16,0:13:17.73:18,0,69	0/1:16,0:13:9.03:9,0,30	1/1:11,3:14:15.23:164,15,0	1/1:5,6:11:18.02:183,18,0	1/1:12,19:32:56.54:559,57,0	1/1:16,2:18:14.96:147,15,0	1/1:12,4:17:38.56:358,39,0	1/1:11,10:22:36.03:357,36,0	1/1:13,4:18:23.63:224,24,0	0/0:18,0:24:42.40:0,42,205	0/1:9,0:11:15.83:16,0,23	1/1:12,4:16:27.01:263,27,0	1/1:5,19:26:47.56:445,48,0	1/1:10,7:17:32.72:305,33,0	1/1:11,19:31:62.58:601,63,0	0/1:7,1:14:9.59:10,0,53	1/1:9,7:17:25.73:275,26,0	1/1:4,11:17:23.74:224,24,0	1/1:15,16:31:38.82:396,39,0	0/0:8,0:10:9.28:0,9,30	0/1:6,0:10:15.67:16,0,16	0/1:13,3:28:10.99:103,0,11	1/1:4,12:16:39.08:395,39,0	1/1:21,4:25:50.87:471,51,0	1/1:9,12:21:50.72:483,51,0	1/1:8,2:10:17.98:170,18,0
chr10	78097053	.	TCAA	T	2607.34	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.593;DP=631;FS=3.038;HRun=0;HaplotypeScore=104.8919;InbreedingCoeff=0.9814;MQ=63.51;MQ0=0;MQRankSum=-1.528;QD=29.97;ReadPosRankSum=2.037;VQSLOD=3.9955;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.17:0,60,1152	0/0:6,0:6:18.06:0,18,387	0/0:14,0:12:23.76:0,24,395	0/0:4,0:6:11.88:0,12,137	0/0:34,0:34:87.30:0,87,1853	0/0:18,0:18:48.15:0,48,977	0/0:21,0:21:51.15:0,51,972	0/0:40,0:40:90.29:0,90,1741	0/0:29,0:29:75.26:0,75,1581	0/0:29,0:29:75.25:0,75,1502	0/0:34,0:34:93.32:0,93,1929	0/0:23,0:23:66.22:0,66,1365	0/0:22,0:22:60.21:0,60,1271	0/0:25,0:25:75.24:0,75,1555	0/0:25,0:25:72.23:0,72,1459	0/0:22,0:21:54.19:0,54,1160	0/0:26,0:26:66.23:0,66,1384	0/0:21,0:21:54.64:0,55,1094	1/1:2,16:19:51.14:725,51,0	1/1:4,24:28:60.20:928,60,0	1/1:1,7:8:14.79:232,15,0	0/0:22,0:22:51.17:0,51,1051	0/0:29,0:29:78.21:0,78,1560	0/0:15,0:15:39.13:0,39,769	0/0:18,0:18:48.16:0,48,980	0/0:35,0:35:87.29:0,87,1799	1/1:3,29:32:57.08:881,57,0	0/0:8,0:8:18.06:0,18,385
chr10	78097522	.	CAG	C	227.61	PASS	AB=0.977;AC=24;AF=0.429;AN=56;BaseQRankSum=9.028;DP=577;FS=5.427;HRun=0;HaplotypeScore=107.7084;InbreedingCoeff=0.1513;MQ=62.75;MQ0=21;MQRankSum=-7.167;QD=0.61;ReadPosRankSum=3.894;VQSLOD=1.1851;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:39.13:0,39,645	0/1:10,0:10:3.55:13,0,4	0/0:36,0:12:8.27:0,8,272	0/1:40,0:7:10.78:11,0,115	0/0:13,1:13:3:0,3,25	0/1:13,1:12:1.25:1,0,20	0/1:37,1:38:3.95:4,0,38	1/1:9,0:9:4.90:40,5,0	0/1:19,1:21:18.90:51,0,19	1/1:17,0:17:2.59:27,3,0	0/1:14,0:14:1.01:1,0,50	1/1:26,1:27:11.46:40,11,0	1/1:15,1:16:10.08:42,10,0	0/1:28,1:29:11.40:37,0,11	0/1:28,0:27:12.46:12,0,17	1/1:22,3:25:5.83:25,6,0	0/1:21,1:22:27.78:28,0,30	1/1:26,0:25:12.53:43,13,0	0/0:14,0:14:38.63:0,39,490	0/0:15,0:14:26.92:0,27,356	0/0:35,0:34:56.02:0,56,692	0/1:14,0:14:2.08:2,0,21	0/1:14,0:14:13.23:13,0,17	0/0:35,0:34:1.26:0,1,5	0/1:9,0:8:1.11:1,0,24	0/0:25,0:25:75.22:0,75,1131	0/0:12,0:12:23.62:0,24,388	0/0:2,0:2:6.02:0,6,96
chr10	78097524	.	GCGCACA	G	4061.70	PASS	AB=0.530;AC=36;AF=0.643;AN=56;BaseQRankSum=1.613;DP=566;FS=0.528;HRun=0;HaplotypeScore=112.0521;InbreedingCoeff=0.7250;MQ=60.14;MQ0=22;MQRankSum=-4.264;QD=10.72;ReadPosRankSum=2.468;VQSLOD=2.2867;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:39.03:0,39,730	1/1:10,0:10:23.88:184,24,0	0/0:34,0:10:16.83:0,17,132	0/0:40,0:6:11.11:0,11,79	0/1:2,0:13:0:0,0,0	1/1:3,11:12:3.01:72,3,0	1/1:3,35:39:15.03:256,15,0	1/1:10,0:9:26.36:222,26,0	1/1:18,3:21:44.54:480,45,0	1/1:1,0:17:41.86:393,42,0	1/1:3,0:13:0.85:100,1,0	1/1:2,23:27:2.81:376,3,0	1/1:1,15:16:14.79:279,15,0	1/1:1,0:29:8.41:207,8,0	1/1:1,0:27:1.15:99,1,0	1/1:3,20:25:14.52:218,15,0	1/1:19,1:21:38.64:404,39,0	1/1:2,24:27:17.93:379,18,0	0/0:13,0:13:32.60:0,33,337	0/0:13,0:12:20.87:0,21,293	0/0:36,0:35:51.84:0,52,712	1/1:2,11:13:3.01:73,3,0	1/1:1,12:13:5.70:143,6,0	0/1:2,32:34:2.05:46,0,2	1/1:7,0:6:13.24:128,13,0	0/0:22,0:22:60:0,60,1104	0/0:11,0:11:26.20:0,26,269	0/0:2,0:2:5.99:0,6,50
chr10	78097526	.	GCACA	G	954.03	PASS	AB=0.983;AC=28;AF=0.583;AN=48;BaseQRankSum=5.520;DP=571;FS=23.951;HRun=0;HaplotypeScore=114.0027;InbreedingCoeff=0.4153;MQ=58.72;MQ0=23;MQRankSum=-4.808;QD=2.80;ReadPosRankSum=2.544;VQSLOD=0.5055;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:24.04:0,24,398	./.	./.	./.	./.	1/1:13,1:12:5.75:41,6,0	1/1:37,0:37:12.41:85,12,0	0/0:12,0:11:1.25:0,1,3	1/1:19,1:20:8.96:86,9,0	1/1:17,0:17:8.23:62,8,0	0/1:11,0:11:8.78:47,0,9	0/1:27,0:27:22.13:131,0,22	1/1:16,0:16:11.97:102,12,0	0/1:28,0:29:2.27:97,0,2	0/1:28,0:27:8.89:47,0,9	1/1:24,2:26:5.29:65,5,0	1/1:19,0:20:8.05:65,8,0	1/1:27,0:26:18.03:182,18,0	0/0:11,0:11:6.02:0,6,104	0/0:13,0:12:5.98:0,6,74	0/0:40,0:38:20.78:0,21,371	1/1:14,0:14:3:29,3,0	1/1:13,0:13:5.68:58,6,0	1/1:35,0:34:2.50:9,2,0	1/1:6,0:5:2.37:9,2,0	0/0:22,0:22:39.08:0,39,607	0/0:10,0:13:6.01:0,6,75	0/0:4,0:4:2.99:0,3,48
chr10	78097541	.	C	CACACACAT	785.67	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-3.710;DP=647;FS=43.094;HRun=0;HaplotypeScore=164.2437;InbreedingCoeff=0.2624;MQ=52.96;MQ0=32;MQRankSum=1.343;QD=5.04;ReadPosRankSum=2.000;VQSLOD=1.5087;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:39.45:0,39,476	0/0:5,0:5:2.99:0,3,24	0/0:27,0:5:2.97:0,3,20	0/1:39,0:3:0:0,0,0	0/0:19,0:16:8.99:0,9,74	0/0:19,0:16:11.88:0,12,129	0/0:43,0:43:37.43:0,37,293	0/0:13,0:12:32.14:0,32,214	0/0:24,0:22:19:0,19,349	0/0:22,0:21:41.67:0,42,423	0/0:15,0:15:14.91:0,15,182	0/0:33,0:32:31.60:0,32,392	0/0:21,0:21:6.13:0,6,245	0/0:38,0:38:35.82:0,36,422	0/0:30,0:29:20.52:0,21,225	0/0:25,0:25:18.96:0,19,235	0/0:30,0:28:56.62:0,57,486	0/0:31,0:30:26.96:0,27,436	1/1:13,0:13:1.04:164,1,0	1/1:4,9:14:2.91:129,3,0	0/1:40,0:37:72.77:93,0,73	0/0:14,0:14:6.01:0,6,90	0/0:14,0:14:8.67:0,9,106	0/0:39,0:38:17.85:0,18,141	0/0:9,0:8:11.99:0,12,102	0/1:29,0:29:99:393,0,123	0/1:15,0:14:0.83:107,0,1	0/1:5,0:5:24.06:24,0,24
chr10	78097545	.	C	CACAT	717.84	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=-3.495;DP=646;FS=21.572;HRun=0;HaplotypeScore=135.1935;InbreedingCoeff=0.2710;MQ=52.65;MQ0=31;MQRankSum=1.407;QD=6.19;ReadPosRankSum=1.978;VQSLOD=1.4292;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:47.95:0,48,496	0/0:5,0:5:5.99:0,6,49	0/0:21,0:3:2.97:0,3,20	0/0:39,0:6:5.90:0,6,65	0/0:20,0:17:11.96:0,12,94	0/0:20,0:17:17.87:0,18,152	0/0:41,0:41:40.60:0,41,317	0/0:13,0:12:32.05:0,32,214	0/0:23,0:21:23.42:0,23,281	0/0:21,0:20:47.58:0,48,385	0/0:16,0:16:20.64:0,21,189	0/0:33,0:32:31.60:0,32,290	0/0:23,0:23:12.13:0,12,239	0/0:38,0:38:41.80:0,42,365	0/0:29,0:28:24.22:0,24,210	0/0:24,0:24:21.94:0,22,207	0/0:30,0:28:53.58:0,54,431	0/0:31,0:30:29.90:0,30,318	0/1:13,0:13:50.72:51,0,100	1/1:15,0:14:2.84:57,3,0	0/1:41,0:38:43.70:44,0,113	0/0:15,0:15:11.80:0,12,101	0/0:14,0:14:11.77:0,12,100	0/0:40,0:39:27.10:0,27,206	0/0:12,0:11:14.99:0,15,127	1/1:4,23:28:19.08:625,19,0	0/1:14,0:13:60.67:62,0,61	0/1:5,0:5:16.03:16,0,16
chr10	78098355	.	G	GA	8254.38	PASS	AB=0.591;AC=37;AF=0.661;AN=56;BaseQRankSum=-3.860;DP=657;FS=0.343;HRun=10;HaplotypeScore=118.0741;InbreedingCoeff=0.9157;MQ=76.90;MQ0=0;MQRankSum=-1.511;QD=18.76;ReadPosRankSum=0.760;VQSLOD=4.1341;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:92.85:0,93,763	0/0:14,0:14:35.92:0,36,292	0/0:15,0:15:34.63:0,35,256	0/0:23,0:24:25.86:0,26,198	0/0:29,0:29:77.19:0,77,639	1/1:3,28:31:81.20:864,81,0	1/1:4,11:15:33.08:352,33,0	1/1:7,28:35:57.01:799,57,0	1/1:6,10:16:36.08:376,36,0	0/0:31,2:33:14.74:0,15,528	0/0:12,0:12:32.96:0,33,271	1/1:2,0:12:17.52:103,18,0	1/1:2,0:19:34.32:177,34,0	0/0:23,0:24:47.90:0,48,394	0/0:30,0:30:74.89:0,75,615	1/1:4,19:24:53.18:533,53,0	1/1:4,18:22:20.47:424,20,0	1/1:2,7:9:17.88:175,18,0	1/1:5,10:15:34.43:348,34,0	1/1:3,22:26:38.31:585,38,0	1/1:4,18:22:48.12:512,48,0	1/1:6,1:31:52.20:309,52,0	1/1:1,0:26:45.83:245,46,0	1/1:4,1:31:49.32:245,49,0	1/1:9,26:35:59.94:621,60,0	1/1:9,25:34:28.87:703,29,0	1/1:3,21:24:60.14:632,60,0	0/1:4,9:13:16.21:253,0,16
chr10	78099857	.	A	AT	5098.50	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-8.835;DP=435;FS=0.436;HRun=9;HaplotypeScore=45.5922;InbreedingCoeff=0.9783;MQ=69.66;MQ0=0;MQRankSum=-1.663;QD=23.82;ReadPosRankSum=2.184;VQSLOD=5.4503;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:35:91.97:0,92,775	1/1:0,6:6:12.50:134,13,0	0/0:12,0:12:14.32:0,14,141	0/0:17,0:17:28.01:0,28,247	1/1:2,8:10:9.66:235,10,0	1/1:3,18:20:48.13:531,48,0	1/1:3,9:12:24.06:265,24,0	1/1:8,26:34:78.04:809,78,0	1/1:1,11:12:30.08:332,30,0	1/1:5,10:15:30.52:315,31,0	1/1:1,13:14:36.10:398,36,0	0/0:8,0:8:20.99:0,21,182	0/0:13,0:13:35.99:0,36,312	1/1:2,9:11:27.07:299,27,0	1/1:4,11:15:21.06:232,21,0	1/1:1,9:10:15.04:166,15,0	1/1:3,22:25:15.98:553,16,0	0/0:20,0:19:50.99:0,51,443	0/0:14,0:14:35.92:0,36,301	0/0:15,0:15:44.97:0,45,386	0/0:33,0:33:74.92:0,75,639	0/0:13,0:13:32.98:0,33,284	0/0:6,0:6:18:0,18,156	0/0:24,0:24:59.96:0,60,518	1/1:0,11:11:30.08:332,30,0	1/1:0,9:9:27.07:299,27,0	0/0:11,0:11:29.96:0,30,253	1/1:3,6:9:18.05:199,18,0
chr10	78099994	.	C	CA	1424.15	PASS	AB=0.981;AC=22;AF=0.407;AN=54;BaseQRankSum=-3.106;DP=289;FS=1.416;HRun=5;HaplotypeScore=80.2996;InbreedingCoeff=0.4403;MQ=111.58;MQ0=4;MQRankSum=-2.577;QD=10.17;ReadPosRankSum=-2.719;VQSLOD=0.5137;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:14.98:0,15,140	0/0:7,0:7:6.44:0,6,17	0/0:45,0:33:23.68:0,24,332	0/0:33,1:28:46.60:0,47,380	0/1:10,0:10:4.14:4,0,23	0/1:14,0:14:2.46:2,0,25	0/0:3,0:3:0.94:0,1,2	0/1:28,0:28:27.58:77,0,28	./.	0/0:7,0:7:8.44:0,8,28	0/1:11,0:11:2.18:2,0,33	0/0:3,0:3:8.96:0,9,82	0/0:4,0:4:9.02:0,9,96	0/1:5,0:5:4.90:15,0,5	0/0:3,0:3:5.45:0,5,28	1/1:3,0:3:2.48:20,2,0	0/0:14,0:14:8.73:0,9,30	1/1:1,8:8:24.08:308,24,0	1/1:1,13:14:42.06:469,42,0	1/1:4,8:12:23.97:269,24,0	1/1:0,4:4:6.02:77,6,0	0/0:7,0:7:18.05:0,18,192	0/0:10,0:10:24.06:0,24,256	0/0:5,0:5:15.04:0,15,160	0/1:7,1:8:7.36:7,0,21	1/1:7,0:7:1.41:22,1,0	1/1:2,6:8:21.04:253,21,0	1/1:7,0:7:1.57:70,2,0
chr10	78100020	.	CGT	C	194.18	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=4.149;DP=181;FS=1.175;HRun=0;HaplotypeScore=64.4602;InbreedingCoeff=0.6155;MQ=104.96;MQ0=2;MQRankSum=-2.397;QD=7.47;ReadPosRankSum=2.001;VQSLOD=3.2191;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:8.96:0,9,68	1/1:2,0:2:5.99:50,6,0	0/0:21,0:13:16.97:0,17,185	0/0:29,0:21:5.10:0,5,135	1/1:0,4:4:3:29,3,0	0/0:9,0:8:12.89:0,13,82	0/0:1,0:1:3:0,3,25	0/0:17,0:17:44.77:0,45,270	./.	1/1:0,0:4:11.99:107,12,0	1/1:0,7:7:5.99:52,6,0	1/1:5,0:5:10.20:45,10,0	0/0:5,0:5:3.08:0,3,64	1/1:0,0:1:3:25,3,0	1/1:0,1:3:5.96:44,6,0	0/0:3,0:3:4.24:0,4,27	0/0:9,0:8:8.28:0,8,36	0/0:6,0:5:17.81:0,18,139	0/0:13,0:13:29.14:0,29,192	0/0:5,0:5:14.91:0,15,114	0/0:1,0:1:2.99:0,3,24	0/0:2,0:2:5.99:0,6,48	0/0:5,0:5:14.97:0,15,120	0/0:1,0:1:2.99:0,3,24	0/0:7,0:5:11.41:0,11,72	0/0:6,0:5:7.31:0,7,58	0/0:4,0:4:10.53:0,11,76	0/0:7,0:7:10.53:0,11,28
chr10	78100037	.	ATATATATTTTTT	A	2707.37	PASS	AB=0.967;AC=29;AF=0.690;AN=42;BaseQRankSum=-0.548;DP=134;FS=1.263;HRun=0;HaplotypeScore=59.4245;InbreedingCoeff=0.3438;MQ=78.60;MQ0=10;MQRankSum=-0.789;QD=31.48;ReadPosRankSum=2.125;VQSLOD=2.4529;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:13,0:5:6.02:0,6,119	0/0:21,0:11:16.70:0,17,207	1/1:0,0:1:2.68:11,3,0	1/1:1,5:5:15.05:550,15,0	./.	1/1:3,11:13:32.85:776,33,0	./.	1/1:6,0:5:9.03:119,9,0	1/1:0,0:2:5.34:22,5,0	1/1:5,0:5:12.03:135,12,0	1/1:2,0:2:3.01:35,3,0	0/0:1,0:1:2.97:0,3,20	1/1:1,0:2:5.69:51,6,0	1/1:0,2:2:3.01:115,3,0	1/1:1,8:9:11.92:458,12,0	0/1:6,0:5:79.22:88,0,79	0/1:9,0:9:77.77:171,0,78	1/1:3,0:1:0.47:1,0,0	./.	./.	0/0:3,0:2:3:0,3,25	./.	1/1:2,5:4:6.02:229,6,0	0/0:5,0:5:8.37:0,8,70	1/1:3,0:2:6:75,6,0	0/1:8,0:7:11.10:11,0,71
chr10	78100039	.	ATATATTT	A	2298.62	PASS	AB=1.000;AC=33;AF=0.868;AN=38;BaseQRankSum=0.010;DP=124;FS=11.298;HRun=0;HaplotypeScore=50.0221;InbreedingCoeff=0.3247;MQ=80.63;MQ0=10;MQRankSum=-2.132;QD=27.69;ReadPosRankSum=3.586;VQSLOD=1.7699;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:12,0:5:6.02:0,6,91	0/0:21,0:11:7.43:0,7,106	1/1:1,0:1:3.01:42,3,0	1/1:6,0:5:15.05:243,15,0	./.	1/1:12,0:11:29.58:303,30,0	./.	1/1:6,0:5:9:84,9,0	1/1:2,0:2:6.02:79,6,0	1/1:5,0:5:12.04:160,12,0	1/1:2,0:2:3.01:41,3,0	1/1:1,0:1:2.90:16,3,0	1/1:2,0:2:5.99:61,6,0	1/1:2,0:2:3.01:49,3,0	1/1:8,0:7:11.93:195,12,0	0/1:5,0:4:19.80:20,0,32	1/1:9,0:9:19.28:255,19,0	./.	./.	./.	./.	./.	1/1:6,0:3:6.02:97,6,0	1/1:4,1:4:9.03:176,9,0	1/1:2,0:1:3.01:57,3,0	1/1:3,6:7:21.07:534,21,0
chr10	78100041	.	ATATTTTTTTT	A	1755.51	PASS	AB=1.000;AC=22;AF=0.550;AN=40;BaseQRankSum=-1.153;DP=125;FS=10.332;HRun=0;HaplotypeScore=54.1706;InbreedingCoeff=0.3200;MQ=73.60;MQ0=12;MQRankSum=-2.269;QD=22.22;ReadPosRankSum=1.153;VQSLOD=0.7151;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:12,0:5:5.93:0,6,54	0/0:17,0:8:16.09:0,16,168	0/0:2,0:1:1.25:0,1,3	1/1:6,0:5:15.05:291,15,0	./.	1/1:13,0:11:25.02:372,25,0	./.	1/1:6,0:5:5.98:21,6,0	0/0:2,0:2:2.49:0,2,7	1/1:0,5:5:12.04:392,12,0	1/1:0,2:2:3.01:100,3,0	0/0:1,0:1:3.01:0,3,37	0/0:2,0:2:0.83:0,1,2	1/1:2,0:2:3.01:59,3,0	0/1:8,0:7:4.89:219,0,5	1/1:5,0:4:8.43:206,8,0	0/1:10,0:9:61.59:62,0,149	./.	./.	./.	0/0:2,0:1:0:0,0,0	./.	1/1:6,0:3:6.02:117,6,0	0/1:5,0:4:5.30:13,0,5	1/1:2,0:1:3:28,3,0	0/1:9,0:7:0.41:0,0,19
chr10	78100520	.	C	CA	7599.59	PASS	AB=0.560;AC=43;AF=0.860;AN=50;BaseQRankSum=2.101;DP=946;DS;FS=5.069;HRun=0;HaplotypeScore=96.2840;InbreedingCoeff=0.6599;MQ=19.76;MQ0=576;MQRankSum=-1.425;QD=11.89;ReadPosRankSum=2.687;VQSLOD=5.6867;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:73,1:42:56.81:0,57,685	0/1:3,11:12:0.94:451,0,1	./.	./.	1/1:2,19:18:38.93:500,39,0	1/1:1,6:6:9.03:129,9,0	1/1:31,9:7:15.05:223,15,0	./.	1/1:4,13:14:33.07:462,33,0	1/1:1,15:15:45.15:670,45,0	1/1:3,11:11:26.78:288,27,0	1/1:2,9:9:9.03:135,9,0	1/1:1,13:13:18.06:265,18,0	1/1:0,21:20:51.17:756,51,0	1/1:0,20:20:48.09:695,48,0	1/1:1,14:10:24.04:331,24,0	1/1:10,5:5:3.01:46,3,0	1/1:10,4:3:6.02:88,6,0	1/1:236,1:1:3.01:45,3,0	1/1:4,20:21:35.76:462,36,0	1/1:32,4:3:3.01:46,3,0	1/1:0,25:25:48.03:658,48,0	1/1:1,20:20:36.08:497,36,0	1/1:13,7:7:4.26:46,4,0	1/1:0,22:20:39.06:540,39,0	0/0:24,0:20:57.86:0,58,336	1/1:0,15:15:18.06:266,18,0	0/0:9,0:5:14.59:0,15,87
chr10	78100946	.	GA	G	16848.22	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=0.349;DP=809;FS=4.872;HRun=3;HaplotypeScore=91.3614;InbreedingCoeff=0.9994;MQ=87.58;MQ0=0;MQRankSum=-2.653;QD=32.84;ReadPosRankSum=3.079;VQSLOD=5.2412;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,159,2207	0/0:9,0:9:24.08:0,24,345	0/0:27,0:27:74.32:0,74,1017	0/0:34,0:33:93.25:0,93,1272	0/0:33,0:33:87.24:0,87,1211	1/1:1,30:31:87.27:1078,87,0	1/1:2,29:31:75.23:930,75,0	1/1:1,28:29:84.22:1002,84,0	1/1:1,32:33:87.27:1078,87,0	0/0:37,0:37:99:0,105,1511	0/0:28,0:28:84.23:0,84,1166	1/1:1,37:38:99:1300,105,0	1/1:0,30:30:87.27:1078,87,0	0/0:35,0:35:99:0,105,1512	0/0:40,0:40:99:0,120,1671	1/1:1,25:26:63.20:781,63,0	1/1:0,27:27:78.25:967,78,0	1/1:0,20:20:54.17:669,54,0	1/1:0,22:22:66.18:784,66,0	1/1:0,31:31:81.21:986,81,0	1/1:1,25:26:72.23:892,72,0	1/1:0,31:31:78.25:966,78,0	1/1:2,26:28:60.12:743,60,0	1/1:0,24:24:63.20:781,63,0	1/1:0,29:28:78.24:966,78,0	1/1:3,27:30:81.24:993,81,0	1/1:0,18:18:45.14:557,45,0	1/1:1,8:9:24.08:297,24,0
chr10	78102033	.	G	GCAAA	3624.22	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-10.089;DP=726;FS=3.011;HRun=0;HaplotypeScore=174.1233;InbreedingCoeff=-0.4113;MQ=66.93;MQ0=1;MQRankSum=1.042;QD=6.60;ReadPosRankSum=-12.086;VQSLOD=-0.6093;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:78.05:0,78,1161	0/0:15,0:15:19.75:0,20,293	0/0:25,0:22:36.01:0,36,408	0/0:42,0:35:64.99:0,65,877	0/1:27,0:27:12.16:12,0,392	0/1:21,0:21:66.96:67,0,159	0/1:23,0:23:99:177,0,168	0/1:23,0:23:99:193,0,129	0/0:16,0:16:17.94:0,18,318	0/1:30,0:30:67.55:68,0,374	0/1:24,0:24:49.09:49,0,362	0/1:29,0:29:52.36:52,0,400	0/1:27,0:27:78.19:78,0,365	0/1:29,0:29:61.26:61,0,384	0/0:23,0:23:7.72:0,8,373	0/1:29,0:29:53.08:53,0,440	0/1:23,0:23:42.97:43,0,328	0/1:33,0:33:99:129,0,360	0/1:21,0:21:75.60:76,0,222	0/1:29,0:29:99:99,0,336	0/1:31,0:31:48.46:48,0,422	0/1:29,0:29:36.06:36,0,426	0/0:23,0:23:11.91:0,12,407	0/1:30,0:30:24.15:24,0,428	0/1:17,0:17:64.04:64,0,201	1/1:8,21:29:40.27:1352,40,0	0/1:29,0:29:33.88:34,0,373	1/1:3,12:15:37.07:908,37,0
chr10	78103083	.	AATCATCATC	A	8101.31	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=-2.332;DP=691;FS=0.461;HRun=0;HaplotypeScore=219.0380;InbreedingCoeff=0.7949;MQ=61.04;MQ0=4;MQRankSum=-9.943;QD=25.24;ReadPosRankSum=0.641;VQSLOD=3.9563;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:60.21:0,60,2620	0/0:7,0:15:21.07:0,21,825	0/0:18,0:12:3.01:0,3,39	0/0:17,0:15:3.01:0,3,44	0/0:14,0:35:57.87:0,58,2225	1/1:14,18:32:42.14:1150,42,0	1/1:17,6:23:12.04:321,12,0	0/1:26,0:26:82.10:82,0,260	1/1:13,10:23:21.07:575,21,0	0/0:14,0:28:45.15:0,45,1785	0/0:4,0:15:27.08:0,27,911	1/1:13,14:27:30.10:822,30,0	1/1:15,14:30:42.14:1120,42,0	0/0:14,0:28:45.15:0,45,1611	0/0:10,0:26:45.15:0,45,1695	1/1:11,10:22:30.10:802,30,0	1/1:25,6:31:3.01:75,3,0	1/1:9,8:17:15.05:411,15,0	0/0:14,0:14:9.03:0,9,361	0/0:17,0:29:33.11:0,33,1252	0/0:29,0:29:6.02:0,6,229	1/1:14,16:31:42.14:1131,42,0	1/1:14,5:19:12.04:319,12,0	1/1:10,4:14:3.01:72,3,0	1/1:8,18:26:45.15:1221,45,0	0/0:24,0:31:51.65:0,52,1873	0/0:33,0:41:42.14:0,42,1548	0/0:8,0:10:15.05:0,15,452
chr10	78103794	.	A	AAT	8339.33	PASS	AB=0.800;AC=29;AF=0.518;AN=56;BaseQRankSum=-1.597;DP=532;FS=4.444;HRun=0;HaplotypeScore=71.0460;InbreedingCoeff=0.9229;MQ=64.98;MQ0=0;MQRankSum=0.540;QD=33.76;ReadPosRankSum=-1.158;VQSLOD=6.7170;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:72.20:0,72,880	0/0:5,0:5:12.04:0,12,151	1/1:4,0:4:2.50:9,2,0	0/1:3,0:4:0:0,0,0	0/0:31,0:31:78.24:0,78,973	1/1:1,14:15:33.11:548,33,0	1/1:3,18:21:54.18:897,54,0	1/1:7,20:28:63.19:996,63,0	1/1:2,13:15:33.11:548,33,0	0/0:31,0:31:84.27:0,84,1057	0/0:21,0:21:51.15:0,51,632	1/1:10,17:27:7.28:660,7,0	1/1:3,16:19:42.14:697,42,0	0/0:19,0:19:51.16:0,51,644	0/0:35,0:34:96.28:0,96,1187	1/1:2,20:22:19.32:859,19,0	1/1:2,11:13:33.11:549,33,0	1/1:4,7:11:21.07:349,21,0	0/0:28,0:28:66.19:0,66,809	0/0:20,0:20:57.17:0,57,706	0/0:15,0:15:39.12:0,39,492	1/1:6,9:15:27.09:448,27,0	1/1:3,14:17:36.12:598,36,0	1/1:4,11:15:24.08:399,24,0	1/1:4,17:21:48.16:780,48,0	0/0:22,1:23:7.29:0,7,632	0/0:18,0:18:45.10:0,45,527	0/0:10,0:10:24.06:0,24,289
chr10	78103979	.	TCCTCCTCCTCCC	T	8412.64	PASS	AB=0.794;AC=23;AF=0.411;AN=56;BaseQRankSum=9.134;DP=460;FS=19.043;HRun=0;HaplotypeScore=180.4240;InbreedingCoeff=0.6925;MQ=71.87;MQ0=6;MQRankSum=-8.649;QD=41.44;ReadPosRankSum=3.130;VQSLOD=2.7632;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:57.20:0,57,2047	0/0:13,0:13:30.10:0,30,941	0/0:27,0:15:19.91:0,20,324	0/0:26,0:21:15.53:0,16,281	0/0:13,0:13:23.67:0,24,842	1/1:5,8:12:8.71:684,9,0	1/1:7,9:16:6.02:166,6,0	1/1:32,0:31:18.76:720,19,0	0/1:17,3:17:23.37:357,0,23	0/0:18,0:18:30.08:0,30,818	0/0:11,0:11:18.06:0,18,633	0/1:6,9:15:19.38:600,0,19	1/1:3,10:13:1.48:1020,1,0	0/0:31,0:30:60.72:0,61,2483	0/0:19,0:19:48.12:0,48,1690	1/1:2,8:10:21.07:670,21,0	1/1:8,2:10:17.90:397,18,0	0/1:7,1:7:59.20:182,0,59	0/0:11,0:11:14.61:0,15,252	0/0:12,0:12:21.94:0,22,532	0/0:19,0:16:33.06:0,33,1205	1/1:10,7:17:24.01:992,24,0	1/1:11,6:17:34.93:886,35,0	1/1:11,2:12:24.95:501,25,0	1/1:10,9:19:11.43:1239,11,0	0/0:14,0:13:26.07:0,26,927	0/0:14,0:14:33.11:0,33,993	0/0:3,0:3:5.89:0,6,61
chr10	78104001	.	CCTT	C	259.36	PASS	AB=0.988;AC=19;AF=0.339;AN=56;BaseQRankSum=11.415;DP=465;FS=46.872;HRun=0;HaplotypeScore=180.1760;InbreedingCoeff=-0.2163;MQ=40.45;MQ0=19;MQRankSum=-8.745;QD=0.99;ReadPosRankSum=0.687;VQSLOD=1.4397;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:47.84:0,48,823	0/0:7,0:6:15.02:0,15,269	0/0:34,0:6:5.11:0,5,35	0/0:27,1:6:9.29:0,9,79	0/1:12,0:12:4.70:5,0,393	0/0:14,0:12:6.88:0,7,49	0/1:17,0:17:15.65:16,0,96	0/0:31,0:29:21.19:0,21,507	0/0:15,0:12:3.62:0,4,65	0/1:15,0:14:7.80:8,0,421	0/1:13,0:13:41.35:41,0,259	0/1:15,0:15:22.45:22,0,101	0/1:15,0:15:6.08:6,0,95	0/1:27,0:26:10.20:10,0,987	0/1:21,0:21:8.05:8,0,726	0/1:17,0:17:52.85:53,0,95	0/1:8,0:8:8.57:9,0,40	1/1:6,0:5:1.76:61,2,0	0/1:13,1:8:21.27:21,0,194	0/0:7,1:8:17.86:0,18,285	0/0:18,1:16:25.05:0,25,618	0/1:19,0:18:2.88:3,0,94	0/0:19,0:19:26.75:0,27,170	0/1:15,0:13:5.75:40,0,6	0/1:27,0:26:11.19:11,0,145	0/1:13,2:14:69.12:69,0,454	0/0:9,0:9:22.89:0,23,442	1/1:4,0:5:5.67:29,6,0
chr10	78104017	.	CTCT	C	896.89	PASS	AB=0.941;AC=20;AF=0.357;AN=56;BaseQRankSum=5.594;DP=505;FS=34.818;HRun=0;HaplotypeScore=238.2417;InbreedingCoeff=-0.3624;MQ=42.62;MQ0=16;MQRankSum=-6.200;QD=3.19;ReadPosRankSum=-3.196;VQSLOD=1.1584;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.16:0,60,1187	0/0:9,0:8:24.05:0,24,341	0/0:32,0:4:8.50:0,9,73	0/0:36,0:7:13.13:0,13,81	0/1:18,0:18:0.73:1,0,370	0/1:15,0:12:17.07:17,0,270	0/0:14,0:14:7.08:0,7,345	0/0:34,0:29:53.65:0,54,1189	0/1:12,1:12:48.51:49,0,149	0/0:23,0:22:19.14:0,19,564	0/1:16,0:16:22.54:23,0,493	0/1:15,2:15:79.30:79,0,352	0/1:19,2:20:84.09:84,0,556	0/0:32,0:32:46:0,46,1162	0/0:23,0:23:13.90:0,14,554	0/1:15,3:18:96.42:96,0,368	0/1:7,1:8:67.33:67,0,141	0/1:8,0:7:13.50:14,0,144	0/1:8,0:7:35.26:36,0,35	0/1:3,0:3:9.19:24,0,9	0/1:13,0:11:36.57:37,0,56	0/1:19,6:23:99:198,0,240	0/1:20,1:20:0.54:1,0,480	0/1:13,2:13:43.27:43,0,116	0/1:28,5:32:99:145,0,586	0/1:15,1:16:48.48:48,0,166	0/1:8,0:8:6.12:58,0,6	1/1:5,0:5:5.53:33,6,0
chr10	78104040	.	CTTG	C	1300.41	PASS	AB=0.985;AC=23;AF=0.411;AN=56;BaseQRankSum=6.462;DP=518;FS=60.171;HRun=0;HaplotypeScore=268.6648;InbreedingCoeff=-0.2660;MQ=45.74;MQ0=7;MQRankSum=-6.064;QD=3.81;ReadPosRankSum=-1.575;VQSLOD=0.6423;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:51.99:0,52,1690	0/0:11,0:11:33.11:0,33,684	0/0:37,0:10:18.11:0,18,429	0/0:38,0:13:24.98:0,25,267	0/1:22,0:22:59.28:59,0,435	0/0:12,0:10:3.66:0,4,314	0/1:15,0:15:1.08:1,0,327	0/0:32,0:27:52.66:0,53,1522	0/1:10,3:12:86.34:86,0,209	0/1:25,0:26:35.37:35,0,709	0/0:18,0:18:15.91:0,16,527	0/1:14,1:13:97.72:98,0,436	0/1:22,0:21:80.53:81,0,788	0/1:33,0:33:54.24:54,0,1093	0/1:22,0:22:34.79:35,0,554	0/1:18,0:18:99:106,0,411	0/1:11,0:10:30.62:31,0,191	0/1:6,0:6:1.23:1,0,160	0/0:1,0:1:3.01:0,3,44	1/1:5,1:6:8.08:64,8,0	0/1:9,0:8:35.47:35,0,40	0/1:28,0:26:99:167,0,326	0/1:21,0:20:59.70:60,0,591	0/1:15,0:13:19.34:19,0,105	0/1:33,0:32:99:267,0,706	0/1:13,0:13:99:101,0,102	1/1:6,0:6:9.90:68,10,0	1/1:7,0:7:15.63:99,16,0
chr10	78104041	.	TTG	T	1350.81	PASS	AB=0.747;AC=21;AF=0.375;AN=56;BaseQRankSum=8.049;DP=515;FS=74.713;HRun=0;HaplotypeScore=259.8931;InbreedingCoeff=-0.3291;MQ=45.84;MQ0=7;MQRankSum=-4.810;QD=4.03;ReadPosRankSum=1.808;VQSLOD=0.3165;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:82.16:0,82,1603	0/0:11,0:11:33.11:0,33,612	0/0:38,0:10:20.06:0,20,410	0/0:36,1:13:26.73:0,27,354	0/1:10,11:21:99:123,0,340	0/0:12,0:10:18:0,18,319	0/0:12,2:14:7.13:0,7,390	0/0:31,0:27:75.16:0,75,1404	0/1:10,3:12:42.79:43,0,222	0/1:15,10:25:99:217,0,645	0/1:12,6:18:43.50:43,0,464	0/1:12,3:13:46.27:46,0,497	0/1:16,6:21:73.46:73,0,808	0/1:21,12:33:99:153,0,950	0/1:13,10:23:99:130,0,578	0/1:12,5:17:72.89:73,0,327	0/1:6,5:10:43.49:43,0,164	0/0:6,0:6:13.29:0,13,202	0/0:1,0:1:3.01:0,3,41	0/1:3,3:6:7.59:8,0,23	0/1:7,2:8:6.39:6,0,51	0/1:16,11:25:87.18:87,0,458	0/1:18,3:20:23.96:24,0,513	0/1:11,4:13:24.64:25,0,191	0/1:24,9:32:74.25:74,0,694	0/1:5,8:13:99:146,0,125	1/1:1,5:6:5.82:63,6,0	1/1:2,5:7:17.89:138,18,0
chr10	78104053	.	C	CCCA	187.44	PASS	AB=0.865;AC=5;AF=0.089;AN=56;BaseQRankSum=1.053;DP=526;FS=17.864;HRun=0;HaplotypeScore=278.0920;InbreedingCoeff=-0.0948;MQ=46.25;MQ0=12;MQRankSum=-2.263;QD=3.47;ReadPosRankSum=-2.150;VQSLOD=0.5554;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:95.10:0,95,1642	0/0:10,0:9:24.03:0,24,381	0/0:33,0:12:33.15:0,33,504	0/0:29,0:12:21.33:0,21,212	0/0:25,0:25:54.22:0,54,676	0/0:11,0:8:9:0,9,99	0/1:12,1:13:2:2,0,143	0/0:25,0:21:44.41:0,44,507	0/0:16,0:14:23.84:0,24,244	0/0:28,0:28:80.97:0,81,976	0/0:20,0:20:44.71:0,45,531	0/0:12,0:11:29.89:0,30,227	0/0:22,0:21:60.33:0,60,548	0/0:39,0:39:99:0,106,1294	0/0:25,0:25:66.09:0,66,847	0/0:16,0:16:38.63:0,39,307	0/0:14,0:13:20.96:0,21,202	0/1:5,1:6:61.08:61,0,87	0/1:2,1:3:64.71:65,0,66	0/0:6,0:6:12.47:0,12,128	0/1:13,1:12:58.19:58,0,96	0/0:27,0:25:51.03:0,51,480	0/0:20,0:19:44.08:0,44,384	0/1:15,3:15:99:112,0,125	0/0:31,0:30:78.90:0,79,696	0/0:13,0:11:33.01:0,33,340	0/0:6,0:6:15:0,15,143	0/0:8,0:8:18.03:0,18,182
chr10	78104054	.	TC	T	3804.85	PASS	AB=0.740;AC=40;AF=0.714;AN=56;BaseQRankSum=9.218;DP=525;FS=1.850;HRun=5;HaplotypeScore=241.3544;InbreedingCoeff=0.2637;MQ=46.26;MQ0=13;MQRankSum=-9.569;QD=9.08;ReadPosRankSum=0.647;VQSLOD=-0.3202;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:83.23:0,83,1226	0/0:9,0:8:23.97:0,24,284	0/0:33,1:12:28.30:0,28,346	0/0:27,0:12:4.36:0,4,99	0/1:14,11:25:73.92:74,0,244	1/1:5,5:7:8.99:86,9,0	1/1:9,3:12:11.75:85,12,0	1/1:14,11:21:34.34:370,34,0	1/1:10,7:14:23.13:204,23,0	0/1:18,10:28:85.60:86,0,445	0/1:12,8:20:49.12:49,0,138	1/1:8,5:11:26.25:205,26,0	1/1:10,12:21:45.38:355,45,0	0/1:28,12:40:99:105,0,631	0/1:13,12:25:86.61:87,0,341	1/1:9,7:16:33.24:234,33,0	1/1:6,8:13:19.18:135,19,0	1/1:5,1:6:8.69:66,9,0	0/1:3,0:3:9.75:26,0,10	1/1:3,3:6:9.39:43,9,0	0/1:9,5:12:2.23:64,0,2	1/1:12,15:25:48.06:328,48,0	1/1:9,11:19:41.99:316,42,0	1/1:7,11:15:13.84:132,14,0	1/1:12,19:30:73.15:531,73,0	0/1:4,9:11:32.29:112,0,32	1/1:1,5:6:11.08:43,11,0	1/1:1,7:8:15.83:72,16,0
chr10	78104056	.	C	CTA	5897.79	PASS	AB=0.956;AC=36;AF=0.643;AN=56;BaseQRankSum=9.318;DP=511;FS=2.430;HRun=0;HaplotypeScore=233.8946;InbreedingCoeff=0.0358;MQ=45.59;MQ0=15;MQRankSum=-9.378;QD=14.49;ReadPosRankSum=6.503;VQSLOD=4.1449;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:95.46:0,95,1522	0/1:9,0:8:9.38:9,0,270	0/0:34,0:11:5.10:0,5,395	0/0:30,0:13:16.12:0,16,171	0/1:22,3:26:99:348,0,269	0/1:8,0:6:7.34:7,0,21	0/1:10,0:10:10.28:46,0,10	1/1:20,0:17:3.71:24,4,0	1/1:14,1:13:7.56:171,8,0	0/1:27,1:28:99:333,0,402	0/1:19,0:19:99:256,0,176	1/1:11,0:11:19.93:204,20,0	1/1:17,1:17:27.01:363,27,0	0/1:36,4:40:99:507,0,649	0/1:24,0:24:99:329,0,418	1/1:12,1:15:32.19:411,32,0	0/1:10,5:15:19.20:182,0,19	0/1:6,0:6:10.11:17,0,10	0/0:6,0:5:5.11:0,5,16	1/1:5,1:6:10.59:163,11,0	0/1:14,0:12:0.65:61,0,1	1/1:25,1:24:18.68:462,19,0	1/1:17,0:16:17.43:292,17,0	1/1:17,0:15:5.92:126,6,0	1/1:28,0:29:56.48:730,56,0	0/1:13,0:11:19.72:343,0,20	1/1:5,1:6:15.05:240,15,0	1/1:9,0:9:18.05:272,18,0
chr10	78104058	.	C	CTT	7071.17	PASS	AB=0.942;AC=39;AF=0.696;AN=56;BaseQRankSum=10.301;DP=573;FS=1.801;HRun=0;HaplotypeScore=252.0262;InbreedingCoeff=0.0637;MQ=44.48;MQ0=18;MQRankSum=-9.597;QD=14.92;ReadPosRankSum=0.159;VQSLOD=4.7276;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:98.35:0,98,1530	0/1:11,0:10:37.92:38,0,264	0/0:32,0:11:29.13:0,29,429	0/0:29,0:14:9.67:0,10,170	0/1:27,0:27:99:221,0,273	0/1:11,2:10:4.88:119,0,5	0/1:8,2:10:6.40:92,0,6	1/1:26,0:23:41.05:326,41,0	1/1:16,1:14:23.71:206,24,0	0/1:32,0:32:99:195,0,406	0/1:25,0:25:99:252,0,112	1/1:10,4:13:38.91:454,39,0	1/1:21,4:23:62.08:678,62,0	0/1:41,0:41:99:328,0,623	0/1:27,0:27:99:150,0,386	1/1:13,3:18:40.55:487,41,0	1/1:15,0:14:23.77:222,24,0	0/1:3,1:6:9.43:95,0,9	0/1:9,0:6:35.43:35,0,43	1/1:9,0:9:19.06:158,19,0	1/1:14,0:12:10.16:106,10,0	1/1:24,6:28:71.62:710,72,0	1/1:17,3:19:46.70:505,47,0	1/1:18,1:16:26.07:263,26,0	1/1:26,5:31:56.99:801,57,0	0/1:17,0:15:8.01:289,0,8	1/1:8,0:8:20.89:190,21,0	1/1:9,0:9:0.47:153,0,0
chr10	78104459	.	GTCTATCTATCTATCTATCTATCTATCTA	G	8729.87	PASS	AB=0.775;AC=30;AF=0.600;AN=50;BaseQRankSum=10.659;DP=614;FS=2.008;HRun=0;HaplotypeScore=362.5884;InbreedingCoeff=0.5963;MQ=45.07;MQ0=11;MQRankSum=-6.379;QD=23.03;ReadPosRankSum=-0.219;VQSLOD=2.6186;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:75.73:0,76,6143	0/0:4,0:5:12.50:0,12,476	./.	./.	0/0:37,0:38:69.24:0,69,4274	0/1:13,10:22:2.31:211,0,2	0/1:12,0:12:0:0,0,0	0/0:15,0:13:0:0,0,0	1/1:12,0:26:12.04:535,12,0	0/0:30,0:35:63.18:0,63,4062	0/0:13,0:14:24.06:0,24,1551	1/1:19,19:38:15.05:928,15,0	1/1:9,14:23:12.04:806,12,0	0/0:13,0:24:18.06:0,18,1029	0/0:16,0:29:27.08:0,27,1591	1/1:9,23:32:27.09:1578,27,0	1/1:19,7:26:3.48:158,3,0	1/1:16,0:16:14.91:283,15,0	1/1:10,6:14:18.04:531,18,0	1/1:11,12:23:9.03:403,9,0	1/1:17,0:16:3.01:85,3,0	1/1:8,8:16:5.75:432,6,0	1/1:15,14:30:11.37:628,11,0	./.	1/1:9,16:25:15.05:938,15,0	0/1:15,0:23:99:659,0,607	1/1:12,11:23:6.02:432,6,0	0/1:4,0:6:99:122,0,147
chr10	78104463	.	ATC	A	93.03	PASS	AB=0.864;AC=2;AF=0.036;AN=56;BaseQRankSum=8.610;DP=591;FS=0.000;HRun=0;HaplotypeScore=180.1267;InbreedingCoeff=-0.0537;MQ=44.69;MQ0=11;MQRankSum=-2.106;QD=2.91;ReadPosRankSum=6.543;VQSLOD=2.0800;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:84.28:0,84,1385	0/0:5,0:5:11.83:0,12,141	0/0:6,0:2:6.02:0,6,86	0/0:15,0:9:21.07:0,21,294	0/0:36,0:35:75.45:0,75,823	0/0:23,0:22:11.10:0,11,205	0/0:10,0:10:11.50:0,12,151	0/0:15,0:13:39.13:0,39,544	0/0:25,0:25:29:0,29,328	0/0:33,0:32:64.42:0,64,891	0/0:16,0:15:21.56:0,22,280	0/0:37,0:37:21.95:0,22,384	0/0:23,0:23:10.49:0,10,282	0/0:22,0:22:28.37:0,28,405	0/0:27,0:27:38.78:0,39,574	0/0:32,0:32:16.36:0,16,314	0/0:22,1:23:17.54:0,18,239	0/1:10,6:16:99:167,0,217	0/0:15,0:13:27.01:0,27,333	0/0:22,0:22:27.06:0,27,346	0/0:17,0:16:18.02:0,18,250	0/1:16,0:16:1.52:2,0,114	0/0:29,0:29:10.47:0,10,247	0/0:15,0:15:8.98:0,9,126	0/0:25,0:25:5.51:0,6,148	0/0:26,0:23:44.85:0,45,520	0/0:22,0:22:20.21:0,20,410	0/0:7,0:6:4.08:0,4,120
chr10	78104676	.	TGC	T	589.51	PASS	AB=0.982;AC=12;AF=0.214;AN=56;BaseQRankSum=0.725;DP=776;FS=14.967;HRun=0;HaplotypeScore=147.8543;InbreedingCoeff=-0.1327;MQ=50.87;MQ0=15;MQRankSum=-3.462;QD=2.07;ReadPosRankSum=-2.944;VQSLOD=0.5329;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:94.47:0,94,1670	0/0:10,0:10:8.65:0,9,94	0/1:17,0:4:9.99:10,0,63	0/1:37,0:12:60.27:60,0,74	0/0:28,0:28:28.95:0,29,182	0/0:27,0:26:26.83:0,27,260	0/0:31,0:31:49.10:0,49,539	0/1:40,0:38:87.07:87,0,383	0/0:17,0:17:14.01:0,14,220	0/1:28,1:28:99:187,0,284	0/0:26,0:25:38.25:0,38,274	0/0:40,0:40:43.65:0,44,374	0/0:21,0:20:18.01:0,18,185	0/1:28,0:28:13.63:14,0,165	0/0:31,1:32:7.90:0,8,164	0/0:24,0:24:38.75:0,39,362	0/0:28,0:27:41.71:0,42,382	0/1:21,0:21:55.74:56,0,151	0/1:20,2:19:99:135,0,172	0/0:39,0:39:18.59:0,19,231	0/1:27,0:26:29.40:29,0,235	0/0:30,0:30:6.58:0,7,195	0/1:34,1:35:17.41:17,0,216	0/0:37,1:37:44.10:0,44,389	0/0:36,0:36:25.36:0,25,450	0/1:23,1:22:99:104,0,110	0/0:19,0:19:21.42:0,21,143	1/1:2,3:5:3.01:38,3,0
chr10	78109649	.	GAC	G	247.20	PASS	AB=0.919;AC=8;AF=0.143;AN=56;BaseQRankSum=7.937;DP=421;FS=19.503;HRun=0;HaplotypeScore=66.0856;InbreedingCoeff=0.1272;MQ=83.71;MQ0=2;MQRankSum=0.824;QD=2.29;ReadPosRankSum=4.403;VQSLOD=0.0364;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:59.95:0,60,703	0/0:6,0:6:15.02:0,15,186	0/1:26,0:18:4.39:4,0,288	0/0:25,0:21:42.14:0,42,444	0/0:8,0:8:20.94:0,21,252	0/0:11,0:11:32.96:0,33,391	0/0:32,0:34:88.43:0,88,1241	0/0:15,0:15:39.39:0,39,379	0/0:12,0:12:32.86:0,33,468	0/0:14,0:14:33.01:0,33,366	0/0:6,0:6:12.01:0,12,156	0/0:11,0:11:24:0,24,346	0/0:10,0:10:29.95:0,30,420	0/0:15,0:15:39.96:0,40,609	0/0:14,0:14:42.12:0,42,742	0/0:12,0:12:30.06:0,30,438	0/0:29,0:29:43.48:0,43,563	0/0:23,1:27:52.27:0,52,479	0/1:6,1:7:33.67:64,0,34	0/1:9,2:12:23.62:83,0,24	0/1:23,3:26:99:113,0,111	0/0:5,0:5:9.03:0,9,132	0/0:8,0:8:18.34:0,18,168	0/0:16,0:16:24.04:0,24,359	0/0:10,0:10:26.98:0,27,339	0/1:15,1:16:8.85:9,0,232	1/1:17,0:17:10.76:97,11,0	0/1:4,0:4:8.38:8,0,16
chr10	78109650	.	ACC	A	1316.79	PASS	AB=0.609;AC=11;AF=0.196;AN=56;BaseQRankSum=0.920;DP=430;FS=20.461;HRun=12;HaplotypeScore=63.6935;InbreedingCoeff=0.5412;MQ=83.01;MQ0=2;MQRankSum=0.536;QD=12.08;ReadPosRankSum=2.635;VQSLOD=0.5879;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:32.02:0,32,335	0/0:6,0:6:8.98:0,9,73	0/0:27,0:19:1.78:0,2,195	0/0:24,0:20:26.64:0,27,290	0/0:8,0:8:9.02:0,9,110	0/0:7,0:10:17.52:0,18,174	0/0:24,0:33:71.28:0,71,793	0/0:15,0:15:6.48:0,6,69	0/0:12,0:13:24.03:0,24,300	0/0:11,0:14:16.37:0,16,162	0/0:6,0:6:9.02:0,9,113	0/0:8,0:12:17.99:0,18,191	0/0:10,0:11:24.03:0,24,272	0/0:14,0:14:30.07:0,30,408	0/0:14,0:14:36.10:0,36,487	0/0:10,0:12:24.05:0,24,303	0/0:13,0:30:33.48:0,33,346	0/1:8,2:27:7.72:8,0,113	0/1:3,5:8:9.16:89,0,9	1/1:4,8:12:23.76:224,24,0	1/1:11,14:26:45.05:457,45,0	0/0:8,0:8:12.48:0,12,131	0/0:8,0:8:3.48:0,3,45	0/0:11,0:18:20.32:0,20,215	0/0:11,0:11:12.01:0,12,146	0/1:6,9:15:38.87:214,0,39	1/1:1,16:17:41.85:427,42,0	1/1:1,3:4:6.01:61,6,0
chr10	78110513	.	G	GAA	3233.06	PASS	AB=0.709;AC=34;AF=0.708;AN=48;BaseQRankSum=-1.128;DP=389;FS=0.000;HRun=14;HaplotypeScore=83.4190;InbreedingCoeff=0.1783;MQ=58.65;MQ0=11;MQRankSum=-1.817;QD=9.34;ReadPosRankSum=-2.385;VQSLOD=1.3786;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:11:0,11,221	0/1:3,0:8:10.05:27,0,10	0/0:5,0:7:2.86:0,3,55	0/0:7,0:5:2.68:0,3,25	0/1:4,1:15:2.31:61,0,2	0/1:8,1:13:2.41:154,0,2	1/1:4,13:18:18.08:331,18,0	1/1:9,18:31:63.43:639,63,0	1/1:7,14:19:12.04:230,12,0	1/1:14,2:21:31.61:173,32,0	0/1:10,1:20:25.25:87,0,25	1/1:11,8:22:17.53:183,18,0	1/1:3,11:14:2.60:39,3,0	0/1:7,0:13:15.56:16,0,22	1/1:15,2:16:20.26:162,20,0	1/1:2,5:9:20.40:226,20,0	0/1:8,13:22:5.31:154,0,5	0/1:11,5:17:33.07:37,0,33	./.	0/1:1,0:1:0:0,0,0	./.	1/1:3,4:13:25.01:188,25,0	1/1:7,11:19:19.13:157,19,0	1/1:8,12:20:12.89:264,13,0	1/1:18,0:22:32.47:239,32,0	1/1:3,0:3:2.37:8,2,0	./.	./.
chr10	78111053	.	T	TGC	3914.76	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=12.974;DP=687;FS=0.000;HRun=0;HaplotypeScore=93.4970;InbreedingCoeff=0.8579;MQ=61.66;MQ0=2;MQRankSum=-2.921;QD=28.78;ReadPosRankSum=2.715;VQSLOD=5.1739;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:90.18:0,90,1099	0/0:5,0:5:3.01:0,3,40	0/0:18,0:7:12.03:0,12,132	0/1:11,0:7:0.82:1,0,32	0/0:28,0:28:72.11:0,72,881	0/0:23,0:22:66.14:0,66,823	0/0:33,0:33:90.17:0,90,1097	0/0:41,0:41:96.19:0,96,1105	0/0:15,0:15:45.09:0,45,555	0/0:25,0:25:72.05:0,72,906	0/0:22,0:22:51.09:0,51,607	0/0:27,0:27:72.06:0,72,847	0/0:21,0:21:51.11:0,51,626	0/0:43,0:43:99:0,117,1490	0/0:14,0:14:35.82:0,36,425	0/0:22,0:22:63.11:0,63,767	0/0:32,0:32:84.26:0,84,1042	0/0:25,0:25:66.14:0,66,825	1/1:3,14:17:41.95:565,42,0	1/1:5,14:19:35.99:591,36,0	1/1:6,25:31:1.59:641,2,0	0/0:22,0:22:54.14:0,54,681	0/0:30,0:30:74.89:0,75,961	0/0:41,0:41:99:0,120,1368	0/0:27,0:26:69.17:0,69,857	1/1:2,25:28:78.07:1219,78,0	1/1:2,20:22:41.17:637,41,0	1/1:1,7:8:15.05:262,15,0
chr10	78111620	.	A	AC	5900.45	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=17.724;DP=811;FS=9.641;HRun=1;HaplotypeScore=101.2194;InbreedingCoeff=0.9997;MQ=86.62;MQ0=0;MQRankSum=-6.471;QD=39.87;ReadPosRankSum=0.163;VQSLOD=4.2620;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,1870	0/0:9,0:9:27.09:0,27,376	0/0:25,0:25:75.24:0,75,1032	0/0:35,0:35:97.94:0,98,1298	0/0:36,0:36:99:0,108,1462	0/0:28,0:28:84.28:0,84,1174	0/0:18,0:18:51.17:0,51,713	0/0:30,0:30:84.27:0,84,1158	0/0:26,0:26:78.25:0,78,1074	0/0:48,0:47:99:0,144,1993	0/0:18,0:18:51.17:0,51,713	0/0:38,0:38:99:0,114,1592	0/0:34,0:34:96.32:0,96,1342	0/0:38,0:38:99:0,114,1577	0/0:31,0:31:93.30:0,93,1284	0/0:35,0:35:99:0,105,1450	0/0:33,0:33:99:0,99,1384	0/0:18,0:18:51.17:0,51,712	1/1:2,13:15:41.24:605,41,0	1/1:2,23:25:67.10:982,67,0	1/1:5,27:32:82.12:1209,82,0	0/0:35,0:35:99:0,105,1467	0/0:26,0:26:78.24:0,78,1055	0/0:36,0:36:99:0,108,1508	0/0:20,0:20:60.20:0,60,839	1/1:5,25:30:34.97:1162,35,0	1/1:2,27:29:87.27:1265,87,0	1/1:2,15:17:41.41:678,41,0
chr10	78111622	.	G	GA	5909.91	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=17.367;DP=796;FS=10.602;HRun=2;HaplotypeScore=99.5604;InbreedingCoeff=0.9996;MQ=86.12;MQ0=0;MQRankSum=-5.067;QD=40.76;ReadPosRankSum=0.575;VQSLOD=3.6517;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,1885	0/0:8,0:8:24.08:0,24,336	0/0:25,0:25:75.24:0,75,1034	0/0:33,0:33:95.87:0,96,1276	0/0:35,0:35:99:0,105,1450	0/0:27,0:27:81.27:0,81,1133	0/0:18,0:18:54.15:0,54,728	0/0:30,0:30:84.26:0,84,1140	0/0:25,0:25:75.25:0,75,1049	0/0:47,0:47:99:0,141,1972	0/0:18,0:18:51.17:0,51,710	0/0:37,0:37:99:0,111,1511	0/0:34,0:34:99:0,102,1401	0/0:36,0:36:99:0,108,1493	0/0:31,0:31:93.31:0,93,1300	0/0:35,0:35:99:0,105,1468	0/0:33,0:33:99:0,99,1364	0/0:17,0:17:51.17:0,51,710	1/1:2,13:15:41.88:623,42,0	1/1:2,23:25:72.23:1051,72,0	1/1:4,27:31:71.17:1101,71,0	0/0:34,0:34:99:0,102,1391	0/0:27,0:27:81.23:0,81,1090	0/0:35,0:35:99:0,105,1467	0/0:19,0:19:57.19:0,57,797	1/1:4,25:29:42.14:1137,42,0	1/1:1,27:28:84.27:1224,84,0	1/1:2,15:17:51.17:774,51,0
chr10	78112044	.	A	AACACACACACACAC	8445.90	PASS	AB=0.860;AC=36;AF=0.667;AN=54;BaseQRankSum=0.760;DP=599;FS=7.360;HRun=0;HaplotypeScore=213.2759;InbreedingCoeff=0.6916;MQ=56.55;MQ0=12;MQRankSum=-7.594;QD=21.06;ReadPosRankSum=-4.495;VQSLOD=1.9924;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:41:45.62:0,46,1567	0/0:9,0:9:18.06:0,18,691	./.	0/0:25,0:15:2.97:0,3,20	0/0:17,0:18:21.07:0,21,666	0/1:21,0:21:12.47:223,0,12	1/1:19,0:18:11.71:341,12,0	1/1:33,0:31:33.06:1028,33,0	1/1:19,0:19:18.03:553,18,0	0/0:16,0:17:27.06:0,27,809	0/0:11,0:10:2.09:0,2,674	1/1:15,0:36:4.76:108,5,0	1/1:13,0:13:11.50:336,11,0	0/0:21,0:22:30.08:0,30,926	0/0:20,0:20:36.12:0,36,1263	1/1:16,2:27:2.94:200,3,0	1/1:17,0:17:12.04:433,12,0	1/1:16,1:17:9.01:372,9,0	1/1:21,0:21:15.03:547,15,0	1/1:19,0:18:12.04:744,12,0	1/1:21,0:20:14.64:346,15,0	1/1:11,0:18:9.03:267,9,0	1/1:16,0:17:8.97:299,9,0	0/1:19,0:31:0:0,0,0	1/1:8,3:20:3.01:200,3,0	1/1:20,0:20:9.03:495,9,0	1/1:22,0:22:24.08:1314,24,0	1/1:6,0:6:12.04:640,12,0
chr10	78112055	.	A	ACACACACACACACT	8484.96	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=2.107;DP=659;FS=2.226;HRun=0;HaplotypeScore=220.2654;InbreedingCoeff=0.0872;MQ=53.00;MQ0=18;MQRankSum=-6.393;QD=21.43;ReadPosRankSum=1.412;VQSLOD=3.9866;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:72.11:0,72,1899	0/0:12,0:12:29.37:0,29,800	0/0:46,0:19:21:0,21,204	0/0:37,0:15:20.84:0,21,225	0/0:15,0:14:36.05:0,36,874	0/1:19,0:19:76.28:159,0,76	0/1:21,0:20:99:265,0,117	0/1:30,0:27:99:507,0,195	0/1:24,0:24:99:403,0,107	0/0:20,0:20:54.10:0,54,1180	0/0:10,0:9:23.51:0,24,775	0/1:33,0:33:77:77,0,125	0/1:12,0:12:99:134,0,116	0/0:28,0:27:66.05:0,66,1339	0/0:25,0:25:72.07:0,72,1688	0/1:29,0:28:99:164,0,106	0/1:19,0:19:44.83:457,0,45	0/1:18,0:18:99:496,0,153	1/1:20,0:19:34.91:925,35,0	1/1:2,15:20:12.04:817,12,0	1/1:25,0:24:20.82:250,21,0	0/1:21,0:19:99:216,0,101	0/1:17,0:17:77.78:233,0,78	0/0:30,0:30:14.91:0,15,120	0/1:20,0:19:18.94:177,0,19	1/1:6,15:27:53.10:1230,53,0	1/1:8,11:31:4.78:1433,5,0	1/1:2,4:9:9.03:545,9,0
chr10	78114737	.	AAG	A	6891.19	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.654;DP=825;FS=9.607;HRun=0;HaplotypeScore=117.1988;InbreedingCoeff=0.9977;MQ=86.55;MQ0=3;MQRankSum=-0.301;QD=39.15;ReadPosRankSum=4.375;VQSLOD=6.7667;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,2609	1/1:1,18:19:51.17:751,51,0	0/0:33,0:33:87.41:0,87,1658	0/0:40,0:38:22.65:0,23,1096	1/1:2,29:31:75.25:1105,75,0	0/0:27,0:27:78.25:0,78,1430	0/0:22,0:22:66.23:0,66,1236	0/0:40,0:40:99:0,117,2192	0/0:37,0:37:99:0,111,2047	1/1:0,33:33:99:1457,99,0	1/1:1,18:19:45.11:663,45,0	0/0:37,0:37:99:0,108,2016	0/0:32,0:32:93.31:0,93,1710	1/1:0,28:27:72.24:1061,72,0	1/1:0,46:45:99:1856,126,0	0/0:40,0:40:99:0,117,2142	0/0:28,0:27:81.26:0,81,1461	0/0:15,0:15:45.15:0,45,843	0/0:29,0:29:84.29:0,84,1571	0/0:15,0:15:45.14:0,45,811	0/0:59,0:59:99:0,178,3250	0/0:17,0:17:48.16:0,48,899	0/0:17,0:17:51.17:0,51,954	0/0:31,0:31:87.30:0,87,1630	0/0:25,0:25:75.26:0,75,1384	0/0:26,1:27:34.11:0,34,1358	0/0:25,0:25:69.24:0,69,1292	0/0:6,0:6:18.06:0,18,337
chr10	78115244	.	GA	G	5142.70	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=9.376;DP=543;FS=6.303;HRun=1;HaplotypeScore=92.6168;InbreedingCoeff=0.9692;MQ=76.32;MQ0=9;MQRankSum=-1.887;QD=25.09;ReadPosRankSum=2.464;VQSLOD=4.6893;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:28:69.67:0,70,983	0/0:13,0:12:33.09:0,33,450	0/0:42,0:26:68.83:0,69,768	0/0:36,0:20:36.78:0,37,551	0/0:16,0:16:20.50:0,20,311	1/1:2,32:34:36.40:844,36,0	1/1:1,15:16:32.61:458,33,0	1/1:1,19:17:3.85:517,4,0	1/1:0,6:6:12.04:167,12,0	0/0:19,0:19:57.05:0,57,727	0/0:24,0:24:54.15:0,54,739	1/1:2,9:11:19.71:269,20,0	1/1:1,15:16:30.07:390,30,0	0/0:16,0:16:33.08:0,33,453	0/0:23,0:23:44.72:0,45,640	1/1:1,8:9:22.32:296,22,0	1/1:1,15:11:30.02:374,30,0	1/1:0,12:11:21.07:280,21,0	0/0:16,0:16:48.15:0,48,667	0/0:31,0:31:84.25:0,84,1207	0/0:16,0:15:32.97:0,33,486	1/1:1,9:10:15.05:209,15,0	1/1:2,13:15:28.86:360,29,0	1/1:3,19:22:36.01:457,36,0	1/1:0,18:16:39.06:520,39,0	0/0:21,0:20:57.07:0,57,790	0/0:27,0:26:56.13:0,56,800	0/0:7,0:7:20.81:0,21,281
chr10	78115250	.	GGAGAAAGAGA	G	2238.05	PASS	AB=0.957;AC=22;AF=0.393;AN=56;BaseQRankSum=7.718;DP=547;FS=2.438;HRun=0;HaplotypeScore=183.1304;InbreedingCoeff=0.3666;MQ=66.99;MQ0=14;MQRankSum=-0.487;QD=7.74;ReadPosRankSum=-1.528;VQSLOD=2.7230;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:61.71:0,62,637	0/1:13,0:12:18.68:19,0,179	0/0:33,0:17:6.57:0,7,136	0/0:33,0:17:10.75:0,11,186	0/1:15,2:19:49.70:50,0,133	1/1:30,0:30:44.41:475,44,0	1/1:16,0:16:29.89:238,30,0	1/1:28,0:24:43.65:433,44,0	1/1:10,0:9:17.63:124,18,0	0/1:17,0:18:99:107,0,346	0/0:23,0:23:6.45:0,6,494	0/0:11,0:12:30.44:0,30,358	0/0:15,0:15:31.84:0,32,337	0/0:13,1:14:9.97:0,10,212	0/1:24,0:24:99:169,0,373	1/1:9,0:9:23.92:189,24,0	1/1:17,0:12:26.79:196,27,0	0/0:14,0:13:28.33:0,28,894	0/1:20,0:19:39.28:39,0,222	0/1:29,0:30:17.33:17,0,461	0/0:17,0:16:23.54:0,24,190	0/0:11,0:11:20.95:0,21,269	0/0:17,0:17:29.72:0,30,367	0/0:21,0:20:34.26:0,34,560	1/1:19,0:17:35.94:298,36,0	0/0:20,0:19:51.01:0,51,1126	0/1:25,0:24:16.64:17,0,355	0/1:10,1:10:65.09:65,0,277
chr10	78115255	.	AAGAGAGAG	A	1121.02	PASS	AB=0.928;AC=15;AF=0.288;AN=52;BaseQRankSum=1.336;DP=536;FS=7.248;HRun=0;HaplotypeScore=172.1792;InbreedingCoeff=0.2935;MQ=63.74;MQ0=16;MQRankSum=-3.531;QD=5.93;ReadPosRankSum=0.534;VQSLOD=2.0519;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:12.01:0,12,206	1/1:10,2:11:6.02:147,6,0	./.	./.	1/1:16,3:19:9.40:138,9,0	0/0:30,0:30:11.93:0,12,104	0/0:16,0:16:2.92:0,3,17	0/0:27,0:23:0.89:0,1,2	0/0:8,0:7:2.90:0,3,16	1/1:16,2:18:9.01:216,9,0	0/1:23,0:24:9.66:27,0,10	0/0:13,0:13:17.46:0,17,261	0/0:12,0:13:6.02:0,6,132	0/0:13,0:14:4.46:0,4,20	0/1:20,4:25:42.88:415,0,43	0/0:11,0:11:8.02:0,8,38	0/0:20,0:15:11.82:0,12,99	0/0:13,0:12:25.90:0,26,821	1/1:15,0:15:6.01:107,6,0	0/1:25,0:26:11.02:50,0,11	1/1:14,0:13:0.89:2,1,0	0/0:11,0:11:6.02:0,6,151	0/0:18,0:19:12.04:0,12,217	0/0:17,0:19:21:0,21,312	0/0:22,0:20:8.82:0,9,106	0/0:22,0:20:27.06:0,27,733	0/1:20,1:22:49.33:119,0,49	0/1:11,0:10:50.51:51,0,134
chr10	78115328	.	C	CA	3842.01	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-9.128;DP=571;FS=0.000;HRun=5;HaplotypeScore=93.6557;InbreedingCoeff=0.9907;MQ=80.27;MQ0=1;MQRankSum=-1.736;QD=30.49;ReadPosRankSum=1.210;VQSLOD=3.8246;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.01:0,63,640	1/1:1,8:9:21.07:276,21,0	0/0:27,0:22:57.07:0,57,569	0/0:27,0:19:31.04:0,31,410	1/1:5,32:37:84.16:1061,84,0	0/0:32,0:32:81.20:0,81,870	0/0:19,0:19:57.14:0,57,612	0/0:26,0:26:72.18:0,72,773	0/0:23,0:23:66.16:0,66,708	1/1:1,15:16:45.11:560,45,0	1/1:3,16:19:48.15:608,48,0	0/0:11,0:11:27.05:0,27,290	0/0:15,0:15:45.11:0,45,483	1/1:3,14:17:12.26:484,12,0	1/1:4,24:28:66.21:854,66,0	0/0:17,0:17:48.12:0,48,513	0/0:27,0:24:69.15:0,69,730	0/0:18,0:18:48.09:0,48,504	0/0:16,0:16:39.08:0,39,411	0/0:21,0:21:60.15:0,60,645	0/0:18,0:18:48.12:0,48,516	0/0:23,0:23:60.14:0,60,641	0/0:24,0:23:69.17:0,69,740	0/0:15,0:15:42.11:0,42,451	0/0:17,0:16:45.11:0,45,483	0/0:21,1:22:17.66:0,18,535	0/0:9,0:9:24.06:0,24,258	0/0:15,0:15:45.11:0,45,483
chr10	78119076	.	CA	C	5316.98	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=-0.709;DP=640;FS=6.801;HRun=12;HaplotypeScore=132.4618;InbreedingCoeff=0.8900;MQ=78.61;MQ0=1;MQRankSum=-3.174;QD=11.53;ReadPosRankSum=6.095;VQSLOD=3.3862;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,4:41:35.20:0,35,862	1/1:0,0:11:16.30:47,16,0	0/0:25,0:24:53.98:0,54,444	0/1:15,0:16:34.68:35,0,92	1/1:6,0:30:38.66:112,39,0	1/1:6,27:34:82.69:633,83,0	1/1:2,16:18:31.20:352,31,0	1/1:5,22:27:12.96:429,13,0	1/1:4,12:18:34.88:261,35,0	1/1:3,0:31:54.99:159,55,0	1/1:4,0:20:28.50:82,28,0	1/1:3,23:26:41.27:503,41,0	1/1:2,12:14:35.85:279,36,0	1/1:6,0:22:32.57:94,33,0	1/1:5,0:25:32.58:94,33,0	1/1:7,21:29:64.77:493,65,0	1/1:2,16:19:43.88:331,44,0	1/1:1,6:7:17.93:139,18,0	0/0:9,0:29:60.12:0,60,351	0/0:7,0:31:59.52:0,60,311	0/0:6,0:26:28.88:0,29,145	1/1:5,12:19:31.87:238,32,0	1/1:1,14:15:38.83:302,39,0	1/1:3,12:16:25.93:192,26,0	1/1:7,17:25:26.30:372,26,0	1/1:4,0:24:36.98:107,37,0	0/0:9,0:26:40.19:0,40,243	1/1:2,0:13:22.36:64,22,0
chr10	78119126	.	TGGGC	T	10095.89	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=17.627;DP=505;FS=1.972;HRun=0;HaplotypeScore=191.2730;InbreedingCoeff=0.9842;MQ=76.87;MQ0=0;MQRankSum=-16.715;QD=57.04;ReadPosRankSum=3.091;VQSLOD=6.1072;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,3130	0/0:7,0:7:21.07:0,21,607	0/0:15,0:15:27.45:0,27,778	0/0:12,0:13:14.84:0,15,390	0/0:29,0:29:87.26:0,87,2451	1/1:2,16:18:54.15:1015,54,0	1/1:0,9:9:26.98:515,27,0	1/1:3,11:14:42.12:794,42,0	1/1:1,14:15:45.14:900,45,0	0/0:28,0:28:84.28:0,84,2319	0/0:13,0:13:39.13:0,39,1085	1/1:1,14:15:42.14:874,42,0	1/1:0,15:15:45.15:933,45,0	0/0:26,0:26:78.27:0,78,2257	0/0:27,0:27:72.23:0,72,1988	1/1:1,22:23:69.22:1397,69,0	1/1:2,6:8:14.97:267,15,0	1/1:0,3:3:9.03:188,9,0	0/0:22,0:22:66.21:0,66,1720	0/0:26,0:26:75.26:0,75,2139	0/0:18,0:18:48.16:0,48,1277	1/1:1,15:16:45.14:870,45,0	1/1:0,17:17:45.07:889,45,0	1/1:0,8:8:24.08:499,24,0	1/1:0,16:16:48.08:954,48,0	0/0:30,0:30:87.30:0,87,2514	0/0:28,0:28:75.24:0,75,2089	0/0:6,0:6:15:0,15,306
chr10	78119491	.	GATATATATATATATAT	G	1390.25	PASS	AB=0.884;AC=18;AF=0.474;AN=38;BaseQRankSum=2.232;DP=252;FS=8.408;HRun=0;HaplotypeScore=109.0759;InbreedingCoeff=0.1704;MQ=61.60;MQ0=6;MQRankSum=-2.213;QD=8.80;ReadPosRankSum=-0.472;VQSLOD=1.5161;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:6.02:0,6,269	1/1:1,0:2:3.01:76,3,0	./.	0/1:32,0:12:0.32:0,0,2	./.	0/1:3,7:10:3.25:225,0,3	./.	0/1:31,0:30:10.55:218,0,11	1/1:4,0:6:3.01:78,3,0	0/0:6,0:6:3.01:0,3,48	0/0:2,0:2:0:0,0,0	1/1:2,0:5:4.83:84,5,0	./.	./.	0/0:4,0:4:3.01:0,3,48	1/1:8,3:11:3.01:132,3,0	1/1:8,6:15:14.87:449,15,0	0/0:9,0:13:8.13:0,8,47	0/1:6,0:10:45.50:123,0,45	./.	./.	0/0:5,0:5:3:0,3,25	./.	./.	0/0:2,3:7:0:0,0,0	0/1:14,0:14:0.62:1,0,108	1/1:7,0:13:3.01:112,3,0	0/1:9,0:9:6.27:6,0,9
chr10	78119533	.	T	TG	286.01	PASS	AB=0.636;AC=4;AF=0.080;AN=50;BaseQRankSum=3.696;DP=223;FS=1.246;HRun=0;HaplotypeScore=65.3567;InbreedingCoeff=0.0337;MQ=57.60;MQ0=4;MQRankSum=-2.911;QD=11.92;ReadPosRankSum=-0.528;VQSLOD=3.5227;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:15.05:0,15,207	0/0:1,0:1:3.01:0,3,32	1/1:9,0:2:1.55:4,2,0	0/0:14,0:6:6.85:0,7,61	0/0:4,0:4:9.03:0,9,124	0/0:15,0:15:17.97:0,18,224	0/0:7,0:7:21.07:0,21,289	0/0:41,0:38:99:0,108,1476	0/0:6,0:6:14.94:0,15,181	0/0:1,0:1:3.01:0,3,41	./.	0/0:4,0:4:5.81:0,6,32	./.	0/0:1,0:1:3.01:0,3,41	0/0:3,0:3:6:0,6,65	0/0:6,0:6:8.92:0,9,98	0/0:22,0:22:23.91:0,24,264	0/0:11,0:11:15.05:0,15,203	0/0:13,0:11:26.92:0,27,325	0/0:8,0:8:6.02:0,6,83	0/0:3,0:3:6.02:0,6,83	0/0:2,0:2:6:0,6,65	./.	0/0:1,0:1:3.01:0,3,41	0/0:13,0:13:9.03:0,9,124	0/1:3,4:7:57.18:195,0,57	0/0:14,0:14:17.92:0,18,221	0/1:3,4:7:23.01:176,0,23
chr10	78120460	.	A	AC	3131.76	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=3.304;DP=658;FS=0.738;HRun=8;HaplotypeScore=82.5918;InbreedingCoeff=0.9954;MQ=84.53;MQ0=0;MQRankSum=-1.692;QD=15.82;ReadPosRankSum=0.958;VQSLOD=3.7604;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:96.02:0,96,877	0/0:10,0:10:23.99:0,24,215	0/0:24,0:24:52.79:0,53,471	0/0:19,1:19:34.15:0,34,308	0/0:26,0:27:64.95:0,65,563	0/0:23,0:23:34.31:0,34,468	0/0:30,0:30:69.02:0,69,631	0/0:25,0:25:29.96:0,30,271	0/0:28,0:28:68.93:0,69,616	0/0:15,0:15:30:0,30,274	0/0:25,0:25:53.99:0,54,491	1/1:2,22:24:48.14:554,48,0	1/1:5,23:29:54.15:614,54,0	0/0:18,0:18:45:0,45,407	0/0:37,0:37:96.03:0,96,878	0/0:33,0:33:84.03:0,84,768	0/0:25,0:25:63.01:0,63,576	0/0:15,2:17:13.41:0,13,377	1/1:16,0:16:37.04:150,37,0	1/1:32,0:32:78.18:335,78,0	1/1:16,0:16:29.46:122,29,0	1/1:2,13:15:36.04:399,36,0	1/1:3,9:11:24.07:277,24,0	1/1:3,21:24:37.30:635,37,0	0/0:18,0:18:48.01:0,48,436	0/0:29,0:29:56.98:0,57,517	1/1:30,0:29:62.08:262,62,0	0/0:11,0:11:32.98:0,33,289
chr10	78120462	.	C	CCG	4242.60	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-10.965;DP=675;FS=0.000;HRun=0;HaplotypeScore=95.6311;InbreedingCoeff=0.9990;MQ=84.61;MQ0=0;MQRankSum=0.617;QD=42.01;ReadPosRankSum=2.568;VQSLOD=6.7339;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1765	0/0:10,0:10:30.08:0,30,417	0/0:25,0:25:67.03:0,67,899	0/0:20,0:19:47.78:0,48,650	0/0:28,0:28:81.19:0,81,1109	0/0:23,0:23:67.39:0,67,926	0/0:29,0:29:87.22:0,87,1208	0/0:24,0:24:66.09:0,66,777	0/0:27,0:27:81.23:0,81,1155	0/0:19,0:19:45.11:0,45,595	0/0:24,0:24:72.17:0,72,978	0/0:28,0:28:41.34:0,41,166	0/0:28,0:29:45.23:0,45,199	0/0:20,0:20:54.16:0,54,768	0/0:37,0:37:99:0,111,1602	0/0:32,0:32:96.28:0,96,1389	0/0:28,0:28:78.21:0,78,1110	0/0:18,0:18:47.37:0,47,695	1/1:2,16:20:53.97:861,54,0	1/1:1,33:35:93.03:1566,93,0	1/1:2,14:16:33.10:592,33,0	0/0:15,0:15:33.38:0,33,152	0/0:11,0:11:23.76:0,24,109	0/0:25,0:25:54.19:0,54,260	0/0:19,0:19:54.16:0,54,785	0/0:27,0:27:72.20:0,72,1003	1/1:3,26:29:69.23:1224,69,0	0/0:11,0:11:33.11:0,33,505
chr10	78125914	.	CTG	C	2075.71	PASS	AB=0.874;AC=40;AF=0.800;AN=50;BaseQRankSum=2.731;DP=697;FS=3.453;HRun=0;HaplotypeScore=104.1388;InbreedingCoeff=0.0435;MQ=59.37;MQ0=32;MQRankSum=-0.536;QD=4.09;ReadPosRankSum=2.043;VQSLOD=2.3599;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:25,3:28:80.75:81,0,113	1/1:5,0:5:2.74:12,3,0	./.	./.	1/1:21,0:28:8.52:42,9,0	0/1:18,1:19:73.64:81,0,74	0/1:22,1:23:14.58:15,0,184	1/1:21,0:21:2.97:20,3,0	1/1:13,6:21:17.88:177,18,0	1/1:19,0:20:5.68:28,6,0	0/0:10,0:10:0:0,0,0	1/1:12,3:16:11.60:91,12,0	0/1:12,4:18:29.93:79,0,30	1/1:15,0:29:29.54:141,30,0	1/1:16,1:21:5.68:28,6,0	0/0:19,0:19:18.02:0,18,242	1/1:18,8:28:29.71:290,30,0	0/1:16,1:17:8.22:27,0,8	./.	1/1:10,1:11:3.01:33,3,0	1/1:22,7:29:15.04:163,15,0	1/1:25,8:35:14.49:144,14,0	1/1:15,3:19:8.86:79,9,0	1/1:20,18:39:38.72:374,39,0	1/1:14,2:17:11.23:87,11,0	1/1:13,0:18:9.77:40,10,0	1/1:17,7:24:11.63:130,12,0	0/1:11,0:16:23.95:53,0,24
chr10	78126101	.	G	GAAGACAA	39173.94	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-8.520;DP=550;FS=1.691;HRun=0;HaplotypeScore=101.8182;InbreedingCoeff=0.9811;MQ=76.23;MQ0=0;MQRankSum=-11.205;QD=81.11;ReadPosRankSum=2.411;VQSLOD=5.2382;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.30:0,87,2285	1/1:1,6:9:21.07:845,21,0	0/0:22,0:22:60.08:0,60,1192	0/0:14,0:14:41.63:0,42,986	1/1:2,13:22:54.02:1681,54,0	1/1:1,16:24:42.14:1690,42,0	1/1:2,12:14:42.14:1624,42,0	1/1:7,15:28:81.26:2710,81,0	1/1:2,13:18:45.15:1679,45,0	1/1:1,12:26:54.13:1557,54,0	1/1:2,12:18:30.10:1135,30,0	1/1:2,13:18:36.12:1440,36,0	1/1:0,15:19:39.13:1569,39,0	1/1:3,16:22:45.15:1743,45,0	1/1:1,26:33:72.25:2797,72,0	1/1:7,18:26:66.23:2494,66,0	1/1:5,12:21:39.13:1382,39,0	1/1:2,8:13:27.56:1069,28,0	1/1:5,3:13:33.06:874,33,0	1/1:0,15:22:48.07:1660,48,0	1/1:1,4:8:12.04:351,12,0	1/1:2,10:20:33.07:1124,33,0	1/1:2,8:14:30.10:1195,30,0	1/1:3,21:28:58.44:2178,58,0	1/1:5,9:14:36.12:1381,36,0	1/1:2,12:17:51.18:1796,51,0	1/1:0,24:29:66.23:2651,66,0	1/1:0,5:6:15.05:550,15,0
chr10	78126700	.	A	AAGCACAT	4210.99	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.105;DP=622;FS=9.141;HRun=0;HaplotypeScore=139.8521;InbreedingCoeff=0.9969;MQ=91.65;MQ0=0;MQRankSum=-7.719;QD=105.27;ReadPosRankSum=-4.394;VQSLOD=5.2282;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:99:0,102,2581	0/0:8,0:8:24.08:0,24,647	0/0:30,0:30:74.89:0,75,1712	0/0:23,0:23:60.03:0,60,1428	0/0:26,0:26:78.25:0,78,1976	0/0:23,0:23:69.24:0,69,1860	0/0:14,0:14:42.14:0,42,1132	1/1:16,19:40:99:4211,114,0	0/0:12,0:12:33.11:0,33,888	0/0:31,0:31:90.31:0,90,2381	0/0:26,0:26:75.25:0,75,1930	0/0:20,0:20:60.19:0,60,1561	0/0:18,0:18:54.15:0,54,1342	0/0:11,0:11:33.11:0,33,890	0/0:26,0:26:75.24:0,75,1955	0/0:28,0:28:78.26:0,78,2008	0/0:21,0:21:63.22:0,63,1696	0/0:24,0:24:69.24:0,69,1788	0/0:21,0:21:57.20:0,57,1482	0/0:23,0:23:66.23:0,66,1780	0/0:17,0:17:48.15:0,48,1238	0/0:19,0:19:57.20:0,57,1521	0/0:23,0:23:69.24:0,69,1860	0/0:10,0:10:30.10:0,30,769	0/0:25,0:25:75.26:0,75,1996	0/0:21,0:21:60.21:0,60,1609	0/0:28,0:28:81.28:0,81,2075	0/0:19,0:18:57.15:0,57,1244
chr10	78127347	.	G	GCATCA	1879.38	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.815;DP=845;FS=1.694;HRun=0;HaplotypeScore=165.0900;InbreedingCoeff=0.9994;MQ=84.38;MQ0=0;MQRankSum=-5.371;QD=52.21;ReadPosRankSum=-5.200;VQSLOD=2.8549;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,2504	0/0:10,0:10:30.10:0,30,609	0/0:33,0:33:87.28:0,87,1627	0/0:22,0:22:48.16:0,48,931	0/0:33,0:33:90.28:0,90,1733	0/0:30,0:30:75.26:0,75,1522	0/0:26,0:26:69.22:0,69,1356	1/1:22,14:36:72.19:1974,72,0	0/0:41,0:41:99:0,99,2010	0/0:48,0:48:99:0,123,2461	0/0:23,0:23:57.20:0,57,1135	0/0:37,0:37:93.29:0,93,1794	0/0:33,0:33:90.31:0,90,1818	0/0:34,0:34:84.27:0,84,1627	0/0:46,0:46:99:0,111,2151	0/0:32,0:32:75.24:0,75,1457	0/0:19,0:19:51.16:0,51,993	0/0:14,0:14:42.10:0,42,812	0/0:24,0:24:54.10:0,54,907	0/0:26,0:26:72.22:0,72,1390	0/0:50,0:50:99:0,129,2584	0/0:25,0:25:69.21:0,69,1299	0/0:17,0:17:42.14:0,42,847	0/0:25,0:25:63.22:0,63,1272	0/0:33,0:33:87.28:0,87,1674	0/0:41,0:41:99:0,114,2280	0/0:24,0:24:69.21:0,69,1327	0/0:18,0:18:51.18:0,51,1036
chr10	78127415	.	CTTT	C	17391.37	PASS	AB=0.752;AC=50;AF=0.893;AN=56;BaseQRankSum=0.941;DP=784;FS=0.489;HRun=12;HaplotypeScore=169.0015;InbreedingCoeff=0.6307;MQ=76.17;MQ0=5;MQRankSum=-2.034;QD=24.53;ReadPosRankSum=7.000;VQSLOD=1.7127;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:35:93.27:0,93,1662	1/1:1,15:16:42.12:530,42,0	0/0:37,1:27:18.32:0,18,468	0/1:52,0:38:34.76:35,0,316	1/1:3,32:35:75.01:906,75,0	1/1:2,26:28:58.72:737,59,0	1/1:3,14:17:42.12:531,42,0	0/1:5,1:20:11.47:11,0,57	1/1:5,25:31:54.07:662,54,0	1/1:6,38:44:99:1397,114,0	1/1:1,27:28:60.02:736,60,0	1/1:3,31:34:75.21:948,75,0	1/1:0,23:23:54.17:681,54,0	1/1:4,31:33:69.19:872,69,0	1/1:6,37:43:87.23:1099,87,0	1/1:6,30:36:69.19:872,69,0	1/1:0,18:18:45.14:565,45,0	1/1:4,11:15:24.02:303,24,0	1/1:5,12:17:36.08:431,36,0	1/1:3,25:28:69.17:865,69,0	1/1:5,11:16:30.04:379,30,0	1/1:1,31:33:76.69:960,77,0	1/1:4,25:29:66.18:834,66,0	1/1:4,25:29:63.16:796,63,0	1/1:4,21:25:48.13:606,48,0	1/1:3,23:28:66.99:837,67,0	1/1:2,19:21:51.14:643,51,0	1/1:0,4:4:12.04:151,12,0
chr10	78127882	.	A	AC	19232.76	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=7.649;DP=840;FS=10.564;HRun=4;HaplotypeScore=128.4745;InbreedingCoeff=0.9975;MQ=84.30;MQ0=0;MQRankSum=-5.059;QD=27.05;ReadPosRankSum=6.131;VQSLOD=3.0685;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,105,1180	1/1:0,18:18:51.17:698,51,0	0/0:28,0:28:66.17:0,66,738	0/0:23,0:23:29.14:0,29,462	1/1:0,29:29:69.23:943,69,0	1/1:32,0:32:92.98:824,93,0	1/1:19,0:19:53.97:464,54,0	0/0:38,0:38:99:0,108,1202	1/1:32,0:32:87.01:774,87,0	1/1:1,42:44:99:1734,129,0	1/1:0,22:22:60.20:813,60,0	1/1:40,0:40:99:981,111,0	1/1:39,0:39:99:960,105,0	1/1:2,32:34:87.29:1190,87,0	1/1:2,47:49:99:1871,138,0	1/1:25,0:25:68.93:586,69,0	1/1:32,0:32:90.01:803,90,0	1/1:15,0:15:41.96:356,42,0	1/1:24,0:24:68.37:480,68,0	1/1:26,0:26:77.72:603,78,0	1/1:33,0:33:89.68:697,90,0	1/1:28,0:28:75.02:677,75,0	1/1:42,0:42:99:1015,114,0	1/1:28,0:28:77.95:667,78,0	1/1:25,0:25:62.91:525,63,0	1/1:35,1:36:97.93:695,98,0	1/1:33,0:33:92.73:736,93,0	1/1:6,0:6:17.94:141,18,0
chr10	78127886	.	C	CG	21335.23	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=2.007;DP=849;FS=10.685;HRun=0;HaplotypeScore=119.2252;InbreedingCoeff=0.9914;MQ=81.85;MQ0=0;MQRankSum=-6.538;QD=29.23;ReadPosRankSum=7.299;VQSLOD=3.7496;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1492	1/1:18,0:18:48.70:252,49,0	0/0:24,0:24:69.23:0,69,953	0/0:22,0:22:38.16:0,38,661	1/1:30,0:30:15.72:303,16,0	1/1:0,34:34:96.24:1497,96,0	1/1:1,18:19:56.93:873,57,0	0/0:36,0:36:99:0,108,1494	1/1:2,32:34:87.30:1386,87,0	1/1:43,0:43:99:611,118,0	1/1:24,0:24:17.69:260,18,0	1/1:1,41:42:99:1769,111,0	1/1:0,39:39:99:1658,105,0	1/1:34,0:34:38.69:395,39,0	1/1:49,0:49:99:635,105,0	1/1:0,27:27:69.24:1100,69,0	1/1:1,30:31:87.30:1386,87,0	1/1:0,14:14:42.10:642,42,0	1/1:0,0:25:68.28:473,68,0	1/1:1,0:28:77.72:603,78,0	1/1:0,0:37:89.68:697,90,0	1/1:0,28:28:75.26:1185,75,0	1/1:1,41:42:99:1816,114,0	1/1:1,29:30:78.27:1244,78,0	1/1:0,26:26:63.21:1005,63,0	1/1:1,0:37:97.75:668,98,0	1/1:0,0:33:92.73:736,93,0	1/1:0,0:6:17.94:141,18,0
chr10	78128329	.	TC	T	864.76	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.220;DP=786;FS=0.000;HRun=2;HaplotypeScore=70.4061;InbreedingCoeff=0.9999;MQ=91.27;MQ0=0;MQRankSum=-0.142;QD=34.59;ReadPosRankSum=-3.733;VQSLOD=2.4199;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,156,2293	0/0:13,0:13:39.12:0,39,564	0/0:38,0:38:68.99:0,69,1289	0/0:24,0:24:66.15:0,66,900	0/0:24,0:24:69.22:0,69,1011	0/0:30,0:30:87.29:0,87,1283	0/0:24,0:24:72.22:0,72,1042	1/1:0,25:25:75.23:960,75,0	0/0:28,0:28:84.26:0,84,1219	0/0:32,0:32:93.31:0,93,1377	0/0:20,0:20:60.16:0,60,834	0/0:28,0:28:78.26:0,78,1165	0/0:22,0:22:63.20:0,63,923	0/0:19,0:19:48.15:0,48,700	0/0:34,0:34:99:0,99,1480	0/0:40,0:40:99:0,117,1753	0/0:27,0:27:81.27:0,81,1213	0/0:17,0:17:51.17:0,51,762	0/0:32,0:32:90.29:0,90,1319	0/0:29,0:29:81.27:0,81,1212	0/0:35,0:35:99:0,99,1455	0/0:26,0:26:78.26:0,78,1164	0/0:27,0:27:81.23:0,81,1150	0/0:28,0:28:84.28:0,84,1255	0/0:25,0:25:75.22:0,75,1082	0/0:37,0:37:99:0,111,1645	0/0:30,0:30:90.29:0,90,1325	0/0:20,0:20:60.20:0,60,898
chr10	78128498	.	CAGTT	C	7067.37	PASS	AB=0.532;AC=11;AF=0.196;AN=56;BaseQRankSum=14.791;DP=701;FS=4.296;HRun=0;HaplotypeScore=113.9341;InbreedingCoeff=0.8865;MQ=88.04;MQ0=0;MQRankSum=-4.992;QD=49.08;ReadPosRankSum=2.316;VQSLOD=5.7958;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,3574	0/0:10,0:10:30.10:0,30,822	0/0:27,0:27:72.22:0,72,1807	0/0:27,0:27:75.26:0,75,1845	0/0:32,0:32:90.31:0,90,2399	0/0:18,0:18:54.19:0,54,1407	0/0:31,0:31:90.31:0,90,2452	0/0:33,0:33:96.32:0,96,2479	0/0:20,0:20:60.21:0,60,1634	0/0:27,0:27:81.28:0,81,2212	0/0:18,0:18:54.17:0,54,1324	0/0:28,0:28:84.27:0,84,2244	0/0:24,0:24:72.22:0,72,1865	0/0:23,0:23:66.23:0,66,1801	0/0:24,0:24:72.25:0,72,1935	0/0:29,0:29:87.30:0,87,2336	0/0:30,0:30:87.30:0,87,2348	0/0:14,0:14:42.14:0,42,1110	1/1:0,20:20:57.20:1086,57,0	1/1:0,26:26:72.25:1372,72,0	1/1:3,28:31:66.23:1278,66,0	0/0:16,0:16:48.16:0,48,1315	0/0:23,0:23:66.23:0,66,1796	0/0:37,0:37:99:0,111,2952	0/0:22,0:22:66.22:0,66,1733	0/1:4,29:33:71.12:1593,0,71	1/1:1,24:25:63.22:1215,63,0	1/1:0,9:9:27.09:523,27,0
chr10	78130172	.	GGTGTGTGTGTGTGTGTGTATGT	G	457.26	PASS	AB=0.650;AC=1;AF=0.018;AN=56;BaseQRankSum=4.263;DP=667;FS=4.693;HRun=0;HaplotypeScore=339.5929;InbreedingCoeff=-0.0352;MQ=53.40;MQ0=27;MQRankSum=-1.034;QD=17.59;ReadPosRankSum=-2.088;VQSLOD=1.4676;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:41:89.77:0,90,5653	0/0:10,0:10:18.05:0,18,573	0/0:54,0:20:3.18:0,3,373	0/0:66,0:23:27.06:0,27,737	0/0:16,0:15:30.09:0,30,986	0/0:18,0:22:39.11:0,39,1495	0/0:30,0:27:48.85:0,49,1921	0/1:12,14:26:44.09:532,0,44	0/0:18,0:20:31.05:0,31,1219	0/0:11,0:11:27.09:0,27,840	0/0:13,0:13:21.06:0,21,733	0/0:20,0:20:33.10:0,33,1067	0/0:24,0:24:45.15:0,45,1438	0/0:27,0:27:42.57:0,43,2003	0/0:18,0:17:12.40:0,12,715	0/0:25,0:27:34.03:0,34,1536	0/0:24,0:25:40:0,40,1582	0/0:25,0:23:57.17:0,57,2094	0/0:20,0:19:33.13:0,33,480	0/0:11,0:11:18.03:0,18,239	0/0:32,0:31:15.96:0,16,268	0/0:14,0:14:11.91:0,12,635	0/0:14,0:14:21.06:0,21,807	0/0:35,0:37:54.30:0,54,1942	0/0:18,0:19:36.49:0,36,2173	0/0:18,0:18:38.75:0,39,699	0/0:10,0:10:2.59:0,3,156	0/0:8,0:7:14.91:0,15,169
chr10	78130181	.	GTGTGTGTGTA	G	1887.01	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=-5.878;DP=653;FS=11.739;HRun=0;HaplotypeScore=213.4062;InbreedingCoeff=0.0384;MQ=47.99;MQ0=28;MQRankSum=-2.189;QD=5.10;ReadPosRankSum=-7.395;VQSLOD=-0.7230;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:86.79:0,87,2824	0/1:8,0:8:10.96:11,0,150	0/1:48,0:11:8.85:9,0,92	0/1:62,0:18:24.59:25,0,196	0/0:17,0:15:19.78:0,20,187	0/1:23,0:23:16.80:17,0,417	0/0:36,0:32:0.26:0,0,531	0/1:20,0:20:17.97:260,0,18	0/1:19,0:19:71.17:71,0,309	0/1:14,0:13:20.86:21,0,223	0/1:14,0:13:3.96:4,0,113	0/0:21,0:21:24.06:0,24,360	0/0:22,0:22:4.51:0,5,445	0/0:27,0:26:13.37:0,13,577	0/0:17,0:14:11.95:0,12,245	0/0:25,0:25:10.66:0,11,582	0/0:27,0:27:37.47:0,37,581	0/1:26,0:23:4.40:4,0,723	1/1:7,14:19:46.06:534,46,0	1/1:11,0:11:12.03:217,12,0	0/1:31,0:28:39.12:131,0,39	0/0:15,0:14:11.94:0,12,306	0/0:13,0:13:13.02:0,13,284	0/1:40,0:40:46.60:47,0,773	0/0:21,0:20:15.80:0,16,795	0/1:16,0:16:91.84:277,0,92	1/1:11,0:11:18:304,18,0	1/1:6,0:5:12.48:129,12,0
chr10	78130189	.	GTA	G	4342.77	PASS	AB=0.888;AC=38;AF=0.679;AN=56;BaseQRankSum=-2.652;DP=598;FS=4.278;HRun=0;HaplotypeScore=134.8609;InbreedingCoeff=-0.1778;MQ=44.85;MQ0=26;MQRankSum=0.124;QD=8.01;ReadPosRankSum=-6.674;VQSLOD=2.9135;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:36.46:0,36,1179	0/1:7,0:7:7.18:61,0,7	0/1:39,0:9:21.58:22,0,37	0/1:46,0:9:32.88:33,0,50	1/1:12,5:15:11.49:263,11,0	1/1:20,4:24:6.99:266,7,0	0/1:28,5:29:32.96:180,0,33	1/1:15,0:15:21.77:186,22,0	0/1:16,3:19:16.54:222,0,17	1/1:15,0:13:22.13:243,22,0	1/1:9,5:13:21:218,21,0	0/1:18,1:19:10.13:81,0,10	0/1:22,1:23:39.28:155,0,39	1/1:11,13:23:3.41:367,3,0	0/1:5,9:11:25.18:36,0,25	0/1:20,3:23:7.98:170,0,8	0/1:21,3:24:25.44:153,0,25	0/1:23,2:22:59.07:198,0,59	1/1:18,0:16:47.76:404,48,0	1/1:9,2:11:12:118,12,0	1/1:32,0:28:8.30:90,8,0	0/0:13,2:14:9:0,9,42	0/1:8,3:11:22.50:47,0,22	0/1:33,4:37:99:100,0,104	0/1:15,5:19:70.33:153,0,70	1/1:0,15:15:31.59:303,32,0	1/1:9,2:11:13.79:156,14,0	1/1:6,0:5:14.95:117,15,0
chr10	78130230	.	TGC	T	1530.32	PASS	AB=0.892;AC=22;AF=0.423;AN=52;BaseQRankSum=-1.829;DP=474;FS=6.398;HRun=0;HaplotypeScore=121.5702;InbreedingCoeff=0.1193;MQ=42.76;MQ0=26;MQRankSum=-0.192;QD=5.33;ReadPosRankSum=0.207;VQSLOD=2.7953;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:32.58:0,33,508	0/0:5,1:5:5.91:0,6,41	./.	./.	1/1:2,8:8:4.78:86,5,0	0/0:24,0:24:31.44:0,31,265	0/0:30,1:28:7.14:0,7,276	0/1:21,0:17:54.29:54,0,61	0/1:17,1:16:30.26:30,0,122	1/1:11,2:8:18.78:110,19,0	0/0:10,1:10:1.74:0,2,4	1/1:13,0:13:6.01:64,6,0	1/1:13,4:17:7.57:177,8,0	1/1:21,4:22:0.20:107,0,0	0/1:11,0:11:6.84:79,0,7	0/0:19,1:19:27.27:0,27,240	0/0:21,0:21:37.55:0,38,302	0/1:19,3:18:38.73:114,0,39	1/1:12,1:11:10.33:96,10,0	0/1:4,5:7:0:0,0,0	0/1:37,1:32:24.03:79,0,24	0/1:18,2:16:3.76:164,0,4	0/1:11,6:17:6.70:180,0,7	0/1:27,7:33:18.51:298,0,19	0/0:15,0:15:32.93:0,33,286	0/0:9,0:9:0.88:0,1,37	0/0:9,1:7:2.97:0,3,20	0/1:6,0:6:24.30:49,0,24
chr10	78130232	.	C	CGT	1125.80	PASS	AB=0.988;AC=24;AF=0.500;AN=48;BaseQRankSum=1.557;DP=486;FS=15.333;HRun=0;HaplotypeScore=132.3635;InbreedingCoeff=0.2961;MQ=43.38;MQ0=25;MQRankSum=-0.077;QD=4.20;ReadPosRankSum=-1.072;VQSLOD=1.9865;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,1:38:5.80:0,6,256	0/0:6,0:5:5.71:0,6,41	./.	./.	1/1:10,0:8:5.99:64,6,0	0/0:25,0:25:24.02:0,24,230	0/0:32,0:29:0.66:0,1,235	0/0:22,0:18:3.01:0,3,33	0/1:18,0:16:17.42:17,0,69	1/1:13,0:9:8.89:55,9,0	0/0:11,0:10:0.89:0,1,2	1/1:13,0:14:5.80:44,6,0	1/1:18,0:18:14.51:94,15,0	1/1:24,1:22:9:95,9,0	0/1:11,0:11:8.65:58,0,9	0/0:20,0:19:18.02:0,18,175	0/0:21,0:21:26.96:0,27,255	0/1:21,0:18:17.98:77,0,18	1/1:13,0:11:8.98:83,9,0	./.	0/1:36,1:32:29.45:78,0,29	1/1:18,0:15:17.25:162,17,0	0/1:17,0:17:8.01:157,0,8	1/1:34,0:33:11.17:242,11,0	0/0:14,0:14:21.02:0,21,202	1/1:9,0:10:3.90:12,4,0	./.	0/1:6,0:6:22.99:49,0,23
chr10	78130234	.	T	TGA	1550.12	PASS	AB=0.936;AC=20;AF=0.385;AN=52;BaseQRankSum=2.408;DP=499;FS=1.183;HRun=0;HaplotypeScore=134.0412;InbreedingCoeff=0.0656;MQ=43.88;MQ0=25;MQRankSum=3.390;QD=5.07;ReadPosRankSum=0.404;VQSLOD=3.1925;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:51.03:0,51,599	0/0:7,0:6:5.82:0,6,85	./.	./.	0/1:11,0:10:7.47:7,0,38	0/1:16,7:23:1.87:2,0,152	0/1:33,0:30:44.17:44,0,173	0/0:23,0:19:36.50:0,37,238	0/1:19,0:17:73.37:73,0,97	0/0:14,0:10:14.03:0,14,110	0/0:11,0:10:5.99:0,6,50	1/1:4,11:15:6.48:82,6,0	1/1:11,6:20:1.45:191,1,0	0/0:25,0:22:4.15:0,4,139	0/1:13,0:13:7.23:7,0,78	0/1:19,1:19:22.08:22,0,131	0/0:21,0:21:1.83:0,2,216	0/1:15,10:21:73.85:114,0,74	0/0:11,0:9:7.85:0,8,73	0/0:11,0:9:3:0,3,25	0/1:38,0:32:8.36:8,0,104	1/1:4,14:15:18.06:289,18,0	1/1:13,3:16:14.27:327,14,0	1/1:27,7:33:28.15:487,28,0	0/1:14,0:14:48.05:48,0,88	0/0:11,0:11:10.05:0,10,108	0/0:14,0:11:5.84:0,6,35	0/1:6,0:6:7.37:7,0,59
chr10	78131213	.	C	CT	12204.28	PASS	AB=0.747;AC=49;AF=0.875;AN=56;BaseQRankSum=-7.099;DP=545;FS=2.242;HRun=9;HaplotypeScore=55.0360;InbreedingCoeff=0.4757;MQ=72.06;MQ0=0;MQRankSum=-3.072;QD=23.70;ReadPosRankSum=0.333;VQSLOD=5.6505;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:45.85:0,46,392	1/1:3,12:15:27.07:299,27,0	0/1:13,0:12:5.57:6,0,107	0/0:11,0:10:3.81:0,4,134	1/1:7,18:26:51.86:547,52,0	1/1:5,20:26:24.92:486,25,0	1/1:1,9:10:21.06:232,21,0	1/1:9,27:36:78.20:850,78,0	1/1:0,15:15:42.11:465,42,0	0/1:8,9:17:21.15:236,0,21	1/1:2,17:20:27.97:477,28,0	1/1:2,22:25:53.98:578,54,0	1/1:2,16:18:48.13:530,48,0	1/1:1,15:16:42.11:465,42,0	1/1:4,24:28:63.17:697,63,0	1/1:3,9:12:24.06:266,24,0	1/1:2,27:29:75.20:830,75,0	1/1:2,26:27:66.18:730,66,0	1/1:1,15:16:22.01:448,22,0	1/1:3,20:25:62.76:633,63,0	0/1:3,7:10:25.04:205,0,25	1/1:2,11:14:13.57:324,14,0	1/1:1,20:21:54.15:597,54,0	1/1:0,8:9:23.90:247,24,0	1/1:5,14:20:47.95:505,48,0	1/1:5,17:22:48.11:521,48,0	1/1:1,33:34:85.34:932,85,0	1/1:6,3:9:9.02:100,9,0
chr10	78131369	.	C	CGGCCACTAGCTA	11356.42	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-4.587;DP=610;FS=17.902;HRun=0;HaplotypeScore=197.5515;InbreedingCoeff=0.9870;MQ=85.50;MQ0=0;MQRankSum=-12.533;QD=88.03;ReadPosRankSum=-1.887;VQSLOD=3.2360;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.32:0,93,3172	0/0:7,0:7:9.03:0,9,323	0/0:22,0:22:44.98:0,45,1305	0/0:20,0:20:26.30:0,26,385	0/0:19,0:19:36.03:0,36,1194	0/0:20,0:20:39.12:0,39,1315	0/0:23,0:23:45.13:0,45,1420	0/0:31,0:31:69.19:0,69,2145	0/0:17,0:17:42.14:0,42,1468	0/0:19,0:19:42.14:0,42,1456	0/0:13,0:13:27.09:0,27,968	0/0:26,0:26:69.24:0,69,2462	0/0:32,0:32:84.27:0,84,2894	0/0:21,0:21:57.17:0,57,1810	0/0:24,0:24:66.17:0,66,2137	0/0:15,0:15:30.09:0,30,994	0/0:21,0:21:60.21:0,60,2134	0/0:34,0:34:93.23:0,93,3004	1/1:12,4:27:66.22:2846,66,0	1/1:11,7:21:24.08:1359,24,0	1/1:7,6:19:33.11:1572,33,0	0/0:14,0:14:36.12:0,36,1291	0/0:18,0:18:39.13:0,39,1310	0/0:34,0:35:93.29:0,93,3073	0/0:17,0:17:32.76:0,33,933	1/1:9,7:21:51.12:2159,51,0	1/1:7,10:24:33.11:1838,33,0	1/1:9,4:17:30.10:1582,30,0
chr10	78132059	.	AAAAG	A	5207.74	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.331;DP=619;FS=4.813;HRun=0;HaplotypeScore=102.4610;InbreedingCoeff=0.9958;MQ=67.89;MQ0=0;MQRankSum=-1.959;QD=35.67;ReadPosRankSum=3.453;VQSLOD=4.8249;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:57.18:0,57,1309	1/1:0,6:6:15.05:248,15,0	0/0:18,0:16:27.97:0,28,595	0/0:12,0:12:27.07:0,27,578	1/1:4,25:29:63.07:951,63,0	0/0:17,0:17:45.15:0,45,1088	0/0:15,0:15:36.12:0,36,846	0/0:30,0:30:69.22:0,69,1530	0/0:17,0:17:45.11:0,45,1000	1/1:10,38:48:99:1826,114,0	1/1:7,17:24:48.08:733,48,0	0/0:20,0:20:51.16:0,51,1164	0/0:27,0:27:69.24:0,69,1684	1/1:5,9:14:27.09:446,27,0	1/1:3,22:25:63:1004,63,0	0/0:22,0:22:57.18:0,57,1342	0/0:34,0:34:75.20:0,75,1617	0/0:32,0:32:84.29:0,84,2001	0/0:13,0:13:33.10:0,33,646	0/0:32,0:32:81.28:0,81,1924	0/0:14,0:14:33.11:0,33,805	0/0:25,0:25:60.21:0,60,1465	0/0:21,0:21:48.16:0,48,1152	0/0:14,0:14:36.11:0,36,793	0/0:26,0:26:63.22:0,63,1519	0/0:20,0:20:48.16:0,48,1098	0/0:30,0:30:72.21:0,72,1610	0/0:11,0:11:27.09:0,27,660
chr10	78132696	.	TAC	T	14774.81	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=14.922;DP=695;FS=0.938;HRun=0;HaplotypeScore=129.2059;InbreedingCoeff=0.9993;MQ=82.52;MQ0=0;MQRankSum=-6.186;QD=35.95;ReadPosRankSum=6.677;VQSLOD=6.8035;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1859	0/0:13,0:13:36.12:0,36,683	0/0:29,0:29:87.25:0,87,1574	0/0:21,0:21:48.17:0,48,969	0/0:34,0:34:99:0,102,1771	1/1:1,22:23:48.13:709,48,0	1/1:0,18:18:42.14:640,42,0	0/0:20,0:20:60.19:0,60,1086	1/1:1,23:25:48.13:709,48,0	0/0:33,0:33:98.91:0,99,1788	0/0:26,0:26:72.24:0,72,1334	1/1:1,24:25:57.15:845,57,0	1/1:0,19:19:48.16:733,48,0	0/0:39,0:39:99:0,117,2180	0/0:35,0:34:99:0,105,1991	1/1:1,23:24:45.15:687,45,0	1/1:1,23:24:66.22:1009,66,0	1/1:0,23:23:54.18:818,54,0	1/1:1,17:18:54.18:800,54,0	1/1:2,28:30:69.11:977,69,0	1/1:0,31:31:81.23:1213,81,0	1/1:0,23:23:57.19:871,57,0	1/1:1,31:32:84.24:1258,84,0	1/1:2,17:19:42.09:615,42,0	1/1:0,19:19:54.14:800,54,0	1/1:0,31:31:87.28:1290,87,0	1/1:2,14:16:32.96:479,33,0	1/1:2,9:11:21.07:321,21,0
chr10	78134327	.	A	AT	2987.69	PASS	AB=0.917;AC=13;AF=0.232;AN=56;BaseQRankSum=-10.621;DP=585;FS=0.405;HRun=8;HaplotypeScore=54.4631;InbreedingCoeff=0.8960;MQ=79.29;MQ0=0;MQRankSum=-1.403;QD=23.53;ReadPosRankSum=0.735;VQSLOD=4.0503;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:39:99:0,110,988	1/1:0,6:6:18.05:208,18,0	0/0:19,0:19:6.27:0,6,294	0/0:10,0:10:17.99:0,18,157	1/1:3,10:13:30.05:331,30,0	0/0:22,0:22:66.02:0,66,599	0/0:34,0:34:90.03:0,90,819	0/0:27,0:27:62.98:0,63,566	0/0:20,0:20:57.02:0,57,517	1/1:4,18:23:57:637,57,0	1/1:1,21:23:62.94:677,63,0	0/0:17,0:17:42:0,42,380	0/0:18,1:19:22.39:0,22,450	1/1:0,18:18:48.14:554,48,0	1/1:0,22:22:66.20:762,66,0	0/0:25,0:25:63.03:0,63,577	0/0:27,0:27:78.02:0,78,709	0/0:19,0:19:50.99:0,51,459	0/0:24,0:24:69.02:0,69,625	0/0:30,0:30:72.02:0,72,659	0/0:9,0:9:27.01:0,27,247	0/0:18,0:18:51:0,51,458	0/0:25,0:25:69.03:0,69,632	0/0:21,0:21:54.03:0,54,494	0/0:20,0:20:60.03:0,60,549	0/1:20,2:22:6.21:6,0,454	0/0:20,0:20:60.03:0,60,549	0/0:13,0:13:35.98:0,36,322
chr10	78135775	.	C	CT	8269.33	PASS	AB=0.969;AC=36;AF=0.643;AN=56;BaseQRankSum=-11.074;DP=656;FS=7.141;HRun=9;HaplotypeScore=94.2030;InbreedingCoeff=0.8017;MQ=71.33;MQ0=5;MQRankSum=-2.438;QD=19.83;ReadPosRankSum=1.850;VQSLOD=4.9776;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,102,876	1/1:4,8:12:24.54:264,25,0	0/0:42,0:30:51.05:0,51,398	0/0:34,0:16:1.40:0,1,81	1/1:6,30:36:82.18:882,82,0	1/1:6,20:26:54.15:597,54,0	1/1:4,9:13:18.05:199,18,0	0/0:34,0:34:66.18:0,66,321	1/1:1,10:11:21.06:232,21,0	1/1:16,18:34:73.69:722,74,0	1/1:9,8:18:38.70:368,39,0	1/1:2,18:20:36.10:398,36,0	1/1:5,15:20:30.08:332,30,0	1/1:5,13:18:28.84:355,29,0	1/1:5,15:19:23.80:278,24,0	1/1:5,27:32:69.19:763,69,0	1/1:3,31:35:78.14:838,78,0	0/1:16,0:16:28.05:39,0,28	0/0:5,0:19:28.51:0,29,83	0/0:3,0:26:40.51:0,41,119	0/0:0,0:5:10.19:0,10,30	1/1:4,20:25:50.97:545,51,0	1/1:4,18:23:39.11:431,39,0	1/1:1,13:14:39.11:431,39,0	1/1:7,22:29:54.13:589,54,0	0/1:3,1:15:5.66:6,0,53	0/0:2,0:26:44.43:0,44,131	0/0:6,0:11:6.10:0,6,18
chr10	78135784	.	TG	T	2265.78	PASS	AB=0.986;AC=22;AF=0.393;AN=56;BaseQRankSum=3.113;DP=629;FS=6.499;HRun=6;HaplotypeScore=110.1581;InbreedingCoeff=0.6566;MQ=78.74;MQ0=3;MQRankSum=1.886;QD=8.06;ReadPosRankSum=-0.369;VQSLOD=0.5424;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,114,1368	1/1:10,0:10:25.27:121,25,0	0/0:39,1:33:42.06:0,42,589	0/1:31,0:19:14.20:14,0,169	1/1:35,0:35:73.32:411,73,0	0/0:21,0:21:59.77:0,60,456	0/0:14,0:14:32.92:0,33,261	1/1:4,21:25:63.09:641,63,0	0/0:13,0:13:29.90:0,30,232	1/1:33,0:33:69.99:424,70,0	1/1:21,0:21:50.72:309,51,0	0/0:18,0:18:38.84:0,39,295	0/0:24,0:24:56.74:0,57,439	1/1:19,0:19:36.26:247,36,0	1/1:19,0:18:30.07:209,30,0	0/0:28,0:28:74.68:0,75,564	0/0:33,0:33:83.92:0,84,624	0/1:16,0:16:4.52:5,0,39	0/0:19,0:19:12.60:0,13,123	0/1:26,0:26:27.99:28,0,61	0/0:9,0:9:4.66:0,5,87	0/0:24,0:24:59.76:0,60,455	0/0:22,0:22:50.81:0,51,391	0/0:13,0:13:38.85:0,39,294	0/0:27,0:27:71.29:0,71,548	0/1:14,0:14:4.88:5,0,40	1/1:25,0:25:1.65:44,2,0	1/1:5,0:5:2.60:7,3,0
chr10	78136548	.	GCACACA	G	7480.76	PASS	AB=0.801;AC=34;AF=0.607;AN=56;BaseQRankSum=-0.330;DP=777;FS=21.424;HRun=0;HaplotypeScore=206.0113;InbreedingCoeff=0.7657;MQ=50.54;MQ0=16;MQRankSum=-8.568;QD=14.67;ReadPosRankSum=0.747;VQSLOD=2.6013;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:51:96.33:0,96,2739	1/1:13,1:16:21.07:326,21,0	0/0:17,0:7:3.01:0,3,37	0/0:28,0:15:2.81:0,3,80	0/1:14,14:31:17.58:182,0,18	1/1:11,6:18:30.06:484,30,0	1/1:35,11:46:35.03:489,35,0	0/1:24,1:22:39.89:79,0,40	1/1:10,18:29:30.01:537,30,0	1/1:18,9:30:57.07:953,57,0	0/0:8,0:12:11.28:0,11,153	1/1:8,18:27:35.94:542,36,0	1/1:20,13:33:43.29:963,43,0	1/1:16,16:33:32.94:489,33,0	1/1:9,13:23:23.91:282,24,0	1/1:19,14:34:27.01:455,27,0	1/1:18,5:23:15.94:303,16,0	1/1:16,0:20:6.02:84,6,0	0/0:12,0:16:11.23:0,11,152	0/0:10,0:18:32.30:0,32,431	0/0:33,0:56:67.91:0,68,911	1/1:14,7:24:20.98:286,21,0	1/1:7,8:17:15.05:290,15,0	1/1:33,5:39:23.47:372,23,0	1/1:15,12:27:21.02:366,21,0	0/0:29,0:31:69.18:0,69,1391	0/0:16,0:24:33.08:0,33,483	0/0:1,0:8:21.07:0,21,496
chr10	78136652	.	TCACA	T	4033.08	PASS	AB=0.685;AC=16;AF=0.286;AN=56;BaseQRankSum=0.583;DP=910;FS=1.862;HRun=0;HaplotypeScore=227.4146;InbreedingCoeff=0.6288;MQ=48.08;MQ0=41;MQRankSum=-4.556;QD=14.56;ReadPosRankSum=1.604;VQSLOD=3.1838;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:38:92.51:0,93,1947	0/1:2,1:10:23.09:23,0,80	0/0:58,0:2:6.01:0,6,91	0/0:62,0:6:5.99:0,6,75	0/0:5,0:24:43.87:0,44,222	0/0:28,0:27:63.22:0,63,1493	0/0:34,0:33:66.18:0,66,1505	1/1:17,0:23:30.50:278,31,0	0/0:28,0:28:69.22:0,69,1545	0/0:19,0:34:64.81:0,65,364	0/0:7,0:16:24.57:0,25,117	0/0:29,0:30:68.92:0,69,1605	0/0:48,0:48:99:0,129,2773	0/1:10,2:32:8.33:8,0,211	0/0:10,1:32:66.43:0,66,355	0/0:30,0:30:60.19:0,60,1371	0/0:39,0:38:69.13:0,69,1517	0/1:17,13:28:99:585,0,200	0/1:15,2:14:25.17:124,0,25	1/1:3,15:19:30.05:445,30,0	1/1:35,49:76:24.92:844,25,0	0/0:31,0:31:68.96:0,69,1402	0/0:19,0:20:47.77:0,48,1076	0/0:47,0:46:68.44:0,68,1455	0/0:26,0:27:56.85:0,57,1221	1/1:15,14:28:31.24:764,31,0	1/1:5,14:19:42.09:652,42,0	1/1:2,8:10:20.94:310,21,0
chr10	78136678	.	TAC	T	356.69	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.095;DP=911;FS=0.000;HRun=0;HaplotypeScore=253.8251;InbreedingCoeff=0.8733;MQ=46.88;MQ0=63;MQRankSum=-4.782;QD=15.51;ReadPosRankSum=-2.069;VQSLOD=2.5337;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:96.33:0,96,1600	0/0:12,0:12:20.60:0,21,277	0/0:53,0:4:12.01:0,12,138	0/0:47,0:5:6.02:0,6,98	0/0:26,0:24:36:0,36,561	0/0:27,0:26:48.15:0,48,781	0/0:29,0:26:57.18:0,57,938	1/1:8,15:19:36.09:451,36,0	0/0:33,0:33:87.25:0,87,1420	0/0:38,0:35:84.21:0,84,1267	0/0:18,0:18:35.52:0,36,546	0/0:31,0:31:77.91:0,78,1228	0/0:51,0:50:99:0,117,1905	0/0:33,0:33:70.60:0,71,1006	0/0:36,0:34:63.21:0,63,1028	0/0:37,0:37:89.96:0,90,1446	0/0:38,0:37:82.49:0,82,1308	0/0:22,0:22:42.53:0,43,621	0/0:20,0:11:24.08:0,24,407	0/0:20,0:20:48.14:0,48,761	0/0:80,1:72:82.28:0,82,1331	0/0:27,0:27:69.23:0,69,1111	0/0:23,0:23:50.77:0,51,867	0/0:51,0:50:65.90:0,66,1053	0/0:28,0:27:69.20:0,69,1119	0/0:27,0:23:66.20:0,66,1038	0/0:24,0:21:42.11:0,42,653	0/0:9,0:9:24.08:0,24,406
chr10	78136698	.	T	TCA	20953.17	PASS	AB=0.857;AC=49;AF=0.875;AN=56;BaseQRankSum=-2.083;DP=818;FS=4.485;HRun=0;HaplotypeScore=180.6845;InbreedingCoeff=0.7915;MQ=49.16;MQ0=40;MQRankSum=2.125;QD=30.41;ReadPosRankSum=1.962;VQSLOD=6.3108;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:81.21:0,81,999	1/1:3,4:7:12.04:197,12,0	0/0:51,0:12:7.56:0,8,280	0/0:39,0:8:13.85:0,14,156	1/1:6,15:20:26.76:416,27,0	1/1:8,19:26:48.16:797,48,0	1/1:5,22:26:28.43:1002,28,0	1/1:17,18:28:54.17:855,54,0	1/1:10,21:33:66.20:1062,66,0	1/1:9,21:30:75.07:1176,75,0	1/1:3,12:16:32.59:546,33,0	1/1:10,16:26:50.85:827,51,0	1/1:8,32:39:99:1839,111,0	1/1:10,22:32:56.51:876,57,0	1/1:12,16:28:47.76:785,48,0	1/1:8,26:35:65.25:1051,65,0	1/1:7,31:40:67.13:1271,67,0	0/1:7,2:11:20.12:105,0,20	1/1:9,10:16:33.10:517,33,0	1/1:5,12:17:38.78:564,39,0	1/1:34,29:57:68.97:1249,69,0	1/1:5,22:27:72.22:1149,72,0	1/1:5,18:23:42.14:698,42,0	1/1:6,32:38:54.07:897,54,0	1/1:8,20:27:60.20:990,60,0	1/1:6,25:28:78.27:1271,78,0	1/1:9,7:18:33.09:516,33,0	1/1:2,6:8:18.06:297,18,0
chr10	78136744	.	TCTCA	T	1113.73	PASS	AB=0.953;AC=10;AF=0.179;AN=56;BaseQRankSum=0.927;DP=696;FS=17.134;HRun=0;HaplotypeScore=217.0549;InbreedingCoeff=-0.2526;MQ=46.84;MQ0=27;MQRankSum=-3.544;QD=5.25;ReadPosRankSum=-3.377;VQSLOD=0.9218;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:89.94:0,90,1372	0/0:6,0:6:11.06:0,11,198	0/0:37,0:3:8.66:0,9,48	0/0:44,0:8:20.77:0,21,153	0/0:18,0:18:30.16:0,30,548	0/0:28,0:28:7.79:0,8,326	0/0:41,0:39:58.37:0,58,643	0/1:28,2:20:26.25:225,0,26	0/1:19,0:19:7.52:8,0,154	0/0:29,0:29:77.59:0,78,1161	0/0:16,0:16:27.17:0,27,400	0/1:22,0:21:27.98:28,0,82	0/0:34,0:32:36.55:0,37,590	0/0:23,0:23:29.17:0,29,361	0/0:20,0:18:26.88:0,27,334	0/0:25,0:22:0.22:0,0,291	0/0:25,0:24:58.81:0,59,455	0/1:24,0:24:52.11:52,0,555	0/1:6,0:6:46.88:47,0,69	0/1:5,4:11:62.79:123,0,63	0/1:44,5:49:99:294,0,330	0/0:31,0:30:32.16:0,32,388	0/0:10,0:8:3.47:0,3,26	0/0:32,0:26:42.24:0,42,413	0/0:29,0:26:3.17:0,3,231	0/1:25,2:27:99:354,0,262	0/1:11,0:11:71.95:72,0,131	0/1:6,0:6:50.86:51,0,79
chr10	78136746	.	T	TCACACA	3597.87	PASS	AB=0.982;AC=43;AF=0.827;AN=52;BaseQRankSum=-3.108;DP=730;FS=3.967;HRun=0;HaplotypeScore=247.0058;InbreedingCoeff=0.3547;MQ=46.37;MQ0=31;MQRankSum=1.225;QD=6.17;ReadPosRankSum=-0.609;VQSLOD=2.2859;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:11.50:0,11,369	1/1:7,0:7:8.97:70,9,0	./.	./.	0/1:16,1:18:23.82:203,0,24	1/1:28,0:28:17.91:284,18,0	1/1:43,0:41:8.27:98,8,0	1/1:29,0:17:14.48:160,14,0	1/1:20,0:19:9.03:154,9,0	1/1:26,1:27:38.11:473,38,0	1/1:15,0:17:14.30:163,14,0	1/1:23,0:22:20.39:365,20,0	1/1:33,0:31:12:211,12,0	1/1:22,2:25:17.95:250,18,0	1/1:19,2:20:8.18:167,8,0	1/1:25,0:23:11.50:171,12,0	1/1:27,0:26:9.44:83,9,0	0/0:23,0:24:35.62:0,36,579	1/1:9,0:7:5.75:32,6,0	1/1:15,0:15:6.61:83,7,0	0/1:61,0:56:36.19:164,0,36	1/1:33,0:32:3.33:87,3,0	1/1:11,0:9:3:25,3,0	1/1:32,0:26:11.99:123,12,0	1/1:30,0:27:2.85:23,3,0	0/1:33,0:32:99:117,0,186	1/1:13,0:12:10.11:94,10,0	0/0:8,0:8:5.70:0,6,73
chr10	78140029	.	ATT	A	4902.40	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.459;DP=737;FS=3.467;HRun=9;HaplotypeScore=109.6077;InbreedingCoeff=0.9990;MQ=77.63;MQ0=0;MQRankSum=-3.031;QD=31.43;ReadPosRankSum=-0.104;VQSLOD=4.6493;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.21:0,93,1464	0/0:12,0:12:33.10:0,33,504	0/0:22,0:23:57.18:0,57,876	0/0:11,0:14:27.61:0,28,366	0/0:34,0:34:99:0,99,1609	0/0:30,0:30:84.28:0,84,1354	0/0:14,0:15:39.13:0,39,615	1/1:5,38:43:99:1306,114,0	0/0:31,0:31:87.30:0,87,1417	0/0:23,0:23:63.22:0,63,1034	0/0:31,0:31:90.31:0,90,1477	0/0:33,0:33:78.26:0,78,1250	0/0:29,0:29:78.25:0,78,1218	0/0:24,0:24:69.24:0,69,1131	0/0:31,0:32:92.79:0,93,1461	0/0:33,0:33:90.31:0,90,1473	0/0:30,0:31:86.77:0,87,1363	0/0:2,0:18:39.93:0,40,140	1/1:1,18:19:54.16:629,54,0	1/1:1,36:37:99:1254,108,0	1/1:2,16:18:48.14:559,48,0	0/0:23,0:23:63.21:0,63,1022	0/0:13,0:13:36.11:0,36,563	0/0:23,0:23:63.22:0,63,1033	0/0:24,0:24:69.24:0,69,1132	0/0:7,0:41:99:0,102,543	1/1:6,33:39:99:1154,99,0	0/0:1,0:10:22.46:0,22,79
chr10	78140580	.	AT	A	5346.77	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.518;DP=705;FS=3.613;HRun=8;HaplotypeScore=65.7973;InbreedingCoeff=0.9996;MQ=76.09;MQ0=0;MQRankSum=-1.876;QD=24.30;ReadPosRankSum=-1.232;VQSLOD=5.2625;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:54.15:0,54,641	0/0:15,0:15:42.12:0,42,496	0/0:14,0:14:24.07:0,24,290	0/0:13,0:13:39.11:0,39,457	0/0:37,0:37:99:0,108,1288	0/0:26,0:26:69.20:0,69,823	0/0:21,0:21:60.17:0,60,714	1/1:7,23:30:72.09:687,72,0	0/0:22,0:22:57.17:0,57,679	0/0:24,1:25:46.29:0,46,841	0/0:28,0:28:72.22:0,72,870	0/0:28,0:28:75.21:0,75,893	0/0:38,0:38:99:0,108,1288	0/0:27,0:27:78.23:0,78,933	0/0:24,0:24:72.14:0,72,839	0/0:32,0:32:90.25:0,90,1064	0/0:27,0:27:72.18:0,72,834	1/1:2,24:26:32.87:601,33,0	1/1:2,14:16:42.07:406,42,0	1/1:1,40:41:99:1078,114,0	1/1:3,17:22:49.14:447,49,0	0/0:20,0:20:54.17:0,54,649	0/0:26,0:26:78.22:0,78,920	0/0:16,0:16:48.15:0,48,580	0/0:24,0:24:66.20:0,66,788	1/1:4,26:30:80.99:762,81,0	1/1:3,32:36:93.10:887,93,0	1/1:0,19:19:50.98:479,51,0
chr10	78142368	.	C	CTAGTAG	7414.07	PASS	AB=0.801;AC=16;AF=0.286;AN=56;BaseQRankSum=4.419;DP=788;FS=6.454;HRun=0;HaplotypeScore=175.9716;InbreedingCoeff=0.6674;MQ=83.01;MQ0=1;MQRankSum=-9.498;QD=25.57;ReadPosRankSum=-2.195;VQSLOD=3.8197;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:63.19:0,63,1258	0/0:11,0:11:33.07:0,33,587	0/1:49,0:49:43.04:43,0,803	0/1:27,0:28:15.34:15,0,309	0/0:26,0:26:63.22:0,63,1338	0/0:38,0:38:99:0,102,2129	0/0:24,0:24:63.20:0,63,1255	1/1:47,0:47:96.13:1392,96,0	0/0:34,0:35:65.57:0,66,1583	0/0:32,0:32:72.25:0,72,1528	0/0:25,0:25:66.21:0,66,1345	0/0:25,0:25:57.18:0,57,1143	0/0:34,0:34:75.26:0,75,1578	0/0:24,0:24:57.18:0,57,1170	0/0:29,0:29:66.23:0,66,1371	0/0:35,0:34:87.30:0,87,1833	0/0:18,0:17:45.12:0,45,891	0/1:7,0:17:54.98:157,0,55	1/1:4,9:14:33.06:974,33,0	1/1:9,24:35:60.21:1984,60,0	1/1:10,6:20:12.04:396,12,0	0/0:24,0:24:48.13:0,48,928	0/0:38,0:38:81.26:0,81,1666	0/0:19,0:19:45.14:0,45,916	0/0:36,0:36:93.31:0,93,1933	0/1:12,0:29:5.67:288,0,6	1/1:9,18:28:63.16:1983,63,0	1/1:8,0:21:29.40:180,29,0
chr10	78142386	.	GTATCAT	G	1160.74	PASS	AB=0.942;AC=5;AF=0.089;AN=56;BaseQRankSum=4.266;DP=771;FS=3.745;HRun=0;HaplotypeScore=185.4721;InbreedingCoeff=-0.1016;MQ=75.80;MQ0=1;MQRankSum=-4.867;QD=8.66;ReadPosRankSum=-4.277;VQSLOD=1.5459;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:78.27:0,78,2642	0/0:12,0:12:36.12:0,36,1282	0/0:39,0:38:99:0,102,2884	0/0:27,0:27:69.50:0,69,1615	0/0:31,0:31:93.32:0,93,2984	0/0:40,0:40:99:0,120,3965	0/0:25,0:25:75.26:0,75,2320	0/1:29,20:49:99:1101,0,2438	0/0:37,0:37:99:0,105,3444	0/0:34,0:34:99:0,99,3290	0/0:23,0:23:69.22:0,69,2137	0/0:24,0:24:66.22:0,66,2233	0/0:28,0:28:84.29:0,84,2854	0/0:22,0:22:66.23:0,66,2186	0/0:30,0:30:87.30:0,87,2755	0/0:36,0:36:99:0,105,3511	0/0:20,0:19:57.20:0,57,1797	0/1:15,0:15:17.34:17,0,984	0/1:17,0:17:20.97:21,0,1230	0/1:29,0:29:99:109,0,1608	0/1:24,0:24:29.14:29,0,608	0/0:24,0:24:72.25:0,72,2289	0/0:36,0:36:99:0,105,3424	0/0:20,0:20:57.20:0,57,2004	0/0:33,0:33:99:0,99,3338	0/0:28,0:28:80.52:0,81,2247	0/0:28,0:27:6.32:0,6,1769	0/0:13,0:14:30.10:0,30,816
chr10	78143489	.	CTATA	C	1285.82	PASS	AC=22;AF=0.478;AN=46;BaseQRankSum=-1.481;DP=214;FS=1.912;HRun=0;HaplotypeScore=45.0992;InbreedingCoeff=0.6218;MQ=63.39;MQ0=2;MQRankSum=1.909;QD=16.48;ReadPosRankSum=4.258;VQSLOD=3.1028;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:18.06:0,18,434	0/0:0,0:1:0:0,0,0	1/1:3,0:1:1.55:4,2,0	0/0:13,0:6:11.40:0,11,105	./.	1/1:7,12:19:6.12:419,6,0	1/1:6,1:7:3.01:50,3,0	0/0:24,0:31:43.36:0,43,743	./.	0/0:9,0:9:8.98:0,9,118	./.	1/1:1,3:4:6.02:99,6,0	1/1:0,3:3:9.03:149,9,0	./.	0/0:5,0:5:3.01:0,3,71	1/1:1,2:3:6.02:99,6,0	1/1:8,9:18:21.07:326,21,0	0/0:9,0:13:8.99:0,9,125	0/0:13,0:16:18.06:0,18,344	0/0:5,0:6:6.02:0,6,105	./.	1/1:3,1:4:3.01:50,3,0	1/1:3,2:5:3.01:50,3,0	1/1:1,1:2:3.01:50,3,0	1/1:4,6:9:8.76:148,9,0	0/0:5,0:5:3:0,3,26	0/0:6,0:9:9.03:0,9,158	0/0:4,0:6:6.02:0,6,109
chr10	78144442	.	T	TC	2086.23	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-2.403;DP=533;FS=0.444;HRun=8;HaplotypeScore=58.7540;InbreedingCoeff=0.9662;MQ=80.81;MQ0=0;MQRankSum=-1.249;QD=15.34;ReadPosRankSum=-2.043;VQSLOD=3.1389;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:69.01:0,69,631	0/0:10,0:9:24.01:0,24,220	0/0:17,0:17:41.69:0,42,354	0/0:11,0:12:13.43:0,13,115	0/0:22,0:22:54:0,54,489	0/0:17,0:18:50.06:0,50,445	0/0:22,0:23:53.05:0,53,473	1/1:8,13:21:36.11:415,36,0	0/0:11,0:11:27:0,27,247	0/0:23,1:24:31.42:0,31,542	0/0:18,0:18:45.02:0,45,411	0/0:19,0:19:42:0,42,384	0/0:27,0:27:66.02:0,66,604	0/0:26,0:26:65.86:0,66,603	0/0:19,0:19:54.01:0,54,490	0/0:26,0:26:56.98:0,57,512	0/0:24,0:24:66.03:0,66,604	1/1:4,4:8:3.48:35,3,0	1/1:6,2:15:22.85:127,23,0	1/1:4,1:14:22.98:126,23,0	1/1:3,0:15:19.92:101,20,0	0/0:16,0:16:42.01:0,42,384	0/0:21,0:21:42:0,42,384	0/0:16,0:16:39.01:0,39,357	0/0:20,0:20:57.03:0,57,522	1/1:6,18:24:54.12:600,54,0	1/1:1,4:15:29.08:225,29,0	1/1:1,22:23:57.17:658,57,0
chr10	78145211	.	CG	C	3648.97	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=9.098;DP=543;FS=7.135;HRun=7;HaplotypeScore=56.0504;InbreedingCoeff=0.9932;MQ=92.82;MQ0=0;MQRankSum=-2.076;QD=23.85;ReadPosRankSum=0.703;VQSLOD=3.7962;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:34:53.58:0,54,942	0/0:14,0:14:33.11:0,33,415	0/0:25,0:25:57.16:0,57,678	0/0:26,0:26:65.25:0,65,672	0/0:19,0:19:48.08:0,48,566	0/0:18,0:18:45.13:0,45,554	0/0:27,0:27:77.82:0,78,940	1/1:4,12:16:30.06:304,30,0	0/0:18,0:18:54.17:0,54,668	0/0:12,0:12:30.10:0,30,377	0/0:5,0:5:15.03:0,15,166	0/0:22,0:22:63.16:0,63,757	0/0:23,0:23:60.17:0,60,726	0/0:21,0:21:63.16:0,63,765	0/0:20,0:20:60.18:0,60,739	0/0:17,0:17:48.15:0,48,603	0/0:39,0:39:99:0,108,1355	1/1:3,25:28:72.16:734,72,0	1/1:5,14:19:42.03:410,42,0	1/1:1,11:12:27.05:275,27,0	1/1:5,29:34:78.17:795,78,0	0/0:10,0:10:24.08:0,24,302	0/0:10,0:10:21.07:0,21,263	0/0:15,0:15:45.09:0,45,535	0/0:15,0:15:45.11:0,45,530	1/1:3,17:20:51.11:520,51,0	1/1:1,16:17:45.10:459,45,0	1/1:2,5:7:15.03:153,15,0
chr10	78145630	.	C	CGTGT	2337.47	PASS	AB=0.807;AC=25;AF=0.481;AN=52;BaseQRankSum=-3.639;DP=755;FS=9.743;HRun=0;HaplotypeScore=131.4086;InbreedingCoeff=0.5468;MQ=63.93;MQ0=18;MQRankSum=-1.132;QD=6.42;ReadPosRankSum=-1.425;VQSLOD=1.1887;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:43:20.96:0,21,303	0/0:10,0:11:2.45:0,2,27	./.	./.	0/0:19,0:23:21.52:0,22,281	1/1:27,0:27:14.34:263,14,0	1/1:16,5:20:3.48:53,3,0	0/1:25,0:23:0:0,0,0	1/1:19,0:19:8.94:66,9,0	0/0:26,0:29:5.32:0,5,65	0/0:13,0:13:5.96:0,6,45	1/1:14,12:28:3.48:71,3,0	1/1:15,5:26:11.71:203,12,0	0/0:22,0:22:14.73:0,15,223	0/0:37,0:37:6.01:0,6,91	1/1:15,11:29:3.01:70,3,0	0/1:25,13:37:73.54:196,0,74	0/0:16,0:26:18.09:0,18,191	0/0:12,0:14:3:0,3,27	0/0:15,0:21:6.01:0,6,56	0/0:39,0:56:26.82:0,27,252	0/1:15,13:28:19.28:131,0,19	1/1:13,5:18:3.01:70,3,0	1/1:13,15:33:11.78:223,12,0	1/1:25,0:25:33.05:476,33,0	1/1:35,0:33:40.76:570,41,0	0/0:18,0:23:5.76:0,6,55	1/1:9,0:7:6.02:123,6,0
chr10	78146699	.	GA	G	860.72	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.881;DP=779;FS=0.660;HRun=6;HaplotypeScore=79.1369;InbreedingCoeff=0.9014;MQ=93.86;MQ0=0;MQRankSum=-3.723;QD=26.08;ReadPosRankSum=0.783;VQSLOD=3.8971;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,1566	0/0:15,0:15:45.11:0,45,557	0/0:40,0:39:92.88:0,93,1079	0/0:30,0:30:77.62:0,78,885	0/0:24,0:24:63.11:0,63,784	0/0:24,2:26:1.77:0,2,688	0/0:26,0:26:78.25:0,78,1019	0/0:33,0:33:87.23:0,87,1081	0/0:35,0:35:99:0,99,1247	0/0:36,0:36:99:0,102,1303	0/0:19,0:19:51.10:0,51,628	0/0:28,0:28:81.26:0,81,1042	0/0:22,0:22:66.21:0,66,848	0/0:31,0:31:90.19:0,90,1085	0/0:41,0:41:99:0,120,1536	0/0:37,0:37:99:0,108,1394	0/0:40,0:40:99:0,117,1513	0/0:5,0:24:54.23:0,54,284	0/0:20,0:20:54.09:0,54,651	0/0:28,0:28:72.23:0,72,933	0/0:35,0:35:99:0,99,1253	0/0:17,0:17:51.16:0,51,661	0/0:18,0:18:48.13:0,48,597	0/0:27,0:27:75.23:0,75,964	0/0:28,0:28:75.22:0,75,950	1/1:1,19:20:57.11:596,57,0	0/0:23,0:23:66.20:0,66,848	1/1:0,13:13:36.09:386,36,0
chr10	78150544	.	GTGTA	G	9023.47	PASS	AB=0.748;AC=33;AF=0.635;AN=52;BaseQRankSum=-6.907;DP=765;FS=0.913;HRun=0;HaplotypeScore=142.4753;InbreedingCoeff=0.7187;MQ=70.80;MQ0=5;MQRankSum=-0.516;QD=18.27;ReadPosRankSum=0.660;VQSLOD=4.6819;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:32:41.13:0,41,639	1/1:4,7:11:18.06:279,18,0	./.	./.	1/1:13,23:36:66.14:974,66,0	0/0:11,0:30:48.13:0,48,778	0/0:18,0:18:15.04:0,15,293	1/1:27,0:26:2.96:20,3,0	0/0:12,0:22:24.08:0,24,433	1/1:15,12:27:36.10:533,36,0	1/1:6,10:17:24.01:343,24,0	1/1:15,12:28:33.11:493,33,0	1/1:19,12:31:36.12:558,36,0	1/1:11,17:28:42.14:651,42,0	1/1:13,13:26:36.12:558,36,0	0/0:10,0:27:38.92:0,39,680	0/1:24,3:27:16.54:17,0,543	0/1:19,15:34:68.26:457,0,68	1/1:15,10:24:30.05:416,30,0	1/1:9,12:21:33.11:511,33,0	1/1:10,21:31:51.17:780,51,0	0/1:11,13:24:18.35:388,0,18	1/1:22,15:36:36.12:558,36,0	1/1:9,20:29:51.17:790,51,0	0/0:11,0:27:45.13:0,45,741	0/0:23,0:32:51.17:0,51,907	1/1:19,16:35:45.15:697,45,0	0/0:13,0:20:12.04:0,12,208
chr10	78151946	.	ATGTG	A	700.19	PASS	AB=0.938;AC=15;AF=0.313;AN=48;BaseQRankSum=-2.177;DP=548;FS=0.000;HRun=0;HaplotypeScore=134.4819;InbreedingCoeff=0.4290;MQ=53.13;MQ0=11;MQRankSum=-1.252;QD=3.47;ReadPosRankSum=0.439;VQSLOD=2.4975;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:44.40:0,44,791	./.	./.	./.	0/0:17,0:17:11.77:0,12,73	0/0:22,0:22:12.45:0,12,116	0/0:32,0:31:24.18:0,24,218	1/1:20,0:18:0.47:1,0,0	0/0:20,0:19:6:0,6,57	0/0:19,0:18:18.06:0,18,247	0/0:10,0:9:2.32:0,2,34	0/0:22,0:21:6:0,6,67	0/0:17,0:15:6.89:0,7,72	0/0:24,0:24:2.94:0,3,19	0/0:16,0:16:5.97:0,6,43	0/1:20,0:20:30.18:30,0,110	0/0:33,0:33:11.66:0,12,127	1/1:15,0:24:9.01:84,9,0	1/1:21,1:23:5.29:74,5,0	1/1:13,2:16:18.02:209,18,0	0/1:34,9:44:30.78:122,0,31	0/0:16,0:16:5.91:0,6,69	0/0:12,0:11:9.01:0,9,117	0/0:23,0:22:2.47:0,2,70	0/1:18,0:18:21.30:21,0,150	1/1:16,0:20:14.50:117,15,0	1/1:11,5:17:15.04:197,15,0	./.
chr10	78151947	.	T	TGTGTGTGTGC	2774.20	PASS	AB=1.000;AC=27;AF=0.500;AN=54;BaseQRankSum=5.384;DP=576;FS=0.000;HRun=0;HaplotypeScore=181.2488;InbreedingCoeff=0.5454;MQ=52.99;MQ0=11;MQRankSum=0.206;QD=8.59;ReadPosRankSum=0.220;VQSLOD=2.2597;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:60.07:0,60,1170	1/1:6,0:6:2.94:18,3,0	./.	0/0:13,0:2:2.60:0,3,10	0/1:17,0:17:0.08:1,0,0	0/0:26,0:25:0.89:0,1,2	1/1:32,0:31:51.89:568,52,0	0/1:21,0:19:3.38:3,0,255	1/1:5,14:19:3.01:132,3,0	1/1:19,0:18:38.61:430,39,0	0/1:11,0:10:17.69:18,0,19	1/1:9,15:29:3.48:153,3,0	1/1:20,0:18:23.16:189,23,0	0/1:24,0:24:0.02:1,0,0	1/1:18,0:18:3.44:21,3,0	1/1:7,12:24:13.59:394,14,0	1/1:33,0:33:71.42:643,71,0	0/0:24,0:24:47.49:0,47,535	0/0:23,0:23:47.95:0,48,443	0/0:15,0:15:33.87:0,34,409	0/0:44,0:44:75.54:0,76,783	0/1:18,0:17:28.02:56,0,28	1/1:12,0:11:3.01:96,3,0	0/0:8,15:29:0.68:0,1,3	1/1:18,0:18:19.75:227,20,0	0/0:19,0:19:16.29:0,16,283	0/0:17,0:17:42.94:0,43,464	0/0:9,0:6:11.96:0,12,94
chr10	78151949	.	T	TGTGTGTGC	2430.61	PASS	AB=0.791;AC=28;AF=0.519;AN=54;BaseQRankSum=6.471;DP=564;FS=1.638;HRun=0;HaplotypeScore=161.6962;InbreedingCoeff=0.4399;MQ=52.53;MQ0=12;MQRankSum=0.566;QD=7.02;ReadPosRankSum=-0.353;VQSLOD=2.5685;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:60.07:0,60,1086	1/1:5,0:5:2.94:18,3,0	./.	0/0:13,0:2:2.60:0,3,10	1/1:16,1:17:0.47:1,0,0	0/1:7,18:26:0.06:0,0,21	1/1:31,0:30:46.87:394,47,0	0/1:20,0:18:0.11:0,0,270	1/1:17,0:16:3.01:87,3,0	1/1:17,0:16:38.61:430,39,0	0/1:2,7:11:6.37:42,0,6	0/1:29,0:28:38.47:98,0,38	1/1:21,0:19:1.95:141,2,0	1/1:27,0:27:5.99:51,6,0	1/1:2,16:18:3.48:34,3,0	1/1:23,0:23:15.41:363,15,0	1/1:32,0:32:67.69:532,68,0	0/0:22,0:22:44.89:0,45,429	0/0:20,0:20:52.83:0,53,458	0/0:16,0:16:32.99:0,33,376	0/0:44,0:44:54.58:0,55,699	0/1:17,0:16:14.20:14,0,17	0/1:6,6:14:15.92:141,0,16	0/0:26,1:26:2.37:0,2,30	1/1:18,0:18:19.78:259,20,0	0/0:16,0:16:10.61:0,11,292	0/0:17,0:17:16.91:0,17,394	0/0:9,0:6:11.96:0,12,94
chr10	78151951	.	T	TGTGTGC	2254.12	PASS	AB=0.921;AC=21;AF=0.389;AN=54;BaseQRankSum=6.342;DP=560;FS=0.000;HRun=0;HaplotypeScore=150.9450;InbreedingCoeff=0.1374;MQ=52.12;MQ0=12;MQRankSum=-0.099;QD=7.07;ReadPosRankSum=1.198;VQSLOD=2.6190;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:60.07:0,60,955	1/1:5,0:5:2.94:18,3,0	./.	0/0:13,0:2:2.60:0,3,10	0/1:6,8:17:0.21:1,0,0	0/1:27,0:26:15.03:15,0,18	1/1:32,0:31:34.36:369,34,0	0/1:20,0:18:0.19:0,0,276	0/1:17,0:16:15.88:45,0,16	1/1:17,0:16:38.64:430,39,0	0/0:11,0:10:1.75:0,2,23	0/1:29,0:28:38.40:79,0,38	0/1:20,0:18:19.03:138,0,19	0/0:8,19:31:11.62:0,12,85	0/1:17,0:17:12.35:42,0,12	0/1:21,1:22:28.87:312,0,29	1/1:32,0:32:56.03:600,56,0	0/0:22,0:22:47.87:0,48,436	0/0:17,0:17:50.59:0,51,431	0/0:16,0:16:6.07:0,6,330	0/0:47,0:47:82.17:0,82,740	0/1:4,9:15:7.70:10,0,8	0/1:13,0:12:15.37:98,0,15	0/0:26,0:25:2.94:0,3,52	1/1:19,0:19:19.72:218,20,0	0/1:16,0:16:47.72:48,0,254	0/0:17,0:17:38.41:0,38,371	0/0:9,0:6:11.96:0,12,94
chr10	78151955	.	T	TGC	1410.80	PASS	AB=0.988;AC=16;AF=0.296;AN=54;BaseQRankSum=7.563;DP=570;FS=0.000;HRun=0;HaplotypeScore=122.8637;InbreedingCoeff=0.0354;MQ=51.42;MQ0=13;MQRankSum=-0.037;QD=5.28;ReadPosRankSum=1.219;VQSLOD=3.1532;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:59.91:0,60,675	1/1:4,0:4:2.94:18,3,0	./.	0/0:18,0:6:8.58:0,9,72	0/1:18,0:18:12.96:13,0,14	0/1:27,0:26:14.36:23,0,14	0/1:33,0:32:73.16:323,0,73	0/0:19,0:17:43.43:0,43,350	0/0:16,1:16:2.10:0,2,67	1/1:16,0:15:38.61:364,39,0	0/0:11,0:10:5.83:0,6,39	0/1:28,1:28:25.61:26,0,60	0/1:18,1:17:20.54:139,0,21	0/0:29,0:29:10.55:0,11,117	1/1:17,0:17:5.75:47,6,0	0/1:22,1:23:66.47:70,0,66	0/1:34,0:34:5.03:339,0,5	0/0:23,0:23:49.30:0,49,365	0/0:18,0:18:53.63:0,54,414	0/0:16,0:16:38.68:0,39,297	0/0:49,0:48:96.98:0,97,757	0/1:16,0:15:24.59:25,0,33	0/1:12,0:11:13.96:36,0,14	0/0:23,0:22:5.66:0,6,68	0/1:19,0:19:28.47:149,0,28	0/0:16,0:16:22.93:0,23,281	0/0:18,0:18:44.31:0,44,321	0/0:10,0:7:17.95:0,18,142
chr10	78152943	.	TCCCTCCCTCCCTCC	T	2214.89	PASS	AB=0.994;AC=32;AF=0.640;AN=50;BaseQRankSum=-6.213;DP=314;FS=20.766;HRun=0;HaplotypeScore=100.1478;InbreedingCoeff=-0.2028;MQ=33.58;MQ0=21;MQRankSum=5.396;QD=9.19;ReadPosRankSum=3.673;VQSLOD=-0.3755;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:8:6:0,6,127	./.	./.	0/0:19,0:5:3.26:0,3,9	1/1:5,0:4:3:25,3,0	0/1:7,0:7:35.72:36,0,43	1/1:9,0:6:5.98:82,6,0	1/1:4,22:24:66.08:866,66,0	0/1:15,0:13:14.66:15,0,83	0/1:7,0:7:99:124,0,124	1/1:9,0:8:0.89:34,1,0	0/1:13,0:12:20.07:20,0,90	1/1:8,0:7:0.74:2,1,0	0/1:20,0:18:5.39:5,0,177	0/1:14,0:13:31.77:69,0,32	0/1:12,0:11:50.58:92,0,51	0/1:11,0:11:85.96:90,0,86	1/1:7,0:4:6.02:109,6,0	1/1:9,0:6:13.43:69,13,0	0/1:13,0:12:15.24:29,0,15	1/1:3,0:2:2.97:20,3,0	0/0:10,6:15:12.65:0,13,63	./.	1/1:11,0:10:2.59:48,3,0	0/1:11,0:11:32.87:33,0,70	0/1:10,0:9:99:185,0,208	1/1:15,0:15:28.71:355,29,0	0/1:5,0:5:54.03:54,0,140
chr10	78156080	.	CTCTCT	C	1747.38	PASS	AB=0.966;AC=17;AF=0.327;AN=52;BaseQRankSum=0.570;DP=623;FS=9.716;HRun=0;HaplotypeScore=196.2838;InbreedingCoeff=0.2025;MQ=38.08;MQ0=46;MQRankSum=-8.135;QD=6.50;ReadPosRankSum=-2.993;VQSLOD=1.2665;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:48:94.02:0,94,2055	0/1:9,0:8:46.15:46,0,74	./.	0/0:38,0:4:12.04:0,12,154	0/0:19,4:20:17.01:0,17,187	0/1:22,0:17:17.98:18,0,211	0/1:18,3:21:50.24:50,0,221	1/1:32,0:28:63.09:676,63,0	0/0:22,2:20:27.90:0,28,340	0/1:17,0:16:59.60:60,0,423	0/0:11,0:10:10.34:0,10,98	0/1:18,0:16:47.01:47,0,123	0/0:17,2:17:10.16:0,10,279	0/0:24,0:24:16.38:0,16,539	0/0:26,0:25:13.24:0,13,392	0/1:17,3:19:1.63:2,0,375	0/0:22,0:21:35.01:0,35,433	1/1:14,0:13:9.42:116,9,0	1/1:24,0:24:37.16:550,37,0	0/0:32,0:29:2.04:0,2,6	./.	0/0:16,3:17:13.44:0,13,104	0/0:13,1:12:15.99:0,16,214	0/1:28,0:21:0:0,0,166	0/1:17,1:15:14.90:15,0,213	0/1:26,0:25:58.43:181,0,58	1/1:18,0:16:17.85:152,18,0	0/0:7,0:7:3.89:0,4,91
chr10	78156082	.	CTCT	C	2100.24	PASS	AB=0.994;AC=18;AF=0.333;AN=54;BaseQRankSum=0.235;DP=607;FS=6.269;HRun=0;HaplotypeScore=179.5927;InbreedingCoeff=0.1832;MQ=37.69;MQ0=48;MQRankSum=-8.571;QD=7.42;ReadPosRankSum=-1.215;VQSLOD=2.1700;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:46:93.64:0,94,1598	0/1:9,0:8:40.87:41,0,55	./.	0/0:37,0:4:12.04:0,12,158	0/0:23,0:20:16.68:0,17,165	0/1:22,0:17:16.28:16,0,209	0/1:21,0:21:49.18:49,0,221	1/1:31,0:27:68.91:757,69,0	0/0:22,2:20:27.43:0,27,298	0/1:15,1:15:67.04:67,0,375	0/0:10,1:10:9.93:0,10,94	0/1:18,0:16:63.18:63,0,114	0/0:19,0:17:4.15:0,4,285	0/0:24,0:24:15.90:0,16,527	0/0:22,0:21:9.73:0,10,337	0/1:18,0:17:8.90:9,0,312	0/0:25,0:21:38.28:0,38,413	1/1:14,1:13:20.46:164,20,0	1/1:21,0:21:55.98:679,56,0	0/0:31,0:28:2.04:0,2,6	0/1:21,0:17:0:0,0,0	0/0:20,0:17:13.38:0,13,104	0/0:14,0:12:15.99:0,16,187	0/1:28,0:21:1.85:2,0,166	0/1:18,0:15:18.45:18,0,207	0/1:27,0:24:15.26:232,0,15	1/1:18,0:16:17.87:171,18,0	0/0:7,0:7:3.89:0,4,69
chr10	78156084	.	CT	C	2481.47	PASS	AB=0.824;AC=20;AF=0.370;AN=54;BaseQRankSum=0.631;DP=598;FS=7.156;HRun=2;HaplotypeScore=164.8577;InbreedingCoeff=0.1096;MQ=37.40;MQ0=48;MQRankSum=-8.295;QD=7.80;ReadPosRankSum=-0.063;VQSLOD=0.5939;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:45:93.15:0,93,1236	0/1:5,4:8:35.56:48,0,36	./.	0/0:37,0:4:12.04:0,12,158	0/0:18,5:20:16.35:0,16,161	0/1:19,4:18:32.02:32,0,185	0/1:19,2:20:45.59:46,0,221	1/1:10,20:27:69.04:835,69,0	0/0:19,5:20:26.95:0,27,274	0/1:13,2:14:70.93:71,0,315	0/0:8,2:9:8.99:0,9,93	0/1:10,8:16:61.26:61,0,110	0/1:16,3:17:8.63:9,0,266	0/0:21,3:24:15.93:0,16,511	0/1:14,5:18:5.07:5,0,282	0/1:15,3:17:21.41:21,0,209	0/0:17,8:21:39.86:0,40,424	1/1:13,2:13:20.86:189,21,0	1/1:20,1:21:57.17:711,57,0	0/0:25,5:27:2.04:0,2,6	0/1:19,1:16:0:0,0,0	0/0:17,3:17:11.84:0,12,102	0/0:12,2:12:15.38:0,15,161	0/1:20,7:20:17.50:17,0,165	0/1:13,5:15:49.78:50,0,206	0/1:21,6:24:0.89:377,0,1	1/1:13,5:16:17.88:180,18,0	0/0:7,0:7:3.65:0,4,48
chr10	78156085	.	T	TC	2814.25	PASS	AB=0.937;AC=22;AF=0.423;AN=52;BaseQRankSum=1.215;DP=607;FS=3.493;HRun=1;HaplotypeScore=172.4403;InbreedingCoeff=0.0544;MQ=36.97;MQ0=50;MQRankSum=-8.789;QD=8.40;ReadPosRankSum=0.439;VQSLOD=1.1083;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:44:93.15:0,93,1185	0/1:11,0:10:17.08:53,0,17	./.	0/0:37,0:4:12.04:0,12,158	0/0:24,0:21:16.35:0,16,157	0/1:23,0:18:45.58:46,0,167	0/1:23,0:22:75.45:75,0,219	1/1:24,1:23:69:795,69,0	0/0:23,1:20:26.13:0,26,250	0/1:18,0:16:99:156,0,277	0/0:10,0:9:8.98:0,9,92	0/1:18,0:16:49.62:50,0,110	0/1:19,1:17:20.46:20,0,258	0/0:24,0:24:15.74:0,16,500	0/1:19,1:19:5.77:6,0,275	0/1:17,1:17:42.71:43,0,153	0/0:24,1:21:40.27:0,40,423	1/1:6,0:13:21.02:197,21,0	1/1:3,19:22:60.06:766,60,0	./.	0/1:5,15:16:0:0,0,0	0/0:15,6:18:11.90:0,12,101	0/0:13,1:12:8.14:0,8,140	0/1:22,4:19:17.55:18,0,164	0/1:18,1:16:49.79:50,0,206	1/1:20,6:23:0.92:459,1,0	1/1:7,13:18:20.81:218,21,0	0/1:10,0:10:30.42:30,0,34
chr10	78156108	.	TCACACACACACACACACA	T	1755.32	PASS	AB=0.903;AC=11;AF=0.212;AN=52;BaseQRankSum=5.673;DP=496;FS=3.119;HRun=0;HaplotypeScore=245.4935;InbreedingCoeff=0.5038;MQ=34.75;MQ0=39;MQRankSum=-5.443;QD=19.29;ReadPosRankSum=-0.674;VQSLOD=2.5642;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:43:50.08:0,50,2986	0/0:11,0:10:6.91:0,7,455	./.	./.	0/0:28,0:24:2.33:0,2,1096	0/0:24,0:19:5.21:0,5,1293	0/0:25,0:24:24.08:0,24,1374	0/0:27,0:21:17.60:0,18,106	0/0:23,0:20:8.78:0,9,714	0/0:16,0:13:24.08:0,24,1657	0/1:9,0:8:0:0,0,0	0/0:19,0:17:11.87:0,12,924	0/0:18,0:16:15.41:0,15,1091	0/0:17,0:17:15.05:0,15,1104	0/0:17,0:16:2.80:0,3,401	0/1:16,0:15:0.38:0,0,475	0/0:30,0:25:27.04:0,27,1679	0/0:9,0:7:1.25:0,1,3	1/1:9,2:11:5.96:290,6,0	1/1:9,5:14:6.02:273,6,0	0/0:12,0:9:0.47:0,0,1	0/0:26,0:23:12.77:0,13,1459	0/0:16,0:14:9.50:0,10,733	0/0:24,0:17:5.35:0,5,444	0/0:15,0:12:14.78:0,15,1041	0/1:13,0:20:68.45:505,0,68	1/1:10,3:14:14.82:630,15,0	1/1:2,0:4:6.02:191,6,0
chr10	78156525	.	GTGTGTA	G	4821.72	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-7.770;DP=676;FS=6.405;HRun=0;HaplotypeScore=138.6950;InbreedingCoeff=0.0499;MQ=67.66;MQ0=16;MQRankSum=-3.630;QD=9.47;ReadPosRankSum=1.315;VQSLOD=3.5569;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,111,1828	1/1:12,0:12:11.14:60,11,0	0/0:53,0:26:41.11:0,41,431	0/0:42,0:20:27:0,27,393	1/1:12,2:14:14.44:177,14,0	0/1:31,0:31:99:133,0,528	0/1:17,0:17:99:149,0,164	1/1:18,0:16:38.99:344,39,0	0/1:25,0:25:99:170,0,283	1/1:34,0:33:65.24:565,65,0	1/1:8,2:10:2.90:117,3,0	0/1:20,0:20:99:133,0,224	0/1:17,0:17:99:176,0,130	1/1:12,2:14:34.12:319,34,0	1/1:25,1:25:5.25:25,5,0	0/1:22,0:21:51.90:52,0,424	0/1:35,0:35:99:284,0,504	0/0:20,0:19:5.79:0,6,38	1/1:11,0:10:29.71:224,30,0	1/1:12,0:12:20.37:197,20,0	1/1:43,0:43:73.42:708,73,0	0/1:20,0:20:99:103,0,253	0/1:23,0:23:77.79:78,0,359	0/1:46,0:45:99:151,0,499	0/1:19,0:19:40.80:41,0,376	1/1:19,0:19:25.83:282,26,0	1/1:11,0:11:5.19:147,5,0	1/1:10,0:9:20.62:187,21,0
chr10	78156527	.	GTGTA	G	6610.81	PASS	AB=0.990;AC=39;AF=0.696;AN=56;BaseQRankSum=-5.230;DP=687;FS=6.981;HRun=0;HaplotypeScore=114.5691;InbreedingCoeff=0.0565;MQ=65.39;MQ0=18;MQRankSum=-3.357;QD=12.17;ReadPosRankSum=0.798;VQSLOD=3.7676;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:78.65:0,79,1353	1/1:0,12:12:11.47:148,11,0	0/0:51,0:24:41.11:0,41,431	0/0:41,0:19:27:0,27,393	1/1:17,0:17:39.32:328,39,0	0/1:32,0:32:99:146,0,201	0/1:17,1:18:49.56:284,0,50	1/1:17,0:15:38.99:344,39,0	0/1:25,0:25:40.25:302,0,40	1/1:2,33:33:82.55:656,83,0	1/1:12,1:13:29.83:273,30,0	0/1:21,0:21:68.53:186,0,69	0/1:18,0:18:3.60:205,0,4	1/1:15,1:16:40.87:316,41,0	1/1:2,22:23:5.81:113,6,0	0/1:21,0:20:99:110,0,156	0/1:33,2:35:99:381,0,171	1/1:23,0:22:2.90:11,3,0	1/1:12,0:11:32.73:245,33,0	1/1:10,1:11:20.58:209,21,0	1/1:43,2:44:99:953,105,0	0/1:18,0:18:51.06:247,0,51	0/1:23,0:23:99:114,0,127	0/1:47,0:46:99:234,0,187	0/1:18,0:18:44.95:45,0,211	1/1:22,0:22:53.49:402,53,0	1/1:10,0:10:23.93:189,24,0	1/1:10,0:9:22.60:168,23,0
chr10	78156529	.	GTA	G	8028.69	PASS	AB=0.926;AC=47;AF=0.839;AN=56;BaseQRankSum=-2.763;DP=673;FS=1.392;HRun=0;HaplotypeScore=89.6127;InbreedingCoeff=0.5458;MQ=61.94;MQ0=18;MQRankSum=-1.804;QD=15.03;ReadPosRankSum=-0.390;VQSLOD=4.5506;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:62.95:0,63,952	1/1:12,0:12:11.57:84,12,0	0/0:47,0:20:41.11:0,41,431	0/0:40,0:18:27.02:0,27,393	1/1:18,0:18:38.74:304,39,0	1/1:31,3:34:17.24:415,17,0	1/1:18,0:18:10.28:284,10,0	1/1:16,0:14:38.99:344,39,0	1/1:24,1:25:39.22:449,39,0	1/1:35,0:33:82.55:625,83,0	1/1:14,0:14:29.80:241,30,0	1/1:20,1:21:11.60:306,12,0	1/1:18,0:18:44.70:342,45,0	1/1:16,0:16:40.85:302,41,0	1/1:24,0:23:5.89:49,6,0	0/1:19,2:20:12.96:285,0,13	1/1:35,0:35:33.60:578,34,0	1/1:0,20:20:5.85:91,6,0	1/1:12,0:11:32.76:247,33,0	1/1:10,0:10:20.50:175,20,0	1/1:45,0:44:99:882,108,0	1/1:18,0:18:33.67:373,34,0	0/1:21,2:23:10.72:279,0,11	1/1:40,1:40:10.85:432,11,0	0/1:16,1:17:55.20:137,0,55	1/1:20,0:20:56.34:424,56,0	1/1:11,0:11:26.92:212,27,0	1/1:10,0:9:22.68:169,23,0
chr10	78157512	.	A	AG	527.68	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.050;DP=516;FS=3.553;HRun=0;HaplotypeScore=50.0606;InbreedingCoeff=0.9921;MQ=77.50;MQ0=0;MQRankSum=-2.535;QD=32.98;ReadPosRankSum=2.011;VQSLOD=3.3152;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.19:0,63,847	0/0:11,0:11:27.09:0,27,378	0/0:15,0:14:42.14:0,42,567	0/0:10,0:10:21.53:0,22,263	0/0:27,0:27:81.27:0,81,1133	0/0:22,0:22:66.21:0,66,905	0/0:14,0:14:42.14:0,42,587	0/0:36,0:36:99:0,108,1495	0/0:15,0:15:45.14:0,45,613	0/0:27,0:27:81.26:0,81,1105	0/0:20,0:20:54.15:0,54,720	0/0:20,0:20:60.20:0,60,833	0/0:16,0:16:42.14:0,42,587	0/0:15,0:15:42.13:0,42,570	0/0:17,0:17:51.16:0,51,698	0/0:17,0:17:51.17:0,51,713	0/0:20,0:20:57.16:0,57,762	1/1:0,16:16:42.14:623,42,0	0/0:18,0:18:54.18:0,54,755	0/0:32,0:32:96.31:0,96,1326	0/0:14,0:14:42.14:0,42,587	0/0:9,0:9:27.09:0,27,378	0/0:21,0:21:63.21:0,63,881	0/0:14,0:14:39.13:0,39,544	0/0:19,0:19:57.19:0,57,797	0/0:18,0:18:54.18:0,54,755	0/0:23,0:23:69.23:0,69,965	0/0:8,0:8:24.08:0,24,336
chr10	78157563	.	A	ACACC	716.95	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.715;DP=562;FS=1.183;HRun=0;HaplotypeScore=92.8915;InbreedingCoeff=0.9988;MQ=83.98;MQ0=0;MQRankSum=-4.774;QD=44.81;ReadPosRankSum=-0.064;VQSLOD=3.7679;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.15:0,57,986	0/0:15,0:15:45.15:0,45,828	0/0:18,0:18:51.13:0,51,876	0/0:20,0:20:46.35:0,46,657	0/0:23,0:23:69.24:0,69,1264	0/0:15,0:15:45.15:0,45,828	0/0:21,0:21:57.18:0,57,1018	0/0:41,0:41:99:0,108,1984	0/0:12,0:12:36.12:0,36,656	0/0:23,0:23:69.24:0,69,1266	0/0:17,0:17:45.15:0,45,817	0/0:23,0:23:69.22:0,69,1211	0/0:14,0:14:42.14:0,42,749	0/0:25,0:25:69.22:0,69,1232	0/0:17,0:17:48.16:0,48,883	0/0:23,0:23:69.24:0,69,1270	0/0:20,0:20:60.18:0,60,1071	1/1:5,10:16:33.07:812,33,0	0/0:16,0:16:36.12:0,36,655	0/0:29,0:29:78.27:0,78,1431	0/0:18,0:18:51.17:0,51,938	0/0:10,0:10:30.10:0,30,546	0/0:22,0:22:66.21:0,66,1178	0/0:16,0:16:45.15:0,45,820	0/0:29,0:29:87.26:0,87,1566	0/0:23,0:23:66.23:0,66,1210	0/0:18,0:18:45.14:0,45,797	0/0:16,0:16:48.12:0,48,848
chr10	78157645	.	CT	C	2186.55	PASS	AB=0.900;AC=11;AF=0.196;AN=56;BaseQRankSum=7.194;DP=490;FS=0.000;HRun=10;HaplotypeScore=53.7922;InbreedingCoeff=0.8995;MQ=77.54;MQ0=0;MQRankSum=0.293;QD=18.07;ReadPosRankSum=-0.691;VQSLOD=3.8514;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.16:0,60,664	0/0:10,0:10:27.05:0,27,287	0/0:18,0:16:25.54:0,26,238	0/0:16,0:15:24.32:0,24,209	0/0:24,0:24:43.57:0,44,624	0/0:18,0:18:48.13:0,48,531	0/0:12,0:12:30.06:0,30,320	1/1:7,25:32:71.93:617,72,0	0/0:12,0:12:36.10:0,36,398	0/0:14,0:14:35.31:0,35,372	0/0:13,0:13:33.02:0,33,350	0/0:19,0:19:54.12:0,54,576	0/0:11,1:12:7.02:0,7,298	0/0:18,0:18:42.06:0,42,437	0/0:17,0:17:45.11:0,45,489	0/0:12,0:12:33.06:0,33,348	0/0:15,0:15:42.11:0,42,465	0/0:27,0:27:67.42:0,67,733	1/1:1,19:20:56.98:491,57,0	1/1:3,22:25:59.96:521,60,0	1/1:0,13:13:29.99:260,30,0	0/0:10,0:10:30:0,30,308	0/0:21,0:21:54.12:0,54,580	0/0:8,0:8:15.04:0,15,166	0/0:20,0:20:57.15:0,57,630	0/0:6,0:32:74.12:0,74,408	1/1:2,20:22:53.99:469,54,0	0/1:0,1:9:3.12:3,0,78
chr10	78158490	.	TCTGAGCTTGAATACCTC	T	2653.12	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.772;DP=726;FS=8.995;HRun=0;HaplotypeScore=319.4786;InbreedingCoeff=0.9433;MQ=90.68;MQ0=0;MQRankSum=-4.628;QD=98.26;ReadPosRankSum=1.961;VQSLOD=2.1793;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,10535	0/0:11,0:11:33.11:0,33,2504	0/0:30,0:30:87.26:0,87,5163	0/0:30,0:30:87.25:0,87,4451	0/0:28,0:28:78.25:0,78,5852	0/0:26,0:26:75.23:0,75,5376	0/0:22,0:22:66.20:0,66,4333	0/0:42,0:42:99:0,120,8235	0/0:22,0:22:66.19:0,66,4819	0/0:21,0:21:57.20:0,57,4511	0/0:15,0:15:45.15:0,45,3395	0/0:22,0:22:66.21:0,66,5075	0/0:32,0:32:96.21:0,96,6898	0/0:33,0:33:99:0,99,7611	0/0:41,0:41:99:0,123,8596	0/0:23,0:23:69.24:0,69,5125	0/0:17,0:17:51.16:0,51,3729	0/0:27,0:27:75.21:0,75,5351	0/0:32,0:32:90.29:0,90,5462	0/0:32,0:32:93.30:0,93,6830	0/0:42,0:42:99:0,123,9246	0/0:18,0:18:54.14:0,54,3711	0/0:23,0:23:66.18:0,66,4483	0/0:25,0:25:72.20:0,72,5308	0/0:12,0:12:36.12:0,36,2803	1/1:0,24:24:60.18:2467,60,0	0/0:24,0:24:72.22:0,72,4783	1/1:0,3:3:6.02:298,6,0
chr10	78158907	.	GA	G	15440.80	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=15.500;DP=695;FS=17.759;HRun=6;HaplotypeScore=136.4202;InbreedingCoeff=0.9982;MQ=85.47;MQ0=0;MQRankSum=-4.094;QD=28.75;ReadPosRankSum=2.080;VQSLOD=3.1051;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,169,2138	1/1:1,13:14:39.10:419,39,0	0/0:19,0:19:51.15:0,51,646	0/0:24,0:25:54.01:0,54,656	1/1:1,19:20:51.12:548,51,0	1/1:0,26:26:78.20:838,78,0	1/1:5,15:20:42.10:451,42,0	1/1:5,37:42:99:1128,105,0	1/1:0,14:14:42.11:451,42,0	1/1:2,20:22:60.15:645,60,0	1/1:1,17:18:45.11:483,45,0	1/1:1,27:28:75.19:805,75,0	1/1:1,15:16:42.11:451,42,0	1/1:0,26:26:75.19:806,75,0	1/1:3,38:41:99:1161,108,0	1/1:0,17:17:45.11:484,45,0	1/1:0,33:33:93.23:1000,93,0	0/0:26,0:26:75.23:0,75,967	1/1:0,15:15:39.09:419,39,0	1/1:1,27:28:78.19:838,78,0	1/1:3,35:38:96.24:1032,96,0	1/1:0,17:17:51.13:548,51,0	1/1:1,19:20:54.14:580,54,0	1/1:2,32:34:93.23:1000,93,0	1/1:0,21:21:57.14:613,57,0	0/0:22,1:23:30.93:0,31,741	1/1:1,26:27:69.17:740,69,0	0/0:6,0:6:18.06:0,18,237
chr10	78159566	.	GT	G	252.16	PASS	AB=0.633;AC=2;AF=0.036;AN=56;BaseQRankSum=-6.925;DP=664;FS=0.705;HRun=16;HaplotypeScore=154.7575;InbreedingCoeff=0.1819;MQ=69.70;MQ0=3;MQRankSum=3.020;QD=5.60;ReadPosRankSum=-0.943;VQSLOD=1.0332;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,5:23:2.42:0,2,302	0/0:7,0:7:19.59:0,20,92	0/0:26,0:18:6.01:0,6,112	0/0:13,0:7:0:0,0,0	0/0:48,0:47:99:0,114,526	0/0:21,0:21:39.17:0,39,183	0/0:20,0:20:50.31:0,50,234	0/0:36,0:36:36.69:0,37,189	0/0:32,0:32:55.64:0,56,257	0/0:28,0:28:60.01:0,60,281	0/0:22,0:22:38.92:0,39,179	0/0:25,0:25:42.08:0,42,204	0/0:20,0:19:27.98:0,28,131	0/0:22,0:22:39.17:0,39,183	0/0:20,0:20:41.97:0,42,196	0/0:19,0:19:36.07:0,36,166	0/0:11,0:11:27.93:0,28,129	0/0:8,0:8:5.60:0,6,27	0/0:24,0:24:50.02:0,50,236	0/0:31,0:31:69.95:0,70,327	0/0:12,0:12:22.13:0,22,100	0/0:18,0:18:33.58:0,34,158	0/0:30,0:30:63.44:0,63,288	0/0:24,0:24:44.57:0,45,206	0/0:34,0:34:66.75:0,67,308	0/1:11,22:33:31.24:268,0,31	0/0:45,0:45:69.81:0,70,338	0/1:6,6:12:7.55:72,0,8
chr10	78159574	.	T	TTTTG	25318.25	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-11.873;DP=707;FS=0.425;HRun=0;HaplotypeScore=99.4673;InbreedingCoeff=0.8209;MQ=68.74;MQ0=4;MQRankSum=-3.560;QD=40.90;ReadPosRankSum=5.390;VQSLOD=4.7505;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.54:0,58,804	1/1:0,7:8:21.07:459,21,0	0/1:27,0:18:9.40:9,0,276	0/0:14,0:6:4.89:0,5,43	1/1:2,51:53:99:2723,132,0	1/1:0,20:21:42.14:938,42,0	1/1:1,18:20:54.13:1175,54,0	1/1:5,25:32:77.94:1497,78,0	1/1:5,22:34:42.11:1238,42,0	1/1:5,23:28:61.69:1359,62,0	1/1:1,23:25:59.71:1078,60,0	1/1:5,21:26:37.17:860,37,0	1/1:5,17:21:22.80:669,23,0	1/1:1,21:24:42.08:937,42,0	1/1:0,17:21:45.15:988,45,0	1/1:1,19:21:39:835,39,0	1/1:1,14:16:30.06:635,30,0	1/1:2,0:10:6.09:138,6,0	1/1:4,23:30:81.80:1323,82,0	1/1:2,28:31:80.99:1739,81,0	1/1:1,8:12:20.83:423,21,0	1/1:1,17:20:41.76:749,42,0	1/1:3,29:33:65.49:1417,65,0	1/1:0,24:26:47.87:1076,48,0	1/1:1,32:36:72.18:1567,72,0	0/0:36,0:36:99:0,102,1249	1/1:4,35:42:50.82:1486,51,0	0/0:16,0:16:42.02:0,42,443
chr10	78159889	.	GTA	G	7776.50	PASS	AB=0.978;AC=27;AF=0.482;AN=56;BaseQRankSum=-9.473;DP=879;FS=3.062;HRun=0;HaplotypeScore=184.5126;InbreedingCoeff=0.0486;MQ=59.58;MQ0=5;MQRankSum=0.743;QD=12.34;ReadPosRankSum=-2.768;VQSLOD=4.4696;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:69.08:0,69,1518	0/0:4,0:4:11.99:0,12,106	0/0:47,0:36:54.32:0,54,1505	0/0:38,0:26:63.99:0,64,1057	0/0:36,0:35:92.77:0,93,780	0/1:25,1:25:48.38:48,0,398	0/1:27,0:27:32.14:32,0,330	1/1:3,45:48:99:1663,110,0	0/1:39,1:40:27.54:28,0,677	0/1:26,2:28:99:124,0,343	0/0:25,0:25:20.39:0,20,484	0/1:31,1:32:57.82:58,0,533	0/1:35,1:36:46.39:46,0,596	0/1:29,1:30:17.52:18,0,479	0/1:31,1:32:30.39:30,0,552	0/0:34,1:35:28.89:0,29,682	0/1:30,0:30:60.96:61,0,393	1/1:10,12:22:50.67:585,51,0	1/1:4,16:17:45.15:684,45,0	1/1:0,32:32:66.22:1007,66,0	1/1:3,45:48:67.19:1456,67,0	0/0:24,1:25:2.03:0,2,472	0/1:27,1:28:40.29:40,0,503	0/1:37,0:37:17.38:17,0,605	0/1:27,0:27:16.94:17,0,494	1/1:33,0:32:25.49:277,25,0	1/1:0,41:40:96.33:1462,96,0	0/1:13,0:13:10.38:123,0,10
chr10	78159891	.	ATG	A	4281.38	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=1.589;DP=889;FS=0.303;HRun=0;HaplotypeScore=203.0488;InbreedingCoeff=0.9142;MQ=59.54;MQ0=5;MQRankSum=0.186;QD=16.28;ReadPosRankSum=2.522;VQSLOD=4.8667;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:87.59:0,88,1401	0/0:4,0:4:12.04:0,12,196	0/0:47,0:36:86.05:0,86,1285	0/0:37,0:26:51.16:0,51,828	0/0:37,0:36:96.30:0,96,1523	0/0:27,0:26:44.32:0,44,949	0/0:27,0:27:54.12:0,54,829	1/1:48,0:48:26.17:513,26,0	0/0:40,0:40:76.92:0,77,1576	0/0:28,0:28:31.29:0,31,954	0/0:24,0:24:66.21:0,66,1037	0/0:32,0:32:60.35:0,60,1226	0/0:37,0:37:71.86:0,72,1347	0/0:30,0:30:57.34:0,57,1144	0/0:33,0:33:66.35:0,66,1298	0/0:35,0:35:78.41:0,78,1518	0/0:31,0:31:60.12:0,60,921	0/1:23,0:23:7.35:192,0,7	1/1:19,0:17:44.42:294,44,0	1/1:32,0:32:65.66:497,66,0	1/1:51,0:51:13.65:605,14,0	0/0:25,0:25:46.37:0,46,1040	0/0:27,0:27:50.35:0,50,1075	0/0:39,0:39:89.91:0,90,1431	0/0:26,0:26:66.23:0,66,1077	1/1:3,30:33:41.07:1070,41,0	1/1:42,0:40:74.48:685,74,0	1/1:2,12:14:33.11:424,33,0
chr10	78160277	.	T	TTTTA	2261.44	PASS	AB=1.000;AC=21;AF=0.477;AN=44;BaseQRankSum=-0.937;DP=306;FS=1.724;HRun=0;HaplotypeScore=46.8882;InbreedingCoeff=0.6488;MQ=64.20;MQ0=1;MQRankSum=-3.546;QD=13.87;ReadPosRankSum=-1.757;VQSLOD=2.7886;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:12.04:0,12,187	0/1:4,0:4:7.19:7,0,81	./.	./.	0/0:13,0:13:18.03:0,18,235	1/1:6,5:10:9.03:212,9,0	./.	1/1:34,0:34:35.94:385,36,0	1/1:5,0:5:3.01:52,3,0	0/0:15,0:15:6.01:0,6,75	0/0:11,0:11:15.05:0,15,234	0/0:4,0:4:3.01:0,3,46	0/0:9,0:9:9.03:0,9,136	0/0:13,0:13:15.04:0,15,203	0/0:10,0:10:18.06:0,18,279	1/1:7,2:9:6.02:142,6,0	1/1:16,23:38:45.15:1061,45,0	1/1:14,0:14:8.76:74,9,0	1/1:21,0:21:11.97:128,12,0	1/1:5,0:5:3.01:31,3,0	./.	./.	./.	0/0:3,0:3:3.01:0,3,47	1/1:10,5:15:12.04:283,12,0	0/0:10,0:10:3.01:0,3,46	1/1:6,0:6:3.01:52,3,0	0/0:14,0:14:27.09:0,27,414
chr10	78160315	.	TTA	T	190.85	PASS	AB=0.923;AC=7;AF=0.130;AN=54;BaseQRankSum=5.062;DP=251;FS=1.027;HRun=0;HaplotypeScore=34.6127;InbreedingCoeff=0.0854;MQ=62.23;MQ0=5;MQRankSum=-3.613;QD=3.03;ReadPosRankSum=-1.029;VQSLOD=1.4569;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:36.11:0,36,562	0/1:5,0:5:27.80:28,0,167	0/0:8,0:4:11.76:0,12,128	0/0:6,0:2:6.02:0,6,90	0/0:9,0:9:27.06:0,27,407	0/0:9,0:8:18.06:0,18,236	./.	0/1:19,4:23:53.77:54,0,602	0/0:4,0:4:12.04:0,12,190	0/0:5,0:5:15.04:0,15,229	0/0:7,0:7:18.06:0,18,321	0/0:2,0:2:6.02:0,6,101	0/0:9,0:9:24.07:0,24,371	0/0:11,0:11:30.08:0,30,473	0/0:11,0:11:33.09:0,33,517	0/0:10,0:10:27.09:0,27,384	0/0:31,0:30:69.18:0,69,844	0/1:11,5:16:5.71:173,0,6	0/1:10,0:9:37.63:38,0,225	0/1:7,0:7:9.71:10,0,252	1/1:2,0:2:3.06:8,3,0	0/0:2,0:2:6.02:0,6,82	0/0:4,0:4:12.04:0,12,178	0/0:3,0:3:9.03:0,9,144	0/0:11,0:11:27.08:0,27,355	0/0:5,0:5:15.05:0,15,231	0/0:9,0:9:24.07:0,24,353	0/0:18,0:18:54.18:0,54,904
chr10	78161524	.	GA	G	14355.82	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=11.639;DP=595;FS=0.000;HRun=7;HaplotypeScore=105.1363;InbreedingCoeff=0.9983;MQ=73.46;MQ0=0;MQRankSum=-4.024;QD=27.71;ReadPosRankSum=0.742;VQSLOD=4.4480;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.19:0,63,779	1/1:0,13:13:39.09:398,39,0	0/0:11,0:11:27.08:0,27,328	0/0:8,0:8:21.02:0,21,238	1/1:3,40:43:99:1102,108,0	1/1:3,17:20:54.07:539,54,0	1/1:0,14:14:39.09:398,39,0	1/1:1,34:35:99:1034,102,0	1/1:2,19:21:51.12:520,51,0	1/1:0,19:19:57.13:582,57,0	1/1:0,35:35:99:1040,102,0	1/1:2,11:13:30.06:306,30,0	1/1:0,19:19:57.13:582,57,0	1/1:2,12:14:36.08:367,36,0	1/1:4,23:27:69.15:704,69,0	1/1:1,16:17:45.10:459,45,0	1/1:1,22:23:63.14:642,63,0	1/1:2,19:21:54.12:551,54,0	1/1:2,16:18:48.08:481,48,0	1/1:2,24:26:66.15:673,66,0	1/1:1,14:15:42.09:428,42,0	1/1:0,27:27:81.18:826,81,0	1/1:2,26:28:78.17:796,78,0	1/1:1,10:11:30.07:306,30,0	1/1:0,28:28:81.18:826,81,0	0/0:27,0:27:72.23:0,72,906	1/1:3,28:31:78.18:796,78,0	0/0:9,0:9:27.09:0,27,340
chr10	78162484	.	T	TGC	3116.28	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=-2.574;DP=475;FS=32.198;HRun=0;HaplotypeScore=154.6193;InbreedingCoeff=0.3910;MQ=49.30;MQ0=7;MQRankSum=-0.546;QD=7.58;ReadPosRankSum=0.660;VQSLOD=1.2154;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:40:76.62:0,77,961	1/1:9,0:9:10.74:63,11,0	0/0:12,0:6:5.68:0,6,28	0/0:10,0:3:2.84:0,3,14	0/1:19,0:19:3.26:98,0,3	1/1:14,0:14:2.03:155,2,0	1/1:15,0:15:20.06:159,20,0	1/1:23,0:23:27.15:268,27,0	1/1:13,0:13:22.83:128,23,0	1/1:25,0:25:31.58:233,32,0	1/1:13,0:13:20.69:142,21,0	1/1:27,0:27:28.30:174,28,0	1/1:13,0:13:16.38:84,16,0	1/1:20,0:20:18.24:122,18,0	1/1:10,0:10:0.20:2,0,0	1/1:15,0:15:16.44:99,16,0	1/1:23,0:23:36.63:242,37,0	1/1:6,9:15:13.63:207,14,0	1/1:12,0:12:18.70:138,19,0	1/1:18,0:16:6.27:57,6,0	1/1:22,0:22:17.98:150,18,0	0/1:15,0:15:9.02:120,0,9	1/1:19,0:19:15.36:100,15,0	1/1:20,0:20:29.80:224,30,0	1/1:17,0:17:18.15:118,18,0	0/1:16,0:15:44.42:71,0,44	1/1:13,0:13:17.77:98,18,0	0/1:5,0:5:12.52:13,0,36
chr10	78162491	.	G	GCACA	308.42	PASS	AB=1.000;AC=11;AF=0.220;AN=50;BaseQRankSum=-2.674;DP=466;FS=2.852;HRun=0;HaplotypeScore=181.1960;InbreedingCoeff=0.2695;MQ=46.61;MQ0=9;MQRankSum=0.469;QD=2.19;ReadPosRankSum=-2.684;VQSLOD=2.3662;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:40:45.15:0,45,805	0/0:8,0:8:6:0,6,53	./.	./.	0/1:19,0:19:21.99:22,0,42	0/1:12,0:12:0:0,0,0	0/0:15,0:15:5.37:0,5,36	1/1:18,0:18:5.47:30,5,0	0/0:14,0:14:9.19:0,9,135	0/0:22,0:22:23.61:0,24,177	0/0:10,0:10:5.89:0,6,37	0/1:28,0:28:9.75:10,0,146	0/0:13,0:13:18.90:0,19,169	0/0:20,0:20:11.71:0,12,73	0/0:10,0:10:6.01:0,6,56	0/0:14,0:14:0.41:0,0,77	0/1:22,0:22:3.35:3,0,96	0/0:20,0:20:1.34:0,1,201	0/0:10,0:10:8.87:0,9,67	0/0:23,0:21:19.95:0,20,150	./.	0/0:17,0:17:8.92:0,9,116	0/1:19,0:19:32.60:33,0,92	0/0:23,0:22:2.99:0,3,24	0/0:16,0:16:14.61:0,15,121	1/1:5,7:15:21.62:260,22,0	0/0:14,0:13:14.90:0,15,120	1/1:3,1:7:5.75:84,6,0
chr10	78162509	.	ACACACACACACACACG	A	7338.84	PASS	AB=0.985;AC=27;AF=0.482;AN=56;BaseQRankSum=9.134;DP=567;FS=21.278;HRun=0;HaplotypeScore=241.2462;InbreedingCoeff=0.2913;MQ=46.03;MQ0=14;MQRankSum=-6.479;QD=20.44;ReadPosRankSum=6.260;VQSLOD=2.1254;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:42:99:0,102,5013	1/1:7,1:8:6.02:175,6,0	0/0:16,0:8:23.62:0,24,409	0/0:16,0:6:18.02:0,18,529	0/1:23,1:24:5.84:443,0,6	0/1:16,0:16:36.96:118,0,37	1/1:20,0:19:9.03:217,9,0	0/0:22,0:20:13.65:0,14,623	0/1:19,1:19:72.23:558,0,72	0/1:23,0:23:43.55:842,0,44	1/1:17,0:17:8.94:193,9,0	0/1:39,0:39:28.21:715,0,28	0/1:20,1:21:4.19:714,0,4	1/1:19,0:19:15.05:430,15,0	1/1:21,0:21:8.39:179,8,0	1/1:17,0:16:15.05:438,15,0	0/1:19,0:19:99:453,0,108	0/0:19,0:19:32.01:0,32,1927	0/1:13,0:13:37.49:37,0,279	0/0:27,0:25:21.07:0,21,488	0/0:14,0:14:3:0,3,25	1/1:16,1:17:21.07:635,21,0	1/1:18,2:19:24.08:750,24,0	1/1:26,0:25:0.47:1,0,0	0/1:19,0:19:55.20:439,0,55	0/0:20,0:20:50.96:0,51,1988	0/0:22,0:21:21.54:0,22,412	0/0:8,0:8:21.04:0,21,750
chr10	78162511	.	ACACACACACACACG	A	9866.38	PASS	AB=0.864;AC=35;AF=0.625;AN=56;BaseQRankSum=6.203;DP=572;FS=16.401;HRun=0;HaplotypeScore=220.2218;InbreedingCoeff=0.4612;MQ=47.28;MQ0=14;MQRankSum=-5.990;QD=24.01;ReadPosRankSum=5.008;VQSLOD=1.6961;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:42:99:0,105,4334	1/1:4,4:8:6.02:244,6,0	0/0:20,0:11:30.24:0,30,400	0/1:17,0:7:6.75:7,0,398	1/1:6,18:24:15.04:560,15,0	1/1:5,10:15:5.91:126,6,0	1/1:19,2:20:12.01:294,12,0	0/1:20,0:18:19.97:20,0,341	0/1:8,12:19:61.40:688,0,61	1/1:8,15:23:42.03:1208,42,0	1/1:4,13:17:8.95:260,9,0	1/1:12,26:38:3.71:1023,4,0	1/1:3,18:21:24.08:935,24,0	1/1:4,18:22:14.70:606,15,0	1/1:4,18:22:8.82:256,9,0	1/1:2,15:16:15.05:607,15,0	0/1:15,4:19:96.07:608,0,96	0/0:19,0:19:28.12:0,28,1613	0/1:14,0:14:99:112,0,132	0/0:27,0:25:20.69:0,21,312	0/1:12,0:12:0:0,0,0	1/1:5,12:17:21.07:831,21,0	1/1:9,11:19:24.08:910,24,0	1/1:11,14:24:0.47:1,0,0	0/1:6,13:19:3.32:570,0,3	0/0:20,0:20:50.70:0,51,1670	0/0:23,0:22:18.13:0,18,227	0/0:8,0:8:21.03:0,21,668
chr10	78162517	.	ACACACACG	A	6172.45	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=8.913;DP=569;FS=1.021;HRun=0;HaplotypeScore=193.1500;InbreedingCoeff=0.6387;MQ=47.52;MQ0=14;MQRankSum=-7.217;QD=14.32;ReadPosRankSum=4.609;VQSLOD=3.9749;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:42:80.01:0,80,2482	1/1:6,0:6:6.02:120,6,0	0/0:24,0:14:38.74:0,39,319	0/0:22,0:13:7.97:0,8,246	1/1:24,0:24:15.05:271,15,0	1/1:14,0:14:3.01:48,3,0	1/1:22,0:21:18.01:221,18,0	1/1:20,0:18:31.15:248,31,0	0/1:18,0:17:54.91:337,0,55	1/1:23,0:23:42.04:652,42,0	1/1:14,0:14:8.95:137,9,0	1/1:37,0:37:27.08:493,27,0	1/1:20,0:20:24.08:460,24,0	1/1:22,0:22:14.95:298,15,0	1/1:22,0:22:8.96:137,9,0	1/1:17,0:16:15.05:298,15,0	0/1:20,0:20:33.66:293,0,34	0/0:19,0:19:2.59:0,3,646	1/1:2,12:14:38.82:425,39,0	1/1:12,17:27:9.34:289,9,0	1/1:12,1:13:6:50,6,0	1/1:15,0:15:21.07:418,21,0	1/1:20,0:19:24.08:455,24,0	0/1:21,0:20:0:0,0,0	1/1:17,0:17:14.59:298,15,0	0/0:21,0:21:26.47:0,26,937	1/1:22,1:22:15.19:223,15,0	0/0:8,0:8:21.03:0,21,486
chr10	78162519	.	ACACACG	A	5332.89	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=8.532;DP=554;FS=1.037;HRun=0;HaplotypeScore=180.9207;InbreedingCoeff=0.5833;MQ=47.60;MQ0=13;MQRankSum=-6.772;QD=12.20;ReadPosRankSum=4.146;VQSLOD=4.0550;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:43:78.14:0,78,1921	1/1:6,0:6:6.02:92,6,0	0/0:23,0:14:38.66:0,39,299	0/0:20,0:13:7.94:0,8,211	1/1:23,0:23:15.04:202,15,0	1/1:14,0:14:3.01:34,3,0	1/1:22,0:21:21:217,21,0	1/1:20,0:18:35.44:286,35,0	0/1:17,0:16:47.78:253,0,48	1/1:22,0:22:42.04:526,42,0	1/1:14,0:14:8.94:109,9,0	1/1:37,0:37:26.83:368,27,0	1/1:20,0:20:24.07:349,24,0	1/1:21,0:21:14.96:228,15,0	1/1:22,0:22:8.96:110,9,0	1/1:17,0:16:15.05:228,15,0	0/1:18,0:18:11.62:227,0,12	0/1:19,0:19:49.31:49,0,219	1/1:12,1:13:38.88:400,39,0	1/1:23,6:27:21.02:389,21,0	1/1:12,1:13:5.99:50,6,0	1/1:14,0:14:21.07:321,21,0	1/1:19,0:18:24.06:344,24,0	0/1:19,0:18:0:0,0,0	1/1:17,0:17:14.91:229,15,0	0/0:21,0:21:26.44:0,26,705	1/1:7,14:20:15.52:324,16,0	0/0:8,0:8:21.03:0,21,379
chr10	78163664	.	TA	T	7622.91	PASS	AB=0.699;AC=48;AF=0.857;AN=56;BaseQRankSum=2.431;DP=539;FS=12.017;HRun=12;HaplotypeScore=61.1531;InbreedingCoeff=0.4274;MQ=71.45;MQ0=3;MQRankSum=-2.070;QD=15.12;ReadPosRankSum=2.997;VQSLOD=4.9513;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,1:15:9.83:0,10,281	1/1:2,9:11:26.89:209,27,0	0/0:20,0:12:14.36:0,14,91	0/1:19,0:14:0.83:1,0,67	1/1:6,18:24:23.32:364,23,0	1/1:1,27:29:79.50:598,79,0	1/1:2,6:8:14.92:116,15,0	1/1:11,24:35:74.09:557,74,0	1/1:2,11:13:23.91:186,24,0	1/1:6,20:28:59.06:429,59,0	1/1:2,23:25:68.65:526,69,0	1/1:2,7:9:17.93:139,18,0	1/1:2,19:22:52.62:400,53,0	0/1:3,12:15:13.24:237,0,13	1/1:0,12:13:25.95:192,26,0	1/1:6,13:19:1.47:184,1,0	1/1:1,21:22:47.81:371,48,0	1/1:4,13:18:10.44:254,10,0	0/1:8,8:17:4.55:142,0,5	1/1:7,22:29:2.97:457,3,0	1/1:2,17:19:47.82:371,48,0	1/1:4,16:20:38.82:301,39,0	0/1:8,19:27:12.30:278,0,12	1/1:3,5:8:14.94:116,15,0	1/1:5,22:27:23.35:364,23,0	1/1:5,16:21:47.77:366,48,0	1/1:3,18:21:47.80:371,48,0	1/1:0,5:5:11.95:93,12,0
chr10	78164122	.	C	CTCAT	22507.04	PASS	AB=0.600;AC=45;AF=0.804;AN=56;BaseQRankSum=-7.493;DP=667;FS=4.616;HRun=0;HaplotypeScore=97.1368;InbreedingCoeff=0.8870;MQ=73.75;MQ0=4;MQRankSum=-3.950;QD=39.84;ReadPosRankSum=2.339;VQSLOD=4.5604;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.15:0,45,749	1/1:2,12:13:33.11:797,33,0	0/0:19,0:18:36.06:0,36,480	0/0:27,0:27:33.11:0,33,503	1/1:12,26:40:75.15:1681,75,0	1/1:8,24:32:51.18:1258,51,0	1/1:7,15:23:33.11:814,33,0	1/1:18,0:34:56.79:679,57,0	1/1:4,16:20:48.16:1177,48,0	1/1:8,16:26:57.18:1333,57,0	1/1:11,16:27:45.63:1109,46,0	1/1:2,20:22:45.15:1104,45,0	1/1:5,14:21:45.15:1103,45,0	1/1:4,21:24:48.16:1182,48,0	1/1:5,20:29:51.18:1256,51,0	1/1:5,25:29:60.21:1480,60,0	1/1:3,20:25:36.12:888,36,0	1/1:3,0:7:12.04:210,12,0	1/1:17,1:34:69.06:1077,69,0	1/1:7,1:29:51.09:864,51,0	1/1:5,0:12:9.03:161,9,0	0/1:8,15:24:4.89:934,0,5	1/1:5,19:26:44.88:1109,45,0	1/1:0,10:11:24.08:592,24,0	1/1:5,16:21:45.15:1110,45,0	0/0:32,0:32:66.13:0,66,968	1/1:10,0:28:33.11:591,33,0	0/0:7,0:7:12.04:0,12,200
chr10	78164212	.	ATTTTG	A	259.16	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.572;DP=579;FS=4.205;HRun=0;HaplotypeScore=103.8796;InbreedingCoeff=0.9790;MQ=75.27;MQ0=4;MQRankSum=-3.626;QD=51.83;ReadPosRankSum=0.139;VQSLOD=3.7228;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.22:0,63,1951	0/0:12,0:11:33.10:0,33,944	0/0:13,0:13:33.01:0,33,789	0/0:12,0:12:29.76:0,30,688	0/0:32,0:31:93.32:0,93,2796	0/0:23,0:23:69.24:0,69,2135	0/0:19,0:19:57.20:0,57,1747	0/0:28,0:28:78.23:0,78,2160	0/0:17,0:17:51.18:0,51,1546	0/0:28,0:28:84.29:0,84,2557	0/0:22,0:21:63.21:0,63,1799	0/0:17,0:17:48.16:0,48,1445	0/0:26,0:25:66.23:0,66,2008	0/0:18,0:17:51.18:0,51,1552	0/0:20,0:20:48.16:0,48,1488	0/0:26,0:25:69.24:0,69,2135	0/0:23,0:23:60.21:0,60,1855	1/1:0,5:5:15.05:348,15,0	0/0:20,0:20:57.09:0,57,1667	0/0:23,0:23:69.24:0,69,2086	0/0:15,0:15:45.15:0,45,1388	0/0:19,0:19:57.20:0,57,1765	0/0:25,0:25:69.17:0,69,2098	0/0:19,0:19:51.17:0,51,1579	0/0:33,0:33:96.33:0,96,2969	0/0:26,0:26:78.25:0,78,2336	0/0:30,0:29:87.30:0,87,2667	0/0:7,0:7:21.07:0,21,647
chr10	78164389	.	TG	T	9607.43	PASS	AB=1.000;AC=47;AF=0.870;AN=54;BaseQRankSum=3.994;DP=486;FS=6.755;HRun=9;HaplotypeScore=64.4770;InbreedingCoeff=0.8435;MQ=65.91;MQ0=0;MQRankSum=0.291;QD=22.09;ReadPosRankSum=1.730;VQSLOD=5.8062;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:75.21:0,75,854	1/1:2,8:10:24.01:219,24,0	0/1:11,0:8:3.76:4,0,56	0/0:9,0:8:5.69:0,6,46	1/1:5,11:16:33.01:301,33,0	1/1:2,15:17:42.02:384,42,0	1/1:4,13:17:36.01:329,36,0	1/1:4,12:16:35.99:323,36,0	1/1:2,14:16:36.02:329,36,0	1/1:1,14:16:41.06:363,41,0	1/1:2,20:22:50.96:458,51,0	1/1:3,20:23:57.02:518,57,0	1/1:2,16:18:42.02:384,42,0	1/1:3,24:27:69.03:631,69,0	1/1:1,17:18:48.03:439,48,0	1/1:3,20:23:57.03:522,57,0	1/1:1,15:16:45.02:412,45,0	1/1:2,11:13:37.46:316,37,0	1/1:2,11:12:33.02:301,33,0	1/1:2,20:22:60.02:549,60,0	1/1:5,21:26:60.03:549,60,0	1/1:1,22:23:63.03:576,63,0	1/1:1,11:12:27.01:247,27,0	1/1:2,14:16:39.02:357,39,0	1/1:2,16:18:45.02:411,45,0	0/0:4,0:10:14.39:0,14,84	1/1:1,25:26:75.04:686,75,0	./.
chr10	78165671	.	A	AACTT	31688.26	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=8.729;DP=631;FS=4.077;HRun=0;HaplotypeScore=147.0603;InbreedingCoeff=0.9310;MQ=71.53;MQ0=0;MQRankSum=-11.169;QD=58.79;ReadPosRankSum=0.801;VQSLOD=6.4310;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:96.33:0,96,1781	1/1:1,13:14:42.14:1073,42,0	0/0:19,0:19:48.12:0,48,844	0/1:13,0:13:0.15:0,0,523	1/1:3,20:25:48.16:1209,48,0	1/1:2,19:20:63.22:1578,63,0	1/1:6,12:20:45.10:1014,45,0	1/1:7,19:28:75.23:1753,75,0	1/1:4,13:17:45.12:1085,45,0	1/1:2,25:28:84.24:2050,84,0	1/1:8,16:27:63:1329,63,0	1/1:4,30:34:81.28:2094,81,0	1/1:3,18:23:63.22:1577,63,0	1/1:7,30:38:96.24:2401,96,0	1/1:5,35:41:99:2580,102,0	1/1:7,18:25:54.18:1403,54,0	1/1:7,10:17:33.11:837,33,0	1/1:4,6:11:27.09:702,27,0	1/1:5,12:15:42.14:1092,42,0	1/1:3,16:19:48.16:1205,48,0	1/1:3,20:22:42.14:1060,42,0	1/1:2,13:15:36.12:916,36,0	1/1:5,14:20:42.06:932,42,0	1/1:5,10:16:29.97:667,30,0	1/1:2,18:20:57.20:1454,57,0	0/0:24,0:23:63.20:0,63,1098	1/1:6,20:27:66.23:1676,66,0	0/0:10,0:10:15.05:0,15,280
chr10	78165795	.	GTGTGTGTC	G	761.94	PASS	AB=0.979;AC=20;AF=0.357;AN=56;BaseQRankSum=-1.193;DP=520;FS=16.392;HRun=0;HaplotypeScore=167.4675;InbreedingCoeff=-0.0755;MQ=53.09;MQ0=17;MQRankSum=-2.067;QD=2.78;ReadPosRankSum=-2.831;VQSLOD=1.3369;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:21.60:0,22,2145	1/1:12,0:12:2.96:20,3,0	0/1:16,0:7:23.06:23,0,96	0/0:14,0:4:8.98:0,9,135	0/0:19,0:19:6.58:0,7,392	0/1:15,0:14:12.27:12,0,126	0/0:22,0:20:2.03:0,2,6	0/1:24,0:19:13.75:124,0,14	0/1:20,0:19:26.41:26,0,225	0/0:11,0:10:1.57:0,2,319	0/1:20,0:20:26.49:26,0,73	0/1:25,0:24:1.13:1,0,433	0/0:24,0:23:27.52:0,28,571	0/0:27,0:27:0.76:0,1,496	0/0:24,0:24:7.30:0,7,42	0/1:20,0:20:14.54:15,0,186	0/0:14,0:13:3.53:0,4,62	0/0:9,0:8:0.77:0,1,178	0/1:14,0:13:3.56:4,0,98	0/0:15,0:15:20.54:0,21,142	0/1:22,0:20:13.03:13,0,278	1/1:22,0:21:2.78:30,3,0	0/1:20,0:19:22.87:23,0,446	1/1:18,0:18:11.23:73,11,0	0/1:10,0:10:7.69:8,0,173	1/1:3,10:11:29.45:448,29,0	0/0:29,0:28:48.52:0,49,603	0/1:2,1:3:42.42:71,0,42
chr10	78165821	.	GTC	G	5081.16	PASS	AB=0.856;AC=42;AF=0.750;AN=56;BaseQRankSum=1.511;DP=574;FS=31.647;HRun=0;HaplotypeScore=124.4372;InbreedingCoeff=0.4108;MQ=68.39;MQ0=5;MQRankSum=-3.102;QD=11.37;ReadPosRankSum=0.950;VQSLOD=2.6514;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:73.24:0,73,1382	1/1:0,11:11:3.01:46,3,0	0/0:46,0:31:56.22:0,56,922	0/0:25,0:10:15.30:0,15,271	1/1:15,3:18:39.08:519,39,0	1/1:13,4:17:11.65:170,12,0	1/1:1,23:24:8.75:109,9,0	1/1:1,23:24:65.74:709,66,0	1/1:17,0:16:21.49:238,21,0	1/1:2,8:10:20.94:257,21,0	1/1:1,19:20:5.95:90,6,0	1/1:22,3:24:38.65:416,39,0	1/1:19,5:24:44.81:509,45,0	1/1:23,4:27:30.25:313,30,0	1/1:3,20:23:3.01:46,3,0	0/1:2,20:22:8.29:122,0,8	1/1:1,13:14:6:69,6,0	1/1:14,0:14:6.46:172,6,0	1/1:12,1:11:2.32:129,2,0	0/1:16,1:17:10.34:139,0,10	0/1:21,1:21:67.02:115,0,67	1/1:2,17:19:3.01:46,3,0	1/1:14,5:18:19.42:358,19,0	1/1:2,17:19:2.96:19,3,0	1/1:15,0:15:33.06:407,33,0	0/0:15,0:13:28.66:0,29,177	0/1:33,0:33:83.44:83,0,147	0/0:1,0:1:2.04:0,2,6
chr10	78166937	.	TC	T	675.98	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.710;DP=735;FS=0.000;HRun=9;HaplotypeScore=79.3779;InbreedingCoeff=0.9780;MQ=75.80;MQ0=2;MQRankSum=0.142;QD=16.09;ReadPosRankSum=1.011;VQSLOD=3.7901;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,123,1384	0/0:16,0:16:42.11:0,42,475	0/0:46,0:40:67.10:0,67,690	0/0:22,0:14:13.38:0,13,167	0/0:27,0:30:75:0,75,819	0/0:20,0:23:44.97:0,45,499	0/0:37,0:37:99:0,104,1166	0/0:31,0:32:80.94:0,81,869	0/0:14,0:14:39.07:0,39,418	0/0:27,0:27:66.17:0,66,739	0/0:19,0:19:51.14:0,51,573	0/0:25,0:25:63.18:0,63,718	0/0:28,0:28:81.22:0,81,918	0/0:23,0:23:66.18:0,66,750	0/0:24,0:24:69.18:0,69,776	0/0:35,0:35:96.26:0,96,1090	0/0:25,0:25:72.21:0,72,831	0/0:2,0:17:28.56:0,29,153	0/0:12,0:12:30.08:0,30,337	0/0:35,0:35:99:0,105,1181	0/0:28,0:29:83.86:0,84,895	0/0:20,0:20:43.21:0,43,578	0/0:19,0:19:45.12:0,45,509	0/0:30,0:30:79.08:0,79,872	0/0:27,0:27:75.16:0,75,840	1/1:5,23:28:14.62:547,15,0	0/0:31,0:31:81.03:0,81,899	1/1:4,10:14:27.01:247,27,0
chr10	78168227	.	TA	T	10777.75	PASS	AB=0.955;AC=51;AF=0.911;AN=56;BaseQRankSum=2.482;DP=593;FS=2.672;HRun=10;HaplotypeScore=64.5142;InbreedingCoeff=0.7976;MQ=85.31;MQ0=0;MQRankSum=-3.805;QD=19.92;ReadPosRankSum=2.609;VQSLOD=5.9070;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.20:0,81,886	1/1:1,11:12:29.99:260,30,0	0/0:21,0:21:5.50:0,5,283	0/1:20,1:20:1.11:1,0,120	1/1:2,21:23:47.21:505,47,0	1/1:3,24:27:65.97:573,66,0	1/1:3,13:16:32.99:286,33,0	1/1:10,27:37:80.84:682,81,0	1/1:1,10:11:26.99:234,27,0	1/1:4,29:33:86.96:751,87,0	1/1:0,15:15:35.93:305,36,0	1/1:0,15:15:41.99:365,42,0	1/1:2,21:23:56.98:494,57,0	1/1:4,18:22:50.98:443,51,0	1/1:5,25:30:35.76:533,36,0	1/1:1,15:16:38.99:339,39,0	1/1:2,20:22:47.99:417,48,0	1/1:1,22:23:56.94:488,57,0	1/1:2,16:18:50.93:434,51,0	1/1:4,28:32:83.92:720,84,0	1/1:3,13:16:35.99:313,36,0	1/1:2,15:17:35.98:312,36,0	1/1:3,17:20:27.12:393,27,0	1/1:0,18:18:47.99:417,48,0	1/1:5,30:35:80.97:703,81,0	1/1:4,12:16:38.98:336,39,0	1/1:2,16:19:50.01:423,50,0	1/1:2,2:4:5.99:52,6,0
chr10	78168777	.	TCA	T	2198.21	PASS	AB=0.898;AC=33;AF=0.660;AN=50;BaseQRankSum=3.827;DP=534;FS=3.052;HRun=0;HaplotypeScore=85.0266;InbreedingCoeff=0.3592;MQ=59.96;MQ0=12;MQRankSum=0.467;QD=5.83;ReadPosRankSum=0.990;VQSLOD=3.0135;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:14.98:0,15,246	1/1:7,3:10:6.02:65,6,0	./.	./.	1/1:13,2:15:1.69:30,2,0	1/1:11,3:14:8.05:71,8,0	1/1:14,4:17:11.86:111,12,0	0/0:19,0:19:3.01:0,3,37	1/1:7,8:16:14.86:141,15,0	0/1:23,1:25:10.46:76,0,10	./.	0/1:11,3:13:29.39:111,0,29	1/1:18,6:24:20.19:185,20,0	1/1:16,1:17:11.22:86,11,0	1/1:16,3:20:14.86:137,15,0	1/1:16,6:22:26.24:249,26,0	1/1:18,7:25:34.27:338,34,0	1/1:12,0:20:11.36:56,11,0	0/0:10,0:9:3.01:0,3,42	0/0:12,0:12:2.99:0,3,24	0/1:25,0:25:21.18:21,0,89	0/1:14,2:16:32.43:72,0,32	1/1:15,4:20:20.42:173,20,0	1/1:18,9:25:27.06:286,27,0	1/1:16,4:20:16.12:147,16,0	0/0:11,0:10:12.02:0,12,140	0/1:21,3:24:8.38:8,0,228	0/0:14,0:14:5.40:0,5,161
chr10	78170591	.	TAC	T	818.27	PASS	AB=0.971;AC=11;AF=0.212;AN=52;BaseQRankSum=-1.325;DP=685;FS=5.552;HRun=0;HaplotypeScore=116.4806;InbreedingCoeff=0.5942;MQ=57.60;MQ0=11;MQRankSum=0.692;QD=5.53;ReadPosRankSum=-0.186;VQSLOD=2.8860;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:14.87:0,15,202	0/0:4,0:11:15:0,15,131	./.	./.	0/0:12,0:24:14.93:0,15,146	0/0:22,0:36:8.83:0,9,76	0/0:15,0:28:9:0,9,79	0/1:17,1:16:7.93:27,0,8	0/0:28,0:29:14.48:0,14,115	0/0:14,0:23:39.05:0,39,438	0/0:14,0:21:23.57:0,24,260	0/0:12,0:26:19.25:0,19,179	0/0:15,0:21:27.01:0,27,270	0/0:13,1:34:11.85:0,12,375	0/0:13,0:29:41.64:0,42,375	0/0:7,0:20:12.08:0,12,112	0/0:21,0:34:5.43:0,5,36	0/0:9,0:16:10.68:0,11,76	1/1:12,2:13:6.49:67,6,0	1/1:15,8:24:24.58:226,25,0	1/1:9,14:24:35.93:379,36,0	0/1:16,1:29:9.29:9,0,176	0/0:15,0:16:14.07:0,14,181	0/0:20,1:39:17.84:0,18,419	0/0:13,0:22:8.23:0,8,39	0/0:26,0:26:33.94:0,34,405	1/1:15,11:25:23.63:264,24,0	0/1:12,0:12:4.06:4,0,102
chr10	78170978	.	GTCT	G	5296.49	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=3.314;DP=507;FS=13.601;HRun=0;HaplotypeScore=98.6457;InbreedingCoeff=0.6943;MQ=79.77;MQ0=2;MQRankSum=-4.105;QD=18.39;ReadPosRankSum=8.389;VQSLOD=3.0124;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.24:0,81,1336	0/0:5,0:5:4.22:0,4,36	0/0:27,0:23:50.09:0,50,892	0/0:17,0:15:41.83:0,42,660	0/0:12,0:12:2.95:0,3,41	1/1:28,1:29:60.14:641,60,0	1/1:30,0:30:66.09:729,66,0	0/0:20,0:20:19.78:0,20,95	1/1:19,0:19:45.08:485,45,0	0/0:11,0:11:10.06:0,10,59	0/1:11,0:11:1.97:2,0,18	1/1:25,0:25:36.27:476,36,0	1/1:23,1:24:50.58:596,51,0	0/1:23,0:23:8.43:8,0,35	0/0:23,0:23:12.72:0,13,107	1/1:26,1:27:60.19:629,60,0	1/1:27,1:28:12.76:508,13,0	0/0:11,0:10:26.98:0,27,259	0/0:13,0:13:8.51:0,9,135	0/1:11,0:11:1.31:1,0,42	0/0:17,0:17:10.24:0,10,91	1/1:17,1:18:38.99:466,39,0	1/1:14,0:14:23.68:264,24,0	1/1:14,0:14:17.67:196,18,0	0/1:15,0:15:8.41:294,0,8	0/0:9,0:9:6.89:0,7,25	0/0:20,0:20:25.06:0,25,136	0/0:4,0:4:12.03:0,12,142
chr10	78170980	.	CT	C	6513.11	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=1.388;DP=503;FS=4.921;HRun=2;HaplotypeScore=81.9257;InbreedingCoeff=0.9061;MQ=79.22;MQ0=2;MQRankSum=-4.013;QD=15.66;ReadPosRankSum=4.093;VQSLOD=4.9604;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:66.28:0,66,716	1/1:3,2:5:14.92:127,15,0	0/0:25,0:22:28.36:0,28,567	0/0:18,0:15:35.91:0,36,377	1/1:7,5:12:20.98:193,21,0	1/1:29,0:29:59.72:456,60,0	1/1:32,0:32:70.64:519,71,0	1/1:17,1:18:51.01:458,51,0	1/1:19,0:19:44.15:325,44,0	1/1:1,11:12:26.90:272,27,0	1/1:1,10:11:17.89:159,18,0	1/1:25,0:25:30.23:343,30,0	1/1:23,1:24:53.69:402,54,0	1/1:1,22:23:21.05:248,21,0	1/1:4,17:21:5.26:160,5,0	1/1:27,0:27:62.63:470,63,0	1/1:27,0:27:53.58:395,54,0	0/0:11,0:10:26.29:0,26,165	1/1:4,10:14:30:321,30,0	1/1:0,9:10:17.77:132,18,0	1/1:12,4:16:35.76:277,36,0	1/1:17,1:18:38.52:270,39,0	1/1:13,0:13:23.88:184,24,0	1/1:14,0:14:17.69:137,18,0	1/1:15,0:15:14.84:204,15,0	1/1:7,1:8:17.93:146,18,0	1/1:1,17:19:25.31:289,25,0	1/1:4,0:4:3.66:25,4,0
chr10	78170981	.	TTCC	T	9684.88	PASS	AB=0.945;AC=36;AF=0.643;AN=56;BaseQRankSum=-6.569;DP=500;FS=0.905;HRun=0;HaplotypeScore=82.7995;InbreedingCoeff=0.4856;MQ=78.61;MQ0=2;MQRankSum=-4.073;QD=26.39;ReadPosRankSum=5.555;VQSLOD=4.3356;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:83.96:0,84,1166	1/1:5,0:5:0.64:32,1,0	0/0:25,1:22:44.45:0,44,843	0/0:17,0:14:35.95:0,36,508	0/1:12,0:13:25.17:50,0,25	1/1:1,28:29:59.30:1093,59,0	1/1:0,32:32:71.81:1221,72,0	1/1:18,0:18:40.13:338,40,0	1/1:0,19:19:45.15:803,45,0	0/1:11,0:12:8.86:63,0,9	0/1:11,0:11:3.97:37,0,4	1/1:1,23:25:50.79:834,51,0	1/1:2,22:24:54.12:945,54,0	0/0:22,0:23:2.42:0,2,35	0/1:18,0:19:2.71:3,0,56	1/1:1,26:27:63.13:1076,63,0	1/1:2,24:26:54.07:905,54,0	0/0:12,0:11:18.30:0,18,69	0/1:11,0:12:30.10:30,0,65	1/1:10,0:10:0.84:26,1,0	0/1:16,0:17:27.86:134,0,28	1/1:2,16:18:39.13:684,39,0	1/1:0,13:13:23.71:439,24,0	1/1:0,14:14:18.06:328,18,0	1/1:1,14:15:15.12:523,15,0	1/1:8,0:8:15.40:120,15,0	0/0:19,0:19:20.65:0,21,77	0/0:4,0:4:11.96:0,12,106
chr10	78170982	.	TCCCC	T	302.47	PASS	AB=0.962;AC=3;AF=0.054;AN=56;BaseQRankSum=-2.526;DP=501;FS=0.000;HRun=11;HaplotypeScore=123.9554;InbreedingCoeff=0.5240;MQ=78.36;MQ0=2;MQRankSum=0.333;QD=8.17;ReadPosRankSum=0.717;VQSLOD=-0.0723;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:29:57.17:0,57,1012	0/0:5,0:5:11.99:0,12,141	0/0:25,0:22:13.67:0,14,557	0/0:18,0:15:30.07:0,30,467	0/0:13,0:13:20.86:0,21,286	0/0:29,0:29:37.22:0,37,107	0/0:32,0:32:39.14:0,39,145	0/0:19,0:19:16.57:0,17,170	0/0:19,0:19:27.28:0,27,89	0/0:12,0:12:17.58:0,18,253	0/0:11,0:11:11.96:0,12,136	0/1:24,0:25:5.01:5,0,55	0/0:24,0:24:32.31:0,32,96	0/0:23,0:23:21.05:0,21,325	0/0:21,0:21:17.81:0,18,343	0/0:27,0:27:32.17:0,32,102	0/0:26,0:26:29.97:0,30,101	1/1:1,11:11:27.04:395,27,0	0/0:13,0:13:36.10:0,36,576	0/0:10,0:10:14.96:0,15,155	0/0:17,0:17:24:0,24,323	0/0:18,0:18:14.27:0,14,62	0/0:13,0:13:16.72:0,17,51	0/0:14,0:14:9.87:0,10,30	0/0:15,0:15:15.38:0,15,46	0/0:7,0:7:3:0,3,27	0/0:19,0:19:27.09:0,27,423	0/0:4,0:4:12.04:0,12,258
chr10	78171649	.	AGTGTGTGTGT	A	6812.81	PASS	AB=0.777;AC=34;AF=0.630;AN=54;BaseQRankSum=7.851;DP=610;FS=14.221;HRun=0;HaplotypeScore=204.4900;InbreedingCoeff=0.7387;MQ=62.63;MQ0=13;MQRankSum=-8.459;QD=18.07;ReadPosRankSum=-0.050;VQSLOD=3.0446;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:84.23:0,84,3478	1/1:4,0:6:3.01:70,3,0	./.	0/0:22,0:19:5.98:0,6,55	0/1:5,8:14:0.02:0,0,0	1/1:12,14:25:21.07:623,21,0	1/1:24,10:35:12.04:338,12,0	0/0:21,0:21:21.07:0,21,512	1/1:10,11:20:21.07:627,21,0	1/1:12,11:25:39.11:865,39,0	1/1:7,4:12:3.48:90,3,0	1/1:12,13:26:30.07:771,30,0	1/1:11,9:20:18.06:477,18,0	1/1:12,10:24:15.05:428,15,0	1/1:7,14:22:21.07:607,21,0	1/1:11,9:23:27.09:746,27,0	1/1:17,5:22:12.01:293,12,0	0/1:16,1:17:63.49:92,0,63	0/0:16,0:16:12.40:0,12,369	0/0:17,0:18:24.08:0,24,955	0/0:33,0:37:39.12:0,39,1400	1/1:14,9:24:3.01:89,3,0	1/1:8,5:13:3.01:89,3,0	1/1:13,10:22:8.60:268,9,0	1/1:10,11:22:12.51:339,13,0	0/0:22,0:26:15.29:0,15,1310	0/0:18,0:18:27.08:0,27,976	0/0:9,0:8:12.04:0,12,448
chr10	78171687	.	TGTGTGC	T	1593.96	PASS	AB=0.975;AC=17;AF=0.304;AN=56;BaseQRankSum=12.957;DP=595;FS=0.971;HRun=0;HaplotypeScore=162.2394;InbreedingCoeff=-0.4349;MQ=52.30;MQ0=19;MQRankSum=-10.572;QD=4.61;ReadPosRankSum=9.332;VQSLOD=1.4532;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:55:77.51:0,78,2537	0/1:8,0:8:32.48:35,0,32	0/0:17,0:7:10.83:0,11,105	0/0:16,0:11:32.38:0,32,253	0/0:20,0:20:31.40:0,31,206	0/1:24,0:23:83.93:148,0,84	0/1:25,0:25:87.64:88,0,108	0/0:24,0:22:64.16:0,64,632	0/1:20,0:19:94.92:139,0,95	0/1:26,0:26:99:147,0,200	0/1:8,0:8:16.35:16,0,33	0/1:37,0:36:99:166,0,181	0/1:18,0:17:67.05:131,0,67	0/1:23,0:23:69.94:126,0,70	0/1:24,0:24:99:157,0,107	0/1:24,0:24:99:197,0,161	0/1:18,0:18:70.58:71,0,95	0/1:7,18:25:26.11:144,0,26	0/0:14,0:13:35.23:0,35,422	0/0:16,0:16:33.03:0,33,720	0/0:40,0:38:71.82:0,72,1189	0/1:15,0:15:20.48:20,0,32	0/1:12,0:12:11.54:12,0,87	0/1:19,0:18:30.96:73,0,31	0/1:20,0:20:78.37:86,0,78	0/0:21,0:20:55.31:0,55,909	0/0:15,0:14:30.44:0,30,705	0/0:9,0:7:20.90:0,21,308
chr10	78172706	.	AT	A	10797.64	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.089;DP=602;FS=3.689;HRun=11;HaplotypeScore=64.9846;InbreedingCoeff=0.9611;MQ=73.79;MQ0=1;MQRankSum=-1.337;QD=19.42;ReadPosRankSum=2.915;VQSLOD=6.0879;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.09:0,42,441	1/1:0,7:8:23.01:178,23,0	0/0:19,0:16:20.93:0,21,171	0/0:10,0:9:6.44:0,6,46	1/1:4,34:38:89.85:739,90,0	1/1:2,22:25:38.97:516,39,0	1/1:2,14:16:41.95:345,42,0	1/1:11,32:43:92.80:754,93,0	1/1:2,21:23:62.92:517,63,0	1/1:4,23:27:68.88:560,69,0	1/1:5,19:25:27.11:415,27,0	1/1:3,15:18:41.94:345,42,0	1/1:3,13:16:38.95:320,39,0	1/1:3,17:20:47.92:394,48,0	1/1:2,21:23:59.93:493,60,0	1/1:4,15:19:41.93:345,42,0	1/1:4,16:20:44.91:369,45,0	1/1:1,0:18:30.55:88,31,0	1/1:8,16:25:49.97:400,50,0	1/1:0,23:23:65.87:536,66,0	1/1:1,16:17:47.94:394,48,0	1/1:5,12:17:35.94:296,36,0	1/1:3,22:25:56.93:468,57,0	1/1:3,13:16:38.95:320,39,0	1/1:0,12:12:29.97:246,30,0	1/1:3,32:35:95.85:784,96,0	1/1:3,23:27:70.95:572,71,0	1/1:1,17:19:35.32:404,35,0
chr10	78174486	.	TTCTC	T	889.47	PASS	AB=0.908;AC=29;AF=0.604;AN=48;BaseQRankSum=0.950;DP=521;FS=44.850;HRun=0;HaplotypeScore=100.0594;InbreedingCoeff=0.3879;MQ=70.60;MQ0=24;MQRankSum=-0.625;QD=3.13;ReadPosRankSum=3.736;VQSLOD=-0.1223;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:21:10.93:58,11,0	0/1:9,0:5:16.89:17,0,64	./.	./.	./.	1/1:17,0:17:5.93:40,6,0	0/1:14,3:17:28.73:58,0,29	0/0:47,0:45:8.24:0,8,49	1/1:13,3:16:9.03:139,9,0	0/0:22,0:22:21.03:0,21,301	0/0:17,0:17:6.49:0,6,132	0/1:12,0:12:15.72:40,0,16	0/1:13,1:14:23.08:62,0,23	0/0:15,0:15:6.91:0,7,116	0/0:19,0:19:15.02:0,15,236	1/1:11,5:17:6.01:74,6,0	0/1:13,2:16:0.40:109,0,0	./.	1/1:25,0:21:10.71:44,11,0	1/1:24,0:21:10.90:49,11,0	1/1:19,0:16:8.04:33,8,0	1/1:10,3:13:6.02:92,6,0	1/1:14,0:17:8.50:73,8,0	1/1:17,1:17:8.89:107,9,0	1/1:11,1:11:5.91:38,6,0	0/0:18,0:17:21.06:0,21,371	1/1:14,0:13:5.42:23,5,0	0/0:14,0:12:3.01:0,3,52
chr10	78174504	.	CTCT	C	1715.09	PASS	AB=0.619;AC=9;AF=0.161;AN=56;BaseQRankSum=7.111;DP=537;FS=13.869;HRun=0;HaplotypeScore=91.3116;InbreedingCoeff=0.7865;MQ=52.67;MQ0=48;MQRankSum=-1.291;QD=14.17;ReadPosRankSum=4.318;VQSLOD=2.2874;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:26.44:0,26,375	0/0:14,0:9:26.98:0,27,365	0/0:12,0:4:10.24:0,10,99	0/0:22,0:10:21.45:0,21,247	0/0:18,0:17:36.09:0,36,430	0/0:25,0:25:57.08:0,57,703	0/0:24,0:24:45.35:0,45,626	1/1:11,0:36:36.89:828,37,0	0/0:15,0:14:8.93:0,9,282	0/0:19,0:19:57.19:0,57,898	0/0:14,0:13:24.06:0,24,369	0/0:17,0:17:34.09:0,34,496	0/0:20,0:19:38.24:0,38,631	0/0:14,0:14:35.99:0,36,510	0/0:22,0:21:48.63:0,49,725	0/0:22,0:22:28.62:0,29,501	0/0:19,0:16:16.23:0,16,374	0/0:16,0:16:45.14:0,45,570	1/1:4,15:15:42.09:567,42,0	1/1:4,18:19:14.07:211,14,0	0/1:10,15:18:23.33:156,0,23	0/0:14,0:14:8.54:0,9,214	0/0:17,0:16:20.64:0,21,251	0/0:22,0:21:32.05:0,32,504	0/0:16,0:15:31.48:0,31,397	0/0:15,0:14:42.14:0,42,729	1/1:5,9:9:6.02:110,6,0	0/0:11,0:5:15.05:0,15,211
chr10	78175434	.	A	AAG	26076.36	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-10.595;DP=679;FS=0.508;HRun=0;HaplotypeScore=66.1117;InbreedingCoeff=0.9956;MQ=84.25;MQ0=5;MQRankSum=-8.019;QD=42.75;ReadPosRankSum=4.990;VQSLOD=6.3755;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.12:0,66,859	1/1:2,7:9:21.07:370,21,0	0/0:21,0:21:42.13:0,42,563	0/0:26,0:26:62.25:0,62,811	1/1:1,24:25:69.24:1200,69,0	1/1:3,26:29:69.24:1215,69,0	1/1:4,19:24:45.15:793,45,0	1/1:4,26:30:78.16:1158,78,0	1/1:0,26:25:69.24:1215,69,0	1/1:6,29:35:84.26:1416,84,0	1/1:0,24:23:63.13:1024,63,0	1/1:3,21:24:63.22:1100,63,0	1/1:1,24:27:66.23:1151,66,0	1/1:4,29:32:72.25:1265,72,0	1/1:2,21:23:51.17:897,51,0	1/1:1,31:33:87.30:1532,87,0	1/1:0,18:17:42.14:740,42,0	1/1:0,16:16:45.15:792,45,0	1/1:4,23:28:81.19:1256,81,0	1/1:1,34:35:99:1646,99,0	1/1:1,16:17:36.12:634,36,0	1/1:1,25:26:75.17:1274,75,0	1/1:1,16:18:42.14:736,42,0	1/1:0,23:23:51.17:898,51,0	1/1:1,17:16:42.14:739,42,0	1/1:2,31:34:96.31:1654,96,0	1/1:5,24:29:60.21:1057,60,0	1/1:0,6:6:18.06:317,18,0
chr10	78175777	.	TCATACACA	T	1753.61	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=1.495;DP=484;FS=2.102;HRun=0;HaplotypeScore=132.6864;InbreedingCoeff=-0.1075;MQ=69.78;MQ0=11;MQRankSum=-2.263;QD=7.16;ReadPosRankSum=-0.912;VQSLOD=2.5929;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:62.71:0,63,802	0/1:15,0:15:8.25:8,0,183	0/0:23,0:19:33.19:0,33,487	0/0:31,0:24:61.79:0,62,667	0/1:11,0:11:18.45:18,0,106	0/0:12,0:12:26.88:0,27,209	0/0:12,0:12:26.96:0,27,221	1/1:19,0:19:53.91:467,54,0	0/1:21,0:20:29.54:30,0,284	0/0:24,0:23:2.48:0,2,358	0/0:12,0:12:23.78:0,24,195	0/1:21,0:21:99:121,0,161	0/0:16,0:16:1.11:0,1,244	0/1:18,0:17:42.48:42,0,200	0/0:14,0:14:26.96:0,27,223	0/1:16,0:16:46.53:47,0,154	0/1:21,0:20:12.56:13,0,135	1/1:3,12:14:5.99:106,6,0	0/1:17,0:16:99:258,0,206	0/1:13,0:13:98.10:209,0,98	0/1:25,0:23:99:274,0,163	0/0:9,0:9:23.97:0,24,199	0/0:17,0:17:26.82:0,27,208	0/0:23,0:23:40.47:0,40,319	0/1:20,0:19:91.90:127,0,92	0/0:15,0:14:33.05:0,33,668	0/1:13,0:12:99:198,0,130	0/0:4,0:4:12:0,12,232
chr10	78175780	.	TACACACACACACACACACACACAC	T	2930.40	PASS	AB=0.791;AC=18;AF=0.375;AN=48;BaseQRankSum=5.729;DP=502;FS=7.658;HRun=0;HaplotypeScore=256.5581;InbreedingCoeff=0.2369;MQ=66.80;MQ0=15;MQRankSum=-5.060;QD=13.08;ReadPosRankSum=-0.463;VQSLOD=0.8173;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:20.51:0,21,1685	0/1:12,0:15:72.40:72,0,210	./.	0/0:29,0:22:3.01:0,3,56	0/1:7,0:14:78.47:78,0,104	./.	1/1:10,0:10:3.01:62,3,0	0/0:21,0:21:9.01:0,9,189	1/1:16,6:21:6.02:373,6,0	0/1:18,0:24:54.91:55,0,423	0/0:10,0:10:3.01:0,3,43	1/1:9,12:21:12.93:749,13,0	1/1:14,6:19:2.70:186,3,0	0/1:12,0:17:99:157,0,160	0/0:16,0:15:3.01:0,3,46	1/1:8,8:16:6.02:373,6,0	0/1:12,8:19:57.60:178,0,58	0/0:16,0:14:6.02:0,6,298	0/0:23,0:22:31.90:0,32,1724	0/0:14,0:14:15.05:0,15,1180	0/0:32,0:29:25.64:0,26,2052	./.	./.	0/1:22,0:22:13.45:57,0,13	1/1:10,11:20:12.04:747,12,0	0/0:13,0:12:20.99:0,21,1322	0/0:14,0:13:18.06:0,18,1323	0/0:4,0:4:8.39:0,8,610
chr10	78178989	.	GA	G	9665.81	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.221;DP=647;FS=6.095;HRun=1;HaplotypeScore=62.4593;InbreedingCoeff=0.9994;MQ=85.78;MQ0=0;MQRankSum=-2.601;QD=38.20;ReadPosRankSum=5.094;VQSLOD=5.2695;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.23:0,81,1262	0/0:13,0:13:39.13:0,39,620	0/0:22,0:22:66.12:0,66,961	0/0:24,0:24:67.44:0,67,1013	0/0:25,0:25:75.24:0,75,1173	1/1:0,24:24:63.21:881,63,0	1/1:0,26:26:60.20:839,60,0	0/0:31,0:31:93.32:0,93,1478	1/1:0,23:23:63.21:881,63,0	0/0:28,0:28:81.27:0,81,1268	0/0:34,0:34:99:0,99,1556	1/1:0,18:18:54.18:755,54,0	1/1:0,26:26:69.06:963,69,0	0/0:33,0:33:96.33:0,96,1531	0/0:26,0:26:78.27:0,78,1245	1/1:0,23:23:60.20:839,60,0	1/1:0,20:20:60.20:839,60,0	0/0:12,0:12:36.08:0,36,537	0/0:19,0:19:57.16:0,57,856	0/0:22,0:22:66.21:0,66,1019	0/0:31,0:31:93.27:0,93,1437	1/1:0,32:32:93.31:1300,93,0	1/1:0,17:17:45.11:606,45,0	1/1:0,22:22:63.21:881,63,0	1/1:0,22:22:63.21:881,63,0	0/0:26,0:26:78.27:0,78,1247	0/0:14,0:14:39.12:0,39,597	0/0:7,0:7:21.07:0,21,335
chr10	78179184	.	CTTT	C	1430.14	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.806;DP=775;FS=1.324;HRun=8;HaplotypeScore=104.5753;InbreedingCoeff=0.9901;MQ=74.94;MQ0=0;MQRankSum=0.698;QD=34.05;ReadPosRankSum=1.099;VQSLOD=2.8192;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.31:0,90,1948	0/0:8,0:8:24.08:0,24,524	0/0:26,0:26:57.12:0,57,1459	0/0:15,0:15:36.59:0,37,736	0/0:34,0:34:96.33:0,96,2094	0/0:26,0:25:78.27:0,78,1686	0/0:27,0:27:78.27:0,78,1703	0/0:48,0:48:99:0,129,2709	0/0:32,0:32:87.28:0,87,1858	0/0:47,0:47:99:0,126,2700	0/0:24,0:24:69.23:0,69,1466	0/0:28,0:28:78.27:0,78,1701	0/0:34,0:34:90.31:0,90,1953	0/0:32,0:32:87.30:0,87,1899	0/0:27,0:27:81.28:0,81,1767	0/0:28,0:28:75.26:0,75,1637	0/0:20,0:20:51.18:0,51,1113	0/0:11,0:11:27.09:0,27,589	0/0:27,0:27:81.28:0,81,1767	0/0:35,0:35:99:0,102,2150	0/0:26,0:27:81.26:0,81,1687	0/0:28,0:28:78.27:0,78,1703	0/0:40,0:40:99:0,117,2548	0/0:24,0:24:66.23:0,66,1424	0/0:22,0:22:60.21:0,60,1295	1/1:3,32:36:55.43:1327,55,0	0/0:30,0:30:78.27:0,78,1697	1/1:0,6:6:15.05:221,15,0
chr10	78179872	.	CA	C	1956.87	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.519;DP=726;FS=0.000;HRun=1;HaplotypeScore=79.4698;InbreedingCoeff=0.9993;MQ=96.54;MQ0=0;MQRankSum=-1.934;QD=36.92;ReadPosRankSum=-0.579;VQSLOD=3.6167;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1626	0/0:11,0:11:33.11:0,33,526	0/0:34,0:34:98.66:0,99,1458	0/0:35,0:35:99:0,105,1598	0/0:33,0:33:99:0,99,1529	0/0:27,0:27:81.28:0,81,1292	0/0:16,0:16:48.16:0,48,765	0/0:30,0:30:90.28:0,90,1376	0/0:23,0:23:69.22:0,69,1076	0/0:36,0:36:99:0,105,1678	0/0:18,0:18:48.16:0,48,767	0/0:23,0:23:69.22:0,69,1079	0/0:30,0:30:87.28:0,87,1368	0/0:20,0:20:60.20:0,60,959	0/0:26,0:26:78.27:0,78,1247	0/0:33,0:33:99:0,99,1577	0/0:19,0:19:57.18:0,57,887	0/0:10,0:10:27.09:0,27,430	0/0:15,0:15:42.14:0,42,671	0/0:35,0:35:99:0,102,1554	0/0:25,0:25:75.22:0,75,1148	0/0:27,0:27:81.28:0,81,1294	0/0:21,0:21:63.21:0,63,1004	0/0:32,0:32:96.31:0,96,1508	0/0:31,0:31:90.26:0,90,1388	1/1:0,31:31:93.29:1282,93,0	0/0:28,0:28:84.29:0,84,1332	1/1:0,22:22:57.19:797,57,0
chr10	78179978	.	TC	T	632.21	PASS	AB=0.619;AC=3;AF=0.054;AN=56;BaseQRankSum=-6.457;DP=664;FS=0.000;HRun=9;HaplotypeScore=108.7260;InbreedingCoeff=0.6393;MQ=81.68;MQ0=1;MQRankSum=-1.966;QD=17.09;ReadPosRankSum=-0.908;VQSLOD=2.9589;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:27:53.78:0,54,858	0/0:10,0:10:26.71:0,27,183	0/0:19,0:18:33.07:0,33,359	0/0:26,0:26:32.61:0,33,564	0/0:24,0:24:66.88:0,67,463	0/0:38,0:38:97.90:0,98,634	0/0:20,0:20:54.90:0,55,334	0/0:37,0:37:77.48:0,77,429	0/0:16,0:16:34.10:0,34,221	0/0:25,0:25:58.94:0,59,331	0/0:24,0:24:60.45:0,60,364	0/0:19,0:19:46.14:0,46,309	0/0:27,0:27:74.76:0,75,483	0/0:24,0:24:57.68:0,58,369	0/0:22,0:22:59.85:0,60,379	0/0:28,0:28:79.67:0,80,508	0/0:31,0:31:80.11:0,80,515	0/0:5,0:5:14.78:0,15,95	0/0:14,0:14:37.69:0,38,225	0/0:38,0:38:93.43:0,93,645	0/0:21,0:21:53.68:0,54,338	0/0:41,0:41:99:0,111,733	0/0:18,0:18:48.81:0,49,327	0/0:26,0:26:56.93:0,57,336	0/0:21,0:21:50.45:0,50,301	1/1:4,20:23:60.03:549,60,0	0/0:26,0:26:72.75:0,73,492	0/1:5,8:13:39.22:190,0,39
chr10	78180583	.	CTCT	C	21382.36	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=5.421;DP=550;FS=2.261;HRun=0;HaplotypeScore=149.4077;InbreedingCoeff=0.9879;MQ=71.96;MQ0=0;MQRankSum=-5.932;QD=42.09;ReadPosRankSum=4.442;VQSLOD=6.3579;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.11:0,39,748	1/1:0,12:12:36.08:598,36,0	0/0:14,0:14:16.42:0,16,399	0/0:15,0:14:27.05:0,27,402	1/1:0,22:23:63.03:944,63,0	1/1:1,24:25:66.23:1127,66,0	1/1:0,16:16:33.07:535,33,0	1/1:4,37:41:99:1760,106,0	1/1:0,14:14:36.12:621,36,0	1/1:1,27:28:78.25:1309,78,0	1/1:0,19:19:57.15:965,57,0	1/1:0,20:20:42.14:734,42,0	1/1:0,26:26:66.09:1145,66,0	1/1:0,19:19:54.18:945,54,0	1/1:0,16:16:45.15:778,45,0	1/1:2,31:33:78.27:1349,78,0	1/1:1,18:19:45.11:758,45,0	1/1:0,8:8:21.07:367,21,0	1/1:1,20:21:60.59:934,61,0	1/1:0,25:25:72.12:1131,72,0	1/1:0,18:18:39.09:652,39,0	1/1:1,17:18:51.03:793,51,0	1/1:0,15:15:39.04:612,39,0	1/1:0,17:17:30.06:485,30,0	1/1:1,19:20:54.18:930,54,0	1/1:0,0:26:78.15:805,78,0	1/1:1,23:24:54.05:944,54,0	1/1:0,0:5:15.04:159,15,0
chr10	78181021	.	GACCACTCTGTATAATC	G	46110.65	PASS	AB=0.906;AC=47;AF=0.839;AN=56;BaseQRankSum=15.513;DP=719;FS=4.248;HRun=0;HaplotypeScore=333.0309;InbreedingCoeff=0.8459;MQ=86.27;MQ0=0;MQRankSum=-16.388;QD=77.76;ReadPosRankSum=6.598;VQSLOD=3.4838;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,10100	1/1:0,18:18:42.14:1896,42,0	0/0:34,0:34:90.31:0,90,5945	0/0:34,0:34:89.95:0,90,4764	1/1:2,18:20:41.99:1453,42,0	1/1:4,25:29:39.13:1824,39,0	1/1:3,19:22:30.10:1401,30,0	1/1:4,19:23:53.94:1439,54,0	1/1:2,31:33:66.23:3101,66,0	1/1:4,27:32:75.67:3182,76,0	1/1:3,15:18:36:1460,36,0	1/1:4,28:32:72.25:3402,72,0	1/1:4,21:25:51.18:2404,51,0	1/1:4,37:42:99:4590,102,0	1/1:3,21:25:45.15:2106,45,0	1/1:3,18:21:30.10:1320,30,0	1/1:1,7:8:9.03:425,9,0	1/1:3,14:17:12.04:466,12,0	1/1:5,16:21:48.03:1558,48,0	1/1:7,19:26:51.11:1922,51,0	1/1:8,22:29:20.12:521,20,0	1/1:0,22:22:51.09:1911,51,0	1/1:3,26:29:66.23:2578,66,0	1/1:1,17:18:33.08:1559,33,0	1/1:3,18:21:45.15:2097,45,0	0/1:26,3:29:99:199,0,5926	1/1:2,29:32:71.89:3296,72,0	0/0:11,0:11:33.07:0,33,2172
chr10	78181391	.	G	GA	14471.04	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-11.919;DP=629;FS=3.855;HRun=7;HaplotypeScore=57.3005;InbreedingCoeff=0.9958;MQ=83.71;MQ0=0;MQRankSum=-2.770;QD=30.40;ReadPosRankSum=-0.074;VQSLOD=5.1429;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,120,1159	1/1:1,11:12:24.04:273,24,0	0/0:28,0:29:17.46:0,17,449	0/0:22,0:22:54.07:0,54,519	1/1:0,24:24:69.17:817,69,0	1/1:1,24:25:69.21:834,69,0	1/1:1,16:17:45.14:544,45,0	1/1:6,20:26:56.61:687,57,0	1/1:3,11:14:27.08:326,27,0	1/1:3,20:23:57.17:688,57,0	1/1:1,27:28:78.20:926,78,0	1/1:2,21:23:57.17:688,57,0	1/1:1,22:23:63.19:761,63,0	1/1:4,14:18:42.13:507,42,0	1/1:4,23:27:69.21:833,69,0	1/1:2,23:25:63.19:761,63,0	1/1:4,11:15:33.10:399,33,0	0/0:19,0:19:54.09:0,54,521	1/1:1,16:17:48.14:569,48,0	1/1:5,23:28:72.14:837,72,0	1/1:2,20:22:51.16:616,51,0	1/1:1,21:22:60.18:725,60,0	1/1:0,30:30:77.87:942,78,0	1/1:1,20:21:54.17:652,54,0	1/1:0,18:18:51.16:616,51,0	0/0:31,1:32:47.88:0,48,745	1/1:5,12:18:39.12:471,39,0	0/0:6,0:6:18.03:0,18,174
chr10	78181653	.	C	CTT	1900.91	PASS	AB=0.597;AC=23;AF=0.411;AN=56;BaseQRankSum=13.193;DP=483;FS=3.300;HRun=10;HaplotypeScore=75.2343;InbreedingCoeff=0.7513;MQ=66.77;MQ0=0;MQRankSum=-1.814;QD=7.43;ReadPosRankSum=-0.189;VQSLOD=0.2571;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:16:44.83:0,45,439	1/1:2,0:8:14.97:53,15,0	0/0:5,0:6:5.68:0,6,33	0/0:5,0:4:5.79:0,6,48	1/1:4,0:26:27.39:163,27,0	0/0:21,0:22:47.35:0,47,540	0/0:10,0:10:17.98:0,18,175	1/1:5,0:28:49.83:247,50,0	0/0:18,0:18:48.06:0,48,488	0/1:4,1:20:14.70:130,0,15	1/1:4,0:29:27.39:163,27,0	0/0:18,0:20:56.58:0,57,542	0/0:12,0:12:21.01:0,21,214	0/1:4,0:11:3.54:45,0,4	1/1:4,0:24:41.24:152,41,0	0/0:14,0:15:32.73:0,33,301	0/0:17,0:19:47.54:0,48,442	0/0:21,0:21:48.04:0,48,478	1/1:7,0:12:13.54:85,14,0	1/1:4,0:28:54.33:192,54,0	0/1:4,0:10:31.66:32,0,40	0/0:12,0:12:27.05:0,27,275	0/0:15,0:16:41.82:0,42,409	0/0:12,0:12:21.03:0,21,214	0/0:23,0:23:51.06:0,51,518	1/1:10,1:28:67.32:665,67,0	1/1:3,0:22:37.34:132,37,0	1/1:5,0:8:6.01:57,6,0
chr10	78184165	.	GAA	G	2997.52	PASS	AB=0.705;AC=26;AF=0.464;AN=56;BaseQRankSum=-8.518;DP=626;FS=7.966;HRun=16;HaplotypeScore=102.4454;InbreedingCoeff=0.8093;MQ=77.42;MQ0=7;MQRankSum=1.646;QD=10.90;ReadPosRankSum=-0.268;VQSLOD=2.1525;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:63.45:0,63,777	1/1:2,4:6:14.94:125,15,0	0/0:43,1:23:0.06:0,0,56	0/0:21,0:12:12.66:0,13,75	1/1:3,17:22:41.20:326,41,0	0/0:24,0:24:62.21:0,62,462	0/0:17,0:17:47.89:0,48,385	1/1:15,15:31:55.42:422,55,0	0/0:19,0:19:49.43:0,49,364	1/1:6,16:23:49.83:395,50,0	1/1:5,18:24:52.13:425,52,0	0/0:22,0:23:50.07:0,50,424	0/0:30,0:30:83.31:0,83,709	1/1:4,10:15:6.70:167,7,0	1/1:8,20:29:41.41:378,41,0	0/0:27,0:28:50.81:0,51,447	0/0:22,0:22:50.65:0,51,401	1/1:5,0:12:23.76:101,24,0	1/1:9,7:18:2.16:130,2,0	1/1:9,12:22:15.25:277,15,0	1/1:5,13:18:26.59:225,27,0	0/0:21,0:21:56.41:0,56,423	0/0:22,0:22:40.32:0,40,302	0/0:17,0:17:41.42:0,41,327	0/0:33,0:34:80.24:0,80,624	0/1:15,2:28:4.88:5,0,201	1/1:5,13:19:15.50:230,16,0	0/1:5,0:8:3.58:4,0,28
chr10	78184177	.	A	AG	1180.65	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-1.953;DP=679;FS=1.027;HRun=0;HaplotypeScore=104.3195;InbreedingCoeff=0.5996;MQ=68.28;MQ0=8;MQRankSum=2.796;QD=3.82;ReadPosRankSum=2.298;VQSLOD=3.3818;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:85.93:0,86,937	0/0:10,0:10:29.70:0,30,224	0/1:43,0:15:19:19,0,149	0/0:24,0:13:18.80:0,19,189	0/0:29,0:29:81.17:0,81,597	1/1:23,1:24:27.81:158,28,0	0/1:19,0:19:1.68:65,0,2	0/0:38,0:39:99:0,108,797	0/1:24,0:24:12.12:123,0,12	0/0:29,1:30:47.40:0,47,572	0/0:24,0:24:59.59:0,60,397	1/1:23,0:23:0.42:94,0,0	0/1:31,0:31:33.65:87,0,34	0/0:19,0:19:44.58:0,45,331	0/0:30,0:30:66.73:0,67,495	1/1:26,1:28:19.09:182,19,0	1/1:23,0:23:10.79:91,11,0	0/0:16,0:16:40.87:0,41,267	0/0:19,0:20:46.75:0,47,425	0/0:26,0:26:67.91:0,68,532	0/0:17,0:17:36.48:0,36,252	1/1:20,1:21:11.18:95,11,0	1/1:19,1:20:12.46:150,12,0	0/1:16,0:16:5.68:33,0,6	1/1:37,0:37:50.36:275,50,0	0/0:27,0:27:80.79:0,81,694	0/0:20,0:20:47.37:0,47,332	0/0:8,0:8:20.88:0,21,178
chr10	78184613	.	C	CTT	5957.71	PASS	AB=0.944;AC=35;AF=0.625;AN=56;BaseQRankSum=5.720;DP=647;FS=6.861;HRun=8;HaplotypeScore=94.7598;InbreedingCoeff=0.9227;MQ=70.64;MQ0=2;MQRankSum=-1.924;QD=15.20;ReadPosRankSum=3.065;VQSLOD=2.3284;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,138,1507	1/1:2,11:12:24.08:381,24,0	0/0:18,0:15:14.73:0,15,154	0/0:20,0:15:26.69:0,27,256	1/1:1,23:25:66.06:914,66,0	1/1:1,0:16:32.44:111,32,0	1/1:6,0:21:37.67:164,38,0	0/0:40,0:40:95.80:0,96,1051	1/1:3,0:25:49.91:172,50,0	1/1:6,32:37:87.28:1334,87,0	1/1:3,18:21:51.09:743,51,0	1/1:1,0:18:35.41:121,35,0	1/1:8,0:25:42.85:145,43,0	1/1:2,14:16:33.07:496,33,0	1/1:3,16:20:39.08:572,39,0	1/1:2,0:19:37.43:129,37,0	1/1:5,0:26:44.92:154,45,0	0/0:18,0:18:51.13:0,51,568	0/0:33,0:33:84.19:0,84,921	0/0:30,0:30:69.12:0,69,749	0/0:17,0:17:48.12:0,48,535	1/1:2,1:19:12.69:152,13,0	1/1:1,0:23:42.42:146,42,0	1/1:6,0:12:14.97:52,15,0	1/1:1,0:21:47.41:163,47,0	0/1:32,2:34:8.04:8,0,778	0/0:21,0:21:42.06:0,42,456	0/0:8,0:8:15.03:0,15,167
chr10	78184852	.	G	GAATCAGAACTTCTGGAACTCAACA	108929.15	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=1.032;DP=583;FS=1.754;HRun=0;HaplotypeScore=342.7019;InbreedingCoeff=0.8110;MQ=77.27;MQ0=0;MQRankSum=-14.892;QD=220.95;ReadPosRankSum=1.195;VQSLOD=4.3562;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,7546	1/1:1,3:4:12.04:1092,12,0	0/0:20,0:20:60.20:0,60,2552	0/0:26,0:25:69.19:0,69,2918	1/1:16,6:22:57.16:3818,57,0	1/1:17,5:22:60.21:5558,60,0	1/1:18,1:19:51.05:4236,51,0	1/1:24,0:24:69.21:3566,69,0	1/1:23,10:33:96.32:8019,96,0	1/1:15,12:28:75.26:7506,75,0	1/1:8,7:15:39.13:3753,39,0	1/1:14,12:26:78.27:7941,78,0	1/1:12,7:19:57.20:4880,57,0	1/1:13,10:23:66.23:6238,66,0	1/1:8,10:18:51.18:4854,51,0	1/1:26,13:39:99:9587,117,0	1/1:10,2:12:27.08:2367,27,0	1/1:7,3:10:24.06:2172,24,0	1/1:16,3:19:51.16:3344,51,0	1/1:13,9:23:69.19:5949,69,0	1/1:13,1:14:35.99:1996,36,0	1/1:13,7:20:60.18:5480,60,0	1/1:23,5:28:75.24:5922,75,0	1/1:10,4:14:33.11:2575,33,0	1/1:10,4:14:39.13:3076,39,0	0/1:24,0:24:22.53:23,0,3758	1/1:18,5:23:66.23:4978,66,0	0/0:1,0:1:3.01:0,3,203
chr10	78184905	.	A	AC	24756.86	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=2.334;DP=684;FS=5.317;HRun=0;HaplotypeScore=85.7420;InbreedingCoeff=0.9329;MQ=76.51;MQ0=0;MQRankSum=-10.238;QD=43.59;ReadPosRankSum=1.507;VQSLOD=5.1788;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,1744	1/1:0,7:7:21.07:336,21,0	0/0:25,0:25:72.23:0,72,973	0/0:13,0:13:33.10:0,33,444	1/1:1,28:29:72.25:1149,72,0	1/1:0,20:19:57.19:908,57,0	1/1:1,16:17:48.16:767,48,0	1/1:2,36:38:99:1711,111,0	1/1:0,42:42:99:1902,120,0	1/1:3,19:23:66.22:1024,66,0	1/1:0,18:18:51.17:814,51,0	1/1:2,29:31:78.27:1244,78,0	1/1:0,27:27:81.27:1269,81,0	1/1:1,25:26:72.24:1136,72,0	1/1:1,21:22:57.19:910,57,0	1/1:1,37:38:99:1628,102,0	1/1:2,23:25:66.22:1054,66,0	1/1:1,8:9:21.07:335,21,0	1/1:4,22:26:66.21:1010,66,0	1/1:1,19:20:57.19:906,57,0	1/1:0,27:27:75.26:1197,75,0	1/1:0,24:25:72.25:1148,72,0	1/1:0,29:29:78.27:1245,78,0	1/1:1,21:22:60.20:958,60,0	1/1:0,23:23:63.21:1005,63,0	0/0:30,2:32:1.72:0,2,1164	1/1:0,24:24:69.24:1101,69,0	0/0:3,0:3:9.03:0,9,126
chr10	78186358	.	CTGTG	C	1440.03	PASS	AB=0.831;AC=17;AF=0.315;AN=54;BaseQRankSum=-4.529;DP=834;FS=17.791;HRun=0;HaplotypeScore=165.5673;InbreedingCoeff=0.4962;MQ=55.78;MQ0=25;MQRankSum=0.004;QD=4.98;ReadPosRankSum=2.562;VQSLOD=1.7659;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,6:35:26.68:300,27,0	1/1:11,0:11:2.99:24,3,0	0/0:25,0:11:0:0,0,0	./.	1/1:12,8:20:9.03:140,9,0	0/0:29,0:27:7.24:0,7,732	0/0:27,0:27:24.52:0,25,469	0/0:26,0:25:6.49:0,6,91	0/0:37,0:37:41.93:0,42,701	1/1:24,0:24:0.93:40,1,0	1/1:9,7:16:6.02:93,6,0	0/0:30,0:31:35.27:0,35,680	0/0:38,0:40:45.13:0,45,879	0/1:33,15:48:1.20:219,0,1	1/1:23,22:47:27.52:394,28,0	0/0:31,0:32:39.13:0,39,878	0/0:13,0:22:20.80:0,21,373	0/1:12,12:24:29.55:346,0,30	0/1:20,0:20:2.28:2,0,164	0/0:15,0:20:21.05:0,21,386	0/0:74,0:72:49.19:0,49,978	0/0:29,0:29:39.13:0,39,821	0/0:19,0:21:23.78:0,24,473	0/0:47,0:48:48.95:0,49,979	0/0:26,0:26:33.11:0,33,712	0/1:28,0:27:9.69:10,0,64	0/0:13,0:21:20.79:0,21,359	0/1:9,1:14:36.56:38,0,37
chr10	78186402	.	GTA	G	2622.95	PASS	AB=0.987;AC=12;AF=0.214;AN=56;BaseQRankSum=-8.014;DP=667;FS=21.187;HRun=0;HaplotypeScore=115.9649;InbreedingCoeff=-0.0836;MQ=63.79;MQ0=14;MQRankSum=1.951;QD=8.57;ReadPosRankSum=0.572;VQSLOD=1.9708;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:75.79:0,76,535	0/0:8,0:8:23.94:0,24,192	0/0:22,0:13:20.83:0,21,248	0/0:26,0:16:30.95:0,31,314	0/0:15,0:14:25.11:0,25,160	0/1:24,0:23:20.72:179,0,21	1/1:39,1:40:3.82:657,4,0	0/0:28,0:27:71.86:0,72,610	0/1:23,4:27:26.43:330,0,26	0/0:16,0:16:43.04:0,43,357	0/0:12,0:12:17.17:0,17,118	0/1:25,0:25:9.18:166,0,9	0/1:27,0:27:56.15:204,0,56	0/0:31,0:30:52.49:0,52,356	0/0:46,0:46:81.11:0,81,572	0/1:27,0:27:91.38:271,0,91	0/1:16,0:16:10.49:113,0,10	0/0:17,0:17:32.45:0,32,170	0/0:8,0:8:17.74:0,18,142	0/0:18,0:17:30:0,30,301	0/0:33,0:33:59.20:0,59,808	0/1:28,0:27:35.64:181,0,36	0/1:12,0:12:38.83:39,0,94	0/1:51,0:50:64.09:420,0,64	0/1:29,0:29:69.92:214,0,70	0/0:16,0:16:35.97:0,36,287	0/0:21,0:21:35.78:0,36,401	0/0:13,0:12:8.53:0,9,100
chr10	78189279	.	A	AAC	5553.44	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-2.905;DP=731;FS=6.995;HRun=0;HaplotypeScore=91.8026;InbreedingCoeff=0.9986;MQ=67.14;MQ0=7;MQRankSum=-1.271;QD=41.44;ReadPosRankSum=2.873;VQSLOD=6.4065;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:63.18:0,63,767	1/1:0,11:11:30.10:492,30,0	0/0:34,0:17:26.70:0,27,269	0/0:44,0:30:52.03:0,52,572	1/1:3,22:25:66.23:1082,66,0	0/0:27,0:27:72.66:0,73,867	0/0:13,0:13:33.10:0,33,409	0/0:36,0:35:84.16:0,84,1008	0/0:30,0:30:78.25:0,78,966	1/1:1,24:25:35.04:1095,35,0	1/1:1,22:24:63.21:1020,63,0	0/0:33,0:33:90.25:0,90,1078	0/0:28,0:28:66.17:0,66,791	1/1:3,18:21:45.15:738,45,0	1/1:3,24:28:69.24:1126,69,0	0/0:30,0:31:75.05:0,75,892	0/0:31,0:31:84.22:0,84,1011	0/0:21,0:21:39.88:0,40,617	0/0:26,0:25:66.13:0,66,785	0/0:30,0:31:87.10:0,87,1054	0/0:32,0:32:69.18:0,69,828	0/0:18,0:18:51.16:0,51,629	0/0:15,0:15:39.12:0,39,483	0/0:23,0:24:29:0,29,571	0/0:30,0:30:75.22:0,75,918	0/0:29,0:29:75.23:0,75,920	0/0:25,0:25:60.02:0,60,721	0/0:9,0:9:21.06:0,21,260
chr10	78190629	.	AATTCATTCATTCATTC	A	12173.64	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.184;DP=734;FS=4.271;HRun=0;HaplotypeScore=337.3449;InbreedingCoeff=0.9785;MQ=69.18;MQ0=0;MQRankSum=-13.761;QD=65.10;ReadPosRankSum=1.036;VQSLOD=3.7058;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:81.28:0,81,5665	1/1:5,6:11:15.05:664,15,0	0/0:22,0:20:15.04:0,15,442	0/0:17,0:14:9.03:0,9,305	1/1:12,34:46:84.16:3105,84,0	0/0:20,0:19:42.13:0,42,2776	0/0:22,0:22:48.15:0,48,3216	0/0:35,0:35:54.19:0,54,3295	0/0:24,0:24:57.20:0,57,4192	1/1:12,26:38:67.76:2475,68,0	1/1:9,20:29:48.11:1878,48,0	0/0:9,0:26:54.17:0,54,3341	0/0:14,0:32:72.25:0,72,4630	1/1:7,15:22:33.11:1396,33,0	1/1:16,25:41:60.21:2656,60,0	0/0:27,0:27:78.27:0,78,5380	0/0:19,0:18:36.12:0,36,2426	0/0:3,0:6:15.05:0,15,911	0/0:30,0:30:39.13:0,39,2667	0/0:45,0:45:99:0,105,7133	0/0:21,0:21:54.19:0,54,3271	0/0:13,0:28:66.23:0,66,4178	0/0:8,0:29:62.24:0,62,4168	0/0:16,0:30:66.23:0,66,3882	0/0:25,0:25:48.16:0,48,3351	0/0:7,0:24:60.20:0,60,4037	0/0:20,0:20:57.20:0,57,4252	0/0:3,0:10:30.10:0,30,1857
chr10	78192655	.	A	ACT	6592.04	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-13.207;DP=690;FS=7.898;HRun=0;HaplotypeScore=76.4404;InbreedingCoeff=0.9975;MQ=91.05;MQ0=0;MQRankSum=-2.244;QD=46.75;ReadPosRankSum=4.593;VQSLOD=6.1987;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.18:0,63,859	1/1:0,7:7:21.07:378,21,0	0/0:33,0:32:86.42:0,86,1176	0/0:24,0:24:59.97:0,60,754	1/1:2,25:27:66.23:1187,66,0	0/0:35,0:35:99:0,99,1331	0/0:19,0:19:54.13:0,54,703	0/0:39,0:39:99:0,111,1511	0/0:26,0:26:72.23:0,72,985	1/1:2,26:29:72.24:1261,72,0	1/1:2,22:25:69.24:1228,69,0	0/0:28,0:28:72.24:0,72,1008	0/0:20,0:20:57.17:0,57,778	1/1:1,22:23:63.22:1134,63,0	1/1:1,28:30:78.27:1404,78,0	0/0:31,0:31:87.26:0,87,1184	0/0:22,0:22:63.18:0,63,861	0/0:19,0:19:54.18:0,54,750	0/0:31,0:31:87.27:0,87,1186	0/0:19,0:19:51.16:0,51,697	0/0:26,0:26:75.20:0,75,989	0/0:17,0:17:51.15:0,51,695	0/0:24,0:24:66.19:0,66,885	0/0:18,0:18:48.14:0,48,652	0/0:26,0:26:78.24:0,78,1071	0/0:28,1:29:33.70:0,34,1122	0/0:35,0:35:99:0,102,1406	0/0:6,0:6:18.06:0,18,252
chr10	78192886	.	TTGTGTGTGTGTGTGTG	T	11237.82	PASS	AB=0.571;AC=21;AF=0.375;AN=56;BaseQRankSum=7.934;DP=651;FS=1.592;HRun=0;HaplotypeScore=248.5526;InbreedingCoeff=0.8289;MQ=57.16;MQ0=10;MQRankSum=-9.433;QD=47.02;ReadPosRankSum=3.660;VQSLOD=4.0906;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:84.29:0,84,4995	0/0:11,0:11:5.70:0,6,211	0/0:28,0:11:3:0,3,27	0/0:22,0:12:12.04:0,12,384	0/0:20,0:32:11.54:0,12,181	1/1:12,17:29:36.06:1418,36,0	1/1:10,10:20:27.09:1160,27,0	0/0:37,0:37:60.18:0,60,2510	1/1:4,11:15:24.08:1021,24,0	0/0:28,0:27:48.64:0,49,2466	0/0:11,0:20:12.03:0,12,416	1/1:3,16:19:30.10:1329,30,0	1/1:3,20:24:48.12:1951,48,0	0/0:10,0:26:23.19:0,23,1121	0/0:10,0:29:14.58:0,15,475	1/1:6,13:18:20.74:889,21,0	0/1:4,12:16:76.28:127,0,76	0/0:14,0:22:28.38:0,28,1093	0/0:17,0:17:27.09:0,27,1186	0/0:9,0:20:26.12:0,26,1359	0/0:9,0:26:24.08:0,24,1545	1/1:7,11:18:18.02:639,18,0	1/1:8,23:31:20.34:855,20,0	1/1:8,9:17:8.50:398,9,0	1/1:7,23:31:36.12:1451,36,0	0/0:25,0:28:55.68:0,56,2634	0/0:7,0:22:20.10:0,20,1207	0/0:2,0:2:3.01:0,3,229
chr10	78192924	.	GTATGCAGATGCACA	G	97.18	PASS	AB=0.875;AC=2;AF=0.036;AN=56;BaseQRankSum=-0.906;DP=611;FS=4.424;HRun=0;HaplotypeScore=257.2522;InbreedingCoeff=-0.0579;MQ=53.30;MQ0=12;MQRankSum=-2.693;QD=1.94;ReadPosRankSum=-4.903;VQSLOD=1.7559;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:63.03:0,63,3258	0/0:6,0:6:5.58:0,6,251	0/0:29,0:10:30:0,30,1444	0/0:36,0:17:51.17:0,51,2659	0/0:24,0:24:32.52:0,33,1869	0/0:22,0:22:42.14:0,42,1261	0/0:21,0:21:54.18:0,54,2122	0/1:20,0:19:23.08:23,0,1920	0/0:17,0:17:39.13:0,39,1375	0/1:20,10:29:99:162,0,2931	0/0:14,0:14:21.24:0,21,1290	0/0:24,0:24:51.17:0,51,1873	0/0:28,0:28:69.24:0,69,2182	0/0:22,0:22:31.38:0,31,1717	0/0:22,0:22:24.08:0,24,1461	0/0:19,0:19:33.11:0,33,1154	0/0:20,0:20:19.73:0,20,1069	0/0:16,0:16:25.81:0,26,1313	0/0:12,0:9:0.23:0,0,1320	0/0:17,0:17:45.15:0,45,2312	0/0:30,0:30:53.21:0,53,2667	0/0:18,0:18:36.12:0,36,1594	0/0:32,0:32:41.77:0,42,1682	0/0:24,0:23:27.30:0,27,1205	0/0:33,0:33:63.22:0,63,2419	0/0:24,0:24:58.79:0,59,3864	0/0:18,0:18:30.10:0,30,1421	0/0:2,0:1:3.01:0,3,214
chr10	78193181	.	CTTTT	C	11774.15	PASS	AB=0.587;AC=43;AF=0.768;AN=56;BaseQRankSum=2.776;DP=627;FS=0.496;HRun=13;HaplotypeScore=142.4060;InbreedingCoeff=0.6450;MQ=62.92;MQ0=1;MQRankSum=-4.378;QD=21.41;ReadPosRankSum=5.395;VQSLOD=2.6954;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:23:63.04:0,63,1191	1/1:2,0:8:11.94:95,12,0	0/0:14,0:12:19.24:0,19,242	0/0:10,0:8:16.58:0,17,205	1/1:3,0:23:35.20:269,35,0	1/1:5,27:32:69.20:999,69,0	1/1:2,21:24:57.16:814,57,0	0/1:11,1:25:30.02:54,0,30	1/1:4,24:28:63.18:921,63,0	1/1:2,0:22:49.64:386,50,0	1/1:3,0:21:46.89:365,47,0	1/1:1,19:20:45.15:658,45,0	1/1:4,18:22:5.07:574,5,0	1/1:2,0:23:41.88:335,42,0	1/1:1,0:34:83.80:669,84,0	1/1:1,25:26:56.99:834,57,0	1/1:2,24:26:57.17:834,57,0	1/1:3,13:16:33.07:475,33,0	0/1:4,0:22:23.56:51,0,24	1/1:5,2:25:26.31:142,26,0	1/1:4,0:18:12.90:36,13,0	1/1:5,28:33:75.12:1096,75,0	1/1:0,24:24:59.96:878,60,0	1/1:2,18:20:42.13:615,42,0	1/1:5,16:21:45.09:638,45,0	0/0:13,0:27:54.12:0,54,707	0/1:9,0:35:18.26:36,0,18	0/0:0,0:2:6.02:0,6,74
chr10	78194798	.	CTAGCATTGTT	C	13160.83	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=17.031;DP=715;FS=6.244;HRun=0;HaplotypeScore=209.4313;InbreedingCoeff=0.9992;MQ=85.17;MQ0=0;MQRankSum=-17.021;QD=54.61;ReadPosRankSum=1.940;VQSLOD=4.1695;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,6253	0/0:11,0:11:33.11:0,33,1700	0/0:21,0:21:57.18:0,57,2467	0/0:31,0:31:90.27:0,90,3672	0/0:28,0:28:78.27:0,78,3959	1/1:3,13:16:24.08:782,24,0	1/1:3,15:18:33.11:1051,33,0	0/0:34,0:33:93.32:0,93,4489	1/1:1,16:17:33.11:1075,33,0	0/0:42,0:42:99:0,117,5768	0/0:22,0:22:66.21:0,66,3142	1/1:1,19:20:44.91:1438,45,0	1/1:2,15:17:33.11:1066,33,0	0/0:19,0:19:57.20:0,57,2771	0/0:31,0:31:90.31:0,90,4658	1/1:4,25:29:53.79:1730,54,0	1/1:2,18:20:27.09:807,27,0	0/0:12,0:12:36.12:0,36,1823	0/0:25,0:25:63.21:0,63,3130	0/0:24,0:24:72.25:0,72,3693	0/0:35,0:35:99:0,99,4749	1/1:7,18:25:42.14:1348,42,0	1/1:7,25:32:51.52:1625,52,0	1/1:5,15:20:27.09:879,27,0	1/1:4,22:26:42.14:1360,42,0	0/0:45,0:45:99:0,129,6155	0/0:29,0:28:84.26:0,84,4028	0/0:20,0:20:60.21:0,60,3094
chr10	78197411	.	T	TA	2811.52	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=3.753;DP=325;FS=7.634;HRun=8;HaplotypeScore=34.0983;InbreedingCoeff=0.8851;MQ=73.71;MQ0=0;MQRankSum=-1.020;QD=26.28;ReadPosRankSum=0.222;VQSLOD=3.6953;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:18:45.02:0,45,412	1/1:1,4:5:12.04:139,12,0	0/0:9,0:9:20.81:0,21,178	0/1:4,0:3:0:0,0,0	1/1:0,15:15:42.12:485,42,0	0/0:16,0:16:45.02:0,45,412	0/0:6,0:6:17.98:0,18,156	0/0:33,0:33:90.02:0,90,815	0/0:4,0:4:12.01:0,12,110	1/1:3,16:19:48.13:543,48,0	1/1:1,11:12:32.93:345,33,0	0/0:2,0:2:6:0,6,55	0/0:12,0:12:36.02:0,36,329	1/1:0,2:2:6.02:69,6,0	1/1:0,12:12:30.09:346,30,0	0/0:9,0:9:27:0,27,243	0/0:25,0:25:68.99:0,69,619	1/1:0,15:15:36.11:415,36,0	0/0:15,0:15:39.02:0,39,357	0/0:9,0:9:27.01:0,27,247	0/0:2,0:2:6:0,6,55	0/0:6,0:6:18.01:0,18,165	0/0:8,0:8:18:0,18,165	0/0:1,0:1:3:0,3,27	0/0:23,0:22:66.04:0,66,604	1/1:1,14:15:42.10:465,42,0	0/0:20,0:19:57.01:0,57,516	1/1:0,8:7:18.05:208,18,0
chr10	78200258	.	CATGTGTGTGTGTGTGT	C	4088.87	PASS	AB=0.932;AC=30;AF=0.536;AN=56;BaseQRankSum=-7.048;DP=550;FS=29.576;HRun=0;HaplotypeScore=241.2867;InbreedingCoeff=-0.2131;MQ=66.31;MQ0=17;MQRankSum=-1.393;QD=9.78;ReadPosRankSum=-4.971;VQSLOD=0.4479;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:69.50:0,69,2778	1/1:1,13:14:7.72:228,8,0	0/0:37,0:24:48.53:0,49,741	0/0:33,0:19:46.78:0,47,817	1/1:12,0:12:23.58:187,24,0	0/1:12,0:14:87.33:87,0,289	1/1:4,0:19:2.90:16,3,0	0/1:24,0:24:99:335,0,365	0/1:11,0:15:81.42:125,0,81	1/1:13,1:13:35.84:428,36,0	1/1:0,15:16:2.69:11,3,0	0/1:16,0:18:68.04:68,0,710	0/1:13,0:14:20.60:21,0,870	1/1:0,19:22:6.02:224,6,0	1/1:13,5:26:53.86:1134,54,0	0/1:20,0:25:99:261,0,194	0/1:19,0:21:99:141,0,262	0/1:16,0:13:99:121,0,440	0/1:15,0:14:99:206,0,107	0/1:12,0:12:33.87:34,0,1040	0/1:31,0:29:96.12:96,0,804	0/1:18,0:18:90.42:90,0,534	0/1:7,0:7:38.91:39,0,393	0/1:21,0:21:12.92:13,0,636	0/1:13,0:21:79.72:149,0,80	0/0:25,0:24:26.11:0,26,1038	0/1:16,0:16:76.85:77,0,1097	0/0:7,0:7:20.73:0,21,371
chr10	78200288	.	TGTGTGTGTGTGTGTGAGAGA	T	3071.15	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=3.482;DP=603;FS=31.508;HRun=0;HaplotypeScore=280.4482;InbreedingCoeff=0.0956;MQ=44.11;MQ0=27;MQRankSum=-1.217;QD=8.58;ReadPosRankSum=-3.764;VQSLOD=0.9570;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:38:72.38:0,72,3332	1/1:13,1:13:11.22:271,11,0	0/0:6,0:2:3.01:0,3,132	0/0:13,0:6:14.98:0,15,266	1/1:9,0:8:2.79:61,3,0	0/0:17,0:17:13.52:0,14,459	0/1:40,0:37:51.39:51,0,318	0/1:19,0:18:4.82:5,0,1133	0/1:26,0:26:99:372,0,362	1/1:16,0:14:17.36:326,17,0	0/0:12,0:12:0:0,0,0	0/1:30,0:30:99:144,0,1053	0/1:23,0:23:92.33:92,0,1033	1/1:31,1:31:17.77:505,18,0	1/1:22,6:28:22.43:956,22,0	0/1:22,0:22:99:107,0,531	0/1:24,0:24:99:183,0,637	0/0:15,0:11:26.96:0,27,969	0/1:15,0:13:42.82:43,0,461	0/0:17,0:17:21.77:0,22,1086	0/0:32,0:29:22.92:0,23,927	0/0:25,0:24:18.71:0,19,715	0/0:18,0:18:29.62:0,30,623	0/0:34,0:32:37.48:0,37,934	0/1:21,0:20:29.52:30,0,372	0/1:21,0:19:38.89:39,0,883	0/1:18,0:18:61.83:62,0,1434	0/0:13,0:11:13.13:0,13,459
chr10	78200302	.	TGAGAGAGA	T	4658.22	PASS	AB=0.955;AC=40;AF=0.714;AN=56;BaseQRankSum=-0.650;DP=532;FS=14.287;HRun=0;HaplotypeScore=178.6841;InbreedingCoeff=0.2910;MQ=45.65;MQ0=22;MQRankSum=-1.227;QD=10.68;ReadPosRankSum=2.318;VQSLOD=3.2303;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:30:54.10:0,54,1377	1/1:12,0:13:5.17:74,5,0	0/0:4,0:1:2.80:0,3,13	0/0:11,0:4:3.95:0,4,82	1/1:4,0:9:2.03:36,2,0	0/1:12,0:12:4:32,0,4	0/0:34,0:32:18:0,18,48	1/1:11,0:14:7.26:95,7,0	1/1:22,0:23:11.09:327,11,0	1/1:10,6:15:17.97:273,18,0	1/1:9,0:11:9.03:118,9,0	1/1:18,5:27:22.36:637,22,0	1/1:10,3:17:20.18:499,20,0	1/1:24,0:25:27.09:401,27,0	1/1:15,2:30:18.53:331,19,0	0/1:23,0:26:43.15:43,0,70	0/1:18,0:19:32.44:72,0,32	0/0:13,0:10:12.04:0,12,336	1/1:10,1:11:15.05:337,15,0	1/1:8,1:17:0.61:20,1,0	1/1:20,0:22:2.50:76,2,0	1/1:13,4:20:10.70:191,11,0	1/1:11,1:15:18.06:421,18,0	1/1:30,4:33:8.73:220,9,0	0/1:20,0:19:12.23:12,0,20	0/1:17,0:16:91.58:92,0,92	1/1:11,2:15:11.39:284,11,0	0/1:13,0:11:11.70:68,0,12
chr10	78200348	.	GGTGTGTGTGT	G	667.17	PASS	AB=0.750;AC=11;AF=0.196;AN=56;BaseQRankSum=2.123;DP=572;FS=0.951;HRun=0;HaplotypeScore=216.5388;InbreedingCoeff=0.6040;MQ=57.24;MQ0=14;MQRankSum=-3.016;QD=6.48;ReadPosRankSum=0.270;VQSLOD=2.7048;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:57.17:0,57,2031	0/0:9,0:9:18.03:0,18,541	0/0:35,0:15:6.02:0,6,150	0/0:45,0:21:2.67:0,3,213	0/0:18,0:21:26.93:0,27,997	0/0:9,0:10:6.02:0,6,255	0/0:18,0:19:10.57:0,11,286	1/1:17,0:23:6.78:43,7,0	0/0:25,0:27:40.82:0,41,1048	0/0:16,0:16:27.09:0,27,1009	0/0:7,0:7:18.06:0,18,657	0/0:26,0:26:2.55:0,3,54	0/0:19,0:19:21.07:0,21,681	0/0:19,0:20:33.12:0,33,1348	0/0:26,0:27:17.12:0,17,839	0/0:27,0:30:36.27:0,36,1170	0/0:20,0:20:15.02:0,15,267	0/1:6,0:9:28.77:29,0,76	1/1:13,3:18:15.52:410,16,0	1/1:9,4:12:2.99:24,3,0	1/1:26,2:26:4.88:43,5,0	0/0:18,0:18:14.57:0,15,470	0/0:14,0:15:5.75:0,6,136	0/0:21,0:23:8.59:0,9,276	0/0:14,0:15:12.02:0,12,284	0/0:19,0:26:51.17:0,51,1043	1/1:4,6:11:8.97:270,9,0	0/0:5,0:8:8.62:0,9,112
chr10	78200381	.	G	GTGTGTA	1874.72	PASS	AB=0.596;AC=16;AF=0.286;AN=56;BaseQRankSum=2.276;DP=716;FS=0.000;HRun=0;HaplotypeScore=179.7351;InbreedingCoeff=0.3784;MQ=52.83;MQ0=12;MQRankSum=-4.093;QD=6.19;ReadPosRankSum=3.310;VQSLOD=2.0292;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:57.34:0,57,809	0/0:14,0:14:29.99:0,30,374	0/0:36,0:12:29.99:0,30,282	0/0:45,0:26:56.16:0,56,595	0/0:27,0:26:45.02:0,45,612	1/1:4,7:16:6.02:130,6,0	0/1:8,1:31:18.63:103,0,19	0/0:26,0:26:56.75:0,57,454	0/1:13,11:28:19.41:212,0,19	0/0:27,0:26:68.99:0,69,814	0/0:15,0:15:24.75:0,25,276	0/1:11,15:29:0:0,0,0	1/1:7,17:27:6.08:438,6,0	0/0:25,0:25:36.04:0,36,540	0/0:31,0:31:50.69:0,51,646	0/1:13,16:34:62.91:746,0,63	1/1:6,17:26:2.72:106,3,0	0/0:12,0:12:26.68:0,27,237	0/0:11,0:11:30.03:0,30,362	0/0:10,0:9:5.98:0,6,50	0/0:32,0:28:20.39:0,20,151	0/1:6,20:30:25.02:140,0,25	1/1:6,13:23:2.37:10,2,0	0/1:9,24:39:6.42:42,0,6	1/1:6,13:19:2.68:104,3,0	0/0:35,0:35:29.22:0,29,636	0/0:14,0:14:26.92:0,27,281	0/0:9,0:9:21.01:0,21,242
chr10	78201966	.	GC	G	2465.21	PASS	AB=0.843;AC=40;AF=0.741;AN=54;BaseQRankSum=-0.271;DP=353;FS=31.666;HRun=12;HaplotypeScore=60.1182;InbreedingCoeff=0.3617;MQ=72.94;MQ0=2;MQRankSum=0.474;QD=7.49;ReadPosRankSum=3.078;VQSLOD=0.2084;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:3.46:0,3,24	1/1:2,4:6:5.97:47,6,0	0/1:16,0:12:28.32:28,0,40	0/0:7,0:6:11.95:0,12,98	1/1:6,15:22:43.85:330,44,0	1/1:8,0:11:4.22:12,4,0	1/1:7,0:18:12.39:37,12,0	1/1:6,2:8:5.97:46,6,0	1/1:3,0:16:16.17:47,16,0	1/1:13,12:24:43.83:327,44,0	1/1:1,4:6:10.99:75,11,0	0/1:17,0:22:10.83:16,0,11	1/1:6,0:12:19.47:55,19,0	1/1:4,20:25:49.84:377,50,0	1/1:5,21:26:56.76:441,57,0	1/1:7,0:12:8.10:23,8,0	1/1:11,0:22:26.17:76,26,0	1/1:2,19:22:58.81:446,59,0	1/1:4,0:4:5.95:43,6,0	0/0:4,0:4:0:0,0,0	0/0:3,0:3:0:0,0,0	1/1:9,0:13:14.04:39,14,0	0/1:7,0:8:4.22:4,0,13	1/1:8,0:18:22.48:63,22,0	0/1:6,0:12:0.59:15,0,1	0/0:3,0:3:0:0,0,0	1/1:1,2:3:5.98:46,6,0	./.
chr10	78201977	.	CCG	C	518.57	PASS	AB=0.959;AC=16;AF=0.296;AN=54;BaseQRankSum=-4.058;DP=351;FS=31.955;HRun=0;HaplotypeScore=78.5475;InbreedingCoeff=0.0206;MQ=73.97;MQ0=2;MQRankSum=-0.603;QD=3.22;ReadPosRankSum=2.769;VQSLOD=0.4140;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:8.57:0,9,52	0/0:4,0:4:5.01:0,5,22	0/0:15,0:10:10.42:0,10,143	0/0:11,0:10:23.37:0,23,183	0/0:21,0:21:43.44:0,43,244	1/1:6,1:7:10.08:73,10,0	0/1:19,3:22:52.01:52,0,84	0/0:6,0:6:14.35:0,14,98	0/1:18,0:18:14.22:30,0,14	0/0:25,0:25:55.99:0,56,338	0/0:11,0:11:19.68:0,20,142	1/1:11,0:11:23.40:135,23,0	0/1:17,0:17:52.17:52,0,78	0/0:28,0:28:52.47:0,52,298	0/0:25,0:25:60.97:0,61,286	0/1:8,1:9:8.02:8,0,35	0/1:19,1:19:37.24:117,0,37	0/0:24,0:24:38.25:0,38,245	0/0:4,0:4:9.49:0,9,44	0/0:6,0:6:11.83:0,12,79	0/0:3,0:3:5.92:0,6,41	0/1:16,0:16:54.25:64,0,54	0/1:5,1:6:24.53:25,0,56	0/1:19,0:19:65.88:66,0,88	0/1:11,0:11:20.83:48,0,21	1/1:1,0:1:0.47:1,0,0	0/1:4,0:4:3.82:4,0,30	./.
chr10	78203340	.	TG	T	7267.70	PASS	AB=0.883;AC=37;AF=0.661;AN=56;BaseQRankSum=-0.995;DP=555;FS=0.477;HRun=10;HaplotypeScore=90.1024;InbreedingCoeff=0.6474;MQ=69.39;MQ0=0;MQRankSum=-1.937;QD=15.97;ReadPosRankSum=5.967;VQSLOD=5.1038;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,1:36:37.09:0,37,624	0/0:1,0:3:2.88:0,3,15	0/0:12,1:12:17.70:0,18,150	0/1:16,0:16:3.72:4,0,169	0/0:6,0:13:14.61:0,15,101	1/1:7,11:17:32.92:278,33,0	1/1:7,27:34:74.96:651,75,0	1/1:7,10:17:26.98:234,27,0	1/1:4,26:31:77.01:657,77,0	0/0:10,0:16:20.26:0,20,120	0/0:6,0:6:5.93:0,6,40	1/1:7,17:24:53.99:468,54,0	1/1:8,21:29:74.98:651,75,0	0/0:7,0:13:5.87:0,6,41	0/1:10,1:28:0.25:0,0,88	1/1:2,16:18:50.98:442,51,0	1/1:5,28:34:86.01:735,86,0	1/1:3,13:18:40.06:324,40,0	0/1:9,13:22:17.47:228,0,17	1/1:4,13:17:29.15:259,29,0	1/1:9,21:30:59.96:521,60,0	1/1:7,9:16:32.97:286,33,0	1/1:3,10:13:32.99:286,33,0	1/1:4,24:28:62.94:546,63,0	1/1:5,13:18:32.87:277,33,0	0/1:15,1:16:1.91:2,0,208	1/1:5,13:17:47.94:409,48,0	0/1:7,1:8:8:8,0,148
chr10	78204157	.	A	AAATG	3786.77	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.652;DP=609;FS=0.476;HRun=0;HaplotypeScore=118.1858;InbreedingCoeff=0.9467;MQ=60.45;MQ0=5;MQRankSum=4.936;QD=36.06;ReadPosRankSum=-1.266;VQSLOD=3.5493;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.15:0,87,1290	0/0:12,0:12:30.10:0,30,420	0/0:20,0:14:24.90:0,25,340	0/0:15,0:11:1.34:0,1,102	0/0:35,0:35:76.47:0,76,907	0/0:15,0:15:36.12:0,36,583	0/0:10,0:10:27.08:0,27,417	1/1:25,0:22:45.08:659,45,0	0/0:19,0:19:45.12:0,45,675	0/0:25,0:25:66.05:0,66,859	0/0:30,0:30:58.35:0,58,653	0/0:23,0:23:54.18:0,54,861	0/0:22,0:22:54.17:0,54,859	0/0:23,0:23:39.10:0,39,498	0/0:24,0:24:49.83:0,50,622	0/0:13,0:13:30.09:0,30,471	0/0:24,0:24:60.15:0,60,911	0/0:21,0:20:45.12:0,45,608	1/1:3,14:16:42.13:808,42,0	1/1:4,22:27:66.08:1132,66,0	1/1:1,12:13:18.06:449,18,0	0/0:32,0:32:90.26:0,90,1361	0/0:20,0:20:57.19:0,57,928	0/0:9,0:9:24.07:0,24,378	0/0:32,0:32:78.26:0,78,1277	0/0:30,0:30:75.25:0,75,1222	1/1:3,19:22:30.10:737,30,0	0/0:17,0:17:39.11:0,39,597
chr10	78204172	.	TAAACAAAC	T	6556.20	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.026;DP=630;FS=7.073;HRun=0;HaplotypeScore=162.6420;InbreedingCoeff=0.9796;MQ=58.36;MQ0=6;MQRankSum=-10.786;QD=44.91;ReadPosRankSum=1.165;VQSLOD=4.0719;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:75.23:0,75,2890	1/1:5,11:16:27.09:659,27,0	0/0:22,0:15:10.46:0,10,787	0/0:14,0:10:11.32:0,11,348	1/1:9,26:35:60.14:1461,60,0	0/0:16,0:15:30.10:0,30,1022	0/0:10,0:10:15.03:0,15,484	0/0:31,0:28:46.59:0,47,1358	0/0:19,0:19:39.13:0,39,1579	1/1:5,22:27:60.17:1354,60,0	1/1:7,18:25:54.10:1258,54,0	0/0:23,0:23:45.15:0,45,1690	0/0:19,0:19:39.09:0,39,1358	1/1:4,14:18:30.10:747,30,0	1/1:3,22:25:42.14:1077,42,0	0/0:17,0:17:39.13:0,39,1563	0/0:27,0:27:63.22:0,63,2518	0/0:9,0:23:38.90:0,39,382	0/0:19,0:19:33.11:0,33,1220	0/0:23,0:23:48.16:0,48,1635	0/0:15,0:15:27.09:0,27,1010	0/0:33,0:33:78.24:0,78,2781	0/0:25,0:25:66.19:0,66,2496	0/0:9,0:9:24.07:0,24,872	0/0:34,0:34:75.26:0,75,2985	0/0:32,0:32:78.26:0,78,3022	0/0:28,0:27:54.19:0,54,2075	0/0:13,0:13:27.09:0,27,976
chr10	78206167	.	CTT	C	3871.90	PASS	AB=0.583;AC=24;AF=0.429;AN=56;BaseQRankSum=-5.961;DP=550;FS=4.175;HRun=13;HaplotypeScore=79.9832;InbreedingCoeff=0.8223;MQ=76.13;MQ0=2;MQRankSum=-1.722;QD=16.13;ReadPosRankSum=3.701;VQSLOD=3.0552;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:68.83:0,69,890	0/0:4,0:10:17.94:0,18,172	0/0:25,0:15:19.06:0,19,167	0/0:22,0:16:19.52:0,20,168	0/0:13,0:24:48.63:0,49,472	0/0:4,1:20:6.86:0,7,107	0/1:3,1:14:8.63:9,0,40	0/0:12,1:34:20.15:0,20,214	0/0:1,0:18:22.76:0,23,95	0/0:7,0:22:52.43:0,52,431	0/0:6,0:20:27.87:0,28,437	1/1:3,17:21:46.50:458,47,0	1/1:4,12:17:26.70:292,27,0	0/0:8,0:23:29.90:0,30,273	0/0:6,0:20:30.02:0,30,300	0/0:2,0:13:24.95:0,25,86	0/0:6,0:23:15.40:0,15,125	0/0:2,0:6:12.48:0,12,43	1/1:5,12:17:35.97:335,36,0	1/1:5,22:27:56.93:539,57,0	1/1:2,10:12:21.02:204,21,0	1/1:2,5:8:5.91:107,6,0	1/1:2,12:17:26.45:277,26,0	1/1:4,21:25:39.04:378,39,0	0/1:7,2:20:23.72:24,0,111	1/1:6,19:26:50.90:517,51,0	1/1:5,22:29:57.68:587,58,0	1/1:0,6:6:15.02:145,15,0
chr10	78206345	.	TA	T	9492.16	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=5.286;DP=599;FS=6.358;HRun=9;HaplotypeScore=85.5968;InbreedingCoeff=0.8352;MQ=72.53;MQ0=0;MQRankSum=-3.574;QD=17.45;ReadPosRankSum=4.424;VQSLOD=4.9190;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.18:0,93,1024	1/1:1,0:7:12.22:36,12,0	0/0:10,0:10:24.06:0,24,266	0/0:11,0:11:26.73:0,27,268	1/1:3,0:40:74.20:226,74,0	1/1:3,24:27:66.03:604,66,0	1/1:4,19:23:54.03:494,54,0	1/1:6,33:39:99:899,99,0	1/1:2,18:20:48.02:439,48,0	1/1:2,0:32:55.08:165,55,0	1/1:2,0:21:38.70:114,39,0	1/1:1,23:24:60.03:549,60,0	1/1:1,15:16:45.02:412,45,0	1/1:5,1:24:33.55:117,34,0	1/1:1,0:24:44.81:132,45,0	1/1:2,14:16:33.02:302,33,0	1/1:5,15:20:47.82:425,48,0	1/1:3,0:14:5.36:45,5,0	1/1:5,14:19:42.02:384,42,0	1/1:5,21:26:59.99:542,60,0	1/1:2,16:18:42.02:384,42,0	1/1:2,20:22:57.02:522,57,0	1/1:0,24:24:72.04:659,72,0	1/1:1,9:10:4.18:172,4,0	1/1:3,20:23:63.02:572,63,0	1/1:1,22:23:66.02:598,66,0	1/1:4,23:27:66.03:604,66,0	1/1:1,4:5:0.99:96,1,0
chr10	78207086	.	A	AATCT	39882.94	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-10.493;DP=754;FS=1.923;HRun=0;HaplotypeScore=112.7539;InbreedingCoeff=0.9991;MQ=72.70;MQ0=0;MQRankSum=-9.729;QD=60.61;ReadPosRankSum=3.364;VQSLOD=6.3568;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,108,1993	1/1:0,9:10:24.08:640,24,0	0/0:21,0:21:54.86:0,55,961	0/0:35,0:35:96.33:0,96,1662	1/1:5,22:30:60.21:1497,60,0	1/1:2,23:27:68.82:1720,69,0	1/1:1,15:17:39.13:1025,39,0	1/1:12,23:39:99:2327,102,0	1/1:3,14:17:36.12:938,36,0	1/1:2,23:26:75.26:1855,75,0	1/1:5,22:28:69.24:1751,69,0	1/1:3,19:25:57.20:1474,57,0	1/1:8,24:32:72.25:1808,72,0	1/1:3,27:30:84.29:2172,84,0	1/1:5,46:51:99:3207,123,0	1/1:2,28:32:60.21:1569,60,0	1/1:3,21:24:54.19:1440,54,0	1/1:2,21:23:64.10:1681,64,0	1/1:5,8:15:42.14:964,42,0	1/1:4,25:30:78.27:1942,78,0	1/1:5,29:35:81.27:2115,81,0	1/1:2,19:21:45.15:1139,45,0	1/1:2,16:18:39.13:974,39,0	1/1:2,28:32:60.21:1599,60,0	1/1:0,25:26:66.23:1749,66,0	1/1:8,26:34:87.18:1965,87,0	1/1:2,21:24:60.21:1548,60,0	1/1:4,8:12:33.11:783,33,0
chr10	78207221	.	ATG	A	9621.02	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-8.270;DP=838;FS=1.378;HRun=0;HaplotypeScore=154.5756;InbreedingCoeff=0.9642;MQ=64.53;MQ0=10;MQRankSum=-1.393;QD=21.29;ReadPosRankSum=1.529;VQSLOD=5.0111;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:87.19:0,87,1279	1/1:4,9:13:18.06:216,18,0	0/0:34,0:25:27.09:0,27,412	0/0:24,0:17:10.18:0,10,290	1/1:6,33:38:87.27:1043,87,0	1/1:9,33:43:90.28:1079,90,0	1/1:11,13:24:30.09:360,30,0	0/0:11,0:32:71.89:0,72,700	1/1:7,18:25:42.13:504,42,0	1/1:7,28:35:78.21:921,78,0	1/1:6,29:33:75.16:881,75,0	0/0:7,1:22:11.78:0,12,399	0/0:9,0:28:50.98:0,51,464	1/1:7,16:22:3.18:527,3,0	1/1:7,30:37:75.23:899,75,0	1/1:6,23:30:60.01:697,60,0	1/1:8,25:33:60.18:719,60,0	1/1:12,15:27:22.24:448,22,0	0/0:12,0:23:35.97:0,36,310	0/0:10,0:30:50.98:0,51,446	0/0:14,0:32:71.97:0,72,655	0/0:2,1:37:47.77:0,48,662	0/0:5,0:21:38.98:0,39,342	0/0:7,0:21:35.98:0,36,313	1/1:3,21:25:54:625,54,0	1/1:7,0:42:92.46:451,92,0	0/0:11,0:37:77.98:0,78,705	1/1:1,0:21:51.13:251,51,0
chr10	78207425	.	AAC	A	5518.61	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.427;DP=681;FS=11.378;HRun=0;HaplotypeScore=85.0127;InbreedingCoeff=0.9999;MQ=90.70;MQ0=1;MQRankSum=-2.395;QD=38.86;ReadPosRankSum=3.640;VQSLOD=6.3128;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.26:0,75,1384	0/0:12,0:12:33.11:0,33,618	0/0:27,0:27:75.26:0,75,1363	0/0:31,0:31:84.26:0,84,1461	0/0:22,0:22:54.19:0,54,1006	1/1:1,30:31:93.31:1370,93,0	1/1:0,16:16:42.14:619,42,0	0/0:38,0:38:99:0,105,1945	1/1:2,24:25:60.16:859,60,0	0/0:21,0:21:63.21:0,63,1153	0/0:24,0:24:66.23:0,66,1216	0/0:25,0:25:75.26:0,75,1405	0/0:28,0:28:81.28:0,81,1484	0/0:19,0:19:57.20:0,57,1067	0/0:28,0:28:84.27:0,84,1536	1/1:1,22:23:57.19:840,57,0	1/1:0,26:26:72.20:1036,72,0	0/0:16,0:16:45.15:0,45,837	0/0:21,0:21:60.16:0,60,1055	0/0:29,0:29:84.29:0,84,1564	0/0:30,0:30:84.29:0,84,1567	0/0:24,0:24:66.23:0,66,1216	0/0:19,0:19:54.19:0,54,1010	0/0:29,0:29:84.29:0,84,1562	1/1:1,19:20:54.18:795,54,0	0/0:27,0:27:81.28:0,81,1518	0/0:28,0:28:81.28:0,81,1449	0/0:14,0:14:42.14:0,42,787
chr10	78211804	.	T	TTATATAAAC	12095.44	PASS	AB=0.857;AC=23;AF=0.426;AN=54;BaseQRankSum=6.589;DP=396;FS=3.398;HRun=0;HaplotypeScore=150.9565;InbreedingCoeff=0.8853;MQ=68.96;MQ0=8;MQRankSum=-11.798;QD=100.80;ReadPosRankSum=0.401;VQSLOD=5.0714;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.21:0,69,1923	0/0:10,0:10:30.09:0,30,840	0/0:24,0:11:12.06:0,12,694	0/0:35,0:25:54.68:0,55,1309	0/0:17,0:17:51.15:0,51,1393	0/0:25,0:25:56.71:0,57,1296	0/0:17,0:17:36.09:0,36,1040	1/1:15,0:15:36.12:1689,36,0	0/0:12,0:12:30.10:0,30,847	0/0:12,0:12:36.12:0,36,1094	0/0:8,0:8:24.04:0,24,676	1/1:6,4:10:27.09:1207,27,0	1/1:6,2:8:21.07:871,21,0	0/0:12,0:12:24.08:0,24,750	0/0:19,0:19:48.13:0,48,1254	0/0:16,0:15:42.12:0,42,1131	0/0:30,0:28:69.09:0,69,1737	1/1:4,4:8:24.07:948,24,0	1/1:6,4:12:19.77:1054,20,0	1/1:3,1:4:12.04:556,12,0	./.	1/1:2,3:6:7.84:335,8,0	1/1:6,1:8:21.07:881,21,0	1/1:8,2:10:6.02:261,6,0	0/0:11,0:11:30.10:0,30,931	0/1:15,3:17:41.85:2102,0,42	1/1:6,3:11:24.95:1194,25,0	1/1:8,2:10:26.32:997,26,0
chr10	78211806	.	TTG	T	2142.16	PASS	AB=0.897;AC=28;AF=0.500;AN=56;BaseQRankSum=1.766;DP=433;FS=3.644;HRun=0;HaplotypeScore=107.4454;InbreedingCoeff=0.6501;MQ=66.13;MQ0=9;MQRankSum=6.916;QD=8.60;ReadPosRankSum=4.285;VQSLOD=3.4320;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:29.37:0,29,742	0/1:3,0:10:7.78:75,0,8	0/0:24,0:10:3.01:0,3,42	0/1:34,0:24:12.51:13,0,199	1/1:7,1:18:19.52:127,20,0	1/1:7,18:25:33.09:379,33,0	1/1:2,15:17:30.09:345,30,0	0/0:17,0:12:31.38:0,31,249	1/1:6,6:12:12.03:138,12,0	1/1:5,0:12:19.89:98,20,0	1/1:4,0:8:8.52:42,9,0	0/0:12,0:12:2.92:0,3,17	0/0:12,0:12:3.11:0,3,9	1/1:5,0:12:8.52:42,9,0	1/1:4,0:18:34.09:168,34,0	1/1:6,11:16:24.07:276,24,0	1/1:14,17:29:9.58:353,10,0	0/0:9,0:8:10.12:0,10,57	0/0:16,0:16:30.77:0,31,198	0/1:8,0:8:0:0,0,0	1/1:6,0:6:0.47:1,0,0	0/0:15,0:15:5.99:0,6,50	0/0:8,0:8:2.99:0,3,24	0/1:10,0:10:0:0,0,0	1/1:2,9:11:24.07:276,24,0	0/0:15,0:15:21.47:0,21,197	0/0:18,0:18:25.04:0,25,161	0/0:10,0:10:12.71:0,13,83
chr10	78211809	.	T	TAAGATATG	7213.65	PASS	AB=0.873;AC=19;AF=0.339;AN=56;BaseQRankSum=11.881;DP=435;FS=24.777;HRun=0;HaplotypeScore=201.8452;InbreedingCoeff=0.2681;MQ=60.73;MQ0=9;MQRankSum=-11.334;QD=37.38;ReadPosRankSum=2.071;VQSLOD=2.6282;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.23:0,75,2026	0/0:10,0:10:30.06:0,30,585	0/1:22,0:8:9.95:10,0,573	0/0:29,0:19:36.93:0,37,1185	0/0:17,0:17:45.14:0,45,1059	0/0:25,0:25:47.88:0,48,1002	0/0:19,0:19:36.11:0,36,772	0/1:25,0:20:99:637,0,296	0/0:10,0:10:24.08:0,24,624	0/0:12,0:12:36.12:0,36,838	0/0:8,0:8:21.07:0,21,536	1/1:9,3:12:15.05:479,15,0	1/1:10,1:11:27.09:1084,27,0	0/0:12,0:12:24.08:0,24,602	0/0:16,0:17:41.17:0,41,857	0/0:14,0:13:33.11:0,33,796	0/0:31,0:29:60.17:0,60,1382	0/1:5,3:7:28.61:565,0,29	0/1:11,3:15:99:773,0,116	0/1:9,1:10:7.47:207,0,7	1/1:6,1:7:5.44:143,5,0	0/1:11,2:14:60.33:74,0,60	1/1:9,1:10:14.62:369,15,0	1/1:10,0:10:11.82:195,12,0	0/0:12,0:12:29.81:0,30,705	0/1:19,2:20:99:1117,0,210	0/1:15,2:18:99:905,0,123	0/1:8,2:10:74.38:656,0,74
chr10	78211812	.	G	GA	158.53	PASS	AB=0.977;AC=12;AF=0.214;AN=56;BaseQRankSum=7.718;DP=454;FS=2.914;HRun=0;HaplotypeScore=111.4807;InbreedingCoeff=0.1202;MQ=59.39;MQ0=9;MQRankSum=-5.421;QD=1.24;ReadPosRankSum=-3.369;VQSLOD=1.4732;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.20:0,72,984	0/0:10,0:10:25.90:0,26,173	0/0:22,0:8:15.19:0,15,237	0/0:27,0:18:44.04:0,44,579	0/0:18,0:18:33.69:0,34,346	0/0:24,0:24:44.21:0,44,350	0/0:21,0:21:41.28:0,41,323	0/0:26,0:21:57.06:0,57,690	0/0:11,0:11:26.75:0,27,272	0/0:12,0:12:34.92:0,35,289	0/0:9,0:9:23.56:0,24,232	1/1:13,1:14:11.40:87,11,0	0/1:12,1:13:14.77:15,0,57	0/0:12,0:12:20.56:0,21,208	0/0:19,0:19:39.97:0,40,251	0/0:16,0:15:32.43:0,32,258	0/0:30,0:28:62.24:0,62,571	0/1:7,1:7:58.96:59,0,71	0/1:15,0:15:22.76:23,0,382	0/1:13,0:13:0.27:0,0,67	0/0:7,0:7:0.89:0,1,2	0/1:15,0:15:11.78:12,0,55	0/1:9,0:9:29.32:31,0,29	1/1:8,2:10:2.70:13,3,0	0/0:14,0:14:29.11:0,29,216	0/0:20,1:20:14.03:0,14,570	0/1:19,0:19:32.54:33,0,280	0/1:12,0:12:32.69:33,0,202
chr10	78212472	.	AC	A	1232.39	PASS	AB=0.518;AC=3;AF=0.054;AN=56;BaseQRankSum=6.831;DP=711;FS=0.000;HRun=1;HaplotypeScore=76.7807;InbreedingCoeff=0.6975;MQ=82.10;MQ0=0;MQRankSum=-1.896;QD=34.23;ReadPosRankSum=-0.032;VQSLOD=3.3764;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,2224	0/0:10,0:10:30.10:0,30,470	0/0:25,0:25:72.24:0,72,1117	0/0:27,0:26:32.43:0,32,883	0/0:19,0:19:57.19:0,57,906	0/0:26,0:26:78.25:0,78,1220	0/0:33,0:33:99:0,99,1583	0/0:40,0:40:99:0,120,1848	0/0:22,0:22:63.21:0,63,1007	0/0:25,0:25:75.25:0,75,1180	0/0:20,0:20:60.20:0,60,944	0/0:22,0:22:66.22:0,66,1035	0/0:34,0:34:99:0,99,1559	0/0:22,0:22:63.21:0,63,1000	0/0:42,0:42:99:0,126,1986	0/0:25,0:25:75.26:0,75,1189	0/0:21,0:21:57.19:0,57,911	0/0:21,0:21:60.20:0,60,936	0/0:20,0:20:60.20:0,60,948	0/0:17,0:17:48.16:0,48,767	0/0:38,0:38:99:0,114,1811	0/0:20,0:20:57.18:0,57,865	0/0:15,0:15:45.15:0,45,719	0/0:34,0:34:99:0,102,1600	0/0:27,0:27:78.27:0,78,1247	0/1:2,27:29:8.66:1043,0,9	0/0:23,0:23:69.18:0,69,1041	1/1:0,7:7:21.07:294,21,0
chr10	78212799	.	AT	A	2025.09	PASS	AB=0.528;AC=3;AF=0.054;AN=56;BaseQRankSum=7.782;DP=665;FS=8.868;HRun=2;HaplotypeScore=83.7813;InbreedingCoeff=0.6492;MQ=77.67;MQ0=0;MQRankSum=1.149;QD=32.14;ReadPosRankSum=0.913;VQSLOD=3.0278;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1519	0/0:9,0:9:27.09:0,27,405	0/0:16,0:16:48.15:0,48,699	0/0:16,0:16:48.07:0,48,659	0/0:29,0:29:87.27:0,87,1264	0/0:25,0:25:72.23:0,72,1059	0/0:27,0:27:78.26:0,78,1168	0/0:47,0:47:99:0,138,2016	0/0:17,0:17:51.10:0,51,713	0/0:22,0:22:66.22:0,66,970	0/0:29,0:29:87.28:0,87,1271	0/0:17,0:17:51.13:0,51,738	0/0:20,0:20:57.19:0,57,852	0/0:18,0:18:54.10:0,54,758	0/0:33,0:33:99:0,99,1383	0/0:18,0:18:54.05:0,54,733	0/0:20,0:20:57.19:0,57,854	0/0:11,0:11:30.08:0,30,427	0/0:22,0:22:66.21:0,66,968	0/0:24,0:24:69.23:0,69,1034	0/0:32,0:32:87.20:0,87,1257	0/0:19,0:19:57.18:0,57,834	0/0:21,0:21:60.20:0,60,898	0/0:19,0:19:57.14:0,57,809	0/0:25,0:25:72.24:0,72,1079	0/1:4,34:38:23.42:1197,0,23	0/0:31,0:31:93.26:0,93,1331	1/1:0,25:25:72.23:934,72,0
chr10	78212919	.	CG	C	9224.81	PASS	AB=0.951;AC=52;AF=0.929;AN=56;BaseQRankSum=3.664;DP=585;FS=7.608;HRun=1;HaplotypeScore=181.5779;InbreedingCoeff=-0.0916;MQ=72.49;MQ0=0;MQRankSum=-7.549;QD=15.77;ReadPosRankSum=8.681;VQSLOD=4.3656;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:42.04:192,0,42	1/1:7,0:7:20.41:132,20,0	0/1:20,1:21:91.60:92,0,281	0/1:12,2:14:91.92:92,0,103	1/1:31,0:31:80.08:582,80,0	1/1:27,0:27:79.30:542,79,0	1/1:22,0:22:40.59:376,41,0	0/1:35,1:36:7.15:405,0,7	1/1:19,0:19:29.12:323,29,0	1/1:28,0:28:62.47:499,62,0	1/1:33,0:33:38.89:538,39,0	1/1:17,0:17:2.56:244,3,0	1/1:23,0:23:64.31:438,64,0	1/1:16,0:16:46.99:338,47,0	1/1:17,0:17:25.27:299,25,0	1/1:24,0:24:70.46:465,70,0	1/1:19,0:19:36.45:313,36,0	1/1:7,0:7:14.81:101,15,0	1/1:22,0:22:37.09:315,37,0	1/1:20,0:20:13.33:320,13,0	1/1:16,0:16:19.02:127,19,0	1/1:18,0:18:25.17:279,25,0	1/1:14,0:14:35.56:246,36,0	1/1:19,0:19:23.33:216,23,0	1/1:24,0:24:67.44:457,67,0	1/1:25,0:25:1.94:387,2,0	1/1:38,0:38:73.48:724,73,0	1/1:9,0:9:26.64:181,27,0
chr10	78213638	.	G	GTAGA	7738.39	PASS	AB=0.564;AC=25;AF=0.446;AN=56;BaseQRankSum=5.126;DP=761;FS=1.159;HRun=0;HaplotypeScore=224.6249;InbreedingCoeff=0.9093;MQ=65.14;MQ0=1;MQRankSum=-5.669;QD=22.05;ReadPosRankSum=-2.214;VQSLOD=4.3758;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:59.69:0,60,1264	0/0:10,0:10:24:0,24,283	0/0:44,0:37:41.31:0,41,760	0/0:34,0:28:25.68:0,26,355	0/0:17,0:17:37.94:0,38,487	0/0:22,0:22:45.15:0,45,748	0/0:18,0:18:36.04:0,36,466	1/1:13,16:31:60.03:945,60,0	0/0:19,0:19:48.08:0,48,739	0/0:40,0:40:77.09:0,77,1123	0/0:32,0:32:58.91:0,59,754	1/1:15,0:18:10.15:101,10,0	1/1:32,0:38:55.58:455,56,0	0/0:23,0:23:42.13:0,42,649	0/0:32,0:32:72.63:0,73,1036	0/0:27,0:27:60.17:0,60,937	0/0:22,0:22:38.78:0,39,685	1/1:8,1:9:18.06:322,18,0	1/1:9,16:25:60.15:1109,60,0	0/1:10,33:44:14.34:622,0,14	1/1:23,4:27:27.09:554,27,0	1/1:27,0:31:26.68:235,27,0	1/1:32,0:34:14.67:126,15,0	1/1:17,0:18:9.09:56,9,0	0/0:29,0:29:63.21:0,63,1033	1/1:23,16:39:92.77:1936,93,0	1/1:10,13:23:50.18:1096,50,0	1/1:12,1:13:14.93:181,15,0
chr10	78213663	.	TA	T	1644.53	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.442;DP=706;FS=3.409;HRun=1;HaplotypeScore=199.3178;InbreedingCoeff=0.9414;MQ=54.50;MQ0=5;MQRankSum=0.784;QD=29.90;ReadPosRankSum=0.883;VQSLOD=3.3136;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,1:45:99:0,109,1673	0/0:8,0:8:24.08:0,24,380	0/0:32,0:19:17.48:0,17,509	0/0:29,0:20:57.18:0,57,868	0/0:16,0:16:44.89:0,45,706	0/0:21,0:21:51.17:0,51,813	0/0:17,0:17:51.17:0,51,799	0/0:26,0:25:75.25:0,75,1127	0/0:21,0:21:57.19:0,57,911	0/0:37,0:37:99:0,111,1684	0/0:26,0:26:68.97:0,69,1087	0/0:12,0:12:18.06:0,18,262	0/0:32,0:32:78.22:0,78,1097	0/0:21,0:21:57.19:0,57,902	0/0:35,0:35:87.30:0,87,1378	0/0:27,0:27:72.25:0,72,1151	0/0:20,0:20:43.23:0,43,674	0/0:10,0:9:18.06:0,18,280	0/0:25,0:25:75.24:0,75,1118	0/0:42,0:42:57.68:0,58,777	0/0:24,0:24:17.87:0,18,266	0/0:24,0:24:38.33:0,38,527	0/0:31,0:31:8.85:0,9,373	0/0:16,0:16:14.26:0,14,175	0/0:26,0:26:75.26:0,75,1197	1/1:7,38:45:34.14:1507,34,0	0/0:27,0:27:46.98:0,47,674	1/1:0,10:10:21.03:258,21,0
chr10	78213667	.	T	TAGAC	6188.30	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=1.842;DP=704;FS=2.911;HRun=0;HaplotypeScore=218.7515;InbreedingCoeff=0.9090;MQ=53.74;MQ0=5;MQRankSum=-9.081;QD=23.18;ReadPosRankSum=-1.600;VQSLOD=4.4572;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:90.08:0,90,1261	0/0:9,0:9:20.85:0,21,328	0/0:28,0:14:5.80:0,6,43	0/0:26,0:17:36.09:0,36,496	0/0:17,0:17:32.67:0,33,503	0/0:20,0:20:45.12:0,45,710	0/0:16,0:16:39.11:0,39,606	1/1:27,0:27:55.41:656,55,0	0/0:21,0:21:42.11:0,42,658	0/0:38,0:38:99:0,105,1539	0/0:27,0:27:53.73:0,54,883	1/1:14,1:15:14.96:272,15,0	1/1:18,13:31:70.91:1332,71,0	0/0:23,0:23:54.13:0,54,835	0/0:36,0:36:72.23:0,72,1190	0/0:27,0:27:66.17:0,66,1009	0/0:20,0:20:7.20:0,7,477	1/1:7,2:8:12.04:244,12,0	1/1:17,6:23:45.84:870,46,0	1/1:31,9:40:51.14:1087,51,0	1/1:10,12:25:3:25,3,0	1/1:13,9:22:24.07:485,24,0	1/1:17,13:30:11.37:320,11,0	1/1:12,1:15:6.02:150,6,0	0/0:26,0:26:60.19:0,60,985	0/0:44,0:48:73.39:0,73,912	1/1:7,20:30:34.87:746,35,0	0/0:10,0:10:7.93:0,8,180
chr10	78213715	.	TGATA	T	2582.87	PASS	AB=1.000;AC=14;AF=0.269;AN=52;BaseQRankSum=1.674;DP=708;FS=2.477;HRun=0;HaplotypeScore=189.8550;InbreedingCoeff=0.7242;MQ=54.05;MQ0=9;MQRankSum=1.786;QD=13.04;ReadPosRankSum=1.937;VQSLOD=3.5644;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:44:53.85:0,54,1004	1/1:3,6:9:9.03:141,9,0	./.	./.	1/1:7,13:20:26.98:424,27,0	0/0:10,0:23:21.06:0,21,339	0/0:10,0:20:14.41:0,14,201	0/0:35,0:32:23.90:0,24,236	0/0:10,0:23:24.08:0,24,411	1/1:18,18:36:51.17:791,51,0	1/1:12,17:29:29.68:470,30,0	0/0:2,0:18:24.06:0,24,341	0/0:17,0:40:12.48:0,12,141	1/1:9,20:29:30.10:471,30,0	1/1:14,0:28:15.02:140,15,0	0/0:10,0:24:29.92:0,30,488	0/0:9,0:23:9.45:0,9,155	0/0:8,0:11:5.59:0,6,33	0/0:27,0:27:36.12:0,36,845	0/0:33,0:33:33.11:0,33,762	0/0:24,0:24:36.12:0,36,827	0/0:8,0:21:15.05:0,15,224	0/0:13,0:33:15.92:0,16,208	0/0:12,0:16:3.26:0,3,10	0/0:15,0:33:15.94:0,16,424	0/1:39,0:38:28.73:307,0,29	0/0:27,0:27:42.14:0,42,969	0/1:8,0:8:16.54:20,0,17
chr10	78213749	.	ATAGATAGG	A	1855.83	PASS	AB=0.904;AC=4;AF=0.071;AN=56;BaseQRankSum=1.029;DP=703;FS=0.000;HRun=0;HaplotypeScore=197.4996;InbreedingCoeff=0.5127;MQ=59.68;MQ0=6;MQRankSum=-3.778;QD=26.14;ReadPosRankSum=-0.382;VQSLOD=2.6724;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:43:93.42:0,93,2043	0/0:8,0:8:15.04:0,15,199	0/0:16,0:12:9.12:0,9,191	0/0:13,0:6:2.83:0,3,98	0/0:21,0:21:44.98:0,45,480	0/0:24,0:24:45.04:0,45,1020	0/0:16,0:16:26.97:0,27,473	0/0:34,0:31:77.86:0,78,917	0/0:27,0:27:63:0,63,1262	0/0:36,0:36:97.91:0,98,1081	0/0:33,0:33:69.08:0,69,775	0/0:23,0:23:42.08:0,42,816	0/0:33,0:33:31.20:0,31,421	0/0:29,0:29:57.05:0,57,628	0/1:17,0:17:51.92:261,0,52	0/0:31,0:30:63.09:0,63,1277	0/0:25,0:25:33.93:0,34,459	0/0:10,0:9:14.89:0,15,180	0/0:22,0:21:62.39:0,62,1658	0/0:25,0:25:60.07:0,60,1570	0/0:24,0:24:54.12:0,54,1690	0/0:25,0:25:42:0,42,646	0/0:30,0:30:42.85:0,43,550	0/0:20,0:20:10.54:0,11,348	0/0:35,0:35:61.99:0,62,1236	0/1:29,9:37:1.95:1384,0,2	0/0:29,0:29:66.14:0,66,2040	1/1:15,1:16:23.93:326,24,0
chr10	78214030	.	CT	C	4665.42	PASS	AB=0.774;AC=16;AF=0.286;AN=56;BaseQRankSum=-4.594;DP=593;FS=2.754;HRun=3;HaplotypeScore=140.0538;InbreedingCoeff=-0.4062;MQ=48.12;MQ0=8;MQRankSum=3.191;QD=12.64;ReadPosRankSum=-0.842;VQSLOD=3.1557;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:48.47:0,48,801	0/1:5,7:12:99:221,0,163	0/0:6,0:3:0:0,0,0	0/0:15,0:5:8.94:0,9,121	0/1:16,6:22:99:297,0,334	0/0:10,0:10:5.61:0,6,53	0/1:9,9:18:99:248,0,255	0/1:24,20:41:99:492,0,607	0/0:27,0:27:14.68:0,15,159	0/1:12,18:30:99:546,0,350	0/1:25,0:25:99:199,0,310	0/0:21,0:21:14.23:0,14,50	0/1:16,2:17:28.64:29,0,283	0/0:13,0:13:13.83:0,14,159	0/0:15,0:15:11.63:0,12,137	0/0:16,0:16:11.35:0,11,88	0/1:12,12:24:99:304,0,283	0/1:11,9:19:21.83:225,0,22	0/1:10,3:11:99:114,0,224	0/1:17,21:38:99:656,0,582	0/1:3,1:4:30.26:30,0,36	0/1:20,1:21:99:135,0,120	0/0:28,0:28:20.10:0,20,110	0/0:14,0:14:0.30:0,0,5	0/0:32,0:32:31.35:0,31,289	0/1:25,0:25:99:244,0,334	0/1:13,29:42:99:906,0,367	0/1:12,1:12:18.55:19,0,98
chr10	78214031	.	T	TTTCTTTCTTTC	17673.28	PASS	AB=0.932;AC=48;AF=0.889;AN=54;BaseQRankSum=0.182;DP=618;FS=1.408;HRun=0;HaplotypeScore=179.6445;InbreedingCoeff=0.3544;MQ=49.02;MQ0=8;MQRankSum=-1.172;QD=31.06;ReadPosRankSum=2.110;VQSLOD=4.1128;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:34.18:0,34,1081	1/1:12,0:12:31.28:661,31,0	./.	0/0:17,0:5:9.50:0,10,127	1/1:19,1:23:51.14:1228,51,0	1/1:1,10:14:3.01:166,3,0	0/1:17,0:17:34.04:420,0,34	1/1:41,0:39:23.37:904,23,0	1/1:4,24:30:3.01:166,3,0	1/1:30,0:30:71.21:1472,71,0	1/1:6,19:28:36.11:595,36,0	1/1:0,0:22:18.06:630,18,0	1/1:13,0:18:47.19:1172,47,0	1/1:4,10:16:6.02:331,6,0	1/1:3,12:17:3.01:166,3,0	1/1:3,13:16:5.95:332,6,0	1/1:25,0:25:51.17:1168,51,0	0/1:16,0:18:38.35:148,0,38	1/1:13,0:11:0.84:265,1,0	1/1:39,0:39:34.33:1266,34,0	1/1:2,0:2:3.01:77,3,0	1/1:4,0:22:37:1020,37,0	1/1:3,0:30:24.55:709,25,0	1/1:2,0:15:5.98:134,6,0	1/1:6,26:34:18.02:850,18,0	1/1:5,0:27:62.55:1455,63,0	1/1:42,0:42:99:1976,101,0	1/1:4,0:15:15.05:361,15,0
chr10	78214038	.	CT	C	233.48	PASS	AB=0.935;AC=5;AF=0.089;AN=56;BaseQRankSum=3.131;DP=596;FS=5.586;HRun=3;HaplotypeScore=153.8678;InbreedingCoeff=-0.1145;MQ=48.01;MQ0=9;MQRankSum=-3.289;QD=1.85;ReadPosRankSum=-1.082;VQSLOD=-0.7271;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:49.46:0,49,735	0/0:13,0:13:39.04:0,39,465	0/0:4,0:2:2.98:0,3,22	0/0:14,0:6:9.73:0,10,153	0/0:25,0:25:54.04:0,54,710	0/0:14,0:14:5.96:0,6,55	0/0:17,0:17:45.15:0,45,607	0/1:39,2:39:18.14:18,0,1003	0/0:29,0:29:11.91:0,12,110	0/0:31,0:31:90.02:0,90,1010	0/0:24,0:24:41.56:0,42,471	0/1:22,0:22:1.73:2,0,90	0/1:11,7:17:99:264,0,127	0/0:16,0:16:17.88:0,18,168	0/0:16,0:16:5.97:0,6,55	0/0:12,0:12:8.94:0,9,81	0/0:23,0:23:50.63:0,51,559	0/0:17,0:16:37.80:0,38,406	0/0:13,0:11:17.63:0,18,329	0/0:44,0:43:99:0,123,1600	0/0:2,0:2:3.01:0,3,43	0/0:19,0:19:42.98:0,43,320	0/1:28,0:28:46.44:46,0,111	0/1:17,0:17:7.54:8,0,94	0/0:30,0:30:29.87:0,30,277	0/0:25,0:25:43:0,43,625	0/0:41,0:41:99:0,120,1552	0/0:18,0:16:20.30:0,20,179
chr10	78214046	.	C	CTTT	1217.53	PASS	AB=0.983;AC=17;AF=0.304;AN=56;BaseQRankSum=11.116;DP=584;FS=1.958;HRun=3;HaplotypeScore=161.3066;InbreedingCoeff=-0.3134;MQ=51.77;MQ0=8;MQRankSum=-9.452;QD=3.66;ReadPosRankSum=-1.084;VQSLOD=-0.7002;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:25.05:0,25,708	0/1:14,0:14:42.14:42,0,351	0/0:14,0:4:5.99:0,6,67	0/0:21,0:12:17.62:0,18,275	0/0:29,0:29:22.90:0,23,712	0/1:12,0:12:3.01:3,0,39	0/1:16,0:16:23.83:24,0,378	0/0:31,0:30:63.66:0,64,864	1/1:23,0:23:2.50:9,2,0	0/1:36,0:37:78.01:78,0,752	0/0:21,0:21:28.31:0,28,372	0/1:20,0:20:15.34:15,0,31	0/1:20,0:19:63.23:63,0,236	0/1:11,0:11:25.13:25,0,33	0/1:14,0:14:5.54:6,0,59	0/1:12,0:12:9.11:9,0,19	0/0:27,0:27:15.84:0,16,628	0/0:16,0:15:9.97:0,10,360	0/1:9,0:8:33.96:34,0,219	0/1:36,4:39:99:463,0,999	0/0:2,0:2:5.94:0,6,43	0/0:21,0:21:11.33:0,11,376	0/0:24,0:24:2.48:0,2,176	0/1:17,0:17:21.36:21,0,144	0/1:26,0:26:26.16:26,0,70	0/0:22,0:22:22.20:0,22,466	0/1:38,7:45:99:546,0,1124	0/1:17,0:15:3.12:3,0,118
chr10	78214059	.	C	CGCCT	259.02	PASS	AB=0.946;AC=6;AF=0.107;AN=56;BaseQRankSum=4.608;DP=608;FS=0.998;HRun=0;HaplotypeScore=171.5235;InbreedingCoeff=0.0948;MQ=55.05;MQ0=8;MQRankSum=-4.083;QD=2.12;ReadPosRankSum=-2.963;VQSLOD=2.2931;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:56.22:0,56,1104	0/1:11,2:13:99:126,0,608	0/0:26,0:6:15.05:0,15,301	0/0:41,0:21:21.27:0,21,702	0/1:27,1:28:99:114,0,1424	0/0:11,0:11:5.98:0,6,83	0/0:17,0:17:47.81:0,48,895	0/0:26,0:26:75.22:0,75,1480	1/1:19,0:19:2.88:15,3,0	0/1:37,2:39:99:112,0,1796	0/1:23,0:23:1.28:1,0,1039	0/0:20,0:20:24.08:0,24,463	0/0:16,0:16:43.75:0,44,888	0/0:15,0:15:2.21:0,2,245	0/0:14,0:14:0.51:0,1,177	0/0:13,0:13:13.23:0,13,211	0/0:26,0:26:65.21:0,65,1256	0/0:15,0:14:33.11:0,33,692	0/0:10,0:9:27.09:0,27,543	0/0:39,0:38:99:0,107,1943	0/0:5,0:5:9.03:0,9,188	0/0:21,0:21:57.20:0,57,1146	0/0:25,0:25:47.89:0,48,811	0/0:16,0:16:18.05:0,18,350	0/0:24,0:24:20.89:0,21,268	0/0:25,0:25:75.24:0,75,1505	0/0:44,0:44:99:0,126,2233	0/0:16,0:15:21.07:0,21,411
chr10	78214103	.	CCTTT	C	2772.05	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=1.618;DP=612;FS=4.684;HRun=0;HaplotypeScore=160.6679;InbreedingCoeff=0.9548;MQ=56.53;MQ0=7;MQRankSum=-3.589;QD=31.15;ReadPosRankSum=2.243;VQSLOD=3.6384;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.16:0,60,1252	0/0:10,0:10:21.07:0,21,421	0/0:45,0:19:35.08:0,35,821	0/0:43,0:15:13:0,13,305	0/0:36,0:36:75.05:0,75,1673	0/0:10,0:10:9.03:0,9,224	0/0:20,0:19:48.16:0,48,1060	0/0:36,0:36:81.22:0,81,1706	0/0:14,0:14:15.05:0,15,334	0/0:39,0:39:84.28:0,84,1928	0/0:36,0:36:69.23:0,69,1349	1/1:10,4:14:15.05:235,15,0	1/1:3,15:17:48.16:777,48,0	0/0:15,0:15:33.11:0,33,792	0/0:13,0:13:24.08:0,24,602	0/0:19,0:19:42.14:0,42,1048	0/0:27,0:27:65.83:0,66,1105	0/0:12,0:12:27.01:0,27,528	0/0:14,0:12:33.11:0,33,710	0/0:35,0:35:87.29:0,87,1972	0/0:5,0:5:15.01:0,15,260	1/1:7,15:22:54.08:780,54,0	1/1:8,15:23:48.16:797,48,0	1/1:6,6:12:24.03:357,24,0	0/0:23,0:23:45.15:0,45,921	0/0:18,0:18:39.13:0,39,879	0/0:22,0:22:54.18:0,54,1181	0/0:11,0:11:9.03:0,9,226
chr10	78214142	.	T	TCTCTCTCTCTCA	42652.33	PASS	AB=0.980;AC=47;AF=0.839;AN=56;BaseQRankSum=2.182;DP=615;FS=0.609;HRun=0;HaplotypeScore=232.1735;InbreedingCoeff=0.6225;MQ=46.45;MQ0=7;MQRankSum=-8.768;QD=82.50;ReadPosRankSum=4.221;VQSLOD=4.2272;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:47.18:0,47,1451	1/1:3,8:11:27.09:1453,27,0	0/0:40,0:25:35.93:0,36,1056	0/0:37,0:18:29.80:0,30,892	1/1:12,26:40:39.13:2257,39,0	1/1:8,0:19:33.11:1542,33,0	0/1:15,0:16:5.90:653,0,6	0/1:40,0:36:1.35:2342,0,1	1/1:4,0:11:24.08:1212,24,0	1/1:21,9:31:75.26:3360,75,0	1/1:6,25:32:45.15:2611,45,0	1/1:15,0:15:39.08:1382,39,0	1/1:23,0:22:25.20:1975,25,0	1/1:9,4:13:27.09:1145,27,0	1/1:14,5:20:30.09:1455,30,0	1/1:17,0:25:45.15:1923,45,0	1/1:14,0:16:2.38:442,2,0	1/1:7,0:8:13.29:605,13,0	1/1:11,0:14:30.10:1105,30,0	1/1:22,0:33:72.22:3021,72,0	0/1:7,0:7:13.74:149,0,14	1/1:28,0:28:66.23:2835,66,0	1/1:27,0:27:60.19:2235,60,0	1/1:13,0:13:21.06:744,21,0	1/1:12,1:25:72.21:2989,72,0	1/1:13,0:20:48.64:2108,49,0	1/1:14,0:24:58.44:2637,58,0	1/1:5,0:6:14.68:474,15,0
chr10	78214144	.	T	TCTCTCTCTCTCACA	47939.33	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=-0.698;DP=624;FS=2.785;HRun=0;HaplotypeScore=240.9629;InbreedingCoeff=0.6907;MQ=47.04;MQ0=7;MQRankSum=-10.076;QD=90.79;ReadPosRankSum=6.053;VQSLOD=4.6622;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:48.04:0,48,1671	1/1:11,0:11:27.09:1026,27,0	0/0:37,0:24:39.11:0,39,1286	0/0:38,0:18:23.82:0,24,1071	1/1:39,0:39:38.78:1538,39,0	1/1:19,0:19:33.11:1861,33,0	1/1:13,1:14:15.05:855,15,0	1/1:37,0:33:12.18:2595,12,0	1/1:10,0:11:24.08:1482,24,0	1/1:31,0:31:35.22:2080,35,0	1/1:29,0:29:45.15:1782,45,0	1/1:11,5:18:45.15:2350,45,0	1/1:14,12:26:54.19:3466,54,0	1/1:13,0:13:4.48:664,4,0	1/1:20,0:20:9.55:909,10,0	1/1:24,0:24:45.15:2234,45,0	1/1:15,0:15:14.48:558,14,0	1/1:9,0:9:15.03:719,15,0	0/1:15,0:15:7.87:1128,0,8	1/1:33,0:33:51.27:3695,51,0	0/1:7,0:7:4.11:181,0,4	1/1:12,17:30:78.17:4623,78,0	1/1:26,8:36:66.23:3732,66,0	1/1:13,1:15:18.06:985,18,0	1/1:26,0:26:67.46:3488,67,0	1/1:18,0:19:48.16:2386,48,0	1/1:24,0:24:38.21:3140,38,0	1/1:6,0:6:15:464,15,0
chr10	78214492	.	C	CA	3040.42	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-9.910;DP=630;FS=0.409;HRun=8;HaplotypeScore=63.7020;InbreedingCoeff=0.8674;MQ=74.43;MQ0=0;MQRankSum=-0.115;QD=24.13;ReadPosRankSum=0.786;VQSLOD=4.2797;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.03:0,75,686	0/0:16,0:16:45:0,45,407	0/0:13,0:14:23:0,23,185	0/1:11,0:11:8.84:9,0,114	0/0:26,0:26:63.02:0,63,577	0/0:25,0:24:66.03:0,66,604	0/0:11,0:11:30:0,30,270	0/0:40,1:41:67.40:0,67,868	0/0:25,0:25:66.03:0,66,604	0/0:26,0:26:66.02:0,66,604	0/0:22,0:22:51:0,51,461	1/1:4,21:25:57.17:658,57,0	1/1:3,24:27:72.21:830,72,0	0/0:28,0:28:84.03:0,84,764	0/0:20,0:20:51.01:0,51,462	0/0:24,0:24:66.03:0,66,604	0/0:23,0:23:63.02:0,63,577	0/0:10,0:10:28.26:0,28,250	0/0:15,0:15:4.47:0,4,295	0/0:42,0:43:99:0,107,967	0/0:19,0:19:51.03:0,51,467	1/1:2,19:21:54.16:620,54,0	1/1:5,23:28:41.70:719,42,0	1/1:0,14:14:33.10:381,33,0	0/0:16,0:16:42.01:0,42,384	0/0:29,0:29:81.04:0,81,741	0/0:40,0:38:99:0,117,1071	0/0:5,0:5:15.01:0,15,137
chr10	78215200	.	C	CAG	2896.92	PASS	AB=0.784;AC=12;AF=0.214;AN=56;BaseQRankSum=-1.081;DP=645;FS=1.013;HRun=0;HaplotypeScore=160.3746;InbreedingCoeff=0.3500;MQ=66.14;MQ0=5;MQRankSum=-1.383;QD=14.56;ReadPosRankSum=-2.639;VQSLOD=3.2923;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:46:99:0,111,1295	0/0:4,0:4:6.02:0,6,72	0/1:32,0:20:15.59:16,0,60	0/0:41,0:27:11.57:0,12,306	0/0:17,0:18:26.86:0,27,289	0/1:10,8:18:44.83:306,0,45	0/1:14,11:24:23.20:475,0,23	0/0:30,0:29:29.86:0,30,539	1/1:4,16:20:48.16:763,48,0	0/0:14,0:15:34.61:0,35,383	0/0:12,0:12:8.90:0,9,108	0/0:30,0:33:24.76:0,25,463	0/0:29,0:31:50.73:0,51,532	0/0:15,0:15:18.04:0,18,201	0/0:21,0:23:29.32:0,29,356	0/1:10,16:26:17.56:710,0,18	0/1:13,7:19:41.87:319,0,42	1/1:6,1:26:22.24:187,22,0	0/0:20,0:18:27.06:0,27,310	0/0:23,0:23:23.78:0,24,266	0/0:28,0:30:38.78:0,39,418	0/1:17,0:18:4.13:4,0,111	0/0:17,0:17:22.68:0,23,263	0/0:23,0:27:28.86:0,29,309	1/1:8,5:12:18.05:283,18,0	0/0:26,0:27:23.14:0,23,611	0/0:24,0:26:15.02:0,15,501	0/0:6,0:5:12.04:0,12,144
chr10	78215242	.	GAGAGAC	G	4175.60	PASS	AB=0.880;AC=24;AF=0.444;AN=54;BaseQRankSum=-2.238;DP=566;FS=22.951;HRun=0;HaplotypeScore=210.9618;InbreedingCoeff=0.7849;MQ=45.89;MQ0=12;MQRankSum=-1.275;QD=19.33;ReadPosRankSum=0.178;VQSLOD=1.2895;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:87.28:0,87,2624	1/1:1,3:3:6.02:123,6,0	./.	0/0:13,0:3:3.01:0,3,42	1/1:6,13:19:2.92:17,3,0	1/1:8,7:15:24.53:433,25,0	1/1:25,3:25:24.01:391,24,0	0/0:30,0:26:24.23:0,24,174	1/1:12,11:23:33.11:696,33,0	1/1:3,16:19:42.01:755,42,0	1/1:3,8:10:2.79:17,3,0	0/0:30,0:34:45.50:0,45,767	0/0:22,0:23:25.85:0,26,248	1/1:1,13:14:6.02:128,6,0	1/1:6,18:24:15.52:320,16,0	1/1:12,7:19:39.12:774,39,0	0/1:13,6:18:2.22:257,0,2	0/0:17,0:17:14.89:0,15,190	0/0:20,0:16:32.47:0,32,311	0/0:30,0:29:36.83:0,37,455	0/0:21,0:21:18.01:0,18,223	0/0:16,0:17:14.56:0,15,224	0/1:13,0:12:0.08:0,0,0	0/0:28,0:29:25.81:0,26,250	1/1:6,2:8:15.03:264,15,0	0/0:25,0:25:21.44:0,21,304	0/0:28,0:28:59.81:0,60,1062	0/0:5,0:4:3.01:0,3,31
chr10	78215264	.	GAC	G	514.20	PASS	AB=0.978;AC=26;AF=0.464;AN=56;BaseQRankSum=6.812;DP=522;FS=4.295;HRun=0;HaplotypeScore=185.9403;InbreedingCoeff=-0.1097;MQ=49.22;MQ0=7;MQRankSum=-4.251;QD=1.43;ReadPosRankSum=-1.326;VQSLOD=2.2270;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.23:0,87,1464	1/1:3,0:3:2.03:4,2,0	0/0:13,0:3:3.07:0,3,61	0/0:28,1:14:19.38:0,19,228	0/0:13,0:13:2.99:0,3,43	1/1:13,0:13:9.80:25,10,0	0/1:20,0:17:1.04:1,0,206	0/0:34,0:32:13.23:0,13,1168	1/1:17,0:17:16.19:46,16,0	0/1:21,0:21:3.98:4,0,247	0/0:9,0:8:2.99:0,3,43	0/1:25,2:27:82.72:83,0,618	0/1:22,3:25:99:115,0,294	1/1:13,0:13:3.11:9,3,0	1/1:18,0:18:7.77:22,8,0	0/1:19,0:19:27.46:27,0,123	0/1:18,0:17:10.34:10,0,34	0/1:13,1:14:7.56:8,0,189	0/1:18,0:15:99:110,0,335	0/1:30,0:29:4.86:5,0,667	0/1:19,0:19:28.85:29,0,245	0/0:18,2:20:2.47:0,2,375	0/0:12,1:12:9.03:0,9,164	0/1:27,2:29:64.18:64,0,303	0/1:8,0:8:4.71:5,0,34	0/1:20,0:20:19.98:20,0,581	0/1:23,0:23:42.60:43,0,674	1/1:3,1:3:3.01:43,3,0
chr10	78215320	.	AAGGGAGGGAGGGAGGG	A	5564.27	PASS	AC=26;AF=0.481;AN=54;BaseQRankSum=-0.594;DP=326;FS=27.488;HRun=0;HaplotypeScore=148.5490;InbreedingCoeff=0.6876;MQ=60.20;MQ0=6;MQRankSum=-3.777;QD=32.73;ReadPosRankSum=1.957;VQSLOD=2.6427;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:15.01:0,15,631	./.	0/0:24,0:11:3.45:0,3,23	0/0:23,0:11:2.35:0,2,63	0/0:6,0:6:5.97:0,6,120	0/0:4,0:4:6.02:0,6,193	0/0:15,0:15:33.08:0,33,731	1/1:8,12:19:25.36:553,25,0	0/0:12,0:12:24.08:0,24,743	0/0:6,0:6:6.02:0,6,282	0/0:3,0:3:3.01:0,3,123	1/1:4,5:8:9.03:361,9,0	1/1:5,16:21:30.10:1230,30,0	0/0:7,0:7:3.01:0,3,84	0/0:5,0:5:3.01:0,3,196	0/0:10,0:10:21.07:0,21,682	0/0:8,0:8:9:0,9,309	1/1:4,0:4:2.17:22,2,0	1/1:8,0:8:6.02:119,6,0	1/1:10,12:22:33.11:1040,33,0	1/1:11,1:11:6:105,6,0	1/1:2,9:11:9.03:341,9,0	1/1:5,10:15:12.04:460,12,0	1/1:7,9:16:6.49:180,6,0	0/0:13,0:13:25.32:0,25,786	1/1:8,9:17:31.29:811,31,0	1/1:3,10:13:6.02:208,6,0	1/1:0,2:2:3.01:134,3,0
chr10	78215321	.	AGGG	A	478.51	PASS	AB=0.902;AC=16;AF=0.296;AN=54;BaseQRankSum=5.751;DP=316;FS=5.978;HRun=3;HaplotypeScore=102.4421;InbreedingCoeff=-0.2958;MQ=58.70;MQ0=7;MQRankSum=-5.372;QD=2.69;ReadPosRankSum=6.127;VQSLOD=-0.6609;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.10:0,48,629	./.	0/0:22,0:11:7.38:0,7,176	0/0:20,0:9:17.34:0,17,191	0/0:6,0:6:11.99:0,12,128	0/1:3,1:4:18.14:54,0,18	0/1:13,4:15:55.80:56,0,94	0/0:19,0:19:41.15:0,41,464	0/1:9,2:11:26.47:103,0,26	0/0:6,0:6:18.06:0,18,254	0/0:2,0:2:5.95:0,6,79	0/1:9,0:8:15.57:16,0,126	0/1:21,0:21:28.19:28,0,175	0/0:5,0:5:3.01:0,3,51	0/0:6,0:6:6.02:0,6,125	0/1:8,2:10:42.48:103,0,42	0/1:5,3:8:17.10:69,0,17	0/1:4,0:4:0.29:0,0,63	0/0:8,0:8:24.06:0,24,275	0/1:22,0:22:5.43:5,0,438	0/0:12,0:11:14.93:0,15,149	0/1:10,0:10:10.84:11,0,60	0/1:15,0:15:11.67:12,0,91	0/1:15,0:15:8.58:9,0,152	0/1:8,3:13:26.68:138,0,27	0/1:15,0:16:7.29:7,0,258	0/0:13,0:13:3.22:0,3,132	1/1:2,0:2:2.68:11,3,0
chr10	78215384	.	CAGAG	C	1662.84	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=5.052;DP=433;FS=3.147;HRun=0;HaplotypeScore=92.7117;InbreedingCoeff=0.8989;MQ=58.47;MQ0=10;MQRankSum=1.230;QD=36.15;ReadPosRankSum=0.450;VQSLOD=3.7274;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:24.07:0,24,564	./.	0/0:37,0:13:20.86:0,21,347	0/0:71,0:23:13.40:0,13,266	1/1:2,7:9:24.07:365,24,0	0/0:10,0:9:18.06:0,18,400	0/0:18,0:15:45.15:0,45,1024	0/0:26,0:26:60.13:0,60,1203	0/0:19,0:19:54.19:0,54,1363	1/1:1,13:14:39.10:633,39,0	1/1:2,9:11:14.10:379,14,0	0/0:9,0:7:21.07:0,21,544	0/0:16,0:16:30.10:0,30,749	1/1:1,3:4:5.57:107,6,0	1/1:0,8:8:21.07:344,21,0	0/0:10,0:10:27.08:0,27,584	0/0:19,0:19:54.13:0,54,1270	0/0:2,0:2:6.02:0,6,114	0/0:8,0:6:12.04:0,12,289	0/0:11,0:11:21.07:0,21,510	0/0:19,0:19:39.13:0,39,999	0/0:14,0:14:30.10:0,30,776	0/0:15,0:15:18.06:0,18,439	0/0:15,0:15:21.07:0,21,520	0/0:11,0:11:24.08:0,24,612	0/0:25,0:25:69.21:0,69,1590	0/0:18,0:18:36.12:0,36,905	0/0:4,0:4:6.02:0,6,156
chr10	78215467	.	GGAGAGAGACA	G	884.82	PASS	AB=0.750;AC=5;AF=0.096;AN=52;BaseQRankSum=5.777;DP=385;FS=3.958;HRun=0;HaplotypeScore=95.9171;InbreedingCoeff=0.5932;MQ=50.82;MQ0=42;MQRankSum=-3.964;QD=29.49;ReadPosRankSum=-0.889;VQSLOD=2.6717;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:9:15.05:0,15,683	0/0:6,0:6:15.05:0,15,763	./.	./.	0/0:7,0:6:15.05:0,15,685	0/0:12,0:12:33.11:0,33,1353	0/0:16,0:15:28.36:0,28,1105	0/0:26,0:11:20.98:0,21,481	0/0:14,0:14:32.98:0,33,1195	0/0:9,0:9:18.04:0,18,751	0/0:12,0:11:21.07:0,21,730	0/0:8,0:8:21.07:0,21,703	0/0:11,0:11:21.07:0,21,972	0/0:10,0:10:24.08:0,24,1204	0/0:6,0:6:6.02:0,6,305	0/0:11,0:11:30.10:0,30,1288	0/0:21,0:21:42.14:0,42,1872	0/1:2,1:3:83.27:83,0,296	0/0:10,0:4:6.02:0,6,268	0/0:11,0:10:30.10:0,30,1370	0/0:14,0:14:14.87:0,15,1156	0/0:19,0:19:51.18:0,51,2061	0/0:12,0:12:24.07:0,24,935	0/0:15,0:15:30.35:0,30,1032	0/0:8,0:8:24.08:0,24,965	1/1:10,11:21:30.10:825,30,0	0/0:16,0:15:39.13:0,39,1566	1/1:3,3:5:3.01:93,3,0
chr10	78215523	.	GGAGA	G	405.77	PASS	AB=0.967;AC=12;AF=0.231;AN=52;BaseQRankSum=1.190;DP=341;FS=9.709;HRun=0;HaplotypeScore=72.3491;InbreedingCoeff=0.5519;MQ=52.50;MQ0=10;MQRankSum=-0.413;QD=4.51;ReadPosRankSum=2.159;VQSLOD=0.6110;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:12:17.99:0,18,266	0/0:5,0:5:9.02:0,9,123	./.	0/0:19,0:7:2.94:0,3,18	0/0:10,0:10:9:0,9,99	1/1:9,2:10:5.93:63,6,0	0/0:10,0:14:5.74:0,6,36	0/0:25,0:23:21.18:0,21,140	1/1:12,11:23:5.12:93,5,0	0/0:10,0:10:11.95:0,12,141	0/0:5,0:5:3:0,3,25	0/0:9,0:13:5.82:0,6,96	0/0:10,0:17:12.01:0,12,154	0/0:13,0:13:9.02:0,9,139	0/0:8,0:8:12.02:0,12,173	1/1:11,0:11:11.83:150,12,0	0/1:13,0:14:1.36:52,0,1	1/1:4,0:6:6.01:56,6,0	0/0:6,0:5:11.98:0,12,125	./.	0/0:8,0:8:12.02:0,12,156	0/0:10,0:9:8.99:0,9,83	0/0:11,0:11:8.98:0,9,119	0/1:14,0:14:12.85:13,0,136	1/1:7,3:9:9.03:130,9,0	0/0:17,0:17:29.93:0,30,309	0/0:12,0:12:14.91:0,15,154	0/0:5,0:5:5.92:0,6,39
chr10	78215724	.	TA	T	4795.19	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=16.170;DP=668;FS=5.006;HRun=3;HaplotypeScore=75.0012;InbreedingCoeff=0.9983;MQ=84.26;MQ0=0;MQRankSum=-1.176;QD=33.77;ReadPosRankSum=2.931;VQSLOD=5.5139;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1617	0/0:6,0:6:18.06:0,18,259	0/0:26,0:26:69.20:0,69,924	0/0:17,0:17:44.93:0,45,575	0/0:28,0:28:84.28:0,84,1208	1/1:1,31:32:84.26:1041,84,0	1/1:0,19:19:51.16:632,51,0	0/0:46,0:46:99:0,135,1924	1/1:0,20:20:57.18:706,57,0	0/0:23,0:23:66.22:0,66,950	0/0:22,0:22:63.21:0,63,907	0/0:20,0:20:54.18:0,54,773	0/0:22,0:22:60.17:0,60,841	0/0:23,0:23:66.22:0,66,950	0/0:29,0:29:87.26:0,87,1228	1/1:0,18:18:48.15:595,48,0	1/1:2,36:38:99:1301,105,0	0/0:21,0:21:60.20:0,60,864	0/0:18,0:18:48.97:0,49,637	0/0:22,0:22:63.21:0,63,898	0/0:32,0:32:90.28:0,90,1275	0/0:22,0:22:66.20:0,66,917	0/0:19,0:19:54.17:0,54,759	0/0:32,0:32:90.29:0,90,1276	1/1:0,15:15:42.13:521,42,0	0/0:24,0:24:69.23:0,69,987	0/0:21,0:21:63.21:0,63,905	0/0:13,0:13:36.11:0,36,500
chr10	78215948	.	AT	A	6251.36	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-0.978;DP=602;FS=1.147;HRun=10;HaplotypeScore=88.8493;InbreedingCoeff=0.9982;MQ=81.04;MQ0=0;MQRankSum=-2.812;QD=15.75;ReadPosRankSum=1.560;VQSLOD=5.2678;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,2:36:44.15:0,44,943	1/1:0,0:12:22.41:66,22,0	0/0:28,1:24:28.96:0,29,379	0/0:20,0:17:28.35:0,28,260	1/1:3,0:26:42.77:126,43,0	0/0:5,0:17:37.09:0,37,196	0/0:8,0:24:51.78:0,52,315	1/1:6,30:36:89.91:768,90,0	0/0:4,0:19:45.76:0,46,249	1/1:5,0:27:44.81:132,45,0	1/1:2,0:21:39.54:122,40,0	1/1:1,7:9:23.99:208,24,0	1/1:4,15:19:35.99:313,36,0	1/1:1,0:25:44.81:132,45,0	1/1:0,0:15:28.52:84,29,0	0/0:6,0:14:28.74:0,29,180	0/0:3,1:26:36.94:0,37,310	1/1:0,14:15:38.03:319,38,0	1/1:6,14:20:41.94:354,42,0	1/1:1,34:35:86.96:755,87,0	1/1:1,12:13:29.71:260,30,0	1/1:0,20:20:50.94:436,51,0	1/1:0,22:22:56.67:495,57,0	1/1:2,20:22:41.99:365,42,0	0/0:3,0:19:45.79:0,46,265	1/1:3,25:28:74.94:641,75,0	1/1:2,20:22:53.98:469,54,0	1/1:2,8:10:23.99:208,24,0
chr10	78217621	.	C	CTT	3641.48	PASS	AC=20;AF=0.385;AN=52;BaseQRankSum=-1.404;DP=438;FS=4.987;HRun=10;HaplotypeScore=72.1398;InbreedingCoeff=0.9524;MQ=74.22;MQ0=0;MQRankSum=-3.442;QD=21.81;ReadPosRankSum=-3.203;VQSLOD=2.4082;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:20:47.43:0,47,506	0/0:7,0:7:12.01:0,12,122	0/0:14,1:14:31.32:0,31,278	0/0:13,0:13:26.13:0,26,250	0/0:11,0:11:30.02:0,30,293	0/0:12,0:12:33.05:0,33,329	0/0:22,0:22:29.78:0,30,462	1/1:3,4:24:54.42:511,54,0	0/0:21,0:21:54.02:0,54,522	0/0:19,0:18:22.32:0,22,372	0/0:13,0:13:33.05:0,33,329	1/1:2,0:12:24.03:228,24,0	1/1:4,1:17:14.94:147,15,0	0/0:18,0:18:1.57:0,2,256	0/0:24,0:24:65.93:0,66,651	0/0:19,0:19:23.06:0,23,421	0/0:24,0:24:60.01:0,60,586	0/0:16,0:16:42.01:0,42,401	1/1:6,9:17:35.75:444,36,0	1/1:6,13:19:48.13:660,48,0	1/1:0,12:12:18.90:245,19,0	1/1:4,0:13:15.96:141,16,0	1/1:2,1:12:15.03:159,15,0	1/1:2,2:21:43.31:434,43,0	0/0:16,0:16:42.07:0,42,426	./.	1/1:3,16:20:45.15:672,45,0	./.
chr10	78218827	.	CAGAGAG	C	268.88	PASS	AB=0.975;AC=12;AF=0.286;AN=42;BaseQRankSum=3.206;DP=601;FS=17.321;HRun=0;HaplotypeScore=127.4211;InbreedingCoeff=0.4759;MQ=68.59;MQ0=12;MQRankSum=-2.571;QD=1.89;ReadPosRankSum=1.149;VQSLOD=1.5232;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:18.06:0,18,386	0/0:8,0:7:6.02:0,6,153	./.	./.	0/0:17,0:16:9.03:0,9,216	0/0:17,0:19:9.03:0,9,239	0/0:16,0:16:10.28:0,10,211	0/0:29,0:26:7.77:0,8,20	0/0:19,0:19:6.02:0,6,182	0/0:37,0:33:21.07:0,21,572	0/0:17,0:17:3.01:0,3,79	./.	1/1:19,3:22:8.43:158,8,0	0/0:21,0:21:5.98:0,6,167	0/0:20,0:20:9.03:0,9,278	0/1:18,0:19:35.84:36,0,72	0/0:21,0:20:9.03:0,9,183	0/0:12,0:11:6.02:0,6,177	./.	1/1:25,0:25:3:26,3,0	./.	./.	1/1:21,1:22:3.01:37,3,0	0/1:24,0:24:0.07:0,0,0	0/0:33,0:33:9.02:0,9,209	./.	1/1:16,1:17:5.48:98,5,0	1/1:11,0:11:3.01:42,3,0
chr10	78218886	.	A	AGAGAGT	8339.83	PASS	AB=0.681;AC=47;AF=0.839;AN=56;BaseQRankSum=-0.389;DP=555;FS=10.397;HRun=0;HaplotypeScore=121.1394;InbreedingCoeff=0.6297;MQ=60.40;MQ0=15;MQRankSum=0.168;QD=17.48;ReadPosRankSum=0.233;VQSLOD=3.5279;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:72.72:0,73,596	1/1:8,0:8:20.82:165,21,0	0/0:24,0:16:17.52:0,18,210	0/0:25,0:7:14.17:0,14,190	1/1:16,0:16:33.90:319,34,0	1/1:23,0:22:62.44:518,62,0	1/1:0,0:30:2.51:14,3,0	1/1:39,0:38:85.04:859,85,0	1/1:23,0:23:54.58:424,55,0	1/1:25,0:25:63.76:545,64,0	1/1:12,0:11:22.69:216,23,0	1/1:14,0:14:35.89:296,36,0	1/1:23,0:21:9.85:358,10,0	0/1:3,18:26:0.02:168,0,0	1/1:23,0:23:59.09:475,59,0	0/1:1,16:21:16.06:98,0,16	1/1:14,0:13:35.81:314,36,0	1/1:11,0:11:29.46:216,29,0	1/1:20,0:20:56.02:448,56,0	1/1:16,0:16:41.60:331,42,0	1/1:25,0:24:55.14:445,55,0	1/1:11,0:10:23.42:176,23,0	1/1:15,0:15:38.99:338,39,0	1/1:22,0:22:54.94:427,55,0	1/1:8,0:8:20.95:170,21,0	1/1:13,0:13:37.99:281,38,0	1/1:29,0:29:59.57:645,60,0	0/1:9,0:8:3.74:92,0,4
chr10	78219470	.	G	GA	1073.05	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.051;DP=725;FS=1.552;HRun=1;HaplotypeScore=65.3999;InbreedingCoeff=0.9985;MQ=80.76;MQ0=0;MQRankSum=-0.698;QD=34.61;ReadPosRankSum=0.695;VQSLOD=3.6347;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:51:99:0,147,1892	0/0:10,0:10:30.10:0,30,390	0/0:21,0:21:57.17:0,57,723	0/0:15,0:15:42.12:0,42,534	0/0:31,0:31:87.28:0,87,1129	0/0:22,0:22:63.19:0,63,803	0/0:36,0:36:99:0,99,1255	0/0:22,0:22:66.21:0,66,857	0/0:25,0:25:75.24:0,75,974	0/0:31,0:31:93.30:0,93,1208	0/0:21,0:21:57.19:0,57,740	0/0:47,0:47:99:0,138,1774	0/0:35,0:35:96.29:0,96,1228	0/0:25,0:25:75.24:0,75,971	0/0:31,0:31:84.27:0,84,1091	0/0:21,0:21:60.17:0,60,749	0/0:31,0:31:93.29:0,93,1193	0/0:11,0:11:33.11:0,33,428	0/0:18,0:18:54.17:0,54,688	0/0:25,0:25:69.22:0,69,896	0/0:47,0:47:99:0,132,1699	0/0:28,0:28:81.20:0,81,1037	0/0:22,0:22:54.18:0,54,701	0/0:24,0:24:72.23:0,72,934	0/0:22,0:22:63.19:0,63,803	1/1:2,19:21:57.18:834,57,0	0/0:21,0:21:63.20:0,63,816	1/1:0,10:10:24.08:360,24,0
chr10	78222434	.	GCATGAGACCT	G	12614.84	PASS	AB=0.550;AC=21;AF=0.389;AN=54;BaseQRankSum=15.780;DP=538;FS=3.967;HRun=0;HaplotypeScore=175.6067;InbreedingCoeff=0.8947;MQ=91.72;MQ0=0;MQRankSum=-14.962;QD=65.70;ReadPosRankSum=0.646;VQSLOD=4.7436;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,6037	0/0:8,0:8:24.08:0,24,1281	0/0:24,0:24:72.22:0,72,3333	0/0:27,0:27:65.49:0,65,2782	0/0:27,0:27:81.28:0,81,4286	0/0:25,0:24:75.24:0,75,3489	0/0:18,0:18:54.19:0,54,2589	1/1:4,17:21:42.13:1326,42,0	0/0:11,0:11:30.10:0,30,1537	0/0:22,0:22:66.22:0,66,3195	0/0:23,0:23:66.23:0,66,3421	1/1:0,12:12:30.10:1000,30,0	1/1:1,14:15:36.12:1200,36,0	0/0:22,0:22:60.21:0,60,3189	0/0:24,0:24:72.23:0,72,3632	0/0:15,0:15:42.14:0,42,2195	0/0:20,0:20:60.21:0,60,3190	0/0:19,0:19:57.20:0,57,3041	1/1:5,12:17:30.08:853,30,0	1/1:8,22:30:60.21:1880,60,0	1/1:2,3:5:3.01:100,3,0	1/1:3,13:16:39.13:1300,39,0	1/1:4,13:17:30.10:1000,30,0	1/1:3,17:20:29.66:940,30,0	0/0:18,0:18:54.17:0,54,2748	0/1:4,18:22:99:1615,0,103	1/1:3,14:17:42.14:1400,42,0	./.
chr10	78222974	.	TGTGTGTGC	T	2297.07	PASS	AB=0.986;AC=27;AF=0.482;AN=56;BaseQRankSum=6.277;DP=667;FS=7.659;HRun=0;HaplotypeScore=268.9902;InbreedingCoeff=0.0412;MQ=42.10;MQ0=4;MQRankSum=-2.591;QD=4.76;ReadPosRankSum=-0.240;VQSLOD=1.3571;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,111,4091	0/1:8,0:8:0.77:45,0,1	0/1:21,0:6:29.29:29,0,119	0/1:31,0:12:44.63:45,0,337	1/1:22,1:23:4.70:86,5,0	0/1:23,3:26:48.56:126,0,49	1/1:34,1:34:9.95:355,10,0	0/1:29,0:26:99:111,0,291	0/1:21,1:22:7.51:110,0,8	1/1:28,1:29:21.18:396,21,0	0/0:15,1:16:0.47:0,0,1	0/1:29,0:29:10.25:10,0,183	0/1:23,0:23:12.02:12,0,569	1/1:32,2:34:45.64:388,46,0	1/1:18,1:19:16.36:147,16,0	1/1:28,2:30:36.90:253,37,0	0/1:14,0:14:7.99:42,0,8	0/1:24,0:24:99:105,0,483	0/1:27,0:26:68.31:68,0,446	0/0:19,0:19:8.15:0,8,51	0/0:31,0:29:23.96:0,24,167	0/0:14,0:14:15.03:0,15,250	0/0:24,0:25:18.34:0,18,255	0/0:27,0:26:8.37:0,8,205	1/1:13,1:14:10.72:64,11,0	0/1:25,1:25:43.69:44,0,976	0/1:19,0:18:37.97:38,0,163	0/0:4,0:4:5.89:0,6,127
chr10	78222976	.	TGTGTGC	T	5017.05	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=4.374;DP=652;FS=5.187;HRun=0;HaplotypeScore=242.5200;InbreedingCoeff=0.1241;MQ=41.79;MQ0=3;MQRankSum=-2.842;QD=9.34;ReadPosRankSum=0.143;VQSLOD=3.5485;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,114,3292	1/1:1,7:8:14.79:258,15,0	0/1:20,0:6:27.73:28,0,107	0/1:32,0:12:44.64:45,0,255	1/1:9,13:22:16.22:103,16,0	1/1:16,10:26:8.34:310,8,0	1/1:15,16:31:28.48:479,28,0	0/1:26,0:23:99:108,0,263	1/1:7,15:22:25.33:381,25,0	1/1:20,7:27:56.91:860,57,0	1/1:8,6:14:3.01:44,3,0	0/1:28,0:28:21.29:21,0,134	0/1:23,0:23:21.36:21,0,346	1/1:12,22:34:56.44:824,56,0	1/1:6,13:19:17.97:218,18,0	1/1:14,16:30:41.21:463,41,0	1/1:9,5:14:12.04:237,12,0	0/1:24,0:24:99:133,0,257	0/1:26,0:26:99:101,0,264	0/1:19,0:21:0.38:20,0,0	0/1:30,0:28:41.07:41,0,85	0/0:14,0:14:14.97:0,15,179	0/0:24,0:24:14.79:0,15,160	0/0:27,0:26:8.48:0,8,153	1/1:5,9:14:12:158,12,0	0/1:25,0:25:99:104,0,523	0/1:16,0:18:60.26:60,0,118	0/0:2,0:4:8.38:0,8,76
chr10	78222980	.	TGC	T	3388.90	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=4.200;DP=629;FS=17.059;HRun=0;HaplotypeScore=218.1679;InbreedingCoeff=0.3812;MQ=41.29;MQ0=5;MQRankSum=-1.892;QD=6.53;ReadPosRankSum=-2.424;VQSLOD=1.7901;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,113,1621	1/1:8,0:8:13.27:77,13,0	1/1:19,1:6:8.59:44,9,0	0/1:32,0:11:22.38:57,0,22	1/1:22,0:22:16.20:103,16,0	1/1:24,0:24:24.34:151,24,0	1/1:32,0:31:30.89:326,31,0	0/1:26,0:23:2.56:191,0,3	1/1:24,0:24:31.32:215,31,0	1/1:27,0:27:56.89:432,57,0	0/1:13,0:13:0:0,0,0	1/1:27,0:27:11.79:120,12,0	1/1:20,0:20:16.62:135,17,0	1/1:33,0:33:49.13:309,49,0	1/1:20,0:20:18.22:107,18,0	1/1:31,0:31:43.17:293,43,0	1/1:14,0:14:8.46:49,8,0	1/1:16,6:22:33.05:480,33,0	1/1:25,0:24:9.61:162,10,0	0/0:18,0:18:2:0,2,6	0/0:25,0:23:0.41:0,0,1	1/1:12,0:12:0.47:1,0,0	0/0:20,0:20:0.77:0,1,2	0/1:26,0:25:0.09:0,0,0	1/1:14,0:14:10.42:62,10,0	0/1:23,0:22:29.07:29,0,109	0/1:19,0:18:0.52:44,0,1	0/1:4,0:4:1.18:3,0,1
chr10	78222981	.	GCGCGCGTA	G	4060.16	PASS	AB=0.922;AC=28;AF=0.519;AN=54;BaseQRankSum=1.725;DP=628;FS=47.621;HRun=0;HaplotypeScore=252.6624;InbreedingCoeff=-0.5141;MQ=41.40;MQ0=5;MQRankSum=-4.133;QD=7.59;ReadPosRankSum=-2.694;VQSLOD=1.1315;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,123,4229	0/1:8,0:8:16.84:17,0,23	0/1:16,5:6:27.47:240,0,27	0/1:25,8:11:99:498,0,125	0/1:22,0:22:22.55:23,0,44	0/1:24,0:24:59.28:99,0,59	0/1:33,0:32:21.44:112,0,21	0/1:24,2:23:16.81:274,0,17	0/1:24,0:24:34.23:34,0,59	0/1:28,0:28:99:149,0,202	./.	0/1:15,12:27:13.63:289,0,14	0/1:15,3:19:44.39:430,0,44	0/1:33,0:33:24.37:175,0,24	1/1:20,0:20:8.91:49,9,0	0/1:31,0:31:49.24:49,0,51	0/1:15,0:15:5.17:5,0,8	1/1:22,0:22:1.84:405,2,0	0/1:20,0:19:99:266,0,178	0/0:16,2:18:2.51:0,3,6	1/1:22,3:23:12.47:92,12,0	0/1:11,1:12:15.97:69,0,16	1/1:19,1:20:9.34:79,9,0	0/1:17,9:25:0.42:0,0,21	0/0:14,0:14:0.34:0,0,4	0/1:20,3:22:99:470,0,462	0/1:15,4:18:40.98:222,0,41	0/1:4,0:4:14.03:14,0,119
chr10	78222982	.	C	CGTGTGT	1891.73	PASS	AB=0.977;AC=30;AF=0.556;AN=54;BaseQRankSum=-0.874;DP=624;FS=5.524;HRun=0;HaplotypeScore=256.3122;InbreedingCoeff=-0.0472;MQ=41.20;MQ0=5;MQRankSum=-3.603;QD=3.77;ReadPosRankSum=-4.823;VQSLOD=1.3778;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,120,2359	0/0:8,0:8:14.76:0,15,171	1/1:20,0:5:1.23:10,1,0	0/1:32,0:10:5.88:6,0,126	0/0:22,0:22:7.26:0,7,28	0/1:25,0:25:24.08:24,0,119	0/1:33,0:32:24.74:25,0,117	1/1:26,0:23:20.05:412,20,0	0/1:24,0:24:60.33:60,0,126	0/1:28,0:28:14.68:15,0,277	./.	1/1:27,0:27:4.97:60,5,0	0/1:18,0:19:16.89:59,0,17	0/1:33,0:33:42.39:42,0,363	0/1:20,0:20:7.01:7,0,141	0/1:31,0:31:14.44:14,0,173	0/0:15,0:15:9.03:0,9,119	0/1:21,0:21:13.57:14,0,220	1/1:18,2:19:25.71:533,26,0	0/1:16,2:18:0.25:1,0,0	0/1:23,0:21:6.16:20,0,6	1/1:10,0:11:5.22:32,5,0	0/1:17,0:19:1.22:8,0,1	1/1:24,0:24:2.83:25,3,0	0/0:15,0:15:7.38:0,7,102	0/1:22,1:22:28.96:320,0,29	1/1:15,4:18:9.95:147,10,0	1/1:2,2:4:8.98:217,9,0
chr10	78222983	.	GCGCGTA	G	2724.57	PASS	AB=0.958;AC=23;AF=0.426;AN=54;BaseQRankSum=1.968;DP=613;FS=14.459;HRun=0;HaplotypeScore=240.2579;InbreedingCoeff=-0.2030;MQ=41.30;MQ0=4;MQRankSum=-6.725;QD=6.53;ReadPosRankSum=-0.823;VQSLOD=0.9567;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,126,3706	0/0:8,0:8:5.12:0,5,20	0/1:20,0:5:38.36:144,0,38	0/1:33,0:10:99:317,0,108	0/0:22,0:22:16.29:0,16,110	0/1:25,0:25:94.34:94,0,106	0/1:33,0:32:37.91:38,0,286	0/1:22,1:20:62.46:189,0,62	0/0:24,0:24:10.93:0,11,170	0/1:29,0:29:11.96:12,0,336	./.	1/1:27,0:27:11.50:181,12,0	0/1:16,1:18:25.99:316,0,26	0/1:34,0:34:99:104,0,141	0/1:20,0:20:30.53:31,0,70	0/0:31,0:31:19.06:0,19,216	0/0:16,0:16:0.87:0,1,38	1/1:21,0:21:28.25:578,28,0	0/1:14,1:14:99:262,0,102	0/0:17,1:18:2.45:0,2,6	0/1:20,1:19:6.97:18,0,7	1/1:10,0:10:5.20:32,5,0	0/1:18,1:19:1.61:8,0,2	1/1:24,0:23:2.34:25,2,0	0/0:15,0:15:9.12:0,9,65	0/1:22,0:22:99:351,0,304	0/1:19,0:18:11.38:169,0,11	0/1:2,2:4:13.63:14,0,96
chr10	78222989	.	A	ATG	3946.91	PASS	AB=0.912;AC=39;AF=0.696;AN=56;BaseQRankSum=3.609;DP=624;FS=18.315;HRun=0;HaplotypeScore=224.3404;InbreedingCoeff=0.2068;MQ=40.80;MQ0=8;MQRankSum=-2.175;QD=7.65;ReadPosRankSum=-0.662;VQSLOD=1.4099;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:47:77.99:0,78,871	1/1:7,3:9:17.98:179,18,0	0/0:23,0:6:5.53:0,6,43	0/1:37,0:9:19.18:40,0,19	1/1:19,2:22:21.05:272,21,0	1/1:24,2:27:12.64:300,13,0	1/1:36,2:40:15.50:622,15,0	1/1:20,0:17:2.90:16,3,0	1/1:24,1:25:30.02:372,30,0	0/1:16,15:31:29.44:326,0,29	1/1:7,7:14:3:47,3,0	1/1:27,0:27:0.52:4,1,0	1/1:17,0:16:6.41:48,6,0	0/1:25,7:32:19.19:512,0,19	0/1:18,4:22:8:260,0,8	0/1:30,1:31:23.92:485,0,24	1/1:5,12:17:9.02:108,9,0	0/0:8,0:24:5.80:0,6,118	1/1:16,0:15:8.52:50,9,0	0/1:18,0:18:0.27:0,0,0	1/1:16,0:14:0.94:1,1,0	0/1:7,0:7:0:0,0,0	0/0:14,0:14:0.30:0,0,1	0/1:22,0:21:0.08:0,0,0	0/1:15,2:17:7.70:136,0,8	1/1:19,2:21:15.03:118,15,0	1/1:23,0:22:5.26:28,5,0	1/1:4,0:4:4.91:21,5,0
chr10	78223015	.	GCACA	G	1886.51	PASS	AB=0.602;AC=13;AF=0.250;AN=52;BaseQRankSum=2.833;DP=557;FS=0.573;HRun=0;HaplotypeScore=193.4213;InbreedingCoeff=0.6693;MQ=59.33;MQ0=9;MQRankSum=-7.162;QD=16.84;ReadPosRankSum=0.522;VQSLOD=3.3727;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,105,2583	0/0:8,0:7:15.05:0,15,302	0/0:46,0:17:50.65:0,51,690	0/0:46,0:19:41.94:0,42,706	0/0:14,0:14:20.94:0,21,484	0/0:24,0:24:57.19:0,57,1049	0/0:42,0:41:77.77:0,78,1747	1/1:1,15:16:35.95:519,36,0	0/0:22,0:22:51.13:0,51,960	0/0:25,0:25:57.17:0,57,1055	0/0:9,0:9:3:0,3,66	1/1:3,16:19:18.06:301,18,0	1/1:2,13:14:26.44:443,26,0	0/0:31,0:31:72.24:0,72,1327	0/0:24,0:24:51.16:0,51,961	0/0:27,0:27:63.16:0,63,1248	0/0:19,0:19:24.04:0,24,394	0/0:25,0:25:53.43:0,53,689	0/1:2,2:4:26.62:83,0,27	1/1:9,3:12:8.29:93,8,0	0/1:2,16:18:0:0,0,0	./.	0/0:1,3:4:0:0,0,0	0/0:4,13:17:0:0,0,0	0/0:13,0:13:24.08:0,24,483	0/1:4,7:11:99:243,0,116	1/1:1,16:17:22.93:371,23,0	./.
chr10	78223666	.	A	AAAAAG	5504.97	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=0.772;DP=561;FS=6.230;HRun=0;HaplotypeScore=153.6985;InbreedingCoeff=0.8212;MQ=39.80;MQ0=21;MQRankSum=-1.275;QD=13.56;ReadPosRankSum=-0.483;VQSLOD=3.7513;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:36.49:0,36,341	1/1:2,0:4:9.03:153,9,0	0/0:53,0:9:16.98:0,17,137	0/0:63,0:8:13.87:0,14,70	1/1:8,20:31:23.05:152,23,0	1/1:6,6:12:11.88:112,12,0	1/1:5,0:5:8.94:72,9,0	1/1:35,0:31:46.29:301,46,0	1/1:4,0:16:5.71:75,6,0	1/1:19,0:17:39.11:337,39,0	1/1:12,1:27:35.06:349,35,0	1/1:10,0:10:15.75:118,16,0	1/1:14,0:15:28.19:298,28,0	1/1:8,0:8:17.82:154,18,0	1/1:6,13:21:11.76:184,12,0	1/1:1,6:7:3:25,3,0	1/1:22,0:20:40.23:349,40,0	0/0:14,0:13:19.91:0,20,146	1/1:16,0:13:27.04:340,27,0	1/1:26,0:26:37.33:323,37,0	1/1:3,0:3:1.55:4,2,0	1/1:10,0:12:17.75:170,18,0	1/1:18,0:18:39.99:320,40,0	1/1:8,0:9:12.78:106,13,0	1/1:24,0:24:54.42:418,54,0	1/1:11,0:18:49.79:453,50,0	1/1:24,0:24:44.73:522,45,0	1/1:12,0:12:17.94:169,18,0
chr10	78223681	.	GA	G	2473.14	PASS	AB=0.984;AC=19;AF=0.339;AN=56;BaseQRankSum=4.816;DP=488;FS=2.833;HRun=9;HaplotypeScore=73.0894;InbreedingCoeff=0.8263;MQ=49.62;MQ0=17;MQRankSum=-5.116;QD=13.44;ReadPosRankSum=0.432;VQSLOD=3.7163;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:54.16:0,54,623	0/0:2,0:2:5.66:0,6,32	0/0:50,0:10:14.39:0,14,131	0/1:61,0:9:9.63:10,0,59	0/0:24,0:24:30.05:0,30,331	0/0:13,0:10:16.29:0,16,176	0/0:4,0:4:12.04:0,12,139	1/1:3,20:22:57.02:519,57,0	0/0:15,0:14:9.02:0,9,101	0/0:17,0:16:39.11:0,39,445	0/0:22,0:22:39.12:0,39,450	1/1:0,7:7:12:108,12,0	1/1:2,15:17:35.86:310,36,0	0/0:8,0:8:20.88:0,21,213	0/0:26,0:25:17.23:0,17,150	0/0:8,0:7:12.04:0,12,138	0/0:24,0:22:48.08:0,48,528	0/0:11,0:11:24.03:0,24,253	1/1:2,11:12:33.02:301,33,0	1/1:2,19:21:54.01:487,54,0	1/1:0,1:1:3:27,3,0	1/1:1,8:9:18:163,18,0	1/1:0,13:13:36.02:326,36,0	0/0:0,7:7:0.47:0,0,1	0/0:21,1:22:11.94:0,12,328	0/0:19,0:18:54.09:0,54,579	1/1:0,17:17:48.01:427,48,0	0/0:8,0:8:21.06:0,21,240
chr10	78223796	.	GTA	G	9478.08	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=14.036;DP=599;FS=4.191;HRun=0;HaplotypeScore=82.1753;InbreedingCoeff=0.9911;MQ=69.03;MQ0=2;MQRankSum=-2.618;QD=33.26;ReadPosRankSum=2.662;VQSLOD=7.2201;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:66.14:0,66,1081	0/0:4,0:4:9.03:0,9,165	0/0:19,0:18:54.16:0,54,880	0/0:22,0:20:59.81:0,60,969	0/0:36,0:36:96.31:0,96,1718	0/0:21,0:20:51.16:0,51,881	0/0:8,0:8:24.05:0,24,378	1/1:2,37:39:99:1472,111,0	0/0:14,0:14:30.08:0,30,473	0/0:25,0:25:75.24:0,75,1315	0/0:28,0:28:78.25:0,78,1362	1/1:0,18:18:39.13:557,39,0	1/1:4,16:20:33.11:472,33,0	0/0:17,0:17:42.14:0,42,762	0/0:26,0:25:51.15:0,51,867	0/0:10,0:9:24.05:0,24,379	0/0:24,0:24:66.18:0,66,1142	0/0:15,0:15:45.03:0,45,718	1/1:0,22:21:60.15:801,60,0	1/1:0,31:31:78.26:1115,78,0	1/1:1,28:29:69.23:986,69,0	1/1:0,22:22:48.05:685,48,0	1/1:0,26:26:60.04:847,60,0	1/1:0,14:14:36.12:514,36,0	0/0:16,0:16:45.04:0,45,633	1/1:0,25:25:72.22:1001,72,0	1/1:1,21:22:42.14:600,42,0	1/1:1,16:17:30.10:428,30,0
chr10	78228059	.	AG	A	7557.43	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=12.020;DP=665;FS=4.667;HRun=9;HaplotypeScore=190.4227;InbreedingCoeff=0.9945;MQ=82.49;MQ0=0;MQRankSum=-3.509;QD=21.97;ReadPosRankSum=4.097;VQSLOD=3.0692;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:72.20:0,72,821	1/1:2,4:6:11.98:110,12,0	0/0:28,0:28:61.81:0,62,687	0/0:13,0:13:19.60:0,20,206	1/1:9,21:30:56.96:516,57,0	1/1:5,14:19:38.94:357,39,0	1/1:3,17:20:47.92:429,48,0	0/0:31,0:31:65.91:0,66,384	1/1:2,28:30:78.01:714,78,0	1/1:3,30:32:89.99:823,90,0	1/1:7,19:26:56.98:521,57,0	0/0:26,0:26:67.93:0,68,438	0/0:22,0:22:51.77:0,52,324	1/1:1,17:18:48.03:439,48,0	1/1:4,40:44:99:1016,111,0	1/1:4,15:19:41.98:384,42,0	1/1:3,21:24:60.02:549,60,0	1/1:2,20:22:51.01:466,51,0	0/0:14,0:14:29.19:0,29,174	0/0:23,0:23:62.12:0,62,410	0/0:50,0:50:99:0,122,799	0/0:19,0:19:44.45:0,44,270	0/0:18,0:18:38.53:0,39,258	0/0:21,0:21:54.85:0,55,355	1/1:2,19:21:50.98:466,51,0	1/1:3,21:24:59.68:549,60,0	0/0:26,0:26:73.98:0,74,486	1/1:0,8:8:24.01:220,24,0
chr10	78228269	.	G	GT	13653.14	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-18.719;DP=761;FS=4.429;HRun=2;HaplotypeScore=82.9726;InbreedingCoeff=0.9994;MQ=81.83;MQ0=0;MQRankSum=-4.560;QD=38.24;ReadPosRankSum=3.407;VQSLOD=5.5446;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1270	1/1:2,7:9:24.08:339,24,0	0/0:29,0:29:75.23:0,75,910	0/0:26,0:26:54.67:0,55,793	1/1:1,28:29:84.24:1186,84,0	1/1:0,26:26:69.23:994,69,0	1/1:1,26:27:69.23:992,69,0	0/0:35,0:35:93.27:0,93,1128	1/1:1,17:18:48.16:691,48,0	1/1:1,26:27:75.19:1037,75,0	1/1:4,23:27:63.21:902,63,0	0/0:32,0:32:93.27:0,93,1136	0/0:39,0:39:99:0,117,1436	1/1:2,27:29:81.27:1165,81,0	1/1:1,31:31:81.27:1167,81,0	1/1:1,18:19:51.17:735,51,0	1/1:0,32:32:87.22:1253,87,0	1/1:1,23:24:66.19:928,66,0	0/0:28,0:28:72.23:0,72,889	0/0:32,0:32:90.28:0,90,1111	0/0:16,0:16:48.13:0,48,581	0/0:37,0:37:99:0,105,1276	0/0:24,0:24:69.20:0,69,841	0/0:35,0:35:99:0,102,1247	1/1:0,19:19:48.16:690,48,0	1/1:2,29:31:87.25:1229,87,0	0/0:34,0:34:90.26:0,90,1093	1/1:0,8:8:24.08:346,24,0
chr10	78228474	.	GGTCAATGGGGGCAGGCCTTGAGTGGAGGAAGAAC	G	3988.75	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.910;DP=743;FS=7.261;HRun=0;HaplotypeScore=598.2276;InbreedingCoeff=0.9837;MQ=80.14;MQ0=0;MQRankSum=-2.263;QD=46.38;ReadPosRankSum=-0.600;VQSLOD=-0.7221;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,7834	0/0:11,0:11:30.07:0,30,1434	0/0:20,0:19:54.07:0,54,1657	0/0:27,0:27:72.66:0,73,2544	0/0:30,0:30:87.28:0,87,5580	0/0:19,0:19:51.14:0,51,2934	0/0:34,0:34:99:0,99,5263	0/0:25,0:25:69.24:0,69,2903	0/0:30,0:30:90.31:0,90,7428	0/0:32,0:32:93.21:0,93,5188	0/0:18,0:18:51.17:0,51,2090	0/0:42,0:42:99:0,120,7318	0/0:41,0:41:99:0,114,7164	0/0:30,0:30:87.30:0,87,6243	0/0:36,0:36:99:0,108,6782	0/0:36,0:36:99:0,99,7888	0/0:33,0:33:93.28:0,93,5861	0/0:22,0:22:63.20:0,63,4201	1/1:1,18:19:54.17:1391,54,0	1/1:0,28:28:32.95:459,33,0	1/1:21,0:21:51.16:834,51,0	0/0:23,0:23:69.24:0,69,4004	0/0:14,0:14:36.12:0,36,1988	0/0:38,0:38:99:0,108,6674	0/0:17,0:17:51.17:0,51,3095	0/0:32,0:32:96.31:0,96,5877	1/1:18,0:18:54.13:1304,54,0	0/0:3,0:3:9.03:0,9,501
chr10	78230191	.	ATGTG	A	7518.17	PASS	AB=0.979;AC=41;AF=0.732;AN=56;BaseQRankSum=2.986;DP=765;FS=14.143;HRun=0;HaplotypeScore=205.7791;InbreedingCoeff=0.5413;MQ=55.75;MQ0=2;MQRankSum=-1.546;QD=12.39;ReadPosRankSum=1.133;VQSLOD=3.2550;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,1:57:99:0,111,2274	1/1:5,4:9:21.07:334,21,0	0/0:30,0:16:21.03:0,21,230	0/0:31,0:20:18.05:0,18,274	1/1:9,14:20:27.08:419,27,0	1/1:8,12:19:21.07:345,21,0	1/1:9,31:41:45.15:739,45,0	1/1:30,0:33:31.18:268,31,0	1/1:12,20:32:24.97:494,25,0	1/1:11,28:38:63.68:1006,64,0	1/1:2,12:14:12.04:197,12,0	0/1:36,0:36:31.88:32,0,42	1/1:34,0:34:7.83:52,8,0	1/1:7,34:43:44.18:844,44,0	1/1:19,41:60:34.14:647,34,0	1/1:4,35:39:54.12:848,54,0	1/1:10,16:26:14.22:428,14,0	0/1:13,0:13:26.69:40,0,27	1/1:9,0:14:11.94:105,12,0	1/1:8,0:13:2.97:20,3,0	1/1:11,0:25:0.47:1,0,0	0/1:16,0:16:0:0,0,0	0/1:9,0:9:0.38:0,0,0	0/0:34,0:33:5.55:0,6,41	1/1:6,20:26:21.07:345,21,0	0/1:23,1:23:11.53:196,0,12	1/1:9,0:14:17.99:158,18,0	0/0:5,0:5:2.68:0,3,11
chr10	78230200	.	TGTGTGTGTGTGTGTGTGA	T	2926.48	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=-5.014;DP=728;FS=10.490;HRun=0;HaplotypeScore=333.7379;InbreedingCoeff=0.7976;MQ=46.37;MQ0=4;MQRankSum=-1.750;QD=18.06;ReadPosRankSum=-1.120;VQSLOD=0.8755;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:62:99:0,147,9104	0/0:8,0:8:21.04:0,21,770	0/0:34,0:8:24.04:0,24,416	0/0:38,0:16:29.10:0,29,579	0/0:26,0:23:36.57:0,37,1579	0/0:17,0:16:21.07:0,21,992	0/0:42,0:42:54.04:0,54,2505	0/0:25,0:25:47.83:0,48,608	0/0:28,0:29:45.04:0,45,1550	0/0:43,0:42:91.50:0,91,3858	0/0:12,0:12:12.04:0,12,535	1/1:21,13:34:23.99:456,24,0	1/1:20,7:27:29.92:537,30,0	0/0:42,0:42:69.17:0,69,3087	0/0:58,0:58:45.52:0,46,1871	0/0:40,0:40:60.14:0,60,2678	0/0:27,0:27:34.93:0,35,1467	0/0:14,0:13:27.02:0,27,661	0/0:11,0:12:20.95:0,21,232	0/1:13,0:13:13.10:13,0,47	0/1:20,0:19:0:0,0,0	1/1:13,1:14:6.95:54,7,0	1/1:7,1:8:11.98:123,12,0	1/1:22,2:23:7.30:238,7,0	0/0:24,0:22:24.07:0,24,1065	1/1:16,6:21:59.95:1684,60,0	0/0:11,0:11:17.99:0,18,194	0/0:1,0:1:3.01:0,3,49
chr10	78230204	.	T	TGA	1330.70	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-3.650;DP=755;FS=3.592;HRun=0;HaplotypeScore=214.0630;InbreedingCoeff=0.7666;MQ=44.77;MQ0=7;MQRankSum=-0.369;QD=9.71;ReadPosRankSum=-2.393;VQSLOD=3.0352;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:63:99:0,147,1816	0/0:8,0:8:2.20:0,2,79	0/0:39,0:9:24.04:0,24,290	0/0:43,0:13:29.49:0,29,325	0/0:24,0:21:36.21:0,36,261	0/0:14,0:13:20.76:0,21,137	0/0:48,0:48:56.54:0,57,379	0/0:29,0:29:64.38:0,64,490	0/0:28,0:28:34.35:0,34,294	0/0:45,0:44:89.53:0,90,626	0/0:13,0:13:14.51:0,15,102	1/1:23,9:32:18.81:246,19,0	1/1:18,9:27:26.03:307,26,0	0/0:44,0:44:74.09:0,74,505	0/0:60,0:60:39.31:0,39,362	0/0:41,0:41:62.29:0,62,418	0/0:26,0:26:38.67:0,39,292	0/0:14,0:13:32.81:0,33,305	0/0:14,0:14:27.74:0,28,182	0/1:15,0:15:13.10:13,0,47	0/0:26,0:25:2.49:0,2,15	1/1:8,5:13:5.55:51,6,0	1/1:7,1:8:11.97:122,12,0	1/1:13,7:19:7.20:165,7,0	0/0:24,0:22:23.76:0,24,162	1/1:14,7:20:22.61:598,23,0	0/0:13,0:13:19.91:0,20,119	1/1:1,0:1:2.22:7,2,0
chr10	78230222	.	TGA	T	37.07	PASS	AB=0.981;AC=4;AF=0.071;AN=56;BaseQRankSum=3.893;DP=864;FS=0.000;HRun=0;HaplotypeScore=230.1123;InbreedingCoeff=0.1728;MQ=42.52;MQ0=19;MQRankSum=-2.666;QD=1.00;ReadPosRankSum=-1.124;VQSLOD=2.3318;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:57:99:0,133,2378	0/0:15,0:15:38.54:0,39,501	0/0:68,2:11:8.13:0,8,312	0/0:79,1:14:13.49:0,13,232	0/0:26,0:23:32.40:0,32,478	0/0:16,0:15:29.45:0,29,409	0/0:57,0:57:82.69:0,83,1347	0/0:21,0:20:31.18:0,31,755	0/0:27,0:27:41.59:0,42,587	0/0:48,0:48:99:0,112,1548	0/0:14,0:14:14.88:0,15,202	0/0:22,0:22:2.27:0,2,22	0/0:23,0:23:16.45:0,16,136	0/0:48,0:48:58.28:0,58,950	0/0:52,0:52:43.66:0,44,688	0/0:46,0:46:77.47:0,77,1062	0/0:28,0:28:56.60:0,57,768	0/1:11,0:10:44.88:45,0,181	0/0:19,0:18:34.74:0,35,541	0/0:18,0:18:2.09:0,2,7	0/0:27,0:26:2.91:0,3,58	0/0:20,5:25:2.15:0,2,48	0/0:8,1:9:2.99:0,3,24	0/0:33,0:33:11.11:0,11,68	0/0:34,0:33:30.09:0,30,479	0/1:24,1:24:53.12:53,0,270	0/0:9,0:9:15.01:0,15,149	1/1:0,1:1:3.01:40,3,0
chr10	78230241	.	GAC	G	67.99	PASS	AB=0.981;AC=6;AF=0.107;AN=56;BaseQRankSum=5.021;DP=959;FS=13.927;HRun=0;HaplotypeScore=249.1563;InbreedingCoeff=0.3249;MQ=41.72;MQ0=33;MQRankSum=-5.270;QD=0.79;ReadPosRankSum=-1.414;VQSLOD=1.0051;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,131,2316	0/0:16,0:16:41.72:0,42,713	0/0:107,0:13:31.05:0,31,507	0/0:114,0:21:47.20:0,47,550	0/0:26,1:27:32.85:0,33,594	0/0:16,0:16:24.54:0,25,399	0/0:54,1:55:90.49:0,90,1582	0/0:24,0:22:48.16:0,48,513	0/0:35,0:35:51.17:0,51,883	0/0:53,1:53:99:0,123,2322	0/0:13,1:14:11.55:0,12,214	1/1:29,0:28:6.22:18,6,0	0/1:26,0:26:9.75:13,0,10	0/0:46,0:46:81.21:0,81,1339	0/0:53,0:53:57.09:0,57,989	0/0:44,0:44:81.21:0,81,1410	0/0:30,0:30:72.19:0,72,1178	0/0:9,0:9:0.34:0,0,176	0/0:17,0:15:34.47:0,34,343	0/0:12,7:19:2.56:0,3,8	0/0:14,0:13:2.91:0,3,49	0/0:22,8:30:1.67:0,2,11	0/0:13,4:17:1.90:0,2,10	0/0:34,0:34:5.37:0,5,21	0/0:36,0:36:33.10:0,33,596	0/1:25,1:26:56.18:117,0,56	0/0:7,0:7:6.72:0,7,64	1/1:4,1:5:3.01:32,3,0
chr10	78230242	.	ACAGT	A	181.06	PASS	AB=0.981;AC=9;AF=0.161;AN=56;BaseQRankSum=5.751;DP=966;FS=9.714;HRun=0;HaplotypeScore=265.3865;InbreedingCoeff=0.4396;MQ=41.86;MQ0=34;MQRankSum=-5.294;QD=1.48;ReadPosRankSum=-3.780;VQSLOD=0.0541;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,135,3366	0/0:17,0:17:40.98:0,41,1139	0/0:106,0:13:36.08:0,36,745	0/0:116,0:21:48.49:0,48,879	0/0:27,0:27:31.66:0,32,891	0/0:16,0:16:24.06:0,24,544	0/0:54,0:54:90.52:0,91,2306	0/0:24,0:22:54.84:0,55,680	0/0:35,0:35:51.17:0,51,1375	0/0:57,0:56:99:0,112,3714	0/0:14,0:14:11.16:0,11,309	1/1:30,0:29:5.42:28,5,0	0/1:26,0:26:21.56:22,0,100	0/0:46,0:46:81.25:0,81,1994	0/0:51,0:51:57.17:0,57,1529	0/0:44,0:44:81.27:0,81,2020	0/0:31,0:31:75.25:0,75,1851	0/0:9,0:9:16.61:0,17,311	0/0:17,0:15:37.69:0,38,405	1/1:18,0:18:4.82:25,5,0	0/0:14,0:13:2.91:0,3,49	0/0:29,1:30:1.36:0,1,18	0/1:16,0:17:13.79:15,0,14	0/0:36,0:36:8.87:0,9,58	0/0:36,0:36:33.10:0,33,882	0/1:26,0:26:99:101,0,198	0/0:7,0:7:14.92:0,15,141	1/1:1,4:5:14.97:132,15,0
chr10	78230244	.	AGT	A	2412.94	PASS	AB=0.833;AC=21;AF=0.389;AN=54;BaseQRankSum=6.167;DP=988;FS=0.000;HRun=0;HaplotypeScore=257.3613;InbreedingCoeff=0.8879;MQ=41.60;MQ0=35;MQRankSum=-5.359;QD=9.81;ReadPosRankSum=-1.408;VQSLOD=2.8964;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,111,1776	0/0:19,0:19:47.82:0,48,763	0/0:105,0:14:20.71:0,21,360	0/0:117,0:21:34.05:0,34,486	0/0:28,0:28:30.05:0,30,499	0/0:15,0:15:15.52:0,16,250	0/0:56,0:56:78.25:0,78,1252	1/1:24,0:22:14.14:294,14,0	0/0:36,0:36:51.17:0,51,849	0/0:59,0:58:99:0,132,2228	0/0:14,0:14:8.54:0,9,151	1/1:1,29:29:11.72:153,12,0	1/1:0,26:26:36.05:437,36,0	0/0:46,0:46:66.22:0,66,1080	0/0:51,0:51:51.10:0,51,841	0/0:43,0:43:65.57:0,66,1032	0/0:30,0:30:66.17:0,66,1069	0/0:6,0:14:14.20:0,14,164	1/1:12,4:14:24.03:280,24,0	0/1:16,4:20:2.05:13,0,2	./.	1/1:14,20:34:5.48:64,5,0	1/1:7,12:19:8.79:115,9,0	1/1:5,31:36:9.02:116,9,0	0/0:42,0:42:31.64:0,32,499	1/1:8,19:27:74.58:912,75,0	1/1:3,6:9:12.26:130,12,0	1/1:5,0:5:14.76:106,15,0
chr10	78230253	.	GTGTC	G	76.77	PASS	AB=0.962;AC=8;AF=0.148;AN=54;BaseQRankSum=6.789;DP=1032;FS=18.081;HRun=0;HaplotypeScore=293.4047;InbreedingCoeff=0.1439;MQ=38.52;MQ0=41;MQRankSum=-6.049;QD=0.36;ReadPosRankSum=-2.914;VQSLOD=0.8667;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,120,2783	0/0:22,1:23:29.14:0,29,1138	0/0:102,0:12:4.86:0,5,229	0/1:112,0:17:12.97:13,0,586	0/0:30,2:32:23.08:0,23,695	0/0:19,0:19:14.98:0,15,372	0/0:57,0:56:90.49:0,90,1890	0/0:21,0:16:3.71:0,4,49	0/0:37,0:37:54.17:0,54,1296	0/0:60,1:59:84.91:0,85,3251	0/0:17,0:17:11.11:0,11,261	0/0:35,0:34:23.66:0,24,188	0/0:30,0:30:37.96:0,38,263	0/0:44,0:44:67.06:0,67,1439	0/0:51,0:51:54.14:0,54,1288	0/0:43,0:42:62.52:0,63,1439	0/0:32,0:32:75.14:0,75,1728	0/1:16,0:16:3.42:3,0,379	0/1:12,0:11:8.64:25,0,9	1/1:15,7:22:5.84:58,6,0	./.	0/0:33,8:41:4.14:0,4,51	0/0:21,4:25:8.47:0,8,58	0/0:37,0:37:8.85:0,9,56	0/0:43,1:44:22.90:0,23,645	0/1:29,3:32:58.60:59,0,433	0/1:10,0:10:1.66:21,0,2	0/1:5,1:6:25.03:25,0,138
chr10	78230265	.	GTC	G	71.91	PASS	AB=0.998;AC=10;AF=0.185;AN=54;BaseQRankSum=7.915;DP=1068;FS=21.171;HRun=0;HaplotypeScore=293.0314;InbreedingCoeff=0.3558;MQ=39.57;MQ0=36;MQRankSum=-5.774;QD=0.26;ReadPosRankSum=-1.477;VQSLOD=1.1645;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,105,1816	0/0:27,0:27:50.51:0,51,821	0/1:92,0:6:12.23:12,0,70	0/1:98,0:19:7.90:8,0,336	0/0:34,0:34:23.71:0,24,378	0/0:23,0:23:19.42:0,19,309	0/0:60,0:59:80.98:0,81,1432	0/1:24,0:15:22.50:61,0,22	0/0:40,0:40:60.81:0,61,886	0/0:62,0:57:80.87:0,81,2237	0/0:14,2:16:11.55:0,12,227	0/0:40,0:39:23.50:0,24,272	0/0:35,0:35:39.42:0,39,265	0/0:45,0:45:57.78:0,58,844	0/0:52,0:52:51.06:0,51,883	0/0:50,0:49:49.56:0,50,849	0/0:29,0:29:76.03:0,76,1327	0/1:15,0:15:18.70:19,0,324	1/1:7,0:6:5.46:29,5,0	1/1:28,0:27:2.89:36,3,0	./.	0/0:54,0:53:4.67:0,5,72	0/0:30,0:30:11.89:0,12,136	0/0:34,0:34:8.99:0,9,81	0/0:43,1:44:31.20:0,31,528	0/0:41,0:40:89.61:0,90,1012	1/1:13,1:14:8.42:46,8,0	0/0:7,0:7:6.46:0,6,231
chr10	78230277	.	G	GTA	36.41	PASS	AB=0.976;AC=6;AF=0.111;AN=54;BaseQRankSum=8.391;DP=1056;FS=20.294;HRun=0;HaplotypeScore=309.2502;InbreedingCoeff=0.1902;MQ=39.94;MQ0=33;MQRankSum=-6.862;QD=0.28;ReadPosRankSum=-5.470;VQSLOD=0.0717;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,1:50:96.03:0,96,1459	0/0:27,1:28:23.65:0,24,643	0/0:71,0:7:11.13:0,11,150	0/0:84,0:19:28.97:0,29,319	0/1:33,4:35:15.21:15,0,180	0/0:26,0:25:18.82:0,19,293	0/0:52,0:51:77.27:0,77,1237	0/1:25,0:16:10.56:11,0,47	0/0:41,0:41:50.69:0,51,771	0/0:69,1:66:53.85:0,54,2046	0/0:18,1:19:11.49:0,11,194	0/0:39,0:38:22.49:0,22,356	0/0:39,0:39:47.89:0,48,644	0/0:43,0:43:36:0,36,664	0/0:54,0:54:44.64:0,45,708	0/0:46,0:45:41.39:0,41,650	0/0:29,0:29:79.07:0,79,1219	0/0:15,0:15:35.32:0,35,382	0/1:4,0:3:0.71:1,0,20	1/1:22,9:30:9.30:112,9,0	./.	0/0:58,0:57:3.58:0,4,112	0/1:34,0:34:0.23:0,0,176	0/0:36,0:36:8.64:0,9,146	0/0:41,1:43:1.40:0,1,429	0/0:46,0:45:99:0,123,1607	0/0:14,0:15:0.81:0,1,68	0/0:9,0:9:20.95:0,21,282
chr10	78230330	.	A	AGT	3571.11	PASS	AB=0.986;AC=28;AF=0.519;AN=54;BaseQRankSum=0.955;DP=982;FS=15.490;HRun=0;HaplotypeScore=318.2635;InbreedingCoeff=-0.3031;MQ=32.93;MQ0=17;MQRankSum=-2.063;QD=4.66;ReadPosRankSum=-1.021;VQSLOD=0.8930;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:30.38:0,30,386	0/1:20,0:20:4.66:96,0,5	0/0:38,0:14:30.07:0,30,352	0/0:39,1:7:14.88:0,15,165	1/1:37,0:33:0.79:2,1,0	0/0:25,0:24:2.53:0,3,29	0/1:41,0:41:93.14:93,0,164	0/1:39,4:35:99:317,0,437	0/1:37,0:37:99:143,0,122	0/1:89,0:86:99:802,0,1126	1/1:26,0:26:0.32:2,0,0	1/1:35,0:35:4.09:191,4,0	0/1:38,0:38:46.73:199,0,47	0/1:47,0:47:20.22:110,0,20	0/0:61,0:61:7.96:0,8,85	0/1:46,0:43:16.12:16,0,178	0/1:21,0:21:85.88:202,0,86	0/1:13,0:13:18.79:181,0,19	0/1:16,0:7:59.98:109,0,60	0/1:38,2:38:28.63:68,0,29	0/1:19,0:16:38.01:38,0,49	1/1:41,0:40:7.70:83,8,0	1/1:30,3:33:12.61:157,13,0	./.	1/1:53,0:52:4.57:61,5,0	0/1:38,0:37:99:412,0,226	0/1:24,1:24:99:149,0,309	0/1:8,0:8:10.52:141,0,11
chr10	78230334	.	T	TGA	5963.29	PASS	AB=0.754;AC=30;AF=0.556;AN=54;BaseQRankSum=-2.541;DP=987;FS=29.116;HRun=0;HaplotypeScore=314.4578;InbreedingCoeff=-0.4218;MQ=31.97;MQ0=21;MQRankSum=0.161;QD=7.02;ReadPosRankSum=-4.091;VQSLOD=2.3684;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:37.73:0,38,525	0/1:14,5:19:6.08:187,0,6	0/0:42,0:15:39.06:0,39,515	0/0:42,0:7:14.41:0,14,191	1/1:31,4:32:0.06:2,0,0	0/1:13,13:25:4.76:5,0,39	0/1:27,14:41:99:196,0,199	0/1:32,10:34:99:499,0,569	0/1:24,15:40:99:270,0,197	0/1:66,25:88:99:1348,0,1461	1/1:20,5:25:0.38:2,0,0	1/1:19,15:35:1.19:342,1,0	0/1:20,17:37:73.98:340,0,74	0/1:30,16:46:22.46:222,0,22	0/1:38,23:61:17.02:17,0,64	0/1:26,20:43:58.63:59,0,225	0/1:12,8:20:99:373,0,140	0/1:9,4:13:66.93:356,0,67	0/1:15,3:8:99:192,0,121	0/1:31,9:38:35:70,0,35	0/1:18,3:16:20.05:20,0,77	1/1:32,11:42:7.94:119,8,0	1/1:15,14:29:13.18:228,13,0	./.	1/1:38,16:53:3.65:95,4,0	0/1:24,11:34:99:600,0,337	0/1:19,6:24:99:211,0,372	0/1:3,5:8:21.87:211,0,22
chr10	78230338	.	TGA	T	100.31	PASS	AB=0.977;AC=15;AF=0.278;AN=54;BaseQRankSum=5.584;DP=956;FS=10.402;HRun=0;HaplotypeScore=312.6926;InbreedingCoeff=-0.1719;MQ=31.49;MQ0=21;MQRankSum=-3.259;QD=0.22;ReadPosRankSum=-0.689;VQSLOD=1.0208;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:21.83:0,22,563	0/1:18,1:19:15.39:27,0,15	0/0:44,0:14:39.08:0,39,617	0/0:38,0:7:17.91:0,18,243	1/1:35,0:32:0.88:6,1,0	0/1:26,0:25:0.66:1,0,1	0/0:39,0:39:0.71:0,1,304	0/0:40,0:31:61.10:0,61,1000	0/0:40,0:40:8.51:0,9,208	0/1:91,1:89:41.51:42,0,2303	0/0:25,0:25:0.94:0,1,2	0/1:34,0:34:14.82:15,0,55	0/1:33,1:34:18.23:18,0,109	0/0:44,0:44:7.91:0,8,65	0/0:59,0:59:4.15:0,4,61	0/0:46,0:43:19.10:0,19,268	0/1:18,0:18:11.37:11,0,184	0/1:13,0:13:30.29:30,0,58	0/1:17,0:8:11.09:11,0,181	0/1:35,0:34:9.10:9,0,90	0/0:20,0:16:9.03:0,9,148	0/1:41,0:41:13.43:13,0,14	0/0:27,0:27:0.36:0,0,13	./.	0/1:43,12:54:12.91:14,0,13	0/1:33,1:33:3.93:4,0,643	0/0:24,0:23:12.80:0,13,573	0/1:8,0:8:1.49:33,0,1
chr10	78230339	.	GAGTA	G	1175.96	PASS	AB=0.996;AC=22;AF=0.407;AN=54;BaseQRankSum=3.299;DP=935;FS=8.654;HRun=0;HaplotypeScore=310.3559;InbreedingCoeff=0.0059;MQ=31.18;MQ0=20;MQRankSum=-0.896;QD=2.13;ReadPosRankSum=-1.885;VQSLOD=0.2103;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:15.90:0,16,711	1/1:18,1:19:15.07:98,15,0	0/0:42,1:14:39.05:0,39,922	0/0:39,0:7:18.06:0,18,394	0/1:35,0:32:0.96:1,0,1	0/1:26,0:25:0.35:0,0,1	0/1:39,1:40:67.10:67,0,395	0/0:38,0:29:45.61:0,46,1304	0/1:40,0:40:34.67:35,0,262	0/1:87,2:86:99:209,0,2772	0/0:24,0:24:2.23:0,2,5	0/1:32,0:32:15.30:53,0,15	0/1:33,0:33:18.65:143,0,19	0/0:43,0:43:0.27:0,0,85	0/0:58,0:58:2.71:0,3,89	0/0:46,0:43:0.71:0,1,383	0/1:18,0:18:79.20:79,0,227	0/1:11,0:11:63.49:89,0,63	0/1:16,0:8:31.72:32,0,258	0/1:34,0:33:22.59:23,0,147	0/0:20,0:16:9.03:0,9,228	1/1:38,0:38:4.04:39,4,0	1/1:25,0:25:9.16:65,9,0	./.	1/1:55,0:54:4.45:32,4,0	0/1:34,0:33:99:210,0,483	0/0:24,0:23:15.14:0,15,848	1/1:7,0:8:17.74:159,18,0
chr10	78230341	.	GTA	G	536.04	PASS	AB=0.972;AC=23;AF=0.426;AN=54;BaseQRankSum=5.325;DP=902;FS=7.497;HRun=0;HaplotypeScore=292.1559;InbreedingCoeff=0.0011;MQ=30.53;MQ0=20;MQRankSum=-4.240;QD=0.97;ReadPosRankSum=-2.583;VQSLOD=0.4651;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:21.11:0,21,413	1/1:18,0:18:7.18:38,7,0	0/0:43,0:14:36.04:0,36,580	0/0:37,0:7:18.04:0,18,306	0/0:35,0:32:0:0,0,2	1/1:25,0:24:0.29:3,0,0	0/1:37,0:37:3.87:4,0,281	0/0:37,0:29:33.90:0,34,846	0/0:40,0:40:12.97:0,13,229	0/1:86,1:84:96.26:96,0,1900	0/0:23,1:24:0.88:0,1,2	0/1:28,1:29:19.35:19,0,32	0/1:28,4:32:52.79:96,0,53	0/1:43,0:43:28.97:29,0,47	0/1:57,0:57:10.05:10,0,53	0/0:46,0:43:11.92:0,12,284	0/1:14,0:14:9.34:9,0,157	0/1:9,0:9:29.72:30,0,61	0/1:16,0:7:14.79:15,0,176	0/1:34,0:33:10.97:11,0,104	0/0:18,0:15:9.03:0,9,154	1/1:33,4:37:3.16:19,3,0	1/1:21,2:23:3.43:11,3,0	./.	1/1:49,4:52:0.64:16,1,0	0/1:27,6:32:99:223,0,431	0/0:23,0:23:13.41:0,13,569	1/1:6,2:8:12.13:61,12,0
chr10	78230346	.	T	TAA	31.88	PASS	AB=0.977;AC=9;AF=0.167;AN=54;BaseQRankSum=5.059;DP=877;FS=13.198;HRun=0;HaplotypeScore=298.7806;InbreedingCoeff=0.0901;MQ=28.85;MQ0=22;MQRankSum=-2.535;QD=0.12;ReadPosRankSum=-5.020;VQSLOD=0.1831;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:22.83:0,23,352	0/1:18,0:18:24.84:25,0,61	0/0:41,0:12:30.10:0,30,482	0/0:35,0:6:15.05:0,15,245	1/1:33,0:30:3.95:34,4,0	0/1:22,1:22:28.29:28,0,40	0/1:37,0:37:25.50:25,0,267	0/0:37,0:28:69.23:0,69,1047	0/0:38,0:38:15.83:0,16,234	0/1:84,3:82:8.38:8,0,2818	1/1:23,0:23:0.54:2,1,0	0/0:32,0:32:6.93:0,7,115	0/0:34,0:34:38.83:0,39,482	0/0:43,0:43:5.05:0,5,88	0/0:59,0:59:0.99:0,1,69	0/0:46,0:43:20.87:0,21,313	0/0:13,0:13:8.25:0,8,145	0/0:7,0:7:15.46:0,15,189	0/0:16,0:9:24.08:0,24,347	0/0:31,0:30:6.02:0,6,96	0/0:17,0:13:12.04:0,12,171	0/0:34,0:34:3.18:0,3,36	0/0:20,0:20:1.67:0,2,16	./.	0/1:47,2:48:6.88:31,0,7	0/0:31,0:30:80.47:0,80,968	0/0:23,0:23:43.61:0,44,636	0/0:9,0:9:19.72:0,20,182
chr10	78230347	.	GTGTATA	G	437.96	PASS	AB=0.963;AC=20;AF=0.370;AN=54;BaseQRankSum=3.031;DP=877;FS=6.279;HRun=0;HaplotypeScore=296.6700;InbreedingCoeff=0.1001;MQ=28.83;MQ0=23;MQRankSum=-2.833;QD=0.96;ReadPosRankSum=-1.879;VQSLOD=1.6151;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:6.80:7,0,495	1/1:18,0:18:6.45:50,6,0	0/0:41,0:12:32.90:0,33,738	0/0:34,0:5:15.05:0,15,410	1/1:33,0:30:0.80:23,1,0	1/1:24,0:23:1.36:28,1,0	0/0:38,0:38:3.95:0,4,471	0/0:38,0:29:44.91:0,45,1089	0/1:38,0:38:23.97:24,0,343	0/0:87,0:82:70.09:0,70,3690	0/0:23,0:23:2.77:0,3,6	0/1:25,6:31:41.38:41,0,42	0/1:31,3:34:17.08:68,0,17	0/0:43,0:43:6.79:0,7,125	0/1:58,0:58:6.27:6,0,109	0/1:46,0:43:0.78:1,0,431	0/0:13,0:13:5.43:0,5,271	0/1:7,0:7:30.37:30,0,134	0/0:16,0:9:17.52:0,18,442	0/0:31,0:30:11.71:0,12,175	0/0:17,0:13:12.04:0,12,267	0/1:29,5:34:7.14:12,0,7	1/1:16,3:19:0.59:18,1,0	./.	0/1:50,0:49:1.50:22,0,1	0/1:31,0:30:99:136,0,531	0/0:23,0:23:42.66:0,43,965	1/1:9,0:9:16.24:125,16,0
chr10	78230349	.	GTATA	G	742.29	PASS	AB=0.984;AC=23;AF=0.426;AN=54;BaseQRankSum=4.093;DP=858;FS=0.000;HRun=0;HaplotypeScore=281.9929;InbreedingCoeff=0.0495;MQ=28.83;MQ0=24;MQRankSum=-3.603;QD=1.29;ReadPosRankSum=-1.133;VQSLOD=2.0260;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:24:11.53:12,0,386	1/1:17,0:17:6.23:48,6,0	0/0:39,0:11:32.90:0,33,627	0/0:32,0:5:15.05:0,15,374	1/1:33,0:30:1.01:27,1,0	1/1:24,0:23:1.35:29,1,0	0/0:38,0:38:3.62:0,4,383	0/0:37,0:28:45.42:0,45,985	0/1:36,0:36:24.63:25,0,312	0/1:86,0:81:12.22:12,0,2718	0/0:22,0:23:1.41:0,1,4	0/1:28,0:28:0.81:1,0,28	0/1:33,0:33:9.86:89,0,10	0/1:42,0:42:5.04:5,0,94	0/1:58,0:58:9.56:10,0,82	0/1:46,0:43:5.93:6,0,361	0/0:13,0:13:2.31:0,2,224	0/1:7,0:7:32.40:32,0,90	0/0:16,0:8:21.05:0,21,424	0/0:31,0:30:11.30:0,11,162	0/0:15,0:11:12.03:0,12,243	1/1:34,0:34:1.87:29,2,0	1/1:19,0:19:0.97:19,1,0	./.	0/1:50,0:50:0.82:23,0,1	0/1:26,4:29:99:374,0,414	0/0:23,0:23:42.11:0,42,784	1/1:9,0:9:20.73:155,21,0
chr10	78230353	.	A	AGAG	90.56	PASS	AB=0.984;AC=9;AF=0.167;AN=54;BaseQRankSum=4.637;DP=812;FS=1.257;HRun=0;HaplotypeScore=267.7305;InbreedingCoeff=-0.0103;MQ=28.70;MQ0=25;MQRankSum=-3.567;QD=0.34;ReadPosRankSum=-3.162;VQSLOD=1.8413;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:18.70:0,19,353	0/0:15,0:15:7.46:0,7,60	0/0:39,0:10:30.10:0,30,545	0/0:29,0:5:15.05:0,15,274	0/0:31,0:28:1.60:0,2,5	0/1:22,0:21:7.79:8,0,48	0/0:36,0:36:18.17:0,18,283	0/0:31,0:22:51.17:0,51,880	0/1:34,0:34:61.70:62,0,268	0/0:80,1:77:99:0,101,2825	1/1:23,0:23:0.62:1,1,0	0/1:29,0:29:20.46:20,0,93	0/0:31,0:31:9.60:0,10,367	0/1:41,0:41:30.26:30,0,95	0/1:57,0:57:4.60:5,0,49	0/0:44,0:42:10.78:0,11,336	0/0:10,2:12:16.95:0,17,290	0/1:7,1:8:76.89:77,0,164	0/0:14,0:6:18.06:0,18,334	0/0:28,2:29:2.49:0,2,106	0/0:15,0:11:12.04:0,12,195	0/0:28,2:31:1.93:0,2,17	0/0:18,1:19:2.29:0,2,18	./.	0/1:49,0:48:0.11:1,0,0	0/0:30,0:29:80.88:0,81,981	0/0:20,0:20:45.13:0,45,728	0/0:4,0:4:8.92:0,9,87
chr10	78230362	.	T	TGA	336.42	PASS	AB=0.945;AC=16;AF=0.296;AN=54;BaseQRankSum=3.815;DP=744;FS=23.135;HRun=0;HaplotypeScore=222.5468;InbreedingCoeff=0.0885;MQ=28.67;MQ0=23;MQRankSum=-2.748;QD=0.95;ReadPosRankSum=-3.941;VQSLOD=0.4846;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:12.06:0,12,135	0/0:13,0:13:0.77:0,1,2	0/0:30,0:6:17.95:0,18,160	0/0:24,0:4:11.12:0,11,87	1/1:34,0:31:1.41:3,1,0	0/0:22,0:21:3.14:0,3,19	0/0:33,0:33:16.19:0,16,124	0/0:18,0:10:9.43:0,9,71	0/1:34,1:35:4.77:5,0,116	0/1:75,1:71:99:244,0,1327	0/0:22,1:23:4.74:0,5,26	0/1:25,4:29:0.72:47,0,1	0/1:27,2:29:15.29:15,0,90	0/0:34,1:35:2.73:0,3,74	0/0:48,6:54:7.93:0,8,78	0/0:35,3:36:11.55:0,12,159	0/1:11,1:12:8.86:9,0,66	0/0:8,0:8:15.39:0,15,146	0/0:14,0:6:16.66:0,17,107	0/0:28,0:27:2.26:0,2,33	0/0:13,0:9:5.89:0,6,40	1/1:28,1:29:2.36:4,2,0	1/1:16,2:18:0.94:2,1,0	./.	0/1:44,0:43:0.39:0,0,6	0/1:24,1:24:39.18:39,0,333	0/1:16,2:18:75.92:76,0,142	1/1:4,0:4:2.96:19,3,0
chr10	78230364	.	AGT	A	208.92	PASS	AB=0.931;AC=12;AF=0.222;AN=54;BaseQRankSum=-0.312;DP=721;FS=3.319;HRun=0;HaplotypeScore=205.4987;InbreedingCoeff=0.3835;MQ=28.67;MQ0=22;MQRankSum=-1.928;QD=1.32;ReadPosRankSum=0.930;VQSLOD=2.8260;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:6.02:0,6,88	0/1:13,0:13:0.33:0,0,1	0/0:29,0:6:11.98:0,12,128	0/0:22,0:4:3.01:0,3,48	0/0:35,0:32:3.01:0,3,40	0/1:22,0:21:8.76:9,0,30	0/0:33,0:33:7.45:0,7,35	1/1:13,3:9:7.57:81,8,0	0/0:35,0:35:11.03:0,11,104	0/0:75,0:70:99:0,107,1890	0/0:22,0:22:6.07:0,6,28	0/0:25,0:28:0.93:0,1,2	0/0:28,0:29:6.42:0,6,87	0/0:34,0:34:9.48:0,9,55	0/0:49,0:49:11.75:0,12,85	0/0:40,0:37:11.16:0,11,141	0/0:12,0:12:9.03:0,9,121	0/0:8,0:8:15:0,15,177	1/1:11,2:6:8.99:95,9,0	1/1:18,7:24:2.94:35,3,0	0/0:8,3:7:0:0,0,0	0/1:27,0:29:0.07:1,0,0	0/1:16,0:18:0.04:0,0,0	./.	0/0:43,0:42:3.07:0,3,12	0/0:20,0:21:12.27:0,12,271	0/1:12,6:18:90.71:110,0,91	0/1:4,0:4:0:0,0,0
chr10	78231756	.	T	TGA	2918.27	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=1.562;DP=1185;FS=9.385;HRun=0;HaplotypeScore=372.2806;InbreedingCoeff=0.6474;MQ=41.79;MQ0=16;MQRankSum=0.177;QD=9.18;ReadPosRankSum=1.367;VQSLOD=2.3823;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:91.50:0,92,1239	0/0:18,2:21:26.98:0,27,282	0/0:37,0:10:10.82:0,11,188	0/0:39,0:11:18.50:0,18,195	0/0:48,3:49:38.24:0,38,506	0/0:29,0:29:56.91:0,57,764	0/0:49,0:49:56.38:0,56,691	0/0:56,0:40:91.21:0,91,887	0/0:46,0:46:46.81:0,47,616	0/0:52,1:50:11.83:0,12,1148	0/0:36,2:38:36.11:0,36,496	1/1:57,0:56:5.94:454,6,0	0/1:45,0:45:24:684,0,24	0/0:41,0:41:33.88:0,34,432	0/0:55,0:55:62.64:0,63,835	0/0:49,0:49:73.66:0,74,933	0/0:43,0:41:99:0,111,1378	0/1:21,0:21:20.44:282,0,20	0/0:18,0:14:38.92:0,39,476	0/0:63,0:62:96.52:0,97,1334	0/0:42,0:42:68.96:0,69,902	1/1:63,0:63:26.84:229,27,0	1/1:44,0:44:8.05:263,8,0	1/1:50,0:49:49.74:753,50,0	0/0:48,4:52:49.51:0,50,668	0/1:21,0:20:99:200,0,136	0/0:28,0:28:44.03:0,44,583	1/1:12,0:12:24.01:229,24,0
chr10	78231758	.	A	AGT	6243.54	PASS	AB=0.929;AC=17;AF=0.304;AN=56;BaseQRankSum=-4.179;DP=1158;FS=0.369;HRun=0;HaplotypeScore=348.6646;InbreedingCoeff=0.8155;MQ=42.13;MQ0=18;MQRankSum=-0.248;QD=15.89;ReadPosRankSum=0.272;VQSLOD=3.6546;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:93.22:0,93,1156	0/0:21,0:21:13.94:0,14,199	0/1:37,0:9:4.54:5,0,168	0/1:38,0:10:2.05:2,0,205	0/0:48,0:46:35.96:0,36,458	0/0:30,0:29:54.65:0,55,694	0/0:46,0:46:50.41:0,50,604	0/0:52,0:36:54.53:0,55,775	0/0:44,0:44:44.71:0,45,559	0/0:51,0:47:48.56:0,49,1024	0/0:35,0:35:44.91:0,45,527	1/1:18,36:53:56.90:933,57,0	1/1:15,30:45:37.19:1267,37,0	0/0:42,0:42:33.72:0,34,407	0/0:53,0:53:59.77:0,60,771	0/0:47,0:47:57.45:0,57,800	0/0:41,0:40:99:0,105,1333	1/1:10,11:21:47.75:695,48,0	0/0:19,0:14:33.10:0,33,413	0/0:60,0:59:81.77:0,82,1211	0/0:44,0:44:72.04:0,72,900	1/1:50,16:63:26.99:444,27,0	1/1:31,13:44:13.48:504,13,0	1/1:11,41:51:60.20:1525,60,0	0/0:52,0:51:59.72:0,60,701	0/1:16,6:20:3.95:470,0,4	0/0:28,0:28:36.88:0,37,514	1/1:1,11:12:24.08:399,24,0
chr10	78231782	.	A	AGT	5230.73	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-3.671;DP=1092;FS=2.184;HRun=0;HaplotypeScore=304.3992;InbreedingCoeff=0.8817;MQ=45.58;MQ0=25;MQRankSum=0.430;QD=19.96;ReadPosRankSum=-1.082;VQSLOD=4.5213;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:58:90.05:0,90,1041	0/1:12,0:12:5.55:6,0,162	0/0:40,0:19:13.58:0,14,331	0/0:41,0:25:15.92:0,16,429	0/0:34,0:32:38.93:0,39,451	1/1:13,18:30:45.61:704,46,0	1/1:17,22:39:7.89:595,8,0	0/0:60,0:48:99:0,105,1227	1/1:15,22:34:36.10:538,36,0	0/0:40,0:37:72.02:0,72,844	0/0:28,0:28:35.96:0,36,428	0/0:46,0:45:51.05:0,51,593	0/0:44,0:43:92.29:0,92,1119	0/0:36,0:36:29.38:0,29,366	0/0:42,0:42:38.76:0,39,476	1/1:17,31:45:7.43:1086,7,0	1/1:26,20:44:93.23:1392,93,0	0/0:27,0:26:52.26:0,52,655	0/0:19,0:15:36.08:0,36,424	0/0:49,0:49:99:0,99,1185	0/0:54,0:54:84.04:0,84,986	0/0:56,0:53:32.85:0,33,379	0/0:37,0:37:42.08:0,42,487	0/0:52,0:52:80.34:0,80,961	1/1:24,25:46:57.13:910,57,0	0/0:24,0:22:54.15:0,54,650	0/0:26,0:26:60.14:0,60,713	0/0:11,0:12:20.90:0,21,234
chr10	78232314	.	C	CACAG	1273.96	PASS	AB=0.977;AC=9;AF=0.167;AN=54;BaseQRankSum=2.579;DP=660;FS=1.038;HRun=0;HaplotypeScore=196.3735;InbreedingCoeff=0.2844;MQ=53.96;MQ0=15;MQRankSum=-4.843;QD=7.49;ReadPosRankSum=-3.096;VQSLOD=2.0463;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,101,1606	0/0:9,0:9:20.66:0,21,372	0/0:45,0:7:17.84:0,18,239	0/1:58,0:16:14.97:15,0,121	0/0:25,0:25:66.49:0,66,1139	0/0:23,0:23:54.13:0,54,939	0/0:25,0:25:48.08:0,48,842	1/1:2,27:29:80.40:1148,80,0	0/0:23,0:22:60.11:0,60,1055	0/0:22,0:22:41.13:0,41,975	0/0:19,0:19:48.14:0,48,902	0/0:25,0:25:39.85:0,40,284	0/0:21,0:21:31.84:0,32,243	0/0:15,0:15:16.68:0,17,370	0/0:29,0:28:63.64:0,64,1112	0/0:35,0:35:88.37:0,88,1411	0/0:20,0:18:47.88:0,48,813	1/1:7,0:7:2.99:23,3,0	0/1:13,0:13:13.63:71,0,14	0/1:28,0:28:64.01:64,0,141	0/1:15,0:15:4.24:4,0,37	0/0:22,0:22:41.03:0,41,324	0/0:15,0:15:26.03:0,26,237	0/0:32,0:32:45.36:0,45,462	0/0:23,0:23:56.77:0,57,1052	0/0:19,0:19:8.23:0,8,215	0/1:18,0:19:25.09:89,0,25	./.
chr10	78232319	.	AAAGAGC	A	5155.31	PASS	AB=1.000;AC=21;AF=0.389;AN=54;BaseQRankSum=-1.987;DP=621;FS=9.445;HRun=0;HaplotypeScore=185.4285;InbreedingCoeff=0.2810;MQ=53.75;MQ0=15;MQRankSum=-2.052;QD=15.12;ReadPosRankSum=-0.736;VQSLOD=3.3778;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:38.52:39,0,1225	0/0:9,0:9:24.03:0,24,331	0/0:39,0:7:12.58:0,13,131	0/1:53,0:16:1.73:2,0,104	0/0:22,0:22:58.93:0,59,1026	0/0:22,0:22:41.71:0,42,881	0/1:26,0:26:23.23:23,0,723	1/1:27,0:26:71.79:779,72,0	0/0:23,0:21:56.43:0,56,1095	0/0:21,0:21:55.88:0,56,1015	0/0:17,0:17:46.97:0,47,1039	0/1:24,0:24:40.35:442,0,40	0/1:21,0:21:40.32:447,0,40	0/0:15,0:15:27.98:0,28,368	0/0:28,0:27:58:0,58,875	0/0:31,0:31:83.90:0,84,1655	0/0:22,0:20:47.02:0,47,987	1/1:8,0:8:5.50:45,6,0	1/1:2,10:11:30.57:470,31,0	1/1:22,0:22:28.22:503,28,0	1/1:13,0:13:3.01:48,3,0	0/1:19,0:19:80.38:232,0,80	0/1:13,0:13:12.02:416,0,12	0/1:32,0:32:28.46:797,0,28	0/0:22,0:22:39.27:0,39,916	0/1:17,0:17:12.37:497,0,12	1/1:19,0:19:32.95:416,33,0	./.
chr10	78232323	.	AGC	A	3557.61	PASS	AB=1.000;AC=28;AF=0.519;AN=54;BaseQRankSum=6.301;DP=618;FS=29.871;HRun=0;HaplotypeScore=156.1538;InbreedingCoeff=0.6678;MQ=53.85;MQ0=15;MQRankSum=-1.503;QD=9.72;ReadPosRankSum=-4.439;VQSLOD=1.3376;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:99:172,0,347	0/0:8,0:8:17.08:0,17,104	0/0:35,0:6:11.41:0,11,90	0/1:50,0:16:8.11:8,0,94	0/0:23,0:23:45.66:0,46,344	0/0:21,0:21:16.67:0,17,329	0/1:26,0:26:11.99:12,0,279	1/1:27,0:26:72.70:512,73,0	0/1:23,0:21:11.17:11,0,414	0/0:23,0:23:37.22:0,37,405	0/0:18,0:18:22.94:0,23,421	1/1:22,0:22:34.72:316,35,0	1/1:19,0:19:20.55:267,21,0	0/0:15,0:15:12.71:0,13,158	0/0:25,0:24:44.30:0,44,355	0/0:30,0:30:38.20:0,38,664	0/0:22,0:20:35.95:0,36,415	1/1:2,7:8:6.02:79,6,0	1/1:12,0:11:29.86:235,30,0	1/1:22,0:22:35.53:305,36,0	1/1:12,0:12:3:26,3,0	1/1:22,0:22:30.29:280,30,0	1/1:16,0:16:28.66:226,29,0	1/1:33,0:33:48.86:452,49,0	0/0:19,4:23:17.97:0,18,333	1/1:17,0:17:16.41:210,16,0	1/1:21,0:21:52.11:447,52,0	./.
chr10	78232452	.	A	AC	6663.84	PASS	AB=0.524;AC=13;AF=0.232;AN=56;BaseQRankSum=-13.100;DP=673;FS=5.291;HRun=0;HaplotypeScore=64.3817;InbreedingCoeff=0.9057;MQ=86.00;MQ0=0;MQRankSum=-1.791;QD=42.99;ReadPosRankSum=2.891;VQSLOD=5.4962;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,101,1390	0/0:8,0:8:24.05:0,24,300	0/0:25,0:26:77.06:0,77,1028	0/0:21,0:21:60.20:0,60,829	0/0:19,0:19:57.17:0,57,777	0/0:22,0:22:60.17:0,60,803	0/0:25,0:25:69.21:0,69,940	0/0:36,0:36:99:0,108,1461	0/0:22,0:22:66.22:0,66,923	0/0:33,0:33:99:0,99,1384	0/0:32,0:32:90.30:0,90,1257	1/1:1,26:27:69.24:1098,69,0	1/1:0,19:19:57.19:909,57,0	0/0:26,0:26:69.22:0,69,948	0/0:36,0:36:99:0,102,1404	0/0:19,0:19:54.17:0,54,739	0/0:22,0:21:54.16:0,54,737	0/0:19,0:19:54.18:0,54,745	0/0:12,0:12:36.12:0,36,503	0/0:20,0:20:60.20:0,60,839	0/0:24,0:24:69.23:0,69,965	1/1:0,22:22:60.20:958,60,0	1/1:0,21:21:60.20:958,60,0	1/1:0,26:26:72.25:1148,72,0	0/0:26,0:26:72.24:0,72,1007	0/1:3,30:33:10.88:1307,0,11	0/0:36,0:36:99:0,105,1468	1/1:0,7:7:18.06:286,18,0
chr10	78234216	.	G	GC	2413.41	PASS	AC=16;AF=0.333;AN=48;BaseQRankSum=-7.243;DP=374;FS=2.591;HRun=0;HaplotypeScore=69.4751;InbreedingCoeff=0.9345;MQ=54.98;MQ0=0;MQRankSum=-5.079;QD=21.55;ReadPosRankSum=3.317;VQSLOD=5.3089;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:11:12.04:0,12,149	1/1:0,11:11:24.08:349,24,0	0/0:7,0:7:20.93:0,21,213	0/0:5,0:5:12:0,12,124	./.	0/0:20,0:20:42.13:0,42,500	0/0:14,0:14:21.05:0,21,243	0/0:20,0:20:60.19:0,60,771	0/0:11,0:11:18.06:0,18,219	1/1:0,24:24:66.20:926,66,0	./.	1/1:0,9:9:18.05:216,18,0	1/1:0,13:13:18.05:240,18,0	1/1:0,19:19:24.07:305,24,0	1/1:0,17:17:12.04:176,12,0	0/0:23,0:23:48.12:0,48,548	0/0:8,0:8:15.04:0,15,176	1/1:0,7:7:18.06:250,18,0	0/0:10,0:10:30.10:0,30,394	0/0:16,0:16:15.01:0,15,154	0/0:12,0:12:12.02:0,12,138	1/1:0,12:12:12.04:140,12,0	./.	./.	0/0:19,0:19:36.11:0,36,438	0/0:20,1:21:11.68:0,12,484	0/0:19,0:19:36.11:0,36,441	0/0:2,0:2:6.02:0,6,83
chr10	78234388	.	ATGGTAGTGGTGGTGG	A	1162.54	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=3.232;DP=493;FS=3.494;HRun=0;HaplotypeScore=183.4635;InbreedingCoeff=0.6991;MQ=47.87;MQ0=12;MQRankSum=-2.677;QD=27.68;ReadPosRankSum=-0.289;VQSLOD=2.7293;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:66.23:0,66,3148	0/0:2,0:2:6.02:0,6,169	0/0:43,0:7:18.06:0,18,385	0/0:50,0:16:7.76:0,8,654	0/0:17,0:17:25.33:0,25,1086	0/0:16,0:16:36.02:0,36,855	0/0:32,0:32:78.27:0,78,3124	0/0:21,0:19:51.17:0,51,1681	0/0:15,0:15:39.13:0,39,1495	0/0:20,0:20:42.10:0,42,1524	0/0:11,0:11:30.57:0,31,1279	1/1:5,0:5:6.02:150,6,0	1/1:5,1:6:11.83:262,12,0	0/0:21,0:21:54.06:0,54,2130	0/0:16,0:16:45.15:0,45,1628	0/0:17,0:17:45.11:0,45,1676	0/0:26,0:26:57.14:0,57,2091	0/0:6,0:6:1.88:0,2,20	0/0:9,0:7:21.05:0,21,686	0/0:8,0:8:18.05:0,18,716	0/0:52,0:49:99:0,107,5076	1/1:3,10:13:9.03:348,9,0	1/1:0,9:9:9.03:393,9,0	0/1:9,0:9:18.31:154,0,18	0/0:16,0:16:42.14:0,42,2064	0/0:11,0:11:33.10:0,33,1439	0/0:6,0:6:9.03:0,9,541	0/0:9,0:9:27.09:0,27,929
chr10	78234417	.	AGTGGTG	A	4439.97	PASS	AB=1.000;AC=29;AF=0.537;AN=54;BaseQRankSum=2.586;DP=440;FS=27.695;HRun=0;HaplotypeScore=102.3155;InbreedingCoeff=0.7997;MQ=38.01;MQ0=40;MQRankSum=-3.697;QD=22.65;ReadPosRankSum=-0.694;VQSLOD=2.6693;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:28:51.10:0,51,1436	1/1:1,3:3:6.02:126,6,0	0/0:44,0:5:9.03:0,9,141	0/0:48,0:9:12:0,12,178	1/1:10,9:19:2.91:195,3,0	1/1:6,3:8:9.03:190,9,0	1/1:11,9:20:30.07:566,30,0	1/1:16,10:17:13.08:338,13,0	1/1:6,4:10:15.05:291,15,0	1/1:7,6:13:21.06:386,21,0	1/1:4,5:9:11.71:177,12,0	0/0:3,0:3:9.03:0,9,258	0/1:4,0:3:9.05:9,0,59	1/1:10,3:13:11.99:187,12,0	1/1:4,5:9:15.05:294,15,0	1/1:5,6:11:24.08:511,24,0	1/1:13,6:19:16.39:351,16,0	0/0:8,0:8:22.41:0,22,370	0/0:14,0:7:18.06:0,18,546	0/0:8,0:7:8.95:0,9,184	0/0:46,0:39:72.19:0,72,2181	0/0:12,0:10:6.41:0,6,82	0/0:10,0:9:8.97:0,9,74	0/0:11,0:11:8.80:0,9,272	1/1:9,8:16:27.07:499,27,0	1/1:7,6:11:15.98:320,16,0	0/0:7,0:7:15.01:0,15,357	./.
chr10	78234441	.	GATT	G	1659.40	PASS	AB=0.987;AC=20;AF=0.370;AN=54;BaseQRankSum=7.712;DP=406;FS=13.217;HRun=0;HaplotypeScore=103.9961;InbreedingCoeff=-0.1360;MQ=38.26;MQ0=32;MQRankSum=-6.934;QD=7.94;ReadPosRankSum=3.667;VQSLOD=1.4562;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:42.05:0,42,727	0/1:7,0:6:5.30:52,0,5	0/0:37,0:6:7.01:0,7,104	0/0:40,0:1:3.01:0,3,41	0/1:17,0:17:15.23:155,0,15	0/1:11,0:10:13.71:153,0,14	0/1:19,0:19:44.72:135,0,45	0/1:14,0:10:4.66:5,0,124	1/1:7,0:7:14.43:214,14,0	0/1:19,0:18:99:107,0,176	1/1:10,0:10:9.13:98,9,0	0/0:4,0:4:9.03:0,9,117	0/1:2,0:2:20.99:39,0,21	0/1:17,0:17:47.84:48,0,153	0/1:11,0:11:47.25:71,0,47	0/1:10,0:10:39.62:213,0,40	0/1:18,0:17:29.08:176,0,29	0/1:9,1:10:74.79:75,0,109	0/0:17,0:11:30.75:0,31,421	0/0:7,0:6:17.39:0,17,270	0/0:44,1:41:76.87:0,77,1367	0/0:7,0:7:5.70:0,6,33	0/1:11,0:11:23.17:23,0,66	0/0:10,3:13:12.35:0,12,196	1/1:16,0:16:14.52:227,15,0	0/1:9,1:10:36.13:36,0,134	0/0:6,0:6:17.85:0,18,292	./.
chr10	78234456	.	G	GGTT	5782.86	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=3.806;DP=431;FS=23.583;HRun=0;HaplotypeScore=97.3350;InbreedingCoeff=0.7759;MQ=47.73;MQ0=22;MQRankSum=-2.558;QD=27.41;ReadPosRankSum=4.100;VQSLOD=2.6684;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:26.94:0,27,338	1/1:0,7:7:14.98:277,15,0	0/0:39,0:9:13.80:0,14,133	0/0:45,0:14:7.03:0,7,112	1/1:5,11:18:23.08:350,23,0	1/1:1,8:10:18.02:340,18,0	1/1:6,20:27:44.93:753,45,0	0/0:12,0:12:29.72:0,30,208	1/1:2,8:11:5.03:373,5,0	1/1:3,15:19:48.04:909,48,0	1/1:6,3:9:11.63:176,12,0	0/0:4,0:4:8.83:0,9,63	0/0:3,0:3:5.02:0,5,41	1/1:1,15:19:36.04:733,36,0	1/1:4,9:13:14.06:423,14,0	1/1:3,8:11:27.02:493,27,0	1/1:7,12:19:15.78:557,16,0	0/0:10,0:10:23.87:0,24,195	0/1:15,0:11:3:3,0,156	0/0:7,0:6:17.07:0,17,211	0/0:44,0:41:74.32:0,74,794	0/0:7,0:7:5.92:0,6,39	0/0:11,0:11:3.35:0,3,37	0/0:15,0:15:12.68:0,13,136	1/1:4,16:21:21:396,21,0	0/1:11,0:11:0.16:0,0,108	0/0:6,0:6:14.94:0,15,189	0/0:2,0:2:2.97:0,3,20
chr10	78234471	.	G	GGTT	6519.33	PASS	AB=0.958;AC=27;AF=0.482;AN=56;BaseQRankSum=1.322;DP=405;FS=1.074;HRun=0;HaplotypeScore=87.5444;InbreedingCoeff=0.7516;MQ=58.66;MQ0=9;MQRankSum=-3.216;QD=29.50;ReadPosRankSum=3.571;VQSLOD=4.9566;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:11:22.57:0,23,296	1/1:7,0:7:15.04:284,15,0	0/0:25,0:12:21.69:0,22,227	0/0:37,0:17:37.06:0,37,343	1/1:23,0:23:29.04:409,29,0	1/1:11,0:11:23.94:391,24,0	1/1:27,0:28:48.06:797,48,0	0/1:9,0:9:4:4,0,161	1/1:11,0:11:23.86:406,24,0	1/1:25,0:25:68.64:1075,69,0	1/1:4,7:11:23.71:283,24,0	0/0:9,0:9:26.88:0,27,210	0/0:5,0:5:10.41:0,10,90	1/1:21,0:21:44.94:798,45,0	1/1:14,0:14:29.90:483,30,0	1/1:11,0:11:27.07:504,27,0	1/1:18,0:18:33.40:612,33,0	0/1:6,0:7:24.82:25,0,94	0/0:12,0:11:24.11:0,24,239	0/0:13,0:13:33.02:0,33,351	0/0:31,0:30:50.61:0,51,591	0/1:10,0:10:11.14:11,0,62	0/0:5,0:5:3.48:0,3,38	0/0:16,0:16:20.84:0,21,155	1/1:15,0:15:26.94:438,27,0	0/0:12,0:12:27.84:0,28,243	0/0:5,0:5:15.02:0,15,201	0/0:1,0:1:2.98:0,3,21
chr10	78237466	.	C	CT	10690.36	PASS	AB=0.693;AC=38;AF=0.679;AN=56;BaseQRankSum=-13.335;DP=699;FS=0.000;HRun=10;HaplotypeScore=101.4629;InbreedingCoeff=0.6692;MQ=77.24;MQ0=0;MQRankSum=-1.602;QD=20.36;ReadPosRankSum=0.160;VQSLOD=4.7349;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,1:36:83.86:0,84,690	1/1:2,7:9:18.05:192,18,0	0/1:19,1:20:10.63:11,0,128	0/0:20,0:20:26.40:0,26,267	1/1:3,28:31:72.14:756,72,0	1/1:3,19:22:45.58:480,46,0	1/1:5,19:24:48.12:512,48,0	1/1:5,27:32:69.12:710,69,0	1/1:4,26:32:59.56:604,60,0	1/1:6,16:22:51.13:542,51,0	1/1:3,18:22:13.67:522,14,0	0/0:2,0:25:38.70:0,39,112	0/0:0,0:19:36.67:0,37,106	0/1:7,21:30:32.98:474,0,33	1/1:7,25:33:47.23:681,47,0	1/1:3,29:32:68.58:906,69,0	1/1:8,22:29:35.50:580,36,0	1/1:2,11:13:24.05:256,24,0	0/1:12,12:24:16.60:310,0,17	1/1:4,22:28:47.20:675,47,0	1/1:4,19:23:48.12:512,48,0	0/0:2,0:22:38.70:0,39,112	0/0:3,0:24:38.69:0,39,112	0/0:4,0:28:48.87:0,49,142	0/1:6,15:21:25.81:368,0,26	1/1:10,24:35:10.13:708,10,0	1/1:6,20:26:17.63:584,18,0	1/1:0,14:15:30.04:307,30,0
chr10	78238611	.	AC	A	1892.04	PASS	AB=0.900;AC=19;AF=0.339;AN=56;BaseQRankSum=4.113;DP=470;FS=0.479;HRun=10;HaplotypeScore=63.6013;InbreedingCoeff=0.6771;MQ=81.07;MQ0=0;MQRankSum=-0.395;QD=12.05;ReadPosRankSum=1.825;VQSLOD=3.2211;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:15.04:0,15,162	1/1:2,7:9:8.88:122,9,0	0/0:24,1:25:15.82:0,16,344	0/0:14,0:13:8.59:0,9,61	1/1:3,11:14:26.94:229,27,0	0/0:20,0:20:7.05:0,7,289	0/0:24,0:24:14.20:0,14,334	1/1:31,0:31:26.22:75,26,0	0/0:18,0:18:36.10:0,36,398	1/1:5,12:17:38.99:338,39,0	1/1:5,14:19:41.98:365,42,0	0/0:5,0:11:5.58:0,6,29	0/0:8,0:15:8.64:0,9,46	1/1:3,13:16:32.99:286,33,0	1/1:6,15:21:38.94:338,39,0	0/0:18,1:19:22.04:0,22,452	0/0:11,0:11:1.23:0,1,170	1/1:1,11:12:29.99:260,30,0	0/0:14,2:16:0.06:0,0,259	0/0:19,1:20:1.14:0,1,231	0/1:8,1:9:13.98:14,0,145	0/0:7,0:14:2.84:0,3,15	0/0:7,0:11:2.63:0,3,14	0/0:5,0:12:3.35:0,3,15	0/0:21,0:21:42.08:0,42,445	1/1:5,2:9:8.03:58,8,0	0/0:33,0:33:66.16:0,66,719	0/0:6,0:17:17.37:0,17,115
chr10	78238619	.	CCCA	C	597.16	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.182;DP=405;FS=15.702;HRun=0;HaplotypeScore=77.7116;InbreedingCoeff=0.7218;MQ=86.78;MQ0=0;MQRankSum=-1.613;QD=35.13;ReadPosRankSum=-1.936;VQSLOD=2.8624;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:24.03:0,24,414	0/0:8,0:8:17.68:0,18,207	0/0:27,0:27:60.96:0,61,955	0/0:16,0:15:8.94:0,9,293	0/0:13,0:13:32.61:0,33,300	0/0:15,0:15:45.10:0,45,785	0/0:18,0:18:54.10:0,54,956	1/1:2,15:17:43.83:692,44,0	0/0:14,0:14:42.12:0,42,889	0/0:15,0:15:45.11:0,45,498	0/0:16,0:16:45.09:0,45,456	0/0:10,0:10:17.88:0,18,200	0/0:12,0:12:12.02:0,12,198	0/0:13,0:13:33.07:0,33,339	0/0:22,0:22:54.10:0,54,555	0/0:23,0:23:69.15:0,69,1209	0/0:12,0:12:33.05:0,33,525	0/0:12,0:12:30.07:0,30,308	0/0:13,0:13:39.07:0,39,724	0/0:15,0:15:42.08:0,42,726	0/0:8,0:8:21.07:0,21,422	0/0:8,0:8:3.01:0,3,51	0/0:6,0:6:14.98:0,15,162	0/0:11,0:11:8.52:0,9,97	0/0:20,0:20:53.99:0,54,1031	0/0:8,0:8:20.46:0,20,165	0/0:28,0:28:84.22:0,84,1680	0/0:15,0:15:24.05:0,24,369
chr10	78240856	.	T	TAGC	3903.40	PASS	AB=0.925;AC=37;AF=0.661;AN=56;BaseQRankSum=-2.815;DP=636;FS=15.223;HRun=0;HaplotypeScore=123.1170;InbreedingCoeff=0.5328;MQ=70.78;MQ0=9;MQRankSum=-1.452;QD=8.60;ReadPosRankSum=1.103;VQSLOD=2.4706;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:26.90:0,27,218	1/1:13,0:13:13.80:119,14,0	0/0:26,0:16:18.02:0,18,172	0/0:42,0:29:29.86:0,30,270	1/1:14,0:14:3.47:26,3,0	1/1:14,0:14:8.99:86,9,0	1/1:39,0:37:30.85:242,31,0	0/0:28,0:27:26.93:0,27,219	1/1:12,3:27:1.96:50,2,0	0/1:21,0:21:7.44:106,0,7	0/1:14,0:14:0.03:0,0,0	0/1:16,23:40:6.96:111,0,7	1/1:32,0:32:59.31:942,59,0	0/1:35,0:35:42.68:190,0,43	1/1:35,0:35:1.03:205,1,0	1/1:21,0:21:11.99:113,12,0	1/1:29,0:29:6.01:69,6,0	0/0:25,0:25:57.52:0,58,678	1/1:10,0:10:3:28,3,0	1/1:6,0:6:3.01:51,3,0	1/1:16,0:16:12.41:140,12,0	1/1:12,0:12:5.99:49,6,0	1/1:10,0:10:3.01:39,3,0	1/1:21,0:20:44.73:596,45,0	0/1:13,0:13:0:0,0,0	0/0:17,0:17:26.95:0,27,238	1/1:32,0:32:68.35:740,68,0	0/0:15,0:16:29.94:0,30,251
chr10	78240872	.	AGC	A	287.75	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.271;DP=583;FS=1.839;HRun=0;HaplotypeScore=114.7238;InbreedingCoeff=0.7976;MQ=55.11;MQ0=22;MQRankSum=-2.910;QD=10.66;ReadPosRankSum=3.098;VQSLOD=3.3337;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,1:17:26.10:0,26,602	0/0:11,0:11:33.10:0,33,571	0/0:19,0:9:27.09:0,27,450	0/0:31,0:18:54.16:0,54,861	0/0:7,0:6:9.03:0,9,158	0/0:11,0:10:13.77:0,14,272	0/0:39,0:34:32.20:0,32,568	0/0:28,0:19:38.66:0,39,263	0/0:22,0:22:23.23:0,23,256	0/0:19,0:17:46.70:0,47,759	0/0:6,0:6:8.48:0,8,116	0/0:40,0:40:51.17:0,51,749	0/0:33,0:32:96.32:0,96,1556	0/0:41,0:41:96.19:0,96,1737	0/0:40,0:39:72.23:0,72,1389	0/0:21,0:21:11.94:0,12,233	0/0:28,0:28:16.21:0,16,242	0/0:27,0:27:78.26:0,78,1437	0/0:9,0:9:27.09:0,27,370	0/0:8,0:8:5.50:0,6,86	0/0:22,0:22:17.56:0,18,291	0/0:6,0:6:14.95:0,15,255	0/0:10,0:10:10.89:0,11,212	0/0:27,0:26:71.37:0,71,1196	0/0:8,0:5:8.99:0,9,157	1/1:13,2:13:12.30:206,12,0	0/0:26,0:26:69.23:0,69,1181	1/1:9,3:12:31.11:198,31,0
chr10	78240873	.	GCAGCAGCAA	G	1042.38	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.434;DP=579;FS=5.326;HRun=0;HaplotypeScore=166.2509;InbreedingCoeff=0.8127;MQ=54.94;MQ0=23;MQRankSum=0.085;QD=20.05;ReadPosRankSum=0.408;VQSLOD=2.2898;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:34.28:0,34,711	0/0:12,0:12:8.98:0,9,660	0/0:19,0:9:21.03:0,21,427	0/0:31,0:18:51.09:0,51,776	0/0:6,0:5:6.02:0,6,163	0/0:11,0:10:16.48:0,16,218	0/0:38,0:33:56.53:0,57,684	1/1:8,19:18:47.70:662,48,0	0/0:21,0:21:23.88:0,24,299	0/0:19,0:17:35.80:0,36,655	0/0:6,0:6:6.35:0,6,51	0/0:40,0:40:47.99:0,48,1197	0/0:33,0:32:96.04:0,96,2887	0/0:40,0:40:53.25:0,53,2079	0/0:40,0:39:57.18:0,57,1711	0/0:21,0:21:14.91:0,15,324	0/0:28,0:28:18.31:0,18,216	0/0:26,0:26:78.16:0,78,2325	0/0:9,0:9:13.74:0,14,156	0/0:9,0:9:3.01:0,3,102	0/0:22,0:22:15.88:0,16,313	0/0:6,0:6:16.24:0,16,198	0/0:10,0:10:13.35:0,13,270	0/0:28,0:27:72.66:0,73,2065	0/0:9,0:5:8.94:0,9,117	1/1:13,0:11:21.32:186,21,0	0/0:26,0:26:69.24:0,69,1935	1/1:12,0:12:32.60:335,33,0
chr10	78240879	.	G	GCAGCAGCAGCAGCAGCAA	2363.15	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=-1.548;DP=589;FS=4.400;HRun=0;HaplotypeScore=257.3675;InbreedingCoeff=0.4645;MQ=50.32;MQ0=28;MQRankSum=-5.110;QD=10.01;ReadPosRankSum=-5.180;VQSLOD=1.3511;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:30.30:0,30,736	0/0:10,0:10:27.02:0,27,772	0/0:15,0:7:18.06:0,18,469	0/0:23,0:12:30.07:0,30,672	0/1:6,0:4:18.98:19,0,114	1/1:12,0:9:7.81:52,8,0	1/1:41,0:36:47.27:833,47,0	0/0:27,0:17:32.96:0,33,773	1/1:15,0:15:17.39:306,17,0	0/0:15,0:12:19.73:0,20,418	0/1:4,0:3:0.21:0,0,0	0/0:39,0:39:50.17:0,50,534	0/0:39,0:38:70.39:0,70,1689	0/0:39,0:39:36.27:0,36,2470	0/0:43,0:42:53.30:0,53,1658	1/1:23,0:23:8.73:425,9,0	1/1:9,13:35:12:487,12,0	0/0:28,0:28:83.96:0,84,2585	1/1:8,0:8:0.24:20,0,0	1/1:3,0:7:2.89:47,3,0	0/1:21,0:21:42.99:43,0,47	0/1:4,0:4:18.11:19,0,18	0/0:11,0:11:3.43:0,3,92	0/0:34,0:33:67.65:0,68,1276	1/1:10,0:5:4.12:19,4,0	0/1:19,0:17:9.76:10,0,988	0/1:31,0:31:99:267,0,333	0/0:12,0:12:30.06:0,30,1012
chr10	78240897	.	ACAACAACAGCAG	A	1864.44	PASS	AB=0.937;AC=13;AF=0.232;AN=56;BaseQRankSum=6.342;DP=579;FS=2.519;HRun=0;HaplotypeScore=182.0000;InbreedingCoeff=0.1390;MQ=48.27;MQ0=36;MQRankSum=-4.353;QD=9.09;ReadPosRankSum=0.808;VQSLOD=2.6502;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:24.41:0,24,264	0/1:8,0:8:99:134,0,186	0/0:5,0:4:9.01:0,9,161	0/0:12,0:2:5.75:0,6,76	0/0:10,0:6:2.91:0,3,53	0/0:9,0:4:5.10:0,5,25	0/0:50,0:45:98.95:0,99,2033	1/1:26,0:16:12.34:115,12,0	0/0:18,0:18:27.09:0,27,806	0/1:15,0:10:42.92:43,0,60	1/1:3,0:2:3.01:40,3,0	0/0:43,0:43:72.25:0,72,3122	0/0:37,0:36:99:0,105,4178	0/1:39,0:39:99:863,0,531	0/1:40,0:39:99:314,0,460	0/0:24,0:24:9.03:0,9,229	0/0:27,0:27:33.11:0,33,771	0/0:27,0:27:81.26:0,81,2845	1/1:3,7:9:17.85:203,18,0	0/0:9,0:8:4.78:0,5,41	0/1:6,22:27:30.35:30,0,71	0/0:2,0:1:2.92:0,3,17	0/0:10,0:9:17.47:0,17,144	0/0:35,0:34:96.31:0,96,3826	0/0:7,0:2:6.02:0,6,115	0/1:25,0:23:99:201,0,142	0/0:18,14:32:15.47:0,15,588	0/1:11,0:11:22.71:80,0,23
chr10	78240900	.	ACAACAGCAGCAG	A	3428.50	PASS	AB=0.832;AC=15;AF=0.268;AN=56;BaseQRankSum=5.020;DP=575;FS=4.406;HRun=0;HaplotypeScore=177.6768;InbreedingCoeff=0.2780;MQ=48.75;MQ0=35;MQRankSum=-4.673;QD=16.02;ReadPosRankSum=-0.669;VQSLOD=2.4319;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:15.07:0,15,125	0/1:5,2:7:59.56:204,0,60	0/0:3,0:1:3.01:0,3,122	0/0:11,0:4:9.01:0,9,128	0/1:6,5:7:13.33:13,0,20	0/0:8,0:3:1.72:0,2,4	0/0:49,0:44:83.80:0,84,2101	1/1:24,0:14:29.42:240,29,0	0/0:21,0:21:36.09:0,36,1169	0/1:15,0:10:16.34:110,0,16	1/1:3,0:2:3.01:60,3,0	0/0:43,0:43:72.25:0,72,3406	0/0:37,0:36:99:0,108,4062	0/1:31,11:42:99:1600,0,152	0/1:14,26:40:99:510,0,181	0/0:25,0:25:9.33:0,9,193	0/0:27,0:27:33.07:0,33,945	0/0:26,0:26:78.11:0,78,2741	1/1:9,0:8:11.71:82,12,0	0/0:8,0:7:3.45:0,3,22	0/1:26,0:25:12.96:13,0,39	0/0:2,0:1:1.25:0,1,3	0/0:10,0:9:9.04:0,9,40	0/0:35,0:34:93.28:0,93,3921	0/0:8,0:3:5.93:0,6,115	0/1:25,1:24:1.68:373,0,2	0/0:32,0:32:31.55:0,32,421	1/1:11,0:11:28.84:225,29,0
chr10	78240905	.	AGC	A	142.57	PASS	AB=0.949;AC=11;AF=0.196;AN=56;BaseQRankSum=7.411;DP=565;FS=12.543;HRun=0;HaplotypeScore=116.2274;InbreedingCoeff=0.1225;MQ=48.65;MQ0=31;MQRankSum=-3.595;QD=1.08;ReadPosRankSum=-1.500;VQSLOD=1.5110;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:3.11:0,3,108	0/1:6,0:6:0.88:1,0,70	0/0:3,0:2:3.01:0,3,61	0/1:8,0:7:19.46:19,0,97	0/0:12,0:7:6.02:0,6,73	0/0:11,0:6:0.91:0,1,44	0/0:41,0:36:29.55:0,30,965	0/0:21,0:11:10.84:0,11,265	0/0:22,0:22:47.64:0,48,834	1/1:14,0:9:2.14:16,2,0	1/1:3,0:2:0.47:1,0,0	0/0:43,0:43:75.26:0,75,1451	0/0:37,0:36:99:0,107,1675	0/1:32,7:39:99:111,0,369	0/0:39,0:39:23.05:0,23,353	0/0:27,0:27:5.51:0,6,80	0/0:30,0:30:38.16:0,38,669	0/0:27,0:27:81.16:0,81,1328	0/0:13,0:12:10.64:0,11,161	1/1:8,0:7:2.98:26,3,0	0/0:28,0:27:6.30:0,6,33	0/0:2,0:1:0:0,0,0	0/0:8,0:7:3.73:0,4,50	0/0:34,0:33:92.16:0,92,1556	0/0:11,0:6:3.01:0,3,56	0/1:23,1:22:8.11:8,0,222	0/1:28,2:30:79.71:80,0,102	0/0:7,1:9:6.05:0,6,163
chr10	78241799	.	ACT	A	9859.55	PASS	AB=0.941;AC=23;AF=0.411;AN=56;BaseQRankSum=15.923;DP=603;FS=1.001;HRun=0;HaplotypeScore=74.9168;InbreedingCoeff=0.9503;MQ=85.69;MQ0=1;MQRankSum=-7.561;QD=39.60;ReadPosRankSum=0.678;VQSLOD=6.8062;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.31:0,90,1797	1/1:0,7:7:18.06:294,18,0	0/0:21,0:21:60.20:0,60,1165	0/0:17,0:17:48.06:0,48,866	1/1:0,24:24:66.23:1077,66,0	0/0:21,0:21:60.21:0,60,1207	0/0:19,0:19:57.20:0,57,1145	1/1:0,30:30:87.30:1419,87,0	0/0:22,0:22:63.22:0,63,1279	1/1:0,26:26:78.27:1273,78,0	1/1:0,24:24:63.22:1028,63,0	0/0:29,0:29:87.30:0,87,1737	0/0:29,0:29:87.26:0,87,1727	1/1:0,15:15:45.15:734,45,0	1/1:0,26:26:69.24:1126,69,0	0/0:26,0:26:78.27:0,78,1585	0/0:23,0:23:69.24:0,69,1376	0/0:23,0:23:69.19:0,69,1344	1/1:0,17:17:51.16:804,51,0	1/1:0,22:22:63.22:1027,63,0	1/1:0,5:5:11.78:196,12,0	0/0:23,0:23:69.22:0,69,1363	0/0:19,0:19:57.18:0,57,1105	0/0:22,0:22:66.23:0,66,1341	0/0:16,0:16:48.16:0,48,974	0/1:30,2:32:1.60:2,0,1698	1/1:0,21:20:54.18:881,54,0	0/0:13,0:13:39.13:0,39,793
chr10	78242523	.	C	CTTT	7841.51	PASS	AB=0.947;AC=23;AF=0.411;AN=56;BaseQRankSum=5.894;DP=587;FS=12.193;HRun=8;HaplotypeScore=121.8510;InbreedingCoeff=0.9076;MQ=69.72;MQ0=0;MQRankSum=-3.407;QD=27.81;ReadPosRankSum=-5.094;VQSLOD=0.9183;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.22:0,78,1010	1/1:0,7:7:15.05:302,15,0	0/0:10,0:10:24.04:0,24,276	0/0:11,0:9:17.91:0,18,206	1/1:10,16:27:69.21:1268,69,0	0/0:25,0:25:66.21:0,66,867	0/0:12,0:12:30.54:0,31,394	1/1:7,0:30:67.08:562,67,0	0/0:22,0:22:57.04:0,57,748	1/1:11,11:24:58.59:1002,59,0	1/1:10,24:35:75.25:1442,75,0	0/0:12,0:12:36.12:0,36,473	0/0:27,0:27:66.18:0,66,867	1/1:3,13:19:39.13:720,39,0	1/1:6,15:22:57.18:1081,57,0	0/0:24,0:24:60.14:0,60,743	0/0:31,0:31:87.12:0,87,1125	0/0:21,0:21:60.17:0,60,771	1/1:4,0:24:52.10:377,52,0	1/1:2,0:24:47.30:416,47,0	1/1:5,0:13:3.65:120,4,0	0/0:14,0:14:42.14:0,42,552	0/0:17,0:17:45.15:0,45,592	0/0:12,0:12:36.12:0,36,473	0/0:25,0:25:69.21:0,69,892	0/1:17,1:18:9.14:9,0,578	1/1:8,0:39:63.96:541,64,0	0/0:13,0:13:36.12:0,36,473
chr10	78242619	.	C	CT	24086.90	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-10.412;DP=628;FS=1.472;HRun=0;HaplotypeScore=59.7423;InbreedingCoeff=0.9980;MQ=79.63;MQ0=0;MQRankSum=-5.877;QD=43.79;ReadPosRankSum=2.331;VQSLOD=5.4068;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,1973	1/1:0,8:8:21.07:336,21,0	0/0:11,0:11:32.98:0,33,406	0/0:18,0:18:50.63:0,51,578	1/1:0,22:22:66.23:1052,66,0	1/1:0,23:23:66.23:1055,66,0	1/1:0,23:23:57.19:911,57,0	1/1:2,21:23:63.21:1006,63,0	1/1:0,22:22:60.20:958,60,0	1/1:1,22:23:63.20:983,63,0	1/1:1,16:17:42.14:671,42,0	1/1:0,23:23:66.23:1055,66,0	1/1:0,21:21:60.20:959,60,0	1/1:0,20:20:57.19:911,57,0	1/1:1,25:26:78.27:1246,78,0	1/1:0,26:26:69.24:1103,69,0	1/1:0,22:22:57.17:911,57,0	1/1:0,18:18:48.16:767,48,0	1/1:0,17:17:51.17:816,51,0	1/1:0,26:26:72.19:1121,72,0	1/1:1,31:32:87.30:1390,87,0	1/1:0,11:11:30.10:480,30,0	1/1:1,17:18:36.12:575,36,0	1/1:0,26:26:75.26:1199,75,0	1/1:0,20:20:54.18:863,54,0	1/1:1,31:32:93.29:1440,93,0	1/1:2,37:39:99:1798,114,0	1/1:1,11:12:30.10:479,30,0
chr10	78244985	.	GA	G	7381.03	PASS	AB=0.730;AC=38;AF=0.679;AN=56;BaseQRankSum=10.484;DP=609;FS=2.659;HRun=11;HaplotypeScore=83.5209;InbreedingCoeff=0.8160;MQ=73.07;MQ0=0;MQRankSum=0.079;QD=16.62;ReadPosRankSum=1.042;VQSLOD=5.6908;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,1:23:38.31:0,38,585	1/1:3,8:11:23.96:197,24,0	0/1:15,2:16:15.65:16,0,135	0/0:12,0:13:5.25:0,5,122	1/1:4,18:22:56.89:462,57,0	1/1:6,17:23:18.93:358,19,0	0/1:3,10:13:17.02:84,0,17	1/1:7,24:32:53.83:518,54,0	1/1:4,19:23:50.93:419,51,0	1/1:2,20:22:30.93:460,31,0	1/1:9,14:23:32.92:271,33,0	0/0:23,0:23:45.87:0,46,557	0/0:24,0:24:59.90:0,60,593	1/1:3,15:18:44.94:369,45,0	1/1:8,25:33:16.91:552,17,0	1/1:0,28:28:74.90:616,75,0	1/1:3,15:18:41.95:345,42,0	0/0:22,1:23:32.41:0,32,511	1/1:6,23:29:68.74:550,69,0	1/1:2,24:26:68.54:557,69,0	1/1:4,10:14:29.96:246,30,0	0/0:20,0:22:41.94:0,42,430	0/0:19,0:19:51.09:0,51,531	0/0:18,0:18:42.11:0,42,448	1/1:1,21:23:58.96:474,59,0	1/1:1,0:13:22.19:64,22,0	1/1:7,31:38:92.87:761,93,0	1/1:1,0:18:22.41:65,22,0
chr10	78245328	.	C	CG	18759.77	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-8.606;DP=664;FS=0.000;HRun=1;HaplotypeScore=67.4896;InbreedingCoeff=0.9983;MQ=80.42;MQ0=0;MQRankSum=-2.141;QD=43.73;ReadPosRankSum=1.665;VQSLOD=4.7510;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,178,2453	1/1:0,12:12:30.10:479,30,0	0/0:16,0:16:25.58:0,26,545	0/0:17,0:17:34.27:0,34,492	1/1:0,25:25:66.23:1054,66,0	1/1:1,27:28:72.25:1150,72,0	1/1:0,32:32:78.27:1246,78,0	1/1:0,26:26:78.24:1201,78,0	1/1:0,23:23:66.23:1053,66,0	1/1:1,14:15:45.13:679,45,0	1/1:0,13:13:39.13:623,39,0	0/0:32,0:32:96.28:0,96,1288	0/0:25,0:25:75.23:0,75,1025	1/1:0,35:36:99:1662,105,0	1/1:0,25:25:60.20:959,60,0	1/1:0,14:14:42.14:671,42,0	1/1:0,30:30:90.31:1437,90,0	0/0:30,0:30:84.25:0,84,1155	1/1:2,20:22:63.21:987,63,0	1/1:0,13:13:39.13:623,39,0	1/1:1,50:51:99:2252,141,0	0/0:15,0:15:45.15:0,45,629	0/0:11,0:11:30.06:0,30,389	0/0:29,0:29:84.28:0,84,1172	1/1:1,16:17:39.13:623,39,0	1/1:0,20:20:60.20:959,60,0	1/1:0,21:21:51.17:814,51,0	1/1:0,6:6:18.06:287,18,0
chr10	78245493	.	C	CT	4480.67	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-6.576;DP=522;FS=1.665;HRun=10;HaplotypeScore=62.8284;InbreedingCoeff=0.9221;MQ=77.07;MQ0=0;MQRankSum=0.875;QD=20.94;ReadPosRankSum=-2.487;VQSLOD=4.9355;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:35:97.85:0,98,783	1/1:0,3:3:9.02:96,9,0	0/0:18,0:18:6.58:0,7,194	0/0:15,0:13:1.01:0,1,45	1/1:4,21:25:53.95:534,54,0	0/0:22,0:22:62.88:0,63,509	0/0:16,0:17:40.95:0,41,320	1/1:9,24:33:68.98:708,69,0	0/0:16,0:16:38.93:0,39,320	1/1:7,12:19:26.46:471,26,0	1/1:5,18:24:23.74:426,24,0	0/0:22,0:22:62.89:0,63,510	0/0:22,0:22:31.87:0,32,415	1/1:3,16:20:36.09:382,36,0	1/1:3,7:11:20.88:206,21,0	0/0:15,0:15:38.92:0,39,314	0/0:26,0:26:68.90:0,69,563	0/0:15,0:15:28.02:0,28,305	1/1:11,12:23:35.45:360,35,0	1/1:4,14:18:42.06:435,42,0	1/1:1,13:14:36.09:382,36,0	0/0:11,1:12:3.98:0,4,239	0/0:17,0:17:44.94:0,45,369	0/0:14,0:14:41.95:0,42,345	0/0:12,0:12:35.96:0,36,296	0/0:22,0:22:44.91:0,45,369	1/1:5,18:23:45.11:480,45,0	0/0:8,0:8:17.96:0,18,145
chr10	78245666	.	TA	T	1954.55	PASS	AC=18;AF=0.333;AN=54;BaseQRankSum=6.535;DP=448;FS=5.085;HRun=11;HaplotypeScore=57.3405;InbreedingCoeff=0.8711;MQ=71.06;MQ0=1;MQRankSum=1.094;QD=14.06;ReadPosRankSum=2.456;VQSLOD=3.9946;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:27.07:0,27,288	1/1:2,10:12:17.97:148,18,0	0/0:30,0:16:16.68:0,17,159	0/0:18,1:13:21.26:0,21,201	1/1:0,16:19:53.98:404,54,0	0/0:20,2:22:13.85:0,14,549	0/0:12,0:12:28.61:0,29,284	0/0:37,1:37:65.56:0,66,884	0/0:9,0:9:27.05:0,27,275	1/1:2,20:22:56.91:463,57,0	1/1:3,11:14:0.98:214,1,0	0/0:16,0:17:32.15:0,32,346	0/0:15,0:15:39.10:0,39,415	1/1:0,6:6:17.98:148,18,0	1/1:1,9:10:20.97:172,21,0	0/0:13,0:13:29.02:0,29,303	0/0:16,2:18:1.87:0,2,419	1/1:2,19:21:50.94:419,51,0	0/0:5,0:21:45.59:0,46,234	0/0:4,0:21:54.59:0,55,317	0/0:0,0:3:8.52:0,9,43	./.	0/0:11,1:12:2.35:0,2,209	0/0:3,0:3:9:0,9,87	0/0:20,1:21:35.45:0,35,553	1/1:3,0:24:43.94:132,44,0	0/0:2,0:21:39.94:0,40,217	1/1:1,0:11:18.33:53,18,0
chr10	78247179	.	C	CA	1293.30	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-3.074;DP=642;FS=0.000;HRun=6;HaplotypeScore=72.3779;InbreedingCoeff=0.7774;MQ=76.00;MQ0=0;MQRankSum=-2.956;QD=24.87;ReadPosRankSum=-0.656;VQSLOD=3.2836;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1010	0/0:9,0:9:24.04:0,24,238	0/0:27,0:25:57.22:0,57,547	0/1:8,0:8:17.79:18,0,76	0/0:39,0:39:99:0,105,1057	0/0:18,0:18:45.09:0,45,453	0/0:18,0:18:48.10:0,48,490	0/0:34,0:33:90.20:0,90,914	0/0:14,0:14:39.09:0,39,398	0/0:35,0:34:93.21:0,93,949	0/0:30,0:31:89.22:0,89,886	0/0:21,0:21:57.05:0,57,558	0/0:22,0:22:60.06:0,60,591	0/0:24,0:24:72.16:0,72,729	0/0:20,0:20:57.13:0,57,582	0/0:29,0:29:81.14:0,81,806	0/0:15,0:15:39.08:0,39,398	0/0:24,0:24:69.16:0,69,704	0/0:27,0:27:75.15:0,75,755	0/0:24,0:24:72.15:0,72,727	0/0:16,0:16:45.07:0,45,444	0/0:20,0:20:51.11:0,51,520	0/0:27,0:27:78.16:0,78,789	0/0:10,0:10:24.05:0,24,245	0/0:26,0:26:78.16:0,78,789	1/1:3,15:18:17.54:536,18,0	0/0:26,0:26:75.17:0,75,764	1/1:0,26:26:69.22:868,69,0
chr10	78247278	.	TC	T	2130.71	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=1.268;DP=472;FS=8.424;HRun=10;HaplotypeScore=56.9805;InbreedingCoeff=0.8133;MQ=80.25;MQ0=0;MQRankSum=-1.184;QD=15.78;ReadPosRankSum=3.925;VQSLOD=3.6672;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:39.11:0,39,431	0/0:7,0:7:6.02:0,6,66	0/0:16,0:16:14.49:0,14,178	0/0:17,0:15:21.05:0,21,162	0/0:22,0:22:57.15:0,57,630	0/0:6,0:9:5.85:0,6,47	0/0:9,0:17:35.44:0,35,180	1/1:13,16:29:45.84:392,46,0	0/0:4,0:15:23.55:0,24,130	0/0:19,0:19:21.02:0,21,219	0/0:15,0:15:39.11:0,39,431	0/0:27,0:27:63.15:0,63,682	0/0:17,1:18:16.04:0,16,396	0/1:16,0:16:14.46:14,0,287	0/0:21,1:22:22:0,22,444	0/0:2,0:7:14.34:0,14,77	0/0:6,0:15:20.35:0,20,137	0/0:33,0:33:58.29:0,58,841	1/1:3,9:12:26.99:234,27,0	1/1:3,23:26:65.98:573,66,0	1/1:2,16:18:41.98:365,42,0	0/0:10,0:11:20.04:0,20,237	0/0:9,0:9:21.06:0,21,232	0/0:7,0:7:14.98:0,15,144	0/0:15,0:18:31.16:0,31,187	0/0:8,0:11:11.68:0,12,70	1/1:2,32:34:83.95:729,84,0	0/0:7,0:7:8.92:0,9,61
chr10	78247492	.	G	GAGTCGAC	15158.70	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-11.209;DP=643;FS=17.943;HRun=0;HaplotypeScore=137.4579;InbreedingCoeff=0.9876;MQ=78.93;MQ0=0;MQRankSum=-16.308;QD=90.23;ReadPosRankSum=1.821;VQSLOD=4.8548;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.30:0,87,2232	0/0:9,0:9:24.08:0,24,551	0/0:16,0:16:45.15:0,45,1118	0/0:22,0:22:48.16:0,48,1238	0/0:16,0:16:48.13:0,48,1124	1/1:6,12:19:48.16:1929,48,0	1/1:11,15:27:57.20:2189,57,0	0/0:39,0:39:99:0,111,2865	1/1:5,8:14:27.09:1065,27,0	0/0:20,0:20:57.20:0,57,1503	0/0:27,0:27:78.24:0,78,1919	0/0:20,0:20:57.18:0,57,1449	0/0:16,0:16:45.15:0,45,1157	0/0:26,0:26:75.26:0,75,1949	0/0:26,0:26:78.25:0,78,1931	1/1:6,14:21:51.18:2048,51,0	1/1:2,8:12:27.09:1085,27,0	0/0:35,0:35:99:0,102,2544	0/0:14,0:14:42.14:0,42,1105	0/0:26,0:26:75.26:0,75,1899	0/0:30,0:30:81.26:0,81,2016	0/0:24,0:24:72.25:0,72,1898	0/0:19,0:19:48.16:0,48,1264	0/0:29,0:29:87.26:0,87,2200	1/1:7,18:27:54.19:2169,54,0	1/1:8,18:29:8.16:2983,8,0	0/0:31,0:31:93.32:0,93,2404	1/1:3,14:19:42.14:1690,42,0
chr10	78247817	.	C	CA	653.52	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.774;DP=604;FS=7.438;HRun=6;HaplotypeScore=76.4098;InbreedingCoeff=0.9931;MQ=83.75;MQ0=0;MQRankSum=-2.001;QD=21.78;ReadPosRankSum=-3.870;VQSLOD=1.7087;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:99:0,117,1193	0/0:7,0:7:21.05:0,21,214	0/0:27,0:27:56.63:0,57,569	0/0:17,0:17:25.11:0,25,270	0/0:15,0:15:39.08:0,39,397	0/0:21,0:21:54.12:0,54,551	0/0:16,0:16:45.10:0,45,459	1/1:11,19:30:60.19:748,60,0	0/0:17,0:17:42.07:0,42,420	0/0:22,0:22:60.13:0,60,611	0/0:13,0:13:36.08:0,36,367	0/0:29,0:29:75.15:0,75,758	0/0:15,0:15:33.07:0,33,336	0/0:19,0:19:57.12:0,57,575	0/0:24,0:24:72.16:0,72,734	0/0:13,0:13:36.08:0,36,367	0/0:33,0:33:93.21:0,93,948	0/0:15,0:15:45.08:0,45,451	0/0:16,0:16:39.08:0,39,398	0/0:15,0:15:42.09:0,42,428	0/0:43,0:43:99:0,108,1095	0/0:25,0:25:66.14:0,66,673	0/0:21,0:21:51.11:0,51,520	0/0:28,0:28:78.16:0,78,788	0/0:22,0:22:57.12:0,57,581	0/0:28,0:27:69.14:0,69,699	0/0:21,0:21:54.10:0,54,543	0/0:10,0:10:30.07:0,30,306
chr10	78247910	.	T	TG	2234.03	PASS	AB=0.976;AC=33;AF=0.589;AN=56;BaseQRankSum=13.363;DP=496;FS=2.721;HRun=8;HaplotypeScore=121.5471;InbreedingCoeff=0.7454;MQ=74.39;MQ0=2;MQRankSum=-3.160;QD=7.50;ReadPosRankSum=2.274;VQSLOD=1.1012;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:87.01:0,87,790	1/1:5,0:5:10.78:46,11,0	0/0:15,0:13:6.07:0,6,153	0/0:16,0:15:29.21:0,29,218	1/1:10,0:13:33.01:147,33,0	0/0:21,0:21:51:0,51,461	0/0:23,0:23:47.98:0,48,432	1/1:19,0:19:0.47:69,0,0	0/0:19,1:20:13.40:0,13,377	0/1:12,0:13:2.90:48,0,3	1/1:9,0:9:16.07:68,16,0	0/1:26,0:26:1.10:162,0,1	1/1:21,0:22:23.47:208,23,0	1/1:25,0:26:53.99:230,54,0	1/1:15,0:16:13.81:134,14,0	0/0:13,0:13:36.01:0,36,329	0/0:31,0:31:84.04:0,84,768	0/0:10,0:10:24.01:0,24,220	0/1:15,0:15:43.30:52,0,43	1/1:13,0:15:9.83:104,10,0	1/1:26,0:26:35.29:147,35,0	1/1:19,0:20:17.09:150,17,0	1/1:9,0:9:5.65:39,6,0	1/1:26,0:26:17.42:208,17,0	0/0:15,0:14:39:0,39,350	1/1:7,9:16:24.06:267,24,0	1/1:12,0:12:29.35:122,29,0	1/1:0,10:10:21.06:242,21,0
chr10	78247911	.	G	GC	1952.06	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=4.187;DP=506;FS=1.868;HRun=0;HaplotypeScore=127.0597;InbreedingCoeff=0.8220;MQ=75.05;MQ0=2;MQRankSum=-0.832;QD=15.02;ReadPosRankSum=3.827;VQSLOD=5.1319;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.27:0,96,1284	0/0:5,0:5:11.40:0,11,62	0/0:16,0:14:38.32:0,38,384	0/0:15,1:15:36.23:0,36,392	0/0:15,0:15:31.91:0,32,157	0/0:21,0:21:63.17:0,63,812	0/0:23,0:23:66.14:0,66,819	0/0:22,0:22:53.75:0,54,335	0/0:20,0:20:51:0,51,718	0/0:14,0:14:35.11:0,35,232	0/0:10,0:10:15.32:0,15,87	1/1:11,16:27:17.19:475,17,0	1/1:10,12:22:6.74:397,7,0	0/0:26,0:26:67.76:0,68,367	0/0:16,0:16:42.43:0,42,248	0/0:13,0:13:39.12:0,39,528	0/0:30,0:30:90.27:0,90,1219	0/0:10,0:10:30.06:0,30,380	0/0:16,0:16:43.89:0,44,339	0/0:16,0:16:41.17:0,41,246	0/0:26,0:26:43.97:0,44,260	1/1:5,15:20:40.86:442,41,0	1/1:4,5:9:1.47:103,1,0	1/1:7,19:26:46.31:609,46,0	0/0:15,0:14:42.09:0,42,559	0/1:15,0:15:40.78:41,0,120	0/0:12,0:12:30.68:0,31,155	1/1:11,0:11:17.65:62,18,0
chr10	78247916	.	G	GGGA	12674.15	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-0.884;DP=530;FS=3.133;HRun=0;HaplotypeScore=106.4584;InbreedingCoeff=0.9920;MQ=73.29;MQ0=2;MQRankSum=-4.198;QD=41.28;ReadPosRankSum=-0.731;VQSLOD=5.6519;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:78.37:0,78,1283	1/1:0,5:6:12.04:255,12,0	0/0:14,0:12:24.28:0,24,291	0/0:16,0:15:28.37:0,28,324	1/1:4,13:17:42.14:816,42,0	0/0:19,0:19:54.18:0,54,840	0/0:23,0:23:48.14:0,48,709	1/1:2,23:27:75.14:1101,75,0	0/0:21,0:21:56.64:0,57,788	1/1:5,11:17:39.07:614,39,0	1/1:1,9:11:18.53:385,19,0	1/1:8,0:24:53.83:1018,54,0	1/1:10,0:22:60.11:1011,60,0	1/1:3,22:25:60.21:1260,60,0	1/1:3,13:16:42.14:878,42,0	0/0:14,0:14:36.11:0,36,541	0/0:31,0:31:90.24:0,90,1318	0/0:9,0:9:24.08:0,24,375	1/1:7,11:18:33.08:556,33,0	1/1:7,11:19:42.04:777,42,0	1/1:7,23:31:39.60:831,40,0	1/1:5,0:20:45.15:927,45,0	1/1:6,0:11:17.96:290,18,0	1/1:10,0:29:68.44:1293,68,0	0/0:16,0:15:36.12:0,36,561	0/0:15,0:15:26.75:0,27,156	1/1:1,12:14:32.63:661,33,0	0/0:11,0:11:20.47:0,20,88
chr10	78248346	.	CACACAGACACAG	C	2215.10	PASS	AB=1.000;AC=36;AF=0.692;AN=52;BaseQRankSum=0.709;DP=572;FS=1.716;HRun=0;HaplotypeScore=190.5441;InbreedingCoeff=0.5557;MQ=75.07;MQ0=11;MQRankSum=2.395;QD=5.99;ReadPosRankSum=2.565;VQSLOD=2.7880;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:36.12:0,36,904	1/1:6,0:6:8.88:86,9,0	0/0:35,0:28:6:0,6,53	./.	1/1:18,6:24:3.01:53,3,0	1/1:20,0:20:21.02:268,21,0	0/1:23,0:22:0:0,0,0	1/1:21,0:20:11.73:71,12,0	1/1:21,0:21:18.05:250,18,0	1/1:17,8:25:17.89:280,18,0	1/1:15,0:15:0.47:1,0,0	1/1:16,0:16:12.04:190,12,0	1/1:18,0:18:3.01:84,3,0	1/1:17,0:17:27.05:380,27,0	1/1:15,13:28:2.59:82,3,0	1/1:29,0:29:3.01:81,3,0	0/1:25,0:25:48.61:106,0,49	0/0:19,0:18:45.10:0,45,803	0/0:16,0:13:5.14:0,5,33	0/0:12,0:12:9.46:0,9,134	0/0:32,0:32:7.35:0,7,48	1/1:14,0:13:3.01:40,3,0	1/1:11,0:11:9.01:105,9,0	1/1:19,0:18:6:71,6,0	1/1:24,0:24:3.01:89,3,0	1/1:14,0:14:14.96:142,15,0	0/0:19,0:19:3.48:0,3,33	./.
chr10	78248372	.	CACAG	C	223.62	PASS	AB=0.955;AC=12;AF=0.214;AN=56;BaseQRankSum=6.377;DP=496;FS=7.794;HRun=0;HaplotypeScore=117.1423;InbreedingCoeff=0.4422;MQ=53.22;MQ0=22;MQRankSum=-1.366;QD=1.73;ReadPosRankSum=3.287;VQSLOD=1.5591;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:39:57.19:0,57,1081	0/0:8,0:8:23.47:0,23,253	0/0:11,0:7:11.90:0,12,128	0/0:7,0:5:2.84:0,3,14	0/0:19,0:17:21.03:0,21,253	0/0:23,0:22:50.70:0,51,553	0/0:13,0:10:18.04:0,18,229	0/0:18,0:16:48.01:0,48,574	0/0:15,0:15:29.76:0,30,297	0/0:18,0:17:44.58:0,45,417	0/0:16,0:16:1.25:0,1,3	1/1:15,0:15:14.94:116,15,0	1/1:19,0:19:2.79:29,3,0	0/0:24,0:24:47.54:0,48,472	0/0:23,0:23:22.82:0,23,328	0/0:25,0:25:14.13:0,14,201	0/0:20,0:20:9.75:0,10,428	0/1:17,3:19:7.49:7,0,736	0/0:10,0:9:20.75:0,21,191	0/0:13,0:13:29.56:0,30,267	0/0:35,0:32:50.31:0,50,430	0/1:12,0:10:1.81:32,0,2	1/1:9,0:9:6.38:53,6,0	1/1:22,0:22:2.47:23,2,0	0/0:23,0:23:1.84:0,2,95	0/1:12,0:12:41.24:102,0,41	0/1:19,1:20:6.32:6,0,185	0/0:3,0:3:0.44:0,0,1
chr10	78248382	.	GACACAGACACAGACACACACACACAC	G	3195.91	PASS	AB=1.000;AC=25;AF=0.481;AN=52;BaseQRankSum=0.216;DP=469;FS=6.454;HRun=0;HaplotypeScore=225.5386;InbreedingCoeff=0.2902;MQ=49.45;MQ0=21;MQRankSum=1.871;QD=12.01;ReadPosRankSum=-2.111;VQSLOD=1.8358;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:39:39.13:0,39,1923	0/1:7,0:7:43.89:44,0,131	0/0:3,0:2:6:0,6,53	./.	0/0:20,0:18:21.04:0,21,918	1/1:23,0:22:42.10:869,42,0	0/1:10,0:7:54.37:65,0,54	0/1:20,0:18:38.67:39,0,126	1/1:14,0:14:24.07:438,24,0	0/1:14,0:13:63.72:64,0,580	0/0:17,0:17:7.64:0,8,279	1/1:17,0:16:21.06:283,21,0	1/1:19,0:19:2.44:171,2,0	0/1:23,0:23:99:102,0,757	0/0:24,0:24:18.53:0,19,643	1/1:1,20:21:2.46:199,2,0	0/1:18,0:18:99:538,0,134	0/0:20,0:19:51.12:0,51,2240	0/0:10,0:9:19.25:0,19,587	0/0:15,0:15:29.89:0,30,891	0/0:29,0:26:35.47:0,35,933	1/1:14,0:13:3.01:40,3,0	1/1:10,0:10:9.01:105,9,0	1/1:20,0:20:8.73:88,9,0	1/1:3,18:21:2.15:206,2,0	0/1:15,0:15:99:124,0,142	0/0:18,0:18:9.49:0,9,320	./.
chr10	78248386	.	CAGACACAG	C	2287.12	PASS	AB=1.000;AC=30;AF=0.577;AN=52;BaseQRankSum=4.426;DP=465;FS=7.220;HRun=0;HaplotypeScore=133.9754;InbreedingCoeff=-0.1958;MQ=49.28;MQ0=19;MQRankSum=2.269;QD=5.99;ReadPosRankSum=-1.130;VQSLOD=1.7078;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:35:39:0,39,789	0/1:5,0:5:35.50:80,0,35	0/0:3,0:2:6:0,6,53	./.	0/1:18,0:16:12.81:13,0,289	1/1:20,0:19:40.37:338,40,0	0/1:9,0:6:9.54:10,0,33	0/1:20,0:18:20.40:57,0,20	1/1:14,0:14:12.07:255,12,0	0/1:14,0:13:38.58:254,0,39	0/0:8,11:19:11.41:0,11,196	1/1:17,0:16:22.31:234,22,0	1/1:20,0:20:2.69:56,3,0	0/1:26,0:26:99:329,0,361	0/1:23,0:23:47.75:48,0,138	1/1:20,0:20:2.68:53,3,0	0/1:15,0:15:31.67:133,0,32	0/0:20,0:19:47.90:0,48,605	0/1:12,0:11:40.59:63,0,41	0/1:16,0:16:19.90:20,0,27	0/1:30,0:26:13.44:13,0,71	1/1:15,0:14:3.01:40,3,0	1/1:10,0:10:9.01:105,9,0	0/1:22,0:22:14.73:66,0,15	1/1:19,0:20:2.84:61,3,0	0/1:17,0:17:99:159,0,180	0/1:19,0:19:5.98:62,0,6	./.
chr10	78248388	.	GACACAGAC	G	2346.92	PASS	AB=1.000;AC=35;AF=0.700;AN=50;BaseQRankSum=5.541;DP=468;FS=9.104;HRun=0;HaplotypeScore=141.7010;InbreedingCoeff=0.1531;MQ=49.37;MQ0=19;MQRankSum=-0.347;QD=6.38;ReadPosRankSum=0.887;VQSLOD=1.9033;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:34:38.78:0,39,533	0/1:5,0:5:17.20:17,0,50	./.	./.	0/0:19,0:17:4.86:0,5,258	1/1:19,0:18:36.04:364,36,0	0/1:8,0:5:15.72:58,0,16	1/1:20,0:18:5.91:29,6,0	1/1:13,0:13:22.95:185,23,0	0/1:14,0:13:65.83:113,0,66	0/0:19,0:19:12.04:0,12,181	1/1:19,0:18:27.01:261,27,0	1/1:20,0:20:2.69:56,3,0	0/1:26,0:26:99:120,0,360	0/1:23,0:23:34.17:34,0,251	1/1:20,0:20:2.68:47,3,0	1/1:15,0:15:2.26:179,2,0	0/0:23,0:22:19.16:0,19,336	1/1:13,0:12:20.61:215,21,0	1/1:16,0:16:16.55:267,17,0	0/1:31,0:27:6.52:249,0,7	1/1:16,0:15:2.99:24,3,0	1/1:10,0:10:5.91:40,6,0	1/1:22,0:22:9.04:73,9,0	1/1:20,0:20:2.84:56,3,0	0/1:19,0:18:34.67:35,0,129	1/1:4,15:19:10.83:87,11,0	./.
chr10	78248392	.	CAG	C	1423.72	PASS	AB=1.000;AC=33;AF=0.660;AN=50;BaseQRankSum=7.473;DP=481;FS=9.041;HRun=0;HaplotypeScore=121.3514;InbreedingCoeff=-0.0526;MQ=50.06;MQ0=16;MQRankSum=2.457;QD=3.52;ReadPosRankSum=0.587;VQSLOD=1.4282;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,7:35:41.69:0,42,391	0/1:5,0:5:26.43:26,0,40	./.	./.	0/1:20,0:18:3.71:4,0,286	1/1:18,0:18:31.32:168,31,0	0/1:11,0:8:15.55:16,0,30	0/0:16,0:15:10.10:0,10,68	1/1:13,0:13:11.89:119,12,0	0/1:15,0:15:88.39:108,0,88	0/0:21,0:21:14.40:0,14,221	1/1:20,0:19:27.57:167,28,0	1/1:20,0:20:2.73:14,3,0	0/1:27,0:27:99:114,0,433	0/1:24,0:24:6.31:6,0,273	1/1:20,0:20:2.88:15,3,0	0/1:16,0:16:14.81:67,0,15	0/1:23,0:22:11.72:12,0,231	1/1:14,0:13:11.16:126,11,0	1/1:17,0:17:20.86:176,21,0	0/1:33,0:29:31.74:219,0,32	1/1:17,0:16:2.99:24,3,0	1/1:10,0:10:5.88:40,6,0	0/1:21,0:21:8.73:30,0,9	1/1:20,0:20:2.84:14,3,0	0/1:22,0:21:43.69:44,0,264	1/1:18,1:19:0.58:71,1,0	./.
chr10	78248394	.	GAC	G	1237.02	PASS	AB=0.793;AC=25;AF=0.500;AN=50;BaseQRankSum=6.716;DP=487;FS=4.482;HRun=0;HaplotypeScore=118.3244;InbreedingCoeff=0.4605;MQ=50.20;MQ0=15;MQRankSum=0.806;QD=4.56;ReadPosRankSum=1.477;VQSLOD=2.7257;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:35:3.60:0,4,149	0/0:5,0:5:8.88:0,9,85	./.	./.	0/0:20,0:18:18.90:0,19,275	1/1:8,11:19:26.74:278,27,0	0/1:7,4:8:15.46:58,0,15	0/1:17,0:16:11.67:12,0,60	1/1:10,3:13:11.61:101,12,0	0/0:15,0:15:15.86:0,16,162	0/0:22,0:22:18.04:0,18,248	1/1:9,10:19:18.05:197,18,0	1/1:19,0:20:2.77:15,3,0	0/0:26,0:26:33.11:0,33,489	0/0:25,1:26:0.69:0,1,358	1/1:20,0:20:3.01:33,3,0	1/1:6,9:16:17.98:175,18,0	0/0:22,0:21:1.89:0,2,69	1/1:8,6:13:16.81:151,17,0	0/1:11,6:17:0.99:128,0,1	0/1:27,9:32:61.82:62,0,96	./.	0/1:5,0:9:0.03:0,0,0	1/1:12,8:20:13.82:102,14,0	1/1:20,0:20:2.84:14,3,0	0/0:23,0:22:7.46:0,7,228	1/1:18,0:19:9.93:81,10,0	0/0:3,0:2:5.96:0,6,44
chr10	78248398	.	C	CAG	311.03	PASS	AB=0.975;AC=13;AF=0.250;AN=52;BaseQRankSum=6.045;DP=496;FS=1.363;HRun=0;HaplotypeScore=115.6762;InbreedingCoeff=0.0254;MQ=50.09;MQ0=16;MQRankSum=3.710;QD=1.52;ReadPosRankSum=1.465;VQSLOD=2.3751;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:20.73:0,21,346	0/0:5,0:5:14.97:0,15,150	./.	0/0:2,0:2:5.55:0,6,25	0/0:22,0:20:8.66:0,9,295	0/1:19,0:19:39.65:96,0,40	0/1:12,0:9:6.79:7,0,48	0/0:20,0:19:24.51:0,25,240	0/1:11,1:12:51.47:51,0,59	0/0:16,0:15:32.46:0,32,319	0/0:23,0:23:21.04:0,21,277	1/1:18,0:17:9.95:38,10,0	0/0:20,0:20:2.73:0,3,14	0/0:26,0:26:54.03:0,54,665	0/0:27,0:27:22.90:0,23,438	1/1:20,0:20:1.25:4,1,0	0/1:14,0:14:12.02:30,0,12	0/0:21,0:20:24.23:0,24,252	0/1:15,0:14:6.51:7,0,126	0/1:15,1:16:20.78:21,0,146	0/1:37,0:33:1.97:2,0,293	./.	0/0:8,0:8:0:0,0,0	0/1:20,1:21:2.92:152,0,3	0/0:20,0:20:2.67:0,3,14	0/0:23,0:22:4.68:0,5,183	0/1:19,1:20:38.18:38,0,57	0/0:3,0:2:5.67:0,6,34
chr10	78248641	.	G	GT	1626.43	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=0.102;DP=559;FS=0.000;HRun=6;HaplotypeScore=99.4835;InbreedingCoeff=0.8216;MQ=59.49;MQ0=22;MQRankSum=-2.748;QD=15.49;ReadPosRankSum=-1.580;VQSLOD=2.9663;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:55.33:0,55,580	0/0:10,0:10:18.04:0,18,184	0/0:12,0:9:10.14:0,10,70	0/1:7,0:3:0.63:9,0,1	0/0:26,0:26:60.11:0,60,603	0/0:28,0:27:6.25:0,6,218	0/0:10,0:10:18.04:0,18,184	0/0:37,0:34:83.19:0,83,823	0/0:15,0:13:25.01:0,25,205	0/0:28,0:24:53.84:0,54,541	0/0:25,0:25:60.12:0,60,607	1/1:7,9:15:38.77:419,39,0	1/1:6,5:11:26.52:278,27,0	0/0:20,0:19:21.23:0,21,331	0/0:15,0:15:14.93:0,15,125	0/0:18,0:18:22.89:0,23,229	0/0:29,0:26:69.65:0,70,689	0/1:23,0:22:8.07:8,0,362	0/0:23,0:17:45.05:0,45,437	0/0:28,0:28:78.10:0,78,776	0/0:9,0:9:24.05:0,24,245	1/1:8,7:15:36.58:348,37,0	1/1:7,10:15:33.95:387,34,0	1/1:8,8:15:30.05:355,30,0	0/0:28,0:26:39.55:0,40,393	0/0:37,0:36:86.47:0,86,914	0/0:19,0:19:42.08:0,42,424	0/0:10,0:9:20.64:0,21,194
chr10	78248642	.	TTTTTTG	T	2799.21	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-5.047;DP=559;FS=4.731;HRun=0;HaplotypeScore=136.8128;InbreedingCoeff=0.9258;MQ=59.31;MQ0=22;MQRankSum=-1.949;QD=34.14;ReadPosRankSum=-1.129;VQSLOD=3.0789;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:52.91:0,53,1618	0/0:10,0:10:18.06:0,18,460	0/0:12,0:9:10.21:0,10,79	0/1:8,0:3:0.63:9,0,1	0/0:26,0:26:60.19:0,60,1312	0/0:28,0:27:25.62:0,26,399	0/0:10,0:10:18.06:0,18,408	0/0:37,0:34:87.09:0,87,1165	0/0:15,0:13:24.18:0,24,546	0/0:29,0:25:55.34:0,55,1282	0/0:24,0:24:60.18:0,60,1295	1/1:14,2:15:42.13:710,42,0	1/1:10,1:11:30.10:475,30,0	0/0:20,0:19:44.03:0,44,1165	0/0:14,0:14:14.07:0,14,218	0/0:18,0:18:35.70:0,36,705	0/0:30,0:27:61.40:0,61,1667	0/0:22,0:22:32.26:0,32,835	0/0:23,0:17:45.10:0,45,885	0/0:27,0:27:77.84:0,78,1548	0/0:9,0:9:24.08:0,24,553	1/1:9,6:15:39.13:643,39,0	1/1:14,3:15:36.12:681,36,0	1/1:14,1:14:30.06:458,30,0	0/0:29,0:27:45.14:0,45,799	0/0:37,0:36:99:0,99,2329	0/0:19,0:19:48.15:0,48,1021	0/0:10,0:9:21.06:0,21,441
chr10	78248668	.	T	TTG	3652.87	PASS	AB=0.987;AC=30;AF=0.536;AN=56;BaseQRankSum=-3.711;DP=604;FS=25.579;HRun=0;HaplotypeScore=98.0743;InbreedingCoeff=-0.3057;MQ=49.65;MQ0=28;MQRankSum=1.657;QD=7.04;ReadPosRankSum=0.032;VQSLOD=1.4193;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:60.30:0,60,510	0/1:13,0:11:6.98:68,0,7	0/0:17,0:2:5.16:0,5,25	0/0:15,0:2:1.25:0,1,3	0/1:29,0:29:22.25:220,0,22	0/1:33,1:32:5.13:130,0,5	0/1:15,0:15:48.98:117,0,49	0/1:33,0:30:99:205,0,120	0/1:17,0:15:22.54:97,0,23	1/1:32,0:27:41.39:393,41,0	0/1:21,1:21:39.11:137,0,39	0/1:14,0:13:32.52:40,0,33	0/1:13,0:12:34.68:35,0,38	1/1:22,0:21:3.13:222,3,0	0/1:20,0:20:20.22:33,0,20	1/1:24,0:22:13.53:147,14,0	0/1:32,0:28:12.98:406,0,13	0/0:24,0:22:50.98:0,51,489	0/1:33,0:28:91.93:237,0,92	0/1:23,0:23:35.58:217,0,36	1/1:8,0:8:19.42:135,19,0	0/1:12,0:12:10.89:94,0,11	0/1:14,0:12:24.65:80,0,25	1/1:14,0:12:19.87:99,20,0	1/1:14,9:22:6.66:165,7,0	0/1:36,0:36:99:104,0,143	0/1:25,0:25:1.58:239,0,2	0/1:7,0:7:6.17:34,0,6
chr10	78248669	.	T	TG	3928.95	PASS	AB=0.858;AC=31;AF=0.554;AN=56;BaseQRankSum=-4.244;DP=606;FS=27.473;HRun=0;HaplotypeScore=88.3733;InbreedingCoeff=-0.2685;MQ=49.66;MQ0=28;MQRankSum=2.588;QD=7.56;ReadPosRankSum=0.566;VQSLOD=1.6921;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:65.94:0,66,524	0/1:5,7:10:5.89:64,0,6	0/0:18,0:2:5.83:0,6,36	0/0:15,0:2:2.74:0,3,12	0/1:8,20:29:27.48:225,0,27	0/1:33,0:31:33.60:34,0,51	0/1:15,0:15:54.25:113,0,54	0/1:34,0:31:94.88:205,0,95	0/1:17,0:15:49.50:50,0,60	1/1:7,23:26:51.16:464,51,0	0/1:10,14:23:14.81:175,0,15	0/1:5,9:13:1.65:110,0,2	0/1:4,9:12:23.68:119,0,24	1/1:21,1:21:12.77:212,13,0	0/1:5,12:19:9.74:63,0,10	0/1:24,0:22:27.78:62,0,28	0/1:31,1:28:35.12:286,0,35	0/0:24,0:22:58.73:0,59,474	0/1:34,0:29:73.95:246,0,74	0/1:23,0:23:16.64:250,0,17	1/1:8,0:8:20.45:146,20,0	1/1:7,5:12:4.06:235,4,0	1/1:6,8:12:2.90:151,3,0	1/1:3,11:12:21.01:207,21,0	0/1:25,0:23:14.76:81,0,15	0/1:38,0:36:99:131,0,155	1/1:25,0:25:10.34:259,10,0	0/1:8,0:7:11.53:41,0,12
chr10	78249218	.	GAA	G	800.84	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.916;DP=672;FS=10.571;HRun=2;HaplotypeScore=81.3497;InbreedingCoeff=0.9996;MQ=84.26;MQ0=0;MQRankSum=-2.394;QD=30.80;ReadPosRankSum=1.060;VQSLOD=2.4877;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,2805	0/0:13,0:13:39.12:0,39,730	0/0:15,0:15:35.31:0,35,745	0/0:27,0:27:59.95:0,60,1335	0/0:28,0:28:84.23:0,84,1594	0/0:26,0:26:75.25:0,75,1478	0/0:28,0:28:84.27:0,84,1670	0/0:40,0:40:99:0,117,2244	0/0:17,0:17:51.16:0,51,1000	0/0:19,0:19:55.74:0,56,1102	0/0:17,0:17:51.17:0,51,1017	0/0:29,0:29:87.30:0,87,1744	0/0:30,0:30:90.31:0,90,1826	0/0:23,0:23:69.24:0,69,1400	0/0:37,0:37:99:0,111,2200	0/0:17,0:17:51.18:0,51,1036	0/0:38,0:38:99:0,114,2251	0/0:29,0:29:87.30:0,87,1750	0/0:19,0:19:57.20:0,57,1152	0/0:17,0:17:51.18:0,51,1028	0/0:27,0:27:81.26:0,81,1609	0/0:19,0:19:57.20:0,57,1141	0/0:15,0:15:45.15:0,45,913	0/0:31,0:31:90.29:0,90,1770	0/0:19,0:19:54.19:0,54,1084	1/1:0,15:16:48.12:594,48,0	0/0:18,0:18:54.17:0,54,1046	1/1:1,9:10:30.03:329,30,0
chr10	78249221	.	C	CT	780.98	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.753;DP=673;FS=12.686;HRun=0;HaplotypeScore=70.0470;InbreedingCoeff=0.9994;MQ=84.74;MQ0=0;MQRankSum=-1.853;QD=28.93;ReadPosRankSum=1.271;VQSLOD=2.8018;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1838	0/0:13,0:13:39.13:0,39,544	0/0:14,0:14:30.13:0,30,518	0/0:29,0:29:69.96:0,70,1028	0/0:27,0:27:81.27:0,81,1127	0/0:25,0:25:75.25:0,75,1048	0/0:30,0:30:90.29:0,90,1240	0/0:39,0:39:99:0,114,1593	0/0:16,0:16:48.15:0,48,654	0/0:20,0:20:57.17:0,57,779	0/0:17,0:17:51.17:0,51,713	0/0:29,0:29:84.26:0,84,1141	0/0:33,0:33:96.31:0,96,1322	0/0:24,0:24:69.22:0,69,948	0/0:36,0:36:99:0,108,1494	0/0:17,0:17:51.17:0,51,713	0/0:35,0:35:99:0,105,1416	0/0:29,0:29:84.26:0,84,1157	0/0:23,0:23:66.21:0,66,904	0/0:16,0:16:48.15:0,48,656	0/0:28,0:28:81.26:0,81,1117	0/0:19,0:19:57.19:0,57,797	0/0:15,0:15:45.15:0,45,625	0/0:30,0:30:87.26:0,87,1197	0/0:20,0:20:57.18:0,57,781	1/1:1,15:16:46.66:558,47,0	0/0:17,0:17:51.16:0,51,696	1/1:2,9:11:30.08:345,30,0
chr10	78250190	.	C	CT	4142.69	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-13.372;DP=712;FS=5.172;HRun=7;HaplotypeScore=89.2660;InbreedingCoeff=0.9996;MQ=73.39;MQ0=0;MQRankSum=-1.085;QD=29.80;ReadPosRankSum=1.381;VQSLOD=3.8679;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1151	0/0:10,0:10:30.05:0,30,289	0/0:22,0:22:52.30:0,52,490	0/0:14,0:14:26.81:0,27,233	0/0:17,0:17:45.07:0,45,435	0/0:21,0:21:60.09:0,60,579	0/0:27,0:28:74.13:0,74,694	0/0:29,0:30:77.14:0,77,727	0/0:22,0:22:57.08:0,57,550	0/0:24,0:24:66.10:0,66,637	0/0:17,0:17:45.06:0,45,430	1/1:1,30:31:81.25:979,81,0	1/1:2,34:36:96.28:1149,96,0	0/0:35,0:35:93.11:0,93,890	0/0:32,0:32:87.13:0,87,840	0/0:34,0:34:96.15:0,96,927	0/0:31,0:31:84.13:0,84,811	0/0:17,0:16:42.06:0,42,402	0/0:19,0:19:51.08:0,51,492	0/0:22,0:22:51.07:0,51,491	0/0:37,0:37:81.29:0,81,932	1/1:0,18:18:45.14:539,45,0	1/1:3,18:21:38.93:461,39,0	1/1:5,28:33:84.26:1015,84,0	0/0:33,0:33:87.11:0,87,833	0/0:29,0:29:75.12:0,75,724	0/0:25,0:25:72.07:0,72,685	0/0:13,0:13:39.06:0,39,376
chr10	78250696	.	C	CTGTTGTTGT	13840.63	PASS	AB=0.581;AC=22;AF=0.393;AN=56;BaseQRankSum=-9.385;DP=726;FS=5.969;HRun=0;HaplotypeScore=211.9950;InbreedingCoeff=0.8476;MQ=69.26;MQ0=1;MQRankSum=-15.127;QD=45.23;ReadPosRankSum=-5.153;VQSLOD=3.1690;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:16.72:0,17,2281	0/0:13,0:13:30.10:0,30,841	0/0:23,0:21:15.05:0,15,373	0/0:29,0:26:47.82:0,48,1225	0/0:18,0:18:33.11:0,33,904	1/1:17,10:30:48.16:1879,48,0	1/1:11,6:18:21.07:732,21,0	0/0:34,0:34:42.13:0,42,1020	1/1:14,9:23:42.14:1694,42,0	0/0:28,0:28:57.18:0,57,1457	0/0:14,0:15:36.12:0,36,995	0/0:14,0:35:22.33:0,22,137	0/0:13,0:33:17.50:0,18,48	0/0:24,0:25:42.13:0,42,1086	0/0:40,0:41:99:0,99,2695	1/1:16,17:33:48.16:2199,48,0	1/1:13,5:20:24.08:984,24,0	0/0:22,0:23:46.04:0,46,1255	1/1:17,2:20:27.08:972,27,0	1/1:14,8:22:30.57:1222,31,0	1/1:18,7:27:22.32:875,22,0	0/1:7,0:24:15.33:20,0,15	0/0:6,0:19:10.94:0,11,29	0/1:10,0:38:9.71:10,0,112	1/1:16,13:29:48.16:1932,48,0	0/0:19,0:20:45.15:0,45,1240	1/1:11,8:22:30.10:1322,30,0	0/0:18,0:19:48.16:0,48,1288
chr10	78250796	.	A	AAAAC	7447.39	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-6.330;DP=780;FS=0.000;HRun=0;HaplotypeScore=147.3312;InbreedingCoeff=0.9984;MQ=64.55;MQ0=0;MQRankSum=-3.083;QD=49.32;ReadPosRankSum=-0.078;VQSLOD=4.9435;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:93.17:0,93,1451	0/0:15,0:15:45.15:0,45,753	0/0:19,0:18:37.93:0,38,565	0/0:25,0:24:48.09:0,48,722	0/0:44,0:44:93.29:0,93,1500	1/1:9,20:31:60.20:1422,60,0	1/1:8,8:17:24.08:590,24,0	0/0:11,0:34:53.27:0,53,486	1/1:4,12:16:33.11:792,33,0	0/0:38,0:38:99:0,102,1658	0/0:27,0:28:75.20:0,75,1154	0/0:35,0:35:93.30:0,93,1505	0/0:33,0:33:81.28:0,81,1355	0/0:30,0:30:63.20:0,63,1007	0/0:36,0:36:93.25:0,93,1499	1/1:6,19:25:45.15:1111,45,0	1/1:4,20:24:51.18:1259,51,0	0/0:20,0:20:45.15:0,45,753	0/0:19,0:19:30.10:0,30,502	0/0:38,0:38:87.25:0,87,1389	0/0:16,0:16:39.01:0,39,566	0/0:35,0:35:81.26:0,81,1303	0/0:28,0:28:72.16:0,72,1097	0/0:24,0:24:28.27:0,28,825	1/1:5,33:37:93.32:2272,93,0	0/0:31,0:31:78.27:0,78,1302	0/0:28,0:28:63.18:0,63,1001	0/0:12,0:12:21.03:0,21,297
chr10	78251350	.	G	GA	5031.39	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-5.142;DP=600;FS=18.971;HRun=9;HaplotypeScore=69.8052;InbreedingCoeff=0.9940;MQ=80.83;MQ0=0;MQRankSum=0.235;QD=21.23;ReadPosRankSum=2.623;VQSLOD=3.7047;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:86.96:0,87,755	0/0:11,0:11:29.99:0,30,258	0/0:22,0:20:23.05:0,23,249	0/0:13,0:13:20.02:0,20,161	0/0:27,1:28:35.80:0,36,540	1/1:1,10:12:29.91:313,30,0	1/1:4,10:14:24.06:266,24,0	0/0:5,0:37:60.01:0,60,178	1/1:1,12:14:29.91:313,30,0	0/0:27,0:27:68.96:0,69,599	0/0:20,0:20:56.99:0,57,494	0/0:25,0:25:58.74:0,59,511	0/0:19,0:21:49.03:0,49,399	0/0:23,0:23:53.96:0,54,465	0/0:25,0:25:65.98:0,66,573	1/1:3,20:23:34.11:605,34,0	1/1:2,24:26:72.19:796,72,0	0/0:15,0:15:41.94:0,42,355	1/1:28,0:28:66.49:358,66,0	1/1:35,0:35:82.57:526,83,0	1/1:15,0:15:41.21:253,41,0	0/0:30,0:30:71.96:0,72,625	0/0:20,0:20:50.97:0,51,442	0/0:14,0:14:35.99:0,36,313	1/1:2,15:17:36.10:398,36,0	1/1:4,24:28:49.15:770,49,0	1/1:20,0:20:50.12:314,50,0	1/1:2,3:5:12:120,12,0
chr10	78251354	.	A	AG	4036.18	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=-1.904;DP=586;FS=24.708;HRun=0;HaplotypeScore=70.5978;InbreedingCoeff=0.4565;MQ=79.41;MQ0=0;MQRankSum=-1.185;QD=17.03;ReadPosRankSum=4.202;VQSLOD=2.8466;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.29:0,93,1267	0/0:10,0:10:30.10:0,30,419	0/0:19,0:16:40.77:0,41,465	0/0:14,0:14:29.96:0,30,334	0/0:25,0:25:68.02:0,68,958	0/1:12,0:12:20.53:31,0,21	0/1:13,0:13:19.61:20,0,51	0/0:34,0:34:99:0,100,642	0/1:16,0:16:31.17:31,0,67	0/0:31,0:31:87.26:0,87,1127	0/0:19,0:19:57.19:0,57,795	0/0:24,0:24:72.20:0,72,942	0/0:20,0:20:57.03:0,57,715	0/0:23,0:23:66.18:0,66,859	0/0:23,0:23:69.22:0,69,947	0/1:23,0:23:51.58:57,0,52	1/1:26,0:26:3:100,3,0	0/0:15,0:15:45.14:0,45,610	1/1:0,28:28:84.22:1111,84,0	1/1:0,32:32:90.16:1221,90,0	1/1:0,16:16:42.14:600,42,0	0/0:27,0:27:81.21:0,81,1076	0/0:19,0:19:57.17:0,57,766	0/0:15,0:15:36.12:0,36,503	1/1:16,0:16:3.27:42,3,0	0/1:30,0:30:85.93:86,0,89	1/1:0,20:20:51.17:729,51,0	0/1:5,0:5:7.44:7,0,21
chr10	78251835	.	T	TA	4512.78	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-9.452;DP=698;FS=2.402;HRun=9;HaplotypeScore=83.0001;InbreedingCoeff=0.9876;MQ=73.61;MQ0=0;MQRankSum=1.151;QD=23.38;ReadPosRankSum=-0.478;VQSLOD=5.3249;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,911	0/0:12,0:12:32.99:0,33,287	0/0:19,0:19:28.61:0,29,251	0/0:12,0:12:17.96:0,18,156	0/0:22,0:22:56.97:0,57,495	0/0:21,0:21:56.97:0,57,491	0/0:28,0:28:77.91:0,78,666	1/1:2,21:23:63.17:697,63,0	0/0:25,0:25:59.94:0,60,517	0/0:28,0:30:63.97:0,64,520	0/0:26,1:27:38.78:0,39,563	1/1:2,28:30:78.21:861,78,0	1/1:4,37:41:99:1128,102,0	0/0:24,0:24:59.96:0,60,521	0/0:26,0:26:65.97:0,66,573	0/0:30,0:30:89.95:0,90,773	0/0:29,0:29:43.19:0,43,613	0/0:18,0:18:44.99:0,45,391	0/0:24,0:24:65.95:0,66,567	0/0:33,0:33:71.56:0,72,625	0/0:24,0:24:59.96:0,60,518	1/1:4,19:23:57.06:602,57,0	1/1:5,13:18:10.53:340,11,0	1/1:2,14:16:39.11:431,39,0	0/0:29,0:28:69.81:0,70,587	1/1:7,5:32:23.04:382,23,0	0/0:33,0:34:91.99:0,92,784	1/1:3,0:9:14.20:71,14,0
chr10	78252699	.	GT	G	1451.94	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.907;DP=601;FS=2.327;HRun=10;HaplotypeScore=78.7250;InbreedingCoeff=0.9968;MQ=76.04;MQ0=3;MQRankSum=0.207;QD=17.93;ReadPosRankSum=0.663;VQSLOD=4.4044;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:28:52.08:0,52,769	0/0:11,0:11:33.07:0,33,348	0/0:25,0:21:39.52:0,40,403	0/0:13,0:10:17.63:0,18,164	0/0:29,0:29:69.18:0,69,756	0/0:30,0:30:84.21:0,84,919	0/0:18,0:18:48.13:0,48,531	0/0:34,0:34:81.05:0,81,877	0/0:14,0:14:36.10:0,36,398	0/0:29,0:31:74.99:0,75,790	0/0:25,1:26:35:0,35,606	0/0:24,0:24:45.12:0,45,498	0/0:18,0:18:54.09:0,54,570	0/0:12,0:12:33.09:0,33,365	0/0:25,0:26:63:0,63,678	0/0:17,0:18:44.95:0,45,479	0/0:27,1:28:45.91:0,46,684	0/0:14,0:13:36.57:0,37,399	1/1:6,16:22:44.95:383,45,0	1/1:1,12:13:35.99:313,36,0	1/1:2,14:16:35.99:312,36,0	0/0:22,0:22:56.26:0,56,629	0/0:17,0:17:39.08:0,39,415	0/0:13,0:13:27.07:0,27,299	0/0:26,0:26:72.17:0,72,780	0/0:21,2:24:34.11:0,34,605	1/1:4,25:30:71:605,71,0	0/0:17,0:17:48.06:0,48,499
chr10	78252972	.	GT	G	9189.32	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.489;DP=438;FS=0.569;HRun=8;HaplotypeScore=50.2775;InbreedingCoeff=0.9640;MQ=77.73;MQ0=0;MQRankSum=-1.688;QD=24.97;ReadPosRankSum=1.360;VQSLOD=5.4415;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,1268	1/1:0,4:4:12.02:116,12,0	0/0:19,0:16:11.39:0,11,208	0/0:13,0:10:14.40:0,14,135	1/1:0,15:15:42:393,42,0	1/1:0,12:12:36.06:348,36,0	1/1:0,8:8:21.03:203,21,0	1/1:4,21:25:63.08:603,63,0	1/1:3,19:22:47.89:463,48,0	1/1:0,14:14:42.05:399,42,0	1/1:1,22:23:66.10:633,66,0	1/1:0,13:14:38.10:354,38,0	1/1:1,10:11:27.04:261,27,0	1/1:1,12:13:36.06:348,36,0	1/1:0,15:15:39.06:377,39,0	1/1:0,13:13:30.05:290,30,0	1/1:1,17:18:45.07:435,45,0	1/1:0,11:11:30.05:290,30,0	1/1:2,9:11:27.04:261,27,0	1/1:1,18:19:51.07:492,51,0	1/1:0,8:8:24.04:232,24,0	1/1:1,7:8:21.03:203,21,0	1/1:1,10:11:27.04:261,27,0	1/1:0,10:10:30.05:290,30,0	1/1:2,21:23:54.08:521,54,0	1/1:4,22:26:66.10:637,66,0	1/1:1,19:20:50.93:492,51,0	1/1:1,13:14:30.05:290,30,0
chr10	78253183	.	AC	A	4186.90	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=7.025;DP=524;FS=12.550;HRun=5;HaplotypeScore=58.4495;InbreedingCoeff=0.9468;MQ=74.51;MQ0=0;MQRankSum=-1.237;QD=25.07;ReadPosRankSum=3.269;VQSLOD=2.3523;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.29:0,96,1269	0/0:2,0:2:3:0,3,27	0/0:23,0:21:53.71:0,54,627	0/0:17,0:16:19:0,19,357	0/0:16,0:16:39.13:0,39,523	0/0:24,0:24:66.22:0,66,898	0/0:21,0:21:62.41:0,62,809	0/0:24,0:24:43.37:0,43,579	0/0:31,0:31:87.29:0,87,1186	0/0:12,0:12:33.11:0,33,447	0/0:11,0:11:27.09:0,27,367	1/1:1,23:24:54.15:612,54,0	1/1:3,16:19:4.09:434,4,0	0/0:20,0:20:60.18:0,60,803	0/0:20,0:20:60.19:0,60,804	0/0:12,0:12:36.11:0,36,474	0/0:29,0:29:87.28:0,87,1171	0/0:23,0:23:66.21:0,66,886	1/1:1,15:16:42.05:459,42,0	1/1:3,9:12:24.07:268,24,0	1/1:2,22:24:51.15:579,51,0	1/1:2,11:13:30.06:340,30,0	1/1:6,11:17:33.09:373,33,0	1/1:0,15:15:36.10:408,36,0	0/0:14,0:14:36.11:0,36,477	0/0:18,0:18:33.11:0,33,449	1/1:3,24:27:63.18:714,63,0	0/0:6,0:6:18.05:0,18,226
chr10	78256861	.	T	TAA	14366.81	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-0.899;DP=705;FS=4.399;HRun=11;HaplotypeScore=109.9419;InbreedingCoeff=0.8804;MQ=68.60;MQ0=1;MQRankSum=-1.968;QD=22.95;ReadPosRankSum=2.714;VQSLOD=4.5157;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.06:0,81,780	1/1:2,5:8:18.05:241,18,0	0/0:16,0:13:10.22:0,10,138	0/1:21,0:16:2.52:3,0,121	1/1:6,29:38:63.62:1200,64,0	1/1:5,19:25:53.66:732,54,0	1/1:5,21:28:26.63:699,27,0	0/0:29,0:31:80.59:0,81,751	1/1:3,22:26:28.14:753,28,0	1/1:17,19:38:60.10:780,60,0	1/1:7,19:26:48.16:675,48,0	1/1:6,20:28:51.70:673,52,0	1/1:7,0:20:27.03:257,27,0	1/1:4,18:24:50.14:669,50,0	1/1:5,17:25:53.15:698,53,0	1/1:5,16:22:49.40:683,49,0	1/1:3,22:26:54.06:782,54,0	1/1:6,0:25:48.04:449,48,0	1/1:15,0:31:55.93:504,56,0	1/1:14,1:34:66.71:635,67,0	1/1:2,0:11:21.92:203,22,0	1/1:2,2:22:51.02:493,51,0	1/1:4,3:23:39.07:431,39,0	1/1:2,0:19:45.07:429,45,0	1/1:4,26:33:75.07:1019,75,0	1/1:13,1:30:66.13:685,66,0	1/1:15,0:29:47.57:446,48,0	1/1:3,0:14:24.04:230,24,0
chr10	78257160	.	GA	G	1077.23	PASS	AB=0.957;AC=11;AF=0.196;AN=56;BaseQRankSum=2.413;DP=548;FS=3.327;HRun=10;HaplotypeScore=100.0081;InbreedingCoeff=0.8413;MQ=70.08;MQ0=0;MQRankSum=0.131;QD=12.82;ReadPosRankSum=1.060;VQSLOD=3.6941;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:30.07:0,30,324	0/0:9,0:9:21.05:0,21,225	0/1:21,1:19:30.47:30,0,233	0/0:17,0:13:2.89:0,3,175	0/0:28,0:28:75.20:0,75,828	0/0:22,0:22:59.01:0,59,376	0/0:11,0:11:29.35:0,29,183	0/0:40,0:42:99:0,105,1131	0/0:20,0:20:55.89:0,56,340	0/0:29,0:30:81.04:0,81,865	0/0:21,1:22:31.10:0,31,571	1/1:1,12:13:26.99:234,27,0	1/1:1,13:14:38.99:338,39,0	0/0:8,0:8:20.09:0,20,206	0/0:30,0:30:78.20:0,78,854	0/0:24,0:24:64.81:0,65,407	0/0:18,0:18:44.33:0,44,293	0/0:29,0:27:63.17:0,63,697	0/0:24,0:26:56.82:0,57,592	0/0:17,0:20:50.79:0,51,518	0/0:9,0:9:21.02:0,21,219	1/1:2,10:12:26.99:234,27,0	1/1:5,12:17:35.99:312,36,0	1/1:1,5:6:12:104,12,0	0/0:14,0:14:29.42:0,29,183	0/0:3,0:23:63.22:0,63,357	0/0:31,0:31:72.18:0,72,789	0/0:2,0:18:39.80:0,40,199
chr10	78257485	.	CATAT	C	3123.40	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.795;DP=406;FS=1.741;HRun=0;HaplotypeScore=72.1605;InbreedingCoeff=0.8789;MQ=60.65;MQ0=1;MQRankSum=-1.458;QD=31.23;ReadPosRankSum=3.752;VQSLOD=3.2954;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.22:0,63,1571	0/0:7,0:7:21.07:0,21,511	0/0:3,0:1:3.01:0,3,67	0/0:5,0:4:0:0,0,1	0/0:29,0:29:72.25:0,72,1809	1/1:2,21:23:45.15:788,45,0	1/1:0,10:10:24.08:420,24,0	0/0:28,0:28:72.24:0,72,1763	1/1:2,15:17:30.10:526,30,0	0/0:22,0:22:48.16:0,48,1226	0/0:22,0:22:57.20:0,57,1423	0/0:8,0:8:18.06:0,18,460	0/0:12,0:12:24.08:0,24,607	0/0:11,0:11:27.08:0,27,620	0/0:15,0:15:39.12:0,39,910	1/1:5,15:20:33.11:577,33,0	1/1:2,17:19:39.13:679,39,0	0/0:19,0:19:42.14:0,42,988	0/0:3,0:9:18.06:0,18,311	0/0:5,0:15:36.11:0,36,633	0/0:5,0:9:11.92:0,12,213	0/0:4,0:4:9.03:0,9,203	0/0:10,0:10:21.06:0,21,444	0/0:2,0:2:3.01:0,3,77	1/1:2,9:11:18.06:315,18,0	0/0:3,0:18:42.14:0,42,725	0/0:4,0:14:30.10:0,30,556	0/0:5,0:20:33.11:0,33,587
chr10	78257739	.	GCTCATGAGTAGT	G	481.52	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.654;DP=633;FS=0.000;HRun=0;HaplotypeScore=207.7102;InbreedingCoeff=0.9784;MQ=84.29;MQ0=0;MQRankSum=-3.850;QD=53.50;ReadPosRankSum=0.903;VQSLOD=3.1952;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.25:0,72,4325	0/0:8,0:8:21.04:0,21,980	0/0:15,0:15:45.15:0,45,2074	0/0:23,0:23:66.20:0,66,3304	0/0:17,0:17:51.13:0,51,2678	0/0:27,0:27:81.28:0,81,4874	0/0:23,0:23:69.21:0,69,3704	0/0:40,0:40:99:0,117,6431	0/0:21,0:21:63.19:0,63,3300	0/0:25,0:25:72.23:0,72,3793	0/0:30,0:30:90.29:0,90,5132	0/0:27,0:27:78.20:0,78,3952	0/0:27,0:27:81.26:0,81,4431	0/0:26,0:26:72.25:0,72,4346	0/0:33,0:33:96.32:0,96,5699	0/0:32,0:31:96.32:0,96,5652	0/0:23,0:23:69.24:0,69,4058	1/1:1,8:9:15.05:570,15,0	0/0:23,0:23:66.20:0,66,3314	0/0:14,0:14:39.12:0,39,2259	0/0:37,0:37:99:0,105,6064	0/0:13,0:13:39.12:0,39,2203	0/0:9,0:9:27.09:0,27,1675	0/0:26,0:26:78.27:0,78,4665	0/0:19,0:19:57.17:0,57,3181	0/0:31,0:31:93.29:0,93,5164	0/0:21,0:21:63.22:0,63,3729	0/0:10,0:10:30.10:0,30,1861
chr10	78257976	.	GT	G	12170.45	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=2.742;DP=574;FS=7.674;HRun=8;HaplotypeScore=86.4978;InbreedingCoeff=0.9964;MQ=72.12;MQ0=0;MQRankSum=-1.185;QD=24.24;ReadPosRankSum=2.744;VQSLOD=5.4307;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.14:0,51,602	1/1:0,8:8:24.04:232,24,0	0/0:11,0:11:24.07:0,24,277	0/0:12,0:10:17.93:0,18,193	1/1:4,27:31:78.08:745,78,0	1/1:1,25:26:69.11:666,69,0	1/1:1,18:19:48.08:464,48,0	1/1:6,24:30:72.07:681,72,0	1/1:3,20:23:51.08:493,51,0	1/1:2,28:30:84.11:802,84,0	1/1:0,23:23:66.10:637,66,0	1/1:3,17:20:45.07:435,45,0	1/1:2,21:23:57.09:550,57,0	1/1:1,13:14:30.04:290,30,0	1/1:6,23:29:60.09:579,60,0	1/1:2,24:26:66.10:637,66,0	1/1:2,17:19:54.96:517,55,0	1/1:4,18:22:35.27:499,35,0	1/1:4,15:19:45.07:435,45,0	1/1:1,26:27:77.86:722,78,0	1/1:0,17:17:51.08:492,51,0	1/1:2,22:24:60.10:579,60,0	1/1:1,12:14:38.09:353,38,0	1/1:0,13:13:33.05:319,33,0	1/1:0,25:25:57.09:550,57,0	0/0:23,0:23:63.19:0,63,752	1/1:1,19:20:51.08:492,51,0	0/0:8,0:8:24.07:0,24,288
chr10	78258647	.	GTT	G	7032.90	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-8.735;DP=587;FS=1.072;HRun=10;HaplotypeScore=103.1495;InbreedingCoeff=0.9993;MQ=79.31;MQ0=2;MQRankSum=-0.192;QD=28.59;ReadPosRankSum=4.695;VQSLOD=5.0141;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,111,1758	0/0:2,0:12:27.04:0,27,260	0/0:28,0:24:45.75:0,46,659	0/0:16,0:16:32.12:0,32,396	0/0:4,0:29:78.37:0,78,746	1/1:1,16:17:42.11:468,42,0	1/1:2,13:15:36.09:401,36,0	0/0:29,0:30:77.75:0,78,1194	1/1:0,16:15:39.11:435,39,0	0/0:8,0:23:63.54:0,64,584	0/0:5,0:22:63.05:0,63,632	0/0:5,0:26:47.59:0,48,166	0/0:4,0:22:45.16:0,45,191	0/0:3,0:23:57.08:0,57,557	0/0:3,0:20:54.06:0,54,552	1/1:1,22:23:66.18:736,66,0	1/1:3,23:25:63.16:702,63,0	1/1:1,12:13:36.10:401,36,0	1/1:3,20:23:60.14:658,60,0	1/1:1,24:25:66.15:734,66,0	1/1:1,8:9:27.05:290,27,0	0/0:3,0:17:32.44:0,32,112	0/0:2,0:17:39.18:0,39,148	0/0:2,0:12:24.95:0,25,86	1/1:2,21:23:63.16:702,63,0	1/1:5,17:22:48.12:535,48,0	1/1:2,19:21:54.14:602,54,0	1/1:0,13:13:33.09:368,33,0
chr10	78258801	.	G	GT	2128.45	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-6.327;DP=548;FS=0.468;HRun=9;HaplotypeScore=65.7485;InbreedingCoeff=0.9979;MQ=76.57;MQ0=0;MQRankSum=0.201;QD=21.94;ReadPosRankSum=0.558;VQSLOD=4.4047;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:56.92:0,57,482	0/0:14,0:14:29.96:0,30,256	0/0:13,0:14:27.39:0,27,223	0/0:9,0:9:19.81:0,20,160	0/0:12,0:12:32.99:0,33,287	0/0:24,0:24:59.90:0,60,513	0/0:19,0:19:50.97:0,51,443	0/0:30,0:30:65.95:0,66,565	0/0:14,0:14:35.97:0,36,309	0/0:26,0:26:65.98:0,66,573	0/0:24,0:24:59.96:0,60,517	1/1:7,11:18:41.89:424,42,0	1/1:2,17:19:42.11:465,42,0	0/0:20,0:20:53.99:0,54,469	0/0:19,0:19:50.99:0,51,443	0/0:17,0:17:41.98:0,42,365	0/0:21,0:21:59.97:0,60,517	0/0:12,0:12:32.98:0,33,286	0/0:20,0:20:47.96:0,48,410	0/0:32,0:32:80.95:0,81,699	0/0:13,0:13:32.98:0,33,287	1/1:6,13:20:41.95:446,42,0	1/1:2,25:27:40.01:671,40,0	1/1:3,10:13:27.07:299,27,0	0/0:21,0:21:47.96:0,48,411	0/0:20,0:20:47.96:0,48,414	0/0:31,0:30:92.97:0,93,803	0/0:17,0:17:47.97:0,48,412
chr10	78259794	.	TG	T	118.48	PASS	AB=0.865;AC=3;AF=0.054;AN=56;BaseQRankSum=6.061;DP=373;FS=5.967;HRun=1;HaplotypeScore=62.8263;InbreedingCoeff=-0.0701;MQ=62.69;MQ0=0;MQRankSum=-5.859;QD=3.12;ReadPosRankSum=-1.261;VQSLOD=-0.6485;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:36.12:0,36,575	0/0:9,0:9:27.09:0,27,432	0/0:4,0:3:5.94:0,6,41	0/0:9,0:6:11.99:0,12,134	0/0:15,0:15:39.13:0,39,618	0/0:3,1:4:8.98:0,9,143	0/0:7,0:7:21.06:0,21,313	0/0:41,0:41:99:0,123,1965	0/0:6,0:6:18.06:0,18,288	0/0:14,0:14:42.14:0,42,685	0/0:20,0:20:54.64:0,55,851	0/0:13,0:13:39.12:0,39,601	0/0:16,0:16:48.15:0,48,744	0/0:13,0:13:39.13:0,39,623	0/0:6,0:6:18.06:0,18,287	0/0:4,0:4:6.94:0,7,140	0/1:9,0:12:21.54:22,0,190	0/0:15,0:15:45.15:0,45,719	0/0:21,0:21:57.19:0,57,911	0/0:26,0:26:78.25:0,78,1222	0/0:15,0:15:45.15:0,45,719	0/0:8,0:8:24.08:0,24,384	0/0:16,0:16:48.14:0,48,741	0/0:4,0:4:12.04:0,12,192	0/1:7,1:10:47.89:48,0,262	0/0:5,1:6:15:0,15,240	0/0:31,0:31:93.32:0,93,1487	0/1:11,5:16:99:148,0,439
chr10	78259808	.	T	TA	992.51	PASS	AB=0.925;AC=11;AF=0.196;AN=56;BaseQRankSum=4.960;DP=340;FS=24.392;HRun=0;HaplotypeScore=59.6673;InbreedingCoeff=0.3576;MQ=60.72;MQ0=0;MQRankSum=-4.667;QD=16.01;ReadPosRankSum=-1.761;VQSLOD=2.4008;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.13:0,39,534	0/0:8,0:8:24.08:0,24,318	0/0:2,0:2:5.93:0,6,47	0/0:8,0:5:2.77:0,3,22	0/0:12,0:12:35.92:0,36,424	0/1:5,1:6:4.36:129,0,4	1/1:2,0:2:6.02:95,6,0	0/0:43,0:43:99:0,129,1763	0/1:4,0:4:8.89:75,0,9	0/0:11,0:11:33.09:0,33,438	0/0:15,0:15:44.78:0,45,519	0/0:10,0:10:30.09:0,30,404	0/0:13,0:13:39.09:0,39,510	0/0:11,0:11:33.10:0,33,425	0/0:5,0:5:15.04:0,15,189	1/1:3,0:3:9.03:132,9,0	0/1:10,0:10:14.99:104,0,15	0/0:16,0:16:45.14:0,45,611	0/0:18,0:18:51.17:0,51,713	0/0:23,0:23:60.19:0,60,824	0/0:15,0:15:45.13:0,45,598	0/0:7,0:7:21.06:0,21,277	0/0:15,0:15:45.15:0,45,629	0/0:2,0:2:6.02:0,6,84	0/1:10,0:10:64.48:152,0,64	1/1:6,1:7:4.98:216,5,0	0/0:31,0:31:93.30:0,93,1283	0/1:14,6:20:99:240,0,120
chr10	78259811	.	A	ATATAT	4666.84	PASS	AB=1.000;AC=25;AF=0.463;AN=54;BaseQRankSum=0.035;DP=346;FS=23.427;HRun=0;HaplotypeScore=79.7735;InbreedingCoeff=0.8427;MQ=62.15;MQ0=0;MQRankSum=-3.802;QD=36.75;ReadPosRankSum=-0.812;VQSLOD=2.2977;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.13:0,39,764	1/1:3,5:8:15.05:444,15,0	0/0:3,0:3:3:0,3,25	0/0:7,0:5:2.84:0,3,42	1/1:1,9:11:27.09:746,27,0	1/1:6,0:6:6.02:111,6,0	./.	0/0:44,0:44:78.26:0,78,1445	1/1:5,0:5:5.93:79,6,0	1/1:5,7:13:24.07:583,24,0	1/1:5,10:15:36.12:1016,36,0	0/0:9,0:9:24.08:0,24,470	0/0:13,0:13:33.10:0,33,612	1/1:6,5:11:15.05:444,15,0	1/1:2,3:6:6.02:178,6,0	0/1:3,0:3:0:0,0,0	1/1:10,0:10:9.50:146,10,0	0/0:17,0:17:42.14:0,42,789	0/0:18,0:18:48.16:0,48,931	0/0:22,0:22:60.21:0,60,1144	0/0:14,0:14:36.09:0,36,636	0/0:8,0:8:12.04:0,12,193	0/0:17,0:17:45.15:0,45,840	0/0:2,0:2:6.02:0,6,118	1/1:11,0:11:20.94:302,21,0	1/1:8,0:8:12.02:186,12,0	0/0:30,0:30:60.21:0,60,1168	1/1:20,0:20:42.62:432,43,0
chr10	78260548	.	AT	A	6932.25	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.942;DP=742;FS=4.372;HRun=6;HaplotypeScore=87.5221;InbreedingCoeff=0.9999;MQ=87.33;MQ0=0;MQRankSum=-3.400;QD=29.75;ReadPosRankSum=3.104;VQSLOD=5.4565;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1375	0/0:12,0:12:33.11:0,33,431	0/0:35,0:35:89.08:0,89,1156	0/0:17,0:17:48.13:0,48,602	0/0:23,0:23:66.21:0,66,867	1/1:0,28:28:72.18:774,72,0	1/1:0,22:22:57.14:613,57,0	0/0:37,0:37:96.31:0,96,1263	1/1:1,29:30:84.21:903,84,0	0/0:27,0:27:75.24:0,75,983	0/0:27,0:27:78.25:0,78,1014	0/0:28,0:28:72.23:0,72,947	0/0:24,0:24:66.21:0,66,868	0/0:30,0:30:81.26:0,81,1060	0/0:31,0:31:87.28:0,87,1144	1/1:3,35:38:99:1064,99,0	1/1:0,21:21:63.16:677,63,0	1/1:0,18:18:54.14:580,54,0	0/0:15,0:15:36.12:0,36,474	0/0:20,0:20:57.19:0,57,750	0/0:34,0:34:93.28:0,93,1193	0/0:29,0:29:87.28:0,87,1144	0/0:34,0:34:99:0,99,1289	0/0:23,0:23:66.17:0,66,847	1/1:0,21:21:63.16:677,63,0	1/1:2,35:37:99:1128,105,0	0/0:26,0:25:78.25:0,78,1022	1/1:2,16:18:48.12:516,48,0
chr10	78261222	.	AAT	A	442.08	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.106;DP=682;FS=6.516;HRun=0;HaplotypeScore=83.2853;InbreedingCoeff=0.9974;MQ=75.35;MQ0=0;MQRankSum=-4.262;QD=36.84;ReadPosRankSum=1.089;VQSLOD=5.6914;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,2870	0/0:8,0:8:24.07:0,24,453	0/0:13,0:13:38.98:0,39,662	0/0:23,0:23:57.16:0,57,1064	0/0:30,0:30:90.27:0,90,1690	0/0:23,0:23:57.20:0,57,1148	0/0:18,0:18:36.08:0,36,690	0/0:26,0:26:78.27:0,78,1558	0/0:26,0:26:54.15:0,54,1008	0/0:29,0:29:87.26:0,87,1675	0/0:24,0:24:72.25:0,72,1461	0/0:27,0:27:81.27:0,81,1577	0/0:29,0:29:87.27:0,87,1663	0/0:25,0:25:75.25:0,75,1489	0/0:32,0:32:96.32:0,96,1914	0/0:19,0:19:54.19:0,54,1096	0/0:22,0:22:54.17:0,54,1036	1/1:0,12:12:33.11:537,33,0	0/0:26,0:26:75.22:0,75,1405	0/0:26,0:26:78.26:0,78,1532	0/0:23,0:23:69.22:0,69,1326	0/0:23,0:23:69.24:0,69,1392	0/0:24,0:24:72.22:0,72,1355	0/0:35,0:34:99:0,105,2095	0/0:22,0:22:60.19:0,60,1129	0/0:30,0:30:87.30:0,87,1740	0/0:26,0:26:78.27:0,78,1545	0/0:12,0:12:36.12:0,36,709
chr10	78261269	.	T	TAGGCAGGC	8216.06	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-2.536;DP=673;FS=14.839;HRun=0;HaplotypeScore=159.4603;InbreedingCoeff=0.9758;MQ=61.27;MQ0=0;MQRankSum=-11.444;QD=42.13;ReadPosRankSum=-1.750;VQSLOD=3.6374;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:69.24:0,69,1698	0/0:10,0:10:21.07:0,21,493	0/0:27,0:21:25.93:0,26,510	0/0:26,0:24:8.14:0,8,587	0/0:20,0:20:30.09:0,30,721	1/1:7,16:24:30.10:1163,30,0	1/1:7,19:27:21.07:876,21,0	0/0:25,0:25:39.11:0,39,829	1/1:6,20:30:33.05:1268,33,0	0/0:25,0:25:54.17:0,54,1215	0/0:26,0:26:42.13:0,42,968	0/0:21,0:21:42.14:0,42,976	0/0:31,0:31:69.24:0,69,1746	0/0:27,0:27:60.21:0,60,1487	0/0:25,0:25:48.16:0,48,1223	1/1:14,7:21:41.92:1199,42,0	1/1:12,10:24:30.10:1251,30,0	1/1:11,1:12:25.31:525,25,0	0/0:25,0:25:24.08:0,24,620	0/0:19,0:19:42.14:0,42,1038	0/0:27,0:27:60.11:0,60,1357	0/0:21,0:21:18.03:0,18,303	0/0:17,0:17:39.13:0,39,949	0/0:25,0:24:54.17:0,54,1249	1/1:12,9:22:12.04:500,12,0	1/1:11,10:24:33.04:932,33,0	0/0:35,0:35:99:0,99,2424	1/1:6,5:11:12.04:501,12,0
chr10	78261658	.	ATACCCTCTTCC	A	13551.44	PASS	AB=0.511;AC=17;AF=0.304;AN=56;BaseQRankSum=16.290;DP=747;FS=2.543;HRun=0;HaplotypeScore=244.8960;InbreedingCoeff=0.9052;MQ=75.28;MQ0=0;MQRankSum=-16.973;QD=76.13;ReadPosRankSum=5.078;VQSLOD=4.2186;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,153,8101	0/0:12,0:12:36.11:0,36,1823	0/0:26,0:26:72.24:0,72,3085	0/0:25,0:25:71.69:0,72,2885	0/0:21,0:21:63.21:0,63,3428	1/1:1,15:16:39.13:1391,39,0	1/1:1,30:31:63.22:2211,63,0	0/0:56,0:55:99:0,156,7977	0/1:1,23:24:99:1868,0,116	0/0:16,0:16:48.16:0,48,2574	0/0:22,0:22:66.22:0,66,3378	0/0:26,0:26:75.24:0,75,4035	0/0:38,0:38:99:0,105,5743	0/0:43,0:43:99:0,122,6494	0/0:41,0:41:99:0,120,6475	1/1:1,38:39:75.26:2656,75,0	1/1:0,16:16:30.10:1070,30,0	1/1:0,11:11:24.08:856,24,0	0/0:24,0:24:69.22:0,69,3668	0/0:24,0:24:69.21:0,69,3620	0/0:41,0:41:99:0,117,6609	0/0:26,0:26:78.27:0,78,4092	0/0:14,0:14:38.92:0,39,1989	0/0:33,0:33:96.31:0,96,5121	1/1:1,12:13:27.09:963,27,0	1/1:1,22:23:66.20:2216,66,0	0/0:30,0:30:87.30:0,87,4889	1/1:0,5:5:9.03:321,9,0
chr10	78261821	.	ATGT	A	1272.23	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.185;DP=821;FS=0.000;HRun=0;HaplotypeScore=112.8519;InbreedingCoeff=0.9995;MQ=61.93;MQ0=1;MQRankSum=-5.160;QD=33.48;ReadPosRankSum=-2.966;VQSLOD=3.4770;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,2578	0/0:13,0:13:39.13:0,39,884	0/0:20,0:17:39.13:0,39,870	0/0:19,0:15:32.78:0,33,635	0/0:28,0:28:84.29:0,84,1904	0/0:33,0:33:96.33:0,96,2174	0/0:28,0:28:78.27:0,78,1766	1/1:7,31:35:84.27:1367,84,0	0/0:33,0:33:87.30:0,87,1969	0/0:20,0:20:60.21:0,60,1343	0/0:19,0:19:51.18:0,51,1155	0/0:45,0:45:99:0,126,2759	0/0:31,0:31:93.32:0,93,2089	0/0:35,0:35:99:0,102,2297	0/0:33,0:32:99:0,99,2214	0/0:39,0:39:99:0,114,2508	0/0:37,0:37:87.64:0,88,2330	0/0:30,0:30:87.30:0,87,1892	0/0:22,0:22:63.19:0,63,1384	0/0:24,0:24:66.21:0,66,1452	0/0:32,0:32:90.31:0,90,2020	0/0:35,0:35:99:0,102,2276	0/0:27,0:27:72.23:0,72,1587	0/0:40,0:40:99:0,114,2546	0/0:21,0:21:60.16:0,60,1305	0/0:31,0:31:93.32:0,93,2066	0/0:32,0:32:90.31:0,90,2004	0/0:14,0:14:36.01:0,36,673
chr10	78262094	.	TCA	T	517.84	PASS	AB=0.613;AC=3;AF=0.054;AN=56;BaseQRankSum=8.677;DP=595;FS=16.036;HRun=0;HaplotypeScore=107.8217;InbreedingCoeff=0.6529;MQ=82.78;MQ0=0;MQRankSum=-7.303;QD=15.69;ReadPosRankSum=1.941;VQSLOD=2.8507;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.14:0,66,1268	0/0:9,0:9:27.09:0,27,512	0/0:24,0:24:71.58:0,72,1239	0/0:26,0:26:53.63:0,54,1228	0/0:31,0:31:93.32:0,93,1844	0/0:16,0:16:48.16:0,48,956	0/0:20,0:20:57.20:0,57,1122	0/0:41,0:41:99:0,123,2309	0/0:12,0:12:33.11:0,33,647	0/0:22,0:22:66.23:0,66,1319	0/0:20,0:20:57.17:0,57,1035	0/0:27,0:27:75.24:0,75,1447	0/0:23,0:23:69.24:0,69,1376	0/0:19,0:19:57.19:0,57,1099	0/0:23,0:23:69.22:0,69,1344	0/0:20,0:20:60.19:0,60,1153	0/0:26,0:25:72.25:0,72,1434	0/0:20,0:20:60.15:0,60,1121	0/0:22,0:22:66.19:0,66,1187	0/0:15,0:15:45.15:0,45,898	0/0:14,0:14:42.13:0,42,803	0/0:28,0:28:78.27:0,78,1555	0/0:23,0:23:62.93:0,63,1242	0/0:25,0:25:57.19:0,57,1114	0/0:13,0:13:39.13:0,39,778	0/1:7,12:19:18.89:309,0,19	0/0:18,0:18:54.19:0,54,1076	1/1:4,10:14:36.32:315,36,0
chr10	78262097	.	TTTTCTTCTCTTTCC	T	2412.33	PASS	AB=0.600;AC=3;AF=0.054;AN=56;BaseQRankSum=8.279;DP=592;FS=14.141;HRun=0;HaplotypeScore=246.9559;InbreedingCoeff=0.6470;MQ=82.99;MQ0=0;MQRankSum=-6.350;QD=75.39;ReadPosRankSum=2.542;VQSLOD=1.7818;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.65:0,67,4348	0/0:9,0:9:27.08:0,27,1710	0/0:23,0:23:69.14:0,69,3582	0/0:26,0:26:75.13:0,75,3942	0/0:31,0:31:93.31:0,93,6130	0/0:16,0:16:48.16:0,48,2537	0/0:20,0:20:60.17:0,60,3402	0/0:39,0:39:99:0,117,6514	0/0:12,0:12:33.09:0,33,1492	0/0:22,0:22:66.22:0,66,4421	0/0:18,0:18:51.15:0,51,3170	0/0:29,0:29:87.28:0,87,5298	0/0:24,0:24:72.25:0,72,4777	0/0:19,0:19:57.19:0,57,3460	0/0:23,0:23:69.24:0,69,4717	0/0:20,0:20:60.21:0,60,3667	0/0:27,0:26:75.26:0,75,4528	0/0:20,0:20:60.21:0,60,3337	0/0:21,0:21:63.17:0,63,3606	0/0:15,0:15:45.15:0,45,2597	0/0:14,0:14:42.14:0,42,2808	0/0:30,0:30:90.31:0,90,5835	0/0:22,0:22:58.96:0,59,3653	0/0:24,0:24:63.14:0,63,3406	0/0:13,0:13:39.13:0,39,2296	0/1:6,12:18:99:1288,0,193	0/0:18,0:18:54.19:0,54,3570	1/1:4,10:14:36.12:1230,36,0
chr10	78262150	.	GGTGTGTGTGTGTGTGTGTGTGTGT	G	7917.50	PASS	AB=0.676;AC=9;AF=0.161;AN=56;BaseQRankSum=9.067;DP=582;FS=0.000;HRun=0;HaplotypeScore=333.7614;InbreedingCoeff=0.7961;MQ=67.94;MQ0=8;MQRankSum=-8.752;QD=71.33;ReadPosRankSum=3.836;VQSLOD=3.4701;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:38.76:0,39,3039	0/0:11,0:11:30.10:0,30,2592	0/0:29,0:24:9.03:0,9,498	0/0:19,0:16:15.05:0,15,871	0/0:26,0:26:57.18:0,57,5148	0/0:24,0:24:21.07:0,21,1438	0/0:16,0:21:9.07:0,9,669	0/0:25,0:24:30.09:0,30,2118	0/0:14,0:15:12.04:0,12,1145	0/0:19,0:26:42.14:0,42,3564	0/0:9,0:12:18.06:0,18,1772	1/1:15,15:33:51.18:3126,51,0	0/1:13,10:25:2.14:1999,0,2	0/0:23,0:23:45.63:0,46,4322	0/0:15,0:18:39.13:0,39,2586	0/0:20,0:26:21.53:0,22,1648	0/0:30,0:30:63.22:0,63,5066	0/0:12,0:12:27.06:0,27,1408	0/0:12,0:11:21.07:0,21,1583	0/0:14,0:13:12.04:0,12,945	0/0:14,0:25:10.73:0,11,1197	1/1:11,11:22:24.02:1511,24,0	1/1:7,10:18:18.95:1093,19,0	1/1:9,4:13:2.95:188,3,0	0/0:16,0:27:9.03:0,9,827	0/0:17,0:22:42.14:0,42,2778	0/0:19,0:18:36.12:0,36,3152	0/0:8,0:7:12.04:0,12,904
chr10	78262893	.	T	TC	1909.26	PASS	AB=0.775;AC=18;AF=0.321;AN=56;BaseQRankSum=11.945;DP=484;FS=5.757;HRun=1;HaplotypeScore=57.4649;InbreedingCoeff=0.7808;MQ=54.34;MQ0=21;MQRankSum=-4.484;QD=13.26;ReadPosRankSum=-0.575;VQSLOD=2.0668;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.24:0,90,1124	0/0:7,0:7:21.05:0,21,246	0/1:22,0:5:6.51:7,0,90	0/0:23,0:6:15.05:0,15,193	0/0:26,0:26:69.20:0,69,864	1/1:2,11:13:12.04:170,12,0	1/1:3,8:10:26.88:355,27,0	0/0:26,0:26:72.06:0,72,819	1/1:1,7:7:3.01:43,3,0	0/0:25,0:25:75.23:0,75,947	0/0:18,0:18:47.88:0,48,570	0/0:14,0:14:36.07:0,36,414	0/0:13,0:13:39.08:0,39,472	0/0:14,0:14:36.12:0,36,466	0/0:17,0:17:48.12:0,48,579	1/1:2,11:13:23.04:289,23,0	1/1:4,20:23:42.14:596,42,0	0/1:2,0:10:26.49:73,0,26	0/0:17,0:17:51.15:0,51,643	0/0:25,0:25:75.16:0,75,919	0/0:7,0:7:18.04:0,18,207	0/0:17,0:17:48.14:0,48,596	0/0:15,0:15:32.89:0,33,371	0/0:14,0:14:39.13:0,39,504	1/1:9,5:13:24.25:301,24,0	1/1:1,0:18:31.92:249,32,0	0/0:32,0:31:89.96:0,90,1136	1/1:0,0:8:2.99:24,3,0
chr10	78263116	.	GA	G	8262.67	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=16.292;DP=492;FS=12.698;HRun=7;HaplotypeScore=91.0964;InbreedingCoeff=0.9844;MQ=83.79;MQ0=0;MQRankSum=-0.263;QD=27.82;ReadPosRankSum=0.858;VQSLOD=4.2437;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:36.04:0,36,418	1/1:0,8:8:24.05:245,24,0	0/0:20,0:20:51.74:0,52,600	0/0:11,0:11:22.28:0,22,243	1/1:0,32:32:87.19:887,87,0	0/0:20,0:20:60.17:0,60,738	0/0:10,0:10:27.04:0,27,322	1/1:6,18:24:54.12:550,54,0	0/0:10,0:10:30.10:0,30,377	1/1:2,19:21:57.12:581,57,0	1/1:1,25:26:75.17:765,75,0	1/1:2,15:17:45.10:459,45,0	1/1:1,15:16:42.10:429,42,0	1/1:1,18:19:54.12:551,54,0	1/1:0,13:13:33.08:337,33,0	0/0:14,0:14:39.12:0,39,491	0/0:20,0:20:57.15:0,57,700	0/0:23,0:23:57.18:0,57,717	1/1:0,17:17:51.12:520,51,0	1/1:0,22:22:60.13:612,60,0	1/1:0,16:16:45.10:459,45,0	1/1:0,19:19:57.13:581,57,0	1/1:1,14:15:42.10:429,42,0	1/1:1,2:3:6.01:61,6,0	0/0:15,0:15:42.13:0,42,529	0/0:17,0:17:51.16:0,51,642	1/1:3,26:29:78.18:796,78,0	0/0:21,0:21:63.20:0,63,791
chr10	78264616	.	TG	T	9233.94	PASS	AB=0.938;AC=52;AF=0.929;AN=56;BaseQRankSum=1.297;DP=636;FS=4.491;HRun=11;HaplotypeScore=112.9374;InbreedingCoeff=0.3438;MQ=72.82;MQ0=2;MQRankSum=-2.764;QD=14.94;ReadPosRankSum=5.060;VQSLOD=4.8588;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:30,5:35:12.93:13,0,261	1/1:4,5:9:11.96:98,12,0	0/1:14,0:14:9.09:9,0,69	0/0:18,0:16:1.57:0,2,104	1/1:2,14:16:41.91:345,42,0	1/1:5,0:22:31.80:91,32,0	1/1:5,0:24:28.52:82,29,0	1/1:3,21:24:59.78:489,60,0	1/1:8,0:19:25.76:75,26,0	1/1:4,17:21:50.87:418,51,0	1/1:5,12:17:44.88:363,45,0	1/1:2,28:30:71.86:590,72,0	1/1:6,27:32:71.89:591,72,0	1/1:6,15:21:44.90:369,45,0	1/1:6,14:20:44.88:369,45,0	1/1:4,0:15:16.29:47,16,0	1/1:10,0:34:46.83:135,47,0	1/1:2,18:20:53.93:443,54,0	1/1:11,19:30:56.88:467,57,0	1/1:3,27:30:80.87:664,81,0	1/1:9,33:42:98.81:812,99,0	1/1:0,21:21:59.93:493,60,0	1/1:2,17:19:50.93:418,51,0	1/1:2,18:20:47.91:394,48,0	1/1:5,0:18:28.77:83,29,0	1/1:7,24:31:77.89:637,78,0	1/1:2,23:25:68.92:566,69,0	1/1:0,7:7:20.98:172,21,0
chr10	78264626	.	GGT	G	878.67	PASS	AB=0.983;AC=12;AF=0.214;AN=56;BaseQRankSum=-9.561;DP=598;FS=5.174;HRun=0;HaplotypeScore=148.0925;InbreedingCoeff=0.7756;MQ=71.38;MQ0=2;MQRankSum=0.573;QD=7.03;ReadPosRankSum=2.685;VQSLOD=3.3201;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:67.97:0,68,785	0/0:7,0:7:17.25:0,17,101	0/1:9,0:9:4.62:5,0,168	0/0:19,0:17:41.73:0,42,410	0/0:17,0:17:41.19:0,41,197	1/1:17,3:20:40.80:203,41,0	1/1:20,2:22:15.68:165,16,0	0/0:24,0:24:67.53:0,68,363	1/1:13,3:15:37.66:242,38,0	0/0:20,0:20:52.55:0,53,290	0/0:17,0:17:33.83:0,34,190	0/0:30,0:30:71.45:0,71,343	0/0:33,0:32:83.74:0,84,445	0/0:19,0:19:39.47:0,39,208	0/0:21,0:21:51.32:0,51,273	1/1:12,0:12:2.47:68,2,0	0/1:28,1:29:8.75:192,0,9	0/0:19,0:19:53.03:0,53,255	0/0:27,0:27:59.91:0,60,384	0/0:31,0:31:81.18:0,81,412	0/0:35,0:35:97.96:0,98,469	0/0:25,0:25:65.94:0,66,347	0/0:19,0:19:46.53:0,47,212	0/0:21,0:21:47.43:0,47,224	1/1:14,3:17:21.95:175,22,0	0/0:29,0:29:75.96:0,76,357	0/0:24,0:24:62.13:0,62,276	0/0:7,0:7:19.63:0,20,92
chr10	78264666	.	CA	C	813.45	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.442;DP=660;FS=0.751;HRun=4;HaplotypeScore=106.5917;InbreedingCoeff=0.9025;MQ=84.08;MQ0=0;MQRankSum=-2.102;QD=29.05;ReadPosRankSum=0.482;VQSLOD=2.9299;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:81.24:0,81,1093	0/0:13,0:13:39.09:0,39,524	0/0:27,0:27:81.17:0,81,1047	0/0:22,0:22:60.09:0,60,790	0/0:24,0:24:69.22:0,69,949	0/0:15,0:15:36.10:0,36,485	0/0:20,0:20:51.12:0,51,675	0/0:22,0:19:57.19:0,57,798	0/0:15,0:15:42.13:0,42,571	0/0:25,0:25:75.24:0,75,1036	0/0:21,0:21:54.18:0,54,756	0/0:35,0:35:96.32:0,96,1347	0/0:49,0:49:99:0,141,1931	0/0:28,0:28:78.22:0,78,1070	0/0:23,0:23:69.23:0,69,966	0/0:19,0:19:48.15:0,48,657	0/0:30,0:30:63.19:0,63,863	0/0:24,0:24:60.19:0,60,818	0/0:24,0:24:63.21:0,63,881	0/0:36,0:36:99:0,102,1406	0/0:23,0:23:66.22:0,66,922	0/0:29,0:29:87.28:0,87,1194	0/0:12,0:12:36.12:0,36,499	0/0:17,0:17:36.08:0,36,482	0/0:19,0:19:54.18:0,54,756	1/1:3,24:27:75.22:886,75,0	0/0:24,0:24:66.20:0,66,906	1/1:0,1:1:3.01:36,3,0
chr10	78265014	.	AG	A	6291.26	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=15.353;DP=702;FS=10.315;HRun=2;HaplotypeScore=89.7549;InbreedingCoeff=0.4889;MQ=74.14;MQ0=0;MQRankSum=-1.573;QD=14.53;ReadPosRankSum=4.056;VQSLOD=3.5929;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,161,2167	1/1:0,7:7:18.05:219,18,0	0/0:15,0:15:32.46:0,32,315	0/0:13,0:12:23.34:0,23,273	1/1:1,33:34:90.08:1084,90,0	0/0:31,0:30:93.22:0,93,1277	0/0:22,0:22:61.56:0,62,855	1/1:1,26:27:75.16:906,75,0	0/0:27,0:27:78.16:0,78,1055	1/1:2,27:29:80.39:984,80,0	1/1:2,12:14:32.94:401,33,0	0/1:38,0:38:14.36:76,0,14	1/1:36,0:36:6.44:91,6,0	1/1:0,24:24:66.21:853,66,0	1/1:1,27:28:75.24:971,75,0	0/0:20,0:20:60.17:0,60,824	0/0:41,0:41:99:0,119,1623	1/1:1,11:12:30.10:388,30,0	1/1:20,1:21:21.10:96,21,0	0/1:27,0:27:26.55:27,0,117	0/1:27,0:27:22.82:23,0,115	0/1:21,0:21:41.45:60,0,41	0/1:24,0:24:30.81:31,0,156	0/1:29,0:29:15.23:15,0,65	0/0:15,0:15:42.13:0,42,607	0/0:20,0:20:57.07:0,57,778	0/1:35,0:34:27.05:69,0,27	0/0:9,0:9:27.08:0,27,379
chr10	78265016	.	GA	G	6970.26	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=14.161;DP=700;FS=4.104;HRun=9;HaplotypeScore=88.3103;InbreedingCoeff=0.9018;MQ=74.13;MQ0=0;MQRankSum=-1.091;QD=16.21;ReadPosRankSum=1.973;VQSLOD=5.1652;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,111,1495	1/1:7,0:7:13.77:64,14,0	0/0:15,0:15:17.04:0,17,149	0/0:15,0:13:13.87:0,14,140	1/1:34,0:34:21.71:293,22,0	0/0:31,0:30:81.20:0,81,912	0/0:22,0:22:29.74:0,30,596	1/1:28,0:28:12.03:212,12,0	0/0:27,0:27:66.10:0,66,717	1/1:29,1:30:5.16:195,5,0	0/1:14,0:14:11.22:102,0,11	1/1:4,35:39:96.04:878,96,0	1/1:1,34:36:98.09:884,98,0	1/1:24,0:24:61.55:288,62,0	1/1:28,0:28:69.35:311,69,0	0/0:20,0:20:48.14:0,48,554	0/0:39,1:40:74.84:0,75,1111	1/1:11,0:11:28.02:131,28,0	1/1:4,19:23:66.02:599,66,0	1/1:7,18:25:51:462,51,0	1/1:6,19:25:48.01:439,48,0	1/1:3,18:21:51.02:464,51,0	1/1:9,14:23:36:329,36,0	1/1:4,24:28:60.03:549,60,0	0/0:14,0:14:39.12:0,39,450	0/0:22,0:22:54.10:0,54,586	1/1:2,32:33:84.04:769,84,0	0/0:9,0:9:24.07:0,24,277
chr10	78265025	.	AT	A	773.22	PASS	AB=0.981;AC=12;AF=0.214;AN=56;BaseQRankSum=6.024;DP=671;FS=8.363;HRun=1;HaplotypeScore=105.7429;InbreedingCoeff=0.3759;MQ=75.29;MQ0=0;MQRankSum=-1.620;QD=3.24;ReadPosRankSum=2.854;VQSLOD=-0.1105;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,129,1811	0/0:9,0:9:22.54:0,23,133	0/0:16,0:16:29.01:0,29,360	0/0:16,0:14:11.74:0,12,270	0/0:31,0:31:63.25:0,63,361	0/0:31,0:30:87.22:0,87,1159	0/0:21,0:21:55.63:0,56,792	0/0:27,0:27:67.58:0,68,433	0/0:25,0:25:69.16:0,69,898	0/0:26,0:26:60.38:0,60,415	0/0:13,0:13:24.29:0,24,157	0/1:41,1:42:66.91:129,0,67	0/1:38,0:38:5.98:121,0,6	0/0:26,0:26:64.78:0,65,312	0/0:29,0:29:75.90:0,76,392	0/0:17,0:17:51.16:0,51,708	0/0:40,0:40:99:0,115,1497	0/0:12,0:12:29.44:0,29,138	0/1:25,0:25:30.63:98,0,31	0/1:19,1:20:7.26:90,0,7	0/1:20,0:20:12.19:47,0,12	0/1:20,1:21:9.35:151,0,9	1/1:15,1:16:8.97:77,9,0	1/1:25,0:25:3.97:49,4,0	0/0:14,0:14:42.08:0,42,562	0/0:21,0:21:56.38:0,56,741	1/1:32,0:32:49.16:172,49,0	0/0:8,0:8:24.08:0,24,342
chr10	78265129	.	CGTGT	C	8761.40	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=2.165;DP=847;FS=9.805;HRun=0;HaplotypeScore=162.5103;InbreedingCoeff=0.9100;MQ=63.90;MQ0=7;MQRankSum=-0.103;QD=26.79;ReadPosRankSum=2.558;VQSLOD=4.4484;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,111,2615	0/0:10,0:10:24.08:0,24,599	0/0:41,0:18:13.38:0,13,180	0/0:32,0:18:22.44:0,22,330	0/0:23,0:23:60.17:0,60,1336	0/0:22,0:22:53.80:0,54,1202	0/0:37,0:40:64.82:0,65,1722	0/1:31,0:31:99:186,0,285	0/0:28,0:32:83.62:0,84,1821	0/0:23,0:23:60.17:0,60,1213	0/0:8,0:8:18.06:0,18,443	1/1:9,36:45:84.22:1404,84,0	1/1:15,26:41:87.27:1438,87,0	0/0:38,0:38:87.14:0,87,1734	0/0:39,0:39:99:0,102,2205	0/0:22,0:24:62.79:0,63,1459	0/0:57,0:59:99:0,141,3188	0/0:28,0:28:72.62:0,73,1492	1/1:9,17:26:54.13:847,54,0	1/1:1,19:20:36.38:617,36,0	1/1:8,45:53:77.89:1336,78,0	1/1:6,12:19:15.05:257,15,0	1/1:4,18:22:26.93:460,27,0	1/1:17,22:39:93.22:1426,93,0	0/0:13,0:14:32.86:0,33,683	0/0:30,0:30:71.96:0,72,1576	1/1:9,22:31:48.12:791,48,0	0/0:11,0:11:15.05:0,15,369
chr10	78265671	.	GC	G	4673.22	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.792;DP=559;FS=5.213;HRun=2;HaplotypeScore=74.5406;InbreedingCoeff=0.9864;MQ=76.54;MQ0=0;MQRankSum=-10.657;QD=35.95;ReadPosRankSum=2.269;VQSLOD=5.5624;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.19:0,57,854	1/1:0,9:9:27.09:350,27,0	0/0:16,0:17:47.02:0,47,679	0/0:11,0:11:24.05:0,24,312	1/1:1,29:30:78.25:1011,78,0	0/0:25,0:25:72.23:0,72,1059	0/0:14,0:14:42.13:0,42,611	0/0:23,0:23:66.20:0,66,934	0/0:16,0:16:45.15:0,45,674	1/1:1,26:27:81.22:1032,81,0	1/1:0,26:26:72.23:933,72,0	0/0:23,0:23:69.23:0,69,1030	0/0:21,0:21:60.20:0,60,897	1/1:0,13:13:30.10:389,30,0	1/1:1,24:25:75.23:958,75,0	0/0:22,0:22:66.22:0,66,989	0/0:24,0:23:69.23:0,69,1030	0/0:26,0:26:75.18:0,75,1070	0/0:21,0:21:60.20:0,60,895	0/0:23,0:23:69.23:0,69,1030	0/0:7,0:7:21.05:0,21,294	0/0:19,0:19:57.19:0,57,852	0/0:9,0:9:27.09:0,27,405	0/0:10,0:10:30.10:0,30,446	0/0:39,0:39:99:0,114,1708	0/0:30,1:31:54.40:0,54,1309	0/0:26,0:26:75.25:0,75,1124	0/0:3,0:3:9.03:0,9,135
chr10	78265691	.	C	CA	5400.38	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=6.715;DP=543;FS=0.000;HRun=6;HaplotypeScore=70.4983;InbreedingCoeff=0.9902;MQ=78.54;MQ0=0;MQRankSum=-9.465;QD=30.00;ReadPosRankSum=0.003;VQSLOD=5.2254;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:51.08:0,51,511	1/1:0,9:9:27.09:339,27,0	0/0:20,0:20:49.29:0,49,503	0/0:10,0:10:23.90:0,24,214	1/1:5,19:24:54.17:679,54,0	0/0:24,0:24:60.13:0,60,612	0/0:18,0:18:45.10:0,45,459	1/1:0,0:22:60.13:318,60,0	0/0:14,0:14:39.07:0,39,390	1/1:6,21:27:66.21:820,66,0	1/1:2,15:17:45.14:565,45,0	0/0:18,0:18:51.12:0,51,520	0/0:17,0:17:48.11:0,48,490	1/1:0,18:18:48.15:604,48,0	1/1:5,21:26:66.21:830,66,0	0/0:20,0:20:57.10:0,57,568	0/0:25,0:24:69.10:0,69,686	0/0:31,0:31:78.13:0,78,786	0/0:18,0:18:54.12:0,54,551	0/0:25,0:25:72.16:0,72,734	0/0:10,0:10:30.07:0,30,306	0/0:18,0:18:51.12:0,51,520	0/0:12,0:12:36.08:0,36,367	0/0:12,0:12:33.07:0,33,337	0/0:27,0:27:81.18:0,81,826	1/1:2,31:33:90.29:1132,90,0	0/0:24,0:24:69.15:0,69,704	1/1:1,3:4:9.03:113,9,0
chr10	78266479	.	G	GTT	2306.71	PASS	AB=0.704;AC=29;AF=0.518;AN=56;BaseQRankSum=-0.341;DP=565;FS=8.887;HRun=14;HaplotypeScore=98.1827;InbreedingCoeff=0.4141;MQ=77.51;MQ0=2;MQRankSum=-1.985;QD=6.55;ReadPosRankSum=-4.090;VQSLOD=-0.5847;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:20:29.12:0,29,262	1/1:5,0:13:20.28:90,20,0	0/0:26,0:18:23.27:0,23,169	0/1:16,0:16:14.51:15,0,20	1/1:25,1:30:1.76:179,2,0	0/0:33,0:35:65.34:0,65,573	0/0:19,0:20:37.61:0,38,288	0/1:18,2:32:6.03:224,0,6	0/1:15,4:21:12.60:13,0,214	1/1:11,1:23:1.20:138,1,0	1/1:6,0:23:10.05:124,10,0	1/1:10,3:22:18.92:198,19,0	1/1:5,2:14:9.02:107,9,0	0/1:6,0:21:8.53:45,0,9	0/1:4,0:19:11.08:24,0,11	0/0:16,0:18:1.52:0,2,146	0/0:15,0:17:30.53:0,31,213	1/1:6,0:5:3:29,3,0	0/0:11,0:14:22.84:0,23,105	0/0:4,0:14:19.32:0,19,95	0/0:5,0:14:24.42:0,24,103	1/1:12,5:21:30.07:286,30,0	1/1:7,1:18:15.74:143,16,0	1/1:3,15:21:27.09:354,27,0	0/1:12,1:19:33.44:33,0,172	1/1:8,10:21:35.32:332,35,0	0/0:19,0:34:57.26:0,57,262	0/1:2,5:10:7.05:165,0,7
chr10	78266730	.	GTCTATCTA	G	4663	PASS	AB=0.760;AC=12;AF=0.214;AN=56;BaseQRankSum=2.872;DP=580;FS=1.526;HRun=0;HaplotypeScore=180.1662;InbreedingCoeff=0.6038;MQ=56.63;MQ0=8;MQRankSum=-4.145;QD=27.11;ReadPosRankSum=-2.001;VQSLOD=4.4407;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:54.19:0,54,1517	0/1:3,6:9:3.60:410,0,4	0/0:21,0:15:18.04:0,18,319	0/0:27,0:15:19.22:0,19,376	1/1:9,7:16:14.97:283,15,0	0/0:19,0:19:45.15:0,45,1184	0/0:14,0:14:24.06:0,24,517	1/1:5,19:24:54.13:932,54,0	0/0:23,0:23:60.19:0,60,1488	1/1:34,0:34:67.59:1384,68,0	0/1:17,6:23:18.24:307,0,18	0/0:16,0:16:42.14:0,42,1201	0/0:25,0:25:60.18:0,60,1698	1/1:9,13:22:12.81:880,13,0	0/1:8,7:15:68.11:443,0,68	0/0:28,0:28:69.24:0,69,1921	0/0:15,0:15:33.41:0,33,925	0/0:21,0:21:56.12:0,56,1172	0/0:17,0:16:39.12:0,39,1003	0/0:23,0:23:48.16:0,48,1322	0/0:15,0:15:33.11:0,33,961	0/0:18,0:18:39.13:0,39,1099	0/0:20,0:20:45.15:0,45,1233	0/0:21,0:21:42.14:0,42,1206	0/0:28,0:28:72.24:0,72,2033	0/1:28,1:29:23.37:23,0,727	0/0:20,0:20:45.14:0,45,1357	0/0:10,0:10:21.74:0,22,340
chr10	78266738	.	A	ATCTATCCT	6136.14	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=3.093;DP=573;FS=3.043;HRun=0;HaplotypeScore=178.8054;InbreedingCoeff=0.9050;MQ=53.80;MQ0=8;MQRankSum=-4.048;QD=36.09;ReadPosRankSum=-4.742;VQSLOD=3.4902;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:60.56:0,61,1497	1/1:8,0:9:19.20:504,19,0	0/0:21,0:11:20.99:0,21,337	0/0:22,0:11:19.22:0,19,376	1/1:18,0:18:26.11:403,26,0	0/0:21,0:21:54.18:0,54,1284	0/0:13,0:13:23.35:0,23,495	1/1:22,0:20:54.13:932,54,0	0/0:25,0:25:63.18:0,63,1467	1/1:1,32:35:79.44:1741,79,0	1/1:18,2:21:33.64:519,34,0	0/0:20,0:20:45.14:0,45,1071	0/0:27,0:27:63.19:0,63,1581	1/1:21,0:21:48.16:1106,48,0	1/1:14,0:14:30.10:763,30,0	0/0:27,0:27:72.25:0,72,1813	0/0:14,0:14:35.86:0,36,857	0/0:21,0:21:56.12:0,56,878	0/0:17,0:16:48.15:0,48,1140	0/0:21,0:21:51.16:0,51,1248	0/0:14,0:14:36.12:0,36,937	0/0:17,0:17:41.26:0,41,1015	0/0:19,0:19:51.17:0,51,1246	0/0:16,0:16:42.14:0,42,1034	0/0:26,0:26:72.24:0,72,1819	0/1:30,0:30:99:168,0,492	0/0:20,0:20:48.15:0,48,1254	0/0:13,0:13:24.74:0,25,287
chr10	78266865	.	C	CCTAT	11093.28	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=-3.097;DP=761;FS=0.000;HRun=0;HaplotypeScore=234.4051;InbreedingCoeff=0.5193;MQ=48.42;MQ0=9;MQRankSum=0.531;QD=17.61;ReadPosRankSum=2.287;VQSLOD=3.8744;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:45.15:0,45,716	1/1:14,0:14:26.11:315,26,0	0/0:37,0:16:3.67:0,4,87	0/0:29,0:8:3.01:0,3,43	1/1:36,0:35:1.57:110,2,0	1/1:4,12:16:24.08:574,24,0	1/1:9,5:13:24.08:519,24,0	1/1:43,0:39:20.38:177,20,0	1/1:10,10:20:33.11:776,33,0	1/1:32,0:30:50.79:491,51,0	1/1:29,0:28:44.62:446,45,0	1/1:10,21:31:42.48:1100,42,0	1/1:19,20:39:48.14:1145,48,0	1/1:19,0:19:26.07:277,26,0	0/0:33,0:33:1.40:0,1,29	1/1:27,0:26:26.36:260,26,0	1/1:11,11:22:35.33:792,35,0	0/1:24,0:23:22.63:44,0,23	1/1:14,0:12:4.52:52,5,0	0/1:40,0:38:9.54:175,0,10	0/0:10,0:10:0.89:0,1,2	1/1:8,15:23:26.95:644,27,0	1/1:23,14:37:33.21:789,33,0	1/1:11,11:22:14.76:358,15,0	1/1:13,22:35:9.43:1241,9,0	1/1:44,0:44:50.45:324,50,0	1/1:33,0:33:9.19:395,9,0	1/1:15,0:15:20.86:89,21,0
chr10	78266896	.	ATTCT	A	7397.74	PASS	AB=0.827;AC=24;AF=0.429;AN=56;BaseQRankSum=2.109;DP=750;FS=5.549;HRun=0;HaplotypeScore=270.9255;InbreedingCoeff=-0.5848;MQ=47.56;MQ0=7;MQRankSum=-8.066;QD=11.80;ReadPosRankSum=0.622;VQSLOD=3.8641;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.25:0,72,1902	0/1:13,4:17:99:354,0,554	0/1:44,0:17:33.09:33,0,557	0/0:37,0:17:41.02:0,41,832	0/1:27,0:37:24.19:24,0,1378	0/0:15,0:15:29.90:0,30,467	0/1:17,2:18:99:127,0,385	0/1:43,3:41:99:136,0,1223	0/0:20,0:20:56.88:0,57,654	0/1:23,11:33:99:792,0,1042	0/1:22,9:30:99:740,0,627	0/1:23,12:36:99:469,0,515	0/1:28,11:38:99:365,0,644	0/1:17,7:24:99:401,0,758	0/1:15,0:22:40.55:41,0,568	0/1:17,9:25:99:461,0,270	0/1:20,0:20:40.69:41,0,298	0/1:15,1:17:99:126,0,287	0/1:10,4:12:99:121,0,414	0/1:30,8:38:99:460,0,316	0/1:8,0:8:18.07:18,0,88	0/1:18,8:26:99:240,0,428	0/1:22,6:28:99:164,0,472	0/1:17,4:21:3.01:3,0,110	0/0:26,0:26:41.77:0,42,917	0/1:24,7:35:99:947,0,114	0/1:22,6:30:57.48:807,0,57	1/1:1,10:11:27.09:528,27,0
chr10	78266897	.	T	TCTA	5530.02	PASS	AB=0.981;AC=31;AF=0.554;AN=56;BaseQRankSum=5.550;DP=734;FS=54.151;HRun=0;HaplotypeScore=272.5969;InbreedingCoeff=-0.2541;MQ=47.64;MQ0=7;MQRankSum=-1.599;QD=9.45;ReadPosRankSum=5.154;VQSLOD=2.1817;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:70.12:0,70,1199	0/1:17,0:17:99:179,0,241	0/0:42,0:17:38.51:0,39,514	0/0:34,0:16:45.60:0,46,620	0/1:37,0:36:42.89:43,0,654	1/1:13,0:13:3.74:191,4,0	0/1:18,0:18:55.64:224,0,56	0/0:45,0:40:46.64:0,47,1369	0/1:20,0:20:98.27:220,0,98	0/1:35,0:33:99:261,0,597	0/1:30,0:29:99:257,0,313	1/1:36,0:36:33.39:415,33,0	1/1:40,0:39:50.64:470,51,0	0/1:24,0:24:99:129,0,350	0/1:21,0:21:44.80:45,0,252	0/1:27,0:26:99:129,0,189	0/1:17,0:19:92.07:253,0,92	0/1:15,0:14:21.09:21,0,227	0/1:14,0:12:66.81:67,0,281	0/1:36,3:38:99:253,0,99	0/1:5,0:7:7.31:7,0,17	1/1:26,0:26:3.44:234,3,0	1/1:26,0:26:6.97:282,7,0	1/1:17,0:18:14.49:134,14,0	0/1:26,0:26:99:409,0,104	0/1:35,0:35:97.19:590,0,97	0/1:27,4:30:6.26:574,0,6	1/1:10,0:10:23.87:145,24,0
chr10	78266898	.	TCTTC	T	3998.04	PASS	AB=0.989;AC=20;AF=0.357;AN=56;BaseQRankSum=6.216;DP=731;FS=2.970;HRun=0;HaplotypeScore=280.2034;InbreedingCoeff=-0.3872;MQ=46.62;MQ0=7;MQRankSum=-7.329;QD=8.09;ReadPosRankSum=-0.344;VQSLOD=2.6858;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:26:60.31:0,60,2068	0/1:17,0:17:99:221,0,364	0/0:43,0:16:22.75:0,23,615	0/0:35,0:16:43.34:0,43,917	0/0:37,0:36:62.79:0,63,1087	0/0:12,0:12:30.07:0,30,602	0/1:20,0:19:36.11:36,0,502	0/1:44,1:41:28.04:28,0,1319	0/0:19,0:19:57.05:0,57,793	0/1:35,0:33:99:447,0,716	0/1:29,0:28:99:475,0,386	0/1:36,0:36:99:260,0,738	0/1:39,0:38:99:220,0,825	0/1:23,0:23:99:263,0,465	0/0:21,0:21:14.64:0,15,539	0/1:27,0:26:99:269,0,345	0/1:19,1:20:18.69:19,0,463	0/1:15,0:14:8.41:8,0,416	0/1:14,0:12:64.02:64,0,538	0/1:39,0:38:99:248,0,424	0/1:6,1:7:4.24:4,0,101	0/1:26,0:26:99:156,0,537	0/1:25,0:25:79.45:79,0,621	0/0:18,0:18:9.80:0,10,171	0/0:26,0:26:69.39:0,69,1218	0/1:36,0:36:99:391,0,322	0/1:31,0:30:99:446,0,143	1/1:10,0:10:27.09:362,27,0
chr10	78266900	.	T	TA	1702.47	PASS	AB=0.904;AC=16;AF=0.286;AN=56;BaseQRankSum=5.852;DP=736;FS=0.754;HRun=0;HaplotypeScore=267.6016;InbreedingCoeff=-0.2903;MQ=46.46;MQ0=7;MQRankSum=-4.088;QD=4.24;ReadPosRankSum=1.331;VQSLOD=3.1578;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.24:0,75,1032	0/0:18,0:18:28.32:0,28,403	0/0:43,0:16:26:0,26,412	0/0:32,0:15:40.94:0,41,529	0/1:24,11:34:47.30:47,0,688	0/0:12,0:12:30.06:0,30,379	0/0:18,1:18:6.48:0,6,383	0/1:48,0:44:50.32:50,0,1260	0/0:21,0:21:57.07:0,57,651	0/0:34,0:32:5.37:0,5,694	0/0:30,0:29:36.12:0,36,461	0/1:34,1:35:69.12:69,0,620	0/1:39,0:38:89.38:89,0,661	0/0:23,0:23:36.81:0,37,511	0/1:15,7:22:99:101,0,306	0/0:28,0:27:1.45:0,1,359	0/0:22,0:22:42.72:0,43,536	0/1:12,2:14:37.53:38,0,275	0/1:15,0:13:7.40:7,0,274	0/1:36,4:39:99:183,0,229	0/1:5,2:7:34.67:35,0,75	0/1:26,0:26:64.97:65,0,440	0/1:23,0:23:2.47:2,0,457	0/1:18,1:20:15.08:15,0,189	0/0:26,0:26:74.82:0,75,927	0/1:32,4:36:70.59:756,0,71	0/1:25,5:29:38.93:372,0,39	1/1:10,0:10:1.80:25,2,0
chr10	78266912	.	TTCTATCTA	T	2954.87	PASS	AB=0.613;AC=11;AF=0.196;AN=56;BaseQRankSum=1.149;DP=727;FS=1.167;HRun=0;HaplotypeScore=314.4632;InbreedingCoeff=0.7564;MQ=46.23;MQ0=7;MQRankSum=-6.800;QD=23.27;ReadPosRankSum=-0.005;VQSLOD=2.5662;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:60.17:0,60,1927	0/0:17,0:17:36.12:0,36,1270	0/0:30,0:13:14.88:0,15,307	0/0:34,0:18:21:0,21,389	0/0:34,0:33:54.19:0,54,2171	1/1:11,2:13:15.05:381,15,0	1/1:8,12:19:18.79:399,19,0	0/0:49,0:49:93.05:0,93,1558	1/1:9,14:23:27.09:690,27,0	0/0:37,0:36:83.05:0,83,2763	0/0:29,0:28:39.13:0,39,1370	0/0:30,0:30:9.95:0,10,64	0/0:40,0:39:17.29:0,17,215	0/0:26,0:26:45.15:0,45,1576	0/0:23,0:23:39.13:0,39,1220	1/1:11,19:28:44.98:922,45,0	0/1:6,12:18:8.50:308,0,8	0/0:15,0:15:18.68:0,19,149	0/0:18,0:16:22.22:0,22,365	0/0:42,0:41:24.68:0,25,238	0/0:5,0:6:1.92:0,2,19	0/0:29,0:29:22.06:0,22,186	0/0:25,0:25:5.44:0,5,136	0/0:16,0:16:1.87:0,2,14	1/1:13,9:22:29.84:426,30,0	0/0:36,0:36:69.50:0,69,1067	0/0:26,0:24:16.81:0,17,149	0/0:8,0:7:0.89:0,1,2
chr10	78266920	.	A	ATCCT	2819.50	PASS	AB=0.987;AC=14;AF=0.250;AN=56;BaseQRankSum=5.426;DP=726;FS=5.660;HRun=0;HaplotypeScore=267.4158;InbreedingCoeff=-0.1621;MQ=45.44;MQ0=5;MQRankSum=-8.860;QD=8.95;ReadPosRankSum=-5.923;VQSLOD=1.3296;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:81.20:0,81,1352	0/1:19,0:19:89.19:89,0,718	0/0:27,0:13:32.14:0,32,494	0/0:28,0:15:39.11:0,39,660	0/1:29,0:28:99:111,0,994	0/1:14,1:15:99:455,0,187	0/1:17,0:17:16.46:301,0,16	0/0:50,0:49:99:0,138,1964	0/1:22,0:22:99:424,0,153	0/1:36,0:36:26.14:26,0,1502	0/1:26,0:26:99:142,0,734	0/0:32,0:32:58.55:0,59,697	0/0:39,0:38:49.90:0,50,603	0/1:27,0:27:99:112,0,872	0/1:25,0:25:99:144,0,762	1/1:26,4:28:50.59:798,51,0	0/1:17,1:17:33.37:85,0,33	0/0:17,0:16:16.17:0,16,194	0/0:18,0:15:39.12:0,39,537	0/0:42,0:41:45.53:0,46,559	0/0:8,0:8:3.27:0,3,17	0/0:30,0:30:44:0,44,515	0/0:23,0:23:36.30:0,36,443	0/0:16,0:16:5.57:0,6,32	0/1:22,1:23:99:284,0,281	0/0:37,0:37:97.65:0,98,1470	0/1:28,0:26:6.85:7,0,447	0/0:10,0:9:6.02:0,6,80
chr10	78267005	.	G	GTC	618.56	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.152;DP=808;FS=8.541;HRun=0;HaplotypeScore=126.5058;InbreedingCoeff=0.9957;MQ=67.30;MQ0=8;MQRankSum=-0.039;QD=28.12;ReadPosRankSum=1.205;VQSLOD=5.2218;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:90.27:0,90,1152	0/0:13,0:13:33.07:0,33,397	0/0:53,0:39:77.85:0,78,897	0/0:59,0:46:49.57:0,50,627	0/0:16,0:16:45.13:0,45,570	0/0:28,0:27:63.98:0,64,823	0/0:30,0:30:66.16:0,66,823	0/0:39,0:39:72.15:0,72,885	0/0:29,0:29:69.22:0,69,897	0/0:34,0:34:75.21:0,75,937	0/0:22,0:22:54.16:0,54,687	0/0:38,0:38:99:0,102,1311	0/0:28,0:28:69.22:0,69,892	0/0:28,0:28:63.16:0,63,775	0/0:33,0:33:78.24:0,78,999	0/0:29,0:27:69.22:0,69,896	0/0:20,0:20:45.15:0,45,584	1/1:1,21:22:42.14:713,42,0	0/0:23,0:23:57.16:0,57,709	0/0:23,0:23:54.16:0,54,686	0/0:37,0:37:96.19:0,96,1191	0/0:25,0:25:66.17:0,66,824	0/0:22,0:22:57.19:0,57,740	0/0:24,0:24:57.18:0,57,739	0/0:18,0:18:51.15:0,51,647	0/0:36,0:36:99:0,99,1260	0/0:29,0:29:81.26:0,81,1044	0/0:8,0:8:21.07:0,21,273
chr10	78267102	.	C	CGT	1002.41	PASS	AB=0.902;AC=24;AF=0.462;AN=52;BaseQRankSum=0.245;DP=695;FS=12.298;HRun=0;HaplotypeScore=142.6238;InbreedingCoeff=0.3749;MQ=61.13;MQ0=8;MQRankSum=-0.024;QD=2.65;ReadPosRankSum=-2.007;VQSLOD=1.3428;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:26.79:0,27,271	0/0:8,0:9:2.84:0,3,14	./.	./.	0/1:16,0:25:0:0,0,0	0/1:19,1:21:29.60:30,0,65	0/0:24,0:27:25.91:0,26,202	0/1:43,0:43:0:0,0,0	0/0:21,0:21:17.26:0,17,168	0/0:22,0:25:8.52:0,9,42	0/0:16,0:21:6.57:0,7,30	0/1:18,3:23:27.25:38,0,27	1/1:17,5:22:3.01:44,3,0	0/0:17,0:19:2.65:0,3,14	0/0:12,0:16:7.57:0,8,29	0/0:25,0:26:23.89:0,24,240	0/0:31,1:32:27.13:0,27,310	1/1:14,0:15:11.92:108,12,0	1/1:11,0:11:9:87,9,0	1/1:18,2:29:5.25:53,5,0	1/1:35,0:35:18.49:199,18,0	1/1:21,5:28:2.63:44,3,0	0/1:23,6:30:31.26:118,0,31	0/1:34,11:49:70.73:271,0,71	0/0:19,0:18:14.94:0,15,161	1/1:28,1:30:1.81:128,2,0	1/1:13,0:11:3:27,3,0	1/1:1,0:1:2.94:18,3,0
chr10	78267581	.	TATGTATTCATTC	T	837.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.545;DP=741;FS=0.000;HRun=0;HaplotypeScore=242.0979;InbreedingCoeff=0.9960;MQ=72.01;MQ0=0;MQRankSum=-3.577;QD=55.80;ReadPosRankSum=0.843;VQSLOD=2.5779;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.12:0,90,4306	0/0:12,0:12:36.12:0,36,1905	0/0:18,0:18:38.24:0,38,1596	0/0:12,0:12:23.12:0,23,999	0/0:36,0:36:99:0,108,5614	0/0:24,0:24:72.22:0,72,3755	0/0:25,0:25:75.16:0,75,3538	0/0:29,0:29:84.27:0,84,4271	0/0:26,0:26:75.20:0,75,3885	0/0:33,0:33:96.25:0,96,4670	0/0:25,0:25:72.25:0,72,4234	0/0:23,0:23:66.11:0,66,3379	0/0:30,0:30:90.28:0,90,4989	0/0:30,0:30:90.28:0,90,5199	0/0:30,0:30:87.22:0,87,4463	0/0:25,0:25:72.21:0,72,3618	0/0:26,0:26:75.22:0,75,4183	1/1:0,15:15:27.05:931,27,0	0/0:24,0:24:72.21:0,72,3303	0/0:38,0:38:99:0,114,5786	0/0:27,0:27:81.22:0,81,4186	0/0:29,0:29:81.25:0,81,4516	0/0:27,0:27:81.23:0,81,4212	0/0:12,0:12:36.11:0,36,1838	0/0:37,0:37:99:0,108,6145	0/0:44,0:44:99:0,132,7361	0/0:38,0:38:99:0,111,6068	0/0:13,0:13:36.12:0,36,2059
chr10	78267977	.	G	GCC	902.10	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.601;DP=670;FS=0.000;HRun=5;HaplotypeScore=78.3506;InbreedingCoeff=0.9035;MQ=80.88;MQ0=1;MQRankSum=-1.694;QD=39.22;ReadPosRankSum=1.055;VQSLOD=3.0016;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,1436	0/0:19,0:19:57.18:0,57,726	0/0:21,0:21:56.77:0,57,696	0/0:12,0:12:24.01:0,24,273	0/0:34,0:34:81.25:0,81,1032	0/0:25,0:25:66.21:0,66,840	0/0:19,0:19:54.17:0,54,688	0/0:30,0:30:75.23:0,75,955	0/0:20,0:20:60.19:0,60,765	0/0:40,0:40:99:0,111,1404	0/0:30,0:30:84.27:0,84,1071	0/0:19,0:19:48.15:0,48,612	0/0:23,0:23:63.20:0,63,801	0/0:29,0:29:81.26:0,81,1030	0/0:35,0:35:99:0,102,1299	0/0:25,0:25:66.19:0,66,827	0/0:15,0:15:39.12:0,39,497	1/1:1,22:22:57.20:997,57,0	0/0:15,0:15:39.11:0,39,486	0/0:35,0:35:96.31:0,96,1223	0/0:22,0:22:60.19:0,60,765	0/0:26,0:26:78.25:0,78,994	0/0:23,0:23:66.21:0,66,841	0/0:16,0:16:44.85:0,45,573	0/0:24,0:24:63.18:0,63,787	0/0:27,0:27:78.25:0,78,994	0/0:20,0:20:57.18:0,57,726	0/0:2,0:2:6.02:0,6,76
chr10	78268065	.	CCACCA	C	152.48	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.395;DP=646;FS=0.000;HRun=0;HaplotypeScore=118.4760;InbreedingCoeff=0.9513;MQ=78.39;MQ0=0;MQRankSum=-2.538;QD=12.71;ReadPosRankSum=-2.231;VQSLOD=2.7068;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,163,4759	0/0:16,0:16:45.15:0,45,1342	0/0:15,0:16:39:0,39,789	0/0:19,0:19:48.15:0,48,1144	0/0:28,0:28:81.28:0,81,2327	0/0:24,0:24:66.21:0,66,1858	0/0:20,0:20:51.17:0,51,1462	0/0:23,0:23:54.14:0,54,1390	0/0:21,0:21:63.22:0,63,1854	0/0:24,0:24:66.23:0,66,1974	0/0:26,0:26:69.24:0,69,1874	0/0:21,0:21:57.16:0,57,1569	0/0:19,0:19:54.17:0,54,1440	0/0:31,0:31:90.29:0,90,2622	0/0:33,0:33:96.32:0,96,2771	0/0:34,0:34:96.33:0,96,2860	0/0:15,0:15:42.14:0,42,1226	1/1:7,5:12:10.28:237,10,0	0/0:14,0:14:36.12:0,36,1067	0/0:28,0:28:78.27:0,78,2306	0/0:22,0:22:63.18:0,63,1768	0/0:15,0:15:42.14:0,42,1232	0/0:28,0:28:78.27:0,78,2279	0/0:16,0:16:45.15:0,45,1350	0/0:20,0:20:60.21:0,60,1726	0/0:23,0:23:66.23:0,66,1977	0/0:35,0:35:99:0,99,2954	0/0:8,0:8:24.08:0,24,718
chr10	78268915	.	GA	G	8590.07	PASS	AB=0.950;AC=43;AF=0.768;AN=56;BaseQRankSum=-3.012;DP=580;FS=8.808;HRun=10;HaplotypeScore=81.1787;InbreedingCoeff=0.8584;MQ=72.22;MQ0=2;MQRankSum=1.299;QD=19.93;ReadPosRankSum=2.838;VQSLOD=5.5558;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:33:79.74:0,80,417	1/1:0,5:5:12:104,12,0	0/0:22,1:17:11.76:0,12,91	0/1:18,1:15:12.43:12,0,106	1/1:5,17:22:47.96:411,48,0	1/1:1,33:34:92.98:807,93,0	1/1:3,18:21:18.23:384,18,0	0/0:34,0:35:84.42:0,84,894	1/1:2,12:14:29.99:260,30,0	1/1:4,23:27:59.94:516,60,0	1/1:2,19:21:50.97:442,51,0	1/1:1,12:13:32.99:287,33,0	1/1:2,19:21:22.56:411,23,0	1/1:1,16:17:41.99:364,42,0	1/1:1,18:19:47.99:417,48,0	1/1:3,12:15:13.08:286,13,0	1/1:1,26:27:68.98:599,69,0	0/0:3,0:22:54.48:0,54,271	1/1:5,21:26:62.97:545,63,0	1/1:2,21:22:53.98:469,54,0	1/1:2,18:20:50.99:443,51,0	1/1:1,10:11:32.03:266,32,0	1/1:3,15:18:41.99:365,42,0	1/1:1,7:8:15:130,15,0	1/1:2,21:23:62.99:547,63,0	0/0:19,2:21:5.05:0,5,511	1/1:6,21:27:42.53:524,43,0	0/0:14,0:14:30.08:0,30,326
chr10	78271237	.	C	CAT	5754.20	PASS	AB=1.000;AC=40;AF=0.741;AN=54;BaseQRankSum=-5.812;DP=280;FS=7.034;HRun=0;HaplotypeScore=77.2964;InbreedingCoeff=0.6810;MQ=48.71;MQ0=3;MQRankSum=-1.041;QD=28.49;ReadPosRankSum=-0.401;VQSLOD=5.8140;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:36.12:0,36,479	1/1:0,3:4:8.96:156,9,0	./.	0/0:16,0:5:4.77:0,5,24	1/1:5,9:14:11.94:208,12,0	0/0:12,0:12:6:0,6,63	0/0:5,0:5:6:0,6,63	1/1:5,48:53:99:2066,132,0	0/0:9,0:9:5.88:0,6,54	1/1:2,6:7:15.05:254,15,0	1/1:1,4:5:15.05:260,15,0	1/1:1,6:7:12.04:208,12,0	1/1:4,7:10:21.06:337,21,0	1/1:1,2:3:6.02:104,6,0	1/1:3,2:5:12.01:154,12,0	0/1:6,0:6:0:0,0,0	0/0:10,0:10:11.92:0,12,108	1/1:5,4:9:14.64:186,15,0	1/1:8,3:11:21.06:311,21,0	1/1:4,4:7:14.84:221,15,0	1/1:1,5:6:6.02:104,6,0	1/1:0,6:6:12.04:208,12,0	1/1:2,5:7:9.03:156,9,0	1/1:1,1:2:3.01:52,3,0	0/1:7,0:7:0:0,0,0	1/1:7,5:12:9.43:337,9,0	1/1:8,7:15:5.44:331,5,0	1/1:0,3:3:6.02:103,6,0
chr10	78271245	.	C	CAT	512.94	PASS	AB=0.940;AC=38;AF=0.704;AN=54;BaseQRankSum=0.575;DP=274;FS=5.229;HRun=0;HaplotypeScore=101.8568;InbreedingCoeff=0.1594;MQ=46.67;MQ0=9;MQRankSum=-0.687;QD=2.39;ReadPosRankSum=3.662;VQSLOD=1.6485;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:39.11:0,39,488	1/1:4,0:4:3.26:8,3,0	./.	0/0:21,0:6:7.62:0,8,40	1/1:11,0:11:4.11:10,4,0	1/1:9,0:11:2.99:24,3,0	1/1:5,0:5:3:25,3,0	0/1:55,0:54:99:149,0,265	1/1:7,0:7:2.82:14,3,0	0/0:6,0:5:6.92:0,7,19	1/1:5,0:5:4.79:11,5,0	1/1:7,0:7:4.26:10,4,0	1/1:13,0:12:6.34:15,6,0	1/1:2,0:2:2.13:5,2,0	0/0:5,0:5:0.18:0,0,33	0/1:5,0:6:0:0,0,0	0/1:10,0:10:2.07:39,0,2	1/1:9,0:9:4.72:30,5,0	0/1:10,0:9:8.32:8,0,22	0/1:8,0:7:4.67:5,0,14	1/1:5,0:5:1.77:4,2,0	1/1:6,0:6:4.26:10,4,0	1/1:7,0:7:3.38:8,3,0	1/1:2,0:2:0.89:2,1,0	0/1:6,0:7:0:0,0,0	0/1:8,3:11:16.39:199,0,16	0/1:11,0:11:26.57:27,0,33	1/1:2,1:3:4.56:48,5,0
chr10	78271253	.	TAC	T	134.14	PASS	AB=0.975;AC=12;AF=0.231;AN=52;BaseQRankSum=4.237;DP=283;FS=3.572;HRun=0;HaplotypeScore=107.3979;InbreedingCoeff=0.3378;MQ=43.70;MQ0=13;MQRankSum=-1.045;QD=1.89;ReadPosRankSum=-0.790;VQSLOD=1.8225;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:42.06:0,42,639	0/0:4,0:4:9:0,9,105	./.	0/0:24,0:6:5.07:0,5,23	0/0:11,0:11:17.39:0,17,226	1/1:10,2:14:2.91:24,3,0	1/1:4,0:4:2.99:24,3,0	0/0:58,0:54:99:0,142,2125	1/1:1,4:6:3.01:42,3,0	0/0:5,0:4:12.04:0,12,220	0/0:5,0:5:15.03:0,15,243	0/0:7,0:7:12.03:0,12,189	0/0:12,0:11:18.05:0,18,293	0/0:3,0:3:9.01:0,9,134	0/0:4,0:4:12.01:0,12,158	0/1:6,0:6:0.02:0,0,0	1/1:6,5:12:8.85:88,9,0	0/1:8,1:9:43.56:54,0,44	0/1:11,0:9:29.10:31,0,29	0/1:9,0:8:1.60:2,0,112	0/0:3,0:3:6.02:0,6,110	0/0:6,0:6:12.03:0,12,189	0/0:7,0:7:9.02:0,9,134	0/0:2,0:2:3.01:0,3,55	./.	0/0:11,0:10:2.43:0,2,154	0/0:10,0:10:4.68:0,5,203	0/0:2,0:2:2.99:0,3,23
chr10	78271257	.	C	CAT	166.85	PASS	AB=0.905;AC=8;AF=0.167;AN=48;BaseQRankSum=4.212;DP=282;FS=1.178;HRun=0;HaplotypeScore=109.7872;InbreedingCoeff=0.2387;MQ=42.88;MQ0=14;MQRankSum=-1.483;QD=2.11;ReadPosRankSum=1.194;VQSLOD=2.2587;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:33.05:0,33,407	0/0:4,0:4:3.01:0,3,38	./.	0/1:25,0:5:0.45:4,0,0	0/0:11,0:11:15.05:0,15,190	./.	./.	0/0:59,0:54:99:0,126,1371	1/1:6,0:6:2.20:7,2,0	0/0:5,0:4:12.04:0,12,156	0/0:5,0:5:12.04:0,12,154	0/0:7,0:7:9.03:0,9,115	0/0:13,0:12:11.96:0,12,151	0/0:4,0:4:12.03:0,12,140	0/0:4,0:4:9.03:0,9,116	0/1:7,0:7:0:0,0,0	0/1:12,0:12:1.91:2,0,34	0/1:4,5:9:6.28:64,0,6	0/0:9,0:7:16.24:0,16,116	0/0:9,0:8:6.01:0,6,64	0/0:2,0:2:6.02:0,6,77	0/0:6,0:6:9.03:0,9,115	0/0:7,0:7:6.02:0,6,76	0/0:2,0:2:3.01:0,3,38	0/1:9,0:9:0:0,0,0	0/1:8,3:10:17.88:185,0,18	0/0:8,0:9:14.97:0,15,130	./.
chr10	78271267	.	CAT	C	40.05	PASS	AB=0.968;AC=11;AF=0.229;AN=48;BaseQRankSum=3.965;DP=259;FS=3.087;HRun=0;HaplotypeScore=100.5127;InbreedingCoeff=0.2409;MQ=40.04;MQ0=15;MQRankSum=-1.905;QD=0.53;ReadPosRankSum=0.317;VQSLOD=1.7114;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:30.10:0,30,542	0/0:2,0:2:3.01:0,3,58	./.	0/0:20,0:3:2.80:0,3,13	0/0:9,0:9:14.36:0,14,211	0/1:14,1:15:0:0,0,0	./.	0/0:51,0:46:99:0,117,1966	1/1:5,0:5:3.01:32,3,0	0/0:5,0:4:12.04:0,12,230	0/0:5,0:5:15.05:0,15,273	0/0:6,0:6:9.03:0,9,174	0/1:12,0:11:20.21:20,0,214	0/0:8,0:8:24.08:0,24,423	0/0:4,0:4:11.53:0,12,180	0/1:7,0:7:0.02:0,0,0	1/1:10,1:11:5.19:27,5,0	1/1:8,1:9:2.03:31,2,0	0/1:8,1:7:18.39:31,0,18	0/0:6,0:5:3.01:0,3,58	0/0:2,0:2:6.02:0,6,116	0/0:4,0:4:9.03:0,9,165	0/0:8,0:8:6.02:0,6,116	0/0:3,0:3:3.01:0,3,47	./.	0/0:12,0:11:3.71:0,4,44	0/1:8,0:8:18.67:19,0,176	./.
chr10	78271277	.	CATATAT	C	321.13	PASS	AB=0.816;AC=16;AF=0.400;AN=40;BaseQRankSum=3.449;DP=252;FS=3.987;HRun=0;HaplotypeScore=104.4688;InbreedingCoeff=0.1294;MQ=41.20;MQ0=14;MQRankSum=-1.451;QD=2.17;ReadPosRankSum=0.022;VQSLOD=1.8624;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:21:0,21,378	0/0:3,0:3:3:0,3,25	./.	0/0:20,0:2:0.47:0,0,1	0/0:3,2:9:4.86:0,5,78	1/1:4,9:15:2.92:39,3,0	./.	0/1:41,0:34:19.26:19,0,54	./.	./.	0/0:5,0:5:3.01:0,3,37	0/0:6,0:8:0:0,0,0	1/1:4,0:11:3:26,3,0	0/0:8,0:8:21.07:0,21,620	0/0:2,0:4:5:0,5,76	0/0:2,4:7:0.47:0,0,1	0/1:12,0:13:20.90:38,0,21	0/1:11,0:10:34.14:36,0,34	1/1:3,0:8:14.82:168,15,0	1/1:3,0:5:1.25:3,1,0	./.	./.	1/1:3,0:11:0.47:1,0,0	./.	0/1:3,6:10:0:0,0,0	0/1:5,0:11:44.40:68,0,44	0/1:6,0:9:4.94:36,0,5	./.
chr10	78271359	.	GACAGAGATAATGTC	G	5805.73	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.022;DP=497;FS=0.000;HRun=0;HaplotypeScore=195.3128;InbreedingCoeff=0.9462;MQ=81.62;MQ0=0;MQRankSum=-10.663;QD=100.10;ReadPosRankSum=1.449;VQSLOD=4.5693;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.20:0,57,3614	0/0:5,0:5:15.05:0,15,996	0/0:17,0:17:39.13:0,39,1937	0/0:13,0:13:36.12:0,36,1863	0/0:12,0:12:36.12:0,36,2355	0/0:26,0:26:66.23:0,66,4498	0/0:16,0:16:48.16:0,48,3098	0/0:47,0:47:99:0,135,7972	0/0:20,0:20:60.21:0,60,4196	0/0:19,0:19:57.20:0,57,3911	0/0:15,0:15:39.13:0,39,2588	0/0:25,0:25:72.25:0,72,4701	0/0:30,0:30:81.28:0,81,5662	0/0:17,0:17:48.16:0,48,3356	0/0:14,0:14:39.13:0,39,2700	0/0:17,0:17:48.16:0,48,3360	0/0:25,0:25:75.26:0,75,4992	0/0:16,0:16:48.16:0,48,3025	1/1:3,2:5:9.01:275,9,0	1/1:2,15:17:42.14:1759,42,0	1/1:2,3:5:6.02:250,6,0	0/0:12,0:12:36.12:0,36,2478	0/0:18,0:18:45.15:0,45,3149	0/0:16,0:16:42.14:0,42,2939	0/0:17,0:16:45.15:0,45,3150	0/0:17,0:17:51.18:0,51,3293	1/1:3,27:31:84.29:3521,84,0	0/0:6,0:6:18.06:0,18,1259
chr10	78271673	.	CCA	C	5816.96	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.545;DP=679;FS=3.743;HRun=0;HaplotypeScore=83.2522;InbreedingCoeff=0.9768;MQ=79.86;MQ0=1;MQRankSum=1.262;QD=44.40;ReadPosRankSum=1.243;VQSLOD=6.4819;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,2040	1/1:0,6:6:18.06:278,18,0	0/0:14,0:14:36.60:0,37,766	0/0:18,0:18:54.18:0,54,1036	1/1:0,23:23:60.20:975,60,0	0/0:29,0:29:84.27:0,84,1669	0/0:33,0:33:99:0,99,2011	0/0:33,0:33:96.33:0,96,1931	0/0:21,0:21:63.22:0,63,1269	1/1:0,26:26:72.22:1140,72,0	1/1:0,16:16:45.15:734,45,0	0/0:37,0:37:99:0,108,2180	0/0:37,0:37:99:0,111,2179	1/1:0,26:25:75.26:1223,75,0	1/1:0,34:34:90.31:1468,90,0	0/0:27,0:27:81.28:0,81,1646	0/0:26,0:26:78.27:0,78,1585	0/0:29,0:29:84.29:0,84,1682	0/0:18,0:18:51.18:0,51,1037	0/0:19,0:19:51.15:0,51,1034	0/0:35,0:35:99:0,105,2083	0/0:23,0:23:66.23:0,66,1326	0/0:11,0:11:33.11:0,33,668	0/0:40,0:40:99:0,120,2438	0/0:8,0:8:24.07:0,24,454	0/0:26,0:26:29.35:0,29,1434	0/0:24,0:24:72.25:0,72,1462	0/0:2,0:2:6.02:0,6,122
chr10	78272934	.	GCACA	G	3783.61	PASS	AB=0.641;AC=13;AF=0.232;AN=56;BaseQRankSum=-4.014;DP=635;FS=1.622;HRun=0;HaplotypeScore=141.8370;InbreedingCoeff=0.7706;MQ=62.69;MQ0=5;MQRankSum=4.023;QD=22.66;ReadPosRankSum=3.085;VQSLOD=3.4680;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:40:44.61:0,45,994	0/0:5,0:7:6.02:0,6,101	0/0:31,0:19:6.02:0,6,144	0/0:22,0:14:12.04:0,12,212	0/0:10,0:20:24.01:0,24,392	1/1:8,16:25:45.15:700,45,0	1/1:10,12:22:30.10:480,30,0	0/0:22,0:25:23.50:0,23,369	1/1:2,9:14:33.09:468,33,0	0/0:15,0:25:51.17:0,51,928	0/0:4,0:9:6.70:0,7,153	0/0:22,0:31:27.09:0,27,473	0/0:12,0:20:18.06:0,18,314	0/0:13,0:24:21.07:0,21,383	0/0:10,0:28:42.14:0,42,732	1/1:7,16:24:45.15:690,45,0	1/1:13,17:30:42.14:672,42,0	0/1:11,2:25:64.77:65,0,192	0/0:11,0:17:24:0,24,404	0/0:7,0:10:9.03:0,9,166	0/0:21,0:31:6.02:0,6,90	0/0:16,0:28:26.56:0,27,403	0/0:9,0:15:8.53:0,9,122	0/0:16,0:27:17.92:0,18,328	1/1:7,17:25:48.14:708,48,0	0/0:16,0:25:3.63:0,4,747	0/0:11,0:23:30.10:0,30,535	0/0:1,0:6:15.05:0,15,262
chr10	78273324	.	T	TCTC	5536.64	PASS	AB=0.925;AC=33;AF=0.589;AN=56;BaseQRankSum=9.277;DP=537;FS=6.478;HRun=0;HaplotypeScore=168.9099;InbreedingCoeff=0.6814;MQ=58.55;MQ0=5;MQRankSum=-9.095;QD=16.73;ReadPosRankSum=-3.381;VQSLOD=3.4630;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:41.31:0,41,602	1/1:2,3:5:6.02:108,6,0	0/0:19,0:11:6.91:0,7,87	0/0:18,0:11:11.15:0,11,114	1/1:13,6:19:30.10:553,30,0	0/0:20,0:20:33.06:0,33,433	0/0:23,0:23:18.81:0,19,475	1/1:43,0:43:8.55:106,9,0	0/0:15,0:15:27.04:0,27,342	1/1:17,10:27:15.12:1025,15,0	1/1:6,6:12:27.08:494,27,0	0/1:11,0:12:15.19:73,0,15	1/1:19,0:20:15.93:174,16,0	1/1:13,6:19:36.07:630,36,0	1/1:10,12:22:42.14:822,42,0	0/0:23,0:23:36.10:0,36,473	0/0:29,0:29:44.94:0,45,632	0/0:8,0:8:3:0,3,25	1/1:22,0:25:24.53:283,25,0	1/1:9,0:15:29.31:369,29,0	0/1:21,0:22:0.12:77,0,0	0/1:23,0:26:6.81:137,0,7	1/1:16,0:18:1.66:87,2,0	1/1:11,0:12:5.75:91,6,0	0/0:25,0:24:21.04:0,21,299	1/1:12,0:11:8.96:99,9,0	1/1:12,0:17:37.29:408,37,0	1/1:5,0:5:0.89:2,1,0
chr10	78273346	.	CTTG	C	1875.43	PASS	AB=0.954;AC=19;AF=0.339;AN=56;BaseQRankSum=3.846;DP=505;FS=2.494;HRun=0;HaplotypeScore=159.6146;InbreedingCoeff=-0.2334;MQ=48.00;MQ0=12;MQRankSum=-5.666;QD=6.58;ReadPosRankSum=-3.943;VQSLOD=2.2747;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:62.62:0,63,1117	0/0:5,0:4:6.02:0,6,69	0/0:30,0:6:6.87:0,7,155	0/1:24,0:11:6.67:7,0,184	0/1:21,2:23:44.63:45,0,165	0/0:23,0:23:60.16:0,60,1016	0/0:23,0:23:10.47:0,10,994	0/1:23,4:27:99:181,0,334	0/0:13,0:12:30.05:0,30,523	0/0:26,2:28:28.46:0,28,541	0/1:15,0:15:42.01:42,0,181	0/1:8,0:8:61.68:90,0,62	0/1:12,0:11:92.15:92,0,96	0/1:17,1:17:37.71:38,0,217	0/0:20,0:20:1.28:0,1,236	0/0:15,0:15:39.11:0,39,748	0/0:23,0:23:54.18:0,54,1016	0/1:6,0:6:28.61:29,0,107	0/1:18,2:20:99:145,0,300	0/1:12,1:13:94.69:147,0,95	1/1:24,1:24:20.50:231,21,0	0/1:26,0:26:91.12:228,0,91	0/1:15,0:15:22.66:147,0,23	0/1:18,0:18:24.45:108,0,24	0/0:15,0:14:35.47:0,35,631	0/1:11,0:10:21.13:21,0,215	0/1:11,6:17:79.26:274,0,79	1/1:5,1:6:13.99:218,14,0
chr10	78273355	.	C	CTCT	9479.69	PASS	AB=0.792;AC=34;AF=0.607;AN=56;BaseQRankSum=3.264;DP=488;FS=6.859;HRun=0;HaplotypeScore=132.1804;InbreedingCoeff=0.6881;MQ=46.47;MQ0=12;MQRankSum=-7.163;QD=29.17;ReadPosRankSum=3.033;VQSLOD=4.7645;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:51.02:0,51,747	1/1:3,1:3:6.01:63,6,0	0/0:29,0:5:8.84:0,9,100	0/0:29,0:12:10.20:0,10,155	1/1:22,1:23:41.70:426,42,0	0/0:24,0:24:60.11:0,60,854	0/1:22,0:22:2.01:2,0,699	1/1:12,14:25:41.60:636,42,0	0/0:10,0:9:23.98:0,24,290	1/1:19,8:27:77.83:1079,78,0	1/1:15,1:16:38.89:425,39,0	0/1:5,4:9:22.86:256,0,23	1/1:10,5:14:13.71:390,14,0	1/1:17,1:17:41.54:396,42,0	1/1:11,4:15:41.90:598,42,0	0/0:11,0:11:33.05:0,33,452	0/0:20,0:20:45.02:0,45,584	0/0:5,0:5:11.92:0,12,139	1/1:3,15:19:39.69:800,40,0	1/1:2,12:14:30.02:722,30,0	1/1:5,15:20:30.04:676,30,0	1/1:7,15:22:15.66:978,16,0	1/1:6,10:18:1.29:356,1,0	0/1:6,12:18:1.63:458,0,2	0/0:14,0:13:36.05:0,36,529	1/1:4,7:11:24.03:502,24,0	1/1:7,13:20:16.07:596,16,0	0/1:6,1:7:51.90:121,0,52
chr10	78273368	.	TCTTCTC	T	1565.57	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=5.674;DP=493;FS=10.545;HRun=0;HaplotypeScore=167.1448;InbreedingCoeff=0.8846;MQ=48.89;MQ0=14;MQRankSum=-4.734;QD=15.35;ReadPosRankSum=0.537;VQSLOD=2.6579;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:33.68:0,34,1272	./.	0/0:42,0:5:7.27:0,7,146	0/0:41,0:14:23.11:0,23,441	1/1:19,2:21:45.99:334,46,0	0/0:21,0:21:55.74:0,56,1530	0/0:23,0:23:51.89:0,52,1382	0/0:24,0:22:31.92:0,32,813	0/0:9,0:9:15.05:0,15,407	1/1:24,1:25:44.22:547,44,0	1/1:13,1:14:35.53:322,36,0	0/0:11,0:11:18.06:0,18,490	0/0:15,0:14:27.06:0,27,635	1/1:12,0:11:26.16:199,26,0	1/1:17,1:17:29.27:335,29,0	0/0:8,0:8:12.03:0,12,272	0/1:12,0:12:1.60:2,0,394	0/0:7,0:7:15.05:0,15,375	0/0:18,0:17:36.10:0,36,1008	0/0:19,0:19:45.10:0,45,995	0/0:16,0:16:27.09:0,27,657	0/0:25,0:25:60.15:0,60,1332	0/0:17,0:17:34.65:0,35,674	0/0:19,0:19:39.04:0,39,731	0/0:14,0:14:36.12:0,36,1003	0/0:13,0:13:33.11:0,33,916	0/0:22,0:22:32.85:0,33,735	0/0:3,0:3:9.03:0,9,208
chr10	78273371	.	TCTC	T	3128.94	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=7.050;DP=486;FS=8.201;HRun=0;HaplotypeScore=137.0456;InbreedingCoeff=0.4829;MQ=50.26;MQ0=12;MQRankSum=-6.794;QD=17.29;ReadPosRankSum=-1.697;VQSLOD=2.8587;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:51.71:0,52,1065	./.	0/0:43,0:5:10.90:0,11,139	0/0:44,0:16:29.51:0,30,368	1/1:5,17:22:50.82:657,51,0	0/0:21,0:21:63.14:0,63,1244	0/0:21,0:21:46.15:0,46,986	0/1:18,0:16:23.64:24,0,529	0/0:6,0:6:18.05:0,18,303	1/1:11,14:25:72.10:946,72,0	1/1:3,11:14:39.05:566,39,0	0/0:11,0:11:18.06:0,18,330	0/1:15,0:15:15.95:16,0,341	1/1:1,11:11:30.10:480,30,0	1/1:11,7:17:45.05:551,45,0	0/0:9,0:9:23.97:0,24,386	0/0:11,0:11:12.57:0,13,435	0/0:8,0:8:17.98:0,18,268	0/1:19,0:18:34.52:35,0,730	0/0:20,0:20:1.88:0,2,633	0/1:17,0:17:18.38:18,0,446	0/0:23,0:23:17.38:0,17,885	0/0:16,0:16:8.36:0,8,393	0/0:18,0:18:32.87:0,33,538	0/0:13,0:13:39.11:0,39,739	0/0:13,0:13:33.11:0,33,595	0/1:21,0:21:18.33:18,0,424	0/0:3,0:3:9.03:0,9,173
chr10	78273419	.	TCTC	T	1051.63	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=8.943;DP=467;FS=9.592;HRun=0;HaplotypeScore=100.3346;InbreedingCoeff=0.7922;MQ=50.82;MQ0=17;MQRankSum=-7.409;QD=12.09;ReadPosRankSum=-1.201;VQSLOD=2.5699;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:49.39:0,49,865	0/0:2,0:2:6.02:0,6,126	0/0:33,0:2:3.90:0,4,65	0/0:54,0:16:9.10:0,9,124	0/0:19,0:19:33.11:0,33,659	0/0:26,0:26:61.34:0,61,1172	0/0:22,0:21:51.13:0,51,909	0/0:22,0:21:55.37:0,55,924	0/0:6,0:6:15.05:0,15,277	0/0:22,0:21:48.10:0,48,895	0/0:11,0:11:15.05:0,15,302	1/1:10,0:10:14.97:147,15,0	1/1:11,1:12:29.73:266,30,0	0/0:14,0:14:27.08:0,27,506	0/0:13,0:13:36.11:0,36,696	0/0:7,0:7:21.07:0,21,428	0/0:12,0:11:20.69:0,21,437	0/0:10,0:10:24.08:0,24,412	0/0:18,0:15:42.09:0,42,707	0/0:17,0:17:45.15:0,45,904	0/0:22,1:23:38.01:0,38,709	1/1:18,1:19:32.31:276,32,0	1/1:10,1:10:17.84:169,18,0	1/1:8,4:12:26.99:293,27,0	0/0:14,0:14:39.12:0,39,770	0/1:22,0:20:75.58:76,0,111	0/0:12,0:12:24.08:0,24,488	0/0:3,0:3:5.97:0,6,45
chr10	78273421	.	TCCTCCTCCTCCC	T	2480.92	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=7.519;DP=468;FS=10.883;HRun=0;HaplotypeScore=153.5870;InbreedingCoeff=0.8166;MQ=50.54;MQ0=20;MQRankSum=-6.170;QD=29.53;ReadPosRankSum=-0.650;VQSLOD=2.5889;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:52.67:0,53,2036	0/0:2,0:2:6.02:0,6,288	0/0:35,0:3:8.68:0,9,209	0/0:52,0:17:15.71:0,16,252	0/0:18,0:18:33.11:0,33,1528	0/0:25,0:25:60.87:0,61,2320	0/0:23,0:21:51.13:0,51,1655	0/0:24,0:23:62.85:0,63,1577	0/0:5,0:5:15.05:0,15,630	0/0:22,0:21:51.07:0,51,1890	0/0:11,0:11:15.05:0,15,557	1/1:2,8:10:15.04:334,15,0	1/1:4,9:12:30.10:842,30,0	0/0:13,0:13:27.08:0,27,1028	0/0:13,0:13:36.11:0,36,1584	0/0:7,0:7:21.07:0,21,1022	0/0:12,0:11:23.20:0,23,1059	0/0:12,0:11:27.09:0,27,862	0/0:19,0:15:42.12:0,42,1378	0/0:17,0:17:45.15:0,45,1838	0/0:23,0:23:40.86:0,41,1606	1/1:7,10:17:33.11:603,33,0	1/1:5,5:9:18.06:342,18,0	1/1:10,4:14:26.96:458,27,0	0/0:14,0:14:39.12:0,39,1770	0/1:20,0:18:77.53:78,0,114	0/0:12,0:12:24.08:0,24,1244	0/0:3,0:3:5.79:0,6,36
chr10	78273424	.	TCCTCCTCCC	T	1365.39	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.653;DP=474;FS=9.152;HRun=0;HaplotypeScore=136.2017;InbreedingCoeff=0.8959;MQ=50.12;MQ0=25;MQRankSum=-7.567;QD=15.69;ReadPosRankSum=-1.348;VQSLOD=1.5307;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:33.93:0,34,1295	0/0:3,0:3:9.03:0,9,264	0/0:36,0:4:7.05:0,7,171	0/0:53,0:16:10.44:0,10,201	0/0:18,0:18:27.09:0,27,1009	0/0:25,0:25:45.85:0,46,1377	0/0:24,0:21:33.07:0,33,948	0/0:23,0:22:36.58:0,37,705	0/0:6,0:5:9.03:0,9,414	0/0:22,0:20:36.08:0,36,1197	0/0:10,0:10:9.03:0,9,310	1/1:10,0:10:11.75:127,12,0	1/1:14,0:12:26.30:400,26,0	0/0:13,0:13:18.06:0,18,584	0/0:13,0:13:30.10:0,30,1035	0/0:8,0:8:21.07:0,21,750	0/0:12,0:11:19.31:0,19,675	0/0:12,0:11:15.05:0,15,490	0/0:18,0:15:30.08:0,30,751	0/0:17,0:17:39.13:0,39,1129	0/0:25,0:25:38.10:0,38,1005	1/1:14,0:14:21.68:116,22,0	1/1:11,0:10:11.84:80,12,0	1/1:14,0:14:8.96:124,9,0	0/0:14,0:14:30.10:0,30,1159	1/1:8,13:19:29.45:615,29,0	0/0:13,0:13:24.08:0,24,821	1/1:3,0:3:6.02:90,6,0
chr10	78273455	.	CCTCTCTCTCT	C	206.68	PASS	AC=8;AF=0.235;AN=34;BaseQRankSum=1.280;DP=470;FS=0.000;HRun=0;HaplotypeScore=116.9218;InbreedingCoeff=0.3859;MQ=44.41;MQ0=27;MQRankSum=-2.436;QD=3.28;ReadPosRankSum=-1.197;VQSLOD=2.0918;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:20:3.01:0,3,96	./.	./.	./.	./.	0/0:16,0:16:0.89:0,1,2	0/0:19,0:16:6.02:0,6,166	./.	./.	1/1:15,0:14:3.01:74,3,0	./.	0/0:11,0:10:0.47:0,0,1	./.	1/1:12,0:12:6.02:115,6,0	1/1:14,5:17:3.01:88,3,0	0/0:11,0:11:12.04:0,12,300	0/0:8,0:8:6.01:0,6,92	0/0:13,0:12:0.47:0,0,1	1/1:16,0:14:3:29,3,0	./.	0/0:25,0:23:1.82:0,2,5	0/0:19,0:19:3.01:0,3,96	./.	0/0:18,0:19:3.01:0,3,71	0/0:10,0:10:0:0,0,0	0/0:17,0:16:3.01:0,3,129	0/0:11,0:11:2.60:0,3,10	./.
chr10	78274869	.	A	ATACCTGTAAACCAGTCTAAGGCC	72978.03	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=8.449;DP=760;FS=0.865;HRun=0;HaplotypeScore=413.9811;InbreedingCoeff=0.9997;MQ=77.12;MQ0=0;MQRankSum=-20.406;QD=200.49;ReadPosRankSum=-2.636;VQSLOD=3.9401;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.29:0,84,4332	1/1:11,1:13:36.08:2521,36,0	0/0:30,0:30:39.24:0,39,3206	0/0:15,0:15:36.09:0,36,1551	1/1:30,6:39:93.32:6158,93,0	0/0:34,0:34:96.33:0,96,5887	0/0:28,0:28:81.28:0,81,4596	1/1:37,0:37:99:6858,105,0	0/0:25,0:25:72.25:0,72,4112	1/1:33,5:40:99:8686,105,0	1/1:19,10:30:81.28:6163,81,0	0/0:20,0:20:60.21:0,60,3518	0/0:19,0:19:54.19:0,54,3117	1/1:22,8:31:87.30:7351,87,0	1/1:31,7:42:99:8448,111,0	0/0:24,0:24:66.22:0,66,3649	0/0:42,0:42:99:0,126,6913	0/0:22,0:22:60.19:0,60,3387	1/1:17,2:21:60.21:3596,60,0	1/1:23,4:29:78.27:5312,78,0	1/1:17,0:17:42.13:2497,42,0	0/0:24,0:24:66.23:0,66,3986	0/0:28,0:28:84.27:0,84,4761	0/0:30,0:30:81.28:0,81,4576	0/0:27,0:27:78.26:0,78,4594	1/1:18,6:29:81.23:6462,81,0	1/1:16,10:28:78.27:6687,78,0	1/1:4,4:8:24.08:2241,24,0
chr10	78275139	.	AG	A	15498.12	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=0.782;DP=678;FS=2.457;HRun=7;HaplotypeScore=74.6756;InbreedingCoeff=0.9858;MQ=84.19;MQ0=0;MQRankSum=-6.864;QD=26.86;ReadPosRankSum=4.631;VQSLOD=5.4764;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,1:52:99:0,117,1779	1/1:1,7:8:18.04:184,18,0	0/0:28,0:28:72.20:0,72,870	0/0:21,0:20:53.20:0,53,571	1/1:2,23:25:66.15:673,66,0	1/1:3,23:26:60.13:612,60,0	1/1:2,18:20:48.11:490,48,0	1/1:2,34:36:99:1040,102,0	1/1:0,16:16:41.92:428,42,0	1/1:1,26:27:78.15:786,78,0	1/1:2,14:16:39.09:397,39,0	1/1:1,23:24:69.15:704,69,0	1/1:2,23:25:60.13:612,60,0	1/1:3,10:13:27.06:275,27,0	1/1:1,36:37:99:1071,105,0	1/1:1,26:27:78.18:796,78,0	1/1:3,34:37:93.20:949,93,0	1/1:2,15:17:42.09:428,42,0	1/1:0,19:19:57.13:582,57,0	1/1:1,23:24:69.16:704,69,0	1/1:3,31:34:81.18:827,81,0	1/1:3,14:17:39.09:398,39,0	1/1:1,22:23:60.14:611,60,0	1/1:1,21:22:60.14:612,60,0	1/1:0,17:17:48.11:490,48,0	1/1:1,21:22:60.12:605,60,0	1/1:0,40:40:99:1101,108,0	1/1:0,5:5:12.03:122,12,0
chr10	78276055	.	GACACAC	G	1319.07	PASS	AB=0.874;AC=27;AF=0.500;AN=54;BaseQRankSum=5.302;DP=516;FS=10.398;HRun=0;HaplotypeScore=116.4009;InbreedingCoeff=0.5670;MQ=66.79;MQ0=5;MQRankSum=-2.999;QD=5.02;ReadPosRankSum=-0.623;VQSLOD=1.7062;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:21.05:0,21,533	1/1:5,0:7:7.74:41,8,0	0/0:32,0:20:0:0,0,0	./.	1/1:18,0:21:4.71:16,5,0	0/0:19,0:20:26.09:0,26,589	0/0:26,0:28:33.07:0,33,863	0/1:21,0:21:15.17:15,0,66	0/0:2,0:5:2.13:0,2,37	0/1:14,0:15:0.90:1,0,59	0/0:16,0:16:5.99:0,6,48	1/1:8,2:10:8.06:127,8,0	1/1:13,3:16:2.97:20,3,0	1/1:19,0:23:5.80:49,6,0	1/1:14,1:24:21.05:141,21,0	0/0:12,0:19:32.10:0,32,331	0/0:12,0:18:17.15:0,17,215	0/0:15,0:15:15.05:0,15,381	1/1:7,2:9:5.33:120,5,0	1/1:14,6:20:8.93:163,9,0	1/1:23,0:23:17.97:172,18,0	1/1:12,4:16:6.02:100,6,0	1/1:8,3:12:6.02:79,6,0	1/1:10,10:20:6.91:123,7,0	0/0:13,0:14:5.14:0,5,93	0/0:16,0:16:23.09:0,23,539	0/1:13,9:23:12.02:334,0,12	0/0:7,0:8:7.32:0,7,107
chr10	78276099	.	C	CACACACAT	85.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.580;DP=606;FS=3.125;HRun=0;HaplotypeScore=177.8912;InbreedingCoeff=0.7352;MQ=66.68;MQ0=15;MQRankSum=-1.855;QD=4.25;ReadPosRankSum=-0.408;VQSLOD=2.5052;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:53.76:0,54,479	0/0:11,0:10:20.57:0,21,221	0/0:34,0:21:55.32:0,55,520	0/0:29,0:16:31.74:0,32,291	0/0:18,0:18:47.33:0,47,386	0/0:35,0:35:74.85:0,75,719	0/0:31,0:31:61.99:0,62,870	0/0:33,0:31:55.47:0,55,624	0/0:19,0:19:50.86:0,51,513	0/0:20,0:20:53.05:0,53,351	0/0:6,0:6:14.62:0,15,89	0/0:12,0:12:20.81:0,21,257	0/0:14,0:14:29.86:0,30,229	0/0:13,0:11:17.87:0,18,209	0/0:23,0:23:59.52:0,60,689	0/0:24,0:24:45.10:0,45,593	0/0:27,0:27:72.29:0,72,808	1/1:5,11:20:6.02:165,6,0	0/0:18,0:15:44.98:0,45,463	0/0:12,0:12:27.02:0,27,380	0/0:30,0:29:53.92:0,54,444	0/0:19,0:19:43.18:0,43,383	0/0:10,0:10:20.93:0,21,203	0/0:29,0:29:37.72:0,38,397	0/0:22,0:20:46.79:0,47,407	0/0:17,0:17:37.84:0,38,408	0/0:30,0:30:60.50:0,61,615	0/0:20,0:19:4.36:0,4,327
chr10	78276508	.	GCACACACACACACACACACACA	G	1816.93	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=3.167;DP=555;FS=0.000;HRun=0;HaplotypeScore=328.3330;InbreedingCoeff=0.7897;MQ=61.24;MQ0=18;MQRankSum=-3.021;QD=16.22;ReadPosRankSum=-0.344;VQSLOD=1.2742;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:29:33.90:0,34,2336	0/0:5,0:5:6.02:0,6,613	./.	0/0:39,0:20:3.01:0,3,73	0/0:13,0:14:18.06:0,18,907	0/0:20,0:19:39.13:0,39,2857	0/0:19,0:19:15.63:0,16,873	1/1:14,6:19:15:188,15,0	0/0:16,0:24:28.04:0,28,1973	0/0:13,0:15:30.10:0,30,1953	0/0:13,0:13:6.02:0,6,443	0/0:8,0:18:33.11:0,33,860	0/0:9,0:15:15.05:0,15,403	0/0:14,0:14:30.08:0,30,1967	0/0:13,0:16:21.07:0,21,1672	0/0:14,0:22:26.73:0,27,2353	0/0:24,0:24:32.21:0,32,2316	0/0:23,0:22:40.95:0,41,3181	1/1:13,6:19:3.38:251,3,0	1/1:12,14:24:15.05:645,15,0	1/1:20,0:18:2.99:24,3,0	0/0:12,0:17:11.91:0,12,321	0/0:7,0:18:12.51:0,13,351	0/0:19,0:24:12.04:0,12,419	0/0:22,0:22:27.09:0,27,2138	0/0:19,0:18:30.09:0,30,2255	1/1:13,13:25:17.66:861,18,0	0/0:4,0:9:15.05:0,15,1332
chr10	78277027	.	C	CTTA	31132.87	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-10.212;DP=719;FS=2.785;HRun=0;HaplotypeScore=93.9049;InbreedingCoeff=0.9988;MQ=82.76;MQ0=0;MQRankSum=-10.601;QD=52.41;ReadPosRankSum=2.031;VQSLOD=7.1763;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.31:0,90,1433	1/1:1,13:14:39.13:860,39,0	0/0:26,0:26:69.21:0,69,1031	0/0:20,0:20:45.09:0,45,660	1/1:2,20:24:54.19:1191,54,0	0/0:26,0:26:72.23:0,72,1133	0/0:20,0:20:57.19:0,57,915	1/1:11,42:54:99:2781,129,0	1/1:4,30:34:93.32:1998,93,0	1/1:5,36:42:99:2348,111,0	1/1:2,17:20:45.15:991,45,0	1/1:2,27:30:78.27:1702,78,0	1/1:6,25:32:66.23:1453,66,0	1/1:3,17:20:45.15:959,45,0	1/1:7,32:40:99:2245,105,0	1/1:1,20:22:57.20:1258,57,0	1/1:1,17:18:51.18:1118,51,0	1/1:2,12:14:36.12:792,36,0	1/1:10,14:28:66.16:1235,66,0	1/1:5,25:30:75.26:1625,75,0	1/1:4,13:17:33.11:685,33,0	1/1:2,13:15:33.11:727,33,0	1/1:0,13:13:36.12:794,36,0	1/1:1,19:22:48.16:1056,48,0	1/1:3,29:32:84.29:1853,84,0	1/1:3,22:26:72.20:1475,72,0	1/1:3,28:33:69.24:1522,69,0	1/1:4,10:14:21.07:463,21,0
chr10	78277306	.	T	TCACACACACA	445.14	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-0.850;DP=517;FS=39.308;HRun=0;HaplotypeScore=156.4105;InbreedingCoeff=-0.1095;MQ=47.47;MQ0=18;MQRankSum=0.204;QD=2.41;ReadPosRankSum=-3.432;VQSLOD=-0.4373;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:23.56:0,24,841	0/0:10,0:10:14.77:0,15,279	0/0:8,0:6:15.05:0,15,296	0/0:11,0:3:4.88:0,5,189	0/1:16,0:15:8.80:9,0,205	0/0:23,0:23:57.17:0,57,1487	0/0:26,0:25:24.66:0,25,773	0/1:23,0:22:27.89:28,0,292	0/1:21,0:17:99:127,0,120	0/0:18,0:18:4.02:0,4,810	0/0:21,0:21:8.20:0,8,618	0/0:8,2:11:2.85:0,3,25	0/1:18,0:18:59.34:131,0,59	0/1:25,0:25:39.66:40,0,672	0/0:31,0:31:3.35:0,3,953	0/1:21,0:19:75.41:75,0,122	0/1:15,0:13:89.52:90,0,109	0/1:11,0:11:20.94:43,0,21	0/0:12,0:10:23.93:0,24,272	0/0:25,0:25:29.83:0,30,843	0/0:19,0:15:26.40:0,26,481	1/1:15,0:15:3.37:38,3,0	0/0:7,2:11:1.69:0,2,5	0/1:20,0:19:3.78:4,0,87	0/0:19,0:16:9.02:0,9,120	0/0:24,0:24:57.27:0,57,828	0/0:19,0:18:39.49:0,39,757	0/0:9,0:9:18.06:0,18,425
chr10	78278575	.	TACACACACACACACACACACAC	T	1944.65	PASS	AB=0.862;AC=13;AF=0.250;AN=52;BaseQRankSum=5.280;DP=571;FS=8.525;HRun=0;HaplotypeScore=278.1126;InbreedingCoeff=0.4447;MQ=67.70;MQ0=21;MQRankSum=-4.793;QD=16.91;ReadPosRankSum=-1.230;VQSLOD=1.0380;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:63.20:0,63,4957	1/1:4,4:8:9.03:518,9,0	0/0:39,0:23:6.02:0,6,87	./.	./.	0/0:21,0:21:21.07:0,21,1219	0/0:22,0:21:27.04:0,27,1408	0/0:23,0:22:5.98:0,6,52	0/0:15,0:17:21.07:0,21,932	0/0:27,0:25:2.04:0,2,6	1/1:8,5:13:3.90:174,4,0	0/0:13,0:13:24.08:0,24,1133	0/0:12,0:12:18.06:0,18,1401	1/1:9,1:10:6.02:326,6,0	1/1:14,6:19:7.47:481,7,0	0/0:14,0:15:9.03:0,9,433	0/0:22,0:26:27.05:0,27,782	0/0:18,0:17:21.07:0,21,865	0/1:16,0:17:52.45:104,0,52	0/0:9,0:9:0.89:0,1,2	0/0:30,0:30:15.05:0,15,216	0/0:23,0:24:29.67:0,30,1777	0/0:5,0:5:12.04:0,12,578	0/0:29,0:30:30.10:0,30,2177	0/0:13,0:12:3.01:0,3,219	0/1:18,1:17:99:166,0,113	0/1:12,0:17:52.84:172,0,53	1/1:6,2:8:2.68:154,3,0
chr10	78279015	.	GTCTCTCTC	G	1555.63	PASS	AB=0.910;AC=12;AF=0.214;AN=56;BaseQRankSum=-0.958;DP=561;FS=3.776;HRun=0;HaplotypeScore=227.9129;InbreedingCoeff=-0.2881;MQ=50.40;MQ0=6;MQRankSum=-2.009;QD=6.40;ReadPosRankSum=-2.958;VQSLOD=2.2673;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:75.09:0,75,3023	0/1:9,4:13:99:231,0,478	0/1:30,1:20:27.09:27,0,1719	0/0:26,0:17:40.51:0,41,1192	0/0:25,1:26:43.41:0,43,652	0/0:18,0:18:51.18:0,51,1928	0/0:30,0:29:81.28:0,81,2959	0/0:30,0:29:52.67:0,53,607	0/1:15,0:16:24.43:142,0,24	0/1:16,3:18:99:227,0,400	0/0:21,2:23:29.47:0,29,398	0/1:12,0:14:37.12:37,0,78	0/0:15,0:16:4.97:0,5,45	0/0:17,4:21:42.07:0,42,915	0/0:30,0:31:69.65:0,70,1187	0/1:16,0:19:44.20:151,0,44	0/1:25,0:27:41.49:176,0,41	0/1:19,0:17:99:118,0,287	0/0:10,0:10:22.22:0,22,292	0/0:20,0:18:24.12:0,24,358	0/1:25,0:25:6.01:6,0,105	0/0:14,0:14:2.86:0,3,25	0/0:6,0:6:8.69:0,9,86	0/1:14,0:15:18.15:18,0,46	0/1:22,0:22:51.76:269,0,52	0/1:17,2:22:99:301,0,299	0/0:11,0:11:27.30:0,27,448	0/0:4,0:4:11.87:0,12,205
chr10	78279023	.	C	CTGTGTGTGTGTGTGTG	7735.76	PASS	AB=0.868;AC=43;AF=0.768;AN=56;BaseQRankSum=6.504;DP=613;FS=11.075;HRun=0;HaplotypeScore=277.7967;InbreedingCoeff=0.4643;MQ=45.26;MQ0=8;MQRankSum=-8.038;QD=16.46;ReadPosRankSum=0.203;VQSLOD=1.8706;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:60.53:0,61,1929	1/1:13,0:13:7.53:243,8,0	0/0:34,0:19:8.98:0,9,229	0/0:29,0:17:20.18:0,20,467	1/1:25,0:25:1.29:239,1,0	0/1:17,0:17:99:141,0,964	0/0:27,0:30:51.17:0,51,1764	1/1:32,0:31:27.45:436,27,0	1/1:14,0:14:4.75:403,5,0	1/1:18,0:17:33.77:418,34,0	1/1:22,0:22:9.90:70,10,0	1/1:20,0:20:3.01:213,3,0	1/1:16,0:16:0.89:2,1,0	1/1:21,0:21:33.07:258,33,0	1/1:30,0:30:33.25:309,33,0	1/1:22,0:21:3.01:200,3,0	1/1:28,0:28:15.05:481,15,0	1/1:19,0:17:23.91:242,24,0	1/1:13,0:13:28.23:1087,28,0	1/1:29,0:27:11.97:659,12,0	1/1:26,0:26:1.12:3,1,0	0/0:13,0:12:0.89:0,1,2	0/1:8,9:23:13.19:209,0,13	0/1:14,0:14:16.83:233,0,17	1/1:23,0:22:13.78:353,14,0	1/1:19,0:19:33.31:561,33,0	1/1:16,0:16:13.29:756,13,0	1/1:10,0:10:5.95:218,6,0
chr10	78279037	.	G	GTGTGTC	9702.28	PASS	AB=0.750;AC=35;AF=0.625;AN=56;BaseQRankSum=1.372;DP=669;FS=20.181;HRun=0;HaplotypeScore=180.0908;InbreedingCoeff=0.2260;MQ=46.45;MQ0=11;MQRankSum=-5.910;QD=18.62;ReadPosRankSum=3.676;VQSLOD=3.2279;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:78.07:0,78,1328	1/1:4,11:16:27.09:790,27,0	0/0:29,0:11:22.74:0,23,300	0/0:27,0:14:31.91:0,32,496	1/1:6,19:28:23.30:771,23,0	0/0:17,0:17:42.08:0,42,732	0/0:26,0:25:66.15:0,66,1189	0/1:27,0:27:41.31:478,0,41	1/1:8,0:22:5.99:160,6,0	1/1:4,16:19:42.24:1121,42,0	1/1:5,18:25:11.65:416,12,0	1/1:10,0:20:3.01:81,3,0	0/1:6,0:21:10.07:10,0,30	1/1:6,19:26:35.71:1155,36,0	1/1:4,29:34:10.44:1426,10,0	1/1:9,0:24:3.01:81,3,0	1/1:28,0:28:6.43:143,6,0	1/1:6,12:20:23.20:813,23,0	0/1:8,1:23:4.66:544,0,5	0/1:9,1:33:3.79:327,0,4	0/1:19,0:20:18.22:28,0,18	0/0:7,0:14:0.47:0,0,1	0/1:24,0:25:42.93:116,0,43	1/1:16,0:16:3.95:28,4,0	1/1:26,0:25:29.20:384,29,0	0/1:24,0:24:42.05:456,0,42	0/1:4,0:22:22.42:304,0,22	0/1:3,0:15:28.05:73,0,28
chr10	78279540	.	GT	G	10731.17	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=10.340;DP=539;FS=4.579;HRun=8;HaplotypeScore=116.8722;InbreedingCoeff=0.9789;MQ=80.20;MQ0=0;MQRankSum=-1.970;QD=24.84;ReadPosRankSum=2.556;VQSLOD=4.3363;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:54.17:0,54,652	1/1:1,8:9:24.04:232,24,0	0/0:22,1:23:26.30:0,26,487	0/0:16,0:15:22.85:0,23,222	1/1:1,27:28:81.11:775,81,0	0/0:38,0:38:99:0,108,1293	0/0:10,0:10:30.09:0,30,362	1/1:2,20:22:57.02:527,57,0	1/1:1,19:20:45.07:435,45,0	1/1:0,17:17:51.08:492,51,0	1/1:1,23:24:69.11:666,69,0	1/1:4,18:22:45.06:435,45,0	1/1:1,18:19:51.08:492,51,0	1/1:0,22:22:66.11:637,66,0	1/1:2,22:24:60.09:578,60,0	1/1:1,9:10:21.03:203,21,0	1/1:4,23:27:66.10:637,66,0	1/1:2,12:14:13.45:321,13,0	1/1:1,15:16:45.06:431,45,0	1/1:0,16:16:48.08:464,48,0	1/1:1,15:16:39.06:377,39,0	1/1:2,14:16:39.06:377,39,0	1/1:2,15:17:38.89:376,39,0	1/1:0,15:15:45.07:435,45,0	1/1:0,16:16:36.06:348,36,0	1/1:4,33:37:99:973,102,0	1/1:4,17:21:45.06:434,45,0	1/1:0,4:4:9.01:87,9,0
chr10	78279700	.	TA	T	7568.19	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=7.832;DP=541;FS=0.904;HRun=10;HaplotypeScore=66.8960;InbreedingCoeff=0.9933;MQ=82.15;MQ0=0;MQRankSum=-4.260;QD=17.24;ReadPosRankSum=3.480;VQSLOD=5.5442;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:82.45:0,82,890	1/1:1,11:12:32.99:287,33,0	0/0:21,0:20:44.71:0,45,456	0/0:12,0:12:18.86:0,19,188	1/1:7,27:34:47.79:644,48,0	0/0:20,1:21:31.10:0,31,562	0/0:19,0:19:54.15:0,54,597	1/1:2,15:17:44.99:391,45,0	1/1:2,17:19:50.99:443,51,0	1/1:7,19:26:59.98:521,60,0	1/1:2,18:20:50.98:443,51,0	1/1:2,0:24:32.59:96,33,0	1/1:1,0:19:26.48:78,26,0	1/1:1,12:13:32.99:287,33,0	1/1:2,9:11:26.99:234,27,0	1/1:3,13:16:38.99:339,39,0	1/1:6,21:27:33.99:515,34,0	1/1:1,8:9:20.99:182,21,0	1/1:7,18:25:53.98:469,54,0	1/1:5,17:22:50.99:443,51,0	1/1:0,10:10:26.99:234,27,0	1/1:1,0:18:30.55:90,31,0	1/1:4,0:23:34.63:102,35,0	1/1:1,0:22:38.70:114,39,0	1/1:1,16:17:44.99:391,45,0	1/1:4,27:31:80.98:703,81,0	1/1:1,16:17:17.81:384,18,0	1/1:0,7:7:21:182,21,0
chr10	78280056	.	G	GGGCA	11203.88	PASS	AB=0.686;AC=31;AF=0.554;AN=56;BaseQRankSum=-13.186;DP=605;FS=4.386;HRun=0;HaplotypeScore=101.6164;InbreedingCoeff=0.8855;MQ=76.92;MQ0=1;MQRankSum=-1.006;QD=34.05;ReadPosRankSum=2.633;VQSLOD=5.0027;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:35:48.16:0,48,762	0/0:10,0:10:24.08:0,24,392	0/0:28,0:26:24.08:0,24,378	0/0:24,0:24:39.13:0,39,605	0/0:21,0:21:24.07:0,24,368	0/0:23,0:23:45.15:0,45,735	0/0:36,0:36:78.27:0,78,1269	1/1:11,2:16:15.04:287,15,0	1/1:3,17:21:42.14:1021,42,0	0/0:36,0:36:57.19:0,57,929	0/0:14,0:14:15.05:0,15,244	1/1:8,17:25:54.19:1313,54,0	1/1:11,18:32:48.16:1168,48,0	0/0:13,0:13:27.09:0,27,440	0/0:20,0:20:39.12:0,39,614	1/1:3,15:18:48.16:1150,48,0	1/1:7,19:26:45.15:1095,45,0	0/0:16,0:16:39.13:0,39,637	1/1:10,3:13:12.03:217,12,0	1/1:11,6:16:15.05:365,15,0	0/1:13,11:24:21.88:557,0,22	1/1:12,4:17:12.04:291,12,0	1/1:16,5:21:15.05:365,15,0	1/1:8,20:29:54.18:1314,54,0	1/1:14,7:22:21.07:511,21,0	1/1:17,7:24:27.07:604,27,0	1/1:7,9:18:36.12:873,36,0	1/1:1,3:4:3.01:73,3,0
chr10	78280419	.	T	TA	1157.47	PASS	AB=0.816;AC=12;AF=0.214;AN=56;BaseQRankSum=4.674;DP=469;FS=0.980;HRun=0;HaplotypeScore=87.0892;InbreedingCoeff=0.6186;MQ=64.21;MQ0=0;MQRankSum=-1.196;QD=11.24;ReadPosRankSum=-1.225;VQSLOD=3.5601;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.18:0,72,951	1/1:1,8:9:12.89:181,13,0	0/0:3,0:3:9.02:0,9,102	0/0:10,0:9:27.02:0,27,322	1/1:5,15:20:34.35:328,34,0	0/0:21,0:21:63.15:0,63,825	0/0:18,0:18:54.15:0,54,707	0/0:41,0:41:60.68:0,61,413	0/0:23,0:23:40.82:0,41,289	0/1:9,10:19:4.57:274,0,5	0/1:5,9:14:5.52:197,0,6	0/0:15,0:15:39.80:0,40,196	0/0:14,0:14:39.62:0,40,217	1/1:3,5:8:8.30:129,8,0	1/1:3,6:9:21.84:178,22,0	0/0:17,0:17:23.71:0,24,199	0/0:21,0:21:38.25:0,38,267	0/0:22,0:22:57.09:0,57,289	0/1:16,0:16:31.72:32,0,98	0/0:22,0:22:33.53:0,34,257	0/0:8,0:8:22.96:0,23,121	0/0:12,0:12:34.19:0,34,180	0/0:15,0:15:16.20:0,16,160	0/1:8,0:8:5.37:5,0,65	0/0:21,0:21:57.12:0,57,300	0/0:19,0:19:51.91:0,52,226	0/0:26,0:26:47.13:0,47,319	0/0:14,0:14:17.32:0,17,178
chr10	78280420	.	T	TA	1377.77	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=6.253;DP=462;FS=2.074;HRun=0;HaplotypeScore=85.1870;InbreedingCoeff=0.7078;MQ=64.27;MQ0=0;MQRankSum=-0.980;QD=13.12;ReadPosRankSum=-1.413;VQSLOD=4.3744;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.20:0,69,902	1/1:1,8:9:26.98:236,27,0	0/0:3,0:3:9.01:0,9,94	0/0:10,0:9:27.03:0,27,306	1/1:4,15:19:48.13:437,48,0	0/0:20,0:20:60.15:0,60,783	0/0:18,0:18:54.14:0,54,693	0/0:42,0:42:20.53:0,21,157	0/0:22,0:22:1.70:0,2,105	1/1:9,10:19:2.80:282,3,0	1/1:5,9:14:7.09:224,7,0	0/1:14,0:14:0.28:0,0,51	0/0:14,0:14:9.51:0,10,101	1/1:3,5:8:15.91:170,16,0	1/1:3,6:9:11:174,11,0	0/0:16,0:16:11.49:0,11,85	0/0:20,0:20:20.38:0,20,116	0/0:21,0:21:24.73:0,25,127	0/1:13,0:13:25.49:25,0,31	0/0:22,0:22:43.87:0,44,153	0/0:8,0:8:18.79:0,19,67	0/0:12,0:12:27.68:0,28,101	0/0:16,0:16:8.07:0,8,71	0/0:8,0:8:18.64:0,19,64	0/0:22,0:22:48.31:0,48,174	0/0:19,0:19:34.40:0,34,100	0/0:26,0:26:12.50:0,12,139	0/0:14,0:14:34.16:0,34,133
chr10	78281189	.	GTTTTTT	G	14880.83	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=5.262;DP=651;FS=5.438;HRun=16;HaplotypeScore=153.1927;InbreedingCoeff=0.8585;MQ=59.91;MQ0=1;MQRankSum=-9.920;QD=27.46;ReadPosRankSum=7.471;VQSLOD=1.7381;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:76.81:0,77,1867	1/1:2,6:8:14.98:270,15,0	0/0:25,0:20:2.21:0,2,601	0/0:8,0:7:10.39:0,10,204	1/1:6,16:23:35.05:461,35,0	0/0:12,0:23:42.14:0,42,829	0/0:7,0:17:30.10:0,30,625	1/1:11,22:33:56.77:1026,57,0	1/1:5,16:21:41.83:698,42,0	1/1:8,16:26:47.68:745,48,0	1/1:3,11:15:23.63:332,24,0	1/1:3,29:32:66.41:1150,66,0	1/1:5,24:29:59.54:1040,60,0	1/1:6,22:28:41.99:682,42,0	1/1:3,34:38:72.14:1259,72,0	1/1:2,18:20:45.07:810,45,0	1/1:10,17:28:26.62:443,27,0	1/1:2,5:7:14.97:270,15,0	1/1:10,18:28:46.61:747,47,0	1/1:6,13:19:3.06:386,3,0	1/1:6,9:15:4.85:117,5,0	1/1:7,17:24:32.57:535,33,0	1/1:8,16:25:33.56:539,34,0	1/1:7,19:26:19.89:453,20,0	1/1:4,17:21:32.77:536,33,0	1/1:7,20:27:53.81:921,54,0	1/1:7,33:41:77.90:1329,78,0	1/1:4,2:7:11.34:133,11,0
chr10	78281867	.	TCTCTGTCC	T	3045.75	PASS	AB=0.568;AC=18;AF=0.321;AN=56;BaseQRankSum=6.583;DP=636;FS=6.132;HRun=0;HaplotypeScore=222.4292;InbreedingCoeff=0.8402;MQ=56.66;MQ0=9;MQRankSum=-8.142;QD=15.78;ReadPosRankSum=-0.464;VQSLOD=1.8198;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:89.70:0,90,2839	1/1:1,14:14:21.07:454,21,0	0/0:40,0:22:33.55:0,34,1141	0/0:51,0:30:7.01:0,7,972	1/1:2,21:22:2.94:18,3,0	0/0:21,0:21:54.19:0,54,1956	0/0:22,0:22:54.18:0,54,1689	0/0:32,0:31:81.26:0,81,2211	1/1:4,12:16:6.02:130,6,0	1/1:3,17:20:51.16:1184,51,0	0/1:7,14:21:0:0,0,0	0/0:21,0:20:51.17:0,51,1783	0/0:18,0:18:46.40:0,46,1688	1/1:1,16:17:6.02:148,6,0	0/1:3,19:22:0:0,0,0	1/1:6,14:20:36.11:775,36,0	1/1:10,5:15:26.55:463,27,0	0/0:20,0:21:26.23:0,26,1280	0/0:17,0:14:27.09:0,27,658	0/0:27,0:26:62.99:0,63,1922	0/0:20,0:19:42.14:0,42,1325	0/0:22,0:22:57.18:0,57,2022	0/0:18,0:18:42.11:0,42,1369	0/0:23,0:23:54.13:0,54,1824	1/1:4,20:24:3.48:56,3,0	0/0:18,0:18:51.16:0,51,1561	0/0:17,0:17:36.12:0,36,1228	0/0:18,0:18:24.94:0,25,1359
chr10	78281873	.	TCC	T	963.48	PASS	AB=0.975;AC=16;AF=0.286;AN=56;BaseQRankSum=8.980;DP=624;FS=5.452;HRun=3;HaplotypeScore=174.9362;InbreedingCoeff=0.7317;MQ=53.89;MQ0=9;MQRankSum=-8.283;QD=5.24;ReadPosRankSum=1.377;VQSLOD=0.0880;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:90.11:0,90,1558	1/1:14,0:13:9.24:128,9,0	0/0:41,0:19:39.61:0,40,772	0/0:55,0:27:20.22:0,20,695	0/1:23,0:22:0:0,0,0	0/0:20,0:20:54.19:0,54,1043	0/0:20,0:20:54.18:0,54,990	0/0:33,0:32:93.30:0,93,1702	0/1:16,2:18:20.58:50,0,21	1/1:19,0:18:6.78:372,7,0	0/1:16,0:16:0:0,0,0	0/0:20,0:19:51.17:0,51,945	0/0:18,0:18:49.95:0,50,896	1/1:16,0:16:5.99:64,6,0	0/1:21,0:21:0:0,0,0	1/1:20,0:20:8.29:276,8,0	1/1:12,1:13:11.92:196,12,0	0/0:20,0:20:30.98:0,31,679	0/0:16,0:13:30.10:0,30,545	0/0:30,0:29:62.95:0,63,1119	0/0:20,0:19:42.14:0,42,798	0/0:21,0:21:57.18:0,57,1060	0/0:16,0:16:42.11:0,42,713	0/0:22,1:23:57.04:0,57,1017	1/1:24,0:24:4.26:40,4,0	0/0:18,0:18:54.13:0,54,943	0/0:15,0:15:39.13:0,39,716	0/0:17,0:17:26.09:0,26,739
chr10	78281892	.	G	GTC	4179.35	PASS	AB=0.946;AC=31;AF=0.554;AN=56;BaseQRankSum=8.205;DP=686;FS=1.473;HRun=0;HaplotypeScore=189.6004;InbreedingCoeff=0.7679;MQ=47.77;MQ0=29;MQRankSum=-6.188;QD=10.88;ReadPosRankSum=-1.823;VQSLOD=3.2586;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:68.47:0,68,867	1/1:16,0:15:17.19:121,17,0	0/0:41,0:12:18.06:0,18,231	0/0:58,0:20:2.53:0,3,124	0/1:27,0:26:0:0,0,0	0/0:29,0:29:31.35:0,31,555	0/0:22,0:22:45.13:0,45,569	1/1:30,0:30:36.31:363,36,0	1/1:14,5:19:17.38:224,17,0	1/1:20,3:22:28.89:415,29,0	0/1:17,1:17:0:0,0,0	0/0:22,0:21:38.76:0,39,266	0/0:19,0:19:21.81:0,22,205	0/1:22,0:22:16.05:20,0,16	0/1:20,1:21:0:0,0,0	1/1:15,10:25:8.84:299,9,0	1/1:9,8:18:31.90:394,32,0	1/1:8,14:22:3.73:414,4,0	1/1:13,0:11:21.89:235,22,0	1/1:27,0:26:35.45:470,35,0	1/1:15,0:14:21.93:278,22,0	0/0:26,0:26:32.68:0,33,230	0/0:21,0:19:32.34:0,32,223	0/0:24,0:24:47.53:0,48,338	0/1:23,6:28:0:0,0,0	1/1:27,0:26:37.39:560,37,0	1/1:15,0:15:16.30:261,16,0	1/1:15,0:17:14.55:126,15,0
chr10	78281900	.	CTGTCTCTG	C	4075.80	PASS	AB=0.964;AC=32;AF=0.571;AN=56;BaseQRankSum=5.486;DP=669;FS=21.653;HRun=0;HaplotypeScore=227.5264;InbreedingCoeff=-0.0568;MQ=46.19;MQ0=28;MQRankSum=-2.006;QD=7.88;ReadPosRankSum=-3.819;VQSLOD=0.4856;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:62.48:0,62,1804	1/1:15,0:14:16.59:122,17,0	0/0:33,0:7:17.73:0,18,255	0/1:46,0:12:7.49:7,0,121	1/1:22,0:21:2.16:20,2,0	0/0:26,0:26:8.34:0,8,993	0/0:23,0:23:27.15:0,27,897	1/1:4,21:25:59.23:537,59,0	0/1:17,0:19:10.05:10,0,281	0/1:22,0:23:67.21:308,0,67	1/1:19,0:18:12.77:92,13,0	0/1:22,0:21:50.05:50,0,445	0/1:19,0:19:46.03:46,0,198	0/1:22,0:23:86.96:101,0,87	1/1:21,0:21:5.36:31,5,0	0/1:25,0:25:86.64:87,0,278	0/1:17,0:17:44.50:44,0,256	0/1:20,0:20:43.71:176,0,44	1/1:12,0:11:3.36:243,3,0	1/1:24,0:26:38.11:523,38,0	1/1:16,0:16:27.33:352,27,0	0/1:26,0:26:71.90:72,0,126	0/1:25,0:23:0.51:1,0,426	0/0:25,0:25:2.67:0,3,575	0/1:31,0:30:22.43:22,0,80	0/1:29,0:31:56.82:639,0,57	1/1:14,0:16:41.44:382,41,0	0/1:10,0:13:8.09:211,0,8
chr10	78281906	.	CTG	C	2579.14	PASS	AB=0.989;AC=31;AF=0.554;AN=56;BaseQRankSum=7.144;DP=680;FS=32.167;HRun=0;HaplotypeScore=183.0994;InbreedingCoeff=0.2805;MQ=45.78;MQ0=27;MQRankSum=-3.184;QD=5.62;ReadPosRankSum=-2.922;VQSLOD=0.9676;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:48:7.34:0,7,718	1/1:14,0:13:14.67:87,15,0	0/0:27,0:7:17.86:0,18,135	0/1:38,0:8:8.88:9,0,45	1/1:22,0:21:2.75:21,3,0	0/1:26,0:26:53.09:53,0,272	0/0:22,0:22:29.58:0,30,444	1/1:25,0:25:34.72:238,35,0	0/1:19,0:19:4.91:5,0,117	1/1:26,0:26:16.67:305,17,0	1/1:20,0:19:14.57:97,15,0	0/0:22,0:21:7.73:0,8,366	0/0:18,0:18:3.80:0,4,229	0/1:30,0:30:18.23:126,0,18	1/1:24,0:24:8.82:55,9,0	0/1:23,0:23:36.44:36,0,232	0/1:18,0:18:7.42:7,0,181	0/1:20,0:20:28.86:29,0,104	0/1:15,1:15:8.93:136,0,9	1/1:26,2:28:35.83:269,36,0	1/1:19,0:18:33.76:259,34,0	0/1:25,1:26:14.74:15,0,210	0/0:25,0:23:43.17:0,43,433	0/0:28,0:28:24.71:0,25,574	0/0:30,0:29:0.84:0,1,80	1/1:32,1:32:42.11:557,42,0	1/1:20,1:21:38.87:273,39,0	1/1:11,0:11:20.86:189,21,0
chr10	78281908	.	GTC	G	505.23	PASS	AB=0.968;AC=17;AF=0.327;AN=52;BaseQRankSum=0.934;DP=670;FS=4.250;HRun=0;HaplotypeScore=183.5451;InbreedingCoeff=-0.1483;MQ=46.02;MQ0=29;MQRankSum=0.803;QD=1.35;ReadPosRankSum=-0.379;VQSLOD=2.4919;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:49,1:50:24.08:24,0,413	0/0:14,0:13:1.04:0,1,3	./.	./.	1/1:23,0:22:2.37:10,2,0	0/1:24,2:26:99:103,0,173	0/0:24,0:23:22.60:0,23,280	0/0:25,0:25:6.48:0,6,37	0/0:16,0:16:17.64:0,18,182	0/1:25,0:25:11.44:86,0,11	0/1:20,0:18:8.21:71,0,8	0/1:20,0:19:22.48:22,0,237	0/1:18,1:19:13.46:13,0,149	0/1:29,1:30:28.39:187,0,28	0/1:22,1:23:8.17:37,0,8	0/0:24,0:24:16.95:0,17,289	0/0:18,0:18:23.37:0,23,282	0/1:17,0:20:5.67:7,0,6	0/0:17,0:16:3.31:0,3,30	0/0:26,0:26:10.61:0,11,94	0/0:18,0:17:2.68:0,3,23	0/1:23,1:27:21.13:21,0,111	0/0:25,0:23:27.07:0,27,350	0/0:30,0:30:26.04:0,26,420	0/1:29,0:28:22.59:23,0,84	0/1:33,0:32:2.66:3,0,30	0/1:19,0:19:1.99:2,0,81	1/1:9,0:9:6.39:39,6,0
chr10	78283180	.	GA	G	3669.26	PASS	AB=0.933;AC=11;AF=0.196;AN=56;BaseQRankSum=13.452;DP=657;FS=5.275;HRun=6;HaplotypeScore=75.9779;InbreedingCoeff=0.8037;MQ=75.47;MQ0=0;MQRankSum=0.480;QD=24.30;ReadPosRankSum=4.268;VQSLOD=3.7154;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,1431	0/0:13,0:13:39.12:0,39,499	0/1:13,0:14:31.83:32,0,157	0/0:16,0:15:0.03:0,0,126	0/0:34,0:34:99:0,99,1233	0/0:22,0:22:66.20:0,66,847	0/0:14,0:14:39.12:0,39,496	0/0:32,0:32:75.23:0,75,955	0/0:23,0:23:66.21:0,66,856	0/0:22,0:22:63.66:0,64,801	0/0:22,0:22:63.20:0,63,820	1/1:1,25:26:72.18:773,72,0	1/1:0,26:26:68.85:739,69,0	0/0:30,0:30:87.27:0,87,1122	0/0:25,0:25:75.22:0,75,951	0/0:19,0:19:54.15:0,54,668	0/0:31,0:31:90.74:0,91,1147	0/0:29,0:29:78.24:0,78,1004	0/0:16,0:16:39.10:0,39,473	0/0:16,0:16:42.11:0,42,520	0/0:21,0:21:57.19:0,57,744	1/1:5,19:24:51.13:547,51,0	1/1:2,21:23:54.14:579,54,0	1/1:1,37:38:93.23:999,93,0	0/0:28,0:28:72.20:0,72,901	0/0:28,0:28:84.27:0,84,1097	0/0:21,0:21:57.17:0,57,721	0/0:1,0:1:3.01:0,3,39
chr10	78285488	.	AAC	A	13013.52	PASS	AB=0.780;AC=46;AF=0.821;AN=56;BaseQRankSum=7.855;DP=662;FS=7.237;HRun=0;HaplotypeScore=90.6530;InbreedingCoeff=0.7464;MQ=62.43;MQ0=3;MQRankSum=1.274;QD=23.62;ReadPosRankSum=2.722;VQSLOD=5.5633;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:44,4:47:33.37:33,0,1429	1/1:3,13:17:41.49:478,41,0	0/0:32,0:17:24.07:0,24,341	0/0:32,0:15:32.30:0,32,430	1/1:2,41:44:99:1211,105,0	0/0:27,1:28:27.03:0,27,927	0/0:19,0:19:45.15:0,45,696	1/1:10,22:32:65.90:761,66,0	1/1:5,21:27:57.01:665,57,0	1/1:3,22:25:63.19:758,63,0	1/1:2,14:16:39.04:438,39,0	1/1:1,18:19:45.14:543,45,0	1/1:5,18:23:17.20:545,17,0	1/1:1,11:13:32.93:376,33,0	1/1:3,15:18:36.11:434,36,0	1/1:3,16:19:48.15:579,48,0	1/1:8,29:38:77.36:917,77,0	0/1:9,12:21:12.32:457,0,12	1/1:2,4:6:12.04:145,12,0	1/1:4,15:19:42.13:507,42,0	1/1:5,21:26:57.17:688,57,0	1/1:2,8:10:24.07:290,24,0	1/1:3,18:21:36.10:434,36,0	1/1:1,15:18:29.92:340,30,0	1/1:4,21:25:57.17:688,57,0	1/1:7,23:30:69.11:788,69,0	1/1:2,24:26:66.20:795,66,0	1/1:4,6:10:11.79:145,12,0
chr10	78286416	.	A	ACC	283.74	PASS	AB=0.903;AC=6;AF=0.111;AN=54;BaseQRankSum=-0.097;DP=459;FS=11.479;HRun=0;HaplotypeScore=108.5003;InbreedingCoeff=-0.1131;MQ=47.99;MQ0=11;MQRankSum=-2.325;QD=2.93;ReadPosRankSum=-2.724;VQSLOD=0.8907;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:34.92:0,35,433	0/0:6,0:6:14.53:0,15,179	0/0:21,0:5:7.17:0,7,61	0/1:15,0:6:3.76:4,0,51	0/0:35,0:35:89.21:0,89,1081	0/0:15,0:15:41.97:0,42,576	0/0:11,0:10:27.09:0,27,360	0/0:27,0:27:72.21:0,72,969	0/0:14,0:14:42.11:0,42,529	0/0:20,0:19:48.16:0,48,653	0/0:15,0:15:36.03:0,36,427	0/1:13,1:14:86.37:86,0,205	0/1:8,9:19:99:178,0,204	0/0:17,0:17:46.94:0,47,566	0/0:19,0:19:50.48:0,50,602	0/0:16,0:16:42.11:0,42,517	0/0:22,0:21:44.46:0,44,531	./.	0/0:16,0:16:45.14:0,45,621	0/0:23,0:20:50.12:0,50,601	0/0:5,0:5:15.05:0,15,200	0/1:13,1:14:47.80:48,0,140	0/1:24,2:25:77.93:78,0,304	0/1:8,0:8:0.43:0,0,36	0/0:19,0:19:51.03:0,51,601	0/0:21,0:21:55.25:0,55,599	0/0:15,0:15:37.50:0,38,450	0/0:8,0:7:15.05:0,15,216
chr10	78287062	.	A	AG	1007.91	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.845;DP=597;FS=6.549;HRun=0;HaplotypeScore=62.2706;InbreedingCoeff=0.9918;MQ=86.05;MQ0=0;MQRankSum=-2.549;QD=37.33;ReadPosRankSum=1.104;VQSLOD=3.6692;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.20:0,60,839	0/0:7,0:7:21.07:0,21,294	0/0:17,0:17:42.71:0,43,598	0/0:24,0:24:52.42:0,52,751	0/0:20,0:20:57.19:0,57,797	0/0:19,0:19:54.17:0,54,737	0/0:14,0:14:42.14:0,42,586	0/0:36,0:36:99:0,108,1482	0/0:30,0:30:90.28:0,90,1225	0/0:23,0:23:66.22:0,66,922	0/0:19,0:19:57.16:0,57,776	0/0:21,0:21:63.18:0,63,840	0/0:24,0:24:72.24:0,72,1001	0/0:22,0:22:66.21:0,66,906	0/0:26,0:26:75.25:0,75,1048	0/0:28,0:28:84.21:0,84,1132	0/0:20,0:20:60.20:0,60,838	1/1:1,26:27:69.24:1103,69,0	0/0:22,0:22:66.20:0,66,892	0/0:27,0:27:81.27:0,81,1132	0/0:26,0:26:78.24:0,78,1062	0/0:13,0:13:39.13:0,39,545	0/0:14,0:14:42.14:0,42,587	0/0:19,0:19:54.17:0,54,738	0/0:25,0:25:72.24:0,72,1007	0/0:16,0:15:42.13:0,42,572	0/0:30,0:30:87.27:0,87,1194	0/0:7,0:7:21.07:0,21,294
chr10	78287289	.	TTGTGTGTGTGTGTGTG	T	1519.45	PASS	AB=0.875;AC=8;AF=0.148;AN=54;BaseQRankSum=1.993;DP=560;FS=0.888;HRun=0;HaplotypeScore=226.8485;InbreedingCoeff=0.5684;MQ=56.22;MQ0=45;MQRankSum=-4.897;QD=14.75;ReadPosRankSum=-0.090;VQSLOD=2.5792;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:30.10:0,30,1638	0/0:7,0:7:6.49:0,6,308	0/0:30,0:23:3.01:0,3,35	./.	0/0:27,0:21:21.07:0,21,1118	0/0:21,0:21:27.09:0,27,1867	0/0:16,0:16:27.06:0,27,1442	0/0:28,0:28:36.12:0,36,1357	0/0:18,0:12:12.02:0,12,301	0/0:24,0:17:24.96:0,25,1252	0/0:21,0:15:18.06:0,18,1034	0/0:15,0:15:21.04:0,21,446	0/0:15,0:14:24.08:0,24,479	0/0:16,0:13:1.59:0,2,133	0/0:21,0:19:13.34:0,13,814	0/0:19,0:16:5.41:0,5,250	0/0:18,0:15:12.04:0,12,537	0/1:16,1:21:3.96:350,0,4	1/1:15,0:16:8.66:145,9,0	1/1:11,13:24:29.98:913,30,0	0/1:15,0:13:2.12:2,0,30	0/0:16,0:15:12.04:0,12,322	0/0:23,0:23:30.09:0,30,538	0/0:9,0:9:15.05:0,15,448	0/0:32,0:28:29.69:0,30,988	0/0:15,0:16:23.44:0,23,977	1/1:15,7:22:6.02:243,6,0	0/0:9,0:8:6.02:0,6,399
chr10	78287454	.	G	GCTGA	774.70	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.455;DP=529;FS=2.760;HRun=0;HaplotypeScore=97.8833;InbreedingCoeff=0.8558;MQ=84.67;MQ0=0;MQRankSum=-2.009;QD=55.34;ReadPosRankSum=1.235;VQSLOD=4.9638;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.21:0,60,1224	0/0:8,0:8:24.08:0,24,498	0/0:25,0:25:67.21:0,67,1318	0/0:21,0:21:60.17:0,60,1146	0/0:21,0:21:45.15:0,45,939	0/0:10,0:10:27.09:0,27,566	0/0:14,0:14:42.14:0,42,881	0/0:18,0:18:48.16:0,48,957	0/0:19,0:19:57.18:0,57,1156	0/0:18,0:18:45.15:0,45,944	0/0:13,0:13:29.69:0,30,627	0/0:20,0:20:57.13:0,57,1051	0/0:17,0:17:51.16:0,51,1028	0/0:17,0:17:48.15:0,48,967	0/0:31,0:31:90.31:0,90,1879	0/0:19,0:19:57.18:0,57,1158	0/0:33,0:33:90.31:0,90,1835	1/1:1,10:14:30.10:869,30,0	0/0:29,0:29:81.22:0,81,1575	0/0:13,0:13:39.13:0,39,818	0/0:33,0:33:75.26:0,75,1570	0/0:4,0:4:5.99:0,6,121	0/0:17,0:17:42.14:0,42,842	0/0:23,0:24:71.83:0,72,1454	0/0:21,0:21:51.18:0,51,1070	0/0:17,0:17:48.16:0,48,998	0/0:26,0:26:78.22:0,78,1502	0/0:3,0:3:9.03:0,9,188
chr10	78287556	.	TTGC	T	23156.45	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=9.147;DP=683;FS=4.691;HRun=0;HaplotypeScore=110.5884;InbreedingCoeff=0.9963;MQ=75.35;MQ0=0;MQRankSum=-8.247;QD=43.86;ReadPosRankSum=4.608;VQSLOD=6.0775;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,2761	1/1:0,9:9:24.08:409,24,0	0/0:29,0:29:78.22:0,78,1702	0/0:21,0:21:60.07:0,60,1266	1/1:0,22:22:60.21:1023,60,0	0/0:25,0:25:72.25:0,72,1636	0/0:20,0:20:60.21:0,60,1365	1/1:3,36:39:99:1842,108,0	1/1:1,18:19:51.17:870,51,0	1/1:0,30:30:87.21:1386,87,0	1/1:2,24:26:66.23:1125,66,0	1/1:0,21:21:57.20:972,57,0	1/1:1,14:15:33.11:563,33,0	1/1:0,24:24:69.24:1175,69,0	1/1:0,21:21:51.17:870,51,0	1/1:1,21:22:60.21:1023,60,0	1/1:1,37:38:96.33:1638,96,0	0/0:17,0:17:45.15:0,45,1037	1/1:1,27:28:78.23:1250,78,0	1/1:2,27:29:72.12:1134,72,0	1/1:0,43:43:99:1689,99,0	1/1:0,22:21:54.18:921,54,0	1/1:0,18:18:45.15:767,45,0	1/1:1,21:22:54.18:921,54,0	1/1:3,12:15:36.12:614,36,0	1/1:1,29:29:84.29:1433,84,0	1/1:1,29:30:75.26:1277,75,0	1/1:0,5:5:15.05:256,15,0
chr10	78288206	.	A	ACAGAGGAAC	53856.06	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-12.699;DP=663;FS=0.792;HRun=0;HaplotypeScore=130.7943;InbreedingCoeff=0.9882;MQ=76.99;MQ0=0;MQRankSum=-14.913;QD=99.92;ReadPosRankSum=3.107;VQSLOD=5.6161;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,3951	1/1:0,7:12:18.06:907,18,0	0/0:27,0:27:80.75:0,81,2156	0/0:16,0:16:41.21:0,41,1174	1/1:0,22:33:60.05:2552,60,0	0/0:17,0:17:51.17:0,51,1542	0/0:20,0:20:60.19:0,60,1626	1/1:0,22:46:99:5301,135,0	1/1:1,13:18:42.14:2101,42,0	1/1:1,18:27:78.24:3383,78,0	1/1:0,13:20:42.06:1899,42,0	1/1:1,16:25:45.15:2266,45,0	1/1:0,15:25:42.14:2116,42,0	1/1:1,20:30:63.17:3173,63,0	1/1:1,27:42:75.02:3778,75,0	1/1:0,18:25:54.19:2722,54,0	1/1:1,12:16:36.04:1642,36,0	1/1:0,14:19:42.14:2046,42,0	1/1:1,3:13:36.10:1172,36,0	1/1:1,21:31:69.08:2938,69,0	1/1:0,7:11:18.06:785,18,0	1/1:2,13:23:45.05:2124,45,0	1/1:1,16:21:48.16:2395,48,0	1/1:0,10:13:21.49:1020,21,0	1/1:1,22:33:63.22:3175,63,0	1/1:1,15:19:54.15:2429,54,0	1/1:1,22:31:65.93:3327,66,0	1/1:0,4:6:12.04:606,12,0
chr10	78290670	.	TG	T	3740.20	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=3.419;DP=791;FS=1.628;HRun=6;HaplotypeScore=103.1249;InbreedingCoeff=0.9998;MQ=93.47;MQ0=0;MQRankSum=-6.001;QD=28.12;ReadPosRankSum=3.600;VQSLOD=3.6715;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,141,1826	0/0:15,0:15:45.15:0,45,592	0/0:33,0:33:81.26:0,81,1054	0/0:35,0:35:88.75:0,89,1132	0/0:25,0:25:69.22:0,69,894	0/0:32,0:32:90.29:0,90,1184	0/0:24,0:24:69.22:0,69,906	0/0:26,0:26:75.24:0,75,975	0/0:49,1:50:99:0,100,1649	0/0:27,0:27:75.21:0,75,968	0/0:19,0:19:51.15:0,51,656	1/1:1,25:26:66.17:709,66,0	1/1:0,33:33:93.23:1000,93,0	0/0:27,0:27:81.25:0,81,1052	0/0:35,0:35:96.30:0,96,1249	0/0:30,0:30:84.26:0,84,1093	0/0:17,0:17:51.15:0,51,655	0/0:12,0:12:33.11:0,33,434	0/0:17,0:17:45.15:0,45,589	0/0:26,0:26:75.24:0,75,986	0/0:43,0:43:99:0,123,1617	1/1:1,17:18:48.12:516,48,0	1/1:2,24:26:60.15:645,60,0	1/1:1,29:30:80.80:870,81,0	0/0:27,0:27:75.24:0,75,985	0/0:42,0:42:99:0,126,1644	0/0:35,0:35:99:0,99,1287	0/0:11,0:11:30.06:0,30,351
chr10	78290989	.	ACTCCTC	A	4081.36	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.008;DP=634;FS=6.608;HRun=0;HaplotypeScore=132.8847;InbreedingCoeff=0.9811;MQ=67.23;MQ0=3;MQRankSum=-12.721;QD=31.64;ReadPosRankSum=1.623;VQSLOD=2.9919;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:81.26:0,81,2552	0/0:13,0:13:27.09:0,27,895	0/0:36,0:23:26.92:0,27,623	0/0:29,0:27:51.13:0,51,1204	0/0:25,0:25:53.83:0,54,1534	0/0:11,0:11:24.07:0,24,674	0/0:26,0:26:65.92:0,66,1841	0/0:30,0:30:38.10:0,38,633	0/0:18,0:18:45.15:0,45,1493	0/0:28,0:28:51.05:0,51,1468	0/0:23,0:24:54.09:0,54,1336	1/1:4,15:19:33.04:654,33,0	1/1:6,19:25:42.04:803,42,0	0/0:15,0:15:36.12:0,36,1067	1/1:7,15:22:42.14:889,42,0	0/0:25,0:25:63.19:0,63,1872	0/0:20,0:20:51.17:0,51,1459	0/0:17,0:17:27.09:0,27,821	0/0:14,0:12:18.05:0,18,525	0/0:25,0:25:57.20:0,57,1792	0/0:25,0:25:54.19:0,54,1661	1/1:2,24:26:51.13:1037,51,0	1/1:5,12:17:23.84:509,24,0	1/1:9,11:20:8.86:189,9,0	0/0:41,0:41:99:0,102,3119	0/0:1,0:22:62.15:0,62,406	0/0:17,0:17:39.12:0,39,1214	0/0:5,0:12:14.78:0,15,93
chr10	78292379	.	ACT	A	5172.01	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.648;DP=745;FS=1.224;HRun=0;HaplotypeScore=88.6483;InbreedingCoeff=0.9990;MQ=90.46;MQ0=0;MQRankSum=-1.772;QD=42.39;ReadPosRankSum=5.056;VQSLOD=6.7661;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,2116	0/0:18,0:18:54.17:0,54,1054	0/0:28,0:28:78.01:0,78,1462	0/0:31,0:31:89.95:0,90,1684	0/0:36,0:36:99:0,108,2084	0/0:31,0:31:93.29:0,93,1813	0/0:30,0:30:90.27:0,90,1753	0/0:33,0:33:99:0,99,1969	0/0:20,0:20:60.21:0,60,1191	0/0:44,0:44:99:0,132,2644	0/0:20,0:20:60.18:0,60,1153	1/1:1,22:23:57.19:917,57,0	1/1:0,20:20:60.20:978,60,0	0/0:33,0:33:99:0,99,1966	0/0:25,0:25:75.24:0,75,1461	0/0:31,0:31:93.29:0,93,1814	0/0:30,0:30:90.29:0,90,1778	0/0:15,0:15:45.11:0,45,854	0/0:14,0:14:42.14:0,42,853	0/0:34,0:34:99:0,102,2056	0/0:32,0:32:96.29:0,96,1869	1/1:0,30:30:81.28:1320,81,0	1/1:0,24:24:60.07:978,60,0	1/1:0,25:25:60.20:978,60,0	0/0:30,0:30:90.29:0,90,1788	0/0:28,0:28:84.27:0,84,1609	0/0:17,0:17:51.14:0,51,962	0/0:7,0:7:21.07:0,21,426
chr10	78292913	.	C	CCCCCAT	365.73	PASS	AC=28;AF=0.700;AN=40;BaseQRankSum=1.073;DP=112;FS=3.017;HRun=0;HaplotypeScore=50.3992;InbreedingCoeff=0.4927;MQ=76.71;MQ0=0;MQRankSum=-2.497;QD=7.03;ReadPosRankSum=0.165;VQSLOD=1.2375;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:24.04:0,24,389	1/1:1,0:1:3:25,3,0	0/0:12,0:10:14.57:0,15,177	0/0:7,0:5:5.50:0,6,41	./.	0/0:5,0:5:8.99:0,9,110	0/0:5,0:5:9.01:0,9,136	0/0:4,0:4:0.89:0,1,2	./.	1/1:4,0:4:3.34:16,3,0	./.	1/1:7,0:7:5.97:113,6,0	1/1:2,0:2:6.01:72,6,0	1/1:5,0:5:0.81:2,1,0	./.	1/1:3,0:3:2.42:19,2,0	1/1:4,0:4:0.89:2,1,0	1/1:4,0:4:5.75:55,6,0	1/1:2,0:2:2.37:8,2,0	./.	1/1:4,0:4:2.99:24,3,0	./.	1/1:3,2:6:3.01:35,3,0	1/1:6,0:6:8.97:91,9,0	1/1:2,0:2:2.92:17,3,0	./.	1/1:2,0:2:2.92:17,3,0	./.
chr10	78292959	.	CAAGCAAGCCAACA	C	5938.54	PASS	AC=32;AF=0.593;AN=54;BaseQRankSum=9.597;DP=233;FS=47.202;HRun=0;HaplotypeScore=100.5206;InbreedingCoeff=0.8466;MQ=113.20;MQ0=0;MQRankSum=-9.696;QD=68.26;ReadPosRankSum=-0.420;VQSLOD=2.7203;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.07:0,51,3000	1/1:1,1:2:3.01:56,3,0	0/0:24,0:24:36.12:0,36,1598	0/0:20,0:20:45.15:0,45,2037	1/1:0,4:4:12.04:253,12,0	0/0:9,0:9:27.09:0,27,1631	0/0:14,0:14:39.13:0,39,2372	1/1:5,2:7:6.02:228,6,0	1/1:1,4:5:12.04:455,12,0	1/1:4,9:13:24.08:847,24,0	1/1:0,5:5:15.05:451,15,0	0/0:15,0:15:45.15:0,45,2825	0/0:12,0:12:36.12:0,36,2212	1/1:0,4:4:12:316,12,0	1/1:0,6:6:18.06:603,18,0	1/1:0,6:6:18.06:504,18,0	1/1:2,2:4:1.25:111,1,0	0/0:8,0:8:21.07:0,21,1270	1/1:3,2:5:6.02:161,6,0	1/1:1,5:6:15.05:510,15,0	1/1:3,3:6:3.01:114,3,0	0/0:6,0:6:9.03:0,9,576	0/0:9,0:9:24.08:0,24,1533	0/0:11,0:11:31.35:0,31,1921	1/1:0,4:4:12.04:455,12,0	1/1:0,5:5:15.04:481,15,0	1/1:1,4:5:12.04:395,12,0	./.
chr10	78293075	.	A	AT	7000.99	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=10.218;DP=491;FS=34.979;HRun=9;HaplotypeScore=64.9952;InbreedingCoeff=0.9694;MQ=76.15;MQ0=0;MQRankSum=-1.081;QD=26.32;ReadPosRankSum=-0.336;VQSLOD=2.9404;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:98.96:0,99,859	1/1:1,3:4:9.02:100,9,0	0/0:14,0:14:29.68:0,30,256	0/0:13,0:13:20.84:0,21,182	1/1:0,22:22:66.18:730,66,0	0/0:20,0:20:59.99:0,60,521	0/0:26,0:26:68.96:0,69,595	1/1:7,17:25:30.92:544,31,0	1/1:1,14:15:42.11:465,42,0	1/1:3,11:14:33.09:365,33,0	1/1:2,11:13:30.08:332,30,0	0/0:27,0:27:74.97:0,75,651	0/0:15,0:15:26.98:0,27,234	1/1:1,16:17:42.07:451,42,0	1/1:1,14:15:36.10:398,36,0	1/1:0,14:14:42.11:465,42,0	1/1:0,8:8:24.06:265,24,0	0/0:12,0:12:32.97:0,33,281	1/1:2,19:21:54.15:597,54,0	1/1:2,10:12:24.03:253,24,0	1/1:4,25:29:69.19:763,69,0	0/0:18,0:18:53.99:0,54,469	0/0:15,0:15:44.97:0,45,387	0/0:24,2:26:5.63:0,6,507	1/1:6,12:18:33.09:365,33,0	1/1:3,10:13:30.06:321,30,0	1/1:3,18:21:42.10:455,42,0	1/1:1,4:5:12.03:133,12,0
chr10	78295336	.	G	GCAACCCCATAAGAAGAA	42135.94	PASS	AC=44;AF=0.815;AN=54;BaseQRankSum=-0.854;DP=483;FS=47.302;HRun=0;HaplotypeScore=174.9427;InbreedingCoeff=0.9483;MQ=42.52;MQ0=10;MQRankSum=-13.730;QD=130.86;ReadPosRankSum=0.698;VQSLOD=2.6554;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,148,6631	1/1:2,2:5:9.03:595,9,0	0/0:34,0:20:60.21:0,60,2583	0/0:30,0:22:66.20:0,66,2642	1/1:5,3:9:21.96:1311,22,0	0/0:26,0:26:69.24:0,69,3032	0/0:17,0:17:48.16:0,48,2166	1/1:37,0:31:72.20:2983,72,0	1/1:8,5:13:33.11:2250,33,0	1/1:12,11:24:69.22:4186,69,0	1/1:4,3:7:12.04:765,12,0	1/1:9,4:12:30.10:1925,30,0	1/1:10,4:17:33.11:2459,33,0	1/1:12,6:18:48.16:3577,48,0	1/1:11,9:19:36.09:2532,36,0	1/1:9,1:12:24.05:1407,24,0	1/1:8,3:10:21.07:1498,21,0	1/1:5,6:13:21.07:1179,21,0	1/1:8,7:14:39.13:2992,39,0	1/1:5,5:9:18.06:1178,18,0	1/1:10,0:10:15.05:713,15,0	1/1:5,3:6:15.05:790,15,0	1/1:7,3:9:7.36:1185,7,0	1/1:12,3:16:39.13:2348,39,0	1/1:6,5:9:24.08:1457,24,0	1/1:7,6:13:27.09:1940,27,0	1/1:10,8:18:36.12:2869,36,0	./.
chr10	78296685	.	AT	A	4778.07	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.738;DP=625;FS=0.780;HRun=1;HaplotypeScore=61.8859;InbreedingCoeff=0.9953;MQ=80.52;MQ0=0;MQRankSum=-1.405;QD=39.82;ReadPosRankSum=2.232;VQSLOD=5.5145;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.24:0,78,1195	0/0:7,0:7:21.07:0,21,336	0/0:25,0:25:72.05:0,72,1058	0/0:16,0:16:45.13:0,45,690	0/0:32,0:32:96.30:0,96,1488	0/0:36,0:36:99:0,108,1698	0/0:12,0:12:36.12:0,36,573	0/0:25,0:25:75.25:0,75,1177	0/0:21,0:21:63.21:0,63,1007	0/0:30,0:30:90.31:0,90,1438	0/0:24,0:24:72.23:0,72,1123	1/1:0,23:23:60.20:838,60,0	1/1:0,20:20:60.20:836,60,0	0/0:23,0:23:69.24:0,69,1103	0/0:32,0:32:96.31:0,96,1511	0/0:17,0:17:51.17:0,51,815	0/0:20,0:20:60.18:0,60,929	0/0:6,0:6:15.05:0,15,239	0/0:18,0:18:54.15:0,54,809	0/0:36,0:36:99:0,108,1696	0/0:18,0:18:54.18:0,54,863	1/1:0,34:34:99:1427,102,0	1/1:0,27:27:72.13:1007,72,0	1/1:0,16:16:48.16:671,48,0	0/0:19,0:19:57.17:0,57,883	0/0:21,0:21:63.21:0,63,985	0/0:27,0:26:81.26:0,81,1271	0/0:14,0:14:42.14:0,42,671
chr10	78297472	.	A	ACCTTCCTTCCTT	33048.31	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=5.091;DP=662;FS=27.121;HRun=0;HaplotypeScore=287.0136;InbreedingCoeff=0.8742;MQ=62.48;MQ0=1;MQRankSum=-8.792;QD=60.31;ReadPosRankSum=0.835;VQSLOD=3.0652;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:51.14:0,51,1502	1/1:8,0:9:18.06:935,18,0	0/0:23,0:20:15.05:0,15,360	0/0:26,0:23:17.83:0,18,520	1/1:15,0:25:27.02:866,27,0	0/0:20,0:20:48.16:0,48,1598	0/0:14,0:14:30.10:0,30,1011	1/1:48,0:46:58.95:1373,59,0	1/1:23,0:23:50.86:1532,51,0	1/1:19,0:19:42.07:1427,42,0	1/1:12,0:12:20.86:476,21,0	1/1:7,15:24:33.11:1945,33,0	1/1:8,13:21:42.14:2309,42,0	1/1:14,0:32:36.04:1626,36,0	1/1:14,0:32:36.12:1758,36,0	1/1:20,0:20:50.95:1632,51,0	1/1:15,0:15:30:953,30,0	0/1:5,0:5:28.62:153,0,29	1/1:39,0:38:66.09:1680,66,0	1/1:29,0:29:47.03:1520,47,0	1/1:28,0:27:26.90:540,27,0	1/1:5,11:17:30.10:1661,30,0	1/1:3,11:16:27.09:1547,27,0	1/1:10,9:21:15.05:881,15,0	1/1:31,0:31:66.01:1850,66,0	1/1:33,0:33:80.95:2343,81,0	1/1:37,0:37:93.15:3064,93,0	1/1:12,0:11:24.03:978,24,0
chr10	78297497	.	CT	C	1005.29	PASS	AB=0.798;AC=12;AF=0.214;AN=56;BaseQRankSum=12.407;DP=613;FS=0.440;HRun=3;HaplotypeScore=167.3400;InbreedingCoeff=-0.2665;MQ=57.62;MQ0=3;MQRankSum=-7.277;QD=4.22;ReadPosRankSum=3.557;VQSLOD=0.3987;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.20:0,60,919	0/0:7,0:7:21.07:0,21,316	0/0:35,1:15:38.85:0,39,540	0/0:61,0:24:41.65:0,42,524	0/0:18,0:18:29.43:0,29,584	0/0:24,0:24:72.24:0,72,1131	0/0:16,0:16:45.46:0,45,683	0/0:20,0:19:51.14:0,51,761	0/1:11,4:18:92.91:93,0,472	0/1:17,6:23:88.15:88,0,648	0/1:8,2:10:5.90:6,0,331	0/0:18,0:18:50.38:0,50,699	0/0:23,0:23:63.68:0,64,932	0/0:23,0:23:14.30:0,14,551	0/0:24,0:24:57.19:0,57,867	0/1:16,4:21:78.94:79,0,673	0/0:21,1:22:33.50:0,34,763	0/1:4,1:5:14.41:14,0,133	0/1:20,2:21:16.40:16,0,728	0/1:16,4:24:99:118,0,605	0/1:11,10:20:99:176,0,338	0/0:20,0:20:36.46:0,36,711	0/0:19,0:19:42:0,42,597	0/0:21,0:21:43.36:0,43,664	0/1:15,10:25:99:133,0,549	0/1:13,10:23:99:171,0,531	0/1:24,5:36:99:206,0,829	0/1:6,4:9:53.48:53,0,154
chr10	78297500	.	TCTC	T	96.13	PASS	AB=0.841;AC=6;AF=0.107;AN=56;BaseQRankSum=10.923;DP=622;FS=0.000;HRun=0;HaplotypeScore=184.4599;InbreedingCoeff=-0.1263;MQ=58.07;MQ0=3;MQRankSum=-6.935;QD=0.79;ReadPosRankSum=3.327;VQSLOD=2.1797;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.21:0,66,1415	0/0:7,0:7:21.07:0,21,473	0/0:37,0:15:24.91:0,25,613	0/0:66,0:25:46.01:0,46,811	0/0:19,0:19:29.02:0,29,946	0/0:25,0:25:75.26:0,75,1756	0/0:16,0:16:44.47:0,44,1031	0/0:20,0:19:54.18:0,54,1204	0/0:20,0:20:14.11:0,14,864	0/1:18,6:24:41.62:42,0,1107	0/0:8,2:10:9.87:0,10,544	0/0:18,0:18:43.81:0,44,1126	0/0:23,0:23:53.46:0,53,1447	0/0:24,0:24:9.77:0,10,853	0/0:24,0:24:57.19:0,57,1280	0/0:19,0:19:14.03:0,14,1052	0/0:23,0:23:59.93:0,60,1254	0/1:4,0:5:40.49:40,0,204	0/0:19,0:18:51.80:0,52,1154	0/1:21,1:23:54.01:54,0,1004	0/0:15,1:15:20.80:0,21,584	0/0:24,0:24:37.47:0,37,1249	0/0:19,0:19:41.93:0,42,964	0/0:21,0:21:36.95:0,37,1012	0/0:25,0:25:23.34:0,23,1016	0/1:18,6:24:36.05:36,0,927	0/1:36,0:36:22.48:22,0,1386	0/1:5,4:9:25.82:26,0,283
chr10	78297506	.	C	CT	1848.45	PASS	AB=0.931;AC=12;AF=0.214;AN=56;BaseQRankSum=12.457;DP=667;FS=0.462;HRun=0;HaplotypeScore=169.0310;InbreedingCoeff=-0.2705;MQ=61.82;MQ0=4;MQRankSum=-8.396;QD=7.51;ReadPosRankSum=3.248;VQSLOD=3.5531;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:46.50:0,46,780	0/0:8,0:8:24.06:0,24,302	0/0:44,0:19:36.33:0,36,396	0/0:78,0:29:26.91:0,27,421	0/0:23,0:23:35.40:0,35,684	0/0:25,0:25:75.23:0,75,1015	0/0:17,0:17:47.07:0,47,633	0/0:23,0:22:56.48:0,56,749	0/1:20,0:20:99:246,0,484	0/1:21,6:27:99:181,0,756	0/1:11,1:12:10.34:10,0,370	0/0:20,0:20:57.14:0,57,757	0/0:22,0:22:66.16:0,66,884	0/0:20,0:20:39.98:0,40,576	0/0:23,0:23:66.20:0,66,876	0/1:19,0:19:70.12:70,0,589	0/0:23,0:23:15.27:0,15,727	0/1:5,0:5:21.43:21,0,122	0/1:18,0:17:34.02:34,0,537	0/1:26,1:27:99:230,0,633	0/1:17,1:17:16.60:17,0,361	0/0:28,0:28:64.29:0,64,1022	0/0:21,0:21:48.15:0,48,644	0/0:22,0:22:45.62:0,46,624	0/1:27,0:27:99:332,0,631	0/1:23,6:29:99:342,0,667	0/1:35,0:35:99:391,0,798	0/1:5,4:9:99:125,0,181
chr10	78297507	.	C	CTT	1899.20	PASS	AB=0.876;AC=12;AF=0.214;AN=56;BaseQRankSum=12.775;DP=677;FS=0.452;HRun=0;HaplotypeScore=181.2145;InbreedingCoeff=-0.2728;MQ=61.72;MQ0=3;MQRankSum=-9.108;QD=7.63;ReadPosRankSum=2.108;VQSLOD=3.2082;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:26.50:0,27,916	0/0:8,0:8:24.08:0,24,373	0/0:43,0:19:36.49:0,36,429	0/0:78,0:29:21.28:0,21,409	0/0:24,0:24:42.66:0,43,866	0/0:25,0:25:75.23:0,75,1176	0/0:17,0:17:36.60:0,37,721	0/0:22,0:21:50.78:0,51,866	0/1:13,7:20:99:243,0,576	0/1:28,0:28:99:185,0,941	0/1:11,0:12:10.07:10,0,455	0/0:20,0:20:57.15:0,57,896	0/0:22,0:22:63.22:0,63,1020	0/0:20,0:20:28.61:0,29,659	0/0:24,0:24:66.22:0,66,1033	0/1:16,3:19:76.66:77,0,684	0/0:23,1:24:10.68:0,11,884	0/1:5,0:5:32.22:32,0,158	0/1:15,2:17:40:40,0,671	0/1:21,6:27:99:201,0,819	0/1:18,2:19:39.35:39,0,447	0/0:29,0:29:73.58:0,74,1232	0/0:22,0:22:48.07:0,48,766	0/0:22,0:22:46.04:0,46,736	0/1:17,10:27:99:324,0,751	0/1:25,4:29:99:358,0,813	0/1:24,12:36:99:408,0,965	0/1:9,0:9:99:133,0,208
chr10	78297514	.	TC	T	746.07	PASS	AB=0.825;AC=9;AF=0.161;AN=56;BaseQRankSum=12.472;DP=704;FS=3.831;HRun=2;HaplotypeScore=162.6721;InbreedingCoeff=-0.1960;MQ=62.42;MQ0=6;MQRankSum=-9.546;QD=3.59;ReadPosRankSum=-0.201;VQSLOD=0.2431;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.21:0,69,1060	0/0:9,0:9:27.06:0,27,402	0/0:49,0:19:29.22:0,29,403	0/0:89,0:31:32.92:0,33,486	0/0:26,0:26:49.33:0,49,1071	0/0:24,0:24:72.21:0,72,1102	0/0:16,0:17:45.90:0,46,686	0/0:23,0:23:66.22:0,66,1037	0/1:15,3:20:78.76:79,0,656	0/1:24,6:30:92.63:93,0,1003	0/0:10,1:11:8.47:0,8,454	0/0:22,0:22:60.20:0,60,947	0/0:20,0:20:60.20:0,60,956	0/0:21,0:21:24.65:0,25,647	0/0:25,0:25:72.24:0,72,1134	0/1:17,3:20:33.48:33,0,739	0/0:24,1:25:47.13:0,47,1010	0/1:6,1:7:51.97:52,0,194	0/0:18,0:18:51.17:0,51,802	0/1:23,5:29:67.75:68,0,893	0/0:14,0:17:13.17:0,13,456	0/0:28,0:28:72.24:0,72,1136	0/0:21,0:21:48.03:0,48,754	0/0:22,0:22:51.17:0,51,814	0/1:19,8:27:99:187,0,829	0/1:19,6:25:99:101,0,835	0/1:29,7:41:99:200,0,1258	0/1:5,4:9:74.24:74,0,212
chr10	78297518	.	C	CTT	1527.16	PASS	AB=0.841;AC=10;AF=0.179;AN=56;BaseQRankSum=12.305;DP=713;FS=3.778;HRun=0;HaplotypeScore=171.3537;InbreedingCoeff=-0.2309;MQ=62.47;MQ0=7;MQRankSum=-8.605;QD=5.04;ReadPosRankSum=-2.114;VQSLOD=3.0562;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.23:0,66,1073	0/0:11,0:11:30.10:0,30,473	0/0:51,0:19:32.49:0,32,422	0/1:92,0:32:26.48:26,0,402	0/0:26,0:26:71.99:0,72,1129	0/0:23,0:23:69.24:0,69,1125	0/0:19,0:19:30.06:0,30,663	0/0:24,0:24:69.22:0,69,1082	0/1:17,3:20:99:140,0,673	0/1:22,6:28:99:196,0,992	0/0:11,1:12:0.18:0,0,456	0/0:22,0:22:63.20:0,63,980	0/0:21,0:21:63.17:0,63,995	0/0:22,0:22:52.72:0,53,786	0/0:26,0:26:75.26:0,75,1217	0/1:17,3:20:99:118,0,682	0/0:25,0:25:61.52:0,62,1070	0/1:5,1:7:25.73:26,0,215	0/0:17,0:17:21.09:0,21,678	0/1:25,4:29:99:102,0,952	0/0:17,0:16:19.48:0,19,462	0/0:26,0:26:69.23:0,69,1099	0/0:21,0:21:51.08:0,51,792	0/0:21,0:21:51.17:0,51,819	0/1:19,8:27:99:341,0,825	0/1:19,6:25:99:196,0,854	0/1:35,7:42:99:389,0,1303	0/1:5,4:9:99:136,0,210
chr10	78298627	.	CT	C	2478.35	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.939;DP=522;FS=3.697;HRun=9;HaplotypeScore=72.2328;InbreedingCoeff=0.9719;MQ=80.56;MQ0=2;MQRankSum=0.587;QD=21.55;ReadPosRankSum=-1.064;VQSLOD=4.0456;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:42.12:0,42,485	0/0:9,0:9:20.89:0,21,222	0/0:24,1:23:7.90:0,8,296	0/0:12,0:9:17.04:0,17,158	0/0:21,0:21:63.18:0,63,719	0/0:19,0:19:54.16:0,54,623	0/0:15,0:15:36.11:0,36,415	1/1:4,24:28:75.02:684,75,0	0/0:15,0:15:36.08:0,36,394	0/0:33,0:34:74.13:0,74,1024	0/0:15,0:15:42.10:0,42,461	0/0:14,0:14:36.11:0,36,415	0/0:14,0:14:39.12:0,39,450	0/0:18,1:20:29.53:0,30,575	0/0:15,1:16:14.61:0,15,399	0/0:17,0:17:48.14:0,48,554	0/0:17,0:17:48.14:0,48,554	0/0:12,0:12:36.11:0,36,415	1/1:5,15:20:44.97:404,45,0	1/1:2,32:34:84.02:769,84,0	1/1:1,11:12:30.02:275,30,0	0/0:21,0:21:57.17:0,57,653	0/0:14,0:14:33.09:0,33,372	0/0:25,0:25:60.17:0,60,683	0/0:20,0:19:32.20:0,32,551	0/0:33,0:33:87.25:0,87,995	1/1:1,20:21:57.03:522,57,0	0/0:5,0:5:15.04:0,15,173
chr10	78299609	.	CAGAGAGACAGAT	C	2930.58	PASS	AB=0.525;AC=29;AF=0.537;AN=54;BaseQRankSum=3.302;DP=546;FS=23.051;HRun=0;HaplotypeScore=145.5931;InbreedingCoeff=0.7687;MQ=52.60;MQ0=15;MQRankSum=-0.649;QD=11.68;ReadPosRankSum=1.604;VQSLOD=1.3085;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:39.03:0,39,1135	1/1:3,0:3:5.90:37,6,0	0/0:45,0:18:44.82:0,45,618	0/0:75,0:27:47.85:0,48,867	1/1:10,17:26:2.96:19,3,0	0/0:18,0:18:29.71:0,30,1111	0/0:15,0:15:33.10:0,33,855	1/1:22,0:19:32.94:399,33,0	0/0:2,12:14:0:0,0,0	1/1:10,15:24:35.75:521,36,0	./.	0/0:16,0:16:10.68:0,11,251	0/0:19,0:19:23.09:0,23,313	1/1:0,20:20:6.02:112,6,0	0/1:2,19:21:0.03:0,0,0	1/1:12,0:12:11.24:109,11,0	1/1:4,0:4:8.91:87,9,0	0/0:14,0:14:25.31:0,25,542	1/1:5,6:8:19.84:221,20,0	1/1:3,11:14:3.01:108,3,0	1/1:20,0:20:12.01:197,12,0	0/0:9,0:9:5.98:0,6,118	0/0:19,0:18:23.83:0,24,276	0/0:16,0:16:6.89:0,7,146	1/1:5,13:18:3.01:36,3,0	1/1:3,22:24:65.68:906,66,0	1/1:5,21:26:9.03:282,9,0	1/1:3,0:3:6:91,6,0
chr10	78301415	.	AT	A	5058.98	PASS	AC=50;AF=0.962;AN=52;BaseQRankSum=-2.435;DP=235;FS=0.000;HRun=7;HaplotypeScore=63.4660;InbreedingCoeff=0.4163;MQ=63.83;MQ0=0;MQRankSum=-2.406;QD=22.29;ReadPosRankSum=1.250;VQSLOD=4.4430;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:12.03:122,12,0	1/1:0,5:5:15.03:153,15,0	1/1:2,2:4:5.95:49,6,0	0/0:5,0:5:4.81:0,5,28	1/1:4,13:17:27.06:275,27,0	1/1:3,8:11:24.05:244,24,0	1/1:4,4:8:15.03:152,15,0	1/1:9,17:26:60.11:602,60,0	1/1:2,4:6:12.03:122,12,0	1/1:3,7:10:24.05:245,24,0	1/1:1,2:3:6:55,6,0	1/1:0,5:5:15.03:153,15,0	1/1:1,7:8:21.05:214,21,0	1/1:0,3:3:9.02:92,9,0	1/1:2,5:7:18.03:177,18,0	1/1:4,5:9:18.02:177,18,0	1/1:2,1:3:3.01:31,3,0	1/1:1,5:6:18:173,18,0	1/1:1,15:16:44.60:458,45,0	1/1:3,13:16:39.08:397,39,0	./.	1/1:2,4:6:15.03:153,15,0	1/1:2,7:9:18.04:183,18,0	1/1:0,3:3:2.96:31,3,0	1/1:3,11:14:36.04:356,36,0	1/1:5,8:13:33.05:325,33,0	1/1:7,4:11:12.02:122,12,0	./.
chr10	78310473	.	A	AT	1689.04	PASS	AC=32;AF=0.640;AN=50;BaseQRankSum=-1.077;DP=167;FS=54.841;HRun=5;HaplotypeScore=23.3394;InbreedingCoeff=0.6623;MQ=63.72;MQ0=0;MQRankSum=-4.609;QD=21.94;ReadPosRankSum=-0.812;VQSLOD=-0.4984;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:87.17:0,87,921	1/1:0,3:3:6.02:76,6,0	0/0:3,0:3:3.01:0,3,32	0/0:7,0:7:4.11:0,4,56	1/1:1,3:4:1.82:5,2,0	0/0:21,0:21:54.12:0,54,572	0/0:9,0:9:18.04:0,18,192	1/1:2,15:17:16.58:551,17,0	1/1:0,3:3:9.03:118,9,0	1/1:1,6:7:12.04:156,12,0	1/1:0,2:2:3.01:39,3,0	0/0:2,0:2:6.02:0,6,64	0/0:5,0:5:15.02:0,15,152	1/1:0,2:2:6.02:79,6,0	1/1:1,3:4:3.01:39,3,0	1/1:0,3:3:6.02:79,6,0	1/1:0,6:6:15.05:197,15,0	0/0:6,0:6:15.04:0,15,161	1/1:0,3:3:9.03:116,9,0	1/1:0,4:4:6.02:79,6,0	1/1:1,0:1:3.01:37,3,0	./.	./.	0/0:1,0:1:3.01:0,3,32	1/1:6,3:8:9.23:55,9,0	1/1:0,5:5:12.04:156,12,0	1/1:0,4:4:6.02:79,6,0	./.
chr10	78310764	.	A	ATTGTCAATATACATGC	3046.09	PASS	AB=0.783;AC=34;AF=0.944;AN=36;BaseQRankSum=-1.449;DP=55;FS=9.613;HRun=0;HaplotypeScore=27.4177;InbreedingCoeff=-0.1940;MQ=138.66;MQ0=0;MQRankSum=-2.021;QD=62.17;ReadPosRankSum=-0.919;VQSLOD=0.9634;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:9.03:206,9,0	./.	0/1:3,1:6:63.40:610,0,63	0/1:8,0:9:33.91:645,0,34	./.	1/1:2,0:2:6.02:147,6,0	1/1:2,0:2:6.01:99,6,0	1/1:8,0:8:24.08:527,24,0	1/1:2,0:2:6.01:63,6,0	1/1:1,0:1:3.01:104,3,0	./.	1/1:1,0:1:3.01:75,3,0	1/1:2,0:2:6.02:195,6,0	./.	1/1:2,0:2:6.01:77,6,0	1/1:1,0:1:3.01:40,3,0	1/1:1,0:1:3.01:37,3,0	./.	1/1:2,0:2:5.98:49,6,0	1/1:1,0:1:3.01:76,3,0	./.	./.	./.	./.	1/1:2,0:2:3.01:41,3,0	1/1:1,0:1:3.01:74,3,0	1/1:3,0:3:6.02:76,6,0	./.
chr10	78311910	.	GA	G	5590.80	PASS	AB=0.751;AC=43;AF=0.768;AN=56;BaseQRankSum=2.862;DP=527;FS=0.000;HRun=11;HaplotypeScore=82.2848;InbreedingCoeff=0.5675;MQ=67.03;MQ0=9;MQRankSum=-2.513;QD=13.12;ReadPosRankSum=1.785;VQSLOD=4.9817;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:26:62.10:0,62,654	1/1:2,3:6:11.02:80,11,0	0/0:39,0:17:23.64:0,24,185	0/1:35,1:18:1.58:2,0,117	1/1:9,15:26:7.99:250,8,0	0/0:17,1:18:17.41:0,17,378	0/1:19,3:23:11.64:12,0,528	1/1:12,14:25:21.91:385,22,0	1/1:6,11:17:40.99:326,41,0	1/1:15,4:19:20.95:172,21,0	1/1:7,9:17:28.89:217,29,0	0/1:5,11:16:1.63:170,0,2	1/1:1,8:10:26.01:203,26,0	1/1:4,9:13:26.97:222,27,0	1/1:6,13:19:15.91:331,16,0	1/1:5,13:19:14.95:315,15,0	1/1:5,8:13:29.82:230,30,0	0/0:4,0:18:43.02:0,43,240	0/1:5,3:9:11.64:102,0,12	1/1:3,12:16:43.97:348,44,0	0/1:4,5:9:5.42:96,0,5	1/1:4,18:24:50.43:400,50,0	1/1:3,20:23:15.99:337,16,0	1/1:5,15:20:44.74:357,45,0	1/1:6,12:21:44.94:328,45,0	1/1:9,9:19:38.89:316,39,0	1/1:9,12:22:17.99:343,18,0	1/1:0,2:2:5.99:49,6,0
chr10	78311944	.	C	CA	9620.79	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-6.615;DP=577;FS=17.056;HRun=7;HaplotypeScore=78.8594;InbreedingCoeff=0.9880;MQ=67.21;MQ0=2;MQRankSum=-0.491;QD=28.98;ReadPosRankSum=-0.278;VQSLOD=3.3165;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:81.12:0,81,780	1/1:0,9:9:24.07:290,24,0	0/0:27,0:16:29.89:0,30,262	0/0:29,0:17:20.58:0,21,183	1/1:4,29:33:75.20:895,75,0	0/0:17,0:17:28.68:0,29,363	0/0:20,0:20:51.08:0,51,492	1/1:8,39:47:99:1447,120,0	1/1:1,14:15:39.12:471,39,0	1/1:2,9:11:27.08:321,27,0	1/1:6,16:22:42.13:507,42,0	0/0:13,0:13:36.06:0,36,347	0/0:20,0:20:57.09:0,57,550	1/1:2,11:13:30.09:362,30,0	1/1:2,19:22:60.18:724,60,0	1/1:2,17:19:51.16:616,51,0	1/1:2,15:17:45.14:543,45,0	0/0:20,0:20:57.06:0,57,542	1/1:4,13:16:39.10:449,39,0	1/1:2,20:22:54.12:626,54,0	1/1:3,7:10:15.04:172,15,0	0/0:22,0:22:66.09:0,66,632	0/0:25,0:25:54.08:0,54,521	0/0:20,0:20:54.08:0,54,521	1/1:6,19:25:54.16:641,54,0	1/1:3,22:25:66.20:797,66,0	1/1:1,19:21:54.17:651,54,0	1/1:0,4:4:9.03:109,9,0
chr10	78313008	.	AT	A	2374.21	PASS	AB=0.917;AC=11;AF=0.196;AN=56;BaseQRankSum=10.579;DP=603;FS=9.335;HRun=9;HaplotypeScore=58.6826;InbreedingCoeff=0.8707;MQ=71.17;MQ0=0;MQRankSum=-0.320;QD=19.95;ReadPosRankSum=-2.040;VQSLOD=3.0800;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.24:0,84,961	0/0:14,0:14:42.12:0,42,476	0/1:10,1:11:6.49:6,0,166	0/0:18,1:17:6.03:0,6,292	0/0:24,0:24:69.20:0,69,795	0/0:19,0:19:57.17:0,57,657	0/0:19,0:19:57.17:0,57,658	1/1:1,25:25:72.01:650,72,0	0/0:19,0:19:51.15:0,51,588	0/0:20,0:20:54.16:0,54,622	0/0:27,0:27:75.22:0,75,865	0/0:18,0:18:48.14:0,48,554	0/0:22,2:24:8.25:0,8,603	0/0:21,0:21:54.16:0,54,622	0/0:32,0:32:93.27:0,93,1064	0/0:21,0:21:60.18:0,60,692	0/0:29,0:29:75.19:0,75,844	0/0:23,0:23:66.17:0,66,746	1/1:3,14:16:39.02:357,39,0	1/1:2,18:20:51.02:467,51,0	1/1:1,17:18:48.03:439,48,0	0/0:23,0:23:66.19:0,66,757	0/0:28,0:28:72.21:0,72,830	0/0:16,0:16:45.13:0,45,519	0/0:20,0:20:57.17:0,57,658	0/0:29,0:29:78.20:0,78,879	1/1:4,23:27:69.04:632,69,0	0/0:7,0:7:21.06:0,21,242
chr10	78314774	.	CAGAG	C	7523.34	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=8.486;DP=366;FS=2.606;HRun=0;HaplotypeScore=94.3763;InbreedingCoeff=0.9057;MQ=78.99;MQ0=0;MQRankSum=-5.320;QD=27.06;ReadPosRankSum=2.337;VQSLOD=4.9156;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.18:0,57,1405	1/1:4,0:4:12.04:149,12,0	0/0:20,0:20:30.01:0,30,927	0/0:17,0:16:30.82:0,31,735	1/1:21,0:21:45.01:509,45,0	0/0:10,0:10:14.97:0,15,386	0/0:15,0:15:39.09:0,39,821	1/1:13,1:14:30.08:382,30,0	1/1:13,0:13:36.11:462,36,0	1/1:21,2:23:54.14:721,54,0	1/1:14,0:14:39.12:520,39,0	1/1:4,0:4:5.98:69,6,0	1/1:4,3:7:8.73:89,9,0	1/1:27,0:27:60.17:757,60,0	1/1:14,0:14:21.06:269,21,0	1/1:16,0:16:36.11:442,36,0	1/1:12,0:12:21.02:234,21,0	0/0:3,0:3:9.03:0,9,199	1/1:7,0:7:21.04:247,21,0	1/1:15,0:15:33.10:450,33,0	1/1:23,0:23:42.11:560,42,0	1/1:5,0:5:11.76:95,12,0	1/1:11,0:11:14.77:127,15,0	1/1:9,0:9:11.10:66,11,0	1/1:7,1:8:21.07:303,21,0	1/1:14,0:14:39.08:481,39,0	1/1:13,1:14:39.11:513,39,0	1/1:3,0:3:6.02:78,6,0
chr10	78314778	.	GAGA	G	10426.51	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=7.082;DP=362;FS=1.822;HRun=0;HaplotypeScore=78.3680;InbreedingCoeff=0.8580;MQ=76.07;MQ0=0;MQRankSum=-6.285;QD=34.87;ReadPosRankSum=1.756;VQSLOD=5.5400;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.18:0,60,1268	1/1:0,4:4:12.04:223,12,0	0/1:19,0:18:1.57:2,0,837	0/0:18,0:15:39.51:0,40,706	1/1:2,18:20:45.09:745,45,0	0/0:6,0:6:14.13:0,14,338	0/0:13,0:13:39.09:0,39,737	1/1:1,14:15:35.97:530,36,0	1/1:0,16:16:36.12:670,36,0	1/1:3,17:20:56.99:884,57,0	1/1:1,14:15:39.13:699,39,0	1/1:10,0:11:13.09:119,13,0	1/1:6,0:8:11.26:97,11,0	1/1:2,25:27:60.20:1095,60,0	1/1:1,15:16:24.08:429,24,0	1/1:0,14:14:36.12:670,36,0	1/1:0,10:10:21.03:355,21,0	0/0:4,0:4:9.03:0,9,157	1/1:1,7:8:24.01:347,24,0	1/1:2,13:15:39.10:612,39,0	1/1:1,19:20:42.14:713,42,0	1/1:3,1:7:9.57:133,10,0	1/1:3,1:10:15.04:203,15,0	1/1:2,0:6:12.03:128,12,0	1/1:1,8:9:21.07:344,21,0	1/1:0,13:13:39.10:632,39,0	1/1:1,13:14:39.13:684,39,0	1/1:0,2:2:6.02:112,6,0
chr10	78314780	.	GA	G	3043.31	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=8.311;DP=368;FS=3.580;HRun=1;HaplotypeScore=93.1368;InbreedingCoeff=0.9309;MQ=73.61;MQ0=0;MQRankSum=-5.136;QD=10.53;ReadPosRankSum=1.388;VQSLOD=1.7731;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.15:0,57,761	1/1:4,0:4:11.36:56,11,0	0/0:19,0:18:18.79:0,19,482	0/0:18,0:14:38.27:0,38,427	1/1:20,0:20:39.55:202,40,0	0/0:6,0:6:14.13:0,14,208	0/0:11,0:11:30.08:0,30,403	1/1:16,0:16:33.11:175,33,0	1/1:16,0:16:34.09:167,34,0	1/1:20,0:20:47.62:260,48,0	1/1:15,0:15:36.96:183,37,0	1/1:12,1:13:19.05:134,19,0	1/1:9,2:11:15.42:103,15,0	1/1:27,0:27:56.96:285,57,0	1/1:16,0:16:22.73:111,23,0	1/1:14,0:14:34.09:168,34,0	1/1:10,0:10:17.04:84,17,0	0/0:5,0:5:8.89:0,9,78	1/1:8,0:8:17.13:89,17,0	1/1:15,0:15:37.32:198,37,0	1/1:20,0:20:39.92:201,40,0	1/1:7,3:10:15.82:138,16,0	1/1:4,6:10:14.79:108,15,0	1/1:2,4:6:11.96:97,12,0	1/1:9,0:9:18.32:88,18,0	1/1:13,0:13:31.67:178,32,0	1/1:14,0:14:35.78:178,36,0	1/1:2,0:2:5.68:28,6,0
chr10	78314790	.	G	GA	4682.24	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=5.356;DP=378;FS=8.491;HRun=1;HaplotypeScore=90.5391;InbreedingCoeff=0.9103;MQ=68.20;MQ0=0;MQRankSum=-3.137;QD=19.19;ReadPosRankSum=2.756;VQSLOD=4.6420;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:59.15:0,59,720	1/1:4,0:4:11.94:91,12,0	0/0:19,0:17:39.70:0,40,434	0/0:19,0:14:34.47:0,34,352	1/1:16,2:18:40.75:317,41,0	0/0:7,0:7:18.05:0,18,218	0/0:13,0:13:39.07:0,39,437	1/1:20,1:21:56.27:463,56,0	1/1:16,0:16:38.85:315,39,0	1/1:17,1:18:49.71:425,50,0	1/1:15,1:16:41.28:321,41,0	0/0:15,0:15:33.99:0,34,266	0/0:13,0:13:20.97:0,21,154	1/1:24,2:26:64.83:479,65,0	1/1:14,1:15:26.89:244,27,0	1/1:12,0:12:35.64:269,36,0	1/1:10,0:10:20.78:143,21,0	0/1:5,0:5:6.20:6,0,31	1/1:10,1:11:32.95:294,33,0	1/1:15,2:17:44.74:384,45,0	1/1:19,1:20:38.53:287,39,0	0/0:12,0:12:16.79:0,17,117	0/0:9,0:9:20.34:0,20,130	0/0:6,0:6:14.52:0,15,90	1/1:8,0:8:17.86:138,18,0	1/1:10,0:10:26.40:206,26,0	1/1:14,0:14:31.14:253,31,0	1/1:3,0:3:5.99:50,6,0
chr10	78316962	.	CT	C	5429.96	PASS	AB=0.538;AC=33;AF=0.589;AN=56;BaseQRankSum=12.857;DP=484;FS=85.631;HRun=2;HaplotypeScore=164.4729;InbreedingCoeff=0.9132;MQ=76.14;MQ0=1;MQRankSum=-14.193;QD=26.75;ReadPosRankSum=1.802;VQSLOD=0.1056;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1645	1/1:0,7:7:21.01:252,21,0	0/0:44,1:44:99:0,131,1835	0/0:33,0:26:74.65:0,75,1002	1/1:2,8:10:18.01:171,18,0	0/0:22,0:22:63.20:0,63,923	0/0:22,0:22:63.21:0,63,934	1/1:0,13:11:33.11:426,33,0	1/1:2,13:15:36.06:392,36,0	1/1:3,13:16:42.09:477,42,0	1/1:1,9:10:19.74:206,20,0	0/0:26,0:26:54.18:0,54,800	0/0:22,1:23:12.37:0,12,659	0/1:2,12:14:6.43:346,0,6	1/1:2,6:8:17.20:162,17,0	1/1:0,15:15:44.68:431,45,0	1/1:1,9:10:21.01:203,21,0	0/0:12,0:12:21.07:0,21,315	1/1:0,8:8:18.03:199,18,0	1/1:0,15:15:29.91:313,30,0	1/1:1,3:4:6.02:78,6,0	0/0:21,0:21:45.15:0,45,672	0/0:15,0:15:24.02:0,24,359	0/0:25,0:25:48.15:0,48,710	1/1:0,13:13:26.24:390,26,0	1/1:1,15:16:48.11:533,48,0	1/1:1,20:21:60.10:656,60,0	1/1:1,7:8:18.03:194,18,0
chr10	78316965	.	C	CTAAGAATAAAAA	30751.50	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=15.030;DP=564;FS=96.028;HRun=0;HaplotypeScore=291.2184;InbreedingCoeff=0.9094;MQ=72.94;MQ0=1;MQRankSum=-16.371;QD=102.85;ReadPosRankSum=-1.729;VQSLOD=1.7696;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,105,3716	1/1:8,1:9:18.02:653,18,0	0/0:48,0:47:99:0,120,3964	0/0:37,0:30:74.92:0,75,2335	1/1:8,6:14:31.66:1284,32,0	0/0:23,0:23:66.23:0,66,2274	0/0:21,0:21:54.19:0,54,1922	1/1:22,0:20:42.11:1801,42,0	1/1:13,7:20:48.16:2450,48,0	1/1:9,6:15:39.09:1782,39,0	1/1:5,6:11:27.09:1166,27,0	0/0:25,0:25:45.15:0,45,1660	0/1:23,0:23:99:128,0,1358	1/1:18,4:22:42.07:2135,42,0	1/1:9,3:12:27.04:1085,27,0	1/1:14,10:24:66.23:3287,66,0	1/1:7,5:12:33.04:1381,33,0	0/0:12,0:12:18.02:0,18,579	1/1:6,2:8:18.06:860,18,0	1/1:12,10:22:60.21:2667,60,0	1/1:5,0:4:8.99:248,9,0	0/0:19,0:19:45.12:0,45,1033	0/0:14,0:14:16.43:0,16,721	0/0:26,0:26:41.89:0,42,1293	1/1:9,6:15:30.10:1435,30,0	1/1:18,8:26:69.19:3426,69,0	1/1:18,10:28:78.23:3874,78,0	1/1:7,3:11:24.08:1087,24,0
chr10	78316988	.	GTCTCTGTCTCTCTGTC	G	1889.23	PASS	AB=0.938;AC=19;AF=0.352;AN=54;BaseQRankSum=3.203;DP=548;FS=1.498;HRun=0;HaplotypeScore=327.2546;InbreedingCoeff=0.3663;MQ=66.62;MQ0=4;MQRankSum=-4.110;QD=8.51;ReadPosRankSum=0.145;VQSLOD=1.2282;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:72.25:0,72,3164	0/0:3,0:3:2.81:0,3,44	0/0:42,0:29:23.83:0,24,320	0/0:48,0:34:10.69:0,11,416	1/1:21,0:20:2.03:5,2,0	0/0:20,0:20:36.12:0,36,1489	0/0:20,0:20:51.17:0,51,1800	0/0:39,0:36:22.38:0,22,463	0/1:18,0:18:13.33:13,0,71	0/0:7,0:7:6.01:0,6,64	./.	1/1:9,14:23:6.69:398,7,0	0/1:4,13:17:1.30:519,0,1	0/0:15,0:15:0.73:0,1,50	1/1:10,0:10:2.92:7,3,0	0/0:24,0:24:5.70:0,6,106	0/0:10,0:10:5.98:0,6,61	0/0:4,0:12:14.87:0,15,171	0/0:14,0:13:8.96:0,9,280	0/0:28,0:27:8.35:0,8,142	0/1:5,0:5:0:0,0,0	1/1:2,13:15:12.04:535,12,0	1/1:11,0:11:6.02:184,6,0	1/1:22,0:22:9.03:314,9,0	0/1:24,0:24:0.51:1,0,1	0/1:25,0:25:33.93:34,0,451	0/1:23,0:23:2.72:3,0,525	0/1:8,0:8:29.52:30,0,140
chr10	78316996	.	C	CACTCTG	2316.53	PASS	AB=1.000;AC=28;AF=0.538;AN=52;BaseQRankSum=10.583;DP=534;FS=8.713;HRun=0;HaplotypeScore=253.8905;InbreedingCoeff=0.4245;MQ=57.40;MQ0=7;MQRankSum=-8.903;QD=7.52;ReadPosRankSum=1.716;VQSLOD=0.5019;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.07:0,87,1942	1/1:3,0:3:7.02:37,7,0	0/0:34,0:21:52.93:0,53,771	0/0:43,0:29:46.09:0,46,855	1/1:21,0:20:0.46:1,0,0	0/0:21,0:21:48.12:0,48,1030	0/0:22,0:22:63.18:0,63,1400	0/1:43,0:36:88.08:442,0,88	1/1:17,0:17:9.49:103,9,0	0/1:8,0:7:11.54:46,0,12	1/1:13,0:11:0.47:1,0,0	0/0:19,0:19:21.03:0,21,240	0/1:17,0:17:2.43:2,0,142	0/0:15,0:15:2.45:0,2,23	./.	1/1:21,0:21:26.88:147,27,0	1/1:9,0:9:17.42:109,17,0	0/0:12,0:12:20.95:0,21,232	1/1:11,2:12:5.74:358,6,0	1/1:26,3:28:12.03:116,12,0	./.	0/0:15,0:15:17.46:0,17,165	0/1:12,0:12:13.71:28,0,14	0/1:25,0:25:32.05:32,0,43	1/1:24,0:23:2.11:6,2,0	0/1:23,0:23:19.75:357,0,20	1/1:22,0:22:42.49:529,42,0	1/1:8,0:8:17.47:179,17,0
chr10	78317002	.	GTC	G	1545.87	PASS	AB=0.851;AC=30;AF=0.577;AN=52;BaseQRankSum=8.443;DP=512;FS=2.450;HRun=0;HaplotypeScore=222.5057;InbreedingCoeff=0.2745;MQ=54.88;MQ0=7;MQRankSum=-7.762;QD=4.47;ReadPosRankSum=2.448;VQSLOD=3.1231;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.27:0,78,1361	0/1:3,1:4:1.78:32,0,2	0/0:24,1:12:20.14:0,20,279	0/1:40,0:27:2.88:3,0,316	0/1:13,8:20:0:1,0,0	0/0:19,0:19:45.15:0,45,787	0/0:23,0:23:66.23:0,66,1140	0/1:39,4:36:14.44:167,0,14	1/1:7,10:17:11.52:120,12,0	0/1:9,2:10:24.15:70,0,24	./.	1/1:16,0:16:6.36:45,6,0	1/1:15,0:15:11.81:91,12,0	0/1:6,8:14:0.06:0,0,22	1/1:5,4:9:3.92:13,4,0	1/1:12,9:21:20.17:142,20,0	0/1:4,2:8:12.68:43,0,13	0/1:13,0:13:7.71:8,0,73	0/1:11,1:11:5.09:37,0,5	0/0:22,6:27:5.64:0,6,17	./.	1/1:14,0:14:11.63:66,12,0	1/1:0,12:12:5.79:60,6,0	1/1:5,18:24:12.03:131,12,0	0/0:15,9:24:0.80:0,1,2	1/1:8,15:23:47.48:487,47,0	0/1:17,3:20:20.17:108,0,20	1/1:5,4:9:9.25:85,9,0
chr10	78317003	.	T	TCA	347.26	PASS	AB=0.937;AC=14;AF=0.259;AN=54;BaseQRankSum=3.691;DP=514;FS=3.665;HRun=0;HaplotypeScore=231.7889;InbreedingCoeff=0.1681;MQ=54.53;MQ0=7;MQRankSum=-4.469;QD=1.76;ReadPosRankSum=-4.602;VQSLOD=1.3408;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.26:0,78,1190	0/0:4,0:4:8.99:0,9,102	0/0:25,0:12:29.99:0,30,359	0/0:40,0:27:11.92:0,12,406	1/1:21,0:20:1.28:2,1,0	0/0:18,0:18:45.15:0,45,689	0/0:23,0:23:69.22:0,69,1030	0/1:42,4:38:99:318,0,721	0/0:18,0:18:11.83:0,12,89	0/1:12,0:11:26.65:27,0,92	1/1:14,0:11:0.47:1,0,0	0/0:16,0:16:11.37:0,11,56	0/0:15,0:15:8.24:0,8,35	0/1:14,0:14:0.66:1,0,39	1/1:9,0:9:3.92:13,4,0	0/0:21,0:21:27.33:0,27,212	0/0:8,0:8:5.55:0,6,63	0/0:13,0:13:23.89:0,24,245	0/1:6,2:7:61.08:61,0,101	0/1:25,3:27:6.65:7,0,50	./.	0/0:14,0:14:11.50:0,12,59	0/0:12,0:12:0.69:0,1,3	0/0:24,0:24:5.22:0,5,25	1/1:25,0:24:2.25:5,2,0	0/0:23,0:23:64.76:0,65,553	0/1:20,0:20:36.09:36,0,212	0/0:9,0:9:18.34:0,18,157
chr10	78317008	.	CTG	C	558.37	PASS	AB=0.959;AC=22;AF=0.423;AN=52;BaseQRankSum=7.526;DP=501;FS=1.784;HRun=0;HaplotypeScore=206.6481;InbreedingCoeff=-0.3455;MQ=50.54;MQ0=9;MQRankSum=-6.762;QD=1.82;ReadPosRankSum=2.477;VQSLOD=2.6729;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:86.22:0,86,1432	0/1:4,0:4:11.95:12,0,27	0/1:19,0:8:3.46:3,0,173	0/1:33,0:20:29.16:29,0,226	0/1:19,2:19:0:1,0,0	0/0:21,0:20:48.15:0,48,890	0/0:22,0:22:66.20:0,66,1197	0/0:46,0:38:60.83:0,61,507	1/1:15,2:17:3.06:51,3,0	0/1:11,0:10:28.22:28,0,30	./.	0/1:16,2:18:28.78:34,0,29	0/1:17,0:17:32.78:33,0,68	0/1:13,0:13:0.05:0,0,25	1/1:9,0:9:3.92:13,4,0	0/1:14,4:18:3.73:105,0,4	0/1:6,2:8:25.23:35,0,25	0/1:12,0:12:36.04:36,0,60	0/1:5,0:5:10.43:10,0,47	0/0:25,4:28:9.53:0,10,58	./.	0/1:16,0:17:24.84:33,0,25	0/1:14,0:14:14.05:14,0,34	0/1:25,0:25:11:21,0,11	0/0:21,4:24:0.80:0,1,2	0/1:20,0:20:38.33:155,0,38	0/1:15,2:17:62.73:63,0,114	0/1:9,0:9:24.67:25,0,25
chr10	78317010	.	G	GTC	249.59	PASS	AB=0.947;AC=13;AF=0.250;AN=52;BaseQRankSum=4.897;DP=513;FS=12.766;HRun=0;HaplotypeScore=216.7921;InbreedingCoeff=-0.0240;MQ=48.96;MQ0=10;MQRankSum=-5.759;QD=1.23;ReadPosRankSum=-2.348;VQSLOD=1.2314;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:71.22:0,71,890	0/0:3,1:4:5.78:0,6,19	0/0:15,0:7:2.21:0,2,55	0/0:29,1:18:0.31:0,0,142	0/1:21,1:20:0.01:0,0,0	0/0:22,0:21:48.12:0,48,605	0/0:21,0:21:57.16:0,57,726	0/1:49,0:40:28.96:29,0,417	0/0:17,0:17:6.89:0,7,24	0/1:9,3:11:6.60:130,0,7	./.	0/0:19,0:19:14.64:0,15,125	0/0:17,0:17:1.07:0,1,149	0/1:13,0:13:0.14:0,0,24	1/1:9,0:9:3.92:13,4,0	0/1:18,0:18:33.79:65,0,34	0/1:7,2:9:16.20:21,0,16	0/0:13,0:13:0.79:0,1,109	0/0:5,0:5:8.84:0,9,49	0/0:29,2:30:1.53:0,2,11	./.	0/0:19,0:19:17.55:0,18,139	0/0:15,0:15:11.51:0,12,113	0/0:28,0:28:14.67:0,15,126	1/1:24,1:24:1.31:4,1,0	0/1:20,0:20:8.42:8,0,171	0/1:16,1:17:24.47:97,0,24	0/1:9,0:9:3.86:4,0,10
chr10	78317014	.	CTCTG	C	1407.63	PASS	AB=0.897;AC=20;AF=0.370;AN=54;BaseQRankSum=7.942;DP=522;FS=0.000;HRun=0;HaplotypeScore=223.2655;InbreedingCoeff=0.0610;MQ=49.00;MQ0=10;MQRankSum=-7.659;QD=4.68;ReadPosRankSum=5.540;VQSLOD=2.1096;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:84.29:0,84,1926	0/1:3,1:4:3.16:47,0,3	0/0:12,0:6:2.23:0,2,55	0/1:24,0:15:0.32:0,0,141	0/1:14,7:20:0:1,0,0	0/0:22,0:21:48.13:0,48,985	0/0:20,0:20:57.16:0,57,1189	0/1:47,3:41:68.33:68,0,405	1/1:7,10:17:9:131,9,0	0/1:11,2:13:1.29:129,0,1	./.	0/1:21,0:21:42.24:42,0,230	0/1:17,0:17:66.60:67,0,220	0/0:6,7:13:3:0,3,29	0/1:6,4:10:0:0,0,0	1/1:9,9:18:6.47:182,6,0	0/1:8,2:10:0.71:72,0,1	0/1:13,0:13:38.88:39,0,164	0/0:5,0:5:10.27:0,10,105	0/0:28,3:30:2.57:0,3,18	0/1:8,0:8:0:0,0,0	0/1:21,0:21:61.89:62,0,258	0/0:16,0:16:16.84:0,17,221	0/0:28,0:28:23.08:0,23,273	0/0:19,6:24:2.41:0,2,10	0/1:10,13:23:65.75:534,0,66	0/1:18,0:18:72.96:73,0,102	1/1:5,4:9:9.18:106,9,0
chr10	78317022	.	CTG	C	354.26	PASS	AB=0.987;AC=19;AF=0.339;AN=56;BaseQRankSum=7.498;DP=521;FS=1.872;HRun=0;HaplotypeScore=203.9293;InbreedingCoeff=0.0718;MQ=38.96;MQ0=10;MQRankSum=-7.672;QD=1.47;ReadPosRankSum=1.024;VQSLOD=2.7703;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:96.17:0,96,1698	0/1:4,0:4:0.27:0,0,13	1/1:2,0:1:2.04:6,2,0	0/0:13,0:5:8.96:0,9,83	0/1:24,0:22:0:1,0,0	0/0:18,0:17:36.12:0,36,684	0/0:20,0:20:60.18:0,60,1051	0/0:49,0:41:53.44:0,53,990	0/1:16,0:16:4.16:4,0,14	0/1:18,0:17:13.71:106,0,14	0/1:20,0:17:0:0,0,0	0/0:23,0:23:31.17:0,31,439	0/1:18,0:18:43.30:43,0,264	0/1:12,0:12:0.14:0,0,11	1/1:10,0:10:3.79:13,4,0	0/1:19,0:19:12.68:69,0,13	1/1:8,1:9:9.65:56,10,0	0/0:13,0:13:17.46:0,17,253	0/0:6,0:6:4.18:0,4,96	0/0:34,0:33:8.18:0,8,70	0/1:8,1:9:0.02:0,0,0	0/0:26,0:26:29.01:0,29,492	0/0:16,0:16:0.43:0,0,339	0/1:26,2:28:43.80:44,0,318	0/0:25,0:24:0.80:0,1,2	0/1:28,0:27:53.01:118,0,53	0/1:16,0:16:23.20:23,0,217	0/1:8,0:8:7.07:7,0,40
chr10	78317024	.	G	GTC	876.35	PASS	AB=0.989;AC=24;AF=0.444;AN=54;BaseQRankSum=8.310;DP=522;FS=4.480;HRun=0;HaplotypeScore=201.2127;InbreedingCoeff=0.2500;MQ=38.80;MQ0=13;MQRankSum=-9.081;QD=2.94;ReadPosRankSum=0.866;VQSLOD=2.4654;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:93.29:0,93,1245	1/1:3,1:4:2.99:24,3,0	./.	0/0:14,0:3:3.01:0,3,41	0/1:24,0:22:0.03:0,0,0	0/0:18,0:17:33.11:0,33,451	0/0:20,0:20:54.18:0,54,738	0/1:48,0:41:99:170,0,327	1/1:15,1:16:9:95,9,0	0/1:17,1:17:56.28:100,0,56	0/1:21,0:18:0:0,0,0	0/0:23,0:23:33.11:0,33,432	0/0:19,0:19:4.30:0,4,253	1/1:10,2:12:2.49:6,2,0	1/1:8,2:10:3.92:13,4,0	1/1:17,1:18:0.79:102,1,0	0/1:12,0:12:6.70:7,0,67	0/0:13,0:13:18.06:0,18,238	0/1:7,0:7:3.27:3,0,63	1/1:34,0:33:0.34:6,0,0	0/0:10,0:10:2.74:0,3,12	0/0:26,0:26:39.09:0,39,481	0/0:15,0:15:10.33:0,10,257	0/0:26,0:26:6.96:0,7,233	1/1:21,4:24:1.31:4,1,0	0/1:26,1:26:99:305,0,103	0/1:16,0:16:25:61,0,25	1/1:6,0:6:11.88:130,12,0
chr10	78317026	.	CTCTG	C	974.87	PASS	AB=0.937;AC=19;AF=0.339;AN=56;BaseQRankSum=7.477;DP=531;FS=0.563;HRun=0;HaplotypeScore=203.4000;InbreedingCoeff=0.1899;MQ=40.07;MQ0=14;MQRankSum=-8.388;QD=3.41;ReadPosRankSum=-0.554;VQSLOD=2.6100;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:90.27:0,90,2040	1/1:3,0:3:2.97:20,3,0	0/0:4,0:2:3.01:0,3,39	0/0:22,0:3:3.01:0,3,60	0/1:23,1:22:0.14:1,0,0	0/0:19,0:18:33.10:0,33,738	0/0:19,0:19:54.18:0,54,1213	0/1:46,0:39:67.63:68,0,324	0/1:13,2:15:0.67:32,0,1	1/1:18,0:17:19.43:182,19,0	0/0:19,2:18:2.74:0,3,12	0/0:23,0:23:27.82:0,28,547	0/1:20,0:20:51.91:52,0,377	0/1:12,0:12:0:0,0,0	0/1:9,0:9:0:0,0,0	1/1:13,5:18:8.01:200,8,0	1/1:11,2:13:12.49:128,12,0	0/0:13,0:13:15.68:0,16,323	0/0:8,0:8:10.19:0,10,217	0/1:27,6:32:12.34:33,0,12	0/0:9,2:11:0.38:0,0,1	0/0:26,0:26:27.24:0,27,649	0/0:16,0:16:13.69:0,14,498	0/1:26,0:26:11.11:11,0,451	0/0:20,5:24:2.41:0,2,10	0/1:23,4:26:55.28:296,0,55	0/1:14,2:16:80.16:80,0,144	0/1:5,1:6:12.26:27,0,12
chr10	78317030	.	G	GTC	1332.19	PASS	AB=0.980;AC=23;AF=0.442;AN=52;BaseQRankSum=8.739;DP=532;FS=5.844;HRun=0;HaplotypeScore=185.0116;InbreedingCoeff=0.4559;MQ=41.50;MQ0=15;MQRankSum=-7.954;QD=4.72;ReadPosRankSum=-0.257;VQSLOD=2.6419;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:81.25:0,81,1059	1/1:2,1:3:2.22:7,2,0	0/0:8,0:3:8.70:0,9,90	0/0:25,0:7:4.49:0,4,57	0/1:26,0:24:0.03:0,0,0	0/0:18,0:17:24.08:0,24,314	0/0:18,0:18:45.15:0,45,599	0/1:35,0:29:80.91:81,0,373	1/1:14,1:15:7.60:59,8,0	1/1:18,1:18:24.57:341,25,0	0/1:22,0:19:6.79:19,0,7	0/0:23,0:23:33.11:0,33,436	0/0:19,0:19:28.82:0,29,332	./.	./.	1/1:18,0:18:18.78:145,19,0	1/1:13,0:13:7.28:59,7,0	0/0:14,0:14:21.05:0,21,261	0/1:12,0:12:92.12:92,0,131	0/1:33,0:32:11:96,0,11	1/1:11,0:11:0.45:1,0,0	0/0:24,0:24:28.04:0,28,496	0/0:17,0:17:29.79:0,30,383	0/0:27,0:27:20.69:0,21,274	0/1:21,4:24:0.07:0,0,0	1/1:26,1:26:15.40:332,15,0	0/1:16,0:16:99:141,0,142	1/1:6,0:6:13.89:130,14,0
chr10	78317048	.	GTC	G	2509.92	PASS	AB=0.737;AC=21;AF=0.389;AN=54;BaseQRankSum=7.109;DP=634;FS=1.021;HRun=0;HaplotypeScore=195.2009;InbreedingCoeff=0.4152;MQ=49.28;MQ0=22;MQRankSum=-4.995;QD=8.42;ReadPosRankSum=-4.547;VQSLOD=2.5759;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:93.30:0,93,1482	./.	0/0:39,0:10:12.11:0,12,189	0/0:53,0:16:23.24:0,23,259	1/1:17,17:32:20.94:256,21,0	0/0:25,0:24:54.14:0,54,846	0/0:22,0:22:49.72:0,50,782	0/1:20,15:35:99:542,0,106	0/0:13,3:16:2.90:0,3,16	1/1:19,9:27:37.13:486,37,0	0/1:10,14:21:17.53:99,0,18	0/0:25,0:25:48.16:0,48,775	0/0:18,1:19:36.09:0,36,595	1/1:9,1:10:3:25,3,0	0/0:6,3:9:0:0,0,0	1/1:7,7:14:9.03:104,9,0	1/1:11,5:16:4.21:165,4,0	0/0:14,0:14:27.09:0,27,442	0/1:13,2:12:58.53:59,0,61	1/1:14,18:32:18.51:241,19,0	0/1:8,4:12:0.08:0,0,0	0/0:21,0:21:45.15:0,45,721	0/0:24,0:24:54.17:0,54,848	0/0:24,1:25:32.87:0,33,516	1/1:18,12:29:11.33:114,11,0	0/1:11,12:23:16.53:394,0,17	0/1:9,7:16:5.16:179,0,5	0/1:5,1:6:26.18:26,0,30
chr10	78317088	.	A	AAC	11790.74	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=2.152;DP=638;FS=2.923;HRun=0;HaplotypeScore=140.6038;InbreedingCoeff=0.9863;MQ=53.71;MQ0=6;MQRankSum=-9.269;QD=35.30;ReadPosRankSum=-2.199;VQSLOD=5.7214;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:60.29:0,60,951	1/1:4,2:6:12.04:175,12,0	0/0:38,0:25:43.72:0,44,461	0/0:36,0:22:25.41:0,25,443	1/1:7,26:32:25.68:912,26,0	0/0:24,0:24:69.21:0,69,851	0/0:25,0:25:35.16:0,35,652	1/1:10,27:36:78.19:1181,78,0	1/1:0,13:13:36.12:580,36,0	1/1:6,23:29:31.70:1042,32,0	1/1:7,15:23:35.88:529,36,0	0/0:24,0:24:69.20:0,69,839	0/0:29,0:29:75.22:0,75,922	1/1:1,10:11:33.11:518,33,0	1/1:0,9:9:27.09:444,27,0	1/1:1,14:15:45.15:740,45,0	1/1:1,11:12:30.10:495,30,0	0/0:11,0:11:18.01:0,18,205	1/1:4,5:9:15.04:227,15,0	1/1:12,30:42:52.77:1348,53,0	1/1:0,17:17:33:486,33,0	0/0:22,0:23:57:0,57,674	0/0:31,0:31:78.25:0,78,974	0/0:28,0:29:47.98:0,48,576	1/1:7,22:29:37.73:1103,38,0	1/1:6,18:24:25.76:925,26,0	1/1:1,19:20:22.68:901,23,0	1/1:2,3:5:12.04:186,12,0
chr10	78317159	.	TCTCACATATA	T	11981.90	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=14.857;DP=497;FS=18.049;HRun=0;HaplotypeScore=191.3773;InbreedingCoeff=0.9622;MQ=78.33;MQ0=0;MQRankSum=-13.778;QD=51.42;ReadPosRankSum=-1.228;VQSLOD=2.6300;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.25:0,78,3682	1/1:2,10:12:30.10:925,30,0	0/0:31,0:31:78.26:0,78,3432	0/0:27,0:27:57.66:0,58,2260	1/1:8,9:17:27.09:786,27,0	0/0:26,0:25:63.13:0,63,3121	0/0:16,0:16:42.14:0,42,2104	1/1:11,10:21:30:658,30,0	1/1:3,6:9:18.06:499,18,0	1/1:5,12:17:39.13:1193,39,0	1/1:4,11:15:33.11:954,33,0	0/0:28,0:28:78.27:0,78,3852	0/0:20,0:20:51.18:0,51,2413	1/1:5,7:12:27.08:674,27,0	1/1:3,6:9:18.06:567,18,0	1/1:5,9:14:27.09:821,27,0	1/1:6,2:8:12.04:290,12,0	0/0:16,0:16:42.14:0,42,2138	1/1:8,1:9:3.01:60,3,0	1/1:8,10:18:33.11:905,33,0	1/1:4,4:8:12.04:280,12,0	0/0:26,0:26:75.24:0,75,3175	0/0:26,0:26:69.21:0,69,3287	0/0:21,0:21:51.18:0,51,2506	1/1:10,11:21:33.11:1039,33,0	1/1:8,12:20:36.12:1109,36,0	1/1:9,7:16:27.06:712,27,0	1/1:2,5:7:18.06:512,18,0
chr10	78317222	.	TACACAC	T	472.41	PASS	AC=6;AF=0.231;AN=26;BaseQRankSum=0.120;DP=460;FS=5.229;HRun=0;HaplotypeScore=162.8821;InbreedingCoeff=0.7045;MQ=45.40;MQ0=30;MQRankSum=-4.979;QD=8.01;ReadPosRankSum=-3.665;VQSLOD=1.7139;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:33:53.14:0,53,1441	./.	./.	./.	./.	1/1:11,18:30:29.97:458,30,0	1/1:13,1:17:13.27:110,13,0	./.	./.	./.	./.	0/0:12,0:18:14.54:0,15,329	0/0:16,0:17:27.96:0,28,701	./.	1/1:12,0:12:2.74:12,3,0	0/0:12,0:12:3:0,3,25	./.	0/0:11,0:11:23.69:0,24,371	./.	./.	./.	0/0:12,0:22:20.83:0,21,317	0/0:25,0:27:14.32:0,14,312	0/0:30,0:32:28.69:0,29,1136	./.	./.	0/0:10,0:10:2.94:0,3,18	0/0:5,0:5:3:0,3,25
chr10	78317706	.	G	GTT	5875.10	PASS	AB=0.833;AC=33;AF=0.589;AN=56;BaseQRankSum=12.860;DP=394;FS=5.899;HRun=0;HaplotypeScore=113.7852;InbreedingCoeff=0.7296;MQ=72.43;MQ0=0;MQRankSum=-12.468;QD=23.69;ReadPosRankSum=0.849;VQSLOD=5.3947;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.14:0,51,766	1/1:1,6:7:16.91:278,17,0	0/0:12,0:12:18.11:0,18,415	0/1:14,0:14:10.77:11,0,325	1/1:10,16:26:41:653,41,0	0/0:16,0:16:48.16:0,48,778	0/0:15,0:15:45.15:0,45,721	0/1:16,0:20:52.88:103,0,53	1/1:0,6:6:18.06:271,18,0	1/1:8,13:22:34.65:592,35,0	1/1:5,14:21:46.67:654,47,0	0/0:19,0:19:54.17:0,54,851	0/0:15,0:15:45.15:0,45,733	1/1:3,2:5:2.67:85,3,0	1/1:1,6:7:16.33:269,16,0	1/1:3,4:8:13.77:192,14,0	1/1:0,6:6:18.06:273,18,0	0/0:7,0:7:18.02:0,18,264	1/1:10,0:16:19.40:170,19,0	1/1:4,1:22:53.89:486,54,0	0/1:4,1:8:8.35:60,0,8	0/0:12,0:12:33.10:0,33,509	0/0:17,0:17:51.17:0,51,827	0/0:16,0:16:48.16:0,48,783	1/1:2,19:23:65.68:940,66,0	1/1:2,12:15:36.34:547,36,0	1/1:9,0:18:26.92:247,27,0	1/1:2,1:3:1.85:45,2,0
chr10	78317737	.	C	CT	8571.63	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=1.134;DP=423;FS=4.134;HRun=5;HaplotypeScore=80.1839;InbreedingCoeff=0.8866;MQ=70.53;MQ0=0;MQRankSum=-9.082;QD=30.61;ReadPosRankSum=-2.364;VQSLOD=4.4378;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.12:0,48,516	1/1:0,4:4:12.04:158,12,0	0/0:12,0:12:29.70:0,30,321	0/1:7,0:8:33.80:34,0,166	1/1:3,11:14:30.10:394,30,0	0/0:16,0:16:45.11:0,45,483	0/0:14,0:14:33.08:0,33,355	1/1:0,33:33:93.30:1223,93,0	1/1:2,10:12:27.09:355,27,0	1/1:4,20:24:60.20:788,60,0	1/1:3,18:21:48.16:629,48,0	0/0:17,0:17:42.10:0,42,451	0/0:18,0:18:54.11:0,54,570	1/1:0,10:10:24.04:297,24,0	1/1:0,14:14:30.06:376,30,0	1/1:0,9:9:24.08:316,24,0	1/1:1,11:12:27.05:337,27,0	0/0:9,0:9:27.07:0,27,290	1/1:3,11:14:33.11:429,33,0	1/1:5,30:35:81.26:1065,81,0	1/1:0,8:8:11.95:119,12,0	0/0:5,0:5:15.04:0,15,161	0/0:22,0:22:60.15:0,60,644	0/0:14,0:14:39.10:0,39,419	1/1:3,23:26:66.21:868,66,0	1/1:2,18:20:51.17:671,51,0	1/1:1,14:15:38.77:474,39,0	1/1:0,1:1:3.01:39,3,0
chr10	78317863	.	A	AG	4901.20	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=5.200;DP=485;FS=1.326;HRun=1;HaplotypeScore=86.3704;InbreedingCoeff=0.9409;MQ=64.39;MQ0=2;MQRankSum=-2.320;QD=15.41;ReadPosRankSum=-0.245;VQSLOD=4.5922;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:50.02:0,50,538	1/1:7,0:7:16.68:107,17,0	0/0:17,0:9:19.94:0,20,226	0/0:11,0:10:1.07:0,1,95	1/1:21,0:21:58.50:360,58,0	0/0:13,0:13:29.86:0,30,337	0/0:13,0:13:28.07:0,28,310	1/1:33,0:33:63.94:487,64,0	1/1:20,0:20:57.24:357,57,0	1/1:14,0:14:38.02:263,38,0	1/1:13,0:13:21.01:182,21,0	0/0:18,0:18:42.71:0,43,422	0/0:12,0:12:26.28:0,26,240	1/1:16,0:16:43.92:258,44,0	1/1:14,0:14:39.93:241,40,0	1/1:19,0:19:55.17:363,55,0	1/1:22,0:22:63.73:390,64,0	0/0:12,0:12:9.80:0,10,82	1/1:18,2:20:6.15:294,6,0	1/1:24,0:24:25.31:186,25,0	1/1:21,3:24:51.70:391,52,0	0/0:17,0:17:50.99:0,51,510	0/0:13,0:13:26.98:0,27,281	0/0:16,0:16:45.09:0,45,516	1/1:18,0:17:45.66:264,46,0	1/1:18,0:18:40.58:257,41,0	1/1:20,2:22:39.24:368,39,0	1/1:13,0:13:21.65:133,22,0
chr10	78317864	.	GT	G	1594.73	PASS	AB=0.845;AC=27;AF=0.482;AN=56;BaseQRankSum=9.905;DP=490;FS=0.000;HRun=15;HaplotypeScore=94.3745;InbreedingCoeff=0.5839;MQ=63.15;MQ0=2;MQRankSum=-0.750;QD=5.39;ReadPosRankSum=3.187;VQSLOD=2.7558;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,1:24:35.02:0,35,386	1/1:0,6:7:19.77:121,20,0	0/0:18,0:9:1.74:0,2,40	0/0:9,1:9:6.83:0,7,30	1/1:10,10:21:29.41:192,29,0	0/0:12,0:13:32.72:0,33,261	0/0:11,0:12:26.82:0,27,219	0/1:34,1:35:2.87:3,0,217	1/1:6,0:20:26.40:76,26,0	1/1:4,10:14:29.46:192,29,0	1/1:7,7:14:6.57:118,7,0	0/1:11,5:18:38.37:38,0,168	0/0:11,1:12:7.43:0,7,155	0/1:6,10:16:6.59:138,0,7	1/1:4,10:14:29.51:192,30,0	1/1:5,0:19:28.47:82,28,0	1/1:3,1:22:39.59:125,40,0	0/0:3,0:13:23.04:0,23,135	0/1:21,0:21:9.74:10,0,125	0/0:19,2:21:3.02:0,3,209	0/1:20,4:24:37.42:37,0,214	0/0:16,1:17:10.73:0,11,215	0/0:14,0:14:26.98:0,27,231	0/0:17,0:17:41.96:0,42,360	1/1:2,1:18:29.41:95,29,0	1/1:7,11:19:23.87:218,24,0	0/0:21,1:22:21.91:0,22,235	1/1:3,9:14:10.36:160,10,0
chr10	78318094	.	A	AACACAC	1816.99	PASS	AB=0.896;AC=28;AF=0.560;AN=50;BaseQRankSum=-1.811;DP=506;FS=1.427;HRun=0;HaplotypeScore=149.0159;InbreedingCoeff=0.2521;MQ=66.12;MQ0=14;MQRankSum=-1.849;QD=5.42;ReadPosRankSum=-2.114;VQSLOD=2.3380;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:33:42.49:42,0,370	1/1:2,1:5:9.03:226,9,0	./.	./.	0/1:5,0:13:45.86:128,0,46	0/1:18,0:21:15.05:15,0,360	0/0:15,0:20:11.77:0,12,293	1/1:26,0:26:18.43:189,18,0	0/1:12,0:15:23.22:23,0,125	1/1:6,0:9:9.01:101,9,0	1/1:16,0:16:14.78:175,15,0	1/1:11,0:11:12.01:179,12,0	1/1:14,1:19:9.03:142,9,0	1/1:12,0:21:5.82:85,6,0	1/1:11,0:22:2.81:38,3,0	0/0:7,0:18:22.49:0,22,330	0/0:14,0:17:17.97:0,18,230	0/1:8,0:10:15.76:167,0,16	0/0:14,0:14:9.03:0,9,181	0/0:15,0:15:11.93:0,12,229	0/1:30,0:30:10.58:11,0,375	1/1:9,0:16:8.85:170,9,0	0/1:11,1:14:0.90:140,0,1	1/1:15,6:30:2.98:34,3,0	0/0:6,0:15:20.36:0,20,305	0/1:20,0:20:8.94:122,0,9	0/0:14,0:14:4.77:0,5,65	./.
chr10	78318690	.	C	CTC	1489.40	PASS	AB=0.957;AC=46;AF=0.821;AN=56;BaseQRankSum=4.659;DP=426;FS=33.892;HRun=0;HaplotypeScore=96.6674;InbreedingCoeff=0.2606;MQ=49.39;MQ0=8;MQRankSum=-2.687;QD=4.24;ReadPosRankSum=-2.074;VQSLOD=0.4426;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:59.73:0,60,517	1/1:10,0:9:11.93:90,12,0	0/0:22,0:7:5.88:0,6,46	0/0:17,0:8:5.97:0,6,44	1/1:18,0:17:9.20:62,9,0	1/1:10,0:10:14.20:97,14,0	1/1:7,0:7:5.99:50,6,0	1/1:16,0:16:15.79:118,16,0	1/1:17,0:16:4.98:24,5,0	0/1:15,0:15:49.27:121,0,49	1/1:11,0:11:5.20:29,5,0	1/1:14,0:14:14.02:105,14,0	1/1:11,0:11:3.93:25,4,0	0/1:18,0:15:1.86:2,0,19	1/1:20,0:19:17.43:169,17,0	1/1:18,0:18:5.94:44,6,0	1/1:13,0:12:7.55:56,8,0	1/1:7,0:6:3.88:26,4,0	1/1:22,0:19:19.58:140,20,0	1/1:21,0:20:2.84:35,3,0	1/1:8,0:7:3:25,3,0	1/1:7,0:6:2.99:24,3,0	1/1:7,0:6:2.98:22,3,0	1/1:8,0:7:5.99:48,6,0	1/1:23,0:22:5.88:36,6,0	0/1:19,0:19:8.86:103,0,9	0/1:19,4:22:34.21:98,0,34	1/1:7,0:7:10.25:90,10,0
chr10	78318704	.	C	CTGTGTGTG	1124.91	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=3.505;DP=416;FS=12.062;HRun=0;HaplotypeScore=122.0896;InbreedingCoeff=-0.1826;MQ=42.99;MQ0=12;MQRankSum=-2.195;QD=4.93;ReadPosRankSum=0.110;VQSLOD=1.6822;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:75.09:0,75,1531	0/0:10,0:9:12.03:0,12,156	0/0:18,0:7:12.03:0,12,145	0/0:16,0:4:12.04:0,12,237	0/0:23,0:22:5.51:0,6,72	0/1:9,0:9:99:101,0,190	0/0:7,0:7:6.02:0,6,101	0/1:21,0:21:99:108,0,339	0/0:20,0:19:7.39:0,7,43	0/1:13,0:13:75.21:75,0,431	0/0:11,3:14:2.91:0,3,23	0/0:10,0:10:14.95:0,15,155	0/0:9,0:9:6.39:0,6,56	0/1:20,0:18:8.60:80,0,9	0/1:19,0:18:99:131,0,284	0/1:18,0:18:25.68:57,0,26	0/1:13,0:11:22.30:50,0,22	0/0:5,0:4:8.93:0,9,67	0/1:20,0:16:72.04:72,0,385	1/1:18,0:17:3.01:66,3,0	0/0:7,0:6:8.97:0,9,94	0/0:6,0:5:3:0,3,25	0/0:6,0:5:3.01:0,3,45	0/1:7,0:6:60.89:61,0,65	1/1:21,0:21:14.83:108,15,0	0/1:18,0:18:99:276,0,311	0/1:24,0:22:32.45:32,0,373	0/1:7,0:6:53.80:63,0,54
chr10	78318706	.	C	CTCTGTGTGTG	4503.93	PASS	AB=0.846;AC=47;AF=0.839;AN=56;BaseQRankSum=5.035;DP=449;FS=8.412;HRun=0;HaplotypeScore=137.4901;InbreedingCoeff=0.3388;MQ=42.92;MQ0=13;MQRankSum=-1.962;QD=11.79;ReadPosRankSum=-1.806;VQSLOD=2.9876;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:80.34:0,80,1136	1/1:10,0:9:11.93:90,12,0	0/0:17,0:7:8.94:0,9,104	0/0:14,0:5:11.99:0,12,168	1/1:17,1:24:6.44:49,6,0	1/1:8,0:8:14.82:212,15,0	1/1:8,0:9:5.73:50,6,0	1/1:21,0:20:16.14:372,16,0	1/1:19,0:19:12.95:83,13,0	0/1:12,0:17:41.37:351,0,41	1/1:14,0:13:3.32:23,3,0	1/1:14,0:14:20.01:198,20,0	1/1:9,0:9:6.47:96,6,0	0/1:16,0:21:16.49:115,0,16	1/1:19,0:18:23.97:403,24,0	1/1:19,0:18:17.86:209,18,0	1/1:5,0:17:6.43:149,6,0	1/1:5,0:4:8.95:67,9,0	1/1:19,0:18:29.82:356,30,0	1/1:10,9:19:3.01:149,3,0	1/1:7,0:6:3:25,3,0	1/1:7,0:6:2.99:24,3,0	1/1:9,0:7:2.89:22,3,0	1/1:10,0:9:9.47:142,9,0	1/1:21,0:21:17.99:282,18,0	1/1:18,0:22:8.35:613,8,0	0/1:24,0:22:28.19:245,0,28	1/1:7,0:6:11.98:181,12,0
chr10	78318910	.	AT	A	7849.63	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=9.038;DP=490;FS=4.257;HRun=8;HaplotypeScore=50.1821;InbreedingCoeff=0.9964;MQ=77.61;MQ0=0;MQRankSum=-1.649;QD=25.57;ReadPosRankSum=0.639;VQSLOD=5.5777;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1177	1/1:0,8:8:24.04:232,24,0	0/0:14,0:14:30.56:0,31,359	0/0:16,0:16:36.06:0,36,397	1/1:1,22:23:66.10:637,66,0	0/0:17,0:17:51.16:0,51,616	0/0:15,0:15:42.11:0,42,486	1/1:6,26:32:75.09:712,75,0	1/1:0,18:18:51.08:492,51,0	1/1:1,15:16:45.07:435,45,0	1/1:0,22:22:63.10:608,63,0	0/0:10,0:10:27.07:0,27,316	0/0:16,0:16:48.12:0,48,561	1/1:2,17:19:48.08:463,48,0	1/1:0,17:17:51.08:492,51,0	1/1:1,17:18:45.07:435,45,0	1/1:1,16:16:45.07:435,45,0	0/0:13,0:13:36.11:0,36,435	1/1:0,7:7:21.03:203,21,0	1/1:1,28:29:78.07:744,78,0	1/1:2,11:13:33.05:319,33,0	0/0:14,0:14:39.12:0,39,471	0/0:17,0:17:42.13:0,42,507	0/0:17,0:17:45.10:0,45,527	1/1:1,16:17:45.07:435,45,0	1/1:3,18:21:17.84:456,18,0	1/1:1,23:23:60.10:579,60,0	1/1:0,6:6:18.03:174,18,0
chr10	78320109	.	A	AT	738.04	PASS	AB=0.982;AC=30;AF=0.536;AN=56;BaseQRankSum=9.478;DP=621;FS=6.741;HRun=10;HaplotypeScore=133.1956;InbreedingCoeff=0.4589;MQ=75.08;MQ0=0;MQRankSum=-0.993;QD=1.97;ReadPosRankSum=-2.285;VQSLOD=-0.2280;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,1:50:99:0,107,1058	1/1:5,0:5:4.43:11,4,0	0/1:11,0:13:3.11:3,0,92	0/0:11,0:11:11.57:0,12,88	1/1:21,0:21:8.57:53,9,0	0/0:21,1:22:24.95:0,25,411	0/0:26,0:26:65.91:0,66,542	1/1:29,0:29:2.27:117,2,0	0/0:29,0:29:36.48:0,36,286	1/1:34,0:33:24.63:114,25,0	1/1:17,0:17:3.22:40,3,0	0/1:21,0:21:33.58:34,0,109	0/1:18,1:19:10.13:10,0,75	1/1:19,0:19:10.46:26,10,0	1/1:21,0:21:9.66:73,10,0	0/1:16,1:17:26.57:27,0,98	0/0:30,0:30:42.87:0,43,333	0/1:19,0:19:8.69:9,0,16	1/1:32,0:32:28.21:160,28,0	1/1:30,0:30:6.59:52,7,0	0/1:18,0:18:3.25:10,0,3	0/0:22,1:23:6.56:0,7,129	0/0:14,0:14:3.46:0,3,105	0/0:21,0:21:38.21:0,38,203	0/0:19,1:20:8.03:0,8,147	1/1:37,0:37:17.38:154,17,0	1/1:15,0:15:8.86:22,9,0	1/1:8,0:8:4.79:12,5,0
chr10	78320119	.	TG	T	10157.03	PASS	AB=0.974;AC=37;AF=0.661;AN=56;BaseQRankSum=-0.001;DP=586;FS=5.025;HRun=1;HaplotypeScore=97.0386;InbreedingCoeff=0.5390;MQ=78.26;MQ0=0;MQRankSum=-1.996;QD=23.68;ReadPosRankSum=-4.681;VQSLOD=3.3440;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,146,1870	1/1:0,7:7:18.01:227,18,0	0/0:16,0:17:33.48:0,33,342	0/0:10,0:11:24.03:0,24,214	1/1:2,17:19:56.74:634,57,0	0/0:24,0:24:69.09:0,69,847	0/0:25,0:25:75.19:0,75,954	1/1:16,15:31:75.59:886,76,0	0/1:26,0:26:0:0,0,41	1/1:0,33:33:97.50:1215,98,0	1/1:3,11:14:37.54:507,38,0	1/1:24,0:24:9.78:182,10,0	0/1:13,1:14:3.21:69,0,3	1/1:0,15:15:33.11:459,33,0	1/1:4,19:23:63.98:859,64,0	0/1:13,1:14:6.74:104,0,7	0/0:28,0:28:3.56:0,4,62	1/1:5,13:18:36.05:574,36,0	1/1:0,23:23:69.18:876,69,0	1/1:9,20:29:81.88:1057,82,0	1/1:1,14:15:27.88:412,28,0	0/1:21,0:21:10.69:70,0,11	0/1:16,0:16:6.13:81,0,6	0/1:20,1:21:13.58:127,0,14	0/1:15,0:15:2.39:2,0,18	1/1:6,26:32:94.10:1192,94,0	1/1:0,13:13:30.10:416,30,0	1/1:1,5:6:15.05:208,15,0
chr10	78320654	.	A	AATCT	5327.43	PASS	AC=18;AF=0.360;AN=50;BaseQRankSum=-2.984;DP=604;FS=6.425;HRun=0;HaplotypeScore=134.6742;InbreedingCoeff=0.9452;MQ=59.84;MQ0=5;MQRankSum=-0.215;QD=28.04;ReadPosRankSum=-0.849;VQSLOD=4.3108;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:10.98:0,11,320	0/0:9,0:9:12.04:0,12,182	./.	./.	0/0:22,0:22:27:0,27,351	1/1:12,0:22:18.06:297,18,0	1/1:9,0:9:3.01:38,3,0	./.	0/0:24,0:24:32.12:0,32,494	0/0:29,0:27:45.15:0,45,670	0/0:9,0:9:8.94:0,9,86	1/1:15,6:22:36.12:815,36,0	1/1:18,7:25:39.13:901,39,0	0/0:24,0:24:36.12:0,36,537	0/0:30,0:30:41.71:0,42,599	0/0:22,0:22:39.09:0,39,569	0/0:17,0:17:29.97:0,30,381	0/0:19,0:18:33.11:0,33,495	0/0:20,0:20:24.04:0,24,340	0/0:17,0:17:24.08:0,24,367	0/0:21,0:21:27.04:0,27,367	1/1:13,1:25:30.02:475,30,0	1/1:13,7:18:24.08:539,24,0	1/1:7,4:11:18.06:417,18,0	0/0:25,0:25:33.07:0,33,477	1/1:25,8:33:42.14:914,42,0	0/0:31,0:31:45.11:0,45,660	1/1:12,10:22:42.14:932,42,0
chr10	78320748	.	TTATCTATCTATCTATC	T	794.09	PASS	AB=0.655;AC=9;AF=0.173;AN=52;BaseQRankSum=5.043;DP=545;FS=5.408;HRun=0;HaplotypeScore=206.1235;InbreedingCoeff=-0.2288;MQ=43.46;MQ0=40;MQRankSum=-1.934;QD=3.97;ReadPosRankSum=0.340;VQSLOD=2.2604;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:26:51.14:0,51,2220	0/0:5,0:5:9.03:0,9,418	./.	./.	0/0:19,0:16:24.08:0,24,906	0/0:13,0:26:39.13:0,39,1938	0/0:8,0:8:15.05:0,15,485	0/0:18,0:20:20:0,20,213	0/0:21,0:17:36.12:0,36,1992	0/0:25,0:21:51.18:0,51,2555	0/0:9,0:6:12.04:0,12,387	0/1:8,13:20:99:145,0,426	0/1:15,15:27:99:318,0,387	0/0:21,0:19:39.13:0,39,2015	0/0:29,0:26:66.23:0,66,2856	0/0:20,0:20:42.08:0,42,1873	0/0:17,0:27:56.22:0,56,1811	0/0:10,0:11:12.93:0,13,508	0/0:10,0:8:5.60:0,6,44	0/1:3,0:9:16.87:17,0,45	0/0:9,0:8:5.38:0,5,38	0/1:11,16:24:99:150,0,133	0/1:6,7:12:65.34:65,0,199	0/1:7,7:14:76.66:77,0,94	0/0:16,0:14:39.13:0,39,1714	0/1:20,0:34:34.83:35,0,1413	0/1:13,0:21:84.56:85,0,122	0/1:9,0:21:38.66:39,0,747
chr10	78320772	.	CT	C	156.22	PASS	AB=0.912;AC=7;AF=0.135;AN=52;BaseQRankSum=4.599;DP=482;FS=4.542;HRun=1;HaplotypeScore=94.3947;InbreedingCoeff=0.2234;MQ=43.09;MQ0=39;MQRankSum=-2.561;QD=3.12;ReadPosRankSum=-1.622;VQSLOD=-0.5384;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:25:48.16:0,48,761	0/0:6,0:6:9.03:0,9,144	./.	./.	0/0:10,3:12:24.08:0,24,379	0/0:31,0:28:54.13:0,54,680	0/0:14,0:9:14.97:0,15,201	0/0:20,0:14:42.14:0,42,611	0/0:22,0:19:36.12:0,36,575	0/0:27,0:20:60.20:0,60,938	0/0:8,0:6:12.04:0,12,192	0/0:19,0:18:24.05:0,24,329	0/0:23,0:21:14.88:0,15,312	0/0:17,0:14:39.13:0,39,621	0/0:27,0:26:66.23:0,66,1050	0/0:21,0:20:42.14:0,42,669	0/0:29,2:26:15.05:0,15,561	0/1:10,0:10:18.76:19,0,190	0/1:7,1:7:20.56:21,0,231	0/1:9,2:8:24.64:75,0,25	1/1:4,2:5:2.40:41,2,0	0/0:23,0:20:21.96:0,22,309	0/0:10,0:10:12.04:0,12,177	0/0:13,0:13:11.97:0,12,163	0/0:17,0:13:39.13:0,39,617	0/0:32,1:26:2.23:0,2,378	1/1:12,3:14:1.44:119,1,0	0/0:15,0:15:2.43:0,2,46
chr10	78320785	.	TATTG	T	153.74	PASS	AB=0.986;AC=8;AF=0.154;AN=52;BaseQRankSum=2.439;DP=463;FS=9.860;HRun=0;HaplotypeScore=105.9498;InbreedingCoeff=-0.0420;MQ=42.03;MQ0=43;MQRankSum=-1.186;QD=1.33;ReadPosRankSum=-2.056;VQSLOD=1.1769;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:20:51.17:0,51,1173	0/0:9,0:9:24.08:0,24,417	./.	./.	0/0:7,0:7:15.01:0,15,303	0/0:29,0:28:57.19:0,57,1101	0/1:14,0:9:10.30:10,0,86	0/0:28,0:18:47.80:0,48,765	0/0:19,0:18:39.09:0,39,945	0/0:25,1:18:32.40:0,32,1181	0/0:10,0:8:15.05:0,15,363	0/1:18,0:17:38.96:39,0,62	0/1:22,1:21:50.46:148,0,50	0/0:13,0:12:36.08:0,36,863	0/0:25,0:24:60.16:0,60,1536	0/0:18,0:17:45.03:0,45,900	0/0:27,0:23:42.08:0,42,689	0/0:9,0:9:14.89:0,15,141	0/0:9,0:6:18.06:0,18,315	0/0:10,0:7:8.70:0,9,94	0/0:6,0:5:6.74:0,7,55	0/1:22,1:19:20.65:21,0,288	0/1:9,0:9:16.30:16,0,84	1/1:11,3:14:0.86:2,1,0	0/0:14,0:10:24.08:0,24,647	0/0:29,0:23:30.47:0,30,581	0/1:15,0:14:37.93:38,0,103	0/0:16,0:16:9.89:0,10,162
chr10	78320831	.	T	TC	513.58	PASS	AB=0.830;AC=9;AF=0.173;AN=52;BaseQRankSum=0.892;DP=395;FS=0.991;HRun=0;HaplotypeScore=100.1247;InbreedingCoeff=0.3687;MQ=36.79;MQ0=45;MQRankSum=-1.436;QD=7.23;ReadPosRankSum=-1.500;VQSLOD=3.3836;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:26:42.01:0,42,521	0/0:12,0:12:32.04:0,32,313	./.	./.	0/1:7,0:6:0:0,0,0	0/0:23,0:22:51.17:0,51,712	0/0:13,0:8:9.03:0,9,126	0/0:22,0:9:20.10:0,20,258	0/0:16,0:15:20.50:0,20,208	0/0:28,0:18:48.98:0,49,454	0/0:11,0:9:9.03:0,9,126	0/1:10,3:13:1.14:147,0,1	1/1:10,6:15:4.89:225,5,0	0/0:13,0:12:30.05:0,30,337	0/0:21,0:20:42.04:0,42,492	0/0:15,0:14:30.02:0,30,333	0/0:15,1:12:9.35:0,9,172	0/1:9,4:11:99:129,0,178	0/0:8,0:7:20.09:0,20,231	0/0:9,0:6:5.98:0,6,54	0/1:2,0:2:18.89:19,0,36	0/0:6,1:7:8.93:0,9,70	0/1:5,1:6:10.31:29,0,10	1/1:7,2:10:6.02:94,6,0	0/0:11,0:7:8.99:0,9,96	0/0:25,0:19:47.74:0,48,524	0/0:15,0:14:27.07:0,27,298	0/0:10,0:10:18.02:0,18,195
chr10	78320855	.	CTATCATCT	C	8768.23	PASS	AB=0.833;AC=32;AF=0.593;AN=54;BaseQRankSum=0.528;DP=309;FS=22.004;HRun=0;HaplotypeScore=100.0133;InbreedingCoeff=0.7421;MQ=37.19;MQ0=21;MQRankSum=-4.050;QD=49.82;ReadPosRankSum=0.908;VQSLOD=2.6124;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:26:63.15:0,63,2224	1/1:1,11:12:30.10:862,30,0	./.	0/0:6,0:2:6.02:0,6,130	1/1:0,9:9:3.48:41,3,0	0/0:25,0:24:63.22:0,63,2381	0/0:9,0:8:15.05:0,15,533	1/1:2,7:7:18.05:319,18,0	1/1:5,10:14:17.35:467,17,0	1/1:2,14:14:42.14:973,42,0	1/1:0,6:6:9.03:188,9,0	0/0:11,0:11:18.06:0,18,449	0/0:12,0:12:27.09:0,27,654	1/1:2,9:10:24.08:702,24,0	1/1:3,9:11:15.05:436,15,0	1/1:3,9:11:27.09:720,27,0	1/1:6,5:10:14.08:494,14,0	0/0:14,0:13:30:0,30,514	0/1:4,4:7:19.23:349,0,19	1/1:3,3:4:12.04:288,12,0	0/1:5,0:5:30.83:49,0,31	0/0:5,0:4:6.02:0,6,137	0/0:4,0:4:6.02:0,6,90	0/0:10,0:9:11.93:0,12,395	1/1:1,7:7:12.04:308,12,0	1/1:7,10:14:39.13:1069,39,0	1/1:1,11:12:36.12:1019,36,0	1/1:1,5:6:18.06:486,18,0
chr10	78320859	.	CATCT	C	4551.32	PASS	AB=0.625;AC=33;AF=0.611;AN=54;BaseQRankSum=4.196;DP=292;FS=22.498;HRun=0;HaplotypeScore=99.8528;InbreedingCoeff=0.8286;MQ=41.33;MQ0=10;MQRankSum=-6.078;QD=27.75;ReadPosRankSum=1.569;VQSLOD=3.1176;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:63.04:0,63,1364	1/1:11,1:12:30.01:372,30,0	./.	0/0:7,0:3:5.65:0,6,129	1/1:9,0:9:2.97:20,3,0	0/0:23,0:23:63.14:0,63,1381	0/0:7,0:7:15.05:0,15,360	1/1:9,0:7:18.05:270,18,0	1/1:11,3:14:18.02:253,18,0	1/1:14,0:14:27.08:386,27,0	1/1:6,0:6:8.99:128,9,0	0/0:6,0:10:18.06:0,18,430	0/0:10,0:12:27.09:0,27,624	1/1:9,1:10:24.04:311,24,0	1/1:9,3:11:15.05:220,15,0	1/1:9,2:11:27:356,27,0	1/1:9,0:10:10.87:268,11,0	0/0:12,0:13:19.88:0,20,304	1/1:8,0:7:12.01:166,12,0	1/1:4,0:4:12:170,12,0	0/1:2,3:5:6.47:49,0,6	0/0:5,0:6:12.04:0,12,266	0/0:1,0:4:5.77:0,6,65	0/0:9,0:8:12.04:0,12,313	1/1:7,0:7:12:170,12,0	1/1:11,3:14:39.13:580,39,0	1/1:13,0:13:39.13:591,39,0	1/1:5,1:6:18.03:241,18,0
chr10	78320915	.	T	TTATC	7483.42	PASS	AB=0.875;AC=35;AF=0.648;AN=54;BaseQRankSum=-2.193;DP=362;FS=25.707;HRun=0;HaplotypeScore=84.9429;InbreedingCoeff=0.8402;MQ=45.65;MQ0=2;MQRankSum=-0.896;QD=40.23;ReadPosRankSum=1.410;VQSLOD=3.0489;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:42.14:0,42,709	1/1:3,1:4:6.02:146,6,0	0/0:16,0:6:15.05:0,15,243	./.	1/1:6,7:12:18.06:433,18,0	0/0:23,0:23:51.17:0,51,825	0/0:10,0:10:21.07:0,21,354	0/0:50,0:48:99:0,102,1642	1/1:7,7:14:21.07:522,21,0	1/1:8,10:16:30.10:710,30,0	1/1:3,5:8:12.04:290,12,0	1/1:2,7:9:24.08:596,24,0	1/1:2,7:9:21.07:521,21,0	1/1:4,4:8:15.05:388,15,0	1/1:4,8:12:27.09:662,27,0	1/1:4,7:11:24.08:595,24,0	0/1:6,1:7:29.20:66,0,29	1/1:6,0:6:0.89:2,1,0	0/0:6,0:6:15.05:0,15,255	0/0:18,0:18:45.11:0,45,710	0/0:15,0:15:24.04:0,24,374	1/1:10,5:13:24.07:482,24,0	1/1:2,7:8:12.04:293,12,0	1/1:5,10:15:27.09:636,27,0	1/1:5,4:9:18.04:396,18,0	1/1:8,8:15:24.08:596,24,0	0/0:14,0:14:36.12:0,36,588	1/1:0,2:2:6.02:149,6,0
chr10	78320931	.	CATCTATT	C	1511.45	PASS	AB=0.955;AC=19;AF=0.339;AN=56;BaseQRankSum=1.002;DP=347;FS=1.560;HRun=0;HaplotypeScore=119.5848;InbreedingCoeff=-0.4077;MQ=47.81;MQ0=7;MQRankSum=-3.891;QD=8.94;ReadPosRankSum=-3.404;VQSLOD=1.5253;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.19:0,54,1781	0/0:4,1:5:12:0,12,213	0/0:17,0:7:18.06:0,18,468	0/1:5,0:3:8.15:8,0,16	0/1:10,1:10:70.79:71,0,210	0/0:26,0:26:78.18:0,78,2413	0/0:11,0:11:33:0,33,1015	0/0:43,0:42:99:0,123,3127	0/1:10,1:11:99:190,0,188	0/1:14,1:14:99:128,0,520	0/1:9,0:9:47.38:47,0,250	0/1:8,0:8:99:158,0,316	0/1:9,0:9:99:182,0,252	0/1:6,1:7:36.48:36,0,210	0/1:11,1:12:99:130,0,525	0/1:9,2:11:97.21:97,0,375	0/1:8,0:8:30.03:30,0,170	1/1:2,0:5:0.89:2,1,0	0/0:7,0:6:18.03:0,18,522	0/0:17,0:17:51.09:0,51,1503	0/0:17,0:18:38.79:0,39,1000	0/1:13,0:12:99:149,0,439	0/1:8,0:6:92.15:92,0,130	0/1:14,0:14:99:114,0,686	0/1:7,1:8:49.58:50,0,529	0/1:12,1:13:99:138,0,591	0/0:13,0:13:39.13:0,39,1501	0/1:2,0:2:26.16:47,0,26
chr10	78320966	.	A	AATCT	8463.69	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-2.236;DP=315;FS=38.481;HRun=0;HaplotypeScore=89.5985;InbreedingCoeff=0.9170;MQ=56.79;MQ0=3;MQRankSum=-5.282;QD=48.09;ReadPosRankSum=0.320;VQSLOD=3.3078;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:34.65:0,35,553	1/1:1,4:5:12.04:302,12,0	0/0:8,0:6:9.03:0,9,159	0/0:13,0:9:5.78:0,6,122	1/1:5,9:14:27.09:590,27,0	0/0:23,0:23:63.22:0,63,1104	0/0:10,0:10:27.09:0,27,441	1/1:15,0:14:27.97:488,28,0	1/1:1,6:7:18.06:425,18,0	1/1:2,9:11:27.09:693,27,0	1/1:6,4:9:18.06:406,18,0	0/0:8,0:8:18.03:0,18,282	0/0:12,0:12:30.10:0,30,529	1/1:3,4:7:12.04:272,12,0	1/1:3,8:11:24.08:570,24,0	1/1:5,6:11:21.07:488,21,0	1/1:1,5:7:15.05:366,15,0	1/1:2,0:4:2.02:11,2,0	1/1:2,5:7:15.05:382,15,0	1/1:4,7:11:21.07:491,21,0	1/1:3,15:18:29.97:730,30,0	0/0:19,0:19:47.89:0,48,632	0/0:7,0:7:18.02:0,18,275	0/0:19,0:18:39.02:0,39,689	1/1:4,10:14:36.12:862,36,0	1/1:2,9:11:27.09:692,27,0	1/1:3,6:9:21.07:504,21,0	1/1:2,2:4:9.03:193,9,0
chr10	78321026	.	TCA	T	1434.92	PASS	AB=0.808;AC=28;AF=0.560;AN=50;BaseQRankSum=6.089;DP=250;FS=0.000;HRun=0;HaplotypeScore=70.4315;InbreedingCoeff=0.5858;MQ=52.85;MQ0=1;MQRankSum=-4.549;QD=12.48;ReadPosRankSum=-2.804;VQSLOD=2.8202;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,1:20:42.13:0,42,654	./.	0/0:25,0:13:24.07:0,24,346	0/0:12,0:6:8.78:0,9,107	1/1:6,1:7:3.01:37,3,0	0/0:18,0:18:45.14:0,45,702	0/0:14,0:14:36.12:0,36,579	0/1:17,12:29:6.47:474,0,6	1/1:3,1:4:6:60,6,0	1/1:5,1:6:9.01:91,9,0	1/1:3,4:6:9.03:110,9,0	0/0:4,0:4:6.02:0,6,97	0/0:8,0:8:12.04:0,12,194	./.	1/1:3,1:4:2.99:37,3,0	1/1:1,2:3:6.02:73,6,0	1/1:3,5:8:14.80:167,15,0	0/0:9,0:9:2.99:0,3,26	./.	1/1:1,1:2:3.01:37,3,0	1/1:4,4:8:8.82:110,9,0	0/0:13,0:13:30.07:0,30,457	0/0:6,0:6:9.03:0,9,144	0/1:9,1:9:21.57:22,0,179	1/1:5,8:13:15.64:177,16,0	1/1:3,1:4:3.01:37,3,0	1/1:3,1:4:3.01:37,3,0	1/1:1,5:6:12.04:147,12,0
chr10	78321045	.	TGA	T	310.06	PASS	AB=0.989;AC=6;AF=0.120;AN=50;BaseQRankSum=4.026;DP=174;FS=14.888;HRun=0;HaplotypeScore=55.9999;InbreedingCoeff=0.0192;MQ=55.45;MQ0=0;MQRankSum=-4.262;QD=5.74;ReadPosRankSum=-3.495;VQSLOD=-0.1815;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:54.13:0,54,1060	./.	0/0:12,0:8:17.76:0,18,235	0/0:9,0:5:6.28:0,6,98	0/0:1,0:1:2.94:0,3,18	0/0:17,0:17:2.87:0,3,751	0/0:15,0:15:45.14:0,45,838	0/1:20,1:21:13.23:13,0,553	0/0:1,0:1:2.97:0,3,20	0/0:1,0:1:3:0,3,27	0/0:4,0:3:8.73:0,9,49	0/0:3,0:3:6.01:0,6,63	0/0:5,0:5:12.02:0,12,174	./.	0/0:1,0:1:2.92:0,3,17	0/0:2,0:2:5.88:0,6,36	0/1:8,0:8:29.12:29,0,41	1/1:3,6:9:18.06:274,18,0	./.	0/0:1,0:1:2.96:0,3,19	0/0:5,0:5:8.89:0,9,76	0/0:11,0:11:30.10:0,30,427	0/0:3,0:3:9.03:0,9,139	0/0:5,0:5:11.96:0,12,166	0/1:10,0:10:47.67:65,0,48	0/0:1,0:1:3.01:0,3,45	0/0:1,0:1:2.94:0,3,18	0/1:6,0:6:37.66:48,0,38
chr10	78321061	.	TA	T	728.65	PASS	AB=0.896;AC=20;AF=0.476;AN=42;BaseQRankSum=2.653;DP=173;FS=5.169;HRun=1;HaplotypeScore=47.0209;InbreedingCoeff=0.5482;MQ=56.90;MQ0=7;MQRankSum=-0.457;QD=9.46;ReadPosRankSum=-0.809;VQSLOD=0.7546;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.24:0,78,1133	./.	./.	0/0:4,0:3:3.24:0,3,50	./.	0/0:16,0:16:45.13:0,45,671	0/0:12,0:12:36.12:0,36,552	0/1:27,2:25:99:159,0,112	1/1:2,1:2:3.41:19,3,0	1/1:0,5:5:15.05:197,15,0	./.	0/0:4,0:4:9.02:0,9,110	0/0:4,0:4:9.02:0,9,107	1/1:0,2:2:5.97:59,6,0	1/1:1,2:3:6.02:79,6,0	1/1:4,0:4:5.94:43,6,0	0/1:10,2:10:1.10:49,0,1	0/0:9,0:9:21.02:0,21,202	1/1:1,3:4:9.39:96,9,0	./.	1/1:0,1:1:3.01:39,3,0	0/0:1,0:1:3.01:0,3,37	0/0:6,0:6:18.06:0,18,220	0/0:3,0:3:6.02:0,6,73	1/1:9,0:9:3.64:110,4,0	./.	./.	1/1:5,0:5:2.30:30,2,0
chr10	78321062	.	A	AT	1622.58	PASS	AC=22;AF=0.524;AN=42;BaseQRankSum=2.438;DP=183;FS=3.394;HRun=2;HaplotypeScore=44.9358;InbreedingCoeff=0.7630;MQ=57.50;MQ0=7;MQRankSum=-3.079;QD=20.03;ReadPosRankSum=-1.462;VQSLOD=3.2390;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:74.92:0,75,892	./.	./.	0/0:4,0:3:4.44:0,4,47	./.	0/0:16,0:16:44.77:0,45,507	0/0:12,0:12:36.11:0,36,445	1/1:13,17:26:44.77:614,45,0	1/1:2,1:2:4.83:48,5,0	1/1:5,0:5:15.05:197,15,0	./.	0/0:4,0:4:9.03:0,9,110	0/0:4,0:4:8.99:0,9,85	1/1:2,0:2:6.02:83,6,0	1/1:3,0:3:6.02:79,6,0	1/1:1,1:2:6.01:68,6,0	1/1:2,1:13:23.59:218,24,0	0/0:9,0:9:20.93:0,21,203	1/1:5,0:5:8.78:122,9,0	./.	1/1:1,0:1:3.01:39,3,0	0/0:1,0:1:3.01:0,3,37	0/0:7,0:7:18.06:0,18,221	0/0:3,0:3:6.02:0,6,74	1/1:3,2:10:13.12:217,13,0	./.	./.	1/1:2,0:5:11.84:106,12,0
chr10	78321063	.	TTCTTCA	T	396.38	PASS	AB=0.922;AC=7;AF=0.130;AN=54;BaseQRankSum=4.088;DP=181;FS=7.224;HRun=0;HaplotypeScore=56.8896;InbreedingCoeff=-0.2178;MQ=59.55;MQ0=7;MQRankSum=-3.659;QD=5.51;ReadPosRankSum=-0.715;VQSLOD=0.1175;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.09:0,81,2861	0/0:1,0:1:3.01:0,3,96	./.	0/1:4,0:4:9.10:9,0,202	0/0:6,0:6:18.06:0,18,545	0/0:16,0:16:45.15:0,45,1599	0/0:12,0:12:36.12:0,36,1286	0/1:22,4:23:99:233,0,1309	0/1:2,1:2:49.87:50,0,77	0/0:5,0:5:15.05:0,15,415	0/0:1,0:1:3.01:0,3,96	0/0:3,0:3:9.03:0,9,338	0/0:4,0:4:8.87:0,9,333	0/0:2,0:2:6.02:0,6,165	0/0:3,0:3:9.03:0,9,261	0/0:2,0:2:6.02:0,6,179	0/1:15,0:13:48.71:49,0,450	0/1:9,0:9:0.33:0,0,700	0/0:5,0:5:12.04:0,12,362	0/0:1,0:1:3.01:0,3,93	0/0:1,0:1:3.01:0,3,82	0/0:1,0:1:3.01:0,3,112	0/0:7,0:7:21.07:0,21,788	0/0:3,0:3:6.02:0,6,225	0/1:8,2:10:99:129,0,473	0/0:2,0:2:6.02:0,6,198	0/0:3,0:3:3.01:0,3,77	0/1:3,0:4:42.22:42,0,198
chr10	78322158	.	AT	A	19964.82	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=8.935;DP=633;FS=2.117;HRun=2;HaplotypeScore=63.1252;InbreedingCoeff=0.9891;MQ=71.86;MQ0=0;MQRankSum=-1.487;QD=36.04;ReadPosRankSum=1.142;VQSLOD=5.3985;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1462	1/1:1,14:15:42.14:545,42,0	0/0:9,0:9:14.26:0,14,138	0/0:7,0:7:13.30:0,13,111	1/1:0,32:32:87.28:1130,87,0	0/0:17,0:17:51.17:0,51,763	0/0:13,0:13:36.12:0,36,536	1/1:0,26:26:75.24:974,75,0	1/1:1,26:27:75.24:973,75,0	1/1:2,29:31:87.28:1129,87,0	1/1:0,24:24:69.22:896,69,0	1/1:0,28:28:72.23:935,72,0	1/1:0,23:23:66.21:855,66,0	1/1:0,27:27:81.26:1052,81,0	1/1:0,23:23:57.19:740,57,0	1/1:0,22:22:63.20:818,63,0	1/1:0,34:34:90.29:1169,90,0	1/1:0,23:23:69.22:896,69,0	1/1:0,15:15:45.13:568,45,0	1/1:0,38:38:90.29:1168,90,0	1/1:0,30:30:90.29:1169,90,0	1/1:0,21:21:60.20:779,60,0	1/1:0,18:18:48.16:623,48,0	1/1:0,28:28:78.25:1013,78,0	1/1:0,22:22:57.19:740,57,0	1/1:1,26:27:78.25:1013,78,0	1/1:0,13:13:39.13:506,39,0	1/1:0,7:7:21.07:273,21,0
chr10	78325500	.	AATGTGTGT	A	824.42	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=7.510;DP=615;FS=0.000;HRun=0;HaplotypeScore=165.4959;InbreedingCoeff=0.4786;MQ=70.63;MQ0=9;MQRankSum=-0.322;QD=9.26;ReadPosRankSum=0.407;VQSLOD=2.2735;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:44.49:0,44,759	0/0:11,0:11:24.05:0,24,616	0/0:33,0:17:35.08:0,35,352	0/0:36,0:26:32.79:0,33,421	0/0:29,0:29:74.90:0,75,1490	0/0:14,0:14:39.02:0,39,722	0/0:23,0:23:57.03:0,57,1056	0/0:38,0:37:73:0,73,746	0/1:22,0:22:6.42:6,0,311	0/0:18,0:18:51.08:0,51,827	0/0:12,0:12:27.49:0,27,485	0/0:21,0:21:54.33:0,54,466	0/0:24,0:24:58.72:0,59,544	0/0:22,0:22:41.61:0,42,495	0/0:21,0:21:50.99:0,51,790	0/1:23,0:23:99:237,0,202	0/0:23,0:23:30.08:0,30,241	0/1:18,0:16:66.97:67,0,201	0/0:15,0:15:39.05:0,39,412	0/0:23,0:23:50.93:0,51,461	0/0:37,0:35:71.81:0,72,608	0/0:28,0:26:59.89:0,60,571	0/0:18,0:18:38.90:0,39,338	0/0:18,0:17:38.94:0,39,374	0/0:12,1:12:14.54:0,15,157	1/1:4,20:24:59.86:599,60,0	0/0:24,0:24:53.95:0,54,558	1/1:2,0:2:5.99:48,6,0
chr10	78325509	.	ATGTG	A	1322.37	PASS	AB=0.916;AC=26;AF=0.520;AN=50;BaseQRankSum=4.967;DP=676;FS=2.396;HRun=0;HaplotypeScore=128.6712;InbreedingCoeff=0.3498;MQ=59.26;MQ0=17;MQRankSum=-0.486;QD=3.42;ReadPosRankSum=1.616;VQSLOD=2.4980;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:27:15.03:0,15,304	0/0:10,0:10:15.05:0,15,278	./.	./.	0/0:34,0:35:41.83:0,42,665	0/1:18,1:19:25.68:26,0,231	0/0:22,0:23:20.81:0,21,406	0/0:38,0:37:11.89:0,12,95	1/1:16,0:25:2.82:28,3,0	0/0:27,0:27:32.43:0,32,394	0/0:12,0:14:6.91:0,7,107	1/1:26,0:26:4.59:48,5,0	1/1:23,3:25:5.85:93,6,0	0/0:16,0:25:8.81:0,9,135	0/0:20,0:27:14.80:0,15,246	1/1:11,0:20:15.97:107,16,0	0/1:25,0:27:12.09:78,0,12	1/1:14,0:17:9.13:84,9,0	1/1:14,1:14:5.05:53,5,0	0/1:21,3:24:7.93:163,0,8	0/1:41,0:39:11.29:11,0,57	1/1:21,10:29:12.04:186,12,0	0/1:17,5:23:11.75:127,0,12	1/1:20,2:20:2.21:236,2,0	1/1:10,0:12:2.92:18,3,0	0/1:29,0:28:52.18:52,0,68	1/1:16,8:24:11.80:186,12,0	./.
chr10	78329733	.	G	GGGGAA	2365.47	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=-2.792;DP=386;FS=7.607;HRun=0;HaplotypeScore=83.8455;InbreedingCoeff=0.8273;MQ=78.82;MQ0=2;MQRankSum=-3.474;QD=24.14;ReadPosRankSum=1.191;VQSLOD=2.3514;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:42.14:0,42,754	0/0:2,0:2:3.01:0,3,57	0/1:31,0:19:40.08:40,0,185	0/0:39,0:26:27.04:0,27,331	0/0:9,0:9:18.05:0,18,309	0/0:10,0:10:21.06:0,21,346	0/0:22,0:22:57.16:0,57,987	1/1:6,6:13:24.07:547,24,0	1/1:2,13:18:20.89:473,21,0	0/0:12,0:12:27.09:0,27,499	0/0:9,0:9:24.08:0,24,456	0/0:14,0:14:30.10:0,30,557	0/0:14,0:14:33.10:0,33,594	0/0:25,0:25:66.20:0,66,1162	0/0:11,0:11:33.10:0,33,542	1/1:3,6:9:12.04:300,12,0	1/1:4,5:11:12.04:348,12,0	1/1:2,5:7:15.05:431,15,0	0/0:6,0:6:12.04:0,12,175	0/0:14,0:14:36.11:0,36,619	0/0:25,0:24:48.58:0,49,887	0/0:5,0:5:9.02:0,9,127	0/0:13,0:13:31.85:0,32,564	0/0:15,0:15:33.11:0,33,627	1/1:1,7:9:15.05:408,15,0	0/0:9,0:9:21.06:0,21,355	0/0:14,0:14:36.11:0,36,615	./.
chr10	78332024	.	GT	G	15300.16	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=14.490;DP=686;FS=0.295;HRun=2;HaplotypeScore=71.2396;InbreedingCoeff=1.0000;MQ=86.56;MQ0=0;MQRankSum=-4.373;QD=34.93;ReadPosRankSum=5.956;VQSLOD=4.8435;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:42.96:0,43,836	1/1:0,17:17:42.14:545,42,0	0/0:20,0:20:57.16:0,57,815	0/0:30,0:30:83.42:0,83,1202	1/1:1,24:25:66.21:853,66,0	0/0:19,0:19:57.17:0,57,815	0/0:26,0:26:75.24:0,75,1086	0/0:33,0:33:87.27:0,87,1251	0/0:29,0:29:87.27:0,87,1264	1/1:2,36:38:99:1346,105,0	1/1:1,28:29:63.20:817,63,0	1/1:0,17:17:39.13:506,39,0	1/1:0,28:28:78.03:1009,78,0	1/1:0,16:16:45.15:584,45,0	1/1:1,24:25:66.21:856,66,0	0/0:17,0:17:51.17:0,51,764	0/0:19,0:19:57.15:0,57,805	0/0:12,0:12:36.07:0,36,494	1/1:0,21:21:63.19:804,63,0	1/1:0,37:37:99:1374,108,0	1/1:0,16:16:45.15:584,45,0	1/1:0,21:21:57.18:730,57,0	1/1:0,39:39:99:1400,108,0	1/1:0,23:23:66.21:857,66,0	0/0:22,0:22:66.18:0,66,963	1/1:0,35:35:99:1361,105,0	1/1:0,33:33:87.28:1128,87,0	1/1:0,18:18:42.14:545,42,0
chr10	78332277	.	TTCCTCC	T	4095.73	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=4.033;DP=507;FS=5.286;HRun=0;HaplotypeScore=138.8309;InbreedingCoeff=0.6151;MQ=60.48;MQ0=17;MQRankSum=-7.888;QD=13.09;ReadPosRankSum=1.580;VQSLOD=2.7797;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:14.94:0,15,973	0/0:8,0:8:12.04:0,12,259	0/0:19,0:12:0:0,0,0	0/0:21,0:11:0.05:0,0,1	0/0:26,0:26:36.31:0,36,943	0/0:17,0:16:24.07:0,24,665	0/0:10,0:10:18.03:0,18,337	1/1:16,12:26:33.06:390,33,0	1/1:9,12:20:21.07:435,21,0	0/1:24,0:23:13.59:14,0,590	0/0:15,0:15:1.68:0,2,283	1/1:15,0:15:24.08:327,24,0	1/1:17,0:17:12.04:168,12,0	0/0:14,0:14:9.80:0,10,287	0/0:15,0:15:9.50:0,10,219	1/1:2,11:13:18.06:369,18,0	1/1:9,9:17:6.02:120,6,0	1/1:10,0:7:3.01:42,3,0	0/1:19,0:18:23.01:195,0,23	0/1:28,0:28:0.50:370,0,0	1/1:24,0:22:7.57:88,8,0	1/1:15,0:14:21.07:285,21,0	1/1:21,0:21:20.91:268,21,0	1/1:19,0:18:9.03:118,9,0	1/1:4,16:20:30.10:616,30,0	0/0:13,0:13:5.85:0,6,87	1/1:21,0:21:20.75:293,21,0	0/0:5,0:4:3.48:0,3,97
chr10	78332300	.	CCTCCTCCTCCTT	C	6798.55	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=-0.246;DP=502;FS=0.444;HRun=0;HaplotypeScore=167.9634;InbreedingCoeff=0.4042;MQ=61.12;MQ0=24;MQRankSum=1.561;QD=21.72;ReadPosRankSum=-3.118;VQSLOD=3.4948;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:41.34:0,41,2140	0/1:9,0:9:27.95:28,0,412	0/0:23,0:11:27.98:0,28,266	0/1:28,0:10:16.47:16,0,181	0/1:25,0:25:11.21:11,0,1514	0/0:15,0:14:39.12:0,39,1503	0/0:7,0:7:21.07:0,21,680	0/0:17,0:16:2.83:0,3,291	0/0:20,0:19:33.07:0,33,418	0/1:31,0:28:99:164,0,979	0/1:16,0:16:72.52:73,0,477	1/1:0,16:16:24.08:897,24,0	1/1:0,17:17:11.79:453,12,0	0/0:14,0:14:14.92:0,15,482	0/0:16,0:16:9.90:0,10,374	0/0:12,0:12:21.02:0,21,290	0/0:15,0:16:15.02:0,15,161	0/1:10,0:7:0.97:1,0,112	1/1:3,16:18:47.96:814,48,0	1/1:2,29:31:74.66:1451,75,0	1/1:5,17:19:9.03:301,9,0	1/1:1,14:14:24:732,24,0	1/1:0,20:20:21.73:697,22,0	1/1:3,11:13:9.03:280,9,0	0/0:22,0:22:48.11:0,48,635	0/1:8,0:7:39.48:39,0,148	1/1:1,22:23:20.78:793,21,0	0/1:9,0:8:47.42:47,0,90
chr10	78332304	.	C	CTCT	3131.69	PASS	AB=0.884;AC=14;AF=0.250;AN=56;BaseQRankSum=-2.633;DP=495;FS=7.410;HRun=0;HaplotypeScore=124.6019;InbreedingCoeff=0.6262;MQ=61.21;MQ0=24;MQRankSum=6.073;QD=20.88;ReadPosRankSum=0.581;VQSLOD=3.1340;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:48.66:0,49,621	1/1:0,8:9:14.25:266,14,0	0/0:22,0:10:10.34:0,10,154	0/0:27,0:10:19.27:0,19,206	1/1:1,24:25:54.23:1035,54,0	0/0:14,0:13:39.06:0,39,503	0/0:7,0:7:18.04:0,18,240	0/0:19,0:18:30.11:0,30,262	0/0:19,0:18:29.99:0,30,261	1/1:5,24:26:63.54:926,64,0	1/1:2,15:18:29.91:433,30,0	0/1:16,0:16:10.78:11,0,85	0/0:17,0:17:11.91:0,12,85	1/1:0,12:14:15.05:330,15,0	0/1:2,13:15:3.64:195,0,4	0/0:13,0:13:20.91:0,21,170	0/0:16,0:16:20.89:0,21,164	0/0:9,0:6:16.18:0,16,130	0/0:17,0:16:35.74:0,36,268	0/0:30,0:30:11.02:0,11,253	0/0:20,0:17:6.42:0,6,43	0/0:15,0:14:20.99:0,21,138	0/0:20,0:20:20.62:0,21,139	0/1:14,0:13:6.97:7,0,16	0/0:21,0:21:44.92:0,45,379	0/1:10,0:9:58.16:110,0,58	0/0:22,0:22:20.17:0,20,143	0/0:9,0:8:17.39:0,17,140
chr10	78333006	.	TACACACACACACAC	T	2205.78	PASS	AB=0.793;AC=20;AF=0.385;AN=52;BaseQRankSum=5.682;DP=391;FS=0.908;HRun=0;HaplotypeScore=164.8349;InbreedingCoeff=0.4647;MQ=62.94;MQ0=6;MQRankSum=-3.810;QD=13.45;ReadPosRankSum=-0.155;VQSLOD=2.7551;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:12:15.05:0,15,697	1/1:1,8:9:3.48:119,3,0	0/0:27,0:15:10.06:0,10,181	./.	1/1:4,15:20:0.47:1,0,0	0/0:9,0:20:24.08:0,24,1097	0/0:6,0:20:16.30:0,16,622	0/0:15,0:16:20.65:0,21,407	0/0:9,0:17:18.04:0,18,372	1/1:9,11:20:33.09:1070,33,0	1/1:8,14:23:0.94:2,1,0	1/1:5,0:6:0.47:1,0,0	0/0:4,0:5:6.02:0,6,174	1/1:6,11:17:3.01:119,3,0	./.	0/0:7,0:11:9.03:0,9,189	0/0:8,0:10:9.03:0,9,212	0/0:8,0:8:6.02:0,6,159	0/1:11,0:13:71.53:72,0,159	0/1:11,0:18:63.91:68,0,64	0/0:9,0:10:3.01:0,3,50	0/0:5,0:5:3.01:0,3,45	0/0:4,0:4:9.03:0,9,205	0/0:3,0:5:2.59:0,3,46	0/0:8,0:17:2.88:0,3,70	1/1:6,0:14:17.73:676,18,0	1/1:7,0:16:11.78:227,12,0	1/1:6,0:6:1.55:4,2,0
chr10	78333045	.	GTATA	G	707.42	PASS	AC=6;AF=0.130;AN=46;BaseQRankSum=4.372;DP=466;FS=0.000;HRun=0;HaplotypeScore=144.2320;InbreedingCoeff=0.7537;MQ=49.66;MQ0=13;MQRankSum=-5.945;QD=11.05;ReadPosRankSum=0.062;VQSLOD=2.6552;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:30.57:0,31,739	0/0:14,0:13:8.50:0,8,123	./.	0/0:26,0:7:16.69:0,17,187	0/0:33,0:33:38.92:0,39,916	0/0:21,0:23:46.40:0,46,1112	0/0:28,0:28:53.97:0,54,1247	0/0:25,0:26:48.16:0,48,1157	0/0:24,0:25:45.10:0,45,1029	0/0:31,0:32:93:0,93,1966	0/0:20,0:24:17.63:0,18,322	./.	0/0:5,0:5:3.01:0,3,68	0/0:13,0:13:12.04:0,12,259	0/0:18,0:19:26.40:0,26,549	0/0:18,0:18:41.72:0,42,849	0/0:13,0:13:26.50:0,27,578	0/0:5,0:6:11.71:0,12,205	1/1:7,9:13:27.09:448,27,0	1/1:2,24:26:2.65:49,3,0	./.	./.	0/0:4,0:4:3.01:0,3,30	./.	0/0:18,0:18:12.04:0,12,303	0/0:15,0:18:44.40:0,44,749	1/1:6,16:22:21.07:336,21,0	0/0:8,0:7:15.05:0,15,377
chr10	78333062	.	CGT	C	1167.85	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=6.090;DP=557;FS=25.650;HRun=0;HaplotypeScore=142.7234;InbreedingCoeff=0.7584;MQ=54.16;MQ0=17;MQRankSum=-1.330;QD=6.11;ReadPosRankSum=-3.650;VQSLOD=1.2568;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.21:0,63,1035	0/0:14,0:13:18.06:0,18,284	0/1:29,0:6:0:0,0,0	0/1:49,0:12:14.45:14,0,39	0/0:38,0:38:63.08:0,63,1032	0/0:21,0:21:51.17:0,51,841	0/0:27,0:27:66.22:0,66,1087	0/0:31,0:31:78.23:0,78,1274	0/0:24,0:24:57.19:0,57,906	0/0:39,0:39:99:0,105,1676	0/0:24,0:24:27.09:0,27,410	1/1:2,1:3:3.01:39,3,0	1/1:0,4:4:6.02:77,6,0	0/0:12,0:12:12.04:0,12,202	0/0:18,0:18:29.88:0,30,470	0/0:20,0:20:48.16:0,48,775	0/0:15,0:15:32.70:0,33,499	0/0:10,0:10:19.73:0,20,241	1/1:10,11:18:33.10:405,33,0	1/1:3,39:42:20.85:270,21,0	1/1:1,12:13:6.02:77,6,0	1/1:0,3:3:6.02:77,6,0	1/1:0,3:3:5.79:77,6,0	1/1:0,2:2:3.01:39,3,0	0/0:12,0:12:8.76:0,9,152	0/0:24,0:24:63.01:0,63,992	1/1:3,19:22:24.07:280,24,0	0/0:13,0:13:30.10:0,30,505
chr10	78334603	.	AT	A	4702.43	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=13.351;DP=517;FS=2.014;HRun=8;HaplotypeScore=50.4954;InbreedingCoeff=0.9584;MQ=74.01;MQ0=0;MQRankSum=-1.214;QD=24.62;ReadPosRankSum=2.291;VQSLOD=5.5729;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.27:0,87,1051	0/0:8,0:8:24.07:0,24,290	0/0:8,0:8:11.83:0,12,209	0/0:14,0:13:35.67:0,36,385	0/0:21,0:21:57.17:0,57,677	0/0:29,0:29:87.25:0,87,1038	0/0:13,0:13:30.08:0,30,352	0/0:33,0:33:93.27:0,93,1105	0/0:16,0:17:45.14:0,45,544	0/0:20,0:20:57.17:0,57,680	0/0:23,0:23:63.19:0,63,761	1/1:1,13:14:39.06:377,39,0	1/1:1,18:19:51.06:493,51,0	0/0:17,0:17:42.13:0,42,507	0/0:20,0:20:57.17:0,57,688	0/0:18,0:18:54.15:0,54,640	0/0:27,0:27:75.22:0,75,894	0/0:11,0:11:27.08:0,27,326	1/1:5,17:22:51.08:493,51,0	1/1:0,22:22:60.09:579,60,0	1/1:1,3:4:9.01:87,9,0	1/1:2,13:15:36.05:348,36,0	1/1:2,23:25:66.10:637,66,0	1/1:0,9:9:27.04:261,27,0	0/0:16,0:16:42.12:0,42,497	1/1:6,23:29:2.62:588,3,0	1/1:0,24:24:69.11:666,69,0	1/1:2,6:8:18.03:174,18,0
chr10	78335797	.	TACTATCAGAGC	T	2163.58	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.674;DP=574;FS=1.732;HRun=0;HaplotypeScore=179.3721;InbreedingCoeff=0.9270;MQ=83.26;MQ0=0;MQRankSum=-6.121;QD=67.61;ReadPosRankSum=1.772;VQSLOD=3.4852;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.24:0,78,4194	0/0:12,0:12:30.10:0,30,1684	0/0:22,0:22:57.19:0,57,2569	0/0:13,0:13:36.12:0,36,1418	0/0:33,0:33:87.28:0,87,4628	0/0:20,0:20:60.19:0,60,3255	0/0:18,0:18:54.19:0,54,2860	0/0:20,0:20:54.18:0,54,2732	0/0:26,0:26:78.25:0,78,4122	0/0:33,0:33:96.33:0,96,5262	0/0:27,0:27:81.28:0,81,4490	0/0:10,0:10:30.10:0,30,1631	0/0:17,0:17:45.15:0,45,2498	0/0:18,0:18:51.18:0,51,2892	0/0:18,0:18:51.17:0,51,2672	0/0:14,0:14:39.13:0,39,2180	0/0:11,0:11:30.10:0,30,1688	0/0:5,0:5:12.04:0,12,676	0/0:18,0:18:42.13:0,42,2160	0/0:30,0:30:81.28:0,81,3997	0/0:25,0:25:72.25:0,72,3909	0/0:25,0:25:69.24:0,69,3325	0/0:28,0:28:84.27:0,84,4440	0/0:13,0:13:39.13:0,39,2117	0/0:28,0:28:81.27:0,81,4356	1/1:2,21:23:63.22:2067,63,0	0/0:30,0:30:90.30:0,90,4841	1/1:4,5:9:6.02:208,6,0
chr10	78336460	.	AC	A	369.49	PASS	AB=0.679;AC=11;AF=0.423;AN=26;BaseQRankSum=-2.821;DP=405;FS=3.388;HRun=2;HaplotypeScore=27.8233;InbreedingCoeff=0.5367;MQ=12.91;MQ0=299;MQRankSum=-0.256;QD=3.00;ReadPosRankSum=-0.051;VQSLOD=-0.3339;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:10,3:3:9.03:117,9,0	1/1:62,0:1:2.68:11,3,0	0/0:73,0:1:3.01:0,3,36	0/1:10,9:8:0:0,0,0	0/0:21,0:7:3.01:0,3,45	./.	./.	./.	1/1:10,5:5:15.05:195,15,0	1/1:5,3:3:3.01:39,3,0	0/0:5,0:2:3:0,3,29	0/0:3,0:3:9.02:0,9,89	1/1:0,6:6:9.03:117,9,0	./.	./.	./.	./.	./.	./.	./.	0/0:9,0:5:12.03:0,12,123	0/0:11,0:4:2.74:0,3,31	./.	0/0:19,0:9:6.02:0,6,90	./.	./.	./.
chr10	78344386	.	AAG	A	2396.32	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=2.895;DP=289;FS=1.654;HRun=0;HaplotypeScore=43.9383;InbreedingCoeff=0.4115;MQ=46.66;MQ0=13;MQRankSum=-3.033;QD=10.51;ReadPosRankSum=-4.221;VQSLOD=2.0258;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:38.85:0,39,504	0/1:8,0:8:12.28:56,0,12	0/0:8,0:3:8.97:0,9,77	0/0:10,0:3:6.02:0,6,81	1/1:20,0:20:20.06:249,20,0	0/0:9,0:8:14.97:0,15,196	0/0:15,0:14:29.82:0,30,419	1/1:8,0:8:19.16:136,19,0	1/1:2,0:2:2.12:19,2,0	0/1:12,0:11:19.65:138,0,20	1/1:14,0:14:2.98:95,3,0	1/1:5,0:5:7.69:37,8,0	0/1:3,0:3:4.90:14,0,5	0/1:10,0:7:13.86:54,0,14	0/1:10,0:8:34.70:35,0,48	1/1:11,0:9:11.17:105,11,0	1/1:13,1:14:20.11:126,20,0	1/1:5,4:8:18.02:208,18,0	1/1:6,0:5:11.93:94,12,0	1/1:18,0:18:32:251,32,0	1/1:8,0:7:12.16:107,12,0	1/1:3,0:2:3:26,3,0	1/1:12,0:10:15.81:140,16,0	1/1:9,0:4:6.40:44,6,0	1/1:7,1:6:8.68:66,9,0	1/1:17,0:17:34.93:239,35,0	1/1:14,0:12:32.34:254,32,0	1/1:7,0:6:14.47:80,14,0
chr10	78344387	.	AG	A	3843.27	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=4.571;DP=277;FS=3.108;HRun=1;HaplotypeScore=35.4464;InbreedingCoeff=0.7793;MQ=47.74;MQ0=11;MQRankSum=-2.324;QD=17.71;ReadPosRankSum=-2.784;VQSLOD=2.9804;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:36.33:0,36,374	1/1:7,1:8:14.01:135,14,0	0/0:8,0:3:8.97:0,9,77	0/0:10,1:4:6:0,6,71	1/1:15,4:19:44.56:403,45,0	0/0:7,0:6:14.95:0,15,151	0/0:15,0:14:27.98:0,28,337	1/1:0,8:8:23.92:200,24,0	1/1:2,0:2:4.21:24,4,0	1/1:11,0:11:23.18:192,23,0	1/1:13,1:14:23.75:195,24,0	1/1:5,0:5:12.29:81,12,0	1/1:3,0:3:5:26,5,0	1/1:8,2:7:12.52:161,13,0	1/1:9,0:7:5.50:68,6,0	1/1:5,4:8:22.04:200,22,0	1/1:1,12:13:21.03:263,21,0	1/1:9,0:8:20.85:151,21,0	1/1:5,0:4:11.95:98,12,0	1/1:15,2:17:38.60:301,39,0	1/1:4,4:7:15.44:144,15,0	1/1:3,0:2:3.48:36,3,0	1/1:13,0:11:24.47:170,24,0	1/1:9,0:4:6.44:47,6,0	1/1:3,5:6:8.98:99,9,0	1/1:0,14:14:35.97:411,36,0	1/1:10,3:11:32.59:254,33,0	1/1:3,4:6:15.01:185,15,0
chr10	78344391	.	AG	A	743.82	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=4.075;DP=262;FS=2.428;HRun=1;HaplotypeScore=42.1317;InbreedingCoeff=0.2431;MQ=50.02;MQ0=9;MQRankSum=-6.146;QD=7.59;ReadPosRankSum=-1.710;VQSLOD=0.2963;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:45.13:0,45,648	0/0:6,0:6:8.18:0,8,38	0/0:8,0:3:9.03:0,9,138	0/0:11,0:4:9.03:0,9,128	0/0:15,1:16:4.80:0,5,151	0/0:8,0:7:3.18:0,3,215	0/0:14,0:13:36.12:0,36,535	0/0:10,0:10:20.05:0,20,165	0/0:2,0:2:2.29:0,2,40	0/0:11,0:11:23.99:0,24,226	0/1:10,0:10:42.97:52,0,43	0/1:5,0:5:10.08:20,0,10	0/1:4,0:4:10.46:10,0,52	0/1:10,0:7:26.91:27,0,96	0/0:10,0:8:12.68:0,13,171	0/0:10,0:9:1.60:0,2,114	0/1:14,0:14:13.02:13,0,47	0/0:9,0:8:20.71:0,21,140	1/1:5,0:4:11.95:96,12,0	1/1:12,2:14:33.75:273,34,0	1/1:3,2:4:11.98:120,12,0	1/1:2,0:1:3.01:34,3,0	0/1:9,0:7:30.93:31,0,40	0/1:7,0:3:10.44:14,0,10	0/0:9,0:7:0.13:0,0,31	0/0:14,0:14:28.87:0,29,201	1/1:11,2:11:29.45:224,29,0	0/0:6,0:6:9.72:0,10,34
chr10	78346335	.	CTGTG	C	2931.47	PASS	AB=0.838;AC=16;AF=0.286;AN=56;BaseQRankSum=1.540;DP=791;FS=3.050;HRun=0;HaplotypeScore=156.4040;InbreedingCoeff=0.5249;MQ=62.29;MQ0=17;MQRankSum=1.669;QD=11.77;ReadPosRankSum=1.972;VQSLOD=3.3533;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:41:68.22:0,68,1150	1/1:0,9:9:15.05:242,15,0	0/0:36,0:5:3.43:0,3,20	0/0:46,0:10:2.98:0,3,21	1/1:8,16:24:30.10:485,30,0	0/0:19,0:21:26.83:0,27,575	0/1:17,3:21:55.48:55,0,538	0/0:21,0:20:39.11:0,39,687	0/0:26,0:27:53.90:0,54,1131	1/1:18,15:32:21.06:611,21,0	1/1:5,9:16:5.47:209,5,0	0/0:12,0:31:6.47:0,6,77	0/0:13,0:27:20.52:0,21,244	1/1:9,21:30:42.14:658,42,0	1/1:6,22:31:51.17:824,51,0	0/0:32,0:36:50.60:0,51,968	0/0:30,1:35:4.64:0,5,987	0/0:17,0:17:44.88:0,45,907	0/0:10,0:18:20.51:0,21,258	0/0:12,0:29:12.24:0,12,638	0/0:26,0:65:65.92:0,66,1028	0/1:29,0:32:10.27:10,0,85	0/0:17,0:20:14.74:0,15,114	0/0:10,0:25:5.78:0,6,46	0/1:18,1:23:6.61:7,0,737	0/1:16,1:29:11.41:11,0,157	0/0:11,0:29:34.16:0,34,509	0/0:12,0:12:2.90:0,3,16
chr10	78346857	.	A	AACACACAC	4940.93	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=3.782;DP=431;FS=1.447;HRun=0;HaplotypeScore=137.7435;InbreedingCoeff=0.7262;MQ=60.92;MQ0=10;MQRankSum=-4.480;QD=16.98;ReadPosRankSum=-1.648;VQSLOD=3.8504;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:24.05:0,24,365	1/1:7,0:7:3.01:39,3,0	0/0:20,0:8:5.93:0,6,45	0/0:29,0:17:7.83:0,8,75	1/1:18,0:18:5.58:151,6,0	0/0:18,0:18:24.53:0,25,634	0/0:17,0:18:21.75:0,22,263	1/1:14,0:14:7.52:63,8,0	1/1:13,0:13:9.01:229,9,0	0/1:15,0:15:9.09:151,0,9	1/1:21,0:19:8.81:207,9,0	1/1:12,0:12:11.77:242,12,0	1/1:13,0:12:15.03:248,15,0	1/1:8,0:8:6:127,6,0	1/1:12,0:12:9.03:250,9,0	1/1:17,0:15:21.91:444,22,0	1/1:21,0:20:14.34:268,14,0	1/1:13,0:13:18.52:226,19,0	1/1:13,0:11:5.03:31,5,0	0/0:13,0:13:14.96:0,15,193	0/0:13,0:12:20.41:0,20,297	1/1:12,0:12:12.02:245,12,0	1/1:13,4:17:8.15:312,8,0	1/1:21,0:21:18.47:339,18,0	1/1:17,0:17:24.50:540,24,0	1/1:19,0:19:41.71:585,42,0	0/0:11,0:11:11.68:0,12,120	1/1:2,6:8:6.02:244,6,0
chr10	78346985	.	A	AGT	74.49	PASS	AB=0.964;AC=11;AF=0.324;AN=34;BaseQRankSum=-1.365;DP=431;FS=5.076;HRun=0;HaplotypeScore=64.2214;InbreedingCoeff=0.2248;MQ=65.61;MQ0=12;MQRankSum=0.805;QD=0.51;ReadPosRankSum=-0.315;VQSLOD=0.5975;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:5.79:38,0,6	./.	./.	./.	./.	0/0:15,0:15:3.01:0,3,32	0/0:26,0:26:12.33:0,12,110	./.	0/0:11,0:11:3:0,3,32	1/1:15,0:15:1.25:3,1,0	./.	0/0:11,0:11:0.47:0,0,1	0/1:10,0:10:0.33:0,0,0	./.	0/0:12,0:14:2.71:0,3,14	./.	0/1:12,0:15:0:0,0,0	0/0:18,0:20:13.74:0,14,84	./.	0/0:10,0:12:0:0,0,0	1/1:49,0:47:0.47:1,0,0	0/1:13,0:13:0:0,0,0	1/1:6,1:7:3.01:44,3,0	0/1:17,4:20:16.20:76,0,16	./.	0/0:12,0:12:3:0,3,32	./.	0/0:5,0:5:2.80:0,3,32
chr10	78348015	.	CAGA	C	5737.34	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=3.377;DP=780;FS=5.639;HRun=0;HaplotypeScore=132.5963;InbreedingCoeff=1.0000;MQ=80.51;MQ0=0;MQRankSum=-3.152;QD=36.78;ReadPosRankSum=2.984;VQSLOD=5.9424;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.32:0,96,2057	1/1:1,14:15:39.13:616,39,0	0/0:27,0:27:57.20:0,57,1210	0/0:29,0:29:72.48:0,72,1469	1/1:3,27:30:69.15:1062,69,0	0/0:28,0:28:78.27:0,78,1665	0/0:25,0:25:69.21:0,69,1386	0/0:35,0:35:96.32:0,96,2051	0/0:41,0:41:99:0,117,2493	1/1:2,26:28:78.24:1208,78,0	1/1:1,19:20:42.14:665,42,0	0/0:32,0:32:90.31:0,90,1950	0/0:27,0:27:78.25:0,78,1660	1/1:4,21:25:51.17:808,51,0	1/1:3,35:38:87.30:1378,87,0	0/0:24,0:24:66.23:0,66,1419	0/0:24,0:24:69.24:0,69,1508	0/0:18,0:18:51.17:0,51,1076	0/0:20,0:20:51.13:0,51,1013	0/0:39,0:39:99:0,105,2251	0/0:29,0:29:81.27:0,81,1706	0/0:29,0:29:78.25:0,78,1600	0/0:22,0:22:66.16:0,66,1317	0/0:36,0:36:99:0,102,2200	0/0:23,0:23:63.20:0,63,1275	0/0:34,0:34:99:0,99,2161	0/0:21,0:20:60.21:0,60,1309	0/0:25,0:25:72.25:0,72,1573
chr10	78349614	.	C	CCT	361.06	PASS	AB=0.639;AC=7;AF=0.125;AN=56;BaseQRankSum=0.701;DP=558;FS=11.662;HRun=0;HaplotypeScore=115.0388;InbreedingCoeff=0.0931;MQ=65.14;MQ0=0;MQRankSum=-1.784;QD=3.47;ReadPosRankSum=-0.580;VQSLOD=1.4347;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.17:0,96,1361	0/0:11,0:11:26.88:0,27,237	0/0:25,0:21:41.32:0,41,357	0/1:11,0:10:5.22:5,0,212	0/0:23,0:23:56.70:0,57,529	0/0:21,0:21:63.21:0,63,974	0/0:16,0:16:45.13:0,45,697	0/0:14,0:30:60.68:0,61,406	0/0:5,0:20:46.47:0,46,258	0/0:22,0:22:66:0,66,619	0/0:24,0:24:68.42:0,68,570	0/1:1,1:16:2.49:109,0,2	0/1:5,0:17:59.32:59,0,81	0/0:2,0:17:35.95:0,36,163	0/0:20,0:20:57:0,57,529	0/0:5,0:18:44.94:0,45,279	0/0:2,0:11:25.30:0,25,105	0/0:2,0:9:18.48:0,18,118	0/0:14,0:30:33.51:0,34,321	0/0:8,0:33:25.53:0,26,321	0/0:2,0:20:43.19:0,43,209	0/1:4,0:19:43.28:125,0,43	0/1:3,0:19:58.39:89,0,58	0/1:2,0:14:0.97:90,0,1	0/0:5,0:27:49.55:0,50,275	0/0:11,0:21:17.52:0,18,300	0/0:6,0:19:31.80:0,32,233	0/1:5,0:8:8.96:9,0,90
chr10	78349624	.	T	TA	2236.35	PASS	AB=0.995;AC=19;AF=0.339;AN=56;BaseQRankSum=11.404;DP=553;FS=10.113;HRun=0;HaplotypeScore=94.0808;InbreedingCoeff=0.3492;MQ=71.39;MQ0=0;MQRankSum=-3.734;QD=8.80;ReadPosRankSum=7.982;VQSLOD=2.6189;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:95.94:0,96,1198	1/1:0,10:10:26.91:282,27,0	0/0:24,0:19:12.89:0,13,208	0/0:13,0:12:8.42:0,8,174	1/1:3,18:21:34.88:430,35,0	0/0:23,0:23:69.18:0,69,904	0/0:19,0:19:54.14:0,54,689	0/0:30,0:30:38.75:0,39,425	0/1:18,0:18:18.35:18,0,72	1/1:4,17:21:62.75:608,63,0	1/1:2,19:21:54.54:548,55,0	0/0:15,0:15:23.09:0,23,132	0/0:18,0:18:31.43:0,31,232	0/1:18,0:18:12:12,0,61	1/1:1,16:17:45.03:469,45,0	0/1:16,0:16:5.04:5,0,93	0/1:11,0:11:13.18:13,0,36	0/1:9,0:9:3.64:4,0,56	0/0:29,0:29:28.11:0,28,289	0/0:34,0:34:9.93:0,10,279	0/1:23,0:23:11.11:11,0,92	0/0:17,0:17:34.66:0,35,205	0/0:20,0:20:24.98:0,25,159	0/0:17,0:17:35.35:0,35,233	0/1:29,0:29:10.81:11,0,158	0/1:19,1:20:6.39:6,0,273	0/1:20,0:20:1.04:1,0,178	0/0:8,0:8:10.15:0,10,132
chr10	78349626	.	T	TAAA	4211.75	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.890;DP=543;FS=31.113;HRun=3;HaplotypeScore=106.7556;InbreedingCoeff=0.9352;MQ=73.71;MQ0=0;MQRankSum=-6.370;QD=46.28;ReadPosRankSum=0.482;VQSLOD=3.0625;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.26:0,87,1322	1/1:11,0:11:29.11:473,29,0	0/0:23,0:18:21.01:0,21,275	0/0:14,0:13:3.81:0,4,223	1/1:21,0:21:55.99:904,56,0	0/0:23,0:23:60.20:0,60,955	0/0:19,0:19:57.19:0,57,905	0/0:28,0:28:72.19:0,72,993	0/0:18,0:18:48.15:0,48,604	1/1:18,4:22:63.21:1147,63,0	1/1:18,2:20:59.15:882,59,0	0/0:14,0:14:13.03:0,13,316	0/0:17,0:17:29.88:0,30,419	0/0:18,0:18:44.98:0,45,536	1/1:16,1:17:45.15:806,45,0	0/0:16,0:16:45.09:0,45,562	0/0:12,0:12:33.10:0,33,413	0/0:11,0:11:24.03:0,24,290	0/0:28,0:28:66.14:0,66,878	0/0:32,0:32:90.19:0,90,1121	0/0:23,0:23:54.03:0,54,643	0/0:16,0:17:18.61:0,19,467	0/0:19,0:19:36.07:0,36,458	0/0:17,0:17:39.08:0,39,519	0/0:27,0:27:72.12:0,72,877	0/0:17,0:17:6.68:0,7,620	0/0:20,0:20:45.13:0,45,598	0/0:8,0:8:21.04:0,21,282
chr10	78352839	.	T	TCC	607.41	PASS	AB=0.943;AC=12;AF=0.240;AN=50;BaseQRankSum=6.493;DP=293;FS=6.749;HRun=2;HaplotypeScore=103.3743;InbreedingCoeff=-0.3556;MQ=28.82;MQ0=52;MQRankSum=-2.576;QD=5.15;ReadPosRankSum=0.189;VQSLOD=-0.5524;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:19:15.18:0,15,514	0/1:1,1:2:45.51:52,0,46	./.	./.	0/0:5,0:4:9.08:0,9,96	0/0:20,0:20:32.69:0,33,468	0/0:24,0:19:42.75:0,43,535	0/0:25,0:14:24.53:0,25,332	0/1:12,0:9:26.57:27,0,127	0/1:7,1:5:40.26:147,0,40	0/1:6,1:5:49.95:50,0,61	0/1:8,0:8:26.31:26,0,212	0/0:10,0:7:18.04:0,18,248	0/1:12,0:9:18.78:19,0,214	0/1:13,2:13:99:149,0,129	0/1:12,0:10:99:154,0,123	0/0:11,0:8:17.80:0,18,192	0/0:6,0:4:8.89:0,9,87	0/1:9,0:8:26.08:26,0,89	0/0:9,0:7:9.03:0,9,147	0/0:11,0:7:7.17:0,7,63	0/0:10,0:9:0.60:0,1,210	0/1:9,0:6:22.94:23,0,148	0/0:14,0:14:13.94:0,14,172	0/0:4,0:4:10.85:0,11,141	0/1:18,0:14:45.15:45,0,306	0/1:6,0:5:30.57:31,0,116	./.
chr10	78352847	.	T	TCTC	748.74	PASS	AB=0.960;AC=11;AF=0.220;AN=50;BaseQRankSum=9.142;DP=306;FS=16.767;HRun=0;HaplotypeScore=121.1436;InbreedingCoeff=0.0697;MQ=30.03;MQ0=52;MQRankSum=-2.120;QD=6.09;ReadPosRankSum=2.606;VQSLOD=1.6657;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,2:19:99:159,0,281	1/1:2,0:2:3.83:20,4,0	./.	./.	0/0:3,0:2:4.12:0,4,18	0/1:21,1:22:99:326,0,181	0/1:23,1:19:99:173,0,401	0/0:25,0:13:25.18:0,25,379	0/0:13,0:9:16.53:0,17,345	0/1:7,0:5:42.73:44,0,43	0/1:6,0:4:4.52:5,0,44	0/0:7,0:7:13.11:0,13,254	0/0:15,0:12:22.88:0,23,363	0/0:13,0:10:18.14:0,18,367	1/1:15,0:13:5.28:133,5,0	0/1:13,0:11:1.94:2,0,186	0/0:12,0:9:18.53:0,19,301	0/0:6,0:4:9.03:0,9,151	0/0:11,0:10:24.45:0,24,325	0/0:11,0:8:8.54:0,9,115	0/0:12,0:8:7.13:0,7,106	0/0:10,0:9:10.95:0,11,214	0/1:11,0:8:22.06:22,0,239	0/0:15,0:15:21.36:0,21,416	0/0:3,0:3:8.89:0,9,94	0/0:18,0:14:17.74:0,18,407	0/0:7,0:6:10.95:0,11,145	./.
chr10	78352848	.	T	TGC	151.08	PASS	AB=0.943;AC=9;AF=0.180;AN=50;BaseQRankSum=7.039;DP=310;FS=13.835;HRun=0;HaplotypeScore=114.7727;InbreedingCoeff=-0.1175;MQ=30.19;MQ0=50;MQRankSum=-2.566;QD=1.80;ReadPosRankSum=-0.389;VQSLOD=1.1244;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:7.75:0,8,247	1/1:1,0:1:0.89:2,1,0	./.	./.	0/0:3,0:2:3.28:0,3,9	0/0:21,0:22:1.92:0,2,240	0/0:25,0:20:20.24:0,20,357	0/0:25,0:13:24.25:0,24,337	0/0:13,0:9:15.55:0,16,329	0/1:7,1:6:41.55:42,0,64	0/0:6,0:4:1.41:0,1,56	0/1:8,0:8:0.54:1,0,218	0/0:14,0:12:20.57:0,21,348	0/0:12,0:10:15.16:0,15,334	0/1:11,5:14:31.86:176,0,32	0/1:13,0:11:19.78:20,0,182	0/0:12,0:9:18.53:0,19,287	0/0:7,0:5:9.03:0,9,145	0/0:11,0:11:20.97:0,21,231	0/1:12,0:9:8.03:8,0,75	0/0:12,0:8:10.67:0,11,81	0/0:10,0:9:12.83:0,13,187	0/0:10,0:8:3.08:0,3,246	0/0:15,0:15:0.83:0,1,335	0/0:3,0:3:7.20:0,7,62	0/1:18,0:14:3.58:4,0,321	0/1:7,0:6:7.19:7,0,78	./.
chr10	78352852	.	TC	T	290.07	PASS	AB=0.928;AC=14;AF=0.280;AN=50;BaseQRankSum=2.077;DP=315;FS=2.503;HRun=3;HaplotypeScore=106.8777;InbreedingCoeff=-0.3458;MQ=30.76;MQ0=52;MQRankSum=-0.281;QD=1.67;ReadPosRankSum=1.687;VQSLOD=-0.2708;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:17:5.87:0,6,51	0/0:2,0:2:3:0,3,25	./.	./.	0/1:4,0:3:0:0,0,0	0/1:19,0:20:3.44:3,0,102	0/1:23,0:18:54.96:55,0,209	0/0:26,0:13:12.01:0,12,131	0/0:13,0:9:8.80:0,9,53	0/1:5,2:7:30.83:101,0,31	0/0:6,0:4:1.31:0,1,4	0/0:7,0:8:3.74:0,4,75	0/0:14,0:12:2.13:0,2,117	0/0:13,0:11:17:0,17,175	0/1:10,5:14:37.24:96,0,37	0/1:12,1:11:18.89:19,0,73	0/1:11,1:9:14.34:34,0,14	0/1:6,1:5:26.60:27,0,114	0/0:12,0:12:3.88:0,4,204	0/1:12,1:10:17.24:17,0,34	0/1:12,0:8:12.84:15,0,13	0/1:11,1:11:20.55:21,0,83	0/1:10,1:9:1.49:1,0,88	0/1:15,1:16:14.14:14,0,75	0/0:3,0:2:1.32:0,1,5	0/0:17,0:14:15.84:0,16,148	0/1:7,0:6:14.36:14,0,55	./.
chr10	78352853	.	CCCTT	C	1339.08	PASS	AB=0.925;AC=18;AF=0.429;AN=42;BaseQRankSum=-5.785;DP=315;FS=2.258;HRun=0;HaplotypeScore=114.8630;InbreedingCoeff=0.5215;MQ=31.04;MQ0=52;MQRankSum=4.649;QD=9.17;ReadPosRankSum=-1.060;VQSLOD=2.5593;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:18:12.70:213,0,13	0/0:2,0:2:3.01:0,3,35	./.	./.	./.	0/0:20,0:20:17.41:0,17,162	0/0:23,0:18:8.98:0,9,84	./.	1/1:11,2:9:15.05:201,15,0	0/0:8,0:7:7.29:0,7,36	./.	0/1:7,1:8:2.18:114,0,2	1/1:15,0:12:12.04:178,12,0	1/1:10,4:11:12:158,12,0	0/0:16,0:14:20.39:0,20,165	0/1:10,3:11:10.64:65,0,11	1/1:7,4:8:6.49:90,6,0	0/0:7,0:5:9.03:0,9,148	0/0:13,0:12:5.96:0,6,52	0/0:13,0:10:2.92:0,3,17	0/1:12,0:8:1:1,0,10	1/1:12,0:11:7.55:118,8,0	1/1:11,0:9:10.26:108,10,0	1/1:16,0:16:16.78:249,17,0	./.	0/0:19,0:14:17.74:0,18,139	0/0:7,0:6:11.03:0,11,95	./.
chr10	78352857	.	T	TGC	2109.80	PASS	AB=0.846;AC=20;AF=0.400;AN=50;BaseQRankSum=4.581;DP=314;FS=30.120;HRun=0;HaplotypeScore=111.3778;InbreedingCoeff=-0.7111;MQ=31.70;MQ0=53;MQRankSum=-4.380;QD=7.96;ReadPosRankSum=2.468;VQSLOD=1.7418;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,3:18:86.06:159,0,86	0/1:1,1:2:42.73:53,0,43	./.	./.	0/0:3,0:2:2.04:0,2,6	0/1:15,5:20:99:378,0,182	0/1:23,1:17:95.72:96,0,255	0/0:22,1:9:9.50:0,10,147	0/1:13,1:11:31.01:31,0,188	0/1:10,1:10:99:198,0,132	0/1:5,2:5:47.49:47,0,74	0/1:8,1:9:87.93:88,0,89	0/1:14,1:12:89.77:90,0,220	0/1:13,1:11:64.13:64,0,250	0/1:15,2:15:99:106,0,118	0/1:8,4:10:69.13:209,0,69	0/0:11,0:8:12.59:0,13,78	0/0:7,0:5:12.04:0,12,189	0/1:10,3:12:90.35:90,0,276	0/1:9,2:9:45.12:45,0,64	0/1:9,1:8:43.05:43,0,83	0/1:10,1:10:36.33:36,0,134	0/1:9,2:9:83.75:84,0,204	0/1:15,3:18:99:119,0,213	0/0:3,0:2:3:0,3,28	0/1:11,3:9:99:215,0,147	0/1:5,1:6:68.94:101,0,69	./.
chr10	78352868	.	T	TCTC	155.15	PASS	AB=0.921;AC=5;AF=0.100;AN=50;BaseQRankSum=4.170;DP=321;FS=9.049;HRun=0;HaplotypeScore=107.2255;InbreedingCoeff=0.0603;MQ=34.75;MQ0=54;MQRankSum=-3.972;QD=2.15;ReadPosRankSum=2.091;VQSLOD=1.3453;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,1:18:16.56:17,0,337	0/0:2,0:2:6.01:0,6,81	./.	./.	1/1:4,0:3:0.47:1,0,0	0/1:18,4:22:99:202,0,341	0/1:24,1:18:32.92:33,0,342	0/0:18,0:5:12.01:0,12,189	0/0:15,0:12:23.99:0,24,421	0/0:10,0:9:25.88:0,26,395	0/0:10,0:7:15.05:0,15,232	0/0:8,0:7:20.70:0,21,193	0/0:13,0:10:26.52:0,27,270	0/0:11,0:8:20.54:0,21,269	0/0:17,0:15:21.82:0,22,479	0/0:10,0:10:19.96:0,20,250	0/0:12,0:9:12.03:0,12,155	0/0:8,0:6:15.05:0,15,264	0/0:11,0:11:27.80:0,28,373	0/0:11,0:8:11.61:0,12,113	0/0:18,0:14:24.77:0,25,170	0/0:9,0:8:17.73:0,18,210	0/0:13,0:11:29.59:0,30,369	0/0:18,0:18:37.66:0,38,521	0/0:5,0:3:9:0,9,116	0/0:15,0:10:6.07:0,6,256	0/0:8,0:7:11.01:0,11,115	./.
chr10	78352869	.	T	TC	440.51	PASS	AB=0.804;AC=5;AF=0.096;AN=52;BaseQRankSum=-0.682;DP=321;FS=12.832;HRun=2;HaplotypeScore=94.2368;InbreedingCoeff=-0.0493;MQ=34.88;MQ0=53;MQRankSum=-0.931;QD=7.59;ReadPosRankSum=-1.615;VQSLOD=-0.5421;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:18:42.79:0,43,308	0/0:2,0:2:6.01:0,6,66	0/0:3,0:1:2.98:0,3,21	./.	0/0:4,0:3:3.85:0,4,22	0/0:22,0:22:42.51:0,43,381	0/0:25,0:18:31.98:0,32,300	0/0:18,0:5:9.03:0,9,107	0/0:14,0:12:8.70:0,9,253	0/0:10,0:9:8.66:0,9,251	0/0:11,0:8:18.03:0,18,193	0/0:8,0:7:20.64:0,21,158	0/0:13,0:10:26.55:0,27,192	0/1:9,1:7:14.55:15,0,137	0/0:17,0:15:35.97:0,36,374	0/0:11,0:10:23.88:0,24,219	0/0:12,0:9:11.86:0,12,98	0/0:8,0:6:15.05:0,15,184	0/1:8,3:11:97.27:97,0,163	0/1:9,2:8:32.21:32,0,56	0/1:12,6:14:12.03:285,0,12	0/0:9,0:8:16.12:0,16,133	0/0:13,0:11:26.65:0,27,245	0/0:18,0:18:35.21:0,35,288	0/0:5,0:3:8.97:0,9,93	0/0:15,0:10:19.96:0,20,226	0/1:5,3:7:5.50:125,0,5	./.
chr10	78353084	.	GACACAC	G	884.88	PASS	AB=0.869;AC=14;AF=0.292;AN=48;BaseQRankSum=2.494;DP=507;FS=0.000;HRun=0;HaplotypeScore=123.0847;InbreedingCoeff=0.6337;MQ=59.33;MQ0=3;MQRankSum=-3.588;QD=6.23;ReadPosRankSum=0.888;VQSLOD=2.3655;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:31:30.08:0,30,753	./.	./.	./.	./.	0/0:12,0:19:20.02:0,20,546	0/0:16,0:19:13.60:0,14,271	0/0:25,0:25:18.05:0,18,363	0/0:5,0:16:9.03:0,9,184	0/0:24,0:22:18.03:0,18,330	0/0:13,0:13:2.71:0,3,89	1/1:5,1:6:6.49:121,6,0	1/1:8,4:12:9.03:182,9,0	0/0:12,0:18:9.50:0,10,198	0/0:17,0:17:6.02:0,6,104	0/0:9,0:22:18.03:0,18,403	0/0:11,0:24:24.08:0,24,625	0/1:21,0:22:3.34:36,0,3	0/0:19,0:17:15.05:0,15,390	0/0:5,0:10:3.01:0,3,78	0/0:22,0:22:30.10:0,30,710	1/1:9,1:10:3.01:61,3,0	1/1:10,7:18:11.25:148,11,0	1/1:26,11:35:18.06:363,18,0	0/0:6,0:11:21.07:0,21,467	0/1:18,1:25:48.30:48,0,73	0/0:8,0:13:12.04:0,12,245	1/1:4,1:12:11.67:87,12,0
chr10	78355565	.	C	CT	572.29	PASS	AB=0.900;AC=3;AF=0.054;AN=56;BaseQRankSum=-2.455;DP=559;FS=4.305;HRun=8;HaplotypeScore=58.6010;InbreedingCoeff=0.6569;MQ=74.23;MQ0=4;MQRankSum=-2.195;QD=17.88;ReadPosRankSum=1.275;VQSLOD=3.6433;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:72.55:0,73,742	0/0:6,0:6:15.01:0,15,137	0/0:26,0:23:54:0,54,484	0/0:16,0:16:24.89:0,25,218	0/0:30,0:30:75.03:0,75,686	0/0:21,0:21:57.03:0,57,522	0/1:8,1:9:10.60:11,0,168	0/0:39,0:39:80.96:0,81,723	0/0:27,0:27:66.02:0,66,603	0/0:18,0:18:42.01:0,42,384	0/0:14,0:14:42.02:0,42,384	0/0:17,0:17:50.98:0,51,456	0/0:24,0:24:63.03:0,63,576	0/0:13,0:13:36.02:0,36,329	0/0:18,0:18:48.02:0,48,439	0/0:12,0:12:36.01:0,36,325	0/0:23,0:23:57.02:0,57,522	1/1:5,18:22:59.91:664,60,0	0/0:21,0:20:54.02:0,54,494	0/0:19,0:19:45.01:0,45,407	0/0:20,0:19:48.01:0,48,439	0/0:13,0:13:33.02:0,33,302	0/0:17,0:17:45.02:0,45,412	0/0:22,0:22:59.98:0,60,535	0/0:10,0:10:21:0,21,192	0/0:17,0:17:48.03:0,48,439	0/0:24,0:24:63.03:0,63,576	0/0:23,0:23:66.04:0,66,604
chr10	78355784	.	T	TTA	3128.54	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=3.788;DP=320;FS=2.302;HRun=0;HaplotypeScore=68.6798;InbreedingCoeff=0.6512;MQ=80.29;MQ0=4;MQRankSum=-2.461;QD=14.97;ReadPosRankSum=-2.317;VQSLOD=2.8101;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:63.21:0,63,835	1/1:2,0:2:1.55:4,2,0	0/0:27,0:11:5.46:0,5,29	0/0:44,0:21:8.60:0,9,104	1/1:16,0:16:23.21:264,23,0	0/0:10,0:10:30.10:0,30,398	0/0:3,0:3:6.02:0,6,79	1/1:31,0:29:61.36:369,61,0	1/1:6,0:6:7.11:51,7,0	1/1:5,0:5:8.99:88,9,0	1/1:7,0:7:9.03:106,9,0	1/1:1,1:2:3.01:52,3,0	1/1:0,4:4:9.03:156,9,0	1/1:2,0:2:0.89:2,1,0	1/1:3,0:3:3.01:36,3,0	1/1:4,0:4:11.67:99,12,0	1/1:26,0:26:47.77:244,48,0	1/1:22,0:22:32.13:389,32,0	1/1:14,0:14:38.24:365,38,0	1/1:5,0:5:11.27:53,11,0	1/1:9,0:9:19.55:211,20,0	1/1:0,2:2:6.02:86,6,0	1/1:6,1:7:3.01:52,3,0	1/1:1,2:4:3.01:52,3,0	1/1:8,0:8:7.23:32,7,0	1/1:9,0:9:23.46:184,23,0	1/1:11,0:11:29.12:228,29,0	1/1:10,0:10:23.07:166,23,0
chr10	78355791	.	T	TATTA	4552.04	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=4.324;DP=330;FS=14.769;HRun=0;HaplotypeScore=72.4389;InbreedingCoeff=0.4654;MQ=81.72;MQ0=3;MQRankSum=-4.819;QD=24.61;ReadPosRankSum=-2.635;VQSLOD=2.8882;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.23:0,69,1363	1/1:1,0:1:3.01:51,3,0	0/0:31,0:14:5.50:0,5,68	0/0:43,0:22:5.69:0,6,143	1/1:2,15:17:33.10:418,33,0	0/0:11,0:11:33.11:0,33,655	0/0:6,0:6:18.06:0,18,279	1/1:10,9:24:59.53:966,60,0	1/1:3,0:5:10.12:137,10,0	1/1:0,6:6:9.03:241,9,0	1/1:1,6:7:12.04:242,12,0	1/1:1,0:1:2.80:13,3,0	1/1:4,0:4:8.39:39,8,0	1/1:3,0:5:6.90:71,7,0	1/1:1,4:5:6.02:123,6,0	1/1:0,0:5:12.04:303,12,0	1/1:6,2:24:47.35:795,47,0	1/1:0,21:22:36.12:936,36,0	0/1:16,0:16:50.18:50,0,108	0/0:6,0:6:15:0,15,141	0/1:11,0:11:1.37:1,0,177	0/0:6,0:6:1.09:0,1,126	0/0:5,0:5:1.87:0,2,127	0/1:4,0:4:7.12:7,0,31	1/1:1,0:5:7.58:120,8,0	0/1:7,0:7:24.77:25,0,52	0/1:13,0:13:14.01:14,0,159	0/0:12,0:12:17.45:0,17,300
chr10	78356788	.	G	GT	2417.26	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-6.397;DP=749;FS=1.783;HRun=10;HaplotypeScore=78.9482;InbreedingCoeff=0.9867;MQ=70.22;MQ0=0;MQRankSum=0.762;QD=18.88;ReadPosRankSum=0.026;VQSLOD=4.3198;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:98.87:0,99,810	0/0:14,1:16:15.29:0,15,315	0/0:26,0:23:23.34:0,23,266	0/0:17,0:11:17.83:0,18,129	0/0:36,0:36:89.87:0,90,738	0/0:23,1:24:24.57:0,25,391	0/0:21,1:22:27.95:0,28,436	0/0:35,0:35:86.85:0,87,711	0/0:20,0:21:46.96:0,47,375	0/0:28,0:29:73.06:0,73,593	0/0:30,2:32:48.87:0,49,605	0/0:20,0:20:59.88:0,60,486	0/0:28,0:28:50.84:0,51,566	0/0:24,0:24:59.87:0,60,485	0/0:37,2:39:76.76:0,77,829	0/0:30,0:30:58.41:0,58,615	0/0:29,0:29:74.82:0,75,606	1/1:3,11:14:25.83:247,26,0	1/1:7,11:19:32.89:318,33,0	1/1:7,34:45:79.90:961,80,0	1/1:3,17:22:41.77:412,42,0	0/0:25,0:26:73.95:0,74,597	0/0:28,0:28:37.81:0,38,459	0/0:35,1:36:68.94:0,69,762	0/0:25,0:25:56.91:0,57,468	0/0:32,0:32:89.83:0,90,732	1/1:4,23:28:62.99:654,63,0	0/0:8,0:9:12.58:0,13,183
chr10	78359434	.	GCA	G	1114.39	PASS	AB=0.720;AC=17;AF=0.315;AN=54;BaseQRankSum=1.410;DP=542;FS=2.303;HRun=0;HaplotypeScore=100.5220;InbreedingCoeff=0.6536;MQ=68.17;MQ0=6;MQRankSum=3.696;QD=5.83;ReadPosRankSum=3.519;VQSLOD=3.0673;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,16:37:23.73:228,24,0	0/0:7,0:6:5.99:0,6,63	0/0:28,0:22:3.01:0,3,46	0/0:26,0:18:6.02:0,6,86	0/0:14,0:13:3.01:0,3,37	1/1:6,10:16:14.87:147,15,0	0/1:11,6:18:41.79:127,0,42	1/1:16,0:18:2.99:17,3,0	1/1:12,0:18:11.36:56,11,0	0/0:24,0:22:30.79:0,31,347	0/0:11,0:9:2.98:0,3,21	0/0:14,0:18:3:0,3,26	0/0:10,0:10:6.01:0,6,62	1/1:11,8:20:11.66:114,12,0	./.	1/1:10,0:18:14.19:70,14,0	1/1:10,8:21:16.09:290,16,0	0/0:13,0:16:20.94:0,21,209	0/0:18,0:18:8.92:0,9,62	0/0:10,0:16:5.34:0,5,51	0/0:15,0:15:9:0,9,92	0/0:19,0:19:6.01:0,6,67	0/0:15,0:15:12.01:0,12,114	0/0:42,0:41:18.01:0,18,173	1/1:13,9:22:24.37:248,24,0	0/0:24,0:29:41.76:0,42,397	0/0:21,0:21:17.94:0,18,167	0/0:7,0:7:14.92:0,15,126
chr10	78362158	.	TTC	T	148.50	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=-2.324;DP=568;FS=2.144;HRun=0;HaplotypeScore=123.0021;InbreedingCoeff=0.3773;MQ=58.90;MQ0=14;MQRankSum=2.664;QD=1.35;ReadPosRankSum=2.127;VQSLOD=2.5136;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:17.76:0,18,118	0/0:9,0:9:18.27:0,18,122	1/1:20,0:14:2.94:18,3,0	0/0:33,0:20:1.11:0,1,63	0/0:34,0:34:4.90:0,5,173	1/1:22,0:22:14.97:121,15,0	1/1:6,9:14:2.86:15,3,0	0/0:31,0:30:33.32:0,33,256	0/0:18,0:18:11.49:0,11,71	0/0:30,0:30:65.14:0,65,473	0/0:24,0:24:20.96:0,21,172	0/1:13,0:13:28.14:30,0,28	0/1:18,0:17:2.29:2,0,43	0/0:20,0:19:8.89:0,9,62	0/0:18,0:17:13.49:0,13,96	0/0:13,0:13:14.72:0,15,98	0/0:13,0:11:13.04:0,13,77	0/0:13,0:13:11.97:0,12,113	0/0:21,0:19:21.30:0,21,139	0/0:34,0:33:11.95:0,12,95	./.	0/0:8,0:8:10.23:0,10,77	0/1:22,0:22:91.49:91,0,156	0/0:12,0:12:13.14:0,13,89	0/0:31,0:29:29.95:0,30,253	0/0:29,0:26:26.46:0,26,154	0/0:18,0:18:9.76:0,10,61	0/0:7,0:7:8.96:0,9,69
chr10	78362189	.	TCACACACACACACA	T	2787.50	PASS	AB=0.852;AC=30;AF=0.652;AN=46;BaseQRankSum=3.467;DP=479;FS=11.989;HRun=0;HaplotypeScore=179.1085;InbreedingCoeff=0.1970;MQ=36.96;MQ0=28;MQRankSum=-0.693;QD=9.71;ReadPosRankSum=1.495;VQSLOD=1.3818;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:7.74:0,8,119	1/1:7,0:11:5.18:194,5,0	./.	./.	1/1:25,0:35:3.01:98,3,0	./.	0/0:19,0:15:1.77:0,2,4	0/0:20,0:18:15.05:0,15,398	0/1:9,1:13:20.25:106,0,20	1/1:18,0:25:12.04:392,12,0	./.	1/1:6,3:8:5.28:232,5,0	1/1:8,5:12:15.05:502,15,0	./.	1/1:9,0:13:3.01:98,3,0	1/1:5,1:10:6.02:192,6,0	1/1:8,3:9:3.01:108,3,0	0/1:12,0:11:77.42:77,0,199	1/1:10,0:10:6.02:128,6,0	0/1:14,0:20:14.03:14,0,16	0/0:9,0:8:2.13:0,2,6	1/1:9,9:19:2.04:114,2,0	0/0:22,11:33:0:0,0,0	1/1:7,3:9:2.66:118,3,0	1/1:22,2:32:4.56:112,5,0	0/1:22,0:20:32.85:33,0,221	1/1:7,0:11:12.04:405,12,0	0/0:3,0:3:3.01:0,3,70
chr10	78362857	.	TC	T	4193.23	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=5.171;DP=453;FS=3.090;HRun=9;HaplotypeScore=56.8940;InbreedingCoeff=0.9453;MQ=74.19;MQ0=0;MQRankSum=-1.137;QD=17.84;ReadPosRankSum=5.115;VQSLOD=3.8389;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,1:24:26.67:0,27,547	1/1:2,10:12:21.01:192,21,0	0/0:20,0:18:0.40:0,0,255	0/0:15,0:14:17.33:0,17,275	1/1:2,12:14:32.96:293,33,0	0/0:18,0:18:42.11:0,42,475	0/0:37,0:37:96.71:0,97,1075	0/0:22,0:22:15.50:0,15,157	0/0:11,0:11:30.09:0,30,342	1/1:6,10:16:26.93:246,27,0	1/1:0,14:14:36.02:330,36,0	1/1:4,13:17:35.98:323,36,0	1/1:0,12:12:30.02:274,30,0	0/0:23,0:23:63.17:0,63,716	1/1:6,17:23:41.72:372,42,0	0/0:14,0:14:30.08:0,30,337	0/0:18,0:18:42.11:0,42,475	1/1:0,5:5:9:82,9,0	1/1:6,6:12:23.87:218,24,0	1/1:6,6:12:21.01:191,21,0	1/1:4,17:21:33.48:303,33,0	1/1:4,8:12:18.01:164,18,0	1/1:1,6:7:15.01:137,15,0	1/1:0,15:15:33.02:302,33,0	0/0:16,0:16:42.11:0,42,476	1/1:3,10:13:30.01:273,30,0	1/1:7,12:19:36.01:328,36,0	1/1:1,10:11:18.01:165,18,0
chr10	78364444	.	CGTGT	C	1659.82	PASS	AB=0.824;AC=32;AF=0.640;AN=50;BaseQRankSum=2.635;DP=568;FS=0.000;HRun=0;HaplotypeScore=122.9994;InbreedingCoeff=0.4091;MQ=67.75;MQ0=9;MQRankSum=-3.186;QD=4.91;ReadPosRankSum=1.131;VQSLOD=2.4283;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:40:21.04:0,21,389	1/1:6,0:8:3:28,3,0	./.	./.	1/1:13,0:18:5.50:37,5,0	0/0:27,1:29:24.08:0,24,456	0/0:17,0:22:23.76:0,24,461	0/0:22,0:22:0.47:0,0,1	1/1:12,2:14:15.05:228,15,0	1/1:30,0:31:6.01:56,6,0	1/1:5,0:14:2.98:28,3,0	0/0:18,0:19:2.74:0,3,12	0/1:12,1:20:35.93:36,0,41	0/1:12,4:16:5.27:40,0,5	1/1:9,0:16:9.01:84,9,0	1/1:8,7:15:15.05:231,15,0	1/1:16,9:24:15.05:231,15,0	0/1:17,1:18:35.36:50,0,35	1/1:16,0:21:12.01:111,12,0	1/1:12,0:19:14.05:118,14,0	1/1:30,0:29:2.49:7,2,0	0/0:18,0:18:8.30:0,8,41	0/0:8,0:9:2.74:0,3,12	0/1:16,1:20:29.29:29,0,48	1/1:8,12:21:18.06:277,18,0	./.	1/1:11,0:17:11.70:111,12,0	1/1:10,2:13:9.02:120,9,0
chr10	78364901	.	C	CTGTT	23936.21	PASS	AB=0.523;AC=33;AF=0.589;AN=56;BaseQRankSum=-13.286;DP=541;FS=4.707;HRun=0;HaplotypeScore=79.8723;InbreedingCoeff=0.9225;MQ=80.13;MQ0=0;MQRankSum=-5.060;QD=68.39;ReadPosRankSum=5.918;VQSLOD=7.1756;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.14:0,63,1161	1/1:1,2:3:9.03:256,9,0	0/0:16,0:16:36.03:0,36,505	0/0:16,0:16:29.96:0,30,476	1/1:2,23:25:66.16:1795,66,0	0/0:18,0:18:54.16:0,54,1055	0/0:15,0:15:42.10:0,42,764	0/0:26,0:26:78.23:0,78,1454	0/0:16,0:16:48.14:0,48,930	1/1:2,29:33:99:2444,99,0	1/1:1,15:16:45.11:1229,45,0	0/1:2,19:23:11.68:1325,0,12	1/1:1,24:25:66.08:1842,66,0	0/0:13,0:13:39.12:0,39,778	1/1:0,28:30:72.25:2080,72,0	0/0:13,0:13:39.12:0,39,778	0/0:15,0:15:42.13:0,42,819	1/1:1,21:23:54.19:1507,54,0	1/1:4,14:18:48.15:1269,48,0	1/1:1,17:21:48.11:1319,48,0	1/1:1,13:15:29.99:733,30,0	1/1:0,18:19:51.02:1331,51,0	1/1:1,16:17:48.16:1386,48,0	1/1:2,13:15:33.11:953,33,0	0/0:20,0:20:60.17:0,60,1172	1/1:2,27:29:84.23:2277,84,0	1/1:0,18:20:42.04:1194,42,0	1/1:2,13:17:39.07:997,39,0
chr10	78365263	.	ATATG	A	1329.09	PASS	AB=1.000;AC=32;AF=0.615;AN=52;BaseQRankSum=4.306;DP=195;FS=1.443;HRun=0;HaplotypeScore=43.9084;InbreedingCoeff=0.4304;MQ=77.49;MQ0=4;MQRankSum=-0.240;QD=8.98;ReadPosRankSum=0.620;VQSLOD=2.0676;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:20.99:0,21,334	1/1:2,0:2:2.80:13,3,0	0/1:13,0:4:0.95:4,0,1	0/1:23,0:14:7.62:8,0,52	1/1:5,0:5:5.24:21,5,0	0/0:8,0:8:24.05:0,24,457	0/0:2,0:2:6:0,6,71	0/1:30,0:30:45.25:45,0,497	0/0:1,0:1:3.01:0,3,32	0/1:6,0:6:15.95:37,0,16	1/1:2,0:2:0.47:1,0,0	1/1:1,0:1:2.80:13,3,0	1/1:6,0:6:8.23:36,8,0	0/0:2,0:2:5.97:0,6,43	1/1:2,0:2:2.74:12,3,0	0/0:4,0:4:8.99:0,9,96	0/0:18,0:17:35.86:0,36,334	1/1:11,0:11:5.42:23,5,0	1/1:0,9:9:26.99:315,27,0	1/1:0,3:3:3.01:56,3,0	./.	./.	1/1:3,0:3:2.64:13,3,0	1/1:3,0:3:8.98:72,9,0	0/0:1,0:1:2.98:0,3,22	1/1:1,7:8:24.02:301,24,0	1/1:3,7:10:12.01:183,12,0	1/1:1,10:11:18.06:340,18,0
chr10	78365265	.	ATG	A	1466.55	PASS	AB=1.000;AC=42;AF=0.808;AN=52;BaseQRankSum=6.875;DP=196;FS=1.546;HRun=0;HaplotypeScore=38.3393;InbreedingCoeff=0.2616;MQ=77.34;MQ0=4;MQRankSum=0.693;QD=8.38;ReadPosRankSum=2.776;VQSLOD=2.8526;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:6.92:0,7,230	1/1:0,2:2:3.01:46,3,0	1/1:12,0:4:2.17:12,2,0	0/1:24,0:14:5.41:5,0,50	1/1:0,5:5:6.02:91,6,0	0/0:8,0:8:23.91:0,24,301	0/0:2,0:2:5.98:0,6,47	0/1:30,0:30:84.52:85,0,329	1/1:1,0:1:0.47:1,0,0	1/1:1,5:6:5.94:110,6,0	1/1:0,3:3:3.01:36,3,0	1/1:1,0:1:3.01:46,3,0	1/1:0,6:6:9.03:137,9,0	1/1:2,0:2:5.42:23,5,0	1/1:0,2:2:3.01:46,3,0	0/1:4,0:4:2.31:2,0,41	0/1:18,0:17:50.19:75,0,50	1/1:0,11:11:6.02:91,6,0	1/1:9,0:9:26.92:214,27,0	1/1:3,0:3:2.99:23,3,0	./.	./.	1/1:0,3:3:3.01:46,3,0	1/1:4,0:4:11.97:96,12,0	1/1:1,0:1:2.74:12,3,0	1/1:8,0:8:23.91:187,24,0	1/1:9,0:9:11.93:88,12,0	1/1:10,0:10:17.93:138,18,0
chr10	78365267	.	GTA	G	1267.13	PASS	AB=0.891;AC=40;AF=0.833;AN=48;BaseQRankSum=4.163;DP=199;FS=3.889;HRun=0;HaplotypeScore=39.6996;InbreedingCoeff=0.0336;MQ=77.24;MQ0=4;MQRankSum=1.129;QD=7.97;ReadPosRankSum=2.799;VQSLOD=2.5639;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:9:14.93:15,0,228	1/1:2,0:2:2.98:21,3,0	1/1:13,0:4:2.60:10,3,0	0/0:23,0:14:0.47:0,0,2	1/1:5,0:5:5.96:42,6,0	0/0:8,0:8:17.89:0,18,232	./.	1/1:15,14:30:39.93:414,40,0	1/1:1,0:1:3:25,3,0	0/1:7,0:7:31.16:31,0,46	1/1:3,0:3:2.96:19,3,0	1/1:1,0:1:2.98:21,3,0	0/1:7,0:7:11.68:50,0,12	1/1:0,2:2:6.02:72,6,0	1/1:2,0:2:2.98:21,3,0	1/1:2,2:4:3.01:36,3,0	0/1:4,14:17:14.89:312,0,15	1/1:11,0:11:5.96:42,6,0	1/1:9,0:9:8.03:33,8,0	1/1:3,0:3:2.68:11,3,0	./.	./.	1/1:3,0:3:2.98:21,3,0	./.	1/1:0,2:2:3.01:36,3,0	1/1:8,0:8:10.53:43,11,0	1/1:9,0:9:10.85:47,11,0	1/1:10,0:10:16.07:67,16,0
chr10	78365523	.	TGAACAACTGGAAGGGAA	T	6208.19	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.006;DP=556;FS=1.200;HRun=0;HaplotypeScore=242.6252;InbreedingCoeff=0.9940;MQ=85.24;MQ0=0;MQRankSum=-9.893;QD=87.44;ReadPosRankSum=0.770;VQSLOD=4.0947;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,7335	0/0:5,0:5:15.05:0,15,1077	0/0:24,0:24:63.21:0,63,3291	0/0:14,0:14:39.05:0,39,2009	0/0:22,0:22:66.19:0,66,4345	0/0:19,0:19:57.17:0,57,4283	0/0:11,0:11:33.11:0,33,2749	0/0:23,0:23:66.23:0,66,4252	0/0:23,0:23:69.22:0,69,5407	0/0:27,0:27:81.28:0,81,6283	0/0:18,0:18:54.19:0,54,4205	0/0:23,0:23:69.24:0,69,5522	0/0:26,0:26:78.27:0,78,5968	0/0:20,0:20:60.21:0,60,4350	0/0:34,0:34:99:0,99,7701	0/0:17,0:17:48.15:0,48,3575	0/0:23,0:23:66.20:0,66,4593	0/0:20,0:20:60.21:0,60,4586	1/1:0,14:14:42.14:1567,42,0	1/1:1,14:15:36.09:1647,36,0	1/1:2,20:22:21.07:926,21,0	0/0:15,0:15:45.15:0,45,3619	0/0:14,0:14:42.14:0,42,3382	0/0:27,0:27:81.28:0,81,6133	0/0:15,0:15:45.15:0,45,3508	0/0:22,0:22:57.20:0,57,4689	1/1:0,20:20:42.14:2069,42,0	0/0:9,0:9:27.08:0,27,2025
chr10	78368606	.	G	GAAATC	32182.98	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-12.332;DP=729;FS=12.979;HRun=0;HaplotypeScore=120.2765;InbreedingCoeff=0.9983;MQ=87.30;MQ0=0;MQRankSum=-9.979;QD=80.86;ReadPosRankSum=1.445;VQSLOD=6.4520;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,2609	1/1:1,10:12:33.11:1020,33,0	0/0:31,0:31:77.47:0,77,1745	0/0:25,0:26:19.60:0,20,1153	1/1:7,26:35:87.25:2468,87,0	0/0:33,0:33:93.30:0,93,1998	0/0:28,0:28:84.29:0,84,1872	0/0:34,0:34:99:0,99,2144	0/0:28,0:28:81.28:0,81,1806	1/1:5,22:29:84.29:2509,84,0	1/1:4,17:22:60.16:1796,60,0	1/1:2,25:29:72.25:2324,72,0	1/1:4,19:24:60.21:1937,60,0	0/0:24,0:24:69.22:0,69,1496	1/1:1,19:22:60.21:1933,60,0	0/0:32,0:32:93.31:0,93,2003	0/0:22,0:22:66.23:0,66,1456	1/1:2,7:9:21.07:667,21,0	1/1:3,15:21:60.21:1775,60,0	1/1:6,24:32:90.31:2753,90,0	1/1:2,25:28:66.23:2047,66,0	1/1:1,15:17:42.14:1348,42,0	1/1:3,27:32:81.10:2487,81,0	1/1:2,8:10:24.08:765,24,0	0/0:33,0:33:96.33:0,96,2124	1/1:5,20:28:81.28:2484,81,0	1/1:3,27:34:81.28:2613,81,0	1/1:1,12:13:39.13:1256,39,0
chr10	78369349	.	AACACACAC	A	1869.32	PASS	AB=0.788;AC=9;AF=0.167;AN=54;BaseQRankSum=1.394;DP=544;FS=0.000;HRun=0;HaplotypeScore=150.0277;InbreedingCoeff=0.4195;MQ=63.39;MQ0=2;MQRankSum=-4.013;QD=17.47;ReadPosRankSum=0.829;VQSLOD=2.9586;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:39.12:0,39,1206	1/1:4,2:8:15.05:335,15,0	0/0:17,0:13:3.01:0,3,37	./.	0/1:9,4:15:18.43:337,0,18	0/0:13,0:20:9.03:0,9,241	0/0:24,0:32:15.05:0,15,431	0/0:15,0:15:3:0,3,27	0/0:25,0:23:16.44:0,16,478	1/1:7,5:13:18.04:313,18,0	1/1:8,9:17:15.05:313,15,0	0/0:16,0:24:22.49:0,22,675	0/0:16,0:30:23.88:0,24,746	0/0:12,0:11:0.47:0,0,1	0/1:12,14:26:19.16:710,0,19	0/0:21,0:20:21.07:0,21,466	0/0:17,0:17:24.08:0,24,593	0/0:9,0:17:10.59:0,11,333	0/0:19,0:19:12.04:0,12,348	0/0:14,0:19:6.02:0,6,207	0/0:8,0:12:6.02:0,6,221	0/0:20,0:20:8.74:0,9,251	0/0:14,0:14:5.55:0,6,192	0/0:17,0:33:18.02:0,18,457	0/0:29,0:29:21.07:0,21,586	0/1:19,0:28:8.67:9,0,1747	0/0:16,0:18:24.06:0,24,718	0/0:1,0:1:3.01:0,3,77
chr10	78374378	.	C	CGT	852.13	PASS	AB=1.000;AC=36;AF=0.720;AN=50;BaseQRankSum=7.194;DP=398;FS=5.382;HRun=0;HaplotypeScore=122.7362;InbreedingCoeff=0.4380;MQ=43.96;MQ0=8;MQRankSum=-8.206;QD=3.09;ReadPosRankSum=-1.744;VQSLOD=1.8417;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:74.93:0,75,922	1/1:14,0:14:1.64:102,2,0	./.	0/0:3,0:3:3.11:0,3,9	0/1:17,0:14:0:1,0,0	0/0:19,0:19:38.93:0,39,434	0/0:31,0:30:59.52:0,60,711	1/1:14,0:12:7.46:33,7,0	1/1:6,0:6:6.01:62,6,0	1/1:15,0:15:34.34:214,34,0	1/1:13,0:13:8.01:41,8,0	1/1:16,0:16:8.75:63,9,0	1/1:16,0:16:10.48:75,10,0	1/1:12,0:12:8.23:36,8,0	0/1:13,0:12:0:0,0,0	0/1:5,0:5:0:0,0,0	0/1:11,0:10:0.97:14,0,1	1/1:3,10:13:11.94:111,12,0	0/1:9,0:8:4.65:21,0,5	1/1:19,0:18:2.74:12,3,0	./.	1/1:23,0:22:16.72:83,17,0	1/1:9,0:8:7.01:39,7,0	./.	1/1:19,0:19:1.39:17,1,0	1/1:17,0:15:4.66:26,5,0	1/1:10,0:9:8.12:34,8,0	0/1:5,0:5:8.60:9,0,9
chr10	78374379	.	G	GCACACA	1804.78	PASS	AB=0.944;AC=25;AF=0.500;AN=50;BaseQRankSum=8.525;DP=387;FS=14.640;HRun=0;HaplotypeScore=131.8807;InbreedingCoeff=0.1237;MQ=44.43;MQ0=7;MQRankSum=-7.978;QD=7.99;ReadPosRankSum=-3.031;VQSLOD=1.0431;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:78.25:0,78,1791	0/1:10,4:14:99:158,0,342	./.	0/0:3,0:3:5.98:0,6,47	1/1:16,0:14:0.89:3,1,0	0/0:20,0:20:45.57:0,46,877	0/0:31,0:30:63.13:0,63,1344	0/1:14,0:12:41.27:50,0,41	0/0:6,0:6:5.91:0,6,50	0/1:9,6:15:99:883,0,190	0/0:9,4:13:2.02:0,2,23	0/1:14,0:14:9.26:9,0,92	0/1:15,0:15:4.12:249,0,4	1/1:12,0:12:9.49:103,9,0	1/1:13,0:12:0.47:1,0,0	0/1:5,0:5:0:0,0,0	0/1:11,0:10:12.04:62,0,12	1/1:13,0:13:0.13:11,0,0	0/1:9,0:8:5.87:6,0,294	1/1:17,0:16:2.64:35,3,0	./.	1/1:22,0:21:2.46:136,2,0	1/1:7,2:8:4.74:89,5,0	./.	1/1:18,0:18:9.97:110,10,0	0/0:17,0:15:41.81:0,42,611	0/1:9,0:8:32.53:48,0,33	0/0:5,0:5:12.04:0,12,176
chr10	78374383	.	G	GCACACACACA	3114.75	PASS	AB=0.991;AC=30;AF=0.577;AN=52;BaseQRankSum=7.352;DP=372;FS=13.410;HRun=0;HaplotypeScore=158.3741;InbreedingCoeff=0.2549;MQ=48.58;MQ0=6;MQRankSum=-8.075;QD=13.43;ReadPosRankSum=-1.426;VQSLOD=1.5973;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:81.24:0,81,2331	0/1:14,0:14:99:359,0,101	./.	0/0:4,0:4:8.90:0,9,66	0/1:16,0:14:0.41:0,0,1	0/0:19,0:19:45.62:0,46,1171	0/0:34,0:33:70.15:0,70,1802	0/1:11,0:10:39.46:87,0,39	0/1:5,0:5:9.42:9,0,63	0/1:12,1:13:7.73:1344,0,8	1/1:11,0:11:2.82:38,3,0	0/1:12,0:12:12.21:116,0,12	1/1:4,8:12:7.91:383,8,0	1/1:11,0:11:13.63:185,14,0	1/1:12,0:12:0.47:1,0,0	1/1:5,0:5:1.36:3,1,0	1/1:10,0:9:5.58:251,6,0	0/1:13,0:13:0.30:0,0,10	0/0:12,0:11:4.40:0,4,209	1/1:16,0:15:2.94:18,3,0	0/0:23,0:22:0:0,0,0	1/1:20,0:19:10.62:31,11,0	1/1:9,0:8:3.40:156,3,0	./.	1/1:18,0:18:8.89:96,9,0	0/1:15,0:14:99:103,0,816	1/1:9,0:8:12.06:90,12,0	0/0:4,0:4:12.04:0,12,281
chr10	78374387	.	G	GCACACACACACACA	10207.98	PASS	AB=0.939;AC=35;AF=0.625;AN=56;BaseQRankSum=6.190;DP=471;FS=2.679;HRun=0;HaplotypeScore=225.6738;InbreedingCoeff=0.4124;MQ=51.11;MQ0=3;MQRankSum=-9.431;QD=28.92;ReadPosRankSum=-1.661;VQSLOD=3.7860;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:76.16:0,76,2470	1/1:16,0:16:12.04:573,12,0	0/0:4,0:4:6:0,6,69	0/0:5,0:5:11.07:0,11,138	0/1:13,7:18:0.50:1,0,0	0/0:18,0:18:43.86:0,44,1489	0/0:33,0:33:68.07:0,68,2357	1/1:26,0:24:49.43:2077,49,0	0/1:8,0:8:23.89:238,0,24	1/1:18,2:20:60.17:2961,60,0	1/1:13,0:13:3.32:25,3,0	1/1:9,5:14:3.40:213,3,0	1/1:20,0:20:21.03:796,21,0	1/1:19,1:20:6.24:251,6,0	1/1:15,8:23:0.17:1,0,0	1/1:12,0:12:5.99:138,6,0	1/1:19,0:19:32.76:2018,33,0	0/1:15,0:15:32.33:32,0,34	0/1:12,0:11:65.38:120,0,65	0/1:15,0:14:0:0,0,0	0/0:21,0:20:0.47:0,0,1	1/1:9,11:21:1.48:4,1,0	1/1:9,2:11:6.92:255,7,0	0/1:12,2:15:0:0,0,0	1/1:26,0:26:4.41:57,4,0	0/1:18,0:17:99:159,0,1251	1/1:9,0:8:14.05:291,14,0	0/0:4,0:4:12.04:0,12,394
chr10	78374390	.	C	CACACGT	6509.19	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=7.142;DP=450;FS=0.528;HRun=0;HaplotypeScore=188.6534;InbreedingCoeff=0.5979;MQ=58.00;MQ0=2;MQRankSum=-7.093;QD=18.87;ReadPosRankSum=-4.058;VQSLOD=3.4088;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:75.06:0,75,1534	1/1:8,0:8:12.03:264,12,0	0/0:6,0:6:2.19:0,2,113	0/1:7,0:7:20.36:20,0,99	0/1:15,0:14:0:1,0,0	0/0:18,0:18:39.04:0,39,888	0/0:28,0:28:69.09:0,69,1568	1/1:25,0:23:68.54:1213,69,0	0/1:9,0:9:4.49:101,0,4	1/1:18,0:17:51.18:1509,51,0	1/1:12,0:12:11.99:123,12,0	1/1:12,0:12:8.92:124,9,0	1/1:16,0:16:18.03:396,18,0	1/1:17,0:19:14.37:174,14,0	1/1:20,0:20:0.47:1,0,0	1/1:13,0:13:2.87:56,3,0	1/1:18,0:19:39.12:986,39,0	1/1:15,0:15:15.03:194,15,0	1/1:4,5:12:20.14:490,20,0	1/1:9,0:16:2.93:36,3,0	1/1:23,1:23:5.16:49,5,0	1/1:19,0:19:14.93:150,15,0	1/1:11,0:11:5.98:160,6,0	1/1:14,0:14:3.21:26,3,0	1/1:23,0:26:12.03:134,12,0	0/0:18,0:17:12.98:0,13,338	1/1:4,5:13:15:306,15,0	0/0:4,0:4:12:0,12,105
chr10	78376263	.	CACAT	C	1595.03	PASS	AB=0.952;AC=31;AF=0.646;AN=48;BaseQRankSum=1.745;DP=327;FS=9.683;HRun=0;HaplotypeScore=85.9752;InbreedingCoeff=0.2750;MQ=38.42;MQ0=82;MQRankSum=0.662;QD=5.60;ReadPosRankSum=0.471;VQSLOD=1.2165;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:24:56.39:56,0,78	1/1:3,0:3:8.97:71,9,0	./.	./.	1/1:20,0:18:11.97:96,12,0	0/1:19,1:16:6.09:112,0,6	0/1:18,12:23:16.09:16,0,41	0/0:6,0:1:2.97:0,3,20	./.	1/1:10,0:6:14.87:110,15,0	1/1:11,0:10:11.96:96,12,0	1/1:24,0:20:41.08:301,41,0	1/1:13,0:12:26.40:190,26,0	0/0:3,0:1:2.92:0,3,17	1/1:23,0:20:34.22:261,34,0	1/1:4,0:2:2.96:19,3,0	0/0:7,0:2:2.68:0,3,11	1/1:14,0:9:3.60:8,4,0	0/1:5,0:3:0:0,0,0	0/1:6,0:3:0:0,0,0	0/0:20,0:6:0.44:0,0,1	1/1:17,0:17:25.55:182,26,0	0/1:11,0:7:34.05:34,0,74	1/1:32,0:25:14.39:152,14,0	./.	1/1:5,0:1:2.98:21,3,0	0/1:8,0:4:0:0,0,0	0/0:3,0:1:2.80:0,3,13
chr10	78376265	.	CAT	C	1809.94	PASS	AB=1.000;AC=31;AF=0.646;AN=48;BaseQRankSum=1.666;DP=331;FS=9.285;HRun=0;HaplotypeScore=76.7388;InbreedingCoeff=0.2938;MQ=38.28;MQ0=82;MQRankSum=1.366;QD=6.31;ReadPosRankSum=0.335;VQSLOD=1.7402;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:24:73.62:76,0,74	1/1:3,0:3:8.97:71,9,0	./.	./.	1/1:19,1:18:14.96:120,15,0	0/1:20,0:16:3.11:118,0,3	0/1:30,0:23:16.09:16,0,41	0/0:6,0:1:2.96:0,3,19	./.	1/1:11,0:7:17.90:142,18,0	1/1:11,0:10:11.95:96,12,0	1/1:23,1:20:41.12:298,41,0	1/1:13,0:12:26.73:194,27,0	0/0:3,0:1:2.92:0,3,17	1/1:22,1:20:42.75:334,43,0	1/1:5,0:3:2.96:19,3,0	0/0:7,0:2:2.32:0,2,10	1/1:15,0:10:9.06:46,9,0	0/1:5,0:3:0:0,0,0	0/1:6,0:3:0:0,0,0	0/0:21,0:7:0.44:0,0,1	1/1:16,0:16:25.80:182,26,0	0/1:12,0:8:34.06:34,0,51	1/1:30,1:24:18.32:173,18,0	./.	1/1:5,0:1:2.98:21,3,0	0/1:8,0:4:0:0,0,0	0/0:3,0:1:2.80:0,3,13
chr10	78376323	.	T	TA	19299.95	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-5.422;DP=657;FS=2.271;HRun=2;HaplotypeScore=99.0353;InbreedingCoeff=0.9974;MQ=59.18;MQ0=2;MQRankSum=-2.267;QD=38.29;ReadPosRankSum=5.196;VQSLOD=4.8664;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.19:0,60,739	1/1:0,7:7:18.06:259,18,0	0/0:39,0:32:83.89:0,84,921	0/0:51,0:36:90.22:0,90,1005	1/1:1,17:18:48.09:645,48,0	0/0:17,0:17:51.15:0,51,618	0/0:25,0:25:60.19:0,60,743	1/1:1,24:25:69.22:973,69,0	1/1:1,24:25:69.23:984,69,0	1/1:1,18:19:54.18:769,54,0	1/1:2,21:23:63.21:896,63,0	1/1:0,22:22:57.19:820,57,0	1/1:3,14:17:39.13:561,39,0	1/1:0,24:24:69.23:984,69,0	1/1:0,28:27:78.26:1095,78,0	1/1:0,32:32:93.31:1329,93,0	1/1:0,17:17:51.17:732,51,0	1/1:2,16:18:28.65:618,29,0	1/1:0,18:18:54.16:757,54,0	1/1:3,21:24:60.13:814,60,0	1/1:1,33:34:84.28:1194,84,0	1/1:1,22:23:66.18:927,66,0	1/1:0,14:14:36.12:518,36,0	1/1:0,31:31:75.22:1047,75,0	1/1:0,18:18:51.03:674,51,0	1/1:3,26:29:78.26:1115,78,0	1/1:0,30:29:87.29:1242,87,0	1/1:0,8:8:24.08:345,24,0
chr10	78376694	.	TACACACAC	T	3965.75	PASS	AB=0.905;AC=25;AF=0.446;AN=56;BaseQRankSum=1.704;DP=507;FS=5.299;HRun=0;HaplotypeScore=136.1003;InbreedingCoeff=0.7287;MQ=57.91;MQ0=16;MQRankSum=-1.223;QD=17.17;ReadPosRankSum=2.516;VQSLOD=2.6115;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:30.10:0,30,830	0/0:10,0:10:18.06:0,18,532	0/0:25,0:17:6.01:0,6,88	0/0:20,0:15:6.02:0,6,96	0/0:22,0:22:36.10:0,36,1076	0/0:29,0:28:60.20:0,60,1776	0/0:23,0:22:27.43:0,27,877	1/1:9,0:9:5.17:81,5,0	1/1:18,3:20:39.11:841,39,0	0/0:17,0:16:24.08:0,24,723	0/0:12,0:11:18.04:0,18,510	1/1:25,0:26:12.04:225,12,0	1/1:18,0:19:10.85:176,11,0	1/1:6,3:10:6.02:142,6,0	0/0:22,0:22:29.14:0,29,816	1/1:25,1:25:27.08:605,27,0	1/1:12,6:16:3.01:34,3,0	0/1:3,0:4:65.72:119,0,66	0/0:18,0:18:18.53:0,19,331	0/0:19,0:18:19.40:0,19,249	0/0:23,0:21:24.08:0,24,406	1/1:6,0:15:2.94:18,3,0	0/1:22,0:22:0:0,0,0	0/1:15,0:15:0:0,0,0	1/1:15,1:17:27.07:582,27,0	1/1:6,12:20:45.15:1072,45,0	0/0:15,0:14:34:0,34,568	1/1:3,4:5:3.01:71,3,0
chr10	78376712	.	CACACACACACACACACAGAGAGAGAGAGAGAGAGAGAGAG	C	2382.10	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=6.099;DP=518;FS=2.357;HRun=0;HaplotypeScore=353.4927;InbreedingCoeff=0.6037;MQ=45.40;MQ0=24;MQRankSum=-4.070;QD=21.27;ReadPosRankSum=1.751;VQSLOD=1.2548;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:43:0,43,3897	0/0:9,0:9:21.91:0,22,1410	0/0:12,0:6:12.04:0,12,343	0/0:10,0:6:18.06:0,18,623	0/0:25,0:25:51.17:0,51,4661	0/0:26,0:25:60.21:0,60,4765	0/0:23,0:21:33.68:0,34,1970	0/0:18,0:16:39.34:0,39,753	0/0:24,0:23:33.32:0,33,405	0/0:19,0:18:51.16:0,51,3479	0/0:17,0:16:21.06:0,21,1568	1/1:8,16:24:11.60:1056,12,0	1/1:6,13:18:12.04:989,12,0	0/1:14,0:14:50.50:51,0,184	0/0:19,0:19:40.37:0,40,3034	0/0:26,0:23:32.25:0,32,757	0/0:13,0:12:15.03:0,15,458	0/1:5,0:4:99:115,0,577	0/0:21,0:19:53.88:0,54,3197	0/0:22,0:20:30.99:0,31,1571	0/0:20,0:18:28.58:0,29,1743	1/1:15,0:14:3.01:87,3,0	1/1:2,18:20:2.74:231,3,0	1/1:7,8:15:0.89:2,1,0	0/0:23,0:23:29.90:0,30,736	0/0:22,0:20:47.82:0,48,2180	0/0:22,0:21:51.63:0,52,3783	0/0:8,0:6:7.56:0,8,187
chr10	78376728	.	CAGAGAGAGAGAG	C	744.60	PASS	AB=1.000;AC=15;AF=0.300;AN=50;BaseQRankSum=4.854;DP=482;FS=10.569;HRun=0;HaplotypeScore=149.6316;InbreedingCoeff=0.5802;MQ=43.18;MQ0=22;MQRankSum=-4.175;QD=5.40;ReadPosRankSum=0.159;VQSLOD=2.2694;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:21.54:0,22,785	0/0:7,0:7:3.01:0,3,114	./.	./.	0/0:23,0:22:21.07:0,21,688	0/0:28,0:27:15.05:0,15,381	0/0:22,0:19:1.35:0,1,3	0/0:17,0:15:0:0,0,0	1/1:17,0:18:2.08:82,2,0	0/0:17,0:16:18.06:0,18,593	0/0:20,0:19:6.02:0,6,226	1/1:20,0:20:9.03:249,9,0	1/1:19,0:18:9.03:243,9,0	1/1:7,6:13:3.01:99,3,0	0/0:19,0:19:15.26:0,15,312	1/1:16,3:17:3:38,3,0	1/1:13,1:11:2.99:100,3,0	0/0:7,0:7:7.29:0,7,166	0/0:23,0:21:22.31:0,22,476	0/0:18,0:17:0:0,0,1	0/0:21,0:18:6.02:0,6,154	./.	1/1:19,0:19:3.01:72,3,0	0/1:14,0:14:0:0,0,0	0/0:16,4:22:1.25:0,1,3	0/0:21,0:19:17.04:0,17,201	0/0:21,0:20:15.05:0,15,419	0/0:10,0:7:7.25:0,7,73
chr10	78377211	.	ATAAATGAATC	A	4133.15	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.147;DP=596;FS=0.000;HRun=0;HaplotypeScore=178.0564;InbreedingCoeff=0.9946;MQ=82.87;MQ0=0;MQRankSum=-10.557;QD=71.26;ReadPosRankSum=2.910;VQSLOD=3.6715;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.23:0,72,3573	0/0:12,0:12:30.10:0,30,1381	0/0:20,0:20:60.21:0,60,2496	0/0:25,0:25:56.98:0,57,2327	0/0:26,0:26:69.23:0,69,3308	0/0:27,0:27:75.26:0,75,3799	0/0:18,0:18:54.19:0,54,2732	0/0:29,0:29:75.26:0,75,3574	0/0:19,0:19:51.16:0,51,2465	0/0:28,0:28:75.26:0,75,3386	0/0:20,0:20:60.19:0,60,2996	0/0:25,0:25:75.26:0,75,3848	0/0:36,0:36:99:0,108,5434	0/0:30,0:30:90.31:0,90,4625	0/0:17,0:17:51.15:0,51,2410	0/0:27,0:27:75.26:0,75,3814	0/0:26,0:26:72.22:0,72,3533	0/0:14,0:14:39.13:0,39,1951	1/1:2,6:8:18.06:587,18,0	1/1:3,8:11:23.95:513,24,0	1/1:2,8:10:18.06:587,18,0	0/0:19,0:19:57.20:0,57,2847	0/0:18,0:18:48.16:0,48,2527	0/0:20,0:20:54.18:0,54,2594	0/0:14,0:14:39.13:0,39,1953	0/0:33,0:33:96.32:0,96,4662	1/1:3,26:29:75.26:2446,75,0	0/0:10,0:10:30.10:0,30,1580
chr10	78377949	.	ATGGTTGTC	A	26158.04	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=12.896;DP=582;FS=4.806;HRun=0;HaplotypeScore=174.4818;InbreedingCoeff=0.9887;MQ=81.74;MQ0=0;MQRankSum=-15.437;QD=57.24;ReadPosRankSum=3.382;VQSLOD=4.8168;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.25:0,78,3178	1/1:0,8:8:24.08:663,24,0	0/0:28,0:28:75.24:0,75,2768	0/0:20,0:20:57.20:0,57,2299	1/1:3,18:21:35.97:891,36,0	0/0:17,0:17:51.17:0,51,2023	0/0:33,0:33:90.31:0,90,3698	1/1:5,16:21:45.13:1154,45,0	1/1:4,25:29:66.23:1777,66,0	1/1:1,15:16:42.14:1117,42,0	1/1:0,9:9:18.06:503,18,0	1/1:7,32:39:78.27:2181,78,0	1/1:5,25:30:65.97:1845,66,0	1/1:3,23:26:54.19:1494,54,0	1/1:1,22:23:57.20:1594,57,0	1/1:3,13:16:24.08:671,24,0	1/1:5,21:26:45.15:1208,45,0	1/1:4,15:19:36.12:1007,36,0	1/1:0,19:19:57.19:1467,57,0	1/1:2,12:14:33.11:891,33,0	1/1:4,28:32:42.11:1008,42,0	1/1:1,13:14:36.12:1007,36,0	1/1:3,11:14:27.09:744,27,0	1/1:4,15:19:20.99:527,21,0	1/1:2,12:14:36.12:976,36,0	1/1:0,21:21:63.20:1675,63,0	1/1:2,20:22:51.02:1425,51,0	1/1:1,4:5:12.04:336,12,0
chr10	78378954	.	GT	G	11444.03	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=10.191;DP=566;FS=1.137;HRun=9;HaplotypeScore=137.9880;InbreedingCoeff=0.9369;MQ=62.42;MQ0=1;MQRankSum=-2.631;QD=22.84;ReadPosRankSum=2.123;VQSLOD=3.4463;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.14:0,60,664	1/1:5,9:14:26.99:247,27,0	0/0:4,0:4:8.99:0,9,82	0/0:9,0:8:12.01:0,12,122	1/1:4,22:26:66.02:603,66,0	0/0:18,1:19:19.26:0,19,460	0/0:13,0:13:30.06:0,30,327	1/1:12,27:38:89.86:811,90,0	1/1:3,22:25:72:651,72,0	1/1:1,16:17:48.01:434,48,0	1/1:7,17:24:56.96:519,57,0	1/1:0,19:19:48.03:439,48,0	1/1:3,22:25:66.02:604,66,0	1/1:3,27:30:77.98:704,78,0	1/1:5,24:29:71.97:659,72,0	1/1:2,25:27:75.04:686,75,0	1/1:7,24:31:68.83:606,69,0	1/1:2,12:14:36.02:329,36,0	1/1:4,18:22:56.09:516,56,0	1/1:5,21:26:65.97:599,66,0	1/1:2,9:11:24:220,24,0	1/1:4,10:14:35.72:308,36,0	1/1:2,10:12:33.02:302,33,0	1/1:0,16:16:45.02:411,45,0	1/1:2,26:28:71.94:644,72,0	1/1:4,14:18:42:384,42,0	1/1:5,28:33:80.99:741,81,0	1/1:0,1:1:3:27,3,0
chr10	78379017	.	C	CA	7399.68	PASS	AB=0.842;AC=36;AF=0.643;AN=56;BaseQRankSum=-5.354;DP=627;FS=15.097;HRun=11;HaplotypeScore=117.2589;InbreedingCoeff=0.8438;MQ=69.51;MQ0=0;MQRankSum=-1.736;QD=16.89;ReadPosRankSum=-2.884;VQSLOD=3.5472;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,1:20:23.35:0,23,364	0/0:0,0:13:22.19:0,22,64	0/0:12,0:13:16.81:0,17,106	0/1:10,0:9:10.06:10,0,35	0/0:3,0:26:39.55:0,40,114	0/0:16,0:17:37.87:0,38,284	0/0:24,0:24:62.70:0,63,485	1/1:10,15:25:15.82:331,16,0	1/1:15,12:29:62.08:626,62,0	0/0:5,0:17:27.41:0,27,93	0/0:3,0:32:49.76:0,50,151	1/1:11,0:17:31.45:158,31,0	1/1:14,4:29:62.87:389,63,0	0/1:14,12:26:21.62:348,0,22	0/0:4,0:27:45.68:0,46,132	1/1:9,15:26:65.78:627,66,0	1/1:8,25:33:48.91:677,49,0	1/1:8,12:20:21.81:392,22,0	1/1:7,9:17:35.89:343,36,0	1/1:14,16:31:68.90:648,69,0	1/1:1,9:11:23.88:227,24,0	1/1:5,1:26:57.07:323,57,0	1/1:7,3:33:64.41:351,64,0	1/1:5,0:12:28.57:154,29,0	1/1:13,19:32:22.65:588,23,0	1/1:10,11:21:41.91:396,42,0	1/1:10,21:31:66.11:658,66,0	1/1:3,5:8:14.61:151,15,0
chr10	78382888	.	T	TA	7072.25	PASS	AB=0.556;AC=25;AF=0.446;AN=56;BaseQRankSum=-1.982;DP=625;FS=1.428;HRun=8;HaplotypeScore=67.4299;InbreedingCoeff=0.9269;MQ=71.88;MQ0=0;MQRankSum=-1.418;QD=26.49;ReadPosRankSum=0.644;VQSLOD=5.5237;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66:0,66,594	0/0:9,0:9:27.01:0,27,247	0/0:21,0:21:47.29:0,47,399	0/0:9,0:9:16.80:0,17,134	0/0:33,0:33:99:0,99,902	0/0:23,0:23:59.98:0,60,534	0/0:23,0:23:69.04:0,69,631	1/1:6,15:21:20.62:457,21,0	1/1:1,13:14:39.11:445,39,0	0/0:28,0:28:72.04:0,72,659	0/0:29,0:29:80.96:0,81,730	0/0:24,0:24:60.02:0,60,549	0/0:27,0:27:72.02:0,72,654	1/1:2,19:21:45.13:518,45,0	0/0:26,0:26:75.03:0,75,683	1/1:3,13:16:36.11:416,36,0	1/1:3,22:25:51.15:589,51,0	1/1:2,13:15:33.10:381,33,0	1/1:1,19:20:57.17:658,57,0	1/1:7,27:34:75.19:850,75,0	0/1:3,12:15:15.81:342,0,16	0/0:27,0:27:47.49:0,47,607	0/0:30,0:30:74.98:0,75,672	0/0:23,0:23:66.02:0,66,599	1/1:1,26:26:66.20:762,66,0	1/1:2,17:19:26.68:549,27,0	1/1:2,30:32:72.21:831,72,0	1/1:0,8:8:24.07:277,24,0
chr10	78384201	.	T	TA	6266.48	PASS	AB=0.867;AC=27;AF=0.482;AN=56;BaseQRankSum=6.970;DP=511;FS=1.191;HRun=9;HaplotypeScore=79.2165;InbreedingCoeff=0.8708;MQ=55.25;MQ0=9;MQRankSum=-3.567;QD=23.38;ReadPosRankSum=-1.157;VQSLOD=5.1318;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:50.97:0,51,439	0/0:10,0:10:20.99:0,21,182	0/0:8,0:3:8.97:0,9,73	0/0:12,0:7:3.92:0,4,117	0/0:21,0:20:47.98:0,48,417	0/1:11,2:13:36.86:37,0,178	0/0:14,0:14:32.91:0,33,278	1/1:3,29:30:87.24:962,87,0	1/1:4,18:21:51.03:535,51,0	0/0:31,0:29:71.94:0,72,618	0/0:19,0:19:53.99:0,54,469	0/0:15,0:15:35.91:0,36,303	0/0:9,0:8:24:0,24,208	1/1:6,17:18:48.09:517,48,0	0/0:20,0:19:47.89:0,48,407	1/1:3,16:19:48.08:516,48,0	1/1:4,16:17:30.08:332,30,0	1/1:4,6:9:14.87:147,15,0	1/1:5,15:19:51.07:535,51,0	1/1:3,19:21:60.08:637,60,0	1/1:2,6:8:18.52:200,19,0	0/0:21,0:20:47.12:0,47,383	0/0:18,0:18:50.97:0,51,439	0/0:18,0:17:32.98:0,33,286	1/1:7,21:26:63.10:680,63,0	1/1:6,21:25:63.17:697,63,0	1/1:7,15:20:19.07:438,19,0	1/1:0,1:1:3.01:33,3,0
chr10	78384372	.	GTT	G	8828.10	PASS	AB=0.900;AC=47;AF=0.839;AN=56;BaseQRankSum=3.720;DP=606;FS=0.000;HRun=12;HaplotypeScore=158.7089;InbreedingCoeff=0.8901;MQ=66.33;MQ0=2;MQRankSum=-0.945;QD=16.63;ReadPosRankSum=5.046;VQSLOD=2.1956;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:20:47.05:0,47,571	1/1:3,0:10:19.05:81,19,0	0/0:21,0:15:25.45:0,25,242	0/1:16,0:8:6.38:6,0,59	1/1:2,0:30:65.25:279,65,0	0/0:20,0:20:20.69:0,21,648	0/0:11,0:11:27.05:0,27,377	1/1:13,30:43:84.03:836,84,0	1/1:7,14:21:47.98:475,48,0	1/1:4,1:27:57.72:269,58,0	1/1:6,0:20:35.64:154,36,0	1/1:3,0:22:48.77:206,49,0	1/1:4,0:23:50.74:222,51,0	1/1:3,10:14:38.81:376,39,0	1/1:2,0:26:57.51:248,58,0	1/1:4,18:23:53.85:530,54,0	1/1:4,30:35:80.86:874,81,0	1/1:2,13:17:41.55:390,42,0	1/1:11,8:19:36.04:360,36,0	1/1:4,18:24:51.46:550,51,0	1/1:1,12:13:30.06:305,30,0	1/1:0,0:16:35.42:151,35,0	1/1:3,0:21:45.14:190,45,0	1/1:1,0:12:27.07:114,27,0	1/1:2,28:30:69.13:694,69,0	1/1:12,18:31:54.68:663,55,0	1/1:4,20:24:59.82:580,60,0	1/1:1,8:9:27.06:273,27,0
chr10	78384459	.	TTCCCTTCCTCCTTCCC	T	11227.61	PASS	AB=0.875;AC=42;AF=0.778;AN=54;BaseQRankSum=4.163;DP=478;FS=1.251;HRun=0;HaplotypeScore=207.1460;InbreedingCoeff=0.6828;MQ=55.17;MQ0=2;MQRankSum=-3.320;QD=29.94;ReadPosRankSum=0.913;VQSLOD=4.1935;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:42.71:0,43,3110	0/1:4,2:5:65.71:249,0,66	0/0:13,0:5:7.19:0,7,155	0/0:24,0:14:9.03:0,9,171	1/1:17,0:14:6.02:167,6,0	0/0:12,0:12:15.05:0,15,505	0/0:23,0:23:42.12:0,42,1686	0/1:28,0:23:49.69:50,0,161	1/1:12,7:18:33.10:955,33,0	1/1:6,4:10:21.07:746,21,0	1/1:15,1:16:9.03:230,9,0	1/1:20,5:25:45.13:1145,45,0	1/1:15,2:17:27.08:652,27,0	1/1:4,7:11:9.03:392,9,0	1/1:18,2:20:20.84:437,21,0	1/1:15,3:18:24.03:682,24,0	1/1:34,1:35:37.78:873,38,0	1/1:13,0:13:20.98:344,21,0	1/1:7,6:12:18.02:412,18,0	1/1:3,3:6:9.03:358,9,0	1/1:16,0:15:12.04:247,12,0	1/1:12,2:12:15.05:476,15,0	1/1:8,1:9:15.04:360,15,0	1/1:17,1:18:35.95:673,36,0	1/1:23,2:24:36.04:789,36,0	1/1:17,4:21:24.08:762,24,0	1/1:18,0:18:15:229,15,0	./.
chr10	78384603	.	TCTCTAC	T	598.35	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.798;DP=687;FS=2.731;HRun=0;HaplotypeScore=140.3791;InbreedingCoeff=0.9967;MQ=83.17;MQ0=0;MQRankSum=-4.723;QD=37.40;ReadPosRankSum=1.737;VQSLOD=3.7737;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,3814	0/0:13,0:13:30.10:0,30,1056	0/0:22,0:22:60.58:0,61,2032	0/0:25,0:24:62.74:0,63,2049	0/0:25,0:25:60.21:0,60,2103	0/0:14,0:14:42.14:0,42,1484	0/0:42,0:42:99:0,123,4327	0/0:26,0:26:63.22:0,63,2099	0/0:37,0:37:99:0,108,3657	0/0:28,0:28:78.27:0,78,2753	0/0:21,0:21:48.16:0,48,1694	0/0:27,0:27:78.27:0,78,2594	0/0:37,0:37:99:0,108,3775	0/0:30,0:30:87.28:0,87,2919	0/0:41,0:41:99:0,117,3930	0/0:27,0:27:81.28:0,81,2828	0/0:23,0:23:69.24:0,69,2437	1/1:2,14:16:30.10:693,30,0	0/0:20,0:19:54.19:0,54,1856	0/0:21,0:21:57.20:0,57,1956	0/0:18,0:18:54.19:0,54,1873	0/0:16,0:16:48.16:0,48,1671	0/0:19,0:19:54.19:0,54,1907	0/0:28,0:28:75.24:0,75,2506	0/0:13,0:13:33.11:0,33,1165	0/0:22,0:22:63.22:0,63,2171	0/0:28,0:28:81.28:0,81,2775	0/0:8,0:8:24.08:0,24,712
chr10	78386312	.	CAT	C	3176.99	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.926;DP=599;FS=4.977;HRun=0;HaplotypeScore=81.4169;InbreedingCoeff=0.9972;MQ=68.74;MQ0=0;MQRankSum=0.596;QD=40.73;ReadPosRankSum=2.432;VQSLOD=5.5948;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.29:0,84,1580	0/0:15,0:15:42.10:0,42,773	0/0:8,0:8:24.08:0,24,458	0/0:8,0:8:17.40:0,17,261	0/0:32,0:32:96.33:0,96,1854	0/0:27,0:27:78.27:0,78,1499	0/0:16,0:16:48.16:0,48,903	0/0:39,0:39:99:0,111,2035	0/0:18,0:18:51.17:0,51,985	0/0:38,0:38:99:0,114,2135	0/0:19,0:19:54.15:0,54,976	1/1:0,13:13:36.12:551,36,0	1/1:1,18:19:51.17:780,51,0	0/0:24,0:24:69.21:0,69,1297	0/0:29,0:29:84.25:0,84,1510	0/0:24,0:24:72.25:0,72,1359	0/0:11,0:11:33.11:0,33,636	0/0:21,0:21:60.21:0,60,1158	0/0:22,0:22:66.22:0,66,1238	0/0:34,0:34:99:0,102,1923	0/0:19,0:19:51.14:0,51,902	1/1:0,16:16:48.16:735,48,0	1/1:0,17:17:51.17:781,51,0	1/1:1,12:13:33.11:505,33,0	0/0:21,0:21:63.20:0,63,1183	0/0:30,0:30:90.29:0,90,1677	0/0:24,0:24:72.23:0,72,1335	0/0:12,0:12:36.07:0,36,624
chr10	78387514	.	C	CT	7173.58	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-1.602;DP=636;FS=0.000;HRun=0;HaplotypeScore=154.3721;InbreedingCoeff=0.9996;MQ=76.04;MQ0=0;MQRankSum=-5.628;QD=23.44;ReadPosRankSum=1.739;VQSLOD=5.1003;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:98.07:0,98,1146	0/0:11,0:11:26.02:0,26,155	0/0:23,0:22:38.64:0,39,465	0/0:22,0:22:51.27:0,51,552	0/0:21,0:21:48.32:0,48,287	0/0:17,0:17:45.07:0,45,591	0/0:23,0:23:57.94:0,58,674	1/1:16,18:34:80.35:739,80,0	1/1:2,21:23:62.72:555,63,0	0/0:22,0:22:56.21:0,56,384	0/0:16,0:16:43.72:0,44,258	0/0:21,0:21:49.42:0,49,291	0/0:17,0:17:31.21:0,31,183	1/1:6,20:26:77.48:630,77,0	0/0:26,0:26:68.34:0,68,389	1/1:2,32:34:86.11:842,86,0	1/1:5,17:22:59.78:539,60,0	1/1:3,17:20:59.75:538,60,0	1/1:2,13:15:45.07:446,45,0	1/1:4,14:18:47.67:396,48,0	1/1:3,19:22:46.25:431,46,0	0/0:22,0:22:32.02:0,32,197	0/0:18,0:18:31.42:0,31,171	0/0:36,0:36:83.57:0,84,550	1/1:5,21:26:39.63:477,40,0	1/1:6,16:22:56.85:513,57,0	1/1:5,25:31:83.56:744,84,0	1/1:7,6:13:38.90:323,39,0
chr10	78387516	.	C	CCCT	24448.90	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-0.549;DP=657;FS=27.404;HRun=0;HaplotypeScore=120.2396;InbreedingCoeff=0.9973;MQ=74.73;MQ0=0;MQRankSum=-5.046;QD=45.36;ReadPosRankSum=6.936;VQSLOD=3.8759;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:98.03:0,98,1307	1/1:1,8:10:24.08:486,24,0	0/0:22,0:21:44.77:0,45,508	0/0:21,0:21:44.82:0,45,551	1/1:1,20:21:48.09:940,48,0	0/0:16,0:16:45.13:0,45,682	0/0:23,0:23:58:0,58,771	1/1:18,0:36:99:1600,105,0	1/1:3,0:24:63.16:1210,63,0	1/1:2,20:24:57.14:1026,57,0	1/1:0,17:17:45.15:918,45,0	1/1:1,23:24:51.17:1068,51,0	1/1:2,15:20:30.10:622,30,0	1/1:7,0:27:72.07:1256,72,0	1/1:1,26:29:72.24:1496,72,0	1/1:3,0:34:74.90:1813,75,0	1/1:6,0:23:60.18:1116,60,0	1/1:3,0:19:57.15:1053,57,0	1/1:1,0:14:42.12:783,42,0	1/1:6,0:20:54.13:911,54,0	1/1:7,0:24:38.60:909,39,0	1/1:4,18:25:36.10:728,36,0	1/1:0,17:18:35.52:753,36,0	1/1:2,34:38:84.75:1758,85,0	1/1:5,0:26:59.98:1115,60,0	1/1:6,0:22:63.09:1047,63,0	1/1:8,0:31:81.25:1501,81,0	1/1:7,0:13:17.85:342,18,0
chr10	78387875	.	CGTGTGTGTGTGTGTGTGTGTGTGT	C	2322.15	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=6.018;DP=534;FS=5.945;HRun=0;HaplotypeScore=277.5947;InbreedingCoeff=0.5899;MQ=70.70;MQ0=14;MQRankSum=-5.985;QD=22.33;ReadPosRankSum=0.901;VQSLOD=1.9125;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:18.06:0,18,1105	0/0:5,0:3:0.47:0,0,1	./.	0/0:42,0:32:2.81:0,3,37	0/0:12,0:12:15.05:0,15,897	0/0:12,0:12:12.04:0,12,685	0/0:21,0:21:24.55:0,25,1284	0/0:28,0:28:7.41:0,7,47	1/1:18,11:30:10.28:908,10,0	0/0:16,0:16:12.04:0,12,678	0/0:11,0:10:21.07:0,21,823	0/0:24,0:23:30.10:0,30,1111	0/0:5,0:5:6.02:0,6,161	1/1:15,1:16:12.04:727,12,0	0/0:22,0:23:24.08:0,24,1293	1/1:9,4:13:9.03:560,9,0	0/1:30,0:28:62.45:78,0,62	0/0:17,0:17:21.07:0,21,1365	0/0:18,0:18:16.69:0,17,389	0/0:14,0:12:12.47:0,12,620	0/0:36,0:34:24.08:0,24,1702	0/0:13,0:12:6.02:0,6,285	0/0:10,0:10:3.01:0,3,168	0/0:36,0:35:30.08:0,30,784	1/1:14,1:15:4.83:192,5,0	0/0:13,0:13:15.05:0,15,259	0/0:6,0:6:9.03:0,9,398	0/0:10,0:10:6.02:0,6,92
chr10	78390629	.	A	ACCTTAG	11127.33	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-5.689;DP=727;FS=11.026;HRun=0;HaplotypeScore=149.5318;InbreedingCoeff=0.9998;MQ=80.47;MQ0=0;MQRankSum=-16.445;QD=75.18;ReadPosRankSum=0.372;VQSLOD=5.1679;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,3106	0/0:10,0:10:30.10:0,30,704	0/0:25,0:25:69.24:0,69,1543	0/0:26,0:26:69.19:0,69,1381	0/0:35,0:35:96.33:0,96,2227	0/0:22,0:22:54.17:0,54,1201	0/0:26,0:26:75.26:0,75,1771	0/0:33,0:33:87.29:0,87,1977	0/0:29,0:29:81.28:0,81,1914	0/0:20,0:20:57.20:0,57,1345	0/0:21,0:21:57.20:0,57,1343	1/1:2,30:32:90.31:3147,90,0	1/1:7,26:35:93.32:3181,93,0	0/0:32,0:32:93.32:0,93,2175	0/0:27,0:27:75.26:0,75,1748	0/0:24,0:24:69.24:0,69,1606	0/0:40,0:40:99:0,111,2595	1/1:3,10:15:36.12:1281,36,0	0/0:20,0:20:60.21:0,60,1406	0/0:22,0:22:66.23:0,66,1559	0/0:27,0:27:78.27:0,78,1844	1/1:4,11:15:36.12:1006,36,0	1/1:2,16:19:45.12:1277,45,0	1/1:5,21:32:39.24:1235,39,0	0/0:28,0:28:81.28:0,81,1823	0/0:30,0:29:78.27:0,78,1844	0/0:26,0:26:75.26:0,75,1773	0/0:11,0:11:32.69:0,33,660
chr10	78390835	.	TACTATAA	T	3417.87	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.863;DP=506;FS=11.064;HRun=0;HaplotypeScore=113.5579;InbreedingCoeff=0.9934;MQ=74.40;MQ0=0;MQRankSum=-8.116;QD=51.79;ReadPosRankSum=-0.638;VQSLOD=3.0468;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.27:0,78,3057	0/0:7,0:7:21.07:0,21,726	0/0:7,0:7:21.06:0,21,575	0/0:15,0:15:35.25:0,35,1137	0/0:20,0:20:60.18:0,60,2103	0/0:22,0:22:66.21:0,66,2527	0/0:16,0:16:48.15:0,48,1828	0/0:53,0:53:99:0,150,5543	0/0:17,0:17:51.15:0,51,1812	0/0:15,0:15:39.13:0,39,1414	0/0:12,0:12:33.10:0,33,1229	0/0:19,0:19:57.12:0,57,1958	0/0:24,0:24:72.18:0,72,2751	0/0:10,0:10:30.08:0,30,1002	0/0:27,0:27:81.22:0,81,2914	0/0:25,0:25:75.26:0,75,2958	0/0:24,0:24:72.22:0,72,2695	0/0:15,0:15:42.14:0,42,1645	1/1:1,23:23:69.15:1489,69,0	1/1:2,10:12:24:514,24,0	1/1:2,12:14:22.20:388,22,0	0/0:6,0:6:18.03:0,18,527	0/0:13,0:13:39.12:0,39,1409	0/0:20,0:20:57.20:0,57,2301	0/0:14,0:14:42.14:0,42,1609	0/0:23,0:23:66.22:0,66,2481	1/1:0,16:16:39.13:1027,39,0	0/0:9,0:9:27.03:0,27,704
chr10	78390993	.	C	CT	8544.87	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=6.877;DP=377;FS=38.882;HRun=7;HaplotypeScore=75.2089;InbreedingCoeff=0.8901;MQ=66.49;MQ0=1;MQRankSum=-6.980;QD=27.56;ReadPosRankSum=2.410;VQSLOD=2.6101;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:49.40:0,49,514	1/1:0,4:4:12.04:145,12,0	0/0:21,0:17:41.52:0,42,371	0/1:9,0:9:2.17:2,0,73	1/1:1,16:17:51.16:616,51,0	0/0:16,0:16:22.21:0,22,357	0/0:4,0:4:12.02:0,12,116	1/1:11,21:30:72.22:869,72,0	1/1:4,6:10:21.06:251,21,0	1/1:4,20:24:63.19:761,63,0	1/1:1,8:9:24.07:289,24,0	1/1:2,7:9:24.07:290,24,0	1/1:3,11:14:33.10:398,33,0	1/1:3,7:10:27.07:313,27,0	1/1:4,11:15:36.11:434,36,0	1/1:2,11:12:33.10:398,33,0	1/1:2,12:14:39.11:455,39,0	1/1:2,0:15:42.96:216,43,0	1/1:4,9:12:27.08:324,27,0	1/1:2,11:13:33.10:398,33,0	1/1:0,4:4:12.04:145,12,0	1/1:1,8:9:24.07:290,24,0	1/1:3,6:9:21.06:251,21,0	1/1:2,7:8:18.06:217,18,0	1/1:1,22:23:66.20:797,66,0	1/1:6,1:15:32.98:234,33,0	1/1:3,6:9:21.06:253,21,0	1/1:1,3:11:23.74:197,24,0
chr10	78391030	.	CT	C	5258.35	PASS	AB=0.533;AC=45;AF=0.804;AN=56;BaseQRankSum=5.975;DP=291;FS=26.044;HRun=9;HaplotypeScore=58.3769;InbreedingCoeff=0.7819;MQ=57.76;MQ0=0;MQRankSum=-5.135;QD=22.19;ReadPosRankSum=1.161;VQSLOD=3.4492;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:48.10:0,48,539	1/1:1,4:5:12:110,12,0	0/0:11,0:10:24.01:0,24,244	0/0:5,0:4:5.99:0,6,57	1/1:1,19:20:54.03:492,54,0	0/0:13,0:13:39.12:0,39,450	0/0:3,0:4:8.86:0,9,84	1/1:3,23:25:66.01:598,66,0	1/1:1,7:8:21.01:192,21,0	1/1:4,14:18:42.01:384,42,0	1/1:0,10:10:24.01:220,24,0	1/1:1,4:5:12:110,12,0	1/1:2,8:10:24:220,24,0	1/1:1,7:8:21.01:192,21,0	1/1:0,12:12:36.02:329,36,0	1/1:0,11:10:27.01:247,27,0	1/1:3,11:14:30.01:274,30,0	1/1:4,7:11:21.01:192,21,0	1/1:5,6:11:18:165,18,0	1/1:0,7:7:21.01:192,21,0	1/1:0,2:2:6:55,6,0	1/1:1,2:3:6:55,6,0	0/1:1,7:8:10.70:168,0,11	1/1:2,5:7:9:82,9,0	1/1:3,12:15:39:351,39,0	1/1:0,11:11:33.02:302,33,0	1/1:0,8:8:21.01:192,21,0	1/1:2,5:7:15.01:137,15,0
chr10	78392426	.	GA	G	4557.03	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=9.577;DP=362;FS=8.119;HRun=9;HaplotypeScore=33.5572;InbreedingCoeff=0.9247;MQ=70.25;MQ0=0;MQRankSum=-0.115;QD=22.45;ReadPosRankSum=0.999;VQSLOD=5.0411;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.15:0,51,588	1/1:0,7:7:21.01:192,21,0	0/0:7,0:7:9.02:0,9,95	0/0:6,0:2:3.01:0,3,35	1/1:1,20:21:54.02:494,54,0	0/0:19,0:19:48.13:0,48,546	0/0:4,0:4:6.02:0,6,69	1/1:4,30:34:90.04:824,90,0	1/1:1,6:7:18:165,18,0	1/1:1,12:13:36.02:329,36,0	1/1:0,20:20:51.02:467,51,0	0/0:2,0:2:6.01:0,6,61	0/0:7,0:7:21.06:0,21,242	1/1:3,7:10:18:165,18,0	1/1:2,8:10:21.01:192,21,0	1/1:3,7:10:18.01:165,18,0	1/1:1,15:16:42.02:384,42,0	0/0:16,1:17:23.68:0,24,526	0/0:12,0:12:33.06:0,33,359	0/0:18,0:18:48.14:0,48,554	0/0:4,0:4:9.03:0,9,104	0/0:7,0:7:21.06:0,21,242	0/0:14,0:14:33.10:0,33,381	0/0:7,0:8:20.89:0,21,222	1/1:4,18:22:51.02:467,51,0	1/1:3,8:11:24.01:220,24,0	0/0:14,0:15:38.95:0,39,430	1/1:0,22:22:54.03:494,54,0
chr10	78392712	.	TTCTTTC	T	1124.45	PASS	AB=0.900;AC=12;AF=0.214;AN=56;BaseQRankSum=2.051;DP=489;FS=1.529;HRun=0;HaplotypeScore=143.1721;InbreedingCoeff=0.5191;MQ=56.45;MQ0=19;MQRankSum=-6.294;QD=18.14;ReadPosRankSum=-3.216;VQSLOD=3.0027;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:59.54:0,60,2033	0/1:8,0:8:15.80:16,0,289	0/0:45,0:12:26.19:0,26,392	0/0:66,0:17:24.89:0,25,505	0/0:22,0:22:65.98:0,66,846	0/0:17,0:17:51.18:0,51,1735	0/0:14,0:12:26.24:0,26,942	0/0:28,0:26:11.46:0,11,592	0/0:16,0:16:34.88:0,35,537	0/0:13,0:13:16.75:0,17,350	0/1:11,0:11:20.47:20,0,257	1/1:2,4:4:9.03:212,9,0	1/1:4,3:6:12.04:251,12,0	0/0:6,0:6:18.01:0,18,201	0/0:12,0:12:31.87:0,32,461	0/0:15,0:14:35.27:0,35,439	0/0:28,0:28:35.52:0,36,937	0/0:32,0:32:41.42:0,41,848	0/0:18,0:17:51.15:0,51,1551	0/0:11,0:11:33.08:0,33,1087	0/0:9,0:9:20.65:0,21,447	1/1:2,0:2:6.02:110,6,0	0/1:4,8:12:99:527,0,213	1/1:1,2:3:8.90:142,9,0	0/0:9,0:9:9.75:0,10,222	0/1:13,0:13:3.64:4,0,469	0/0:20,0:20:45.15:0,45,1527	0/0:18,0:18:33.02:0,33,557
chr10	78392716	.	TTC	T	6688.85	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=4.637;DP=494;FS=4.678;HRun=0;HaplotypeScore=95.3761;InbreedingCoeff=0.8715;MQ=56.02;MQ0=19;MQRankSum=0.877;QD=25.53;ReadPosRankSum=2.984;VQSLOD=5.4514;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:68.97:0,69,1088	1/1:2,6:8:8.73:226,9,0	0/0:45,0:12:18.33:0,18,216	0/0:68,0:17:21.47:0,21,302	1/1:4,18:22:42.75:681,43,0	0/0:17,0:17:51.17:0,51,882	0/0:11,0:9:27.08:0,27,441	1/1:12,20:30:5.59:490,6,0	1/1:5,11:16:16.13:365,16,0	1/1:2,11:13:26.79:430,27,0	1/1:2,8:10:26.67:325,27,0	1/1:5,0:3:8.83:54,9,0	1/1:6,0:5:8.83:54,9,0	1/1:3,3:6:15.05:199,15,0	1/1:4,9:13:33.07:407,33,0	1/1:3,12:14:31.46:472,31,0	1/1:6,21:27:47.79:747,48,0	1/1:6,26:32:54.42:825,54,0	0/0:19,0:18:46.70:0,47,776	0/0:13,0:13:30.10:0,30,496	0/0:9,0:9:11.80:0,12,136	1/1:1,1:2:6:63,6,0	1/1:12,0:12:6.65:136,7,0	1/1:3,0:3:4.73:23,5,0	1/1:2,7:9:4.08:223,4,0	1/1:3,9:12:20.67:324,21,0	0/0:21,0:21:42.14:0,42,699	1/1:4,15:19:45.98:644,46,0
chr10	78392775	.	C	CTCTTTCTT	15325.61	PASS	AB=0.536;AC=45;AF=0.804;AN=56;BaseQRankSum=0.660;DP=502;FS=2.593;HRun=0;HaplotypeScore=120.9062;InbreedingCoeff=0.7636;MQ=40.25;MQ0=18;MQRankSum=-7.134;QD=41.87;ReadPosRankSum=0.938;VQSLOD=4.3388;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:86.79:0,87,1836	1/1:9,0:8:15.04:345,15,0	0/0:28,0:3:3.01:0,3,79	0/0:37,0:9:8.69:0,9,121	1/1:15,7:22:36.10:1086,36,0	0/0:19,0:18:36.05:0,36,844	0/0:17,0:17:34.96:0,35,907	1/1:17,0:13:6.01:95,6,0	1/1:13,5:19:33.06:985,33,0	1/1:12,6:18:48.14:1344,48,0	1/1:7,1:8:17.62:366,18,0	1/1:2,12:14:20.21:655,20,0	1/1:2,13:16:18.06:748,18,0	1/1:3,10:13:21.06:702,21,0	1/1:6,10:16:20.98:372,21,0	1/1:13,5:17:33.08:900,33,0	1/1:17,5:21:35.76:812,36,0	1/1:11,0:21:44.74:360,45,0	1/1:7,10:14:33.10:1051,33,0	1/1:3,11:14:27.01:752,27,0	1/1:0,6:6:3.01:125,3,0	1/1:3,9:12:14.10:523,14,0	1/1:9,3:12:26.99:606,27,0	0/1:2,12:15:34.37:350,0,34	1/1:6,7:13:30.10:1064,30,0	1/1:11,1:18:32.02:360,32,0	1/1:4,24:29:42.07:1489,42,0	1/1:7,0:16:30.25:233,30,0
chr10	78392813	.	CTCTT	C	3899.24	PASS	AB=0.886;AC=37;AF=0.712;AN=52;BaseQRankSum=2.562;DP=467;FS=12.300;HRun=0;HaplotypeScore=123.0131;InbreedingCoeff=0.3925;MQ=41.78;MQ0=10;MQRankSum=-1.379;QD=12.54;ReadPosRankSum=0.804;VQSLOD=2.4463;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:50.20:0,50,1025	1/1:2,2:3:3.01:46,3,0	./.	./.	1/1:11,0:13:12.02:122,12,0	0/1:11,0:11:1.20:1,0,357	0/0:23,0:23:24.08:0,24,448	0/0:24,0:18:3.01:0,3,41	1/1:10,2:17:23.96:248,24,0	0/1:14,5:19:4.71:426,0,5	1/1:10,1:11:24.08:355,24,0	1/1:17,0:17:2.11:67,2,0	1/1:10,0:11:5.97:48,6,0	1/1:12,4:16:18.06:267,18,0	1/1:8,0:13:15.02:140,15,0	1/1:14,6:20:30.10:455,30,0	1/1:14,12:25:5.50:560,6,0	0/1:16,8:24:34.32:416,0,34	1/1:11,0:9:3:27,3,0	1/1:11,0:11:15.02:143,15,0	1/1:5,0:5:5.88:43,6,0	1/1:9,0:12:9.01:83,9,0	0/1:7,0:8:18.39:22,0,18	0/1:19,0:19:9.19:9,0,33	1/1:8,2:10:9.03:137,9,0	0/0:21,0:25:44.35:0,44,565	1/1:29,0:29:31.87:286,32,0	0/0:17,0:16:3.40:0,3,18
chr10	78394372	.	TTGTGTGTGTGTGTG	T	405.29	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=2.902;DP=657;FS=3.691;HRun=0;HaplotypeScore=234.1232;InbreedingCoeff=0.6651;MQ=62.10;MQ0=19;MQRankSum=-2.461;QD=6.43;ReadPosRankSum=-2.233;VQSLOD=2.4862;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:48.13:0,48,1962	1/1:3,2:6:3.01:76,3,0	0/0:27,0:16:6:0,6,67	0/0:27,0:22:6.01:0,6,66	./.	0/0:28,0:28:37.36:0,37,1678	0/0:41,0:40:32.32:0,32,1265	0/0:20,0:20:12.04:0,12,452	0/0:22,0:22:14.99:0,15,673	1/1:16,5:21:11.36:371,11,0	1/1:11,0:13:2.78:22,3,0	0/0:22,0:17:12.51:0,13,398	0/0:19,0:14:17.56:0,18,536	0/0:18,0:17:14.36:0,14,661	1/1:15,7:21:4.78:62,5,0	0/0:22,0:21:11.82:0,12,687	0/0:30,0:28:32.88:0,33,1489	0/0:10,0:10:22.60:0,23,962	0/0:20,0:19:8.52:0,9,179	0/0:18,0:18:24.07:0,24,581	0/0:46,0:44:45:0,45,1077	0/0:27,0:24:24.34:0,24,869	0/0:17,0:17:9.03:0,9,240	0/0:32,0:31:18.06:0,18,880	0/0:27,0:24:18.05:0,18,579	0/0:25,0:24:32.31:0,32,1008	0/0:18,0:18:1.43:0,1,38	0/0:13,0:13:17.65:0,18,538
chr10	78394413	.	TGTGTGAGAGAGA	T	1194.71	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=0.968;DP=570;FS=3.382;HRun=0;HaplotypeScore=180.0732;InbreedingCoeff=0.5612;MQ=43.88;MQ0=29;MQRankSum=-1.519;QD=7.96;ReadPosRankSum=-0.336;VQSLOD=2.7890;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:75.23:0,75,2163	0/1:7,0:7:23.26:23,0,137	0/0:10,0:2:6.02:0,6,195	0/0:14,0:5:12.04:0,12,337	0/0:25,0:25:24.08:0,24,814	0/0:23,0:23:42.91:0,43,1164	0/0:29,0:28:35.92:0,36,987	0/0:19,0:16:40.64:0,41,575	0/0:21,0:21:27.06:0,27,774	0/1:23,0:23:27.02:27,0,1429	0/0:14,0:14:12.04:0,12,372	0/0:17,0:13:9.45:0,9,144	0/0:16,0:11:17.61:0,18,143	0/0:16,0:15:23.53:0,24,706	0/0:23,0:21:26.57:0,27,892	0/0:17,0:15:21.07:0,21,485	0/0:31,0:26:54.66:0,55,1544	0/0:9,0:9:24.51:0,25,449	1/1:12,0:10:14.76:203,15,0	1/1:17,0:16:11.85:156,12,0	1/1:41,0:36:24.94:332,25,0	0/0:22,0:21:21.02:0,21,370	0/0:17,0:16:0.94:0,1,2	0/0:31,0:28:18.53:0,19,354	0/0:20,0:17:30.99:0,31,1062	0/1:18,0:18:99:466,0,118	1/1:7,25:32:7.27:150,7,0	0/0:8,0:8:8.70:0,9,97
chr10	78394417	.	TGAGAGAGA	T	805.22	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=2.727;DP=579;FS=4.299;HRun=0;HaplotypeScore=166.0235;InbreedingCoeff=0.6588;MQ=44.20;MQ0=28;MQRankSum=-2.874;QD=11.84;ReadPosRankSum=0.682;VQSLOD=2.7177;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:62.02:0,62,1745	0/0:7,0:7:6.02:0,6,150	0/0:10,0:2:6.02:0,6,195	0/0:18,0:6:15.05:0,15,373	0/0:27,0:27:30.10:0,30,998	0/0:22,0:22:37.40:0,37,926	0/0:30,0:29:31.30:0,31,1076	0/0:18,0:15:29.86:0,30,634	0/0:21,0:21:18.06:0,18,655	0/0:25,0:25:54.65:0,55,1706	0/0:14,0:14:12.04:0,12,372	0/0:16,0:12:3.48:0,3,99	0/0:16,0:11:8.64:0,9,53	0/0:16,0:15:17.82:0,18,569	0/0:23,0:21:26.79:0,27,880	0/0:16,0:14:9.03:0,9,280	0/0:33,0:28:42.58:0,43,1321	0/0:9,0:9:9.03:0,9,211	1/1:7,4:9:11.88:175,12,0	0/0:5,13:17:0:0,0,0	0/0:21,17:33:2.79:0,3,26	0/0:25,0:24:8.66:0,9,207	0/0:17,0:16:0.85:0,1,1	0/0:34,0:32:5.97:0,6,123	0/0:21,0:18:27.98:0,28,956	1/1:6,1:17:33.01:618,33,0	1/1:31,0:32:7.50:103,8,0	1/1:4,0:8:3.01:47,3,0
chr10	78394428	.	G	GAGAA	1552.89	PASS	AB=0.946;AC=20;AF=0.357;AN=56;BaseQRankSum=7.331;DP=571;FS=15.687;HRun=0;HaplotypeScore=141.7351;InbreedingCoeff=-0.0904;MQ=46.70;MQ0=22;MQRankSum=0.022;QD=4.96;ReadPosRankSum=3.169;VQSLOD=1.8687;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:84.03:0,84,1161	0/1:7,0:7:22.03:22,0,39	0/0:15,0:5:11.06:0,11,148	0/0:25,0:9:23.97:0,24,292	0/1:30,0:30:99:153,0,135	0/0:23,0:23:33.05:0,33,432	0/0:31,0:30:56.99:0,57,587	0/0:19,0:16:5.41:0,5,241	0/1:14,0:14:17.21:125,0,17	0/1:32,0:32:99:145,0,379	1/1:14,0:14:1.70:37,2,0	1/1:6,1:14:3.01:63,3,0	1/1:7,8:11:1.12:28,1,0	0/1:14,0:14:49.43:49,0,57	0/1:22,0:21:68.86:153,0,69	0/1:17,0:15:49.21:49,0,95	0/1:27,0:23:30.67:290,0,31	0/1:10,0:10:51.80:52,0,59	0/0:11,0:10:26.13:0,26,206	0/0:18,0:17:8.95:0,9,75	0/0:23,0:21:8.48:0,8,54	1/1:26,0:26:25.97:306,26,0	0/1:9,0:18:14.76:15,0,15	0/1:15,11:25:45.95:64,0,46	0/1:21,0:18:78.69:165,0,79	0/0:16,0:16:41.15:0,41,361	0/0:27,0:27:5.41:0,5,47	0/0:8,0:7:11.98:0,12,102
chr10	78394564	.	C	CTGTGTG	2784.41	PASS	AB=0.892;AC=42;AF=0.808;AN=52;BaseQRankSum=0.439;DP=822;FS=1.277;HRun=0;HaplotypeScore=215.9352;InbreedingCoeff=0.5022;MQ=48.52;MQ0=14;MQRankSum=-2.455;QD=4.88;ReadPosRankSum=-2.352;VQSLOD=2.3224;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:70,0:72:99:0,105,1810	0/1:21,0:21:0.03:0,0,0	./.	./.	1/1:22,0:21:11.89:95,12,0	0/0:21,0:20:32.61:0,33,625	0/0:28,0:30:46.31:0,46,784	0/1:29,0:35:31.01:396,0,31	1/1:27,0:27:11.17:123,11,0	1/1:26,0:26:14.70:181,15,0	1/1:19,0:18:8.34:104,8,0	1/1:17,0:17:8.85:124,9,0	1/1:26,0:26:2.74:29,3,0	1/1:30,0:29:17.05:194,17,0	0/0:23,0:22:0.54:0,1,2	1/1:14,0:14:5.46:97,5,0	1/1:24,0:20:10.83:152,11,0	1/1:3,0:13:9.65:117,10,0	1/1:22,0:17:9.91:108,10,0	1/1:14,10:26:2.04:95,2,0	1/1:43,18:61:5.32:59,5,0	1/1:12,0:29:1.87:21,2,0	1/1:25,0:24:16.87:196,17,0	1/1:37,0:37:4.68:66,5,0	1/1:29,0:28:16.62:191,17,0	1/1:33,0:31:25.92:236,26,0	1/1:8,1:12:12.04:311,12,0	1/1:14,0:14:3.48:33,3,0
chr10	78395277	.	AAAGGCCAGGGGAAATC	A	4614.84	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.456;DP=748;FS=1.988;HRun=0;HaplotypeScore=312.6242;InbreedingCoeff=0.9963;MQ=82.83;MQ0=0;MQRankSum=-9.232;QD=52.44;ReadPosRankSum=-0.363;VQSLOD=3.8754;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,160,11053	0/0:14,0:14:39.13:0,39,2917	0/0:25,0:25:66.23:0,66,3239	0/0:22,0:22:48.16:0,48,3148	0/0:20,0:20:54.19:0,54,4094	0/0:12,0:12:36.12:0,36,2823	0/0:39,0:39:99:0,102,7044	0/0:33,0:33:81.27:0,81,4996	0/0:24,0:24:66.23:0,66,4433	0/0:28,0:28:75.26:0,75,5209	0/0:11,0:11:33.11:0,33,2233	0/0:23,0:23:69.23:0,69,4713	0/0:30,0:30:81.28:0,81,6006	0/0:38,0:38:99:0,111,8323	0/0:41,0:41:99:0,120,8259	0/0:37,0:37:99:0,102,7334	0/0:41,0:41:99:0,108,7808	0/0:26,0:26:75.26:0,75,5380	1/1:11,6:17:18.06:656,18,0	1/1:9,9:18:30.06:999,30,0	1/1:12,21:33:32.70:1015,33,0	0/0:19,0:19:54.19:0,54,4003	0/0:15,0:15:42.14:0,42,3018	0/0:41,0:41:99:0,111,7731	0/0:33,0:33:90.31:0,90,6636	0/0:28,0:28:81.27:0,81,5673	1/1:6,14:20:42.14:1946,42,0	0/0:7,0:7:21.07:0,21,1470
chr10	78395799	.	A	AC	6837.32	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-4.945;DP=672;FS=3.973;HRun=5;HaplotypeScore=76.2807;InbreedingCoeff=0.9961;MQ=79.99;MQ0=0;MQRankSum=-2.110;QD=27.13;ReadPosRankSum=1.171;VQSLOD=4.9577;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,123,1304	1/1:0,0:10:28.74:149,29,0	0/0:20,0:20:54.03:0,54,551	0/0:17,0:17:13.45:0,13,374	1/1:1,0:15:40.45:218,40,0	0/0:23,0:23:63.16:0,63,677	0/0:26,0:26:69.14:0,69,724	1/1:4,18:22:51.12:618,51,0	1/1:2,25:27:78.25:1016,78,0	1/1:2,0:21:51.75:266,52,0	1/1:2,1:18:42.93:218,43,0	0/0:29,0:29:78.16:0,78,821	0/0:14,0:14:39.10:0,39,419	1/1:3,33:36:96.10:1236,96,0	1/1:1,1:22:46:236,46,0	1/1:1,22:23:60.20:789,60,0	1/1:1,34:35:90.29:1184,90,0	0/0:27,0:27:72.15:0,72,762	0/0:31,0:31:81.19:0,81,863	0/0:13,0:13:39.06:0,39,406	0/0:42,0:42:99:0,123,1318	0/0:20,0:20:54.13:0,54,575	0/0:20,0:20:60.13:0,60,634	0/0:27,0:27:72.18:0,72,774	1/1:0,23:23:69.22:907,69,0	0/0:27,0:28:69.34:0,69,856	0/0:25,0:25:69.17:0,69,741	0/0:9,0:9:21.05:0,21,226
chr10	78396744	.	TCTCGTGGGATAATCAGCAGTTTGGGAC	T	27476.77	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=14.457;DP=875;FS=2.017;HRun=0;HaplotypeScore=514.6179;InbreedingCoeff=0.8334;MQ=66.17;MQ0=0;MQRankSum=-10.872;QD=39.71;ReadPosRankSum=2.880;VQSLOD=1.1479;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,141,13737	1/1:9,10:19:12.04:837,12,0	0/0:33,0:32:42.14:0,42,1884	0/0:21,0:21:42.14:0,42,2333	1/1:13,9:22:18.06:1015,18,0	0/0:28,0:28:66.21:0,66,6235	0/0:40,0:40:72.22:0,72,5573	1/1:20,10:30:28.20:338,28,0	1/1:11,17:28:27.09:1882,27,0	1/1:18,17:35:45.06:2133,45,0	1/1:9,9:18:14.98:848,15,0	1/1:16,23:39:17.77:1252,18,0	1/1:12,26:38:27.09:1881,27,0	1/1:19,29:48:27.09:1878,27,0	1/1:23,23:46:33.11:2274,33,0	1/1:17,30:47:39.13:2659,39,0	1/1:13,13:26:9.03:627,9,0	1/1:10,8:18:6.02:418,6,0	1/1:20,11:31:32.79:1359,33,0	1/1:17,11:28:23.84:978,24,0	0/1:32,0:31:0:0,0,0	1/1:17,18:35:30.02:1717,30,0	1/1:7,13:20:9.03:621,9,0	1/1:17,21:38:6.02:334,6,0	1/1:11,12:23:9.03:627,9,0	1/1:18,19:37:52.25:2753,52,0	1/1:15,11:26:12.04:836,12,0	1/1:7,1:8:3.01:209,3,0
chr10	78397237	.	G	GCCC	4377.55	PASS	AB=1.000;AC=25;AF=0.481;AN=52;BaseQRankSum=-1.534;DP=510;FS=36.646;HRun=6;HaplotypeScore=77.6809;InbreedingCoeff=0.8473;MQ=78.46;MQ0=0;MQRankSum=-4.889;QD=24.87;ReadPosRankSum=1.881;VQSLOD=0.7665;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,111,1529	./.	0/0:22,0:22:39.69:0,40,548	0/0:19,0:19:42.09:0,42,546	1/1:4,0:4:3.01:49,3,0	0/0:17,0:17:48.16:0,48,677	0/0:42,0:42:99:0,108,1356	0/0:26,0:26:63.19:0,63,873	1/1:1,23:25:45.63:957,46,0	0/1:5,0:5:2.99:15,0,3	./.	1/1:3,0:20:24.08:339,24,0	1/1:8,0:20:21.07:302,21,0	1/1:4,12:16:21.07:444,21,0	1/1:6,0:6:4.15:22,4,0	1/1:1,14:15:29.85:637,30,0	1/1:0,18:21:44.90:891,45,0	0/0:28,0:27:81.27:0,81,1148	0/0:15,0:15:42.12:0,42,575	0/0:19,0:19:48.14:0,48,662	0/0:55,0:54:99:0,141,1915	1/1:2,0:7:3.01:43,3,0	1/1:6,0:7:5.91:38,6,0	1/1:2,2:16:15.05:258,15,0	1/1:1,12:13:18.06:382,18,0	0/0:24,0:24:63.19:0,63,877	0/0:17,0:17:42.13:0,42,592	0/0:5,0:5:9.02:0,9,128
chr10	78397375	.	CT	C	2509.09	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.505;DP=555;FS=1.945;HRun=7;HaplotypeScore=54.4858;InbreedingCoeff=0.9979;MQ=80.49;MQ0=0;MQRankSum=-2.753;QD=22.81;ReadPosRankSum=-0.267;VQSLOD=3.3364;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1338	0/0:6,0:6:18.04:0,18,213	0/0:14,0:14:30.03:0,30,371	0/0:17,0:18:47.95:0,48,526	0/0:22,0:22:60.19:0,60,753	0/0:23,0:23:69.21:0,69,853	0/0:29,0:29:84.26:0,84,1043	0/0:31,0:31:78.23:0,78,959	0/0:23,0:23:66.18:0,66,802	0/0:13,0:13:36.12:0,36,453	0/0:16,0:16:42.11:0,42,502	0/0:20,0:20:57.17:0,57,703	0/0:21,0:21:63.12:0,63,759	0/0:20,0:20:51.16:0,51,641	0/0:13,0:13:39.12:0,39,491	0/0:19,0:19:51.16:0,51,642	0/0:18,0:18:48.15:0,48,603	1/1:3,22:25:63.14:643,63,0	1/1:4,16:20:45.07:450,45,0	1/1:3,20:23:57.12:582,57,0	1/1:0,22:22:54.12:551,54,0	0/0:16,0:16:45.14:0,45,566	0/0:12,0:12:36.11:0,36,452	0/0:23,0:23:57.17:0,57,703	0/0:17,0:17:45.14:0,45,566	0/0:22,0:22:63.20:0,63,793	1/1:0,20:20:45.10:459,45,0	0/0:13,0:13:36.11:0,36,442
chr10	78397703	.	AT	A	13085.64	PASS	AB=0.566;AC=45;AF=0.804;AN=56;BaseQRankSum=10.806;DP=651;FS=11.793;HRun=8;HaplotypeScore=85.5560;InbreedingCoeff=0.9348;MQ=74.03;MQ0=0;MQRankSum=-3.945;QD=24.37;ReadPosRankSum=1.585;VQSLOD=4.8002;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,147,1757	1/1:0,9:9:24.04:232,24,0	0/0:11,0:11:21.06:0,21,244	0/0:11,0:11:21.06:0,21,253	1/1:0,42:42:99:1101,114,0	0/0:17,0:17:51.13:0,51,601	0/0:23,0:23:69.21:0,69,834	1/1:8,22:30:66.04:623,66,0	1/1:1,16:17:45.07:435,45,0	1/1:4,21:25:63.09:604,63,0	1/1:0,24:24:69.11:666,69,0	1/1:1,21:22:63.10:608,63,0	1/1:2,23:25:63.10:608,63,0	1/1:3,23:26:69.11:666,69,0	1/1:2,31:33:81.13:782,81,0	1/1:4,24:28:66.10:637,66,0	1/1:1,27:28:78.13:753,78,0	1/1:2,12:14:33.04:319,33,0	1/1:4,22:26:66.09:632,66,0	1/1:1,19:20:54.08:522,54,0	1/1:3,24:27:57.08:550,57,0	1/1:2,14:16:42.06:406,42,0	1/1:2,15:17:45.07:435,45,0	0/1:7,23:30:0.34:565,0,0	1/1:2,11:13:27.04:261,27,0	1/1:1,23:24:69.11:666,69,0	1/1:3,30:33:87.14:840,87,0	1/1:2,6:8:18.03:174,18,0
chr10	78397892	.	AATTAG	A	18923.25	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=17.087;DP=652;FS=10.583;HRun=0;HaplotypeScore=132.8992;InbreedingCoeff=1.0000;MQ=86.32;MQ0=0;MQRankSum=-9.297;QD=61.64;ReadPosRankSum=4.385;VQSLOD=5.6569;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,3872	1/1:0,14:14:36.59:840,37,0	0/0:23,0:23:66.23:0,66,1905	0/0:27,0:27:72.71:0,73,2069	1/1:0,28:28:75.26:1745,75,0	0/0:27,0:27:81.28:0,81,2657	0/0:20,0:20:60.21:0,60,1912	0/0:34,0:34:99:0,102,3189	1/1:0,20:20:57.20:1327,57,0	1/1:0,23:23:69.24:1569,69,0	1/1:0,17:17:51.18:1171,51,0	1/1:1,18:19:51.18:1169,51,0	1/1:0,20:20:51.18:1188,51,0	1/1:0,18:18:54.19:1257,54,0	1/1:0,28:28:66.23:1536,66,0	1/1:0,19:19:48.16:1118,48,0	1/1:0,22:22:57.19:1282,57,0	0/0:16,0:16:45.15:0,45,1423	0/0:33,0:33:96.33:0,96,3007	0/0:27,0:27:81.28:0,81,2620	0/0:19,0:19:57.20:0,57,1853	1/1:0,19:19:45.15:1035,45,0	1/1:0,22:22:60.21:1383,60,0	1/1:0,16:16:35.64:837,36,0	1/1:0,22:22:63.22:1465,63,0	0/0:33,0:33:99:0,99,3210	0/0:31,0:31:93.32:0,93,3043	0/0:14,0:14:42.14:0,42,1384
chr10	78399333	.	TAA	T	5936.80	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=12.410;DP=651;FS=1.102;HRun=14;HaplotypeScore=115.4876;InbreedingCoeff=0.9928;MQ=73.67;MQ0=0;MQRankSum=1.309;QD=17.01;ReadPosRankSum=6.209;VQSLOD=3.8507;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:30:66.25:0,66,824	1/1:2,8:10:15:139,15,0	0/0:24,0:21:22.87:0,23,270	0/0:17,0:13:12.88:0,13,122	1/1:10,21:32:56.65:505,57,0	0/0:22,0:22:48.01:0,48,575	0/0:19,0:21:50.88:0,51,601	0/0:29,0:29:57.16:0,57,753	1/1:5,16:21:36:333,36,0	1/1:10,20:30:53.88:493,54,0	1/1:3,16:20:44.07:387,44,0	1/1:5,13:18:36:333,36,0	1/1:3,21:25:56.76:510,57,0	1/1:8,18:26:40.17:363,40,0	1/1:4,29:33:77.80:706,78,0	1/1:8,20:28:41.01:410,41,0	1/1:5,25:31:40.39:468,40,0	0/0:18,0:20:50.64:0,51,651	0/0:16,0:19:44.58:0,45,511	0/0:32,2:36:63.54:0,64,1034	0/0:12,0:14:32.05:0,32,360	1/1:2,17:20:47.72:425,48,0	1/1:7,9:17:25.36:225,25,0	1/1:2,14:16:30.02:278,30,0	1/1:4,16:22:35.59:364,36,0	0/0:29,2:31:41.39:0,41,792	0/0:30,0:31:78.27:0,78,974	0/0:5,0:7:20.04:0,20,228
chr10	78400138	.	T	TTCTGTCTGTCTGTCTG	17491.64	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=3.902;DP=720;FS=24.631;HRun=0;HaplotypeScore=290.1559;InbreedingCoeff=0.8785;MQ=58.03;MQ0=4;MQRankSum=-10.767;QD=44.97;ReadPosRankSum=-2.220;VQSLOD=2.9800;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:84.25:0,84,3209	1/1:11,0:11:24.08:1403,24,0	0/0:19,0:13:2.97:0,3,20	0/1:26,0:24:3.39:3,0,171	1/1:15,0:24:18.06:708,18,0	0/0:31,0:34:56.73:0,57,1795	0/0:30,0:30:48.14:0,48,1756	0/0:31,0:31:12.03:0,12,236	1/1:15,8:29:18.06:1141,18,0	1/1:15,4:24:42.13:1915,42,0	1/1:13,8:21:17.74:1123,18,0	1/1:26,0:26:27.05:1125,27,0	1/1:18,0:32:18.06:1199,18,0	1/1:12,10:21:21.07:1532,21,0	1/1:12,14:26:9.03:637,9,0	1/1:15,7:24:21.07:1351,21,0	1/1:17,12:31:18.06:1248,18,0	0/0:14,0:14:27.09:0,27,1046	0/0:17,0:19:27.07:0,27,876	0/0:22,0:22:51.15:0,51,1898	0/0:37,0:37:63.20:0,63,2393	1/1:11,5:16:6.02:338,6,0	1/1:9,6:17:27.56:1610,28,0	1/1:24,8:34:8.84:606,9,0	1/1:16,7:24:24.08:1553,24,0	0/0:24,0:24:36.10:0,36,1133	0/0:44,0:44:87.27:0,87,3372	0/0:15,0:15:11.08:0,11,1135
chr10	78400740	.	C	CT	18684.63	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=5.031;DP=884;FS=0.000;HRun=1;HaplotypeScore=99.4528;InbreedingCoeff=0.9999;MQ=79.01;MQ0=0;MQRankSum=-1.975;QD=39.50;ReadPosRankSum=5.092;VQSLOD=4.8179;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,1817	1/1:1,12:13:33.06:447,33,0	0/0:22,0:22:48.13:0,48,607	0/0:19,0:19:35.54:0,36,462	1/1:2,32:34:93.27:1368,93,0	0/0:23,0:23:60.19:0,60,779	0/0:35,0:35:99:0,105,1348	0/0:32,0:32:90.28:0,90,1155	1/1:1,29:30:75.25:1069,75,0	1/1:0,33:33:96.28:1393,96,0	1/1:1,23:24:66.19:962,66,0	1/1:1,38:39:99:1619,108,0	1/1:0,39:39:99:1573,105,0	1/1:1,31:32:90.30:1292,90,0	1/1:1,29:30:75.25:1124,75,0	1/1:0,42:42:99:1744,120,0	1/1:0,30:30:84.28:1218,84,0	0/0:35,1:36:63.36:0,63,1270	0/0:19,0:19:57.17:0,57,727	0/0:34,0:34:99:0,102,1305	0/0:55,0:55:99:0,159,2046	1/1:2,35:37:99:1492,102,0	1/1:1,28:29:81.27:1214,81,0	1/1:0,36:36:87.29:1304,87,0	1/1:0,25:25:60.20:865,60,0	0/0:39,1:40:75.38:0,75,1441	0/0:30,0:27:90.28:0,90,1150	0/0:18,0:18:54.13:0,54,669
chr10	78401643	.	CAGACGGACCACTGCTTCAA	C	25623.77	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=16.238;DP=524;FS=8.887;HRun=0;HaplotypeScore=287.5467;InbreedingCoeff=0.9683;MQ=77.45;MQ0=1;MQRankSum=-16.217;QD=108.58;ReadPosRankSum=5.152;VQSLOD=3.3476;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,8560	1/1:0,9:9:24.08:1277,24,0	0/0:13,0:13:34.06:0,34,1822	0/0:20,0:20:47.55:0,48,2717	1/1:4,29:32:69.24:3682,69,0	0/0:24,0:24:66.21:0,66,5340	0/0:19,0:19:54.19:0,54,4284	0/0:26,0:26:69.15:0,69,4982	0/0:17,0:17:51.18:0,51,4588	1/1:4,11:15:36.09:1573,36,0	1/1:1,11:12:30.10:1601,30,0	1/1:3,12:15:36.12:1929,36,0	1/1:1,14:15:36.12:1907,36,0	0/0:27,0:27:78.21:0,78,6114	1/1:5,20:25:51.18:2733,51,0	0/0:19,0:18:51.18:0,51,4299	0/0:32,0:32:96.33:0,96,8275	1/1:3,13:16:36.12:1911,36,0	1/1:2,10:12:27.09:1346,27,0	1/1:6,15:21:36.12:1929,36,0	1/1:5,3:8:3.01:161,3,0	1/1:0,6:6:12.04:643,12,0	1/1:2,18:20:45.15:2361,45,0	1/1:6,8:14:14.63:803,15,0	0/0:19,0:19:48.16:0,48,3787	0/0:27,0:27:78.25:0,78,6308	1/1:2,13:15:33.11:1768,33,0	0/0:8,0:8:21.07:0,21,1850
chr10	78401963	.	CTG	C	4783.74	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.915;DP=638;FS=0.823;HRun=0;HaplotypeScore=81.2525;InbreedingCoeff=0.9984;MQ=84.72;MQ0=0;MQRankSum=-1.968;QD=41.60;ReadPosRankSum=2.652;VQSLOD=6.5988;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,2377	1/1:0,8:8:21.07:342,21,0	0/0:29,0:28:63.38:0,63,1385	0/0:16,0:16:39.27:0,39,672	1/1:0,32:32:75.26:1207,75,0	0/0:21,0:21:63.22:0,63,1279	0/0:20,0:20:60.21:0,60,1218	0/0:32,0:32:93.31:0,93,1813	0/0:21,0:21:63.22:0,63,1261	1/1:0,28:28:84.17:1279,84,0	1/1:0,24:24:60.20:978,60,0	0/0:21,0:21:63.22:0,63,1246	0/0:22,0:22:66.23:0,66,1325	0/0:23,0:23:69.24:0,69,1390	1/1:0,23:23:60.20:978,60,0	0/0:20,0:20:60.21:0,60,1207	0/0:31,0:31:86.98:0,87,1691	0/0:27,0:27:81.26:0,81,1608	0/0:17,0:17:51.17:0,51,999	0/0:30,0:30:90.30:0,90,1774	0/0:8,0:8:24.07:0,24,451	0/0:20,0:20:57.18:0,57,1086	0/0:14,0:14:42.14:0,42,851	0/0:18,0:18:54.19:0,54,1096	0/0:21,0:21:63.21:0,63,1231	0/0:27,1:28:32.32:0,32,1503	0/0:33,0:33:99:0,99,1924	0/0:11,0:11:33.11:0,33,670
chr10	78405045	.	AGATTAAAAGTCTG	A	7217.14	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.193;DP=537;FS=6.703;HRun=0;HaplotypeScore=200.6080;InbreedingCoeff=0.9898;MQ=92.92;MQ0=0;MQRankSum=-12.184;QD=77.60;ReadPosRankSum=4.147;VQSLOD=3.9681;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:99:0,123,7778	0/0:7,0:7:21.07:0,21,1390	0/0:19,0:19:57.09:0,57,2960	0/0:31,0:31:90.26:0,90,4796	0/0:15,0:15:42.14:0,42,2344	0/0:18,0:18:51.16:0,51,3200	0/0:28,0:28:81.25:0,81,5041	0/0:39,0:39:99:0,105,5088	1/1:0,11:11:15.05:605,15,0	0/0:17,0:17:51.18:0,51,3207	0/0:11,0:11:33.11:0,33,2189	0/0:21,0:21:63.21:0,63,3697	0/0:23,0:23:63.20:0,63,3784	1/1:0,25:25:51:2028,51,0	0/0:20,0:20:60.21:0,60,3844	1/1:0,23:23:54.19:2177,54,0	1/1:3,17:20:33.11:1330,33,0	0/0:23,0:23:69.24:0,69,4396	0/0:20,0:20:60.21:0,60,3490	0/0:9,0:9:24.08:0,24,1485	0/0:17,0:17:51.18:0,51,3378	0/0:12,0:12:36.12:0,36,2148	0/0:7,0:7:21.06:0,21,1027	0/0:33,0:33:99:0,99,6263	1/1:1,13:14:27.09:1078,27,0	0/0:13,0:13:39.13:0,39,2416	0/0:15,0:15:39.13:0,39,2519	0/0:5,0:5:15.05:0,15,996
chr10	78405291	.	GCACACACACACACACACACACACACACACACACACACA	G	1197.62	PASS	AB=0.933;AC=13;AF=0.295;AN=44;BaseQRankSum=4.892;DP=377;FS=3.563;HRun=0;HaplotypeScore=277.6380;InbreedingCoeff=0.4682;MQ=57.70;MQ0=22;MQRankSum=-2.820;QD=11.19;ReadPosRankSum=1.774;VQSLOD=2.5112;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:48.07:0,48,5767	0/1:3,0:3:0:0,0,0	0/0:29,0:14:15.01:0,15,337	0/0:23,0:13:21.06:0,21,773	0/1:9,0:9:0:0,0,0	0/0:13,0:13:21.96:0,22,2836	0/0:20,0:20:45.15:0,45,3656	0/0:16,0:15:36.11:0,36,1389	1/1:10,6:16:3.01:75,3,0	0/1:10,0:8:0:0,0,0	./.	0/0:14,0:13:30.53:0,31,1905	0/0:8,0:10:18.03:0,18,915	1/1:13,6:22:9.03:606,9,0	./.	1/1:8,4:12:3.01:36,3,0	1/1:15,0:14:5.98:46,6,0	0/0:6,0:6:12:0,12,158	0/1:5,0:5:18.01:18,0,98	./.	0/0:19,0:18:6.43:0,6,35	0/0:8,0:10:2.72:0,3,280	0/0:5,0:8:3.01:0,3,282	0/0:24,0:20:24.06:0,24,1588	./.	./.	0/1:7,0:14:10.95:543,0,11	./.
chr10	78405325	.	A	AG	125.54	PASS	AB=0.964;AC=6;AF=0.150;AN=40;BaseQRankSum=0.185;DP=318;FS=5.455;HRun=0;HaplotypeScore=88.4088;InbreedingCoeff=0.3112;MQ=38.33;MQ0=50;MQRankSum=-3.364;QD=2.62;ReadPosRankSum=0.409;VQSLOD=2.4731;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:41:75.22:0,75,990	./.	./.	0/0:9,0:2:6.02:0,6,80	0/0:1,0:1:0:0,0,0	0/0:20,0:20:24.48:0,24,300	0/0:21,0:18:32.99:0,33,414	0/0:17,0:14:39.12:0,39,511	0/0:10,0:10:3.01:0,3,32	./.	./.	0/0:16,0:16:29.83:0,30,390	0/0:14,0:13:23.97:0,24,302	0/0:11,0:11:6.09:0,6,31	./.	0/0:11,0:9:3.01:0,3,33	0/1:12,1:8:20.35:40,0,20	0/1:8,0:6:29.34:29,0,119	1/1:6,2:5:8.99:117,9,0	0/0:3,0:2:0:0,0,0	1/1:11,8:11:3.32:48,3,0	0/0:13,0:12:3.48:0,3,42	0/0:9,0:9:3.01:0,3,41	0/0:34,0:25:36.06:0,36,441	./.	./.	0/0:11,0:10:8.02:0,8,56	./.
chr10	78405329	.	A	AG	39.32	PASS	AB=0.889;AC=6;AF=0.150;AN=40;BaseQRankSum=1.951;DP=324;FS=1.476;HRun=0;HaplotypeScore=84.5466;InbreedingCoeff=0.3137;MQ=38.04;MQ0=49;MQRankSum=-3.040;QD=0.79;ReadPosRankSum=1.468;VQSLOD=1.6472;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:42:81.24:0,81,1072	./.	./.	./.	0/0:1,0:1:0:0,0,0	0/0:18,0:18:21.49:0,21,277	0/0:23,0:20:33.10:0,33,442	0/0:15,0:12:25.97:0,26,370	0/0:13,0:13:5.88:0,6,55	./.	./.	0/0:15,0:15:26.82:0,27,349	0/0:13,0:12:20.96:0,21,261	0/0:11,0:11:5.16:0,5,25	./.	0/0:12,0:10:5.91:0,6,57	0/1:10,4:9:16.81:105,0,17	0/0:8,0:6:17.99:0,18,211	0/0:10,0:7:13.46:0,13,122	0/0:3,0:2:0:0,0,0	1/1:19,0:11:2.63:13,3,0	0/0:14,0:13:3.48:0,3,42	0/0:11,0:11:3.01:0,3,41	0/0:34,0:25:36.06:0,36,440	./.	./.	0/1:13,0:12:5.95:6,0,77	1/1:4,0:1:2.50:9,2,0
chr10	78406289	.	CCACACACACA	C	3196.83	PASS	AB=0.823;AC=34;AF=0.654;AN=52;BaseQRankSum=7.553;DP=548;FS=5.243;HRun=0;HaplotypeScore=160.6806;InbreedingCoeff=0.3221;MQ=70.21;MQ0=7;MQRankSum=-5.505;QD=8.81;ReadPosRankSum=3.686;VQSLOD=2.2925;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:24.07:0,24,890	1/1:3,0:4:3.01:30,3,0	0/0:32,0:25:6.02:0,6,107	0/0:24,0:18:6.02:0,6,72	1/1:9,7:17:2.75:89,3,0	0/0:21,0:22:21.07:0,21,746	0/0:27,0:29:39.61:0,40,1587	0/0:27,0:27:12.04:0,12,298	0/1:14,5:20:57.19:281,0,57	1/1:14,3:17:8.17:184,8,0	1/1:8,0:9:3.01:70,3,0	1/1:13,0:21:14.66:348,15,0	1/1:13,0:16:9.03:209,9,0	1/1:9,3:15:18.05:356,18,0	1/1:15,6:21:8.43:208,8,0	0/1:25,3:33:39.77:411,0,40	0/1:18,0:27:28.23:101,0,28	1/1:16,2:17:0.23:117,0,0	./.	1/1:12,0:15:6.02:138,6,0	1/1:23,0:22:0.47:1,0,0	./.	0/1:18,1:20:10.37:83,0,10	1/1:22,0:25:6.02:132,6,0	0/1:11,0:18:13.89:49,0,14	0/1:15,0:14:0:0,0,0	1/1:6,0:11:9.03:209,9,0	1/1:9,0:16:15.05:345,15,0
chr10	78408748	.	G	GGTAGGGAGGGAGGGAA	2497.27	PASS	AB=0.856;AC=10;AF=0.185;AN=54;BaseQRankSum=4.640;DP=256;FS=0.738;HRun=0;HaplotypeScore=107.7816;InbreedingCoeff=-0.0274;MQ=51.63;MQ0=10;MQRankSum=-5.596;QD=24.01;ReadPosRankSum=2.451;VQSLOD=1.5617;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:33.54:0,34,1067	0/0:3,0:2:5.99:0,6,50	0/0:12,0:5:5.13:0,5,98	0/0:17,0:10:13.12:0,13,267	0/0:2,0:2:5.99:0,6,50	0/0:26,0:26:72.12:0,72,2159	0/0:22,0:22:56.36:0,56,1359	0/0:8,0:7:7.95:0,8,83	0/0:4,0:4:6.46:0,6,50	0/0:6,0:6:12.02:0,12,114	0/0:5,0:5:11.75:0,12,98	0/1:13,0:31:67.46:922,0,67	0/1:17,0:17:6.10:871,0,6	0/0:1,0:1:0:0,0,0	0/1:4,0:3:20.21:29,0,20	0/0:8,0:7:15.47:0,15,137	0/0:4,0:4:5.97:0,6,45	0/1:6,0:5:9.21:40,0,9	0/0:4,0:3:8.92:0,9,66	0/1:5,0:5:16.10:16,0,33	0/0:9,0:8:11.55:0,12,78	0/1:10,0:10:27.89:342,0,28	0/1:5,1:10:10.98:205,0,11	0/1:4,0:17:55.96:196,0,56	1/1:3,0:3:2.44:11,2,0	0/0:6,0:5:9.97:0,10,65	./.	0/0:1,0:1:2.04:0,2,6
chr10	78408761	.	GGAAAA	G	151.93	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.224;DP=314;FS=4.803;HRun=0;HaplotypeScore=59.0403;InbreedingCoeff=0.5964;MQ=77.36;MQ0=7;MQRankSum=-2.331;QD=25.32;ReadPosRankSum=0.724;VQSLOD=2.8559;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:33.10:0,33,921	0/0:2,0:1:3.01:0,3,92	0/0:18,0:10:30.10:0,30,677	0/0:29,0:23:69.18:0,69,1805	0/0:3,0:3:6.02:0,6,168	0/0:24,0:23:69.21:0,69,1903	0/0:19,0:19:48.15:0,48,1360	0/0:14,0:14:39.13:0,39,1186	0/0:8,0:8:24.08:0,24,726	0/0:8,0:8:15.05:0,15,442	0/0:5,0:5:9.03:0,9,273	0/0:35,0:35:33.11:0,33,928	0/0:21,0:21:39.03:0,39,1037	0/0:2,0:2:6.02:0,6,182	0/0:7,0:7:18.06:0,18,501	0/0:10,0:10:27.09:0,27,810	0/0:4,0:4:9.03:0,9,271	0/0:6,0:6:9.03:0,9,265	0/0:8,0:7:21.07:0,21,576	0/0:6,0:6:12.04:0,12,349	0/0:13,0:12:30.10:0,30,875	0/0:16,0:16:31.35:0,31,862	0/0:10,0:9:17.99:0,18,421	0/0:16,0:16:12.04:0,12,322	0/0:3,0:3:6.02:0,6,129	1/1:0,5:5:12:193,12,0	0/0:7,0:7:21.07:0,21,614	1/1:0,1:1:3.01:61,3,0
chr10	78409536	.	T	TA	4085.69	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.925;DP=689;FS=1.785;HRun=3;HaplotypeScore=80.6843;InbreedingCoeff=0.9999;MQ=88.94;MQ0=0;MQRankSum=-0.891;QD=37.48;ReadPosRankSum=2.264;VQSLOD=4.0971;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1381	0/0:16,0:16:45.14:0,45,539	0/0:28,0:28:75.18:0,75,874	0/0:23,0:23:60.18:0,60,705	0/0:21,0:21:63.19:0,63,756	0/0:17,0:17:48.11:0,48,561	0/0:33,0:33:93.18:0,93,1094	0/0:20,0:20:54.15:0,54,630	0/0:21,0:21:63.19:0,63,756	0/0:27,0:27:78.24:0,78,935	0/0:20,0:20:51.16:0,51,611	1/1:1,18:20:48.16:669,48,0	1/1:2,27:29:81.27:1134,81,0	0/0:26,0:26:78.24:0,78,935	0/0:25,0:25:75.23:0,75,900	0/0:26,0:26:72.22:0,72,863	0/0:27,0:27:78.24:0,78,935	0/0:35,0:35:99:0,105,1245	0/0:29,0:29:75.21:0,75,879	0/0:24,0:24:72.20:0,72,851	0/0:46,0:46:99:0,132,1584	1/1:1,22:23:63.21:871,63,0	1/1:1,16:18:45.14:614,45,0	1/1:0,19:19:57.19:798,57,0	0/0:21,0:21:60.18:0,60,719	0/0:18,0:18:51.16:0,51,612	0/0:26,0:26:75.23:0,75,899	0/0:11,0:11:33.10:0,33,396
chr10	78410006	.	AGTGTGTGTGTGT	A	3400.23	PASS	AB=0.637;AC=12;AF=0.222;AN=54;BaseQRankSum=6.734;DP=690;FS=7.309;HRun=0;HaplotypeScore=244.6834;InbreedingCoeff=0.6080;MQ=62.06;MQ0=12;MQRankSum=-6.373;QD=21.39;ReadPosRankSum=0.918;VQSLOD=1.3524;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:40:81.75:0,82,4158	0/0:9,0:12:12.04:0,12,465	0/0:35,0:20:12.04:0,12,317	0/0:39,0:21:11.16:0,11,363	0/0:15,0:16:6.02:0,6,207	0/0:25,0:25:48.64:0,49,2686	0/0:27,0:27:45.15:0,45,2330	./.	1/1:7,19:27:14.67:375,15,0	0/0:29,0:30:63.20:0,63,2844	0/0:9,0:10:5.86:0,6,171	0/0:29,0:28:51.16:0,51,2640	0/0:21,0:24:39.13:0,39,2018	1/1:16,10:26:5.86:209,6,0	0/0:25,0:24:2.98:0,3,155	1/1:14,20:35:39.13:1357,39,0	1/1:8,7:15:6.01:308,6,0	0/0:16,0:17:30.10:0,30,1153	0/0:27,0:24:24.97:0,25,1154	0/0:11,0:13:33.10:0,33,1643	0/0:48,0:53:78.27:0,78,3700	0/0:22,0:23:45.61:0,46,2243	0/0:10,0:10:12.04:0,12,578	0/0:29,0:29:60.09:0,60,2892	1/1:9,10:19:4.23:43,4,0	0/1:13,16:30:99:1011,0,110	0/0:8,0:17:18.16:0,18,703	0/1:3,4:6:55.65:98,0,56
chr10	78410044	.	T	TGTGTGTGG	911.22	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=1.688;DP=574;FS=3.760;HRun=0;HaplotypeScore=195.5584;InbreedingCoeff=0.3616;MQ=50.55;MQ0=22;MQRankSum=-2.931;QD=6.56;ReadPosRankSum=-2.887;VQSLOD=2.2118;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:88.08:0,88,1757	0/0:5,0:5:6:0,6,51	0/0:30,0:7:20.90:0,21,172	0/0:40,0:18:22.86:0,23,197	0/0:10,4:15:8.69:0,9,81	0/0:24,0:24:57.25:0,57,1096	0/1:23,0:23:1.92:2,0,980	1/1:21,0:18:47.48:322,47,0	0/0:25,0:25:22.06:0,22,256	0/1:20,0:20:90.84:310,0,91	0/1:10,0:10:0:0,0,0	0/0:27,0:26:50.29:0,50,1159	0/0:20,0:20:35.52:0,36,679	0/0:13,0:13:11.95:0,12,199	0/1:15,0:15:44.21:44,0,191	0/0:24,0:24:48.13:0,48,925	0/0:17,0:16:32.72:0,33,342	1/1:10,1:12:16.60:322,17,0	0/0:18,0:17:0.50:0,1,254	0/0:14,0:15:26.06:0,26,279	0/1:37,0:35:48.95:49,0,500	0/0:23,0:23:53.91:0,54,971	0/0:12,0:12:31.60:0,32,359	0/0:28,0:28:44.92:0,45,1072	0/0:16,0:16:14.40:0,14,106	0/0:26,0:26:74.77:0,75,954	0/0:15,0:15:10.60:0,11,114	0/0:5,0:5:5.98:0,6,89
chr10	78410092	.	GACACAC	G	2370.59	PASS	AB=0.952;AC=23;AF=0.411;AN=56;BaseQRankSum=5.800;DP=567;FS=4.572;HRun=0;HaplotypeScore=180.9348;InbreedingCoeff=0.0981;MQ=52.24;MQ0=13;MQRankSum=-1.730;QD=8.38;ReadPosRankSum=3.997;VQSLOD=1.9908;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:35:96.26:0,96,2556	1/1:2,0:3:6.02:133,6,0	0/0:44,0:18:5.89:0,6,516	0/0:41,0:14:7.81:0,8,335	1/1:13,3:16:18.56:286,19,0	0/0:31,0:31:87.25:0,87,2353	0/0:21,0:21:54.19:0,54,1518	0/0:35,0:33:81.21:0,81,1651	0/1:19,0:19:33.76:34,0,237	0/1:19,4:23:60.15:477,0,60	1/1:1,2:3:2.37:8,2,0	0/0:12,0:12:3.01:0,3,35	0/1:14,0:15:24.45:24,0,317	0/1:20,1:19:99:134,0,140	0/1:17,0:18:11.50:369,0,12	0/1:23,0:23:45.35:45,0,352	1/1:10,2:12:4.71:340,5,0	0/1:13,0:13:25.14:25,0,45	0/1:14,0:14:57.85:177,0,58	1/1:19,0:18:4.77:24,5,0	0/1:22,1:21:11.86:12,0,19	0/0:16,0:14:7.79:0,8,194	0/0:13,0:13:21.06:0,21,481	0/1:19,0:19:0:0,0,0	0/1:14,3:17:85.98:139,0,86	0/0:22,0:22:60.09:0,60,1443	1/1:24,0:24:27.89:313,28,0	0/0:11,0:9:9.54:0,10,326
chr10	78410100	.	CACACAGAGAGAGAGAGAGAGAG	C	3856.15	PASS	AB=0.953;AC=20;AF=0.357;AN=56;BaseQRankSum=5.317;DP=533;FS=0.000;HRun=0;HaplotypeScore=268.1358;InbreedingCoeff=0.0626;MQ=51.94;MQ0=13;MQRankSum=-0.979;QD=15.18;ReadPosRankSum=-1.092;VQSLOD=1.3907;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:38:99:0,102,6510	0/1:4,0:4:25.23:36,0,25	0/0:35,0:13:29.90:0,30,345	0/0:29,0:9:1.51:0,2,207	0/1:17,0:17:61.80:62,0,621	0/0:32,0:32:84.24:0,84,6106	0/0:22,0:22:60.21:0,60,3473	0/0:31,0:29:84.22:0,84,1902	0/1:17,0:19:16.08:16,0,1932	0/1:21,0:20:99:106,0,1329	0/0:3,0:3:2.98:0,3,206	0/0:9,0:9:3.01:0,3,60	0/0:15,0:15:10.31:0,10,663	0/1:20,0:18:11.62:12,0,764	0/1:16,0:16:17.04:17,0,765	0/1:18,0:22:48.68:49,0,2096	0/1:10,0:10:49.36:49,0,656	0/1:1,0:10:45.07:118,0,45	1/1:5,12:16:20.05:974,20,0	1/1:1,18:18:7.78:193,8,0	1/1:5,17:20:3.01:87,3,0	0/0:15,0:13:10.85:0,11,236	0/0:13,0:13:19.14:0,19,560	1/1:16,0:16:0.26:0,0,0	0/1:17,0:17:16.76:17,0,1325	0/0:23,0:23:57.19:0,57,1818	1/1:0,22:24:39.13:2120,39,0	0/0:8,0:6:15.05:0,15,765
chr10	78410104	.	C	CACACAGAGAGAGAG	4003.20	PASS	AB=0.962;AC=24;AF=0.429;AN=56;BaseQRankSum=1.458;DP=566;FS=8.314;HRun=0;HaplotypeScore=235.2644;InbreedingCoeff=0.1018;MQ=49.31;MQ0=14;MQRankSum=-6.032;QD=11.64;ReadPosRankSum=-4.378;VQSLOD=0.4120;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:93.28:0,93,2642	0/0:3,0:3:6.01:0,6,56	0/0:34,0:11:25.19:0,25,231	0/0:29,0:7:15.24:0,15,178	0/1:17,0:17:99:102,0,135	0/0:33,0:33:86.60:0,87,2035	0/0:24,0:24:63.18:0,63,1563	1/1:31,0:29:68.07:826,68,0	0/1:21,0:20:14.97:15,0,400	0/1:20,0:19:99:290,0,169	0/0:4,0:4:2.98:0,3,21	1/1:5,0:16:3.01:32,3,0	1/1:23,0:23:39.57:900,40,0	0/1:20,0:18:99:195,0,150	0/1:21,0:21:44.38:44,0,172	0/0:23,0:23:27.41:0,27,432	0/0:10,0:10:26.94:0,27,280	0/1:10,0:10:48.31:83,0,48	0/1:15,0:14:39.80:40,0,139	0/1:19,0:18:29.49:43,0,29	0/0:21,0:19:2.98:0,3,21	1/1:18,0:15:8.73:169,9,0	1/1:15,0:15:18.75:208,19,0	0/1:3,11:17:0.23:0,0,0	0/1:21,0:21:34.13:34,0,217	1/1:21,0:25:5.86:709,6,0	0/1:24,0:24:56:309,0,56	0/1:11,0:9:2.15:2,0,2
chr10	78411468	.	C	CGTTATT	22663.46	PASS	AB=0.524;AC=23;AF=0.411;AN=56;BaseQRankSum=-7.067;DP=663;FS=0.951;HRun=0;HaplotypeScore=135.7303;InbreedingCoeff=0.9215;MQ=84.05;MQ0=0;MQRankSum=-17.708;QD=89.58;ReadPosRankSum=-1.653;VQSLOD=6.0150;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,2816	1/1:1,7:9:23.74:770,24,0	0/0:29,0:29:87.23:0,87,1977	0/0:20,0:20:50.33:0,50,1136	1/1:3,25:29:81.28:2692,81,0	0/0:20,0:20:60.19:0,60,1480	0/0:24,0:24:69.24:0,69,1761	0/0:18,0:18:54.16:0,54,1231	0/0:22,0:22:66.21:0,66,1617	1/1:0,18:19:54.17:1903,54,0	1/1:3,10:15:36.12:1056,36,0	0/0:23,0:23:69.24:0,69,1729	0/0:26,0:26:78.25:0,78,1941	0/0:30,0:30:90.31:0,90,2258	1/1:3,24:29:78.27:2822,78,0	0/0:36,0:36:99:0,108,2686	0/0:25,0:25:75.26:0,75,1841	0/1:1,8:11:55.71:654,0,56	1/1:5,8:18:54.19:1685,54,0	1/1:8,22:34:99:3121,102,0	1/1:4,17:24:51.13:1508,51,0	0/0:29,0:29:84.23:0,84,2090	0/0:17,0:17:51.17:0,51,1274	0/0:20,0:19:60.21:0,60,1538	0/0:32,0:32:96.32:0,96,2367	1/1:0,24:27:81.26:2845,81,0	1/1:3,25:34:87.30:3158,87,0	1/1:0,4:4:12.04:449,12,0
chr10	78414134	.	C	CA	1722.13	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.468;DP=662;FS=19.096;HRun=1;HaplotypeScore=72.2384;InbreedingCoeff=0.9942;MQ=86.63;MQ0=0;MQRankSum=-9.390;QD=30.21;ReadPosRankSum=-2.634;VQSLOD=1.6236;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,138,1893	0/0:11,0:11:33.11:0,33,460	0/0:29,0:29:84.25:0,84,1124	0/0:16,0:16:45.06:0,45,594	0/0:22,0:22:60.20:0,60,838	0/0:27,0:27:78.23:0,78,1066	0/0:20,0:20:60.16:0,60,796	0/0:28,0:28:81.27:0,81,1127	0/0:21,0:21:63.20:0,63,862	0/0:31,0:31:93.14:0,93,1271	0/0:24,0:24:69.23:0,69,965	0/0:26,0:26:72.23:0,72,989	0/0:30,0:30:87.29:0,87,1216	0/0:25,0:25:75.22:0,75,1027	0/0:36,0:36:99:0,105,1468	0/0:33,0:33:99:0,99,1380	0/0:29,0:29:84.17:0,84,1110	1/1:0,7:7:15.05:219,15,0	1/1:0,12:12:36.12:522,36,0	1/1:0,8:8:18.06:264,18,0	1/1:0,18:18:33.11:476,33,0	0/0:29,0:29:87.29:0,87,1216	0/0:19,0:19:57.19:0,57,795	0/0:26,0:26:78.26:0,78,1090	0/0:26,0:26:75.25:0,75,1045	0/0:32,0:32:96.32:0,96,1340	1/1:2,10:12:30.56:414,31,0	0/0:16,0:16:48.16:0,48,669
chr10	78414616	.	ATAACTAAGG	A	971.98	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.986;DP=605;FS=7.461;HRun=0;HaplotypeScore=190.9703;InbreedingCoeff=0.9008;MQ=88.13;MQ0=0;MQRankSum=-4.798;QD=51.16;ReadPosRankSum=-0.311;VQSLOD=2.7396;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,3758	0/0:8,0:8:24.07:0,24,1031	0/0:40,0:40:99:0,114,4740	0/0:28,0:28:72.12:0,72,2451	0/0:11,0:11:27.08:0,27,1103	0/0:17,0:17:42.10:0,42,1621	0/0:17,0:17:51.16:0,51,2164	0/0:33,0:33:90.27:0,90,3553	0/0:20,0:20:57.12:0,57,2138	0/0:15,0:15:42.14:0,42,1876	0/0:15,0:15:39.13:0,39,1854	0/0:23,0:23:66.20:0,66,2761	0/0:33,0:33:99:0,99,4188	0/0:26,0:26:75.22:0,75,3205	0/0:23,0:23:69.20:0,69,2800	0/0:32,0:32:96.29:0,96,4062	0/0:33,0:33:93.32:0,93,4184	0/0:18,0:18:45.11:0,45,1781	0/0:16,0:16:42.14:0,42,1669	0/0:24,0:24:66.14:0,66,2731	0/0:29,0:29:78.23:0,78,3567	0/0:15,0:15:45.15:0,45,2073	0/0:11,0:11:30.10:0,30,1260	0/0:27,0:27:69.24:0,69,3141	0/0:16,0:16:45.13:0,45,1897	1/1:1,14:15:42.01:990,42,0	0/0:21,0:21:63.19:0,63,2837	1/1:0,4:4:3.01:91,3,0
chr10	78416816	.	T	TA	7946.24	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-4.851;DP=734;FS=2.625;HRun=10;HaplotypeScore=80.4828;InbreedingCoeff=0.9812;MQ=74.20;MQ0=0;MQRankSum=-1.389;QD=18.10;ReadPosRankSum=1.703;VQSLOD=5.7162;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:73.90:0,74,592	1/1:7,12:19:33.03:339,33,0	0/0:12,0:12:19.90:0,20,145	0/0:14,0:14:29.91:0,30,239	1/1:4,24:29:50.53:732,51,0	0/0:26,0:27:58.02:0,58,532	0/0:20,0:21:26.60:0,27,349	0/0:42,0:42:89.86:0,90,737	1/1:3,3:23:40.03:226,40,0	1/1:11,31:42:90.18:937,90,0	1/1:5,19:24:27.25:452,27,0	1/1:6,20:26:23.36:432,23,0	1/1:4,21:25:29.49:519,29,0	1/1:3,0:14:20.15:112,20,0	1/1:6,28:34:75.19:800,75,0	1/1:5,0:31:68.51:364,69,0	1/1:3,2:29:63.12:355,63,0	0/0:34,0:34:75.91:0,76,693	0/0:21,0:21:53.91:0,54,440	0/0:24,0:25:52.89:0,53,421	0/0:27,0:27:71.89:0,72,588	1/1:6,14:20:17.46:391,17,0	1/1:2,18:20:48.12:512,48,0	1/1:7,22:29:38.51:615,39,0	1/1:1,0:25:51.34:261,51,0	1/1:10,24:35:6.92:540,7,0	0/0:39,0:40:88.85:0,89,713	1/1:2,12:14:14.46:359,14,0
chr10	78416998	.	AGGACAGC	A	2050.63	PASS	AB=0.519;AC=3;AF=0.054;AN=56;BaseQRankSum=8.370;DP=687;FS=0.000;HRun=0;HaplotypeScore=156.3037;InbreedingCoeff=0.5460;MQ=78.01;MQ0=0;MQRankSum=-7.813;QD=66.15;ReadPosRankSum=-0.060;VQSLOD=3.7623;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,4020	0/0:7,0:7:21.07:0,21,847	0/0:16,0:16:48.16:0,48,1695	0/0:16,0:16:44.94:0,45,1339	0/0:17,0:17:48.16:0,48,1791	0/0:19,0:19:54.19:0,54,2123	0/0:36,0:36:99:0,102,3775	0/0:30,0:30:87.29:0,87,3178	0/0:19,0:19:54.19:0,54,2032	0/0:27,0:27:75.26:0,75,2859	0/0:9,0:9:24.08:0,24,897	0/0:29,0:29:84.29:0,84,3266	0/0:28,0:28:81.28:0,81,3156	0/0:29,0:29:87.30:0,87,3488	0/0:46,0:46:99:0,135,5415	0/0:33,0:33:96.25:0,96,3541	0/0:37,0:37:99:0,111,4435	0/0:31,0:31:90.31:0,90,3469	0/0:20,0:20:57.20:0,57,2168	0/0:12,0:12:33.11:0,33,1225	0/0:54,0:54:99:0,150,5778	0/0:19,0:19:51.17:0,51,1919	0/0:10,0:10:30.10:0,30,1206	0/0:34,0:34:99:0,102,4102	0/0:19,0:19:54.19:0,54,2104	0/1:2,26:28:36.91:1987,0,37	0/0:24,0:24:72.22:0,72,2520	1/1:1,2:3:6.02:158,6,0
chr10	78421183	.	C	CA	3094.07	PASS	AB=0.680;AC=15;AF=0.268;AN=56;BaseQRankSum=-7.218;DP=544;FS=1.234;HRun=10;HaplotypeScore=63.2565;InbreedingCoeff=0.7979;MQ=75.63;MQ0=0;MQRankSum=-2.389;QD=16.28;ReadPosRankSum=-4.102;VQSLOD=2.9089;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,2:25:1.06:1,0,405	0/0:8,0:8:17.98:0,18,148	0/0:13,0:13:26.71:0,27,204	0/0:14,0:18:35.35:0,35,213	0/0:19,0:19:50.94:0,51,418	0/0:16,0:17:46.96:0,47,372	0/0:31,0:31:83.88:0,84,686	1/1:7,0:32:73.98:378,74,0	0/0:17,0:17:47.93:0,48,394	0/0:15,0:15:41.93:0,42,340	0/0:12,0:12:26.90:0,27,221	0/0:19,0:19:50.89:0,51,413	0/0:28,0:28:68.91:0,69,566	0/0:23,0:23:56.89:0,57,468	0/0:15,0:15:38.92:0,39,320	0/0:26,0:26:62.90:0,63,517	0/0:16,1:17:16.92:0,17,293	0/1:6,15:21:12.73:285,0,13	1/1:6,15:23:53.94:544,54,0	1/1:3,12:15:11.45:327,11,0	1/1:4,13:17:36.09:384,36,0	0/0:19,0:19:44.90:0,45,364	0/0:15,0:15:41.94:0,42,345	0/0:22,0:22:22.12:0,22,335	0/0:20,0:20:47.92:0,48,390	0/1:2,16:18:1.13:390,0,1	1/1:4,28:31:78.06:814,78,0	1/1:0,6:6:15.04:160,15,0
chr10	78422130	.	TACAC	T	2335.25	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=3.359;DP=615;FS=2.716;HRun=0;HaplotypeScore=114.6838;InbreedingCoeff=0.8918;MQ=70.25;MQ0=4;MQRankSum=-1.992;QD=17.43;ReadPosRankSum=3.444;VQSLOD=3.2263;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:24.06:0,24,430	0/0:6,0:12:24.08:0,24,454	0/0:36,0:24:2.98:0,3,21	0/0:34,0:23:3.01:0,3,71	0/0:16,0:24:23.80:0,24,354	0/0:21,0:21:30.10:0,30,669	0/0:22,0:22:24.06:0,24,501	0/0:28,0:30:11.41:0,11,82	1/1:7,14:21:24.08:378,24,0	0/0:13,0:23:49:0,49,824	0/0:8,0:19:23.82:0,24,398	0/0:16,0:16:30.10:0,30,608	0/0:21,0:23:17.80:0,18,352	1/1:9,8:17:18.06:283,18,0	1/1:11,13:25:18.16:527,18,0	1/1:9,16:26:42.13:642,42,0	1/1:15,13:28:24.08:378,24,0	0/0:10,0:18:15.05:0,15,280	0/0:15,0:13:18.06:0,18,325	0/0:18,0:26:11.07:0,11,173	0/0:20,0:20:18.03:0,18,276	0/0:15,0:15:27.08:0,27,566	0/0:24,0:24:32.87:0,33,659	0/0:18,0:18:33.11:0,33,739	1/1:7,9:17:21.06:311,21,0	0/0:27,0:26:45.15:0,45,930	0/0:17,0:23:18.53:0,19,302	0/0:8,0:13:9.03:0,9,175
chr10	78422809	.	TG	T	4965.18	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.701;DP=820;FS=18.834;HRun=1;HaplotypeScore=83.7392;InbreedingCoeff=0.9929;MQ=87.62;MQ0=0;MQRankSum=-2.156;QD=39.41;ReadPosRankSum=3.235;VQSLOD=3.1034;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,175,2679	0/0:4,0:4:12.04:0,12,192	0/0:34,0:33:82.66:0,83,1316	0/0:31,0:31:93.31:0,93,1431	0/0:20,0:20:60.19:0,60,932	0/0:30,0:30:90.26:0,90,1361	0/0:29,0:29:87.30:0,87,1388	0/0:39,0:39:99:0,114,1736	0/0:27,0:27:81.24:0,81,1246	0/0:18,0:18:54.17:0,54,822	0/0:17,0:17:51.11:0,51,719	1/1:1,34:35:99:1378,99,0	1/1:0,24:24:69.23:965,69,0	0/0:40,0:40:99:0,117,1819	0/0:51,0:51:99:0,153,2351	0/0:39,0:39:99:0,117,1768	0/0:39,0:39:99:0,117,1841	0/0:17,0:17:48.13:0,48,740	0/0:22,0:22:66.22:0,66,1034	0/0:32,1:33:57.33:0,57,1417	0/0:48,0:48:99:0,135,2060	1/1:0,16:16:48.16:671,48,0	1/1:0,23:23:63.68:882,64,0	1/1:0,28:28:78.22:1069,78,0	0/0:20,0:20:53.94:0,54,724	0/0:37,0:37:99:0,108,1717	0/0:25,0:24:72.23:0,72,1126	0/0:15,0:15:45.12:0,45,671
chr10	78423731	.	A	AGCTGCTGCTGCT	2787.68	PASS	AC=10;AF=0.333;AN=30;BaseQRankSum=6.385;DP=337;FS=6.742;HRun=0;HaplotypeScore=219.4343;InbreedingCoeff=0.9527;MQ=69.46;MQ0=0;MQRankSum=-3.764;QD=34.85;ReadPosRankSum=-2.927;VQSLOD=2.1624;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,126,4235	./.	0/0:17,0:13:33.58:0,34,1070	0/0:18,0:16:33.08:0,33,807	./.	0/0:25,0:25:72.25:0,72,2554	0/0:20,0:20:57.20:0,57,1984	./.	./.	./.	./.	1/1:16,3:15:15.05:832,15,0	1/1:6,7:13:12:559,12,0	./.	./.	./.	./.	0/0:24,0:24:66.23:0,66,2383	0/0:19,0:19:54.13:0,54,1536	0/0:38,0:38:99:0,111,3690	0/0:26,0:26:75.26:0,75,2707	1/1:13,0:13:23.88:724,24,0	1/1:24,0:24:18.04:522,18,0	1/1:10,0:10:6.02:290,6,0	./.	./.	0/0:22,0:22:57.20:0,57,1948	./.
chr10	78423869	.	CCA	C	2052.21	PASS	AB=0.934;AC=28;AF=0.519;AN=54;BaseQRankSum=3.090;DP=624;FS=7.297;HRun=0;HaplotypeScore=121.4133;InbreedingCoeff=0.2123;MQ=63.25;MQ0=26;MQRankSum=1.260;QD=4.87;ReadPosRankSum=4.006;VQSLOD=2.4201;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,2:40:24.35:24,0,904	0/0:3,0:7:7.55:0,8,56	./.	0/0:39,0:23:3.44:0,3,20	0/1:14,2:33:3.45:3,0,445	0/1:15,0:15:27.43:27,0,293	0/1:17,4:21:76.16:76,0,160	0/0:20,0:14:4.63:0,5,14	1/1:11,1:12:11.87:115,12,0	0/0:15,0:18:21.92:0,22,240	0/0:9,1:14:18.12:0,18,175	0/1:13,0:22:14.57:15,0,52	0/0:10,0:18:5.94:0,6,42	1/1:12,11:23:32.92:348,33,0	0/1:11,0:18:5.45:5,0,218	1/1:11,15:26:29.60:317,30,0	0/1:5,9:15:18.84:210,0,19	1/1:11,15:26:22.88:308,23,0	1/1:11,0:12:8.35:42,8,0	1/1:16,0:26:19.88:98,20,0	1/1:14,0:20:11.36:56,11,0	0/1:14,0:18:41.09:41,0,46	0/1:12,0:28:17.41:17,0,53	0/0:30,0:36:7.46:0,7,91	1/1:12,9:24:32.84:324,33,0	0/0:12,0:12:12.82:0,13,86	1/1:6,0:25:39.79:200,40,0	0/1:1,0:4:6.41:6,0,20
chr10	78426707	.	C	CACACACACACACACAT	2705.62	PASS	AB=0.837;AC=26;AF=0.500;AN=52;BaseQRankSum=-1.837;DP=558;FS=16.987;HRun=0;HaplotypeScore=227.7861;InbreedingCoeff=0.1608;MQ=36.66;MQ0=27;MQRankSum=-3.148;QD=7.39;ReadPosRankSum=-2.379;VQSLOD=1.0598;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:31:6.01:6,0,388	0/1:7,0:7:10.97:87,0,11	./.	./.	0/1:13,0:13:17.95:21,0,18	0/0:21,0:21:13.25:0,13,614	0/0:23,0:22:9.91:0,10,345	1/1:31,0:29:16.15:346,16,0	1/1:16,0:14:12.01:336,12,0	1/1:13,0:24:1.18:616,1,0	0/1:14,0:14:0.14:0,0,0	0/0:22,0:22:2.92:0,3,17	0/0:14,0:13:8.04:0,8,46	1/1:21,0:20:7.94:222,8,0	0/1:23,0:20:0.32:0,0,1	1/1:26,0:24:7:733,7,0	1/1:6,6:16:6.42:227,6,0	0/1:8,0:19:7.80:8,0,205	0/1:6,0:14:78.97:79,0,134	0/1:7,0:24:17.37:19,0,17	0/0:12,0:28:6.70:0,7,49	0/0:19,0:19:2.92:0,3,89	1/1:15,0:13:3.24:19,3,0	0/1:20,0:19:18.57:19,0,123	1/1:20,0:18:5.84:38,6,0	0/0:24,0:24:48.71:0,49,655	0/1:4,0:24:88.56:89,0,94	0/0:11,0:10:14.19:0,14,228
chr10	78426718	.	ACT	A	584.68	PASS	AB=0.998;AC=31;AF=0.596;AN=52;BaseQRankSum=1.036;DP=514;FS=13.623;HRun=0;HaplotypeScore=159.0924;InbreedingCoeff=-0.0764;MQ=35.40;MQ0=21;MQRankSum=2.212;QD=1.35;ReadPosRankSum=0.005;VQSLOD=1.9545;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:30:33.43:104,0,33	1/1:7,0:7:1.82:5,2,0	./.	./.	1/1:12,0:12:8.77:62,9,0	0/1:21,0:21:72.56:98,0,73	0/0:15,6:20:11.71:0,12,142	0/1:33,0:31:12.77:13,0,436	1/1:16,0:14:5.99:49,6,0	0/1:24,0:23:58.19:58,0,136	1/1:15,0:15:0.26:1,0,0	0/0:22,0:22:2.15:0,2,18	0/0:14,0:13:11.97:0,12,67	0/1:20,0:19:3.80:4,0,13	0/1:21,0:18:0:0,0,0	0/1:27,0:25:8.38:34,0,8	0/1:8,0:8:7.70:13,0,8	0/1:18,0:16:10.25:10,0,127	0/1:16,0:15:44.02:44,0,168	0/1:26,0:26:18.61:19,0,33	0/1:28,0:25:9.08:9,0,47	1/1:18,0:18:0.26:1,0,0	1/1:16,0:13:3.41:19,3,0	0/1:18,0:17:6.91:18,0,7	1/1:21,0:19:6.44:47,6,0	1/1:23,0:23:12.97:101,13,0	0/0:22,0:21:14.49:0,14,216	1/1:10,0:9:4.74:19,5,0
chr10	78426723	.	CAGAGAGAGAGAGAGAG	C	162.97	PASS	AB=0.723;AC=6;AF=0.120;AN=50;BaseQRankSum=1.798;DP=479;FS=0.000;HRun=0;HaplotypeScore=199.8858;InbreedingCoeff=0.3890;MQ=35.78;MQ0=18;MQRankSum=-1.236;QD=2.33;ReadPosRankSum=-0.405;VQSLOD=2.3535;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:29:18.01:0,18,1048	0/0:6,0:6:3.01:0,3,219	./.	./.	0/0:12,0:13:11.99:0,12,663	0/0:20,0:20:20.94:0,21,1121	0/0:23,0:22:5.25:0,5,139	0/0:32,0:29:24.04:0,24,544	0/0:11,0:12:2.79:0,3,48	0/0:22,0:21:32.89:0,33,1533	0/0:15,0:15:3.01:0,3,204	0/1:12,7:20:0:0,0,0	1/1:12,2:13:6.02:241,6,0	0/0:18,0:20:2.83:0,3,38	0/0:20,0:18:3.01:0,3,220	0/0:12,0:19:6.02:0,6,71	0/0:6,0:7:0.89:0,1,2	0/0:16,0:16:10.36:0,10,101	0/0:15,0:14:21.07:0,21,1064	0/0:22,0:22:6.17:0,6,107	0/0:31,0:27:15.05:0,15,647	1/1:6,10:17:1.82:5,2,0	./.	0/1:12,7:18:0.31:0,0,0	0/0:14,0:13:3.01:0,3,167	0/0:21,0:22:36.12:0,36,1390	0/0:20,0:19:12.04:0,12,547	0/0:8,0:8:12.04:0,12,378
chr10	78427666	.	CCCAACCACGGTT	C	8314.84	PASS	AB=0.554;AC=7;AF=0.125;AN=56;BaseQRankSum=13.539;DP=772;FS=6.435;HRun=0;HaplotypeScore=260.6704;InbreedingCoeff=0.8359;MQ=83.05;MQ0=0;MQRankSum=-13.690;QD=72.94;ReadPosRankSum=2.801;VQSLOD=3.9714;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,172,10002	0/0:12,0:12:36.12:0,36,2036	0/0:20,0:20:54.18:0,54,2324	0/0:30,0:30:70.08:0,70,3965	0/0:30,0:30:87.30:0,87,5181	0/0:21,0:21:63.22:0,63,3752	0/0:25,0:25:75.26:0,75,4574	0/0:30,0:30:81.27:0,81,4307	1/1:6,24:30:57.20:2144,57,0	0/0:35,0:34:99:0,99,5792	0/0:16,0:16:45.15:0,45,2478	0/0:36,0:36:99:0,105,6254	0/0:28,0:28:81.24:0,81,4632	0/1:6,25:31:99:2633,0,110	0/0:31,0:31:90.31:0,90,5375	1/1:7,26:33:66.23:2481,66,0	1/1:5,15:20:30.10:1057,30,0	0/0:18,0:18:54.19:0,54,3316	0/0:11,0:11:33.11:0,33,1947	0/0:20,0:20:57.18:0,57,3238	0/0:48,0:48:99:0,141,8489	0/0:27,0:27:81.28:0,81,4626	0/0:26,0:26:78.27:0,78,4698	0/0:33,0:33:93.32:0,93,5581	0/0:27,0:27:78.27:0,78,4649	0/0:31,0:31:87.29:0,87,4958	0/0:35,0:35:99:0,99,6010	0/0:8,0:8:24.08:0,24,1455
chr10	78428769	.	C	CA	4056.31	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=4.662;DP=666;FS=4.613;HRun=1;HaplotypeScore=212.2449;InbreedingCoeff=0.9160;MQ=79.95;MQ0=0;MQRankSum=-9.664;QD=30.73;ReadPosRankSum=-2.480;VQSLOD=2.4681;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,1696	0/0:7,0:7:8.96:0,9,36	0/0:24,0:24:62.94:0,63,743	0/0:15,0:15:39.06:0,39,463	0/0:38,0:38:54.13:0,54,256	0/0:16,0:16:48.16:0,48,623	0/0:30,0:30:90.29:0,90,1168	1/1:3,26:29:75.62:976,76,0	0/0:15,0:15:26.85:0,27,147	0/0:28,0:27:51.75:0,52,344	0/0:20,0:20:30.02:0,30,183	1/1:4,18:23:57.19:746,57,0	1/1:3,20:23:60.65:778,61,0	0/0:25,0:25:10.97:0,11,170	0/0:33,0:33:50:0,50,289	0/0:32,0:32:41.41:0,41,244	0/0:22,0:22:17.54:0,18,127	0/0:20,0:20:37.53:0,38,152	0/0:29,0:29:55.82:0,56,322	0/0:23,0:23:26.83:0,27,149	0/0:24,0:24:22.34:0,22,127	1/1:1,19:20:51.64:665,52,0	1/1:3,18:21:23.31:534,23,0	1/1:1,10:11:27.09:357,27,0	0/0:20,0:20:33.13:0,33,172	0/0:30,0:30:47.65:0,48,301	0/0:37,0:37:53.87:0,54,256	0/1:5,0:5:1.94:2,0,23
chr10	78428771	.	G	GA	18408.53	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=14.896;DP=668;FS=17.117;HRun=2;HaplotypeScore=162.2493;InbreedingCoeff=0.9940;MQ=80.52;MQ0=0;MQRankSum=-7.540;QD=34.22;ReadPosRankSum=5.007;VQSLOD=2.5813;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,1573	1/1:0,7:7:18.06:248,18,0	0/0:23,0:23:69.11:0,69,798	0/0:16,0:17:29.76:0,30,428	1/1:3,36:39:78.22:1054,78,0	0/0:16,0:16:48.15:0,48,595	0/0:30,0:30:90.27:0,90,1103	1/1:29,0:29:78.24:1014,78,0	1/1:1,14:15:36.12:493,36,0	1/1:2,25:26:72.24:980,72,0	1/1:1,20:21:57.15:765,57,0	1/1:22,0:22:57.19:749,57,0	1/1:23,0:23:60.18:764,60,0	1/1:1,23:24:66.22:907,66,0	1/1:2,32:34:87.29:1199,87,0	1/1:1,31:32:93.31:1276,93,0	1/1:1,21:22:57.19:780,57,0	1/1:1,20:21:51.17:700,51,0	1/1:5,26:31:80.63:1074,81,0	1/1:0,22:22:63.17:843,63,0	1/1:1,22:23:51.17:699,51,0	1/1:20,0:20:51.64:672,52,0	1/1:20,0:20:42.14:555,42,0	1/1:11,0:11:27.09:358,27,0	1/1:2,20:22:45.15:612,45,0	1/1:1,29:30:87.29:1191,87,0	1/1:1,35:36:93.31:1270,93,0	1/1:2,5:7:15.05:207,15,0
chr10	78431580	.	GA	G	7619.57	PASS	AB=0.933;AC=38;AF=0.679;AN=56;BaseQRankSum=12.286;DP=662;FS=2.768;HRun=11;HaplotypeScore=76.4420;InbreedingCoeff=0.8365;MQ=80.92;MQ0=0;MQRankSum=-2.652;QD=16.82;ReadPosRankSum=3.526;VQSLOD=5.8611;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:98.64:0,99,1225	1/1:1,9:10:20.95:169,21,0	0/1:26,2:26:35.08:35,0,183	0/1:13,1:14:16.13:16,0,47	1/1:8,28:36:71.86:591,72,0	0/0:36,0:37:99:0,99,1030	0/0:22,1:23:38.44:0,38,594	1/1:8,25:34:44.94:565,45,0	1/1:3,19:22:47.93:394,48,0	1/1:4,22:26:62.90:515,63,0	1/1:5,20:25:50.90:419,51,0	1/1:4,17:21:31.17:417,31,0	1/1:3,16:19:47.94:394,48,0	1/1:2,11:13:29.95:246,30,0	1/1:6,19:25:27.93:436,28,0	1/1:4,27:31:71.88:591,72,0	1/1:2,20:22:29.76:395,30,0	0/0:8,0:8:21.05:0,21,224	0/0:19,0:20:44.88:0,45,448	0/0:26,0:26:75.18:0,75,790	0/0:23,0:23:63.16:0,63,671	1/1:5,18:23:50.92:418,51,0	1/1:6,16:23:52.97:424,53,0	1/1:3,18:21:53.93:443,54,0	1/1:5,20:25:56.91:468,57,0	1/1:4,20:25:29.94:437,30,0	0/0:27,0:27:72.16:0,72,759	1/1:0,10:10:29.97:246,30,0
chr10	78431637	.	G	GAATTC	11068.24	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-5.447;DP=744;FS=7.698;HRun=0;HaplotypeScore=141.0771;InbreedingCoeff=0.9967;MQ=89.68;MQ0=0;MQRankSum=-9.656;QD=75.29;ReadPosRankSum=-3.391;VQSLOD=5.5814;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,123,2564	0/0:12,0:12:30.10:0,30,630	0/0:29,0:29:72.24:0,72,1495	0/0:37,0:37:98.87:0,99,1757	0/0:27,0:27:78.25:0,78,1633	0/0:34,0:34:96.31:0,96,2026	0/0:29,0:29:81.25:0,81,1635	1/1:16,23:40:99:3400,115,0	0/0:24,0:24:66.23:0,66,1431	0/0:39,0:39:99:0,111,2327	0/0:23,0:23:63.21:0,63,1324	1/1:2,16:20:54.19:1657,54,0	1/1:3,20:26:66.23:2054,66,0	0/0:14,0:14:42.14:0,42,912	0/0:23,0:23:69.24:0,69,1466	0/0:29,0:29:84.24:0,84,1642	0/0:23,0:23:63.22:0,63,1327	0/0:11,0:11:15.37:0,15,634	0/0:30,0:30:84.27:0,84,1719	0/0:31,0:31:89.65:0,90,1953	0/0:48,0:48:99:0,144,3044	1/1:2,16:19:51.16:1420,51,0	1/1:4,23:27:66.23:1917,66,0	1/1:8,7:15:30.04:620,30,0	0/0:19,0:19:48.16:0,48,1041	0/0:28,0:28:84.29:0,84,1812	0/0:31,0:31:90.31:0,90,1920	0/0:11,0:11:30.10:0,30,611
chr10	78432100	.	G	GA	1312.98	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=3.264;DP=516;FS=1.239;HRun=7;HaplotypeScore=117.2914;InbreedingCoeff=0.9026;MQ=52.62;MQ0=8;MQRankSum=-7.352;QD=14.59;ReadPosRankSum=-2.032;VQSLOD=2.7856;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,102,982	0/0:11,0:11:27.04:0,27,260	0/0:25,0:12:17.78:0,18,164	0/0:32,0:12:26.02:0,26,223	0/0:12,0:12:24:0,24,223	0/0:20,0:20:57.05:0,57,540	0/0:15,0:15:26.98:0,27,328	1/1:8,16:22:54.07:610,54,0	0/0:14,0:14:26.90:0,27,249	0/0:19,0:18:47.99:0,48,441	0/0:14,0:13:24.02:0,24,224	1/1:4,9:12:22.62:257,23,0	1/1:7,8:13:18.06:217,18,0	0/0:8,0:8:18:0,18,166	0/0:32,0:32:60.01:0,60,570	0/0:20,0:20:42.04:0,42,397	0/0:31,0:31:53.85:0,54,507	0/0:19,0:18:35.97:0,36,336	0/0:18,0:17:30:0,30,284	0/0:17,0:17:27.85:0,28,253	0/0:4,0:4:6.01:0,6,58	1/1:3,6:9:9.03:106,9,0	1/1:8,7:15:18.47:189,18,0	1/1:8,6:13:11.37:114,11,0	0/0:16,0:16:36.05:0,36,345	0/0:17,0:17:36.05:0,36,347	0/0:27,0:27:44.72:0,45,430	0/0:13,0:13:0.34:0,0,169
chr10	78432123	.	AAAG	A	3002.30	PASS	AB=0.993;AC=32;AF=0.571;AN=56;BaseQRankSum=0.406;DP=544;FS=11.656;HRun=0;HaplotypeScore=127.2522;InbreedingCoeff=0.1192;MQ=62.22;MQ0=10;MQRankSum=-1.692;QD=7.41;ReadPosRankSum=-5.080;VQSLOD=0.2932;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:75.66:0,76,1534	1/1:12,1:13:32.85:234,33,0	0/1:24,0:10:4.63:5,0,186	0/1:26,0:15:0.69:1,0,163	1/1:16,0:16:26.67:222,27,0	0/0:20,0:20:51.07:0,51,847	0/0:15,0:15:26.95:0,27,480	1/1:10,19:25:60.24:664,60,0	0/1:16,0:16:9.42:9,0,242	1/1:26,0:26:61.41:369,61,0	1/1:20,0:19:35.46:198,35,0	0/1:14,0:14:23.51:134,0,24	0/0:16,0:14:0.74:0,1,6	0/1:12,0:12:35.60:149,0,36	1/1:27,0:27:62.27:358,62,0	0/0:18,0:18:20.07:0,20,246	0/0:27,0:26:1.56:0,2,377	0/1:17,0:16:28.43:28,0,150	0/1:20,0:17:31:31,0,86	0/1:16,0:16:23.61:24,0,170	0/1:6,0:6:16.14:16,0,26	1/1:13,0:12:3.70:13,4,0	0/1:12,0:12:6.44:6,0,19	0/1:10,1:10:19.91:43,0,20	1/1:21,0:21:36.47:195,36,0	1/1:20,0:20:53.29:369,53,0	0/1:35,0:34:60.97:61,0,286	1/1:11,0:11:11.19:52,11,0
chr10	78432124	.	AAG	A	5687.67	PASS	AB=0.993;AC=40;AF=0.714;AN=56;BaseQRankSum=-0.516;DP=543;FS=15.041;HRun=0;HaplotypeScore=109.8982;InbreedingCoeff=0.2169;MQ=62.33;MQ0=10;MQRankSum=-1.397;QD=12.84;ReadPosRankSum=-5.339;VQSLOD=2.2143;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:54.35:0,54,1187	1/1:9,5:14:39:396,39,0	0/1:25,0:11:8.76:9,0,150	0/0:27,0:16:1.23:0,1,119	1/1:10,5:15:40.18:393,40,0	0/0:18,0:18:50.97:0,51,688	0/0:14,0:14:26.70:0,27,396	1/1:27,2:25:55.66:444,56,0	0/1:15,0:15:26.18:26,0,95	1/1:2,24:26:65.31:664,65,0	1/1:3,17:19:38.75:370,39,0	1/1:15,0:15:22.08:232,22,0	1/1:16,0:14:6.28:25,6,0	1/1:13,0:13:12.69:190,13,0	1/1:14,13:27:74.72:814,75,0	0/1:16,1:17:60.02:60,0,97	0/1:27,0:26:51.41:51,0,153	0/1:17,0:16:56.61:74,0,57	0/1:21,0:18:20.90:97,0,21	0/1:16,0:16:47.06:116,0,47	1/1:6,0:6:9.06:52,9,0	1/1:13,0:12:12.15:87,12,0	1/1:11,1:12:9.05:109,9,0	1/1:10,2:11:5.41:125,5,0	1/1:5,16:21:39.12:494,39,0	1/1:2,18:20:56.89:560,57,0	0/1:35,0:34:99:140,0,114	1/1:5,6:11:12.04:158,12,0
chr10	78432125	.	AG	A	6364.58	PASS	AB=0.981;AC=48;AF=0.857;AN=56;BaseQRankSum=5.212;DP=530;FS=4.053;HRun=1;HaplotypeScore=98.2117;InbreedingCoeff=0.7234;MQ=62.77;MQ0=10;MQRankSum=-0.731;QD=13.84;ReadPosRankSum=-1.498;VQSLOD=3.6949;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:40.64:0,41,885	1/1:14,0:14:38.28:285,38,0	0/1:24,1:11:8.93:9,0,124	0/1:27,0:16:7.86:8,0,91	1/1:16,0:16:44.78:353,45,0	0/0:18,0:18:51.67:0,52,545	0/0:15,0:15:27.44:0,27,337	1/1:28,0:24:50.28:358,50,0	1/1:16,0:16:20.66:138,21,0	1/1:25,0:25:64.73:450,65,0	1/1:18,2:19:38.66:288,39,0	1/1:10,4:14:41.18:377,41,0	1/1:3,13:14:11.78:105,12,0	1/1:13,0:13:33.05:265,33,0	1/1:24,3:27:74.52:612,75,0	1/1:16,1:17:12.83:158,13,0	1/1:25,3:27:28.50:207,28,0	1/1:12,3:15:22.48:203,22,0	1/1:19,1:18:40.28:284,40,0	1/1:14,2:16:28.83:282,29,0	1/1:7,1:8:20.97:189,21,0	1/1:1,12:12:15.01:174,15,0	1/1:2,9:11:19.27:219,19,0	1/1:8,4:11:22.77:186,23,0	1/1:16,3:19:38.69:279,39,0	1/1:18,1:19:56.71:449,57,0	1/1:31,3:33:49.78:402,50,0	1/1:6,1:7:11.90:86,12,0
chr10	78432339	.	ACTCTCT	A	1617.10	PASS	AB=0.940;AC=18;AF=0.333;AN=54;BaseQRankSum=2.427;DP=533;FS=13.416;HRun=0;HaplotypeScore=151.7345;InbreedingCoeff=0.2816;MQ=65.60;MQ0=9;MQRankSum=-3.097;QD=7.66;ReadPosRankSum=2.665;VQSLOD=1.6664;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:30:39.02:0,39,890	0/1:5,0:5:3.77:37,0,4	0/0:31,0:25:9.03:0,9,128	0/0:31,0:19:2.94:0,3,18	0/1:21,1:23:49.46:242,0,49	0/1:17,0:18:24.43:24,0,724	0/0:24,0:29:41.40:0,41,928	0/0:34,0:34:22.61:0,23,266	1/1:12,7:18:6.02:100,6,0	0/1:19,0:18:68.06:202,0,68	./.	0/0:17,0:17:10.07:0,10,90	0/1:20,0:20:99:103,0,116	1/1:8,4:12:3.01:62,3,0	1/1:25,0:28:8.98:144,9,0	1/1:8,12:23:26.88:460,27,0	1/1:9,8:19:0.88:2,1,0	0/0:5,0:9:15.05:0,15,190	0/0:18,0:18:15.52:0,16,387	0/0:16,0:17:11.20:0,11,178	0/0:10,0:11:14.17:0,14,298	0/0:16,0:16:7.71:0,8,46	0/0:10,0:10:3.01:0,3,67	0/0:20,0:20:2.99:0,3,46	0/0:12,1:12:3.01:0,3,56	0/1:12,4:16:91.07:287,0,91	0/0:10,0:26:35.84:0,36,876	1/1:4,3:7:6.02:116,6,0
chr10	78432364	.	CTCTCTCTCTCTCGA	C	845.12	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=0.514;DP=822;FS=2.307;HRun=0;HaplotypeScore=212.9758;InbreedingCoeff=0.3700;MQ=42.29;MQ0=89;MQRankSum=-1.916;QD=5.95;ReadPosRankSum=-2.666;VQSLOD=2.3370;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:28.65:0,29,2171	0/0:1,0:8:6.01:0,6,129	0/0:65,0:11:15:0,15,215	0/0:232,0:22:11.75:0,12,142	0/0:20,0:22:6.80:0,7,446	0/0:24,0:24:55.37:0,55,2084	0/0:24,0:24:39.12:0,39,858	0/1:22,0:19:19.78:101,0,20	0/0:21,0:20:24.08:0,24,602	0/0:10,0:27:16.65:0,17,1219	0/0:10,0:10:12.04:0,12,285	1/1:20,1:21:30.10:441,30,0	1/1:7,16:23:2.25:367,2,0	0/0:9,0:9:9.03:0,9,276	0/1:10,0:37:9.54:10,0,106	0/0:26,0:26:20.13:0,20,545	0/0:23,0:23:22.79:0,23,589	0/0:8,0:8:17.88:0,18,684	0/0:12,0:11:16.74:0,17,752	0/0:21,0:20:7.22:0,7,860	0/1:17,0:16:41.58:42,0,1171	1/1:6,16:22:3.91:21,4,0	0/0:3,6:9:3.01:0,3,30	./.	0/0:11,0:12:12.04:0,12,401	0/0:23,0:23:30.61:0,31,1493	0/0:27,0:27:19.56:0,20,1349	0/0:14,0:13:6.47:0,6,609
chr10	78432376	.	CGA	C	1651.27	PASS	AB=0.986;AC=21;AF=0.389;AN=54;BaseQRankSum=5.633;DP=828;FS=27.363;HRun=0;HaplotypeScore=129.2912;InbreedingCoeff=-0.2112;MQ=44.99;MQ0=102;MQRankSum=-2.710;QD=4.47;ReadPosRankSum=-3.940;VQSLOD=0.4463;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:29,1:30:45.80:46,0,560	0/0:7,0:7:4.66:0,5,18	0/0:89,0:9:13.71:0,14,203	0/0:245,2:32:24.83:0,25,485	0/1:14,1:15:99:131,0,224	0/1:22,0:22:61.89:62,0,738	0/0:25,0:25:55.21:0,55,748	1/1:0,14:11:33.02:436,33,0	0/1:20,0:20:69.96:70,0,272	0/1:23,0:22:99:115,0,489	0/0:11,0:10:12.04:0,12,185	1/1:17,4:21:39.13:570,39,0	0/1:18,0:18:35.27:64,0,35	0/0:11,0:11:17.42:0,17,227	0/1:34,0:34:13.36:13,0,240	0/1:29,0:29:53.23:53,0,343	0/0:24,1:25:0.98:0,1,364	0/1:12,1:13:17.16:17,0,25	0/1:13,0:12:11.51:12,0,424	0/1:17,0:16:99:161,0,319	0/1:20,0:19:10.75:11,0,562	1/1:16,1:17:4.81:26,5,0	0/0:7,1:8:3.01:0,3,33	./.	0/0:14,0:13:18.06:0,18,271	0/1:22,0:22:19.39:19,0,613	0/1:25,1:26:6.13:6,0,547	0/1:15,0:15:1.30:1,0,274
chr10	78432421	.	AGTGTGTGTGTGT	A	452.22	PASS	AB=0.875;AC=12;AF=0.250;AN=48;BaseQRankSum=3.083;DP=616;DS;FS=9.491;HRun=0;HaplotypeScore=224.8717;InbreedingCoeff=0.6297;MQ=54.35;MQ0=12;MQRankSum=-3.094;QD=3.30;ReadPosRankSum=-2.529;VQSLOD=1.2440;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:39.61:0,40,1698	./.	./.	./.	./.	0/0:14,0:15:24.04:0,24,986	0/0:28,0:28:44:0,44,1846	0/0:24,0:24:21.04:0,21,354	0/0:24,0:23:39.12:0,39,1681	1/1:20,1:21:9.47:211,9,0	0/0:5,7:12:0.47:0,0,1	0/0:26,0:26:33.06:0,33,595	0/0:26,0:26:30.10:0,30,716	0/0:18,0:18:24.08:0,24,1083	1/1:29,5:35:8.27:64,8,0	0/0:29,0:29:33.44:0,33,1297	0/0:20,0:23:43.70:0,44,1648	0/0:17,0:16:18.06:0,18,618	0/0:13,0:16:21.06:0,21,421	0/0:9,0:11:6.02:0,6,199	0/0:19,0:22:30.10:0,30,901	1/1:19,0:19:2.04:6,2,0	0/1:14,0:13:0:0,0,0	0/0:23,0:23:3.03:0,3,75	1/1:9,12:20:0.94:2,1,0	1/1:17,0:21:7.72:221,8,0	0/0:21,0:24:39.12:0,39,1232	0/1:4,0:6:18.18:78,0,18
chr10	78432428	.	G	GTA	1602.41	PASS	AB=0.932;AC=12;AF=0.222;AN=54;BaseQRankSum=1.387;DP=613;DS;FS=5.742;HRun=0;HaplotypeScore=140.0906;InbreedingCoeff=0.2979;MQ=48.42;MQ0=14;MQRankSum=-0.695;QD=7.89;ReadPosRankSum=0.192;VQSLOD=2.9707;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:53.89:0,54,523	0/0:8,0:8:2.24:0,2,23	0/0:33,0:13:32.93:0,33,285	0/0:30,0:13:16.80:0,17,234	0/0:16,0:16:26.95:0,27,223	0/0:16,0:16:41.96:0,42,385	0/0:28,0:28:71.47:0,71,597	1/1:30,0:29:57.08:568,57,0	0/0:28,0:26:59.84:0,60,520	0/0:17,0:16:44.74:0,45,357	0/0:12,0:12:14.94:0,15,118	0/1:30,0:30:13.72:206,0,14	0/1:28,0:28:19.68:97,0,20	0/0:17,0:17:29.97:0,30,285	0/0:33,0:33:38.65:0,39,308	0/0:28,0:28:50.51:0,51,448	0/0:27,0:26:58.98:0,59,523	0/1:6,11:17:43.83:174,0,44	1/1:15,0:14:4.81:181,5,0	1/1:11,0:11:23.23:166,23,0	0/1:24,0:23:73.65:161,0,74	0/0:20,0:20:3.87:0,4,25	./.	0/1:24,0:23:7.29:18,0,7	0/0:20,0:19:11.98:0,12,99	0/0:20,0:20:55.88:0,56,411	0/1:22,0:22:31.92:192,0,32	0/0:6,0:6:14.91:0,15,111
chr10	78432447	.	TGTG	T	317.67	PASS	AB=0.785;AC=6;AF=0.107;AN=56;BaseQRankSum=8.880;DP=600;FS=10.633;HRun=0;HaplotypeScore=139.3436;InbreedingCoeff=0.1657;MQ=49.34;MQ0=11;MQRankSum=-6.440;QD=2.63;ReadPosRankSum=0.251;VQSLOD=1.9232;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:42:66.11:0,66,1104	0/0:7,0:7:2.88:0,3,38	0/0:16,0:6:18.05:0,18,219	0/0:21,0:9:24.55:0,25,301	0/0:20,0:20:36.11:0,36,455	0/0:19,0:19:44.64:0,45,690	0/0:31,0:31:75.16:0,75,1058	0/0:28,0:27:74.76:0,75,1002	0/0:26,0:24:53.96:0,54,911	0/0:19,0:17:33.64:0,34,550	0/0:13,0:13:15.52:0,16,191	0/1:20,10:31:99:100,0,146	0/1:18,8:26:99:146,0,109	0/0:15,0:15:30.10:0,30,483	0/0:31,0:31:48.15:0,48,641	0/0:25,0:25:52.11:0,52,759	0/0:30,0:29:62.15:0,62,952	0/0:17,0:15:18.06:0,18,367	0/0:12,0:12:35.34:0,35,370	0/0:9,0:9:20.96:0,21,244	0/0:31,0:30:59.71:0,60,690	0/1:18,6:24:47.45:47,0,61	1/1:6,7:13:9.31:110,9,0	0/1:21,5:25:19.39:39,0,19	0/0:20,0:19:11.87:0,12,152	0/0:19,0:19:23.39:0,23,544	0/0:20,0:20:36.69:0,37,461	0/0:6,0:6:1.61:0,2,175
chr10	78433779	.	CA	C	3607.49	PASS	AB=0.918;AC=25;AF=0.446;AN=56;BaseQRankSum=-5.908;DP=529;FS=1.690;HRun=12;HaplotypeScore=81.9497;InbreedingCoeff=0.7902;MQ=65.23;MQ0=2;MQRankSum=1.603;QD=13.07;ReadPosRankSum=3.308;VQSLOD=4.0935;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,3:22:12.94:13,0,398	1/1:0,5:5:14.94:116,15,0	0/0:8,0:8:8.76:0,9,72	0/1:15,1:13:2.08:2,0,117	1/1:5,23:29:64.72:493,65,0	0/0:15,1:17:15.66:0,16,320	0/1:13,1:14:16.37:16,0,201	0/0:17,0:33:68.36:0,68,368	0/0:4,0:17:37.43:0,37,234	1/1:8,23:31:13.79:471,14,0	1/1:5,20:26:28.36:393,28,0	0/0:5,0:13:17.45:0,17,113	0/0:1,0:14:22.73:0,23,115	0/0:4,0:17:32.42:0,32,174	1/1:2,16:24:54.06:360,54,0	0/0:6,0:16:28.69:0,29,163	0/0:6,0:24:36.50:0,37,225	1/1:3,12:17:35.36:264,35,0	1/1:6,7:13:23.90:186,24,0	1/1:6,23:33:22.58:457,23,0	1/1:1,4:5:11.95:93,12,0	0/0:6,0:17:31.50:0,32,168	0/0:5,0:26:35.32:0,35,176	0/0:4,0:21:34.09:0,34,172	1/1:1,15:16:41.84:325,42,0	0/0:15,3:18:15.83:0,16,338	1/1:3,21:25:55.75:417,56,0	0/0:10,0:11:20.87:0,21,191
chr10	78434504	.	CAATAAATA	C	1218.43	PASS	AC=16;AF=0.400;AN=40;BaseQRankSum=3.818;DP=287;FS=7.472;HRun=0;HaplotypeScore=85.2569;InbreedingCoeff=0.6458;MQ=75.66;MQ0=1;MQRankSum=-6.063;QD=14.17;ReadPosRankSum=1.358;VQSLOD=1.1021;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:18:21.05:0,21,689	./.	./.	./.	0/0:10,0:10:9.03:0,9,298	0/0:12,0:12:21.07:0,21,765	./.	./.	0/0:7,0:9:6:0,6,79	0/0:6,0:7:3.01:0,3,105	0/0:7,0:10:9.03:0,9,264	1/1:6,0:12:12.04:223,12,0	1/1:4,0:8:12.04:224,12,0	1/1:5,1:6:3.01:74,3,0	0/0:15,0:15:12.04:0,12,343	0/0:3,0:4:2.99:0,3,24	0/0:15,0:24:26.96:0,27,234	1/1:9,0:9:6.02:141,6,0	1/1:14,2:16:6.02:143,6,0	1/1:8,1:9:3.01:74,3,0	./.	./.	1/1:4,0:5:3.01:56,3,0	./.	0/0:10,0:10:12.04:0,12,490	0/0:6,0:6:3.01:0,3,121	1/1:11,10:21:18.06:431,18,0	0/0:3,0:3:3.01:0,3,121
chr10	78434644	.	AAC	A	1500.33	PASS	AB=0.917;AC=37;AF=0.712;AN=52;BaseQRankSum=8.868;DP=397;FS=0.735;HRun=0;HaplotypeScore=82.2469;InbreedingCoeff=0.1315;MQ=59.95;MQ0=4;MQRankSum=-6.901;QD=4.43;ReadPosRankSum=2.162;VQSLOD=2.4730;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,1:17:54.46:54,0,222	0/1:6,3:9:52.53:53,0,81	./.	./.	0/1:18,1:20:14.84:15,0,335	0/1:14,1:16:18.81:19,0,362	0/1:14,0:14:15.22:15,0,189	0/1:30,0:30:89.64:90,0,95	1/1:4,0:13:21.92:104,22,0	0/1:17,1:19:7.14:7,0,240	0/0:5,0:9:20.98:0,21,179	1/1:7,3:10:9.03:101,9,0	1/1:3,5:8:18.05:202,18,0	1/1:10,0:16:11.36:56,11,0	0/1:13,0:13:7.54:8,0,296	1/1:9,0:23:27.60:132,28,0	1/1:15,0:18:8.52:42,9,0	1/1:17,0:20:8.52:42,9,0	1/1:6,0:8:5.68:28,6,0	1/1:4,0:11:17.04:84,17,0	1/1:10,0:11:2.84:14,3,0	1/1:6,9:15:24.07:270,24,0	1/1:7,5:12:15.04:169,15,0	1/1:4,3:7:6.02:68,6,0	0/1:15,3:17:3.73:4,0,317	0/0:8,0:7:5.81:0,6,58	1/1:2,0:8:18.86:88,19,0	0/0:8,0:8:12:0,12,138
chr10	78435068	.	TA	T	9756.15	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=13.691;DP=703;FS=0.000;HRun=2;HaplotypeScore=68.8703;InbreedingCoeff=0.9749;MQ=88.60;MQ0=0;MQRankSum=-4.226;QD=34.47;ReadPosRankSum=2.053;VQSLOD=5.1064;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.30:0,93,1367	0/0:8,0:8:24.08:0,24,360	0/0:35,0:35:96.01:0,96,1297	0/0:17,0:17:50.49:0,50,688	0/0:27,0:27:81.24:0,81,1172	0/0:22,0:22:63.21:0,63,939	0/0:17,0:17:51.17:0,51,764	1/1:1,30:31:90.22:1096,90,0	0/0:35,0:35:99:0,105,1568	0/0:21,0:21:63.21:0,63,941	0/0:20,0:20:57.15:0,57,795	1/1:0,22:22:54.18:701,54,0	1/1:0,32:32:81.26:1051,81,0	0/0:36,0:36:99:0,108,1616	0/0:36,0:36:99:0,108,1579	0/0:41,0:41:99:0,123,1840	0/0:23,0:23:69.22:0,69,1010	1/1:0,19:19:51.17:661,51,0	1/1:2,17:19:54.14:667,54,0	1/1:0,24:24:66.15:835,66,0	1/1:0,25:25:63.20:818,63,0	1/1:1,27:28:81.26:1047,81,0	1/1:0,15:15:36.07:467,36,0	1/1:1,32:33:87.28:1129,87,0	0/0:16,0:15:48.15:0,48,701	0/0:30,0:29:87.28:0,87,1284	1/1:0,35:35:99:1285,99,0	0/0:3,0:3:3.01:0,3,45
chr10	78435482	.	CAT	C	272.94	PASS	AB=0.701;AC=1;AF=0.018;AN=56;BaseQRankSum=1.874;DP=583;FS=5.628;HRun=0;HaplotypeScore=153.7592;InbreedingCoeff=-0.0244;MQ=60.43;MQ0=5;MQRankSum=-1.456;QD=5.05;ReadPosRankSum=-4.862;VQSLOD=0.9251;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:72.94:0,73,1454	0/0:8,0:8:7.25:0,7,199	0/0:35,0:22:27.31:0,27,969	0/0:34,0:28:77.86:0,78,1116	0/0:14,0:14:25.35:0,25,225	0/0:20,0:20:54.16:0,54,966	0/0:17,0:17:51.16:0,51,901	0/1:31,23:54:99:347,0,1207	0/0:17,0:17:27.05:0,27,524	0/0:17,0:17:51.17:0,51,907	0/0:20,0:20:41.61:0,42,625	0/0:21,0:21:36.38:0,36,815	0/0:16,0:16:42.14:0,42,768	0/0:13,0:13:32.30:0,32,426	0/0:28,0:28:52.88:0,53,744	0/0:19,0:19:43.69:0,44,713	0/0:19,0:19:22.12:0,22,690	0/0:11,0:11:18.03:0,18,338	0/0:20,0:20:28.94:0,29,596	0/0:35,0:35:71.79:0,72,1037	0/0:15,0:15:16.61:0,17,292	0/0:24,0:24:58.35:0,58,941	0/0:17,0:16:41.17:0,41,758	0/0:13,0:13:20.10:0,20,343	0/0:18,0:18:38.57:0,39,528	0/0:18,0:18:54.18:0,54,946	0/0:18,0:18:35.67:0,36,699	0/0:4,0:4:9.03:0,9,152
chr10	78435490	.	G	GACACACAC	13711.21	PASS	AB=0.757;AC=43;AF=0.768;AN=56;BaseQRankSum=-1.673;DP=623;FS=5.067;HRun=0;HaplotypeScore=160.3219;InbreedingCoeff=0.4870;MQ=56.76;MQ0=6;MQRankSum=-6.757;QD=26.27;ReadPosRankSum=1.949;VQSLOD=4.4779;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:17.93:0,18,1123	1/1:4,4:9:12.04:426,12,0	0/1:36,0:21:29.29:29,0,195	0/0:29,0:23:5.89:0,6,181	1/1:4,12:17:6.02:250,6,0	0/0:17,0:19:38.92:0,39,938	0/0:16,0:18:42.13:0,42,955	0/1:50,0:50:99:114,0,122	1/1:9,9:21:24.08:980,24,0	1/1:6,17:24:54.11:1491,54,0	1/1:6,13:21:29.30:1018,29,0	0/1:5,0:22:4.84:225,0,5	1/1:4,0:18:1.79:192,2,0	1/1:3,7:15:15.05:484,15,0	1/1:8,20:30:27.06:1126,27,0	1/1:9,10:22:18.06:678,18,0	1/1:6,11:23:26.09:805,26,0	1/1:14,0:14:15.84:326,16,0	1/1:16,1:17:26.90:333,27,0	1/1:10,1:37:48.16:1697,48,0	0/1:9,0:18:0:0,0,0	1/1:5,0:23:32.98:283,33,0	0/1:4,0:19:29.40:141,0,29	1/1:3,0:13:11.99:99,12,0	1/1:4,14:19:24.08:1002,24,0	1/1:7,10:23:45:1216,45,0	1/1:10,1:23:15.05:479,15,0	1/1:0,6:7:9.03:315,9,0
chr10	78435921	.	A	AAAAC	4499.27	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-2.304;DP=550;FS=16.288;HRun=0;HaplotypeScore=97.4502;InbreedingCoeff=0.9504;MQ=65.96;MQ0=0;MQRankSum=-2.486;QD=38.79;ReadPosRankSum=0.071;VQSLOD=3.9475;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45:0,45,638	0/0:6,0:6:18.05:0,18,271	0/0:18,0:14:12.01:0,12,184	0/0:13,0:9:2.08:0,2,91	0/0:25,0:25:63.22:0,63,1025	0/0:22,0:22:48.12:0,48,731	0/0:14,0:14:19.25:0,19,405	1/1:11,17:29:53.91:991,54,0	0/0:20,0:20:45.15:0,45,711	0/0:32,0:32:69.24:0,69,1122	0/0:22,0:22:60.20:0,60,956	1/1:2,15:17:27.09:653,27,0	1/1:6,11:18:30.10:716,30,0	0/0:12,0:12:30.09:0,30,449	0/0:15,0:15:33.11:0,33,536	0/0:26,0:26:63.20:0,63,1000	0/0:25,0:25:59.90:0,60,896	0/0:24,0:25:57.10:0,57,843	0/0:26,0:26:45.10:0,45,679	0/0:31,0:31:90.31:0,90,1460	0/0:12,0:12:36.12:0,36,581	1/1:1,13:14:33.11:762,33,0	1/1:7,12:19:27.09:653,27,0	1/1:3,14:18:30.10:725,30,0	0/0:15,0:15:36.12:0,36,585	0/0:27,0:27:69.22:0,69,1098	0/0:24,0:24:69.22:0,69,1098	0/0:8,0:8:24.06:0,24,340
chr10	78436505	.	G	GGGGTGTGTGTGTGT	16352.79	PASS	AB=0.790;AC=38;AF=0.679;AN=56;BaseQRankSum=3.544;DP=444;FS=22.503;HRun=0;HaplotypeScore=197.7784;InbreedingCoeff=0.2888;MQ=50.96;MQ0=3;MQRankSum=-9.904;QD=52.58;ReadPosRankSum=0.906;VQSLOD=3.1518;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:68.40:0,68,1962	0/1:3,0:5:38.88:156,0,39	0/0:40,0:20:44.94:0,45,1040	0/0:35,0:19:34.91:0,35,790	0/1:10,0:12:40.86:156,0,41	0/0:11,0:14:30.09:0,30,1126	0/0:16,0:16:48.15:0,48,1841	1/1:25,0:24:60:1568,60,0	1/1:8,0:12:2.27:389,2,0	0/1:18,0:23:88.43:1473,0,88	0/1:12,0:16:50.75:600,0,51	1/1:6,5:12:21.54:1334,22,0	1/1:7,4:12:24.08:1471,24,0	1/1:4,0:13:22.22:194,22,0	1/1:16,0:23:12.12:1760,12,0	1/1:7,0:14:34.32:422,34,0	0/1:10,0:16:37.96:53,0,38	1/1:6,1:15:19.32:1146,19,0	1/1:10,4:17:43.50:1267,44,0	1/1:7,4:13:15.05:838,15,0	1/1:15,0:15:20.97:469,21,0	1/1:4,0:5:6.02:275,6,0	1/1:1,3:6:3.01:138,3,0	1/1:11,1:12:15.02:602,15,0	0/1:12,0:12:9.88:464,0,10	0/1:8,0:18:10.68:760,0,11	1/1:7,0:7:18.05:778,18,0	0/1:3,0:4:39.33:39,0,56
chr10	78436529	.	TTATAA	T	633.64	PASS	AB=0.949;AC=14;AF=0.250;AN=56;BaseQRankSum=4.606;DP=461;FS=17.393;HRun=0;HaplotypeScore=130.6015;InbreedingCoeff=-0.1973;MQ=49.82;MQ0=2;MQRankSum=-4.516;QD=3.68;ReadPosRankSum=-0.979;VQSLOD=1.5137;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.32:0,93,2924	0/0:6,0:6:15.05:0,15,440	0/0:39,0:27:75.72:0,76,2197	0/0:30,0:22:63.22:0,63,1804	0/0:10,1:11:18.02:0,18,345	0/0:13,0:13:39.13:0,39,1246	0/0:22,0:22:66.23:0,66,2130	0/1:21,4:24:99:201,0,1475	0/0:16,0:16:45.12:0,45,949	0/1:12,0:14:87.24:87,0,849	0/1:12,0:15:99:115,0,604	0/0:13,0:13:11.90:0,12,245	0/0:17,0:17:43.61:0,44,961	0/0:17,0:17:45.15:0,45,1141	0/0:24,0:23:57.19:0,57,1361	0/0:16,0:16:48.16:0,48,1192	0/1:13,0:14:37.44:37,0,749	0/1:17,0:17:27.45:27,0,1092	0/1:11,1:12:27.53:28,0,786	0/1:17,0:17:27.21:27,0,929	0/1:15,1:16:63.35:63,0,597	0/1:5,1:5:54.47:54,0,180	0/1:8,0:7:54.25:54,0,293	0/0:12,2:14:33.11:0,33,851	0/1:12,2:14:30.44:30,0,835	0/0:19,0:19:57.20:0,57,1612	0/1:12,1:13:20.65:21,0,911	1/1:1,0:1:3.01:44,3,0
chr10	78436530	.	TATAA	T	109.39	PASS	AB=0.951;AC=8;AF=0.143;AN=56;BaseQRankSum=6.086;DP=463;FS=26.792;HRun=0;HaplotypeScore=127.3978;InbreedingCoeff=0.0044;MQ=50.12;MQ0=1;MQRankSum=-5.106;QD=1.24;ReadPosRankSum=-0.500;VQSLOD=0.9311;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.33:0,96,2696	0/0:6,0:6:15.05:0,15,424	0/0:37,0:26:72.67:0,73,1870	0/0:28,0:22:63.21:0,63,1557	0/0:11,0:11:18.02:0,18,421	0/0:13,0:13:39.13:0,39,1095	0/0:22,0:22:66.23:0,66,1892	0/1:27,0:26:65.40:65,0,1463	0/0:16,0:16:43.03:0,43,1026	0/1:12,2:14:43.56:44,0,749	0/1:12,3:15:61.78:62,0,612	0/0:13,0:13:12.04:0,12,263	0/0:17,0:17:45.12:0,45,1033	0/0:17,0:17:45.15:0,45,1213	0/0:25,0:24:60.21:0,60,1604	0/0:17,0:17:51.18:0,51,1391	0/0:14,0:14:0.14:0,0,735	0/0:17,0:17:10.39:0,10,1030	0/0:12,0:12:3.88:0,4,803	0/0:17,0:17:11.33:0,11,1043	0/1:16,0:16:4.36:4,0,554	0/1:6,0:5:15.76:16,0,268	0/1:9,0:8:13.58:14,0,333	0/0:14,0:14:33.11:0,33,865	0/0:14,0:14:7.63:0,8,916	0/0:19,0:19:57.20:0,57,1523	0/0:13,0:13:17.44:0,17,895	1/1:1,0:1:3.01:31,3,0
chr10	78436822	.	CGAAA	C	1328.84	PASS	AB=0.931;AC=19;AF=0.365;AN=52;BaseQRankSum=2.178;DP=494;FS=10.422;HRun=0;HaplotypeScore=108.5901;InbreedingCoeff=0.5949;MQ=61.46;MQ0=4;MQRankSum=-1.486;QD=6.89;ReadPosRankSum=3.106;VQSLOD=1.8215;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,6:17:3.01:46,3,0	1/1:5,0:6:3:28,3,0	./.	./.	1/1:15,0:20:21.18:175,21,0	0/1:11,1:12:21.54:22,0,464	0/0:18,0:18:21.07:0,21,487	0/0:25,0:22:0:0,0,0	0/0:21,0:22:21.04:0,21,290	1/1:16,0:20:25.75:230,26,0	1/1:9,0:10:3:28,3,0	0/0:21,0:21:19.43:0,19,222	0/0:14,0:14:18.06:0,18,302	0/0:16,0:15:12.04:0,12,279	1/1:14,1:18:18.03:216,18,0	0/0:25,0:28:42.14:0,42,693	0/0:20,0:23:36.08:0,36,554	0/1:18,0:20:6.99:85,0,7	0/0:20,0:19:12.04:0,12,278	0/0:23,0:23:19.23:0,19,936	1/1:7,2:9:9:113,9,0	0/0:9,0:8:17.39:0,17,185	0/0:16,0:14:6.02:0,6,76	0/0:11,0:14:17.70:0,18,218	1/1:27,8:35:38.62:555,39,0	0/1:23,1:24:10.13:10,0,651	0/0:22,0:22:36.12:0,36,799	0/0:2,0:2:3.01:0,3,45
chr10	78436888	.	GAAGA	G	5436.12	PASS	AB=0.767;AC=19;AF=0.339;AN=56;BaseQRankSum=3.740;DP=615;FS=9.178;HRun=0;HaplotypeScore=240.0221;InbreedingCoeff=-0.5525;MQ=40.93;MQ0=11;MQRankSum=-6.049;QD=12.11;ReadPosRankSum=1.085;VQSLOD=3.1733;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:38.99:0,39,1011	0/0:8,0:8:8.58:0,9,76	0/0:17,0:4:11.99:0,12,249	0/1:25,0:3:0.03:0,0,73	0/0:25,0:25:1.93:0,2,917	0/0:14,0:13:21.05:0,21,472	0/0:22,0:22:50.82:0,51,1213	0/1:22,11:29:99:305,0,997	0/1:14,16:28:99:473,0,525	0/0:21,0:21:33.77:0,34,997	0/0:12,0:12:2.15:0,2,214	0/1:13,6:18:99:344,0,380	0/1:15,8:22:99:367,0,759	0/1:13,7:20:99:264,0,727	0/0:24,0:25:0.48:0,0,1103	0/1:18,8:25:99:370,0,695	0/1:22,18:38:99:142,0,827	0/1:15,5:21:99:248,0,486	0/1:16,2:19:99:122,0,630	0/1:18,13:31:99:400,0,989	0/1:4,0:4:22.80:23,0,121	0/1:16,11:24:99:502,0,628	0/1:10,6:13:99:232,0,380	0/1:7,4:11:83.91:84,0,231	0/1:29,1:30:44.16:44,0,875	0/1:17,19:36:99:760,0,1067	0/1:13,16:29:99:661,0,735	0/1:2,3:5:63.34:96,0,63
chr10	78436893	.	A	AAGAAAGGG	12708.04	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=4.094;DP=611;FS=3.155;HRun=0;HaplotypeScore=256.8383;InbreedingCoeff=0.5290;MQ=41.88;MQ0=12;MQRankSum=-7.009;QD=24.92;ReadPosRankSum=3.439;VQSLOD=4.4378;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:47.83:0,48,1078	1/1:4,4:8:18.06:574,18,0	0/0:19,0:4:6.02:0,6,152	0/0:28,0:5:5.65:0,6,90	1/1:20,5:27:51.03:1180,51,0	0/0:9,0:8:15.05:0,15,364	0/0:22,0:22:60.15:0,60,1290	1/1:31,0:27:22.78:655,23,0	1/1:30,0:28:30.21:446,30,0	1/1:16,4:19:45.10:1179,45,0	1/1:7,3:13:24.94:671,25,0	0/1:21,0:19:8.53:218,0,9	1/1:23,0:22:41.13:516,41,0	1/1:22,0:21:1.39:480,1,0	1/1:19,6:25:57.15:1539,57,0	1/1:26,0:25:1.37:387,1,0	0/1:37,0:35:47.32:248,0,47	0/1:20,0:20:52.28:425,0,52	1/1:19,0:17:27.75:478,28,0	1/1:29,0:29:35.58:419,36,0	1/1:4,0:4:3.01:37,3,0	1/1:27,0:24:24.40:457,24,0	1/1:16,0:13:13.01:210,13,0	1/1:10,0:10:5.76:32,6,0	1/1:21,7:29:54.17:1505,54,0	1/1:37,0:37:12.81:563,13,0	1/1:30,0:30:31.86:402,32,0	1/1:5,0:5:8.35:86,8,0
chr10	78436913	.	A	AAGGG	8190.67	PASS	AB=0.998;AC=27;AF=0.482;AN=56;BaseQRankSum=1.797;DP=624;FS=17.831;HRun=0;HaplotypeScore=219.1962;InbreedingCoeff=-0.0968;MQ=43.49;MQ0=12;MQRankSum=-9.229;QD=17.03;ReadPosRankSum=1.260;VQSLOD=3.1761;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:63.14:0,63,1114	1/1:0,6:8:18.06:470,18,0	0/0:30,0:8:24.08:0,24,440	0/0:47,0:11:18.04:0,18,251	1/1:13,12:28:52.46:1153,52,0	0/0:8,0:7:21.07:0,21,389	0/0:21,0:21:59.39:0,59,1113	0/1:30,0:29:99:172,0,391	0/1:30,0:28:99:214,0,649	1/1:7,7:19:47.83:941,48,0	1/1:2,11:18:33.58:802,34,0	0/1:17,0:15:58:58,0,483	0/1:25,0:24:99:255,0,540	0/1:22,0:21:99:292,0,567	1/1:12,12:27:62.94:1248,63,0	0/1:18,0:17:99:159,0,381	0/1:32,0:30:61.86:62,0,573	0/1:26,0:26:85.57:86,0,742	0/1:19,0:17:99:112,0,546	0/1:21,0:21:99:125,0,471	0/0:3,0:3:6.02:0,6,80	0/1:25,0:22:99:215,0,555	0/1:19,0:16:99:148,0,468	0/0:7,0:7:8.61:0,9,173	1/1:7,13:25:50.06:1208,50,0	0/1:34,0:35:99:266,0,1093	0/1:30,0:30:99:187,0,951	0/1:5,0:5:17.29:17,0,73
chr10	78437063	.	GA	G	4899.64	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=10.042;DP=580;FS=11.774;HRun=8;HaplotypeScore=63.3464;InbreedingCoeff=0.9336;MQ=64.91;MQ0=8;MQRankSum=-0.298;QD=20.50;ReadPosRankSum=-1.142;VQSLOD=3.7679;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:37.56:0,38,597	0/0:11,0:11:24.06:0,24,278	0/0:38,0:21:41.12:0,41,460	0/1:38,0:18:8.92:9,0,68	0/0:24,0:24:66.19:0,66,784	0/0:13,0:13:39.12:0,39,471	0/0:18,0:18:48.10:0,48,558	1/1:6,32:38:99:922,102,0	0/0:22,0:22:60.14:0,60,708	0/0:31,0:31:87.27:0,87,1051	0/0:21,0:21:63.16:0,63,745	1/1:0,13:13:39.06:377,39,0	1/1:1,13:14:39.06:375,39,0	0/0:13,0:13:33.10:0,33,395	0/0:17,0:17:39.12:0,39,468	0/0:15,0:15:45.14:0,45,543	0/0:24,0:24:57.17:0,57,688	1/1:3,11:14:27.04:261,27,0	1/1:2,21:23:60.09:579,60,0	1/1:2,17:19:45.06:435,45,0	1/1:0,15:15:45.07:435,45,0	1/1:0,14:14:33.05:319,33,0	1/1:2,13:14:33.05:319,33,0	1/1:1,18:19:45.54:435,46,0	0/0:32,0:32:84.26:0,84,1014	0/0:29,0:29:75.23:0,75,905	1/1:2,15:17:45.07:435,45,0	0/0:10,0:10:24.07:0,24,290
chr10	78438382	.	CAGACAA	C	5149.06	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.819;DP=640;FS=14.319;HRun=0;HaplotypeScore=159.6260;InbreedingCoeff=0.9870;MQ=70.72;MQ0=0;MQRankSum=-13.076;QD=45.97;ReadPosRankSum=-1.023;VQSLOD=4.0453;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,3362	0/0:15,0:15:36.12:0,36,1226	0/0:19,0:19:21.55:0,22,1011	0/0:8,0:8:12.04:0,12,397	0/0:28,0:28:75.26:0,75,2530	0/0:19,0:19:51.17:0,51,1729	0/0:24,0:24:60.21:0,60,2003	0/0:26,0:26:63.22:0,63,2102	0/0:12,0:12:36.12:0,36,1235	0/0:38,0:38:93.32:0,93,3070	0/0:21,0:21:51.17:0,51,1751	0/0:25,0:25:66.21:0,66,2178	0/0:24,0:24:63.22:0,63,2085	0/0:26,0:26:69.24:0,69,2316	0/0:24,0:24:66.23:0,66,2249	0/0:28,0:28:78.25:0,78,2501	0/0:29,0:29:75.26:0,75,2575	1/1:0,8:8:21.07:469,21,0	1/1:8,9:17:27.08:560,27,0	1/1:4,41:45:99:2514,114,0	1/1:7,8:15:15.05:335,15,0	0/0:25,0:25:69.24:0,69,2270	0/0:30,0:30:84.27:0,84,2757	0/0:18,0:18:54.16:0,54,1683	0/0:17,0:17:39.13:0,39,1339	0/0:28,0:28:75.26:0,75,2512	1/1:5,22:26:57.20:1272,57,0	0/0:10,0:10:30.10:0,30,1009
chr10	78440023	.	G	GTCTC	996.89	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.984;DP=754;FS=0.915;HRun=0;HaplotypeScore=144.0011;InbreedingCoeff=0.9049;MQ=85.79;MQ0=0;MQRankSum=-5.547;QD=52.47;ReadPosRankSum=-2.948;VQSLOD=3.6781;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,2965	0/0:10,0:10:30.10:0,30,629	0/0:26,0:26:74.03:0,74,1416	0/0:32,0:32:87.76:0,88,1766	0/0:30,0:30:90.31:0,90,1869	0/0:26,0:26:75.26:0,75,1556	0/0:34,0:34:99:0,102,2095	1/1:6,13:19:51.15:1092,51,0	0/0:21,0:21:63.22:0,63,1322	0/0:35,0:35:99:0,102,2097	0/0:16,0:16:45.15:0,45,937	0/0:26,0:26:78.27:0,78,1636	0/0:32,0:32:96.33:0,96,2002	0/0:21,0:21:57.20:0,57,1196	0/0:33,0:33:99:0,99,1954	0/0:36,0:36:99:0,102,2067	0/0:32,0:32:96.29:0,96,1885	0/0:27,0:27:75.21:0,75,1530	0/0:27,0:27:78.25:0,78,1560	0/0:14,0:14:42.13:0,42,844	0/0:30,0:30:87.30:0,87,1824	0/0:34,0:34:99:0,99,2005	0/0:22,0:22:63.19:0,63,1247	0/0:21,0:21:57.20:0,57,1169	0/0:30,0:30:87.30:0,87,1823	0/0:34,0:34:99:0,102,2095	0/0:33,0:32:99:0,99,2075	0/0:3,0:3:6.02:0,6,126
chr10	78440024	.	G	GA	364.41	PASS	AB=0.649;AC=1;AF=0.018;AN=56;BaseQRankSum=7.277;DP=759;FS=0.000;HRun=1;HaplotypeScore=99.2388;InbreedingCoeff=0.1381;MQ=85.58;MQ0=0;MQRankSum=-5.927;QD=15.18;ReadPosRankSum=-3.137;VQSLOD=2.3486;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,150,1879	0/0:10,0:10:30.10:0,30,389	0/0:25,0:25:75.16:0,75,879	0/0:33,0:33:86.93:0,87,1069	0/0:30,0:30:90.28:0,90,1152	0/0:26,0:26:75.23:0,75,958	0/0:35,0:35:96.29:0,96,1229	0/1:11,13:24:9.39:439,0,9	0/0:21,0:21:63.20:0,63,817	0/0:35,0:35:99:0,99,1274	0/0:15,0:15:45.15:0,45,583	0/0:27,0:27:78.25:0,78,1011	0/0:33,0:33:96.27:0,96,1214	0/0:21,0:21:63.18:0,63,788	0/0:32,0:32:93.26:0,93,1165	0/0:35,0:35:99:0,105,1319	0/0:31,0:31:87.24:0,87,1097	0/0:26,0:26:72.22:0,72,921	0/0:27,0:27:78.23:0,78,976	0/0:15,0:15:39.13:0,39,506	0/0:31,0:31:90.27:0,90,1140	0/0:34,0:34:99:0,99,1238	0/0:20,0:20:60.17:0,60,751	0/0:22,0:22:63.12:0,63,756	0/0:30,0:30:90.26:0,90,1137	0/0:35,0:35:99:0,102,1280	0/0:33,0:32:99:0,99,1280	0/0:3,0:3:6.02:0,6,78
chr10	78440589	.	C	CACAG	12362.72	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=-3.701;DP=883;FS=2.303;HRun=0;HaplotypeScore=196.7574;InbreedingCoeff=0.2397;MQ=55.47;MQ0=32;MQRankSum=-1.014;QD=27.97;ReadPosRankSum=9.628;VQSLOD=4.2041;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1685	0/1:15,0:13:25.89:245,0,26	0/0:88,0:23:49.39:0,49,478	0/0:74,0:29:44.78:0,45,659	1/1:10,0:10:9.03:157,9,0	0/0:16,0:16:45.10:0,45,739	0/0:34,0:33:84.59:0,85,1310	0/0:34,0:33:64.10:0,64,414	0/1:27,0:27:27.38:314,0,27	0/1:23,0:22:99:332,0,144	0/1:21,0:21:11.12:370,0,11	1/1:4,39:47:87.24:2230,87,0	1/1:2,30:37:66.10:1705,66,0	0/1:24,0:24:99:335,0,111	0/1:36,0:36:99:677,0,107	0/1:40,0:40:57.30:443,0,57	0/1:26,0:26:27.79:286,0,28	0/0:24,0:23:50.40:0,50,305	0/0:17,0:16:30.72:0,31,196	0/0:17,0:16:16.07:0,16,126	0/0:58,0:56:77.71:0,78,514	1/1:1,19:19:51.18:1363,51,0	1/1:9,6:15:41.21:730,41,0	1/1:19,29:48:99:2679,115,0	0/1:25,0:25:99:381,0,127	0/1:27,0:27:99:116,0,243	0/0:37,0:36:69.36:0,69,347	0/0:3,0:3:8.91:0,9,62
chr10	78440597	.	C	CAG	5758.04	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=9.011;DP=899;FS=12.887;HRun=0;HaplotypeScore=204.4568;InbreedingCoeff=0.1875;MQ=54.46;MQ0=32;MQRankSum=-6.132;QD=11.18;ReadPosRankSum=8.055;VQSLOD=3.1034;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,108,1407	0/1:15,0:13:6.76:7,0,45	0/0:92,0:19:45.90:0,46,472	0/0:75,0:30:42.46:0,42,559	0/1:9,0:9:13.50:17,0,13	0/0:17,0:17:51.07:0,51,663	0/0:36,0:35:90.10:0,90,1145	1/1:26,10:35:39.30:830,39,0	0/1:26,0:26:22.48:31,0,22	0/1:24,0:23:8.41:8,0,223	0/1:19,0:19:29.74:30,0,58	0/1:43,0:43:9.96:10,0,34	0/1:35,0:35:8.48:33,0,8	0/1:24,0:24:26.98:27,0,101	0/1:39,0:39:23.87:24,0,216	0/1:41,0:41:61.78:62,0,71	0/1:27,0:27:3.81:4,0,121	1/1:13,11:23:41.35:728,41,0	1/1:2,11:13:27.01:441,27,0	1/1:3,17:19:8.61:411,9,0	1/1:31,28:57:94.77:1631,95,0	0/1:25,0:24:2.53:3,0,56	0/0:16,0:15:24.17:0,24,156	0/0:48,0:48:23.67:0,24,236	0/0:26,0:26:16.01:0,16,190	0/0:25,0:25:24.21:0,24,346	1/1:10,25:34:74.44:1463,74,0	0/0:3,0:3:8.90:0,9,61
chr10	78440685	.	GAC	G	4122	PASS	AB=0.919;AC=16;AF=0.308;AN=52;BaseQRankSum=6.390;DP=813;FS=4.527;HRun=0;HaplotypeScore=132.9292;InbreedingCoeff=0.5551;MQ=50.06;MQ0=49;MQRankSum=2.659;QD=15.21;ReadPosRankSum=3.315;VQSLOD=3.5182;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:53:99:0,132,2143	0/1:5,1:6:22.46:22,0,180	0/0:41,0:6:5.80:0,6,66	./.	0/0:26,0:25:61.43:0,61,944	0/0:22,0:18:44.74:0,45,687	0/0:47,0:43:97.20:0,97,1557	0/0:14,0:7:2.97:0,3,20	0/0:29,1:27:30.48:0,30,1010	0/0:39,0:37:76.33:0,76,1478	0/0:25,0:25:60.17:0,60,905	1/1:7,16:22:32.25:650,32,0	1/1:9,19:29:69.05:838,69,0	0/1:33,3:36:22.05:22,0,1166	0/0:35,0:35:78.23:0,78,1195	0/0:36,1:37:41.71:0,42,1323	0/0:47,3:50:50.40:0,50,1406	0/0:7,0:7:10.17:0,10,70	./.	0/0:9,0:8:1.36:0,1,2	0/1:37,0:35:10.62:11,0,24	1/1:9,23:32:54.17:666,54,0	1/1:4,13:15:21.03:246,21,0	1/1:19,39:54:99:1567,126,0	0/1:23,3:25:52.36:52,0,746	0/0:40,1:36:89.92:0,90,1383	1/1:6,1:7:5.87:48,6,0	0/0:5,0:5:12.04:0,12,198
chr10	78440699	.	CAA	C	936.69	PASS	AB=0.985;AC=9;AF=0.173;AN=52;BaseQRankSum=12.038;DP=801;FS=8.497;HRun=3;HaplotypeScore=148.9594;InbreedingCoeff=-0.0597;MQ=49.93;MQ0=57;MQRankSum=3.012;QD=4.32;ReadPosRankSum=5.233;VQSLOD=-0.4192;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:55:99:0,156,2713	0/0:7,0:7:10.20:0,10,274	0/0:25,0:1:2.97:0,3,20	0/0:38,0:1:2.90:0,3,16	0/0:30,0:28:62.60:0,63,1073	0/0:21,0:17:50.67:0,51,827	0/0:43,0:39:74.64:0,75,1701	./.	0/0:36,0:31:58.09:0,58,1218	0/0:44,1:41:55.24:0,55,1680	0/0:26,0:24:66.15:0,66,1088	0/1:31,0:30:99:121,0,117	0/1:30,0:30:99:217,0,101	0/0:32,1:33:57.81:0,58,1288	0/0:34,0:34:87.09:0,87,1368	0/0:39,0:39:98.03:0,98,1632	0/0:48,2:50:39.20:0,39,1576	0/0:10,0:9:8.38:0,8,52	./.	0/1:7,0:6:16.58:17,0,18	0/1:24,0:21:13.34:56,0,13	0/1:29,3:32:49.79:255,0,50	0/1:19,0:16:30.98:43,0,31	0/1:68,0:64:99:335,0,198	0/0:26,0:22:26.79:0,27,844	0/0:44,0:38:88.31:0,88,1712	1/1:5,0:4:1.20:24,1,0	0/0:4,0:4:12.04:0,12,231
chr10	78440711	.	GAC	G	359.68	PASS	AB=0.625;AC=7;AF=0.146;AN=48;BaseQRankSum=6.832;DP=829;FS=18.251;HRun=0;HaplotypeScore=165.6787;InbreedingCoeff=0.7215;MQ=49.23;MQ0=69;MQRankSum=-5.271;QD=9.72;ReadPosRankSum=-0.791;VQSLOD=2.2719;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:55:99:0,142,2299	0/0:9,0:9:24.08:0,24,405	./.	./.	0/0:29,0:27:63.16:0,63,989	0/0:22,0:18:39.13:0,39,663	0/0:47,0:43:70.34:0,70,1153	./.	0/0:40,0:35:72.22:0,72,1157	0/0:49,0:42:99:0,109,1728	0/0:30,0:28:75.26:0,75,1270	0/0:36,0:35:87.30:0,87,1468	0/0:38,0:38:99:0,105,1663	0/0:29,0:29:60.12:0,60,943	0/0:40,0:37:87.24:0,87,1374	0/0:47,0:46:99:0,108,1798	0/0:45,0:45:78.31:0,78,1352	0/1:4,6:9:42.36:181,0,42	./.	1/1:1,2:3:6:63,6,0	1/1:9,11:17:17.49:166,17,0	0/0:31,0:29:72.16:0,72,1175	0/0:23,0:20:30.10:0,30,510	0/0:74,1:71:99:0,174,2796	0/0:27,0:22:54.15:0,54,859	0/0:47,0:41:99:0,106,1653	1/1:1,3:3:6.02:78,6,0	0/0:3,0:3:6.02:0,6,102
chr10	78440814	.	G	GACAC	3706.57	PASS	AB=0.818;AC=10;AF=0.179;AN=56;BaseQRankSum=7.608;DP=849;FS=11.655;HRun=0;HaplotypeScore=189.1337;InbreedingCoeff=0.7447;MQ=55.56;MQ0=19;MQRankSum=-9.138;QD=34.97;ReadPosRankSum=-0.507;VQSLOD=2.6246;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1916	0/0:9,0:9:24.08:0,24,447	0/0:34,0:10:26.13:0,26,300	0/0:36,0:14:23.53:0,24,389	0/0:34,0:34:90.06:0,90,1627	0/0:23,0:23:66.15:0,66,1148	0/0:45,0:45:99:0,109,1932	0/1:15,0:11:24.11:258,0,24	0/0:37,0:36:72.06:0,72,1368	0/0:36,0:36:99:0,108,1960	0/0:25,0:25:73.65:0,74,1211	0/0:36,0:36:96.26:0,96,1713	0/0:40,0:40:99:0,102,1646	0/0:40,0:40:84.05:0,84,1366	0/0:51,0:51:99:0,141,2412	0/0:31,0:31:72.16:0,72,1219	0/0:31,0:31:70.90:0,71,1196	0/1:3,4:7:28.96:288,0,29	1/1:4,7:6:12.04:214,12,0	1/1:6,16:20:54.15:1026,54,0	1/1:14,13:25:42.08:993,42,0	0/0:39,0:39:99:0,105,1920	0/0:18,0:18:54.18:0,54,965	0/0:72,0:71:99:0,195,3204	0/0:30,0:30:71.81:0,72,1210	0/0:31,0:30:81.26:0,81,1429	1/1:9,12:21:52.31:928,52,0	0/0:5,0:5:15.05:0,15,285
chr10	78440830	.	GAC	G	4283.81	PASS	AB=0.713;AC=17;AF=0.304;AN=56;BaseQRankSum=14.342;DP=865;FS=2.032;HRun=0;HaplotypeScore=156.1698;InbreedingCoeff=0.6733;MQ=49.41;MQ0=47;MQRankSum=-7.480;QD=18.23;ReadPosRankSum=-2.180;VQSLOD=4.5241;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:46:99:0,108,1705	0/0:10,0:10:14.13:0,14,354	0/0:28,0:4:6.02:0,6,99	0/0:32,0:6:8.34:0,8,48	0/0:36,0:35:78.27:0,78,1278	0/0:24,0:21:39.12:0,39,611	0/0:44,1:42:58.76:0,59,1378	0/1:10,2:3:2.59:3,0,60	1/1:14,22:36:78.59:886,79,0	0/0:44,0:38:98.21:0,98,1530	0/0:31,0:27:17.01:0,17,801	0/0:31,2:33:15.26:0,15,1272	0/0:32,3:35:8.03:0,8,1028	1/1:12,31:41:64.09:830,64,0	0/0:52,0:51:99:0,122,1909	1/1:2,29:30:75.12:878,75,0	1/1:12,15:27:51.94:609,52,0	0/1:3,5:7:9.64:115,0,10	1/1:5,1:1:3.01:38,3,0	1/1:6,15:19:35.86:347,36,0	1/1:12,12:21:30.49:224,30,0	0/0:44,0:43:89.51:0,90,1760	0/0:22,0:20:7.95:0,8,582	0/0:75,1:74:99:0,178,2797	0/0:29,2:29:3.17:0,3,1066	0/0:32,0:29:74.89:0,75,1156	0/1:13,13:25:40.77:355,0,41	0/0:5,0:5:15.05:0,15,244
chr10	78440853	.	CCAGACACACACA	C	4669.34	PASS	AB=1.000;AC=9;AF=0.173;AN=52;BaseQRankSum=10.789;DP=889;FS=12.337;HRun=0;HaplotypeScore=328.3537;InbreedingCoeff=0.7888;MQ=48.05;MQ0=67;MQRankSum=-8.580;QD=30.92;ReadPosRankSum=-2.056;VQSLOD=2.6406;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:50:99:0,108,4182	0/0:13,0:13:27.02:0,27,958	./.	./.	0/0:36,0:35:60.16:0,60,2157	0/0:19,0:16:36.11:0,36,1345	0/0:37,0:32:42.10:0,42,1245	0/0:15,0:7:18:0,18,243	1/1:19,14:31:66.14:1284,66,0	0/0:49,0:42:93.76:0,94,3438	0/0:30,0:26:51.10:0,51,2006	0/0:40,0:40:99:0,102,3645	0/0:45,0:45:99:0,108,3723	1/1:25,10:33:75.05:1433,75,0	0/0:45,0:44:99:0,108,3948	1/1:21,11:31:57.02:1093,57,0	1/1:20,3:23:38.94:840,39,0	0/0:8,0:6:3:0,3,28	0/0:7,0:2:4.15:0,4,14	0/0:27,0:25:40.82:0,41,562	0/1:28,0:21:20.20:20,0,58	0/0:51,0:50:99:0,123,4422	0/0:26,0:24:54.17:0,54,1954	0/0:80,0:78:99:0,150,7298	0/0:40,0:38:99:0,102,4103	0/0:34,0:28:70.06:0,70,1608	0/0:23,0:23:43.33:0,43,812	0/0:4,0:4:12.02:0,12,368
chr10	78440856	.	GAC	G	1681.30	PASS	AB=1.000;AC=15;AF=0.288;AN=52;BaseQRankSum=11.099;DP=885;FS=6.800;HRun=0;HaplotypeScore=209.9981;InbreedingCoeff=0.4829;MQ=47.81;MQ0=71;MQRankSum=-12.439;QD=7.37;ReadPosRankSum=-0.702;VQSLOD=2.6463;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:54:99:0,126,2024	0/0:13,0:13:27.09:0,27,440	./.	./.	0/0:33,0:32:67.44:0,67,1063	0/0:19,0:16:38.69:0,39,630	0/0:38,0:33:63.17:0,63,969	1/1:9,8:9:21.07:268,21,0	0/1:32,0:31:46.39:46,0,224	0/0:47,0:40:99:0,108,1712	0/0:29,0:25:54.16:0,54,844	0/0:39,0:39:99:0,105,1741	0/0:46,0:46:99:0,110,1770	0/1:33,0:30:16.58:17,0,315	0/0:46,0:45:99:0,114,1867	0/1:30,0:29:31.55:32,0,291	0/1:23,0:23:82.72:83,0,147	1/1:8,1:6:3.01:34,3,0	0/1:8,0:3:28.09:30,0,28	1/1:6,20:24:42.61:544,43,0	1/1:22,6:21:11.89:106,12,0	0/0:51,0:51:99:0,135,2122	0/0:25,0:23:57.18:0,57,938	0/0:80,0:78:99:0,159,3102	0/0:40,0:38:99:0,103,1723	0/0:35,0:29:77.07:0,77,1238	1/1:2,20:22:54.17:698,54,0	0/0:4,0:4:12.04:0,12,198
chr10	78440882	.	GACACACAA	G	1673.87	PASS	AB=0.791;AC=6;AF=0.115;AN=52;BaseQRankSum=4.623;DP=925;FS=14.076;HRun=0;HaplotypeScore=314.1397;InbreedingCoeff=0.5025;MQ=46.63;MQ0=74;MQRankSum=-4.887;QD=23.25;ReadPosRankSum=-0.319;VQSLOD=1.8163;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:55:99:0,130,3508	0/0:14,0:12:28.78:0,29,566	0/0:41,0:2:6.02:0,6,138	./.	0/0:29,0:28:54.02:0,54,1350	0/0:24,0:21:44.22:0,44,1139	0/0:34,0:29:44.98:0,45,1153	0/0:47,0:37:62.81:0,63,1434	0/0:33,0:32:48.10:0,48,726	0/0:48,0:41:99:0,108,3018	0/0:27,0:23:49.24:0,49,1033	0/0:44,0:44:98.93:0,99,2496	0/0:45,0:45:99:0,111,3169	0/0:41,0:38:82.74:0,83,1584	0/0:41,0:39:65.20:0,65,1927	0/0:31,0:30:63.99:0,64,1324	0/0:28,0:28:45.85:0,46,1334	0/1:7,0:4:13.98:31,0,14	1/1:6,0:2:2.97:20,3,0	0/0:22,1:23:0.92:0,1,3	0/0:27,0:22:10.72:0,11,83	0/0:46,0:45:99:0,116,2795	0/0:25,0:23:60.12:0,60,1589	0/0:83,0:80:99:0,152,4516	0/0:38,0:36:87.03:0,87,2372	0/1:11,28:36:81.05:1396,0,81	1/1:20,0:19:21.02:349,21,0	./.
chr10	78440892	.	CACACAA	C	1075.20	PASS	AB=0.958;AC=8;AF=0.148;AN=54;BaseQRankSum=8.589;DP=943;FS=15.707;HRun=0;HaplotypeScore=301.7494;InbreedingCoeff=0.3276;MQ=46.38;MQ0=74;MQRankSum=-6.237;QD=8.08;ReadPosRankSum=-3.147;VQSLOD=0.8771;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:53:99:0,133,3677	0/0:15,0:13:31.75:0,32,699	0/0:36,0:2:6.02:0,6,172	./.	0/0:25,0:24:53.98:0,54,1443	0/0:24,0:21:48.88:0,49,1273	0/0:34,0:29:58.17:0,58,1444	0/0:53,0:41:41.43:0,41,1714	0/0:39,0:38:50.51:0,51,1134	0/0:47,0:40:99:0,109,3116	0/0:28,0:23:52.24:0,52,1165	0/0:39,0:39:99:0,108,2855	0/0:50,0:50:99:0,129,3580	0/0:46,0:42:99:0,101,2194	0/0:42,0:40:80.11:0,80,2273	0/0:31,0:30:67.27:0,67,1484	0/0:35,0:35:89.57:0,90,2064	0/1:7,1:5:47.86:78,0,48	0/1:13,0:6:5.18:98,0,5	1/1:8,13:21:3.05:58,3,0	0/1:31,2:28:71.38:71,0,82	0/0:50,0:49:99:0,134,3332	0/0:25,0:23:69.14:0,69,1923	0/0:75,0:72:99:0,161,4913	0/0:37,0:34:90.04:0,90,2544	0/1:39,0:35:99:535,0,141	1/1:5,14:18:7.47:366,7,0	0/0:4,0:4:5.92:0,6,39
chr10	78440898	.	AAC	A	85.47	PASS	AB=0.943;AC=4;AF=0.074;AN=54;BaseQRankSum=9.308;DP=969;FS=18.261;HRun=0;HaplotypeScore=251.8157;InbreedingCoeff=-0.0769;MQ=46.35;MQ0=82;MQRankSum=-9.053;QD=0.81;ReadPosRankSum=-2.119;VQSLOD=0.8680;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:53:99:0,120,1999	0/0:15,0:13:24:0,24,359	0/0:31,0:2:6.02:0,6,78	./.	0/0:22,0:21:47.70:0,48,779	0/0:27,0:25:55.45:0,55,866	0/0:35,0:28:50.25:0,50,854	0/0:56,0:44:47.92:0,48,1122	0/0:42,0:39:35.87:0,36,682	0/0:43,0:38:98.81:0,99,1587	0/0:32,0:28:41.48:0,41,674	0/0:41,0:40:99:0,99,1583	0/0:53,0:53:99:0,126,2016	0/0:45,0:41:72.25:0,72,1213	0/0:41,0:38:69.22:0,69,1126	0/0:31,0:30:47.99:0,48,775	0/0:36,0:36:81.75:0,82,1310	0/1:8,0:5:3.54:4,0,72	0/0:20,0:6:14.88:0,15,174	0/0:22,0:21:5.13:0,5,23	0/1:25,11:27:50.06:135,0,50	0/0:49,0:48:99:0,115,1841	0/0:28,0:26:63.20:0,63,1028	0/0:79,0:78:99:0,175,2905	0/0:36,0:32:78.27:0,78,1318	0/1:42,0:37:13.30:13,0,420	0/1:17,0:16:20.06:33,0,20	0/0:5,0:5:13.25:0,13,155
chr10	78440922	.	G	GAC	355.12	PASS	AB=0.921;AC=7;AF=0.135;AN=52;BaseQRankSum=7.896;DP=991;FS=17.914;HRun=0;HaplotypeScore=260.8219;InbreedingCoeff=0.2181;MQ=47.96;MQ0=83;MQRankSum=-7.724;QD=1.94;ReadPosRankSum=-3.101;VQSLOD=0.7926;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:60:99:0,106,1300	0/0:12,0:11:14.99:0,15,157	./.	./.	0/0:24,0:22:45.57:0,46,523	0/0:27,0:27:57.64:0,58,712	0/0:46,0:40:62.93:0,63,708	0/1:50,0:37:66.97:67,0,211	0/0:39,0:36:55.98:0,56,681	0/0:44,0:37:68.96:0,69,776	0/0:28,0:26:27.04:0,27,336	0/0:52,0:50:99:0,132,1629	0/0:47,0:47:99:0,117,1428	0/0:46,0:44:81.11:0,81,1008	0/0:40,0:37:90.12:0,90,987	0/0:41,0:38:75.22:0,75,927	0/0:45,0:46:99:0,108,1340	0/1:8,0:6:19.34:24,0,19	0/1:28,1:9:15.91:119,0,16	1/1:21,6:25:6.72:68,7,0	0/1:41,0:27:3.17:4,0,3	0/0:52,0:49:99:0,114,1390	0/0:26,0:25:51.15:0,51,631	0/0:73,0:72:99:0,151,1869	0/0:31,0:28:57.02:0,57,656	0/0:45,0:36:53.19:0,53,856	0/1:13,5:17:30.85:197,0,31	0/0:11,0:11:33:0,33,394
chr10	78440946	.	GAC	G	766.06	PASS	AB=0.780;AC=7;AF=0.130;AN=54;BaseQRankSum=4.523;DP=888;FS=15.372;HRun=0;HaplotypeScore=211.0136;InbreedingCoeff=0.4411;MQ=49.77;MQ0=74;MQRankSum=-5.415;QD=7.44;ReadPosRankSum=-4.493;VQSLOD=1.3454;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:45:80.50:0,81,1235	0/0:11,0:10:18.05:0,18,276	0/0:7,2:2:2.60:0,3,10	./.	0/0:23,0:20:44.70:0,45,706	0/0:31,0:31:65.39:0,65,997	0/0:43,0:37:60:0,60,980	0/1:30,3:23:99:335,0,146	0/0:33,0:31:13.56:0,14,430	0/0:37,0:30:72.17:0,72,1049	0/0:19,0:17:14.38:0,14,250	0/0:51,0:49:99:0,108,1741	0/0:42,0:41:84.16:0,84,1421	0/0:45,0:42:30.75:0,31,836	0/0:42,0:39:99:0,114,1807	0/0:35,1:33:81.67:0,82,799	0/0:48,0:48:90.97:0,91,1204	0/1:3,4:6:10.46:84,0,10	0/1:16,6:9:60.53:195,0,61	1/1:15,12:21:9.45:105,9,0	0/0:31,6:25:4.45:0,4,15	0/0:44,0:41:99:0,102,1663	0/0:22,0:21:42.12:0,42,645	0/0:61,2:61:32.12:0,32,2158	0/0:24,0:21:45.12:0,45,674	0/0:46,0:38:87.25:0,87,1331	1/1:7,6:11:15.52:181,16,0	0/0:16,0:16:48.16:0,48,797
chr10	78440989	.	A	AAC	1253.65	PASS	AB=0.692;AC=11;AF=0.196;AN=56;BaseQRankSum=5.914;DP=939;FS=34.986;HRun=0;HaplotypeScore=190.0985;InbreedingCoeff=0.9096;MQ=54.80;MQ0=28;MQRankSum=-8.619;QD=10.11;ReadPosRankSum=-0.630;VQSLOD=1.5415;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,120,1561	0/0:10,0:10:27.08:0,27,346	0/0:54,0:14:17.82:0,18,226	0/0:59,0:19:11.17:0,11,176	0/0:39,0:39:99:0,105,1339	0/0:30,0:29:55.05:0,55,848	0/0:36,0:36:80.47:0,80,1066	1/1:27,3:28:49.46:676,49,0	0/0:42,0:42:96.28:0,96,1256	0/0:45,0:44:99:0,120,1540	0/0:17,0:17:36:0,36,440	0/0:48,0:48:99:0,120,1561	0/0:30,0:29:72.20:0,72,932	0/0:31,0:31:75.11:0,75,964	0/0:49,0:49:99:0,141,1785	0/0:39,0:39:97.70:0,98,1300	0/0:43,0:43:99:0,102,1293	1/1:1,3:6:11.78:167,12,0	1/1:29,3:13:13.48:297,13,0	1/1:8,4:19:6.34:85,6,0	0/1:7,8:14:0.02:0,0,0	0/0:42,0:42:99:0,108,1373	0/0:21,0:21:57.12:0,57,720	0/0:54,0:53:96.06:0,96,1581	0/0:17,0:17:35.91:0,36,478	0/0:37,0:36:90.73:0,91,1144	1/1:1,5:6:12.04:190,12,0	0/0:22,0:22:26.31:0,26,702
chr10	78441009	.	GAC	G	5809.59	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=9.132;DP=907;FS=2.388;HRun=0;HaplotypeScore=170.5122;InbreedingCoeff=0.9632;MQ=52.64;MQ0=28;MQRankSum=0.757;QD=18.38;ReadPosRankSum=0.007;VQSLOD=4.6576;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,105,1730	0/0:9,0:9:21.05:0,21,325	0/0:44,0:15:13.18:0,13,210	0/0:42,0:15:8.87:0,9,138	0/0:38,0:37:93.29:0,93,1492	0/0:29,0:29:64.70:0,65,1004	0/0:37,1:38:48.89:0,49,1311	1/1:19,12:25:54.16:643,54,0	0/0:43,0:43:99:0,105,1689	0/0:41,0:39:99:0,99,1611	0/0:19,0:19:48.14:0,48,745	1/1:5,37:42:72.01:1014,72,0	1/1:5,29:33:54.07:687,54,0	0/0:33,1:34:40.15:0,40,1181	0/0:46,0:46:99:0,111,1815	0/0:41,1:42:57.95:0,58,1431	0/0:37,0:37:75.26:0,75,1242	1/1:4,3:7:6.47:62,6,0	1/1:31,5:12:20.98:227,21,0	1/1:9,12:20:32.94:322,33,0	1/1:24,6:26:17.79:186,18,0	1/1:6,27:33:60.39:797,60,0	1/1:3,21:24:45.14:573,45,0	1/1:20,28:47:99:1207,99,0	0/0:22,0:22:51.04:0,51,804	0/0:41,0:39:96.26:0,96,1499	1/1:7,3:10:8.95:90,9,0	0/0:17,0:17:39:0,39,589
chr10	78441069	.	T	TAC	6288.74	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-10.501;DP=911;FS=12.101;HRun=0;HaplotypeScore=142.1637;InbreedingCoeff=0.9981;MQ=56.22;MQ0=4;MQRankSum=-2.220;QD=28.85;ReadPosRankSum=-1.124;VQSLOD=5.9113;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:68.87:0,69,784	0/0:8,0:8:18.03:0,18,212	0/0:36,0:24:54.01:0,54,581	0/0:34,0:26:45.03:0,45,500	0/0:36,0:36:90.26:0,90,1111	0/0:28,0:28:75.18:0,75,907	0/0:25,0:25:57.13:0,57,668	1/1:10,31:41:93.16:1362,93,0	0/0:37,0:37:84.26:0,84,1052	0/0:38,0:38:81.25:0,81,1020	0/0:26,0:26:75.23:0,75,941	0/0:46,0:47:99:0,99,1167	0/0:41,0:41:87.14:0,87,1069	0/0:32,0:32:75.21:0,75,932	0/0:32,0:32:78.21:0,78,949	0/0:35,0:35:60.25:0,60,922	0/0:28,0:28:66.21:0,66,835	1/1:4,17:21:36.12:602,36,0	1/1:6,16:21:45.13:695,45,0	1/1:10,25:35:56.71:916,57,0	1/1:9,68:76:89.26:1830,89,0	0/0:31,0:31:66.03:0,66,780	0/0:25,0:25:47.74:0,48,579	0/0:33,0:33:78.17:0,78,954	0/0:34,0:34:90.75:0,91,1131	0/0:47,0:47:99:0,129,1600	1/1:3,18:21:54.18:884,54,0	0/0:12,0:12:27.09:0,27,343
chr10	78441760	.	G	GA	2523.77	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=14.290;DP=539;FS=1.882;HRun=1;HaplotypeScore=76.7698;InbreedingCoeff=0.4446;MQ=75.79;MQ0=0;MQRankSum=-0.930;QD=8.70;ReadPosRankSum=3.796;VQSLOD=1.2990;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:71.66:0,72,1062	0/0:10,0:10:30.06:0,30,370	0/0:9,0:9:24.03:0,24,256	0/0:13,0:14:19.63:0,20,211	0/0:23,0:23:68.86:0,69,831	0/0:21,0:21:50.19:0,50,666	0/0:14,0:14:39.12:0,39,491	0/1:26,0:26:36.28:36,0,183	0/1:18,0:18:19.37:61,0,19	0/0:15,0:15:45.11:0,45,531	0/0:16,0:16:48.13:0,48,593	1/1:16,3:20:34.57:355,35,0	1/1:14,1:15:30.04:298,30,0	1/1:16,0:16:29.45:86,29,0	0/0:19,0:19:54.12:0,54,641	0/1:21,0:21:20.82:64,0,21	0/1:11,0:11:27.60:28,0,87	0/1:21,0:21:30.25:72,0,30	0/0:19,0:19:2.82:0,3,252	0/1:25,0:25:47.50:48,0,138	1/1:17,0:17:29.59:92,30,0	1/1:24,0:24:62.65:547,63,0	1/1:19,1:20:47.68:429,48,0	1/1:27,0:27:54.08:512,54,0	0/0:18,0:18:54.13:0,54,646	0/0:30,0:30:87.23:0,87,1051	0/1:29,0:29:29.99:96,0,30	0/0:9,0:9:27.09:0,27,348
chr10	78441761	.	A	AT	5768.23	PASS	AB=0.639;AC=28;AF=0.500;AN=56;BaseQRankSum=-1.625;DP=545;FS=0.734;HRun=10;HaplotypeScore=69.5651;InbreedingCoeff=0.8872;MQ=76.40;MQ0=0;MQRankSum=-0.484;QD=18.43;ReadPosRankSum=0.023;VQSLOD=5.3417;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:32:44.55:0,45,549	0/0:10,0:10:26.97:0,27,222	0/0:9,0:9:17.97:0,18,146	0/0:14,0:15:14.65:0,15,144	0/0:23,0:23:58.41:0,58,491	0/0:20,1:21:18.88:0,19,359	0/0:14,0:14:38.93:0,39,316	1/1:10,16:26:41.12:470,41,0	1/1:2,17:19:36.09:384,36,0	0/0:15,0:15:35.91:0,36,290	0/0:16,0:16:41.95:0,42,345	1/1:4,0:20:34.07:188,34,0	1/1:2,0:16:32.07:192,32,0	1/1:0,16:16:45.11:480,45,0	0/0:20,0:20:44.90:0,45,364	1/1:2,19:21:35.51:583,36,0	0/1:4,7:11:0.58:200,0,1	1/1:3,16:21:50.83:509,51,0	0/1:9,9:18:16.22:241,0,16	1/1:8,20:28:51.10:533,51,0	1/1:0,17:17:42.11:448,42,0	1/1:0,0:24:52.41:303,52,0	1/1:1,0:20:46.46:282,46,0	1/1:1,0:27:51.87:281,52,0	0/0:17,0:18:43.94:0,44,344	0/0:30,0:30:71.88:0,72,591	1/1:4,25:29:47.74:675,48,0	0/0:9,0:9:26.97:0,27,222
chr10	78441874	.	AAAAAGAAAAG	A	970.61	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.384;DP=638;FS=7.833;HRun=0;HaplotypeScore=189.4468;InbreedingCoeff=0.9672;MQ=84.62;MQ0=0;MQRankSum=-0.974;QD=37.33;ReadPosRankSum=-3.338;VQSLOD=2.1247;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.17:0,60,2670	0/0:15,0:15:36.11:0,36,1484	0/0:41,0:31:65.20:0,65,1819	0/0:44,0:34:55.74:0,56,1169	0/0:29,0:28:75.22:0,75,3235	0/0:23,0:23:60.19:0,60,2650	0/0:21,0:21:51.15:0,51,2257	1/1:7,19:26:54.01:1065,54,0	0/0:12,0:12:27.08:0,27,1193	0/0:29,0:29:84.27:0,84,3707	0/0:22,0:22:63.19:0,63,2458	0/0:19,0:19:48.13:0,48,1952	0/0:30,0:30:72.22:0,72,3379	0/0:18,0:18:48.15:0,48,2249	0/0:18,0:18:42.13:0,42,1987	0/0:19,0:19:45.15:0,45,2025	0/0:18,0:18:39.12:0,39,1874	0/0:26,0:26:72.20:0,72,3172	0/0:13,0:13:30.08:0,30,1112	0/0:27,0:27:57.18:0,57,2328	0/0:9,0:9:27.08:0,27,1187	0/0:17,0:17:30.09:0,30,1200	0/0:31,0:31:80.98:0,81,3444	0/0:28,0:28:75.17:0,75,3223	0/0:24,0:23:63.19:0,63,2681	0/0:25,0:25:69.20:0,69,2723	0/0:26,0:26:63.17:0,63,2703	0/0:4,0:4:12.04:0,12,608
chr10	78442483	.	C	CCCTT	4272.14	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=3.628;DP=505;FS=1.399;HRun=0;HaplotypeScore=144.1607;InbreedingCoeff=0.2073;MQ=46.75;MQ0=15;MQRankSum=-4.476;QD=13.02;ReadPosRankSum=-2.277;VQSLOD=4.1090;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:44.39:0,44,582	0/1:6,0:6:34.21:34,0,37	0/0:33,0:10:17:0,17,142	0/0:33,0:7:2.35:0,2,13	0/1:17,0:17:24.52:63,0,25	0/0:23,0:23:51.16:0,51,841	0/0:17,0:17:45.10:0,45,649	1/1:30,0:29:59.48:466,59,0	1/1:14,3:16:36.40:641,36,0	0/1:18,0:18:1.43:217,0,1	0/1:12,0:12:2.36:80,0,2	0/1:9,0:12:20.85:21,0,79	0/1:10,0:16:39.09:39,0,265	1/1:11,2:12:30.53:516,31,0	0/1:16,0:16:66.32:66,0,123	1/1:1,9:10:8.50:109,9,0	1/1:5,15:20:8.81:426,9,0	0/1:14,0:13:47.49:156,0,47	1/1:15,0:15:23.85:185,24,0	1/1:27,0:27:40.79:517,41,0	1/1:9,0:9:23.45:261,23,0	0/0:15,0:19:3.41:0,3,250	0/1:18,0:22:66.85:67,0,187	0/1:16,0:16:9:9,0,148	0/1:19,0:19:67.10:67,0,122	0/0:20,0:20:31.14:0,31,699	1/1:16,0:15:33.37:331,33,0	0/0:15,0:14:36.09:0,36,551
chr10	78442505	.	CTT	C	1412.10	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=0.364;DP=474;FS=12.445;HRun=3;HaplotypeScore=147.2382;InbreedingCoeff=0.8763;MQ=46.36;MQ0=18;MQRankSum=0.984;QD=14.26;ReadPosRankSum=1.657;VQSLOD=-0.1314;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:46.63:0,47,715	0/0:5,0:5:12:0,12,133	0/0:14,0:5:14.62:0,15,130	./.	0/0:14,0:14:34.93:0,35,347	0/0:20,0:20:60.20:0,60,1118	0/0:21,0:21:63.13:0,63,1005	0/0:24,0:18:44.59:0,45,395	0/0:23,0:22:55.60:0,56,625	0/0:18,0:17:45.12:0,45,493	0/0:15,0:15:39.69:0,40,311	1/1:14,0:14:24.02:146,24,0	1/1:12,2:13:35.30:283,35,0	0/0:16,0:16:18.39:0,18,353	0/0:12,0:12:30.18:0,30,282	0/1:13,0:13:6.84:7,0,85	0/0:27,0:26:46.65:0,47,685	0/0:15,0:14:37.11:0,37,474	0/0:15,0:13:31.77:0,32,329	0/0:31,0:31:50.87:0,51,482	0/0:8,0:8:20.89:0,21,216	1/1:10,7:16:44.27:446,44,0	1/1:17,7:23:55.23:453,55,0	1/1:11,6:15:8.70:250,9,0	0/0:20,0:20:51.12:0,51,409	0/0:21,0:21:60.18:0,60,749	0/0:14,0:14:33.37:0,33,210	0/0:14,0:12:30.04:0,30,416
chr10	78442507	.	TTC	T	2150.86	PASS	AB=1.000;AC=16;AF=0.296;AN=54;BaseQRankSum=4.504;DP=475;FS=4.757;HRun=0;HaplotypeScore=144.1734;InbreedingCoeff=0.3749;MQ=46.72;MQ0=17;MQRankSum=-1.813;QD=10.97;ReadPosRankSum=4.369;VQSLOD=3.0056;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:42.14:0,42,635	0/0:4,0:4:8.46:0,8,45	0/0:14,0:5:6.02:0,6,79	./.	0/1:14,0:14:14.13:14,0,113	0/0:21,0:21:60.19:0,60,969	0/0:21,0:21:57.18:0,57,856	0/0:22,0:16:16.01:0,16,98	0/0:23,0:22:54.14:0,54,671	0/0:18,0:17:7.87:0,8,149	0/1:15,0:15:26.66:27,0,51	1/1:9,5:14:28.87:307,29,0	1/1:5,9:13:36.07:404,36,0	0/0:16,0:16:36.52:0,37,416	0/1:13,0:13:26.77:27,0,84	0/0:13,0:13:15.51:0,16,178	0/0:28,0:27:45.15:0,45,689	0/0:15,0:14:5.05:0,5,290	0/0:13,0:11:3.34:0,3,171	0/1:31,0:31:43.75:44,0,169	0/0:8,0:8:5.89:0,6,82	1/1:12,6:17:40.92:455,41,0	1/1:9,17:25:51.14:612,51,0	1/1:12,5:15:13.57:332,14,0	0/1:19,0:19:45.12:45,0,73	0/0:20,0:20:23.67:0,24,373	0/1:15,0:15:32.93:64,0,33	0/0:15,0:13:12.28:0,12,217
chr10	78442509	.	C	CTT	1916.10	PASS	AB=0.996;AC=23;AF=0.426;AN=54;BaseQRankSum=7.140;DP=475;FS=4.260;HRun=3;HaplotypeScore=144.4706;InbreedingCoeff=0.0016;MQ=46.70;MQ0=17;MQRankSum=-4.658;QD=6.41;ReadPosRankSum=2.072;VQSLOD=0.4837;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.13:0,45,639	1/1:4,0:4:9.41:69,9,0	0/0:14,0:5:11.31:0,11,104	./.	0/1:13,0:13:32.16:77,0,32	0/0:23,0:23:66.18:0,66,947	0/0:20,0:20:60.18:0,60,858	0/1:20,0:14:39.07:105,0,39	0/1:23,0:22:49.23:49,0,190	1/1:18,0:17:24.17:284,24,0	0/1:15,0:15:34.11:34,0,41	1/1:8,6:14:9.40:187,9,0	1/1:14,1:14:3.31:192,3,0	0/1:17,0:17:52.78:53,0,117	0/1:13,0:13:0.20:79,0,0	0/0:13,0:13:7.28:0,7,92	0/0:27,0:26:7:0,7,391	0/0:15,0:14:3.48:0,3,243	0/1:14,0:12:18.18:18,0,129	0/1:31,0:31:45.08:45,0,82	0/1:8,0:8:21.92:86,0,22	0/1:17,0:16:3.39:162,0,3	1/1:24,1:24:3.52:365,4,0	0/1:16,1:16:9.80:147,0,10	0/1:19,0:19:33.65:42,0,34	0/0:21,0:21:39.48:0,39,585	0/1:15,0:15:3.69:90,0,4	0/0:15,0:13:30.07:0,30,397
chr10	78442512	.	TCTC	T	1281.81	PASS	AB=0.882;AC=16;AF=0.296;AN=54;BaseQRankSum=9.355;DP=464;FS=4.311;HRun=0;HaplotypeScore=152.2139;InbreedingCoeff=0.2816;MQ=46.90;MQ0=16;MQRankSum=-7.320;QD=6.85;ReadPosRankSum=6.265;VQSLOD=1.9706;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.15:0,45,950	1/1:4,0:4:3.54:19,4,0	0/0:12,0:4:12.03:0,12,169	./.	0/1:9,5:14:71.51:77,0,72	0/0:24,0:24:72.25:0,72,1622	0/0:19,0:19:57.20:0,57,1248	0/0:13,0:8:6.78:0,7,40	0/0:23,0:22:60.19:0,60,1022	0/1:13,3:15:16.27:73,0,16	1/1:5,10:15:31.38:251,31,0	0/1:14,0:14:5.11:26,0,5	0/0:15,0:14:12.90:0,13,126	0/0:17,0:17:47.80:0,48,692	0/1:9,4:13:6.33:125,0,6	0/0:13,0:13:17.98:0,18,275	0/0:25,0:26:47.91:0,48,1002	0/1:12,2:13:42.99:43,0,318	0/1:12,0:10:30.27:30,0,218	0/1:25,6:31:99:184,0,110	0/0:5,3:8:14.50:0,15,125	0/1:16,0:15:16.73:17,0,25	0/0:27,0:26:24.66:0,25,198	0/0:16,1:15:12.78:0,13,54	1/1:11,11:22:41.43:348,41,0	0/0:20,0:20:57.44:0,57,778	1/1:8,7:16:20.12:261,20,0	0/0:15,0:13:29.69:0,30,444
chr10	78442515	.	CTCTTTCTTTCTT	C	3104.85	PASS	AB=1.000;AC=13;AF=0.260;AN=50;BaseQRankSum=-0.224;DP=455;FS=11.831;HRun=0;HaplotypeScore=211.9012;InbreedingCoeff=0.2532;MQ=48.58;MQ0=16;MQRankSum=-5.899;QD=19.90;ReadPosRankSum=-3.050;VQSLOD=0.9409;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:39:0,39,1436	0/1:5,0:5:17.23:44,0,17	0/0:11,0:3:0:0,0,0	./.	0/1:13,0:13:77.90:183,0,78	0/0:23,0:23:60.21:0,60,3092	0/0:19,0:19:45.15:0,45,1896	./.	0/0:22,0:21:45.14:0,45,2114	0/1:15,0:14:22.99:126,0,23	0/1:15,0:15:37.08:325,0,37	0/0:13,0:13:27.09:0,27,654	0/0:16,0:15:42.14:0,42,1180	0/0:15,0:15:36.12:0,36,1670	0/1:13,0:13:90.03:126,0,90	0/0:13,0:13:18.53:0,19,896	0/0:25,0:25:12.33:0,12,2052	1/1:14,0:13:6.01:146,6,0	1/1:7,6:11:21.06:437,21,0	1/1:16,15:31:7.39:638,7,0	./.	0/0:16,0:15:32.69:0,33,822	0/0:29,0:28:66.38:0,66,1666	0/0:17,0:15:35.59:0,36,779	0/1:22,0:22:99:502,0,134	0/0:10,0:20:33.11:0,33,860	0/1:15,0:15:3.62:733,0,4	0/0:10,0:13:9.03:0,9,232
chr10	78442517	.	CTT	C	759.78	PASS	AB=0.979;AC=16;AF=0.296;AN=54;BaseQRankSum=7.271;DP=447;FS=1.884;HRun=3;HaplotypeScore=141.2037;InbreedingCoeff=-0.0978;MQ=48.71;MQ0=13;MQRankSum=-2.623;QD=3.06;ReadPosRankSum=7.276;VQSLOD=-0.3562;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.68:0,52,731	0/0:5,0:5:6.79:0,7,45	0/0:9,0:3:6.86:0,7,59	./.	0/0:13,0:13:2.79:0,3,129	0/0:24,0:24:72.22:0,72,1202	0/0:19,0:19:54.18:0,54,899	0/0:10,0:5:14.98:0,15,169	0/0:20,0:20:27.83:0,28,659	0/1:17,0:16:40.71:41,0,72	0/1:15,0:15:0.82:1,0,54	1/1:13,1:14:1.70:136,2,0	0/1:16,0:15:20.84:143,0,21	0/0:15,0:15:38.71:0,39,556	0/1:13,0:13:8.27:8,0,69	0/0:12,0:12:21.05:0,21,301	0/0:24,0:24:45.15:0,45,850	0/0:13,0:13:17.11:0,17,272	0/1:11,1:10:6.43:6,0,126	0/1:29,2:31:49.81:50,0,172	0/0:7,0:7:5.99:0,6,59	1/1:15,0:14:32.83:148,33,0	0/1:29,0:28:65.31:157,0,65	0/1:17,0:15:35.24:79,0,35	0/1:22,0:22:2.17:2,0,144	0/1:19,0:19:59.72:60,0,256	0/1:13,2:15:39.37:72,0,39	0/1:13,0:11:5.76:6,0,168
chr10	78442521	.	CTTTCTT	C	996.95	PASS	AB=0.985;AC=11;AF=0.204;AN=54;BaseQRankSum=7.524;DP=447;FS=7.313;HRun=0;HaplotypeScore=167.9455;InbreedingCoeff=-0.0018;MQ=49.10;MQ0=14;MQRankSum=-6.188;QD=6.19;ReadPosRankSum=2.860;VQSLOD=1.5910;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:44.86:0,45,1298	0/0:4,0:4:4.62:0,5,21	0/1:8,0:3:7.75:8,0,37	./.	0/1:13,0:13:46.98:47,0,83	0/0:26,0:26:78.25:0,78,2394	0/0:18,0:18:54.17:0,54,1474	0/0:11,0:6:17.94:0,18,219	0/0:20,0:20:57.15:0,57,1587	0/1:15,0:14:9.13:76,0,9	0/1:16,0:16:8.71:95,0,9	0/0:14,0:14:22.27:0,22,364	0/0:16,0:15:44.88:0,45,772	0/0:14,0:14:39.12:0,39,1166	0/1:13,0:13:19.74:98,0,20	0/0:12,0:12:21.07:0,21,693	0/0:25,0:25:48.16:0,48,1606	0/1:15,0:15:49.96:50,0,267	0/1:11,1:9:51.36:140,0,51	0/1:29,2:30:79.80:189,0,80	0/0:7,0:7:6.02:0,6,73	0/0:15,0:14:35.59:0,36,555	0/0:29,0:28:74.91:0,75,1403	0/0:17,0:15:39.02:0,39,677	0/1:22,0:22:20.59:128,0,21	0/0:18,0:18:47.97:0,48,423	1/1:14,2:16:17.42:315,17,0	0/0:13,0:11:22.84:0,23,240
chr10	78444104	.	A	AG	8296.88	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-9.304;DP=772;FS=5.218;HRun=0;HaplotypeScore=73.6322;InbreedingCoeff=0.9998;MQ=84.85;MQ0=0;MQRankSum=-1.042;QD=44.85;ReadPosRankSum=-0.118;VQSLOD=4.9136;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,1931	0/0:13,0:13:39.13:0,39,545	0/0:32,0:32:90.27:0,90,1216	0/0:20,0:20:40.04:0,40,626	0/0:24,0:24:72.24:0,72,1006	0/0:18,0:18:54.17:0,54,738	0/0:31,0:31:90.28:0,90,1241	1/1:1,38:38:99:1774,114,0	0/0:36,0:36:99:0,108,1508	0/0:25,0:25:75.25:0,75,1047	0/0:20,0:20:60.19:0,60,824	1/1:1,25:26:72.25:1151,72,0	1/1:0,31:31:90.31:1439,90,0	0/0:27,0:27:81.26:0,81,1115	0/0:33,0:33:99:0,99,1384	0/0:33,0:33:99:0,99,1383	0/0:41,0:41:99:0,123,1702	0/0:15,0:15:45.15:0,45,630	0/0:25,0:25:75.25:0,75,1049	0/0:19,0:19:57.19:0,57,797	0/0:32,0:32:90.27:0,90,1225	1/1:1,38:39:99:1726,108,0	1/1:0,17:17:51.17:815,51,0	1/1:0,33:33:87.30:1391,87,0	0/0:18,0:18:54.18:0,54,754	0/0:36,0:35:99:0,108,1509	0/0:32,0:31:96.29:0,96,1318	0/0:9,0:9:27.07:0,27,359
chr10	78446042	.	GA	G	1611.72	PASS	AB=0.900;AC=11;AF=0.196;AN=56;BaseQRankSum=7.441;DP=573;FS=0.977;HRun=9;HaplotypeScore=59.1313;InbreedingCoeff=0.9164;MQ=75.11;MQ0=0;MQRankSum=-0.448;QD=17.52;ReadPosRankSum=2.094;VQSLOD=3.8914;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:63.15:0,63,712	0/0:4,0:4:12.02:0,12,128	0/0:13,0:13:30.02:0,30,303	0/1:8,1:9:2.91:3,0,196	0/0:24,0:24:60.12:0,60,646	0/0:20,0:20:48.14:0,48,554	0/0:17,0:17:48.10:0,48,539	0/0:36,0:36:58.42:0,58,413	0/0:19,0:19:48.14:0,48,553	0/0:21,0:21:51.14:0,51,580	0/0:17,0:18:47.20:0,47,583	1/1:2,12:14:33.02:302,33,0	1/1:1,13:14:36.02:329,36,0	0/0:28,0:28:75.19:0,75,839	0/0:21,0:21:63.18:0,63,717	0/0:18,0:18:48.14:0,48,545	0/0:30,2:32:32.32:0,32,870	0/0:27,0:27:72.17:0,72,816	0/0:25,0:25:63.19:0,63,727	0/0:24,1:25:38.74:0,39,700	0/0:17,0:17:51.13:0,51,577	1/1:3,19:22:48.02:439,48,0	1/1:2,15:17:45.02:412,45,0	1/1:2,14:16:33.01:302,33,0	0/0:35,0:36:92.99:0,93,993	0/0:21,0:21:54.13:0,54,598	0/0:22,0:22:32.86:0,33,611	0/0:11,0:11:33.10:0,33,381
chr10	78447847	.	CGTGTGTGT	C	1390.06	PASS	AB=0.734;AC=8;AF=0.154;AN=52;BaseQRankSum=5.134;DP=643;FS=7.616;HRun=0;HaplotypeScore=142.5383;InbreedingCoeff=0.5804;MQ=62.41;MQ0=9;MQRankSum=-6.839;QD=10.53;ReadPosRankSum=0.893;VQSLOD=1.4170;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:36.09:0,36,963	0/0:12,0:12:21.04:0,21,653	./.	./.	0/0:13,0:14:12.01:0,12,161	0/0:30,0:30:24.05:0,24,505	0/0:28,0:29:33.09:0,33,862	0/0:32,0:32:17.19:0,17,178	1/1:16,9:24:18.06:450,18,0	0/0:22,0:22:27.84:0,28,355	0/0:14,0:14:20.96:0,21,350	0/0:11,0:18:14.97:0,15,237	0/0:11,0:14:17.92:0,18,180	1/1:10,5:16:12.04:281,12,0	0/0:7,0:16:2.18:0,2,106	1/1:13,13:26:20.92:470,21,0	0/1:27,10:37:23.26:190,0,23	0/1:15,12:27:99:146,0,116	0/0:13,0:13:7.79:0,8,157	0/0:20,0:20:24.07:0,24,592	0/0:35,0:35:34.62:0,35,795	0/0:22,0:23:18.03:0,18,238	0/0:8,0:14:14.70:0,15,241	0/0:23,0:40:48.01:0,48,693	0/0:11,0:17:13.55:0,14,128	0/0:21,0:22:9:0,9,212	0/0:14,0:16:12.93:0,13,389	0/0:4,0:6:9.03:0,9,142
chr10	78449887	.	GGTGTGTGTGTGTGTGT	G	2217.03	PASS	AB=0.787;AC=12;AF=0.214;AN=56;BaseQRankSum=6.012;DP=586;FS=1.868;HRun=0;HaplotypeScore=198.0987;InbreedingCoeff=0.6161;MQ=63.59;MQ0=31;MQRankSum=-4.780;QD=18.95;ReadPosRankSum=2.928;VQSLOD=2.7473;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:45.15:0,45,2916	0/0:5,0:6:12.04:0,12,631	0/0:45,0:21:6.49:0,6,118	0/0:38,0:17:16.61:0,17,357	0/0:14,0:19:33.10:0,33,1666	0/0:21,0:22:30.10:0,30,1736	0/0:21,0:19:24.08:0,24,1523	0/0:33,0:32:41.17:0,41,1954	1/1:9,11:21:15.05:639,15,0	0/0:26,0:24:42.14:0,42,2261	0/0:9,0:16:14.08:0,14,635	0/0:13,0:18:21.54:0,22,1259	0/0:7,0:13:12.04:0,12,636	1/1:7,5:12:6.02:258,6,0	0/0:10,0:19:24.08:0,24,1337	1/1:7,5:12:9.03:395,9,0	0/1:22,1:23:53.49:245,0,53	0/1:5,7:12:99:124,0,126	0/0:12,0:13:14.73:0,15,741	0/0:8,0:9:3.01:0,3,67	0/0:23,0:24:24.08:0,24,1277	0/0:11,0:10:6.02:0,6,300	0/0:17,0:23:21.54:0,22,1332	0/0:17,0:36:30.57:0,31,1915	0/0:11,0:14:15.05:0,15,954	1/1:16,6:22:18.89:657,19,0	0/0:10,0:14:18.04:0,18,880	1/1:12,0:10:3.01:61,3,0
chr10	78450074	.	GCCC	G	3601.36	PASS	AB=0.691;AC=25;AF=0.446;AN=56;BaseQRankSum=-0.679;DP=437;FS=8.949;HRun=12;HaplotypeScore=89.8764;InbreedingCoeff=0.7978;MQ=79.20;MQ0=1;MQRankSum=0.103;QD=16.22;ReadPosRankSum=4.496;VQSLOD=1.6709;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:9.03:0,9,176	1/1:3,10:13:21.04:265,21,0	0/0:24,0:19:29.97:0,30,623	0/1:21,0:18:2.42:2,0,206	1/1:2,12:14:36.11:452,36,0	0/0:11,0:15:33.08:0,33,509	0/0:12,0:14:30.10:0,30,512	0/0:18,0:20:30.06:0,30,467	0/0:2,0:12:25.15:0,25,187	1/1:1,16:17:48.13:593,48,0	1/1:1,15:16:39.11:487,39,0	1/1:1,0:13:23.52:144,24,0	1/1:2,0:8:17.64:108,18,0	0/0:4,0:15:17.97:0,18,178	1/1:2,13:15:33.09:417,33,0	0/0:3,0:10:20.93:0,21,163	0/0:8,0:23:38:0,38,283	0/0:4,0:13:29.80:0,30,223	0/1:3,2:15:20.50:63,0,21	0/1:2,2:29:11.99:78,0,12	0/0:5,0:16:14.69:0,15,52	1/1:4,0:17:35.29:215,35,0	1/1:1,0:16:38.71:234,39,0	1/1:2,0:12:26.47:162,26,0	1/1:4,10:14:30.07:379,30,0	0/0:11,0:13:30.06:0,30,473	0/0:1,0:19:17.44:0,17,37	0/0:12,0:13:33.08:0,33,507
chr10	78450193	.	GTT	G	3962.08	PASS	AB=0.955;AC=27;AF=0.482;AN=56;BaseQRankSum=4.631;DP=511;FS=37.194;HRun=14;HaplotypeScore=76.4845;InbreedingCoeff=0.8999;MQ=78.05;MQ0=4;MQRankSum=-0.631;QD=15.30;ReadPosRankSum=6.424;VQSLOD=-0.2091;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:34:58.51:0,59,1046	1/1:3,7:11:26.74:233,27,0	0/0:26,0:22:39.47:0,39,409	0/1:20,1:14:4.88:5,0,121	1/1:3,11:16:3.14:194,3,0	0/0:12,0:13:29.59:0,30,386	0/0:16,0:18:50.11:0,50,611	0/0:5,0:18:34.32:0,34,184	1/1:3,9:12:34.57:304,35,0	1/1:7,8:15:33.62:287,34,0	1/1:6,3:10:11.02:109,11,0	0/0:13,0:14:29.65:0,30,335	0/0:14,0:14:27.09:0,27,378	1/1:8,11:23:22.05:329,22,0	1/1:7,11:18:29.85:323,30,0	1/1:4,8:12:17.99:167,18,0	1/1:4,39:44:96.37:1019,96,0	1/1:8,15:25:20.60:352,21,0	0/0:13,0:13:25.70:0,26,294	0/0:11,0:14:37.28:0,37,417	0/0:15,1:16:8.34:0,8,416	0/0:14,0:15:38.19:0,38,422	0/0:18,0:23:43:0,43,526	0/0:16,0:16:38.80:0,39,458	1/1:5,9:14:35.60:303,36,0	1/1:4,1:27:58.48:284,58,0	0/0:14,0:16:39.07:0,39,507	1/1:4,0:8:11.12:53,11,0
chr10	78450258	.	AGGTGG	A	12792.87	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=11.401;DP=481;FS=4.287;HRun=0;HaplotypeScore=105.4310;InbreedingCoeff=0.9571;MQ=70.62;MQ0=0;MQRankSum=-7.764;QD=40.36;ReadPosRankSum=4.693;VQSLOD=4.4543;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:66.21:0,66,1862	1/1:4,7:11:30.10:584,30,0	0/0:15,0:14:18.05:0,18,405	0/0:26,0:23:2.86:0,3,880	1/1:0,9:9:17.99:310,18,0	0/0:7,0:7:21.07:0,21,617	0/0:21,0:21:63.21:0,63,1794	1/1:5,12:17:36.09:602,36,0	1/1:1,14:15:42.01:774,42,0	1/1:4,7:11:21.06:377,21,0	1/1:4,7:11:24.01:426,24,0	1/1:3,12:15:36.12:700,36,0	1/1:2,6:8:21.07:409,21,0	1/1:3,9:12:30.03:544,30,0	1/1:10,24:34:69.18:1304,69,0	1/1:0,17:17:41.99:818,42,0	1/1:13,31:44:81.28:1533,81,0	1/1:6,10:16:39.04:632,39,0	0/0:15,0:15:24.05:0,24,585	0/0:12,0:12:27.09:0,27,760	0/0:22,0:22:63.21:0,63,1739	1/1:3,16:19:39.13:750,39,0	1/1:6,11:17:35.81:642,36,0	1/1:4,18:22:39.02:681,39,0	1/1:2,11:13:33.11:636,33,0	1/1:9,12:21:48.12:896,48,0	0/0:15,0:15:36.12:0,36,1058	1/1:2,3:5:9.03:175,9,0
chr10	78450262	.	GGGGT	G	4703.04	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=13.335;DP=456;FS=4.482;HRun=0;HaplotypeScore=118.3292;InbreedingCoeff=0.4416;MQ=67.44;MQ0=0;MQRankSum=-8.447;QD=15.78;ReadPosRankSum=7.595;VQSLOD=3.7416;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:77.72:0,78,1888	1/1:9,1:10:29.94:246,30,0	0/0:14,0:13:27.07:0,27,533	0/0:23,0:20:8.73:0,9,960	0/1:9,0:9:9.13:101,0,9	0/0:8,0:8:24.08:0,24,618	0/0:22,0:22:66.23:0,66,1708	0/1:14,0:14:52.74:179,0,53	1/1:15,0:15:22.88:299,23,0	0/1:10,0:10:48.13:120,0,48	0/1:11,0:11:23.13:144,0,23	1/1:15,0:15:4.97:260,5,0	1/1:7,0:7:20.95:171,21,0	1/1:11,1:12:13.79:205,14,0	1/1:29,2:31:31.72:519,32,0	1/1:17,0:17:41.48:342,41,0	1/1:39,0:39:2.24:532,2,0	1/1:16,0:16:3.07:196,3,0	0/0:11,0:11:33.09:0,33,697	0/0:12,0:12:30.10:0,30,748	0/0:22,0:22:66.23:0,66,1716	0/1:18,0:18:21.23:263,0,21	1/1:17,0:17:2.49:216,2,0	1/1:21,0:21:0.80:229,1,0	1/1:12,0:12:32.88:264,33,0	1/1:19,0:19:33.67:353,34,0	0/0:16,0:16:39.13:0,39,1016	0/1:5,0:5:11.60:61,0,12
chr10	78450267	.	GGGGT	G	4598.59	PASS	AB=0.962;AC=27;AF=0.482;AN=56;BaseQRankSum=13.829;DP=465;FS=8.041;HRun=0;HaplotypeScore=119.3883;InbreedingCoeff=0.1835;MQ=66.32;MQ0=0;MQRankSum=-8.270;QD=14.93;ReadPosRankSum=9.178;VQSLOD=2.5148;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:75.25:0,75,1837	1/1:10,0:10:29.94:245,30,0	0/0:13,0:12:24.03:0,24,485	0/0:23,0:20:41.52:0,42,919	0/1:11,0:11:60.18:98,0,60	0/0:8,0:8:24.08:0,24,614	0/0:26,0:26:78.26:0,78,1847	0/1:16,0:16:46.88:182,0,47	0/1:17,0:17:38.57:270,0,39	1/1:9,0:9:12.28:139,12,0	0/1:10,2:12:29.17:142,0,29	0/1:17,0:17:26.12:252,0,26	0/1:9,0:9:41.06:145,0,41	0/1:13,1:14:46.87:185,0,47	1/1:30,1:31:31.59:511,32,0	1/1:17,0:17:41.48:342,41,0	0/1:36,2:38:19.09:527,0,19	1/1:16,0:16:14.51:210,15,0	0/0:10,0:10:27.09:0,27,624	0/0:10,0:10:30.10:0,30,745	0/0:24,0:24:72.24:0,72,1771	0/1:18,0:18:8.88:264,0,9	0/1:15,2:17:10.49:214,0,10	1/1:18,2:20:20.28:255,20,0	1/1:12,1:13:1.87:231,2,0	0/1:18,1:19:26.01:314,0,26	0/0:14,0:14:39.13:0,39,1011	1/1:4,0:4:8.98:73,9,0
chr10	78450272	.	GGGGT	G	2539.61	PASS	AB=0.977;AC=22;AF=0.393;AN=56;BaseQRankSum=14.908;DP=486;FS=6.829;HRun=0;HaplotypeScore=129.2175;InbreedingCoeff=-0.2099;MQ=68.42;MQ0=0;MQRankSum=-7.760;QD=7.91;ReadPosRankSum=11.290;VQSLOD=0.2152;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.29:0,84,2139	0/1:9,2:11:9.28:136,0,9	0/0:13,0:12:27.96:0,28,461	0/0:24,0:21:36.63:0,37,905	0/1:12,0:12:55.94:56,0,123	0/0:10,0:10:30.10:0,30,759	0/0:30,0:30:90.30:0,90,2164	0/1:17,0:17:99:101,0,194	0/1:19,0:19:99:163,0,141	0/1:9,0:9:72.59:73,0,73	0/1:12,1:13:61.29:86,0,61	0/1:16,0:16:42.85:158,0,43	0/1:9,1:10:88.39:88,0,96	0/1:16,0:16:99:108,0,144	1/1:31,0:31:9.23:303,9,0	1/1:18,0:18:1.54:189,2,0	0/1:38,0:38:99:321,0,129	0/1:15,0:15:1.62:115,0,2	0/0:8,0:8:24.08:0,24,611	0/0:10,0:10:30.10:0,30,818	0/0:25,0:25:72.23:0,72,1894	0/1:18,0:18:56.74:161,0,57	0/1:15,1:16:51.19:127,0,51	0/1:23,0:23:99:139,0,104	0/1:14,0:14:46.04:140,0,46	0/1:21,0:21:87.33:195,0,87	0/0:16,0:16:45.15:0,45,1189	1/1:4,0:4:8.75:49,9,0
chr10	78451761	.	A	AT	986.43	PASS	AB=0.526;AC=9;AF=0.161;AN=56;BaseQRankSum=-0.589;DP=454;FS=2.245;HRun=1;HaplotypeScore=74.9253;InbreedingCoeff=0.8717;MQ=64.52;MQ0=2;MQRankSum=-0.470;QD=18.61;ReadPosRankSum=-0.852;VQSLOD=3.6495;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.19:0,60,778	0/0:10,0:10:28.68:0,29,147	0/0:2,0:2:6.02:0,6,76	0/0:5,0:5:11.95:0,12,131	0/0:27,0:27:77.61:0,78,405	0/0:20,0:20:54.17:0,54,698	0/0:17,0:17:48.16:0,48,621	0/0:31,0:31:36.01:0,36,206	0/0:14,0:12:27.04:0,27,256	0/0:20,0:20:53.24:0,53,258	0/0:21,0:21:51.03:0,51,258	1/1:1,9:9:18.05:214,18,0	1/1:2,20:23:40.10:586,40,0	0/0:11,0:11:20.37:0,20,166	0/0:22,0:22:51.77:0,52,270	0/0:6,0:6:15:0,15,134	0/0:16,0:16:34.05:0,34,250	0/0:16,0:16:38.58:0,39,326	0/0:19,0:19:57.18:0,57,736	0/0:22,0:22:66.21:0,66,855	0/0:12,0:12:33.11:0,33,423	1/1:1,3:4:10.27:105,10,0	0/1:1,9:10:0.04:125,0,0	1/1:1,5:6:9.03:112,9,0	0/0:17,0:17:45.42:0,45,227	0/0:25,0:25:72.12:0,72,736	0/0:26,0:26:78.25:0,78,1012	0/0:22,0:22:53.98:0,54,473
chr10	78451764	.	T	TA	3887.42	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=-6.714;DP=470;FS=0.396;HRun=1;HaplotypeScore=68.1527;InbreedingCoeff=0.6585;MQ=64.40;MQ0=2;MQRankSum=-1.230;QD=23.70;ReadPosRankSum=2.559;VQSLOD=3.6983;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.19:0,60,814	0/0:10,0:10:30.10:0,30,379	0/0:3,0:3:4.58:0,5,60	0/0:4,0:4:12.02:0,12,141	0/0:31,0:31:83.02:0,83,1026	0/0:19,0:19:54.16:0,54,718	0/0:17,0:17:51.15:0,51,669	0/0:35,0:35:93.96:0,94,1000	1/1:1,13:12:20.61:362,21,0	0/0:22,0:22:64.43:0,64,779	0/0:21,0:21:62.50:0,62,716	0/1:10,0:9:8.36:42,0,8	0/1:24,0:24:42.20:108,0,42	1/1:0,11:11:21.07:321,21,0	0/0:21,0:21:63.16:0,63,749	1/1:1,6:7:8.55:178,9,0	1/1:1,15:16:33.10:503,33,0	1/1:0,15:15:36.12:551,36,0	0/0:19,0:19:57.18:0,57,759	0/0:24,0:24:66.21:0,66,898	0/0:12,0:12:23.15:0,23,396	1/1:3,0:3:7.99:33,8,0	0/1:11,0:11:26.46:26,0,35	0/1:6,0:6:12.82:20,0,13	0/0:19,0:19:57.16:0,57,698	1/1:2,24:26:56.08:969,56,0	0/0:28,0:28:78.24:0,78,1056	1/1:1,20:21:47.71:775,48,0
chr10	78452773	.	TGGG	T	5124.84	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=5.692;DP=545;FS=2.367;HRun=11;HaplotypeScore=108.0126;InbreedingCoeff=0.9550;MQ=76.01;MQ0=0;MQRankSum=-8.998;QD=32.64;ReadPosRankSum=6.414;VQSLOD=4.1566;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:48.12:0,48,759	0/0:4,0:5:12.02:0,12,186	0/0:21,0:21:8.21:0,8,393	0/0:19,0:21:42.95:0,43,628	0/0:20,0:23:39.69:0,40,698	0/0:16,0:18:48.14:0,48,833	0/0:18,0:20:36.10:0,36,594	0/0:21,0:21:24.07:0,24,392	1/1:6,18:24:57.15:748,57,0	0/0:15,0:17:36.08:0,36,601	0/0:8,0:12:17.98:0,18,183	0/0:5,0:14:19.18:0,19,141	0/0:4,0:18:33.15:0,33,242	1/1:3,26:29:81.26:1064,81,0	0/0:25,0:26:34.36:0,34,592	1/1:3,20:23:60.17:781,60,0	1/1:3,22:26:63.08:787,63,0	1/1:2,15:17:45.09:572,45,0	0/0:7,0:15:29.35:0,29,212	0/0:5,0:23:52.13:0,52,444	0/0:7,0:30:33.63:0,34,240	0/0:4,0:12:20.61:0,21,148	0/0:3,0:9:5.99:0,6,51	0/0:7,0:19:22.17:0,22,165	0/0:14,0:17:27.07:0,27,473	1/1:7,22:30:14.53:864,15,0	0/0:4,0:21:31.61:0,32,220	1/1:0,8:8:24.08:309,24,0
chr10	78452817	.	CCA	C	6788.84	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.524;DP=552;FS=9.241;HRun=0;HaplotypeScore=96.7994;InbreedingCoeff=0.9966;MQ=90.44;MQ0=0;MQRankSum=-8.720;QD=42.43;ReadPosRankSum=3.749;VQSLOD=6.4882;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.30:0,87,1680	0/0:7,0:7:21.07:0,21,405	0/0:24,0:24:69.02:0,69,1226	0/0:26,0:26:72.24:0,72,1364	0/0:15,0:15:36.12:0,36,693	0/0:20,0:20:60.21:0,60,1150	0/0:20,0:20:57.20:0,57,1101	1/1:1,21:22:62.96:878,63,0	1/1:0,23:23:66.22:1010,66,0	0/0:18,0:18:54.19:0,54,1043	0/0:11,0:11:33.11:0,33,636	0/0:18,0:18:51.17:0,51,983	0/0:20,0:20:57.18:0,57,1066	1/1:0,15:15:45.15:688,45,0	0/0:20,0:20:60.21:0,60,1146	1/1:2,25:27:72.24:1102,72,0	1/1:0,25:25:69.23:1056,69,0	1/1:1,16:17:45.15:689,45,0	0/0:15,0:15:45.14:0,45,804	0/0:33,0:33:96.33:0,96,1808	0/0:33,0:33:84.29:0,84,1623	0/0:17,0:17:45.15:0,45,867	0/0:19,0:19:51.17:0,51,985	0/0:16,0:16:39.13:0,39,752	0/0:13,0:13:36.12:0,36,695	1/1:1,25:26:75.25:1138,75,0	0/0:18,0:18:48:0,48,911	1/1:0,5:5:15.05:229,15,0
chr10	78453503	.	AG	A	5789.85	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=18.946;DP=699;FS=4.918;HRun=3;HaplotypeScore=119.3041;InbreedingCoeff=0.9972;MQ=89.83;MQ0=0;MQRankSum=-9.238;QD=31.99;ReadPosRankSum=-0.012;VQSLOD=3.8653;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.15:0,51,715	0/0:11,0:11:33.11:0,33,473	0/0:36,0:36:99:0,105,1437	0/0:20,0:20:54.15:0,54,742	0/0:21,0:21:63.20:0,63,886	0/0:21,0:21:63.20:0,63,889	0/0:16,0:16:48.16:0,48,691	1/1:3,29:32:89.87:1062,90,0	1/1:0,13:13:30.09:362,30,0	0/0:34,0:34:99:0,102,1463	0/0:15,0:15:45.14:0,45,632	0/0:27,0:27:81.27:0,81,1163	0/0:32,0:32:93.31:0,93,1339	1/1:2,22:24:65.21:772,65,0	0/0:28,0:28:84.28:0,84,1210	1/1:1,24:25:66.20:785,66,0	1/1:1,27:28:66.20:789,66,0	1/1:1,20:21:57.17:677,57,0	0/0:20,0:20:54.18:0,54,776	0/0:29,0:29:84.28:0,84,1209	0/0:32,0:32:90.30:0,90,1296	0/0:28,0:28:84.28:0,84,1207	0/0:28,0:28:81.27:0,81,1164	0/0:23,0:23:66.22:0,66,950	0/0:36,0:36:99:0,108,1537	1/1:0,33:33:99:1162,99,0	0/0:42,0:42:99:0,126,1812	1/1:0,5:5:15.05:180,15,0
chr10	78454194	.	GTA	G	5166.29	PASS	AB=0.545;AC=13;AF=0.241;AN=54;BaseQRankSum=12.256;DP=672;FS=1.583;HRun=0;HaplotypeScore=81.4182;InbreedingCoeff=0.9002;MQ=85.54;MQ0=3;MQRankSum=-1.622;QD=29.19;ReadPosRankSum=3.956;VQSLOD=6.2388;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,2111	0/0:10,0:10:27.09:0,27,467	0/0:29,0:28:69.21:0,69,1108	0/0:25,0:24:50.64:0,51,851	0/0:21,0:21:57.18:0,57,958	0/0:26,0:26:57.16:0,57,931	0/0:25,0:25:72.20:0,72,1155	1/1:5,24:29:69.17:855,69,0	1/1:5,24:29:72.23:943,72,0	0/0:17,0:17:45.15:0,45,777	0/0:18,0:18:42.06:0,42,690	0/0:29,0:29:72.23:0,72,1218	0/0:25,0:25:66.21:0,66,1113	1/1:1,24:25:60.20:797,60,0	0/0:24,0:24:63.17:0,63,999	1/1:1,20:21:36.12:478,36,0	1/1:2,27:27:66.22:877,66,0	0/1:3,15:18:15.68:403,0,16	0/0:18,0:18:51.17:0,51,871	0/0:24,0:24:53.70:0,54,906	0/0:39,0:39:99:0,111,1892	0/0:18,0:18:48.16:0,48,826	0/0:20,0:20:57.18:0,57,939	0/0:40,0:40:99:0,102,1759	0/0:18,0:18:45.15:0,45,778	1/1:4,22:26:19.79:813,20,0	0/0:23,0:23:66.23:0,66,1134	./.
chr10	78454327	.	GGAGAGAGAGA	G	2510.89	PASS	AB=0.738;AC=14;AF=0.280;AN=50;BaseQRankSum=4.057;DP=543;FS=54.568;HRun=0;HaplotypeScore=148.4088;InbreedingCoeff=0.6224;MQ=60.37;MQ0=12;MQRankSum=-5.836;QD=17.44;ReadPosRankSum=2.931;VQSLOD=0.7087;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:33:42.14:0,42,1370	./.	0/0:40,0:16:3.01:0,3,37	0/0:62,0:22:2.29:0,2,6	0/0:16,0:16:15.03:0,15,476	0/0:11,0:16:18.01:0,18,437	0/0:10,0:11:12.04:0,12,410	0/0:27,0:27:33.08:0,33,1139	0/0:15,0:15:12.04:0,12,351	0/0:17,0:17:25.90:0,26,999	0/0:9,0:9:3.01:0,3,120	1/1:11,12:24:23.66:627,24,0	0/1:11,9:20:86.35:517,0,86	0/0:22,0:21:9.03:0,9,346	0/0:15,0:15:12.51:0,13,519	0/0:22,0:22:12.02:0,12,306	0/0:15,0:15:9.03:0,9,237	0/0:11,0:11:9.03:0,9,305	0/1:8,0:10:20.64:21,0,38	1/1:11,1:17:15.03:204,15,0	./.	1/1:7,5:14:18.06:498,18,0	1/1:7,11:18:21.07:547,21,0	1/1:18,10:28:3.01:90,3,0	./.	0/0:22,0:22:39.13:0,39,1483	1/1:6,1:11:12.91:179,13,0	0/0:17,0:16:26.45:0,26,861
chr10	78454367	.	A	ATC	1774.24	PASS	AB=0.643;AC=7;AF=0.130;AN=54;BaseQRankSum=-4.587;DP=492;FS=9.247;HRun=0;HaplotypeScore=97.7718;InbreedingCoeff=0.0417;MQ=68.95;MQ0=7;MQRankSum=2.145;QD=13.54;ReadPosRankSum=0.669;VQSLOD=3.0910;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:71.48:0,71,920	0/0:3,0:3:6.01:0,6,71	0/0:33,0:19:18.17:0,18,657	0/0:34,0:24:38.11:0,38,714	0/0:18,0:18:32.29:0,32,407	0/0:10,0:10:20.40:0,20,241	0/0:8,0:8:24.05:0,24,325	0/1:11,17:28:49.34:678,0,49	0/1:6,12:18:22.60:52,0,23	0/0:19,0:19:46.70:0,47,663	0/0:15,0:15:36.11:0,36,510	0/0:25,0:24:53.68:0,54,637	0/0:17,0:17:39.03:0,39,465	0/1:17,1:18:3.53:233,0,4	0/0:16,0:16:28.29:0,28,346	./.	0/1:3,12:15:5.46:46,0,5	0/1:2,10:12:6.11:139,0,6	0/0:13,0:11:30.08:0,30,448	0/0:15,0:15:36.05:0,36,448	0/0:10,0:9:21.07:0,21,308	0/0:12,0:12:26.99:0,27,279	0/0:16,0:16:36.05:0,36,420	0/0:21,0:20:23.67:0,24,343	0/0:18,0:18:30.10:0,30,450	0/1:9,14:23:94.50:649,0,94	0/0:16,0:16:42.06:0,42,524	0/1:6,10:17:30.18:107,0,30
chr10	78454651	.	CCT	C	1990.95	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=6.877;DP=505;FS=6.084;HRun=0;HaplotypeScore=94.0889;InbreedingCoeff=0.9437;MQ=61.66;MQ0=7;MQRankSum=-0.915;QD=25.86;ReadPosRankSum=2.443;VQSLOD=4.8032;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:66.20:0,66,1108	0/0:3,0:3:4.70:0,5,91	0/0:54,0:21:11.09:0,11,411	0/0:72,1:34:35.91:0,36,446	0/0:12,0:12:36.12:0,36,628	0/0:19,0:19:51.14:0,51,843	0/0:23,0:22:50.91:0,51,837	0/0:26,0:26:48.16:0,48,789	1/1:2,10:12:26.49:355,26,0	0/0:14,0:14:42.12:0,42,697	0/0:11,0:11:24.03:0,24,397	0/0:13,0:13:37.51:0,38,607	0/0:10,0:10:30.06:0,30,495	1/1:2,12:14:30.06:392,30,0	0/0:14,0:14:36.10:0,36,563	1/1:1,8:9:17.91:204,18,0	1/1:0,13:13:27.09:376,27,0	1/1:2,14:16:17.13:396,17,0	0/0:28,0:26:72.24:0,72,1215	0/0:11,0:10:30.10:0,30,531	0/0:14,0:14:36.12:0,36,573	0/0:8,0:8:24.08:0,24,423	0/0:8,0:8:20.81:0,21,331	0/0:37,0:37:84.22:0,84,1416	0/0:10,0:10:21.07:0,21,333	1/1:1,9:10:27.09:376,27,0	0/0:13,0:13:36.12:0,36,638	1/1:0,3:3:6.02:84,6,0
chr10	78454686	.	CT	C	311.39	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=0.504;DP=449;FS=19.444;HRun=1;HaplotypeScore=124.3188;InbreedingCoeff=0.8502;MQ=64.49;MQ0=4;MQRankSum=0.066;QD=23.95;ReadPosRankSum=-3.139;VQSLOD=1.7875;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:90.62:0,91,1271	0/0:4,0:4:8.96:0,9,106	0/0:23,0:18:46.77:0,47,610	0/0:28,0:17:28.31:0,28,344	0/0:18,0:18:26.69:0,27,402	0/0:20,0:20:47.67:0,48,579	0/0:20,0:19:38.07:0,38,594	1/1:3,10:13:29.89:405,30,0	0/0:15,0:15:33.86:0,34,332	0/0:20,0:20:53.86:0,54,641	0/0:13,0:13:13.45:0,13,245	0/0:17,0:17:26.50:0,27,365	0/0:6,0:6:15.05:0,15,201	0/0:18,0:18:44.33:0,44,561	0/0:21,0:21:39.11:0,39,544	0/0:10,0:10:23.09:0,23,290	0/0:15,0:15:39.11:0,39,546	0/0:17,0:17:42.07:0,42,538	0/0:18,0:17:32.17:0,32,571	0/0:8,0:8:23.67:0,24,324	0/0:7,0:7:9.03:0,9,135	0/0:9,0:9:26.01:0,26,322	0/0:17,0:17:23.92:0,24,259	0/0:31,0:31:47.38:0,47,733	0/0:11,0:10:27.02:0,27,352	0/0:18,0:18:54.08:0,54,720	0/0:16,0:16:19.61:0,20,276	./.
chr10	78454696	.	TACACACAC	T	1632.93	PASS	AB=0.800;AC=10;AF=0.192;AN=52;BaseQRankSum=-0.212;DP=472;FS=0.748;HRun=0;HaplotypeScore=168.7189;InbreedingCoeff=0.6653;MQ=55.54;MQ0=7;MQRankSum=-4.578;QD=17.56;ReadPosRankSum=0.895;VQSLOD=3.0658;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:69.20:0,69,2415	1/1:3,1:4:5.95:94,6,0	0/0:16,0:11:3:0,3,40	./.	0/0:9,10:21:2.27:0,2,9	0/0:13,0:21:21.07:0,21,617	0/0:14,0:18:14.98:0,15,358	0/0:16,0:16:21.07:0,21,486	0/0:15,0:17:27.09:0,27,966	1/1:10,12:22:11.25:509,11,0	0/1:7,8:15:0:0,0,0	0/0:22,0:22:9.20:0,9,524	0/0:10,0:10:12.47:0,12,331	0/0:18,0:19:33.10:0,33,1052	1/1:8,13:20:21.07:527,21,0	0/0:12,0:13:27.02:0,27,679	0/0:14,0:15:12.04:0,12,378	0/0:16,0:16:30.10:0,30,960	0/0:8,0:17:33.11:0,33,987	0/0:9,0:9:20.10:0,20,451	0/0:14,0:14:15.05:0,15,499	0/0:10,0:10:8.96:0,9,187	0/0:21,0:21:11.27:0,11,125	0/0:30,0:30:28.30:0,28,591	1/1:4,9:12:12.04:303,12,0	0/1:17,1:18:29.13:347,0,29	0/0:5,0:18:12.31:0,12,242	./.
chr10	78454730	.	CACACA	C	947.58	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=5.732;DP=495;FS=3.677;HRun=0;HaplotypeScore=145.6093;InbreedingCoeff=0.3243;MQ=52.78;MQ0=7;MQRankSum=-6.974;QD=8.46;ReadPosRankSum=2.250;VQSLOD=2.5996;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:90.26:0,90,2293	0/1:5,0:5:5.22:5,0,127	0/0:17,0:9:27.08:0,27,371	0/0:13,0:10:30.10:0,30,430	0/0:19,0:18:8.90:0,9,122	0/0:21,0:21:42.01:0,42,751	0/0:15,0:13:20.98:0,21,405	0/1:20,0:19:82.73:83,0,323	0/0:16,0:16:35.82:0,36,780	0/1:28,0:28:44.17:44,0,678	0/0:13,0:12:9.03:0,9,122	0/0:17,0:17:12.65:0,13,490	0/0:12,0:12:11.64:0,12,241	0/0:21,0:20:47.87:0,48,1001	0/1:17,0:16:16.85:114,0,17	0/0:11,0:11:29.97:0,30,615	0/0:14,0:14:20.92:0,21,374	0/0:22,0:22:59.39:0,59,958	0/0:21,0:21:63.18:0,63,1267	0/0:9,0:9:23.11:0,23,446	0/0:19,0:19:36.12:0,36,741	0/0:9,0:9:11.80:0,12,202	0/0:23,0:23:23.61:0,24,217	0/0:32,0:31:28.86:0,29,495	0/1:18,0:18:44.45:44,0,289	1/1:13,5:18:53.16:649,53,0	0/0:22,0:22:39.06:0,39,608	1/1:6,0:6:17.87:156,18,0
chr10	78454734	.	CA	C	476.95	PASS	AB=0.855;AC=6;AF=0.107;AN=56;BaseQRankSum=3.957;DP=477;FS=15.206;HRun=1;HaplotypeScore=118.4678;InbreedingCoeff=0.5610;MQ=52.96;MQ0=7;MQRankSum=-3.907;QD=7.82;ReadPosRankSum=0.663;VQSLOD=-0.3278;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:86.50:0,86,1268	0/0:5,0:5:14.26:0,14,170	0/0:17,0:9:27.08:0,27,345	0/0:13,0:10:30.10:0,30,412	0/0:19,0:18:8.63:0,9,121	0/0:22,0:21:39.59:0,40,498	0/0:16,0:14:23.90:0,24,289	0/1:13,9:21:67.96:135,0,68	0/0:16,0:16:35.75:0,36,314	0/0:30,0:30:64.12:0,64,841	0/0:14,0:13:12.03:0,12,148	0/1:17,0:17:6.43:6,0,166	0/0:11,1:12:4.68:0,5,48	0/0:21,0:20:47.75:0,48,476	0/0:17,0:16:19.68:0,20,96	0/0:10,0:10:26.84:0,27,252	0/0:15,0:15:23.87:0,24,224	0/0:22,0:22:47.85:0,48,432	0/0:14,0:14:42.12:0,42,544	0/0:6,0:6:11.62:0,12,126	0/0:17,0:17:36.11:0,36,507	0/0:6,3:9:10.09:0,10,82	0/0:20,2:22:17.98:0,18,83	0/0:26,0:26:16.36:0,16,159	0/0:18,0:18:33.41:0,33,355	1/1:13,3:16:37.10:310,37,0	0/0:21,0:21:44.16:0,44,547	1/1:4,2:6:17.87:156,18,0
chr10	78454737	.	AC	A	941.53	PASS	AB=0.898;AC=12;AF=0.214;AN=56;BaseQRankSum=5.238;DP=471;FS=8.763;HRun=1;HaplotypeScore=114.7137;InbreedingCoeff=0.6954;MQ=53.98;MQ0=6;MQRankSum=-4.802;QD=8.19;ReadPosRankSum=0.858;VQSLOD=0.4912;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:63.19:0,63,1196	0/0:5,0:5:11.93:0,12,187	0/0:17,0:9:27.08:0,27,394	0/0:14,0:11:33.10:0,33,459	0/0:19,0:18:8.62:0,9,140	0/0:22,0:21:42.13:0,42,631	0/0:16,0:14:26.46:0,26,418	1/1:12,9:20:26.92:252,27,0	0/0:15,0:15:36.02:0,36,353	0/0:29,0:29:76.78:0,77,1059	0/0:14,0:13:12.03:0,12,187	1/1:15,0:15:5.19:36,5,0	1/1:10,1:11:9.32:49,9,0	0/0:20,0:19:44.96:0,45,445	0/0:15,0:15:19.10:0,19,158	0/0:10,0:10:27.03:0,27,295	0/0:15,0:15:24.03:0,24,267	0/1:20,2:22:37.60:111,0,38	0/0:15,0:15:45.09:0,45,651	0/0:7,0:7:17.63:0,18,218	0/0:17,0:17:39.10:0,39,586	0/0:7,3:10:2.26:0,2,9	0/1:19,3:22:2.35:2,0,36	0/0:23,0:23:3.20:0,3,43	0/0:19,0:19:36.02:0,36,487	1/1:7,11:18:27:494,27,0	0/0:22,0:22:53.20:0,53,768	1/1:4,2:6:17.91:164,18,0
chr10	78454738	.	C	CACACACTA	3106.16	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=4.906;DP=480;FS=1.604;HRun=0;HaplotypeScore=165.6184;InbreedingCoeff=0.6142;MQ=53.96;MQ0=6;MQRankSum=-7.011;QD=18.27;ReadPosRankSum=-1.617;VQSLOD=3.0544;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:81.73:0,82,2006	0/0:5,0:5:15.02:0,15,352	0/0:17,0:9:27.01:0,27,656	0/0:14,0:11:32.69:0,33,668	0/0:20,0:19:8.71:0,9,260	0/0:19,0:19:43.67:0,44,907	0/0:17,0:15:26.71:0,27,597	1/1:24,0:23:26.14:592,26,0	0/1:14,0:14:37.77:38,0,195	0/0:29,0:29:77.19:0,77,2090	0/0:14,0:13:11.77:0,12,324	1/1:8,4:15:29.98:949,30,0	1/1:2,1:12:14.82:252,15,0	0/1:21,0:20:30.19:30,0,299	0/0:15,0:15:22.28:0,22,522	0/0:10,0:10:2.78:0,3,162	0/0:15,0:15:2.52:0,3,204	0/0:23,0:23:0.16:0,0,407	0/0:15,0:15:37.18:0,37,948	0/0:6,0:6:15.04:0,15,259	0/0:17,0:17:36.07:0,36,777	1/1:3,6:10:8.99:289,9,0	1/1:8,11:23:19.87:188,20,0	1/1:6,13:26:8.95:250,9,0	0/0:18,0:18:39.09:0,39,980	0/1:19,0:19:99:384,0,125	0/0:22,0:22:28.70:0,29,1035	1/1:6,0:6:18.06:325,18,0
chr10	78455565	.	T	TA	3165.65	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-12.233;DP=643;FS=3.703;HRun=7;HaplotypeScore=60.3930;InbreedingCoeff=0.9975;MQ=79.75;MQ0=0;MQRankSum=-1.220;QD=29.31;ReadPosRankSum=0.390;VQSLOD=4.3186;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.09:0,84,798	0/0:8,0:8:18.03:0,18,174	0/0:17,0:18:37.46:0,37,332	0/0:14,0:14:32.48:0,32,285	0/0:37,0:37:99:0,99,943	0/0:27,0:27:75.11:0,75,723	0/0:26,0:26:63.09:0,63,608	0/0:29,0:29:75.11:0,75,724	0/0:16,0:16:42.05:0,42,399	0/0:24,0:24:63.09:0,63,604	0/0:18,0:18:54.08:0,54,516	0/0:25,0:25:69.10:0,69,661	0/0:23,0:23:66.10:0,66,637	0/0:21,0:21:57.09:0,57,550	0/0:30,0:30:84.11:0,84,800	0/0:21,0:21:60.09:0,60,579	0/0:33,0:33:90.14:0,90,869	0/0:21,0:21:51.06:0,51,486	1/1:1,24:25:72.20:855,72,0	1/1:2,27:29:52.27:913,52,0	1/1:1,20:21:48.15:580,48,0	0/0:22,0:22:51.06:0,51,488	0/0:19,0:19:51.08:0,51,493	0/0:18,0:18:51.05:0,51,485	0/0:24,0:24:69.05:0,69,651	0/0:18,0:18:51.08:0,51,493	1/1:2,31:33:81.25:978,81,0	0/0:11,0:11:33.05:0,33,319
chr10	78457876	.	A	AACACACAC	1145.60	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.948;DP=861;FS=0.000;HRun=0;HaplotypeScore=243.1280;InbreedingCoeff=0.9925;MQ=69.89;MQ0=4;MQRankSum=-4.582;QD=26.04;ReadPosRankSum=-2.620;VQSLOD=2.5144;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,135,3195	0/0:10,0:10:30.10:0,30,757	0/0:36,0:21:35.09:0,35,750	0/0:46,0:37:71.27:0,71,1317	0/0:28,0:28:78.24:0,78,1901	0/0:22,0:22:59.97:0,60,1288	0/0:34,0:34:93.25:0,93,2146	0/0:32,0:32:74.36:0,74,1504	0/0:42,0:42:99:0,120,2676	0/0:36,0:36:93.31:0,93,2328	0/0:15,0:15:42.13:0,42,1044	0/0:38,0:38:84.25:0,84,1985	0/0:38,0:38:99:0,105,2460	0/0:30,0:30:84.27:0,84,2060	0/0:30,0:30:81.19:0,81,1827	0/0:36,0:36:90.26:0,90,2188	1/1:13,0:23:21:370,21,0	1/1:7,12:20:27.06:896,27,0	0/0:23,0:23:42:0,42,662	0/0:33,0:33:81.17:0,81,1766	0/0:44,0:43:99:0,114,2498	0/0:26,0:26:66.20:0,66,1561	0/0:25,0:25:63.21:0,63,1562	0/0:44,0:44:99:0,111,2709	0/0:27,0:26:75.16:0,75,1799	0/0:38,0:38:96.19:0,96,2348	0/0:27,0:27:72.09:0,72,1728	0/0:7,0:7:17.73:0,18,289
chr10	78459411	.	GAAA	G	5139.03	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=6.024;DP=569;FS=4.515;HRun=12;HaplotypeScore=95.4099;InbreedingCoeff=0.9873;MQ=75.88;MQ0=0;MQRankSum=-2.262;QD=31.72;ReadPosRankSum=4.136;VQSLOD=4.5893;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:27:61.45:0,61,1186	1/1:1,5:6:15.04:190,15,0	0/0:19,0:19:11.86:0,12,307	0/0:22,0:15:15.02:0,15,210	1/1:2,23:25:69.21:872,69,0	0/0:15,0:18:48.15:0,48,860	0/0:18,0:19:51.16:0,51,946	0/0:30,0:35:78.20:0,78,1302	0/0:4,0:21:33.11:0,33,474	1/1:2,19:21:54.12:667,54,0	1/1:3,15:18:36.07:455,36,0	0/0:14,0:19:54.14:0,54,927	0/0:22,0:22:51.17:0,51,1002	0/0:5,0:32:57.18:0,57,787	0/0:3,0:14:36.12:0,36,512	0/0:3,0:13:30.10:0,30,428	0/0:26,0:27:78.19:0,78,1446	0/0:15,0:16:36.12:0,36,664	1/1:1,13:14:39.12:492,39,0	1/1:1,18:19:51.13:644,51,0	1/1:2,13:15:30.08:379,30,0	0/0:21,0:24:69.19:0,69,1258	0/0:24,0:24:63.18:0,63,1142	0/0:21,0:23:60.21:0,60,1150	1/1:0,20:20:51.16:644,51,0	0/0:19,0:24:69.19:0,69,1203	1/1:2,22:24:63.19:796,63,0	0/0:4,0:5:15.03:0,15,235
chr10	78460986	.	G	GCACACACACA	3713.82	PASS	AB=0.767;AC=28;AF=0.538;AN=52;BaseQRankSum=0.236;DP=639;FS=10.854;HRun=0;HaplotypeScore=201.9506;InbreedingCoeff=0.2639;MQ=70.21;MQ0=13;MQRankSum=-5.474;QD=9.90;ReadPosRankSum=-4.332;VQSLOD=-0.0047;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:20.65:0,21,738	0/0:6,0:10:6.97:0,7,122	./.	./.	0/1:12,0:21:10.98:11,0,77	0/0:18,0:22:20.07:0,20,514	0/0:19,0:20:16.49:0,16,485	0/1:25,0:25:41.62:47,0,42	1/1:13,6:23:15.05:486,15,0	0/1:14,0:24:99:175,0,190	0/1:10,0:17:19.31:19,0,190	1/1:19,8:29:17.99:532,18,0	1/1:16,7:25:18.06:773,18,0	1/1:17,0:17:15.02:357,15,0	1/1:10,1:21:6.02:141,6,0	0/0:10,0:23:3.72:0,4,257	0/0:33,0:34:14.64:0,15,980	0/1:13,0:18:31.51:32,0,382	1/1:12,0:14:9.03:156,9,0	1/1:9,0:14:9.03:141,9,0	1/1:30,0:29:18.81:338,19,0	0/0:11,0:26:0.47:0,0,1	1/1:21,0:20:2.90:50,3,0	1/1:26,0:26:10.18:170,10,0	0/0:15,0:28:18:0,18,241	0/1:12,0:16:34.55:191,0,35	0/1:7,0:20:83.29:89,0,83	0/1:5,0:11:4.89:5,0,83
chr10	78462821	.	G	GT	7770.11	PASS	AB=0.581;AC=29;AF=0.518;AN=56;BaseQRankSum=-8.866;DP=604;FS=5.627;HRun=9;HaplotypeScore=61.7529;InbreedingCoeff=0.8970;MQ=80.02;MQ0=0;MQRankSum=-1.442;QD=23.69;ReadPosRankSum=1.109;VQSLOD=5.8348;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:32.95:0,33,278	1/1:0,5:5:15.04:166,15,0	0/0:23,0:23:5.34:0,5,328	0/0:17,0:17:17.98:0,18,211	1/1:5,17:22:25.05:492,25,0	0/0:32,0:32:80.97:0,81,703	0/0:20,0:20:53.94:0,54,457	0/0:28,0:28:68.94:0,69,591	0/0:21,0:22:46.99:0,47,393	1/1:2,23:26:65.98:692,66,0	1/1:4,21:25:21.10:619,21,0	1/1:3,16:19:15.71:375,16,0	1/1:2,14:16:39.11:431,39,0	0/0:20,0:20:53.98:0,54,469	0/0:28,0:28:77.98:0,78,677	1/1:3,16:19:45.07:484,45,0	0/0:21,0:21:50.98:0,51,443	0/0:14,0:14:26.99:0,27,234	1/1:3,17:20:51.11:552,51,0	1/1:3,30:33:55.09:811,55,0	1/1:2,12:14:4.03:273,4,0	0/1:5,13:18:5.17:326,0,5	1/1:4,31:35:64.19:937,64,0	1/1:2,20:22:51.14:564,51,0	1/1:1,26:27:63:678,63,0	0/0:30,1:31:59.76:0,60,740	1/1:8,18:26:13.05:372,13,0	0/0:6,0:6:15:0,15,130
chr10	78463141	.	CA	C	9065.50	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=17.873;DP=670;FS=7.119;HRun=8;HaplotypeScore=66.0440;InbreedingCoeff=0.9845;MQ=71.62;MQ0=0;MQRankSum=-0.545;QD=25.83;ReadPosRankSum=3.862;VQSLOD=5.5926;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,1579	1/1:1,10:11:27.04:261,27,0	0/0:10,0:9:6.80:0,7,231	0/0:13,0:13:21.03:0,21,224	1/1:0,29:29:84.14:811,84,0	0/0:21,0:21:63.19:0,63,761	0/0:17,0:17:51.15:0,51,606	0/0:34,0:34:93.26:0,93,1095	0/0:20,0:20:60.17:0,60,712	1/1:2,31:33:93.15:898,93,0	1/1:4,19:23:54.08:521,54,0	1/1:0,18:18:48.08:464,48,0	1/1:1,24:25:60.10:579,60,0	0/0:34,0:34:99:0,99,1165	0/0:27,0:27:81.25:0,81,978	1/1:3,18:21:14.84:427,15,0	0/0:31,0:31:87.27:0,87,1051	0/0:21,0:21:63.19:0,63,759	1/1:2,13:15:39.06:376,39,0	1/1:1,29:31:89.18:846,89,0	1/1:2,26:28:75.12:724,75,0	1/1:1,17:18:48.07:463,48,0	1/1:0,25:25:75.12:724,75,0	1/1:1,30:31:87.14:840,87,0	1/1:0,22:22:60.10:579,60,0	0/0:32,1:33:52.26:0,52,913	1/1:2,19:21:57.09:550,57,0	0/0:11,0:11:33.10:0,33,398
chr10	78463351	.	TA	T	11229.07	PASS	AB=0.920;AC=31;AF=0.554;AN=56;BaseQRankSum=16.857;DP=658;FS=2.000;HRun=2;HaplotypeScore=75.8994;InbreedingCoeff=0.9115;MQ=91.41;MQ0=0;MQRankSum=-3.001;QD=32.83;ReadPosRankSum=3.245;VQSLOD=5.0304;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.29:0,87,1301	1/1:0,13:13:36.12:467,36,0	0/0:25,0:25:60.47:0,60,901	0/0:27,0:27:75.13:0,75,948	1/1:1,14:15:42.05:523,42,0	0/0:22,0:22:63.20:0,63,922	0/0:34,0:34:99:0,99,1421	0/0:37,0:37:99:0,105,1502	0/0:25,0:25:75.24:0,75,1103	1/1:0,23:23:69.22:884,69,0	1/1:0,18:18:54.18:700,54,0	1/1:0,24:24:66.15:836,66,0	1/1:1,21:22:57.18:740,57,0	0/0:30,0:30:90.28:0,90,1301	0/0:34,0:34:99:0,102,1507	1/1:2,29:31:3.38:1039,3,0	0/0:27,0:27:75.25:0,75,1124	0/0:21,0:21:63.20:0,63,923	1/1:0,9:9:27.09:351,27,0	1/1:0,18:18:51.06:623,51,0	1/1:0,32:32:81.26:1051,81,0	1/1:0,21:21:57.11:739,57,0	1/1:0,17:17:45.15:582,45,0	1/1:0,24:24:72.23:934,72,0	1/1:0,25:25:63.20:818,63,0	0/1:21,2:23:8.69:9,0,875	1/1:0,27:27:72.23:934,72,0	0/0:5,0:5:15.05:0,15,221
chr10	78463602	.	AT	A	9560.88	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=15.482;DP=649;FS=0.950;HRun=6;HaplotypeScore=85.1921;InbreedingCoeff=0.9955;MQ=81.08;MQ0=0;MQRankSum=-7.530;QD=28.37;ReadPosRankSum=2.081;VQSLOD=5.4194;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.20:0,60,789	1/1:0,15:15:39.10:418,39,0	0/0:19,0:19:47.59:0,48,572	0/0:19,0:19:39.64:0,40,472	1/1:1,23:23:54.13:580,54,0	0/0:35,0:35:99:0,99,1288	0/0:22,0:22:54.18:0,54,711	0/0:31,0:31:81.26:0,81,1064	0/0:27,0:27:78.24:0,78,1011	1/1:1,30:31:93.21:989,93,0	1/1:2,19:21:57.14:612,57,0	1/1:2,19:21:60.15:644,60,0	1/1:2,24:26:72.18:773,72,0	0/0:26,0:26:78.23:0,78,993	0/0:23,0:23:69.22:0,69,908	1/1:2,15:17:51.11:540,51,0	0/0:26,0:26:72.23:0,72,946	0/0:22,0:22:57.17:0,57,730	1/1:3,16:19:48.12:515,48,0	1/1:2,26:28:69.17:741,69,0	1/1:0,16:16:42.11:451,42,0	1/1:1,18:19:57.12:603,57,0	1/1:4,20:24:60.15:645,60,0	1/1:4,7:11:24:236,24,0	1/1:5,24:29:66.16:709,66,0	0/0:35,0:35:99:0,102,1342	1/1:7,29:36:99:1103,105,0	0/0:4,0:4:12.04:0,12,158
chr10	78463670	.	CTT	C	12692.25	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=18.079;DP=709;FS=6.766;HRun=5;HaplotypeScore=117.3905;InbreedingCoeff=0.9990;MQ=82.42;MQ0=0;MQRankSum=-6.057;QD=36.37;ReadPosRankSum=1.999;VQSLOD=3.6903;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.31:0,90,1649	1/1:3,7:10:27.09:376,27,0	0/0:21,0:21:60.19:0,60,1037	0/0:22,0:22:60.62:0,61,987	1/1:0,20:20:48.16:671,48,0	0/0:27,0:27:81.27:0,81,1444	0/0:34,0:34:99:0,99,1752	0/0:34,0:34:96.33:0,96,1750	0/0:31,0:31:93.32:0,93,1699	1/1:6,21:27:72.23:993,72,0	1/1:3,15:18:39.13:545,39,0	1/1:1,27:28:26.25:1036,26,0	1/1:1,32:33:87.29:1210,87,0	0/0:29,0:29:84.29:0,84,1540	0/0:31,0:31:90.31:0,90,1644	1/1:3,26:29:20.23:952,20,0	0/0:32,0:32:90.31:0,90,1650	0/0:27,0:27:81.28:0,81,1477	1/1:2,22:24:66.19:904,66,0	1/1:4,12:16:39.12:528,39,0	1/1:3,23:26:63.21:881,63,0	1/1:1,19:20:57.19:796,57,0	1/1:1,25:26:71.99:1007,72,0	1/1:0,18:18:48.16:671,48,0	1/1:1,26:27:75.24:1033,75,0	0/0:30,0:30:90.30:0,90,1618	1/1:0,27:27:78.26:1090,78,0	0/0:12,0:12:33.07:0,33,569
chr10	78463848	.	C	CTCTG	1360.12	PASS	AB=1.000;AC=8;AF=0.154;AN=52;BaseQRankSum=-4.874;DP=727;FS=0.000;HRun=0;HaplotypeScore=191.3869;InbreedingCoeff=0.3193;MQ=63.60;MQ0=4;MQRankSum=0.794;QD=7.20;ReadPosRankSum=-4.777;VQSLOD=0.8839;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:78.03:0,78,1025	0/0:9,0:9:12.39:0,12,76	./.	./.	0/0:32,0:31:28.28:0,28,200	0/0:19,0:19:24:0,24,262	0/1:38,0:36:99:240,0,250	0/0:34,0:33:11.86:0,12,79	0/1:29,0:29:26.97:177,0,27	0/0:31,0:31:39.37:0,39,305	0/0:19,0:19:25.82:0,26,206	0/0:29,0:29:32.91:0,33,272	0/0:25,0:25:30.11:0,30,217	0/1:31,0:31:99:204,0,160	0/1:32,0:32:99:117,0,165	0/0:26,0:26:36.91:0,37,214	1/1:14,26:40:33.09:731,33,0	1/1:19,0:18:5.27:29,5,0	0/0:23,0:22:11.87:0,12,94	0/0:14,0:14:18.16:0,18,127	0/0:47,0:47:27.61:0,28,231	0/0:19,0:19:17.92:0,18,141	0/0:23,0:23:33.78:0,34,258	0/0:27,0:27:11.53:0,12,97	0/0:10,0:10:9.26:0,9,81	0/0:27,0:27:36.10:0,36,485	0/0:18,0:18:20.16:0,20,130	0/0:7,0:6:9:0,9,95
chr10	78463878	.	CTG	C	852.04	PASS	AB=0.915;AC=10;AF=0.179;AN=56;BaseQRankSum=7.167;DP=721;FS=0.468;HRun=0;HaplotypeScore=198.9385;InbreedingCoeff=-0.0311;MQ=52.07;MQ0=15;MQRankSum=-6.645;QD=4.35;ReadPosRankSum=0.035;VQSLOD=3.0015;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:54:99:0,131,2240	0/1:7,0:7:20.04:20,0,64	0/0:18,1:12:0.73:0,1,144	0/0:19,0:5:2.74:0,3,12	0/0:29,0:28:40.30:0,40,267	0/0:19,0:19:45.15:0,45,789	0/0:40,0:38:89.61:0,90,1554	0/0:44,0:40:81.56:0,82,831	0/0:31,0:31:30.09:0,30,505	0/1:25,1:26:15.91:16,0,295	0/0:16,0:15:31.49:0,31,224	0/1:21,7:28:99:242,0,139	0/1:21,5:28:99:189,0,219	0/0:27,0:27:42.12:0,42,737	0/0:35,0:34:42.12:0,42,736	0/0:26,0:26:4.95:0,5,266	0/0:41,0:41:66.22:0,66,958	0/0:24,0:23:17.41:0,17,219	0/1:27,0:21:66.86:67,0,351	0/0:19,1:19:10.90:0,11,85	0/0:31,0:30:17.23:0,17,162	0/1:16,1:17:19.71:123,0,20	1/1:17,3:20:15.85:232,16,0	0/1:20,5:26:28.39:77,0,28	0/0:15,0:15:6.05:0,6,71	0/0:28,0:27:77.17:0,77,887	0/1:17,0:17:32.77:33,0,116	0/0:5,0:5:12.01:0,12,161
chr10	78463880	.	G	GTCTCTCTCTCTC	1464.59	PASS	AB=0.973;AC=22;AF=0.393;AN=56;BaseQRankSum=0.465;DP=711;FS=18.653;HRun=0;HaplotypeScore=304.8815;InbreedingCoeff=-0.3351;MQ=51.88;MQ0=15;MQRankSum=-1.462;QD=3.28;ReadPosRankSum=-3.160;VQSLOD=0.4267;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:53:99:0,127,3004	0/1:7,0:7:19.54:82,0,20	0/1:17,0:10:12:12,0,99	0/0:21,0:5:3:0,3,26	0/1:28,0:27:76.48:76,0,168	0/0:17,0:17:45.08:0,45,884	0/0:40,0:38:89.69:0,90,1571	0/1:44,0:40:96.75:97,0,691	0/0:30,0:30:21.04:0,21,269	0/1:26,0:26:92.54:93,0,258	0/1:15,0:15:34.05:57,0,34	0/1:27,0:27:60.36:60,0,350	0/1:28,0:28:99:141,0,387	0/0:26,0:26:39.38:0,39,533	0/0:34,0:33:36.82:0,37,485	0/1:25,0:25:99:111,0,237	0/0:41,0:41:62.87:0,63,976	0/1:6,15:24:15.57:140,0,16	0/1:26,0:20:47.34:47,0,188	1/1:20,0:19:14.68:98,15,0	1/1:30,0:29:29.72:257,30,0	0/1:18,0:18:54.32:120,0,54	0/1:20,0:20:35.11:113,0,35	0/1:24,0:24:52.05:52,0,61	0/1:15,0:15:11.77:12,0,70	0/1:28,0:27:20.39:20,0,934	0/1:17,0:17:40.92:41,0,89	0/1:6,0:6:1.12:1,0,115
chr10	78463882	.	CTG	C	4670.11	PASS	AB=0.921;AC=29;AF=0.518;AN=56;BaseQRankSum=3.017;DP=704;FS=5.673;HRun=0;HaplotypeScore=184.7546;InbreedingCoeff=0.3225;MQ=51.73;MQ0=16;MQRankSum=-3.472;QD=11.09;ReadPosRankSum=-1.265;VQSLOD=4.0781;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:57:99:0,99,1734	1/1:6,1:7:20.95:200,21,0	0/0:20,0:9:5.80:0,6,82	0/0:22,0:5:5.98:0,6,55	1/1:21,7:27:2.80:320,3,0	0/0:17,0:17:45.07:0,45,587	0/0:37,0:35:54.44:0,54,979	0/1:46,1:43:99:309,0,181	0/0:29,0:29:21.01:0,21,203	1/1:15,7:22:63.03:706,63,0	1/1:12,2:13:25.63:235,26,0	0/1:21,7:28:70.87:242,0,71	0/1:21,5:26:99:173,0,187	0/0:27,0:27:38.98:0,39,356	0/0:31,2:32:29.30:0,29,275	1/1:19,6:25:28.52:499,29,0	0/0:40,0:40:63.15:0,63,777	0/1:19,0:18:4.84:5,0,26	0/1:23,3:20:11.27:354,0,11	1/1:12,8:19:21.56:210,22,0	1/1:27,3:29:44.12:437,44,0	0/1:17,1:18:5.89:129,0,6	1/1:18,3:21:25.10:243,25,0	0/1:19,5:24:14.03:77,0,14	1/1:12,3:15:3.97:86,4,0	0/1:29,0:28:85.68:86,0,274	1/1:11,4:15:35.91:345,36,0	0/1:7,0:7:14.66:15,0,37
chr10	78463884	.	G	GTCTC	2898.96	PASS	AB=0.927;AC=33;AF=0.589;AN=56;BaseQRankSum=2.691;DP=716;FS=21.179;HRun=0;HaplotypeScore=221.9658;InbreedingCoeff=0.0726;MQ=53.76;MQ0=17;MQRankSum=-1.819;QD=5.24;ReadPosRankSum=-0.189;VQSLOD=0.7451;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:56:99:0,108,1209	1/1:7,0:7:11.67:70,12,0	0/0:24,0:12:2.74:0,3,81	0/0:23,0:4:5.98:0,6,50	1/1:29,0:28:14.79:86,15,0	0/0:17,0:17:29.88:0,30,312	0/1:37,0:37:31.81:32,0,435	1/1:46,0:42:73.07:527,73,0	1/1:3,24:29:14.79:307,15,0	1/1:25,0:25:8.31:182,8,0	0/1:16,0:15:11.93:12,0,15	0/1:28,0:28:16.59:36,0,17	0/1:25,0:25:20.31:20,0,44	0/1:10,19:30:4.45:347,0,4	0/1:11,21:34:4.87:228,0,5	1/1:23,0:24:31.53:161,32,0	0/1:39,0:39:99:410,0,140	1/1:19,0:18:5.79:37,6,0	1/1:26,0:20:13.15:165,13,0	1/1:21,0:20:2.97:8,3,0	0/1:27,0:26:0.59:3,0,1	0/0:19,0:19:0.31:0,0,3	1/1:20,0:20:0.76:24,1,0	0/0:23,0:23:1.13:0,1,9	0/1:15,0:15:13.24:22,0,13	0/1:29,0:28:99:263,0,109	1/1:18,0:18:13.43:62,13,0	0/1:6,0:6:15.37:59,0,15
chr10	78463902	.	C	CTG	2674.65	PASS	AB=0.931;AC=24;AF=0.429;AN=56;BaseQRankSum=11.294;DP=749;FS=1.309;HRun=0;HaplotypeScore=232.4361;InbreedingCoeff=0.3791;MQ=56.12;MQ0=15;MQRankSum=-4.621;QD=7.29;ReadPosRankSum=1.740;VQSLOD=2.8582;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:99:0,126,1683	1/1:4,3:7:9.25:218,9,0	0/0:39,0:19:22.86:0,23,272	0/0:53,0:18:16.20:0,16,230	1/1:19,9:27:3.72:236,4,0	0/0:20,0:20:51.02:0,51,624	0/0:37,0:35:73.54:0,74,895	0/0:48,0:45:39.70:0,40,892	0/1:33,0:33:5.21:5,0,124	1/1:28,4:32:30.02:593,30,0	0/1:9,3:11:10.54:54,0,11	0/1:23,0:23:25.12:68,0,25	0/1:30,0:30:32.44:32,0,174	0/0:28,0:28:14.34:0,14,160	0/1:33,0:32:23.88:24,0,141	1/1:17,9:26:27.57:593,28,0	0/0:40,0:40:69.39:0,69,657	0/0:15,0:14:3.69:0,4,82	0/1:13,5:18:60.12:382,0,60	1/1:21,3:23:12.43:100,12,0	1/1:15,8:22:8.58:113,9,0	0/0:13,1:14:0.29:0,0,15	0/1:13,0:14:2.61:3,0,17	0/1:26,2:28:0.32:0,0,13	1/1:10,7:17:6.68:117,7,0	0/0:30,0:30:87.14:0,87,1059	1/1:17,2:18:39.44:321,39,0	0/0:8,0:8:17.96:0,18,175
chr10	78463930	.	GTC	G	4098.46	PASS	AB=0.740;AC=25;AF=0.446;AN=56;BaseQRankSum=15.471;DP=702;FS=9.648;HRun=0;HaplotypeScore=213.2812;InbreedingCoeff=0.6455;MQ=58.02;MQ0=9;MQRankSum=-11.807;QD=13.18;ReadPosRankSum=0.487;VQSLOD=2.4509;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:52:99:0,142,2461	0/1:3,4:7:1.88:95,0,2	0/0:31,1:23:56.80:0,57,653	0/0:45,0:27:40:0,40,592	0/1:12,6:18:8.84:214,0,9	0/0:29,0:29:84.22:0,84,1407	0/0:38,0:38:99:0,108,1577	0/0:26,0:26:72.19:0,72,1056	0/0:26,0:26:39.10:0,39,665	0/1:15,9:24:12.98:222,0,13	1/1:6,4:10:13.15:166,13,0	1/1:15,6:21:6.76:315,7,0	1/1:19,6:25:9.67:207,10,0	0/0:25,0:25:36.07:0,36,562	0/0:26,0:25:48.09:0,48,693	0/1:18,10:28:11.13:442,0,11	0/0:39,0:39:84.35:0,84,1408	0/0:15,0:15:24.02:0,24,373	0/1:19,4:22:31.86:245,0,32	1/1:13,10:22:47.34:462,47,0	1/1:26,2:27:20.85:205,21,0	1/1:7,4:11:21.02:222,21,0	1/1:12,3:14:12.50:188,13,0	1/1:22,9:31:29.79:304,30,0	1/1:12,5:17:8.85:225,9,0	0/0:29,0:29:87.28:0,87,1424	1/1:16,14:29:41.24:587,41,0	0/0:6,0:6:14.55:0,15,263
chr10	78463967	.	TC	T	8110.95	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=19.120;DP=677;FS=20.648;HRun=2;HaplotypeScore=155.8789;InbreedingCoeff=0.9808;MQ=67.25;MQ0=1;MQRankSum=-7.597;QD=27.49;ReadPosRankSum=0.056;VQSLOD=2.8033;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,2056	1/1:0,6:6:15.05:194,15,0	0/0:27,0:27:72.04:0,72,935	0/0:17,0:17:16.15:0,16,533	1/1:1,9:10:12.04:155,12,0	0/0:40,0:40:99:0,117,1688	0/0:44,0:44:99:0,129,1886	0/0:26,0:26:78.21:0,78,1112	0/0:30,0:30:87.25:0,87,1225	1/1:3,19:22:60.59:687,61,0	1/1:1,11:12:24.08:311,24,0	1/1:2,22:24:61.44:774,61,0	1/1:5,15:20:44.86:500,45,0	0/0:19,0:19:54.18:0,54,808	0/0:35,0:34:84.27:0,84,1238	1/1:3,26:29:72.23:930,72,0	0/0:48,0:48:99:0,141,2051	0/0:18,0:17:42.14:0,42,624	1/1:2,23:25:69.01:850,69,0	1/1:3,20:23:48.11:590,48,0	1/1:1,27:28:57.05:713,57,0	1/1:2,11:12:14.80:192,15,0	1/1:0,11:10:21.07:272,21,0	1/1:0,25:25:42.09:523,42,0	1/1:0,15:15:39.13:503,39,0	0/0:25,1:25:39.37:0,39,989	1/1:4,28:32:77.65:917,78,0	0/0:4,0:4:9.03:0,9,134
chr10	78464240	.	G	GGGA	298.92	PASS	AB=0.904;AC=9;AF=0.161;AN=56;BaseQRankSum=5.824;DP=245;FS=8.916;HRun=0;HaplotypeScore=53.6070;InbreedingCoeff=-0.0556;MQ=55.93;MQ0=0;MQRankSum=-4.115;QD=4.40;ReadPosRankSum=-0.866;VQSLOD=0.0988;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:17:8.18:0,8,266	0/0:2,0:2:6.02:0,6,68	0/0:14,0:10:10.18:0,10,176	0/0:13,0:10:18.31:0,18,263	0/0:7,0:7:9.03:0,9,139	0/0:9,0:9:17.99:0,18,271	0/1:16,1:17:46.70:47,0,266	0/0:13,1:13:11.14:0,11,453	0/1:4,1:5:35.80:36,0,93	0/1:10,1:12:85.68:86,0,391	0/0:1,0:1:3.01:0,3,53	0/1:6,0:7:41.82:42,0,47	0/1:6,3:9:93.41:93,0,189	1/1:2,0:5:8.96:90,9,0	0/1:6,0:6:11.82:12,0,132	0/0:9,1:10:24.08:0,24,363	0/0:8,0:10:11.81:0,12,191	0/1:6,0:7:31.21:31,0,228	0/0:4,1:5:12.04:0,12,208	0/0:6,0:6:3.01:0,3,53	0/0:8,0:8:12.04:0,12,189	0/0:9,0:8:12.04:0,12,163	0/0:6,0:5:6.02:0,6,103	0/0:13,0:14:14.56:0,15,258	0/0:4,0:4:5.88:0,6,89	0/0:13,1:13:8.10:0,8,550	0/0:10,0:10:18.03:0,18,265	0/0:1,0:1:3.01:0,3,53
chr10	78464668	.	G	GA	161.93	PASS	AB=0.750;AC=11;AF=0.688;AN=16;BaseQRankSum=-1.090;DP=40;FS=10.414;HRun=0;HaplotypeScore=23.2692;MQ=60.08;MQ0=17;MQRankSum=-0.623;QD=9.00;ReadPosRankSum=-0.778;VQSLOD=1.6881;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:1,0:1:0.47:0,0,1	./.	0/0:1,0:1:0:0,0,0	1/1:0,2:2:0.47:1,0,0	./.	./.	./.	./.	1/1:1,1:2:5.88:51,6,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/1:2,1:2:0.23:1,0,0	./.	./.	1/1:2,2:4:0.92:12,1,0	./.	1/1:1,5:6:17.76:142,18,0	./.	./.	1/1:1,0:1:3:25,3,0
chr10	78465558	.	C	CT	9628.64	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=5.595;DP=594;FS=6.095;HRun=7;HaplotypeScore=103.9151;InbreedingCoeff=0.8873;MQ=83.86;MQ0=0;MQRankSum=-4.006;QD=20.23;ReadPosRankSum=3.237;VQSLOD=3.9190;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.14:0,90,869	1/1:3,0:11:20.22:108,20,0	0/0:20,0:20:53.94:0,54,501	0/1:17,0:17:17.68:18,0,223	1/1:1,0:24:63.50:335,64,0	0/0:21,0:21:63.10:0,63,608	0/0:21,0:21:57.09:0,57,550	1/1:7,14:21:42.09:472,42,0	1/1:2,13:15:33.10:399,33,0	1/1:4,1:28:63.34:331,63,0	1/1:4,0:17:37.47:198,37,0	1/1:2,19:21:54.17:652,54,0	1/1:1,18:19:25.53:587,26,0	1/1:2,18:20:45.14:544,45,0	1/1:1,23:24:59.93:725,60,0	1/1:2,1:18:37.81:191,38,0	0/0:24,0:24:66.09:0,66,631	1/1:0,12:12:36.11:435,36,0	1/1:7,1:24:51.81:283,52,0	1/1:2,0:22:57.57:296,58,0	1/1:2,0:14:31.81:171,32,0	1/1:1,18:19:51.16:616,51,0	1/1:3,23:26:69.17:815,69,0	1/1:1,14:15:36.11:435,36,0	1/1:2,1:27:69.14:359,69,0	1/1:10,25:36:57.96:924,58,0	1/1:3,1:32:66.40:373,66,0	1/1:2,12:14:30.09:362,30,0
chr10	78465922	.	T	TG	12043.08	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-13.335;DP=711;FS=0.290;HRun=5;HaplotypeScore=67.6657;InbreedingCoeff=0.9997;MQ=86.91;MQ0=0;MQRankSum=-2.968;QD=33.09;ReadPosRankSum=3.412;VQSLOD=5.2569;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,150,1594	1/1:0,10:10:26.83:355,27,0	0/0:26,0:26:56.77:0,57,642	0/0:23,0:23:61.94:0,62,631	1/1:1,26:27:75.24:979,75,0	0/0:25,0:25:66.16:0,66,709	0/0:32,0:32:90.23:0,90,967	0/0:29,0:29:66.14:0,66,697	0/0:18,0:18:51.13:0,51,548	1/1:5,24:29:75.22:956,75,0	1/1:0,26:26:72.23:945,72,0	1/1:1,18:19:51.17:671,51,0	1/1:0,23:24:60.19:783,60,0	0/0:32,0:32:93.23:0,93,999	0/0:28,0:28:69.16:0,69,733	1/1:2,26:28:72.23:947,72,0	0/0:24,0:24:72.16:0,72,763	0/0:20,0:20:51.13:0,51,548	1/1:2,25:27:72.21:930,72,0	1/1:5,20:25:57.14:725,57,0	1/1:3,20:23:63.18:811,63,0	1/1:6,25:31:52.41:1004,52,0	1/1:3,22:25:60.19:783,60,0	1/1:2,24:26:57.19:750,57,0	1/1:1,17:18:42.11:535,42,0	0/0:27,1:28:35.71:0,36,735	1/1:1,25:26:65.94:868,66,0	0/0:9,0:9:27:0,27,267
chr10	78467522	.	AAGGAGG	A	3549.13	PASS	AB=0.981;AC=24;AF=0.480;AN=50;BaseQRankSum=5.419;DP=481;FS=12.333;HRun=0;HaplotypeScore=111.3883;InbreedingCoeff=0.4903;MQ=71.60;MQ0=5;MQRankSum=-7.700;QD=14.20;ReadPosRankSum=1.885;VQSLOD=2.0224;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:33.06:0,33,636	./.	0/0:20,0:14:3.01:0,3,91	0/0:22,0:18:3:0,3,25	1/1:14,4:18:12.04:247,12,0	0/0:10,0:10:9:0,9,146	0/0:33,0:32:41.08:0,41,1065	1/1:12,1:13:2.68:61,3,0	0/0:8,0:8:6:0,6,51	1/1:19,7:26:24.07:447,24,0	1/1:10,6:15:12.47:194,12,0	0/0:13,0:15:20.97:0,21,491	0/0:16,0:15:12.04:0,12,237	0/0:9,0:9:6.02:0,6,129	./.	1/1:8,13:22:33.11:660,33,0	0/1:20,0:19:10.94:11,0,319	0/1:11,0:11:17.79:18,0,332	1/1:9,1:9:3.01:62,3,0	1/1:17,3:20:11.99:204,12,0	1/1:20,2:23:6.34:137,6,0	0/0:10,0:9:9.01:0,9,108	./.	0/0:15,0:22:12.04:0,12,272	1/1:26,0:25:39.13:783,39,0	0/1:11,0:12:69.56:70,0,72	1/1:13,14:26:30.10:618,30,0	0/1:6,0:6:19.91:36,0,20
chr10	78467553	.	AGGAG	A	685.07	PASS	AB=0.919;AC=9;AF=0.161;AN=56;BaseQRankSum=11.403;DP=494;FS=3.162;HRun=0;HaplotypeScore=103.9198;InbreedingCoeff=-0.2032;MQ=51.01;MQ0=7;MQRankSum=-9.599;QD=4.26;ReadPosRankSum=8.691;VQSLOD=0.9084;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.27:0,93,1489	0/0:2,0:2:6.02:0,6,83	0/0:31,0:10:24.22:0,24,336	0/0:30,0:13:30.05:0,30,364	0/1:10,0:10:44.12:44,0,158	0/0:16,0:16:40.93:0,41,575	0/0:30,0:29:70.79:0,71,1397	0/0:26,0:26:58.80:0,59,982	0/0:8,0:8:21.05:0,21,257	0/1:20,0:20:72.70:73,0,420	0/1:10,0:11:21.31:21,0,128	0/0:27,0:27:72.19:0,72,1160	0/0:14,0:13:36.07:0,36,518	0/0:14,0:14:39.13:0,39,637	0/0:7,0:7:13.86:0,14,169	0/1:24,0:25:99:133,0,342	0/0:23,0:22:43.76:0,44,767	0/1:16,0:16:3.96:4,0,654	0/0:6,0:6:0.25:0,0,166	0/1:10,0:12:20.42:20,0,284	0/1:22,0:22:14.75:15,0,400	0/0:12,0:11:26.77:0,27,331	0/0:7,0:7:18.06:0,18,277	0/0:20,0:19:39.09:0,39,608	0/1:10,13:23:43.96:377,0,44	0/0:22,0:22:39.46:0,39,602	0/1:20,0:19:99:133,0,164	0/0:6,0:6:14.26:0,14,183
chr10	78467851	.	TCA	T	13099.24	PASS	AB=0.933;AC=45;AF=0.804;AN=56;BaseQRankSum=13.023;DP=649;FS=0.833;HRun=0;HaplotypeScore=116.9626;InbreedingCoeff=0.8904;MQ=68.20;MQ0=0;MQRankSum=-1.851;QD=26.25;ReadPosRankSum=3.604;VQSLOD=5.6286;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:84.27:0,84,1339	1/1:2,8:10:24.08:296,24,0	0/0:34,0:27:51.16:0,51,783	0/0:21,0:16:36.05:0,36,530	1/1:2,17:19:45.14:550,45,0	0/0:33,0:33:75.26:0,75,1224	0/0:22,0:22:51.15:0,51,806	1/1:10,19:29:54.16:655,54,0	1/1:0,15:15:42.13:517,42,0	1/1:4,18:22:54.15:642,54,0	1/1:3,24:27:69.22:849,69,0	1/1:7,17:24:42.13:515,42,0	1/1:3,15:18:45.14:554,45,0	1/1:3,18:21:27.26:567,27,0	1/1:2,21:23:63.20:776,63,0	1/1:5,22:27:10.58:618,11,0	1/1:6,20:27:36.74:444,37,0	0/1:13,1:14:3.87:4,0,427	1/1:3,17:19:48.12:566,48,0	1/1:6,29:35:87.27:1071,87,0	1/1:2,17:19:45.14:554,45,0	1/1:3,20:23:54.17:665,54,0	1/1:4,24:28:57.14:702,57,0	1/1:2,18:20:35.79:443,36,0	1/1:5,15:20:42.13:514,42,0	1/1:5,19:24:60.17:722,60,0	1/1:6,16:22:5.79:545,6,0	1/1:3,9:12:27.08:332,27,0
chr10	78468055	.	TTTAGTTC	T	1014.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.419;DP=675;FS=1.989;HRun=0;HaplotypeScore=148.9724;InbreedingCoeff=0.9945;MQ=82.24;MQ0=0;MQRankSum=-4.594;QD=53.42;ReadPosRankSum=-0.115;VQSLOD=3.7832;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,5293	0/0:9,0:9:27.09:0,27,1020	0/0:22,0:22:45.60:0,46,2128	0/0:27,0:27:31.46:0,31,2316	0/0:17,0:17:48.16:0,48,1903	0/0:16,0:16:48.16:0,48,1797	0/0:34,0:34:99:0,102,3690	0/0:30,0:30:84.28:0,84,2960	0/0:19,0:19:57.20:0,57,2287	0/0:27,0:27:81.28:0,81,3137	0/0:17,0:17:51.17:0,51,1891	0/0:22,0:22:63.22:0,63,2466	0/0:19,0:19:57.20:0,57,2034	0/0:27,0:27:81.26:0,81,3115	0/0:36,0:36:99:0,108,4226	0/0:28,0:28:84.29:0,84,3331	0/0:28,0:28:78.27:0,78,2945	1/1:0,19:19:42.14:1110,42,0	0/0:25,0:25:75.23:0,75,2526	0/0:29,0:29:87.28:0,87,3358	0/0:34,0:34:99:0,99,3802	0/0:20,0:20:57.20:0,57,2285	0/0:16,0:16:48.15:0,48,1828	0/0:31,0:31:81.26:0,81,3062	0/0:18,0:18:51.18:0,51,1929	0/0:24,0:24:72.25:0,72,2726	0/0:25,0:25:72.25:0,72,2873	0/0:7,0:7:21.07:0,21,859
chr10	78468733	.	ACTTCCTAAAC	A	2674.14	PASS	AB=0.538;AC=3;AF=0.056;AN=54;BaseQRankSum=8.209;DP=656;FS=0.000;HRun=0;HaplotypeScore=195.7010;InbreedingCoeff=0.6391;MQ=92.13;MQ0=0;MQRankSum=-7.658;QD=70.37;ReadPosRankSum=0.494;VQSLOD=2.9806;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,5282	0/0:9,0:9:27.09:0,27,1353	0/0:39,0:39:99:0,105,4218	0/0:22,0:22:49.12:0,49,2420	0/0:27,0:27:81.28:0,81,4015	0/0:14,0:14:42.14:0,42,2223	0/0:28,0:28:84.27:0,84,3906	0/0:21,0:21:54.19:0,54,2726	0/0:21,0:21:57.20:0,57,2958	0/0:35,0:35:96.33:0,96,4818	0/0:15,0:15:39.13:0,39,1885	0/0:25,0:25:63.22:0,63,2813	0/0:19,0:19:39.13:0,39,1568	0/0:32,0:32:90.31:0,90,4298	0/0:25,0:25:72.25:0,72,3804	0/0:12,0:12:36.12:0,36,1791	0/0:33,0:33:84.25:0,84,3981	1/1:5,5:10:18.06:593,18,0	0/0:14,0:14:39.13:0,39,1803	0/0:25,0:25:72.25:0,72,3532	0/0:35,0:35:99:0,99,4860	0/0:26,0:26:78.25:0,78,3797	0/0:19,0:19:54.19:0,54,2562	0/0:41,0:41:87.30:0,87,4597	0/0:13,0:13:33.11:0,33,1637	0/1:4,24:28:99:2184,0,237	0/0:29,0:29:81.28:0,81,4262	./.
chr10	78468820	.	TGTG	T	3958.29	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-5.568;DP=647;FS=5.329;HRun=0;HaplotypeScore=147.4317;InbreedingCoeff=0.8418;MQ=75.19;MQ0=6;MQRankSum=-2.749;QD=25.37;ReadPosRankSum=3.661;VQSLOD=3.6938;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.12:0,72,1226	0/0:7,0:7:10.41:0,10,46	0/0:34,0:28:77.87:0,78,870	0/0:23,0:16:20.29:0,20,375	0/0:27,0:27:39.43:0,39,194	0/0:19,0:19:45.01:0,45,709	0/0:28,0:28:81.15:0,81,1477	0/0:20,0:20:47.49:0,47,264	0/0:24,0:24:36.78:0,37,443	0/0:20,0:20:45.07:0,45,227	0/0:10,0:10:20.16:0,20,77	1/1:3,20:23:51.17:883,51,0	1/1:1,24:24:42.14:731,42,0	0/1:30,0:30:32.34:32,0,429	0/0:27,0:26:48.91:0,49,556	0/0:20,0:20:45.02:0,45,170	0/0:33,0:32:54.03:0,54,573	0/0:15,0:15:30.91:0,31,137	0/0:26,0:26:66.47:0,66,422	0/0:29,0:29:74.31:0,74,407	0/0:33,0:33:69.98:0,70,333	1/1:3,18:21:33.11:576,33,0	1/1:6,13:19:44.11:655,44,0	1/1:1,35:37:63.21:1081,63,0	0/0:11,0:11:18.21:0,18,95	0/0:30,0:30:70.08:0,70,407	0/0:24,0:23:47.25:0,47,248	0/0:2,0:2:2.50:0,2,9
chr10	78468822	.	TGG	T	6760.89	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=8.570;DP=624;FS=0.366;HRun=10;HaplotypeScore=122.5866;InbreedingCoeff=0.9277;MQ=74.23;MQ0=6;MQRankSum=-1.135;QD=17.52;ReadPosRankSum=3.613;VQSLOD=3.2798;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:26:53.65:0,54,775	1/1:0,7:7:9.02:100,9,0	0/0:31,0:25:12:0,12,284	0/0:22,0:16:7.88:0,8,188	1/1:4,22:26:57.14:630,57,0	0/0:15,0:17:41.07:0,41,503	0/0:30,0:30:66.18:0,66,979	1/1:4,16:21:38.97:470,39,0	0/0:5,0:22:43.54:0,44,149	1/1:4,14:18:39.09:434,39,0	1/1:0,10:10:24.06:266,24,0	1/1:22,0:22:45.60:184,46,0	1/1:25,0:24:37.31:151,37,0	0/0:5,0:29:54.91:0,55,205	0/0:4,0:25:54.77:0,55,188	1/1:1,19:20:54.15:601,54,0	0/0:4,1:32:26.21:0,26,162	1/1:1,13:14:30.08:334,30,0	1/1:9,16:25:39.52:481,40,0	1/1:7,20:27:60.13:665,60,0	1/1:5,27:32:66.17:735,66,0	1/1:21,0:20:6.26:93,6,0	1/1:17,0:17:16.47:112,16,0	1/1:37,0:37:56.53:235,57,0	1/1:3,7:10:15.04:165,15,0	1/1:15,14:29:53.76:570,54,0	1/1:3,20:23:44.97:501,45,0	1/1:0,2:2:3.01:33,3,0
chr10	78468831	.	GGA	G	1257.13	PASS	AB=0.991;AC=21;AF=0.375;AN=56;BaseQRankSum=8.001;DP=587;FS=21.173;HRun=0;HaplotypeScore=131.5613;InbreedingCoeff=0.3060;MQ=70.85;MQ0=6;MQRankSum=0.465;QD=4.52;ReadPosRankSum=4.496;VQSLOD=1.5194;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:62.94:0,63,902	0/1:8,0:8:15.63:16,0,16	0/1:21,0:18:7.21:7,0,389	0/0:18,0:11:21.44:0,21,271	1/1:26,0:26:10.55:179,11,0	0/0:17,0:17:50.86:0,51,681	0/0:25,0:25:75.21:0,75,1138	0/1:24,0:24:38.88:39,0,163	0/0:22,0:22:60.31:0,60,332	0/1:18,0:18:54.33:54,0,76	0/1:11,0:11:1.61:80,0,2	0/0:18,2:20:31.93:0,32,177	0/0:22,0:21:34.47:0,34,152	0/0:31,0:31:68.37:0,68,413	0/0:27,0:26:70.69:0,71,376	1/1:20,1:21:23.62:170,24,0	0/0:32,0:31:62.45:0,62,372	1/1:14,0:14:2.20:75,2,0	0/1:20,0:20:40.32:103,0,40	1/1:22,1:23:7.88:235,8,0	1/1:29,0:29:31.29:183,31,0	0/0:20,0:19:25.83:0,26,173	0/0:18,0:18:34.14:0,34,180	0/0:34,1:35:60.08:0,60,347	0/1:10,1:11:32.90:58,0,33	0/1:26,0:26:90.07:90,0,139	0/1:23,0:22:3.43:138,0,3	1/1:2,0:2:2.50:9,2,0
chr10	78469552	.	T	TC	6370.91	PASS	AB=0.794;AC=30;AF=0.536;AN=56;BaseQRankSum=-4.640;DP=557;FS=0.356;HRun=9;HaplotypeScore=66.7948;InbreedingCoeff=0.7619;MQ=70.46;MQ0=1;MQRankSum=-0.873;QD=20.55;ReadPosRankSum=-1.307;VQSLOD=4.8930;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:32.97:0,33,281	1/1:0,11:11:30.08:332,30,0	0/1:16,0:13:10.55:11,0,24	0/1:6,0:6:1.47:1,0,4	1/1:5,27:32:72.14:781,72,0	0/0:31,0:32:57.79:0,58,654	0/0:22,0:22:53.97:0,54,464	1/1:11,15:26:37.11:356,37,0	0/1:6,14:20:9.99:356,0,10	1/1:2,22:24:66.14:716,66,0	1/1:5,11:16:27.07:298,27,0	0/0:21,0:21:50.94:0,51,436	0/0:20,0:20:56.98:0,57,495	1/1:2,8:10:18.05:199,18,0	1/1:4,15:19:35.79:372,36,0	1/1:1,15:16:36.10:398,36,0	1/1:1,20:21:54.15:597,54,0	0/0:15,0:15:35.95:0,36,306	0/1:5,12:17:9.84:324,0,10	1/1:2,13:15:32.97:335,33,0	1/1:5,15:19:13.05:372,13,0	0/0:31,0:31:92.98:0,93,805	0/0:24,0:24:59.98:0,60,521	0/0:22,0:23:55.96:0,56,461	1/1:4,15:19:13.04:363,13,0	0/0:31,0:31:47.72:0,48,635	1/1:2,20:21:51.13:560,51,0	0/0:10,0:10:26.99:0,27,234
chr10	78469913	.	T	TC	1198.68	PASS	AB=0.588;AC=9;AF=0.161;AN=56;BaseQRankSum=-0.511;DP=499;FS=21.791;HRun=10;HaplotypeScore=57.5630;InbreedingCoeff=0.8713;MQ=77.27;MQ0=0;MQRankSum=-0.067;QD=14.98;ReadPosRankSum=-0.602;VQSLOD=2.0169;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:38.89:0,39,314	0/0:8,0:8:17.96:0,18,147	0/0:17,0:17:12.88:0,13,159	0/0:10,0:10:8.88:0,9,64	0/0:22,0:25:66.57:0,67,509	0/0:26,0:26:50.88:0,51,418	0/0:9,0:9:23.97:0,24,197	0/0:31,0:31:40.92:0,41,325	0/0:17,0:17:41.94:0,42,345	0/0:21,0:23:41.48:0,41,346	0/0:14,0:14:38.95:0,39,318	1/1:5,12:17:24.05:250,24,0	0/1:3,7:10:3.49:170,0,3	0/0:18,0:18:41.92:0,42,341	0/0:10,0:10:26.97:0,27,222	0/0:20,0:20:44.89:0,45,363	0/0:27,0:27:65.86:0,66,538	0/0:0,0:16:26.26:0,26,76	0/0:20,0:19:38.92:0,39,320	0/0:18,0:18:32.82:0,33,261	0/0:19,0:19:38.92:0,39,317	1/1:5,10:15:27.07:288,27,0	1/1:4,16:20:16.18:302,16,0	1/1:1,17:18:33.08:352,33,0	0/0:22,0:23:55.96:0,56,449	0/0:17,0:17:35.95:0,36,295	0/0:29,0:30:73.94:0,74,595	0/0:4,0:4:8.99:0,9,74
chr10	78471181	.	T	TA	9183.06	PASS	AB=0.598;AC=42;AF=0.750;AN=56;BaseQRankSum=5.202;DP=432;FS=20.115;HRun=1;HaplotypeScore=131.5593;InbreedingCoeff=0.5968;MQ=45.65;MQ0=16;MQRankSum=-4.527;QD=26.09;ReadPosRankSum=4.678;VQSLOD=3.4015;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:52.04:0,52,694	1/1:1,5:6:15.93:213,16,0	0/0:13,0:8:24.08:0,24,336	0/0:9,0:7:18.06:0,18,252	1/1:0,8:14:18.06:266,18,0	0/0:17,0:15:18.06:0,18,250	0/0:17,0:15:35.56:0,36,479	0/1:10,20:25:37.72:837,0,38	1/1:1,12:15:33.11:499,33,0	1/1:4,15:21:63.18:890,63,0	1/1:0,8:8:9.03:142,9,0	1/1:2,12:13:28.23:378,28,0	1/1:3,12:15:32.82:446,33,0	1/1:0,13:15:36.07:504,36,0	1/1:2,11:16:27.05:379,27,0	1/1:6,8:14:20.48:245,20,0	0/1:4,8:9:12.09:217,0,12	1/1:1,7:7:18.06:275,18,0	1/1:0,7:8:24.08:359,24,0	1/1:4,20:25:26.62:635,27,0	1/1:1,15:16:26.12:384,26,0	1/1:0,6:5:6.02:93,6,0	1/1:2,9:10:9.39:102,9,0	1/1:2,5:6:5.47:57,5,0	1/1:3,8:14:27.09:413,27,0	0/1:9,19:26:37.47:912,0,37	1/1:3,17:24:20.38:721,20,0	0/1:2,6:7:1.30:218,0,1
chr10	78471183	.	ATT	A	4709.96	PASS	AB=0.973;AC=41;AF=0.732;AN=56;BaseQRankSum=2.601;DP=428;FS=17.915;HRun=2;HaplotypeScore=152.8368;InbreedingCoeff=0.4495;MQ=45.30;MQ0=18;MQRankSum=-1.889;QD=13.50;ReadPosRankSum=3.696;VQSLOD=0.7074;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:51.40:0,51,917	1/1:6,1:6:14.15:112,14,0	0/0:13,0:8:24.04:0,24,437	0/0:9,0:7:18.06:0,18,350	1/1:8,6:14:16.93:129,17,0	0/0:17,0:15:18:0,18,264	0/0:16,0:14:32.47:0,32,556	0/1:32,0:26:56.14:437,0,56	1/1:13,2:15:17.45:163,17,0	1/1:20,5:21:60.91:577,61,0	1/1:8,0:8:9.01:85,9,0	1/1:14,1:13:9.65:149,10,0	1/1:15,1:15:2.80:91,3,0	1/1:14,3:16:35.84:289,36,0	1/1:13,4:16:26.73:222,27,0	1/1:12,2:12:16.89:129,17,0	0/1:11,0:7:23.87:79,0,24	1/1:8,0:7:17.94:143,18,0	1/1:7,1:8:24.02:233,24,0	0/1:24,2:25:13.53:309,0,14	1/1:16,0:16:14.98:218,15,0	1/1:6,0:5:5.01:27,5,0	1/1:11,0:10:9.35:58,9,0	1/1:7,0:6:3:29,3,0	1/1:11,5:14:12.69:222,13,0	0/1:27,2:25:72.67:491,0,73	1/1:20,4:23:15.02:394,15,0	0/1:7,0:6:10.15:124,0,10
chr10	78471185	.	T	TGATA	411.18	PASS	AB=0.994;AC=33;AF=0.660;AN=50;BaseQRankSum=-1.409;DP=438;FS=1.255;HRun=0;HaplotypeScore=197.6828;InbreedingCoeff=0.1181;MQ=42.88;MQ0=20;MQRankSum=-1.480;QD=1.12;ReadPosRankSum=-1.586;VQSLOD=2.1484;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:22:6.84:7,0,173	1/1:7,0:6:0.82:14,1,0	./.	./.	1/1:14,0:14:1.89:4,2,0	1/1:7,12:16:3.01:71,3,0	1/1:16,0:14:3.46:25,3,0	1/1:34,0:28:6.59:38,7,0	1/1:15,0:15:12.17:136,12,0	0/1:27,0:23:12.55:17,0,13	0/1:10,0:10:0:0,0,0	0/1:17,0:15:5.51:10,0,6	0/0:15,0:14:5.58:0,6,15	1/1:17,0:15:3.29:49,3,0	1/1:16,0:16:4.29:60,4,0	0/1:13,0:11:6.14:6,0,8	1/1:12,0:8:0.86:2,1,0	0/0:9,0:8:2.84:0,3,14	0/0:8,0:8:2.22:0,2,7	1/1:26,0:25:4.15:20,4,0	1/1:16,0:16:3.90:45,4,0	./.	1/1:11,0:10:2.49:6,2,0	0/0:8,0:7:1.25:0,1,3	1/1:16,0:14:1.41:3,1,0	0/1:31,0:27:14.96:15,0,70	0/1:23,0:23:6.63:7,0,21	0/0:7,0:6:3:0,3,27
chr10	78471213	.	A	ACATC	696.18	PASS	AB=0.972;AC=11;AF=0.212;AN=52;BaseQRankSum=3.937;DP=385;FS=13.325;HRun=0;HaplotypeScore=227.0081;InbreedingCoeff=-0.2973;MQ=32.20;MQ0=31;MQRankSum=-5.253;QD=3.87;ReadPosRankSum=0.398;VQSLOD=1.3943;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:18:34.44:0,34,533	0/1:6,0:5:33.74:52,0,34	./.	./.	0/0:9,0:9:12.03:0,12,133	0/0:26,0:23:8.53:0,9,419	0/0:19,0:16:8.91:0,9,71	0/1:55,0:45:93.50:93,0,668	0/1:6,5:11:8.23:323,0,8	0/0:24,0:19:22.45:0,22,500	0/0:11,0:9:2.24:0,2,8	0/1:15,0:13:36.29:36,0,36	0/1:14,0:13:37.83:48,0,38	0/1:10,0:9:12.03:57,0,12	0/1:11,0:10:13.56:119,0,14	0/0:11,0:9:0.33:0,0,110	0/1:11,0:5:25.69:26,0,30	0/0:7,0:6:10.41:0,10,114	0/1:13,0:9:9.07:9,0,199	0/0:16,0:15:29.05:0,29,348	0/1:13,0:13:37.81:38,0,104	0/0:4,0:4:0.15:0,0,19	0/0:8,0:7:3.75:0,4,59	0/0:8,0:6:3.01:0,3,30	0/0:13,0:10:24.08:0,24,331	0/0:24,0:18:34.39:0,34,497	0/1:21,0:20:29.47:29,0,479	0/0:3,0:2:5.95:0,6,71
chr10	78471215	.	A	AT	293.81	PASS	AB=0.892;AC=11;AF=0.212;AN=52;BaseQRankSum=3.116;DP=379;FS=2.005;HRun=1;HaplotypeScore=214.3506;InbreedingCoeff=0.0755;MQ=32.22;MQ0=31;MQRankSum=-3.260;QD=2.91;ReadPosRankSum=-0.693;VQSLOD=-0.5815;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:18:25.61:0,26,442	0/1:6,0:5:3.34:17,0,3	./.	./.	0/0:9,0:9:11.35:0,11,155	0/0:26,0:23:31.22:0,31,392	0/0:20,0:17:5.03:0,5,46	0/0:54,0:44:73.29:0,73,686	0/1:8,2:10:8.11:58,0,8	0/0:24,0:19:44.79:0,45,415	1/1:11,0:9:2.48:8,2,0	0/1:15,0:13:58.98:59,0,117	0/0:14,0:13:6.28:0,6,172	0/1:7,3:9:19.61:107,0,20	0/1:7,4:10:20.84:115,0,21	0/0:9,1:8:15.50:0,16,122	0/1:11,0:5:32.88:39,0,33	0/0:6,0:5:12.41:0,12,128	0/0:13,0:9:22.77:0,23,181	0/0:16,0:15:29:0,29,327	0/0:11,1:12:12.81:0,13,146	0/0:4,0:4:2.22:0,2,7	0/0:8,0:7:5.79:0,6,74	1/1:8,0:6:2.54:11,3,0	0/0:13,0:10:24.08:0,24,312	0/0:23,1:18:16.35:0,16,438	0/1:17,2:18:14.23:14,0,360	0/0:3,0:2:5.38:0,5,41
chr10	78471228	.	T	TA	857	PASS	AB=0.827;AC=29;AF=0.580;AN=50;BaseQRankSum=3.262;DP=328;FS=8.074;HRun=1;HaplotypeScore=186.0691;InbreedingCoeff=-0.1780;MQ=30.88;MQ0=29;MQRankSum=-3.176;QD=3.07;ReadPosRankSum=-0.022;VQSLOD=-0.6728;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,3:18:36.77:37,0,342	1/1:4,1:3:2.50:22,2,0	./.	./.	1/1:1,0:8:12.04:173,12,0	0/0:30,0:27:46.86:0,47,633	1/1:17,3:16:2.93:25,3,0	0/1:38,3:37:76.76:77,0,613	0/1:8,0:10:17.79:28,0,18	0/1:12,2:15:61.47:80,0,61	1/1:10,1:8:2.70:8,3,0	0/1:10,0:11:1.08:1,0,87	0/1:12,0:12:18.67:19,0,131	0/1:6,0:8:3.82:40,0,4	0/1:6,0:9:4.66:73,0,5	0/1:6,0:7:11.57:51,0,12	0/0:9,1:5:5.54:0,6,45	0/1:4,2:5:6.10:128,0,6	0/1:6,0:7:0.41:0,0,97	0/1:7,0:7:15.09:15,0,46	1/1:4,5:10:5.60:109,6,0	1/1:3,0:4:1.82:5,2,0	1/1:7,0:6:4.74:15,5,0	./.	0/1:5,0:5:7.86:37,0,8	0/1:17,0:14:2.91:3,0,225	0/1:6,0:12:1.73:49,0,2	0/0:3,0:2:5.96:0,6,45
chr10	78471235	.	TA	T	468.53	PASS	AB=0.852;AC=20;AF=0.400;AN=50;BaseQRankSum=5.433;DP=316;FS=4.049;HRun=1;HaplotypeScore=178.8648;InbreedingCoeff=-0.0994;MQ=30.62;MQ0=30;MQRankSum=-4.166;QD=3.06;ReadPosRankSum=0.103;VQSLOD=-0.1481;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:18:22.62:0,23,482	1/1:5,0:3:5.35:44,5,0	./.	./.	0/0:8,0:8:4.23:0,4,11	0/0:29,0:26:51.17:0,51,815	0/0:21,0:16:2.50:0,2,25	0/0:38,0:32:58.12:0,58,741	0/1:7,2:8:0.63:40,0,1	0/0:20,0:15:36.73:0,37,292	0/0:11,0:8:1.46:0,1,6	0/1:12,1:11:6.07:6,0,18	0/1:10,1:10:29.49:32,0,29	1/1:6,2:7:5.40:49,5,0	0/1:6,3:8:7.55:71,0,8	0/1:8,1:7:20.06:20,0,48	0/1:8,3:5:34.91:36,0,35	0/1:6,0:5:18.51:19,0,32	0/1:9,1:8:28.02:28,0,129	0/1:5,3:7:51.78:72,0,52	0/1:8,2:10:0.68:1,0,78	1/1:3,0:3:2.74:12,3,0	0/0:6,0:5:0:0,0,0	./.	1/1:7,1:5:1.45:39,1,0	0/1:15,4:13:63.47:63,0,91	0/1:11,3:12:76.63:77,0,91	0/0:3,0:2:5.70:0,6,30
chr10	78471245	.	G	GGTAA	1443.76	PASS	AB=0.952;AC=27;AF=0.563;AN=48;BaseQRankSum=4.918;DP=294;FS=25.290;HRun=0;HaplotypeScore=173.1378;InbreedingCoeff=-0.0420;MQ=31.46;MQ0=32;MQRankSum=-6.770;QD=7.48;ReadPosRankSum=-0.824;VQSLOD=1.3508;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:21:35.15:0,35,655	0/1:5,0:3:1.59:65,0,2	./.	./.	0/1:6,1:7:0.82:1,0,1	0/0:32,0:29:57.20:0,57,1158	0/0:19,0:15:2.96:0,3,50	0/0:15,0:8:9.56:0,10,78	1/1:7,0:6:4.11:16,4,0	0/1:18,0:13:23.38:342,0,23	1/1:11,2:10:2.49:21,2,0	1/1:6,4:8:9.34:89,9,0	0/1:8,1:8:26.81:92,0,27	1/1:8,1:7:4.40:19,4,0	0/1:8,2:9:1.15:109,0,1	0/1:9,1:8:3.42:187,0,3	1/1:9,0:3:1.53:4,2,0	0/1:6,0:5:3.11:61,0,3	0/1:8,0:5:27.73:28,0,43	0/1:8,0:7:12.58:13,0,85	0/1:10,0:10:1.16:1,0,2	1/1:2,0:2:2.74:12,3,0	./.	./.	0/1:12,0:9:5.92:6,0,9	0/1:16,3:13:99:322,0,106	0/1:18,0:16:18.20:126,0,18	1/1:3,0:2:3.01:65,3,0
chr10	78471247	.	T	TA	1510.48	PASS	AB=0.785;AC=32;AF=0.640;AN=50;BaseQRankSum=5.193;DP=273;FS=25.417;HRun=1;HaplotypeScore=150.4085;InbreedingCoeff=-0.0135;MQ=31.93;MQ0=31;MQRankSum=-6.821;QD=8.39;ReadPosRankSum=0.660;VQSLOD=-0.3972;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,1:21:11.98:0,12,435	0/1:4,1:3:5.01:24,0,5	./.	./.	1/1:4,0:4:4.26:43,4,0	0/0:32,0:29:60.20:0,60,837	0/0:19,0:15:2.98:0,3,43	0/1:6,1:3:38.89:39,0,58	1/1:4,3:6:3.33:91,3,0	0/1:9,7:12:36.97:204,0,37	1/1:8,4:10:5.26:67,5,0	1/1:8,2:8:4.59:26,5,0	0/1:5,4:8:0.50:128,0,0	0/1:6,3:7:0.81:40,0,1	1/1:8,2:9:3.69:113,4,0	1/1:6,3:7:1.89:138,2,0	0/0:8,1:3:0.47:0,0,1	1/1:1,3:3:4.88:88,5,0	0/1:6,0:4:19.90:20,0,41	0/1:6,2:7:32.88:66,0,33	1/1:3,3:8:1.33:3,1,0	1/1:1,1:2:3.01:45,3,0	0/1:1,2:2:0:0,0,0	./.	1/1:11,0:8:13.29:174,13,0	0/1:16,3:13:93.53:148,0,94	0/1:13,2:13:26:166,0,26	1/1:1,2:2:2.99:23,3,0
chr10	78471263	.	AGAT	A	1375.29	PASS	AB=0.950;AC=32;AF=0.667;AN=48;BaseQRankSum=6.640;DP=270;FS=50.598;HRun=0;HaplotypeScore=131.3674;InbreedingCoeff=0.2346;MQ=32.50;MQ0=37;MQRankSum=-6.751;QD=9.23;ReadPosRankSum=-1.711;VQSLOD=1.2026;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:42.05:0,42,847	1/1:4,0:2:2.97:20,3,0	./.	./.	1/1:3,1:3:3.01:39,3,0	0/0:32,0:29:69.24:0,69,1460	0/0:19,0:15:10.59:0,11,192	0/0:8,0:5:10.80:0,11,162	1/1:6,1:6:1.40:59,1,0	0/1:12,0:8:13.16:74,0,13	1/1:11,2:10:1.52:24,2,0	1/1:7,1:6:3.29:47,3,0	1/1:5,2:6:8.98:132,9,0	1/1:7,1:6:2.13:46,2,0	1/1:6,1:6:8.68:137,9,0	1/1:5,2:5:0.64:86,1,0	0/0:8,0:2:0.47:0,0,1	0/0:4,0:3:1.55:0,2,5	0/1:7,0:4:30.74:31,0,57	0/1:8,1:7:46.19:46,0,58	1/1:4,2:6:0.88:2,1,0	1/1:1,1:2:2.84:47,3,0	./.	./.	1/1:8,5:10:15.31:163,15,0	0/1:16,2:12:37.98:318,0,38	1/1:13,0:11:21.41:213,21,0	1/1:3,1:3:3.01:36,3,0
chr10	78471266	.	T	TA	1751.89	PASS	AB=0.794;AC=32;AF=0.667;AN=48;BaseQRankSum=5.925;DP=268;FS=44.934;HRun=1;HaplotypeScore=121.5157;InbreedingCoeff=0.2183;MQ=32.65;MQ0=37;MQRankSum=-7.250;QD=11.76;ReadPosRankSum=0.374;VQSLOD=-0.2553;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,1:27:46.03:0,46,601	1/1:3,1:2:4.82:35,5,0	./.	./.	1/1:1,3:3:3.01:42,3,0	0/0:31,0:28:69.23:0,69,965	0/0:18,1:15:14.96:0,15,188	0/0:7,0:4:12:0,12,136	0/1:3,4:6:0.74:85,0,1	1/1:8,4:8:0.09:249,0,0	0/1:9,4:10:0.45:80,0,0	1/1:2,6:6:2.14:45,2,0	1/1:5,2:6:8.86:123,9,0	1/1:2,6:6:2.46:44,2,0	1/1:2,5:6:8.56:132,9,0	1/1:6,1:5:5.76:125,6,0	0/0:7,0:2:0.47:0,0,1	0/1:4,0:3:2.17:11,0,2	0/1:6,1:4:31.03:43,0,31	0/1:5,3:6:33.34:33,0,48	1/1:4,2:6:0.39:1,0,0	1/1:1,1:2:3.01:45,3,0	./.	./.	1/1:9,3:9:0.03:157,0,0	0/1:11,5:10:11.82:329,0,12	1/1:5,8:11:21.68:272,22,0	1/1:2,2:3:3.01:41,3,0
chr10	78471296	.	TA	T	911.01	PASS	AB=0.693;AC=24;AF=0.522;AN=46;BaseQRankSum=5.129;DP=235;FS=31.117;HRun=1;HaplotypeScore=109.8612;InbreedingCoeff=0.1975;MQ=36.26;MQ0=14;MQRankSum=-5.653;QD=9.49;ReadPosRankSum=-2.200;VQSLOD=-0.6110;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:26:44.84:0,45,724	0/1:2,2:3:26.03:39,0,26	./.	./.	1/1:2,4:5:2.92:35,3,0	0/0:26,0:26:72.25:0,72,1144	0/0:14,0:12:29.85:0,30,474	0/1:4,3:6:97.43:108,0,97	1/1:2,1:2:3.01:42,3,0	0/1:2,5:6:25.82:175,0,26	0/1:5,3:7:1.08:3,0,1	./.	1/1:1,2:3:5.75:40,6,0	./.	1/1:1,1:2:6:66,6,0	1/1:3,2:5:2.97:40,3,0	0/0:6,0:2:0.47:0,0,1	0/0:4,0:4:3.37:0,3,89	0/1:3,1:4:33.83:34,0,46	0/1:8,7:14:46.23:46,0,73	0/0:5,3:8:0.12:0,0,32	1/1:1,3:2:0.36:1,0,0	1/1:0,4:4:3.36:42,3,0	./.	1/1:2,10:11:5.41:140,5,0	0/0:16,0:16:41.01:0,41,529	1/1:3,9:11:15.76:242,16,0	0/0:2,0:2:3.01:0,3,37
chr10	78471304	.	T	TA	1142.51	PASS	AB=0.876;AC=22;AF=0.458;AN=48;BaseQRankSum=6.283;DP=268;FS=27.616;HRun=1;HaplotypeScore=120.7329;InbreedingCoeff=0.1599;MQ=36.98;MQ0=11;MQRankSum=-6.490;QD=9.85;ReadPosRankSum=-0.082;VQSLOD=-0.0356;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,6:27:22.25:0,22,565	0/1:3,0:3:34.76:41,0,35	./.	./.	0/1:11,2:12:14.71:15,0,142	0/0:27,0:27:75.14:0,75,965	0/0:12,0:11:30.06:0,30,420	0/0:8,0:5:14.90:0,15,159	0/1:3,1:5:1.53:49,0,2	0/1:8,1:8:30.45:30,0,172	0/0:5,1:7:5.04:0,5,23	0/1:1,0:2:0:0,0,0	1/1:3,0:3:3.01:39,3,0	./.	1/1:1,0:1:3:26,3,0	1/1:3,2:5:6:81,6,0	0/0:7,1:4:0.16:0,0,1	1/1:1,4:5:10.05:159,10,0	0/1:5,1:6:41.47:41,0,103	0/1:15,6:20:69.89:70,0,197	1/1:3,4:7:4.42:51,4,0	0/0:5,0:3:3:0,3,25	0/0:6,0:7:8.98:0,9,109	./.	0/1:15,1:15:13.64:44,0,14	1/1:5,11:17:3.38:594,3,0	0/0:14,1:14:4.76:0,5,270	1/1:0,1:1:3.01:48,3,0
chr10	78471350	.	A	AT	1627.17	PASS	AB=0.921;AC=26;AF=0.500;AN=52;BaseQRankSum=10.282;DP=425;FS=98.610;HRun=1;HaplotypeScore=202.0124;InbreedingCoeff=-0.0435;MQ=34.87;MQ0=15;MQRankSum=-6.026;QD=5.42;ReadPosRankSum=-6.852;VQSLOD=-0.3482;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:25:33.57:0,34,430	0/1:5,0:5:10.96:11,0,69	0/0:12,0:3:9.03:0,9,112	./.	0/0:23,3:24:23.38:0,23,311	0/0:21,0:21:51.17:0,51,658	0/0:16,0:15:39.13:0,39,501	0/1:35,12:35:99:345,0,703	1/1:10,2:12:14.23:170,14,0	0/1:29,3:28:99:192,0,651	0/1:16,1:15:30.68:55,0,31	1/1:4,0:4:8.94:85,9,0	0/1:7,0:7:20.95:98,0,21	1/1:6,4:9:11.87:80,12,0	1/1:3,1:4:2.26:20,2,0	0/1:8,2:9:60.73:61,0,134	1/1:6,1:6:5.98:65,6,0	1/1:1,5:6:15.05:197,15,0	0/0:6,0:3:9.02:0,9,103	0/1:33,2:35:56.51:57,0,348	0/0:8,1:9:2.74:0,3,39	0/1:8,0:7:11.97:12,0,69	0/1:18,1:19:16.10:16,0,210	1/1:6,0:6:2.96:20,3,0	0/1:20,3:22:82.93:127,0,83	0/1:22,0:21:83.10:83,0,489	0/1:19,7:25:99:102,0,239	./.
chr10	78471384	.	A	ATAGG	4274.37	PASS	AB=0.826;AC=26;AF=0.481;AN=54;BaseQRankSum=9.540;DP=421;FS=74.072;HRun=0;HaplotypeScore=212.2411;InbreedingCoeff=-0.0433;MQ=37.74;MQ0=8;MQRankSum=-7.632;QD=14.20;ReadPosRankSum=3.972;VQSLOD=1.7121;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:38.11:0,38,731	0/1:6,2:8:70.87:71,0,73	0/0:8,0:3:2.87:0,3,15	0/0:4,0:1:1.82:0,2,5	0/0:24,4:27:22.43:0,22,402	0/0:23,0:23:49.58:0,50,1063	0/0:18,0:18:42.14:0,42,790	0/1:28,1:23:99:233,0,470	0/1:7,8:15:16.88:409,0,17	0/1:25,4:27:99:483,0,873	0/1:11,6:15:45.24:203,0,45	1/1:3,2:5:6.49:160,6,0	1/1:7,4:11:15.02:324,15,0	1/1:5,5:9:11.83:317,12,0	1/1:4,4:8:2.65:80,3,0	0/1:11,5:15:8.01:172,0,8	0/1:8,2:7:32.08:74,0,32	1/1:4,1:4:6.02:161,6,0	0/0:5,0:4:12.04:0,12,204	0/1:26,4:30:64.17:64,0,480	0/0:6,0:6:0:0,0,0	0/1:7,1:8:70.69:71,0,105	0/1:19,5:24:99:172,0,294	1/1:4,2:5:3.01:79,3,0	1/1:16,7:23:18.17:552,18,0	0/1:15,3:17:99:201,0,467	0/1:22,6:27:99:450,0,211	./.
chr10	78471390	.	ACAT	A	1018.06	PASS	AB=0.935;AC=26;AF=0.464;AN=56;BaseQRankSum=9.464;DP=390;FS=33.680;HRun=0;HaplotypeScore=200.2862;InbreedingCoeff=-0.1787;MQ=38.18;MQ0=7;MQRankSum=-6.175;QD=3.62;ReadPosRankSum=2.608;VQSLOD=1.5108;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:11.44:0,11,864	0/1:5,1:6:22.71:23,0,83	0/0:7,0:1:2.98:0,3,22	0/0:4,0:2:1.82:0,2,5	0/0:23,2:25:23.82:0,24,428	0/0:25,0:25:41.08:0,41,1507	0/0:18,0:18:45.11:0,45,999	0/1:21,0:15:41.72:42,0,281	0/1:14,1:15:20.17:96,0,20	0/1:26,3:26:99:115,0,703	0/1:16,1:15:52.89:72,0,53	1/1:4,0:4:5.80:69,6,0	0/1:10,1:11:24.78:109,0,25	1/1:7,3:9:12.03:139,12,0	0/1:7,1:8:7.24:27,0,7	0/1:14,0:13:18.34:18,0,119	0/1:9,1:7:4.58:5,0,18	1/1:2,1:2:6.02:76,6,0	0/0:5,0:4:11.97:0,12,140	0/1:25,3:28:0.69:1,0,498	0/1:4,0:4:0:0,0,0	0/1:7,0:7:19.92:20,0,136	0/1:24,1:25:29.81:30,0,334	1/1:5,1:5:3:35,3,0	0/1:20,2:22:99:210,0,122	0/1:14,0:13:38.96:39,0,326	0/1:20,6:25:44.46:44,0,209	1/1:1,0:1:1.82:5,2,0
chr10	78471393	.	TGATAGATA	T	1589.40	PASS	AB=0.960;AC=23;AF=0.426;AN=54;BaseQRankSum=4.848;DP=388;FS=24.125;HRun=0;HaplotypeScore=208.7759;InbreedingCoeff=-0.2614;MQ=37.83;MQ0=9;MQRankSum=-4.025;QD=5.70;ReadPosRankSum=0.314;VQSLOD=1.1988;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:41.89:0,42,1439	0/1:6,0:6:71.41:71,0,74	0/0:7,0:1:3.01:0,3,37	0/0:8,0:2:2.88:0,3,15	0/1:21,1:22:41.96:117,0,42	0/0:23,0:23:54.19:0,54,2192	0/0:17,0:17:30.09:0,30,1078	0/1:16,0:10:99:219,0,200	0/1:15,0:15:29.06:29,0,99	0/1:26,3:26:99:419,0,107	1/1:14,3:15:9.68:51,10,0	1/1:5,0:4:5.49:30,5,0	0/1:9,0:11:40.17:40,0,130	1/1:10,0:9:11.73:71,12,0	0/1:8,0:8:8.18:8,0,69	0/0:14,0:13:2.47:0,2,178	0/0:8,0:7:4.09:0,4,13	0/1:5,0:4:4.02:4,0,46	0/1:5,0:4:51.43:80,0,51	0/1:21,5:26:62.86:125,0,63	./.	0/1:7,1:8:6.31:6,0,86	0/1:27,1:28:69.01:69,0,305	1/1:7,0:6:2.76:20,3,0	0/1:19,2:22:72.82:73,0,103	0/1:12,1:12:99:260,0,154	0/1:26,0:25:52.97:53,0,429	0/0:0,0:1:2.50:0,2,9
chr10	78471406	.	G	GATC	1617.10	PASS	AB=0.943;AC=24;AF=0.444;AN=54;BaseQRankSum=7.367;DP=351;FS=44.430;HRun=0;HaplotypeScore=171.5497;InbreedingCoeff=-0.3921;MQ=36.66;MQ0=7;MQRankSum=-4.766;QD=6.27;ReadPosRankSum=-5.070;VQSLOD=-0.4352;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:42.87:0,43,718	0/1:5,1:6:71.90:72,0,90	0/0:10,0:3:9:0,9,103	0/0:13,0:2:3.01:0,3,35	0/1:17,0:17:42.24:116,0,42	0/0:23,0:23:63.20:0,63,1047	0/0:17,0:17:39.13:0,39,665	0/1:14,0:9:87.11:218,0,87	0/1:11,1:12:59.08:59,0,76	0/1:24,0:21:67.65:342,0,68	0/1:13,1:12:39.16:62,0,39	1/1:4,0:3:5.59:31,6,0	0/1:11,0:11:54.43:54,0,119	1/1:8,0:8:11.73:70,12,0	0/1:8,0:8:7.81:8,0,87	0/1:12,1:12:10.36:10,0,179	0/1:8,1:5:10.94:11,0,15	0/1:6,0:5:1.14:1,0,94	0/1:3,2:3:18.06:80,0,18	0/1:18,0:18:80.74:125,0,81	./.	0/1:8,0:8:6.24:6,0,87	0/1:22,2:23:77.90:78,0,307	1/1:6,0:5:2.76:20,3,0	0/1:17,1:18:73.25:73,0,172	0/1:9,2:9:78.74:246,0,79	0/1:22,0:21:88.03:88,0,162	0/0:1,0:1:3.01:0,3,31
chr10	78471414	.	GATC	G	793.84	PASS	AB=0.976;AC=21;AF=0.389;AN=54;BaseQRankSum=4.241;DP=296;FS=10.953;HRun=0;HaplotypeScore=140.8738;InbreedingCoeff=0.2684;MQ=44.91;MQ0=6;MQRankSum=-7.359;QD=6.15;ReadPosRankSum=-1.511;VQSLOD=2.1296;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:43.86:0,44,952	1/1:4,2:6:9.56:114,10,0	0/0:19,0:7:15.51:0,16,260	0/0:15,0:4:6.47:0,6,38	1/1:8,3:11:3.03:52,3,0	0/0:25,0:25:69.24:0,69,1563	0/0:15,0:14:35.87:0,36,773	0/1:14,0:7:5.06:5,0,105	0/1:9,0:9:35.04:42,0,35	0/1:13,1:12:90.20:90,0,132	1/1:11,0:11:8.24:83,8,0	0/0:4,0:3:0:0,0,0	0/1:8,1:9:4.60:5,0,38	0/0:5,0:5:0:0,0,1	0/0:5,0:5:2.80:0,3,7	1/1:4,3:7:17.43:264,17,0	0/0:7,0:3:5.93:0,6,41	0/1:5,0:5:1.37:1,0,118	1/1:3,0:2:3.15:12,3,0	0/0:13,0:13:2.22:0,2,6	./.	0/0:5,1:6:2.88:0,3,8	0/0:17,2:18:8.01:0,8,22	0/0:5,0:4:0:0,0,0	1/1:12,4:16:11.19:204,11,0	0/1:9,0:8:16.04:16,0,84	0/1:13,0:12:9.28:9,0,84	1/1:1,1:2:3.90:52,4,0
chr10	78471416	.	T	TA	997.29	PASS	AB=0.832;AC=22;AF=0.423;AN=52;BaseQRankSum=4.207;DP=269;FS=8.848;HRun=1;HaplotypeScore=122.2707;InbreedingCoeff=0.2271;MQ=46.06;MQ0=6;MQRankSum=-6.176;QD=8.17;ReadPosRankSum=2.159;VQSLOD=0.5927;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:41.83:0,42,587	0/1:5,0:5:0.19:11,0,0	0/0:19,0:8:18.01:0,18,214	0/0:15,0:4:2.73:0,3,29	1/1:12,0:12:0.94:2,1,0	0/0:25,0:25:69.23:0,69,965	0/0:15,0:14:36.12:0,36,503	0/0:12,0:5:10.07:0,10,94	0/1:7,2:9:39.13:106,0,39	0/1:12,1:11:33.84:34,0,164	0/1:8,1:9:1.78:27,0,2	0/1:2,2:3:0.03:0,0,0	0/1:7,2:9:32.34:120,0,32	0/0:5,0:5:0:0,0,1	1/1:3,2:5:6.11:90,6,0	1/1:7,0:7:5.33:52,5,0	0/0:5,1:3:6.02:0,6,69	0/1:4,0:5:19.72:20,0,75	0/0:2,0:1:0.89:0,1,2	1/1:9,2:11:6.45:90,6,0	./.	1/1:4,2:6:5.64:89,6,0	1/1:7,9:15:8.71:299,9,0	./.	0/0:13,0:13:5.92:0,6,17	0/0:5,0:4:1.75:0,2,100	0/1:5,4:9:82.02:171,0,82	1/1:1,0:2:3.01:36,3,0
chr10	78471436	.	AGAT	A	301.63	PASS	AB=0.980;AC=15;AF=0.288;AN=52;BaseQRankSum=3.736;DP=242;FS=2.360;HRun=0;HaplotypeScore=112.9377;InbreedingCoeff=0.2674;MQ=66.29;MQ0=6;MQRankSum=-2.434;QD=4.02;ReadPosRankSum=0.709;VQSLOD=2.5006;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:43.72:0,44,929	0/0:4,1:5:5.79:0,6,106	0/0:25,0:14:28.29:0,28,529	0/1:21,0:8:14.50:15,0,86	0/0:2,4:6:3.01:0,3,53	0/0:26,0:26:66.21:0,66,1368	0/0:10,2:11:24.08:0,24,491	1/1:9,0:3:9.02:91,9,0	0/1:8,0:8:23.18:23,0,129	1/1:5,1:6:6.07:81,6,0	0/0:5,0:5:3.43:0,3,30	0/0:2,0:1:0:0,0,0	0/1:7,0:7:3.22:3,0,119	0/0:1,0:1:0:0,0,0	0/0:5,0:5:5.76:0,6,126	0/1:8,1:9:28.22:28,0,162	0/0:2,0:1:2.96:0,3,19	0/0:5,0:5:5.12:0,5,115	1/1:1,1:2:3.90:51,4,0	0/0:3,2:5:6.02:0,6,128	./.	0/0:7,0:7:7.23:0,7,132	0/0:17,0:16:25.36:0,25,462	./.	0/0:12,2:14:11.58:0,12,213	1/1:3,1:3:6.02:91,6,0	0/1:8,0:8:27.04:27,0,241	1/1:1,0:1:3.01:37,3,0
chr10	78471439	.	T	TA	259.50	PASS	AB=0.867;AC=13;AF=0.250;AN=52;BaseQRankSum=3.842;DP=230;FS=0.000;HRun=1;HaplotypeScore=100.0417;InbreedingCoeff=0.1689;MQ=67.35;MQ0=6;MQRankSum=-0.993;QD=5.09;ReadPosRankSum=-0.554;VQSLOD=0.0036;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:42.76:0,43,589	0/0:3,2:5:5.86:0,6,83	0/0:27,0:16:12.87:0,13,412	0/0:20,0:7:5.43:0,5,58	0/0:6,0:6:2.95:0,3,42	0/0:25,0:25:69.04:0,69,913	0/0:10,0:9:24.08:0,24,335	1/1:3,6:3:9.02:93,9,0	0/1:3,3:6:34.21:34,0,75	0/1:5,0:5:23.14:30,0,23	0/0:2,2:4:3.95:0,4,44	0/1:2,0:1:0:0,0,0	0/1:6,1:7:3.26:3,0,75	0/0:0,1:1:0:0,0,0	0/0:2,1:3:6.02:0,6,84	0/1:6,3:9:31.95:32,0,129	0/0:4,1:2:3.01:0,3,33	0/0:4,0:4:11.52:0,12,126	0/1:2,0:2:4.69:16,0,5	0/0:4,0:4:6.02:0,6,83	./.	0/0:7,0:7:2.24:0,2,78	0/0:16,1:16:25.57:0,26,312	./.	0/0:12,0:12:12.04:0,12,168	1/1:2,1:2:5.93:63,6,0	0/1:5,2:7:76.87:77,0,149	1/1:0,1:1:3.01:48,3,0
chr10	78471445	.	ATAAT	A	241.64	PASS	AB=0.826;AC=12;AF=0.231;AN=52;BaseQRankSum=2.791;DP=221;FS=2.589;HRun=0;HaplotypeScore=104.7338;InbreedingCoeff=0.3948;MQ=69.15;MQ0=3;MQRankSum=-4.332;QD=7.32;ReadPosRankSum=2.462;VQSLOD=2.1759;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.32:0,69,1341	0/0:5,0:5:1.45:0,1,4	0/0:23,0:16:44.46:0,44,718	0/0:14,0:8:15.07:0,15,157	0/0:6,0:6:2.04:0,2,6	0/0:23,0:23:60.14:0,60,1395	0/0:12,0:11:30.09:0,30,665	1/1:8,0:3:9.03:121,9,0	0/0:4,1:5:2.49:0,2,5	0/1:3,1:5:13.83:75,0,14	0/0:2,1:4:1.17:0,1,3	0/0:2,0:1:2.37:0,2,8	0/0:6,1:7:0.94:0,1,2	0/0:1,0:1:1.25:0,1,3	0/0:3,0:3:1.25:0,1,3	0/1:7,2:9:2.26:2,0,9	0/0:5,0:2:3.01:0,3,32	1/1:2,2:4:9.03:132,9,0	1/1:2,0:2:2.84:15,3,0	0/0:4,0:4:0.47:0,0,1	./.	0/0:6,1:7:1.54:0,2,4	0/0:16,1:16:15.80:0,16,57	./.	0/0:7,5:12:0.54:0,1,2	1/1:2,1:2:1.63:12,2,0	0/0:6,1:7:0.68:0,1,31	1/1:1,0:1:2.22:7,2,0
chr10	78471447	.	AATT	A	150.46	PASS	AB=0.854;AC=12;AF=0.231;AN=52;BaseQRankSum=3.145;DP=212;FS=1.149;HRun=0;HaplotypeScore=100.0543;InbreedingCoeff=0.3070;MQ=70.44;MQ0=2;MQRankSum=-2.045;QD=3.86;ReadPosRankSum=2.947;VQSLOD=2.0675;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:68.04:0,68,1249	0/0:3,1:4:6.76:0,7,88	0/0:21,0:17:41.25:0,41,751	0/0:12,0:8:4.71:0,5,251	0/0:6,0:6:5.38:0,5,50	0/0:22,0:22:60.20:0,60,1333	0/0:10,2:11:30.10:0,30,656	1/1:9,1:3:3.23:10,3,0	0/0:3,0:3:6.02:0,6,84	0/1:4,1:5:6.21:39,0,6	0/0:2,1:3:4.26:0,4,39	0/0:2,0:1:2.22:0,2,7	0/0:8,1:9:14.83:0,15,147	0/0:0,1:1:1.55:0,2,4	0/0:2,1:3:7.57:0,8,87	0/1:5,3:8:38.70:39,0,118	0/0:4,1:2:3.01:0,3,34	0/1:4,0:4:1.75:10,0,2	1/1:1,0:2:5.61:55,6,0	0/0:4,0:4:6.02:0,6,85	./.	0/0:6,1:7:7.83:0,8,92	0/0:16,1:16:35.33:0,35,339	./.	0/0:12,0:12:11.58:0,12,169	1/1:3,0:2:3.01:38,3,0	0/1:5,1:6:40.20:40,0,189	1/1:0,1:1:3.01:55,3,0
chr10	78471462	.	AGATG	A	146.54	PASS	AB=0.895;AC=16;AF=0.381;AN=42;BaseQRankSum=3.933;DP=195;FS=22.769;HRun=0;HaplotypeScore=89.0498;InbreedingCoeff=0.4664;MQ=70.86;MQ0=2;MQRankSum=-3.772;QD=2.53;ReadPosRankSum=0.408;VQSLOD=0.0468;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:59.84:0,60,1229	0/1:3,0:3:0:0,0,0	0/0:17,0:13:22.52:0,23,389	0/0:13,0:9:20.39:0,20,244	0/0:8,0:8:0:0,0,0	0/0:18,0:18:42.13:0,42,988	0/0:16,0:15:36.09:0,36,686	0/0:7,0:2:2.49:0,2,6	0/1:1,1:2:0:0,0,0	1/1:4,2:6:9.87:150,10,0	./.	./.	0/1:8,0:8:7.66:28,0,8	./.	0/1:1,0:1:0:0,0,0	./.	0/0:5,0:2:2.97:0,3,20	1/1:3,1:4:5.98:62,6,0	0/0:3,0:2:5.58:0,6,27	./.	./.	0/0:7,0:7:0.24:0,0,0	0/1:15,0:14:0.09:0,0,0	./.	0/1:7,5:12:0.06:0,0,0	1/1:3,0:2:1.25:3,1,0	1/1:2,1:3:0.47:1,0,0	1/1:1,0:1:2.22:7,2,0
chr10	78471532	.	ACAT	A	116.65	PASS	AB=0.888;AC=4;AF=0.118;AN=34;BaseQRankSum=4.072;DP=250;FS=0.000;HRun=0;HaplotypeScore=81.0947;InbreedingCoeff=0.0525;MQ=35.01;MQ0=13;MQRankSum=-3.387;QD=2.20;ReadPosRankSum=-0.157;VQSLOD=1.3017;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,1:29:13.81:14,0,590	./.	./.	./.	./.	0/0:22,0:22:54.16:0,54,1233	0/0:15,0:14:33.10:0,33,699	0/0:6,0:4:11.47:0,11,74	./.	0/1:5,3:8:39.20:152,0,39	./.	0/0:6,0:6:2.12:0,2,9	0/0:8,0:8:4.99:0,5,18	./.	./.	0/0:5,2:7:2.06:0,2,8	0/0:4,1:4:5.02:0,5,30	./.	./.	0/0:31,0:31:2.32:0,2,10	0/0:2,2:4:0.45:0,0,1	0/1:7,0:7:0:0,0,0	0/0:9,1:9:0.31:0,0,1	./.	0/0:9,3:11:1.62:0,2,4	0/1:7,1:8:35.98:36,0,107	0/0:4,0:2:2.60:0,3,10	0/0:3,0:3:2.04:0,2,6
chr10	78471535	.	TGATA	T	636.85	PASS	AB=0.769;AC=17;AF=0.567;AN=30;BaseQRankSum=4.558;DP=255;FS=0.000;HRun=0;HaplotypeScore=80.9607;InbreedingCoeff=0.2013;MQ=34.50;MQ0=15;MQRankSum=-5.030;QD=6.85;ReadPosRankSum=-1.146;VQSLOD=1.4376;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:11.69:0,12,301	./.	./.	./.	./.	0/0:20,0:20:48.16:0,48,1172	0/0:14,0:14:15.05:0,15,352	0/1:7,1:5:35.83:36,0,171	./.	0/1:4,3:8:44.55:248,0,45	./.	1/1:0,6:6:3.01:50,3,0	1/1:2,6:8:6.02:99,6,0	./.	./.	./.	1/1:5,0:4:2.86:16,3,0	./.	./.	1/1:9,21:31:2.61:49,3,0	1/1:2,0:4:0.47:1,0,0	./.	1/1:2,8:9:0.47:1,0,0	./.	0/0:7,5:11:0.94:0,1,2	0/1:5,4:9:43.45:194,0,43	1/1:2,1:2:3.01:51,3,0	0/0:3,0:3:2.04:0,2,6
chr10	78471552	.	GATC	G	121.25	PASS	AB=0.923;AC=11;AF=0.306;AN=36;BaseQRankSum=4.030;DP=309;FS=1.143;HRun=0;HaplotypeScore=84.2622;InbreedingCoeff=0.2398;MQ=31.38;MQ0=16;MQRankSum=-3.312;QD=1.25;ReadPosRankSum=2.431;VQSLOD=1.4484;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:15.22:0,15,273	./.	./.	./.	./.	0/0:24,0:24:44.90:0,45,1017	0/0:12,0:11:18.01:0,18,408	0/0:21,0:9:26.45:0,26,539	./.	0/1:10,0:10:98.35:98,0,158	./.	1/1:8,0:8:2.87:15,3,0	1/1:6,0:6:5.75:30,6,0	./.	./.	0/1:8,0:7:0.01:1,0,0	0/1:2,3:4:0.38:14,0,0	./.	0/0:3,0:1:3.01:0,3,58	0/1:35,0:35:5.95:6,0,54	0/1:4,1:5:0.16:1,0,0	0/1:9,0:9:0:0,0,0	0/0:10,0:9:0.31:0,0,1	./.	0/0:13,0:12:0.76:0,1,1	0/1:11,0:10:59.01:59,0,109	0/0:4,0:2:2.22:0,2,7	0/0:3,0:3:6.07:0,6,18
chr10	78471555	.	CATAG	C	607.27	PASS	AB=0.690;AC=12;AF=0.429;AN=28;BaseQRankSum=3.455;DP=319;FS=6.701;HRun=0;HaplotypeScore=83.1954;InbreedingCoeff=0.1875;MQ=31.20;MQ0=17;MQRankSum=-3.566;QD=6.33;ReadPosRankSum=-0.213;VQSLOD=1.4109;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:7.81:0,8,153	./.	./.	./.	./.	0/0:25,0:25:36.03:0,36,888	0/0:13,0:11:15.05:0,15,371	0/0:22,0:10:27.09:0,27,525	./.	0/1:8,3:11:99:145,0,153	./.	1/1:0,8:8:3.01:49,3,0	1/1:1,5:6:6.02:98,6,0	./.	./.	./.	0/0:5,0:4:3.01:0,3,43	./.	0/0:3,0:1:3.01:0,3,61	0/1:16,24:40:46.49:88,0,46	1/1:5,0:5:0.31:1,0,0	./.	./.	./.	0/1:7,6:12:0:0,0,0	0/1:5,5:9:71.94:238,0,72	./.	1/1:0,3:3:2.30:93,2,0
chr10	78471598	.	G	GATC	175.64	PASS	AB=0.986;AC=9;AF=0.250;AN=36;BaseQRankSum=1.762;DP=312;FS=0.000;HRun=0;HaplotypeScore=83.5608;InbreedingCoeff=0.1504;MQ=30.22;MQ0=15;MQRankSum=-1.762;QD=1.48;ReadPosRankSum=0.256;VQSLOD=1.5037;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:3.46:3,0,83	0/1:5,0:3:0:0,0,0	./.	./.	./.	0/0:19,0:19:8.66:0,9,153	0/0:12,0:11:12.03:0,12,204	0/0:19,0:6:15.03:0,15,197	./.	0/1:16,2:17:99:193,0,245	./.	0/0:6,0:6:0:0,0,0	./.	./.	./.	0/1:7,0:6:0.30:0,0,0	0/0:5,0:4:0:0,0,0	0/0:5,0:2:6.02:0,6,78	0/0:5,0:3:6.02:0,6,80	1/1:32,6:38:1.16:3,1,0	0/1:4,0:4:0.22:1,0,0	0/0:11,0:11:0:0,0,0	0/0:10,0:9:0.47:0,0,1	./.	0/0:13,2:14:0.94:0,1,2	0/1:14,0:14:49.23:49,0,102	./.	0/1:4,0:4:6.52:13,0,7
chr10	78471602	.	G	GATC	555.54	PASS	AB=0.833;AC=8;AF=0.222;AN=36;BaseQRankSum=-0.449;DP=302;FS=4.992;HRun=0;HaplotypeScore=80.2678;InbreedingCoeff=0.1496;MQ=30.14;MQ0=18;MQRankSum=-1.206;QD=6.86;ReadPosRankSum=0.484;VQSLOD=1.8120;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:3.89:4,0,83	0/0:7,0:5:2.20:0,2,19	./.	./.	./.	0/0:18,0:18:5.65:0,6,102	0/0:12,0:11:12.03:0,12,204	0/1:20,0:6:15.50:51,0,16	./.	0/0:16,0:15:24.38:0,24,238	./.	0/0:2,4:6:0:0,0,0	./.	./.	./.	1/1:6,0:5:0.62:2,1,0	0/0:4,0:3:0:0,0,0	1/1:5,0:2:5.95:49,6,0	0/0:5,0:3:8.86:0,9,77	0/0:31,0:31:0.47:0,0,1	0/0:4,0:4:0:0,0,0	0/0:7,4:11:0:0,0,0	0/0:7,3:9:0.47:0,0,1	./.	0/0:13,0:12:0.47:0,0,1	0/1:11,5:16:99:454,0,200	./.	0/1:1,3:4:14.31:91,0,14
chr10	78471604	.	TAGATA	T	862.71	PASS	AB=0.850;AC=10;AF=0.278;AN=36;BaseQRankSum=0.852;DP=290;FS=6.378;HRun=0;HaplotypeScore=77.8843;InbreedingCoeff=-0.0516;MQ=30.15;MQ0=17;MQRankSum=-2.245;QD=8.30;ReadPosRankSum=2.497;VQSLOD=1.1785;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:30:26.31:26,0,121	0/0:5,1:5:4.07:0,4,12	./.	0/0:8,0:1:0:0,0,0	./.	0/0:17,0:17:5.92:0,6,121	0/0:12,0:11:11.98:0,12,260	0/1:12,2:5:42:142,0,42	./.	0/1:11,5:15:99:532,0,131	./.	0/1:4,0:6:0.11:0,0,0	./.	./.	./.	1/1:4,2:5:3.35:23,3,0	0/0:4,0:3:0.47:0,0,1	0/0:5,0:2:6.02:0,6,82	0/1:4,1:3:34.85:102,0,35	0/0:17,11:31:0.47:0,0,1	0/1:3,1:4:0.39:0,0,0	./.	0/0:5,0:8:0.47:0,0,1	./.	0/0:8,5:12:0.30:0,0,1	0/1:15,0:16:57.35:57,0,271	./.	0/1:4,0:4:7.16:77,0,7
chr10	78471605	.	AGATAGATAGAT	A	95.25	PASS	AB=0.947;AC=10;AF=0.294;AN=34;BaseQRankSum=0.044;DP=288;FS=1.557;HRun=0;HaplotypeScore=85.2500;InbreedingCoeff=0.0106;MQ=30.15;MQ0=17;MQRankSum=-0.245;QD=0.72;ReadPosRankSum=-1.023;VQSLOD=1.7481;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,14:30:5.26:8,0,5	0/0:7,0:5:3.44:0,3,21	./.	0/0:8,0:1:0:0,0,0	./.	1/1:2,15:17:0.35:0,0,0	0/1:11,0:10:39.87:40,0,61	0/1:17,0:5:7.97:33,0,8	./.	0/1:15,0:14:59.74:60,0,160	./.	./.	./.	./.	./.	1/1:6,0:5:3.36:26,3,0	0/0:4,0:3:0.47:0,0,1	0/0:5,0:2:6:0,6,52	0/1:5,0:3:20.03:20,0,44	0/1:31,0:31:0.08:0,0,0	0/0:4,0:4:0:0,0,0	./.	0/0:9,0:8:0.47:0,0,1	./.	0/0:13,0:12:0.47:0,0,1	0/0:15,0:16:3.25:0,3,382	./.	0/0:4,0:4:4.96:0,5,15
chr10	78471608	.	TA	T	312.63	PASS	AB=0.939;AC=10;AF=0.294;AN=34;BaseQRankSum=3.389;DP=290;FS=0.000;HRun=1;HaplotypeScore=75.1997;InbreedingCoeff=-0.0049;MQ=30.01;MQ0=18;MQRankSum=-1.153;QD=3.47;ReadPosRankSum=0.763;VQSLOD=-0.1571;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,1:27:9.66:10,0,63	0/0:5,2:5:0:0,0,0	./.	./.	./.	0/0:17,0:17:6.01:0,6,94	0/0:12,0:11:11.99:0,12,188	0/1:18,0:5:10.84:11,0,49	./.	0/1:9,6:14:99:277,0,102	./.	0/1:6,0:6:0.11:0,0,0	./.	./.	./.	1/1:4,2:5:3.77:23,4,0	0/0:3,1:3:0.47:0,0,1	0/1:5,0:2:22.97:31,0,23	0/1:4,1:3:34.88:54,0,35	0/0:28,2:30:0.47:0,0,1	0/1:4,0:4:0.34:0,0,0	./.	0/0:9,0:8:0.47:0,0,1	./.	0/0:13,0:12:0.29:0,0,1	0/0:17,0:17:33.84:0,34,380	./.	0/1:4,0:4:0.88:1,0,19
chr10	78471613	.	AGAT	A	457.74	PASS	AB=0.981;AC=14;AF=0.412;AN=34;BaseQRankSum=-1.883;DP=266;FS=1.595;HRun=0;HaplotypeScore=70.1311;InbreedingCoeff=-0.0503;MQ=29.69;MQ0=15;MQRankSum=-0.862;QD=3.32;ReadPosRankSum=0.479;VQSLOD=1.3901;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:24:3.24:17,3,0	0/0:4,2:4:0.94:0,1,2	./.	0/0:6,0:1:0:0,0,0	./.	0/1:15,0:15:0:0,0,0	0/1:9,1:9:12.87:83,0,13	0/1:14,0:3:8.12:39,0,8	./.	0/1:15,0:14:73.05:73,0,138	./.	./.	./.	./.	./.	1/1:5,1:5:3.88:27,4,0	0/0:4,0:3:0.47:0,0,1	0/1:5,0:2:28.05:29,0,28	0/0:5,0:3:7.89:0,8,58	1/1:25,0:25:0.38:1,0,0	0/1:4,0:4:0.19:0,0,0	./.	0/0:11,1:11:0.44:0,0,1	./.	0/0:9,1:9:0:0,0,0	0/1:15,1:16:99:215,0,152	./.	0/1:4,0:4:2.82:66,0,3
chr10	78471616	.	T	TA	717.05	PASS	AB=0.699;AC=16;AF=0.533;AN=30;BaseQRankSum=-1.802;DP=249;FS=6.663;HRun=1;HaplotypeScore=62.9478;InbreedingCoeff=-0.0289;MQ=29.73;MQ0=15;MQRankSum=-0.203;QD=5.20;ReadPosRankSum=1.158;VQSLOD=0.4357;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,2:22:3.41:49,3,0	0/1:4,2:4:0:0,0,0	./.	./.	./.	0/1:15,0:15:0.08:0,0,0	1/1:2,8:9:9.50:136,10,0	0/1:4,10:3:8.14:38,0,8	./.	0/1:9,5:13:69.06:187,0,69	./.	./.	./.	./.	./.	1/1:3,2:4:3:26,3,0	0/0:1,3:3:0.41:0,0,1	0/1:2,3:2:19.31:42,0,19	0/0:5,0:3:2.10:0,2,46	1/1:12,9:21:0.47:1,0,0	0/1:1,0:4:0.01:0,0,1	./.	0/0:7,5:11:0.47:0,0,1	./.	./.	0/1:12,6:18:99:265,0,152	./.	0/1:1,3:4:0.95:63,0,1
chr10	78471623	.	TA	T	525.18	PASS	AB=0.787;AC=12;AF=0.300;AN=40;BaseQRankSum=0.966;DP=252;FS=8.138;HRun=1;HaplotypeScore=65.6460;InbreedingCoeff=0.0794;MQ=30.52;MQ0=15;MQRankSum=-1.140;QD=5.25;ReadPosRankSum=2.115;VQSLOD=0.3321;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:9.54:0,10,116	0/0:6,0:4:0:0,0,0	0/0:6,0:2:6.02:0,6,88	./.	./.	0/0:17,0:17:6.01:0,6,88	0/0:9,0:9:9.50:0,10,140	1/1:4,9:1:3.01:42,3,0	./.	0/1:12,3:13:77.45:103,0,77	./.	0/0:1,2:3:0:0,0,0	./.	0/1:3,1:2:0:0,0,0	./.	0/0:4,0:3:2.34:0,2,35	0/0:2,1:3:0.47:0,0,1	0/1:5,0:2:10.57:11,0,39	0/1:4,0:3:16.56:17,0,84	1/1:18,5:23:1.98:7,2,0	0/1:4,0:4:0.01:0,0,0	./.	0/1:2,7:8:0:0,0,0	./.	0/0:7,1:8:2.50:0,2,9	0/1:6,12:18:99:410,0,156	0/0:5,0:2:0:0,0,0	0/1:0,5:5:3.90:36,0,4
chr10	78471628	.	AGAT	A	433.90	PASS	AB=0.921;AC=12;AF=0.300;AN=40;BaseQRankSum=3.682;DP=242;FS=10.792;HRun=0;HaplotypeScore=63.8848;InbreedingCoeff=0.2156;MQ=30.91;MQ0=12;MQRankSum=-3.095;QD=5.17;ReadPosRankSum=3.000;VQSLOD=0.7482;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:8.34:0,8,120	0/0:5,1:4:0.94:0,1,2	0/0:10,0:3:9.02:0,9,113	0/0:7,0:1:0:0,0,0	./.	0/0:17,0:17:8.77:0,9,126	0/0:11,1:11:15.04:0,15,207	1/1:12,0:1:2.68:11,3,0	./.	0/1:10,4:12:78.80:316,0,79	./.	./.	./.	0/0:4,0:2:0.89:0,1,2	./.	1/1:3,1:3:3.89:29,4,0	0/1:3,0:3:0.02:0,0,0	0/0:5,0:2:3.01:0,3,53	0/1:2,1:3:34.89:43,0,35	1/1:14,6:20:1.72:5,2,0	0/1:4,0:4:0.21:0,0,0	./.	0/1:9,0:8:0:0,0,0	./.	0/0:4,2:6:2.04:0,2,6	0/1:15,0:15:99:131,0,207	0/0:3,0:2:0:0,0,0	0/0:5,0:5:8.20:0,8,60
chr10	78471631	.	T	TA	608.94	PASS	AB=0.709;AC=8;AF=0.235;AN=34;BaseQRankSum=3.849;DP=229;FS=10.635;HRun=1;HaplotypeScore=55.7651;InbreedingCoeff=0.1241;MQ=35.26;MQ0=12;MQRankSum=-2.980;QD=13.24;ReadPosRankSum=3.586;VQSLOD=1.6013;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:19:8.97:0,9,98	0/1:3,2:4:0:0,0,0	0/0:12,0:4:9.02:0,9,113	0/0:9,0:2:0:0,0,0	./.	0/0:16,0:16:8.87:0,9,126	0/0:12,0:11:15.33:0,15,191	0/0:11,1:1:2.99:0,3,24	./.	0/1:7,7:11:50.44:304,0,50	./.	./.	./.	0/1:2,1:1:0:0,0,0	./.	1/1:2,2:3:3.01:41,3,0	./.	0/0:2,1:2:3.01:0,3,35	0/1:2,0:2:25.59:26,0,32	0/0:12,8:20:0.25:0,0,2	./.	./.	./.	./.	0/0:4,2:6:1.55:0,2,4	0/1:6,9:15:99:330,0,161	0/1:0,3:2:0:0,0,0	0/0:3,2:5:4.74:0,5,64
chr10	78471663	.	AT	A	5089.34	PASS	AB=0.506;AC=39;AF=0.750;AN=52;BaseQRankSum=7.723;DP=342;FS=42.432;HRun=1;HaplotypeScore=102.2017;InbreedingCoeff=0.7060;MQ=52.88;MQ0=3;MQRankSum=-5.143;QD=20.04;ReadPosRankSum=2.171;VQSLOD=2.5550;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:32.86:0,33,527	1/1:0,6:6:12.04:167,12,0	0/0:26,0:18:48.16:0,48,751	0/0:6,0:4:8.70:0,9,134	1/1:0,26:26:24.08:336,24,0	0/0:12,0:12:26.96:0,27,386	0/0:15,0:14:30.57:0,31,481	1/1:0,10:6:15.05:210,15,0	1/1:1,1:4:5.83:34,6,0	1/1:0,21:19:54.18:754,54,0	1/1:0,16:16:2.77:42,3,0	1/1:0,11:11:21.07:293,21,0	1/1:0,13:13:20.83:293,21,0	0/1:0,1:3:0.02:0,0,0	1/1:1,3:4:1.55:4,2,0	1/1:0,9:9:19.83:255,20,0	./.	1/1:0,10:10:24.08:335,24,0	1/1:0,3:2:6.02:84,6,0	1/1:0,19:19:14.15:175,14,0	0/1:0,7:7:0:0,0,0	0/1:1,13:15:4.46:37,0,4	1/1:0,16:16:9.92:128,10,0	./.	1/1:0,11:11:11.17:243,11,0	1/1:0,33:32:96.30:1324,96,0	1/1:0,12:11:17.70:251,18,0	1/1:0,3:3:9.03:125,9,0
chr10	78471668	.	G	GGATA	658.94	PASS	AB=1.000;AC=20;AF=0.385;AN=52;BaseQRankSum=2.811;DP=373;FS=39.463;HRun=0;HaplotypeScore=141.9031;InbreedingCoeff=0.0565;MQ=50.11;MQ0=3;MQRankSum=-2.265;QD=2.83;ReadPosRankSum=-1.633;VQSLOD=0.8254;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:26.89:0,27,364	0/1:6,0:6:4.67:63,0,5	0/0:24,0:19:32.69:0,33,455	0/0:5,0:3:9.03:0,9,148	0/1:27,0:27:20.39:20,0,21	0/0:12,0:12:24.04:0,24,380	0/0:14,0:13:27.08:0,27,431	1/1:16,0:12:2.49:123,2,0	1/1:7,1:6:8.86:95,9,0	0/1:23,0:21:51.76:101,0,52	1/1:18,0:18:2.77:15,3,0	0/1:12,0:12:23.08:24,0,23	0/1:15,0:14:5.61:6,0,16	1/1:3,1:4:5.88:53,6,0	./.	0/1:12,0:12:35.83:36,0,38	0/0:1,1:2:0:0,0,0	0/0:10,0:10:27.95:0,28,131	0/0:5,0:3:5.53:0,6,27	0/1:20,0:20:18.79:22,0,19	0/0:7,0:7:0:0,0,0	1/1:15,0:15:2.34:33,2,0	0/1:18,0:18:2.50:39,0,2	./.	0/0:14,0:14:3.70:0,4,22	0/1:35,0:34:99:149,0,192	0/0:12,0:11:7.27:0,7,23	0/1:4,0:4:18.62:30,0,19
chr10	78471733	.	T	TGATA	905.92	PASS	AB=0.873;AC=25;AF=0.543;AN=46;BaseQRankSum=3.652;DP=421;FS=23.432;HRun=0;HaplotypeScore=128.4211;InbreedingCoeff=0.3364;MQ=35.94;MQ0=10;MQRankSum=-3.195;QD=4.53;ReadPosRankSum=1.807;VQSLOD=1.0342;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:27.56:0,28,451	1/1:4,1:5:2.99:24,3,0	0/0:27,0:4:1.55:0,2,4	./.	./.	0/0:25,0:25:57.19:0,57,940	0/0:12,0:12:27.09:0,27,450	0/1:40,2:27:99:133,0,460	1/1:17,0:15:2.95:19,3,0	0/1:9,4:10:72.88:192,0,73	1/1:13,5:18:0.47:1,0,0	0/0:26,0:25:17.98:0,18,299	0/0:23,0:22:8.97:0,9,149	1/1:11,0:9:8.87:56,9,0	1/1:13,0:7:8.85:55,9,0	./.	1/1:5,0:5:5.49:23,5,0	0/1:13,0:12:24.98:25,0,33	0/1:6,2:5:83.98:136,0,84	1/1:12,1:14:2.99:24,3,0	./.	0/0:11,0:10:6.02:0,6,100	0/0:12,0:11:6.02:0,6,100	./.	0/1:9,2:11:0:0,0,0	1/1:16,0:16:6.02:104,6,0	1/1:7,1:9:3.01:73,3,0	1/1:3,1:4:9.03:190,9,0
chr10	78471750	.	GATC	G	415.98	PASS	AB=0.901;AC=19;AF=0.413;AN=46;BaseQRankSum=3.346;DP=382;FS=37.939;HRun=0;HaplotypeScore=99.8624;InbreedingCoeff=0.2851;MQ=33.37;MQ0=15;MQRankSum=-2.337;QD=2.52;ReadPosRankSum=-0.683;VQSLOD=0.0683;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:26.93:0,27,623	1/1:5,1:6:2.99:24,3,0	0/0:26,0:2:5.82:0,6,34	./.	./.	0/0:27,0:27:63.18:0,63,1404	0/0:14,0:14:39.13:0,39,868	0/1:31,0:18:0.58:1,0,641	1/1:10,8:16:6:76,6,0	0/1:12,3:10:96.44:96,0,144	0/1:16,1:14:0:0,0,0	0/0:21,0:20:17.36:0,17,376	0/0:17,0:16:8.66:0,9,166	0/0:7,5:10:0.53:0,1,2	1/1:12,1:7:5.49:95,5,0	./.	0/0:4,0:4:4.58:0,5,16	0/1:7,0:6:24.93:25,0,31	0/1:9,0:7:7.29:7,0,129	1/1:5,4:8:2.99:24,3,0	./.	0/0:9,0:8:6.02:0,6,137	0/0:10,0:9:6.02:0,6,120	./.	0/1:9,3:10:0.01:0,0,0	0/1:5,3:8:50.71:87,0,51	1/1:12,2:12:3.01:34,3,0	1/1:4,2:6:8.68:85,9,0
chr10	78471764	.	A	AGAT	1025.20	PASS	AB=0.917;AC=21;AF=0.438;AN=48;BaseQRankSum=3.351;DP=384;FS=20.761;HRun=0;HaplotypeScore=89.1514;InbreedingCoeff=0.3329;MQ=36.09;MQ0=12;MQRankSum=-1.763;QD=6.57;ReadPosRankSum=-0.416;VQSLOD=1.0758;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:34.41:0,34,519	0/1:5,1:5:0:0,0,0	0/0:26,0:3:5.06:0,5,15	0/0:25,0:5:6.02:0,6,78	./.	0/0:22,0:22:51.59:0,52,825	0/0:14,0:13:33.11:0,33,542	0/0:22,0:12:30.04:0,30,407	0/0:22,0:20:2.79:0,3,29	0/1:15,2:12:99:211,0,243	./.	1/1:17,1:16:11.86:242,12,0	1/1:8,3:11:6.02:136,6,0	0/0:15,0:13:9.01:0,9,87	0/0:15,0:9:11.86:0,12,130	1/1:10,1:11:2.37:8,2,0	0/0:4,0:4:5.85:0,6,72	1/1:8,0:8:6.27:103,6,0	0/1:8,2:7:75.29:188,0,75	0/1:8,1:8:0:0,0,0	./.	1/1:6,1:6:6.02:110,6,0	1/1:6,2:6:2.99:24,3,0	./.	0/1:13,1:11:0.09:0,0,0	0/1:16,0:16:82.77:83,0,350	1/1:13,0:10:3.01:35,3,0	0/1:7,0:7:32.65:33,0,38
chr10	78471784	.	G	GATC	566.88	PASS	AB=0.967;AC=16;AF=0.333;AN=48;BaseQRankSum=4.155;DP=358;FS=3.563;HRun=0;HaplotypeScore=104.4416;InbreedingCoeff=0.1878;MQ=36.28;MQ0=9;MQRankSum=-3.535;QD=3.61;ReadPosRankSum=-2.115;VQSLOD=1.5298;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:19.57:0,20,437	0/1:6,0:5:0:0,0,0	0/0:21,0:6:12.51:0,13,205	0/0:15,0:6:9.03:0,9,153	./.	0/0:25,0:24:54.14:0,54,887	0/0:12,0:11:30.10:0,30,512	0/1:12,0:12:43.63:44,0,294	1/1:18,0:17:1.71:6,2,0	0/1:16,2:14:99:313,0,278	./.	0/0:13,0:11:9.11:0,9,61	1/1:10,0:10:9:81,9,0	0/0:14,0:14:6.02:0,6,87	0/1:14,0:8:0:0,0,0	1/1:10,1:11:6.02:131,6,0	0/0:2,0:2:2.84:0,3,14	0/1:10,1:10:62.63:63,0,95	0/1:7,0:5:30.97:31,0,51	0/0:6,2:8:0:0,0,0	./.	0/0:6,0:5:1.55:0,2,4	0/1:7,0:5:0:0,0,0	0/1:6,0:5:0:0,0,0	0/1:14,3:14:0:0,0,0	0/1:20,0:19:21.33:21,0,393	./.	0/0:9,0:9:3.48:0,3,51
chr10	78471786	.	TA	T	295.88	PASS	AB=0.845;AC=13;AF=0.310;AN=42;BaseQRankSum=6.340;DP=353;FS=0.902;HRun=3;HaplotypeScore=97.0399;InbreedingCoeff=0.3205;MQ=36.24;MQ0=10;MQRankSum=-4.307;QD=2.77;ReadPosRankSum=1.886;VQSLOD=0.0490;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:16.39:0,16,366	0/1:5,1:5:0:0,0,0	0/0:20,0:6:12:0,12,166	0/0:16,1:6:8.97:0,9,121	./.	0/0:25,0:24:57.65:0,58,802	0/0:12,0:11:33.07:0,33,451	0/0:13,0:13:9.53:0,10,102	1/1:16,1:16:0.88:2,1,0	0/1:15,3:14:47.73:48,0,65	./.	0/0:13,0:11:6.87:0,7,30	1/1:9,0:9:9.25:30,9,0	0/0:12,2:14:5.91:0,6,44	./.	1/1:7,3:10:6.02:64,6,0	0/0:2,0:2:2.04:0,2,6	0/1:7,1:10:11.22:11,0,29	0/1:7,0:4:1.03:1,0,20	./.	./.	0/0:6,0:5:0.19:0,0,1	0/0:7,0:5:0:0,0,0	0/0:5,1:5:0:0,0,0	./.	0/1:15,6:20:26.02:207,0,26	./.	1/1:4,4:8:7.42:52,7,0
chr10	78471790	.	TA	T	1013.52	PASS	AB=0.758;AC=13;AF=0.283;AN=46;BaseQRankSum=4.806;DP=372;FS=12.120;HRun=3;HaplotypeScore=106.9374;InbreedingCoeff=0.1859;MQ=36.20;MQ0=9;MQRankSum=-5.447;QD=9.13;ReadPosRankSum=3.795;VQSLOD=0.2802;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:31.39:0,31,466	0/0:4,3:6:2.85:0,3,43	0/0:19,0:6:12.51:0,13,193	0/0:17,0:6:14.45:0,14,156	./.	0/0:24,0:23:54.18:0,54,853	0/0:12,0:11:33.10:0,33,497	0/1:5,7:12:99:257,0,134	0/0:17,0:17:5.67:0,6,34	0/1:10,8:14:99:224,0,135	./.	0/0:8,4:10:3.92:0,4,11	1/1:6,3:9:10.27:127,10,0	0/0:12,1:13:2.96:0,3,31	0/0:17,0:11:9:0,9,95	1/1:6,4:10:1.02:7,1,0	0/0:2,0:2:2.98:0,3,22	0/1:11,1:11:66.45:98,0,66	0/1:9,2:8:29.90:30,0,92	./.	./.	0/0:4,2:5:0.19:0,0,1	0/0:3,4:5:0:0,0,0	1/1:5,3:7:4.29:24,4,0	./.	0/1:13,10:22:99:295,0,170	0/0:11,9:16:5.80:0,6,64	1/1:4,4:8:8.39:86,8,0
chr10	78471800	.	GATC	G	220.65	PASS	AB=0.792;AC=14;AF=0.280;AN=50;BaseQRankSum=3.874;DP=378;FS=2.190;HRun=0;HaplotypeScore=121.3305;InbreedingCoeff=0.1861;MQ=36.48;MQ0=10;MQRankSum=-2.572;QD=1.49;ReadPosRankSum=0.236;VQSLOD=2.2944;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,5:24:16.48:16,0,488	0/0:9,0:8:6.58:0,7,36	0/0:13,0:5:8.69:0,9,186	0/0:14,0:6:13.97:0,14,181	./.	0/0:19,0:18:41.65:0,42,566	0/0:12,0:11:26.40:0,26,415	0/0:16,0:15:45.15:0,45,746	0/0:12,8:20:11.02:0,11,66	0/1:15,3:14:51.39:51,0,430	./.	0/0:13,0:11:8.40:0,8,60	0/0:14,1:14:3.17:0,3,108	0/1:4,8:12:0.05:0,0,0	0/0:11,4:13:11.70:0,12,69	1/1:7,2:9:6.02:92,6,0	0/1:4,1:5:16.52:43,0,17	0/1:10,2:11:40.45:40,0,157	0/1:9,2:8:69.32:69,0,153	0/1:7,3:9:0:0,0,0	./.	0/0:7,0:6:5.82:0,6,33	1/1:7,0:6:1.55:4,2,0	0/0:8,0:7:0.68:0,1,64	0/1:13,7:17:0:0,0,0	0/0:26,0:25:65.87:0,66,1201	1/1:14,5:15:5.77:33,6,0	0/0:9,0:8:9.03:0,9,142
chr10	78471803	.	CATAG	C	1261.59	PASS	AB=0.939;AC=29;AF=0.725;AN=40;BaseQRankSum=-2.414;DP=382;FS=24.266;HRun=0;HaplotypeScore=119.9907;InbreedingCoeff=0.3928;MQ=36.65;MQ0=10;MQRankSum=2.646;QD=5.11;ReadPosRankSum=0.773;VQSLOD=0.2942;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,1:26:68.17:68,0,266	1/1:5,3:7:5.04:90,5,0	./.	./.	./.	1/1:10,9:18:21.07:319,21,0	1/1:7,5:11:9.03:136,9,0	./.	1/1:14,4:18:9.02:136,9,0	1/1:18,0:14:6:53,6,0	./.	0/0:14,0:12:8.87:0,9,63	0/0:14,0:13:24.05:0,24,264	1/1:11,0:13:1.48:4,1,0	1/1:8,7:13:12.03:182,12,0	1/1:8,0:8:9:81,9,0	1/1:4,1:5:5.70:91,6,0	1/1:12,0:10:1.04:3,1,0	1/1:13,0:10:11.99:105,12,0	./.	./.	0/0:7,0:6:6.15:0,6,39	1/1:8,0:6:1.45:4,1,0	0/0:8,0:7:0.68:0,1,45	0/1:22,0:20:2.07:2,0,4	0/1:25,2:26:52.11:52,0,618	1/1:18,0:16:9.93:67,10,0	./.
chr10	78471811	.	G	GATC	973.77	PASS	AB=0.962;AC=20;AF=0.385;AN=52;BaseQRankSum=0.854;DP=396;FS=9.616;HRun=0;HaplotypeScore=125.6067;InbreedingCoeff=0.3039;MQ=36.45;MQ0=9;MQRankSum=-1.315;QD=4.89;ReadPosRankSum=-4.601;VQSLOD=-0.6111;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:28.02:0,28,410	0/0:10,0:9:8.43:0,8,99	0/0:5,0:3:3.01:0,3,43	0/0:8,0:1:2.80:0,3,13	./.	0/0:18,0:17:42.08:0,42,535	0/0:12,0:11:24:0,24,295	0/0:15,0:14:42.01:0,42,593	0/1:19,0:19:0.51:1,0,133	0/1:16,0:13:99:149,0,360	./.	0/1:15,0:13:0.83:1,0,3	0/1:15,0:14:4.25:4,0,40	0/1:11,3:14:0:0,0,0	0/0:18,0:16:15.02:0,15,156	1/1:8,1:9:12.03:177,12,0	0/0:8,0:8:14.77:0,15,189	0/1:12,2:12:99:99,0,132	0/1:15,0:13:99:245,0,148	1/1:14,1:14:11.96:194,12,0	1/1:7,0:6:3.01:63,3,0	1/1:8,0:7:2.58:27,3,0	0/0:13,0:11:5.61:0,6,99	0/0:10,0:9:5.89:0,6,100	1/1:19,3:18:3.01:56,3,0	0/0:26,0:25:62.13:0,62,826	1/1:18,2:16:8.99:99,9,0	0/1:9,0:8:11.86:12,0,12
chr10	78471815	.	G	GATAGATC	1187.82	PASS	AB=0.953;AC=17;AF=0.327;AN=52;BaseQRankSum=5.975;DP=416;FS=6.673;HRun=0;HaplotypeScore=150.3104;InbreedingCoeff=0.1210;MQ=35.71;MQ0=9;MQRankSum=-5.322;QD=5.82;ReadPosRankSum=4.047;VQSLOD=2.0816;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:27.60:0,28,536	0/0:12,0:11:12.39:0,12,211	./.	./.	0/0:16,0:15:3.01:0,3,51	0/0:18,0:17:38.90:0,39,694	0/0:12,0:11:21.07:0,21,366	0/1:18,0:17:19.27:19,0,479	0/0:22,0:22:5.06:0,5,356	0/1:18,0:16:68.61:406,0,69	0/0:18,0:14:6.01:0,6,76	0/1:6,7:14:0:0,0,0	1/1:6,9:15:12.51:441,13,0	0/0:15,0:15:2.99:0,3,51	0/0:18,0:17:18.06:0,18,325	1/1:11,0:11:3.27:115,3,0	0/0:8,0:8:17.98:0,18,270	0/1:14,0:12:50.12:61,0,50	0/1:16,0:14:45.26:45,0,273	0/1:17,0:16:46.15:46,0,119	0/0:7,0:6:5.38:0,5,59	0/0:5,3:7:3.01:0,3,44	1/1:13,0:11:5.89:39,6,0	1/1:10,0:9:6.36:39,6,0	0/0:25,0:21:5.85:0,6,64	0/1:24,0:24:99:120,0,813	0/1:20,0:16:1.40:1,0,11	0/1:9,0:8:1.18:1,0,47
chr10	78471819	.	G	GATC	754.33	PASS	AB=0.981;AC=12;AF=0.231;AN=52;BaseQRankSum=6.119;DP=426;FS=3.922;HRun=0;HaplotypeScore=144.1713;InbreedingCoeff=0.0721;MQ=36.47;MQ0=12;MQRankSum=-5.655;QD=4.90;ReadPosRankSum=1.606;VQSLOD=2.8383;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:27.24:0,27,436	0/0:12,0:11:15.93:0,16,215	./.	./.	0/0:19,0:18:9.03:0,9,145	0/0:18,0:17:39.10:0,39,513	0/0:13,0:12:24.05:0,24,311	0/1:18,0:16:19.33:19,0,564	0/0:22,0:22:2.03:0,2,224	0/1:16,1:15:99:275,0,292	0/0:15,3:14:6.02:0,6,102	0/1:16,1:15:0.83:1,0,3	0/1:16,0:15:27.54:161,0,28	0/0:15,0:15:3.01:0,3,51	0/0:19,0:18:18.04:0,18,219	0/1:11,0:11:5.94:6,0,58	0/0:9,0:9:18.05:0,18,255	0/1:14,0:12:38.44:38,0,191	0/0:18,0:14:30.80:0,31,452	0/0:18,1:18:20.43:0,20,298	0/0:7,0:6:6.02:0,6,95	0/0:9,0:8:3.62:0,4,74	1/1:10,4:12:9.02:157,9,0	1/1:5,5:9:6.02:131,6,0	0/0:24,1:21:6.02:0,6,102	0/1:25,1:25:99:101,0,622	0/0:18,2:16:9.02:0,9,102	0/1:11,0:10:0.28:0,0,87
chr10	78472069	.	TG	T	3490.48	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.590;DP=681;FS=0.845;HRun=3;HaplotypeScore=67.2547;InbreedingCoeff=0.9977;MQ=86.22;MQ0=0;MQRankSum=0.704;QD=34.56;ReadPosRankSum=2.169;VQSLOD=4.2835;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,151,2154	0/0:9,0:9:18.05:0,18,241	0/0:24,0:24:63.21:0,63,893	0/0:24,0:24:71.97:0,72,940	0/0:24,0:23:57.19:0,57,819	0/0:24,0:24:69.22:0,69,975	0/0:26,0:26:78.26:0,78,1121	0/0:22,0:22:63.21:0,63,904	1/1:1,21:22:57.18:707,57,0	0/0:25,0:23:63.20:0,63,875	0/0:17,0:16:39.12:0,39,543	0/0:28,0:28:84.28:0,84,1209	0/0:24,0:24:72.24:0,72,1037	1/1:0,24:24:72.23:893,72,0	1/1:1,27:28:81.25:999,81,0	0/0:25,0:25:72.23:0,72,1018	1/1:1,26:27:72.23:893,72,0	0/0:15,0:15:45.15:0,45,648	0/0:17,0:17:48.16:0,48,691	0/0:27,0:26:72.23:0,72,1018	0/0:33,0:33:90.29:0,90,1275	0/0:18,0:18:42.06:0,42,558	0/0:22,0:21:48.16:0,48,691	0/0:26,0:26:78.22:0,78,1100	0/0:19,0:18:42.12:0,42,585	0/0:30,0:30:87.29:0,87,1252	0/0:31,0:31:93.31:0,93,1328	0/0:19,0:18:42.14:0,42,605
chr10	78472370	.	TA	T	11054.15	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=5.869;DP=505;FS=0.000;HRun=7;HaplotypeScore=56.5051;InbreedingCoeff=0.9686;MQ=69.73;MQ0=0;MQRankSum=-2.453;QD=25.89;ReadPosRankSum=2.465;VQSLOD=5.3108;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:36.11:0,36,452	1/1:1,8:9:21.05:214,21,0	0/0:17,0:13:7.08:0,7,173	0/0:14,0:9:13.25:0,13,134	1/1:6,22:28:66.04:648,66,0	0/0:22,0:22:57.14:0,57,679	0/0:11,0:11:33.07:0,33,388	1/1:5,34:39:99:994,102,0	1/1:0,8:8:21.05:214,21,0	1/1:1,19:20:57.12:581,57,0	1/1:2,9:11:27.06:275,27,0	1/1:2,13:15:39.09:398,39,0	1/1:0,10:10:27.06:275,27,0	1/1:1,18:19:51.12:520,51,0	1/1:3,17:20:51.11:520,51,0	1/1:2,20:22:53.95:550,54,0	1/1:1,23:24:69.15:703,69,0	1/1:4,11:15:30.05:299,30,0	1/1:3,25:28:75.16:760,75,0	1/1:0,27:27:69.08:688,69,0	1/1:0,7:7:18.04:183,18,0	1/1:3,16:19:45.01:435,45,0	1/1:1,21:22:60.13:611,60,0	1/1:1,12:13:33.07:336,33,0	1/1:1,14:15:42.09:428,42,0	1/1:5,24:29:72.11:719,72,0	1/1:1,17:18:48.11:489,48,0	1/1:2,7:9:21.03:213,21,0
chr10	78472718	.	TGTTTGGAATGG	T	25633.19	PASS	AB=0.567;AC=37;AF=0.661;AN=56;BaseQRankSum=13.912;DP=637;FS=10.055;HRun=0;HaplotypeScore=299.6601;InbreedingCoeff=0.9126;MQ=85.25;MQ0=0;MQRankSum=-17.418;QD=63.14;ReadPosRankSum=3.755;VQSLOD=3.4949;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.33:0,96,4942	1/1:1,6:6:15.05:519,15,0	0/0:28,0:28:78.23:0,78,3583	0/0:28,0:28:66.77:0,67,3121	1/1:6,17:23:36.06:1159,36,0	0/0:22,0:22:60.21:0,60,3285	0/0:33,0:33:99:0,99,5044	1/1:6,19:25:57.06:1493,57,0	0/0:24,0:24:69.22:0,69,3725	1/1:4,19:23:51.14:1552,51,0	1/1:2,11:13:27.09:934,27,0	1/1:6,19:25:54.19:1869,54,0	1/1:4,24:28:63.22:2181,63,0	0/0:25,0:25:72.25:0,72,4068	0/0:23,0:23:63.21:0,63,3158	1/1:3,28:31:57.20:1973,57,0	0/0:16,0:16:48.16:0,48,2623	1/1:0,10:10:18.03:541,18,0	1/1:10,23:33:69.05:1779,69,0	1/1:2,21:23:48.16:1662,48,0	1/1:8,18:26:17.94:621,18,0	1/1:2,15:17:42.10:1370,42,0	1/1:0,10:10:24.08:831,24,0	1/1:5,17:22:36.12:1244,36,0	1/1:1,16:17:30.10:1039,30,0	0/1:8,26:34:95.19:1960,0,95	1/1:9,25:33:69.24:2388,69,0	1/1:0,5:5:15.05:520,15,0
chr10	78474938	.	CTGAT	C	15033.77	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=13.310;DP=518;FS=4.444;HRun=0;HaplotypeScore=152.4749;InbreedingCoeff=0.9624;MQ=82.02;MQ0=0;MQRankSum=-14.086;QD=42.23;ReadPosRankSum=0.055;VQSLOD=5.2905;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.20:0,57,1505	1/1:1,13:14:27.09:503,27,0	0/0:19,0:19:54.19:0,54,1420	0/0:21,0:21:50.19:0,50,1218	1/1:2,26:28:57.04:954,57,0	0/0:17,0:17:51.18:0,51,1321	0/0:16,0:16:48.16:0,48,1233	1/1:6,27:33:81.21:1327,81,0	0/0:17,0:17:45.15:0,45,1192	1/1:3,30:33:90.20:1518,90,0	1/1:0,23:23:69.13:1253,69,0	1/1:1,17:18:48.16:906,48,0	1/1:3,18:21:48.16:876,48,0	0/0:12,0:12:33.11:0,33,847	0/0:26,0:25:75.24:0,75,1951	1/1:2,19:21:54.03:1014,54,0	0/0:14,0:14:36.09:0,36,856	1/1:3,8:11:12.51:228,13,0	1/1:7,13:20:39.09:610,39,0	1/1:0,21:21:48.16:872,48,0	1/1:2,4:6:6.02:94,6,0	1/1:0,7:7:21.07:396,21,0	1/1:0,16:16:48.16:906,48,0	1/1:2,3:5:6.02:113,6,0	1/1:2,18:20:42.14:788,42,0	1/1:3,19:22:57.03:887,57,0	1/1:1,24:25:66.23:1234,66,0	1/1:0,12:12:30.10:555,30,0
chr10	78475667	.	T	TG	17973.06	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=13.960;DP=618;FS=0.760;HRun=3;HaplotypeScore=135.6363;InbreedingCoeff=0.9993;MQ=83.28;MQ0=0;MQRankSum=-4.801;QD=37.13;ReadPosRankSum=2.444;VQSLOD=4.0088;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1389	1/1:0,9:9:27.09:378,27,0	0/0:25,0:25:66.17:0,66,767	0/0:23,0:23:65.08:0,65,748	1/1:1,27:28:66.20:905,66,0	0/0:28,0:28:75.23:0,75,900	0/0:18,0:18:51.14:0,51,599	1/1:4,30:34:90.22:1235,90,0	1/1:1,20:21:57.19:798,57,0	1/1:2,28:30:84.26:1141,84,0	1/1:0,13:13:35.66:504,36,0	1/1:4,24:28:63.21:882,63,0	1/1:3,21:24:57.19:798,57,0	1/1:2,17:19:48.14:654,48,0	1/1:1,22:23:69.22:950,69,0	1/1:2,22:24:66.22:924,66,0	1/1:0,23:23:63.21:879,63,0	1/1:0,10:10:30.07:399,30,0	1/1:4,16:20:48.16:672,48,0	1/1:0,13:13:36.12:501,36,0	1/1:0,22:22:60.20:840,60,0	1/1:0,9:9:27.09:378,27,0	1/1:0,13:13:39.13:545,39,0	1/1:0,25:25:66.22:924,66,0	1/1:0,20:20:54.18:756,54,0	1/1:0,23:23:69.21:947,69,0	1/1:6,29:35:87.29:1207,87,0	1/1:0,18:18:54.18:756,54,0
chr10	78476640	.	CCG	C	23616.34	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=8.653;DP=715;FS=2.653;HRun=0;HaplotypeScore=101.7396;InbreedingCoeff=0.9996;MQ=61.20;MQ0=1;MQRankSum=3.471;QD=40.72;ReadPosRankSum=4.702;VQSLOD=6.7945;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,2416	1/1:0,13:13:36.12:551,36,0	0/0:19,0:15:39.13:0,39,744	0/0:33,0:28:75.26:0,75,1392	1/1:0,34:34:90.31:1378,90,0	0/0:24,0:24:72.25:0,72,1376	0/0:16,0:16:45.15:0,45,869	1/1:1,32:33:96.31:1449,96,0	1/1:0,21:21:57.19:873,57,0	1/1:0,22:22:66.22:1010,66,0	1/1:1,26:27:78.26:1194,78,0	1/1:0,23:23:54.18:827,54,0	1/1:1,22:23:66.22:1009,66,0	1/1:1,24:25:63.21:963,63,0	1/1:0,28:28:69.23:1057,69,0	1/1:0,23:23:63.21:965,63,0	1/1:2,34:36:52.31:1378,52,0	1/1:5,25:30:30.26:1057,30,0	1/1:1,14:14:42.12:619,42,0	1/1:0,34:34:96.33:1462,96,0	1/1:0,21:21:60.20:919,60,0	1/1:1,27:28:66.22:1011,66,0	1/1:1,25:26:75.21:1119,75,0	1/1:1,13:14:36.20:592,36,0	1/1:0,29:29:72.24:1103,72,0	1/1:1,29:30:84.25:1242,84,0	1/1:0,35:35:93.32:1424,93,0	1/1:0,10:10:27.09:413,27,0
chr10	78477867	.	T	TG	3665.48	PASS	AB=1.000;AC=34;AF=0.630;AN=54;BaseQRankSum=5.582;DP=445;FS=24.447;HRun=1;HaplotypeScore=95.1185;InbreedingCoeff=0.7912;MQ=70.81;MQ0=0;MQRankSum=1.648;QD=12.10;ReadPosRankSum=-1.148;VQSLOD=0.6879;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.16:0,84,982	1/1:9,0:9:9:55,9,0	0/0:10,0:9:14.23:0,14,134	0/0:10,0:10:24.03:0,24,274	1/1:20,0:20:0.51:72,1,0	0/0:22,0:22:66.15:0,66,804	0/0:15,0:15:45.13:0,45,565	1/1:25,0:25:41.56:297,42,0	0/0:13,0:13:13.98:0,14,90	1/1:27,0:27:12.90:145,13,0	1/1:17,0:17:13.22:147,13,0	1/1:0,12:12:33.11:489,33,0	1/1:0,15:15:36.12:531,36,0	0/0:15,0:15:33.07:0,33,168	0/0:15,0:15:32.98:0,33,167	0/1:11,0:11:2.02:20,0,2	0/0:11,0:11:27.86:0,28,141	0/1:12,0:12:0.95:1,0,2	1/1:23,0:23:29.78:213,30,0	1/1:14,0:14:11.53:75,12,0	1/1:10,2:12:11.58:121,12,0	1/1:0,6:6:18.06:260,18,0	1/1:4,19:23:67.06:905,67,0	./.	1/1:26,0:25:5.60:90,6,0	1/1:22,0:22:16.57:161,17,0	1/1:22,0:21:6.80:77,7,0	1/1:7,0:7:1.57:6,2,0
chr10	78477868	.	G	GTT	1333.49	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=-7.198;DP=449;FS=1.410;HRun=11;HaplotypeScore=115.2206;InbreedingCoeff=0.9274;MQ=72.55;MQ0=0;MQRankSum=0.342;QD=24.25;ReadPosRankSum=0.523;VQSLOD=3.1976;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:30:56.16:0,56,661	0/0:9,0:9:20.99:0,21,204	0/0:8,0:9:13.18:0,13,92	0/0:12,0:12:23.52:0,24,199	0/0:21,0:21:54.57:0,55,492	0/0:21,0:22:62.77:0,63,582	0/0:15,0:15:42.03:0,42,399	0/0:26,0:26:44.88:0,45,424	1/1:2,9:14:26.06:319,26,0	0/0:26,0:27:68.86:0,69,655	0/0:16,0:16:29.98:0,30,291	0/0:12,0:12:6.81:0,7,22	0/0:16,0:16:11.82:0,12,32	1/1:3,12:15:30.10:433,30,0	1/1:2,13:15:30.10:435,30,0	0/0:11,0:11:27.92:0,28,264	1/1:2,9:11:21.07:304,21,0	0/0:12,0:12:33.52:0,34,317	0/0:23,0:24:52.45:0,52,475	0/0:14,0:14:33:0,33,308	0/0:12,0:12:28.73:0,29,255	0/0:6,0:6:6.19:0,6,18	0/0:23,0:23:18.43:0,18,67	./.	0/0:24,0:25:65.79:0,66,615	0/0:20,0:20:42.01:0,42,407	0/0:22,0:21:57.01:0,57,540	0/0:7,0:7:21.01:0,21,196
chr10	78478091	.	TC	T	3576.20	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.029;DP=579;FS=19.718;HRun=2;HaplotypeScore=56.7681;InbreedingCoeff=0.9991;MQ=84.50;MQ0=0;MQRankSum=-1.679;QD=36.87;ReadPosRankSum=1.967;VQSLOD=1.7796;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.19:0,57,853	0/0:12,0:12:36.12:0,36,537	0/0:16,0:16:45.14:0,45,615	0/0:21,0:21:56.86:0,57,802	0/0:20,0:20:60.20:0,60,899	0/0:25,0:25:75.24:0,75,1102	0/0:9,0:9:27.09:0,27,403	0/0:37,0:37:99:0,111,1663	0/0:15,0:15:45.13:0,45,635	0/0:26,0:26:78.26:0,78,1167	0/0:13,0:13:39.13:0,39,585	1/1:0,28:28:81.26:1052,81,0	1/1:1,23:24:66.21:856,66,0	0/0:25,0:25:75.25:0,75,1123	0/0:29,0:29:87.29:0,87,1303	0/0:16,0:16:48.14:0,48,696	0/0:8,0:8:24.08:0,24,360	0/0:15,0:15:45.15:0,45,668	0/0:20,0:20:57.18:0,57,835	0/0:33,0:33:99:0,99,1481	0/0:15,0:15:45.15:0,45,673	1/1:0,12:12:36.12:467,36,0	1/1:1,22:23:62.89:811,63,0	1/1:0,10:10:30.10:390,30,0	0/0:26,0:26:78.26:0,78,1150	0/0:20,0:20:60.20:0,60,900	0/0:38,0:38:99:0,114,1662	0/0:24,0:24:69.23:0,69,1034
chr10	78478646	.	TCACACA	T	1103.24	PASS	AB=0.777;AC=10;AF=0.185;AN=54;BaseQRankSum=3.365;DP=628;FS=0.831;HRun=0;HaplotypeScore=157.5804;InbreedingCoeff=0.3469;MQ=55.06;MQ0=9;MQRankSum=-5.769;QD=7.40;ReadPosRankSum=1.402;VQSLOD=2.6194;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:47:60.18:0,60,1701	0/0:0,0:9:2.68:0,3,78	./.	0/0:23,0:9:3.01:0,3,42	0/0:19,0:18:12.04:0,12,240	0/1:25,1:27:21.89:22,0,989	0/0:32,0:33:57.19:0,57,1688	0/0:28,0:28:21.96:0,22,399	0/0:11,0:22:6.02:0,6,156	0/0:19,0:19:31.34:0,31,670	0/0:7,0:7:2.60:0,3,78	0/1:10,12:23:12.57:289,0,13	1/1:9,9:18:18.53:367,19,0	0/0:11,0:17:3.01:0,3,79	0/0:18,0:30:18.06:0,18,448	0/0:5,0:21:18.02:0,18,392	0/0:17,0:33:27.03:0,27,517	0/1:9,3:12:15.54:54,0,16	0/0:20,0:20:29.04:0,29,574	0/0:14,0:14:6.02:0,6,89	0/0:45,0:45:30.03:0,30,666	0/1:11,5:17:9.72:153,0,10	1/1:11,6:16:9.45:184,9,0	1/1:26,9:35:9.97:184,10,0	0/0:3,0:24:6.02:0,6,114	0/0:9,0:15:33.58:0,34,767	0/0:19,0:19:32.75:0,33,628	0/0:5,0:9:18.06:0,18,499
chr10	78478647	.	C	CAT	2080.20	PASS	AB=1.000;AC=22;AF=0.407;AN=54;BaseQRankSum=0.743;DP=638;FS=1.366;HRun=0;HaplotypeScore=141.8250;InbreedingCoeff=0.4709;MQ=53.73;MQ0=9;MQRankSum=0.233;QD=6.84;ReadPosRankSum=1.000;VQSLOD=3.2387;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,99,1115	1/1:7,0:7:2.79:37,3,0	1/1:24,0:2:1.81:6,2,0	0/0:22,0:8:17.97:0,18,157	1/1:19,0:18:20.84:184,21,0	0/0:29,0:29:68.89:0,69,701	0/0:35,0:35:93.03:0,93,1016	1/1:30,0:30:68:555,68,0	0/0:22,0:22:7.02:0,7,130	0/1:22,0:22:6.40:238,0,6	1/1:8,0:8:9.48:99,9,0	0/0:22,0:22:43.31:0,43,331	0/0:18,0:18:47.39:0,47,359	0/0:17,0:17:14.22:0,14,122	0/0:29,0:29:20.14:0,20,250	0/1:20,0:20:9.46:113,0,9	0/1:33,0:33:23.16:23,0,137	0/0:11,0:11:18.12:0,18,138	1/1:22,0:22:13.55:235,14,0	./.	1/1:47,0:47:45.51:531,46,0	0/0:17,0:17:34.56:0,35,270	0/0:15,0:14:29.15:0,29,221	0/0:35,0:35:43.46:0,43,346	1/1:24,0:24:5.56:30,6,0	0/1:18,0:17:21.95:22,0,198	0/1:20,0:20:6.90:155,0,7	0/1:10,0:10:38.44:38,0,139
chr10	78480046	.	GAGAA	G	17277.72	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=0.743;DP=704;FS=10.194;HRun=0;HaplotypeScore=157.7755;InbreedingCoeff=0.9992;MQ=73.47;MQ0=3;MQRankSum=-6.722;QD=38.65;ReadPosRankSum=0.725;VQSLOD=4.4632;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,2459	1/1:1,14:15:33.11:553,33,0	0/0:40,0:36:84.14:0,84,1761	0/0:24,0:21:48:0,48,1059	1/1:2,22:23:51.17:843,51,0	0/0:21,0:21:60.21:0,60,1549	0/0:31,0:31:87.28:0,87,2121	1/1:7,27:34:78.25:1333,78,0	0/0:31,0:31:87.30:0,87,2196	1/1:5,19:24:60.20:1025,60,0	1/1:2,18:20:51.17:872,51,0	1/1:8,34:42:84.29:1449,84,0	1/1:0,22:22:63.22:1121,63,0	0/0:25,0:25:63.22:0,63,1626	0/0:26,0:26:75.26:0,75,1911	1/1:1,14:15:33.11:572,33,0	0/0:22,0:22:60.21:0,60,1503	1/1:3,21:24:45.15:800,45,0	1/1:2,19:21:57.17:943,57,0	1/1:7,24:31:63.21:1045,63,0	1/1:4,13:17:33.11:555,33,0	1/1:4,17:21:48.07:733,48,0	1/1:2,22:22:48.16:854,48,0	1/1:3,16:19:33.10:553,33,0	1/1:5,22:27:54.18:914,54,0	1/1:2,23:25:69.22:1184,69,0	1/1:2,33:35:90.31:1553,90,0	1/1:0,7:7:21.07:374,21,0
chr10	78482785	.	C	CA	2477.21	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.191;DP=734;FS=2.928;HRun=2;HaplotypeScore=81.9431;InbreedingCoeff=0.9380;MQ=85.17;MQ0=0;MQRankSum=-3.224;QD=37.53;ReadPosRankSum=3.089;VQSLOD=4.3790;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,120,1549	0/0:18,0:18:54.18:0,54,700	0/0:28,0:28:63.23:0,63,891	0/0:31,0:31:84.26:0,84,1060	0/0:24,0:24:69.22:0,69,893	0/0:29,0:29:87.28:0,87,1129	0/0:23,0:23:69.22:0,69,895	0/0:17,0:16:48.15:0,48,610	0/0:20,0:20:60.19:0,60,777	0/0:30,0:29:90.24:0,90,1129	0/0:22,0:22:66.21:0,66,857	0/0:15,0:15:45.15:0,45,584	0/0:41,0:41:99:0,123,1580	0/0:22,0:22:66.21:0,66,857	0/0:41,0:41:99:0,123,1580	0/0:47,0:47:99:0,138,1792	0/0:20,0:20:54.17:0,54,698	1/1:1,20:21:60.19:878,60,0	0/0:18,0:18:48.09:0,48,602	0/0:22,0:22:66.18:0,66,826	0/0:39,0:39:99:0,111,1410	0/0:25,0:25:69.22:0,69,895	0/0:17,0:17:48.16:0,48,622	0/0:24,0:24:69.22:0,69,895	0/0:20,0:20:60.19:0,60,776	1/1:2,26:28:3.34:1046,3,0	0/0:29,0:29:81.26:0,81,1050	1/1:2,15:17:49.01:685,49,0
chr10	78483760	.	AC	A	1491.52	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=6.951;DP=650;FS=1.444;HRun=1;HaplotypeScore=113.4110;InbreedingCoeff=0.8933;MQ=64.63;MQ0=1;MQRankSum=-0.776;QD=13.32;ReadPosRankSum=-6.880;VQSLOD=0.0284;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,1978	0/0:12,0:12:36.10:0,36,547	0/0:28,0:20:53.70:0,54,670	0/1:23,0:17:9.88:10,0,300	0/0:33,0:33:99:0,99,1518	0/0:22,0:22:57.60:0,58,824	0/0:21,0:21:57.19:0,57,876	0/0:30,0:30:87.27:0,87,1269	0/0:33,0:33:49.86:0,50,178	0/0:33,0:33:94.19:0,94,1438	0/0:19,0:19:57.19:0,57,888	1/1:16,4:20:54.46:423,54,0	1/1:12,2:14:21.58:275,22,0	0/0:21,0:21:27.46:0,27,182	0/0:16,0:16:24.04:0,24,86	0/0:22,0:22:66.21:0,66,1014	0/0:26,0:26:36.55:0,37,171	0/0:23,0:23:34.49:0,34,128	0/0:27,0:27:76.04:0,76,1180	0/0:27,0:27:78.68:0,79,1181	0/0:32,0:32:96.30:0,96,1467	1/1:15,3:18:38.42:284,38,0	1/1:8,5:14:31.69:218,32,0	1/1:15,8:23:53.92:461,54,0	0/0:15,0:15:45.15:0,45,703	0/0:21,0:21:48.26:0,48,251	0/0:23,0:23:66.21:0,66,1021	0/0:11,0:11:17.60:0,18,79
chr10	78483761	.	CAACAAAAA	C	7844.90	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.351;DP=650;FS=2.951;HRun=0;HaplotypeScore=174.8386;InbreedingCoeff=0.9663;MQ=64.11;MQ0=1;MQRankSum=-13.419;QD=52.30;ReadPosRankSum=6.341;VQSLOD=4.5744;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,4609	0/0:11,0:11:33.11:0,33,1405	0/0:26,0:18:47.88:0,48,1101	0/0:22,0:17:39.95:0,40,810	0/0:33,0:33:96.29:0,96,3697	0/0:22,0:22:57.16:0,57,1908	0/0:21,0:21:57.20:0,57,2133	0/0:29,0:29:79.49:0,79,2560	1/1:0,33:33:65.73:1857,66,0	0/0:33,0:33:93.30:0,93,3307	0/0:19,0:19:57.18:0,57,2013	0/0:19,0:20:60.12:0,60,941	0/0:14,0:14:38.96:0,39,601	1/1:2,19:21:42.14:1086,42,0	1/1:0,16:16:30.10:827,30,0	0/0:22,0:22:63.13:0,63,2200	1/1:2,23:25:36.07:1022,36,0	1/1:0,23:23:45.11:1161,45,0	0/0:28,0:28:84.29:0,84,2919	0/0:28,0:28:81.71:0,82,2729	0/0:32,0:32:96.30:0,96,3291	0/0:19,0:19:2.71:0,3,490	0/0:14,0:14:33.50:0,33,484	0/0:21,0:22:56.67:0,57,923	0/0:15,0:15:45.12:0,45,1529	1/1:2,19:21:57.05:1364,57,0	0/0:25,0:25:72.23:0,72,2670	1/1:2,9:11:21.07:528,21,0
chr10	78483763	.	AC	A	3203.60	PASS	AB=0.976;AC=24;AF=0.429;AN=56;BaseQRankSum=17.597;DP=635;FS=5.046;HRun=1;HaplotypeScore=103.2081;InbreedingCoeff=0.8744;MQ=61.23;MQ0=1;MQRankSum=-11.456;QD=12.87;ReadPosRankSum=-0.454;VQSLOD=2.1948;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1390	0/0:11,0:11:30.01:0,30,372	0/0:26,0:17:31.31:0,31,382	0/1:19,1:14:76.94:77,0,113	0/0:33,0:33:92.16:0,92,1089	0/0:22,0:22:41.13:0,41,568	0/0:21,0:21:50.82:0,51,579	0/0:30,0:30:88.29:0,88,907	1/1:33,0:33:62.55:399,63,0	0/0:32,0:32:87.91:0,88,985	0/0:20,0:20:34.81:0,35,591	1/1:18,2:20:54.37:408,54,0	1/1:12,2:14:36.78:290,37,0	1/1:20,0:20:30.37:211,30,0	1/1:16,0:16:29.55:190,30,0	0/0:21,0:21:63.06:0,63,690	1/1:24,0:24:35.46:226,35,0	1/1:23,0:23:41.31:268,41,0	0/0:29,0:29:79.68:0,80,912	0/0:28,0:28:67.27:0,67,776	0/0:32,0:32:81.62:0,82,965	1/1:11,3:14:36.98:252,37,0	1/1:10,4:14:34.05:233,34,0	1/1:14,7:21:55.17:466,55,0	0/0:15,0:15:45.08:0,45,495	1/1:19,0:19:52.19:333,52,0	0/0:23,1:24:37.36:0,37,642	0/1:11,0:11:4.13:75,0,4
chr10	78483764	.	CA	C	463.74	PASS	AB=0.952;AC=16;AF=0.286;AN=56;BaseQRankSum=15.001;DP=643;FS=1.269;HRun=11;HaplotypeScore=118.3959;InbreedingCoeff=0.7419;MQ=61.02;MQ0=1;MQRankSum=-11.246;QD=2.47;ReadPosRankSum=5.412;VQSLOD=-0.4883;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,1:45:86.47:0,86,1105	0/0:10,1:11:5.54:0,6,263	0/0:25,0:17:23.61:0,24,219	0/1:17,2:13:45.65:52,0,46	0/0:34,0:34:85.07:0,85,877	0/0:19,2:22:24.31:0,24,438	0/0:21,1:22:20.47:0,20,423	0/0:28,0:29:72.01:0,72,740	1/1:33,0:33:48.35:149,48,0	0/0:29,2:32:50.37:0,50,719	0/0:24,0:24:48.81:0,49,477	0/0:20,0:20:7.29:0,7,75	0/0:14,0:14:6.25:0,6,62	1/1:20,0:20:28.06:86,28,0	1/1:16,0:16:19.98:62,20,0	0/0:21,0:21:45.10:0,45,472	1/1:24,0:24:26.46:82,26,0	1/1:23,0:23:23.25:79,23,0	0/0:29,0:29:75.11:0,75,774	0/0:27,1:29:37.46:0,37,570	0/0:28,2:32:18.90:0,19,629	0/0:14,0:14:4.42:0,4,36	0/0:14,0:14:2.20:0,2,28	0/1:23,0:23:2.21:2,0,41	0/0:13,0:13:33.08:0,33,345	1/1:19,0:19:32.71:100,33,0	0/0:22,2:24:8.06:0,8,457	1/1:10,0:11:14.73:45,15,0
chr10	78484018	.	C	CT	2014.41	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.163;DP=595;FS=1.985;HRun=1;HaplotypeScore=89.3687;InbreedingCoeff=0.9963;MQ=83.02;MQ0=0;MQRankSum=-13.034;QD=22.14;ReadPosRankSum=-0.845;VQSLOD=3.5109;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,162,2064	0/0:6,0:6:18.06:0,18,233	0/0:18,0:18:48.14:0,48,608	0/0:20,0:20:39.39:0,39,544	0/0:28,0:28:81.18:0,81,1023	0/0:15,0:15:45.15:0,45,584	0/0:35,0:35:99:0,102,1309	0/0:18,0:18:54.18:0,54,700	0/0:17,0:17:51.17:0,51,661	0/0:25,0:25:69.22:0,69,883	0/0:16,0:16:45.15:0,45,583	1/1:5,19:24:66.05:618,66,0	1/1:5,15:20:59.89:544,60,0	0/0:23,0:23:69.22:0,69,889	0/0:23,0:23:66.20:0,66,842	0/0:15,0:15:45.13:0,45,570	0/0:35,0:35:99:0,105,1363	0/0:31,0:30:90.29:0,90,1168	0/0:18,0:18:54.17:0,54,689	0/0:16,0:16:42.13:0,42,536	0/0:32,0:32:93.25:0,93,1159	1/1:6,14:20:53.95:482,54,0	1/1:3,11:15:38.84:345,39,0	1/1:4,8:12:21.60:201,22,0	0/0:20,0:20:57.17:0,57,726	0/0:14,0:14:42.14:0,42,545	0/0:15,0:15:45.15:0,45,584	0/0:7,0:7:21.07:0,21,272
chr10	78484021	.	G	GGAA	4066.90	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.747;DP=593;FS=4.890;HRun=0;HaplotypeScore=104.4693;InbreedingCoeff=0.9954;MQ=83.75;MQ0=0;MQRankSum=-12.723;QD=48.42;ReadPosRankSum=-0.870;VQSLOD=5.4856;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,154,2670	0/0:6,0:6:18.06:0,18,317	0/0:18,0:18:48.16:0,48,847	0/0:21,0:21:32.64:0,33,855	0/0:28,0:28:84.08:0,84,1441	0/0:15,0:15:45.15:0,45,793	0/0:36,0:36:99:0,105,1814	0/0:18,0:18:51.17:0,51,893	0/0:17,0:17:51.17:0,51,898	0/0:24,0:24:69.23:0,69,1161	0/0:16,0:16:45.15:0,45,793	1/1:5,19:24:66.18:1230,66,0	1/1:4,15:19:38.92:985,39,0	0/0:25,0:25:75.24:0,75,1284	0/0:24,0:24:69.23:0,69,1190	0/0:15,0:15:45.15:0,45,780	0/0:35,0:35:99:0,105,1851	0/0:32,0:31:90.31:0,90,1587	0/0:19,0:19:54.19:0,54,952	0/0:16,0:16:45.15:0,45,781	0/0:29,0:29:87.27:0,87,1478	1/1:2,14:16:45.15:834,45,0	1/1:4,11:16:42.11:726,42,0	1/1:1,8:9:18.49:292,18,0	0/0:19,0:19:57.20:0,57,998	0/0:17,0:17:48.14:0,48,793	0/0:17,0:17:48.15:0,48,819	0/0:7,0:7:21.07:0,21,370
chr10	78484128	.	CAGCGCAG	C	7342.22	PASS	AB=0.535;AC=23;AF=0.411;AN=56;BaseQRankSum=13.538;DP=587;FS=12.826;HRun=0;HaplotypeScore=142.3261;InbreedingCoeff=0.8838;MQ=93.95;MQ0=1;MQRankSum=-13.709;QD=36.71;ReadPosRankSum=3.502;VQSLOD=3.7469;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,135,5045	0/0:11,0:11:27.09:0,27,975	0/0:36,0:36:71.61:0,72,2469	0/0:35,0:35:81.27:0,81,2787	0/0:17,0:17:39.13:0,39,1416	0/0:13,0:13:39.13:0,39,1488	0/0:31,0:31:84.27:0,84,2814	0/0:22,0:22:51.17:0,51,1714	1/1:3,13:16:30.10:711,30,0	0/0:18,0:18:42.14:0,42,1506	0/0:16,0:16:48.16:0,48,1839	1/1:3,18:21:42.14:1024,42,0	1/1:2,11:13:18.06:439,18,0	1/1:2,16:18:33.11:804,33,0	1/1:3,13:16:36.12:877,36,0	0/0:14,0:14:36.12:0,36,1375	1/1:11,18:29:17.76:438,18,0	1/1:10,15:25:33.11:804,33,0	0/0:29,0:29:75.26:0,75,2612	0/0:21,0:21:57.20:0,57,2149	0/0:42,0:41:99:0,117,4343	1/1:4,8:12:9.03:219,9,0	1/1:4,4:8:6.02:146,6,0	1/1:4,11:15:18.06:403,18,0	0/0:18,0:17:54.19:0,54,2004	0/1:3,20:23:51.99:1330,0,52	0/0:16,0:16:39.13:0,39,1454	1/1:1,3:4:6.02:146,6,0
chr10	78485137	.	GATC	G	1836.33	PASS	AB=0.963;AC=11;AF=0.196;AN=56;BaseQRankSum=3.217;DP=677;FS=1.211;HRun=0;HaplotypeScore=142.1066;InbreedingCoeff=0.7321;MQ=66.36;MQ0=8;MQRankSum=4.031;QD=14.13;ReadPosRankSum=-0.101;VQSLOD=3.5850;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.23:0,66,1274	0/0:4,0:4:5.99:0,6,80	0/0:42,0:22:33.58:0,34,585	0/0:48,0:26:13.52:0,14,228	0/0:26,0:26:33.11:0,33,632	0/0:23,0:23:45.13:0,45,842	0/0:28,0:28:57.18:0,57,1077	1/1:22,9:31:27.07:348,27,0	0/0:18,0:18:18.06:0,18,271	0/0:24,0:24:45.15:0,45,869	0/0:15,0:15:18.06:0,18,351	0/0:18,0:31:18.06:0,18,254	0/0:14,0:22:18.06:0,18,235	0/0:25,0:29:15.03:0,15,190	0/0:24,0:35:21.07:0,21,277	0/0:27,0:27:7.65:0,8,828	0/0:18,0:26:12.04:0,12,167	0/0:5,1:19:1.63:0,2,462	1/1:7,7:14:24.08:320,24,0	1/1:9,4:13:6.02:81,6,0	1/1:5,21:26:54.18:729,54,0	0/0:24,0:24:12:0,12,157	0/0:12,0:18:11.74:0,12,134	0/0:15,0:24:11.93:0,12,167	0/1:25,1:26:42.74:43,0,370	0/0:13,0:32:75.25:0,75,1051	1/1:7,13:20:36.12:486,36,0	0/0:2,0:5:6.02:0,6,79
chr10	78485527	.	AG	A	3031.59	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.291;DP=585;FS=0.819;HRun=7;HaplotypeScore=71.4648;InbreedingCoeff=0.9415;MQ=84.28;MQ0=0;MQRankSum=-2.458;QD=22.29;ReadPosRankSum=5.191;VQSLOD=3.2689;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:93.28:0,93,1143	0/0:4,0:4:12.03:0,12,139	0/0:30,0:29:59.05:0,59,616	0/0:15,0:15:23.73:0,24,291	0/0:19,0:19:54.17:0,54,670	0/0:27,0:26:69.20:0,69,843	0/0:26,0:26:72.19:0,72,877	0/0:29,0:29:75.16:0,75,888	1/1:3,19:22:48.11:489,48,0	0/0:15,0:15:39.11:0,39,470	0/0:18,0:18:42.13:0,42,528	0/0:25,0:25:69.14:0,69,796	0/0:26,0:26:78.22:0,78,952	1/1:4,20:24:45.10:459,45,0	1/1:3,17:20:51.11:520,51,0	0/0:27,0:27:75.22:0,75,919	1/1:2,18:20:51.11:520,51,0	1/1:2,32:34:81.18:826,81,0	0/0:14,0:14:36.09:0,36,426	0/0:17,0:17:42.13:0,42,528	0/0:25,0:25:69.20:0,69,853	0/0:16,0:16:45.13:0,45,553	0/0:18,0:18:39.12:0,39,490	0/0:21,0:21:57.15:0,57,686	0/0:16,0:16:36.09:0,36,428	1/1:1,12:13:1.31:315,1,0	0/0:25,0:25:69.21:0,69,854	1/1:0,3:3:9.02:92,9,0
chr10	78485921	.	A	ACT	6749.04	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=5.816;DP=655;FS=5.782;HRun=0;HaplotypeScore=109.2728;InbreedingCoeff=0.9996;MQ=82.48;MQ0=0;MQRankSum=-8.073;QD=48.91;ReadPosRankSum=2.109;VQSLOD=5.8691;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:96.32:0,96,1413	0/0:11,0:11:30.10:0,30,440	0/0:26,0:25:65.94:0,66,897	0/0:26,0:27:54.45:0,54,881	0/0:20,0:20:60.19:0,60,862	0/0:25,0:25:75.21:0,75,1077	0/0:15,0:15:42.11:0,42,575	0/0:24,0:24:69.23:0,69,1015	1/1:4,19:23:60.21:1118,60,0	0/0:27,0:27:78.26:0,78,1149	0/0:15,0:15:41.79:0,42,618	0/0:15,0:15:30.09:0,30,423	0/0:28,0:28:51.17:0,51,751	1/1:3,21:24:69.19:1239,69,0	1/1:2,25:27:75.26:1402,75,0	0/0:33,0:33:93.31:0,93,1369	1/1:2,21:23:42.14:784,42,0	1/1:0,14:14:39.13:730,39,0	0/0:24,0:24:72.24:0,72,1060	0/0:29,0:29:87.28:0,87,1259	0/0:21,0:21:60.20:0,60,882	0/0:29,0:29:66.22:0,66,958	0/0:29,0:29:75.25:0,75,1100	0/0:28,0:28:63.21:0,63,928	0/0:19,0:19:54.17:0,54,772	1/1:0,18:18:54.16:975,54,0	0/0:34,0:34:99:0,102,1502	1/1:0,9:9:27.09:502,27,0
chr10	78485975	.	A	ACC	1511.31	PASS	AB=0.954;AC=8;AF=0.143;AN=56;BaseQRankSum=15.232;DP=651;FS=1.773;HRun=1;HaplotypeScore=156.9637;InbreedingCoeff=0.1207;MQ=54.36;MQ0=4;MQRankSum=-14.046;QD=10.50;ReadPosRankSum=4.001;VQSLOD=0.8035;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:91.70:0,92,1544	0/0:6,0:6:15.05:0,15,228	0/0:17,0:11:27.08:0,27,392	0/0:17,0:11:20.51:0,21,265	0/0:29,0:29:78.26:0,78,1182	0/0:28,0:28:78.26:0,78,1193	0/0:13,0:13:33.68:0,34,518	0/0:34,0:34:87.29:0,87,1307	0/1:18,1:19:53.22:222,0,53	0/0:26,0:26:72.21:0,72,1060	0/0:14,0:14:39.12:0,39,576	0/0:19,0:19:17.84:0,18,166	0/0:32,0:32:40.63:0,41,356	0/1:21,0:21:99:112,0,233	0/1:27,1:28:19.99:338,0,20	0/0:30,0:30:87.30:0,87,1330	0/1:17,1:19:63.78:283,0,64	0/1:15,1:16:43.33:299,0,43	0/0:32,0:32:90.09:0,90,1337	0/0:24,0:24:72.22:0,72,1078	0/0:23,0:23:69.22:0,69,1034	0/0:30,0:30:77.72:0,78,881	0/0:21,0:21:50.89:0,51,593	0/0:23,0:23:11.95:0,12,139	0/0:16,0:15:45.14:0,45,665	0/1:24,1:25:99:211,0,106	0/0:35,0:35:99:0,105,1603	1/1:15,1:16:30.27:188,30,0
chr10	78485978	.	A	ACC	6694.61	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=16.087;DP=654;FS=3.736;HRun=1;HaplotypeScore=142.9028;InbreedingCoeff=0.9880;MQ=55.35;MQ0=4;MQRankSum=-15.107;QD=47.48;ReadPosRankSum=2.618;VQSLOD=5.0351;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:99:0,107,1565	0/0:6,0:6:15.05:0,15,229	0/0:18,0:11:33.11:0,33,502	0/0:17,0:11:17.15:0,17,238	0/0:30,0:30:90.29:0,90,1351	0/0:26,0:26:78.26:0,78,1194	0/0:12,0:13:35.30:0,35,548	0/0:36,0:36:96.30:0,96,1410	1/1:10,9:19:51.07:809,51,0	0/0:26,0:26:75.23:0,75,1122	0/0:15,0:15:39.13:0,39,597	0/0:20,0:20:17.84:0,18,167	0/0:32,0:32:40.66:0,41,358	1/1:10,10:20:60.15:965,60,0	1/1:13,15:28:71.20:1198,71,0	0/0:30,0:30:87.30:0,87,1328	1/1:9,9:19:34.63:846,35,0	1/1:7,6:15:42.14:772,42,0	0/0:31,0:31:92.54:0,93,1347	0/0:26,0:26:69.23:0,69,1051	0/0:24,0:24:69.19:0,69,1030	0/0:29,0:29:74.72:0,75,856	0/0:22,0:22:50.88:0,51,607	0/0:23,0:23:11.97:0,12,137	0/0:16,0:15:45.15:0,45,689	1/1:9,15:24:68.97:1232,69,0	0/0:35,0:35:99:0,99,1515	1/1:4,12:16:48.16:873,48,0
chr10	78485979	.	CA	C	1487.71	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=16.126;DP=641;FS=2.160;HRun=2;HaplotypeScore=138.6657;InbreedingCoeff=0.9900;MQ=56.90;MQ0=3;MQRankSum=-14.633;QD=12.00;ReadPosRankSum=3.625;VQSLOD=2.6762;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,1472	0/0:6,0:6:18.06:0,18,261	0/0:18,0:12:36.12:0,36,501	0/0:19,0:13:22.66:0,23,278	0/0:30,0:30:90.30:0,90,1291	0/0:26,0:26:78.26:0,78,1139	0/0:14,0:14:20.74:0,21,517	0/0:36,0:36:94.18:0,94,1280	1/1:14,2:16:40.85:238,41,0	0/0:26,0:26:73.12:0,73,1025	0/0:15,0:15:42.13:0,42,595	0/0:20,0:20:18.06:0,18,233	0/0:32,0:32:42.12:0,42,536	1/1:13,2:15:35.19:220,35,0	1/1:25,1:26:64.18:313,64,0	0/0:30,0:30:90.25:0,90,1257	1/1:16,0:17:39.92:213,40,0	1/1:14,0:14:28.92:164,29,0	0/0:30,0:30:72.65:0,73,1193	0/0:27,0:27:81.25:0,81,1138	0/0:24,0:24:72.23:0,72,1027	0/0:29,0:29:75.25:0,75,1049	0/0:21,0:21:48.16:0,48,664	0/0:23,0:23:12.03:0,12,148	0/0:17,0:16:48.14:0,48,672	1/1:18,2:20:47.47:245,47,0	0/0:36,0:36:99:0,108,1557	1/1:14,2:16:39.95:294,40,0
chr10	78485981	.	AC	A	2692.38	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=16.044;DP=648;FS=2.160;HRun=1;HaplotypeScore=136.3989;InbreedingCoeff=0.9845;MQ=58.86;MQ0=3;MQRankSum=-14.441;QD=21.89;ReadPosRankSum=3.794;VQSLOD=3.9914;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1519	0/0:6,0:6:18.06:0,18,277	0/0:18,1:13:39.12:0,39,558	0/0:22,0:16:16.61:0,17,336	0/0:32,0:32:96.29:0,96,1410	0/0:27,0:27:81.24:0,81,1214	0/0:14,0:14:34.16:0,34,559	0/0:35,0:35:94.51:0,95,1298	1/1:11,5:16:44.15:382,44,0	0/0:27,0:27:79.49:0,79,1151	0/0:15,0:15:42.12:0,42,621	0/0:21,0:21:18.06:0,18,247	0/0:33,0:33:42.13:0,42,570	1/1:11,2:14:41.62:319,42,0	1/1:16,10:26:77.62:691,78,0	0/0:30,0:30:87.28:0,87,1326	1/1:12,5:17:46.04:394,46,0	1/1:9,5:14:35.80:321,36,0	0/0:28,1:29:52.84:0,53,1223	0/0:27,0:27:81.27:0,81,1229	0/0:24,0:24:72.24:0,72,1106	0/0:30,0:30:78.24:0,78,1136	0/0:21,0:21:48.63:0,49,711	0/0:23,0:23:9.03:0,9,129	0/0:18,0:17:51.16:0,51,754	1/1:17,3:20:59.35:444,59,0	0/0:36,0:36:99:0,108,1665	1/1:14,2:16:47.41:340,47,0
chr10	78485982	.	C	CCA	6878.64	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.464;DP=651;FS=1.198;HRun=0;HaplotypeScore=133.8343;InbreedingCoeff=0.9808;MQ=58.80;MQ0=3;MQRankSum=-14.038;QD=54.59;ReadPosRankSum=3.293;VQSLOD=4.9493;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1586	0/0:6,0:6:18.06:0,18,289	0/0:19,0:14:39.04:0,39,578	0/0:24,0:17:12.01:0,12,356	0/0:33,0:33:96.27:0,96,1478	0/0:27,0:27:81.25:0,81,1271	0/0:14,0:14:41.71:0,42,619	0/0:33,0:33:90.29:0,90,1392	1/1:8,9:17:48.08:883,48,0	0/0:27,0:27:81.25:0,81,1279	0/0:15,0:15:39.12:0,39,610	0/0:21,0:21:17.87:0,18,153	0/0:33,0:33:41.01:0,41,369	1/1:6,9:15:42.14:785,42,0	1/1:12,15:27:78.27:1516,78,0	0/0:30,0:30:87.28:0,87,1393	1/1:6,11:17:48.08:896,48,0	1/1:6,8:14:36.12:713,36,0	0/0:28,0:28:82.83:0,83,1307	0/0:27,0:27:81.25:0,81,1254	0/0:24,0:24:72.23:0,72,1145	0/0:30,0:30:77.92:0,78,971	0/0:21,0:21:45.12:0,45,608	0/0:23,0:23:8.97:0,9,100	0/0:18,0:17:51.16:0,51,800	1/1:5,15:20:60.21:1169,60,0	0/0:37,0:37:99:0,108,1736	1/1:4,12:16:48.16:916,48,0
chr10	78485988	.	C	CAACAAA	6340.21	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=9.862;DP=660;FS=3.962;HRun=0;HaplotypeScore=186.9302;InbreedingCoeff=0.9731;MQ=62.66;MQ0=3;MQRankSum=-13.039;QD=23.66;ReadPosRankSum=1.781;VQSLOD=4.7382;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:57.25:0,57,1345	0/0:6,0:6:15.02:0,15,247	0/0:22,0:17:38.25:0,38,507	0/0:26,0:20:10.95:0,11,303	0/0:33,0:33:95.96:0,96,1385	0/0:25,0:25:63.03:0,63,1011	0/0:13,0:13:36.04:0,36,548	0/0:32,0:32:65.56:0,66,722	1/1:19,0:19:49.29:362,49,0	0/0:28,0:28:69.88:0,70,1066	0/0:14,0:14:42.03:0,42,631	1/1:0,19:19:12.04:413,12,0	1/1:3,29:33:30.10:1032,30,0	1/1:15,0:15:36.26:276,36,0	1/1:29,0:29:83.04:626,83,0	0/0:30,0:30:84.16:0,84,1405	1/1:20,0:20:53.01:371,53,0	1/1:14,0:14:38.52:267,39,0	0/0:24,0:24:66.09:0,66,1108	0/0:26,0:26:74.73:0,75,1228	0/0:24,0:24:60.05:0,60,986	1/1:1,30:33:71.74:1439,72,0	1/1:5,17:25:26.82:704,27,0	1/1:0,22:24:6.02:195,6,0	0/0:18,0:17:45.06:0,45,706	1/1:21,0:21:55.11:393,55,0	0/0:35,0:35:99:0,99,1589	1/1:16,0:16:38.85:262,39,0
chr10	78486325	.	T	TC	5763.24	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-14.581;DP=666;FS=1.119;HRun=4;HaplotypeScore=63.1775;InbreedingCoeff=0.9882;MQ=85.14;MQ0=0;MQRankSum=-2.618;QD=36.25;ReadPosRankSum=3.470;VQSLOD=5.2397;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,111,1244	0/0:7,0:7:21.06:0,21,237	0/0:28,0:28:25.37:0,25,607	0/0:15,1:16:12.39:0,12,239	0/0:26,0:26:72.16:0,72,807	0/0:23,0:23:69.20:0,69,783	0/0:24,0:24:69.20:0,69,782	0/0:28,0:28:72.19:0,72,809	1/1:2,22:24:63.21:851,63,0	0/0:32,0:32:90.24:0,90,1006	0/0:16,0:16:42.12:0,42,475	0/0:24,0:24:63.18:0,63,715	0/0:14,0:14:42.12:0,42,476	1/1:1,24:25:66.22:903,66,0	1/1:0,28:28:81.27:1108,81,0	0/0:25,0:25:69.20:0,69,782	1/1:2,28:30:75.25:1026,75,0	1/1:2,19:21:51.17:687,51,0	0/0:19,0:19:48.13:0,48,537	0/0:31,0:31:87.25:0,87,986	0/0:26,0:26:72.16:0,72,802	0/0:18,0:18:54.15:0,54,611	0/0:22,0:22:66.19:0,66,748	0/0:19,0:19:57.13:0,57,625	0/0:28,0:28:78.22:0,78,883	1/1:0,26:26:75.25:1025,75,0	0/0:37,0:37:99:0,99,1120	1/1:0,5:5:12.04:164,12,0
chr10	78486828	.	GAC	G	6140.15	PASS	AB=0.526;AC=13;AF=0.232;AN=56;BaseQRankSum=16.588;DP=690;FS=13.622;HRun=0;HaplotypeScore=100.0977;InbreedingCoeff=0.9465;MQ=81.72;MQ0=2;MQRankSum=-5.819;QD=41.49;ReadPosRankSum=4.511;VQSLOD=6.0979;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,2028	0/0:11,0:11:33.11:0,33,636	0/0:29,0:29:87.23:0,87,1519	0/0:22,0:22:61.17:0,61,1203	0/0:26,0:26:78.27:0,78,1505	0/0:16,0:16:48.16:0,48,916	0/0:31,0:31:90.31:0,90,1730	0/0:32,0:32:96.32:0,96,1822	1/1:1,16:16:48.16:734,48,0	0/0:30,0:30:90.31:0,90,1724	0/0:18,0:18:51.17:0,51,985	0/0:27,0:27:78.27:0,78,1498	0/0:31,0:31:93.32:0,93,1794	1/1:2,18:20:60.20:917,60,0	1/1:1,30:30:87.30:1331,87,0	0/0:24,0:24:72.23:0,72,1357	1/1:1,31:31:84.26:1286,84,0	1/1:0,12:12:36.12:551,36,0	0/0:30,0:30:90.30:0,90,1709	0/0:25,0:25:75.26:0,75,1423	0/0:32,0:32:93.32:0,93,1796	0/0:23,0:23:66.21:0,66,1241	0/0:17,0:17:51.17:0,51,983	0/0:25,0:25:75.26:0,75,1449	0/0:22,0:22:66.22:0,66,1243	0/1:2,18:20:0.79:769,0,1	0/0:35,0:35:99:0,102,1895	1/1:4,12:15:36.12:551,36,0
chr10	78486894	.	T	TC	5796.09	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.120;DP=747;FS=2.390;HRun=5;HaplotypeScore=91.2721;InbreedingCoeff=0.9970;MQ=71.95;MQ0=0;MQRankSum=-5.487;QD=32.75;ReadPosRankSum=0.267;VQSLOD=5.0229;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,117,1246	0/0:6,0:6:15.04:0,15,161	0/0:27,0:23:49.82:0,50,462	0/0:31,0:29:65.29:0,65,605	0/0:39,0:39:99:0,114,1207	0/0:19,0:19:57.14:0,57,612	0/0:17,0:17:45.11:0,45,483	0/0:29,0:29:44.29:0,44,590	1/1:2,27:29:78.25:1024,78,0	0/0:28,0:28:78.17:0,78,827	0/0:20,0:20:54.08:0,54,566	0/0:24,0:24:60.13:0,60,636	0/0:32,0:32:84.21:0,84,902	1/1:3,19:22:54.18:710,54,0	1/1:4,37:41:99:1339,105,0	0/0:25,0:25:66.16:0,66,708	1/1:9,17:26:66.17:836,66,0	1/1:5,10:15:39.03:459,39,0	0/0:25,0:25:60.13:0,60,638	0/0:41,0:41:99:0,114,1211	0/0:21,0:21:63.16:0,63,677	0/0:28,0:28:84.20:0,84,895	0/0:23,0:23:66.16:0,66,703	0/0:24,0:24:63.13:0,63,667	0/0:30,0:30:78.20:0,78,837	1/1:3,22:25:33.96:796,34,0	0/0:37,0:37:90.21:0,90,967	1/1:3,16:19:48.16:631,48,0
chr10	78488003	.	GA	G	7511.06	PASS	AB=0.806;AC=32;AF=0.571;AN=56;BaseQRankSum=9.163;DP=623;FS=3.553;HRun=10;HaplotypeScore=73.9516;InbreedingCoeff=0.8642;MQ=68.79;MQ0=2;MQRankSum=-0.293;QD=18.68;ReadPosRankSum=2.587;VQSLOD=5.9111;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:58.48:0,58,617	1/1:2,8:10:20.03:162,20,0	0/0:19,0:13:11.88:0,12,180	0/1:20,0:12:3.11:3,0,94	1/1:3,20:23:59.98:519,60,0	0/0:16,0:16:42.11:0,42,465	0/0:17,0:17:42.06:0,42,450	1/1:8,23:31:65.57:567,66,0	0/0:21,0:21:57.13:0,57,613	1/1:7,20:27:59.97:521,60,0	1/1:5,25:30:38.78:566,39,0	1/1:3,26:29:74.98:651,75,0	1/1:4,19:23:41.98:365,42,0	0/0:14,0:14:33.05:0,33,345	0/0:29,0:29:44.09:0,44,689	1/1:0,17:17:38.99:339,39,0	0/0:23,0:25:62.98:0,63,668	0/0:7,0:27:25.92:0,26,253	1/1:6,15:21:8.79:305,9,0	1/1:8,19:27:56.94:489,57,0	1/1:0,8:8:24:208,24,0	1/1:5,26:31:71.97:625,72,0	1/1:2,28:30:71.51:624,72,0	0/1:4,7:11:12.10:135,0,12	1/1:2,29:31:80.98:703,81,0	0/0:25,0:25:51.14:0,51,564	1/1:4,29:33:83.98:729,84,0	0/0:4,0:4:12.03:0,12,132
chr10	78488991	.	G	GA	2492.77	PASS	AB=0.946;AC=29;AF=0.518;AN=56;BaseQRankSum=-6.887;DP=579;FS=9.062;HRun=13;HaplotypeScore=78.1366;InbreedingCoeff=0.6870;MQ=63.11;MQ0=17;MQRankSum=1.585;QD=7.86;ReadPosRankSum=-5.809;VQSLOD=0.5534;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:28,3:31:35.78:0,36,375	1/1:7,5:11:7.25:59,7,0	0/0:13,0:7:3.49:0,3,58	0/1:11,0:6:12.93:20,0,13	1/1:16,6:23:3.48:251,3,0	0/0:15,2:18:25.27:0,25,168	0/1:20,5:25:33.97:34,0,221	1/1:13,17:27:23.14:328,23,0	0/0:6,0:9:7.51:0,8,21	1/1:8,11:18:26.19:263,26,0	1/1:5,17:23:41.47:337,41,0	0/0:3,0:23:19.77:0,20,56	0/0:7,0:13:11.72:0,12,34	0/0:3,0:17:8.12:0,8,23	0/0:5,0:19:19.96:0,20,58	1/1:3,11:16:5.27:193,5,0	0/0:10,0:36:44.52:0,45,146	0/0:31,0:30:61.40:0,61,415	1/1:10,15:25:31.50:373,31,0	1/1:10,16:28:17.37:257,17,0	1/1:3,7:11:8.85:70,9,0	0/0:5,0:20:17.03:0,17,48	0/1:4,0:16:1.13:1,0,23	0/0:4,0:21:26.22:0,26,76	1/1:1,24:26:32.66:284,33,0	1/1:12,0:19:19.96:118,20,0	1/1:5,14:17:8.63:68,9,0	1/1:5,0:8:5.84:42,6,0
chr10	78490372	.	GC	G	2089.11	PASS	AB=0.903;AC=18;AF=0.321;AN=56;BaseQRankSum=4.957;DP=449;FS=7.221;HRun=10;HaplotypeScore=69.7999;InbreedingCoeff=0.5591;MQ=87.47;MQ0=1;MQRankSum=-2.402;QD=11.11;ReadPosRankSum=4.643;VQSLOD=2.6913;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,2:32:14.47:0,14,566	0/0:4,0:4:7.24:0,7,53	0/0:21,0:21:36.77:0,37,373	0/0:20,0:19:19.10:0,19,254	0/1:7,0:14:12.03:12,0,60	0/1:14,3:17:22.02:22,0,235	0/0:21,1:22:19.08:0,19,438	0/0:16,0:25:18.21:0,18,119	0/0:3,0:7:2.84:0,3,14	0/0:6,0:9:4.06:0,4,36	0/0:5,0:6:6.20:0,6,47	1/1:7,22:29:68.93:594,69,0	1/1:2,11:13:23.99:208,24,0	0/0:15,0:15:8.15:0,8,57	0/0:11,0:11:8.88:0,9,60	0/0:7,0:16:32.47:0,32,187	0/0:5,0:16:5.75:0,6,29	0/1:13,2:15:9.99:10,0,356	0/0:9,0:15:16.36:0,16,106	0/0:5,0:8:8.82:0,9,67	0/0:17,0:22:20.54:0,21,165	1/1:3,15:18:47.97:412,48,0	1/1:4,12:16:20.49:181,20,0	1/1:2,16:19:47.03:397,47,0	0/1:19,3:22:10.07:10,0,301	1/1:4,14:18:41.96:357,42,0	0/0:5,0:11:11.83:0,12,96	1/1:4,3:7:8.97:78,9,0
chr10	78492131	.	T	TA	5995.26	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-11.611;DP=471;FS=1.629;HRun=7;HaplotypeScore=50.4447;InbreedingCoeff=0.9122;MQ=73.82;MQ0=2;MQRankSum=2.278;QD=25.73;ReadPosRankSum=0.193;VQSLOD=5.1096;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.02:0,54,498	1/1:0,12:12:30.09:362,30,0	0/1:18,0:10:11.61:12,0,52	0/0:20,0:14:10.74:0,11,96	1/1:0,30:30:83.90:921,84,0	0/0:20,0:20:48.06:0,48,457	0/0:5,0:5:15.01:0,15,139	1/1:3,25:28:75.03:802,75,0	0/0:13,0:13:39.05:0,39,370	1/1:4,17:21:51.13:583,51,0	1/1:4,2:21:43.60:263,44,0	0/0:11,0:11:23.99:0,24,214	0/0:18,0:18:54.07:0,54,515	0/0:15,0:15:38.92:0,39,342	0/0:12,0:12:33.03:0,33,309	1/1:1,7:8:18.05:217,18,0	0/0:26,0:26:78.06:0,78,731	0/0:15,0:15:39.06:0,39,376	1/1:0,14:14:42.10:478,42,0	1/1:1,19:20:56.87:584,57,0	1/1:1,5:6:9.03:109,9,0	0/0:7,0:7:21.01:0,21,196	0/0:18,0:18:51.02:0,51,464	0/0:9,0:9:24.04:0,24,231	1/1:0,29:29:75.23:905,75,0	0/0:18,0:18:51.06:0,51,483	1/1:2,24:26:63.19:760,63,0	0/0:11,0:11:32.97:0,33,291
chr10	78494536	.	G	GGTC	14513.75	PASS	AB=0.571;AC=23;AF=0.411;AN=56;BaseQRankSum=-13.453;DP=583;FS=0.655;HRun=0;HaplotypeScore=74.4720;InbreedingCoeff=0.9247;MQ=85.62;MQ0=0;MQRankSum=-3.764;QD=65.67;ReadPosRankSum=3.942;VQSLOD=6.7120;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.20:0,57,1050	0/0:5,0:5:15.05:0,15,280	0/0:27,0:27:78.19:0,78,1317	0/0:11,0:11:30.10:0,30,515	0/0:30,0:30:87.30:0,87,1622	0/0:25,0:25:75.24:0,75,1366	0/0:14,0:14:42.14:0,42,783	0/0:30,0:30:90.29:0,90,1592	1/1:0,13:13:39.13:960,39,0	0/0:22,0:22:66.23:0,66,1216	0/0:32,0:32:90.30:0,90,1648	1/1:1,10:12:30.10:719,30,0	1/1:1,12:15:39.13:955,39,0	1/1:0,15:16:45.15:1107,45,0	1/1:0,23:23:66.23:1624,66,0	0/0:21,0:21:63.22:0,63,1174	1/1:1,15:18:45.15:1108,45,0	1/1:0,18:19:54.19:1327,54,0	0/0:13,0:13:39.13:0,39,695	0/0:33,0:33:96.30:0,96,1724	0/0:21,0:21:63.16:0,63,1107	1/1:0,18:21:54.19:1331,54,0	1/1:2,22:25:66.23:1620,66,0	1/1:0,19:21:57.20:1403,57,0	0/0:22,0:22:66.23:0,66,1227	0/1:8,22:32:15.61:1917,0,16	0/0:37,0:37:99:0,111,2060	1/1:0,6:6:18.06:443,18,0
chr10	78495696	.	ATTTG	A	4374.11	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.117;DP=780;FS=0.414;HRun=0;HaplotypeScore=156.0013;InbreedingCoeff=0.9484;MQ=70.57;MQ0=0;MQRankSum=1.747;QD=33.91;ReadPosRankSum=5.512;VQSLOD=4.7796;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,100,2395	0/0:8,0:8:12.04:0,12,280	0/0:32,0:31:33.08:0,33,693	0/0:20,0:19:33.08:0,33,700	0/0:27,0:27:60.20:0,60,1432	0/0:33,0:32:78.27:0,78,1865	0/0:23,0:23:63.20:0,63,1472	0/0:31,0:31:60.17:0,60,1303	1/1:2,24:26:69.24:1131,69,0	0/0:26,0:25:54.17:0,54,1240	0/0:22,0:22:42.13:0,42,968	0/0:17,0:33:66.22:0,66,1124	0/0:11,0:30:60.20:0,60,1046	1/1:5,26:31:72.25:1180,72,0	1/1:9,26:35:66.23:1081,66,0	0/0:26,1:27:11.03:0,11,1289	1/1:13,24:37:59.92:983,60,0	0/0:11,0:15:22.32:0,22,412	0/0:28,0:28:45.08:0,45,975	0/0:41,3:44:7.02:0,7,2197	0/0:26,0:26:60.20:0,60,1461	0/0:11,0:33:84.28:0,84,1421	0/0:13,0:33:88.54:0,89,1524	0/0:14,0:21:24.06:0,24,446	0/0:21,0:21:54.19:0,54,1314	0/0:13,0:29:66.07:0,66,1129	0/0:31,0:31:60.21:0,60,1460	0/0:3,0:9:12.04:0,12,211
chr10	78496587	.	C	CTGATGA	2877.50	PASS	AB=0.786;AC=28;AF=0.609;AN=46;BaseQRankSum=-3.143;DP=683;FS=7.816;HRun=0;HaplotypeScore=186.1554;InbreedingCoeff=0.3628;MQ=68.25;MQ0=7;MQRankSum=-0.608;QD=7.02;ReadPosRankSum=-0.762;VQSLOD=2.0151;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:60.09:0,60,1079	1/1:1,2:3:6.02:167,6,0	./.	./.	0/1:13,4:17:0:0,0,0	0/1:14,0:23:2.11:43,0,2	0/1:22,0:27:42.84:43,0,47	./.	1/1:37,1:39:19.23:307,19,0	1/1:26,0:26:21.69:359,22,0	1/1:11,1:12:3.01:71,3,0	0/0:20,0:27:10.24:0,10,200	0/0:21,0:33:33.74:0,34,406	1/1:38,0:40:18.02:293,18,0	1/1:34,0:39:24.07:491,24,0	1/1:22,6:28:14.98:398,15,0	1/1:25,0:25:2.69:74,3,0	0/0:19,0:18:0.46:0,0,2	1/1:19,0:19:6.01:99,6,0	./.	1/1:32,11:46:2.94:18,3,0	0/0:14,0:15:3.01:0,3,42	./.	0/0:16,0:26:2.96:0,3,42	0/1:7,1:9:0:0,0,0	0/1:17,0:19:31.26:134,0,31	1/1:14,5:24:21.34:436,21,0	0/1:5,0:12:38.65:89,0,39
chr10	78496667	.	GTGGTGGTGGTGCTGGTGC	G	2219.08	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.359;DP=573;FS=11.626;HRun=0;HaplotypeScore=227.8604;InbreedingCoeff=0.8363;MQ=49.07;MQ0=19;MQRankSum=-6.669;QD=16.81;ReadPosRankSum=0.163;VQSLOD=1.4054;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:60.01:0,60,2331	0/0:13,0:12:23.76:0,24,442	0/0:25,0:7:7.96:0,8,75	0/0:13,0:7:5.14:0,5,68	0/0:9,0:9:17.88:0,18,714	0/0:18,0:17:30.07:0,30,1634	0/0:32,0:32:90.13:0,90,3058	0/0:21,0:16:33.86:0,34,375	1/1:0,28:28:15.05:489,15,0	0/0:23,0:22:48.15:0,48,1957	0/0:8,0:8:17.96:0,18,759	0/0:32,0:32:53.64:0,54,1497	0/0:35,0:35:37.98:0,38,1574	1/1:2,41:43:5.49:313,5,0	1/1:0,35:35:27.04:770,27,0	0/0:20,0:19:48.07:0,48,2132	1/1:4,18:22:18.53:795,19,0	0/0:17,0:15:27.83:0,28,472	0/0:17,0:13:30.03:0,30,1041	0/0:8,0:7:18.06:0,18,706	0/0:40,0:36:48.79:0,49,1800	1/1:4,0:4:0.43:1,0,0	0/0:8,0:8:12.01:0,12,204	0/0:26,0:24:35.46:0,35,960	0/0:12,0:12:27.08:0,27,1222	0/0:15,0:15:6.88:0,7,548	0/0:18,0:18:39.53:0,40,1715	0/0:5,0:5:14.92:0,15,297
chr10	78496673	.	GTGGTGC	G	2246.33	PASS	AB=0.778;AC=22;AF=0.407;AN=54;BaseQRankSum=5.173;DP=554;FS=3.376;HRun=0;HaplotypeScore=132.4271;InbreedingCoeff=0.8096;MQ=50.12;MQ0=23;MQRankSum=-8.283;QD=8.57;ReadPosRankSum=2.200;VQSLOD=2.5657;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:42.03:0,42,772	0/0:5,0:12:11.84:0,12,124	./.	0/0:11,0:6:3:0,3,29	0/0:10,0:11:18.01:0,18,240	0/0:15,0:14:24.05:0,24,542	0/0:34,0:34:60:0,60,780	0/0:18,0:13:2.98:0,3,21	1/1:28,0:28:11.87:98,12,0	0/0:18,0:19:42.02:0,42,671	0/0:7,0:9:11.96:0,12,182	1/1:9,22:31:32.88:392,33,0	1/1:13,19:31:38.72:620,39,0	1/1:42,0:42:15.83:95,16,0	1/1:35,0:35:20.53:123,21,0	0/0:17,0:18:39.05:0,39,624	1/1:18,0:18:17.84:180,18,0	0/1:14,0:12:5.97:117,0,6	0/0:17,0:13:21.03:0,21,318	0/0:7,0:7:17.95:0,18,219	0/0:41,0:37:39.09:0,39,525	0/1:1,4:5:0.11:0,0,0	1/1:5,4:8:5.83:33,6,0	1/1:24,3:25:31.82:374,32,0	0/0:13,0:13:24.04:0,24,310	1/1:16,0:16:27.02:331,27,0	0/0:17,0:19:38.99:0,39,531	1/1:5,0:5:6:84,6,0
chr10	78497319	.	TC	T	9325.36	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=17.299;DP=635;FS=2.085;HRun=3;HaplotypeScore=73.4850;InbreedingCoeff=0.9976;MQ=77.23;MQ0=0;MQRankSum=-1.269;QD=34.41;ReadPosRankSum=4.982;VQSLOD=5.3354;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.29:0,90,1274	0/0:5,0:5:15.05:0,15,216	0/0:17,0:17:46.40:0,46,652	0/0:14,1:14:33.09:0,33,454	0/0:33,0:33:96.31:0,96,1365	0/0:27,0:27:78.26:0,78,1121	0/0:16,0:16:48.16:0,48,691	0/0:26,0:26:75.23:0,75,1032	1/1:0,25:25:72.23:892,72,0	0/0:32,0:32:87.26:0,87,1231	0/0:13,0:13:36.11:0,36,501	1/1:0,30:30:81.25:1004,81,0	1/1:0,28:28:75.23:923,75,0	1/1:0,23:23:63.20:781,63,0	1/1:1,26:27:75.24:930,75,0	0/0:26,0:26:78.26:0,78,1113	1/1:0,20:20:51.16:632,51,0	1/1:0,22:22:66.21:818,66,0	0/0:16,0:16:48.16:0,48,688	0/0:26,0:26:75.25:0,75,1080	0/0:21,0:21:63.20:0,63,888	1/1:0,20:20:60.19:744,60,0	1/1:1,20:21:60.19:744,60,0	1/1:1,21:23:57.18:706,57,0	0/0:30,0:30:90.30:0,90,1295	1/1:0,22:22:66.21:818,66,0	0/0:30,0:30:87.28:0,87,1232	1/1:0,10:10:27.08:335,27,0
chr10	78498128	.	GTATATATATATA	G	2636.93	PASS	AB=0.583;AC=15;AF=0.288;AN=52;BaseQRankSum=5.509;DP=297;FS=3.456;HRun=0;HaplotypeScore=97.1422;InbreedingCoeff=0.6192;MQ=57.16;MQ0=2;MQRankSum=-7.815;QD=22.54;ReadPosRankSum=4.663;VQSLOD=2.1230;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:12.03:0,12,388	0/0:4,0:4:6.02:0,6,316	0/0:12,0:6:3.47:0,3,27	0/0:16,0:6:4.83:0,5,57	0/0:7,0:7:9.03:0,9,403	0/0:9,0:11:27.09:0,27,1411	./.	0/0:20,0:30:60.20:0,60,1997	1/1:4,23:27:38.92:1288,39,0	0/0:8,0:8:9.03:0,9,441	0/0:3,0:7:12.04:0,12,540	1/1:2,0:9:4.98:13,5,0	0/1:6,0:21:42.56:43,0,85	1/1:3,10:15:21.07:699,21,0	1/1:5,14:19:12.04:426,12,0	0/0:5,0:5:9.03:0,9,299	1/1:6,10:16:9.03:319,9,0	0/0:4,0:8:7.14:0,7,143	0/0:10,0:11:18.06:0,18,632	./.	0/0:7,0:7:9.03:0,9,367	1/1:3,0:5:1.25:3,1,0	0/0:4,0:6:3:0,3,25	1/1:5,0:5:2.22:7,2,0	0/0:4,0:5:12.04:0,12,642	0/0:7,0:13:27.07:0,27,608	0/0:7,0:12:18.06:0,18,825	0/0:2,0:6:8.99:0,9,205
chr10	78498482	.	TCCTCC	T	1846.24	PASS	AB=1.000;AC=15;AF=0.300;AN=50;BaseQRankSum=3.511;DP=303;FS=36.803;HRun=0;HaplotypeScore=59.2897;InbreedingCoeff=0.6333;MQ=91.27;MQ0=7;MQRankSum=-1.226;QD=15.13;ReadPosRankSum=1.320;VQSLOD=0.8085;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:12.04:0,12,345	0/0:2,0:2:3.01:0,3,86	0/1:46,0:22:17.47:17,0,89	0/0:67,0:25:22.37:0,22,292	./.	./.	0/0:6,0:6:15.03:0,15,296	0/0:12,0:12:6.02:0,6,128	1/1:6,8:14:18.06:338,18,0	0/0:5,0:5:6.02:0,6,173	./.	0/0:5,0:5:12.04:0,12,300	0/0:11,0:11:12.01:0,12,281	1/1:6,11:17:30.10:563,30,0	1/1:6,13:19:21.07:391,21,0	0/0:7,0:7:9.03:0,9,213	1/1:1,9:10:15.05:281,15,0	1/1:2,5:7:12.04:225,12,0	0/0:8,0:8:18.04:0,18,409	0/0:4,0:4:2.98:0,3,21	0/0:6,0:6:9.03:0,9,215	0/0:2,0:2:3.01:0,3,66	0/0:4,0:4:2.96:0,3,19	0/0:13,0:13:15.05:0,15,400	0/0:4,0:4:3.01:0,3,42	1/1:2,3:5:9.03:145,9,0	0/0:12,0:12:15.05:0,15,365	1/1:0,3:3:3.01:56,3,0
chr10	78499413	.	G	GA	1354.87	PASS	AB=0.699;AC=11;AF=0.196;AN=56;BaseQRankSum=-0.821;DP=582;FS=1.050;HRun=9;HaplotypeScore=63.1463;InbreedingCoeff=0.6525;MQ=59.76;MQ0=19;MQRankSum=-0.250;QD=11.20;ReadPosRankSum=3.138;VQSLOD=2.6887;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:98.97:0,99,859	0/0:8,0:7:17.95:0,18,149	0/0:20,0:10:22.79:0,23,169	0/0:15,0:8:12.05:0,12,90	0/0:23,0:23:53.95:0,54,460	0/0:16,0:16:47.97:0,48,413	0/0:23,0:22:52.97:0,53,441	0/0:24,0:24:50.97:0,51,442	0/1:7,3:7:37.09:76,0,37	0/0:28,0:28:80.93:0,81,692	0/0:18,1:18:11.81:0,12,331	0/0:14,0:14:38.99:0,39,338	0/0:23,0:22:53.96:0,54,468	0/1:2,8:10:5:178,0,5	1/1:1,19:21:33.08:357,33,0	0/0:15,0:14:38.74:0,39,338	1/1:4,24:28:60.08:646,60,0	0/1:19,0:22:5.07:124,0,5	0/0:23,0:21:35.16:0,35,423	0/0:22,0:22:59.97:0,60,517	0/0:21,0:21:53.99:0,54,468	0/0:24,0:24:56.96:0,57,491	0/0:21,0:19:53.99:0,54,467	0/0:36,0:36:80.01:0,80,682	0/0:20,0:21:49.97:0,50,422	1/1:4,0:21:17.66:129,18,0	0/0:23,0:22:59.99:0,60,520	1/1:4,0:4:0.88:3,1,0
chr10	78499552	.	AC	A	1161.51	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.207;DP=538;FS=0.568;HRun=8;HaplotypeScore=61.7908;InbreedingCoeff=0.9035;MQ=78.68;MQ0=0;MQRankSum=0.779;QD=22.34;ReadPosRankSum=3.136;VQSLOD=4.0508;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.23:0,84,990	0/0:10,0:10:27.08:0,27,323	0/0:17,0:17:24.87:0,25,284	0/0:23,0:23:26.08:0,26,324	0/0:15,0:15:42.12:0,42,495	0/0:24,0:24:66.20:0,66,797	0/0:28,0:28:72.22:0,72,869	0/0:29,0:29:63.12:0,63,702	0/0:11,0:11:33.07:0,33,366	0/0:20,0:20:51.13:0,51,596	0/0:10,0:10:19.63:0,20,316	0/0:19,0:19:51.14:0,51,603	0/0:19,0:19:51.12:0,51,586	0/0:24,0:24:72.19:0,72,837	0/0:24,0:24:69.21:0,69,833	0/0:18,0:18:51.08:0,51,588	0/0:16,0:17:45:0,45,522	1/1:2,21:23:57.09:550,57,0	0/0:14,1:15:7.19:0,7,366	0/0:20,2:22:2.23:0,2,593	0/0:24,0:25:69.05:0,69,788	0/0:13,0:13:39.09:0,39,444	0/0:18,0:18:54.13:0,54,627	0/0:16,0:16:44.59:0,45,482	0/0:20,0:20:57.16:0,57,676	1/1:0,18:18:54.09:521,54,0	0/0:16,0:16:39.12:0,39,471	1/1:2,9:11:24.03:232,24,0
chr10	78500892	.	A	ATT	1410.57	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-2.063;DP=560;FS=8.643;HRun=8;HaplotypeScore=71.9179;InbreedingCoeff=0.9962;MQ=72.77;MQ0=1;MQRankSum=-0.908;QD=24.75;ReadPosRankSum=1.966;VQSLOD=2.4723;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:81.19:0,81,903	0/0:16,0:16:36.05:0,36,389	0/0:24,0:17:27.04:0,27,297	0/0:14,0:12:21.05:0,21,232	0/0:18,0:18:48.11:0,48,526	0/0:17,0:17:45.09:0,45,501	0/0:19,0:19:42.02:0,42,440	0/0:29,0:29:66.09:0,66,716	0/0:9,0:9:24.06:0,24,267	0/0:25,0:25:60.15:0,60,669	0/0:11,0:11:30.08:0,30,334	0/0:11,0:11:27.07:0,27,300	0/0:17,0:17:45.12:0,45,500	0/0:21,0:21:45.10:0,45,502	0/0:31,0:31:87.23:0,87,969	0/0:24,0:24:60.12:0,60,658	0/0:27,0:27:64.12:0,64,762	1/1:3,0:25:53.33:205,53,0	0/0:30,0:27:66.13:0,66,726	0/0:30,0:30:81.20:0,81,901	0/0:11,0:11:30.08:0,30,334	0/0:21,0:21:54.12:0,54,602	0/0:17,0:17:42.10:0,42,467	0/0:13,0:13:33.07:0,33,367	0/0:16,0:16:42.10:0,42,459	1/1:1,21:23:60.16:920,60,0	0/0:20,0:19:60.16:0,60,669	1/1:0,9:9:27.09:429,27,0
chr10	78501714	.	GT	G	2154.63	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.449;DP=660;FS=4.517;HRun=4;HaplotypeScore=92.1461;InbreedingCoeff=0.9835;MQ=72.43;MQ0=0;MQRankSum=-10.880;QD=27.98;ReadPosRankSum=1.869;VQSLOD=3.3630;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1385	0/0:17,0:17:51.17:0,51,714	0/0:31,0:27:69.18:0,69,909	0/0:21,0:19:49.03:0,49,631	0/0:39,0:39:99:0,114,1560	0/0:18,0:18:54.18:0,54,756	0/0:18,0:18:54.17:0,54,731	0/0:32,0:32:96.30:0,96,1313	1/1:0,17:17:48.14:569,48,0	0/0:31,0:31:93.25:0,93,1262	0/0:24,0:24:72.23:0,72,988	0/0:24,0:24:72.23:0,72,993	0/0:16,0:16:48.14:0,48,639	1/1:2,18:20:9.02:504,9,0	1/1:0,26:26:72.22:853,72,0	0/0:26,0:26:78.26:0,78,1092	1/1:0,14:14:33.10:385,33,0	0/0:25,0:25:71.64:0,72,946	0/0:15,0:15:42.13:0,42,567	0/0:22,0:22:66.22:0,66,924	0/0:26,0:26:78.24:0,78,1072	0/0:28,0:28:84.27:0,84,1151	0/0:23,0:23:69.22:0,69,949	0/0:20,0:20:60.19:0,60,821	0/0:23,0:23:69.23:0,69,965	0/0:24,0:24:69.23:0,69,966	0/0:33,0:32:93.31:0,93,1301	0/0:14,0:14:42.14:0,42,588
chr10	78501721	.	TTTTG	T	2372.14	PASS	AB=0.553;AC=7;AF=0.125;AN=56;BaseQRankSum=12.088;DP=685;FS=3.199;HRun=0;HaplotypeScore=136.7375;InbreedingCoeff=0.8382;MQ=68.13;MQ0=0;MQRankSum=-10.746;QD=30.03;ReadPosRankSum=0.927;VQSLOD=3.8484;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:87.30:0,87,2119	0/0:17,0:17:45.15:0,45,1099	0/0:33,0:29:59.79:0,60,1283	0/0:23,0:20:42.10:0,42,892	0/0:37,0:37:99:0,111,2739	0/0:19,0:19:54.18:0,54,1319	0/0:20,0:20:57.20:0,57,1367	0/0:33,0:33:66.20:0,66,1521	1/1:6,11:17:33.11:560,33,0	0/0:33,0:33:87.27:0,87,1991	0/0:23,0:23:66.23:0,66,1627	0/0:28,0:28:75.26:0,75,1802	0/0:16,0:16:45.15:0,45,1109	0/1:4,17:21:16.04:753,0,16	1/1:8,19:27:58.64:924,59,0	0/0:28,0:28:72.25:0,72,1765	1/1:9,5:14:18.05:283,18,0	0/0:29,0:29:75.24:0,75,1671	0/0:17,0:17:45.15:0,45,971	0/0:24,0:24:72.25:0,72,1777	0/0:25,0:25:75.26:0,75,1819	0/0:26,0:26:75.26:0,75,1851	0/0:24,0:24:69.24:0,69,1718	0/0:20,0:19:54.19:0,54,1337	0/0:22,0:22:57.20:0,57,1435	0/0:25,0:25:75.25:0,75,1784	0/0:32,0:31:90.31:0,90,2205	0/0:17,0:17:51.17:0,51,1200
chr10	78501905	.	TAA	T	3712.52	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.488;DP=696;FS=2.568;HRun=3;HaplotypeScore=86.1797;InbreedingCoeff=0.9914;MQ=88.90;MQ0=0;MQRankSum=-2.287;QD=40.80;ReadPosRankSum=1.030;VQSLOD=3.4172;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,2088	0/0:16,0:16:45.14:0,45,837	0/0:30,0:30:90.28:0,90,1622	0/0:21,0:21:56.98:0,57,1010	0/0:28,0:28:81.19:0,81,1488	0/0:36,0:36:99:0,108,2017	0/0:19,0:19:54.18:0,54,1017	0/0:37,0:37:99:0,111,2010	1/1:0,25:25:69.23:1054,69,0	0/0:24,0:24:72.23:0,72,1331	0/0:25,0:25:72.23:0,72,1356	0/0:33,0:33:99:0,99,1877	0/0:22,0:22:66.23:0,66,1275	1/1:2,21:23:60.20:916,60,0	1/1:0,24:24:72.24:1101,72,0	0/0:27,0:27:78.26:0,78,1461	1/1:1,18:19:42.14:642,42,0	0/0:13,0:13:39.13:0,39,753	0/0:24,0:24:69.24:0,69,1320	0/0:24,0:24:69.24:0,69,1324	0/0:27,0:27:81.27:0,81,1518	0/0:19,0:19:57.14:0,57,1017	0/0:21,0:21:63.22:0,63,1217	0/0:39,0:39:99:0,117,2190	0/0:17,0:17:48.16:0,48,897	0/0:27,0:27:81.26:0,81,1468	0/0:32,0:32:96.32:0,96,1815	0/0:4,0:4:12.04:0,12,221
chr10	78503878	.	AATG	A	2523.76	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=13.338;DP=769;FS=11.432;HRun=0;HaplotypeScore=114.4865;InbreedingCoeff=0.6966;MQ=58.46;MQ0=9;MQRankSum=-2.013;QD=8.19;ReadPosRankSum=2.312;VQSLOD=1.8645;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:60.10:0,60,967	0/0:10,0:10:24.07:0,24,399	0/0:44,0:22:30:0,30,373	0/0:37,0:22:19.84:0,20,275	0/0:31,0:31:46.10:0,46,726	0/0:33,0:33:78.19:0,78,1244	0/0:25,0:24:39.11:0,39,640	0/0:40,0:40:15.26:0,15,500	1/1:8,22:30:17.89:249,18,0	0/0:19,0:19:32.92:0,33,499	0/0:36,0:36:69.11:0,69,1072	1/1:38,0:38:6.44:290,6,0	0/1:20,0:20:0.20:119,0,0	1/1:10,20:30:30.10:415,30,0	1/1:4,24:28:36.06:498,36,0	0/0:26,0:26:51.09:0,51,766	1/1:5,16:21:18.06:249,18,0	1/1:8,0:18:4.77:122,5,0	0/0:19,0:16:27.04:0,27,439	0/0:35,0:35:66.17:0,66,1104	0/0:23,0:22:51.01:0,51,705	0/1:30,0:29:64.42:162,0,64	0/1:26,0:26:39:39,0,80	0/1:17,0:17:7.14:84,0,7	0/0:28,0:28:66.14:0,66,1077	1/1:11,0:27:13.70:260,14,0	0/0:26,0:26:18.75:0,19,963	1/1:1,0:22:32.77:238,33,0
chr10	78503906	.	ATGT	A	2137.82	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=13.904;DP=752;FS=17.209;HRun=0;HaplotypeScore=118.5178;InbreedingCoeff=0.4703;MQ=61.09;MQ0=9;MQRankSum=-1.608;QD=7.25;ReadPosRankSum=9.264;VQSLOD=0.2335;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.05:0,87,1239	0/0:8,0:8:21.05:0,21,367	0/0:40,0:23:56.94:0,57,542	0/0:38,0:27:47.75:0,48,645	0/0:23,0:23:60.07:0,60,833	0/0:37,0:37:96.12:0,96,1450	0/0:18,0:18:48.11:0,48,742	0/0:31,0:31:75.07:0,75,784	0/1:32,0:32:50.43:50,0,211	0/0:20,0:20:48.02:0,48,606	0/0:31,0:31:69.13:0,69,1077	1/1:2,39:41:51.17:765,51,0	1/1:1,20:21:21.07:316,21,0	0/1:24,0:24:41.11:122,0,41	0/1:32,0:32:99:129,0,147	0/0:22,0:22:48.06:0,48,707	0/1:23,0:23:70.34:70,0,83	0/0:19,0:19:20.01:0,20,151	0/0:20,0:18:50.91:0,51,638	0/0:33,0:32:85.36:0,85,1175	0/0:31,0:30:74.98:0,75,913	1/1:3,24:26:38.75:459,39,0	1/1:4,18:22:8.88:135,9,0	1/1:2,22:24:15.05:225,15,0	0/0:27,0:27:69.13:0,69,1101	0/1:25,0:25:12.61:13,0,216	0/0:26,0:26:60.52:0,61,1123	0/1:24,0:23:10.18:40,0,10
chr10	78505358	.	C	CT	1392.15	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-2.705;DP=623;FS=0.000;HRun=0;HaplotypeScore=96.6180;InbreedingCoeff=0.9910;MQ=73.57;MQ0=9;MQRankSum=-2.287;QD=38.67;ReadPosRankSum=2.637;VQSLOD=3.8479;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:93.14:0,93,1235	0/0:9,0:9:15.05:0,15,210	0/0:50,0:27:64.37:0,64,867	0/0:66,0:36:80.23:0,80,945	0/0:14,0:14:42.14:0,42,589	0/0:19,0:19:51.16:0,51,692	0/0:22,0:21:54.16:0,54,732	0/0:30,0:30:78.26:0,78,1090	0/0:20,0:20:51.08:0,51,687	0/0:15,0:15:39.13:0,39,535	0/0:16,0:16:39.13:0,39,543	0/0:26,0:26:72.09:0,72,980	0/0:16,0:16:32.99:0,33,408	0/0:29,0:29:75.25:0,75,1046	0/0:27,0:27:72.23:0,72,986	0/0:15,0:15:36.12:0,36,503	0/0:21,0:21:60.20:0,60,838	1/1:0,8:8:21.07:335,21,0	0/0:27,0:26:75.21:0,75,1004	0/0:27,0:27:75.25:0,75,1048	0/0:12,0:12:24.08:0,24,335	0/0:15,0:14:33.11:0,33,461	0/0:16,0:16:32.70:0,33,460	0/0:21,0:21:33.07:0,33,439	0/0:22,0:22:57.18:0,57,780	1/1:1,19:19:51.17:815,51,0	0/0:17,0:16:39.13:0,39,543	1/1:0,8:8:24.08:384,24,0
chr10	78505436	.	GAC	G	720.01	PASS	AB=0.616;AC=2;AF=0.037;AN=54;BaseQRankSum=7.767;DP=822;FS=1.582;HRun=0;HaplotypeScore=134.2664;InbreedingCoeff=-0.0358;MQ=54.28;MQ0=13;MQRankSum=-4.190;QD=18.00;ReadPosRankSum=-0.303;VQSLOD=3.9135;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,108,1974	0/0:12,0:12:33.10:0,33,587	0/0:31,0:9:18.89:0,19,222	0/0:48,0:17:29.05:0,29,438	0/0:29,0:29:62.99:0,63,1122	0/0:22,0:22:53.28:0,53,977	0/0:30,0:30:65.92:0,66,1114	0/0:52,0:50:99:0,141,2228	0/0:30,0:30:71.30:0,71,1482	0/0:33,0:33:93.09:0,93,1448	0/0:25,0:24:45.15:0,45,818	0/0:42,0:42:99:0,109,1810	0/0:33,0:33:84.06:0,84,1368	0/0:22,0:22:56.78:0,57,974	0/0:32,0:32:90.22:0,90,1513	0/0:27,0:27:63.09:0,63,1066	0/0:38,0:38:76.44:0,76,1720	0/1:7,12:20:78.33:435,0,78	0/0:26,0:17:48.15:0,48,822	0/0:30,0:30:78.27:0,78,1421	0/0:43,0:41:99:0,104,1675	0/0:13,0:12:15.05:0,15,275	0/0:27,0:27:53.98:0,54,962	0/0:43,0:43:99:0,99,1739	0/0:25,0:25:60.21:0,60,1091	0/1:8,12:17:24.44:374,0,24	0/0:22,0:22:56.93:0,57,901	./.
chr10	78505656	.	CAGAG	C	190.85	PASS	AB=0.750;AC=3;AF=0.060;AN=50;BaseQRankSum=5.523;DP=780;FS=7.050;HRun=0;HaplotypeScore=147.1072;InbreedingCoeff=0.5317;MQ=52.60;MQ0=29;MQRankSum=-5.112;QD=15.90;ReadPosRankSum=-0.581;VQSLOD=2.8058;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:43:97.18:0,97,2277	0/0:11,0:11:21.04:0,21,506	./.	./.	0/0:16,0:16:27.07:0,27,559	0/0:31,0:31:66.23:0,66,1716	0/0:33,0:32:57.63:0,58,1381	0/0:55,0:38:93.28:0,93,2097	0/0:32,1:33:52.98:0,53,2129	0/0:39,0:38:99:0,105,2333	0/0:24,0:22:51.15:0,51,1129	0/0:40,0:40:87.30:0,87,2206	0/0:30,0:30:75.24:0,75,1835	0/0:34,0:33:80.46:0,80,2018	0/0:28,0:28:60.20:0,60,1452	0/0:29,0:29:81.25:0,81,1978	0/0:33,0:32:67.77:0,68,1891	0/1:4,2:6:19.83:141,0,20	0/0:27,0:14:33.10:0,33,687	0/0:45,0:43:99:0,105,2296	0/0:47,0:46:96.30:0,96,2325	0/0:22,0:21:36.11:0,36,824	0/0:34,0:30:60.18:0,60,1359	0/0:47,0:48:63.08:0,63,1443	0/0:26,0:26:54.17:0,54,1258	1/1:4,2:5:5.18:143,5,0	0/0:25,0:25:69.19:0,69,1688	./.
chr10	78505680	.	C	CAT	125.10	PASS	AB=0.813;AC=2;AF=0.037;AN=54;BaseQRankSum=4.438;DP=809;FS=16.889;HRun=0;HaplotypeScore=128.8778;InbreedingCoeff=-0.0464;MQ=55.27;MQ0=14;MQRankSum=-4.294;QD=2.91;ReadPosRankSum=-0.277;VQSLOD=1.7126;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:99:0,108,1599	0/0:14,0:14:24.02:0,24,367	0/0:21,0:6:18.06:0,18,248	0/1:33,0:13:9.19:9,0,152	0/0:16,0:16:36.12:0,36,544	0/0:36,0:36:78.21:0,78,1118	0/0:35,0:35:86.94:0,87,1267	0/0:57,0:55:99:0,153,2172	0/0:38,0:38:99:0,99,1542	0/0:29,0:29:87.24:0,87,1263	0/0:25,0:24:42.13:0,42,622	0/0:41,0:41:75:0,75,1026	0/0:41,0:41:59.49:0,59,859	0/0:37,0:37:78.24:0,78,1145	0/0:30,0:30:60.16:0,60,855	0/0:32,0:32:90.29:0,90,1342	0/0:29,0:29:61.37:0,61,949	0/0:6,0:6:0.48:0,0,59	0/0:19,0:9:21.07:0,21,321	0/0:38,0:37:93.29:0,93,1380	0/0:44,0:43:98.70:0,99,1369	0/0:19,0:18:27.08:0,27,392	0/0:25,0:23:39.13:0,39,593	0/0:38,0:38:47.87:0,48,637	0/0:26,0:26:60.19:0,60,897	0/1:4,6:6:71.84:198,0,72	0/0:26,0:26:75.22:0,75,1109	./.
chr10	78505692	.	CAGAG	C	63.83	PASS	AB=0.773;AC=2;AF=0.037;AN=54;BaseQRankSum=4.345;DP=834;FS=6.058;HRun=0;HaplotypeScore=161.9742;InbreedingCoeff=-0.0392;MQ=55.75;MQ0=13;MQRankSum=-4.139;QD=3.55;ReadPosRankSum=-0.670;VQSLOD=2.1577;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,120,2837	0/0:17,0:17:33.57:0,34,828	0/0:32,0:8:23.36:0,23,345	0/0:46,0:21:16.88:0,17,325	0/0:18,0:18:33.10:0,33,810	0/0:30,0:30:78.20:0,78,1969	0/0:37,0:37:96.29:0,96,2264	0/0:57,0:56:99:0,156,3561	0/0:37,0:37:90.17:0,90,2265	0/0:36,0:36:99:0,105,2344	0/0:27,0:27:51.08:0,51,1193	0/0:39,0:39:63.22:0,63,1613	0/0:41,0:41:47.87:0,48,1070	0/0:32,0:32:50.80:0,51,1347	0/0:26,0:26:42.11:0,42,1019	0/0:36,0:36:99:0,102,2400	0/0:28,0:29:55.06:0,55,1184	0/1:4,3:7:96.83:97,0,129	0/0:16,0:9:24.07:0,24,590	0/0:38,0:37:84.23:0,84,1985	0/0:35,0:34:84.26:0,84,2087	0/0:20,0:18:24.08:0,24,646	0/0:29,0:28:33.09:0,33,746	0/0:31,0:30:33.11:0,33,824	0/0:27,0:27:60.18:0,60,1460	0/1:9,2:8:55.54:56,0,96	0/0:28,0:28:81.23:0,81,1867	./.
chr10	78505702	.	T	TAGAC	4376.66	PASS	AB=1.000;AC=10;AF=0.185;AN=54;BaseQRankSum=-2.251;DP=847;FS=2.124;HRun=0;HaplotypeScore=159.8979;InbreedingCoeff=0.7404;MQ=54.25;MQ0=12;MQRankSum=0.557;QD=29.98;ReadPosRankSum=2.155;VQSLOD=5.1076;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,102,1716	0/0:17,0:17:32.58:0,33,508	0/0:38,0:7:8.92:0,9,92	0/0:51,0:23:14.07:0,14,216	0/0:20,0:20:32.45:0,32,489	0/0:31,0:31:72.16:0,72,1141	0/0:34,0:34:73.57:0,74,1218	0/0:60,0:59:99:0,132,2066	1/1:19,21:40:84.24:1786,84,0	0/0:38,0:38:96.32:0,96,1619	0/0:27,0:26:36.12:0,36,623	0/0:38,0:38:45.03:0,45,702	0/0:37,0:37:22.78:0,23,371	1/1:14,19:33:42.02:868,42,0	1/1:13,16:29:38.93:783,39,0	0/0:36,0:36:99:0,105,1757	1/1:15,12:27:45.24:896,45,0	0/1:6,0:6:36.77:37,0,44	0/0:19,0:12:24.08:0,24,413	0/0:40,0:38:78.21:0,78,1254	0/0:35,0:34:76.55:0,77,1281	0/0:25,0:23:21.04:0,21,310	0/0:24,0:24:12.04:0,12,209	0/0:26,0:25:11.86:0,12,208	0/0:24,0:24:45.13:0,45,736	0/1:11,0:8:7.47:7,0,52	0/0:30,0:30:84.25:0,84,1385	./.
chr10	78505710	.	CAGAG	C	974.39	PASS	AB=0.836;AC=6;AF=0.111;AN=54;BaseQRankSum=5.899;DP=851;FS=13.630;HRun=0;HaplotypeScore=172.7799;InbreedingCoeff=-0.1290;MQ=53.29;MQ0=11;MQRankSum=-0.430;QD=6.37;ReadPosRankSum=-2.406;VQSLOD=1.7181;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,120,2854	0/0:16,0:16:33.52:0,34,773	0/0:32,0:5:11.85:0,12,135	0/0:48,0:21:7.97:0,8,346	0/0:20,0:20:38.43:0,38,846	0/0:33,0:33:84.21:0,84,1902	0/0:33,0:33:79.61:0,80,1928	0/0:65,0:62:99:0,162,3390	0/1:40,1:42:99:361,0,616	0/0:39,0:37:99:0,108,2596	0/0:28,0:27:48.12:0,48,1057	0/0:38,0:38:45.39:0,45,946	0/0:34,0:34:23.80:0,24,471	0/1:31,2:33:99:170,0,393	0/1:27,3:30:82.16:82,0,489	0/0:38,0:38:99:0,114,2750	0/1:28,2:30:99:136,0,638	0/1:4,3:7:50.05:86,0,50	0/0:20,0:11:27.08:0,27,671	0/0:40,0:38:87.24:0,87,1994	0/0:40,0:38:94.64:0,95,2227	0/0:25,0:24:21.04:0,21,453	0/0:22,0:22:12.04:0,12,266	0/0:22,0:22:12.04:0,12,324	0/0:24,0:24:48.15:0,48,1237	0/1:2,9:8:19.38:262,0,19	0/0:33,0:33:96.25:0,96,2203	./.
chr10	78505754	.	CAG	C	2354.26	PASS	AB=0.917;AC=17;AF=0.327;AN=52;BaseQRankSum=9.596;DP=790;FS=0.000;HRun=0;HaplotypeScore=119.8701;InbreedingCoeff=0.6445;MQ=52.18;MQ0=18;MQRankSum=0.045;QD=9.05;ReadPosRankSum=2.832;VQSLOD=2.8536;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:90.30:0,90,1466	0/1:10,1:11:8.26:8,0,337	0/0:26,0:2:4.88:0,5,20	0/0:45,0:6:2.68:0,3,9	0/0:23,0:23:39.12:0,39,607	0/0:27,1:28:34.72:0,35,1053	0/0:31,0:32:23.01:0,23,863	0/0:62,0:46:99:0,100,1449	1/1:7,24:31:57.03:710,57,0	0/0:28,2:30:3.20:0,3,1046	0/0:27,0:26:36.12:0,36,570	1/1:35,0:35:8.39:47,8,0	1/1:34,0:34:5.68:39,6,0	1/1:6,29:35:56.95:713,57,0	1/1:3,23:26:32.73:412,33,0	0/0:35,0:35:93.30:0,93,1502	1/1:9,17:25:41.97:485,42,0	0/1:4,0:5:8.87:9,0,27	0/0:25,1:15:1.62:0,2,534	0/0:38,0:36:75.26:0,75,1228	0/0:33,0:31:34.72:0,35,1079	./.	0/1:28,0:28:0.01:0,0,0	1/1:28,1:28:3.62:104,4,0	0/0:22,0:22:36.07:0,36,540	0/0:6,0:4:8.91:0,9,88	0/0:32,0:32:90.25:0,90,1408	./.
chr10	78505781	.	ATG	A	60.72	PASS	AB=0.661;AC=2;AF=0.037;AN=54;BaseQRankSum=5.049;DP=855;FS=1.308;HRun=0;HaplotypeScore=155.1569;InbreedingCoeff=-0.0503;MQ=61.03;MQ0=26;MQRankSum=-1.895;QD=8.67;ReadPosRankSum=-0.612;VQSLOD=3.4067;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1881	0/0:13,0:13:36.11:0,36,671	0/0:58,1:15:21.67:0,22,413	0/0:90,4:26:2.80:0,3,198	0/0:31,0:30:51.11:0,51,972	0/0:23,0:23:66.22:0,66,1230	0/0:32,0:32:78.25:0,78,1563	0/0:56,0:55:99:0,159,3125	0/0:31,0:31:81.28:0,81,1599	0/0:41,0:41:99:0,123,2383	0/0:20,0:20:45.62:0,46,872	0/0:36,0:36:40.90:0,41,715	0/0:25,0:24:22.71:0,23,349	0/0:39,0:39:90.18:0,90,1763	0/0:29,0:29:63.21:0,63,1255	0/0:34,1:35:99:0,99,2021	0/0:28,1:28:74.79:0,75,1305	0/1:1,3:4:51.81:89,0,52	0/0:25,0:23:65.72:0,66,1265	0/0:38,0:38:99:0,102,1988	0/0:29,2:31:87.28:0,87,1702	0/0:18,0:18:9.03:0,9,181	0/0:26,0:26:8.73:0,9,159	0/0:30,1:30:36.08:0,36,673	0/0:18,0:18:48.08:0,48,893	0/1:2,1:3:51.99:60,0,52	0/0:33,0:33:99:0,99,1955	./.
chr10	78506014	.	G	GAC	172.28	PASS	AB=0.750;AC=3;AF=0.060;AN=50;BaseQRankSum=5.791;DP=661;FS=18.667;HRun=0;HaplotypeScore=110.3156;InbreedingCoeff=0.4299;MQ=52.07;MQ0=17;MQRankSum=-5.713;QD=12.31;ReadPosRankSum=-1.943;VQSLOD=1.7328;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:37:99:0,99,1478	0/0:9,0:9:24.08:0,24,367	./.	./.	0/0:20,0:20:43.39:0,43,643	0/0:34,0:34:59.38:0,59,1319	0/0:27,0:26:66.09:0,66,998	0/0:60,0:53:99:0,147,2118	0/0:27,0:27:51.64:0,52,772	0/0:29,0:27:77.05:0,77,1114	0/0:15,0:15:30.03:0,30,457	0/0:25,0:25:21.03:0,21,279	0/0:19,0:19:7.22:0,7,216	0/0:27,0:27:66.14:0,66,1010	0/0:28,0:28:60.20:0,60,918	0/0:23,0:23:54.18:0,54,823	0/0:20,0:20:44.78:0,45,627	./.	0/0:22,0:15:42.09:0,42,572	0/0:33,0:32:81.28:0,81,1236	0/0:61,0:61:99:0,133,1992	0/0:24,0:22:21.07:0,21,321	0/0:17,0:17:15.03:0,15,205	0/0:20,0:17:24.06:0,24,344	0/0:22,0:22:63.20:0,63,941	0/1:8,4:12:44.07:222,0,44	0/0:34,0:34:99:0,99,1506	1/1:0,2:2:3.01:41,3,0
chr10	78506030	.	GAGAGACAGAGAGAC	G	465.43	PASS	AB=1.000;AC=12;AF=0.231;AN=52;BaseQRankSum=7.103;DP=646;FS=0.000;HRun=0;HaplotypeScore=237.5227;InbreedingCoeff=0.6162;MQ=51.53;MQ0=17;MQRankSum=-6.051;QD=4.35;ReadPosRankSum=-3.411;VQSLOD=1.9871;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:72.22:0,72,2780	0/0:11,0:11:30.10:0,30,1015	./.	./.	0/0:23,0:22:39.08:0,39,1430	0/0:28,0:28:63.19:0,63,2796	0/0:26,0:25:54.64:0,55,1836	0/0:59,0:51:99:0,114,2957	0/0:24,0:24:14.75:0,15,961	0/0:30,0:28:59.26:0,59,2531	0/0:15,0:14:23.84:0,24,776	1/1:4,22:26:10.86:315,11,0	1/1:7,13:19:8.96:105,9,0	0/0:30,0:30:51.16:0,51,2381	0/0:32,0:32:51.17:0,51,2134	0/0:22,0:22:42.14:0,42,1783	0/0:17,0:17:27.56:0,28,914	0/0:1,0:1:3.01:0,3,56	0/0:28,0:20:48.16:0,48,1820	0/0:33,0:32:66.20:0,66,2877	0/0:47,0:48:83.86:0,84,3913	1/1:7,15:20:2.36:6,2,0	1/1:3,7:10:0.84:2,1,0	1/1:15,1:14:9.02:116,9,0	0/0:27,0:27:56.13:0,56,2499	0/1:10,0:10:45.66:46,0,80	0/0:36,0:36:72.18:0,72,3053	0/1:3,0:3:12.03:19,0,12
chr10	78506084	.	GAGAGAC	G	3186.70	PASS	AB=0.989;AC=21;AF=0.375;AN=56;BaseQRankSum=10.959;DP=718;FS=22.138;HRun=0;HaplotypeScore=179.9664;InbreedingCoeff=-0.2807;MQ=49.64;MQ0=16;MQRankSum=-7.821;QD=7.00;ReadPosRankSum=-3.610;VQSLOD=0.6443;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:73.80:0,74,1582	1/1:9,0:9:12.84:153,13,0	0/0:55,0:15:8.79:0,9,164	0/0:74,0:21:28.43:0,28,282	0/1:25,0:24:99:171,0,126	0/0:19,0:19:38.99:0,39,648	0/0:28,0:28:72.07:0,72,1476	0/1:51,0:48:99:181,0,468	1/1:18,0:18:5.36:22,5,0	0/1:31,0:31:99:463,0,221	0/1:18,1:18:99:103,0,105	0/1:28,0:28:40.30:40,0,68	0/1:20,0:19:61.71:62,0,84	0/1:26,1:27:66.51:67,0,113	0/1:22,0:22:18.16:18,0,31	0/1:29,0:29:21.71:633,0,22	0/1:16,0:16:40.24:40,0,53	0/0:3,0:2:5.92:0,6,39	0/1:24,0:22:99:268,0,199	0/1:20,1:20:99:211,0,127	0/1:32,0:32:96.11:96,0,250	0/0:18,0:18:0.87:0,1,21	0/0:15,0:15:5.80:0,6,42	1/1:10,0:11:1.14:3,1,0	0/1:31,1:32:99:243,0,300	0/0:16,0:14:13.79:0,14,228	0/1:40,0:40:99:573,0,225	0/0:2,0:2:4.26:0,4,70
chr10	78506090	.	CAGAGAG	C	5706.24	PASS	AB=0.979;AC=25;AF=0.446;AN=56;BaseQRankSum=2.634;DP=717;FS=1.843;HRun=0;HaplotypeScore=174.7970;InbreedingCoeff=0.4893;MQ=50.67;MQ0=16;MQRankSum=-4.043;QD=14.48;ReadPosRankSum=1.730;VQSLOD=4.3595;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:29:52.87:0,53,1387	1/1:2,6:8:15.03:247,15,0	0/0:51,0:14:8.97:0,9,101	0/0:77,0:21:4.34:0,4,87	1/1:11,15:25:6.21:284,6,0	0/0:17,0:18:24.07:0,24,597	0/0:23,0:28:45.15:0,45,1194	1/1:28,18:43:35.51:598,36,0	0/0:1,0:21:4.40:0,4,14	1/1:11,16:28:45.15:866,45,0	1/1:12,7:19:10:185,10,0	0/1:29,0:29:7.45:7,0,20	0/1:20,0:19:9.21:9,0,37	0/1:3,0:24:38.33:38,0,76	0/0:2,0:26:7.36:0,7,22	1/1:5,23:30:50.29:978,50,0	0/1:1,0:14:22.21:22,0,95	0/0:3,0:2:3.01:0,3,37	1/1:12,10:20:7.40:515,7,0	1/1:11,9:20:18.72:327,19,0	0/1:31,3:35:26.32:256,0,26	0/0:19,0:19:6.48:0,6,83	0/0:17,0:17:8.66:0,9,70	0/0:11,0:11:2.74:0,3,22	1/1:19,12:31:20.63:433,21,0	0/0:19,0:17:32.96:0,33,472	1/1:17,19:40:48.70:940,49,0	0/0:4,0:4:8.49:0,8,114
chr10	78506858	.	A	ATG	7111.43	PASS	AB=0.652;AC=24;AF=0.429;AN=56;BaseQRankSum=-11.563;DP=727;FS=5.241;HRun=0;HaplotypeScore=110.0103;InbreedingCoeff=0.8353;MQ=64.54;MQ0=16;MQRankSum=-0.412;QD=21.23;ReadPosRankSum=-1.334;VQSLOD=4.8769;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:67.42:0,67,1065	0/1:8,5:13:3.52:383,0,4	0/0:35,0:8:5.97:0,6,128	0/0:32,0:15:19.53:0,20,161	1/1:7,20:26:38.87:592,39,0	0/0:19,0:20:47.57:0,48,532	0/0:26,0:27:65.34:0,65,701	1/1:16,20:36:24.65:783,25,0	0/0:5,0:19:19.84:0,20,98	1/1:9,13:22:39.12:592,39,0	1/1:13,7:20:44.68:641,45,0	0/0:25,0:27:62.99:0,63,709	0/0:26,0:27:65.91:0,66,759	0/0:2,0:23:45.41:0,45,223	0/0:2,0:32:39.73:0,40,195	1/1:5,23:28:42.14:678,42,0	0/0:2,0:22:39.73:0,40,195	0/0:27,0:27:40.31:0,40,169	1/1:15,5:20:39.02:548,39,0	1/1:8,13:21:27.09:436,27,0	1/1:11,42:54:29.82:980,30,0	0/0:13,0:13:27.08:0,27,327	0/0:21,0:21:33.10:0,33,398	0/0:28,0:29:72.05:0,72,850	0/1:7,18:25:36.67:448,0,37	1/1:24,2:29:23.51:327,24,0	1/1:8,26:33:42.14:678,42,0	1/1:5,0:6:3:26,3,0
chr10	78506874	.	GTC	G	1156.32	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=1.167;DP=735;FS=0.419;HRun=0;HaplotypeScore=119.7620;InbreedingCoeff=0.0621;MQ=62.24;MQ0=18;MQRankSum=-0.134;QD=4.53;ReadPosRankSum=-4.615;VQSLOD=1.0353;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:77.26:0,77,1632	0/1:12,0:12:58.76:59,0,194	0/1:51,0:14:4.71:5,0,155	0/1:39,0:19:27.70:28,0,215	0/0:26,0:25:47.55:0,48,466	0/0:22,0:22:6.45:0,6,670	0/0:28,0:28:41.83:0,42,998	0/1:30,0:30:99:182,0,394	0/0:16,0:16:17.07:0,17,72	0/1:20,0:20:71.94:72,0,344	0/1:18,0:18:32.47:32,0,371	0/0:28,0:28:36.64:0,37,1023	0/0:27,0:27:37.92:0,38,906	0/0:25,0:25:26.46:0,26,160	0/0:37,0:37:28.42:0,28,203	0/0:32,0:32:56.87:0,57,661	0/0:26,0:26:24.56:0,25,170	1/1:2,23:25:45.11:637,45,0	0/1:18,0:18:59.27:59,0,289	0/0:17,0:17:38.82:0,39,410	0/0:56,0:56:83.90:0,84,935	0/0:14,0:14:24.59:0,25,415	0/1:12,0:12:3.54:4,0,330	0/0:30,0:30:70.72:0,71,1345	0/0:22,0:22:42.09:0,42,487	0/1:26,0:26:89.41:175,0,89	0/0:33,0:32:57.09:0,57,606	1/1:4,0:4:2.68:58,3,0
chr10	78506876	.	CTG	C	324.61	PASS	AB=0.947;AC=7;AF=0.125;AN=56;BaseQRankSum=3.106;DP=742;FS=1.447;HRun=0;HaplotypeScore=125.5573;InbreedingCoeff=0.1724;MQ=62.34;MQ0=18;MQRankSum=-2.041;QD=2.73;ReadPosRankSum=1.167;VQSLOD=2.3736;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:18.03:0,18,1225	0/0:13,0:13:20.39:0,20,313	0/0:53,0:15:23.68:0,24,278	0/0:39,0:20:34.47:0,34,387	0/0:25,0:24:45.07:0,45,711	0/1:21,1:22:25.25:25,0,590	0/0:28,0:28:59.98:0,60,909	0/0:31,0:31:48.46:0,48,690	0/0:17,0:17:26.46:0,26,217	0/0:21,0:21:45.14:0,45,682	0/0:18,0:18:33.61:0,34,525	0/0:25,1:26:23.09:0,23,846	0/1:26,1:27:17.15:17,0,708	0/0:24,1:25:23.36:0,23,383	0/0:35,1:36:23.49:0,23,447	0/0:30,0:30:32.44:0,32,1003	0/0:27,1:28:26.30:0,26,459	1/1:25,0:25:44.13:311,44,0	0/1:18,0:18:11.49:11,0,371	0/0:18,0:18:39.13:0,39,622	0/0:58,0:58:69.01:0,69,1542	0/1:14,0:14:9.16:9,0,332	0/1:10,3:13:83.68:84,0,261	0/0:31,0:31:80.61:0,81,1245	0/0:23,0:23:45.15:0,45,721	0/0:26,0:26:48.66:0,49,481	0/0:33,0:32:60.20:0,60,950	0/0:4,0:4:3:0,3,26
chr10	78507854	.	G	GGT	1506.95	PASS	AB=0.833;AC=28;AF=0.519;AN=54;BaseQRankSum=0.334;DP=726;FS=3.775;HRun=0;HaplotypeScore=113.2490;InbreedingCoeff=0.1603;MQ=57.45;MQ0=21;MQRankSum=-1.970;QD=3.24;ReadPosRankSum=-2.493;VQSLOD=2.0991;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,1:32:21.82:22,0,299	0/1:14,0:14:49.88:118,0,50	0/1:45,0:24:0:1,0,0	./.	0/1:21,9:29:88.23:142,0,88	0/0:25,0:27:26.21:0,26,282	0/0:23,0:30:35.23:0,35,304	1/1:26,0:25:6.45:65,6,0	0/0:18,0:21:26.54:0,27,220	0/1:22,7:30:37.74:250,0,38	1/1:14,4:18:11.89:166,12,0	1/1:12,0:22:1.82:5,2,0	1/1:13,0:21:2.86:19,3,0	0/0:29,0:30:29.88:0,30,306	0/0:25,1:32:3.24:0,3,397	0/0:27,0:29:41.61:0,42,400	0/0:25,0:25:34.64:0,35,379	1/1:17,0:16:18.67:122,19,0	0/0:23,0:20:11.50:0,11,118	0/1:23,2:25:29.50:30,0,111	0/1:21,7:33:21.79:145,0,22	1/1:15,0:17:2.74:12,3,0	1/1:13,0:14:2.60:10,3,0	0/1:16,0:29:0:0,0,0	0/1:13,5:21:90.34:136,0,90	1/1:24,0:25:1.08:118,1,0	0/1:18,6:28:46.12:265,0,46	1/1:12,0:11:5.97:45,6,0
chr10	78507884	.	T	TGTG	540.84	PASS	AB=0.633;AC=3;AF=0.054;AN=56;BaseQRankSum=6.573;DP=676;FS=1.913;HRun=0;HaplotypeScore=123.4886;InbreedingCoeff=0.0859;MQ=52.45;MQ0=27;MQRankSum=2.014;QD=10.20;ReadPosRankSum=6.097;VQSLOD=2.8414;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:78.06:0,78,1120	0/0:16,0:15:13.42:0,13,312	0/0:29,0:11:24.92:0,25,288	0/0:28,0:6:18.06:0,18,224	0/0:37,0:36:57.58:0,58,840	0/0:31,0:31:72.21:0,72,979	0/0:30,0:30:74.42:0,74,965	0/0:23,0:22:54.45:0,54,655	0/0:25,0:23:57.11:0,57,767	0/0:23,0:23:34.32:0,34,574	0/0:13,0:12:9.49:0,9,218	0/0:23,0:23:13.59:0,14,187	0/0:14,0:14:3.46:0,3,150	0/0:29,0:29:61.82:0,62,895	0/0:30,0:30:65.66:0,66,991	0/0:26,0:26:69.21:0,69,981	0/0:28,0:27:72.23:0,72,1027	0/1:9,11:22:85.95:328,0,86	0/0:19,0:18:42.10:0,42,541	0/0:25,0:25:50.61:0,51,697	0/0:35,0:34:39.66:0,40,571	0/0:15,0:15:5.72:0,6,249	0/0:15,0:14:27.05:0,27,314	0/0:27,0:27:17.56:0,18,213	0/0:20,0:20:2.76:0,3,389	0/1:8,0:20:99:272,0,187	0/0:22,0:22:20.87:0,21,451	0/1:4,0:6:2.63:40,0,3
chr10	78508057	.	AC	A	961.01	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.981;DP=604;FS=0.000;HRun=6;HaplotypeScore=66.8374;InbreedingCoeff=0.9600;MQ=84.72;MQ0=0;MQRankSum=-1.197;QD=22.35;ReadPosRankSum=0.858;VQSLOD=2.7407;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,120,1539	0/0:8,0:8:21.07:0,21,276	0/0:27,0:27:60.18:0,60,758	0/0:26,0:26:64.09:0,64,767	0/0:17,0:17:51.16:0,51,666	0/0:19,0:19:54.15:0,54,682	0/0:24,0:24:69.22:0,69,908	0/0:33,0:33:81.24:0,81,1028	0/0:15,0:15:42.12:0,42,537	0/0:16,0:16:48.16:0,48,628	0/0:22,0:21:60.16:0,60,769	0/0:18,0:18:51.16:0,51,666	0/0:18,0:18:54.17:0,54,703	0/0:17,0:17:48.13:0,48,600	0/0:39,0:39:99:0,108,1394	0/0:21,0:21:57.19:0,57,750	0/0:21,0:20:54.17:0,54,706	1/1:1,17:18:42.10:451,42,0	0/0:19,0:19:48.15:0,48,617	0/0:23,0:23:60.18:0,60,775	0/0:36,0:36:93.30:0,93,1223	0/0:17,0:17:48.14:0,48,615	0/0:16,0:16:45.15:0,45,592	0/0:19,0:19:48.16:0,48,631	0/0:21,0:21:63.20:0,63,827	1/1:4,19:23:54.10:580,54,0	0/0:21,0:21:60.20:0,60,788	1/1:0,2:2:6.02:64,6,0
chr10	78508354	.	GC	G	5911.76	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=2.265;DP=575;FS=9.441;HRun=8;HaplotypeScore=74.2538;InbreedingCoeff=0.9561;MQ=76.87;MQ0=0;MQRankSum=-0.990;QD=24.03;ReadPosRankSum=0.809;VQSLOD=5.3042;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:96.27:0,96,1136	1/1:0,8:8:24.04:231,24,0	0/0:28,0:26:0.38:0,0,471	0/0:20,0:18:41.18:0,41,467	1/1:3,20:23:53.91:488,54,0	0/0:21,0:21:54.14:0,54,628	0/0:30,0:30:75.23:0,75,906	1/1:4,21:25:63.02:586,63,0	0/0:15,0:15:42.11:0,42,483	1/1:1,15:16:42.06:401,42,0	1/1:1,21:22:60.09:577,60,0	0/0:5,0:27:54.75:0,55,289	0/0:3,0:21:48.88:0,49,248	0/0:26,0:26:75.20:0,75,882	0/0:19,0:19:51.14:0,51,603	1/1:2,14:16:42.07:405,42,0	0/0:21,0:21:57.04:0,57,648	1/1:0,6:6:18.03:174,18,0	1/1:2,18:20:54.06:513,54,0	1/1:4,19:23:62.98:586,63,0	1/1:2,22:24:54.09:521,54,0	0/0:2,0:13:23.04:0,23,137	0/0:4,0:23:42.96:0,43,217	0/0:4,0:21:43.02:0,43,219	1/1:3,16:19:45.07:435,45,0	1/1:1,15:16:42.01:387,42,0	1/1:3,19:22:54.08:521,54,0	1/1:0,6:6:9.01:87,9,0
chr10	78508720	.	A	AT	2591.28	PASS	AB=0.533;AC=5;AF=0.089;AN=56;BaseQRankSum=-6.102;DP=745;FS=7.125;HRun=1;HaplotypeScore=95.2339;InbreedingCoeff=0.7496;MQ=61.52;MQ0=1;MQRankSum=2.056;QD=35.99;ReadPosRankSum=0.425;VQSLOD=3.3097;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:67,0:67:99:0,193,2459	0/0:12,0:12:33.11:0,33,429	0/0:17,0:14:39.11:0,39,481	0/0:19,0:15:18.58:0,19,351	0/0:25,0:25:75.24:0,75,972	0/0:28,0:28:78.24:0,78,999	0/0:29,0:29:84.26:0,84,1076	0/0:30,0:30:84.27:0,84,1091	0/0:19,0:19:54.16:0,54,686	0/0:30,0:30:84.27:0,84,1091	0/0:23,0:23:69.22:0,69,896	0/0:32,0:32:96.30:0,96,1232	0/0:23,0:23:69.21:0,69,882	0/0:26,0:26:75.24:0,75,974	0/0:33,0:33:99:0,99,1285	0/0:32,0:32:93.30:0,93,1207	0/0:37,0:37:99:0,111,1395	1/1:1,35:37:96.33:1439,96,0	0/0:21,0:20:54.15:0,54,673	0/0:24,0:24:66.21:0,66,857	0/0:39,0:39:99:0,117,1519	0/0:24,0:24:69.21:0,69,882	0/0:21,0:21:60.18:0,60,765	0/0:20,0:20:60.20:0,60,779	0/0:18,0:18:54.15:0,54,684	0/1:4,28:32:23.60:1141,0,24	0/0:23,0:22:69.22:0,69,895	1/1:0,3:3:9.03:135,9,0
chr10	78509084	.	G	GAC	1981.01	PASS	AB=0.556;AC=5;AF=0.089;AN=56;BaseQRankSum=5.521;DP=561;FS=7.004;HRun=0;HaplotypeScore=82.2514;InbreedingCoeff=0.8227;MQ=94.05;MQ0=0;MQRankSum=-3.625;QD=47.17;ReadPosRankSum=2.454;VQSLOD=5.0475;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:31.95:0,32,916	0/0:15,0:15:45.15:0,45,689	0/0:35,0:34:87.54:0,88,1439	0/0:33,0:33:81.19:0,81,1197	0/0:13,0:13:39.13:0,39,597	0/0:20,0:20:60.20:0,60,915	0/0:26,0:26:72.23:0,72,1069	0/0:18,0:18:42.13:0,42,624	0/0:19,0:19:57.19:0,57,872	0/0:22,0:22:63.21:0,63,954	0/0:18,0:18:48.16:0,48,732	0/0:26,0:26:75.25:0,75,1148	0/0:20,0:20:60.20:0,60,918	0/0:20,0:20:57.19:0,57,872	0/0:21,0:21:63.20:0,63,942	0/0:25,0:25:75.22:0,75,1103	0/0:21,0:21:54.07:0,54,774	1/1:1,17:18:51.17:984,51,0	0/0:14,0:14:33.11:0,33,503	0/0:14,0:14:39.13:0,39,596	0/0:18,0:18:51.17:0,51,781	0/0:16,0:16:45.15:0,45,688	0/0:18,0:18:48.16:0,48,735	0/0:21,0:21:63.21:0,63,951	0/0:20,0:20:57.16:0,57,830	0/1:3,11:15:6.84:623,0,7	0/0:22,0:22:63.19:0,63,928	1/1:0,9:9:27.09:504,27,0
chr10	78511681	.	TAGTC	T	12753.60	PASS	AB=0.529;AC=21;AF=0.375;AN=56;BaseQRankSum=17.359;DP=676;FS=0.000;HRun=0;HaplotypeScore=116.3194;InbreedingCoeff=0.9249;MQ=80.10;MQ0=2;MQRankSum=-10.851;QD=47.24;ReadPosRankSum=-0.487;VQSLOD=5.1046;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,3136	1/1:0,15:15:45.15:849,45,0	0/0:23,0:24:68.24:0,68,1583	0/0:15,0:15:36.10:0,36,812	1/1:4,17:20:51.17:961,51,0	0/0:23,0:23:69.22:0,69,1805	0/0:18,0:18:51.16:0,51,1317	1/1:5,23:28:69.22:1277,69,0	0/0:23,0:23:66.23:0,66,1760	1/1:2,24:25:69.21:1275,69,0	1/1:1,14:15:39.13:740,39,0	0/0:26,0:26:72.25:0,72,1911	0/0:27,0:27:81.26:0,81,2103	0/0:32,0:32:96.33:0,96,2586	0/0:30,0:30:90.31:0,90,2411	0/1:3,24:26:17.79:1068,0,18	0/0:29,0:29:87.28:0,87,2217	0/0:22,0:22:57.20:0,57,1516	1/1:6,29:35:84.25:1527,84,0	1/1:3,28:30:81.28:1531,81,0	1/1:1,25:26:69.24:1310,69,0	0/0:29,0:29:81.28:0,81,2165	0/0:18,0:18:54.19:0,54,1400	0/0:16,0:16:48.16:0,48,1254	1/1:2,13:15:36.12:683,36,0	0/0:25,0:25:75.26:0,75,1996	1/1:4,27:31:81.28:1532,81,0	0/0:9,0:9:27.09:0,27,729
chr10	78513931	.	TAC	T	4044.05	PASS	AB=0.878;AC=26;AF=0.464;AN=56;BaseQRankSum=2.358;DP=569;FS=4.840;HRun=0;HaplotypeScore=146.5712;InbreedingCoeff=0.5922;MQ=63.36;MQ0=9;MQRankSum=-1.747;QD=13.30;ReadPosRankSum=0.049;VQSLOD=3.3963;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:24.53:0,25,496	1/1:4,4:9:20.90:232,21,0	0/0:39,0:23:27.55:0,28,406	0/0:63,0:31:28.34:0,28,356	1/1:1,12:14:3.29:134,3,0	0/1:15,1:16:3.24:3,0,427	0/0:17,0:17:33.11:0,33,528	1/1:15,26:40:81.24:973,81,0	0/1:20,3:23:33.86:34,0,484	1/1:8,5:13:27.08:319,27,0	0/1:3,15:20:9.41:206,0,9	0/0:8,0:8:21.07:0,21,339	0/0:21,1:22:5.72:0,6,542	0/0:13,0:13:18.06:0,18,281	0/0:21,0:21:32.93:0,33,500	1/1:5,20:24:42.29:607,42,0	0/1:16,1:17:6.19:6,0,401	0/1:14,0:14:9.20:9,0,310	1/1:5,3:8:14.83:158,15,0	1/1:6,13:19:30.09:364,30,0	1/1:5,17:22:19.27:252,19,0	0/1:21,1:22:3.23:3,0,444	0/0:16,0:15:18.06:0,18,285	0/0:18,0:18:29.97:0,30,479	1/1:10,9:19:24.06:281,24,0	0/0:11,0:11:30.10:0,30,459	1/1:9,13:22:39.11:462,39,0	0/0:8,0:8:12.04:0,12,187
chr10	78513963	.	C	CTT	687.36	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=1.521;DP=602;FS=3.921;HRun=0;HaplotypeScore=197.8243;InbreedingCoeff=0.8397;MQ=40.06;MQ0=23;MQRankSum=-3.045;QD=9.29;ReadPosRankSum=-1.230;VQSLOD=2.9002;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:32.72:0,33,635	0/0:9,0:9:3.45:0,3,152	0/0:44,0:10:5.72:0,6,274	0/0:67,0:11:33.10:0,33,489	0/0:19,0:19:6.48:0,6,64	0/0:19,0:19:39.13:0,39,608	0/0:18,0:18:48.13:0,48,700	0/0:31,0:28:27.59:0,28,618	1/1:19,1:20:17.88:185,18,0	0/0:15,0:15:35.93:0,36,350	0/0:27,0:26:14.83:0,15,166	0/0:13,0:13:30.10:0,30,438	0/0:19,0:19:39.12:0,39,550	1/1:14,1:15:20.81:205,21,0	1/1:25,0:25:11.31:215,11,0	0/0:26,0:26:44.43:0,44,567	1/1:12,2:14:20.58:235,21,0	0/0:13,0:13:29.68:0,30,378	0/0:19,0:16:45.21:0,45,390	0/0:22,0:21:21.13:0,21,274	0/0:20,0:19:9.74:0,10,156	0/0:19,0:19:16.28:0,16,425	0/0:9,0:8:9:0,9,142	0/0:22,0:21:33.10:0,33,488	0/0:22,0:22:11.66:0,12,122	0/0:20,0:20:45.10:0,45,566	0/0:20,0:20:23.66:0,24,382	0/0:9,0:8:12.04:0,12,167
chr10	78513967	.	C	CTT	2553.09	PASS	AB=0.957;AC=21;AF=0.375;AN=56;BaseQRankSum=3.563;DP=605;FS=2.906;HRun=0;HaplotypeScore=192.7744;InbreedingCoeff=0.5071;MQ=39.99;MQ0=24;MQRankSum=-2.316;QD=9.56;ReadPosRankSum=-1.165;VQSLOD=2.9387;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:50.20:0,50,712	1/1:8,0:8:4.66:104,5,0	0/0:48,0:12:29.77:0,30,391	0/0:67,0:14:36.12:0,36,544	1/1:18,0:19:9.04:148,9,0	0/0:21,0:21:39.12:0,39,590	0/0:19,0:19:45.13:0,45,671	0/1:25,2:24:99:410,0,124	0/0:22,0:22:10.57:0,11,47	0/1:15,1:16:63.98:280,0,64	1/1:26,1:26:10.90:152,11,0	0/0:13,0:13:21.85:0,22,234	0/0:19,0:19:12.36:0,12,141	0/0:16,0:16:6.87:0,7,25	0/0:24,0:24:2.86:0,3,10	1/1:24,1:25:20.72:347,21,0	0/0:14,0:14:13.04:0,13,89	0/0:13,0:13:24.91:0,25,172	0/1:19,2:17:99:330,0,126	1/1:19,2:20:19.51:191,20,0	1/1:18,4:21:21.90:276,22,0	0/1:20,0:20:16.95:17,0,62	0/0:8,0:7:5.69:0,6,35	0/1:21,0:20:28.19:28,0,129	1/1:19,2:21:9.02:116,9,0	0/0:19,0:19:42.07:0,42,532	1/1:19,0:19:18.81:349,19,0	0/0:9,0:8:12.04:0,12,167
chr10	78513971	.	CACACACACACTT	C	5798.95	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=5.397;DP=610;FS=1.705;HRun=0;HaplotypeScore=239.2645;InbreedingCoeff=0.5259;MQ=40.62;MQ0=22;MQRankSum=-6.994;QD=13.00;ReadPosRankSum=-2.869;VQSLOD=3.5336;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:52.16:0,52,1486	1/1:9,0:9:14.74:137,15,0	0/0:47,0:12:18.68:0,19,291	0/1:62,0:14:1.11:1,0,353	1/1:19,0:19:10.46:257,10,0	0/0:18,0:18:18.06:0,18,587	0/0:19,0:19:29.62:0,30,663	1/1:32,0:30:14.17:543,14,0	1/1:4,19:23:31.87:579,32,0	0/1:18,0:18:1.73:292,0,2	1/1:29,0:28:30.05:325,30,0	0/0:14,0:14:1.58:0,2,314	0/1:21,0:21:66.49:66,0,267	1/1:2,13:15:20.56:535,21,0	1/1:4,21:25:27.05:472,27,0	1/1:26,0:26:35.13:414,35,0	1/1:12,2:14:27.09:546,27,0	0/1:5,0:14:44.77:45,0,653	1/1:22,0:18:3.10:403,3,0	1/1:22,0:21:19:227,19,0	0/1:20,0:19:1.42:57,0,1	0/0:19,0:19:9.44:0,9,210	0/1:8,0:7:24.13:24,0,103	0/0:19,0:18:14.78:0,15,315	1/1:22,0:22:31.86:359,32,0	1/1:17,0:17:26.92:135,27,0	1/1:19,0:19:32.72:368,33,0	1/1:9,0:8:4.50:14,4,0
chr10	78513973	.	CACACACACTT	C	7062.92	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=5.419;DP=606;FS=0.509;HRun=0;HaplotypeScore=222.0897;InbreedingCoeff=0.5125;MQ=41.30;MQ0=21;MQRankSum=-6.414;QD=15.22;ReadPosRankSum=-2.924;VQSLOD=3.5397;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:53.24:0,53,1336	1/1:9,0:9:15.05:212,15,0	0/0:45,0:13:21.61:0,22,287	0/1:59,0:15:42.56:43,0,303	1/1:18,2:20:9.58:256,10,0	0/0:17,0:17:18.06:0,18,484	0/0:18,0:18:29.60:0,30,551	1/1:32,0:30:16.48:664,16,0	1/1:23,0:23:31.45:478,31,0	1/1:18,0:18:5.62:506,6,0	1/1:32,0:31:29.58:366,30,0	0/0:15,0:15:13.14:0,13,220	0/1:21,0:21:83.58:84,0,167	1/1:15,0:15:20.84:402,21,0	1/1:25,0:25:26.92:413,27,0	1/1:26,0:26:38.27:625,38,0	1/1:13,0:13:27.09:414,27,0	0/1:15,0:15:88.31:88,0,473	1/1:18,1:16:6.51:556,7,0	1/1:22,1:22:19:290,19,0	1/1:19,0:18:3.67:83,4,0	0/1:19,0:19:9.87:10,0,108	0/1:8,0:7:23.98:24,0,53	0/0:20,0:19:14.64:0,15,190	1/1:21,1:22:31.03:379,31,0	1/1:18,0:18:47.92:471,48,0	1/1:19,0:19:42:590,42,0	1/1:9,0:8:12:109,12,0
chr10	78513975	.	CACACACTT	C	8339.60	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=4.629;DP=597;FS=1.089;HRun=0;HaplotypeScore=200.8953;InbreedingCoeff=0.5027;MQ=41.98;MQ0=21;MQRankSum=-5.785;QD=18.13;ReadPosRankSum=-2.525;VQSLOD=4.0553;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:50.84:0,51,1191	1/1:2,6:8:15.05:309,15,0	0/0:45,0:14:18.30:0,18,316	0/1:59,0:16:49.81:50,0,280	1/1:8,11:19:9.03:254,9,0	0/0:15,0:15:18.06:0,18,428	0/0:18,0:18:27.55:0,28,476	1/1:12,18:28:5.51:749,6,0	1/1:23,0:23:31.45:436,31,0	1/1:4,15:19:6.16:662,6,0	1/1:11,21:31:28.91:410,29,0	0/0:14,0:14:12.84:0,13,100	0/1:21,0:21:67.07:85,0,67	1/1:15,0:15:20.61:347,21,0	1/1:23,0:24:27:387,27,0	1/1:5,21:26:38.92:861,39,0	1/1:13,0:13:30.08:404,30,0	0/1:16,0:16:99:129,0,283	1/1:8,9:15:5.78:673,6,0	1/1:9,14:22:19:354,19,0	1/1:15,1:17:5.23:114,5,0	0/1:19,0:19:16.32:37,0,16	0/1:8,0:7:5.95:26,0,6	0/0:20,0:19:10.42:0,10,67	1/1:4,18:22:30.56:400,31,0	1/1:18,0:18:48.05:653,48,0	1/1:5,14:19:42.09:806,42,0	1/1:11,0:10:12.04:193,12,0
chr10	78513977	.	CACACTT	C	7465.86	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=7.410;DP=595;FS=5.248;HRun=0;HaplotypeScore=192.1752;InbreedingCoeff=0.4023;MQ=42.76;MQ0=19;MQRankSum=-4.890;QD=15.27;ReadPosRankSum=0.181;VQSLOD=3.7185;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:57.19:0,57,1151	1/1:8,0:8:15.03:191,15,0	0/0:45,0:15:0.99:0,1,271	0/1:57,0:18:68.77:69,0,235	1/1:19,0:19:8.66:254,9,0	0/0:17,0:17:18.95:0,19,379	0/0:18,0:18:27.51:0,28,432	0/1:30,0:28:2.03:714,0,2	1/1:23,0:23:29.97:391,30,0	1/1:19,0:19:5.65:517,6,0	1/1:32,0:31:28.23:343,28,0	0/1:14,0:14:5.01:35,0,5	0/1:20,0:20:1.02:130,0,1	1/1:14,0:14:20.88:291,21,0	1/1:24,0:24:26.62:359,27,0	1/1:26,0:26:39.10:575,39,0	1/1:13,0:13:30.09:386,30,0	0/1:16,0:16:98.17:131,0,98	1/1:17,0:15:5.71:454,6,0	1/1:22,0:21:18.53:255,19,0	1/1:19,0:18:11.99:135,12,0	1/1:20,0:20:16.32:128,16,0	1/1:8,0:7:8.87:68,9,0	0/1:19,0:18:4.52:58,0,5	1/1:22,0:22:30.09:367,30,0	1/1:1,17:18:48.10:802,48,0	1/1:18,0:18:42.55:535,43,0	1/1:1,10:10:12.04:279,12,0
chr10	78513981	.	CTT	C	6913.15	PASS	AB=0.983;AC=46;AF=0.821;AN=56;BaseQRankSum=8.490;DP=560;FS=6.780;HRun=2;HaplotypeScore=157.6436;InbreedingCoeff=0.5078;MQ=46.36;MQ0=18;MQRankSum=-2.874;QD=13.85;ReadPosRankSum=3.074;VQSLOD=2.1375;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,2:26:49.70:0,50,887	1/1:7,1:8:15:148,15,0	0/1:44,0:16:6.69:7,0,267	0/1:52,4:19:65.76:66,0,272	1/1:14,3:17:17.26:272,17,0	0/0:18,0:18:18.52:0,19,219	0/0:17,0:17:26.66:0,27,230	0/1:24,0:22:8.91:671,0,9	1/1:19,2:21:29.94:307,30,0	1/1:17,1:18:2.52:415,3,0	1/1:24,5:28:28.70:296,29,0	1/1:0,13:13:21.07:327,21,0	1/1:1,17:18:11.90:292,12,0	1/1:13,0:13:20.90:194,21,0	1/1:22,2:24:26.98:292,27,0	1/1:21,4:25:41.69:346,42,0	1/1:5,7:12:29.99:331,30,0	1/1:12,3:15:36.02:396,36,0	0/1:14,0:12:1.86:316,0,2	1/1:17,3:19:17.44:170,17,0	1/1:10,5:14:7.53:99,8,0	1/1:0,18:18:17.74:267,18,0	1/1:0,8:7:9.03:131,9,0	1/1:2,18:19:15.05:245,15,0	1/1:20,1:21:29.77:338,30,0	1/1:17,0:17:47.95:485,48,0	1/1:15,3:18:42.83:403,43,0	1/1:11,0:10:11.97:99,12,0
chr10	78513983	.	T	TAC	985.68	PASS	AB=0.977;AC=23;AF=0.411;AN=56;BaseQRankSum=1.094;DP=571;FS=10.573;HRun=0;HaplotypeScore=182.3387;InbreedingCoeff=0.3160;MQ=46.41;MQ0=17;MQRankSum=-1.251;QD=3.43;ReadPosRankSum=-5.073;VQSLOD=0.3649;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:47.13:0,47,527	0/1:7,0:8:9.31:14,0,9	0/0:45,0:18:21.59:0,22,306	0/0:56,0:19:29.20:0,29,237	1/1:16,0:17:10.75:41,11,0	1/1:2,17:18:15.05:242,15,0	1/1:5,12:17:16.30:245,16,0	1/1:23,0:22:26.61:138,27,0	0/1:21,0:21:0.55:1,0,25	0/0:19,0:19:1.26:0,1,26	0/1:29,0:28:2.24:2,0,16	0/0:13,0:13:8.30:0,8,42	0/0:19,0:19:9.61:0,10,36	0/1:13,0:13:13.10:13,0,27	0/1:23,0:24:10.45:10,0,13	0/0:25,0:25:18.78:0,19,104	0/1:12,0:12:12.30:13,0,12	1/1:15,0:15:21.85:127,22,0	1/1:14,0:13:17.85:127,18,0	0/0:21,0:20:5.05:0,5,33	1/1:17,0:16:0.63:9,1,0	0/0:18,0:18:9.29:0,9,36	0/0:8,0:7:4.96:0,5,18	0/0:20,0:19:12.48:0,12,46	0/1:21,0:21:4.89:5,0,5	0/1:18,0:18:11.82:149,0,12	0/1:17,0:18:26.72:27,0,30	0/0:11,0:11:10.73:0,11,46
chr10	78516604	.	C	CACACG	1178.13	PASS	AB=0.952;AC=9;AF=0.167;AN=54;BaseQRankSum=3.381;DP=140;FS=16.782;HRun=0;HaplotypeScore=43.4961;InbreedingCoeff=0.4926;MQ=101.90;MQ0=0;MQRankSum=-3.212;QD=29.45;ReadPosRankSum=0.511;VQSLOD=1.6518;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:12.04:0,12,229	./.	0/0:12,0:8:10.95:0,11,199	0/1:19,0:15:18.30:18,0,166	0/0:3,0:3:9.03:0,9,156	0/0:6,0:6:18.06:0,18,344	0/0:6,0:6:18.06:0,18,344	0/0:12,0:12:24.08:0,24,409	1/1:0,5:5:15.05:434,15,0	0/0:3,0:3:9.03:0,9,172	0/0:3,0:3:9.03:0,9,172	0/0:4,0:4:8.86:0,9,171	0/0:4,0:4:12.04:0,12,212	1/1:0,3:3:5.62:172,6,0	1/1:2,8:10:21.07:608,21,0	0/0:3,0:3:9.03:0,9,172	1/1:1,1:2:3.01:87,3,0	0/0:2,0:2:3.01:0,3,41	0/0:6,0:6:12.04:0,12,229	0/0:3,0:3:3.01:0,3,57	0/0:7,0:7:9.01:0,9,139	0/0:1,0:1:3.01:0,3,57	0/0:2,0:2:3.01:0,3,57	0/0:4,0:4:3.01:0,3,57	0/0:5,0:5:15.05:0,15,270	0/0:3,0:3:9.03:0,9,156	0/0:3,0:3:9.03:0,9,156	0/0:3,0:3:9.03:0,9,172
chr10	78516716	.	C	CT	265.60	PASS	AB=0.845;AC=8;AF=0.143;AN=56;BaseQRankSum=0.013;DP=360;FS=6.691;HRun=12;HaplotypeScore=40.8507;InbreedingCoeff=0.4806;MQ=79.97;MQ0=2;MQRankSum=-0.434;QD=6.64;ReadPosRankSum=0.295;VQSLOD=1.0496;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:47.60:0,48,345	0/0:4,0:4:11.93:0,12,88	0/0:17,1:14:4.86:0,5,40	0/0:15,0:9:7.79:0,8,41	0/0:13,0:13:28.83:0,29,201	0/0:16,0:17:34.78:0,35,246	0/0:13,0:13:3.76:0,4,188	0/0:19,0:22:36.77:0,37,252	0/0:10,0:11:28.88:0,29,203	0/0:15,0:15:23.76:0,24,175	0/0:8,0:9:25.86:0,26,177	0/0:9,0:9:11.90:0,12,88	0/0:10,0:10:20.84:0,21,153	0/0:11,0:11:17.87:0,18,131	0/0:13,0:13:29.79:0,30,217	0/1:4,1:5:17.24:17,0,54	0/0:19,0:19:41.67:0,42,303	1/1:1,0:14:28.69:160,29,0	0/0:17,1:18:21.50:0,22,318	0/0:18,0:18:47.72:0,48,350	0/0:11,0:10:23.86:0,24,175	0/0:9,0:9:23.86:0,24,175	0/0:16,0:16:35.66:0,36,255	0/0:23,0:23:62.52:0,63,451	0/1:4,1:6:15.21:15,0,58	1/1:5,7:12:2.12:177,2,0	0/0:4,0:3:8.94:0,9,66	1/1:2,1:3:3:29,3,0
chr10	78516844	.	CA	C	5091.49	PASS	AB=0.778;AC=33;AF=0.589;AN=56;BaseQRankSum=2.608;DP=419;FS=20.154;HRun=11;HaplotypeScore=49.3001;InbreedingCoeff=0.7705;MQ=72.50;MQ0=1;MQRankSum=-0.824;QD=18.72;ReadPosRankSum=0.021;VQSLOD=3.8116;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:30.06:0,30,313	1/1:0,4:4:11.99:99,12,0	0/1:14,0:13:6.48:6,0,115	0/0:5,0:5:6.02:0,6,64	1/1:2,13:15:35.95:296,36,0	0/0:16,1:17:23.48:0,23,455	0/0:14,0:14:36.07:0,36,369	1/1:4,22:26:68.71:555,69,0	0/0:6,0:19:25.68:0,26,133	1/1:2,11:13:32.96:271,33,0	1/1:1,9:10:26.96:222,27,0	1/1:3,15:18:38.95:320,39,0	1/1:0,18:18:50.90:418,51,0	0/0:3,0:15:11.58:0,12,67	0/0:0,0:17:34.16:0,34,171	1/1:2,14:16:38.45:319,38,0	0/0:5,0:20:38.62:0,39,190	0/0:14,0:14:39.10:0,39,416	1/1:4,13:18:40.99:326,41,0	1/1:1,16:17:44.92:369,45,0	1/1:2,12:14:35.96:296,36,0	1/1:1,9:10:26.97:222,27,0	1/1:2,16:19:52.94:419,53,0	0/1:2,14:16:15.57:297,0,16	1/1:1,8:9:23.96:197,24,0	0/0:15,0:16:38.93:0,39,398	1/1:4,18:22:53.93:443,54,0	0/1:9,3:12:16.20:16,0,255
chr10	78517279	.	TA	T	2831.05	PASS	AB=0.878;AC=25;AF=0.446;AN=56;BaseQRankSum=1.142;DP=483;FS=2.923;HRun=12;HaplotypeScore=69.5187;InbreedingCoeff=0.6000;MQ=73.67;MQ0=3;MQRankSum=1.394;QD=9.76;ReadPosRankSum=1.629;VQSLOD=3.1125;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:17:9.62:0,10,243	1/1:1,4:5:8.92:70,9,0	0/1:23,2:16:11.59:12,0,69	0/1:15,0:10:14.15:14,0,67	1/1:6,13:19:38.81:302,39,0	0/0:18,1:19:33.82:0,34,500	0/0:12,0:12:33.03:0,33,319	1/1:11,21:33:28.32:391,28,0	0/1:12,1:13:5.19:5,0,134	1/1:1,0:19:35.88:104,36,0	1/1:7,0:20:25.13:77,25,0	0/0:8,0:12:22.95:0,23,121	0/0:3,0:16:34.24:0,34,181	0/0:16,0:16:27.05:0,27,274	0/0:13,1:14:3.82:0,4,220	1/1:1,20:22:52.83:401,53,0	0/0:16,1:18:21.69:0,22,387	0/0:10,1:12:3.66:0,4,204	0/1:7,16:23:34.60:310,0,35	1/1:3,22:26:55.69:417,56,0	1/1:2,13:15:35.81:274,36,0	0/0:3,0:10:23.08:0,23,129	0/0:5,0:8:23.32:0,23,159	0/0:5,0:24:45.77:0,46,255	1/1:1,14:15:41.84:325,42,0	0/1:17,0:18:12.64:13,0,292	1/1:5,16:21:41.81:325,42,0	0/0:13,1:15:9.64:0,10,251
chr10	78517337	.	AAC	A	3233.06	PASS	AB=0.744;AC=25;AF=0.463;AN=54;BaseQRankSum=-0.484;DP=512;FS=6.313;HRun=0;HaplotypeScore=95.8541;InbreedingCoeff=0.5586;MQ=57.75;MQ0=9;MQRankSum=4.711;QD=11.76;ReadPosRankSum=1.979;VQSLOD=2.9514;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:18.67:0,19,382	1/1:4,2:7:11.86:114,12,0	0/0:33,0:17:3.01:0,3,32	0/0:30,0:18:3.01:0,3,42	0/1:15,5:20:21.58:179,0,22	0/0:19,0:21:35.12:0,35,449	0/0:21,0:21:27.09:0,27,404	0/1:22,5:27:9.17:86,0,9	0/0:7,0:13:5.55:0,6,50	1/1:13,5:19:23.88:232,24,0	1/1:11,5:16:15.04:166,15,0	0/1:5,9:13:13.26:208,0,13	1/1:7,10:18:38.91:402,39,0	0/0:10,0:20:17.43:0,17,117	0/0:9,0:19:29.49:0,29,237	1/1:8,4:15:26.57:241,27,0	0/0:17,0:19:12:0,12,104	0/0:6,0:13:10.84:0,11,87	./.	0/1:18,6:24:21.22:205,0,21	1/1:21,8:29:29.91:313,30,0	1/1:4,4:8:12.03:133,12,0	1/1:3,12:15:24.06:266,24,0	1/1:13,9:23:29.91:313,30,0	1/1:13,6:19:24.04:252,24,0	0/0:11,0:14:25.23:0,25,242	0/1:10,9:20:3.67:323,0,4	0/0:7,0:6:5.98:0,6,47
chr10	78517758	.	C	CT	5777.44	PASS	AB=0.781;AC=36;AF=0.643;AN=56;BaseQRankSum=-8.255;DP=437;FS=20.752;HRun=10;HaplotypeScore=57.0322;InbreedingCoeff=0.7066;MQ=62.07;MQ0=0;MQRankSum=4.144;QD=19.19;ReadPosRankSum=1.716;VQSLOD=3.7854;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:24:58.01:0,58,455	1/1:2,1:3:3.01:32,3,0	0/0:9,0:5:5.98:0,6,47	0/0:12,0:9:5.93:0,6,67	1/1:4,15:20:44.98:459,45,0	0/0:17,1:18:15.96:0,16,337	0/0:18,0:18:41.92:0,42,342	1/1:15,18:33:32.60:514,33,0	1/1:1,12:13:33.08:352,33,0	1/1:4,19:23:32.45:538,32,0	1/1:0,15:15:45.11:480,45,0	0/0:17,0:16:1.68:0,2,8	0/0:18,0:16:4.13:0,4,12	1/1:0,8:8:21.05:224,21,0	1/1:5,13:18:39.10:416,39,0	1/1:5,13:18:36.09:384,36,0	1/1:2,14:16:42.11:448,42,0	1/1:1,1:16:19.89:100,20,0	1/1:5,4:14:19.91:201,20,0	1/1:3,10:13:11.44:325,11,0	1/1:4,9:13:24.06:256,24,0	0/1:9,0:9:2.04:18,0,2	0/0:11,0:11:6.05:0,6,16	0/0:8,0:8:2.29:0,2,6	1/1:3,11:14:5.44:263,5,0	1/1:3,1:22:42.54:241,43,0	0/1:4,14:18:4.17:371,0,4	1/1:0,0:14:31.32:157,31,0
chr10	78517768	.	TC	T	2101.29	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=2.845;DP=416;FS=5.514;HRun=1;HaplotypeScore=66.5019;InbreedingCoeff=0.9007;MQ=60.50;MQ0=11;MQRankSum=-1.872;QD=32.83;ReadPosRankSum=-0.864;VQSLOD=2.8369;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:53:0,53,750	0/0:1,0:1:2.99:0,3,23	0/0:15,0:4:8.94:0,9,70	0/0:17,0:7:1.81:0,2,106	0/0:19,0:19:50.80:0,51,400	0/0:17,0:17:51.13:0,51,675	0/0:16,0:16:48.02:0,48,605	0/0:27,0:26:77.67:0,78,644	0/0:14,0:14:38.85:0,39,299	0/0:21,0:21:45.64:0,46,470	0/0:17,0:17:50.78:0,51,386	1/1:2,14:15:45.14:597,45,0	1/1:0,17:15:45.15:612,45,0	0/0:9,0:9:23.83:0,24,183	0/0:18,0:18:53.82:0,54,419	0/0:14,0:14:38.86:0,39,298	0/0:17,0:17:50.83:0,51,394	0/0:13,0:13:20.91:0,21,160	0/0:12,0:11:30.33:0,30,231	0/0:14,0:14:41.82:0,42,337	0/0:10,0:10:26.88:0,27,202	1/1:4,8:12:33.07:398,33,0	1/1:2,10:12:35.98:444,36,0	1/1:2,5:7:20.96:224,21,0	0/0:11,0:11:29.91:0,30,247	0/0:20,0:20:56.24:0,56,450	0/0:16,0:16:47.86:0,48,404	0/0:12,0:12:32.87:0,33,252
chr10	78517805	.	CG	C	1205.99	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=8.133;DP=336;FS=4.914;HRun=1;HaplotypeScore=48.5417;InbreedingCoeff=0.9495;MQ=50.84;MQ0=28;MQRankSum=-3.563;QD=28.71;ReadPosRankSum=1.697;VQSLOD=3.3495;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.20:0,60,958	0/0:1,0:1:3.01:0,3,48	./.	./.	0/0:16,0:16:42.13:0,42,646	0/0:8,0:8:24.07:0,24,359	0/0:8,0:8:24.08:0,24,381	0/0:24,0:20:57.18:0,57,886	0/0:12,0:12:30.10:0,30,473	0/0:13,0:12:36.11:0,36,533	0/0:12,0:12:36.12:0,36,569	1/1:1,8:8:21.95:270,22,0	1/1:1,8:7:18.06:230,18,0	0/0:8,0:8:24.08:0,24,369	0/0:18,0:17:51.17:0,51,815	0/0:11,0:11:30.09:0,30,457	0/0:14,0:14:42.14:0,42,659	0/0:15,0:15:30.10:0,30,479	0/0:7,0:5:15.05:0,15,228	0/0:16,0:16:48.16:0,48,752	0/0:10,0:10:27.09:0,27,393	1/1:2,7:9:27:312,27,0	1/1:0,8:8:24.08:308,24,0	1/1:0,7:7:21.06:255,21,0	0/0:9,0:9:27.08:0,27,409	0/0:14,0:14:39.12:0,39,596	0/0:13,0:12:36.12:0,36,575	0/0:14,0:13:36.12:0,36,576
chr10	78517948	.	C	CA	39.98	PASS	AB=0.867;AC=3;AF=0.079;AN=38;BaseQRankSum=1.431;DP=227;FS=6.274;HRun=0;HaplotypeScore=13.1869;InbreedingCoeff=0.0171;MQ=21.73;MQ0=76;MQRankSum=-0.515;QD=1.60;ReadPosRankSum=2.518;VQSLOD=0.1140;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,1:5:3.01:45,3,0	./.	0/0:5,0:2:6.02:0,6,81	./.	./.	0/0:5,1:3:3.01:0,3,42	0/1:11,2:5:32.58:80,0,33	./.	0/0:3,0:1:3.01:0,3,42	0/0:6,0:1:3.01:0,3,42	0/0:5,0:2:3.01:0,3,42	./.	0/0:8,0:5:8.94:0,9,82	0/0:4,0:2:6.02:0,6,83	0/0:12,0:9:17.75:0,18,116	0/0:11,0:5:5.98:0,6,62	./.	0/0:15,0:2:3.01:0,3,42	0/0:4,0:1:3.01:0,3,42	./.	./.	0/0:6,0:4:3.01:0,3,42	0/0:8,0:2:3.01:0,3,42	0/0:6,0:2:5.98:0,6,61	0/0:8,0:3:6.02:0,6,83	0/0:6,0:1:3.01:0,3,42	0/0:9,0:4:11.87:0,12,115	./.
chr10	78519277	.	G	GT	1932.96	PASS	AB=0.951;AC=32;AF=0.571;AN=56;BaseQRankSum=5.639;DP=710;FS=2.997;HRun=13;HaplotypeScore=123.1893;InbreedingCoeff=0.2939;MQ=56.01;MQ0=27;MQRankSum=-5.745;QD=3.48;ReadPosRankSum=-3.337;VQSLOD=0.6137;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,1:29:48.19:0,48,460	0/0:9,0:9:17.75:0,18,119	0/1:71,2:25:3.25:3,0,76	0/1:72,0:19:8.51:9,0,51	0/1:32,0:30:10.60:11,0,218	0/0:23,0:25:6.24:0,6,239	0/0:13,3:17:5.92:0,6,166	0/1:28,1:29:14.12:14,0,126	1/1:8,16:24:23.95:211,24,0	0/0:28,0:28:16.92:0,17,293	0/1:18,1:20:19.61:20,0,150	1/1:16,0:20:37.49:173,37,0	1/1:14,0:16:17.13:91,17,0	1/1:16,3:19:25.95:203,26,0	0/1:22,7:28:23.06:233,0,23	0/0:20,0:20:22.99:0,23,150	1/1:8,6:14:20.95:177,21,0	1/1:8,0:12:28.05:148,28,0	0/1:24,2:25:13.26:13,0,186	0/0:25,0:25:24.28:0,24,282	0/1:14,0:13:14.49:14,0,19	1/1:6,0:12:19.89:94,20,0	1/1:11,0:17:20.12:97,20,0	1/1:9,0:10:8.46:42,8,0	0/1:31,2:32:25.57:26,0,126	1/1:22,2:34:66.85:428,67,0	0/1:26,1:29:5.38:5,0,186	1/1:2,1:11:17.37:113,17,0
chr10	78519292	.	G	GTT	5292.03	PASS	AB=0.759;AC=41;AF=0.732;AN=56;BaseQRankSum=-0.009;DP=724;FS=0.000;HRun=13;HaplotypeScore=104.3765;InbreedingCoeff=0.6528;MQ=54.21;MQ0=27;MQRankSum=-1.360;QD=10.46;ReadPosRankSum=0.912;VQSLOD=3.6731;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:59.10:0,59,496	0/1:2,2:10:5.89:168,0,6	0/1:87,0:23:13.50:13,0,72	0/0:83,0:21:18.32:0,18,132	1/1:16,9:25:26.49:559,26,0	0/0:22,0:23:35.12:0,35,300	0/0:19,0:19:29.66:0,30,245	1/1:15,6:24:30.54:364,31,0	1/1:14,3:19:21.43:230,21,0	0/1:14,1:22:1.30:197,0,1	1/1:7,14:25:34.98:470,35,0	1/1:12,1:18:34.07:267,34,0	1/1:14,0:16:19.60:144,20,0	1/1:9,6:16:11.83:131,12,0	1/1:12,9:26:30.95:357,31,0	1/1:8,10:18:0.58:147,1,0	1/1:5,6:13:12.04:162,12,0	1/1:8,6:15:15.15:150,15,0	1/1:10,12:23:40.25:374,40,0	1/1:9,19:31:53.47:587,53,0	1/1:9,1:15:1.43:45,1,0	1/1:9,0:11:13.97:109,14,0	1/1:11,0:15:12.49:114,12,0	1/1:4,0:7:12.29:91,12,0	1/1:10,18:32:34.49:383,34,0	0/0:38,0:35:3.64:0,4,310	1/1:13,3:28:20.55:230,21,0	0/0:18,0:17:26.50:0,26,219
chr10	78519976	.	TTG	T	347.75	PASS	AB=0.903;AC=12;AF=0.261;AN=46;BaseQRankSum=0.427;DP=479;FS=2.025;HRun=0;HaplotypeScore=67.4829;InbreedingCoeff=0.2338;MQ=64.43;MQ0=10;MQRankSum=0.635;QD=2.20;ReadPosRankSum=2.661;VQSLOD=1.4957;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:23.97:0,24,274	./.	./.	./.	0/1:11,0:13:8.54:9,0,17	0/0:18,0:19:11.99:0,12,139	0/1:19,5:24:11.60:12,0,214	./.	1/1:8,5:12:9.02:97,9,0	0/0:11,0:14:6:0,6,53	0/1:4,0:4:9.25:9,0,15	0/0:19,0:18:16.80:0,17,167	0/0:15,0:14:21.77:0,22,203	1/1:7,6:13:18.05:194,18,0	0/1:26,2:28:32.03:32,0,294	0/0:18,0:26:26.87:0,27,267	1/1:11,3:17:11.69:93,12,0	0/0:16,0:15:18.04:0,18,232	0/1:11,2:13:16.51:32,0,17	0/0:9,0:13:6:0,6,52	0/0:22,0:23:12.29:0,12,94	0/0:13,0:14:5.12:0,5,90	0/0:5,0:9:8.99:0,9,76	0/1:19,1:32:17.40:17,0,90	0/0:7,0:7:5.97:0,6,47	0/0:25,0:25:9.99:0,10,124	0/0:19,0:20:11.17:0,11,192	./.
chr10	78519991	.	T	TGA	560.16	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=0.741;DP=503;FS=7.815;HRun=0;HaplotypeScore=66.5546;InbreedingCoeff=0.3292;MQ=52.01;MQ0=23;MQRankSum=0.729;QD=6.37;ReadPosRankSum=4.444;VQSLOD=1.5775;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:43.51:0,44,519	0/0:5,0:5:11.91:0,12,88	0/0:30,0:5:2.99:0,3,24	0/0:33,0:14:34.35:0,34,337	0/0:14,0:13:32.82:0,33,252	0/0:17,0:17:38.93:0,39,360	0/0:23,0:23:50.70:0,51,510	0/0:18,0:18:44.96:0,45,392	0/0:16,0:15:23.96:0,24,197	0/0:17,0:17:24.06:0,24,309	0/0:2,0:2:4.81:0,5,29	0/0:19,0:18:43.62:0,44,318	0/0:15,0:14:28.68:0,29,239	0/0:9,0:9:26.88:0,27,209	0/0:30,0:30:62.45:0,62,735	0/1:24,0:23:85.49:85,0,256	0/0:20,0:20:50.82:0,51,401	0/0:21,0:20:56.80:0,57,538	0/0:15,0:15:24.15:0,24,226	0/1:14,0:13:8.67:9,0,169	0/0:24,0:24:30.54:0,31,351	0/1:15,0:15:18.95:19,0,129	0/0:9,0:9:7.61:0,8,66	0/0:29,0:29:32.09:0,32,287	0/1:7,0:6:7:7,0,61	1/1:3,21:25:15.92:532,16,0	0/0:19,0:19:30.18:0,30,402	1/1:3,0:3:5.95:42,6,0
chr10	78523840	.	TG	T	2158.96	PASS	AB=0.784;AC=23;AF=0.426;AN=54;BaseQRankSum=1.380;DP=443;FS=5.527;HRun=10;HaplotypeScore=56.6421;InbreedingCoeff=0.6603;MQ=73.59;MQ0=0;MQRankSum=-0.874;QD=11.48;ReadPosRankSum=2.142;VQSLOD=2.8580;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:51.10:0,51,535	1/1:4,5:9:14.99:130,15,0	0/0:16,0:16:17.10:0,17,202	0/0:11,0:10:9.82:0,10,118	1/1:8,8:16:26.95:229,27,0	0/0:19,1:20:19.08:0,19,422	0/0:28,2:30:20:0,20,621	1/1:9,7:16:20.74:163,21,0	0/0:10,0:15:5.86:0,6,39	1/1:3,11:14:29.97:260,30,0	1/1:4,6:10:14.98:130,15,0	0/0:8,0:19:14.11:0,14,90	0/0:9,0:18:20.04:0,20,112	0/0:6,0:11:2.87:0,3,15	0/0:10,0:17:8.67:0,9,53	0/1:2,10:12:3.19:204,0,3	0/0:13,0:34:20.24:0,20,111	0/1:14,2:16:7:7,0,370	1/1:5,11:16:35.94:305,36,0	1/1:4,6:10:17.98:156,18,0	1/1:6,16:22:44.98:387,45,0	0/1:5,0:8:0.01:0,0,0	0/0:5,0:11:11.35:0,11,57	0/0:10,0:23:17.34:0,17,110	0/1:4,9:13:2.94:158,0,3	0/1:14,2:17:20.95:42,0,21	1/1:0,9:9:21:182,21,0	./.
chr10	78525020	.	G	GCAAAACAAAA	10376.32	PASS	AB=0.824;AC=14;AF=0.250;AN=56;BaseQRankSum=-4.985;DP=687;FS=4.863;HRun=0;HaplotypeScore=180.8190;InbreedingCoeff=0.8075;MQ=71.32;MQ0=5;MQRankSum=-12.315;QD=51.88;ReadPosRankSum=-1.648;VQSLOD=4.2976;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:90.31:0,90,2699	0/0:12,0:12:33.09:0,33,876	0/0:31,0:27:22.05:0,22,566	0/1:26,0:18:14.16:14,0,497	0/0:22,0:22:60.17:0,60,1529	0/0:16,0:16:42.14:0,42,1218	0/0:28,0:28:69.24:0,69,2054	0/0:31,0:31:48.13:0,48,1075	1/1:5,11:18:24.08:1165,24,0	0/0:36,0:36:78.27:0,78,2266	0/0:19,0:19:51.17:0,51,1464	0/0:22,0:22:36.11:0,36,877	0/0:25,0:25:60.19:0,60,1624	1/1:5,22:27:53.89:2651,54,0	1/1:13,19:33:30.10:1402,30,0	0/0:20,0:20:48.16:0,48,1464	1/1:12,21:33:30.10:1495,30,0	1/1:9,8:18:15.05:552,15,0	0/0:20,0:20:33.09:0,33,784	0/0:27,0:27:78.25:0,78,2265	0/0:22,0:22:57.16:0,57,1515	0/0:23,0:23:48.16:0,48,1336	0/0:19,0:19:39.13:0,39,1144	0/0:21,0:21:45.15:0,45,1374	0/0:19,0:20:47.18:0,47,1247	0/1:15,17:33:34.49:2165,0,34	0/0:27,0:27:60.18:0,60,1630	1/1:5,5:10:21.07:933,21,0
chr10	78525453	.	GAA	G	3933.50	PASS	AB=0.558;AC=15;AF=0.268;AN=56;BaseQRankSum=4.835;DP=651;FS=5.171;HRun=11;HaplotypeScore=90.1830;InbreedingCoeff=0.8845;MQ=71.71;MQ0=6;MQRankSum=1.216;QD=23.84;ReadPosRankSum=5.524;VQSLOD=3.4780;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:31:81.26:0,81,1212	0/0:9,0:10:30.10:0,30,444	0/0:39,0:24:37.36:0,37,414	0/0:24,0:11:8.49:0,8,93	0/0:31,0:31:53.26:0,53,975	0/0:23,0:23:54.17:0,54,791	0/0:16,0:17:47.42:0,47,643	0/0:36,0:37:99:0,99,1451	0/0:14,0:14:41.80:0,42,591	0/0:24,0:26:62.16:0,62,867	0/0:26,0:26:63.21:0,63,965	1/1:1,17:18:42.10:447,42,0	1/1:3,27:31:65.81:682,66,0	0/0:16,0:19:44.63:0,45,614	0/0:27,0:27:59.87:0,60,886	0/0:23,0:23:56.66:0,57,799	0/0:24,0:25:62.62:0,63,878	1/1:0,15:14:39.10:415,39,0	0/0:18,0:22:55.88:0,56,712	0/0:29,0:29:78.24:0,78,1155	0/0:7,0:7:14.54:0,15,193	1/1:1,21:21:51.09:543,51,0	1/1:0,36:36:76.57:827,77,0	1/1:1,14:15:39.10:415,39,0	0/0:22,0:26:62.69:0,63,892	0/1:5,18:24:81.48:508,0,81	0/0:28,0:28:69.22:0,69,1013	1/1:0,4:4:9.02:96,9,0
chr10	78525906	.	G	GTGT	4901.42	PASS	AB=0.996;AC=18;AF=0.321;AN=56;BaseQRankSum=-1.096;DP=835;FS=20.490;HRun=0;HaplotypeScore=169.8750;InbreedingCoeff=0.1972;MQ=69.04;MQ0=3;MQRankSum=3.722;QD=11.98;ReadPosRankSum=0.577;VQSLOD=2.9847;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:96.25:0,96,1269	0/1:16,0:16:10.23:10,0,181	0/0:31,0:25:33.08:0,33,428	0/0:47,0:35:51.06:0,51,652	0/1:32,0:32:51.26:51,0,190	0/0:27,0:27:69.19:0,69,924	0/0:34,0:34:72.14:0,72,896	0/1:35,0:35:99:126,0,108	1/1:4,14:18:30.10:602,30,0	0/1:36,0:36:77.84:78,0,176	0/1:18,0:18:22.32:22,0,164	0/0:26,0:26:54.16:0,54,730	0/0:36,0:36:90.24:0,90,1222	1/1:8,18:27:51.13:972,51,0	1/1:20,23:43:99:1831,102,0	0/1:25,1:26:21.38:21,0,233	1/1:11,23:37:48.16:963,48,0	0/0:22,0:22:43.70:0,44,353	0/1:32,0:32:99:100,0,140	0/0:34,0:34:23.18:0,23,358	0/1:31,0:31:47.73:48,0,152	0/0:39,0:38:96.27:0,96,1289	0/0:22,0:22:51.13:0,51,663	0/0:29,0:29:66.12:0,66,876	0/1:27,0:27:2.61:3,0,247	0/1:31,0:31:75:75,0,254	0/0:26,0:26:54.50:0,55,410	0/0:14,0:14:6.81:0,7,193
chr10	78525933	.	TTGTTGTTGC	T	8095.32	PASS	AB=0.591;AC=21;AF=0.375;AN=56;BaseQRankSum=10.251;DP=805;FS=10.266;HRun=0;HaplotypeScore=256.7576;InbreedingCoeff=0.9074;MQ=57.74;MQ0=7;MQRankSum=-5.833;QD=28.91;ReadPosRankSum=0.099;VQSLOD=3.0567;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:99:0,99,3997	1/1:6,13:19:18.45:429,18,0	0/0:32,0:25:49.05:0,49,1621	0/0:39,0:25:41.41:0,41,1130	1/1:12,13:25:29.65:654,30,0	0/0:29,0:29:51.17:0,51,1987	0/0:29,0:29:69.22:0,69,2858	1/1:24,0:24:24.08:469,24,0	0/0:23,0:23:54.19:0,54,1693	1/1:11,22:33:63.06:1158,63,0	1/1:9,13:21:32.90:538,33,0	0/0:28,0:28:69.22:0,69,2858	0/0:35,0:35:75.26:0,75,3150	0/0:32,0:32:75.26:0,75,2878	0/0:38,0:38:93.32:0,93,3487	0/1:8,18:26:99:771,0,105	0/0:37,0:36:78.20:0,78,2781	0/0:27,0:27:60.17:0,60,2095	1/1:9,15:22:45.09:935,45,0	1/1:17,17:33:42.04:946,42,0	1/1:15,10:25:6.33:180,6,0	0/0:39,0:38:72.22:0,72,2597	0/0:19,0:19:34.36:0,34,1379	0/0:35,0:35:93.32:0,93,3956	1/1:9,11:20:30.10:855,30,0	0/0:31,0:31:60.21:0,60,2141	1/1:9,19:28:45.03:1160,45,0	0/0:10,0:10:30.10:0,30,1030
chr10	78525942	.	C	CTGT	2518.57	PASS	AB=0.981;AC=18;AF=0.321;AN=56;BaseQRankSum=4.055;DP=759;FS=5.680;HRun=0;HaplotypeScore=178.1705;InbreedingCoeff=0.7616;MQ=64.48;MQ0=6;MQRankSum=2.872;QD=11.34;ReadPosRankSum=-5.706;VQSLOD=1.4087;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:99:0,106,1566	1/1:17,0:17:4.55:54,5,0	0/0:33,0:28:75:0,75,1053	0/0:41,0:28:51.61:0,52,601	1/1:19,0:19:9.73:193,10,0	0/0:27,0:27:60.16:0,60,856	0/0:27,0:27:72.24:0,72,1108	1/1:9,18:28:57.15:855,57,0	0/0:25,0:25:66.18:0,66,917	1/1:26,0:26:37.79:533,38,0	1/1:19,0:18:12.18:237,12,0	0/0:29,0:29:81.23:0,81,1181	0/0:33,0:33:87.23:0,87,1288	0/0:35,0:35:84.23:0,84,1127	0/0:40,0:40:99:0,102,1348	0/1:23,0:23:27.20:27,0,53	0/0:44,0:43:93.44:0,93,1240	0/0:23,0:23:53.60:0,54,808	1/1:21,0:18:16.18:378,16,0	1/1:23,0:22:7.29:251,7,0	1/1:19,1:20:8.23:102,8,0	0/0:35,0:35:87.26:0,87,1283	0/0:17,0:17:39.13:0,39,591	0/0:34,0:34:99:0,99,1482	0/0:14,0:14:6.84:0,7,24	0/0:28,0:28:66.22:0,66,1017	0/1:25,1:26:15.33:85,0,15	0/0:10,0:10:30.03:0,30,374
chr10	78527818	.	C	CA	6027.30	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-14.864;DP=678;FS=2.016;HRun=1;HaplotypeScore=58.8914;InbreedingCoeff=0.9967;MQ=83.68;MQ0=0;MQRankSum=-7.296;QD=41.00;ReadPosRankSum=2.898;VQSLOD=5.4683;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.16:0,51,658	0/0:10,0:10:30.10:0,30,390	0/0:26,0:26:75.22:0,75,948	0/0:23,0:23:63.16:0,63,785	0/0:24,0:24:72.23:0,72,935	0/0:32,0:32:87.28:0,87,1130	0/0:19,0:19:57.19:0,57,740	0/0:32,0:32:90.29:0,90,1157	1/1:1,21:22:54.18:809,54,0	0/0:33,0:33:90.28:0,90,1154	0/0:18,0:18:51.17:0,51,661	0/0:21,0:21:63.18:0,63,790	0/0:25,0:25:72.21:0,72,918	1/1:0,22:22:57.19:854,57,0	1/1:1,29:30:87.29:1304,87,0	0/0:16,0:16:48.14:0,48,609	1/1:1,26:27:72.24:1079,72,0	1/1:1,19:20:60.20:899,60,0	0/0:29,0:29:84.27:0,84,1091	0/0:37,0:37:99:0,111,1427	0/0:16,0:16:45.15:0,45,583	0/0:24,0:24:72.23:0,72,934	0/0:30,0:30:84.27:0,84,1090	0/0:28,0:28:84.26:0,84,1075	0/0:20,0:20:60.19:0,60,777	1/1:2,19:21:24.24:856,24,0	0/0:50,0:50:99:0,141,1828	1/1:0,5:5:15.05:225,15,0
chr10	78528483	.	A	AG	3230.05	PASS	AB=0.862;AC=24;AF=0.429;AN=56;BaseQRankSum=4.648;DP=598;FS=30.367;HRun=0;HaplotypeScore=102.4867;InbreedingCoeff=0.1439;MQ=73.64;MQ0=8;MQRankSum=0.260;QD=8.52;ReadPosRankSum=9.057;VQSLOD=1.4059;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:59.64:0,60,440	0/1:18,0:20:99:103,0,126	0/0:48,0:21:33.52:0,34,296	0/0:39,0:19:47.39:0,47,340	0/1:21,0:21:1.38:248,0,1	0/0:24,0:24:61.91:0,62,509	0/0:22,0:22:61.75:0,62,454	0/1:23,0:23:26.39:299,0,26	1/1:18,0:18:43.55:266,44,0	0/1:14,12:27:99:173,0,104	0/1:6,14:21:43.95:106,0,44	0/0:16,0:16:33:0,33,287	0/0:15,0:15:23.96:0,24,201	1/1:13,0:13:23.19:136,23,0	1/1:25,0:25:55.36:323,55,0	0/1:8,0:8:12.52:104,0,13	1/1:14,0:14:25.52:170,26,0	0/1:9,0:9:20.97:60,0,21	0/1:19,2:20:73.92:175,0,74	0/1:34,0:34:59.19:336,0,59	0/1:8,13:23:43.79:44,0,55	0/0:7,0:7:6.47:0,6,55	0/0:17,0:17:32.67:0,33,239	0/0:6,0:6:12.39:0,12,95	0/1:26,0:26:91.72:155,0,92	1/1:34,0:34:86.85:590,87,0	0/1:16,15:33:17.20:17,0,171	1/1:9,0:9:11.67:117,12,0
chr10	78529983	.	GC	G	11488.66	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=10.544;DP=577;FS=4.883;HRun=8;HaplotypeScore=85.2515;InbreedingCoeff=0.9923;MQ=86.50;MQ0=0;MQRankSum=-5.007;QD=25.31;ReadPosRankSum=3.028;VQSLOD=5.5903;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,114,1376	1/1:0,4:4:12.02:116,12,0	0/0:25,0:25:66.15:0,66,743	0/0:14,0:14:25.32:0,25,287	1/1:0,15:15:45.07:435,45,0	0/0:23,0:23:66.19:0,66,786	0/0:19,0:19:48.11:0,48,567	1/1:4,15:19:45.05:427,45,0	1/1:3,24:27:72.11:695,72,0	1/1:2,25:27:72.11:695,72,0	1/1:2,16:18:48.07:463,48,0	1/1:1,23:24:63.10:608,63,0	1/1:2,23:25:69.10:666,69,0	1/1:4,23:27:66.10:637,66,0	1/1:2,18:20:54.08:518,54,0	1/1:3,12:15:36.05:348,36,0	1/1:1,25:26:63.10:609,63,0	1/1:3,12:15:33.05:319,33,0	1/1:2,15:17:45.07:435,45,0	1/1:0,20:20:48.07:464,48,0	1/1:1,15:16:42.07:406,42,0	1/1:1,18:19:54.09:522,54,0	1/1:1,22:23:63.10:608,63,0	1/1:1,13:14:33.05:319,33,0	1/1:0,13:13:36.06:348,36,0	1/1:3,22:25:66.10:637,66,0	1/1:2,28:30:84.13:811,84,0	1/1:0,15:15:41.33:404,41,0
chr10	78532215	.	AAGAT	A	2030.58	PASS	AB=1.000;AC=17;AF=0.327;AN=52;BaseQRankSum=4.859;DP=547;FS=0.000;HRun=0;HaplotypeScore=97.9534;InbreedingCoeff=0.7806;MQ=65.72;MQ0=4;MQRankSum=0.155;QD=11.54;ReadPosRankSum=0.737;VQSLOD=2.8317;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:23:18.06:0,18,314	0/0:7,0:7:6.02:0,6,120	./.	./.	0/0:13,0:28:12.96:0,13,552	1/1:14,9:23:27.09:412,27,0	1/1:9,1:10:3.01:46,3,0	0/0:31,0:30:0:0,0,0	1/1:4,0:16:18.02:167,18,0	1/1:10,10:20:30.09:437,30,0	0/0:19,0:19:36.12:0,36,795	0/0:23,0:23:33.11:0,33,711	0/0:18,0:18:33.11:0,33,722	1/1:14,10:24:24.08:366,24,0	1/1:8,0:14:9.01:84,9,0	0/0:9,0:14:3.01:0,3,52	1/1:14,18:32:26.68:412,27,0	0/0:11,0:24:15.05:0,15,262	1/1:10,6:16:18.06:273,18,0	0/0:22,0:22:36.11:0,36,773	0/0:17,0:17:18.06:0,18,353	0/1:21,0:21:21.09:21,0,425	0/0:12,0:12:21.06:0,21,423	0/0:16,0:16:18.01:0,18,376	0/0:19,0:19:21.07:0,21,461	0/0:17,0:17:27.09:0,27,610	0/0:33,0:32:42.14:0,42,937	0/0:13,0:13:9.03:0,9,209
chr10	78532602	.	AAGAT	A	5153.46	PASS	AC=40;AF=0.800;AN=50;BaseQRankSum=3.155;DP=623;FS=0.715;HRun=0;HaplotypeScore=130.3597;InbreedingCoeff=0.7668;MQ=70.88;MQ0=6;MQRankSum=-4.171;QD=11.28;ReadPosRankSum=2.904;VQSLOD=4.2879;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:43:32.14:0,32,520	0/0:7,0:13:30.10:0,30,491	./.	0/0:16,0:14:0:0,0,0	1/1:20,15:35:30.10:452,30,0	0/0:21,0:21:27.09:0,27,597	0/0:13,0:13:2.99:0,3,24	./.	1/1:15,0:23:12.01:112,12,0	1/1:14,0:26:21.80:220,22,0	1/1:14,14:28:39.09:562,39,0	1/1:12,0:18:15.02:140,15,0	1/1:17,0:27:15.02:140,15,0	1/1:10,0:20:24.02:220,24,0	1/1:20,0:26:12.01:111,12,0	1/1:12,17:29:45.15:666,45,0	1/1:14,8:21:21.07:316,21,0	1/1:8,0:10:3:28,3,0	1/1:18,5:24:18.04:233,18,0	1/1:10,17:27:36.12:542,36,0	./.	1/1:3,0:7:6.01:56,6,0	1/1:17,0:28:23.98:209,24,0	1/1:18,0:24:5.90:56,6,0	1/1:9,10:18:21.07:316,21,0	1/1:11,0:26:36.35:359,36,0	1/1:18,9:27:24.08:361,24,0	1/1:6,0:8:6.01:56,6,0
chr10	78532831	.	TACACAC	T	5746.65	PASS	AB=0.588;AC=21;AF=0.375;AN=56;BaseQRankSum=-0.463;DP=926;FS=2.430;HRun=0;HaplotypeScore=237.4324;InbreedingCoeff=0.9133;MQ=54.69;MQ0=24;MQRankSum=-6.896;QD=20.09;ReadPosRankSum=1.196;VQSLOD=4.4364;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:71,0:71:99:0,162,4782	1/1:4,9:13:6.02:128,6,0	0/0:52,0:19:11.99:0,12,228	0/0:72,0:34:35.94:0,36,738	1/1:4,12:16:6.35:129,6,0	0/0:22,0:21:54.17:0,54,1644	0/0:30,0:31:54.15:0,54,1504	1/1:17,29:47:90.13:1430,90,0	0/0:13,0:31:55.05:0,55,1374	1/1:5,19:25:60.16:1072,60,0	1/1:1,18:20:15.05:319,15,0	0/0:4,0:31:24.93:0,25,447	0/0:15,0:37:39.91:0,40,591	0/0:11,0:30:66.11:0,66,1590	0/0:16,0:43:71.89:0,72,1759	1/1:3,26:29:29.89:631,30,0	0/0:16,0:47:56.59:0,57,1779	0/0:11,0:26:48.13:0,48,1096	1/1:4,11:15:22.69:292,23,0	1/1:3,27:31:29.88:586,30,0	0/1:12,28:40:0.03:0,0,0	0/0:5,0:21:15.33:0,15,197	0/0:2,0:21:9.63:0,10,127	0/0:15,0:43:6.95:0,7,57	1/1:3,23:26:18.05:383,18,0	0/0:9,0:40:99:0,102,2227	1/1:4,19:24:43.04:775,43,0	0/0:6,0:14:36.07:0,36,804
chr10	78534686	.	C	CA	7397.30	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-15.150;DP=733;FS=6.381;HRun=6;HaplotypeScore=66.3567;InbreedingCoeff=0.9985;MQ=87.70;MQ0=0;MQRankSum=-1.639;QD=32.73;ReadPosRankSum=3.091;VQSLOD=5.0444;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,38:41:99:1396,111,0	0/0:6,0:6:18.04:0,18,184	0/0:25,1:26:66.04:0,66,629	0/0:26,0:26:40.26:0,40,406	0/0:31,0:31:84.17:0,84,850	1/1:0,25:25:63.20:793,63,0	1/1:3,25:28:66.21:830,66,0	0/0:38,0:38:96.21:0,96,979	0/0:29,0:29:81.18:0,81,826	0/0:25,0:25:66.15:0,66,673	0/0:19,0:19:57.13:0,57,582	1/1:3,21:24:63.20:793,63,0	1/1:3,24:27:72.23:906,72,0	0/0:33,0:33:90.20:0,90,918	0/0:46,0:46:99:0,129,1315	0/0:27,0:27:78.13:0,78,780	0/0:32,0:32:87.16:0,87,878	0/0:27,0:27:75.14:0,75,756	0/0:16,0:16:42.09:0,42,428	0/0:17,0:17:48.10:0,48,483	0/0:28,0:28:81.18:0,81,826	1/1:0,15:15:45.14:566,45,0	1/1:1,21:22:63.20:793,63,0	1/1:4,40:44:99:1321,105,0	0/0:17,0:17:51.11:0,51,520	0/0:32,1:33:55.46:0,55,874	0/0:22,0:22:60.14:0,60,612	0/0:9,0:9:27.06:0,27,275
chr10	78534923	.	GCACA	G	980.92	PASS	AB=0.865;AC=28;AF=0.609;AN=46;BaseQRankSum=2.418;DP=574;FS=3.031;HRun=0;HaplotypeScore=106.2482;InbreedingCoeff=0.0525;MQ=59.44;MQ0=29;MQRankSum=-0.851;QD=2.69;ReadPosRankSum=-0.184;VQSLOD=1.8532;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,3:35:8.82:120,9,0	0/1:4,0:4:34.18:40,0,34	./.	./.	1/1:9,1:12:5.39:73,5,0	1/1:23,1:25:14.04:145,14,0	1/1:28,0:28:3.01:56,3,0	0/0:27,0:25:4.21:0,4,23	0/1:20,0:21:22.48:22,0,268	0/1:24,0:24:8.43:8,0,87	0/1:12,1:16:0:0,0,0	1/1:14,0:18:3:28,3,0	1/1:10,0:17:8.66:61,9,0	0/1:16,0:17:0.46:0,0,162	0/1:14,11:25:1.63:169,0,2	0/1:11,4:14:13.23:65,0,13	0/0:29,0:28:23.81:0,24,442	0/0:22,0:31:37.33:0,37,586	./.	0/0:10,0:10:6:0,6,57	0/1:36,1:36:39.49:104,0,39	./.	1/1:6,0:6:2.94:18,3,0	1/1:20,0:19:5.68:41,6,0	./.	0/1:14,0:18:25.55:58,0,26	1/1:12,3:14:6.01:92,6,0	0/1:3,0:4:21.71:22,0,54
chr10	78536771	.	A	ATG	3789.53	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-9.980;DP=551;FS=4.428;HRun=0;HaplotypeScore=63.1163;InbreedingCoeff=0.8439;MQ=65.30;MQ0=6;MQRankSum=0.432;QD=28.71;ReadPosRankSum=4.398;VQSLOD=4.9260;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,23:31:48.16:792,48,0	0/0:7,0:7:15.05:0,15,188	0/0:22,0:11:3.81:0,4,136	0/0:30,0:19:1.96:0,2,252	0/0:21,0:21:60.19:0,60,748	1/1:8,19:27:51.17:808,51,0	1/1:2,6:8:9.03:149,9,0	0/0:37,0:37:87.20:0,87,1032	0/0:10,0:10:27.09:0,27,337	0/0:19,0:19:51.16:0,51,633	0/0:26,0:26:69.16:0,69,809	1/1:2,15:17:42.14:687,42,0	1/1:2,10:12:24.08:396,24,0	0/0:11,0:11:27.06:0,27,312	0/0:18,0:18:48.14:0,48,586	0/0:11,0:11:27.09:0,27,337	0/0:26,0:26:66.18:0,66,808	0/0:32,0:32:72.16:0,72,880	0/0:17,0:17:36.11:0,36,440	0/0:32,0:32:87.28:0,87,1086	0/0:10,0:10:18.04:0,18,211	1/1:0,6:6:15.05:247,15,0	1/1:1,10:11:24.08:396,24,0	1/1:3,9:12:18.06:297,18,0	0/0:25,0:24:63.19:0,63,775	0/0:32,0:32:81.26:0,81,1013	0/0:32,0:32:84.23:0,84,1021	0/1:7,0:7:17.44:17,0,32
chr10	78536896	.	A	ATG	4298.55	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-3.821;DP=483;FS=9.490;HRun=0;HaplotypeScore=88.4790;InbreedingCoeff=0.9779;MQ=64.33;MQ0=0;MQRankSum=-0.015;QD=35.53;ReadPosRankSum=2.377;VQSLOD=7.1616;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,11:18:21.07:349,21,0	0/0:10,0:10:24.06:0,24,290	0/0:14,0:10:11.97:0,12,135	0/0:12,0:6:12.87:0,13,118	0/0:26,0:26:72.20:0,72,880	1/1:7,28:35:41.40:1209,41,0	1/1:0,11:11:27.09:449,27,0	0/0:35,0:35:90.24:0,90,1077	0/0:17,0:17:48.09:0,48,552	0/0:20,0:20:60.19:0,60,757	0/0:18,0:18:48.13:0,48,590	1/1:0,10:10:30.10:498,30,0	1/1:2,14:16:36.12:598,36,0	0/0:8,0:8:21.07:0,21,265	0/0:16,0:16:48.15:0,48,605	0/0:9,0:9:18.06:0,18,227	0/0:17,0:17:39.12:0,39,490	0/0:28,0:28:72.23:0,72,908	0/0:12,0:12:27.09:0,27,341	0/0:25,0:25:69.22:0,69,870	0/0:8,0:8:21.07:0,21,264	1/1:0,7:7:21.07:349,21,0	1/1:2,13:15:36.12:598,36,0	1/1:1,8:9:15.05:249,15,0	0/0:19,0:19:54.15:0,54,655	0/0:27,0:27:63.20:0,63,794	0/0:37,0:37:93.30:0,93,1173	0/0:4,0:4:12.02:0,12,136
chr10	78537543	.	C	CTT	27983.72	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-4.486;DP=629;FS=0.000;HRun=0;HaplotypeScore=72.0655;InbreedingCoeff=0.9907;MQ=77.15;MQ0=1;MQRankSum=-1.371;QD=55.09;ReadPosRankSum=2.882;VQSLOD=5.2422;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:60.21:1219,60,0	1/1:0,10:10:24.08:488,24,0	0/0:12,0:12:33.11:0,33,538	0/0:13,0:13:18.86:0,19,314	1/1:0,33:33:93.32:1867,93,0	1/1:0,19:19:57.20:1159,57,0	1/1:0,19:22:48.16:976,48,0	1/1:1,28:30:90.29:1761,90,0	0/0:25,0:25:75.23:0,75,1197	1/1:0,32:31:96.33:1928,96,0	1/1:2,31:33:93.28:1848,93,0	1/1:0,25:25:66.23:1341,66,0	1/1:0,27:27:81.28:1646,81,0	0/0:23,1:24:11.27:0,11,1053	1/1:0,25:27:72.25:1441,72,0	1/1:0,11:11:33.11:671,33,0	0/0:21,0:21:60.18:0,60,942	0/0:26,0:26:72.22:0,72,1125	1/1:0,16:17:51.17:965,51,0	1/1:0,32:33:96.29:1867,96,0	1/1:0,14:15:39.13:793,39,0	1/1:0,14:16:39.13:793,39,0	1/1:0,26:26:72.25:1463,72,0	1/1:1,18:20:51.18:1036,51,0	1/1:1,22:23:60.21:1220,60,0	1/1:0,22:23:69.23:1356,69,0	1/1:2,22:25:66.18:1294,66,0	1/1:0,15:19:42.14:853,42,0
chr10	78539655	.	T	TACACAC	4443.60	PASS	AB=0.774;AC=41;AF=0.759;AN=54;BaseQRankSum=4.453;DP=633;FS=0.534;HRun=0;HaplotypeScore=150.5621;InbreedingCoeff=0.5075;MQ=67.26;MQ0=2;MQRankSum=0.604;QD=9.09;ReadPosRankSum=-3.347;VQSLOD=2.4935;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:32:12.51:313,13,0	1/1:3,0:6:9.03:116,9,0	./.	0/0:28,0:23:5.98:0,6,49	1/1:10,0:19:18.06:231,18,0	1/1:13,0:24:6.02:157,6,0	1/1:9,0:19:2.70:78,3,0	1/1:22,0:34:33.07:411,33,0	0/0:19,0:19:39.08:0,39,689	1/1:12,0:26:44.91:520,45,0	1/1:5,0:22:26.34:345,26,0	1/1:10,1:22:6.02:157,6,0	1/1:14,0:21:5.93:156,6,0	0/0:22,0:22:5.76:0,6,650	1/1:11,0:36:36.12:460,36,0	0/0:8,0:25:51.17:0,51,706	0/1:28,0:27:3.38:3,0,1037	0/0:28,0:31:14.38:0,14,931	1/1:11,0:15:12.04:160,12,0	1/1:9,0:17:9.03:115,9,0	0/1:18,0:44:83.36:314,0,83	1/1:19,0:19:6.02:150,6,0	1/1:9,0:17:8.06:162,8,0	1/1:17,0:27:6.01:157,6,0	1/1:2,0:16:11.26:152,11,0	0/1:13,0:23:88.81:171,0,89	1/1:5,0:15:8.26:114,8,0	1/1:0,0:3:0.47:1,0,0
chr10	78541115	.	TTC	T	4872.03	PASS	AB=0.664;AC=8;AF=0.143;AN=56;BaseQRankSum=14.556;DP=734;FS=4.252;HRun=0;HaplotypeScore=110.7222;InbreedingCoeff=-0.1667;MQ=71.40;MQ0=0;MQRankSum=-4.053;QD=18.32;ReadPosRankSum=2.516;VQSLOD=5.1804;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:22,22:44:99:744,0,1012	0/0:12,0:12:36.12:0,36,676	0/0:26,0:25:75:0,75,1202	0/0:25,0:24:44.59:0,45,1021	0/0:34,0:34:99:0,99,1883	0/1:18,20:38:99:778,0,830	0/1:17,14:31:99:381,0,764	0/0:34,0:34:99:0,99,1835	0/0:26,0:26:78.27:0,78,1497	0/0:28,0:28:81.28:0,81,1538	0/0:21,0:21:63.20:0,63,1157	0/1:16,7:23:99:303,0,675	0/1:13,14:27:99:475,0,555	0/0:15,0:15:42.14:0,42,809	0/0:26,0:26:69.24:0,69,1311	0/0:19,0:19:57.20:0,57,1089	0/0:35,0:35:99:0,102,1894	0/0:11,0:11:33.11:0,33,637	0/0:21,0:21:63.21:0,63,1153	0/0:24,0:24:69.24:0,69,1317	0/0:13,0:13:36.12:0,36,686	0/1:11,21:32:99:786,0,289	0/1:17,24:41:99:793,0,618	0/1:13,17:30:99:612,0,373	0/0:27,0:27:81.28:0,81,1545	0/0:35,0:35:99:0,105,1978	0/0:27,0:27:81.28:0,81,1518	0/0:9,0:9:27.09:0,27,521
chr10	78541198	.	TTACA	T	6104.46	PASS	AB=0.900;AC=37;AF=0.712;AN=52;BaseQRankSum=12.128;DP=650;FS=2.883;HRun=0;HaplotypeScore=134.5925;InbreedingCoeff=0.8917;MQ=69.05;MQ0=0;MQRankSum=-0.435;QD=14.30;ReadPosRankSum=-1.077;VQSLOD=4.4823;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,8:26:4.10:346,4,0	1/1:3,6:9:18.06:277,18,0	./.	./.	1/1:21,13:34:39.13:578,39,0	1/1:5,0:12:12.01:112,12,0	1/1:16,0:19:9:80,9,0	1/1:39,0:39:5.98:46,6,0	0/0:23,0:23:39.12:0,39,867	1/1:12,19:31:57.19:870,57,0	1/1:9,10:19:24.08:369,24,0	1/1:12,0:21:27.03:251,27,0	1/1:9,0:16:25.28:238,25,0	0/0:33,0:33:51.18:0,51,1170	1/1:17,20:37:48.13:738,48,0	1/1:6,10:16:27.09:415,27,0	0/0:32,0:31:45.14:0,45,980	0/0:21,0:22:48.16:0,48,1080	1/1:11,5:16:9.03:138,9,0	1/1:16,12:28:33.11:493,33,0	1/1:11,8:19:21.07:323,21,0	1/1:12,0:18:15.01:136,15,0	1/1:11,0:18:20.90:187,21,0	0/1:16,0:18:0:0,0,0	0/0:26,0:26:45.15:0,45,1008	0/0:25,0:25:42.14:0,42,981	1/1:18,13:30:33.11:507,33,0	0/0:10,0:10:18.03:0,18,330
chr10	78541953	.	GA	G	1934.95	PASS	AB=0.563;AC=13;AF=0.241;AN=54;BaseQRankSum=11.079;DP=457;FS=5.916;HRun=9;HaplotypeScore=42.9024;InbreedingCoeff=0.8560;MQ=70.96;MQ0=0;MQRankSum=-0.968;QD=22.24;ReadPosRankSum=2.444;VQSLOD=4.2541;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:33.02:302,33,0	0/0:5,0:5:12.04:0,12,138	0/0:7,0:7:11.58:0,12,99	0/0:5,0:5:12.02:0,12,127	0/0:15,0:17:47.93:0,48,519	1/1:2,22:24:63.03:577,63,0	0/1:2,7:9:10.61:168,0,11	0/0:33,0:34:90.10:0,90,1018	0/0:14,0:14:36.11:0,36,415	0/0:25,0:26:75.03:0,75,833	0/0:31,0:31:81.12:0,81,905	1/1:2,14:16:42.02:384,42,0	1/1:0,19:19:51.03:467,51,0	0/0:15,0:15:39.12:0,39,449	0/0:15,0:15:36.11:0,36,415	0/0:11,0:11:33.10:0,33,381	0/0:17,0:17:48.13:0,48,544	0/0:15,0:15:30.09:0,30,346	0/0:30,0:30:81.24:0,81,935	0/0:27,0:27:66.20:0,66,761	0/0:5,0:5:9.03:0,9,104	./.	1/1:0,6:6:18.01:165,18,0	1/1:0,2:2:6:55,6,0	0/0:25,0:25:72.21:0,72,830	0/0:25,0:25:69.20:0,69,787	0/0:31,0:30:81.24:0,81,933	0/0:15,0:15:39.10:0,39,441
chr10	78543570	.	GA	G	11265.99	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=7.430;DP=727;FS=9.539;HRun=11;HaplotypeScore=77.0046;InbreedingCoeff=0.8893;MQ=72.03;MQ0=0;MQRankSum=-2.131;QD=17.69;ReadPosRankSum=1.634;VQSLOD=5.6086;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,18:25:31.45:396,31,0	1/1:2,16:18:15.96:337,16,0	0/0:13,0:13:20.88:0,21,221	0/1:14,0:14:6.48:6,0,138	1/1:2,23:26:32.96:467,33,0	1/1:7,36:43:92.86:764,93,0	1/1:2,16:18:41.94:345,42,0	1/1:5,24:29:62.90:514,63,0	0/0:23,0:24:56.98:0,57,590	1/1:8,24:32:68.88:565,69,0	1/1:6,24:30:65.56:528,66,0	1/1:5,24:29:65.91:542,66,0	1/1:3,21:24:47.93:394,48,0	0/0:26,1:27:44.52:0,45,673	1/1:4,24:28:62.89:517,63,0	1/1:2,18:20:44.94:369,45,0	0/0:25,1:26:44.51:0,45,671	1/1:2,11:13:29.96:246,30,0	1/1:8,21:29:59.87:488,60,0	1/1:9,27:38:75.87:596,76,0	1/1:3,19:22:47.93:394,48,0	1/1:3,26:30:50.27:527,50,0	1/1:6,20:27:50.42:401,50,0	1/1:5,22:27:55.97:449,56,0	1/1:3,16:19:44.94:369,45,0	1/1:3,26:29:71.88:591,72,0	1/1:2,45:48:99:991,122,0	1/1:0,19:19:56.93:467,57,0
chr10	78544432	.	TAATA	T	1071.19	PASS	AC=14;AF=0.467;AN=30;BaseQRankSum=1.370;DP=212;FS=0.000;HRun=0;HaplotypeScore=33.8658;InbreedingCoeff=0.5965;MQ=53.63;MQ0=8;MQRankSum=0.691;QD=12.60;ReadPosRankSum=0.925;VQSLOD=2.2735;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:2.98:22,3,0	0/0:3,0:6:3.48:0,3,54	./.	./.	0/0:2,0:2:3.01:0,3,68	1/1:3,0:2:3:28,3,0	./.	./.	./.	./.	1/1:3,1:4:3.01:46,3,0	0/0:4,0:4:0.47:0,0,1	./.	./.	0/0:8,0:8:12.04:0,12,226	0/0:3,0:3:9.03:0,9,208	1/1:19,17:36:33.11:501,33,0	1/1:7,8:15:24.07:347,24,0	./.	./.	0/0:3,0:3:6.02:0,6,139	./.	./.	./.	0/0:7,0:8:9.03:0,9,152	1/1:5,3:8:9.01:115,9,0	0/0:5,0:5:3.01:0,3,52	1/1:9,4:13:9.03:137,9,0
chr10	78544694	.	TA	T	1788.48	PASS	AB=0.777;AC=26;AF=0.464;AN=56;BaseQRankSum=2.730;DP=424;FS=33.837;HRun=14;HaplotypeScore=45.9904;InbreedingCoeff=0.5749;MQ=55.24;MQ0=17;MQRankSum=2.163;QD=8.44;ReadPosRankSum=0.591;VQSLOD=0.1549;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,3:39:37.82:0,38,466	1/1:1,1:2:2.94:21,3,0	0/0:13,1:6:5.59:0,6,54	0/1:7,0:3:14.50:14,0,22	1/1:8,11:18:1.79:157,2,0	0/0:12,1:13:6.19:0,6,171	0/1:8,2:10:23.20:23,0,85	1/1:13,21:29:40.55:271,41,0	0/0:16,0:15:29.99:0,30,265	0/1:7,12:18:9.42:202,0,9	1/1:6,7:13:23.70:161,24,0	0/0:9,1:10:3.43:0,3,161	0/0:16,0:15:18.01:0,18,164	0/0:9,0:9:20.86:0,21,182	1/1:5,13:18:35.65:247,36,0	1/1:2,6:8:14.83:103,15,0	0/0:37,1:38:75.17:0,75,682	0/0:13,1:13:9.45:0,9,222	1/1:10,8:16:20.74:144,21,0	1/1:7,11:16:23.72:164,24,0	0/1:5,6:11:10:85,0,10	0/0:4,0:4:9.01:0,9,84	1/1:6,1:7:2.90:20,3,0	0/0:9,0:9:17.86:0,18,154	1/1:5,9:15:28.74:191,29,0	0/0:7,0:11:14.62:0,15,103	1/1:1,9:10:26.78:185,27,0	0/0:9,0:14:15.45:0,15,75
chr10	78546752	.	T	TTC	10089.28	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=0.834;DP=500;FS=1.683;HRun=0;HaplotypeScore=97.7345;InbreedingCoeff=0.8182;MQ=64.76;MQ0=8;MQRankSum=0.051;QD=25.04;ReadPosRankSum=0.999;VQSLOD=5.8625;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:42.08:573,42,0	1/1:7,1:8:18.06:277,18,0	0/1:32,0:20:0.11:0,0,425	0/0:35,0:19:29.41:0,29,318	1/1:19,0:19:36.12:532,36,0	1/1:27,0:27:72.11:1031,72,0	1/1:15,0:12:29.83:364,30,0	1/1:32,0:30:72.20:1035,72,0	0/0:16,0:16:38.88:0,39,419	1/1:19,0:19:50.94:706,51,0	1/1:7,0:7:14.90:170,15,0	1/1:19,0:19:49.35:645,49,0	1/1:15,0:15:8.11:38,8,0	0/0:14,0:14:23.94:0,24,260	1/1:5,3:15:15.05:186,15,0	1/1:12,1:15:33.10:484,33,0	0/0:14,0:13:27.07:0,27,349	0/0:18,0:17:38.38:0,38,399	1/1:17,0:17:41.49:552,41,0	1/1:16,0:16:30.07:381,30,0	1/1:0,11:11:6.02:74,6,0	1/1:16,0:16:39.73:484,40,0	1/1:15,0:15:8.94:99,9,0	1/1:20,0:20:42.11:576,42,0	1/1:15,0:15:30.10:450,30,0	1/1:4,15:19:41.68:528,42,0	0/1:12,0:13:4.75:292,0,5	1/1:15,0:15:39.13:612,39,0
chr10	78546760	.	CTCTT	C	4443.26	PASS	AB=0.990;AC=41;AF=0.732;AN=56;BaseQRankSum=3.605;DP=475;FS=4.987;HRun=0;HaplotypeScore=124.9331;InbreedingCoeff=0.0044;MQ=57.30;MQ0=10;MQRankSum=1.010;QD=10.68;ReadPosRankSum=-1.151;VQSLOD=3.6283;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:23:15.41:192,0,15	1/1:6,0:6:11.20:101,11,0	0/0:29,0:17:15.68:0,16,325	0/0:30,0:14:9.48:0,9,158	1/1:16,0:16:35.31:233,35,0	0/1:27,0:27:99:284,0,191	0/1:16,0:12:12.68:118,0,13	1/1:31,0:28:71.55:532,72,0	0/1:15,1:16:51.30:51,0,213	1/1:18,0:18:35.07:301,35,0	1/1:6,0:6:14.56:89,15,0	0/1:19,0:19:12.94:244,0,13	1/1:3,13:16:8.67:160,9,0	0/1:16,1:17:55.70:56,0,65	1/1:13,0:12:14.57:86,15,0	0/1:13,0:13:6.90:129,0,7	0/1:15,0:14:72.90:108,0,73	0/1:19,0:18:6.39:6,0,441	1/1:14,0:15:24.04:212,24,0	1/1:15,0:15:23.12:166,23,0	1/1:11,0:11:5.87:34,6,0	1/1:15,0:15:35.61:278,36,0	1/1:13,0:13:8.34:45,8,0	1/1:22,0:22:41.11:263,41,0	1/1:11,0:11:29.64:198,30,0	0/1:17,0:17:99:119,0,166	0/1:11,0:11:4.40:141,0,4	1/1:15,0:15:42.57:297,43,0
chr10	78546762	.	CTT	C	4597.28	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=3.946;DP=466;FS=5.142;HRun=3;HaplotypeScore=111.6737;InbreedingCoeff=0.3266;MQ=56.76;MQ0=11;MQRankSum=1.717;QD=11.73;ReadPosRankSum=-1.135;VQSLOD=1.2591;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:25.36:262,25,0	1/1:6,0:6:16.45:111,16,0	0/0:29,0:17:15.72:0,16,325	0/0:29,0:13:9.47:0,9,158	1/1:16,0:15:35.31:233,35,0	0/1:27,0:27:22.81:321,0,23	1/1:16,1:13:18.99:176,19,0	1/1:3,25:25:71.55:532,72,0	0/1:16,0:16:11.43:11,0,218	1/1:18,0:18:33.95:304,34,0	1/1:6,0:6:14.56:89,15,0	1/1:17,2:19:21.57:325,22,0	1/1:17,0:17:9.67:72,10,0	0/0:16,0:16:12.22:0,12,96	1/1:12,0:11:14.58:86,15,0	1/1:13,0:13:21.45:161,21,0	0/1:15,0:14:20.86:21,0,136	0/1:20,0:19:38.64:39,0,300	1/1:14,0:14:26.45:234,26,0	1/1:2,13:15:23.04:166,23,0	1/1:11,0:11:5.87:34,6,0	1/1:13,2:15:35.78:242,36,0	1/1:2,11:13:8.68:75,9,0	1/1:19,2:21:44.12:319,44,0	1/1:10,0:10:29.64:198,30,0	0/1:16,0:16:54:164,0,54	0/1:10,0:10:5.40:127,0,5	1/1:15,0:15:42.15:296,42,0
chr10	78546764	.	TTCTC	T	729.30	PASS	AB=0.980;AC=21;AF=0.477;AN=44;BaseQRankSum=-1.565;DP=478;FS=0.000;HRun=0;HaplotypeScore=141.9805;InbreedingCoeff=0.3558;MQ=56.09;MQ0=14;MQRankSum=-1.323;QD=3.54;ReadPosRankSum=-0.372;VQSLOD=2.4171;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:22.18:22,0,68	0/0:6,0:6:2.98:0,3,21	./.	./.	./.	0/0:28,0:28:23.64:0,24,318	0/1:17,0:14:0.35:0,0,79	./.	1/1:15,1:17:12.03:148,12,0	0/0:19,0:18:1.25:0,1,3	./.	0/1:19,0:20:23.32:23,0,67	0/1:15,0:15:4.18:103,0,4	1/1:7,8:16:8.79:131,9,0	0/1:12,0:11:0:0,0,0	0/0:13,0:13:7.83:0,8,66	1/1:12,3:14:11.77:326,12,0	0/0:21,0:20:23.43:0,23,307	0/0:15,0:14:5.29:0,5,22	0/0:17,0:17:2.97:0,3,20	1/1:12,0:12:2.22:7,2,0	1/1:16,0:16:5.74:38,6,0	1/1:11,0:11:2.96:19,3,0	1/1:21,0:21:2.80:21,3,0	./.	0/0:17,0:17:24.07:0,24,268	1/1:10,0:10:3:28,3,0	0/0:15,0:15:0:0,0,0
chr10	78546834	.	AGTGTGTGT	A	825.54	PASS	AB=0.813;AC=13;AF=0.250;AN=52;BaseQRankSum=2.762;DP=492;FS=5.776;HRun=0;HaplotypeScore=147.2722;InbreedingCoeff=0.5860;MQ=49.80;MQ0=21;MQRankSum=-3.811;QD=6.77;ReadPosRankSum=0.721;VQSLOD=2.1091;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,6:21:0.89:2,1,0	0/0:4,0:6:9.03:0,9,308	./.	./.	0/0:13,0:13:6.02:0,6,195	1/1:12,6:17:6.02:151,6,0	1/1:14,5:19:9.03:223,9,0	0/0:23,0:22:27.09:0,27,937	0/0:14,0:16:30.10:0,30,1033	0/0:19,0:20:45.15:0,45,1549	0/0:10,0:9:2.74:0,3,12	1/1:11,4:15:6.02:151,6,0	0/1:10,1:13:11.73:141,0,12	0/0:18,0:19:27.08:0,27,953	0/0:17,0:15:15.05:0,15,462	0/0:9,0:12:8.96:0,9,156	0/0:17,0:18:36.12:0,36,964	0/0:16,0:15:24.08:0,24,779	0/0:13,0:16:22:0,22,580	0/0:12,0:11:3.48:0,3,115	0/0:16,0:12:6.61:0,7,244	0/0:3,6:10:0:0,0,0	1/1:7,3:13:2.88:75,3,0	1/1:16,6:22:9.18:227,9,0	0/0:6,0:18:15.04:0,15,444	0/0:19,0:18:30.09:0,30,1050	0/0:13,0:20:21.07:0,21,668	0/0:4,0:3:3.01:0,3,105
chr10	78547479	.	GA	G	544.73	PASS	AB=0.861;AC=6;AF=0.107;AN=56;BaseQRankSum=5.558;DP=514;FS=20.496;HRun=10;HaplotypeScore=57.5059;InbreedingCoeff=0.5357;MQ=65.13;MQ0=14;MQRankSum=0.909;QD=8.79;ReadPosRankSum=1.291;VQSLOD=0.5966;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:66.13:0,66,700	0/0:7,0:7:18.05:0,18,199	0/0:12,0:6:8.57:0,9,51	0/0:16,0:10:20.11:0,20,165	0/0:22,0:22:56.96:0,57,609	0/0:11,0:11:33.09:0,33,365	0/0:10,1:11:4.03:0,4,273	0/0:31,0:29:66.15:0,66,717	0/0:20,0:18:42.09:0,42,453	0/1:18,2:18:29.41:29,0,360	0/0:15,0:15:39.01:0,39,404	0/0:16,0:16:38.94:0,39,395	0/0:3,0:15:31.38:0,31,162	0/0:13,0:13:39.01:0,39,407	0/0:17,0:17:42.10:0,42,456	0/1:10,3:13:22.02:22,0,235	0/0:31,1:31:48.97:0,49,742	0/0:22,1:22:25.19:0,25,503	0/0:32,0:32:78.20:0,78,855	0/0:30,0:29:71.92:0,72,779	0/0:8,0:7:12.03:0,12,132	0/0:12,0:12:29.76:0,30,332	0/0:17,0:16:45.12:0,45,497	0/0:19,0:19:42.11:0,42,464	0/0:15,0:15:36.09:0,36,392	1/1:2,23:25:62.95:547,63,0	0/0:24,0:23:61.01:0,61,641	1/1:2,2:4:8.29:77,8,0
chr10	78548140	.	TTG	T	130.17	PASS	AB=0.897;AC=10;AF=0.185;AN=54;BaseQRankSum=4.445;DP=633;FS=1.943;HRun=0;HaplotypeScore=106.9659;InbreedingCoeff=-0.0387;MQ=62.09;MQ0=15;MQRankSum=0.129;QD=0.73;ReadPosRankSum=1.753;VQSLOD=2.1437;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:27:8.61:0,9,77	0/0:12,0:11:12.04:0,12,179	./.	0/0:33,0:19:0:0,0,0	0/0:30,0:30:6.77:0,7,214	0/0:19,0:23:11.60:0,12,103	0/0:25,0:29:5.96:0,6,45	0/0:40,0:38:9.75:0,10,70	0/1:12,0:12:2.09:2,0,122	0/0:20,0:20:15:0,15,166	0/1:21,3:24:32.39:32,0,327	0/0:12,0:17:11.99:0,12,101	0/0:19,0:28:11.93:0,12,124	0/1:16,2:18:23.72:24,0,79	0/1:19,1:20:55.51:56,0,200	0/0:15,0:15:21.07:0,21,313	0/0:20,1:22:6.40:0,6,486	0/0:11,0:13:11.95:0,12,112	0/0:12,0:11:3:0,3,27	0/1:27,2:29:29.38:29,0,391	0/1:28,4:31:9.18:9,0,232	0/0:21,0:27:26.58:0,27,230	0/0:18,0:22:2.84:0,3,26	0/0:19,0:32:11.74:0,12,90	0/0:18,0:18:12.93:0,13,320	0/1:12,0:16:27.52:53,0,28	0/1:14,3:17:17.68:18,0,163	1/1:6,0:8:8.52:42,9,0
chr10	78548197	.	AGAAAG	A	1435.65	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.044;DP=465;FS=1.771;HRun=0;HaplotypeScore=103.2473;InbreedingCoeff=0.9884;MQ=83.70;MQ0=1;MQRankSum=-5.373;QD=49.51;ReadPosRankSum=2.598;VQSLOD=4.0900;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:33.11:0,33,1046	0/0:8,0:8:21.07:0,21,625	0/0:28,0:27:68.40:0,68,2097	0/0:28,0:26:70.94:0,71,1925	0/0:14,0:14:39.13:0,39,1231	0/0:16,0:16:39.13:0,39,1237	0/0:16,0:16:48.12:0,48,1446	0/0:19,0:19:54.19:0,54,1648	0/0:12,0:12:36.12:0,36,1140	0/0:18,0:18:51.17:0,51,1529	0/0:17,0:17:51.16:0,51,1548	0/0:13,0:13:33.11:0,33,975	0/0:19,0:19:44.89:0,45,1335	0/0:14,0:14:42.14:0,42,1283	0/0:19,0:18:57.11:0,57,1658	0/0:14,0:14:42.14:0,42,1324	0/0:23,0:23:60.21:0,60,1830	0/0:11,0:11:33.11:0,33,969	0/0:9,0:9:24.08:0,24,664	0/0:24,0:24:69.19:0,69,2062	0/0:17,0:17:51.17:0,51,1513	0/0:15,0:15:45.10:0,45,1245	0/0:9,0:9:18.53:0,19,572	0/0:24,0:24:42.08:0,42,1216	0/0:14,0:14:42.14:0,42,1326	1/1:4,18:22:54.18:1165,54,0	0/0:21,0:21:63.20:0,63,1912	1/1:1,6:7:18.06:391,18,0
chr10	78549369	.	T	TA	6537.29	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.968;DP=648;FS=7.103;HRun=1;HaplotypeScore=75.4785;InbreedingCoeff=0.9972;MQ=85.38;MQ0=0;MQRankSum=-2.754;QD=37.57;ReadPosRankSum=2.870;VQSLOD=5.4092;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:17:45.03:606,45,0	0/0:9,0:9:27.09:0,27,378	0/0:24,0:24:72.18:0,72,940	0/0:19,0:18:45.15:0,45,616	0/0:34,0:34:99:0,102,1409	1/1:1,26:28:81.20:1148,81,0	1/1:0,17:17:48.16:674,48,0	0/0:36,0:36:99:0,102,1409	0/0:20,0:20:60.20:0,60,838	0/0:38,0:38:99:0,114,1595	0/0:22,0:22:63.21:0,63,881	1/1:0,23:23:63.21:880,63,0	1/1:0,24:24:63.10:875,63,0	0/0:23,0:23:66.21:0,66,905	0/0:26,0:26:78.25:0,78,1074	0/0:21,0:21:63.21:0,63,880	0/0:18,0:18:51.15:0,51,694	0/0:13,0:13:39.13:0,39,545	0/0:28,0:27:81.25:0,81,1097	0/0:26,0:26:78.26:0,78,1090	0/0:24,0:24:72.24:0,72,1005	1/1:1,24:25:57.10:808,57,0	1/1:2,15:19:50.69:718,51,0	1/1:1,19:21:60.09:828,60,0	0/0:32,0:32:96.32:0,96,1341	0/0:23,0:23:69.23:0,69,963	0/0:33,0:33:93.29:0,93,1283	0/0:5,0:5:15.05:0,15,210
chr10	78550364	.	GA	G	4054.71	PASS	AB=0.735;AC=42;AF=0.750;AN=56;BaseQRankSum=5.600;DP=631;FS=1.495;HRun=14;HaplotypeScore=99.9108;InbreedingCoeff=0.2486;MQ=70.35;MQ0=5;MQRankSum=0.098;QD=7.19;ReadPosRankSum=4.427;VQSLOD=3.0234;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:31:52.72:153,53,0	0/1:2,6:8:6.57:85,0,7	0/0:35,0:16:10.11:0,10,67	0/1:24,2:15:20.19:20,0,79	1/1:8,24:34:46.20:452,46,0	1/1:2,0:30:54.99:160,55,0	1/1:3,0:14:22.40:65,22,0	0/1:19,11:32:10.20:236,0,10	0/0:15,0:16:29.19:0,29,297	0/1:13,13:32:53.76:218,0,54	1/1:6,12:22:46.77:290,47,0	1/1:1,0:17:30.55:89,31,0	1/1:3,0:12:16.28:48,16,0	0/1:17,1:19:4.18:4,0,212	1/1:6,18:28:55.64:352,56,0	1/1:4,11:22:22.61:222,23,0	0/1:23,5:29:13.59:14,0,421	0/0:14,1:15:15.46:0,15,286	0/1:9,7:17:31.12:101,0,31	1/1:8,17:28:22.77:277,23,0	0/1:1,4:5:15.93:50,0,16	1/1:1,0:13:24.44:71,24,0	1/1:3,1:21:32.56:95,33,0	1/1:1,0:11:20.36:60,20,0	1/1:12,26:41:2.14:424,2,0	1/1:6,0:25:37.99:112,38,0	1/1:7,21:30:7.84:326,8,0	1/1:1,1:17:36.51:129,37,0
chr10	78550692	.	AAC	A	4747.30	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.727;DP=769;FS=4.825;HRun=0;HaplotypeScore=95.0706;InbreedingCoeff=0.9865;MQ=84.37;MQ0=0;MQRankSum=-4.018;QD=42.77;ReadPosRankSum=3.408;VQSLOD=6.8016;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,2290	0/0:3,0:3:9.03:0,9,182	0/0:26,0:26:78.25:0,78,1471	0/0:25,0:25:70.12:0,70,1321	0/0:26,0:26:78.26:0,78,1548	0/0:21,0:21:63.22:0,63,1269	0/0:31,0:31:93.32:0,93,1873	0/0:30,0:30:90.30:0,90,1746	0/0:22,0:22:66.23:0,66,1338	0/0:40,0:40:99:0,120,2352	0/0:20,0:20:54.19:0,54,1068	1/1:0,25:25:57.19:930,57,0	1/1:0,28:28:75.26:1224,75,0	0/0:45,0:45:99:0,135,2685	0/0:39,0:39:99:0,117,2336	0/0:21,0:21:63.22:0,63,1268	0/0:28,0:28:84.29:0,84,1705	0/0:26,0:26:78.22:0,78,1499	0/0:23,0:23:69.21:0,69,1309	0/0:33,0:33:99:0,99,1993	0/0:59,0:59:99:0,175,3502	1/1:0,13:13:33.11:538,33,0	1/1:0,26:26:72.15:1174,72,0	1/1:0,19:19:54.18:881,54,0	0/0:24,0:24:69.24:0,69,1401	0/0:37,0:37:99:0,108,2139	0/0:25,0:25:75.26:0,75,1522	0/0:15,0:15:45.15:0,45,895
chr10	78551623	.	GGATA	G	6174.01	PASS	AB=0.949;AC=40;AF=0.800;AN=50;BaseQRankSum=1.237;DP=638;FS=1.127;HRun=0;HaplotypeScore=152.1310;InbreedingCoeff=0.6919;MQ=63.11;MQ0=5;MQRankSum=-2.649;QD=12.45;ReadPosRankSum=-0.942;VQSLOD=4.1574;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,22:40:36.32:832,36,0	1/1:7,0:10:12.02:117,12,0	./.	./.	1/1:11,5:19:14.97:202,15,0	1/1:13,14:27:57.19:858,57,0	1/1:12,6:16:14.96:230,15,0	./.	0/1:28,1:29:3.96:4,0,839	1/1:15,0:36:19.16:242,19,0	1/1:6,0:14:14.96:139,15,0	1/1:18,7:24:33.11:500,33,0	1/1:17,11:29:30.10:443,30,0	0/1:25,2:27:50.10:50,0,775	1/1:22,8:30:27.09:410,27,0	1/1:17,0:28:13.12:229,13,0	0/0:14,0:20:30.10:0,30,528	0/0:18,0:19:14.29:0,14,220	1/1:11,0:13:9.01:84,9,0	1/1:12,0:23:32.97:293,33,0	1/1:17,0:17:3:28,3,0	1/1:17,10:27:39.13:598,39,0	1/1:16,6:22:21.06:302,21,0	1/1:8,7:15:18.06:270,18,0	1/1:11,0:20:15.49:164,15,0	0/0:26,0:30:16.75:0,17,517	1/1:20,0:25:15.71:177,16,0	0/0:2,0:7:9.03:0,9,157
chr10	78551738	.	AGAT	A	337.06	PASS	AB=0.995;AC=8;AF=0.143;AN=56;BaseQRankSum=4.940;DP=705;FS=4.031;HRun=0;HaplotypeScore=274.3646;InbreedingCoeff=0.0059;MQ=48.05;MQ0=6;MQRankSum=-1.450;QD=1.76;ReadPosRankSum=-4.538;VQSLOD=1.0425;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,1:28:45.57:46,0,514	0/1:11,0:11:25.14:25,0,433	0/0:15,0:11:27.03:0,27,601	0/0:8,0:4:11.97:0,12,215	0/0:28,0:28:51.02:0,51,1119	0/0:24,1:25:39.12:0,39,818	0/0:14,0:13:27.08:0,27,585	0/0:38,0:36:93.21:0,93,1988	0/0:31,0:31:90.31:0,90,2010	0/1:37,0:34:99:155,0,1555	0/0:19,0:18:38.64:0,39,871	0/0:28,2:29:30.91:0,31,1158	0/0:30,2:31:62.30:0,62,1402	0/0:23,0:23:69.24:0,69,1549	0/1:37,0:37:14.60:15,0,1134	0/1:28,0:28:30.65:31,0,1011	0/0:13,0:13:33.11:0,33,705	0/0:27,1:27:68.23:0,68,1440	0/0:21,0:19:57.20:0,57,1234	0/0:39,0:37:21.33:0,21,1465	1/1:14,0:14:0.94:15,1,0	0/0:20,3:22:44.73:0,45,1012	0/0:25,1:25:43.90:0,44,1012	0/0:13,0:13:18.05:0,18,408	0/0:26,0:25:44.17:0,44,1004	0/0:47,1:44:19.81:0,20,2610	0/1:35,0:35:99:181,0,1058	0/0:13,0:13:10.56:0,11,656
chr10	78551777	.	GCATAGATA	G	252.77	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=0.629;DP=703;FS=8.519;HRun=0;HaplotypeScore=257.7945;InbreedingCoeff=0.6738;MQ=51.59;MQ0=15;MQRankSum=1.774;QD=3.37;ReadPosRankSum=-2.861;VQSLOD=0.5332;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,2:27:2.22:87,2,0	0/0:13,0:13:20.97:0,21,431	0/0:27,0:11:17.96:0,18,308	0/0:16,0:5:1.25:0,1,3	0/0:30,0:29:42.08:0,42,912	1/1:17,6:23:15:255,15,0	1/1:6,0:6:2.99:24,3,0	0/0:58,0:51:96.26:0,96,1847	0/0:32,0:32:81.26:0,81,2677	0/0:33,0:33:46.06:0,46,738	0/0:21,0:21:21.05:0,21,469	0/0:29,0:29:39.08:0,39,1059	0/0:33,0:33:60.17:0,60,1704	0/0:26,0:26:54:0,54,1741	0/0:29,0:29:15.02:0,15,269	0/0:22,0:21:14.93:0,15,215	0/0:18,0:18:42.14:0,42,1251	0/1:18,0:18:6:6,0,614	0/0:26,0:24:44.21:0,44,806	0/0:30,0:30:42.13:0,42,1012	./.	0/0:17,0:16:33.11:0,33,1191	0/0:27,0:27:69.21:0,69,1839	0/0:15,0:16:27.09:0,27,788	0/0:21,0:21:18.06:0,18,478	0/0:48,0:47:99:0,109,2851	0/0:30,0:30:36.49:0,36,561	0/0:16,0:15:41.96:0,42,916
chr10	78551810	.	GATACATAGATAC	G	5351.88	PASS	AB=0.921;AC=21;AF=0.404;AN=52;BaseQRankSum=1.402;DP=631;FS=2.938;HRun=0;HaplotypeScore=211.1385;InbreedingCoeff=0.7492;MQ=45.68;MQ0=22;MQRankSum=-1.868;QD=18.84;ReadPosRankSum=-3.338;VQSLOD=3.2878;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:15.42:15,0,516	1/1:7,4:11:18.03:387,18,0	0/0:22,0:4:11.69:0,12,126	0/0:29,0:6:12.04:0,12,286	1/1:20,10:30:27.09:670,27,0	0/0:25,0:25:27.09:0,27,799	0/0:5,0:4:3.01:0,3,79	1/1:28,0:20:15.03:231,15,0	0/0:33,0:33:78.26:0,78,2866	1/1:21,9:31:63.81:1871,64,0	./.	0/0:25,0:23:30.02:0,30,1256	0/0:36,0:36:66.14:0,66,2712	0/0:21,0:21:60.21:0,60,2131	1/1:19,4:23:12.04:263,12,0	0/1:11,4:14:0:0,0,0	0/0:23,0:23:39.34:0,39,1439	0/0:21,0:21:24.38:0,24,1407	1/1:9,11:16:30.08:704,30,0	1/1:13,11:24:12.03:174,12,0	./.	0/0:15,0:15:39.13:0,39,1611	0/0:29,0:29:75.26:0,75,3550	0/0:17,0:17:21.07:0,21,992	1/1:9,10:19:6.02:123,6,0	0/1:34,1:33:31.56:32,0,2631	1/1:21,5:25:36.07:883,36,0	0/0:15,0:14:29.97:0,30,1275
chr10	78551825	.	A	AGATG	2106.04	PASS	AB=0.939;AC=11;AF=0.204;AN=54;BaseQRankSum=0.421;DP=608;FS=10.992;HRun=0;HaplotypeScore=144.3263;InbreedingCoeff=-0.0225;MQ=46.86;MQ0=17;MQRankSum=-2.999;QD=9.93;ReadPosRankSum=-2.305;VQSLOD=2.2317;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:6.12:6,0,233	1/1:9,1:10:18.03:387,18,0	0/0:23,0:5:12.02:0,12,151	0/0:25,0:8:17.88:0,18,292	0/1:20,5:25:99:379,0,159	0/0:29,0:29:39.12:0,39,751	0/0:9,0:8:6.02:0,6,125	0/1:17,1:11:42.49:104,0,42	0/0:28,0:28:81.28:0,81,1677	0/1:28,3:31:99:418,0,308	./.	0/0:23,0:21:33.06:0,33,638	0/0:31,0:31:73.21:0,73,1423	0/0:23,0:23:69.19:0,69,1347	0/1:19,1:20:66.23:66,0,103	0/0:14,0:13:2.98:0,3,22	0/0:25,0:25:49.44:0,49,936	0/0:23,0:23:33.87:0,34,952	0/1:15,0:13:99:209,0,138	0/1:24,2:26:40.87:41,0,240	0/0:13,0:13:0:0,0,0	0/0:14,0:14:42.14:0,42,880	0/0:35,0:35:93.31:0,93,1894	0/0:13,0:13:21.07:0,21,440	0/1:19,1:19:59.88:60,0,88	0/0:36,0:34:67.17:0,67,1748	0/1:22,2:23:99:583,0,108	0/0:11,0:11:30.10:0,30,628
chr10	78551898	.	TAC	T	2663.64	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=1.135;DP=699;FS=0.485;HRun=0;HaplotypeScore=116.1384;InbreedingCoeff=0.8588;MQ=53.03;MQ0=13;MQRankSum=2.078;QD=14.40;ReadPosRankSum=0.962;VQSLOD=3.2548;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,7:12:3.01:46,3,0	0/0:10,0:10:18.06:0,18,347	0/0:22,0:9:19.86:0,20,307	0/1:24,0:4:7.97:17,0,8	0/0:33,0:33:54.18:0,54,1041	1/1:3,17:20:27.09:413,27,0	1/1:1,14:14:24.08:367,24,0	0/0:66,0:58:99:0,169,2947	0/0:28,0:28:80.97:0,81,1466	0/0:40,0:40:89.90:0,90,1829	0/0:20,0:20:15.05:0,15,289	1/1:4,16:18:18.06:275,18,0	1/1:4,20:24:30.04:437,30,0	0/0:27,0:27:78.19:0,78,1315	0/0:31,0:31:42.14:0,42,793	0/0:24,0:24:30.10:0,30,579	0/0:19,0:19:32.39:0,32,598	0/0:22,0:22:60.15:0,60,1073	0/0:22,0:19:51.13:0,51,899	0/0:40,0:40:83.31:0,83,1567	0/0:17,0:17:18.06:0,18,347	1/1:4,21:25:24.08:366,24,0	1/1:1,38:39:60.20:917,60,0	1/1:2,4:6:2.99:24,3,0	0/0:21,0:20:36.12:0,36,694	0/0:34,0:34:63.40:0,63,754	0/0:31,0:29:54.18:0,54,1012	0/0:6,0:6:14.99:0,15,130
chr10	78551930	.	T	TGATA	7961.13	PASS	AB=0.923;AC=37;AF=0.685;AN=54;BaseQRankSum=3.117;DP=632;FS=22.168;HRun=0;HaplotypeScore=112.5198;InbreedingCoeff=0.8109;MQ=44.19;MQ0=6;MQRankSum=-1.664;QD=17.27;ReadPosRankSum=-1.977;VQSLOD=2.7522;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:12:2.46:2,0,52	1/1:8,6:14:15.02:279,15,0	0/0:20,0:9:20.21:0,20,337	0/0:12,0:3:6.02:0,6,92	1/1:11,20:31:21.05:434,21,0	0/0:15,0:15:6.02:0,6,102	0/0:18,0:17:14.41:0,14,249	1/1:15,3:15:21.04:343,21,0	0/0:30,0:30:81.28:0,81,1434	1/1:18,14:32:87.29:1986,87,0	1/1:3,21:24:6.02:155,6,0	1/1:22,0:21:12.01:156,12,0	1/1:33,0:33:12.40:136,12,0	0/0:27,0:27:69.24:0,69,1228	1/1:16,15:31:24:426,24,0	1/1:8,13:21:27.09:586,27,0	0/0:20,0:20:32.84:0,33,555	0/0:20,0:22:36.14:0,36,794	1/1:14,3:16:27.05:441,27,0	1/1:17,27:45:42.10:877,42,0	1/1:10,0:10:9.01:178,9,0	1/1:28,0:28:6.01:82,6,0	1/1:34,0:34:4.72:103,5,0	./.	1/1:9,9:18:12.03:201,12,0	1/1:36,0:36:95.33:802,95,0	1/1:11,19:29:30.08:693,30,0	1/1:5,0:5:6:80,6,0
chr10	78551935	.	GATAC	G	4454.37	PASS	AB=0.882;AC=28;AF=0.519;AN=54;BaseQRankSum=1.289;DP=623;FS=14.397;HRun=0;HaplotypeScore=117.1326;InbreedingCoeff=0.3130;MQ=43.54;MQ0=9;MQRankSum=1.123;QD=10.31;ReadPosRankSum=-1.523;VQSLOD=3.1942;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:6.28:0,6,61	0/1:12,2:14:99:114,0,125	0/0:24,0:8:20.21:0,20,486	0/0:16,0:5:11.88:0,12,199	0/1:27,3:30:99:124,0,132	0/0:15,0:15:5.86:0,6,102	0/0:16,0:15:13.60:0,14,187	1/1:12,1:10:21.04:263,21,0	0/0:29,0:29:81.28:0,81,2090	0/1:25,5:30:99:348,0,743	1/1:24,0:24:4.56:35,5,0	1/1:7,15:21:12.01:156,12,0	1/1:6,24:30:14.57:196,15,0	0/0:27,0:27:75.26:0,75,1952	1/1:22,6:28:20.46:203,20,0	1/1:19,2:21:23.11:339,23,0	0/0:21,0:21:42.02:0,42,876	0/0:22,0:22:44.36:0,44,1172	0/1:11,2:12:99:126,0,379	0/1:39,5:44:99:191,0,178	0/1:7,2:9:20.53:21,0,62	1/1:4,24:28:6.01:82,6,0	1/1:6,27:33:6.25:106,6,0	./.	0/1:18,1:19:12.09:112,0,12	1/1:9,27:36:99:1689,108,0	0/1:26,3:30:99:223,0,141	1/1:7,1:8:11.97:126,12,0
chr10	78551957	.	TAC	T	998.44	PASS	AB=0.923;AC=17;AF=0.304;AN=56;BaseQRankSum=1.109;DP=633;FS=9.671;HRun=0;HaplotypeScore=121.7976;InbreedingCoeff=-0.0414;MQ=43.59;MQ0=8;MQRankSum=-0.109;QD=3.49;ReadPosRankSum=-5.469;VQSLOD=-0.3918;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,1:14:3.80:4,0,22	0/0:13,0:13:9.01:0,9,101	0/0:30,0:9:17.21:0,17,340	0/0:23,0:6:18.06:0,18,317	0/0:34,0:34:12.16:0,12,181	0/1:3,13:16:14.02:41,0,14	1/1:4,8:12:6.57:74,7,0	0/1:19,0:18:98.44:98,0,203	0/0:25,0:25:66.21:0,66,1225	0/0:31,0:30:66.92:0,67,661	0/1:21,0:21:34.28:34,0,37	1/1:16,0:16:2.45:47,2,0	0/1:31,1:32:32.61:123,0,33	0/0:26,0:26:75.26:0,75,1428	0/1:25,0:25:28.93:29,0,59	0/1:16,2:18:53.43:63,0,53	0/0:20,0:20:45.15:0,45,835	0/0:18,0:18:39.06:0,39,674	0/1:10,0:10:15.67:16,0,175	0/0:52,0:52:24.70:0,25,336	0/0:8,0:8:9:0,9,77	0/0:25,0:25:5.92:0,6,40	0/1:30,2:32:19.60:85,0,20	1/1:6,4:10:3:27,3,0	0/1:18,4:22:52.02:64,0,52	0/1:37,0:37:99:453,0,194	0/0:37,0:37:16.41:0,16,260	0/0:5,0:5:12.34:0,12,91
chr10	78551959	.	C	CAT	8081.98	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=4.345;DP=632;FS=6.333;HRun=0;HaplotypeScore=99.9228;InbreedingCoeff=0.7650;MQ=43.93;MQ0=9;MQRankSum=-0.569;QD=16.46;ReadPosRankSum=-3.706;VQSLOD=3.3820;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,8:14:1.11:50,1,0	1/1:3,9:12:6.02:104,6,0	0/0:31,0:10:12.04:0,12,160	0/0:24,0:6:18.06:0,18,221	1/1:7,27:34:27.06:412,27,0	1/1:14,2:16:8.98:149,9,0	1/1:9,2:11:11.65:200,12,0	1/1:2,18:21:57.17:910,57,0	0/0:23,0:23:60.18:0,60,781	1/1:7,25:31:72.18:1236,72,0	1/1:5,17:22:6:67,6,0	1/1:4,12:16:9.03:147,9,0	1/1:8,24:32:27.41:426,27,0	0/0:25,0:25:75.25:0,75,996	1/1:9,13:22:6.01:66,6,0	1/1:10,9:19:14.40:161,14,0	0/0:21,0:21:48.07:0,48,596	0/0:17,0:17:36.02:0,36,419	1/1:1,9:10:27.09:458,27,0	1/1:10,39:51:36.08:540,36,0	1/1:4,5:10:6:76,6,0	1/1:6,17:23:0.77:48,1,0	1/1:12,20:31:18.06:302,18,0	1/1:8,2:10:3.01:52,3,0	1/1:8,14:22:24.04:379,24,0	1/1:8,30:38:90.31:1529,90,0	1/1:6,29:37:32.37:562,32,0	1/1:1,5:6:12.04:208,12,0
chr10	78552006	.	GATAC	G	3089.17	PASS	AB=0.863;AC=28;AF=0.500;AN=56;BaseQRankSum=1.908;DP=580;FS=1.410;HRun=0;HaplotypeScore=162.1722;InbreedingCoeff=0.3971;MQ=45.16;MQ0=12;MQRankSum=-2.448;QD=8.15;ReadPosRankSum=3.762;VQSLOD=2.8988;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:21.04:0,21,421	0/1:4,5:9:6.32:79,0,6	0/0:19,0:5:11.92:0,12,94	0/0:17,0:4:6:0,6,55	1/1:16,6:22:13.76:158,14,0	0/1:16,0:16:3.94:4,0,234	0/0:11,0:10:23.98:0,24,201	1/1:46,0:43:98.59:794,99,0	0/0:21,0:21:35.15:0,35,772	1/1:17,7:22:59.49:550,59,0	1/1:7,5:12:8.99:75,9,0	1/1:13,4:16:8.93:68,9,0	1/1:21,8:29:19.86:199,20,0	0/0:21,0:21:56.98:0,57,964	0/1:13,1:14:14.36:14,0,50	0/1:10,1:11:9.54:68,0,10	0/0:24,0:22:44.60:0,45,396	0/0:18,0:17:11.66:0,12,210	1/1:17,4:17:47.90:446,48,0	1/1:29,9:38:11.17:197,11,0	0/1:9,2:11:11.31:77,0,11	0/1:13,2:15:24.46:38,0,24	1/1:17,10:27:19.05:152,19,0	0/1:9,1:10:17.32:19,0,17	0/1:19,8:25:38.59:150,0,39	0/0:36,0:36:26.45:0,26,685	1/1:20,10:29:1.42:196,1,0	0/0:11,0:11:14.15:0,14,245
chr10	78552010	.	C	CATAG	992.64	PASS	AB=0.982;AC=21;AF=0.438;AN=48;BaseQRankSum=0.050;DP=569;FS=19.118;HRun=0;HaplotypeScore=174.2994;InbreedingCoeff=0.4540;MQ=46.23;MQ0=11;MQRankSum=-0.710;QD=3.61;ReadPosRankSum=0.728;VQSLOD=1.6851;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:25:3.48:3,0,159	0/0:9,0:9:3.35:0,3,27	./.	./.	0/1:23,0:23:1.41:1,0,17	1/1:16,3:19:18.03:308,18,0	1/1:12,0:11:2.99:24,3,0	./.	0/0:21,0:22:24.06:0,24,324	0/0:24,0:22:11.99:0,12,105	1/1:13,0:13:2.97:20,3,0	./.	1/1:26,0:26:2.37:8,2,0	0/0:18,0:18:30.08:0,30,434	0/0:16,0:16:1.89:0,2,3	0/0:13,0:13:8.56:0,9,54	1/1:17,6:22:6.02:139,6,0	1/1:15,0:17:8.91:97,9,0	0/0:22,0:18:13.40:0,13,90	0/1:37,0:37:1.92:2,0,17	0/1:9,0:10:15.50:21,0,15	0/0:13,0:13:0.94:0,1,1	0/1:22,0:21:0.13:0,0,0	0/0:10,0:10:2.98:0,3,21	0/0:28,0:26:9.55:0,10,67	1/1:33,0:35:33.47:402,33,0	0/0:28,0:27:1.22:0,1,3	1/1:11,0:11:12.90:114,13,0
chr10	78552057	.	AGATAGATC	A	5774.42	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=0.467;DP=528;FS=6.636;HRun=0;HaplotypeScore=194.8583;InbreedingCoeff=0.7881;MQ=57.01;MQ0=4;MQRankSum=2.990;QD=14.55;ReadPosRankSum=0.512;VQSLOD=3.5156;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:81.53:82,0,539	1/1:8,3:11:23.54:239,24,0	0/0:8,0:6:11.10:0,11,119	0/0:5,0:4:2.60:0,3,39	1/1:23,2:25:55.89:441,56,0	0/1:20,0:20:99:101,0,230	1/1:12,0:12:18.40:144,18,0	1/1:30,0:27:44.36:491,44,0	0/0:19,0:19:53.71:0,54,1219	1/1:24,0:24:17.36:469,17,0	1/1:20,0:20:32.71:269,33,0	1/1:14,3:16:22.75:173,23,0	1/1:16,3:19:26.46:215,26,0	0/0:16,0:16:44.94:0,45,1356	1/1:22,0:22:36.03:395,36,0	1/1:22,1:23:41.64:352,42,0	0/0:15,0:15:25.82:0,26,405	0/0:20,0:20:37.31:0,37,504	1/1:18,3:19:54.84:607,55,0	1/1:19,7:26:31.74:303,32,0	1/1:12,0:12:18.73:199,19,0	1/1:12,2:14:29.99:275,30,0	1/1:15,8:23:27.08:204,27,0	1/1:7,0:7:10.99:89,11,0	1/1:17,4:20:38.39:381,38,0	0/0:32,0:32:69.50:0,69,1289	1/1:22,3:24:43.07:348,43,0	0/0:16,0:16:45.01:0,45,684
chr10	78552061	.	AGATC	A	5751.58	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=-3.025;DP=539;FS=10.500;HRun=0;HaplotypeScore=164.6148;InbreedingCoeff=0.7870;MQ=59.99;MQ0=2;MQRankSum=2.072;QD=14.10;ReadPosRankSum=-2.129;VQSLOD=3.6896;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:99:126,0,191	1/1:11,0:11:19.49:186,19,0	0/0:11,0:9:20.04:0,20,187	0/0:5,0:4:2.13:0,2,38	1/1:26,0:26:46.17:426,46,0	0/1:23,0:23:36.84:255,0,37	1/1:14,0:14:24.36:188,24,0	1/1:31,0:29:65.78:565,66,0	0/0:17,0:17:16.90:0,17,629	1/1:24,1:25:70.88:738,71,0	1/1:17,4:21:38.92:319,39,0	1/1:18,0:17:25.49:196,25,0	1/1:21,0:21:20.24:181,20,0	0/0:18,0:18:47.85:0,48,856	1/1:22,0:22:20.21:180,20,0	1/1:23,0:23:34.09:293,34,0	0/0:14,0:14:22.81:0,23,239	0/0:19,0:19:38.71:0,39,383	1/1:21,0:20:51.91:538,52,0	1/1:26,0:26:31.63:269,32,0	1/1:10,0:10:16.82:165,17,0	1/1:15,0:15:27.30:242,27,0	1/1:23,0:23:31.26:249,31,0	1/1:8,0:8:10.67:97,11,0	1/1:21,0:20:15.28:157,15,0	0/0:32,0:32:60.24:0,60,807	1/1:24,0:23:43.86:380,44,0	0/0:15,0:15:44.86:0,45,431
chr10	78554129	.	C	CAA	6158.44	PASS	AB=0.692;AC=42;AF=0.750;AN=56;BaseQRankSum=3.085;DP=529;FS=1.669;HRun=13;HaplotypeScore=93.5450;InbreedingCoeff=0.6967;MQ=53.06;MQ0=10;MQRankSum=-2.162;QD=14.63;ReadPosRankSum=-2.627;VQSLOD=3.5584;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,4:32:41.55:400,42,0	1/1:3,4:8:17.96:190,18,0	0/0:5,0:3:6.99:0,7,41	0/0:9,0:7:11.79:0,12,90	0/1:14,3:19:3.39:180,0,3	1/1:6,3:19:39.05:395,39,0	1/1:9,3:19:15.49:155,15,0	1/1:13,7:22:21.37:216,21,0	0/0:10,0:13:23.20:0,23,214	1/1:6,10:21:43.43:432,43,0	1/1:12,5:20:0.43:329,0,0	1/1:6,5:12:13.29:114,13,0	1/1:10,18:30:25.42:519,25,0	0/0:23,0:23:44.44:0,44,373	1/1:6,7:13:36.06:446,36,0	1/1:7,8:19:26.06:302,26,0	0/0:24,0:28:46.72:0,47,467	0/0:27,0:28:32.67:0,33,332	1/1:22,4:27:6.96:344,7,0	1/1:6,10:17:7.34:383,7,0	1/1:5,11:14:27.09:364,27,0	1/1:5,5:11:17.03:181,17,0	1/1:5,9:16:17.54:194,18,0	1/1:11,6:18:2.53:97,3,0	1/1:4,10:17:29.58:363,30,0	0/1:12,2:32:28.69:175,0,29	1/1:5,12:18:29.07:343,29,0	1/1:2,0:5:9.98:35,10,0
chr10	78554331	.	GAGGGTAAAGAAAGC	G	8756.92	PASS	AC=22;AF=0.407;AN=54;BaseQRankSum=14.272;DP=568;FS=8.964;HRun=0;HaplotypeScore=215.2603;InbreedingCoeff=0.9767;MQ=82.38;MQ0=0;MQRankSum=-10.929;QD=56.86;ReadPosRankSum=-0.580;VQSLOD=3.5026;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,6554	./.	0/0:18,0:18:48.13:0,48,2163	0/0:26,0:26:66.70:0,67,4259	1/1:1,13:14:29.93:854,30,0	0/0:24,0:24:66.21:0,66,4044	0/0:26,0:26:66.22:0,66,4190	1/1:4,15:19:45.15:1552,45,0	0/0:36,0:36:99:0,108,6906	1/1:4,13:17:33.05:1009,33,0	1/1:2,4:6:8.88:162,9,0	0/0:34,0:34:99:0,99,6503	0/0:19,0:19:57.18:0,57,3523	0/0:32,0:32:93.32:0,93,6107	1/1:2,9:11:18.06:761,18,0	1/1:2,13:15:30.10:1268,30,0	0/0:45,0:45:99:0,132,8655	0/0:30,0:30:87.28:0,87,5303	1/1:5,6:11:15.05:634,15,0	1/1:0,15:15:32.84:806,33,0	1/1:7,18:24:23.25:535,23,0	0/0:6,0:6:18.06:0,18,1256	0/0:16,0:16:48.16:0,48,3098	0/0:24,0:24:69.23:0,69,4435	1/1:1,6:7:8.89:163,9,0	0/0:28,0:28:75.26:0,75,5179	1/1:1,13:14:24.02:1014,24,0	0/0:11,0:11:33.11:0,33,2314
chr10	78554679	.	ACC	A	1268.77	PASS	AB=0.766;AC=13;AF=0.232;AN=56;BaseQRankSum=4.372;DP=367;FS=3.615;HRun=2;HaplotypeScore=93.1162;InbreedingCoeff=-0.0898;MQ=47.39;MQ0=7;MQRankSum=-6.067;QD=10.75;ReadPosRankSum=1.393;VQSLOD=0.8672;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:44.15:0,44,809	0/1:4,1:5:26.93:32,0,27	0/0:6,0:4:11.38:0,11,93	0/0:5,0:3:5.22:0,5,40	0/1:6,7:14:42.35:226,0,42	0/0:23,0:23:31.51:0,32,458	0/0:18,0:17:29.95:0,30,323	0/1:10,1:11:29.75:30,0,124	0/0:14,0:14:35.98:0,36,500	0/1:4,5:8:35.07:143,0,35	0/1:1,4:6:5.54:142,0,6	0/0:9,0:9:24.02:0,24,291	0/0:9,0:9:6.21:0,6,167	0/0:13,0:12:29.38:0,29,431	0/1:3,3:6:60.92:100,0,61	0/1:2,1:3:29.44:30,0,29	0/0:28,0:27:75.08:0,75,1050	0/1:19,1:20:22.62:23,0,585	0/1:5,5:10:31.90:185,0,32	0/1:3,0:4:14.28:24,0,14	0/0:5,0:3:8.83:0,9,56	0/0:12,0:12:32.94:0,33,374	0/0:16,0:16:41.71:0,42,525	0/0:27,0:27:54.02:0,54,673	0/1:7,7:17:68.68:247,0,69	0/0:21,2:23:23.54:0,24,682	1/1:2,7:9:19.61:244,20,0	0/0:7,0:7:21.03:0,21,248
chr10	78554681	.	CA	C	826.31	PASS	AB=0.728;AC=35;AF=0.625;AN=56;BaseQRankSum=3.906;DP=356;FS=12.358;HRun=15;HaplotypeScore=88.5237;InbreedingCoeff=0.4288;MQ=49.65;MQ0=7;MQRankSum=-1.653;QD=3.79;ReadPosRankSum=2.271;VQSLOD=0.0519;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:33:51.91:0,52,295	1/1:2,2:4:5.89:38,6,0	0/0:7,0:5:11.70:0,12,76	0/0:5,1:3:5.74:0,6,37	0/1:10,4:13:3.86:12,0,4	0/0:6,0:24:40.88:0,41,233	0/0:8,0:20:32.41:0,32,199	1/1:3,6:8:17.66:114,18,0	0/0:13,1:14:1.61:0,2,118	1/1:7,2:8:5.17:36,5,0	1/1:5,1:6:4.77:24,5,0	1/1:7,2:10:7.78:44,8,0	1/1:4,3:8:4.88:25,5,0	0/0:13,0:12:20.35:0,20,140	1/1:3,2:5:7.71:43,8,0	1/1:2,1:3:2.49:19,2,0	0/1:25,3:27:24.22:24,0,285	0/0:19,1:20:16.54:0,17,230	1/1:5,3:8:8.84:57,9,0	1/1:2,1:3:1.64:16,2,0	1/1:2,3:3:2.51:18,3,0	1/1:5,6:11:16.91:103,17,0	1/1:9,7:16:14.57:96,15,0	0/1:14,11:27:2.40:102,0,2	1/1:10,5:15:9.65:61,10,0	0/1:12,7:21:12.97:83,0,13	1/1:9,0:9:3.60:10,4,0	0/1:2,4:7:6.54:82,0,7
chr10	78554689	.	AAAAAAAATAGACACTATCACACATCTTGTCCATGGGCATGGAT	A	1504.48	PASS	AB=0.902;AC=6;AF=0.107;AN=56;BaseQRankSum=4.189;DP=383;FS=6.207;HRun=0;HaplotypeScore=379.5146;InbreedingCoeff=0.1393;MQ=51.87;MQ0=4;MQRankSum=-2.584;QD=28.93;ReadPosRankSum=3.359;VQSLOD=0.3377;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:66.20:0,66,5820	0/0:5,0:5:9.03:0,9,1091	0/0:8,0:6:18.06:0,18,1164	0/0:7,0:4:12.04:0,12,823	0/1:12,1:13:99:146,0,765	0/0:24,0:24:54.19:0,54,5530	0/0:22,0:21:39.13:0,39,4133	0/0:16,0:16:42.62:0,43,2350	0/0:18,0:18:51.10:0,51,4156	0/0:8,0:8:15.52:0,16,1553	0/1:8,1:9:99:289,0,1268	0/0:11,0:11:30.10:0,30,2982	0/0:9,0:9:18.48:0,18,1346	0/0:14,0:13:36.12:0,36,3059	0/1:4,1:5:99:298,0,585	0/0:4,0:4:6.91:0,7,619	0/0:24,0:23:63.22:0,63,7763	0/0:20,0:20:51.13:0,51,4750	0/0:10,0:10:19.10:0,19,902	0/0:5,0:5:11.54:0,12,730	0/0:7,0:5:6.91:0,7,131	0/0:12,0:12:33.11:0,33,3407	0/0:15,0:15:36.07:0,36,2854	0/0:27,0:27:51.13:0,51,5349	0/1:16,1:17:99:279,0,2046	0/0:25,0:25:61.74:0,62,5695	1/1:6,2:7:5.08:614,5,0	0/0:7,0:7:21.07:0,21,3147
chr10	78555063	.	GA	G	10524.28	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=5.944;DP=685;FS=15.502;HRun=10;HaplotypeScore=90.1480;InbreedingCoeff=0.9572;MQ=79.73;MQ0=2;MQRankSum=-2.716;QD=20.32;ReadPosRankSum=3.008;VQSLOD=4.2110;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,44:48:99:1025,106,0	1/1:1,7:8:15:130,15,0	0/0:41,1:31:6.84:0,7,406	0/0:44,1:27:11.15:0,11,257	1/1:5,42:47:74.75:876,75,0	1/1:2,23:25:62.98:547,63,0	1/1:2,16:18:32.03:352,32,0	1/1:4,20:24:59.98:521,60,0	0/0:14,0:14:39.07:0,39,419	1/1:4,29:33:86.96:750,87,0	1/1:2,15:17:41.98:364,42,0	1/1:2,13:15:32.99:286,33,0	1/1:5,16:21:41.96:364,42,0	0/0:31,0:31:90.19:0,90,973	1/1:1,24:25:68.98:599,69,0	1/1:0,14:14:38.99:339,39,0	0/0:33,0:34:75.53:0,76,980	1/1:4,16:20:44.98:391,45,0	1/1:5,12:17:38.89:320,39,0	1/1:3,14:17:35.98:313,36,0	1/1:3,8:11:20.90:178,21,0	1/1:4,23:27:59.97:521,60,0	1/1:5,23:28:62.98:547,63,0	1/1:3,26:29:74.97:651,75,0	1/1:0,14:14:35.99:313,36,0	1/1:4,19:23:56.98:495,57,0	1/1:4,18:22:11.68:331,12,0	1/1:1,14:15:35.98:312,36,0
chr10	78555332	.	C	CTCATTTCATTTCATT	5733.54	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-1.212;DP=694;FS=1.956;HRun=0;HaplotypeScore=285.6836;InbreedingCoeff=0.7065;MQ=76.92;MQ0=2;MQRankSum=-4.551;QD=26.06;ReadPosRankSum=-4.424;VQSLOD=3.1446;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:96.25:0,96,3132	0/0:8,0:8:18.05:0,18,537	0/0:28,0:26:10.39:0,10,98	0/1:44,0:29:46.73:47,0,82	0/0:28,0:28:51.17:0,51,1788	0/0:20,0:20:45.13:0,45,1581	0/0:16,0:16:39.08:0,39,1088	0/0:33,0:33:15.01:0,15,164	0/0:19,0:19:33.11:0,33,1257	0/0:33,0:33:57.17:0,57,1733	0/0:21,0:21:24.07:0,24,746	1/1:12,12:28:24.08:1474,24,0	1/1:17,13:31:36.12:2263,36,0	0/0:22,0:22:39.08:0,39,979	0/0:21,0:21:39.09:0,39,1089	0/0:21,0:21:39.12:0,39,1331	0/0:18,0:18:27.07:0,27,906	0/0:19,0:19:39.01:0,39,1256	0/0:27,0:27:30.04:0,30,875	0/0:27,0:27:45.14:0,45,1554	0/0:26,0:26:42.06:0,42,1010	1/1:12,13:28:39.11:1115,39,0	1/1:13,13:28:15.90:701,16,0	1/1:12,0:12:8.90:62,9,0	0/0:25,0:25:57.16:0,57,1987	0/1:24,0:24:0.88:1,0,738	0/1:25,0:25:71.09:71,0,1149	0/0:16,0:16:15.05:0,15,469
chr10	78555359	.	CATTTCATTTT	C	1662.75	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.531;DP=688;FS=2.478;HRun=0;HaplotypeScore=235.3526;InbreedingCoeff=0.9810;MQ=70.65;MQ0=5;MQRankSum=-0.408;QD=53.64;ReadPosRankSum=0.876;VQSLOD=3.4458;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,5713	0/0:9,0:9:24.08:0,24,1153	0/0:25,0:20:41.17:0,41,843	0/0:43,0:27:23.10:0,23,840	0/0:28,0:28:81.19:0,81,3177	0/0:20,0:20:60.17:0,60,2551	0/0:25,0:25:72.15:0,72,2375	0/0:26,0:26:66.14:0,66,1388	0/0:18,0:18:48.12:0,48,1949	0/0:37,0:37:96.26:0,96,3461	0/0:17,0:17:33.08:0,33,1285	0/0:31,0:31:57.09:0,57,1593	0/0:26,0:26:48.15:0,48,1914	0/0:19,0:19:57.15:0,57,2171	0/0:22,0:22:60.15:0,60,2212	0/0:18,0:18:54.16:0,54,2454	0/0:19,0:19:54.06:0,54,1951	0/0:21,0:21:63.18:0,63,2456	0/0:29,0:28:81.09:0,81,2051	0/0:31,0:31:78.01:0,78,2905	0/0:24,0:24:63.16:0,63,2323	0/0:32,0:32:66.05:0,66,1783	0/0:25,0:25:45.30:0,45,905	0/0:9,0:9:14.92:0,15,262	0/0:31,0:31:90.24:0,90,3367	1/1:2,19:21:57.08:1306,57,0	0/0:22,0:22:66.15:0,66,2247	1/1:1,9:10:15.05:475,15,0
chr10	78555544	.	AC	A	7645.95	PASS	AB=0.933;AC=25;AF=0.446;AN=56;BaseQRankSum=2.646;DP=644;FS=0.635;HRun=8;HaplotypeScore=93.2611;InbreedingCoeff=0.9512;MQ=69.46;MQ0=0;MQRankSum=-0.138;QD=23.60;ReadPosRankSum=-0.726;VQSLOD=4.6840;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.26:0,87,1040	1/1:1,20:21:60.10:579,60,0	0/0:14,0:14:18.31:0,18,184	0/1:13,0:14:2.64:5,0,3	1/1:1,14:15:42.07:405,42,0	0/0:20,0:20:54.16:0,54,640	0/0:25,0:25:69.20:0,69,817	1/1:3,32:36:90.14:869,90,0	0/0:28,0:28:72.22:0,72,870	1/1:2,33:35:99:956,99,0	1/1:3,14:17:42.06:405,42,0	0/0:2,0:23:48.93:0,49,258	0/0:2,0:21:54.84:0,55,308	0/0:27,0:27:81.24:0,81,964	1/1:0,23:23:63.10:608,63,0	1/1:4,19:23:29.39:468,29,0	0/0:23,0:23:63.18:0,63,750	0/0:21,0:21:51.11:0,51,600	1/1:3,26:29:78.09:742,78,0	1/1:3,28:31:75.11:724,75,0	1/1:3,21:24:63.09:608,63,0	0/0:2,0:19:46.07:0,46,255	0/0:2,0:23:60.27:0,60,306	0/0:0,0:17:48.84:0,49,248	1/1:2,23:25:63.10:608,63,0	0/0:4,0:25:60.60:0,61,329	1/1:3,28:31:69.07:666,69,0	0/0:0,0:3:8.63:0,9,44
chr10	78556922	.	C	CTTCT	22325.55	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=9.653;DP=712;FS=0.279;HRun=0;HaplotypeScore=134.6761;InbreedingCoeff=0.9994;MQ=82.77;MQ0=0;MQRankSum=-11.669;QD=74.17;ReadPosRankSum=0.256;VQSLOD=5.8922;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,2571	1/1:1,6:7:21.07:544,21,0	0/0:22,0:22:49.68:0,50,909	0/0:22,0:23:53.75:0,54,951	1/1:3,24:28:75.22:2023,75,0	0/0:25,0:25:75.26:0,75,1487	0/0:26,0:26:78.27:0,78,1533	1/1:8,29:38:99:2824,108,0	0/0:27,0:27:81.28:0,81,1607	1/1:2,29:33:99:2595,99,0	1/1:0,20:20:60.21:1644,60,0	0/0:24,0:24:69.24:0,69,1350	0/0:29,0:29:87.27:0,87,1657	0/0:22,0:22:63.22:0,63,1258	1/1:3,28:32:93.32:2526,93,0	1/1:1,22:25:63.22:1727,63,0	0/0:16,0:16:48.16:0,48,958	0/0:13,0:13:39.13:0,39,779	1/1:3,20:24:72.25:1943,72,0	1/1:2,24:27:75.22:2001,75,0	1/1:0,21:22:57.20:1513,57,0	0/0:30,0:30:90.28:0,90,1718	0/0:19,0:19:54.17:0,54,1042	0/0:34,0:34:99:0,102,1936	1/1:4,15:21:54.19:1424,54,0	0/0:43,1:44:38.08:0,38,2248	1/1:1,19:24:57.20:1561,57,0	0/0:12,0:12:33.11:0,33,659
chr10	78558307	.	GTCC	G	4610.52	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.888;DP=549;FS=8.508;HRun=0;HaplotypeScore=126.9489;InbreedingCoeff=0.9425;MQ=74.32;MQ0=1;MQRankSum=-2.189;QD=36.02;ReadPosRankSum=3.549;VQSLOD=5.7925;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:93.28:0,93,1897	0/0:1,0:1:3.01:0,3,64	0/0:22,0:17:27.05:0,27,469	0/0:24,0:22:45.05:0,45,775	0/0:16,0:16:35.93:0,36,706	0/0:21,0:21:63.20:0,63,1298	0/0:28,0:28:66.15:0,66,1206	0/0:23,0:23:42.13:0,42,814	0/0:24,0:24:72.23:0,72,1473	0/0:11,0:11:24.03:0,24,430	0/0:8,0:8:21.05:0,21,360	1/1:7,20:27:63.17:937,63,0	1/1:4,24:28:72.20:1077,72,0	0/0:30,0:30:81.26:0,81,1665	0/0:11,0:11:21.07:0,21,432	0/0:19,0:19:48.15:0,48,961	0/0:24,0:24:63.20:0,63,1298	0/0:21,0:20:54.14:0,54,1081	0/0:16,0:16:28.66:0,29,630	0/0:8,0:8:18.06:0,18,379	0/0:32,0:32:72.23:0,72,1435	1/1:11,13:25:51.17:765,51,0	1/1:3,19:22:54.18:827,54,0	1/1:6,20:26:66.22:1004,66,0	0/0:11,0:11:33.11:0,33,687	0/0:26,0:26:57.19:0,57,1159	0/0:7,0:7:12.04:0,12,212	0/0:4,0:4:12.04:0,12,255
chr10	78558348	.	A	ACCT	3452.59	PASS	AB=0.635;AC=22;AF=0.393;AN=56;BaseQRankSum=1.560;DP=512;FS=1.697;HRun=0;HaplotypeScore=131.3667;InbreedingCoeff=0.8174;MQ=60.29;MQ0=0;MQRankSum=-4.993;QD=27.40;ReadPosRankSum=-4.101;VQSLOD=2.6305;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:66.16:0,66,879	1/1:0,4:4:9.03:183,9,0	0/0:22,0:15:15.96:0,16,163	0/0:17,0:12:15.87:0,16,189	1/1:2,8:10:17.89:214,18,0	0/0:26,0:26:48.12:0,48,634	0/0:18,0:18:36.08:0,36,478	0/1:6,5:10:9.37:190,0,9	0/0:26,0:26:63.16:0,63,829	1/1:2,3:5:9.02:150,9,0	0/1:2,5:7:28.95:171,0,29	0/0:29,0:29:60.19:0,60,843	0/0:29,0:29:72.17:0,72,973	0/0:24,0:24:60.18:0,60,823	1/1:2,12:15:18.06:366,18,0	1/1:5,8:13:23.67:485,24,0	0/0:20,0:20:45.09:0,45,601	0/0:29,0:28:62.55:0,63,860	1/1:4,7:11:21.06:375,21,0	1/1:2,10:13:33.07:607,33,0	1/1:11,11:22:17.95:282,18,0	0/0:23,0:23:50.41:0,50,687	0/0:24,0:24:55.05:0,55,743	0/0:32,0:32:81.19:0,81,1120	1/1:3,4:7:12.04:245,12,0	0/0:28,0:28:63.18:0,63,842	1/1:0,7:8:9.03:183,9,0	0/0:5,0:5:15.02:0,15,194
chr10	78558394	.	CT	C	7648.28	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=7.621;DP=527;FS=23.719;HRun=3;HaplotypeScore=72.9326;InbreedingCoeff=0.9426;MQ=70.60;MQ0=0;MQRankSum=1.116;QD=32.97;ReadPosRankSum=2.872;VQSLOD=3.0282;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:75.24:930,75,0	0/0:7,0:7:21.03:0,21,278	0/0:10,0:10:21.05:0,21,287	0/1:8,0:8:3.58:4,0,65	0/0:16,0:16:48.16:0,48,691	1/1:0,22:22:63.20:781,63,0	1/1:1,24:25:72.23:893,72,0	0/0:21,0:21:60.20:0,60,864	0/0:22,0:22:57.19:0,57,821	0/0:12,0:12:33.11:0,33,475	0/0:12,0:12:30.10:0,30,431	1/1:0,21:21:60.19:742,60,0	1/1:0,25:25:75.23:923,75,0	0/0:27,0:27:78.25:0,78,1089	0/0:24,0:24:54.18:0,54,777	0/0:19,0:19:17.65:0,18,654	0/0:18,0:18:54.18:0,54,777	0/0:31,0:30:87.29:0,87,1253	0/0:14,0:14:42.14:0,42,605	0/0:20,0:20:60.16:0,60,840	0/0:15,0:15:36.12:0,36,517	1/1:1,23:24:69.22:855,69,0	1/1:2,18:20:48.15:595,48,0	1/1:4,25:29:66.21:818,66,0	0/0:8,0:8:24.08:0,24,346	1/1:0,24:24:72.22:885,72,0	0/0:19,0:19:42.14:0,42,605	1/1:0,7:7:18.06:223,18,0
chr10	78558564	.	G	GAA	10227.72	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-1.642;DP=538;FS=0.405;HRun=7;HaplotypeScore=73.8709;InbreedingCoeff=0.9830;MQ=90.84;MQ0=0;MQRankSum=-4.383;QD=24.65;ReadPosRankSum=1.739;VQSLOD=3.7992;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:21:40.40:152,40,0	1/1:2,5:7:12.04:197,12,0	0/0:24,0:24:47.99:0,48,516	0/0:25,0:25:63.43:0,63,670	1/1:1,17:18:51.14:777,51,0	1/1:2,0:23:47.41:167,47,0	1/1:0,0:17:32.44:114,32,0	1/1:5,28:33:84.26:1321,84,0	0/0:18,0:18:54.16:0,54,629	1/1:3,6:9:24.08:383,24,0	1/1:1,9:10:27.05:404,27,0	1/1:5,0:22:39.80:140,40,0	1/1:1,0:21:42.41:150,42,0	0/0:19,0:19:51.14:0,51,594	1/1:1,26:30:69.23:1112,69,0	1/1:3,20:24:63.21:1013,63,0	0/0:17,0:17:48.13:0,48,548	0/0:20,0:20:57.15:0,57,650	1/1:4,14:18:45.14:713,45,0	1/1:0,10:10:30.07:443,30,0	1/1:3,23:31:72.23:1122,72,0	1/1:5,0:21:38.33:181,38,0	1/1:1,0:20:42.30:149,42,0	1/1:1,0:16:34.93:123,35,0	1/1:0,9:9:24.08:394,24,0	1/1:4,0:27:57.39:202,57,0	1/1:4,19:24:57.19:935,57,0	1/1:0,0:4:9.98:35,10,0
chr10	78558856	.	GGGGTAGCT	G	5673.11	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.888;DP=609;FS=2.999;HRun=0;HaplotypeScore=158.6498;InbreedingCoeff=0.9709;MQ=72.87;MQ0=1;MQRankSum=-12.555;QD=63.74;ReadPosRankSum=1.665;VQSLOD=5.1241;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.33:0,96,4067	0/0:16,0:16:45.15:0,45,2061	0/0:15,0:15:43.21:0,43,1432	0/0:9,0:8:21.02:0,21,814	0/0:26,0:26:78.27:0,78,3542	0/0:29,0:29:84.27:0,84,3716	0/0:25,0:25:75.26:0,75,3248	0/0:30,0:30:90.31:0,90,3824	0/0:15,0:15:45.15:0,45,2079	0/0:31,0:31:93.31:0,93,4155	0/0:29,0:29:87.30:0,87,3948	1/1:0,16:16:42.14:1252,42,0	1/1:0,16:16:44.98:1333,45,0	0/0:16,0:16:48.16:0,48,1972	0/0:24,0:24:72.25:0,72,3311	0/0:24,0:24:72.25:0,72,3163	0/0:23,0:22:69.24:0,69,3155	0/0:20,0:20:60.21:0,60,2585	0/0:25,0:25:75.26:0,75,3152	0/0:27,0:27:81.26:0,81,3383	0/0:11,0:11:33.11:0,33,1528	1/1:0,21:21:48.16:1398,48,0	1/1:1,20:21:42.14:1239,42,0	1/1:0,15:15:14.58:451,15,0	0/0:27,0:27:81.27:0,81,3349	0/0:34,0:34:99:0,102,4518	0/0:30,0:30:90.31:0,90,4009	0/0:2,0:2:6.02:0,6,278
chr10	78559600	.	A	AGC	3844.17	PASS	AB=0.994;AC=30;AF=0.536;AN=56;BaseQRankSum=4.084;DP=612;FS=3.276;HRun=0;HaplotypeScore=133.4553;InbreedingCoeff=0.5276;MQ=69.04;MQ0=4;MQRankSum=-1.638;QD=9.47;ReadPosRankSum=-0.339;VQSLOD=3.1059;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:35.67:0,36,281	1/1:10,0:10:18.09:115,18,0	0/0:27,0:23:56.16:0,56,556	0/0:21,0:12:29.97:0,30,274	1/1:28,0:27:62.43:456,62,0	0/0:22,0:21:15.54:0,16,235	0/0:27,0:26:43.67:0,44,358	1/1:36,0:36:84.20:599,84,0	0/0:20,0:21:51.03:0,51,607	1/1:30,0:30:60.32:369,60,0	1/1:19,0:19:44.43:324,44,0	0/1:18,0:18:8.41:8,0,165	0/1:21,0:21:14.24:14,0,166	0/0:12,0:12:32.94:0,33,327	1/1:24,0:24:31.63:236,32,0	1/1:10,12:23:5.95:72,6,0	0/0:18,0:18:18.02:0,18,154	0/1:25,0:25:46.39:46,0,374	1/1:1,18:20:55.08:392,55,0	1/1:22,0:22:52.88:357,53,0	1/1:13,0:11:23.97:200,24,0	0/1:27,0:27:71.46:71,0,194	0/0:17,0:17:1.79:0,2,204	0/1:24,0:24:15.24:15,0,281	1/1:13,0:13:29.76:214,30,0	0/1:31,0:29:69.93:70,0,277	1/1:21,0:21:43.77:286,44,0	0/0:14,0:13:9.51:0,10,182
chr10	78560337	.	TG	T	1164.91	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=1.111;DP=503;FS=10.598;HRun=10;HaplotypeScore=92.9358;InbreedingCoeff=0.7497;MQ=74.82;MQ0=1;MQRankSum=-0.223;QD=14.75;ReadPosRankSum=2.852;VQSLOD=3.0967;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,27:33:74.97:651,75,0	0/0:7,0:7:11.73:0,12,73	0/0:22,0:20:25.97:0,26,275	0/0:22,1:21:19.11:0,19,224	0/0:7,0:14:11.73:0,12,71	1/1:1,12:14:32.99:286,33,0	1/1:2,15:17:24.47:367,24,0	0/0:8,0:8:5.94:0,6,41	0/0:13,0:13:33.04:0,33,339	0/0:8,0:13:11.76:0,12,73	0/1:9,0:15:1.50:2,0,6	0/0:25,0:26:57.11:0,57,603	0/0:20,0:20:36.08:0,36,389	0/0:24,1:25:40.08:0,40,643	0/0:12,0:19:2.69:0,3,15	0/0:8,0:13:6.93:0,7,31	0/0:34,0:34:54.57:0,55,780	0/0:25,2:27:46.13:0,46,728	0/0:6,0:12:26.43:0,26,163	0/0:1,0:8:14.51:0,15,84	0/0:11,0:12:13.37:0,13,89	0/0:22,0:22:45.10:0,45,482	0/0:12,0:12:20.92:0,21,210	0/0:29,2:31:43.57:0,44,686	0/0:7,0:7:8.81:0,9,54	0/0:20,0:20:26.97:0,27,274	0/0:16,0:29:11.87:0,12,59	0/0:6,0:6:14.99:0,15,145
chr10	78560689	.	A	AC	19885.63	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-13.675;DP=626;FS=7.553;HRun=1;HaplotypeScore=57.8174;InbreedingCoeff=0.9924;MQ=87.80;MQ0=0;MQRankSum=-5.177;QD=41.95;ReadPosRankSum=3.022;VQSLOD=5.2556;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:93.32:1394,93,0	1/1:0,4:4:12.04:180,12,0	0/0:29,0:29:51.86:0,52,771	0/0:15,0:15:38.95:0,39,456	1/1:1,19:20:51.17:764,51,0	1/1:0,16:16:48.16:719,48,0	1/1:1,32:33:93.32:1394,93,0	1/1:1,30:31:90.29:1324,90,0	0/0:30,0:30:90.28:0,90,1153	1/1:2,18:20:54.18:806,54,0	1/1:0,12:12:33.11:493,33,0	1/1:1,27:28:81.27:1214,81,0	1/1:2,23:26:72.24:1077,72,0	0/0:32,0:32:90.29:0,90,1168	1/1:0,26:26:75.25:1124,75,0	1/1:0,26:26:78.26:1169,78,0	0/0:27,0:27:81.26:0,81,1052	0/0:19,0:19:54.18:0,54,700	1/1:1,21:22:66.21:957,66,0	1/1:0,8:8:24.08:360,24,0	1/1:1,36:37:99:1482,99,0	1/1:1,14:15:41.99:629,42,0	1/1:1,8:9:24.08:360,24,0	1/1:0,39:39:99:1572,105,0	1/1:0,10:10:30.10:450,30,0	1/1:1,20:21:63.21:937,63,0	1/1:2,27:29:75.25:1123,75,0	1/1:0,8:8:24.08:359,24,0
chr10	78561112	.	AT	A	7291.67	PASS	AB=0.917;AC=36;AF=0.643;AN=56;BaseQRankSum=11.757;DP=584;FS=0.698;HRun=10;HaplotypeScore=71.1385;InbreedingCoeff=0.8544;MQ=75.48;MQ0=1;MQRankSum=-1.479;QD=18.46;ReadPosRankSum=0.742;VQSLOD=5.4484;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:34:86.98:755,87,0	1/1:1,11:12:29.99:260,30,0	0/0:11,0:11:9.67:0,10,126	0/1:14,0:14:4.85:5,0,124	1/1:2,23:25:62.92:540,63,0	1/1:2,22:24:65.98:573,66,0	1/1:2,30:32:80.98:703,81,0	1/1:2,14:16:41.99:365,42,0	0/0:19,0:19:54.15:0,54,597	1/1:6,14:20:41.98:365,42,0	1/1:4,15:20:43.95:371,44,0	0/0:21,0:21:54.14:0,54,591	0/1:16,4:20:39.07:39,0,284	0/0:23,0:23:60.10:0,60,642	1/1:1,16:17:44.99:391,45,0	1/1:2,22:24:59.98:521,60,0	0/0:20,1:22:27.94:0,28,519	0/0:20,0:20:60.12:0,60,643	1/1:4,12:16:35.99:312,36,0	1/1:1,23:24:35.68:523,36,0	1/1:2,15:17:44.99:391,45,0	0/0:22,0:22:54.95:0,55,577	0/0:29,0:29:78.19:0,78,844	0/0:22,0:22:57.14:0,57,622	1/1:0,20:20:56.99:495,57,0	1/1:0,1:25:52.45:174,52,0	1/1:5,21:26:26.81:462,27,0	1/1:0,0:8:16.30:48,16,0
chr10	78561945	.	AT	A	10397.06	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=18.508;DP=567;FS=2.201;HRun=4;HaplotypeScore=92.7688;InbreedingCoeff=0.9907;MQ=66.96;MQ0=0;MQRankSum=-0.619;QD=33.76;ReadPosRankSum=3.189;VQSLOD=5.2489;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.15:0,45,627	1/1:0,10:10:30.04:343,30,0	0/0:6,0:6:18.06:0,18,236	0/0:7,0:7:9.64:0,10,150	1/1:1,27:28:75.23:900,75,0	0/0:20,0:20:54.18:0,54,746	0/0:15,0:15:45.15:0,45,627	1/1:0,36:36:99:1269,108,0	0/0:16,0:16:48.15:0,48,653	1/1:0,27:27:78.24:936,78,0	1/1:0,35:35:99:1182,99,0	0/0:23,0:23:69.20:0,69,929	0/0:19,0:19:54.18:0,54,756	0/0:19,0:19:51.16:0,51,697	1/1:0,23:23:66.20:792,66,0	1/1:0,15:15:39.12:468,39,0	0/0:17,0:17:45.14:0,45,613	0/0:30,0:30:81.27:0,81,1134	1/1:0,17:17:51.13:589,51,0	1/1:0,37:37:99:1223,102,0	1/1:0,13:13:36.11:431,36,0	0/0:12,0:12:36.11:0,36,479	0/0:12,0:12:36.12:0,36,504	0/0:9,0:9:24.08:0,24,332	1/1:0,32:32:93.28:1114,93,0	0/0:30,1:31:54.27:0,54,1133	1/1:0,35:35:96.29:1151,96,0	0/0:7,0:7:21.07:0,21,294
chr10	78562318	.	C	CT	11208.52	PASS	AB=0.900;AC=25;AF=0.446;AN=56;BaseQRankSum=-6.386;DP=651;FS=14.908;HRun=2;HaplotypeScore=66.8887;InbreedingCoeff=0.9271;MQ=89.75;MQ0=0;MQRankSum=-2.446;QD=35.03;ReadPosRankSum=0.468;VQSLOD=3.5564;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:45.12:0,45,543	1/1:0,7:7:21.07:302,21,0	0/0:28,0:28:72.19:0,72,868	0/0:21,0:21:44.61:0,45,575	1/1:0,22:22:63.21:907,63,0	0/0:22,0:22:63.17:0,63,755	0/0:22,0:22:63.19:0,63,768	1/1:5,32:37:93.31:1339,93,0	0/0:30,0:30:87.23:0,87,1039	1/1:0,30:30:87.21:1158,87,0	1/1:0,24:24:63.21:906,63,0	0/0:31,0:31:87.27:0,87,1075	0/0:39,0:39:99:0,105,1288	0/0:23,0:23:66.16:0,66,788	1/1:3,30:32:72.24:1037,72,0	1/1:2,28:30:44.08:1086,44,0	0/0:17,0:17:51.16:0,51,632	0/0:16,0:16:39.12:0,39,482	1/1:1,26:27:78.26:1123,78,0	1/1:2,23:25:69.19:970,69,0	1/1:0,19:19:54.18:777,54,0	0/0:14,0:14:36.11:0,36,446	0/0:13,0:13:36.10:0,36,433	0/0:24,0:24:72.21:0,72,874	1/1:2,17:19:51.17:734,51,0	0/1:24,3:27:52.19:52,0,737	1/1:0,19:20:57.19:818,57,0	0/0:16,0:16:45.14:0,45,557
chr10	78563629	.	G	GA	11267.15	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=0.375;DP=594;FS=2.457;HRun=8;HaplotypeScore=81.8898;InbreedingCoeff=0.9811;MQ=72.21;MQ0=1;MQRankSum=-3.021;QD=23.82;ReadPosRankSum=-1.078;VQSLOD=5.0503;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:46:99:577,114,0	1/1:0,13:13:36.11:415,36,0	0/0:17,0:17:13.78:0,14,250	0/0:13,0:11:20.38:0,20,172	1/1:4,20:24:63.19:726,63,0	1/1:1,0:21:51.13:260,51,0	1/1:1,2:24:59.37:336,59,0	1/1:7,20:27:54.14:612,54,0	0/0:18,0:18:45.02:0,45,412	1/1:6,23:29:69.20:796,69,0	1/1:0,15:15:36.11:416,36,0	1/1:4,23:27:60.18:691,60,0	1/1:7,18:25:23.70:526,24,0	0/0:31,0:31:86.99:0,87,781	1/1:1,23:24:54.16:623,54,0	1/1:6,16:22:23.68:526,24,0	0/0:27,0:27:66.03:0,66,604	0/0:15,0:15:42.02:0,42,384	1/1:2,8:11:29.88:297,30,0	1/1:3,20:23:51.11:574,51,0	1/1:1,19:20:51.15:587,51,0	1/1:1,8:9:21.06:242,21,0	1/1:3,16:19:36.11:415,36,0	1/1:4,13:17:36.11:415,36,0	1/1:1,21:22:60.18:692,60,0	1/1:2,29:31:84.22:955,84,0	1/1:5,15:20:42.12:480,42,0	1/1:0,3:3:9.03:104,9,0
chr10	78563855	.	CTCTA	C	24003.52	PASS	AB=0.935;AC=41;AF=0.732;AN=56;BaseQRankSum=14.101;DP=720;FS=0.306;HRun=0;HaplotypeScore=136.5339;InbreedingCoeff=0.9075;MQ=91.55;MQ0=7;MQRankSum=-9.434;QD=44.62;ReadPosRankSum=3.970;VQSLOD=5.5290;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:35:80.93:1377,81,0	1/1:0,8:8:21.07:399,21,0	0/0:34,0:34:95.60:0,96,2184	0/0:30,0:30:84.29:0,84,2175	1/1:3,23:26:63.22:1196,63,0	1/1:2,15:16:33.11:626,33,0	1/1:2,41:43:99:2102,111,0	1/1:1,16:17:48.16:910,48,0	0/0:32,0:32:96.31:0,96,2475	1/1:2,26:28:78.27:1464,78,0	1/1:0,19:19:54.10:965,54,0	1/1:0,27:27:81.28:1537,81,0	1/1:1,25:26:63.22:1192,63,0	0/0:34,0:34:93.31:0,93,2454	1/1:0,30:29:75.26:1424,75,0	1/1:1,34:33:93.32:1762,93,0	0/0:24,0:24:72.25:0,72,1930	0/0:21,0:21:63.22:0,63,1701	1/1:1,10:11:30.10:556,30,0	1/1:0,28:27:75.26:1413,75,0	1/1:1,43:43:99:2043,108,0	1/1:1,20:20:51.17:968,51,0	1/1:1,19:19:45.05:796,45,0	1/1:1,27:27:51.17:968,51,0	1/1:0,23:23:63.22:1196,63,0	0/1:27,2:29:29.60:30,0,2022	1/1:1,22:23:57.20:1082,57,0	0/0:7,0:7:21.07:0,21,567
chr10	78564695	.	A	ACCCTCCATCCC	22294.05	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-9.835;DP=630;FS=2.589;HRun=0;HaplotypeScore=210.9667;InbreedingCoeff=0.9843;MQ=82.85;MQ0=0;MQRankSum=-13.777;QD=86.08;ReadPosRankSum=-1.997;VQSLOD=4.5784;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:93.32:0,93,3098	1/1:3,8:11:15.05:830,15,0	0/0:25,0:25:66.18:0,66,1664	0/0:22,0:22:41.28:0,41,1146	1/1:7,13:20:36.12:2010,36,0	0/0:19,0:19:57.20:0,57,1866	0/0:24,0:24:60.20:0,60,1955	1/1:14,22:39:84.24:3084,84,0	0/0:24,0:24:69.16:0,69,1787	1/1:11,15:31:66.21:3246,66,0	1/1:3,4:9:12.04:669,12,0	0/0:37,0:37:99:0,102,3335	0/0:19,0:19:48.16:0,48,1502	0/0:22,0:22:60.18:0,60,1953	1/1:7,20:30:57.20:3120,57,0	1/1:4,11:18:20.95:1175,21,0	0/0:21,0:21:57.14:0,57,1777	0/0:19,0:19:50.52:0,51,1459	1/1:7,5:12:24.08:1156,24,0	1/1:7,15:24:36.12:1941,36,0	1/1:7,7:15:9.03:503,9,0	0/0:20,0:20:39.11:0,39,1243	0/0:9,0:9:27.09:0,27,889	0/0:32,0:32:93.28:0,93,2846	1/1:5,12:17:36.12:2012,36,0	0/0:25,0:25:69.22:0,69,2155	1/1:11,20:33:48.16:2546,48,0	0/0:14,0:14:39.13:0,39,1281
chr10	78564885	.	G	GAA	8558.77	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-13.569;DP=625;FS=21.677;HRun=6;HaplotypeScore=70.9963;InbreedingCoeff=0.9987;MQ=81.25;MQ0=0;MQRankSum=0.646;QD=40.56;ReadPosRankSum=3.210;VQSLOD=3.3936;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:62.58:1023,63,0	0/0:9,0:9:21.06:0,21,256	0/0:24,0:24:45.12:0,45,541	0/0:10,0:10:24.06:0,24,283	0/0:27,0:26:78.22:0,78,935	1/1:3,21:24:57.20:964,57,0	1/1:1,22:24:60.21:1015,60,0	0/0:24,0:24:69.20:0,69,821	0/0:14,0:14:39.10:0,39,464	0/0:28,0:28:78.23:0,78,933	0/0:14,0:14:42.13:0,42,512	1/1:3,27:31:72.25:1218,72,0	1/1:2,36:38:99:1707,102,0	0/0:17,0:17:48.13:0,48,571	0/0:12,0:12:33.10:0,33,401	0/0:21,0:21:63.19:0,63,756	0/0:18,0:18:51.16:0,51,622	0/0:21,0:21:57.06:0,57,646	0/0:31,0:31:87.27:0,87,1060	0/0:29,0:29:81.20:0,81,958	0/0:34,0:34:99:0,99,1182	1/1:4,21:24:54.18:911,54,0	1/1:5,20:25:57.19:959,57,0	1/1:0,18:18:45.15:761,45,0	0/0:28,0:28:72.19:0,72,863	0/0:24,0:24:66.20:0,66,796	0/0:19,0:19:42.12:0,42,511	0/0:10,0:10:27.05:0,27,313
chr10	78565044	.	G	GT	19832.09	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-2.211;DP=709;FS=1.008;HRun=1;HaplotypeScore=90.8168;InbreedingCoeff=0.9992;MQ=84.79;MQ0=0;MQRankSum=-5.160;QD=38.81;ReadPosRankSum=3.000;VQSLOD=5.3816;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,48:50:99:1933,129,0	1/1:0,14:14:35.62:483,36,0	0/0:25,0:25:66.18:0,66,803	0/0:21,0:21:42.66:0,43,627	1/1:0,17:17:42.10:604,42,0	1/1:0,20:20:48.16:719,48,0	1/1:0,34:34:90.30:1342,90,0	1/1:2,31:33:90.22:1245,90,0	0/0:26,0:26:75.24:0,75,974	1/1:2,22:24:69.23:1026,69,0	1/1:0,13:13:36.12:538,36,0	1/1:2,37:39:99:1482,99,0	1/1:2,26:28:69.23:1033,69,0	0/0:28,0:28:72.18:0,72,911	1/1:1,15:16:45.15:673,45,0	1/1:0,24:24:63.21:943,63,0	0/0:44,0:44:99:0,132,1695	0/0:26,0:26:78.17:0,78,961	1/1:1,33:34:99:1437,99,0	1/1:0,18:18:51.17:757,51,0	1/1:2,50:52:99:2203,147,0	1/1:0,20:20:54.18:809,54,0	1/1:1,14:15:39.13:584,39,0	1/1:2,20:22:42.14:629,42,0	1/1:2,19:21:51.17:764,51,0	0/0:18,0:18:54.13:0,54,646	1/1:1,16:17:42.14:629,42,0	0/0:10,0:10:21.07:0,21,273
chr10	78565160	.	A	AAC	1442.31	PASS	AB=0.898;AC=15;AF=0.268;AN=56;BaseQRankSum=-1.495;DP=641;FS=6.385;HRun=0;HaplotypeScore=151.3515;InbreedingCoeff=0.3223;MQ=65.91;MQ0=5;MQRankSum=0.519;QD=5.53;ReadPosRankSum=-1.001;VQSLOD=2.8303;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,9:31:15.49:429,15,0	0/0:6,0:6:11.93:0,12,86	0/0:31,0:21:11.95:0,12,109	0/0:52,0:34:26.62:0,27,280	0/0:15,0:15:29.16:0,29,189	0/1:14,1:23:42.07:149,0,42	1/1:10,1:14:11.99:117,12,0	0/1:33,0:32:12.78:13,0,61	0/0:23,0:23:48.13:0,48,546	0/1:27,0:27:17.53:18,0,155	0/0:10,0:10:18.05:0,18,118	0/0:23,0:22:33.57:0,34,151	0/0:17,0:17:11.19:0,11,50	0/0:27,0:29:56.66:0,57,602	0/1:29,1:30:4.26:4,0,217	0/0:21,0:21:12.44:0,12,197	0/0:30,0:34:71.54:0,72,750	0/1:8,11:21:30.53:473,0,31	0/0:16,0:14:12.26:0,12,74	0/0:16,0:16:20.82:0,21,150	0/0:29,0:29:44.47:0,44,297	0/0:24,0:23:22.30:0,22,105	0/0:10,0:10:8.39:0,8,38	0/1:26,0:27:25.36:46,0,25	0/0:23,0:23:32.54:0,33,208	1/1:34,0:34:21.27:288,21,0	0/1:13,0:13:25.62:26,0,90	1/1:4,0:6:6.47:53,6,0
chr10	78565164	.	C	CACACACACACACAC	2535.50	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=-7.948;DP=680;FS=6.188;HRun=0;HaplotypeScore=296.2811;InbreedingCoeff=-0.0839;MQ=61.25;MQ0=8;MQRankSum=1.587;QD=6.25;ReadPosRankSum=-2.635;VQSLOD=1.4910;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:99:105,0,352	0/0:8,0:8:11.97:0,12,313	0/0:34,0:20:5.15:0,5,145	0/0:56,0:30:7.59:0,8,255	0/0:14,0:14:9.09:0,9,796	0/1:23,0:23:99:107,0,227	1/1:15,0:15:10.28:62,10,0	0/1:35,0:34:99:170,0,209	0/0:26,0:26:48.13:0,48,1603	0/1:34,0:34:99:134,0,858	0/1:14,0:14:3.46:3,0,479	0/0:23,0:22:36.12:0,36,1026	0/0:17,0:17:12.04:0,12,334	0/0:28,0:28:56.57:0,57,1318	0/1:30,0:30:0.85:1,0,801	0/1:22,0:22:29.88:30,0,698	0/0:35,0:35:72.10:0,72,2172	0/1:21,0:21:99:103,0,673	0/1:18,0:15:30.78:31,0,154	0/1:14,0:14:20.90:21,0,473	0/1:32,0:31:36.92:37,0,875	0/0:22,0:21:24.08:0,24,660	0/0:11,0:11:9.03:0,9,231	0/1:27,0:27:2.51:3,0,204	0/1:25,0:25:10.87:11,0,980	1/1:25,11:40:49.68:1520,50,0	0/1:14,0:14:58.87:59,0,363	1/1:8,0:6:8.99:306,9,0
chr10	78565176	.	CACACACACAT	C	1285.78	PASS	AB=0.996;AC=14;AF=0.250;AN=56;BaseQRankSum=4.345;DP=722;FS=7.401;HRun=0;HaplotypeScore=247.3149;InbreedingCoeff=0.2393;MQ=53.27;MQ0=11;MQRankSum=-4.130;QD=6.21;ReadPosRankSum=-2.730;VQSLOD=1.1197;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:46.20:0,46,1626	0/1:13,0:13:17.93:18,0,620	0/0:48,0:20:9.95:0,10,561	0/0:62,0:27:57.10:0,57,1183	0/1:16,0:16:23.77:24,0,1241	0/0:21,0:21:27.09:0,27,975	0/1:21,0:21:99:134,0,543	0/0:33,0:32:24.63:0,25,1346	0/0:31,0:31:74.94:0,75,2695	0/0:35,0:35:25.76:0,26,2278	0/0:14,0:14:12.15:0,12,1050	1/1:25,1:25:33.29:447,33,0	1/1:19,0:19:13.94:145,14,0	0/0:26,0:26:63.22:0,63,2324	0/0:27,0:27:33.09:0,33,1684	0/0:22,0:22:7.18:0,7,1638	0/0:37,0:37:87.28:0,87,3416	0/0:22,0:22:48.13:0,48,1719	0/1:18,0:15:20.94:21,0,715	0/1:13,0:13:12.90:13,0,1015	0/0:33,0:32:22.45:0,22,1882	1/1:20,2:21:25.15:400,25,0	0/1:14,0:14:7.20:93,0,7	0/1:26,1:27:99:147,0,121	0/0:24,0:24:27.07:0,27,1622	0/0:35,0:35:68.69:0,69,1995	0/1:18,0:18:17.46:17,0,1041	0/0:11,0:9:21.07:0,21,618
chr10	78565178	.	CACACACAT	C	2988.60	PASS	AB=0.968;AC=21;AF=0.375;AN=56;BaseQRankSum=-1.009;DP=714;FS=1.356;HRun=0;HaplotypeScore=216.7237;InbreedingCoeff=0.0010;MQ=53.19;MQ0=11;MQRankSum=-3.244;QD=7.70;ReadPosRankSum=-6.188;VQSLOD=0.7624;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:0.63:1,0,1129	0/1:13,0:13:40.99:41,0,445	0/0:43,0:17:9.94:0,10,524	0/0:60,0:26:59.13:0,59,1157	0/1:18,0:18:65.70:66,0,904	0/0:21,0:21:27.09:0,27,733	0/1:21,0:21:99:160,0,388	0/1:32,0:31:50.15:50,0,845	0/0:33,0:33:85.93:0,86,2437	0/1:35,0:35:55.95:56,0,1538	0/0:14,0:14:12.07:0,12,746	1/1:4,22:25:40.38:1019,40,0	1/1:1,17:18:14.92:378,15,0	0/0:26,0:26:66.21:0,66,2163	0/0:27,0:27:9.08:0,9,1233	0/1:22,0:22:15.69:16,0,1182	0/0:36,0:36:87.27:0,87,2947	0/0:23,0:23:48.97:0,49,1355	0/1:19,0:16:63.80:64,0,506	0/1:13,0:13:15.89:16,0,749	0/0:32,0:31:5.11:0,5,1391	1/1:5,16:20:24.76:609,25,0	1/1:3,10:13:11.93:260,12,0	0/1:8,19:27:69.59:254,0,70	0/1:26,0:26:60.73:61,0,1187	0/1:33,0:33:32.39:32,0,1469	0/1:18,0:18:85.32:85,0,693	0/0:11,0:9:21.07:0,21,488
chr10	78565184	.	CAT	C	4213.77	PASS	AB=0.953;AC=26;AF=0.464;AN=56;BaseQRankSum=0.322;DP=708;FS=1.064;HRun=0;HaplotypeScore=150.1841;InbreedingCoeff=-0.0260;MQ=54.29;MQ0=11;MQRankSum=-0.355;QD=9.20;ReadPosRankSum=-6.196;VQSLOD=3.4990;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:36.18:203,0,36	0/1:13,0:13:58.92:95,0,59	0/0:44,0:19:18.14:0,18,436	0/0:61,0:29:53.65:0,54,671	0/1:16,2:18:99:206,0,118	0/0:19,0:19:18.17:0,18,101	1/1:23,0:23:25.38:263,25,0	0/1:33,0:32:24.97:481,0,25	0/0:31,0:31:91.87:0,92,1238	0/1:31,3:34:86.95:572,0,87	0/1:13,2:15:60.31:191,0,60	1/1:25,0:24:41.37:266,41,0	1/1:18,0:18:14.77:94,15,0	0/0:25,0:25:47.78:0,48,933	0/1:25,2:27:99:218,0,191	0/1:20,2:22:99:179,0,178	0/0:34,0:34:51.10:0,51,1208	0/0:24,0:24:43.75:0,44,578	0/1:19,0:16:32.05:205,0,32	0/1:12,0:12:61.08:61,0,131	0/1:27,2:28:99:222,0,206	1/1:20,0:19:24.06:150,24,0	1/1:12,0:12:11.77:73,12,0	1/1:24,0:24:7.92:77,8,0	0/1:25,3:28:99:272,0,139	0/1:34,0:34:99:142,0,468	0/1:18,1:19:70.77:245,0,71	0/0:12,0:10:20.85:0,21,172
chr10	78565805	.	TAGA	T	10720.91	PASS	AB=0.920;AC=25;AF=0.446;AN=56;BaseQRankSum=-1.792;DP=644;FS=2.593;HRun=0;HaplotypeScore=116.2424;InbreedingCoeff=0.9079;MQ=87.08;MQ0=0;MQRankSum=-7.663;QD=38.99;ReadPosRankSum=-0.224;VQSLOD=5.9173;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:80.16:0,80,1405	1/1:1,10:11:24.08:409,24,0	0/0:22,0:22:66.19:0,66,1337	0/0:26,0:26:69.19:0,69,1342	1/1:0,20:20:42.14:683,42,0	0/0:22,0:22:32.23:0,32,730	0/0:20,0:20:7.33:0,7,656	1/1:1,20:21:59.23:972,59,0	0/0:25,0:25:75.25:0,75,1687	1/1:0,23:23:69.24:1175,69,0	1/1:2,14:16:33.11:562,33,0	0/0:33,0:33:93.27:0,93,1274	0/0:28,0:28:50.30:0,50,991	0/0:32,0:32:93.32:0,93,2142	1/1:1,33:34:84.29:1432,84,0	1/1:1,36:37:99:1688,99,0	0/0:33,0:33:93.32:0,93,2143	0/0:25,0:25:75.26:0,75,1704	1/1:3,9:12:24.04:353,24,0	1/1:0,11:11:30.10:483,30,0	1/1:0,23:23:54.65:873,55,0	0/0:19,0:19:32.18:0,32,673	0/0:19,0:19:51.17:0,51,691	0/0:24,0:24:69.23:0,69,932	1/1:0,16:16:42.14:674,42,0	0/1:21,2:23:36.11:36,0,1235	1/1:1,27:28:81.28:1381,81,0	0/0:4,0:4:9.03:0,9,207
chr10	78565971	.	TACACAC	T	1184.97	PASS	AB=0.765;AC=13;AF=0.241;AN=54;BaseQRankSum=4.231;DP=760;FS=9.092;HRun=0;HaplotypeScore=221.3211;InbreedingCoeff=0.4418;MQ=52.65;MQ0=26;MQRankSum=-3.109;QD=5.44;ReadPosRankSum=-0.537;VQSLOD=0.9580;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,1:31:4.30:49,4,0	0/0:3,0:15:29.72:0,30,231	0/0:39,0:16:3.01:0,3,31	./.	0/0:24,0:27:37.70:0,38,970	0/1:17,0:29:23.83:41,0,24	1/1:19,0:31:10.12:69,10,0	0/0:36,0:35:3.55:0,4,202	0/0:19,0:19:48.12:0,48,1090	0/0:27,0:28:10.99:0,11,688	0/0:20,0:21:12.05:0,12,540	1/1:14,10:24:29.84:459,30,0	1/1:13,4:17:29.77:398,30,0	0/0:25,0:25:36.05:0,36,856	0/0:32,0:33:69.10:0,69,1446	0/0:36,0:36:39.13:0,39,1478	0/0:16,0:20:37.94:0,38,854	0/0:16,0:25:26.83:0,27,528	0/1:10,0:9:3.49:3,0,216	0/0:27,0:27:45.15:0,45,1054	0/0:38,0:39:72.15:0,72,1715	0/1:15,5:20:8.01:206,0,8	0/1:11,15:26:21.72:69,0,22	0/1:16,14:30:10.76:54,0,11	0/0:21,0:23:33.54:0,34,694	0/0:23,0:23:47.81:0,48,749	0/0:18,0:19:44.90:0,45,763	0/0:20,0:21:59.98:0,60,1186
chr10	78566958	.	T	TAC	1692.02	PASS	AB=0.896;AC=31;AF=0.596;AN=52;BaseQRankSum=4.672;DP=626;FS=17.646;HRun=0;HaplotypeScore=164.8309;InbreedingCoeff=0.4107;MQ=55.49;MQ0=11;MQRankSum=-2.144;QD=4.02;ReadPosRankSum=-2.743;VQSLOD=1.5780;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:54,0:54:0:0,0,0	0/1:6,0:8:5.08:47,0,5	./.	./.	0/1:21,0:21:0:0,0,0	0/0:21,0:21:8.52:0,9,42	0/0:41,0:41:2.84:0,3,14	1/1:18,0:17:17.93:137,18,0	0/1:23,0:24:4.13:4,0,185	1/1:28,0:28:24.77:177,25,0	0/1:11,0:11:0.03:0,0,0	0/1:14,8:23:6.48:164,0,6	1/1:15,7:21:30.29:397,30,0	0/1:21,0:21:8.11:8,0,92	1/1:21,1:22:12.02:136,12,0	1/1:18,0:18:13.25:123,13,0	0/0:32,0:36:32.85:0,33,526	0/0:18,0:27:22.73:0,23,112	1/1:15,0:13:3.01:30,3,0	1/1:18,0:19:3.47:28,3,0	0/1:17,0:18:0.11:0,0,0	1/1:7,7:14:3.01:42,3,0	1/1:8,6:14:6.02:90,6,0	0/1:17,15:33:11.70:247,0,12	1/1:10,0:11:6.48:61,6,0	0/0:17,0:17:16.31:0,16,193	1/1:14,1:17:17.93:158,18,0	0/0:10,0:10:15.04:0,15,165
chr10	78566984	.	CACACACACACACAT	C	770.92	PASS	AB=0.962;AC=13;AF=0.232;AN=56;BaseQRankSum=6.268;DP=706;FS=30.235;HRun=0;HaplotypeScore=283.9428;InbreedingCoeff=0.0074;MQ=43.70;MQ0=24;MQRankSum=-5.639;QD=3.15;ReadPosRankSum=-6.840;VQSLOD=0.2549;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:15,36:51:2.72:0,3,173	0/0:9,0:9:0.95:0,1,544	0/0:35,0:4:9.02:0,9,206	0/0:47,0:12:28.91:0,29,993	0/1:21,0:21:0.01:0,0,0	1/1:5,10:15:11.99:406,12,0	0/1:20,22:42:27.43:174,0,27	0/1:25,0:23:99:131,0,1453	0/0:28,0:28:51.07:0,51,2500	0/1:28,0:27:30.72:31,0,2550	1/1:10,0:9:0.47:1,0,0	0/1:27,0:27:3.41:3,0,1587	0/1:23,0:22:13.43:13,0,2207	0/0:29,0:28:66.20:0,66,3136	0/0:22,0:21:17.65:0,18,841	0/0:20,0:17:17.93:0,18,1355	0/0:48,0:48:99:0,130,5821	0/0:26,0:26:71.95:0,72,2273	0/1:17,0:15:99:104,0,573	0/0:19,0:18:14.54:0,15,478	0/0:18,0:18:5.48:0,5,183	0/1:18,0:18:31.90:32,0,401	0/0:15,0:14:0.07:0,0,580	0/0:38,0:38:21.56:0,22,2004	0/0:20,0:18:9.50:0,10,388	0/0:27,0:27:81.19:0,81,2959	0/1:19,0:19:13.34:13,0,1441	0/0:9,0:9:21.07:0,21,1376
chr10	78567014	.	GCGCACACA	G	9477.13	PASS	AB=0.636;AC=23;AF=0.411;AN=56;BaseQRankSum=11.043;DP=599;FS=52.416;HRun=0;HaplotypeScore=220.2118;InbreedingCoeff=0.8912;MQ=57.42;MQ0=7;MQRankSum=-13.899;QD=51.51;ReadPosRankSum=0.706;VQSLOD=2.9594;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:8.82:0,9,393	1/1:4,4:8:15.05:415,15,0	0/0:25,0:13:23.28:0,23,875	0/0:33,0:18:48.16:0,48,1499	1/1:1,16:17:18.06:503,18,0	0/0:13,0:13:15.05:0,15,657	0/0:37,0:37:36.12:0,36,1408	1/1:5,14:19:42.09:1019,42,0	0/0:24,0:24:54.08:0,54,2255	1/1:4,15:19:45.15:1252,45,0	1/1:1,7:8:6.02:168,6,0	0/0:24,0:24:45.15:0,45,1803	0/0:23,0:23:53.77:0,54,2039	0/0:30,0:30:78.27:0,78,3277	1/1:2,15:17:42.14:1173,42,0	0/1:6,8:11:99:402,0,114	0/0:44,0:44:99:0,123,4922	0/0:26,0:26:72.25:0,72,2859	1/1:1,12:13:36.08:942,36,0	1/1:2,12:14:36.12:1005,36,0	1/1:3,12:15:12.10:337,12,0	0/0:16,0:16:31.89:0,32,1395	0/0:19,0:19:36.11:0,36,1461	0/0:30,0:30:57.18:0,57,2366	1/1:3,20:23:35.71:1005,36,0	0/0:23,0:23:69.24:0,69,2534	1/1:1,16:17:45.15:1258,45,0	0/0:7,0:7:18.03:0,18,406
chr10	78567136	.	CTT	C	298	PASS	AB=0.846;AC=3;AF=0.054;AN=56;BaseQRankSum=6.132;DP=593;FS=2.497;HRun=2;HaplotypeScore=99.5901;InbreedingCoeff=0.5965;MQ=57.01;MQ0=78;MQRankSum=6.104;QD=8.28;ReadPosRankSum=-1.661;VQSLOD=0.0051;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:32:75.26:0,75,1476	0/0:13,0:13:39.13:0,39,778	1/1:12,2:5:12.90:161,13,0	0/1:18,4:10:40.32:237,0,40	0/0:23,0:23:60.20:0,60,1085	0/0:13,0:11:27.05:0,27,478	0/0:21,0:17:48.09:0,48,878	0/0:7,0:3:9.03:0,9,178	0/0:21,0:17:26.96:0,27,517	0/0:29,0:29:78.26:0,78,1502	0/0:19,0:19:33.11:0,33,616	0/0:29,0:28:63.21:0,63,1258	0/0:21,0:18:35.99:0,36,668	0/0:22,0:18:42.13:0,42,811	0/0:19,0:17:45.15:0,45,871	0/0:29,0:26:53.88:0,54,976	0/0:32,0:28:51.15:0,51,974	0/0:24,0:17:27.09:0,27,539	0/0:14,0:10:27.09:0,27,540	0/0:19,0:19:54.17:0,54,1008	0/0:26,0:24:57.19:0,57,1104	0/0:23,0:23:50.96:0,51,910	0/0:22,0:21:53.83:0,54,1000	0/0:26,0:22:42.10:0,42,799	0/0:18,0:18:51.17:0,51,965	0/0:22,0:22:63.22:0,63,1253	0/0:16,0:12:27.09:0,27,535	0/0:9,0:9:27.09:0,27,530
chr10	78567342	.	CACCACCATCACT	C	7102.71	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.708;DP=604;FS=34.728;HRun=0;HaplotypeScore=183.4814;InbreedingCoeff=0.9706;MQ=50.63;MQ0=59;MQRankSum=-11.399;QD=39.68;ReadPosRankSum=2.067;VQSLOD=2.4304;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,24:32:24.08:824,24,0	0/0:14,0:13:30.10:0,30,1329	0/0:19,0:8:11.71:0,12,263	0/0:28,0:8:24.08:0,24,657	0/0:20,0:19:36.10:0,36,1394	1/1:4,16:20:24.08:874,24,0	1/1:4,15:19:15.05:495,15,0	0/0:19,0:16:39.06:0,39,1263	0/0:15,0:11:30.10:0,30,1714	0/0:21,0:21:60.21:0,60,2700	0/0:15,0:14:27.09:0,27,1364	1/1:2,13:15:18.06:656,18,0	1/1:5,16:21:30.06:1093,30,0	0/0:31,0:28:69.24:0,69,3978	0/0:23,0:21:51.17:0,51,2427	0/0:24,0:24:66.23:0,66,3234	0/0:34,0:31:75.26:0,75,4241	0/0:25,0:24:69.24:0,69,3455	0/0:11,0:8:24.08:0,24,1172	0/0:22,0:22:63.18:0,63,2549	0/0:33,0:28:69.03:0,69,3362	1/1:6,21:28:57.20:1896,57,0	1/1:2,19:21:33.58:1047,34,0	1/1:4,18:21:6.02:218,6,0	0/0:23,0:21:57.20:0,57,2573	0/0:21,0:20:60.15:0,60,2890	0/0:18,0:17:36.12:0,36,1786	0/0:8,0:8:24.08:0,24,1430
chr10	78567976	.	AAAAGAAAGAAAGAAAGAAAG	A	18795.79	PASS	AB=0.619;AC=42;AF=0.750;AN=56;BaseQRankSum=11.560;DP=496;FS=1.687;HRun=0;HaplotypeScore=288.4555;InbreedingCoeff=0.6698;MQ=67.71;MQ0=2;MQRankSum=-10.825;QD=49.46;ReadPosRankSum=1.971;VQSLOD=3.4575;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:29.51:506,30,0	1/1:1,0:6:15.05:699,15,0	0/0:23,0:17:8.99:0,9,104	0/0:11,0:9:3.01:0,3,32	1/1:17,0:25:31.02:1170,31,0	1/1:3,23:26:33.11:1764,33,0	1/1:4,7:11:6.02:317,6,0	1/1:22,0:22:21.05:247,21,0	0/0:21,0:21:48.16:0,48,3756	1/1:11,0:17:31.66:1011,32,0	1/1:12,0:18:36.11:1098,36,0	1/1:5,13:18:30.10:1604,30,0	1/1:8,17:25:18.06:964,18,0	0/0:13,0:13:30.09:0,30,2542	1/1:12,0:16:24.07:687,24,0	1/1:9,0:10:15.04:287,15,0	0/0:24,0:24:57.18:0,57,4052	0/0:24,0:24:54.19:0,54,3855	1/1:10,0:13:16.60:490,17,0	1/1:12,0:25:49.66:1960,50,0	1/1:4,0:5:1.60:137,2,0	1/1:7,19:26:36.12:1928,36,0	1/1:6,9:15:5.72:321,6,0	1/1:4,7:11:6.02:321,6,0	1/1:14,0:22:42.13:1316,42,0	0/1:7,0:22:25.85:616,0,26	1/1:12,0:19:42.13:1245,42,0	0/1:4,0:9:31.01:109,0,31
chr10	78568001	.	A	AC	1857.05	PASS	AB=0.799;AC=12;AF=0.214;AN=56;BaseQRankSum=-1.038;DP=457;FS=11.012;HRun=0;HaplotypeScore=199.6354;InbreedingCoeff=-0.0588;MQ=47.29;MQ0=2;MQRankSum=-1.564;QD=10.37;ReadPosRankSum=-6.479;VQSLOD=1.0255;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:40.05:0,40,458	0/0:6,0:6:13.14:0,13,43	0/0:15,0:9:18.40:0,18,178	0/0:6,0:3:8.98:0,9,80	0/1:11,5:16:47.97:68,0,48	0/0:29,0:28:43:0,43,303	0/0:8,0:8:6.63:0,7,53	1/1:11,6:17:5.76:337,6,0	0/0:26,0:26:78.26:0,78,1090	0/1:15,4:19:41.26:176,0,41	0/1:14,4:18:18.89:280,0,19	0/0:17,0:17:28.61:0,29,158	0/0:19,0:19:20.23:0,20,113	0/0:12,0:12:36.10:0,36,471	0/1:10,4:14:60.52:176,0,61	0/1:6,4:10:59.96:164,0,60	0/0:26,0:26:69.23:0,69,965	0/0:24,0:24:71.05:0,71,964	0/1:7,2:9:4.91:94,0,5	0/1:20,5:25:99:155,0,127	0/0:2,0:2:0.36:0,0,4	0/0:23,0:23:43.45:0,43,263	0/0:14,0:14:19.79:0,20,224	0/0:9,0:9:7.74:0,8,47	0/1:13,6:19:63.68:233,0,64	0/0:21,0:21:58.04:0,58,492	0/1:19,6:25:33.15:307,0,33	0/1:6,0:7:10.68:15,0,11
chr10	78568005	.	A	AC	124.59	PASS	AB=0.944;AC=5;AF=0.089;AN=56;BaseQRankSum=1.696;DP=477;FS=7.741;HRun=0;HaplotypeScore=193.5617;InbreedingCoeff=-0.1025;MQ=48.05;MQ0=1;MQRankSum=-1.953;QD=1.34;ReadPosRankSum=0.062;VQSLOD=1.8206;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,7:18:99:155,0,334	0/0:7,0:7:14.87:0,15,83	0/0:14,0:9:19.39:0,19,209	0/0:5,0:2:6:0,6,56	0/0:17,0:17:26.23:0,26,151	0/1:29,0:28:29.01:29,0,284	0/1:8,0:8:37.25:37,0,42	0/0:17,0:17:47.36:0,47,571	0/0:26,0:26:78.25:0,78,1073	0/0:21,0:21:58.32:0,58,556	0/0:19,0:19:30.61:0,31,323	0/1:18,0:18:5.45:5,0,244	0/1:20,0:20:4.67:5,0,130	0/0:12,0:12:36.12:0,36,503	0/0:14,0:14:34.63:0,35,314	0/0:11,0:11:27.94:0,28,298	0/0:25,0:25:69.17:0,69,909	0/0:26,0:26:75.90:0,76,942	0/0:11,0:11:30.93:0,31,326	0/0:27,0:27:66.58:0,67,512	0/0:2,0:2:5.38:0,5,50	0/0:25,0:25:14.34:0,14,293	0/0:18,0:18:32.05:0,32,359	0/0:10,0:10:7.99:0,8,59	0/0:19,0:19:48.79:0,49,338	0/0:22,0:22:46.64:0,47,359	0/0:28,0:28:71.80:0,72,619	0/0:8,0:8:14.22:0,14,138
chr10	78568045	.	AT	A	7285.78	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=11.536;DP=579;FS=10.505;HRun=7;HaplotypeScore=184.5610;InbreedingCoeff=0.9774;MQ=64.39;MQ0=0;MQRankSum=2.287;QD=25.04;ReadPosRankSum=-0.740;VQSLOD=2.4750;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.19:0,60,752	1/1:2,10:12:30.06:302,30,0	0/0:8,0:8:20.95:0,21,233	0/0:6,0:6:15.18:0,15,148	1/1:2,26:28:71.99:700,72,0	0/0:27,0:26:63.20:0,63,786	0/0:11,0:11:30.05:0,30,360	1/1:7,32:39:90.56:878,91,0	0/0:25,0:25:75.24:0,75,944	1/1:3,33:36:96.12:951,96,0	1/1:0,22:22:62.99:604,63,0	0/0:23,0:23:57.18:0,57,717	0/0:20,0:20:48.15:0,48,592	0/0:16,0:16:45.14:0,45,566	1/1:2,20:22:57.11:575,57,0	1/1:2,15:17:7.34:385,7,0	0/0:20,0:20:54.13:0,54,661	0/0:18,0:18:48.10:0,48,584	1/1:6,11:17:33.06:332,33,0	1/1:8,27:35:81.14:817,81,0	1/1:0,3:3:9.02:91,9,0	0/0:24,0:24:66.21:0,66,830	0/0:21,0:21:51.05:0,51,604	0/0:10,0:10:26.95:0,27,339	1/1:2,24:26:72.10:714,72,0	0/0:24,0:24:66.21:0,66,829	1/1:3,31:34:93.18:936,93,0	0/0:15,0:15:33.11:0,33,415
chr10	78568436	.	C	CACACACACACACACACACAG	23268.29	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=1.238;DP=864;FS=1.675;HRun=0;HaplotypeScore=365.7148;InbreedingCoeff=0.8338;MQ=58.74;MQ0=6;MQRankSum=-7.525;QD=37.90;ReadPosRankSum=-3.517;VQSLOD=1.9337;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:34:5.31:221,5,0	1/1:3,0:12:18.06:938,18,0	0/0:40,0:21:40.18:0,40,675	0/0:38,0:24:44.51:0,45,652	0/0:9,0:25:0.47:0,0,1	1/1:14,0:27:13.52:264,14,0	1/1:16,0:33:13.91:480,14,0	1/1:33,0:31:87.18:1743,87,0	0/0:41,0:41:99:0,114,5067	1/1:10,0:37:91.10:2627,91,0	1/1:6,0:21:11.73:484,12,0	1/1:18,0:49:14.81:1167,15,0	1/1:10,9:28:30.57:2126,31,0	0/0:28,0:28:78.22:0,78,3375	1/1:9,0:38:17.97:905,18,0	1/1:6,0:27:22.58:1160,23,0	0/0:54,0:54:99:0,148,6210	0/0:24,0:24:69.10:0,69,2467	1/1:13,0:39:99:3104,111,0	1/1:7,0:28:5.80:379,6,0	1/1:32,0:32:32.92:347,33,0	1/1:12,5:20:3.01:289,3,0	1/1:8,13:32:7.89:807,8,0	1/1:14,15:41:5.13:494,5,0	1/1:5,0:21:11.47:592,11,0	1/1:7,0:32:77.75:3595,78,0	1/1:9,0:19:17.70:824,18,0	1/1:6,0:6:17.81:722,18,0
chr10	78568589	.	G	GAC	30049.41	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-7.600;DP=763;FS=7.768;HRun=0;HaplotypeScore=92.1191;InbreedingCoeff=0.9994;MQ=80.75;MQ0=2;MQRankSum=-5.428;QD=52.53;ReadPosRankSum=4.452;VQSLOD=5.0820;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:36:87.30:1767,87,0	1/1:0,12:12:36.12:719,36,0	0/0:29,0:29:84.27:0,84,1296	0/0:21,0:21:54.17:0,54,855	1/1:1,28:29:78.27:1585,78,0	1/1:1,31:32:90.31:1800,90,0	1/1:1,27:29:69.24:1402,69,0	1/1:0,24:26:78.25:1511,78,0	0/0:31,0:31:90.29:0,90,1439	1/1:3,31:35:96.33:1900,96,0	1/1:0,21:23:57.20:1158,57,0	1/1:0,36:37:90.31:1821,90,0	1/1:1,27:28:69.24:1400,69,0	0/0:23,0:23:69.23:0,69,1104	1/1:0,35:35:93.32:1889,93,0	1/1:2,34:36:99:2010,99,0	0/0:26,0:26:75.26:0,75,1219	0/0:24,0:24:72.25:0,72,1165	1/1:2,14:16:48.12:851,48,0	1/1:1,32:33:93.32:1888,93,0	1/1:1,25:27:63.22:1280,63,0	1/1:1,24:27:66.23:1340,66,0	1/1:1,21:21:57.19:1158,57,0	1/1:1,26:28:69.24:1402,69,0	1/1:1,31:32:87.30:1768,87,0	0/0:27,1:28:23.44:0,23,1248	1/1:2,26:27:69.24:1402,69,0	0/0:9,0:9:27.09:0,27,440
chr10	78571501	.	AT	A	2950.01	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.628;DP=608;FS=3.141;HRun=4;HaplotypeScore=106.3940;InbreedingCoeff=0.9939;MQ=74.68;MQ0=0;MQRankSum=-2.052;QD=30.41;ReadPosRankSum=2.027;VQSLOD=3.4374;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:30.10:0,30,420	0/0:17,0:17:48.14:0,48,640	0/0:15,0:14:32.83:0,33,405	0/0:14,0:14:29.74:0,30,338	0/0:35,0:35:99:0,105,1469	0/0:31,0:31:93.28:0,93,1267	0/0:16,0:16:48.16:0,48,672	0/0:35,0:35:93.28:0,93,1233	0/0:17,0:17:48.15:0,48,654	0/0:34,0:34:99:0,102,1428	0/0:33,0:33:93.29:0,93,1272	1/1:1,20:21:48.15:574,48,0	1/1:0,16:16:45.14:540,45,0	0/0:20,0:20:60.19:0,60,823	0/0:32,0:32:90.29:0,90,1242	0/0:18,0:18:54.18:0,54,756	0/0:14,0:14:42.13:0,42,567	0/0:8,0:8:15.05:0,15,210	0/0:25,0:25:66.21:0,66,905	0/0:43,0:43:99:0,120,1649	0/0:10,0:10:30.09:0,30,403	1/1:0,24:24:69.21:828,69,0	1/1:1,29:30:80.86:968,81,0	1/1:0,6:6:18.06:216,18,0	0/0:18,0:18:51.15:0,51,682	0/0:23,0:23:66.22:0,66,924	0/0:31,0:31:93.29:0,93,1270	0/0:11,0:11:33.07:0,33,412
chr10	78571602	.	A	AT	20766.69	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=1.291;DP=563;FS=0.449;HRun=0;HaplotypeScore=66.2692;InbreedingCoeff=0.9985;MQ=78.08;MQ0=0;MQRankSum=-3.767;QD=43.08;ReadPosRankSum=2.418;VQSLOD=5.3997;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:24.08:332,24,0	1/1:0,9:9:27.09:422,27,0	0/0:13,0:13:30.10:0,30,410	0/0:12,0:12:34.93:0,35,466	1/1:0,20:20:57.19:882,57,0	1/1:0,22:22:60.20:835,60,0	1/1:0,15:15:36.12:496,36,0	1/1:0,35:35:99:1575,105,0	0/0:16,0:16:48.15:0,48,654	1/1:0,28:28:84.23:1246,84,0	1/1:2,32:34:93.23:1413,93,0	1/1:0,15:15:42.14:653,42,0	1/1:2,21:23:57.19:888,57,0	0/0:18,0:18:54.17:0,54,739	1/1:0,15:15:36.12:563,36,0	1/1:0,22:22:63.21:985,63,0	0/0:14,0:14:39.10:0,39,524	0/0:8,0:8:24.06:0,24,317	1/1:0,17:17:51.13:751,51,0	1/1:1,39:40:99:1674,111,0	1/1:0,16:16:45.15:704,45,0	1/1:0,23:24:69.23:1068,69,0	1/1:0,27:27:78.27:1219,78,0	1/1:0,9:9:27.09:421,27,0	1/1:0,23:23:69.23:1079,69,0	1/1:0,28:28:84.29:1310,84,0	1/1:1,37:38:99:1642,105,0	1/1:0,14:14:39.13:610,39,0
chr10	78571763	.	T	TTTTGTTTTAC	10743.33	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=-14.530;DP=676;FS=1.075;HRun=0;HaplotypeScore=246.3104;InbreedingCoeff=-0.0332;MQ=76.27;MQ0=0;MQRankSum=-1.935;QD=22.86;ReadPosRankSum=-6.940;VQSLOD=2.1136;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:39.18:0,39,940	0/1:13,0:13:99:211,0,262	0/0:32,0:29:81.26:0,81,1725	0/0:33,0:29:50.27:0,50,1262	0/1:32,0:32:99:197,0,957	0/0:27,0:27:69.19:0,69,1837	0/0:25,0:25:53.53:0,54,1570	0/1:32,0:32:99:832,0,405	0/0:16,0:16:48.16:0,48,1395	0/1:33,0:33:99:292,0,834	0/1:28,0:28:29.69:30,0,862	1/1:0,18:24:23.66:1314,24,0	1/1:0,21:28:44.88:2449,45,0	0/0:19,0:19:57.20:0,57,1814	0/1:24,0:24:99:397,0,472	0/1:29,0:29:99:190,0,794	0/0:17,0:17:51.17:0,51,1224	0/0:15,0:15:45.15:0,45,1198	0/1:19,0:19:99:275,0,342	0/1:26,0:26:99:245,0,635	0/1:17,0:17:51.12:51,0,550	1/1:0,24:32:63.20:1885,63,0	1/1:0,14:16:14.66:691,15,0	1/1:0,7:8:9.03:493,9,0	0/1:26,0:26:99:182,0,673	0/1:26,0:26:99:386,0,531	0/1:48,0:48:99:558,0,1181	0/1:9,0:9:65.48:65,0,282
chr10	78572249	.	GTAATAATAA	G	1597.34	PASS	AB=0.952;AC=23;AF=0.605;AN=38;BaseQRankSum=0.651;DP=216;FS=2.434;HRun=0;HaplotypeScore=72.2246;InbreedingCoeff=0.4726;MQ=57.04;MQ0=2;MQRankSum=-4.049;QD=12.38;ReadPosRankSum=-0.282;VQSLOD=1.8299;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:12:15.05:0,15,353	./.	./.	./.	1/1:4,2:6:6.02:164,6,0	0/0:1,0:5:9.03:0,9,144	0/0:8,0:9:3.01:0,3,44	1/1:27,0:26:9.01:95,9,0	0/0:5,0:6:3.01:0,3,58	./.	1/1:5,4:9:12.04:326,12,0	./.	./.	0/0:8,0:8:6.02:0,6,230	1/1:4,1:5:3.01:82,3,0	1/1:2,3:5:2.76:82,3,0	0/0:16,0:16:33.11:0,33,1308	0/1:19,1:19:99:170,0,125	1/1:4,2:6:3.01:82,3,0	1/1:6,2:8:3.01:82,3,0	./.	./.	./.	0/0:5,0:5:3.01:0,3,80	1/1:5,4:9:6.02:164,6,0	1/1:4,2:6:6.02:164,6,0	1/1:14,3:17:9.03:245,9,0	1/1:4,7:11:3.01:82,3,0
chr10	78572657	.	T	TC	12694.99	PASS	AB=0.913;AC=35;AF=0.625;AN=56;BaseQRankSum=10.228;DP=554;FS=7.065;HRun=1;HaplotypeScore=81.5399;InbreedingCoeff=0.9089;MQ=91.18;MQ0=0;MQRankSum=-1.850;QD=36.58;ReadPosRankSum=2.773;VQSLOD=5.2790;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.21:0,69,881	1/1:1,9:10:27.09:404,27,0	0/0:27,0:27:65.88:0,66,893	0/0:18,0:18:48.37:0,48,544	1/1:3,16:19:51.09:736,51,0	0/0:14,0:14:39.13:0,39,506	0/0:28,0:28:81.26:0,81,1051	1/1:3,20:23:57.15:828,57,0	0/0:21,0:21:60.19:0,60,766	1/1:2,17:19:51.17:764,51,0	1/1:0,19:19:42.14:629,42,0	1/1:1,23:24:63.21:942,63,0	1/1:2,15:17:6.21:590,6,0	0/0:19,0:19:54.16:0,54,687	1/1:1,15:16:45.15:674,45,0	1/1:0,25:25:66.22:988,66,0	0/0:26,0:26:78.24:0,78,998	0/1:19,2:21:30.71:31,0,620	1/1:1,14:15:42.14:629,42,0	1/1:1,12:13:30.10:450,30,0	1/1:1,19:20:57.19:854,57,0	1/1:2,16:18:39.13:584,39,0	1/1:1,10:11:24.08:358,24,0	1/1:0,36:36:99:1573,105,0	1/1:0,12:12:36.12:538,36,0	0/0:15,0:15:39.13:0,39,506	1/1:2,27:29:75.25:1123,75,0	0/0:12,0:12:33.11:0,33,428
chr10	78574680	.	CTCCT	C	997.13	PASS	AB=0.816;AC=11;AF=0.196;AN=56;BaseQRankSum=9.208;DP=517;FS=3.825;HRun=0;HaplotypeScore=195.3554;InbreedingCoeff=-0.2321;MQ=79.68;MQ0=3;MQRankSum=-5.991;QD=6.88;ReadPosRankSum=2.442;VQSLOD=2.5471;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:99:0,102,2560	0/1:2,1:3:23.55:24,0,67	0/0:39,0:34:83.40:0,83,1637	0/0:41,0:30:59.04:0,59,1540	0/1:8,4:12:48.36:119,0,48	0/0:19,0:19:57.20:0,57,1436	0/0:21,0:21:57.19:0,57,1401	0/0:25,0:25:28.64:0,29,400	0/0:27,0:27:78.25:0,78,1988	0/1:15,1:16:1.73:2,0,526	0/1:16,2:18:50.01:50,0,173	0/0:10,0:10:30.10:0,30,809	0/0:24,0:24:72.23:0,72,1839	0/0:23,0:23:57.20:0,57,1512	0/1:15,8:23:99:296,0,287	0/1:10,5:15:99:186,0,201	0/0:18,0:18:51.18:0,51,1336	0/0:11,0:11:29.95:0,30,632	0/1:11,1:12:29.60:30,0,159	0/1:12,4:16:99:130,0,100	0/1:6,0:6:13.02:13,0,62	0/0:17,0:17:45.15:0,45,1174	0/0:16,0:16:42.14:0,42,1068	0/0:16,0:16:48.16:0,48,1232	0/1:3,5:8:55.96:175,0,56	0/0:20,0:20:57.20:0,57,1486	0/1:12,4:16:99:118,0,267	0/0:11,0:11:33.11:0,33,860
chr10	78574689	.	TGCCTTCCTCCTTCCCTTCCCCCTC	T	7491.48	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=11.793;DP=498;FS=8.903;HRun=0;HaplotypeScore=358.6356;InbreedingCoeff=0.9094;MQ=69.85;MQ0=4;MQRankSum=-11.493;QD=55.49;ReadPosRankSum=1.805;VQSLOD=2.0245;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,8990	1/1:2,1:3:5.81:186,6,0	0/0:46,0:35:74.67:0,75,4410	0/0:38,0:27:60.71:0,61,3145	1/1:7,4:11:14.49:668,14,0	0/0:19,0:19:57.20:0,57,4417	0/0:22,0:22:66.20:0,66,4911	1/1:16,0:16:5.95:96,6,0	0/0:26,0:26:78.27:0,78,6346	1/1:13,1:14:37.66:417,38,0	1/1:13,2:15:21.60:482,22,0	0/0:12,0:12:36.12:0,36,1866	0/0:23,0:23:69.22:0,69,4111	0/0:22,0:22:66.23:0,66,6592	1/1:14,8:22:46.30:1756,46,0	1/1:7,5:12:24.17:976,24,0	0/0:20,0:20:60.21:0,60,5076	0/0:11,0:11:33.11:0,33,2904	1/1:7,1:8:17.44:291,17,0	1/1:8,4:12:21.61:812,22,0	0/0:5,0:5:1.99:0,2,14	0/0:15,0:15:42.13:0,42,2419	0/0:14,0:14:39.12:0,39,2084	0/0:17,0:17:48.16:0,48,2498	1/1:2,5:7:2.86:911,3,0	0/0:20,0:20:60.21:0,60,5687	1/1:11,4:15:26.75:898,27,0	0/0:10,0:10:30.10:0,30,1706
chr10	78574701	.	TC	T	852.21	PASS	AB=0.794;AC=15;AF=0.268;AN=56;BaseQRankSum=10.404;DP=522;FS=8.856;HRun=3;HaplotypeScore=169.6457;InbreedingCoeff=0.2942;MQ=62.22;MQ0=7;MQRankSum=-10.436;QD=5.64;ReadPosRankSum=1.632;VQSLOD=-0.1039;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:99:0,125,1703	0/1:3,3:6:8.72:50,0,9	0/0:55,0:35:91.28:0,91,1192	0/0:55,0:30:29.26:0,29,675	0/1:10,6:16:0.83:108,0,1	0/0:20,0:20:57.19:0,57,819	0/0:23,0:23:69.20:0,69,955	0/1:5,2:7:55.16:55,0,62	0/0:26,1:27:41.43:0,41,966	0/1:11,3:14:54.21:54,0,264	0/1:12,4:16:0.68:79,0,1	0/0:13,0:13:36.12:0,36,504	0/0:18,0:18:54.16:0,54,742	0/0:21,0:21:63.21:0,63,907	0/1:17,1:18:49.10:49,0,113	0/1:12,4:16:42.29:121,0,42	0/0:20,0:20:60.16:0,60,839	0/0:10,0:10:30.10:0,30,431	0/1:4,1:5:29.22:29,0,63	1/1:11,4:15:20.69:102,21,0	1/1:4,5:9:11.99:117,12,0	0/0:12,0:12:36.03:0,36,468	0/0:14,0:14:36.42:0,36,453	0/0:14,0:14:34.34:0,34,453	1/1:8,4:12:23.01:127,23,0	0/0:20,0:20:60.20:0,60,864	0/1:12,5:17:91.57:133,0,92	0/0:6,0:6:18.06:0,18,257
chr10	78574708	.	C	CCT	2899.55	PASS	AB=0.718;AC=13;AF=0.232;AN=56;BaseQRankSum=5.550;DP=473;FS=1.019;HRun=0;HaplotypeScore=146.4563;InbreedingCoeff=0.7170;MQ=64.98;MQ0=7;MQRankSum=-0.951;QD=30.85;ReadPosRankSum=-1.204;VQSLOD=5.0543;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:99:0,123,1856	0/0:1,0:4:11.36:0,11,56	0/0:56,0:36:86.14:0,86,1248	0/0:55,0:29:42.58:0,43,744	0/0:7,0:13:27.50:0,28,156	0/0:19,0:19:57.19:0,57,871	0/0:22,0:22:66.20:0,66,969	0/1:2,0:6:5.97:6,0,15	0/0:25,0:25:69.23:0,69,1053	0/1:3,0:7:7.44:7,0,30	0/0:3,0:7:11.90:0,12,89	1/1:3,10:13:36.11:584,36,0	1/1:2,15:17:51.17:879,51,0	0/0:22,0:22:66.22:0,66,991	0/1:10,0:11:0.45:0,0,102	0/0:7,0:11:9.59:0,10,94	0/0:21,0:21:63.19:0,63,923	0/0:11,0:11:30.10:0,30,459	0/0:1,0:2:5.02:0,5,19	0/0:5,0:11:14.25:0,14,109	0/0:1,0:6:10.81:0,11,48	1/1:2,10:12:33.11:560,33,0	1/1:2,11:14:36.12:593,36,0	1/1:3,11:14:27.08:445,27,0	0/0:7,0:11:25.29:0,25,123	0/0:21,0:21:60.20:0,60,896	0/0:6,0:14:14.19:0,14,152	0/0:5,0:5:15.02:0,15,186
chr10	78574712	.	TC	T	4181.83	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=15.630;DP=479;FS=0.000;HRun=5;HaplotypeScore=134.9554;InbreedingCoeff=0.9645;MQ=66.88;MQ0=7;MQRankSum=-10.087;QD=22.60;ReadPosRankSum=1.716;VQSLOD=1.8700;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:99:0,117,1618	1/1:1,3:4:10.75:79,11,0	0/0:57,0:37:57.46:0,57,1053	0/0:52,0:27:38.01:0,38,641	1/1:8,6:14:29.36:221,29,0	0/0:20,0:20:57.18:0,57,781	0/0:22,0:22:66.21:0,66,906	1/1:0,10:10:29.81:286,30,0	0/0:23,0:23:69.23:0,69,960	1/1:1,6:7:20.93:187,21,0	1/1:3,4:7:20.71:160,21,0	1/1:1,13:14:35.88:333,36,0	1/1:4,14:18:52.85:493,53,0	0/0:21,0:21:63.20:0,63,865	1/1:12,1:13:35.87:291,36,0	1/1:5,7:12:29.93:257,30,0	0/0:22,0:22:64.10:0,64,882	0/0:12,0:12:36.12:0,36,499	1/1:1,1:2:6:58,6,0	1/1:4,8:12:29.65:217,30,0	1/1:1,5:6:11.99:109,12,0	1/1:1,11:12:32.61:289,33,0	1/1:2,12:14:36.01:352,36,0	1/1:0,13:13:26.99:285,27,0	1/1:5,7:12:29.88:242,30,0	0/0:21,1:22:28.69:0,29,797	1/1:4,11:15:40.66:324,41,0	0/0:3,0:3:9.03:0,9,126
chr10	78575100	.	TTCCTCCTCC	T	3577.06	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=6.190;DP=525;FS=20.553;HRun=0;HaplotypeScore=176.0206;InbreedingCoeff=0.6410;MQ=68.19;MQ0=7;MQRankSum=-6.503;QD=11.07;ReadPosRankSum=-0.655;VQSLOD=1.3934;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,20:34:12.03:307,12,0	0/0:8,0:8:7.99:0,8,44	0/0:25,0:17:3.01:0,3,34	0/0:20,0:13:6:0,6,66	1/1:26,0:26:3:26,3,0	1/1:5,9:14:12.04:325,12,0	1/1:10,17:27:27.09:650,27,0	0/0:23,0:23:6.01:0,6,59	0/0:15,0:16:39.13:0,39,1478	0/0:15,0:14:23.80:0,24,213	1/1:11,0:11:14.50:81,14,0	0/1:17,0:17:18.10:19,0,18	1/1:14,0:14:3.80:104,4,0	0/0:10,0:10:21.07:0,21,843	1/1:29,0:29:18.06:351,18,0	1/1:17,0:17:3.01:63,3,0	0/0:22,0:22:42.03:0,42,1341	0/0:21,0:21:57.11:0,57,1977	0/0:11,0:10:3:0,3,28	1/1:20,0:20:12:108,12,0	1/1:17,0:17:15.37:82,15,0	1/1:16,0:16:3.01:34,3,0	1/1:21,0:21:5.82:72,6,0	0/0:29,0:29:2.90:0,3,16	1/1:8,0:8:6.02:125,6,0	1/1:8,14:22:14.79:945,15,0	1/1:23,0:23:6.02:125,6,0	1/1:1,4:5:6.02:161,6,0
chr10	78575103	.	CTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCCTCTTCCTCCTCT	C	10728.38	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=5.676;DP=512;FS=7.319;HRun=0;HaplotypeScore=401.8027;InbreedingCoeff=0.6871;MQ=63.08;MQ0=10;MQRankSum=-7.097;QD=31.55;ReadPosRankSum=3.995;VQSLOD=1.9661;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:24.01:0,24,1287	1/1:8,0:8:9.03:319,9,0	0/1:22,0:13:2.84:3,0,289	0/0:19,0:11:9.91:0,10,309	1/1:10,16:26:3.01:300,3,0	0/0:14,0:14:12.04:0,12,1043	0/0:27,0:27:33.07:0,33,1974	1/1:23,0:23:9.02:272,9,0	0/0:16,0:16:45.15:0,45,5983	1/1:16,0:14:24.08:965,24,0	1/1:10,0:10:15.05:593,15,0	1/1:16,0:16:15.05:522,15,0	1/1:12,0:12:15.05:796,15,0	0/0:12,0:11:27.09:0,27,3994	1/1:3,25:28:18.06:2001,18,0	1/1:3,13:16:3.01:338,3,0	0/0:24,0:24:51.17:0,51,5639	0/0:21,0:21:60.21:0,60,8148	1/1:11,0:9:6.01:153,6,0	1/1:3,16:19:12.04:1208,12,0	1/1:16,0:16:18.06:696,18,0	1/1:6,10:16:9.03:388,9,0	1/1:2,20:22:6.33:622,6,0	1/1:3,25:28:6.02:130,6,0	1/1:1,6:7:6.02:675,6,0	0/1:21,0:21:73.59:74,0,3412	1/1:8,15:23:6.02:675,6,0	0/0:5,0:5:6.02:0,6,587
chr10	78575145	.	CTCT	C	979.24	PASS	AB=1.000;AC=31;AF=0.596;AN=52;BaseQRankSum=6.814;DP=476;FS=1.748;HRun=0;HaplotypeScore=105.5289;InbreedingCoeff=0.7562;MQ=47.98;MQ0=23;MQRankSum=-5.950;QD=5.00;ReadPosRankSum=-1.062;VQSLOD=2.3420;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:72.05:0,72,1207	1/1:4,0:3:8.88:58,9,0	0/0:25,0:8:10.32:0,10,308	0/0:24,0:14:26.95:0,27,620	1/1:16,0:16:2.90:16,3,0	0/0:13,0:13:21.37:0,21,461	0/0:28,0:27:47.64:0,48,745	1/1:1,7:7:20.83:148,21,0	0/0:18,0:18:54.15:0,54,1091	1/1:1,14:14:11.83:77,12,0	./.	1/1:5,0:5:14.85:107,15,0	1/1:12,0:12:29.65:204,30,0	0/0:19,0:17:50.91:0,51,1018	1/1:25,0:25:12.96:104,13,0	1/1:14,0:13:2.98:22,3,0	0/0:22,0:22:31.20:0,31,1043	0/0:31,0:29:81.10:0,81,1470	1/1:1,8:8:23.80:169,24,0	1/1:17,0:16:11.61:63,12,0	1/1:13,0:11:14.80:99,15,0	1/1:12,0:10:2.37:8,2,0	1/1:20,0:20:0.17:4,0,0	./.	1/1:6,0:6:5.95:42,6,0	0/0:30,0:29:61.27:0,61,1290	1/1:15,0:15:5.96:43,6,0	0/1:5,0:4:8.01:8,0,69
chr10	78576014	.	GAC	G	1013.93	PASS	AB=1.000;AC=22;AF=0.440;AN=50;BaseQRankSum=4.156;DP=409;FS=5.390;HRun=0;HaplotypeScore=77.8170;InbreedingCoeff=0.5109;MQ=73.60;MQ0=21;MQRankSum=-2.059;QD=5.36;ReadPosRankSum=-0.107;VQSLOD=2.3434;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:18:15:167,15,0	0/1:8,0:7:3.60:8,0,4	0/0:48,0:25:29.96:0,30,323	0/0:42,0:29:44.21:0,44,442	./.	1/1:4,17:21:23.96:280,24,0	1/1:6,16:22:26.76:334,27,0	0/1:23,0:22:6.12:6,0,66	0/0:17,0:16:30.10:0,30,455	1/1:5,0:5:8.52:41,9,0	0/0:7,0:5:1.55:0,2,4	1/1:13,1:13:3.75:51,4,0	1/1:4,1:5:5.97:46,6,0	0/0:16,0:16:36.11:0,36,501	0/0:5,0:4:2.22:0,2,7	0/0:9,0:8:2.80:0,3,13	0/1:19,0:18:2.59:3,0,432	0/0:17,0:17:38.20:0,38,576	0/1:18,0:17:16.67:17,0,30	./.	0/0:3,0:2:1.55:0,2,4	1/1:9,2:8:8.74:76,9,0	0/0:5,1:5:0:0,0,0	1/1:10,6:15:14.95:139,15,0	./.	0/0:17,0:17:21.42:0,21,447	1/1:8,0:7:2.68:11,3,0	0/0:2,0:2:5.34:0,5,27
chr10	78576517	.	ACAC	A	374.12	PASS	AB=0.955;AC=20;AF=0.385;AN=52;BaseQRankSum=1.903;DP=381;FS=4.947;HRun=0;HaplotypeScore=46.8923;InbreedingCoeff=0.0604;MQ=27.60;MQ0=48;MQRankSum=-1.131;QD=1.56;ReadPosRankSum=0.595;VQSLOD=1.0269;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:6:0.03:0,0,0	./.	0/0:14,0:1:3.01:0,3,40	0/0:20,0:2:3.01:0,3,40	./.	0/1:12,0:11:0.01:0,0,0	0/1:11,0:9:0.02:68,0,0	0/1:17,2:12:99:140,0,193	1/1:21,0:17:4.35:15,4,0	0/1:18,0:15:99:118,0,211	0/0:6,2:6:0.47:0,0,1	0/1:7,0:7:0.01:0,0,0	0/1:16,0:14:31.32:31,0,35	0/0:12,0:12:16.63:0,17,280	0/1:8,2:10:0.01:0,0,0	0/0:4,7:11:2.99:0,3,33	0/0:13,0:13:22.81:0,23,374	0/1:10,0:8:12.17:12,0,159	0/0:13,0:10:14.94:0,15,137	0/1:14,0:8:0.17:0,0,0	1/1:20,0:15:2.90:16,3,0	0/1:20,0:17:0.01:0,0,0	0/0:9,0:8:2.97:0,3,20	1/1:19,0:15:0.41:2,0,0	0/0:3,6:9:0:0,0,1	0/1:25,0:19:39.76:40,0,161	0/1:3,4:7:43.22:43,0,56	0/1:4,0:4:0.91:4,0,1
chr10	78576520	.	CCACA	C	79.69	PASS	AB=0.970;AC=5;AF=0.125;AN=40;BaseQRankSum=-0.402;DP=385;FS=0.000;HRun=0;HaplotypeScore=51.5995;InbreedingCoeff=0.2562;MQ=27.83;MQ0=50;MQRankSum=-1.494;QD=1.73;ReadPosRankSum=1.207;VQSLOD=0.7928;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:6:0:0,0,0	./.	./.	./.	./.	0/0:11,0:10:0:0,0,0	0/1:9,0:8:2.85:3,0,17	0/0:19,0:12:11.22:0,11,71	1/1:12,7:15:9.03:143,9,0	0/0:18,0:15:14.01:0,14,81	0/0:8,0:6:0:0,0,1	./.	0/0:14,0:14:6.47:0,6,106	0/0:12,0:12:14.99:0,15,305	./.	0/0:11,0:11:3.01:0,3,59	0/0:14,0:14:20.19:0,20,322	0/1:9,1:8:25.20:25,0,30	0/0:14,0:11:2.98:0,3,21	./.	0/0:18,0:12:2.98:0,3,21	0/0:23,0:19:3.01:0,3,39	0/0:10,0:9:6.02:0,6,94	0/0:18,0:17:9.03:0,9,118	./.	0/0:22,0:18:8.95:0,9,65	0/0:7,0:7:10.26:0,10,56	0/0:1,0:2:5.95:0,6,42
chr10	78576557	.	CACGCACAA	C	1439.27	PASS	AB=1.000;AC=13;AF=0.260;AN=50;BaseQRankSum=3.468;DP=401;FS=25.309;HRun=0;HaplotypeScore=107.1572;InbreedingCoeff=0.5326;MQ=64.64;MQ0=10;MQRankSum=-2.166;QD=17.77;ReadPosRankSum=1.388;VQSLOD=1.2495;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:39.08:0,39,1088	0/0:5,0:5:0:0,0,0	0/0:28,0:17:50.66:0,51,1498	0/0:34,0:26:68.36:0,68,1979	./.	0/0:13,0:13:24.08:0,24,436	0/0:22,0:22:57.19:0,57,1631	1/1:5,11:14:29.41:696,29,0	0/0:17,0:15:33.11:0,33,609	0/1:6,0:6:21.85:272,0,22	1/1:7,0:7:2.61:68,3,0	0/0:15,0:15:16.05:0,16,174	0/0:15,0:14:13.58:0,14,92	0/0:15,0:15:33.11:0,33,1039	1/1:6,2:8:3.01:86,3,0	0/1:11,0:11:71.04:71,0,161	0/0:25,0:25:54.18:0,54,1670	0/0:14,0:14:42.14:0,42,1174	0/1:10,0:9:8.33:212,0,8	./.	1/1:19,0:14:3.48:65,3,0	0/0:11,0:11:17.54:0,18,176	0/0:13,0:13:23.94:0,24,248	0/0:27,0:26:37.38:0,37,364	./.	0/0:21,0:19:47.37:0,47,1288	1/1:3,1:4:6.02:122,6,0	0/0:7,0:7:20.90:0,21,510
chr10	78576561	.	CACAA	C	1145.30	PASS	AB=0.645;AC=17;AF=0.327;AN=52;BaseQRankSum=3.506;DP=413;FS=19.509;HRun=0;HaplotypeScore=93.0141;InbreedingCoeff=0.6636;MQ=70.55;MQ0=7;MQRankSum=-2.516;QD=11.81;ReadPosRankSum=0.244;VQSLOD=1.7125;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:41.96:0,42,898	0/1:0,5:5:0:0,0,0	0/0:31,0:20:45.05:0,45,1176	0/0:36,0:28:69.65:0,70,1465	1/1:5,2:6:3.01:45,3,0	0/0:13,0:13:27.09:0,27,429	0/0:24,0:24:66.22:0,66,1398	1/1:14,0:14:29.76:506,30,0	0/0:21,0:20:43.50:0,43,656	0/1:3,4:7:6.91:237,0,7	1/1:7,0:7:2.61:50,3,0	0/0:16,0:16:43.08:0,43,431	0/0:15,0:15:42.66:0,43,439	0/0:15,0:15:36.11:0,36,776	1/1:7,1:8:3.01:62,3,0	0/1:9,3:12:47.58:48,0,134	0/0:23,0:23:54.66:0,55,1198	0/0:13,0:13:39.12:0,39,803	1/1:7,3:9:9.03:161,9,0	./.	1/1:16,4:15:2.94:41,3,0	0/0:12,0:12:33.02:0,33,392	0/0:13,0:13:32.89:0,33,358	0/0:26,0:25:60.09:0,60,750	./.	0/0:20,0:19:48.16:0,48,1032	1/1:6,1:7:14.87:163,15,0	0/0:7,0:7:18.06:0,18,384
chr10	78577807	.	T	TA	4156.38	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-14.275;DP=710;FS=5.920;HRun=7;HaplotypeScore=62.6305;InbreedingCoeff=0.9995;MQ=73.56;MQ0=0;MQRankSum=-3.292;QD=29.69;ReadPosRankSum=2.634;VQSLOD=4.2608;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,42:43:99:1506,126,0	0/0:10,0:10:27.04:0,27,261	0/0:21,0:21:48.51:0,49,448	0/0:13,0:13:33.02:0,33,308	0/0:41,0:41:99:0,111,1061	1/1:2,20:22:60.15:709,60,0	1/1:6,26:32:51.16:616,51,0	0/0:22,0:22:57.08:0,57,543	0/0:25,0:25:52.13:0,52,588	0/0:33,0:33:87.12:0,87,836	0/0:24,0:24:63.10:0,63,608	0/0:14,0:14:30.01:0,30,281	0/0:21,0:21:57.07:0,57,540	0/0:24,0:24:66.10:0,66,637	0/0:27,0:27:77.85:0,78,728	0/0:26,0:26:72.07:0,72,678	0/0:25,0:25:69.07:0,69,654	0/0:16,0:15:42:0,42,390	0/0:24,0:24:60.05:0,60,570	0/0:33,0:33:84.10:0,84,795	0/0:17,0:17:39.04:0,39,370	0/0:27,0:27:72.11:0,72,695	0/0:27,0:27:78.11:0,78,747	0/0:29,0:29:84.12:0,84,805	0/0:31,0:31:90.07:0,90,841	1/1:6,23:30:72.20:854,72,0	0/0:40,0:40:99:0,108,1024	1/1:0,13:13:39.12:471,39,0
chr10	78578738	.	TTAA	T	4973.03	PASS	AB=0.917;AC=29;AF=0.518;AN=56;BaseQRankSum=-0.069;DP=435;FS=2.412;HRun=0;HaplotypeScore=76.6940;InbreedingCoeff=0.8894;MQ=82.55;MQ0=4;MQRankSum=-1.734;QD=24.50;ReadPosRankSum=0.899;VQSLOD=4.8187;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:51.08:0,51,619	1/1:1,1:2:2.99:51,3,0	0/0:35,0:18:27.84:0,28,482	0/0:32,0:23:39.26:0,39,498	1/1:0,9:9:23.76:260,24,0	0/0:12,0:12:34.14:0,34,359	0/0:15,0:16:27.21:0,27,379	1/1:10,4:14:16.31:311,16,0	0/0:6,0:6:18.01:0,18,297	1/1:0,21:23:64.68:788,65,0	1/1:0,16:16:29.47:338,29,0	0/1:10,0:11:24.60:25,0,128	0/0:18,0:18:18.51:0,19,236	0/0:14,0:14:37.65:0,38,644	1/1:0,22:24:36.01:520,36,0	1/1:0,16:18:29.57:441,30,0	0/0:21,0:21:54.16:0,54,1061	0/0:13,0:13:39.05:0,39,721	1/1:5,3:8:19.32:262,19,0	1/1:2,5:9:12.19:246,12,0	1/1:0,7:8:12.01:205,12,0	0/0:9,0:9:23.60:0,24,157	0/0:14,0:14:36.05:0,36,277	0/0:20,0:20:29.85:0,30,305	1/1:0,13:13:18.02:283,18,0	1/1:0,1:14:38.78:403,39,0	1/1:1,22:24:28.76:532,29,0	1/1:0,0:10:24.08:311,24,0
chr10	78578739	.	TAA	T	2170.22	PASS	AB=0.797;AC=39;AF=0.696;AN=56;BaseQRankSum=3.251;DP=444;FS=2.985;HRun=16;HaplotypeScore=80.7901;InbreedingCoeff=0.6664;MQ=84.50;MQ0=4;MQRankSum=-1.599;QD=7.38;ReadPosRankSum=3.329;VQSLOD=0.7700;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:21:25.11:0,25,145	1/1:2,0:2:2.86:15,3,0	0/0:38,0:19:27.52:0,28,272	0/0:34,0:25:38.54:0,39,287	1/1:9,0:9:17.52:115,18,0	0/1:8,0:12:5.79:6,0,56	0/1:7,1:16:18.61:19,0,66	0/1:16,0:16:7.70:35,0,8	0/0:7,0:7:17.97:0,18,184	1/1:23,0:23:36.35:213,36,0	1/1:16,0:16:14.03:73,14,0	1/1:4,4:11:7.04:138,7,0	1/1:3,12:18:26.32:240,26,0	0/0:12,1:15:12.23:0,12,325	1/1:24,0:24:30.06:162,30,0	1/1:18,0:18:25.67:142,26,0	0/0:18,0:21:47.46:0,47,549	0/0:13,0:13:36.05:0,36,425	1/1:8,0:8:8.19:48,8,0	1/1:9,0:9:0.55:78,1,0	1/1:8,0:8:11.49:62,11,0	1/1:2,7:9:17.91:150,18,0	1/1:6,7:14:8.33:116,8,0	1/1:4,13:20:29.43:269,29,0	1/1:13,0:13:14.49:81,14,0	1/1:14,0:14:22.20:105,22,0	1/1:24,0:24:34.46:199,34,0	1/1:10,0:10:22.22:101,22,0
chr10	78578836	.	CTTG	C	2262.05	PASS	AB=0.917;AC=23;AF=0.442;AN=52;BaseQRankSum=7.336;DP=420;FS=42.686;HRun=0;HaplotypeScore=84.8431;InbreedingCoeff=0.8477;MQ=68.38;MQ0=24;MQRankSum=0.519;QD=14.41;ReadPosRankSum=-2.884;VQSLOD=1.0859;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:33.02:0,33,477	1/1:9,0:9:2.99:49,3,0	0/0:35,0:16:45.10:0,45,874	0/0:26,0:17:36.59:0,37,643	1/1:20,0:17:3.01:49,3,0	0/0:21,0:21:62.85:0,63,1020	0/0:16,0:16:45.07:0,45,784	1/1:2,17:18:36.10:558,36,0	0/0:10,0:10:27.09:0,27,497	1/1:11,0:10:21.02:306,21,0	0/1:10,0:10:0:0,0,0	0/0:11,0:10:27.07:0,27,454	0/0:10,0:10:30.10:0,30,605	0/0:10,0:10:30.10:0,30,558	1/1:8,1:6:9.03:134,9,0	1/1:10,0:7:12.04:203,12,0	0/0:17,0:17:44.82:0,45,876	0/0:20,0:18:47.81:0,48,692	1/1:19,0:18:30.08:440,30,0	1/1:13,1:11:3.01:49,3,0	./.	0/0:16,0:16:39.13:0,39,812	0/0:9,0:9:27.09:0,27,547	0/0:24,0:24:47.19:0,47,824	./.	1/1:17,0:14:33.06:484,33,0	1/1:15,0:15:11.81:150,12,0	1/1:2,0:2:3.01:34,3,0
chr10	78578837	.	TTGTTCTCTCTCTCTCTC	T	3441.74	PASS	AB=0.550;AC=23;AF=0.442;AN=52;BaseQRankSum=7.003;DP=418;FS=44.863;HRun=0;HaplotypeScore=157.7772;InbreedingCoeff=0.8475;MQ=68.22;MQ0=26;MQRankSum=0.586;QD=22.35;ReadPosRankSum=-2.486;VQSLOD=0.9251;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:33.11:0,33,1088	1/1:0,0:9:2.98:49,3,0	0/0:35,0:16:45.10:0,45,874	0/0:26,0:17:36.12:0,36,681	1/1:5,13:17:3.01:49,3,0	0/0:22,0:22:63.60:0,64,1709	0/0:16,0:15:45.07:0,45,1042	1/1:18,0:17:36.10:558,36,0	0/0:10,0:10:27.09:0,27,658	1/1:1,10:10:20.77:468,21,0	0/1:2,8:10:0:0,0,0	0/0:11,0:10:27.07:0,27,642	0/0:10,0:10:30.10:0,30,927	0/0:10,0:10:30.10:0,30,788	1/1:7,0:6:9.03:241,9,0	1/1:8,0:7:12.04:203,12,0	0/0:16,0:17:45.15:0,45,1752	0/0:19,0:17:48.06:0,48,1812	1/1:3,1:18:30.08:524,30,0	1/1:4,0:10:3.01:49,3,0	./.	0/0:16,0:16:39.13:0,39,1328	0/0:10,0:10:27.09:0,27,756	0/0:23,0:23:48.63:0,49,2151	./.	1/1:3,1:14:29.49:656,29,0	1/1:0,14:15:11.82:495,12,0	1/1:0,1:1:3.01:149,3,0
chr10	78580292	.	AAGGG	A	2669.81	PASS	AB=0.719;AC=21;AF=0.389;AN=54;BaseQRankSum=-0.329;DP=300;FS=37.864;HRun=0;HaplotypeScore=87.9897;InbreedingCoeff=0.4855;MQ=57.71;MQ0=1;MQRankSum=-2.896;QD=16.90;ReadPosRankSum=3.617;VQSLOD=1.6492;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:24.08:0,24,472	./.	0/0:15,0:14:17.98:0,18,348	0/0:17,0:14:22.59:0,23,394	1/1:2,5:7:2.70:51,3,0	0/0:6,0:6:12.04:0,12,302	0/0:14,0:14:32.79:0,33,762	0/1:6,6:12:44.39:215,0,44	0/0:9,0:9:13.51:0,14,308	1/1:6,11:17:9.63:534,10,0	1/1:2,5:7:9.03:154,9,0	0/0:5,0:5:9.03:0,9,226	0/0:8,0:8:15.52:0,16,322	0/0:6,0:6:15.05:0,15,328	0/1:4,6:10:45.43:45,0,61	1/1:4,10:14:9.67:346,10,0	0/0:10,0:10:15.05:0,15,324	0/0:8,0:8:15.05:0,15,357	0/1:7,1:8:33.45:33,0,218	1/1:3,14:17:7.57:344,8,0	0/1:16,6:22:16.10:16,0,247	0/0:8,0:8:15.05:0,15,300	0/0:10,0:10:15.05:0,15,295	0/0:12,0:12:30.10:0,30,725	1/1:4,5:9:9.03:154,9,0	0/1:7,10:17:99:473,0,106	1/1:6,10:16:23.62:388,24,0	1/1:0,2:2:6.02:103,6,0
chr10	78580405	.	C	CAG	206.30	PASS	AB=0.866;AC=8;AF=0.143;AN=56;BaseQRankSum=1.565;DP=249;FS=16.767;HRun=0;HaplotypeScore=49.1559;InbreedingCoeff=-0.0676;MQ=63.78;MQ0=0;MQRankSum=-3.121;QD=3.75;ReadPosRankSum=-1.129;VQSLOD=-0.0559;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:50.90:0,51,634	1/1:1,0:1:0.47:1,0,0	0/0:10,0:9:21:0,21,261	0/0:13,0:10:11.21:0,11,112	0/0:5,1:6:3.01:0,3,39	0/0:8,0:8:21.07:0,21,272	0/0:9,0:9:20.73:0,21,271	0/0:18,1:19:42.13:0,42,536	0/0:7,0:7:14.14:0,14,195	0/1:8,1:9:75.79:76,0,212	0/0:3,2:5:3.01:0,3,40	0/0:9,0:9:27.09:0,27,350	0/0:8,0:8:21.03:0,21,256	0/0:5,0:5:15.05:0,15,197	0/0:9,1:10:27.03:0,27,316	0/1:4,1:5:39.06:39,0,87	0/0:4,0:4:9.03:0,9,118	0/0:6,0:6:18.06:0,18,233	0/1:8,1:9:24.26:24,0,267	0/0:6,0:6:12.04:0,12,158	0/0:20,0:20:12:0,12,138	0/0:7,0:7:14.85:0,15,166	0/0:9,0:9:24.08:0,24,309	0/0:8,0:8:17.99:0,18,200	0/1:8,2:10:45.16:45,0,266	0/1:6,2:8:81.53:82,0,169	0/1:12,1:13:62.61:63,0,307	0/0:6,0:6:18.06:0,18,236
chr10	78580583	.	C	CTA	15029.84	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-11.462;DP=577;FS=10.144;HRun=0;HaplotypeScore=67.3743;InbreedingCoeff=0.9986;MQ=89.09;MQ0=1;MQRankSum=-2.838;QD=53.11;ReadPosRankSum=2.477;VQSLOD=5.1330;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.30:0,87,1330	1/1:0,6:6:18.06:348,18,0	0/0:21,0:21:60.17:0,60,879	0/0:24,0:25:55.13:0,55,937	1/1:0,19:18:48.16:927,48,0	0/0:26,0:26:75.25:0,75,1146	0/0:20,0:20:57.19:0,57,871	1/1:3,30:34:99:1900,102,0	0/0:23,0:23:66.22:0,66,1008	1/1:1,28:29:84.27:1579,84,0	1/1:0,15:15:45.15:869,45,0	0/0:21,0:21:63.21:0,63,961	0/0:18,0:18:48.16:0,48,735	0/0:26,0:26:78.26:0,78,1194	1/1:0,22:23:60.21:1158,60,0	1/1:1,20:22:57.20:1101,57,0	0/0:19,0:19:57.15:0,57,825	0/0:19,0:19:54.18:0,54,827	1/1:2,8:10:27.09:510,27,0	1/1:1,17:18:48.16:927,48,0	1/1:1,25:27:75.26:1448,75,0	0/0:11,0:11:33.11:0,33,502	0/0:15,0:15:36.12:0,36,546	0/0:19,0:19:54.12:0,54,775	1/1:1,18:19:48.16:927,48,0	1/1:2,17:19:54.18:1023,54,0	1/1:0,31:32:90.31:1733,90,0	1/1:0,10:10:30.10:579,30,0
chr10	78581992	.	AT	A	10051.48	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=13.361;DP=542;FS=9.200;HRun=7;HaplotypeScore=67.4286;InbreedingCoeff=0.8742;MQ=73.49;MQ0=0;MQRankSum=0.137;QD=26.24;ReadPosRankSum=-0.955;VQSLOD=4.8854;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.27:0,84,1057	1/1:0,5:5:15.03:153,15,0	0/0:10,0:9:0.58:0,1,84	0/1:10,0:10:11.46:11,0,108	1/1:0,28:28:84.19:857,84,0	0/0:26,0:26:78.25:0,78,981	0/0:17,1:18:20.54:0,21,559	1/1:4,31:35:87.19:888,87,0	0/0:19,0:19:57.16:0,57,702	1/1:0,13:13:39.06:389,39,0	1/1:1,16:17:42.09:429,42,0	1/1:1,17:18:45.10:459,45,0	1/1:1,24:25:69.16:704,69,0	0/0:15,0:15:39.12:0,39,491	1/1:2,20:22:54.12:551,54,0	1/1:2,29:31:40.40:728,40,0	0/0:24,0:24:72.23:0,72,906	0/0:18,0:18:54.17:0,54,679	1/1:4,19:23:57.08:568,57,0	1/1:1,27:28:78.18:796,78,0	1/1:2,14:16:39.08:398,39,0	1/1:1,10:11:30.07:306,30,0	1/1:1,20:21:57.13:581,57,0	1/1:0,33:33:93.21:949,93,0	1/1:3,12:15:36.08:367,36,0	1/1:0,16:16:45.10:459,45,0	1/1:0,11:11:30.07:306,30,0	1/1:0,5:5:15.03:153,15,0
chr10	78582249	.	AAGG	A	14786.41	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=11.699;DP=543;FS=1.969;HRun=0;HaplotypeScore=88.7394;InbreedingCoeff=0.9962;MQ=89.54;MQ0=0;MQRankSum=-7.600;QD=41.89;ReadPosRankSum=3.161;VQSLOD=6.4103;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.26:0,81,1794	1/1:0,6:6:14.94:256,15,0	0/0:28,0:28:83.86:0,84,1673	0/0:20,0:20:38.25:0,38,717	1/1:1,20:21:51.09:807,51,0	0/0:21,0:21:63.22:0,63,1451	0/0:18,0:18:48.16:0,48,1105	1/1:1,26:27:78.18:1244,78,0	0/0:17,0:17:51.18:0,51,1176	1/1:0,17:17:51.15:813,51,0	1/1:1,20:21:51.09:835,51,0	1/1:2,16:18:45.11:736,45,0	1/1:2,22:24:53.98:891,54,0	0/0:21,0:21:63.19:0,63,1328	1/1:1,17:18:42.04:654,42,0	1/1:0,18:18:48.16:819,48,0	0/0:22,0:22:63.19:0,63,1352	0/0:16,0:16:45.15:0,45,1035	1/1:1,16:17:44.71:700,45,0	1/1:2,29:31:75.09:1182,75,0	1/1:1,8:9:21.07:358,21,0	1/1:1,16:17:45.15:767,45,0	1/1:0,16:16:42.10:685,42,0	1/1:1,21:22:48.16:818,48,0	1/1:0,18:18:45.15:767,45,0	1/1:0,22:22:66.23:1125,66,0	1/1:0,23:23:57.20:971,57,0	1/1:1,7:8:21.54:359,22,0
chr10	78583091	.	AC	A	10773.72	PASS	AB=0.522;AC=37;AF=0.661;AN=56;BaseQRankSum=11.575;DP=669;FS=30.026;HRun=7;HaplotypeScore=80.4922;InbreedingCoeff=0.9335;MQ=84.41;MQ0=0;MQRankSum=-3.006;QD=25.71;ReadPosRankSum=2.481;VQSLOD=3.1158;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,123,1504	1/1:1,13:14:39.09:398,39,0	0/0:22,0:22:54.10:0,54,638	0/0:24,1:25:36.55:0,37,652	1/1:2,22:24:66.15:673,66,0	0/0:27,0:27:73.99:0,74,881	0/0:29,0:29:75.24:0,75,943	1/1:1,16:17:45.03:430,45,0	0/0:31,0:31:87.26:0,87,1068	1/1:4,26:30:81.17:818,81,0	1/1:4,7:11:21.04:214,21,0	1/1:0,19:19:57.13:581,57,0	1/1:3,20:23:69.09:683,69,0	0/0:20,0:20:60.19:0,60,755	1/1:3,28:31:69.15:700,69,0	1/1:4,21:25:19.39:513,19,0	0/0:34,0:34:99:0,102,1264	0/0:17,0:17:45.13:0,45,550	1/1:3,17:20:48.05:479,48,0	1/1:2,26:29:77.20:770,77,0	1/1:5,21:26:57.13:582,57,0	1/1:1,18:19:48.11:489,48,0	1/1:1,23:24:63.14:642,63,0	0/1:2,22:24:6.32:573,0,6	1/1:3,13:16:36.08:368,36,0	1/1:1,17:18:51.10:513,51,0	1/1:1,32:33:84.19:856,84,0	1/1:0,16:16:48.11:490,48,0
chr10	78584125	.	T	TG	1669.12	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.201;DP=449;FS=0.000;HRun=6;HaplotypeScore=84.8845;InbreedingCoeff=0.9125;MQ=63.04;MQ0=6;MQRankSum=2.956;QD=27.82;ReadPosRankSum=1.152;VQSLOD=4.0809;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:29:69.22:868,69,0	0/0:6,0:6:9.02:0,9,92	0/0:9,0:5:14.96:0,15,135	0/0:17,0:8:15.42:0,15,140	0/0:24,0:24:57.12:0,57,581	1/1:2,17:19:45.14:566,45,0	1/1:1,11:12:30.10:377,30,0	0/0:20,0:15:33.07:0,33,337	0/0:17,0:17:42.09:0,42,427	0/0:14,0:14:36.08:0,36,367	0/0:18,0:18:45.10:0,45,459	0/0:9,0:9:18.04:0,18,183	0/0:13,0:13:36.06:0,36,357	0/0:9,0:9:21.05:0,21,214	0/0:21,0:21:57.13:0,57,581	0/0:11,0:12:35.11:0,35,343	0/0:26,0:26:75.16:0,75,759	0/0:24,0:24:66.13:0,66,666	0/0:13,0:12:21.03:0,21,214	0/0:19,0:19:54.11:0,54,543	0/0:31,0:31:72.16:0,72,735	0/0:3,0:3:6.01:0,6,61	0/0:9,0:9:15.02:0,15,153	0/0:20,0:20:30.05:0,30,306	0/0:23,0:23:57.13:0,57,582	0/0:17,0:17:33.02:0,33,326	0/0:11,0:11:21.03:0,21,207	0/0:4,0:4:12.03:0,12,122
chr10	78584149	.	T	TG	6956	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=5.583;DP=444;FS=0.882;HRun=7;HaplotypeScore=83.3593;InbreedingCoeff=0.9513;MQ=66.45;MQ0=0;MQRankSum=0.308;QD=23.82;ReadPosRankSum=2.159;VQSLOD=5.1240;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.09:0,69,661	1/1:0,7:7:12.04:144,12,0	0/0:7,0:7:12.02:0,12,116	0/0:10,0:9:20.99:0,21,182	1/1:4,25:29:78.24:941,78,0	0/0:16,0:16:39:0,39,365	0/0:14,0:14:35.73:0,36,347	1/1:2,13:13:33.09:386,33,0	0/0:16,0:16:45.06:0,45,428	1/1:5,11:16:33.09:387,33,0	1/1:3,17:20:48.15:579,48,0	1/1:3,0:8:14.44:76,14,0	1/1:6,0:18:23.16:127,23,0	0/0:11,0:11:30.05:0,30,290	1/1:2,18:20:48.15:580,48,0	1/1:0,11:11:33.10:399,33,0	0/0:29,0:29:75.07:0,75,714	0/0:24,0:24:62.90:0,63,566	1/1:1,10:11:30.08:352,30,0	1/1:0,18:18:42.09:490,42,0	1/1:4,23:28:60.05:703,60,0	1/1:0,1:4:2.84:14,3,0	1/1:5,0:12:16.95:86,17,0	1/1:4,0:22:22.35:110,22,0	1/1:1,19:20:54.17:652,54,0	1/1:1,16:17:48.14:569,48,0	1/1:2,8:10:17.93:217,18,0	1/1:1,5:6:12.04:145,12,0
chr10	78584267	.	T	TAA	12802.86	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-12.152;DP=379;FS=3.191;HRun=3;HaplotypeScore=39.2410;InbreedingCoeff=0.9442;MQ=65.11;MQ0=1;MQRankSum=-0.299;QD=47.42;ReadPosRankSum=0.646;VQSLOD=4.1621;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.13:0,39,544	1/1:0,7:7:18.06:327,18,0	0/0:6,0:6:14.73:0,15,144	0/0:6,0:4:6.02:0,6,84	1/1:1,19:20:57.20:1034,57,0	0/0:13,0:13:39.13:0,39,545	0/0:7,0:7:21.07:0,21,293	1/1:7,23:26:69.24:1235,69,0	0/0:8,0:8:24.08:0,24,336	1/1:0,23:23:66.23:1191,66,0	1/1:2,20:22:63.21:1095,63,0	1/1:0,5:5:12.04:218,12,0	1/1:0,11:11:30.10:544,30,0	0/0:10,0:10:30.10:0,30,420	1/1:0,10:10:24.08:436,24,0	1/1:0,10:10:21.07:381,21,0	0/0:28,0:28:84.28:0,84,1174	0/0:17,0:18:53.97:0,54,726	1/1:2,14:14:42.14:752,42,0	1/1:1,10:11:27.09:490,27,0	1/1:0,8:8:21.07:381,21,0	1/1:0,1:1:3.01:54,3,0	1/1:1,11:12:27.05:455,27,0	1/1:0,7:7:21.07:381,21,0	1/1:0,20:20:54.19:980,54,0	1/1:0,12:12:36.12:631,36,0	1/1:2,17:19:51.17:914,51,0	1/1:0,24:24:72.25:1306,72,0
chr10	78584576	.	T	TA	8600	PASS	AB=0.950;AC=45;AF=0.804;AN=56;BaseQRankSum=-2.497;DP=634;FS=5.840;HRun=11;HaplotypeScore=81.8577;InbreedingCoeff=0.8398;MQ=73.01;MQ0=0;MQRankSum=-1.750;QD=16.73;ReadPosRankSum=-1.079;VQSLOD=5.2410;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,30:36:28.68:654,29,0	1/1:0,6:7:20.83:185,21,0	0/0:11,0:12:0.92:0,1,63	0/1:18,1:19:1.11:1,0,131	1/1:3,11:14:9.91:281,10,0	1/1:3,16:19:21.22:375,21,0	1/1:5,14:19:15.84:342,16,0	1/1:15,24:40:14.15:636,14,0	0/0:24,2:26:27.86:0,28,402	1/1:12,16:28:27.39:410,27,0	1/1:6,21:27:48.49:475,48,0	1/1:5,0:26:42.74:219,43,0	1/1:7,0:27:42.61:214,43,0	0/0:21,1:22:16.62:0,17,353	1/1:7,21:28:16.61:521,17,0	1/1:2,26:28:65.87:651,66,0	0/0:30,1:31:37.73:0,38,473	0/0:27,0:29:63.81:0,64,476	1/1:3,20:23:60.06:587,60,0	1/1:1,14:15:36.84:335,37,0	1/1:9,10:19:6.69:232,7,0	1/1:1,1:11:20.30:127,20,0	1/1:1,0:15:27.91:138,28,0	1/1:4,1:12:14.37:87,14,0	1/1:0,18:19:33.50:325,33,0	1/1:5,19:24:54.11:548,54,0	1/1:9,22:32:35.36:633,35,0	1/1:2,23:26:62.96:623,63,0
chr10	78584996	.	TC	T	22081.67	PASS	AB=0.517;AC=37;AF=0.661;AN=56;BaseQRankSum=18.740;DP=843;FS=0.551;HRun=1;HaplotypeScore=119.3074;InbreedingCoeff=0.9297;MQ=82.55;MQ0=0;MQRankSum=-4.976;QD=38.54;ReadPosRankSum=2.130;VQSLOD=4.6092;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,2240	1/1:0,21:21:60.20:839,60,0	0/0:19,0:19:57.17:0,57,876	0/0:28,0:28:69.33:0,69,1192	1/1:0,20:20:60.20:838,60,0	0/0:20,0:20:60.19:0,60,933	0/0:34,0:34:99:0,102,1629	1/1:0,26:26:78.26:1089,78,0	0/0:27,0:27:78.25:0,78,1223	1/1:0,41:41:99:1648,120,0	1/1:0,20:20:54.18:755,54,0	1/1:0,31:31:87.29:1217,87,0	1/1:0,36:36:96.32:1340,96,0	0/0:30,0:30:90.29:0,90,1416	1/1:0,34:34:90.30:1259,90,0	0/1:2,29:31:8.65:1046,0,9	0/0:34,0:34:99:0,99,1560	0/0:30,0:30:87.30:0,87,1382	1/1:0,29:29:87.29:1213,87,0	1/1:0,33:33:90.26:1236,90,0	1/1:0,48:48:99:1846,132,0	1/1:0,30:30:75.25:1045,75,0	1/1:0,30:30:72.18:1007,72,0	1/1:0,33:33:93.31:1300,93,0	1/1:0,24:24:66.22:922,66,0	1/1:0,35:35:99:1469,105,0	1/1:0,34:34:96.32:1342,96,0	1/1:0,17:17:48.16:671,48,0
chr10	78585713	.	A	AGTGC	4739.97	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=-2.429;DP=662;FS=4.438;HRun=0;HaplotypeScore=129.8482;InbreedingCoeff=0.6885;MQ=68.63;MQ0=0;MQRankSum=-1.073;QD=24.95;ReadPosRankSum=-0.547;VQSLOD=4.4216;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:78.18:0,78,1252	0/0:13,0:13:7.08:0,7,273	0/0:20,0:19:35.94:0,36,597	0/0:27,0:25:37.17:0,37,621	0/1:17,0:17:14.92:15,0,258	0/0:23,0:23:60.21:0,60,1021	0/0:27,0:27:63.18:0,63,1014	0/0:29,0:29:41.57:0,42,590	0/0:24,0:23:63.18:0,63,1036	0/0:23,0:23:41.18:0,41,601	0/1:17,0:17:0.69:1,0,372	1/1:20,4:24:48.53:1122,49,0	1/1:22,0:22:18.55:1018,19,0	0/0:32,0:32:78.25:0,78,1313	0/1:31,0:31:1.78:2,0,637	0/0:29,0:29:21.67:0,22,656	0/0:33,0:33:90.24:0,90,1457	0/0:14,0:14:39.11:0,39,642	0/1:20,0:20:5.88:6,0,281	0/0:18,0:18:34.33:0,34,407	0/0:48,0:48:82.35:0,82,1342	1/1:17,0:17:27.07:557,27,0	1/1:17,0:16:30.03:541,30,0	1/1:24,0:24:66.15:1478,66,0	0/0:24,0:24:29.13:0,29,548	0/0:30,0:30:69.13:0,69,759	0/0:19,0:19:51.14:0,51,598	0/0:6,0:6:15.04:0,15,180
chr10	78585723	.	T	TGC	2063.48	PASS	AB=0.830;AC=10;AF=0.179;AN=56;BaseQRankSum=7.486;DP=656;FS=3.040;HRun=0;HaplotypeScore=117.8384;InbreedingCoeff=0.4570;MQ=72.13;MQ0=0;MQRankSum=-2.811;QD=14.43;ReadPosRankSum=0.411;VQSLOD=3.7064;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1474	0/0:11,0:11:12.79:0,13,207	0/0:18,0:18:47.88:0,48,704	0/0:26,0:25:61.08:0,61,869	0/1:19,0:19:12.48:12,0,161	0/0:26,0:26:69.23:0,69,1053	0/0:26,0:26:69.23:0,69,1053	0/0:28,0:28:57.98:0,58,448	0/0:23,0:23:69.20:0,69,1010	0/0:25,0:25:49.25:0,49,402	0/1:16,0:16:1.23:1,0,214	1/1:9,15:23:9.81:539,10,0	1/1:8,12:21:10.98:455,11,0	0/0:30,0:30:81.24:0,81,1187	0/0:27,0:27:0.21:0,0,371	0/0:28,0:28:23.60:0,24,410	0/0:35,0:35:99:0,99,1444	0/0:18,0:18:54.12:0,54,755	0/0:18,0:18:8.32:0,8,249	0/0:16,0:16:36.60:0,37,258	0/0:56,0:56:99:0,110,992	0/1:10,7:17:16.36:249,0,16	1/1:8,8:15:10.12:252,10,0	0/1:11,19:30:70.67:701,0,71	0/0:19,0:19:28.33:0,28,327	0/0:24,0:24:70.88:0,71,492	0/0:19,0:19:56.28:0,56,398	0/0:6,0:6:14.87:0,15,111
chr10	78585725	.	T	TGC	1930.39	PASS	AB=0.661;AC=6;AF=0.107;AN=56;BaseQRankSum=9.352;DP=655;FS=1.988;HRun=0;HaplotypeScore=118.3083;InbreedingCoeff=0.2199;MQ=72.15;MQ0=0;MQRankSum=-2.632;QD=17.39;ReadPosRankSum=1.171;VQSLOD=3.7072;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.33:0,96,1459	0/0:11,0:11:32.75:0,33,248	0/0:17,0:17:47.13:0,47,632	0/0:26,0:25:47.70:0,48,818	0/0:18,0:18:18.49:0,18,218	0/0:25,0:25:72.23:0,72,1078	0/0:26,0:26:75.22:0,75,1101	0/0:28,0:28:40.66:0,41,449	0/0:23,0:23:66.21:0,66,986	0/0:24,0:24:42.37:0,42,400	0/0:15,0:15:38.49:0,38,273	0/1:10,15:24:3.42:520,0,3	1/1:7,13:20:2.21:399,2,0	0/0:29,0:29:84.24:0,84,1215	0/0:26,0:26:48.04:0,48,420	0/0:30,0:30:58.08:0,58,533	0/0:34,0:34:96.29:0,96,1423	0/0:18,0:18:54.12:0,54,756	0/0:18,0:18:4.39:0,4,261	0/0:17,0:17:19.40:0,19,253	0/0:54,0:54:99:0,113,937	0/1:11,7:18:13.04:273,0,13	0/1:9,8:16:55.25:161,0,55	0/1:12,19:31:36.57:696,0,37	0/0:20,0:20:53.27:0,53,370	0/0:24,0:24:70.86:0,71,488	0/0:20,0:20:10.39:0,10,333	0/0:6,0:6:17.88:0,18,134
chr10	78585895	.	GA	G	3098.10	PASS	AB=0.694;AC=24;AF=0.429;AN=56;BaseQRankSum=1.796;DP=578;FS=0.795;HRun=12;HaplotypeScore=69.1469;InbreedingCoeff=0.8556;MQ=63.83;MQ0=1;MQRankSum=1.091;QD=12.65;ReadPosRankSum=2.185;VQSLOD=3.8670;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:43:20.01:0,20,116	1/1:3,6:9:5.82:46,6,0	0/0:12,0:10:7.59:0,8,97	0/1:9,2:7:21.49:37,0,21	1/1:4,9:13:26.85:206,27,0	0/0:4,0:18:17.20:0,17,96	0/0:7,0:30:45.96:0,46,251	1/1:12,16:28:43.92:342,44,0	0/0:24,1:25:36.86:0,37,545	1/1:3,10:14:17.75:201,18,0	1/1:7,9:18:21.44:137,21,0	0/0:19,0:21:38.75:0,39,364	0/0:13,0:13:27.52:0,28,269	0/0:17,1:18:19.01:0,19,340	1/1:5,26:32:76.74:586,77,0	1/1:3,19:23:22.40:346,22,0	0/0:29,0:29:75.04:0,75,734	0/0:26,0:26:63.05:0,63,613	1/1:7,13:19:42.89:311,43,0	1/1:6,17:23:39.80:322,40,0	1/1:5,13:18:32.84:255,33,0	0/0:13,1:14:15.82:0,16,330	0/0:18,0:20:45.03:0,45,435	0/0:22,1:23:30.84:0,31,481	0/1:2,11:13:0.58:179,0,1	0/0:12,0:30:53.82:0,54,322	1/1:5,18:23:44.80:348,45,0	0/0:1,0:10:22.89:0,23,130
chr10	78585998	.	GA	G	3207.15	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.221;DP=705;FS=0.406;HRun=3;HaplotypeScore=74.0695;InbreedingCoeff=0.9993;MQ=78.79;MQ0=0;MQRankSum=-0.679;QD=28.38;ReadPosRankSum=0.543;VQSLOD=2.8225;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,111,1551	0/0:10,0:10:30.09:0,30,413	0/0:26,0:26:62.38:0,62,883	0/0:17,0:17:44.94:0,45,605	0/0:17,0:17:45.15:0,45,648	0/0:22,0:22:63.21:0,63,907	0/0:24,0:24:63.21:0,63,906	0/0:30,0:30:84.26:0,84,1163	0/0:32,0:32:93.28:0,93,1298	0/0:27,0:27:78.26:0,78,1116	0/0:19,0:19:51.17:0,51,734	1/1:0,21:21:60.19:744,60,0	1/1:1,24:25:51.16:632,51,0	0/0:28,1:29:50.07:0,50,1135	0/0:32,0:32:96.31:0,96,1364	0/0:21,0:21:63.15:0,63,865	0/0:39,0:39:99:0,114,1562	0/0:21,0:20:63.21:0,63,901	0/0:24,0:24:69.23:0,69,992	0/0:36,0:36:99:0,108,1521	0/0:39,0:39:99:0,114,1641	1/1:1,28:29:75.24:929,75,0	1/1:2,20:22:54.17:669,54,0	1/1:1,15:16:33.10:409,33,0	0/0:26,0:26:78.25:0,78,1090	0/0:22,0:22:66.21:0,66,934	0/0:28,0:28:81.25:0,81,1143	0/0:9,0:9:24.08:0,24,346
chr10	78586860	.	G	GGA	15644.03	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-2.006;DP=674;FS=2.386;HRun=0;HaplotypeScore=98.1683;InbreedingCoeff=0.8853;MQ=82.89;MQ0=0;MQRankSum=-3.812;QD=30.03;ReadPosRankSum=3.136;VQSLOD=6.6349;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,47:56:99:2210,135,0	1/1:7,0:7:12.03:126,12,0	0/0:36,0:30:62.08:0,62,760	0/0:39,0:33:4.44:0,4,424	1/1:22,0:22:10.64:432,11,0	1/1:2,25:28:63.22:1040,63,0	1/1:5,18:23:16.65:805,17,0	1/1:33,0:33:60.11:598,60,0	0/0:27,0:27:60.19:0,60,749	1/1:17,0:17:2.51:332,3,0	1/1:22,0:22:48.11:501,48,0	1/1:2,13:17:39.13:644,39,0	1/1:4,13:17:42.14:692,42,0	0/0:15,0:15:45.14:0,45,563	1/1:31,0:30:69.17:737,69,0	1/1:21,0:21:48.11:506,48,0	0/0:20,0:20:42.13:0,42,525	0/0:15,0:16:35.86:0,36,408	1/1:17,0:17:30.07:314,30,0	1/1:19,0:19:36.09:386,36,0	1/1:30,0:30:66.16:690,66,0	1/1:2,21:23:51.17:842,51,0	1/1:2,18:20:54.18:875,54,0	1/1:5,22:27:60.21:991,60,0	1/1:19,0:19:45.11:470,45,0	1/1:1,26:27:78.27:1280,78,0	1/1:42,1:43:99:1123,102,0	1/1:1,1:2:3.01:50,3,0
chr10	78586872	.	A	AGG	16338.07	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-2.042;DP=665;FS=0.000;HRun=1;HaplotypeScore=94.0000;InbreedingCoeff=0.6732;MQ=84.25;MQ0=0;MQRankSum=-4.235;QD=32.04;ReadPosRankSum=6.704;VQSLOD=4.7479;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:56,0:56:32.88:1019,33,0	1/1:1,4:5:15.01:251,15,0	0/0:39,0:34:82.03:0,82,1100	0/0:40,0:32:58.11:0,58,716	1/1:2,19:22:42.61:855,43,0	1/1:29,0:29:2.05:448,2,0	0/1:24,0:24:79.72:338,0,80	1/1:1,28:30:87.15:1375,87,0	0/0:25,0:25:69.04:0,69,978	1/1:2,18:20:48.17:824,48,0	1/1:1,21:22:48.16:926,48,0	1/1:16,0:16:38.94:317,39,0	0/1:17,0:17:23.91:300,0,24	0/0:18,0:18:54.15:0,54,763	1/1:1,26:26:72.20:1349,72,0	1/1:1,20:21:48.16:926,48,0	0/0:15,0:15:45.14:0,45,665	0/0:17,0:17:48:0,48,593	1/1:0,17:17:51.09:810,51,0	1/1:0,14:14:36.12:694,36,0	1/1:0,31:32:66.23:1273,66,0	1/1:19,0:19:50.93:419,51,0	0/1:22,0:22:12.52:382,0,13	1/1:23,0:23:38.01:481,38,0	1/1:0,23:23:45.15:865,45,0	1/1:27,0:27:52.60:521,53,0	1/1:1,42:43:99:1941,102,0	1/1:1,0:1:3:25,3,0
chr10	78587544	.	AAC	A	838.85	PASS	AB=0.950;AC=11;AF=0.196;AN=56;BaseQRankSum=3.043;DP=525;FS=15.390;HRun=0;HaplotypeScore=102.2047;InbreedingCoeff=0.8178;MQ=52.95;MQ0=18;MQRankSum=0.756;QD=10.11;ReadPosRankSum=-2.766;VQSLOD=1.5589;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:56.05:0,56,282	0/0:5,0:4:9.01:0,9,92	0/0:18,0:8:20.83:0,21,253	0/0:21,0:10:10.89:0,11,197	0/0:16,0:15:12.65:0,13,293	0/0:22,0:22:39.47:0,39,204	0/0:19,0:19:40.84:0,41,161	0/0:26,0:26:78.06:0,78,1037	0/0:17,0:14:42.13:0,42,644	0/0:20,0:18:48.03:0,48,555	0/0:15,0:15:29.98:0,30,374	1/1:11,1:11:8.80:111,9,0	1/1:16,1:15:17.74:167,18,0	0/0:23,0:21:57.10:0,57,824	0/0:14,0:13:30.01:0,30,325	0/0:16,0:16:36.10:0,36,492	0/0:45,0:45:99:0,123,1833	0/0:34,0:33:93.26:0,93,1398	0/0:12,0:12:33:0,33,383	0/0:21,0:21:46.21:0,46,511	1/1:5,0:4:4.67:24,5,0	1/1:15,0:12:30.34:257,30,0	0/1:18,1:18:10.12:224,0,10	1/1:13,2:14:25.18:223,25,0	0/0:20,0:19:36.09:0,36,422	0/0:20,0:18:39.90:0,40,438	0/0:16,0:16:40.89:0,41,486	0/0:4,0:4:12.03:0,12,124
chr10	78587545	.	AC	A	1279.66	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=5.478;DP=517;FS=19.555;HRun=1;HaplotypeScore=92.4672;InbreedingCoeff=0.5694;MQ=53.24;MQ0=17;MQRankSum=2.041;QD=7.40;ReadPosRankSum=-0.622;VQSLOD=-0.5933;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:28.78:98,0,29	0/0:5,0:4:8.93:0,9,65	0/0:19,0:9:20.04:0,20,198	0/0:20,0:10:8.11:0,8,135	0/1:15,0:14:20.50:21,0,185	0/1:22,0:22:31.84:32,0,66	0/1:19,0:19:8.80:37,0,9	0/0:26,0:26:77.76:0,78,765	0/0:17,0:14:42.12:0,42,501	0/0:19,0:17:47.77:0,48,399	0/0:15,0:15:16.05:0,16,243	1/1:8,2:10:14.52:143,15,0	1/1:3,13:15:17.95:207,18,0	0/0:22,0:20:57.09:0,57,647	0/0:14,0:13:29.70:0,30,218	0/0:16,0:16:35.93:0,36,361	0/0:45,0:45:99:0,126,1460	0/0:35,0:34:96.20:0,96,1105	0/0:11,0:11:32.82:0,33,281	0/0:20,0:20:30.27:0,30,317	1/1:4,0:3:6.99:42,7,0	1/1:11,4:12:32.87:326,33,0	1/1:7,12:18:1.58:307,2,0	1/1:10,5:14:26.84:250,27,0	0/0:20,0:19:35.72:0,36,276	0/0:19,0:18:14.50:0,15,234	0/0:16,0:16:18.40:0,18,296	0/0:4,0:4:11.69:0,12,69
chr10	78587546	.	CA	C	1555.52	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=2.814;DP=524;FS=2.172;HRun=8;HaplotypeScore=93.8528;InbreedingCoeff=0.5507;MQ=53.75;MQ0=15;MQRankSum=4.243;QD=8.79;ReadPosRankSum=0.322;VQSLOD=1.7728;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,32:36:73.36:696,73,0	0/0:5,0:4:5.88:0,6,35	0/0:19,0:9:20.51:0,21,205	0/0:21,0:10:14.10:0,14,155	0/0:17,0:16:15.99:0,16,162	1/1:4,17:21:30.04:289,30,0	1/1:2,17:19:42.06:405,42,0	0/0:26,0:26:65.72:0,66,667	0/0:18,0:15:42.12:0,42,496	0/0:19,0:18:32.77:0,33,282	0/0:16,0:16:28.45:0,28,252	0/1:10,0:10:15.79:26,0,16	0/1:17,0:16:2.96:50,0,3	0/0:21,0:19:51.16:0,51,615	0/0:14,0:13:23.60:0,24,157	0/0:16,0:16:32.82:0,33,314	0/0:44,0:44:99:0,123,1471	0/0:35,0:34:93.24:0,93,1105	0/0:12,0:12:21.52:0,22,208	0/0:21,0:21:37.55:0,38,284	0/1:4,0:3:1.39:1,0,12	1/1:14,0:12:11.09:57,11,0	0/1:19,0:18:7.06:82,0,7	1/1:15,0:14:0.89:53,1,0	0/0:19,0:18:32.50:0,32,232	0/1:22,0:21:67.18:71,0,67	0/0:19,0:19:40.14:0,40,289	0/0:5,0:5:9.86:0,10,35
chr10	78587548	.	A	AAAAAAAC	11052.48	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-7.471;DP=577;FS=4.594;HRun=0;HaplotypeScore=124.4259;InbreedingCoeff=0.9119;MQ=55.53;MQ0=15;MQRankSum=-8.360;QD=41.55;ReadPosRankSum=-4.110;VQSLOD=3.9088;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:60.06:0,60,1058	1/1:1,6:6:6.02:219,6,0	0/0:20,0:10:19.09:0,19,335	0/0:22,0:11:1.42:0,1,295	1/1:6,13:20:30.09:790,30,0	0/0:21,0:21:24.08:0,24,396	0/0:19,0:19:39.12:0,39,617	1/1:16,14:37:60.58:1580,61,0	0/0:18,0:15:36.11:0,36,752	1/1:8,14:22:36.11:1017,36,0	1/1:7,11:19:24.07:648,24,0	0/0:9,0:9:6.02:0,6,117	0/0:17,0:16:14.34:0,14,222	0/0:22,0:20:36.11:0,36,734	1/1:5,9:13:21.07:767,21,0	1/1:7,12:19:12.04:438,12,0	0/0:45,0:45:93.29:0,93,1854	0/0:36,0:35:66.21:0,66,1372	1/1:7,7:14:24.08:726,24,0	1/1:8,17:28:45.06:1178,45,0	1/1:5,0:4:9.90:113,10,0	0/0:14,0:12:9.70:0,10,200	0/0:20,0:19:17.63:0,18,240	0/0:13,0:12:17.38:0,17,286	1/1:7,15:23:27.09:985,27,0	1/1:3,0:25:57.13:1106,57,0	1/1:5,15:24:33.11:1196,33,0	1/1:0,0:6:12.04:288,12,0
chr10	78587901	.	CAGG	C	3430.66	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.174;DP=760;FS=5.885;HRun=0;HaplotypeScore=116.4904;InbreedingCoeff=0.9959;MQ=68.10;MQ0=0;MQRankSum=-5.814;QD=33.31;ReadPosRankSum=4.112;VQSLOD=3.8089;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,129,2781	0/0:10,0:10:30.10:0,30,669	0/0:35,0:35:99:0,99,2080	0/0:30,0:30:81.28:0,81,1764	0/0:19,0:19:45.13:0,45,921	0/0:32,0:32:90.29:0,90,1934	0/0:26,0:26:69.24:0,69,1512	0/0:32,0:32:90.31:0,90,1982	0/0:30,0:30:81.28:0,81,1781	0/0:27,0:27:69.22:0,69,1441	0/0:15,0:15:33.11:0,33,696	1/1:2,21:22:51.13:802,51,0	1/1:1,32:33:87.30:1415,87,0	0/0:43,0:43:99:0,126,2714	0/0:34,0:34:99:0,99,2138	0/0:31,0:31:78.24:0,78,1649	0/0:28,0:28:72.25:0,72,1549	0/0:22,0:22:66.15:0,66,1326	0/0:16,0:15:42.14:0,42,936	0/0:23,0:23:48.04:0,48,984	0/0:62,0:62:99:0,160,3404	1/1:3,13:16:30.06:461,30,0	1/1:2,8:10:15.05:245,15,0	1/1:4,17:21:33.06:509,33,0	0/0:15,0:15:38.29:0,38,777	0/0:25,0:25:66.23:0,66,1431	0/0:33,0:33:96.33:0,96,2109	0/0:18,0:18:51.18:0,51,1138
chr10	78587998	.	A	ATGG	3093.05	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.764;DP=787;FS=0.449;HRun=0;HaplotypeScore=157.8708;InbreedingCoeff=0.9827;MQ=58.03;MQ0=12;MQRankSum=-10.861;QD=24.74;ReadPosRankSum=-1.801;VQSLOD=3.4400;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,150,2220	0/0:11,0:11:33.04:0,33,431	0/0:25,0:13:32.81:0,33,359	0/0:27,0:16:26.14:0,26,548	0/0:42,0:42:99:0,117,1692	0/0:22,0:22:60.08:0,60,805	0/0:28,0:28:78.04:0,78,1035	0/0:29,0:26:66.07:0,66,905	0/0:27,0:27:81.21:0,81,1253	0/0:42,0:40:99:0,117,1794	0/0:19,0:18:48.07:0,48,658	1/1:15,14:28:69.13:1151,69,0	1/1:21,13:34:81.17:1215,81,0	0/0:22,0:22:57.18:0,57,934	0/0:27,0:27:81.19:0,81,1210	0/0:32,0:32:90.22:0,90,1368	0/0:33,0:33:93.21:0,93,1395	0/0:31,0:31:87.06:0,87,1211	0/0:22,0:19:48.17:0,48,671	0/0:25,0:25:57.14:0,57,861	0/0:45,0:45:99:0,126,1999	1/1:15,5:20:10.82:338,11,0	1/1:22,3:25:35.47:419,35,0	1/1:14,3:17:11.99:142,12,0	0/0:26,0:26:75.17:0,75,1112	0/0:31,0:31:74.02:0,74,1087	0/0:24,0:24:69.18:0,69,1075	0/0:14,0:14:30.08:0,30,407
chr10	78588010	.	ATGG	A	2053.65	PASS	AB=0.798;AC=11;AF=0.196;AN=56;BaseQRankSum=12.721;DP=763;FS=0.453;HRun=0;HaplotypeScore=155.2763;InbreedingCoeff=0.5396;MQ=52.33;MQ0=11;MQRankSum=-5.432;QD=12.52;ReadPosRankSum=-1.170;VQSLOD=2.9934;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,137,2517	0/0:8,0:8:21.07:0,21,433	0/0:26,0:11:29.71:0,30,271	0/0:25,0:11:27:0,27,390	0/0:49,0:49:99:0,130,2260	0/0:17,0:17:48.12:0,48,800	0/0:25,0:25:69.09:0,69,1102	0/0:29,0:26:70.81:0,71,1039	0/0:30,0:30:90.23:0,90,1701	0/0:42,0:40:99:0,120,2243	0/0:17,0:16:41.46:0,41,735	1/1:20,10:29:3.18:390,3,0	1/1:17,13:30:1.03:429,1,0	0/0:21,0:21:63.17:0,63,1249	0/0:25,0:25:75.17:0,75,1375	0/0:32,0:32:93.19:0,93,1743	0/0:34,0:34:83.33:0,83,1680	0/0:31,0:31:50.99:0,51,1214	0/0:18,0:17:24.31:0,24,638	0/0:24,0:24:60.10:0,60,1047	0/0:44,0:44:99:0,120,2288	1/1:11,7:18:3.20:164,3,0	0/1:22,5:27:26.26:249,0,26	0/1:11,5:16:4.42:51,0,4	0/0:29,0:28:75.18:0,75,1323	0/1:22,8:30:82.54:535,0,83	0/0:23,0:23:69.15:0,69,1262	1/1:0,13:13:27.09:383,27,0
chr10	78588043	.	G	GTGA	2351.19	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.825;DP=654;FS=8.297;HRun=0;HaplotypeScore=138.3694;InbreedingCoeff=0.9474;MQ=60.72;MQ0=3;MQRankSum=-10.453;QD=25.84;ReadPosRankSum=-0.271;VQSLOD=2.9495;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:93.05:0,93,1305	0/0:7,0:7:18.02:0,18,229	0/0:26,0:20:23.25:0,23,642	0/0:24,0:15:29.92:0,30,374	0/0:43,0:43:99:0,114,1697	0/0:17,0:17:51.09:0,51,719	0/0:24,0:24:66.19:0,66,951	0/0:24,0:24:48.15:0,48,705	0/0:25,0:25:60.20:0,60,901	0/0:29,0:28:72.22:0,72,1050	0/0:16,0:16:42.11:0,42,574	1/1:9,13:22:47.18:812,47,0	1/1:12,17:29:59.93:1005,60,0	0/0:21,0:21:51.16:0,51,749	0/0:24,0:24:63.21:0,63,941	0/0:28,0:28:54.18:0,54,814	0/0:27,0:27:72.12:0,72,997	0/0:27,0:27:34.69:0,35,734	0/0:23,0:23:33.54:0,34,520	0/0:17,0:17:48.16:0,48,721	0/0:32,0:32:68.78:0,69,989	1/1:5,5:10:12.04:223,12,0	1/1:5,12:18:23.48:429,23,0	1/1:9,3:12:3.01:48,3,0	0/0:24,0:24:60.19:0,60,886	0/0:24,0:24:47.89:0,48,699	0/0:24,0:23:60.17:0,60,860	0/0:17,0:17:36.09:0,36,486
chr10	78588065	.	G	GTTA	1936.65	PASS	AB=0.664;AC=8;AF=0.143;AN=56;BaseQRankSum=9.260;DP=579;FS=3.158;HRun=0;HaplotypeScore=109.5857;InbreedingCoeff=0.7387;MQ=63.28;MQ0=0;MQRankSum=-7.353;QD=29.34;ReadPosRankSum=-2.595;VQSLOD=2.9715;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:87.23:0,87,1210	0/0:8,0:8:18.06:0,18,262	0/0:19,0:18:31.34:0,31,418	0/0:18,0:14:12.03:0,12,163	0/0:37,0:37:99:0,99,1430	0/0:21,0:21:54.15:0,54,751	0/0:22,0:22:48.14:0,48,682	0/0:29,0:29:72.20:0,72,998	0/0:22,0:22:48.11:0,48,660	0/0:29,0:29:66.22:0,66,966	0/0:17,0:17:48.15:0,48,684	1/1:10,6:16:24.08:484,24,0	0/1:12,11:23:4.09:692,0,4	0/0:17,0:17:36.09:0,36,487	0/0:23,0:23:60.19:0,60,859	0/0:20,0:20:48.13:0,48,681	0/0:24,0:24:57.18:0,57,815	0/0:20,0:20:51.17:0,51,746	0/0:17,0:17:36.10:0,36,492	0/0:21,0:21:48.15:0,48,682	0/0:17,0:17:33.11:0,33,483	1/1:3,4:7:12.04:246,12,0	0/1:7,8:15:8.61:517,0,9	1/1:4,1:5:9.03:145,9,0	0/0:26,0:26:66.21:0,66,947	0/0:22,0:22:57.18:0,57,817	0/0:27,0:26:72.19:0,72,993	0/0:21,0:21:48.16:0,48,702
chr10	78589147	.	A	AG	5855.81	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.510;DP=725;FS=0.744;HRun=0;HaplotypeScore=76.3908;InbreedingCoeff=0.9998;MQ=70.34;MQ0=0;MQRankSum=-1.272;QD=43.70;ReadPosRankSum=1.630;VQSLOD=5.3572;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,1698	0/0:12,0:12:36.12:0,36,503	0/0:20,0:21:47.21:0,47,519	0/0:17,0:16:29.90:0,30,244	0/0:28,0:28:84.28:0,84,1174	0/0:24,0:24:72.20:0,72,942	0/0:19,0:19:57.17:0,57,779	0/0:33,0:33:96.29:0,96,1277	0/0:26,0:26:78.23:0,78,1056	0/0:34,0:33:99:0,102,1411	0/0:20,0:20:60.18:0,60,821	1/1:0,27:27:81.28:1294,81,0	1/1:0,25:26:72.24:1141,72,0	0/0:34,0:34:99:0,102,1374	0/0:26,0:26:75.25:0,75,1048	0/0:26,0:26:78.25:0,78,1073	0/0:35,0:35:99:0,102,1426	0/0:15,0:15:45.15:0,45,629	0/0:24,0:24:69.20:0,69,930	0/0:26,0:26:78.22:0,78,1053	0/0:30,0:30:90.26:0,90,1221	1/1:2,29:31:81.28:1291,81,0	1/1:0,22:22:57.08:895,57,0	1/1:0,28:28:78.27:1235,78,0	0/0:25,0:25:75.25:0,75,1048	0/0:31,0:31:93.29:0,93,1281	0/0:30,0:30:87.29:0,87,1214	0/0:11,0:11:33.11:0,33,461
chr10	78590745	.	TA	T	10116.98	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=16.150;DP=623;FS=1.815;HRun=7;HaplotypeScore=101.3878;InbreedingCoeff=0.9965;MQ=81.21;MQ0=0;MQRankSum=-2.292;QD=25.94;ReadPosRankSum=0.198;VQSLOD=4.7043;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.21:0,75,928	1/1:2,6:8:15.03:153,15,0	0/0:18,0:18:38.87:0,39,434	0/0:20,0:21:38.85:0,39,415	1/1:2,21:23:56.72:560,57,0	0/0:31,0:31:87.28:0,87,1094	0/0:33,0:33:93.30:0,93,1170	1/1:4,28:32:81.14:811,81,0	0/0:21,0:21:60.14:0,60,713	1/1:3,23:26:69.09:675,69,0	1/1:4,28:32:80.77:805,81,0	1/1:2,17:19:48.11:490,48,0	1/1:2,27:29:75.13:754,75,0	0/0:22,0:22:66.20:0,66,817	1/1:1,22:23:60.14:612,60,0	1/1:3,23:26:66.15:673,66,0	0/0:18,0:18:48.13:0,48,588	0/0:14,0:14:42.08:0,42,497	1/1:2,16:18:48.10:483,48,0	1/1:3,23:26:66.15:673,66,0	1/1:2,17:19:51.11:520,51,0	1/1:2,16:18:45.10:459,45,0	1/1:2,16:18:45.10:459,45,0	1/1:3,24:27:72.16:734,72,0	1/1:2,22:24:66.15:673,66,0	0/0:21,0:21:60.18:0,60,744	1/1:1,21:22:57.13:581,57,0	0/0:8,0:8:18.06:0,18,226
chr10	78591028	.	C	CTG	15842.15	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-11.329;DP=561;FS=12.791;HRun=0;HaplotypeScore=63.4510;InbreedingCoeff=0.9966;MQ=85.15;MQ0=1;MQRankSum=-0.913;QD=45.39;ReadPosRankSum=1.595;VQSLOD=5.3779;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1397	1/1:2,6:8:15.05:275,15,0	0/0:17,0:16:29.74:0,30,374	0/0:22,0:21:23.16:0,23,654	1/1:2,18:20:60.20:1008,60,0	0/0:21,0:21:60.13:0,60,779	0/0:20,0:20:54.17:0,54,755	1/1:0,24:25:75.21:1285,75,0	0/0:15,0:15:45.14:0,45,620	1/1:0,25:25:75.25:1315,75,0	1/1:0,13:13:30.10:526,30,0	1/1:0,12:12:24.08:439,24,0	1/1:1,22:23:63.22:1153,63,0	0/0:16,0:16:45.14:0,45,626	1/1:0,22:22:48.16:877,48,0	1/1:0,17:17:41.94:769,42,0	0/0:27,0:27:72.24:0,72,1028	0/0:20,0:20:60.20:0,60,858	1/1:2,21:23:63.12:1023,63,0	1/1:2,20:22:57.20:1040,57,0	1/1:2,24:25:54.19:985,54,0	1/1:0,20:20:51.17:932,51,0	1/1:1,18:19:48.16:879,48,0	1/1:0,26:26:63.22:1154,63,0	1/1:3,21:24:54.19:986,54,0	0/0:13,0:13:39.12:0,39,528	1/1:1,22:24:66.23:1195,66,0	0/0:8,0:8:24.08:0,24,344
chr10	78591365	.	TC	T	7632.78	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-3.481;DP=690;FS=1.129;HRun=10;HaplotypeScore=99.5288;InbreedingCoeff=0.9836;MQ=82.08;MQ0=3;MQRankSum=0.039;QD=17.55;ReadPosRankSum=4.252;VQSLOD=5.0862;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:61.85:0,62,624	1/1:0,13:14:38.03:318,38,0	0/0:43,0:28:36.17:0,36,290	0/0:47,2:29:19.38:0,19,170	1/1:0,19:20:55.86:447,56,0	0/0:12,0:12:35.99:0,36,360	0/0:27,0:27:58.28:0,58,587	1/1:11,23:34:68.35:576,68,0	0/0:12,0:12:33.07:0,33,352	1/1:3,20:23:45.56:475,46,0	1/1:6,11:17:35.73:292,36,0	1/1:17,0:17:39.77:191,40,0	1/1:19,0:18:31.20:149,31,0	0/0:28,1:29:37.59:0,38,604	1/1:4,22:26:41.99:365,42,0	1/1:4,31:35:44.81:616,45,0	0/0:28,0:28:81.09:0,81,863	0/0:17,0:17:6.48:0,6,86	1/1:4,17:21:53.79:448,54,0	1/1:5,21:26:56.83:477,57,0	1/1:0,15:15:26.99:234,27,0	1/1:26,0:26:61.99:317,62,0	1/1:20,0:20:45.03:217,45,0	1/1:22,0:22:48.19:230,48,0	1/1:4,21:25:56.97:494,57,0	1/1:1,23:24:68.96:594,69,0	1/1:0,31:31:86.98:755,87,0	1/1:2,18:20:50.97:439,51,0
chr10	78591374	.	CCA	C	3443.62	PASS	AB=0.992;AC=16;AF=0.286;AN=56;BaseQRankSum=-8.459;DP=689;FS=3.899;HRun=0;HaplotypeScore=126.3270;InbreedingCoeff=0.5061;MQ=80.65;MQ0=3;MQRankSum=1.161;QD=13.56;ReadPosRankSum=-1.836;VQSLOD=3.1480;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:19.83:20,0,389	0/0:15,0:15:28.06:0,28,131	0/0:45,0:28:54.34:0,54,571	0/0:49,0:28:34.24:0,34,327	0/1:22,0:22:27.06:27,0,131	0/1:17,0:17:56.50:56,0,218	0/1:26,0:26:1.35:1,0,357	0/1:30,0:30:7.87:8,0,276	0/0:16,0:16:48.07:0,48,692	0/0:26,0:26:21.27:0,21,260	0/0:14,0:14:9.15:0,9,96	1/1:0,15:15:42.14:596,42,0	1/1:0,20:19:33.10:467,33,0	0/0:27,0:27:77.75:0,78,1153	0/0:23,0:23:39.21:0,39,158	0/0:35,0:35:73.96:0,74,343	0/0:30,0:30:90.24:0,90,1504	0/0:18,0:18:40.93:0,41,365	0/1:20,1:21:30.11:30,0,163	0/0:24,0:24:39.89:0,40,218	0/0:15,0:15:23.37:0,23,86	1/1:1,29:30:65.02:837,65,0	1/1:0,20:20:48.06:680,48,0	1/1:0,19:19:51.17:721,51,0	0/0:23,0:23:52.23:0,52,207	0/0:24,0:24:41.82:0,42,217	0/0:32,0:32:77.11:0,77,297	0/0:19,0:19:41.44:0,41,153
chr10	78591375	.	CA	C	1453.94	PASS	AB=0.989;AC=24;AF=0.429;AN=56;BaseQRankSum=5.974;DP=694;FS=23.426;HRun=8;HaplotypeScore=122.5478;InbreedingCoeff=0.2489;MQ=80.50;MQ0=3;MQRankSum=-1.828;QD=3.82;ReadPosRankSum=4.130;VQSLOD=-0.0863;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,3:35:39.40:123,0,39	0/1:15,0:15:8.38:8,0,30	0/0:45,0:28:36.94:0,37,309	0/0:48,1:28:19.82:0,20,204	0/1:22,0:22:19.52:20,0,53	0/1:17,0:17:37.66:72,0,38	0/1:27,1:28:43.57:81,0,44	0/0:30,0:30:18.06:0,18,180	0/0:17,0:17:48.05:0,48,491	0/1:26,0:26:2.43:2,0,133	0/0:15,0:15:2.23:0,2,36	1/1:15,0:15:40.83:231,41,0	1/1:20,0:19:31.63:180,32,0	0/0:26,0:26:58.59:0,59,694	0/0:23,0:23:0.38:0,0,22	0/0:35,0:35:12.35:0,12,91	0/0:30,0:30:84.19:0,84,947	0/0:18,0:18:50.27:0,50,521	0/1:21,0:21:5.01:5,0,74	0/1:24,0:24:12.09:12,0,51	1/1:15,0:15:4.21:13,4,0	1/1:30,0:30:52.55:297,53,0	1/1:20,0:20:46.35:263,46,0	1/1:19,0:19:49.56:279,50,0	0/1:23,0:23:4.22:4,0,24	0/0:25,0:25:14.43:0,14,75	0/1:32,0:32:13.59:26,0,14	1/1:19,0:19:8.29:20,8,0
chr10	78591619	.	G	GTAGAGT	3636.69	PASS	AB=0.855;AC=13;AF=0.232;AN=56;BaseQRankSum=13.167;DP=691;FS=9.699;HRun=0;HaplotypeScore=208.5953;InbreedingCoeff=-0.1253;MQ=69.44;MQ0=0;MQRankSum=-6.703;QD=15.48;ReadPosRankSum=-6.748;VQSLOD=-0.1623;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:67,0:67:99:0,196,4552	0/1:5,5:10:99:408,0,119	0/0:9,0:9:18.05:0,18,355	0/0:13,0:13:34.95:0,35,499	1/1:8,2:10:7.84:139,8,0	0/0:22,0:22:66.21:0,66,1609	0/0:33,0:33:93.26:0,93,2109	0/1:33,0:33:99:111,0,818	0/0:38,0:38:99:0,114,2705	0/1:18,2:20:99:306,0,323	0/1:12,2:14:98.75:150,0,99	0/0:32,0:32:96.22:0,96,1958	0/0:35,0:35:99:0,105,2397	0/0:25,0:25:72.21:0,72,1639	0/1:21,9:30:99:769,0,596	0/1:18,7:25:99:552,0,436	0/0:28,0:28:81.23:0,81,1912	0/0:25,0:25:69.15:0,69,1473	0/1:16,0:16:78.79:79,0,197	0/1:21,4:25:99:347,0,279	0/1:15,1:16:74.63:114,0,75	0/0:19,0:19:54.14:0,54,1227	0/0:16,0:16:48.08:0,48,1039	0/0:49,0:49:99:0,147,3193	0/1:17,3:20:99:229,0,431	0/0:33,0:33:96.31:0,96,2283	0/1:10,6:16:99:433,0,197	0/0:12,0:12:36.12:0,36,892
chr10	78591623	.	A	ATTCAGGCCGTT	15829.32	PASS	AB=0.888;AC=13;AF=0.232;AN=56;BaseQRankSum=13.474;DP=765;FS=17.306;HRun=0;HaplotypeScore=307.2526;InbreedingCoeff=-0.3024;MQ=68.93;MQ0=0;MQRankSum=-14.288;QD=46.42;ReadPosRankSum=-2.513;VQSLOD=3.1789;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:70,0:70:99:0,205,6893	0/1:6,5:11:99:1016,0,253	0/0:11,0:11:27.02:0,27,615	0/0:14,0:15:27.83:0,28,838	0/1:14,2:16:99:853,0,318	0/0:22,0:22:66.23:0,66,2384	0/0:32,0:32:93.31:0,93,3207	0/1:46,0:46:99:1507,0,2325	0/0:38,0:38:99:0,114,3957	0/1:27,2:29:99:1662,0,865	0/1:16,2:18:99:845,0,493	0/0:31,0:31:93.26:0,93,2974	0/0:34,0:34:99:0,99,3502	0/0:25,0:25:75.24:0,75,2541	0/1:25,9:34:99:1727,0,1510	0/1:29,7:36:99:2458,0,1312	0/0:28,0:28:84.24:0,84,2799	0/0:25,0:25:69.18:0,69,2254	0/1:23,0:23:99:777,0,597	0/1:27,4:31:99:1347,0,1033	0/1:18,1:19:99:774,0,261	0/0:18,0:18:54.17:0,54,1813	0/0:16,0:16:48.15:0,48,1577	0/0:46,0:46:99:0,135,4679	0/1:22,3:25:99:1521,0,1165	0/1:33,0:33:49.93:50,0,3303	0/1:14,6:20:99:1292,0,563	0/0:13,0:13:36.12:0,36,1299
chr10	78591968	.	TG	T	5149.57	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=16.375;DP=621;FS=6.861;HRun=8;HaplotypeScore=111.4497;InbreedingCoeff=0.9970;MQ=76.19;MQ0=0;MQRankSum=-10.450;QD=23.30;ReadPosRankSum=-2.429;VQSLOD=3.3993;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,135,1562	1/1:2,6:8:14.97:135,15,0	0/0:27,0:27:79.20:0,79,858	0/0:15,0:15:21.22:0,21,339	1/1:2,24:26:62.48:522,62,0	0/0:31,0:31:90.24:0,90,1052	0/0:25,0:25:69.20:0,69,822	1/1:9,17:26:57.07:546,57,0	0/0:29,0:29:84.26:0,84,1012	1/1:3,19:22:60.05:569,60,0	1/1:1,13:14:35.91:318,36,0	0/0:16,0:16:45.12:0,45,530	0/0:16,0:16:47.80:0,48,542	0/0:21,0:21:54.17:0,54,652	1/1:7,14:21:57.03:538,57,0	1/1:3,22:25:63.10:605,63,0	0/0:31,0:31:87.27:0,87,1050	0/0:13,0:13:36.11:0,36,434	1/1:1,11:12:30.05:289,30,0	1/1:5,16:21:54.04:511,54,0	1/1:3,13:16:42.02:395,42,0	0/0:25,0:25:63.17:0,63,737	0/0:25,0:25:69.20:0,69,821	0/0:31,0:31:84.21:0,84,978	1/1:2,10:12:29.93:267,30,0	0/0:30,1:31:81.24:0,81,968	1/1:1,17:18:48.04:454,48,0	0/0:16,0:16:47.50:0,47,540
chr10	78592033	.	C	CT	10081	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=19.855;DP=655;FS=10.195;HRun=1;HaplotypeScore=132.5448;InbreedingCoeff=0.9977;MQ=72.90;MQ0=0;MQRankSum=-11.930;QD=38.92;ReadPosRankSum=-0.483;VQSLOD=2.9264;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.30:0,93,1206	1/1:0,7:7:18.06:268,18,0	0/0:30,0:30:87.26:0,87,1083	0/0:17,0:17:51.13:0,51,635	1/1:0,25:25:60.16:872,60,0	0/0:24,0:24:66.20:0,66,843	0/0:18,0:18:51.14:0,51,636	1/1:2,28:30:87.25:1278,87,0	0/0:26,0:26:78.20:0,78,955	1/1:3,25:29:81.27:1204,81,0	1/1:1,27:28:78.22:1141,78,0	0/0:13,0:13:39.13:0,39,506	0/0:20,0:20:60.19:0,60,777	0/0:23,0:23:66.20:0,66,842	1/1:3,16:19:45.15:673,45,0	1/1:1,22:23:63.18:918,63,0	0/0:33,0:33:93.29:0,93,1192	0/0:15,0:15:45.11:0,45,562	1/1:2,19:21:57.19:837,57,0	1/1:1,19:20:51.13:737,51,0	1/1:2,10:12:30.10:449,30,0	0/0:33,0:33:99:0,99,1270	0/0:27,0:27:78.25:0,78,1011	0/0:42,0:42:99:0,126,1615	1/1:2,21:23:60.20:897,60,0	0/0:35,1:36:60.37:0,60,1279	1/1:0,22:22:54.18:806,54,0	0/0:6,0:6:18.06:0,18,233
chr10	78592597	.	G	GA	106.49	PASS	AC=14;AF=0.700;AN=20;BaseQRankSum=-1.600;DP=21;FS=16.782;HRun=0;HaplotypeScore=12.4349;InbreedingCoeff=0.3642;MQ=28.02;MQ0=1;MQRankSum=-0.133;QD=8.19;ReadPosRankSum=2.000;VQSLOD=1.5645;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	0/0:2,0:2:2.66:0,3,14	1/1:2,1:3:5.94:41,6,0	./.	1/1:3,0:2:2.51:7,3,0	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:39,3,0	./.	./.	1/1:1,0:1:3.01:33,3,0	./.	1/1:0,3:3:2.95:19,3,0	./.	0/0:1,0:1:2.88:0,3,15	./.	1/1:0,1:1:2.98:22,3,0	0/0:3,0:3:8.71:0,9,49	1/1:0,1:1:3.01:38,3,0	./.
chr10	78592698	.	AG	A	1326.67	PASS	AB=1.000;AC=23;AF=0.500;AN=46;BaseQRankSum=1.590;DP=109;FS=16.732;HRun=7;HaplotypeScore=22.4953;InbreedingCoeff=0.6428;MQ=93.78;MQ0=2;MQRankSum=-2.155;QD=19.23;ReadPosRankSum=1.784;VQSLOD=1.7161;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:5.95:0,6,55	./.	0/0:17,0:8:12.01:0,12,108	0/1:12,0:5:16.65:17,0,31	1/1:2,5:7:17.88:151,18,0	0/0:2,0:2:5.99:0,6,48	0/0:2,0:2:6.02:0,6,74	1/1:0,11:11:33.07:336,33,0	./.	1/1:3,3:6:14.96:132,15,0	1/1:0,2:2:5.97:50,6,0	./.	0/0:1,0:1:3.01:0,3,38	0/0:1,0:1:3.01:0,3,38	1/1:1,6:6:18:172,18,0	1/1:0,3:3:9.02:91,9,0	0/0:2,0:2:6.02:0,6,76	0/0:3,0:3:8.94:0,9,78	1/1:1,5:6:18.03:177,18,0	1/1:0,4:4:11.98:110,12,0	1/1:0,3:3:8.95:79,9,0	./.	0/0:1,0:1:3.01:0,3,37	./.	1/1:0,5:5:9.02:91,9,0	0/0:6,0:6:18.05:0,18,211	1/1:0,3:3:9.02:92,9,0	0/0:1,0:1:3.01:0,3,37
chr10	78592846	.	T	TAC	5964.21	PASS	AB=0.733;AC=33;AF=0.589;AN=56;BaseQRankSum=-2.998;DP=321;FS=4.828;HRun=0;HaplotypeScore=40.8655;InbreedingCoeff=0.7521;MQ=62.90;MQ0=0;MQRankSum=0.765;QD=33.32;ReadPosRankSum=-0.305;VQSLOD=6.0839;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:36.11:0,36,449	1/1:2,3:5:9.03:149,9,0	0/0:15,0:11:25.26:0,25,307	0/1:6,0:5:0.58:1,0,42	1/1:0,12:12:30.10:495,30,0	0/0:14,0:14:27.09:0,27,337	0/0:4,0:4:12.04:0,12,150	1/1:14,17:32:17.05:719,17,0	0/0:10,0:8:24.08:0,24,300	1/1:2,13:16:45.13:680,45,0	0/1:3,6:9:10.47:329,0,10	1/1:0,4:4:9.03:149,9,0	1/1:2,8:11:23.83:392,24,0	0/0:5,0:5:12.02:0,12,137	1/1:2,10:12:27.09:446,27,0	1/1:1,2:3:6.02:99,6,0	0/0:25,0:26:63.03:0,63,764	0/0:22,0:22:54.12:0,54,644	1/1:2,14:16:42.11:642,42,0	1/1:0,3:3:6.02:99,6,0	1/1:1,5:6:12.04:198,12,0	1/1:0,5:5:12.04:198,12,0	1/1:2,5:7:12.04:198,12,0	0/1:2,4:6:22.46:181,0,22	1/1:0,10:10:27.09:446,27,0	0/0:14,0:14:36.10:0,36,437	1/1:3,11:14:33.11:545,33,0	0/0:13,0:13:27.09:0,27,337
chr10	78592963	.	AAAAAAGAAAG	A	4529	PASS	AB=0.969;AC=21;AF=0.375;AN=56;BaseQRankSum=8.567;DP=444;FS=4.920;HRun=0;HaplotypeScore=143.5309;InbreedingCoeff=0.6076;MQ=59.87;MQ0=10;MQRankSum=-7.963;QD=25.59;ReadPosRankSum=-0.679;VQSLOD=4.1058;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:42.14:0,42,1107	0/1:6,0:6:16.81:66,0,17	0/0:25,0:7:17.99:0,18,171	0/0:21,0:11:13.98:0,14,112	1/1:7,2:9:20.40:331,20,0	0/0:23,0:22:51.04:0,51,1179	0/0:14,0:12:27.09:0,27,798	1/1:25,3:26:49.79:850,50,0	0/0:21,0:19:26.61:0,27,1266	1/1:14,2:16:18.11:527,18,0	1/1:10,3:13:21.68:356,22,0	0/1:11,0:11:10.29:10,0,343	0/0:12,0:12:5.49:0,5,670	0/0:10,0:10:26.86:0,27,623	1/1:10,2:12:12.85:379,13,0	1/1:10,1:10:17.95:322,18,0	0/0:29,0:29:81.13:0,81,2548	0/0:19,0:19:57.15:0,57,1922	1/1:17,0:16:20.66:335,21,0	1/1:13,5:17:27.70:624,28,0	0/1:9,0:7:3.27:3,0,11	0/0:10,0:10:27.92:0,28,739	0/0:9,0:9:3.01:0,3,79	0/0:28,0:27:43.98:0,44,1725	0/1:9,2:11:9.56:390,0,10	0/0:21,0:21:40.66:0,41,941	0/1:16,0:16:27.98:335,0,28	0/0:7,0:7:17.85:0,18,471
chr10	78592994	.	T	TAA	8314.63	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=11.720;DP=423;FS=2.892;HRun=2;HaplotypeScore=84.5606;InbreedingCoeff=0.9703;MQ=68.43;MQ0=0;MQRankSum=-9.527;QD=46.19;ReadPosRankSum=-3.320;VQSLOD=3.8279;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.16:0,48,706	1/1:2,4:6:9.03:168,9,0	0/0:22,0:15:18.09:0,18,397	0/0:20,0:11:4.58:0,5,226	1/1:0,19:19:54.11:932,54,0	0/0:18,0:18:48.16:0,48,699	0/0:7,0:7:21.07:0,21,300	1/1:6,22:29:75.06:1226,75,0	0/0:12,0:12:36.11:0,36,501	1/1:4,10:14:39.11:692,39,0	1/1:0,12:12:36.11:642,36,0	0/0:10,0:10:30.09:0,30,422	0/0:15,0:15:39.11:0,39,574	0/0:11,0:11:33.10:0,33,466	1/1:2,17:21:48.60:850,49,0	1/1:1,10:11:26.85:504,27,0	0/0:22,0:22:66.20:0,66,944	0/0:14,0:14:36.12:0,36,509	1/1:2,17:19:54.13:946,54,0	1/1:2,9:11:33.06:549,33,0	1/1:0,13:12:30.10:559,30,0	0/0:16,0:16:48.13:0,48,683	0/0:8,0:8:24.07:0,24,334	0/0:22,0:22:59.71:0,60,878	1/1:2,8:10:30.06:516,30,0	0/0:19,0:19:57.18:0,57,814	1/1:1,13:14:39.13:730,39,0	0/0:9,0:9:23.91:0,24,353
chr10	78593464	.	A	AG	8965.72	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=14.791;DP=551;FS=3.785;HRun=0;HaplotypeScore=93.7319;InbreedingCoeff=0.9987;MQ=73.60;MQ0=0;MQRankSum=-1.741;QD=35.58;ReadPosRankSum=1.183;VQSLOD=4.5159;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.20:0,63,863	1/1:0,13:13:33.11:459,33,0	0/0:26,0:24:63.31:0,63,637	0/0:10,0:10:20.80:0,21,218	1/1:0,23:23:65.99:847,66,0	0/0:27,0:27:77.81:0,78,980	0/0:18,0:18:54.15:0,54,707	1/1:1,28:29:81.17:1013,81,0	0/0:15,0:15:42.12:0,42,555	1/1:1,24:25:72.17:948,72,0	1/1:1,13:14:36.11:502,36,0	0/0:16,0:16:48.15:0,48,656	0/0:15,0:15:45.08:0,45,588	0/0:19,0:19:54.14:0,54,691	1/1:0,24:24:54.18:753,54,0	1/1:1,23:24:24.35:836,24,0	0/0:22,0:22:66.14:0,66,865	0/0:30,0:30:90.19:0,90,1175	1/1:3,19:22:57.11:725,57,0	1/1:0,23:23:66.22:908,66,0	1/1:2,13:15:45.12:594,45,0	0/0:16,0:16:42.69:0,43,606	0/0:24,0:24:72.21:0,72,947	0/0:10,0:10:29.11:0,29,366	1/1:0,22:22:57.19:794,57,0	0/0:21,0:21:36.20:0,36,780	1/1:0,18:17:42.14:586,42,0	0/0:8,0:8:24.07:0,24,318
chr10	78593623	.	C	CA	9044.64	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-6.488;DP=458;FS=6.570;HRun=8;HaplotypeScore=47.0982;InbreedingCoeff=0.9774;MQ=73.06;MQ0=0;MQRankSum=-0.359;QD=28.35;ReadPosRankSum=0.783;VQSLOD=5.2371;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:23:51.08:561,51,0	1/1:2,2:4:6.02:69,6,0	0/0:8,0:8:12:0,12,109	0/0:10,0:9:16.99:0,17,147	1/1:5,23:29:55.83:729,56,0	1/1:6,21:26:57.14:645,57,0	1/1:0,14:14:36.11:416,36,0	1/1:6,28:33:81.17:900,81,0	0/0:10,0:10:27:0,27,242	1/1:2,27:29:81.21:921,81,0	1/1:2,17:19:51.15:589,51,0	0/0:13,0:13:33.01:0,33,302	0/0:15,0:16:44.06:0,44,390	0/0:15,1:16:44.06:0,44,390	1/1:1,14:15:42.12:485,42,0	1/1:0,10:10:27.08:312,27,0	0/0:12,0:12:33.01:0,33,302	0/0:19,0:19:40.52:0,41,382	1/1:2,13:15:39.12:450,39,0	1/1:2,22:24:60.14:678,60,0	1/1:0,10:10:30.09:346,30,0	0/0:14,0:14:32.95:0,33,290	0/0:14,0:14:39.02:0,39,357	0/0:7,0:7:18.01:0,18,165	1/1:0,18:18:48.14:554,48,0	1/1:4,16:20:48.14:554,48,0	1/1:3,14:17:45.10:502,45,0	1/1:1,10:11:30.07:336,30,0
chr10	78594338	.	AAGGG	A	2880.48	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=8.108;DP=543;FS=14.161;HRun=0;HaplotypeScore=100.6344;InbreedingCoeff=0.9226;MQ=54.40;MQ0=26;MQRankSum=-1.190;QD=15.83;ReadPosRankSum=-0.766;VQSLOD=2.4019;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:92.45:0,92,2189	1/1:7,0:7:15.82:121,16,0	0/0:15,0:9:26.77:0,27,367	0/0:15,0:9:27.07:0,27,479	1/1:17,0:17:41.38:402,41,0	0/0:22,0:18:54.18:0,54,1188	0/0:32,0:28:51.41:0,51,1444	1/1:4,15:17:43.95:334,44,0	0/0:28,0:29:76.74:0,77,1517	1/1:22,0:20:42.55:413,43,0	1/1:16,0:16:41.70:337,42,0	0/0:25,0:25:75.23:0,75,1709	0/0:15,0:15:42.07:0,42,771	0/0:15,0:14:39.10:0,39,808	1/1:15,0:13:16.89:237,17,0	1/1:14,0:12:35.96:311,36,0	0/0:34,0:31:84.12:0,84,1630	0/0:20,0:19:27.37:0,27,976	1/1:16,0:14:29.34:238,29,0	1/1:13,0:13:20.80:156,21,0	0/1:23,0:18:10.38:255,0,10	0/0:16,0:16:27.08:0,27,836	0/0:29,0:29:81.25:0,81,1824	0/0:23,1:24:46.33:0,46,1110	1/1:12,0:11:22.67:199,23,0	0/0:21,0:19:32.03:0,32,974	1/1:8,0:5:11.99:102,12,0	0/0:9,0:9:24.04:0,24,387
chr10	78594354	.	AAGGG	A	2340.17	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=10.006;DP=495;FS=25.266;HRun=0;HaplotypeScore=91.9240;InbreedingCoeff=0.7318;MQ=51.68;MQ0=43;MQRankSum=-2.123;QD=9.67;ReadPosRankSum=-4.887;VQSLOD=-0.4029;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:37:25.41:25,0,550	1/1:5,0:5:9.46:78,9,0	0/0:8,0:4:8.92:0,9,70	0/0:12,0:6:9:0,9,88	1/1:15,0:14:34.44:303,34,0	0/0:22,0:18:47.84:0,48,393	0/0:33,0:24:25.06:0,25,427	1/1:18,0:14:32.69:240,33,0	0/0:21,0:21:49.52:0,50,508	1/1:24,0:19:43.43:375,43,0	1/1:12,0:11:26.87:214,27,0	0/0:25,0:24:66.92:0,67,692	0/0:16,0:16:42.20:0,42,385	0/1:16,0:15:4.38:4,0,419	1/1:17,0:14:31.90:261,32,0	1/1:11,0:9:26.96:231,27,0	0/0:30,0:27:50.81:0,51,559	0/0:19,0:16:1.05:0,1,250	1/1:8,0:6:9:81,9,0	1/1:2,9:11:14.84:105,15,0	1/1:25,0:20:28.41:315,28,0	0/0:11,0:11:32.82:0,33,268	0/0:26,0:26:62.95:0,63,534	0/0:24,0:21:10.13:0,10,348	1/1:14,0:12:26.50:218,26,0	0/1:20,0:17:10.50:10,0,260	1/1:8,0:5:11.94:93,12,0	0/0:6,0:6:14.98:0,15,127
chr10	78594964	.	CTTCT	C	11359.64	PASS	AB=0.941;AC=26;AF=0.464;AN=56;BaseQRankSum=17.521;DP=516;FS=11.313;HRun=0;HaplotypeScore=129.8354;InbreedingCoeff=0.8686;MQ=73.88;MQ0=0;MQRankSum=-14.478;QD=41.16;ReadPosRankSum=-1.337;VQSLOD=4.1880;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,2460	1/1:0,11:11:33.11:658,33,0	0/0:9,0:9:18.06:0,18,409	0/0:21,0:21:54.15:0,54,1190	1/1:1,28:29:69.24:1336,69,0	0/0:16,0:16:45.58:0,46,1072	0/0:16,0:16:45.15:0,45,1080	1/1:4,34:38:99:1972,99,0	0/1:17,1:18:5.68:6,0,1375	1/1:2,16:18:42.14:814,42,0	1/1:1,18:19:54.19:1075,54,0	0/0:19,0:19:54.19:0,54,1466	0/0:9,0:9:27.09:0,27,754	0/0:15,0:15:42.14:0,42,1175	1/1:0,23:23:57.20:1137,57,0	1/1:1,12:13:21.07:419,21,0	0/0:29,0:29:84.29:0,84,2350	0/0:13,0:13:39.12:0,39,1031	1/1:1,11:12:27.06:500,27,0	1/1:1,16:17:45.15:897,45,0	1/1:0,23:23:58.44:1133,58,0	0/0:11,0:11:33.11:0,33,924	0/0:14,0:14:42.14:0,42,1174	0/0:23,0:23:69.24:0,69,1931	1/1:0,15:15:45.15:897,45,0	0/1:27,2:29:35.49:35,0,2010	1/1:1,10:11:24.08:479,24,0	0/0:10,0:10:20.74:0,21,587
chr10	78595538	.	CATGAAGACTCCTGCTA	C	17678.24	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=17.240;DP=602;FS=33.115;HRun=0;HaplotypeScore=280.8455;InbreedingCoeff=0.9760;MQ=96.58;MQ0=0;MQRankSum=-16.612;QD=88.84;ReadPosRankSum=5.334;VQSLOD=3.2637;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,6179	1/1:1,3:4:9.03:422,9,0	0/0:35,0:35:96.32:0,96,5435	0/0:33,0:33:87.27:0,87,5795	1/1:0,21:21:39.13:1818,39,0	0/0:37,0:37:99:0,111,7031	0/0:26,0:26:78.19:0,78,5009	1/1:2,12:14:36.12:691,36,0	0/0:24,0:24:69.24:0,69,5010	1/1:3,20:23:63.19:2730,63,0	1/1:3,20:23:42.14:1970,42,0	0/0:26,0:26:78.27:0,78,5748	0/0:28,0:28:75.26:0,75,5534	0/0:21,0:21:60.19:0,60,3950	1/1:1,16:17:36.12:1689,36,0	1/1:1,13:14:33.11:1548,33,0	0/0:21,0:21:57.11:0,57,3586	0/0:20,0:20:57.16:0,57,3556	1/1:1,8:9:21.04:597,21,0	1/1:1,29:30:63.17:2835,63,0	1/1:2,5:7:6.02:282,6,0	0/0:27,0:27:78.26:0,78,5711	0/0:28,0:28:78.27:0,78,5705	0/0:13,0:13:39.13:0,39,2809	1/1:4,16:20:36.12:1689,36,0	0/0:22,0:22:66.21:0,66,4576	1/1:1,16:17:30.10:1408,30,0	0/0:9,0:9:21.54:0,22,1049
chr10	78597751	.	TCG	T	4810.05	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-1.113;DP=544;FS=47.951;HRun=0;HaplotypeScore=63.1979;InbreedingCoeff=0.7498;MQ=73.31;MQ0=28;MQRankSum=-1.841;QD=14.53;ReadPosRankSum=-0.597;VQSLOD=2.5818;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:26:0.68:14,1,0	1/1:3,0:3:8.99:74,9,0	0/0:50,0:14:16.24:0,16,177	0/0:65,0:27:53.02:0,53,431	1/1:16,0:15:21.11:196,21,0	0/0:8,0:8:2.68:0,3,11	1/1:25,0:25:2.53:19,3,0	1/1:31,0:31:71.94:638,72,0	0/0:24,0:24:28.76:0,29,253	1/1:18,0:18:41.75:351,42,0	1/1:5,0:5:8.74:62,9,0	1/1:18,0:17:34.55:285,35,0	1/1:15,0:15:37.52:304,38,0	0/0:23,0:23:55.01:0,55,375	1/1:14,0:14:37.16:299,37,0	1/1:17,0:17:29.06:330,29,0	0/0:29,0:27:46.68:0,47,388	0/0:14,0:14:39.77:0,40,278	1/1:12,0:11:27.02:245,27,0	1/1:1,8:9:2.84:14,3,0	1/1:31,0:31:64.69:512,65,0	1/1:8,0:8:17.82:138,18,0	1/1:9,0:9:14.94:118,15,0	1/1:19,0:19:30.75:337,31,0	0/1:16,0:16:12.51:179,0,13	1/1:8,0:7:16.60:141,17,0	1/1:18,0:18:8.63:314,9,0	1/1:11,0:10:29.93:241,30,0
chr10	78597755	.	GCT	G	31.84	PASS	AB=1.000;AC=11;AF=0.212;AN=52;BaseQRankSum=-0.212;DP=623;FS=5.642;HRun=0;HaplotypeScore=93.1148;InbreedingCoeff=0.4428;MQ=63.37;MQ0=36;MQRankSum=1.260;QD=0.26;ReadPosRankSum=0.011;VQSLOD=1.4306;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:32:6:0,6,52	./.	./.	0/0:61,0:23:0.94:0,1,2	0/0:18,0:17:5.98:0,6,50	0/0:10,0:10:2.92:0,3,17	0/0:25,0:25:8.94:0,9,83	0/0:34,0:33:19.11:0,19,129	1/1:17,6:23:3.01:32,3,0	0/0:19,0:18:8.92:0,9,66	1/1:12,0:12:0.30:1,0,0	0/0:20,0:19:8.83:0,9,55	0/0:14,0:14:2.97:0,3,20	1/1:25,0:25:0.47:1,0,0	0/0:23,0:23:4.84:0,5,28	0/0:19,0:19:6:0,6,64	1/1:24,7:29:6.01:65,6,0	1/1:15,0:15:5.88:38,6,0	0/0:15,0:14:8.93:0,9,63	0/0:13,0:12:2.37:0,2,8	0/0:36,0:35:8.48:0,8,57	0/1:15,0:15:1.03:9,0,1	0/0:12,0:11:5.34:0,5,31	0/0:24,0:24:3.01:0,3,41	0/0:19,0:19:17.59:0,18,191	0/0:19,0:17:26.78:0,27,192	0/0:20,0:20:13.25:0,13,122	0/0:15,0:12:8.92:0,9,62
chr10	78597800	.	C	CCT	546.58	PASS	AB=0.714;AC=9;AF=0.161;AN=56;BaseQRankSum=3.463;DP=487;FS=0.897;HRun=0;HaplotypeScore=74.2379;InbreedingCoeff=0.4973;MQ=53.80;MQ0=33;MQRankSum=1.670;QD=6.92;ReadPosRankSum=-1.131;VQSLOD=3.0373;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:39.01:0,39,496	0/0:2,0:2:5.98:0,6,64	0/0:43,0:11:15.37:0,15,275	0/0:51,0:13:13.37:0,13,271	0/0:12,0:12:20.80:0,21,251	0/0:10,0:9:20.99:0,21,285	0/0:18,0:17:38.81:0,39,495	0/0:27,0:24:55.47:0,55,598	0/0:17,0:17:36.07:0,36,478	0/0:10,0:9:21.47:0,21,277	0/0:16,0:15:22.20:0,22,356	0/1:3,10:13:10.89:99,0,11	1/1:1,6:7:3.01:52,3,0	0/0:20,0:20:49.30:0,49,718	0/0:24,0:22:32.58:0,33,440	0/0:10,0:10:21.04:0,21,287	0/0:21,0:20:42.47:0,42,507	0/1:11,0:10:14.30:14,0,215	0/0:12,0:12:32.85:0,33,453	0/0:11,0:10:15.05:0,15,205	0/0:14,0:14:30.07:0,30,385	1/1:7,0:15:5.93:40,6,0	1/1:14,0:13:27.09:471,27,0	0/1:5,14:19:11.56:12,0,42	0/0:16,0:16:40.22:0,40,590	0/0:16,0:14:39.96:0,40,494	0/0:12,0:12:18.84:0,19,237	0/0:10,0:8:19.77:0,20,291
chr10	78599410	.	ATGCTCT	A	5063.04	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.585;DP=669;FS=0.000;HRun=0;HaplotypeScore=152.2261;InbreedingCoeff=0.9979;MQ=85.11;MQ0=1;MQRankSum=-13.263;QD=48.22;ReadPosRankSum=1.109;VQSLOD=4.9322;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.29:0,90,2983	0/0:10,0:10:27.09:0,27,878	0/0:22,0:22:51.17:0,51,1451	0/0:29,0:29:75.26:0,75,2430	0/0:27,0:27:72.25:0,72,2524	0/0:30,0:30:90.30:0,90,3075	0/0:19,0:19:57.20:0,57,1927	0/0:33,0:33:87.28:0,87,2841	0/0:23,0:23:66.23:0,66,2315	0/0:27,0:27:75.26:0,75,2623	0/0:18,0:18:51.18:0,51,1788	1/1:1,23:24:60.21:1382,60,0	1/1:1,19:20:45.15:1037,45,0	0/0:23,0:23:60.21:0,60,2069	0/0:25,0:25:72.23:0,72,2360	0/0:22,0:22:63.22:0,63,2138	0/0:17,0:17:51.18:0,51,1753	0/0:31,0:31:87.24:0,87,2846	0/0:29,0:28:81.28:0,81,2722	0/0:38,0:38:99:0,108,3657	0/0:18,0:18:48.16:0,48,1684	1/1:2,22:23:45.15:1037,45,0	1/1:2,22:23:53.74:1193,54,0	1/1:3,10:13:18.06:414,18,0	0/0:25,0:25:75.18:0,75,2249	0/0:24,0:24:72.23:0,72,2235	0/0:27,0:27:81.28:0,81,2808	0/0:16,0:16:39.13:0,39,1357
chr10	78600710	.	G	GCACA	10812.97	PASS	AB=0.832;AC=25;AF=0.446;AN=56;BaseQRankSum=4.985;DP=686;FS=1.569;HRun=0;HaplotypeScore=143.6508;InbreedingCoeff=0.7831;MQ=58.88;MQ0=1;MQRankSum=-3.315;QD=29.71;ReadPosRankSum=-0.387;VQSLOD=4.9024;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:40:93.29:0,93,1476	0/1:2,15:17:17.54:669,0,18	0/1:30,0:16:22.47:22,0,250	0/1:26,0:16:16:16,0,115	1/1:10,27:40:53.64:1218,54,0	0/0:18,0:19:45.15:0,45,737	0/0:19,0:19:27.56:0,28,446	1/1:13,21:36:68.65:1148,69,0	0/0:20,0:20:51.17:0,51,851	1/1:3,22:31:88.27:1756,88,0	1/1:1,18:22:26.61:504,27,0	0/0:19,0:22:57.14:0,57,834	0/0:18,0:18:30.09:0,30,483	0/0:19,0:19:48.09:0,48,725	1/1:2,7:10:15.05:373,15,0	1/1:2,19:23:45.15:1119,45,0	0/0:45,0:48:99:0,118,1857	0/0:23,0:26:63.19:0,63,963	1/1:1,11:16:44.91:758,45,0	1/1:10,17:29:38.78:850,39,0	1/1:16,25:43:41.88:925,42,0	0/0:16,0:18:45.13:0,45,689	0/0:24,0:24:66.22:0,66,1072	0/0:14,0:14:30.10:0,30,499	1/1:3,11:15:23.82:534,24,0	0/0:27,0:28:75.25:0,75,1228	1/1:6,16:23:41.67:920,42,0	0/0:7,0:7:21.07:0,21,346
chr10	78600870	.	G	GAA	6045.45	PASS	AB=0.779;AC=37;AF=0.661;AN=56;BaseQRankSum=0.326;DP=564;FS=7.495;HRun=12;HaplotypeScore=88.1769;InbreedingCoeff=0.7558;MQ=70.92;MQ0=1;MQRankSum=-0.021;QD=14.93;ReadPosRankSum=-1.581;VQSLOD=3.3238;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:47.91:0,48,437	1/1:3,5:8:9.45:105,9,0	0/1:19,0:14:33.99:34,0,65	0/0:13,0:13:9.02:0,9,64	1/1:5,20:30:53.38:716,53,0	0/0:19,0:21:32.80:0,33,351	0/0:16,0:19:41.45:0,41,356	1/1:8,19:31:41.26:717,41,0	0/0:18,0:21:25.82:0,26,387	1/1:18,5:24:16.18:375,16,0	1/1:8,8:17:20.03:168,20,0	1/1:4,0:17:21.60:79,22,0	1/1:5,0:14:14.97:52,15,0	0/0:15,0:15:40.66:0,41,349	1/1:1,13:14:12.04:161,12,0	1/1:2,20:22:42.14:589,42,0	0/0:21,0:22:44.24:0,44,441	0/0:20,0:21:28.33:0,28,311	1/1:3,12:17:41.52:476,42,0	1/1:12,24:37:59.56:1005,60,0	1/1:3,14:17:21.02:272,21,0	0/1:3,0:17:2.43:52,0,2	1/1:10,1:29:47.80:259,48,0	0/1:11,0:15:32.12:45,0,32	1/1:6,14:22:32.08:396,32,0	1/1:3,1:23:23.53:183,24,0	1/1:5,8:16:26.56:316,27,0	1/1:5,0:14:12.48:43,12,0
chr10	78601271	.	CT	C	2708.36	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=9.035;DP=666;FS=10.380;HRun=9;HaplotypeScore=91.4459;InbreedingCoeff=0.9334;MQ=71.22;MQ0=0;MQRankSum=0.162;QD=18.81;ReadPosRankSum=2.600;VQSLOD=3.3716;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:88.04:0,88,1334	0/0:7,0:7:21.05:0,21,234	0/1:13,0:13:0.16:0,0,199	0/0:12,0:9:13.96:0,14,141	0/0:34,0:34:93.26:0,93,1063	0/0:18,0:18:51.15:0,51,588	0/0:22,0:22:66.16:0,66,740	0/0:30,0:30:72.21:0,72,824	0/0:30,0:30:81.17:0,81,903	0/0:25,0:25:69.20:0,69,796	0/0:26,0:26:72.21:0,72,831	1/1:1,20:21:60.03:549,60,0	1/1:3,24:27:63.03:577,63,0	0/0:23,0:23:60.15:0,60,679	0/0:23,0:23:54.16:0,54,623	0/0:23,0:23:54.15:0,54,614	0/0:30,1:31:50.75:0,51,827	0/0:16,0:16:42.11:0,42,475	0/0:23,0:23:60.18:0,60,692	0/0:29,0:29:84.23:0,84,949	0/0:27,0:27:75.20:0,75,846	1/1:5,19:24:51.02:466,51,0	1/1:4,20:24:57.03:522,57,0	1/1:5,30:35:84.03:769,84,0	0/0:17,0:18:50.98:0,51,568	0/0:25,1:26:44.85:0,45,769	0/0:22,0:21:60.17:0,60,683	0/0:10,0:10:18.05:0,18,208
chr10	78601484	.	AAC	A	15969.33	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=16.953;DP=704;FS=0.609;HRun=0;HaplotypeScore=119.7476;InbreedingCoeff=0.9998;MQ=75.13;MQ0=2;MQRankSum=-2.115;QD=36.29;ReadPosRankSum=3.891;VQSLOD=7.0386;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.27:0,78,1395	1/1:0,11:11:33.06:478,33,0	0/0:31,0:25:72.77:0,73,1128	0/0:47,0:39:92.02:0,92,1364	1/1:1,19:20:57.15:842,57,0	0/0:32,0:32:96.31:0,96,1674	0/0:33,0:33:99:0,99,1715	1/1:0,38:38:99:1603,114,0	0/0:22,0:22:66.21:0,66,1150	1/1:2,33:35:99:1467,99,0	1/1:0,27:27:71.99:994,72,0	1/1:0,15:15:30.10:459,30,0	1/1:0,15:15:39.13:597,39,0	0/0:23,0:23:69.20:0,69,1162	1/1:1,32:33:78.26:1194,78,0	1/1:0,23:22:60.20:919,60,0	0/0:27,0:27:81.28:0,81,1480	0/0:23,0:23:69.21:0,69,1229	1/1:4,18:22:41.62:786,42,0	1/1:1,20:21:57.19:872,57,0	1/1:0,25:25:66.22:1010,66,0	1/1:0,22:22:63.17:938,63,0	1/1:0,14:14:39.13:597,39,0	1/1:0,34:34:93.29:1393,93,0	1/1:0,13:13:39.13:595,39,0	1/1:31,0:31:64.03:213,64,0	1/1:1,22:23:60.20:918,60,0	1/1:18,0:18:35.10:97,35,0
chr10	78601485	.	AC	A	8060.13	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=18.489;DP=699;FS=0.295;HRun=1;HaplotypeScore=132.7661;InbreedingCoeff=0.9998;MQ=75.60;MQ0=1;MQRankSum=-1.670;QD=18.57;ReadPosRankSum=3.961;VQSLOD=5.1909;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.26:0,78,1129	1/1:11,0:11:32.20:188,32,0	0/0:32,0:26:77.25:0,77,1016	0/0:45,1:39:74.70:0,75,1117	1/1:20,0:20:55.46:320,55,0	0/0:32,0:32:96.29:0,96,1362	0/0:33,0:33:99:0,99,1400	1/1:38,0:38:99:693,112,0	0/0:22,0:22:66.21:0,66,944	1/1:33,0:33:96.68:583,97,0	1/1:27,0:27:70.28:414,70,0	1/1:15,0:15:29.24:169,29,0	1/1:15,0:15:38.08:227,38,0	0/0:23,0:23:69.19:0,69,964	1/1:32,0:32:76.04:441,76,0	1/1:23,0:22:58.49:339,58,0	0/0:28,0:28:84.26:0,84,1205	0/0:23,0:23:69.21:0,69,982	1/1:21,0:21:52.38:315,52,0	1/1:20,0:20:55.57:322,56,0	1/1:25,0:25:64.34:373,64,0	1/1:22,0:22:61.46:359,61,0	1/1:14,0:14:38.02:220,38,0	1/1:34,0:34:90.75:532,91,0	1/1:13,0:13:37.97:218,38,0	1/1:0,31:31:93.30:1275,93,0	1/1:22,0:22:58.49:339,58,0	1/1:0,18:18:54.15:733,54,0
chr10	78602014	.	C	CTTTT	11333.57	PASS	AB=0.581;AC=33;AF=0.589;AN=56;BaseQRankSum=-1.025;DP=635;FS=1.951;HRun=10;HaplotypeScore=127.5281;InbreedingCoeff=0.9158;MQ=62.06;MQ0=1;MQRankSum=-4.945;QD=30.30;ReadPosRankSum=-5.011;VQSLOD=2.1111;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:52:99:0,126,1737	1/1:7,7:15:30.10:612,30,0	0/0:9,0:9:23.99:0,24,283	0/0:8,0:8:10.91:0,11,103	1/1:8,14:23:49.68:864,50,0	0/0:20,0:20:54.15:0,54,760	0/0:20,0:20:51.11:0,51,701	1/1:13,9:23:38.22:596,38,0	0/0:26,0:27:75.20:0,75,1033	1/1:11,10:23:51.14:879,51,0	1/1:10,15:26:51.06:767,51,0	1/1:4,0:21:45.09:533,45,0	1/1:6,0:21:30.01:337,30,0	0/0:23,0:23:63.12:0,63,849	1/1:4,10:15:26.64:543,27,0	0/1:5,12:18:41.02:729,0,41	0/0:35,0:36:90.14:0,90,1215	0/0:19,0:19:45.50:0,45,615	1/1:7,6:14:27.01:469,27,0	1/1:10,25:39:91.44:1631,91,0	1/1:1,9:13:24:498,24,0	1/1:9,0:28:51.13:520,51,0	1/1:5,0:23:36.03:425,36,0	1/1:6,0:15:18.44:202,18,0	1/1:3,20:25:34.93:701,35,0	0/0:4,0:27:26.01:0,26,65	1/1:4,25:30:47.81:1027,48,0	0/0:3,0:18:14.71:0,15,77
chr10	78602977	.	A	AAC	1600.96	PASS	AB=0.923;AC=9;AF=0.161;AN=56;BaseQRankSum=1.548;DP=584;FS=3.445;HRun=0;HaplotypeScore=137.5287;InbreedingCoeff=0.7140;MQ=67.76;MQ0=20;MQRankSum=-1.558;QD=16.01;ReadPosRankSum=-0.609;VQSLOD=3.6577;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:11.39:0,11,119	0/0:10,0:10:15.63:0,16,174	0/0:61,0:30:54.45:0,54,658	0/0:62,0:33:60.08:0,60,767	0/0:19,0:19:36.11:0,36,447	0/0:17,0:16:2.02:0,2,66	0/0:25,0:25:41.77:0,42,210	0/0:16,0:16:39.12:0,39,494	0/0:9,0:9:24.07:0,24,298	0/0:23,0:23:44.47:0,44,560	0/0:13,0:13:22.96:0,23,195	1/1:17,3:20:45.15:681,45,0	0/1:11,1:12:11.30:325,0,11	0/0:15,0:15:30.09:0,30,373	0/0:14,0:14:5.86:0,6,177	0/0:21,0:20:34.99:0,35,279	0/0:17,0:17:38.91:0,39,461	0/0:18,0:18:48.12:0,48,554	0/0:21,0:20:41.81:0,42,516	0/0:16,0:16:20.20:0,20,188	0/0:29,0:29:34.96:0,35,492	1/1:24,1:25:10.65:85,11,0	1/1:16,0:16:5.91:58,6,0	1/1:25,2:24:41.88:606,42,0	0/0:17,0:17:14.27:0,14,139	0/0:17,0:17:39.84:0,40,200	0/0:11,0:11:12.56:0,13,151	0/0:7,0:7:2.84:0,3,14
chr10	78602985	.	CACCACACACACACACA	C	1771.74	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.764;DP=612;FS=4.641;HRun=0;HaplotypeScore=246.9240;InbreedingCoeff=0.4086;MQ=58.96;MQ0=34;MQRankSum=1.658;QD=17.20;ReadPosRankSum=-0.016;VQSLOD=2.4089;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:99:307,0,1709	0/0:10,0:10:21.07:0,21,985	0/0:56,0:25:49.41:0,49,986	0/0:59,0:30:80.35:0,80,1259	0/0:17,0:17:39.13:0,39,947	0/1:18,0:15:99:180,0,977	0/1:29,0:29:99:279,0,671	0/0:24,0:21:61.45:0,61,1748	0/0:12,0:12:27.09:0,27,1407	0/0:26,0:26:78.27:0,78,2844	0/0:14,0:13:23.92:0,24,1166	0/0:24,0:23:50.90:0,51,1106	0/0:14,0:14:36.11:0,36,1427	0/0:13,0:13:33.11:0,33,1944	0/0:16,0:16:17.84:0,18,234	0/0:18,0:17:39.13:0,39,1952	0/0:17,0:17:48.15:0,48,2446	0/0:22,0:22:60.21:0,60,3761	0/0:23,0:21:63.21:0,63,1978	0/0:14,0:13:30.09:0,30,934	0/0:35,0:33:48.16:0,48,1993	0/0:24,0:23:13.81:0,14,306	0/0:18,0:16:6.76:0,7,160	0/0:29,0:25:54.36:0,54,1063	0/0:14,0:13:24.08:0,24,939	1/1:0,15:16:45.15:993,45,0	0/0:10,0:10:24.04:0,24,830	1/1:0,7:7:3.01:146,3,0
chr10	78602987	.	C	CACCACACACA	5365.47	PASS	AB=0.937;AC=23;AF=0.411;AN=56;BaseQRankSum=1.968;DP=646;FS=30.370;HRun=0;HaplotypeScore=206.1616;InbreedingCoeff=-0.0464;MQ=54.96;MQ0=37;MQRankSum=-4.777;QD=13.05;ReadPosRankSum=-3.932;VQSLOD=1.9222;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:34:99:265,0,126	0/1:9,0:10:99:184,0,130	0/0:54,0:23:54.45:0,54,658	0/0:57,0:28:57.74:0,58,764	0/0:19,0:18:36.11:0,36,445	0/1:14,0:15:54.45:136,0,54	0/1:29,0:30:47.75:48,0,159	0/1:28,0:24:99:225,0,435	0/0:10,0:12:26.88:0,27,525	0/1:27,0:27:99:399,0,481	0/1:17,0:17:99:123,0,131	1/1:23,0:24:51.17:1054,51,0	1/1:13,0:14:0.74:585,1,0	0/0:12,0:12:30.10:0,30,647	0/0:20,0:20:15.05:0,15,189	0/1:18,0:19:99:384,0,172	0/0:15,0:16:44.94:0,45,887	0/0:18,0:22:60.19:0,60,1089	0/1:23,0:22:99:177,0,459	0/1:14,0:13:99:157,0,131	0/1:35,0:36:40.71:41,0,411	1/1:7,10:30:9.43:129,9,0	1/1:3,8:21:6.49:244,6,0	1/1:28,0:26:47.03:768,47,0	0/1:11,0:13:93.84:291,0,94	0/0:16,0:16:40.52:0,41,423	0/1:12,0:12:99:156,0,114	0/0:7,0:7:3.01:0,3,70
chr10	78603019	.	A	ACACACACT	5177.54	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=0.336;DP=681;FS=1.395;HRun=0;HaplotypeScore=174.9420;InbreedingCoeff=0.3076;MQ=54.15;MQ0=37;MQRankSum=-4.124;QD=10.99;ReadPosRankSum=2.268;VQSLOD=3.8469;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:33:99:101,0,188	1/1:2,7:11:9.03:318,9,0	0/0:27,0:11:30.01:0,30,331	0/0:46,0:17:29.99:0,30,301	0/0:4,10:16:2.99:0,3,24	0/1:19,0:16:53.28:53,0,119	0/1:28,0:28:0.91:1,0,170	1/1:37,0:33:57.82:621,58,0	0/0:15,0:15:33:0,33,458	1/1:19,1:21:37.95:683,38,0	1/1:8,14:24:7.58:303,8,0	0/1:17,0:16:35.92:36,0,81	0/1:20,0:20:95.77:96,0,187	0/0:17,0:17:45.01:0,45,624	1/1:0,19:23:0.39:1,0,0	1/1:8,13:22:23.67:686,24,0	0/0:22,0:22:51.88:0,52,779	0/0:32,0:32:80.90:0,81,1006	0/1:22,0:20:41.48:342,0,41	1/1:3,12:18:11.97:347,12,0	1/1:60,0:57:72.83:701,73,0	0/1:29,0:29:21.64:22,0,134	0/1:18,0:16:80.14:80,0,85	0/1:27,0:23:12.96:13,0,114	1/1:6,9:14:12.04:444,12,0	0/0:21,0:19:32.97:0,33,441	1/1:2,16:20:8.96:329,9,0	0/0:13,0:12:14.94:0,15,156
chr10	78603820	.	CTT	C	4267.21	PASS	AB=0.763;AC=38;AF=0.679;AN=56;BaseQRankSum=8.542;DP=529;FS=0.443;HRun=16;HaplotypeScore=102.8069;InbreedingCoeff=0.8237;MQ=74.17;MQ0=8;MQRankSum=-2.689;QD=11.69;ReadPosRankSum=5.230;VQSLOD=3.9903;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:22:39.55:0,40,355	0/1:0,4:6:12.06:72,0,12	0/0:45,0:19:14.67:0,15,140	0/1:49,0:25:2.04:2,0,44	1/1:3,15:23:40.75:352,41,0	0/0:15,0:21:34.21:0,34,463	0/0:14,0:18:40.22:0,40,446	1/1:7,12:24:37.39:305,37,0	0/0:8,0:9:18:0,18,188	1/1:7,12:20:41.52:329,42,0	1/1:9,12:22:29.26:237,29,0	1/1:4,5:10:17.60:137,18,0	1/1:7,3:12:8.05:81,8,0	0/0:10,0:10:28.35:0,28,294	1/1:6,15:21:50.32:403,50,0	1/1:6,9:16:24.57:222,25,0	0/0:21,0:23:20.01:0,20,456	0/0:14,0:13:36.08:0,36,435	1/1:4,5:13:3.98:129,4,0	1/1:5,16:22:41.41:337,41,0	1/1:6,3:10:9.73:93,10,0	1/1:4,10:16:27.46:234,27,0	1/1:4,17:23:44.29:349,44,0	1/1:4,6:10:16.06:147,16,0	1/1:1,12:14:35.69:288,36,0	1/1:8,1:20:33.21:167,33,0	1/1:4,14:22:40.82:298,41,0	1/1:2,1:11:16.68:84,17,0
chr10	78604079	.	G	GCA	13241.90	PASS	AB=0.931;AC=25;AF=0.446;AN=56;BaseQRankSum=-0.420;DP=689;FS=16.773;HRun=0;HaplotypeScore=116.3301;InbreedingCoeff=0.9272;MQ=84.10;MQ0=0;MQRankSum=-1.674;QD=42.04;ReadPosRankSum=-2.893;VQSLOD=3.7420;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1478	1/1:0,13:13:39.13:731,39,0	0/0:19,0:20:34.11:0,34,697	0/0:27,0:27:50.34:0,50,654	1/1:1,11:13:33.11:599,33,0	0/0:12,0:12:36.12:0,36,529	0/0:37,0:37:99:0,111,1615	1/1:2,26:29:84.26:1463,84,0	0/0:21,0:21:60.20:0,60,883	1/1:0,26:28:84.21:1442,84,0	1/1:5,13:18:30.10:554,30,0	0/0:17,0:17:50.92:0,51,426	0/0:23,0:23:62.87:0,63,523	0/0:40,0:40:99:0,120,1725	1/1:0,21:22:60.09:1124,60,0	1/1:1,19:20:45.15:843,45,0	0/0:31,0:30:93.31:0,93,1361	0/0:35,0:35:99:0,102,1479	1/1:4,21:26:75.16:1296,75,0	1/1:2,16:19:39.13:723,39,0	1/1:2,50:55:99:2529,135,0	0/0:16,0:16:47.90:0,48,388	0/0:11,0:11:23.91:0,24,193	0/0:39,0:39:90.69:0,91,849	1/1:3,20:23:51.17:954,51,0	0/1:25,2:27:31.17:31,0,1006	1/1:1,21:22:51.17:954,51,0	0/0:9,0:9:27.09:0,27,398
chr10	78604256	.	C	CGTTTTTGTTTTT	1349.32	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-1.732;DP=679;FS=6.110;HRun=0;HaplotypeScore=218.7231;InbreedingCoeff=0.7533;MQ=71.78;MQ0=3;MQRankSum=-4.423;QD=13.77;ReadPosRankSum=-2.907;VQSLOD=1.8149;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:90.14:0,90,2376	0/0:9,0:9:21.06:0,21,533	0/0:23,0:20:2.68:0,3,28	0/0:29,0:24:8.47:0,8,72	0/0:22,0:22:30.10:0,30,811	0/0:20,0:20:45.15:0,45,1285	0/0:35,0:35:25.74:0,26,727	0/0:24,0:23:5.98:0,6,92	0/0:21,0:21:36.11:0,36,920	0/0:34,0:34:45.14:0,45,1056	0/0:17,0:17:24.05:0,24,637	1/1:16,3:23:6.02:347,6,0	1/1:10,2:15:3.01:174,3,0	0/0:25,0:25:42.13:0,42,1278	0/0:24,0:24:48.15:0,48,1373	0/0:23,0:23:36.07:0,36,1028	0/0:35,0:35:72.21:0,72,2117	0/0:20,0:20:33.11:0,33,996	0/0:31,0:30:26.18:0,26,685	0/0:25,0:25:33.09:0,33,852	0/0:27,0:27:30.09:0,30,944	1/1:11,3:18:15.01:457,15,0	1/1:15,2:22:3.01:174,3,0	1/1:12,3:20:6.02:340,6,0	0/0:24,0:24:45.11:0,45,1380	0/0:30,0:30:30.06:0,30,901	0/0:24,0:24:51.11:0,51,1583	0/0:14,0:14:6.02:0,6,180
chr10	78604550	.	ACACACACACGCACACACGCACAC	A	1655.33	PASS	AB=0.958;AC=20;AF=0.385;AN=52;BaseQRankSum=4.872;DP=445;FS=16.595;HRun=0;HaplotypeScore=183.6186;InbreedingCoeff=0.3357;MQ=37.12;MQ0=38;MQRankSum=-2.314;QD=9.74;ReadPosRankSum=-0.894;VQSLOD=1.4390;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:16:18.06:0,18,871	1/1:3,0:3:3.01:58,3,0	0/0:18,0:2:6.02:0,6,175	0/0:18,0:3:9.03:0,9,248	1/1:12,2:13:3.01:75,3,0	0/0:13,0:12:14.88:0,15,471	0/0:16,0:14:18.06:0,18,763	0/0:21,0:18:31.07:0,31,209	0/0:25,0:25:61.09:0,61,4500	0/1:16,1:14:74.18:369,0,74	./.	1/1:13,4:17:6.26:160,6,0	0/1:13,1:14:35.55:432,0,36	0/0:13,0:12:27.09:0,27,1631	1/1:8,5:11:2.82:106,3,0	0/1:14,1:15:5.81:346,0,6	0/0:40,0:39:60.20:0,60,3551	0/0:22,0:20:60.20:0,60,3061	0/1:10,0:8:45.89:68,0,46	0/1:13,1:14:0:1,0,0	1/1:22,0:16:3.48:57,3,0	1/1:10,3:12:2.91:83,3,0	1/1:6,1:7:3.01:39,3,0	./.	0/0:8,3:11:5.99:0,6,81	0/0:17,0:16:45:0,45,803	0/1:11,0:10:18.93:19,0,48	0/0:9,0:6:11.53:0,12,214
chr10	78604558	.	ACG	A	1154.97	PASS	AB=0.978;AC=35;AF=0.673;AN=52;BaseQRankSum=9.567;DP=446;FS=0.000;HRun=0;HaplotypeScore=108.5593;InbreedingCoeff=0.6574;MQ=40.96;MQ0=36;MQRankSum=-3.574;QD=4.66;ReadPosRankSum=-1.585;VQSLOD=2.7266;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:21:32.68:0,33,231	1/1:2,0:2:3:25,3,0	0/0:25,0:5:11.51:0,12,78	0/1:24,0:8:0.71:1,0,71	1/1:15,0:14:8.89:72,9,0	0/1:9,0:8:6.75:7,0,62	0/0:16,0:14:11.54:0,12,147	1/1:4,11:14:21.67:208,22,0	0/0:26,0:26:61.39:0,61,585	1/1:17,0:14:30.35:203,30,0	./.	1/1:16,0:16:11.81:80,12,0	1/1:12,0:12:15.96:112,16,0	0/0:17,0:16:26.67:0,27,205	1/1:13,0:11:2.94:18,3,0	1/1:15,0:15:11.70:73,12,0	0/0:40,0:40:57.11:0,57,528	0/0:20,0:18:33.19:0,33,469	1/1:9,0:7:0.95:33,1,0	0/1:13,1:14:0:0,0,0	1/1:21,0:15:5.95:49,6,0	1/1:10,0:9:2.80:25,3,0	1/1:10,0:10:11.96:94,12,0	./.	1/1:11,0:11:8.92:66,9,0	1/1:16,0:15:14.93:145,15,0	1/1:10,0:10:8.90:61,9,0	1/1:8,0:6:8.89:60,9,0
chr10	78604566	.	ACGCACACTCACACACACGCACACT	A	2914.73	PASS	AB=1.000;AC=33;AF=0.611;AN=54;BaseQRankSum=9.008;DP=440;FS=16.798;HRun=0;HaplotypeScore=218.9819;InbreedingCoeff=0.6712;MQ=45.14;MQ0=24;MQRankSum=-3.586;QD=13.56;ReadPosRankSum=-2.979;VQSLOD=0.2611;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:22:39.09:0,39,1569	1/1:4,0:4:9.02:109,9,0	0/0:31,0:10:22.75:0,23,681	0/0:29,0:12:35.93:0,36,749	1/1:19,0:18:15.03:231,15,0	0/0:10,0:9:2.27:0,2,643	0/0:19,0:17:24.94:0,25,1468	1/1:13,0:13:4.82:52,5,0	0/0:25,0:25:69.24:0,69,5042	1/1:15,0:13:36.07:617,36,0	./.	1/1:12,0:12:12.51:256,13,0	1/1:12,0:12:4.04:480,4,0	0/0:19,0:18:45.15:0,45,2406	1/1:11,0:9:3.01:113,3,0	1/1:14,0:14:15.03:448,15,0	0/0:35,0:34:37.38:0,37,3951	0/0:17,0:17:51.08:0,51,2751	1/1:4,0:4:8.99:97,9,0	1/1:14,0:14:0.21:1,0,0	1/1:20,0:17:9.48:125,9,0	1/1:14,0:13:8.99:124,9,0	1/1:12,0:12:18.02:230,18,0	0/1:10,0:8:0:0,0,0	1/1:8,0:8:6.02:98,6,0	0/1:16,0:15:20.95:21,0,404	1/1:10,0:9:9.01:100,9,0	0/1:7,0:6:1.32:1,0,64
chr10	78605295	.	TGTGTGTGTGTATGTGTGTGTGTGA	T	2669.45	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-2.285;DP=571;FS=8.518;HRun=0;HaplotypeScore=293.4117;InbreedingCoeff=-0.1636;MQ=60.65;MQ0=6;MQRankSum=0.178;QD=7.16;ReadPosRankSum=-1.072;VQSLOD=0.9776;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:63.86:114,0,64	0/1:6,0:6:14.94:15,0,352	0/0:31,0:18:19.30:0,19,501	0/0:26,0:22:25.45:0,25,436	0/1:15,0:15:37.87:38,0,338	0/0:11,0:11:12.04:0,12,191	0/1:23,0:23:91.82:92,0,92	0/1:26,0:25:75.07:75,0,1259	0/0:31,0:31:78.21:0,78,5729	0/1:20,0:20:85.55:86,0,2499	1/1:4,0:4:0.81:1,1,0	1/1:1,14:15:12.04:768,12,0	1/1:5,7:11:6.02:384,6,0	0/0:25,0:25:66.19:0,66,4911	0/1:26,0:26:19.45:19,0,1223	0/1:22,0:22:67.08:67,0,961	0/0:36,0:36:54.64:0,55,5040	0/0:38,0:38:93.64:0,94,7546	0/1:23,0:23:99:106,0,1606	0/1:13,0:13:41.55:42,0,176	0/1:48,0:47:98.79:99,0,398	1/1:3,0:3:5.99:49,6,0	1/1:6,0:6:2.66:24,3,0	1/1:6,30:35:12.04:738,12,0	0/1:15,0:15:9.91:10,0,615	0/1:17,0:17:64.55:65,0,1403	0/1:11,0:10:22.49:22,0,1228	0/1:12,0:12:28.86:29,0,592
chr10	78605296	.	GTGTGTGTGTA	G	2204.35	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=2.020;DP=567;FS=0.000;HRun=0;HaplotypeScore=173.2074;InbreedingCoeff=0.1074;MQ=60.61;MQ0=6;MQRankSum=-2.516;QD=6.28;ReadPosRankSum=0.009;VQSLOD=2.5780;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,3:20:23.97:333,24,0	0/0:6,0:6:6.49:0,6,123	0/0:32,0:19:22.15:0,22,535	0/0:27,0:22:31.78:0,32,543	0/1:14,0:14:16.50:16,0,99	1/1:5,6:11:12.04:357,12,0	1/1:16,7:23:24.08:460,24,0	0/1:25,0:24:96.89:97,0,340	0/0:32,0:32:81.28:0,81,2948	0/0:20,0:20:19.63:0,20,878	1/1:4,0:4:0.23:0,0,0	1/1:15,0:15:12.04:283,12,0	1/1:12,0:11:6.02:141,6,0	0/0:24,0:24:66.21:0,66,2466	0/1:26,0:26:26.39:26,0,450	0/1:22,0:22:66.35:66,0,354	0/0:36,0:36:86.83:0,87,2678	0/0:39,0:39:99:0,101,3882	0/1:24,0:24:13.53:14,0,602	0/1:13,0:13:28.26:35,0,28	0/1:46,0:45:13.06:13,0,160	0/1:3,0:3:0.05:0,0,0	1/1:5,0:5:2.99:24,3,0	1/1:35,0:34:12.04:274,12,0	0/1:13,0:13:23.67:24,0,181	0/1:17,0:17:99:120,0,370	0/1:11,0:10:22.78:23,0,437	0/1:12,0:12:75.80:76,0,183
chr10	78605317	.	TGA	T	1693.02	PASS	AB=0.993;AC=32;AF=0.615;AN=52;BaseQRankSum=10.354;DP=527;FS=0.960;HRun=0;HaplotypeScore=105.7271;InbreedingCoeff=0.2464;MQ=47.08;MQ0=8;MQRankSum=-3.932;QD=4.61;ReadPosRankSum=-1.482;VQSLOD=2.8227;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:10.90:56,11,0	1/1:3,0:3:5.98:47,6,0	0/0:12,0:9:1.17:0,1,169	0/1:19,0:8:20.11:20,0,52	1/1:12,0:12:5.96:45,6,0	1/1:15,0:15:20.28:129,20,0	1/1:34,0:34:19.69:103,20,0	0/1:20,0:19:33.90:181,0,34	0/0:33,0:33:59.34:0,59,1204	0/1:16,1:17:20.73:156,0,21	0/0:4,0:4:0:0,0,0	1/1:14,0:14:11.61:64,12,0	1/1:9,0:8:5.81:32,6,0	0/0:26,0:26:71.44:0,71,1005	1/1:19,0:19:17.05:127,17,0	0/1:19,0:19:2.35:128,0,2	0/0:37,0:37:53.60:0,54,852	0/0:40,0:40:99:0,107,1617	0/1:23,0:23:38.74:126,0,39	1/1:14,0:14:11.07:74,11,0	1/1:41,0:40:3.73:27,4,0	./.	./.	1/1:33,0:32:11.05:55,11,0	0/1:10,0:10:0.64:57,0,1	1/1:16,0:15:42.44:308,42,0	0/1:10,0:9:14.26:45,0,14	0/1:9,0:8:12.71:77,0,13
chr10	78605319	.	AGT	A	535.74	PASS	AB=0.959;AC=20;AF=0.385;AN=52;BaseQRankSum=6.827;DP=527;FS=6.848;HRun=0;HaplotypeScore=109.6948;InbreedingCoeff=0.2863;MQ=46.79;MQ0=10;MQRankSum=-2.142;QD=1.87;ReadPosRankSum=0.316;VQSLOD=1.7380;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,17:29:8.96:106,9,0	0/0:3,0:3:0:0,0,0	0/0:11,0:9:12.02:0,12,162	0/0:16,0:5:0:0,0,0	1/1:9,0:14:1.55:4,2,0	1/1:6,9:15:17.99:193,18,0	1/1:11,23:34:17.54:184,18,0	0/1:16,0:20:0.95:1,0,8	0/1:33,1:34:16.72:17,0,779	0/0:16,0:16:0.29:0,0,163	0/0:4,0:4:0:0,0,0	1/1:14,0:14:11.19:52,11,0	1/1:9,0:8:5.60:26,6,0	0/0:27,0:27:48.13:0,48,699	0/1:20,0:20:9.27:9,0,52	0/1:18,0:18:5.78:6,0,63	0/1:34,1:35:30.41:30,0,655	0/0:40,0:40:87.02:0,87,1246	0/0:27,0:25:3.65:0,4,83	0/0:13,0:13:0.39:0,0,2	0/0:38,0:37:2.97:0,3,23	./.	./.	1/1:34,0:33:10.68:46,11,0	0/0:10,0:10:0.80:0,1,37	0/0:16,0:15:4.25:0,4,32	0/0:10,0:9:15.33:0,15,112	0/1:9,0:8:9.03:9,0,38
chr10	78605323	.	T	TGA	564.49	PASS	AB=0.923;AC=12;AF=0.231;AN=52;BaseQRankSum=5.951;DP=522;FS=18.332;HRun=0;HaplotypeScore=110.4483;InbreedingCoeff=-0.0704;MQ=48.43;MQ0=11;MQRankSum=-0.064;QD=3.15;ReadPosRankSum=0.507;VQSLOD=1.3132;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:14.57:0,15,92	0/1:3,0:3:11.41:19,0,11	0/0:12,0:8:17.24:0,17,287	0/0:14,0:4:5.93:0,6,60	0/0:14,0:14:5.98:0,6,48	0/0:15,0:15:14.78:0,15,122	0/0:36,0:36:23.25:0,23,137	0/1:20,0:19:84.78:85,0,161	0/0:31,0:31:83.91:0,84,1053	0/1:15,1:16:52.80:162,0,53	0/1:4,0:4:0:0,0,0	0/0:16,0:16:14.61:0,15,88	0/0:9,0:8:5.81:0,6,32	0/0:26,0:26:69.10:0,69,843	0/1:19,0:19:56.49:76,0,56	0/1:8,9:18:30.89:31,0,34	0/0:32,0:32:82.59:0,83,1039	0/0:40,0:40:99:0,114,1512	0/1:28,0:26:88.30:151,0,88	1/1:12,0:12:5.03:30,5,0	0/1:19,18:39:11.43:43,0,11	./.	./.	0/0:34,0:33:9.13:0,9,48	0/1:9,0:9:18.31:62,0,18	0/0:17,0:16:44.99:0,45,311	0/1:9,0:8:34.63:47,0,35	0/0:9,0:8:12.01:0,12,116
chr10	78605325	.	T	TGA	375.19	PASS	AB=0.944;AC=11;AF=0.204;AN=54;BaseQRankSum=4.192;DP=523;FS=8.773;HRun=0;HaplotypeScore=111.3833;InbreedingCoeff=-0.0552;MQ=48.40;MQ0=11;MQRankSum=-4.846;QD=2.33;ReadPosRankSum=-0.410;VQSLOD=1.7376;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:17.74:0,18,132	1/1:3,0:3:0.98:12,1,0	0/0:12,0:7:20.85:0,21,248	0/0:15,0:4:6.02:0,6,72	0/1:12,2:15:11.85:12,0,22	0/0:16,0:16:18.31:0,18,125	0/0:36,0:36:26.74:0,27,190	0/1:20,0:19:41.03:41,0,160	0/0:31,0:31:80.92:0,81,1028	0/1:15,1:16:31.78:158,0,32	0/1:4,0:4:0:0,0,0	0/0:16,0:16:17.65:0,18,114	0/0:9,0:8:5.85:0,6,35	0/0:25,0:25:66.10:0,66,821	0/0:10,8:18:14.12:0,14,91	0/1:17,0:17:16.67:17,0,17	0/0:32,0:32:82.61:0,83,1041	0/0:40,0:40:99:0,114,1500	0/1:27,0:25:78.09:113,0,78	0/0:12,0:12:5.85:0,6,37	0/1:41,0:39:11.14:12,0,11	./.	0/0:4,0:4:2.99:0,3,23	0/0:34,0:33:11.60:0,12,67	0/1:8,1:9:10.27:32,0,10	0/0:17,0:16:41.16:0,41,279	0/1:7,2:8:38.07:113,0,38	0/0:9,0:8:6.02:0,6,68
chr10	78605341	.	T	TGC	2174.04	PASS	AB=0.929;AC=41;AF=0.732;AN=56;BaseQRankSum=4.416;DP=474;FS=5.447;HRun=0;HaplotypeScore=108.1811;InbreedingCoeff=0.7911;MQ=55.27;MQ0=10;MQRankSum=-2.666;QD=6.55;ReadPosRankSum=-4.122;VQSLOD=2.0058;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:31.57:219,32,0	1/1:2,0:2:2.98:21,3,0	0/0:19,0:15:22.22:0,22,291	0/0:15,0:7:17.96:0,18,170	0/1:12,1:13:0:0,0,0	1/1:16,0:16:19.75:110,20,0	1/1:36,0:36:30.84:200,31,0	1/1:15,0:14:22.98:156,23,0	0/0:23,0:24:59.95:0,60,679	1/1:15,0:15:32.08:233,32,0	0/0:4,0:4:0:0,0,0	1/1:14,0:14:11.30:86,11,0	1/1:9,0:9:10.11:65,10,0	0/0:22,0:22:54.08:0,54,598	1/1:16,0:16:14.69:99,15,0	1/1:12,0:12:17.64:145,18,0	0/0:24,0:24:46.70:0,47,669	0/0:33,0:33:86.90:0,87,1010	1/1:20,0:18:32.05:205,32,0	1/1:11,0:11:9.78:54,10,0	1/1:44,0:42:29.14:233,29,0	1/1:9,0:9:5.81:34,6,0	1/1:5,0:5:5.90:37,6,0	1/1:21,0:20:7.27:53,7,0	1/1:11,0:11:11.82:89,12,0	1/1:7,9:16:29.36:212,29,0	1/1:8,2:9:10.83:100,11,0	1/1:5,0:4:1.82:5,2,0
chr10	78605514	.	T	TCTTGCCCTGTCCAGCTTTAAC	10563.06	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-1.434;DP=461;FS=59.343;HRun=0;HaplotypeScore=229.5724;InbreedingCoeff=0.9228;MQ=94.45;MQ0=0;MQRankSum=-9.341;QD=157.66;ReadPosRankSum=1.713;VQSLOD=2.6257;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.27:0,78,4152	0/0:4,0:4:12.04:0,12,563	0/0:23,0:23:69.22:0,69,2851	0/0:23,0:23:57.19:0,57,2142	0/0:11,0:11:33.11:0,33,1518	0/0:8,0:8:21.07:0,21,1126	0/0:22,0:22:63.16:0,63,2805	0/0:27,0:27:72.24:0,72,2970	0/0:20,0:20:57.20:0,57,2896	0/0:14,0:14:39.13:0,39,1899	0/0:12,0:12:36.12:0,36,1867	1/1:3,2:12:9.03:881,9,0	1/1:3,4:13:21.07:1937,21,0	0/0:20,0:20:57.20:0,57,3110	0/0:22,0:22:57.20:0,57,2591	0/0:19,0:19:54.19:0,54,2650	0/0:33,0:33:96.29:0,96,4702	0/0:9,0:9:27.09:0,27,1345	0/0:22,0:22:63.20:0,63,2848	0/0:15,0:15:42.14:0,42,1859	0/0:41,0:41:99:0,117,5939	1/1:3,0:3:6.02:402,6,0	1/1:4,2:8:15.05:1341,15,0	1/1:3,2:9:15.05:1462,15,0	0/0:11,0:11:27.09:0,27,1456	1/1:11,3:21:54.18:4238,54,0	0/0:10,0:10:30.06:0,30,1583	1/1:1,0:1:3.01:301,3,0
chr10	78605638	.	AGGTGCAATCCAAT	A	1265.58	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=5.621;DP=292;FS=5.169;HRun=0;HaplotypeScore=105.8505;InbreedingCoeff=0.7731;MQ=105.85;MQ0=0;MQRankSum=-5.728;QD=52.73;ReadPosRankSum=2.848;VQSLOD=2.7527;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.27:0,84,4494	0/0:2,0:2:6.02:0,6,388	0/0:20,0:20:51.17:0,51,3078	0/0:22,0:22:60.21:0,60,2849	0/0:13,0:13:39.13:0,39,2400	0/0:8,0:8:21.07:0,21,1108	0/0:11,0:11:33.11:0,33,2123	0/0:15,0:15:42.14:0,42,2369	0/0:15,0:15:42.14:0,42,2750	0/0:8,0:8:24.08:0,24,1336	0/0:3,0:3:9.03:0,9,590	1/1:1,1:2:3.01:119,3,0	1/1:2,4:6:6.02:238,6,0	0/0:9,0:9:27.08:0,27,1587	0/0:9,0:9:27.09:0,27,1773	0/0:16,0:16:48.14:0,48,2791	0/0:17,0:17:48.16:0,48,2839	0/0:13,0:13:36.10:0,36,2141	0/0:13,0:13:33.11:0,33,1844	0/0:2,0:2:6.02:0,6,369	0/0:22,0:22:66.23:0,66,4198	1/1:0,2:2:6.02:237,6,0	1/1:3,2:5:3.01:119,3,0	1/1:2,2:4:6.02:237,6,0	0/0:8,0:8:24.08:0,24,1481	1/1:0,3:3:9.03:357,9,0	0/0:13,0:13:39.13:0,39,2188	1/1:1,1:2:3.01:118,3,0
chr10	78605719	.	G	GGA	1772.93	PASS	AC=36;AF=0.750;AN=48;BaseQRankSum=0.401;DP=153;FS=2.513;HRun=0;HaplotypeScore=33.9432;InbreedingCoeff=0.7444;MQ=109.22;MQ0=0;MQRankSum=-4.723;QD=19.92;ReadPosRankSum=-3.448;VQSLOD=2.5881;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:26.89:235,27,0	1/1:1,0:1:2.98:21,3,0	0/0:16,0:16:33.43:0,33,405	0/0:19,0:19:41.60:0,42,491	1/1:3,0:3:9.01:97,9,0	1/1:3,0:3:8.99:74,9,0	1/1:4,0:5:8.98:72,9,0	1/1:10,1:11:29.92:271,30,0	0/0:4,0:4:12.04:0,12,180	1/1:2,0:3:5.38:50,5,0	./.	1/1:1,0:1:3:25,3,0	1/1:2,0:2:6:58,6,0	0/0:6,0:6:18.05:0,18,250	1/1:6,0:7:20.70:193,21,0	1/1:1,5:13:18.03:212,18,0	0/0:8,0:8:24.05:0,24,317	0/0:7,0:7:21.07:0,21,314	1/1:5,0:5:14.95:124,15,0	./.	1/1:6,0:7:9.46:75,9,0	./.	1/1:1,0:1:3:25,3,0	1/1:7,0:7:14.91:133,15,0	1/1:2,0:2:5.94:42,6,0	./.	1/1:7,1:8:23.86:214,24,0	1/1:1,0:1:3:25,3,0
chr10	78606025	.	GAA	G	2152.94	PASS	AB=0.848;AC=39;AF=0.696;AN=56;BaseQRankSum=0.772;DP=405;FS=25.035;HRun=14;HaplotypeScore=61.4873;InbreedingCoeff=0.6302;MQ=50.96;MQ0=12;MQRankSum=-3.978;QD=7.80;ReadPosRankSum=0.724;VQSLOD=-0.3000;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:57.30:0,57,558	1/1:1,2:2:3:28,3,0	0/0:6,0:2:3.01:0,3,36	0/1:17,0:2:1.59:2,0,2	1/1:3,7:11:11.80:156,12,0	0/0:15,0:15:25.53:0,26,200	0/0:12,0:12:26.97:0,27,225	1/1:9,12:19:1.99:234,2,0	0/1:11,1:11:1.19:1,0,277	1/1:7,9:17:17.48:199,17,0	1/1:1,7:6:5.99:55,6,0	1/1:3,1:13:27.69:134,28,0	1/1:3,0:16:21.94:95,22,0	0/0:16,0:15:36.08:0,36,423	1/1:6,8:15:11.96:111,12,0	1/1:3,11:12:20.97:191,21,0	0/0:24,0:30:76.10:0,76,854	0/0:12,0:13:13.04:0,13,399	1/1:7,9:15:4.70:202,5,0	1/1:3,2:5:5.98:55,6,0	1/1:2,3:5:9.01:83,9,0	1/1:2,0:11:1.42:18,1,0	1/1:5,0:8:10.27:61,10,0	1/1:5,1:19:33.15:158,33,0	1/1:2,5:7:8.73:67,9,0	1/1:5,10:15:14.68:174,15,0	0/1:11,17:22:9.26:244,0,9	1/1:3,5:9:8.74:67,9,0
chr10	78606034	.	A	AAG	1874.73	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.603;DP=431;FS=0.000;HRun=0;HaplotypeScore=64.6012;InbreedingCoeff=0.8350;MQ=51.14;MQ0=16;MQRankSum=2.270;QD=26.04;ReadPosRankSum=3.984;VQSLOD=4.1153;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:35:77.98:1194,78,0	0/0:2,0:1:2.99:0,3,24	0/0:6,0:2:3.01:0,3,41	0/0:14,0:4:8.48:0,8,58	0/0:12,0:12:31.76:0,32,228	1/1:1,17:18:21:392,21,0	1/1:0,14:17:27.09:429,27,0	0/0:22,0:19:51.54:0,52,371	0/0:11,0:10:30.06:0,30,368	0/0:20,0:18:47.46:0,47,374	0/0:10,0:8:11.92:0,12,87	0/0:12,0:11:32.84:0,33,254	0/0:18,0:18:38.84:0,39,305	0/0:20,0:18:47.88:0,48,507	0/0:12,0:12:23.91:0,24,190	0/0:15,0:13:20.51:0,21,219	0/0:30,0:30:86.01:0,86,978	0/0:14,0:14:36.62:0,37,452	0/0:15,0:14:38.52:0,39,292	0/0:5,0:5:14.93:0,15,115	0/0:8,0:8:20.95:0,21,171	0/0:11,0:11:17.78:0,18,132	0/0:11,0:10:26.63:0,27,182	0/0:21,0:20:44.17:0,44,331	0/0:8,0:7:11.96:0,12,96	0/0:20,0:18:50.61:0,51,400	0/0:33,0:27:62.61:0,63,495	0/0:9,0:9:17.95:0,18,144
chr10	78606250	.	TGTGCGTGCGCGCGGAC	T	8010.87	PASS	AB=0.500;AC=23;AF=0.411;AN=56;BaseQRankSum=8.137;DP=595;FS=4.763;HRun=0;HaplotypeScore=315.8328;InbreedingCoeff=0.8565;MQ=58.42;MQ0=4;MQRankSum=-10.275;QD=51.35;ReadPosRankSum=2.608;VQSLOD=3.7506;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:52.06:0,52,2575	1/1:0,10:10:10.91:495,11,0	0/0:21,0:13:31.92:0,32,1443	0/0:12,0:9:18.05:0,18,735	0/1:0,10:10:0:0,0,0	0/0:28,0:27:45.76:0,46,2194	0/0:37,0:37:85.17:0,85,4484	1/1:0,5:5:15.05:454,15,0	0/0:38,0:38:99:0,108,7968	1/1:0,24:24:72.25:3389,72,0	1/1:0,14:14:1.89:3,2,0	0/0:30,0:29:72.25:0,72,4749	0/0:32,0:30:76.50:0,77,4818	0/0:31,0:31:84.29:0,84,6085	1/1:1,9:10:6.51:357,7,0	1/1:0,16:16:5.78:390,6,0	0/0:39,0:39:99:0,114,8008	0/0:14,0:13:36.12:0,36,2670	1/1:3,6:9:21.04:901,21,0	1/1:0,19:19:6.96:294,7,0	1/1:4,7:11:7.61:116,8,0	0/0:24,0:24:69.24:0,69,4837	0/0:26,0:26:72.25:0,72,4782	0/0:38,0:35:70.76:0,71,4614	1/1:0,15:15:1.73:144,2,0	0/0:31,0:30:90.30:0,90,5652	1/1:0,13:13:30.10:1467,30,0	0/0:8,0:8:24.08:0,24,1560
chr10	78606260	.	CGCGG	C	1188.99	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=11.366;DP=586;FS=1.732;HRun=0;HaplotypeScore=234.5734;InbreedingCoeff=0.6066;MQ=51.75;MQ0=4;MQRankSum=-9.763;QD=8.09;ReadPosRankSum=1.550;VQSLOD=2.7139;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:42.47:0,42,482	0/1:10,0:10:3.69:45,0,4	0/0:18,0:8:23.56:0,24,344	0/1:5,0:2:10.10:10,0,23	0/1:10,0:10:0:0,0,0	0/0:25,0:24:33.10:0,33,421	0/0:41,0:41:94.22:0,94,899	1/1:5,0:5:6.01:61,6,0	0/0:39,0:39:99:0,111,2870	1/1:24,0:24:66.96:623,67,0	0/1:14,0:14:0:1,0,0	0/0:32,0:31:82.05:0,82,1447	0/0:30,0:28:56.08:0,56,1295	0/0:31,0:30:87.24:0,87,2262	1/1:9,0:9:2.07:45,2,0	0/1:17,0:17:43.94:44,0,72	0/0:39,0:39:99:0,117,2997	0/0:14,0:13:39.13:0,39,1001	1/1:6,0:6:18.02:168,18,0	1/1:19,0:19:6.01:58,6,0	0/0:8,0:8:0.42:0,0,1	0/0:25,3:28:13.68:0,14,1316	0/0:24,1:25:44.26:0,44,1287	0/0:39,0:36:67.44:0,67,1354	1/1:15,0:15:2.52:27,3,0	0/0:27,0:27:72.04:0,72,1559	1/1:13,0:13:30.03:280,30,0	0/0:9,0:9:8.42:0,8,377
chr10	78606264	.	G	GAC	6989.53	PASS	AB=0.682;AC=15;AF=0.288;AN=52;BaseQRankSum=-4.148;DP=626;FS=13.168;HRun=0;HaplotypeScore=211.2318;InbreedingCoeff=0.3134;MQ=50.34;MQ0=5;MQRankSum=4.473;QD=21.37;ReadPosRankSum=-0.074;VQSLOD=4.1719;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,14:37:3.79:406,0,4	0/0:10,0:10:10.23:0,10,43	0/0:15,0:4:9.02:0,9,97	0/0:8,0:3:2.96:0,3,19	0/0:10,0:10:0:0,0,0	0/1:9,19:27:12.66:318,0,13	1/1:12,27:39:72.59:1103,73,0	0/0:5,0:5:3.73:0,4,16	0/0:41,0:42:99:0,101,1208	0/0:25,0:24:60.13:0,60,294	./.	0/1:18,17:34:7.61:855,0,8	0/1:7,21:27:22.49:682,0,22	0/0:32,0:32:84.09:0,84,1008	0/0:10,0:10:5.80:0,6,33	0/0:17,0:17:11.06:0,11,73	0/0:40,0:42:99:0,105,1245	0/0:16,0:17:28.03:0,28,470	0/0:8,0:7:17.04:0,17,84	0/0:19,0:19:5.30:0,5,23	./.	1/1:16,18:34:54.18:871,54,0	1/1:9,19:28:26.26:892,26,0	0/1:20,24:41:50.64:739,0,51	0/1:16,0:16:8.13:18,0,8	1/1:14,13:28:10.63:788,11,0	0/0:14,0:14:28.41:0,28,140	0/1:2,7:9:12.54:317,0,13
chr10	78606299	.	ACT	A	591.84	PASS	AB=1.000;AC=17;AF=0.315;AN=54;BaseQRankSum=8.833;DP=804;FS=1.678;HRun=0;HaplotypeScore=256.9799;InbreedingCoeff=0.4144;MQ=43.37;MQ0=32;MQRankSum=-11.499;QD=2.14;ReadPosRankSum=-0.719;VQSLOD=2.4738;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:45.10:0,45,745	1/1:11,0:10:3.87:19,4,0	./.	0/0:15,0:2:6.01:0,6,59	0/1:16,0:16:0:0,0,0	0/0:35,0:34:47.73:0,48,704	0/0:39,0:35:72.03:0,72,1154	0/1:24,0:18:40.61:133,0,41	0/0:53,0:52:99:0,146,2412	1/1:30,0:28:10.15:311,10,0	0/1:16,0:14:0.01:1,0,0	0/0:40,0:38:72.12:0,72,1166	0/0:32,0:32:59.31:0,59,968	0/0:43,0:42:99:0,114,1836	1/1:26,0:23:8.11:44,8,0	0/1:30,0:29:27.52:28,0,64	0/0:49,0:48:99:0,129,2334	0/0:24,0:23:47.10:0,47,954	0/1:23,0:17:66.30:66,0,96	1/1:22,1:23:2.12:13,2,0	0/1:29,0:21:0.03:0,0,0	0/0:35,0:34:44.87:0,45,658	0/0:27,0:27:60.16:0,60,1019	0/0:40,7:45:57.09:0,57,914	1/1:25,0:25:0.47:1,0,0	0/0:33,0:29:70.74:0,71,1250	0/1:23,0:22:54.41:123,0,54	0/0:9,0:9:21.07:0,21,396
chr10	78606301	.	TCA	T	1913.70	PASS	AB=0.580;AC=17;AF=0.327;AN=52;BaseQRankSum=8.018;DP=809;FS=2.359;HRun=0;HaplotypeScore=253.1620;InbreedingCoeff=0.7139;MQ=43.33;MQ0=33;MQRankSum=-11.705;QD=9.03;ReadPosRankSum=-2.789;VQSLOD=3.0199;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:37:48.04:0,48,739	1/1:2,9:10:8.82:77,9,0	./.	0/0:17,0:2:3.01:0,3,41	./.	0/0:34,1:35:41.88:0,42,658	0/0:42,0:36:54.09:0,54,887	1/1:14,10:18:36.07:432,36,0	0/0:52,1:52:99:0,144,2276	1/1:6,23:27:66.10:831,66,0	0/0:4,10:12:0:0,0,0	0/0:40,0:38:63.21:0,63,1018	0/0:32,0:32:60.98:0,61,865	0/0:45,0:43:94.55:0,95,1599	1/1:4,22:23:9.02:100,9,0	0/1:8,21:28:52.68:79,0,53	0/0:49,0:48:99:0,123,2049	0/0:26,0:25:63.28:0,63,938	1/1:17,5:17:1.42:197,1,0	1/1:8,15:23:2.12:13,2,0	0/0:18,10:20:0:0,0,0	0/0:35,0:34:27.09:0,27,456	0/0:27,0:27:51.07:0,51,765	0/0:47,0:45:42.10:0,42,683	1/1:8,17:25:2.97:20,3,0	0/0:32,0:28:71.93:0,72,1124	1/1:9,14:22:33.09:338,33,0	0/0:9,0:9:21.07:0,21,325
chr10	78606317	.	ACACACT	A	672.54	PASS	AB=0.967;AC=12;AF=0.231;AN=52;BaseQRankSum=4.101;DP=832;FS=1.193;HRun=0;HaplotypeScore=266.3535;InbreedingCoeff=0.0821;MQ=40.73;MQ0=39;MQRankSum=-5.747;QD=2.65;ReadPosRankSum=-8.374;VQSLOD=0.5153;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:41:41.51:0,42,788	0/1:12,1:12:6.94:52,0,7	0/0:20,0:3:8.52:0,9,104	./.	1/1:14,1:15:0.47:1,0,0	0/0:35,0:35:30.30:0,30,715	0/0:35,0:29:43.78:0,44,811	0/1:34,0:23:99:339,0,179	0/0:53,0:52:99:0,127,3713	0/1:27,1:26:99:162,0,280	0/0:14,0:12:0.47:0,0,1	0/1:46,0:44:7.52:8,0,942	0/0:34,0:34:25.38:0,25,665	0/0:40,0:38:74.90:0,75,2860	0/0:29,1:27:0.95:0,1,10	0/1:30,0:29:18.03:18,0,116	0/0:49,0:48:99:0,120,3297	0/0:32,0:31:74.16:0,74,1978	0/1:22,0:15:14.74:15,0,233	1/1:21,1:22:2.48:13,2,0	./.	0/0:29,0:28:22.31:0,22,438	0/0:26,0:26:25.87:0,26,469	0/0:44,0:42:36.49:0,36,490	0/1:22,3:25:0.13:0,0,0	0/0:34,0:31:34.71:0,35,978	0/1:18,1:18:99:192,0,132	0/0:7,0:7:12.10:0,12,193
chr10	78606323	.	T	TCA	7368.79	PASS	AB=0.722;AC=32;AF=0.615;AN=52;BaseQRankSum=8.613;DP=836;FS=1.882;HRun=0;HaplotypeScore=220.2813;InbreedingCoeff=0.6063;MQ=41.12;MQ0=33;MQRankSum=-3.748;QD=13.67;ReadPosRankSum=-3.124;VQSLOD=4.1270;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,31:42:47.79:780,48,0	1/1:7,0:10:2.66:18,3,0	0/0:18,1:3:9:0,9,98	./.	0/0:10,0:18:0:0,0,0	1/1:5,30:36:47.88:728,48,0	1/1:23,12:30:42.12:698,42,0	1/1:20,0:26:0.88:194,1,0	0/0:49,1:51:99:0,109,1431	1/1:16,0:22:35.84:306,36,0	0/0:11,0:12:0:0,0,0	1/1:29,21:48:70.52:1054,71,0	1/1:15,18:34:58.62:814,59,0	0/0:43,0:41:92.88:0,93,1126	0/1:16,0:30:0.05:0,0,0	0/1:16,0:31:31.02:31,0,32	0/0:46,0:46:96.13:0,96,1190	0/0:28,0:29:58.40:0,58,759	0/1:18,0:14:14.43:98,0,14	0/1:13,0:22:0.02:0,0,0	0/0:26,0:21:0.47:0,0,1	1/1:10,20:29:18.05:275,18,0	1/1:11,12:23:27.08:397,27,0	1/1:35,8:41:33.07:457,33,0	./.	1/1:21,16:34:69.15:1013,69,0	1/1:10,0:18:26.24:265,26,0	1/1:3,4:7:15.05:242,15,0
chr10	78606330	.	CACAT	C	434.40	PASS	AB=0.983;AC=17;AF=0.315;AN=54;BaseQRankSum=4.793;DP=826;FS=1.142;HRun=0;HaplotypeScore=247.2011;InbreedingCoeff=0.0922;MQ=40.74;MQ0=34;MQRankSum=-5.217;QD=1.37;ReadPosRankSum=-6.114;VQSLOD=0.7798;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:43:34.64:0,35,822	1/1:9,0:9:0.89:3,1,0	0/0:26,0:4:4.68:0,5,160	./.	0/1:18,0:18:0:0,0,0	0/0:37,0:37:3.50:0,3,662	0/0:32,1:27:45.37:0,45,724	0/1:34,0:23:99:159,0,131	0/0:49,0:48:99:0,120,2893	0/1:23,1:22:72.50:135,0,73	0/0:11,1:10:0:0,0,0	0/0:51,1:50:27.89:0,28,947	0/1:31,1:32:34.07:34,0,559	0/0:44,0:42:99:0,103,2325	1/1:33,0:31:2.93:38,3,0	0/1:30,1:30:12.62:13,0,136	0/0:44,0:43:99:0,102,2445	0/0:29,0:28:50.19:0,50,1510	0/1:20,0:14:39.11:39,0,99	1/1:22,1:22:2.09:13,2,0	1/1:30,0:20:2.03:6,2,0	0/0:29,1:29:4.43:0,4,343	0/1:19,1:20:60.85:61,0,176	0/0:38,0:36:2.82:0,3,222	0/1:23,0:23:0:0,0,0	0/0:40,0:36:58.87:0,59,1039	0/1:19,0:18:38.37:68,0,38	0/0:7,0:7:13.86:0,14,195
chr10	78606345	.	TCA	T	2926.53	PASS	AB=0.908;AC=18;AF=0.333;AN=54;BaseQRankSum=5.634;DP=780;FS=16.939;HRun=0;HaplotypeScore=180.7998;InbreedingCoeff=0.6576;MQ=41.83;MQ0=32;MQRankSum=1.882;QD=10.76;ReadPosRankSum=-2.429;VQSLOD=1.8949;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,1:41:56.88:0,57,933	0/1:1,0:5:0.07:0,0,0	0/0:38,0:4:3.01:0,3,41	0/0:40,0:3:6.02:0,6,97	0/0:10,0:19:0:0,0,0	0/0:34,0:34:53.80:0,54,891	0/0:35,0:30:48.07:0,48,792	0/0:23,0:20:33.98:0,34,259	0/0:47,0:46:90.90:0,91,1504	0/0:14,0:19:25.91:0,26,208	./.	1/1:18,27:43:59.70:835,60,0	1/1:8,18:26:45.06:523,45,0	0/0:39,0:38:93.20:0,93,1451	0/1:15,0:25:0.03:0,0,0	0/0:12,0:24:7.31:0,7,64	0/0:40,0:39:86.73:0,87,1328	0/0:32,0:31:63.03:0,63,1081	0/0:11,0:11:17.71:0,18,213	0/0:11,0:21:1.61:0,2,5	1/1:20,0:19:1.19:3,1,0	1/1:11,18:28:15.03:288,15,0	0/1:8,11:19:24.66:202,0,25	1/1:16,17:31:23.81:268,24,0	0/1:5,0:19:0:0,0,0	1/1:16,20:33:80.50:935,80,0	0/0:9,1:18:9.02:0,9,179	1/1:6,2:7:2.26:36,2,0
chr10	78606355	.	ACACACT	A	230.52	PASS	AB=0.934;AC=10;AF=0.179;AN=56;BaseQRankSum=6.805;DP=779;FS=5.577;HRun=0;HaplotypeScore=217.2646;InbreedingCoeff=0.1581;MQ=42.11;MQ0=32;MQRankSum=-5.233;QD=1.27;ReadPosRankSum=-4.064;VQSLOD=1.4187;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:60.17:0,60,1840	0/1:5,0:5:0.16:0,0,0	0/0:33,0:2:3.01:0,3,91	0/0:38,0:3:6.02:0,6,159	0/1:17,4:21:0:0,0,0	0/0:32,0:32:56.95:0,57,1845	0/0:35,0:31:47.56:0,48,1594	0/1:26,0:20:24.08:24,0,382	0/0:43,0:44:99:0,106,3023	0/1:21,3:21:99:189,0,100	0/0:11,2:13:0.47:0,0,1	0/0:40,0:39:35.58:0,36,802	0/0:26,0:27:52.44:0,52,681	0/0:39,0:39:99:0,105,2722	0/1:25,1:25:0.03:0,0,0	0/1:23,1:22:8.96:9,0,25	0/0:38,0:37:90.04:0,90,2680	0/0:34,0:33:20.55:0,21,2154	0/1:17,0:15:24.65:25,0,218	1/1:17,3:19:0.13:1,0,0	0/0:30,0:21:2.69:0,3,8	0/0:32,0:31:39.11:0,39,605	0/0:19,0:19:8.69:0,9,244	0/0:33,0:31:10.68:0,11,268	0/0:19,1:20:0.47:0,0,1	0/0:39,0:36:72.48:0,72,1011	0/1:14,4:18:92.35:92,0,149	0/0:9,0:8:8.96:0,9,112
chr10	78606374	.	CAT	C	228.64	PASS	AB=0.834;AC=10;AF=0.185;AN=54;BaseQRankSum=7.234;DP=718;FS=4.587;HRun=0;HaplotypeScore=167.5734;InbreedingCoeff=0.2787;MQ=42.81;MQ0=37;MQRankSum=-5.908;QD=1.58;ReadPosRankSum=-2.244;VQSLOD=1.6798;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:60.08:0,60,1108	1/1:4,1:5:1.25:3,1,0	0/0:25,0:2:6.02:0,6,96	0/0:30,0:4:6.02:0,6,116	0/0:14,7:20:0:0,0,0	0/0:27,0:27:64.36:0,64,1102	0/0:34,0:30:54.17:0,54,976	0/0:22,0:16:42.11:0,42,573	0/0:43,1:44:34.17:0,34,1832	0/1:17,7:19:99:264,0,282	0/1:8,4:12:0:0,0,0	0/0:39,0:38:72.89:0,73,1366	0/0:23,0:23:43.31:0,43,743	0/0:41,0:38:83.24:0,83,1710	0/1:20,2:20:0.02:0,0,0	0/1:17,3:19:0.37:0,0,82	0/0:37,0:36:93.12:0,93,1706	0/0:37,0:36:97.02:0,97,1733	0/1:13,1:13:14.16:14,0,356	0/0:13,3:16:0.05:0,0,1	1/1:28,4:22:1.22:3,1,0	0/0:25,0:25:45.15:0,45,868	0/0:18,0:16:24.08:0,24,461	0/0:38,0:35:23.68:0,24,461	./.	0/0:30,0:26:66.22:0,66,1235	0/1:11,5:16:43.30:43,0,278	0/0:10,0:9:12:0,12,160
chr10	78606385	.	ACAC	A	502.68	PASS	AB=0.790;AC=9;AF=0.173;AN=52;BaseQRankSum=5.735;DP=666;FS=11.609;HRun=0;HaplotypeScore=167.8766;InbreedingCoeff=0.1512;MQ=41.92;MQ0=35;MQRankSum=-8.046;QD=4.30;ReadPosRankSum=-0.610;VQSLOD=2.1253;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:51.08:0,51,811	0/1:2,3:5:0.20:0,0,0	0/0:13,0:1:3.01:0,3,74	0/0:18,0:2:3.01:0,3,63	./.	0/0:24,0:24:56.83:0,57,789	0/0:35,0:32:51.17:0,51,790	0/1:19,3:12:20.11:131,0,20	0/0:42,0:42:99:0,110,2516	0/1:18,7:21:7.99:322,0,8	1/1:4,8:12:0.47:1,0,0	0/0:37,0:36:78.21:0,78,1249	0/0:25,0:25:45.04:0,45,675	0/0:37,0:34:90.11:0,90,2072	0/0:7,11:16:0:0,0,0	0/1:9,4:12:20.82:21,0,82	0/0:33,0:33:88.18:0,88,1996	0/0:38,0:37:99:0,102,2333	0/1:12,0:9:25.27:25,0,105	0/1:9,6:13:0:1,0,0	0/0:31,6:25:0.85:0,1,2	0/0:27,0:27:44.02:0,44,691	0/0:18,0:15:24.08:0,24,377	0/0:41,0:38:23.92:0,24,380	./.	0/0:30,0:25:72.24:0,72,1107	0/1:9,4:13:30.14:113,0,30	0/0:8,0:7:12.04:0,12,178
chr10	78606395	.	ACACAC	A	438.54	PASS	AB=0.826;AC=12;AF=0.240;AN=50;BaseQRankSum=6.034;DP=628;FS=14.035;HRun=0;HaplotypeScore=171.9548;InbreedingCoeff=0.3260;MQ=42.27;MQ0=39;MQRankSum=-6.991;QD=3.35;ReadPosRankSum=-0.087;VQSLOD=1.6471;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:48.16:0,48,1184	0/1:3,1:4:0:0,0,0	0/0:7,0:1:3.01:0,3,72	./.	./.	0/0:21,0:21:44.70:0,45,1244	0/0:37,0:34:57.17:0,57,1219	0/1:22,0:11:9.54:10,0,132	0/0:44,0:43:99:0,109,3250	1/1:11,10:17:13.78:400,14,0	1/1:8,4:12:0.47:1,0,0	0/0:34,0:33:73.49:0,73,2306	0/0:22,0:22:36.02:0,36,1102	0/0:37,0:33:84.75:0,85,2618	1/1:17,2:17:2.37:8,2,0	0/1:8,3:10:5.70:6,0,98	0/0:32,0:32:83.50:0,83,2558	0/0:38,0:37:99:0,103,2797	0/1:12,2:9:70.74:71,0,180	0/1:11,3:13:0.34:1,0,0	0/0:30,5:24:2.22:0,2,7	0/0:25,0:25:37.11:0,37,1487	0/0:16,0:14:24.08:0,24,799	0/0:40,0:36:23.92:0,24,800	./.	0/0:28,0:23:66.23:0,66,2087	0/1:7,5:11:64.14:64,0,105	0/0:8,0:8:12.04:0,12,376
chr10	78606402	.	C	CAT	2545.97	PASS	AB=1.000;AC=15;AF=0.300;AN=50;BaseQRankSum=3.857;DP=616;FS=2.369;HRun=0;HaplotypeScore=137.9431;InbreedingCoeff=0.4142;MQ=42.12;MQ0=44;MQRankSum=-0.239;QD=12.36;ReadPosRankSum=-1.774;VQSLOD=3.4665;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,13:28:38.95:572,39,0	0/1:4,0:4:0:0,0,0	0/0:11,0:1:2.97:0,3,20	./.	./.	1/1:6,14:19:42.13:778,42,0	1/1:20,16:33:27.22:851,27,0	0/1:21,0:9:46.73:75,0,47	0/0:45,0:43:99:0,108,1575	0/1:23,0:18:2:268,0,2	0/0:12,0:12:0.47:0,0,1	0/0:32,0:31:69.18:0,69,1024	0/0:18,0:18:33.03:0,33,473	0/0:40,0:36:93.23:0,93,1356	1/1:19,0:17:2.92:17,3,0	0/1:11,0:10:7.72:8,0,54	0/0:32,0:32:81.24:0,81,1212	0/0:33,0:33:86.47:0,86,1222	0/1:13,0:7:32.08:62,0,32	0/1:15,0:13:0:1,0,0	0/0:36,0:24:1.30:0,1,5	0/0:24,0:24:46.70:0,47,693	0/0:16,0:14:24.08:0,24,367	0/0:38,0:34:23.71:0,24,367	./.	0/0:28,0:23:63.17:0,63,936	0/1:12,0:11:67.47:67,0,89	0/0:8,0:8:15.05:0,15,221
chr10	78606438	.	CAT	C	518.53	PASS	AB=0.888;AC=15;AF=0.288;AN=52;BaseQRankSum=4.157;DP=548;FS=3.284;HRun=0;HaplotypeScore=106.1059;InbreedingCoeff=0.4189;MQ=39.14;MQ0=57;MQRankSum=0.316;QD=2.82;ReadPosRankSum=-3.728;VQSLOD=1.3699;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,7:15:30.59:31,0,181	0/0:2,0:2:1.25:0,1,3	0/0:32,0:2:5.75:0,6,69	0/0:27,0:2:6:0,6,81	./.	0/0:8,0:6:15.05:0,15,285	0/0:16,0:14:20.18:0,20,392	0/0:19,0:12:32.65:0,33,365	0/0:49,10:57:32.99:0,33,2236	0/0:26,0:21:37.59:0,38,510	0/0:8,0:8:0:0,0,0	0/1:17,3:17:23.07:80,0,23	1/1:13,3:16:9.08:141,9,0	0/0:38,2:40:95.54:0,96,1762	0/1:22,0:18:0:0,0,0	0/1:10,1:10:49.33:52,0,49	0/0:33,0:33:81.21:0,81,1471	0/0:32,1:33:19.42:0,19,1245	0/1:13,1:7:27.62:28,0,179	0/0:12,0:11:0:0,0,1	1/1:32,4:27:2.20:7,2,0	1/1:15,1:15:23.89:192,24,0	1/1:9,0:7:8.58:68,9,0	1/1:21,1:19:10.52:74,11,0	./.	0/0:13,0:12:6.37:0,6,202	0/0:11,0:9:9.02:0,9,124	0/0:6,0:6:17.79:0,18,124
chr10	78606441	.	ACT	A	644.39	PASS	AB=0.967;AC=21;AF=0.389;AN=54;BaseQRankSum=6.833;DP=543;FS=22.758;HRun=0;HaplotypeScore=103.1347;InbreedingCoeff=0.3903;MQ=38.51;MQ0=55;MQRankSum=-2.509;QD=2.79;ReadPosRankSum=-3.505;VQSLOD=-0.2351;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:14:4.49:0,4,68	0/0:1,1:2:1.25:0,1,3	0/0:31,0:2:6.02:0,6,109	0/0:30,0:2:6.02:0,6,115	./.	0/0:8,0:6:14.98:0,15,168	0/1:13,0:12:48.69:49,0,221	0/1:21,0:13:10.40:10,0,64	0/0:58,0:55:95.90:0,96,2220	0/0:21,1:19:5.98:0,6,217	0/1:9,0:8:0:0,0,0	0/1:20,0:17:42.12:46,0,42	1/1:14,0:14:10.02:60,10,0	0/0:40,0:40:99:0,102,1765	0/1:24,0:20:0:0,0,0	0/1:10,0:9:1.44:1,0,70	0/0:33,0:33:79.44:0,79,1396	0/0:33,0:33:51.80:0,52,1401	0/0:14,0:8:9.17:0,9,107	0/1:10,3:12:0.01:0,0,0	1/1:36,0:28:2.20:7,2,0	1/1:14,0:13:20.94:177,21,0	1/1:8,0:6:8.98:72,9,0	1/1:23,0:20:10.53:76,11,0	0/1:7,1:8:0:0,0,0	0/1:12,0:11:53.63:171,0,54	0/0:12,0:10:11.94:0,12,137	1/1:6,0:6:17.87:131,18,0
chr10	78606448	.	C	CAT	32.11	PASS	AB=0.949;AC=9;AF=0.173;AN=52;BaseQRankSum=4.326;DP=533;FS=32.257;HRun=0;HaplotypeScore=104.5194;InbreedingCoeff=0.2043;MQ=37.81;MQ0=55;MQRankSum=-5.146;QD=0.33;ReadPosRankSum=-2.701;VQSLOD=-0.0080;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:14:9:0,9,91	0/1:3,0:3:0:0,0,0	0/0:26,0:2:6.02:0,6,92	0/0:25,0:2:6.02:0,6,92	./.	0/0:9,0:7:8.98:0,9,73	0/1:12,0:12:18.38:18,0,99	1/1:21,0:11:17.57:58,18,0	0/0:61,0:59:99:0,138,1900	0/1:18,1:16:43.35:43,0,114	0/0:11,2:11:0.47:0,0,1	0/0:21,1:18:23.58:0,24,215	0/0:12,0:12:8.90:0,9,71	0/0:42,0:42:96.15:0,96,1405	./.	0/0:12,1:11:6.15:0,6,92	0/0:34,0:33:76.42:0,76,1098	0/0:32,0:32:71.64:0,72,1197	0/1:11,0:7:11.53:12,0,110	0/1:10,1:10:0.02:1,0,0	0/0:35,0:27:3.77:0,4,23	0/0:11,0:10:5.42:0,5,44	0/0:6,0:5:5.98:0,6,47	0/0:21,0:19:2.88:0,3,24	0/1:8,1:9:0:0,0,0	0/0:14,0:7:17.92:0,18,181	0/1:10,0:8:18.34:18,0,85	0/0:7,0:7:14.89:0,15,108
chr10	78606490	.	CAT	C	100.84	PASS	AB=0.956;AC=12;AF=0.222;AN=54;BaseQRankSum=5.864;DP=587;FS=25.249;HRun=0;HaplotypeScore=117.1528;InbreedingCoeff=-0.0348;MQ=37.94;MQ0=65;MQRankSum=-4.226;QD=0.69;ReadPosRankSum=-3.472;VQSLOD=-0.5782;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:18:15.05:0,15,258	0/1:6,2:8:31.01:31,0,162	0/0:37,0:3:6:0,6,66	0/0:44,0:6:14.93:0,15,139	0/0:21,0:21:20.42:0,20,350	0/1:14,0:12:12.94:13,0,52	0/0:14,0:11:5.88:0,6,115	0/0:28,0:12:35.89:0,36,495	0/0:54,0:53:99:0,128,2194	0/1:20,2:17:60.55:61,0,312	0/0:11,2:9:6.01:0,6,113	0/1:18,0:16:34.71:35,0,95	0/1:15,0:14:6.92:7,0,101	0/0:40,0:40:99:0,104,1562	0/0:27,1:24:12.05:0,12,260	0/0:10,1:10:1.43:0,1,109	0/0:29,0:27:66.11:0,66,1172	0/0:33,0:32:73.01:0,73,1219	0/1:9,0:3:11.95:12,0,106	0/1:13,3:14:27.15:27,0,250	0/0:35,0:29:23.38:0,23,331	./.	0/1:8,0:8:0:0,0,0	0/1:11,0:11:0.11:0,0,0	0/0:14,2:15:7:0,7,298	0/1:22,0:16:30.10:30,0,255	0/0:10,1:10:22.87:0,23,364	1/1:4,0:4:2.92:17,3,0
chr10	78606492	.	TACACACATACTCACACACTC	T	484.03	PASS	AB=1.000;AC=12;AF=0.222;AN=54;BaseQRankSum=4.543;DP=604;FS=41.501;HRun=0;HaplotypeScore=225.1106;InbreedingCoeff=0.0527;MQ=38.07;MQ0=65;MQRankSum=-3.350;QD=3.27;ReadPosRankSum=-5.393;VQSLOD=-0.3581;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:20:7.92:8,0,241	0/1:8,0:8:48.82:49,0,204	0/0:38,0:4:0.77:0,1,206	0/0:44,0:6:17.95:0,18,513	0/0:22,0:22:5.43:0,5,415	0/1:14,0:12:13.71:14,0,108	0/0:14,0:11:8.20:0,8,271	0/0:26,0:12:30.10:0,30,534	0/0:54,0:53:99:0,111,4094	0/0:22,0:17:30.03:0,30,551	0/0:14,0:9:6.02:0,6,171	0/1:19,0:17:4.29:142,0,4	0/1:16,0:15:68.44:183,0,68	0/0:41,0:41:87.78:0,88,3307	0/0:30,0:26:17.03:0,17,412	0/0:11,0:10:5.89:0,6,164	0/0:29,0:27:60.11:0,60,2524	0/0:32,0:31:72.08:0,72,2771	0/1:9,0:3:3.03:3,0,90	0/1:16,0:14:17.74:18,0,378	0/0:35,0:31:29.34:0,29,611	./.	1/1:2,6:8:3.72:66,4,0	1/1:12,0:12:6.05:75,6,0	0/0:17,0:16:18.89:0,19,555	0/1:23,0:17:67.88:68,0,198	0/0:11,0:11:27.56:0,28,567	0/0:7,0:7:2.84:0,3,14
chr10	78606493	.	A	ACT	30.25	PASS	AB=0.856;AC=4;AF=0.074;AN=54;BaseQRankSum=4.262;DP=613;FS=2.817;HRun=0;HaplotypeScore=131.6554;InbreedingCoeff=0.3002;MQ=38.17;MQ0=64;MQRankSum=-3.150;QD=0.78;ReadPosRankSum=-2.129;VQSLOD=2.2335;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:17.95:0,18,244	0/0:8,0:8:20.62:0,21,249	0/0:38,0:4:9.50:0,10,133	0/0:44,0:6:15.05:0,15,210	0/0:22,0:22:32.62:0,33,448	0/0:14,0:12:5.76:0,6,65	0/0:15,0:12:6.28:0,6,92	0/0:25,0:12:36.04:0,36,489	0/0:54,0:53:99:0,127,1807	0/0:23,0:18:3.21:0,3,379	0/0:15,0:10:5.64:0,6,91	0/0:17,2:17:2:0,2,91	0/1:16,2:17:73.90:98,0,74	0/0:42,0:42:99:0,111,1483	0/0:31,0:27:18.06:0,18,268	0/0:11,0:10:6.49:0,6,93	0/0:29,0:27:65.22:0,65,917	0/0:32,0:31:84.24:0,84,1225	0/0:9,0:3:9:0,9,112	0/0:16,0:14:20.53:0,21,271	0/0:38,0:31:26.38:0,26,405	./.	1/1:6,2:8:2.80:20,3,0	0/1:10,3:13:0.16:0,0,0	0/0:17,0:16:23.96:0,24,335	0/0:24,0:18:35.08:0,35,368	0/0:13,0:12:5.60:0,6,336	0/0:7,0:7:0.89:0,1,2
chr10	78606501	.	ACT	A	380.74	PASS	AB=0.997;AC=17;AF=0.304;AN=56;BaseQRankSum=7.145;DP=627;FS=21.307;HRun=0;HaplotypeScore=137.2400;InbreedingCoeff=0.0146;MQ=38.49;MQ0=58;MQRankSum=-5.342;QD=1.54;ReadPosRankSum=-1.982;VQSLOD=0.7592;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:23:14.88:15,0,39	0/1:8,0:8:0.68:1,0,134	0/0:38,0:4:11.40:0,11,146	0/0:44,0:6:17.27:0,17,282	0/1:23,0:23:1.94:2,0,405	0/1:15,0:13:5.49:27,0,5	0/1:16,0:13:5.93:6,0,76	0/0:25,0:14:41.19:0,41,340	0/0:48,0:47:99:0,105,1814	0/0:23,0:19:15.34:0,15,331	0/1:15,0:10:1.44:1,0,62	0/1:19,0:18:9.74:10,0,50	0/1:21,0:20:39.59:40,0,93	0/0:38,0:38:68.40:0,68,1599	0/1:30,1:28:38.10:38,0,288	0/0:11,0:10:1.30:0,1,107	0/0:27,0:24:57.09:0,57,1011	0/0:38,0:37:99:0,102,1747	0/0:8,0:3:5.80:0,6,35	0/1:18,0:15:5.30:5,0,112	0/0:34,0:28:32.89:0,33,555	0/0:9,0:9:5.78:0,6,46	1/1:8,0:8:2.37:8,2,0	0/1:14,0:14:13.36:13,0,32	0/0:20,0:19:28.39:0,28,444	1/1:24,5:26:2.88:332,3,0	0/0:16,0:15:33.54:0,34,520	1/1:5,2:7:2.99:24,3,0
chr10	78606503	.	T	TCA	286.36	PASS	AB=0.981;AC=6;AF=0.107;AN=56;BaseQRankSum=3.120;DP=646;FS=6.567;HRun=0;HaplotypeScore=147.0505;InbreedingCoeff=0.0852;MQ=39.10;MQ0=56;MQRankSum=-2.753;QD=2.63;ReadPosRankSum=-2.859;VQSLOD=1.6080;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:12.48:0,12,66	0/0:8,0:8:14.58:0,15,89	0/0:36,0:4:11.81:0,12,95	0/0:43,0:6:17.71:0,18,192	0/0:24,0:24:32.07:0,32,216	0/0:15,0:13:1.86:0,2,11	0/1:16,0:13:11.85:12,0,30	0/0:24,0:14:6.06:0,6,20	0/0:49,0:48:93.27:0,93,1184	0/1:23,2:22:43.45:194,0,43	1/1:15,2:12:9.03:126,9,0	0/0:19,0:18:10.16:0,10,88	0/1:22,0:21:14.56:15,0,104	0/0:40,0:40:96.19:0,96,1169	0/0:31,0:28:1.56:0,2,122	0/0:12,0:11:5.96:0,6,46	0/0:27,0:24:54.16:0,54,689	0/0:37,0:36:96.16:0,96,1122	0/0:8,0:3:2.98:0,3,24	0/0:21,0:18:15.27:0,15,84	0/0:38,0:30:35.62:0,36,241	0/0:9,0:9:4.43:0,4,35	0/0:9,0:9:2.97:0,3,9	0/0:17,0:16:5.90:0,6,40	0/0:22,0:21:29.27:0,29,187	0/1:29,0:27:58.78:59,0,81	0/0:16,0:15:30.78:0,31,223	0/0:7,0:7:2.88:0,3,15
chr10	78606505	.	ACACACT	A	526.64	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=5.260;DP=657;FS=0.586;HRun=0;HaplotypeScore=170.7592;InbreedingCoeff=0.0842;MQ=39.48;MQ0=54;MQRankSum=-6.520;QD=2.82;ReadPosRankSum=-0.255;VQSLOD=2.0072;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:23:5.13:22,0,5	0/0:9,0:9:0.36:0,0,183	0/0:32,0:4:4.58:0,5,59	0/0:40,0:6:0.53:0,1,167	0/0:24,0:24:36.34:0,36,645	0/1:15,0:13:5.65:6,0,12	0/1:19,0:16:8.69:23,0,9	0/1:26,0:14:99:99,0,104	0/0:49,0:48:98.95:0,99,2108	0/1:27,0:24:58.23:58,0,315	0/1:17,0:12:5.39:5,0,138	0/0:20,0:19:0.17:0,0,95	0/1:22,0:21:10.30:10,0,129	0/0:40,0:40:99:0,102,2062	0/0:32,0:29:18.37:0,18,412	0/0:12,0:11:8.83:0,9,169	0/0:27,0:24:54:0,54,1156	0/0:37,0:36:99:0,102,2176	0/0:8,0:3:5.97:0,6,63	0/0:25,0:22:33.98:0,34,364	0/0:39,0:31:38.64:0,39,771	0/0:9,0:9:2.35:0,2,66	0/0:9,0:9:4.62:0,5,22	0/0:18,0:17:9.28:0,9,104	0/0:22,0:21:36.05:0,36,626	1/1:26,3:27:10.87:392,11,0	0/0:18,0:17:15.96:0,16,560	1/1:5,2:7:3.01:48,3,0
chr10	78606509	.	ACT	A	1936	PASS	AB=0.973;AC=29;AF=0.518;AN=56;BaseQRankSum=0.900;DP=682;FS=3.785;HRun=0;HaplotypeScore=144.0270;InbreedingCoeff=-0.1360;MQ=39.94;MQ0=53;MQRankSum=-1.901;QD=3.98;ReadPosRankSum=-4.980;VQSLOD=1.1175;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,4:26:2.65:133,3,0	0/1:10,0:10:27.48:33,0,27	0/1:30,0:4:7.91:8,0,28	0/0:36,0:6:4.46:0,4,87	0/1:23,2:25:99:141,0,141	1/1:16,3:17:14.48:110,14,0	1/1:20,2:19:11.40:192,11,0	1/1:29,0:15:15.98:206,16,0	0/0:44,0:43:98.90:0,99,1351	0/1:34,0:30:26.05:189,0,26	1/1:17,0:12:2.30:12,2,0	0/1:19,1:19:18.87:19,0,52	0/1:22,0:21:16.20:16,0,85	0/0:39,0:39:57.13:0,57,1244	0/1:33,0:31:42.41:42,0,107	0/0:10,1:11:6.72:0,7,48	0/0:28,0:25:47.02:0,47,699	0/0:38,0:37:99:0,105,1444	0/1:11,0:5:18.28:18,0,26	0/1:23,3:23:22.73:249,0,23	0/1:42,0:35:33.31:33,0,175	0/1:12,0:11:2.86:81,0,3	1/1:7,2:9:6.02:89,6,0	0/1:17,1:17:18.29:32,0,18	0/1:23,1:23:99:102,0,122	0/1:29,1:28:2.77:345,0,3	0/1:17,1:17:32.83:33,0,144	1/1:7,0:7:2.98:22,3,0
chr10	78606540	.	CAA	C	740.47	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.517;DP=732;FS=10.119;HRun=3;HaplotypeScore=157.2269;InbreedingCoeff=0.8735;MQ=57.37;MQ0=12;MQRankSum=-1.756;QD=9.37;ReadPosRankSum=0.389;VQSLOD=-0.4579;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,4:32:46.96:375,47,0	0/0:16,0:16:44.77:0,45,476	0/0:22,0:9:23.91:0,24,216	0/0:19,0:16:2.95:0,3,316	0/0:32,0:32:70.28:0,70,876	1/1:22,3:24:28.98:223,29,0	1/1:19,2:20:37.83:284,38,0	0/0:32,0:30:43.44:0,43,589	0/0:30,0:30:78.11:0,78,1177	0/0:40,0:38:87.86:0,88,822	0/0:18,0:17:38.99:0,39,430	0/0:19,0:19:31.14:0,31,363	0/0:28,0:28:68.58:0,69,710	0/0:38,0:38:62.57:0,63,1265	0/0:31,0:31:76.92:0,77,768	0/0:18,0:18:53.73:0,54,461	0/0:25,0:23:48.65:0,49,625	0/0:37,0:37:59.18:0,59,1432	0/0:22,0:17:15.09:0,15,271	0/0:24,0:24:48.47:0,48,532	0/0:55,0:52:99:0,114,1206	0/0:17,0:16:35.39:0,35,341	0/0:13,0:13:2.47:0,2,100	0/0:29,0:27:50.12:0,50,526	0/0:26,0:25:49.73:0,50,709	0/0:32,0:31:55.18:0,55,774	0/0:20,0:20:39.32:0,39,528	0/0:10,0:10:17.81:0,18,133
chr10	78607794	.	TGAATATCTAATGTAAC	T	6551.73	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.757;DP=578;FS=5.562;HRun=0;HaplotypeScore=241.4255;InbreedingCoeff=0.9996;MQ=88.14;MQ0=0;MQRankSum=-10.933;QD=102.37;ReadPosRankSum=2.450;VQSLOD=4.3620;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:66.23:3220,66,0	0/0:11,0:11:33.10:0,33,2266	0/0:23,0:23:68.26:0,68,3891	0/0:24,0:24:69.24:0,69,3962	0/0:14,0:14:42.14:0,42,2907	1/1:0,12:12:33.11:1577,33,0	1/1:0,18:18:36.12:1755,36,0	0/0:25,0:25:75.26:0,75,5376	0/0:26,0:26:78.27:0,78,5961	0/0:25,0:25:75.25:0,75,5336	0/0:15,0:15:45.15:0,45,3609	0/0:20,0:20:60.19:0,60,4621	0/0:20,0:20:60.21:0,60,4401	0/0:16,0:16:48.15:0,48,3487	0/0:16,0:16:48.16:0,48,3342	0/0:23,0:23:69.24:0,69,5238	0/0:25,0:25:75.26:0,75,5703	0/0:35,0:35:99:0,105,8082	0/0:19,0:19:57.20:0,57,3984	0/0:23,0:23:69.24:0,69,4888	0/0:29,0:29:87.30:0,87,7015	0/0:23,0:23:69.24:0,69,5280	0/0:12,0:12:36.12:0,36,2337	0/0:32,0:32:96.33:0,96,7441	0/0:12,0:12:36.12:0,36,2645	0/0:20,0:20:60.21:0,60,4364	0/0:14,0:14:42.14:0,42,3381	0/0:12,0:12:36.12:0,36,2794
chr10	78608069	.	C	CT	1699.18	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-2.546;DP=526;FS=10.615;HRun=8;HaplotypeScore=82.6637;InbreedingCoeff=0.9932;MQ=75.97;MQ0=0;MQRankSum=-2.168;QD=23.60;ReadPosRankSum=1.113;VQSLOD=3.8189;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:32:42.27:735,42,0	0/0:9,0:9:23.99:0,24,215	0/0:18,0:16:28.89:0,29,259	0/0:26,0:21:29.26:0,29,283	0/0:14,0:14:36.02:0,36,329	1/1:3,13:16:33.12:442,33,0	1/1:4,20:24:35.80:665,36,0	0/0:32,0:32:78.02:0,78,709	0/0:20,0:20:54.02:0,54,493	0/0:22,0:22:57.02:0,57,522	0/0:17,0:18:44.03:0,44,384	0/0:17,0:17:35.98:0,36,321	0/0:9,0:9:19.56:0,20,168	0/0:17,0:17:48.03:0,48,439	0/0:17,0:17:39:0,39,357	0/0:10,0:10:30.02:0,30,274	0/0:25,0:25:65.97:0,66,586	0/0:16,0:16:41.98:0,42,373	0/0:15,0:15:36.01:0,36,329	0/0:24,0:24:60.02:0,60,548	0/0:22,0:22:42:0,42,377	0/0:14,0:14:39.01:0,39,353	0/0:11,0:11:33.01:0,33,298	0/0:24,0:24:39.02:0,39,356	0/0:18,0:18:42:0,42,384	0/0:28,0:28:69.02:0,69,631	0/0:16,0:16:48.03:0,48,439	0/0:12,0:12:18:0,18,165
chr10	78608627	.	TA	T	9356.72	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=10.301;DP=527;FS=0.400;HRun=8;HaplotypeScore=53.8433;InbreedingCoeff=0.9045;MQ=75.88;MQ0=0;MQRankSum=1.182;QD=23.51;ReadPosRankSum=-0.812;VQSLOD=4.9349;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,19:24:60.07:572,60,0	1/1:3,5:8:9.01:87,9,0	0/0:14,0:14:0.79:0,1,223	0/0:8,0:7:0.24:0,0,75	1/1:0,29:29:84.07:799,84,0	1/1:0,22:22:66.11:637,66,0	1/1:2,16:18:33.05:319,33,0	1/1:5,24:29:65.95:611,66,0	0/0:13,0:13:36.11:0,36,435	1/1:2,17:19:54.07:512,54,0	1/1:6,15:21:39:367,39,0	1/1:3,14:17:39.06:377,39,0	1/1:1,18:19:56.99:537,57,0	0/0:14,0:14:39.11:0,39,459	1/1:2,19:21:48.08:463,48,0	1/1:1,16:17:42.07:406,42,0	0/0:23,0:23:66.16:0,66,770	0/0:25,0:25:69.15:0,69,804	1/1:1,23:24:69.08:658,69,0	1/1:4,18:22:48.07:463,48,0	1/1:2,9:11:27.04:261,27,0	1/1:1,15:16:39.06:377,39,0	1/1:1,17:18:48.08:463,48,0	1/1:1,13:14:33.05:319,33,0	1/1:1,20:21:51.08:492,51,0	0/0:18,0:18:45.14:0,45,544	1/1:2,26:28:66.10:637,66,0	0/0:14,0:14:39.12:0,39,471
chr10	78608741	.	G	GA	2731.48	PASS	AB=0.921;AC=11;AF=0.196;AN=56;BaseQRankSum=-9.687;DP=593;FS=3.090;HRun=9;HaplotypeScore=56.1156;InbreedingCoeff=0.8443;MQ=68.36;MQ0=0;MQRankSum=0.183;QD=19.10;ReadPosRankSum=0.844;VQSLOD=4.0002;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,37:42:99:1210,111,0	0/0:9,0:9:23.99:0,24,208	0/0:12,0:11:10.76:0,11,146	0/0:19,0:15:32.99:0,33,286	0/0:29,0:29:80.98:0,81,703	1/1:1,16:17:48.13:529,48,0	1/1:2,18:20:48.13:531,48,0	0/0:23,0:23:38.94:0,39,335	0/0:28,0:28:71.94:0,72,619	0/0:23,0:23:53.96:0,54,469	0/0:15,0:15:38.96:0,39,335	0/0:18,0:18:50.99:0,51,443	0/0:16,0:16:41.93:0,42,357	0/0:12,2:14:2.81:0,3,253	0/0:15,0:15:35.98:0,36,312	0/0:22,0:22:59.99:0,60,521	0/0:30,0:31:77:0,77,652	0/0:24,0:24:23.83:0,24,435	0/1:32,3:35:12.60:13,0,583	0/0:23,0:23:47.98:0,48,416	0/0:15,0:15:38.99:0,39,338	0/0:27,0:27:71.96:0,72,621	0/0:22,0:22:59.99:0,60,521	0/0:21,0:21:44.97:0,45,391	0/0:24,0:24:62.99:0,63,547	1/1:5,15:20:38.84:459,39,0	0/0:20,0:19:44.94:0,45,387	1/1:2,7:9:15.04:166,15,0
chr10	78610047	.	GC	G	3855.73	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.673;DP=748;FS=5.541;HRun=2;HaplotypeScore=71.6157;InbreedingCoeff=0.9995;MQ=83.20;MQ0=0;MQRankSum=-2.200;QD=35.37;ReadPosRankSum=2.723;VQSLOD=4.3608;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,67:67:99:2337,181,0	0/0:15,0:15:42.14:0,42,630	0/0:20,0:20:48.09:0,48,679	0/0:24,0:24:36.01:0,36,821	0/0:23,0:23:69.20:0,69,989	1/1:0,23:23:63.20:818,63,0	1/1:0,19:19:54.18:701,54,0	0/0:23,0:23:63.21:0,63,943	0/0:28,0:28:81.25:0,81,1170	0/0:43,0:43:99:0,123,1787	0/0:12,0:12:36.12:0,36,537	0/0:31,0:31:90.29:0,90,1324	0/0:28,0:28:81.26:0,81,1195	0/0:19,0:19:57.15:0,57,812	0/0:31,0:31:93.29:0,93,1356	0/0:27,0:27:78.26:0,78,1168	0/0:32,0:32:96.31:0,96,1420	0/0:26,0:26:75.25:0,75,1123	0/0:26,0:26:78.26:0,78,1149	0/0:26,0:26:75.24:0,75,1105	0/0:35,0:35:96.31:0,96,1417	0/0:26,0:26:75.24:0,75,1103	0/0:30,0:30:90.26:0,90,1272	0/0:30,0:30:84.28:0,84,1259	0/0:17,0:17:51.16:0,51,746	0/0:27,0:27:78.26:0,78,1150	0/0:31,0:31:93.31:0,93,1384	0/0:9,0:9:27.09:0,27,404
chr10	78615499	.	TA	T	2886.26	PASS	AB=0.723;AC=34;AF=0.607;AN=56;BaseQRankSum=-3.234;DP=275;FS=21.684;HRun=12;HaplotypeScore=34.9009;InbreedingCoeff=0.7394;MQ=50.04;MQ0=9;MQRankSum=-2.045;QD=16.68;ReadPosRankSum=0.586;VQSLOD=2.4939;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:17.99:0,18,167	1/1:0,6:7:19.97:145,20,0	0/0:12,0:9:11.78:0,12,171	0/0:5,0:4:3.01:0,3,30	1/1:2,9:9:23.91:185,24,0	0/0:10,0:9:27.05:0,27,274	0/0:7,0:5:6.01:0,6,61	1/1:3,14:16:29.81:231,30,0	0/0:12,0:11:33.06:0,33,329	1/1:1,14:15:14.38:292,14,0	1/1:0,14:15:40.89:308,41,0	1/1:2,4:6:13.99:99,14,0	0/1:1,2:3:21.39:37,0,21	0/0:7,0:6:17.53:0,18,161	1/1:1,7:7:20.92:162,21,0	1/1:1,8:8:23.91:186,24,0	0/1:9,2:10:25.45:25,0,120	0/0:10,0:9:23.98:0,24,224	1/1:0,5:5:14.94:116,15,0	1/1:1,11:12:2.46:202,2,0	1/1:0,4:4:11.95:93,12,0	1/1:0,3:3:8.97:70,9,0	1/1:1,6:7:12.71:132,13,0	1/1:2,12:14:29.89:232,30,0	1/1:0,9:9:26.90:209,27,0	0/0:3,1:14:8.20:0,8,110	1/1:2,14:16:47.82:371,48,0	0/0:3,0:13:31.25:0,31,157
chr10	78615810	.	G	GAA	1802.20	PASS	AB=0.931;AC=31;AF=0.674;AN=46;BaseQRankSum=-0.705;DP=204;FS=16.231;HRun=0;HaplotypeScore=88.5579;InbreedingCoeff=0.0222;MQ=28.02;MQ0=22;MQRankSum=-3.010;QD=10.30;ReadPosRankSum=-1.223;VQSLOD=1.9116;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,2:9:17.71:60,0,18	1/1:2,0:2:3.40:17,3,0	./.	./.	1/1:7,0:5:3.40:18,3,0	0/1:7,1:6:29.15:29,0,49	0/0:9,0:5:6.36:0,6,59	1/1:6,16:20:7.81:878,8,0	0/1:8,0:8:15.20:62,0,15	1/1:10,0:5:10.61:71,11,0	0/1:7,0:5:31.04:31,0,34	./.	1/1:4,0:2:2.94:18,3,0	0/1:12,0:10:12.26:26,0,12	./.	./.	0/0:10,0:10:20.86:0,21,183	0/0:8,0:7:11.26:0,11,112	1/1:5,1:3:8.75:90,9,0	1/1:13,1:14:23.26:122,23,0	0/1:3,2:5:9.87:10,0,16	1/1:9,0:9:5.31:23,5,0	0/1:12,0:12:26.74:118,0,27	1/1:3,1:4:3.01:44,3,0	1/1:9,2:11:24.48:213,24,0	0/1:15,1:13:19.55:78,0,20	0/1:1,0:1:0:0,0,0	1/1:7,0:3:5.91:38,6,0
chr10	78616561	.	GGACA	G	7042.33	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=5.909;DP=647;FS=1.737;HRun=0;HaplotypeScore=140.7054;InbreedingCoeff=0.9680;MQ=56.02;MQ0=1;MQRankSum=-4.560;QD=19.08;ReadPosRankSum=-0.016;VQSLOD=4.7922;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:39,1:40:14.92:178,15,0	1/1:1,8:9:24.08:396,24,0	0/0:25,0:16:27.08:0,27,490	0/0:31,0:29:53.31:0,53,1066	1/1:2,14:16:24.51:368,25,0	1/1:15,0:15:24.07:284,24,0	1/1:40,1:41:42.10:501,42,0	1/1:6,21:27:59.41:774,59,0	0/0:24,0:24:51.14:0,51,1106	1/1:7,9:16:27:389,27,0	1/1:2,10:12:15.05:248,15,0	0/0:28,0:28:50.69:0,51,1161	0/0:17,0:17:9.83:0,10,552	0/0:20,0:20:48.16:0,48,1163	1/1:4,20:24:45.15:741,45,0	1/1:3,21:24:48.04:795,48,0	0/0:37,0:37:87.26:0,87,2000	0/0:22,0:22:57.12:0,57,1150	1/1:14,6:20:17.77:230,18,0	1/1:5,11:16:17.76:294,18,0	1/1:25,48:73:63.22:1043,63,0	0/0:7,0:7:15.02:0,15,265	0/0:13,0:13:27.04:0,27,456	0/0:30,0:30:81.20:0,81,1659	1/1:2,10:12:21.07:342,21,0	0/0:22,0:22:51.17:0,51,1180	1/1:3,21:24:29.73:459,30,0	0/0:2,0:2:6.02:0,6,147
chr10	78617120	.	G	GT	3869.11	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-12.868;DP=716;FS=31.071;HRun=1;HaplotypeScore=68.7201;InbreedingCoeff=0.9843;MQ=75.55;MQ0=0;MQRankSum=-0.880;QD=37.93;ReadPosRankSum=1.365;VQSLOD=1.5677;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,42:44:99:1622,110,0	0/0:6,0:6:15.05:0,15,195	0/0:24,0:24:72.21:0,72,895	0/0:36,0:35:99:0,105,1327	0/0:17,0:17:51.17:0,51,661	1/1:0,19:19:48.16:719,48,0	1/1:2,37:39:99:1528,102,0	0/0:34,0:34:93.29:0,93,1183	0/0:33,0:33:93.29:0,93,1194	0/0:21,0:21:63.18:0,63,781	0/0:8,0:8:15.05:0,15,194	0/0:24,0:24:72.18:0,72,878	0/0:16,0:16:45.15:0,45,584	0/0:28,0:28:84.27:0,84,1089	0/0:32,0:32:93.30:0,93,1207	0/0:36,0:36:99:0,102,1310	0/0:33,0:33:96.29:0,96,1229	0/0:14,0:14:42.08:0,42,510	0/0:23,0:23:63.19:0,63,800	0/0:14,0:14:42.12:0,42,531	0/0:71,0:71:99:0,202,2544	0/0:6,0:6:18.06:0,18,234	0/0:8,0:8:21.07:0,21,271	0/0:51,0:51:99:0,147,1893	0/0:11,0:11:30.10:0,30,389	0/0:29,0:29:84.24:0,84,1061	0/0:23,0:23:66.15:0,66,816	0/0:15,0:15:45.15:0,45,582
chr10	78617362	.	G	GTCTCTCTCTC	2758.15	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=-1.287;DP=334;FS=12.139;HRun=0;HaplotypeScore=112.5733;InbreedingCoeff=0.3169;MQ=71.85;MQ0=6;MQRankSum=-2.926;QD=10.95;ReadPosRankSum=-5.195;VQSLOD=-0.7209;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:12:24.08:0,24,445	1/1:4,0:4:3.01:66,3,0	0/1:17,0:7:0:0,0,0	0/1:31,0:17:19.29:19,0,27	1/1:13,1:13:5.99:75,6,0	0/0:10,0:10:24.08:0,24,639	0/0:5,0:5:9.03:0,9,271	1/1:36,0:35:49.65:1071,50,0	0/0:7,0:7:6.02:0,6,164	1/1:10,0:10:9.03:281,9,0	1/1:11,2:12:5.06:243,5,0	1/1:4,0:4:3:25,3,0	1/1:10,0:10:3:29,3,0	0/1:15,0:15:57.95:58,0,90	1/1:7,0:7:3:25,3,0	1/1:8,1:9:3:149,3,0	0/1:11,0:11:4.89:5,0,428	0/1:8,0:8:2.07:121,0,2	1/1:13,0:13:12.04:314,12,0	0/0:12,0:12:0.47:0,0,1	1/1:9,0:8:3:25,3,0	0/1:8,0:8:7.19:7,0,211	0/1:6,0:6:0:0,0,0	0/1:7,0:7:4.38:40,0,4	1/1:10,0:10:3:25,3,0	0/0:16,0:16:18.06:0,18,489	1/1:8,1:10:9.02:339,9,0	0/0:18,0:18:24.08:0,24,666
chr10	78617386	.	CTA	C	500.06	PASS	AB=0.972;AC=13;AF=0.295;AN=44;BaseQRankSum=0.446;DP=280;FS=1.890;HRun=0;HaplotypeScore=64.0692;InbreedingCoeff=0.2925;MQ=61.46;MQ0=8;MQRankSum=2.086;QD=4.03;ReadPosRankSum=-0.179;VQSLOD=1.4442;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,1:17:17.79:139,18,0	0/0:3,0:3:2.92:0,3,17	0/0:9,0:4:2.22:0,2,7	0/0:18,0:10:5.04:0,5,24	1/1:13,0:12:7.21:49,7,0	1/1:12,2:13:0.01:104,0,0	0/0:3,0:3:3.01:0,3,47	0/1:37,0:34:32.08:32,0,278	0/0:3,0:3:2.98:0,3,22	0/0:5,0:5:2.96:0,3,19	0/0:11,0:10:2.04:0,2,6	./.	0/0:7,0:7:2.22:0,2,7	0/1:10,1:11:12.56:46,0,13	./.	0/0:7,0:7:2.37:0,2,8	0/0:12,2:14:26.73:0,27,291	1/1:5,5:11:7.10:163,7,0	0/1:10,0:10:9.85:52,0,10	./.	0/0:5,0:4:2.98:0,3,22	./.	./.	./.	1/1:9,0:9:5.97:48,6,0	0/0:11,0:11:14.97:0,15,165	0/0:8,0:8:8.20:0,8,62	0/0:20,0:19:37.40:0,37,467
chr10	78617438	.	ATGTGTAT	A	320.78	PASS	AB=0.838;AC=4;AF=0.077;AN=52;BaseQRankSum=3.811;DP=305;FS=8.009;HRun=0;HaplotypeScore=109.8098;InbreedingCoeff=0.1353;MQ=59.93;MQ0=6;MQRankSum=-4.184;QD=14.58;ReadPosRankSum=-1.670;VQSLOD=1.9488;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.14:0,42,1565	0/0:4,0:4:11.71:0,12,389	0/0:10,0:2:3.01:0,3,45	0/0:43,0:11:14.83:0,15,145	0/0:14,1:15:29.06:0,29,1000	0/0:9,0:9:27.09:0,27,866	./.	0/0:35,0:35:99:0,105,3749	0/0:4,0:4:12.04:0,12,465	0/1:4,1:5:99:131,0,308	0/0:12,4:16:9.69:0,10,935	0/0:5,0:5:12.04:0,12,496	0/0:2,0:2:3.01:0,3,124	0/0:10,0:10:27.09:0,27,944	0/0:3,1:4:5.96:0,6,251	0/0:3,1:4:2.87:0,3,126	0/0:16,0:16:41.73:0,42,1589	0/0:19,0:19:25.06:0,25,1589	0/0:10,0:9:24.04:0,24,711	0/0:8,2:10:13.52:0,14,483	0/0:1,0:1:3.01:0,3,126	./.	0/0:6,0:6:6.49:0,6,249	1/1:1,0:1:3.01:48,3,0	0/0:11,2:13:19.73:0,20,766	0/0:12,0:12:36.12:0,36,1140	0/1:13,3:16:99:242,0,722	0/0:17,0:17:45.10:0,45,1594
chr10	78617459	.	T	TG	1652.59	PASS	AB=0.737;AC=14;AF=0.269;AN=52;BaseQRankSum=6.419;DP=361;FS=47.480;HRun=0;HaplotypeScore=91.0219;InbreedingCoeff=-0.2682;MQ=62.83;MQ0=10;MQRankSum=-5.149;QD=10.20;ReadPosRankSum=-6.512;VQSLOD=0.7813;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,1:22:57.10:0,57,772	0/1:3,1:4:52.83:53,0,72	0/0:22,0:4:2.97:0,3,41	0/0:51,0:13:13.92:0,14,141	0/1:11,2:15:57.97:58,0,324	0/0:9,0:9:27.09:0,27,378	./.	0/1:31,9:38:99:157,0,1132	0/0:6,0:6:18.06:0,18,250	0/1:4,7:11:92.66:312,0,93	0/1:11,7:18:99:244,0,291	0/0:6,0:6:11.79:0,12,74	0/0:3,0:3:3.01:0,3,41	0/0:8,0:8:21.07:0,21,294	0/1:3,3:7:68.86:107,0,69	0/1:2,3:5:32.92:81,0,33	0/0:17,0:17:45.06:0,45,568	0/0:17,0:17:41.56:0,42,530	0/1:10,3:12:94.63:95,0,302	0/1:8,3:12:99:158,0,142	0/1:1,3:4:35.93:39,0,36	./.	0/0:6,0:6:5.95:0,6,60	1/1:1,0:1:2.88:15,3,0	0/1:10,4:15:99:207,0,215	0/0:9,0:9:27.09:0,27,377	0/1:9,7:15:99:275,0,174	0/0:22,0:22:39.13:0,39,543
chr10	78617465	.	GTATGTA	G	234.81	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=3.948;DP=386;FS=3.754;HRun=0;HaplotypeScore=126.9460;InbreedingCoeff=0.5242;MQ=63.15;MQ0=10;MQRankSum=-4.531;QD=2.80;ReadPosRankSum=-2.001;VQSLOD=2.2454;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:54.18:0,54,1554	0/0:6,0:6:17.09:0,17,381	0/0:21,0:4:2.74:0,3,12	0/1:56,0:16:9.47:9,0,14	0/0:14,0:14:28.91:0,29,823	0/0:9,0:9:24.06:0,24,612	0/0:1,0:1:3.01:0,3,100	0/0:46,0:43:96.31:0,96,2369	0/0:6,0:6:18.06:0,18,554	0/0:16,0:15:44.18:0,44,1176	0/0:19,0:19:47.06:0,47,1445	1/1:0,6:6:6.02:90,6,0	1/1:0,3:3:9.03:137,9,0	0/0:9,0:9:27.08:0,27,735	0/0:7,0:7:15.05:0,15,417	0/0:5,0:5:9.03:0,9,239	0/0:17,0:17:38.83:0,39,1126	0/0:20,0:20:51.17:0,51,1523	0/0:14,0:13:30.10:0,30,745	0/0:12,0:12:25.49:0,25,731	0/0:4,0:4:6.02:0,6,203	./.	1/1:0,6:6:6.02:119,6,0	0/1:2,0:2:0:0,0,0	0/0:16,0:16:38.02:0,38,849	0/1:11,0:11:4.30:4,0,61	0/0:16,0:15:42.14:0,42,1096	0/0:22,0:22:5.04:0,5,247
chr10	78617487	.	ATATGTATATG	A	1359.04	PASS	AB=0.975;AC=5;AF=0.093;AN=54;BaseQRankSum=3.376;DP=453;FS=11.157;HRun=0;HaplotypeScore=161.9256;InbreedingCoeff=0.6429;MQ=59.81;MQ0=12;MQRankSum=-4.220;QD=12.82;ReadPosRankSum=0.705;VQSLOD=2.1144;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:45.15:0,45,1957	0/0:7,0:7:15.05:0,15,614	0/0:27,0:6:12.04:0,12,240	0/1:74,0:27:2.36:2,0,180	0/0:18,0:18:38.19:0,38,899	0/0:10,0:10:24.08:0,24,1020	0/0:2,0:2:6.02:0,6,233	0/0:48,0:45:99:0,111,2641	0/0:8,0:8:24.08:0,24,977	0/0:18,0:17:43.06:0,43,1682	0/0:23,0:23:56.93:0,57,1471	0/0:6,0:6:6.02:0,6,113	0/0:4,0:4:12.04:0,12,275	0/0:9,0:9:27.09:0,27,1175	0/0:11,0:11:26.67:0,27,806	0/0:6,0:6:12.04:0,12,382	0/0:22,0:22:51.17:0,51,1842	0/0:22,0:22:57.13:0,57,2412	0/0:16,0:15:33.05:0,33,838	0/0:15,0:15:35.29:0,35,884	0/0:4,0:4:6.02:0,6,215	./.	0/0:8,0:8:12.04:0,12,213	0/0:3,0:3:2.84:0,3,84	0/0:17,0:17:38.33:0,38,1173	1/1:1,8:9:21.07:639,21,0	0/0:19,0:18:45.14:0,45,1119	1/1:3,16:19:36.05:838,36,0
chr10	78617506	.	T	TG	634.07	PASS	AB=0.832;AC=8;AF=0.148;AN=54;BaseQRankSum=2.493;DP=492;FS=6.176;HRun=0;HaplotypeScore=119.8790;InbreedingCoeff=-0.1991;MQ=66.57;MQ0=10;MQRankSum=1.246;QD=4.59;ReadPosRankSum=-3.983;VQSLOD=2.3420;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:51.14:0,51,693	0/1:4,1:5:16.11:16,0,153	0/0:41,0:13:27.85:0,28,301	0/0:87,0:34:28.08:0,28,349	0/1:14,6:20:99:187,0,332	0/0:11,0:11:33.11:0,33,460	0/0:5,0:5:15.05:0,15,210	0/0:43,0:41:84.37:0,84,1468	0/0:10,0:10:30.10:0,30,419	0/1:18,2:20:9.92:10,0,648	0/1:16,7:23:99:233,0,308	0/0:6,0:6:8.99:0,9,103	0/0:6,0:6:17.99:0,18,227	0/0:10,0:10:30.10:0,30,419	0/1:10,1:11:18.18:18,0,245	0/0:4,1:5:8.62:0,9,94	0/0:22,0:22:63.10:0,63,831	0/0:27,1:28:69.16:0,69,997	0/1:21,1:19:41.80:42,0,536	0/1:11,7:18:99:166,0,273	0/0:2,0:2:3.01:0,3,42	./.	0/0:6,0:6:14.98:0,15,186	0/0:4,0:5:2.94:0,3,41	0/0:13,4:17:9.41:0,9,387	0/0:9,0:9:20.38:0,20,139	0/1:14,4:17:93.75:94,0,400	0/0:20,0:20:38.72:0,39,371
chr10	78617581	.	G	GAT	7238.86	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=-3.511;DP=377;FS=4.234;HRun=0;HaplotypeScore=56.4287;InbreedingCoeff=0.7961;MQ=68.31;MQ0=3;MQRankSum=0.756;QD=35.48;ReadPosRankSum=-1.198;VQSLOD=6.4932;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,1:23:0.60:0,1,566	1/1:1,3:3:9.03:152,9,0	1/1:8,0:7:0.46:7,0,0	0/1:7,0:5:16.85:17,0,45	1/1:0,11:11:27.09:455,27,0	0/0:18,0:18:42.12:0,42,526	0/0:7,0:7:15.05:0,15,193	1/1:12,33:44:99:1644,99,0	0/0:10,0:10:27.04:0,27,316	1/1:1,16:17:48.16:810,48,0	1/1:3,15:18:45.15:759,45,0	0/0:7,0:7:21.07:0,21,267	0/0:11,0:11:27.09:0,27,345	0/0:7,0:7:18.06:0,18,231	1/1:0,7:8:15.05:253,15,0	1/1:0,5:5:15.05:253,15,0	0/0:23,0:23:48.15:0,48,614	0/0:16,0:16:42.08:0,42,521	1/1:4,11:14:39.11:610,39,0	1/1:3,10:15:27.09:454,27,0	1/1:0,12:12:30.10:506,30,0	0/1:7,0:7:3.92:4,0,198	0/0:7,0:7:18.06:0,18,232	0/0:7,0:7:18.05:0,18,218	1/1:2,10:12:30.10:506,30,0	0/0:16,0:16:45.09:0,45,559	1/1:1,17:18:48.16:809,48,0	0/0:21,0:21:51.17:0,51,656
chr10	78618034	.	AG	A	9436.98	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=4.719;DP=615;FS=6.679;HRun=10;HaplotypeScore=67.7461;InbreedingCoeff=0.9959;MQ=74.69;MQ0=0;MQRankSum=-0.706;QD=19.46;ReadPosRankSum=4.350;VQSLOD=5.7584;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:56.94:488,57,0	1/1:3,10:13:29.91:252,30,0	0/0:24,1:24:31.08:0,31,285	0/0:16,0:17:33.60:0,34,286	1/1:5,32:37:90.15:746,90,0	1/1:5,28:33:80.98:703,81,0	1/1:4,13:17:32.96:286,33,0	1/1:6,17:23:40.59:342,41,0	0/0:17,0:17:42.10:0,42,456	1/1:9,35:44:99:898,104,0	1/1:2,13:15:32.99:286,33,0	1/1:3,13:16:14.16:242,14,0	1/1:2,15:17:38.81:338,39,0	0/0:14,0:14:42.01:0,42,447	1/1:1,32:33:83.98:729,84,0	1/1:5,9:14:26.99:234,27,0	0/0:17,0:17:45.11:0,45,490	0/0:11,0:11:33.03:0,33,343	1/1:3,13:16:38.96:333,39,0	1/1:2,30:32:80.65:667,81,0	1/1:4,27:31:62.98:547,63,0	1/1:3,23:26:65.83:555,66,0	1/1:4,20:24:53.94:462,54,0	1/1:0,12:12:26.99:234,27,0	1/1:4,26:30:62.98:547,63,0	0/0:16,0:16:39.08:0,39,407	1/1:3,27:30:62.98:547,63,0	0/0:12,0:12:26.90:0,27,241
chr10	78618315	.	T	TA	17082.18	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-12.893;DP=587;FS=17.093;HRun=3;HaplotypeScore=54.3856;InbreedingCoeff=0.9896;MQ=91.21;MQ0=0;MQRankSum=-4.469;QD=37.96;ReadPosRankSum=2.522;VQSLOD=3.2117;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:31:81.27:1134,81,0	1/1:0,11:11:33.11:462,33,0	0/0:26,0:26:72.14:0,72,804	0/0:20,0:20:46.65:0,47,513	1/1:1,30:31:87.29:1217,87,0	1/1:0,28:28:72.24:1008,72,0	1/1:1,13:14:39.13:546,39,0	1/1:3,24:27:72.24:1009,72,0	0/0:20,0:20:57.17:0,57,684	1/1:6,34:40:99:1408,102,0	1/1:2,15:17:48.12:639,48,0	1/1:0,17:17:48.16:672,48,0	1/1:0,14:14:42.14:587,42,0	0/0:15,0:15:42.13:0,42,504	1/1:0,10:10:30.10:420,30,0	1/1:0,18:18:54.18:756,54,0	0/0:14,0:14:42.13:0,42,502	0/0:20,0:20:60.16:0,60,705	1/1:1,21:22:57.18:780,57,0	1/1:2,23:25:69.19:944,69,0	1/1:0,22:22:63.21:882,63,0	1/1:2,20:22:63.21:876,63,0	1/1:2,22:24:63.21:882,63,0	1/1:0,13:13:36.12:504,36,0	1/1:3,33:36:93.31:1303,93,0	0/0:17,1:18:12.15:0,12,559	1/1:2,26:27:75.25:1050,75,0	0/0:4,0:4:12.04:0,12,144
chr10	78619047	.	G	GA	3204.07	PASS	AB=0.828;AC=41;AF=0.732;AN=56;BaseQRankSum=5.073;DP=568;FS=3.983;HRun=13;HaplotypeScore=139.6165;InbreedingCoeff=0.6350;MQ=74.91;MQ0=1;MQRankSum=-4.494;QD=7.01;ReadPosRankSum=-4.349;VQSLOD=0.9421;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:26:29.15:159,29,0	1/1:9,0:12:8.74:52,9,0	0/1:17,0:17:5.75:6,0,45	0/0:19,0:17:0.90:0,1,28	1/1:17,1:25:27.72:136,28,0	1/1:4,1:20:39.93:214,40,0	1/1:3,0:9:14.20:71,14,0	1/1:24,1:28:23.71:137,24,0	0/0:26,0:26:44.43:0,44,303	1/1:25,0:25:23.91:112,24,0	1/1:14,1:22:28.71:135,29,0	1/1:2,15:17:36.03:331,36,0	1/1:10,14:25:15.97:273,16,0	0/0:17,0:17:29.57:0,30,202	1/1:20,0:22:31.30:170,31,0	1/1:20,0:20:32.88:169,33,0	0/0:21,4:25:10.69:0,11,215	0/1:4,1:6:10.91:11,0,71	1/1:19,0:19:34.43:192,34,0	1/1:29,0:36:53.59:272,54,0	1/1:5,0:5:0.89:2,1,0	0/1:10,15:27:56.21:224,0,56	1/1:9,7:16:9.48:85,9,0	1/1:3,15:18:36.04:334,36,0	1/1:18,0:18:19.23:97,19,0	0/0:10,0:20:13.28:0,13,42	1/1:37,1:43:41.43:204,41,0	0/0:2,0:4:6.10:0,6,18
chr10	78623319	.	CA	C	760.28	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.426;DP=607;FS=14.337;HRun=9;HaplotypeScore=61.0770;InbreedingCoeff=0.9819;MQ=82.16;MQ0=0;MQRankSum=-1.496;QD=20.55;ReadPosRankSum=-0.071;VQSLOD=2.8892;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.19:0,63,726	0/0:10,0:10:27.08:0,27,312	0/0:21,1:22:19.38:0,19,432	0/0:11,0:11:18.03:0,18,182	0/0:32,0:32:90.27:0,90,1039	0/0:22,0:22:57.17:0,57,658	0/0:17,0:17:45.13:0,45,519	0/0:39,0:38:99:0,102,1167	0/0:24,0:24:66.18:0,66,752	0/0:30,1:31:62.79:0,63,970	0/0:25,0:25:66.20:0,66,762	0/0:11,0:11:27.08:0,27,312	0/0:17,0:17:45.13:0,45,519	0/0:15,0:15:39.11:0,39,447	0/0:20,0:20:51.15:0,51,589	0/0:17,0:17:45.13:0,45,519	0/0:15,0:15:45.13:0,45,513	0/0:15,0:15:30.09:0,30,346	0/0:25,0:25:66.20:0,66,762	0/0:40,1:41:80.84:0,81,1169	0/0:13,0:13:36.11:0,36,415	0/0:34,0:34:85.76:0,86,992	0/0:28,0:28:63.19:0,63,727	0/0:10,0:12:23.90:0,24,257	0/0:14,0:14:36.11:0,36,415	1/1:3,27:30:81.03:741,81,0	0/0:35,1:35:65.82:0,66,1011	1/1:2,5:7:15:137,15,0
chr10	78625129	.	TTCTTC	T	7883.22	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.409;DP=723;FS=10.526;HRun=0;HaplotypeScore=147.5660;InbreedingCoeff=0.9916;MQ=60.91;MQ0=0;MQRankSum=-11.407;QD=44.54;ReadPosRankSum=1.357;VQSLOD=4.8339;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:28:36.12:756,36,0	0/0:6,0:6:15.05:0,15,484	0/0:47,0:38:99:0,114,3178	0/0:26,0:22:60.80:0,61,1781	0/0:26,0:26:72.72:0,73,2325	1/1:0,11:11:27.09:586,27,0	1/1:2,12:14:24.08:476,24,0	0/0:27,0:27:81.28:0,81,2521	0/0:15,0:15:45.15:0,45,1430	0/0:30,0:30:90.31:0,90,2885	0/0:16,0:16:42.14:0,42,1357	1/1:2,20:22:54.19:1203,54,0	1/1:2,23:25:60.21:1326,60,0	0/0:29,0:29:87.30:0,87,2780	0/0:34,0:34:99:0,99,3197	0/0:38,0:38:99:0,111,3506	0/0:39,0:39:99:0,117,3664	0/0:23,0:23:69.24:0,69,2054	0/0:26,0:26:75.26:0,75,2280	0/0:19,0:19:57.20:0,57,1821	0/0:60,0:60:99:0,181,5709	1/1:1,32:33:81.28:1775,81,0	1/1:0,25:25:54.10:1107,54,0	1/1:0,19:19:29.93:655,30,0	0/0:15,0:15:45.15:0,45,1454	0/0:36,0:36:99:0,105,3377	0/0:30,0:30:90.29:0,90,2802	0/0:4,0:4:12.04:0,12,387
chr10	78625257	.	G	GC	2862.66	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-0.170;DP=687;FS=0.000;HRun=7;HaplotypeScore=80.5725;InbreedingCoeff=0.9916;MQ=87.17;MQ0=0;MQRankSum=-0.919;QD=26.02;ReadPosRankSum=-0.074;VQSLOD=3.9530;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,36:40:99:1193,102,0	0/0:9,0:9:21.03:0,21,202	0/0:25,0:25:54.29:0,54,487	0/0:25,0:25:27.83:0,28,342	0/0:24,0:24:60.09:0,60,579	1/1:2,16:18:39.12:470,39,0	1/1:4,13:17:39.12:471,39,0	0/0:31,0:31:57.08:0,57,549	0/0:16,0:16:42.06:0,42,404	0/0:31,0:31:84.13:0,84,811	0/0:25,0:25:72.11:0,72,692	0/0:24,0:24:66.08:0,66,631	0/0:34,0:34:93.14:0,93,898	0/0:26,0:26:66.10:0,66,637	0/0:20,0:20:57.08:0,57,545	0/0:28,0:27:75.11:0,75,724	0/0:18,0:18:48.08:0,48,463	0/0:15,0:15:39.06:0,39,377	0/0:21,0:21:54.08:0,54,521	0/0:25,0:25:66.08:0,66,631	0/0:36,0:36:96.13:0,96,921	0/0:28,0:28:72.10:0,72,693	0/0:29,0:29:75.11:0,75,724	0/0:37,0:37:93.14:0,93,898	0/0:21,0:21:60.10:0,60,579	1/1:6,22:28:40.22:757,40,0	0/0:29,0:27:84.10:0,84,798	1/1:3,4:7:12.04:145,12,0
chr10	78626647	.	A	AC	9920.61	PASS	AB=0.900;AC=17;AF=0.304;AN=56;BaseQRankSum=-5.821;DP=748;FS=5.999;HRun=2;HaplotypeScore=77.8827;InbreedingCoeff=0.9154;MQ=85.30;MQ0=0;MQRankSum=-7.585;QD=41.34;ReadPosRankSum=1.604;VQSLOD=4.7621;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,58:58:99:2637,166,0	0/0:12,0:12:36.12:0,36,504	0/0:24,0:24:53.94:0,54,810	0/0:22,0:22:53.31:0,53,767	0/0:28,0:28:84.28:0,84,1175	1/1:0,16:16:45.15:719,45,0	1/1:0,22:22:63.21:1007,63,0	0/0:29,0:29:84.28:0,84,1173	0/0:34,0:34:99:0,102,1427	0/0:32,0:32:93.31:0,93,1299	0/0:30,0:30:90.27:0,90,1224	1/1:0,19:19:51.17:815,51,0	1/1:0,23:23:69.24:1103,69,0	0/0:30,0:30:90.29:0,90,1241	0/0:27,0:27:81.23:0,81,1110	0/0:18,0:18:54.18:0,54,753	0/0:33,0:33:93.31:0,93,1300	0/1:16,2:18:41.77:42,0,610	0/0:14,0:14:39.13:0,39,546	0/0:35,0:35:99:0,105,1466	0/0:54,0:54:99:0,160,2224	1/1:0,27:27:69.24:1103,69,0	1/1:0,21:21:54.18:863,54,0	1/1:1,35:36:99:1630,102,0	0/0:24,0:24:72.22:0,72,985	0/0:28,0:28:84.28:0,84,1175	0/0:24,0:23:72.24:0,72,1006	0/0:10,0:10:30.08:0,30,400
chr10	78627532	.	CTA	C	7713.52	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=17.679;DP=656;FS=6.158;HRun=0;HaplotypeScore=96.9929;InbreedingCoeff=0.9945;MQ=91.02;MQ0=0;MQRankSum=-2.450;QD=38.38;ReadPosRankSum=4.655;VQSLOD=6.9948;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:40:96.28:1443,96,0	0/0:9,0:9:26.94:0,27,445	0/0:27,0:28:83.59:0,84,1485	0/0:24,0:24:66.19:0,66,1205	0/0:16,0:16:45.15:0,45,865	1/1:0,20:20:57.19:873,57,0	1/1:0,27:27:60.16:888,60,0	0/0:33,0:33:96.26:0,96,1694	0/0:23,0:23:69.24:0,69,1332	0/0:35,0:35:99:0,105,1969	0/0:11,0:11:33.11:0,33,625	1/1:1,27:28:75.25:1148,75,0	1/1:0,29:29:84.22:1236,84,0	0/0:36,0:36:99:0,108,2025	0/0:35,0:35:99:0,105,1961	0/0:26,0:26:78.27:0,78,1506	0/0:24,0:24:72.25:0,72,1377	0/0:18,0:18:54.18:0,54,1024	0/0:11,0:11:30.08:0,30,487	0/0:15,0:15:45.15:0,45,855	0/0:38,0:38:99:0,114,2152	1/1:0,16:16:39.03:544,39,0	1/1:1,16:17:42.14:643,42,0	1/1:1,23:24:63.10:938,63,0	0/0:16,0:16:45.15:0,45,869	0/0:25,0:25:72.25:0,72,1361	0/0:28,0:26:84.29:0,84,1582	0/0:4,0:4:12.04:0,12,230
chr10	78627840	.	GAGGAAA	G	716.14	PASS	AB=0.969;AC=24;AF=0.462;AN=52;BaseQRankSum=4.414;DP=247;FS=4.322;HRun=0;HaplotypeScore=50.7612;InbreedingCoeff=0.2145;MQ=70.68;MQ0=6;MQRankSum=-7.404;QD=5.78;ReadPosRankSum=-1.437;VQSLOD=0.7673;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:15:21:202,21,0	0/1:5,0:5:32.71:33,0,36	0/0:25,0:13:17.02:0,17,490	0/0:20,0:13:35.48:0,35,793	0/0:11,0:11:24.08:0,24,555	1/1:4,0:4:3.01:38,3,0	1/1:8,0:8:8.92:90,9,0	0/0:13,0:13:30.05:0,30,592	0/1:14,0:14:41.40:41,0,711	0/1:4,2:6:30.45:30,0,105	0/0:5,0:5:15.04:0,15,336	1/1:7,0:6:1.83:99,2,0	1/1:5,0:4:3.01:34,3,0	0/0:6,0:6:12.04:0,12,247	0/1:6,0:5:6.86:7,0,206	0/1:7,0:7:36.69:37,0,154	0/0:7,0:7:21.06:0,21,454	0/1:10,0:10:41.57:42,0,437	0/0:6,0:6:12.04:0,12,348	0/0:4,0:3:9.03:0,9,317	0/0:20,0:20:2.09:0,2,1231	./.	1/1:6,0:6:0.27:1,0,0	1/1:12,0:9:14.90:176,15,0	0/1:5,0:5:8.88:9,0,305	0/1:7,0:7:2.46:2,0,293	1/1:5,0:5:3.01:40,3,0	./.
chr10	78629172	.	C	CATAG	5492.11	PASS	AB=1.000;AC=42;AF=0.840;AN=50;BaseQRankSum=-0.331;DP=598;FS=3.278;HRun=0;HaplotypeScore=146.3496;InbreedingCoeff=0.2648;MQ=65.47;MQ0=5;MQRankSum=-3.533;QD=10.13;ReadPosRankSum=0.389;VQSLOD=3.7923;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,1:33:17.81:288,18,0	0/0:7,0:6:12.02:0,12,118	./.	./.	1/1:23,0:23:5.47:63,5,0	1/1:21,0:21:18.06:305,18,0	1/1:11,0:11:5.95:65,6,0	1/1:45,0:44:24.97:162,25,0	0/0:18,0:18:30.02:0,30,351	1/1:24,0:34:23.88:308,24,0	1/1:17,0:17:3:25,3,0	1/1:23,0:23:24.05:391,24,0	1/1:13,0:13:15.05:225,15,0	1/1:12,0:19:3.01:52,3,0	1/1:16,5:21:27.09:583,27,0	1/1:4,1:21:12.04:207,12,0	1/1:6,8:14:15.05:314,15,0	1/1:12,10:23:21.07:458,21,0	0/1:21,0:21:30.98:31,0,87	0/1:38,0:38:36.51:37,0,262	0/1:15,0:15:27.49:27,0,124	1/1:27,0:27:30.06:489,30,0	1/1:28,1:29:27:331,27,0	1/1:11,0:10:2.30:49,2,0	1/1:12,18:29:30.10:695,30,0	1/1:22,0:22:24.80:336,25,0	0/1:28,0:28:51.73:52,0,178	./.
chr10	78629192	.	G	GATAGATAGATAG	4346.72	PASS	AB=1.000;AC=37;AF=0.740;AN=50;BaseQRankSum=-0.737;DP=614;FS=4.052;HRun=0;HaplotypeScore=246.6295;InbreedingCoeff=0.3123;MQ=51.43;MQ0=9;MQRankSum=-3.308;QD=8.28;ReadPosRankSum=-1.502;VQSLOD=3.6155;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:8.52:138,9,0	0/0:8,0:7:12.04:0,12,353	./.	./.	1/1:23,0:23:5.25:173,5,0	1/1:29,0:29:7.01:261,7,0	1/1:12,0:12:5.78:82,6,0	1/1:53,0:50:22.88:82,23,0	0/0:21,0:21:30.04:0,30,646	1/1:32,0:32:27.48:460,27,0	1/1:21,0:20:3:25,3,0	1/1:25,0:25:21.52:369,22,0	1/1:15,0:15:12.04:294,12,0	1/1:14,0:14:3.01:76,3,0	1/1:21,0:21:25.02:220,25,0	1/1:23,0:23:9.03:257,9,0	0/1:22,0:21:4.84:25,0,5	0/1:27,0:26:9.51:26,0,10	0/1:24,0:21:10.46:10,0,288	0/1:37,0:37:36.50:36,0,724	0/0:17,0:17:13.92:0,14,379	1/1:21,0:21:18.52:301,19,0	0/1:33,0:31:25.23:455,0,25	1/1:10,0:10:2.91:51,3,0	1/1:34,0:34:18.56:65,19,0	1/1:14,8:23:27.09:939,27,0	0/0:26,0:26:2.08:0,2,601	./.
chr10	78629218	.	T	TAGATAGAC	6219.16	PASS	AB=0.997;AC=27;AF=0.500;AN=54;BaseQRankSum=-5.543;DP=652;FS=1.576;HRun=0;HaplotypeScore=224.6660;InbreedingCoeff=0.1316;MQ=50.82;MQ0=7;MQRankSum=0.480;QD=12.74;ReadPosRankSum=-0.129;VQSLOD=3.9220;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,2:29:24.90:515,25,0	0/0:11,0:10:21.03:0,21,305	0/0:9,0:8:18.02:0,18,189	./.	0/1:21,0:21:79.24:118,0,79	1/1:29,0:31:59.69:713,60,0	1/1:13,0:13:26.69:268,27,0	0/1:56,0:53:71.09:71,0,569	0/0:22,0:22:62.99:0,63,842	0/1:33,0:33:99:143,0,490	0/0:22,0:21:4.98:0,5,200	1/1:25,5:30:63:981,63,0	1/1:18,1:19:44.92:511,45,0	0/1:16,0:16:79.51:80,0,149	0/1:24,0:24:99:206,0,281	0/1:23,0:23:99:282,0,124	0/1:22,0:21:46.73:47,0,135	0/1:24,0:23:74.77:75,0,173	0/0:22,0:20:8.07:0,8,521	0/0:40,0:41:17.27:0,17,929	0/0:21,0:21:5.48:0,5,506	1/1:23,2:25:45.05:883,45,0	1/1:24,1:26:43.32:645,43,0	1/1:10,1:11:11.99:191,12,0	0/1:36,0:36:99:106,0,308	0/1:24,0:24:99:370,0,274	0/1:22,0:21:13.22:13,0,578	0/0:11,0:11:11.92:0,12,91
chr10	78629233	.	A	AC	64.78	PASS	AB=0.905;AC=6;AF=0.107;AN=56;BaseQRankSum=7.974;DP=647;FS=7.888;HRun=0;HaplotypeScore=164.7348;InbreedingCoeff=-0.1175;MQ=51.28;MQ0=6;MQRankSum=-4.082;QD=0.49;ReadPosRankSum=-6.235;VQSLOD=-0.3421;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:26,2:28:9.50:9,0,492	0/0:13,0:12:24.08:0,24,335	0/0:16,0:14:17.31:0,17,442	0/0:10,0:6:12.04:0,12,163	0/1:16,8:22:58.40:58,0,306	0/0:29,0:29:23.01:0,23,829	0/0:13,0:13:16.97:0,17,364	0/0:42,0:40:99:0,112,1520	0/0:23,0:23:69.23:0,69,964	0/0:35,0:35:50.37:0,50,1216	0/0:21,1:21:36.12:0,36,503	0/0:31,0:31:14.68:0,15,718	0/0:17,1:18:29.24:0,29,444	0/0:18,0:18:23.06:0,23,470	0/0:24,0:24:65.91:0,66,887	0/1:18,0:18:25.67:26,0,303	0/0:21,0:20:42.14:0,42,587	0/0:23,0:23:58.98:0,59,781	0/0:23,0:22:66.22:0,66,922	0/0:41,0:41:99:0,107,1507	0/0:17,0:17:51.17:0,51,713	0/1:21,4:25:52.12:52,0,337	0/1:24,1:23:7.37:7,0,286	0/1:11,1:12:31.27:31,0,152	0/0:34,0:34:81.27:0,81,1120	0/0:22,0:21:42.96:0,43,741	0/0:26,0:25:78.24:0,78,1072	0/0:11,0:11:27.05:0,27,355
chr10	78629313	.	GTAGA	G	3583.49	PASS	AB=0.714;AC=15;AF=0.268;AN=56;BaseQRankSum=10.252;DP=609;FS=5.949;HRun=0;HaplotypeScore=114.8954;InbreedingCoeff=0.8882;MQ=55.14;MQ0=1;MQRankSum=0.628;QD=28.67;ReadPosRankSum=1.901;VQSLOD=3.5011;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,7:14:27.09:451,27,0	0/0:13,0:13:36.12:0,36,847	0/0:20,0:15:30.10:0,30,655	0/0:7,0:5:9.03:0,9,180	0/0:36,0:36:96.31:0,96,2243	1/1:1,20:21:36.12:588,36,0	0/1:3,2:4:18.03:46,0,18	0/0:38,0:38:81.26:0,81,1834	0/0:21,0:21:51.17:0,51,1187	0/0:39,0:39:96.33:0,96,2206	0/0:27,0:27:63.20:0,63,1502	1/1:3,16:19:39.13:639,39,0	1/1:1,12:13:30.10:499,30,0	0/0:15,0:15:30.06:0,30,668	0/0:25,0:25:57.20:0,57,1435	0/0:23,0:23:54.19:0,54,1319	0/0:26,0:26:63.21:0,63,1540	0/0:18,0:18:42.11:0,42,972	0/0:20,0:20:42.14:0,42,886	0/0:34,0:34:75.26:0,75,1729	0/0:21,0:21:60.21:0,60,1420	1/1:3,14:17:30.10:483,30,0	1/1:1,22:23:42.13:672,42,0	1/1:3,9:13:11.56:206,12,0	0/0:19,0:19:48.16:0,48,1150	0/0:34,0:34:87.24:0,87,1891	0/0:38,2:40:21.33:0,21,2014	0/0:6,0:6:12.04:0,12,299
chr10	78629442	.	TTG	T	1116.52	PASS	AB=0.564;AC=10;AF=0.179;AN=56;BaseQRankSum=11.490;DP=523;FS=22.492;HRun=0;HaplotypeScore=104.8521;InbreedingCoeff=0.1644;MQ=56.20;MQ0=1;MQRankSum=-1.242;QD=9.00;ReadPosRankSum=4.767;VQSLOD=1.6775;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:4,10:14:68.91:69,0,83	0/0:7,0:7:21.07:0,21,393	0/0:15,0:11:30.10:0,30,551	0/0:7,0:3:9.03:0,9,182	0/0:22,0:22:63.21:0,63,1173	0/1:4,15:19:99:172,0,106	1/1:3,3:5:6.08:27,6,0	0/0:41,0:41:99:0,123,2240	0/0:19,0:19:57.20:0,57,1123	0/0:28,0:28:84.28:0,84,1620	0/0:20,0:20:60.19:0,60,1149	0/1:2,14:16:21.85:223,0,22	0/1:3,17:20:34.70:243,0,35	0/0:15,0:15:45.15:0,45,879	0/0:22,0:22:66.19:0,66,1215	0/0:18,0:18:54.15:0,54,1022	0/0:23,0:23:66.23:0,66,1286	0/0:18,1:19:47.50:0,48,991	0/0:12,0:12:36.10:0,36,640	0/0:35,0:35:99:0,105,2000	0/0:11,0:11:27.09:0,27,531	0/1:3,10:13:59.89:139,0,60	0/1:8,16:24:99:196,0,108	1/1:3,9:12:3.06:190,3,0	0/0:16,0:16:48.16:0,48,942	0/0:31,0:31:93.32:0,93,1770	0/0:27,0:27:66.15:0,66,1273	0/0:11,0:9:24.08:0,24,470
chr10	78629495	.	T	TGATA	4057.65	PASS	AB=0.640;AC=42;AF=0.750;AN=56;BaseQRankSum=7.225;DP=570;FS=2.833;HRun=0;HaplotypeScore=216.3244;InbreedingCoeff=0.4905;MQ=44.98;MQ0=8;MQRankSum=-2.014;QD=8.80;ReadPosRankSum=2.813;VQSLOD=2.7162;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:14:0.88:2,1,0	1/1:9,0:11:2.50:9,2,0	0/0:11,0:4:3.01:0,3,40	0/0:9,0:2:6.02:0,6,87	1/1:19,0:19:1.25:3,1,0	1/1:15,0:15:4.31:14,4,0	1/1:6,0:5:2.60:10,3,0	1/1:33,0:29:26.93:318,27,0	0/0:25,0:25:54.17:0,54,843	1/1:27,0:28:42.19:555,42,0	1/1:19,0:22:7.10:90,7,0	1/1:12,0:12:3.56:13,4,0	1/1:15,0:15:1.24:3,1,0	0/0:22,0:22:51.17:0,51,816	1/1:21,0:22:2.99:23,3,0	1/1:17,0:19:15.01:157,15,0	0/0:22,0:22:21.32:0,21,334	0/0:18,0:20:29.30:0,29,556	0/1:6,5:9:11.96:287,0,12	0/1:10,19:32:16.79:271,0,17	1/1:3,11:16:14.92:357,15,0	1/1:23,0:23:2.13:6,2,0	1/1:22,0:21:1.24:3,1,0	1/1:14,0:14:6.89:19,7,0	1/1:21,0:23:3.01:42,3,0	1/1:34,0:35:53.78:421,54,0	1/1:10,30:41:60.06:1380,60,0	1/1:14,0:12:8.90:73,9,0
chr10	78629517	.	A	ATAT	1944.48	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=7.407;DP=572;FS=22.329;HRun=0;HaplotypeScore=219.1577;InbreedingCoeff=0.7670;MQ=47.90;MQ0=3;MQRankSum=-3.458;QD=12.88;ReadPosRankSum=0.868;VQSLOD=1.7218;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,5:12:17.77:202,18,0	0/0:9,0:9:8.90:0,9,163	0/0:13,0:5:14.84:0,15,195	0/0:10,0:6:6.02:0,6,102	0/0:28,0:23:17.42:0,17,343	1/1:3,11:14:35.82:390,36,0	1/1:2,2:4:3.01:69,3,0	0/0:40,0:36:99:0,102,1687	0/0:25,0:25:69.24:0,69,1165	0/0:32,0:29:15.37:0,15,646	0/0:27,0:26:35.83:0,36,664	1/1:5,5:10:15.02:235,15,0	1/1:2,7:9:20.88:210,21,0	0/0:25,0:25:69.24:0,69,1187	0/0:27,0:24:8.90:0,9,148	0/0:22,0:22:34.85:0,35,581	0/0:26,0:26:53.50:0,54,801	0/0:18,0:18:43.28:0,43,677	0/0:12,0:11:11.06:0,11,300	0/0:30,0:30:13.71:0,14,350	0/1:17,0:17:1.57:2,0,57	1/1:1,18:19:38.83:428,39,0	1/1:5,14:19:20.82:241,21,0	1/1:3,6:9:15.05:347,15,0	0/0:27,0:26:5.83:0,6,73	0/0:35,0:32:81.09:0,81,1139	0/1:38,0:38:17.76:18,0,103	0/0:15,0:13:17.43:0,17,256
chr10	78629529	.	ATG	A	1168.76	PASS	AB=0.792;AC=14;AF=0.250;AN=56;BaseQRankSum=6.394;DP=555;FS=7.580;HRun=0;HaplotypeScore=206.4354;InbreedingCoeff=-0.1462;MQ=46.60;MQ0=3;MQRankSum=-6.694;QD=3.92;ReadPosRankSum=-0.174;VQSLOD=2.0945;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:0.92:0,1,39	0/1:8,4:11:36.99:37,0,78	0/0:13,1:6:17.73:0,18,267	0/0:6,0:5:2.61:0,3,28	0/1:18,12:25:21.96:22,0,326	0/0:10,0:10:6:0,6,65	0/0:3,0:3:3.01:0,3,38	0/0:43,0:36:73.32:0,73,1647	0/0:24,0:24:69.24:0,69,1332	0/1:22,12:31:99:368,0,596	0/1:20,7:26:11.38:11,0,469	0/0:7,0:7:6.01:0,6,65	0/0:7,0:7:8.25:0,8,52	0/0:27,0:27:72.24:0,72,1361	1/1:22,9:27:2.16:22,2,0	0/1:10,8:18:63.21:63,0,342	0/1:21,3:24:7.81:8,0,777	0/0:14,2:16:13.51:0,14,642	0/1:10,0:9:27.62:28,0,186	0/0:31,0:31:42.12:0,42,629	0/0:17,0:17:7.27:0,7,211	0/0:19,0:19:8.65:0,9,72	0/0:16,0:16:5.63:0,6,43	0/0:7,0:8:15.03:0,15,154	1/1:16,11:26:2.85:42,3,0	0/1:19,16:31:99:566,0,459	0/1:35,0:35:51.09:51,0,511	0/1:7,8:13:93.18:97,0,93
chr10	78629542	.	CATAG	C	5672.83	PASS	AB=0.917;AC=34;AF=0.654;AN=52;BaseQRankSum=5.637;DP=552;FS=1.848;HRun=0;HaplotypeScore=199.8312;InbreedingCoeff=0.6031;MQ=47.47;MQ0=9;MQRankSum=-2.693;QD=14.66;ReadPosRankSum=-1.993;VQSLOD=4.3277;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,2:10:5.18:53,0,5	1/1:8,3:10:6.02:100,6,0	0/0:14,0:7:8.01:0,8,81	0/1:6,0:4:0:0,0,0	1/1:26,7:26:21.07:350,21,0	0/0:9,1:10:2.04:0,2,6	./.	1/1:35,2:31:44.98:493,45,0	0/0:26,0:26:69.21:0,69,1550	1/1:13,26:37:58.89:936,59,0	1/1:21,6:26:30.10:500,30,0	0/0:5,2:7:0:0,0,0	1/1:3,5:6:6.02:99,6,0	0/0:28,0:27:16.65:0,17,1448	0/0:11,16:23:0:0,0,0	1/1:18,3:21:23.56:361,24,0	1/1:23,2:25:33.70:610,34,0	0/0:18,0:18:35.46:0,35,654	1/1:9,1:9:14.95:181,15,0	1/1:26,7:33:32.93:521,33,0	1/1:14,0:14:6.02:100,6,0	1/1:8,7:15:3:50,3,0	1/1:11,5:15:3:50,3,0	./.	0/0:11,15:25:0:0,0,0	1/1:28,8:32:9.22:733,9,0	1/1:27,7:34:29.37:408,29,0	1/1:10,2:12:2.98:130,3,0
chr10	78629543	.	A	ATG	487.10	PASS	AB=0.927;AC=6;AF=0.107;AN=56;BaseQRankSum=5.957;DP=553;FS=0.857;HRun=0;HaplotypeScore=209.3178;InbreedingCoeff=0.0778;MQ=47.26;MQ0=9;MQRankSum=-5.421;QD=3.16;ReadPosRankSum=-1.854;VQSLOD=2.1935;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:0.80:1,0,61	0/0:8,3:10:6.02:0,6,69	0/0:15,0:7:15.02:0,15,205	0/0:7,0:4:1.25:0,1,3	0/0:33,0:26:20.73:0,21,239	0/0:10,0:10:3.32:0,3,44	0/0:3,0:3:2.80:0,3,46	0/0:37,0:31:84.19:0,84,1171	0/0:25,0:25:75.24:0,75,1128	0/1:39,0:37:24.49:24,0,394	0/0:27,0:26:29.92:0,30,342	0/0:6,0:6:2.51:0,3,46	0/0:9,0:7:8.81:0,9,90	0/0:28,0:27:75.25:0,75,1133	0/1:28,0:24:0.01:0,0,0	0/0:21,0:21:5.54:0,6,222	0/0:25,0:25:50.59:0,51,539	0/0:18,0:18:44.85:0,45,618	0/0:10,0:9:23.09:0,23,267	0/0:33,0:33:44.59:0,45,537	0/0:13,0:13:14.88:0,15,206	0/0:15,0:15:8.35:0,8,113	0/0:17,0:15:5.83:0,6,68	0/0:6,0:6:15.03:0,15,207	0/1:26,0:25:0:0,0,0	0/1:26,12:34:99:460,0,474	0/0:30,0:30:48.20:0,48,585	0/1:9,3:12:71.10:99,0,71
chr10	78629606	.	TAG	T	81.89	PASS	AB=0.561;AC=8;AF=0.160;AN=50;BaseQRankSum=6.018;DP=508;FS=0.968;HRun=0;HaplotypeScore=141.4948;InbreedingCoeff=0.6835;MQ=49.46;MQ0=28;MQRankSum=-3.400;QD=1.36;ReadPosRankSum=3.227;VQSLOD=2.4163;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,3:8:2.45:0,2,8	0/0:10,0:9:24.08:0,24,427	./.	./.	0/0:33,0:29:68.04:0,68,1020	1/1:2,10:12:5.99:81,6,0	./.	0/0:37,0:25:66.20:0,66,916	0/0:15,0:15:45.15:0,45,703	0/0:42,0:42:99:0,124,1964	0/0:23,0:23:63.19:0,63,1109	1/1:4,6:9:6.01:67,6,0	0/1:2,14:14:0:0,0,0	0/0:20,0:19:57.17:0,57,834	0/0:18,0:16:15.03:0,15,260	0/0:30,0:30:63.17:0,63,977	0/0:25,0:25:57.12:0,57,956	0/0:31,0:31:51.44:0,51,837	0/0:11,0:9:21.06:0,21,342	0/0:36,0:36:93.24:0,93,1580	0/0:15,0:15:36.12:0,36,580	0/1:3,7:7:0:0,0,0	1/1:4,8:9:2.94:44,3,0	0/0:1,2:3:0:0,0,0	0/0:23,0:23:54.16:0,54,857	0/0:31,0:30:17.63:0,18,748	0/0:20,0:20:49.05:0,49,765	0/0:7,0:6:6.18:0,6,121
chr10	78629636	.	AACAG	A	2053.26	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.467;DP=553;FS=6.815;HRun=0;HaplotypeScore=135.0306;InbreedingCoeff=0.9743;MQ=55.86;MQ0=15;MQRankSum=-9.218;QD=18.50;ReadPosRankSum=-9.710;VQSLOD=0.2428;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:5,6:11:20.36:172,20,0	0/0:10,0:10:30.10:0,30,737	0/0:19,0:16:48.16:0,48,1147	0/0:6,0:6:15.05:0,15,315	0/0:37,0:33:93.31:0,93,2205	1/1:3,12:15:38.76:380,39,0	1/1:2,7:8:8.90:60,9,0	0/0:38,0:34:93.22:0,93,2111	0/0:13,0:13:30.10:0,30,740	0/0:39,0:39:99:0,111,2593	0/0:26,0:25:75.26:0,75,1880	1/1:3,11:13:32.90:414,33,0	1/1:4,12:15:32.63:219,33,0	0/0:14,0:14:39.11:0,39,917	0/0:15,0:13:32.73:0,33,763	0/0:22,0:22:57.18:0,57,1353	0/0:23,0:23:49.34:0,49,1170	0/0:26,0:26:63.14:0,63,1354	0/0:15,0:13:33.11:0,33,787	0/0:31,0:31:87.27:0,87,2089	0/0:18,0:18:51.16:0,51,1199	1/1:6,15:17:41.84:510,42,0	1/1:6,13:16:35.75:442,36,0	1/1:0,6:6:8.87:60,9,0	0/0:27,0:27:81.28:0,81,2040	0/0:31,0:31:92.96:0,93,1799	0/0:25,0:25:72.25:0,72,1663	0/0:7,0:7:17.09:0,17,333
chr10	78629705	.	T	TGACAGACA	5216.47	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-1.785;DP=592;FS=26.322;HRun=0;HaplotypeScore=161.0498;InbreedingCoeff=0.9410;MQ=69.54;MQ0=0;MQRankSum=-8.423;QD=39.52;ReadPosRankSum=-4.156;VQSLOD=2.3743;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,1:11:3.01:48,3,0	0/0:13,0:13:33.11:0,33,810	0/0:22,0:22:39.12:0,39,928	0/0:23,0:23:44.53:0,45,931	0/0:28,0:28:75.23:0,75,1848	1/1:11,5:16:33.05:1069,33,0	1/1:10,4:14:17.92:362,18,0	0/0:33,0:33:69.21:0,69,1590	0/0:20,0:20:51.15:0,51,1186	0/0:28,0:27:69.22:0,69,1659	0/0:26,0:26:63.10:0,63,1457	1/1:5,9:16:21.07:846,21,0	1/1:3,7:12:24.08:939,24,0	0/0:14,0:14:36.11:0,36,842	0/0:16,0:14:30.10:0,30,767	0/0:20,0:20:48.16:0,48,1268	0/0:21,0:21:54.19:0,54,1398	0/0:18,0:18:39.13:0,39,1021	0/0:17,0:17:36.12:0,36,869	0/0:28,0:28:66.21:0,66,1551	0/0:26,0:26:69.21:0,69,1688	1/1:16,12:28:30.08:824,30,0	1/1:14,11:25:29.84:939,30,0	1/1:9,1:10:9.50:190,10,0	0/0:33,0:33:84.26:0,84,2048	0/0:36,0:35:81.26:0,81,2009	0/0:35,0:35:81.28:0,81,2108	0/0:3,0:3:6:0,6,103
chr10	78630274	.	AG	A	6766.20	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.732;DP=720;FS=1.765;HRun=3;HaplotypeScore=129.5727;InbreedingCoeff=0.9992;MQ=86.27;MQ0=0;MQRankSum=-4.333;QD=32.53;ReadPosRankSum=1.643;VQSLOD=4.1453;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,47:50:99:1635,132,0	0/0:16,0:16:45.15:0,45,648	0/0:26,0:26:64.67:0,65,886	0/0:22,0:22:59.29:0,59,804	0/0:21,0:21:60.19:0,60,845	1/1:1,19:20:48.15:595,48,0	1/1:0,19:19:51.16:632,51,0	0/0:26,0:26:75.22:0,75,1042	0/0:27,0:27:81.23:0,81,1104	0/0:32,0:32:90.30:0,90,1296	0/0:17,0:17:51.14:0,51,698	1/1:2,21:23:63.20:781,63,0	1/1:1,27:28:78.25:967,78,0	0/0:19,1:20:23.10:0,23,782	0/0:26,0:26:75.24:0,75,1062	0/0:30,0:30:90.28:0,90,1262	0/0:35,0:35:99:0,105,1494	0/0:12,0:12:33.11:0,33,469	0/0:27,0:27:81.24:0,81,1129	0/0:22,0:22:66.22:0,66,949	0/0:59,0:59:99:0,178,2547	1/1:0,20:20:54.17:669,54,0	1/1:0,12:12:36.11:446,36,0	1/1:0,36:36:84.26:1041,84,0	0/0:21,0:21:63.21:0,63,907	0/0:38,0:38:99:0,114,1641	0/0:27,0:27:81.27:0,81,1166	0/0:8,0:8:24.08:0,24,346
chr10	78630663	.	ACC	A	4884.25	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.306;DP=584;FS=5.858;HRun=6;HaplotypeScore=93.9818;InbreedingCoeff=0.9894;MQ=90.17;MQ0=0;MQRankSum=-3.054;QD=33.45;ReadPosRankSum=1.775;VQSLOD=4.4686;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,34:39:87.18:1115,87,0	0/0:10,0:10:27.09:0,27,466	0/0:29,0:28:78.27:0,78,1384	0/0:21,0:21:57.17:0,57,899	0/0:27,0:27:75.26:0,75,1350	1/1:1,15:16:45.13:600,45,0	1/1:3,17:20:47.70:639,48,0	0/0:23,0:23:66.19:0,66,1135	0/0:22,0:22:63.22:0,63,1134	0/0:15,0:15:42.13:0,42,702	0/0:8,0:8:24.08:0,24,426	1/1:1,13:14:36.11:472,36,0	1/1:0,20:20:60.20:800,60,0	0/0:28,0:28:78.27:0,78,1396	0/0:22,0:22:66.18:0,66,1154	0/0:19,0:19:54.18:0,54,946	0/0:29,0:29:78.27:0,78,1405	0/0:24,0:24:66.20:0,66,1156	0/0:25,0:25:72.23:0,72,1238	0/0:19,0:19:54.17:0,54,943	0/0:39,0:39:99:0,111,1997	1/1:1,13:14:39.09:500,39,0	1/1:1,12:13:33.11:438,33,0	1/1:2,8:10:24.08:320,24,0	0/0:21,0:21:60.20:0,60,1053	0/0:22,0:22:63.22:0,63,1127	0/0:32,0:32:87.28:0,87,1509	0/0:3,0:3:9.03:0,9,162
chr10	78631011	.	TAA	T	1119.32	PASS	AB=0.671;AC=7;AF=0.125;AN=56;BaseQRankSum=9.390;DP=542;FS=129.711;HRun=2;HaplotypeScore=89.0869;InbreedingCoeff=-0.1472;MQ=80.50;MQ0=0;MQRankSum=-9.303;QD=15.13;ReadPosRankSum=1.686;VQSLOD=0.2206;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,6:13:99:217,0,234	0/0:10,0:10:30.10:0,30,569	0/0:16,0:16:48.13:0,48,829	0/0:15,0:15:39.08:0,39,681	0/0:32,0:32:96.31:0,96,1780	0/1:8,4:12:99:134,0,399	0/1:5,5:10:99:178,0,232	0/0:24,0:24:72.22:0,72,1306	0/0:23,0:23:69.24:0,69,1287	0/0:25,0:25:75.26:0,75,1423	0/0:11,0:11:33.11:0,33,624	0/1:8,7:15:99:248,0,359	0/1:8,4:12:99:133,0,403	0/0:24,0:24:72.25:0,72,1359	0/0:36,0:36:99:0,105,1974	0/0:24,0:24:72.25:0,72,1356	0/0:33,0:33:99:0,99,1871	0/0:18,0:18:51.17:0,51,967	0/0:27,0:27:78.25:0,78,1390	0/0:19,0:19:57.18:0,57,1049	0/0:34,0:34:99:0,102,1926	0/1:2,7:9:78.23:265,0,78	0/1:1,2:3:26.76:75,0,27	0/0:2,2:4:5.76:0,6,73	0/0:22,0:22:66.23:0,66,1245	0/0:21,0:21:63.22:0,63,1192	0/0:31,0:31:93.32:0,93,1738	0/0:19,0:19:57.20:0,57,1070
chr10	78631016	.	TTG	T	626.54	PASS	AB=0.675;AC=7;AF=0.125;AN=56;BaseQRankSum=9.266;DP=540;FS=113.428;HRun=0;HaplotypeScore=93.1339;InbreedingCoeff=-0.1462;MQ=75.43;MQ0=0;MQRankSum=-8.883;QD=8.24;ReadPosRankSum=1.185;VQSLOD=-0.7367;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,6:13:99:139,0,231	0/0:10,0:10:30.10:0,30,556	0/0:13,0:13:39.13:0,39,677	0/0:11,0:11:15.06:0,15,380	0/0:33,0:33:96.33:0,96,1781	0/1:8,4:12:81.28:81,0,414	0/1:5,5:10:99:112,0,233	0/0:25,0:25:75.24:0,75,1355	0/0:23,0:23:69.24:0,69,1301	0/0:29,0:29:87.29:0,87,1612	0/0:14,0:14:39.11:0,39,667	0/1:10,7:17:99:151,0,405	0/1:8,4:12:77.55:78,0,417	0/0:25,0:25:75.26:0,75,1397	0/0:34,0:34:93.29:0,93,1683	0/0:25,0:25:75.26:0,75,1415	0/0:32,0:32:96.33:0,96,1799	0/0:18,0:18:51.16:0,51,924	0/0:23,0:22:69.16:0,69,1170	0/0:19,0:19:57.20:0,57,1052	0/0:35,0:35:99:0,105,1953	0/1:2,7:9:89.19:148,0,89	0/1:1,2:3:47.56:48,0,48	0/0:4,2:6:9.03:0,9,151	0/0:22,0:22:60.18:0,60,1104	0/0:22,0:22:66.23:0,66,1242	0/0:32,0:32:96.27:0,96,1722	0/0:13,0:13:36.12:0,36,653
chr10	78631068	.	A	ACCGTAGAGCATTCT	10644.07	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.165;DP=574;FS=159.939;HRun=0;HaplotypeScore=233.7699;InbreedingCoeff=0.9786;MQ=83.43;MQ0=0;MQRankSum=-12.771;QD=113.23;ReadPosRankSum=-1.001;VQSLOD=1.3687;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,4:19:42.14:2012,42,0	0/0:15,0:15:45.15:0,45,1848	0/0:16,0:15:38.39:0,38,1370	0/0:23,0:23:63.21:0,63,2121	0/0:34,0:34:93.32:0,93,3848	1/1:10,4:14:27.09:1432,27,0	1/1:6,3:10:24.08:1374,24,0	0/0:25,0:25:69.24:0,69,2529	0/0:29,0:29:81.28:0,81,3233	0/0:34,0:34:90.31:0,90,3576	0/0:21,0:21:60.21:0,60,2285	1/1:10,9:19:54.19:2773,54,0	1/1:2,5:9:21.07:1361,21,0	0/0:24,0:24:69.24:0,69,2795	0/0:29,0:29:84.27:0,84,3176	0/0:23,0:23:66.22:0,66,2706	0/0:26,0:26:75.20:0,75,2777	0/0:21,0:21:60.17:0,60,2454	0/0:17,0:17:51.16:0,51,1943	0/0:29,0:29:81.28:0,81,3235	0/0:30,0:30:90.29:0,90,3445	1/1:1,3:4:9.03:633,9,0	1/1:3,3:6:12.04:369,12,0	1/1:7,3:13:12.04:689,12,0	0/0:15,0:15:45.15:0,45,1889	0/0:21,0:21:60.21:0,60,2471	0/0:35,0:35:99:0,105,4392	0/0:13,0:13:39.13:0,39,1375
chr10	78631178	.	G	GA	5133.85	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=17.394;DP=715;FS=14.860;HRun=9;HaplotypeScore=108.8027;InbreedingCoeff=0.9995;MQ=81.18;MQ0=0;MQRankSum=-7.353;QD=26.06;ReadPosRankSum=-2.228;VQSLOD=3.1434;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:30:69.02:736,69,0	0/0:15,0:15:38.96:0,39,334	0/0:20,0:20:31.97:0,32,264	0/0:32,0:31:34.43:0,34,359	0/0:27,0:27:65.96:0,66,569	1/1:2,26:28:75.20:825,75,0	1/1:4,21:25:63.17:695,63,0	0/0:34,0:34:77.91:0,78,667	0/0:27,0:28:68:0,68,575	0/0:38,0:38:89.96:0,90,779	0/0:28,1:29:50.60:0,51,601	1/1:4,18:22:48.09:517,48,0	1/1:7,25:32:78.20:852,78,0	0/0:25,0:25:50.89:0,51,431	0/0:30,1:31:38.78:0,39,566	0/0:30,0:30:77.95:0,78,673	0/0:17,0:17:50.99:0,51,443	0/0:21,0:21:53.96:0,54,464	0/0:18,0:18:47.99:0,48,417	0/0:29,0:29:71.96:0,72,625	0/0:19,0:19:53.97:0,54,465	1/1:0,19:20:57.05:613,57,0	1/1:2,15:17:42.11:465,42,0	1/1:6,17:23:39.11:431,39,0	0/0:26,1:28:31.82:0,32,494	0/0:36,0:37:99:0,104,888	0/0:29,0:29:74.96:0,75,651	0/0:10,0:10:23.96:0,24,204
chr10	78631281	.	G	GT	5987.25	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=17.701;DP=679;FS=2.464;HRun=4;HaplotypeScore=104.9187;InbreedingCoeff=0.9985;MQ=88.92;MQ0=0;MQRankSum=-11.862;QD=32.54;ReadPosRankSum=0.777;VQSLOD=4.6893;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:31:72.03:903,72,0	0/0:13,0:13:33.09:0,33,374	0/0:33,0:33:90.09:0,90,974	0/0:21,0:21:51.01:0,51,537	0/0:31,0:29:81.20:0,81,905	1/1:5,30:34:84.14:1076,84,0	1/1:2,25:27:72.02:874,72,0	0/0:38,0:38:99:0,105,1175	0/0:21,0:21:60.17:0,60,680	0/0:21,0:21:60.17:0,60,681	0/0:16,0:16:44.90:0,45,478	1/1:2,17:19:51.10:673,51,0	1/1:2,30:32:90.23:1192,90,0	0/0:24,0:24:66.17:0,66,739	0/0:34,0:34:99:0,102,1136	0/0:28,0:28:78.20:0,78,875	0/0:23,0:23:63.18:0,63,714	0/0:20,0:20:54.15:0,54,612	0/0:30,0:30:81.23:0,81,917	0/0:27,0:27:74.94:0,75,820	0/0:25,0:25:69.19:0,69,781	1/1:1,16:17:45.15:614,45,0	1/1:2,8:10:18.06:246,18,0	1/1:2,11:13:30.10:409,30,0	0/0:28,0:28:81.11:0,81,885	0/0:16,0:16:36.09:0,36,401	0/0:32,0:32:96.24:0,96,1075	0/0:14,0:14:42.09:0,42,463
chr10	78631627	.	TAGTC	T	5581.98	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.992;DP=633;FS=6.442;HRun=0;HaplotypeScore=110.9875;InbreedingCoeff=0.9936;MQ=97.22;MQ0=0;MQRankSum=-14.667;QD=41.35;ReadPosRankSum=0.729;VQSLOD=5.2019;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:48.16:908,48,0	0/0:9,0:9:27.09:0,27,721	0/0:36,0:36:99:0,99,2511	0/0:32,0:32:90.31:0,90,2306	0/0:28,0:28:84.29:0,84,2195	1/1:0,21:21:54.19:1022,54,0	1/1:2,16:17:27.09:511,27,0	0/0:31,0:31:75.24:0,75,1871	0/0:22,0:22:66.23:0,66,1734	0/0:23,0:23:66.23:0,66,1749	0/0:23,0:23:57.19:0,57,1474	1/1:1,18:19:45.11:815,45,0	1/1:6,19:25:51.17:965,51,0	0/0:21,0:21:63.22:0,63,1660	0/0:25,0:25:72.25:0,72,1871	0/0:27,0:27:78.27:0,78,2074	0/0:26,0:26:72.25:0,72,1927	0/0:23,0:23:60.21:0,60,1617	0/0:17,0:17:45.15:0,45,1161	0/0:38,0:38:99:0,111,2994	0/0:26,0:26:75.26:0,75,2007	1/1:4,15:19:45.14:797,45,0	1/1:2,6:8:21.06:347,21,0	1/1:3,5:8:12.04:215,12,0	0/0:19,0:19:57.20:0,57,1538	0/0:33,0:33:99:0,99,2628	0/0:30,0:30:90.26:0,90,2250	0/0:9,0:9:27.09:0,27,728
chr10	78631717	.	AGTGTGTGTGTGT	A	2355.35	PASS	AB=0.909;AC=15;AF=0.278;AN=54;BaseQRankSum=6.804;DP=575;FS=14.348;HRun=0;HaplotypeScore=192.1173;InbreedingCoeff=0.8358;MQ=68.88;MQ0=18;MQRankSum=-6.163;QD=16.94;ReadPosRankSum=0.778;VQSLOD=1.9080;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:24:3.01:74,3,0	0/0:6,0:8:15.05:0,15,765	./.	0/0:38,0:19:0.47:0,0,1	0/0:16,0:23:23.13:0,23,1118	1/1:19,0:21:9.03:251,9,0	1/1:9,0:9:6.01:111,6,0	0/0:28,0:28:12.04:0,12,426	0/0:12,0:12:12.04:0,12,590	0/0:25,0:24:39.13:0,39,1575	0/0:7,0:16:7.52:0,8,290	1/1:10,4:13:12.04:349,12,0	1/1:11,2:15:15.05:438,15,0	0/0:13,0:13:18.06:0,18,799	0/0:18,0:23:35.22:0,35,1331	0/0:12,0:18:24.08:0,24,1086	0/0:17,0:19:33.11:0,33,1421	0/0:16,0:32:27.95:0,28,1111	0/0:16,0:16:21.43:0,21,860	0/0:20,0:20:12.04:0,12,548	0/0:35,0:36:54.19:0,54,2565	1/1:17,4:21:18.05:441,18,0	1/1:14,7:20:30.10:866,30,0	0/1:9,1:10:0:0,0,0	0/0:15,0:18:24.08:0,24,1138	0/0:19,0:20:24.08:0,24,626	0/0:21,0:24:51.18:0,51,2317	0/0:12,0:15:23.47:0,23,574
chr10	78631800	.	G	GA	5812.85	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=15.917;DP=524;FS=9.002;HRun=1;HaplotypeScore=101.7095;InbreedingCoeff=0.9122;MQ=77.87;MQ0=0;MQRankSum=-7.251;QD=33.22;ReadPosRankSum=2.531;VQSLOD=3.8816;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:72.16:1028,72,0	0/0:5,0:5:15.05:0,15,195	0/0:21,0:21:47.36:0,47,529	0/1:21,0:21:22.21:22,0,501	0/0:20,0:20:60.14:0,60,746	1/1:1,15:16:45.15:673,45,0	1/1:2,23:25:69.19:1006,69,0	0/0:24,0:24:66.20:0,66,823	0/0:12,0:12:33.11:0,33,428	0/0:15,0:15:42.12:0,42,521	0/0:18,0:18:51.17:0,51,662	1/1:2,7:9:24.03:333,24,0	1/1:1,9:10:27.05:379,27,0	0/0:17,0:17:51.17:0,51,661	0/0:20,0:20:51.12:0,51,630	0/0:21,0:21:57.16:0,57,712	0/0:24,0:24:66.20:0,66,841	0/0:23,0:23:60.10:0,60,725	0/0:16,0:16:42.11:0,42,507	0/0:22,0:22:60.18:0,60,765	0/0:26,0:26:72.22:0,72,920	1/1:0,26:26:69.17:1006,69,0	1/1:2,24:26:66.18:962,66,0	1/1:1,12:13:27.09:404,27,0	0/0:17,0:17:42.13:0,42,533	0/0:20,0:20:60.19:0,60,767	0/0:18,0:18:54.18:0,54,700	0/0:10,0:10:21.05:0,21,258
chr10	78631934	.	C	CTAAACCAGTGGGT	18557.25	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-0.294;DP=662;FS=20.178;HRun=0;HaplotypeScore=235.3544;InbreedingCoeff=0.9939;MQ=82.28;MQ0=0;MQRankSum=-16.236;QD=110.46;ReadPosRankSum=-1.403;VQSLOD=3.2963;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,12:33:72.25:3886,72,0	0/0:20,0:20:48.16:0,48,1710	0/0:31,0:32:60.19:0,60,1931	0/0:26,0:26:60.21:0,60,2081	0/0:22,0:22:51.17:0,51,1780	1/1:15,8:24:45.15:2748,45,0	1/1:17,3:22:45.07:2293,45,0	0/0:28,0:28:48.14:0,48,1548	0/0:26,0:26:72.23:0,72,2505	0/0:29,0:29:78.27:0,78,2957	0/0:24,0:24:57.18:0,57,2044	1/1:1,6:8:21.07:1322,21,0	1/1:9,9:22:48.16:2630,48,0	0/0:26,0:26:69.22:0,69,2523	0/0:19,0:19:48.16:0,48,1825	0/0:21,0:21:51.18:0,51,1880	0/0:25,0:25:63.20:0,63,2325	0/0:13,0:13:33.11:0,33,1266	0/0:20,0:20:51.13:0,51,1449	0/0:26,0:26:69.21:0,69,2290	0/0:51,0:51:99:0,135,4753	1/1:19,5:24:51.13:2504,51,0	1/1:10,10:21:45.15:2451,45,0	1/1:9,2:14:12.04:723,12,0	0/0:22,0:22:63.19:0,63,2065	0/0:27,0:27:69.23:0,69,2483	0/0:27,0:27:69.24:0,69,2591	0/0:10,0:10:27.09:0,27,997
chr10	78632939	.	T	TA	960.46	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.851;DP=620;FS=2.406;HRun=5;HaplotypeScore=83.6169;InbreedingCoeff=0.9787;MQ=76.14;MQ0=0;MQRankSum=-0.589;QD=29.10;ReadPosRankSum=-0.234;VQSLOD=3.7501;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:96.20:0,96,1016	0/0:9,0:9:27.07:0,27,290	0/0:17,0:17:24.80:0,25,253	0/0:6,0:6:13.85:0,14,133	0/0:31,0:30:90.21:0,90,959	0/0:24,0:24:69.17:0,69,735	0/0:22,0:22:57.14:0,57,611	0/0:29,0:29:72.18:0,72,774	0/0:15,0:15:45.11:0,45,484	0/0:25,0:25:66.15:0,66,704	0/0:20,0:20:54.14:0,54,580	0/0:16,0:16:45.09:0,45,472	0/0:26,0:26:78.19:0,78,836	0/0:12,0:12:36.09:0,36,387	0/0:20,0:20:60.14:0,60,637	0/0:20,0:20:60.14:0,60,638	0/0:24,0:24:72.18:0,72,774	0/0:15,0:15:39.01:0,39,395	0/0:23,0:23:63.16:0,63,677	0/0:33,0:33:93.23:0,93,999	0/0:9,0:9:24.06:0,24,258	0/0:29,0:29:75.19:0,75,806	0/0:34,0:34:93.21:0,93,987	0/0:34,0:34:93.23:0,93,999	0/0:27,0:27:75.19:0,75,806	1/1:4,24:28:42.95:881,43,0	0/0:30,0:30:81.20:0,81,870	1/1:0,5:5:15.05:197,15,0
chr10	78635519	.	CGTGT	C	2317.61	PASS	AB=0.807;AC=21;AF=0.404;AN=52;BaseQRankSum=-2.060;DP=454;FS=4.427;HRun=0;HaplotypeScore=105.7473;InbreedingCoeff=0.6791;MQ=62.22;MQ0=12;MQRankSum=4.146;QD=10.44;ReadPosRankSum=0.534;VQSLOD=2.8734;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:7,0:7:12.92:179,13,0	0/0:18,0:13:5.95:0,6,82	0/0:18,0:10:10.59:0,11,172	1/1:24,0:24:24.03:319,24,0	0/0:17,0:16:6.02:0,6,100	0/0:13,0:12:12.04:0,12,187	1/1:16,0:14:5.99:63,6,0	0/0:19,0:19:31.55:0,32,566	1/1:12,11:23:9.49:318,9,0	0/1:10,6:16:0.33:0,0,1	0/0:15,0:13:6.01:0,6,62	0/0:5,0:5:12.04:0,12,199	0/0:18,0:18:33.09:0,33,567	1/1:22,0:21:14.99:258,15,0	1/1:15,0:15:20.78:272,21,0	0/0:26,0:25:54.17:0,54,864	0/0:15,0:15:26.41:0,26,400	0/1:19,0:17:10.04:244,0,10	0/1:14,11:25:32.33:32,0,33	1/1:17,0:17:9.02:110,9,0	0/0:12,0:11:0:0,0,0	0/0:11,0:11:9.01:0,9,122	./.	1/1:23,0:23:20.34:423,20,0	0/0:14,0:14:17.65:0,18,272	1/1:15,0:15:22.87:284,23,0	0/0:7,0:7:14.92:0,15,200
chr10	78635582	.	AAGAG	A	619.68	PASS	AB=0.955;AC=12;AF=0.231;AN=52;BaseQRankSum=-0.761;DP=416;FS=1.891;HRun=0;HaplotypeScore=91.9190;InbreedingCoeff=0.0494;MQ=34.71;MQ0=30;MQRankSum=-2.808;QD=4.39;ReadPosRankSum=-0.560;VQSLOD=1.7971;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:1.72:0,2,7	0/0:3,0:3:3.90:0,4,45	0/0:56,0:2:0.47:0,0,1	0/0:75,0:3:2.95:0,3,19	0/0:11,0:11:0.81:0,1,2	0/0:6,0:6:3.44:0,3,21	0/0:5,0:5:2.92:0,3,17	0/1:12,15:26:16.66:432,0,17	0/0:16,0:16:35.87:0,36,505	0/1:12,0:12:58.65:59,0,111	0/1:12,0:11:0.01:0,0,0	0/0:7,0:6:2.82:0,3,18	0/0:4,0:4:0.47:0,0,1	0/0:20,0:20:43.91:0,44,673	0/1:18,0:16:7.78:8,0,32	0/0:13,0:13:11.90:0,12,97	1/1:15,0:15:1.74:36,2,0	0/0:16,0:15:20.75:0,21,203	0/1:15,0:14:24.14:147,0,24	0/1:14,0:13:30.41:30,0,31	0/0:15,0:15:3.46:0,3,25	0/1:4,0:4:0:0,0,0	./.	./.	1/1:10,0:10:3.09:8,3,0	0/0:10,0:10:20.25:0,20,304	0/1:14,0:14:17.62:18,0,31	0/0:5,0:4:6.47:0,6,56
chr10	78635597	.	AGATG	A	1324.12	PASS	AB=1.000;AC=34;AF=0.680;AN=50;BaseQRankSum=4.079;DP=433;FS=5.352;HRun=0;HaplotypeScore=89.6588;InbreedingCoeff=0.1602;MQ=41.35;MQ0=30;MQRankSum=-3.328;QD=5.49;ReadPosRankSum=-0.176;VQSLOD=1.6643;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:2.55:29,3,0	1/1:3,0:3:4.22:25,4,0	0/0:58,0:3:0.47:0,0,1	0/0:78,0:4:7.53:0,8,79	1/1:14,0:13:8.65:131,9,0	1/1:6,0:6:5.88:37,6,0	1/1:9,0:9:2.34:38,2,0	0/0:19,0:18:6:0,6,75	0/0:19,0:19:44.72:0,45,867	1/1:15,0:15:22.90:263,23,0	1/1:11,0:10:2.98:46,3,0	1/1:6,0:6:8.50:50,8,0	./.	0/1:19,0:19:7.90:8,0,650	0/1:23,0:22:8.65:62,0,9	0/1:17,0:17:29.93:106,0,30	1/1:9,0:9:3.37:10,3,0	1/1:10,0:9:4.66:45,5,0	0/1:18,0:17:99:280,0,107	0/0:10,0:9:8.24:0,8,49	1/1:7,11:18:3.48:44,3,0	1/1:5,0:5:0.47:1,0,0	./.	./.	1/1:12,0:12:3.87:25,4,0	0/1:17,0:17:83.57:84,0,515	1/1:15,0:15:17.88:166,18,0	0/1:8,0:7:22.22:22,0,158
chr10	78635598	.	GAT	G	532.09	PASS	AB=1.000;AC=30;AF=0.600;AN=50;BaseQRankSum=4.983;DP=434;FS=1.389;HRun=0;HaplotypeScore=84.6663;InbreedingCoeff=0.1924;MQ=41.87;MQ0=30;MQRankSum=-4.399;QD=2.40;ReadPosRankSum=-2.277;VQSLOD=1.6573;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:4.88:12,5,0	1/1:3,0:3:2.51:21,3,0	0/0:58,0:3:0.47:0,0,1	0/0:78,0:4:5.16:0,5,39	1/1:14,0:13:8.52:64,9,0	1/1:5,0:5:5.95:53,6,0	1/1:8,0:8:5.53:28,6,0	0/0:20,0:19:30.26:0,30,212	0/0:18,1:19:8.31:0,8,516	1/1:15,0:15:10.75:129,11,0	1/1:10,0:9:2.54:21,3,0	1/1:5,0:5:5.63:25,6,0	./.	0/0:19,0:19:32.43:0,32,570	0/1:22,0:22:13.65:17,0,14	0/1:17,0:17:48.60:52,0,49	0/1:9,0:9:4.40:12,0,4	0/0:10,0:9:7.14:0,7,124	0/1:19,0:18:93.41:93,0,137	0/1:12,0:11:18.95:19,0,28	1/1:19,0:18:2.94:21,3,0	0/1:5,0:5:0:1,0,0	./.	./.	1/1:13,0:13:2.02:6,2,0	0/1:18,0:18:33.57:34,0,387	1/1:14,0:14:13.77:73,14,0	0/1:8,0:7:1.57:2,0,96
chr10	78635599	.	ATG	A	1619.96	PASS	AB=0.774;AC=34;AF=0.680;AN=50;BaseQRankSum=3.356;DP=418;FS=5.281;HRun=0;HaplotypeScore=75.2940;InbreedingCoeff=-0.0702;MQ=41.88;MQ0=30;MQRankSum=-4.491;QD=6.25;ReadPosRankSum=-1.033;VQSLOD=2.2646;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,3:6:2.07:31,2,0	1/1:0,2:2:2.53:28,3,0	0/0:58,0:3:0.47:0,0,1	0/0:78,0:4:7.65:0,8,79	1/1:8,5:12:8.65:132,9,0	1/1:2,2:4:5.99:57,6,0	1/1:2,6:8:5.88:52,6,0	0/1:19,1:19:62.93:63,0,64	0/0:16,0:16:38.20:0,38,681	1/1:10,5:15:29.02:368,29,0	1/1:7,2:8:2.63:46,3,0	1/1:0,4:4:6.48:61,6,0	./.	0/1:17,1:18:5.76:6,0,475	0/1:6,15:21:15.09:52,0,15	0/1:1,16:17:29.28:126,0,29	1/1:6,3:9:3.36:10,3,0	0/1:10,0:9:35.35:35,0,44	0/1:9,10:18:99:283,0,107	0/1:7,4:10:34.79:69,0,35	1/1:17,0:16:3.48:44,3,0	0/1:3,1:4:0.01:0,0,0	./.	./.	1/1:3,9:12:3.46:25,3,0	0/1:12,6:18:85.92:86,0,459	1/1:3,11:14:17.24:167,17,0	0/1:6,1:7:22.27:22,0,143
chr10	78635627	.	A	ATG	60.96	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=2.398;DP=433;FS=2.060;HRun=0;HaplotypeScore=91.1514;InbreedingCoeff=0.7178;MQ=49.41;MQ0=10;MQRankSum=-3.526;QD=3.59;ReadPosRankSum=0.377;VQSLOD=2.4299;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:13.44:0,13,176	0/0:4,0:4:8.98:0,9,108	0/0:14,0:7:12.04:0,12,190	0/0:20,0:5:15:0,15,187	0/0:19,0:18:33.11:0,33,485	0/0:16,0:16:29.22:0,29,311	0/0:13,0:13:15.05:0,15,178	0/0:34,0:32:82.87:0,83,1109	0/0:23,0:23:63.17:0,63,1001	0/0:19,0:19:51.11:0,51,696	0/0:12,0:11:18.06:0,18,277	0/0:9,0:9:20.91:0,21,231	0/0:3,0:3:9.02:0,9,97	0/0:25,0:25:63.18:0,63,951	0/0:19,0:19:17.79:0,18,232	0/0:25,0:25:42.01:0,42,583	1/1:4,13:16:11.74:146,12,0	0/0:9,0:9:23.89:0,24,225	0/0:19,0:18:54.13:0,54,725	0/0:10,0:10:14.99:0,15,198	0/0:23,0:21:27.09:0,27,383	0/0:14,0:13:21.06:0,21,248	0/0:5,0:5:0.47:0,0,1	./.	0/0:14,0:14:17.85:0,18,244	0/0:23,0:22:60.66:0,61,936	0/0:16,0:16:25.14:0,25,263	0/0:12,0:12:30.01:0,30,359
chr10	78635634	.	GTATGTGTT	G	2033.48	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=6.501;DP=418;FS=0.000;HRun=0;HaplotypeScore=114.4162;InbreedingCoeff=0.9065;MQ=52.83;MQ0=8;MQRankSum=-8.413;QD=29.90;ReadPosRankSum=0.129;VQSLOD=2.8841;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,6:10:12.51:324,13,0	0/0:5,0:5:9.03:0,9,387	0/0:12,0:6:15.48:0,15,473	0/0:16,0:8:21.07:0,21,673	0/0:21,0:21:45.15:0,45,1816	1/1:3,13:16:15.05:403,15,0	1/1:1,15:16:8.69:241,9,0	0/0:33,0:31:88.54:0,89,3466	0/0:25,0:25:66.23:0,66,2731	0/0:15,0:15:42.14:0,42,1661	0/0:10,0:10:24.08:0,24,985	1/1:2,6:9:20.96:520,21,0	1/1:0,3:3:9.03:238,9,0	0/0:26,0:26:72.68:0,73,2836	0/0:15,0:15:24.08:0,24,831	0/0:25,0:25:42.14:0,42,1562	0/0:20,0:19:20.04:0,20,969	0/0:8,0:8:21.07:0,21,739	0/0:20,0:19:54.18:0,54,2027	0/0:8,0:8:18.06:0,18,735	0/0:22,0:20:33.11:0,33,1267	1/1:1,12:13:15.89:481,16,0	0/0:1,3:4:0.42:0,0,1	./.	0/0:14,0:14:18.06:0,18,774	0/0:21,0:20:60.20:0,60,2430	0/0:12,0:12:15.27:0,15,865	0/0:13,0:13:36.07:0,36,1225
chr10	78635973	.	G	GA	2894.65	PASS	AB=0.591;AC=15;AF=0.268;AN=56;BaseQRankSum=-8.463;DP=495;FS=19.745;HRun=9;HaplotypeScore=50.8580;InbreedingCoeff=0.8776;MQ=67.16;MQ0=5;MQRankSum=0.632;QD=17.33;ReadPosRankSum=3.413;VQSLOD=2.3307;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:35:22.79:672,23,0	0/0:4,0:4:12:0,12,104	0/0:8,0:8:22.88:0,23,151	0/0:10,0:8:20.02:0,20,143	0/0:17,0:18:37.98:0,38,309	1/1:6,14:19:16.07:404,16,0	0/1:8,18:25:9.70:355,0,10	0/0:28,0:28:80.95:0,81,696	0/0:12,0:12:32.92:0,33,275	0/0:30,0:31:79.99:0,80,676	0/0:18,0:17:41.92:0,42,355	1/1:4,17:20:42.11:463,42,0	1/1:2,13:15:30.08:331,30,0	0/0:11,0:11:29.99:0,30,260	0/0:18,0:18:44.97:0,45,388	0/0:11,0:11:32.96:0,33,277	0/0:35,0:35:92.88:0,93,788	0/0:30,0:30:79.93:0,80,664	0/0:14,0:13:32.96:0,33,277	0/0:16,0:15:44.47:0,44,369	0/0:21,0:21:47.96:0,48,409	1/1:5,8:12:12.03:132,12,0	1/1:2,14:16:5.01:274,5,0	1/1:2,18:20:25.53:455,26,0	0/0:12,0:11:29.87:0,30,248	0/0:15,0:15:38.84:0,39,314	0/0:8,0:8:17.99:0,18,156	0/0:7,0:7:20.98:0,21,179
chr10	78636180	.	G	GGCCACATGCCACAT	5586.61	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=2.224;DP=690;FS=0.000;HRun=0;HaplotypeScore=260.4099;InbreedingCoeff=0.9127;MQ=79.25;MQ0=0;MQRankSum=-8.342;QD=34.70;ReadPosRankSum=-1.117;VQSLOD=3.8001;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:76.02:0,76,2452	0/0:11,0:11:18.03:0,18,608	0/0:37,0:35:10.13:0,10,166	0/0:32,0:31:25.43:0,25,322	0/0:22,0:22:39.10:0,39,985	0/0:18,0:18:21.07:0,21,790	0/0:29,0:29:54.18:0,54,1359	0/0:29,0:29:32.60:0,33,501	0/0:30,0:30:66.21:0,66,2222	0/0:31,0:31:54.19:0,54,1665	0/0:12,0:12:15.05:0,15,587	1/1:12,6:20:12.04:766,12,0	1/1:12,5:26:11.77:764,12,0	0/0:24,0:24:39.13:0,39,1333	0/0:26,0:26:42.13:0,42,1286	0/0:27,0:27:63.17:0,63,1824	0/0:25,0:25:57.18:0,57,1602	0/0:33,0:33:63.22:0,63,2193	0/0:16,0:16:15.05:0,15,573	0/0:17,0:17:36.10:0,36,1152	0/0:34,0:34:66.20:0,66,2085	1/1:9,2:20:3.01:201,3,0	1/1:14,5:24:12.04:622,12,0	1/1:12,4:23:6.02:321,6,0	0/0:17,0:17:30.10:0,30,1164	1/1:29,0:29:48.15:1724,48,0	0/0:22,0:22:30.10:0,30,945	1/1:19,0:19:30.10:1190,30,0
chr10	78640670	.	CTGTG	C	3487.85	PASS	AB=0.674;AC=15;AF=0.268;AN=56;BaseQRankSum=-1.879;DP=733;FS=0.961;HRun=0;HaplotypeScore=153.2642;InbreedingCoeff=0.7010;MQ=66.17;MQ0=9;MQRankSum=-1.062;QD=13.79;ReadPosRankSum=2.073;VQSLOD=3.2321;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:46:2.96:3,0,310	0/0:3,0:8:14.08:0,14,235	0/0:28,0:19:3.01:0,3,65	0/0:34,0:20:15.05:0,15,213	0/0:10,0:26:41.14:0,41,634	1/1:13,16:31:20.21:475,20,0	1/1:12,16:29:24.39:334,24,0	0/0:38,0:38:49.02:0,49,743	0/0:18,0:19:41.88:0,42,860	0/0:21,0:23:33.09:0,33,494	0/0:5,0:22:48.96:0,49,753	1/1:8,11:21:24.07:366,24,0	0/1:8,18:28:21.26:681,0,21	0/0:25,0:29:65.75:0,66,1349	0/0:7,0:29:39.13:0,39,683	0/0:7,0:21:21.07:0,21,382	0/0:38,0:42:79.64:0,80,1731	0/1:15,1:19:8.79:9,0,546	0/0:19,0:18:21.07:0,21,442	0/0:5,0:20:29.19:0,29,345	0/0:16,0:42:26.98:0,27,437	1/1:11,13:26:33.10:489,33,0	1/1:6,11:18:21.06:318,21,0	1/1:12,20:34:53.96:814,54,0	0/0:9,0:27:40.42:0,40,660	0/0:15,0:26:48.57:0,49,834	0/0:9,0:19:24.08:0,24,417	0/0:4,0:3:3.01:0,3,39
chr10	78640702	.	GCA	G	125.89	PASS	AB=0.915;AC=5;AF=0.089;AN=56;BaseQRankSum=0.987;DP=706;FS=27.253;HRun=0;HaplotypeScore=138.5322;InbreedingCoeff=0.1264;MQ=67.17;MQ0=6;MQRankSum=-2.604;QD=1.70;ReadPosRankSum=-3.339;VQSLOD=0.0823;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:55:99:0,117,1276	0/0:6,0:6:17.06:0,17,203	0/0:34,0:27:81.23:0,81,1382	0/1:24,1:14:18.81:19,0,580	0/0:22,0:22:52.82:0,53,708	0/0:26,0:26:57.44:0,57,678	0/0:33,0:33:62.87:0,63,890	0/1:25,6:31:99:125,0,1022	0/0:27,0:27:81.11:0,81,1375	0/1:16,1:17:80.55:81,0,468	0/0:26,0:26:48.71:0,49,687	0/0:20,0:20:45.06:0,45,576	0/0:29,0:29:74.96:0,75,899	0/0:34,0:34:47.94:0,48,1544	0/0:27,0:27:51.13:0,51,612	0/0:22,0:22:46.53:0,47,723	0/0:41,0:40:97.60:0,98,1742	0/0:18,0:18:21.41:0,21,701	0/0:13,0:13:39.13:0,39,733	0/0:25,0:25:55.80:0,56,679	0/0:36,0:35:57.17:0,57,785	0/0:20,0:20:34.83:0,35,496	0/0:18,0:18:36.06:0,36,447	0/0:34,0:34:80.95:0,81,1002	0/0:21,0:21:14.90:0,15,445	0/0:23,0:23:55.54:0,56,965	0/0:21,0:21:54.16:0,54,727	1/1:1,0:1:0.89:2,1,0
chr10	78643804	.	A	AT	4029.47	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-12.193;DP=497;FS=2.963;HRun=8;HaplotypeScore=48.7143;InbreedingCoeff=0.9189;MQ=73.92;MQ0=0;MQRankSum=-0.263;QD=26.00;ReadPosRankSum=2.183;VQSLOD=4.4289;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:27:69.21:796,69,0	0/0:10,0:10:30.02:0,30,274	0/0:16,0:16:0.84:0,1,165	0/0:6,0:6:2.99:0,3,27	0/0:29,0:29:78.02:0,78,710	1/1:2,18:20:45.13:518,45,0	1/1:3,17:20:45.13:519,45,0	0/0:23,0:23:51.01:0,51,463	0/0:13,0:13:36.02:0,36,329	0/0:30,0:30:72.03:0,72,659	0/0:20,0:20:53.99:0,54,487	1/1:0,13:13:30.09:346,30,0	1/1:4,14:18:8.68:354,9,0	0/0:10,0:10:27.01:0,27,247	0/0:17,0:17:42.01:0,42,380	0/0:11,0:11:26.99:0,27,242	0/0:24,0:24:69.03:0,69,632	0/0:17,0:17:36:0,36,330	0/0:15,0:15:39.01:0,39,353	0/0:12,0:12:30:0,30,271	0/0:12,0:12:30.01:0,30,275	1/1:3,11:14:30.09:346,30,0	1/1:4,15:19:14.66:423,15,0	1/1:2,22:24:63.19:727,63,0	0/0:21,0:21:54.02:0,54,494	0/0:17,0:17:51.03:0,51,467	0/0:25,0:24:72.01:0,72,650	0/0:14,0:14:30.01:0,30,275
chr10	78644008	.	TAC	T	1685.75	PASS	AB=0.859;AC=17;AF=0.304;AN=56;BaseQRankSum=2.935;DP=601;FS=16.043;HRun=0;HaplotypeScore=103.1888;InbreedingCoeff=0.7368;MQ=64.73;MQ0=4;MQRankSum=5.612;QD=8.07;ReadPosRankSum=3.830;VQSLOD=2.3582;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,13:38:29.75:301,30,0	0/0:1,0:3:3:0,3,26	0/0:36,0:25:9.03:0,9,136	0/0:35,0:26:21.01:0,21,265	0/0:15,0:23:10.29:0,10,51	1/1:12,8:22:26.74:266,27,0	1/1:10,12:22:12.49:300,12,0	0/0:31,0:31:37.73:0,38,422	0/1:18,2:20:0.97:1,0,405	0/0:29,0:29:65.81:0,66,661	0/0:16,0:16:12.01:0,12,123	1/1:10,10:20:21.06:239,21,0	0/1:10,10:20:21.99:214,0,22	0/0:11,0:11:27.05:0,27,379	0/0:14,0:22:14.91:0,15,129	0/0:19,0:25:9.15:0,9,64	0/0:25,3:28:23.13:0,23,787	0/0:25,0:24:54.17:0,54,802	0/0:14,0:14:9.47:0,9,103	0/0:9,0:17:16.93:0,17,123	0/1:21,0:20:0:0,0,0	1/1:9,4:14:11.87:116,12,0	1/1:4,8:12:15.03:170,15,0	1/1:6,11:19:26.74:267,27,0	0/0:17,0:25:5.74:0,6,38	0/0:11,0:23:42:0,42,405	0/0:18,0:23:13.93:0,14,177	0/0:2,0:6:18:0,18,166
chr10	78645054	.	C	CATT	563.74	PASS	AB=0.914;AC=11;AF=0.220;AN=50;BaseQRankSum=4.543;DP=235;FS=42.158;HRun=0;HaplotypeScore=68.0530;InbreedingCoeff=-0.0359;MQ=28.86;MQ0=62;MQRankSum=-2.355;QD=5.58;ReadPosRankSum=4.991;VQSLOD=-0.1471;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,3:14:55.75:211,0,56	0/0:2,0:2:5.93:0,6,72	./.	./.	0/0:9,0:7:10.34:0,10,130	0/1:14,1:7:24.87:61,0,25	0/1:15,0:11:13.39:13,0,124	0/1:19,0:8:14.43:14,0,102	0/0:7,0:6:5.10:0,5,22	0/0:9,0:6:18.03:0,18,221	0/0:5,0:5:6.74:0,7,60	1/1:4,0:1:3.01:52,3,0	1/1:6,0:1:3.01:33,3,0	0/1:5,0:4:18.95:19,0,109	0/0:8,0:8:11.33:0,11,128	0/0:8,0:6:14.98:0,15,199	0/0:9,0:8:3.01:0,3,41	0/1:5,1:3:17.92:97,0,18	0/0:10,0:5:15.02:0,15,232	0/0:4,0:4:2.74:0,3,12	0/0:17,0:16:2.33:0,2,65	0/0:13,0:8:5.92:0,6,37	./.	0/1:7,4:11:11.25:197,0,11	0/0:7,0:7:12.93:0,13,199	0/0:6,0:5:14.97:0,15,223	0/0:3,0:2:6.02:0,6,78	0/0:10,0:7:16.07:0,16,186
chr10	78646754	.	G	GAAA	6613.54	PASS	AB=0.647;AC=23;AF=0.411;AN=56;BaseQRankSum=-5.893;DP=633;FS=3.422;HRun=11;HaplotypeScore=115.6101;InbreedingCoeff=0.8794;MQ=54.25;MQ0=20;MQRankSum=-3.848;QD=23.54;ReadPosRankSum=-4.932;VQSLOD=2.6528;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:32:31.97:0,32,359	1/1:1,7:10:14.95:282,15,0	0/0:14,0:7:14.61:0,15,113	0/0:7,0:2:2.97:0,3,34	1/1:12,16:30:31.61:668,32,0	0/0:3,0:16:37.52:0,38,221	0/0:9,0:15:20.46:0,20,136	1/1:11,10:26:50.75:774,51,0	0/0:26,0:26:44.83:0,45,496	1/1:18,13:33:43.34:673,43,0	1/1:6,13:18:27.50:589,27,0	0/0:4,0:22:46.97:0,47,283	0/0:5,0:16:20.54:0,21,125	0/0:25,0:25:53.69:0,54,597	1/1:9,9:17:15.01:243,15,0	1/1:6,10:18:28.34:493,28,0	0/0:23,0:25:51.52:0,52,670	0/0:27,0:28:8.81:0,9,524	0/1:10,9:21:53.99:561,0,54	1/1:12,16:27:36.52:552,37,0	1/1:8,7:14:18:250,18,0	0/0:5,0:21:38.02:0,38,226	0/0:7,0:28:49.52:0,50,291	0/0:4,0:25:58.80:0,59,356	1/1:9,16:27:12.24:828,12,0	0/0:25,0:26:47.79:0,48,535	1/1:9,16:27:39.48:701,39,0	0/0:16,0:16:42.01:0,42,464
chr10	78647347	.	T	TC	8736.94	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-5.313;DP=666;FS=0.000;HRun=8;HaplotypeScore=129.0355;InbreedingCoeff=0.9603;MQ=81.12;MQ0=0;MQRankSum=-2.595;QD=24.61;ReadPosRankSum=-0.437;VQSLOD=3.1624;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:48.48:0,48,441	1/1:2,17:19:23.68:526,24,0	0/0:14,0:14:4.60:0,5,192	0/0:21,0:21:12:0,12,263	1/1:1,26:27:60.18:692,60,0	0/0:23,0:23:54.02:0,54,494	0/0:28,0:28:68.98:0,69,619	1/1:4,16:20:48.12:540,48,0	0/0:27,0:27:72.03:0,72,659	1/1:2,28:30:75.22:866,75,0	1/1:4,16:20:15.66:392,16,0	0/0:28,0:28:63:0,63,571	0/0:20,0:20:57.02:0,57,522	0/0:20,0:20:51:0,51,462	1/1:4,28:32:78.23:900,78,0	1/1:3,36:39:99:1212,105,0	0/0:16,0:16:48:0,48,433	0/0:19,0:19:48.02:0,48,439	1/1:9,12:21:36.11:414,36,0	1/1:6,22:28:60.18:692,60,0	1/1:8,34:42:78.23:900,78,0	0/0:21,1:22:31.41:0,31,537	0/0:22,0:22:57.02:0,57,521	0/0:23,0:23:57.03:0,57,522	1/1:2,16:18:45.13:520,45,0	1/1:7,4:21:30.28:203,30,0	1/1:7,25:30:72.21:830,72,0	1/1:4,1:6:5.85:49,6,0
chr10	78648555	.	TA	T	8791.38	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=5.625;DP=550;FS=0.423;HRun=10;HaplotypeScore=71.9565;InbreedingCoeff=0.9865;MQ=70.56;MQ0=3;MQRankSum=-0.603;QD=21.24;ReadPosRankSum=2.330;VQSLOD=5.7772;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:71.98:625,72,0	1/1:1,5:6:11.99:104,12,0	0/0:30,0:25:24.18:0,24,359	0/0:21,0:14:13.98:0,14,126	1/1:2,19:21:53.97:468,54,0	1/1:2,19:21:30.19:465,30,0	1/1:2,17:21:49.06:403,49,0	1/1:7,14:21:44.94:385,45,0	0/0:24,0:24:63.17:0,63,697	1/1:0,13:13:38.99:339,39,0	1/1:1,23:24:59.98:521,60,0	1/1:0,13:13:38.99:339,39,0	1/1:1,11:12:29.99:260,30,0	0/0:7,0:7:18.05:0,18,199	1/1:2,21:24:53.02:449,53,0	1/1:0,9:9:26.99:234,27,0	0/0:33,0:33:67.45:0,67,951	0/0:20,0:20:51.14:0,51,561	1/1:3,16:19:50.98:439,51,0	1/1:4,19:23:56.97:494,57,0	1/1:1,12:13:35.96:307,36,0	1/1:4,10:14:26.99:234,27,0	1/1:4,9:14:26.02:215,26,0	1/1:6,22:28:57.49:606,57,0	1/1:1,18:20:47.02:397,47,0	1/1:5,27:32:77.95:674,78,0	1/1:3,23:26:65.98:573,66,0	1/1:1,10:11:29.99:260,30,0
chr10	78649362	.	A	AT	823.74	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.642;DP=676;FS=7.828;HRun=9;HaplotypeScore=68.5482;InbreedingCoeff=0.9568;MQ=75.83;MQ0=0;MQRankSum=-1.038;QD=27.46;ReadPosRankSum=-1.530;VQSLOD=3.1255;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:53.69:0,54,683	0/0:10,0:10:26.98:0,27,234	0/0:11,0:12:9.50:0,9,83	0/0:18,1:22:14.98:0,15,228	0/0:26,0:26:62.98:0,63,547	0/0:28,0:28:77.94:0,78,670	0/0:24,0:24:59.98:0,60,521	0/0:30,0:30:71.96:0,72,619	0/0:23,0:23:59.97:0,60,521	0/0:24,0:24:62.98:0,63,547	0/0:25,0:25:68.98:0,69,599	0/0:23,0:23:53.97:0,54,469	0/0:34,0:35:95:0,95,813	0/0:17,0:18:47.01:0,47,392	0/0:27,0:27:71.95:0,72,621	0/0:25,0:25:62.95:0,63,543	0/0:18,0:18:44.97:0,45,391	0/0:21,0:21:50.97:0,51,443	0/0:28,0:29:74:0,74,631	0/0:28,0:28:80.98:0,81,703	0/0:18,1:19:17.81:0,18,383	0/0:30,0:30:79.99:0,80,679	0/0:25,0:25:68.97:0,69,599	0/0:14,0:14:41.98:0,42,360	0/0:31,0:31:74.97:0,75,651	1/1:0,22:23:69.02:744,69,0	0/0:46,1:47:92.75:0,93,1030	1/1:1,6:7:18.05:199,18,0
chr10	78650134	.	T	TG	7342.37	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=17.851;DP=569;FS=20.280;HRun=0;HaplotypeScore=146.3275;InbreedingCoeff=0.9748;MQ=61.94;MQ0=9;MQRankSum=-15.938;QD=25.41;ReadPosRankSum=1.278;VQSLOD=3.5115;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.22:0,66,923	1/1:1,4:4:6.02:72,6,0	0/0:12,0:10:20.53:0,21,195	0/0:9,0:7:17.26:0,17,197	1/1:2,17:20:24.04:259,24,0	0/0:27,0:27:81.27:0,81,1133	0/0:11,0:11:30.10:0,30,420	1/1:0,25:41:87.23:1081,87,0	0/0:18,0:18:54.18:0,54,754	1/1:1,31:31:93.27:1184,93,0	1/1:1,15:16:25.89:287,26,0	0/0:22,0:22:66.21:0,66,905	0/0:25,0:25:75.25:0,75,1046	0/0:22,0:22:63.21:0,63,881	1/1:2,23:25:57.16:665,57,0	1/1:1,24:25:12.20:587,12,0	0/0:18,0:18:54.18:0,54,755	0/0:17,0:17:51.17:0,51,713	1/1:2,12:21:48.12:574,48,0	1/1:1,32:30:75.23:900,75,0	1/1:1,9:10:14.74:166,15,0	0/0:11,0:11:33.07:0,33,439	0/0:23,0:23:69.19:0,69,942	0/0:8,0:8:24.08:0,24,335	1/1:0,20:18:36.11:431,36,0	0/0:28,1:29:46.75:0,47,1095	1/1:0,35:33:93.28:1136,93,0	0/0:6,0:6:18.06:0,18,252
chr10	78650136	.	A	ATG	7547.96	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=17.696;DP=571;FS=25.415;HRun=0;HaplotypeScore=156.4627;InbreedingCoeff=0.9665;MQ=62.31;MQ0=9;MQRankSum=-16.651;QD=26.30;ReadPosRankSum=1.111;VQSLOD=3.4486;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.20:0,69,1010	1/1:3,2:4:6.02:85,6,0	0/0:10,0:9:17.05:0,17,177	0/0:9,0:7:16.39:0,16,189	1/1:11,9:18:18.06:250,18,0	0/0:27,0:27:81.27:0,81,1235	0/0:11,0:11:33.08:0,33,463	1/1:33,8:41:83.98:733,84,0	0/0:17,0:17:48.11:0,48,668	1/1:18,20:35:99:1275,100,0	1/1:5,9:14:27.07:360,27,0	0/0:20,0:20:57.12:0,57,804	0/0:24,0:24:72.24:0,72,1099	0/0:22,0:22:60.20:0,60,916	1/1:7,17:24:53.97:749,54,0	1/1:11,15:26:8.16:660,8,0	0/0:19,0:19:54.18:0,54,826	0/0:19,0:19:51.08:0,51,706	1/1:12,8:19:41.16:466,41,0	1/1:8,25:30:75.25:1070,75,0	1/1:6,5:11:11.97:166,12,0	0/0:12,0:12:30.07:0,30,410	0/0:23,0:23:66.21:0,66,987	0/0:8,0:8:24.08:0,24,367	1/1:8,13:19:39.11:535,39,0	0/0:30,0:30:78.52:0,79,1146	1/1:9,25:31:92.26:1198,92,0	0/0:10,0:10:30.04:0,30,372
chr10	78650141	.	TAC	T	3120.78	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=18.828;DP=578;FS=39.678;HRun=0;HaplotypeScore=170.8197;InbreedingCoeff=0.9563;MQ=62.81;MQ0=5;MQRankSum=-14.358;QD=10.95;ReadPosRankSum=-0.682;VQSLOD=1.6073;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.18:0,75,1271	1/1:5,1:6:11.08:68,11,0	0/0:9,0:8:6.20:0,6,166	0/0:10,0:8:5.79:0,6,179	1/1:15,3:17:14.08:46,14,0	0/0:30,0:30:90.21:0,90,1514	0/0:15,0:15:42.07:0,42,643	1/1:31,9:40:99:836,109,0	0/0:17,0:17:48.11:0,48,823	1/1:32,6:35:90.97:560,91,0	1/1:14,1:15:23.33:94,23,0	0/0:18,0:18:54.15:0,54,975	0/0:26,0:26:78.22:0,78,1401	0/0:23,0:23:66.18:0,66,1167	1/1:22,4:26:52.09:258,52,0	1/1:22,5:27:33.53:267,34,0	0/0:20,0:20:60.17:0,60,1089	0/0:20,0:20:57.07:0,57,924	1/1:18,2:19:52.88:369,53,0	1/1:28,2:30:63.88:238,64,0	1/1:8,3:11:10.84:59,11,0	0/0:9,0:9:27.02:0,27,384	0/0:25,0:25:72.20:0,72,1266	0/0:8,0:8:24.08:0,24,462	1/1:16,4:19:36.51:161,37,0	0/0:26,1:27:44.47:0,44,1262	1/1:30,4:31:81.79:391,82,0	0/0:11,0:11:33.09:0,33,558
chr10	78650425	.	CTTTT	C	4498.87	PASS	AB=0.810;AC=16;AF=0.286;AN=56;BaseQRankSum=5.476;DP=559;FS=3.076;HRun=14;HaplotypeScore=112.6724;InbreedingCoeff=0.8279;MQ=62.29;MQ0=6;MQRankSum=-0.056;QD=22.61;ReadPosRankSum=8.715;VQSLOD=3.2397;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:7,31:38:63.04:891,63,0	0/0:1,0:3:9.03:0,9,176	0/1:11,0:8:4.36:4,0,29	0/0:8,0:7:12.04:0,12,189	0/0:14,0:25:52.58:0,53,921	1/1:2,21:23:54.12:764,54,0	1/1:8,19:25:45.01:637,45,0	0/0:13,0:19:46.02:0,46,857	0/0:12,0:13:36.11:0,36,739	0/0:15,0:24:54.18:0,54,1035	0/0:7,0:13:30.10:0,30,627	0/1:7,10:18:15.48:451,0,15	1/1:3,12:15:33.06:467,33,0	0/0:16,0:16:39.13:0,39,796	0/0:15,0:24:45.15:0,45,924	0/0:13,0:25:42.14:0,42,832	0/0:21,0:26:66.19:0,66,1324	0/0:22,0:23:63.22:0,63,1435	0/0:21,0:30:66.22:0,66,1301	0/0:13,0:20:48.15:0,48,961	0/0:5,0:9:17.99:0,18,291	1/1:4,16:21:29.82:405,30,0	1/1:3,14:20:37.11:475,37,0	1/1:13,12:26:29.92:406,30,0	0/0:11,0:12:12.04:0,12,232	0/0:16,0:25:65.33:0,65,1171	0/0:19,0:21:45.15:0,45,889	0/0:4,0:12:18.02:0,18,279
chr10	78651603	.	TC	T	8913.81	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=12.907;DP=711;FS=12.713;HRun=6;HaplotypeScore=119.0237;InbreedingCoeff=0.9988;MQ=83.90;MQ0=0;MQRankSum=-3.237;QD=27.26;ReadPosRankSum=-1.024;VQSLOD=3.0570;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:99:0,132,1686	1/1:2,13:15:36.09:387,36,0	0/0:31,0:31:70.99:0,71,854	0/0:32,0:31:72.11:0,72,865	1/1:1,22:23:66.17:708,66,0	0/0:26,0:26:72.22:0,72,933	0/0:25,0:25:63.20:0,63,829	1/1:6,30:36:81.20:870,81,0	0/0:24,0:24:69.22:0,69,894	1/1:2,20:22:57.14:611,57,0	1/1:1,18:19:54.14:579,54,0	0/0:30,0:30:87.27:0,87,1130	0/0:27,0:27:78.24:0,78,1009	0/0:24,0:24:72.23:0,72,946	1/1:1,29:30:84.21:903,84,0	1/1:3,26:29:35.71:734,36,0	0/0:37,0:37:99:0,102,1341	0/0:11,0:11:32.90:0,33,407	1/1:7,16:23:48.12:515,48,0	1/1:7,21:28:72.09:757,72,0	1/1:5,25:30:69.17:742,69,0	0/0:25,0:25:72.22:0,72,927	0/0:23,0:23:63.20:0,63,825	0/0:24,0:24:69.22:0,69,908	1/1:4,17:21:57.12:598,57,0	1/1:1,17:18:54.13:574,54,0	1/1:1,26:27:69.17:741,69,0	1/1:0,6:6:18.05:193,18,0
chr10	78651910	.	CT	C	6444.18	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.779;DP=641;FS=0.666;HRun=4;HaplotypeScore=60.3847;InbreedingCoeff=0.9971;MQ=85.81;MQ0=0;MQRankSum=-2.575;QD=32.22;ReadPosRankSum=1.863;VQSLOD=5.4317;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,35:36:99:1188,99,0	0/0:9,0:9:27.09:0,27,377	0/0:22,0:22:60.18:0,60,787	0/0:19,0:19:49.70:0,50,641	0/0:23,0:23:57.18:0,57,781	1/1:3,25:28:69.21:828,69,0	1/1:1,21:22:57.17:684,57,0	0/0:28,0:28:81.25:0,81,1103	0/0:27,0:27:81.26:0,81,1119	0/0:31,0:31:90.30:0,90,1257	0/0:17,0:17:51.16:0,51,699	1/1:0,30:30:84.26:1008,84,0	1/1:1,19:20:54.17:648,54,0	0/0:23,0:23:63.21:0,63,882	0/0:28,0:28:81.27:0,81,1134	0/0:21,0:21:63.19:0,63,850	0/0:23,0:23:69.23:0,69,966	0/0:23,0:23:60.18:0,60,822	0/0:17,0:17:39.12:0,39,529	0/0:26,0:26:78.26:0,78,1087	0/0:19,0:19:57.17:0,57,779	1/1:0,25:25:66.20:792,66,0	1/1:0,26:26:72.22:864,72,0	1/1:1,12:13:36.11:432,36,0	0/0:25,0:25:72.22:0,72,989	0/0:23,0:23:69.23:0,69,960	0/0:31,0:31:93.30:0,93,1285	0/0:6,0:6:15.05:0,15,210
chr10	78652427	.	GTGTTT	G	5100.69	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=0.223;DP=690;FS=16.753;HRun=0;HaplotypeScore=174.7545;InbreedingCoeff=0.9816;MQ=69.94;MQ0=6;MQRankSum=-2.730;QD=22.77;ReadPosRankSum=-1.177;VQSLOD=3.5160;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:53:66.09:0,66,1491	1/1:4,8:12:21.07:385,21,0	0/0:37,0:32:26.66:0,27,742	0/0:46,0:29:25.23:0,25,518	1/1:5,9:14:14.72:106,15,0	0/0:16,0:26:27.09:0,27,723	0/0:34,0:34:69.21:0,69,1559	1/1:11,10:21:30.04:426,30,0	0/0:31,0:31:63.19:0,63,1687	1/1:5,17:22:54.17:948,54,0	1/1:5,8:13:18.06:312,18,0	0/0:29,0:41:75.21:0,75,1826	0/0:9,0:19:33.10:0,33,775	0/0:24,0:24:45.15:0,45,1241	1/1:8,15:23:33.11:605,33,0	1/1:14,12:26:33.11:590,33,0	0/0:33,0:33:63.22:0,63,1732	0/0:9,0:16:23.81:0,24,524	1/1:12,4:15:12.04:220,12,0	1/1:15,7:22:17.91:224,18,0	1/1:12,12:24:24.08:440,24,0	0/0:11,0:20:39.09:0,39,889	0/0:14,0:22:31.29:0,31,640	0/0:13,0:20:10.23:0,10,138	1/1:5,7:12:18.02:295,18,0	0/0:18,0:26:46.22:0,46,1082	1/1:8,11:18:30.10:550,30,0	0/0:17,0:17:33.11:0,33,851
chr10	78652949	.	GCTTT	G	2590.24	PASS	AB=1.000;AC=20;AF=0.385;AN=52;BaseQRankSum=8.081;DP=631;FS=7.594;HRun=0;HaplotypeScore=215.0728;InbreedingCoeff=0.5827;MQ=45.21;MQ0=23;MQRankSum=-5.745;QD=8.72;ReadPosRankSum=4.284;VQSLOD=1.4785;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:29.98:0,30,304	0/0:5,0:5:0.06:0,0,0	./.	./.	1/1:22,0:22:11.16:209,11,0	0/0:31,0:33:50.42:0,50,665	0/0:27,0:26:33.03:0,33,366	0/0:30,0:29:14.70:0,15,90	0/0:28,0:28:45.12:0,45,886	1/1:25,0:25:3.99:190,4,0	1/1:23,0:23:27.16:247,27,0	0/0:26,0:26:41.48:0,41,447	0/0:28,0:28:44.83:0,45,400	0/0:22,0:22:38.91:0,39,802	0/1:34,0:34:34.91:279,0,35	0/1:29,0:29:72.10:351,0,72	0/0:28,0:27:52.04:0,52,1024	1/1:9,13:20:18.07:285,18,0	1/1:23,0:18:11.47:92,11,0	1/1:23,0:23:33.05:323,33,0	0/0:9,0:9:5.92:0,6,39	0/0:17,0:16:35.07:0,35,251	0/0:21,0:21:35.42:0,35,386	0/0:15,0:15:0.47:0,0,1	1/1:18,0:17:26.90:236,27,0	0/1:19,0:19:11.86:182,0,12	0/1:33,0:33:9.11:300,0,9	1/1:26,0:13:9.43:81,9,0
chr10	78652958	.	CTTTCTTT	C	5649.24	PASS	AB=0.753;AC=14;AF=0.250;AN=56;BaseQRankSum=10.874;DP=632;FS=2.602;HRun=0;HaplotypeScore=245.3226;InbreedingCoeff=-0.1672;MQ=43.30;MQ0=24;MQRankSum=-9.570;QD=19.22;ReadPosRankSum=8.707;VQSLOD=3.5775;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:56.87:0,57,1023	0/1:4,2:6:20.93:23,0,21	0/0:9,0:5:12.04:0,12,155	0/0:7,0:3:9.03:0,9,139	0/1:9,14:23:36.82:472,0,37	0/0:34,0:34:69.71:0,70,1982	0/0:26,0:25:66.82:0,67,953	0/0:31,0:31:14.01:0,14,173	0/0:27,0:27:81.26:0,81,2215	0/1:17,8:25:77.14:440,0,77	0/1:14,11:25:23.85:510,0,24	0/0:29,0:29:83.31:0,83,1625	0/0:26,0:26:74.10:0,74,1402	0/0:23,0:23:69.23:0,69,1930	0/1:18,14:32:98.04:757,0,98	0/1:11,17:28:99:841,0,116	0/0:27,0:25:69.24:0,69,2260	0/0:23,0:21:15.93:0,16,448	0/1:24,4:22:99:155,0,210	0/1:11,11:22:23.15:623,0,23	0/1:8,0:8:6.45:6,0,27	0/0:18,0:17:50.86:0,51,891	0/0:22,0:22:65.37:0,65,1277	0/0:14,0:14:31.09:0,31,353	1/1:8,10:17:5.16:520,5,0	0/1:16,5:21:11.58:432,0,12	0/1:18,15:33:32.78:713,0,33	0/1:21,4:12:66.55:156,0,67
chr10	78653020	.	GT	G	4310.95	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-7.614;DP=711;FS=7.007;HRun=9;HaplotypeScore=170.9658;InbreedingCoeff=0.9463;MQ=66.07;MQ0=1;MQRankSum=5.400;QD=23.43;ReadPosRankSum=3.742;VQSLOD=3.3201;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:69.03:631,69,0	0/0:4,0:16:23.39:0,23,139	0/0:30,0:24:29.74:0,30,341	0/0:31,1:25:2.80:0,3,281	0/0:11,0:40:63.44:0,63,341	1/1:7,22:29:59.87:536,60,0	1/1:1,14:15:41.92:373,42,0	0/0:12,0:35:34.74:0,35,207	0/0:16,0:16:45.13:0,45,519	0/0:8,0:33:31.91:0,32,186	0/0:4,0:34:41.93:0,42,219	1/1:1,23:24:69.04:632,69,0	1/1:1,28:29:81.04:741,81,0	0/0:16,0:16:45.13:0,45,516	0/0:10,0:42:40.55:0,41,216	0/0:9,0:32:28.82:0,29,245	0/0:30,0:30:81.16:0,81,902	0/0:20,0:20:48.14:0,48,554	0/0:6,0:18:26.96:0,27,151	0/0:7,0:28:27.39:0,27,125	0/0:3,0:3:5.87:0,6,36	1/1:2,18:20:48.01:439,48,0	1/1:2,24:26:67.99:630,68,0	1/1:3,12:15:36.02:329,36,0	0/0:4,0:26:32.04:0,32,179	0/0:2,0:25:35.22:0,35,162	0/0:8,0:34:32.11:0,32,181	0/0:4,0:13:11.65:0,12,73
chr10	78656056	.	CGTGT	C	1397.67	PASS	AB=0.893;AC=33;AF=0.717;AN=46;BaseQRankSum=6.267;DP=632;FS=23.281;HRun=0;HaplotypeScore=113.4204;InbreedingCoeff=0.3736;MQ=65.29;MQ0=14;MQRankSum=-3.195;QD=3.63;ReadPosRankSum=-0.528;VQSLOD=0.7423;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:28:11.98:104,12,0	1/1:10,3:13:6.02:93,6,0	./.	./.	./.	./.	1/1:13,0:14:3:28,3,0	0/0:22,0:21:4.82:0,5,35	0/0:20,0:20:15.04:0,15,262	1/1:14,2:16:6.02:92,6,0	1/1:14,4:18:9.03:139,9,0	1/1:12,0:18:18.02:167,18,0	1/1:15,0:20:9.07:84,9,0	0/0:25,0:25:30.01:0,30,421	1/1:14,5:19:6.01:74,6,0	1/1:18,5:25:0.05:218,0,0	0/0:20,0:20:24.03:0,24,411	0/0:31,0:31:42.23:0,42,703	1/1:10,3:13:3.01:44,3,0	1/1:18,0:18:3:27,3,0	0/1:29,1:30:28.68:111,0,29	1/1:21,0:25:6.01:56,6,0	1/1:17,0:19:0.47:1,0,0	1/1:22,0:32:6:54,6,0	0/1:16,6:22:26.37:84,0,26	1/1:24,4:27:4.30:90,4,0	0/1:23,2:25:55.10:84,0,55	./.
chr10	78658107	.	CACATACATACAT	C	7133.48	PASS	AB=0.895;AC=23;AF=0.460;AN=50;BaseQRankSum=4.089;DP=607;FS=3.291;HRun=0;HaplotypeScore=248.2663;InbreedingCoeff=0.8488;MQ=54.89;MQ0=2;MQRankSum=-8.176;QD=22.86;ReadPosRankSum=0.913;VQSLOD=4.0032;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:19:18.06:0,18,490	1/1:11,1:13:7.56:132,8,0	./.	./.	1/1:20,19:39:42.14:1279,42,0	0/0:23,0:23:27.09:0,27,1202	0/0:13,0:13:14.17:0,14,587	1/1:42,0:40:3.01:40,3,0	0/1:15,1:17:70.09:70,0,1546	1/1:12,13:25:33.11:925,33,0	1/1:14,11:25:15.05:483,15,0	0/0:30,0:31:39.12:0,39,1371	0/0:14,0:16:24.08:0,24,960	0/0:12,0:13:30.10:0,30,1411	1/1:12,9:21:18.06:606,18,0	1/1:8,8:16:21.07:721,21,0	0/0:21,0:21:41.29:0,41,2073	0/0:17,0:17:26.92:0,27,1077	1/1:9,4:13:11.48:359,11,0	1/1:15,25:40:22.16:1283,22,0	./.	0/0:20,0:27:12.04:0,12,434	0/0:30,0:31:36.12:0,36,1536	0/0:10,0:10:9.03:0,9,233	1/1:12,12:24:18.06:617,18,0	0/0:24,0:24:45.15:0,45,2340	1/1:22,15:37:18.06:618,18,0	0/0:13,0:13:30.09:0,30,1420
chr10	78658240	.	AAATGAAACCAGT	A	10985.19	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.974;DP=640;FS=15.777;HRun=0;HaplotypeScore=226.3293;InbreedingCoeff=0.9970;MQ=77.58;MQ0=0;MQRankSum=-15.022;QD=78.47;ReadPosRankSum=3.797;VQSLOD=3.3758;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:16:27.09:976,27,0	0/0:10,0:10:27.09:0,27,1618	0/0:33,0:33:87.25:0,87,4288	0/0:13,0:13:30.07:0,30,1270	0/0:24,0:24:69.24:0,69,3834	1/1:3,22:25:60.21:2225,60,0	1/1:2,7:9:18.06:670,18,0	0/0:43,0:43:99:0,114,6100	0/0:21,0:21:60.19:0,60,3424	0/0:28,0:28:84.29:0,84,5009	0/0:21,0:21:51.18:0,51,2715	1/1:5,33:38:84.29:3105,84,0	1/1:4,14:18:36.12:1334,36,0	0/0:39,0:39:99:0,111,6537	0/0:33,0:33:93.32:0,93,5337	0/0:20,0:20:54.19:0,54,3227	0/0:18,0:18:48.16:0,48,2772	0/0:15,0:15:42.14:0,42,2493	0/0:23,0:23:69.23:0,69,3752	0/0:27,0:27:72.25:0,72,4187	0/0:18,0:18:45.15:0,45,2191	1/1:3,10:13:27.09:1005,27,0	1/1:2,11:13:24.08:893,24,0	1/1:0,8:8:21.07:776,21,0	0/0:27,0:27:78.25:0,78,4513	0/0:29,0:29:81.28:0,81,4736	0/0:35,0:35:99:0,102,5798	0/0:23,0:23:69.24:0,69,3921
chr10	78659091	.	TAAAA	T	4018.60	PASS	AB=0.517;AC=15;AF=0.268;AN=56;BaseQRankSum=7.335;DP=515;FS=3.966;HRun=15;HaplotypeScore=93.2139;InbreedingCoeff=0.8729;MQ=63.90;MQ0=0;MQRankSum=-2.803;QD=28.50;ReadPosRankSum=5.235;VQSLOD=3.0850;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:2,26:30:27.73:829,0,28	0/0:11,0:13:39.13:0,39,872	0/0:15,0:13:26.14:0,26,321	0/0:5,0:2:3.01:0,3,61	0/0:29,0:35:96.23:0,96,1783	1/1:1,13:14:40.38:535,40,0	1/1:2,8:10:11.97:163,12,0	0/0:20,0:22:54.17:0,54,1056	0/0:13,0:14:42.06:0,42,858	0/0:23,0:23:45.15:0,45,961	0/0:13,0:18:51.17:0,51,1028	1/1:3,14:17:27.04:368,27,0	1/1:5,20:25:56.73:755,57,0	0/0:18,0:19:48.16:0,48,960	0/0:16,0:19:54.18:0,54,1112	0/0:14,0:18:42.14:0,42,925	0/0:27,0:27:69.19:0,69,1405	0/0:8,0:11:27.09:0,27,479	0/0:22,0:24:45.15:0,45,894	0/0:15,0:15:36.12:0,36,745	0/0:12,0:13:36.08:0,36,621	1/1:2,10:12:23.93:285,24,0	1/1:3,16:20:45.52:594,46,0	1/1:0,13:13:36.12:491,36,0	0/0:22,0:25:66.23:0,66,1404	0/0:7,0:20:33.17:0,33,202	0/0:23,0:23:63.22:0,63,1278	0/0:2,0:14:20.54:0,21,125
chr10	78659255	.	T	TA	8703.81	PASS	AC=20;AF=0.588;AN=34;BaseQRankSum=-12.071;DP=413;FS=2.292;HRun=3;HaplotypeScore=61.8614;InbreedingCoeff=0.9581;MQ=102.06;MQ0=0;MQRankSum=-4.592;QD=36.27;ReadPosRankSum=1.358;VQSLOD=5.5175;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,43:44:96.32:1344,96,0	./.	0/0:22,1:23:53.89:0,54,555	0/0:24,0:24:49.08:0,49,673	./.	1/1:1,16:17:45.15:630,45,0	1/1:0,18:18:54.18:756,54,0	./.	0/0:26,0:26:75.21:0,75,879	./.	./.	1/1:0,27:27:72.24:1008,72,0	1/1:2,32:34:87.29:1215,87,0	0/0:34,0:34:96.28:0,96,1141	./.	0/0:1,0:1:3.01:0,3,36	0/0:35,0:35:96.29:0,96,1151	0/0:26,0:26:68.15:0,68,766	./.	./.	./.	1/1:0,18:18:48.16:672,48,0	1/1:1,12:13:30.10:420,30,0	1/1:1,32:33:93.31:1302,93,0	./.	1/1:0,27:27:81.20:1064,81,0	./.	1/1:2,7:9:21.07:294,21,0
chr10	78659269	.	AG	A	426.23	PASS	AB=1.000;AC=19;AF=0.365;AN=52;BaseQRankSum=0.641;DP=440;FS=13.846;HRun=1;HaplotypeScore=72.9923;InbreedingCoeff=0.7260;MQ=101.48;MQ0=0;MQRankSum=-1.475;QD=17.05;ReadPosRankSum=-7.026;VQSLOD=0.9898;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,135,2127	1/1:1,0:1:3.01:41,3,0	0/0:23,0:23:66.21:0,66,1002	0/0:26,0:26:66.42:0,66,1034	1/1:2,0:2:5.99:51,6,0	0/0:16,0:16:48.16:0,48,756	0/0:27,0:27:81.26:0,81,1272	1/1:4,0:4:9:81,9,0	0/0:23,0:23:66.23:0,66,1052	1/1:1,0:1:3:29,3,0	./.	0/0:27,0:27:78.24:0,78,1217	0/0:35,0:35:99:0,102,1601	0/0:29,0:29:87.30:0,87,1391	1/1:1,0:1:3:25,3,0	0/1:3,0:3:38.94:50,0,39	0/0:36,0:36:99:0,108,1677	0/0:24,0:24:72.16:0,72,1095	1/1:4,1:5:14.99:134,15,0	1/1:1,0:1:3.01:41,3,0	1/1:0,4:4:3.01:41,3,0	0/0:14,0:14:42.14:0,42,668	0/0:14,0:14:36.12:0,36,571	0/0:37,0:37:99:0,111,1747	1/1:3,0:3:9.02:108,9,0	0/0:23,0:23:69.23:0,69,1082	./.	0/0:9,0:9:27.09:0,27,431
chr10	78659759	.	A	AG	5593.50	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=-6.974;DP=640;FS=0.403;HRun=5;HaplotypeScore=93.3032;InbreedingCoeff=0.2560;MQ=85.66;MQ0=1;MQRankSum=-0.428;QD=12.13;ReadPosRankSum=-0.880;VQSLOD=2.9871;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,29:34:75.23:969,75,0	0/0:6,0:6:0.01:0,0,3	0/0:45,0:33:78.31:0,78,572	0/0:36,0:27:26.32:0,26,279	0/1:19,0:19:6.19:6,0,22	1/1:1,19:20:42:526,42,0	1/1:0,10:10:21.07:275,21,0	1/1:31,0:31:4.76:161,5,0	0/0:15,0:15:42:0,42,400	0/1:18,0:18:16.03:68,0,16	0/1:17,0:17:13.87:14,0,43	1/1:3,18:21:40.60:517,41,0	1/1:2,17:20:51.16:662,51,0	0/0:20,0:20:54.02:0,54,534	0/1:27,0:27:9.96:14,0,10	0/1:29,0:29:25.12:65,0,25	0/0:32,0:32:84.09:0,84,860	0/0:24,0:24:69.06:0,69,699	1/1:17,0:17:3.31:81,3,0	0/1:25,0:25:14.06:74,0,14	0/1:24,0:24:4.69:17,0,5	1/1:3,12:15:28.17:313,28,0	1/1:0,15:15:30.09:394,30,0	1/1:2,36:38:90.28:1170,90,0	0/1:28,0:28:24.79:59,0,25	1/1:16,0:16:11.82:127,12,0	0/1:23,0:23:18.54:71,0,19	0/1:14,0:14:9.88:10,0,10
chr10	78659764	.	G	GA	1602.48	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=1.922;DP=629;FS=1.688;HRun=10;HaplotypeScore=107.2745;InbreedingCoeff=0.8472;MQ=83.13;MQ0=1;MQRankSum=-1.661;QD=9.26;ReadPosRankSum=3.571;VQSLOD=2.6175;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,1:35:55.40:404,55,0	0/0:6,0:6:17.97:0,18,145	0/0:45,0:32:53.82:0,54,403	0/0:32,0:24:6.23:0,6,129	0/0:20,0:20:53.51:0,54,428	1/1:20,1:21:28.07:203,28,0	0/1:11,0:11:18.05:73,0,18	0/0:26,0:26:59.29:0,59,474	0/0:16,0:17:31.97:0,32,246	0/0:15,0:15:35.62:0,36,281	0/0:16,0:16:38.94:0,39,320	1/1:19,1:20:18.07:191,18,0	1/1:19,0:19:30.33:249,30,0	0/0:19,0:19:41.88:0,42,341	0/0:33,0:33:86.01:0,86,639	0/0:28,0:28:74.24:0,74,592	0/0:30,0:30:77.85:0,78,633	0/0:22,0:23:61.96:0,62,498	0/0:18,0:18:43.78:0,44,330	0/0:26,0:26:62.69:0,63,503	0/0:23,0:23:59.92:0,60,492	1/1:14,1:15:1.03:103,1,0	1/1:17,0:17:22.53:139,23,0	1/1:34,0:35:84.89:432,85,0	0/0:26,0:26:68.88:0,69,562	0/0:15,0:15:26.45:0,26,206	0/0:22,0:22:53.53:0,54,428	0/0:15,0:15:41.61:0,42,324
chr10	78659865	.	A	AAG	1048.47	PASS	AB=0.535;AC=3;AF=0.054;AN=56;BaseQRankSum=-6.118;DP=580;FS=7.007;HRun=0;HaplotypeScore=66.4391;InbreedingCoeff=0.6003;MQ=78.74;MQ0=0;MQRankSum=-0.933;QD=37.45;ReadPosRankSum=0.565;VQSLOD=5.6521;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.12:0,54,717	0/0:8,0:8:24.08:0,24,335	0/0:14,0:14:36.09:0,36,468	0/0:12,0:12:30.10:0,30,413	0/0:29,0:29:84.23:0,84,1122	0/0:23,0:23:63.20:0,63,866	0/0:12,0:12:24.05:0,24,316	0/0:31,0:31:87.27:0,87,1174	0/0:17,0:17:42.12:0,42,570	0/0:30,0:30:75.25:0,75,1050	0/0:24,0:24:63.19:0,63,852	0/0:18,0:18:54.14:0,54,734	0/0:17,0:17:48.15:0,48,655	0/0:14,0:14:39.13:0,39,546	0/0:24,0:24:66.21:0,66,909	0/0:32,0:32:84.24:0,84,1126	0/0:24,0:23:63.20:0,63,866	0/0:21,0:21:51.16:0,51,692	0/0:18,0:18:45.15:0,45,630	0/0:29,0:29:87.23:0,87,1177	0/0:21,0:21:54.06:0,54,740	0/0:22,0:22:57.19:0,57,798	0/0:16,0:16:48.15:0,48,656	0/0:20,0:20:54.13:0,54,718	0/0:33,0:33:96.32:0,96,1344	0/1:3,20:23:17.85:984,0,18	0/0:23,0:23:66.18:0,66,888	1/1:0,5:5:9.03:162,9,0
chr10	78659978	.	CT	C	5797.24	PASS	AB=0.857;AC=41;AF=0.732;AN=56;BaseQRankSum=10.791;DP=522;FS=2.821;HRun=10;HaplotypeScore=121.1606;InbreedingCoeff=0.8974;MQ=74.06;MQ0=1;MQRankSum=-2.424;QD=15.22;ReadPosRankSum=3.089;VQSLOD=4.5967;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:15:26.48:78,26,0	1/1:2,6:8:17.99:156,18,0	0/1:10,2:11:28.77:29,0,145	0/0:18,0:18:36.43:0,36,328	1/1:3,16:20:47.02:397,47,0	1/1:0,0:18:30.56:90,31,0	1/1:1,0:12:20.15:59,20,0	1/1:7,27:34:77.96:673,78,0	0/0:15,0:15:45.12:0,45,498	1/1:7,15:22:44.98:391,45,0	1/1:4,19:23:53.97:469,54,0	1/1:3,0:19:29.95:87,30,0	1/1:0,0:9:18.33:54,18,0	0/0:17,0:18:41.16:0,41,482	1/1:3,16:19:47.98:417,48,0	1/1:1,13:14:38.99:339,39,0	0/0:27,0:27:69.16:0,69,746	0/0:22,0:22:57.12:0,57,617	1/1:3,21:24:62.94:540,63,0	1/1:3,25:28:74.98:651,75,0	1/1:2,10:12:26.99:234,27,0	1/1:0,0:21:38.48:113,38,0	1/1:0,0:18:34.63:102,35,0	1/1:0,0:7:10.19:30,10,0	1/1:3,13:16:35.99:312,36,0	0/0:22,1:24:39.94:0,40,645	1/1:4,25:29:51.27:578,51,0	0/0:16,0:17:38.94:0,39,412
chr10	78660173	.	GTT	G	14316.80	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=7.505;DP=682;FS=0.343;HRun=10;HaplotypeScore=127.6019;InbreedingCoeff=0.9727;MQ=70.30;MQ0=1;MQRankSum=0.066;QD=28.24;ReadPosRankSum=1.650;VQSLOD=4.1920;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:39:96.26:1070,96,0	1/1:1,7:8:17.93:201,18,0	0/0:13,0:16:25.69:0,26,238	0/0:4,0:5:3.92:0,4,24	1/1:4,26:30:78.18:869,78,0	1/1:1,28:29:72.19:803,72,0	1/1:0,21:21:57.15:635,57,0	1/1:6,28:34:78.16:860,78,0	0/0:15,0:15:45.14:0,45,691	1/1:4,22:26:66.17:735,66,0	1/1:0,19:19:51.05:551,51,0	1/1:1,20:21:57.15:635,57,0	1/1:0,19:19:54.15:601,54,0	0/0:23,0:23:60.20:0,60,931	1/1:2,31:33:90.24:1003,90,0	1/1:1,35:36:87.06:970,87,0	0/0:25,0:27:65.01:0,65,880	0/0:45,0:45:99:0,129,2020	1/1:4,10:14:27.06:301,27,0	1/1:2,31:33:90.23:1003,90,0	1/1:1,14:15:42.11:468,42,0	1/1:1,19:20:45.11:502,45,0	1/1:1,21:22:63.17:702,63,0	1/1:4,23:27:63.16:702,63,0	1/1:2,24:25:69.18:769,69,0	0/0:4,0:26:58.28:0,58,250	1/1:4,31:35:84.06:935,84,0	0/0:0,0:18:37.43:0,37,129
chr10	78661513	.	C	CA	2379.37	PASS	AB=0.838;AC=25;AF=0.446;AN=56;BaseQRankSum=-7.130;DP=640;FS=2.881;HRun=13;HaplotypeScore=97.1485;InbreedingCoeff=0.5866;MQ=70.69;MQ0=0;MQRankSum=-1.034;QD=7.60;ReadPosRankSum=0.290;VQSLOD=2.9425;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:19:35.67:306,36,0	0/0:12,0:12:32.73:0,33,226	0/1:26,1:18:3.52:4,0,84	0/0:24,0:14:8.75:0,9,106	0/0:32,2:34:21.20:0,21,384	1/1:3,15:20:38.72:335,39,0	0/1:5,8:13:17.09:143,0,17	0/0:26,0:29:42.42:0,42,278	0/1:24,5:29:9.19:9,0,377	0/0:23,2:25:25.59:0,26,321	0/0:21,0:21:37.17:0,37,248	1/1:5,5:10:8.90:63,9,0	1/1:9,17:26:23.85:205,24,0	0/0:19,0:20:47.37:0,47,303	0/0:24,0:24:43.50:0,44,293	0/0:27,3:30:24.37:0,24,304	0/1:16,4:20:39.13:39,0,201	1/1:4,13:18:15.20:260,15,0	0/0:26,1:29:4.79:0,5,302	0/1:29,3:35:20.08:20,0,296	0/0:10,1:11:23.75:0,24,164	1/1:4,18:24:23.48:378,23,0	1/1:8,19:28:13.21:392,13,0	1/1:3,16:19:3.96:321,4,0	0/0:33,2:39:16.97:0,17,377	1/1:6,1:14:16.21:78,16,0	0/0:26,1:29:23.46:0,23,290	1/1:4,1:10:5.68:29,6,0
chr10	78662380	.	C	CT	4918.80	PASS	AB=0.849;AC=45;AF=0.804;AN=56;BaseQRankSum=3.018;DP=608;FS=7.962;HRun=14;HaplotypeScore=118.2885;InbreedingCoeff=0.4466;MQ=69.02;MQ0=17;MQRankSum=-5.010;QD=9.53;ReadPosRankSum=-0.958;VQSLOD=3.1125;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,1:26:36.28:276,36,0	1/1:6,1:7:14.95:120,15,0	0/0:47,1:23:5.36:0,5,72	0/1:38,1:20:19.90:20,0,59	1/1:16,13:30:1.36:298,1,0	1/1:20,0:20:18.12:191,18,0	1/1:16,0:16:8.15:94,8,0	1/1:26,9:34:17.02:251,17,0	0/0:9,0:9:18.60:0,19,117	1/1:15,13:28:30.62:405,31,0	1/1:14,6:22:23.41:217,23,0	1/1:19,1:19:34.30:211,34,0	1/1:10,0:9:17.33:100,17,0	0/1:14,0:14:2.53:3,0,95	0/1:10,9:19:3.52:230,0,4	1/1:3,8:11:11.81:216,12,0	0/1:17,2:21:13.26:13,0,162	0/0:29,0:32:67.07:0,67,407	1/1:4,11:16:38.70:322,39,0	1/1:3,11:16:32.11:294,32,0	0/1:4,4:8:4.27:91,0,4	1/1:20,0:20:39.78:207,40,0	1/1:16,0:16:17.92:109,18,0	1/1:12,1:14:20.39:127,20,0	1/1:11,9:21:22.51:300,23,0	1/1:17,2:30:51.04:292,51,0	1/1:18,8:28:45.08:375,45,0	1/1:15,1:22:15.37:159,15,0
chr10	78662394	.	T	TTC	4371.93	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=-5.444;DP=625;FS=1.119;HRun=0;HaplotypeScore=127.0276;InbreedingCoeff=0.4508;MQ=62.29;MQ0=19;MQRankSum=1.837;QD=12.39;ReadPosRankSum=-0.032;VQSLOD=4.3009;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,16:33:62.41:931,62,0	0/1:10,0:10:18.12:18,0,120	0/0:53,0:16:16.28:0,16,181	0/1:51,0:21:4.10:4,0,171	0/0:29,0:29:48.61:0,49,370	1/1:5,10:16:28.57:525,29,0	1/1:7,4:12:13.51:309,14,0	0/1:22,0:22:43.86:44,0,182	0/0:13,0:13:34.58:0,35,350	0/0:29,0:29:25.58:0,26,382	0/1:19,0:19:13.41:13,0,182	1/1:16,6:22:42.70:517,43,0	1/1:3,6:8:23.86:320,24,0	0/0:12,0:12:33.91:0,34,349	0/0:20,0:20:40.90:0,41,309	0/0:13,0:13:29.78:0,30,155	0/0:25,0:25:73.78:0,74,671	0/0:34,0:33:99:0,99,1047	0/0:20,0:20:29.04:0,29,214	0/0:15,0:15:20.28:0,20,152	0/0:7,0:7:15.84:0,16,98	1/1:8,10:19:53.95:727,54,0	1/1:15,2:19:44.58:418,45,0	1/1:6,5:13:26.92:327,27,0	0/1:26,0:25:3.78:4,0,290	0/1:26,0:25:99:112,0,147	0/1:26,0:27:57.83:58,0,222	0/1:26,0:27:45.77:46,0,282
chr10	78662397	.	TC	T	60.18	PASS	AB=0.964;AC=9;AF=0.161;AN=56;BaseQRankSum=4.772;DP=612;FS=4.421;HRun=2;HaplotypeScore=131.3291;InbreedingCoeff=0.1669;MQ=61.59;MQ0=18;MQRankSum=-1.284;QD=0.34;ReadPosRankSum=4.311;VQSLOD=-0.2184;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:54.05:54,0,54	0/0:8,0:8:22.53:0,23,124	0/1:52,1:15:15.75:16,0,115	0/0:50,0:21:26:0,26,277	0/0:31,0:31:75.38:0,75,414	0/1:15,1:16:10.72:11,0,47	0/1:11,0:11:5:26,0,5	0/0:16,0:16:39.26:0,39,210	0/0:14,0:14:34:0,34,493	0/0:28,0:27:71.20:0,71,416	0/0:18,0:18:36.60:0,37,202	0/1:20,2:21:0.94:1,0,87	0/1:9,0:8:0.01:0,0,42	0/0:13,0:13:27.67:0,28,400	0/0:23,0:22:52.45:0,52,283	0/0:13,0:13:34.24:0,34,194	0/0:24,0:24:72.11:0,72,964	0/0:34,0:33:86.42:0,86,1209	0/0:20,0:20:49.71:0,50,287	0/0:15,0:15:19.42:0,19,137	0/0:7,0:7:14.22:0,14,90	0/0:20,0:19:12.97:0,13,150	1/1:19,0:19:11.69:66,12,0	0/1:13,1:14:17.32:17,0,18	0/0:25,0:24:52.36:0,52,310	0/0:26,0:25:69.12:0,69,396	0/0:22,0:22:46.59:0,47,268	0/0:26,0:26:54.61:0,55,338
chr10	78662399	.	CTT	C	5737.72	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-2.453;DP=606;FS=0.377;HRun=10;HaplotypeScore=120.3903;InbreedingCoeff=0.9827;MQ=61.53;MQ0=18;MQRankSum=-7.716;QD=21.02;ReadPosRankSum=0.723;VQSLOD=3.7271;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:35:55.52:0,56,244	1/1:1,8:9:21.05:234,21,0	0/0:53,0:15:14.63:0,15,222	0/0:50,0:21:25.37:0,25,274	1/1:6,24:30:48:535,48,0	0/0:10,0:17:28.33:0,28,140	0/0:5,0:12:29.94:0,30,147	1/1:4,11:15:30.05:334,30,0	0/0:13,0:13:39.13:0,39,608	1/1:11,17:28:51.04:546,51,0	1/1:4,12:16:33.07:368,33,0	0/0:15,1:21:32.93:0,33,217	0/0:6,0:8:12.73:0,13,47	0/0:10,0:12:29.07:0,29,397	1/1:8,15:22:17.48:410,17,0	1/1:4,9:13:24.04:267,24,0	0/0:24,0:24:63.21:0,63,998	0/0:33,0:33:95.24:0,95,1358	1/1:7,13:20:33.05:366,33,0	1/1:6,9:15:33.03:352,33,0	1/1:2,4:6:9.02:100,9,0	0/0:12,0:18:25.64:0,26,108	0/0:11,0:18:25.49:0,25,129	0/0:8,0:14:27.21:0,27,140	1/1:5,20:24:54.09:601,54,0	1/1:11,15:25:45.09:501,45,0	1/1:6,15:21:45.07:490,45,0	1/1:5,21:26:57.15:633,57,0
chr10	78662486	.	CT	C	3620.60	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-0.517;DP=528;FS=3.506;HRun=12;HaplotypeScore=86.4593;InbreedingCoeff=0.9548;MQ=65.80;MQ0=18;MQRankSum=-0.398;QD=13.26;ReadPosRankSum=1.987;VQSLOD=4.1153;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:39:77.07:0,77,407	1/1:5,4:9:11.93:93,12,0	0/0:15,0:8:23.99:0,24,221	0/0:9,0:6:11.88:0,12,99	1/1:15,11:23:11.70:244,12,0	0/0:4,0:18:43.25:0,43,264	0/0:3,0:14:31.40:0,31,168	1/1:12,10:18:23.79:185,24,0	0/0:16,1:17:8.81:0,9,240	1/1:11,10:18:8.40:248,8,0	1/1:4,22:26:32.25:429,32,0	0/0:4,0:20:28.41:0,28,143	0/0:3,0:15:25.90:0,26,161	0/0:11,0:10:21.04:0,21,208	1/1:9,11:19:34.86:261,35,0	1/1:3,6:9:19.96:145,20,0	0/0:14,0:14:32.97:0,33,315	0/0:21,1:22:27.49:0,27,411	1/1:6,11:17:34.85:258,35,0	1/1:5,16:21:7.45:244,7,0	1/1:3,9:12:22.94:168,23,0	0/0:4,0:15:31.57:0,32,183	0/0:8,0:24:44.34:0,44,246	0/0:5,0:15:25.60:0,26,160	1/1:8,13:20:47.79:369,48,0	1/1:5,14:19:41.83:325,42,0	1/1:3,29:32:65.67:511,66,0	1/1:9,3:13:19.92:140,20,0
chr10	78664978	.	TC	T	598.37	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.964;DP=526;FS=7.803;HRun=4;HaplotypeScore=54.9118;InbreedingCoeff=0.9433;MQ=85.74;MQ0=0;MQRankSum=-3.145;QD=27.20;ReadPosRankSum=-0.174;VQSLOD=2.2157;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:93.30:0,93,1283	0/0:2,0:2:6.02:0,6,84	0/0:19,0:19:54.11:0,54,672	0/0:24,0:24:57.17:0,57,754	0/0:18,0:18:44.99:0,45,611	0/0:21,0:21:57.18:0,57,779	0/0:26,0:26:78.25:0,78,1072	0/0:32,0:32:84.28:0,84,1174	0/0:17,0:17:51.17:0,51,712	0/0:13,0:13:39.13:0,39,546	0/0:6,0:6:18.03:0,18,232	0/0:25,0:25:72.20:0,72,968	0/0:15,0:15:39.13:0,39,545	0/0:18,0:18:51.14:0,51,680	0/0:21,0:21:63.20:0,63,864	0/0:18,0:18:51.17:0,51,714	0/0:25,0:25:69.23:0,69,964	0/0:19,0:19:57.19:0,57,798	0/0:13,0:13:36.07:0,36,462	0/0:12,0:12:36.12:0,36,502	0/0:38,0:38:99:0,111,1545	0/0:15,0:15:45.07:0,45,571	0/0:11,0:11:33.10:0,33,444	0/0:23,0:23:60.20:0,60,840	0/0:17,0:17:51.16:0,51,697	1/1:1,12:13:36.11:431,36,0	0/0:21,0:20:63.17:0,63,831	1/1:1,8:9:24.07:288,24,0
chr10	78665526	.	ACG	A	25670.99	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=12.356;DP=753;FS=4.224;HRun=0;HaplotypeScore=95.4886;InbreedingCoeff=0.9938;MQ=90.40;MQ0=2;MQRankSum=-6.379;QD=44.72;ReadPosRankSum=4.379;VQSLOD=6.4942;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,49:49:99:2100,129,0	1/1:0,6:6:12.04:196,12,0	0/0:23,0:23:66.23:0,66,1316	0/0:36,0:36:81.83:0,82,1731	1/1:0,19:19:54.18:878,54,0	1/1:0,32:32:87.30:1416,87,0	1/1:0,37:37:96.33:1565,96,0	1/1:0,36:36:99:1729,108,0	0/0:22,0:22:66.20:0,66,1259	1/1:0,19:19:57.19:930,57,0	1/1:0,22:22:54.18:881,54,0	1/1:0,35:35:99:1661,102,0	1/1:1,24:25:66.23:1069,66,0	0/0:36,0:36:99:0,105,2072	1/1:1,32:33:96.33:1562,96,0	1/1:1,15:16:45.15:734,45,0	0/0:37,0:37:99:0,111,2198	0/0:25,0:25:72.25:0,72,1461	1/1:0,23:23:69.22:1098,69,0	1/1:0,25:25:69.24:1125,69,0	1/1:0,19:18:48.16:783,48,0	1/1:1,19:20:54.18:881,54,0	1/1:0,27:27:81.28:1321,81,0	1/1:0,39:39:99:1615,99,0	1/1:1,18:19:54.18:874,54,0	1/1:0,25:25:75.22:1196,75,0	1/1:0,34:34:87.30:1419,87,0	1/1:0,13:13:39.13:636,39,0
chr10	78665622	.	CGT	C	592.82	PASS	AB=0.918;AC=21;AF=0.438;AN=48;BaseQRankSum=1.689;DP=606;FS=2.909;HRun=0;HaplotypeScore=82.0892;InbreedingCoeff=0.2539;MQ=65.78;MQ0=29;MQRankSum=0.100;QD=2.22;ReadPosRankSum=2.492;VQSLOD=1.7001;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:40:11.62:0,12,92	0/1:7,2:9:15.76:55,0,16	./.	./.	0/1:20,1:19:16.87:17,0,135	0/0:22,0:21:12.04:0,12,171	0/0:28,0:30:12.01:0,12,138	./.	0/1:16,1:17:16.89:17,0,121	1/1:13,0:12:2.50:9,2,0	0/0:19,0:19:11.99:0,12,173	1/1:18,4:22:15.04:159,15,0	1/1:14,3:17:11.86:109,12,0	0/1:15,0:15:5.08:5,0,79	0/0:15,0:15:9.02:0,9,114	0/1:17,2:18:53:63,0,53	0/0:21,0:32:11.29:0,11,77	0/0:17,0:16:20.61:0,21,113	0/0:33,0:30:5.98:0,6,48	0/0:14,0:13:6.02:0,6,86	0/1:48,1:47:1.84:2,0,288	0/1:13,2:15:25.87:26,0,38	1/1:11,1:12:3:32,3,0	1/1:25,5:30:26.07:243,26,0	0/0:20,0:21:14.69:0,15,133	1/1:21,0:21:1.72:4,2,0	./.	1/1:5,0:4:2.50:9,2,0
chr10	78668861	.	AC	A	20822.24	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=4.346;DP=827;FS=0.662;HRun=4;HaplotypeScore=87.4241;InbreedingCoeff=0.9958;MQ=82.91;MQ0=0;MQRankSum=-6.263;QD=31.64;ReadPosRankSum=4.492;VQSLOD=5.1347;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,57:60:99:1792,150,0	1/1:2,8:10:21.06:252,21,0	0/0:25,0:25:74.90:0,75,982	0/0:26,0:26:28.80:0,29,700	1/1:1,32:33:86.70:1006,87,0	1/1:0,13:13:36.11:432,36,0	1/1:0,27:27:66.20:792,66,0	1/1:1,34:35:96.24:1096,96,0	0/0:23,0:23:69.23:0,69,965	1/1:0,32:32:96.28:1140,96,0	1/1:0,27:27:75.23:899,75,0	1/1:3,48:51:99:1620,135,0	1/1:0,28:28:78.24:936,78,0	0/0:33,0:33:96.31:0,96,1326	1/1:1,40:41:99:1296,108,0	1/1:1,47:48:96.41:1578,96,0	0/0:35,0:34:99:0,102,1409	0/0:26,0:26:78.24:0,78,1065	1/1:5,21:26:63.12:726,63,0	1/1:0,34:34:90.18:1046,90,0	1/1:2,48:50:99:1548,129,0	1/1:2,23:25:66.20:792,66,0	1/1:1,17:18:45.14:538,45,0	1/1:1,19:20:54.16:645,54,0	1/1:0,25:25:66.20:792,66,0	1/1:0,31:31:93.28:1106,93,0	1/1:2,17:19:51.16:612,51,0	1/1:0,5:5:15.05:180,15,0
chr10	78669850	.	A	AC	208.59	PASS	AB=1.000;AC=21;AF=0.955;AN=22;DP=46;FS=0.000;HRun=5;HaplotypeScore=9.8818;InbreedingCoeff=0.0070;MQ=66.72;MQ0=0;QD=9.48;VQSLOD=-0.7335;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:2,0:2:2.98:22,3,0	1/1:4,1:5:8.87:64,9,0	./.	0/1:2,0:2:0:0,0,0	1/1:1,0:1:2.99:24,3,0	./.	1/1:3,0:3:3:25,3,0	./.	./.	1/1:1,1:2:2.88:15,3,0	./.	./.	1/1:0,1:1:2.94:18,3,0	./.	./.	./.	1/1:1,0:1:2.99:24,3,0	1/1:0,1:1:2.84:14,3,0	1/1:2,0:2:3:25,3,0	./.	1/1:2,0:2:5.99:48,6,0	./.	./.	./.
chr10	78670580	.	AC	A	2304.35	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-9.160;DP=536;FS=3.676;HRun=11;HaplotypeScore=85.6546;InbreedingCoeff=0.8684;MQ=78.09;MQ0=1;MQRankSum=1.641;QD=13.72;ReadPosRankSum=1.308;VQSLOD=4.0831;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:47.93:394,48,0	0/0:8,0:8:5.49:0,5,24	0/0:19,0:16:4.77:0,5,173	0/1:19,0:19:6.05:6,0,110	0/0:15,0:19:44.28:0,44,210	1/1:8,14:22:41.82:335,42,0	1/1:5,14:19:29.96:246,30,0	0/0:19,0:19:27.91:0,28,132	0/0:10,0:11:4.36:0,4,219	0/0:8,0:14:28.11:0,28,137	0/0:10,0:12:27.88:0,28,130	1/1:7,22:29:40.40:452,40,0	1/1:2,14:16:41.95:345,42,0	0/0:17,0:17:38.90:0,39,379	0/0:17,0:24:55.70:0,56,259	0/0:17,0:27:55.71:0,56,260	0/0:33,0:33:63.05:0,63,805	0/0:8,0:33:37.64:0,38,243	0/0:12,0:15:39.15:0,39,191	0/0:7,0:16:28.28:0,28,140	0/0:23,0:24:58.68:0,59,291	1/1:2,5:7:14.93:117,15,0	1/1:2,9:11:32.96:270,33,0	1/1:4,17:21:41.94:344,42,0	0/0:9,0:13:22.56:0,23,113	0/0:14,0:15:36.37:0,36,193	0/0:27,0:29:55.54:0,56,266	0/0:7,0:19:39.25:0,39,188
chr10	78670581	.	C	CA	6975.92	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-11.304;DP=541;FS=0.730;HRun=1;HaplotypeScore=72.9663;InbreedingCoeff=0.9278;MQ=79.42;MQ0=1;MQRankSum=-0.712;QD=24.14;ReadPosRankSum=0.532;VQSLOD=4.7517;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:53.27:0,53,357	1/1:1,7:8:8.98:100,9,0	0/0:21,0:18:35.15:0,35,341	0/0:21,0:20:41.42:0,41,337	1/1:8,10:18:47.86:554,48,0	0/0:22,0:22:59.38:0,59,421	0/0:19,0:19:41.56:0,42,299	1/1:3,17:20:53.89:535,54,0	0/0:12,0:12:33:0,33,367	1/1:8,4:12:33.06:365,33,0	1/1:2,10:12:33.05:387,33,0	0/0:28,0:28:65.15:0,65,455	0/0:17,0:17:44.30:0,44,288	0/0:17,0:17:42.90:0,43,540	1/1:9,16:25:56.24:691,56,0	1/1:10,17:27:60.11:731,60,0	0/0:33,0:33:95.38:0,95,1195	0/1:33,0:33:8.26:8,0,150	1/1:8,7:15:32.81:467,33,0	1/1:12,4:16:39.45:406,39,0	1/1:10,15:24:44.28:717,44,0	0/0:7,0:7:17.82:0,18,128	0/0:11,0:11:32.54:0,33,214	0/0:21,0:21:47.15:0,47,325	1/1:9,4:13:30.52:338,31,0	1/1:3,14:17:21.21:481,21,0	1/1:5,24:29:50.61:739,51,0	1/1:13,6:19:42.02:457,42,0
chr10	78673710	.	TTGTGTGTGTGTGTGTGTG	T	3531.03	PASS	AB=0.959;AC=30;AF=0.625;AN=48;BaseQRankSum=4.032;DP=702;FS=5.612;HRun=0;HaplotypeScore=344.2590;InbreedingCoeff=0.4562;MQ=56.47;MQ0=46;MQRankSum=-1.965;QD=8.47;ReadPosRankSum=1.602;VQSLOD=1.5103;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,1:31:7.94:206,0,8	1/1:9,2:11:3:144,3,0	./.	./.	1/1:18,0:17:3.46:26,3,0	0/1:17,0:17:0:0,0,0	0/1:29,0:28:44.72:45,0,90	0/0:31,0:29:5.94:0,6,45	0/0:12,0:13:18.06:0,18,925	0/1:22,0:24:99:113,0,161	./.	1/1:33,0:34:20.06:523,20,0	1/1:18,0:30:5.81:251,6,0	0/0:29,0:26:18.06:0,18,1341	1/1:17,9:27:18.06:846,18,0	1/1:24,8:31:3.01:144,3,0	0/0:27,0:22:33.11:0,33,1898	0/0:21,0:26:24.08:0,24,1140	1/1:19,0:18:0.47:1,0,0	1/1:17,6:20:8.99:309,9,0	1/1:38,0:34:9.46:78,9,0	1/1:12,0:21:5.98:144,6,0	1/1:14,0:11:3:26,3,0	./.	1/1:19,8:25:14.52:531,15,0	0/0:25,0:23:5.46:0,5,104	1/1:12,4:16:3.01:144,3,0	0/0:12,0:10:11.99:0,12,168
chr10	78674321	.	A	AGCCGTAGCTGT	67246.36	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-5.931;DP=713;FS=20.895;HRun=0;HaplotypeScore=215.0721;InbreedingCoeff=0.9805;MQ=85.17;MQ0=0;MQRankSum=-17.655;QD=121.38;ReadPosRankSum=2.046;VQSLOD=3.7838;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,25:60:99:6226,120,0	1/1:1,8:9:27.09:1566,27,0	0/0:43,0:43:99:0,126,3700	0/0:20,0:21:56.95:0,57,1446	1/1:8,14:24:48.08:2559,48,0	1/1:11,11:26:57.11:2997,57,0	1/1:7,10:19:45.15:2351,45,0	1/1:23,12:40:99:5503,120,0	0/0:21,0:21:60.19:0,60,2057	1/1:12,8:23:66.20:3035,66,0	1/1:4,9:19:30.10:1649,30,0	1/1:8,19:30:78.21:4366,78,0	1/1:8,14:24:60.21:3403,60,0	0/0:25,0:25:72.23:0,72,2465	1/1:12,14:28:69.07:3436,69,0	1/1:13,20:35:96.29:5152,96,0	0/0:26,0:26:75.26:0,75,2687	0/0:23,0:23:69.24:0,69,2414	1/1:13,4:18:54.13:2257,54,0	1/1:7,9:19:42.14:2373,42,0	1/1:12,10:25:36.12:2077,36,0	1/1:5,12:19:39.13:2255,39,0	1/1:4,9:15:11.12:1712,11,0	1/1:12,10:26:39.13:2252,39,0	1/1:8,13:23:51.11:2748,51,0	1/1:17,15:36:99:5195,108,0	1/1:8,15:32:68.91:3612,69,0	1/1:1,3:4:9.03:523,9,0
chr10	78675102	.	G	GA	6409.59	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-1.372;DP=647;FS=16.531;HRun=7;HaplotypeScore=68.2823;InbreedingCoeff=0.9977;MQ=81.28;MQ0=0;MQRankSum=-5.674;QD=30.82;ReadPosRankSum=2.365;VQSLOD=3.4840;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,44:47:99:1381,117,0	0/0:8,0:8:18.02:0,18,174	0/0:26,0:26:49.61:0,50,459	0/0:18,0:20:24.87:0,25,326	0/0:24,0:24:63.10:0,63,608	1/1:3,22:25:66.20:797,66,0	1/1:4,22:26:63.19:761,63,0	0/0:36,0:36:87.08:0,87,832	0/0:14,0:14:39.05:0,39,370	0/0:29,0:29:81.12:0,81,777	0/0:13,0:13:30.02:0,30,283	1/1:1,21:22:54.17:652,54,0	1/1:4,19:23:60.18:718,60,0	0/0:25,0:25:69.09:0,69,661	0/0:27,0:27:75.10:0,75,719	0/0:19,0:19:51.08:0,51,492	0/0:47,0:47:99:0,138,1311	0/0:31,0:30:81.04:0,81,763	0/0:10,0:10:24.03:0,24,227	0/0:18,0:18:54.09:0,54,521	0/0:21,0:21:54.08:0,54,521	1/1:2,21:23:54.17:652,54,0	1/1:0,9:9:27.08:326,27,0	1/1:1,32:32:93.29:1124,93,0	0/0:21,0:21:54.08:0,54,521	0/0:21,0:21:57.09:0,57,550	0/0:19,0:19:51.06:0,51,486	0/0:10,0:10:30.05:0,30,290
chr10	78675519	.	A	ATT	5062.15	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.962;DP=469;FS=3.562;HRun=6;HaplotypeScore=72.4940;InbreedingCoeff=0.9903;MQ=86.91;MQ0=0;MQRankSum=-3.518;QD=37.22;ReadPosRankSum=1.423;VQSLOD=4.6093;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:28:68.78:1081,69,0	0/0:5,0:5:15.05:0,15,183	0/0:15,0:15:39.05:0,39,436	0/0:19,0:19:38.85:0,39,444	0/0:11,0:11:33.09:0,33,389	1/1:0,9:9:27.05:426,27,0	1/1:4,14:19:36.12:609,36,0	0/0:25,0:25:69.21:0,69,833	0/0:16,0:16:48.13:0,48,573	0/0:21,0:21:60.18:0,60,730	0/0:16,0:16:42.08:0,42,489	1/1:2,12:14:33.11:545,33,0	1/1:0,7:7:21.07:355,21,0	0/0:20,0:20:57.18:0,57,695	0/0:13,0:13:36.11:0,36,439	0/0:16,0:16:45.13:0,45,537	0/0:37,0:37:99:0,111,1340	0/0:21,0:21:51.11:0,51,595	0/0:22,0:22:66.20:0,66,796	0/0:5,0:5:12.04:0,12,146	0/0:9,0:9:27.08:0,27,329	1/1:3,10:13:36.08:567,36,0	1/1:1,15:16:45.11:720,45,0	1/1:6,24:30:45.63:762,46,0	0/0:13,0:13:33.09:0,33,392	0/0:17,0:17:45.14:0,45,549	0/0:25,0:25:72.22:0,72,878	0/0:7,0:7:21.07:0,21,256
chr10	78675891	.	C	CTTT	5741.67	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-2.362;DP=535;FS=13.726;HRun=11;HaplotypeScore=145.6968;InbreedingCoeff=0.9708;MQ=69.75;MQ0=0;MQRankSum=2.726;QD=24.96;ReadPosRankSum=-4.461;VQSLOD=0.9152;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:86.76:0,87,720	1/1:10,0:10:26.47:243,26,0	0/0:20,0:12:14.72:0,15,136	0/0:18,0:13:9.32:0,9,82	1/1:18,1:19:45.21:538,45,0	0/0:11,0:11:17.82:0,18,146	0/0:21,0:20:34.40:0,34,296	1/1:32,1:34:61.93:677,62,0	0/0:23,0:23:48.08:0,48,552	1/1:20,0:21:51.10:737,51,0	1/1:7,0:7:8.39:46,8,0	0/0:29,0:29:54.61:0,55,489	0/0:22,0:22:39.71:0,40,294	0/0:16,0:16:32.95:0,33,385	1/1:17,1:18:41.89:466,42,0	1/1:16,0:16:38.66:505,39,0	0/0:31,0:34:84:0,84,933	0/0:14,0:14:36.06:0,36,421	1/1:16,0:16:28.92:281,29,0	1/1:12,0:12:20.68:257,21,0	1/1:20,0:20:36.48:462,36,0	0/0:18,0:18:40.25:0,40,352	0/0:5,0:5:8.95:0,9,78	0/0:30,0:28:50.26:0,50,425	1/1:12,0:12:29.21:253,29,0	1/1:14,1:17:42.01:540,42,0	1/1:16,0:16:35.73:411,36,0	1/1:12,0:12:32.90:326,33,0
chr10	78675902	.	TAAAAAAA	T	8095.39	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-5.335;DP=497;FS=7.344;HRun=10;HaplotypeScore=163.4106;InbreedingCoeff=0.9698;MQ=69.50;MQ0=0;MQRankSum=-12.001;QD=49.36;ReadPosRankSum=2.722;VQSLOD=1.7941;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,32:40:87.23:1966,87,0	0/0:8,0:9:27.09:0,27,385	0/0:29,0:14:30.56:0,31,750	0/0:19,0:10:25.44:0,25,437	0/0:16,0:19:54.17:0,54,764	1/1:2,8:10:18.03:430,18,0	1/1:2,18:20:48.16:1136,48,0	0/0:26,0:29:67.46:0,67,1060	0/0:16,0:19:48.16:0,48,1811	0/0:18,0:18:48.99:0,49,639	0/0:1,0:3:9.03:0,9,134	1/1:4,24:28:66.22:1565,66,0	1/1:0,21:22:54.19:1270,54,0	0/0:17,0:17:48.16:0,48,1733	0/0:16,0:17:48.11:0,48,693	0/0:14,0:14:42.13:0,42,567	0/0:31,0:31:81.28:0,81,3120	0/0:14,0:14:42.14:0,42,1635	0/0:10,0:12:36.11:0,36,502	0/0:7,0:8:21.51:0,22,274	0/0:14,0:16:37.92:0,38,503	1/1:5,10:15:30.09:705,30,0	1/1:1,2:3:6.02:144,6,0	1/1:8,18:26:39.07:880,39,0	0/0:8,0:11:33.11:0,33,489	0/0:17,0:18:45.08:0,45,580	0/0:14,0:17:51.16:0,51,669	0/0:11,0:13:27.08:0,27,389
chr10	78676207	.	CT	C	2767.35	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=16.543;DP=582;FS=11.963;HRun=1;HaplotypeScore=137.4410;InbreedingCoeff=0.9191;MQ=74.02;MQ0=0;MQRankSum=-15.525;QD=19.22;ReadPosRankSum=1.973;VQSLOD=2.7028;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:25:59.92:527,60,0	0/0:12,0:12:36.12:0,36,575	0/1:11,0:11:12.33:12,0,292	0/0:14,1:16:26.31:0,26,309	0/0:28,0:28:81.26:0,81,1267	1/1:1,16:17:47.78:372,48,0	1/1:2,14:16:47.69:370,48,0	0/0:35,0:35:99:0,105,1660	0/0:25,0:25:72.25:0,72,1143	0/0:27,0:27:75.26:0,75,1199	0/0:10,0:10:30.10:0,30,479	1/1:2,22:24:71.57:602,72,0	1/1:2,16:18:45.96:391,46,0	0/0:24,0:24:72.23:0,72,1118	0/0:28,0:28:84.25:0,84,1295	0/0:17,0:17:51.16:0,51,780	0/0:29,0:29:87.28:0,87,1360	0/0:24,0:24:72.18:0,72,1075	0/0:31,0:31:93.25:0,93,1367	0/0:17,0:17:48.14:0,48,741	0/0:38,0:38:99:0,114,1823	1/1:0,10:10:23.94:195,24,0	1/1:6,5:11:28.14:266,28,0	1/1:0,12:12:26.96:240,27,0	0/0:21,0:21:63.21:0,63,1007	0/0:22,0:22:66.22:0,66,1035	0/0:18,0:17:54.18:0,54,863	0/0:16,0:16:48.16:0,48,767
chr10	78676210	.	GTTCAA	G	4061.88	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=16.518;DP=571;FS=16.680;HRun=0;HaplotypeScore=175.8114;InbreedingCoeff=0.8515;MQ=72.62;MQ0=0;MQRankSum=-14.828;QD=26.72;ReadPosRankSum=2.672;VQSLOD=2.5883;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:57.17:708,57,0	0/0:12,0:12:33.11:0,33,1041	0/1:11,0:11:9.29:9,0,676	0/1:13,0:13:8.92:9,0,632	0/0:26,0:26:78.20:0,78,2474	1/1:1,16:17:45.41:564,45,0	1/1:2,14:16:46.87:539,47,0	0/0:36,0:36:99:0,108,3496	0/0:25,0:25:75.26:0,75,2454	0/0:27,0:27:78.27:0,78,2535	0/0:10,0:10:30.10:0,30,958	1/1:4,19:24:70.95:825,71,0	1/1:2,16:18:50.52:591,51,0	0/0:23,0:23:66.23:0,66,2185	0/0:28,0:28:84.27:0,84,2687	0/0:15,0:15:42.14:0,42,1374	0/0:31,0:31:93.31:0,93,2883	0/0:22,0:22:66.23:0,66,2113	0/0:31,0:31:93.32:0,93,2975	0/0:17,0:17:48.16:0,48,1528	0/0:39,0:39:99:0,116,3648	1/1:1,8:9:24.07:299,24,0	1/1:3,5:8:18.82:193,19,0	1/1:0,12:12:26.87:324,27,0	0/0:21,0:21:63.21:0,63,1954	0/0:22,0:22:66.22:0,66,2116	0/0:18,0:17:54.19:0,54,1776	0/0:16,0:16:48.16:0,48,1598
chr10	78676216	.	GCT	G	3176.05	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.078;DP=543;FS=12.798;HRun=0;HaplotypeScore=136.7237;InbreedingCoeff=0.9963;MQ=73.32;MQ0=0;MQRankSum=-15.418;QD=27.62;ReadPosRankSum=3.280;VQSLOD=4.4004;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:57.09:589,57,0	0/0:11,0:11:30.10:0,30,561	0/0:13,0:13:35.99:0,36,594	0/0:10,0:10:25.33:0,25,399	0/0:23,0:23:69.24:0,69,1291	1/1:0,16:16:48.12:508,48,0	1/1:0,14:14:42.11:452,42,0	0/0:35,0:35:99:0,102,1820	0/0:24,0:24:69.24:0,69,1292	0/0:26,0:26:69.23:0,69,1260	0/0:10,0:10:30.10:0,30,562	1/1:3,19:22:66.05:662,66,0	1/1:0,16:16:48.08:501,48,0	0/0:23,0:23:69.24:0,69,1292	0/0:29,0:29:87.30:0,87,1630	0/0:13,0:13:39.13:0,39,728	0/0:27,0:27:81.23:0,81,1450	0/0:20,0:20:60.18:0,60,1078	0/0:30,0:30:87.29:0,87,1601	0/0:17,0:17:45.15:0,45,842	0/0:36,0:36:99:0,108,1991	1/1:0,8:8:24.06:253,24,0	1/1:0,5:5:15.03:155,15,0	1/1:1,12:13:27:265,27,0	0/0:20,0:20:60.21:0,60,1108	0/0:23,0:24:72.25:0,72,1320	0/0:21,0:20:60.19:0,60,1093	0/0:16,0:16:48.16:0,48,899
chr10	78676993	.	T	TGGTGTGG	2096.86	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.303;DP=767;FS=0.000;HRun=0;HaplotypeScore=197.2093;InbreedingCoeff=0.9463;MQ=44.77;MQ0=38;MQRankSum=-7.282;QD=15.77;ReadPosRankSum=-4.522;VQSLOD=1.9159;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,2:28:56.05:763,56,0	0/0:6,0:6:12.04:0,12,280	0/0:100,0:7:14.96:0,15,205	0/0:96,0:12:17.73:0,18,463	0/0:22,0:20:47.24:0,47,799	1/1:18,1:19:18.87:288,19,0	1/1:16,1:16:30:273,30,0	0/0:35,0:35:90.19:0,90,1875	0/0:18,0:18:51.10:0,51,1001	0/0:18,0:17:48.16:0,48,1262	0/0:11,0:10:28.18:0,28,442	1/1:14,0:15:32.73:411,33,0	1/1:9,0:9:2.72:125,3,0	0/0:21,0:21:54.17:0,54,1323	0/0:27,0:27:63.44:0,63,1037	0/0:15,0:15:32.98:0,33,528	0/0:38,0:38:99:0,108,2415	0/0:45,0:44:99:0,129,2841	0/0:18,0:17:44.28:0,44,826	0/0:16,0:16:43.78:0,44,886	0/0:63,0:60:99:0,136,2808	1/1:18,1:18:18.77:140,19,0	1/1:12,1:14:19.86:229,20,0	1/1:9,1:10:9.11:66,9,0	0/0:24,0:24:39.04:0,39,874	0/0:23,0:22:66.16:0,66,1354	0/0:19,0:18:45.13:0,45,1041	0/0:16,0:15:33.11:0,33,797
chr10	78676998	.	T	TTG	2123.75	PASS	AB=0.805;AC=24;AF=0.444;AN=54;BaseQRankSum=-1.008;DP=752;FS=0.561;HRun=0;HaplotypeScore=149.4888;InbreedingCoeff=0.4421;MQ=46.02;MQ0=38;MQRankSum=0.215;QD=5.35;ReadPosRankSum=-2.701;VQSLOD=2.8171;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:28:17.28:80,17,0	0/0:2,0:7:2.54:0,3,14	0/0:97,0:6:3.01:0,3,33	0/1:92,0:13:12.18:12,0,49	0/0:15,0:22:11.04:0,11,53	1/1:17,0:19:11.02:79,11,0	1/1:13,0:15:16.95:112,17,0	0/1:23,7:29:8.27:256,0,8	0/0:17,0:17:35.83:0,36,393	0/0:9,0:19:11.22:0,11,78	0/0:5,0:10:2.84:0,3,14	1/1:11,0:13:8.74:63,9,0	1/1:9,0:8:5.77:34,6,0	0/0:18,0:20:26.89:0,27,278	0/0:13,0:24:13.99:0,14,68	0/0:6,0:12:5.49:0,5,26	0/0:36,0:37:64.83:0,65,708	0/0:40,0:41:74.82:0,75,805	1/1:14,5:18:14.26:193,14,0	0/1:11,4:16:30.74:133,0,31	0/1:34,35:68:99:709,0,106	./.	1/1:11,0:12:8.32:47,8,0	0/1:8,0:10:0.01:0,0,0	0/0:6,0:23:25.05:0,25,122	1/1:17,7:23:1.18:219,1,0	0/1:12,6:18:7.23:134,0,7	1/1:7,9:15:15.05:233,15,0
chr10	78677048	.	TCTGATG	T	4399.58	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.885;DP=482;FS=0.000;HRun=0;HaplotypeScore=126.8474;InbreedingCoeff=0.9427;MQ=57.45;MQ0=5;MQRankSum=-11.953;QD=46.80;ReadPosRankSum=-5.062;VQSLOD=3.7336;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,12:16:30.02:619,30,0	0/0:11,0:11:33.11:0,33,1171	0/0:6,0:2:6.02:0,6,74	0/0:13,0:5:11.86:0,12,234	0/0:18,0:17:45.15:0,45,1597	1/1:0,18:18:42.14:967,42,0	1/1:4,7:11:21:388,21,0	0/0:28,0:28:72.25:0,72,2522	0/0:18,0:18:51.18:0,51,1771	0/0:21,0:20:60.21:0,60,2119	0/0:10,0:9:27.09:0,27,926	1/1:2,14:16:36.12:829,36,0	1/1:1,6:7:15.05:354,15,0	0/0:20,0:20:60.21:0,60,2066	0/0:22,0:21:48.16:0,48,1666	0/0:15,0:15:36.12:0,36,1279	0/0:37,0:37:99:0,102,3624	0/0:29,0:28:78.27:0,78,2778	0/0:13,0:13:39.13:0,39,1291	0/0:13,0:13:39.13:0,39,1365	0/0:45,0:45:99:0,102,3536	1/1:0,10:10:27.09:591,27,0	1/1:2,10:12:29.91:630,30,0	1/1:1,3:4:2.97:20,3,0	0/0:29,0:29:66.23:0,66,2352	0/0:21,0:21:63.21:0,63,2123	0/0:10,0:10:24.08:0,24,854	0/0:9,0:8:21.07:0,21,748
chr10	78677136	.	CTT	C	2274.89	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=6.583;DP=548;FS=15.731;HRun=13;HaplotypeScore=108.9316;InbreedingCoeff=0.9008;MQ=54.73;MQ0=6;MQRankSum=-3.107;QD=15.17;ReadPosRankSum=6.515;VQSLOD=0.7162;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,22:28:53.93:573,54,0	0/0:4,0:5:15:0,15,149	0/1:10,0:8:6.14:6,0,86	0/0:10,0:10:17.51:0,18,181	0/0:20,0:28:34.75:0,35,334	1/1:9,10:19:30:291,30,0	1/1:9,9:17:27.01:262,27,0	0/0:9,0:24:41.08:0,41,422	0/0:15,0:15:27.09:0,27,390	0/0:11,0:25:50:0,50,479	0/0:4,0:12:26.92:0,27,241	1/1:4,10:14:33.04:319,33,0	1/1:4,7:11:12.85:141,13,0	0/0:21,1:24:20.59:0,21,483	0/0:11,0:24:27.91:0,28,261	0/0:6,0:21:32.95:0,33,302	0/0:30,0:31:59.04:0,59,712	0/0:26,1:31:39.05:0,39,797	0/0:17,0:28:55.57:0,56,610	0/0:14,0:18:36.41:0,36,324	0/0:9,0:16:15.03:0,15,155	1/1:4,12:16:32.98:320,33,0	1/1:7,7:15:20.94:202,21,0	1/1:2,16:19:38.82:366,39,0	0/0:16,0:22:42.90:0,43,390	0/0:21,0:30:50.94:0,51,489	0/0:5,0:9:5.63:0,6,66	0/0:4,0:14:26.93:0,27,238
chr10	78677524	.	CA	C	4029.01	PASS	AB=0.762;AC=43;AF=0.768;AN=56;BaseQRankSum=5.854;DP=569;FS=4.018;HRun=13;HaplotypeScore=94.0733;InbreedingCoeff=0.2123;MQ=66.78;MQ0=3;MQRankSum=-2.571;QD=7.69;ReadPosRankSum=3.814;VQSLOD=3.0906;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:13:14.81:45,15,0	1/1:0,10:10:23.85:175,24,0	0/1:24,0:18:5.21:5,0,126	0/1:15,0:11:8.69:9,0,61	1/1:3,11:16:7.81:179,8,0	1/1:3,0:14:20.36:60,20,0	1/1:2,0:15:24.90:74,25,0	0/1:8,15:24:4.85:223,0,5	0/0:21,2:26:9.93:0,10,388	1/1:7,11:19:11.77:220,12,0	0/1:9,10:22:1.01:139,0,1	1/1:4,0:20:33.49:102,33,0	1/1:2,0:14:25.36:78,25,0	0/0:17,0:19:38.20:0,38,389	1/1:14,22:38:60.64:427,61,0	1/1:9,30:42:60.41:579,60,0	0/1:23,3:26:4.09:4,0,427	0/1:15,2:17:2.11:2,0,266	1/1:5,9:15:8.53:209,9,0	0/1:5,13:19:22.30:184,0,22	1/1:7,23:30:23.53:327,24,0	1/1:4,0:14:22.40:66,22,0	1/1:0,0:16:29.63:92,30,0	1/1:2,0:16:20.36:60,20,0	1/1:6,14:20:0.60:168,1,0	0/1:13,16:30:27.86:278,0,28	1/1:8,11:20:9.93:199,10,0	0/1:6,9:15:44.28:123,0,44
chr10	78677567	.	T	TTCTAAATGGGATGGAGACCTGCTACAA	23048.27	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=2.095;DP=523;FS=14.041;HRun=0;HaplotypeScore=344.0579;InbreedingCoeff=0.9969;MQ=85.17;MQ0=0;MQRankSum=-12.652;QD=256.09;ReadPosRankSum=2.436;VQSLOD=3.7012;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,5:10:21.07:2354,21,0	0/0:13,0:13:39.13:0,39,2485	0/0:27,0:27:60.02:0,60,2465	0/0:15,0:15:36.96:0,37,2149	0/0:15,0:14:42.14:0,42,2682	1/1:8,1:9:27.05:2199,27,0	1/1:9,0:9:27.05:2669,27,0	0/0:30,0:30:81.27:0,81,4452	0/0:24,0:24:72.22:0,72,3811	0/0:34,0:34:99:0,102,6329	0/0:18,0:18:54.14:0,54,3135	1/1:11,1:13:36.12:3494,36,0	1/1:8,1:9:24.08:2394,24,0	0/0:15,0:15:45.15:0,45,2923	0/0:32,0:32:90.28:0,90,5187	0/0:30,0:30:81.26:0,81,4102	0/0:20,0:20:60.15:0,60,3681	0/0:18,0:18:54.14:0,54,3604	0/0:21,0:21:60.21:0,60,2828	0/0:28,0:28:78.25:0,78,4319	0/0:24,0:24:60.17:0,60,3693	1/1:17,2:18:51.09:4166,51,0	1/1:11,1:13:39.13:3808,39,0	1/1:6,2:8:18.06:1963,18,0	0/0:11,0:11:24.08:0,24,1575	0/0:24,0:24:72.25:0,72,4721	0/0:17,0:17:48.15:0,48,2989	0/0:17,0:17:48.16:0,48,3575
chr10	78677710	.	TGG	T	3723.48	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.815;DP=504;FS=39.065;HRun=8;HaplotypeScore=90.5018;InbreedingCoeff=0.9695;MQ=66.14;MQ0=1;MQRankSum=-11.791;QD=30.03;ReadPosRankSum=-1.303;VQSLOD=1.0247;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,19:26:57.13:672,57,0	0/0:7,0:7:21.07:0,21,355	0/0:18,0:17:48.16:0,48,800	0/0:10,0:9:4.13:0,4,191	0/0:22,0:22:54.18:0,54,909	1/1:2,8:10:27.08:329,27,0	1/1:3,14:17:39.12:473,39,0	0/0:29,0:29:69.22:0,69,1102	0/0:23,0:23:57.20:0,57,962	0/0:23,0:23:57.18:0,57,937	0/0:17,0:17:36.12:0,36,600	1/1:3,15:18:48.15:585,48,0	1/1:3,10:13:33.10:401,33,0	0/0:21,0:21:57.20:0,57,964	0/0:19,0:19:57.19:0,57,935	0/0:23,0:23:57.18:0,57,935	0/0:22,0:22:63.22:0,63,1065	0/0:24,0:24:65.79:0,66,1032	0/0:20,0:19:48.12:0,48,759	0/0:25,0:25:66.21:0,66,1076	0/0:10,0:10:30.10:0,30,502	1/1:2,11:13:36.11:438,36,0	1/1:5,16:21:57.05:643,57,0	1/1:0,6:6:15.04:183,15,0	0/0:19,0:19:48.16:0,48,811	0/0:32,0:32:84.29:0,84,1413	0/0:11,0:11:30.09:0,30,474	0/0:5,0:5:15.04:0,15,228
chr10	78677717	.	GGT	G	1661.75	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=15.111;DP=493;FS=30.795;HRun=0;HaplotypeScore=98.6673;InbreedingCoeff=0.8088;MQ=64.05;MQ0=1;MQRankSum=-11.651;QD=13.19;ReadPosRankSum=-0.772;VQSLOD=1.5026;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,2:27:21.14:352,21,0	0/0:7,0:7:21.07:0,21,405	0/0:21,0:20:60.18:0,60,1044	0/0:10,0:9:3.82:0,4,318	0/0:20,0:20:57.16:0,57,1005	0/1:12,0:11:3.51:142,0,4	1/1:14,0:14:37.72:222,38,0	0/0:30,0:30:87.25:0,87,1453	0/0:19,0:19:57.20:0,57,1071	0/0:22,0:22:64.08:0,64,1057	0/0:14,0:14:39.09:0,39,661	1/1:17,0:17:31.19:283,31,0	1/1:12,0:12:32.05:188,32,0	0/0:19,0:19:57.20:0,57,1082	0/0:18,0:18:54.19:0,54,1035	0/0:20,0:20:60.16:0,60,1046	0/0:21,0:21:63.22:0,63,1213	0/0:24,0:24:65.68:0,66,1153	0/0:22,0:21:60.15:0,60,981	0/0:23,0:23:66.20:0,66,1139	0/0:13,0:13:39.04:0,39,639	1/1:14,0:14:29.30:248,29,0	1/1:18,3:21:22.29:339,22,0	0/1:9,0:9:43.05:79,0,43	0/0:17,0:17:51.15:0,51,886	0/0:29,0:29:87.29:0,87,1638	0/0:13,0:13:36.01:0,36,551	0/0:5,0:5:12.04:0,12,231
chr10	78677725	.	C	CAACATG	10415.41	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.197;DP=497;FS=29.062;HRun=0;HaplotypeScore=113.4266;InbreedingCoeff=0.9935;MQ=64.31;MQ0=0;MQRankSum=-13.958;QD=78.31;ReadPosRankSum=-1.233;VQSLOD=3.1447;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,16:29:63.22:2172,63,0	0/0:8,0:8:24.08:0,24,552	0/0:20,0:20:56.98:0,57,1263	0/0:13,0:13:28.02:0,28,569	0/0:19,0:19:48.11:0,48,1100	1/1:2,10:12:33.11:1041,33,0	1/1:12,6:18:39.13:1187,39,0	0/0:31,0:31:90.28:0,90,1971	0/0:17,0:17:51.15:0,51,1176	0/0:22,0:22:66.21:0,66,1524	0/0:13,0:13:33.11:0,33,793	1/1:4,12:18:48.15:1564,48,0	1/1:4,6:10:24.08:787,24,0	0/0:17,0:17:48.15:0,48,1100	0/0:18,0:18:51.14:0,51,1131	0/0:19,0:19:57.17:0,57,1277	0/0:22,0:22:66.21:0,66,1507	0/0:21,0:21:60.21:0,60,1418	0/0:22,0:22:60.20:0,60,1381	0/0:23,0:23:69.24:0,69,1586	0/0:15,0:15:39.10:0,39,821	1/1:2,11:14:39.13:1304,39,0	1/1:8,13:21:45.15:1501,45,0	1/1:1,8:10:24.08:860,24,0	0/0:21,0:21:60.19:0,60,1328	0/0:28,0:28:84.27:0,84,1925	0/0:11,0:11:33.10:0,33,744	0/0:4,0:4:12.04:0,12,288
chr10	78677863	.	T	TAA	5850.66	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-8.536;DP=571;FS=3.914;HRun=8;HaplotypeScore=68.8391;InbreedingCoeff=0.9963;MQ=83.38;MQ0=0;MQRankSum=-3.305;QD=36.57;ReadPosRankSum=1.355;VQSLOD=4.8548;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,40:45:99:1811,115,0	0/0:10,0:10:27.07:0,27,301	0/0:25,0:25:57.11:0,57,622	0/0:22,0:24:15.09:0,15,507	0/0:20,0:20:51.05:0,51,544	1/1:1,19:20:48.16:759,48,0	1/1:2,16:19:42.14:667,42,0	0/0:24,0:24:60.11:0,60,641	0/0:18,0:18:39.08:0,39,435	0/0:22,0:22:60.16:0,60,669	0/0:14,0:14:42.07:0,42,446	1/1:3,13:16:30.10:476,30,0	1/1:2,9:11:30.10:471,30,0	0/0:13,0:13:39.11:0,39,435	0/0:15,0:15:42.11:0,42,468	0/0:15,0:15:42.11:0,42,468	0/0:25,0:25:69.18:0,69,769	0/0:29,0:29:84.22:0,84,936	0/0:20,0:20:48.08:0,48,510	0/0:20,0:20:51.13:0,51,569	0/0:21,0:21:57.10:0,57,614	1/1:2,10:12:24.08:381,24,0	1/1:2,10:12:24.08:381,24,0	1/1:2,23:25:57.19:905,57,0	0/0:24,0:24:60.13:0,60,669	0/0:21,0:22:51.06:0,51,627	0/0:20,0:20:54.13:0,54,593	0/0:30,0:30:63.10:0,63,681
chr10	78678059	.	T	TA	5001.90	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=6.662;DP=495;FS=3.435;HRun=6;HaplotypeScore=61.5857;InbreedingCoeff=0.9863;MQ=82.38;MQ0=0;MQRankSum=-0.578;QD=33.35;ReadPosRankSum=1.851;VQSLOD=5.2032;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:69.22:868,69,0	0/0:7,0:7:21.03:0,21,207	0/0:16,0:16:41.11:0,41,395	0/0:18,0:18:25.72:0,26,250	0/0:4,0:4:9.02:0,9,92	1/1:0,18:18:54.17:679,54,0	1/1:0,21:21:60.19:755,60,0	0/0:23,0:23:48.10:0,48,490	0/0:20,0:20:57.13:0,57,581	0/0:13,0:13:33.07:0,33,337	0/0:6,0:6:18.04:0,18,184	1/1:0,22:22:57.18:718,57,0	1/1:1,17:18:45.12:551,45,0	0/0:16,0:16:45.10:0,45,459	0/0:25,0:25:72.16:0,72,732	0/0:25,0:25:69.13:0,69,691	0/0:37,0:37:88.03:0,88,879	0/0:19,0:19:48.10:0,48,489	0/0:15,0:15:38.95:0,39,374	0/0:9,0:9:24.05:0,24,245	0/0:13,0:13:24.04:0,24,245	1/1:2,7:9:21.07:264,21,0	1/1:0,10:10:24.08:302,24,0	1/1:2,24:26:69.22:865,69,0	0/0:18,0:18:45.10:0,45,459	0/0:17,0:17:39.09:0,39,398	0/0:24,0:24:66.15:0,66,673	0/0:20,0:20:48.10:0,48,487
chr10	78678667	.	CTG	C	5319.91	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.704;DP=625;FS=4.422;HRun=0;HaplotypeScore=118.7967;InbreedingCoeff=0.9996;MQ=96.57;MQ0=0;MQRankSum=-15.034;QD=37.46;ReadPosRankSum=0.121;VQSLOD=6.6687;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:66.18:983,66,0	0/0:16,0:16:48.16:0,48,911	0/0:27,0:27:78.20:0,78,1350	0/0:39,0:39:75.52:0,76,1866	0/0:33,0:33:99:0,99,1858	1/1:1,18:19:48.16:733,48,0	1/1:0,16:16:47.71:671,48,0	0/0:42,0:42:99:0,123,2347	0/0:20,0:20:60.18:0,60,1102	0/0:23,0:23:69.23:0,69,1303	0/0:20,0:20:60.19:0,60,1110	1/1:1,21:22:57.19:871,57,0	1/1:0,17:17:51.17:779,51,0	0/0:29,0:29:87.30:0,87,1680	0/0:23,0:23:69.24:0,69,1331	0/0:23,0:23:69.22:0,69,1298	0/0:20,0:20:60.21:0,60,1159	0/0:15,0:15:45.15:0,45,869	0/0:12,0:11:33.10:0,33,606	0/0:22,0:22:66.20:0,66,1191	0/0:35,0:35:99:0,105,2027	1/1:0,12:12:27.01:360,27,0	1/1:0,15:15:36.04:498,36,0	1/1:1,15:16:29.68:425,30,0	0/0:20,0:20:60.21:0,60,1145	0/0:25,0:25:75.06:0,75,1313	0/0:26,0:26:78.22:0,78,1467	0/0:13,0:13:39.13:0,39,753
chr10	78678913	.	TG	T	2731.68	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.978;DP=519;FS=10.663;HRun=2;HaplotypeScore=153.6973;InbreedingCoeff=0.9966;MQ=74.29;MQ0=1;MQRankSum=-13.171;QD=27.59;ReadPosRankSum=0.497;VQSLOD=2.0104;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:45.07:541,45,0	0/0:10,0:10:30.07:0,30,426	0/0:11,0:11:27.08:0,27,375	0/0:13,0:13:36.02:0,36,429	0/0:28,0:28:81.27:0,81,1207	1/1:1,15:16:45.14:555,45,0	1/1:0,9:8:24.08:296,24,0	0/0:27,0:27:78.25:0,78,1134	0/0:22,0:22:66.21:0,66,968	0/0:15,0:15:45.15:0,45,657	0/0:30,0:30:90.29:0,90,1327	1/1:0,15:14:36.11:440,36,0	1/1:0,8:8:24.08:299,24,0	0/0:12,0:12:36.12:0,36,539	0/0:23,0:23:66.22:0,66,988	0/0:29,0:29:87.29:0,87,1304	0/0:38,0:38:99:0,114,1648	0/0:21,0:21:60.20:0,60,899	0/0:14,0:14:39.11:0,39,547	0/0:16,0:16:45.13:0,45,634	0/0:26,0:26:72.23:0,72,1059	1/1:0,8:8:21.07:258,21,0	1/1:1,11:11:27.08:329,27,0	1/1:0,11:11:18.06:222,18,0	0/0:23,0:23:66.22:0,66,982	0/0:19,0:19:51.17:0,51,764	0/0:34,0:34:99:0,99,1483	0/0:9,0:9:27.06:0,27,361
chr10	78678995	.	T	TA	9094.87	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=8.029;DP=580;FS=4.377;HRun=8;HaplotypeScore=111.1295;InbreedingCoeff=0.9752;MQ=62.78;MQ0=1;MQRankSum=-2.331;QD=29.24;ReadPosRankSum=-2.061;VQSLOD=3.0363;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:30:74.06:0,74,664	1/1:1,6:7:21.06:241,21,0	0/0:11,0:11:10.54:0,11,138	0/0:8,0:7:5.51:0,6,53	1/1:5,30:35:90.26:1031,90,0	0/0:34,0:34:78.03:0,78,711	0/0:14,0:14:33:0,33,302	1/1:12,17:29:69.19:781,69,0	0/0:28,0:28:50.50:0,50,632	1/1:2,22:24:72.21:831,72,0	1/1:8,15:23:60.17:682,60,0	0/0:20,0:20:57.02:0,57,516	0/0:11,0:11:30:0,30,269	0/0:11,0:11:26.99:0,27,241	1/1:4,26:30:81.21:912,81,0	1/1:8,14:23:56.99:629,57,0	0/0:29,0:29:74.99:0,75,674	0/0:22,0:22:60.01:0,60,544	1/1:5,12:17:45.10:504,45,0	1/1:3,23:26:78.22:884,78,0	1/1:5,7:12:23.90:257,24,0	0/0:15,0:15:45.02:0,45,411	0/0:22,0:21:48.02:0,48,439	0/0:13,0:13:36:0,36,323	1/1:5,14:19:51.13:572,51,0	1/1:9,19:27:60.17:685,60,0	1/1:6,23:29:81.15:913,81,0	1/1:3,6:9:15.04:173,15,0
chr10	78679033	.	T	TA	12167.43	PASS	AB=0.600;AC=43;AF=0.768;AN=56;BaseQRankSum=-2.473;DP=631;FS=12.318;HRun=9;HaplotypeScore=95.0032;InbreedingCoeff=0.8651;MQ=71.49;MQ0=0;MQRankSum=-3.716;QD=23.81;ReadPosRankSum=1.613;VQSLOD=4.4633;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:29:66.18:730,66,0	1/1:1,8:9:21.06:232,21,0	0/0:17,0:18:29:0,29,270	0/0:10,0:10:17.01:0,17,155	1/1:9,24:33:19.92:624,20,0	1/1:4,25:29:14.17:611,14,0	1/1:4,11:15:4.06:273,4,0	1/1:6,36:41:99:1121,106,0	0/0:24,0:24:59.98:0,60,521	1/1:5,20:25:63.16:688,63,0	1/1:5,20:25:40.04:644,40,0	1/1:3,18:21:51.14:564,51,0	1/1:2,10:12:30.08:332,30,0	0/0:17,0:17:35.96:0,36,312	1/1:3,32:35:58.17:869,58,0	1/1:5,20:25:54.15:597,54,0	0/0:28,0:28:43.66:0,44,570	0/0:23,0:23:53.92:0,54,456	1/1:10,14:24:22.05:456,22,0	1/1:7,23:30:69.10:736,69,0	0/1:3,6:9:34.06:115,0,34	1/1:2,14:16:36.10:398,36,0	1/1:4,22:26:29.27:627,29,0	1/1:1,12:13:24.06:265,24,0	1/1:3,20:23:48.13:531,48,0	1/1:4,23:26:43.12:696,43,0	1/1:3,25:28:57.15:630,57,0	1/1:3,12:15:41.73:429,42,0
chr10	78679517	.	CA	C	18855.65	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=10.168;DP=674;FS=0.706;HRun=2;HaplotypeScore=70.2059;InbreedingCoeff=0.9997;MQ=79.56;MQ0=0;MQRankSum=-2.695;QD=35.85;ReadPosRankSum=1.449;VQSLOD=5.3797;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:99:1402,108,0	1/1:0,12:12:33.11:428,33,0	0/0:22,0:22:53.08:0,53,781	0/0:10,0:10:30.08:0,30,424	1/1:0,28:28:81.26:1051,81,0	1/1:1,15:16:39.13:506,39,0	1/1:0,28:28:72.23:935,72,0	1/1:0,23:23:66.12:807,66,0	0/0:23,0:23:69.20:0,69,976	1/1:0,25:25:75.21:954,75,0	1/1:1,18:19:51.15:647,51,0	1/1:0,27:27:72.23:935,72,0	1/1:0,24:24:72.23:934,72,0	0/0:27,0:27:81.27:0,81,1210	1/1:0,23:23:60.20:779,60,0	1/1:0,23:23:63.20:818,63,0	0/0:32,0:32:96.31:0,96,1417	0/0:34,0:34:99:0,102,1479	1/1:0,21:21:63.20:817,63,0	1/1:0,27:27:78.21:994,78,0	1/1:0,28:28:78.25:1012,78,0	1/1:0,18:18:54.18:701,54,0	1/1:1,24:25:62.84:818,63,0	1/1:1,30:31:84.27:1090,84,0	1/1:0,22:22:57.19:740,57,0	1/1:0,22:22:66.17:814,66,0	1/1:1,36:37:99:1285,99,0	1/1:0,10:10:30.10:389,30,0
chr10	78680370	.	CATT	C	28043.30	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=14.387;DP=831;FS=6.390;HRun=0;HaplotypeScore=156.5596;InbreedingCoeff=0.9994;MQ=87.92;MQ0=0;MQRankSum=-9.754;QD=43.48;ReadPosRankSum=5.586;VQSLOD=6.2081;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,46:49:99:1730,99,0	1/1:0,10:10:23.97:407,24,0	0/0:38,0:38:99:0,108,2442	0/0:29,0:29:84.25:0,84,1915	1/1:1,24:25:44.55:774,45,0	1/1:1,20:21:42.14:739,42,0	1/1:0,28:28:78.27:1375,78,0	1/1:0,32:32:96.33:1683,96,0	0/0:33,0:33:99:0,99,2253	1/1:3,27:30:87.28:1472,87,0	1/1:1,25:26:66.23:1148,66,0	1/1:0,36:36:90.31:1587,90,0	1/1:0,32:32:87.30:1505,87,0	0/0:30,0:30:90.31:0,90,2066	1/1:1,38:39:99:1888,108,0	1/1:2,36:38:28.36:1577,28,0	0/0:29,0:29:81.28:0,81,1916	0/0:27,0:27:78.20:0,78,1688	1/1:1,27:28:81.28:1425,81,0	1/1:2,23:25:54.18:936,54,0	1/1:1,44:45:99:1891,109,0	1/1:0,30:30:71.27:1246,71,0	1/1:0,22:22:60.16:1023,60,0	1/1:2,30:32:60.19:1039,60,0	1/1:0,28:28:69.23:1168,69,0	1/1:0,29:29:87.28:1472,87,0	1/1:0,27:27:78.27:1374,78,0	1/1:0,13:13:33.11:582,33,0
chr10	78681124	.	ACGTTAGGGAGAGGCT	A	16510.03	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.370;DP=667;FS=11.728;HRun=0;HaplotypeScore=272.6236;InbreedingCoeff=0.9989;MQ=86.96;MQ0=0;MQRankSum=-16.952;QD=79.38;ReadPosRankSum=5.376;VQSLOD=2.9899;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,32:39:48.16:2132,48,0	0/0:8,0:8:24.08:0,24,1692	0/0:22,0:22:63.22:0,63,3312	0/0:31,0:31:81.24:0,81,4739	0/0:26,0:26:75.22:0,75,4699	1/1:3,11:14:30.10:1348,30,0	1/1:7,18:25:39.13:1752,39,0	0/0:31,0:31:87.28:0,87,5231	0/0:15,0:15:45.15:0,45,3266	0/0:18,0:18:51.12:0,51,3103	0/0:14,0:14:42.14:0,42,2554	1/1:2,27:29:66.23:2937,66,0	1/1:1,16:17:45.15:2022,45,0	0/0:27,0:27:78.25:0,78,5047	0/0:34,0:34:96.31:0,96,6648	0/0:31,0:31:87.18:0,87,5266	0/0:40,0:40:99:0,120,8423	0/0:26,0:26:75.26:0,75,5226	0/0:9,0:9:27.09:0,27,1443	0/0:15,0:15:45.15:0,45,3113	0/0:36,0:36:99:0,108,7231	1/1:4,24:28:51.17:2193,51,0	1/1:1,27:28:63.22:2779,63,0	1/1:8,20:28:29.70:1347,30,0	0/0:18,0:18:54.19:0,54,3376	0/0:26,0:26:75.26:0,75,5053	0/0:24,0:24:72.25:0,72,4458	0/0:8,0:8:24.08:0,24,1800
chr10	78681261	.	CT	C	19464.42	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=8.077;DP=718;FS=0.683;HRun=2;HaplotypeScore=79.7357;InbreedingCoeff=0.9936;MQ=87.54;MQ0=0;MQRankSum=-4.570;QD=35.20;ReadPosRankSum=3.127;VQSLOD=5.3756;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,49:49:99:1654,132,0	1/1:1,10:11:30.10:389,30,0	0/0:28,0:28:75.18:0,75,1070	0/0:24,0:24:63.06:0,63,881	1/1:0,26:26:78.25:1011,78,0	1/1:1,21:22:57.19:740,57,0	1/1:0,27:27:78.25:1012,78,0	1/1:0,38:38:99:1399,114,0	0/0:32,0:32:96.33:0,96,1438	1/1:0,23:23:69.21:882,69,0	1/1:0,15:15:42.14:545,42,0	1/1:0,35:35:96.27:1226,96,0	1/1:0,17:17:39.13:502,39,0	0/0:27,0:27:81.27:0,81,1213	1/1:0,33:33:90.29:1169,90,0	1/1:2,33:35:44.80:1084,45,0	0/0:39,0:39:99:0,117,1698	0/0:15,0:15:39.09:0,39,559	1/1:1,15:16:45.14:570,45,0	1/1:0,18:18:51.17:662,51,0	1/1:0,32:32:93.30:1208,93,0	1/1:0,19:19:51.17:662,51,0	1/1:0,16:16:42.14:545,42,0	1/1:0,41:41:99:1402,108,0	1/1:0,18:18:51.10:640,51,0	1/1:0,28:28:84.25:1073,84,0	1/1:1,27:28:72.23:934,72,0	1/1:0,6:6:12.04:156,12,0
chr10	78681595	.	G	GTC	694	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=0.894;DP=582;FS=0.000;HRun=0;HaplotypeScore=126.1352;InbreedingCoeff=0.2370;MQ=67.65;MQ0=14;MQRankSum=-1.439;QD=1.47;ReadPosRankSum=-0.601;VQSLOD=1.7820;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:29:9.22:63,9,0	1/1:9,0:8:5.27:28,5,0	0/1:39,0:27:0:0,0,0	0/0:56,0:22:0.19:0,0,1	1/1:15,0:15:1.93:23,2,0	0/1:27,0:27:1.08:29,0,1	1/1:28,0:26:5.65:46,6,0	1/1:31,0:29:5.26:21,5,0	0/0:13,7:20:5.84:0,6,47	1/1:18,0:18:7.82:52,8,0	1/1:17,0:17:3.01:31,3,0	1/1:14,0:13:3.42:23,3,0	1/1:18,0:17:14.40:105,14,0	0/1:16,0:16:29.03:29,0,116	1/1:22,0:22:0.94:1,1,0	0/1:17,0:17:19.93:38,0,20	0/0:23,0:21:22.77:0,23,233	0/0:11,0:9:14.81:0,15,135	1/1:21,0:19:4.09:17,4,0	1/1:9,0:9:2.99:24,3,0	1/1:19,0:18:2.80:13,3,0	0/1:19,0:18:13.02:43,0,13	1/1:15,0:13:0.47:1,0,0	0/1:19,0:17:0.01:0,0,0	1/1:20,0:20:10.53:91,11,0	1/1:23,0:22:4.54:40,5,0	0/1:18,0:17:1.46:23,0,1	1/1:6,1:7:8.97:88,9,0
chr10	78681646	.	TCTCTCC	T	624.75	PASS	AB=0.989;AC=17;AF=0.315;AN=54;BaseQRankSum=0.057;DP=426;FS=2.686;HRun=0;HaplotypeScore=130.5439;InbreedingCoeff=-0.3091;MQ=33.57;MQ0=47;MQRankSum=-4.580;QD=2.23;ReadPosRankSum=0.254;VQSLOD=2.4679;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:18:35.99:36,0,71	0/1:8,0:7:38.03:38,0,85	./.	0/0:10,0:3:1.16:0,1,71	0/0:11,0:9:3.01:0,3,51	0/1:22,0:19:37.55:38,0,49	0/0:28,0:26:29.75:0,30,201	0/1:26,0:22:2.56:3,0,194	0/0:19,0:15:25.29:0,25,587	0/1:13,3:12:77.26:77,0,202	0/0:8,0:8:8.20:0,8,190	0/1:15,0:13:3.88:4,0,88	0/1:10,0:9:23.08:51,0,23	0/0:7,0:6:12.01:0,12,175	0/1:15,0:15:14.66:40,0,15	0/1:21,0:15:90.47:90,0,142	0/0:20,0:15:15.16:0,15,329	0/1:10,0:8:61.20:70,0,61	0/1:17,0:10:12.60:13,0,295	0/0:4,0:3:0:0,0,0	0/1:20,0:14:40.33:40,0,105	0/0:17,0:14:2.67:0,3,19	0/0:8,0:6:1.25:0,1,3	0/1:23,0:20:6.77:28,0,7	0/1:12,0:10:75.24:75,0,158	0/1:27,0:23:50.17:50,0,430	1/1:16,1:16:9.75:115,10,0	0/0:5,0:4:6.02:0,6,149
chr10	78681652	.	C	CCT	593.62	PASS	AB=0.914;AC=18;AF=0.321;AN=56;BaseQRankSum=2.801;DP=415;FS=8.351;HRun=0;HaplotypeScore=122.0426;InbreedingCoeff=-0.0869;MQ=35.35;MQ0=47;MQRankSum=-3.931;QD=2.58;ReadPosRankSum=-2.200;VQSLOD=1.5814;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:21:30.02:40,0,30	0/1:6,1:6:40.97:41,0,62	0/0:12,0:2:2.98:0,3,22	0/0:20,0:8:9.90:0,10,132	0/0:9,2:8:9.03:0,9,121	0/1:22,0:19:37.56:38,0,49	0/0:27,0:25:9.28:0,9,99	0/0:19,0:16:15.73:0,16,185	0/0:18,0:15:31.29:0,31,412	0/1:14,2:12:75.77:76,0,162	0/0:8,0:8:9.03:0,9,123	0/0:11,0:11:6.80:0,7,61	0/1:9,0:8:23.53:28,0,24	0/0:7,0:6:15.05:0,15,204	1/1:8,7:15:8.79:83,9,0	0/1:18,4:17:86.73:87,0,215	0/0:18,0:14:19.37:0,19,271	0/1:9,0:7:58.06:69,0,58	0/1:15,1:10:26.04:26,0,267	0/1:3,1:3:0:0,0,0	0/1:16,1:11:40:40,0,112	1/1:15,0:11:1.64:14,2,0	0/0:8,0:6:1.21:0,1,3	0/0:21,0:18:5.90:0,6,21	0/1:7,4:8:79.32:79,0,89	0/1:25,2:23:70.75:71,0,368	1/1:13,2:14:5.63:57,6,0	0/0:4,0:3:6.02:0,6,82
chr10	78681656	.	T	TCG	718.18	PASS	AB=0.994;AC=22;AF=0.393;AN=56;BaseQRankSum=8.008;DP=410;FS=9.864;HRun=0;HaplotypeScore=132.0149;InbreedingCoeff=-0.0928;MQ=38.03;MQ0=45;MQRankSum=-6.053;QD=2.49;ReadPosRankSum=-1.829;VQSLOD=1.6548;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,3:20:19.28:182,19,0	0/1:6,0:5:36.17:36,0,81	0/0:12,0:3:8.94:0,9,89	0/0:22,0:10:14.84:0,15,207	0/0:9,0:6:9.03:0,9,138	0/1:20,2:21:4.13:198,0,4	1/1:23,2:23:17.14:153,17,0	0/0:18,0:15:28.05:0,28,306	0/0:18,0:15:33.02:0,33,475	0/1:14,0:10:18.12:18,0,200	0/0:7,0:7:9.03:0,9,137	0/1:12,0:11:25.63:35,0,26	0/1:8,0:7:19.07:50,0,19	0/0:11,0:9:21.06:0,21,290	0/1:16,0:16:31.17:37,0,31	0/1:23,0:17:26.33:26,0,273	0/0:16,0:12:24.04:0,24,324	0/1:11,0:9:16.84:17,0,111	0/1:16,0:10:2.10:2,0,347	0/0:4,0:3:3:0,3,26	0/1:16,0:11:23.84:24,0,126	1/1:13,0:9:1.15:31,1,0	1/1:8,0:6:2.87:15,3,0	0/1:22,0:19:7.31:17,0,7	0/1:14,0:10:26.27:26,0,155	0/1:24,0:20:9.82:10,0,502	0/1:15,0:15:6.85:7,0,32	0/0:4,0:3:6.02:0,6,92
chr10	78681666	.	CCT	C	216.99	PASS	AB=0.908;AC=11;AF=0.196;AN=56;BaseQRankSum=5.408;DP=384;FS=4.079;HRun=0;HaplotypeScore=126.5659;InbreedingCoeff=0.2690;MQ=46.75;MQ0=34;MQRankSum=-5.359;QD=1.89;ReadPosRankSum=-1.676;VQSLOD=2.1941;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,5:16:33.83:110,0,34	0/0:4,0:3:9.03:0,9,158	0/0:22,0:11:13.29:0,13,407	0/0:31,0:14:33.98:0,34,459	0/0:9,2:8:15.05:0,15,244	0/1:16,1:15:32.96:43,0,33	0/1:26,1:25:53.79:54,0,108	0/0:15,0:12:27.06:0,27,433	0/0:16,0:15:33.10:0,33,536	0/0:11,1:9:15.05:0,15,261	0/0:6,0:6:12.04:0,12,205	0/1:10,2:11:21.10:47,0,21	0/1:8,0:8:7.12:24,0,7	0/0:10,0:9:9.59:0,10,305	0/0:15,0:15:18.33:0,18,312	0/0:21,0:18:40.37:0,40,627	0/0:14,0:12:24.07:0,24,383	0/0:11,0:9:21.07:0,21,370	0/0:14,0:10:30.08:0,30,495	0/0:5,0:5:12.04:0,12,184	0/0:14,0:11:13.86:0,14,218	1/1:9,1:7:1.45:17,1,0	1/1:5,1:5:5.60:47,6,0	1/1:17,1:16:4.86:18,5,0	0/0:11,0:8:22.47:0,22,281	0/0:21,1:19:14.41:0,14,798	0/0:12,0:12:15.05:0,15,233	0/0:3,0:3:6.02:0,6,106
chr10	78681693	.	C	CA	1499.46	PASS	AB=0.770;AC=23;AF=0.411;AN=56;BaseQRankSum=0.876;DP=395;FS=6.285;HRun=1;HaplotypeScore=124.4869;InbreedingCoeff=0.4309;MQ=53.67;MQ0=11;MQRankSum=1.116;QD=9.67;ReadPosRankSum=6.270;VQSLOD=1.4265;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:26.60:0,27,188	1/1:3,1:4:2.97:20,3,0	0/0:40,0:22:57.91:0,58,713	0/0:48,0:25:65.94:0,66,854	1/1:7,5:12:14.80:126,15,0	0/0:14,0:14:32.72:0,33,229	0/0:27,0:25:41.26:0,41,278	0/1:4,10:13:3.32:206,0,3	0/0:11,0:10:24.55:0,25,336	0/1:5,1:6:31.62:32,0,61	0/1:6,2:8:12.53:59,0,13	0/0:18,0:13:15.33:0,15,104	0/1:7,0:6:10.91:11,0,31	0/0:7,0:7:18.06:0,18,252	1/1:8,6:13:23.18:176,23,0	1/1:14,5:17:18.47:234,18,0	0/0:10,0:10:21.07:0,21,292	0/0:12,0:11:30.08:0,30,401	0/1:3,2:5:12.02:39,0,12	1/1:5,2:6:11.76:102,12,0	1/1:6,2:8:9.30:81,9,0	0/0:10,0:7:2.96:0,3,19	0/0:10,0:9:8.92:0,9,62	0/0:13,0:13:5.66:0,6,59	0/1:8,3:9:13.90:58,0,14	1/1:14,7:21:46.64:392,47,0	0/1:7,8:15:3.78:128,0,4	1/1:4,0:3:3:26,3,0
chr10	78681694	.	C	CA	1521.51	PASS	AB=0.758;AC=23;AF=0.411;AN=56;BaseQRankSum=0.814;DP=404;FS=3.416;HRun=0;HaplotypeScore=129.0274;InbreedingCoeff=0.5319;MQ=53.26;MQ0=11;MQRankSum=0.446;QD=9.94;ReadPosRankSum=5.860;VQSLOD=3.8320;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:26.60:0,27,189	1/1:4,1:5:2.96:19,3,0	0/0:40,0:22:53.16:0,53,710	0/0:47,0:24:63.16:0,63,797	1/1:8,5:13:14.67:126,15,0	0/0:15,0:15:32.48:0,32,229	0/0:27,0:25:41.26:0,41,278	0/1:5,10:14:0.34:224,0,0	0/0:11,0:10:24.55:0,25,331	0/1:5,1:6:34.60:35,0,44	0/1:7,2:9:12.66:59,0,13	0/0:19,0:14:15.32:0,15,103	0/0:7,0:6:5.89:0,6,40	0/0:7,0:7:18.06:0,18,249	1/1:8,6:13:23.21:177,23,0	1/1:14,5:17:18.41:234,18,0	0/0:11,0:11:21.07:0,21,292	0/0:12,0:11:30.09:0,30,402	0/1:3,2:5:12.29:39,0,12	1/1:5,2:6:11.75:102,12,0	1/1:4,2:7:6.31:56,6,0	0/0:10,0:7:2.96:0,3,19	0/0:11,0:10:8.92:0,9,62	0/0:14,0:14:5.86:0,6,59	0/1:9,3:10:12.23:81,0,12	1/1:14,7:21:46:400,46,0	1/1:7,8:15:8.02:136,8,0	1/1:5,0:4:3:26,3,0
chr10	78681701	.	T	TTCTCTC	595.06	PASS	AB=0.959;AC=16;AF=0.333;AN=48;BaseQRankSum=-1.165;DP=457;FS=14.307;HRun=0;HaplotypeScore=172.9246;InbreedingCoeff=0.1550;MQ=48.64;MQ0=16;MQRankSum=-1.028;QD=3.23;ReadPosRankSum=-4.037;VQSLOD=0.8013;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:20:5.92:0,6,75	./.	./.	./.	0/0:15,0:14:7.99:0,8,119	0/0:15,0:16:5.93:0,6,73	0/0:30,0:28:2.62:0,3,39	./.	0/0:12,0:11:10.79:0,11,220	0/1:8,0:9:10.14:10,0,25	0/1:7,0:7:14.14:14,0,52	1/1:22,1:18:12.92:284,13,0	1/1:12,7:18:10.36:124,10,0	0/0:8,0:8:12.04:0,12,231	0/0:14,0:13:10.84:0,11,144	0/1:21,0:20:4.61:5,0,179	0/1:16,0:16:28.41:28,0,301	0/1:13,0:12:40.43:93,0,40	0/0:6,0:5:2.94:0,3,18	0/1:9,0:8:6.76:7,0,73	1/1:10,0:10:3:37,3,0	1/1:18,0:15:7.64:130,8,0	0/1:18,0:16:0.08:1,0,0	0/0:24,0:22:1.11:0,1,3	0/0:10,0:9:6.37:0,6,111	0/0:19,0:20:25.90:0,26,363	0/1:14,0:18:2.07:2,0,72	0/0:2,0:4:3.01:0,3,41
chr10	78681947	.	GCTGTGGTGGCC	G	9133.39	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.838;DP=548;FS=17.052;HRun=0;HaplotypeScore=180.8512;InbreedingCoeff=0.9980;MQ=85.74;MQ0=0;MQRankSum=-12.690;QD=77.40;ReadPosRankSum=1.574;VQSLOD=3.7087;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,12:18:39.13:1323,39,0	0/0:10,0:10:27.09:0,27,1557	0/0:22,0:22:57.20:0,57,2790	0/0:20,0:20:54.19:0,54,2781	0/0:15,0:15:42.14:0,42,2368	1/1:3,15:18:45.14:1517,45,0	1/1:8,7:15:27.09:926,27,0	0/0:31,0:31:90.31:0,90,4531	0/0:25,0:25:72.25:0,72,4032	0/0:12,0:12:36.12:0,36,1799	0/0:15,0:15:45.14:0,45,2414	1/1:5,11:16:39.12:1276,39,0	1/1:4,14:18:45.15:1571,45,0	0/0:23,0:23:66.20:0,66,3653	0/0:26,0:26:78.27:0,78,4266	0/0:19,0:19:57.20:0,57,3289	0/0:28,0:28:84.29:0,84,4448	0/0:13,0:13:36.10:0,36,1838	0/0:22,0:22:57.18:0,57,2897	0/0:19,0:19:54.16:0,54,2689	0/0:30,0:30:87.28:0,87,4512	1/1:3,9:12:30.10:1017,30,0	1/1:1,7:8:18.06:636,18,0	1/1:2,11:13:27.52:866,28,0	0/0:24,0:24:66.23:0,66,3675	0/0:30,0:30:87.30:0,87,4782	0/0:33,0:33:96.33:0,96,5293	0/0:13,0:13:39.13:0,39,2250
chr10	78682026	.	CT	C	5802.17	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.284;DP=611;FS=0.000;HRun=1;HaplotypeScore=70.8968;InbreedingCoeff=0.9998;MQ=87.55;MQ0=0;MQRankSum=-4.798;QD=36.49;ReadPosRankSum=3.731;VQSLOD=5.2677;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:66.08:853,66,0	0/0:11,0:11:30.09:0,30,456	0/0:29,0:29:87.22:0,87,1259	0/0:19,0:19:48.15:0,48,712	0/0:15,0:15:45.14:0,45,694	1/1:0,20:20:48.12:649,48,0	1/1:0,16:16:48.12:649,48,0	0/0:39,0:39:99:0,117,1809	0/0:25,0:25:72.24:0,72,1150	0/0:22,0:22:66.22:0,66,1050	0/0:24,0:24:60.19:0,60,932	1/1:0,20:20:57.15:774,57,0	1/1:0,22:22:66.18:900,66,0	0/0:19,0:19:57.19:0,57,908	0/0:24,0:24:72.11:0,72,1070	0/0:16,0:16:48.14:0,48,721	0/0:25,0:25:75.23:0,75,1173	0/0:20,0:20:60.20:0,60,956	0/0:23,0:23:69.18:0,69,992	0/0:25,0:24:60.18:0,60,929	0/0:15,0:15:45.15:0,45,719	1/1:0,22:20:51.17:712,51,0	1/1:0,14:14:36.12:493,36,0	1/1:0,21:21:60.07:772,60,0	0/0:28,0:26:72.23:0,72,1124	0/0:23,1:24:30.27:0,30,1035	0/0:32,0:32:96.33:0,96,1534	0/0:17,0:17:51.17:0,51,798
chr10	78682400	.	T	TG	9799	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.792;DP=751;FS=2.478;HRun=1;HaplotypeScore=88.3181;InbreedingCoeff=0.9999;MQ=89.35;MQ0=0;MQRankSum=-10.476;QD=40.33;ReadPosRankSum=4.090;VQSLOD=5.3441;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,50:52:99:2112,141,0	0/0:13,0:13:39.13:0,39,506	0/0:33,0:33:93.24:0,93,1123	0/0:24,0:24:63.15:0,63,761	0/0:25,0:25:69.20:0,69,868	1/1:0,26:26:69.17:1006,69,0	1/1:1,26:27:69.23:1034,69,0	0/0:42,0:42:99:0,120,1503	0/0:31,0:31:93.24:0,93,1159	0/0:25,0:25:72.20:0,72,886	0/0:23,0:23:69.19:0,69,857	1/1:1,28:29:81.22:1187,81,0	1/1:1,27:28:78.26:1168,78,0	0/0:25,0:25:75.23:0,75,959	0/0:41,0:41:99:0,123,1553	0/0:29,0:29:84.25:0,84,1064	0/0:24,0:24:69.22:0,69,896	0/0:25,0:25:69.20:0,69,880	0/0:23,0:23:69.20:0,69,870	0/0:17,0:17:51.15:0,51,637	0/0:24,0:24:69.21:0,69,880	1/1:1,24:25:69.17:1003,69,0	1/1:0,24:24:66.22:986,66,0	1/1:1,31:32:87.29:1303,87,0	0/0:25,0:25:75.22:0,75,946	0/0:30,0:30:84.27:0,84,1080	0/0:19,0:19:57.18:0,57,728	0/0:10,0:10:30.10:0,30,385
chr10	78682825	.	A	AT	16690.65	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=14.951;DP=633;FS=0.705;HRun=0;HaplotypeScore=92.8423;InbreedingCoeff=0.9958;MQ=91.47;MQ0=0;MQRankSum=-6.149;QD=35.14;ReadPosRankSum=2.938;VQSLOD=4.4418;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:87.29:1170,87,0	1/1:0,7:7:21.06:277,21,0	0/0:25,0:24:61.08:0,61,912	0/0:25,0:25:62.11:0,62,841	1/1:1,14:15:42.07:544,42,0	1/1:0,17:17:48.14:606,48,0	1/1:1,33:34:86.30:1181,86,0	1/1:0,26:26:75.22:1007,75,0	0/0:29,0:29:87.25:0,87,1163	1/1:0,20:20:57.16:725,57,0	1/1:2,12:15:38.66:499,39,0	1/1:0,16:16:45.15:604,45,0	1/1:0,22:22:57.18:760,57,0	0/0:28,0:28:81.27:0,81,1119	1/1:0,30:30:81.27:1113,81,0	1/1:1,37:38:96.32:1302,96,0	0/0:30,0:30:90.26:0,90,1205	0/0:21,0:21:63.12:0,63,806	1/1:0,16:16:48.05:605,48,0	1/1:0,18:19:52.71:668,53,0	1/1:3,36:39:97.92:1389,98,0	1/1:1,11:12:30.08:390,30,0	1/1:1,15:16:39.13:525,39,0	1/1:1,31:32:79.81:1057,80,0	1/1:0,14:14:38.98:483,39,0	1/1:1,19:20:43.88:657,44,0	1/1:2,26:28:69.20:925,69,0	1/1:0,5:5:15.05:202,15,0
chr10	78683610	.	A	AAG	8896.79	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-15.911;DP=763;FS=14.963;HRun=0;HaplotypeScore=88.1904;InbreedingCoeff=0.9984;MQ=90.07;MQ0=0;MQRankSum=-5.860;QD=38.02;ReadPosRankSum=1.605;VQSLOD=6.1421;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,49:56:99:2006,117,0	0/0:7,0:7:18.06:0,18,236	0/0:25,0:25:34.20:0,34,606	0/0:41,0:41:70.91:0,71,868	0/0:26,0:26:69.21:0,69,890	1/1:1,16:17:48.16:823,48,0	1/1:3,28:31:72.25:1234,72,0	0/0:26,0:25:66.16:0,66,834	0/0:22,0:22:60.17:0,60,772	0/0:23,0:23:57.17:0,57,725	0/0:25,0:25:69.22:0,69,903	1/1:7,18:26:45.15:771,45,0	1/1:1,30:31:78:1298,78,0	0/0:29,0:29:87.27:0,87,1117	0/0:39,0:39:93.28:0,93,1204	0/0:34,0:34:90.24:0,90,1148	0/0:39,0:39:99:0,105,1307	0/0:24,0:24:63.17:0,63,796	0/0:18,0:18:33.06:0,33,401	0/0:32,0:32:78.24:0,78,1010	0/0:28,0:28:72.17:0,72,924	1/1:3,20:23:51.17:874,51,0	1/1:5,16:21:45.15:759,45,0	1/1:1,27:29:66.23:1132,66,0	0/0:23,0:23:60.11:0,60,765	0/0:30,0:30:81.23:0,81,1024	0/0:27,0:26:72.23:0,72,943	0/0:11,0:11:27.09:0,27,355
chr10	78683984	.	C	CA	7752.96	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-11.351;DP=715;FS=5.661;HRun=6;HaplotypeScore=78.2920;InbreedingCoeff=0.9996;MQ=68.42;MQ0=0;MQRankSum=-1.612;QD=31.91;ReadPosRankSum=2.809;VQSLOD=5.3201;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,43:44:99:1547,123,0	0/0:9,0:9:24.05:0,24,245	0/0:20,0:19:53.22:0,53,515	0/0:18,0:16:39.09:0,39,398	0/0:26,0:26:75.15:0,75,757	1/1:3,24:26:69.21:857,69,0	1/1:3,19:22:57.18:717,57,0	0/0:23,0:23:54.12:0,54,551	0/0:25,0:25:66.15:0,66,673	0/0:20,0:20:51.10:0,51,516	0/0:20,0:20:54.12:0,54,551	1/1:2,31:33:81.26:1019,81,0	1/1:4,28:32:75.24:938,75,0	0/0:16,0:16:48.11:0,48,490	0/0:30,0:30:81.18:0,81,826	0/0:35,0:35:99:0,102,1021	0/0:24,0:24:63.07:0,63,630	0/0:35,0:34:99:0,99,1009	0/0:25,0:25:66.14:0,66,673	0/0:21,0:21:60.10:0,60,598	0/0:15,0:15:39.06:0,39,390	1/1:3,23:26:57.18:717,57,0	1/1:1,29:30:87.28:1089,87,0	1/1:2,27:29:69.22:868,69,0	0/0:30,0:30:87.20:0,87,888	0/0:36,0:36:99:0,108,1097	0/0:31,0:31:87.18:0,87,881	0/0:13,0:13:36.08:0,36,367
chr10	78685537	.	AACACACACACACACACACACAC	A	4243.28	PASS	AB=0.856;AC=24;AF=0.444;AN=54;BaseQRankSum=7.759;DP=471;FS=23.629;HRun=0;HaplotypeScore=236.7992;InbreedingCoeff=0.6325;MQ=57.27;MQ0=14;MQRankSum=-1.656;QD=20.60;ReadPosRankSum=-1.336;VQSLOD=2.2911;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:27.09:0,27,1299	1/1:6,0:6:3.01:51,3,0	0/0:13,0:10:6.02:0,6,115	0/0:19,0:12:3.90:0,4,100	1/1:10,7:18:8.94:213,9,0	0/0:14,0:21:21.07:0,21,1078	0/0:17,0:17:9.03:0,9,417	1/1:16,4:20:9.19:156,9,0	0/0:20,0:19:33.11:0,33,2605	1/1:16,6:20:13.70:467,14,0	1/1:4,6:10:12.04:693,12,0	0/0:11,0:13:21.04:0,21,883	0/0:13,0:15:14.01:0,14,673	0/0:12,0:12:15.05:0,15,1301	1/1:7,8:15:6.02:346,6,0	1/1:8,3:11:6.28:188,6,0	0/0:33,0:33:59.42:0,59,4822	0/0:9,0:9:12.04:0,12,415	1/1:14,0:13:0.47:1,0,0	1/1:11,6:17:15.05:866,15,0	./.	0/0:12,0:11:6.02:0,6,158	0/0:9,0:9:3.01:0,3,40	0/0:23,0:24:30.10:0,30,1891	1/1:6,9:15:9.03:520,9,0	0/1:22,0:26:99:120,0,211	1/1:15,5:21:11.56:517,12,0	0/1:9,0:11:32.92:107,0,33
chr10	78685886	.	C	CTGGTTCA	19362.05	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-10.488;DP=750;FS=3.261;HRun=0;HaplotypeScore=155.1866;InbreedingCoeff=0.9999;MQ=88.79;MQ0=0;MQRankSum=-18.817;QD=89.23;ReadPosRankSum=1.457;VQSLOD=5.8463;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,26:39:84.29:3333,84,0	0/0:13,0:13:39.10:0,39,885	0/0:30,0:30:80.92:0,81,1787	0/0:33,0:33:93.25:0,93,2158	0/0:39,0:39:99:0,111,2850	1/1:4,25:32:84.29:3331,84,0	1/1:6,14:29:60.21:2245,60,0	0/0:34,0:34:99:0,102,2462	0/0:30,0:30:90.30:0,90,2358	0/0:30,0:30:90.31:0,90,2385	0/0:18,0:18:51.16:0,51,1313	1/1:3,24:31:81.28:3252,81,0	1/1:4,20:29:69.24:2741,69,0	0/0:13,0:13:39.13:0,39,1039	0/0:36,0:36:99:0,108,2879	0/0:23,0:23:69.22:0,69,1750	0/0:29,0:29:87.30:0,87,2263	0/0:24,0:24:66.17:0,66,1620	0/0:31,0:31:93.24:0,93,2239	0/0:28,0:28:84.29:0,84,2202	0/0:33,0:33:99:0,99,2595	1/1:0,14:22:42.14:1711,42,0	1/1:3,14:21:45.58:1772,46,0	1/1:0,13:14:29.89:978,30,0	0/0:16,0:16:48.13:0,48,1210	0/0:30,0:30:90.28:0,90,2277	0/0:31,0:30:90.28:0,90,2284	0/0:12,0:12:36.12:0,36,970
chr10	78686518	.	G	GACCTCAC	19968.10	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-5.028;DP=739;FS=3.178;HRun=0;HaplotypeScore=171.5969;InbreedingCoeff=0.9984;MQ=87.94;MQ0=0;MQRankSum=-19.188;QD=83.90;ReadPosRankSum=1.230;VQSLOD=5.6746;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,22:39:81.28:3086,81,0	0/0:9,0:9:27.08:0,27,641	0/0:35,0:35:82.34:0,82,2379	0/0:26,0:26:49.96:0,50,1484	0/0:20,0:20:60.21:0,60,1512	1/1:10,19:29:72.25:2723,72,0	1/1:9,15:27:51.18:1920,51,0	0/0:27,0:27:72.24:0,72,1767	0/0:24,0:24:69.22:0,69,1711	0/0:31,0:31:90.31:0,90,2308	0/0:23,0:23:69.24:0,69,1769	1/1:13,19:34:81.28:3133,81,0	1/1:7,20:28:81.28:3087,81,0	0/0:29,0:29:84.27:0,84,2100	0/0:27,0:27:81.28:0,81,2039	0/0:42,0:42:99:0,120,2932	0/0:30,0:30:87.28:0,87,2178	0/0:14,0:14:36.12:0,36,922	0/0:21,0:21:60.20:0,60,1441	0/0:26,0:26:75.26:0,75,1915	0/0:42,0:42:99:0,126,3039	1/1:11,21:33:63.22:2440,63,0	1/1:4,22:26:63.22:2447,63,0	1/1:4,14:22:30.10:1132,30,0	0/0:17,0:17:48.16:0,48,1197	0/0:27,0:27:81.28:0,81,2078	0/0:25,0:25:63.22:0,63,1609	0/0:6,0:6:18.06:0,18,461
chr10	78686778	.	AG	A	14599.64	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=10.841;DP=723;FS=9.683;HRun=7;HaplotypeScore=104.6079;InbreedingCoeff=0.9989;MQ=88.80;MQ0=0;MQRankSum=-6.491;QD=26.40;ReadPosRankSum=1.153;VQSLOD=4.4155;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,53:53:99:1468,144,0	1/1:0,9:9:24.05:245,24,0	0/0:28,0:28:49.85:0,50,757	0/0:27,0:27:62.67:0,63,727	1/1:1,25:26:69.15:703,69,0	1/1:1,18:19:48.11:489,48,0	1/1:5,20:25:64.07:636,64,0	1/1:5,27:32:78.15:783,78,0	0/0:21,0:21:60.18:0,60,740	1/1:2,21:23:63.11:628,63,0	1/1:1,14:15:36.04:356,36,0	1/1:3,29:32:87.20:887,87,0	1/1:4,15:19:39.09:397,39,0	0/0:27,0:27:75.24:0,75,943	1/1:2,21:23:57.13:582,57,0	1/1:0,36:36:99:1041,102,0	0/0:39,0:39:96.28:0,96,1181	0/0:28,0:28:81.20:0,81,987	1/1:1,19:20:57.09:567,57,0	1/1:2,28:30:75.09:745,75,0	1/1:4,26:30:66.15:673,66,0	1/1:3,26:29:75.17:763,75,0	1/1:2,26:28:69.16:703,69,0	1/1:1,27:28:75.17:762,75,0	1/1:0,9:9:27.06:275,27,0	1/1:4,30:34:90.20:918,90,0	1/1:0,25:25:72.16:735,72,0	1/1:1,7:8:24.05:244,24,0
chr10	78687612	.	G	GT	3827.88	PASS	AB=0.879;AC=17;AF=0.304;AN=56;BaseQRankSum=-10.191;DP=568;FS=3.315;HRun=10;HaplotypeScore=61.6327;InbreedingCoeff=0.8898;MQ=75.54;MQ0=0;MQRankSum=-0.313;QD=21.38;ReadPosRankSum=3.083;VQSLOD=4.7603;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:51.13:544,51,0	0/0:10,0:10:23.96:0,24,197	0/0:18,0:18:23.76:0,24,204	0/0:18,0:15:14.48:0,14,99	0/0:27,0:27:74.91:0,75,616	1/1:2,28:30:78.20:831,78,0	1/1:1,18:19:48.12:512,48,0	0/1:25,4:28:27.06:27,0,422	0/0:19,0:19:44.94:0,45,369	0/0:33,0:33:80.87:0,81,665	0/0:22,0:23:58.96:0,59,474	1/1:3,7:10:18.05:192,18,0	1/1:1,13:14:33.08:352,33,0	0/0:11,0:11:26.95:0,27,221	0/0:15,0:15:44.95:0,45,369	0/0:16,0:16:44.93:0,45,366	0/0:23,0:23:38.08:0,38,420	0/0:18,1:19:18.52:0,19,340	0/0:24,0:25:63.51:0,64,502	0/0:29,0:29:71.88:0,72,588	0/0:14,0:15:40.99:0,41,326	1/1:3,18:21:29.34:500,29,0	1/1:0,20:20:57.14:607,57,0	1/1:2,10:12:5.43:263,5,0	0/0:20,0:20:59.91:0,60,489	0/0:26,0:28:66.98:0,67,529	0/0:19,0:19:56.94:0,57,468	0/0:20,0:20:50.94:0,51,419
chr10	78688184	.	T	TC	7674.70	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-14.039;DP=491;FS=19.776;HRun=4;HaplotypeScore=88.3033;InbreedingCoeff=0.9981;MQ=80.10;MQ0=1;MQRankSum=1.457;QD=35.21;ReadPosRankSum=2.146;VQSLOD=3.0280;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:63.18:0,63,713	1/1:0,7:7:21.07:287,21,0	0/0:28,0:26:53.17:0,53,573	0/0:39,0:34:69.31:0,69,704	1/1:0,11:11:30.06:383,30,0	0/0:9,0:9:24.07:0,24,272	0/0:22,0:22:56.73:0,57,608	1/1:0,20:20:57.15:757,57,0	0/0:10,0:10:30.05:0,30,319	1/1:3,11:14:33.11:451,33,0	1/1:0,8:8:21.07:287,21,0	0/0:24,0:24:60.14:0,60,659	0/0:18,0:18:54.15:0,54,612	0/0:13,0:13:33.09:0,33,374	1/1:3,9:12:30.09:395,30,0	1/1:0,15:15:45.15:610,45,0	0/0:22,0:22:60.15:0,60,664	0/0:12,0:12:30.08:0,30,334	1/1:3,13:16:42.10:537,42,0	1/1:4,27:31:75.04:1025,75,0	1/1:2,28:30:74.46:991,74,0	0/0:15,0:15:42.12:0,42,476	0/0:14,0:14:39.10:0,39,432	0/0:20,0:20:42.04:0,42,462	1/1:0,15:15:38.73:531,39,0	1/1:0,11:11:33.10:436,33,0	1/1:0,10:10:30.10:410,30,0	1/1:2,16:18:42.14:574,42,0
chr10	78688588	.	C	CA	8413.62	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=19.319;DP=723;FS=3.964;HRun=1;HaplotypeScore=107.3340;InbreedingCoeff=0.9998;MQ=83.57;MQ0=0;MQRankSum=-4.163;QD=37.56;ReadPosRankSum=3.238;VQSLOD=4.9849;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,36:39:99:1459,104,0	0/0:9,0:9:27.09:0,27,351	0/0:35,0:35:88.62:0,89,1098	0/0:27,0:27:67.73:0,68,857	0/0:25,0:25:75.23:0,75,959	1/1:2,13:15:35.01:509,35,0	1/1:1,19:20:54.18:743,54,0	0/0:20,0:20:51.16:0,51,651	0/0:29,0:29:81.26:0,81,1052	0/0:21,0:21:63.20:0,63,818	0/0:25,0:25:72.23:0,72,935	1/1:0,34:34:95.21:1349,95,0	1/1:0,31:31:90.30:1258,90,0	0/0:30,0:30:87.28:0,87,1128	0/0:30,0:30:84.27:0,84,1090	0/0:27,0:27:75.24:0,75,974	0/0:33,0:33:96.31:0,96,1247	0/0:31,0:31:90.29:0,90,1168	0/0:23,0:23:68.59:0,69,865	0/0:26,0:26:78.25:0,78,1013	0/0:30,0:30:90.29:0,90,1168	1/1:1,33:34:96.28:1334,96,0	1/1:1,25:26:62.95:887,63,0	1/1:1,24:25:64.46:874,64,0	0/0:14,0:14:42.12:0,42,529	0/0:26,0:26:75.24:0,75,974	0/0:20,0:20:60.20:0,60,779	0/0:18,0:18:54.18:0,54,700
chr10	78690943	.	A	AT	7283.41	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=6.990;DP=475;FS=6.646;HRun=9;HaplotypeScore=74.5718;InbreedingCoeff=0.9491;MQ=75.28;MQ0=0;MQRankSum=-2.137;QD=26.11;ReadPosRankSum=1.222;VQSLOD=5.4256;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:22:57.15:631,57,0	1/1:1,8:10:0.85:221,1,0	0/0:11,0:11:11.53:0,12,77	0/0:13,0:13:20.97:0,21,178	1/1:0,17:17:48.09:516,48,0	0/0:25,0:25:59.97:0,60,521	0/0:15,0:15:38.99:0,39,339	1/1:11,16:27:27.89:500,28,0	1/1:4,15:19:25.66:474,26,0	1/1:2,16:18:42.11:465,42,0	1/1:2,18:20:31.10:571,31,0	0/0:11,0:11:14.98:0,15,130	0/0:16,0:16:44.98:0,45,390	0/0:16,0:16:41.97:0,42,364	1/1:4,9:13:27.07:299,27,0	1/1:0,15:15:45.12:498,45,0	0/0:17,0:17:47.99:0,48,416	0/0:2,0:20:36.67:0,37,108	1/1:8,19:27:57.10:605,57,0	1/1:0,4:4:12.03:133,12,0	1/1:0,10:10:30.08:332,30,0	0/0:17,0:17:19.07:0,19,339	0/0:19,1:20:11.79:0,12,331	0/0:15,0:15:38.98:0,39,339	1/1:1,16:18:41.94:439,42,0	1/1:3,24:27:26.07:723,26,0	1/1:3,17:20:45.12:498,45,0	1/1:0,11:12:35.93:379,36,0
chr10	78691777	.	G	GT	10926.63	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=14.872;DP=702;FS=0.000;HRun=8;HaplotypeScore=107.2586;InbreedingCoeff=0.9976;MQ=83.73;MQ0=0;MQRankSum=-1.442;QD=25.00;ReadPosRankSum=-1.305;VQSLOD=3.9172;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:23:35.69:199,36,0	1/1:3,12:16:29.63:370,30,0	0/0:23,0:23:23.38:0,23,351	0/0:18,0:18:31.26:0,31,296	1/1:4,34:38:99:1094,99,0	0/0:24,0:24:57.03:0,57,522	0/0:28,0:28:68.99:0,69,622	1/1:11,42:53:99:1368,119,0	1/1:2,12:14:42.08:470,42,0	1/1:5,19:25:52.37:602,52,0	1/1:4,20:24:60.13:674,60,0	0/0:18,0:18:45.01:0,45,408	0/0:22,0:22:57:0,57,515	0/0:30,0:30:84.04:0,84,769	1/1:5,38:43:98.67:1196,99,0	1/1:5,17:22:33.41:417,33,0	0/0:24,0:24:69.04:0,69,631	0/0:15,0:15:44.95:0,45,397	1/1:3,15:18:45.53:481,46,0	1/1:6,23:29:66.11:729,66,0	1/1:4,18:22:42.12:482,42,0	0/0:18,1:19:16.46:0,16,405	0/0:15,0:15:45.01:0,45,407	0/0:28,0:29:86.04:0,86,763	1/1:0,21:21:48.14:551,48,0	1/1:6,27:33:75.47:827,75,0	1/1:3,38:42:99:1191,103,0	1/1:0,14:14:24.07:275,24,0
chr10	78691988	.	TC	T	5202.81	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.192;DP=629;FS=0.364;HRun=1;HaplotypeScore=62.4534;InbreedingCoeff=0.9961;MQ=83.25;MQ0=0;MQRankSum=-0.549;QD=38.54;ReadPosRankSum=2.610;VQSLOD=5.4163;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.15:0,51,790	0/0:11,0:11:33.10:0,33,505	0/0:25,0:25:72.02:0,72,1033	0/0:11,0:11:13.76:0,14,362	0/0:43,0:43:99:0,129,2038	1/1:0,31:31:87.29:1217,87,0	1/1:0,19:19:45.15:629,45,0	0/0:35,0:35:99:0,105,1606	0/0:23,0:23:69.21:0,69,1057	0/0:31,0:31:93.31:0,93,1465	0/0:31,0:31:90.29:0,90,1416	1/1:0,19:19:54.18:755,54,0	1/1:0,17:17:51.17:713,51,0	0/0:18,0:18:54.17:0,54,839	0/0:27,0:27:81.28:0,81,1295	0/0:18,0:18:54.18:0,54,863	0/0:22,0:22:66.21:0,66,1032	0/0:23,0:23:66.22:0,66,1051	0/0:15,0:15:45.10:0,45,629	0/0:27,0:27:75.26:0,75,1197	0/0:26,0:26:78.27:0,78,1245	1/1:0,19:19:54.18:755,54,0	1/1:0,16:16:45.15:629,45,0	1/1:0,14:14:36.12:503,36,0	0/0:16,0:16:48.14:0,48,723	0/0:23,0:23:69.24:0,69,1103	0/0:38,0:38:99:0,114,1822	0/0:14,0:14:42.14:0,42,671
chr10	78692754	.	C	CAGAT	855.80	PASS	AB=0.987;AC=12;AF=0.250;AN=48;BaseQRankSum=-4.550;DP=651;FS=5.827;HRun=0;HaplotypeScore=145.6108;InbreedingCoeff=0.3962;MQ=67.25;MQ0=11;MQRankSum=3.288;QD=4.78;ReadPosRankSum=1.911;VQSLOD=1.8905;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:20,0:20:26.82:0,27,225	./.	./.	0/1:29,0:29:99:135,0,164	0/0:11,0:15:12.01:0,12,112	0/0:17,0:18:6.01:0,6,71	./.	0/0:13,0:23:27.02:0,27,247	0/0:17,0:17:8.21:0,8,82	0/0:19,0:19:9.02:0,9,102	1/1:15,3:19:9.03:206,9,0	0/0:29,0:31:36.08:0,36,462	0/1:17,1:18:47.65:48,0,247	0/0:24,0:24:15.04:0,15,166	0/1:23,0:23:3.94:4,0,22	1/1:22,0:23:8.01:52,8,0	1/1:10,6:16:18.06:412,18,0	0/0:32,0:30:3:0,3,28	0/0:31,0:30:24.01:0,24,223	0/0:25,0:25:14.72:0,15,139	1/1:19,5:25:5.87:137,6,0	0/0:35,0:35:21.04:0,21,272	0/0:28,0:31:24:0,24,290	0/0:25,0:25:11.80:0,12,181	0/0:20,0:20:4.81:0,5,112	0/1:26,0:26:9.74:10,0,66	0/0:10,0:10:3.01:0,3,39
chr10	78692813	.	ATAGATAGG	A	3423.06	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=4.820;DP=583;FS=0.374;HRun=0;HaplotypeScore=208.1548;InbreedingCoeff=-0.0122;MQ=61.95;MQ0=19;MQRankSum=0.357;QD=9.38;ReadPosRankSum=-1.168;VQSLOD=2.1494;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:0:0,0,0	1/1:6,14:20:30.78:799,31,0	0/0:29,0:17:9.94:0,10,269	0/0:15,0:12:23.18:0,23,246	0/1:30,0:29:65.36:65,0,806	0/1:17,0:17:2.94:3,0,432	0/0:17,0:17:44.77:0,45,493	1/1:38,0:27:77.73:651,78,0	0/1:19,0:19:99:471,0,126	0/1:21,0:20:28.83:284,0,29	0/1:19,0:18:50.79:101,0,51	0/0:18,0:18:48.01:0,48,779	0/0:25,0:25:75.11:0,75,2050	0/0:24,0:24:59.44:0,59,1261	0/1:24,0:24:67.49:67,0,440	0/1:25,0:25:99:144,0,122	0/0:11,0:11:31.58:0,32,415	0/0:16,0:16:47.98:0,48,959	1/1:15,0:13:26.16:276,26,0	0/1:25,0:25:89.09:89,0,106	0/1:24,0:24:5.50:5,0,74	0/0:23,0:23:55.05:0,55,826	0/0:18,0:18:51.09:0,51,1331	0/0:22,0:22:59.52:0,60,1262	0/1:23,0:23:60.66:61,0,145	0/1:24,0:24:99:275,0,132	0/1:23,0:23:77.04:77,0,100	0/1:6,0:6:53.93:54,0,275
chr10	78692817	.	ATAGG	A	5766.82	PASS	AB=0.981;AC=28;AF=0.500;AN=56;BaseQRankSum=7.604;DP=574;FS=0.355;HRun=0;HaplotypeScore=165.0614;InbreedingCoeff=0.6070;MQ=62.00;MQ0=15;MQRankSum=-2.718;QD=16.81;ReadPosRankSum=-2.262;VQSLOD=3.8176;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:0.01:0,0,0	1/1:15,5:20:42.29:508,42,0	0/0:36,0:19:15.93:0,16,317	0/0:17,0:13:23.18:0,23,246	0/1:29,1:29:70.42:70,0,292	0/1:15,0:15:43.45:43,0,180	0/0:19,0:19:32.74:0,33,438	1/1:36,0:30:86.75:736,87,0	0/1:19,0:19:67.80:68,0,129	1/1:14,5:19:56.83:595,57,0	1/1:12,6:17:24.95:302,25,0	0/0:16,0:16:42.01:0,42,500	0/0:27,0:27:27.92:0,28,1298	0/0:25,0:25:62.44:0,62,929	0/1:21,2:23:99:127,0,171	1/1:18,3:21:8.88:300,9,0	0/0:11,0:11:31.54:0,32,295	0/0:18,0:18:53.98:0,54,698	1/1:1,12:12:35.93:331,36,0	1/1:2,21:23:41.94:606,42,0	1/1:1,21:22:18.04:322,18,0	0/0:21,0:21:46.23:0,46,487	0/0:18,0:18:51.04:0,51,830	0/0:23,0:23:40.51:0,41,837	1/1:12,10:22:39.08:633,39,0	1/1:6,17:23:65.74:725,66,0	1/1:19,2:21:26.27:347,26,0	0/1:6,0:6:53.93:54,0,118
chr10	78692830	.	A	ATT	8487.55	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=7.442;DP=599;FS=0.405;HRun=2;HaplotypeScore=153.8604;InbreedingCoeff=0.7166;MQ=59.62;MQ0=11;MQRankSum=1.215;QD=17.54;ReadPosRankSum=-2.411;VQSLOD=1.5191;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:32.85:204,33,0	1/1:15,4:19:45.62:483,46,0	0/0:38,0:18:41.13:0,41,420	0/0:24,0:17:45.03:0,45,433	1/1:3,22:25:60.70:508,61,0	1/1:15,0:14:36.03:243,36,0	1/1:22,0:22:56.71:395,57,0	1/1:26,0:25:66.02:602,66,0	0/1:21,0:21:32.51:33,0,127	1/1:9,15:27:57.43:636,57,0	1/1:4,17:22:44.87:558,45,0	1/1:16,0:16:9.53:211,10,0	1/1:31,0:31:66.53:624,67,0	0/0:23,0:23:59.92:0,60,541	1/1:3,18:23:18.53:292,19,0	1/1:6,25:32:23.54:675,24,0	0/0:12,0:11:24.44:0,24,271	0/0:18,0:18:47.78:0,48,499	1/1:12,1:11:22.88:239,23,0	1/1:17,4:21:56.72:554,57,0	1/1:26,1:26:20.96:226,21,0	0/1:19,0:19:2.84:183,0,3	1/1:18,0:18:31.51:337,32,0	0/1:19,0:19:12.95:206,0,13	1/1:8,15:23:23.75:392,24,0	1/1:21,0:22:60.58:447,61,0	1/1:2,17:20:14.12:302,14,0	1/1:7,0:7:20.26:138,20,0
chr10	78693192	.	CT	C	450.53	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.389;DP=658;FS=0.000;HRun=2;HaplotypeScore=69.2471;InbreedingCoeff=0.9907;MQ=90.96;MQ0=1;MQRankSum=-0.822;QD=28.16;ReadPosRankSum=0.353;VQSLOD=3.1218;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,1891	0/0:7,0:7:18.06:0,18,270	0/0:31,0:29:57.02:0,57,1039	0/0:36,0:34:82.61:0,83,1176	0/0:19,0:19:51.13:0,51,732	0/0:22,0:22:63.20:0,63,924	0/0:33,0:33:99:0,99,1445	0/0:36,0:36:99:0,102,1450	1/1:0,16:16:42.14:545,42,0	0/0:15,0:15:45.15:0,45,670	0/0:26,0:26:78.21:0,78,1124	0/0:11,0:11:33.11:0,33,495	0/0:25,0:25:75.21:0,75,1081	0/0:21,0:21:63.21:0,63,944	0/0:22,0:22:66.22:0,66,989	0/0:22,0:22:66.22:0,66,984	0/0:33,0:33:93.32:0,93,1394	0/0:9,0:9:27.09:0,27,405	0/0:23,0:23:69.23:0,69,1029	0/0:21,0:21:63.20:0,63,925	0/0:31,0:31:90.27:0,90,1304	0/0:22,0:22:66.21:0,66,969	0/0:23,0:23:66.21:0,66,970	0/0:19,0:19:57.19:0,57,848	0/0:20,0:20:57.19:0,57,854	0/0:34,0:34:99:0,99,1460	0/0:25,0:25:75.25:0,75,1122	0/0:13,0:13:36.12:0,36,530
chr10	78693485	.	CAGTGTACTCATAAATA	C	10037.26	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=9.355;DP=332;FS=21.472;HRun=0;HaplotypeScore=143.6463;InbreedingCoeff=0.9476;MQ=62.70;MQ0=7;MQRankSum=-10.239;QD=77.81;ReadPosRankSum=1.768;VQSLOD=3.3076;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,3:8:12.04:507,12,0	1/1:4,4:8:18.06:764,18,0	0/0:16,0:7:20.10:0,20,475	0/0:30,0:13:26.43:0,26,1022	1/1:1,5:6:15.05:706,15,0	0/0:18,0:18:48.16:0,48,2772	0/0:15,0:15:42.14:0,42,2685	1/1:12,10:22:30.07:1104,30,0	0/0:9,0:9:24.08:0,24,1533	1/1:4,2:6:12.03:365,12,0	1/1:2,6:8:15.05:708,15,0	0/0:8,0:8:24.08:0,24,1708	0/0:10,0:10:21.04:0,21,1304	0/0:14,0:14:42.13:0,42,2553	1/1:6,5:11:15.05:708,15,0	1/1:2,8:10:24.08:1149,24,0	0/0:20,0:20:57.17:0,57,3940	0/0:21,0:21:63.22:0,63,4634	1/1:6,4:8:18.06:669,18,0	1/1:1,6:7:21.06:858,21,0	1/1:4,2:6:12:398,12,0	0/0:11,0:11:27.09:0,27,1890	0/0:20,0:20:54.19:0,54,3321	0/0:10,0:10:24.08:0,24,1718	1/1:2,6:8:18.06:862,18,0	1/1:6,3:8:11.89:522,12,0	1/1:4,3:7:9.03:430,9,0	1/1:1,2:3:6.02:287,6,0
chr10	78693511	.	T	TA	4403.71	PASS	AB=0.588;AC=43;AF=0.768;AN=56;BaseQRankSum=2.539;DP=384;FS=27.162;HRun=13;HaplotypeScore=109.7011;InbreedingCoeff=0.6792;MQ=64.44;MQ0=3;MQRankSum=-3.043;QD=15.24;ReadPosRankSum=-2.251;VQSLOD=3.2144;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:21:45.85:238,46,0	1/1:2,5:7:14.96:129,15,0	0/0:17,1:11:15.15:0,15,75	0/0:20,0:12:6.63:0,7,57	1/1:2,9:13:6.04:157,6,0	1/1:1,14:15:32.87:293,33,0	1/1:1,11:12:30.03:279,30,0	1/1:13,6:20:15.08:246,15,0	1/1:1,7:9:11.18:133,11,0	1/1:1,2:3:9.01:83,9,0	1/1:3,12:15:29.94:264,30,0	0/1:4,7:11:2.56:121,0,3	0/1:2,9:12:2.73:108,0,3	0/0:7,0:8:13.90:0,14,87	1/1:2,11:14:35.74:300,36,0	1/1:5,7:12:29.20:242,29,0	0/0:22,0:22:50.15:0,50,339	0/0:23,0:25:57.56:0,58,379	1/1:6,8:15:12.02:215,12,0	1/1:11,11:22:19:434,19,0	1/1:3,6:9:8.14:109,8,0	1/1:2,8:11:14.92:122,15,0	0/1:5,9:14:2.55:121,0,3	1/1:2,8:11:20.86:182,21,0	1/1:5,7:13:23.98:214,24,0	1/1:7,5:12:23.99:211,24,0	1/1:5,4:9:20.99:184,21,0	1/1:4,0:5:4.66:19,5,0
chr10	78693589	.	T	TAC	5598.71	PASS	AB=1.000;AC=31;AF=0.574;AN=54;BaseQRankSum=8.126;DP=331;FS=35.831;HRun=0;HaplotypeScore=72.5067;InbreedingCoeff=0.9161;MQ=65.19;MQ0=2;MQRankSum=-2.853;QD=31.63;ReadPosRankSum=0.432;VQSLOD=3.6399;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,8:12:18.06:311,18,0	1/1:0,5:5:6.02:104,6,0	0/1:7,0:5:1.43:1,0,12	./.	1/1:7,8:15:24.05:361,24,0	0/0:17,0:16:39.07:0,39,483	0/0:12,0:12:36.10:0,36,459	1/1:5,22:27:69.12:984,69,0	0/0:7,0:7:15.05:0,15,195	1/1:1,10:11:33.07:538,33,0	1/1:6,5:11:9.03:156,9,0	0/0:7,0:7:15.05:0,15,200	0/0:12,0:12:33.11:0,33,439	0/0:9,0:9:24.08:0,24,319	1/1:3,7:10:24.05:361,24,0	1/1:0,6:6:14.92:259,15,0	0/0:21,0:21:57.16:0,57,739	0/0:22,0:21:54.10:0,54,665	1/1:2,3:4:12.01:177,12,0	1/1:3,13:16:39.13:671,39,0	1/1:2,6:8:18.02:279,18,0	0/0:9,0:9:18.05:0,18,224	0/0:18,0:18:51.17:0,51,678	0/0:10,0:10:30.03:0,30,359	1/1:2,14:16:18.05:280,18,0	1/1:3,7:10:24.07:385,24,0	1/1:2,6:8:21.05:333,21,0	1/1:2,8:10:24.08:399,24,0
chr10	78693634	.	T	TCACACACA	1579.08	PASS	AB=1.000;AC=18;AF=0.391;AN=46;BaseQRankSum=4.173;DP=265;FS=7.849;HRun=0;HaplotypeScore=87.3431;InbreedingCoeff=0.6689;MQ=64.69;MQ0=0;MQRankSum=-5.804;QD=20.78;ReadPosRankSum=-2.896;VQSLOD=0.7238;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:6,0:6:23.01:23,0,178	0/0:6,0:4:7.09:0,7,37	./.	0/0:25,0:25:63.20:0,63,1475	0/0:17,0:17:38.38:0,38,754	1/1:18,2:19:21.02:494,21,0	0/0:14,0:14:39.13:0,39,1036	1/1:5,3:8:15.05:336,15,0	0/1:5,0:5:0:0,0,0	0/0:10,0:10:21.07:0,21,558	0/0:17,0:17:45.15:0,45,1158	0/0:7,0:7:18.06:0,18,463	0/0:3,1:4:0.47:0,0,1	./.	0/0:24,0:24:63.22:0,63,1632	0/0:22,0:21:63.18:0,63,1608	1/1:4,0:3:4.83:116,5,0	1/1:5,1:6:3.01:50,3,0	./.	0/0:3,0:3:9.03:0,9,239	0/0:9,0:9:24.07:0,24,538	0/0:10,0:9:15.05:0,15,393	1/1:11,0:12:2.90:88,3,0	1/1:2,2:4:6.02:185,6,0	1/1:3,1:4:3.01:111,3,0	1/1:2,4:6:9.03:335,9,0
chr10	78693751	.	CTGTGTG	C	1008.04	PASS	AB=1.000;AC=30;AF=0.714;AN=42;BaseQRankSum=2.492;DP=437;FS=4.897;HRun=0;HaplotypeScore=100.0688;InbreedingCoeff=0.4277;MQ=68.40;MQ0=11;MQRankSum=-2.394;QD=4.44;ReadPosRankSum=-0.853;VQSLOD=0.8869;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:0.47:0,0,1	./.	./.	./.	1/1:13,0:15:6:65,6,0	1/1:13,5:17:6.02:91,6,0	1/1:14,0:13:3.01:60,3,0	./.	0/1:12,0:12:3.45:162,0,3	0/1:9,0:9:0:0,0,0	./.	1/1:16,0:15:6.02:112,6,0	1/1:13,0:13:0.66:56,1,0	0/0:12,0:12:15:0,15,237	1/1:8,0:10:6.49:85,6,0	1/1:9,0:10:0.47:1,0,0	0/0:23,0:23:23.75:0,24,461	0/0:22,0:22:26.78:0,27,539	./.	1/1:9,0:9:2.22:7,2,0	1/1:29,0:29:3.73:20,4,0	1/1:12,1:13:3.01:60,3,0	0/0:12,0:14:0.93:0,1,3	1/1:15,5:18:9.03:180,9,0	1/1:6,0:6:2.90:28,3,0	1/1:12,0:15:5.07:80,5,0	./.	1/1:14,0:15:9.03:126,9,0
chr10	78693865	.	TA	T	588.91	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.566;DP=515;FS=0.895;HRun=4;HaplotypeScore=70.5381;InbreedingCoeff=0.9945;MQ=93.07;MQ0=0;MQRankSum=-1.014;QD=25.60;ReadPosRankSum=2.959;VQSLOD=2.5393;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.24:0,78,1072	0/0:7,0:7:21.07:0,21,290	0/0:27,0:27:72.17:0,72,937	0/0:19,0:19:45.15:0,45,600	0/0:17,0:17:51.16:0,51,697	0/0:15,0:15:45.14:0,45,610	0/0:20,0:20:60.20:0,60,840	0/0:37,0:36:93.29:0,93,1271	1/1:0,23:23:57.17:684,57,0	0/0:15,0:15:45.15:0,45,630	0/0:12,0:12:36.12:0,36,504	0/0:26,0:26:75.23:0,75,1017	0/0:26,0:26:72.23:0,72,986	0/0:17,0:17:51.17:0,51,713	0/0:23,0:23:69.23:0,69,966	0/0:18,0:18:54.16:0,54,725	0/0:18,0:18:54.13:0,54,716	0/0:16,0:16:47.63:0,48,621	0/0:15,0:15:45.15:0,45,630	0/0:10,0:10:30.10:0,30,420	0/0:20,0:20:57.19:0,57,798	0/0:11,0:11:33.11:0,33,462	0/0:14,0:14:42.14:0,42,587	0/0:24,0:24:69.21:0,69,932	0/0:15,0:15:42.14:0,42,588	0/0:16,0:16:48.16:0,48,663	0/0:10,0:10:30.10:0,30,420	0/0:18,0:18:54.18:0,54,756
chr10	78695051	.	CAG	C	6422.97	PASS	AB=0.896;AC=35;AF=0.625;AN=56;BaseQRankSum=10.238;DP=498;FS=11.080;HRun=0;HaplotypeScore=79.0527;InbreedingCoeff=0.7335;MQ=64.18;MQ0=2;MQRankSum=-2.633;QD=19.64;ReadPosRankSum=2.341;VQSLOD=4.2184;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,17:27:56.67:614,57,0	1/1:2,5:8:14.88:157,15,0	0/0:18,0:16:23.37:0,23,291	0/0:22,0:16:19.86:0,20,242	1/1:7,12:20:32.93:370,33,0	0/1:15,1:16:2.66:3,0,443	0/0:15,0:16:30.09:0,30,456	1/1:11,24:35:69.16:792,69,0	1/1:3,10:14:29.92:336,30,0	1/1:3,10:13:30.06:334,30,0	1/1:3,8:12:26.91:300,27,0	0/0:18,0:18:45.15:0,45,714	0/1:14,2:16:32.37:32,0,453	0/0:22,1:23:3.36:0,3,536	1/1:6,16:23:0.26:464,0,0	1/1:5,10:16:32.93:371,33,0	0/0:24,0:24:57.18:0,57,868	0/1:15,2:18:43.56:44,0,460	1/1:8,9:18:26.87:284,27,0	1/1:3,11:15:32.93:371,33,0	1/1:5,21:27:59.64:671,60,0	0/0:12,0:12:27.09:0,27,429	0/0:11,0:11:27.09:0,27,430	0/0:27,0:27:57.19:0,57,902	1/1:2,6:8:18.06:215,18,0	1/1:3,8:11:24.07:286,24,0	1/1:3,17:21:47.98:550,48,0	1/1:1,6:8:20.90:229,21,0
chr10	78696191	.	GTT	G	271.97	PASS	AC=8;AF=1.00;AN=8;DP=56;FS=0.000;HRun=2;HaplotypeScore=5.3197;MQ=12.77;MQ0=41;QD=24.72;VQSLOD=1.8941;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	1/1:1,3:3:9.03:144,9,0	1/1:0,1:1:3.01:49,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:1,3:3:6.02:98,6,0	./.	./.	./.	./.	./.	./.	1/1:1,1:1:3.01:49,3,0	./.	./.	./.	./.
chr10	78696539	.	G	GCA	4183.04	PASS	AB=0.712;AC=29;AF=0.558;AN=52;BaseQRankSum=-9.182;DP=587;FS=4.818;HRun=0;HaplotypeScore=88.7273;InbreedingCoeff=-0.1444;MQ=58.81;MQ0=9;MQRankSum=0.470;QD=9.42;ReadPosRankSum=1.008;VQSLOD=2.8760;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:44:36.89:0,37,181	0/1:3,6:10:15.09:207,0,15	./.	./.	0/1:11,4:14:27.12:39,0,27	1/1:9,0:17:12.01:123,12,0	0/1:21,10:33:32.22:121,0,32	1/1:17,0:19:0.91:93,1,0	1/1:19,0:18:3:25,3,0	0/1:14,13:25:26.62:282,0,27	1/1:5,9:15:18.06:271,18,0	0/1:7,4:14:17.64:166,0,18	0/1:10,13:24:31.66:415,0,32	0/0:18,0:20:26.74:0,27,260	1/1:6,13:20:2.95:445,3,0	0/1:9,10:19:53.49:286,0,53	0/0:25,0:32:61.38:0,61,547	0/1:12,0:23:13.98:14,0,97	1/1:12,7:20:3.93:174,4,0	0/1:13,8:22:72.09:242,0,72	0/1:34,11:43:99:238,0,102	0/1:8,11:18:45.28:205,0,45	1/1:2,8:10:3.01:45,3,0	1/1:10,14:25:10.31:387,10,0	0/1:9,6:16:24.15:81,0,24	0/0:19,0:23:19.87:0,20,343	0/1:14,14:29:83.09:325,0,83	0/0:6,0:7:14.87:0,15,147
chr10	78696699	.	AT	A	666.35	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.862;DP=535;FS=4.368;HRun=8;HaplotypeScore=50.8137;InbreedingCoeff=0.8304;MQ=74.43;MQ0=0;MQRankSum=-2.006;QD=22.98;ReadPosRankSum=-0.532;VQSLOD=3.9405;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:81.01:761,81,0	0/0:11,1:12:7.12:0,7,358	0/0:10,0:8:7.88:0,8,76	0/0:15,0:13:14.83:0,15,157	0/0:17,0:17:48.13:0,48,560	0/0:19,0:19:54.17:0,54,652	0/0:16,1:17:13.15:0,13,442	0/0:36,0:36:99:0,99,1147	0/0:20,1:21:25.19:0,25,587	0/0:24,0:24:54.14:0,54,621	0/0:12,0:12:27.07:0,27,315	0/0:11,0:11:33.07:0,33,368	0/0:14,0:14:42.13:0,42,507	0/0:16,0:16:48.15:0,48,580	0/0:20,0:20:60.18:0,60,725	0/0:23,0:23:55.86:0,56,718	0/0:22,0:22:63.15:0,63,726	0/0:18,0:18:51.16:0,51,616	0/0:23,0:23:60.18:0,60,724	0/0:27,0:27:69.19:0,69,814	0/0:12,0:12:30.07:0,30,340	0/0:23,0:23:66.20:0,66,796	0/0:18,0:18:51.15:0,51,611	0/0:11,0:11:33.10:0,33,398	0/0:21,0:22:63.01:0,63,722	0/0:27,0:27:75.21:0,75,877	0/0:23,0:23:66.19:0,66,786	0/0:13,0:13:39.12:0,39,471
chr10	78699224	.	CCA	C	744.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.208;DP=680;FS=2.951;HRun=0;HaplotypeScore=80.5862;InbreedingCoeff=0.9974;MQ=87.97;MQ0=0;MQRankSum=-0.655;QD=28.65;ReadPosRankSum=2.260;VQSLOD=4.7757;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1826	0/0:14,0:14:42.14:0,42,746	0/0:23,0:23:62.88:0,63,1056	0/0:25,0:25:69.23:0,69,1141	0/0:40,0:40:99:0,114,2019	0/0:21,0:21:60.21:0,60,1080	0/0:24,0:24:69.24:0,69,1242	0/0:28,0:28:78.26:0,78,1343	1/1:0,26:26:60.20:840,60,0	0/0:34,0:34:99:0,99,1745	0/0:24,0:24:63.19:0,63,1054	0/0:22,0:22:66.23:0,66,1183	0/0:17,0:17:48.16:0,48,864	0/0:15,0:15:42.14:0,42,746	0/0:25,0:25:69.24:0,69,1234	0/0:23,1:24:24.21:0,24,1092	0/0:31,0:31:90.31:0,90,1609	0/0:26,0:26:75.23:0,75,1304	0/0:28,0:28:78.26:0,78,1376	0/0:16,0:16:45.15:0,45,801	0/0:21,0:21:63.22:0,63,1129	0/0:32,0:32:90.29:0,90,1571	0/0:27,0:27:72.24:0,72,1287	0/0:20,0:20:54.18:0,54,962	0/0:20,0:20:60.21:0,60,1072	0/0:24,0:24:63.19:0,63,1075	0/0:26,0:26:71.98:0,72,1265	0/0:10,0:10:30.10:0,30,540
chr10	78699715	.	AC	A	1000.26	PASS	AC=22;AF=0.478;AN=46;BaseQRankSum=8.981;DP=400;FS=5.656;HRun=4;HaplotypeScore=48.3805;InbreedingCoeff=0.7729;MQ=57.56;MQ0=15;MQRankSum=-8.532;QD=14.50;ReadPosRankSum=-1.872;VQSLOD=1.7959;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:13:18.05:211,18,0	1/1:1,3:2:6.02:72,6,0	0/0:34,0:12:33.11:0,33,448	0/0:28,1:13:16.14:0,16,338	./.	0/0:14,0:14:35.89:0,36,504	0/0:26,0:26:78.20:0,78,1052	./.	1/1:2,21:23:42.13:503,42,0	1/1:2,3:3:3.01:36,3,0	./.	0/0:21,0:21:60.19:0,60,821	0/0:22,0:22:60.20:0,60,840	0/0:22,0:21:51.15:0,51,680	1/1:1,2:3:3.01:34,3,0	1/1:1,3:4:3.01:34,3,0	0/0:42,0:41:99:0,108,1507	0/0:27,0:27:81.27:0,81,1134	1/1:1,2:2:3.01:36,3,0	./.	./.	0/0:26,0:26:72.24:0,72,1008	0/0:28,0:28:77.97:0,78,1056	0/0:27,0:27:75.25:0,75,1049	1/1:0,1:1:3.01:34,3,0	1/1:1,4:4:9.03:108,9,0	1/1:0,4:3:6.02:72,6,0	1/1:0,3:1:3.01:34,3,0
chr10	78700271	.	AT	A	911.14	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.087;DP=606;FS=17.452;HRun=1;HaplotypeScore=87.2013;InbreedingCoeff=0.9953;MQ=84.76;MQ0=1;MQRankSum=-2.482;QD=31.42;ReadPosRankSum=1.201;VQSLOD=2.1424;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:72.24:1006,72,0	0/0:12,0:12:36.12:0,36,572	0/0:20,0:20:57.57:0,58,784	0/0:18,0:19:45.67:0,46,635	0/0:17,0:17:51.17:0,51,802	0/0:19,0:19:57.18:0,57,881	0/0:19,0:19:57.19:0,57,895	0/0:31,0:31:90.29:0,90,1394	0/0:16,0:16:48.15:0,48,735	0/0:25,0:25:75.25:0,75,1179	0/0:10,0:10:30.09:0,30,454	0/0:25,0:25:75.21:0,75,1127	0/0:21,0:21:63.21:0,63,1003	0/0:21,0:21:63.18:0,63,957	0/0:28,0:28:84.29:0,84,1338	0/0:23,0:23:69.22:0,69,1071	0/0:27,0:27:81.18:0,81,1192	0/0:28,0:28:84.29:0,84,1342	0/0:23,0:23:69.19:0,69,1032	0/0:20,0:20:54.17:0,54,836	0/0:24,0:24:72.24:0,72,1136	0/0:21,0:21:63.21:0,63,1002	0/0:17,0:17:51.17:0,51,812	0/0:33,0:32:93.32:0,93,1479	0/0:22,0:22:63.19:0,63,972	0/0:19,0:19:57.17:0,57,868	0/0:28,0:28:84.25:0,84,1282	0/0:9,0:9:21.07:0,21,327
chr10	78700857	.	A	AACAC	1732.39	PASS	AB=1.000;AC=20;AF=0.400;AN=50;BaseQRankSum=-4.663;DP=544;FS=2.486;HRun=0;HaplotypeScore=129.9832;InbreedingCoeff=0.4940;MQ=67.26;MQ0=8;MQRankSum=-0.119;QD=6.90;ReadPosRankSum=-0.912;VQSLOD=2.5903;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:26:8.89:91,9,0	0/0:10,0:10:5.79:0,6,51	./.	./.	0/0:16,0:16:11.98:0,12,101	0/1:17,0:20:10.46:10,0,72	0/0:17,0:20:9.02:0,9,102	1/1:21,0:21:1.08:4,1,0	1/1:18,0:17:3.01:51,3,0	0/1:17,0:17:16.35:16,0,43	0/0:17,0:17:5.89:0,6,52	1/1:12,1:13:9.03:167,9,0	1/1:8,0:12:5.74:36,6,0	0/0:15,0:15:9.03:0,9,139	0/0:14,0:13:18:0,18,160	0/1:14,0:14:0.40:0,0,118	0/0:27,0:27:30.10:0,30,456	0/1:21,0:22:42.63:43,0,63	./.	0/0:17,0:17:11.89:0,12,105	0/0:28,0:28:17.87:0,18,152	1/1:25,3:28:33.09:586,33,0	1/1:19,0:19:8.27:91,8,0	1/1:36,4:40:29.07:804,29,0	0/0:20,0:20:14.89:0,15,130	0/0:13,0:13:5.95:0,6,45	0/0:13,0:13:7.32:0,7,76	0/0:5,0:5:9:0,9,78
chr10	78700899	.	CAA	C	5133.57	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=2.795;DP=616;FS=21.927;HRun=3;HaplotypeScore=111.8927;InbreedingCoeff=0.8348;MQ=69.35;MQ0=19;MQRankSum=2.478;QD=16.56;ReadPosRankSum=0.654;VQSLOD=1.1179;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:31:2.94:3,0,167	1/1:1,8:9:6.36:93,6,0	0/0:45,0:16:48:0,48,449	0/0:48,0:20:47.94:0,48,468	1/1:26,3:29:71.95:657,72,0	0/1:23,0:23:5.78:6,0,314	0/0:20,0:20:29.68:0,30,344	1/1:1,22:23:62.86:527,63,0	0/0:15,0:15:6:0,6,60	1/1:18,2:20:53.97:525,54,0	1/1:0,8:8:6.02:91,6,0	0/0:16,0:16:30.55:0,31,272	0/0:17,0:17:38.82:0,39,333	0/0:19,0:19:51.02:0,51,545	1/1:2,14:16:17.89:232,18,0	1/1:17,2:19:39.54:437,40,0	0/0:27,0:27:72.72:0,73,916	0/0:25,0:25:17.05:0,17,356	1/1:0,13:13:38.95:325,39,0	1/1:1,13:14:26.81:277,27,0	1/1:41,4:45:89.03:869,89,0	0/0:25,0:25:60.34:0,60,606	0/0:22,0:22:43.41:0,43,471	0/0:27,0:27:59.84:0,60,672	1/1:14,6:20:50.69:527,51,0	1/1:1,12:13:30.41:290,30,0	1/1:1,20:21:8.83:137,9,0	1/1:0,4:4:9.03:138,9,0
chr10	78700956	.	TA	T	6097.82	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.212;DP=620;FS=5.389;HRun=1;HaplotypeScore=78.6996;InbreedingCoeff=0.9781;MQ=95.96;MQ0=0;MQRankSum=-5.256;QD=39.09;ReadPosRankSum=3.134;VQSLOD=5.6141;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:87.27:0,87,1362	0/0:6,0:6:15.05:0,15,240	0/0:33,0:33:96.30:0,96,1484	0/0:26,0:26:72.20:0,72,1092	0/0:22,0:22:66.22:0,66,1049	1/1:0,24:24:66.22:923,66,0	1/1:1,25:26:72.19:984,72,0	0/0:31,0:31:93.31:0,93,1465	0/0:20,0:20:36.12:0,36,573	0/0:20,0:20:60.16:0,60,931	0/0:9,0:9:27.09:0,27,431	1/1:0,22:22:66.22:922,66,0	1/1:0,19:19:54.18:752,54,0	0/0:26,0:26:78.27:0,78,1247	0/0:19,0:19:36.12:0,36,576	0/0:20,0:20:60.20:0,60,957	0/0:23,0:23:69.24:0,69,1103	0/0:23,0:23:66.18:0,66,1002	0/0:29,0:29:87.26:0,87,1355	0/0:16,0:16:39.13:0,39,623	0/0:36,0:36:99:0,105,1642	1/1:0,21:21:54.18:755,54,0	1/1:0,22:22:63.21:881,63,0	1/1:0,22:22:63.21:881,63,0	0/0:14,0:14:42.13:0,42,648	0/0:19,0:19:57.19:0,57,912	0/0:29,0:29:54.15:0,54,809	0/0:2,0:2:6.02:0,6,96
chr10	78702028	.	AAG	A	1525.75	PASS	AB=0.881;AC=30;AF=0.536;AN=56;BaseQRankSum=1.878;DP=613;FS=25.409;HRun=0;HaplotypeScore=113.8443;InbreedingCoeff=-0.1329;MQ=59.69;MQ0=37;MQRankSum=-1.998;QD=3.18;ReadPosRankSum=-1.517;VQSLOD=0.8480;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:26:15.36:15,0,20	1/1:4,5:7:2.99:23,3,0	0/0:43,0:17:0:0,0,0	0/1:37,0:10:0:0,0,0	1/1:15,13:27:11.64:227,12,0	1/1:8,0:6:6.01:63,6,0	1/1:14,0:11:5.85:64,6,0	0/1:29,0:27:22.52:23,0,112	1/1:17,0:17:13.37:90,13,0	0/1:18,7:23:54.62:283,0,55	0/1:15,1:16:10.44:10,0,309	0/1:18,0:17:15.25:17,0,15	0/0:14,0:13:9.09:0,9,40	0/0:13,1:13:21.07:0,21,284	0/1:16,7:17:34.45:145,0,34	0/1:15,6:20:64.90:147,0,65	0/0:24,0:22:21.41:0,21,552	0/1:24,0:21:15.66:16,0,58	1/1:19,1:18:7.97:44,8,0	0/1:16,10:20:21.23:131,0,21	1/1:8,1:8:3.01:33,3,0	0/1:6,0:22:9.18:9,0,52	0/0:5,0:18:1.19:0,1,10	0/0:19,0:19:4.22:0,4,28	0/1:34,2:33:12.79:124,0,13	0/1:31,1:31:26.94:27,0,285	0/1:22,5:22:30.55:173,0,31	1/1:10,0:8:2.98:21,3,0
chr10	78702060	.	GAGAGAGAA	G	1742.77	PASS	AB=0.996;AC=20;AF=0.385;AN=52;BaseQRankSum=-0.342;DP=571;FS=4.049;HRun=0;HaplotypeScore=187.9810;InbreedingCoeff=-0.0073;MQ=44.69;MQ0=33;MQRankSum=0.492;QD=4.95;ReadPosRankSum=-0.031;VQSLOD=2.3484;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:20:18.65:116,19,0	0/1:10,0:8:8.36:27,0,8	./.	./.	0/0:23,0:22:29.07:0,29,203	1/1:14,0:12:32.98:321,33,0	1/1:16,0:12:9.54:102,10,0	0/0:31,0:28:41.25:0,41,269	0/1:21,0:21:84.75:85,0,161	0/1:29,0:25:61.05:61,0,185	0/0:19,0:18:35.33:0,35,268	0/1:19,0:18:77.70:195,0,78	0/1:14,0:13:6.90:167,0,7	0/0:19,0:17:39.04:0,39,583	0/1:26,0:19:43.34:43,0,59	0/1:23,0:22:96.06:96,0,97	0/0:25,0:23:65.30:0,65,843	1/1:27,0:24:33.08:509,33,0	0/1:18,0:16:49.02:77,0,49	0/1:26,0:20:15.48:15,0,89	0/0:13,0:12:2.02:0,2,11	0/1:28,0:28:75.08:75,0,180	0/0:24,0:23:4.55:0,5,193	0/0:9,11:19:3.88:0,4,131	0/0:33,0:30:23.60:0,24,136	0/1:33,0:31:3.36:3,0,412	0/1:19,0:15:15.78:16,0,93	0/0:6,0:5:1.82:0,2,5
chr10	78702064	.	G	GAA	2530.75	PASS	AB=0.978;AC=30;AF=0.577;AN=52;BaseQRankSum=-2.503;DP=562;FS=1.412;HRun=1;HaplotypeScore=151.0260;InbreedingCoeff=-0.3754;MQ=44.84;MQ0=31;MQRankSum=0.127;QD=4.92;ReadPosRankSum=0.098;VQSLOD=-0.5862;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:19:3.20:3,0,91	0/1:10,0:9:14.10:14,0,27	./.	./.	1/1:22,1:22:13.98:245,14,0	0/1:14,0:12:30.02:30,0,176	0/1:16,0:12:56.20:61,0,56	0/1:27,0:24:21.81:22,0,114	1/1:20,0:20:33.42:242,33,0	0/1:29,0:25:99:264,0,154	0/1:20,0:19:10.44:10,0,309	0/1:15,0:13:13.66:103,0,14	0/1:13,0:12:23.71:81,0,24	0/0:18,0:16:39.04:0,39,433	0/1:27,1:21:78.35:134,0,78	0/1:24,0:23:60.58:139,0,61	0/1:25,0:23:73.68:74,0,432	0/0:30,0:27:12.55:0,13,291	0/1:17,0:15:23.34:23,0,26	0/1:24,0:19:35.05:147,0,35	1/1:15,0:14:6.69:42,7,0	0/1:30,0:30:21.18:248,0,21	1/1:25,0:24:21.57:247,22,0	1/1:20,0:19:14.96:151,15,0	0/1:20,16:32:12.77:211,0,13	0/1:33,0:31:2.04:2,0,377	0/1:16,1:13:21.37:174,0,21	1/1:7,0:6:2.98:21,3,0
chr10	78702098	.	GAA	G	416.07	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=2.463;DP=574;FS=0.801;HRun=3;HaplotypeScore=157.7637;InbreedingCoeff=0.6839;MQ=50.26;MQ0=13;MQRankSum=-2.645;QD=6.71;ReadPosRankSum=0.382;VQSLOD=0.0627;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,7:28:38.67:510,39,0	0/0:8,0:8:17.08:0,17,123	0/0:4,0:4:12.04:0,12,165	0/0:9,0:8:24.08:0,24,334	0/0:18,0:18:41.24:0,41,352	0/0:19,0:18:50.41:0,50,467	0/0:19,0:17:49.69:0,50,477	0/0:21,0:20:59.31:0,59,456	0/0:17,0:17:34.99:0,35,270	0/0:19,0:17:37.37:0,37,211	0/0:17,0:17:23.93:0,24,204	0/0:16,0:14:37.34:0,37,619	0/0:11,0:11:30.08:0,30,472	0/0:24,0:22:60.14:0,60,964	0/1:29,0:26:3.15:3,0,40	0/0:23,0:22:15.01:0,15,193	0/0:17,0:16:45.62:0,46,721	0/0:31,0:29:80.91:0,81,832	0/0:22,0:22:41.02:0,41,384	0/0:25,0:22:51.57:0,52,487	0/0:19,0:18:13.35:0,13,74	0/0:24,0:24:60.20:0,60,1030	0/0:25,0:25:61.91:0,62,991	0/0:28,0:27:51.15:0,51,833	0/0:31,0:29:74.89:0,75,668	0/0:29,0:28:63.53:0,64,445	0/0:24,0:22:46.62:0,47,512	0/0:12,0:11:16.75:0,17,122
chr10	78702100	.	AAGAAAGAG	A	4630.97	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=11.119;DP=583;FS=3.227;HRun=0;HaplotypeScore=189.5472;InbreedingCoeff=0.7420;MQ=52.21;MQ0=12;MQRankSum=-4.742;QD=13.27;ReadPosRankSum=-4.100;VQSLOD=3.2413;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:28:41.01:46,0,41	1/1:8,0:8:17.67:188,18,0	0/0:5,0:5:15.04:0,15,159	0/0:10,0:9:23.85:0,24,239	1/1:17,1:18:20.01:232,20,0	0/0:19,0:18:47.44:0,47,413	0/0:20,0:18:43.79:0,44,371	1/1:24,0:23:47.88:522,48,0	0/1:17,0:17:31.37:31,0,239	1/1:18,0:16:39.02:550,39,0	1/1:16,0:16:19.94:108,20,0	0/0:18,0:16:41.23:0,41,662	0/0:12,0:12:31.84:0,32,418	0/0:24,0:22:60.01:0,60,1108	1/1:30,0:27:9.02:136,9,0	1/1:21,1:21:8.05:114,8,0	0/0:17,0:16:39.55:0,40,866	0/0:33,0:31:45.90:0,46,571	0/1:22,0:22:3.83:514,0,4	1/1:24,0:22:52.86:446,53,0	0/1:22,0:21:1.21:48,0,1	0/0:23,0:23:44.39:0,44,1010	0/0:25,0:25:57.17:0,57,959	0/0:28,0:27:51.03:0,51,865	1/1:27,2:28:44.01:443,44,0	1/1:30,0:29:57.64:599,58,0	1/1:23,0:22:50.49:505,50,0	1/1:13,0:12:17.60:147,18,0
chr10	78702104	.	AAGAG	A	4636.99	PASS	AB=0.761;AC=30;AF=0.536;AN=56;BaseQRankSum=12.206;DP=570;FS=0.373;HRun=0;HaplotypeScore=154.5615;InbreedingCoeff=0.7567;MQ=57.61;MQ0=10;MQRankSum=-3.215;QD=13.17;ReadPosRankSum=-1.858;VQSLOD=4.3206;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:29:34.06:156,34,0	1/1:7,0:7:17.93:159,18,0	0/0:6,0:6:18.04:0,18,187	0/0:14,0:13:35.85:0,36,349	1/1:16,1:17:25.79:255,26,0	0/0:18,0:18:11.43:0,11,197	0/0:17,0:16:23.02:0,23,167	1/1:23,0:22:63.75:540,64,0	0/1:16,1:18:59.12:127,0,59	1/1:15,1:14:39.02:429,39,0	1/1:0,17:17:28.62:176,29,0	0/0:18,0:16:32.72:0,33,513	0/0:12,0:12:30.03:0,30,361	0/0:24,0:22:57:0,57,756	1/1:3,27:28:9.02:137,9,0	1/1:6,16:21:8.05:78,8,0	0/1:17,0:17:1.64:2,0,455	0/0:35,0:33:38.18:0,38,413	0/1:5,16:21:4.69:434,0,5	1/1:21,1:21:53.55:430,54,0	0/1:2,17:18:3.19:45,0,3	0/0:23,0:23:48.83:0,49,753	0/0:27,0:27:62.65:0,63,815	0/0:24,0:23:50.95:0,51,672	1/1:26,1:27:48.47:504,48,0	1/1:4,23:26:56.86:527,57,0	1/1:21,1:22:56.67:490,57,0	1/1:13,0:12:17.61:147,18,0
chr10	78703520	.	C	CTG	16290.54	PASS	AB=0.538;AC=43;AF=0.768;AN=56;BaseQRankSum=-4.638;DP=944;FS=22.267;HRun=0;HaplotypeScore=162.8047;InbreedingCoeff=0.7158;MQ=59.77;MQ0=14;MQRankSum=-0.920;QD=21.98;ReadPosRankSum=5.139;VQSLOD=3.7967;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,1:47:11.92:107,12,0	0/1:1,8:9:18.58:228,0,19	0/0:42,0:27:35.72:0,36,395	0/0:64,0:39:65.96:0,66,811	0/1:5,27:34:1.39:963,0,1	1/1:5,1:26:32.99:315,33,0	1/1:5,1:21:8.40:194,8,0	1/1:11,25:36:41.03:1093,41,0	1/1:8,0:30:47.48:368,47,0	1/1:12,33:44:99:1632,108,0	1/1:5,10:15:15.04:244,15,0	1/1:10,1:43:90.05:834,90,0	1/1:6,1:35:78.06:750,78,0	0/0:31,0:32:87.08:0,87,1029	1/1:6,32:37:60.20:984,60,0	1/1:4,35:39:9.96:1180,10,0	0/0:41,0:43:62.18:0,62,1081	0/0:21,0:22:36.68:0,37,612	1/1:7,17:25:23.21:794,23,0	1/1:4,18:22:30.10:492,30,0	1/1:16,50:63:99:1722,105,0	1/1:7,0:30:53.98:470,54,0	1/1:7,1:34:53.98:500,54,0	1/1:15,3:42:48.03:467,48,0	1/1:3,19:22:7.99:651,8,0	1/1:2,20:22:25.94:848,26,0	0/1:6,30:36:5.64:964,0,6	1/1:2,18:21:30.10:492,30,0
chr10	78706293	.	AC	A	11605.63	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=13.771;DP=680;FS=1.581;HRun=2;HaplotypeScore=69.6441;InbreedingCoeff=0.9988;MQ=88.55;MQ0=0;MQRankSum=-0.876;QD=40.44;ReadPosRankSum=2.134;VQSLOD=5.1433;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,150,2330	1/1:0,11:11:29.97:419,30,0	0/0:30,0:30:81.06:0,81,1185	0/0:30,0:30:87.15:0,87,1253	1/1:0,19:19:57.19:791,57,0	0/0:18,0:18:54.18:0,54,855	0/0:28,0:28:84.25:0,84,1278	1/1:0,29:29:87.29:1212,87,0	0/0:18,0:18:54.18:0,54,861	1/1:0,24:24:72.24:1007,72,0	1/1:0,28:28:78.26:1091,78,0	0/0:28,0:28:84.27:0,84,1306	0/0:28,0:28:81.25:0,81,1269	0/0:28,0:28:84.29:0,84,1341	1/1:0,24:24:69.23:964,69,0	1/1:0,18:18:54.18:754,54,0	0/0:37,0:37:99:0,111,1744	0/0:30,0:30:90.31:0,90,1439	1/1:0,19:19:57.17:774,57,0	1/1:0,24:24:69.23:965,69,0	1/1:0,13:13:30.10:419,30,0	0/0:15,0:15:45.15:0,45,716	0/0:21,0:21:63.21:0,63,1003	0/0:31,0:31:93.32:0,93,1487	1/1:0,22:22:63.21:881,63,0	1/1:0,25:25:75.23:1028,75,0	1/1:0,25:25:75.25:1049,75,0	1/1:0,6:6:18.06:252,18,0
chr10	78707643	.	T	TAAA	6246.30	PASS	AB=0.638;AC=34;AF=0.607;AN=56;BaseQRankSum=-1.392;DP=672;FS=2.077;HRun=15;HaplotypeScore=125.5757;InbreedingCoeff=0.5745;MQ=71.60;MQ0=1;MQRankSum=-1.177;QD=11.94;ReadPosRankSum=-4.835;VQSLOD=1.2479;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:34:18.10:18,0,67	1/1:3,10:15:20.19:291,20,0	0/0:19,0:14:7.35:0,7,69	0/0:13,0:14:13.68:0,14,145	1/1:15,2:29:20.11:506,20,0	0/0:14,0:15:23.59:0,24,223	0/0:18,0:23:50.26:0,50,439	1/1:14,9:31:34.66:723,35,0	0/0:3,0:17:34.96:0,35,206	1/1:12,8:27:43.15:415,43,0	1/1:11,9:25:40.03:430,40,0	0/1:13,0:23:8.89:9,0,91	0/1:10,0:22:0.74:1,0,48	0/0:19,0:21:28.98:0,29,268	1/1:15,15:32:25.61:324,26,0	1/1:10,13:27:39.01:519,39,0	0/0:14,0:16:35.78:0,36,342	0/0:21,0:23:39.87:0,40,396	1/1:11,1:21:6.70:399,7,0	1/1:16,14:31:38.89:504,39,0	1/1:6,1:16:8.04:80,8,0	0/1:10,0:27:13.81:14,0,53	0/1:13,0:26:55.58:56,0,93	0/1:9,0:33:7.35:7,0,43	1/1:9,9:20:30.55:440,31,0	1/1:11,17:38:67.27:788,67,0	1/1:11,12:27:27.07:389,27,0	1/1:4,8:15:24.04:334,24,0
chr10	78708648	.	A	AT	9870.89	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-13.256;DP=528;FS=3.511;HRun=6;HaplotypeScore=48.1952;InbreedingCoeff=0.9888;MQ=76.11;MQ0=0;MQRankSum=-2.574;QD=32.58;ReadPosRankSum=-0.339;VQSLOD=4.8586;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.10:0,60,603	1/1:0,11:11:30.10:377,30,0	0/0:21,0:21:48.06:0,48,478	0/0:12,0:10:24.30:0,24,206	1/1:1,27:28:78.25:978,78,0	0/0:22,0:22:63.14:0,63,643	0/0:6,0:6:18.04:0,18,184	1/1:4,28:32:84.25:1043,84,0	0/0:17,0:17:45.06:0,45,444	1/1:3,28:31:84.27:1057,84,0	1/1:2,23:25:66.17:812,66,0	0/0:20,0:20:54.12:0,54,550	0/0:24,0:24:66.13:0,66,665	0/0:16,0:16:48.11:0,48,490	1/1:4,12:16:36.12:453,36,0	1/1:2,17:19:17.54:536,18,0	0/0:17,0:17:39.08:0,39,398	0/0:15,0:15:36.04:0,36,356	1/1:1,20:21:60.19:755,60,0	1/1:2,29:31:87.28:1095,87,0	1/1:1,4:5:12.04:151,12,0	0/0:4,0:4:12.03:0,12,122	0/0:18,0:18:51.09:0,51,507	0/0:10,0:10:30.05:0,30,299	1/1:1,13:14:36.12:453,36,0	1/1:2,22:24:66.19:813,66,0	1/1:6,22:28:72.23:897,72,0	1/1:0,18:18:36.12:453,36,0
chr10	78708964	.	A	AGT	5317.95	PASS	AB=0.648;AC=16;AF=0.286;AN=56;BaseQRankSum=-0.184;DP=741;FS=2.232;HRun=0;HaplotypeScore=166.4637;InbreedingCoeff=0.7575;MQ=62.89;MQ0=15;MQRankSum=2.740;QD=24.62;ReadPosRankSum=-0.262;VQSLOD=5.0905;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,39:53:29.46:1372,29,0	0/0:14,0:14:39.12:0,39,467	0/0:53,0:23:6.84:0,7,192	0/0:65,0:26:20.68:0,21,169	0/0:19,0:21:41.07:0,41,402	1/1:8,20:28:27.26:913,27,0	0/1:7,9:17:14.69:267,0,15	0/0:35,0:35:41.01:0,41,449	1/1:7,0:21:26.58:212,27,0	0/0:27,0:27:51.11:0,51,595	0/0:19,0:19:36.10:0,36,420	0/1:9,8:18:23.86:514,0,24	1/1:9,15:23:15.82:706,16,0	0/0:29,0:29:78.16:0,78,884	0/0:22,0:24:59.78:0,60,636	0/0:16,0:18:41.95:0,42,471	0/0:28,0:29:75.06:0,75,871	0/0:35,0:36:72.10:0,72,978	0/0:23,0:22:24.02:0,24,277	0/0:23,0:23:33.09:0,33,384	0/0:46,0:46:88.81:0,89,999	1/1:2,14:17:29.77:467,30,0	1/1:7,12:19:27.09:431,27,0	1/1:6,13:19:0.05:436,0,0	0/0:13,0:14:20.85:0,21,214	0/0:25,0:25:39.11:0,39,459	0/0:14,0:14:33.99:0,34,397	0/0:7,0:7:12.02:0,12,132
chr10	78709121	.	G	GTA	26377	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=1.931;DP=909;FS=0.000;HRun=0;HaplotypeScore=262.0686;InbreedingCoeff=0.9976;MQ=56.91;MQ0=4;MQRankSum=-2.503;QD=34.80;ReadPosRankSum=2.388;VQSLOD=4.3887;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,29:31:39.13:750,39,0	1/1:3,15:18:27.09:518,27,0	0/0:39,0:24:59.25:0,59,645	0/0:21,0:14:36.04:0,36,458	1/1:3,30:33:30.10:554,30,0	1/1:0,32:31:75.26:1444,75,0	1/1:3,23:26:18.31:748,18,0	1/1:2,38:40:99:1804,111,0	1/1:0,29:29:63.22:1206,63,0	1/1:4,45:49:99:2491,132,0	1/1:4,27:31:30.10:577,30,0	1/1:2,28:30:69.24:1327,69,0	1/1:6,32:38:75.26:1422,75,0	0/0:36,0:36:90.21:0,90,1290	1/1:3,45:48:93.32:1788,93,0	1/1:1,36:37:87.30:1672,87,0	0/0:26,0:26:66.12:0,66,949	0/0:29,0:29:66.20:0,66,979	1/1:4,19:22:63.15:1100,63,0	1/1:2,42:44:45.09:866,45,0	1/1:2,31:34:60.19:1124,60,0	1/1:4,36:39:36.12:693,36,0	1/1:1,26:28:39.13:751,39,0	1/1:1,26:27:51.17:982,51,0	1/1:2,31:33:38.88:963,39,0	1/1:4,35:39:85.10:1647,85,0	1/1:0,23:23:45.15:859,45,0	1/1:2,21:23:57.20:1092,57,0
chr10	78709256	.	T	TA	163.43	PASS	AB=0.846;AC=3;AF=0.054;AN=56;BaseQRankSum=7.189;DP=943;FS=10.479;HRun=0;HaplotypeScore=319.2728;InbreedingCoeff=0.1367;MQ=38.34;MQ0=7;MQRankSum=-4.231;QD=1.78;ReadPosRankSum=0.110;VQSLOD=0.9618;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:12.01:0,12,167	0/0:25,1:26:12.72:0,13,223	0/0:29,0:10:19.28:0,19,228	0/0:31,0:12:22.71:0,23,347	0/0:35,2:37:20.96:0,21,293	0/0:22,2:24:26.04:0,26,354	0/0:24,0:24:32.91:0,33,460	0/0:81,0:81:99:0,163,2219	0/0:23,3:26:31.34:0,31,410	0/1:62,4:67:34.71:35,0,1514	0/0:37,7:44:21.45:0,21,278	0/0:27,1:28:34.71:0,35,413	0/0:39,0:39:61.41:0,61,840	0/0:30,0:30:41.61:0,42,550	0/0:45,0:45:54.18:0,54,753	0/0:31,0:31:65.60:0,66,826	0/0:9,0:11:6.02:0,6,84	0/0:16,1:17:13.93:0,14,322	0/0:13,0:11:21.07:0,21,293	0/0:59,6:65:58:0,58,734	0/0:25,0:25:9.88:0,10,121	0/0:47,6:53:41.74:0,42,586	0/0:41,2:43:15.86:0,16,211	0/1:11,0:12:0:0,0,0	0/0:40,1:41:20.31:0,20,224	0/0:42,2:44:9.39:0,9,1099	0/0:28,0:28:36.07:0,36,565	0/1:7,6:13:17.48:217,0,17
chr10	78709260	.	T	TTG	1124.56	PASS	AB=0.808;AC=13;AF=0.232;AN=56;BaseQRankSum=8.671;DP=912;FS=39.748;HRun=0;HaplotypeScore=316.4004;InbreedingCoeff=-0.0867;MQ=39.14;MQ0=6;MQRankSum=-6.609;QD=2.66;ReadPosRankSum=-0.973;VQSLOD=1.0124;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:8.79:0,9,68	0/1:14,10:25:96.23:96,0,105	0/0:27,0:11:11.74:0,12,85	0/0:31,0:12:1.56:0,2,82	0/0:20,14:36:13.70:0,14,105	0/0:17,6:23:11.41:0,11,163	0/0:22,2:24:3.21:0,3,231	0/0:81,0:80:99:0,155,949	0/1:15,9:24:74.83:165,0,75	0/1:58,9:68:99:375,0,549	0/0:29,5:42:15.67:0,16,129	0/0:18,7:26:22.29:0,22,149	0/1:28,8:37:9.74:10,0,257	0/1:19,8:28:26.45:26,0,136	0/0:40,4:44:41.62:0,42,307	0/1:24,5:29:54.17:54,0,275	0/0:11,0:11:2.94:0,3,18	0/0:15,0:17:10.12:0,10,101	0/0:11,0:10:11.66:0,12,71	0/1:44,11:62:1.83:2,0,281	0/0:22,0:24:8.89:0,9,63	0/1:35,8:51:6.58:7,0,145	0/0:24,8:40:20.93:0,21,144	0/1:8,2:11:0:0,0,0	0/0:26,4:37:13.25:0,13,129	0/1:39,4:45:99:175,0,342	0/1:24,5:29:99:207,0,187	1/1:6,2:13:12.92:150,13,0
chr10	78709263	.	TGCGC	T	253.11	PASS	AB=0.906;AC=6;AF=0.107;AN=56;BaseQRankSum=6.566;DP=884;FS=7.062;HRun=0;HaplotypeScore=324.9618;InbreedingCoeff=-0.0202;MQ=40.33;MQ0=5;MQRankSum=-4.153;QD=1.30;ReadPosRankSum=-2.042;VQSLOD=1.0685;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,1:14:9.03:0,9,116	0/1:22,2:24:26.54:27,0,180	0/0:25,0:9:17.95:0,18,175	0/0:31,0:13:21.99:0,22,174	0/0:32,3:35:14.94:0,15,175	0/0:23,0:23:28.06:0,28,303	0/0:19,2:21:34.58:0,35,445	0/0:83,0:82:99:0,121,1460	0/0:21,1:22:18.58:0,19,220	0/1:61,7:68:99:201,0,1182	0/0:37,5:42:25.36:0,25,247	0/0:26,0:26:25.35:0,25,282	0/0:37,0:37:55.66:0,56,560	0/0:26,1:27:24:0,24,290	0/0:40,0:40:44.86:0,45,521	0/0:29,0:29:29.03:0,29,549	0/0:10,1:11:3:0,3,29	0/0:15,1:16:10.17:0,10,172	0/0:12,0:11:14.36:0,14,120	0/0:55,4:58:14.08:0,14,520	0/0:23,1:24:6.86:0,7,105	0/0:41,7:48:24.52:0,25,285	0/0:34,3:37:22.75:0,23,234	0/1:10,0:10:0:0,0,0	0/1:30,7:37:9.57:10,0,208	0/1:42,0:42:8.49:8,0,646	0/0:27,0:27:30.61:0,31,458	0/1:9,4:13:99:118,0,138
chr10	78709265	.	C	CAT	637.05	PASS	AB=0.989;AC=10;AF=0.179;AN=56;BaseQRankSum=10.880;DP=858;FS=44.318;HRun=0;HaplotypeScore=304.4081;InbreedingCoeff=0.0420;MQ=40.62;MQ0=5;MQRankSum=-6.397;QD=2.52;ReadPosRankSum=2.693;VQSLOD=1.1827;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:9:0,9,86	0/1:24,0:24:51.30:51,0,142	0/0:25,0:10:14.97:0,15,148	0/0:31,0:11:20.43:0,20,157	0/0:35,0:35:13.84:0,14,140	0/0:23,0:23:31.29:0,31,269	0/0:20,0:20:20.55:0,21,330	0/0:81,0:80:99:0,164,1304	0/1:20,0:20:95.21:95,0,99	0/1:68,0:68:99:279,0,735	0/0:41,0:41:22.02:0,22,211	0/0:26,0:26:25.47:0,25,208	0/0:36,0:36:23.18:0,23,428	0/1:26,0:26:10.41:10,0,178	0/0:37,0:37:44.98:0,45,426	0/1:28,0:28:7.64:8,0,360	0/0:11,0:11:2.99:0,3,24	0/0:13,1:14:10.24:0,10,131	0/0:13,0:12:17.88:0,18,134	0/0:57,0:56:0.90:0,1,391	0/0:20,2:22:11.98:0,12,103	0/0:47,0:47:9.13:0,9,206	0/0:37,0:37:21.50:0,22,201	0/1:9,1:10:0:0,0,0	0/0:35,0:35:19.77:0,20,180	0/1:38,0:38:99:110,0,464	0/1:26,0:26:99:113,0,247	1/1:13,0:13:10.96:108,11,0
chr10	78709290	.	T	TA	1427.89	PASS	AB=0.799;AC=14;AF=0.259;AN=54;BaseQRankSum=7.162;DP=877;FS=42.062;HRun=0;HaplotypeScore=263.5658;InbreedingCoeff=-0.1962;MQ=35.56;MQ0=5;MQRankSum=-5.197;QD=3.25;ReadPosRankSum=6.347;VQSLOD=1.1047;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:9.01:0,9,107	0/1:16,10:26:99:118,0,265	0/0:31,0:14:36.11:0,36,486	0/0:23,0:7:18.06:0,18,247	0/0:25,16:41:18.04:0,18,251	0/0:14,7:21:28.83:0,29,388	0/1:20,3:23:24.01:24,0,307	0/1:58,12:69:57.73:58,0,1326	0/1:12,11:23:99:166,0,145	0/1:60,11:71:99:499,0,1261	0/0:40,5:45:20.12:0,20,292	0/0:15,9:24:26.36:0,26,306	0/1:22,9:31:7.43:7,0,462	0/1:14,11:25:18.26:18,0,289	0/0:29,7:36:39.13:0,39,544	0/1:18,8:26:44.96:45,0,524	0/0:11,0:11:3.01:0,3,42	0/0:11,0:11:11.83:0,12,139	0/1:17,4:19:11.69:12,0,410	0/0:52,14:65:8.73:0,9,614	0/0:22,0:22:18.84:0,19,228	0/1:39,9:48:21.05:21,0,308	0/0:35,9:44:24.98:0,25,337	./.	0/0:34,4:38:25.08:0,25,297	0/1:32,6:38:99:214,0,680	0/1:19,6:25:99:177,0,279	1/1:11,2:13:8.02:223,8,0
chr10	78709294	.	TTG	T	600.83	PASS	AB=0.882;AC=9;AF=0.167;AN=54;BaseQRankSum=-0.647;DP=843;FS=0.000;HRun=0;HaplotypeScore=256.7319;InbreedingCoeff=-0.0947;MQ=34.06;MQ0=4;MQRankSum=-1.451;QD=2.02;ReadPosRankSum=-0.249;VQSLOD=1.6631;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,1:10:3.01:0,3,36	0/0:20,0:23:17.42:0,17,199	0/0:31,0:14:21.03:0,21,299	0/0:19,1:6:2.47:0,2,36	0/1:32,2:40:0:0,0,1	0/0:21,0:21:9.69:0,10,209	0/1:19,0:22:4.59:5,0,173	0/0:69,0:68:71.72:0,72,1054	0/1:9,6:23:24.33:24,0,49	0/1:59,7:70:99:172,0,929	0/1:32,1:43:1.39:1,0,6	0/0:22,0:23:12.04:0,12,177	0/0:29,0:30:18.04:0,18,231	0/0:24,0:25:12.04:0,12,154	0/0:31,4:35:3.01:0,3,33	0/0:22,1:23:15.05:0,15,191	./.	0/0:9,0:11:6.67:0,7,122	0/1:17,2:18:41.45:63,0,41	0/0:52,3:62:16.71:0,17,176	0/1:12,5:20:47.76:48,0,114	0/0:42,0:49:17.73:0,18,255	0/0:37,0:43:18.52:0,19,234	0/0:9,1:11:0:0,0,0	0/0:29,3:37:6.02:0,6,65	0/1:25,9:36:99:281,0,403	0/1:17,6:24:99:127,0,163	0/0:8,0:13:24:0,24,286
chr10	78710689	.	C	CG	11443.19	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-6.231;DP=637;FS=3.444;HRun=2;HaplotypeScore=77.8469;InbreedingCoeff=0.9986;MQ=86.74;MQ0=0;MQRankSum=-3.866;QD=39.19;ReadPosRankSum=1.513;VQSLOD=5.4956;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,150,1840	1/1:1,12:13:36.11:501,36,0	0/0:27,0:27:75.23:0,75,921	0/0:23,0:23:60.13:0,60,708	1/1:1,20:22:57.10:765,57,0	0/0:25,0:25:66.21:0,66,816	0/0:24,0:24:69.22:0,69,854	1/1:3,29:32:87.25:1209,87,0	1/1:0,25:25:75.25:1078,75,0	1/1:0,24:24:72.21:998,72,0	1/1:1,10:11:24.08:345,24,0	0/0:29,0:29:78.22:0,78,951	0/0:28,0:28:75.23:0,75,924	0/0:21,0:21:57.18:0,57,705	1/1:0,16:16:42.14:604,42,0	1/1:0,22:22:60.20:862,60,0	0/0:30,0:30:90.28:0,90,1115	0/0:28,0:28:84.26:0,84,1038	1/1:3,13:16:39.09:537,39,0	1/1:0,18:18:54.14:751,54,0	1/1:0,25:25:72.24:1036,72,0	0/0:19,0:19:51.15:0,51,618	0/0:18,0:18:48.15:0,48,593	0/0:21,0:21:51.16:0,51,632	1/1:1,18:19:51.17:732,51,0	1/1:2,19:21:57.19:817,57,0	1/1:0,22:21:66.22:948,66,0	1/1:0,6:6:18.06:259,18,0
chr10	78711142	.	GCACACA	G	5454.01	PASS	AB=0.579;AC=27;AF=0.482;AN=56;BaseQRankSum=8.703;DP=704;FS=1.948;HRun=0;HaplotypeScore=161.5800;InbreedingCoeff=0.8318;MQ=51.91;MQ0=14;MQRankSum=-6.605;QD=18.06;ReadPosRankSum=-2.313;VQSLOD=4.3627;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:24:21.06:0,21,536	1/1:2,6:9:9.03:168,9,0	0/0:28,0:9:6.02:0,6,122	0/0:39,0:18:16.14:0,16,430	1/1:6,12:18:3.01:63,3,0	0/0:18,0:21:37.64:0,38,892	0/0:27,0:31:51.62:0,52,1135	1/1:20,10:28:8.50:351,9,0	0/0:5,0:26:38.77:0,39,846	1/1:5,19:25:40.76:888,41,0	1/1:4,10:15:6.02:105,6,0	0/0:18,0:20:54.18:0,54,1506	0/0:22,0:25:48.16:0,48,1341	0/0:24,0:26:60.20:0,60,1633	1/1:2,23:26:31.49:633,31,0	1/1:5,16:22:30.10:588,30,0	0/0:25,0:32:71.02:0,71,1788	0/0:29,0:27:59.26:0,59,1735	1/1:5,14:20:44.76:699,45,0	1/1:7,7:15:9.03:168,9,0	1/1:25,19:42:6.02:119,6,0	0/0:32,0:34:75.22:0,75,2062	0/0:17,0:18:42.14:0,42,1241	0/0:46,0:47:83.90:0,84,2241	1/1:4,19:24:3.64:300,4,0	1/1:7,15:22:47.30:721,47,0	0/1:6,16:22:3.96:296,0,4	1/1:2,6:8:18.06:355,18,0
chr10	78711951	.	C	CCTT	3847.36	PASS	AB=0.957;AC=21;AF=0.389;AN=54;BaseQRankSum=-4.037;DP=486;FS=8.170;HRun=0;HaplotypeScore=153.4325;InbreedingCoeff=0.2431;MQ=39.35;MQ0=14;MQRankSum=-0.492;QD=13.22;ReadPosRankSum=-1.439;VQSLOD=2.4490;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:66.63:0,67,715	1/1:3,10:13:9.36:152,9,0	./.	0/0:5,0:1:2.90:0,3,16	0/1:23,0:23:61.45:287,0,61	0/0:14,0:11:28.11:0,28,283	0/0:13,0:12:22.01:0,22,261	1/1:25,0:22:30.01:304,30,0	0/0:13,0:12:22.61:0,23,123	0/0:19,0:17:14.72:0,15,110	0/1:14,0:14:53.33:53,0,57	0/1:12,0:11:8.19:8,0,316	0/0:21,0:20:29.09:0,29,460	0/0:18,0:18:52.30:0,52,570	0/1:28,0:28:15.98:512,0,16	1/1:20,0:20:36.65:624,37,0	0/0:14,0:14:18.58:0,19,281	0/0:12,0:12:19.41:0,19,317	0/1:17,0:13:36.89:104,0,37	1/1:19,0:19:0.64:346,1,0	0/1:13,0:13:72.97:135,0,73	0/0:18,0:18:35.50:0,36,397	0/0:17,0:17:44.68:0,45,546	0/1:21,0:21:10.35:10,0,345	0/1:9,15:23:41.88:81,0,42	1/1:26,0:26:14.79:566,15,0	0/1:29,0:27:8.04:503,0,8	1/1:7,0:7:13.85:160,14,0
chr10	78711954	.	TC	T	2864.08	PASS	AB=0.731;AC=13;AF=0.241;AN=54;BaseQRankSum=-4.976;DP=460;FS=4.505;HRun=2;HaplotypeScore=128.0169;InbreedingCoeff=-0.1481;MQ=38.78;MQ0=13;MQRankSum=1.461;QD=13.02;ReadPosRankSum=-3.280;VQSLOD=1.6385;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:66.98:0,67,747	0/1:13,0:13:60.60:61,0,102	./.	0/0:5,0:1:1.55:0,2,4	0/1:16,7:23:99:204,0,232	0/0:13,0:10:28.21:0,28,318	0/0:12,0:11:27.02:0,27,369	0/1:20,4:21:99:183,0,201	0/0:12,0:11:23.68:0,24,149	0/0:16,0:15:28.14:0,28,187	0/1:13,1:14:33.52:34,0,108	0/0:12,0:11:14.92:0,15,357	0/0:20,0:19:35.48:0,35,634	0/0:18,0:18:52.88:0,53,606	0/1:15,12:27:99:364,0,378	0/1:3,16:19:38.53:504,0,39	0/0:14,0:14:25.55:0,26,384	0/0:12,0:12:9.17:0,9,329	0/1:9,3:9:89.61:90,0,160	0/1:8,10:18:99:299,0,168	0/1:3,8:11:71.22:112,0,71	0/0:17,0:17:37.87:0,38,448	0/0:16,0:16:44.83:0,45,569	0/0:21,0:21:6.11:0,6,429	0/0:23,0:22:4.25:0,4,130	0/1:8,17:25:94.36:544,0,94	0/1:11,16:25:99:469,0,258	1/1:2,5:7:10.19:152,10,0
chr10	78711989	.	TA	T	32.94	PASS	AC=6;AF=1.00;AN=6;DP=8;FS=0.000;HRun=1;HaplotypeScore=12.7281;MQ=128.76;MQ0=0;QD=6.59;VQSLOD=0.4896;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:38,3,0	./.	./.	./.	./.	1/1:0,1:1:2.80:13,3,0	./.	./.	./.	1/1:0,3:2:5.85:47,6,0	./.	./.	./.	./.	./.	./.	./.
chr10	78712071	.	G	GCT	520	PASS	AB=0.850;AC=30;AF=0.833;AN=36;BaseQRankSum=-2.213;DP=55;FS=6.793;HRun=0;HaplotypeScore=21.5709;InbreedingCoeff=0.1799;MQ=151.11;MQ0=0;MQRankSum=-2.822;QD=13.00;ReadPosRankSum=-0.589;VQSLOD=1.4371;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,0:1:3:26,3,0	0/1:8,6:13:73.05:267,0,73	0/0:5,0:6:8.61:0,9,51	1/1:1,0:1:3:25,3,0	./.	1/1:4,0:4:4.81:29,5,0	1/1:3,0:3:6.22:41,6,0	./.	1/1:1,0:1:3.01:37,3,0	1/1:1,0:1:1.25:3,1,0	./.	./.	1/1:1,0:1:2.99:23,3,0	1/1:2,0:2:3:25,3,0	1/1:1,0:1:0.47:1,0,0	./.	1/1:3,0:3:5.46:29,5,0	./.	1/1:1,0:1:3:25,3,0	0/0:2,0:2:0.46:0,0,1	1/1:1,0:1:2.98:22,3,0	1/1:2,0:2:3:26,3,0	./.	./.	1/1:3,0:3:5.60:37,6,0	0/1:1,0:1:0:0,0,0	./.
chr10	78712072	.	G	GATC	3643.21	PASS	AB=0.919;AC=47;AF=0.839;AN=56;BaseQRankSum=-7.005;DP=349;FS=5.580;HRun=0;HaplotypeScore=357.3258;InbreedingCoeff=-0.1804;MQ=67.19;MQ0=0;MQRankSum=-0.816;QD=10.44;ReadPosRankSum=-5.958;VQSLOD=1.0947;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:8:0.78:8,0,1	1/1:9,0:9:11.46:85,11,0	0/1:6,8:13:68.43:458,0,68	0/1:3,0:7:16.84:105,0,17	0/1:22,0:22:11.10:82,0,11	1/1:9,0:9:15.06:117,15,0	1/1:16,0:16:24.56:221,25,0	1/1:9,0:9:21.62:283,22,0	1/1:12,0:11:23.61:156,24,0	1/1:15,0:15:29.06:270,29,0	1/1:10,0:10:14.92:106,15,0	0/1:10,0:10:0.54:30,0,1	0/1:8,0:8:6.42:29,0,6	1/1:15,0:15:1.03:108,1,0	1/1:16,0:16:4.05:129,4,0	1/1:24,0:24:15.43:150,15,0	1/1:3,0:3:5.54:26,6,0	1/1:6,0:6:14.14:122,14,0	1/1:4,0:4:8.52:104,9,0	0/1:20,0:20:0.14:73,0,0	1/1:8,0:8:8.21:76,8,0	0/1:22,0:22:41.04:68,0,41	1/1:13,0:13:22.16:159,22,0	0/1:12,0:12:16.96:32,0,17	1/1:12,0:12:3.38:31,3,0	1/1:23,0:23:42.70:423,43,0	1/1:19,0:19:7.80:161,8,0	1/1:3,0:3:6.56:30,7,0
chr10	78712240	.	GC	G	11261.10	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=6.117;DP=638;FS=9.266;HRun=3;HaplotypeScore=73.0168;InbreedingCoeff=0.9994;MQ=81.53;MQ0=0;MQRankSum=1.095;QD=34.44;ReadPosRankSum=1.551;VQSLOD=5.1875;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.20:0,78,1080	1/1:1,15:16:45.14:558,45,0	0/0:20,0:20:57.18:0,57,794	0/0:23,0:23:57.13:0,57,749	1/1:2,22:24:63.19:772,63,0	0/0:15,0:15:42.14:0,42,603	0/0:35,0:35:99:0,102,1467	1/1:0,35:35:99:1252,102,0	0/0:22,0:22:60.20:0,60,862	1/1:0,23:22:66.21:814,66,0	1/1:0,14:14:33.10:402,33,0	0/0:16,0:16:45.15:0,45,642	0/0:15,0:15:45.15:0,45,647	0/0:20,0:20:57.19:0,57,819	1/1:1,23:24:66.21:817,66,0	1/1:0,22:22:59.85:742,60,0	0/0:33,0:33:99:0,99,1402	0/0:19,0:19:57.17:0,57,802	1/1:0,20:20:60.19:737,60,0	1/1:0,24:24:72.23:892,72,0	1/1:0,43:43:99:1525,123,0	0/0:14,0:14:24.07:0,24,325	0/0:19,0:19:51.07:0,51,621	0/0:30,0:30:87.29:0,87,1250	1/1:0,16:16:42.13:520,42,0	1/1:0,24:24:63.20:781,63,0	1/1:0,34:34:93.29:1152,93,0	1/1:0,8:8:24.08:298,24,0
chr10	78712640	.	TACAC	T	2220.29	PASS	AB=0.814;AC=18;AF=0.333;AN=54;BaseQRankSum=-2.760;DP=612;FS=39.216;HRun=0;HaplotypeScore=126.8164;InbreedingCoeff=0.6335;MQ=54.09;MQ0=14;MQRankSum=1.263;QD=9.14;ReadPosRankSum=0.563;VQSLOD=1.5329;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:43:99:150,0,287	0/0:9,0:10:6.01:0,6,78	./.	0/0:35,0:15:2.99:0,3,23	0/0:20,0:18:11.96:0,12,140	1/1:6,9:15:9.50:142,10,0	1/1:14,19:33:30.10:477,30,0	0/0:34,0:32:27.34:0,27,280	1/1:16,0:16:12.45:101,12,0	0/0:18,0:17:9.03:0,9,188	0/0:6,0:14:0:0,0,0	1/1:3,17:21:39.11:600,39,0	1/1:7,10:17:15.05:225,15,0	0/0:23,0:24:47.67:0,48,915	0/0:12,0:18:11.98:0,12,166	0/0:13,0:15:9.03:0,9,156	0/0:12,0:11:11.78:0,12,203	0/1:9,12:21:44.94:246,0,45	0/0:13,0:12:18.06:0,18,278	0/0:22,0:21:8.04:0,8,63	0/0:40,0:39:12.03:0,12,176	1/1:9,11:21:7.47:99,7,0	1/1:5,7:12:6.02:96,6,0	1/1:21,20:41:1.41:267,1,0	0/0:19,0:19:10.73:0,11,121	0/0:14,0:17:27.55:0,28,474	0/0:13,0:15:27.49:0,27,348	0/0:10,0:13:18.06:0,18,353
chr10	78712669	.	ACACACACG	A	990.47	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-1.095;DP=647;FS=6.192;HRun=0;HaplotypeScore=165.0668;InbreedingCoeff=-0.1871;MQ=53.35;MQ0=29;MQRankSum=-0.476;QD=3.17;ReadPosRankSum=-8.278;VQSLOD=-0.3513;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:42:99:184,0,994	0/1:8,0:8:31.93:32,0,98	0/0:44,0:8:13.53:0,14,147	0/1:48,0:12:24.45:27,0,24	0/0:18,0:14:14.08:0,14,210	0/0:15,0:15:23.99:0,24,285	0/0:24,0:24:36.97:0,37,434	0/1:32,0:31:99:262,0,306	1/1:4,13:17:14.71:267,15,0	0/1:16,0:16:65.74:66,0,247	1/1:11,0:11:0.47:1,0,0	0/1:23,0:23:24.84:25,0,364	0/0:20,0:20:35.79:0,36,396	0/0:27,0:27:59.05:0,59,1857	0/1:17,0:17:63.14:63,0,240	0/1:12,0:12:6.90:7,0,263	0/0:16,0:14:22.23:0,22,587	0/0:27,0:27:47.57:0,48,583	0/1:16,0:13:33.75:34,0,311	0/1:19,0:18:31.14:31,0,87	0/0:43,0:42:8.39:0,8,207	0/0:28,0:28:41.81:0,42,397	0/0:16,0:15:0.36:0,0,213	0/0:41,0:40:56.83:0,57,600	0/1:14,0:14:10.76:11,0,142	0/1:18,0:18:99:107,0,700	0/1:19,0:18:31.46:31,0,440	0/0:16,0:16:21.02:0,21,589
chr10	78712673	.	A	ACG	1684.48	PASS	AB=0.966;AC=20;AF=0.357;AN=56;BaseQRankSum=2.469;DP=654;FS=12.493;HRun=0;HaplotypeScore=124.8318;InbreedingCoeff=0.1014;MQ=53.59;MQ0=28;MQRankSum=0.288;QD=5.07;ReadPosRankSum=-0.208;VQSLOD=1.8222;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:42:99:155,0,260	1/1:10,0:10:11.08:77,11,0	0/0:49,0:13:31.93:0,32,273	0/0:47,0:13:25.82:0,26,253	0/1:17,1:14:2.08:143,0,2	0/0:15,0:15:23.87:0,24,182	0/0:24,0:24:38.72:0,39,301	0/1:32,0:31:99:265,0,104	0/0:17,0:17:14.40:0,14,91	0/1:16,0:16:9.62:139,0,10	1/1:11,0:11:2.66:25,3,0	0/0:24,0:24:44.79:0,45,338	0/0:21,0:21:38.14:0,38,281	0/0:24,0:24:59.76:0,60,688	1/1:17,0:17:17.05:136,17,0	0/1:11,0:11:1.25:92,0,1	0/0:16,0:14:16.36:0,16,219	0/0:26,0:26:53.67:0,54,397	0/1:16,0:13:88.17:88,0,112	0/1:20,0:19:59.18:80,0,59	0/1:19,18:42:31.12:53,0,31	0/1:27,0:27:1.11:1,0,289	0/0:17,0:16:23.93:0,24,189	0/0:42,0:41:59.68:0,60,475	0/1:15,0:15:7.25:104,0,7	0/1:18,0:18:99:183,0,104	0/1:18,0:17:19.41:194,0,19	1/1:17,1:18:0.04:117,0,0
chr10	78712677	.	G	GCACA	5140.02	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-4.606;DP=668;FS=0.985;HRun=0;HaplotypeScore=137.8739;InbreedingCoeff=0.9040;MQ=55.50;MQ0=24;MQRankSum=-0.738;QD=16.63;ReadPosRankSum=-2.925;VQSLOD=3.9437;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:45,0:45:3.72:478,0,4	1/1:11,0:12:18.03:246,18,0	0/0:50,0:13:32.55:0,33,396	0/0:47,0:17:23.63:0,24,335	1/1:18,0:14:14.70:341,15,0	0/0:17,0:17:24.04:0,24,333	0/0:26,0:26:44.47:0,44,691	1/1:27,0:26:51.15:745,51,0	0/0:16,0:16:11.67:0,12,122	1/1:4,14:18:27.07:402,27,0	1/1:10,1:11:2.78:50,3,0	0/0:27,0:27:45.15:0,45,707	0/0:21,0:21:39.58:0,40,555	0/0:26,0:26:48.15:0,48,755	1/1:12,2:14:23.29:330,23,0	1/1:9,2:11:15.05:285,15,0	0/0:18,0:16:27.11:0,27,423	0/0:24,0:24:54.10:0,54,771	1/1:19,0:17:28.60:351,29,0	1/1:18,0:17:11.67:187,12,0	1/1:43,0:44:15.45:213,15,0	0/0:28,0:28:45.48:0,45,641	0/0:19,0:18:23.81:0,24,356	0/0:39,0:39:59.98:0,60,886	1/1:18,0:18:21.02:271,21,0	1/1:19,0:19:32.84:405,33,0	1/1:16,1:16:38.87:550,39,0	1/1:4,13:18:15.02:287,15,0
chr10	78712837	.	TG	T	12245.24	PASS	AB=0.583;AC=53;AF=0.946;AN=56;BaseQRankSum=-1.802;DP=430;FS=0.000;HRun=4;HaplotypeScore=114.6609;InbreedingCoeff=0.2857;MQ=51.72;MQ0=1;MQRankSum=-2.442;QD=28.81;ReadPosRankSum=2.386;VQSLOD=3.8700;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:23:48.14:570,48,0	1/1:0,5:5:12.04:144,12,0	0/1:2,5:5:35.75:58,0,36	0/0:3,2:1:0:0,0,0	1/1:0,15:15:39.12:468,39,0	1/1:1,13:14:36.11:429,36,0	1/1:1,17:18:48.15:573,48,0	1/1:2,7:9:18.05:207,18,0	1/1:0,14:13:33.10:396,33,0	1/1:2,18:19:48.15:576,48,0	1/1:0,6:6:18.06:216,18,0	1/1:1,24:24:66.20:789,66,0	1/1:0,17:16:48.14:567,48,0	1/1:2,24:26:60.18:718,60,0	1/1:1,25:25:63.19:748,63,0	1/1:1,17:17:42.13:500,42,0	1/1:0,9:9:24.07:281,24,0	1/1:0,10:9:21.06:252,21,0	1/1:1,12:13:36.11:432,36,0	1/1:0,10:10:24.07:283,24,0	1/1:0,24:23:57.17:681,57,0	1/1:1,14:14:36.11:431,36,0	1/1:2,16:18:42.13:503,42,0	1/1:2,18:19:45.13:531,45,0	1/1:5,19:24:57.17:682,57,0	1/1:0,17:17:51.15:605,51,0	1/1:4,12:15:36.11:431,36,0	1/1:0,5:5:15.04:175,15,0
chr10	78712894	.	CA	C	3078.25	PASS	AC=50;AF=0.962;AN=52;BaseQRankSum=1.496;DP=204;FS=0.000;HRun=3;HaplotypeScore=68.4234;InbreedingCoeff=0.1574;MQ=32.54;MQ0=3;MQRankSum=-1.732;QD=15.63;ReadPosRankSum=1.181;VQSLOD=3.1370;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,7:10:12.04:148,12,0	1/1:0,11:9:18.06:222,18,0	0/0:1,0:1:3.01:0,3,43	./.	1/1:2,4:5:12.04:144,12,0	1/1:3,3:6:5.90:74,6,0	1/1:5,4:7:6.02:74,6,0	1/1:1,3:2:3.01:37,3,0	1/1:1,5:5:3.01:37,3,0	1/1:2,5:5:9.01:110,9,0	1/1:3,1:4:3.01:37,3,0	1/1:2,12:11:21.05:246,21,0	1/1:2,6:7:15.03:173,15,0	1/1:1,13:14:27.08:330,27,0	1/1:2,16:16:24.07:296,24,0	1/1:4,13:16:24.07:297,24,0	1/1:1,3:4:3.01:37,3,0	1/1:1,4:4:9.03:111,9,0	1/1:4,4:8:8.98:94,9,0	./.	1/1:1,4:3:3.01:37,3,0	1/1:1,4:5:6.02:74,6,0	1/1:0,6:4:6.02:74,6,0	1/1:2,5:5:5.52:73,6,0	1/1:2,6:8:12.04:148,12,0	1/1:0,5:5:12.04:148,12,0	1/1:0,5:5:9.03:109,9,0	1/1:0,4:1:3.01:37,3,0
chr10	78712911	.	AGC	A	6406.92	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=1.434;DP=267;FS=4.299;HRun=0;HaplotypeScore=84.8390;InbreedingCoeff=0.3461;MQ=29.85;MQ0=5;MQRankSum=-1.732;QD=24.45;ReadPosRankSum=1.021;VQSLOD=5.2949;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,6:7:12:145,12,0	1/1:0,9:7:12.04:177,12,0	0/0:2,0:1:3:0,3,27	./.	1/1:0,5:4:9.03:131,9,0	1/1:0,9:8:15.05:205,15,0	1/1:0,16:14:36.12:523,36,0	1/1:0,10:9:21.07:309,21,0	1/1:0,13:12:27.09:391,27,0	1/1:2,7:7:12.04:172,12,0	1/1:1,3:4:9.02:114,9,0	1/1:2,22:20:39.13:564,39,0	1/1:2,11:11:18.06:265,18,0	1/1:3,12:15:27.09:397,27,0	1/1:4,19:20:33.11:485,33,0	1/1:3,21:22:45.15:662,45,0	1/1:2,4:6:9.03:132,9,0	1/1:1,3:4:6.02:88,6,0	1/1:0,8:7:18.06:265,18,0	1/1:2,6:8:8.81:70,9,0	1/1:0,10:9:18.06:251,18,0	1/1:1,3:4:3.01:44,3,0	1/1:2,5:4:9.03:121,9,0	1/1:1,4:4:9.03:132,9,0	1/1:2,6:8:15.01:189,15,0	1/1:0,7:7:21.07:309,21,0	1/1:1,7:7:12.04:176,12,0	1/1:1,5:3:6.02:88,6,0
chr10	78712928	.	TC	T	6800.86	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=0.372;DP=371;FS=0.000;HRun=4;HaplotypeScore=94.7964;InbreedingCoeff=0.3892;MQ=26.09;MQ0=10;MQRankSum=1.623;QD=19.00;ReadPosRankSum=1.587;VQSLOD=4.0829;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,12:13:24.51:272,25,0	1/1:1,11:10:18.05:215,18,0	0/0:8,0:1:3.01:0,3,42	./.	1/1:1,7:7:9.02:108,9,0	1/1:1,17:16:29.84:359,30,0	1/1:4,14:16:30.09:357,30,0	1/1:5,18:22:45.04:539,45,0	1/1:3,12:14:27.08:323,27,0	1/1:1,11:9:24.07:286,24,0	1/1:0,6:6:6.02:72,6,0	1/1:4,19:19:30.09:360,30,0	1/1:1,16:14:18.05:216,18,0	1/1:0,23:23:45.14:539,45,0	1/1:1,18:16:36.11:431,36,0	1/1:2,26:25:60.18:719,60,0	1/1:0,5:5:9.03:108,9,0	1/1:2,4:6:6.02:72,6,0	1/1:3,11:11:21.06:252,21,0	1/1:2,14:16:15.05:179,15,0	1/1:2,9:10:9.03:106,9,0	1/1:1,11:11:15.04:177,15,0	1/1:1,12:10:15.04:178,15,0	1/1:0,3:2:3.01:36,3,0	1/1:4,10:14:24.07:286,24,0	1/1:1,12:13:33.10:396,33,0	1/1:1,9:9:12.04:144,12,0	1/1:1,5:3:6.02:72,6,0
chr10	78713059	.	GAC	G	734.67	PASS	AB=0.853;AC=31;AF=0.738;AN=42;BaseQRankSum=4.624;DP=547;FS=6.555;HRun=0;HaplotypeScore=84.1746;InbreedingCoeff=0.2463;MQ=67.92;MQ0=17;MQRankSum=0.000;QD=2.23;ReadPosRankSum=2.558;VQSLOD=1.1413;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:34:2.84:14,3,0	1/1:6,0:8:2.84:14,3,0	./.	./.	1/1:9,0:15:8.52:42,9,0	1/1:13,3:15:2.87:32,3,0	./.	./.	1/1:12,0:16:11.36:56,11,0	./.	0/0:6,0:9:0:0,0,0	1/1:16,2:16:6.02:63,6,0	1/1:18,1:17:6:55,6,0	0/0:14,0:14:9:0,9,109	1/1:20,0:25:8.52:42,9,0	1/1:18,3:22:11.70:91,12,0	0/0:28,1:27:4.82:0,5,333	0/1:18,4:22:15.46:25,0,15	0/1:10,0:11:0.03:10,0,0	./.	1/1:24,0:24:2.84:14,3,0	0/1:15,3:18:16.88:26,0,17	1/1:8,0:11:5.85:46,6,0	1/1:20,14:36:29.74:281,30,0	./.	1/1:19,0:20:2.84:14,3,0	1/1:7,0:9:5.68:28,6,0	0/0:14,0:12:1.77:0,2,4
chr10	78713315	.	GTTCTGAC	G	995.54	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.145;DP=550;FS=5.470;HRun=0;HaplotypeScore=132.1768;InbreedingCoeff=0.8570;MQ=90.38;MQ0=0;MQRankSum=-6.215;QD=71.11;ReadPosRankSum=1.806;VQSLOD=3.9897;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,4104	0/0:6,0:6:15.05:0,15,598	0/0:20,0:20:53.38:0,53,1553	0/0:23,0:24:60.17:0,60,2087	0/0:8,0:8:24.08:0,24,958	0/0:23,0:23:66.23:0,66,2639	0/0:25,0:25:66.23:0,66,2511	0/0:21,0:21:51.16:0,51,1844	1/1:0,14:14:42.14:1090,42,0	0/0:14,0:14:42.13:0,42,1429	0/0:3,0:3:9.03:0,9,354	0/0:31,0:31:93.32:0,93,3649	0/0:27,0:27:75.26:0,75,2982	0/0:24,0:24:72.25:0,72,2697	0/0:24,0:24:69.24:0,69,2641	0/0:20,0:20:60.21:0,60,2340	0/0:37,0:37:99:0,105,3911	0/0:17,0:17:51.18:0,51,2036	0/0:17,0:17:42.14:0,42,1387	0/0:4,0:4:9.03:0,9,345	0/0:42,0:42:99:0,114,4368	0/0:13,0:13:39.13:0,39,1463	0/0:8,0:8:15.05:0,15,535	0/0:35,0:35:90.31:0,90,3452	0/0:14,0:14:36.12:0,36,1399	0/0:17,0:17:45.15:0,45,1799	0/0:18,0:18:54.19:0,54,2124	0/0:6,0:6:15.05:0,15,599
chr10	78714084	.	A	AGTT	26541.80	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-7.379;DP=566;FS=12.720;HRun=0;HaplotypeScore=76.9525;InbreedingCoeff=0.9867;MQ=71.84;MQ0=0;MQRankSum=-4.521;QD=56.59;ReadPosRankSum=-0.472;VQSLOD=5.8753;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:27:60.16:1311,60,0	1/1:0,8:8:24.08:512,24,0	0/0:10,0:10:17.75:0,18,179	0/0:13,0:13:10.87:0,11,70	1/1:0,29:31:78.22:1692,78,0	1/1:0,16:17:36.12:784,36,0	1/1:1,18:19:42.06:855,42,0	1/1:4,32:38:99:2083,102,0	1/1:1,17:18:45.15:1018,45,0	1/1:2,21:24:72.22:1523,72,0	1/1:0,24:25:69.24:1531,69,0	1/1:2,16:18:45.15:1019,45,0	1/1:0,22:24:63.22:1390,63,0	0/0:16,0:16:45.15:0,45,750	1/1:1,16:18:45.15:1019,45,0	1/1:4,12:16:39.10:836,39,0	0/0:38,0:38:99:0,114,1889	0/0:20,0:20:57.16:0,57,912	1/1:1,14:15:42.14:897,42,0	1/1:3,24:27:72.25:1599,72,0	1/1:1,8:9:20.99:380,21,0	1/1:1,14:15:45.15:982,45,0	1/1:1,21:22:57.16:1243,57,0	1/1:3,10:13:24.08:530,24,0	1/1:0,20:20:51.18:1156,51,0	1/1:1,25:26:78.23:1676,78,0	1/1:1,26:27:75.26:1691,75,0	1/1:0,12:12:36.12:815,36,0
chr10	78714449	.	CTACA	C	2895.12	PASS	AB=1.000;AC=30;AF=0.556;AN=54;BaseQRankSum=3.557;DP=733;FS=5.272;HRun=0;HaplotypeScore=194.0781;InbreedingCoeff=0.8469;MQ=61.59;MQ0=11;MQRankSum=-5.986;QD=7.15;ReadPosRankSum=1.964;VQSLOD=2.6412;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:44:46.02:0,46,781	1/1:8,0:8:3:28,3,0	./.	0/0:28,0:20:0.47:0,0,1	1/1:29,0:29:23.90:203,24,0	0/0:19,0:19:26.86:0,27,323	0/0:27,0:27:8.82:0,9,54	0/1:32,0:32:0:0,0,0	0/0:9,0:22:12.01:0,12,152	1/1:32,0:32:29.70:259,30,0	1/1:30,0:30:26.94:231,27,0	0/0:33,0:33:41.85:0,42,543	0/0:16,0:16:17.95:0,18,241	1/1:14,14:28:27.09:417,27,0	1/1:27,0:27:24:213,24,0	1/1:34,0:34:39.04:363,39,0	0/0:27,0:27:37.58:0,38,742	1/1:13,17:31:16.28:404,16,0	1/1:21,0:21:9.01:84,9,0	1/1:16,0:16:11.99:106,12,0	0/1:23,0:23:0.01:0,0,0	0/0:31,0:31:32.50:0,32,287	0/0:26,0:26:11.99:0,12,123	0/0:20,0:20:9.01:0,9,141	1/1:25,0:25:24.01:217,24,0	1/1:31,0:31:32.81:277,33,0	1/1:27,0:26:23.81:207,24,0	1/1:11,0:11:9.01:84,9,0
chr10	78714484	.	CATACATACAT	C	11227.24	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=2.364;DP=712;FS=5.493;HRun=0;HaplotypeScore=199.7588;InbreedingCoeff=0.9395;MQ=51.43;MQ0=42;MQRankSum=-4.575;QD=32.73;ReadPosRankSum=2.922;VQSLOD=4.3131;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:82.15:0,82,2553	1/1:1,6:6:3.01:102,3,0	0/0:29,0:17:44.90:0,45,562	0/0:17,0:10:24.95:0,25,296	1/1:3,29:30:6.55:726,7,0	0/0:25,0:24:29.88:0,30,820	0/0:30,0:27:17.84:0,18,237	1/1:6,29:27:69.20:963,69,0	0/0:23,0:23:39.13:0,39,902	1/1:3,38:38:84.05:1690,84,0	1/1:5,25:28:30.10:907,30,0	0/0:26,0:25:44.91:0,45,1409	0/0:20,0:18:20.99:0,21,643	0/0:26,0:26:60.17:0,60,1089	1/1:1,17:17:24.08:797,24,0	1/1:2,29:29:39.13:1319,39,0	0/0:29,0:29:78.63:0,79,2427	0/0:27,0:27:58.44:0,58,1097	1/1:5,12:15:34.41:648,34,0	1/1:3,23:23:12.04:397,12,0	1/1:20,0:18:28.08:324,28,0	0/0:33,0:31:53.87:0,54,791	0/0:23,0:23:21.53:0,22,410	0/0:21,0:19:9.03:0,9,391	1/1:2,27:27:24.08:803,24,0	1/1:1,24:24:59.96:1454,60,0	1/1:0,17:17:23.86:792,24,0	1/1:1,14:14:9.03:305,9,0
chr10	78714492	.	CAT	C	4425.04	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=7.339;DP=707;FS=0.825;HRun=0;HaplotypeScore=161.6832;InbreedingCoeff=0.7601;MQ=59.09;MQ0=42;MQRankSum=-5.512;QD=11.20;ReadPosRankSum=6.727;VQSLOD=4.4975;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:84.90:0,85,1114	1/1:6,1:6:3:26,3,0	0/0:35,0:26:75.09:0,75,912	0/0:15,0:10:30.05:0,30,364	1/1:31,1:30:6.34:173,6,0	0/0:25,0:24:24.12:0,24,175	0/0:31,0:28:8.18:0,8,36	1/1:29,5:25:54.17:783,54,0	0/0:24,0:24:39.11:0,39,504	1/1:40,3:39:69.12:843,69,0	1/1:27,2:27:29.69:263,30,0	0/0:26,0:25:27.24:0,27,336	0/0:20,0:18:12.16:0,12,134	0/1:27,0:27:12.80:13,0,404	1/1:17,1:17:23.95:201,24,0	1/1:29,2:29:38.99:342,39,0	0/0:26,1:27:28.42:0,28,1012	0/1:29,0:29:14.41:14,0,367	1/1:16,1:15:32.60:385,33,0	1/1:23,3:23:11.97:100,12,0	1/1:8,8:14:19.62:270,20,0	0/0:29,1:28:3.11:0,3,227	0/0:19,0:19:11.12:0,11,73	0/0:19,0:17:8.99:0,9,102	1/1:27,2:27:23.97:205,24,0	1/1:25,0:24:45.03:530,45,0	1/1:17,0:16:23.81:196,24,0	1/1:15,0:14:9:79,9,0
chr10	78714494	.	T	TACACAC	2484.73	PASS	AB=0.903;AC=21;AF=0.375;AN=56;BaseQRankSum=0.112;DP=714;FS=21.231;HRun=0;HaplotypeScore=199.4784;InbreedingCoeff=0.3675;MQ=59.26;MQ0=38;MQRankSum=0.834;QD=6.57;ReadPosRankSum=-0.743;VQSLOD=1.2414;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:43:22.60:23,0,812	0/0:7,0:6:3.01:0,3,38	0/0:34,0:26:75.05:0,75,1271	0/0:12,0:10:30.04:0,30,550	0/0:32,0:30:20.74:0,21,185	1/1:4,21:25:12.04:336,12,0	0/1:5,25:28:0:0,0,0	1/1:34,0:25:53.63:400,54,0	0/1:23,0:23:62.64:63,0,506	0/1:42,0:39:87.20:297,0,87	0/0:29,0:27:1.05:0,1,154	1/1:8,19:28:17.06:678,17,0	1/1:5,15:19:6.02:204,6,0	0/0:27,0:27:63.20:0,63,1137	0/0:19,0:18:22.01:0,22,269	0/0:31,0:29:38.70:0,39,447	0/0:28,0:28:72.46:0,72,1267	0/0:30,0:30:66.27:0,66,1006	0/1:16,0:15:83.22:130,0,83	0/0:26,0:23:9.46:0,9,91	0/1:15,0:16:17.18:108,0,17	1/1:6,24:28:5.98:85,6,0	1/1:0,0:19:7.08:100,7,0	1/1:7,12:17:3.01:71,3,0	0/0:29,0:27:21.50:0,21,247	0/1:25,0:24:99:169,0,144	0/0:17,0:16:18.26:0,18,231	0/0:15,0:14:9.03:0,9,115
chr10	78715072	.	TACACACAC	T	98.39	PASS	AB=0.910;AC=3;AF=0.060;AN=50;BaseQRankSum=2.495;DP=460;FS=2.031;HRun=0;HaplotypeScore=89.9774;InbreedingCoeff=-0.1231;MQ=36.68;MQ0=58;MQRankSum=-2.416;QD=1.45;ReadPosRankSum=-0.131;VQSLOD=1.3562;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:17:3.48:0,3,89	./.	0/0:46,0:2:3.01:0,3,64	0/0:61,0:1:3.01:0,3,81	./.	0/0:12,0:12:6.02:0,6,207	0/0:18,0:15:9.03:0,9,328	0/0:17,0:7:18.06:0,18,586	0/0:4,0:4:9.03:0,9,292	0/0:12,0:10:30.10:0,30,933	0/0:5,0:5:6.02:0,6,190	0/0:14,0:12:12.03:0,12,277	0/1:13,6:16:99:135,0,396	0/0:14,0:14:16.61:0,17,602	0/0:19,0:14:6.02:0,6,194	0/0:16,0:15:11.98:0,12,283	0/0:17,0:20:42.14:0,42,1442	0/0:18,0:19:39.13:0,39,1456	0/0:12,0:8:21.07:0,21,676	./.	0/0:40,0:35:7.95:0,8,258	0/1:18,0:17:2.10:2,0,268	0/0:9,0:8:9.03:0,9,350	0/1:30,1:27:48.96:49,0,725	0/0:4,0:4:3.01:0,3,53	0/0:9,0:8:22.32:0,22,709	0/0:4,0:3:9.03:0,9,226	0/0:3,0:3:6.02:0,6,195
chr10	78715096	.	C	CAG	93.62	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=5.692;DP=667;FS=9.736;HRun=0;HaplotypeScore=94.9469;InbreedingCoeff=0.1436;MQ=39.58;MQ0=91;MQRankSum=1.216;QD=0.65;ReadPosRankSum=6.361;VQSLOD=0.2153;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:25:20.46:0,20,151	0/0:4,0:4:5.99:0,6,48	0/0:60,0:3:8.89:0,9,59	0/0:73,0:2:5.99:0,6,48	0/0:12,0:9:11.97:0,12,96	0/0:17,0:16:4.32:0,4,44	0/0:33,0:28:0.11:0,0,81	0/0:12,0:10:11.84:0,12,169	1/1:0,10:10:9.03:172,9,0	0/0:20,0:14:41.60:0,42,314	0/1:10,0:9:5.33:5,0,82	0/0:26,0:23:8.32:0,8,107	0/0:22,0:21:5.09:0,5,102	0/0:16,0:16:35.63:0,36,357	0/0:28,0:21:19.65:0,20,159	0/1:16,0:15:10.21:10,0,47	0/0:25,0:23:53.96:0,54,592	0/0:20,0:20:47.97:0,48,528	0/0:26,0:17:44.53:0,45,347	0/0:6,0:6:8.98:0,9,73	0/1:63,0:50:6.55:7,0,138	0/0:24,0:23:21.41:0,21,247	0/0:17,0:15:29.97:0,30,266	0/1:44,0:38:1.46:1,0,112	0/0:7,0:6:8.94:0,9,68	0/0:24,0:20:25.28:0,25,326	0/0:8,0:7:17.86:0,18,133	0/0:7,0:6:12.82:0,13,92
chr10	78715106	.	C	CAT	2040.28	PASS	AB=0.895;AC=24;AF=0.429;AN=56;BaseQRankSum=6.994;DP=625;FS=4.204;HRun=0;HaplotypeScore=89.1592;InbreedingCoeff=-0.4943;MQ=42.18;MQ0=87;MQRankSum=-0.961;QD=4.96;ReadPosRankSum=-0.177;VQSLOD=1.8829;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:19:23.14:0,23,171	0/1:5,0:5:15:38,0,15	0/0:59,0:3:4.90:0,5,30	0/0:75,0:2:5.88:0,6,36	0/1:10,0:8:42.98:43,0,74	0/1:9,0:17:58.90:62,0,59	0/1:13,20:34:77.76:78,0,124	0/1:8,0:7:50.52:54,0,51	1/1:10,0:10:8.01:34,8,0	0/1:16,0:12:63.38:63,0,134	1/1:11,0:9:20.92:167,21,0	0/1:12,0:23:60.37:60,0,86	0/1:16,1:18:99:138,0,104	0/0:14,0:14:35.84:0,36,375	0/1:28,0:24:62.84:179,0,63	0/1:15,0:15:52.57:115,0,53	0/0:21,0:19:45.02:0,45,535	0/0:17,0:17:41.89:0,42,490	0/1:21,0:15:64.16:64,0,119	0/1:6,0:6:35:35,0,57	0/1:55,1:45:99:159,0,155	0/1:15,2:18:84.13:210,0,84	0/1:17,0:16:58.37:58,0,104	0/1:13,1:40:96.67:228,0,97	0/1:8,0:7:41.97:42,0,56	0/1:11,12:21:99:233,0,107	0/1:8,0:6:24.02:76,0,24	0/1:9,0:8:63.98:67,0,64
chr10	78715153	.	T	TAC	719.45	PASS	AB=0.972;AC=21;AF=0.457;AN=46;BaseQRankSum=-0.645;DP=672;FS=2.911;HRun=0;HaplotypeScore=126.0730;InbreedingCoeff=0.3019;MQ=52.78;MQ0=16;MQRankSum=0.829;QD=1.94;ReadPosRankSum=-0.626;VQSLOD=2.5561;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:5.43:0,5,28	./.	./.	0/1:33,0:10:0:0,0,0	0/0:23,0:23:6:0,6,64	1/1:22,1:22:12.01:136,12,0	1/1:35,0:30:5.69:55,6,0	1/1:23,0:21:2.97:20,3,0	1/1:10,0:11:9.02:101,9,0	1/1:26,2:26:6.49:89,6,0	./.	0/1:21,0:21:0:0,0,0	0/1:13,0:13:0:0,0,0	0/0:14,0:16:5.68:0,6,28	0/1:30,3:31:32.36:32,0,39	0/1:14,2:16:45.65:75,0,46	0/0:19,0:19:7.26:0,7,67	0/0:8,0:8:2.84:0,3,14	./.	0/0:18,0:17:3:0,3,32	1/1:72,0:62:32.49:304,32,0	0/0:22,0:21:3:0,3,32	./.	0/1:34,0:31:13.57:14,0,112	0/0:17,0:16:3:0,3,32	0/0:36,0:35:2:0,2,12	1/1:11,2:13:3.47:27,3,0	0/1:15,0:14:0:0,0,0
chr10	78716035	.	AG	A	18207.49	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=5.601;DP=683;FS=0.000;HRun=3;HaplotypeScore=71.3031;InbreedingCoeff=0.9990;MQ=83.77;MQ0=0;MQRankSum=-6.732;QD=32.81;ReadPosRankSum=3.384;VQSLOD=5.2078;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,48:49:99:1449,117,0	1/1:0,13:13:36.11:446,36,0	0/0:19,0:19:57.16:0,57,744	0/0:24,0:23:62.12:0,62,756	1/1:2,17:19:48.15:595,48,0	1/1:2,25:27:72.23:892,72,0	1/1:0,20:20:51.16:632,51,0	1/1:0,31:31:90.25:1080,90,0	1/1:0,23:23:69.22:855,69,0	1/1:1,27:28:81.24:992,81,0	1/1:0,20:20:57.11:687,57,0	1/1:0,27:27:66.21:818,66,0	1/1:1,21:22:51.16:632,51,0	0/0:20,0:20:57.19:0,57,817	1/1:1,28:29:78.25:966,78,0	1/1:0,25:25:60.19:744,60,0	0/0:38,0:38:99:0,111,1576	0/0:27,0:27:81.20:0,81,1136	1/1:3,17:20:51.12:596,51,0	1/1:0,21:21:63.14:762,63,0	1/1:0,30:30:84.26:1041,84,0	1/1:1,19:20:57.14:689,57,0	1/1:1,18:19:48.11:577,48,0	1/1:1,24:25:66.21:817,66,0	1/1:0,27:27:69.22:855,69,0	1/1:0,19:19:54.17:669,54,0	1/1:1,32:33:93.29:1152,93,0	1/1:1,7:8:21.07:260,21,0
chr10	78717675	.	GGA	G	171.08	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.567;DP=626;FS=13.249;HRun=0;HaplotypeScore=165.9319;InbreedingCoeff=0.6431;MQ=63.66;MQ0=22;MQRankSum=1.309;QD=10.06;ReadPosRankSum=-4.274;VQSLOD=1.8329;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:27.64:0,28,251	0/0:12,0:12:21.74:0,22,110	0/0:63,0:30:11.43:0,11,373	0/0:59,0:25:42.04:0,42,470	0/0:17,0:17:21.51:0,22,150	0/0:24,0:24:59.87:0,60,601	0/0:22,0:21:2.73:0,3,374	0/0:29,0:28:64.50:0,64,554	1/1:0,17:17:17.58:261,18,0	0/0:23,0:23:48.53:0,49,380	0/0:21,0:21:33.25:0,33,216	0/0:13,0:14:2.95:0,3,144	0/0:7,0:7:14.90:0,15,124	0/0:19,0:18:44.09:0,44,520	0/0:20,0:20:27.93:0,28,153	0/0:9,0:9:13.55:0,14,52	0/0:27,0:27:20.20:0,20,443	0/0:21,0:20:59.95:0,60,665	0/0:16,0:15:36.83:0,37,245	0/0:26,0:26:38.15:0,38,227	0/0:25,0:25:17.69:0,18,137	0/0:23,0:22:35.84:0,36,329	0/0:17,0:17:11.59:0,12,153	0/0:27,0:26:38.45:0,38,315	0/0:14,0:14:25.34:0,25,147	0/0:17,0:16:27.86:0,28,151	0/0:24,0:24:56.50:0,57,327	0/0:8,0:8:13.02:0,13,78
chr10	78717677	.	AGTGTGTGTGTGTGTGTGTGTGT	A	12595.96	PASS	AB=0.692;AC=27;AF=0.482;AN=56;BaseQRankSum=8.498;DP=646;FS=1.758;HRun=0;HaplotypeScore=310.4176;InbreedingCoeff=0.8463;MQ=61.12;MQ0=26;MQRankSum=-7.758;QD=49.01;ReadPosRankSum=1.080;VQSLOD=3.3821;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:26:21.07:0,21,1287	1/1:6,4:12:18.06:1006,18,0	0/0:58,0:24:3:0,3,28	0/0:56,0:22:12.51:0,13,251	1/1:12,3:16:9:349,9,0	0/0:25,0:26:51.18:0,51,4047	0/0:20,0:21:36.06:0,36,2253	1/1:20,8:27:24.01:310,24,0	0/0:18,0:17:17.96:0,18,1407	1/1:15,8:23:18.43:964,18,0	1/1:9,10:19:24.01:1214,24,0	0/0:17,0:17:18.06:0,18,1382	0/0:8,0:15:9.50:0,10,585	0/0:19,0:18:36.12:0,36,3088	1/1:10,10:19:24.08:1398,24,0	1/1:2,7:9:18.06:1048,18,0	0/0:25,0:28:39.11:0,39,2293	0/0:23,0:24:48.16:0,48,4237	1/1:10,5:14:15.03:722,15,0	1/1:13,11:26:26.43:1529,26,0	1/1:21,5:24:3.01:147,3,0	0/0:27,0:26:19.43:0,19,1599	0/0:20,0:20:12.77:0,13,1174	0/0:21,0:31:21.07:0,21,1296	1/1:6,7:14:18.06:1027,18,0	1/1:6,10:15:27.08:1160,27,0	1/1:15,8:24:27.09:1551,27,0	0/1:5,4:9:88.47:169,0,88
chr10	78719993	.	G	GAA	789.78	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-0.311;DP=663;FS=0.706;HRun=10;HaplotypeScore=163.1951;InbreedingCoeff=0.6412;MQ=71.83;MQ0=0;MQRankSum=-4.381;QD=20.25;ReadPosRankSum=-1.143;VQSLOD=0.8902;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:86.64:0,87,773	0/0:7,0:7:21.01:0,21,190	0/1:13,0:12:9.33:9,0,108	0/0:13,0:12:20.94:0,21,189	0/0:26,0:27:36.10:0,36,559	0/0:23,0:23:56.88:0,57,504	0/0:21,0:22:55.45:0,55,478	0/0:32,0:32:77.55:0,78,712	1/1:6,19:26:65.69:882,66,0	0/0:33,0:33:84.93:0,85,798	0/0:24,0:24:62.60:0,63,542	0/0:34,0:34:77.63:0,78,673	0/0:19,0:19:53.97:0,54,479	0/0:20,0:21:12.39:0,12,357	0/0:30,0:30:74.89:0,75,665	0/0:28,0:28:63.03:0,63,573	0/0:23,0:23:50.97:0,51,459	0/0:17,0:17:38.97:0,39,341	0/0:26,0:26:69.08:0,69,652	0/0:24,0:24:54.08:0,54,507	0/0:13,0:13:39.01:0,39,361	0/0:16,0:16:30.75:0,31,300	0/0:22,0:22:59.52:0,60,507	0/0:37,0:37:89.94:0,90,795	0/0:28,0:28:68.61:0,69,626	0/0:31,0:32:52.62:0,53,719	0/0:36,0:36:89.84:0,90,785	0/0:4,0:4:11.94:0,12,95
chr10	78720272	.	TA	T	1618.29	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.500;DP=773;FS=4.558;HRun=2;HaplotypeScore=119.9980;InbreedingCoeff=0.9452;MQ=83.17;MQ0=0;MQRankSum=-2.059;QD=34.43;ReadPosRankSum=1.885;VQSLOD=3.2682;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,46:47:99:1713,132,0	0/0:12,0:12:36.12:0,36,539	0/0:29,0:29:76.35:0,76,1087	0/0:24,0:24:63.21:0,63,906	0/0:26,0:24:66.22:0,66,988	0/0:34,0:34:99:0,99,1482	0/0:24,0:24:69.23:0,69,1015	0/0:31,0:31:93.29:0,93,1340	0/0:26,0:26:75.24:0,75,1100	0/0:34,0:34:99:0,99,1466	0/0:22,0:22:63.21:0,63,943	0/0:38,0:38:99:0,108,1581	0/0:27,0:27:78.26:0,78,1168	0/0:26,0:26:78.25:0,78,1149	0/0:37,0:37:99:0,99,1435	0/0:33,0:32:96.32:0,96,1419	0/0:32,0:32:96.33:0,96,1437	0/0:28,0:28:81.26:0,81,1191	0/0:21,0:21:63.19:0,63,921	0/0:23,0:23:69.23:0,69,1033	0/0:27,0:26:75.25:0,75,1124	0/0:26,0:26:69.17:0,69,1007	0/0:24,0:24:66.21:0,66,969	0/0:25,0:25:69.22:0,69,1014	0/0:31,0:30:84.24:0,84,1216	0/0:32,0:31:87.29:0,87,1303	0/0:31,0:31:90.19:0,90,1264	0/0:3,0:3:9.03:0,9,135
chr10	78721039	.	CCAAGA	C	2626.73	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.052;DP=824;FS=10.359;HRun=0;HaplotypeScore=147.5297;InbreedingCoeff=0.9988;MQ=80.82;MQ0=0;MQRankSum=-5.128;QD=42.37;ReadPosRankSum=-0.644;VQSLOD=3.2617;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,3690	0/0:14,0:14:42.14:0,42,1301	0/0:43,0:43:99:0,114,3213	0/0:34,0:34:87.16:0,87,2420	0/0:20,0:20:54.19:0,54,1674	1/1:1,32:33:90.31:1812,90,0	1/1:3,26:29:48.10:936,48,0	0/0:50,0:50:99:0,129,3789	0/0:35,0:35:99:0,105,3255	0/0:27,0:27:78.26:0,78,2349	0/0:12,0:12:33.11:0,33,1015	0/0:34,0:34:96.33:0,96,2952	0/0:28,0:28:81.28:0,81,2497	0/0:31,0:31:87.30:0,87,2697	0/0:28,0:26:81.28:0,81,2482	0/0:40,0:40:99:0,117,3532	0/0:30,0:30:87.30:0,87,2697	0/0:24,0:24:72.22:0,72,2161	0/0:19,0:19:57.20:0,57,1717	0/0:18,0:18:45.15:0,45,1357	0/0:51,0:51:99:0,150,4387	0/0:33,0:33:96.32:0,96,2906	0/0:23,0:23:69.24:0,69,2127	0/0:23,0:23:61.76:0,62,1858	0/0:26,0:24:69.24:0,69,2104	0/0:32,0:32:90.31:0,90,2731	0/0:36,0:36:99:0,102,3102	0/0:8,0:8:24.08:0,24,744
chr10	78721368	.	GC	G	1586.26	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.505;DP=732;FS=0.000;HRun=6;HaplotypeScore=70.6690;InbreedingCoeff=0.9989;MQ=77.81;MQ0=0;MQRankSum=-0.398;QD=26.89;ReadPosRankSum=1.582;VQSLOD=4.1379;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,1361	0/0:21,0:21:63.20:0,63,821	0/0:33,0:33:86.94:0,87,1076	0/0:25,0:25:53.65:0,54,650	0/0:24,0:24:72.14:0,72,910	1/1:0,31:31:87.22:935,87,0	1/1:3,25:28:72.18:773,72,0	0/0:27,0:27:75.24:0,75,974	0/0:23,0:23:69.22:0,69,907	0/0:18,0:18:54.17:0,54,697	0/0:22,0:22:63.19:0,63,812	0/0:34,0:34:93.30:0,93,1223	0/0:28,0:28:75.23:0,75,969	0/0:19,0:19:57.12:0,57,699	0/0:31,0:31:87.27:0,87,1124	0/0:31,0:31:87.27:0,87,1131	0/0:24,0:24:72.22:0,72,932	0/0:34,0:34:93.29:0,93,1205	0/0:19,0:19:48.15:0,48,617	0/0:27,0:27:69.21:0,69,892	0/0:24,0:24:56.84:0,57,827	0/0:32,0:32:90.28:0,90,1169	0/0:25,0:25:72.22:0,72,930	0/0:27,0:27:78.25:0,78,1020	0/0:26,0:26:78.24:0,78,1011	0/0:33,0:33:90.29:0,90,1182	0/0:20,0:18:54.17:0,54,696	0/0:8,0:8:24.08:0,24,312
chr10	78721578	.	GCA	G	19139.61	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=10.826;DP=889;FS=6.586;HRun=0;HaplotypeScore=175.0606;InbreedingCoeff=0.9993;MQ=60.77;MQ0=9;MQRankSum=0.309;QD=27.62;ReadPosRankSum=6.024;VQSLOD=5.5962;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,35:43:78.25:1004,78,0	1/1:0,12:12:30.10:386,30,0	0/0:52,0:34:72.24:0,72,1120	0/0:51,0:32:66.20:0,66,1019	1/1:2,21:23:51.17:656,51,0	1/1:2,13:15:30.10:386,30,0	1/1:7,28:35:60.19:772,60,0	1/1:9,30:39:90.29:1158,90,0	1/1:3,39:42:99:1313,102,0	1/1:4,25:29:75.24:965,75,0	1/1:1,15:16:27.09:347,27,0	1/1:6,31:37:72.23:926,72,0	1/1:6,24:30:60.19:772,60,0	0/0:39,2:41:30.35:0,30,1600	1/1:3,28:31:60.20:772,60,0	1/1:6,27:33:75.23:951,75,0	0/0:20,0:20:39.13:0,39,651	0/0:31,0:31:71.08:0,71,1266	1/1:7,21:28:57.13:678,57,0	1/1:3,21:24:36.12:463,36,0	1/1:7,58:65:99:1815,142,0	1/1:2,27:28:54.13:695,54,0	1/1:3,26:29:66.19:849,66,0	1/1:4,27:31:75.24:965,75,0	1/1:3,21:24:57.18:734,57,0	1/1:5,39:44:99:1455,117,0	1/1:3,19:22:48.16:618,48,0	1/1:1,11:12:36.12:459,36,0
chr10	78723457	.	TACAC	T	16689.37	PASS	AB=0.517;AC=44;AF=0.786;AN=56;BaseQRankSum=8.166;DP=692;FS=1.459;HRun=0;HaplotypeScore=147.3948;InbreedingCoeff=0.8294;MQ=60.64;MQ0=3;MQRankSum=-0.728;QD=27.96;ReadPosRankSum=3.120;VQSLOD=5.0646;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,37:42:75.26:1347,75,0	1/1:0,9:9:15.05:269,15,0	0/0:22,0:17:45.03:0,45,572	0/0:12,0:10:24.06:0,24,420	1/1:1,36:35:48.16:862,48,0	1/1:0,18:18:33.11:593,33,0	1/1:1,19:20:27.09:485,27,0	1/1:6,38:44:99:1670,114,0	1/1:6,25:31:30.10:537,30,0	1/1:4,32:36:96.21:1521,96,0	1/1:1,27:28:45.15:808,45,0	1/1:14,19:33:60.11:870,60,0	0/1:1,16:17:8.23:401,0,8	0/0:21,0:21:63.16:0,63,1398	1/1:1,17:18:30.10:539,30,0	1/1:1,26:27:48.16:862,48,0	0/0:25,0:25:72.16:0,72,1513	0/0:15,0:15:42.12:0,42,1030	1/1:3,10:11:30.04:412,30,0	1/1:2,30:32:54.18:970,54,0	1/1:6,28:35:51.17:916,51,0	1/1:6,17:21:15.01:235,15,0	1/1:1,23:21:17.95:267,18,0	0/1:1,25:27:0:0,0,0	1/1:0,33:33:63.22:1132,63,0	1/1:0,29:29:87.23:1455,87,0	1/1:2,14:16:26.93:485,27,0	1/1:1,4:5:3.01:54,3,0
chr10	78725485	.	TTCTCTCTCTCTCTCTCTC	T	320.01	PASS	AB=1.000;AC=14;AF=0.467;AN=30;BaseQRankSum=1.091;DP=244;FS=0.000;HRun=0;HaplotypeScore=103.1682;InbreedingCoeff=0.3112;MQ=71.23;MQ0=16;MQRankSum=1.303;QD=3.60;ReadPosRankSum=0.669;VQSLOD=1.7260;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:0.89:0,1,2	./.	0/0:15,0:10:3.01:0,3,53	0/0:19,0:8:0.89:0,1,2	./.	./.	0/0:5,0:4:3.01:0,3,49	1/1:22,0:24:1.36:4,1,0	./.	./.	./.	1/1:7,0:7:3.01:50,3,0	0/0:7,0:7:3.01:0,3,50	./.	./.	./.	0/0:6,0:10:9.01:0,9,274	0/1:13,0:12:0:0,0,0	./.	./.	1/1:4,0:4:1.25:3,1,0	1/1:7,0:6:3.01:50,3,0	./.	0/0:4,0:4:2.99:0,3,24	./.	0/1:11,0:10:17.18:17,0,31	1/1:11,0:11:6:151,6,0	1/1:10,0:8:6.01:146,6,0
chr10	78725571	.	T	TCACACACACA	3906.97	PASS	AB=1.000;AC=26;AF=0.650;AN=40;BaseQRankSum=0.267;DP=159;FS=3.817;HRun=0;HaplotypeScore=65.3720;InbreedingCoeff=0.4535;MQ=60.92;MQ0=5;MQRankSum=-4.679;QD=43.41;ReadPosRankSum=-1.115;VQSLOD=2.9476;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:1:0:0,0,0	./.	0/1:18,0:8:10.77:11,0,67	0/0:26,0:9:2.99:0,3,82	0/1:7,0:7:0:0,0,0	1/1:8,1:9:8.65:452,9,0	1/1:1,1:2:3.01:151,3,0	1/1:23,0:21:27.09:1143,27,0	./.	1/1:2,0:2:3.01:148,3,0	0/1:2,0:2:0.26:0,0,0	./.	1/1:2,0:3:8.99:283,9,0	0/0:3,0:3:9.03:0,9,274	1/1:1,0:1:3.01:151,3,0	./.	0/0:14,0:14:24.08:0,24,725	0/0:21,0:21:7.62:0,8,856	1/1:4,0:5:6.02:242,6,0	./.	./.	./.	0/1:1,0:1:0:0,0,0	./.	1/1:2,0:2:3.01:151,3,0	1/1:1,1:2:6.02:228,6,0	1/1:4,2:7:5.95:302,6,0	1/1:5,1:6:15.05:647,15,0
chr10	78726300	.	G	GTCCATCCATCCATCCA	5839.99	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=1.556;DP=710;FS=11.842;HRun=0;HaplotypeScore=295.4857;InbreedingCoeff=0.9090;MQ=71.94;MQ0=0;MQRankSum=-9.429;QD=32.81;ReadPosRankSum=-5.815;VQSLOD=1.7922;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:29,6:41:35.55:1566,36,0	0/0:11,0:11:24.08:0,24,967	0/0:30,0:25:4.36:0,4,415	0/0:31,0:28:19.73:0,20,648	0/0:35,0:35:75.22:0,75,2814	0/0:32,0:32:69.24:0,69,2792	0/0:17,0:17:42.14:0,42,1583	0/0:20,0:20:24.07:0,24,823	1/1:18,7:27:18.06:1163,18,0	0/0:31,0:31:78.27:0,78,3094	0/0:16,0:16:33.11:0,33,1421	1/1:20,5:28:27.09:1488,27,0	1/1:15,6:23:9.50:558,10,0	0/0:27,0:27:63.22:0,63,2499	0/0:29,0:29:55.42:0,55,1941	0/0:32,0:32:78.25:0,78,3147	0/0:26,0:26:51.16:0,51,1959	0/0:26,0:26:63.22:0,63,2389	0/0:22,0:22:33.11:0,33,1164	0/0:13,0:13:27.09:0,27,1078	0/0:36,0:36:75.23:0,75,2869	1/1:9,1:10:12.04:576,12,0	1/1:20,2:23:6.02:194,6,0	1/1:18,6:26:4.32:296,4,0	0/0:27,0:27:63.20:0,63,2478	0/0:20,0:20:42.14:0,42,1616	0/0:34,0:34:78.27:0,78,3183	0/0:17,0:17:26.97:0,27,1193
chr10	78727888	.	AT	A	5223.04	PASS	AB=0.906;AC=30;AF=0.536;AN=56;BaseQRankSum=13.431;DP=564;FS=5.028;HRun=10;HaplotypeScore=56.5437;InbreedingCoeff=0.8422;MQ=69.40;MQ0=0;MQRankSum=-1.083;QD=18.46;ReadPosRankSum=2.245;VQSLOD=5.7750;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,102,1111	1/1:1,12:13:29.84:260,30,0	0/1:9,1:10:8.94:9,0,171	0/0:10,0:10:23.99:0,24,240	1/1:1,19:20:50.96:443,51,0	0/0:28,0:28:66.01:0,66,711	0/0:19,0:19:51.12:0,51,548	1/1:4,15:19:44.98:391,45,0	0/0:18,0:18:48.11:0,48,515	1/1:0,18:20:55.03:448,55,0	1/1:1,10:11:23.99:208,24,0	0/0:22,0:22:54.05:0,54,573	0/0:12,1:13:1:0,1,231	0/0:30,0:30:77.22:0,77,860	1/1:1,19:20:44.99:391,45,0	1/1:1,15:16:41.99:365,42,0	0/0:27,1:28:49.11:0,49,751	0/0:34,0:34:90.18:0,90,964	1/1:4,11:15:32.93:274,33,0	1/1:1,16:17:44.84:369,45,0	1/1:3,15:18:44.99:391,45,0	0/0:20,0:20:60.15:0,60,649	0/0:19,0:19:54.14:0,54,587	0/1:25,3:28:5.97:6,0,625	1/1:1,21:22:53.98:469,54,0	1/1:2,24:26:71.97:621,72,0	1/1:2,20:23:56.02:475,56,0	1/1:1,4:5:12:104,12,0
chr10	78731500	.	GTC	G	703.78	PASS	AB=0.989;AC=17;AF=0.304;AN=56;BaseQRankSum=5.313;DP=557;FS=14.700;HRun=0;HaplotypeScore=185.4163;InbreedingCoeff=0.2137;MQ=57.60;MQ0=13;MQRankSum=-5.302;QD=2.51;ReadPosRankSum=-4.790;VQSLOD=0.3617;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,10:26:21.27:197,21,0	0/0:11,0:11:9.66:0,10,36	0/1:24,0:10:6.93:7,0,149	0/1:46,0:14:15.48:21,0,15	0/0:30,0:30:1.63:0,2,9	1/1:10,3:12:0.99:108,1,0	1/1:13,9:22:30.54:254,31,0	1/1:25,0:16:0.84:83,1,0	0/0:20,0:20:27.09:0,27,428	0/1:20,0:20:1.01:57,0,1	0/1:11,0:11:0.71:1,0,1	0/0:26,0:26:52.71:0,53,791	0/0:22,0:22:45.08:0,45,666	0/0:17,0:17:42.13:0,42,653	0/0:13,0:13:6.22:0,6,27	0/0:16,0:16:3.72:0,4,15	0/0:30,0:30:75.01:0,75,1145	0/0:25,0:24:42.09:0,42,656	0/1:8,1:9:25.89:26,0,43	0/1:25,0:25:1.20:37,0,1	0/0:11,0:10:0:0,0,0	0/0:21,0:20:36:0,36,571	0/1:15,0:12:36.23:36,0,171	0/1:24,0:23:0.65:1,0,318	0/0:18,0:18:0.57:0,1,26	0/1:20,0:19:24.46:24,0,47	0/0:11,0:11:6.69:0,7,43	0/0:6,0:6:0.97:0,1,6
chr10	78731502	.	C	CTG	3505.31	PASS	AB=0.879;AC=24;AF=0.429;AN=56;BaseQRankSum=2.700;DP=550;FS=2.661;HRun=0;HaplotypeScore=180.3675;InbreedingCoeff=0.4316;MQ=57.57;MQ0=13;MQRankSum=-5.245;QD=12.75;ReadPosRankSum=-1.820;VQSLOD=3.4214;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:25.67:0,26,149	1/1:7,4:11:2.50:235,2,0	0/1:24,0:9:10.94:11,0,161	0/0:41,0:13:4.97:0,5,53	1/1:18,11:29:17.23:259,17,0	0/1:14,0:13:2.24:2,0,30	0/1:22,0:22:7:7,0,55	0/1:23,3:17:25.78:167,0,26	0/0:20,0:20:39.03:0,39,469	1/1:12,7:19:35.84:525,36,0	1/1:8,3:11:17.88:214,18,0	0/0:26,0:26:58.44:0,58,747	0/0:22,0:22:32.68:0,33,582	0/0:17,0:17:48.11:0,48,647	0/1:9,5:14:1.12:139,0,1	0/1:15,3:18:0.62:176,0,1	0/0:30,0:30:80.71:0,81,1101	0/0:23,0:22:56.87:0,57,722	0/0:9,0:9:1.79:0,2,70	1/1:15,9:24:32.64:460,33,0	1/1:3,8:10:0.47:1,0,0	0/0:21,0:20:45.11:0,45,597	0/0:16,0:13:23.98:0,24,251	0/0:24,0:23:41.90:0,42,484	1/1:7,9:16:32.86:551,33,0	0/1:14,6:19:7.98:447,0,8	0/1:7,3:10:3.78:158,0,4	1/1:4,2:6:2.81:151,3,0
chr10	78731514	.	C	CCA	415.87	PASS	AB=0.942;AC=12;AF=0.214;AN=56;BaseQRankSum=5.195;DP=506;FS=8.357;HRun=0;HaplotypeScore=194.7217;InbreedingCoeff=-0.0084;MQ=65.20;MQ0=8;MQRankSum=-5.574;QD=2.57;ReadPosRankSum=0.040;VQSLOD=1.9805;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,4:23:59.60:60,0,83	0/0:11,0:11:3.10:0,3,118	0/0:34,0:17:34.29:0,34,462	0/0:50,0:23:16.91:0,17,356	0/0:27,0:27:11.18:0,11,68	0/1:10,3:12:0.94:1,0,117	0/1:13,6:19:42.76:154,0,43	1/1:14,0:11:5.60:145,6,0	0/0:17,0:17:30.10:0,30,468	0/1:17,0:17:77.16:77,0,158	0/0:6,0:6:0.18:0,0,13	0/0:28,0:28:57.16:0,57,865	0/0:22,0:22:45.14:0,45,693	0/0:18,0:18:46.47:0,46,726	0/0:13,0:13:6.69:0,7,54	0/1:15,0:15:8.63:9,0,54	0/0:29,0:29:78.24:0,78,1226	0/0:20,0:19:45:0,45,700	0/0:9,0:9:17.46:0,17,160	0/1:17,0:17:7.26:42,0,7	0/1:4,0:3:0:0,0,0	0/0:20,0:19:39.11:0,39,624	0/0:18,0:16:26.50:0,27,373	0/0:18,0:17:23.93:0,24,371	0/1:15,0:15:5.39:5,0,36	0/1:18,0:17:51.49:51,0,192	0/1:7,0:7:3.40:3,0,35	0/0:3,0:3:3.05:0,3,16
chr10	78731519	.	T	TCCTCTTCTC	11589.89	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=6.907;DP=502;FS=9.340;HRun=0;HaplotypeScore=209.0142;InbreedingCoeff=0.9381;MQ=69.39;MQ0=7;MQRankSum=-12.334;QD=50.61;ReadPosRankSum=-5.383;VQSLOD=2.2895;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,3:19:29.93:786,30,0	1/1:9,1:10:30.10:773,30,0	0/0:40,0:23:42.28:0,42,821	0/0:54,0:27:21.81:0,22,788	1/1:28,0:27:13.65:278,14,0	1/1:11,0:13:33.11:987,33,0	1/1:14,0:19:42.14:1377,42,0	1/1:12,1:11:30.10:1238,30,0	0/0:16,0:16:24.08:0,24,668	1/1:12,4:17:45.15:1320,45,0	1/1:13,0:13:12.13:163,12,0	0/0:27,0:27:44.42:0,44,1083	0/0:20,0:20:42.14:0,42,1123	0/0:15,0:15:39.08:0,39,1043	1/1:9,1:10:21.64:457,22,0	1/1:7,7:14:21.07:473,21,0	0/0:26,0:26:78.05:0,78,2072	0/0:21,0:20:41.89:0,42,1012	1/1:11,0:10:27.09:779,27,0	1/1:16,2:18:35.66:616,36,0	0/1:2,0:2:0:0,0,0	0/0:20,0:19:36.12:0,36,875	0/0:17,0:15:24.07:0,24,705	0/0:17,0:16:17.90:0,18,480	1/1:11,0:11:19.91:372,20,0	1/1:19,1:19:41.82:1479,42,0	1/1:6,0:6:18.06:382,18,0	1/1:3,0:3:3.01:110,3,0
chr10	78731533	.	CT	C	882.10	PASS	AB=0.924;AC=22;AF=0.407;AN=54;BaseQRankSum=4.091;DP=454;FS=2.011;HRun=2;HaplotypeScore=165.1047;InbreedingCoeff=0.4595;MQ=64.90;MQ0=7;MQRankSum=-7.504;QD=4.96;ReadPosRankSum=-2.782;VQSLOD=-0.4341;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:18.95:0,19,146	1/1:10,0:10:5.73:69,6,0	0/0:34,0:18:40.66:0,41,584	0/0:45,1:24:28.65:0,29,449	1/1:23,2:25:3.94:32,4,0	0/0:18,0:18:32.06:0,32,270	0/0:21,0:20:16.40:0,16,98	0/1:9,1:10:13.78:95,0,14	0/0:15,0:15:22.75:0,23,140	0/1:14,0:14:37.90:38,0,39	1/1:11,1:11:2.51:16,3,0	0/1:18,2:20:4.72:5,0,140	0/0:17,1:18:17.25:0,17,129	0/0:13,0:13:36.08:0,36,462	1/1:9,1:10:9.94:67,10,0	0/1:12,0:13:21.39:21,0,27	0/0:24,0:24:68.86:0,69,879	0/0:18,0:17:27.56:0,28,299	0/1:9,1:9:4.13:26,0,4	1/1:13,1:14:16.87:105,17,0	./.	0/0:17,0:16:21.68:0,22,133	0/0:18,1:17:21.36:0,21,133	0/0:16,0:15:17.22:0,17,103	1/1:12,0:12:5.10:35,5,0	1/1:5,12:16:35.18:458,35,0	0/1:7,0:8:21.60:22,0,22	1/1:1,1:2:6.02:77,6,0
chr10	78731542	.	CCCT	C	1597.04	PASS	AB=1.000;AC=23;AF=0.426;AN=54;BaseQRankSum=3.281;DP=424;FS=0.000;HRun=0;HaplotypeScore=144.1241;InbreedingCoeff=0.5467;MQ=59.77;MQ0=11;MQRankSum=-2.228;QD=8.11;ReadPosRankSum=4.491;VQSLOD=2.9656;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:12:8.84:0,9,59	0/0:7,0:7:5.94:0,6,45	0/0:30,0:16:29.73:0,30,605	0/0:34,0:18:35.48:0,35,509	1/1:23,0:20:0.10:1,0,0	0/0:17,0:17:0.50:0,0,64	1/1:15,0:14:5.16:25,5,0	0/1:7,0:6:6.77:7,0,87	1/1:0,12:12:6.02:95,6,0	0/1:12,0:12:2.83:3,0,155	0/0:11,0:10:3.31:0,3,21	1/1:5,15:19:20.35:331,20,0	1/1:1,20:20:30.10:476,30,0	0/0:11,0:11:27.08:0,27,523	1/1:11,0:10:1.38:5,1,0	0/0:18,0:18:16.69:0,17,147	0/0:26,0:26:67.72:0,68,1136	0/0:15,0:14:14.98:0,15,130	0/0:6,0:5:8.95:0,9,80	0/0:12,0:11:1.98:0,2,7	./.	1/1:3,13:15:17.19:270,17,0	1/1:5,16:19:14.06:212,14,0	1/1:0,15:15:8.34:142,8,0	0/0:12,0:12:4.32:0,4,23	0/1:22,0:21:63.42:171,0,63	0/0:11,0:11:17.59:0,18,188	1/1:2,0:2:5.83:33,6,0
chr10	78731543	.	CCT	C	523.89	PASS	AB=1.000;AC=20;AF=0.385;AN=52;BaseQRankSum=1.985;DP=500;FS=0.000;HRun=0;HaplotypeScore=158.2511;InbreedingCoeff=0.6224;MQ=55.86;MQ0=12;MQRankSum=-0.479;QD=2.63;ReadPosRankSum=4.081;VQSLOD=2.4380;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:23:2.10:9,2,0	./.	0/0:29,1:16:25.28:0,25,305	0/0:34,0:18:27.30:0,27,223	0/1:28,0:24:0.11:0,0,0	0/0:18,0:18:1.93:0,2,6	1/1:21,0:19:2.81:18,3,0	0/0:9,0:8:5.57:0,6,40	1/1:12,0:12:5.93:41,6,0	0/0:20,0:18:18.35:0,18,104	./.	1/1:16,4:19:20.80:147,21,0	1/1:20,1:20:29.66:201,30,0	0/0:11,0:11:27.03:0,27,373	1/1:14,0:10:2.80:7,3,0	0/0:24,0:21:2.40:0,2,18	0/0:27,0:27:23.30:0,23,658	0/0:17,0:16:5.15:0,5,39	0/0:9,0:8:7.46:0,7,47	0/0:14,0:13:1.77:0,2,6	0/0:5,0:4:0:0,0,0	1/1:15,0:14:17.74:117,18,0	1/1:19,1:19:11.78:81,12,0	1/1:15,0:14:8.90:61,9,0	0/0:17,0:16:0:0,0,0	0/0:28,0:25:20.83:0,21,147	0/0:17,0:16:16.93:0,17,91	0/1:5,0:5:3.88:4,0,14
chr10	78731544	.	CT	C	416.97	PASS	AB=0.947;AC=27;AF=0.482;AN=56;BaseQRankSum=2.293;DP=486;FS=1.451;HRun=1;HaplotypeScore=147.5120;InbreedingCoeff=0.5001;MQ=55.18;MQ0=16;MQRankSum=-1.372;QD=1.59;ReadPosRankSum=2.565;VQSLOD=-0.7126;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:23:3.02:0,3,15	0/0:6,0:6:2.95:0,3,20	0/0:29,0:15:39.88:0,40,437	0/0:34,0:18:24.73:0,25,341	0/1:21,0:17:0.14:0,0,0	0/1:9,5:14:1.24:28,0,1	1/1:12,7:17:10.31:85,10,0	0/0:12,0:10:21.26:0,21,137	1/1:12,0:12:5.68:29,6,0	0/0:19,0:17:31.10:0,31,222	1/1:12,0:11:0.47:1,0,0	1/1:21,0:19:20.44:104,20,0	1/1:22,0:21:11.96:123,12,0	0/0:12,0:12:30.03:0,30,363	1/1:15,0:9:2.80:7,3,0	0/0:23,0:20:10.10:0,10,64	0/0:28,0:28:63.13:0,63,746	0/1:18,0:16:11.59:12,0,24	0/1:7,0:6:11.10:11,0,52	0/0:12,0:11:1.79:0,2,8	1/1:5,0:4:1.25:3,1,0	1/1:16,0:14:16.02:76,16,0	1/1:20,0:18:11.68:58,12,0	1/1:15,0:14:8.99:44,9,0	1/1:16,0:15:0.89:2,1,0	0/1:29,0:26:3.60:4,0,146	0/0:18,0:17:22.78:0,23,147	0/0:5,0:5:0.54:0,1,18
chr10	78731552	.	C	CTGTGTGTGTG	4666.64	PASS	AB=0.988;AC=23;AF=0.411;AN=56;BaseQRankSum=8.739;DP=497;FS=3.512;HRun=0;HaplotypeScore=209.5298;InbreedingCoeff=0.2747;MQ=49.66;MQ0=15;MQRankSum=-7.767;QD=18.30;ReadPosRankSum=1.243;VQSLOD=4.1495;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:29:5.25:87,0,5	1/1:10,0:10:2.88:56,3,0	0/0:24,0:12:29.99:0,30,682	0/0:28,0:16:32.40:0,32,678	0/0:20,1:17:0:0,0,1	0/1:13,0:14:28.30:36,0,28	0/1:18,0:16:0.25:0,0,19	0/1:15,0:12:99:122,0,333	0/0:7,0:7:6.02:0,6,141	0/1:18,1:17:55.66:650,0,56	0/0:12,0:11:0:0,0,0	0/0:17,0:15:21.07:0,21,503	0/0:20,0:19:33.11:0,33,729	0/0:15,0:15:29.83:0,30,948	1/1:15,0:8:5.95:122,6,0	0/1:25,1:23:57.77:241,0,58	0/0:29,0:29:71.48:0,71,1910	0/0:23,0:21:10.85:0,11,244	1/1:6,0:5:1.24:140,1,0	1/1:11,0:10:3.01:31,3,0	1/1:7,0:6:1.03:29,1,0	0/0:16,0:14:2.29:0,2,372	0/0:17,0:16:12.51:0,13,337	0/0:13,0:12:9.50:0,10,237	1/1:15,2:15:3.01:74,3,0	0/1:35,0:31:37.88:1826,0,38	1/1:22,1:22:32.81:856,33,0	1/1:7,0:7:17.27:397,17,0
chr10	78731556	.	G	GTC	233.68	PASS	AB=0.976;AC=20;AF=0.370;AN=54;BaseQRankSum=6.007;DP=485;FS=5.652;HRun=0;HaplotypeScore=152.1440;InbreedingCoeff=0.3491;MQ=48.51;MQ0=14;MQRankSum=-4.131;QD=0.95;ReadPosRankSum=0.330;VQSLOD=2.2736;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,3:28:2.68:12,3,0	1/1:8,0:9:2.59:10,3,0	0/0:23,0:11:2.97:0,3,23	0/0:26,0:14:8.19:0,8,36	0/1:18,1:15:0:0,0,0	0/0:11,0:10:1.22:0,1,3	1/1:18,1:17:1.29:13,1,0	0/0:15,0:12:16.15:0,16,212	0/0:7,0:7:6.01:0,6,65	0/1:18,1:18:39.97:125,0,40	./.	0/0:18,0:16:20.61:0,21,208	0/0:18,0:17:8.78:0,9,273	0/0:15,0:15:26.95:0,27,309	1/1:13,2:8:0.89:2,1,0	1/1:24,2:23:0.47:1,0,0	0/0:31,0:31:55.94:0,56,646	0/1:26,0:24:3.98:4,0,219	0/0:5,1:5:5.26:0,5,30	1/1:11,0:10:4.12:20,4,0	0/1:7,0:6:0:0,0,0	0/0:13,0:12:15.05:0,15,185	0/0:15,0:15:11.83:0,12,150	0/0:12,0:11:8.94:0,9,113	0/0:18,0:16:0.26:0,0,1	0/1:35,0:31:59.42:59,0,187	0/1:20,1:20:2.85:79,0,3	1/1:6,1:7:8.49:43,8,0
chr10	78731562	.	C	CTG	593.84	PASS	AB=0.980;AC=21;AF=0.389;AN=54;BaseQRankSum=8.038;DP=503;FS=0.000;HRun=0;HaplotypeScore=151.9169;InbreedingCoeff=0.2346;MQ=40.07;MQ0=15;MQRankSum=-4.057;QD=2.19;ReadPosRankSum=1.470;VQSLOD=2.4017;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,6:28:3:31,3,0	1/1:7,0:7:2.68:13,3,0	0/0:16,0:5:8.97:0,9,89	0/0:18,0:8:7.87:0,8,110	0/1:16,0:14:0:0,0,0	1/1:9,0:8:2.87:15,3,0	1/1:20,0:18:4.25:37,4,0	0/1:17,0:14:10.25:10,0,296	0/0:15,0:15:11.75:0,12,109	0/1:21,0:19:51.97:171,0,52	./.	0/0:19,0:17:21.05:0,21,276	0/0:22,0:21:25.94:0,26,409	0/0:16,0:16:26.90:0,27,389	1/1:19,1:13:5.74:34,6,0	0/1:26,0:23:7.17:42,0,7	0/0:31,0:31:77.78:0,78,990	0/0:26,0:23:37.63:0,38,431	0/0:7,0:6:8.91:0,9,75	1/1:14,0:14:5.24:37,5,0	0/1:8,0:7:0:0,0,0	0/0:17,0:16:15.05:0,15,226	0/0:17,0:16:15.04:0,15,195	0/0:15,0:13:14.99:0,15,181	0/1:20,1:19:11.26:11,0,20	0/1:30,3:29:99:252,0,183	0/1:18,1:18:19.98:77,0,20	0/1:9,0:9:19.82:20,0,48
chr10	78731566	.	CTG	C	734.27	PASS	AB=0.935;AC=18;AF=0.321;AN=56;BaseQRankSum=0.752;DP=520;FS=35.166;HRun=0;HaplotypeScore=147.9067;InbreedingCoeff=0.0180;MQ=38.47;MQ0=17;MQRankSum=-0.356;QD=2.63;ReadPosRankSum=0.073;VQSLOD=1.4366;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,3:29:0.08:1,0,0	1/1:7,1:8:5.40:34,5,0	0/0:12,0:3:2.99:0,3,23	0/1:14,0:6:0.32:10,0,0	0/1:14,3:15:0.13:0,0,0	1/1:7,3:9:5.95:65,6,0	0/0:15,5:18:5.24:0,5,31	0/0:24,0:20:39.83:0,40,442	0/0:15,0:15:8.91:0,9,76	0/1:20,4:22:99:228,0,105	0/0:10,2:12:0:0,0,0	0/1:20,0:19:12.25:12,0,91	0/0:24,0:23:28.15:0,28,225	0/0:16,0:16:31.80:0,32,440	0/0:19,1:13:2.26:0,2,8	0/0:25,3:25:8.73:0,9,52	0/0:29,0:29:19.30:0,19,814	0/1:24,0:21:76.71:77,0,349	0/1:11,0:9:1.13:1,0,127	0/1:15,1:16:6.77:68,0,7	0/0:8,0:7:0:0,0,0	0/0:16,0:15:14.92:0,15,115	0/0:17,0:16:14.99:0,15,136	0/1:16,0:13:8.14:8,0,84	0/1:17,4:19:12.25:15,0,12	0/1:33,1:29:99:136,0,346	0/1:17,2:18:48.26:118,0,48	0/1:9,1:10:38.72:103,0,39
chr10	78731570	.	C	CTCTG	624.03	PASS	AB=0.974;AC=10;AF=0.185;AN=54;BaseQRankSum=2.508;DP=546;FS=17.902;HRun=0;HaplotypeScore=171.0969;InbreedingCoeff=-0.0089;MQ=37.02;MQ0=16;MQRankSum=-5.561;QD=3.03;ReadPosRankSum=-1.966;VQSLOD=1.2516;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:31:2.90:9,3,0	0/0:8,0:8:0.58:0,1,2	./.	0/0:13,0:4:2.60:0,3,10	0/0:20,0:18:1.63:0,2,5	0/0:10,0:9:0.08:0,0,20	0/1:21,0:19:7.54:8,0,22	0/1:29,0:25:99:186,0,334	0/0:16,0:16:5.11:0,5,77	0/1:27,1:26:87.53:245,0,88	0/0:12,0:12:0:0,0,0	0/0:23,0:21:23.15:0,23,163	0/0:24,0:23:18:0,18,242	0/0:18,0:18:32.74:0,33,550	0/0:20,1:14:1.97:0,2,6	0/0:28,0:25:4.59:0,5,17	0/0:30,0:30:52.14:0,52,1068	0/0:25,0:22:37.72:0,38,517	0/1:12,0:10:83.43:83,0,120	0/1:21,0:21:19.88:24,0,20	0/1:8,0:7:0:1,0,0	0/0:16,0:15:14.92:0,15,115	0/0:17,0:16:11.62:0,12,111	0/0:17,0:14:14.73:0,15,116	0/0:23,1:22:3.66:0,4,30	0/1:31,3:29:99:132,0,258	0/1:17,2:18:24.87:59,0,25	0/0:11,0:11:8.65:0,9,58
chr10	78731574	.	C	CTG	373.30	PASS	AB=0.939;AC=12;AF=0.222;AN=54;BaseQRankSum=2.132;DP=577;FS=10.690;HRun=0;HaplotypeScore=170.0766;InbreedingCoeff=-0.0677;MQ=37.15;MQ0=17;MQRankSum=-2.728;QD=1.64;ReadPosRankSum=2.490;VQSLOD=1.4992;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,3:33:1.92:0,2,7	0/0:8,0:9:2.52:0,3,19	./.	0/0:10,0:3:2.74:0,3,12	1/1:19,1:19:0.47:1,0,0	0/1:12,1:12:4.36:4,0,41	0/0:19,1:18:1.69:0,2,7	0/1:34,0:29:60.36:60,0,340	0/0:18,0:18:23.56:0,24,197	0/1:26,1:27:99:189,0,161	0/1:13,1:14:0:0,0,0	0/0:23,0:21:29.40:0,29,236	0/0:26,0:24:30.83:0,31,250	0/0:18,0:18:35.76:0,36,491	0/0:19,2:14:2.81:0,3,17	0/0:26,3:27:14.08:0,14,77	0/0:32,0:32:61.66:0,62,996	0/0:24,0:21:24.11:0,24,443	0/1:12,1:12:61.50:61,0,117	0/1:19,0:21:14.63:15,0,41	0/1:9,0:8:0:0,0,0	0/0:19,0:18:17.92:0,18,142	0/0:18,0:16:11.81:0,12,119	0/0:18,0:15:17.80:0,18,151	0/0:24,0:22:5.65:0,6,37	0/1:40,0:35:48.66:49,0,366	0/1:19,1:20:27.99:98,0,28	0/1:10,1:11:17.49:17,0,119
chr10	78731576	.	CTCTG	C	1306.50	PASS	AB=0.997;AC=32;AF=0.593;AN=54;BaseQRankSum=3.028;DP=581;FS=9.538;HRun=0;HaplotypeScore=168.2742;InbreedingCoeff=-0.0649;MQ=35.64;MQ0=18;MQRankSum=3.549;QD=2.74;ReadPosRankSum=-2.377;VQSLOD=1.7706;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:34:0.53:2,1,0	1/1:8,1:9:8.62:81,9,0	./.	0/0:7,0:1:2.90:0,3,16	1/1:22,0:20:2.40:28,2,0	1/1:13,0:12:11.33:63,11,0	0/1:20,0:18:7.75:8,0,16	0/0:36,0:30:49.55:0,50,337	0/1:18,0:18:23.64:24,0,125	0/1:29,1:28:92.45:92,0,177	1/1:14,1:15:2.42:11,2,0	0/1:23,0:21:1.15:156,0,1	0/1:25,0:23:31.19:139,0,31	0/0:18,0:18:31.63:0,32,349	1/1:20,1:14:2.92:17,3,0	1/1:29,2:28:19.40:107,19,0	0/0:31,0:31:19.31:0,19,623	0/1:24,0:21:70.17:70,0,161	0/1:14,0:12:21.55:22,0,145	0/1:22,0:22:11.12:49,0,11	0/0:9,0:8:0:0,0,1	1/1:19,0:18:23.90:189,24,0	0/1:18,0:16:13.16:61,0,13	1/1:15,0:13:5.99:58,6,0	1/1:26,0:24:3.18:40,3,0	0/1:41,0:36:99:125,0,237	0/1:22,0:21:39.34:39,0,90	0/1:11,0:11:13.35:83,0,13
chr10	78731580	.	GTC	G	271.86	PASS	AB=0.972;AC=17;AF=0.327;AN=52;BaseQRankSum=-3.116;DP=600;FS=10.182;HRun=0;HaplotypeScore=171.9181;InbreedingCoeff=0.3763;MQ=34.03;MQ0=20;MQRankSum=3.476;QD=1.18;ReadPosRankSum=-1.758;VQSLOD=1.9347;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:34:0.28:0,0,0	0/0:10,0:10:4.74:0,5,30	./.	./.	0/0:22,0:21:2.78:0,3,16	1/1:13,0:12:1.49:35,1,0	0/0:21,1:20:0.47:0,0,1	0/0:42,0:34:0:0,0,0	0/1:17,1:18:4.53:5,0,161	0/0:33,0:32:23.12:0,23,180	0/0:16,0:16:2.80:0,3,13	1/1:21,2:21:13.18:103,13,0	1/1:24,1:23:11.30:85,11,0	0/0:18,0:18:6.13:0,6,167	0/1:22,0:16:0:0,0,0	0/0:31,0:28:7.66:0,8,29	0/1:29,2:31:59:59,0,268	0/0:25,0:22:6.02:0,6,54	0/0:21,0:19:7.48:0,7,41	0/0:23,0:23:8.77:0,9,60	0/0:9,0:8:0:0,0,0	1/1:20,0:19:5.70:41,6,0	1/1:13,3:14:2.65:32,3,0	1/1:13,0:12:5.83:38,6,0	0/0:26,0:24:1.55:0,2,4	0/0:42,0:36:39.71:0,40,297	0/0:24,0:23:21.16:0,21,125	0/1:11,0:11:15.18:15,0,33
chr10	78735121	.	GA	G	14024.64	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=8.914;DP=701;FS=9.047;HRun=7;HaplotypeScore=74.5529;InbreedingCoeff=0.9769;MQ=88.71;MQ0=0;MQRankSum=-4.183;QD=24.87;ReadPosRankSum=3.474;VQSLOD=5.2973;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:87.20:886,87,0	1/1:2,7:9:18.04:183,18,0	0/0:27,2:29:7.23:0,7,624	0/0:23,0:23:59.81:0,60,693	1/1:1,17:18:45.05:447,45,0	1/1:3,21:24:33.18:447,33,0	1/1:5,26:31:69.15:704,69,0	1/1:2,23:25:69.07:673,69,0	1/1:3,20:23:60.13:612,60,0	1/1:4,21:25:63.13:637,63,0	1/1:1,7:8:21.04:214,21,0	1/1:5,28:33:78.16:793,78,0	1/1:4,26:30:69.15:703,69,0	0/0:28,0:28:78.23:0,78,948	1/1:1,38:39:96.22:979,96,0	1/1:2,24:26:69.16:704,69,0	0/0:32,0:32:87.20:0,87,1038	0/0:25,0:25:75.24:0,75,942	1/1:3,23:26:69.15:703,69,0	1/1:3,14:17:39.09:397,39,0	1/1:6,43:49:99:1163,114,0	1/1:3,19:22:57.13:580,57,0	1/1:1,14:15:30.06:306,30,0	1/1:3,34:37:99:1009,99,0	1/1:0,19:19:45.10:457,45,0	1/1:4,17:21:54.10:543,54,0	1/1:1,23:24:63.14:642,63,0	1/1:0,10:10:24.05:245,24,0
chr10	78735505	.	TACACACACACACACACACACAC	T	7446.35	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=8.636;DP=571;FS=16.674;HRun=0;HaplotypeScore=292.2219;InbreedingCoeff=0.9114;MQ=57.56;MQ0=6;MQRankSum=-7.783;QD=51.35;ReadPosRankSum=0.171;VQSLOD=2.2932;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:23.12:0,23,1196	0/0:4,0:8:9.03:0,9,598	1/1:12,0:5:0.47:1,0,0	./.	0/0:14,0:24:36.12:0,36,1846	0/0:13,0:15:21.07:0,21,1516	0/0:15,0:19:21.07:0,21,1211	0/0:17,0:15:9.02:0,9,206	1/1:7,7:15:18.06:1026,18,0	0/0:19,0:23:57.18:0,57,3107	0/0:13,0:14:27.09:0,27,1344	1/1:9,13:22:18.06:1047,18,0	1/1:12,12:24:24.08:1376,24,0	0/0:14,0:14:20.34:0,20,1744	0/0:16,0:24:21.07:0,21,805	0/0:20,0:28:24.08:0,24,1429	0/0:25,0:24:46.10:0,46,3729	0/0:23,0:27:44.18:0,44,3286	0/0:12,0:15:27.06:0,27,1374	0/0:12,0:21:24.53:0,25,1317	0/0:40,0:39:45.63:0,46,2453	1/1:12,18:31:27.98:1552,28,0	1/1:5,16:21:36.04:2095,36,0	1/1:10,9:19:6.02:349,6,0	0/0:11,0:17:15.04:0,15,770	0/0:23,0:27:44.51:0,45,2456	0/0:9,0:17:27.09:0,27,1497	0/0:8,0:9:27.09:0,27,1567
chr10	78737146	.	AAGAGAG	A	610.78	PASS	AC=20;AF=0.385;AN=52;BaseQRankSum=4.737;DP=561;FS=35.578;HRun=0;HaplotypeScore=118.8895;InbreedingCoeff=0.6557;MQ=60.23;MQ0=11;MQRankSum=-3.757;QD=3.32;ReadPosRankSum=-1.137;VQSLOD=0.2795;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:24:0,24,439	0/0:3,0:3:2.99:0,3,23	./.	./.	0/0:19,0:19:3.01:0,3,39	0/0:19,0:19:11.09:0,11,180	1/1:18,1:19:3.89:62,4,0	0/0:35,0:35:4.75:0,5,25	1/1:26,1:27:14.96:210,15,0	0/0:16,0:16:0.47:0,0,1	0/0:20,0:20:9.03:0,9,115	1/1:8,4:11:6.02:120,6,0	1/1:21,0:20:9.03:155,9,0	0/0:22,0:22:18.04:0,18,416	0/0:21,0:25:21.04:0,21,239	0/0:19,0:21:20.15:0,20,264	0/0:24,0:24:27.09:0,27,638	1/1:11,0:11:3.01:45,3,0	0/0:18,0:18:12.04:0,12,249	0/0:19,0:19:9.03:0,9,179	0/0:16,0:16:27.09:0,27,689	1/1:22,0:22:2.87:15,3,0	1/1:15,2:18:5.82:33,6,0	1/1:21,1:23:2.63:45,3,0	0/0:16,0:16:6.02:0,6,76	1/1:19,0:18:9.43:54,9,0	0/0:14,0:20:9.01:0,9,178	1/1:9,0:10:3.01:42,3,0
chr10	78740339	.	TTG	T	5113.73	PASS	AB=0.816;AC=28;AF=0.519;AN=54;BaseQRankSum=10.475;DP=899;FS=4.196;HRun=0;HaplotypeScore=120.0172;InbreedingCoeff=0.6451;MQ=60.66;MQ0=25;MQRankSum=1.947;QD=10.97;ReadPosRankSum=0.202;VQSLOD=4.1176;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,10:22:42.14:220,0,42	1/1:4,6:10:12.03:134,12,0	./.	0/0:59,0:20:2.99:0,3,24	1/1:7,13:23:21.72:232,22,0	0/0:39,0:38:30.40:0,30,716	0/0:28,0:29:28.54:0,29,644	1/1:24,11:34:32.75:315,33,0	0/0:36,2:39:37.39:0,37,934	1/1:21,19:40:59.55:610,60,0	1/1:7,15:21:38.97:411,39,0	0/1:33,3:36:33.47:33,0,651	0/0:39,0:39:30.33:0,30,852	0/0:29,0:29:53.63:0,54,764	1/1:16,13:30:24.77:426,25,0	1/1:12,18:32:49.76:519,50,0	0/0:37,1:38:6.23:0,6,877	0/1:18,4:24:88.65:89,0,374	1/1:14,5:19:18.04:196,18,0	1/1:15,22:40:77.42:766,77,0	1/1:20,19:40:41.78:438,42,0	0/0:25,0:24:14.10:0,14,564	0/0:18,0:18:18.37:0,18,376	0/0:41,3:43:21.37:0,21,1123	1/1:6,14:21:38.73:403,39,0	0/1:37,4:42:69.03:69,0,712	1/1:11,11:26:29.97:253,30,0	0/0:15,2:17:9.51:0,10,552
chr10	78740466	.	T	TTGG	1461.92	PASS	AB=0.827;AC=6;AF=0.107;AN=56;BaseQRankSum=3.657;DP=717;FS=9.399;HRun=0;HaplotypeScore=199.8129;InbreedingCoeff=-0.1293;MQ=56.67;MQ0=14;MQRankSum=-3.732;QD=10.99;ReadPosRankSum=1.197;VQSLOD=2.6501;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:47.48:0,47,1165	0/0:11,0:11:33.04:0,33,342	0/0:29,0:18:52.36:0,52,792	0/0:35,0:18:37.27:0,37,664	0/0:25,0:25:71.27:0,71,689	0/0:25,0:25:75.24:0,75,1202	0/0:33,0:33:93.27:0,93,1394	0/0:36,0:36:99:0,105,903	0/1:19,6:25:99:294,0,129	0/0:24,0:24:62.89:0,63,596	0/0:22,0:22:65.89:0,66,600	0/1:21,4:25:99:251,0,138	0/1:19,11:30:99:547,0,159	0/0:22,0:22:63.22:0,63,1105	0/0:22,0:22:62.40:0,62,530	0/0:22,0:22:60.14:0,60,612	0/0:48,0:48:99:0,125,2215	0/0:26,0:26:75.26:0,75,1300	0/0:29,0:29:83.96:0,84,830	0/0:21,0:20:59.55:0,60,553	0/0:28,0:28:43.13:0,43,436	0/1:10,1:11:44.26:101,0,44	0/1:13,6:19:78.56:299,0,79	0/1:20,3:23:93.54:94,0,156	0/0:20,0:20:45.01:0,45,461	0/0:36,0:36:99:0,105,1738	0/0:32,0:32:93.15:0,93,999	0/0:8,0:8:1.55:0,2,341
chr10	78740470	.	TTTGG	T	5557.08	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=2.691;DP=711;FS=0.382;HRun=0;HaplotypeScore=196.7443;InbreedingCoeff=0.7956;MQ=54.64;MQ0=14;MQRankSum=-5.761;QD=14.98;ReadPosRankSum=-2.682;VQSLOD=3.5941;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:39.46:39,0,618	1/1:13,0:13:30.01:384,30,0	0/0:29,0:18:11.58:0,12,74	0/0:38,0:19:14.69:0,15,128	1/1:24,0:24:41.86:484,42,0	0/1:23,0:23:1.80:2,0,602	0/1:31,0:31:82.05:82,0,579	1/1:34,0:34:32.89:268,33,0	0/0:23,0:23:30:0,30,433	1/1:25,0:25:48.04:602,48,0	1/1:22,0:22:30.02:383,30,0	0/0:23,0:23:38.94:0,39,443	0/0:32,0:32:60.13:0,60,895	0/0:21,0:21:39.08:0,39,842	1/1:20,0:20:23.93:303,24,0	1/1:23,0:23:42.04:571,42,0	0/0:50,0:50:99:0,108,1877	0/0:28,0:28:47.14:0,47,723	1/1:28,0:28:35.95:426,36,0	1/1:20,0:19:45.03:583,45,0	1/1:26,0:26:17.71:131,18,0	0/0:12,0:12:20.26:0,20,300	0/0:18,0:18:29.99:0,30,444	0/0:22,0:22:21.13:0,21,169	1/1:13,7:20:27.05:382,27,0	0/0:36,0:36:58.11:0,58,1323	1/1:32,0:32:69:915,69,0	0/0:8,0:8:9.03:0,9,194
chr10	78740476	.	TG	T	817.99	PASS	AB=0.730;AC=11;AF=0.196;AN=56;BaseQRankSum=11.436;DP=688;FS=2.198;HRun=2;HaplotypeScore=167.8005;InbreedingCoeff=-0.0764;MQ=53.43;MQ0=16;MQRankSum=-6.380;QD=3.84;ReadPosRankSum=5.119;VQSLOD=0.6970;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:39.04:0,39,334	0/1:3,8:11:14.16:56,0,14	0/0:27,0:16:39.12:0,39,527	0/0:39,1:19:27:0,27,591	0/1:15,10:25:77.63:78,0,109	0/0:22,0:22:59.98:0,60,348	0/0:28,0:28:71.17:0,71,436	0/0:33,0:33:30.11:0,30,289	0/0:23,0:23:54.10:0,54,648	0/1:16,8:24:59.74:140,0,60	0/1:14,5:19:51.73:52,0,89	0/0:23,0:23:66.14:0,66,869	0/0:32,0:32:96.22:0,96,1205	0/0:21,0:21:63.20:0,63,910	0/1:11,5:15:56.11:56,0,78	0/1:14,9:23:98.86:104,0,99	0/0:48,0:48:99:0,135,1948	0/0:27,0:27:81.16:0,81,1116	0/1:22,4:26:99:110,0,147	1/1:10,8:17:3.13:125,3,0	0/0:26,0:26:11.67:0,12,256	0/0:12,0:12:36.10:0,36,491	0/0:18,0:18:54.10:0,54,645	0/0:23,0:23:57.07:0,57,704	0/1:13,8:21:50.85:54,0,51	0/0:36,0:36:99:0,105,1507	0/1:15,14:30:60.66:191,0,61	0/0:5,0:5:15.05:0,15,216
chr10	78740479	.	TTGG	T	2173.50	PASS	AB=0.813;AC=15;AF=0.268;AN=56;BaseQRankSum=10.847;DP=695;FS=5.711;HRun=0;HaplotypeScore=187.1418;InbreedingCoeff=0.1711;MQ=52.28;MQ0=20;MQRankSum=-6.327;QD=7.88;ReadPosRankSum=5.213;VQSLOD=2.6515;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:4.37:4,0,377	1/1:3,8:11:11.78:177,12,0	0/0:26,0:13:30.07:0,30,412	0/0:45,0:21:39.31:0,39,702	0/1:14,10:24:52.88:193,0,53	0/0:25,0:25:72.49:0,72,1135	0/0:30,0:30:80.32:0,80,1093	0/1:35,0:35:30.78:31,0,158	0/0:22,0:22:51.16:0,51,817	0/1:16,8:24:8.75:286,0,9	0/1:14,5:19:61.85:157,0,62	0/0:23,0:23:66.17:0,66,1044	0/0:33,0:33:99:0,99,1602	0/0:21,0:21:63.21:0,63,1239	0/1:11,5:15:38.62:124,0,39	0/1:14,9:23:49.20:282,0,49	0/0:47,0:47:99:0,135,2742	0/0:27,0:27:78.25:0,78,1378	0/1:21,4:24:94.74:178,0,95	1/1:11,8:18:27.90:324,28,0	0/0:26,0:26:14.61:0,15,186	0/0:13,0:13:39.13:0,39,676	0/0:17,0:17:48.16:0,48,782	0/0:22,0:22:50.18:0,50,730	0/1:13,8:21:6.86:163,0,7	0/0:37,0:37:99:0,108,2096	1/1:15,14:29:2.12:421,2,0	0/0:5,0:5:12.93:0,13,251
chr10	78740495	.	T	TTGGT	4072.66	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=-2.265;DP=708;FS=15.068;HRun=0;HaplotypeScore=181.6821;InbreedingCoeff=0.2334;MQ=55.80;MQ0=18;MQRankSum=-2.596;QD=10.26;ReadPosRankSum=-2.411;VQSLOD=1.5858;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:54.18:0,54,742	0/1:14,0:14:12.94:13,0,94	0/0:42,0:25:5.24:0,5,47	0/0:47,0:25:3:0,3,27	0/1:24,0:24:99:105,0,117	0/0:22,0:22:48.14:0,48,713	0/0:31,0:31:54.98:0,55,718	1/1:26,0:26:23.70:175,24,0	1/1:19,5:25:29.29:563,29,0	0/1:25,0:25:99:108,0,125	0/1:21,0:21:35.44:35,0,85	1/1:21,0:21:35.59:485,36,0	1/1:29,0:29:65.44:1104,65,0	0/0:22,0:22:33.11:0,33,525	0/1:15,0:14:40.23:40,0,89	0/1:24,0:24:51.27:51,0,174	0/0:45,0:45:98.93:0,99,1228	0/0:24,0:24:35.85:0,36,415	0/1:17,0:16:76.36:118,0,76	0/1:23,0:22:55.83:56,0,147	1/1:17,0:17:11.80:79,12,0	1/1:19,0:19:23.88:283,24,0	1/1:17,0:17:32.29:583,32,0	1/1:21,0:21:20.89:208,21,0	0/1:25,0:25:23.48:23,0,125	0/0:37,0:37:66.12:0,66,877	0/1:34,0:34:43.46:43,0,326	0/0:8,0:8:9.03:0,9,136
chr10	78740634	.	TA	T	2458.41	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.813;DP=526;FS=3.075;HRun=1;HaplotypeScore=51.0920;InbreedingCoeff=0.9971;MQ=69.16;MQ0=0;MQRankSum=-0.851;QD=37.25;ReadPosRankSum=1.443;VQSLOD=4.0036;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:84.28:1175,84,0	0/0:8,0:8:21.07:0,21,336	0/0:22,0:21:29.29:0,29,883	0/0:18,0:17:44.76:0,45,615	0/0:25,0:25:72.25:0,72,1151	1/1:0,23:23:66.22:923,66,0	1/1:0,13:13:36.12:503,36,0	0/0:27,0:27:78.26:0,78,1220	0/0:9,0:9:27.09:0,27,432	0/0:17,0:17:51.17:0,51,795	0/0:24,0:24:72.23:0,72,1123	0/0:21,0:21:63.21:0,63,1002	0/0:18,0:18:54.18:0,54,859	0/0:14,0:14:42.14:0,42,672	0/0:10,0:10:30.10:0,30,479	0/0:12,0:12:36.11:0,36,551	0/0:23,0:22:69.20:0,69,1076	0/0:16,0:16:48.16:0,48,767	0/0:19,0:19:57.18:0,57,872	0/0:30,0:30:87.28:0,87,1368	0/0:15,0:15:45.15:0,45,720	0/0:9,0:9:27.08:0,27,407	0/0:22,0:22:60.20:0,60,959	0/0:10,0:10:30.06:0,30,451	0/0:21,0:21:63.21:0,63,1007	0/0:26,0:26:78.24:0,78,1201	0/0:30,0:30:81.28:0,81,1289	0/0:14,0:14:42.14:0,42,671
chr10	78740777	.	C	CA	7678.96	PASS	AB=0.957;AC=26;AF=0.464;AN=56;BaseQRankSum=-8.181;DP=579;FS=1.898;HRun=7;HaplotypeScore=56.6489;InbreedingCoeff=0.8497;MQ=64.71;MQ0=0;MQRankSum=-1.815;QD=26.48;ReadPosRankSum=-1.684;VQSLOD=4.8837;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:60.08:0,60,577	1/1:1,9:10:27.08:322,27,0	0/1:10,0:9:14.56:15,0,50	0/0:18,0:13:8.32:0,8,107	1/1:1,22:23:54.16:648,54,0	0/0:23,0:24:68.11:0,68,632	0/0:19,0:19:54.09:0,54,521	1/1:3,32:35:96.29:1155,96,0	0/0:18,0:18:51.06:0,51,486	1/1:4,20:24:54.13:636,54,0	1/1:2,30:32:78.15:897,78,0	0/0:20,0:20:57.09:0,57,550	0/0:13,0:13:39.06:0,39,377	0/0:20,0:20:57.09:0,57,550	1/1:3,21:23:60.18:725,60,0	1/1:1,19:20:45.14:544,45,0	0/0:31,0:31:81.12:0,81,782	0/0:14,0:14:42.07:0,42,405	1/1:2,15:16:45.12:530,45,0	1/1:3,26:29:75.19:881,75,0	1/1:1,9:10:27.08:326,27,0	0/0:19,0:19:54.07:0,54,516	0/0:23,0:23:63.08:0,63,603	0/0:32,0:32:78.11:0,78,753	1/1:1,14:15:33.10:399,33,0	0/1:19,2:21:21.41:21,0,378	1/1:1,19:20:47.98:579,48,0	0/0:9,0:9:27.04:0,27,261
chr10	78741076	.	CCAACATGG	C	18750.82	PASS	AB=0.716;AC=24;AF=0.429;AN=56;BaseQRankSum=19.307;DP=754;FS=12.397;HRun=0;HaplotypeScore=207.1569;InbreedingCoeff=0.8471;MQ=87.13;MQ0=1;MQRankSum=-19.663;QD=57.87;ReadPosRankSum=4.086;VQSLOD=3.6579;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,4677	1/1:0,21:21:51.14:1535,51,0	0/0:37,0:37:99:0,110,4065	0/0:26,0:26:75.21:0,75,2800	1/1:0,21:22:30.10:902,30,0	0/0:33,0:33:99:0,99,4119	0/0:28,0:28:84.28:0,84,3724	1/1:0,21:21:60.12:1639,60,0	0/0:24,0:24:72.25:0,72,3175	1/1:0,40:40:99:2861,111,0	1/1:0,25:25:43.03:1264,43,0	0/0:27,0:27:81.28:0,81,3589	0/0:42,0:42:99:0,126,5609	0/0:34,0:34:99:0,102,4520	1/1:0,42:42:99:3309,111,0	0/1:1,28:29:69.71:1916,0,70	0/0:24,0:24:72.24:0,72,3048	0/0:18,0:18:54.16:0,54,2277	1/1:2,12:14:35.81:798,36,0	1/1:1,26:26:39.13:1172,39,0	1/1:0,17:17:9.88:272,10,0	0/0:28,0:28:81.28:0,81,3668	0/0:28,0:28:62.91:0,63,2803	0/0:29,0:29:87.28:0,87,3781	1/1:0,24:24:54.19:1624,54,0	0/1:22,2:24:99:108,0,2812	1/1:0,18:18:45.15:1351,45,0	0/0:14,0:14:42.14:0,42,1738
chr10	78741175	.	GAAGA	G	1449.57	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.042;DP=752;FS=3.634;HRun=0;HaplotypeScore=142.0706;InbreedingCoeff=0.9994;MQ=89.84;MQ0=1;MQRankSum=-4.208;QD=43.93;ReadPosRankSum=1.658;VQSLOD=4.0546;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:75.26:1544,75,0	0/0:11,0:11:30.10:0,30,854	0/0:36,0:36:99:0,102,2629	0/0:30,0:30:38.45:0,38,1621	0/0:28,0:28:84.14:0,84,2216	0/0:31,0:31:93.32:0,93,2658	0/0:25,0:25:75.26:0,75,2138	0/0:30,0:30:90.30:0,90,2426	0/0:25,0:25:68.02:0,68,438	0/0:30,0:30:90.30:0,90,2476	0/0:28,0:28:81.28:0,81,2307	0/0:18,0:18:50.34:0,50,337	0/0:23,0:23:61.77:0,62,417	0/0:30,0:30:87.30:0,87,2506	0/0:38,0:38:99:0,114,3281	0/0:31,0:31:84.23:0,84,2365	0/0:15,0:15:45.15:0,45,1302	0/0:17,0:17:51.17:0,51,1419	0/0:28,0:28:84.27:0,84,2321	0/0:24,0:24:72.25:0,72,2054	0/0:28,0:28:84.20:0,84,2299	0/0:29,0:29:82.82:0,83,537	0/0:23,0:23:56.17:0,56,360	0/0:36,0:35:91.69:0,92,617	0/0:17,0:17:45.15:0,45,1304	0/0:32,0:32:96.33:0,96,2779	0/0:37,0:37:99:0,108,3097	0/0:18,0:18:51.18:0,51,1463
chr10	78741176	.	AAG	A	5841.42	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.967;DP=753;FS=1.449;HRun=0;HaplotypeScore=96.6401;InbreedingCoeff=0.9999;MQ=88.89;MQ0=1;MQRankSum=-3.730;QD=31.58;ReadPosRankSum=4.756;VQSLOD=6.9124;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:68.27:339,68,0	0/0:12,0:12:33.11:0,33,573	0/0:36,0:36:90.28:0,90,1550	0/0:29,0:28:60.16:0,60,937	0/0:29,0:29:78.27:0,78,1388	0/0:31,0:31:90.31:0,90,1621	0/0:25,0:25:72.25:0,72,1297	0/0:31,0:31:81.28:0,81,1439	1/1:1,23:24:63.21:882,63,0	0/0:30,0:30:84.28:0,84,1485	0/0:28,0:28:81.28:0,81,1431	1/1:2,16:18:45.15:630,45,0	1/1:1,22:23:60.20:840,60,0	0/0:30,0:30:87.30:0,87,1561	0/0:39,0:39:99:0,117,2072	0/0:30,1:31:42.26:0,42,1416	0/0:15,0:15:45.15:0,45,810	0/0:17,0:17:48.16:0,48,858	0/0:29,0:29:84.28:0,84,1450	0/0:24,0:24:72.25:0,72,1290	0/0:28,0:28:78.27:0,78,1404	1/1:1,27:28:81.27:1133,81,0	1/1:0,23:23:54.18:756,54,0	1/1:1,35:35:90.30:1260,90,0	0/0:16,0:16:45.15:0,45,811	0/0:32,0:32:96.33:0,96,1729	0/0:38,0:38:99:0,111,1970	0/0:18,0:18:51.17:0,51,909
chr10	78742080	.	GGT	G	1784.38	PASS	AB=1.000;AC=18;AF=0.360;AN=50;BaseQRankSum=11.437;DP=321;FS=18.782;HRun=0;HaplotypeScore=63.3910;InbreedingCoeff=0.7517;MQ=77.03;MQ0=0;MQRankSum=-2.645;QD=11.29;ReadPosRankSum=5.152;VQSLOD=1.6564;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,1:23:26.36:283,26,0	0/1:1,0:1:0:0,0,0	0/0:9,0:9:17.20:0,17,231	0/0:17,0:15:2.89:0,3,220	0/0:5,0:5:2.70:0,3,50	1/1:15,1:16:28.84:158,29,0	1/1:32,1:33:64.94:445,65,0	0/0:7,0:7:14.04:0,14,246	1/1:22,0:22:21.78:252,22,0	0/0:7,0:7:13.85:0,14,200	0/0:3,0:3:3.01:0,3,47	1/1:17,0:17:38.99:254,39,0	1/1:13,1:14:21.25:205,21,0	0/0:6,0:6:17.98:0,18,253	0/0:10,0:10:23.99:0,24,312	0/0:12,0:12:33.99:0,34,508	0/0:28,0:28:75.12:0,75,1111	0/0:18,0:18:45.50:0,45,593	0/0:5,0:5:5.63:0,6,97	./.	0/0:17,0:17:32.68:0,33,411	1/1:3,0:3:5.68:28,6,0	0/1:7,0:7:15.44:37,0,15	1/1:19,3:22:41.11:307,41,0	./.	0/0:7,0:7:18.05:0,18,248	0/0:6,0:6:15.03:0,15,211	./.
chr10	78742082	.	TGG	T	4065.78	PASS	AB=0.944;AC=19;AF=0.380;AN=50;BaseQRankSum=10.268;DP=313;FS=36.905;HRun=6;HaplotypeScore=55.1811;InbreedingCoeff=0.7884;MQ=77.50;MQ0=0;MQRankSum=-4.266;QD=23.92;ReadPosRankSum=4.896;VQSLOD=0.3359;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,17:22:50.70:599,51,0	0/0:1,0:1:2.98:0,3,21	0/0:9,0:9:16.05:0,16,307	0/1:16,0:15:15.38:15,0,284	0/0:5,0:5:2.70:0,3,54	1/1:1,15:16:30.02:372,30,0	1/1:1,32:33:69.16:844,69,0	0/0:8,0:8:15.03:0,15,237	1/1:4,15:19:45.14:578,45,0	0/0:6,0:6:15.05:0,15,248	0/0:3,0:3:3.01:0,3,54	1/1:2,14:17:42.09:506,42,0	1/1:3,11:14:33.10:422,33,0	0/0:7,0:7:21.04:0,21,333	0/0:9,0:9:21.07:0,21,364	0/0:12,0:12:36.11:0,36,614	0/0:26,0:26:66.18:0,66,1130	0/0:17,0:17:48.13:0,48,764	0/0:5,0:5:7.87:0,8,115	./.	0/0:15,0:15:29.38:0,29,449	1/1:0,3:3:6.02:78,6,0	1/1:1,6:7:11.77:128,12,0	1/1:3,19:22:42.07:524,42,0	./.	0/0:8,0:8:18.05:0,18,294	0/0:6,0:6:15.05:0,15,260	./.
chr10	78744217	.	AGTGTGTGTGTGTGTGT	A	8170.97	PASS	AB=0.683;AC=29;AF=0.518;AN=56;BaseQRankSum=7.629;DP=736;FS=0.514;HRun=0;HaplotypeScore=269.5512;InbreedingCoeff=0.4276;MQ=53.21;MQ0=13;MQRankSum=-4.588;QD=16.81;ReadPosRankSum=3.229;VQSLOD=3.4861;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:31:15.05:0,15,841	0/1:4,0:12:42.43:66,0,42	0/0:17,0:4:0:0,0,0	0/0:29,0:17:0.89:0,1,2	1/1:6,16:22:12.04:489,12,0	0/0:16,0:21:19.06:0,19,652	0/0:18,0:30:26.78:0,27,830	0/1:27,9:36:64.18:279,0,64	1/1:5,2:19:21.07:562,21,0	1/1:15,16:30:34.63:780,35,0	1/1:11,12:24:12.04:509,12,0	1/1:15,0:27:5.81:143,6,0	0/1:12,0:27:20.71:312,0,21	0/0:16,0:17:15.05:0,15,585	1/1:15,16:31:15.94:665,16,0	0/1:12,14:27:18.65:755,0,19	0/0:30,0:28:57.20:0,57,3053	0/0:23,0:35:69.20:0,69,2471	0/1:13,6:16:1.66:386,0,2	1/1:11,23:33:24.08:1063,24,0	0/1:29,21:50:16.99:127,0,17	0/1:11,0:26:17.41:385,0,17	1/1:5,0:13:12.04:253,12,0	1/1:16,0:28:7.22:95,7,0	1/1:12,15:28:15.05:642,15,0	0/0:24,0:23:54.14:0,54,1960	1/1:11,20:31:14.08:663,14,0	0/0:11,0:10:24.07:0,24,952
chr10	78745721	.	C	CA	353.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.786;DP=610;FS=0.000;HRun=10;HaplotypeScore=72.8281;InbreedingCoeff=0.7977;MQ=72.76;MQ0=0;MQRankSum=-1.677;QD=16.85;ReadPosRankSum=0.706;VQSLOD=4.0150;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:21:48.56:449,49,0	0/0:9,0:9:23.97:0,24,197	0/0:18,0:15:3.20:0,3,132	0/0:11,0:10:8.81:0,9,62	0/0:18,0:18:41.94:0,42,345	0/0:28,2:30:43.04:0,43,559	0/0:18,0:18:47.86:0,48,382	0/0:40,0:40:99:0,102,834	0/0:23,0:23:41.71:0,42,489	0/0:24,2:26:34.06:0,34,485	0/0:20,0:20:50.92:0,51,419	0/0:16,0:16:47.92:0,48,389	0/0:28,0:28:65.82:0,66,534	0/0:22,0:22:59.91:0,60,492	0/0:38,1:39:72.84:0,73,798	0/0:24,0:24:59.89:0,60,491	0/0:25,0:25:48.75:0,49,444	0/0:14,0:14:32.96:0,33,271	0/0:21,0:23:50.36:0,50,394	0/0:30,0:30:77.89:0,78,640	0/0:10,0:10:26.97:0,27,221	0/0:25,0:25:41.71:0,42,490	0/0:20,0:21:30.29:0,30,354	0/0:11,0:11:17.96:0,18,148	0/0:22,0:22:59.93:0,60,493	0/0:26,0:26:68.88:0,69,562	0/0:34,0:34:72.77:0,73,758	0/0:6,0:6:17.98:0,18,148
chr10	78745746	.	GA	G	2764.40	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.615;DP=608;FS=1.296;HRun=8;HaplotypeScore=62.7585;InbreedingCoeff=0.9777;MQ=73.49;MQ0=0;MQRankSum=0.172;QD=21.77;ReadPosRankSum=1.968;VQSLOD=4.1838;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:47.46:0,47,536	0/0:9,0:9:27.07:0,27,315	0/0:20,0:18:24.47:0,24,369	0/0:9,0:8:7.89:0,8,106	0/0:24,0:24:66.18:0,66,775	0/0:26,0:26:75.23:0,75,899	0/0:19,0:19:51.16:0,51,616	0/0:42,0:42:99:0,114,1314	1/1:2,20:22:54.08:520,54,0	0/0:28,0:28:66.20:0,66,788	0/0:19,0:19:45.14:0,45,543	1/1:1,15:16:42.07:406,42,0	1/1:3,26:29:66.10:637,66,0	0/0:22,0:22:51.15:0,51,606	0/0:31,0:31:87.13:0,87,1029	0/0:23,0:23:60.18:0,60,725	0/0:23,0:23:60.16:0,60,705	0/0:16,0:16:48.15:0,48,577	0/0:22,0:22:60.18:0,60,723	0/0:23,0:23:60.17:0,60,713	0/0:14,0:14:39.12:0,39,470	1/1:1,26:27:69.10:665,69,0	1/1:1,19:20:54:521,54,0	1/1:0,13:13:21.03:203,21,0	0/0:25,0:25:60.16:0,60,702	0/0:28,0:28:78.23:0,78,933	0/0:31,0:31:78.22:0,78,925	0/0:5,0:5:12.04:0,12,145
chr10	78746706	.	A	AC	943.44	PASS	AB=0.924;AC=17;AF=0.304;AN=56;BaseQRankSum=-2.247;DP=481;FS=0.000;HRun=10;HaplotypeScore=80.2660;InbreedingCoeff=0.4078;MQ=78.09;MQ0=3;MQRankSum=-1.722;QD=5.49;ReadPosRankSum=-0.607;VQSLOD=1.2297;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:51.97:0,52,379	0/1:7,0:7:5.68:6,0,58	0/0:38,0:20:18.68:0,19,132	0/1:21,0:13:12.35:12,0,18	0/0:14,0:14:16.95:0,17,131	0/0:13,0:14:28.96:0,29,224	0/0:23,0:23:56.86:0,57,460	0/0:16,1:18:26.13:0,26,195	1/1:11,0:11:22.34:136,22,0	0/0:11,0:11:20.86:0,21,157	0/0:11,0:12:22.27:0,22,146	1/1:20,0:20:10.02:148,10,0	1/1:9,1:10:16.74:118,17,0	0/1:20,0:20:28.17:28,0,246	0/0:19,0:19:41.61:0,42,311	0/0:20,0:21:37.59:0,38,265	0/0:26,0:26:46.39:0,46,511	0/1:10,11:21:99:240,0,114	0/0:17,0:17:38.31:0,38,283	0/0:15,0:15:31.29:0,31,233	0/0:13,0:12:8.94:0,9,70	0/1:11,0:11:30.75:36,0,31	0/1:8,1:9:5.84:80,0,6	1/1:22,0:22:14.86:251,15,0	0/0:17,0:17:17.67:0,18,125	0/1:9,0:10:9.23:52,0,9	0/0:21,0:21:47.74:0,48,363	1/1:10,0:10:4.99:18,5,0
chr10	78746723	.	TTA	T	1467.47	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=2.543;DP=517;FS=5.175;HRun=0;HaplotypeScore=97.9446;InbreedingCoeff=0.2336;MQ=88.90;MQ0=3;MQRankSum=-0.689;QD=5.71;ReadPosRankSum=2.661;VQSLOD=2.3789;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:45.12:644,45,0	0/1:6,0:6:0.58:14,0,1	0/0:58,0:33:78.61:0,79,1094	0/0:30,0:20:50.78:0,51,678	0/1:18,0:18:25.07:61,0,25	0/0:17,0:17:51.10:0,51,772	0/0:22,0:22:66.23:0,66,1182	1/1:19,0:19:11.68:172,12,0	0/0:8,0:8:3.88:0,4,37	1/1:18,0:18:35.12:199,35,0	1/1:9,0:9:5.16:63,5,0	0/1:14,0:14:45.29:45,0,63	0/1:9,0:9:8.14:8,0,52	0/0:24,0:24:69.50:0,70,1057	0/1:17,0:17:0.33:0,0,42	0/1:22,0:22:40.43:40,0,66	0/0:30,0:30:89.61:0,90,1475	0/0:25,0:25:72.17:0,72,1207	1/1:19,0:19:22.16:184,22,0	0/1:22,0:22:17.02:121,0,17	1/1:9,0:9:4.84:15,5,0	0/1:12,0:12:45.57:46,0,46	0/1:16,0:16:23.10:25,0,23	0/0:15,0:15:0.54:0,1,85	0/0:13,0:13:4.68:0,5,59	0/0:13,0:13:35.11:0,35,473	0/1:21,0:21:7.52:8,0,12	0/0:5,0:5:15.03:0,15,193
chr10	78746724	.	TA	T	6087.98	PASS	AB=0.929;AC=39;AF=0.696;AN=56;BaseQRankSum=-2.526;DP=517;FS=16.403;HRun=3;HaplotypeScore=74.9187;InbreedingCoeff=0.9218;MQ=88.33;MQ0=3;MQRankSum=-1.819;QD=19.83;ReadPosRankSum=0.400;VQSLOD=3.4352;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:40.70:230,41,0	1/1:1,5:6:11.95:128,12,0	0/0:56,0:32:67.34:0,67,684	0/0:30,0:20:47.05:0,47,483	1/1:2,15:17:44.74:427,45,0	0/0:18,0:18:54.02:0,54,618	0/0:22,0:22:66.22:0,66,880	1/1:2,17:19:51.08:548,51,0	1/1:8,0:8:20.51:146,21,0	1/1:0,18:18:54.09:590,54,0	1/1:1,8:9:23.81:223,24,0	1/1:14,1:15:34.08:264,34,0	1/1:10,0:10:21.43:158,21,0	0/0:24,0:24:57.14:0,57,721	1/1:2,15:17:27.08:332,27,0	1/1:4,18:22:24.06:293,24,0	0/0:30,0:30:84.20:0,84,1071	0/0:25,0:25:69.14:0,69,867	1/1:0,19:19:57.10:630,57,0	1/1:1,20:21:47.85:471,48,0	1/1:0,9:9:12.04:147,12,0	1/1:13,1:14:36.79:336,37,0	1/1:15,1:16:38.91:365,39,0	1/1:14,0:14:23.74:207,24,0	1/1:2,11:13:6.02:74,6,0	0/1:11,1:13:1.01:1,0,295	1/1:1,20:21:42.13:516,42,0	0/0:5,0:5:13.81:0,14,116
chr10	78747606	.	A	AGC	4475.51	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=7.295;DP=509;FS=18.383;HRun=0;HaplotypeScore=113.9204;InbreedingCoeff=0.9199;MQ=70.67;MQ0=20;MQRankSum=-2.346;QD=12.13;ReadPosRankSum=2.185;VQSLOD=3.0523;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,1:21:34.02:282,34,0	1/1:5,0:5:11.87:90,12,0	0/0:24,0:13:29.04:0,29,280	0/0:44,0:21:33.77:0,34,393	1/1:15,0:15:8.99:75,9,0	1/1:17,0:17:34.17:245,34,0	1/1:19,0:19:46.70:301,47,0	1/1:37,0:37:84.70:541,85,0	1/1:4,13:17:11.90:141,12,0	1/1:15,0:14:36.81:234,37,0	1/1:12,0:11:11.94:91,12,0	1/1:16,0:16:35.37:250,35,0	1/1:2,19:21:12.51:210,13,0	0/0:15,0:15:29.65:0,30,252	1/1:18,0:17:21.31:160,21,0	1/1:22,0:21:35.04:275,35,0	0/0:23,0:23:65.92:0,66,627	0/0:16,0:15:22.83:0,23,205	1/1:16,0:15:38.15:235,38,0	1/1:20,0:20:29.69:208,30,0	1/1:13,0:13:16.96:120,17,0	1/1:14,1:15:12.30:138,12,0	1/1:6,8:15:2.16:51,2,0	1/1:14,2:17:25.18:291,25,0	1/1:14,0:13:26.78:192,27,0	0/0:12,0:11:17.80:0,18,146	1/1:22,0:21:51.56:346,52,0	0/0:6,0:5:14.91:0,15,114
chr10	78747607	.	GCTCTCTCTCT	G	877.11	PASS	AB=0.792;AC=3;AF=0.060;AN=50;BaseQRankSum=2.404;DP=558;FS=0.000;HRun=0;HaplotypeScore=181.3775;InbreedingCoeff=0.2646;MQ=67.35;MQ0=21;MQRankSum=-3.104;QD=24.36;ReadPosRankSum=0.928;VQSLOD=3.0789;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:23:12.04:0,12,523	0/0:7,0:7:3.01:0,3,104	0/0:23,0:12:3.01:0,3,42	./.	./.	1/1:11,6:17:24.06:561,24,0	0/1:14,4:19:24.22:418,0,24	0/0:39,0:39:15.04:0,15,496	0/0:17,0:17:9.03:0,9,315	0/0:17,0:14:10.59:0,11,400	0/0:14,0:12:9.01:0,9,219	0/0:16,0:16:15.03:0,15,368	0/0:21,0:21:14.17:0,14,405	0/0:15,0:15:24.08:0,24,1010	0/0:25,0:24:6.02:0,6,162	0/0:26,0:25:12.51:0,13,486	0/0:22,0:24:33.09:0,33,1204	0/0:16,0:21:18.06:0,18,843	0/0:19,0:18:17.43:0,17,428	0/0:22,0:22:4.37:0,4,58	0/0:14,0:16:5.89:0,6,194	0/0:14,0:14:9.03:0,9,279	0/0:15,0:15:2.02:0,2,94	0/0:18,0:17:24.08:0,24,632	0/0:20,0:19:2.77:0,3,24	0/0:9,0:15:27.06:0,27,980	0/0:26,0:25:27.07:0,27,968	./.
chr10	78748779	.	C	CAA	540.70	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-2.585;DP=575;FS=1.872;HRun=10;HaplotypeScore=72.8073;InbreedingCoeff=0.6682;MQ=72.30;MQ0=0;MQRankSum=-1.328;QD=13.86;ReadPosRankSum=0.405;VQSLOD=1.7052;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,19:25:44.64:635,45,0	0/0:7,0:7:18.04:0,18,183	0/0:7,0:6:13.27:0,13,123	0/1:14,0:13:4.79:5,0,59	0/0:28,0:28:66.10:0,66,671	0/0:19,0:19:48.07:0,48,488	0/0:18,0:18:51.09:0,51,510	0/0:33,0:34:89.80:0,90,868	0/0:13,0:13:26.98:0,27,275	0/0:29,0:29:51.05:0,51,519	0/0:21,0:21:57.13:0,57,580	0/0:21,0:22:44.79:0,45,510	0/0:25,0:25:53.99:0,54,539	0/0:17,0:18:28.38:0,28,438	0/0:27,0:27:63.08:0,63,641	0/0:20,0:20:45.03:0,45,451	0/0:21,0:22:40.34:0,40,551	0/0:21,0:21:9.54:0,10,437	0/0:18,0:18:45.07:0,45,458	0/0:26,0:26:65.91:0,66,653	0/0:13,0:13:33.07:0,33,336	0/0:16,0:16:45.08:0,45,451	0/0:24,0:24:63.13:0,63,641	0/0:22,0:22:48.05:0,48,480	0/0:19,0:18:51.09:0,51,519	0/0:23,0:23:54.07:0,54,543	0/0:30,0:30:84.11:0,84,837	0/0:14,0:14:26.99:0,27,275
chr10	78748934	.	ATT	A	809.40	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.444;DP=582;FS=0.545;HRun=15;HaplotypeScore=73.2294;InbreedingCoeff=0.8238;MQ=68.52;MQ0=0;MQRankSum=0.288;QD=11.90;ReadPosRankSum=6.402;VQSLOD=2.4841;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,2:27:58.06:276,58,0	0/0:8,0:10:23.55:0,24,276	0/0:17,0:12:0.79:0,1,105	0/0:8,0:7:9:0,9,103	0/0:20,0:22:65.64:0,66,789	1/1:3,18:23:53.38:446,53,0	1/1:6,11:18:19.85:227,20,0	0/0:22,2:26:13.10:0,13,417	0/0:10,0:19:14.57:0,15,134	0/0:24,0:26:47.50:0,48,483	0/0:12,0:13:26.57:0,27,323	0/0:9,0:24:33.02:0,33,358	0/0:11,0:26:19.86:0,20,210	0/0:6,0:15:15:0,15,168	0/0:27,1:32:50.62:0,51,786	0/0:21,0:24:58.59:0,59,653	0/0:12,0:13:32.99:0,33,330	0/0:11,0:17:29.92:0,30,271	0/0:21,0:21:45.04:0,45,514	0/0:18,0:21:47.06:0,47,550	0/0:21,0:22:45.49:0,45,542	0/0:7,0:21:44.58:0,45,470	0/0:6,0:22:27.95:0,28,266	0/0:10,0:30:15.03:0,15,165	0/0:16,0:19:36.52:0,37,413	0/0:21,2:28:2.70:0,3,486	0/0:17,0:21:33.84:0,34,431	0/0:17,0:17:48.12:0,48,608
chr10	78749915	.	GC	G	5341.50	PASS	AB=0.930;AC=54;AF=0.964;AN=56;BaseQRankSum=-5.992;DP=464;FS=6.463;HRun=6;HaplotypeScore=70.5617;InbreedingCoeff=-0.0498;MQ=76.90;MQ0=29;MQRankSum=-0.032;QD=11.51;ReadPosRankSum=0.870;VQSLOD=2.9325;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:17:44.79:348,45,0	1/1:4,0:4:8.73:60,9,0	0/1:66,4:20:67.64:68,0,123	0/1:58,6:19:9.68:108,0,10	1/1:12,0:12:26.19:207,26,0	1/1:13,0:13:30.35:236,30,0	1/1:14,0:13:35.88:288,36,0	1/1:22,0:22:50.56:396,51,0	1/1:16,0:15:30.84:252,31,0	1/1:1,14:15:26.70:202,27,0	1/1:1,10:11:17.66:108,18,0	1/1:11,0:10:21.82:175,22,0	1/1:11,0:11:26.68:208,27,0	1/1:15,0:15:44.59:341,45,0	1/1:16,0:16:41.96:358,42,0	1/1:15,0:14:29.93:248,30,0	1/1:22,0:22:51.52:380,52,0	1/1:12,0:12:26.92:218,27,0	1/1:2,6:8:12.83:85,13,0	1/1:1,4:5:13.35:78,13,0	1/1:14,0:14:23.87:184,24,0	1/1:1,0:7:14.78:95,15,0	1/1:6,0:6:15.46:129,15,0	1/1:13,0:12:18.08:124,18,0	1/1:8,0:8:15.87:128,16,0	1/1:5,0:5:6:51,6,0	1/1:2,0:2:5.96:44,6,0	1/1:34,0:24:26.50:222,26,0
chr10	78750492	.	CT	C	555.73	PASS	AB=0.879;AC=13;AF=0.232;AN=56;BaseQRankSum=8.448;DP=719;FS=3.124;HRun=13;HaplotypeScore=83.5873;InbreedingCoeff=-0.1393;MQ=76.16;MQ0=4;MQRankSum=0.634;QD=1.59;ReadPosRankSum=1.977;VQSLOD=-0.7525;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,21:33:19.24:437,19,0	0/0:6,0:6:9.01:0,9,88	0/1:38,2:29:19.74:20,0,166	0/0:24,0:18:0.40:0,0,75	0/0:23,3:27:12.42:0,12,470	0/1:23,5:30:37.64:38,0,316	0/0:18,3:21:4.26:0,4,365	0/0:35,2:38:49.93:0,50,602	0/1:17,0:17:7.76:8,0,248	0/1:26,4:31:21.21:21,0,440	0/1:25,6:31:18.47:18,0,469	0/0:15,2:17:1.26:0,1,336	0/0:20,3:23:10.26:0,10,421	0/0:10,0:12:23.71:0,24,204	0/0:33,3:36:34.20:0,34,626	0/1:20,2:22:1.76:2,0,304	0/1:28,7:35:22.42:22,0,609	0/1:25,7:32:40.55:41,0,436	0/0:21,1:23:31.98:0,32,447	0/0:25,2:31:17.93:0,18,480	0/1:13,2:15:13.79:14,0,194	0/0:20,1:22:22.33:0,22,410	0/0:19,1:21:19.83:0,20,328	0/0:20,1:21:14.07:0,14,294	0/1:24,3:29:12.67:13,0,384	0/1:26,7:35:72.56:73,0,460	0/0:29,1:31:56.01:0,56,673	0/0:14,2:16:14.15:0,14,299
chr10	78750834	.	AT	A	462.45	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.439;DP=503;FS=2.305;HRun=3;HaplotypeScore=58.9266;InbreedingCoeff=0.9258;MQ=75.00;MQ0=0;MQRankSum=-2.864;QD=30.83;ReadPosRankSum=0.120;VQSLOD=3.3118;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:45.14:557,45,0	0/0:6,0:6:15.05:0,15,216	0/0:9,0:9:24.08:0,24,344	0/0:13,0:13:8.87:0,9,384	0/0:30,0:30:90.27:0,90,1254	0/0:15,0:15:45.15:0,45,648	0/0:14,0:14:42.12:0,42,570	0/0:20,0:20:54.18:0,54,774	0/0:12,0:12:36.12:0,36,519	0/0:26,0:26:78.26:0,78,1123	0/0:26,0:26:75.25:0,75,1080	0/0:19,0:19:57.18:0,57,803	0/0:13,0:13:39.12:0,39,546	0/0:23,0:23:66.22:0,66,946	0/0:19,0:19:54.18:0,54,778	0/0:24,0:24:72.24:0,72,1037	0/0:16,0:16:48.16:0,48,691	0/0:15,0:15:45.12:0,45,625	0/0:22,0:22:63.19:0,63,871	0/0:25,0:25:75.25:0,75,1078	0/0:19,0:19:54.17:0,54,758	0/0:19,0:19:57.19:0,57,820	0/0:22,0:22:60.19:0,60,838	0/0:16,0:16:48.16:0,48,691	0/0:23,0:23:69.23:0,69,992	0/0:13,0:13:39.13:0,39,562	0/0:19,0:19:51.17:0,51,734	0/0:10,0:10:24.08:0,24,341
chr10	78755203	.	AACACAC	A	4575.11	PASS	AC=36;AF=0.692;AN=52;BaseQRankSum=7.705;DP=608;FS=0.619;HRun=0;HaplotypeScore=150.7954;InbreedingCoeff=0.8275;MQ=59.69;MQ0=5;MQRankSum=-8.169;QD=11.61;ReadPosRankSum=2.038;VQSLOD=4.0459;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:12.04:167,12,0	0/0:9,0:9:9.03:0,9,286	./.	./.	1/1:13,7:21:18.87:267,19,0	0/0:20,0:25:30.10:0,30,859	0/0:22,0:29:9.03:0,9,201	1/1:29,2:31:2.89:26,3,0	1/1:12,12:24:27.09:539,27,0	1/1:17,3:20:5.87:86,6,0	1/1:11,4:15:3.01:61,3,0	1/1:12,0:22:30.10:418,30,0	1/1:7,0:14:18.06:251,18,0	0/0:17,0:17:12.04:0,12,326	1/1:19,8:25:24.08:485,24,0	1/1:15,14:31:39.13:751,39,0	0/0:25,0:27:44.29:0,44,1268	0/0:21,0:21:26.83:0,27,568	1/1:14,4:18:8.13:143,8,0	1/1:12,6:17:9.03:182,9,0	1/1:27,2:29:9.03:138,9,0	1/1:11,0:20:21.07:293,21,0	1/1:9,0:17:15.05:209,15,0	1/1:7,0:14:6.02:84,6,0	1/1:15,4:19:10.27:172,10,0	0/0:26,0:26:39.11:0,39,1075	1/1:12,8:20:15.05:303,15,0	0/0:8,0:15:15.05:0,15,432
chr10	78755231	.	CACACACACACACACACACAT	C	1857.03	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=9.314;DP=616;FS=3.232;HRun=0;HaplotypeScore=289.2039;InbreedingCoeff=0.1663;MQ=52.25;MQ0=15;MQRankSum=-7.550;QD=16.73;ReadPosRankSum=6.574;VQSLOD=1.8241;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:12.04:667,12,0	0/0:7,0:7:18.06:0,18,1423	0/0:22,0:7:21.05:0,21,437	0/0:26,0:13:32.37:0,32,714	0/0:20,0:20:42.13:0,42,2139	0/0:27,0:27:63.12:0,63,3815	0/0:34,0:34:55.10:0,55,2649	0/0:26,0:26:75.16:0,75,2100	0/0:20,0:20:51.16:0,51,2500	0/0:23,0:23:69.13:0,69,2403	0/0:16,0:16:30.02:0,30,951	0/1:21,0:20:99:424,0,212	0/1:16,0:16:99:284,0,375	0/0:17,0:17:45.10:0,45,2062	0/0:25,0:23:61.97:0,62,2642	0/0:36,0:35:87.19:0,87,3247	0/0:28,0:28:60.20:0,60,5415	0/0:18,0:18:49.27:0,49,2846	0/0:16,0:15:38.06:0,38,1375	0/0:20,0:19:35.11:0,35,1777	0/0:39,0:38:90.20:0,90,3817	0/1:19,0:19:99:332,0,155	0/1:16,0:16:99:205,0,136	0/1:16,0:16:79.92:80,0,101	0/0:20,0:20:45.09:0,45,1773	0/0:32,0:32:90.30:0,90,5640	0/0:20,0:20:48.13:0,48,2074	0/0:13,0:13:24.08:0,24,1866
chr10	78756912	.	G	GC	7491.13	PASS	AB=0.960;AC=43;AF=0.768;AN=56;BaseQRankSum=-4.998;DP=534;FS=2.427;HRun=8;HaplotypeScore=75.5752;InbreedingCoeff=0.8607;MQ=84.37;MQ0=0;MQRankSum=-1.948;QD=18.09;ReadPosRankSum=0.014;VQSLOD=4.8020;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:25:9.92:55,10,0	1/1:2,14:16:39.12:449,39,0	0/1:23,1:23:10.50:11,0,237	0/0:17,0:17:17.95:0,18,251	1/1:1,20:21:57.13:643,57,0	1/1:7,0:11:8.28:38,8,0	1/1:13,0:16:5.77:31,6,0	1/1:3,9:12:24.06:267,24,0	1/1:0,19:19:51.15:589,51,0	1/1:4,18:22:56.96:613,57,0	1/1:6,11:17:39.09:431,39,0	1/1:4,0:12:17.04:86,17,0	1/1:3,0:19:34.09:173,34,0	0/0:28,0:28:63:0,63,571	1/1:3,17:20:51.15:589,51,0	1/1:6,17:23:45.08:504,45,0	0/0:29,0:29:84.02:0,84,762	0/0:14,0:14:42.02:0,42,384	1/1:3,16:19:23.69:516,24,0	1/1:2,13:15:36.07:401,36,0	1/1:5,21:27:60.01:672,60,0	1/1:5,1:17:14.20:72,14,0	1/1:6,0:17:31.51:176,32,0	1/1:5,1:28:34.09:173,34,0	1/1:2,15:17:42.12:483,42,0	0/0:16,0:16:41.75:0,42,368	1/1:1,16:17:45.13:519,45,0	0/0:16,0:16:45.02:0,45,412
chr10	78757444	.	CGTGCGT	C	2375.42	PASS	AB=1.000;AC=38;AF=0.704;AN=54;BaseQRankSum=-0.421;DP=599;FS=13.011;HRun=0;HaplotypeScore=159.6529;InbreedingCoeff=0.3324;MQ=70.92;MQ0=5;MQRankSum=-2.426;QD=5.62;ReadPosRankSum=4.779;VQSLOD=1.6866;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:38.95:0,39,676	1/1:11,0:11:5.99:48,6,0	1/1:30,0:25:2.04:6,2,0	./.	1/1:12,0:12:2.99:24,3,0	0/1:16,0:16:6.75:36,0,7	0/0:23,0:23:0.47:0,0,1	1/1:23,0:23:20.88:158,21,0	1/1:29,1:29:15.34:339,15,0	1/1:23,0:22:13.25:153,13,0	1/1:9,0:9:5.99:48,6,0	0/1:30,0:30:12.34:12,0,553	0/1:20,0:20:10.93:11,0,189	0/0:22,0:22:39.09:0,39,850	1/1:15,0:15:8.99:75,9,0	1/1:15,0:15:15.01:167,15,0	0/0:36,0:36:74.42:0,74,1739	0/0:43,0:43:86.24:0,86,2204	1/1:18,0:17:21.01:233,21,0	1/1:9,0:9:5.99:48,6,0	1/1:44,0:42:35.95:297,36,0	0/1:16,0:16:12.92:13,0,171	0/1:9,0:9:36.89:37,0,107	0/1:34,0:34:68.68:69,0,669	1/1:19,0:19:9.03:140,9,0	1/1:12,13:25:32.83:394,33,0	1/1:10,0:10:14.94:161,15,0	1/1:4,0:4:5.97:78,6,0
chr10	78757460	.	CGTGTGCGTGTGCGTGTGCGTGTGCGTGTGT	C	515.78	PASS	AB=0.974;AC=6;AF=0.107;AN=56;BaseQRankSum=-0.099;DP=552;FS=3.770;HRun=0;HaplotypeScore=376.2014;InbreedingCoeff=0.4945;MQ=59.08;MQ0=8;MQRankSum=-1.200;QD=6.79;ReadPosRankSum=-1.454;VQSLOD=1.3224;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.20:0,72,5566	0/0:6,0:6:8.76:0,9,376	0/1:22,0:16:52.31:52,0,272	0/1:17,0:12:34.60:35,0,106	0/0:9,0:9:15.02:0,15,183	1/1:0,19:19:6.02:398,6,0	1/1:17,0:17:12.01:156,12,0	0/0:19,0:19:48.10:0,48,1480	0/0:34,0:33:63.12:0,63,4064	0/0:15,0:14:8.21:0,8,1147	0/0:8,0:8:12.03:0,12,522	0/0:25,0:25:66.05:0,66,4686	0/0:22,0:22:36.08:0,36,2534	0/0:24,0:24:60:0,60,5369	0/0:14,0:14:23.94:0,24,663	0/0:15,0:15:24.03:0,24,777	0/0:36,0:36:99:0,99,10289	0/0:44,0:44:99:0,132,13509	0/0:22,0:20:53.84:0,54,1437	0/0:9,0:9:14.14:0,14,398	0/0:36,0:34:50.78:0,51,1918	0/0:16,0:15:27.56:0,28,1575	0/0:7,0:7:18.05:0,18,1243	0/0:36,0:35:87.21:0,87,7464	0/0:17,0:17:15.02:0,15,501	0/0:26,0:25:63.21:0,63,3752	0/0:6,0:6:15.05:0,15,777	0/0:3,0:3:9.03:0,9,647
chr10	78757476	.	TGC	T	143.87	PASS	AB=0.975;AC=15;AF=0.268;AN=56;BaseQRankSum=8.640;DP=521;FS=0.630;HRun=0;HaplotypeScore=135.8376;InbreedingCoeff=0.2520;MQ=52.23;MQ0=8;MQRankSum=-2.994;QD=0.86;ReadPosRankSum=-1.715;VQSLOD=2.1077;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.26:0,81,1472	0/0:9,0:9:10.83:0,11,128	1/1:7,0:4:1.25:3,1,0	0/1:6,0:2:0:0,0,0	0/1:8,0:8:17.80:18,0,42	1/1:19,0:19:5.78:31,6,0	1/1:29,0:29:1.38:26,1,0	0/0:19,0:18:47.65:0,48,473	0/0:28,0:27:34.70:0,35,347	0/1:13,0:12:3.35:3,0,195	0/0:5,0:5:8.92:0,9,95	0/0:20,1:21:0.34:0,0,426	0/1:21,0:21:40.12:40,0,180	0/0:20,0:20:51.06:0,51,876	0/0:10,0:10:11.90:0,12,86	0/0:15,0:15:3.59:0,4,51	0/0:40,0:40:99:0,113,1866	0/0:51,0:51:99:0,149,2514	0/0:17,0:15:25.69:0,26,307	0/0:8,0:8:11.22:0,11,94	0/0:35,0:33:16.36:0,16,279	0/0:12,0:11:20.98:0,21,237	0/1:6,1:7:0.71:1,0,157	0/1:37,2:38:99:139,0,600	1/1:15,0:15:4.66:11,5,0	0/0:24,0:23:13.10:0,13,427	0/0:10,0:10:10.07:0,10,90	0/1:3,0:3:0.95:1,0,62
chr10	78757478	.	C	CGT	1413.96	PASS	AB=0.882;AC=13;AF=0.241;AN=54;BaseQRankSum=3.023;DP=510;FS=10.014;HRun=0;HaplotypeScore=128.6300;InbreedingCoeff=0.0452;MQ=51.48;MQ0=9;MQRankSum=2.503;QD=6.86;ReadPosRankSum=-0.169;VQSLOD=2.8012;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:75.22:0,75,986	0/0:7,0:9:1.91:0,2,39	0/0:2,0:1:2.50:0,2,9	./.	0/0:7,0:8:3.01:0,3,41	0/1:19,0:19:0.25:0,0,10	0/0:19,0:19:6.06:0,6,66	0/1:19,0:18:0.60:1,0,189	0/0:28,0:27:26.24:0,26,179	0/0:9,0:10:1.71:0,2,52	0/0:5,0:5:3.90:0,4,43	0/1:13,6:19:26.79:351,0,27	0/1:6,17:24:19.47:195,0,19	0/0:21,0:21:48.14:0,48,630	0/1:9,0:10:0:0,0,0	0/0:13,0:15:3.72:0,4,21	0/0:41,0:41:99:0,107,1366	0/0:53,0:53:99:0,144,1857	0/1:16,0:16:1.29:1,0,174	1/1:5,0:6:2.14:23,2,0	0/1:34,0:32:17.95:18,0,35	1/1:9,2:10:9.02:108,9,0	0/1:6,1:7:14.73:40,0,15	0/1:24,14:37:19.88:804,0,20	0/0:1,0:16:8.48:0,8,41	0/0:25,0:24:39.71:0,40,415	0/0:9,0:11:9.33:0,9,69	0/0:3,0:3:0.91:0,1,4
chr10	78757484	.	CGT	C	343.12	PASS	AB=0.942;AC=20;AF=0.385;AN=52;BaseQRankSum=4.654;DP=507;FS=6.316;HRun=0;HaplotypeScore=135.7403;InbreedingCoeff=0.1062;MQ=51.22;MQ0=9;MQRankSum=-3.364;QD=1.22;ReadPosRankSum=0.222;VQSLOD=1.8485;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:60.11:0,60,628	0/0:8,0:8:3.01:0,3,36	./.	./.	0/0:8,0:8:2.99:0,3,24	1/1:19,0:19:2.84:14,3,0	0/0:17,0:17:7.12:0,7,38	0/0:20,0:19:7.62:0,8,54	0/1:28,0:27:0.56:1,0,157	0/1:11,0:10:5.93:6,0,31	0/0:4,0:4:3:0,3,25	0/0:22,0:22:38.89:0,39,340	0/0:22,0:21:19.88:0,20,150	0/1:17,4:22:59.34:59,0,449	1/1:10,0:10:2.68:11,3,0	1/1:17,0:17:7.79:42,8,0	0/1:36,5:41:45.14:45,0,1157	0/1:43,9:52:99:162,0,1201	0/1:17,0:15:18.19:18,0,32	1/1:6,0:6:0.47:1,0,0	0/0:33,0:31:2.99:0,3,29	0/0:10,0:9:10.82:0,11,90	0/0:6,0:6:7.25:0,7,73	0/0:39,0:39:61.94:0,62,542	1/1:16,0:16:10.52:47,11,0	0/1:26,1:26:65.86:66,0,407	0/1:13,0:13:11.61:12,0,99	1/1:2,0:2:2.37:8,2,0
chr10	78757528	.	A	AGAGG	4923.46	PASS	AB=0.960;AC=26;AF=0.464;AN=56;BaseQRankSum=-2.618;DP=501;FS=11.379;HRun=0;HaplotypeScore=138.0225;InbreedingCoeff=0.8090;MQ=65.14;MQ0=3;MQRankSum=-5.856;QD=26.33;ReadPosRankSum=-8.064;VQSLOD=1.3767;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:73.21:0,73,1299	1/1:3,5:9:8.99:171,9,0	0/0:13,0:8:16.81:0,17,118	0/1:26,0:15:4.07:4,0,58	1/1:4,5:10:9.03:197,9,0	0/0:19,0:19:21.07:0,21,347	0/0:40,0:40:83.71:0,84,1201	1/1:7,7:14:30.06:545,30,0	0/0:13,0:13:35.87:0,36,408	1/1:2,10:12:30.10:723,30,0	1/1:2,4:6:15.05:356,15,0	0/0:22,0:22:44.96:0,45,650	0/0:18,0:18:35.97:0,36,496	0/0:13,0:13:30.05:0,30,461	1/1:0,8:8:15.05:378,15,0	1/1:2,9:11:21.07:522,21,0	0/0:42,0:42:99:0,102,1575	0/0:41,0:41:99:0,102,1568	1/1:6,6:13:3.78:244,4,0	1/1:4,5:9:12.04:297,12,0	1/1:5,12:17:15.02:326,15,0	0/0:7,0:7:21.07:0,21,347	0/0:9,0:9:21.07:0,21,324	0/0:40,0:40:99:0,102,1463	1/1:9,3:12:15.05:339,15,0	0/1:20,1:21:16.07:16,0,800	1/1:8,6:15:39.01:806,39,0	0/0:2,0:2:6.02:0,6,104
chr10	78757538	.	A	AGG	1515.87	PASS	AB=0.963;AC=15;AF=0.268;AN=56;BaseQRankSum=5.195;DP=543;FS=7.067;HRun=3;HaplotypeScore=127.6237;InbreedingCoeff=0.0510;MQ=71.31;MQ0=6;MQRankSum=-4.550;QD=9.08;ReadPosRankSum=0.015;VQSLOD=0.0374;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1328	0/1:6,1:7:55.73:56,0,76	0/0:36,0:18:29.75:0,30,248	0/0:46,0:25:29.91:0,30,314	0/1:12,0:12:12.67:13,0,98	0/1:19,0:19:12.68:13,0,267	0/0:37,0:37:59.27:0,59,1197	0/1:21,0:19:99:154,0,334	0/0:15,0:15:42.05:0,42,560	0/1:14,0:14:99:189,0,140	0/1:8,0:8:79.29:79,0,110	0/0:22,0:22:65.94:0,66,823	0/0:17,0:17:38.98:0,39,491	0/0:11,0:11:30.05:0,30,410	1/1:8,0:8:15.01:134,15,0	1/1:9,0:9:21.01:191,21,0	0/0:37,0:37:99:0,105,1430	0/0:35,0:35:99:0,102,1428	0/1:12,1:13:99:147,0,153	0/1:10,0:10:60.89:61,0,119	0/1:15,1:16:0.31:183,0,0	0/0:7,0:7:20.96:0,21,291	0/0:9,0:9:23.93:0,24,313	0/0:41,0:41:99:0,117,1507	0/1:13,0:13:23.19:136,0,23	0/0:22,0:22:38.64:0,39,833	0/1:14,3:17:87.29:327,0,87	0/0:2,0:2:6.02:0,6,92
chr10	78758106	.	AG	A	660.94	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.210;DP=547;FS=0.000;HRun=4;HaplotypeScore=51.8680;InbreedingCoeff=0.9908;MQ=83.63;MQ0=0;MQRankSum=-2.612;QD=31.47;ReadPosRankSum=0.791;VQSLOD=3.7976;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.20:0,60,840	0/0:13,0:13:39.13:0,39,545	0/0:18,0:18:48.15:0,48,638	0/0:17,0:16:35.61:0,36,519	0/0:31,0:31:93.30:0,93,1280	0/0:17,0:17:51.17:0,51,713	0/0:6,0:6:18.06:0,18,249	0/0:37,0:37:93.25:0,93,1262	1/1:0,21:21:63.19:756,63,0	0/0:24,0:24:72.23:0,72,990	0/0:28,0:28:75.23:0,75,1032	0/0:20,0:20:60.20:0,60,840	0/0:21,0:21:63.21:0,63,867	0/0:10,0:10:30.10:0,30,420	0/0:16,0:16:48.16:0,48,668	0/0:18,0:18:54.18:0,54,748	0/0:25,0:25:72.24:0,72,1008	0/0:24,0:24:69.23:0,69,965	0/0:15,0:15:42.13:0,42,573	0/0:26,0:26:75.25:0,75,1045	0/0:14,0:14:42.14:0,42,588	0/0:11,0:11:33.11:0,33,460	0/0:22,0:22:63.20:0,63,862	0/0:11,0:11:33.11:0,33,462	0/0:20,0:20:60.20:0,60,837	0/0:21,0:21:63.21:0,63,881	0/0:23,0:23:66.21:0,66,908	0/0:15,0:15:42.14:0,42,584
chr10	78758893	.	T	TG	10550.12	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-11.889;DP=718;FS=15.630;HRun=6;HaplotypeScore=70.0602;InbreedingCoeff=0.9698;MQ=74.75;MQ0=0;MQRankSum=-0.299;QD=28.98;ReadPosRankSum=1.280;VQSLOD=3.9004;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:90.20:0,90,917	1/1:2,16:18:48.15:604,48,0	0/0:21,0:20:15.96:0,16,285	0/0:14,0:14:1.82:0,2,260	1/1:3,34:37:93.30:1160,93,0	0/0:24,0:24:60.13:0,60,612	0/0:19,0:19:57.05:0,57,556	1/1:3,26:29:72.22:891,72,0	1/1:3,1:36:71.18:367,71,0	1/1:4,21:25:60.19:752,60,0	1/1:1,20:21:54.17:677,54,0	0/0:24,0:24:63.11:0,63,633	0/0:21,0:21:51.11:0,51,520	0/0:26,0:26:66.13:0,66,667	1/1:1,29:30:81.26:1019,81,0	1/1:1,23:24:59.93:728,60,0	0/0:41,0:40:99:0,114,1162	0/0:16,0:16:36.08:0,36,367	1/1:5,22:27:66.21:830,66,0	1/1:4,32:36:93.30:1166,93,0	1/1:4,16:20:42.13:527,42,0	0/0:16,0:16:45.10:0,45,459	0/0:19,0:19:48.11:0,48,490	0/0:26,0:26:72.16:0,72,735	1/1:6,28:34:78.25:980,78,0	0/0:34,1:35:52.46:0,52,850	1/1:2,25:25:69.18:849,69,0	0/0:17,0:17:45.10:0,45,459
chr10	78759455	.	CT	C	121.07	PASS	AB=0.879;AC=4;AF=0.071;AN=56;BaseQRankSum=2.845;DP=485;FS=0.000;HRun=12;HaplotypeScore=61.5329;InbreedingCoeff=0.3149;MQ=77.39;MQ0=5;MQRankSum=-0.378;QD=3.56;ReadPosRankSum=0.853;VQSLOD=-0.3181;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:73.95:0,74,766	0/0:5,0:5:15.02:0,15,146	0/0:30,0:18:16.66:0,17,205	0/0:33,0:16:4.26:0,4,98	0/0:20,2:22:3.93:0,4,368	0/0:18,0:18:33.07:0,33,335	0/1:10,2:12:13.39:13,0,241	0/0:25,1:25:1.20:0,1,348	1/1:4,9:13:26.88:209,27,0	0/0:17,1:18:42.03:0,42,407	0/0:20,0:20:48.07:0,48,471	0/0:18,0:17:42.08:0,42,425	0/0:11,2:13:12.76:0,13,292	0/0:7,0:7:15.03:0,15,152	0/0:10,0:10:24.05:0,24,244	0/0:20,0:20:13.28:0,13,414	0/0:22,0:24:53.92:0,54,524	0/0:22,0:22:50.91:0,51,483	0/0:18,2:20:4.62:0,5,405	0/0:16,1:18:21.76:0,22,372	0/0:9,0:9:18.03:0,18,177	0/1:8,1:9:5.20:5,0,134	0/0:15,0:16:41.90:0,42,401	0/0:9,0:9:27.05:0,27,274	0/0:20,0:20:53.12:0,53,514	0/0:16,1:17:15.83:0,16,337	0/0:15,0:15:42.04:0,42,406	0/0:7,0:7:12.02:0,12,122
chr10	78759913	.	CA	C	630.67	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.198;DP=725;FS=4.132;HRun=1;HaplotypeScore=73.2958;InbreedingCoeff=0.9994;MQ=74.30;MQ0=0;MQRankSum=-1.179;QD=27.42;ReadPosRankSum=-1.128;VQSLOD=3.1456;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,156,2131	0/0:10,0:10:30.09:0,30,408	0/0:30,0:27:71.96:0,72,944	0/0:29,0:29:56.99:0,57,887	0/0:37,0:37:99:0,108,1487	0/0:22,0:22:60.09:0,60,829	0/0:28,0:28:84.20:0,84,1155	0/0:24,0:24:60.07:0,60,741	1/1:0,23:23:54.11:726,54,0	0/0:26,0:26:68.71:0,69,1035	0/0:18,0:18:54.13:0,54,711	0/0:35,0:35:99:0,105,1427	0/0:28,0:28:81.23:0,81,1102	0/0:33,0:33:92.91:0,93,1305	0/0:22,0:22:66.19:0,66,905	0/0:35,0:35:99:0,105,1494	0/0:37,0:37:99:0,111,1546	0/0:16,0:16:48.11:0,48,644	0/0:24,0:24:65.89:0,66,906	0/0:17,0:17:48.13:0,48,635	0/0:27,0:27:81.18:0,81,1115	0/0:24,0:24:72.23:0,72,1007	0/0:17,0:17:45.12:0,45,604	0/0:25,0:25:75.11:0,75,979	0/0:16,0:16:48.15:0,48,663	0/0:31,0:31:93.26:0,93,1284	0/0:21,0:21:62.94:0,63,850	0/0:17,0:17:51.11:0,51,656
chr10	78763446	.	CAT	C	670.51	PASS	AB=0.891;AC=19;AF=0.339;AN=56;BaseQRankSum=10.629;DP=415;FS=28.909;HRun=0;HaplotypeScore=108.0025;InbreedingCoeff=-0.4568;MQ=36.65;MQ0=0;MQRankSum=-6.730;QD=2.22;ReadPosRankSum=-0.687;VQSLOD=0.4365;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,2:14:23.15:0,23,461	0/1:2,0:2:12.05:20,0,12	0/0:6,0:4:12.04:0,12,216	0/0:3,1:3:8.94:0,9,98	0/0:11,0:11:16.60:0,17,252	0/1:10,0:10:9.56:10,0,383	0/1:19,2:21:35.39:35,0,520	0/1:18,3:21:98.64:99,0,468	0/1:19,3:22:99:157,0,593	0/1:22,0:22:11.29:11,0,695	0/0:5,0:5:12.04:0,12,232	0/1:17,3:20:9.14:9,0,720	0/1:13,2:15:99:119,0,422	0/1:14,8:21:13.75:14,0,647	0/1:11,0:11:16.42:16,0,75	0/1:9,5:14:99:122,0,194	0/0:18,1:19:8.61:0,9,798	0/1:16,1:17:11.27:11,0,598	0/1:7,0:5:11.30:11,0,107	0/1:22,1:23:3.51:4,0,822	0/1:27,1:28:1.09:1,0,777	0/1:6,10:16:86.87:87,0,200	0/1:10,8:17:28.05:28,0,389	0/0:14,1:15:26.91:0,27,500	0/0:19,0:19:22.44:0,22,635	0/0:18,1:18:20.91:0,21,722	0/1:7,0:7:1.64:2,0,168	0/1:5,1:6:64.76:65,0,100
chr10	78763454	.	CAT	C	1196.85	PASS	AB=0.912;AC=19;AF=0.339;AN=56;BaseQRankSum=12.248;DP=543;FS=49.912;HRun=0;HaplotypeScore=138.1069;InbreedingCoeff=-0.4936;MQ=38.17;MQ0=4;MQRankSum=-8.481;QD=3.23;ReadPosRankSum=-0.636;VQSLOD=0.8139;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:18.39:0,18,565	0/1:1,1:2:12.05:39,0,12	0/0:12,0:7:20.95:0,21,299	0/0:9,0:4:12:0,12,192	0/0:16,0:16:27.51:0,28,409	0/1:11,2:13:74.85:75,0,425	0/1:26,5:31:99:122,0,680	0/1:37,1:37:99:172,0,756	0/1:22,3:25:99:210,0,626	0/1:23,2:25:15.41:15,0,776	0/0:9,0:9:14.95:0,15,256	0/1:23,1:24:8.05:8,0,789	0/1:14,4:18:99:183,0,499	0/1:23,0:22:9.87:10,0,810	0/1:13,2:14:44.78:45,0,160	0/1:17,0:17:99:116,0,241	0/0:27,0:27:16.96:0,17,931	0/1:18,2:20:33.98:34,0,660	0/1:12,1:9:84.26:84,0,104	0/1:22,2:23:21.29:21,0,921	0/0:38,0:38:24.97:0,25,1117	0/1:22,0:23:80.72:81,0,455	0/1:20,1:20:42.13:42,0,450	0/0:18,1:19:29.67:0,30,534	0/0:22,1:21:8.55:0,9,759	0/1:22,1:22:17.82:18,0,739	0/1:10,0:9:3.72:4,0,220	0/1:5,1:6:74.31:74,0,107
chr10	78763525	.	AAT	A	6965.23	PASS	AB=0.893;AC=26;AF=0.464;AN=56;BaseQRankSum=18.339;DP=1015;FS=10.572;HRun=0;HaplotypeScore=259.8897;InbreedingCoeff=0.4175;MQ=58.18;MQ0=12;MQRankSum=-2.768;QD=11.49;ReadPosRankSum=2.564;VQSLOD=3.3412;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,1:43:27.71:0,28,1997	1/1:6,2:6:17.78:162,18,0	0/0:43,0:30:20.42:0,20,619	0/0:44,0:26:33.84:0,34,574	1/1:31,5:36:87.45:627,87,0	0/0:17,1:19:9.84:0,10,888	0/0:37,0:38:74.24:0,74,1647	0/1:43,1:42:99:265,0,408	1/1:30,6:36:87.58:652,88,0	1/1:45,6:51:9.92:674,10,0	0/1:31,5:36:1.20:473,0,1	0/0:32,1:33:44.96:0,45,1588	0/0:30,3:33:8.23:0,8,1385	0/0:29,1:30:5.17:0,5,1378	1/1:28,1:28:72.62:462,73,0	1/1:35,0:33:56.23:445,56,0	0/0:49,1:50:88.62:0,89,2149	0/0:34,0:34:99:0,102,1845	0/1:31,0:24:76.06:151,0,76	0/1:30,7:36:24.40:488,0,24	1/1:85,0:82:99:1131,135,0	0/1:34,8:42:87.55:88,0,1683	0/1:26,6:32:99:114,0,1230	0/0:41,1:42:63.33:0,63,1688	1/1:24,6:29:58.09:546,58,0	0/1:32,8:40:99:315,0,1398	1/1:20,1:20:57.91:346,58,0	0/1:12,1:13:25.26:25,0,596
chr10	78763527	.	TAC	T	13149.95	PASS	AB=0.882;AC=27;AF=0.482;AN=56;BaseQRankSum=11.536;DP=1029;FS=8.416;HRun=0;HaplotypeScore=244.1305;InbreedingCoeff=0.7397;MQ=57.99;MQ0=13;MQRankSum=-3.304;QD=23.82;ReadPosRankSum=1.071;VQSLOD=3.9656;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:59.46:0,59,1751	1/1:5,4:7:12.87:202,13,0	0/0:43,0:29:34.78:0,35,541	0/0:43,0:25:30.32:0,30,515	1/1:18,18:36:85.80:1039,86,0	0/0:20,0:20:31.01:0,31,760	0/0:38,0:38:71.96:0,72,1429	0/1:22,21:41:99:857,0,179	1/1:14,21:35:84.51:1074,85,0	1/1:21,32:53:90.08:1400,90,0	1/1:13,22:35:40.84:902,41,0	0/0:34,0:34:61.84:0,62,1371	0/0:35,0:35:39.99:0,40,1323	0/0:31,0:31:35.87:0,36,1250	1/1:8,21:28:73.48:924,73,0	1/1:4,30:32:81.26:1038,81,0	0/0:52,0:52:99:0,102,1952	0/0:35,0:35:99:0,99,1604	1/1:17,13:23:33.60:552,34,0	1/1:21,17:37:68.70:837,69,0	1/1:24,62:83:99:2575,163,0	0/0:43,0:43:0.94:0,1,1471	0/1:33,0:33:27.11:27,0,1084	0/0:44,0:44:76.79:0,77,1462	1/1:14,16:29:45.14:852,45,0	0/1:39,1:40:99:162,0,1207	1/1:4,17:20:52.20:710,52,0	0/0:13,0:13:7.63:0,8,527
chr10	78763597	.	TACACACACACCCAAAC	T	7937.23	PASS	AB=0.857;AC=18;AF=0.321;AN=56;BaseQRankSum=4.209;DP=844;FS=104.342;HRun=0;HaplotypeScore=400.7188;InbreedingCoeff=0.3177;MQ=49.35;MQ0=15;MQRankSum=-3.789;QD=23.21;ReadPosRankSum=0.570;VQSLOD=-0.4539;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:90.22:0,90,4216	0/1:4,7:9:1.91:127,0,2	0/1:40,0:14:11.65:12,0,41	0/0:40,0:17:15.05:0,15,425	0/1:11,2:13:24.40:383,0,24	0/0:22,0:22:57.15:0,57,2864	0/0:29,0:29:39.13:0,39,2123	1/1:34,15:47:2.08:790,2,0	0/0:37,0:36:93.32:0,93,3824	0/1:19,2:21:56.93:603,0,57	1/1:15,1:16:15.84:495,16,0	0/0:38,0:38:81.23:0,81,3149	0/0:42,0:42:84.29:0,84,4154	0/0:25,0:25:48.14:0,48,2055	1/1:16,6:22:42.14:1164,42,0	0/1:15,7:20:99:1071,0,100	0/0:48,0:48:93.91:0,94,4685	0/0:41,0:41:53.94:0,54,4028	1/1:18,4:17:12.04:455,12,0	0/1:25,6:30:32.37:800,0,32	1/1:52,2:51:6.06:1076,6,0	0/0:31,0:31:57.48:0,57,2847	0/0:17,0:18:42.12:0,42,1534	0/0:50,0:51:96.28:0,96,5766	0/1:24,2:25:99:605,0,173	0/0:30,0:29:58.08:0,58,2377	0/1:14,1:15:40.59:356,0,41	0/0:5,0:5:15.05:0,15,930
chr10	78763611	.	AAC	A	624.47	PASS	AB=0.991;AC=12;AF=0.214;AN=56;BaseQRankSum=10.252;DP=842;FS=16.578;HRun=0;HaplotypeScore=228.8314;InbreedingCoeff=0.0753;MQ=50.29;MQ0=23;MQRankSum=-3.868;QD=2.74;ReadPosRankSum=-5.326;VQSLOD=0.0185;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,102,1660	1/1:11,0:9:2.62:13,3,0	0/0:47,0:18:30.09:0,30,473	0/0:45,0:14:20.17:0,20,351	0/0:13,0:13:19.02:0,19,157	0/0:25,0:25:69.17:0,69,1123	0/0:30,0:30:66.20:0,66,1074	0/0:36,0:35:20.10:0,20,219	0/0:40,0:39:99:0,114,1876	0/1:18,0:18:69.99:70,0,174	0/1:14,0:14:7.48:7,0,108	0/0:33,0:33:87.24:0,87,1428	0/0:38,0:38:96.33:0,96,1600	0/0:34,0:34:87.26:0,87,1399	0/1:20,0:20:66.83:78,0,67	0/1:25,0:22:48.54:135,0,49	0/0:45,2:47:38.56:0,39,1804	0/0:31,0:31:72.07:0,72,1326	1/1:19,1:12:7.88:56,8,0	0/1:27,0:27:74.21:74,0,198	0/1:49,4:50:99:219,0,116	0/0:34,0:34:90.40:0,90,1304	0/0:22,0:21:57.18:0,57,887	0/0:53,1:54:99:0,133,2161	0/1:22,0:21:21.42:21,0,256	0/0:35,0:33:81.18:0,81,1247	0/1:18,0:17:94.07:101,0,94	0/0:11,0:11:33.11:0,33,556
chr10	78763622	.	A	AAG	2529.64	PASS	AB=0.961;AC=13;AF=0.232;AN=56;BaseQRankSum=11.521;DP=888;FS=123.202;HRun=0;HaplotypeScore=227.5361;InbreedingCoeff=-0.1635;MQ=49.97;MQ0=24;MQRankSum=-4.268;QD=8.91;ReadPosRankSum=-1.313;VQSLOD=0.7501;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:92.63:0,93,1764	1/1:7,0:7:2.98:22,3,0	0/0:55,0:17:39.02:0,39,572	0/0:53,0:18:6.64:0,7,427	0/1:14,1:15:53.59:193,0,54	0/0:25,0:25:75.21:0,75,1188	0/0:25,0:25:66.23:0,66,1073	0/1:30,0:29:99:325,0,554	0/0:44,0:43:99:0,126,2032	0/1:19,0:20:67.81:68,0,446	0/1:11,2:13:73.27:213,0,73	0/0:35,0:35:96.28:0,96,1524	0/0:39,0:39:99:0,108,1720	0/0:33,0:32:90.29:0,90,1431	0/1:25,1:26:99:431,0,275	0/1:26,1:27:99:331,0,482	0/0:48,0:48:99:0,130,1997	0/0:34,0:34:86.78:0,87,1437	0/1:18,0:9:71:71,0,87	0/1:33,0:33:99:287,0,189	0/1:50,7:57:99:476,0,555	0/0:36,0:36:59.18:0,59,1283	0/0:23,0:22:60.07:0,60,937	0/0:58,0:58:99:0,149,2382	0/1:19,1:19:99:206,0,295	0/0:40,0:38:99:0,102,1595	0/1:17,0:16:58.90:59,0,253	0/0:13,0:13:39.13:0,39,622
chr10	78763647	.	C	CAT	1761.89	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.414;DP=920;FS=3.547;HRun=0;HaplotypeScore=187.6168;InbreedingCoeff=0.8996;MQ=50.85;MQ0=14;MQRankSum=1.778;QD=44.05;ReadPosRankSum=0.591;VQSLOD=3.4502;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,106,1599	0/0:8,0:8:5.97:0,6,50	0/0:62,0:24:55.14:0,55,741	0/0:58,0:27:36.22:0,36,594	0/0:17,0:17:27.07:0,27,379	0/0:26,0:26:75.01:0,75,992	0/0:27,0:27:75.17:0,75,1021	0/0:43,0:43:99:0,105,1344	1/1:13,27:37:99:1857,108,0	0/0:23,0:22:60.06:0,60,813	0/0:11,0:11:30.10:0,30,413	0/0:27,0:27:75.06:0,75,1004	0/0:36,0:36:99:0,102,1391	0/0:42,0:41:99:0,114,1566	0/0:32,0:32:72.18:0,72,954	0/0:36,1:37:32.10:0,32,1090	0/0:39,0:39:86.80:0,87,1350	0/0:33,0:33:80.63:0,81,1166	0/0:33,0:27:70.72:0,71,877	0/0:24,0:24:63.07:0,63,735	0/0:56,0:56:79.96:0,80,1421	0/0:28,0:28:75.14:0,75,987	0/0:26,0:25:63.59:0,64,885	0/0:48,0:48:99:0,123,1803	0/0:15,0:14:21.05:0,21,256	0/0:38,0:38:99:0,114,1505	0/0:26,0:26:69.04:0,69,875	0/0:18,0:18:51.15:0,51,737
chr10	78763804	.	T	TG	1208.33	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.856;DP=887;FS=3.227;HRun=1;HaplotypeScore=94.6994;InbreedingCoeff=0.9989;MQ=83.11;MQ0=0;MQRankSum=-2.035;QD=37.76;ReadPosRankSum=2.832;VQSLOD=4.1800;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1303	0/0:10,0:10:30.10:0,30,389	0/0:27,0:27:75.68:0,76,940	0/0:31,0:31:75.21:0,75,1036	0/0:24,0:24:63.10:0,63,780	0/0:25,0:25:75.19:0,75,952	0/0:31,0:31:87.26:0,87,1102	0/0:48,0:48:99:0,138,1756	1/1:1,31:32:87.29:1303,87,0	0/0:32,0:32:87.24:0,87,1110	0/0:23,0:23:63.17:0,63,787	0/0:29,0:29:84.24:0,84,1061	0/0:38,0:38:99:0,114,1465	0/0:37,0:37:99:0,108,1370	0/0:45,0:45:99:0,123,1558	0/0:38,2:40:30.39:0,30,1354	0/0:34,0:33:99:0,102,1323	0/0:24,0:24:69.22:0,69,891	0/0:26,0:26:75.24:0,75,961	0/0:36,0:36:99:0,99,1181	0/0:39,0:39:99:0,114,1480	0/0:37,0:37:99:0,108,1382	0/0:28,0:28:72.23:0,72,930	0/0:31,0:31:93.24:0,93,1172	0/0:27,0:27:72.23:0,72,933	0/0:38,0:38:99:0,105,1333	0/0:45,0:45:99:0,132,1674	0/0:14,0:14:36.07:0,36,435
chr10	78765040	.	GCT	G	3217.88	PASS	AB=0.999;AC=20;AF=0.357;AN=56;BaseQRankSum=-4.641;DP=739;FS=1.429;HRun=0;HaplotypeScore=142.0567;InbreedingCoeff=-0.0941;MQ=65.62;MQ0=20;MQRankSum=-0.265;QD=7.01;ReadPosRankSum=0.876;VQSLOD=3.5273;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:15.32:0,15,273	1/1:15,0:15:10.43:219,10,0	0/0:39,0:21:39.63:0,40,394	0/0:26,0:11:17.58:0,18,115	0/1:25,0:25:23.36:256,0,23	0/0:13,0:13:23.96:0,24,257	0/0:24,0:24:50.81:0,51,514	1/1:8,19:25:20.10:460,20,0	0/0:33,0:35:78.60:0,79,759	0/1:29,0:29:18.36:464,0,18	0/1:23,0:22:53.60:154,0,54	0/1:19,0:19:20.89:21,0,127	0/1:20,0:19:10.77:11,0,195	0/0:35,0:35:77.43:0,77,950	1/1:38,1:39:16.61:379,17,0	0/1:33,0:31:72.59:123,0,73	0/1:27,0:27:50.61:51,0,195	0/1:24,0:24:24.04:24,0,243	0/1:23,0:20:18.32:192,0,18	0/1:17,0:16:4.35:75,0,4	0/1:65,1:66:68.22:650,0,68	0/0:20,0:20:1.07:0,1,195	0/0:20,0:20:12.37:0,12,248	0/1:25,0:25:20.74:21,0,234	0/1:19,0:17:47.19:120,0,47	0/0:26,0:26:71.62:0,72,814	0/1:28,0:28:33.80:172,0,34	0/0:21,0:21:31.83:0,32,636
chr10	78765041	.	C	CTG	3233.06	PASS	AB=0.906;AC=19;AF=0.339;AN=56;BaseQRankSum=3.705;DP=748;FS=15.795;HRun=0;HaplotypeScore=155.5586;InbreedingCoeff=0.3876;MQ=65.49;MQ0=20;MQRankSum=0.035;QD=8.42;ReadPosRankSum=-2.268;VQSLOD=1.9769;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:33.06:0,33,456	0/1:14,1:15:11.15:80,0,11	0/0:39,0:21:43.31:0,43,596	0/0:25,0:10:17.23:0,17,195	1/1:20,4:25:2.84:194,3,0	0/0:11,0:15:22.13:0,22,261	0/0:24,0:24:45.66:0,46,491	0/1:26,0:24:25.66:26,0,27	0/1:35,0:34:79.22:79,0,641	0/1:26,3:30:43.20:141,0,43	1/1:18,5:22:30.40:358,30,0	0/0:16,0:16:45.14:0,45,647	0/0:20,0:19:54.18:0,54,763	0/0:36,0:36:96.25:0,96,1317	1/1:27,12:39:16.58:624,17,0	0/1:23,10:32:31.38:545,0,31	0/0:27,0:27:68.90:0,69,954	0/0:24,0:24:66.05:0,66,953	1/1:21,1:19:7.65:114,8,0	1/1:12,5:17:8.44:133,8,0	0/1:65,4:69:33.26:274,0,33	0/0:21,0:21:48.13:0,48,708	0/0:20,0:20:48.16:0,48,700	0/0:26,0:26:66.11:0,66,915	0/1:14,5:17:22.06:163,0,22	0/0:27,0:27:78.25:0,78,1136	1/1:16,12:29:29.31:691,29,0	0/0:24,0:24:60.19:0,60,867
chr10	78765043	.	CTG	C	2026.66	PASS	AB=0.890;AC=17;AF=0.315;AN=54;BaseQRankSum=-7.310;DP=796;FS=2.172;HRun=0;HaplotypeScore=156.4302;InbreedingCoeff=0.5033;MQ=61.05;MQ0=22;MQRankSum=1.083;QD=7.26;ReadPosRankSum=2.220;VQSLOD=3.0144;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,1:26:68.37:68,0,107	0/0:17,0:17:9.48:0,9,98	0/0:35,0:17:0:0,0,1	./.	0/0:28,0:28:23.19:0,23,344	0/0:15,0:16:8.96:0,9,94	0/0:15,0:23:20.80:0,21,183	0/0:30,0:28:1.88:0,2,179	0/0:33,0:38:44.77:0,45,377	0/0:32,0:32:5.57:0,6,285	0/0:25,0:24:36.02:0,36,360	1/1:12,4:16:29.78:289,30,0	1/1:13,6:19:23.90:246,24,0	0/1:30,6:36:36.26:36,0,305	0/0:40,0:40:34.89:0,35,439	0/0:34,0:32:60.02:0,60,589	1/1:17,9:27:36.60:436,37,0	1/1:18,8:27:34.28:355,34,0	0/0:27,0:24:26.94:0,27,267	0/0:21,0:20:14.72:0,15,139	0/0:73,0:73:74.06:0,74,815	0/1:15,7:22:15.02:180,0,15	1/1:15,4:20:14.87:147,15,0	1/1:19,9:28:33.07:354,33,0	0/0:20,0:18:27.03:0,27,304	0/1:28,1:29:7.06:7,0,258	0/0:31,0:31:56.99:0,57,531	0/1:25,3:27:93.24:93,0,353
chr10	78765112	.	GTCTATCTATCTA	G	9768.59	PASS	AB=0.731;AC=23;AF=0.411;AN=56;BaseQRankSum=-3.500;DP=582;FS=3.855;HRun=0;HaplotypeScore=230.3669;InbreedingCoeff=0.8761;MQ=61.49;MQ0=4;MQRankSum=-9.047;QD=39.07;ReadPosRankSum=-3.541;VQSLOD=4.0747;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:30:53.19:0,53,2237	1/1:2,6:8:9.03:253,9,0	0/0:28,0:22:5.99:0,6,83	0/0:15,0:10:5.31:0,5,26	1/1:6,7:13:21.07:579,21,0	0/0:16,0:16:45.12:0,45,2036	0/0:10,0:10:24.07:0,24,965	1/1:19,13:32:38.51:628,39,0	0/0:15,0:28:30.09:0,30,1334	1/1:5,21:25:60.21:1865,60,0	1/1:4,9:13:9.03:172,9,0	0/0:11,0:26:57.17:0,57,1309	0/0:7,0:20:33.11:0,33,844	0/0:22,0:22:48.11:0,48,2415	1/1:8,22:30:36.12:1135,36,0	1/1:7,23:29:39.13:1325,39,0	0/0:18,0:18:33.70:0,34,1460	0/0:12,0:12:21.04:0,21,497	0/1:12,7:16:99:511,0,140	1/1:4,12:15:24.08:803,24,0	1/1:25,2:26:36.07:506,36,0	0/0:6,0:10:24.05:0,24,479	0/0:5,0:18:28.06:0,28,717	0/0:8,0:17:31.25:0,31,607	1/1:10,5:15:33.11:827,33,0	0/0:12,0:30:78.25:0,78,1857	1/1:9,11:20:39.08:1165,39,0	0/0:16,0:30:66.11:0,66,1371
chr10	78765203	.	T	TTCTA	7199.36	PASS	AB=0.946;AC=28;AF=0.609;AN=46;BaseQRankSum=-10.282;DP=625;FS=0.483;HRun=0;HaplotypeScore=124.5016;InbreedingCoeff=0.7645;MQ=51.61;MQ0=21;MQRankSum=-0.001;QD=20.87;ReadPosRankSum=-3.522;VQSLOD=4.0667;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,4:7:15.02:303,15,0	./.	./.	1/1:8,8:17:18.06:389,18,0	0/0:24,0:24:42.11:0,42,604	./.	./.	1/1:11,11:21:1.29:707,1,0	1/1:27,6:31:21.04:444,21,0	1/1:18,3:19:15.03:305,15,0	0/1:18,1:19:49.05:49,0,235	0/0:23,0:22:39.11:0,39,555	0/0:22,0:22:33.11:0,33,504	1/1:22,18:38:31.21:1060,31,0	1/1:26,11:36:39.13:828,39,0	1/1:14,11:24:24.08:537,24,0	0/0:4,0:18:36.03:0,36,331	1/1:17,0:15:12.91:164,13,0	0/0:34,0:34:45.14:0,45,669	1/1:7,6:11:18.04:343,18,0	1/1:8,11:20:21.07:473,21,0	0/0:27,0:27:33.11:0,33,508	0/1:15,1:16:37.22:37,0,415	1/1:9,9:18:24.08:562,24,0	0/0:16,0:37:50.85:0,51,451	1/1:15,20:37:45.09:997,45,0	0/0:12,0:26:18.02:0,18,168
chr10	78765294	.	TTCTA	T	9617.54	PASS	AB=0.761;AC=39;AF=0.780;AN=50;BaseQRankSum=3.562;DP=641;FS=9.738;HRun=0;HaplotypeScore=124.5469;InbreedingCoeff=0.6491;MQ=55.37;MQ0=11;MQRankSum=1.885;QD=18.89;ReadPosRankSum=1.904;VQSLOD=3.8848;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,7:21:99:334,0,111	1/1:5,11:16:27.09:404,27,0	./.	./.	1/1:26,9:34:30.10:460,30,0	1/1:16,7:22:30.10:435,30,0	0/0:7,0:7:12.03:0,12,235	./.	0/0:17,0:17:33.11:0,33,763	1/1:26,14:39:51.16:744,51,0	1/1:10,5:15:18.03:234,18,0	1/1:10,10:20:36.12:534,36,0	1/1:12,11:23:45.15:685,45,0	1/1:6,13:20:33.11:488,33,0	1/1:15,15:30:53.96:708,54,0	1/1:19,17:36:57.18:852,57,0	0/0:24,0:24:40.38:0,40,886	0/1:16,4:19:14.71:137,0,15	1/1:15,6:20:18.06:276,18,0	1/1:17,10:27:30.01:392,30,0	1/1:6,6:12:18.06:276,18,0	1/1:16,5:21:21.07:322,21,0	1/1:12,10:22:24.01:340,24,0	0/0:16,0:16:30.01:0,30,598	1/1:9,17:24:33.11:506,33,0	0/1:16,12:27:8.48:575,0,8	1/1:13,15:29:45.07:660,45,0	1/1:20,3:24:18.05:258,18,0
chr10	78765388	.	TTCTATCTA	T	3467.06	PASS	AB=0.933;AC=27;AF=0.643;AN=42;BaseQRankSum=1.973;DP=536;FS=0.000;HRun=0;HaplotypeScore=180.9257;InbreedingCoeff=0.5301;MQ=49.54;MQ0=14;MQRankSum=-4.586;QD=10.41;ReadPosRankSum=1.017;VQSLOD=2.2542;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,2:15:13.98:14,0,46	./.	./.	./.	0/0:21,0:21:18.01:0,18,221	1/1:22,0:25:18.68:255,19,0	./.	0/0:31,0:24:0:0,0,0	0/1:21,0:21:6.90:7,0,176	1/1:25,4:28:27.09:561,27,0	./.	1/1:20,3:23:12.01:252,12,0	1/1:22,3:25:30.10:613,30,0	0/0:24,0:24:36.11:0,36,1347	1/1:22,2:24:5.89:103,6,0	1/1:30,8:37:17.95:299,18,0	0/0:28,0:29:30.08:0,30,949	0/1:10,1:11:6.56:196,0,7	1/1:13,2:13:4.70:121,5,0	1/1:11,6:17:6.02:142,6,0	./.	1/1:17,1:18:3.01:74,3,0	1/1:18,4:21:9.03:203,9,0	./.	1/1:18,0:18:6.02:112,6,0	0/0:23,0:29:38.94:0,39,361	1/1:27,5:30:29.88:514,30,0	0/0:13,0:12:6:0,6,52
chr10	78765438	.	C	CG	862.78	PASS	AB=0.849;AC=14;AF=0.250;AN=56;BaseQRankSum=8.789;DP=510;FS=19.703;HRun=0;HaplotypeScore=152.9268;InbreedingCoeff=-0.1987;MQ=46.46;MQ0=17;MQRankSum=-5.176;QD=3.34;ReadPosRankSum=-4.352;VQSLOD=0.9711;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:1.07:0,1,231	0/0:6,1:7:17.71:0,18,123	0/1:10,0:7:5.21:5,0,133	0/0:7,0:3:9.03:0,9,126	0/0:12,1:13:26.85:0,27,246	0/1:23,0:23:43.41:81,0,43	0/0:14,1:15:0.07:0,0,79	0/0:33,0:19:53.92:0,54,658	0/0:24,0:24:15.03:0,15,188	0/1:21,5:25:99:108,0,306	0/0:8,1:9:11.93:0,12,120	0/1:15,3:18:64.42:64,0,292	0/1:22,9:31:99:205,0,325	0/0:28,0:28:81.25:0,81,1113	1/1:17,2:19:20.15:127,20,0	0/1:27,9:35:75.05:75,0,246	0/0:27,0:27:69.11:0,69,892	0/1:14,2:16:30.09:30,0,346	0/1:14,2:11:5.15:5,0,184	0/1:16,3:17:66.65:67,0,130	0/0:19,0:17:6.02:0,6,72	0/0:8,3:10:3.06:0,3,121	0/1:11,3:14:43.09:43,0,151	0/0:8,0:7:9.03:0,9,125	0/1:6,5:11:41.31:41,0,126	0/0:26,0:25:71.61:0,72,748	0/1:13,6:19:53.54:164,0,54	0/0:10,0:10:29.96:0,30,371
chr10	78765439	.	TATCTATC	T	1962.73	PASS	AB=0.936;AC=17;AF=0.304;AN=56;BaseQRankSum=7.105;DP=510;FS=3.274;HRun=0;HaplotypeScore=185.1332;InbreedingCoeff=-0.0597;MQ=46.27;MQ0=16;MQRankSum=-4.308;QD=6.84;ReadPosRankSum=1.816;VQSLOD=2.6256;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:20.94:0,21,247	0/1:7,0:7:0.32:0,0,1	0/0:10,0:7:7.03:0,7,222	0/0:7,0:3:9.03:0,9,125	0/0:15,0:15:20.02:0,20,158	0/1:16,5:21:74.24:251,0,74	0/0:16,0:15:4.07:0,4,51	0/0:32,0:19:41.99:0,42,483	0/1:24,0:24:3.94:4,0,111	0/1:26,0:25:76.31:314,0,76	0/0:9,0:9:6.02:0,6,84	0/1:15,3:18:27.74:153,0,28	0/1:24,6:30:9.29:417,0,9	0/0:28,0:28:81.21:0,81,2084	0/1:19,0:19:31.19:31,0,148	1/1:36,0:35:12.27:266,12,0	0/0:28,0:28:72.23:0,72,1492	0/1:15,1:16:99:110,0,100	0/1:16,0:11:69.24:69,0,69	0/1:19,0:17:17.51:49,0,18	0/0:20,0:18:1.41:0,1,2	0/1:10,2:11:23.06:23,0,76	0/1:11,2:13:99:102,0,108	0/0:8,0:7:1.41:0,1,2	0/1:11,0:11:33.40:62,0,33	0/0:26,0:25:72.06:0,72,785	1/1:18,0:19:25.28:269,25,0	0/0:10,0:10:30.05:0,30,405
chr10	78765441	.	TCTATC	T	1784.29	PASS	AB=0.930;AC=18;AF=0.321;AN=56;BaseQRankSum=9.364;DP=507;FS=3.656;HRun=0;HaplotypeScore=172.6397;InbreedingCoeff=-0.2938;MQ=45.99;MQ0=15;MQRankSum=-4.071;QD=5.76;ReadPosRankSum=1.004;VQSLOD=2.8225;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:18.05:0,18,258	0/1:6,1:7:0.79:1,0,6	0/0:10,0:7:1.80:0,2,237	0/0:8,0:3:9.03:0,9,139	0/0:14,1:15:5.47:0,5,14	0/1:22,0:21:66.46:233,0,66	0/1:15,1:15:14.08:14,0,37	0/0:31,0:20:1.58:0,2,465	0/1:24,0:24:13.37:13,0,39	0/1:22,5:26:75.74:308,0,76	0/1:9,1:10:17.73:18,0,83	0/1:19,0:19:82.06:108,0,82	0/1:29,0:29:77.09:348,0,77	0/0:28,0:28:79.14:0,79,1779	0/1:17,1:18:28.35:28,0,148	0/1:29,8:36:1.07:279,0,1	0/0:28,0:28:69.29:0,69,1257	0/1:15,0:15:72:72,0,150	0/1:12,2:12:56.81:57,0,125	0/1:17,2:17:14.74:42,0,15	0/0:20,0:18:1.92:0,2,17	0/1:12,0:11:18.64:19,0,101	0/1:13,0:13:77.71:78,0,132	0/0:8,0:7:7.87:0,8,32	0/1:7,3:10:34.17:70,0,34	0/0:26,0:25:51.86:0,52,623	1/1:13,5:18:26.77:251,27,0	0/0:10,0:10:26.94:0,27,352
chr10	78765442	.	CTATCGTGT	C	347.49	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-1.708;DP=502;FS=28.444;HRun=0;HaplotypeScore=196.1123;InbreedingCoeff=-0.0203;MQ=47.21;MQ0=14;MQRankSum=1.186;QD=1.97;ReadPosRankSum=-2.584;VQSLOD=0.9369;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:17.85:0,18,379	0/0:6,0:7:18.06:0,18,322	0/0:11,0:8:16.65:0,17,275	0/0:8,0:3:9.03:0,9,202	0/1:14,0:14:99:110,0,201	0/0:21,0:20:40.25:0,40,416	0/0:16,0:15:23.88:0,24,324	0/0:30,0:21:34:0,34,589	1/1:0,22:22:6.02:160,6,0	0/0:27,0:26:17.44:0,17,690	0/0:10,0:10:15.05:0,15,305	0/0:18,0:18:4.51:0,5,426	0/1:28,0:28:24.95:25,0,619	0/0:28,0:28:35.49:0,35,2298	0/0:19,0:19:47.06:0,47,412	0/0:34,0:36:38.99:0,39,1030	0/0:27,0:27:23.84:0,24,1505	0/0:11,0:15:9.67:0,10,550	0/1:14,0:12:0.85:1,0,371	0/1:17,0:16:6.78:7,0,306	0/0:18,0:18:9.03:0,9,158	0/1:11,0:11:6.89:7,0,337	0/1:13,0:14:9.16:9,0,365	0/0:8,0:7:9.03:0,9,158	0/1:10,0:10:0.88:1,0,338	0/1:27,0:26:99:152,0,1082	0/1:17,0:17:3.62:4,0,425	0/0:10,0:10:29.83:0,30,589
chr10	78765443	.	TATC	T	1114.70	PASS	AB=0.956;AC=20;AF=0.357;AN=56;BaseQRankSum=7.303;DP=499;FS=0.000;HRun=0;HaplotypeScore=160.3120;InbreedingCoeff=0.0093;MQ=47.10;MQ0=14;MQRankSum=-2.542;QD=3.94;ReadPosRankSum=3.126;VQSLOD=2.6226;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:21.03:0,21,268	0/1:7,1:8:0.32:0,0,1	0/0:12,0:9:13.03:0,13,286	0/0:9,0:3:9.03:0,9,125	1/1:14,0:14:6.92:51,7,0	0/1:21,0:20:99:118,0,100	0/0:16,0:15:4.20:0,4,62	0/0:30,0:21:43.13:0,43,485	1/1:22,0:22:3.44:21,3,0	0/1:26,0:25:80.77:188,0,81	0/1:10,0:10:16.34:16,0,75	0/1:18,0:18:31.07:70,0,31	0/1:27,0:27:16.58:208,0,17	0/0:28,0:28:75.26:0,75,1414	0/1:18,1:19:49.48:49,0,186	1/1:35,3:37:11.47:247,11,0	0/0:27,0:27:58.55:0,59,983	0/1:10,4:14:33.14:33,0,78	0/1:14,0:12:38.19:38,0,108	0/0:16,1:15:5.27:0,5,29	0/0:17,2:17:1.41:0,1,2	0/1:11,1:11:18.66:19,0,76	0/1:12,1:13:30.19:30,0,111	0/0:7,0:6:1.41:0,1,2	0/1:10,0:10:35.62:36,0,37	0/0:27,0:26:15.98:0,16,532	1/1:17,0:17:14.42:154,14,0	0/0:10,0:10:21.78:0,22,309
chr10	78765446	.	C	CGT	5132.01	PASS	AB=0.860;AC=36;AF=0.643;AN=56;BaseQRankSum=6.756;DP=542;FS=7.746;HRun=0;HaplotypeScore=162.8484;InbreedingCoeff=0.4886;MQ=46.66;MQ0=12;MQRankSum=-2.611;QD=12.31;ReadPosRankSum=-1.956;VQSLOD=3.8765;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:15:23.88:0,24,248	1/1:8,0:8:17.99:174,18,0	0/0:15,0:9:8.57:0,9,119	0/0:9,0:3:6.02:0,6,69	1/1:12,0:13:13.74:94,14,0	1/1:13,0:21:35.70:230,36,0	1/1:11,0:18:27.53:198,28,0	1/1:24,2:26:32.95:312,33,0	0/0:22,0:22:5.68:0,6,28	1/1:27,0:29:56.19:445,56,0	0/1:11,0:11:55.63:66,0,56	0/1:7,11:19:5.39:358,0,5	1/1:12,15:28:17.91:589,18,0	0/0:27,0:28:66.02:0,66,744	1/1:10,0:22:32.41:164,32,0	1/1:35,1:39:73.08:714,73,0	0/0:23,0:24:23.68:0,24,500	0/1:10,5:15:28.71:423,0,29	1/1:15,1:13:23.74:214,24,0	1/1:22,0:21:20.98:198,21,0	1/1:6,1:19:9.02:121,9,0	0/1:10,2:11:52.60:150,0,53	0/1:15,1:16:99:147,0,111	1/1:3,6:9:5.92:137,6,0	1/1:11,1:12:23.50:214,24,0	0/1:29,0:29:6.42:6,0,551	1/1:15,0:17:20.19:177,20,0	0/0:11,0:12:29.92:0,30,323
chr10	78766340	.	TCA	T	11512.81	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=5.078;DP=739;FS=8.021;HRun=0;HaplotypeScore=114.3318;InbreedingCoeff=0.9976;MQ=77.23;MQ0=3;MQRankSum=-2.207;QD=36.43;ReadPosRankSum=-0.381;VQSLOD=6.3111;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,175,3140	1/1:0,5:5:15.05:215,15,0	0/0:19,0:19:54.18:0,54,931	0/0:18,0:18:48.16:0,48,838	1/1:0,26:26:66.15:920,66,0	0/0:33,0:33:99:0,99,1720	0/0:16,0:16:48.16:0,48,872	1/1:1,33:34:99:1400,99,0	0/0:22,0:22:63.20:0,63,1116	1/1:2,29:30:84.28:1203,84,0	1/1:2,15:17:39.13:559,39,0	0/0:32,0:32:96.33:0,96,1760	0/0:26,0:26:75.26:0,75,1374	0/0:26,0:26:75.26:0,75,1373	1/1:2,25:27:75.25:1074,75,0	1/1:3,22:24:60.20:860,60,0	0/0:35,0:35:99:0,105,1918	0/0:24,0:24:69.22:0,69,1222	1/1:2,22:24:63.18:844,63,0	1/1:2,28:30:84.27:1175,84,0	1/1:1,53:54:99:1848,129,0	0/0:18,0:18:42.14:0,42,763	0/0:18,0:18:42.14:0,42,769	0/0:42,0:42:99:0,123,2245	1/1:1,18:18:36.11:515,36,0	0/0:24,1:25:32.29:0,32,1248	1/1:1,23:23:63.01:901,63,0	0/0:11,0:11:27.09:0,27,495
chr10	78766677	.	TCA	T	974.91	PASS	AB=0.933;AC=24;AF=0.480;AN=50;BaseQRankSum=-0.350;DP=581;FS=0.837;HRun=0;HaplotypeScore=105.5341;InbreedingCoeff=0.3953;MQ=71.82;MQ0=32;MQRankSum=1.580;QD=2.93;ReadPosRankSum=1.368;VQSLOD=2.3045;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:4.78:0,5,38	./.	./.	./.	1/1:11,0:11:0.47:1,0,0	0/1:23,0:22:46.28:46,0,142	0/1:28,1:28:18.06:18,0,152	0/0:28,0:27:3.43:0,3,19	1/1:24,0:21:2.49:6,2,0	0/0:17,0:16:9.62:0,10,34	1/1:8,0:7:2.04:6,2,0	1/1:20,5:25:17.45:235,17,0	1/1:14,1:15:21.05:227,21,0	0/0:15,0:15:11.33:0,11,160	0/0:21,0:19:8.32:0,8,38	0/1:11,0:24:0.33:0,0,0	0/1:30,0:29:14.92:15,0,171	1/1:16,0:17:17.74:69,18,0	0/1:16,0:15:0:0,0,0	0/0:16,0:15:2.37:0,2,8	0/1:38,0:35:2.14:2,0,9	1/1:9,12:20:10.13:158,10,0	1/1:4,10:14:6.02:66,6,0	1/1:29,3:30:26.55:278,27,0	0/0:16,0:15:7.61:0,8,30	0/0:17,0:16:11.72:0,12,77	0/0:11,0:9:4.19:0,4,16	0/0:3,0:2:2.98:0,3,22
chr10	78766716	.	CAT	C	2882.27	PASS	AB=0.968;AC=33;AF=0.660;AN=50;BaseQRankSum=0.511;DP=631;FS=0.926;HRun=0;HaplotypeScore=129.7128;InbreedingCoeff=-0.5010;MQ=44.51;MQ0=76;MQRankSum=5.704;QD=4.68;ReadPosRankSum=1.237;VQSLOD=3.0600;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:32:9.83:89,0,10	0/1:4,0:3:1.84:20,0,2	./.	./.	1/1:12,0:10:6.17:63,6,0	0/1:28,0:23:18.50:222,0,19	0/1:38,0:33:77.76:107,0,78	0/1:18,0:16:51.33:51,0,85	0/1:29,0:24:43.66:101,0,44	1/1:22,0:17:12.64:243,13,0	1/1:12,0:8:15.77:112,16,0	0/1:31,0:31:32.30:202,0,32	1/1:17,1:16:16.75:100,17,0	0/1:32,0:28:75.51:76,0,116	0/1:10,11:17:14.83:22,0,15	0/1:32,0:26:26.91:27,0,108	0/1:31,0:30:99:186,0,99	0/1:37,0:32:61.17:198,0,61	0/1:12,3:11:19.22:19,0,48	./.	1/1:47,0:35:43.40:380,43,0	1/1:20,0:17:14.95:56,15,0	0/1:24,0:20:29.41:65,0,29	0/1:37,0:33:34.36:164,0,34	1/1:26,0:22:20.42:241,20,0	0/1:17,0:13:56.04:59,0,56	1/1:16,0:13:29.08:192,29,0	0/1:10,0:8:14.75:37,0,15
chr10	78766718	.	TAC	T	580.84	PASS	AB=0.981;AC=24;AF=0.480;AN=50;BaseQRankSum=1.938;DP=626;FS=3.945;HRun=0;HaplotypeScore=138.7952;InbreedingCoeff=-0.0941;MQ=44.72;MQ0=76;MQRankSum=1.641;QD=1.36;ReadPosRankSum=0.145;VQSLOD=2.6016;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:33:4.19:0,4,89	1/1:4,0:3:0.47:1,0,0	./.	./.	0/1:12,0:11:3.72:8,0,4	1/1:26,0:21:7.12:26,7,0	0/1:39,0:34:9.83:21,0,10	1/1:17,0:15:2.49:9,2,0	0/1:29,0:24:14.56:15,0,108	0/1:22,0:17:26.99:83,0,27	1/1:12,0:8:10.36:69,10,0	0/0:29,0:29:11.99:0,12,119	0/1:18,1:17:16.42:16,0,87	0/0:31,0:27:1.29:0,1,201	0/0:19,0:15:5.72:0,6,51	0/1:33,0:27:13.54:14,0,178	0/1:31,0:30:73.94:74,0,197	0/0:37,1:33:4.71:0,5,188	0/0:12,0:8:2.80:0,3,13	./.	1/1:45,2:35:12.81:105,13,0	0/1:20,0:17:0.71:1,0,42	0/1:25,0:21:29.94:30,0,79	0/1:36,3:33:99:116,0,192	0/1:25,1:22:14.48:14,0,33	0/0:17,0:13:15.02:0,15,160	1/1:14,1:13:8.15:81,8,0	0/1:10,0:8:45.41:45,0,52
chr10	78768327	.	G	GA	4085.84	PASS	AB=0.888;AC=26;AF=0.481;AN=54;BaseQRankSum=-2.326;DP=524;FS=4.845;HRun=10;HaplotypeScore=86.9693;InbreedingCoeff=0.7513;MQ=80.29;MQ0=0;MQRankSum=-1.446;QD=15.08;ReadPosRankSum=-4.855;VQSLOD=2.7868;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:33,13:46:15.06:0,15,415	1/1:0,5:5:15.04:160,15,0	0/0:15,0:15:17.91:0,18,142	0/1:14,0:14:1.38:1,0,114	1/1:11,12:23:41.79:354,42,0	0/0:26,0:26:40.02:0,40,383	0/0:24,0:24:19.09:0,19,358	1/1:6,25:31:53.39:709,53,0	0/0:25,0:25:44.77:0,45,366	1/1:1,9:10:24.06:256,24,0	1/1:6,6:12:20.96:199,21,0	0/0:15,0:15:26.87:0,27,217	0/0:12,0:12:23.90:0,24,195	0/0:14,0:14:35.93:0,36,295	1/1:4,16:20:39.10:415,39,0	1/1:3,15:19:39.03:401,39,0	0/0:24,1:25:34.04:0,34,485	0/0:17,0:17:41.94:0,42,345	0/1:4,18:22:9.77:463,0,10	1/1:10,3:13:23.93:212,24,0	1/1:7,14:21:18.04:186,18,0	0/1:24,0:24:7.41:7,0,260	0/0:13,0:13:26.94:0,27,222	0/0:19,0:21:49.97:0,50,400	1/1:8,15:25:47.70:422,48,0	0/1:15,0:15:4.94:5,0,118	1/1:3,13:15:8.44:295,8,0	./.
chr10	78769052	.	ACTGCCGGTCATGCCCTCTAGTCTCACTGTCATCT	A	710.62	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.989;DP=660;FS=2.214;HRun=0;HaplotypeScore=510.6829;InbreedingCoeff=0.8345;MQ=81.34;MQ0=0;MQRankSum=-2.982;QD=27.33;ReadPosRankSum=1.528;VQSLOD=-0.2348;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,17453	0/0:8,0:8:24.08:0,24,2444	0/0:15,0:15:38.71:0,39,2074	0/0:20,0:20:54.13:0,54,3556	0/0:22,0:22:66.20:0,66,7116	1/1:0,7:7:3.01:269,3,0	1/1:0,19:19:6.02:539,6,0	0/0:21,0:21:57.13:0,57,3905	0/0:24,0:24:69.22:0,69,8384	0/0:22,0:22:66.22:0,66,6930	0/0:11,0:11:32.90:0,33,3136	0/0:31,0:31:93.31:0,93,12256	0/0:23,0:23:69.22:0,69,7996	0/0:28,0:28:78.24:0,78,8559	0/0:24,0:24:72.25:0,72,9442	0/0:23,0:23:69.22:0,69,8977	0/0:36,0:36:99:0,108,14217	0/0:35,0:35:99:0,105,12646	0/0:21,0:21:60.20:0,60,4415	0/0:15,0:15:45.13:0,45,4896	0/0:76,0:76:99:0,219,26345	0/0:14,0:14:39.13:0,39,3283	0/0:17,0:17:45.12:0,45,4795	0/0:28,0:28:78.27:0,78,9944	0/0:22,0:22:66.23:0,66,7809	0/0:21,0:21:57.19:0,57,6096	0/0:18,0:18:54.17:0,54,7477	0/0:10,0:10:30.10:0,30,3740
chr10	78771075	.	GA	G	5509.18	PASS	AB=0.920;AC=45;AF=0.804;AN=56;BaseQRankSum=6.896;DP=669;FS=1.274;HRun=13;HaplotypeScore=85.6284;InbreedingCoeff=0.4868;MQ=65.95;MQ0=1;MQRankSum=1.374;QD=9.00;ReadPosRankSum=3.246;VQSLOD=4.4083;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,4:28:19.03:19,0,424	1/1:1,14:16:23.70:250,24,0	0/1:18,1:12:7.67:8,0,75	0/1:18,0:11:1.99:2,0,55	1/1:7,19:26:47.15:337,47,0	1/1:8,24:32:15.15:368,15,0	1/1:5,24:32:16.42:417,16,0	1/1:12,18:33:30.45:351,30,0	0/1:17,2:19:2.81:3,0,280	1/1:4,24:30:43.16:444,43,0	1/1:2,24:28:28.48:354,28,0	1/1:2,1:29:50.39:161,50,0	1/1:2,0:22:42.78:124,43,0	0/0:17,2:19:10.02:0,10,375	0/1:17,3:20:14.56:15,0,324	1/1:6,17:23:6.58:211,7,0	0/0:18,0:19:23.22:0,23,319	0/0:14,1:19:25.68:0,26,371	1/1:2,16:18:35.63:257,36,0	1/1:6,22:30:35.27:406,35,0	1/1:3,9:12:26.84:197,27,0	1/1:4,0:25:37.94:116,38,0	1/1:4,0:24:29.57:87,30,0	1/1:4,1:33:53.10:166,53,0	1/1:3,15:21:29.37:271,29,0	1/1:6,31:40:40.52:623,41,0	1/1:6,15:21:0.75:168,1,0	1/1:1,10:11:7.20:155,7,0
chr10	78773529	.	A	AAGG	7414.35	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=2.639;DP=692;FS=1.272;HRun=0;HaplotypeScore=117.9361;InbreedingCoeff=0.4360;MQ=68.09;MQ0=7;MQRankSum=1.764;QD=16.85;ReadPosRankSum=2.380;VQSLOD=4.8548;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,25:43:44.98:859,45,0	0/1:14,0:14:1.76:247,0,2	0/0:38,0:25:10.15:0,10,120	0/0:33,0:22:13.54:0,14,232	0/1:20,0:20:65.95:295,0,66	0/0:28,0:28:59.98:0,60,767	0/0:29,0:29:78.25:0,78,1079	0/1:27,0:26:90.29:159,0,90	0/0:25,0:25:54.17:0,54,732	0/1:23,0:22:25.03:353,0,25	0/1:16,0:16:25.64:299,0,26	1/1:5,16:22:30.10:603,30,0	1/1:15,15:30:27.09:531,27,0	0/0:31,0:31:69.02:0,69,929	1/1:36,0:36:32.89:418,33,0	0/1:32,0:32:9.24:518,0,9	0/0:20,0:20:39.13:0,39,543	0/0:18,0:18:48.16:0,48,668	0/1:21,0:21:3.28:231,0,3	0/1:17,0:17:8.49:165,0,8	1/1:19,0:19:3.30:282,3,0	1/1:10,11:20:30.10:557,30,0	1/1:11,18:29:24.06:458,24,0	1/1:6,22:28:42.14:845,42,0	1/1:19,0:18:4.17:282,4,0	0/0:23,0:23:54.18:0,54,761	1/1:23,0:23:26.42:313,26,0	0/0:6,0:6:9.03:0,9,123
chr10	78773549	.	G	GGAA	10165.23	PASS	AB=0.994;AC=32;AF=0.571;AN=56;BaseQRankSum=9.211;DP=718;FS=1.489;HRun=0;HaplotypeScore=121.3510;InbreedingCoeff=0.5457;MQ=61.46;MQ0=16;MQRankSum=-0.227;QD=21.00;ReadPosRankSum=2.328;VQSLOD=4.7403;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:34:22.55:473,0,23	1/1:3,12:15:24.04:457,24,0	0/0:39,0:13:22.48:0,22,238	0/0:34,0:17:32.91:0,33,351	1/1:3,19:22:32.67:669,33,0	0/0:25,0:25:57.06:0,57,780	0/0:35,0:35:99:0,102,1254	1/1:32,0:31:59.89:599,60,0	0/1:24,0:24:66.33:66,0,227	1/1:18,8:25:56.76:884,57,0	1/1:4,14:18:32.61:575,33,0	1/1:19,0:19:7.12:322,7,0	0/1:24,0:25:99:282,0,129	0/0:29,0:29:84.06:0,84,1130	1/1:6,35:41:35.96:720,36,0	1/1:3,27:30:32.02:930,32,0	0/0:16,0:16:27.10:0,27,582	0/0:20,0:19:60.10:0,60,818	1/1:8,26:32:86.43:930,86,0	1/1:15,3:18:50.97:601,51,0	1/1:3,24:27:24.55:511,25,0	0/1:20,0:19:30.37:255,0,30	0/1:31,0:31:99:189,0,195	0/1:27,0:27:48.74:442,0,49	1/1:2,17:18:24.08:507,24,0	0/0:31,0:30:84.16:0,84,1030	1/1:17,4:21:53.93:753,54,0	0/0:5,0:5:12.03:0,12,169
chr10	78773620	.	TTC	T	2661.30	PASS	AB=0.959;AC=26;AF=0.464;AN=56;BaseQRankSum=14.157;DP=662;FS=20.169;HRun=0;HaplotypeScore=145.0045;InbreedingCoeff=0.7356;MQ=67.51;MQ0=10;MQRankSum=-9.136;QD=8.50;ReadPosRankSum=-2.078;VQSLOD=1.5798;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.21:0,93,1404	1/1:10,0:10:21.86:132,22,0	0/0:46,0:29:33.73:0,34,518	0/0:55,0:30:26.34:0,26,462	0/1:15,0:15:0:0,0,0	0/0:26,0:26:65.98:0,66,963	0/0:24,0:24:29.71:0,30,846	1/1:30,0:30:58.15:402,58,0	0/0:18,0:18:8.51:0,9,74	1/1:23,0:22:58.38:398,58,0	1/1:15,0:15:12.98:77,13,0	0/0:19,0:19:50.98:0,51,446	0/0:28,0:28:9.91:0,10,407	0/0:24,0:24:51.14:0,51,757	1/1:30,0:30:56.30:404,56,0	1/1:23,0:23:56.43:389,56,0	0/0:20,0:20:54.17:0,54,853	0/0:24,0:23:57.15:0,57,855	1/1:23,0:22:33.95:251,34,0	1/1:23,0:23:35.14:214,35,0	1/1:15,0:14:10.30:59,10,0	0/0:22,0:22:19.97:0,20,347	0/1:18,1:19:99:104,0,146	0/1:26,1:27:37.49:37,0,441	1/1:13,0:13:22.34:144,22,0	0/1:22,2:24:14.20:14,0,756	1/1:23,0:23:39.73:247,40,0	0/0:10,0:10:27.03:0,27,335
chr10	78773633	.	TCTCACA	T	10643.73	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=5.355;DP=645;FS=23.094;HRun=0;HaplotypeScore=159.8523;InbreedingCoeff=0.8996;MQ=57.17;MQ0=17;MQRankSum=-8.750;QD=43.09;ReadPosRankSum=-2.701;VQSLOD=2.8936;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.31:0,96,3187	1/1:4,7:11:24.08:567,24,0	0/0:41,0:20:44.27:0,44,1158	0/0:48,0:21:31.23:0,31,955	1/1:2,9:11:5.76:74,6,0	0/0:23,0:23:69.02:0,69,2239	0/0:27,0:27:78.23:0,78,2116	1/1:1,26:26:78.21:1533,78,0	0/0:24,0:24:8.96:0,9,68	1/1:1,24:24:69.19:1408,69,0	1/1:0,10:10:18.06:383,18,0	0/0:20,0:20:60.21:0,60,1528	0/0:27,0:27:53.53:0,54,1780	0/0:23,0:23:69.22:0,69,2037	1/1:11,18:29:58.58:1416,59,0	1/1:7,16:23:14.25:1394,14,0	0/0:22,0:22:63.22:0,63,2075	0/0:21,0:20:60.17:0,60,1914	1/1:13,8:20:51.01:829,51,0	1/1:0,24:24:39.13:899,39,0	1/1:9,6:14:21.07:389,21,0	0/0:25,0:25:50.52:0,51,1711	0/1:15,0:15:52.84:53,0,733	0/0:28,0:28:60.44:0,60,1879	1/1:6,9:15:39.13:811,39,0	0/0:24,0:24:69.23:0,69,1998	1/1:1,20:21:40.06:887,40,0	0/0:11,0:11:33.07:0,33,806
chr10	78773750	.	GA	G	4583.28	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=8.898;DP=503;FS=2.828;HRun=1;HaplotypeScore=55.6923;InbreedingCoeff=0.9758;MQ=82.08;MQ0=0;MQRankSum=-0.517;QD=26.49;ReadPosRankSum=-2.110;VQSLOD=4.1671;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.02:0,57,736	1/1:5,0:5:14.92:144,15,0	0/0:18,0:17:34.99:0,35,498	0/0:19,0:17:41.94:0,42,421	1/1:0,10:10:23.90:241,24,0	0/0:12,0:12:32.83:0,33,422	0/0:31,0:31:68.69:0,69,1127	1/1:0,14:14:32.95:312,33,0	0/0:16,1:17:9.19:0,9,540	1/1:1,10:11:27:285,27,0	1/1:2,4:6:9.03:125,9,0	0/0:25,0:25:70.55:0,71,925	0/0:16,0:16:48.13:0,48,637	0/0:19,0:19:57.18:0,57,773	1/1:0,24:23:63.19:855,63,0	1/1:0,20:20:48.16:669,48,0	0/0:32,0:32:96.29:0,96,1313	0/0:33,0:33:90.28:0,90,1263	1/1:1,17:18:47.96:546,48,0	1/1:2,12:14:17.80:200,18,0	1/1:0,18:17:15.05:209,15,0	0/0:13,0:13:33.11:0,33,461	0/0:17,0:17:24.04:0,24,342	0/0:31,0:31:90.30:0,90,1280	1/1:0,11:11:21.07:293,21,0	0/0:19,0:19:51.16:0,51,704	1/1:0,22:21:50.87:703,51,0	0/0:6,0:6:18.05:0,18,239
chr10	78774511	.	C	CT	3868.67	PASS	AB=0.728;AC=18;AF=0.321;AN=56;BaseQRankSum=-9.757;DP=654;FS=9.524;HRun=11;HaplotypeScore=89.6788;InbreedingCoeff=0.8680;MQ=72.03;MQ0=3;MQRankSum=-0.609;QD=16.60;ReadPosRankSum=-0.162;VQSLOD=3.7492;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:31:57.03:0,57,165	1/1:5,9:15:29.83:276,30,0	0/0:29,0:18:34.66:0,35,240	0/0:24,0:17:20.23:0,20,144	1/1:7,26:35:76.02:718,76,0	1/1:5,16:21:18.85:373,19,0	1/1:4,8:14:26.72:242,27,0	0/0:22,0:24:49.65:0,50,341	0/0:2,0:23:34.62:0,35,100	1/1:7,22:30:24.95:579,25,0	1/1:7,16:23:45.56:457,46,0	0/0:5,0:26:38.69:0,39,112	0/0:5,0:14:18.31:0,18,53	0/0:24,0:25:48.23:0,48,433	1/1:4,17:21:18.85:373,19,0	1/1:6,18:25:30.79:478,31,0	0/0:25,0:26:70.77:0,71,540	0/0:24,0:24:59.75:0,60,464	0/0:18,0:18:44.78:0,45,346	0/0:28,2:30:44.15:0,44,520	0/0:12,0:12:32.87:0,33,255	0/0:1,0:20:37.69:0,38,108	0/0:2,0:24:43.28:0,43,139	0/0:2,0:21:38.70:0,39,112	0/1:4,17:20:1.36:351,0,1	0/1:25,3:28:22.44:22,0,385	0/0:26,0:28:64.89:0,65,527	0/0:19,0:21:54.87:0,55,407
chr10	78774909	.	A	ATG	3749.21	PASS	AB=0.870;AC=25;AF=0.446;AN=56;BaseQRankSum=0.011;DP=625;FS=4.092;HRun=0;HaplotypeScore=134.4978;InbreedingCoeff=0.8690;MQ=49.36;MQ0=9;MQRankSum=-0.293;QD=13.89;ReadPosRankSum=-0.046;VQSLOD=3.0551;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:22.81:0,23,210	1/1:8,1:9:9.02:106,9,0	0/0:26,0:7:14.81:0,15,145	0/0:30,0:6:6.02:0,6,68	1/1:25,1:26:21.05:291,21,0	0/0:1,0:19:31.25:0,31,154	0/0:10,0:27:17.04:0,17,84	1/1:27,4:27:33.09:483,33,0	1/1:7,0:17:17.97:156,18,0	1/1:18,1:19:12.52:411,13,0	0/1:17,2:20:8.86:324,0,9	0/0:23,0:24:42.07:0,42,474	0/0:19,0:19:29.97:0,30,303	0/0:28,0:28:66.07:0,66,776	1/1:16,3:18:21.05:305,21,0	1/1:31,2:32:51.57:635,52,0	0/0:21,0:21:51.04:0,51,565	0/0:23,0:23:40.54:0,41,647	1/1:17,0:15:23.72:252,24,0	1/1:11,1:12:11.53:145,12,0	1/1:15,20:35:3.01:49,3,0	0/0:22,0:22:48.07:0,48,514	0/0:18,0:18:33.06:0,33,366	0/0:24,0:23:39.03:0,39,406	1/1:13,0:13:11.87:179,12,0	0/0:35,0:34:84.42:0,84,885	1/1:17,2:18:35.97:412,36,0	0/0:13,0:10:24.07:0,24,293
chr10	78774923	.	GTATA	G	306.45	PASS	AB=0.963;AC=9;AF=0.161;AN=56;BaseQRankSum=4.867;DP=609;FS=9.163;HRun=0;HaplotypeScore=151.2355;InbreedingCoeff=0.0005;MQ=45.38;MQ0=22;MQRankSum=-4.488;QD=2.30;ReadPosRankSum=-0.304;VQSLOD=1.6857;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:15.34:0,15,368	0/1:8,0:8:16.01:16,0,20	0/0:32,0:6:15.05:0,15,331	0/0:39,0:6:14.30:0,14,156	0/1:19,0:19:2.69:3,0,39	0/0:22,0:21:39.13:0,39,534	0/0:28,0:26:21.07:0,21,296	0/0:43,0:28:31.71:0,32,615	0/1:12,4:16:10.34:170,0,10	0/1:15,0:15:6.98:7,0,134	0/1:17,0:17:6.22:6,0,110	0/0:21,0:21:42.14:0,42,1039	0/0:14,0:14:30.09:0,30,547	0/0:29,0:29:78.27:0,78,1915	0/0:16,0:14:7.72:0,8,73	0/1:27,0:26:99:102,0,120	0/0:26,0:26:61.84:0,62,1530	0/0:23,0:23:66:0,66,1633	1/1:12,0:10:1.65:64,2,0	0/0:10,0:10:5.61:0,6,45	0/0:33,0:31:3.01:0,3,48	0/0:20,0:20:47.65:0,48,1050	0/0:15,0:15:33.10:0,33,755	0/0:24,0:23:39.60:0,40,883	0/0:9,0:9:1.56:0,2,8	0/0:38,0:36:99:0,105,2332	0/1:18,0:17:27.56:63,0,28	0/0:15,0:12:30.10:0,30,725
chr10	78774939	.	GTGTATA	G	2146.15	PASS	AB=0.983;AC=30;AF=0.536;AN=56;BaseQRankSum=8.635;DP=561;FS=3.988;HRun=0;HaplotypeScore=139.4994;InbreedingCoeff=0.4447;MQ=41.00;MQ0=39;MQRankSum=-3.176;QD=7.64;ReadPosRankSum=-3.291;VQSLOD=1.3943;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:11:11.99:140,12,0	1/1:6,1:7:6.01:80,6,0	0/1:37,0:8:36.36:36,0,282	0/0:42,0:7:14.06:0,14,204	1/1:14,1:14:4.62:94,5,0	0/0:22,0:21:38.74:0,39,1176	0/0:35,0:30:21.07:0,21,605	0/0:40,0:19:8.15:0,8,965	1/1:13,0:13:12.02:213,12,0	1/1:13,0:11:14.41:252,14,0	1/1:12,0:12:7.26:75,7,0	0/1:17,0:18:4.87:57,0,5	0/0:9,0:9:6.81:0,7,76	0/0:32,0:32:78.26:0,78,2364	1/1:14,1:13:13.28:164,13,0	1/1:19,0:19:21.80:351,22,0	0/0:24,0:24:63.15:0,63,1836	0/0:23,0:23:63.03:0,63,1872	0/1:7,0:6:60.19:183,0,60	1/1:7,1:8:5.65:109,6,0	1/1:26,2:23:2.80:7,3,0	0/1:17,0:16:67.04:68,0,67	0/1:14,0:14:53.90:54,0,100	0/1:18,0:18:16.47:16,0,83	1/1:9,0:7:2.85:49,3,0	0/0:40,0:34:86.09:0,86,2651	1/1:16,0:15:26.93:393,27,0	0/0:13,0:10:27.09:0,27,833
chr10	78774941	.	GTATA	G	2092.10	PASS	AB=0.946;AC=30;AF=0.536;AN=56;BaseQRankSum=7.528;DP=549;FS=3.256;HRun=0;HaplotypeScore=125.6495;InbreedingCoeff=0.4349;MQ=40.32;MQ0=38;MQRankSum=-2.385;QD=7.75;ReadPosRankSum=-4.582;VQSLOD=1.0013;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:11:12.04:168,12,0	1/1:1,5:6:6.02:93,6,0	0/1:36,1:9:46.82:47,0,254	0/0:40,0:6:15.04:0,15,204	1/1:3,11:13:4.25:94,4,0	0/0:22,0:21:38.72:0,39,1016	0/0:34,0:29:21.07:0,21,540	0/0:41,0:19:8.15:0,8,793	1/1:9,0:13:12.02:169,12,0	1/1:9,4:10:14.41:209,14,0	1/1:5,8:13:7.26:79,7,0	0/1:16,0:16:15.57:41,0,16	0/0:9,0:9:7.49:0,7,47	0/0:31,0:32:81.28:0,81,1991	1/1:6,9:13:13.28:164,13,0	1/1:3,14:17:21.82:319,22,0	0/0:24,0:24:63.14:0,63,1546	0/0:26,0:26:47.57:0,48,1504	0/1:4,3:6:42.54:204,0,43	1/1:1,6:7:5.61:93,6,0	1/1:25,1:21:1.55:4,2,0	0/1:16,0:15:9.47:93,0,9	0/1:13,0:13:52.97:53,0,62	0/1:19,0:18:17.23:17,0,59	1/1:6,3:7:2.85:49,3,0	0/0:40,0:34:89.10:0,89,2198	1/1:2,13:14:27.07:391,27,0	0/0:11,0:9:27.09:0,27,726
chr10	78774951	.	GTGTA	G	703.97	PASS	AB=0.990;AC=27;AF=0.482;AN=56;BaseQRankSum=8.808;DP=524;FS=25.853;HRun=0;HaplotypeScore=121.8407;InbreedingCoeff=0.5175;MQ=37.30;MQ0=44;MQRankSum=-1.121;QD=3.19;ReadPosRankSum=0.735;VQSLOD=0.7123;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:11:5.75:43,6,0	1/1:5,0:5:2.91:18,3,0	0/0:30,0:8:15.05:0,15,277	0/0:31,0:5:12.04:0,12,228	0/1:12,1:12:0.01:0,0,1	0/0:22,0:20:38.81:0,39,858	0/0:36,0:30:18.04:0,18,381	0/0:43,0:19:33.11:0,33,642	0/1:15,0:15:5.02:56,0,5	1/1:9,1:7:8.96:90,9,0	0/1:11,0:11:0.17:0,0,0	1/1:13,0:13:18.86:142,19,0	1/1:8,0:8:3.35:16,3,0	0/0:28,0:28:74.60:0,75,1765	0/0:10,0:9:0.89:0,1,2	1/1:21,2:23:9.58:87,10,0	0/0:25,0:25:60.12:0,60,1398	0/0:25,0:24:66.03:0,66,1391	0/1:8,0:6:21.73:22,0,72	0/1:10,0:10:22.99:23,0,66	1/1:20,0:17:2.15:13,2,0	1/1:12,0:11:17.92:141,18,0	0/1:12,0:11:12.21:47,0,12	1/1:19,0:17:12.18:96,12,0	0/1:12,0:9:0:0,0,0	0/0:41,0:33:90.26:0,90,2193	1/1:14,1:13:14.07:89,14,0	0/0:12,0:9:27.08:0,27,554
chr10	78774953	.	GTA	G	764.14	PASS	AB=0.896;AC=29;AF=0.518;AN=56;BaseQRankSum=8.645;DP=545;FS=27.421;HRun=0;HaplotypeScore=117.8881;InbreedingCoeff=0.4857;MQ=36.47;MQ0=44;MQRankSum=-0.565;QD=3.06;ReadPosRankSum=0.351;VQSLOD=1.0205;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:12:5.71:43,6,0	1/1:4,1:5:2.96:19,3,0	0/0:27,0:5:5.17:0,5,97	0/0:31,0:5:11.72:0,12,135	0/1:11,2:12:0.01:0,0,1	0/0:24,0:22:38.44:0,38,318	0/0:36,0:29:14.96:0,15,124	0/0:44,0:20:35.58:0,36,244	1/1:20,0:19:8.07:70,8,0	0/1:13,1:10:31.01:61,0,31	0/1:5,6:11:0:0,0,0	1/1:13,0:13:23.90:192,24,0	1/1:8,0:8:2.88:15,3,0	0/0:28,1:29:63.03:0,63,947	1/1:6,4:9:0.47:1,0,0	1/1:20,4:24:14.82:101,15,0	0/0:25,0:25:13.16:0,13,675	0/0:25,0:24:62.58:0,63,723	0/1:9,0:7:10.27:10,0,42	0/1:12,0:12:12.36:12,0,34	1/1:21,2:20:2.17:13,2,0	1/1:12,0:11:17.95:143,18,0	1/1:11,0:10:8.98:71,9,0	1/1:18,0:16:12.21:98,12,0	0/1:14,1:12:0.35:0,0,1	0/0:42,0:34:75.84:0,76,1230	0/1:14,2:15:13.04:90,0,13	0/0:12,0:9:17.96:0,18,230
chr10	78774957	.	A	ATG	379.75	PASS	AB=0.990;AC=20;AF=0.385;AN=52;BaseQRankSum=3.026;DP=580;FS=1.891;HRun=0;HaplotypeScore=128.4618;InbreedingCoeff=0.2885;MQ=35.32;MQ0=51;MQRankSum=-1.066;QD=1.36;ReadPosRankSum=-2.046;VQSLOD=2.3820;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:13:2.98:22,3,0	./.	0/0:27,0:5:4.96:0,5,23	0/0:30,0:5:3.01:0,3,36	0/0:18,0:16:0.47:0,0,1	1/1:20,2:21:20.86:287,21,0	1/1:34,2:30:3.01:46,3,0	0/1:48,1:25:26.63:44,0,27	0/0:21,0:20:9.17:0,9,61	0/1:17,0:12:19.02:19,0,43	0/0:13,0:12:0:0,0,0	1/1:14,0:14:1.39:3,1,0	0/0:8,0:8:0.89:0,1,2	0/0:32,0:32:55.19:0,55,620	0/1:12,0:11:0:0,0,0	0/1:25,1:26:1.19:1,0,6	0/0:24,0:24:29.34:0,29,474	0/0:26,0:25:38.95:0,39,403	0/1:9,0:7:20.24:31,0,20	0/0:14,0:12:1.36:0,1,3	1/1:33,0:28:0.18:1,0,0	1/1:12,0:11:4.59:28,5,0	./.	1/1:16,0:14:3.13:23,3,0	0/0:15,0:11:0:0,0,0	0/0:46,0:37:75.93:0,76,830	0/1:16,0:15:7.81:8,0,46	0/0:10,0:7:12.04:0,12,143
chr10	78774975	.	GTA	G	442.92	PASS	AB=0.976;AC=27;AF=0.500;AN=54;BaseQRankSum=5.136;DP=551;FS=0.000;HRun=0;HaplotypeScore=116.2075;InbreedingCoeff=0.0839;MQ=33.60;MQ0=60;MQRankSum=-0.895;QD=1.10;ReadPosRankSum=-4.836;VQSLOD=0.4973;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:17:4.91:30,5,0	0/0:4,0:4:2.04:0,2,6	0/0:7,0:2:5.62:0,6,27	0/0:10,0:1:2.98:0,3,21	1/1:13,0:11:0.14:0,0,0	1/1:19,0:18:0.81:108,1,0	1/1:38,0:31:1.68:20,2,0	0/1:35,0:24:76.21:76,0,98	0/0:24,0:23:8.30:0,8,33	0/1:23,0:15:13.04:13,0,85	1/1:14,0:13:2.04:6,2,0	1/1:12,0:12:11.93:98,12,0	0/1:9,0:9:9.22:9,0,12	0/0:32,0:30:11.99:0,12,744	0/0:15,0:13:0:0,0,0	0/1:23,3:24:5.03:6,0,5	0/1:28,0:26:16.53:17,0,542	0/1:24,0:22:15.70:16,0,459	0/1:11,0:8:4.86:5,0,123	0/1:19,0:15:7.95:8,0,33	0/1:49,0:37:0.11:0,0,0	1/1:12,0:10:11.98:98,12,0	./.	1/1:15,0:12:5.24:47,5,0	0/1:16,2:14:0.35:0,0,1	0/0:44,0:34:11.05:0,11,1075	0/1:14,1:14:27.92:28,0,44	0/0:9,0:6:14.11:0,14,179
chr10	78774991	.	GTGTA	G	382.97	PASS	AB=0.996;AC=21;AF=0.420;AN=50;BaseQRankSum=4.070;DP=584;FS=2.242;HRun=0;HaplotypeScore=133.3401;InbreedingCoeff=-0.0042;MQ=32.92;MQ0=72;MQRankSum=-4.205;QD=1.09;ReadPosRankSum=-3.022;VQSLOD=2.0278;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:18:2.08:19,2,0	0/0:9,1:10:4.85:0,5,18	./.	./.	1/1:15,1:13:4.40:19,4,0	0/1:19,0:17:23.09:29,0,23	0/0:43,0:32:2.53:0,3,6	0/1:45,0:33:99:101,0,176	0/1:23,1:23:8.82:21,0,9	0/1:27,0:19:53.40:53,0,165	1/1:13,0:12:0.89:2,1,0	0/0:11,0:10:2.46:0,2,17	0/1:9,0:8:8.14:8,0,31	0/1:33,0:30:5.63:6,0,755	1/1:20,0:18:1.75:42,2,0	1/1:27,2:27:11.06:70,11,0	0/0:30,0:27:33.28:0,33,713	0/1:22,0:18:7.11:7,0,474	0/1:12,0:9:16.61:25,0,17	0/1:21,0:16:10.98:11,0,46	0/0:55,0:42:0.21:0,0,1	0/0:10,0:7:5.81:0,6,35	./.	0/0:17,0:13:10.08:0,10,54	0/1:17,0:13:0.35:0,0,0	0/0:42,0:33:71.16:0,71,1139	0/1:17,0:16:1.34:107,0,1	0/0:8,0:4:8.70:0,9,190
chr10	78775013	.	GTATA	G	2924.74	PASS	AB=0.947;AC=34;AF=0.654;AN=52;BaseQRankSum=-0.221;DP=657;FS=1.163;HRun=0;HaplotypeScore=148.8534;InbreedingCoeff=0.1325;MQ=34.52;MQ0=82;MQRankSum=2.895;QD=6.69;ReadPosRankSum=-0.526;VQSLOD=2.8598;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:22:9.98:142,10,0	1/1:11,0:11:2.57:100,3,0	./.	./.	1/1:20,1:18:23.27:293,23,0	0/1:16,0:13:24.33:84,0,24	0/1:42,0:32:17.36:84,0,17	0/0:72,0:49:30.50:0,31,534	1/1:28,0:26:6.83:133,7,0	0/1:35,0:27:99:388,0,167	1/1:10,0:9:3.01:47,3,0	1/1:17,0:16:20.98:238,21,0	1/1:12,0:11:2.68:53,3,0	0/0:29,0:26:7.80:0,8,532	1/1:21,0:18:20.30:239,20,0	1/1:32,0:30:29.33:380,29,0	0/0:29,0:26:46.77:0,47,626	0/1:22,0:19:58.53:59,0,226	0/1:14,0:11:71.74:166,0,72	0/1:13,14:22:22.57:27,0,23	0/0:58,1:44:0.25:0,0,1	1/1:13,0:11:5.68:81,6,0	1/1:12,0:9:3.01:48,3,0	0/1:27,0:21:5.96:118,0,6	1/1:17,0:14:7.58:96,8,0	0/0:31,0:24:8.18:0,8,574	1/1:19,1:18:25.56:299,26,0	0/1:10,0:6:13.83:14,0,99
chr10	78775015	.	ATATG	A	1809.99	PASS	AB=1.000;AC=34;AF=0.654;AN=52;BaseQRankSum=0.798;DP=653;FS=0.576;HRun=0;HaplotypeScore=152.7075;InbreedingCoeff=0.0379;MQ=34.58;MQ0=84;MQRankSum=1.018;QD=3.43;ReadPosRankSum=1.000;VQSLOD=2.7297;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:22:9.77:144,10,0	0/1:11,0:11:0.76:34,0,1	./.	./.	1/1:22,0:18:19.57:118,20,0	0/1:16,0:12:12.34:22,0,12	0/1:40,0:30:8.83:35,0,9	0/1:74,0:49:99:123,0,344	0/1:28,0:26:49.04:49,0,62	0/1:35,0:27:99:156,0,173	1/1:10,0:9:2.99:23,3,0	1/1:14,3:16:20.79:295,21,0	1/1:2,10:11:2.68:53,3,0	0/1:28,0:25:7.94:8,0,393	1/1:20,0:17:14.78:108,15,0	1/1:32,0:30:23.38:162,23,0	0/0:28,0:25:43.46:0,43,509	0/1:21,0:18:45.04:45,0,70	0/1:15,0:12:28.43:74,0,28	0/1:28,0:22:7.08:10,0,7	0/0:58,0:43:0.36:0,0,1	1/1:2,11:11:5.68:119,6,0	1/1:10,2:9:2.99:24,3,0	1/1:11,15:21:9.03:178,9,0	1/1:17,0:14:5.48:52,5,0	0/0:30,0:24:6.25:0,6,433	1/1:21,0:18:16.53:136,17,0	0/0:9,0:6:11.97:0,12,111
chr10	78775907	.	C	CTTTAGACACACCATG	44169.87	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-11.978;DP=852;FS=2.118;HRun=0;HaplotypeScore=255.1884;InbreedingCoeff=0.9986;MQ=78.84;MQ0=5;MQRankSum=-18.942;QD=96.02;ReadPosRankSum=1.360;VQSLOD=4.7521;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,157,5867	1/1:0,8:20:23.61:1783,24,0	0/0:26,0:26:75.10:0,75,2051	0/0:28,0:28:78.25:0,78,2244	1/1:3,12:32:39.13:2655,39,0	1/1:1,7:30:21.07:1560,21,0	1/1:6,10:35:33.11:2393,33,0	1/1:44,0:41:99:5997,117,0	1/1:0,13:38:39.13:2890,39,0	1/1:0,15:26:69.13:4106,69,0	1/1:5,10:26:36.12:2544,36,0	0/0:32,0:32:93.28:0,93,3714	0/0:34,0:34:99:0,99,3477	0/0:21,0:21:60.21:0,60,2312	1/1:2,15:33:45.63:3344,46,0	1/1:2,21:37:63.69:4682,64,0	0/0:49,0:49:99:0,144,5612	0/0:33,0:32:99:0,99,4038	1/1:2,1:22:60.19:2542,60,0	1/1:0,10:26:30.10:2196,30,0	1/1:6,9:30:30.10:2094,30,0	0/0:18,0:18:42.14:0,42,1686	0/0:9,0:9:24.07:0,24,808	0/0:43,0:43:99:0,126,5278	1/1:1,10:29:33.11:2451,33,0	0/0:30,0:30:81.26:0,81,3151	1/1:2,11:26:42.14:2931,42,0	0/0:15,0:15:39.10:0,39,1520
chr10	78775910	.	T	TA	2016.88	PASS	AB=0.939;AC=21;AF=0.375;AN=56;BaseQRankSum=18.446;DP=725;FS=0.324;HRun=0;HaplotypeScore=199.4602;InbreedingCoeff=0.4959;MQ=83.77;MQ0=5;MQRankSum=-17.315;QD=6.30;ReadPosRankSum=5.500;VQSLOD=3.1391;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,160,2200	1/1:13,0:13:19.68:85,20,0	0/0:25,0:25:75.15:0,75,988	0/0:30,0:30:83.59:0,84,1096	0/1:25,0:25:33.49:163,0,33	1/1:19,0:19:19.21:82,19,0	0/1:20,0:20:4.20:78,0,4	0/1:23,22:42:99:625,0,755	1/1:24,0:24:35.68:152,36,0	0/1:22,0:22:9.89:133,0,10	0/1:15,1:16:16.07:117,0,16	0/0:33,0:33:99:0,99,1346	0/0:34,0:34:99:0,99,1379	0/0:20,0:20:60.20:0,60,835	1/1:23,0:23:41.22:177,41,0	1/1:32,0:32:34.78:221,35,0	0/0:50,0:50:99:0,147,2013	0/0:39,0:38:99:0,117,1524	0/0:10,0:10:18.15:0,18,365	0/1:16,0:16:31.02:75,0,31	0/1:21,1:21:52.51:53,0,81	0/0:15,0:15:45.13:0,45,611	0/0:9,0:9:24.08:0,24,334	0/0:43,0:43:99:0,129,1784	1/1:19,1:20:28.56:117,29,0	0/0:28,0:28:80.75:0,81,1084	1/1:20,0:19:19.02:141,19,0	0/0:13,0:13:39.11:0,39,527
chr10	78776167	.	T	TC	682.57	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.706;DP=682;FS=3.013;HRun=2;HaplotypeScore=102.1076;InbreedingCoeff=0.9957;MQ=94.13;MQ0=0;MQRankSum=-1.217;QD=32.50;ReadPosRankSum=1.958;VQSLOD=3.5315;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,1426	0/0:9,0:9:21.07:0,21,260	0/0:36,0:36:96.78:0,97,1164	0/0:28,0:28:72.22:0,72,883	0/0:20,0:20:45.14:0,45,553	0/0:20,0:20:54.17:0,54,669	0/0:32,0:32:84.26:0,84,1034	0/0:30,0:30:84.26:0,84,1030	1/1:2,19:21:54.18:777,54,0	0/0:22,0:22:60.16:0,60,727	0/0:20,0:19:39.12:0,39,483	0/0:22,0:22:66.21:0,66,818	0/0:20,0:20:54.17:0,54,667	0/0:19,0:19:57.17:0,57,694	0/0:34,0:34:99:0,99,1189	0/0:30,1:31:41.06:0,41,960	0/0:25,0:25:75.20:0,75,902	0/0:15,0:15:42.11:0,42,504	0/0:22,0:22:63.20:0,63,781	0/0:31,0:30:87.27:0,87,1071	0/0:25,0:25:72.23:0,72,892	0/0:22,0:22:54.17:0,54,669	0/0:15,0:14:36.11:0,36,446	0/0:25,0:25:75.24:0,75,929	0/0:23,0:22:66.19:0,66,800	0/0:28,0:28:81.25:0,81,994	0/0:25,0:24:69.17:0,69,838	0/0:21,0:21:63.20:0,63,781
chr10	78776481	.	A	ATCC	13333.59	PASS	AB=0.652;AC=38;AF=0.679;AN=56;BaseQRankSum=5.786;DP=610;FS=1.861;HRun=0;HaplotypeScore=144.1110;InbreedingCoeff=0.8417;MQ=53.59;MQ0=6;MQRankSum=-5.075;QD=28.99;ReadPosRankSum=-0.610;VQSLOD=4.8726;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,34:42:81.24:1617,81,0	1/1:8,1:9:18.06:344,18,0	0/0:14,0:6:10.57:0,11,115	0/0:11,0:6:9.03:0,9,126	1/1:12,3:15:24.55:413,25,0	1/1:16,0:16:15.45:273,15,0	1/1:33,0:33:36.85:398,37,0	1/1:23,16:36:39.09:607,39,0	0/0:28,0:28:66.43:0,66,855	1/1:16,5:22:35.76:823,36,0	1/1:9,1:11:12.91:381,13,0	1/1:12,12:22:54.13:1036,54,0	0/1:6,18:23:1.51:788,0,2	0/0:26,0:26:75.24:0,75,1062	1/1:24,9:33:82.66:1301,83,0	1/1:22,9:31:36.99:1186,37,0	0/0:24,0:24:54.12:0,54,734	0/0:15,0:14:23.78:0,24,326	1/1:15,2:17:31.36:423,31,0	1/1:13,3:15:37.29:515,37,0	1/1:29,4:30:42.12:748,42,0	1/1:7,9:15:20.49:590,20,0	1/1:13,4:14:17.83:240,18,0	0/1:14,8:22:16.38:418,0,16	1/1:20,5:24:57.76:916,58,0	0/0:22,0:22:54.18:0,54,780	1/1:12,1:13:21.92:317,22,0	0/0:10,0:10:18.06:0,18,247
chr10	78776496	.	CTCT	C	2602.82	PASS	AB=0.940;AC=25;AF=0.446;AN=56;BaseQRankSum=6.442;DP=606;FS=9.170;HRun=0;HaplotypeScore=181.4823;InbreedingCoeff=0.3916;MQ=47.23;MQ0=20;MQRankSum=-4.919;QD=7.54;ReadPosRankSum=-4.889;VQSLOD=1.0917;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:95.68:0,96,1259	0/1:9,2:11:23.88:71,0,24	0/0:13,0:5:12.03:0,12,231	0/0:8,0:3:9.03:0,9,181	1/1:11,1:12:8.14:100,8,0	1/1:15,2:17:32.10:251,32,0	1/1:21,7:27:36.07:330,36,0	1/1:31,0:27:32:282,32,0	0/0:27,0:26:78.23:0,78,1492	0/1:26,0:26:99:149,0,205	1/1:10,2:12:18.90:137,19,0	0/1:25,1:23:19.02:19,0,425	0/0:26,0:23:44.15:0,44,484	0/0:29,0:29:87.20:0,87,1766	1/1:30,3:33:7.75:293,8,0	0/1:34,1:34:94.12:292,0,94	0/0:21,0:21:40.44:0,40,1174	0/0:17,0:15:8.74:0,9,608	0/1:17,0:15:75.15:123,0,75	0/1:15,3:15:4.39:163,0,4	1/1:24,5:24:33.73:211,34,0	0/0:17,0:15:7.18:0,7,252	0/1:16,1:14:22.91:23,0,139	0/0:23,0:22:1.96:0,2,196	1/1:22,1:22:2.48:228,2,0	0/0:30,0:28:83.79:0,84,1481	1/1:8,2:8:5.58:126,6,0	0/0:7,0:7:18.06:0,18,374
chr10	78776505	.	C	CTCT	5283.50	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=12.608;DP=584;FS=26.579;HRun=0;HaplotypeScore=178.0124;InbreedingCoeff=0.6823;MQ=44.04;MQ0=23;MQRankSum=-11.265;QD=18.87;ReadPosRankSum=1.215;VQSLOD=3.1761;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:75.88:0,76,677	1/1:8,3:12:20.75:294,21,0	0/0:12,0:3:9.03:0,9,135	0/0:11,0:4:11.74:0,12,85	1/1:13,2:13:22.79:206,23,0	0/1:14,0:16:28.19:81,0,28	0/1:17,0:22:34.06:154,0,34	1/1:18,0:14:8.07:75,8,0	0/0:28,0:27:63.21:0,63,1000	1/1:11,12:26:42.07:886,42,0	1/1:8,1:12:24.13:193,24,0	0/0:26,0:23:16.50:0,16,281	0/0:26,0:23:0.89:0,1,184	0/0:31,0:31:81.23:0,81,1225	1/1:15,13:29:69.53:899,70,0	1/1:15,13:30:18.62:864,19,0	0/0:25,0:25:49.79:0,50,882	0/0:19,0:16:21.97:0,22,527	1/1:13,3:14:2.35:289,2,0	1/1:14,5:16:26.38:319,26,0	1/1:24,1:19:24.46:194,24,0	0/0:18,0:15:12.19:0,12,164	0/0:16,0:13:17.26:0,17,190	0/0:23,0:22:8.47:0,8,110	1/1:11,8:19:50.89:635,51,0	0/0:30,0:28:75.24:0,75,1144	1/1:4,4:5:11.95:169,12,0	0/1:8,0:8:23.76:24,0,170
chr10	78776508	.	TTCC	T	2118.61	PASS	AB=0.975;AC=21;AF=0.375;AN=56;BaseQRankSum=8.976;DP=586;FS=22.902;HRun=0;HaplotypeScore=180.7030;InbreedingCoeff=0.4645;MQ=43.56;MQ0=25;MQRankSum=-6.662;QD=7.79;ReadPosRankSum=-2.574;VQSLOD=1.1830;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:99:0,111,2227	0/1:9,1:10:10.16:121,0,10	0/0:11,0:4:8.99:0,9,134	0/0:10,0:4:11.85:0,12,110	1/1:14,0:12:6.74:140,7,0	0/1:17,0:17:0.47:0,0,222	0/1:22,0:21:23.28:23,0,135	0/1:19,0:14:2.01:79,0,2	0/0:27,0:26:66.23:0,66,1410	0/1:24,1:25:1.90:263,0,2	1/1:13,1:14:22.92:172,23,0	0/0:27,0:24:53.05:0,53,542	0/0:24,0:21:43.93:0,44,564	0/0:29,0:29:84.29:0,84,1771	1/1:30,0:30:36.60:320,37,0	0/1:32,0:30:25.35:276,0,25	0/0:28,0:28:74.58:0,75,1462	0/0:18,0:15:29.40:0,29,828	0/1:19,1:15:27.60:100,0,28	1/1:17,0:14:23.76:229,24,0	1/1:24,0:18:7.93:200,8,0	0/0:20,0:17:38.90:0,39,424	0/0:16,0:13:17.98:0,18,192	0/0:24,0:22:0.69:0,1,261	1/1:20,0:19:30.53:305,31,0	0/0:28,0:26:75.25:0,75,1631	1/1:8,0:5:1.47:75,1,0	0/0:7,0:8:15.02:0,15,297
chr10	78776523	.	C	CTCT	3653.49	PASS	AB=0.941;AC=22;AF=0.393;AN=56;BaseQRankSum=5.653;DP=611;FS=10.286;HRun=0;HaplotypeScore=175.5535;InbreedingCoeff=0.5798;MQ=40.67;MQ0=45;MQRankSum=-9.602;QD=13.00;ReadPosRankSum=-0.354;VQSLOD=2.8183;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:44:98.23:0,98,1342	1/1:7,4:10:14.98:246,15,0	0/0:15,0:2:2.98:0,3,22	0/1:14,0:1:0:0,0,0	1/1:16,1:14:6.02:78,6,0	0/0:14,0:14:18.98:0,19,161	0/1:20,0:18:0.89:1,0,117	0/1:18,0:12:23.25:146,0,23	0/0:26,0:25:54.12:0,54,736	1/1:20,8:28:36.40:732,36,0	1/1:15,1:15:10.77:158,11,0	0/0:28,0:24:44.96:0,45,388	0/0:20,0:17:29.12:0,29,238	0/0:28,0:28:81.15:0,81,1132	1/1:23,8:30:18.97:460,19,0	0/1:21,10:29:24.19:634,0,24	0/0:26,0:25:67.28:0,67,830	0/0:20,0:17:42.07:0,42,649	0/1:21,3:17:1.98:368,0,2	1/1:12,5:14:24.14:341,24,0	0/1:19,0:13:14.36:44,0,14	0/0:26,0:23:31.56:0,32,243	0/0:18,0:15:20.75:0,21,167	0/0:23,0:21:19.29:0,19,133	1/1:22,5:25:3.57:329,4,0	0/0:29,0:26:69.21:0,69,1038	1/1:3,4:4:8.98:117,9,0	0/0:9,0:9:20.90:0,21,230
chr10	78776526	.	TTCC	T	1402.96	PASS	AB=0.808;AC=10;AF=0.179;AN=56;BaseQRankSum=2.307;DP=612;FS=5.830;HRun=0;HaplotypeScore=172.8181;InbreedingCoeff=0.7585;MQ=40.03;MQ0=43;MQRankSum=-3.805;QD=10.88;ReadPosRankSum=0.350;VQSLOD=2.9518;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:42:81.22:0,81,1605	0/0:12,0:10:17.42:0,17,171	0/0:15,0:2:3.01:0,3,56	0/1:16,0:1:0:0,0,0	0/0:16,0:12:14.19:0,14,132	0/0:15,0:15:15.89:0,16,237	0/0:24,0:22:5.32:0,5,172	0/0:17,0:12:27.02:0,27,384	0/0:26,0:25:42.14:0,42,842	0/0:28,0:28:54.69:0,55,771	0/0:16,0:15:22.15:0,22,254	1/1:6,21:23:39.13:560,39,0	1/1:12,7:16:23.97:321,24,0	0/0:30,0:30:84.27:0,84,1603	0/0:30,0:29:15.99:0,16,242	0/0:31,0:29:44.56:0,45,428	0/0:26,0:25:51.31:0,51,973	0/0:20,0:17:42.14:0,42,864	0/0:25,0:18:38.50:0,38,433	0/0:14,0:11:20.59:0,21,277	0/0:22,0:16:11.06:0,11,130	1/1:10,15:22:27.02:319,27,0	1/1:3,15:15:17.76:253,18,0	0/1:9,15:21:8.16:110,0,8	0/0:27,0:25:26.19:0,26,348	0/0:28,1:26:27.82:0,28,1353	0/0:6,0:3:8.70:0,9,86	0/0:8,0:8:15.05:0,15,298
chr10	78776571	.	CTCT	C	2444.65	PASS	AB=1.000;AC=19;AF=0.352;AN=54;BaseQRankSum=1.037;DP=619;FS=6.285;HRun=0;HaplotypeScore=135.5175;InbreedingCoeff=-0.2720;MQ=45.18;MQ0=38;MQRankSum=-1.066;QD=6.27;ReadPosRankSum=-6.629;VQSLOD=-0.1764;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:28,14:41:99:1707,114,0	0/1:14,0:12:13.48:13,0,51	./.	0/0:7,1:1:3.01:0,3,54	0/1:18,0:13:38.25:38,0,75	0/1:20,0:20:59.40:59,0,72	0/1:25,0:22:87.05:87,0,127	0/1:25,0:20:14.88:71,0,15	0/0:21,0:20:20.81:0,21,198	0/1:31,0:26:68.82:69,0,175	0/0:16,0:13:9.62:0,10,121	0/0:23,0:22:0.17:0,0,261	0/1:26,0:23:78.69:79,0,256	0/0:32,0:30:87.17:0,87,1757	0/1:22,0:20:33.21:127,0,33	0/1:19,0:19:16.05:16,0,64	0/0:32,0:29:81.03:0,81,1318	0/0:35,0:33:93.70:0,94,1786	1/1:17,0:14:8:116,8,0	0/1:26,0:23:67.47:67,0,123	0/1:20,0:16:80.28:80,0,97	0/1:24,0:22:18.34:18,0,167	0/0:17,0:14:8.10:0,8,116	0/1:25,0:24:19.34:19,0,230	0/1:20,0:17:6.44:6,0,97	0/0:27,0:23:57.15:0,57,1175	0/1:16,0:12:31.31:31,0,53	0/0:5,0:5:15.05:0,15,325
chr10	78776574	.	TTCC	T	747.95	PASS	AB=0.952;AC=5;AF=0.093;AN=54;BaseQRankSum=1.126;DP=613;FS=0.630;HRun=0;HaplotypeScore=137.6063;InbreedingCoeff=0.3217;MQ=46.10;MQ0=38;MQRankSum=0.327;QD=7.26;ReadPosRankSum=-0.736;VQSLOD=3.0935;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:43,0:42:68.87:776,69,0	0/0:13,0:11:19.57:0,20,176	./.	0/0:7,0:1:3.01:0,3,36	0/0:18,0:13:23.76:0,24,225	0/0:20,0:20:20.37:0,20,245	0/0:24,0:22:18.88:0,19,292	0/0:21,1:17:15.38:0,15,157	0/0:22,0:21:23.85:0,24,339	0/0:30,0:25:42.38:0,42,540	0/0:15,0:13:26.24:0,26,285	0/0:24,0:23:42.20:0,42,572	0/0:25,0:22:38.87:0,39,600	0/0:33,0:31:93.29:0,93,1847	0/1:21,0:19:10.08:10,0,84	0/0:21,0:20:25.28:0,25,249	0/0:31,0:28:80.77:0,81,1516	0/0:34,0:32:87.30:0,87,1817	0/1:16,2:13:72.53:73,0,96	0/0:23,1:22:39.28:0,39,427	0/1:20,1:17:4.43:4,0,162	0/0:22,0:20:38.81:0,39,463	0/0:16,0:13:20.11:0,20,277	0/0:26,0:25:11.12:0,11,456	0/0:22,0:20:27.26:0,27,313	0/0:25,0:21:63.21:0,63,1267	0/0:17,0:14:22.72:0,23,230	0/0:6,0:5:15.05:0,15,327
chr10	78776595	.	CTCT	C	4091.68	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=7.919;DP=636;FS=17.599;HRun=0;HaplotypeScore=117.8905;InbreedingCoeff=0.8744;MQ=51.57;MQ0=34;MQRankSum=2.113;QD=12.95;ReadPosRankSum=0.783;VQSLOD=2.1934;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:40:93.17:0,93,1466	1/1:4,10:14:6.74:157,7,0	0/0:18,0:6:18.02:0,18,264	0/0:10,0:6:6.99:0,7,141	1/1:7,15:17:38.81:396,39,0	1/1:5,13:18:21.07:301,21,0	1/1:10,13:22:9.34:238,9,0	1/1:23,2:20:11.95:126,12,0	0/0:4,0:22:17.94:0,18,209	1/1:13,16:25:44.91:507,45,0	1/1:7,10:16:23.94:259,24,0	0/0:20,0:20:30.05:0,30,504	0/0:26,0:24:63.06:0,63,964	0/0:33,0:32:80.98:0,81,1442	1/1:4,18:22:11.93:172,12,0	1/1:3,18:20:20.40:299,20,0	0/0:35,0:32:72.16:0,72,1243	0/0:34,0:35:89.67:0,90,1562	1/1:16,7:15:20.80:206,21,0	1/1:6,18:22:53.91:641,54,0	1/1:10,13:19:12.04:159,12,0	0/0:19,0:18:33.55:0,34,504	0/1:10,0:10:30.88:31,0,136	0/0:26,0:26:60.09:0,60,1009	1/1:5,20:24:24.08:329,24,0	0/0:25,0:22:39.10:0,39,626	1/1:7,13:18:21.03:272,21,0	0/0:7,0:7:11.99:0,12,202
chr10	78779036	.	T	TGA	436.14	PASS	AB=0.946;AC=22;AF=0.407;AN=54;BaseQRankSum=0.559;DP=405;FS=4.759;HRun=0;HaplotypeScore=120.9960;InbreedingCoeff=0.4216;MQ=42.55;MQ0=16;MQRankSum=-1.228;QD=2.55;ReadPosRankSum=-0.205;VQSLOD=1.6074;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:18:8.66:41,9,0	1/1:5,0:5:0.31:0,0,0	1/1:17,0:4:0.45:1,0,0	0/1:14,0:3:8.03:8,0,33	0/0:13,0:11:2.77:0,3,15	0/0:13,0:13:11.36:0,11,56	0/0:16,0:16:6.66:0,7,33	0/0:22,0:18:8.91:0,9,43	0/0:17,0:17:17.89:0,18,139	0/0:9,0:9:11.67:0,12,69	./.	1/1:14,0:13:14.19:105,14,0	1/1:13,0:14:17.17:119,17,0	0/0:17,0:16:17.94:0,18,156	0/0:12,0:12:8.53:0,9,45	1/1:11,0:11:2.37:8,2,0	0/0:29,0:29:44.04:0,44,384	0/0:14,0:14:29.90:0,30,244	0/0:17,0:14:11.40:0,11,61	0/0:17,0:17:2.84:0,3,14	0/0:14,0:14:2.92:0,3,17	1/1:8,0:8:5.75:32,6,0	1/1:15,0:14:3:25,3,0	1/1:10,0:10:3:25,3,0	0/1:13,0:9:2.93:3,0,9	0/1:13,5:17:37.07:133,0,37	0/0:12,0:11:8.61:0,9,45	0/1:13,0:12:24.78:94,0,25
chr10	78779058	.	AGAGAGAGC	A	2484.86	PASS	AB=0.885;AC=26;AF=0.464;AN=56;BaseQRankSum=0.719;DP=355;FS=12.905;HRun=0;HaplotypeScore=115.0414;InbreedingCoeff=0.6060;MQ=56.24;MQ0=10;MQRankSum=0.569;QD=14.79;ReadPosRankSum=-0.419;VQSLOD=1.9681;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:20.83:21,0,195	1/1:3,5:8:4.53:87,5,0	0/0:22,0:13:24.37:0,24,263	0/0:16,0:9:27.08:0,27,552	1/1:12,1:13:5.47:121,5,0	1/1:13,0:12:20.99:261,21,0	0/1:2,11:13:8.61:45,0,9	1/1:5,14:16:38.04:621,38,0	0/0:13,0:13:23.74:0,24,766	1/1:8,0:8:15.79:223,16,0	1/1:8,0:7:2.98:22,3,0	0/0:12,0:11:18.06:0,18,608	0/0:15,0:15:28.58:0,29,784	0/0:11,0:10:23.91:0,24,769	1/1:12,1:13:14.91:252,15,0	1/1:9,0:9:0.80:130,1,0	0/0:27,0:26:60.20:0,60,2053	0/0:15,0:15:41.97:0,42,1232	1/1:11,1:9:26.63:355,27,0	1/1:7,2:9:11.92:150,12,0	1/1:12,0:12:5.98:48,6,0	0/0:7,0:7:9.01:0,9,241	0/0:8,0:8:12.02:0,12,304	0/0:12,0:12:4.54:0,5,160	0/1:5,0:4:6.51:148,0,7	0/0:16,0:15:41.54:0,42,1079	0/1:8,0:8:4.13:198,0,4	0/0:13,0:13:30.49:0,30,1003
chr10	78779337	.	C	CTT	1999.13	PASS	AB=0.881;AC=32;AF=0.593;AN=54;BaseQRankSum=1.901;DP=332;FS=2.830;HRun=12;HaplotypeScore=66.5081;InbreedingCoeff=0.6184;MQ=27.06;MQ0=46;MQRankSum=-3.113;QD=11.17;ReadPosRankSum=-3.317;VQSLOD=1.4486;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:2,3:4:5.05:48,5,0	1/1:6,1:7:7.74:87,8,0	0/0:21,0:2:4.25:0,4,31	./.	1/1:7,7:15:19.25:215,19,0	1/1:8,0:7:6:75,6,0	1/1:9,0:6:6.47:55,6,0	1/1:5,5:8:15.05:209,15,0	1/1:5,0:6:1.38:30,1,0	0/1:11,5:15:0.76:238,0,1	1/1:10,5:15:16.95:166,17,0	1/1:4,0:2:1.55:4,2,0	0/0:7,0:6:9.92:0,10,41	0/0:13,0:7:3.30:0,3,56	1/1:4,1:6:10.21:96,10,0	1/1:8,3:10:22.04:210,22,0	0/0:18,0:8:4.71:0,5,98	0/0:15,0:7:14.68:0,15,120	1/1:7,2:10:14.86:150,15,0	1/1:15,2:18:31.30:279,31,0	1/1:1,1:1:3:28,3,0	0/0:9,0:6:5.93:0,6,45	0/0:10,0:8:11.87:0,12,110	0/0:13,0:8:11.90:0,12,101	1/1:12,9:22:2.16:221,2,0	0/0:16,0:14:14.93:0,15,202	0/1:11,0:10:3.02:66,0,3	0/0:5,0:5:12.01:0,12,111
chr10	78779439	.	C	CTCTT	1245.44	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.074;DP=466;FS=3.494;HRun=0;HaplotypeScore=69.7675;InbreedingCoeff=0.8509;MQ=61.93;MQ0=23;MQRankSum=0.545;QD=47.90;ReadPosRankSum=1.506;VQSLOD=4.2936;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,19:25:54.19:1340,54,0	0/0:5,0:4:12.04:0,12,203	0/0:12,0:7:18.48:0,18,253	0/0:19,0:17:45.12:0,45,717	0/0:21,0:20:51.17:0,51,861	0/0:18,0:16:42.10:0,42,678	0/0:22,0:19:42.13:0,42,681	0/0:24,0:21:36.07:0,36,541	0/0:14,0:13:30.10:0,30,494	0/0:11,0:11:24.08:0,24,405	0/0:10,0:8:15.05:0,15,253	0/0:12,0:10:30.10:0,30,506	0/0:16,0:16:45.12:0,45,730	0/0:13,0:13:33.07:0,33,526	0/0:19,0:17:45.15:0,45,759	0/0:22,0:20:51.14:0,51,829	0/0:18,0:16:33.09:0,33,528	0/0:19,0:17:48.12:0,48,779	0/0:13,0:13:30.07:0,30,454	0/0:15,0:14:24.06:0,24,379	0/0:24,0:23:60.19:0,60,967	0/0:12,0:10:17.93:0,18,304	0/0:12,0:11:27.09:0,27,455	0/0:23,0:22:54.18:0,54,907	0/0:25,0:25:60.13:0,60,948	0/0:17,0:17:45.15:0,45,758	0/0:17,0:16:39.08:0,39,602	0/0:6,0:6:6.02:0,6,101
chr10	78781511	.	CG	C	9981.72	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=11.891;DP=620;FS=2.303;HRun=4;HaplotypeScore=63.5583;InbreedingCoeff=0.9997;MQ=81.22;MQ0=1;MQRankSum=-1.079;QD=29.36;ReadPosRankSum=0.681;VQSLOD=4.6525;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,42:43:99:1323,111,0	1/1:0,8:8:24.07:288,24,0	0/0:23,0:22:54.12:0,54,653	0/0:18,0:18:40.35:0,40,497	1/1:0,21:21:51.09:580,51,0	1/1:2,14:16:33.10:396,33,0	1/1:1,28:29:69.21:828,69,0	1/1:3,21:24:54.15:637,54,0	0/0:19,0:19:54.18:0,54,755	1/1:0,19:19:54.14:625,54,0	1/1:0,15:15:45.14:538,45,0	0/0:19,0:19:51.16:0,51,695	0/0:15,0:15:45.13:0,45,611	0/0:20,0:20:57.19:0,57,792	1/1:2,23:25:57.17:684,57,0	1/1:2,27:29:63.19:756,63,0	0/0:32,0:32:90.26:0,90,1221	0/0:23,0:23:66.17:0,66,871	1/1:1,18:19:54.15:632,54,0	1/1:2,23:25:60.18:718,60,0	1/1:1,24:25:63.19:756,63,0	0/0:17,0:17:48.12:0,48,621	0/0:19,0:19:54.17:0,54,739	0/0:32,0:32:93.23:0,93,1255	1/1:2,17:19:45.14:540,45,0	0/0:23,0:23:66.20:0,66,890	1/1:2,21:23:57.17:683,57,0	0/0:20,0:20:60.15:0,60,785
chr10	78785692	.	TGTAAACTAGTCGCACCA	T	1160.92	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.673;DP=727;FS=11.130;HRun=0;HaplotypeScore=318.2626;InbreedingCoeff=0.9988;MQ=89.40;MQ0=0;MQRankSum=-4.944;QD=52.77;ReadPosRankSum=-0.118;VQSLOD=1.6458;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:33.07:1256,33,0	0/0:16,0:16:48.16:0,48,3261	0/0:29,0:29:75.30:0,75,5208	0/0:25,0:25:72.25:0,72,4514	0/0:14,0:14:36.12:0,36,2738	0/0:17,0:17:48.16:0,48,3817	0/0:44,0:44:99:0,129,9718	0/0:39,0:39:99:0,114,7678	0/0:34,0:34:99:0,102,6864	0/0:33,0:33:84.29:0,84,6024	0/0:14,0:14:36.12:0,36,2476	0/0:30,0:30:90.31:0,90,6456	0/0:34,0:34:99:0,102,7498	0/0:37,0:37:99:0,111,7970	0/0:39,0:39:99:0,114,7949	0/0:41,0:41:99:0,120,8477	0/0:18,0:18:54.19:0,54,3718	0/0:19,0:19:54.18:0,54,3603	0/0:14,0:14:42.14:0,42,3079	0/0:15,0:15:42.13:0,42,3277	0/0:40,0:40:99:0,117,9181	0/0:16,0:16:45.15:0,45,3293	0/0:13,0:13:36.12:0,36,2556	0/0:39,0:39:99:0,117,8596	0/0:20,0:20:57.20:0,57,4287	0/0:22,0:22:66.23:0,66,4918	0/0:33,0:33:99:0,99,6988	0/0:10,0:10:30.10:0,30,2272
chr10	78786381	.	G	GAC	4787.76	PASS	AB=0.747;AC=36;AF=0.643;AN=56;BaseQRankSum=-0.055;DP=650;FS=0.560;HRun=0;HaplotypeScore=115.8046;InbreedingCoeff=0.2173;MQ=65.89;MQ0=13;MQRankSum=-1.652;QD=8.69;ReadPosRankSum=-2.667;VQSLOD=4.2682;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:41,2:49:16.98:129,17,0	0/1:2,4:8:32.62:122,0,33	0/1:46,0:26:1.83:2,0,36	0/0:51,0:22:5.95:0,6,52	0/1:6,4:10:55.08:79,0,55	1/1:20,1:27:6:52,6,0	1/1:20,0:26:21.48:193,21,0	0/1:21,7:29:0.47:339,0,0	1/1:11,1:26:29.99:262,30,0	1/1:7,7:16:21.02:254,21,0	1/1:6,8:15:12.04:182,12,0	1/1:12,4:33:14.49:404,14,0	1/1:12,0:24:25.25:231,25,0	0/0:18,0:18:33.09:0,33,369	0/1:9,19:29:52.41:521,0,52	0/1:14,14:29:64.43:374,0,64	0/0:18,0:20:41.78:0,42,430	0/0:1,0:4:5.68:0,6,28	0/1:13,6:20:12.46:227,0,12	0/1:8,6:15:24.57:82,0,25	0/1:25,8:36:48.92:164,0,49	1/1:7,1:16:15:131,15,0	1/1:3,2:12:12.01:124,12,0	1/1:11,3:26:24.02:248,24,0	1/1:3,8:13:9.93:305,10,0	0/1:20,1:22:21.47:21,0,211	1/1:9,8:18:12.94:341,13,0	0/0:6,0:6:18.05:0,18,201
chr10	78787438	.	TAC	T	1088.53	PASS	AB=1.000;AC=22;AF=0.458;AN=48;BaseQRankSum=-0.768;DP=508;FS=1.479;HRun=0;HaplotypeScore=153.2832;InbreedingCoeff=0.5822;MQ=51.16;MQ0=9;MQRankSum=1.548;QD=4.57;ReadPosRankSum=3.564;VQSLOD=3.0760;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:5.98:0,6,48	1/1:14,0:14:6.83:32,7,0	0/0:19,0:8:3:0,3,29	0/0:25,0:12:8.90:0,9,67	0/0:16,0:16:11.95:0,12,100	0/0:15,0:14:1.55:0,2,4	0/0:18,0:18:5.87:0,6,35	1/1:21,0:21:23.88:188,24,0	./.	0/0:22,0:22:3.24:0,3,290	0/0:5,0:4:3:0,3,25	1/1:20,1:21:11.99:98,12,0	1/1:14,0:14:3.01:33,3,0	0/0:34,0:33:11.80:0,12,95	0/1:33,0:33:4.34:4,0,125	0/1:34,0:34:20.20:20,0,140	0/0:18,0:18:9.46:0,9,89	0/0:7,0:8:11.90:0,12,103	1/1:16,0:15:0.81:102,1,0	./.	1/1:18,0:17:11.98:97,12,0	1/1:14,0:14:17.90:136,18,0	1/1:12,1:12:14.98:123,15,0	1/1:28,2:30:38.74:312,39,0	./.	0/0:18,0:15:22.06:0,22,165	1/1:10,0:10:16.15:114,16,0	./.
chr10	78787460	.	CACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	C	6009.14	PASS	AB=0.970;AC=22;AF=0.458;AN=48;BaseQRankSum=1.037;DP=427;FS=3.277;HRun=0;HaplotypeScore=243.1546;InbreedingCoeff=0.1684;MQ=44.92;MQ0=22;MQRankSum=-2.756;QD=23.02;ReadPosRankSum=1.637;VQSLOD=3.1146;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:4.92:0,5,46	1/1:2,12:14:9.39:644,9,0	0/0:8,0:1:3:0,3,29	0/0:13,0:3:8.91:0,9,111	0/0:12,0:12:10.86:0,11,97	1/1:9,0:7:5.71:260,6,0	0/0:15,0:12:2.04:0,2,29	1/1:6,11:15:42.05:672,42,0	0/0:7,0:6:6.02:0,6,381	0/1:18,0:18:45.15:651,0,45	./.	0/1:18,0:17:10.36:62,0,10	1/1:1,0:13:4.56:45,5,0	0/0:26,0:24:15.52:0,16,549	0/1:29,0:29:17.89:1246,0,18	0/1:29,0:29:81.81:863,0,82	0/0:24,0:24:36.17:0,36,2058	0/0:10,0:9:18.03:0,18,665	1/1:3,9:10:7.02:732,7,0	./.	1/1:18,0:14:12.01:147,12,0	0/1:14,0:14:12.90:56,0,13	0/1:13,0:13:9.39:40,0,9	0/1:26,0:31:66.49:141,0,66	./.	0/1:14,0:9:52.78:53,0,611	1/1:9,0:9:18.03:398,18,0	./.
chr10	78787462	.	CAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	C	5534.60	PASS	AB=0.967;AC=30;AF=0.625;AN=48;BaseQRankSum=0.413;DP=430;FS=3.988;HRun=0;HaplotypeScore=236.8659;InbreedingCoeff=0.5368;MQ=44.97;MQ0=24;MQRankSum=-2.860;QD=21.04;ReadPosRankSum=0.648;VQSLOD=3.7526;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:0.59:2,1,0	1/1:13,0:13:9.39:591,9,0	./.	0/0:13,0:3:3.01:0,3,44	1/1:5,7:11:1.36:3,1,0	1/1:6,0:7:5.71:224,6,0	1/1:14,0:11:1.95:6,2,0	1/1:16,0:14:26.93:358,27,0	0/0:6,0:5:6.02:0,6,429	1/1:18,0:18:42.03:977,42,0	1/1:5,0:4:3:25,3,0	0/0:17,0:16:3.01:0,3,47	1/1:13,0:13:4.54:27,5,0	0/0:22,0:23:15.45:0,15,481	1/1:3,27:30:18.06:1355,18,0	1/1:6,21:27:12.04:916,12,0	0/0:22,0:24:30.99:0,31,2070	0/0:9,0:9:15.05:0,15,609	1/1:12,0:10:17.85:585,18,0	./.	1/1:19,0:14:5.58:49,6,0	0/0:19,0:19:9.39:0,9,94	0/0:20,0:19:9:0,9,86	0/1:33,0:31:66.14:66,0,283	./.	0/1:13,0:9:81.65:82,0,505	1/1:9,0:9:11.19:270,11,0	./.
chr10	78787478	.	GAGAGAGAGAGAGAGAGAGAGAGAGAC	G	3491.23	PASS	AB=0.862;AC=31;AF=0.705;AN=44;BaseQRankSum=2.184;DP=355;FS=0.000;HRun=0;HaplotypeScore=178.3423;InbreedingCoeff=0.5829;MQ=41.25;MQ0=26;MQRankSum=-1.940;QD=14.73;ReadPosRankSum=1.475;VQSLOD=2.4095;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:8:0.48:2,0,0	1/1:13,0:13:9.30:371,9,0	./.	./.	1/1:8,0:7:0.47:1,0,0	1/1:6,0:5:5.81:183,6,0	1/1:5,0:2:2.04:6,2,0	1/1:14,0:11:2.41:46,2,0	0/0:8,0:6:9.03:0,9,409	1/1:11,0:10:24.01:297,24,0	./.	0/1:5,12:16:0:0,0,0	1/1:10,0:10:4.26:77,4,0	0/0:24,0:22:14.92:0,15,463	1/1:27,0:27:18.06:860,18,0	1/1:21,0:21:12.04:587,12,0	0/0:24,0:24:47.53:0,48,2113	0/0:9,0:8:18.06:0,18,588	0/1:11,0:9:15.96:238,0,16	./.	./.	1/1:19,0:19:6.73:63,7,0	1/1:20,0:20:11.58:113,12,0	1/1:29,0:27:24.50:569,25,0	0/1:12,0:11:0:0,0,0	0/0:17,0:11:9.42:0,9,1015	1/1:5,0:5:8.95:77,9,0	./.
chr10	78787480	.	GAGAGAGAGAGAGAGAGAGAGAGAC	G	2750.35	PASS	AB=0.978;AC=27;AF=0.643;AN=42;BaseQRankSum=3.172;DP=354;FS=0.859;HRun=0;HaplotypeScore=173.3222;InbreedingCoeff=0.4970;MQ=41.40;MQ0=26;MQRankSum=-1.640;QD=12.28;ReadPosRankSum=1.397;VQSLOD=2.7745;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:8:0.48:2,0,0	1/1:13,0:13:9.41:329,9,0	./.	./.	0/1:8,0:7:0:0,0,0	1/1:6,0:5:5.81:148,6,0	1/1:5,0:2:1.82:5,2,0	0/1:14,0:11:23.10:55,0,23	0/0:8,0:6:9.03:0,9,332	0/1:11,0:10:2.34:110,0,2	./.	0/1:14,2:15:0:0,0,0	1/1:11,0:11:6.91:146,7,0	0/0:24,0:22:14.90:0,15,405	1/1:27,0:27:18.06:775,18,0	1/1:21,0:21:12.04:531,12,0	0/0:23,0:23:47.53:0,48,1778	0/0:9,0:8:18.05:0,18,492	0/1:11,0:9:6.64:173,0,7	./.	./.	1/1:7,12:19:4.75:37,5,0	1/1:5,15:20:8.43:69,8,0	1/1:26,2:26:24.24:483,24,0	./.	0/0:18,0:12:26.31:0,26,898	1/1:5,0:5:6.82:31,7,0	./.
chr10	78787598	.	AGAG	A	69.08	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=2.222;DP=386;FS=4.317;HRun=0;HaplotypeScore=60.1563;InbreedingCoeff=0.5135;MQ=42.70;MQ0=51;MQRankSum=-1.458;QD=4.06;ReadPosRankSum=0.920;VQSLOD=1.3244;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,10:14:8.67:151,9,0	0/0:5,0:5:6.02:0,6,124	./.	0/0:26,0:1:3:0,3,26	0/0:8,0:6:15.05:0,15,304	0/0:14,0:14:30.09:0,30,577	0/0:17,0:17:36.12:0,36,677	0/0:13,0:9:14.96:0,15,207	0/0:11,0:10:9.03:0,9,189	0/0:12,0:8:24.08:0,24,494	0/0:13,0:13:30.09:0,30,545	0/0:17,0:13:27.09:0,27,563	0/0:3,0:3:2.99:0,3,24	0/0:16,0:15:33.58:0,34,641	0/0:16,0:14:36.12:0,36,720	0/0:20,0:18:44.72:0,45,812	0/0:16,0:14:30.08:0,30,579	0/0:12,0:11:24.06:0,24,465	0/0:14,0:9:24.08:0,24,506	0/0:7,0:7:12.04:0,12,250	0/0:32,0:27:50.14:0,50,1028	0/0:11,0:11:27.01:0,27,454	0/0:12,0:10:27.09:0,27,530	0/0:24,0:22:53.77:0,54,934	0/0:10,0:9:20.95:0,21,297	0/0:12,0:10:21.07:0,21,443	0/0:8,0:6:15.05:0,15,317	0/0:2,0:2:5.89:0,6,71
chr10	78787687	.	AG	A	2438.04	PASS	AB=0.800;AC=30;AF=0.536;AN=56;BaseQRankSum=5.257;DP=346;FS=8.950;HRun=7;HaplotypeScore=44.3756;InbreedingCoeff=0.7417;MQ=61.61;MQ0=13;MQRankSum=-1.392;QD=11.67;ReadPosRankSum=1.937;VQSLOD=1.1291;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,17:22:36.08:367,36,0	1/1:0,2:2:3.01:31,3,0	0/0:30,0:9:10.04:0,10,155	0/1:43,0:11:6.39:6,0,42	1/1:3,8:11:15.01:146,15,0	1/1:1,6:6:14.49:152,14,0	1/1:7,6:10:21.05:213,21,0	0/1:3,6:6:10.56:80,0,11	0/0:10,0:10:24.05:0,24,302	1/1:6,6:10:6.01:62,6,0	1/1:1,3:4:6.01:61,6,0	0/0:9,0:8:21.04:0,21,227	0/0:12,0:12:20.98:0,21,224	0/0:9,0:9:12.04:0,12,144	1/1:3,12:13:9.89:227,10,0	1/1:3,12:12:24.05:244,24,0	0/0:10,0:10:27.04:0,27,320	0/0:11,0:11:27.06:0,27,314	1/1:5,5:6:12.03:122,12,0	1/1:0,4:4:9.02:92,9,0	1/1:8,14:19:33.76:417,34,0	0/0:13,0:13:30.09:0,30,365	0/0:8,0:8:14.97:0,15,188	0/0:17,0:17:39.11:0,39,478	1/1:2,11:12:30.06:305,30,0	0/0:5,0:4:6.01:0,6,63	1/1:0,5:5:12.03:122,12,0	0/0:3,0:3:3.01:0,3,38
chr10	78787871	.	G	GA	8103.38	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=7.178;DP=456;FS=0.433;HRun=1;HaplotypeScore=118.9481;InbreedingCoeff=0.7092;MQ=47.61;MQ0=30;MQRankSum=-2.828;QD=24.86;ReadPosRankSum=0.786;VQSLOD=4.7445;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:29:53.51:260,0,54	1/1:0,4:4:9.03:124,9,0	0/0:20,0:5:12.01:0,12,129	0/0:31,0:8:24.08:0,24,311	1/1:0,14:14:39.06:516,39,0	0/1:10,0:8:2.02:2,0,14	0/1:13,0:10:1.36:19,0,1	1/1:2,2:2:6.02:83,6,0	0/1:19,0:17:29.35:32,0,29	1/1:2,10:10:27.04:337,27,0	1/1:2,15:16:42.06:543,42,0	1/1:2,20:21:51.15:694,51,0	1/1:2,8:10:30.02:375,30,0	0/0:14,0:13:33.07:0,33,407	1/1:3,14:15:33.11:459,33,0	1/1:2,18:18:36.12:493,36,0	0/0:16,0:14:36.08:0,36,448	0/0:15,0:15:39.08:0,39,486	1/1:4,10:12:33.07:397,33,0	1/1:1,8:9:21.05:271,21,0	1/1:4,24:24:21.43:716,21,0	1/1:2,19:19:57.19:788,57,0	1/1:0,19:19:45.15:627,45,0	1/1:0,16:16:40.37:577,40,0	1/1:0,17:17:36.12:499,36,0	0/0:18,0:16:45.14:0,45,573	1/1:2,7:8:21.07:293,21,0	0/0:16,0:16:48.13:0,48,605
chr10	78787872	.	AGG	A	3037.25	PASS	AB=0.774;AC=40;AF=0.714;AN=56;BaseQRankSum=10.034;DP=445;FS=3.511;HRun=4;HaplotypeScore=138.2889;InbreedingCoeff=0.7794;MQ=48.28;MQ0=30;MQRankSum=0.080;QD=9.64;ReadPosRankSum=0.892;VQSLOD=-0.1091;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:5,24:27:99:678,0,107	1/1:4,0:4:2.76:8,3,0	0/0:21,0:6:18.06:0,18,248	0/0:30,0:8:24.08:0,24,398	1/1:14,0:14:32.48:244,32,0	1/1:10,0:8:15.96:97,16,0	1/1:11,1:9:10.44:115,10,0	1/1:5,0:2:4.53:25,5,0	1/1:18,1:17:34.48:175,34,0	1/1:12,0:10:14.90:100,15,0	1/1:16,0:15:30.20:219,30,0	1/1:22,0:21:32.52:148,33,0	0/1:9,0:9:0.85:37,0,1	0/0:15,0:14:32.40:0,32,571	1/1:16,0:14:18.12:52,18,0	1/1:18,0:17:27.26:223,27,0	0/0:16,0:14:35.40:0,35,654	0/0:14,1:15:18.13:0,18,650	1/1:12,1:11:24.74:192,25,0	1/1:7,0:7:15.58:116,16,0	1/1:26,1:24:9.04:158,9,0	1/1:21,0:19:29.57:213,30,0	1/1:19,0:19:18.55:155,19,0	1/1:16,0:16:11.61:70,12,0	1/1:17,0:17:16.90:118,17,0	0/0:17,0:16:45.15:0,45,813	1/1:8,0:7:15.65:93,16,0	0/0:16,0:16:48.16:0,48,874
chr10	78787874	.	G	GA	9073.53	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=10.805;DP=443;FS=3.420;HRun=0;HaplotypeScore=114.5037;InbreedingCoeff=0.8736;MQ=51.40;MQ0=27;MQRankSum=-1.801;QD=29.27;ReadPosRankSum=2.171;VQSLOD=4.8940;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:27:91.40:133,0,91	1/1:4,0:4:9.03:127,9,0	0/0:20,0:6:18.05:0,18,224	0/0:32,0:11:27.98:0,28,376	1/1:15,0:15:39.09:516,39,0	1/1:1,8:8:21.07:303,21,0	1/1:4,8:9:18.03:243,18,0	1/1:5,0:2:6.02:84,6,0	1/1:4,16:18:51.15:724,51,0	1/1:12,0:10:24.07:317,24,0	1/1:15,0:14:42.07:537,42,0	1/1:23,0:22:52.03:694,52,0	1/1:8,1:9:27.07:369,27,0	0/0:15,0:14:36.10:0,36,469	1/1:15,0:13:33.11:461,33,0	1/1:18,0:16:36.12:490,36,0	0/0:15,1:14:33.82:0,34,497	0/0:17,0:16:18.18:0,18,482	1/1:13,0:12:33.03:384,33,0	1/1:7,0:7:18.06:248,18,0	1/1:25,0:22:18.59:707,19,0	1/1:21,0:19:57.19:776,57,0	1/1:19,0:19:45.15:617,45,0	1/1:16,0:16:35.31:540,35,0	1/1:14,0:14:35.34:492,35,0	0/0:16,0:15:45.14:0,45,613	1/1:9,0:8:24.05:310,24,0	0/0:17,0:17:48.16:0,48,670
chr10	78788017	.	T	TA	2579.88	PASS	AC=20;AF=0.385;AN=52;BaseQRankSum=2.380;DP=322;FS=1.185;HRun=1;HaplotypeScore=63.2640;InbreedingCoeff=0.9416;MQ=64.78;MQ0=0;MQRankSum=0.311;QD=20.64;ReadPosRankSum=-2.088;VQSLOD=3.2056;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:54.17:0,54,661	./.	0/0:11,0:11:11.26:0,11,253	0/0:13,0:11:18.07:0,18,314	1/1:4,5:9:9.97:122,10,0	0/0:13,0:13:33.10:0,33,406	0/0:17,0:17:45.04:0,45,541	1/1:3,8:11:27.09:388,27,0	0/0:15,0:15:29.56:0,30,337	1/1:2,10:12:24.08:344,24,0	1/1:2,7:9:5.19:27,5,0	0/0:14,0:14:39.02:0,39,441	0/0:8,0:8:10.60:0,11,87	0/0:7,0:7:12.04:0,12,154	1/1:1,14:15:24.08:355,24,0	1/1:3,10:13:15.04:218,15,0	0/0:16,0:16:39.09:0,39,455	0/0:9,0:9:24.07:0,24,297	1/1:4,10:14:33.08:447,33,0	./.	1/1:12,8:20:32.94:434,33,0	0/0:7,0:7:17.99:0,18,192	0/0:6,0:6:17.95:0,18,204	0/0:13,0:13:27.07:0,27,318	1/1:2,8:10:12.50:160,13,0	0/0:15,0:15:27.07:0,27,331	1/1:1,11:12:23.70:291,24,0	0/0:9,0:9:15.05:0,15,182
chr10	78789578	.	C	CTGG	16632.62	PASS	AB=0.941;AC=27;AF=0.482;AN=56;BaseQRankSum=-11.656;DP=604;FS=4.098;HRun=0;HaplotypeScore=96.0902;InbreedingCoeff=0.9275;MQ=96.18;MQ0=0;MQRankSum=-7.757;QD=57.95;ReadPosRankSum=0.395;VQSLOD=6.7651;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:31:72.20:1720,72,0	1/1:1,13:15:39.13:958,39,0	0/0:33,0:33:96.33:0,96,1775	0/0:30,0:30:81.24:0,81,1430	1/1:3,13:16:24.08:591,24,0	0/0:11,0:11:30.10:0,30,551	0/0:26,0:26:75.25:0,75,1363	1/1:4,17:22:66.21:1549,66,0	0/0:25,0:25:75.25:0,75,1358	1/1:0,18:19:54.19:1331,54,0	1/1:0,8:8:24.08:590,24,0	0/0:16,0:16:48.15:0,48,865	0/0:20,0:20:57.18:0,57,996	0/0:33,0:33:99:0,99,1809	1/1:0,29:30:78.27:1919,78,0	1/1:1,21:23:66.18:1564,66,0	0/0:35,0:35:99:0,105,1915	0/0:26,0:26:78.27:0,78,1437	1/1:0,15:18:54.17:1251,54,0	1/1:1,10:12:27.09:592,27,0	1/1:2,43:46:99:2628,108,0	0/0:13,0:13:39.13:0,39,725	0/0:8,0:8:24.08:0,24,440	0/0:31,0:31:93.26:0,93,1650	1/1:0,14:14:36.12:886,36,0	0/1:15,1:16:25.82:26,0,786	1/1:3,12:17:42.14:1028,42,0	0/0:10,0:10:30.10:0,30,559
chr10	78790527	.	G	GCACGCACACA	3437.89	PASS	AB=0.951;AC=22;AF=0.407;AN=54;BaseQRankSum=5.363;DP=569;FS=2.430;HRun=0;HaplotypeScore=172.4702;InbreedingCoeff=0.0187;MQ=55.76;MQ0=8;MQRankSum=-7.003;QD=12.28;ReadPosRankSum=-3.428;VQSLOD=1.8993;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:15.89:0,16,702	0/1:10,0:11:47.88:141,0,48	0/0:20,0:11:19.34:0,19,234	0/0:36,0:19:29.21:0,29,327	./.	0/0:11,0:18:41.36:0,41,526	0/0:17,0:33:47.88:0,48,466	0/1:22,0:22:99:225,0,293	0/1:5,0:18:34.85:35,0,84	0/1:9,0:8:25.91:212,0,26	0/1:8,0:8:18.99:19,0,19	1/1:2,13:22:9.03:306,9,0	1/1:3,6:15:11.78:338,12,0	0/0:12,0:16:33.05:0,33,747	0/1:13,0:13:9.97:136,0,10	0/1:10,0:10:59.84:206,0,60	0/0:43,0:47:99:0,125,2352	0/0:35,0:38:99:0,107,2306	0/1:16,0:16:99:317,0,106	0/1:14,0:15:59.85:112,0,60	0/1:35,0:33:99:171,0,146	1/1:5,0:12:3.01:126,3,0	1/1:4,8:17:5.60:210,6,0	1/1:3,31:40:15.05:544,15,0	0/1:10,0:11:99:320,0,106	0/0:25,0:25:69.08:0,69,1318	0/1:5,0:5:18.61:19,0,40	0/0:5,0:6:18:0,18,277
chr10	78790555	.	A	ACG	134.88	PASS	AB=0.974;AC=9;AF=0.161;AN=56;BaseQRankSum=7.935;DP=599;FS=4.015;HRun=0;HaplotypeScore=128.9972;InbreedingCoeff=0.0719;MQ=49.99;MQ0=14;MQRankSum=-2.196;QD=0.80;ReadPosRankSum=3.687;VQSLOD=2.1098;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,9:40:99:161,0,184	0/1:13,0:13:0.75:1,0,18	0/0:18,0:10:24.01:0,24,235	0/0:29,0:13:22.81:0,23,207	1/1:18,0:18:0.67:26,1,0	0/0:14,0:13:18.90:0,19,157	0/0:25,0:25:20.52:0,21,153	0/0:28,0:27:67.21:0,67,441	0/1:21,0:21:15.83:16,0,98	0/0:17,0:15:19.18:0,19,121	0/0:16,0:16:14.89:0,15,113	0/0:17,0:17:12.32:0,12,135	0/0:15,0:15:6.15:0,6,101	0/0:14,0:13:29.93:0,30,336	0/0:17,0:17:18.44:0,18,119	0/1:18,0:18:7.43:7,0,16	0/0:45,0:45:99:0,108,1330	0/0:44,0:43:99:0,115,1361	0/0:27,0:23:45.59:0,46,287	0/0:14,0:14:9.90:0,10,80	0/0:38,0:36:20.19:0,20,286	0/0:11,0:11:4.34:0,4,29	0/1:17,0:17:0.51:1,0,41	0/1:28,0:28:9.89:10,0,95	0/1:13,0:13:2.85:32,0,3	0/0:30,0:27:37.41:0,37,791	0/0:7,0:7:11.78:0,12,81	0/0:5,0:5:14.95:0,15,141
chr10	78790557	.	A	ACACACACACACG	5227.55	PASS	AB=0.888;AC=28;AF=0.500;AN=56;BaseQRankSum=-1.419;DP=623;FS=10.611;HRun=0;HaplotypeScore=194.9422;InbreedingCoeff=0.4818;MQ=51.47;MQ0=14;MQRankSum=-2.126;QD=14.48;ReadPosRankSum=-3.558;VQSLOD=2.0119;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:39:99:363,0,141	1/1:3,7:14:5.45:199,5,0	0/0:20,0:12:27.02:0,27,268	0/0:28,0:14:23.05:0,23,233	1/1:2,13:19:3.01:75,3,0	0/0:16,0:15:29.88:0,30,465	0/0:24,0:24:21.41:0,21,261	1/1:29,0:28:32.26:524,32,0	0/0:21,0:21:15.44:0,15,244	1/1:3,10:19:42.28:675,42,0	1/1:18,0:18:20.83:179,21,0	0/1:18,0:18:91.71:92,0,143	0/1:15,0:15:74.84:112,0,75	0/0:15,0:14:27.01:0,27,788	1/1:16,0:16:25.89:286,26,0	1/1:0,15:21:6.02:362,6,0	0/0:46,0:46:90.35:0,90,2307	0/0:45,0:44:98.05:0,98,2101	1/1:28,0:24:42.50:422,43,0	1/1:13,0:14:17.95:308,18,0	1/1:39,0:37:57.10:700,57,0	0/0:11,0:11:3.88:0,4,27	0/1:17,0:17:40.08:91,0,40	0/1:30,0:30:99:219,0,111	0/1:1,9:16:60.17:479,0,60	0/0:30,0:27:68.50:0,68,1285	1/1:7,0:7:11.96:141,12,0	0/0:5,0:5:10.83:0,11,234
chr10	78791308	.	TGCGCGC	T	4916.69	PASS	AC=26;AF=0.481;AN=54;BaseQRankSum=4.054;DP=569;FS=0.482;HRun=0;HaplotypeScore=140.4565;InbreedingCoeff=0.8204;MQ=61.24;MQ0=3;MQRankSum=-1.917;QD=17.50;ReadPosRankSum=-0.231;VQSLOD=4.4614;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:2.24:53,2,0	1/1:12,0:12:5.38:63,5,0	0/0:7,0:5:9.54:0,10,104	0/0:11,0:6:11.70:0,12,112	0/0:13,2:15:0:0,0,0	1/1:26,0:26:8.98:128,9,0	1/1:20,2:22:51.14:992,51,0	1/1:4,12:16:36.03:621,36,0	1/1:20,0:20:9.01:97,9,0	1/1:26,0:26:46.09:954,46,0	./.	0/0:17,0:17:39.05:0,39,686	0/0:14,0:14:32.88:0,33,605	0/0:26,0:25:63.22:0,63,1643	0/0:20,0:20:0:0,0,0	1/1:23,0:23:6.02:110,6,0	0/0:31,0:31:90.30:0,90,2472	0/0:26,0:29:72.25:0,72,1895	1/1:13,0:13:33.05:506,33,0	1/1:18,0:18:6.02:108,6,0	1/1:31,6:37:39.62:934,40,0	0/0:22,0:21:44.97:0,45,868	0/0:13,0:13:8.64:0,9,158	0/0:34,0:34:66.64:0,67,1337	1/1:17,0:17:6.02:110,6,0	0/0:25,0:25:63.99:0,64,1232	1/1:18,0:18:15.05:240,15,0	0/0:8,0:8:18.06:0,18,362
chr10	78791311	.	GCGCGCGCACA	G	5864.44	PASS	AB=0.519;AC=29;AF=0.537;AN=54;BaseQRankSum=4.225;DP=579;FS=2.810;HRun=0;HaplotypeScore=162.6624;InbreedingCoeff=0.8177;MQ=60.74;MQ0=5;MQRankSum=-0.726;QD=19.42;ReadPosRankSum=-1.193;VQSLOD=3.9302;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,1:33:1.93:98,2,0	1/1:1,11:12:6.02:155,6,0	0/0:7,0:5:9.60:0,10,97	0/0:11,0:6:11.70:0,12,112	1/1:6,0:14:2.98:80,3,0	1/1:0,0:25:9.03:212,9,0	1/1:17,0:21:51.14:1047,51,0	1/1:14,0:14:36.03:621,36,0	1/1:20,0:20:11.63:228,12,0	1/1:1,24:25:55.10:1065,55,0	0/1:1,13:14:0:0,0,0	0/0:20,0:19:38.82:0,39,806	0/0:14,0:14:32.62:0,33,716	0/0:25,0:24:63.22:0,63,2120	./.	1/1:2,1:23:5.88:203,6,0	0/0:36,0:36:99:0,102,3552	0/0:31,0:30:75.26:0,75,2744	1/1:0,0:12:36.04:606,36,0	1/1:2,0:16:6.02:136,6,0	1/1:36,0:37:39.62:961,40,0	0/0:23,0:22:35.87:0,36,947	0/0:13,0:13:9:0,9,212	0/0:39,0:38:66.64:0,67,1424	1/1:0,0:18:6.02:167,6,0	0/0:25,0:25:63.69:0,64,1523	1/1:1,0:17:8.44:286,8,0	0/0:11,0:11:18.06:0,18,436
chr10	78791313	.	GCGCGCACACA	G	4150.64	PASS	AB=1.000;AC=28;AF=0.519;AN=54;BaseQRankSum=9.591;DP=570;FS=10.511;HRun=0;HaplotypeScore=165.2790;InbreedingCoeff=0.7647;MQ=60.82;MQ0=5;MQRankSum=0.157;QD=13.98;ReadPosRankSum=-0.553;VQSLOD=2.0405;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:1.93:80,2,0	1/1:11,0:11:6.02:119,6,0	0/0:7,0:5:5.33:0,5,102	0/0:11,0:6:11.30:0,11,84	1/1:15,1:15:5.99:94,6,0	1/1:25,0:25:9.03:178,9,0	1/1:21,0:21:45.12:657,45,0	1/1:12,0:12:26.48:359,26,0	1/1:2,19:21:11.58:293,12,0	1/1:24,0:24:38.59:673,39,0	0/1:13,0:13:0:0,0,0	0/0:22,0:21:31.22:0,31,557	0/0:15,0:15:29.70:0,30,522	0/0:25,0:24:63.18:0,63,1864	./.	1/1:21,0:22:5.88:172,6,0	0/0:36,0:36:99:0,102,3333	0/0:30,0:29:75.26:0,75,2677	1/1:13,0:13:27.03:396,27,0	1/1:14,0:14:6.02:109,6,0	1/1:36,0:36:44.62:623,45,0	0/0:21,0:20:40.95:0,41,742	0/0:12,0:12:8.99:0,9,169	0/0:38,0:37:63.17:0,63,1110	1/1:19,0:19:6.02:148,6,0	0/0:24,0:24:50.44:0,50,1290	0/1:17,0:17:7.06:250,0,7	0/0:11,0:11:18.06:0,18,359
chr10	78791317	.	GCACA	G	1591.35	PASS	AB=0.860;AC=35;AF=0.729;AN=48;BaseQRankSum=6.218;DP=584;FS=47.322;HRun=0;HaplotypeScore=137.6347;InbreedingCoeff=0.4552;MQ=60.03;MQ0=7;MQRankSum=-2.410;QD=3.86;ReadPosRankSum=-1.715;VQSLOD=0.7021;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:2.65:33,3,0	1/1:11,0:11:5.77:65,6,0	./.	./.	1/1:17,0:16:8.89:131,9,0	1/1:26,0:25:8.91:72,9,0	1/1:17,0:17:5.96:55,6,0	0/0:15,0:15:0:0,0,1	1/1:21,0:22:12.46:132,12,0	1/1:25,0:25:9:111,9,0	./.	1/1:14,8:21:2.72:46,3,0	1/1:6,6:12:6.02:93,6,0	0/0:25,0:24:30.10:0,30,635	./.	1/1:24,0:24:6.02:68,6,0	0/0:37,0:37:60.15:0,60,1132	0/0:31,1:32:10.76:0,11,884	1/1:14,0:14:11.96:116,12,0	1/1:14,0:14:3.01:36,3,0	1/1:38,0:38:6.01:64,6,0	1/1:15,8:22:12.51:175,13,0	0/1:6,7:13:0:0,0,0	1/1:27,11:36:18.06:278,18,0	1/1:19,0:19:6.01:56,6,0	0/1:24,0:26:78.22:134,0,78	0/1:17,0:17:3.55:72,0,4	0/0:4,0:11:5.49:0,5,24
chr10	78792229	.	AC	A	3214.31	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.054;DP=717;FS=6.065;HRun=3;HaplotypeScore=91.6440;InbreedingCoeff=0.9998;MQ=84.19;MQ0=0;MQRankSum=1.188;QD=26.13;ReadPosRankSum=3.449;VQSLOD=2.8222;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,120,1673	0/0:14,0:14:42.14:0,42,603	0/0:20,0:20:50.72:0,51,646	0/0:33,0:33:81.25:0,81,1076	0/0:25,0:25:75.22:0,75,1038	0/0:27,0:27:78.25:0,78,1093	0/0:29,0:29:84.28:0,84,1196	0/0:33,0:33:81.21:0,81,1084	0/0:28,0:28:75.20:0,75,1007	0/0:24,0:24:66.22:0,66,943	0/0:24,0:24:63.20:0,63,885	1/1:3,26:29:66.24:751,66,0	1/1:2,25:27:64.50:672,65,0	0/0:15,0:15:39.12:0,39,542	0/0:37,0:37:99:0,105,1488	0/0:21,0:21:60.20:0,60,861	0/0:29,0:29:84.28:0,84,1200	0/0:15,0:15:45.15:0,45,647	0/0:21,0:21:60.16:0,60,819	0/0:19,0:19:54.15:0,54,753	0/0:62,0:62:99:0,181,2540	1/1:2,29:31:86.12:964,86,0	1/1:1,18:19:54.12:580,54,0	1/1:1,16:17:39.10:424,39,0	0/0:19,0:19:48.11:0,48,649	0/0:25,0:25:75.25:0,75,1079	0/0:18,0:18:51.17:0,51,726	0/0:10,0:10:30.10:0,30,432
chr10	78793260	.	TCCTTTCTCTCTTTCTC	T	25898.40	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=10.316;DP=614;FS=0.469;HRun=0;HaplotypeScore=207.2002;InbreedingCoeff=0.9211;MQ=56.04;MQ0=2;MQRankSum=-3.956;QD=52.11;ReadPosRankSum=2.759;VQSLOD=4.4462;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:0,0:27:20.99:0,21,373	1/1:0,9:9:8.92:184,9,0	0/0:19,0:12:28.94:0,29,511	0/0:20,0:13:36.12:0,36,1330	1/1:0,29:29:47.92:993,48,0	1/1:0,21:21:39.13:1896,39,0	1/1:0,24:24:18.06:875,18,0	1/1:1,33:34:99:1522,100,0	1/1:0,18:18:12.04:516,12,0	1/1:0,22:22:65.90:1836,66,0	1/1:0,22:22:41.99:1349,42,0	1/1:0,21:21:21.07:1021,21,0	1/1:0,24:24:30.10:1301,30,0	1/1:0,24:24:27.09:1157,27,0	1/1:0,28:28:32.78:1449,33,0	1/1:0,26:26:27.09:1313,27,0	0/0:22,0:22:66.20:0,66,3573	0/0:28,0:28:84.25:0,84,5055	1/1:0,17:17:51.10:1214,51,0	1/1:0,14:14:20.51:761,21,0	1/1:0,11:11:3.01:146,3,0	1/1:0,30:30:57.05:1912,57,0	1/1:0,20:20:13.25:726,13,0	1/1:0,25:25:23.90:784,24,0	1/1:0,17:17:18.06:876,18,0	1/1:0,31:31:87.21:2703,87,0	1/1:0,26:26:23.63:1166,24,0	1/1:4,0:4:12.01:198,12,0
chr10	78794344	.	TA	T	10976.31	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=5.239;DP=637;FS=21.901;HRun=10;HaplotypeScore=103.6890;InbreedingCoeff=0.8571;MQ=79.06;MQ0=0;MQRankSum=-1.382;QD=20.52;ReadPosRankSum=2.817;VQSLOD=3.9646;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:22:45.58:0,46,233	1/1:2,7:9:20.99:182,21,0	0/0:24,1:25:9.44:0,9,386	0/1:12,0:12:9.65:10,0,88	1/1:1,30:31:71.96:625,72,0	1/1:2,21:23:56.99:495,57,0	1/1:4,14:18:11.81:331,12,0	1/1:9,18:27:23.80:436,24,0	1/1:0,20:20:56.99:495,57,0	1/1:0,16:16:47.99:417,48,0	1/1:5,29:34:83.97:727,84,0	1/1:3,19:22:23.81:436,24,0	1/1:3,15:18:44.98:391,45,0	1/1:2,19:21:56.98:495,57,0	1/1:5,28:33:83.98:729,84,0	1/1:5,18:23:50.97:443,51,0	0/0:29,0:29:66.16:0,66,721	0/0:26,0:26:63.15:0,63,687	1/1:2,22:25:67.01:547,67,0	1/1:5,15:20:38.98:339,39,0	1/1:2,15:17:44.98:391,45,0	1/1:4,20:24:56.98:495,57,0	1/1:2,24:26:62.12:546,62,0	1/1:1,25:26:65.98:573,66,0	1/1:4,23:27:59.98:521,60,0	1/1:5,25:30:74.97:651,75,0	1/1:0,22:22:56.99:495,57,0	1/1:3,8:11:23.99:208,24,0
chr10	78796785	.	T	TC	22865.23	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-15.528;DP=754;FS=20.423;HRun=2;HaplotypeScore=79.6095;InbreedingCoeff=0.9946;MQ=89.23;MQ0=0;MQRankSum=-2.617;QD=37.79;ReadPosRankSum=5.243;VQSLOD=2.9305;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:44:99:1597,111,0	1/1:0,9:10:30.08:398,30,0	0/0:28,0:28:78.15:0,78,894	0/0:27,0:27:71.35:0,71,839	1/1:1,25:26:75.20:1055,75,0	1/1:3,29:32:75.25:1080,75,0	1/1:1,28:29:84.28:1210,84,0	1/1:3,42:45:99:1699,123,0	1/1:0,26:26:72.24:1036,72,0	1/1:1,26:26:78.25:1103,78,0	1/1:1,19:20:48.16:691,48,0	1/1:1,20:21:57.19:821,57,0	1/1:0,22:22:57.19:820,57,0	1/1:0,37:37:93.31:1339,93,0	1/1:1,31:32:87.29:1253,87,0	1/1:1,26:27:69.23:993,69,0	0/0:29,0:29:81.19:0,81,972	0/0:17,0:17:45.11:0,45,541	1/1:0,19:19:57.16:763,57,0	1/1:1,21:22:57.14:796,57,0	1/1:1,43:44:99:1598,111,0	1/1:0,14:14:42.14:605,42,0	1/1:2,25:27:68.91:993,69,0	1/1:0,28:28:72.24:1037,72,0	1/1:1,28:29:72.24:1037,72,0	0/0:34,2:36:12.83:0,13,1028	1/1:1,23:24:66.22:943,66,0	0/0:12,0:12:36.11:0,36,446
chr10	78796816	.	TAGGTCAGGGGA	T	4824.18	PASS	AB=0.542;AC=3;AF=0.054;AN=56;BaseQRankSum=-0.304;DP=745;FS=4.457;HRun=0;HaplotypeScore=280.4295;InbreedingCoeff=0.6470;MQ=87.99;MQ0=0;MQRankSum=-10.817;QD=91.02;ReadPosRankSum=3.794;VQSLOD=4.1591;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,6861	0/0:10,0:10:30.10:0,30,1634	0/0:25,0:25:69.17:0,69,2985	0/0:28,0:28:81.28:0,81,4294	0/0:27,0:27:81.25:0,81,4168	0/0:29,0:29:81.28:0,81,4542	0/0:37,0:37:99:0,108,5794	0/0:45,0:45:99:0,129,6563	0/0:23,0:23:63.22:0,63,3530	0/0:25,0:25:75.24:0,75,3686	0/0:10,0:10:30.10:0,30,1583	0/0:26,0:26:78.25:0,78,4213	0/0:19,0:19:51.15:0,51,2810	0/0:41,0:41:99:0,114,6230	0/0:35,0:35:99:0,105,5982	0/0:28,0:28:81.28:0,81,4575	0/0:33,0:33:96.31:0,96,5290	0/0:16,0:16:48.16:0,48,2711	0/0:20,0:20:60.18:0,60,2584	0/0:18,0:18:54.19:0,54,3043	0/0:38,0:37:99:0,108,5947	0/0:10,0:10:30.10:0,30,1658	0/0:26,0:26:72.25:0,72,4010	0/0:32,0:32:87.30:0,87,4939	0/0:25,0:25:66.23:0,66,3736	0/1:6,33:39:99:3519,0,176	0/0:21,0:21:63.20:0,63,3411	1/1:0,14:14:36.12:1305,36,0
chr10	78797818	.	AC	A	3438.68	PASS	AB=0.917;AC=50;AF=0.962;AN=52;BaseQRankSum=-2.175;DP=238;FS=0.000;HRun=1;HaplotypeScore=42.0607;InbreedingCoeff=-0.1199;MQ=59.52;MQ0=0;MQRankSum=-3.708;QD=14.51;ReadPosRankSum=2.125;VQSLOD=3.0177;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:27.09:377,27,0	1/1:1,6:7:12.01:148,12,0	0/1:4,1:5:29.97:30,0,31	0/1:5,0:5:17.20:27,0,17	1/1:1,10:11:5.99:63,6,0	1/1:0,1:1:3.01:42,3,0	1/1:2,15:17:11.97:123,12,0	1/1:0,6:6:9.03:126,9,0	1/1:0,8:8:6.02:84,6,0	1/1:0,8:8:24.04:310,24,0	./.	1/1:2,10:12:8.97:86,9,0	1/1:1,7:8:8.99:104,9,0	1/1:0,10:10:3.01:42,3,0	1/1:0,14:14:3.01:42,3,0	1/1:0,10:10:6.02:84,6,0	1/1:0,9:9:12.04:166,12,0	1/1:1,6:7:15.05:208,15,0	./.	1/1:0,9:9:6.02:84,6,0	1/1:2,4:6:2.99:23,3,0	1/1:0,8:8:6.02:83,6,0	1/1:0,7:7:3.01:42,3,0	1/1:1,11:12:2.97:20,3,0	1/1:1,4:5:9.01:107,9,0	1/1:1,15:16:45.15:601,45,0	1/1:2,8:10:24.02:296,24,0	1/1:0,3:3:9.03:126,9,0
chr10	78804642	.	A	AC	1054.74	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.929;DP=654;FS=2.660;HRun=0;HaplotypeScore=61.9295;InbreedingCoeff=0.9979;MQ=90.11;MQ0=0;MQRankSum=-3.488;QD=36.37;ReadPosRankSum=0.422;VQSLOD=3.2916;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:72.25:1150,72,0	0/0:8,0:8:24.08:0,24,336	0/0:33,0:33:93.28:0,93,1262	0/0:32,0:32:87.19:0,87,1145	0/0:21,0:21:63.19:0,63,863	0/0:20,0:20:60.19:0,60,821	0/0:25,0:25:69.23:0,69,964	0/0:29,0:29:87.27:0,87,1186	0/0:19,0:19:57.19:0,57,795	0/0:21,0:21:63.20:0,63,853	0/0:25,0:25:75.25:0,75,1049	0/0:24,0:24:52.93:0,53,865	0/0:20,0:20:60.20:0,60,829	0/0:21,0:21:60.20:0,60,838	0/0:25,0:25:75.22:0,75,1027	0/0:31,0:31:93.30:0,93,1282	0/0:24,0:24:72.22:0,72,988	0/0:18,0:18:51.17:0,51,713	0/0:21,0:21:63.21:0,63,881	0/0:48,0:48:99:0,141,1892	0/0:23,0:23:66.22:0,66,922	0/0:15,0:15:45.15:0,45,629	0/0:18,0:18:54.18:0,54,754	0/0:13,0:13:39.13:0,39,545	0/0:21,0:21:63.20:0,63,864	0/0:24,0:24:72.23:0,72,992	0/0:24,0:23:72.24:0,72,1004	0/0:22,0:22:66.22:0,66,922
chr10	78804756	.	GGTGTGTGTGTGTGTGT	G	3036.09	PASS	AB=0.872;AC=22;AF=0.393;AN=56;BaseQRankSum=2.572;DP=602;FS=20.716;HRun=0;HaplotypeScore=224.0099;InbreedingCoeff=0.0166;MQ=66.42;MQ0=20;MQRankSum=0.590;QD=8.34;ReadPosRankSum=-0.702;VQSLOD=0.6079;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:20.88:0,21,272	0/1:5,5:10:12.86:191,0,13	0/0:29,0:21:9.42:0,9,70	0/0:39,0:24:14.88:0,15,109	0/1:15,0:14:3.05:63,0,3	0/0:14,0:14:18.01:0,18,202	0/0:24,0:23:11.04:0,11,211	0/1:30,0:29:40.08:110,0,40	0/0:11,0:14:9.01:0,9,300	0/1:12,10:20:84.96:188,0,85	1/1:6,6:11:5.75:112,6,0	0/1:16,0:15:3.16:3,0,99	0/0:11,0:11:26.73:0,27,210	0/1:13,0:12:2.05:2,0,81	1/1:13,18:31:3:410,3,0	0/1:18,16:33:24.29:432,0,24	0/0:16,0:15:23.99:0,24,596	0/0:20,0:20:7.67:0,8,919	0/1:25,0:23:77.24:90,0,77	1/1:8,1:12:5.92:237,6,0	0/1:40,0:39:32.38:462,0,32	0/0:17,0:16:14.97:0,15,212	0/0:25,0:25:3.46:0,3,125	0/1:19,0:16:23.54:24,0,108	1/1:7,11:18:6.02:226,6,0	0/1:20,12:32:13.25:306,0,13	0/1:19,6:25:46.36:248,0,46	1/1:5,3:5:3.01:95,3,0
chr10	78804789	.	GTGTGTGTGTGTGTA	G	2428.58	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=6.837;DP=600;FS=17.969;HRun=0;HaplotypeScore=206.3258;InbreedingCoeff=0.1347;MQ=48.85;MQ0=35;MQRankSum=-0.208;QD=7.23;ReadPosRankSum=5.931;VQSLOD=0.9532;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:39:48.35:0,48,1069	0/1:11,0:11:72.04:72,0,80	0/0:12,0:3:2.80:0,3,13	0/1:17,0:7:9.08:9,0,9	0/0:23,0:21:18.86:0,19,231	0/1:11,0:11:9.25:9,0,56	0/1:25,0:22:43.29:124,0,43	0/0:23,0:17:35.60:0,36,278	0/0:13,0:12:15.02:0,15,331	0/0:31,0:27:48.58:0,49,395	0/1:10,0:9:16.15:16,0,40	1/1:20,1:19:41.97:447,42,0	1/1:16,0:14:33.39:249,33,0	1/1:13,0:12:16.02:146,16,0	0/1:26,0:26:91.21:217,0,91	0/1:25,0:24:55.16:231,0,55	0/1:25,0:24:15.41:15,0,660	0/0:22,0:20:7.50:0,8,931	0/0:15,0:15:20.12:0,20,119	0/1:18,0:18:99:155,0,147	0/0:53,0:51:19.21:0,19,358	1/1:25,0:24:42.25:341,42,0	1/1:8,13:21:1.84:8,2,0	1/1:25,0:21:20.65:280,21,0	0/1:22,0:22:99:112,0,121	0/0:29,0:28:20.33:0,20,235	0/1:17,0:16:99:136,0,103	1/1:8,0:3:3.01:44,3,0
chr10	78806857	.	TCTC	T	14462.29	PASS	AB=0.969;AC=49;AF=0.875;AN=56;BaseQRankSum=5.859;DP=722;FS=0.560;HRun=0;HaplotypeScore=106.8207;InbreedingCoeff=0.8070;MQ=61.00;MQ0=22;MQRankSum=1.793;QD=22.39;ReadPosRankSum=3.651;VQSLOD=4.5139;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,26:35:26.08:587,26,0	1/1:5,8:13:24.08:347,24,0	0/0:23,0:7:9.03:0,9,158	0/1:29,1:14:22.29:22,0,300	1/1:5,13:17:36.08:520,36,0	1/1:7,28:33:45.15:651,45,0	1/1:6,16:21:36.09:520,36,0	1/1:11,14:23:36.05:434,36,0	1/1:4,21:24:57.19:821,57,0	1/1:4,31:35:93.31:1339,93,0	1/1:4,16:20:39.05:517,39,0	1/1:8,29:37:55.77:861,56,0	1/1:3,13:16:30.10:433,30,0	1/1:3,23:25:45.15:651,45,0	1/1:5,24:29:54.18:781,54,0	1/1:6,28:34:42.14:607,42,0	0/0:28,0:26:51.13:0,51,910	0/0:23,0:23:48.37:0,48,1004	1/1:13,15:25:45.05:593,45,0	1/1:3,20:22:44.78:535,45,0	1/1:4,36:40:78.26:1128,78,0	1/1:2,20:22:48.12:670,48,0	1/1:4,10:13:14.79:217,15,0	1/1:2,24:26:48.16:693,48,0	1/1:5,18:23:36.12:514,36,0	1/1:3,0:28:45.34:270,45,0	1/1:5,23:28:45.15:649,45,0	1/1:2,0:10:14.87:104,15,0
chr10	78808191	.	T	TA	4549.26	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-11.468;DP=556;FS=0.000;HRun=8;HaplotypeScore=63.7276;InbreedingCoeff=0.9322;MQ=73.05;MQ0=0;MQRankSum=-1.220;QD=26.45;ReadPosRankSum=2.124;VQSLOD=5.5418;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.02:0,54,494	0/0:16,0:16:48.02:0,48,436	0/0:11,0:11:29.92:0,30,255	0/1:8,0:8:5.73:6,0,89	0/0:30,0:30:78.02:0,78,714	1/1:2,23:25:63.15:713,63,0	1/1:1,15:16:33.06:366,33,0	0/0:27,0:27:72.02:0,72,652	1/1:0,12:12:36.11:415,36,0	0/0:30,0:30:72.04:0,72,659	0/0:27,0:27:69.01:0,69,623	1/1:5,15:20:14.67:421,15,0	1/1:2,9:11:27.08:312,27,0	1/1:2,11:13:27.08:311,27,0	0/0:15,0:15:36.07:0,36,344	0/0:23,0:23:60.01:0,60,541	0/0:27,0:27:66.01:0,66,598	0/0:18,0:18:48.02:0,48,438	0/0:15,0:15:39:0,39,351	0/0:31,0:31:90.04:0,90,821	0/0:8,0:8:18:0,18,165	1/1:4,22:26:66.20:759,66,0	1/1:1,27:28:75.22:866,75,0	1/1:1,12:13:33.10:381,33,0	0/0:23,0:23:51.02:0,51,467	0/0:24,0:24:33.61:0,34,486	0/0:26,0:26:69.02:0,69,626	0/0:13,0:13:30.01:0,30,275
chr10	78809011	.	ACACACACACG	A	5902.67	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=-0.665;DP=601;FS=9.804;HRun=0;HaplotypeScore=166.3806;InbreedingCoeff=0.3631;MQ=58.93;MQ0=17;MQRankSum=-2.027;QD=14.94;ReadPosRankSum=-1.163;VQSLOD=2.9165;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:23:99:190,0,140	1/1:2,10:12:10.10:304,10,0	0/0:19,0:12:21.22:0,21,258	0/0:18,0:7:7.25:0,7,122	1/1:3,20:23:8.96:218,9,0	0/0:25,0:25:18.05:0,18,305	0/0:26,0:26:12.51:0,13,181	1/1:25,0:22:56.72:458,57,0	0/1:19,0:19:99:151,0,598	1/1:5,20:24:40.56:683,41,0	1/1:4,11:14:9.50:300,10,0	0/1:18,0:17:99:101,0,485	0/1:23,0:23:58.45:58,0,1266	0/0:17,0:17:15.72:0,16,803	1/1:6,28:34:15.52:502,16,0	1/1:26,1:26:26.98:512,27,0	0/0:28,0:28:60.02:0,60,1589	0/0:13,0:12:23.86:0,24,430	0/1:20,0:19:99:225,0,110	1/1:6,21:27:21.47:556,21,0	1/1:30,0:29:29.02:504,29,0	0/0:21,0:20:20.39:0,20,464	0/1:20,0:19:14.43:14,0,833	0/0:39,0:39:47.44:0,47,1068	1/1:1,13:14:3.01:100,3,0	0/1:19,0:19:20.53:477,0,21	1/1:15,2:17:44.86:531,45,0	0/1:2,0:2:17.94:18,0,92
chr10	78809013	.	ACACACACG	A	5282.60	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=-0.088;DP=575;FS=5.516;HRun=0;HaplotypeScore=145.8439;InbreedingCoeff=0.3944;MQ=59.82;MQ0=15;MQRankSum=-0.383;QD=13.55;ReadPosRankSum=-0.489;VQSLOD=3.4447;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:38.85:312,39,0	0/1:11,0:11:3.35:191,0,3	0/0:19,0:12:21.22:0,21,258	0/0:18,0:7:7.25:0,7,122	1/1:21,0:20:8.96:153,9,0	0/0:23,0:23:16.89:0,17,153	0/0:27,0:27:11.52:0,12,77	1/1:24,0:22:60.22:471,60,0	0/1:19,0:19:99:153,0,392	1/1:24,0:23:41.38:555,41,0	1/1:13,0:12:9.41:202,9,0	0/1:18,0:17:99:123,0,354	0/1:23,0:23:65.66:66,0,863	0/1:15,0:15:8.31:8,0,480	1/1:30,0:30:15.52:339,16,0	1/1:6,21:26:23.73:636,24,0	0/0:26,0:26:59.91:0,60,1258	0/0:13,0:12:23.86:0,24,378	1/1:18,0:17:25.97:231,26,0	1/1:24,0:24:21.42:372,21,0	1/1:29,0:28:19.03:439,19,0	0/0:22,0:21:11.16:0,11,242	0/1:20,0:19:56.77:57,0,599	0/0:37,0:37:38.41:0,38,650	1/1:13,0:13:3.01:68,3,0	0/1:19,0:19:6.90:450,0,7	1/1:15,0:15:44.85:440,45,0	0/1:2,0:2:17.94:18,0,73
chr10	78809017	.	ACACG	A	5493.10	PASS	AB=0.990;AC=38;AF=0.679;AN=56;BaseQRankSum=1.020;DP=568;FS=1.639;HRun=0;HaplotypeScore=116.5790;InbreedingCoeff=0.2548;MQ=66.40;MQ0=14;MQRankSum=-1.937;QD=11.79;ReadPosRankSum=1.483;VQSLOD=4.1647;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:22:30.90:339,31,0	0/1:11,0:11:7.92:107,0,8	0/0:23,0:16:33.06:0,33,347	0/0:21,0:10:9.40:0,9,162	1/1:20,0:19:8.96:97,9,0	1/1:2,18:20:9.03:179,9,0	1/1:1,25:26:8.80:178,9,0	1/1:25,0:23:64.95:511,65,0	0/1:19,0:19:93.01:217,0,93	1/1:23,0:23:45.56:450,46,0	1/1:13,0:12:8.83:118,9,0	0/1:18,0:17:19.11:156,0,19	0/1:21,0:21:99:158,0,130	0/1:16,0:16:27.83:229,0,28	1/1:29,0:29:15.05:199,15,0	1/1:26,0:25:15.63:309,16,0	0/0:25,0:25:30.62:0,31,699	0/0:13,0:12:23.86:0,24,274	1/1:17,0:16:34.86:307,35,0	1/1:24,0:24:20.95:231,21,0	1/1:29,0:28:62.81:502,63,0	0/0:20,0:19:1.38:0,1,5	0/1:21,0:20:99:207,0,136	0/1:32,3:35:9.47:117,0,9	1/1:13,0:13:2.88:40,3,0	1/1:20,0:20:21.18:439,21,0	1/1:15,0:15:44.85:383,45,0	0/1:2,0:2:17.94:18,0,36
chr10	78809019	.	ACG	A	5861.27	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=1.734;DP=550;FS=12.785;HRun=0;HaplotypeScore=100.1207;InbreedingCoeff=0.5521;MQ=66.94;MQ0=13;MQRankSum=-2.297;QD=12.52;ReadPosRankSum=1.406;VQSLOD=4.1110;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:22:47.37:380,47,0	1/1:11,0:11:8.62:77,9,0	0/0:23,0:16:32.84:0,33,345	0/0:21,0:10:9.40:0,9,162	1/1:20,0:19:8.94:69,9,0	1/1:20,0:20:9.01:83,9,0	1/1:26,0:26:8.64:82,9,0	1/1:4,24:26:74.63:581,75,0	0/1:19,0:19:23.36:314,0,23	1/1:23,0:23:47.92:398,48,0	1/1:13,0:12:8.89:77,9,0	1/1:13,1:13:29.90:248,30,0	1/1:15,2:17:3.10:321,3,0	1/1:13,2:15:38.49:364,38,0	1/1:29,0:29:15:129,15,0	1/1:25,0:24:23.92:208,24,0	0/0:25,0:25:37.62:0,38,482	0/0:13,0:12:26.82:0,27,241	1/1:16,0:15:35.61:308,36,0	1/1:24,0:24:20.85:163,21,0	1/1:28,0:27:62.81:502,63,0	1/1:4,11:14:6.02:83,6,0	0/1:20,0:20:3.37:240,0,3	1/1:8,23:31:30.08:385,30,0	1/1:13,0:13:3:26,3,0	1/1:20,0:20:31.90:425,32,0	1/1:16,0:16:47.82:380,48,0	0/1:2,0:2:16.96:18,0,17
chr10	78810468	.	TTTCTCTTC	T	1141.93	PASS	AB=0.964;AC=3;AF=0.054;AN=56;BaseQRankSum=6.479;DP=701;FS=21.055;HRun=0;HaplotypeScore=193.2996;InbreedingCoeff=0.7199;MQ=80.94;MQ0=0;MQRankSum=-5.564;QD=24.30;ReadPosRankSum=1.774;VQSLOD=1.9537;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:66.21:0,66,2633	0/0:10,0:10:27.08:0,27,1030	0/0:26,0:27:50.32:0,50,1855	0/0:22,0:22:50.32:0,50,1764	0/0:35,0:35:93.29:0,93,3648	0/0:18,0:18:54.17:0,54,2244	0/0:14,0:14:42.14:0,42,1828	0/0:30,0:30:84.27:0,84,3211	1/1:1,19:20:45.15:1236,45,0	0/0:38,0:38:99:0,108,4411	0/0:27,0:27:78.06:0,78,3360	0/0:31,0:31:90.30:0,90,3702	0/0:28,0:28:84.21:0,84,3148	0/0:25,0:25:63.22:0,63,2495	0/0:16,0:16:39.13:0,39,1589	0/1:26,1:27:4.19:4,0,2659	0/0:26,0:26:75.23:0,75,3147	0/0:21,0:21:60.21:0,60,2404	0/0:24,0:24:57.19:0,57,2291	0/0:30,0:30:84.29:0,84,3566	0/0:12,0:12:36.12:0,36,1534	0/0:27,0:27:81.26:0,81,3312	0/0:22,0:22:66.22:0,66,2767	0/0:21,0:21:48.15:0,48,1983	0/0:24,0:24:69.24:0,69,2961	0/0:39,0:39:99:0,108,4621	0/0:31,0:31:87.28:0,87,3491	0/0:28,0:28:78.23:0,78,3071
chr10	78814242	.	A	AT	7719.53	PASS	AB=0.667;AC=47;AF=0.839;AN=56;BaseQRankSum=-2.445;DP=481;FS=16.691;HRun=10;HaplotypeScore=69.3528;InbreedingCoeff=0.7056;MQ=74.14;MQ0=9;MQRankSum=-1.427;QD=23.39;ReadPosRankSum=-0.331;VQSLOD=3.7964;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,22:30:77.96:815,78,0	1/1:1,9:9:23.98:249,24,0	0/0:51,0:20:17.63:0,18,251	0/0:41,0:23:3.66:0,4,135	1/1:4,19:23:42.11:465,42,0	1/1:1,11:12:21.04:223,21,0	1/1:2,12:14:30:314,30,0	1/1:15,14:29:42.14:587,42,0	1/1:4,8:12:24.05:255,24,0	1/1:1,15:16:45.09:480,45,0	1/1:7,19:26:65.99:698,66,0	1/1:2,9:11:15.04:165,15,0	1/1:1,7:8:15.04:166,15,0	1/1:1,4:5:6.02:66,6,0	1/1:3,10:13:33.09:361,33,0	1/1:5,5:10:20.97:214,21,0	0/0:30,0:30:77.61:0,78,651	0/0:26,0:26:66.91:0,67,557	1/1:8,16:24:48.13:530,48,0	1/1:2,8:10:30.03:311,30,0	0/1:2,2:4:17.03:57,0,17	1/1:2,1:3:3.01:33,3,0	1/1:2,3:5:9.02:99,9,0	1/1:0,3:3:3.01:33,3,0	1/1:1,11:12:36.10:396,36,0	1/1:2,15:17:39.85:443,40,0	1/1:9,12:21:46.01:494,46,0	1/1:3,9:11:24.06:263,24,0
chr10	78814258	.	CTT	C	2944.30	PASS	AB=0.849;AC=29;AF=0.537;AN=54;BaseQRankSum=6.306;DP=436;FS=5.266;HRun=12;HaplotypeScore=90.8260;InbreedingCoeff=0.7456;MQ=71.23;MQ0=10;MQRankSum=-2.472;QD=11.20;ReadPosRankSum=2.494;VQSLOD=2.3773;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,20:35:45.92:442,46,0	1/1:3,5:7:15.02:152,15,0	0/0:38,0:16:14.82:0,15,214	0/1:40,0:22:0.50:1,0,164	1/1:8,7:16:23.75:225,24,0	0/0:13,0:15:35.07:0,35,419	0/1:10,1:12:12.44:12,0,189	1/1:11,8:19:23.97:244,24,0	0/1:4,1:10:14.99:15,0,43	1/1:6,4:11:17.75:164,18,0	1/1:7,14:22:29.61:345,30,0	0/0:8,0:8:18.01:0,18,228	0/0:6,0:6:6.02:0,6,89	0/0:7,0:7:12.85:0,13,135	1/1:9,5:14:26.99:259,27,0	1/1:0,5:5:15.03:152,15,0	0/0:30,0:32:92.73:0,93,1215	0/0:25,0:25:47.90:0,48,728	1/1:5,13:18:16.22:366,16,0	1/1:4,8:12:14.99:152,15,0	1/1:4,2:6:2.97:30,3,0	./.	0/0:6,0:5:8.94:0,9,84	0/0:6,0:6:11.99:0,12,152	1/1:5,10:15:27.02:275,27,0	0/0:17,0:17:33.10:0,33,472	1/1:7,11:19:32.77:317,33,0	0/0:9,0:9:15.05:0,15,218
chr10	78814462	.	G	GAGAA	6094.72	PASS	AB=0.910;AC=32;AF=0.615;AN=52;BaseQRankSum=-9.110;DP=488;FS=23.683;HRun=0;HaplotypeScore=81.2563;InbreedingCoeff=0.6458;MQ=59.63;MQ0=1;MQRankSum=4.043;QD=19.05;ReadPosRankSum=-1.617;VQSLOD=2.6631;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,16:25:39.13:923,39,0	1/1:6,7:14:10.28:161,10,0	./.	0/1:11,0:5:0:0,0,0	1/1:11,15:27:4.14:808,4,0	0/0:7,0:16:13.24:0,13,98	0/1:7,0:17:7.94:14,0,8	1/1:29,0:29:15.45:156,15,0	0/1:7,9:16:19.82:492,0,20	0/0:13,0:13:15.05:0,15,228	0/0:16,0:16:24.07:0,24,354	0/0:5,0:20:12.92:0,13,244	./.	1/1:5,0:8:2.97:20,3,0	1/1:8,12:20:30.10:710,30,0	1/1:2,13:16:30.07:660,30,0	0/0:31,0:31:57.15:0,57,857	1/1:10,10:20:12.04:284,12,0	1/1:10,3:13:9.03:213,9,0	1/1:14,13:27:39.06:711,39,0	1/1:5,6:13:6.02:142,6,0	0/1:3,0:11:1.91:2,0,119	0/0:2,0:11:8.84:0,9,80	1/1:5,0:10:3.44:21,3,0	1/1:12,11:23:18.06:426,18,0	0/0:22,0:22:42.14:0,42,644	1/1:7,13:20:15.05:354,15,0	0/0:21,0:22:33.08:0,33,466
chr10	78816124	.	T	TA	172.58	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-0.110;DP=526;FS=9.533;HRun=0;HaplotypeScore=100.4860;InbreedingCoeff=0.6804;MQ=57.31;MQ0=4;MQRankSum=-0.142;QD=6.64;ReadPosRankSum=-0.879;VQSLOD=2.6490;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,111,1025	0/0:11,0:11:17.94:0,18,135	0/0:11,0:4:8.69:0,9,78	0/1:13,0:7:2.21:2,0,71	0/0:19,0:19:39.46:0,39,277	0/0:19,0:19:46.13:0,46,381	0/0:11,0:11:30.03:0,30,274	0/0:29,0:29:75.19:0,75,566	1/1:0,13:13:24.01:265,24,0	0/0:21,0:20:26.15:0,26,357	0/0:22,0:21:42.92:0,43,289	0/0:18,0:18:48.39:0,48,443	0/0:14,0:14:41.84:0,42,368	0/0:12,0:11:16.72:0,17,140	0/0:30,0:30:63.40:0,63,501	0/0:16,0:16:16.11:0,16,176	0/0:19,0:18:43.81:0,44,441	0/0:28,0:28:49.41:0,49,533	0/0:22,0:22:55.29:0,55,412	0/0:22,0:21:39.69:0,40,282	0/0:8,0:8:14.98:0,15,129	0/0:13,0:13:31.32:0,31,250	0/0:21,0:20:52.07:0,52,561	0/0:24,0:23:61.36:0,61,706	0/0:14,0:14:22.67:0,23,166	0/0:14,0:13:26.50:0,26,194	0/0:24,0:24:40.10:0,40,273	0/0:12,0:12:17.89:0,18,150
chr10	78816316	.	TTAGCCG	T	23565.42	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=7.493;DP=544;FS=0.990;HRun=0;HaplotypeScore=133.3893;InbreedingCoeff=0.9452;MQ=69.21;MQ0=0;MQRankSum=-12.819;QD=50.25;ReadPosRankSum=2.503;VQSLOD=4.8367;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:48.16:1180,48,0	1/1:0,5:5:9.03:221,9,0	0/0:18,0:18:54.18:0,54,1701	0/0:16,0:16:42.14:0,42,1264	1/1:1,25:26:54.15:1275,54,0	1/1:2,19:21:33.07:758,33,0	1/1:3,23:26:60.21:1471,60,0	1/1:2,30:31:87.30:2141,87,0	1/1:2,12:14:30.10:738,30,0	1/1:1,17:18:48.16:1148,48,0	1/1:5,27:32:57.15:1347,57,0	1/1:3,15:18:42.11:958,42,0	1/1:0,14:14:39.13:955,39,0	1/1:1,16:17:33.07:753,33,0	1/1:1,28:29:54.15:1275,54,0	1/1:0,18:18:39.10:902,39,0	0/0:26,0:26:78.27:0,78,2688	0/0:15,0:15:45.11:0,45,1433	1/1:2,11:12:30.10:710,30,0	1/1:1,33:34:69.24:1697,69,0	1/1:2,5:7:12.04:293,12,0	1/1:2,20:22:39.13:959,39,0	1/1:1,16:17:33.11:812,33,0	1/1:2,11:13:17.75:389,18,0	1/1:1,15:16:36.08:832,36,0	1/1:1,25:26:69.22:1646,69,0	1/1:0,18:18:39.13:959,39,0	1/1:3,4:7:6.02:146,6,0
chr10	78817665	.	GCA	G	769.70	PASS	AB=0.866;AC=14;AF=0.250;AN=56;BaseQRankSum=1.560;DP=455;FS=46.469;HRun=0;HaplotypeScore=87.6792;InbreedingCoeff=-0.1709;MQ=69.52;MQ0=3;MQRankSum=2.384;QD=3.95;ReadPosRankSum=3.976;VQSLOD=0.3470;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:74.20:0,74,501	0/0:5,0:5:7.79:0,8,31	0/0:18,0:15:18.44:0,18,214	0/0:11,0:6:8.60:0,9,63	0/1:9,0:11:9.75:10,0,52	0/1:10,1:11:35.18:35,0,104	0/0:33,0:33:52.27:0,52,399	0/0:24,0:24:55.42:0,55,403	0/0:12,0:12:11.13:0,11,78	0/0:8,0:9:17.55:0,18,78	0/0:15,0:16:25.92:0,26,151	0/1:9,7:16:21.28:246,0,21	0/1:8,1:9:48.54:61,0,49	0/1:16,4:20:50.03:175,0,50	0/1:26,0:30:6.11:6,0,195	0/1:14,0:17:12.94:13,0,109	0/0:18,0:18:44.20:0,44,564	0/0:12,0:12:2.65:0,3,105	0/0:14,0:15:30.33:0,30,205	0/0:13,0:13:19.67:0,20,84	0/0:23,0:23:43.14:0,43,204	0/1:11,1:12:20.15:82,0,20	0/1:12,0:12:17.59:53,0,18	0/1:15,3:18:99:119,0,113	0/1:15,0:17:20.30:20,0,118	0/0:13,2:15:7.12:0,7,121	0/1:11,0:14:70.71:71,0,90	1/1:6,1:7:10.95:35,11,0
chr10	78817667	.	ACCC	A	4826.75	PASS	AB=0.690;AC=26;AF=0.464;AN=56;BaseQRankSum=-10.179;DP=462;FS=11.753;HRun=12;HaplotypeScore=85.7638;InbreedingCoeff=0.7837;MQ=69.30;MQ0=3;MQRankSum=-1.762;QD=21.17;ReadPosRankSum=1.892;VQSLOD=2.4793;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:34:37.56:0,38,277	1/1:2,3:5:9.03:114,9,0	0/0:18,0:15:19.15:0,19,185	0/0:13,0:6:6.48:0,6,60	1/1:2,8:10:27.05:323,27,0	0/0:7,0:11:23.75:0,24,197	0/0:12,0:35:63.55:0,64,510	1/1:11,11:22:30.01:363,30,0	0/0:1,0:12:13.20:0,13,95	1/1:0,8:9:21.06:264,21,0	1/1:5,12:17:36.06:454,36,0	0/1:10,1:16:39.05:50,0,39	0/0:4,0:8:5.77:0,6,14	0/0:8,0:20:19.25:0,19,51	1/1:8,23:31:60.62:753,61,0	1/1:6,10:17:16.10:430,16,0	0/0:18,0:19:45.52:0,46,654	0/0:5,0:12:34.15:0,34,264	1/1:5,9:16:32.98:383,33,0	1/1:1,13:14:24.50:302,24,0	1/1:4,20:24:45.08:551,45,0	0/0:3,0:13:9.46:0,9,21	0/0:3,0:13:9.78:0,10,22	0/0:10,0:18:13.39:0,13,30	1/1:8,9:17:33.09:415,33,0	0/1:7,1:15:19.62:27,0,20	1/1:7,8:15:33.09:397,33,0	0/0:1,0:7:6.23:0,6,13
chr10	78818032	.	T	TA	711.91	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.238;DP=651;FS=2.493;HRun=8;HaplotypeScore=65.6798;InbreedingCoeff=0.9684;MQ=81.65;MQ0=0;MQRankSum=-1.431;QD=22.96;ReadPosRankSum=1.480;VQSLOD=4.4829;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1075	0/0:13,0:13:36.02:0,36,329	0/0:22,0:22:34.66:0,35,345	0/0:15,0:15:37.29:0,37,333	0/0:20,0:20:54.02:0,54,494	0/0:33,0:33:91.29:0,91,827	0/0:15,0:15:41.98:0,42,374	0/0:25,1:26:31.33:0,31,523	0/0:23,0:23:63.01:0,63,572	0/0:31,0:31:84.04:0,84,768	0/0:23,1:24:28.40:0,28,506	0/0:19,0:19:54.03:0,54,494	0/0:24,0:24:62.93:0,63,553	0/0:19,0:19:54.01:0,54,490	0/0:30,0:30:84:0,84,758	0/0:20,0:20:51:0,51,462	0/0:22,0:22:53.99:0,54,483	0/0:26,0:26:71.97:0,72,642	0/0:16,0:16:36:0,36,326	0/0:24,0:24:65.95:0,66,594	0/0:30,0:30:78.02:0,78,707	0/0:22,0:22:57.03:0,57,520	0/0:32,0:32:87.01:0,87,787	0/0:22,0:22:54.03:0,54,494	0/0:20,0:20:54.02:0,54,491	1/1:2,25:27:41.72:722,42,0	0/0:31,0:31:80.96:0,81,717	1/1:0,4:4:9.03:104,9,0
chr10	78819246	.	ACCCAGACAGCAAGCAGTCAGTG	A	16722.39	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.944;DP=604;FS=14.043;HRun=0;HaplotypeScore=345.2766;InbreedingCoeff=0.9965;MQ=89.15;MQ0=0;MQRankSum=-15.063;QD=108.59;ReadPosRankSum=4.749;VQSLOD=3.5759;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,10187	0/0:13,0:13:39.13:0,39,3963	0/0:29,0:29:81.28:0,81,5219	0/0:23,0:23:66.19:0,66,4614	0/0:27,0:27:81.27:0,81,7717	1/1:5,10:15:27.09:1654,27,0	1/1:9,8:17:15.05:902,15,0	0/0:36,0:36:99:0,102,9126	0/0:19,0:19:54.19:0,54,4817	0/0:27,0:27:81.27:0,81,7071	0/0:15,0:15:45.15:0,45,4438	1/1:6,15:21:38.90:2389,39,0	1/1:6,13:19:27.09:1651,27,0	1/1:6,18:24:48.16:2941,48,0	0/0:19,0:19:54.19:0,54,4903	0/0:23,0:23:69.24:0,69,6783	0/0:28,0:28:84.29:0,84,7941	0/0:17,0:17:51.18:0,51,5149	0/0:25,0:25:69.24:0,69,5968	0/0:21,0:21:63.22:0,63,5126	0/0:18,0:18:51.16:0,51,3841	1/1:3,20:23:60.21:3498,60,0	1/1:8,14:22:39.60:2316,40,0	1/1:1,12:13:24.08:1371,24,0	0/0:22,0:22:66.22:0,66,5812	0/0:25,0:25:72.25:0,72,6977	0/0:17,0:17:48.16:0,48,4725	0/0:9,0:9:27.09:0,27,2833
chr10	78820299	.	G	GT	528.40	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.629;DP=683;FS=6.752;HRun=8;HaplotypeScore=86.6574;InbreedingCoeff=0.8784;MQ=76.37;MQ0=0;MQRankSum=-0.511;QD=22.97;ReadPosRankSum=0.511;VQSLOD=4.0088;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:59.97:0,60,542	0/0:12,0:12:33.01:0,33,302	0/0:29,0:29:4.79:0,5,374	0/0:19,0:19:22:0,22,251	0/0:26,0:26:72.03:0,72,658	0/0:26,0:26:57.02:0,57,522	0/0:27,0:27:69.01:0,69,626	0/0:27,0:27:66.02:0,66,600	1/1:2,21:23:54.16:623,54,0	0/0:42,0:42:99:0,111,1014	0/0:23,0:23:66.01:0,66,597	0/0:13,0:13:36.02:0,36,330	0/0:20,0:20:51.03:0,51,467	0/0:21,0:21:48.01:0,48,439	0/0:25,0:25:54:0,54,489	0/0:23,0:23:63.03:0,63,577	0/0:24,0:24:63.03:0,63,576	0/0:17,0:17:39.02:0,39,357	0/0:24,0:24:69.04:0,69,631	0/0:20,0:20:54.02:0,54,494	0/0:23,0:23:51.02:0,51,467	0/0:22,0:22:57.02:0,57,521	0/0:31,0:31:65.92:0,66,599	0/0:25,0:25:51:0,51,467	0/0:37,0:37:99:0,102,926	0/0:32,0:32:84.31:0,84,811	0/0:31,0:31:81:0,81,728	0/0:11,0:11:20.98:0,21,192
chr10	78820339	.	A	AT	4293.91	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-10.138;DP=714;FS=6.696;HRun=10;HaplotypeScore=80.4136;InbreedingCoeff=0.9891;MQ=71.00;MQ0=0;MQRankSum=0.501;QD=23.46;ReadPosRankSum=2.581;VQSLOD=5.4242;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:31:55.50:759,56,0	0/0:15,0:15:44.95:0,45,369	0/0:21,0:21:30.38:0,30,243	0/0:19,0:18:10.15:0,10,185	0/0:29,0:29:77.89:0,78,640	0/0:26,1:27:42.93:0,43,559	0/0:25,1:26:33.89:0,34,478	0/0:35,0:35:82.91:0,83,669	0/0:27,0:27:65.81:0,66,533	0/0:35,0:36:71.58:0,72,722	0/0:32,0:32:86.88:0,87,714	1/1:1,13:14:39.10:415,39,0	1/1:5,19:25:32.50:551,32,0	1/1:6,20:26:60.05:611,60,0	0/0:20,0:20:50.91:0,51,416	0/0:24,0:24:56.91:0,57,468	0/0:27,0:27:68.84:0,69,563	0/0:13,0:13:35.94:0,36,293	0/0:22,0:24:51.79:0,52,388	0/0:22,0:22:56.84:0,57,457	0/0:18,1:19:15.95:0,16,337	1/1:4,27:31:53.85:748,54,0	1/1:4,28:32:60.42:640,60,0	1/1:1,22:24:50.19:570,50,0	0/0:35,0:35:88.87:0,89,714	0/0:35,0:35:77.85:0,78,637	0/0:27,0:27:68.89:0,69,562	0/0:17,0:18:49.98:0,50,400
chr10	78820934	.	CTGTGTGTGTGTGTGTGTGTGTGTGTG	C	737.21	PASS	AB=0.899;AC=17;AF=0.340;AN=50;BaseQRankSum=2.572;DP=714;FS=13.708;HRun=0;HaplotypeScore=369.6552;InbreedingCoeff=0.4301;MQ=56.03;MQ0=16;MQRankSum=-0.593;QD=3.14;ReadPosRankSum=-0.758;VQSLOD=0.7577;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:14.94:0,15,884	1/1:7,0:6:1.66:52,2,0	./.	./.	1/1:14,7:20:2.87:16,3,0	0/0:19,0:20:13.60:0,14,614	0/0:30,0:34:27.05:0,27,862	0/0:35,0:35:5.48:0,5,31	0/0:23,0:25:12.51:0,13,431	0/1:19,0:18:14.93:61,0,15	0/1:11,0:10:7.37:7,0,150	0/0:17,0:23:21:0,21,333	0/0:18,0:20:12.46:0,12,213	0/0:14,0:16:12.04:0,12,478	./.	0/1:11,9:20:3.20:431,0,3	0/0:45,0:45:79.27:0,79,4338	0/0:25,0:26:35.61:0,36,1589	1/1:20,0:20:5.27:101,5,0	0/1:21,6:26:8.34:14,0,8	1/1:50,0:46:12.28:83,12,0	0/0:15,0:19:27.08:0,27,598	0/0:19,0:22:12.48:0,12,215	0/0:31,0:31:33.54:0,34,624	1/1:13,12:24:5.93:91,6,0	0/1:22,0:21:7.63:14,0,8	0/0:22,0:21:20.83:0,21,217	1/1:12,0:11:2.75:25,3,0
chr10	78822600	.	A	ATGTGTG	1215.22	PASS	AB=0.971;AC=17;AF=0.327;AN=52;BaseQRankSum=-7.701;DP=702;FS=7.825;HRun=0;HaplotypeScore=252.8945;InbreedingCoeff=0.3049;MQ=62.03;MQ0=8;MQRankSum=7.263;QD=4.02;ReadPosRankSum=-0.110;VQSLOD=1.2186;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:31:70.71:71,0,176	0/0:10,0:10:14.84:0,15,183	./.	./.	0/0:39,0:39:3.37:0,3,42	0/1:26,0:27:77.56:97,0,78	0/1:27,0:26:30.33:30,0,184	1/1:49,0:48:8.63:45,9,0	1/1:13,12:29:17.78:402,18,0	0/0:31,0:30:18.21:0,18,406	0/0:13,0:13:6.02:0,6,84	0/1:18,0:20:28.84:54,0,29	1/1:13,0:16:20.21:138,20,0	0/1:17,0:16:17.31:17,0,35	0/0:33,0:33:24.08:0,24,335	0/0:20,0:20:21.07:0,21,293	0/0:19,0:22:25.72:0,26,398	0/1:11,0:11:32.05:32,0,55	0/0:26,0:25:10.08:0,10,220	0/0:20,0:20:12.04:0,12,167	0/0:31,0:30:0:0,0,0	1/1:17,0:20:29.05:186,29,0	0/1:20,0:21:61.80:62,0,116	1/1:16,0:33:36.80:255,37,0	0/0:32,0:31:36.12:0,36,502	0/0:29,0:29:22.10:0,22,268	0/0:27,0:27:16.55:0,17,214	0/0:19,0:20:9.01:0,9,96
chr10	78822617	.	TGTGTGTGTGTGTGTGTGTGC	T	7866.89	PASS	AB=0.966;AC=15;AF=0.268;AN=56;BaseQRankSum=9.278;DP=653;FS=5.443;HRun=0;HaplotypeScore=336.5149;InbreedingCoeff=0.2553;MQ=51.81;MQ0=11;MQRankSum=-6.741;QD=25.88;ReadPosRankSum=5.077;VQSLOD=2.5488;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:57.18:0,57,2907	1/1:9,0:9:14.99:526,15,0	0/0:24,0:11:23.44:0,23,614	0/0:25,0:10:12.06:0,12,501	0/1:35,4:39:34.07:329,0,34	0/0:28,0:28:57.20:0,57,2591	0/0:29,0:28:55.07:0,55,2244	0/1:41,0:40:99:261,0,326	0/0:29,0:29:35.63:0,36,2090	0/1:28,1:29:20.17:1303,0,20	0/1:13,1:14:12.52:342,0,13	0/0:14,0:14:30.57:0,31,1454	0/0:12,0:12:17.08:0,17,1562	0/0:15,0:14:28.65:0,29,1299	0/1:24,2:26:66.02:937,0,66	1/1:17,1:18:24.08:893,24,0	0/0:18,0:18:45.63:0,46,3364	0/0:9,0:9:27.02:0,27,1252	0/1:19,0:18:49.70:549,0,50	0/1:18,0:18:27.84:407,0,28	0/1:32,0:31:6.93:74,0,7	0/0:23,0:22:41.65:0,42,2521	0/0:24,0:24:57.64:0,58,3052	0/0:29,0:29:37.68:0,38,3424	1/1:32,2:33:39.13:1469,39,0	0/0:27,0:27:66.17:0,66,1594	0/1:23,1:24:0.68:777,0,1	0/0:18,0:18:26.39:0,26,659
chr10	78822619	.	TGTGTGTGTGTGTGTGTGC	T	11494.74	PASS	AB=0.731;AC=23;AF=0.411;AN=56;BaseQRankSum=6.156;DP=648;FS=0.853;HRun=0;HaplotypeScore=301.3276;InbreedingCoeff=0.7690;MQ=52.92;MQ0=11;MQRankSum=-7.102;QD=35.26;ReadPosRankSum=3.281;VQSLOD=3.2378;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:32.14:0,32,2404	1/1:1,8:9:14.99:762,15,0	0/1:26,0:12:3.79:4,0,427	0/0:27,0:12:27.01:0,27,489	1/1:8,31:39:9.81:403,10,0	0/0:28,0:28:57.20:0,57,2101	0/0:31,0:30:55.05:0,55,1906	0/1:16,23:38:6.59:902,0,7	0/0:29,0:29:35.60:0,36,1826	1/1:6,23:28:60.57:2023,61,0	1/1:4,10:14:9.41:413,9,0	0/0:14,0:14:30.56:0,31,1183	0/0:11,0:11:17.08:0,17,1373	0/0:15,0:14:28.65:0,29,1134	0/1:6,20:26:64.57:1149,0,65	1/1:2,15:17:24.08:1188,24,0	0/0:18,0:18:45.13:0,45,2968	0/0:10,0:10:30.02:0,30,1072	1/1:2,18:19:48.93:1028,49,0	1/1:3,15:18:12.93:612,13,0	1/1:6,25:30:5.96:162,6,0	0/0:21,0:20:41.62:0,42,2112	0/0:23,0:23:51.14:0,51,2555	0/0:29,0:29:37.59:0,38,2992	1/1:5,28:32:39.13:1918,39,0	0/0:27,0:27:15.83:0,16,994	1/1:6,19:25:19.26:931,19,0	0/0:15,0:15:14.21:0,14,528
chr10	78822627	.	TGTGTGTGTGC	T	6949.53	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=7.792;DP=627;FS=0.851;HRun=0;HaplotypeScore=245.8079;InbreedingCoeff=0.4826;MQ=52.92;MQ0=11;MQRankSum=-5.712;QD=15.90;ReadPosRankSum=2.413;VQSLOD=3.8159;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:60.05:60,0,868	1/1:8,0:8:14.73:378,15,0	0/1:28,0:13:4.74:5,0,229	0/0:31,0:15:28.18:0,28,290	1/1:37,0:37:12.37:217,12,0	0/0:28,0:28:9.68:0,10,541	0/0:30,0:29:22.73:0,23,434	1/1:31,0:30:33.87:373,34,0	0/0:28,0:28:5.12:0,5,755	1/1:28,0:27:44.55:978,45,0	1/1:12,0:12:8.42:202,8,0	0/0:12,0:12:17.84:0,18,502	0/1:12,0:12:4.87:5,0,604	0/1:14,0:13:2.24:2,0,468	0/1:25,0:25:13.76:577,0,14	1/1:17,0:17:24.08:595,24,0	0/0:20,0:20:50.74:0,51,1634	0/0:11,0:11:29.89:0,30,544	1/1:19,0:18:31.45:502,31,0	1/1:16,0:16:11.61:302,12,0	1/1:29,0:28:5.57:68,6,0	0/1:21,0:20:8.31:8,0,806	0/1:23,0:23:71.33:71,0,930	0/0:29,0:29:8.42:0,8,1323	1/1:32,0:31:39.13:961,39,0	1/1:10,14:24:38.80:836,39,0	1/1:23,0:23:7.36:452,7,0	1/1:12,0:12:20.98:357,21,0
chr10	78822633	.	TGTGC	T	5630.36	PASS	AB=0.949;AC=39;AF=0.696;AN=56;BaseQRankSum=3.998;DP=629;FS=7.307;HRun=0;HaplotypeScore=209.9722;InbreedingCoeff=0.2123;MQ=53.64;MQ0=9;MQRankSum=-3.000;QD=10.48;ReadPosRankSum=1.289;VQSLOD=3.5932;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,1:25:99:276,0,140	1/1:8,0:8:14.91:169,15,0	0/0:30,0:16:21.61:0,22,261	0/0:32,0:18:37.10:0,37,327	1/1:38,0:38:11.91:99,12,0	1/1:23,6:29:29.87:518,30,0	0/1:11,17:27:19.82:335,0,20	1/1:36,0:35:70.88:579,71,0	0/1:27,0:27:62.39:62,0,153	1/1:29,0:28:54.03:544,54,0	1/1:14,0:14:11.62:109,12,0	0/1:11,0:11:48.84:49,0,108	0/1:13,0:13:67.96:68,0,105	0/1:13,0:12:33.98:34,0,102	1/1:25,0:25:24.07:269,24,0	1/1:18,0:18:27.05:285,27,0	0/0:19,0:19:23.97:0,24,813	0/0:11,0:11:29.58:0,30,291	1/1:18,0:18:43.62:349,44,0	1/1:16,0:16:11.59:135,12,0	1/1:29,0:28:5.64:35,6,0	0/1:21,0:20:92.55:141,0,93	0/1:24,1:25:99:232,0,186	0/1:32,0:32:99:102,0,230	1/1:32,0:31:39.06:423,39,0	1/1:17,0:17:41.05:406,41,0	1/1:23,0:23:20.52:218,21,0	1/1:10,0:10:23.86:194,24,0
chr10	78822680	.	CAGAG	C	1819.43	PASS	AB=0.955;AC=20;AF=0.385;AN=52;BaseQRankSum=1.195;DP=564;FS=8.383;HRun=0;HaplotypeScore=164.5840;InbreedingCoeff=0.6683;MQ=65.44;MQ0=8;MQRankSum=1.062;QD=9.01;ReadPosRankSum=-0.181;VQSLOD=2.5325;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:25:13.29:0,13,222	1/1:7,0:6:3:28,3,0	./.	./.	1/1:16,5:22:5.88:93,6,0	1/1:19,5:24:28.28:364,28,0	1/1:9,1:10:6.01:75,6,0	0/0:31,0:31:0:0,0,0	0/0:16,0:19:21.07:0,21,353	1/1:10,5:16:18.05:261,18,0	1/1:10,4:14:8.71:119,9,0	0/1:11,1:20:25.61:26,0,294	0/0:6,0:13:15.05:0,15,252	0/0:7,0:7:2.47:0,2,70	1/1:16,6:22:24.07:355,24,0	1/1:10,8:20:32.47:456,32,0	0/0:13,1:14:21.07:0,21,426	0/0:12,0:17:21.52:0,22,322	0/0:18,0:18:15.05:0,15,247	0/1:22,1:23:24.35:24,0,259	0/0:26,0:26:23.09:0,23,471	0/0:19,0:19:21.07:0,21,426	0/0:18,0:25:5.98:0,6,72	0/0:14,0:16:21.07:0,21,371	1/1:16,4:21:14.97:204,15,0	0/0:17,0:17:28.85:0,29,448	0/0:25,0:24:32.78:0,33,714	0/0:5,0:7:6.02:0,6,105
chr10	78824523	.	G	GGACT	19054.32	PASS	AB=0.944;AC=25;AF=0.446;AN=56;BaseQRankSum=-15.866;DP=766;FS=5.280;HRun=0;HaplotypeScore=119.7765;InbreedingCoeff=0.9250;MQ=81.24;MQ0=0;MQRankSum=-6.961;QD=54.29;ReadPosRankSum=0.796;VQSLOD=6.1631;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,154,2775	1/1:3,8:11:18.06:475,18,0	0/0:18,0:18:39.13:0,39,639	0/0:28,0:28:55.40:0,55,974	1/1:3,16:19:36.12:950,36,0	0/0:22,0:22:63.22:0,63,1158	0/0:31,0:31:78.24:0,78,1375	1/1:10,21:37:90.28:2141,90,0	0/0:30,0:30:90.29:0,90,1609	1/1:7,34:43:99:2924,114,0	1/1:3,9:12:27.09:712,27,0	0/0:33,0:33:96.32:0,96,1717	0/0:36,0:36:99:0,102,1846	0/0:32,0:32:96.26:0,96,1670	1/1:3,26:30:78.27:2053,78,0	1/1:7,26:35:23.06:1923,23,0	0/0:28,0:28:81.28:0,81,1471	0/0:27,0:27:75.26:0,75,1378	1/1:14,10:24:42.10:1034,42,0	1/1:3,19:22:57.20:1479,57,0	1/1:6,38:45:99:2680,102,0	0/0:22,0:22:63.20:0,63,1118	0/0:17,0:17:51.17:0,51,939	0/0:31,0:31:84.27:0,84,1506	1/1:1,17:18:48.16:1265,48,0	0/1:32,2:34:71.24:71,0,1403	1/1:3,16:21:51.18:1346,51,0	0/0:6,0:6:18.06:0,18,331
chr10	78826771	.	GC	G	12918.17	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=16.521;DP=654;FS=10.238;HRun=5;HaplotypeScore=214.6597;InbreedingCoeff=0.9911;MQ=85.12;MQ0=0;MQRankSum=-13.981;QD=26.36;ReadPosRankSum=2.563;VQSLOD=2.0619;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,31:35:63.18:714,63,0	1/1:1,4:5:12.03:136,12,0	0/0:28,0:28:80.23:0,80,987	0/0:28,1:29:63.19:0,63,797	1/1:4,24:28:54.15:612,54,0	0/0:22,0:21:54.18:0,54,737	0/0:20,0:20:57.19:0,57,780	1/1:7,25:32:78.21:877,78,0	0/0:14,0:14:33.10:0,33,435	1/1:4,22:26:72.20:809,72,0	1/1:3,15:18:36.10:407,36,0	1/1:2,20:22:60.17:680,60,0	1/1:4,14:18:42.12:476,42,0	1/1:3,21:24:69.20:781,69,0	1/1:4,28:32:93.23:1031,93,0	1/1:3,17:20:57.13:625,57,0	0/0:29,0:29:78.26:0,78,1067	0/0:22,0:22:63.21:0,63,860	1/1:1,19:20:57.16:646,57,0	1/1:2,25:27:57.16:645,57,0	1/1:2,27:29:27:306,27,0	1/1:1,23:24:54.15:612,54,0	1/1:2,25:27:63.18:714,63,0	1/1:4,14:18:27.08:306,27,0	1/1:0,17:17:42.12:476,42,0	1/1:8,27:35:87.24:978,87,0	1/1:1,27:28:81.23:917,81,0	1/1:0,5:5:15.04:170,15,0
chr10	78826796	.	AT	A	15170.57	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=16.755;DP=691;FS=0.682;HRun=3;HaplotypeScore=224.7044;InbreedingCoeff=0.9956;MQ=80.55;MQ0=0;MQRankSum=-14.029;QD=29.23;ReadPosRankSum=1.870;VQSLOD=3.8709;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,39:41:93.29:1132,93,0	1/1:0,6:6:15.05:185,15,0	0/0:27,0:27:81.26:0,81,1133	0/0:23,0:23:57.85:0,58,827	1/1:4,29:33:54.15:655,54,0	0/0:23,0:22:69.23:0,69,987	0/0:26,0:26:75.25:0,75,1078	1/1:4,31:35:93.29:1152,93,0	0/0:15,0:15:45.15:0,45,648	1/1:1,19:20:57.18:700,57,0	1/1:2,17:19:39.12:482,39,0	1/1:2,20:22:63.16:763,63,0	1/1:2,20:22:60.17:724,60,0	1/1:1,21:22:63.20:779,63,0	1/1:2,27:29:84.23:1023,84,0	1/1:0,16:16:48.15:594,48,0	0/0:31,0:31:90.28:0,90,1273	0/0:27,0:27:81.22:0,81,1124	1/1:6,14:20:48.14:581,48,0	1/1:1,26:27:66.20:813,66,0	1/1:4,31:35:44.98:529,45,0	1/1:2,26:28:75.23:923,75,0	1/1:1,23:24:54.17:667,54,0	1/1:1,22:23:39.12:476,39,0	1/1:2,17:19:45.14:557,45,0	1/1:5,31:36:93.22:1119,93,0	1/1:1,34:35:90.28:1107,90,0	1/1:1,6:7:18.04:209,18,0
chr10	78827315	.	T	TCTCCTCCTC	7946.82	PASS	AB=0.821;AC=32;AF=0.593;AN=54;BaseQRankSum=0.263;DP=462;FS=12.659;HRun=0;HaplotypeScore=130.8746;InbreedingCoeff=0.2051;MQ=68.10;MQ0=5;MQRankSum=-6.771;QD=25.55;ReadPosRankSum=-2.444;VQSLOD=3.2854;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:11:11.98:194,12,0	0/0:4,0:4:3:0,3,25	0/0:24,0:10:12.02:0,12,295	0/0:36,0:32:35.14:0,35,751	0/1:18,0:23:74.43:74,0,143	1/1:13,28:46:61.09:2666,61,0	1/1:14,13:32:27.09:1207,27,0	0/1:15,0:17:16.56:416,0,17	1/1:4,0:16:9.03:256,9,0	0/1:9,0:16:72.44:164,0,72	1/1:3,0:5:3.36:95,3,0	1/1:14,0:19:18.06:415,18,0	1/1:8,0:10:3.01:54,3,0	1/1:2,0:6:18.06:462,18,0	0/1:8,0:15:52.72:174,0,53	1/1:10,0:13:12.04:291,12,0	0/0:25,0:25:45.11:0,45,1066	0/0:18,0:18:48.16:0,48,1328	0/1:13,0:19:9.25:604,0,9	0/0:4,0:8:12:0,12,182	./.	0/1:10,0:13:99:284,0,128	1/1:6,0:11:1.10:81,1,0	0/0:18,0:21:2.69:0,3,8	0/1:4,0:7:53.86:183,0,54	0/1:11,0:12:95.72:96,0,154	1/1:11,0:11:6.02:183,6,0	1/1:6,0:6:4.26:47,4,0
chr10	78827331	.	C	CTCT	634.10	PASS	AB=0.974;AC=13;AF=0.232;AN=56;BaseQRankSum=7.694;DP=465;FS=9.029;HRun=0;HaplotypeScore=94.1781;InbreedingCoeff=-0.2653;MQ=65.69;MQ0=5;MQRankSum=-5.102;QD=2.88;ReadPosRankSum=4.007;VQSLOD=1.0116;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:18.54:0,19,132	0/0:3,0:3:8.99:0,9,89	0/0:25,0:9:27.01:0,27,353	0/0:37,0:33:51.32:0,51,739	0/0:19,0:19:30.20:0,30,254	0/1:48,0:48:99:275,0,136	0/1:28,0:28:99:102,0,119	0/1:21,0:20:4.15:4,0,236	0/1:11,0:11:19.10:19,0,62	0/0:14,0:14:5.58:0,6,158	0/0:9,0:9:23.47:0,23,192	0/1:21,0:21:52.12:52,0,242	0/1:11,0:10:4.18:4,0,87	0/1:12,0:12:2.83:3,0,105	0/1:15,0:14:8.62:9,0,60	0/1:10,0:10:35.04:35,0,52	0/0:22,0:22:63.06:0,63,879	0/0:23,0:23:66.13:0,66,964	0/0:19,0:19:20.53:0,21,290	0/0:12,0:12:18.93:0,19,171	0/0:13,0:13:26.94:0,27,223	0/1:12,0:12:31.77:32,0,131	0/0:11,0:11:8.56:0,9,56	0/0:18,0:18:26.39:0,26,189	0/0:9,0:9:12.92:0,13,111	0/1:8,6:16:99:186,0,100	0/1:8,0:8:4.88:5,0,74	0/1:7,0:7:10.27:50,0,10
chr10	78827694	.	ATGGAC	A	5313.14	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.071;DP=685;FS=0.877;HRun=0;HaplotypeScore=153.9298;InbreedingCoeff=0.9991;MQ=56.14;MQ0=14;MQRankSum=-14.198;QD=43.20;ReadPosRankSum=0.959;VQSLOD=5.0977;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,99,3012	0/0:9,0:8:24.08:0,24,741	0/0:17,0:14:39.09:0,39,975	0/0:21,0:15:36.12:0,36,948	0/0:26,0:26:57.18:0,57,1618	0/0:32,0:32:93.31:0,93,2833	0/0:31,0:27:75.20:0,75,2186	0/0:28,0:24:69.21:0,69,1959	0/0:19,0:19:54.19:0,54,1688	0/0:32,0:30:87.29:0,87,2556	0/0:22,0:22:57.20:0,57,1765	1/1:2,30:32:75.13:1488,75,0	1/1:1,17:16:39.13:844,39,0	1/1:1,18:19:39.13:844,39,0	0/0:40,0:40:99:0,108,3314	0/0:35,0:35:90.31:0,90,2806	0/0:18,0:18:54.19:0,54,1642	0/0:29,0:28:81.28:0,81,2474	0/0:18,0:13:39.12:0,39,1131	0/0:22,0:22:63.20:0,63,1918	0/0:36,0:36:96.31:0,96,2820	1/1:1,20:20:47.97:899,48,0	1/1:1,12:13:33.11:712,33,0	1/1:0,20:20:29.93:525,30,0	0/0:21,0:19:48.13:0,48,1326	0/0:23,0:23:66.23:0,66,2068	0/0:34,0:34:96.32:0,96,2932	0/0:9,0:9:27.09:0,27,855
chr10	78828437	.	T	TA	3977.29	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=13.181;DP=404;FS=22.952;HRun=8;HaplotypeScore=129.0435;InbreedingCoeff=0.8043;MQ=57.76;MQ0=0;MQRankSum=-12.029;QD=13.26;ReadPosRankSum=0.342;VQSLOD=1.7334;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,1:17:32.59:191,33,0	1/1:4,0:4:2.92:17,3,0	0/0:6,0:6:5.30:0,5,47	0/1:6,0:6:6.91:7,0,44	1/1:25,0:25:51.56:301,52,0	0/0:19,0:19:51.03:0,51,466	0/0:19,0:19:51.03:0,51,467	1/1:25,0:25:59.54:497,60,0	0/0:10,0:10:27.01:0,27,247	1/1:12,1:14:29.52:205,30,0	1/1:12,0:12:25.68:153,26,0	1/1:16,0:16:28.09:161,28,0	1/1:16,0:16:38.85:227,39,0	1/1:12,0:12:17.55:104,18,0	1/1:14,0:14:32.17:192,32,0	1/1:19,0:19:46.79:279,47,0	0/0:26,0:26:60.01:0,60,545	0/0:24,0:24:55.83:0,56,499	1/1:12,0:12:29.34:193,29,0	1/1:22,0:22:49.76:299,50,0	1/1:8,0:8:10.13:55,10,0	1/1:15,0:15:37.82:222,38,0	1/1:10,0:10:20.54:130,21,0	1/1:2,0:2:2.92:17,3,0	1/1:16,0:16:41.83:246,42,0	1/1:17,0:17:35.25:235,35,0	1/1:15,0:15:29.24:175,29,0	1/1:0,3:3:6.02:69,6,0
chr10	78828445	.	A	AACTACT	25182.37	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=10.830;DP=438;FS=25.486;HRun=0;HaplotypeScore=100.5149;InbreedingCoeff=0.9127;MQ=64.42;MQ0=0;MQRankSum=-12.662;QD=76.78;ReadPosRankSum=0.981;VQSLOD=3.5557;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:19:36.12:1281,36,0	1/1:0,1:3:3.01:108,3,0	0/0:10,0:10:12.08:0,12,395	0/0:8,0:8:9.37:0,9,195	1/1:0,21:24:54.14:1818,54,0	0/0:18,0:18:54.15:0,54,1158	0/0:17,0:17:51.18:0,51,1222	1/1:7,8:30:84.24:2383,84,0	0/0:11,0:11:33.10:0,33,716	1/1:5,9:17:50.96:1434,51,0	1/1:0,9:10:27.09:955,27,0	1/1:2,13:18:36.12:1243,36,0	1/1:0,16:17:42.14:1500,42,0	1/1:1,6:10:18.06:650,18,0	1/1:3,11:16:39.13:1352,39,0	1/1:1,19:22:48.16:1736,48,0	0/0:21,0:21:60.21:0,60,1416	0/0:25,0:25:62.03:0,62,1515	1/1:2,8:14:39.12:1221,39,0	1/1:2,17:21:54.14:1825,54,0	1/1:2,6:12:15.52:501,16,0	1/1:3,15:20:48.16:1638,48,0	1/1:3,8:13:30.10:988,30,0	1/1:1,4:5:6.02:190,6,0	1/1:0,15:17:45.15:1610,45,0	1/1:2,14:20:45.15:1447,45,0	1/1:2,12:18:33.11:1176,33,0	1/1:2,0:2:6.02:129,6,0
chr10	78829216	.	CATAT	C	927.24	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.799;DP=466;FS=0.000;HRun=0;HaplotypeScore=85.3779;InbreedingCoeff=0.7663;MQ=62.36;MQ0=15;MQRankSum=-0.170;QD=22.08;ReadPosRankSum=1.979;VQSLOD=3.3539;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:12:30.06:0,30,500	0/0:7,0:7:21.07:0,21,517	0/0:27,0:10:14.12:0,14,141	0/0:58,0:15:12.65:0,13,76	0/0:22,0:22:48.16:0,48,1203	1/1:3,26:29:48.16:835,48,0	1/1:2,11:13:12.04:208,12,0	0/0:35,0:35:72.22:0,72,1622	0/0:2,0:8:5.60:0,6,25	0/0:18,0:18:36.09:0,36,837	0/0:22,0:23:53.97:0,54,1243	0/0:3,0:4:11.83:0,12,234	0/0:11,0:10:29.13:0,29,662	0/0:10,0:10:21.05:0,21,477	0/0:15,0:15:33.10:0,33,778	0/0:7,0:8:20.86:0,21,470	0/0:26,0:26:69.22:0,69,1619	0/0:22,0:22:60.21:0,60,1514	0/0:10,0:10:24.08:0,24,561	0/0:15,0:15:39.12:0,39,921	0/0:9,0:9:24.08:0,24,597	0/0:1,0:1:3.01:0,3,76	0/0:7,0:8:12.04:0,12,272	0/0:3,0:3:6:0,6,100	0/0:13,0:15:35.90:0,36,800	0/0:18,0:20:43.80:0,44,692	0/0:13,0:16:41.51:0,42,876	0/0:19,0:21:45.03:0,45,672
chr10	78829237	.	G	GTATA	699.81	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=-0.392;DP=424;FS=0.000;HRun=0;HaplotypeScore=81.8965;InbreedingCoeff=0.6584;MQ=62.98;MQ0=16;MQRankSum=-0.385;QD=9.46;ReadPosRankSum=-0.178;VQSLOD=2.3007;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:30.08:0,30,480	0/0:8,0:8:15.05:0,15,254	0/1:24,0:10:0:0,0,0	0/0:52,0:10:0.61:0,1,53	0/0:20,0:22:51.10:0,51,782	0/0:31,0:31:60.07:0,60,978	0/0:10,0:10:18.04:0,18,277	0/0:30,0:32:72.20:0,72,1101	0/0:6,0:6:6.02:0,6,102	0/0:14,0:14:36.12:0,36,587	0/0:19,0:20:42.07:0,42,607	1/1:1,2:3:6.02:150,6,0	1/1:5,6:10:6.02:149,6,0	1/1:2,5:7:9.03:225,9,0	0/0:8,0:9:24.08:0,24,384	0/0:10,0:10:24.08:0,24,407	0/0:25,0:25:60.15:0,60,944	0/0:22,0:22:45.12:0,45,725	0/0:12,0:12:24.08:0,24,407	0/0:13,0:13:13.72:0,14,394	0/0:10,0:10:27.06:0,27,404	1/1:0,2:2:3.01:75,3,0	1/1:1,4:5:6.02:150,6,0	1/1:2,0:2:6:92,6,0	0/0:13,0:13:24.08:0,24,407	0/1:17,0:20:14.61:15,0,284	0/0:14,0:14:33.06:0,33,480	0/0:13,0:15:5.58:0,6,151
chr10	78830068	.	CAT	C	2038.03	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=4.970;DP=484;FS=18.681;HRun=0;HaplotypeScore=120.1899;InbreedingCoeff=0.7954;MQ=45.15;MQ0=22;MQRankSum=-5.312;QD=6.66;ReadPosRankSum=-3.084;VQSLOD=1.5091;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:23:7.75:68,8,0	1/1:2,0:2:2.99:24,3,0	0/0:34,0:10:30.06:0,30,335	0/0:29,0:12:19.38:0,19,329	1/1:6,3:9:8.92:63,9,0	0/0:20,0:20:45.08:0,45,719	0/0:29,0:28:54.58:0,55,965	1/1:14,0:13:30.13:198,30,0	0/0:16,0:16:27.06:0,27,445	1/1:9,2:9:26.72:199,27,0	1/1:7,4:10:8.83:71,9,0	1/1:18,1:19:9.32:67,9,0	1/1:9,0:9:8.73:60,9,0	1/1:18,0:18:11.31:75,11,0	1/1:9,4:13:11.88:84,12,0	1/1:13,4:17:29.28:227,29,0	0/0:34,0:33:87.04:0,87,1394	0/0:16,0:16:33.40:0,33,469	1/1:15,5:19:48.26:350,48,0	1/1:7,4:10:5.68:38,6,0	1/1:33,1:33:5.99:48,6,0	1/1:8,0:8:8.98:73,9,0	1/1:7,0:7:2.97:20,3,0	1/1:20,0:18:5.98:47,6,0	1/1:11,11:22:23.85:218,24,0	1/1:6,0:6:17.12:92,17,0	1/1:8,5:13:26.48:180,26,0	1/1:17,1:18:5.88:33,6,0
chr10	78830070	.	T	TGCGTGCGTGC	1772.56	PASS	AB=1.000;AC=36;AF=0.667;AN=54;BaseQRankSum=6.224;DP=504;FS=11.451;HRun=0;HaplotypeScore=176.0354;InbreedingCoeff=0.4582;MQ=43.12;MQ0=22;MQRankSum=-3.995;QD=5.68;ReadPosRankSum=-2.128;VQSLOD=1.6898;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:23:0.92:2,1,0	./.	0/0:34,0:10:23.12:0,23,474	0/0:29,0:12:29.93:0,30,589	1/1:10,0:10:5.75:60,6,0	0/0:23,0:23:42.01:0,42,1172	0/0:33,0:32:55.88:0,56,1447	0/1:12,0:11:14.12:104,0,14	0/0:19,0:19:22.36:0,22,730	0/1:10,0:8:17.99:101,0,18	1/1:12,0:11:4.08:46,4,0	1/1:21,0:21:9.89:125,10,0	1/1:9,0:8:3.01:31,3,0	1/1:20,0:20:14.85:179,15,0	1/1:12,0:12:8.93:99,9,0	0/1:15,0:15:24.28:125,0,24	0/0:36,0:35:78.20:0,78,2157	0/0:17,0:17:21.22:0,21,681	0/1:18,0:17:9.98:200,0,10	1/1:14,0:12:6.02:91,6,0	1/1:34,0:32:2.86:20,3,0	1/1:6,0:6:2.70:19,3,0	1/1:8,0:8:3.01:56,3,0	1/1:21,0:19:6.88:42,7,0	1/1:25,0:25:8.32:130,8,0	1/1:8,0:8:17.53:250,18,0	1/1:14,0:14:8.35:76,8,0	1/1:3,13:19:10.38:196,10,0
chr10	78830079	.	GTGTGTA	G	1534.73	PASS	AB=0.988;AC=31;AF=0.596;AN=52;BaseQRankSum=6.599;DP=472;FS=2.094;HRun=0;HaplotypeScore=142.4510;InbreedingCoeff=0.4739;MQ=38.58;MQ0=23;MQRankSum=-6.637;QD=5.64;ReadPosRankSum=-1.825;VQSLOD=2.1257;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:2.13:0,2,5	0/0:3,0:3:0.89:0,1,2	0/0:26,0:3:5.72:0,6,29	0/0:21,0:4:2.17:0,2,49	1/1:8,0:7:2.99:24,3,0	0/0:23,0:23:32.09:0,32,644	0/0:33,0:32:45.33:0,45,717	1/1:15,0:13:25.91:162,26,0	0/0:19,0:19:20.98:0,21,243	1/1:11,0:9:22.38:234,22,0	1/1:12,0:11:2.99:24,3,0	1/1:27,0:27:14.73:102,15,0	1/1:9,0:8:2.80:13,3,0	0/1:18,0:18:7.14:7,0,28	1/1:13,1:14:2.31:22,2,0	1/1:14,0:14:12.01:164,12,0	0/0:33,0:32:40.85:0,41,965	0/1:20,0:20:0.90:1,0,233	1/1:14,2:15:35.20:375,35,0	0/1:15,1:14:0:0,0,1	1/1:30,0:28:0.13:0,0,0	1/1:6,0:6:0.47:1,0,0	./.	./.	1/1:22,0:22:17.92:281,18,0	0/1:6,0:6:2.15:48,0,2	1/1:12,0:12:20.84:219,21,0	0/1:16,0:16:14.08:14,0,28
chr10	78830081	.	GTGTA	G	1346.31	PASS	AB=1.000;AC=28;AF=0.538;AN=52;BaseQRankSum=6.990;DP=462;FS=2.950;HRun=0;HaplotypeScore=132.9608;InbreedingCoeff=0.5735;MQ=38.20;MQ0=24;MQRankSum=-6.248;QD=5.88;ReadPosRankSum=-1.531;VQSLOD=1.9198;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:1.77:0,2,4	0/0:3,0:3:0.47:0,0,1	0/0:25,0:3:5.72:0,6,29	0/0:19,0:3:2.17:0,2,49	1/1:7,1:7:2.99:24,3,0	0/0:22,0:22:32.16:0,32,499	0/0:32,0:32:45.47:0,45,568	1/1:15,0:13:26.50:174,27,0	0/0:19,0:19:20.98:0,21,219	1/1:9,1:8:22.40:202,22,0	1/1:10,1:10:2.86:24,3,0	1/1:25,0:25:19.58:127,20,0	1/1:9,0:8:2.80:13,3,0	0/1:19,0:18:7.20:7,0,12	1/1:13,1:14:2.48:22,2,0	1/1:11,3:14:12:125,12,0	0/0:33,0:31:40.60:0,41,800	0/0:22,0:22:22.31:0,22,208	1/1:15,1:15:35.31:305,35,0	0/0:16,0:14:0.47:0,0,1	0/1:27,0:25:0.34:0,0,0	0/1:6,0:6:0:0,0,0	./.	./.	1/1:18,3:21:17.92:213,18,0	1/1:6,0:6:8.83:60,9,0	1/1:9,3:12:20.70:175,21,0	0/1:16,0:16:5.14:38,0,5
chr10	78830083	.	GTA	G	1244.69	PASS	AB=1.000;AC=30;AF=0.577;AN=52;BaseQRankSum=7.672;DP=458;FS=3.874;HRun=0;HaplotypeScore=122.5140;InbreedingCoeff=0.6624;MQ=37.92;MQ0=24;MQRankSum=-7.277;QD=5.39;ReadPosRankSum=-1.179;VQSLOD=2.8812;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:0.94:0,1,2	0/0:4,0:4:0.47:0,0,1	0/0:23,0:2:5.72:0,6,29	0/0:19,0:3:2.17:0,2,49	1/1:7,1:7:2.99:24,3,0	0/0:22,0:22:32.09:0,32,355	0/0:32,0:31:45.46:0,45,461	1/1:14,0:12:26.50:174,27,0	0/0:19,0:19:20.98:0,21,195	1/1:10,1:9:22.38:169,22,0	1/1:11,0:10:2.86:24,3,0	1/1:25,0:25:21.42:140,21,0	1/1:8,0:7:2.80:13,3,0	1/1:16,0:15:2.30:12,2,0	1/1:12,2:14:2.82:23,3,0	1/1:16,0:16:11.99:105,12,0	0/0:33,0:31:30.76:0,31,597	0/0:22,0:22:17.46:0,17,201	1/1:15,0:14:38.53:283,39,0	0/0:16,0:14:0.47:0,0,1	0/1:29,0:27:0:0,0,0	0/1:6,0:6:0:0,0,0	./.	./.	1/1:19,4:22:17.89:165,18,0	1/1:6,0:6:11.84:77,12,0	1/1:12,1:13:20.60:145,21,0	1/1:16,0:16:11.38:54,11,0
chr10	78830085	.	A	ATGTG	412.86	PASS	AB=0.952;AC=22;AF=0.524;AN=42;BaseQRankSum=-1.937;DP=468;FS=9.057;HRun=0;HaplotypeScore=144.9243;InbreedingCoeff=0.2992;MQ=37.61;MQ0=23;MQRankSum=0.264;QD=1.76;ReadPosRankSum=-2.807;VQSLOD=1.2953;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:17:0.94:3,1,0	1/1:4,0:4:0.47:1,0,0	./.	./.	./.	1/1:24,0:24:15.85:171,16,0	1/1:32,0:31:12.35:190,12,0	1/1:13,0:11:0.36:1,0,0	./.	0/1:14,0:12:1.30:1,0,23	0/0:11,0:11:0.36:0,0,1	1/1:26,0:26:5.75:27,6,0	./.	0/1:16,0:15:0.01:0,0,0	0/1:14,0:14:0:0,0,0	0/0:15,0:15:3:0,3,27	0/0:33,0:31:12.79:0,13,184	0/1:13,9:22:36.17:64,0,36	0/1:15,0:14:7.59:8,0,71	0/0:19,0:17:0.34:0,0,1	0/0:25,0:23:0.20:0,0,1	0/0:6,0:6:0.47:0,0,1	./.	./.	0/0:24,0:23:11.70:0,12,77	1/1:7,0:7:2.51:7,3,0	0/1:13,0:13:3.24:3,0,21	1/1:16,0:16:6.78:48,7,0
chr10	78830117	.	GTGTATATATATATA	G	2460.77	PASS	AB=1.000;AC=24;AF=0.480;AN=50;BaseQRankSum=4.705;DP=388;FS=1.617;HRun=0;HaplotypeScore=146.1651;InbreedingCoeff=0.3117;MQ=37.86;MQ0=10;MQRankSum=-4.409;QD=11.55;ReadPosRankSum=1.909;VQSLOD=2.7596;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:12:0,12,164	1/1:7,0:7:2.67:103,3,0	./.	./.	./.	0/1:22,0:22:61.04:61,0,214	0/1:26,0:26:69.36:69,0,137	0/1:16,0:11:16.14:301,0,16	0/0:11,0:11:2.99:0,3,24	1/1:12,1:13:28.63:814,29,0	1/1:11,0:11:0.20:1,0,0	0/0:20,0:20:14.27:0,14,138	1/1:3,0:2:3:29,3,0	0/1:14,0:13:11.01:11,0,12	0/0:13,1:14:0.47:0,0,1	1/1:12,0:12:5.89:116,6,0	0/0:25,0:23:54.22:0,54,2453	0/0:19,0:19:24.55:0,25,728	1/1:20,0:19:22.44:521,22,0	0/1:20,0:18:0:0,0,1	0/0:21,0:21:0.94:0,1,1	1/1:7,0:7:0.47:1,0,0	0/0:9,0:9:5.49:0,5,23	0/0:11,0:9:2.74:0,3,12	1/1:21,1:21:14.63:289,15,0	0/1:10,0:10:72.38:72,0,229	1/1:9,1:10:7.26:222,7,0	0/0:14,0:13:20.54:0,21,319
chr10	78830119	.	GTATATATATATA	G	2386.90	PASS	AB=0.659;AC=22;AF=0.458;AN=48;BaseQRankSum=1.885;DP=380;FS=1.805;HRun=0;HaplotypeScore=140.5600;InbreedingCoeff=0.4003;MQ=40.70;MQ0=7;MQRankSum=-4.587;QD=12.63;ReadPosRankSum=0.893;VQSLOD=2.7973;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:12:0,12,163	1/1:1,6:7:3.01:104,3,0	./.	0/0:2,0:2:3.01:0,3,54	./.	0/1:11,7:22:67.13:67,0,71	0/1:16,7:25:24.47:117,0,24	1/1:11,5:12:6.42:335,6,0	./.	1/1:4,7:13:26.79:808,27,0	1/1:5,5:10:0.34:1,0,0	0/0:18,0:20:19.29:0,19,235	1/1:3,0:2:3:29,3,0	0/0:12,0:11:2.44:0,2,16	0/0:7,7:14:0.47:0,0,1	1/1:7,5:12:3.01:101,3,0	0/0:25,0:23:48.64:0,49,2234	0/0:19,0:19:24.08:0,24,689	1/1:12,8:19:18.42:465,18,0	0/1:9,10:19:0:0,0,0	0/0:11,10:21:0.94:0,1,1	./.	0/0:7,0:9:5.49:0,5,23	0/0:6,0:7:2.74:0,3,12	1/1:9,12:21:8.70:233,9,0	0/1:3,0:10:70.35:70,0,222	1/1:5,4:10:6.02:206,6,0	0/0:12,0:12:17.02:0,17,246
chr10	78830373	.	G	GA	813.02	PASS	AB=0.888;AC=17;AF=0.304;AN=56;BaseQRankSum=-3.271;DP=593;FS=1.719;HRun=15;HaplotypeScore=113.1160;InbreedingCoeff=-0.0541;MQ=77.80;MQ0=0;MQRankSum=0.310;QD=2.38;ReadPosRankSum=-3.446;VQSLOD=-0.3126;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,20:32:23.71:287,24,0	0/1:7,1:10:25.14:25,0,47	0/0:36,1:27:25.62:0,26,170	0/0:20,0:17:7.56:0,8,60	0/0:16,0:17:34.33:0,34,203	0/0:4,0:27:44.79:0,45,128	0/0:5,0:18:24.39:0,24,70	0/1:32,0:35:35.40:35,0,72	0/1:5,9:16:1.87:75,0,2	0/1:24,1:25:3.82:4,0,180	0/1:19,2:26:8.73:9,0,152	0/1:16,0:16:27.95:28,0,54	0/0:20,0:20:3.55:0,4,121	0/1:14,2:18:26.16:26,0,74	0/0:18,0:22:15.18:0,15,175	0/1:25,3:31:78.56:79,0,199	0/1:20,2:25:10.56:11,0,209	0/0:15,1:16:15.41:0,15,102	0/1:17,1:19:2.83:3,0,91	0/1:22,5:27:54.61:55,0,141	0/0:19,2:23:2.96:0,3,124	0/0:6,0:7:7.82:0,8,42	0/0:7,0:7:11.73:0,12,72	0/0:16,1:20:4.02:0,4,113	0/1:16,0:16:18.50:19,0,83	1/1:10,15:28:23.40:256,23,0	0/0:18,0:18:35.05:0,35,215	0/1:9,8:17:6.03:64,0,6
chr10	78831745	.	C	CCAATCAAT	656.75	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.430;DP=698;FS=6.278;HRun=0;HaplotypeScore=166.6277;InbreedingCoeff=0.9599;MQ=70.73;MQ0=0;MQRankSum=-3.564;QD=29.85;ReadPosRankSum=-0.838;VQSLOD=2.8796;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:66.10:0,66,1362	0/0:5,0:5:12.03:0,12,256	0/0:27,0:25:39.04:0,39,692	0/0:34,0:32:48.13:0,48,962	0/0:36,0:36:78.16:0,78,1585	0/0:27,0:27:57.12:0,57,1301	0/0:19,0:19:33.09:0,33,747	0/0:23,0:23:39.09:0,39,681	1/1:9,13:22:18.06:747,18,0	0/0:35,0:35:84.26:0,84,1985	0/0:16,0:16:33.10:0,33,767	0/0:19,0:19:51.13:0,51,1200	0/0:27,0:27:54.17:0,54,1332	0/0:23,0:23:60.15:0,60,1333	0/0:23,0:23:57.06:0,57,1042	0/0:41,0:41:81.24:0,81,1835	0/0:18,0:18:48.14:0,48,1097	0/0:12,0:12:27.09:0,27,660	0/0:32,0:32:45.10:0,45,851	0/0:31,0:31:81.26:0,81,1915	0/0:33,0:33:72.16:0,72,1583	0/0:20,0:20:48.16:0,48,1069	0/0:16,0:16:28.39:0,28,672	0/0:27,0:27:60.21:0,60,1494	0/0:26,0:26:63.20:0,63,1464	0/0:30,0:30:63.20:0,63,1494	0/0:27,0:27:63.17:0,63,1451	0/0:20,0:20:60.19:0,60,1456
chr10	78831829	.	TTCTC	T	865.26	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=1.862;DP=569;FS=18.357;HRun=0;HaplotypeScore=107.0315;InbreedingCoeff=0.3853;MQ=69.59;MQ0=23;MQRankSum=2.385;QD=3.90;ReadPosRankSum=1.762;VQSLOD=0.8565;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:30:30.07:347,30,0	1/1:4,0:4:2.37:9,2,0	0/0:29,0:14:0:0,0,0	0/0:36,0:21:0.47:0,0,1	0/1:25,0:25:65.67:66,0,78	0/0:35,0:33:26.95:0,27,353	0/0:15,0:15:5.73:0,6,89	0/0:29,0:28:18.93:0,19,233	0/0:17,0:17:15.52:0,16,232	0/1:18,0:17:14.64:15,0,59	0/0:18,0:18:3:0,3,25	0/0:11,0:11:9.49:0,9,129	1/1:11,0:11:7.77:82,8,0	0/1:19,0:19:17.21:28,0,17	0/1:24,0:23:36.66:37,0,214	0/0:17,0:17:9.86:0,10,84	0/0:13,0:11:14.98:0,15,189	1/1:14,0:14:18.06:240,18,0	0/0:18,0:16:12.04:0,12,198	1/1:21,5:25:2.84:19,3,0	0/0:23,0:22:11.10:0,11,175	0/0:14,7:21:1.41:0,1,3	1/1:7,0:7:8.67:131,9,0	1/1:26,0:25:7.40:40,7,0	0/0:23,0:23:11.87:0,12,138	0/0:21,0:21:17.81:0,18,327	0/1:16,0:16:24.07:24,0,175	0/0:21,0:21:11.52:0,12,139
chr10	78831866	.	TCTCTCACA	T	2766.42	PASS	AB=0.974;AC=26;AF=0.500;AN=52;BaseQRankSum=0.218;DP=485;FS=9.586;HRun=0;HaplotypeScore=121.5620;InbreedingCoeff=-0.3145;MQ=46.47;MQ0=38;MQRankSum=2.989;QD=6.80;ReadPosRankSum=-1.302;VQSLOD=1.5605;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:31:99:274,0,250	1/1:4,0:4:1.95:8,2,0	./.	./.	0/1:21,0:20:64.30:64,0,135	0/1:28,0:26:71.92:72,0,365	0/0:19,0:19:8.71:0,9,128	0/0:15,0:14:24.04:0,24,291	0/0:9,0:9:15.05:0,15,252	0/1:22,0:18:63.47:89,0,63	0/0:13,0:13:3:0,3,26	0/1:14,0:12:99:132,0,108	1/1:22,0:20:41.98:536,42,0	0/1:6,15:21:17.21:47,0,17	0/1:23,0:19:99:356,0,191	0/1:17,0:17:69.53:70,0,125	0/1:20,0:17:46.84:47,0,283	0/1:14,0:12:99:146,0,202	0/1:11,0:8:28:28,0,183	1/1:20,0:18:7.10:65,7,0	0/1:28,0:23:99:148,0,182	1/1:22,0:22:13.59:212,14,0	0/1:18,0:17:26.66:119,0,27	1/1:32,0:30:31.33:380,31,0	0/0:10,0:16:11.87:0,12,168	0/1:16,0:15:29.01:29,0,354	0/1:12,0:12:63.05:63,0,198	0/1:9,0:8:45.30:45,0,115
chr10	78831870	.	TCACA	T	2787.64	PASS	AB=0.924;AC=33;AF=0.635;AN=52;BaseQRankSum=-3.235;DP=483;FS=3.617;HRun=0;HaplotypeScore=103.9700;InbreedingCoeff=0.4022;MQ=46.31;MQ0=38;MQRankSum=1.942;QD=8.35;ReadPosRankSum=-1.250;VQSLOD=2.5954;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:26.23:0,26,322	1/1:5,0:5:3.01:45,3,0	./.	./.	0/0:16,6:21:2.94:0,3,18	0/1:25,0:24:18.42:139,0,18	0/0:13,0:19:3:0,3,40	0/0:16,0:15:3:0,3,27	1/1:10,0:9:2.97:20,3,0	1/1:21,0:17:8.99:131,9,0	0/0:4,7:11:0:0,0,0	1/1:15,0:13:15.05:202,15,0	1/1:24,0:21:41.66:553,42,0	1/1:20,0:20:2.37:8,2,0	1/1:20,0:16:27.09:400,27,0	1/1:18,0:18:14.69:179,15,0	0/1:19,0:17:24.06:64,0,24	0/0:15,0:13:13.40:0,13,195	1/1:12,0:10:5.99:86,6,0	1/1:21,0:19:7.27:85,7,0	1/1:30,0:25:4.73:229,5,0	1/1:23,0:23:18.06:256,18,0	0/0:14,6:19:3.48:0,3,38	1/1:31,0:29:23.19:341,23,0	0/0:12,0:13:2.87:0,3,15	0/1:13,0:16:26.77:50,0,27	1/1:10,0:11:8.61:97,9,0	1/1:4,0:8:6.01:61,6,0
chr10	78835753	.	TAA	T	9483.79	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=4.039;DP=476;FS=35.214;HRun=11;HaplotypeScore=61.6503;InbreedingCoeff=0.9612;MQ=72.50;MQ0=5;MQRankSum=0.692;QD=24.01;ReadPosRankSum=3.393;VQSLOD=2.0752;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:48.11:511,48,0	1/1:0,3:3:9.02:96,9,0	0/0:18,0:14:17.97:0,18,185	0/0:18,0:15:8.90:0,9,209	1/1:2,17:19:45.07:479,45,0	1/1:1,16:17:42.10:447,42,0	1/1:1,18:19:45.11:479,45,0	1/1:4,33:36:93.15:964,93,0	1/1:0,0:14:27.45:120,27,0	1/1:3,13:16:39.09:415,39,0	1/1:0,14:14:36.04:371,36,0	1/1:0,15:15:39.10:415,39,0	1/1:3,12:14:27.05:287,27,0	1/1:3,12:15:33.06:351,33,0	1/1:3,15:18:36.08:383,36,0	1/1:2,11:13:27.06:287,27,0	0/0:19,0:19:51.14:0,51,760	0/0:21,0:24:65.19:0,65,915	1/1:2,13:15:39.03:387,39,0	1/1:2,13:16:41.84:427,42,0	1/1:1,12:13:36.09:383,36,0	1/1:1,14:14:33.08:351,33,0	1/1:0,14:14:36.08:383,36,0	1/1:3,22:25:54.12:575,54,0	1/1:1,7:8:18.04:192,18,0	1/1:2,19:20:48.09:511,48,0	1/1:2,13:14:33.08:351,33,0	1/1:3,11:14:30.06:319,30,0
chr10	78836488	.	T	TA	721.93	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-2.999;DP=288;FS=8.283;HRun=9;HaplotypeScore=32.3727;InbreedingCoeff=0.8088;MQ=70.84;MQ0=3;MQRankSum=0.879;QD=16.04;ReadPosRankSum=0.636;VQSLOD=2.5147;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:37.97:0,38,328	0/0:9,0:9:26.99:0,27,234	0/0:17,0:12:6.48:0,6,123	0/0:13,0:9:17.56:0,18,162	0/0:8,0:8:20.96:0,21,176	0/0:12,0:12:26.98:0,27,231	0/0:14,0:14:38.89:0,39,322	0/0:21,0:21:59.97:0,60,518	0/0:9,0:9:26.99:0,27,234	0/0:9,0:9:20.98:0,21,182	0/0:7,0:7:15:0,15,130	1/1:0,4:4:12.03:133,12,0	1/1:0,6:6:9.02:100,9,0	1/1:0,5:5:15.04:166,15,0	0/0:8,0:8:14.99:0,15,130	0/0:7,0:7:18:0,18,156	0/0:23,0:23:59.96:0,60,518	0/0:11,0:11:32.99:0,33,286	0/0:21,0:21:50.96:0,51,436	0/0:6,0:6:18:0,18,156	0/0:4,0:4:12:0,12,104	1/1:0,3:3:6.02:66,6,0	1/1:1,8:9:24.06:266,24,0	1/1:2,4:6:15.02:155,15,0	0/0:9,0:9:26.98:0,27,231	0/1:12,0:12:14.28:14,0,112	0/0:2,0:3:8.04:0,8,58	0/0:15,0:15:38.95:0,39,338
chr10	78836675	.	GGGGGT	G	361.61	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=3.134;DP=266;FS=15.231;HRun=0;HaplotypeScore=62.6042;InbreedingCoeff=0.6289;MQ=78.37;MQ0=6;MQRankSum=-3.764;QD=10.04;ReadPosRankSum=-1.972;VQSLOD=0.4747;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:33.09:0,33,780	./.	0/0:20,0:13:30.08:0,30,498	0/0:26,0:10:21.07:0,21,426	0/0:5,0:5:6.02:0,6,172	1/1:7,11:14:21.06:291,21,0	1/1:11,7:13:11:184,11,0	0/0:9,0:9:15.05:0,15,442	0/0:10,0:10:18.06:0,18,434	0/0:8,0:8:18.06:0,18,533	0/0:4,0:4:12.04:0,12,353	0/0:3,0:3:6.02:0,6,173	0/0:7,0:7:6.40:0,6,133	0/0:10,0:10:24.08:0,24,654	0/0:7,0:7:3.01:0,3,89	0/0:16,0:16:42.14:0,42,1178	0/0:16,0:15:33.11:0,33,900	0/0:9,0:9:27.09:0,27,735	0/0:9,0:9:18.04:0,18,321	0/0:4,0:4:12.04:0,12,315	0/0:10,0:10:21.07:0,21,553	0/0:6,0:6:18.04:0,18,467	0/0:7,0:7:18.06:0,18,521	0/0:7,0:7:15.05:0,15,347	0/0:6,0:6:6.02:0,6,178	0/0:9,0:9:6.52:0,7,316	0/0:5,0:4:12.01:0,12,283	0/0:3,0:3:6.49:0,6,178
chr10	78836700	.	G	GAGAGAC	2050.65	PASS	AB=1.000;AC=34;AF=0.654;AN=52;BaseQRankSum=0.330;DP=360;FS=4.875;HRun=0;HaplotypeScore=92.5519;InbreedingCoeff=0.3756;MQ=44.70;MQ0=22;MQRankSum=-0.432;QD=9.20;ReadPosRankSum=2.282;VQSLOD=1.8074;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:10.12:0,10,117	./.	0/0:17,0:2:3:0,3,29	0/0:23,0:5:3:0,3,29	1/1:7,0:8:5.98:47,6,0	0/0:21,0:16:4.77:0,5,35	0/0:19,0:9:5.92:0,6,42	1/1:26,0:25:0.13:299,0,0	0/0:12,0:11:17.99:0,18,196	1/1:13,0:12:28.06:309,28,0	1/1:5,0:5:9:109,9,0	1/1:10,0:8:2:39,2,0	1/1:10,0:8:2.19:43,2,0	0/1:13,0:13:15.12:56,0,15	1/1:3,9:14:6.02:135,6,0	1/1:20,0:16:10.82:256,11,0	0/0:11,0:10:29.40:0,29,467	0/1:9,0:9:3.67:4,0,89	0/1:11,0:11:27.62:136,0,28	1/1:5,0:5:8.98:72,9,0	1/1:10,0:8:11.98:99,12,0	1/1:9,0:9:2.45:22,2,0	1/1:17,0:16:2.22:24,2,0	1/1:12,0:10:3:48,3,0	./.	1/1:12,0:12:19.87:207,20,0	0/1:11,0:9:0.94:200,0,1	1/1:8,0:6:8.98:106,9,0
chr10	78836702	.	G	GAGAC	1456.99	PASS	AB=1.000;AC=26;AF=0.500;AN=52;BaseQRankSum=-0.221;DP=364;FS=5.593;HRun=0;HaplotypeScore=73.6257;InbreedingCoeff=0.1642;MQ=44.36;MQ0=24;MQRankSum=2.870;QD=7.28;ReadPosRankSum=3.654;VQSLOD=0.5978;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:14.98:0,15,124	./.	0/0:17,0:2:3:0,3,29	0/0:23,0:5:3:0,3,29	1/1:9,0:9:5.98:47,6,0	0/0:21,0:16:7.65:0,8,51	0/0:19,0:9:5.92:0,6,42	0/1:27,0:26:81.53:193,0,82	0/0:12,0:11:17.97:0,18,170	1/1:13,0:12:4.22:246,4,0	1/1:6,0:6:8.89:74,9,0	0/0:10,0:8:0.89:0,1,2	0/1:12,0:9:14.95:15,0,18	0/1:13,0:13:36.90:45,0,37	1/1:12,0:12:6.02:115,6,0	0/1:20,0:16:10.93:244,0,11	0/0:11,0:10:29.40:0,29,402	0/1:9,0:9:4.64:5,0,91	0/1:11,0:11:81.85:82,0,84	1/1:6,0:6:8.98:72,9,0	1/1:10,0:8:11.32:98,11,0	1/1:9,0:9:2.98:23,3,0	0/0:17,0:16:5.78:0,6,47	1/1:12,0:10:2.88:24,3,0	./.	0/1:12,0:12:8.87:178,0,9	0/1:11,0:9:25.10:104,0,25	1/1:8,0:6:8.84:55,9,0
chr10	78836727	.	AGAGAGAGAGGGAGG	A	1607.77	PASS	AB=1.000;AC=20;AF=0.400;AN=50;BaseQRankSum=-0.983;DP=352;FS=18.802;HRun=0;HaplotypeScore=119.6420;InbreedingCoeff=-0.0914;MQ=42.50;MQ0=24;MQRankSum=0.745;QD=7.48;ReadPosRankSum=-4.385;VQSLOD=-0.5173;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:5,21:24:0.47:0,0,1	./.	./.	0/0:18,0:7:15.05:0,15,242	1/1:12,0:12:12.04:200,12,0	1/1:17,0:14:15:196,15,0	0/1:20,0:13:3.40:120,0,3	1/1:23,0:23:10.28:236,10,0	0/0:14,0:13:8.99:0,9,146	0/1:16,0:15:99:261,0,113	0/1:6,0:6:37.83:112,0,38	0/0:9,0:7:6.49:0,6,168	0/1:12,0:9:11.39:11,0,187	0/1:11,0:11:35.34:35,0,250	0/0:9,0:9:6.49:0,6,249	0/1:18,0:14:99:121,0,178	0/0:16,0:15:42.11:0,42,1159	0/0:8,0:8:15.43:0,15,593	0/1:15,0:12:99:140,0,324	./.	0/1:6,0:4:44.85:45,0,116	0/0:13,0:13:0.37:0,0,3	0/1:21,0:19:18.23:18,0,230	0/0:11,0:9:8.87:0,9,233	1/1:5,0:5:3.01:52,3,0	0/1:14,0:14:22.31:22,0,279	0/1:11,0:10:99:152,0,138	0/1:8,0:7:37.03:41,0,37
chr10	78836733	.	AGAGG	A	2344.72	PASS	AB=1.000;AC=37;AF=0.685;AN=54;BaseQRankSum=0.896;DP=367;FS=17.877;HRun=0;HaplotypeScore=77.1820;InbreedingCoeff=0.2450;MQ=47.73;MQ0=22;MQRankSum=0.971;QD=8.50;ReadPosRankSum=-4.614;VQSLOD=-0.7228;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:0:0,0,0	1/1:3,0:3:8.98:74,9,0	0/0:10,0:1:2.88:0,3,15	0/0:22,0:12:16.64:0,17,134	1/1:11,0:11:17.98:150,18,0	1/1:16,0:15:13.19:97,13,0	1/1:21,0:15:19.92:146,20,0	1/1:19,0:19:33.16:186,33,0	1/1:3,12:14:6.02:105,6,0	1/1:19,0:18:35.24:354,35,0	1/1:8,0:8:16.73:121,17,0	0/1:9,0:7:12.44:35,0,12	1/1:13,0:10:20.88:163,21,0	1/1:10,0:10:18.84:158,19,0	0/1:10,0:10:15.98:16,0,44	1/1:17,0:13:1.33:150,1,0	0/0:17,0:16:39.01:0,39,502	0/0:10,0:10:17.95:0,18,243	0/1:14,0:11:44.31:73,0,44	./.	0/1:7,0:5:9.89:64,0,10	1/1:12,0:12:11.98:100,12,0	1/1:22,0:20:32.25:254,32,0	0/1:12,0:10:10.08:57,0,10	1/1:5,0:5:6:52,6,0	0/1:14,0:14:36.27:46,0,36	0/1:11,0:10:3.60:90,0,4	1/1:8,0:7:1.02:20,1,0
chr10	78836735	.	AGGGAGG	A	4112.68	PASS	AB=0.964;AC=34;AF=0.630;AN=54;BaseQRankSum=-1.281;DP=366;FS=38.155;HRun=0;HaplotypeScore=80.8789;InbreedingCoeff=0.1337;MQ=51.39;MQ0=22;MQRankSum=0.105;QD=15.01;ReadPosRankSum=-4.802;VQSLOD=-0.6430;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:0.47:0,0,1	1/1:3,0:3:9.03:151,9,0	0/0:9,0:1:2.50:0,2,9	0/1:26,0:14:28.98:29,0,265	1/1:12,0:12:21.07:348,21,0	1/1:16,0:15:15.95:209,16,0	1/1:20,0:15:20.58:292,21,0	1/1:18,0:18:51.47:589,51,0	0/0:15,0:14:3.59:0,4,10	1/1:20,0:19:35.27:696,35,0	1/1:8,0:8:18.03:261,18,0	0/0:9,0:7:3.94:0,4,29	0/1:13,0:10:0.68:43,0,1	0/1:10,0:10:58.20:63,0,58	0/1:9,0:9:34.39:34,0,50	1/1:16,0:12:4.57:276,5,0	0/0:17,0:16:45.12:0,45,905	0/1:10,0:10:18.93:19,0,397	0/1:9,6:11:35.89:200,0,36	./.	0/1:7,0:5:8.83:139,0,9	1/1:10,0:10:1.34:22,1,0	0/1:22,0:20:36.90:37,0,39	0/0:11,0:10:2.88:0,3,70	1/1:6,0:6:9.03:155,9,0	1/1:14,0:14:30.27:252,30,0	1/1:11,0:10:0.12:214,0,0	1/1:8,0:7:8.91:84,9,0
chr10	78836745	.	A	AGAGAGAGG	860.34	PASS	AB=0.959;AC=13;AF=0.241;AN=54;BaseQRankSum=3.993;DP=408;FS=7.382;HRun=0;HaplotypeScore=120.1717;InbreedingCoeff=-0.0788;MQ=63.52;MQ0=18;MQRankSum=-1.451;QD=5.18;ReadPosRankSum=-3.248;VQSLOD=0.9634;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:3,0:3:0.06:0,0,0	0/0:25,0:9:9.51:0,10,181	0/0:43,0:28:22.65:0,23,791	0/1:11,0:11:28.94:29,0,94	0/1:13,0:13:8.21:8,0,60	0/1:19,0:16:2.10:2,0,94	0/1:17,0:17:52.96:93,0,53	0/0:14,0:13:8.06:0,8,134	0/1:27,0:26:73.51:74,0,245	0/1:8,0:8:4.58:5,0,58	0/0:10,0:8:11.87:0,12,198	0/0:12,0:10:7.76:0,8,359	0/0:13,0:13:4.49:0,4,473	0/1:12,0:12:16.97:75,0,17	0/0:15,0:11:23.65:0,24,181	0/0:16,0:15:45.12:0,45,1063	0/0:10,0:10:20.56:0,21,492	0/1:14,0:9:18.49:54,0,18	0/0:7,0:6:3:0,3,25	0/0:7,0:5:3.87:0,4,24	0/0:11,0:11:21.05:0,21,426	0/0:18,0:17:42.12:0,42,816	0/0:12,0:11:13.60:0,14,230	0/1:7,0:7:15.90:16,0,41	0/1:3,9:16:2.14:493,0,2	0/1:14,0:13:33.70:34,0,49	1/1:8,0:7:9.02:121,9,0
chr10	78838570	.	G	GA	14124.08	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=19.224;DP=587;FS=24.120;HRun=1;HaplotypeScore=149.5765;InbreedingCoeff=0.9985;MQ=80.49;MQ0=0;MQRankSum=-15.430;QD=41.91;ReadPosRankSum=-3.787;VQSLOD=1.4624;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,39:40:99:1655,111,0	1/1:1,8:9:24.08:383,24,0	0/0:19,0:19:51.62:0,52,685	0/0:28,0:28:81.23:0,81,1051	1/1:0,14:14:30.10:462,30,0	1/1:1,15:16:42.14:669,42,0	1/1:0,22:22:63.21:992,63,0	1/1:2,24:26:78.18:1190,78,0	0/0:25,0:25:75.23:0,75,1028	1/1:1,21:22:57.19:909,57,0	1/1:1,12:13:33.11:498,33,0	0/0:16,0:16:48.16:0,48,671	0/0:29,0:29:87.28:0,87,1196	0/0:19,0:19:54.18:0,54,755	1/1:1,28:29:84.29:1336,84,0	1/1:1,19:20:54.18:861,54,0	0/0:23,0:23:66.20:0,66,893	0/0:12,0:12:36.12:0,36,499	1/1:1,13:14:33.11:527,33,0	1/1:0,22:22:66.23:1049,66,0	1/1:2,13:15:27.09:405,27,0	0/0:24,0:24:69.23:0,69,963	0/0:23,0:23:63.21:0,63,881	0/0:32,0:32:93.31:0,93,1299	1/1:0,20:20:60.20:956,60,0	1/1:0,9:9:24.08:379,24,0	1/1:0,33:33:96.33:1516,96,0	1/1:1,12:13:21.07:335,21,0
chr10	78838945	.	A	AT	16954.47	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=14.845;DP=714;FS=12.357;HRun=1;HaplotypeScore=108.7824;InbreedingCoeff=0.9845;MQ=85.58;MQ0=0;MQRankSum=-5.612;QD=39.89;ReadPosRankSum=-0.971;VQSLOD=3.1453;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,47:48:99:1879,129,0	1/1:0,7:7:21:287,21,0	0/0:23,0:23:63.15:0,63,776	0/0:26,0:26:72.02:0,72,842	1/1:2,20:22:54.04:733,54,0	1/1:1,17:18:51.17:763,51,0	1/1:1,28:29:78.26:1169,78,0	1/1:1,38:39:99:1625,111,0	0/0:26,0:26:78.25:0,78,1012	1/1:3,29:32:84.26:1235,84,0	1/1:2,18:20:45.02:621,45,0	0/0:21,0:21:60.18:0,60,763	0/0:31,0:31:90.28:0,90,1154	0/0:25,0:25:72.23:0,72,934	1/1:0,20:20:60.20:897,60,0	1/1:0,25:25:69.23:1029,69,0	0/0:30,0:30:90.29:0,90,1167	0/0:27,0:27:72.19:0,72,915	1/1:1,18:19:57.19:843,57,0	1/1:1,36:37:99:1508,105,0	1/1:0,27:27:81.27:1214,81,0	0/0:25,0:25:75.24:0,75,974	0/0:28,0:27:81.26:0,81,1040	0/0:27,0:27:75.21:0,75,944	1/1:0,19:19:51.17:762,51,0	1/1:2,33:35:99:1471,99,0	1/1:2,21:22:57.15:829,57,0	1/1:0,5:5:6.02:90,6,0
chr10	78839170	.	G	GA	14748.13	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=15.763;DP=630;FS=8.555;HRun=0;HaplotypeScore=105.6067;InbreedingCoeff=0.9982;MQ=82.70;MQ0=0;MQRankSum=-8.869;QD=42.87;ReadPosRankSum=-4.321;VQSLOD=2.4309;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,46:51:99:1976,129,0	1/1:1,6:7:21.06:301,21,0	0/0:17,0:17:51.03:0,51,672	0/0:27,0:27:75.09:0,75,936	1/1:2,20:22:60.19:931,60,0	1/1:2,19:21:63.20:967,63,0	1/1:0,13:13:39.13:612,39,0	1/1:2,17:19:54.18:861,54,0	0/0:20,0:20:57.15:0,57,747	1/1:1,18:19:57.17:885,57,0	1/1:3,17:20:51.16:786,51,0	0/0:19,0:19:57.18:0,57,782	0/0:20,0:20:60.20:0,60,835	0/0:23,0:23:66.21:0,66,903	1/1:3,25:28:84.19:1257,84,0	1/1:1,14:15:45.15:706,45,0	0/0:47,0:47:99:0,141,1969	0/0:22,0:22:66.22:0,66,921	1/1:3,15:18:48.16:754,48,0	1/1:3,24:27:81.19:1209,81,0	1/1:4,10:14:30.05:427,30,0	0/0:32,0:32:90.28:0,90,1219	0/0:30,0:30:87.28:0,87,1190	0/0:29,0:29:87.29:0,87,1217	1/1:2,13:14:42.07:637,42,0	1/1:1,20:21:60.20:948,60,0	1/1:6,22:28:81.23:1208,81,0	1/1:0,6:6:18.06:287,18,0
chr10	78839196	.	TG	T	9867.24	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=17.325;DP=631;FS=4.036;HRun=6;HaplotypeScore=103.9128;InbreedingCoeff=0.9973;MQ=83.80;MQ0=0;MQRankSum=-10.391;QD=28.19;ReadPosRankSum=-1.840;VQSLOD=4.0077;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,46:47:99:1320,123,0	1/1:1,9:10:27.07:290,27,0	0/0:23,0:23:66.18:0,66,829	0/0:23,0:23:38.01:0,38,503	1/1:3,14:17:45.09:467,45,0	1/1:0,20:20:60.15:644,60,0	1/1:1,12:13:36.09:387,36,0	1/1:3,21:24:69.16:733,69,0	0/0:20,0:20:57.19:0,57,749	1/1:1,19:20:57.14:612,57,0	1/1:0,22:22:63.16:676,63,0	0/0:25,0:25:75.20:0,75,952	0/0:24,0:24:69.19:0,69,864	0/0:22,0:22:60.18:0,60,770	1/1:3,24:27:72.18:773,72,0	1/1:3,11:14:36.09:386,36,0	0/0:36,0:36:99:0,102,1328	0/0:20,0:20:57.17:0,57,735	1/1:2,11:13:30.06:314,30,0	1/1:3,25:28:66.16:707,66,0	1/1:0,14:14:27.07:290,27,0	0/0:30,0:30:87.27:0,87,1127	0/0:33,0:33:99:0,99,1296	0/0:25,0:25:72.23:0,72,946	1/1:1,17:18:54.11:570,54,0	1/1:4,26:30:78.18:827,78,0	1/1:6,22:28:66.16:709,66,0	1/1:0,5:5:15.04:161,15,0
chr10	78839634	.	G	GTC	20667.04	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-17.548;DP=614;FS=8.550;HRun=0;HaplotypeScore=60.4529;InbreedingCoeff=0.9993;MQ=79.82;MQ0=1;MQRankSum=-2.313;QD=53.13;ReadPosRankSum=0.774;VQSLOD=5.1759;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:66.23:1275,66,0	1/1:0,7:7:21.07:406,21,0	0/0:12,0:12:33.11:0,33,504	0/0:21,0:21:54.14:0,54,786	1/1:1,34:35:99:1970,102,0	1/1:0,28:29:84.29:1623,84,0	1/1:0,15:15:45.15:869,45,0	1/1:2,28:30:87.30:1679,87,0	0/0:19,0:19:57.19:0,57,873	1/1:0,27:27:81.26:1532,81,0	1/1:0,26:25:69.24:1333,69,0	0/0:10,0:10:30.10:0,30,459	0/0:18,0:18:54.18:0,54,824	0/0:19,0:19:54.17:0,54,806	1/1:1,15:16:42.14:811,42,0	1/1:0,17:18:51.17:978,51,0	0/0:32,0:32:93.32:0,93,1423	0/0:18,0:18:51.13:0,51,746	1/1:1,11:13:36.12:666,36,0	1/1:0,32:32:90.31:1737,90,0	1/1:0,19:19:54.66:1044,55,0	0/0:27,0:27:78.25:0,78,1172	0/0:31,0:31:87.28:0,87,1310	0/0:18,0:18:54.16:0,54,803	1/1:0,19:20:45.15:869,45,0	1/1:1,24:25:72.25:1392,72,0	1/1:2,31:33:90.31:1730,90,0	1/1:0,16:16:39.13:753,39,0
chr10	78840191	.	AACACACAC	A	1993.28	PASS	AB=0.953;AC=38;AF=0.826;AN=46;BaseQRankSum=2.593;DP=461;FS=4.690;HRun=0;HaplotypeScore=147.1324;InbreedingCoeff=0.1234;MQ=65.12;MQ0=17;MQRankSum=-2.228;QD=6.00;ReadPosRankSum=2.155;VQSLOD=2.3570;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:26:10.10:85,10,0	1/1:9,0:8:3.01:74,3,0	./.	./.	1/1:17,0:17:9.03:128,9,0	1/1:19,0:19:3.01:56,3,0	0/1:24,0:24:0:0,0,0	0/0:18,0:18:0:0,0,0	1/1:13,0:17:11.07:165,11,0	1/1:16,0:16:4.52:103,5,0	./.	1/1:12,1:14:5.72:110,6,0	1/1:7,3:11:9.03:201,9,0	0/1:10,0:12:6.94:7,0,40	0/1:17,0:16:2.43:108,0,2	1/1:18,0:17:3.01:56,3,0	./.	1/1:13,1:14:3:74,3,0	1/1:7,0:7:2.68:11,3,0	0/1:17,0:17:47.90:56,0,48	0/0:23,0:23:6.02:0,6,166	1/1:11,5:17:9.03:198,9,0	./.	1/1:20,0:19:3.01:45,3,0	1/1:11,0:11:15.05:291,15,0	1/1:14,0:13:3.01:56,3,0	1/1:19,0:18:3.01:56,3,0	1/1:11,0:11:12.04:223,12,0
chr10	78843929	.	TCCCG	T	8536.70	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=16.234;DP=522;FS=43.752;HRun=0;HaplotypeScore=101.0439;InbreedingCoeff=0.9946;MQ=89.97;MQ0=0;MQRankSum=-7.581;QD=49.92;ReadPosRankSum=7.273;VQSLOD=3.0725;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.30:0,87,2366	1/1:0,10:10:24.08:465,24,0	0/0:23,0:23:69.14:0,69,1711	0/0:30,0:30:56.71:0,57,2012	1/1:0,17:17:42.14:807,42,0	0/0:24,0:24:63.20:0,63,1611	0/0:20,0:20:60.20:0,60,1552	1/1:1,4:5:12.04:232,12,0	0/0:23,0:23:66.23:0,66,1758	1/1:1,12:13:36.12:698,36,0	1/1:0,14:14:36.12:697,36,0	0/0:19,0:19:57.12:0,57,1332	0/0:24,0:24:69.21:0,69,1742	0/0:21,0:21:57.18:0,57,1387	1/1:0,19:19:48.16:929,48,0	1/1:0,22:22:60.21:1158,60,0	0/0:27,0:27:81.28:0,81,2167	0/0:21,0:21:63.22:0,63,1719	1/1:0,8:8:21.07:407,21,0	1/1:0,15:15:39.13:726,39,0	1/1:1,18:18:45.15:847,45,0	0/0:14,0:14:36.11:0,36,896	0/0:10,0:10:27.09:0,27,720	0/0:22,0:22:60.21:0,60,1583	1/1:0,16:16:48.16:911,48,0	0/0:25,0:25:75.26:0,75,1945	1/1:0,13:13:36.12:661,36,0	0/0:16,0:16:48.15:0,48,1255
chr10	78851580	.	A	AT	815.59	PASS	AC=8;AF=0.500;AN=16;BaseQRankSum=-1.825;DP=137;FS=0.000;HRun=0;HaplotypeScore=13.7423;MQ=40.60;MQ0=69;MQRankSum=-2.961;QD=32.62;ReadPosRankSum=3.042;VQSLOD=3.0557;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,4:4:12.04:191,12,0	0/0:11,0:2:6.02:0,6,81	0/0:8,0:1:3.01:0,3,39	./.	./.	./.	./.	1/1:1,6:5:15.05:239,15,0	./.	./.	./.	./.	./.	1/1:0,4:4:12.04:191,12,0	./.	1/1:3,7:7:18.06:287,18,0	./.	./.	./.	0/0:4,14:5:0:0,0,0	./.	./.	0/0:5,0:2:3.01:0,3,41	./.	./.	./.	./.
chr10	78853521	.	G	GA	4892.13	PASS	AB=0.800;AC=24;AF=0.429;AN=56;BaseQRankSum=-7.370;DP=504;FS=8.553;HRun=8;HaplotypeScore=52.7750;InbreedingCoeff=0.8396;MQ=71.38;MQ0=1;MQRankSum=0.049;QD=23.52;ReadPosRankSum=1.315;VQSLOD=5.3662;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:14.62:408,15,0	0/0:10,0:10:27.01:0,27,247	0/0:14,0:14:4.77:0,5,196	0/1:8,0:9:8.58:9,0,94	0/0:34,0:33:65.99:0,66,604	1/1:4,20:25:60.01:672,60,0	0/1:4,8:12:27.64:215,0,28	0/0:26,0:26:59.98:0,60,539	1/1:0,15:15:36.11:415,36,0	0/0:31,0:31:81.01:0,81,736	0/0:21,0:22:56.06:0,56,500	1/1:0,14:14:33.10:380,33,0	1/1:0,13:13:30.09:346,30,0	1/1:2,8:10:18.05:208,18,0	0/0:16,0:16:39.02:0,39,357	0/0:11,0:11:30.01:0,30,275	0/0:21,0:21:50.99:0,51,460	0/0:15,0:14:36.02:0,36,329	0/0:13,0:13:36.01:0,36,325	0/0:25,0:25:72.03:0,72,659	0/0:17,0:17:45.02:0,45,411	1/1:5,13:18:36.07:400,36,0	1/1:1,20:22:44.97:499,45,0	1/1:2,9:11:24.07:277,24,0	0/0:17,0:17:29.99:0,30,274	1/1:4,26:30:75.21:854,75,0	0/0:24,0:24:60.03:0,60,549	1/1:1,9:9:18.05:208,18,0
chr10	78853779	.	GGA	G	5765.40	PASS	AC=40;AF=1.000;AN=40;DP=124;FS=0.000;HRun=0;HaplotypeScore=91.2498;InbreedingCoeff=-0.0388;MQ=28.91;MQ0=0;QD=46.50;VQSLOD=6.0297;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,1:1:3.01:48,3,0	./.	./.	1/1:0,13:13:33.11:519,33,0	1/1:0,12:12:36.12:575,36,0	1/1:0,3:3:9.03:144,9,0	1/1:0,3:3:9.03:145,9,0	1/1:0,2:2:6.02:96,6,0	1/1:0,14:14:42.14:673,42,0	1/1:0,11:11:33.11:513,33,0	1/1:0,2:2:6.02:96,6,0	1/1:0,4:4:12.04:191,12,0	1/1:0,5:5:15.05:238,15,0	1/1:0,3:3:9.03:144,9,0	1/1:0,7:7:21.07:335,21,0	./.	./.	1/1:0,2:2:6.02:97,6,0	1/1:0,7:7:21.07:335,21,0	./.	1/1:0,4:4:12.04:191,12,0	1/1:0,5:5:15.05:239,15,0	./.	1/1:0,5:5:15.05:239,15,0	1/1:0,9:9:27.09:424,27,0	1/1:0,12:11:33.11:526,33,0	./.
chr10	78854834	.	CTG	C	5729.60	PASS	AB=0.581;AC=27;AF=0.482;AN=56;BaseQRankSum=0.269;DP=533;FS=11.359;HRun=0;HaplotypeScore=83.5060;InbreedingCoeff=0.8891;MQ=65.40;MQ0=1;MQRankSum=-1.537;QD=20.39;ReadPosRankSum=1.132;VQSLOD=4.6250;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,8:15:21.06:252,21,0	1/1:1,8:9:17.59:215,18,0	0/0:29,0:21:34.29:0,34,379	0/0:12,0:10:15.52:0,16,216	1/1:8,19:27:48.14:570,48,0	0/0:27,0:27:36.43:0,36,784	0/0:17,1:18:3.18:0,3,540	1/1:15,9:25:29.52:291,30,0	0/0:13,0:13:30.10:0,30,477	1/1:1,14:16:41.96:456,42,0	0/1:7,17:25:0.15:447,0,0	0/0:6,0:15:12:0,12,106	0/0:4,0:12:24.01:0,24,233	0/0:3,0:12:24:0,24,211	1/1:3,15:18:17.85:215,18,0	1/1:2,19:21:42.13:503,42,0	0/0:26,0:26:53.53:0,54,790	1/1:2,6:8:1.07:196,1,0	1/1:6,17:23:51.11:576,51,0	1/1:5,30:35:78.24:932,78,0	1/1:5,9:14:18:216,18,0	0/0:5,0:27:56.14:0,56,448	0/0:7,0:16:22.07:0,22,170	0/0:6,0:17:26.99:0,27,238	1/1:8,12:20:30.09:359,30,0	0/0:21,1:22:12.11:0,12,623	1/1:6,19:25:41.80:501,42,0	0/0:6,0:6:12.02:0,12,167
chr10	78854907	.	G	GA	1837.75	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.862;DP=536;FS=5.039;HRun=6;HaplotypeScore=59.7363;InbreedingCoeff=0.9965;MQ=86.71;MQ0=0;MQRankSum=-1.901;QD=28.71;ReadPosRankSum=0.775;VQSLOD=4.3157;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:24:57.17:704,57,0	0/0:12,0:12:30.07:0,30,306	0/0:22,0:22:51.08:0,51,506	0/0:15,0:14:30.06:0,30,303	0/0:26,0:26:75.17:0,75,765	0/0:23,0:23:57.13:0,57,582	0/0:10,0:10:27.06:0,27,275	0/0:35,0:35:99:0,102,1036	0/0:12,0:12:29.62:0,30,306	0/0:19,0:19:51.12:0,51,520	0/0:24,0:24:69.16:0,69,704	0/0:11,0:11:24.05:0,24,245	0/0:10,0:10:24.05:0,24,245	0/0:11,0:11:33.07:0,33,336	0/0:21,0:21:42.09:0,42,428	0/0:22,0:22:51.09:0,51,512	0/0:19,0:19:57.13:0,57,581	0/0:10,0:10:24.05:0,24,245	0/0:25,0:25:66.14:0,66,673	0/0:29,0:29:81.18:0,81,826	0/0:15,0:15:33.06:0,33,329	0/0:25,0:25:66.14:0,66,673	0/0:17,0:17:45.10:0,45,459	0/0:13,0:13:36.08:0,36,367	0/0:21,0:21:60.14:0,60,612	1/1:3,25:28:44.61:861,45,0	0/0:25,0:25:60.11:0,60,604	1/1:0,12:12:33.11:415,33,0
chr10	78855073	.	C	CAAAA	9167.02	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-2.474;DP=550;FS=3.290;HRun=10;HaplotypeScore=103.8856;InbreedingCoeff=0.9368;MQ=71.78;MQ0=0;MQRankSum=-5.513;QD=31.07;ReadPosRankSum=-4.685;VQSLOD=2.6854;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:48.09:0,48,677	1/1:2,4:7:15.05:304,15,0	0/0:10,0:9:18.03:0,18,228	0/0:9,0:10:4.06:0,4,104	1/1:8,17:34:81.27:1416,81,0	0/0:4,0:19:20.26:0,20,60	0/0:3,0:13:11.17:0,11,28	1/1:12,5:23:27.56:517,28,0	0/0:2,0:15:12.45:0,12,31	1/1:10,0:35:78.01:977,78,0	1/1:7,0:27:68.98:785,69,0	0/0:10,0:10:24.03:0,24,321	0/0:20,0:21:58.39:0,58,789	0/0:19,0:19:54.15:0,54,758	1/1:8,1:26:41.25:529,41,0	1/1:11,10:26:36.12:759,36,0	0/0:10,0:10:24.07:0,24,340	0/0:10,0:10:17.96:0,18,255	1/1:6,7:13:30.10:671,30,0	1/1:15,3:29:52.16:758,52,0	1/1:9,10:22:33.11:714,33,0	0/0:18,0:18:33.01:0,33,467	0/0:26,0:27:63.08:0,63,869	0/0:17,0:17:29.97:0,30,424	1/1:5,11:18:30.10:672,30,0	0/0:3,0:17:2.15:0,2,23	1/1:9,21:35:51.17:1064,51,0	0/0:2,0:18:22.93:0,23,92
chr10	78855830	.	AACAC	A	6467.03	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-4.988;DP=749;FS=3.309;HRun=0;HaplotypeScore=154.2717;InbreedingCoeff=0.9641;MQ=73.33;MQ0=13;MQRankSum=0.862;QD=26.18;ReadPosRankSum=2.834;VQSLOD=4.9481;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:31:11.93:0,12,123	0/0:3,0:9:12.04:0,12,224	0/0:35,0:27:23.54:0,24,333	0/0:30,0:26:19.84:0,20,370	0/0:13,0:32:37.47:0,37,912	1/1:9,27:35:18.51:932,19,0	1/1:8,16:24:8.07:563,8,0	0/0:17,0:27:34.79:0,35,672	1/1:5,20:25:33.11:545,33,0	0/0:14,0:31:63.25:0,63,1029	0/0:9,0:30:37.59:0,38,881	1/1:8,19:27:51.17:841,51,0	1/1:5,12:17:17.62:525,18,0	1/1:6,15:22:29.06:677,29,0	0/0:10,0:27:48.14:0,48,844	0/0:7,0:19:33.11:0,33,579	0/0:30,0:30:72.21:0,72,1594	0/0:16,0:15:33.11:0,33,700	0/0:19,0:21:21.55:0,22,597	0/0:13,0:34:8.51:0,9,817	0/0:11,0:27:36.41:0,36,758	1/1:8,16:24:41.71:693,42,0	1/1:7,26:35:53.58:1000,54,0	1/1:15,22:37:40.24:690,40,0	0/0:4,0:19:27.56:0,28,475	0/0:10,0:25:54.63:0,55,934	0/0:11,0:35:53.61:0,54,889	0/0:4,0:13:24.08:0,24,440
chr10	78856223	.	AT	A	3531.61	PASS	AB=0.716;AC=24;AF=0.429;AN=56;BaseQRankSum=10.512;DP=491;FS=7.604;HRun=10;HaplotypeScore=53.5597;InbreedingCoeff=0.8378;MQ=77.41;MQ0=0;MQRankSum=-0.342;QD=18.39;ReadPosRankSum=1.938;VQSLOD=4.2902;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:10:26.99:234,27,0	0/0:12,0:12:36.08:0,36,383	0/0:15,1:16:18.41:0,18,199	0/1:7,1:7:8.02:8,0,132	0/0:25,0:25:69.08:0,69,715	1/1:3,11:14:32.96:286,33,0	1/1:1,11:12:32.99:286,33,0	0/0:22,0:22:48.13:0,48,531	1/1:6,15:21:41.96:365,42,0	0/0:15,0:15:39.09:0,39,419	0/0:16,0:16:36.06:0,36,385	1/1:3,9:13:29.02:240,29,0	1/1:7,13:20:38.96:338,39,0	1/1:6,16:22:47.97:415,48,0	0/0:22,0:22:60.15:0,60,655	0/0:13,2:15:3.97:0,4,251	0/0:31,0:31:81.22:0,81,896	0/0:12,0:12:33.09:0,33,365	0/0:23,0:23:48.10:0,48,519	0/0:26,2:28:29.13:0,29,744	0/0:11,0:11:33.08:0,33,358	1/1:5,3:8:11.84:93,12,0	0/1:3,16:19:18.38:317,0,18	1/1:1,10:11:26.99:234,27,0	0/0:25,1:27:23.19:0,23,660	1/1:3,11:14:29.77:247,30,0	0/0:23,1:24:43.10:0,43,685	1/1:2,18:20:53.99:468,54,0
chr10	78857733	.	GA	G	292.98	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=5.277;DP=352;FS=4.232;HRun=8;HaplotypeScore=33.1444;InbreedingCoeff=0.7545;MQ=66.43;MQ0=0;MQRankSum=-0.224;QD=13.95;ReadPosRankSum=1.051;VQSLOD=2.5160;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:18.05:0,18,214	0/0:10,0:10:27.08:0,27,326	0/1:6,0:5:14.38:14,0,83	0/0:7,0:6:15.04:0,15,177	0/0:12,0:12:24.07:0,24,290	1/1:0,8:8:21.03:203,21,0	1/1:0,7:7:21.03:203,21,0	0/0:39,0:38:99:0,111,1341	0/0:12,0:12:36.11:0,36,435	0/0:12,0:12:33.10:0,33,391	0/0:5,0:5:12.04:0,12,145	0/0:11,0:11:33.10:0,33,398	0/0:14,0:14:39.12:0,39,470	0/0:9,0:9:27.08:0,27,326	0/0:9,0:9:27.08:0,27,326	0/0:19,0:19:51.16:0,51,616	0/0:17,0:17:51.14:0,51,603	0/0:21,0:21:60.18:0,60,721	0/0:15,0:15:45.14:0,45,543	0/0:8,0:8:21.06:0,21,254	0/0:7,0:7:18.06:0,18,217	0/0:6,0:6:18.06:0,18,217	0/0:13,0:13:33.09:0,33,387	0/0:8,0:8:24.03:0,24,274	0/0:13,0:13:33.10:0,33,399	0/0:13,0:13:39.12:0,39,471	0/0:26,0:25:69.20:0,69,822	0/0:17,0:17:48.15:0,48,580
chr10	78858541	.	T	TA	5791.70	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-0.947;DP=546;FS=1.638;HRun=10;HaplotypeScore=94.6227;InbreedingCoeff=0.9440;MQ=71.84;MQ0=1;MQRankSum=-3.466;QD=20.76;ReadPosRankSum=-2.948;VQSLOD=4.0847;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:65.81:0,66,542	1/1:5,5:10:20.99:202,21,0	0/0:21,0:17:29.40:0,29,226	0/0:18,0:13:16.65:0,17,116	1/1:12,16:28:66.02:646,66,0	1/1:5,13:18:31.36:349,31,0	1/1:0,13:13:36.09:384,36,0	1/1:8,23:31:68.74:694,69,0	0/0:1,0:15:20.36:0,20,59	1/1:13,8:20:12.27:304,12,0	1/1:13,15:28:34.39:566,34,0	0/0:20,0:20:56.90:0,57,462	0/0:19,0:19:46.16:0,46,367	0/0:18,1:19:12.27:0,12,291	1/1:9,17:26:60.13:625,60,0	1/1:5,8:15:3.76:309,4,0	0/0:26,0:26:68.90:0,69,566	0/0:22,0:22:59.93:0,60,493	1/1:8,7:16:35.07:354,35,0	1/1:13,6:19:33.14:343,33,0	1/1:1,3:4:9.02:96,9,0	0/0:18,1:19:6.71:0,7,263	0/0:16,0:16:38.16:0,38,302	0/0:12,0:12:35.96:0,36,295	1/1:16,7:23:37.71:329,38,0	0/0:5,0:20:32.58:0,33,94	1/1:10,17:27:19.82:591,20,0	0/0:2,0:9:14.25:0,14,41
chr10	78858560	.	T	TAAC	8764.54	PASS	AB=0.769;AC=25;AF=0.446;AN=56;BaseQRankSum=-0.139;DP=528;FS=4.184;HRun=0;HaplotypeScore=95.4950;InbreedingCoeff=0.9088;MQ=59.50;MQ0=4;MQRankSum=-5.355;QD=35.20;ReadPosRankSum=-2.083;VQSLOD=4.9749;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,14:28:42.14:801,42,0	1/1:3,7:11:24.08:474,24,0	0/0:27,0:16:29.63:0,30,316	0/0:21,0:12:15.02:0,15,186	1/1:10,13:23:9.44:864,9,0	0/0:16,0:16:30.10:0,30,420	0/0:16,0:16:27.09:0,27,378	1/1:19,9:28:39.13:718,39,0	0/0:15,0:15:27.06:0,27,342	1/1:7,16:22:54.19:1071,54,0	1/1:15,9:24:42.14:802,42,0	0/0:19,0:19:36.09:0,36,468	0/0:14,0:14:33.11:0,33,461	0/0:16,0:16:36.12:0,36,504	1/1:7,18:26:60.17:1114,60,0	0/1:7,3:10:62.90:230,0,63	0/0:24,0:24:57.19:0,57,797	0/0:25,0:25:44.62:0,45,602	1/1:6,8:14:27.04:491,27,0	1/1:4,6:10:18.03:320,18,0	1/1:3,4:7:12.04:240,12,0	0/0:21,0:21:54.17:0,54,737	0/0:13,0:13:27.09:0,27,378	0/0:17,0:17:14.43:0,14,516	1/1:5,11:16:24.08:478,24,0	0/0:20,0:20:45.09:0,45,592	1/1:12,17:29:62.92:1162,63,0	0/0:15,0:15:39.13:0,39,546
chr10	78860203	.	TC	T	11939.11	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=10.277;DP=647;FS=5.020;HRun=9;HaplotypeScore=62.9448;InbreedingCoeff=0.9982;MQ=78.22;MQ0=0;MQRankSum=-2.489;QD=23.97;ReadPosRankSum=1.141;VQSLOD=5.8438;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.14:0,57,635	1/1:2,7:9:21:192,21,0	0/0:15,0:16:34.69:0,35,376	0/0:16,0:16:28.66:0,29,311	1/1:3,28:31:80.90:720,81,0	1/1:3,32:35:81.03:741,81,0	1/1:1,19:20:60.03:549,60,0	1/1:3,21:24:62.36:541,62,0	1/1:3,20:23:57.03:522,57,0	1/1:0,26:26:78.01:704,78,0	1/1:0,20:20:57.03:520,57,0	1/1:0,17:17:51.03:467,51,0	1/1:0,34:34:87.05:796,87,0	1/1:1,19:20:51.03:467,51,0	1/1:3,18:21:48.02:439,48,0	1/1:1,21:22:60.03:549,60,0	0/0:30,0:30:84.25:0,84,969	0/0:30,0:30:77.04:0,77,870	1/1:1,10:11:30.01:274,30,0	1/1:1,29:30:84.05:768,84,0	1/1:4,22:26:63.03:577,63,0	1/1:3,20:23:59.94:532,60,0	1/1:2,20:22:60.03:549,60,0	1/1:1,34:35:86.89:796,87,0	1/1:1,28:29:78.04:714,78,0	0/0:25,1:26:44.83:0,45,762	1/1:0,20:20:57.03:522,57,0	0/0:10,0:10:21.06:0,21,242
chr10	78860981	.	AT	A	11129.77	PASS	AB=0.938;AC=50;AF=0.893;AN=56;BaseQRankSum=0.021;DP=651;FS=2.414;HRun=10;HaplotypeScore=78.0344;InbreedingCoeff=0.6375;MQ=81.89;MQ0=0;MQRankSum=-2.257;QD=17.98;ReadPosRankSum=3.925;VQSLOD=5.5758;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:22:38.70:114,39,0	1/1:0,7:7:14.86:130,15,0	0/1:22,2:24:24.27:24,0,311	0/1:19,1:20:11.54:12,0,235	1/1:5,29:34:83.96:728,84,0	1/1:5,20:24:50.97:443,51,0	1/1:2,12:14:29.99:260,30,0	1/1:6,25:31:74.93:642,75,0	1/1:1,13:14:35.99:313,36,0	1/1:4,19:23:56.98:495,57,0	1/1:5,18:23:44.96:390,45,0	1/1:3,21:24:53.98:469,54,0	1/1:2,21:23:56.99:495,57,0	1/1:1,24:25:71.98:625,72,0	1/1:2,26:28:71.98:625,72,0	1/1:4,17:21:50.98:443,51,0	0/0:16,0:16:48.11:0,48,522	0/0:16,0:16:45.07:0,45,475	1/1:7,23:30:65.96:573,66,0	1/1:1,16:17:47.99:417,48,0	1/1:2,24:26:65.98:573,66,0	1/1:2,27:29:74.98:651,75,0	1/1:5,23:28:32.80:514,33,0	1/1:2,20:22:59.98:521,60,0	1/1:2,22:24:65.97:573,66,0	1/1:2,2:32:58.95:208,59,0	1/1:4,34:38:95.96:833,96,0	1/1:5,0:15:20.37:60,20,0
chr10	78862267	.	GATATATAT	G	4435.98	PASS	AC=42;AF=0.875;AN=48;BaseQRankSum=2.940;DP=278;FS=27.359;HRun=0;HaplotypeScore=87.3493;InbreedingCoeff=0.5356;MQ=77.15;MQ0=5;MQRankSum=-4.546;QD=25.49;ReadPosRankSum=-1.509;VQSLOD=2.4552;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,4:10:9.02:121,9,0	./.	1/1:10,0:9:0.18:1,0,0	0/0:39,0:23:0.28:0,0,52	./.	1/1:14,0:14:36.12:545,36,0	./.	1/1:28,1:29:50.69:981,51,0	1/1:11,0:11:27.06:389,27,0	1/1:0,2:2:5.98:72,6,0	1/1:5,7:12:3.01:32,3,0	1/1:5,0:5:3.01:49,3,0	1/1:4,3:7:9.03:131,9,0	1/1:5,1:6:9.03:160,9,0	1/1:6,0:6:9.02:161,9,0	1/1:4,0:4:6.02:87,6,0	0/0:27,0:30:60.21:0,60,2271	0/0:16,0:19:51.17:0,51,1781	1/1:5,0:5:9.03:141,9,0	1/1:7,1:8:12.04:143,12,0	1/1:5,0:5:9.02:124,9,0	1/1:7,0:7:6.02:98,6,0	1/1:5,1:6:9.03:132,9,0	./.	1/1:3,0:3:9.03:109,9,0	1/1:6,6:13:27.09:633,27,0	1/1:8,0:7:15.05:257,15,0	1/1:1,1:2:3.01:72,3,0
chr10	78862284	.	ATATCTG	A	2748.25	PASS	AB=1.000;AC=30;AF=0.789;AN=38;BaseQRankSum=6.614;DP=250;FS=19.388;HRun=0;HaplotypeScore=72.1167;InbreedingCoeff=0.4407;MQ=84.49;MQ0=10;MQRankSum=-7.540;QD=17.39;ReadPosRankSum=-3.406;VQSLOD=0.5782;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:25,0:13:7.95:0,8,33	0/1:67,0:24:22.36:22,0,27	./.	1/1:3,10:13:33.11:554,33,0	./.	1/1:8,10:17:41.32:776,41,0	1/1:0,5:5:15.05:299,15,0	./.	1/1:7,1:8:3.01:34,3,0	./.	1/1:3,2:5:9.03:157,9,0	1/1:2,2:4:6.02:112,6,0	1/1:2,1:3:6.02:85,6,0	1/1:0,1:1:3.01:36,3,0	0/0:24,0:24:72.17:0,72,2074	0/0:22,0:21:51.17:0,51,1567	1/1:5,1:6:9.35:100,9,0	1/1:2,4:6:12.04:156,12,0	./.	./.	1/1:2,1:3:3.01:34,3,0	./.	1/1:1,3:4:9.03:135,9,0	1/1:7,0:7:18.87:166,19,0	1/1:2,4:6:9.03:187,9,0	0/1:2,0:2:30.02:30,0,40
chr10	78862290	.	G	GTA	1269.28	PASS	AB=1.000;AC=27;AF=0.643;AN=42;BaseQRankSum=5.205;DP=246;FS=8.205;HRun=0;HaplotypeScore=74.4859;InbreedingCoeff=0.5313;MQ=87.63;MQ0=10;MQRankSum=-6.789;QD=8.14;ReadPosRankSum=-3.266;VQSLOD=1.5697;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:8:0:0,0,0	./.	0/0:27,0:15:4.55:0,5,54	0/1:69,0:25:12.64:24,0,13	./.	1/1:11,0:11:21.15:245,21,0	./.	1/1:14,6:18:45.10:535,45,0	1/1:5,0:5:12.01:126,12,0	./.	0/1:8,0:8:0:0,0,0	./.	1/1:5,0:5:6.48:72,6,0	1/1:3,1:4:5.48:24,5,0	1/1:2,0:2:2.74:12,3,0	1/1:1,0:1:0.47:1,0,0	0/0:25,0:25:72.13:0,72,873	0/0:23,0:22:51.14:0,51,640	1/1:2,2:4:12.04:161,12,0	1/1:5,0:5:3.95:49,4,0	./.	./.	0/1:2,0:2:0:0,0,0	0/1:4,0:4:0:0,0,0	1/1:3,1:4:6.49:95,6,0	0/0:7,0:7:12.03:0,12,144	1/1:4,0:4:8.72:59,9,0	0/0:2,0:2:3.01:0,3,37
chr10	78862310	.	C	CAT	397.98	PASS	AB=0.838;AC=20;AF=0.526;AN=38;BaseQRankSum=2.504;DP=226;FS=0.000;HRun=0;HaplotypeScore=71.1261;InbreedingCoeff=0.5171;MQ=83.48;MQ0=10;MQRankSum=-3.691;QD=4.97;ReadPosRankSum=-2.612;VQSLOD=1.7108;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:11:8.59:0,9,43	./.	0/1:23,0:16:0:0,0,0	0/0:56,0:19:3.11:0,3,18	./.	0/0:11,0:10:14.84:0,15,101	0/0:3,0:3:5.77:0,6,34	1/1:28,0:26:27.24:119,27,0	0/0:5,0:5:11.87:0,12,81	./.	./.	1/1:1,0:1:1.25:3,1,0	1/1:2,0:2:1.72:4,2,0	0/0:3,0:3:2.80:0,3,13	./.	./.	0/0:25,0:25:72.12:0,72,830	0/0:22,0:22:54.11:0,54,621	1/1:4,0:4:9.35:42,9,0	1/1:3,0:3:0.47:1,0,0	1/1:1,0:1:2.50:9,2,0	./.	1/1:2,0:2:1.55:4,2,0	./.	1/1:3,0:3:2.60:5,3,0	0/1:3,2:5:28.40:90,0,28	./.	1/1:0,6:6:15.05:247,15,0
chr10	78862322	.	TAG	T	1605.37	PASS	AB=0.600;AC=27;AF=0.643;AN=42;BaseQRankSum=3.538;DP=215;FS=7.116;HRun=0;HaplotypeScore=56.1018;InbreedingCoeff=0.6181;MQ=86.93;MQ0=6;MQRankSum=-3.834;QD=19.11;ReadPosRankSum=-2.370;VQSLOD=2.4729;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:9.43:0,9,70	./.	0/0:15,0:11:7.61:0,8,68	0/0:36,0:18:17.59:0,18,124	./.	1/1:2,10:11:18:205,18,0	0/1:1,2:3:15.75:33,0,16	1/1:6,25:29:71.96:748,72,0	1/1:1,5:6:12:135,12,0	./.	./.	1/1:0,1:1:3.01:38,3,0	1/1:1,2:3:9:97,9,0	1/1:1,1:3:2.84:14,3,0	./.	1/1:2,0:2:2.99:24,3,0	0/0:27,0:27:63.19:0,63,1033	0/0:22,0:22:51.13:0,51,799	1/1:5,3:8:20.96:203,21,0	1/1:3,1:4:5.97:56,6,0	1/1:0,2:2:3.01:39,3,0	./.	1/1:1,1:2:3.01:38,3,0	1/1:0,4:4:2.99:23,3,0	1/1:0,3:3:9.03:113,9,0	0/0:3,0:3:9.03:0,9,119	./.	0/0:7,0:7:18.04:0,18,194
chr10	78862422	.	T	TC	9850.48	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-4.137;DP=304;FS=10.569;HRun=1;HaplotypeScore=37.6194;InbreedingCoeff=0.9244;MQ=59.10;MQ0=1;MQRankSum=-3.701;QD=43.78;ReadPosRankSum=1.619;VQSLOD=3.9954;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:26:72.25:1149,72,0	1/1:0,4:4:12.04:191,12,0	0/0:19,0:10:29.89:0,30,390	0/0:22,0:16:22.12:0,22,423	1/1:0,13:13:36.12:574,36,0	1/1:0,14:14:39.13:611,39,0	1/1:1,11:12:30.10:479,30,0	1/1:0,6:6:17.98:232,18,0	1/1:0,7:7:21.07:335,21,0	1/1:0,8:8:24.07:360,24,0	1/1:0,6:6:18.06:287,18,0	1/1:0,8:8:24.08:375,24,0	1/1:0,6:6:18.06:287,18,0	1/1:1,4:5:9.03:143,9,0	1/1:1,6:7:21.07:330,21,0	1/1:1,10:11:30.10:478,30,0	0/0:26,0:26:72.17:0,72,949	0/0:12,0:12:33.11:0,33,461	1/1:1,9:9:27.09:432,27,0	1/1:0,4:4:12.04:192,12,0	1/1:0,18:17:51.17:815,51,0	1/1:1,6:7:18.06:286,18,0	1/1:1,6:7:18.06:287,18,0	1/1:0,12:12:33.11:527,33,0	1/1:1,2:3:6.02:96,6,0	1/1:0,11:11:33.11:524,33,0	1/1:0,11:11:30.10:478,30,0	1/1:0,8:8:24.08:384,24,0
chr10	78864949	.	ACCCTCATACT	A	1585.98	PASS	AB=0.556;AC=3;AF=0.054;AN=56;BaseQRankSum=7.172;DP=716;FS=1.868;HRun=0;HaplotypeScore=207.6816;InbreedingCoeff=0.6163;MQ=84.36;MQ0=0;MQRankSum=-5.444;QD=61.00;ReadPosRankSum=1.001;VQSLOD=3.5526;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,166,8306	0/0:6,0:6:18.06:0,18,940	0/0:41,0:41:90.27:0,90,3699	0/0:31,0:31:78.11:0,78,3530	0/0:21,0:21:60.21:0,60,3068	0/0:30,0:30:78.27:0,78,3739	0/0:27,0:27:72.23:0,72,3404	0/0:35,0:35:84.29:0,84,3835	0/0:32,0:32:84.29:0,84,4338	0/0:34,0:34:99:0,99,4869	0/0:18,0:18:51.18:0,51,2540	0/0:33,0:33:93.32:0,93,4711	0/0:25,0:25:66.21:0,66,3031	0/0:27,0:27:75.26:0,75,3815	0/0:26,0:26:78.27:0,78,3829	0/0:14,0:14:42.14:0,42,2082	0/0:30,0:30:90.31:0,90,4674	0/0:31,0:31:90.31:0,90,4538	0/0:24,0:24:72.24:0,72,3259	0/0:15,0:15:42.13:0,42,1963	0/0:24,0:24:66.23:0,66,3315	0/0:16,0:16:36.12:0,36,1859	0/0:17,0:17:45.14:0,45,2200	0/0:27,0:27:69.24:0,69,3407	0/0:22,0:21:57.20:0,57,2975	0/1:4,16:20:99:1340,0,105	0/0:25,0:25:72.23:0,72,3440	1/1:2,4:6:12.04:345,12,0
chr10	78865559	.	CCTTT	C	9338.69	PASS	AB=0.896;AC=48;AF=0.857;AN=56;BaseQRankSum=2.065;DP=497;FS=0.000;HRun=0;HaplotypeScore=144.7345;InbreedingCoeff=0.6982;MQ=53.96;MQ0=0;MQRankSum=-4.513;QD=21.42;ReadPosRankSum=0.925;VQSLOD=4.4653;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,3:28:53.57:496,54,0	1/1:4,2:6:18:185,18,0	0/0:16,0:9:24.05:0,24,357	0/0:10,0:8:14.82:0,15,131	1/1:20,4:24:41.28:465,41,0	1/1:7,9:16:19.72:510,20,0	1/1:23,0:24:40.60:635,41,0	1/1:21,0:21:48.53:375,49,0	0/1:25,0:25:57.66:58,0,656	1/1:8,8:16:42.10:578,42,0	1/1:0,25:25:62.03:751,62,0	1/1:14,9:23:64.39:646,64,0	1/1:6,7:13:30.02:353,30,0	1/1:11,7:18:44.84:462,45,0	1/1:0,20:20:12.04:205,12,0	1/1:1,19:20:20.89:351,21,0	0/0:35,0:35:86.34:0,86,1864	1/1:13,3:16:8.82:266,9,0	1/1:10,4:14:27.52:337,28,0	1/1:8,4:12:26.96:355,27,0	1/1:15,0:15:32.77:301,33,0	1/1:7,3:10:25.99:245,26,0	1/1:7,4:11:29.76:275,30,0	1/1:12,1:14:23.07:196,23,0	1/1:5,15:20:27.09:455,27,0	0/1:14,5:19:4.32:462,0,4	1/1:0,20:20:11.79:203,12,0	1/1:4,2:6:17.93:174,18,0
chr10	78865566	.	TC	T	453.52	PASS	AB=0.858;AC=8;AF=0.143;AN=56;BaseQRankSum=8.332;DP=498;FS=0.000;HRun=2;HaplotypeScore=157.5484;InbreedingCoeff=0.0367;MQ=50.79;MQ0=0;MQRankSum=-7.242;QD=4.45;ReadPosRankSum=4.850;VQSLOD=0.4936;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:68.97:0,69,871	0/0:6,0:6:12.51:0,13,171	0/0:13,0:6:18.05:0,18,247	0/0:5,0:3:9.03:0,9,125	0/0:23,0:23:62.60:0,63,734	0/0:17,0:17:29.26:0,29,303	0/0:24,0:24:45.50:0,45,829	0/0:23,0:23:65.09:0,65,838	0/0:31,0:31:93.30:0,93,1342	0/0:17,0:17:48.98:0,49,480	0/0:25,0:25:67.58:0,68,634	0/1:20,6:26:99:171,0,333	0/1:14,0:14:99:108,0,103	0/1:16,5:21:99:108,0,323	0/0:20,0:20:11.55:0,12,62	0/0:20,0:20:23.32:0,23,137	0/0:31,0:31:54.46:0,54,1140	0/0:17,1:18:50.87:0,51,628	0/0:15,0:15:40.48:0,40,394	0/0:14,0:14:35.60:0,36,423	0/0:13,0:13:36.07:0,36,477	0/1:11,0:11:44.40:44,0,232	0/1:10,3:13:99:122,0,219	0/1:9,6:15:19.73:20,0,155	0/0:17,0:17:32.10:0,32,230	0/0:17,0:17:16.06:0,16,278	0/0:22,0:21:17.63:0,18,128	1/1:2,0:2:4.07:12,4,0
chr10	78865575	.	CCTTT	C	9545.28	PASS	AB=0.796;AC=48;AF=0.857;AN=56;BaseQRankSum=1.362;DP=491;FS=0.528;HRun=0;HaplotypeScore=157.3464;InbreedingCoeff=0.5982;MQ=49.83;MQ0=0;MQRankSum=-3.174;QD=21.31;ReadPosRankSum=-2.369;VQSLOD=4.3519;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:36.40:369,36,0	1/1:5,2:7:20.99:209,21,0	0/0:10,0:5:5.18:0,5,78	0/0:5,0:3:5.95:0,6,42	1/1:26,0:26:52.19:534,52,0	1/1:9,9:18:20.19:510,20,0	1/1:23,0:24:40.13:643,40,0	1/1:20,0:20:36.29:284,36,0	0/1:31,0:31:99:155,0,639	1/1:18,0:18:47.88:610,48,0	1/1:23,0:23:56.67:718,57,0	1/1:14,9:23:58.10:622,58,0	1/1:11,7:18:41.92:456,42,0	1/1:14,7:21:47.51:477,48,0	1/1:19,0:19:23.99:300,24,0	1/1:20,0:20:29.80:426,30,0	0/0:28,0:28:58.37:0,58,1550	1/1:16,0:16:22.77:293,23,0	1/1:17,0:17:36.34:379,36,0	1/1:16,0:16:41.93:474,42,0	1/1:13,0:13:32.75:295,33,0	1/1:9,3:12:32.88:318,33,0	1/1:11,4:15:35.96:360,36,0	1/1:12,2:14:22.73:194,23,0	1/1:18,0:18:33.57:510,34,0	0/1:5,0:16:42.88:134,0,43	1/1:19,0:18:14.12:220,14,0	1/1:0,0:2:6.01:57,6,0
chr10	78865591	.	CCTTCCTTT	C	5270.86	PASS	AB=0.970;AC=30;AF=0.536;AN=56;BaseQRankSum=-2.202;DP=484;FS=2.921;HRun=0;HaplotypeScore=203.9023;InbreedingCoeff=-0.3155;MQ=55.97;MQ0=0;MQRankSum=2.442;QD=12.58;ReadPosRankSum=-2.903;VQSLOD=3.7222;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:99:107,0,217	1/1:5,0:5:15.01:232,15,0	0/0:9,0:9:17.10:0,17,263	0/0:9,0:8:20.79:0,21,340	0/1:18,0:18:51.92:52,0,174	0/1:18,0:18:23.76:748,0,24	0/1:22,0:22:31.90:295,0,32	0/1:18,0:18:61.34:112,0,61	0/1:30,0:30:29.22:29,0,1699	0/1:17,0:17:74.03:74,0,172	0/1:22,0:22:40.78:41,0,196	0/1:10,8:18:24.69:621,0,25	1/1:11,7:18:37.36:592,37,0	1/1:9,7:16:7.46:552,7,0	0/1:20,0:20:53.76:99,0,54	0/1:21,0:21:56.34:56,0,104	0/0:29,0:29:81.19:0,81,2613	0/1:16,0:16:6.08:6,0,342	0/1:18,0:18:58.51:59,0,103	0/1:20,0:20:99:140,0,116	0/1:13,0:13:62.91:63,0,125	1/1:8,3:11:16.07:265,16,0	0/1:9,4:13:17.83:357,0,18	1/1:13,1:14:13.94:174,14,0	0/0:18,0:18:8.97:0,9,235	0/1:16,0:16:99:355,0,179	0/1:26,0:25:57.51:102,0,58	1/1:4,0:4:6.02:139,6,0
chr10	78865822	.	A	ATTT	12795.05	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-2.265;DP=534;FS=3.293;HRun=5;HaplotypeScore=133.9218;InbreedingCoeff=0.9834;MQ=63.56;MQ0=0;MQRankSum=-4.958;QD=29.48;ReadPosRankSum=0.600;VQSLOD=1.9072;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:30,1:31:74.92:921,75,0	1/1:7,0:7:14.94:152,15,0	0/0:18,0:15:38.96:0,39,518	0/0:9,0:7:10.14:0,10,138	1/1:22,1:23:56.75:779,57,0	1/1:20,0:20:50.84:532,51,0	1/1:18,1:19:53.76:605,54,0	1/1:33,2:35:80.79:868,81,0	1/1:15,2:17:41.94:543,42,0	1/1:9,0:9:20.55:291,21,0	1/1:17,0:17:44.61:573,45,0	1/1:11,0:11:32.97:441,33,0	1/1:13,0:13:35.87:418,36,0	1/1:14,0:14:35.75:393,36,0	1/1:19,1:20:44.84:613,45,0	1/1:21,0:21:56.93:721,57,0	0/0:31,0:31:87.29:0,87,1249	1/1:13,1:14:30.05:434,30,0	1/1:14,1:15:23.99:278,24,0	1/1:24,0:24:62.83:816,63,0	1/1:18,0:18:35.85:364,36,0	1/1:21,0:21:50.90:631,51,0	1/1:23,1:24:59.56:627,60,0	1/1:14,0:14:29.87:339,30,0	1/1:17,0:17:50.64:539,51,0	0/0:28,0:28:56.43:0,56,194	1/1:29,1:30:77.83:917,78,0	0/0:14,0:14:32.86:0,33,112
chr10	78865827	.	TA	T	847.44	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-7.395;DP=496;FS=18.955;HRun=11;HaplotypeScore=152.8959;InbreedingCoeff=0.6103;MQ=65.33;MQ0=0;MQRankSum=-3.605;QD=16.62;ReadPosRankSum=-8.188;VQSLOD=0.2389;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:28.28:0,28,147	0/0:5,0:5:13.50:0,13,62	0/0:19,0:16:13.82:0,14,281	0/1:9,0:7:16.08:16,0,72	0/0:19,0:19:29.79:0,30,139	0/0:19,0:19:6.15:0,6,110	0/0:19,0:20:12:0,12,132	0/0:31,0:32:51.04:0,51,293	0/0:14,0:14:28.49:0,28,123	0/0:8,0:9:5.11:0,5,34	0/0:17,0:17:11.18:0,11,88	0/0:11,0:12:6.57:0,7,50	0/0:11,0:12:21.52:0,22,107	0/0:14,0:14:23.29:0,23,130	0/0:16,0:18:21.50:0,22,113	0/0:21,0:21:16.87:0,17,154	0/0:29,1:30:31.49:0,31,712	0/0:11,0:11:12.86:0,13,51	0/0:10,0:12:8.60:0,9,72	0/0:21,0:22:18.84:0,19,95	0/0:12,0:13:10.63:0,11,57	0/0:18,0:19:21.65:0,22,111	0/0:20,0:21:23.54:0,24,175	0/0:14,0:14:21.06:0,21,94	0/0:17,0:17:33.56:0,34,160	1/1:0,28:28:82.27:641,82,0	0/0:27,0:27:53.12:0,53,244	1/1:1,13:14:38.94:319,39,0
chr10	78866047	.	GC	G	20263.30	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=13.171;DP=675;FS=0.440;HRun=2;HaplotypeScore=244.9445;InbreedingCoeff=0.9969;MQ=83.38;MQ0=2;MQRankSum=-11.087;QD=34.11;ReadPosRankSum=5.257;VQSLOD=3.9189;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:87.28:1129,87,0	1/1:0,7:6:18.06:234,18,0	0/0:27,0:27:75.20:0,75,1082	0/0:25,0:25:72.14:0,72,971	1/1:0,27:27:63.20:817,63,0	1/1:0,23:23:66.21:857,66,0	1/1:1,22:23:60.20:778,60,0	1/1:0,29:29:84.26:1074,84,0	1/1:0,23:21:63.20:817,63,0	1/1:0,27:27:81.26:1050,81,0	1/1:1,20:21:45.14:584,45,0	1/1:1,20:21:48.16:622,48,0	1/1:0,23:23:69.22:895,69,0	1/1:1,26:27:75.24:973,75,0	1/1:1,40:41:99:1363,105,0	1/1:0,24:24:66.21:856,66,0	0/0:29,0:29:87.27:0,87,1278	1/1:0,19:18:48.16:623,48,0	1/1:2,14:16:42.05:507,42,0	1/1:0,22:22:66.17:837,66,0	1/1:0,32:31:90.29:1168,90,0	1/1:0,19:19:48.16:623,48,0	1/1:0,22:22:54.18:700,54,0	1/1:0,29:28:75.18:954,75,0	1/1:1,18:19:42.14:545,42,0	1/1:0,23:23:66.19:841,66,0	1/1:0,27:27:81.26:1047,81,0	1/1:0,13:13:30.05:370,30,0
chr10	78867354	.	T	TA	20220.48	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=15.417;DP=630;FS=14.049;HRun=0;HaplotypeScore=155.4472;InbreedingCoeff=0.9992;MQ=91.93;MQ0=0;MQRankSum=-9.184;QD=41.69;ReadPosRankSum=1.923;VQSLOD=2.5295;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:54.18:831,54,0	1/1:0,10:10:26.76:393,27,0	0/0:31,0:31:87.29:0,87,1200	0/0:31,0:31:78.17:0,78,1021	1/1:2,19:21:56.35:736,56,0	1/1:4,19:23:60.09:884,60,0	1/1:1,25:26:72.03:1105,72,0	1/1:3,14:17:48.09:713,48,0	1/1:0,16:16:48.16:766,48,0	1/1:1,25:26:78.27:1233,78,0	1/1:1,18:19:51:764,51,0	1/1:1,30:31:87.30:1381,87,0	1/1:1,20:21:63.04:935,63,0	1/1:1,18:19:54.04:791,54,0	1/1:2,26:28:78:1173,78,0	1/1:2,16:18:54.05:813,54,0	0/0:34,0:34:99:0,102,1426	1/1:0,20:20:60.10:925,60,0	1/1:3,10:13:39.08:529,39,0	1/1:1,21:22:59.85:858,60,0	1/1:1,17:18:48.03:731,48,0	1/1:4,19:23:59.43:788,59,0	1/1:2,24:26:77.31:1009,77,0	1/1:2,10:12:23.87:347,24,0	1/1:1,17:18:50.96:749,51,0	0/0:35,1:36:51.38:0,51,1287	1/1:2,37:39:99:1769,114,0	0/0:13,0:13:39.11:0,39,527
chr10	78867864	.	AG	A	4476.66	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.459;DP=615;FS=0.378;HRun=2;HaplotypeScore=90.2869;InbreedingCoeff=0.9989;MQ=73.80;MQ0=0;MQRankSum=-0.528;QD=34.70;ReadPosRankSum=3.489;VQSLOD=5.1462;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1505	0/0:8,0:8:24.08:0,24,360	0/0:24,0:21:22.61:0,23,767	0/0:29,0:28:75.24:0,75,1054	0/0:29,0:29:87.29:0,87,1293	0/0:23,0:23:66.22:0,66,986	0/0:21,0:21:60.20:0,60,889	0/0:25,0:25:75.25:0,75,1114	0/0:14,0:14:42.14:0,42,625	0/0:20,0:20:60.20:0,60,881	0/0:18,0:18:54.16:0,54,755	1/1:0,24:24:60.20:779,60,0	1/1:0,17:17:47.86:623,48,0	1/1:0,23:23:66.21:856,66,0	0/0:27,0:27:81.26:0,81,1189	0/0:26,0:26:78.26:0,78,1163	0/0:19,0:19:57.19:0,57,850	0/0:15,0:15:36.05:0,36,539	0/0:15,0:14:42.14:0,42,630	0/0:34,0:34:99:0,102,1491	0/0:28,0:28:84.28:0,84,1258	1/1:0,21:21:60.19:779,60,0	1/1:0,18:18:54.18:701,54,0	1/1:2,24:25:57.19:739,57,0	0/0:19,0:19:57.18:0,57,813	0/0:23,0:23:63.21:0,63,935	0/0:24,0:24:72.22:0,72,1038	0/0:10,0:10:30.10:0,30,449
chr10	78868141	.	AG	A	1451.90	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.000;DP=691;FS=8.451;HRun=1;HaplotypeScore=62.2807;InbreedingCoeff=0.9454;MQ=85.08;MQ0=0;MQRankSum=-3.541;QD=33.77;ReadPosRankSum=1.614;VQSLOD=3.0665;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1678	0/0:9,0:9:27.09:0,27,425	0/0:22,0:22:63.20:0,63,979	0/0:19,0:20:59.84:0,60,894	0/0:20,0:20:60.20:0,60,957	0/0:19,0:19:57.13:0,57,881	0/0:21,0:21:63.19:0,63,980	0/0:45,0:45:99:0,132,2048	0/0:28,0:28:78.25:0,78,1213	0/0:41,0:41:99:0,123,1944	0/0:21,0:21:63.21:0,63,1003	0/0:26,0:26:78.25:0,78,1220	0/0:20,0:20:60.20:0,60,955	0/0:29,0:29:87.27:0,87,1364	0/0:27,0:27:78.27:0,78,1244	0/0:32,0:32:96.33:0,96,1530	0/0:26,0:26:78.25:0,78,1217	0/0:21,0:21:63.18:0,63,980	0/0:24,0:24:72.23:0,72,1119	0/0:22,0:22:66.23:0,66,1052	0/0:27,0:27:78.27:0,78,1244	0/0:20,0:20:60.19:0,60,932	0/0:12,0:12:36.12:0,36,572	0/0:25,0:25:75.22:0,75,1145	0/0:27,0:27:78.24:0,78,1198	1/1:2,32:34:6.36:1228,6,0	0/0:29,0:28:87.30:0,87,1384	1/1:0,9:9:24.08:335,24,0
chr10	78868217	.	A	AAGGC	1645.33	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.920;DP=659;FS=2.874;HRun=0;HaplotypeScore=137.4085;InbreedingCoeff=0.9977;MQ=81.79;MQ0=0;MQRankSum=-3.858;QD=60.94;ReadPosRankSum=0.187;VQSLOD=5.4696;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.30:0,93,1634	0/0:8,0:8:24.08:0,24,437	0/0:25,0:25:56.75:0,57,931	0/0:24,0:24:63.16:0,63,1066	0/0:28,0:28:78.25:0,78,1395	0/0:25,0:25:66.22:0,66,1184	0/0:25,0:25:69.18:0,69,1143	0/0:22,0:22:60.19:0,60,1021	1/1:3,24:27:66.23:1740,66,0	0/0:30,0:30:87.27:0,87,1557	0/0:20,0:20:57.19:0,57,1026	0/0:25,0:25:72.25:0,72,1320	0/0:24,0:24:69.24:0,69,1243	0/0:22,0:22:60.21:0,60,1095	0/0:24,0:24:63.20:0,63,1102	0/0:31,0:31:87.30:0,87,1593	0/0:23,0:23:66.23:0,66,1199	0/0:24,0:24:69.19:0,69,1234	0/0:16,0:16:39.12:0,39,655	0/0:23,0:23:69.24:0,69,1270	0/0:21,0:21:60.18:0,60,1043	0/0:27,0:27:78.25:0,78,1403	0/0:12,0:12:33.11:0,33,605	0/0:25,0:25:75.20:0,75,1292	0/0:24,0:24:72.23:0,72,1293	0/0:28,0:28:69.23:0,69,1237	0/0:27,0:27:75.26:0,75,1359	0/0:17,0:17:48.16:0,48,855
chr10	78868918	.	A	AC	5934.90	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-8.008;DP=555;FS=5.172;HRun=8;HaplotypeScore=76.6509;InbreedingCoeff=0.8228;MQ=84.08;MQ0=0;MQRankSum=-3.252;QD=13.25;ReadPosRankSum=1.679;VQSLOD=4.6348;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:31:54.16:623,54,0	1/1:1,0:4:5.68:29,6,0	0/0:20,0:20:47.97:0,48,426	0/0:17,0:17:10.16:0,10,234	1/1:6,1:11:8.34:48,8,0	1/1:3,1:14:8.56:43,9,0	1/1:4,2:21:11.50:64,11,0	1/1:17,0:25:12.48:69,12,0	1/1:2,22:24:50.98:588,51,0	1/1:7,0:12:9.41:66,9,0	1/1:7,0:16:11.40:58,11,0	1/1:1,22:23:45.09:519,45,0	1/1:6,37:43:65.81:1011,66,0	1/1:3,26:29:66.20:762,66,0	1/1:7,2:20:11.51:67,12,0	1/1:7,1:22:8.52:43,9,0	0/0:30,0:30:77.99:0,78,702	1/1:6,0:11:5.44:25,5,0	1/1:11,0:11:11.80:75,12,0	1/1:3,0:7:8.67:49,9,0	1/1:8,2:25:8.52:43,9,0	1/1:5,22:27:54.16:623,54,0	1/1:0,12:12:36.11:415,36,0	1/1:2,21:23:48.14:554,48,0	1/1:5,0:15:14.20:72,14,0	0/0:25,0:25:63.02:0,63,576	1/1:8,1:22:16.94:88,17,0	0/0:15,0:15:42.02:0,42,384
chr10	78869636	.	CTG	C	2162.56	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.292;DP=806;FS=5.326;HRun=0;HaplotypeScore=91.1120;InbreedingCoeff=1.0000;MQ=83.67;MQ0=0;MQRankSum=-3.013;QD=46.01;ReadPosRankSum=2.521;VQSLOD=5.2301;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,2590	0/0:14,0:14:42.12:0,42,800	0/0:23,0:23:69.24:0,69,1398	0/0:30,0:30:84.21:0,84,1557	0/0:28,0:28:84.27:0,84,1654	0/0:29,0:29:87.30:0,87,1768	0/0:20,0:20:60.21:0,60,1177	0/0:32,0:32:96.33:0,96,1931	0/0:33,0:33:99:0,99,1964	0/0:32,0:32:96.32:0,96,1913	0/0:23,0:23:69.24:0,69,1402	0/0:38,0:38:99:0,114,2270	0/0:21,0:21:63.22:0,63,1226	0/0:32,0:32:96.31:0,96,1886	0/0:38,0:38:99:0,114,2315	0/0:37,0:37:99:0,111,2196	0/0:32,0:32:96.33:0,96,1904	0/0:26,0:26:78.25:0,78,1527	0/0:22,0:22:66.22:0,66,1280	0/0:24,0:24:72.23:0,72,1427	0/0:41,0:41:99:0,123,2451	0/0:26,0:26:78.27:0,78,1573	0/0:27,0:27:81.26:0,81,1560	0/0:26,0:26:78.27:0,78,1584	0/0:30,0:30:90.31:0,90,1808	1/1:0,34:34:99:1649,102,0	0/0:32,0:32:96.33:0,96,1939	1/1:0,13:13:39.13:635,39,0
chr10	78870706	.	AT	A	5903.86	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.550;DP=636;FS=1.798;HRun=8;HaplotypeScore=65.3792;InbreedingCoeff=0.9960;MQ=75.35;MQ0=0;MQRankSum=-1.552;QD=23.90;ReadPosRankSum=3.685;VQSLOD=5.6368;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:42.01:396,42,0	0/0:13,0:13:36.11:0,36,435	0/0:10,0:10:14.22:0,14,190	0/0:13,0:13:36.06:0,36,391	0/0:32,0:32:90.26:0,90,1075	1/1:1,31:32:87.14:840,87,0	1/1:2,19:21:54.09:522,54,0	0/0:28,0:28:75.20:0,75,877	1/1:2,20:22:51.08:493,51,0	0/0:39,0:39:99:0,111,1288	0/0:21,0:21:60.11:0,60,683	1/1:0,18:18:45.07:435,45,0	1/1:3,23:26:60.09:579,60,0	1/1:3,19:22:48.08:464,48,0	0/0:19,0:19:54.14:0,54,628	0/0:21,0:21:63.16:0,63,726	0/0:23,0:23:60.18:0,60,725	1/1:1,19:20:51.04:479,51,0	0/0:15,0:15:33.10:0,33,398	0/0:31,0:31:87.26:0,87,1040	0/0:18,0:18:51.15:0,51,607	1/1:4,32:36:93.06:886,93,0	1/1:2,22:24:66.10:637,66,0	1/1:2,7:9:18.03:174,18,0	0/0:15,0:15:45.13:0,45,535	0/0:30,0:30:84.24:0,84,996	0/0:44,0:44:99:0,120,1402	0/0:17,0:17:42.13:0,42,507
chr10	78871250	.	CTCTA	C	3162.22	PASS	AB=0.854;AC=22;AF=0.440;AN=50;BaseQRankSum=3.146;DP=641;FS=3.384;HRun=0;HaplotypeScore=126.3155;InbreedingCoeff=0.6663;MQ=65.42;MQ0=5;MQRankSum=2.491;QD=9.94;ReadPosRankSum=1.425;VQSLOD=3.2197;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:27.09:0,27,600	1/1:7,6:13:15.05:227,15,0	./.	./.	1/1:16,10:26:21.07:318,21,0	0/0:20,0:20:24.08:0,24,555	0/0:14,0:14:12.04:0,12,258	./.	1/1:19,4:23:9.03:136,9,0	0/0:27,0:27:33.09:0,33,663	0/0:16,0:16:18.06:0,18,391	0/0:20,0:28:14.07:0,14,170	0/1:32,1:33:3.59:4,0,837	0/0:22,0:22:21.07:0,21,486	0/0:28,0:28:27.09:0,27,604	0/1:21,5:26:66.66:67,0,392	0/0:19,0:19:27.09:0,27,625	1/1:11,0:15:12.01:110,12,0	1/1:13,7:19:21.07:315,21,0	0/1:20,4:24:57.36:124,0,57	1/1:17,8:25:18.06:272,18,0	0/0:17,1:22:18.06:0,18,364	0/0:22,0:22:27.09:0,27,622	0/0:19,0:19:24.08:0,24,551	1/1:8,25:33:63.21:953,63,0	0/1:14,7:21:45.19:285,0,45	1/1:20,0:36:30.02:275,30,0	1/1:14,9:23:18.06:272,18,0
chr10	78871694	.	GAAACA	G	9107.19	PASS	AB=0.950;AC=25;AF=0.446;AN=56;BaseQRankSum=14.585;DP=662;FS=4.198;HRun=0;HaplotypeScore=138.5486;InbreedingCoeff=0.9195;MQ=63.53;MQ0=0;MQRankSum=-10.666;QD=32.53;ReadPosRankSum=1.459;VQSLOD=4.8056;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,117,3240	1/1:1,3:4:9.03:175,9,0	0/0:33,0:32:80.91:0,81,1858	0/0:24,0:23:32.65:0,33,1072	1/1:2,29:31:69.23:1291,69,0	0/0:20,0:20:51.18:0,51,1498	0/0:24,0:24:54.15:0,54,1402	1/1:11,12:23:36.12:664,36,0	0/0:21,0:21:51.18:0,51,1496	1/1:5,18:21:48.16:925,48,0	1/1:2,19:20:57.20:1104,57,0	0/0:27,0:27:72.25:0,72,1989	0/0:14,0:14:42.14:0,42,1234	0/0:28,0:28:63.20:0,63,1775	1/1:4,9:13:17.64:348,18,0	1/1:2,13:15:33.11:639,33,0	0/0:34,0:34:79.82:0,80,2274	0/0:13,0:13:36.12:0,36,1059	1/1:7,9:16:27.08:481,27,0	1/1:7,24:31:60.20:1141,60,0	1/1:6,11:17:18.06:349,18,0	0/0:23,0:23:51.18:0,51,1499	0/0:25,0:25:54.19:0,54,1584	0/0:33,0:33:75.26:0,75,2094	1/1:1,10:10:24.08:465,24,0	0/1:36,2:38:13.94:14,0,2661	1/1:10,27:37:78.27:1512,78,0	0/0:17,0:17:48.16:0,48,1359
chr10	78871783	.	GGTGT	G	1262.16	PASS	AB=0.959;AC=24;AF=0.462;AN=52;BaseQRankSum=2.899;DP=529;FS=0.752;HRun=0;HaplotypeScore=125.0774;InbreedingCoeff=0.1052;MQ=67.33;MQ0=46;MQRankSum=0.823;QD=4.08;ReadPosRankSum=1.889;VQSLOD=2.5047;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:43.12:0,43,529	0/0:10,0:9:11.85:0,12,107	0/0:32,0:17:6.02:0,6,117	0/0:31,0:18:6.91:0,7,65	1/1:16,0:14:7.76:96,8,0	0/1:10,0:21:39.90:40,0,46	0/0:23,0:21:12.04:0,12,200	1/1:25,4:28:9.17:85,9,0	0/0:20,0:17:33.08:0,33,549	0/1:17,0:16:99:113,0,118	0/1:5,0:15:26.73:27,0,63	1/1:7,0:7:6.41:31,6,0	0/1:15,0:15:38.25:38,0,92	1/1:13,0:13:1.12:13,1,0	0/1:13,0:10:2.36:34,0,2	0/1:20,0:19:3.18:3,0,152	0/0:26,0:25:33.54:0,34,564	0/0:9,0:8:9.03:0,9,169	0/1:12,0:10:29.85:30,0,44	./.	0/1:23,0:17:62.55:63,0,76	1/1:11,0:10:3.95:47,4,0	0/1:18,0:18:30.44:30,0,106	0/0:19,1:17:1.42:0,1,57	1/1:20,0:16:10.75:83,11,0	1/1:26,0:32:45.12:524,45,0	0/1:23,0:23:26.19:170,0,26	./.
chr10	78871856	.	G	GAT	4325.37	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-0.188;DP=490;FS=0.000;HRun=0;HaplotypeScore=94.2095;InbreedingCoeff=0.9878;MQ=66.23;MQ0=17;MQRankSum=-0.062;QD=19.31;ReadPosRankSum=3.087;VQSLOD=5.0721;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:27.66:159,28,0	0/0:4,0:4:12.01:0,12,134	0/0:17,0:12:29.93:0,30,274	0/0:34,0:21:49.82:0,50,517	0/0:14,0:13:15.01:0,15,148	1/1:27,0:26:47.66:400,48,0	1/1:24,0:21:33:358,33,0	0/0:24,0:22:56.91:0,57,509	1/1:17,0:15:32.96:368,33,0	0/0:18,0:18:21.21:0,21,276	0/0:22,0:21:35.25:0,35,280	1/1:15,0:15:34.25:371,34,0	1/1:16,0:15:37.82:355,38,0	1/1:15,0:15:41.97:397,42,0	0/0:7,0:7:14.99:0,15,140	0/0:16,0:15:21.01:0,21,200	0/0:24,0:23:35.61:0,36,337	1/1:8,0:8:18.02:208,18,0	0/0:21,0:21:59.92:0,60,547	0/0:14,0:14:24.39:0,24,193	0/0:15,0:12:21.03:0,21,232	1/1:12,4:16:32.96:274,33,0	1/1:20,0:19:47.13:456,47,0	1/1:23,0:23:38.71:362,39,0	0/0:20,0:20:36.04:0,36,391	1/1:17,0:17:49.76:385,50,0	0/0:16,0:16:32.82:0,33,368	1/1:11,0:11:29.30:232,29,0
chr10	78871921	.	ATGCAG	A	11897.62	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=8.453;DP=564;FS=23.645;HRun=0;HaplotypeScore=122.6539;InbreedingCoeff=0.9991;MQ=80.67;MQ0=0;MQRankSum=-4.955;QD=51.73;ReadPosRankSum=2.394;VQSLOD=3.0665;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.23:0,66,2065	1/1:0,11:11:30.10:622,30,0	0/0:17,0:17:46.36:0,46,1289	0/0:19,0:18:34.43:0,34,1066	1/1:6,28:34:72.24:1523,72,0	0/0:27,0:27:75.26:0,75,2348	0/0:20,0:20:57.15:0,57,1698	1/1:6,18:24:54.16:1053,54,0	0/0:18,0:18:54.19:0,54,1690	1/1:2,13:15:39.13:831,39,0	1/1:0,26:26:75.26:1566,75,0	0/0:16,0:16:45.15:0,45,1343	0/0:22,0:22:63.22:0,63,1972	0/0:21,0:21:63.22:0,63,1958	1/1:2,9:11:27.09:575,27,0	1/1:0,18:18:45.15:959,45,0	0/0:29,0:29:84.29:0,84,2630	0/0:11,0:11:33.11:0,33,1008	1/1:2,8:10:24.08:512,24,0	1/1:1,21:21:51.18:1076,51,0	1/1:0,11:11:27.09:496,27,0	0/0:21,0:21:60.19:0,60,1787	0/0:23,0:23:57.20:0,57,1745	0/0:33,0:33:99:0,99,3058	1/1:0,18:18:51.18:1087,51,0	0/0:23,0:23:66.21:0,66,1984	1/1:1,28:30:75.25:1598,75,0	0/0:9,0:9:27.09:0,27,798
chr10	78873454	.	TAGCTCATCA	T	19884.05	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=7.332;DP=455;FS=0.000;HRun=0;HaplotypeScore=171.1003;InbreedingCoeff=0.7577;MQ=81.26;MQ0=0;MQRankSum=-10.622;QD=51.25;ReadPosRankSum=2.103;VQSLOD=4.5381;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,10:14:20.95:510,21,0	1/1:0,8:8:21.07:653,21,0	0/0:25,0:23:66.14:0,66,2847	0/0:27,0:23:51.71:0,52,2214	1/1:3,17:20:3.01:95,3,0	1/1:1,20:21:48.10:1385,48,0	1/1:2,9:11:18.03:494,18,0	1/1:5,26:31:75.22:2115,75,0	1/1:2,21:23:45.02:1419,45,0	1/1:2,17:19:51.16:1542,51,0	1/1:0,11:11:3.01:36,3,0	1/1:1,11:12:24.02:694,24,0	1/1:0,13:13:17.70:800,18,0	1/1:3,15:18:15.05:413,15,0	1/1:2,15:17:27.09:804,27,0	1/1:0,19:19:45.15:1414,45,0	0/0:15,0:15:42.14:0,42,2065	1/1:0,8:8:12.04:377,12,0	1/1:0,5:5:15.02:354,15,0	1/1:4,24:28:29.98:734,30,0	1/1:3,4:7:3.01:77,3,0	1/1:1,14:15:18.06:391,18,0	1/1:0,14:15:21:510,21,0	1/1:0,3:3:3.01:95,3,0	1/1:0,17:17:45.02:1237,45,0	1/1:2,21:23:57.20:1746,57,0	1/1:1,24:25:51.18:1610,51,0	1/1:0,5:5:12.04:379,12,0
chr10	78875238	.	A	AC	31145.02	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=8.949;DP=808;FS=0.476;HRun=0;HaplotypeScore=170.9573;InbreedingCoeff=0.9999;MQ=86.18;MQ0=0;MQRankSum=-10.251;QD=42.03;ReadPosRankSum=5.820;VQSLOD=3.8122;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:36:93.31:1386,93,0	1/1:0,15:15:42.01:628,42,0	0/0:34,0:34:98.91:0,99,1337	0/0:20,0:20:56.76:0,57,749	1/1:0,29:30:87.29:1286,87,0	1/1:1,36:37:99:1477,99,0	1/1:0,12:13:39.13:583,39,0	1/1:0,35:36:99:1599,108,0	1/1:1,26:27:72.18:1050,72,0	1/1:1,32:33:96.30:1405,96,0	1/1:0,14:15:39.13:584,39,0	1/1:0,37:37:99:1520,102,0	1/1:0,44:44:99:1910,129,0	1/1:0,27:29:84.28:1247,84,0	1/1:0,43:44:99:1922,129,0	1/1:0,28:28:75.03:1116,75,0	0/0:13,0:13:36.12:0,36,503	1/1:0,15:15:42.14:620,42,0	1/1:0,24:23:69.23:1021,69,0	1/1:1,31:32:93.31:1380,93,0	1/1:0,34:34:99:1482,99,0	1/1:0,30:30:84.28:1254,84,0	1/1:1,25:26:75.20:1116,75,0	1/1:2,26:28:69.23:1031,69,0	1/1:0,27:27:81.27:1215,81,0	1/1:0,41:42:99:1838,126,0	1/1:2,41:42:99:1852,126,0	1/1:0,16:16:42.14:623,42,0
chr10	78875815	.	G	GTT	8119.36	PASS	AB=0.862;AC=47;AF=0.839;AN=56;BaseQRankSum=1.333;DP=638;FS=8.681;HRun=9;HaplotypeScore=129.2209;InbreedingCoeff=0.6404;MQ=67.53;MQ0=5;MQRankSum=0.156;QD=14.68;ReadPosRankSum=-1.206;VQSLOD=2.0284;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:27:34.05:254,34,0	1/1:8,0:12:20.45:195,20,0	0/0:37,0:19:3.31:0,3,110	0/0:16,0:9:13.66:0,14,158	1/1:29,0:29:67.90:729,68,0	1/1:21,0:21:31.25:257,31,0	1/1:7,1:8:16.88:132,17,0	1/1:24,1:25:57.09:714,57,0	1/1:14,0:14:14.84:108,15,0	1/1:23,3:26:56.96:752,57,0	1/1:30,0:30:74.70:794,75,0	1/1:16,0:17:13.27:79,13,0	1/1:35,0:35:17.85:106,18,0	1/1:12,0:13:10.37:62,10,0	1/1:18,0:18:12.33:121,12,0	1/1:20,2:22:31.24:511,31,0	0/0:31,0:31:72.07:0,72,734	0/1:8,4:27:0.35:20,0,0	1/1:33,0:32:75.29:942,75,0	1/1:30,0:30:62.01:794,62,0	1/1:9,0:9:16.77:164,17,0	1/1:23,0:23:12.52:43,13,0	0/1:23,0:23:1.56:15,0,2	0/1:11,0:11:3.31:10,0,3	1/1:23,0:23:41.94:484,42,0	1/1:15,0:28:54.78:254,55,0	1/1:27,0:26:33.93:366,34,0	1/1:8,2:20:32.24:211,32,0
chr10	78875825	.	GT	G	1926.72	PASS	AB=0.977;AC=23;AF=0.411;AN=56;BaseQRankSum=-7.294;DP=643;FS=5.820;HRun=14;HaplotypeScore=117.8420;InbreedingCoeff=0.6410;MQ=68.66;MQ0=6;MQRankSum=3.598;QD=5.50;ReadPosRankSum=-2.878;VQSLOD=1.8386;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:27.44:0,27,137	0/1:11,0:11:26.34:55,0,26	0/1:41,2:20:24.85:25,0,25	0/1:23,0:11:1.39:1,0,87	1/1:26,2:28:12.10:220,12,0	0/0:20,0:20:35.75:0,36,158	0/0:10,0:10:9.77:0,10,56	1/1:24,0:24:37.48:228,37,0	0/0:13,0:13:13.69:0,14,67	0/1:24,2:26:56.86:120,0,57	1/1:26,1:27:45.27:267,45,0	0/0:20,0:20:24.30:0,24,128	0/0:33,0:33:30.22:0,30,174	0/0:12,0:12:16.66:0,17,84	0/1:16,0:16:1.68:38,0,2	1/1:21,1:22:19.80:156,20,0	0/0:28,1:31:43.89:0,44,466	0/0:24,0:24:4.30:0,4,32	1/1:34,3:37:42.91:336,43,0	1/1:34,0:34:45.77:315,46,0	1/1:8,0:8:14.31:78,14,0	0/0:24,0:24:27.65:0,28,119	0/0:20,0:20:36.38:0,36,151	0/0:12,0:12:12.52:0,13,67	1/1:25,0:25:15.13:142,15,0	0/0:27,0:27:47.06:0,47,196	1/1:25,0:24:9.97:151,10,0	0/0:22,0:21:43.44:0,43,188
chr10	78875826	.	T	TG	3646.42	PASS	AB=0.699;AC=19;AF=0.339;AN=56;BaseQRankSum=-6.868;DP=644;FS=14.497;HRun=1;HaplotypeScore=112.3851;InbreedingCoeff=0.3668;MQ=67.72;MQ0=6;MQRankSum=5.460;QD=11.88;ReadPosRankSum=2.127;VQSLOD=1.0268;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:43.26:0,43,227	0/1:8,2:10:33.79:71,0,34	0/0:41,0:18:0.53:0,1,121	0/1:23,0:11:12.01:12,0,170	1/1:16,11:28:7.39:431,7,0	0/0:20,0:20:40.33:0,40,230	0/0:10,0:10:21.12:0,21,113	1/1:5,18:23:28.22:423,28,0	0/0:14,0:14:14.11:0,14,76	0/1:9,18:27:34.19:281,0,34	1/1:3,24:27:52.20:496,52,0	0/0:20,0:20:30.27:0,30,191	0/0:33,0:33:44.04:0,44,324	0/0:14,0:14:13.59:0,14,65	0/1:4,12:16:18.48:56,0,18	1/1:5,18:23:31.30:367,31,0	0/0:31,0:31:81.20:0,81,910	0/0:24,0:24:20.53:0,21,150	1/1:9,29:38:3.44:445,3,0	0/1:9,25:34:21.46:472,0,21	0/1:4,3:7:16.48:83,0,16	0/0:24,0:24:56.70:0,57,312	0/0:20,0:20:43.44:0,43,233	0/0:12,0:12:18.03:0,18,103	1/1:6,18:25:19.57:289,20,0	0/0:26,0:26:34.24:0,34,202	0/1:9,15:24:48.23:222,0,48	0/0:22,0:21:19.46:0,19,119
chr10	78875827	.	T	TTTTTG	483.74	PASS	AB=0.917;AC=8;AF=0.143;AN=56;BaseQRankSum=-0.534;DP=648;FS=9.316;HRun=0;HaplotypeScore=163.5191;InbreedingCoeff=0.3130;MQ=68.34;MQ0=6;MQRankSum=-3.013;QD=4.56;ReadPosRankSum=0.234;VQSLOD=2.2040;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,10:25:28.35:452,0,28	0/0:10,0:10:20.79:0,21,156	0/0:42,0:19:15.79:0,16,200	0/0:23,0:11:25.21:0,25,254	0/0:29,0:29:57.91:0,58,399	1/1:20,0:20:16.65:104,17,0	1/1:10,0:10:1.85:21,2,0	0/0:22,0:22:45.58:0,46,335	0/1:14,0:14:5.98:6,0,13	0/0:27,0:27:72.05:0,72,522	0/0:26,0:26:72.26:0,72,511	0/1:20,0:20:24.98:25,0,68	0/0:33,0:33:36.71:0,37,263	0/0:15,0:15:9.90:0,10,49	0/1:16,0:16:3.98:4,0,91	0/0:23,0:23:40.61:0,41,336	0/0:32,0:32:83.88:0,84,1172	0/0:26,0:26:9.14:0,9,131	0/0:40,0:39:14.58:0,15,392	0/0:34,0:34:91.03:0,91,648	0/0:7,0:7:20.77:0,21,168	0/0:25,0:25:31.60:0,32,138	0/0:20,0:20:22.64:0,23,88	0/0:12,0:12:11.74:0,12,56	0/0:24,0:25:2.81:0,3,193	0/0:24,0:25:49.07:0,49,325	0/0:24,0:23:11.14:0,11,283	0/0:22,0:21:42.27:0,42,335
chr10	78875828	.	T	TG	2986.24	PASS	AB=0.655;AC=18;AF=0.321;AN=56;BaseQRankSum=-3.390;DP=652;FS=0.387;HRun=0;HaplotypeScore=115.7407;InbreedingCoeff=0.5461;MQ=67.99;MQ0=6;MQRankSum=-1.075;QD=12.19;ReadPosRankSum=4.102;VQSLOD=4.5702;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:2:0,2,140	0/0:10,0:10:13.40:0,13,134	0/0:42,0:19:23.85:0,24,175	0/0:23,0:10:27.71:0,28,203	0/0:29,0:29:65.20:0,65,416	1/1:1,3:20:18.22:231,18,0	1/1:4,2:11:7.13:117,7,0	0/0:23,0:23:30.31:0,30,226	0/1:5,0:15:7.42:19,0,7	0/0:27,0:27:59.20:0,59,495	0/0:26,0:26:70.44:0,70,390	0/1:7,9:20:23.12:153,0,23	0/1:11,17:34:84.47:143,0,84	0/1:3,10:15:7.13:128,0,7	0/0:16,0:16:17.03:0,17,109	0/0:23,0:23:39.85:0,40,245	0/0:32,0:32:84.25:0,84,973	0/0:26,0:26:26.68:0,27,207	0/0:40,0:39:62.05:0,62,450	0/0:34,0:34:89.65:0,90,556	0/0:7,0:7:18.60:0,19,111	1/1:2,22:24:29.98:513,30,0	1/1:2,17:20:40.18:463,40,0	0/1:3,8:12:2.09:171,0,2	0/1:25,0:25:3.97:4,0,131	1/1:9,17:27:69.85:748,70,0	0/0:24,0:23:48.64:0,49,313	1/1:6,15:21:38.93:486,39,0
chr10	78876571	.	T	TTTGG	43369.88	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.378;DP=585;FS=1.363;HRun=0;HaplotypeScore=269.2307;InbreedingCoeff=0.9874;MQ=53.38;MQ0=0;MQRankSum=-7.700;QD=80.31;ReadPosRankSum=2.490;VQSLOD=4.3722;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,20:26:57.20:1624,57,0	1/1:2,15:17:51.18:1399,51,0	0/0:16,0:16:36.03:0,36,548	0/0:12,0:11:30.10:0,30,417	1/1:3,31:34:93.32:2564,93,0	1/1:5,14:19:57.20:1553,57,0	1/1:3,18:22:66.23:1838,66,0	1/1:10,24:36:99:2979,108,0	1/1:3,22:25:75.26:2153,75,0	1/1:3,21:25:75.24:2069,75,0	1/1:0,13:13:39.09:1057,39,0	1/1:1,23:24:72.25:2072,72,0	1/1:1,28:31:90.31:2578,90,0	1/1:2,25:29:81.28:2323,81,0	1/1:1,16:18:54.19:1548,54,0	1/1:1,18:20:57.20:1649,57,0	0/0:17,0:17:45.11:0,45,494	1/1:1,15:16:48.11:1243,48,0	1/1:9,16:25:69.23:1859,69,0	1/1:1,21:22:66.23:1797,66,0	1/1:3,6:9:24.05:564,24,0	1/1:4,34:39:99:3051,111,0	1/1:6,16:22:63.22:1742,63,0	1/1:0,9:9:24.08:694,24,0	1/1:0,13:13:39.13:1126,39,0	1/1:6,19:25:75.26:2158,75,0	1/1:0,16:17:48.16:1385,48,0	1/1:0,4:4:12.04:347,12,0
chr10	78876683	.	AACT	A	3439.74	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.381;DP=700;FS=2.146;HRun=0;HaplotypeScore=103.4728;InbreedingCoeff=0.9934;MQ=74.41;MQ0=0;MQRankSum=-6.729;QD=46.48;ReadPosRankSum=-0.206;VQSLOD=5.5740;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.29:0,84,1875	0/0:5,0:5:15.04:0,15,302	0/0:21,0:21:48.75:0,49,1018	0/0:14,0:15:30.88:0,31,663	0/0:31,0:31:93.31:0,93,2058	1/1:1,27:28:69.24:1175,69,0	1/1:0,20:20:57.13:937,57,0	0/0:36,0:36:99:0,105,2279	1/1:0,26:26:78.27:1328,78,0	0/0:25,0:25:66.23:0,66,1519	0/0:21,0:21:63.20:0,63,1408	0/0:40,0:40:99:0,117,2651	0/0:45,0:45:99:0,126,2696	0/0:27,0:27:81.28:0,81,1820	0/0:33,0:33:99:0,99,2263	0/0:31,0:31:90.31:0,90,2036	0/0:26,0:26:72.25:0,72,1654	0/0:23,0:23:63.19:0,63,1399	0/0:28,0:28:78.26:0,78,1690	0/0:22,0:22:63.22:0,63,1451	0/0:24,0:24:69.22:0,69,1547	0/0:29,0:29:78.27:0,78,1797	0/0:17,0:17:51.16:0,51,1112	0/0:15,0:15:36.12:0,36,829	0/0:15,0:15:45.15:0,45,1036	0/0:26,0:26:72.72:0,73,1658	0/0:31,0:31:90.31:0,90,2071	0/0:8,0:8:24.07:0,24,508
chr10	78877382	.	CTT	C	5942.57	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-2.384;DP=447;FS=5.278;HRun=3;HaplotypeScore=80.5576;InbreedingCoeff=0.8982;MQ=54.09;MQ0=13;MQRankSum=0.276;QD=16.15;ReadPosRankSum=1.553;VQSLOD=1.9742;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:44.48:351,44,0	1/1:11,0:11:14.89:112,15,0	0/0:23,0:11:13.17:0,13,163	0/0:28,0:10:10.27:0,10,138	1/1:15,1:14:17.35:132,17,0	1/1:24,0:24:53.81:435,54,0	1/1:21,0:20:53.83:435,54,0	1/1:25,0:24:64.45:549,64,0	1/1:9,0:9:23.83:179,24,0	1/1:15,0:15:44.68:337,45,0	1/1:12,0:10:8.99:75,9,0	1/1:6,0:6:17.82:129,18,0	1/1:6,0:6:17.80:128,18,0	1/1:11,0:11:29.69:213,30,0	1/1:14,1:13:17.50:193,17,0	1/1:14,0:14:32.96:272,33,0	0/0:28,0:27:33.41:0,33,717	1/1:15,0:14:41.72:309,42,0	1/1:8,0:6:14.98:129,15,0	1/1:21,1:20:32.96:273,33,0	1/1:12,0:11:14.98:124,15,0	1/1:8,0:8:11.93:93,12,0	1/1:10,0:10:14.85:109,15,0	1/1:13,0:13:16.73:118,17,0	1/1:18,0:17:14.29:125,14,0	1/1:31,0:31:86.72:730,87,0	1/1:12,1:13:29.96:249,30,0	1/1:7,0:7:20.77:144,21,0
chr10	78877428	.	CTTTCTGTGTGTG	C	2997.51	PASS	AB=0.974;AC=18;AF=0.360;AN=50;BaseQRankSum=-1.294;DP=507;FS=3.075;HRun=0;HaplotypeScore=152.9537;InbreedingCoeff=0.7181;MQ=60.35;MQ0=17;MQRankSum=-2.511;QD=20.67;ReadPosRankSum=1.607;VQSLOD=2.9514;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:16.94:0,17,325	1/1:9,0:9:11.36:365,11,0	0/0:31,0:23:63:0,63,2322	0/0:31,0:18:16.68:0,17,1922	./.	0/0:25,0:25:16.84:0,17,179	0/0:13,0:12:7.89:0,8,137	1/1:5,19:22:52.15:1330,52,0	0/0:17,0:17:9.38:0,9,182	1/1:1,8:9:20.41:554,20,0	1/1:0,9:9:3.01:86,3,0	0/0:18,0:18:29.94:0,30,702	0/0:23,0:22:24.84:0,25,553	0/0:19,0:19:8.20:0,8,79	1/1:20,0:20:2.82:107,3,0	1/1:11,0:11:5.82:177,6,0	0/0:37,0:36:96.53:0,97,4090	0/0:16,0:15:18.03:0,18,423	1/1:9,0:8:18.44:339,18,0	./.	./.	0/0:15,0:15:22.22:0,22,289	0/0:21,0:20:16.68:0,17,297	0/0:12,0:12:5.85:0,6,173	0/1:17,0:17:0:0,0,0	0/1:20,0:20:22.20:22,0,1495	1/1:12,0:12:6.05:192,6,0	0/0:9,0:9:20.94:0,21,569
chr10	78877430	.	T	TTC	1135.57	PASS	AB=0.958;AC=29;AF=0.580;AN=50;BaseQRankSum=4.586;DP=509;FS=2.198;HRun=0;HaplotypeScore=124.6346;InbreedingCoeff=0.1940;MQ=60.79;MQ0=16;MQRankSum=-0.594;QD=3.48;ReadPosRankSum=2.329;VQSLOD=2.7410;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:30:8.62:80,9,0	0/0:9,0:9:0.50:0,1,1	0/0:33,0:24:22.19:0,22,590	0/0:32,0:19:38.53:0,39,495	./.	0/1:10,15:25:10.09:20,0,10	1/1:13,0:12:2.62:25,3,0	1/1:22,0:20:2.44:17,2,0	0/1:17,0:17:18.67:32,0,19	0/1:8,0:8:0.59:1,0,1	0/0:10,0:9:0:0,0,0	1/1:18,0:18:26.51:240,27,0	0/1:23,0:22:19.13:147,0,19	1/1:7,13:20:3.01:31,3,0	0/0:20,0:19:2.57:0,3,13	0/1:10,0:10:0:0,0,0	0/0:36,0:35:92.39:0,92,1081	0/1:16,0:15:35.34:45,0,35	1/1:12,0:9:2.56:17,3,0	./.	./.	1/1:4,11:15:14.28:155,14,0	1/1:23,0:22:8.88:63,9,0	1/1:15,0:14:2.51:30,3,0	0/1:17,0:16:0:0,0,0	0/1:21,0:21:41.80:226,0,42	0/1:13,0:13:6.30:11,0,6	1/1:7,0:7:15:136,15,0
chr10	78877432	.	C	CTG	2272	PASS	AB=0.773;AC=26;AF=0.520;AN=50;BaseQRankSum=-2.423;DP=527;FS=1.318;HRun=0;HaplotypeScore=121.2152;InbreedingCoeff=0.6257;MQ=61.61;MQ0=16;MQRankSum=-0.482;QD=8.38;ReadPosRankSum=2.210;VQSLOD=3.6353;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,23:31:8.65:147,9,0	0/0:0,0:9:11.54:0,12,69	0/0:35,0:25:17.04:0,17,579	0/0:38,0:21:50.34:0,50,533	./.	1/1:23,1:24:3.01:50,3,0	1/1:2,14:15:2.63:49,3,0	0/0:22,0:20:32.95:0,33,173	1/1:3,14:17:6.02:85,6,0	0/0:8,0:8:14.49:0,14,82	0/0:10,0:9:2.90:0,3,16	1/1:2,16:18:26.71:418,27,0	0/1:4,19:23:13.55:269,0,14	1/1:18,3:21:3.01:49,3,0	0/0:3,0:20:2.57:0,3,13	0/0:0,0:10:5.65:0,6,34	0/0:35,0:34:75.05:0,75,883	1/1:5,11:15:8.96:115,9,0	0/0:8,0:9:6.69:0,7,34	./.	./.	1/1:15,2:17:17.29:262,17,0	1/1:7,17:23:9.03:129,9,0	1/1:5,10:15:6:71,6,0	0/1:2,0:17:0:0,0,0	1/1:8,13:23:25.22:557,25,0	0/0:5,0:13:1.26:0,1,6	1/1:5,0:5:15.05:245,15,0
chr10	78878819	.	C	CAA	4984.12	PASS	AB=0.778;AC=40;AF=0.714;AN=56;BaseQRankSum=-1.853;DP=575;FS=16.587;HRun=14;HaplotypeScore=103.8440;InbreedingCoeff=0.5415;MQ=75.41;MQ0=1;MQRankSum=0.483;QD=10.63;ReadPosRankSum=-3.770;VQSLOD=1.0793;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:31:47.47:0,47,414	1/1:1,4:6:14.99:165,15,0	0/0:20,0:17:10.49:0,10,71	0/0:10,0:9:6.23:0,6,54	1/1:6,19:33:79.85:763,80,0	0/0:5,0:14:24.61:0,25,106	0/0:2,0:20:38.27:0,38,164	1/1:12,15:33:57.84:476,58,0	0/0:2,0:10:16.41:0,16,73	1/1:14,13:29:31.38:393,31,0	1/1:8,12:24:19.58:314,20,0	1/1:13,2:18:2.37:160,2,0	1/1:5,1:19:17.76:81,18,0	1/1:5,1:20:10.12:65,10,0	1/1:7,1:14:8.35:68,8,0	1/1:2,6:8:5.98:59,6,0	1/1:17,1:29:3.28:161,3,0	0/1:22,0:25:31.53:32,0,216	1/1:6,3:24:55.27:531,55,0	1/1:2,15:18:38.21:347,38,0	1/1:3,4:9:13.75:118,14,0	1/1:14,0:30:1.32:46,1,0	0/1:5,1:17:4.36:67,0,4	0/1:16,0:16:4.78:104,0,5	1/1:8,22:34:40.08:399,40,0	1/1:5,2:33:35.91:318,36,0	1/1:3,14:20:26.44:301,26,0	0/1:3,0:9:18.21:18,0,35
chr10	78879440	.	C	CTCA	33540.71	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-8.936;DP=722;FS=0.000;HRun=0;HaplotypeScore=92.9021;InbreedingCoeff=0.9903;MQ=72.63;MQ0=0;MQRankSum=-5.676;QD=50.59;ReadPosRankSum=3.116;VQSLOD=7.1092;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,36:43:87.76:1709,88,0	1/1:1,7:8:15.05:331,15,0	0/0:15,0:15:24.02:0,24,396	0/0:15,0:15:33.06:0,33,458	1/1:1,33:35:84.29:1842,84,0	1/1:3,21:25:54.19:1191,54,0	1/1:4,14:18:42.14:927,42,0	1/1:11,35:47:99:2728,126,0	1/1:5,27:32:78.27:1719,78,0	1/1:5,23:29:75.22:1571,75,0	1/1:3,25:28:63.22:1390,63,0	1/1:7,29:36:78.27:1710,78,0	1/1:2,22:24:63.22:1373,63,0	1/1:3,19:22:57.19:1193,57,0	1/1:0,39:41:99:2319,108,0	1/1:2,19:22:57.20:1247,57,0	0/0:29,0:29:81.26:0,81,1273	1/1:1,16:17:42.14:927,42,0	1/1:6,14:20:45.15:934,45,0	1/1:2,20:24:45.15:962,45,0	1/1:2,11:15:30.10:651,30,0	1/1:5,24:29:63.21:1351,63,0	1/1:2,26:30:72.25:1581,72,0	1/1:4,11:14:30.10:661,30,0	1/1:4,20:24:54.19:1191,54,0	1/1:5,26:32:84.26:1748,84,0	1/1:6,31:37:87.30:1917,87,0	1/1:4,5:10:18.06:368,18,0
chr10	78881186	.	A	AAAACAAAC	12275.92	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-0.149;DP=670;FS=2.706;HRun=0;HaplotypeScore=165.4033;InbreedingCoeff=0.9622;MQ=64.92;MQ0=1;MQRankSum=-4.908;QD=26.74;ReadPosRankSum=-1.347;VQSLOD=4.5874;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:34:9.28:358,9,0	1/1:6,6:14:18.06:739,18,0	0/0:29,0:23:14.78:0,15,257	0/0:23,0:22:20.94:0,21,384	1/1:18,8:36:24.07:851,24,0	1/1:12,0:27:9.03:244,9,0	1/1:12,1:26:15.05:478,15,0	1/1:15,0:26:36.01:407,36,0	1/1:12,0:20:18.06:627,18,0	1/1:13,6:22:27.07:795,27,0	1/1:9,11:23:33.03:1157,33,0	0/0:33,0:33:72.20:0,72,1532	0/0:17,0:17:27.07:0,27,581	0/0:20,0:20:35.99:0,36,826	1/1:11,11:30:18.06:740,18,0	1/1:4,9:18:27.09:1110,27,0	0/0:33,0:33:60.14:0,60,1426	1/1:9,0:25:38.79:308,39,0	1/1:10,0:17:20.99:185,21,0	1/1:18,0:31:29.92:263,30,0	1/1:3,0:11:11.99:98,12,0	0/0:11,0:11:18.06:0,18,428	0/0:9,0:9:18.04:0,18,356	0/0:36,0:36:22.63:0,23,1216	1/1:11,9:21:27.09:1098,27,0	1/1:11,14:31:53.91:1614,54,0	1/1:8,0:37:57.72:467,58,0	1/1:4,6:10:18.06:735,18,0
chr10	78881427	.	G	GT	10477.99	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-17.757;DP=642;FS=0.971;HRun=6;HaplotypeScore=80.2512;InbreedingCoeff=0.9980;MQ=72.86;MQ0=0;MQRankSum=-0.353;QD=31.95;ReadPosRankSum=0.171;VQSLOD=4.9902;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.19:0,87,884	1/1:2,18:20:48.15:604,48,0	0/0:19,0:19:34.40:0,34,370	0/0:7,0:7:18.93:0,19,185	1/1:0,46:46:99:1640,135,0	0/0:27,0:27:69.15:0,69,704	0/0:15,0:15:39.06:0,39,390	1/1:2,44:46:99:1659,132,0	0/0:14,0:14:39.09:0,39,398	1/1:4,21:25:63.20:792,63,0	1/1:4,24:28:60.15:733,60,0	0/0:19,0:19:48.09:0,48,482	0/0:23,0:23:69.12:0,69,693	0/0:20,0:20:51.11:0,51,519	1/1:3,19:22:45.14:566,45,0	1/1:2,15:17:39.12:491,39,0	0/0:27,0:27:69.15:0,69,704	0/0:13,0:13:36.08:0,36,366	1/1:3,24:27:72.23:902,72,0	1/1:2,21:23:63.20:789,63,0	1/1:3,11:14:24.08:302,24,0	0/0:18,0:18:54.09:0,54,542	0/0:26,0:26:75.15:0,75,757	0/0:22,0:22:60.13:0,60,612	1/1:0,32:32:78.25:981,78,0	0/0:25,0:25:28.59:0,29,599	1/1:0,28:28:81.26:1019,81,0	0/0:9,0:9:21.04:0,21,214
chr10	78883089	.	CT	C	5164.40	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-11.894;DP=482;FS=0.365;HRun=9;HaplotypeScore=81.3571;InbreedingCoeff=0.9884;MQ=71.38;MQ0=0;MQRankSum=0.351;QD=23.47;ReadPosRankSum=3.121;VQSLOD=5.5175;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,34:40:87.08:891,87,0	0/0:0,0:6:17.04:0,17,86	0/0:25,0:25:66.02:0,66,691	0/0:14,0:13:27.51:0,28,285	0/0:5,0:33:82.58:0,83,439	1/1:2,24:26:72.04:659,72,0	1/1:0,14:14:39.02:357,39,0	0/0:6,0:26:54.71:0,55,287	1/1:1,15:16:45.02:412,45,0	0/0:8,0:17:22.68:0,23,115	0/0:2,0:16:28.53:0,29,150	1/1:2,18:20:54.03:494,54,0	1/1:1,10:11:27.01:247,27,0	1/1:1,15:16:45.02:412,45,0	0/0:2,0:14:34.09:0,34,173	0/0:2,0:11:22.88:0,23,126	0/0:23,0:23:57.17:0,57,657	1/1:4,17:21:37.75:402,38,0	0/0:1,0:14:31.25:0,31,159	0/0:4,0:16:24.03:0,24,156	0/0:0,0:6:14.20:0,14,72	1/1:1,5:6:12:110,12,0	1/1:0,9:9:23.84:219,24,0	1/1:1,13:14:36.02:329,36,0	0/0:1,0:25:62.50:0,62,318	1/1:2,17:19:51.02:466,51,0	0/0:2,0:14:22.73:0,23,115	1/1:1,7:8:18.01:165,18,0
chr10	78883414	.	CA	C	11507.43	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=12.758;DP=650;FS=12.266;HRun=1;HaplotypeScore=63.0050;InbreedingCoeff=0.9941;MQ=59.69;MQ0=3;MQRankSum=1.700;QD=38.36;ReadPosRankSum=4.725;VQSLOD=4.4728;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:37:93.31:1296,93,0	0/0:8,0:8:24.08:0,24,382	0/0:28,0:16:45.15:0,45,720	0/0:28,0:21:63.20:0,63,951	0/0:31,0:31:90.31:0,90,1436	1/1:0,23:23:66.22:922,66,0	1/1:0,31:31:78.26:1087,78,0	0/0:29,0:27:75.23:0,75,1138	1/1:0,33:33:90.30:1255,90,0	0/0:20,0:20:57.19:0,57,892	0/0:8,0:8:24.08:0,24,381	1/1:0,27:27:74.98:1048,75,0	1/1:0,23:23:66.22:921,66,0	1/1:0,26:26:72.24:1006,72,0	0/0:31,0:31:93.29:0,93,1434	0/0:18,0:18:54.16:0,54,818	0/0:24,0:24:72.25:0,72,1145	1/1:0,25:25:75.25:1047,75,0	0/0:20,0:18:53.51:0,54,756	0/0:18,0:18:54.18:0,54,859	0/0:37,0:37:99:0,111,1691	1/1:0,6:6:18.06:252,18,0	1/1:0,14:14:36.12:503,36,0	1/1:0,31:31:90.30:1257,90,0	0/0:25,0:25:75.24:0,75,1161	1/1:0,19:19:57.04:748,57,0	0/0:25,0:24:75.26:0,75,1193	1/1:0,4:4:12.04:167,12,0
chr10	78883918	.	CTGGGGCTCGCTGGCCAGCAGATCTACAAGCCCCGGGT	C	7190.19	PASS	AB=0.854;AC=16;AF=0.320;AN=50;BaseQRankSum=7.052;DP=447;FS=54.100;HRun=0;HaplotypeScore=422.9936;InbreedingCoeff=0.7547;MQ=82.67;MQ0=0;MQRankSum=-7.628;QD=81.71;ReadPosRankSum=2.816;VQSLOD=2.4354;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.74:0,85,8327	1/1:5,1:6:3.01:273,3,0	0/0:16,0:16:42.14:0,42,2096	0/0:15,0:16:41.98:0,42,994	./.	0/0:15,0:15:42.14:0,42,5024	0/0:24,0:24:69.22:0,69,8504	./.	0/0:21,0:21:60.21:0,60,6865	1/1:10,3:13:9.03:872,9,0	0/1:5,0:5:0:0,0,0	0/0:30,0:30:76.02:0,76,9899	0/0:17,0:17:42.14:0,42,5982	0/0:19,0:19:51.16:0,51,6416	0/1:10,7:17:99:1970,0,487	1/1:2,10:12:18.06:1707,18,0	0/0:25,0:25:75.26:0,75,9536	0/0:28,0:28:81.28:0,81,12502	1/1:6,1:7:3.01:291,3,0	1/1:9,0:9:3:49,3,0	./.	0/0:18,0:18:45.14:0,45,3932	0/0:10,0:10:30.10:0,30,3230	0/0:34,0:34:90.27:0,90,11573	1/1:5,3:8:15.03:888,15,0	0/0:22,0:22:66.22:0,66,6419	1/1:7,4:11:12.04:1142,12,0	0/0:8,0:8:24.08:0,24,3128
chr10	78884056	.	TCCTCTCTC	T	2960.19	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-6.266;DP=453;FS=5.225;HRun=0;HaplotypeScore=105.9921;InbreedingCoeff=0.9063;MQ=46.29;MQ0=52;MQRankSum=-0.215;QD=15.83;ReadPosRankSum=1.413;VQSLOD=2.3916;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:18:23.89:0,24,186	1/1:2,1:3:5.48:113,5,0	0/0:20,0:8:4.09:0,4,81	0/0:23,0:11:9.75:0,10,130	1/1:15,1:17:35.90:296,36,0	0/0:18,0:17:35.36:0,35,303	0/0:20,0:18:26.91:0,27,223	1/1:16,0:14:41.84:342,42,0	0/0:13,0:13:29.83:0,30,235	1/1:7,1:6:17.95:238,18,0	1/1:8,0:10:11.99:104,12,0	0/0:10,0:10:20.76:0,21,150	0/0:17,0:13:28.17:0,28,196	0/0:9,0:9:15.61:0,16,150	1/1:5,16:17:5.62:99,6,0	1/1:9,2:11:29.70:291,30,0	0/0:17,0:13:17.43:0,17,136	0/0:13,0:9:23.65:0,24,173	1/1:2,21:22:47.46:582,47,0	1/1:2,0:9:8.17:49,8,0	1/1:28,0:25:41.56:318,42,0	0/0:16,0:14:26.90:0,27,216	0/0:12,0:11:11.93:0,12,93	0/0:24,0:15:16.08:0,16,107	1/1:18,0:15:28.08:225,28,0	0/0:14,0:11:32.51:0,33,248	1/1:12,3:14:38.99:521,39,0	0/0:14,0:8:9.10:0,9,136
chr10	78884076	.	CTCT	C	172.35	PASS	AB=0.983;AC=17;AF=0.315;AN=54;BaseQRankSum=6.176;DP=370;FS=21.384;HRun=0;HaplotypeScore=82.6826;InbreedingCoeff=0.0928;MQ=35.47;MQ0=89;MQRankSum=-2.583;QD=0.96;ReadPosRankSum=-0.067;VQSLOD=0.1346;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:11:2.71:34,3,0	0/1:3,0:2:1.88:2,0,33	0/0:6,0:2:6.02:0,6,76	0/1:7,0:3:12.54:13,0,32	0/0:16,0:15:21.06:0,21,266	0/0:9,0:7:4.32:0,4,29	1/1:9,0:5:0.47:2,0,0	0/0:6,0:4:12:0,12,134	0/1:9,0:8:15.77:27,0,16	0/0:15,0:13:18.43:0,18,266	0/0:11,0:9:6.01:0,6,77	1/1:13,2:13:1.39:25,1,0	0/1:13,0:9:2.41:34,0,2	0/1:9,1:10:7.23:68,0,7	0/0:23,0:16:5.81:0,6,59	0/0:15,0:10:13.75:0,14,206	0/0:22,0:11:9.03:0,9,110	0/1:14,0:6:40.14:40,0,41	0/1:20,0:17:1.50:2,0,238	./.	0/0:22,0:16:13.85:0,14,156	0/0:9,1:7:2.33:0,2,10	0/0:6,0:6:0:0,0,1	1/1:30,3:16:6.23:43,6,0	0/0:16,0:13:12.14:0,12,123	0/0:6,0:2:1.76:0,2,13	0/1:11,0:8:0.78:1,0,136	0/1:14,0:4:16.14:16,0,32
chr10	78884113	.	CTCTCT	C	176.95	PASS	AB=0.938;AC=12;AF=0.240;AN=50;BaseQRankSum=0.932;DP=369;FS=8.519;HRun=0;HaplotypeScore=85.8033;InbreedingCoeff=0.0104;MQ=20.87;MQ0=128;MQRankSum=0.664;QD=1.21;ReadPosRankSum=-2.894;VQSLOD=0.0756;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,1:13:1.43:28,1,0	0/1:4,0:3:1.94:8,0,2	./.	./.	./.	0/0:21,0:9:2.78:0,3,10	0/1:15,7:11:15.14:25,0,15	0/0:9,0:7:13.29:0,13,166	0/1:14,0:10:11.49:15,0,11	0/0:19,0:16:46.17:0,46,440	0/0:8,0:7:0:0,0,0	0/0:19,0:14:0.80:0,1,64	0/0:8,0:5:8.05:0,8,41	0/0:7,0:5:1.61:0,2,36	0/1:16,0:4:0:0,0,0	0/1:12,0:7:11.66:12,0,30	0/0:30,0:12:11.97:0,12,249	0/1:18,0:8:67.59:114,0,68	0/0:5,0:4:6.08:0,6,45	0/0:9,0:6:0:0,0,0	0/0:17,0:9:0.47:0,0,1	1/1:18,0:13:0.47:2,0,0	0/0:5,0:4:1.55:0,2,4	0/0:34,0:14:2.84:0,3,83	0/0:12,0:6:0:0,0,0	0/1:6,0:3:28.92:66,0,29	0/0:9,0:4:2.22:0,2,7	0/1:11,0:6:17.47:17,0,60
chr10	78884115	.	CTCT	C	85.46	PASS	AB=0.960;AC=14;AF=0.292;AN=48;BaseQRankSum=0.847;DP=349;FS=12.363;HRun=0;HaplotypeScore=77.3393;InbreedingCoeff=0.0683;MQ=20.56;MQ0=127;MQRankSum=-1.050;QD=0.55;ReadPosRankSum=-3.121;VQSLOD=-0.1021;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:13:0.57:16,0,1	1/1:2,0:2:4.23:15,4,0	./.	./.	./.	0/0:16,1:9:3.10:0,3,12	0/0:18,3:10:5.82:0,6,23	0/0:8,0:6:8.15:0,8,88	0/1:8,5:10:14.03:15,0,14	0/0:15,0:12:34.65:0,35,320	0/0:6,0:5:0:0,0,0	0/0:20,0:13:0.72:0,1,63	0/0:8,0:5:8.77:0,9,52	0/0:7,0:5:1.58:0,2,36	0/1:14,0:2:0:0,0,0	0/1:9,0:4:11.66:12,0,30	0/0:30,0:12:12.04:0,12,209	0/1:17,0:8:63.60:73,0,64	0/0:2,0:2:3.47:0,3,27	0/1:9,0:6:0.08:0,0,0	0/1:17,0:9:0.04:0,0,0	1/1:18,0:14:0.26:2,0,0	0/0:6,0:5:2.04:0,2,6	0/0:35,0:15:2.84:0,3,64	0/1:11,0:5:0.08:0,0,0	0/1:7,0:3:25.33:54,0,25	./.	0/1:12,0:6:6.61:7,0,35
chr10	78884121	.	CT	C	427.14	PASS	AB=0.839;AC=18;AF=0.375;AN=48;BaseQRankSum=-1.793;DP=352;FS=5.881;HRun=1;HaplotypeScore=74.0976;InbreedingCoeff=0.2123;MQ=21.60;MQ0=117;MQRankSum=-1.530;QD=2.77;ReadPosRankSum=0.703;VQSLOD=-0.4518;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:13:1.37:1,0,2	1/1:0,2:2:5.38:48,5,0	./.	./.	./.	0/0:25,0:13:8.44:0,8,70	0/0:23,0:13:8.31:0,8,39	1/1:4,6:8:6.07:246,6,0	0/1:15,0:11:0.61:1,0,36	0/1:7,7:12:28.27:183,0,28	0/0:4,2:5:0:0,0,0	0/0:19,0:12:1.19:0,1,35	0/0:8,0:5:7.20:0,7,60	0/0:7,0:5:1.80:0,2,12	0/0:14,0:3:2.79:0,3,37	0/1:7,3:5:28.11:37,0,28	0/0:28,0:12:12.01:0,12,155	0/1:19,0:8:2.65:3,0,85	1/1:1,1:2:2.48:12,2,0	0/1:6,3:6:0.02:0,0,0	0/1:13,2:9:0:0,0,0	1/1:19,0:14:0.40:2,0,0	0/0:7,0:5:2.88:0,3,15	0/0:35,1:15:2.57:0,3,47	0/1:5,6:5:0:0,0,0	1/1:7,0:3:2.05:8,2,0	./.	0/0:12,0:6:5.71:0,6,44
chr10	78884122	.	T	TC	497.92	PASS	AB=0.979;AC=19;AF=0.413;AN=46;BaseQRankSum=-1.436;DP=351;FS=5.563;HRun=1;HaplotypeScore=73.1459;InbreedingCoeff=0.2540;MQ=21.63;MQ0=116;MQRankSum=-1.244;QD=3.48;ReadPosRankSum=0.308;VQSLOD=0.0406;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:13:1.67:2,0,2	1/1:2,0:2:5.88:54,6,0	./.	./.	./.	0/0:25,0:13:8.28:0,8,69	0/0:24,0:13:7.81:0,8,31	1/1:11,0:9:5.99:246,6,0	0/1:15,0:11:4.69:5,0,23	1/1:11,3:12:3.67:244,4,0	./.	0/0:18,0:11:1.18:0,1,35	0/1:8,0:5:0.02:0,0,39	1/1:7,0:5:0.38:1,0,0	0/0:14,0:3:2.79:0,3,38	0/1:10,0:5:28.03:37,0,28	0/0:28,0:12:11.06:0,11,122	0/0:19,0:8:6.39:0,6,111	1/1:2,0:2:2.87:17,3,0	0/1:9,0:6:0.03:0,0,0	0/1:13,1:9:0:0,0,0	1/1:19,0:14:0.39:2,0,0	0/0:6,0:4:2.88:0,3,15	0/0:35,0:15:2.41:0,2,39	0/1:10,1:5:0:1,0,0	0/0:7,0:3:2.80:0,3,7	./.	0/0:12,0:6:0.03:0,0,39
chr10	78884124	.	T	TC	393.30	PASS	AB=0.984;AC=16;AF=0.348;AN=46;BaseQRankSum=-1.657;DP=351;FS=1.034;HRun=1;HaplotypeScore=72.8574;InbreedingCoeff=0.1760;MQ=21.85;MQ0=115;MQRankSum=-0.773;QD=2.87;ReadPosRankSum=0.736;VQSLOD=-0.4041;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:13:0.23:11,0,0	1/1:2,0:2:5.99:52,6,0	./.	./.	./.	0/0:25,0:13:11.29:0,11,124	0/0:24,0:13:7.51:0,8,26	0/1:12,0:10:25.44:111,0,25	0/1:15,0:11:9.79:15,0,10	1/1:14,1:13:8.28:251,8,0	./.	0/0:19,0:12:1.07:0,1,35	0/1:8,0:5:11.52:12,0,37	0/0:6,0:4:1.89:0,2,15	0/0:14,0:3:2.79:0,3,38	0/1:10,0:5:10.12:29,0,10	0/0:29,0:13:11.24:0,11,123	0/0:19,0:8:11.07:0,11,105	1/1:2,0:2:2.94:31,3,0	0/1:9,0:6:0.03:0,0,0	0/1:12,2:9:0:0,0,0	1/1:18,0:13:0.39:2,0,0	0/0:6,0:4:2.88:0,3,15	0/0:33,0:14:2.58:0,3,39	0/1:11,0:5:0:1,0,0	0/0:7,0:3:4.25:0,4,36	./.	0/0:12,0:6:4.82:0,5,36
chr10	78886837	.	GC	G	2312.52	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-1.156;DP=509;FS=0.000;HRun=6;HaplotypeScore=72.4436;InbreedingCoeff=0.9824;MQ=73.13;MQ0=0;MQRankSum=0.232;QD=25.14;ReadPosRankSum=2.341;VQSLOD=3.7856;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:72.23:0,72,945	0/0:7,0:7:18.06:0,18,237	0/0:9,0:9:24.07:0,24,306	0/0:17,0:17:35.98:0,36,410	0/0:16,0:16:45.12:0,45,572	1/1:1,15:16:39.10:419,39,0	1/1:3,25:28:72.18:773,72,0	0/0:19,0:19:51.16:0,51,659	1/1:0,20:20:60.15:644,60,0	0/0:21,0:21:60.18:0,60,760	0/0:9,0:9:27.04:0,27,332	0/0:27,0:27:81.23:0,81,1035	0/0:13,0:13:37.67:0,38,476	0/0:17,0:17:45.11:0,45,561	0/0:14,0:14:42.14:0,42,551	0/0:13,0:13:39.13:0,39,512	0/0:19,0:19:54.18:0,54,711	0/0:29,0:29:81.25:0,81,1049	0/0:15,0:15:39.11:0,39,493	0/0:13,0:13:30.10:0,30,392	0/0:41,0:41:99:0,108,1360	0/0:16,0:16:48.15:0,48,619	0/0:14,0:14:39.13:0,39,509	0/0:23,0:23:69.22:0,69,902	0/0:15,0:15:39.13:0,39,513	1/1:4,19:23:20.61:550,21,0	0/0:21,0:21:60.19:0,60,786	1/1:1,4:5:9.02:97,9,0
chr10	78887877	.	T	TAA	7994.50	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-8.730;DP=622;FS=5.322;HRun=11;HaplotypeScore=117.9427;InbreedingCoeff=0.9082;MQ=75.65;MQ0=2;MQRankSum=-0.441;QD=24.15;ReadPosRankSum=-4.882;VQSLOD=2.9961;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:55:99:0,118,509	1/1:2,5:7:6.02:87,6,0	0/0:27,0:18:20.34:0,20,139	0/1:24,0:22:2.89:3,0,192	1/1:6,10:19:46.36:507,46,0	1/1:4,9:17:30.45:397,30,0	1/1:2,15:18:29.59:400,30,0	1/1:8,21:31:64.66:831,65,0	1/1:3,15:20:42.09:554,42,0	1/1:10,18:29:53.94:704,54,0	1/1:4,9:15:40.29:455,40,0	0/0:1,0:16:37.50:0,37,159	0/0:2,0:22:49.39:0,49,213	0/0:1,0:22:52:0,52,223	1/1:2,24:28:53.66:732,54,0	1/1:3,11:14:33.11:478,33,0	0/0:27,0:29:65.67:0,66,661	0/0:21,0:22:53.77:0,54,506	1/1:4,15:22:55.56:623,56,0	1/1:3,14:19:44.59:588,45,0	1/1:3,10:16:12.69:271,13,0	0/0:4,0:28:60.30:0,60,260	0/0:5,0:20:32.90:0,33,142	0/0:1,0:22:52.14:0,52,225	0/0:1,0:24:57.64:0,58,249	1/1:8,17:27:57.05:738,57,0	1/1:3,17:22:44.63:583,45,0	1/1:0,1:2:3.01:43,3,0
chr10	78889006	.	ACTAGAAAATATTATC	A	26772.93	PASS	AB=0.556;AC=33;AF=0.589;AN=56;BaseQRankSum=16.406;DP=619;FS=18.418;HRun=0;HaplotypeScore=233.7714;InbreedingCoeff=0.9112;MQ=42.46;MQ0=10;MQRankSum=-14.791;QD=80.64;ReadPosRankSum=2.316;VQSLOD=3.2759;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.26:0,75,5349	1/1:1,8:9:21.07:941,21,0	0/0:30,0:7:21.07:0,21,1294	0/0:32,0:7:17.07:0,17,875	1/1:5,18:23:30.07:1130,30,0	1/1:3,16:17:39.13:1744,39,0	0/1:2,8:10:25.08:1050,0,25	1/1:7,15:14:36.08:1059,36,0	1/1:2,11:10:15.05:675,15,0	1/1:5,18:21:39.13:1669,39,0	1/1:2,15:16:30.10:1343,30,0	0/0:26,0:26:72.23:0,72,4425	0/0:35,0:35:99:0,99,6683	0/0:17,0:17:48.16:0,48,2573	1/1:1,26:25:63.22:2832,63,0	1/1:7,24:26:51.18:2295,51,0	0/0:29,0:28:72.22:0,72,4726	0/0:19,0:19:48.16:0,48,3341	1/1:9,9:13:18.06:642,18,0	1/1:5,30:34:72.25:3132,72,0	1/1:1,7:7:9.03:310,9,0	0/0:21,0:21:63.22:0,63,4144	0/0:29,0:29:78.23:0,78,5091	0/0:21,0:21:51.18:0,51,3703	1/1:3,18:21:51.18:2268,51,0	1/1:1,20:18:51.16:2185,51,0	1/1:4,25:27:60.21:2689,60,0	1/1:0,6:6:18.06:810,18,0
chr10	78889808	.	GA	G	1461.06	PASS	AB=0.861;AC=18;AF=0.321;AN=56;BaseQRankSum=4.888;DP=287;FS=3.182;HRun=9;HaplotypeScore=38.4870;InbreedingCoeff=0.8203;MQ=73.07;MQ0=6;MQRankSum=-3.031;QD=18.04;ReadPosRankSum=2.566;VQSLOD=3.4334;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:33.01:302,33,0	0/0:6,0:6:18.05:0,18,208	0/0:25,0:16:31.99:0,32,302	0/0:14,0:11:23.54:0,24,235	0/0:14,0:14:39.07:0,39,435	0/1:7,1:8:6.39:6,0,186	0/0:7,0:7:15.04:0,15,173	0/0:25,0:25:60.16:0,60,674	0/0:6,0:6:18.05:0,18,208	0/0:13,1:14:11.65:0,12,388	0/0:14,0:14:39.07:0,39,432	1/1:0,7:7:21.01:192,21,0	1/1:0,5:5:12.01:110,12,0	1/1:1,15:16:45.02:412,45,0	0/0:6,0:6:18.05:0,18,208	0/0:9,0:9:27.08:0,27,311	0/0:15,0:15:39.12:0,39,450	1/1:2,8:10:24.01:220,24,0	0/0:9,0:8:21.06:0,21,243	0/0:9,0:9:27.08:0,27,311	0/0:6,0:6:15.04:0,15,173	1/1:0,6:6:15.01:137,15,0	1/1:1,4:5:12:110,12,0	1/1:0,6:6:18.01:165,18,0	0/0:4,0:4:12.04:0,12,139	0/0:12,0:12:33.10:0,33,381	0/0:10,0:10:30.06:0,30,332	0/1:4,1:5:12.42:12,0,123
chr10	78891311	.	AAT	A	225.08	PASS	AB=0.985;AC=12;AF=0.214;AN=56;BaseQRankSum=6.075;DP=555;FS=29.025;HRun=0;HaplotypeScore=96.5494;InbreedingCoeff=-0.0419;MQ=77.33;MQ0=1;MQRankSum=0.353;QD=0.96;ReadPosRankSum=4.295;VQSLOD=0.0963;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:17.91:18,0,142	0/1:11,0:11:30.22:30,0,36	0/0:26,0:22:42.05:0,42,480	0/0:19,0:15:13.13:0,13,226	0/1:24,2:26:95.38:95,0,103	0/0:14,0:14:34.42:0,34,179	0/0:17,0:17:26.25:0,26,174	0/1:24,0:24:0.34:0,0,156	0/0:12,0:12:28.78:0,29,164	0/1:26,0:26:8.08:8,0,228	0/0:15,0:15:17.55:0,18,144	0/0:17,0:17:11.82:0,12,103	0/0:24,0:24:23.35:0,23,146	0/0:15,0:15:18.40:0,18,89	0/1:20,0:20:17.44:17,0,85	1/1:14,0:14:20.82:54,21,0	0/0:23,0:23:68.99:0,69,949	0/0:15,0:15:26.86:0,27,137	0/0:22,0:22:25.04:0,25,275	0/1:23,2:25:56.35:56,0,165	0/1:16,0:16:19.60:20,0,47	0/0:28,0:28:27.88:0,28,176	0/0:22,0:22:27.62:0,28,191	0/0:24,0:24:25.64:0,26,111	0/1:21,0:21:48.92:49,0,113	0/0:19,0:19:43.16:0,43,362	0/1:23,0:23:27.93:28,0,56	0/0:6,0:6:15.84:0,16,92
chr10	78891313	.	TAA	T	4487.03	PASS	AB=0.762;AC=42;AF=0.750;AN=56;BaseQRankSum=1.256;DP=562;FS=0.449;HRun=14;HaplotypeScore=84.3264;InbreedingCoeff=0.5441;MQ=74.88;MQ0=1;MQRankSum=-0.409;QD=9.73;ReadPosRankSum=5.348;VQSLOD=3.2091;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,20:31:11.52:311,0,12	1/1:3,7:11:8.87:130,9,0	0/0:26,0:22:21:0,21,226	0/0:16,0:13:1.62:0,2,162	1/1:7,19:26:35.81:328,36,0	0/0:3,0:15:30.45:0,30,120	0/1:4,0:18:0.66:1,0,73	1/1:8,13:22:38.55:330,39,0	0/0:3,0:13:25.94:0,26,116	1/1:12,15:27:2.96:306,3,0	1/1:9,7:16:2.39:74,2,0	1/1:4,1:17:17.87:104,18,0	1/1:5,0:25:10.75:137,11,0	1/1:2,0:14:13.82:90,14,0	1/1:6,15:21:38.97:361,39,0	1/1:0,14:14:42.05:389,42,0	0/0:26,0:27:77.67:0,78,956	1/1:5,0:15:19.18:83,19,0	1/1:10,10:21:10.66:247,11,0	1/1:12,13:26:9.72:260,10,0	1/1:2,10:15:26.22:202,26,0	1/1:6,1:28:20.80:157,21,0	1/1:6,0:21:15.57:95,16,0	1/1:1,1:22:38.42:166,38,0	1/1:7,13:21:14.57:291,15,0	0/1:20,0:20:24.04:24,0,43	1/1:4,18:22:42.01:389,42,0	0/1:7,0:8:13.80:14,0,27
chr10	78891324	.	AAAAC	A	491.65	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=-0.915;DP=553;FS=20.159;HRun=0;HaplotypeScore=120.3700;InbreedingCoeff=0.6622;MQ=67.62;MQ0=1;MQRankSum=0.665;QD=7.13;ReadPosRankSum=-0.992;VQSLOD=1.3069;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:72.06:0,72,615	0/0:11,0:11:23.82:0,24,185	0/0:21,0:15:29.18:0,29,465	0/0:16,0:11:11.72:0,12,343	0/0:26,0:26:50.33:0,50,373	0/0:18,0:18:48.12:0,48,619	0/0:21,0:21:36.05:0,36,428	0/0:26,0:26:67.14:0,67,545	0/0:15,0:15:39.09:0,39,506	0/0:25,0:25:59.26:0,59,440	0/0:16,0:16:32.86:0,33,330	0/0:14,0:14:13.55:0,14,47	0/0:23,0:23:25.74:0,26,140	0/0:17,0:17:30.21:0,30,167	0/0:23,0:23:59.71:0,60,489	0/0:16,0:16:47.67:0,48,365	0/0:28,0:28:81.21:0,81,1647	0/0:10,0:10:10.58:0,11,25	0/0:17,0:17:42.67:0,43,324	0/0:24,0:24:51.16:0,51,425	0/0:18,0:18:37.54:0,38,300	0/0:26,0:26:31.55:0,32,162	0/1:20,0:20:11.96:12,0,139	0/1:23,0:23:0.33:0,0,47	0/0:20,0:20:40.27:0,40,302	1/1:12,6:18:13.45:375,13,0	0/0:18,0:18:41.34:0,41,287	1/1:6,2:8:21.77:228,22,0
chr10	78891612	.	C	CCTGTGAACCACAGTGACCGGT	134504.24	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.162;DP=862;FS=6.444;HRun=0;HaplotypeScore=422.6937;InbreedingCoeff=0.9890;MQ=61.59;MQ0=0;MQRankSum=-14.059;QD=173.33;ReadPosRankSum=1.830;VQSLOD=4.3572;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:34,4:42:87.30:5972,87,0	1/1:11,1:13:36.12:3238,36,0	0/0:21,0:21:51.17:0,51,2173	0/0:24,0:24:62:0,62,2337	1/1:27,3:32:59.10:3492,59,0	1/1:15,2:19:45.15:3565,45,0	1/1:34,0:34:87.09:5748,87,0	1/1:32,0:32:90.29:5254,90,0	1/1:22,11:38:99:8457,99,0	1/1:32,7:40:99:8908,117,0	1/1:18,2:24:45.15:2899,45,0	1/1:28,11:43:99:8891,114,0	1/1:22,10:37:93.32:7848,93,0	1/1:23,11:40:99:8849,105,0	1/1:47,8:58:99:11296,160,0	1/1:13,12:28:72.25:6291,72,0	0/0:41,0:41:99:0,117,5668	1/1:10,5:18:42.14:3790,42,0	1/1:16,2:18:45.15:2438,45,0	1/1:19,4:28:69.23:3941,69,0	1/1:24,1:33:48.16:2833,48,0	1/1:35,6:44:99:6907,108,0	1/1:26,3:33:60.20:3532,60,0	1/1:17,5:26:48.16:3279,48,0	1/1:24,5:32:81.27:5075,81,0	1/1:23,4:31:84.23:5621,84,0	1/1:19,7:28:69.24:5360,69,0	1/1:3,1:4:12.04:1021,12,0
chr10	78893126	.	C	CCATATGAACAACAATGT	16102.85	PASS	AB=0.750;AC=49;AF=0.875;AN=56;BaseQRankSum=1.904;DP=302;FS=62.222;HRun=0;HaplotypeScore=82.8503;InbreedingCoeff=0.4351;MQ=31.60;MQ0=50;MQRankSum=-6.950;QD=72.54;ReadPosRankSum=-2.862;VQSLOD=1.2873;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,2:11:16.30:608,16,0	1/1:1,0:1:3.01:120,3,0	0/0:25,0:1:3.01:0,3,145	0/0:24,0:2:3.01:0,3,137	1/1:8,3:9:15.05:790,15,0	1/1:5,3:10:6.02:262,6,0	1/1:5,0:5:9.03:359,9,0	1/1:7,0:5:9.03:273,9,0	1/1:7,6:12:18.06:1250,18,0	1/1:11,3:14:30.09:1664,30,0	1/1:6,1:9:12.04:485,12,0	1/1:3,2:6:3.01:196,3,0	1/1:5,2:7:15.05:1072,15,0	1/1:3,0:1:3.01:120,3,0	1/1:4,3:9:9.03:491,9,0	1/1:3,1:6:9.03:515,9,0	0/0:31,0:31:72.20:0,72,3392	0/1:2,1:3:99:372,0,112	1/1:22,2:8:15.05:752,15,0	1/1:4,2:6:6.02:188,6,0	1/1:4,0:3:9.03:202,9,0	1/1:5,3:8:18.06:1250,18,0	1/1:12,4:16:27.09:1309,27,0	1/1:6,0:6:8.99:430,9,0	1/1:4,4:10:9.03:605,9,0	1/1:12,1:12:24.08:1421,24,0	1/1:6,1:7:12.04:825,12,0	1/1:6,0:6:9.03:545,9,0
chr10	78893454	.	AAAAAG	A	1360.97	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-0.092;DP=365;FS=11.671;HRun=0;HaplotypeScore=74.6284;InbreedingCoeff=0.7864;MQ=63.23;MQ0=7;MQRankSum=-3.493;QD=20.31;ReadPosRankSum=0.269;VQSLOD=1.7327;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:26.01:0,26,153	0/0:5,0:5:6.02:0,6,141	0/0:24,0:11:17.70:0,18,228	0/0:20,0:3:2.74:0,3,12	0/0:17,0:16:18.42:0,18,204	0/0:7,0:7:21.07:0,21,307	0/0:13,0:13:32.76:0,33,398	0/0:28,0:27:60.59:0,61,954	0/0:14,0:14:38.49:0,38,560	0/0:10,0:10:11.59:0,12,174	0/0:11,0:11:21.40:0,21,315	1/1:6,1:7:8.91:94,9,0	1/1:9,5:12:0.78:233,1,0	1/1:11,2:12:21.95:216,22,0	0/0:7,0:7:12.03:0,12,236	0/0:8,0:8:11.96:0,12,151	0/0:18,0:18:53.35:0,53,1061	0/0:23,0:22:57.13:0,57,637	0/0:11,0:11:26.67:0,27,483	0/0:18,0:16:32.37:0,32,441	0/0:8,0:8:3.48:0,3,38	1/1:7,3:10:26.69:302,27,0	1/1:5,6:11:4.73:273,5,0	1/1:6,6:12:27.48:410,27,0	0/0:16,0:16:26.93:0,27,463	0/0:14,0:14:35.92:0,36,481	0/0:6,0:4:9.49:0,9,166	0/0:6,0:6:12.04:0,12,284
chr10	78893510	.	GT	G	2664.15	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.694;DP=438;FS=5.655;HRun=4;HaplotypeScore=54.6780;InbreedingCoeff=0.9670;MQ=84.49;MQ0=0;MQRankSum=-4.089;QD=28.34;ReadPosRankSum=2.540;VQSLOD=3.2752;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:42.14:0,42,586	0/0:3,0:3:9.02:0,9,111	0/0:19,0:19:51.13:0,51,662	0/0:15,0:15:45.04:0,45,596	0/0:22,0:22:60.20:0,60,838	0/0:13,0:13:39.08:0,39,506	0/0:21,0:21:51.13:0,51,692	0/0:23,0:23:60.19:0,60,811	0/0:16,0:16:48.16:0,48,671	0/0:14,0:14:39.13:0,39,545	0/0:13,0:13:39.13:0,39,540	1/1:0,13:13:39.12:467,39,0	1/1:0,13:13:33.10:395,33,0	1/1:2,20:22:54.15:630,54,0	0/0:11,0:11:33.07:0,33,439	0/0:10,0:10:27.09:0,27,378	0/0:17,0:17:48.16:0,48,672	0/0:31,0:31:90.30:0,90,1254	0/0:16,0:16:45.14:0,45,607	0/0:15,0:15:42.14:0,42,584	0/0:10,0:10:30.10:0,30,420	1/1:0,14:14:36.11:427,36,0	1/1:2,13:15:33.10:394,33,0	1/1:1,16:17:45.14:539,45,0	0/0:19,0:19:42.14:0,42,587	0/0:16,0:16:48.16:0,48,671	0/0:18,0:17:54.18:0,54,756	0/0:2,0:2:6.02:0,6,84
chr10	78893632	.	A	AACACACAC	15446.21	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-0.370;DP=562;FS=2.229;HRun=0;HaplotypeScore=149.1214;InbreedingCoeff=0.5592;MQ=55.74;MQ0=3;MQRankSum=-6.136;QD=30.83;ReadPosRankSum=-0.969;VQSLOD=4.3559;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:22:21.05:641,21,0	1/1:4,2:6:3.01:100,3,0	0/1:30,0:20:48.64:49,0,166	0/0:20,0:16:21.20:0,21,365	1/1:10,4:17:6.02:245,6,0	1/1:11,0:25:27.06:462,27,0	1/1:18,0:33:39.12:776,39,0	1/1:21,0:21:27.05:476,27,0	1/1:10,0:22:30.10:684,30,0	1/1:10,3:11:9.03:218,9,0	1/1:9,6:16:15.04:520,15,0	1/1:18,0:18:30.07:702,30,0	1/1:12,12:24:33.11:1361,33,0	1/1:25,4:31:54.17:1656,54,0	1/1:17,8:30:27.08:965,27,0	1/1:10,6:19:36.12:1264,36,0	0/0:41,0:41:84.17:0,84,1868	1/1:11,0:15:14.38:186,14,0	1/1:12,1:13:18.06:589,18,0	1/1:9,7:17:9.02:273,9,0	1/1:6,4:13:2.14:74,2,0	1/1:13,6:19:21.07:759,21,0	1/1:6,7:13:18.05:597,18,0	1/1:17,0:17:14.84:486,15,0	1/1:9,3:15:15.05:498,15,0	1/1:15,7:22:35.32:1057,35,0	1/1:8,6:13:18.06:683,18,0	1/1:4,0:4:5.99:123,6,0
chr10	78893778	.	GCAA	G	732.19	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=7.721;DP=862;FS=12.162;HRun=0;HaplotypeScore=165.1161;InbreedingCoeff=0.2902;MQ=65.63;MQ0=11;MQRankSum=-9.163;QD=5.51;ReadPosRankSum=0.077;VQSLOD=2.3058;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:27:5.48:0,5,148	0/0:15,0:14:39.08:0,39,722	0/0:50,0:39:93.03:0,93,1537	0/0:31,0:23:65.50:0,65,1222	0/0:31,0:31:63.15:0,63,1239	0/1:18,0:18:0.57:1,0,218	0/1:25,0:24:4.11:4,0,282	0/0:34,0:33:90.21:0,90,1593	0/0:11,0:10:10.59:0,11,157	0/0:55,0:54:99:0,138,2694	0/0:29,0:29:63.16:0,63,1215	0/0:29,0:28:25.47:0,25,422	0/1:30,0:28:18.20:18,0,220	0/1:39,0:38:24.52:25,0,246	0/0:51,0:50:99:0,111,2187	0/0:51,0:49:99:0,115,2220	0/0:50,0:49:99:0,132,2579	1/1:13,8:20:57.17:802,57,0	0/0:16,0:16:42.97:0,43,736	0/0:24,0:22:54.08:0,54,932	0/0:46,0:43:99:0,105,2071	0/0:17,0:16:24.89:0,25,297	0/0:17,0:15:22.47:0,22,177	0/0:44,0:40:51.72:0,52,612	0/0:26,0:24:59.57:0,60,1026	0/0:31,0:31:90.13:0,90,1781	0/0:28,0:27:63.20:0,63,1273	0/0:13,0:13:39.13:0,39,815
chr10	78893790	.	GCAA	G	5329.10	PASS	AB=0.707;AC=17;AF=0.304;AN=56;BaseQRankSum=3.976;DP=1057;FS=4.982;HRun=0;HaplotypeScore=175.5625;InbreedingCoeff=0.4929;MQ=51.72;MQ0=63;MQRankSum=-0.438;QD=16.81;ReadPosRankSum=7.625;VQSLOD=4.0953;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,18:22:30.10:441,30,0	0/0:20,0:17:45.15:0,45,837	0/0:36,1:26:31.73:0,32,535	0/0:29,0:21:44.67:0,45,652	0/0:48,0:43:87.44:0,87,1526	1/1:7,10:15:18.06:261,18,0	1/1:7,15:19:18.06:271,18,0	0/0:50,0:39:99:0,99,1689	1/1:7,6:11:3.01:45,3,0	0/0:70,0:65:99:0,174,2839	0/0:34,0:34:74.94:0,75,1259	0/1:28,12:35:99:752,0,145	1/1:25,15:36:0.70:881,1,0	0/1:18,28:43:99:771,0,255	0/0:80,0:68:99:0,141,2563	0/0:65,0:58:86.25:0,86,2273	0/0:58,0:53:99:0,121,2046	1/1:15,8:22:22.24:514,22,0	0/0:32,0:29:65.95:0,66,1014	0/0:34,0:30:51.40:0,51,808	0/0:57,0:48:96.13:0,96,1698	0/1:13,6:16:54.91:300,0,55	0/1:9,10:15:71.11:205,0,71	0/1:32,19:43:99:890,0,437	0/0:38,0:34:81.10:0,81,1199	0/0:38,0:35:95.73:0,96,1762	0/0:35,0:29:74.58:0,75,1437	0/0:15,0:13:36.12:0,36,758
chr10	78893817	.	G	GCAA	3920.44	PASS	AB=0.913;AC=20;AF=0.400;AN=50;BaseQRankSum=-1.156;DP=1084;FS=13.532;HRun=0;HaplotypeScore=179.3612;InbreedingCoeff=-0.3669;MQ=37.31;MQ0=211;MQRankSum=-5.047;QD=5.07;ReadPosRankSum=2.440;VQSLOD=2.0617;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:14:18.04:0,18,225	0/1:10,8:15:99:152,0,103	./.	./.	0/1:42,2:37:76.95:77,0,438	0/0:15,0:10:0.89:0,1,2	0/0:22,0:10:3.02:0,3,7	0/1:56,3:42:99:233,0,492	./.	0/1:63,5:57:99:442,0,466	0/1:35,5:35:99:136,0,132	0/1:49,0:33:18.24:18,0,704	0/1:47,0:34:66.42:66,0,569	0/0:60,0:45:3.31:0,3,1005	0/1:79,10:71:99:451,0,564	0/1:59,7:56:99:491,0,366	0/0:67,0:40:63.85:0,64,878	0/0:32,0:19:42.05:0,42,555	0/1:23,1:19:74.54:75,0,176	1/1:36,2:30:11.53:227,12,0	0/1:49,4:37:80.26:80,0,374	0/1:27,0:18:4.42:4,0,267	0/1:22,0:15:35.55:36,0,222	0/0:59,0:40:46.54:0,47,910	0/1:31,4:29:99:143,0,268	0/1:14,18:25:19.85:820,0,20	0/1:43,1:29:99:124,0,483	1/1:14,3:13:22.24:346,22,0
chr10	78893826	.	A	AG	88.66	PASS	AC=4;AF=0.080;AN=50;BaseQRankSum=2.098;DP=990;FS=14.684;HRun=0;HaplotypeScore=162.7229;InbreedingCoeff=0.8770;MQ=35.17;MQ0=251;MQRankSum=-1.372;QD=3.28;ReadPosRankSum=-2.352;VQSLOD=2.3053;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:10:21.07:0,21,291	0/0:16,0:13:20.94:0,21,221	./.	./.	0/0:40,0:32:74.80:0,75,929	1/1:9,1:4:3.01:41,3,0	1/1:14,3:4:12.02:149,12,0	0/0:52,0:35:98.72:0,99,1287	./.	0/0:57,0:45:99:0,128,1318	0/0:31,0:26:48.60:0,49,519	0/0:48,0:29:81.12:0,81,1070	0/0:45,0:29:62.91:0,63,840	0/0:58,0:42:98.89:0,99,1306	0/0:89,0:68:99:0,121,1231	0/0:61,0:50:99:0,100,919	0/0:72,0:39:77.35:0,77,1020	0/0:31,0:17:42.14:0,42,591	0/0:16,0:10:26.77:0,27,309	0/0:33,0:24:29.29:0,29,264	0/0:49,0:32:53.64:0,54,666	0/0:25,0:16:34.35:0,34,446	0/0:21,0:12:28.20:0,28,348	0/0:64,0:40:85.49:0,85,1067	0/0:30,0:22:50.71:0,51,594	0/0:29,0:23:64.55:0,65,580	0/0:41,0:25:57.51:0,58,680	0/0:16,0:11:32.64:0,33,251
chr10	78893829	.	G	GCAA	6426.18	PASS	AB=0.929;AC=25;AF=0.543;AN=46;BaseQRankSum=-4.658;DP=966;FS=17.936;HRun=0;HaplotypeScore=153.6271;InbreedingCoeff=-0.4905;MQ=34.09;MQ0=268;MQRankSum=-2.977;QD=7.88;ReadPosRankSum=-5.788;VQSLOD=1.0801;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:7:1.08:19,1,0	0/1:13,1:11:64.60:149,0,65	./.	./.	0/1:33,4:30:99:366,0,193	./.	./.	1/1:51,0:35:38.20:381,38,0	./.	0/1:44,10:40:99:1170,0,181	0/1:26,1:22:34.04:408,0,34	0/1:45,2:28:99:106,0,485	0/1:43,1:28:39.76:40,0,326	0/1:55,4:41:99:125,0,555	0/1:72,19:68:99:954,0,333	0/1:50,12:49:99:1055,0,172	0/0:75,0:38:40.18:0,40,761	0/0:34,0:17:27.49:0,27,375	0/1:14,1:9:92.05:121,0,92	1/1:12,18:21:24.01:326,24,0	0/1:49,1:33:51.56:233,0,52	0/1:23,1:15:66.49:73,0,66	0/1:20,1:11:98.07:98,0,114	0/1:62,1:40:99:102,0,637	0/1:25,2:19:83:285,0,83	1/1:25,0:19:31.07:174,31,0	0/1:36,6:25:99:207,0,235	0/1:13,0:8:1.27:35,0,1
chr10	78893841	.	G	GCAA	3742.18	PASS	AB=0.958;AC=19;AF=0.432;AN=44;BaseQRankSum=-0.554;DP=892;FS=3.537;HRun=0;HaplotypeScore=139.9721;InbreedingCoeff=-0.5393;MQ=31.44;MQ0=308;MQRankSum=-1.432;QD=5.38;ReadPosRankSum=-6.389;VQSLOD=0.1546;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:14,0:10:1.39:1,0,106	./.	./.	0/1:29,0:21:89.33:89,0,192	./.	./.	1/1:10,21:26:46.69:898,47,0	./.	0/1:48,2:35:99:329,0,196	0/1:22,1:18:52.19:124,0,52	0/1:44,3:24:99:271,0,325	0/1:40,3:23:99:189,0,169	0/1:52,3:35:99:382,0,349	0/1:82,0:56:99:228,0,407	0/1:55,2:43:99:252,0,239	0/0:73,0:30:26.30:0,26,565	0/0:36,0:14:21:0,21,259	0/1:16,0:8:11.28:11,0,72	0/1:27,0:17:9.94:57,0,10	0/1:48,2:28:30.71:31,0,90	0/1:18,3:13:48.55:162,0,49	0/1:15,4:9:44.37:178,0,44	0/1:63,6:41:99:443,0,410	0/1:23,0:15:84.59:85,0,114	0/0:19,0:12:10.44:0,10,149	0/1:39,0:21:11.90:12,0,314	0/0:10,0:5:8.96:0,9,68
chr10	78893853	.	G	GCAA	1689.02	PASS	AB=0.944;AC=17;AF=0.405;AN=42;BaseQRankSum=1.527;DP=861;FS=9.220;HRun=0;HaplotypeScore=120.8999;InbreedingCoeff=-0.5260;MQ=28.08;MQ0=366;MQRankSum=-5.970;QD=2.80;ReadPosRankSum=-0.962;VQSLOD=1.8097;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:11,0:7:9.03:0,9,134	./.	./.	0/1:27,0:17:78.66:79,0,184	./.	./.	1/1:26,0:19:25.15:207,25,0	./.	0/1:36,4:24:99:265,0,196	0/1:18,1:14:38.05:48,0,38	0/1:47,2:22:81.57:82,0,309	0/1:39,2:19:37.69:38,0,149	0/1:48,6:32:43.09:43,0,348	0/1:70,10:51:99:280,0,320	0/1:51,7:40:99:251,0,316	0/0:78,0:20:17.29:0,17,428	0/0:40,0:11:5.95:0,6,69	0/1:15,0:5:25.07:25,0,44	0/1:18,2:10:6.89:57,0,7	0/1:41,4:24:19.69:20,0,80	0/1:16,2:11:31.41:179,0,31	0/1:19,0:8:40.59:102,0,41	0/1:71,2:37:99:121,0,394	0/1:20,0:10:27.14:27,0,78	0/0:16,0:8:6.02:0,6,85	0/0:36,2:19:2.57:0,3,290	./.
chr10	78893865	.	G	GCAA	1005.73	PASS	AB=0.965;AC=17;AF=0.425;AN=40;BaseQRankSum=-0.670;DP=820;FS=0.000;HRun=0;HaplotypeScore=87.7296;InbreedingCoeff=-0.4355;MQ=24.66;MQ0=402;MQRankSum=-6.554;QD=1.80;ReadPosRankSum=1.105;VQSLOD=1.5251;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:3:9.02:0,9,116	./.	./.	0/0:23,0:12:8.64:0,9,55	./.	./.	1/1:13,2:8:6.02:126,6,0	./.	0/1:33,0:15:55.78:98,0,56	1/1:14,0:9:2.22:7,2,0	0/1:44,3:15:98.99:99,0,124	0/1:37,1:14:25.12:52,0,25	0/1:46,0:23:54.79:55,0,145	0/1:74,1:42:99:159,0,222	0/1:57,1:38:31.67:32,0,244	0/0:87,0:22:20.78:0,21,234	0/0:37,0:6:5.95:0,6,57	0/1:14,1:4:26.09:97,0,26	0/1:17,0:9:6.80:19,0,7	0/1:44,6:22:20.88:128,0,21	0/1:17,1:9:22.41:106,0,22	0/1:16,1:7:41.80:62,0,42	0/1:74,1:35:57.69:58,0,197	0/0:17,0:9:3.90:0,4,47	./.	0/1:39,2:18:38.55:39,0,215	./.
chr10	78893877	.	G	GCAA	374.56	PASS	AB=0.975;AC=20;AF=0.556;AN=36;BaseQRankSum=-4.231;DP=764;FS=8.536;HRun=0;HaplotypeScore=64.9820;InbreedingCoeff=-0.1116;MQ=22.47;MQ0=431;MQRankSum=-0.541;QD=0.80;ReadPosRankSum=0.672;VQSLOD=0.5546;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:14,0:5:2.99:24,3,0	./.	./.	1/1:13,0:2:5.95:42,6,0	./.	1/1:26,0:8:1.72:4,2,0	1/1:8,0:3:1.82:5,2,0	0/1:49,0:14:52.52:65,0,53	0/1:38,0:12:26.85:30,0,27	0/1:45,0:21:34.30:34,0,37	0/1:64,0:30:19.73:20,0,43	0/0:51,0:31:8.29:0,8,41	0/0:84,0:17:7.32:0,7,48	./.	1/1:15,0:3:4.17:21,4,0	0/0:16,0:7:3:0,3,25	1/1:44,2:15:10.63:114,11,0	0/1:15,0:7:26.29:46,0,26	0/1:18,0:7:0.45:14,0,0	0/1:62,14:37:60.44:60,0,66	0/0:12,0:4:3.01:0,3,33	./.	0/1:36,1:15:15.69:16,0,31	./.
chr10	78893889	.	G	GCAA	79.88	PASS	AB=0.988;AC=7;AF=0.175;AN=40;BaseQRankSum=-2.173;DP=672;FS=24.467;HRun=0;HaplotypeScore=54.3688;InbreedingCoeff=-0.1008;MQ=21.51;MQ0=413;MQRankSum=-2.631;QD=0.29;ReadPosRankSum=0.449;VQSLOD=-0.4032;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:1:3:0,3,25	./.	./.	0/0:9,0:4:2.99:0,3,23	./.	./.	./.	./.	0/1:22,0:6:21.55:22,0,40	0/0:10,0:3:1.25:0,1,3	0/0:41,0:10:14.72:0,15,200	0/0:34,1:7:12.04:0,12,167	0/0:35,0:14:14.34:0,14,185	0/1:46,2:16:20.38:20,0,81	0/0:41,0:21:12.02:0,12,149	0/1:80,0:17:25.83:26,0,193	0/0:35,2:4:2.44:0,2,28	0/0:13,0:3:6.01:0,6,65	0/0:14,0:5:6.02:0,6,85	0/1:43,1:17:63.40:63,0,155	0/0:21,0:9:12.01:0,12,138	0/0:13,1:5:3:0,3,25	0/1:66,0:28:32.66:33,0,62	0/0:11,0:3:3.01:0,3,42	1/1:15,0:2:3:26,3,0	0/0:29,0:8:3.01:0,3,43	./.
chr10	78893911	.	CA	C	79.44	PASS	AC=2;AF=0.045;AN=44;BaseQRankSum=-2.517;DP=684;FS=2.067;HRun=2;HaplotypeScore=81.7978;InbreedingCoeff=0.6106;MQ=30.55;MQ0=327;MQRankSum=-0.714;QD=7.22;ReadPosRankSum=-1.321;VQSLOD=0.4648;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,6:7:12.04:164,12,0	0/0:6,0:3:9.03:0,9,139	./.	./.	0/0:14,0:8:18.06:0,18,280	./.	./.	./.	./.	0/0:28,0:13:25.51:0,26,280	0/0:14,0:8:11.97:0,12,136	0/0:35,0:12:36.11:0,36,545	0/0:30,0:9:27.09:0,27,423	0/0:30,0:19:48.15:0,48,738	0/0:50,0:20:41.74:0,42,557	0/0:39,0:22:36.10:0,36,513	0/0:76,0:28:59.79:0,60,915	0/0:40,0:14:36.12:0,36,565	0/0:14,0:6:18:0,18,213	0/0:15,0:3:6.02:0,6,96	0/0:43,0:20:34.34:0,34,490	0/0:16,0:6:18.05:0,18,265	0/0:13,0:3:9.03:0,9,144	0/0:67,0:37:59.67:0,60,879	0/0:10,0:3:6.02:0,6,93	0/0:15,0:4:10.85:0,11,138	0/0:23,0:12:24.08:0,24,349	0/0:3,0:2:6.01:0,6,57
chr10	78893913	.	G	GCAA	920.15	PASS	AB=0.987;AC=11;AF=0.250;AN=44;BaseQRankSum=-0.258;DP=699;FS=0.000;HRun=0;HaplotypeScore=95.4444;InbreedingCoeff=0.4775;MQ=31.27;MQ0=320;MQRankSum=-4.108;QD=4.36;ReadPosRankSum=-0.708;VQSLOD=2.0450;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:8:11.92:0,12,109	0/0:6,0:3:7.84:0,8,89	./.	./.	0/0:16,0:10:18.03:0,18,209	./.	./.	./.	./.	1/1:26,4:14:29.96:411,30,0	1/1:12,3:10:12.92:203,13,0	0/0:34,0:12:36.11:0,36,517	0/0:29,0:9:13.03:0,13,345	0/0:32,0:21:51.12:0,51,694	0/1:49,2:21:30.54:31,0,323	0/0:42,0:24:39.08:0,39,450	0/1:74,0:28:14:14,0,724	0/0:39,1:14:35.79:0,36,492	0/0:18,0:8:13.73:0,14,153	0/0:15,0:3:6.02:0,6,79	0/0:48,0:24:23.54:0,24,371	0/0:16,0:6:18.05:0,18,250	0/0:12,0:3:9.03:0,9,135	0/0:66,0:38:0.29:0,0,695	0/0:10,0:3:6.02:0,6,81	1/1:10,4:5:15.04:280,15,0	0/1:23,0:12:31.08:31,0,172	1/1:3,0:2:6.02:100,6,0
chr10	78893923	.	CA	C	572.69	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=-4.839;DP=773;FS=2.079;HRun=2;HaplotypeScore=97.2858;InbreedingCoeff=0.8212;MQ=34.73;MQ0=289;MQRankSum=-3.874;QD=9.09;ReadPosRankSum=-1.871;VQSLOD=0.6998;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:11:20.56:0,21,292	0/0:7,0:4:12.02:0,12,167	./.	0/0:2,0:1:3.01:0,3,45	0/0:20,0:13:24.08:0,24,377	1/1:3,4:6:12.04:166,12,0	1/1:21,9:9:20.86:291,21,0	./.	1/1:20,6:6:18.06:250,18,0	0/0:35,0:18:38.32:0,38,388	0/0:18,0:13:20.98:0,21,253	0/0:34,0:16:48.16:0,48,758	0/0:30,0:14:42.13:0,42,633	0/0:35,0:26:69.24:0,69,1091	0/0:54,0:24:54.17:0,54,830	0/0:46,0:28:54.18:0,54,847	0/0:71,0:33:81.23:0,81,1217	0/0:39,0:17:45.13:0,45,688	0/0:36,0:14:36.95:0,37,492	0/0:13,0:3:6.02:0,6,96	0/0:51,0:32:54.18:0,54,841	0/0:21,0:11:33.11:0,33,517	0/0:14,0:4:12.04:0,12,189	0/0:61,0:40:77.29:0,77,1185	0/0:11,0:3:6.02:0,6,96	0/0:20,0:9:27.02:0,27,330	0/0:24,0:14:27.09:0,27,421	0/0:4,0:3:9.01:0,9,111
chr10	78893928	.	ACAACAACAG	A	7125.85	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=-7.189;DP=808;FS=9.455;HRun=0;HaplotypeScore=132.4660;InbreedingCoeff=0.7899;MQ=36.62;MQ0=267;MQRankSum=0.072;QD=17.38;ReadPosRankSum=1.376;VQSLOD=3.1564;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:16:33.11:0,33,455	1/1:7,0:4:12.04:232,12,0	0/0:3,0:1:3.01:0,3,39	0/0:6,0:4:11.23:0,11,113	1/1:22,0:14:24.01:488,24,0	0/0:7,0:6:12.04:0,12,165	0/0:32,0:13:33.11:0,33,453	1/1:38,7:6:17.90:212,18,0	0/0:30,0:11:33.11:0,33,447	1/1:36,0:19:37.53:651,38,0	0/1:20,0:14:20.17:359,0,20	0/0:33,0:18:54.18:0,54,742	0/0:31,0:15:45.15:0,45,611	0/0:35,0:28:78.26:0,78,1066	1/1:53,0:26:63.21:1313,63,0	1/1:43,0:28:54.19:1207,54,0	0/0:70,0:35:64.05:0,64,1095	0/1:38,0:17:16.23:16,0,534	1/1:35,0:14:42:643,42,0	1/1:13,0:3:6.02:134,6,0	1/1:61,0:41:50.45:1127,50,0	0/0:23,0:12:36.12:0,36,495	0/0:13,0:5:15.05:0,15,206	0/0:65,0:44:44.17:0,44,1055	1/1:14,0:5:9.03:195,9,0	0/0:22,0:11:33.11:0,33,447	1/1:23,0:14:27.04:548,27,0	0/0:6,0:5:15.04:0,15,178
chr10	78893937	.	G	GCAA	7336.24	PASS	AB=0.755;AC=24;AF=0.429;AN=56;BaseQRankSum=-5.895;DP=856;FS=14.829;HRun=0;HaplotypeScore=115.6093;InbreedingCoeff=0.8303;MQ=40.91;MQ0=220;MQRankSum=1.714;QD=16.64;ReadPosRankSum=1.020;VQSLOD=3.6819;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:21:45.11:0,45,623	1/1:5,3:6:12.04:216,12,0	0/0:8,0:6:18.05:0,18,230	0/0:9,0:7:20.25:0,20,220	1/1:6,22:22:42.06:676,42,0	0/0:7,0:7:15.05:0,15,224	0/0:28,0:15:35.75:0,36,537	1/1:42,0:7:17.90:212,18,0	0/0:31,0:17:51.15:0,51,729	1/1:18,22:21:45.09:719,45,0	0/1:7,15:18:18.06:395,0,18	0/0:33,0:20:60.19:0,60,880	0/0:31,0:17:45.13:0,45,640	0/0:40,0:33:90.30:0,90,1318	1/1:32,20:27:63.22:1266,63,0	1/1:11,34:34:54.19:1137,54,0	0/0:61,2:37:62.38:0,62,1230	0/1:32,3:19:29.35:29,0,621	1/1:20,16:16:48.04:705,48,0	1/1:11,4:5:12.01:186,12,0	1/1:17,49:49:51.13:1072,51,0	0/0:24,0:14:36.12:0,36,541	0/0:16,0:7:21.05:0,21,293	0/0:61,0:42:56.45:0,56,1158	1/1:7,11:12:9.03:183,9,0	0/0:32,0:19:48.14:0,48,660	1/1:4,16:16:27.09:539,27,0	0/0:6,0:5:15.05:0,15,183
chr10	78894530	.	ATTGACAG	A	529.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.337;DP=585;FS=11.136;HRun=0;HaplotypeScore=128.1294;InbreedingCoeff=0.9746;MQ=84.37;MQ0=0;MQRankSum=-4.809;QD=37.79;ReadPosRankSum=-0.979;VQSLOD=2.6764;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:24.08:622,24,0	0/0:5,0:5:15.05:0,15,598	0/0:20,0:20:51.16:0,51,1837	0/0:15,0:15:45.15:0,45,1570	0/0:29,0:29:84.27:0,84,3217	0/0:14,0:14:39.13:0,39,1552	0/0:14,0:14:42.14:0,42,1680	0/0:44,0:44:99:0,108,4163	0/0:17,0:17:48.14:0,48,1652	0/0:27,0:27:81.28:0,81,3109	0/0:25,0:25:75.26:0,75,2917	0/0:24,0:24:63.22:0,63,2427	0/0:18,0:18:51.17:0,51,1980	0/0:16,0:16:48.16:0,48,1916	0/0:26,0:26:72.25:0,72,2742	0/0:17,0:17:48.16:0,48,1920	0/0:25,0:25:72.25:0,72,2766	0/0:18,0:18:54.19:0,54,2102	0/0:23,0:23:66.18:0,66,2354	0/0:27,0:27:81.26:0,81,2968	0/0:27,0:27:81.26:0,81,3124	0/0:17,0:17:48.16:0,48,1849	0/0:14,0:14:42.14:0,42,1679	0/0:16,0:16:45.15:0,45,1800	0/0:24,0:23:72.25:0,72,2845	0/0:30,0:30:84.29:0,84,3296	0/0:32,0:32:96.33:0,96,3831	0/0:7,0:7:18.06:0,18,717
chr10	78895118	.	CA	C	9382.65	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=4.850;DP=457;FS=9.848;HRun=1;HaplotypeScore=66.8634;InbreedingCoeff=0.9834;MQ=78.68;MQ0=0;MQRankSum=-0.496;QD=39.42;ReadPosRankSum=1.638;VQSLOD=5.1130;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:33.07:436,33,0	1/1:0,9:9:21.07:293,21,0	0/0:10,0:10:29.73:0,30,367	0/0:13,0:12:35.89:0,36,500	1/1:0,22:22:63.17:855,63,0	0/0:20,0:20:54.18:0,54,863	0/0:8,0:8:24.06:0,24,357	1/1:0,30:30:87.29:1215,87,0	0/0:14,0:14:39.12:0,39,600	1/1:0,27:27:81.19:1089,81,0	1/1:0,23:23:63.21:879,63,0	0/0:14,0:14:42.14:0,42,671	0/0:19,0:19:57.19:0,57,907	0/0:14,0:14:42.12:0,42,646	1/1:0,14:14:42.14:586,42,0	1/1:0,19:19:54.18:754,54,0	0/0:21,0:21:63.21:0,63,1001	0/0:17,0:17:51.17:0,51,815	1/1:0,11:11:33.08:436,33,0	1/1:0,33:33:96.32:1338,96,0	1/1:0,6:6:18.06:251,18,0	0/0:2,0:2:6.02:0,6,96	0/0:15,0:15:45.12:0,45,670	0/0:12,0:12:36.11:0,36,551	1/1:0,12:12:30.10:419,30,0	0/0:28,0:28:84.27:0,84,1301	1/1:0,20:20:60.20:833,60,0	0/0:12,0:12:36.06:0,36,501
chr10	78895320	.	ATTAT	A	8972.57	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=12.430;DP=372;FS=3.625;HRun=0;HaplotypeScore=65.5611;InbreedingCoeff=0.9658;MQ=66.92;MQ0=0;MQRankSum=-1.644;QD=44.20;ReadPosRankSum=0.978;VQSLOD=5.1147;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:9:18.06:336,18,0	1/1:1,5:6:15.05:280,15,0	0/0:5,0:5:12.04:0,12,256	0/0:4,0:4:6.02:0,6,143	1/1:1,12:13:30.06:504,30,0	0/0:8,0:8:24.08:0,24,610	0/0:8,0:8:24.08:0,24,640	1/1:3,23:26:69.22:1255,69,0	0/0:13,0:13:30.52:0,31,952	1/1:2,17:19:48.14:863,48,0	1/1:0,11:11:33.10:565,33,0	0/0:17,0:17:48.16:0,48,1278	0/0:8,0:8:21.06:0,21,475	0/0:13,0:13:39.13:0,39,1035	1/1:2,22:24:45.15:807,45,0	1/1:1,16:17:45.15:839,45,0	0/0:19,0:19:54.13:0,54,1283	0/0:17,0:17:45.09:0,45,1013	1/1:3,17:20:51.14:898,51,0	1/1:1,16:17:48.16:895,48,0	1/1:0,10:9:24.08:408,24,0	0/0:4,0:4:12.04:0,12,320	0/0:6,0:6:15.05:0,15,400	0/0:6,0:6:15.04:0,15,345	1/1:1,6:7:15.05:280,15,0	0/0:18,0:18:48.16:0,48,1276	1/1:3,21:24:57.19:1044,57,0	0/0:23,0:23:63.22:0,63,1663
chr10	78896732	.	T	TAA	5080.90	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=3.611;DP=525;FS=3.229;HRun=2;HaplotypeScore=103.3306;InbreedingCoeff=0.7976;MQ=60.96;MQ0=13;MQRankSum=-2.727;QD=19.77;ReadPosRankSum=-5.253;VQSLOD=0.8032;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:49.27:408,49,0	1/1:7,1:8:17.67:157,18,0	0/0:35,0:21:59.89:0,60,558	0/0:41,0:23:46.27:0,46,512	1/1:14,0:14:26.88:218,27,0	0/0:13,0:13:16.03:0,16,180	0/0:21,0:21:26.27:0,26,260	1/1:30,0:30:84.05:816,84,0	0/1:20,0:19:21.37:21,0,108	1/1:11,2:13:27.46:326,27,0	1/1:4,0:4:8.23:62,8,0	0/1:9,0:9:4.31:4,0,61	0/0:13,0:13:32.72:0,33,244	0/1:12,0:11:1.62:2,0,139	1/1:9,6:15:42.03:475,42,0	1/1:14,4:18:49.24:471,49,0	0/0:31,0:31:80.61:0,81,755	0/0:16,0:16:34.46:0,34,236	1/1:15,2:17:47.82:457,48,0	1/1:13,4:17:41.87:417,42,0	1/1:20,3:21:44.71:413,45,0	0/0:18,0:17:42.01:0,42,437	0/0:18,0:18:7.27:0,7,374	0/0:30,0:29:83.93:0,84,873	1/1:8,2:10:20.90:167,21,0	0/0:20,0:20:7.29:0,7,329	1/1:20,5:24:66.01:668,66,0	0/0:12,0:12:17.99:0,18,226
chr10	78896733	.	A	AACACAC	4206.11	PASS	AB=1.000;AC=39;AF=0.780;AN=50;BaseQRankSum=3.650;DP=574;FS=5.282;HRun=0;HaplotypeScore=167.3746;InbreedingCoeff=0.5405;MQ=57.76;MQ0=13;MQRankSum=-2.070;QD=10.70;ReadPosRankSum=-3.152;VQSLOD=1.9640;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:10.46:183,10,0	1/1:8,0:8:11.97:132,12,0	./.	./.	0/1:13,0:13:6.14:64,0,6	1/1:9,0:16:9.01:106,9,0	1/1:18,8:27:3.01:96,3,0	1/1:35,0:35:31.44:227,31,0	1/1:20,3:22:25.79:568,26,0	1/1:14,0:14:7.01:236,7,0	1/1:6,0:6:2.68:11,3,0	1/1:9,0:17:5.15:155,5,0	1/1:16,0:16:6:61,6,0	1/1:13,1:13:10.79:188,11,0	0/1:18,0:18:1.39:406,0,1	1/1:18,0:18:13.82:233,14,0	0/0:27,0:30:32.32:0,32,548	1/1:18,0:18:7.73:109,8,0	1/1:20,0:20:23.81:227,24,0	1/1:17,0:17:20.31:232,20,0	0/1:24,0:22:10.87:102,0,11	0/0:18,0:17:17.05:0,17,196	0/0:16,0:19:16.39:0,16,408	0/0:27,0:30:43.30:0,43,629	./.	1/1:23,0:23:28.63:323,29,0	1/1:26,0:25:38.30:420,38,0	1/1:14,0:14:9.37:126,9,0
chr10	78896774	.	GCA	G	4309.58	PASS	AB=0.964;AC=24;AF=0.429;AN=56;BaseQRankSum=-0.096;DP=567;FS=12.345;HRun=0;HaplotypeScore=141.1697;InbreedingCoeff=0.8188;MQ=52.00;MQ0=12;MQRankSum=2.647;QD=16.32;ReadPosRankSum=0.959;VQSLOD=4.5961;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,3:23:9.52:293,10,0	1/1:8,2:10:14.15:136,14,0	0/0:22,0:9:27.08:0,27,393	0/0:16,0:8:12.09:0,12,296	1/1:10,4:14:10.80:92,11,0	0/0:14,0:14:18.05:0,18,243	0/0:22,0:22:30.10:0,30,453	1/1:29,1:29:23.48:686,23,0	0/0:22,0:21:35.70:0,36,459	1/1:20,7:27:26.46:681,26,0	1/1:8,1:9:20.43:241,20,0	0/0:20,0:20:29.95:0,30,401	0/0:12,0:12:21.07:0,21,318	0/0:17,0:16:36.12:0,36,548	1/1:15,7:22:19.48:394,19,0	0/1:17,0:17:13.11:208,0,13	0/0:34,0:34:82.27:0,82,1116	0/0:19,0:19:36.74:0,37,483	1/1:18,2:20:11.30:341,11,0	1/1:16,2:18:10.32:278,10,0	0/1:24,2:24:6.56:344,0,7	0/0:19,0:19:30.10:0,30,480	0/0:18,0:18:39.10:0,39,608	0/0:34,0:33:62.13:0,62,949	1/1:11,6:16:9.03:108,9,0	0/0:28,0:28:66.16:0,66,944	1/1:25,6:30:22.61:507,23,0	0/0:6,0:6:9.03:0,9,134
chr10	78896776	.	A	ACG	2831.58	PASS	AB=0.891;AC=21;AF=0.375;AN=56;BaseQRankSum=5.589;DP=565;FS=4.647;HRun=0;HaplotypeScore=147.4160;InbreedingCoeff=0.6216;MQ=53.09;MQ0=11;MQRankSum=0.687;QD=10.69;ReadPosRankSum=1.977;VQSLOD=3.5425;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:24:6.25:167,6,0	0/1:8,2:10:3.61:126,0,4	0/0:22,0:9:27.04:0,27,368	0/0:17,0:9:24.05:0,24,318	1/1:15,0:15:10.50:83,10,0	0/0:15,0:15:11.62:0,12,206	0/0:20,0:20:29.93:0,30,422	0/1:31,0:30:32.37:243,0,32	0/0:21,0:20:28.12:0,28,275	1/1:25,1:26:44.66:389,45,0	1/1:9,0:9:20.33:137,20,0	0/0:19,0:19:27.33:0,27,355	0/0:12,0:12:26.94:0,27,352	0/0:17,0:16:40.03:0,40,508	1/1:17,5:23:35.58:426,36,0	0/1:14,2:17:0.95:280,0,1	0/0:36,0:36:84.27:0,84,1242	0/0:20,0:20:46.63:0,47,549	0/1:19,2:21:10.65:261,0,11	1/1:14,3:17:39.38:337,39,0	1/1:25,0:23:0.75:122,1,0	0/0:19,0:19:42.08:0,42,556	0/0:17,0:17:29.75:0,30,495	0/0:32,0:31:78.06:0,78,1106	1/1:17,0:16:7.56:35,8,0	0/0:27,0:27:75.04:0,75,919	0/1:25,5:30:6.53:419,0,7	0/0:6,0:6:14.89:0,15,145
chr10	78898815	.	CAAG	C	7899.26	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=13.021;DP=596;FS=8.013;HRun=0;HaplotypeScore=115.0016;InbreedingCoeff=0.9807;MQ=84.48;MQ0=0;MQRankSum=-6.445;QD=34.95;ReadPosRankSum=0.467;VQSLOD=5.4121;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:27:57.19:914,57,0	1/1:0,4:4:12.04:192,12,0	0/0:23,0:22:60.13:0,60,1110	0/0:30,0:30:81.28:0,81,1689	1/1:4,13:17:36.12:550,36,0	0/0:26,0:26:69.07:0,69,1383	0/0:27,0:27:81.28:0,81,1768	1/1:1,31:32:87.25:1318,87,0	0/0:34,0:34:93.24:0,93,1942	1/1:1,17:18:51.10:721,51,0	1/1:0,10:10:24.08:344,24,0	0/0:35,0:35:87.19:0,87,1731	0/0:24,0:24:63.22:0,63,1384	0/0:18,0:18:39.13:0,39,844	1/1:0,20:20:42.14:674,42,0	1/1:5,18:23:42.09:644,42,0	0/0:33,0:33:93.31:0,93,1965	0/0:26,0:26:72.25:0,72,1520	1/1:0,10:10:30.07:435,30,0	1/1:3,15:18:39.13:603,39,0	1/1:1,20:20:42.14:651,42,0	0/0:25,0:25:66.22:0,66,1331	0/0:14,0:14:39.13:0,39,825	0/0:20,0:20:54.18:0,54,1144	1/1:1,10:11:27.09:433,27,0	0/0:33,0:33:90.31:0,90,1929	1/1:3,11:14:27.09:419,27,0	0/0:2,0:2:6.02:0,6,132
chr10	78898855	.	AAC	A	568.44	PASS	AB=0.952;AC=11;AF=0.212;AN=52;BaseQRankSum=2.199;DP=603;FS=15.392;HRun=0;HaplotypeScore=139.3598;InbreedingCoeff=0.3228;MQ=55.46;MQ0=11;MQRankSum=-2.481;QD=3.09;ReadPosRankSum=0.498;VQSLOD=1.9335;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:14.86:0,15,111	0/0:5,0:8:8.97:0,9,73	./.	0/0:32,0:20:2.97:0,3,20	./.	0/0:23,1:25:19.47:0,19,610	0/1:34,2:36:48.67:49,0,490	0/0:28,0:27:11.52:0,12,104	0/1:27,2:29:19.24:19,0,438	0/0:16,0:16:21.81:0,22,202	0/1:9,0:9:0:0,0,0	1/1:15,10:26:26.34:209,26,0	1/1:12,8:21:17.88:181,18,0	1/1:8,13:23:26.30:208,26,0	0/0:19,0:19:2.96:0,3,26	0/0:19,0:19:5.97:0,6,47	0/0:38,0:38:63.19:0,63,923	0/0:19,0:30:58.07:0,58,490	0/0:13,0:11:5.92:0,6,38	0/0:14,0:13:3:0,3,25	0/0:27,0:26:9:0,9,90	0/1:23,2:25:44.18:44,0,404	0/1:12,0:12:7.71:8,0,124	0/0:36,0:35:66.15:0,66,936	0/0:13,0:13:2.41:0,2,24	0/0:26,0:24:16.28:0,16,355	0/0:12,0:13:11.95:0,12,108	0/0:3,0:3:3.01:0,3,44
chr10	78898921	.	G	GAC	1573.72	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-2.333;DP=851;FS=3.417;HRun=0;HaplotypeScore=279.1292;InbreedingCoeff=0.7145;MQ=47.63;MQ0=22;MQRankSum=-3.201;QD=26.67;ReadPosRankSum=-0.433;VQSLOD=3.5630;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:62.07:0,62,522	0/1:9,0:9:11.95:12,0,186	0/0:49,0:16:12.78:0,13,193	0/0:40,0:17:10.61:0,11,202	0/0:18,0:17:29.60:0,30,301	0/0:32,0:32:65.89:0,66,708	0/0:32,0:32:68.88:0,69,733	0/0:41,0:39:61.57:0,62,866	0/0:48,0:47:89.71:0,90,962	0/0:24,0:23:19.50:0,20,573	0/0:13,0:13:23.76:0,24,249	0/0:48,0:48:57.44:0,57,910	0/0:23,0:24:33.92:0,34,454	0/0:37,0:36:61.80:0,62,612	0/0:22,0:21:50.49:0,50,472	0/0:18,0:18:41.78:0,42,371	0/0:55,0:55:99:0,129,1561	0/0:38,0:39:74.43:0,74,1010	0/0:17,0:15:33.09:0,33,394	0/0:16,0:16:14.80:0,15,214	0/0:47,0:48:85.17:0,85,672	0/0:31,0:31:52.52:0,53,497	0/0:25,0:25:30.03:0,30,375	0/0:46,0:46:84.07:0,84,974	0/0:19,0:19:4.51:0,5,278	1/1:17,22:37:57.93:1308,58,0	0/0:21,0:21:24.97:0,25,555	1/1:3,8:11:24.08:381,24,0
chr10	78898925	.	C	CAG	734.37	PASS	AB=0.933;AC=5;AF=0.089;AN=56;BaseQRankSum=3.006;DP=877;FS=1.177;HRun=0;HaplotypeScore=293.0101;InbreedingCoeff=0.2694;MQ=46.66;MQ0=18;MQRankSum=-2.769;QD=8.64;ReadPosRankSum=1.334;VQSLOD=3.0030;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:62.62:0,63,824	0/1:11,1:12:56.97:57,0,242	0/0:51,0:17:29.92:0,30,365	0/0:45,0:19:34.29:0,34,368	0/0:16,2:17:29.81:0,30,416	0/0:30,0:30:69.12:0,69,980	0/0:36,0:36:78.12:0,78,1051	0/0:41,0:38:98.97:0,99,1299	0/0:49,0:48:99:0,99,1361	0/0:24,0:22:22.61:0,23,749	0/0:12,1:13:26.81:0,27,358	0/0:50,0:50:72.44:0,72,1256	0/0:25,0:25:49.51:0,50,645	0/0:38,0:37:60.10:0,60,831	0/0:21,0:20:50.83:0,51,669	0/0:16,0:16:42.12:0,42,563	0/0:59,0:59:99:0,150,2104	0/0:41,0:41:99:0,110,1443	0/0:14,0:12:33.11:0,33,495	0/0:13,3:16:15.97:0,16,296	0/0:49,0:48:99:0,102,1199	0/0:35,0:35:65.72:0,66,825	0/0:24,1:25:33.03:0,33,481	0/0:46,0:46:93.24:0,93,1320	0/1:18,3:21:14.35:14,0,356	0/1:40,0:38:28.65:592,0,29	0/0:21,0:21:24.75:0,25,762	1/1:12,0:12:5.90:184,6,0
chr10	78898932	.	A	ACT	809.49	PASS	AB=0.930;AC=4;AF=0.071;AN=56;BaseQRankSum=2.642;DP=908;FS=1.874;HRun=0;HaplotypeScore=305.7848;InbreedingCoeff=0.4645;MQ=47.82;MQ0=17;MQRankSum=-4.173;QD=9.87;ReadPosRankSum=3.912;VQSLOD=3.1033;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:62.69:0,63,839	0/0:12,0:12:6.87:0,7,254	0/0:53,0:17:44.51:0,45,484	0/0:44,0:19:34.94:0,35,426	0/0:19,0:18:29.65:0,30,420	0/0:31,1:32:69.22:0,69,983	0/0:41,0:41:90.36:0,90,1118	0/0:41,0:34:69.19:0,69,1197	0/0:52,0:52:99:0,105,1418	0/0:23,1:22:26.43:0,26,762	0/0:13,0:13:27.06:0,27,365	0/0:48,2:50:41.96:0,42,1209	0/1:23,2:25:0.78:1,0,596	0/0:37,2:38:66.19:0,66,900	0/0:20,2:21:50.65:0,51,681	0/0:16,2:18:42.12:0,42,574	0/0:59,0:59:99:0,133,2095	0/0:40,0:40:77.52:0,78,1425	0/0:15,0:13:36.12:0,36,529	0/0:17,2:19:23.29:0,23,316	0/0:48,0:47:95.78:0,96,1174	0/0:38,2:40:63.40:0,63,781	0/0:23,3:26:33.09:0,33,481	0/0:46,0:46:96.25:0,96,1346	0/0:22,0:22:29.46:0,29,422	0/1:40,3:41:80.67:667,0,81	0/0:22,0:22:15.34:0,15,767	1/1:12,2:13:10.46:241,10,0
chr10	78898975	.	C	CAT	1515.73	PASS	AB=0.809;AC=10;AF=0.179;AN=56;BaseQRankSum=7.580;DP=728;FS=64.759;HRun=0;HaplotypeScore=242.7669;InbreedingCoeff=-0.1745;MQ=39.07;MQ0=11;MQRankSum=-8.642;QD=6.04;ReadPosRankSum=-0.461;VQSLOD=0.5271;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,4:15:1.05:0,1,3	0/0:4,0:4:8.70:0,9,64	0/0:32,0:7:18.06:0,18,270	0/0:37,0:11:15.95:0,16,202	0/0:13,8:21:8.37:0,8,114	0/0:23,6:29:26.86:0,27,385	0/0:38,2:40:65.98:0,66,961	0/1:31,11:28:99:495,0,354	0/0:37,7:44:50.79:0,51,760	0/1:17,7:23:99:257,0,369	0/0:10,5:15:0.37:0,0,1	0/1:26,9:35:67.86:68,0,511	0/1:19,7:26:68.73:69,0,403	0/1:24,5:28:27.22:27,0,360	0/0:14,4:17:8.38:0,8,89	0/0:12,3:15:1.84:0,2,6	0/0:35,1:36:26.01:0,26,1116	0/1:26,2:28:46.71:47,0,1007	0/1:6,2:6:58.62:77,0,59	0/0:14,6:20:8.05:0,8,144	0/0:29,1:29:21.05:0,21,283	0/0:28,16:44:43.60:0,44,618	0/0:18,10:28:24.01:0,24,337	0/0:28,2:30:33.85:0,34,546	0/0:7,10:17:6.81:0,7,30	0/1:26,9:35:99:411,0,901	0/1:7,5:12:96.01:96,0,103	0/1:10,2:12:99:109,0,290
chr10	78902892	.	AT	A	627.16	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=6.220;DP=589;FS=15.698;HRun=1;HaplotypeScore=55.0753;InbreedingCoeff=0.6057;MQ=72.68;MQ0=0;MQRankSum=-0.312;QD=18.45;ReadPosRankSum=-1.069;VQSLOD=2.2730;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:21.03:718,21,0	0/0:13,0:13:39.12:0,39,583	0/1:13,0:12:7.37:7,0,338	0/0:11,0:11:3.85:0,4,195	0/0:28,0:28:84.26:0,84,1269	0/0:18,0:18:54.18:0,54,834	0/0:14,0:14:42.12:0,42,633	0/0:31,0:31:93.28:0,93,1376	0/0:20,0:20:60.17:0,60,893	0/0:24,0:24:72.23:0,72,1089	0/0:25,0:24:75.24:0,75,1150	0/0:22,0:22:66.16:0,66,982	0/0:24,0:24:72.22:0,72,1082	0/0:17,0:17:51.13:0,51,751	0/0:26,0:26:78.25:0,78,1196	0/0:25,0:25:75.20:0,75,1086	0/0:23,0:23:66.20:0,66,1007	0/0:23,0:22:66.21:0,66,1009	0/0:22,0:22:66.13:0,66,962	0/0:33,0:33:99:0,99,1548	0/0:19,0:19:54.16:0,54,820	0/0:27,0:27:81.24:0,81,1214	0/0:27,0:27:81.23:0,81,1220	0/0:11,0:11:33.11:0,33,509	0/0:17,0:17:51.14:0,51,752	0/0:25,0:25:75.23:0,75,1131	0/0:25,0:25:75.24:0,75,1147	0/0:5,0:5:15.05:0,15,235
chr10	78905153	.	GTC	G	1516.35	PASS	AB=0.919;AC=14;AF=0.250;AN=56;BaseQRankSum=1.168;DP=668;FS=0.523;HRun=0;HaplotypeScore=178.6167;InbreedingCoeff=-0.0339;MQ=54.50;MQ0=7;MQRankSum=-3.952;QD=5.05;ReadPosRankSum=0.485;VQSLOD=3.1724;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:20.80:0,21,219	0/0:5,0:5:2.99:0,3,24	0/1:20,2:14:14.12:14,0,396	0/0:27,0:18:36.74:0,37,517	0/1:14,0:14:9.93:32,0,10	0/0:27,0:27:12.87:0,13,86	0/0:22,0:22:9.01:0,9,106	0/1:34,15:48:99:574,0,125	0/0:28,0:28:21.50:0,22,203	0/1:23,2:23:39.74:242,0,40	1/1:20,0:20:2.80:25,3,0	0/0:22,0:22:15.55:0,16,126	0/0:18,0:18:15.71:0,16,130	0/0:19,0:19:8.88:0,9,66	0/1:28,4:32:86.77:87,0,106	0/1:7,0:21:18.77:43,0,19	0/0:36,0:36:96.33:0,96,1641	0/0:16,0:16:10.48:0,10,124	0/1:24,2:26:91.60:322,0,92	1/1:13,1:14:12.65:113,13,0	0/1:33,3:35:19.60:55,0,20	0/0:23,0:23:33.10:0,33,556	0/0:24,0:22:36.07:0,36,599	0/0:21,0:21:63.22:0,63,1072	0/1:9,1:10:18.34:24,0,18	0/0:35,1:36:20.89:0,21,470	0/1:27,2:29:98.83:143,0,99	0/0:2,0:2:6.02:0,6,84
chr10	78905155	.	C	CTCTG	4183.11	PASS	AB=0.860;AC=15;AF=0.268;AN=56;BaseQRankSum=0.794;DP=662;FS=4.289;HRun=0;HaplotypeScore=186.9748;InbreedingCoeff=0.0959;MQ=53.01;MQ0=7;MQRankSum=-5.668;QD=14.28;ReadPosRankSum=-0.654;VQSLOD=3.3528;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:21:0,21,275	0/0:5,0:5:2.99:0,3,24	0/1:20,0:11:22.73:23,0,426	0/0:30,0:19:37.22:0,37,571	1/1:10,3:13:6:88,6,0	0/0:26,0:26:15:0,15,179	0/0:20,0:20:9.03:0,9,123	0/1:50,0:49:99:1187,0,130	0/0:27,0:27:26.51:0,27,352	0/1:15,9:22:15.33:817,0,15	1/1:13,6:19:2.71:25,3,0	0/0:22,0:22:21.06:0,21,287	0/0:19,0:19:20.77:0,21,297	0/0:19,0:19:18.06:0,18,279	0/1:25,7:32:78.96:185,0,79	0/1:16,3:19:14.04:176,0,14	0/0:34,0:34:96.80:0,97,1740	0/0:17,0:17:11.91:0,12,171	0/1:23,6:29:61.17:755,0,61	1/1:8,6:14:15.04:173,15,0	0/1:32,3:34:21.17:55,0,21	0/0:24,0:24:33.10:0,33,594	0/0:24,0:22:35.65:0,36,638	0/0:22,0:22:63.22:0,63,1132	0/1:7,2:9:6.17:91,0,6	0/0:36,0:36:11.96:0,12,799	0/1:19,9:28:53.53:610,0,54	0/0:2,0:2:6.02:0,6,84
chr10	78905161	.	GTCTCTCTGTCTCTCTCTC	G	6485.61	PASS	AB=0.929;AC=19;AF=0.352;AN=54;BaseQRankSum=3.047;DP=647;FS=4.621;HRun=0;HaplotypeScore=261.9790;InbreedingCoeff=0.7333;MQ=51.54;MQ0=9;MQRankSum=-4.394;QD=27.84;ReadPosRankSum=2.663;VQSLOD=3.5248;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,36:39:15.05:350,15,0	0/0:6,0:6:3:0,3,29	0/0:20,0:10:18.96:0,19,361	0/0:26,0:17:1.78:0,2,313	0/0:10,0:13:5.05:0,5,59	1/1:0,26:26:15.05:589,15,0	1/1:1,20:21:6.02:251,6,0	0/0:39,0:52:1.28:0,1,1293	1/1:2,23:25:14.57:700,15,0	0/0:11,0:20:36.32:0,36,1622	0/0:11,0:17:0.47:0,0,2	1/1:1,19:20:18.06:734,18,0	1/1:1,18:19:15.52:718,16,0	1/1:1,16:17:15.05:757,15,0	0/0:22,0:31:21.44:0,21,684	0/0:13,0:16:15.05:0,15,600	0/0:37,0:36:82.70:0,83,3929	1/1:3,15:18:5.93:169,6,0	0/0:18,0:26:51.21:0,51,1422	0/1:8,0:13:8.57:20,0,9	0/0:30,0:32:11.52:0,12,129	0/0:24,0:24:35.83:0,36,1858	0/0:21,0:19:36.11:0,36,2182	0/0:21,0:21:60.21:0,60,3222	0/0:7,0:9:9.03:0,9,161	1/1:3,30:34:78.20:2199,78,0	0/0:20,0:30:50.08:0,50,1552	./.
chr10	78905167	.	CTG	C	3535.95	PASS	AB=0.845;AC=36;AF=0.667;AN=54;BaseQRankSum=9.393;DP=633;FS=2.053;HRun=0;HaplotypeScore=163.0421;InbreedingCoeff=0.4961;MQ=50.10;MQ0=11;MQRankSum=-6.452;QD=7.03;ReadPosRankSum=1.899;VQSLOD=3.3732;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:37:14.72:90,15,0	1/1:0,6:6:3.01:46,3,0	0/0:17,0:8:20.54:0,21,151	0/1:32,0:17:57.51:58,0,118	0/0:5,7:12:4.78:0,5,18	1/1:26,0:26:14.65:87,15,0	1/1:20,0:20:5.88:36,6,0	0/1:29,22:48:26.15:697,0,26	1/1:23,0:23:13.86:81,14,0	1/1:19,4:21:51.90:432,52,0	0/1:6,12:18:0.01:0,0,0	1/1:19,0:19:17.37:99,17,0	1/1:18,0:18:14.57:84,15,0	1/1:16,0:16:14.51:81,15,0	1/1:11,18:29:23.58:259,24,0	0/1:17,0:17:15.56:63,0,16	0/0:36,0:35:76.50:0,76,1303	0/1:18,0:18:5:11,0,5	1/1:21,5:25:9.33:378,9,0	1/1:7,7:14:8.51:49,9,0	1/1:8,28:35:11.38:165,11,0	0/0:24,0:24:35.85:0,36,556	0/0:21,0:19:28.29:0,28,654	0/0:20,0:20:49.25:0,49,932	0/1:7,3:9:3.22:36,0,3	1/1:32,0:32:71.92:417,72,0	1/1:15,15:30:8.58:367,9,0	./.
chr10	78905169	.	G	GTCTCTC	3521.52	PASS	AB=0.986;AC=33;AF=0.611;AN=54;BaseQRankSum=4.533;DP=631;FS=7.109;HRun=0;HaplotypeScore=182.1840;InbreedingCoeff=0.3253;MQ=50.97;MQ0=12;MQRankSum=-4.243;QD=7.32;ReadPosRankSum=-4.250;VQSLOD=0.3402;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:36:5.83:36,6,0	1/1:6,0:6:3.01:46,3,0	./.	0/1:34,0:17:40.06:66,0,40	1/1:11,1:12:2.94:18,3,0	0/1:26,0:26:30.21:40,0,30	1/1:20,0:20:5.88:36,6,0	1/1:50,0:47:65.84:611,66,0	0/1:23,0:23:7.54:28,0,8	1/1:22,1:22:49.62:627,50,0	0/1:16,2:18:0:1,0,0	0/1:19,0:19:14.56:15,0,82	0/1:18,0:18:5.75:6,0,83	0/0:16,0:16:14.84:0,15,178	1/1:28,1:29:24.22:302,24,0	1/1:17,1:18:1.65:112,2,0	0/0:35,0:34:43.93:0,44,934	0/0:16,0:16:5.69:0,6,53	1/1:26,0:25:47.17:510,47,0	1/1:14,0:14:3.88:20,4,0	1/1:36,0:35:12.04:166,12,0	0/0:22,0:24:5.11:0,5,369	0/0:20,0:18:28.29:0,28,670	0/0:20,0:21:48.14:0,48,853	1/1:9,1:9:8.90:64,9,0	0/1:31,0:31:57.70:122,0,58	1/1:26,4:30:36.05:697,36,0	0/0:1,0:1:0:0,0,0
chr10	78907247	.	TG	T	10377.72	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.776;DP=778;FS=3.073;HRun=2;HaplotypeScore=75.1468;InbreedingCoeff=0.9997;MQ=78.06;MQ0=0;MQRankSum=-1.740;QD=37.06;ReadPosRankSum=3.234;VQSLOD=5.6421;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,51:51:99:1986,153,0	0/0:18,0:18:54.17:0,54,783	0/0:22,0:22:63.10:0,63,833	0/0:14,0:14:32.97:0,33,422	0/0:38,0:38:99:0,110,1598	1/1:0,20:20:60.20:779,60,0	1/1:0,27:27:75.24:974,75,0	0/0:30,0:30:84.24:0,84,1168	1/1:0,30:30:81.26:1051,81,0	0/0:30,0:30:90.30:0,90,1349	0/0:22,0:22:63.68:0,64,923	1/1:0,29:29:87.28:1129,87,0	1/1:0,35:35:99:1323,102,0	1/1:0,26:26:69.22:895,69,0	0/0:38,0:38:99:0,114,1686	0/0:31,0:31:87.29:0,87,1304	0/0:30,0:30:87.28:0,87,1281	1/1:0,20:20:57.19:740,57,0	0/0:26,0:26:75.25:0,75,1117	0/0:33,0:33:99:0,99,1482	0/0:22,0:22:63.20:0,63,922	0/0:25,0:25:69.23:0,69,1034	0/0:20,0:20:60.18:0,60,875	0/0:35,0:35:99:0,105,1569	0/0:29,0:29:87.28:0,87,1281	1/1:1,33:34:54.35:1189,54,0	0/0:35,0:35:99:0,105,1553	1/1:0,8:8:24.08:312,24,0
chr10	78908807	.	AT	A	15470.54	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=8.615;DP=660;FS=4.417;HRun=5;HaplotypeScore=72.8012;InbreedingCoeff=0.9875;MQ=87.10;MQ0=0;MQRankSum=-5.739;QD=29.30;ReadPosRankSum=2.270;VQSLOD=5.6229;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:93.20:1039,93,0	1/1:0,12:12:36.10:408,36,0	0/0:18,0:18:45.10:0,45,556	0/0:24,0:25:69.19:0,69,887	1/1:1,33:34:87.24:987,87,0	1/1:1,18:19:48.14:545,48,0	1/1:2,13:15:36.10:408,36,0	1/1:4,29:33:87.21:967,87,0	1/1:0,13:13:36.10:408,36,0	1/1:5,29:34:87.25:987,87,0	1/1:1,32:33:93.08:1037,93,0	1/1:1,25:26:63.18:714,63,0	1/1:0,29:29:78.22:885,78,0	1/1:1,22:23:60.17:680,60,0	1/1:1,21:22:54.15:613,54,0	1/1:3,26:29:66.19:749,66,0	0/0:21,0:21:63.21:0,63,862	1/1:1,21:22:22.13:640,22,0	1/1:6,13:19:39.08:430,39,0	1/1:0,28:28:78.12:855,78,0	1/1:2,31:33:93.27:1055,93,0	0/0:20,0:20:60.19:0,60,801	0/0:22,0:22:60.20:0,60,820	0/0:26,0:26:69.23:0,69,944	1/1:1,20:21:51.15:578,51,0	1/1:2,25:27:72.18:804,72,0	1/1:0,19:19:51.15:578,51,0	1/1:0,3:3:9.03:102,9,0
chr10	78909864	.	GC	G	3817.47	PASS	AC=48;AF=0.960;AN=50;BaseQRankSum=1.222;DP=244;FS=8.617;HRun=1;HaplotypeScore=108.5124;InbreedingCoeff=0.4359;MQ=25.64;MQ0=1;MQRankSum=-1.711;QD=16.45;ReadPosRankSum=1.711;VQSLOD=3.3816;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:3:8.93:66,9,0	1/1:0,3:3:5.99:48,6,0	0/0:6,0:1:3.01:0,3,42	./.	1/1:1,15:12:26.95:221,27,0	1/1:1,12:13:26.82:204,27,0	1/1:1,7:6:14.92:114,15,0	1/1:3,1:3:8.87:61,9,0	1/1:0,4:4:11.97:96,12,0	1/1:1,14:12:29.78:212,30,0	1/1:1,10:11:20.98:174,21,0	1/1:1,11:10:26.95:225,27,0	1/1:0,7:7:20.96:169,21,0	1/1:0,9:7:20.92:171,21,0	1/1:0,7:6:17.97:147,18,0	1/1:0,10:4:11.97:95,12,0	1/1:1,4:4:8.89:61,9,0	1/1:1,4:4:8.93:63,9,0	1/1:0,4:4:8.79:53,9,0	1/1:2,21:21:47.91:390,48,0	./.	1/1:0,12:8:23.90:187,24,0	1/1:1,13:12:32.96:279,33,0	1/1:0,3:2:5.94:43,6,0	1/1:1,14:13:29.93:239,30,0	1/1:2,10:9:26.81:207,27,0	1/1:0,16:16:35.91:295,36,0	./.
chr10	78909935	.	A	ATG	2530.02	PASS	AC=48;AF=1.000;AN=48;DP=239;FS=0.000;HRun=0;HaplotypeScore=92.1860;InbreedingCoeff=-0.0402;MQ=26.70;MQ0=0;QD=11.10;VQSLOD=2.8931;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:11:23.71:159,24,0	1/1:0,3:3:5.93:40,6,0	./.	./.	1/1:0,15:14:11.75:72,12,0	1/1:12,0:12:14.86:104,15,0	1/1:6,0:5:8.87:57,9,0	1/1:0,7:4:5.99:48,6,0	1/1:4,0:4:2.97:20,3,0	1/1:0,13:11:26.95:226,27,0	1/1:0,16:15:20.44:125,20,0	1/1:0,10:8:14.17:116,14,0	1/1:0,13:11:26.71:203,27,0	1/1:0,14:10:20.74:162,21,0	1/1:0,12:12:26.65:176,27,0	./.	1/1:0,9:8:17.91:152,18,0	1/1:0,3:2:5.97:44,6,0	1/1:0,3:3:9:80,9,0	1/1:0,10:9:5.92:39,6,0	./.	1/1:0,13:9:14.84:111,15,0	1/1:1,7:8:8.88:58,9,0	1/1:0,6:5:5.90:37,6,0	1/1:0,16:15:26.70:181,27,0	1/1:1,8:8:23.98:218,24,0	1/1:0,12:10:20.85:153,21,0	1/1:0,1:1:2.99:23,3,0
chr10	78910091	.	GA	G	1757.19	PASS	AB=0.595;AC=5;AF=0.089;AN=56;BaseQRankSum=-2.307;DP=823;FS=1.772;HRun=2;HaplotypeScore=134.2367;InbreedingCoeff=0.7399;MQ=44.41;MQ0=9;MQRankSum=1.225;QD=22.24;ReadPosRankSum=-1.821;VQSLOD=3.1039;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:87.15:0,87,1207	0/0:16,0:15:41.93:0,42,581	0/0:21,0:6:18.01:0,18,243	0/0:19,0:5:8.21:0,8,156	0/0:22,0:21:48.11:0,48,657	1/1:6,21:27:12.32:626,12,0	1/1:6,24:26:57.19:739,57,0	0/0:39,0:28:84.27:0,84,1187	0/1:7,15:22:38.54:518,0,39	0/0:32,0:28:81.27:0,81,1156	0/0:35,0:35:87.15:0,87,1169	0/0:34,0:32:84.25:0,84,1198	0/0:31,0:29:78.26:0,78,1167	0/0:42,0:38:99:0,105,1551	0/0:37,0:36:90.27:0,90,1241	0/0:31,0:28:78.17:0,78,1052	0/0:44,0:43:99:0,114,1681	0/0:31,0:31:75.25:0,75,1123	0/0:19,0:16:45.15:0,45,653	0/0:26,0:26:63.08:0,63,843	0/0:35,0:34:99:0,99,1390	0/0:28,0:28:66.12:0,66,914	0/0:29,0:28:72.16:0,72,1026	0/0:34,0:33:87.15:0,87,1226	0/0:13,0:13:39.09:0,39,542	0/0:43,0:39:99:0,114,1703	0/0:32,0:31:78.25:0,78,1108	0/0:10,0:10:27.09:0,27,404
chr10	78910824	.	T	TGTGA	3892.02	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=6.650;DP=661;FS=2.170;HRun=0;HaplotypeScore=122.1215;InbreedingCoeff=0.2333;MQ=62.60;MQ0=23;MQRankSum=-2.474;QD=12.32;ReadPosRankSum=-2.792;VQSLOD=3.0287;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:71.87:0,72,669	0/1:6,0:6:37.88:81,0,38	0/0:41,0:13:23.88:0,24,228	0/0:49,0:22:32.17:0,32,338	0/1:24,0:23:48.26:48,0,136	1/1:21,1:22:11.87:209,12,0	1/1:18,3:21:23.91:485,24,0	0/0:31,0:30:52.57:0,53,641	1/1:17,3:20:27.09:593,27,0	0/1:21,0:20:99:123,0,223	0/1:16,0:16:99:108,0,138	1/1:16,0:16:8.59:192,9,0	1/1:19,3:22:24.04:488,24,0	1/1:24,0:24:24.02:449,24,0	0/1:23,0:22:99:116,0,100	0/1:18,0:17:99:171,0,186	0/0:29,0:29:68.96:0,69,839	0/0:19,0:19:47.96:0,48,550	0/0:24,0:23:34.93:0,35,324	0/1:14,0:13:68.82:203,0,69	0/1:24,0:23:99:151,0,136	0/0:27,0:27:62.91:0,63,742	0/0:17,0:17:38.97:0,39,420	0/0:34,0:34:72.11:0,72,943	0/1:18,0:18:91.74:241,0,92	0/0:23,0:23:56.97:0,57,540	0/1:27,0:26:99:231,0,195	0/0:13,0:13:20.69:0,21,185
chr10	78910832	.	A	AGTGAGT	4402.61	PASS	AB=0.721;AC=21;AF=0.375;AN=56;BaseQRankSum=3.293;DP=704;FS=0.432;HRun=0;HaplotypeScore=143.6249;InbreedingCoeff=0.1849;MQ=58.38;MQ0=29;MQRankSum=-1.945;QD=12.13;ReadPosRankSum=2.359;VQSLOD=4.0017;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:34:68.95:0,69,785	0/1:2,0:7:36.07:36,0,54	0/0:41,0:11:23.84:0,24,228	0/0:48,0:18:35.18:0,35,368	0/1:21,0:24:7.15:7,0,145	1/1:3,22:25:12.04:290,12,0	1/1:7,15:26:26.92:672,27,0	0/0:28,0:27:21.60:0,22,629	0/1:6,16:25:2.97:757,0,3	0/1:15,0:23:99:156,0,243	0/1:17,0:18:41.98:42,0,156	1/1:3,12:19:9.03:302,9,0	1/1:5,15:25:27.01:594,27,0	1/1:4,18:27:23.37:750,23,0	0/1:10,0:23:92.37:92,0,127	0/1:16,1:21:99:178,0,216	0/0:30,0:31:75.02:0,75,1137	0/0:16,0:18:46.80:0,47,681	0/0:24,0:22:39.09:0,39,340	0/1:5,0:17:70.56:132,0,71	0/1:27,0:28:99:117,0,185	0/0:25,0:27:68.90:0,69,977	0/0:20,0:19:50.72:0,51,603	0/0:31,0:35:87.13:0,87,1344	0/1:10,0:25:96.50:118,0,97	0/0:18,0:25:42.95:0,43,585	0/1:13,0:23:99:159,0,196	0/0:3,0:8:20.63:0,21,226
chr10	78911089	.	A	ATTCAT	27321.67	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-12.640;DP=647;FS=5.060;HRun=0;HaplotypeScore=107.9369;InbreedingCoeff=0.9982;MQ=76.60;MQ0=0;MQRankSum=-11.122;QD=73.84;ReadPosRankSum=-0.580;VQSLOD=6.3554;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,29:37:87.26:2639,87,0	1/1:3,6:9:24.08:706,24,0	0/0:20,0:20:60.16:0,60,1094	0/0:24,0:24:43.57:0,44,1088	1/1:4,21:28:60.20:1775,60,0	1/1:4,23:29:78.27:2312,78,0	1/1:7,22:31:72.25:2173,72,0	1/1:6,15:26:69.23:1957,69,0	1/1:8,20:30:75.26:2303,75,0	1/1:3,11:15:45.14:1302,45,0	1/1:2,9:12:27.09:821,27,0	0/0:25,0:25:72.23:0,72,1497	0/0:20,0:20:57.19:0,57,1208	0/0:25,0:25:75.26:0,75,1592	1/1:3,25:30:78.27:2417,78,0	1/1:3,21:27:69.24:2116,69,0	0/0:26,0:26:75.21:0,75,1521	0/0:21,0:21:57.12:0,57,1109	1/1:13,12:27:60.18:1644,60,0	1/1:2,20:22:60.21:1850,60,0	1/1:4,17:23:54.19:1630,54,0	0/0:24,0:24:72.25:0,72,1562	0/0:17,0:17:48.16:0,48,1039	0/0:36,0:36:99:0,105,2190	1/1:0,13:13:39.13:1197,39,0	0/0:28,0:28:81.27:0,81,1720	1/1:3,6:11:18.06:478,18,0	0/0:11,0:11:24.08:0,24,517
chr10	78911520	.	CTAGT	C	6996	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.672;DP=539;FS=10.324;HRun=0;HaplotypeScore=93.8031;InbreedingCoeff=0.9702;MQ=76.85;MQ0=0;MQRankSum=-2.209;QD=50.70;ReadPosRankSum=2.529;VQSLOD=5.3259;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.32:0,93,2499	0/0:5,0:5:12.04:0,12,329	0/0:23,0:23:60.04:0,60,1452	0/0:10,0:10:8.93:0,9,481	0/0:16,0:16:48.16:0,48,1303	1/1:0,25:25:66.23:1279,66,0	1/1:2,21:23:54.19:1042,54,0	0/0:28,0:28:84.29:0,84,2230	1/1:2,18:20:54.19:1046,54,0	0/0:13,0:12:39.13:0,39,1069	0/0:12,0:12:36.11:0,36,897	1/1:0,24:24:69.24:1338,69,0	1/1:2,20:22:50.68:988,51,0	1/1:1,23:24:69.22:1304,69,0	0/0:26,0:26:78.27:0,78,2119	0/0:20,0:20:57.20:0,57,1562	0/0:23,0:23:69.24:0,69,1875	0/0:14,0:14:39.10:0,39,997	0/0:9,0:9:27.09:0,27,741	0/0:15,0:15:42.14:0,42,1148	0/0:32,0:32:93.32:0,93,2526	0/0:23,0:23:66.23:0,66,1773	0/0:12,0:12:36.12:0,36,985	0/0:26,0:26:78.27:0,78,2085	0/0:16,0:16:48.16:0,48,1315	0/0:20,0:20:60.21:0,60,1645	0/0:23,0:23:62.61:0,63,1724	0/0:3,0:3:9.03:0,9,247
chr10	78911739	.	C	CT	3451.82	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=2.131;DP=507;FS=4.504;HRun=8;HaplotypeScore=76.0681;InbreedingCoeff=0.6242;MQ=73.52;MQ0=0;MQRankSum=-0.979;QD=9.98;ReadPosRankSum=3.071;VQSLOD=2.2223;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.04:0,72,659	1/1:9,0:9:18.42:75,18,0	0/0:21,0:15:8.55:0,9,98	0/0:15,0:10:8.12:0,8,36	1/1:21,0:21:6.45:164,6,0	0/0:21,0:21:44.84:0,45,356	0/0:11,0:11:29.89:0,30,237	0/1:34,0:34:42.76:168,0,43	0/0:21,0:21:48.80:0,49,398	0/1:16,0:16:33.12:99,0,33	0/1:18,0:18:44.41:81,0,44	1/1:20,0:20:46.44:219,46,0	1/1:23,0:23:29.10:205,29,0	0/1:18,0:18:3.40:117,0,3	1/1:23,0:23:23.83:160,24,0	0/1:20,0:20:23.82:104,0,24	0/0:17,0:17:44.94:0,45,397	1/1:0,14:14:36.11:412,36,0	1/1:19,0:19:25.49:120,25,0	1/1:21,0:21:29.82:205,30,0	1/1:7,0:7:18.62:77,19,0	0/0:6,0:6:18.01:0,18,165	0/0:15,0:15:44.94:0,45,398	0/0:8,0:8:24.01:0,24,220	1/1:19,0:19:34.04:137,34,0	1/1:3,16:19:28.31:531,28,0	1/1:36,0:36:33:267,33,0	1/1:0,9:9:27.08:312,27,0
chr10	78911747	.	T	TA	9285.73	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-11.270;DP=525;FS=0.960;HRun=6;HaplotypeScore=56.6706;InbreedingCoeff=0.7691;MQ=70.57;MQ0=0;MQRankSum=2.910;QD=23.69;ReadPosRankSum=0.292;VQSLOD=4.2341;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.10:0,81,800	1/1:0,8:8:21.01:260,21,0	0/0:17,0:12:3.35:0,3,67	0/1:12,0:7:9.17:9,0,34	1/1:3,21:24:57.03:651,57,0	0/0:20,0:20:16.19:0,16,35	0/0:12,0:12:9.96:0,10,22	1/1:6,31:37:93.18:1048,93,0	0/1:20,0:20:2.51:3,0,19	1/1:4,15:19:45.12:535,45,0	1/1:4,12:16:33.10:409,33,0	1/1:1,18:19:51.16:630,51,0	1/1:1,21:22:57.18:705,57,0	1/1:2,19:21:42.13:520,42,0	1/1:1,21:22:51.16:631,51,0	1/1:4,17:21:42.13:520,42,0	0/0:18,0:18:45.01:0,45,437	1/1:16,0:16:30.86:123,31,0	1/1:1,18:19:54.11:618,54,0	1/1:2,19:21:57.15:687,57,0	1/1:0,7:7:21.07:260,21,0	0/0:8,0:8:21.02:0,21,206	0/0:17,0:17:42.07:0,42,418	0/0:10,0:10:30.04:0,30,292	1/1:2,18:20:39.12:483,39,0	0/1:20,0:20:9.74:70,0,10	1/1:5,34:39:84.26:1037,84,0	1/1:9,0:9:23.04:86,23,0
chr10	78911752	.	AAG	A	1524.76	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-4.035;DP=536;FS=2.723;HRun=0;HaplotypeScore=94.3701;InbreedingCoeff=0.8348;MQ=71.83;MQ0=0;MQRankSum=-0.528;QD=24.20;ReadPosRankSum=0.658;VQSLOD=4.2426;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.31:0,90,1631	0/0:10,0:10:27.90:0,28,246	0/0:20,0:14:17.64:0,18,225	0/1:12,0:7:16.78:17,0,70	0/0:27,0:27:78.10:0,78,815	1/1:1,19:20:39.13:582,39,0	1/1:1,12:13:24.08:358,24,0	0/0:40,0:40:45.06:0,45,1135	1/1:0,18:18:48.16:716,48,0	0/0:17,0:17:51.02:0,51,510	0/0:14,0:14:33.03:0,33,306	0/0:21,0:21:59.97:0,60,583	0/0:21,0:21:27.30:0,27,427	0/0:21,0:21:48.05:0,48,455	0/0:22,0:22:53.85:0,54,482	0/0:18,0:18:45.06:0,45,444	0/0:18,0:18:48.13:0,48,820	0/0:18,0:18:31.60:0,32,690	0/0:21,0:21:60.02:0,60,610	0/0:21,0:21:63.07:0,63,624	0/0:8,0:8:24.02:0,24,220	0/0:9,0:9:27.05:0,27,446	0/0:18,0:18:51.15:0,51,851	0/0:10,0:10:30.10:0,30,548	0/0:20,0:20:45.07:0,45,470	0/0:21,0:21:54.05:0,54,997	0/0:37,0:37:88.47:0,88,758	0/0:11,0:11:33.08:0,33,507
chr10	78915318	.	TTA	T	2955.56	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=13.403;DP=588;FS=1.047;HRun=0;HaplotypeScore=110.1502;InbreedingCoeff=0.6149;MQ=73.40;MQ0=0;MQRankSum=0.121;QD=6.89;ReadPosRankSum=-0.960;VQSLOD=3.1427;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.20:0,63,1057	1/1:11,0:11:7.25:103,7,0	0/1:7,0:7:8.82:9,0,219	0/0:10,0:10:13.08:0,13,207	1/1:34,1:35:86.80:375,87,0	0/1:20,0:20:14.30:14,0,233	0/0:11,0:11:28.87:0,29,198	1/1:26,0:26:49.88:295,50,0	0/0:29,0:29:43.09:0,43,413	1/1:33,1:34:69.44:375,69,0	1/1:28,0:28:58.09:221,58,0	0/1:18,0:18:20.38:20,0,134	0/1:15,0:15:72.56:73,0,115	0/1:16,0:16:46.29:46,0,156	1/1:17,0:17:39.93:139,40,0	1/1:17,0:17:27.45:95,27,0	0/0:19,0:19:54.18:0,54,945	1/1:27,0:27:54.53:189,55,0	1/1:17,1:18:24.43:171,24,0	1/1:38,1:39:87.29:352,87,0	1/1:28,0:28:59.76:207,60,0	0/0:23,0:23:66.19:0,66,1108	0/0:23,0:23:69.22:0,69,1188	0/0:21,0:21:60.18:0,60,1018	1/1:21,0:21:33.69:116,34,0	1/1:20,0:20:32.15:147,32,0	1/1:25,0:25:47.41:165,47,0	1/1:7,0:7:14.97:52,15,0
chr10	78915319	.	TA	T	12790.92	PASS	AB=0.970;AC=35;AF=0.625;AN=56;BaseQRankSum=1.293;DP=584;FS=0.324;HRun=1;HaplotypeScore=64.0773;InbreedingCoeff=0.6454;MQ=74.19;MQ0=0;MQRankSum=-0.262;QD=28.62;ReadPosRankSum=-2.241;VQSLOD=3.9955;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.16:0,63,823	1/1:2,9:11:25.27:389,25,0	0/0:8,0:8:13.68:0,14,179	0/0:10,0:10:9.58:0,10,150	1/1:1,34:35:99:1299,104,0	0/1:18,2:20:33.94:99,0,34	0/0:11,0:11:16.93:0,17,55	1/1:1,25:26:72.71:940,73,0	0/1:28,0:28:53.30:53,0,61	1/1:2,32:34:97.99:1230,98,0	1/1:0,28:28:72.11:938,72,0	0/1:17,0:17:2.84:119,0,3	0/1:14,0:14:11.16:82,0,11	0/1:15,1:16:6.57:121,0,7	1/1:0,17:17:48.16:670,48,0	1/1:0,17:17:33.11:460,33,0	0/0:19,0:19:54.18:0,54,751	1/1:0,27:27:66.22:919,66,0	1/1:6,12:18:48.65:639,49,0	1/1:1,38:39:99:1441,114,0	1/1:0,28:28:72.24:1004,72,0	0/0:23,0:23:66.19:0,66,887	0/0:23,0:23:69.21:0,69,945	0/0:21,0:21:63.16:0,63,826	1/1:0,21:21:40.69:548,41,0	1/1:1,19:20:54.74:791,55,0	1/1:0,24:24:57.19:795,57,0	1/1:0,7:7:18.06:251,18,0
chr10	78915856	.	C	CTA	2617.32	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.708;DP=806;FS=6.009;HRun=0;HaplotypeScore=90.2853;InbreedingCoeff=0.9996;MQ=80.73;MQ0=0;MQRankSum=-4.345;QD=46.74;ReadPosRankSum=1.075;VQSLOD=4.3676;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,1829	0/0:14,0:14:42.13:0,42,584	0/0:26,0:26:69.21:0,69,956	0/0:19,0:19:46.27:0,46,672	0/0:27,0:27:72.24:0,72,1028	0/0:26,0:25:78.26:0,78,1112	0/0:32,0:32:96.29:0,96,1333	0/0:36,0:36:99:0,99,1403	0/0:21,0:21:60.20:0,60,860	0/0:45,0:45:99:0,132,1891	0/0:35,0:35:99:0,99,1418	0/0:28,0:28:84.28:0,84,1204	0/0:33,0:33:96.30:0,96,1352	0/0:30,0:30:90.30:0,90,1290	0/0:47,0:47:99:0,138,1940	0/0:37,0:37:99:0,108,1547	0/0:26,0:26:78.26:0,78,1116	1/1:0,17:17:48.16:880,48,0	0/0:26,0:26:75.25:0,75,1075	0/0:33,0:33:93.31:0,93,1330	0/0:29,0:29:84.28:0,84,1204	0/0:35,0:35:99:0,102,1421	0/0:33,0:33:90.30:0,90,1290	0/0:25,0:25:66.22:0,66,946	0/0:18,0:18:54.17:0,54,756	1/1:2,26:28:78.24:1385,78,0	0/0:26,0:26:72.24:0,72,1031	1/1:0,9:11:27.09:495,27,0
chr10	78918580	.	TG	T	15456.73	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=15.350;DP=661;FS=1.693;HRun=1;HaplotypeScore=91.9792;InbreedingCoeff=0.9826;MQ=63.40;MQ0=0;MQRankSum=-0.502;QD=37.79;ReadPosRankSum=4.019;VQSLOD=5.3065;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,2076	1/1:0,8:8:24.08:336,24,0	0/0:32,0:32:96.29:0,96,1456	0/0:36,0:29:78.25:0,78,1191	1/1:0,27:27:78.17:1046,78,0	1/1:0,24:24:66.22:922,66,0	1/1:0,20:20:51.17:712,51,0	1/1:0,36:36:99:1444,108,0	1/1:0,16:16:45.15:629,45,0	1/1:0,24:24:72.24:998,72,0	1/1:0,20:20:60.20:839,60,0	1/1:0,24:24:66.22:922,66,0	1/1:0,20:20:54.17:754,54,0	1/1:0,25:25:60.20:837,60,0	1/1:0,25:25:69.23:964,69,0	1/1:0,18:18:42.14:586,42,0	0/0:36,0:36:99:0,108,1691	0/0:26,0:26:72.24:0,72,1136	1/1:0,15:15:45.13:593,45,0	1/1:0,23:23:69.14:920,69,0	1/1:0,28:28:72.20:985,72,0	0/0:13,0:13:39.10:0,39,573	0/0:15,0:15:45.14:0,45,696	0/0:28,0:28:84.17:0,84,1217	1/1:0,20:20:48.16:670,48,0	0/0:16,1:17:9.21:0,9,725	1/1:0,36:36:93.31:1300,93,0	0/0:3,0:3:9.03:0,9,144
chr10	78918725	.	T	TG	9572.49	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=19.536;DP=600;FS=19.215;HRun=3;HaplotypeScore=183.0882;InbreedingCoeff=0.9956;MQ=71.22;MQ0=0;MQRankSum=-18.332;QD=26.08;ReadPosRankSum=0.678;VQSLOD=2.4610;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1678	1/1:1,10:11:32.90:292,33,0	0/0:16,0:17:27.09:0,27,365	0/0:16,0:16:17.54:0,18,356	1/1:0,26:26:72.97:638,73,0	1/1:1,24:25:75.01:708,75,0	1/1:3,14:17:44.81:436,45,0	1/1:1,14:15:42.06:412,42,0	1/1:1,18:19:56.96:520,57,0	1/1:0,17:18:53.86:503,54,0	1/1:1,20:21:55.32:464,55,0	1/1:3,21:24:69.20:626,69,0	1/1:1,22:23:68.90:619,69,0	1/1:0,19:18:51.06:475,51,0	1/1:1,28:29:86.65:786,87,0	1/1:1,27:27:78.10:728,78,0	0/0:22,0:22:63.21:0,63,877	0/0:18,0:18:54.18:0,54,752	1/1:0,8:8:24.05:247,24,0	1/1:3,26:29:86.29:752,86,0	1/1:2,5:7:14.73:106,15,0	0/0:23,0:23:63.21:0,63,858	0/0:24,0:24:72.24:0,72,1003	0/0:24,0:24:72.23:0,72,990	1/1:2,21:23:66.07:616,66,0	0/0:29,1:30:60.54:0,61,1165	1/1:2,23:25:71.72:645,72,0	0/0:19,0:19:57.19:0,57,793
chr10	78918726	.	A	AAGG	20951.39	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=19.377;DP=655;FS=21.576;HRun=0;HaplotypeScore=184.4982;InbreedingCoeff=0.9929;MQ=68.94;MQ0=0;MQRankSum=-19.551;QD=50.12;ReadPosRankSum=-0.236;VQSLOD=3.7036;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,2223	1/1:2,11:13:36.12:659,36,0	0/0:17,0:17:33.55:0,34,542	0/0:16,0:16:10.55:0,11,515	1/1:2,26:28:75.15:1298,75,0	1/1:5,24:29:81.22:1440,81,0	1/1:7,14:21:57.13:958,57,0	1/1:7,14:21:57.18:989,57,0	1/1:3,18:21:60.21:1105,60,0	1/1:4,17:21:63.21:1109,63,0	1/1:4,20:24:69.19:1203,69,0	1/1:6,21:27:78.10:1366,78,0	1/1:4,22:26:78.22:1361,78,0	1/1:1,19:19:54.19:973,54,0	1/1:5,28:33:99:1772,99,0	1/1:2,27:28:81.26:1427,81,0	0/0:24,0:24:66.20:0,66,1192	0/0:18,0:18:54.17:0,54,971	1/1:4,8:12:30.10:549,30,0	1/1:5,27:32:96.33:1732,96,0	1/1:5,5:10:21.07:378,21,0	0/0:23,0:23:69.21:0,69,1223	0/0:24,0:24:72.25:0,72,1332	0/0:26,0:26:72.25:0,72,1335	1/1:3,21:24:72.23:1270,72,0	0/0:29,1:30:34.63:0,35,1555	1/1:2,24:26:75.26:1363,75,0	0/0:19,0:19:57.20:0,57,1063
chr10	78919350	.	CAG	C	16017.21	PASS	AB=0.912;AC=37;AF=0.661;AN=56;BaseQRankSum=4.547;DP=648;FS=11.127;HRun=0;HaplotypeScore=84.8691;InbreedingCoeff=0.9204;MQ=93.92;MQ0=2;MQRankSum=-4.090;QD=34.82;ReadPosRankSum=4.463;VQSLOD=6.9933;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.22:0,69,1258	1/1:0,12:12:24.08:353,24,0	0/0:30,0:30:79.73:0,80,1344	0/0:32,0:32:73.11:0,73,1104	1/1:1,27:28:66.22:969,66,0	1/1:0,26:26:66.22:971,66,0	1/1:0,20:20:48.16:706,48,0	1/1:0,26:26:78.23:1107,78,0	1/1:2,20:22:51.17:750,51,0	1/1:2,23:25:69.23:1012,69,0	1/1:1,26:26:69.23:1014,69,0	1/1:0,16:16:39.13:574,39,0	1/1:1,21:22:57.19:838,57,0	1/1:1,27:29:75.25:1101,75,0	1/1:0,24:24:66.22:971,66,0	1/1:1,18:18:45.15:662,45,0	0/0:20,0:20:60.13:0,60,1053	0/0:16,0:16:45.13:0,45,808	1/1:0,20:20:60.19:863,60,0	1/1:0,35:35:90.30:1324,90,0	1/1:0,22:22:51.17:750,51,0	0/0:18,0:18:48.16:0,48,888	0/0:23,0:23:66.21:0,66,1194	0/0:12,0:12:33.11:0,33,604	1/1:1,25:26:57.19:839,57,0	0/1:28,3:31:22.82:23,0,1398	1/1:0,30:30:81.27:1190,81,0	0/0:13,0:13:39.13:0,39,730
chr10	78921380	.	T	TA	12793.64	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=8.217;DP=660;FS=0.000;HRun=1;HaplotypeScore=91.3681;InbreedingCoeff=0.9841;MQ=51.76;MQ0=8;MQRankSum=3.763;QD=31.67;ReadPosRankSum=-0.217;VQSLOD=4.3270;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1441	1/1:0,4:3:9.03:135,9,0	0/0:27,0:19:51.15:0,51,627	0/0:23,0:9:24.04:0,24,292	1/1:0,32:31:90.26:1322,90,0	1/1:0,27:24:63.21:943,63,0	1/1:1,11:8:15.05:225,15,0	1/1:5,8:10:21.06:296,21,0	1/1:1,22:19:51.17:763,51,0	1/1:2,29:25:66.20:947,66,0	1/1:1,25:22:57.12:820,57,0	1/1:0,19:16:45.15:674,45,0	1/1:1,22:21:60.15:866,60,0	1/1:1,25:21:57.19:852,57,0	1/1:5,26:25:60.15:871,60,0	1/1:0,19:15:33.11:494,33,0	0/0:26,0:26:74.95:0,75,924	0/0:26,0:26:72.21:0,72,918	1/1:2,10:8:24.02:314,24,0	1/1:3,30:30:75.25:1123,75,0	1/1:0,6:5:15.05:225,15,0	0/0:17,0:17:45.15:0,45,581	0/0:28,0:28:84.27:0,84,1089	0/0:25,0:25:72.23:0,72,935	1/1:2,32:31:81.21:1187,81,0	0/0:23,1:24:24.23:0,24,797	1/1:2,29:26:18.82:737,19,0	0/0:22,0:21:60.19:0,60,779
chr10	78922762	.	TA	T	4965.48	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=7.980;DP=318;FS=24.688;HRun=7;HaplotypeScore=31.5054;InbreedingCoeff=0.9554;MQ=61.02;MQ0=0;MQRankSum=0.178;QD=27.59;ReadPosRankSum=-0.319;VQSLOD=2.7339;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39.12:0,39,483	1/1:0,3:3:6.01:61,6,0	0/0:4,0:4:12.04:0,12,145	0/0:2,0:2:4.83:0,5,43	1/1:3,13:16:39.08:398,39,0	1/1:0,6:6:15.03:153,15,0	1/1:0,7:7:18.04:184,18,0	1/1:4,26:30:78.17:795,78,0	1/1:0,5:5:15.03:153,15,0	1/1:0,13:13:39.08:392,39,0	1/1:0,9:9:27.06:276,27,0	0/0:9,0:9:24.06:0,24,289	0/0:9,0:9:27.09:0,27,340	0/0:13,0:13:39.12:0,39,491	1/1:1,9:10:21.04:214,21,0	1/1:1,8:9:24.05:245,24,0	0/0:14,0:14:39.12:0,39,491	0/0:10,0:10:27.09:0,27,340	1/1:1,10:11:30.05:299,30,0	1/1:0,20:20:60.10:602,60,0	1/1:0,7:7:21.05:214,21,0	0/0:12,0:12:36.09:0,36,426	0/0:11,0:11:30.10:0,30,377	0/0:8,0:8:24.08:0,24,302	1/1:1,14:15:39.09:398,39,0	0/0:22,0:22:66.21:0,66,820	1/1:0,19:19:57.13:582,57,0	0/0:10,0:10:27.09:0,27,340
chr10	78924200	.	CT	C	326.37	PASS	AB=0.925;AC=11;AF=0.196;AN=56;BaseQRankSum=2.401;DP=437;FS=0.694;HRun=14;HaplotypeScore=70.5569;InbreedingCoeff=0.5840;MQ=78.53;MQ0=3;MQRankSum=-1.201;QD=3.05;ReadPosRankSum=2.444;VQSLOD=-0.2809;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:20:28.02:0,28,249	0/0:8,0:8:20.97:0,21,179	0/0:30,0:18:16.41:0,16,118	0/1:30,1:17:13.41:13,0,102	0/0:19,1:20:11.13:0,11,210	1/1:11,6:17:22.69:149,23,0	1/1:4,7:11:20.78:144,21,0	0/0:27,0:27:33.95:0,34,298	0/0:11,0:11:3.24:0,3,141	0/0:17,1:18:9.18:0,9,209	0/1:14,1:16:12.33:12,0,143	0/0:12,0:16:23.20:0,23,137	0/0:11,0:15:24.79:0,25,145	0/0:12,0:15:27.24:0,27,181	0/0:20,0:19:30.91:0,31,265	0/0:13,0:13:21:0,21,188	0/0:10,0:10:17.95:0,18,150	0/0:5,0:5:3:0,3,28	0/0:20,0:20:18:0,18,160	0/0:14,1:15:21.46:0,21,186	0/1:10,1:11:5.58:6,0,92	0/0:13,0:13:23.92:0,24,204	0/0:10,0:10:15.28:0,15,116	0/0:16,0:16:24.01:0,24,218	0/0:6,0:6:12:0,12,105	1/1:7,6:13:11.67:78,12,0	0/0:22,0:22:30.39:0,30,254	1/1:3,4:8:13.71:87,14,0
chr10	78924234	.	AAT	A	892.94	PASS	AB=0.953;AC=26;AF=0.481;AN=54;BaseQRankSum=3.042;DP=306;FS=21.888;HRun=0;HaplotypeScore=60.3497;InbreedingCoeff=0.1514;MQ=70.78;MQ0=18;MQRankSum=1.678;QD=5.62;ReadPosRankSum=0.647;VQSLOD=1.2020;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,3:7:3.94:121,4,0	0/0:8,0:8:20.10:0,20,287	0/1:38,1:12:12.99:13,0,98	0/0:56,0:15:7.01:0,7,211	0/1:10,1:11:17.60:18,0,196	1/1:1,1:2:2.94:46,3,0	1/1:4,0:4:9.03:137,9,0	0/0:20,0:20:57.11:0,57,863	1/1:2,2:2:6.02:73,6,0	0/1:8,1:8:2.25:2,0,224	0/0:9,0:8:21.05:0,21,293	1/1:3,1:4:9.03:139,9,0	1/1:4,4:7:12.43:145,12,0	1/1:2,2:4:8.77:128,9,0	0/1:10,1:10:5.91:6,0,89	0/0:13,0:13:29.63:0,30,373	0/1:11,0:11:29.66:30,0,167	0/0:5,0:5:12.32:0,12,107	0/1:12,1:13:72.44:72,0,335	0/1:11,0:11:25.30:25,0,171	0/0:6,0:6:9.03:0,9,146	0/1:7,1:8:25.50:25,0,240	0/1:4,0:4:7.26:7,0,43	0/0:8,2:10:5.69:0,6,84	0/1:6,0:6:31.97:32,0,51	./.	0/0:17,0:17:15.10:0,15,325	1/1:3,0:2:3.01:46,3,0
chr10	78924235	.	ATGAGAGAGAG	A	1354.84	PASS	AB=0.963;AC=26;AF=0.481;AN=54;BaseQRankSum=7.680;DP=304;FS=23.826;HRun=0;HaplotypeScore=91.1211;InbreedingCoeff=-0.0961;MQ=70.99;MQ0=18;MQRankSum=-2.368;QD=6.39;ReadPosRankSum=2.331;VQSLOD=0.1536;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:8.91:61,9,0	0/1:7,1:8:72.25:72,0,90	0/0:38,0:12:7.17:0,7,95	0/1:58,0:15:2.83:3,0,82	0/1:11,0:11:74.68:75,0,76	1/1:2,0:2:2.98:21,3,0	0/1:4,0:4:6.38:50,0,6	0/0:20,0:20:56.32:0,56,460	1/1:4,0:2:5.91:37,6,0	0/1:9,0:8:70.54:71,0,102	0/1:9,0:8:89.75:90,0,91	1/1:4,0:4:8.95:65,9,0	0/1:8,0:7:2.69:55,0,3	1/1:4,0:4:8.89:60,9,0	0/1:10,0:9:2.68:160,0,3	0/1:13,0:13:75.98:76,0,141	0/1:10,0:11:23.47:23,0,753	0/0:5,0:5:13.06:0,13,166	0/1:10,3:13:99:147,0,154	0/1:11,0:11:75.68:138,0,76	0/0:6,0:6:8.78:0,9,74	0/0:9,0:9:19.48:0,19,298	0/0:4,0:4:3.69:0,4,26	0/0:9,0:10:5.70:0,6,165	0/1:5,0:6:13.75:150,0,14	./.	0/1:17,0:17:99:142,0,138	1/1:3,0:2:2.98:21,3,0
chr10	78924236	.	TGAGAGAGAGA	T	1337.28	PASS	AB=0.896;AC=19;AF=0.528;AN=36;BaseQRankSum=3.394;DP=316;FS=8.557;HRun=0;HaplotypeScore=95.0181;InbreedingCoeff=0.0451;MQ=69.98;MQ0=18;MQRankSum=-2.641;QD=9.55;ReadPosRankSum=3.640;VQSLOD=1.0961;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:9,0:9:9.01:124,9,0	./.	./.	0/1:7,4:11:25.57:104,0,26	./.	0/0:4,0:4:1.40:0,1,15	./.	1/1:6,0:4:0.47:1,0,0	0/1:8,0:7:9.43:67,0,9	1/1:9,1:9:6.02:145,6,0	0/0:6,0:6:3.01:0,3,41	0/1:8,0:7:15.62:16,0,32	./.	1/1:9,2:10:12.03:238,12,0	1/1:8,0:13:6.02:140,6,0	0/1:11,0:11:4.63:5,0,779	0/0:4,0:5:7.27:0,7,127	0/1:17,0:17:99:99,0,100	0/1:6,6:12:46.41:200,0,46	./.	0/0:9,0:10:17.61:0,18,219	./.	0/0:7,0:10:2.84:0,3,131	0/1:6,1:7:1.90:146,0,2	./.	1/1:13,4:17:6.02:177,6,0	./.
chr10	78924298	.	G	GGA	5528.89	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-8.443;DP=596;FS=0.430;HRun=0;HaplotypeScore=94.2454;InbreedingCoeff=0.9383;MQ=67.54;MQ0=20;MQRankSum=-0.946;QD=25.02;ReadPosRankSum=0.748;VQSLOD=5.1209;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:34:75.26:1250,75,0	0/0:6,0:6:12.02:0,12,153	0/1:66,0:22:1.21:1,0,280	0/0:88,0:29:19.94:0,20,451	0/0:26,0:26:69.22:0,69,886	1/1:3,24:27:63.22:1054,63,0	1/1:3,10:13:27.09:455,27,0	0/0:26,0:26:66.06:0,66,793	1/1:2,3:5:9.03:152,9,0	0/0:20,0:20:51.16:0,51,654	0/0:17,0:17:48.05:0,48,595	1/1:7,12:19:33.11:538,33,0	1/1:4,9:14:24.08:404,24,0	1/1:1,14:16:33.04:523,33,0	0/0:22,0:22:57.08:0,57,685	0/0:18,0:18:42.03:0,42,516	0/0:16,0:16:42.09:0,42,522	0/0:14,0:14:37.87:0,38,419	0/0:15,0:15:42.11:0,42,512	0/0:18,0:18:45.10:0,45,560	0/0:9,0:9:24.08:0,24,308	0/0:14,0:14:42.14:0,42,537	0/0:14,0:14:39.12:0,39,489	0/0:11,0:11:27.03:0,27,316	0/0:25,0:24:72.23:0,72,926	1/1:3,15:17:41.72:695,42,0	0/0:15,0:15:36.08:0,36,445	1/1:0,9:9:27.09:456,27,0
chr10	78925168	.	CACG	C	1708.22	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.341;DP=590;FS=0.000;HRun=0;HaplotypeScore=88.4241;InbreedingCoeff=0.9995;MQ=80.54;MQ0=0;MQRankSum=-1.348;QD=33.49;ReadPosRankSum=3.086;VQSLOD=3.8780;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.13:0,48,1028	0/0:18,0:18:54.14:0,54,1221	0/0:16,0:16:35.40:0,35,685	0/0:14,0:14:35.88:0,36,774	0/0:33,0:33:99:0,99,2177	0/0:29,0:29:84.11:0,84,1634	0/0:12,0:12:36.09:0,36,757	0/0:37,0:37:99:0,111,2499	0/0:19,0:19:57.20:0,57,1338	0/0:27,0:27:78.22:0,78,1721	0/0:33,0:33:96.15:0,96,1883	1/1:0,14:14:39:617,39,0	1/1:0,17:17:30.10:529,30,0	1/1:1,19:20:42.08:705,42,0	0/0:19,0:19:57.09:0,57,1239	0/0:14,0:14:42.14:0,42,991	0/0:17,0:17:51.16:0,51,1158	0/0:18,0:18:47.94:0,48,966	0/0:12,0:12:36.07:0,36,670	0/0:27,0:27:81.23:0,81,1856	0/0:14,0:14:42.14:0,42,963	0/0:19,0:19:57.05:0,57,1222	0/0:20,0:20:60.13:0,60,1200	0/0:15,0:15:45.13:0,45,990	0/0:28,0:28:84.22:0,84,1875	0/0:27,0:27:81.21:0,81,1768	0/0:38,0:38:99:0,111,2509	0/0:17,0:17:51.07:0,51,976
chr10	78927061	.	GAGACACACACACAC	G	773.43	PASS	AB=0.895;AC=6;AF=0.107;AN=56;BaseQRankSum=7.638;DP=549;FS=9.128;HRun=0;HaplotypeScore=180.0552;InbreedingCoeff=0.1575;MQ=53.08;MQ0=38;MQRankSum=-4.787;QD=8.23;ReadPosRankSum=-1.425;VQSLOD=1.9099;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:6,16:19:18.01:64,0,18	0/0:2,0:2:6.02:0,6,260	0/0:28,0:7:11.98:0,12,295	0/0:50,0:18:21.64:0,22,585	0/0:9,0:9:26.42:0,26,1038	1/1:18,0:15:5.24:153,5,0	0/0:6,0:5:8.94:0,9,68	0/0:30,0:28:84.23:0,84,3034	0/1:20,0:18:99:257,0,118	0/0:14,0:13:38.96:0,39,1805	0/0:14,0:14:33.10:0,33,1659	0/0:25,0:25:27.02:0,27,761	0/0:26,0:22:43.09:0,43,1193	0/0:20,0:16:31.62:0,32,1530	0/0:23,0:22:53.37:0,53,2529	0/0:20,0:19:51.16:0,51,2453	0/0:28,0:25:67.67:0,68,2933	0/0:22,0:22:54.02:0,54,1987	0/0:17,0:15:42.03:0,42,1191	0/0:21,0:19:47.89:0,48,1863	0/0:24,0:20:42.56:0,43,2055	0/0:7,0:6:15.03:0,15,697	0/0:12,0:12:14.14:0,14,491	0/0:25,0:23:60.12:0,60,2935	0/0:10,0:9:21.06:0,21,968	0/1:24,0:22:99:365,0,486	0/0:20,0:18:43.75:0,44,2227	0/1:10,0:9:40.96:55,0,41
chr10	78927063	.	G	GAC	303.75	PASS	AB=1.000;AC=10;AF=0.192;AN=52;BaseQRankSum=3.323;DP=543;FS=2.820;HRun=0;HaplotypeScore=97.1728;InbreedingCoeff=0.5339;MQ=53.06;MQ0=40;MQRankSum=1.037;QD=2.25;ReadPosRankSum=2.245;VQSLOD=1.9486;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:20:0:0,0,0	0/0:2,0:2:2.99:0,3,24	./.	0/0:49,0:17:2.94:0,3,18	0/0:10,0:9:8.97:0,9,71	0/0:6,0:15:2.84:0,3,14	./.	0/0:30,0:27:26.86:0,27,217	0/0:12,0:18:5.01:0,5,30	0/0:15,0:14:26.82:0,27,218	0/1:14,0:14:4.03:4,0,120	1/1:14,12:26:2.94:18,3,0	1/1:25,0:21:4.56:86,5,0	1/1:19,0:15:20.32:160,20,0	0/0:23,0:22:32.77:0,33,264	0/0:19,0:18:25.32:0,25,239	1/1:28,0:25:10.92:167,11,0	0/0:22,0:22:38.56:0,39,262	0/0:17,0:15:17.71:0,18,124	0/0:21,0:19:23.92:0,24,191	0/1:23,0:19:1.39:1,0,173	0/0:7,0:6:8.94:0,9,68	0/0:10,0:10:8.90:0,9,63	0/0:26,0:24:47.72:0,48,384	0/0:10,0:9:11.98:0,12,99	0/0:22,0:20:14.24:0,14,72	0/0:20,0:18:29.75:0,30,213	0/0:10,0:9:0.89:0,1,2
chr10	78927081	.	CACACACACACACAGAG	C	1358.84	PASS	AB=0.871;AC=7;AF=0.125;AN=56;BaseQRankSum=6.980;DP=486;FS=18.543;HRun=0;HaplotypeScore=175.9042;InbreedingCoeff=0.3120;MQ=46.40;MQ0=40;MQRankSum=-3.633;QD=15.99;ReadPosRankSum=-1.492;VQSLOD=1.2205;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:20:28.96:29,0,64	0/0:2,0:2:6.02:0,6,178	0/0:8,0:2:6.02:0,6,181	0/0:15,0:4:12.03:0,12,419	0/0:9,0:8:21.07:0,21,768	1/1:18,0:15:7.84:160,8,0	0/0:3,0:3:3.01:0,3,37	0/0:31,0:28:66.21:0,66,2269	0/1:11,0:9:34.12:304,0,34	0/0:19,0:18:51.13:0,51,2172	0/0:15,0:15:33.11:0,33,1253	0/0:25,0:25:24.53:0,25,912	0/0:20,0:16:28.63:0,29,1092	0/0:20,0:16:35.27:0,35,1367	0/0:29,0:27:41.40:0,41,1890	0/0:21,0:20:50.90:0,51,2122	0/0:33,0:30:55.50:0,56,2679	0/0:22,0:22:46.51:0,47,1601	0/0:13,0:11:26.84:0,27,1265	0/0:17,0:15:30.06:0,30,1237	0/0:25,0:20:40.08:0,40,1865	0/0:6,0:5:12.04:0,12,482	0/0:10,0:10:8.12:0,8,345	0/0:28,0:26:62.81:0,63,3087	0/0:10,0:9:18.05:0,18,704	0/1:7,12:17:99:854,0,129	0/0:20,0:17:34.85:0,35,1681	1/1:6,7:9:3.01:137,3,0
chr10	78927091	.	CACAGAG	C	524.60	PASS	AB=0.965;AC=15;AF=0.278;AN=54;BaseQRankSum=1.965;DP=458;FS=1.331;HRun=0;HaplotypeScore=113.4481;InbreedingCoeff=0.0441;MQ=45.83;MQ0=37;MQRankSum=-0.961;QD=2.19;ReadPosRankSum=0.475;VQSLOD=1.5879;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:19:40.68:41,0,41	0/0:1,0:1:2.04:0,2,6	./.	0/0:4,0:1:3:0,3,25	0/0:8,0:7:14.92:0,15,160	1/1:22,0:19:2.60:14,3,0	0/0:6,0:6:6.02:0,6,73	0/0:30,0:27:12.14:0,12,286	0/1:11,0:9:5.75:6,0,56	0/0:19,0:18:47.81:0,48,638	0/0:13,0:13:14.56:0,15,166	0/0:22,0:22:11.97:0,12,231	0/0:19,0:15:26.13:0,26,317	0/1:19,0:14:11.78:12,0,299	0/1:30,0:28:18.29:18,0,319	0/0:21,0:20:10.31:0,10,581	0/1:30,0:27:65.87:66,0,520	0/1:24,0:24:66.82:203,0,67	0/0:13,0:12:23.72:0,24,418	0/1:13,0:11:21.60:22,0,119	0/0:23,0:18:11.96:0,12,451	0/0:5,0:4:8.97:0,9,71	0/1:6,5:11:5.79:6,0,67	0/1:28,0:26:12.77:13,0,763	0/0:9,0:8:14.95:0,15,141	1/1:17,0:15:24.96:225,25,0	0/0:23,0:20:14.74:0,15,227	1/1:12,0:8:3.01:52,3,0
chr10	78927093	.	C	CAG	560.36	PASS	AB=0.981;AC=23;AF=0.500;AN=46;BaseQRankSum=-0.162;DP=473;FS=21.260;HRun=0;HaplotypeScore=106.9754;InbreedingCoeff=0.2825;MQ=45.31;MQ0=36;MQRankSum=-1.280;QD=2.23;ReadPosRankSum=-1.489;VQSLOD=0.6777;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:19:5.86:0,6,39	./.	./.	./.	0/1:9,0:8:14.66:18,0,15	0/0:22,0:19:2.96:0,3,19	1/1:7,0:7:8.32:52,8,0	1/1:35,0:32:9.80:64,10,0	1/1:11,0:9:9.77:62,10,0	0/1:20,0:19:38.63:57,0,39	1/1:13,0:13:3:25,3,0	0/1:21,1:22:15.22:41,0,15	0/1:19,0:15:17.19:17,0,25	0/1:18,0:14:34.52:35,0,47	0/0:24,8:30:5.66:0,6,34	1/1:21,0:20:17.99:154,18,0	0/0:29,0:27:34.31:0,34,235	0/0:23,0:23:5.48:0,5,33	1/1:15,0:14:5.97:47,6,0	./.	1/1:24,0:19:9.47:102,9,0	./.	0/0:11,0:11:2.97:0,3,20	0/0:28,0:27:26.37:0,26,200	1/1:11,0:10:3:25,3,0	0/0:16,0:15:11.29:0,11,65	1/1:20,0:22:2.96:19,3,0	0/0:12,0:8:2.88:0,3,15
chr10	78927252	.	G	GAA	4407.45	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.002;DP=528;FS=0.400;HRun=1;HaplotypeScore=79.4197;InbreedingCoeff=0.9427;MQ=83.34;MQ0=0;MQRankSum=-8.268;QD=31.48;ReadPosRankSum=0.762;VQSLOD=4.7312;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:33:57:923,57,0	0/0:5,0:5:15.04:0,15,220	0/0:17,0:17:36.47:0,36,610	0/0:18,0:18:43.69:0,44,542	0/0:23,0:23:69.21:0,69,1066	1/1:0,15:15:39.07:699,39,0	1/1:1,10:11:15.01:245,15,0	0/0:31,0:31:93.32:0,93,1511	1/1:0,13:14:33.11:620,33,0	0/0:22,0:22:63.20:0,63,978	0/0:22,0:22:66.21:0,66,1049	1/1:1,10:11:30.10:568,30,0	1/1:6,10:16:39:621,39,0	1/1:4,7:11:33.04:491,33,0	0/0:20,0:20:57.17:0,57,880	0/0:19,1:20:0.22:0,0,796	0/0:30,0:30:87.16:0,87,1326	0/0:21,0:21:63.11:0,63,941	0/0:22,0:21:60.12:0,60,835	0/0:26,0:26:69.22:0,69,1078	0/0:19,0:19:57.17:0,57,899	0/0:14,0:14:42.09:0,42,602	0/0:19,0:19:54.12:0,54,825	0/0:13,0:13:39.11:0,39,606	0/0:18,0:18:51.15:0,51,798	1/1:14,0:14:7.34:76,7,0	0/0:27,0:27:78.27:0,78,1247	1/1:15,0:15:38.89:164,39,0
chr10	78927254	.	A	ATC	5801.23	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=9.851;DP=523;FS=0.811;HRun=0;HaplotypeScore=75.8195;InbreedingCoeff=0.9588;MQ=82.17;MQ0=0;MQRankSum=-8.693;QD=43.29;ReadPosRankSum=0.594;VQSLOD=6.4185;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:57.09:952,57,0	0/0:4,0:4:12.04:0,12,184	0/0:17,0:17:37.19:0,37,554	0/0:17,0:16:40.65:0,41,528	0/0:22,0:22:66.22:0,66,1010	1/1:15,0:15:39.03:681,39,0	1/1:7,0:7:18.05:287,18,0	0/0:32,0:32:93.31:0,93,1397	1/1:14,0:14:33.11:613,33,0	0/0:22,0:22:63.17:0,63,922	0/0:21,0:21:63.21:0,63,963	1/1:11,0:11:30.10:552,30,0	1/1:17,0:17:44.88:659,45,0	1/1:10,0:10:24.08:428,24,0	0/0:21,0:21:54.18:0,54,825	0/0:20,0:20:1.22:0,1,750	0/0:31,0:31:87.26:0,87,1306	0/0:21,0:21:57.19:0,57,866	0/0:20,0:19:57.18:0,57,848	0/0:27,0:27:78.10:0,78,1096	0/0:21,0:21:57.15:0,57,827	0/0:14,0:14:42.14:0,42,642	0/0:20,0:20:57.15:0,57,810	0/0:14,0:14:42.10:0,42,595	0/0:19,0:19:54.16:0,54,782	1/1:2,12:14:42.10:760,42,0	0/0:26,0:26:78.25:0,78,1160	1/1:0,15:15:45.15:869,45,0
chr10	78927270	.	AT	A	727.59	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.838;DP=506;FS=0.000;HRun=6;HaplotypeScore=79.0235;InbreedingCoeff=0.9427;MQ=71.93;MQ0=2;MQRankSum=-5.029;QD=24.25;ReadPosRankSum=0.133;VQSLOD=3.0655;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:81.26:0,81,1062	0/0:5,0:5:9.02:0,9,106	0/0:18,0:14:19.51:0,20,205	0/0:15,0:10:6.64:0,7,35	0/0:21,0:21:60.20:0,60,787	0/0:17,0:17:45.15:0,45,591	0/0:14,0:14:42.12:0,42,537	0/0:31,0:30:69.17:0,69,861	0/0:10,0:10:27.08:0,27,343	0/0:22,0:22:63.20:0,63,807	0/0:17,0:17:42.13:0,42,538	1/1:1,7:8:21.05:225,21,0	1/1:1,13:14:39.10:419,39,0	1/1:0,8:8:21.05:225,21,0	0/0:19,0:19:54.18:0,54,710	0/0:22,0:22:51.16:0,51,657	0/0:34,1:35:67.20:0,67,1169	0/0:21,0:21:57.16:0,57,730	0/0:21,0:20:45.10:0,45,558	0/0:23,0:23:60.19:0,60,788	0/0:19,0:19:51.12:0,51,625	0/0:13,0:13:39.08:0,39,491	0/0:21,0:21:57.18:0,57,747	0/0:14,0:14:39.08:0,39,494	0/0:16,0:16:42.13:0,42,540	0/0:11,0:11:30.10:0,30,392	0/0:22,0:22:57.17:0,57,735	0/0:14,0:14:39.13:0,39,513
chr10	78928127	.	T	TAAAACTTTGCAAATAAAAAAAAAAAA	3440.56	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.668;DP=609;FS=1.741;HRun=0;HaplotypeScore=379.4378;InbreedingCoeff=0.9899;MQ=72.56;MQ0=0;MQRankSum=-3.581;QD=70.22;ReadPosRankSum=-2.502;VQSLOD=1.7405;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:36.09:0,36,1480	0/0:10,0:10:27.08:0,27,1400	0/0:20,0:20:18.02:0,18,754	0/0:14,0:14:24.01:0,24,626	0/0:31,0:31:63.12:0,63,3052	1/1:8,1:24:18.06:1184,18,0	1/1:9,0:9:21.04:847,21,0	0/0:34,0:34:78.08:0,78,2534	1/1:16,0:16:21.06:1409,21,0	0/0:25,0:25:63.18:0,63,3302	0/0:23,0:23:48.14:0,48,2564	0/0:19,0:19:45.09:0,45,1919	0/0:18,0:18:33.08:0,33,1616	0/0:26,0:26:60.15:0,60,2916	0/0:20,0:20:51.18:0,51,2644	0/0:17,0:17:48.08:0,48,1779	0/0:29,0:29:69.17:0,69,3169	0/0:22,0:22:48.15:0,48,2510	0/0:25,0:25:57.15:0,57,2510	0/0:30,0:30:75.23:0,75,3798	0/0:17,0:17:42.12:0,42,2279	0/0:23,0:23:51.14:0,51,2602	0/0:15,0:15:36.09:0,36,1547	0/0:16,0:16:45.11:0,45,1988	0/0:25,0:25:66.17:0,66,2726	0/0:25,0:25:51.11:0,51,2232	0/0:40,0:39:90.10:0,90,4167	0/0:15,0:15:32.96:0,33,1138
chr10	78928235	.	TTGTG	T	3215.28	PASS	AB=0.840;AC=32;AF=0.593;AN=54;BaseQRankSum=6.018;DP=560;FS=2.488;HRun=0;HaplotypeScore=135.6912;InbreedingCoeff=0.7968;MQ=61.89;MQ0=8;MQRankSum=-5.571;QD=9.74;ReadPosRankSum=-0.161;VQSLOD=3.1975;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:21:9.90:86,10,0	1/1:4,8:12:18.06:272,18,0	0/0:28,0:15:2.92:0,3,17	./.	1/1:5,11:17:24.04:352,24,0	0/0:10,0:10:21.04:0,21,236	0/0:12,0:12:19.64:0,20,157	1/1:23,5:28:13.96:137,14,0	0/0:18,0:18:14.22:0,14,118	1/1:9,5:14:7.85:233,8,0	1/1:6,6:13:9.03:142,9,0	1/1:23,0:23:21.91:197,22,0	1/1:24,0:24:18.02:167,18,0	1/1:27,0:27:32.96:296,33,0	1/1:3,8:13:21.06:293,21,0	1/1:1,10:11:18.06:285,18,0	0/0:18,0:34:42.14:0,42,750	0/0:21,0:24:44.32:0,44,793	0/1:9,0:17:6.27:73,0,6	1/1:12,0:28:27.03:251,27,0	1/1:22,0:24:7.30:59,7,0	0/0:19,0:19:24.08:0,24,533	0/0:14,0:14:14.65:0,15,259	0/0:24,0:26:59.94:0,60,1341	1/1:9,12:22:26.98:407,27,0	0/0:17,0:17:12.32:0,12,100	1/1:8,0:21:17.83:167,18,0	0/1:13,0:12:4.58:5,0,27
chr10	78928262	.	TGTGTGTGTGTGCGCGTGCGC	T	4518.26	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=5.845;DP=554;FS=1.361;HRun=0;HaplotypeScore=255.4975;InbreedingCoeff=0.5879;MQ=52.97;MQ0=8;MQRankSum=-7.110;QD=29.15;ReadPosRankSum=3.474;VQSLOD=3.6370;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:30:27.87:269,0,28	0/0:11,0:11:21.07:0,21,1201	0/0:12,0:5:12.04:0,12,239	0/0:10,0:1:3.01:0,3,77	0/0:23,0:22:45.15:0,45,2393	0/0:18,0:18:21.07:0,21,1320	0/0:13,0:13:30.88:0,31,1395	0/0:20,0:20:57.19:0,57,1863	0/0:14,0:14:17.55:0,18,990	0/0:24,0:24:72.21:0,72,3451	0/0:18,0:18:36.11:0,36,1792	1/1:0,19:19:24.08:1339,24,0	1/1:6,15:21:18.06:1006,18,0	1/1:6,22:28:36.12:1878,36,0	0/0:14,0:14:33.11:0,33,1720	0/0:13,0:13:27.09:0,27,1414	0/0:29,0:29:63.19:0,63,4405	0/0:26,0:25:72.05:0,72,4573	0/0:19,0:19:33.95:0,34,1137	0/0:25,0:25:48.16:0,48,2010	0/1:31,0:30:1.41:1,0,1181	0/0:14,0:14:33.11:0,33,2341	0/0:12,0:12:22.96:0,23,1290	0/0:28,0:28:75.26:0,75,5768	0/0:21,0:21:45.14:0,45,2193	0/1:24,0:24:24.88:25,0,1833	0/0:24,0:23:26.26:0,26,1442	0/0:11,0:10:9.03:0,9,461
chr10	78928266	.	TGTGTGTGCGCGTGCGC	T	3864.70	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=7.462;DP=540;FS=0.630;HRun=0;HaplotypeScore=219.4225;InbreedingCoeff=0.7791;MQ=54.70;MQ0=7;MQRankSum=-5.579;QD=34.20;ReadPosRankSum=3.657;VQSLOD=2.3740;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,24:29:15.05:613,15,0	0/0:10,0:10:21.07:0,21,879	0/0:10,0:5:14.69:0,15,147	0/0:8,0:1:3.01:0,3,77	0/0:23,0:22:48.11:0,48,1805	0/0:18,0:18:21.07:0,21,956	0/0:15,0:15:30.88:0,31,1020	0/0:22,0:22:59.32:0,59,1439	0/0:16,0:16:15.05:0,15,723	0/0:26,0:26:68.98:0,69,2605	0/0:19,0:19:39.12:0,39,1518	1/1:19,0:19:24.08:954,24,0	1/1:16,0:16:18.06:737,18,0	1/1:24,0:24:36.12:1348,36,0	0/0:14,0:14:33.11:0,33,1273	0/0:13,0:13:27.05:0,27,1037	0/0:28,0:28:60.21:0,60,3520	0/0:24,0:23:67.47:0,67,3597	0/0:17,0:17:13.85:0,14,824	0/0:25,0:25:51.18:0,51,1661	0/0:26,0:25:7.58:0,8,877	0/0:15,0:15:33.11:0,33,1826	0/0:13,0:13:28.83:0,29,1077	0/0:30,0:30:81.28:0,81,4816	0/0:22,0:22:48.16:0,48,1806	0/1:23,0:23:99:212,0,906	0/0:21,0:20:42.41:0,42,1098	0/0:12,0:11:9.03:0,9,308
chr10	78928272	.	TGCGC	T	2159.35	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=10.955;DP=526;FS=4.684;HRun=0;HaplotypeScore=128.0752;InbreedingCoeff=0.7263;MQ=55.68;MQ0=5;MQRankSum=-3.939;QD=10.33;ReadPosRankSum=5.459;VQSLOD=2.3829;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:15.03:154,15,0	0/1:10,0:10:37.72:38,0,41	0/0:6,0:3:5.60:0,6,28	0/0:5,0:2:4.83:0,5,43	0/1:22,0:21:2.23:2,0,263	1/1:16,0:17:9.85:110,10,0	1/1:15,0:15:13.18:290,13,0	0/0:19,0:19:22.15:0,22,546	1/1:15,0:15:13.77:99,14,0	0/0:23,0:23:38.63:0,39,787	0/0:19,0:19:19.46:0,19,404	1/1:19,0:19:24.03:230,24,0	1/1:16,0:16:18.02:168,18,0	1/1:24,0:24:33.03:317,33,0	0/0:16,0:16:10.09:0,10,248	0/1:13,0:13:13.22:13,0,118	0/0:27,0:27:60.20:0,60,1105	0/0:22,0:21:59.70:0,60,1210	0/0:22,0:21:28.12:0,28,420	0/0:27,0:27:45.83:0,46,518	0/0:27,0:26:33.50:0,34,469	0/0:14,0:14:30.10:0,30,579	0/0:11,0:11:26.70:0,27,391	0/0:34,0:34:93.24:0,93,1847	0/0:23,0:23:10.35:0,10,357	1/1:3,17:20:52.06:827,52,0	0/0:21,0:20:25.97:0,26,289	1/1:1,11:13:8.92:116,9,0
chr10	78928274	.	CGCGT	C	1679.16	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=9.283;DP=526;FS=7.309;HRun=0;HaplotypeScore=129.8135;InbreedingCoeff=0.8344;MQ=55.94;MQ0=5;MQRankSum=-2.492;QD=9.65;ReadPosRankSum=4.944;VQSLOD=2.1130;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:14.89:119,15,0	0/1:11,0:11:24.94:25,0,189	0/0:6,0:3:6.02:0,6,69	0/0:5,0:2:3.01:0,3,67	0/0:23,0:22:30.13:0,30,650	1/1:17,1:18:14.53:123,15,0	1/1:12,3:15:29.28:344,29,0	0/0:22,0:22:55.12:0,55,940	1/1:4,11:15:14.62:135,15,0	0/0:22,0:22:64.77:0,65,1306	0/0:19,0:19:38.97:0,39,714	1/1:19,0:19:23.92:211,24,0	1/1:16,0:16:18.02:168,18,0	1/1:24,0:24:32.99:299,33,0	0/0:17,0:17:37.95:0,38,587	0/0:13,0:13:26.59:0,27,317	0/0:26,0:26:60.21:0,60,1485	0/0:23,0:22:62.83:0,63,1307	0/0:21,0:20:46.05:0,46,789	0/0:27,0:27:56.44:0,56,883	0/0:27,0:26:36.06:0,36,729	0/0:14,0:14:32.94:0,33,598	0/0:10,0:10:23.65:0,24,434	0/0:33,0:33:90.26:0,90,2040	0/0:23,0:23:49.92:0,50,750	1/1:18,0:18:50.82:412,51,0	0/0:21,0:20:38.25:0,38,504	1/1:13,0:13:1.41:47,1,0
chr10	78928276	.	CGT	C	1079.86	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=9.206;DP=527;FS=7.836;HRun=0;HaplotypeScore=116.1593;InbreedingCoeff=0.9176;MQ=56.97;MQ0=5;MQRankSum=-3.450;QD=6.67;ReadPosRankSum=4.974;VQSLOD=2.0162;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:11.79:56,12,0	0/0:12,0:12:5.99:0,6,213	0/0:6,0:3:5.65:0,6,32	0/0:6,0:3:6.32:0,6,61	0/0:23,0:22:48.91:0,49,591	1/1:2,15:17:18.01:248,18,0	1/1:12,3:15:29.94:326,30,0	0/0:20,0:20:55.02:0,55,654	1/1:11,4:15:15:200,15,0	0/0:23,0:23:67.98:0,68,1004	0/0:20,0:20:42.12:0,42,576	1/1:19,0:19:19.12:96,19,0	1/1:16,0:16:17.04:84,17,0	1/1:24,0:24:28.88:141,29,0	0/0:17,0:17:42.79:0,43,505	0/0:14,0:14:29.93:0,30,328	0/0:25,0:25:60.20:0,60,1025	0/0:24,0:23:65.22:0,65,891	0/0:20,0:19:50.59:0,51,607	0/0:27,0:27:60.40:0,60,693	0/0:27,0:26:36.56:0,37,512	0/0:14,0:14:32.91:0,33,407	0/0:11,0:11:23.65:0,24,316	0/0:33,0:33:92.25:0,92,1424	0/0:22,0:22:56.75:0,57,693	1/1:18,0:18:21.22:105,21,0	0/0:21,0:20:46.03:0,46,457	1/1:13,0:13:4.71:30,5,0
chr10	78928724	.	ACAG	A	6802.05	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=8.142;DP=596;FS=11.723;HRun=0;HaplotypeScore=91.5868;InbreedingCoeff=0.9917;MQ=67.81;MQ0=2;MQRankSum=2.212;QD=26.16;ReadPosRankSum=0.450;VQSLOD=3.8827;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:42.14:0,42,818	1/1:4,4:8:12.04:173,12,0	0/0:28,0:26:42.14:0,42,782	0/0:29,1:26:52.60:0,53,922	1/1:6,16:22:35.87:420,36,0	0/0:23,0:23:48.11:0,48,903	0/0:24,0:24:57.20:0,57,1149	1/1:6,16:21:48.16:690,48,0	0/0:24,0:24:63.20:0,63,1245	1/1:7,32:39:93.27:1281,93,0	1/1:4,17:21:45.02:577,45,0	0/0:4,0:24:39.13:0,39,517	0/0:6,0:24:45.14:0,45,581	0/0:6,0:24:51.17:0,51,672	1/1:6,24:30:42.14:607,42,0	1/1:2,13:15:30.39:434,30,0	0/0:24,1:25:19.83:0,20,1113	0/0:16,0:16:45.15:0,45,864	1/1:9,11:19:33.09:447,33,0	1/1:7,23:30:69.06:916,69,0	1/1:0,14:14:33.11:477,33,0	0/0:15,0:15:36.12:0,36,662	0/0:15,0:15:21.03:0,21,302	0/0:26,0:26:55.53:0,56,1158	1/1:3,16:19:27.09:390,27,0	0/0:16,0:16:36.12:0,36,706	1/1:5,15:20:27.09:388,27,0	0/0:5,0:5:15.05:0,15,307
chr10	78929883	.	GA	G	577.76	PASS	AB=0.817;AC=7;AF=0.125;AN=56;BaseQRankSum=5.671;DP=592;FS=6.453;HRun=14;HaplotypeScore=71.7604;InbreedingCoeff=0.5078;MQ=75.18;MQ0=0;MQRankSum=0.148;QD=5.45;ReadPosRankSum=3.397;VQSLOD=2.4648;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,26:32:28.69:342,29,0	0/0:6,0:6:11.82:0,12,91	0/0:20,0:15:7.33:0,7,88	0/0:20,0:16:12.48:0,12,124	0/0:35,4:40:55.65:0,56,751	0/0:20,1:21:24.45:0,24,364	0/0:21,1:23:26.58:0,27,401	0/0:42,1:43:63.16:0,63,692	0/0:14,0:14:35.53:0,36,283	0/0:20,0:20:33.01:0,33,300	0/0:28,2:32:35.39:0,35,599	0/0:18,0:18:36.01:0,36,323	0/0:25,0:25:51.02:0,51,461	0/1:19,2:21:0.47:0,0,256	0/0:18,0:18:29.54:0,30,393	0/0:13,2:15:12.40:0,12,246	0/0:22,2:24:33.27:0,33,440	1/1:2,17:19:38.62:263,39,0	0/0:18,2:20:12.78:0,13,377	0/0:21,1:22:21.36:0,21,322	0/0:6,0:8:11:0,11,115	0/0:14,0:18:20.71:0,21,274	0/0:17,2:19:18.43:0,18,302	0/1:6,5:11:74.49:82,0,74	0/1:17,4:23:25.59:26,0,334	0/0:21,0:21:44.95:0,45,394	0/0:26,1:31:23.54:0,24,420	0/0:8,0:8:23.95:0,24,212
chr10	78930544	.	A	AT	6017.71	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-12.884;DP=537;FS=6.946;HRun=9;HaplotypeScore=50.0171;InbreedingCoeff=0.9840;MQ=68.46;MQ0=1;MQRankSum=0.509;QD=23.69;ReadPosRankSum=0.824;VQSLOD=5.6135;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:59.98:0,60,520	1/1:4,9:13:24.06:266,24,0	0/0:19,0:14:26.97:0,27,230	0/0:11,0:9:10.99:0,11,106	1/1:4,29:34:84.02:895,84,0	0/0:20,0:21:62.03:0,62,527	0/0:18,0:18:47.95:0,48,408	1/1:10,24:34:46.17:718,46,0	0/0:12,0:12:29.99:0,30,259	1/1:1,15:16:45.12:498,45,0	1/1:4,10:14:27.07:299,27,0	0/0:13,0:13:35.99:0,36,313	0/0:35,0:35:89.97:0,90,781	0/0:15,2:17:11.81:0,12,331	1/1:3,12:15:24.06:266,24,0	1/1:3,19:22:45.09:498,45,0	0/0:23,0:23:53.97:0,54,469	0/0:11,0:11:23.95:0,24,201	1/1:3,22:25:66.18:728,66,0	1/1:5,24:29:63.13:683,63,0	1/1:0,6:6:12.03:133,12,0	0/0:16,0:16:35.98:0,36,312	0/0:14,0:14:35.97:0,36,309	0/0:12,0:12:29.98:0,30,260	1/1:3,16:19:22.07:472,22,0	0/0:25,0:25:65.97:0,66,573	1/1:3,24:27:51.14:564,51,0	0/0:15,0:15:32.98:0,33,286
chr10	78931091	.	C	CACAA	10318.13	PASS	AB=0.792;AC=22;AF=0.393;AN=56;BaseQRankSum=-13.228;DP=727;FS=0.780;HRun=0;HaplotypeScore=120.2580;InbreedingCoeff=0.8655;MQ=69.54;MQ0=3;MQRankSum=2.572;QD=30.17;ReadPosRankSum=-1.599;VQSLOD=4.0698;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:77.32:0,77,1195	0/0:12,0:12:12.04:0,12,190	0/0:39,0:30:17.18:0,17,278	0/0:29,0:24:18.06:0,18,277	1/1:11,19:32:21.51:1353,22,0	0/0:7,0:28:39.04:0,39,363	0/0:4,0:22:33.02:0,33,299	1/1:32,5:38:30.99:488,31,0	0/0:5,0:24:54.06:0,54,502	1/1:11,16:27:54.17:1137,54,0	0/1:8,14:22:2.53:885,0,3	0/0:5,0:17:26.95:0,27,250	0/0:5,0:16:24.03:0,24,224	0/0:4,0:17:39.04:0,39,360	1/1:7,18:26:36.12:860,36,0	1/1:8,20:27:45.15:1075,45,0	0/0:34,0:34:69.23:0,69,1095	0/0:25,0:26:54.15:0,54,812	1/1:15,11:27:43.33:859,43,0	1/1:9,23:30:63.14:1401,63,0	1/1:6,11:17:27.04:588,27,0	0/0:23,0:23:51.17:0,51,808	0/0:25,0:25:45.15:0,45,710	0/0:29,0:29:51.16:0,51,787	1/1:11,8:22:24.08:573,24,0	0/1:34,1:34:23.52:24,0,666	1/1:13,20:35:45.15:1075,45,0	0/0:6,0:6:12.04:0,12,190
chr10	78934062	.	CTG	C	1524.03	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.179;DP=626;FS=7.131;HRun=0;HaplotypeScore=73.8203;InbreedingCoeff=0.9912;MQ=79.27;MQ0=0;MQRankSum=-1.727;QD=33.13;ReadPosRankSum=0.451;VQSLOD=5.5765;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1814	0/0:6,0:6:15.05:0,15,275	0/0:18,0:18:48.16:0,48,803	0/0:11,0:11:29.99:0,30,479	0/0:28,0:28:84.29:0,84,1531	0/0:18,0:18:54.19:0,54,990	0/0:31,0:31:93.32:0,93,1703	0/0:31,0:31:90.29:0,90,1595	0/0:19,0:19:48.15:0,48,849	0/0:14,0:14:42.14:0,42,770	0/0:27,0:27:81.26:0,81,1444	0/0:20,0:20:60.19:0,60,1070	0/0:22,0:22:63.20:0,63,1116	0/0:17,0:17:51.17:0,51,927	0/0:28,0:28:81.28:0,81,1484	0/0:30,0:30:90.29:0,90,1620	0/0:28,0:28:84.29:0,84,1540	0/0:12,0:12:36.10:0,36,627	0/0:25,0:25:69.23:0,69,1235	0/0:24,0:24:69.21:0,69,1205	0/0:28,0:28:81.26:0,81,1454	0/0:19,0:19:54.19:0,54,987	0/0:16,0:16:48.16:0,48,868	0/0:26,0:26:75.26:0,75,1366	0/0:17,0:17:51.17:0,51,926	1/1:4,28:32:29.24:1087,29,0	0/0:31,0:31:93.32:0,93,1702	1/1:0,14:14:39.13:559,39,0
chr10	78934516	.	C	CTG	1600.67	PASS	AB=0.899;AC=10;AF=0.185;AN=54;BaseQRankSum=-2.528;DP=718;FS=18.765;HRun=0;HaplotypeScore=110.9598;InbreedingCoeff=-0.2118;MQ=65.82;MQ0=4;MQRankSum=0.241;QD=5.88;ReadPosRankSum=0.321;VQSLOD=1.9168;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:34:39.82:0,40,416	0/0:12,0:13:17.62:0,18,161	0/0:26,0:18:3.01:0,3,34	./.	0/1:23,0:26:3.74:4,0,363	0/0:27,0:31:27.24:0,27,466	0/1:25,1:27:13.03:13,0,272	0/1:33,1:33:26.64:27,0,165	0/1:22,1:24:0.71:1,0,403	0/1:31,0:31:31.55:32,0,301	0/0:13,0:13:18.05:0,18,202	0/1:20,12:33:35.95:663,0,36	0/1:17,15:32:25.45:747,0,25	0/1:17,11:30:37.44:223,0,37	0/0:24,0:26:38.78:0,39,398	0/0:23,1:25:24.70:0,25,564	0/0:23,0:23:27.07:0,27,303	0/1:25,0:25:11.68:12,0,221	0/0:17,0:17:10.67:0,11,86	0/0:21,0:21:13.82:0,14,287	0/0:29,0:27:38.06:0,38,404	0/0:30,0:30:43.21:0,43,445	0/0:21,0:21:32.92:0,33,347	0/0:17,0:20:41.78:0,42,430	0/0:25,0:28:22.84:0,23,328	0/0:13,0:31:27.59:0,28,128	0/0:31,0:33:65.55:0,66,656	0/1:6,0:10:12.99:13,0,18
chr10	78934778	.	TTGTGTATGTGTGTGTGTGTGTG	T	1044.59	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=0.507;DP=611;FS=18.731;HRun=0;HaplotypeScore=303.0716;InbreedingCoeff=0.8721;MQ=66.98;MQ0=15;MQRankSum=0.382;QD=20.09;ReadPosRankSum=-1.436;VQSLOD=0.9983;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:56.97:0,57,2131	0/0:2,0:2:6.02:0,6,343	0/0:34,0:14:1.86:0,2,85	0/0:29,0:14:19.84:0,20,351	0/0:18,0:18:35.83:0,36,502	1/1:11,0:11:20.99:212,21,0	1/1:22,0:21:50.72:429,51,0	0/0:27,0:27:66.05:0,66,844	1/1:3,16:18:8.85:540,9,0	0/0:23,0:23:63.08:0,63,1599	0/0:17,0:17:38.99:0,39,1133	0/0:24,0:24:68.76:0,69,1881	0/0:21,0:21:45.40:0,45,1656	0/0:21,0:20:51.04:0,51,1698	0/0:25,0:25:54.01:0,54,1334	0/0:21,0:21:54.56:0,55,1481	0/0:35,0:35:77.58:0,78,2258	0/0:20,0:20:24.95:0,25,1246	0/0:16,0:15:45.01:0,45,822	0/0:14,0:14:32.85:0,33,826	0/0:45,0:43:99:0,108,2346	0/0:15,0:15:36.03:0,36,927	0/0:15,0:15:30.03:0,30,1629	0/0:27,0:27:56.78:0,57,3420	0/0:18,0:18:35.77:0,36,440	0/0:24,0:23:69.06:0,69,2994	0/0:27,0:30:71.92:0,72,1550	0/0:15,0:15:36:0,36,1137
chr10	78934784	.	ATGTG	A	844.87	PASS	AB=0.937;AC=21;AF=0.525;AN=40;BaseQRankSum=4.002;DP=634;FS=0.000;HRun=0;HaplotypeScore=112.8504;InbreedingCoeff=0.1731;MQ=60.14;MQ0=20;MQRankSum=-0.976;QD=2.69;ReadPosRankSum=3.636;VQSLOD=1.6810;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:11.40:11,0,94	0/1:3,0:3:0:0,0,0	./.	./.	./.	./.	./.	0/0:27,0:26:2.13:0,2,5	1/1:18,0:16:8.75:83,9,0	0/1:26,0:25:6.97:7,0,51	1/1:18,0:17:3.01:42,3,0	1/1:26,0:27:8.24:156,8,0	0/1:16,5:21:21.33:122,0,21	0/1:19,4:22:13.16:40,0,13	1/1:19,0:26:4.76:109,5,0	1/1:16,0:21:14.81:139,15,0	0/1:35,0:36:31.28:31,0,136	1/1:16,1:18:12.51:167,13,0	./.	./.	0/0:47,0:45:3.37:0,3,24	0/0:13,0:13:3:0,3,26	0/0:14,0:13:12:0,12,175	0/0:34,0:34:46.57:0,47,691	./.	0/0:36,0:35:34.75:0,35,327	1/1:29,0:30:4.62:52,5,0	0/1:12,0:12:21.87:22,0,64
chr10	78935944	.	TA	T	2544.87	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.639;DP=723;FS=2.116;HRun=2;HaplotypeScore=74.8919;InbreedingCoeff=0.9964;MQ=86.52;MQ0=0;MQRankSum=-1.767;QD=32.63;ReadPosRankSum=1.844;VQSLOD=3.8022;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.25:0,93,1341	0/0:8,0:8:24.08:0,24,359	0/0:30,0:30:87.25:0,87,1270	0/0:26,1:27:54.03:0,54,1050	0/0:41,0:41:99:0,120,1770	1/1:0,27:27:69.22:896,69,0	1/1:0,26:26:72.23:935,72,0	0/0:30,0:30:87.29:0,87,1289	1/1:0,25:25:66.21:857,66,0	0/0:32,0:32:96.30:0,96,1378	0/0:19,0:19:57.19:0,57,854	0/0:35,0:35:81.22:0,81,1163	0/0:24,0:24:66.22:0,66,985	0/0:25,0:25:63.17:0,63,909	0/0:26,0:26:75.24:0,75,1094	0/0:27,1:28:45.32:0,45,1158	0/0:22,0:22:66.22:0,66,989	0/0:6,0:6:18.06:0,18,270	0/0:20,0:20:57.19:0,57,843	0/0:34,0:34:99:0,102,1486	0/0:35,0:35:99:0,105,1550	0/0:22,0:22:66.22:0,66,984	0/0:19,0:19:57.19:0,57,854	0/0:24,0:24:72.22:0,72,1039	0/0:29,0:29:87.29:0,87,1304	0/0:29,0:29:87.29:0,87,1304	0/0:28,0:28:84.28:0,84,1254	0/0:19,0:19:51.17:0,51,764
chr10	78936020	.	C	CCGAT	8504.36	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.597;DP=728;FS=6.070;HRun=0;HaplotypeScore=113.9250;InbreedingCoeff=0.9837;MQ=87.05;MQ0=0;MQRankSum=-4.993;QD=62.08;ReadPosRankSum=1.416;VQSLOD=6.9884;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,41:48:99:2765,105,0	0/0:13,0:13:39.12:0,39,696	0/0:29,0:29:69.21:0,69,1175	0/0:22,0:22:60.12:0,60,986	0/0:41,0:41:99:0,114,1999	0/0:19,0:19:48.16:0,48,888	0/0:20,0:20:57.20:0,57,1064	0/0:34,0:34:96.32:0,96,1760	0/0:20,0:20:57.18:0,57,1025	0/0:25,0:25:72.25:0,72,1344	0/0:23,0:23:66.23:0,66,1232	1/1:3,26:29:63.22:1647,63,0	1/1:6,28:35:87.30:2269,87,0	1/1:2,23:25:69.24:1823,69,0	0/0:24,0:24:66.20:0,66,1161	0/0:28,0:28:81.25:0,81,1441	0/0:27,0:27:75.20:0,75,1293	0/0:4,0:4:9.03:0,9,168	0/0:21,0:21:57.18:0,57,1005	0/0:42,0:42:99:0,114,2003	0/0:32,0:32:90.28:0,90,1616	0/0:26,0:26:72.24:0,72,1313	0/0:15,0:15:42.13:0,42,753	0/0:31,0:31:78.23:0,78,1390	0/0:24,0:24:72.23:0,72,1313	0/0:28,0:28:84.26:0,84,1482	0/0:34,0:34:90.31:0,90,1679	0/0:9,0:9:27.09:0,27,504
chr10	78937295	.	GA	G	11680.02	PASS	AB=0.889;AC=40;AF=0.714;AN=56;BaseQRankSum=11.111;DP=783;FS=0.746;HRun=11;HaplotypeScore=94.3077;InbreedingCoeff=0.8385;MQ=68.77;MQ0=0;MQRankSum=0.790;QD=18.48;ReadPosRankSum=-0.528;VQSLOD=5.0803;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,28:36:41.94:540,42,0	1/1:0,11:11:32.96:271,33,0	0/1:17,2:20:5.38:5,0,174	0/1:9,1:9:15.64:16,0,43	1/1:9,24:34:70.93:572,71,0	1/1:2,25:27:65.91:542,66,0	1/1:7,19:26:56.83:451,57,0	1/1:5,24:29:71.89:591,72,0	1/1:2,31:33:86.90:714,87,0	1/1:7,31:39:88.86:717,89,0	1/1:1,17:19:49.94:397,50,0	1/1:5,31:37:82.94:671,83,0	1/1:6,32:38:95.88:788,96,0	1/1:3,30:34:88.93:720,89,0	1/1:3,33:36:89.89:739,90,0	1/1:2,35:37:99:862,105,0	0/0:23,1:24:38.47:0,38,596	0/0:13,0:13:33.08:0,33,352	1/1:1,29:30:86.88:710,87,0	1/1:6,35:41:63.86:731,64,0	1/1:9,26:35:71.86:591,72,0	0/0:22,0:23:38.26:0,38,441	0/0:24,1:27:33.82:0,34,635	0/0:29,0:29:66.16:0,66,698	1/1:6,15:21:15.95:337,16,0	0/0:25,2:27:10.86:0,11,527	1/1:7,31:39:62.93:713,63,0	0/0:8,0:8:21.05:0,21,224
chr10	78937567	.	G	GA	662.41	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.170;DP=720;FS=56.566;HRun=1;HaplotypeScore=65.9870;InbreedingCoeff=0.9371;MQ=92.67;MQ0=0;MQRankSum=-4.071;QD=34.86;ReadPosRankSum=0.378;VQSLOD=-0.7036;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.23:0,78,993	0/0:8,0:8:24.08:0,24,311	0/0:32,0:32:81.20:0,81,963	0/0:29,0:29:87.09:0,87,1048	0/0:42,0:42:99:0,126,1607	0/0:22,0:22:63.19:0,63,794	0/0:22,0:22:63.17:0,63,775	0/0:29,0:29:81.24:0,81,1017	0/0:20,0:20:60.13:0,60,757	0/0:22,0:22:63.20:0,63,805	0/0:29,0:29:84.27:0,84,1089	0/0:27,0:27:78.25:0,78,1012	0/0:36,0:36:99:0,108,1315	0/0:26,0:26:75.23:0,75,948	0/0:39,0:39:99:0,114,1467	0/0:25,0:25:72.21:0,72,897	0/0:22,0:22:63.20:0,63,817	0/0:15,0:15:39.13:0,39,505	0/0:23,0:23:66.19:0,66,829	0/0:38,0:38:99:0,111,1426	0/0:19,0:19:57.19:0,57,739	0/0:32,0:32:96.30:0,96,1231	0/0:25,0:25:72.23:0,72,934	0/0:18,0:18:54.18:0,54,699	0/0:29,0:29:81.26:0,81,1051	1/1:1,15:16:9.21:633,9,0	0/0:44,0:43:99:0,129,1656	1/1:0,3:3:9.03:135,9,0
chr10	78940043	.	ACC	A	6035.78	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=16.181;DP=769;FS=2.049;HRun=2;HaplotypeScore=108.2078;InbreedingCoeff=0.9997;MQ=81.89;MQ0=1;MQRankSum=-3.805;QD=45.04;ReadPosRankSum=3.617;VQSLOD=5.0029;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:65:99:0,196,3867	0/0:12,0:12:36.12:0,36,731	0/0:29,0:29:78.15:0,78,1358	0/0:25,0:25:75.26:0,75,1503	0/0:25,0:25:72.23:0,72,1405	0/0:18,0:18:54.15:0,54,1037	0/0:28,0:28:84.27:0,84,1638	0/0:30,0:30:87.29:0,87,1704	0/0:17,0:17:51.18:0,51,1036	0/0:24,0:24:72.25:0,72,1443	0/0:11,0:11:33.11:0,33,615	1/1:0,19:18:51.17:817,51,0	1/1:0,42:42:99:1907,117,0	1/1:0,30:30:84.29:1370,84,0	0/0:35,0:35:99:0,105,2094	0/0:32,0:32:96.33:0,96,1950	0/0:37,0:37:99:0,111,2181	0/0:18,0:18:54.18:0,54,1065	0/0:24,0:24:72.25:0,72,1402	0/0:29,0:29:87.30:0,87,1733	0/0:45,0:45:99:0,132,2611	0/0:26,0:26:78.27:0,78,1570	0/0:12,0:12:36.12:0,36,728	0/0:41,0:41:99:0,114,2287	0/0:27,0:27:81.28:0,81,1640	1/1:1,31:32:32.33:1404,32,0	0/0:25,0:25:72.25:0,72,1459	1/1:0,11:11:33.11:538,33,0
chr10	78941321	.	GC	G	744.66	PASS	AB=0.801;AC=30;AF=0.577;AN=52;BaseQRankSum=0.367;DP=155;FS=5.856;HRun=10;HaplotypeScore=26.8358;InbreedingCoeff=0.3290;MQ=82.28;MQ0=1;MQRankSum=0.879;QD=7.68;ReadPosRankSum=3.370;VQSLOD=0.2112;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:27.06:0,27,291	1/1:0,1:1:3:26,3,0	0/1:14,0:12:1.48:1,0,186	0/0:9,1:3:0.82:0,1,30	1/1:2,2:4:8.99:78,9,0	./.	0/0:8,0:8:20.98:0,21,207	1/1:3,2:5:5.99:52,6,0	0/0:5,0:5:11.96:0,12,108	1/1:0,1:1:3:26,3,0	1/1:0,2:2:3:26,3,0	1/1:5,3:8:8.97:78,9,0	0/1:8,1:9:16.45:40,0,16	1/1:0,6:6:15:130,15,0	1/1:3,3:6:8.99:78,9,0	0/1:2,2:4:10.78:43,0,11	0/1:10,1:11:21.82:22,0,197	0/0:5,0:7:11.87:0,12,114	1/1:1,2:2:2.99:26,3,0	1/1:4,0:4:2.97:22,3,0	0/1:1,3:4:21.18:66,0,21	0/0:6,0:7:18.05:0,18,199	0/0:4,0:4:8.97:0,9,86	0/1:2,1:3:17.03:17,0,57	1/1:0,5:5:12:104,12,0	0/0:3,0:4:8.86:0,9,81	1/1:2,5:7:9.87:80,10,0	./.
chr10	78941662	.	TTCTCTCTCTCTCTC	T	3168.66	PASS	AB=0.871;AC=23;AF=0.460;AN=50;BaseQRankSum=7.163;DP=588;FS=11.669;HRun=0;HaplotypeScore=197.5715;InbreedingCoeff=0.6873;MQ=63.36;MQ0=26;MQRankSum=-4.800;QD=12.00;ReadPosRankSum=-0.718;VQSLOD=1.7434;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:27.09:0,27,666	1/1:9,0:9:3.01:40,3,0	./.	0/0:22,0:8:0:0,0,1	1/1:15,1:16:6.48:143,6,0	1/1:18,0:22:12.04:391,12,0	./.	0/0:35,0:33:1.55:0,2,4	1/1:21,0:27:12.01:315,12,0	1/1:17,4:21:10.69:173,11,0	./.	0/0:20,0:20:18.06:0,18,639	0/0:29,0:29:31.04:0,31,1133	0/0:21,0:21:15.05:0,15,691	1/1:21,15:33:18.06:698,18,0	1/1:18,11:28:21.07:789,21,0	0/0:18,0:20:15.05:0,15,468	0/0:15,0:18:16.87:0,17,361	1/1:14,0:13:3.01:98,3,0	1/1:9,4:11:8.99:253,9,0	1/1:21,0:21:6:65,6,0	0/0:23,0:22:12.03:0,12,291	0/0:20,0:20:3:0,3,25	0/0:22,0:20:33.11:0,33,1517	0/1:23,0:27:39.57:40,0,161	0/0:17,0:19:27.05:0,27,424	1/1:17,6:22:7.83:346,8,0	0/0:10,0:6:6.02:0,6,103
chr10	78942253	.	A	AT	21447.87	PASS	AB=0.833;AC=55;AF=0.982;AN=56;BaseQRankSum=-1.163;DP=537;FS=0.000;HRun=1;HaplotypeScore=171.7703;InbreedingCoeff=-0.0255;MQ=64.98;MQ0=0;MQRankSum=-3.386;QD=39.94;ReadPosRankSum=1.422;VQSLOD=4.3790;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:12:30.06:424,30,0	1/1:0,11:11:33.11:494,33,0	1/1:3,8:11:2.01:326,2,0	0/1:4,1:5:22.71:71,0,23	1/1:7,34:40:90.22:1289,90,0	1/1:2,18:19:57.15:828,57,0	1/1:1,20:21:60.20:891,60,0	1/1:3,22:25:66.22:981,66,0	1/1:1,11:12:36.09:515,36,0	1/1:0,23:23:69.23:1034,69,0	1/1:2,32:34:99:1433,102,0	1/1:4,13:17:51.07:687,51,0	1/1:3,10:13:39.12:559,39,0	1/1:1,11:12:36.08:514,36,0	1/1:1,18:19:54.18:808,54,0	1/1:1,12:13:36.12:539,36,0	1/1:3,24:27:75.14:1050,75,0	1/1:3,17:20:51.17:764,51,0	1/1:5,18:23:66.21:956,66,0	1/1:2,28:30:87.28:1254,87,0	1/1:0,9:9:27.09:405,27,0	1/1:3,12:15:42.14:624,42,0	1/1:6,19:24:66.12:897,66,0	1/1:1,7:8:21.07:314,21,0	1/1:2,26:28:81.27:1189,81,0	1/1:2,18:20:57.15:829,57,0	1/1:1,27:28:84.24:1233,84,0	1/1:0,15:15:36.12:539,36,0
chr10	78943257	.	A	AGAAGAG	4106.42	PASS	AB=0.636;AC=13;AF=0.232;AN=56;BaseQRankSum=1.863;DP=636;FS=2.102;HRun=0;HaplotypeScore=132.7733;InbreedingCoeff=0.6872;MQ=62.06;MQ0=9;MQRankSum=-6.475;QD=25.19;ReadPosRankSum=4.266;VQSLOD=2.9571;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:39:79.93:0,80,1334	0/0:9,0:8:23.90:0,24,447	0/0:15,0:5:8.88:0,9,106	0/0:13,0:12:29.93:0,30,496	0/0:13,0:15:45.08:0,45,785	0/1:8,0:21:61.57:62,0,135	0/1:13,0:24:22.07:22,0,241	0/0:20,0:20:32.92:0,33,698	0/1:7,0:20:64.60:65,0,102	0/0:24,0:24:72.21:0,72,1301	0/0:21,0:21:63.04:0,63,1089	1/1:2,19:23:33.06:1159,33,0	1/1:2,21:27:27.01:927,27,0	1/1:0,23:23:42.14:1380,42,0	0/0:31,0:30:81.19:0,81,1530	0/0:23,0:23:66.15:0,66,1192	0/0:40,0:39:99:0,116,2056	0/0:22,0:22:66.17:0,66,1394	0/0:24,0:22:59.41:0,59,647	0/0:27,0:27:78.07:0,78,1255	0/0:22,0:21:59.99:0,60,961	0/0:25,0:25:75.16:0,75,1418	0/0:22,0:22:66.09:0,66,1110	0/0:28,0:30:81.15:0,81,1495	0/0:18,0:18:48.08:0,48,798	1/1:16,0:16:18.80:314,19,0	0/0:31,0:31:90.12:0,90,1496	1/1:8,0:8:20.89:178,21,0
chr10	78943258	.	G	GA	514.74	PASS	AB=0.653;AC=8;AF=0.143;AN=56;BaseQRankSum=11.193;DP=638;FS=0.570;HRun=2;HaplotypeScore=87.8242;InbreedingCoeff=0.6465;MQ=61.98;MQ0=9;MQRankSum=-7.508;QD=5.31;ReadPosRankSum=4.800;VQSLOD=0.7781;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:39:43.04:0,43,536	0/0:9,0:8:24.08:0,24,311	0/0:15,0:5:8.78:0,9,96	0/0:13,0:12:29.83:0,30,362	0/0:15,0:15:44.93:0,45,538	0/0:22,0:22:27.82:0,28,294	0/0:24,0:24:42.23:0,42,454	0/0:18,0:19:49.89:0,50,632	0/0:20,0:20:22.23:0,22,230	0/0:25,0:25:72.23:0,72,934	0/0:21,0:21:63.20:0,63,817	1/1:23,0:22:25.85:120,26,0	1/1:26,1:27:23.13:98,23,0	1/1:23,0:23:4.37:96,4,0	0/0:31,0:30:90.18:0,90,1102	0/0:22,0:22:66.21:0,66,855	0/0:40,0:39:99:0,120,1510	0/0:23,0:23:66.21:0,66,857	0/0:25,0:23:63.17:0,63,794	0/0:27,0:27:78.20:0,78,979	0/0:22,0:21:63.17:0,63,786	0/0:25,0:25:75.23:0,75,957	0/0:22,0:22:66.20:0,66,840	0/0:32,0:32:81.26:0,81,1050	0/0:18,0:18:48.16:0,48,622	0/1:7,9:16:20.38:283,0,20	0/0:30,0:30:90.28:0,90,1153	0/1:4,4:8:23.04:64,0,23
chr10	78943260	.	G	GAA	528.94	PASS	AB=0.827;AC=6;AF=0.107;AN=56;BaseQRankSum=11.012;DP=643;FS=8.023;HRun=1;HaplotypeScore=99.3235;InbreedingCoeff=0.3133;MQ=62.16;MQ0=9;MQRankSum=-6.592;QD=5.57;ReadPosRankSum=3.942;VQSLOD=-0.4064;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:39:87.17:0,87,678	0/0:9,0:8:24.08:0,24,388	0/0:17,0:7:11.96:0,12,185	0/0:13,0:12:27.09:0,27,425	0/0:15,0:15:44.93:0,45,659	0/0:22,0:22:42.54:0,43,404	0/0:23,0:23:42.75:0,43,510	0/0:20,0:20:35.41:0,35,743	0/0:20,0:20:40.13:0,40,357	0/0:26,0:26:75.25:0,75,1202	0/0:21,0:21:63.20:0,63,999	0/1:22,0:21:7.82:17,0,8	1/1:25,0:26:5.71:27,6,0	0/1:23,0:23:2.45:2,0,33	0/0:32,0:31:90.22:0,90,1340	0/0:24,0:24:72.16:0,72,1050	0/0:40,0:39:99:0,120,1889	0/0:24,0:24:69.21:0,69,1097	0/0:24,0:22:62.23:0,62,887	0/0:26,0:26:75.24:0,75,1196	0/0:23,0:22:63.17:0,63,953	0/0:25,0:25:75.23:0,75,1171	0/0:23,0:23:66.20:0,66,1013	0/0:31,0:31:87.26:0,87,1346	0/0:18,0:18:48.16:0,48,779	0/1:7,9:16:35.49:448,0,35	0/0:31,0:31:90.30:0,90,1432	0/1:4,4:8:6.37:150,0,6
chr10	78945198	.	TC	T	920.66	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.306;DP=678;FS=0.000;HRun=3;HaplotypeScore=69.9890;InbreedingCoeff=0.9894;MQ=89.06;MQ0=0;MQRankSum=-0.980;QD=29.70;ReadPosRankSum=0.020;VQSLOD=2.9205;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,141,2009	0/0:5,0:5:15.05:0,15,216	0/0:28,0:28:77.71:0,78,1010	0/0:23,0:23:35.78:0,36,602	0/0:23,0:23:69.22:0,69,975	0/0:28,0:28:84.27:0,84,1192	0/0:28,0:28:84.28:0,84,1209	0/0:39,0:39:99:0,114,1608	0/0:21,0:21:57.18:0,57,803	0/0:27,0:27:78.25:0,78,1094	0/0:17,0:17:45.14:0,45,630	0/0:31,0:31:93.31:0,93,1339	0/0:24,0:24:69.22:0,69,976	0/0:20,0:20:60.19:0,60,834	0/0:35,0:35:99:0,102,1397	0/0:23,0:23:63.17:0,63,884	0/0:23,0:23:57.19:0,57,818	0/0:11,0:11:33.11:0,33,475	0/0:14,0:14:39.13:0,39,561	0/0:27,0:27:78.26:0,78,1122	0/0:37,0:36:99:0,102,1464	0/0:24,0:24:69.23:0,69,994	0/0:12,0:12:33.11:0,33,474	0/0:34,0:34:99:0,99,1425	0/0:24,0:24:66.22:0,66,950	1/1:1,22:23:63.20:781,63,0	0/0:19,0:19:54.18:0,54,778	1/1:0,8:8:21.07:260,21,0
chr10	78945729	.	T	TG	2480.30	PASS	AB=1.000;AC=17;AF=0.315;AN=54;BaseQRankSum=-5.737;DP=417;FS=9.162;HRun=7;HaplotypeScore=63.6601;InbreedingCoeff=0.6904;MQ=65.60;MQ0=9;MQRankSum=0.204;QD=17.47;ReadPosRankSum=1.841;VQSLOD=2.8891;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:21:41.16:473,41,0	0/1:2,0:2:0.37:0,0,24	0/0:18,0:13:20.47:0,20,289	0/0:21,0:15:25.05:0,25,252	0/0:9,0:9:0.54:0,1,100	1/1:1,19:18:39.12:471,39,0	1/1:2,10:11:24.07:290,24,0	0/0:31,0:31:66.08:0,66,632	1/1:1,11:12:27.08:325,27,0	0/1:9,0:9:19.67:27,0,20	0/0:7,0:7:4.77:0,5,49	1/1:2,15:17:33.06:382,33,0	1/1:0,11:11:27.08:325,27,0	1/1:1,10:11:30.09:362,30,0	0/0:10,0:10:20.12:0,20,88	0/0:13,0:13:26.63:0,27,137	0/0:30,0:30:84.09:0,84,797	0/0:28,0:28:75.01:0,75,710	0/0:19,0:19:47.66:0,48,246	0/0:2,0:2:2.90:0,3,16	0/0:23,0:23:25.31:0,25,233	./.	0/0:5,0:5:12.02:0,12,116	0/0:12,0:12:33.05:0,33,318	0/0:16,0:16:22.47:0,22,181	0/1:9,0:26:15.06:15,0,42	0/0:21,0:21:54.59:0,55,280	0/0:1,0:8:12.32:0,12,38
chr10	78945792	.	C	CTTGGAACTGGAGTTCCGTACGGCG	17192.64	PASS	AB=0.870;AC=9;AF=0.167;AN=54;BaseQRankSum=2.279;DP=391;FS=21.098;HRun=0;HaplotypeScore=235.3349;InbreedingCoeff=0.7717;MQ=86.06;MQ0=2;MQRankSum=-11.837;QD=207.14;ReadPosRankSum=0.743;VQSLOD=3.4564;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.25:0,72,4147	0/0:1,0:1:3.01:0,3,81	0/0:11,0:11:15.46:0,15,1088	0/0:18,0:18:54.05:0,54,2463	0/0:7,0:7:21.07:0,21,1123	0/0:16,0:14:30.10:0,30,1778	0/0:15,0:15:42.14:0,42,2458	0/0:20,0:20:54.17:0,54,2418	0/0:15,0:15:38.69:0,39,2171	0/0:5,0:5:15.05:0,15,963	0/0:2,0:2:3.01:0,3,132	1/1:19,2:21:45.15:3793,45,0	1/1:7,5:12:29.11:2169,29,0	1/1:16,8:24:63.22:5624,63,0	0/0:12,0:12:36.12:0,36,2168	0/0:8,0:8:24.08:0,24,1367	0/0:30,0:30:84.26:0,84,5034	0/0:25,0:25:72.23:0,72,4066	0/0:14,0:14:36.11:0,36,2001	0/0:8,0:8:18.06:0,18,818	0/0:33,0:33:96.32:0,96,5599	./.	0/0:4,0:4:12.04:0,12,531	0/0:17,0:17:51.16:0,51,2744	0/0:11,0:11:33.07:0,33,1707	0/1:17,3:20:99:4303,0,138	0/0:10,0:10:30.06:0,30,1387	1/1:6,0:6:18:1304,18,0
chr10	78946512	.	A	AAAG	401.03	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=4.235;DP=531;FS=12.220;HRun=0;HaplotypeScore=118.3559;InbreedingCoeff=0.3753;MQ=58.73;MQ0=9;MQRankSum=-4.233;QD=3.08;ReadPosRankSum=2.370;VQSLOD=1.7938;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:56.46:0,56,447	0/0:11,0:11:6.57:0,7,72	0/0:27,0:9:15.74:0,16,140	0/0:11,0:8:5.92:0,6,89	0/0:28,0:27:19.05:0,19,276	0/1:21,0:20:3.07:3,0,138	0/0:19,0:18:16.19:0,16,201	0/0:30,0:30:35.62:0,36,347	0/0:13,0:13:14.88:0,15,136	0/0:24,0:24:35.32:0,35,308	0/0:13,0:13:0.80:0,1,36	1/1:7,1:16:11.14:152,11,0	1/1:13,0:13:23.87:190,24,0	1/1:4,10:15:8.29:115,8,0	0/1:17,0:16:25.98:26,0,103	0/0:14,0:13:24.97:0,25,176	0/0:20,0:19:8.32:0,8,217	0/0:17,0:15:27.54:0,28,288	0/0:22,0:20:22.16:0,22,217	0/1:28,0:28:24.23:24,0,146	0/0:10,0:8:2.85:0,3,6	0/0:12,0:12:24.06:0,24,193	0/0:21,0:20:20.77:0,21,253	0/0:20,0:20:3.06:0,3,233	0/1:18,0:18:38.44:38,0,125	0/0:25,0:24:34.30:0,34,255	0/0:20,0:19:6.33:0,6,79	0/0:14,0:13:29.96:0,30,176
chr10	78946608	.	TTCTCTCTCTCTCTC	T	386.37	PASS	AB=0.762;AC=11;AF=0.239;AN=46;BaseQRankSum=4.120;DP=525;FS=0.000;HRun=0;HaplotypeScore=194.2348;InbreedingCoeff=0.3705;MQ=66.62;MQ0=8;MQRankSum=-3.090;QD=3.68;ReadPosRankSum=-0.515;VQSLOD=2.1874;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:2.60:10,3,0	0/0:7,0:7:6.02:0,6,89	0/0:29,0:13:0:0,0,0	./.	0/0:17,0:17:3.48:0,3,42	1/1:20,0:20:3:97,3,0	1/1:24,0:24:0.09:44,0,0	0/0:29,0:29:0:0,0,0	1/1:13,0:13:2.39:94,2,0	0/0:21,0:20:18.06:0,18,386	0/0:21,0:20:3.01:0,3,50	0/0:16,0:16:0:0,0,1	0/0:15,0:15:5.94:0,6,43	0/0:16,0:16:9.03:0,9,122	0/0:19,0:18:6.02:0,6,102	0/0:17,0:16:12.04:0,12,315	0/0:22,0:21:21.04:0,21,822	0/1:11,4:16:72.45:160,0,72	0/0:13,0:13:6.49:0,6,158	./.	0/0:22,0:22:9.03:0,9,176	0/0:24,0:24:3.01:0,3,91	./.	0/0:25,0:27:18.06:0,18,707	./.	./.	0/0:14,0:12:6.02:0,6,115	1/1:7,0:8:3.01:98,3,0
chr10	78947321	.	A	AT	773.61	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.940;DP=562;FS=0.000;HRun=5;HaplotypeScore=50.1421;InbreedingCoeff=0.9850;MQ=80.55;MQ0=0;MQRankSum=-4.398;QD=32.23;ReadPosRankSum=0.855;VQSLOD=3.9877;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:66.21:868,66,0	0/0:10,0:10:27.07:0,27,290	0/0:18,0:18:48.12:0,48,514	0/0:10,0:10:21.52:0,22,226	0/0:21,0:21:60.12:0,60,628	0/0:19,0:19:51.13:0,51,548	0/0:13,0:13:36.09:0,36,387	0/0:34,0:34:84.21:0,84,901	0/0:20,0:20:57.12:0,57,604	0/0:21,0:21:60.15:0,60,645	0/0:32,0:32:84.21:0,84,903	0/0:24,0:24:66.15:0,66,701	0/0:31,0:31:84.19:0,84,894	0/0:16,0:16:48.11:0,48,508	0/0:25,0:25:72.18:0,72,774	0/0:22,0:22:63.16:0,63,677	0/0:20,0:20:54.13:0,54,580	0/0:15,0:15:39.07:0,39,408	0/0:15,0:15:45.08:0,45,467	0/0:28,0:28:63.15:0,63,677	0/0:7,0:7:21.05:0,21,226	0/0:19,0:19:51.11:0,51,539	0/0:20,0:20:57.14:0,57,612	0/0:5,0:7:19.11:0,19,173	0/0:31,0:31:87.21:0,87,928	0/0:20,0:20:54.12:0,54,567	0/0:22,0:22:66.15:0,66,700	0/0:18,0:18:47.73:0,48,514
chr10	78951423	.	GA	G	1365.66	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.704;DP=607;FS=2.956;HRun=3;HaplotypeScore=59.8334;InbreedingCoeff=0.9916;MQ=78.09;MQ0=0;MQRankSum=-0.864;QD=34.14;ReadPosRankSum=0.080;VQSLOD=4.0966;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.23:0,81,1142	0/0:5,0:5:15.05:0,15,216	0/0:19,0:20:48.15:0,48,647	0/0:16,0:16:42.11:0,42,567	0/0:34,0:34:93.31:0,93,1336	0/0:26,0:26:78.26:0,78,1123	0/0:21,0:21:60.19:0,60,847	0/0:39,0:39:99:0,108,1522	0/0:21,0:21:60.20:0,60,862	0/0:32,0:32:87.28:0,87,1217	0/0:14,0:14:36.12:0,36,517	0/0:22,0:22:66.22:0,66,950	0/0:37,0:37:99:0,105,1494	0/0:11,0:11:33.09:0,33,440	0/0:27,0:27:78.25:0,78,1105	0/0:21,0:21:60.18:0,60,829	0/0:17,0:17:51.17:0,51,734	0/0:19,0:19:51.13:0,51,695	0/0:19,0:19:51.15:0,51,699	0/0:13,0:13:39.13:0,39,560	0/0:24,0:24:69.23:0,69,992	0/0:22,0:22:66.21:0,66,930	0/0:18,0:18:45.15:0,45,647	0/0:15,0:15:45.15:0,45,647	0/0:20,0:20:60.19:0,60,848	1/1:0,26:26:78.25:967,78,0	0/0:27,0:26:81.23:0,81,1109	1/1:0,14:14:42.13:521,42,0
chr10	78951739	.	C	CT	8440.01	PASS	AB=0.800;AC=53;AF=0.946;AN=56;BaseQRankSum=0.617;DP=273;FS=56.876;HRun=2;HaplotypeScore=177.1017;InbreedingCoeff=0.4633;MQ=53.31;MQ0=1;MQRankSum=-5.019;QD=31.38;ReadPosRankSum=2.999;VQSLOD=-0.1328;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,17:21:47.32:687,47,0	1/1:0,7:7:15.05:215,15,0	0/0:4,0:4:8.87:0,9,66	0/1:6,2:8:64.97:65,0,108	1/1:0,8:8:12.04:172,12,0	1/1:1,11:12:27.98:390,28,0	1/1:1,9:10:24.04:322,24,0	1/1:3,9:12:30.10:431,30,0	1/1:2,10:13:27.05:365,27,0	1/1:2,6:8:21.07:294,21,0	1/1:1,4:5:15.04:199,15,0	1/1:4,11:15:32.72:473,33,0	1/1:2,10:12:30.06:408,30,0	1/1:0,9:9:24.08:344,24,0	1/1:2,9:11:33.11:474,33,0	1/1:0,11:11:24.08:332,24,0	1/1:3,7:10:16.96:295,17,0	1/1:2,7:9:24.08:345,24,0	1/1:2,6:8:18.06:259,18,0	1/1:2,11:12:33.11:473,33,0	1/1:4,7:11:18.02:235,18,0	1/1:0,7:7:15.05:215,15,0	1/1:1,6:7:15.05:202,15,0	1/1:3,4:7:12.01:150,12,0	1/1:4,11:15:33.06:451,33,0	1/1:1,8:9:24.08:344,24,0	1/1:2,6:8:18.06:258,18,0	1/1:1,1:2:3.01:43,3,0
chr10	78951745	.	C	CA	7566.65	PASS	AB=0.900;AC=54;AF=0.964;AN=56;BaseQRankSum=-2.387;DP=258;FS=32.205;HRun=1;HaplotypeScore=181.0284;InbreedingCoeff=-0.0683;MQ=53.71;MQ0=1;MQRankSum=-2.313;QD=29.33;ReadPosRankSum=3.709;VQSLOD=1.9623;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:20:37.26:496,37,0	1/1:1,5:6:15.05:224,15,0	0/1:3,0:3:19.58:20,0,20	0/1:6,2:8:66.88:74,0,67	1/1:0,7:7:2.37:44,2,0	1/1:2,9:11:20.56:313,21,0	1/1:2,8:10:23.83:334,24,0	1/1:5,7:12:26.94:369,27,0	1/1:2,12:14:24.23:458,24,0	1/1:1,6:7:10.16:256,10,0	1/1:1,4:5:8.61:134,9,0	1/1:4,13:17:42.79:575,43,0	1/1:2,9:11:23.14:358,23,0	1/1:0,8:8:20.86:314,21,0	1/1:3,9:12:32.40:408,32,0	1/1:1,8:9:24.08:345,24,0	1/1:1,8:9:23.83:333,24,0	1/1:0,8:8:24.08:359,24,0	1/1:4,4:8:24.05:311,24,0	1/1:3,9:11:20.43:313,20,0	1/1:0,8:8:8.50:134,9,0	1/1:2,7:9:8.40:109,8,0	1/1:1,5:6:8.65:134,9,0	1/1:1,5:6:5.85:90,6,0	1/1:1,11:12:29.35:413,29,0	1/1:2,7:9:27.09:391,27,0	1/1:2,6:8:1.93:167,2,0	1/1:0,2:2:6.02:90,6,0
chr10	78951789	.	GA	G	3486.75	PASS	AC=52;AF=1.000;AN=52;DP=166;FS=0.000;HRun=1;HaplotypeScore=133.0580;InbreedingCoeff=-0.0040;MQ=34.96;MQ0=0;QD=21.13;VQSLOD=3.5187;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:11:32.84:278,33,0	1/1:0,4:4:11.98:112,12,0	./.	./.	1/1:0,6:6:11.46:86,11,0	1/1:1,5:6:17.94:167,18,0	1/1:2,3:5:11.88:82,12,0	1/1:4,5:9:15.52:180,16,0	1/1:2,10:12:26.89:237,27,0	1/1:1,6:7:18.05:207,18,0	1/1:0,4:4:2.51:20,3,0	1/1:2,9:11:32.69:238,33,0	1/1:2,6:8:17.91:145,18,0	1/1:1,10:11:29.84:245,30,0	1/1:0,6:6:17.93:151,18,0	1/1:0,1:1:3.01:38,3,0	1/1:1,4:5:15:168,15,0	1/1:2,3:5:9.47:95,9,0	1/1:3,5:8:12.51:141,13,0	1/1:1,4:5:14.90:119,15,0	1/1:0,3:3:5.95:42,6,0	1/1:0,7:7:14.93:124,15,0	1/1:1,4:5:11.93:88,12,0	1/1:1,2:3:2.54:12,3,0	1/1:3,7:10:17.84:137,18,0	1/1:1,4:5:12.04:143,12,0	1/1:0,6:6:17.94:159,18,0	1/1:0,2:2:6.02:74,6,0
chr10	78956237	.	TTAG	T	4687.95	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.239;DP=883;FS=1.358;HRun=0;HaplotypeScore=128.0944;InbreedingCoeff=0.9971;MQ=77.98;MQ0=0;MQRankSum=-1.479;QD=49.35;ReadPosRankSum=1.836;VQSLOD=7.1327;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,181,4330	0/0:6,0:6:18.02:0,18,387	0/0:28,0:28:84.25:0,84,1847	0/0:29,0:28:84.29:0,84,2007	0/0:35,0:35:99:0,99,2416	1/1:0,28:28:75.26:1397,75,0	1/1:0,36:36:96.33:1788,96,0	0/0:25,0:25:75.26:0,75,1827	1/1:1,30:30:42.35:1502,42,0	0/0:43,0:43:99:0,126,2993	0/0:16,0:16:42.14:0,42,994	0/0:28,0:28:84.29:0,84,2004	0/0:44,0:44:99:0,132,3170	0/0:42,0:42:99:0,126,3061	0/0:48,0:48:99:0,144,3306	0/0:43,0:43:99:0,129,3160	0/0:30,0:30:90.29:0,90,2149	0/0:17,0:17:51.17:0,51,1217	0/0:31,0:31:90.28:0,90,1979	0/0:24,0:24:69.18:0,69,1557	0/0:48,0:48:99:0,141,3374	0/0:30,0:30:84.29:0,84,2030	0/0:29,0:29:81.28:0,81,1938	0/0:26,0:26:78.27:0,78,1892	0/0:29,0:29:87.30:0,87,2136	0/0:25,0:25:75.26:0,75,1814	0/0:27,0:26:81.25:0,81,1841	0/0:24,0:24:69.24:0,69,1699
chr10	78957069	.	TA	T	2206.81	PASS	AB=0.903;AC=20;AF=0.357;AN=56;BaseQRankSum=7.127;DP=533;FS=2.378;HRun=13;HaplotypeScore=62.5377;InbreedingCoeff=0.6662;MQ=82.55;MQ0=1;MQRankSum=2.991;QD=7.94;ReadPosRankSum=3.566;VQSLOD=2.7252;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,31:38:58.65:422,59,0	0/0:5,0:5:12.02:0,12,116	0/1:34,1:23:6.80:7,0,69	0/1:21,1:17:7.87:8,0,15	0/0:21,0:22:35.13:0,35,403	1/1:1,24:25:59.65:438,60,0	1/1:2,15:18:34.83:246,35,0	0/0:19,1:22:19.90:0,20,319	1/1:2,12:16:33.89:231,34,0	0/0:23,1:24:29.29:0,29,483	0/0:7,0:8:20.81:0,21,178	1/1:6,15:22:14.66:261,15,0	1/1:3,12:15:32.80:241,33,0	1/1:2,10:13:16.94:115,17,0	0/1:23,4:28:21.71:22,0,433	0/0:10,0:11:23.86:0,24,214	0/0:17,0:17:39.06:0,39,379	0/0:20,0:21:31.57:0,32,364	0/1:12,3:15:32.73:33,0,180	0/0:20,0:20:45.06:0,45,432	0/0:10,1:11:5.11:0,5,201	0/0:8,0:8:17.90:0,18,159	0/0:17,0:17:27.04:0,27,263	0/0:21,0:21:54.09:0,54,525	0/0:23,1:24:56.83:0,57,518	1/1:9,20:30:32.41:386,32,0	0/0:20,0:22:47.89:0,48,441	0/0:2,0:2:0:0,0,0
chr10	78957974	.	A	AGAG	2245.60	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.003;DP=670;FS=5.062;HRun=0;HaplotypeScore=111.0280;InbreedingCoeff=0.9957;MQ=83.68;MQ0=0;MQRankSum=-1.857;QD=51.04;ReadPosRankSum=-1.786;VQSLOD=5.3848;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,132,2161	0/0:8,0:8:24.08:0,24,399	0/0:26,0:26:64.39:0,64,937	0/0:28,0:28:71.42:0,71,1117	0/0:31,0:31:90.30:0,90,1470	0/0:16,0:16:48.13:0,48,760	0/0:31,0:31:87.22:0,87,1342	0/0:26,0:26:66.19:0,66,1070	0/0:20,0:20:60.19:0,60,965	0/0:18,0:18:54.17:0,54,852	0/0:17,0:17:48.16:0,48,790	0/0:25,0:25:72.19:0,72,1159	0/0:23,0:23:66.21:0,66,1065	0/0:23,0:23:66.23:0,66,1095	0/0:27,0:27:81.28:0,81,1329	0/0:32,0:32:93.26:0,93,1501	0/0:29,0:29:81.19:0,81,1291	0/0:18,0:18:54.18:0,54,881	0/0:19,0:19:57.16:0,57,854	0/0:17,0:17:45.15:0,45,749	0/0:36,0:36:99:0,108,1798	0/0:19,0:19:57.05:0,57,889	0/0:13,0:13:39.13:0,39,641	0/0:25,0:25:66.23:0,66,1092	0/0:24,0:24:69.21:0,69,1104	1/1:7,19:26:19.29:1380,19,0	0/0:27,0:27:81.28:0,81,1348	1/1:2,14:18:45.15:986,45,0
chr10	78958355	.	G	GA	2316.19	PASS	AB=0.786;AC=24;AF=0.429;AN=56;BaseQRankSum=-4.011;DP=718;FS=2.303;HRun=15;HaplotypeScore=102.1310;InbreedingCoeff=0.4320;MQ=78.93;MQ0=11;MQRankSum=1.215;QD=5.95;ReadPosRankSum=-3.677;VQSLOD=1.9707;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:29:27.86:0,28,245	1/1:2,6:9:8.88:62,9,0	0/0:65,0:24:23.64:0,24,183	0/0:62,0:28:12.91:0,13,125	0/1:15,15:32:20.61:216,0,21	0/0:10,0:12:23.16:0,23,119	0/1:14,1:17:36.32:36,0,116	0/1:15,10:29:4.04:115,0,4	0/0:20,0:21:43.10:0,43,245	0/1:27,1:28:0.61:119,0,1	1/1:12,10:23:8.75:160,9,0	0/0:17,0:23:47.16:0,47,266	0/0:21,0:24:45.08:0,45,239	0/0:16,0:20:0.91:0,1,167	0/1:10,15:25:9.04:150,0,9	1/1:8,12:20:14.87:221,15,0	0/0:15,0:19:19.87:0,20,201	0/0:13,0:16:30.46:0,30,173	0/1:17,5:24:53.30:122,0,53	1/1:15,19:37:15.05:272,15,0	0/1:11,15:26:50.24:162,0,50	0/1:11,0:12:5.51:6,0,75	0/0:17,0:18:20.45:0,20,138	0/0:15,1:20:13.24:0,13,172	1/1:11,5:17:16.03:222,16,0	1/1:8,3:25:33.60:271,34,0	1/1:17,21:41:26.99:286,27,0	1/1:7,2:24:13.24:90,13,0
chr10	78958932	.	T	TC	406.49	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-0.275;DP=487;FS=0.873;HRun=1;HaplotypeScore=67.4019;InbreedingCoeff=0.9201;MQ=54.91;MQ0=7;MQRankSum=-1.064;QD=9.68;ReadPosRankSum=1.171;VQSLOD=1.3204;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:67.88:0,68,429	0/0:11,0:11:26.89:0,27,255	0/0:8,0:4:7.30:0,7,33	0/0:5,0:5:10.52:0,11,64	0/0:28,0:29:74.70:0,75,738	0/0:21,0:21:53.22:0,53,364	0/0:19,0:18:41.21:0,41,255	0/0:25,0:25:56.71:0,57,545	0/0:13,0:13:35.44:0,35,232	0/0:18,0:18:44.76:0,45,414	0/0:23,0:23:52.60:0,53,471	1/1:4,10:14:14.97:146,15,0	1/1:3,11:14:14.48:138,14,0	1/1:1,12:13:24:260,24,0	0/0:20,0:19:50.91:0,51,520	0/0:21,0:21:44.95:0,45,480	0/0:32,0:32:72.89:0,73,791	0/0:17,0:17:13.71:0,14,428	0/0:10,0:10:26.96:0,27,268	0/0:13,0:12:32.80:0,33,335	0/0:18,0:18:41.52:0,42,375	0/0:14,0:14:38.83:0,39,354	0/0:10,0:10:26.88:0,27,234	0/0:16,0:15:29.75:0,30,341	0/0:23,0:23:48.20:0,48,446	0/0:18,0:18:29.99:0,30,280	0/0:24,0:23:59.87:0,60,611	0/0:9,0:9:10.09:0,10,87
chr10	78963075	.	GCT	G	1685.35	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.324;DP=706;FS=6.813;HRun=0;HaplotypeScore=83.5657;InbreedingCoeff=0.9996;MQ=88.70;MQ0=0;MQRankSum=-2.551;QD=36.64;ReadPosRankSum=2.317;VQSLOD=5.8220;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.31:0,90,1621	0/0:10,0:10:30.10:0,30,540	0/0:31,0:31:87.30:0,87,1526	0/0:26,0:26:66.01:0,66,1116	0/0:25,0:25:66.21:0,66,1159	0/0:32,0:32:96.33:0,96,1729	0/0:18,0:18:51.16:0,51,877	0/0:46,0:46:99:0,123,2185	0/0:20,0:20:51.17:0,51,918	0/0:22,0:22:63.22:0,63,1133	0/0:17,0:17:51.14:0,51,859	0/0:29,0:29:87.30:0,87,1561	0/0:26,0:26:78.27:0,78,1404	0/0:15,0:15:42.14:0,42,756	0/0:27,0:27:81.28:0,81,1458	0/0:28,0:28:84.29:0,84,1512	0/0:32,0:32:87.30:0,87,1566	0/0:15,0:15:39.13:0,39,702	0/0:20,0:20:60.21:0,60,1081	0/0:29,0:29:87.28:0,87,1532	0/0:29,0:29:81.28:0,81,1457	0/0:25,0:25:75.24:0,75,1322	0/0:23,0:23:57.20:0,57,1020	0/0:28,0:28:78.27:0,78,1404	0/0:28,0:28:81.27:0,81,1430	1/1:2,30:32:90.30:1261,90,0	0/0:28,0:27:78.23:0,78,1404	1/1:1,13:14:39.13:546,39,0
chr10	78964062	.	TG	T	905.26	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.631;DP=718;FS=1.446;HRun=5;HaplotypeScore=67.3488;InbreedingCoeff=0.9957;MQ=86.54;MQ0=0;MQRankSum=0.580;QD=25.15;ReadPosRankSum=1.609;VQSLOD=3.1485;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,1347	0/0:16,0:16:45.15:0,45,615	0/0:27,0:27:71.92:0,72,902	0/0:26,0:26:68.57:0,69,870	0/0:24,0:24:66.21:0,66,887	0/0:30,0:29:81.25:0,81,1087	0/0:25,0:25:72.24:0,72,984	0/0:31,0:31:87.28:0,87,1171	0/0:35,0:35:99:0,105,1405	0/0:26,0:26:69.23:0,69,944	0/0:14,0:14:39.13:0,39,532	0/0:25,0:25:72.23:0,72,969	0/0:34,0:34:99:0,102,1378	0/0:23,0:23:66.21:0,66,887	0/0:33,0:33:96.32:0,96,1313	0/0:33,0:33:93.31:0,93,1272	0/0:22,0:22:63.20:0,63,846	0/0:20,0:20:54.16:0,54,722	0/0:15,0:15:42.13:0,42,557	0/0:30,0:30:87.23:0,87,1122	0/0:36,0:36:99:0,102,1363	0/0:25,0:25:63.16:0,63,825	0/0:14,0:14:42.14:0,42,573	0/0:25,0:25:66.22:0,66,903	0/0:25,0:25:69.22:0,69,929	1/1:2,27:29:40.12:821,40,0	0/0:31,0:31:93.27:0,93,1235	1/1:0,7:7:18.05:204,18,0
chr10	78964304	.	AAC	A	358.17	PASS	AB=0.923;AC=13;AF=0.260;AN=50;BaseQRankSum=3.035;DP=509;FS=8.962;HRun=0;HaplotypeScore=75.0558;InbreedingCoeff=-0.1776;MQ=66.05;MQ0=4;MQRankSum=0.440;QD=1.73;ReadPosRankSum=-0.845;VQSLOD=0.5835;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:9.03:0,9,129	0/0:5,0:5:6.02:0,6,89	./.	./.	0/1:26,3:29:22.70:23,0,460	0/0:13,0:13:12.03:0,12,156	0/0:12,0:16:15:0,15,141	./.	0/0:11,0:18:15:0,15,146	0/1:18,0:18:2.30:2,0,194	0/1:8,1:9:23.38:23,0,80	0/0:10,0:20:3:0,3,26	0/0:14,0:16:5.72:0,6,49	0/0:17,0:20:9.46:0,9,74	0/1:18,0:21:7.88:8,0,249	0/0:23,0:23:27.08:0,27,378	0/1:26,4:30:64.26:64,0,254	0/0:19,1:27:6.70:0,7,385	0/1:14,2:16:32.61:54,0,33	0/1:9,2:11:20.37:20,0,121	0/0:22,0:22:14.08:0,14,171	0/0:15,0:15:18.06:0,18,257	0/1:16,1:17:17.37:17,0,154	0/0:25,0:25:27.09:0,27,396	0/1:8,1:9:23.39:23,0,80	1/1:8,6:16:17.65:149,18,0	0/1:19,2:22:61.83:62,0,150	0/1:8,0:8:15.84:55,0,16
chr10	78966507	.	C	CAAACAATACA	2590.14	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.236;DP=680;FS=2.180;HRun=0;HaplotypeScore=198.0928;InbreedingCoeff=0.9576;MQ=73.25;MQ0=8;MQRankSum=-4.006;QD=74.00;ReadPosRankSum=-1.130;VQSLOD=3.5551;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72:0,72,1602	0/0:13,0:13:36.10:0,36,908	0/0:24,0:13:14.08:0,14,284	0/0:49,0:31:45.88:0,46,801	0/0:16,0:16:23.12:0,23,1072	0/0:22,0:22:59.80:0,60,1083	0/0:21,0:22:54.09:0,54,1339	0/0:24,0:24:66.10:0,66,1073	0/0:30,0:30:69.16:0,69,1688	0/0:25,0:25:69.21:0,69,1699	0/0:19,0:19:51.17:0,51,1482	0/0:18,0:18:48.13:0,48,1081	0/0:20,0:20:51.16:0,51,1463	0/0:24,0:24:66.19:0,66,1717	0/0:38,0:38:99:0,102,2633	0/0:27,0:27:72.16:0,72,1596	0/0:26,0:26:78.14:0,78,2049	0/0:23,0:24:37:0,37,1223	0/0:28,0:28:60.08:0,60,1117	0/0:21,0:21:51.10:0,51,998	0/0:20,0:20:54.11:0,54,1244	0/0:21,0:21:60.17:0,60,1560	0/0:27,0:27:78.15:0,78,1788	0/0:27,0:27:78.16:0,78,1856	0/0:22,0:22:60.15:0,60,1395	1/1:26,6:32:84.21:2501,84,0	0/0:31,0:31:87:0,87,2146	1/1:2,1:3:9:204,9,0
chr10	78966549	.	C	CA	629.48	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.589;DP=724;FS=2.610;HRun=7;HaplotypeScore=85.3335;InbreedingCoeff=0.9910;MQ=67.84;MQ0=10;MQRankSum=-4.541;QD=16.14;ReadPosRankSum=-1.616;VQSLOD=3.4762;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.01:0,78,729	0/0:13,0:13:33.05:0,33,318	0/0:51,0:31:57.82:0,58,586	0/0:49,0:25:47.34:0,47,409	0/0:20,0:20:57.04:0,57,538	0/0:16,0:16:48.08:0,48,463	0/0:25,0:25:60.07:0,60,570	0/0:38,0:38:87.10:0,87,827	0/0:25,0:25:63.08:0,63,603	0/0:37,0:37:99:0,105,1011	0/0:19,0:19:48.07:0,48,463	0/0:18,0:18:54.06:0,54,511	0/0:16,0:16:42.05:0,42,400	0/0:21,0:21:48.07:0,48,463	0/0:27,0:27:72.11:0,72,695	0/0:21,0:21:51.07:0,51,492	0/0:35,0:35:99:0,105,1000	0/0:24,0:24:52.43:0,52,588	0/0:28,0:28:66.08:0,66,632	0/0:18,0:18:51.06:0,51,486	0/0:23,0:23:59.86:0,60,573	0/0:19,0:19:26.50:0,27,432	0/0:32,0:32:72.05:0,72,682	0/0:29,0:29:84.03:0,84,782	0/0:27,0:27:75.04:0,75,703	1/1:16,16:32:44.52:567,45,0	0/0:26,0:26:75.12:0,75,724	1/1:0,6:7:15.05:181,15,0
chr10	78967852	.	CA	C	837.82	PASS	AB=0.923;AC=7;AF=0.125;AN=56;BaseQRankSum=6.565;DP=547;FS=8.118;HRun=7;HaplotypeScore=52.3274;InbreedingCoeff=0.9051;MQ=72.97;MQ0=0;MQRankSum=-3.476;QD=15.23;ReadPosRankSum=1.176;VQSLOD=2.8414;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.12:0,60,721	0/0:8,0:8:21.07:0,21,264	0/1:11,1:12:0.09:0,0,234	0/0:6,0:6:14.78:0,15,152	0/0:31,0:31:87.28:0,87,1094	1/1:3,10:13:27.06:275,27,0	1/1:2,11:13:33.07:337,33,0	0/0:25,0:25:69.21:0,69,846	1/1:5,12:17:36.08:367,36,0	0/0:24,0:24:66.21:0,66,830	0/0:24,0:24:63.19:0,63,780	0/0:22,0:22:63.19:0,63,780	0/0:19,0:19:57.17:0,57,703	0/0:18,0:18:54.17:0,54,679	0/0:22,0:22:57.18:0,57,717	0/0:20,0:20:57.18:0,57,717	0/0:24,0:24:72.22:0,72,892	0/0:14,0:14:39.10:0,39,475	0/0:16,0:16:45.14:0,45,566	0/0:30,0:30:81.26:0,81,1017	0/0:19,0:19:57.18:0,57,717	0/0:21,0:21:60.19:0,60,755	0/0:27,0:27:72.20:0,72,878	0/0:11,0:11:33.11:0,33,415	0/0:21,0:21:57.16:0,57,702	0/0:16,0:16:38.36:0,38,244	0/0:40,0:40:99:0,111,1371	0/0:14,0:14:41.70:0,42,301
chr10	78969020	.	CACTT	C	354.30	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.706;DP=451;FS=0.000;HRun=0;HaplotypeScore=72.5988;InbreedingCoeff=0.9753;MQ=79.86;MQ0=0;MQRankSum=-1.167;QD=32.21;ReadPosRankSum=2.654;VQSLOD=3.2573;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.24:0,69,1796	0/0:6,0:6:18.06:0,18,480	0/0:14,0:14:42.13:0,42,1018	0/0:8,0:8:21.07:0,21,475	0/0:15,0:15:42.14:0,42,1087	0/0:23,0:23:69.24:0,69,1835	0/0:18,0:18:54.16:0,54,1323	0/0:41,0:41:99:0,117,3044	0/0:19,0:19:54.15:0,54,1327	0/0:11,0:11:33.11:0,33,871	0/0:16,0:16:48.16:0,48,1272	0/0:18,0:18:45.15:0,45,1200	0/0:27,0:27:75.26:0,75,1990	0/0:20,0:20:51.04:0,51,1235	0/0:16,0:16:45.15:0,45,1193	0/0:12,0:12:36.12:0,36,926	0/0:18,0:18:54.16:0,54,1380	1/1:1,10:11:24.08:448,24,0	0/0:17,0:17:48.16:0,48,1237	0/0:18,0:18:51.16:0,51,1304	0/0:9,0:9:27.08:0,27,665	0/0:11,0:11:27.09:0,27,681	0/0:13,0:13:39.13:0,39,1009	0/0:10,0:10:30.10:0,30,793	0/0:15,0:15:45.15:0,45,1187	0/0:14,0:14:42.14:0,42,1107	0/0:19,0:19:54.16:0,54,1370	0/0:8,0:8:18.06:0,18,480
chr10	78970980	.	A	AAGACAC	4248.72	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.291;DP=638;FS=0.582;HRun=0;HaplotypeScore=134.9697;InbreedingCoeff=0.9732;MQ=80.75;MQ0=0;MQRankSum=-10.267;QD=44.72;ReadPosRankSum=0.713;VQSLOD=4.3309;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:51.13:0,51,992	0/0:7,0:7:18.06:0,18,384	0/0:35,0:34:46.01:0,46,863	0/0:22,0:22:21.87:0,22,652	0/0:27,0:27:57.19:0,57,1168	0/0:30,0:30:69.22:0,69,1415	0/0:14,0:14:30.10:0,30,607	0/0:23,0:23:39.13:0,39,822	0/0:20,0:20:36.12:0,36,767	0/0:26,0:26:66.22:0,66,1358	0/0:17,0:17:42.14:0,42,848	1/1:14,12:28:36.12:1155,36,0	1/1:25,14:41:54.18:1732,54,0	1/1:14,11:26:42.14:1362,42,0	0/0:26,0:26:63.22:0,63,1303	0/0:29,0:29:66.23:0,66,1407	0/0:23,0:23:51.17:0,51,1068	0/0:10,0:10:24.08:0,24,511	0/0:13,0:13:21.07:0,21,448	0/0:35,0:35:75.26:0,75,1572	0/0:17,0:17:36.12:0,36,736	0/0:20,0:20:45.15:0,45,945	0/0:25,0:25:57.18:0,57,1160	0/0:14,0:14:39.13:0,39,828	0/0:21,0:21:51.16:0,51,1033	0/0:25,0:25:54.16:0,54,1078	0/0:33,0:33:75.26:0,75,1598	0/0:3,0:3:9.03:0,9,192
chr10	78973455	.	G	GGGCATGAGTCATGTAT	21596.19	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-4.630;DP=759;FS=4.003;HRun=0;HaplotypeScore=291.8726;InbreedingCoeff=0.9871;MQ=77.85;MQ0=0;MQRankSum=-14.677;QD=118.01;ReadPosRankSum=0.699;VQSLOD=4.0622;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,15:44:51.17:3477,51,0	0/0:8,0:8:24.08:0,24,1093	0/0:20,0:20:57.10:0,57,1773	0/0:19,0:19:33.30:0,33,1540	0/0:23,0:23:63.19:0,63,2526	1/1:8,7:23:36.12:2637,36,0	1/1:9,5:33:24.08:1748,24,0	0/0:37,0:37:99:0,105,3722	1/1:8,16:34:66.23:4963,66,0	0/0:34,0:34:93.31:0,93,4151	0/0:28,0:28:81.26:0,81,3265	0/0:23,0:23:66.21:0,66,2839	0/0:32,0:32:90.31:0,90,4051	0/0:32,0:32:96.30:0,96,4206	0/0:38,0:38:99:0,108,4527	0/0:29,0:29:84.26:0,84,3319	0/0:25,0:25:75.24:0,75,3196	0/0:15,0:15:45.15:0,45,1924	0/0:24,0:24:69.23:0,69,2784	0/0:20,0:20:54.19:0,54,2222	0/0:32,0:32:84.76:0,85,3499	0/0:30,0:30:81.28:0,81,3478	0/0:27,0:27:75.24:0,75,3151	0/0:40,0:40:99:0,114,4659	0/0:19,0:19:57.17:0,57,2440	1/1:12,21:46:99:8549,132,0	0/0:21,0:21:60.20:0,60,2521	1/1:3,0:3:8.97:222,9,0
chr10	78974245	.	CCT	C	13057.06	PASS	AB=0.514;AC=23;AF=0.411;AN=56;BaseQRankSum=15.980;DP=691;FS=1.237;HRun=0;HaplotypeScore=82.0524;InbreedingCoeff=0.9200;MQ=88.10;MQ0=1;MQRankSum=-3.371;QD=43.09;ReadPosRankSum=2.650;VQSLOD=6.4542;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.25:0,72,1434	1/1:1,12:13:36.12:581,36,0	0/0:27,0:27:71.40:0,71,1449	0/0:30,0:30:90.28:0,90,1765	1/1:0,41:41:99:1877,120,0	0/0:29,0:29:84.22:0,84,1581	0/0:22,0:21:66.23:0,66,1340	1/1:0,32:32:90.12:1307,90,0	0/0:19,1:20:11.39:0,11,1061	1/1:0,35:35:99:1649,105,0	1/1:1,24:25:72.03:1136,72,0	0/0:19,0:19:57.17:0,57,1063	0/0:27,0:27:81.26:0,81,1581	0/0:30,0:30:90.28:0,90,1749	1/1:0,33:33:87.30:1417,87,0	0/1:1,18:19:18.77:593,0,19	0/0:22,0:22:66.21:0,66,1302	0/0:22,0:22:66.19:0,66,1298	1/1:0,18:18:54.18:872,54,0	1/1:0,32:31:87.18:1330,87,0	1/1:0,17:17:36.12:586,36,0	0/0:30,0:30:90.27:0,90,1670	0/0:32,0:32:96.28:0,96,1779	0/0:19,0:19:57.20:0,57,1117	1/1:0,16:16:45.15:733,45,0	0/0:29,0:29:87.28:0,87,1694	1/1:0,22:22:60.20:976,60,0	0/0:5,0:5:15.05:0,15,304
chr10	78975164	.	CGTGT	C	2084.45	PASS	AB=0.754;AC=33;AF=0.660;AN=50;BaseQRankSum=5.577;DP=618;FS=6.309;HRun=0;HaplotypeScore=142.8039;InbreedingCoeff=0.1513;MQ=61.79;MQ0=12;MQRankSum=-5.202;QD=5.03;ReadPosRankSum=1.652;VQSLOD=2.2493;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:38:26.27:26,0,38	1/1:7,3:9:6.02:93,6,0	./.	./.	1/1:13,2:15:8.99:105,9,0	0/1:12,0:19:29.97:30,0,70	0/1:14,0:26:27.48:27,0,128	./.	0/1:19,3:21:4.13:145,0,4	1/1:17,4:19:15.04:214,15,0	0/1:6,5:11:0:1,0,0	1/1:9,0:20:17.61:149,18,0	1/1:7,0:21:10.45:157,10,0	0/1:9,0:20:34.62:45,0,35	1/1:15,17:33:27.05:380,27,0	1/1:13,5:18:9.03:140,9,0	0/1:26,1:28:11.55:12,0,545	0/1:13,0:19:19.99:20,0,68	0/1:10,2:13:40.84:167,0,41	1/1:9,6:16:6.01:74,6,0	0/0:45,0:45:5.59:0,6,43	0/0:15,0:15:9.01:0,9,181	0/0:11,0:12:12.76:0,13,176	0/0:37,0:43:73.07:0,73,1141	1/1:12,8:19:8.98:112,9,0	1/1:20,1:21:8.48:76,8,0	1/1:6,7:14:18.04:225,18,0	1/1:3,2:4:3.01:47,3,0
chr10	78975176	.	T	TCC	3579.84	PASS	AB=0.927;AC=14;AF=0.250;AN=56;BaseQRankSum=-1.437;DP=640;FS=1.325;HRun=0;HaplotypeScore=130.7972;InbreedingCoeff=-0.0903;MQ=50.95;MQ0=21;MQRankSum=-0.478;QD=12.88;ReadPosRankSum=1.609;VQSLOD=3.3341;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:49.62:0,50,691	0/1:12,0:11:2.49:221,0,2	0/0:23,0:7:21.07:0,21,308	0/0:36,0:14:18.10:0,18,400	0/1:14,1:15:87.57:236,0,88	0/0:21,0:21:31.95:0,32,461	0/0:26,0:26:53.83:0,54,634	0/1:8,16:21:60.78:667,0,61	0/0:26,0:23:53.98:0,54,645	0/1:19,0:17:9.55:503,0,10	0/1:13,0:13:45.48:122,0,45	0/1:21,0:21:28.06:28,0,270	0/0:20,0:20:20.70:0,21,321	0/0:21,0:21:32.67:0,33,377	0/1:32,0:32:27.84:515,0,28	0/1:20,0:20:82.34:408,0,82	0/0:28,0:26:73.08:0,73,978	0/0:20,0:20:49.35:0,49,514	0/1:12,0:12:77.10:77,0,178	1/1:16,0:16:17.28:279,17,0	0/1:20,32:52:9.67:10,0,191	0/0:16,0:16:26.97:0,27,396	0/0:9,0:9:17.26:0,17,254	0/0:47,0:47:99:0,114,1610	0/1:27,1:27:43.31:305,0,43	0/0:20,0:19:31.15:0,31,670	0/1:13,0:13:25.22:209,0,25	0/0:4,0:2:2.99:0,3,23
chr10	78976677	.	TC	T	3148.63	PASS	AB=0.520;AC=9;AF=0.161;AN=56;BaseQRankSum=12.637;DP=649;FS=3.955;HRun=1;HaplotypeScore=83.3378;InbreedingCoeff=0.8204;MQ=55.75;MQ0=7;MQRankSum=1.643;QD=34.60;ReadPosRankSum=2.654;VQSLOD=3.8818;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,117,1593	0/0:6,0:6:18.06:0,18,283	0/0:8,0:3:6.02:0,6,96	0/0:9,0:1:3.01:0,3,47	0/0:18,0:18:48.16:0,48,766	0/0:20,0:20:60.20:0,60,854	0/0:26,0:26:72.23:0,72,1002	0/0:29,0:27:75.22:0,75,1163	0/0:14,0:14:42.14:0,42,596	0/0:14,0:13:39.13:0,39,622	0/0:20,0:19:48.15:0,48,744	1/1:0,17:17:45.15:629,45,0	1/1:0,27:27:72.19:1006,72,0	1/1:0,18:18:48.16:670,48,0	0/0:21,0:21:63.20:0,63,984	0/0:23,0:23:69.24:0,69,1102	0/0:42,0:42:99:0,123,1885	0/0:40,0:40:99:0,120,1882	0/0:23,0:22:63.18:0,63,960	0/0:36,0:36:96.96:0,97,1502	0/0:55,0:54:99:0,153,2414	0/0:21,0:21:60.19:0,60,936	0/0:13,0:13:27.09:0,27,431	0/0:37,0:37:99:0,108,1726	0/0:13,0:13:36.12:0,36,572	0/1:1,12:13:8.85:464,0,9	0/0:27,0:27:78.13:0,78,1175	1/1:3,13:16:39.13:545,39,0
chr10	78977487	.	A	AC	1122.63	PASS	AB=0.960;AC=29;AF=0.630;AN=46;BaseQRankSum=1.670;DP=640;FS=5.509;HRun=0;HaplotypeScore=66.5466;InbreedingCoeff=0.3639;MQ=21.31;MQ0=188;MQRankSum=-0.413;QD=3.94;ReadPosRankSum=-3.791;VQSLOD=1.8539;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:95,0:8:31.32:31,0,36	0/1:6,0:6:1.08:64,0,1	./.	./.	1/1:16,0:15:25.79:184,26,0	1/1:12,3:12:3.64:114,4,0	0/0:24,0:3:1.55:0,2,4	1/1:15,0:7:0.85:2,1,0	1/1:8,1:5:0.56:15,1,0	0/1:11,0:10:3.96:21,0,4	1/1:10,0:9:2.10:79,2,0	1/1:5,1:3:5.95:55,6,0	1/1:10,0:6:7.17:70,7,0	0/0:4,1:4:3.37:0,3,9	0/1:9,1:8:4.39:29,0,4	0/1:7,1:8:2.24:65,0,2	0/0:122,1:18:21.04:0,21,272	./.	1/1:7,0:6:7.86:23,8,0	1/1:18,0:17:18.50:248,18,0	./.	0/0:27,0:23:56.69:0,57,600	0/0:26,0:22:42.05:0,42,542	0/0:44,0:14:20.98:0,21,249	1/1:15,0:12:6.17:132,6,0	1/1:22,1:17:2.28:20,2,0	1/1:11,0:8:10.36:115,10,0	./.
chr10	78977672	.	G	GA	9260.71	PASS	AC=50;AF=0.962;AN=52;BaseQRankSum=-1.626;DP=476;FS=0.000;HRun=3;HaplotypeScore=51.8466;InbreedingCoeff=0.4264;MQ=29.03;MQ0=25;MQRankSum=-1.413;QD=20.63;ReadPosRankSum=0.091;VQSLOD=4.1063;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,5:9:15.05:208,15,0	1/1:0,18:17:33.07:439,33,0	0/0:5,0:1:2.99:0,3,23	./.	1/1:2,19:15:11.93:122,12,0	1/1:6,14:16:36.12:502,36,0	1/1:1,3:2:3.01:42,3,0	1/1:11,1:3:3.01:42,3,0	1/1:6,15:19:48.09:627,48,0	1/1:5,16:15:36.12:503,36,0	1/1:4,14:14:23.99:291,24,0	1/1:2,10:11:24.08:335,24,0	1/1:4,21:21:39.13:544,39,0	1/1:3,11:14:33.08:436,33,0	1/1:4,16:18:24.08:335,24,0	1/1:2,12:13:12.01:143,12,0	1/1:3,11:14:15.05:209,15,0	1/1:2,6:6:9.03:120,9,0	1/1:5,10:10:27.09:377,27,0	1/1:2,34:30:72.24:1005,72,0	./.	1/1:1,24:23:48.16:670,48,0	1/1:1,23:23:41.89:580,42,0	1/1:4,5:6:6.02:84,6,0	1/1:3,24:20:33.07:439,33,0	1/1:7,15:17:27.09:377,27,0	1/1:3,16:17:48.16:665,48,0	1/1:2,14:16:12.04:168,12,0
chr10	78978494	.	CCA	C	4073.85	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=0.889;DP=352;FS=5.550;HRun=0;HaplotypeScore=69.8915;InbreedingCoeff=0.7743;MQ=73.04;MQ0=10;MQRankSum=-5.214;QD=27.16;ReadPosRankSum=-1.359;VQSLOD=4.0286;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:14.19:73,14,0	1/1:0,3:2:6.02:88,6,0	0/0:69,0:27:19.22:0,19,366	0/0:45,0:21:31.64:0,32,284	1/1:5,12:16:39.11:551,39,0	0/0:5,0:5:14.92:0,15,110	0/1:4,0:4:5.68:6,0,64	1/1:13,14:26:78:904,78,0	0/1:8,0:8:0.32:0,0,99	1/1:1,8:8:24.08:351,24,0	1/1:5,4:9:24.02:278,24,0	0/0:8,0:8:4.37:0,4,136	0/0:2,0:2:5.97:0,6,50	0/1:7,0:7:1.38:1,0,101	1/1:6,6:11:31.93:329,32,0	1/1:3,4:6:18:228,18,0	0/0:13,0:13:33.07:0,33,583	0/0:14,0:14:36.11:0,36,443	1/1:8,6:12:29.83:349,30,0	1/1:3,8:11:27.06:372,27,0	1/1:0,1:1:3.01:44,3,0	0/0:12,0:12:33:0,33,409	0/0:11,0:11:30.10:0,30,534	0/0:7,0:7:13.77:0,14,246	1/1:0,9:9:24.08:351,24,0	0/0:12,0:12:36.09:0,36,600	1/1:2,3:4:12.02:148,12,0	0/0:4,0:4:12.04:0,12,213
chr10	78978495	.	CAA	C	1721.44	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=4.385;DP=362;FS=7.422;HRun=9;HaplotypeScore=84.7110;InbreedingCoeff=0.8778;MQ=73.33;MQ0=10;MQRankSum=-5.923;QD=13.04;ReadPosRankSum=1.647;VQSLOD=1.1273;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,6:7:14.98:156,15,0	1/1:3,0:2:6:52,6,0	0/0:69,1:29:39.30:0,39,414	0/0:45,0:21:13.70:0,14,235	1/1:17,0:16:35.89:298,36,0	0/0:8,0:8:23.86:0,24,294	0/0:4,0:4:9.03:0,9,143	1/1:28,0:27:33.13:265,33,0	0/0:8,0:8:18.05:0,18,249	1/1:9,0:8:23.74:174,24,0	1/1:8,0:8:13.86:118,14,0	0/0:9,0:9:17.06:0,17,191	0/0:3,0:3:6.02:0,6,68	0/0:8,0:8:13.44:0,13,140	1/1:13,0:12:18.82:150,19,0	1/1:8,0:7:13.36:115,13,0	0/0:13,0:13:36.08:0,36,527	0/0:14,0:14:36.45:0,36,414	1/1:13,0:11:3.79:125,4,0	1/1:11,0:11:23.92:198,24,0	1/1:1,0:1:2.99:24,3,0	0/0:12,0:12:18.06:0,18,291	0/0:9,0:11:30.08:0,30,443	0/0:7,0:7:10.77:0,11,193	1/1:9,0:9:23.91:196,24,0	0/0:12,0:12:30.08:0,30,445	1/1:5,0:4:7.91:67,8,0	0/0:4,0:4:12.02:0,12,149
chr10	78978508	.	AT	A	1127.87	PASS	AB=0.951;AC=31;AF=0.554;AN=56;BaseQRankSum=8.298;DP=329;FS=9.344;HRun=1;HaplotypeScore=74.6800;InbreedingCoeff=0.4378;MQ=61.42;MQ0=10;MQRankSum=-7.501;QD=6.79;ReadPosRankSum=2.965;VQSLOD=0.2546;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:19.21:99,19,0	1/1:4,0:3:8.04:33,8,0	0/0:51,1:19:4.25:0,4,328	0/0:38,1:15:21.21:0,21,170	1/1:14,1:14:36.77:173,37,0	1/1:8,1:9:20.03:102,20,0	0/1:4,0:4:13.91:14,0,35	0/1:30,0:29:55.48:55,0,104	0/1:6,0:6:6.69:25,0,7	0/1:9,0:8:25.66:34,0,26	1/1:6,0:6:16.63:77,17,0	1/1:8,1:9:16.70:83,17,0	1/1:4,0:4:3.85:23,4,0	1/1:6,0:6:1.86:58,2,0	1/1:14,0:13:35.13:153,35,0	0/1:7,1:7:5.29:65,0,5	0/0:13,0:13:31.60:0,32,422	0/0:15,0:15:23.46:0,23,458	0/1:7,3:8:0.89:109,0,1	1/1:10,0:10:26.95:113,27,0	1/1:1,0:1:2.74:12,3,0	0/0:8,0:8:21.06:0,21,285	0/0:14,0:14:39.11:0,39,513	0/0:6,0:6:6.70:0,7,98	1/1:8,0:8:19.22:78,19,0	0/0:12,0:12:36.11:0,36,474	0/1:5,0:4:9.39:13,0,9	0/0:3,0:3:9.03:0,9,122
chr10	78978509	.	TA	T	3553.02	PASS	AB=0.667;AC=37;AF=0.661;AN=56;BaseQRankSum=5.884;DP=329;FS=13.119;HRun=8;HaplotypeScore=67.5232;InbreedingCoeff=0.7922;MQ=61.32;MQ0=11;MQRankSum=-5.994;QD=21.66;ReadPosRankSum=1.071;VQSLOD=3.1875;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,7:8:20.62:183,21,0	1/1:1,3:3:9.01:87,9,0	0/0:51,0:19:25.35:0,25,318	0/0:42,0:16:18.96:0,19,155	1/1:3,12:14:41.90:390,42,0	1/1:4,5:9:14.33:169,14,0	1/1:2,1:3:3:29,3,0	1/1:10,20:29:68.97:642,69,0	1/1:1,5:6:12.02:116,12,0	1/1:3,6:8:18.03:174,18,0	1/1:0,6:6:18.03:174,18,0	1/1:2,7:9:13.60:192,14,0	0/1:2,2:4:1.94:49,0,2	1/1:2,4:6:3.06:121,3,0	1/1:2,12:13:33.07:339,33,0	1/1:3,4:7:16.45:134,16,0	0/0:13,0:13:36.04:0,36,414	0/0:15,0:15:33.95:0,34,384	1/1:6,4:8:21.02:196,21,0	1/1:0,10:10:30.05:289,30,0	1/1:0,1:1:3:29,3,0	0/0:8,0:8:21.06:0,21,254	0/0:14,0:14:36.11:0,36,435	0/0:5,0:5:7.50:0,7,99	1/1:1,7:8:4.45:183,4,0	0/0:12,0:12:36.11:0,36,435	1/1:3,2:4:6.01:58,6,0	0/0:3,0:3:9.03:0,9,109
chr10	78978556	.	A	ACC	186.92	PASS	AB=0.828;AC=3;AF=0.054;AN=56;BaseQRankSum=-0.168;DP=403;FS=1.060;HRun=0;HaplotypeScore=93.9299;InbreedingCoeff=-0.0700;MQ=64.41;MQ0=16;MQRankSum=-1.698;QD=5.66;ReadPosRankSum=0.911;VQSLOD=2.8985;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:15.04:0,15,172	0/0:7,0:7:9.76:0,10,76	0/0:47,0:16:25.65:0,26,259	0/0:42,0:18:15.17:0,15,231	0/0:15,0:15:28:0,28,198	0/1:11,1:12:35.96:36,0,204	0/1:9,2:9:83.28:83,0,117	0/0:31,0:31:64.69:0,65,730	0/1:6,4:10:78.91:167,0,79	0/0:14,0:13:32.44:0,32,320	0/0:9,0:8:18.32:0,18,152	0/0:9,0:9:21.54:0,22,281	0/0:14,0:14:30.17:0,30,342	0/0:14,0:14:33.71:0,34,395	0/0:21,0:21:54.65:0,55,529	0/0:11,0:10:21.53:0,22,192	0/0:13,0:13:32.84:0,33,425	0/0:18,0:18:45.09:0,45,593	0/0:6,0:5:11.14:0,11,94	0/0:12,0:12:32.59:0,33,297	0/0:4,0:3:6.02:0,6,74	0/0:10,0:10:24.08:0,24,334	0/0:13,0:13:36.11:0,36,499	0/0:10,0:10:22.31:0,22,281	0/0:5,0:5:8.20:0,8,76	0/0:18,0:17:46.45:0,46,619	0/0:14,0:14:37.55:0,38,404	0/0:5,0:4:12.04:0,12,165
chr10	78978563	.	A	AC	2894.10	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=0.607;DP=302;FS=32.705;HRun=3;HaplotypeScore=55.5217;InbreedingCoeff=0.8549;MQ=74.09;MQ0=11;MQRankSum=-3.925;QD=16.44;ReadPosRankSum=0.223;VQSLOD=1.7063;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:8.95:66,9,0	1/1:6,0:6:8.95:67,9,0	0/0:31,0:13:20.07:0,20,189	0/0:26,0:15:14.56:0,15,129	1/1:7,1:8:11.97:98,12,0	1/1:8,2:10:26.95:230,27,0	1/1:7,0:7:11.88:86,12,0	1/1:27,2:29:71.41:568,71,0	1/1:4,0:4:12.01:109,12,0	1/1:7,0:7:20.88:164,21,0	1/1:10,0:10:12.44:97,12,0	1/1:8,0:8:17.60:127,18,0	1/1:11,0:11:22.90:154,23,0	1/1:9,0:11:28.61:218,29,0	1/1:11,1:13:36.36:298,36,0	1/1:7,0:6:14.89:113,15,0	0/0:11,0:11:17.91:0,18,142	0/0:13,0:13:26.86:0,27,222	1/1:7,0:7:20.88:167,21,0	1/1:6,0:6:14.92:114,15,0	1/1:4,0:3:5.98:46,6,0	0/0:7,0:7:11.87:0,12,85	0/0:9,0:9:11.86:0,12,94	0/0:11,0:11:20.89:0,21,170	1/1:1,0:1:2.99:23,3,0	0/0:14,0:13:6.98:0,7,179	1/1:18,1:19:48.05:350,48,0	0/0:4,0:3:2.95:0,3,19
chr10	78978848	.	CAA	C	5954.99	PASS	AB=0.615;AC=37;AF=0.661;AN=56;BaseQRankSum=7.057;DP=470;FS=0.428;HRun=13;HaplotypeScore=75.2116;InbreedingCoeff=0.8339;MQ=71.84;MQ0=2;MQRankSum=-1.246;QD=18.44;ReadPosRankSum=1.712;VQSLOD=4.2335;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,11:15:30.01:291,30,0	1/1:0,6:7:5.94:108,6,0	0/0:13,0:10:16.08:0,16,124	0/0:21,0:11:7.39:0,7,86	1/1:5,20:27:7.26:454,7,0	1/1:2,0:16:29.61:146,30,0	1/1:0,0:7:13.72:59,14,0	1/1:5,23:30:68.77:643,69,0	1/1:2,0:15:24.31:103,24,0	1/1:2,23:24:63.05:605,63,0	1/1:3,19:23:44.95:485,45,0	0/1:3,5:8:12.67:75,0,13	1/1:5,10:15:27:262,27,0	1/1:3,17:20:42.05:407,42,0	1/1:4,17:21:47.77:448,48,0	1/1:0,13:15:26.72:294,27,0	0/0:16,1:19:21.02:0,21,578	0/0:16,0:18:41.56:0,42,508	1/1:2,11:13:32.94:307,33,0	1/1:4,11:16:35.78:331,36,0	1/1:1,6:7:12.01:116,12,0	0/0:6,0:6:15.04:0,15,199	0/0:22,0:23:59.67:0,60,801	0/0:11,0:11:12.03:0,12,154	1/1:2,16:18:1.61:363,2,0	0/0:23,0:24:63.19:0,63,865	1/1:3,20:24:41.97:457,42,0	0/0:9,0:9:20.56:0,21,269
chr10	78981770	.	AG	A	18713.99	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=12.937;DP=744;FS=2.661;HRun=2;HaplotypeScore=90.2386;InbreedingCoeff=0.9999;MQ=80.38;MQ0=0;MQRankSum=-2.544;QD=34.21;ReadPosRankSum=1.996;VQSLOD=5.1202;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,45:45:99:1478,114,0	1/1:0,13:13:39.13:506,39,0	0/0:17,0:17:31.40:0,31,460	0/0:21,0:21:37.45:0,37,447	1/1:0,26:26:72.20:915,72,0	1/1:0,24:24:72.23:933,72,0	1/1:1,22:23:60.19:778,60,0	1/1:2,39:41:99:1375,111,0	1/1:0,27:27:72.23:932,72,0	1/1:0,41:41:99:1536,123,0	1/1:1,22:23:60.15:759,60,0	1/1:1,18:19:45.15:582,45,0	1/1:1,34:35:87:1126,87,0	1/1:0,21:21:54.18:700,54,0	1/1:0,35:35:81.26:1051,81,0	1/1:0,32:32:87.28:1129,87,0	0/0:26,0:26:75.20:0,75,1046	0/0:18,0:18:54.17:0,54,778	1/1:0,29:29:87.28:1116,87,0	1/1:0,32:32:96.30:1233,96,0	1/1:0,24:24:63.20:817,63,0	0/0:19,0:19:57.19:0,57,842	0/0:24,0:24:69.22:0,69,996	0/0:18,0:18:51.15:0,51,716	1/1:0,30:30:69.22:895,69,0	0/0:35,1:36:60.39:0,60,1347	1/1:1,26:26:66.21:854,66,0	0/0:18,0:18:54.17:0,54,778
chr10	78982005	.	C	CGTGT	1574.46	PASS	AB=1.000;AC=13;AF=0.260;AN=50;BaseQRankSum=-1.183;DP=822;FS=3.489;HRun=0;HaplotypeScore=166.3581;InbreedingCoeff=0.8394;MQ=62.82;MQ0=6;MQRankSum=-1.767;QD=7.22;ReadPosRankSum=-0.803;VQSLOD=2.8946;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:17,0:17:29.83:0,30,439	./.	./.	0/0:24,0:26:33.10:0,33,499	1/1:19,0:26:5.86:84,6,0	1/1:24,0:33:12.48:173,12,0	0/0:44,0:44:20.50:0,21,310	1/1:20,1:27:2.93:52,3,0	0/0:34,0:35:35.20:0,35,466	0/0:17,0:22:30.08:0,30,436	1/1:20,18:41:29.84:656,30,0	1/1:14,16:31:21.07:499,21,0	1/1:6,12:20:12.04:273,12,0	0/0:36,0:40:75.23:0,75,1128	0/0:37,0:38:59.61:0,60,1004	0/0:26,0:29:43.98:0,44,652	0/1:36,0:38:4.31:4,0,800	0/0:19,0:20:18.01:0,18,246	0/0:26,0:26:48.16:0,48,756	0/0:39,0:40:23.16:0,23,602	0/0:17,0:18:15.04:0,15,216	0/0:10,0:12:18.04:0,18,244	0/0:38,0:40:60.19:0,60,900	0/0:25,0:29:45.12:0,45,632	0/0:25,0:25:39.13:0,39,597	0/0:34,0:36:72.23:0,72,1100	0/0:15,0:14:24.05:0,24,355
chr10	78986614	.	T	TAAAG	22977.97	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-12.737;DP=511;FS=0.375;HRun=0;HaplotypeScore=65.7406;InbreedingCoeff=0.9864;MQ=75.24;MQ0=2;MQRankSum=-3.989;QD=64.36;ReadPosRankSum=-0.526;VQSLOD=6.2915;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:14:30.06:696,30,0	1/1:0,5:5:12.04:320,12,0	0/0:15,0:14:36.12:0,36,640	0/0:11,0:11:17.80:0,18,308	1/1:2,28:30:81.21:1966,81,0	1/1:1,22:23:63.22:1680,63,0	1/1:1,6:6:12:260,12,0	1/1:7,23:30:78.25:1972,78,0	1/1:3,11:14:21.07:518,21,0	1/1:2,16:19:54.17:1348,54,0	1/1:2,20:22:57.20:1518,57,0	1/1:0,16:16:33.11:880,33,0	1/1:3,18:20:51.13:1300,51,0	1/1:1,9:10:24.04:579,24,0	1/1:0,18:18:48.12:1220,48,0	1/1:0,22:22:57.16:1460,57,0	0/0:12,0:12:33.09:0,33,583	0/0:20,0:20:54.18:0,54,997	1/1:3,12:16:48.16:1177,48,0	1/1:0,28:28:81.28:2077,81,0	1/1:2,9:11:27.05:659,27,0	0/0:15,0:15:33.11:0,33,615	0/0:26,0:26:75.24:0,75,1344	0/0:7,0:7:18.04:0,18,297	1/1:2,22:26:66.23:1717,66,0	0/0:35,0:35:41.43:0,41,1644	1/1:3,21:24:66.18:1631,66,0	0/0:13,0:13:39.13:0,39,728
chr10	78991104	.	CT	C	6941.47	PASS	AB=0.965;AC=40;AF=0.714;AN=56;BaseQRankSum=11.016;DP=636;FS=4.762;HRun=11;HaplotypeScore=117.1127;InbreedingCoeff=0.7900;MQ=64.44;MQ0=11;MQRankSum=-3.676;QD=14.37;ReadPosRankSum=-1.008;VQSLOD=4.3125;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,36:49:99:910,111,0	1/1:3,5:8:14.96:123,15,0	0/1:42,1:20:18.14:18,0,113	0/1:37,1:16:22.53:23,0,145	1/1:7,15:22:53.91:442,54,0	1/1:6,7:12:23.94:196,24,0	1/1:4,17:21:44.89:369,45,0	1/1:20,22:42:74.87:615,75,0	1/1:10,14:24:47.88:391,48,0	1/1:10,11:21:32.45:270,32,0	1/1:11,19:30:65.78:541,66,0	1/1:4,8:12:29.96:246,30,0	1/1:3,7:11:29:227,29,0	1/1:7,8:15:3.95:239,4,0	1/1:7,11:18:38.93:320,39,0	1/1:3,17:20:56.93:468,57,0	0/0:34,2:36:21.56:0,22,778	0/0:20,0:21:35.43:0,35,429	1/1:9,14:22:21.60:370,22,0	1/1:3,19:22:24.67:410,25,0	1/1:3,3:5:8.97:74,9,0	0/0:23,0:24:62.71:0,63,616	0/0:15,0:16:38.92:0,39,392	0/0:16,0:16:30.03:0,30,313	1/1:10,5:14:22.76:177,23,0	0/0:23,0:24:53.83:0,54,533	1/1:10,16:26:62.86:513,63,0	0/0:15,0:16:41.94:0,42,430
chr10	78991121	.	TTC	T	4057.46	PASS	AB=0.987;AC=29;AF=0.518;AN=56;BaseQRankSum=4.414;DP=670;FS=14.526;HRun=0;HaplotypeScore=143.8059;InbreedingCoeff=0.5886;MQ=59.12;MQ0=14;MQRankSum=0.022;QD=9.26;ReadPosRankSum=-5.156;VQSLOD=1.0509;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:46,1:47:99:171,0,158	1/1:6,0:6:10.94:60,11,0	0/1:59,0:23:34.76:35,0,265	0/0:45,0:16:10.29:0,10,268	1/1:23,1:24:0.01:183,0,0	0/1:14,0:13:19.84:39,0,20	0/1:24,0:24:84.50:116,0,85	1/1:41,2:42:67.73:580,68,0	0/1:21,0:22:41.83:42,0,58	1/1:23,0:23:55.36:379,55,0	1/1:28,1:29:65.22:399,65,0	0/0:10,0:10:30.01:0,30,329	0/0:15,0:15:34.85:0,35,382	0/0:14,0:14:36.07:0,36,415	1/1:22,0:22:50.21:290,50,0	1/1:20,1:21:52.21:325,52,0	0/0:30,0:30:76.07:0,76,1158	0/0:19,0:19:48:0,48,707	1/1:26,2:27:59.04:416,59,0	1/1:27,2:29:47.89:376,48,0	1/1:5,0:4:9.59:51,10,0	0/0:28,0:28:73.87:0,74,1008	0/0:17,0:17:51.09:0,51,691	0/0:16,0:16:42.10:0,42,629	1/1:10,2:12:33.96:259,34,0	0/0:24,0:24:61.01:0,61,743	1/1:30,0:30:20.91:340,21,0	0/0:14,0:14:33.11:0,33,500
chr10	78991125	.	C	CT	981.60	PASS	AB=0.987;AC=11;AF=0.196;AN=56;BaseQRankSum=3.691;DP=669;FS=1.030;HRun=1;HaplotypeScore=147.0398;InbreedingCoeff=0.6610;MQ=62.11;MQ0=12;MQRankSum=1.570;QD=5.01;ReadPosRankSum=-0.647;VQSLOD=0.0817;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,17:48:31.21:469,31,0	0/1:5,0:5:4.42:16,0,4	0/1:58,0:24:24.87:25,0,356	0/0:44,0:16:17.36:0,17,263	0/0:26,0:26:4.68:0,5,67	1/1:5,0:12:23.04:128,23,0	1/1:15,2:24:37.43:212,37,0	0/0:37,0:39:40.86:0,41,148	1/1:16,3:22:39.66:295,40,0	0/1:23,1:24:3.79:4,0,58	0/0:29,0:29:8.05:0,8,77	0/0:11,0:11:29.70:0,30,255	0/0:15,0:15:32.66:0,33,241	0/0:15,0:15:33.20:0,33,290	0/0:24,0:24:22:0,22,75	0/0:22,0:22:25.42:0,25,88	0/0:30,0:30:83.34:0,83,1014	0/0:19,0:19:53.54:0,54,662	0/0:25,0:25:31.82:0,32,107	0/0:26,0:27:30.12:0,30,98	0/0:6,0:5:3.33:0,3,9	0/0:28,0:28:83.02:0,83,993	0/0:18,0:18:54.15:0,54,664	0/0:16,0:16:41.76:0,42,541	0/0:14,0:14:17.90:0,18,54	0/0:23,0:23:69.21:0,69,865	0/0:28,0:29:36.97:0,37,117	0/0:11,0:11:32.68:0,33,383
chr10	78991126	.	TC	T	8469.25	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=7.182;DP=670;FS=0.000;HRun=1;HaplotypeScore=118.2911;InbreedingCoeff=0.9551;MQ=62.10;MQ0=11;MQRankSum=0.187;QD=22.46;ReadPosRankSum=-2.548;VQSLOD=4.0881;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:49,0:49:84.78:469,85,0	1/1:1,3:4:12.03:147,12,0	0/0:59,0:23:0.09:0,0,240	0/0:45,0:16:23.03:0,23,256	1/1:10,16:26:53.99:547,54,0	1/1:13,0:12:28.27:152,28,0	1/1:24,0:24:50.93:292,51,0	1/1:26,13:39:96.63:1002,97,0	1/1:20,1:21:43.95:242,44,0	1/1:12,12:24:71.27:747,71,0	1/1:11,19:30:77.37:853,77,0	0/0:12,0:12:29.76:0,30,215	0/0:15,0:15:29.63:0,30,256	0/0:15,0:15:35.76:0,36,289	1/1:5,19:24:53.14:618,53,0	1/1:10,12:22:61.63:675,62,0	0/0:29,0:29:71.40:0,71,874	0/0:18,1:19:17.24:0,17,519	1/1:10,14:24:71.64:721,72,0	1/1:13,15:28:51.13:681,51,0	1/1:2,4:5:15.02:161,15,0	0/0:29,0:29:79.39:0,79,852	0/0:18,0:18:54.04:0,54,591	0/0:16,0:16:42.02:0,42,514	1/1:6,8:14:35.43:339,35,0	0/0:24,0:24:67.05:0,67,697	1/1:13,16:29:68.81:821,69,0	0/0:11,0:11:32.99:0,33,359
chr10	78991127	.	CT	C	1442.95	PASS	AB=0.991;AC=19;AF=0.339;AN=56;BaseQRankSum=2.760;DP=682;FS=3.555;HRun=12;HaplotypeScore=145.0089;InbreedingCoeff=0.4231;MQ=64.80;MQ0=11;MQRankSum=-2.884;QD=4.27;ReadPosRankSum=0.467;VQSLOD=1.4296;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:88.43:0,88,551	1/1:4,0:4:8.73:53,9,0	0/1:57,2:25:6.80:7,0,187	0/0:47,1:19:20.66:0,21,173	0/1:27,0:27:69.27:110,0,69	0/0:13,0:12:25.79:0,26,138	0/0:23,0:23:46.84:0,47,266	0/1:39,0:39:18.68:153,0,19	0/0:20,0:20:32.22:0,32,253	0/1:25,0:25:4.10:130,0,4	1/1:29,0:29:2.41:188,2,0	0/0:4,0:15:20:0,20,105	0/0:5,0:16:34.63:0,35,195	0/0:7,0:15:28.90:0,29,172	1/1:24,0:24:23.40:185,23,0	1/1:22,0:22:18.59:177,19,0	0/0:28,1:29:51.01:0,51,640	0/0:18,1:19:14.18:0,14,365	1/1:25,0:25:23.88:164,24,0	0/1:28,0:28:20.13:158,0,20	1/1:7,0:6:6.54:36,7,0	0/0:29,0:29:60.10:0,60,593	0/0:17,0:17:39.08:0,39,395	0/0:17,0:17:39.04:0,39,390	0/1:16,0:16:9.02:61,0,9	0/0:21,1:23:17.98:0,18,381	0/1:29,0:29:23.81:205,0,24	0/0:10,0:11:26.82:0,27,246
chr10	78992354	.	A	AGCTG	16505.34	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-16.231;DP=764;FS=3.523;HRun=0;HaplotypeScore=117.3895;InbreedingCoeff=0.9965;MQ=79.90;MQ0=0;MQRankSum=-7.513;QD=50.79;ReadPosRankSum=0.093;VQSLOD=5.7261;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:64:99:0,181,3196	1/1:0,6:6:15.05:389,15,0	0/0:21,0:21:50.95:0,51,831	0/0:25,0:25:48.09:0,48,739	1/1:5,17:20:36.04:818,36,0	0/0:25,0:24:60.21:0,60,1074	0/0:25,0:25:54.66:0,55,972	1/1:13,17:32:69.22:1630,69,0	0/0:27,0:27:75.26:0,75,1341	1/1:3,20:20:54.15:1288,54,0	1/1:4,16:16:27.09:701,27,0	0/0:24,0:24:66.23:0,66,1174	0/0:22,0:20:51.17:0,51,917	0/0:25,0:25:60.19:0,60,1046	1/1:3,38:43:99:2568,99,0	1/1:3,22:26:54.19:1398,54,0	0/0:41,0:41:99:0,120,2128	0/0:16,0:15:45.14:0,45,764	1/1:10,17:27:63.17:1438,63,0	1/1:2,22:22:48.16:1245,48,0	1/1:9,35:45:90.31:2290,90,0	0/0:26,0:26:75.24:0,75,1305	0/0:23,0:23:60.21:0,60,1074	0/0:41,0:41:99:0,105,1792	1/1:3,29:32:72.25:1868,72,0	0/0:25,0:25:69.24:0,69,1237	1/1:3,20:18:35.71:872,36,0	0/0:9,0:8:18.06:0,18,324
chr10	78992548	.	TAC	T	3903.58	PASS	AB=0.811;AC=25;AF=0.481;AN=52;BaseQRankSum=11.324;DP=715;FS=6.939;HRun=0;HaplotypeScore=96.1654;InbreedingCoeff=0.1374;MQ=37.07;MQ0=134;MQRankSum=-5.626;QD=9.16;ReadPosRankSum=-7.338;VQSLOD=0.8095;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:17,11:22:60.05:448,0,60	0/1:9,8:9:37.54:110,0,38	./.	./.	1/1:13,4:9:12.41:111,12,0	0/1:2,10:11:28.39:260,0,28	1/1:11,2:9:12:127,12,0	0/0:4,0:1:3.01:0,3,53	1/1:8,8:12:18.06:240,18,0	0/1:21,4:14:28.54:260,0,29	1/1:16,0:12:15.04:187,15,0	1/1:10,10:13:18.06:233,18,0	1/1:14,8:18:27.50:320,28,0	1/1:3,17:18:27.09:365,27,0	0/1:41,8:28:99:290,0,114	0/1:32,7:22:24.10:184,0,24	0/0:33,0:27:54.14:0,54,895	0/0:24,0:22:51.17:0,51,875	0/1:13,2:8:99:136,0,137	0/1:17,3:12:3.80:215,0,4	0/1:31,4:18:32.69:33,0,41	0/0:39,0:28:48.15:0,48,814	0/0:22,0:15:27.08:0,27,447	0/0:61,0:50:72.03:0,72,1144	0/1:35,4:26:77.37:128,0,77	0/0:35,1:22:57.20:0,57,988	0/1:19,4:13:24.29:259,0,24	0/0:29,0:23:51.17:0,51,894
chr10	78992567	.	TAC	T	728.76	PASS	AB=0.924;AC=20;AF=0.400;AN=50;BaseQRankSum=6.328;DP=765;FS=7.083;HRun=0;HaplotypeScore=79.6692;InbreedingCoeff=0.0742;MQ=29.92;MQ0=217;MQRankSum=-6.087;QD=2.08;ReadPosRankSum=-2.797;VQSLOD=0.2661;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,2:20:25.73:0,26,397	0/1:16,0:4:19.27:19,0,37	./.	./.	1/1:16,1:5:1.83:23,2,0	0/1:5,5:9:37.51:146,0,38	./.	0/0:19,0:3:6.02:0,6,105	1/1:3,8:7:3.01:41,3,0	0/1:27,0:9:31.40:31,0,57	0/1:15,0:8:33.03:34,0,33	1/1:11,8:8:6.02:81,6,0	0/1:13,9:8:0.51:73,0,1	1/1:8,9:10:6.02:76,6,0	0/1:51,3:26:62.61:63,0,153	0/0:34,1:12:12.04:0,12,157	0/0:34,0:26:42.13:0,42,707	0/0:22,0:20:39.13:0,39,671	0/1:10,0:5:28.51:29,0,107	0/1:20,1:6:26.91:147,0,27	1/1:35,14:14:7.72:88,8,0	0/1:37,0:24:4.51:5,0,418	0/0:23,0:15:24.08:0,24,411	0/0:70,0:52:78.25:0,78,1299	0/0:33,13:23:6.02:0,6,79	0/0:32,0:16:42.14:0,42,721	0/1:25,1:6:30.74:31,0,36	0/0:26,0:18:42.14:0,42,704
chr10	78992656	.	TAC	T	1615.05	PASS	AB=0.797;AC=21;AF=0.500;AN=42;BaseQRankSum=4.609;DP=579;FS=27.028;HRun=0;HaplotypeScore=68.7453;InbreedingCoeff=0.2724;MQ=35.86;MQ0=119;MQRankSum=-2.032;QD=4.81;ReadPosRankSum=1.331;VQSLOD=0.6421;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,2:22:17.55:18,0,164	1/1:4,9:7:12.04:162,12,0	./.	./.	1/1:3,10:11:6.02:81,6,0	./.	./.	0/1:20,0:5:11.89:12,0,88	./.	1/1:6,25:24:20.44:591,20,0	1/1:3,21:18:9.03:122,9,0	./.	./.	0/1:5,0:1:0:0,0,0	0/1:20,15:18:49.81:107,0,50	0/1:19,55:55:27.62:147,0,28	0/0:41,0:31:57.19:0,57,972	0/0:7,0:6:9.03:0,9,158	1/1:4,4:3:9.03:120,9,0	0/1:8,9:11:48.67:65,0,49	1/1:26,12:12:6.02:81,6,0	0/0:33,0:20:27.04:0,27,383	0/0:20,0:13:15.01:0,15,255	0/0:65,0:59:80.39:0,80,1322	1/1:7,2:5:6.02:81,6,0	0/0:14,1:7:18.06:0,18,287	0/1:15,9:19:89.14:182,0,89	0/0:5,0:2:3.01:0,3,46
chr10	78992669	.	TCTGCTTACACACAC	T	306.16	PASS	AB=0.735;AC=3;AF=0.071;AN=42;BaseQRankSum=1.365;DP=586;FS=20.055;HRun=0;HaplotypeScore=98.1948;InbreedingCoeff=0.1351;MQ=33.06;MQ0=163;MQRankSum=-0.070;QD=8.27;ReadPosRankSum=-2.112;VQSLOD=0.3214;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:16,9:16:99:378,0,139	0/0:11,0:6:12.04:0,12,324	./.	./.	1/1:12,0:10:3.63:9,4,0	./.	./.	0/0:12,0:4:3.01:0,3,72	./.	0/0:32,0:20:48.11:0,48,1036	0/0:30,0:18:2.39:0,2,172	./.	./.	0/0:4,0:3:4.56:0,5,37	0/0:31,0:15:8.43:0,8,114	0/0:73,0:50:15.05:0,15,364	0/0:41,0:28:54.19:0,54,1588	0/0:10,0:9:12.04:0,12,217	0/0:10,0:2:6.02:0,6,149	0/0:16,0:11:3.93:0,4,101	0/0:43,0:13:3.01:0,3,82	0/0:22,0:13:15.05:0,15,471	0/0:18,0:11:12.04:0,12,302	0/0:68,0:54:68.03:0,68,1602	0/0:12,0:5:6.02:0,6,184	0/0:14,0:5:15.05:0,15,321	0/0:25,0:19:14.02:0,14,459	0/0:5,0:2:2.97:0,3,20
chr10	78992745	.	TAC	T	77.93	PASS	AB=0.882;AC=9;AF=0.180;AN=50;BaseQRankSum=4.571;DP=771;FS=0.902;HRun=0;HaplotypeScore=95.6620;InbreedingCoeff=0.1214;MQ=33.75;MQ0=209;MQRankSum=-3.314;QD=0.60;ReadPosRankSum=-3.764;VQSLOD=0.9723;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,2:8:29.53:30,0,172	0/0:8,0:4:2.99:0,3,53	./.	0/0:35,0:4:12.02:0,12,168	0/0:14,2:8:0.74:0,1,147	1/1:1,9:6:6.02:81,6,0	./.	0/0:44,0:7:21.07:0,21,368	1/1:5,12:6:3.01:41,3,0	0/1:27,2:13:6.87:7,0,429	0/1:21,1:12:13.42:13,0,380	0/0:7,0:5:15.05:0,15,263	0/1:11,8:13:14.15:14,0,388	0/1:7,1:7:19.45:19,0,294	0/0:66,2:41:35.51:0,36,1309	0/0:41,0:20:33.10:0,33,576	0/0:43,0:33:84.29:0,84,1458	0/0:8,0:7:6.02:0,6,105	./.	0/0:17,0:14:21.07:0,21,368	0/0:98,0:61:98.18:0,98,1785	0/0:37,0:35:81.28:0,81,1420	0/0:32,0:20:47.97:0,48,836	0/0:64,0:51:99:0,114,1968	0/0:32,0:19:4.47:0,4,656	0/0:17,0:6:18.06:0,18,299	0/0:24,1:15:21.07:0,21,356	0/0:6,0:4:3.01:0,3,52
chr10	78992834	.	TAC	T	417.52	PASS	AB=0.856;AC=11;AF=0.220;AN=50;BaseQRankSum=4.277;DP=625;FS=30.041;HRun=0;HaplotypeScore=107.0902;InbreedingCoeff=0.1808;MQ=42.46;MQ0=151;MQRankSum=-5.080;QD=2.11;ReadPosRankSum=-2.355;VQSLOD=0.2413;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,4:14:88.81:89,0,254	0/0:12,0:9:17.16:0,17,313	0/0:46,1:11:13.29:0,13,179	0/0:62,0:11:3.05:0,3,164	0/0:10,2:8:7.30:0,7,141	0/0:8,0:7:9.01:0,9,153	0/0:6,0:4:12.04:0,12,177	./.	0/0:21,0:16:24.08:0,24,399	1/1:3,3:2:6.02:81,6,0	1/1:0,1:1:3.01:41,3,0	./.	1/1:0,1:1:3.01:41,3,0	./.	0/1:40,4:28:22.37:22,0,705	0/1:13,5:11:99:137,0,106	0/0:44,0:44:96.09:0,96,1545	0/0:2,0:2:6.02:0,6,105	0/0:10,0:3:9.03:0,9,134	0/0:11,2:9:15.05:0,15,259	0/1:83,16:67:99:113,0,1252	0/0:46,0:36:78.27:0,78,1367	0/0:32,0:27:57.18:0,57,928	0/0:50,0:47:99:0,105,1822	0/0:16,1:11:21.05:0,21,308	0/1:6,1:3:31.51:32,0,95	0/0:17,3:12:30.10:0,30,486	0/0:7,0:2:3.01:0,3,53
chr10	78992859	.	C	CAT	64.89	PASS	AB=0.957;AC=8;AF=0.174;AN=46;BaseQRankSum=0.535;DP=602;FS=0.000;HRun=0;HaplotypeScore=102.0416;InbreedingCoeff=-0.0285;MQ=32.47;MQ0=205;MQRankSum=-0.634;QD=0.72;ReadPosRankSum=-1.161;VQSLOD=1.2012;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:20:35.79:0,36,422	0/1:9,0:7:38.25:38,0,84	./.	./.	0/0:10,0:6:12.04:0,12,168	0/0:2,0:2:3.01:0,3,36	0/1:8,0:4:0:0,0,0	./.	1/1:16,0:7:3.01:36,3,0	0/0:15,0:3:9.03:0,9,143	0/0:1,0:1:3.01:0,3,48	./.	0/0:1,0:1:3.01:0,3,47	./.	0/0:37,1:26:37.23:0,37,529	0/0:16,2:13:33.11:0,33,516	0/0:44,0:44:92.89:0,93,1328	0/1:10,1:11:36.49:36,0,256	0/0:15,0:3:6.02:0,6,97	0/0:9,0:3:3.01:0,3,49	0/0:87,2:58:0.10:0,0,1026	0/0:50,0:32:60.20:0,60,976	0/0:32,0:20:36.11:0,36,557	0/0:46,0:44:99:0,113,1721	0/1:14,0:7:13.97:14,0,86	0/1:16,1:7:39.38:39,0,269	0/1:13,2:7:14.97:15,0,77	0/0:10,0:2:3.01:0,3,47
chr10	78992887	.	TAC	T	788.99	PASS	AB=0.814;AC=8;AF=0.235;AN=34;BaseQRankSum=7.831;DP=465;FS=13.222;HRun=0;HaplotypeScore=79.9071;InbreedingCoeff=0.2477;MQ=35.18;MQ0=130;MQRankSum=-6.031;QD=5.89;ReadPosRankSum=-2.124;VQSLOD=0.9943;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,2:18:99:111,0,174	./.	./.	0/0:20,0:1:3.01:0,3,42	./.	0/0:3,0:3:2.04:0,2,6	0/0:14,0:9:18.14:0,18,357	./.	0/0:15,1:8:6.02:0,6,105	0/0:9,1:3:4.56:0,5,41	./.	./.	./.	./.	1/1:18,6:16:21.05:256,21,0	0/1:9,6:11:0.50:216,0,0	0/0:44,0:44:90.31:0,90,1566	0/0:19,0:19:54.18:0,54,929	0/1:6,1:3:34.41:34,0,46	./.	0/1:34,19:36:24.15:282,0,24	0/0:33,0:18:27.09:0,27,449	0/0:32,0:20:36.12:0,36,615	0/0:50,0:48:99:0,107,1795	1/1:8,0:2:1.25:3,1,0	0/0:28,0:15:45.07:0,45,731	./.	./.
chr10	78992906	.	TAC	T	244.47	PASS	AB=0.835;AC=8;AF=0.222;AN=36;BaseQRankSum=6.435;DP=390;FS=2.242;HRun=0;HaplotypeScore=70.7884;InbreedingCoeff=0.0912;MQ=36.39;MQ0=107;MQRankSum=-4.920;QD=3.06;ReadPosRankSum=-2.746;VQSLOD=0.9294;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,3:9:25.91:26,0,174	./.	0/0:21,0:1:3.01:0,3,37	0/0:25,0:1:3.01:0,3,53	./.	1/1:1,1:2:3.01:41,3,0	0/0:13,0:8:18.14:0,18,362	./.	0/0:15,1:8:6.02:0,6,105	1/1:3,1:1:3.01:41,3,0	./.	./.	./.	./.	0/1:7,3:7:54.46:54,0,109	0/1:9,1:7:27.30:27,0,170	0/0:47,0:47:99:0,102,1733	0/0:22,0:22:63.22:0,63,1104	0/0:7,0:3:8.99:0,9,125	./.	0/1:31,8:20:18.89:169,0,19	0/0:32,0:19:21.05:0,21,338	0/0:31,0:19:33.11:0,33,577	0/0:47,0:45:99:0,101,1685	./.	0/0:31,0:19:57.19:0,57,975	./.	0/0:6,0:1:3.01:0,3,44
chr10	78992959	.	TAC	T	413.84	PASS	AB=0.878;AC=7;AF=0.175;AN=40;BaseQRankSum=4.796;DP=470;FS=16.248;HRun=0;HaplotypeScore=70.4060;InbreedingCoeff=-0.0420;MQ=39.79;MQ0=137;MQRankSum=-4.949;QD=2.59;ReadPosRankSum=-0.253;VQSLOD=0.4489;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,2:28:6.50:6,0,677	0/0:1,0:1:3.01:0,3,35	./.	0/1:58,1:2:34.28:34,0,39	0/0:1,0:1:3.01:0,3,53	./.	0/0:8,0:6:2.98:0,3,53	./.	0/0:3,0:1:3.01:0,3,36	0/0:6,0:2:6.02:0,6,105	0/0:2,0:2:6.02:0,6,82	./.	./.	./.	0/1:11,6:11:99:176,0,151	0/1:6,3:8:81.92:182,0,82	0/0:38,0:38:99:0,102,1675	0/0:28,0:28:78.24:0,78,1302	1/1:2,4:3:6.02:81,6,0	0/0:2,0:1:3.01:0,3,52	0/1:34,1:22:48.23:48,0,265	0/0:38,0:30:39.13:0,39,677	0/0:28,0:23:38.91:0,39,620	0/0:47,0:45:99:0,117,2023	./.	0/0:32,1:30:43.73:0,44,1341	./.	0/0:14,0:13:30.08:0,30,496
chr10	78993101	.	T	TAC	200.39	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=0.491;DP=662;FS=1.395;HRun=0;HaplotypeScore=86.8797;InbreedingCoeff=0.6222;MQ=36.37;MQ0=168;MQRankSum=-0.297;QD=11.79;ReadPosRankSum=-3.963;VQSLOD=2.5460;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:11:12.04:0,12,151	0/0:2,0:2:2.97:0,3,20	./.	./.	0/0:12,0:6:12.04:0,12,157	0/0:1,0:1:3.01:0,3,41	1/1:6,0:5:3.01:46,3,0	0/0:34,0:6:18.06:0,18,240	1/1:4,7:10:15.05:258,15,0	0/0:21,0:16:45.15:0,45,607	0/0:16,0:11:17.84:0,18,195	0/0:5,0:5:15.05:0,15,205	0/0:3,0:3:9.01:0,9,99	0/0:4,0:4:6.02:0,6,77	0/0:37,0:16:39.13:0,39,518	0/0:24,0:16:39.13:0,39,518	0/0:34,0:33:80:0,80,1072	0/0:30,0:30:87.29:0,87,1167	0/0:11,0:4:12.04:0,12,162	0/0:12,0:11:24.01:0,24,301	0/0:70,0:45:71.49:0,71,924	0/0:45,0:40:73.30:0,73,994	0/0:34,0:28:37.79:0,38,571	0/0:67,0:64:99:0,174,2273	0/0:21,0:14:21.03:0,21,261	0/0:35,0:25:63.18:0,63,810	0/0:9,0:5:9.03:0,9,122	0/0:14,0:11:30.10:0,30,405
chr10	78993118	.	TAC	T	729.23	PASS	AB=0.883;AC=15;AF=0.288;AN=52;BaseQRankSum=6.773;DP=687;FS=35.214;HRun=0;HaplotypeScore=84.5026;InbreedingCoeff=0.2517;MQ=37.66;MQ0=169;MQRankSum=-6.791;QD=3.31;ReadPosRankSum=0.881;VQSLOD=0.4948;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,7:11:52.09:104,0,52	0/0:2,0:2:6.02:0,6,101	./.	./.	0/1:10,1:6:28.47:28,0,116	0/0:3,0:3:6.01:0,6,75	0/0:19,0:17:36.12:0,36,628	0/0:39,0:6:18.06:0,18,300	0/0:22,1:18:1.71:0,2,639	0/0:21,1:16:44.97:0,45,612	0/1:15,2:11:65.82:66,0,107	1/1:0,5:5:15.05:201,15,0	1/1:0,3:3:9.03:121,9,0	1/1:0,4:4:6.02:81,6,0	0/1:32,3:16:47.97:48,0,318	0/1:22,1:16:4.42:4,0,337	0/0:39,0:38:99:0,99,1702	0/0:28,0:28:81.28:0,81,1379	0/0:13,0:4:12.04:0,12,176	0/0:10,2:11:15.05:0,15,192	0/1:68,6:45:11.20:11,0,698	0/0:46,0:40:77.97:0,78,1276	0/0:27,0:20:41.72:0,42,706	0/0:75,0:72:99:0,187,3128	0/1:16,4:14:99:105,0,142	0/0:32,0:20:45.15:0,45,788	1/1:5,4:5:9.03:122,9,0	0/0:16,0:12:33.11:0,33,575
chr10	78993185	.	TAC	T	288.97	PASS	AB=0.846;AC=7;AF=0.140;AN=50;BaseQRankSum=4.673;DP=529;FS=2.536;HRun=0;HaplotypeScore=90.3386;InbreedingCoeff=0.2172;MQ=60.20;MQ0=73;MQRankSum=-5.076;QD=4.59;ReadPosRankSum=-4.168;VQSLOD=1.4467;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:7,3:8:3.01:33,3,0	0/0:2,1:3:6.01:0,6,75	0/0:14,0:12:26.97:0,27,373	0/0:28,0:18:33.17:0,33,642	0/0:6,4:7:2.80:0,3,13	0/0:17,1:11:33.11:0,33,570	0/0:48,0:30:63.17:0,63,1021	./.	0/0:52,1:43:87.25:0,87,1474	0/1:14,5:15:99:245,0,149	0/0:9,2:8:4.98:0,5,12	./.	1/1:1,2:3:6.02:76,6,0	./.	0/1:14,4:11:19.16:29,0,19	0/1:12,1:9:25.16:25,0,123	0/0:39,0:35:81.27:0,81,1377	0/0:30,1:27:28.79:0,29,1068	0/0:3,0:1:3.01:0,3,39	0/0:8,3:10:2.01:0,2,53	0/0:12,2:5:2.73:0,3,12	0/0:27,0:23:42.13:0,42,708	0/0:24,0:20:45.14:0,45,756	0/0:77,0:71:99:0,156,2530	0/0:8,0:8:6.75:0,7,36	0/0:28,0:21:63.19:0,63,1074	0/0:6,0:3:6.02:0,6,90	0/0:11,0:7:15.05:0,15,263
chr10	78993204	.	TAC	T	2079.85	PASS	AB=0.679;AC=21;AF=0.420;AN=50;BaseQRankSum=10.242;DP=614;FS=9.556;HRun=0;HaplotypeScore=78.2615;InbreedingCoeff=0.3441;MQ=40.46;MQ0=154;MQRankSum=-10.609;QD=10.25;ReadPosRankSum=-5.662;VQSLOD=0.7586;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,10:12:16.04:168,16,0	1/1:4,4:8:9.03:117,9,0	0/0:21,0:2:0:0,0,0	0/0:27,0:6:8.98:0,9,77	1/1:8,7:10:9.87:97,10,0	0/1:19,2:10:19.46:19,0,284	0/0:45,0:19:27.05:0,27,439	./.	0/0:45,1:32:63.18:0,63,1038	0/1:11,13:19:99:475,0,111	1/1:5,11:10:22.19:213,22,0	./.	0/1:1,2:3:29.74:34,0,30	./.	0/1:12,13:14:43.16:166,0,43	0/1:5,15:11:34.38:174,0,34	0/0:42,0:30:69.21:0,69,1142	0/0:33,0:23:25.37:0,25,710	1/1:1,2:1:3.01:41,3,0	1/1:10,7:15:27:314,27,0	0/1:12,6:6:18.35:161,0,18	0/0:32,0:21:26.98:0,27,435	0/0:24,0:18:30.10:0,30,521	0/0:74,0:62:99:0,101,1706	1/1:2,9:11:17.54:204,18,0	0/0:42,0:22:51.17:0,51,862	0/1:3,5:4:41.30:72,0,41	0/0:9,0:5:15.05:0,15,239
chr10	78993257	.	TAC	T	1119.80	PASS	AB=0.924;AC=25;AF=0.625;AN=40;BaseQRankSum=5.991;DP=639;FS=3.428;HRun=0;HaplotypeScore=58.5677;InbreedingCoeff=0.2593;MQ=17.49;MQ0=233;MQRankSum=2.425;QD=3.24;ReadPosRankSum=-3.572;VQSLOD=0.8695;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,4:14:7.05:168,7,0	0/0:12,1:11:2.47:0,2,61	./.	./.	1/1:15,6:10:4.56:39,5,0	./.	0/0:51,0:6:2.68:0,3,31	0/1:22,0:2:0:0,0,0	./.	0/1:24,4:17:15.59:16,0,253	0/1:21,3:15:12.56:194,0,13	1/1:0,2:2:3.01:40,3,0	1/1:3,4:7:9.03:119,9,0	./.	1/1:21,7:12:18.69:197,19,0	0/1:20,4:9:30.89:38,0,31	0/1:40,0:10:13.59:14,0,46	0/0:36,0:16:5.98:0,6,73	0/0:10,0:2:3.01:0,3,44	1/1:20,4:15:8.51:85,9,0	1/1:14,0:6:13.26:123,13,0	./.	./.	1/1:60,0:28:1.25:3,1,0	1/1:12,6:11:16.43:167,16,0	0/0:38,0:10:18.04:0,18,280	1/1:12,4:7:5.99:51,6,0	./.
chr10	78993276	.	TAC	T	323.51	PASS	AB=0.857;AC=20;AF=0.556;AN=36;BaseQRankSum=4.440;DP=539;FS=0.000;HRun=0;HaplotypeScore=25.9281;InbreedingCoeff=0.3048;MQ=15.55;MQ0=247;MQRankSum=-1.595;QD=2.25;ReadPosRankSum=-0.763;VQSLOD=1.0832;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:5:5.70:43,6,0	1/1:5,1:4:3.01:41,3,0	./.	./.	1/1:7,7:6:1.25:3,1,0	./.	0/0:51,0:6:2.69:0,3,52	./.	0/0:40,1:14:0:0,0,0	1/1:6,6:3:9.03:122,9,0	0/1:9,6:8:23.29:36,0,23	1/1:1,0:1:1.25:3,1,0	1/1:2,2:4:6.02:81,6,0	./.	1/1:9,5:5:4.49:39,4,0	1/1:9,6:1:3.01:33,3,0	0/1:44,0:16:32.02:32,0,46	0/0:31,0:10:2.98:0,3,52	./.	./.	./.	0/0:35,0:17:9.03:0,9,158	0/0:25,0:10:6.02:0,6,105	0/0:60,0:23:1.25:0,1,50	./.	0/0:40,0:8:15.04:0,15,235	1/1:2,7:4:2.60:10,3,0	./.
chr10	78993301	.	CAT	C	52.85	PASS	AB=0.976;AC=12;AF=0.300;AN=40;BaseQRankSum=4.563;DP=655;FS=0.000;HRun=0;HaplotypeScore=31.5861;InbreedingCoeff=0.4077;MQ=21.16;MQ0=263;MQRankSum=-2.746;QD=0.72;ReadPosRankSum=-3.688;VQSLOD=0.2886;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,1:2:3.01:0,3,30	1/1:8,0:6:2.88:15,3,0	./.	./.	1/1:16,0:6:1.14:3,1,0	0/0:32,0:15:15.05:0,15,304	0/0:62,0:14:0:0,0,0	./.	0/0:54,0:30:12.04:0,12,244	0/1:10,0:4:3.96:4,0,62	1/1:8,0:4:1.82:5,2,0	1/1:1,3:3:1.25:3,1,0	1/1:2,5:4:9.03:124,9,0	./.	0/1:19,1:2:0:0,0,0	0/0:22,1:5:3.01:0,3,31	0/0:45,0:24:2.86:0,3,60	0/0:27,0:9:3:0,3,61	./.	0/0:14,1:6:3:0,3,29	./.	0/0:38,0:23:30.10:0,30,599	0/0:24,0:12:12.04:0,12,221	0/0:55,0:26:7.22:0,7,179	./.	0/0:36,0:14:39.13:0,39,787	./.	0/0:16,0:10:6.02:0,6,122
chr10	78993331	.	TAC	T	391.04	PASS	AB=0.885;AC=17;AF=0.370;AN=46;BaseQRankSum=3.359;DP=741;FS=5.582;HRun=0;HaplotypeScore=64.8657;InbreedingCoeff=0.3174;MQ=22.70;MQ0=216;MQRankSum=-2.423;QD=1.67;ReadPosRankSum=-1.875;VQSLOD=0.6666;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,4:10:12.25:73,0,12	1/1:7,1:7:2.37:8,2,0	./.	./.	1/1:24,5:17:1.56:38,2,0	0/0:34,0:18:17.94:0,18,312	./.	./.	0/0:53,0:31:18.06:0,18,315	0/0:23,3:15:2.50:0,3,382	0/1:15,0:11:17.57:30,0,18	0/1:7,6:5:16.95:72,0,17	1/1:15,9:8:12.04:162,12,0	1/1:11,12:4:4.18:38,4,0	0/0:27,5:12:19.18:0,19,227	0/0:34,2:16:6.57:0,7,238	0/1:43,0:20:0:0,0,0	./.	0/0:5,0:2:3.01:0,3,52	0/1:23,3:19:36.40:36,0,109	1/1:16,2:9:5.93:40,6,0	0/0:36,0:26:30.10:0,30,526	0/0:28,0:16:21.07:0,21,364	0/0:55,0:27:9.02:0,9,158	1/1:8,5:6:1.16:37,1,0	0/0:34,0:16:45.15:0,45,781	0/0:11,3:9:17.07:0,17,239	0/0:10,0:7:6.02:0,6,105
chr10	78993350	.	TAC	T	2538.09	PASS	AB=0.737;AC=24;AF=0.500;AN=48;BaseQRankSum=7.758;DP=770;FS=8.751;HRun=0;HaplotypeScore=60.0265;InbreedingCoeff=0.2894;MQ=22.87;MQ0=215;MQRankSum=-4.935;QD=6.86;ReadPosRankSum=0.231;VQSLOD=1.9639;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:10,16:13:18.84:229,0,19	1/1:4,4:7:5.98:61,6,0	./.	./.	1/1:11,15:15:9.30:98,9,0	0/0:36,0:19:17.93:0,18,315	./.	0/0:12,0:1:3.01:0,3,52	0/0:59,0:35:18.06:0,18,316	0/1:15,14:19:99:470,0,215	1/1:5,12:13:17.89:158,18,0	1/1:3,11:6:12.04:159,12,0	1/1:6,18:8:12.04:161,12,0	1/1:9,15:5:11.52:127,12,0	1/1:13,21:14:24.04:301,24,0	0/1:11,21:16:44.04:288,0,44	0/1:42,0:23:0:0,0,0	./.	0/1:7,3:3:31.47:31,0,96	0/1:16,16:21:25.33:287,0,25	0/1:19,5:13:65.33:65,0,86	0/0:37,0:26:30.10:0,30,513	0/0:26,0:19:21.07:0,21,367	0/0:53,0:24:9.03:0,9,158	0/1:9,5:6:24.82:31,0,25	0/0:36,0:19:45.15:0,45,789	1/1:4,10:9:18.06:243,18,0	0/0:8,0:6:6.02:0,6,105
chr10	78993403	.	TAC	T	681.77	PASS	AB=0.856;AC=17;AF=0.447;AN=38;BaseQRankSum=5.467;DP=683;FS=4.905;HRun=0;HaplotypeScore=43.5591;InbreedingCoeff=0.0604;MQ=17.03;MQ0=224;MQRankSum=-0.035;QD=2.50;ReadPosRankSum=-4.731;VQSLOD=-0.2311;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,8:8:17.93:178,18,0	./.	./.	./.	1/1:11,7:10:5.05:56,5,0	./.	0/0:54,0:11:0:0,0,0	0/0:22,0:14:17.84:0,18,252	./.	0/1:18,3:13:55.57:56,0,61	0/1:16,1:12:29.37:48,0,29	0/0:9,7:4:3.01:0,3,38	0/0:17,7:6:3.01:0,3,35	0/1:18,4:4:27.73:69,0,28	0/1:20,8:13:25.45:25,0,98	0/1:16,6:9:27.78:66,0,28	./.	0/0:28,0:7:3.01:0,3,53	0/0:16,0:1:3.01:0,3,37	1/1:16,4:12:12.03:132,12,0	1/1:8,5:8:4.57:81,5,0	./.	./.	0/1:72,0:20:0:0,0,0	1/1:13,2:5:3:37,3,0	0/0:39,0:13:33.11:0,33,540	0/1:9,4:9:59.87:60,0,86	./.
chr10	78993441	.	TAC	T	99.04	PASS	AB=0.833;AC=11;AF=0.324;AN=34;BaseQRankSum=3.925;DP=572;FS=2.390;HRun=0;HaplotypeScore=13.0081;InbreedingCoeff=0.4278;MQ=21.75;MQ0=247;MQRankSum=-2.796;QD=2.75;ReadPosRankSum=1.016;VQSLOD=0.4539;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	0/0:30,0:12:9.03:0,9,159	0/0:61,0:15:3.01:0,3,47	0/1:4,1:2:14.07:35,0,14	0/0:52,0:31:18.06:0,18,314	0/0:6,1:2:3.01:0,3,53	./.	1/1:0,6:1:3.01:41,3,0	./.	1/1:0,3:1:3.01:41,3,0	1/1:6,6:2:2.88:15,3,0	./.	0/0:27,0:12:15.05:0,15,266	0/0:27,0:9:5.96:0,6,106	./.	1/1:4,3:3:3.01:41,3,0	./.	0/0:28,0:19:12.04:0,12,213	0/0:25,0:14:3.01:0,3,53	0/0:80,0:39:30.10:0,30,532	./.	0/0:46,0:20:51.17:0,51,894	1/1:0,3:2:3.01:41,3,0	0/0:11,0:9:6.02:0,6,106
chr10	78993460	.	T	TAC	482.98	PASS	AB=0.921;AC=10;AF=0.217;AN=46;BaseQRankSum=5.157;DP=583;FS=9.188;HRun=0;HaplotypeScore=38.8570;InbreedingCoeff=0.2587;MQ=27.27;MQ0=200;MQRankSum=-4.278;QD=7.00;ReadPosRankSum=-4.944;VQSLOD=-0.0079;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/1:12,1:6:5.46:43,0,5	0/0:28,0:14:12.04:0,12,162	0/0:59,0:23:15.01:0,15,182	0/0:9,0:3:9.03:0,9,122	0/0:45,0:30:24.08:0,24,324	0/0:12,0:6:9.03:0,9,121	1/1:5,0:4:3.01:49,3,0	0/0:6,0:2:3.01:0,3,40	./.	0/0:3,0:1:3.01:0,3,39	1/1:14,0:4:2.13:48,2,0	1/1:10,2:3:6.02:103,6,0	0/0:28,0:16:30.10:0,30,406	0/0:30,0:13:15.05:0,15,202	0/0:10,1:3:9.03:0,9,121	0/1:11,2:8:25.44:186,0,25	0/0:10,0:4:5.98:0,6,60	0/0:31,0:23:18.06:0,18,244	0/0:31,0:22:20.90:0,21,251	0/0:74,0:41:39.13:0,39,528	0/1:7,1:5:27.81:138,0,28	0/0:40,0:19:51.17:0,51,690	0/1:4,0:3:34.47:46,0,34	0/0:14,0:12:12.04:0,12,162
chr10	78993477	.	TAC	T	1319.23	PASS	AB=0.710;AC=22;AF=0.407;AN=54;BaseQRankSum=10.471;DP=534;FS=49.278;HRun=0;HaplotypeScore=54.6542;InbreedingCoeff=0.5932;MQ=40.59;MQ0=116;MQRankSum=-9.546;QD=11.67;ReadPosRankSum=-5.265;VQSLOD=0.9300;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:1:2.97:20,3,0	./.	0/0:20,1:5:14.98:0,15,214	0/0:26,0:4:9.01:0,9,111	0/1:7,4:7:26.80:31,0,27	0/0:29,0:17:24.08:0,24,420	0/0:47,0:24:24.08:0,24,413	0/0:10,0:3:8.90:0,9,112	0/0:44,0:34:41.75:0,42,731	0/1:13,7:11:76.79:254,0,77	1/1:2,5:6:14.84:101,15,0	1/1:1,5:5:14.92:141,15,0	1/1:0,4:3:8.99:101,9,0	1/1:1,2:2:5.98:60,6,0	1/1:4,11:8:20.82:156,21,0	1/1:4,6:4:12:142,12,0	0/0:25,0:18:45.15:0,45,782	0/0:31,0:21:39.12:0,39,683	0/0:11,1:5:9.03:0,9,144	1/1:4,8:9:20.98:235,21,0	0/1:6,3:5:27.62:51,0,28	0/0:26,0:21:30.10:0,30,526	0/0:29,0:23:39.13:0,39,679	0/0:74,0:54:84.29:0,84,1471	0/1:3,5:7:16.87:102,0,17	0/0:35,0:20:57.20:0,57,999	1/1:1,3:4:9.03:122,9,0	0/0:11,0:9:18.06:0,18,316
chr10	78993496	.	TAC	T	4663.24	PASS	AB=0.700;AC=31;AF=0.554;AN=56;BaseQRankSum=12.293;DP=608;FS=31.580;HRun=0;HaplotypeScore=76.7439;InbreedingCoeff=0.8244;MQ=58.65;MQ0=51;MQRankSum=-9.772;QD=21.79;ReadPosRankSum=-4.967;VQSLOD=2.5050;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:11:20.81:160,21,0	1/1:0,3:2:6.02:81,6,0	0/0:30,1:16:4.63:0,5,667	0/0:27,1:12:0.86:0,1,321	1/1:1,13:11:20.98:239,21,0	0/0:32,0:25:39.13:0,39,683	0/0:41,0:29:45.15:0,45,787	0/1:8,6:8:31.18:207,0,31	0/0:40,0:36:66.23:0,66,1154	1/1:2,30:26:78.19:974,78,0	1/1:1,9:9:21.03:263,21,0	1/1:0,13:11:26.97:301,27,0	1/1:0,13:10:24:276,24,0	1/1:1,7:5:11.78:109,12,0	1/1:5,14:13:36.08:460,36,0	1/1:2,13:5:12.04:162,12,0	0/0:23,0:19:51.17:0,51,894	0/0:28,0:22:45.15:0,45,767	1/1:2,3:3:3.01:41,3,0	1/1:2,10:10:27.09:364,27,0	1/1:2,18:16:30.06:380,30,0	0/0:25,0:22:39.13:0,39,684	0/0:27,0:25:54.18:0,54,946	0/0:71,0:62:99:0,126,2200	1/1:0,15:14:33.11:446,33,0	0/0:35,1:26:75.26:0,75,1308	1/1:1,6:6:14.90:202,15,0	0/0:11,0:10:24.08:0,24,413
chr10	78994038	.	CT	C	7352.80	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=12.976;DP=609;FS=15.166;HRun=6;HaplotypeScore=62.3742;InbreedingCoeff=0.9956;MQ=87.24;MQ0=0;MQRankSum=-6.201;QD=27.33;ReadPosRankSum=0.174;VQSLOD=3.6447;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.21:0,81,1018	1/1:3,16:19:42.10:451,42,0	0/0:26,0:26:73.64:0,74,833	0/0:21,1:22:55.33:0,55,617	1/1:2,23:25:69.17:741,69,0	0/0:23,0:23:63.19:0,63,803	0/0:15,0:15:42.13:0,42,538	1/1:3,30:33:87.15:902,87,0	0/0:21,0:21:51.14:0,51,642	1/1:2,22:24:63.13:667,63,0	1/1:0,19:19:57.10:600,57,0	0/0:25,0:25:72.21:0,72,919	0/0:22,0:22:60.20:0,60,789	0/0:24,0:24:66.21:0,66,866	1/1:1,16:17:42.11:451,42,0	1/1:2,16:18:48.12:516,48,0	0/0:21,0:21:63.18:0,63,800	0/0:23,0:23:63.20:0,63,829	1/1:4,16:20:48.10:508,48,0	1/1:1,24:25:66.02:679,66,0	1/1:2,20:22:54.14:580,54,0	0/0:22,0:22:60.18:0,60,774	0/0:27,0:27:78.24:0,78,1010	0/0:16,0:16:42.14:0,42,553	1/1:2,22:24:57.14:612,57,0	0/0:21,1:22:30.96:0,31,757	1/1:1,22:23:60.15:645,60,0	0/0:4,0:4:12.04:0,12,158
chr10	78994302	.	TTGTG	T	1502.26	PASS	AB=0.933;AC=23;AF=0.442;AN=52;BaseQRankSum=3.964;DP=541;FS=0.000;HRun=0;HaplotypeScore=111.4295;InbreedingCoeff=0.7463;MQ=67.33;MQ0=14;MQRankSum=-0.374;QD=6.59;ReadPosRankSum=1.695;VQSLOD=1.8929;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:33:30.10:0,30,498	1/1:5,0:5:3:25,3,0	./.	0/0:22,0:18:9.03:0,9,111	1/1:9,0:18:5.88:43,6,0	0/0:14,0:16:14.78:0,15,231	0/0:12,0:13:10.83:0,11,173	1/1:24,0:24:6.01:64,6,0	0/0:14,0:16:20.81:0,21,374	1/1:7,8:15:20.21:274,20,0	1/1:6,3:9:3.01:47,3,0	0/0:18,0:20:15.83:0,16,241	0/0:15,0:17:21.07:0,21,292	0/0:17,0:18:11.90:0,12,172	1/1:8,7:15:11.92:188,12,0	1/1:8,7:16:26.44:343,26,0	0/0:33,0:33:48.16:0,48,998	0/0:29,0:29:35.86:0,36,724	1/1:13,2:15:6.02:86,6,0	./.	1/1:35,17:49:23.37:339,23,0	0/0:14,0:14:20.68:0,21,306	0/0:12,0:12:18.06:0,18,324	0/1:26,0:26:13.26:13,0,459	1/1:9,7:17:14.25:176,14,0	0/0:17,0:24:45.62:0,46,777	1/1:7,5:12:5.98:94,6,0	0/0:4,0:3:3.01:0,3,67
chr10	78995413	.	GA	G	1642	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.991;DP=634;FS=1.855;HRun=3;HaplotypeScore=60.8677;InbreedingCoeff=0.9632;MQ=84.65;MQ0=0;MQRankSum=-1.567;QD=32.20;ReadPosRankSum=2.656;VQSLOD=3.9926;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.31:0,93,1339	0/0:2,0:2:6.02:0,6,86	0/0:19,0:19:50.19:0,50,717	0/0:23,0:23:63.14:0,63,803	0/0:37,0:37:99:0,111,1561	0/0:24,0:24:63.19:0,63,888	0/0:24,0:24:69.23:0,69,993	0/0:39,0:39:99:0,111,1567	0/0:27,0:27:81.26:0,81,1149	0/0:24,0:24:72.24:0,72,1023	0/0:23,0:23:69.22:0,69,977	1/1:1,14:15:39.12:483,39,0	1/1:0,19:19:53.87:669,54,0	1/1:0,17:17:51.16:632,51,0	0/0:32,0:32:90.30:0,90,1296	0/0:22,0:22:66.22:0,66,934	0/0:28,0:28:81.24:0,81,1128	0/0:19,0:19:54.18:0,54,773	0/0:16,0:16:48.16:0,48,691	0/0:29,0:29:87.28:0,87,1236	0/0:10,0:10:27.08:0,27,370	0/0:23,0:23:69.22:0,69,976	0/0:25,0:25:75.24:0,75,1061	0/0:19,0:19:51.15:0,51,715	0/0:21,0:21:63.21:0,63,907	0/0:25,0:25:75.25:0,75,1065	0/0:30,0:30:90.28:0,90,1256	0/0:10,0:10:30.10:0,30,432
chr10	78995858	.	C	CTGTTTT	8861.74	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-2.218;DP=458;FS=0.000;HRun=0;HaplotypeScore=124.5618;InbreedingCoeff=0.9603;MQ=66.07;MQ0=0;MQRankSum=-8.540;QD=52.44;ReadPosRankSum=0.024;VQSLOD=4.9135;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,13:22:22.37:385,22,0	0/0:7,0:7:12.03:0,12,198	0/0:14,0:12:5.89:0,6,88	0/0:20,0:15:12.04:0,12,194	0/0:18,0:18:33.10:0,33,609	1/1:19,7:26:57.18:1531,57,0	1/1:12,2:14:24.06:537,24,0	0/0:23,0:23:33.06:0,33,538	1/1:8,4:12:30.10:837,30,0	0/0:24,0:24:48.16:0,48,945	0/0:15,0:15:36.12:0,36,742	1/1:12,13:25:51.14:1487,51,0	1/1:9,6:16:39.13:1084,39,0	1/1:9,6:15:39.13:1095,39,0	0/0:15,0:15:33.11:0,33,666	0/0:15,0:15:24.08:0,24,476	0/0:17,0:16:36.12:0,36,723	1/1:4,9:13:9.02:292,9,0	0/0:17,0:17:30.01:0,30,453	0/0:19,0:19:30.10:0,30,591	0/0:10,0:10:18.06:0,18,357	0/0:13,0:13:24.07:0,24,445	0/0:17,0:17:36.09:0,36,635	0/0:16,0:16:36.11:0,36,700	0/0:19,0:19:30.09:0,30,584	1/1:16,5:21:48.15:1266,48,0	0/0:10,0:10:21.07:0,21,429	1/1:4,1:5:14.97:348,15,0
chr10	78995891	.	GT	G	431.94	PASS	AB=0.910;AC=15;AF=0.268;AN=56;BaseQRankSum=0.633;DP=546;FS=1.049;HRun=15;HaplotypeScore=106.8700;InbreedingCoeff=0.1610;MQ=59.08;MQ0=10;MQRankSum=-0.431;QD=2.05;ReadPosRankSum=2.214;VQSLOD=-0.0117;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:25:30.90:0,31,174	0/0:6,0:6:12.45:0,12,100	0/0:25,0:9:7.42:0,7,105	0/0:28,0:14:9.21:0,9,34	0/0:19,2:21:3.12:0,3,244	1/1:10,13:24:28.93:240,29,0	1/1:5,10:16:21.63:127,22,0	0/1:26,3:29:10.54:11,0,271	1/1:9,7:16:1.09:121,1,0	0/1:18,2:20:5.56:6,0,88	0/0:27,1:29:22.14:0,22,320	0/0:20,0:20:50.42:0,50,245	0/0:18,0:18:27:0,27,119	0/0:20,0:20:36.47:0,36,168	0/0:20,1:22:17.98:0,18,333	0/0:17,1:21:31.20:0,31,355	0/0:28,1:28:42.72:0,43,505	0/1:14,2:16:5.17:5,0,220	0/1:7,1:8:14.20:14,0,42	0/1:20,3:23:41.85:42,0,228	0/1:8,0:8:7.33:7,0,58	0/1:9,0:9:1.40:1,0,99	0/1:17,2:18:2.54:3,0,222	0/1:18,1:20:8.03:8,0,211	0/0:18,0:21:41.74:0,42,341	0/0:14,0:25:31.74:0,32,233	0/0:15,1:18:11.55:0,12,194	0/0:3,0:6:5.68:0,6,28
chr10	78995895	.	T	TTG	1475.28	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.573;DP=543;FS=9.609;HRun=0;HaplotypeScore=109.8355;InbreedingCoeff=0.8321;MQ=59.25;MQ0=10;MQRankSum=-7.091;QD=25.88;ReadPosRankSum=1.835;VQSLOD=4.3552;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:20.12:0,20,219	0/0:6,0:6:18.03:0,18,214	0/0:24,0:8:8.77:0,9,133	0/0:28,0:13:0.67:0,1,95	0/0:21,0:21:55.63:0,56,613	0/0:26,0:26:51.12:0,51,470	0/0:17,0:17:22.74:0,23,259	0/0:31,0:31:67.32:0,67,835	0/0:15,0:15:5.94:0,6,207	0/0:19,0:18:49.54:0,50,498	0/0:28,0:28:79.36:0,79,837	1/1:8,14:22:45.59:634,46,0	1/1:4,12:17:30.76:410,31,0	1/1:6,11:18:43.21:573,43,0	0/0:22,0:22:57.75:0,58,688	0/0:20,0:20:56.76:0,57,691	0/0:30,0:29:81.06:0,81,1010	0/0:18,0:17:50.36:0,50,584	0/0:7,0:7:20.97:0,21,214	0/0:25,0:24:69.96:0,70,768	0/0:7,0:7:18.50:0,18,200	0/0:8,0:8:20.93:0,21,232	0/0:19,0:18:51.04:0,51,597	0/0:21,0:21:43.53:0,44,609	0/0:23,0:23:62.99:0,63,743	0/0:23,0:23:7.87:0,8,204	0/0:17,0:17:50.90:0,51,535	0/0:6,0:6:12.92:0,13,64
chr10	78997682	.	CAA	C	1833.67	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=11.060;DP=626;FS=0.499;HRun=10;HaplotypeScore=78.4723;InbreedingCoeff=0.8893;MQ=66.00;MQ0=0;MQRankSum=0.031;QD=24.45;ReadPosRankSum=-1.263;VQSLOD=3.2043;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:37:80.35:0,80,290	0/0:9,0:10:27.09:0,27,410	0/0:2,0:4:5.75:0,6,53	0/1:5,0:5:1.30:6,0,1	0/0:33,0:33:86.78:0,87,1339	1/1:3,29:32:81.21:903,81,0	1/1:3,14:17:42.10:468,42,0	0/0:26,0:26:60.20:0,60,951	1/1:2,19:21:54.14:602,54,0	0/0:27,0:27:74.74:0,75,1152	0/0:21,0:22:62.69:0,63,930	0/0:17,0:18:54.17:0,54,816	0/0:17,0:17:42.14:0,42,667	0/0:15,0:15:42.13:0,42,646	0/0:24,0:24:66.23:0,66,1046	0/0:18,0:19:50.66:0,51,771	0/0:11,0:11:27.09:0,27,429	0/0:17,0:18:45.11:0,45,678	0/0:19,0:20:54.12:0,54,788	0/0:36,0:37:99:0,102,1557	0/0:15,0:15:42.14:0,42,665	0/0:17,0:19:53.14:0,53,757	0/0:32,0:35:99:0,102,1496	0/0:23,0:23:66.22:0,66,1043	0/0:29,0:29:84.26:0,84,1289	0/0:35,0:37:96.29:0,96,1461	0/0:39,0:41:99:0,102,1574	0/0:12,0:14:41.62:0,42,606
chr10	78999542	.	C	CT	849.03	PASS	AB=0.973;AC=7;AF=0.125;AN=56;BaseQRankSum=-5.573;DP=616;FS=1.206;HRun=11;HaplotypeScore=67.8313;InbreedingCoeff=0.8275;MQ=71.53;MQ0=2;MQRankSum=-1.348;QD=9.43;ReadPosRankSum=-0.875;VQSLOD=2.5325;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:32:52.95:0,53,153	0/0:10,0:10:23.87:0,24,184	0/0:27,0:24:35.77:0,36,251	0/0:13,0:12:12.53:0,13,54	0/0:20,0:20:44.72:0,45,339	1/1:4,14:20:18.51:340,19,0	1/1:0,13:15:35.07:374,35,0	0/0:37,1:38:37.42:0,37,478	1/1:4,14:19:27.05:274,27,0	0/0:23,0:25:57.81:0,58,430	0/0:15,0:15:32.82:0,33,254	0/0:19,0:20:46.68:0,47,343	0/0:21,0:24:60.74:0,61,445	0/0:24,1:27:8.77:0,9,372	0/0:29,0:28:80.67:0,81,625	0/0:11,0:11:23.90:0,24,186	0/0:25,1:26:32.30:0,32,434	0/0:18,0:19:52.80:0,53,395	0/1:32,1:36:5.38:5,0,301	0/0:23,0:23:53.75:0,54,416	0/0:18,0:20:30.94:0,31,221	0/0:12,0:12:26.87:0,27,209	0/0:16,0:16:35.84:0,36,279	0/0:26,0:27:67.73:0,68,512	0/0:23,1:24:27.49:0,27,388	0/0:26,1:28:21.35:0,21,329	0/0:21,1:22:20.29:0,20,337	0/0:13,1:14:11.40:0,11,271
chr10	78999842	.	C	CTATGAACTTCCAAGTCTAAATGTTATTAAG	12960.25	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.313;DP=689;FS=16.423;HRun=0;HaplotypeScore=491.9447;InbreedingCoeff=0.9998;MQ=80.84;MQ0=0;MQRankSum=-10.719;QD=254.12;ReadPosRankSum=1.328;VQSLOD=4.1463;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:44,4:51:99:12960,126,0	0/0:16,0:16:48.16:0,48,3356	0/0:20,0:20:51.14:0,51,1959	0/0:17,0:17:41.60:0,42,1903	0/0:28,0:28:84.27:0,84,5731	0/0:20,0:20:60.16:0,60,3945	0/0:24,0:24:69.24:0,69,4464	0/0:28,0:28:81.28:0,81,4705	0/0:22,0:22:66.23:0,66,4662	0/0:40,0:40:99:0,111,7299	0/0:13,0:13:39.13:0,39,2492	0/0:17,0:17:48.15:0,48,3407	0/0:26,0:26:78.27:0,78,5320	0/0:25,0:25:72.23:0,72,4868	0/0:35,0:34:99:0,102,6431	0/0:29,0:29:87.28:0,87,5753	0/0:21,0:21:63.22:0,63,4146	0/0:18,0:18:54.19:0,54,3414	0/0:17,0:17:51.18:0,51,2822	0/0:33,0:33:99:0,99,6829	0/0:24,0:24:69.24:0,69,4957	0/0:16,0:16:42.13:0,42,2633	0/0:18,0:18:54.19:0,54,3341	0/0:21,0:21:60.18:0,60,3681	0/0:21,0:21:63.21:0,63,4328	0/0:32,0:32:93.31:0,93,6304	0/0:39,0:39:99:0,114,8106	0/0:18,0:18:54.16:0,54,3141
chr10	79001515	.	AT	A	557.98	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.132;DP=329;FS=1.708;HRun=9;HaplotypeScore=33.5662;InbreedingCoeff=0.8803;MQ=65.96;MQ0=0;MQRankSum=-3.511;QD=15.94;ReadPosRankSum=1.327;VQSLOD=3.0191;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:12.01:109,12,0	0/0:2,0:2:6.02:0,6,69	0/0:4,0:4:9.03:0,9,104	0/0:10,0:11:22.92:0,23,224	0/0:12,0:12:33.05:0,33,358	1/1:1,11:12:30.01:273,30,0	1/1:0,4:4:12.01:110,12,0	0/0:33,0:33:75.21:0,75,856	1/1:1,11:12:24.01:219,24,0	0/0:10,0:9:21.05:0,21,233	0/0:9,0:9:27.01:0,27,292	0/0:12,0:12:33.10:0,33,378	0/0:13,0:13:15.57:0,16,329	0/0:12,0:12:30.09:0,30,345	0/0:14,0:14:42.12:0,42,480	0/0:15,0:15:30.08:0,30,335	0/0:12,0:12:30.09:0,30,341	0/0:20,0:20:51.11:0,51,574	0/0:18,0:18:45.12:0,45,511	0/0:4,0:4:12.04:0,12,138	0/0:9,0:9:27.08:0,27,312	0/0:3,0:3:8.99:0,9,87	0/0:10,1:11:5.66:0,6,317	0/0:10,0:10:24.07:0,24,277	0/0:10,0:10:27.08:0,27,311	0/0:13,0:13:39.10:0,39,440	0/0:26,0:26:63.13:0,63,692	0/0:11,0:11:33.05:0,33,356
chr10	79001687	.	GTA	G	78.33	PASS	AB=0.853;AC=12;AF=0.545;AN=22;BaseQRankSum=0.844;DP=134;FS=0.000;HRun=0;HaplotypeScore=20.3606;InbreedingCoeff=0.2057;MQ=68.05;MQ0=2;MQRankSum=-1.111;QD=1.45;ReadPosRankSum=-0.666;VQSLOD=0.9101;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:5.82:0,6,46	./.	./.	0/0:5,0:3:0:0,0,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:4,1:5:3.01:33,3,0	1/1:2,0:3:5.68:28,6,0	1/1:1,0:2:2.84:14,3,0	./.	0/1:7,5:12:20.49:20,0,80	0/1:18,0:17:0.28:42,0,0	./.	./.	1/1:1,0:3:2.94:18,3,0	./.	./.	0/0:4,0:4:3.01:0,3,43	./.	0/0:5,0:5:3.01:0,3,44	./.	1/1:11,0:9:2.80:14,3,0
chr10	79004009	.	ACCTTACTCTTATGGCTGT	A	1923.52	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=8.628;DP=568;FS=8.710;HRun=0;HaplotypeScore=245.5582;InbreedingCoeff=0.6644;MQ=73.31;MQ0=0;MQRankSum=-4.162;QD=15.64;ReadPosRankSum=1.611;VQSLOD=1.1631;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:47,0:47:99:187,0,104	0/0:8,0:8:24.08:0,24,1604	0/0:14,0:14:41.99:0,42,821	0/0:16,0:16:31.15:0,31,699	0/0:11,0:11:33.05:0,33,462	0/0:15,0:14:32.50:0,32,1361	0/0:25,0:25:40.81:0,41,1087	0/0:19,0:19:54.09:0,54,957	0/0:16,0:16:38:0,38,2146	0/0:13,0:13:36.09:0,36,700	0/0:13,0:13:39.06:0,39,1041	1/1:0,20:20:12.04:615,12,0	1/1:1,9:10:8.68:459,9,0	1/1:1,17:18:12.04:515,12,0	0/0:20,0:20:57.17:0,57,3596	0/0:15,0:15:42.13:0,42,2652	0/0:26,0:26:72.23:0,72,3882	0/1:28,0:27:99:292,0,2505	0/0:23,0:22:56.95:0,57,1368	0/0:25,0:25:72.14:0,72,2205	0/0:41,0:41:99:0,117,4868	0/0:11,0:11:33.07:0,33,813	0/0:27,0:27:72.16:0,72,2237	0/0:44,0:44:99:0,120,7438	0/0:17,0:17:48.13:0,48,1364	0/0:20,0:20:60.16:0,60,1963	0/0:10,0:9:27.06:0,27,1091	0/0:16,0:16:39.11:0,39,2225
chr10	79004014	.	ACTCTTATGGCTGTCCTTC	A	1838.21	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=8.346;DP=563;FS=0.000;HRun=0;HaplotypeScore=243.3482;InbreedingCoeff=0.5400;MQ=73.42;MQ0=0;MQRankSum=-3.168;QD=10.44;ReadPosRankSum=1.895;VQSLOD=2.3013;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,38:44:18.06:330,18,0	0/0:9,0:9:27.05:0,27,1717	0/0:14,0:14:29.22:0,29,652	0/0:17,0:17:36.04:0,36,702	0/0:14,0:14:30:0,30,442	0/1:15,0:14:49.56:50,0,1071	0/1:26,0:26:99:170,0,1114	0/0:19,0:19:42.09:0,42,856	0/1:16,0:16:38.41:38,0,1806	0/0:13,0:13:21.01:0,21,363	0/0:13,0:13:26.99:0,27,769	1/1:20,0:20:12.04:541,12,0	1/1:10,0:10:8.68:402,9,0	1/1:17,0:17:12.04:443,12,0	0/0:19,0:19:51.13:0,51,3372	0/0:15,0:15:42.12:0,42,2510	0/0:25,0:25:72.13:0,72,3690	0/1:28,0:27:32.78:33,0,3185	0/0:22,0:21:35.68:0,36,929	0/0:27,0:27:57.09:0,57,1926	0/0:41,0:41:98.72:0,99,4347	0/0:12,0:12:27:0,27,639	0/0:26,0:26:53.92:0,54,1766	0/0:42,0:42:99:0,105,7371	0/0:16,0:16:42.08:0,42,985	0/0:21,0:21:50.97:0,51,1737	0/0:9,0:9:21.03:0,21,940	0/0:13,0:13:36.09:0,36,2080
chr10	79005413	.	TTC	T	7779.21	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=16.044;DP=794;FS=5.199;HRun=0;HaplotypeScore=91.9424;InbreedingCoeff=0.9983;MQ=85.84;MQ0=0;MQRankSum=-3.439;QD=37.04;ReadPosRankSum=5.483;VQSLOD=6.5272;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,60:60:99:2224,153,0	0/0:9,0:9:27.09:0,27,505	0/0:28,0:28:78.27:0,78,1403	0/0:22,0:22:62.49:0,62,1037	0/0:39,0:39:99:0,117,2124	1/1:0,18:18:48.16:707,48,0	1/1:0,14:14:39.13:574,39,0	0/0:29,0:29:84.28:0,84,1534	1/1:0,29:29:78.26:1149,78,0	0/0:44,0:44:99:0,132,2463	0/0:32,0:32:90.31:0,90,1674	1/1:2,32:34:81.14:1185,81,0	1/1:3,26:29:72.24:1057,72,0	1/1:2,24:26:60.20:883,60,0	0/0:30,0:30:87.30:0,87,1630	0/0:24,2:26:31.07:0,31,1276	0/0:30,0:30:90.31:0,90,1647	0/0:25,0:25:66.23:0,66,1190	0/0:28,0:28:75.25:0,75,1332	0/0:28,0:28:84.29:0,84,1557	0/0:41,0:41:99:0,123,2212	0/0:24,0:24:72.25:0,72,1348	0/0:27,0:27:78.27:0,78,1453	0/0:30,0:30:87.20:0,87,1517	0/0:28,0:28:75.26:0,75,1395	0/0:43,0:43:99:0,126,2350	0/0:15,0:15:45.14:0,45,812	0/0:6,0:6:18.06:0,18,337
chr10	79007848	.	AACACACACACAC	A	1796.69	PASS	AB=0.889;AC=24;AF=0.444;AN=54;BaseQRankSum=3.807;DP=473;FS=7.416;HRun=0;HaplotypeScore=164.6735;InbreedingCoeff=0.5963;MQ=73.94;MQ0=10;MQRankSum=-2.234;QD=8.94;ReadPosRankSum=0.747;VQSLOD=1.8250;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:9:0,9,92	1/1:0,4:4:3.48:100,3,0	./.	0/0:36,0:21:0.47:0,0,1	1/1:9,12:22:0.92:288,1,0	0/0:13,0:12:12.50:0,12,253	0/0:23,0:24:21.36:0,21,551	0/1:21,0:21:0.54:4,0,1	0/0:11,0:10:12.04:0,12,263	1/1:10,0:12:9.03:235,9,0	1/1:8,2:10:6:56,6,0	1/1:16,0:18:9.02:193,9,0	1/1:5,0:9:3.01:32,3,0	0/0:5,0:20:0:0,0,0	0/0:12,5:17:0.47:0,0,1	0/1:10,4:13:19.18:132,0,19	0/0:16,0:20:36.12:0,36,1400	0/0:17,0:18:32.90:0,33,911	1/1:8,4:12:5.97:239,6,0	1/1:8,5:13:6.02:143,6,0	1/1:35,1:34:9.01:143,9,0	0/0:12,0:12:12.04:0,12,565	0/0:5,0:5:3.01:0,3,175	0/0:24,0:25:42.13:0,42,1699	1/1:5,13:18:5.89:199,6,0	0/0:10,0:10:19.22:0,19,404	1/1:8,1:11:8.96:205,9,0	0/0:8,0:8:15.05:0,15,776
chr10	79007898	.	C	CAT	488.15	PASS	AB=0.676;AC=5;AF=0.089;AN=56;BaseQRankSum=5.559;DP=659;FS=0.945;HRun=0;HaplotypeScore=126.6625;InbreedingCoeff=0.7309;MQ=47.96;MQ0=17;MQRankSum=-0.770;QD=10.17;ReadPosRankSum=-1.034;VQSLOD=3.1849;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:36.25:0,36,273	0/0:15,0:15:30.53:0,31,483	0/0:51,0:9:27.01:0,27,342	0/0:55,1:8:21.02:0,21,284	0/0:28,0:28:50.94:0,51,789	1/1:3,7:9:6:74,6,0	0/1:12,10:22:11.95:255,0,12	0/0:33,0:33:96.12:0,96,1375	1/1:7,8:14:17.92:278,18,0	0/0:22,0:21:62.91:0,63,852	0/0:16,0:16:36.05:0,36,533	0/0:19,0:19:45.12:0,45,659	0/0:17,0:17:33:0,33,433	0/0:29,0:29:32.96:0,33,496	0/0:16,0:16:27.06:0,27,439	0/0:18,0:18:39.07:0,39,551	0/0:33,0:33:80.82:0,81,1187	0/0:17,0:17:45.05:0,45,634	0/0:16,0:15:41.43:0,41,541	0/0:14,0:14:21.06:0,21,310	0/0:42,0:41:31.36:0,31,609	0/0:17,0:16:39.08:0,39,589	0/0:12,0:12:24.04:0,24,362	0/0:41,0:41:99:0,102,1612	0/0:22,0:22:30.10:0,30,480	0/0:21,0:21:63.20:0,63,996	0/0:15,0:15:39.10:0,39,563	0/0:9,0:9:17.92:0,18,240
chr10	79007910	.	T	TAC	341.96	PASS	AB=0.759;AC=4;AF=0.071;AN=56;BaseQRankSum=3.854;DP=662;FS=0.000;HRun=0;HaplotypeScore=131.4344;InbreedingCoeff=-0.0622;MQ=51.35;MQ0=13;MQRankSum=-1.976;QD=3.32;ReadPosRankSum=-1.670;VQSLOD=2.0190;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:31:47.74:0,48,485	0/0:14,0:14:24.07:0,24,290	0/1:56,0:15:3.03:3,0,88	0/0:57,0:12:11.86:0,12,123	0/0:29,0:30:62.79:0,63,737	0/1:4,7:10:26.79:88,0,27	0/1:17,4:21:58.66:88,0,59	0/0:31,0:33:53.98:0,54,619	0/1:5,9:14:15.07:265,0,15	0/0:26,0:25:38.59:0,39,422	0/0:17,0:19:44.80:0,45,498	0/0:24,0:24:59.49:0,59,431	0/0:16,0:16:35.83:0,36,275	0/0:21,0:21:32.71:0,33,246	0/0:17,0:17:36.10:0,36,423	0/0:16,0:18:41.79:0,42,461	0/0:33,0:35:68.37:0,68,773	0/0:15,0:17:32.76:0,33,354	0/0:14,0:14:24.05:0,24,267	0/0:18,0:19:35.94:0,36,412	0/0:34,0:36:33.40:0,33,376	0/0:17,0:17:38.95:0,39,448	0/0:12,0:12:24.06:0,24,278	0/0:35,0:36:69.03:0,69,798	0/0:22,0:22:39.12:0,39,470	0/0:21,0:21:51.15:0,51,606	0/0:14,0:14:36.11:0,36,431	0/0:7,0:7:3.01:0,3,36
chr10	79013109	.	T	TAC	297.75	PASS	AB=1.000;AC=8;AF=0.148;AN=54;BaseQRankSum=3.756;DP=469;FS=2.481;HRun=0;HaplotypeScore=80.6266;InbreedingCoeff=0.5691;MQ=58.16;MQ0=13;MQRankSum=-0.721;QD=4.25;ReadPosRankSum=-0.682;VQSLOD=1.6708;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:13,0:13:11.97:0,12,139	0/0:25,0:4:5.95:0,6,47	0/0:43,0:9:15:0,15,164	0/0:26,0:26:35.86:0,36,393	1/1:9,0:10:12.02:127,12,0	1/1:8,2:20:0.40:115,0,0	0/0:25,0:25:24.04:0,24,267	1/1:4,7:12:12.04:172,12,0	0/0:20,0:20:33.10:0,33,385	0/0:14,0:14:18.05:0,18,200	0/0:4,0:4:6.02:0,6,70	0/0:14,0:14:33.06:0,33,356	0/0:14,0:14:27.06:0,27,302	0/0:18,0:18:30.07:0,30,338	0/1:13,0:13:2.49:2,0,173	0/0:15,0:15:32.90:0,33,386	0/1:14,0:15:5.64:6,0,218	0/0:10,0:8:8.15:0,8,104	0/0:17,0:18:33.10:0,33,383	0/0:26,0:25:38.36:0,38,346	0/0:23,0:23:57.15:0,57,643	0/0:15,0:15:20.89:0,21,223	0/0:17,0:17:36.09:0,36,408	0/0:9,0:8:15.04:0,15,175	0/0:20,0:19:44.45:0,44,479	0/0:21,0:21:32.85:0,33,333	0/0:7,0:7:8.86:0,9,103
chr10	79013134	.	ATG	A	2460.24	PASS	AB=0.700;AC=39;AF=0.722;AN=54;BaseQRankSum=4.082;DP=499;FS=7.284;HRun=0;HaplotypeScore=76.3816;InbreedingCoeff=0.4011;MQ=52.90;MQ0=21;MQRankSum=1.077;QD=6.49;ReadPosRankSum=1.699;VQSLOD=1.8804;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:3.32:0,3,24	1/1:6,11:17:14.37:147,14,0	0/0:23,0:3:3.01:0,3,38	./.	1/1:12,11:23:8.65:102,9,0	1/1:10,1:11:9.01:102,9,0	1/1:20,0:20:12.88:118,13,0	1/1:17,7:23:15.03:161,15,0	1/1:12,0:12:14.98:138,15,0	1/1:12,9:21:24.06:263,24,0	0/1:7,6:13:0:0,0,0	1/1:4,1:5:2.84:14,3,0	1/1:8,0:12:17.27:107,17,0	1/1:4,0:14:11.36:56,11,0	0/1:5,13:18:6.92:153,0,7	1/1:5,11:15:9.50:103,9,0	0/0:18,0:18:0.11:0,0,495	1/1:9,3:13:24.07:273,24,0	1/1:13,3:6:5.83:36,6,0	1/1:8,15:23:12.03:137,12,0	0/1:13,15:26:27.39:90,0,27	0/1:19,1:20:3.98:4,0,353	0/0:11,0:11:11.87:0,12,141	0/0:22,0:22:26.09:0,26,332	1/1:7,7:13:2.98:34,3,0	0/1:10,14:23:9.20:272,0,9	1/1:4,19:23:18.05:205,18,0	1/1:5,6:9:9.03:103,9,0
chr10	79013370	.	TAAG	T	600.80	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.207;DP=521;FS=16.183;HRun=0;HaplotypeScore=71.5236;InbreedingCoeff=0.8942;MQ=59.75;MQ0=3;MQRankSum=-6.055;QD=21.46;ReadPosRankSum=-0.765;VQSLOD=1.8894;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:27:48.01:696,48,0	0/0:3,0:3:9.03:0,9,199	0/0:30,0:21:57.07:0,57,1040	0/0:22,0:20:45.70:0,46,1009	0/0:23,0:23:69.17:0,69,1458	0/0:14,0:14:36.04:0,36,745	0/0:15,0:15:42.14:0,42,926	0/0:24,0:24:60.21:0,60,1285	0/0:20,0:20:54.10:0,54,1094	0/0:15,0:15:45.14:0,45,918	0/0:12,0:12:35.84:0,36,663	0/0:11,0:11:33.11:0,33,728	0/0:13,0:13:39.13:0,39,861	0/0:14,0:14:36.11:0,36,739	0/0:13,0:13:36.11:0,36,734	0/0:13,0:13:39.12:0,39,819	0/0:26,0:26:66.22:0,66,1409	0/0:26,0:26:66.21:0,66,1414	0/0:21,0:19:51.15:0,51,1046	0/0:17,0:17:48.14:0,48,977	0/0:38,0:38:99:0,105,2258	0/0:23,0:23:63.19:0,63,1271	0/0:15,0:15:42.14:0,42,927	0/0:21,0:21:60.19:0,60,1264	0/0:5,0:5:9.03:0,9,199	0/0:26,0:26:75.25:0,75,1607	0/0:24,0:23:63.22:0,63,1390	0/0:9,0:9:27.09:0,27,596
chr10	79013876	.	CAG	C	1424.18	PASS	AB=0.954;AC=18;AF=0.321;AN=56;BaseQRankSum=7.494;DP=1130;FS=14.656;HRun=0;HaplotypeScore=186.3871;InbreedingCoeff=-0.3533;MQ=46.53;MQ0=63;MQRankSum=-5.889;QD=2.09;ReadPosRankSum=-3.774;VQSLOD=0.6706;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:42.74:0,43,289	0/1:17,1:14:2.98:3,0,96	0/1:62,0:26:37.28:37,0,185	0/1:71,0:26:8.22:8,0,209	1/1:7,8:13:5.61:56,6,0	0/1:18,6:23:49.33:124,0,49	0/1:67,19:71:99:646,0,231	0/1:24,1:22:65.85:66,0,266	0/1:54,2:43:83.71:84,0,197	0/1:56,0:41:99:244,0,229	0/0:17,0:15:18.02:0,18,179	0/0:36,0:26:29.75:0,30,288	0/1:35,1:28:28.07:28,0,229	0/1:49,2:37:3.12:3,0,342	0/1:36,2:34:79.21:79,0,284	0/0:25,0:18:5.82:0,6,59	0/0:38,0:37:66.01:0,66,1216	0/1:32,3:32:82.56:83,0,415	0/0:29,0:22:5.47:0,5,348	0/1:28,1:20:46.01:46,0,81	0/0:157,4:151:45.66:0,46,1923	0/0:27,0:19:0.15:0,0,208	0/1:19,0:8:11.45:11,0,66	0/0:53,0:47:74:0,74,1314	0/0:28,0:21:20.83:0,21,202	0/1:41,0:28:19.56:20,0,311	0/1:18,0:16:39.12:39,0,169	0/0:5,0:2:3.01:0,3,57
chr10	79013878	.	G	GAC	3146.89	PASS	AB=0.867;AC=18;AF=0.333;AN=54;BaseQRankSum=-8.653;DP=1071;FS=4.737;HRun=0;HaplotypeScore=171.5365;InbreedingCoeff=-0.2186;MQ=46.73;MQ0=64;MQRankSum=0.805;QD=5.18;ReadPosRankSum=0.076;VQSLOD=2.8365;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:31:0.40:0,0,20	0/0:17,1:14:6.01:0,6,60	./.	0/0:69,0:26:6.01:0,6,61	0/0:12,0:11:5.52:0,6,25	0/0:20,0:23:15.70:0,16,69	0/0:72,0:69:77.66:0,78,397	0/1:21,0:18:35.81:38,0,36	0/0:44,0:38:28.63:0,29,173	1/1:46,4:38:15.63:335,16,0	0/1:13,3:15:16.36:126,0,16	0/1:31,5:26:96.71:158,0,97	0/1:24,8:25:78.70:115,0,79	0/1:36,9:32:71.02:162,0,71	0/1:31,3:32:99:109,0,112	1/1:16,6:17:3.01:46,3,0	0/0:38,0:37:24.38:0,24,484	0/1:17,14:31:63.78:242,0,64	0/1:25,2:21:19.04:120,0,19	0/1:22,2:15:5.60:40,0,6	0/1:80,68:146:57.47:1317,0,57	0/0:25,0:18:12.03:0,12,133	0/0:20,0:9:5.38:0,5,43	0/0:52,0:46:65.52:0,66,696	0/1:23,4:21:31.71:208,0,32	0/1:29,6:24:42.79:205,0,43	0/1:14,2:14:43.77:80,0,44	0/0:5,0:2:3.01:0,3,34
chr10	79013891	.	A	AG	54.77	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.481;DP=979;FS=0.000;HRun=0;HaplotypeScore=166.2816;InbreedingCoeff=0.6210;MQ=45.71;MQ0=67;MQRankSum=-3.672;QD=2.74;ReadPosRankSum=-0.588;VQSLOD=3.1652;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,7:20:18.88:146,19,0	0/0:7,0:4:6.02:0,6,84	0/0:60,0:16:27.52:0,28,324	0/0:68,0:22:35.60:0,36,422	0/0:7,0:5:5.92:0,6,41	0/0:22,0:20:23.68:0,24,196	0/0:89,0:74:99:0,143,1432	0/0:21,0:18:54.14:0,54,701	0/0:62,0:44:60.07:0,60,618	0/0:34,0:21:47.84:0,48,510	0/0:12,0:7:14.86:0,15,141	0/0:41,0:29:32.79:0,33,330	0/0:31,0:22:32.43:0,32,356	0/0:56,0:36:35.38:0,35,381	0/0:31,0:29:48:0,48,557	0/0:18,0:13:12.02:0,12,148	0/0:36,0:35:95.41:0,95,1236	0/0:32,0:28:53.57:0,54,519	0/0:22,0:18:48.57:0,49,618	0/0:10,0:6:8.95:0,9,84	0/0:145,0:140:99:0,214,2450	0/0:13,0:7:12.04:0,12,168	0/0:21,0:12:5.93:0,6,59	0/0:49,0:45:92.19:0,92,1270	0/0:19,0:13:20.90:0,21,193	0/0:34,0:22:54.06:0,54,635	0/0:12,0:10:23.99:0,24,273	0/0:7,0:3:6.02:0,6,83
chr10	79014105	.	A	ACACACAC	1676.11	PASS	AB=0.952;AC=13;AF=0.232;AN=56;BaseQRankSum=9.321;DP=1440;FS=73.337;HRun=0;HaplotypeScore=178.6201;InbreedingCoeff=-0.1414;MQ=33.82;MQ0=222;MQRankSum=-6.408;QD=2.12;ReadPosRankSum=1.138;VQSLOD=0.1876;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:3:6.02:137,6,0	0/0:11,0:8:21.04:0,21,499	0/0:30,0:10:6.53:0,7,334	0/1:38,0:11:1.38:1,0,374	0/0:17,0:13:39.07:0,39,955	0/1:80,0:23:70.20:70,0,309	0/0:240,0:66:86.84:0,87,1941	0/0:15,0:9:27.06:0,27,692	0/1:214,0:68:99:187,0,2093	0/0:34,0:21:51.14:0,51,1298	0/0:7,0:2:5.38:0,5,88	0/1:87,0:39:6.48:6,0,1821	0/0:92,0:34:62.83:0,63,1549	0/1:131,0:67:99:158,0,2693	0/1:25,2:21:99:131,0,818	0/1:24,3:21:99:243,0,820	0/1:33,3:22:99:313,0,821	0/0:32,0:20:36.08:0,36,962	0/1:16,1:12:62.29:62,0,798	0/1:18,1:14:63.72:64,0,805	0/1:88,10:67:99:451,0,3086	0/0:24,0:13:33.08:0,33,832	0/0:20,0:10:24.04:0,24,542	0/0:57,0:28:54.59:0,55,1373	0/0:6,0:4:3.01:0,3,84	0/0:45,0:27:37.23:0,37,1855	0/0:12,0:9:24.08:0,24,566	0/0:8,0:6:15.04:0,15,418
chr10	79014172	.	GCA	G	556.57	PASS	AB=0.913;AC=19;AF=0.365;AN=52;BaseQRankSum=7.892;DP=2756;DS;FS=7.727;HRun=0;HaplotypeScore=189.4985;InbreedingCoeff=-0.4046;MQ=21.76;MQ0=957;MQRankSum=-5.977;QD=0.32;ReadPosRankSum=-0.972;VQSLOD=1.9173;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:47,2:11:3.01:40,3,0	0/0:21,2:11:6.06:0,6,210	./.	./.	0/1:42,12:21:41.70:42,0,45	0/1:173,1:65:6.80:7,0,525	0/0:246,1:78:9.94:0,10,400	0/0:58,0:10:5.99:0,6,59	0/1:244,2:82:10.89:11,0,476	0/1:98,12:24:33.50:33,0,535	0/1:30,1:11:6.50:6,0,46	0/1:212,6:100:12.27:12,0,952	0/0:161,7:70:1.72:0,2,710	0/0:241,0:106:83.66:0,84,1450	0/1:57,20:36:92.14:92,0,374	0/1:39,12:25:0.77:1,0,525	0/1:96,5:60:75.73:76,0,489	0/0:82,6:61:32.96:0,33,400	0/1:43,3:8:24.91:25,0,193	0/1:35,5:15:0.75:1,0,117	0/1:207,43:96:99:197,0,907	0/1:57,3:27:8.18:8,0,18	0/1:49,0:18:2.86:3,0,55	0/0:147,5:75:34.12:0,34,838	0/1:35,2:8:43.20:44,0,43	0/1:72,3:28:44.87:45,0,610	0/1:31,11:20:54.56:55,0,371	0/0:17,0:7:9.03:0,9,146
chr10	79014215	.	ACACACT	A	122.74	PASS	AB=0.975;AC=11;AF=0.229;AN=48;BaseQRankSum=4.208;DP=2880;DS;FS=6.616;HRun=0;HaplotypeScore=156.0755;InbreedingCoeff=-0.0263;MQ=16.58;MQ0=1413;MQRankSum=-1.759;QD=0.11;ReadPosRankSum=-2.786;VQSLOD=1.8569;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:63,1:21:3.01:0,3,69	0/0:21,0:8:6.02:0,6,195	./.	./.	1/1:42,0:7:1.36:3,1,0	0/1:248,2:61:47.91:48,0,436	0/0:249,1:54:28.41:0,28,1087	0/0:37,0:3:9.03:0,9,238	0/1:246,4:63:35.88:36,0,886	0/0:105,0:13:39.13:0,39,1170	./.	0/0:239,9:82:30.10:0,30,1025	0/1:179,9:63:32.12:32,0,766	0/0:238,12:72:20.63:0,21,485	0/0:80,6:23:20.94:0,21,662	0/1:56,4:16:41.82:42,0,701	0/1:106,2:53:15.11:15,0,971	0/1:86,2:51:60.12:60,0,110	0/0:28,0:3:9.03:0,9,224	0/0:63,0:12:0:0,0,1	0/0:249,0:78:35.74:0,36,1051	0/1:50,0:12:3.61:4,0,15	1/1:37,1:8:1.25:3,1,0	0/0:164,1:70:39:0,39,1360	0/0:37,9:10:6.02:0,6,194	0/0:85,0:22:54.18:0,54,1800	0/0:47,0:11:5.14:0,5,164	./.
chr10	79014219	.	ACT	A	126.39	PASS	AB=0.987;AC=10;AF=0.208;AN=48;BaseQRankSum=3.736;DP=2932;DS;FS=6.004;HRun=0;HaplotypeScore=144.8557;InbreedingCoeff=0.1091;MQ=16.54;MQ0=1442;MQRankSum=-2.278;QD=0.12;ReadPosRankSum=-3.264;VQSLOD=1.2315;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:21:2.98:0,3,21	0/0:21,1:8:5.61:0,6,112	./.	./.	0/1:45,0:8:0:0,0,0	0/1:249,1:59:17.68:18,0,189	0/0:250,0:51:14.94:0,15,440	0/0:37,0:3:9:0,9,136	0/1:248,2:67:13.50:14,0,378	0/1:113,1:16:39.23:39,0,528	./.	0/0:245,5:80:30.09:0,30,550	0/0:194,2:63:14.59:0,15,305	0/1:240,9:71:99:116,0,210	0/0:82,2:21:21.06:0,21,323	0/0:64,1:18:9.54:0,10,320	0/0:110,0:54:14.77:0,15,530	0/1:91,2:51:7.98:8,0,26	0/0:30,0:3:8.61:0,9,93	0/0:68,1:15:0.37:0,0,1	0/0:241,8:77:35.26:0,35,444	1/1:50,1:12:3.01:45,3,0	1/1:37,0:9:0.89:2,1,0	0/0:157,3:69:38.96:0,39,749	0/0:48,0:10:5.94:0,6,113	0/0:91,0:24:37.18:0,37,972	0/0:44,0:12:5.23:0,5,58	./.
chr10	79014655	.	G	GCAAA	151.18	PASS	AB=0.992;AC=8;AF=0.182;AN=44;BaseQRankSum=4.156;DP=3777;DS;FS=7.845;HRun=0;HaplotypeScore=167.4022;InbreedingCoeff=-0.0895;MQ=14.12;MQ0=1828;MQRankSum=-0.475;QD=0.10;ReadPosRankSum=-2.541;VQSLOD=1.5769;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:96,0:18:3.01:0,3,58	0/0:34,0:2:2.78:0,3,25	./.	./.	0/0:82,1:22:3.01:0,3,58	0/1:247,1:46:82.10:82,0,517	0/1:248,2:44:30.74:31,0,436	./.	0/0:249,0:70:1.24:0,1,1219	0/0:190,0:18:51.16:0,51,954	0/0:53,0:9:3.01:0,3,58	0/0:246,4:74:27.69:0,28,1064	0/1:247,3:77:10.31:10,0,756	0/1:247,2:76:46.97:47,0,711	0/0:144,0:40:21.26:0,21,391	0/1:144,2:36:60.34:60,0,326	0/1:174,0:51:1.10:1,0,358	0/0:120,1:40:29.13:0,29,434	0/0:50,0:4:12.04:0,12,230	0/0:105,0:15:3.01:0,3,58	1/1:246,0:51:3.81:34,4,0	./.	./.	0/0:250,0:75:23.15:0,23,407	./.	0/0:146,0:30:54.56:0,55,1287	0/0:62,0:14:20.58:0,21,371	0/0:40,0:12:5.84:0,6,76
chr10	79014659	.	A	ACACACT	744.93	PASS	AB=0.991;AC=9;AF=0.196;AN=46;BaseQRankSum=0.588;DP=3823;DS;FS=13.502;HRun=0;HaplotypeScore=172.4556;InbreedingCoeff=-0.1481;MQ=14.21;MQ0=1837;MQRankSum=1.244;QD=0.41;ReadPosRankSum=-1.227;VQSLOD=2.1352;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:101,0:19:3.01:0,3,69	0/0:41,0:3:3.01:0,3,62	./.	./.	0/0:90,0:22:3.01:0,3,69	0/1:246,2:46:99:172,0,598	0/0:248,1:45:24.02:0,24,543	0/0:35,0:1:2.97:0,3,20	0/1:249,1:74:99:168,0,1382	0/0:199,0:18:51.16:0,51,1126	0/0:53,0:9:3.01:0,3,69	0/1:248,0:75:19.57:20,0,1236	0/1:249,0:73:99:105,0,790	0/1:244,4:75:99:191,0,848	0/0:151,0:42:23.77:0,24,497	0/0:149,0:38:5.69:0,6,384	0/1:180,2:54:81.10:81,0,403	0/0:123,1:39:20.87:0,21,490	0/0:55,1:4:12.04:0,12,276	0/0:102,0:15:2.58:0,3,68	1/1:249,0:51:5.56:105,6,0	./.	./.	0/0:249,1:79:7.81:0,8,431	./.	0/1:147,1:29:28.66:29,0,1459	0/0:65,0:14:20.79:0,21,446	0/0:40,0:12:5.74:0,6,89
chr10	79014692	.	A	ACACACT	847.67	PASS	AB=0.991;AC=11;AF=0.212;AN=52;BaseQRankSum=-0.760;DP=4059;DS;FS=7.439;HRun=0;HaplotypeScore=190.9492;InbreedingCoeff=-0.0504;MQ=15.68;MQ0=1787;MQRankSum=-0.807;QD=0.45;ReadPosRankSum=-1.682;VQSLOD=1.3099;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:109,0:26:6.02:0,6,73	0/0:61,0:7:3.01:0,3,70	./.	./.	0/0:102,0:25:3.01:0,3,69	0/1:249,1:51:99:110,0,420	0/0:250,0:41:36.07:0,36,762	0/0:27,0:1:3.01:0,3,69	0/1:247,3:92:99:308,0,580	0/0:215,0:23:63.22:0,63,1402	0/0:76,0:10:3.01:0,3,69	0/1:246,3:95:50.13:50,0,1289	0/1:246,4:89:99:260,0,869	0/1:248,2:90:43.83:44,0,1151	0/0:165,1:56:32.85:0,33,757	0/0:152,0:46:18.34:0,18,405	0/1:188,1:59:90.09:90,0,252	0/0:131,0:48:11.85:0,12,275	0/0:42,0:3:9.03:0,9,199	0/0:140,0:22:5.22:0,5,129	1/1:249,0:62:3.01:66,3,0	1/1:140,0:25:2.92:17,3,0	0/0:102,0:17:1.25:0,1,3	0/0:248,2:78:5.23:0,5,75	0/0:116,0:15:2.84:0,3,69	0/0:169,0:34:85.38:0,85,1638	0/1:72,0:20:36.78:37,0,381	0/0:50,0:16:12.04:0,12,274
chr10	79014760	.	A	ACT	1041.35	PASS	AB=0.960;AC=12;AF=0.214;AN=56;BaseQRankSum=4.789;DP=2774;DS;FS=48.268;HRun=0;HaplotypeScore=187.8918;InbreedingCoeff=-0.1619;MQ=25.38;MQ0=376;MQRankSum=2.853;QD=1.18;ReadPosRankSum=-2.070;VQSLOD=0.7757;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:29:6:0,6,52	0/0:20,0:8:3.01:0,3,46	0/0:62,1:5:11.97:0,12,155	0/0:76,0:9:14.18:0,14,242	0/0:48,0:28:15.05:0,15,229	0/0:168,0:89:21.01:0,21,252	0/0:247,0:128:11.92:0,12,129	0/0:25,0:13:12.16:0,12,457	0/0:249,0:119:17.74:0,18,156	0/0:118,3:76:99:0,136,2893	0/0:42,1:29:18.05:0,18,254	0/1:222,3:114:18.61:19,0,336	0/0:210,2:117:34.28:0,34,501	0/0:224,3:119:5.66:0,6,75	0/1:73,7:49:99:151,0,129	0/1:62,3:39:34.75:160,0,35	0/1:70,2:36:97.10:97,0,150	0/1:72,2:38:45.42:45,0,113	0/0:32,1:17:28.19:0,28,648	0/1:50,2:29:99:148,0,144	0/1:142,10:83:22.38:377,0,22	0/1:66,2:43:42.28:42,0,140	0/1:47,1:36:45.41:45,0,125	0/0:122,1:61:9.02:0,9,138	0/0:60,1:35:21.06:0,21,300	0/0:108,5:65:99:0,106,2453	1/1:27,1:19:2.84:57,3,0	0/1:18,1:12:46.74:47,0,146
chr10	79015195	.	GCA	G	589.70	PASS	AB=0.898;AC=6;AF=0.120;AN=50;BaseQRankSum=6.807;DP=2269;DS;FS=4.401;HRun=0;HaplotypeScore=188.2982;InbreedingCoeff=0.0416;MQ=26.06;MQ0=793;MQRankSum=-4.502;QD=1.12;ReadPosRankSum=1.000;VQSLOD=2.3266;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:22:4.19:0,4,340	0/1:12,0:3:21.87:22,0,46	./.	./.	0/0:16,1:5:3.01:0,3,52	0/1:145,40:72:99:148,0,571	0/0:179,71:107:57.19:0,57,984	0/0:48,2:1:3.01:0,3,52	0/1:194,53:145:99:498,0,2011	0/0:69,5:14:33.07:0,33,519	./.	0/0:213,26:156:31.13:0,31,2312	0/0:137,21:91:17.01:0,17,1456	0/0:215,26:132:31.05:0,31,1729	0/0:58,4:39:30.10:0,30,518	0/0:49,5:32:20.33:0,20,362	0/0:38,3:26:36.12:0,36,609	0/0:26,0:18:27.09:0,27,461	0/0:31,1:6:18.06:0,18,312	0/0:35,0:5:6.02:0,6,104	0/0:158,9:63:62.80:0,63,1051	1/1:25,2:10:3:29,3,0	0/0:21,2:8:3.01:0,3,52	0/0:76,5:53:96.19:0,96,1659	0/0:37,0:9:6.02:0,6,104	0/1:51,3:15:0.77:1,0,562	0/0:20,3:14:12.02:0,12,208	0/0:9,0:4:3.01:0,3,52
chr10	79015203	.	ACT	A	230.42	PASS	AB=0.974;AC=6;AF=0.115;AN=52;BaseQRankSum=9.566;DP=2224;DS;FS=4.270;HRun=0;HaplotypeScore=191.7986;InbreedingCoeff=0.0370;MQ=27.59;MQ0=674;MQRankSum=-4.521;QD=0.44;ReadPosRankSum=-1.553;VQSLOD=2.6423;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:47,0:24:10.43:10,0,371	0/1:11,1:2:39.80:40,0,52	./.	0/0:20,0:3:5.93:0,6,41	0/0:17,0:7:3.01:0,3,57	0/1:186,3:75:53.04:53,0,649	0/0:250,0:120:72.02:0,72,1193	0/0:50,0:1:3.01:0,3,58	0/1:247,3:154:99:196,0,2274	0/0:72,1:14:33.09:0,33,594	./.	0/0:230,4:155:82.46:0,82,2624	0/0:158,1:96:63.32:0,63,1689	0/0:236,2:135:80.27:0,80,2027	0/0:62,0:41:44.14:0,44,675	0/0:50,0:30:26.21:0,26,434	0/0:41,0:25:42.04:0,42,698	0/0:25,0:17:27.09:0,27,515	0/0:29,0:6:18.06:0,18,345	0/0:32,0:5:6.02:0,6,115	0/0:162,0:62:65.02:0,65,1172	1/1:27,1:10:3.01:46,3,0	0/0:21,0:8:3.01:0,3,58	0/0:86,0:58:99:0,114,1988	0/0:34,0:9:6.02:0,6,115	0/0:50,0:15:18.13:0,18,637	0/0:23,0:14:8.53:0,9,224	0/0:10,0:5:6.01:0,6,80
chr10	79015366	.	G	GCA	1449.33	PASS	AB=0.864;AC=14;AF=0.250;AN=56;BaseQRankSum=4.617;DP=2452;DS;FS=8.181;HRun=0;HaplotypeScore=214.0071;InbreedingCoeff=-0.2240;MQ=27.92;MQ0=477;MQRankSum=-5.360;QD=0.98;ReadPosRankSum=0.686;VQSLOD=1.4357;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:79,0:55:14.51:0,15,579	0/0:19,3:14:2.77:0,3,14	0/0:44,0:2:6.02:0,6,74	0/0:44,0:5:8.51:0,9,81	1/1:19,5:10:3.01:50,3,0	0/0:158,4:80:39.12:0,39,492	0/1:218,14:116:99:163,0,786	0/0:21,0:6:15.04:0,15,175	0/0:244,4:149:71.31:0,71,994	0/1:57,7:30:99:140,0,498	0/0:22,3:14:6.02:0,6,76	0/1:191,18:129:99:408,0,474	0/1:180,12:114:99:125,0,778	0/1:203,21:131:99:185,0,598	0/0:48,11:21:12.51:0,13,152	0/0:46,5:29:21.20:0,21,218	0/0:69,10:62:17.92:0,18,225	0/1:29,21:33:17.10:17,0,32	0/0:41,0:16:33.11:0,33,416	0/0:20,5:11:8.48:0,8,65	0/1:147,58:117:99:296,0,325	0/0:31,2:15:11.78:0,12,151	0/0:15,2:9:6.02:0,6,76	0/1:87,23:88:34.47:34,0,560	0/1:22,6:10:8.13:44,0,8	0/1:57,2:27:39.52:40,0,609	0/1:27,1:18:40.23:56,0,40	0/1:8,7:11:29.54:44,0,30
chr10	79015372	.	A	ACACT	88.41	PASS	AB=0.965;AC=5;AF=0.089;AN=56;BaseQRankSum=8.198;DP=2712;DS;FS=2.926;HRun=0;HaplotypeScore=230.0527;InbreedingCoeff=0.0327;MQ=26.39;MQ0=686;MQRankSum=-4.649;QD=0.20;ReadPosRankSum=2.784;VQSLOD=2.7005;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:85,0:57:36.74:0,37,919	0/0:29,0:16:2.96:0,3,31	0/0:41,0:2:6.02:0,6,102	0/0:41,0:5:8.01:0,8,121	1/1:26,0:9:1.55:4,2,0	0/0:188,1:88:25.91:0,26,721	0/0:249,0:90:47.37:0,47,1009	0/0:19,0:6:18.02:0,18,297	0/0:249,1:129:92.93:0,93,1334	0/0:74,0:30:56.39:0,56,960	0/0:30,0:14:6.02:0,6,113	0/1:248,1:140:0.21:0,0,823	0/0:221,0:124:23.46:0,23,1245	0/0:248,0:142:48.22:0,48,982	0/0:68,0:28:17.92:0,18,273	0/0:64,0:37:26.60:0,27,394	0/0:82,1:63:17.84:0,18,338	0/1:52,1:32:68.61:69,0,86	0/0:46,0:15:33.11:0,33,625	0/0:28,0:11:9.02:0,9,118	0/0:241,0:119:18.78:0,19,587	0/0:45,0:15:12.04:0,12,227	0/0:17,0:8:6.02:0,6,113	0/1:115,3:86:99:106,0,901	0/0:38,0:11:0.23:0,0,26	0/0:66,0:28:61:0,61,1108	0/0:35,0:19:0.62:0,1,95	0/0:17,0:12:0.23:0,0,50
chr10	79015452	.	AACCTGGCTTCACCTG	A	460.67	PASS	AB=0.978;AC=5;AF=0.093;AN=54;BaseQRankSum=4.000;DP=1909;DS;FS=15.705;HRun=0;HaplotypeScore=163.8304;InbreedingCoeff=0.0667;MQ=25.85;MQ0=687;MQRankSum=-1.272;QD=1.29;ReadPosRankSum=-0.034;VQSLOD=2.1866;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:15:8.97:0,9,115	1/1:28,0:7:1.82:5,2,0	0/1:78,0:6:23.60:24,0,284	0/0:71,0:8:11.37:0,11,222	0/0:39,0:3:2.97:0,3,20	0/0:78,0:18:20.99:0,21,521	0/0:120,0:13:9.03:0,9,570	0/0:38,0:11:21.07:0,21,913	0/0:228,0:78:87.62:0,88,2783	0/0:96,0:17:42.11:0,42,2083	0/0:26,0:6:8.99:0,9,270	0/0:129,3:43:44.34:0,44,1763	0/1:104,7:44:99:344,0,2148	0/1:140,1:47:99:190,0,1889	0/0:48,0:22:18.95:0,19,962	0/0:73,0:34:51.17:0,51,2320	0/0:43,0:26:27.01:0,27,911	0/0:29,0:14:12.04:0,12,520	0/0:50,0:7:21.07:0,21,716	0/0:31,0:11:11.60:0,12,476	0/0:132,0:64:51.09:0,51,2127	./.	0/0:29,0:13:2.98:0,3,21	0/0:84,0:56:41.62:0,42,1979	0/0:36,0:11:9.03:0,9,238	0/0:39,0:10:30.06:0,30,1093	0/0:29,0:14:14.69:0,15,698	0/0:14,0:6:3.01:0,3,94
chr10	79015500	.	G	GCA	1570.47	PASS	AB=0.930;AC=10;AF=0.192;AN=52;BaseQRankSum=4.756;DP=1700;DS;FS=43.656;HRun=0;HaplotypeScore=100.0000;InbreedingCoeff=0.0285;MQ=17.19;MQ0=561;MQRankSum=-0.405;QD=1.65;ReadPosRankSum=0.718;VQSLOD=-0.6621;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:3:2.68:0,3,11	./.	0/0:72,1:2:5.50:0,6,46	0/1:76,0:7:3.22:3,0,113	0/0:20,0:7:12.04:0,12,146	0/1:93,18:41:99:270,0,208	0/1:189,25:33:99:138,0,458	0/0:39,0:10:18.06:0,18,220	1/1:191,44:90:1.78:1144,2,0	0/0:56,0:17:33.10:0,33,403	0/0:12,0:5:9.03:0,9,110	0/1:111,1:33:6.04:6,0,154	0/1:75,0:35:64.24:64,0,177	0/0:129,0:48:0.41:0,0,222	0/0:30,0:9:8.86:0,9,87	0/0:24,0:8:6.02:0,6,73	0/0:12,1:4:2.84:0,3,14	1/1:19,0:8:3:26,3,0	0/0:26,0:8:23.40:0,23,202	0/0:17,0:7:9.03:0,9,110	0/0:122,0:48:31.65:0,32,349	0/0:19,0:8:9.03:0,9,110	0/0:12,0:4:6.02:0,6,73	0/1:24,1:18:8.13:43,0,8	0/0:14,0:6:5.85:0,6,50	0/0:22,0:7:15.05:0,15,183	0/0:8,0:5:2.84:0,3,14	./.
chr10	79016559	.	C	CAG	493.10	PASS	AB=0.965;AC=8;AF=0.143;AN=56;BaseQRankSum=2.605;DP=814;FS=5.856;HRun=0;HaplotypeScore=177.9495;InbreedingCoeff=0.2244;MQ=56.67;MQ0=22;MQRankSum=-0.460;QD=2.72;ReadPosRankSum=0.838;VQSLOD=2.1847;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:38.25:0,38,441	0/0:10,0:10:13.72:0,14,88	0/0:33,0:14:38.53:0,39,525	0/0:58,0:31:52.48:0,52,744	0/1:35,0:34:5.75:6,0,234	0/1:11,1:12:4.63:40,0,5	0/1:22,4:22:37.88:48,0,38	0/0:40,0:40:34.91:0,35,371	1/1:10,8:23:32.63:463,33,0	0/0:34,0:33:39.54:0,40,343	0/1:25,0:24:58.80:59,0,113	0/0:20,0:20:23.49:0,23,222	0/0:20,0:20:33.64:0,34,266	0/0:15,0:15:18.76:0,19,181	0/1:37,0:36:5.19:5,0,314	0/0:24,0:23:30.39:0,30,261	0/0:51,0:51:99:0,132,1864	0/0:26,0:25:18.56:0,19,251	0/0:23,0:22:16.71:0,17,237	0/0:20,0:20:30.99:0,31,210	0/0:69,0:66:72.86:0,73,716	0/0:20,0:19:54.12:0,54,733	0/0:23,0:23:60.18:0,60,868	0/0:38,0:37:93.23:0,93,1286	0/0:29,0:29:14.98:0,15,318	0/0:33,0:27:81.09:0,81,1097	0/1:23,0:23:1.09:1,0,217	0/0:5,0:4:9.01:0,9,113
chr10	79016561	.	CAGAG	C	896.36	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=1.544;DP=816;FS=0.000;HRun=0;HaplotypeScore=203.4494;InbreedingCoeff=0.7512;MQ=56.27;MQ0=22;MQRankSum=0.185;QD=10.42;ReadPosRankSum=-0.280;VQSLOD=2.9217;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:47.84:0,48,509	0/0:10,0:10:13.25:0,13,189	0/1:32,0:13:3.17:3,0,136	0/0:56,0:30:15.64:0,16,225	0/0:34,0:33:30.84:0,31,716	0/0:11,0:11:6:0,6,61	0/0:30,0:26:21.41:0,21,171	0/0:38,0:38:51.89:0,52,347	0/0:32,0:31:50.88:0,51,565	0/0:34,0:33:53.27:0,53,588	0/0:25,0:24:34.42:0,34,437	1/1:11,6:19:23.83:316,24,0	1/1:11,8:20:39.04:465,39,0	1/1:8,6:15:20.45:254,20,0	0/0:38,0:37:48.45:0,48,829	0/0:24,0:23:42.02:0,42,571	0/0:53,0:53:99:0,102,1660	0/0:9,0:24:17.99:0,18,234	0/0:23,0:22:0.34:0,0,437	0/0:18,0:18:24.04:0,24,341	0/0:67,0:64:93.54:0,94,1615	0/0:18,0:17:42.07:0,42,656	0/0:24,0:24:45.10:0,45,715	0/0:34,0:36:71.24:0,71,919	0/0:29,0:29:62.69:0,63,865	0/0:33,0:27:38.49:0,38,962	0/0:23,0:23:12.27:0,12,554	0/0:5,0:4:9.03:0,9,166
chr10	79016581	.	G	GAGAGAGACAGAC	2091.90	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-2.184;DP=761;FS=7.249;HRun=0;HaplotypeScore=281.1699;InbreedingCoeff=0.0313;MQ=51.77;MQ0=27;MQRankSum=-1.147;QD=5.04;ReadPosRankSum=-6.480;VQSLOD=0.3690;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:40.61:0,41,539	0/0:8,0:8:6.57:0,7,332	0/0:16,0:7:15.69:0,16,132	0/0:32,0:10:16.05:0,16,97	0/1:35,0:33:2.61:3,0,1000	1/1:2,5:14:3:26,3,0	1/1:34,0:30:35.55:414,36,0	0/1:41,0:33:99:140,0,527	1/1:38,0:37:58.46:1003,58,0	0/1:30,0:30:74.79:75,0,1110	0/1:20,0:19:78.83:79,0,415	0/0:17,0:17:33.37:0,33,540	0/0:17,0:17:39.07:0,39,816	0/0:19,0:18:31.26:0,31,411	0/1:30,0:29:53.34:53,0,1265	0/0:24,0:23:8.89:0,9,921	0/0:46,0:46:99:0,119,2646	0/1:22,0:21:49.96:50,0,132	0/1:23,0:22:85.52:86,0,742	0/1:15,0:15:41.38:41,0,387	0/1:64,0:61:34.69:35,0,2150	0/0:17,0:17:41.70:0,42,975	0/0:22,0:22:57.03:0,57,1280	0/0:41,0:40:83.49:0,83,1868	0/1:24,0:24:99:158,0,621	0/0:32,0:26:42.07:0,42,1257	0/1:24,0:24:99:100,0,928	0/0:12,0:11:17.91:0,18,225
chr10	79016583	.	GAC	G	4286.97	PASS	AB=0.992;AC=32;AF=0.571;AN=56;BaseQRankSum=-0.841;DP=751;FS=1.169;HRun=0;HaplotypeScore=153.0074;InbreedingCoeff=0.4866;MQ=51.29;MQ0=27;MQRankSum=-0.331;QD=8.77;ReadPosRankSum=-3.301;VQSLOD=3.7965;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:38.80:0,39,489	1/1:7,1:8:6.72:92,7,0	0/0:18,0:7:14.85:0,15,177	0/0:35,0:9:16.15:0,16,196	1/1:32,1:31:27.15:337,27,0	1/1:9,0:9:3:27,3,0	0/1:34,0:30:27.40:27,0,171	1/1:35,6:33:33.05:504,33,0	0/1:37,0:36:99:205,0,282	1/1:27,3:30:50.01:641,50,0	1/1:19,2:19:18.81:157,19,0	0/1:19,0:19:84.44:106,0,84	0/1:16,0:16:72.13:77,0,72	0/1:18,1:18:54.85:55,0,113	1/1:28,2:29:31.49:386,31,0	1/1:22,1:22:25.10:217,25,0	0/0:48,0:48:99:0,118,1758	0/1:24,0:23:11.83:75,0,12	1/1:22,0:21:43.03:338,43,0	1/1:15,0:15:17.25:159,17,0	1/1:60,2:59:46.35:541,46,0	0/0:16,0:15:42.09:0,42,633	0/0:21,0:21:56.42:0,56,769	0/0:39,0:38:48.90:0,49,914	1/1:23,0:23:11.33:94,11,0	0/0:31,0:25:61.95:0,62,903	1/1:23,0:23:0.36:249,0,0	0/0:12,0:11:17.88:0,18,208
chr10	79016599	.	GAC	G	353.90	PASS	AB=0.837;AC=10;AF=0.185;AN=54;BaseQRankSum=4.786;DP=755;FS=0.527;HRun=0;HaplotypeScore=153.3884;InbreedingCoeff=0.0133;MQ=50.42;MQ0=34;MQRankSum=-1.704;QD=1.30;ReadPosRankSum=1.238;VQSLOD=2.1639;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,1:43:2.78:35,3,0	0/0:8,0:8:18:0,18,201	./.	0/0:30,0:2:3.01:0,3,44	0/0:28,1:28:17.63:0,18,428	0/0:13,0:13:9.01:0,9,111	0/0:34,0:31:36.10:0,36,527	0/1:44,1:37:17.43:17,0,476	0/0:38,0:37:43.24:0,43,617	0/0:28,1:29:26.58:0,27,546	0/0:18,1:17:24.05:0,24,309	0/1:13,2:22:3.55:81,0,4	0/1:11,2:21:4.32:120,0,4	0/1:10,1:17:17.30:40,0,17	0/0:28,2:29:1.79:0,2,721	0/0:25,2:26:15.64:0,16,608	0/1:38,11:48:43.43:43,0,1142	0/1:16,1:16:11.60:12,0,203	0/1:19,3:20:76.10:76,0,215	0/0:15,0:15:32.91:0,33,337	0/0:58,1:56:74.98:0,75,1060	0/0:16,0:16:38.94:0,39,512	0/0:21,0:21:39.11:0,39,567	0/0:31,7:37:36.49:0,36,993	0/0:18,0:18:29.65:0,30,395	0/1:14,0:27:67.60:68,0,224	0/0:21,2:23:46.17:0,46,463	0/0:4,0:13:4.59:0,5,51
chr10	79017575	.	G	GCA	2596.39	PASS	AB=0.849;AC=18;AF=0.333;AN=54;BaseQRankSum=-1.980;DP=768;FS=27.472;HRun=0;HaplotypeScore=149.8407;InbreedingCoeff=-0.5151;MQ=46.10;MQ0=65;MQRankSum=-1.115;QD=4.31;ReadPosRankSum=0.154;VQSLOD=1.4892;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,1:4:2.84:0,3,14	0/0:31,0:14:6.20:0,6,108	0/1:25,0:9:17.10:17,0,50	0/0:7,4:9:12.04:0,12,145	0/1:24,1:16:15.12:223,0,15	0/1:110,3:79:76.21:76,0,1154	0/1:3,2:4:27.17:87,0,27	0/1:51,4:42:99:456,0,237	0/1:17,10:21:99:316,0,115	0/1:4,5:8:80.49:80,0,87	0/1:47,0:45:19.81:20,0,668	0/1:32,1:24:8.34:8,0,147	0/1:54,2:48:1.39:1,0,398	0/1:7,3:7:24.09:132,0,24	0/1:12,7:18:76.82:210,0,77	0/0:11,0:11:0.77:0,1,262	0/1:18,0:16:16.64:17,0,321	0/1:9,2:6:78.26:78,0,119	0/1:9,6:13:73.41:262,0,73	0/1:43,21:47:99:541,0,327	0/0:15,1:15:30.08:0,30,354	0/0:10,1:9:21.54:0,22,254	0/0:33,1:30:63.43:0,63,708	0/1:8,6:8:37.98:165,0,38	0/0:29,0:19:45.98:0,46,512	0/1:4,1:5:38.27:56,0,38	0/0:11,0:10:12.04:0,12,145
chr10	79017804	.	T	TAC	15403.98	PASS	AB=0.836;AC=29;AF=0.518;AN=56;BaseQRankSum=2.800;DP=3085;DS;FS=5.050;HRun=0;HaplotypeScore=399.4134;InbreedingCoeff=-0.7014;MQ=34.34;MQ0=436;MQRankSum=-5.160;QD=5.40;ReadPosRankSum=8.138;VQSLOD=2.3287;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,5:10:2.62:48,3,0	1/1:16,3:14:3.01:48,3,0	0/0:113,0:8:24.05:0,24,251	0/0:114,0:11:18.05:0,18,205	0/1:29,6:30:99:118,0,169	0/1:188,21:164:99:1060,0,282	0/1:157,45:175:99:2152,0,602	0/1:52,7:36:47.32:47,0,311	0/1:170,36:156:99:1602,0,606	0/1:83,9:68:99:467,0,693	0/1:17,6:19:65.77:170,0,66	0/1:205,30:195:99:1293,0,1212	0/1:210,26:200:99:1094,0,927	0/1:197,34:176:99:1269,0,1127	0/1:60,15:62:99:497,0,439	0/1:56,21:64:99:842,0,326	0/1:75,28:90:99:1159,0,458	0/1:49,20:57:99:601,0,369	0/1:57,7:33:99:245,0,486	0/1:24,6:20:36.07:36,0,97	0/1:210,35:199:99:1159,0,1584	0/1:54,7:43:99:111,0,255	0/1:25,12:28:79:286,0,79	0/1:107,28:103:99:583,0,819	0/1:35,1:25:36.22:36,0,97	0/1:92,6:75:99:258,0,936	0/1:27,5:25:99:99,0,258	1/1:8,5:11:8.99:123,9,0
chr10	79017986	.	G	GCA	8472.11	PASS	AB=0.863;AC=23;AF=0.411;AN=56;BaseQRankSum=1.723;DP=1899;DS;FS=188.664;HRun=0;HaplotypeScore=265.0866;InbreedingCoeff=-0.2795;MQ=44.14;MQ0=112;MQRankSum=-12.871;QD=5.06;ReadPosRankSum=-4.288;VQSLOD=-0.2265;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:3.01:51,3,0	0/0:12,1:10:15.04:0,15,197	0/1:71,3:24:93.53:94,0,527	0/1:48,5:27:85.35:85,0,492	0/0:30,1:27:33.11:0,33,429	0/1:36,22:40:9.40:570,0,9	1/1:59,50:78:38.75:1205,39,0	0/0:26,0:19:39.10:0,39,496	1/1:48,106:101:99:2054,126,0	0/1:67,3:61:99:121,0,1239	0/0:19,0:17:11.99:0,12,157	0/1:138,55:173:99:1229,0,3142	0/1:130,42:156:99:804,0,2750	0/1:168,40:191:99:618,0,3735	0/1:43,7:48:72.77:73,0,849	0/1:30,9:35:99:224,0,783	0/0:47,3:48:45.05:0,45,1165	0/1:45,9:51:99:295,0,996	0/0:36,0:24:63.20:0,63,828	0/1:28,3:28:66.52:67,0,355	0/1:162,24:172:99:467,0,4209	0/0:27,5:32:51.17:0,51,667	0/1:24,5:27:18.15:18,0,360	0/1:64,17:69:99:230,0,1217	0/1:23,5:26:32.59:33,0,321	0/1:51,5:50:99:180,0,1227	0/1:23,1:23:57.33:57,0,429	0/0:16,0:14:30.09:0,30,385
chr10	79018121	.	T	TACACAC	2495.43	PASS	AB=0.985;AC=17;AF=0.340;AN=50;BaseQRankSum=10.435;DP=2158;DS;FS=67.082;HRun=0;HaplotypeScore=320.4859;InbreedingCoeff=-0.4138;MQ=21.42;MQ0=687;MQRankSum=-2.157;QD=1.75;ReadPosRankSum=6.263;VQSLOD=0.2069;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:10:3.01:40,3,0	0/1:31,0:15:99:101,0,103	./.	./.	0/0:48,1:20:0.47:0,0,1	0/1:104,1:53:99:118,0,397	0/0:163,0:48:21.95:0,22,137	0/0:35,0:7:21.03:0,21,374	0/1:159,0:79:99:108,0,606	0/1:95,0:27:99:105,0,849	./.	0/1:161,0:100:99:399,0,1519	0/1:173,0:102:99:258,0,1702	0/1:185,0:122:99:442,0,2845	0/1:78,0:43:99:183,0,694	0/1:59,0:33:99:301,0,599	0/1:68,0:44:12.59:13,0,855	0/0:55,0:38:50.80:0,51,1002	0/0:19,0:6:15.02:0,15,262	0/1:62,1:22:99:195,0,128	0/0:182,0:62:49.45:0,49,982	0/0:52,2:20:2.55:0,3,121	0/0:52,0:17:13.81:0,14,289	0/1:115,0:62:25.24:25,0,698	0/0:54,1:27:2.08:0,2,151	0/1:52,1:16:99:113,0,580	0/1:36,0:28:99:186,0,433	0/1:11,1:4:53.74:54,0,68
chr10	79018122	.	GCA	G	629.69	PASS	AB=0.922;AC=16;AF=0.308;AN=52;BaseQRankSum=5.133;DP=2266;DS;FS=9.673;HRun=0;HaplotypeScore=305.0603;InbreedingCoeff=-0.3425;MQ=21.73;MQ0=693;MQRankSum=-4.705;QD=0.46;ReadPosRankSum=0.719;VQSLOD=0.7031;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,8:11:2.99:0,3,23	0/1:31,1:17:23.31:23,0,107	./.	./.	1/1:46,2:25:1.18:3,1,0	0/1:91,11:55:99:186,0,141	0/0:167,0:52:29.55:0,30,251	0/0:36,0:8:12.04:0,12,192	0/1:150,12:86:99:175,0,276	0/1:89,5:32:88.56:89,0,553	0/0:29,0:8:0.47:0,0,1	0/1:146,8:103:40.55:41,0,1560	0/0:163,4:106:41.52:0,42,1448	0/1:164,11:130:59.35:59,0,1970	0/1:73,4:48:23.27:23,0,581	0/0:53,4:37:48.08:0,48,630	0/1:62,7:47:25.89:26,0,651	0/1:46,8:38:40.84:41,0,571	0/0:16,0:4:9.03:0,9,145	0/0:60,5:25:12.19:0,12,172	0/0:188,0:64:32.67:0,33,884	0/1:53,4:23:26.93:27,0,71	0/1:44,13:19:14.03:14,0,128	0/1:103,14:67:39.67:40,0,498	0/1:51,4:28:20.94:21,0,119	0/0:52,3:18:5.63:0,6,470	0/1:35,3:34:5.32:5,0,358	0/0:14,1:5:12.01:0,12,141
chr10	79018128	.	A	ACACT	5848.85	PASS	AB=0.898;AC=21;AF=0.404;AN=52;BaseQRankSum=6.996;DP=2352;DS;FS=11.932;HRun=0;HaplotypeScore=323.2607;InbreedingCoeff=-0.5732;MQ=21.92;MQ0=753;MQRankSum=-6.518;QD=2.87;ReadPosRankSum=9.372;VQSLOD=1.4270;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:10:3.01:32,3,0	0/1:34,1:18:76.34:113,0,76	./.	./.	0/0:54,1:25:0.44:0,0,2	0/1:82,8:47:99:552,0,99	0/1:140,4:43:59.86:418,0,60	0/0:40,0:6:17.98:0,18,238	0/1:129,21:83:99:832,0,181	0/1:118,0:35:83.79:84,0,664	0/0:32,0:10:0.68:0,1,2	0/1:144,16:106:99:1197,0,1295	0/1:135,13:100:99:439,0,1413	0/1:169,10:133:99:674,0,2009	0/1:76,5:50:99:240,0,560	0/1:53,1:37:99:261,0,473	0/0:68,2:51:21.39:0,21,754	0/0:49,1:34:50.18:0,50,693	0/0:20,0:6:17.99:0,18,236	0/1:62,2:27:98.08:98,0,111	0/1:194,6:77:95.44:95,0,879	0/1:54,2:26:74.91:86,0,75	0/1:58,1:21:63.63:64,0,183	0/1:102,8:71:44.83:45,0,536	0/1:65,2:28:69.37:215,0,69	0/1:57,2:18:99:172,0,424	0/1:42,2:36:99:104,0,320	0/1:13,1:6:63.31:127,0,63
chr10	79018131	.	C	CTCAT	3976.84	PASS	AB=0.991;AC=21;AF=0.404;AN=52;BaseQRankSum=10.144;DP=2283;DS;FS=9.192;HRun=0;HaplotypeScore=314.8111;InbreedingCoeff=-0.5612;MQ=22.37;MQ0=723;MQRankSum=-4.653;QD=2.01;ReadPosRankSum=7.083;VQSLOD=0.7688;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:11:2.84:14,3,0	0/1:35,0:17:88.28:88,0,118	./.	./.	0/0:49,0:23:0.47:0,0,2	0/1:79,6:41:99:496,0,125	0/1:165,4:37:96.35:378,0,96	0/0:40,0:6:18.03:0,18,275	0/1:147,13:75:99:710,0,256	0/1:123,0:37:6.10:6,0,1003	0/0:30,0:10:0.68:0,1,2	0/1:164,0:106:99:813,0,1611	0/1:146,0:92:99:230,0,1712	0/1:199,0:134:99:383,0,2338	0/1:87,0:50:99:136,0,663	0/1:65,0:37:99:137,0,512	0/0:76,0:51:39.27:0,39,914	0/0:53,0:35:50.70:0,51,852	0/0:19,0:6:18.03:0,18,290	0/1:68,0:28:37.94:38,0,144	0/1:224,0:87:59.23:59,0,1048	0/1:51,0:26:68.26:68,0,84	0/1:55,0:23:44.20:44,0,217	0/1:122,0:71:18.82:19,0,658	0/1:67,0:27:79.20:147,0,79	0/1:59,0:18:92.10:92,0,529	0/1:43,0:36:29.64:30,0,388	0/1:17,0:6:87.80:88,0,89
chr10	79018298	.	AAG	A	609.22	PASS	AB=0.817;AC=11;AF=0.306;AN=36;BaseQRankSum=-0.883;DP=171;FS=47.759;HRun=0;HaplotypeScore=36.4303;InbreedingCoeff=0.2351;MQ=69.37;MQ0=14;MQRankSum=2.248;QD=8.96;ReadPosRankSum=-2.498;VQSLOD=1.2203;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:2,1:2:3.01:0,3,41	0/1:9,4:8:86.98:163,0,87	0/1:21,3:12:99:196,0,109	0/0:9,0:8:7.87:0,8,115	1/1:0,1:1:3.01:49,3,0	./.	./.	./.	0/1:6,1:4:36.90:37,0,102	0/0:4,0:3:5.78:0,6,77	0/0:9,1:4:5.95:0,6,57	0/0:11,4:11:15.05:0,15,205	0/0:11,4:8:9.03:0,9,116	./.	0/0:3,5:5:3.01:0,3,38	./.	./.	1/1:1,5:4:12.03:160,12,0	./.	1/1:1,11:6:5.93:90,6,0	0/0:5,0:4:6.49:0,6,78	0/0:3,0:2:6.02:0,6,78	./.	0/0:2,0:2:6.02:0,6,78	1/1:1,1:1:3.01:38,3,0	./.	0/0:1,0:1:3.01:0,3,37
chr10	79018613	.	G	GCA	9236.67	PASS	AB=0.802;AC=31;AF=0.554;AN=56;BaseQRankSum=-5.801;DP=1122;DS;FS=2.744;HRun=0;HaplotypeScore=159.1591;InbreedingCoeff=0.0538;MQ=43.45;MQ0=139;MQRankSum=0.884;QD=10.30;ReadPosRankSum=-1.393;VQSLOD=4.4493;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,4:12:17.92:214,0,18	0/1:9,6:9:56.52:129,0,57	0/0:75,0:9:14.64:0,15,117	0/1:71,0:9:5.85:6,0,62	0/1:28,12:34:28.46:86,0,28	0/1:20,0:14:0:0,0,0	0/1:53,0:43:16.56:22,0,17	0/1:23,13:23:35.81:434,0,36	0/1:39,0:33:5.30:103,0,5	0/1:30,27:45:41.32:843,0,41	1/1:9,10:16:3.01:48,3,0	1/1:26,13:28:39.12:599,39,0	1/1:18,11:26:6.15:540,6,0	0/1:35,14:39:26.62:529,0,27	1/1:18,17:32:9.16:607,9,0	1/1:11,26:37:30.24:970,30,0	0/0:31,0:29:56.66:0,57,656	1/1:8,8:13:21.07:327,21,0	0/0:27,2:12:3.01:0,3,36	0/1:14,21:26:14.88:266,0,15	0/1:131,77:179:1.85:2682,0,2	0/0:16,1:15:15.67:0,16,159	0/0:10,0:8:8.98:0,9,108	0/0:58,0:55:79.07:0,79,907	1/1:12,10:14:6.01:95,6,0	0/1:7,8:11:63.07:306,0,63	1/1:11,8:18:24.08:383,24,0	1/1:6,1:4:3.01:48,3,0
chr10	79018656	.	G	GCA	637	PASS	AB=0.828;AC=4;AF=0.071;AN=56;BaseQRankSum=0.274;DP=1201;DS;FS=2.594;HRun=0;HaplotypeScore=199.8197;InbreedingCoeff=0.3201;MQ=47.62;MQ0=140;MQRankSum=-2.343;QD=7.86;ReadPosRankSum=-1.093;VQSLOD=3.4540;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,10:16:27.09:428,27,0	0/0:17,0:15:21.05:0,21,241	0/0:75,0:18:4.80:0,5,27	0/0:80,2:19:16.43:0,16,96	0/0:32,0:28:36.11:0,36,429	0/0:18,0:14:9.58:0,10,225	0/0:60,0:36:21.39:0,21,562	0/0:47,0:36:29.02:0,29,679	0/1:39,1:22:14.37:14,0,302	0/0:79,1:66:63.50:0,63,1213	0/0:25,0:18:10.78:0,11,269	0/0:43,0:35:66.20:0,66,786	0/0:25,0:19:29.89:0,30,321	0/0:51,0:37:75.21:0,75,878	0/0:43,0:37:62.80:0,63,694	0/0:31,0:34:50.65:0,51,545	0/0:28,0:26:60.18:0,60,714	0/1:9,8:14:20.81:307,0,21	0/0:38,0:23:4.27:0,4,462	0/0:40,0:33:56.71:0,57,656	0/0:197,1:179:99:0,144,2484	0/0:15,0:13:9.03:0,9,107	0/0:11,0:10:11.73:0,12,142	0/0:48,1:51:69.72:0,70,868	0/0:22,0:16:15:0,15,179	0/0:36,0:26:26.16:0,26,531	0/0:24,0:22:32.99:0,33,391	0/0:5,0:3:3.01:0,3,36
chr10	79018699	.	G	GCACA	5590.31	PASS	AB=0.926;AC=33;AF=0.611;AN=54;BaseQRankSum=0.808;DP=1519;FS=11.552;HRun=0;HaplotypeScore=219.6092;InbreedingCoeff=0.1147;MQ=33.27;MQ0=450;MQRankSum=-1.867;QD=4.91;ReadPosRankSum=0.714;VQSLOD=2.0748;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,2:12:3.01:72,3,0	1/1:27,1:13:6.23:84,6,0	0/0:127,0:2:3.01:0,3,35	0/0:118,0:6:6.02:0,6,86	1/1:32,1:22:3.01:72,3,0	0/1:41,0:27:24.60:62,0,25	0/1:94,2:70:99:378,0,131	0/1:58,0:17:18.70:68,0,19	0/1:81,0:51:99:121,0,357	1/1:77,3:42:32.78:521,33,0	0/1:24,2:13:17.08:134,0,17	1/1:46,0:33:25.30:155,25,0	0/1:27,0:16:13.29:13,0,84	0/1:48,0:39:74.79:75,0,142	0/1:41,4:41:34.70:483,0,35	1/1:31,10:38:19.99:927,20,0	0/0:37,0:37:32.64:0,33,655	1/1:15,0:9:3.01:74,3,0	1/1:36,1:14:3.01:72,3,0	1/1:26,3:21:9.03:215,9,0	1/1:202,20:169:51.03:1705,51,0	0/0:23,0:14:18.06:0,18,281	0/0:15,0:11:9.03:0,9,143	0/0:51,0:46:24.08:0,24,382	0/1:41,1:21:41.69:66,0,42	1/1:45,0:23:15.05:223,15,0	1/1:20,5:21:3:72,3,0	./.
chr10	79018820	.	GCA	G	314.69	PASS	AB=0.936;AC=8;AF=0.148;AN=54;BaseQRankSum=5.067;DP=1284;DS;FS=26.273;HRun=0;HaplotypeScore=140.2941;InbreedingCoeff=0.0934;MQ=39.97;MQ0=183;MQRankSum=-0.761;QD=1.09;ReadPosRankSum=2.545;VQSLOD=0.5472;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:12:24.01:0,24,231	0/0:18,0:14:18.06:0,18,290	0/0:48,0:20:27.05:0,27,397	0/0:47,0:14:24.01:0,24,287	0/0:32,1:28:60.19:0,60,951	0/1:18,1:7:31:31,0,39	1/1:54,6:21:14.83:143,15,0	0/0:32,1:25:29.78:0,30,897	0/1:68,5:13:61.81:194,0,62	0/0:75,3:60:26.63:0,27,1738	0/0:28,1:23:33.07:0,33,503	0/0:53,4:33:23.76:0,24,831	0/0:35,0:22:45.11:0,45,692	0/0:57,3:45:3.64:0,4,1005	0/1:50,4:48:26.48:26,0,850	0/0:51,0:48:96.33:0,96,1540	0/1:39,1:38:18.98:19,0,1138	0/1:19,2:18:30.65:31,0,539	0/0:41,1:24:26.79:0,27,877	0/0:42,0:29:48.16:0,48,770	0/0:207,8:204:99:0,179,6142	0/0:25,0:19:24.08:0,24,385	0/0:29,0:19:39.13:0,39,628	0/0:44,1:39:35.84:0,36,1065	0/0:46,1:31:5.73:0,6,591	0/0:39,0:27:39.34:0,39,874	0/1:19,2:18:6.29:6,0,405	./.
chr10	79018934	.	GCACACTCA	G	1281.30	PASS	AB=0.947;AC=12;AF=0.250;AN=48;BaseQRankSum=3.133;DP=1151;DS;FS=0.000;HRun=0;HaplotypeScore=109.3666;InbreedingCoeff=0.0912;MQ=16.43;MQ0=613;MQRankSum=1.037;QD=3.57;ReadPosRankSum=0.895;VQSLOD=2.0161;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:7:6.29:6,0,78	0/0:7,0:4:6.02:0,6,185	./.	./.	0/0:20,0:11:0:0,0,0	1/1:33,0:7:2.97:20,3,0	0/0:112,0:13:12.72:0,13,662	0/0:41,0:10:30.10:0,30,1165	0/1:67,8:20:99:536,0,113	0/0:41,0:13:30.10:0,30,1149	./.	0/1:45,6:19:99:148,0,345	0/1:38,6:18:99:311,0,180	0/1:47,4:22:99:304,0,388	0/0:46,0:31:14.98:0,15,540	0/0:46,1:26:29.23:0,29,1207	0/1:30,1:9:70.48:70,0,152	0/0:27,0:8:6.02:0,6,213	0/0:39,0:7:21.07:0,21,764	0/0:15,0:6:3.01:0,3,131	0/0:227,1:80:24.66:0,25,900	0/1:4,0:1:0:0,0,0	0/1:10,0:6:0:0,0,0	0/0:80,1:32:5.23:0,5,562	1/1:25,0:12:1.83:6,2,0	0/0:20,0:6:18.04:0,18,621	0/0:18,0:17:29.34:0,29,653	./.
chr10	79018938	.	ACT	A	687.23	PASS	AB=0.953;AC=16;AF=0.348;AN=46;BaseQRankSum=4.758;DP=1123;DS;FS=29.815;HRun=0;HaplotypeScore=90.8719;InbreedingCoeff=-0.1374;MQ=15.79;MQ0=601;MQRankSum=0.514;QD=1.20;ReadPosRankSum=0.675;VQSLOD=-0.2719;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:6:2.83:13,0,3	0/1:11,0:6:9.03:9,0,66	./.	./.	0/0:18,0:10:0.47:0,0,1	1/1:32,0:6:2.97:20,3,0	0/1:100,0:14:0.20:0,0,273	0/0:43,0:11:30.08:0,30,540	0/1:75,5:20:34.75:119,0,35	0/0:38,2:14:5.16:0,5,485	0/1:17,0:12:0:0,0,0	0/1:47,4:19:95.86:104,0,96	0/1:36,2:15:46.73:91,0,47	0/1:48,3:21:88.06:173,0,88	0/1:40,1:26:30.29:30,0,214	0/1:44,3:26:16.49:16,0,480	0/1:31,0:8:23.40:24,0,23	0/0:27,0:7:6.02:0,6,85	0/0:38,0:7:21.06:0,21,345	0/0:14,0:5:3.01:0,3,57	0/0:221,2:74:26.47:0,26,350	./.	./.	0/0:79,1:26:8.54:0,9,195	1/1:24,0:12:4.50:22,4,0	0/0:20,0:6:18.03:0,18,270	0/1:13,4:17:99:196,0,180	./.
chr10	79019084	.	GCACACTCA	G	1139.12	PASS	AB=0.948;AC=13;AF=0.310;AN=42;BaseQRankSum=-1.304;DP=813;FS=11.576;HRun=0;HaplotypeScore=61.8318;InbreedingCoeff=-0.1054;MQ=14.04;MQ0=435;MQRankSum=-0.391;QD=2.76;ReadPosRankSum=1.509;VQSLOD=0.4440;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:3:3.01:0,3,36	0/0:13,0:6:6.02:0,6,162	./.	./.	1/1:14,0:5:0.94:2,1,0	0/0:24,3:5:1.27:0,1,12	./.	0/0:34,0:7:16.46:0,16,255	0/1:54,3:18:73.89:74,0,105	0/0:37,0:9:21.05:0,21,597	./.	0/1:46,7:17:99:464,0,156	1/1:27,1:8:5.95:101,6,0	0/1:52,9:19:99:468,0,144	./.	0/1:32,2:12:73.99:74,0,83	0/0:15,0:8:9.02:0,9,180	0/0:15,1:5:3.01:0,3,57	0/1:29,0:3:11.10:11,0,31	0/0:29,0:9:2.99:0,3,82	0/1:93,2:28:37.85:38,0,197	0/0:16,0:8:9.03:0,9,112	0/0:12,2:8:2.60:0,3,10	0/0:28,4:5:3.01:0,3,57	1/1:21,0:5:0.98:19,1,0	0/1:16,0:3:9.98:10,0,49	./.	./.
chr10	79019128	.	CACACACAA	C	76.05	PASS	AB=0.949;AC=5;AF=0.093;AN=54;BaseQRankSum=5.618;DP=1133;FS=4.299;HRun=0;HaplotypeScore=186.1713;InbreedingCoeff=0.0889;MQ=41.77;MQ0=235;MQRankSum=-1.333;QD=0.40;ReadPosRankSum=-4.013;VQSLOD=1.7726;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:2:3:0,3,28	0/0:11,0:6:9.73:0,10,514	0/0:54,0:24:63.68:0,64,1433	0/1:68,1:30:92.16:92,0,1385	0/0:16,0:11:24.98:0,25,805	1/1:37,1:5:1.25:3,1,0	0/0:71,3:20:15.05:0,15,495	0/0:48,0:36:99:0,105,3834	0/0:69,17:20:18.53:0,19,401	0/0:59,0:32:75.26:0,75,2809	0/0:22,0:14:29.96:0,30,837	0/1:43,3:27:60.51:61,0,757	0/1:33,3:16:21.37:21,0,850	0/0:49,6:16:8.70:0,9,216	0/0:41,0:32:71.26:0,71,2332	0/0:45,0:34:84.22:0,84,3252	0/0:34,0:28:50.79:0,51,2265	./.	0/0:34,0:20:54.19:0,54,2220	0/0:31,0:20:39.07:0,39,1526	0/0:135,0:103:99:0,256,9105	0/0:17,0:5:9:0,9,279	0/0:18,0:11:17.09:0,17,651	0/0:48,0:28:72.03:0,72,2712	0/0:34,0:27:63.05:0,63,1911	0/0:44,0:31:84.23:0,84,3308	0/0:20,0:15:13.67:0,14,1163	0/0:4,0:3:9.03:0,9,286
chr10	79019130	.	C	CAT	288.19	PASS	AB=0.936;AC=6;AF=0.115;AN=52;BaseQRankSum=6.442;DP=1146;FS=1.669;HRun=0;HaplotypeScore=143.1477;InbreedingCoeff=0.0560;MQ=47.43;MQ0=215;MQRankSum=-4.658;QD=1.10;ReadPosRankSum=-0.136;VQSLOD=2.3206;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/1:11,0:7:1.98:2,0,184	0/0:53,0:27:46.35:0,46,752	0/0:83,0:41:68.86:0,69,718	0/0:15,0:10:21.03:0,21,292	1/1:35,5:7:1.78:5,2,0	0/1:71,2:20:98.91:99,0,114	0/0:51,0:39:99:0,111,1419	0/1:71,14:19:21.91:238,0,22	0/0:57,0:33:61.40:0,61,1008	0/0:22,0:14:21.07:0,21,309	0/0:41,4:26:11.18:0,11,290	0/0:35,1:16:3.06:0,3,272	0/1:47,5:17:47.94:48,0,76	0/0:41,0:32:51.17:0,51,774	0/0:43,0:34:58.48:0,58,1064	0/0:33,0:27:59.74:0,60,786	./.	0/0:39,0:23:56.77:0,57,814	0/0:29,0:19:36.07:0,36,521	0/0:139,0:105:99:0,229,3181	0/0:16,0:4:6.02:0,6,91	0/0:18,0:11:3.43:0,3,230	0/0:48,0:27:69.01:0,69,1039	0/0:36,0:28:54.04:0,54,715	0/0:43,1:31:86.97:0,87,1146	0/0:19,0:15:10.82:0,11,390	0/0:5,0:4:8.98:0,9,91
chr10	79019131	.	A	ACACC	234.51	PASS	AB=0.973;AC=6;AF=0.111;AN=54;BaseQRankSum=6.023;DP=1157;FS=1.874;HRun=0;HaplotypeScore=165.9814;InbreedingCoeff=0.2010;MQ=49.61;MQ0=209;MQRankSum=-2.395;QD=1.39;ReadPosRankSum=-1.410;VQSLOD=2.6846;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:2:0:0,0,0	0/0:12,0:8:14.62:0,15,245	0/0:53,0:27:14.24:0,14,731	0/0:88,0:46:41.54:0,42,871	0/0:16,0:10:21.07:0,21,386	1/1:38,0:6:2.96:52,3,0	0/0:71,0:21:11.48:0,11,169	0/0:53,0:41:99:0,111,1694	0/0:85,0:19:1.41:0,1,67	0/0:57,0:33:80.23:0,80,1305	0/0:22,0:14:21.07:0,21,379	0/1:42,4:26:99:125,0,399	0/1:35,1:16:99:137,0,373	0/0:51,0:16:7.26:0,7,110	0/0:43,0:34:55.07:0,55,1020	0/1:42,0:34:30.75:31,0,1277	0/0:34,0:28:48.46:0,48,957	./.	0/0:41,0:23:57.13:0,57,1011	0/0:26,0:17:36.07:0,36,642	0/0:142,0:107:99:0,234,3941	0/0:16,0:4:6.01:0,6,113	0/0:16,0:10:18.06:0,18,318	0/0:49,0:28:69.24:0,69,1287	0/0:36,0:28:57.19:0,57,968	0/0:44,0:31:86.92:0,87,1397	0/0:19,0:15:24.70:0,25,506	0/0:5,0:4:11.98:0,12,127
chr10	79019247	.	CAG	C	31.28	PASS	AB=0.992;AC=4;AF=0.087;AN=46;BaseQRankSum=5.244;DP=2179;DS;FS=19.598;HRun=0;HaplotypeScore=135.8416;InbreedingCoeff=0.1932;MQ=20.35;MQ0=1003;MQRankSum=-4.114;QD=0.11;ReadPosRankSum=1.798;VQSLOD=1.3230;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:17:9.03:0,9,179	1/1:18,0:7:2.99:28,3,0	./.	./.	./.	0/0:52,0:21:18.06:0,18,363	0/1:107,1:35:9.60:10,0,243	0/0:36,0:9:25.99:0,26,328	0/0:118,0:50:15.48:0,15,981	0/0:145,0:24:69:0,69,1007	./.	0/0:193,0:52:39.89:0,40,1487	0/1:145,1:45:89.60:90,0,581	0/0:204,0:57:34.20:0,34,1378	0/0:71,0:18:24.02:0,24,403	0/0:67,0:12:24.04:0,24,443	0/0:81,0:53:79.51:0,80,1557	0/0:46,0:25:39.81:0,40,708	0/0:34,0:7:17.04:0,17,218	0/0:53,1:13:5.80:0,6,80	0/0:234,0:146:99:0,218,4391	0/0:41,1:11:3.01:0,3,54	0/0:23,1:9:3.01:0,3,60	0/0:118,0:67:68.81:0,69,1341	./.	0/0:78,0:12:35.99:0,36,492	0/0:48,0:9:11.96:0,12,243	0/0:15,1:5:9.01:0,9,144
chr10	79019291	.	AACCTGGCTTCACCTG	A	488.83	PASS	AB=0.982;AC=5;AF=0.125;AN=40;BaseQRankSum=3.126;DP=2293;DS;FS=32.964;HRun=0;HaplotypeScore=145.1447;InbreedingCoeff=0.0281;MQ=14.80;MQ0=1241;MQRankSum=-0.033;QD=1.09;ReadPosRankSum=-0.135;VQSLOD=0.8724;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:8:7.16:7,0,141	./.	./.	./.	./.	0/0:67,1:17:15.04:0,15,444	0/0:162,0:33:17.66:0,18,369	0/0:50,0:10:30.10:0,30,1090	0/1:171,6:41:99:363,0,1088	0/0:126,0:14:40.38:0,40,2556	./.	0/1:211,5:35:99:208,0,916	0/0:144,0:28:41.12:0,41,1632	0/0:237,1:48:40.13:0,40,1273	0/0:76,0:26:27.60:0,28,1726	0/0:85,0:19:29.53:0,30,1066	0/0:67,0:30:9.03:0,9,320	0/0:39,0:11:5.51:0,6,350	0/0:49,0:13:39.11:0,39,1573	./.	0/0:217,0:98:52.80:0,53,1595	0/0:42,0:7:3.01:0,3,41	./.	0/0:103,0:37:18.40:0,18,502	0/0:40,0:8:5.95:0,6,195	0/0:80,0:14:42.08:0,42,1983	1/1:37,0:4:0.17:0,0,0	./.
chr10	79019372	.	G	GCA	143.60	PASS	AB=0.982;AC=8;AF=0.167;AN=48;BaseQRankSum=3.746;DP=1588;DS;FS=3.933;HRun=0;HaplotypeScore=89.6034;InbreedingCoeff=-0.0850;MQ=16.50;MQ0=630;MQRankSum=-1.586;QD=0.31;ReadPosRankSum=-0.559;VQSLOD=1.0684;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:2:3.01:0,3,39	./.	0/0:17,0:1:3.01:0,3,45	0/0:11,0:1:3:0,3,25	0/0:14,0:2:3.01:0,3,39	0/0:91,0:17:15.01:0,15,174	0/0:236,3:54:51.17:0,51,655	./.	0/0:217,3:49:21.13:0,21,441	0/1:44,2:10:13.85:65,0,14	0/0:23,1:5:3.01:0,3,39	0/1:126,1:27:29.12:29,0,255	0/1:81,3:27:53.32:53,0,240	0/1:147,3:31:18.65:19,0,176	0/0:38,0:15:11.93:0,12,131	0/0:51,1:18:17.95:0,18,208	0/0:30,1:13:15.05:0,15,193	0/0:22,0:12:21.07:0,21,270	./.	1/1:15,0:1:3.01:38,3,0	0/0:104,0:27:39.11:0,39,487	0/0:40,1:9:9.03:0,9,107	0/1:21,0:6:32.46:32,0,66	0/0:77,1:44:53.91:0,54,692	0/1:24,0:5:29.45:29,0,50	0/0:42,0:6:12.04:0,12,154	./.	0/0:4,0:3:3.01:0,3,39
chr10	79019378	.	A	ACT	330.22	PASS	AB=0.940;AC=10;AF=0.185;AN=54;BaseQRankSum=3.403;DP=1511;DS;FS=3.647;HRun=0;HaplotypeScore=86.3280;InbreedingCoeff=-0.0098;MQ=16.96;MQ0=531;MQRankSum=-2.168;QD=0.71;ReadPosRankSum=-0.682;VQSLOD=1.6766;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:2:3.01:0,3,45	./.	0/0:12,0:1:3.01:0,3,52	0/0:8,0:1:3:0,3,26	0/0:10,0:2:3.01:0,3,46	0/0:91,0:18:18.04:0,18,243	0/0:214,0:45:51.17:0,51,773	1/1:18,0:1:2.98:21,3,0	0/0:227,0:49:42.51:0,43,585	0/1:37,2:7:55.23:103,0,55	0/0:21,3:5:3.01:0,3,46	0/1:116,9:27:66.17:66,0,335	0/1:69,7:25:85.19:85,0,309	0/1:139,12:34:36.31:36,0,226	0/0:32,3:11:12.04:0,12,165	0/0:38,3:13:21.02:0,21,276	0/0:33,0:17:17.99:0,18,246	0/0:20,1:12:24.05:0,24,342	0/0:20,1:1:2.97:0,3,20	1/1:11,1:2:3.01:57,3,0	0/0:104,0:32:42.10:0,42,615	0/0:40,0:10:9.03:0,9,135	0/1:19,1:6:45.55:46,0,82	0/0:81,3:48:54.18:0,54,823	0/1:24,1:7:48.37:48,0,80	0/0:38,1:7:17.99:0,18,225	0/0:16,3:3:2.98:0,3,21	0/0:4,0:3:3.01:0,3,46
chr10	79019414	.	CACTCAT	C	88.16	PASS	AB=0.963;AC=7;AF=0.130;AN=54;BaseQRankSum=3.788;DP=2016;DS;FS=1.383;HRun=0;HaplotypeScore=194.1970;InbreedingCoeff=0.0477;MQ=24.03;MQ0=395;MQRankSum=-1.651;QD=0.18;ReadPosRankSum=-3.653;VQSLOD=2.0471;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:5:15.05:0,15,538	0/0:3,0:3:6.02:0,6,216	1/1:38,0:2:2.99:24,3,0	./.	0/0:12,3:8:6.02:0,6,213	0/1:130,4:63:35.43:35,0,3456	0/0:249,1:112:99:0,129,4542	0/0:26,0:6:6.02:0,6,148	0/1:244,6:88:44.32:44,0,3926	0/0:37,0:17:42.14:0,42,1453	0/1:27,1:13:47.73:48,0,584	0/0:189,7:86:99:0,157,5516	0/0:134,1:75:99:0,147,5199	0/0:196,2:81:99:0,123,4358	0/0:41,0:20:36.11:0,36,1120	0/0:31,0:21:51.18:0,51,1791	0/0:64,0:47:72.25:0,72,2586	0/0:35,0:30:60.21:0,60,2121	0/0:25,0:5:15.05:0,15,479	0/0:18,1:14:24.08:0,24,862	0/0:148,0:80:99:0,153,5295	0/0:36,2:22:36.12:0,36,1208	0/0:26,0:17:28.65:0,29,974	0/0:131,0:92:99:0,141,4761	0/1:20,1:17:40.98:41,0,835	0/0:54,0:35:99:0,99,3298	0/1:17,1:9:20.80:21,0,521	0/0:10,0:6:9.03:0,9,324
chr10	79019617	.	GCA	G	233.11	PASS	AB=0.980;AC=15;AF=0.417;AN=36;BaseQRankSum=2.165;DP=2920;DS;FS=10.731;HRun=0;HaplotypeScore=230.6268;InbreedingCoeff=0.0974;MQ=21.58;MQ0=946;MQRankSum=-1.316;QD=0.17;ReadPosRankSum=2.182;VQSLOD=1.3514;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:46,0:18:2.82:14,3,0	0/0:83,0:4:0.75:0,1,1	./.	./.	0/1:174,1:93:18.27:29,0,18	0/1:245,1:161:14.77:15,0,207	./.	0/1:212,5:104:24.04:126,0,24	./.	1/1:67,0:28:0.47:1,0,0	0/1:141,1:67:9.28:48,0,9	1/1:134,0:55:5.68:28,6,0	1/1:175,0:78:10.71:71,11,0	./.	0/0:61,0:20:0:0,0,0	0/0:85,0:51:3:0,3,45	0/0:78,0:49:2.97:0,3,20	./.	./.	0/0:177,0:65:8.53:0,9,73	./.	./.	0/1:119,1:81:9.42:9,0,240	0/0:94,0:34:0:0,0,0	0/0:138,0:56:12.01:0,12,144	1/1:47,0:18:1.25:3,1,0	0/0:31,0:13:6.02:0,6,77
chr10	79019758	.	GCA	G	4046.30	PASS	AB=0.795;AC=29;AF=0.537;AN=54;BaseQRankSum=-5.613;DP=1868;DS;FS=3.063;HRun=0;HaplotypeScore=217.6795;InbreedingCoeff=-0.4612;MQ=22.61;MQ0=418;MQRankSum=-0.994;QD=2.31;ReadPosRankSum=2.517;VQSLOD=2.5254;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,5:9:5.94:77,6,0	0/0:7,3:2:2.99:0,3,24	0/0:31,0:1:3.01:0,3,50	0/0:43,0:8:2.30:0,2,39	0/0:15,3:6:7.80:0,8,53	0/1:98,36:80:94.38:442,0,94	0/1:136,55:91:99:497,0,176	0/1:22,6:5:45.71:65,0,46	0/1:154,61:96:99:319,0,209	0/1:42,6:14:34.98:139,0,35	0/1:10,7:7:41.37:68,0,41	0/1:91,36:51:61.26:236,0,61	0/1:115,41:88:99:308,0,246	0/1:112,41:65:99:224,0,130	1/1:36,16:17:2.88:38,3,0	1/1:34,13:23:8.90:115,9,0	0/1:39,23:40:7.04:350,0,7	1/1:32,22:27:0.63:282,1,0	0/1:31,3:5:26.57:27,0,59	./.	0/1:74,30:48:59.75:279,0,60	0/1:26,10:19:17.01:32,0,17	1/1:9,2:5:3.01:39,3,0	0/1:70,31:57:62:165,0,62	1/1:12,5:7:6.02:77,6,0	0/1:49,8:26:99:142,0,184	0/1:20,10:13:58.90:59,0,72	0/1:17,8:18:64.35:65,0,64
chr10	79019764	.	A	ACT	1682.22	PASS	AB=0.931;AC=18;AF=0.321;AN=56;BaseQRankSum=-1.833;DP=1969;DS;FS=9.317;HRun=0;HaplotypeScore=202.2497;InbreedingCoeff=-0.2495;MQ=20.20;MQ0=549;MQRankSum=-3.351;QD=1.10;ReadPosRankSum=2.294;VQSLOD=1.9142;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:7:17.20:17,0,27	1/1:17,2:4:2.96:19,3,0	0/0:27,0:1:3.01:0,3,46	0/0:29,0:4:5.48:0,5,31	1/1:21,1:6:8.92:70,9,0	0/1:142,8:79:99:151,0,174	0/1:189,7:76:99:439,0,278	0/1:19,1:4:19.62:20,0,25	0/1:229,11:102:99:308,0,245	0/0:73,4:15:26.31:0,26,205	0/0:18,1:8:8.88:0,9,81	0/1:128,6:48:36.19:36,0,146	0/1:147,8:81:99:392,0,283	0/1:145,9:55:99:108,0,107	0/0:49,5:17:2.94:0,3,18	0/0:42,4:19:9.29:0,9,55	0/0:47,3:25:18.79:0,19,206	0/0:47,4:23:29.45:0,29,220	0/1:27,0:5:6.58:37,0,7	0/0:19,0:6:2.97:0,3,20	0/1:95,19:46:17.88:18,0,281	0/1:45,2:16:11.89:14,0,12	0/0:16,2:4:2.94:0,3,18	0/1:92,4:48:4.96:5,0,154	0/0:24,1:6:5.88:0,6,36	0/1:66,0:25:41.69:42,0,277	0/1:20,10:13:46.51:164,0,47	0/0:23,1:15:17.80:0,18,123
chr10	79019797	.	ACACACT	A	471.79	PASS	AB=0.932;AC=10;AF=0.208;AN=48;BaseQRankSum=2.296;DP=1918;DS;FS=6.971;HRun=0;HaplotypeScore=153.3744;InbreedingCoeff=0.0961;MQ=14.60;MQ0=801;MQRankSum=1.649;QD=1.05;ReadPosRankSum=-3.843;VQSLOD=0.8005;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:6,0:1:3.01:0,3,74	./.	0/0:29,0:3:0:0,0,0	0/1:145,2:57:15.04:15,0,1503	0/0:248,2:92:96.46:0,96,5002	0/0:45,0:9:18.06:0,18,575	0/0:234,16:94:77.39:0,77,2403	0/0:99,0:11:15.05:0,15,484	1/1:23,0:6:3.01:39,3,0	0/0:148,5:59:62.75:0,63,1918	0/0:105,0:37:56.68:0,57,1477	0/0:148,6:53:38.06:0,38,1047	0/0:51,2:12:3.01:0,3,82	0/0:41,1:6:3.01:0,3,104	0/1:23,3:8:59.10:59,0,191	0/1:23,2:6:60.05:60,0,130	0/0:35,0:2:3.01:0,3,105	0/1:28,0:5:0.45:0,0,99	0/1:103,15:33:37.51:327,0,38	./.	1/1:29,0:4:3:28,3,0	0/1:47,6:16:0.46:65,0,0	0/0:34,0:4:3.01:0,3,103	0/0:85,0:16:42.14:0,42,1335	0/0:33,1:10:2.85:0,3,86	0/0:12,0:3:3.01:0,3,105
chr10	79019831	.	TGC	T	32.30	PASS	AB=0.986;AC=11;AF=0.250;AN=44;BaseQRankSum=-2.060;DP=1702;DS;FS=2.228;HRun=0;HaplotypeScore=146.8639;InbreedingCoeff=0.0896;MQ=14.31;MQ0=849;MQRankSum=-0.225;QD=0.05;ReadPosRankSum=1.643;VQSLOD=2.8485;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:4:6.02:0,6,103	0/1:9,0:2:0:0,0,0	./.	./.	./.	0/0:109,0:48:25.57:0,26,288	0/0:250,0:82:64.77:0,65,701	0/0:29,0:1:2.97:0,3,20	0/1:238,0:87:0.16:0,0,474	0/1:76,0:9:5.92:6,0,127	0/1:16,0:2:0:0,0,0	0/1:111,5:47:44.59:45,0,295	0/1:84,2:33:46.99:47,0,171	0/1:122,4:42:24.71:25,0,169	0/0:53,0:10:1.55:0,2,4	0/0:40,0:5:7.84:0,8,119	0/0:32,0:15:26.13:0,26,381	0/0:29,0:9:3.78:0,4,251	./.	1/1:28,0:4:1.25:3,1,0	0/0:131,0:15:8.12:0,8,126	0/0:24,0:3:2.90:0,3,16	./.	0/0:75,1:26:24.54:0,25,518	1/1:19,0:3:2.50:9,2,0	0/0:43,0:7:11.88:0,12,83	0/0:32,0:9:2.98:0,3,61	./.
chr10	79019832	.	GCACACTCA	G	5301.08	PASS	AB=0.925;AC=25;AF=0.543;AN=46;BaseQRankSum=-7.981;DP=1688;DS;FS=21.685;HRun=0;HaplotypeScore=149.0545;InbreedingCoeff=-0.3455;MQ=14.31;MQ0=842;MQRankSum=0.945;QD=3.52;ReadPosRankSum=2.730;VQSLOD=2.3445;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:4:6.02:0,6,191	0/0:9,0:2:0:0,0,0	./.	./.	./.	0/1:92,17:47:99:693,0,385	0/1:225,24:82:99:1378,0,816	1/1:28,0:1:2.97:20,3,0	0/1:211,22:88:99:543,0,806	0/1:76,2:10:21.91:22,0,250	0/1:17,0:2:0:0,0,0	0/1:94,18:46:99:700,0,596	0/1:68,12:31:99:691,0,305	0/1:106,20:42:99:665,0,248	1/1:50,2:10:3.01:83,3,0	0/1:36,3:5:74.02:74,0,190	0/1:27,2:14:99:128,0,611	0/1:30,1:9:62.01:62,0,468	./.	1/1:29,0:4:2.49:6,2,0	0/1:125,3:14:62.71:63,0,197	1/1:23,1:3:3.01:64,3,0	1/1:18,0:4:1.55:4,2,0	0/1:68,4:26:63.19:63,0,873	0/0:18,0:3:3.01:0,3,41	1/1:40,0:7:5.93:40,6,0	0/0:30,2:9:2.55:0,3,131	./.
chr10	79019834	.	ACACT	A	2011.22	PASS	AB=0.989;AC=23;AF=0.523;AN=44;BaseQRankSum=-2.908;DP=1633;DS;FS=22.332;HRun=0;HaplotypeScore=143.6210;InbreedingCoeff=-0.2533;MQ=14.25;MQ0=834;MQRankSum=-0.542;QD=1.61;ReadPosRankSum=2.566;VQSLOD=0.8471;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:4:6.01:0,6,108	0/0:9,1:2:0:0,0,0	./.	./.	./.	0/1:100,2:44:99:316,0,113	0/1:235,6:80:99:637,0,338	1/1:28,0:1:2.97:20,3,0	0/1:218,9:87:99:183,0,411	0/1:77,0:10:33.19:33,0,159	0/1:19,0:2:0:0,0,0	0/1:100,3:45:99:276,0,197	0/1:75,0:29:43.39:285,0,43	0/1:120,2:39:89.74:228,0,90	1/1:50,0:10:3.01:31,3,0	0/1:38,0:5:21.49:21,0,120	0/1:31,0:13:23.27:23,0,343	0/1:32,0:9:10.93:11,0,206	./.	1/1:28,0:4:2.13:5,2,0	0/0:132,0:13:3.72:0,4,101	1/1:23,0:3:2.96:19,3,0	./.	0/0:76,0:26:0.01:0,0,455	1/1:18,0:3:2.04:6,2,0	1/1:34,0:4:5.93:40,6,0	0/0:30,0:8:2.98:0,3,80	./.
chr10	79019836	.	ACT	A	1737.78	PASS	AB=0.929;AC=25;AF=0.568;AN=44;BaseQRankSum=-2.545;DP=1581;DS;FS=20.210;HRun=0;HaplotypeScore=137.4443;InbreedingCoeff=-0.1389;MQ=14.31;MQ0=817;MQRankSum=-1.288;QD=1.32;ReadPosRankSum=1.101;VQSLOD=0.8346;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:4:5.05:0,5,63	0/1:10,0:2:0:0,0,0	./.	./.	./.	0/1:80,17:41:40.55:246,0,41	0/1:201,15:78:99:435,0,116	1/1:27,0:1:2.97:20,3,0	0/1:175,45:85:99:187,0,180	0/1:77,1:9:67.71:68,0,97	0/1:16,0:2:0:0,0,0	0/1:84,17:45:99:230,0,116	1/1:59,15:30:12.64:301,13,0	0/1:103,20:39:47.35:194,0,47	1/1:40,8:9:2.92:17,3,0	0/1:39,0:6:7.60:8,0,79	0/0:30,1:13:0.76:0,1,175	0/1:30,1:9:45.06:45,0,81	./.	1/1:26,2:4:1.25:3,1,0	0/1:131,0:11:7.53:8,0,53	1/1:23,0:3:2.94:18,3,0	./.	0/0:74,2:27:7.59:0,8,226	1/1:15,2:3:3.01:45,3,0	1/1:26,1:4:5.93:40,6,0	0/0:26,3:8:2.98:0,3,57	./.
chr10	79019838	.	T	TCA	1622.96	PASS	AB=0.889;AC=14;AF=0.350;AN=40;BaseQRankSum=-1.330;DP=1564;DS;FS=13.075;HRun=0;HaplotypeScore=146.7405;InbreedingCoeff=-0.2732;MQ=14.50;MQ0=817;MQRankSum=0.036;QD=1.38;ReadPosRankSum=-1.351;VQSLOD=1.3439;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:4:6.01:0,6,65	0/1:10,0:2:0:0,0,0	./.	./.	./.	0/1:86,7:39:82.89:121,0,83	0/1:178,30:79:99:196,0,215	./.	0/1:193,22:86:57.76:298,0,58	0/0:77,4:8:8.67:0,9,85	./.	0/1:94,7:47:99:105,0,156	0/1:68,4:30:91.21:91,0,91	0/1:113,7:40:20.34:20,0,113	0/0:46,0:9:2.84:0,3,14	0/1:38,1:7:40.99:41,0,43	0/1:19,11:14:66.31:207,0,66	0/1:19,7:7:4.64:192,0,5	./.	0/0:28,0:4:0.89:0,1,2	1/1:117,8:12:9.02:120,9,0	0/0:20,0:3:0:0,0,0	./.	0/1:58,16:29:45.69:348,0,46	0/0:17,0:3:2.68:0,3,11	0/1:27,2:5:0:0,0,0	0/0:29,0:8:2.84:0,3,38	./.
chr10	79019947	.	ACACACT	A	3376.04	PASS	AB=0.931;AC=21;AF=0.438;AN=48;BaseQRankSum=4.148;DP=2278;DS;FS=5.175;HRun=0;HaplotypeScore=161.9358;InbreedingCoeff=-0.2224;MQ=14.05;MQ0=1258;MQRankSum=1.890;QD=2.11;ReadPosRankSum=-2.956;VQSLOD=1.1496;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,2:4:3.01:0,3,102	./.	./.	./.	1/1:65,3:11:4.46:16,4,0	0/1:107,10:47:99:368,0,869	0/1:165,24:81:99:901,0,1822	0/0:39,0:1:3.01:0,3,48	0/1:221,19:108:99:257,0,4158	0/0:137,3:10:14.94:0,15,432	1/1:51,5:7:3.01:69,3,0	0/1:154,7:62:99:241,0,2525	0/1:99,7:44:99:268,0,1072	0/1:148,19:73:99:536,0,3376	0/1:62,2:14:57.01:57,0,301	0/0:51,0:11:15.05:0,15,502	0/0:42,1:3:3.01:0,3,102	0/1:33,4:9:99:123,0,292	0/0:38,0:4:3.01:0,3,105	1/1:74,0:9:1.25:3,1,0	0/0:205,0:11:12.04:0,12,356	0/0:70,1:20:2.63:0,3,200	1/1:38,1:9:3.01:69,3,0	0/1:86,5:23:56.80:57,0,208	1/1:66,1:4:3.01:68,3,0	0/1:82,5:18:99:243,0,627	0/1:36,2:8:99:101,0,385	./.
chr10	79019949	.	ACACT	A	937.19	PASS	AB=0.996;AC=20;AF=0.435;AN=46;BaseQRankSum=6.903;DP=2230;DS;FS=11.517;HRun=0;HaplotypeScore=156.1711;InbreedingCoeff=-0.2930;MQ=14.04;MQ0=1232;MQRankSum=-0.897;QD=0.57;ReadPosRankSum=-1.669;VQSLOD=1.9719;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:4:3.01:0,3,80	./.	./.	./.	1/1:64,0:11:4.46:16,4,0	0/1:111,0:43:99:137,0,666	0/1:181,4:77:99:314,0,1367	0/0:38,0:1:3:0,3,25	0/1:236,0:106:28.58:29,0,3331	0/1:139,0:11:6.05:6,0,319	1/1:51,0:7:2.60:29,3,0	0/1:162,0:63:45.68:46,0,1958	0/1:102,0:42:99:100,0,805	0/1:168,0:72:99:152,0,2730	0/1:63,0:14:18.35:18,0,228	0/0:50,0:11:15.05:0,15,378	0/0:44,0:3:3.01:0,3,80	0/1:36,1:9:45.85:46,0,227	0/0:35,0:4:3.01:0,3,81	./.	0/0:207,0:11:12.04:0,12,297	0/0:66,0:19:3.72:0,4,154	1/1:40,0:10:3.01:30,3,0	0/1:88,0:21:7.17:7,0,234	1/1:65,0:4:3.01:30,3,0	0/1:86,0:18:88.61:89,0,489	0/1:37,0:8:23.78:24,0,304	./.
chr10	79019982	.	GCACACTCA	G	3433.84	PASS	AB=0.941;AC=23;AF=0.639;AN=36;BaseQRankSum=-2.643;DP=1663;DS;FS=26.163;HRun=0;HaplotypeScore=82.0836;InbreedingCoeff=0.0974;MQ=11.07;MQ0=1127;MQRankSum=-0.493;QD=3.47;ReadPosRankSum=0.685;VQSLOD=0.0134;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:3:6.02:0,6,261	1/1:14,1:6:3.01:72,3,0	./.	./.	1/1:26,1:1:3.01:71,3,0	1/1:68,4:9:6.02:111,6,0	0/1:153,3:25:99:275,0,118	./.	0/1:163,34:59:99:1106,0,143	0/0:81,0:2:3.01:0,3,88	0/1:20,0:3:0:0,0,0	0/1:93,14:27:10.13:557,0,10	1/1:62,5:14:3.01:83,3,0	1/1:96,19:40:8.41:882,8,0	0/1:68,1:5:0:0,0,0	./.	./.	1/1:25,2:8:5.99:104,6,0	./.	1/1:27,2:8:4.26:76,4,0	0/0:219,0:11:9.50:0,10,238	0/1:25,3:8:0.51:1,0,30	./.	./.	1/1:21,0:3:2.94:18,3,0	0/1:38,1:3:37.93:77,0,38	./.	./.
chr10	79019986	.	ACT	A	967.79	PASS	AB=0.948;AC=26;AF=0.722;AN=36;BaseQRankSum=0.525;DP=1621;DS;FS=41.631;HRun=0;HaplotypeScore=70.1259;InbreedingCoeff=0.3795;MQ=10.68;MQ0=1124;MQRankSum=1.104;QD=1.03;ReadPosRankSum=0.380;VQSLOD=-0.0845;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:3:6.02:0,6,115	1/1:9,5:6:2.04:6,2,0	./.	./.	1/1:26,0:2:2.60:10,3,0	0/1:62,4:10:1.97:2,0,23	0/1:143,2:18:4.18:113,0,4	./.	1/1:160,31:53:58.92:478,59,0	0/0:75,0:1:3.01:0,3,57	0/1:16,0:2:0:0,0,0	1/1:90,10:25:23.41:134,23,0	1/1:49,9:9:2.52:16,3,0	1/1:102,5:34:20.47:183,20,0	./.	./.	./.	1/1:26,0:8:5.90:38,6,0	./.	1/1:26,1:7:2.22:7,2,0	0/0:226,0:10:8.95:0,9,148	1/1:27,2:8:3.01:45,3,0	./.	0/1:72,3:16:0:0,0,0	1/1:19,0:3:2.37:8,2,0	1/1:41,0:3:5.91:40,6,0	./.	./.
chr10	79020247	.	GCACA	G	157.10	PASS	AB=0.973;AC=5;AF=0.125;AN=40;BaseQRankSum=4.851;DP=1483;FS=4.610;HRun=0;HaplotypeScore=58.7361;InbreedingCoeff=0.0477;MQ=12.77;MQ0=1034;MQRankSum=2.753;QD=0.37;ReadPosRankSum=0.882;VQSLOD=1.0236;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/1:21,0:9:0:0,0,0	./.	./.	0/0:52,0:18:3.01:0,3,79	0/0:40,0:5:6.02:0,6,158	0/1:127,4:13:54.90:226,0,55	0/0:43,0:6:12.04:0,12,294	0/0:93,0:28:0.90:0,1,496	0/0:117,0:35:98.51:0,99,2344	0/0:38,0:5:3.01:0,3,79	0/0:49,0:11:3.01:0,3,79	1/1:30,0:4:1.25:3,1,0	0/0:48,0:13:9.03:0,9,237	0/0:57,0:24:9.03:0,9,237	0/0:47,0:28:12.04:0,12,314	0/0:41,0:6:5.98:0,6,99	0/0:30,0:5:3.01:0,3,79	0/0:43,0:10:29.84:0,30,689	0/0:62,0:11:3.01:0,3,79	0/1:243,0:10:8.39:8,0,149	./.	./.	./.	./.	0/0:45,0:9:24.01:0,24,500	0/0:38,0:23:5.74:0,6,139	./.
chr10	79020251	.	ACACACT	A	440.35	PASS	AB=0.994;AC=7;AF=0.167;AN=42;BaseQRankSum=4.705;DP=1489;FS=1.651;HRun=0;HaplotypeScore=63.0394;InbreedingCoeff=0.0383;MQ=12.85;MQ0=1031;MQRankSum=1.472;QD=0.81;ReadPosRankSum=0.069;VQSLOD=1.3417;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/1:22,0:9:0:0,0,0	./.	./.	0/0:54,0:18:3.01:0,3,105	0/0:38,0:5:6.02:0,6,209	0/1:134,3:13:79.86:456,0,80	0/0:46,0:7:15.05:0,15,452	0/1:93,1:28:41.83:42,0,595	0/0:117,0:36:99:0,102,3144	0/0:43,0:8:3.01:0,3,103	0/0:48,1:12:2.51:0,3,102	1/1:28,0:4:1.25:3,1,0	0/0:44,2:13:9.03:0,9,301	0/0:60,0:25:9.03:0,9,311	0/0:49,0:28:12.04:0,12,416	0/0:38,0:5:3.01:0,3,104	0/0:31,0:5:3.01:0,3,105	0/0:43,0:11:30.10:0,30,961	0/0:63,0:11:3.01:0,3,104	0/1:244,0:11:33.13:33,0,198	./.	0/1:17,0:5:0:0,0,0	./.	./.	0/0:46,0:9:18.06:0,18,552	0/0:36,0:22:4.01:0,4,162	./.
chr10	79020257	.	TCA	T	70.76	PASS	AB=0.985;AC=6;AF=0.150;AN=40;BaseQRankSum=4.702;DP=1462;DS;FS=4.588;HRun=0;HaplotypeScore=54.6869;InbreedingCoeff=0.0805;MQ=12.74;MQ0=1016;MQRankSum=2.798;QD=0.17;ReadPosRankSum=-0.577;VQSLOD=1.1696;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:20,0:6:0.47:1,0,0	./.	./.	0/0:54,0:15:3.01:0,3,54	0/0:36,0:6:6.02:0,6,108	0/1:123,4:14:30.58:141,0,31	0/0:42,0:5:15.05:0,15,266	0/0:97,0:30:11.87:0,12,299	0/0:124,0:36:87.27:0,87,1498	0/0:45,0:8:3.01:0,3,54	0/0:42,0:13:3:0,3,54	1/1:27,0:4:1.25:3,1,0	0/0:46,0:14:9.03:0,9,159	0/0:64,0:28:9.03:0,9,161	0/0:49,0:28:12.02:0,12,215	0/0:34,0:4:3.01:0,3,54	0/0:29,0:6:3.01:0,3,54	0/0:44,0:11:30.06:0,30,500	0/0:58,0:10:3.01:0,3,54	0/1:248,0:12:4.45:4,0,99	./.	./.	./.	./.	0/0:40,0:6:18.03:0,18,277	0/0:35,0:21:5.99:0,6,107	./.
chr10	79020410	.	C	CAG	2857.72	PASS	AB=0.809;AC=13;AF=0.232;AN=56;BaseQRankSum=5.763;DP=1423;DS;FS=69.926;HRun=0;HaplotypeScore=175.2118;InbreedingCoeff=0.4424;MQ=52.16;MQ0=82;MQRankSum=-8.252;QD=7.50;ReadPosRankSum=-1.607;VQSLOD=0.4881;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,10:9:12.04:243,12,0	0/0:27,0:23:50.64:0,51,728	0/1:46,0:17:30.15:30,0,435	0/0:55,0:21:29.47:0,29,390	0/0:35,1:33:53.60:0,54,853	1/1:11,10:12:9.40:435,9,0	0/1:65,23:80:99:1037,0,475	0/0:62,0:59:99:0,159,2253	0/1:58,34:67:99:647,0,162	0/0:85,0:70:99:0,191,2720	0/0:26,0:20:42.14:0,42,650	1/1:10,9:11:5.73:120,6,0	1/1:13,8:14:14.60:187,15,0	0/1:16,12:19:22.90:276,0,23	0/0:66,0:65:99:0,158,2386	0/0:55,0:54:99:0,131,2045	0/0:42,0:42:99:0,120,1842	0/0:26,0:26:69.16:0,69,992	0/0:66,0:55:99:0,165,2510	0/0:42,0:40:87.27:0,87,1361	0/0:250,0:245:99:0,657,9979	0/0:26,0:24:51.16:0,51,789	0/0:16,0:14:24.08:0,24,377	0/0:59,1:59:99:0,165,2539	0/0:45,1:45:74.91:0,75,1110	0/1:24,2:24:52.09:52,0,915	0/0:45,0:42:99:0,105,1470	0/0:5,0:4:12.04:0,12,195
chr10	79020629	.	AC	A	388.93	PASS	AB=0.548;AC=1;AF=0.018;AN=56;BaseQRankSum=3.498;DP=1823;DS;FS=9.931;HRun=1;HaplotypeScore=221.6152;InbreedingCoeff=0.1711;MQ=43.78;MQ0=396;MQRankSum=-1.783;QD=9.72;ReadPosRankSum=-0.898;VQSLOD=0.1159;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,33:29:8.68:463,0,9	0/0:31,0:13:27.09:0,27,426	0/0:23,0:14:35.48:0,35,396	0/0:19,0:11:25.42:0,25,325	0/0:52,0:31:35.64:0,36,543	0/0:68,0:45:76.89:0,77,1223	0/0:183,0:135:99:0,262,4126	0/0:59,0:46:99:0,126,1918	0/0:179,0:128:99:0,220,3487	0/0:132,0:75:99:0,220,3309	0/0:47,0:21:21.06:0,21,327	0/0:56,0:41:72.24:0,72,1142	0/0:36,0:22:39.04:0,39,608	0/0:62,0:42:75.25:0,75,1197	0/0:65,0:59:96.33:0,96,1528	0/0:65,0:58:99:0,135,2091	0/0:39,0:32:78.22:0,78,1207	0/0:31,0:23:51.17:0,51,805	0/0:40,0:24:69.21:0,69,1027	0/0:78,0:35:63.19:0,63,971	0/0:247,0:189:99:0,411,6521	0/0:33,0:19:21.05:0,21,311	0/0:22,0:7:11.95:0,12,151	0/0:53,0:43:72.22:0,72,1125	0/0:47,0:25:57.17:0,57,857	0/0:52,0:32:93.25:0,93,1404	0/0:48,0:38:62.99:0,63,1005	0/0:15,0:8:12.04:0,12,192
chr10	79020913	.	GCA	G	285.65	PASS	AB=0.903;AC=3;AF=0.054;AN=56;BaseQRankSum=6.751;DP=1416;DS;FS=3.058;HRun=0;HaplotypeScore=173.3929;InbreedingCoeff=0.4446;MQ=43.87;MQ0=181;MQRankSum=-4.652;QD=4.84;ReadPosRankSum=-2.955;VQSLOD=2.8354;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,19:22:27.09:359,27,0	0/0:20,0:14:17.74:0,18,284	0/0:25,0:8:12.01:0,12,127	0/0:25,0:4:6.02:0,6,86	0/0:44,1:28:25.30:0,25,386	0/0:35,0:21:27.01:0,27,432	0/0:69,0:49:75.24:0,75,1259	0/0:52,0:25:54.05:0,54,770	0/0:56,0:41:81.24:0,81,1314	0/0:89,2:53:99:0,135,2184	0/0:27,1:19:33.09:0,33,506	0/0:50,0:40:60.03:0,60,988	0/0:33,1:24:38.90:0,39,674	0/0:51,0:40:66.18:0,66,1103	0/0:61,0:55:99:0,99,1681	0/0:60,5:57:34.60:0,35,1766	0/0:39,2:35:90.30:0,90,1510	0/1:25,3:23:31.75:32,0,642	0/0:35,2:18:45.15:0,45,760	0/0:40,2:29:1.03:0,1,559	0/0:236,14:220:99:0,463,7734	0/0:25,0:20:21.06:0,21,336	0/0:21,1:12:18.06:0,18,311	0/0:81,10:86:30.35:0,30,2942	0/0:46,0:38:41.99:0,42,726	0/0:34,0:23:66.18:0,66,1089	0/0:49,1:46:3.37:0,3,1038	0/0:12,0:10:12.51:0,13,209
chr10	79022158	.	G	GCACACA	423.41	PASS	AB=0.980;AC=7;AF=0.140;AN=50;BaseQRankSum=1.489;DP=1485;FS=20.747;HRun=0;HaplotypeScore=134.6389;InbreedingCoeff=-0.0479;MQ=21.09;MQ0=500;MQRankSum=-3.183;QD=1.00;ReadPosRankSum=-2.073;VQSLOD=0.9400;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:9,0:2:3.01:0,3,67	./.	./.	0/0:21,0:8:6.02:0,6,133	0/0:23,0:13:6.02:0,6,133	0/1:39,1:13:93.15:93,0,95	0/0:48,0:6:12.04:0,12,266	0/0:67,0:34:27.09:0,27,559	0/0:77,0:14:33.11:0,33,732	0/0:22,0:8:21.07:0,21,445	0/1:129,2:59:99:215,0,1260	0/0:112,0:52:54.02:0,54,1165	0/1:156,1:71:99:101,0,2004	0/1:54,1:34:69.34:69,0,592	0/0:41,0:28:38.38:0,38,843	0/0:50,0:36:33.11:0,33,732	0/0:41,0:27:38.79:0,39,865	0/0:46,0:10:21.06:0,21,426	0/0:27,0:11:11.94:0,12,266	0/0:184,0:95:93.48:0,93,1995	0/0:36,0:10:12.04:0,12,266	0/0:16,0:5:3.01:0,3,67	0/0:66,0:40:57.20:0,57,1251	0/0:26,0:10:21.07:0,21,466	0/1:30,1:16:57.26:57,0,887	0/0:25,0:12:15.05:0,15,326	1/1:9,0:3:0.89:2,1,0
chr10	79022259	.	G	GCACACA	710.05	PASS	AB=0.987;AC=16;AF=0.320;AN=50;BaseQRankSum=4.782;DP=1638;DS;FS=38.323;HRun=0;HaplotypeScore=110.9833;InbreedingCoeff=-0.3077;MQ=18.41;MQ0=797;MQRankSum=-2.423;QD=0.71;ReadPosRankSum=-2.423;VQSLOD=-0.1490;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:2:2.79:0,3,66	0/1:17,0:7:60.51:80,0,61	0/0:41,0:2:3.01:0,3,60	0/0:34,0:2:3.01:0,3,37	1/1:33,1:12:0.46:1,0,0	0/0:27,0:6:6.02:0,6,131	0/1:75,0:18:34.13:34,0,60	./.	0/1:44,0:14:0.14:1,0,0	0/1:61,0:13:99:152,0,310	./.	0/1:162,1:59:69.13:69,0,567	0/1:104,0:37:56.31:56,0,477	0/1:198,1:78:34.26:34,0,769	0/1:53,0:26:92.72:93,0,143	0/1:40,2:15:99:174,0,461	0/0:67,0:35:45.15:0,45,966	0/0:42,0:18:39.13:0,39,845	0/0:35,0:3:9.03:0,9,192	0/1:34,0:9:2.27:2,0,123	0/0:250,0:76:91.37:0,91,1934	./.	0/1:22,0:5:0:0,0,0	0/1:90,1:53:26.96:27,0,1141	0/0:31,0:13:6.02:0,6,133	0/1:32,0:8:78.24:78,0,235	0/1:21,2:5:36.22:36,0,68	0/0:13,0:2:3.01:0,3,67
chr10	79022358	.	GCA	G	134.32	PASS	AB=0.808;AC=7;AF=0.159;AN=44;BaseQRankSum=0.530;DP=706;DS;FS=0.000;HRun=0;HaplotypeScore=76.2438;InbreedingCoeff=0.1371;MQ=23.70;MQ0=222;MQRankSum=0.779;QD=0.79;ReadPosRankSum=-3.326;VQSLOD=-0.1527;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/0:14,1:12:3.01:0,3,49	0/0:18,1:14:12.04:0,12,185	0/0:24,5:22:12.04:0,12,171	./.	0/0:25,1:16:20.94:0,21,329	0/0:52,4:23:11.54:0,12,544	0/0:19,3:9:4.57:0,5,95	0/1:31,6:25:9.65:10,0,365	0/0:39,3:30:27.09:0,27,437	0/0:54,5:40:27.06:0,27,440	0/1:14,8:17:30.71:31,0,43	0/0:19,4:16:6.02:0,6,98	0/0:10,1:8:9.03:0,9,147	0/0:10,1:7:12.04:0,12,196	0/0:17,2:3:3.01:0,3,49	0/0:18,0:11:9.02:0,9,113	0/1:66,17:52:99:160,0,584	1/1:12,0:6:3.48:36,3,0	./.	0/0:25,6:23:18.06:0,18,295	1/1:14,1:5:1.25:3,1,0	0/0:22,0:10:21.07:0,21,335	0/0:11,0:9:15.05:0,15,232	0/0:3,0:2:3.01:0,3,49
chr10	79025060	.	A	AAGCAGC	1405.08	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.769;DP=633;FS=7.042;HRun=0;HaplotypeScore=132.1421;InbreedingCoeff=0.8761;MQ=72.56;MQ0=0;MQRankSum=-6.562;QD=37.98;ReadPosRankSum=-1.145;VQSLOD=2.9486;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,19:37:45.15:1500,45,0	0/0:9,0:9:27.08:0,27,542	0/0:13,0:13:12.27:0,12,222	0/0:11,0:11:6.01:0,6,92	0/0:15,0:15:30.09:0,30,606	0/0:29,0:29:78.24:0,78,1577	0/0:27,0:27:69.23:0,69,1384	0/0:25,0:25:36.12:0,36,723	0/0:28,0:28:72.22:0,72,1423	0/0:20,0:20:45.15:0,45,933	0/0:22,0:22:51.17:0,51,1078	0/0:24,0:24:57.19:0,57,1190	0/0:22,0:22:60.21:0,60,1271	0/0:18,0:18:51.18:0,51,1083	0/0:27,0:27:66.23:0,66,1422	0/0:23,0:23:60.19:0,60,1213	0/0:34,0:34:69.24:0,69,1445	0/0:12,0:12:33.11:0,33,666	0/0:24,0:24:51.17:0,51,986	0/0:22,0:22:60.21:0,60,1291	0/0:35,0:35:78.22:0,78,1535	0/0:22,0:22:51.15:0,51,1057	0/0:24,0:24:54.18:0,54,1054	0/0:27,0:27:66.23:0,66,1378	0/0:12,0:12:27.09:0,27,566	0/0:31,0:30:75.25:0,75,1579	0/0:32,0:32:69.20:0,69,1413	0/0:8,0:8:21.07:0,21,452
chr10	79025568	.	TCA	T	343.71	PASS	AB=0.968;AC=17;AF=0.304;AN=56;BaseQRankSum=4.208;DP=475;FS=16.367;HRun=0;HaplotypeScore=84.3071;InbreedingCoeff=0.2851;MQ=72.76;MQ0=6;MQRankSum=-0.240;QD=1.82;ReadPosRankSum=-0.083;VQSLOD=0.4272;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:13:14.06:67,14,0	0/0:9,0:9:24.08:0,24,357	0/0:39,0:21:9.97:0,10,128	0/1:42,1:27:15.39:15,0,193	0/0:9,0:20:2.87:0,3,46	0/0:24,0:24:14.76:0,15,122	0/0:22,0:22:2.99:0,3,23	0/0:19,0:19:15.04:0,15,205	0/0:12,0:12:5.36:0,5,25	0/0:20,0:20:10.78:0,11,403	0/0:11,0:11:17.09:0,17,235	1/1:4,6:10:6.02:68,6,0	1/1:7,1:8:5.93:52,6,0	1/1:7,3:10:8.74:102,9,0	0/0:12,0:11:21.07:0,21,322	0/0:14,0:14:9.93:0,10,308	0/1:16,0:16:1.22:1,0,382	0/0:21,0:21:38.84:0,39,519	0/0:9,0:9:9.03:0,9,127	0/0:16,0:16:1.69:0,2,414	0/1:18,0:18:20.27:20,0,185	1/1:5,11:16:8.97:102,9,0	0/0:21,0:21:39.12:0,39,559	0/0:17,0:17:5.41:0,5,325	0/1:13,2:14:34.55:35,0,351	0/1:14,1:15:37.16:37,0,242	0/1:11,0:11:5.12:5,0,83	0/1:13,0:13:0.96:1,0,383
chr10	79025600	.	AGTCT	A	390.97	PASS	AB=0.955;AC=11;AF=0.196;AN=56;BaseQRankSum=3.884;DP=506;FS=1.276;HRun=0;HaplotypeScore=101.8666;InbreedingCoeff=0.0848;MQ=56.08;MQ0=22;MQRankSum=1.069;QD=2.06;ReadPosRankSum=0.948;VQSLOD=1.8444;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:11.87:0,12,81	0/0:11,0:11:12.09:0,12,167	0/0:9,0:5:8.39:0,8,45	0/0:20,0:9:15.94:0,16,83	0/0:19,0:19:17.85:0,18,175	1/1:11,0:10:14.38:104,14,0	0/0:9,0:9:0.47:0,0,1	0/0:27,0:25:46.50:0,46,390	0/1:10,0:11:3.63:65,0,4	0/0:21,0:18:29.51:0,30,485	0/0:14,0:14:17.60:0,18,127	0/1:17,0:16:13.80:134,0,14	0/1:22,0:21:7.49:12,0,7	0/1:9,8:17:6.63:86,0,7	0/0:18,0:17:25.03:0,25,176	0/0:19,0:19:37.93:0,38,351	0/0:23,0:22:29.78:0,30,509	0/1:22,0:21:17.82:18,0,144	0/0:11,0:11:24.79:0,25,255	0/0:26,0:25:10.31:0,10,199	0/1:25,0:21:67.63:68,0,86	0/0:14,0:14:8.52:0,9,43	0/1:22,0:22:27.66:28,0,393	0/1:25,0:24:13.63:14,0,517	0/0:24,0:23:28.32:0,28,350	0/0:20,0:19:14.25:0,14,293	0/0:12,0:10:11.56:0,12,145	0/1:18,0:15:10.67:11,0,144
chr10	79025601	.	GTC	G	145.52	PASS	AB=0.933;AC=21;AF=0.404;AN=52;BaseQRankSum=3.572;DP=521;FS=5.579;HRun=0;HaplotypeScore=93.7593;InbreedingCoeff=0.3485;MQ=55.68;MQ0=22;MQRankSum=0.314;QD=0.57;ReadPosRankSum=1.720;VQSLOD=1.1316;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:18:0:0,0,0	0/0:11,0:11:2.68:0,3,18	./.	./.	0/0:20,0:20:17.62:0,18,146	1/1:10,0:10:5.22:28,5,0	0/1:6,0:8:0:0,0,0	0/0:31,0:29:5.85:0,6,36	1/1:7,0:11:8.48:41,8,0	0/0:22,0:19:12.02:0,12,128	0/1:14,0:14:0:0,0,0	1/1:16,1:16:7.72:63,8,0	1/1:22,0:21:0.06:0,0,0	1/1:15,1:17:5.42:56,5,0	1/1:13,6:18:3.01:32,3,0	0/0:23,0:23:23.92:0,24,227	0/1:23,0:22:11.88:12,0,192	1/1:13,0:19:2.51:14,3,0	0/0:12,0:12:8.99:0,9,77	0/0:27,0:26:8.62:0,9,53	0/1:27,0:23:19.53:20,0,35	0/0:15,0:15:3.01:0,3,44	0/1:21,0:21:0.58:1,0,118	0/1:26,0:25:22.39:22,0,280	0/0:24,0:23:11.90:0,12,105	0/0:19,0:18:12.02:0,12,121	0/0:10,0:12:9:0,9,94	0/0:19,0:16:3:0,3,25
chr10	79029498	.	TGC	T	2543.95	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=11.245;DP=626;FS=6.672;HRun=0;HaplotypeScore=74.5401;InbreedingCoeff=0.8212;MQ=73.77;MQ0=1;MQRankSum=-3.186;QD=20.35;ReadPosRankSum=2.506;VQSLOD=3.3253;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,35:38:60.19:763,60,0	0/0:6,0:6:17.85:0,18,172	0/0:12,0:11:3.51:0,4,13	0/1:13,0:13:12.36:25,0,12	0/0:30,0:30:84.17:0,84,1280	1/1:5,20:25:54.17:686,54,0	1/1:5,25:30:51.16:648,51,0	0/0:22,0:21:33.05:0,33,452	1/1:1,17:18:47.98:586,48,0	0/0:27,0:27:66.13:0,66,999	0/0:17,1:18:12.84:0,13,697	0/0:19,1:20:16.08:0,16,806	0/0:16,0:16:39.10:0,39,599	0/0:25,0:25:63.15:0,63,967	0/0:17,0:17:42.10:0,42,669	0/0:17,1:18:10.03:0,10,684	0/0:35,0:35:93.13:0,93,1404	0/0:21,0:21:60.05:0,60,881	0/0:19,0:19:41.99:0,42,546	0/0:30,0:30:69.15:0,69,1084	0/0:33,0:33:81.20:0,81,1221	0/0:25,0:25:69.15:0,69,1079	0/0:21,0:21:54.16:0,54,847	0/0:20,0:20:51.14:0,51,822	0/0:25,0:25:63.18:0,63,992	0/0:26,0:26:69.01:0,69,1056	0/0:19,0:19:51.08:0,51,761	0/0:16,0:16:30.49:0,30,640
chr10	79031785	.	CA	C	115.01	PASS	AB=0.600;AC=5;AF=0.096;AN=52;BaseQRankSum=3.094;DP=586;FS=6.525;HRun=1;HaplotypeScore=47.1335;InbreedingCoeff=0.5962;MQ=48.34;MQ0=109;MQRankSum=-2.889;QD=7.19;ReadPosRankSum=-1.817;VQSLOD=-0.1683;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:3,6:9:34.48:34,0,44	0/0:7,0:6:9.03:0,9,144	0/0:33,0:2:6:0,6,53	./.	0/0:20,0:14:30.57:0,31,480	1/1:0,1:1:3.01:42,3,0	./.	0/0:26,0:7:21.06:0,21,315	1/1:1,5:6:12.03:150,12,0	0/0:24,0:13:30.10:0,30,478	0/0:13,0:10:27.09:0,27,432	0/0:35,0:32:90.28:0,90,1380	0/0:25,0:24:66.66:0,67,1028	0/0:23,0:21:60.20:0,60,959	0/0:28,0:28:81.28:0,81,1294	0/0:28,0:28:84.29:0,84,1341	0/0:35,0:33:99:0,99,1556	0/0:13,0:11:24.08:0,24,376	0/0:18,0:8:24.08:0,24,384	0/0:23,0:19:51.16:0,51,791	0/0:68,0:62:99:0,166,2527	0/0:9,0:8:21.07:0,21,336	0/0:16,0:11:27.09:0,27,432	0/0:25,0:24:72.25:0,72,1147	0/0:15,0:12:33.11:0,33,523	0/0:21,0:17:51.17:0,51,815	0/0:21,0:20:60.20:0,60,959	0/0:8,0:5:9.03:0,9,144
chr10	79031796	.	C	CA	194.57	PASS	AB=0.667;AC=3;AF=0.058;AN=52;BaseQRankSum=0.397;DP=560;FS=0.000;HRun=0;HaplotypeScore=46.6304;InbreedingCoeff=0.4167;MQ=48.62;MQ0=92;MQRankSum=-1.169;QD=12.97;ReadPosRankSum=-2.155;VQSLOD=3.5627;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,1:4:5.69:0,6,53	0/0:6,0:5:9.03:0,9,126	0/0:35,0:2:6.01:0,6,67	0/0:36,0:2:2.01:0,2,6	0/0:21,0:17:36.12:0,36,502	./.	./.	0/0:23,0:10:30.10:0,30,420	1/1:0,3:3:6.02:96,6,0	0/0:25,0:15:42.14:0,42,587	0/0:13,0:10:27.09:0,27,377	0/0:33,0:30:84.27:0,84,1156	0/0:24,0:23:66.22:0,66,921	0/0:24,0:22:63.20:0,63,864	0/0:29,0:29:87.28:0,87,1200	0/0:27,0:27:78.21:0,78,1071	0/0:35,0:34:99:0,99,1381	0/1:6,6:10:59.73:192,0,60	0/0:14,0:7:21.07:0,21,294	0/0:19,0:14:39.13:0,39,542	0/0:65,0:59:99:0,145,2002	0/0:9,0:8:21.06:0,21,279	0/0:16,0:12:27.09:0,27,378	0/0:22,0:21:63.21:0,63,880	0/0:13,0:10:27.05:0,27,355	0/0:21,0:17:48.15:0,48,663	0/0:23,0:22:63.21:0,63,880	0/0:8,0:5:9.03:0,9,126
chr10	79032219	.	C	CTGGAACATCATTGGAACTCAT	24496.10	PASS	AB=0.750;AC=53;AF=0.981;AN=54;BaseQRankSum=-0.914;DP=220;FS=25.105;HRun=0;HaplotypeScore=201.3776;InbreedingCoeff=0.0677;MQ=66.94;MQ0=0;MQRankSum=-3.167;QD=111.35;ReadPosRankSum=1.900;VQSLOD=3.1302;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:10:18.06:1251,18,0	1/1:1,0:1:3.01:97,3,0	1/1:3,1:6:1.91:764,2,0	0/1:4,0:6:6.83:432,0,7	1/1:10,0:9:15.05:315,15,0	1/1:5,0:4:12.04:503,12,0	1/1:13,0:9:24.08:1017,24,0	1/1:5,0:4:9.02:230,9,0	1/1:16,0:14:33.11:2597,33,0	1/1:7,0:5:15.04:951,15,0	1/1:2,0:2:6.02:251,6,0	1/1:14,0:13:39.13:2342,39,0	1/1:17,0:13:36.12:2506,36,0	1/1:11,0:10:21.07:1047,21,0	1/1:15,0:14:36.12:2356,36,0	1/1:12,0:11:27.05:1560,27,0	1/1:6,0:6:9.03:496,9,0	1/1:6,0:6:9.03:530,9,0	1/1:7,0:7:17.99:632,18,0	1/1:2,0:2:3.01:73,3,0	1/1:13,0:13:31.46:1370,31,0	1/1:5,0:5:15.05:748,15,0	1/1:1,0:1:0.47:1,0,0	1/1:6,0:6:3.01:69,3,0	1/1:3,0:2:6.02:115,6,0	1/1:10,0:8:19.60:828,20,0	1/1:10,0:9:18.06:1412,18,0	./.
chr10	79033160	.	T	TAC	2852.64	PASS	AB=0.736;AC=17;AF=0.315;AN=54;BaseQRankSum=-7.396;DP=561;FS=3.393;HRun=0;HaplotypeScore=84.7162;InbreedingCoeff=-0.1622;MQ=59.59;MQ0=7;MQRankSum=0.586;QD=8.89;ReadPosRankSum=-1.202;VQSLOD=3.0216;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:29:14.04:0,14,134	0/1:4,5:9:14.99:200,0,15	0/0:20,0:11:3.01:0,3,32	./.	1/1:12,14:28:27.06:406,27,0	0/1:12,12:28:11.72:249,0,12	0/1:13,8:22:5.96:333,0,6	0/1:31,0:28:17.84:142,0,18	0/1:6,7:13:14.99:207,0,15	0/1:16,6:22:39.07:241,0,39	0/1:18,0:18:15.93:16,0,57	0/0:14,0:15:20.89:0,21,212	0/0:14,0:14:12.03:0,12,132	0/0:17,0:19:29.91:0,30,311	0/1:12,8:21:45.04:204,0,45	0/1:14,13:30:51.38:370,0,51	0/0:28,0:30:53.79:0,54,546	0/0:6,0:9:10.74:0,11,49	1/1:5,0:5:1.36:2,1,0	0/1:17,5:23:21.02:123,0,21	0/1:12,7:21:72.23:105,0,72	0/0:12,0:18:8.84:0,9,71	0/0:18,0:18:27.49:0,27,275	0/0:18,0:18:33.15:0,33,392	0/1:8,12:22:18.01:165,0,18	0/0:13,0:18:14.16:0,14,69	0/1:16,9:25:42.03:246,0,42	0/0:5,0:10:14.20:0,14,70
chr10	79033408	.	ACAT	A	4819.88	PASS	AB=0.990;AC=21;AF=0.375;AN=56;BaseQRankSum=-6.903;DP=662;FS=3.766;HRun=0;HaplotypeScore=249.7024;InbreedingCoeff=0.0089;MQ=64.59;MQ0=0;MQRankSum=-6.507;QD=11.84;ReadPosRankSum=-9.426;VQSLOD=2.3162;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:7,27:34:81.01:1193,81,0	0/0:11,0:11:6.12:0,6,334	0/1:15,0:13:15.73:16,0,210	0/0:21,0:16:5.85:0,6,287	0/1:31,0:31:68.42:68,0,725	1/1:2,14:15:45.10:706,45,0	1/1:6,16:22:65.92:932,66,0	0/1:30,1:31:99:143,0,542	1/1:8,24:32:93.24:1448,93,0	0/1:20,0:20:29.96:30,0,485	0/1:21,0:21:18.73:19,0,558	0/0:21,0:21:12.59:0,13,514	0/1:21,1:22:16.01:16,0,627	0/0:23,0:23:10.99:0,11,643	0/0:30,0:30:5.28:0,5,821	0/0:22,0:22:13.16:0,13,601	0/1:36,0:36:56.26:56,0,828	0/0:12,0:12:33.10:0,33,396	0/1:23,0:22:99:126,0,352	0/1:22,0:22:25.71:26,0,566	0/1:25,0:25:2.77:3,0,709	0/1:24,0:24:2.80:3,0,661	0/0:21,0:21:6.42:0,6,583	0/0:22,0:22:40.26:0,40,723	0/1:18,0:18:5.42:5,0,465	0/0:39,0:39:26.21:0,26,1065	0/0:33,0:33:46.31:0,46,1046	0/1:14,0:14:30.16:30,0,225
chr10	79033442	.	GA	G	3137.63	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.445;DP=725;FS=0.000;HRun=5;HaplotypeScore=264.0365;InbreedingCoeff=0.9997;MQ=64.80;MQ0=0;MQRankSum=-14.015;QD=28.79;ReadPosRankSum=-0.818;VQSLOD=0.2174;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:33:87.19:949,87,0	0/0:14,0:14:39.13:0,39,532	0/0:19,1:19:44.93:0,45,549	0/0:29,0:25:42.85:0,43,612	0/0:33,0:33:96.31:0,96,1294	1/1:0,12:11:33.09:372,33,0	1/1:2,24:26:72.20:802,72,0	0/0:33,0:33:90.26:0,90,1189	1/1:6,32:38:99:1175,108,0	0/0:29,0:29:81.25:0,81,1050	0/0:29,0:29:78.20:0,78,1009	0/0:24,0:24:72.19:0,72,922	0/0:21,0:21:57.17:0,57,750	0/0:26,0:26:66.20:0,66,867	0/0:37,0:37:99:0,105,1405	0/0:25,0:25:75.24:0,75,1008	0/0:28,0:28:81.26:0,81,1090	0/0:13,0:13:39.09:0,39,491	0/0:23,1:24:29.22:0,29,780	0/0:23,0:23:63.21:0,63,860	0/0:30,0:30:87.27:0,87,1168	0/0:26,0:26:72.22:0,72,954	0/0:18,0:18:54.18:0,54,734	0/0:24,0:24:72.24:0,72,983	0/0:20,0:20:60.16:0,60,799	0/0:40,0:40:99:0,114,1499	0/0:36,0:36:99:0,108,1442	0/0:14,0:14:42.14:0,42,574
chr10	79033468	.	G	GT	3698.97	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.923;DP=740;FS=1.826;HRun=2;HaplotypeScore=237.3235;InbreedingCoeff=0.9973;MQ=61.71;MQ0=3;MQRankSum=-10.062;QD=33.94;ReadPosRankSum=-1.834;VQSLOD=2.5319;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:30:78.04:978,78,0	0/0:12,0:12:36.11:0,36,446	0/0:13,0:9:18.05:0,18,217	0/0:25,0:17:30.13:0,30,341	0/0:31,0:31:90.28:0,90,1113	1/1:2,9:11:27.02:358,27,0	1/1:4,22:26:60.12:811,60,0	0/0:37,0:36:87.26:0,87,1066	1/1:3,39:42:99:1552,114,0	0/0:30,0:30:90.28:0,90,1113	0/0:24,0:24:66.09:0,66,804	0/0:25,0:25:75.22:0,75,906	0/0:29,0:29:81.23:0,81,988	0/0:21,0:21:63.20:0,63,780	0/0:31,0:31:90.28:0,90,1115	0/0:23,0:22:66.20:0,66,807	0/0:35,0:35:79.27:0,79,1104	0/0:19,0:19:51.04:0,51,580	0/0:29,0:27:71.53:0,72,782	0/0:26,0:26:75.24:0,75,927	0/0:28,0:28:80.99:0,81,1002	0/0:33,0:33:96.28:0,96,1165	0/0:17,0:17:51.15:0,51,620	0/0:25,0:25:72.23:0,72,892	0/0:25,0:25:66.16:0,66,779	0/0:36,0:36:99:0,102,1251	0/0:35,0:35:99:0,105,1285	0/0:22,0:22:66.21:0,66,816
chr10	79034174	.	ACAG	A	3173.46	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.333;DP=632;FS=0.463;HRun=0;HaplotypeScore=95.2089;InbreedingCoeff=0.9973;MQ=63.45;MQ0=1;MQRankSum=-5.181;QD=36.06;ReadPosRankSum=1.205;VQSLOD=4.1951;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:29:66.10:1009,66,0	0/0:8,0:8:18.06:0,18,406	0/0:26,0:24:66.67:0,67,1435	0/0:26,0:23:69.24:0,69,1505	0/0:17,0:17:45.15:0,45,1012	1/1:2,18:20:57.13:917,57,0	1/1:1,19:19:42.07:640,42,0	0/0:36,0:36:99:0,105,2307	1/1:2,16:18:48.12:768,48,0	0/0:24,0:24:63.21:0,63,1362	0/0:18,0:18:48.16:0,48,1083	0/0:27,0:27:78.27:0,78,1719	0/0:19,0:19:54.19:0,54,1223	0/0:28,0:28:75.24:0,75,1636	0/0:32,0:32:93.32:0,93,2078	0/0:18,0:18:54.19:0,54,1203	0/0:31,0:31:90.27:0,90,1978	0/0:12,0:12:33.04:0,33,652	0/0:22,0:22:66.19:0,66,1349	0/0:31,0:31:87.28:0,87,1926	0/0:33,0:33:93.32:0,93,2092	0/0:12,0:12:36.11:0,36,754	0/0:19,0:19:54.19:0,54,1209	0/0:22,0:22:54.02:0,54,1209	0/0:25,0:25:75.26:0,75,1700	0/0:27,0:27:78.27:0,78,1748	0/0:22,0:22:63.22:0,63,1426	0/0:9,0:9:27.09:0,27,612
chr10	79034227	.	AACACAC	A	2116.36	PASS	AB=0.684;AC=23;AF=0.442;AN=52;BaseQRankSum=2.314;DP=535;FS=3.443;HRun=0;HaplotypeScore=133.1546;InbreedingCoeff=0.7609;MQ=54.95;MQ0=9;MQRankSum=-4.588;QD=10.53;ReadPosRankSum=2.061;VQSLOD=2.3678;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:18.06:0,18,499	1/1:3,2:6:9.03:164,9,0	./.	./.	1/1:9,2:11:6:85,6,0	0/0:30,0:29:19.31:0,19,460	0/0:18,0:17:12.21:0,12,288	1/1:21,3:24:4.82:112,5,0	0/0:22,0:22:10.85:0,11,224	1/1:11,1:12:12.03:193,12,0	1/1:7,1:9:9.02:128,9,0	0/0:27,0:27:9.03:0,9,216	0/0:20,0:21:28.88:0,29,527	0/0:23,0:24:6.02:0,6,147	1/1:14,2:18:18.93:300,19,0	0/1:7,4:13:47.45:309,0,47	0/0:22,0:22:30.10:0,30,708	0/0:7,0:13:13.60:0,14,314	1/1:17,2:19:6.02:122,6,0	1/1:21,3:25:15.05:266,15,0	1/1:25,0:25:5.60:65,6,0	0/0:7,0:9:6.02:0,6,135	0/0:15,0:15:14.29:0,14,457	0/0:24,0:28:24.05:0,24,616	1/1:15,5:21:18.06:346,18,0	0/0:20,0:21:24.97:0,25,562	1/1:8,7:16:11.93:224,12,0	0/0:10,0:10:15.05:0,15,430
chr10	79034267	.	CA	C	898.63	PASS	AB=0.848;AC=10;AF=0.179;AN=56;BaseQRankSum=7.542;DP=611;FS=6.027;HRun=1;HaplotypeScore=97.4148;InbreedingCoeff=0.4519;MQ=53.16;MQ0=31;MQRankSum=-1.685;QD=5.84;ReadPosRankSum=0.093;VQSLOD=0.3958;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,16:22:99:289,0,125	0/0:5,0:5:8.26:0,8,81	0/0:27,0:14:42.12:0,42,510	0/0:33,0:23:59.20:0,59,692	0/0:26,0:26:46.52:0,47,699	0/1:20,0:18:88.40:102,0,88	0/1:13,7:12:12.50:109,0,13	0/0:32,0:31:66.17:0,66,913	1/1:18,3:19:21.35:241,21,0	0/0:19,0:18:41.61:0,42,496	0/0:8,0:8:16.82:0,17,192	1/1:21,1:20:18.51:148,19,0	0/1:23,0:21:86.20:144,0,86	1/1:18,0:15:3.22:18,3,0	0/0:19,0:19:24.42:0,24,418	0/0:24,0:24:31.76:0,32,521	0/0:31,0:30:74.20:0,74,905	0/0:21,0:20:34.03:0,34,350	0/0:16,0:16:43.91:0,44,532	0/0:20,0:20:37.50:0,37,386	0/0:30,0:29:43.36:0,43,704	0/0:10,0:10:20.10:0,20,243	0/0:22,0:22:50.94:0,51,683	0/0:31,0:31:55.87:0,56,738	0/0:22,0:22:41.43:0,41,464	0/0:20,0:19:57.12:0,57,701	0/0:25,0:24:46.91:0,47,526	0/0:16,0:16:48.15:0,48,627
chr10	79034268	.	A	AC	1449.87	PASS	AB=0.734;AC=12;AF=0.214;AN=56;BaseQRankSum=6.092;DP=607;FS=1.973;HRun=1;HaplotypeScore=95.2913;InbreedingCoeff=0.7517;MQ=55.18;MQ0=31;MQRankSum=-2.150;QD=9.48;ReadPosRankSum=0.267;VQSLOD=1.3060;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,4:23:43.51:334,0,44	0/0:5,0:5:14.70:0,15,123	0/0:28,0:15:42.12:0,42,517	0/0:34,0:24:59.38:0,59,699	0/0:26,0:26:58.74:0,59,728	0/1:7,12:18:21.68:221,0,22	1/1:14,6:12:14.17:173,14,0	0/0:33,0:32:80.65:0,81,946	1/1:10,7:18:29.79:313,30,0	0/0:18,0:17:47.83:0,48,543	0/0:9,0:9:20.85:0,21,221	1/1:9,13:20:20.98:250,21,0	1/1:6,14:19:18.17:266,18,0	1/1:5,14:16:6.01:68,6,0	0/0:17,0:17:45.70:0,46,495	0/0:23,1:24:20.94:0,21,586	0/0:29,0:29:69.42:0,69,805	0/0:20,0:19:29.04:0,29,247	0/0:16,0:16:47.94:0,48,566	0/0:21,0:21:47.58:0,48,459	0/0:30,0:29:59.28:0,59,748	0/0:10,0:10:20.98:0,21,247	0/0:22,0:22:35.94:0,36,618	0/0:30,0:30:56.75:0,57,693	0/0:21,0:21:53.53:0,54,552	0/0:19,0:18:46.69:0,47,564	0/0:25,0:24:54.62:0,55,586	0/0:16,0:16:47.92:0,48,554
chr10	79036557	.	GC	G	4508.03	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.509;DP=774;FS=4.553;HRun=1;HaplotypeScore=74.4688;InbreedingCoeff=0.9998;MQ=80.40;MQ0=0;MQRankSum=-2.180;QD=38.53;ReadPosRankSum=1.815;VQSLOD=5.6214;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,47:47:99:1823,132,0	0/0:15,0:15:45.15:0,45,719	0/0:22,0:22:66.22:0,66,1025	0/0:16,0:16:35.15:0,35,541	0/0:26,0:26:78.27:0,78,1245	1/1:0,27:27:72.24:1007,72,0	1/1:0,17:17:45.15:629,45,0	0/0:38,0:38:99:0,114,1798	1/1:0,26:26:75.25:1049,75,0	0/0:35,0:35:99:0,105,1595	0/0:28,0:28:84.29:0,84,1343	0/0:33,0:33:96.30:0,96,1488	0/0:27,0:27:81.28:0,81,1294	0/0:19,0:19:57.19:0,57,909	0/0:38,0:38:99:0,114,1817	0/0:29,0:29:87.30:0,87,1384	0/0:22,0:22:66.18:0,66,1024	0/0:20,0:20:60.20:0,60,954	0/0:24,0:24:69.24:0,69,1096	0/0:49,0:49:99:0,144,2277	0/0:29,0:29:87.30:0,87,1388	0/0:34,0:34:99:0,99,1581	0/0:26,0:26:75.22:0,75,1149	0/0:31,0:31:93.27:0,93,1416	0/0:26,0:26:78.25:0,78,1219	0/0:27,0:27:81.27:0,81,1273	0/0:33,0:33:99:0,99,1558	0/0:10,0:10:30.10:0,30,474
chr10	79038032	.	G	GGACC	10802.44	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-13.553;DP=823;FS=0.352;HRun=0;HaplotypeScore=125.5828;InbreedingCoeff=0.9991;MQ=84.37;MQ0=0;MQRankSum=-3.460;QD=73.49;ReadPosRankSum=3.302;VQSLOD=6.8431;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,45:48:99:3443,120,0	0/0:10,0:10:27.09:0,27,565	0/0:29,0:29:87.30:0,87,1696	0/0:21,0:21:54.06:0,54,1046	0/0:41,0:41:99:0,120,2515	1/1:3,21:25:63.22:1813,63,0	1/1:2,29:33:93.32:2691,93,0	0/0:28,0:28:84.27:0,84,1654	1/1:3,36:41:99:2856,99,0	0/0:39,0:39:99:0,114,2351	0/0:21,0:21:63.22:0,63,1307	0/0:27,0:27:81.28:0,81,1687	0/0:29,0:29:84.29:0,84,1723	0/0:23,0:23:60.21:0,60,1258	0/0:32,0:32:96.33:0,96,2006	0/0:29,0:29:87.28:0,87,1768	0/0:32,0:32:96.32:0,96,1975	0/0:33,0:33:99:0,99,2022	0/0:29,0:29:84.27:0,84,1724	0/0:38,0:38:99:0,111,2262	0/0:37,0:37:99:0,105,2134	0/0:29,0:29:84.29:0,84,1708	0/0:21,0:21:63.19:0,63,1279	0/0:31,0:31:90.29:0,90,1848	0/0:20,0:20:60.16:0,60,1118	0/0:33,0:33:96.33:0,96,1998	0/0:36,0:36:99:0,108,2225	0/0:8,0:8:24.08:0,24,503
chr10	79038776	.	A	AT	1695.30	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-10.479;DP=539;FS=1.689;HRun=9;HaplotypeScore=51.7142;InbreedingCoeff=0.8113;MQ=71.92;MQ0=0;MQRankSum=-0.639;QD=19.49;ReadPosRankSum=1.997;VQSLOD=3.9086;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:27:63.17:697,63,0	0/0:14,0:14:38.99:0,39,339	0/0:14,0:13:0.34:0,0,106	0/1:9,0:9:13.87:14,0,68	0/0:26,0:26:74.97:0,75,647	1/1:2,17:19:39.11:431,39,0	1/1:3,15:18:25.11:384,25,0	0/0:35,0:35:80.91:0,81,693	1/1:2,12:14:30.08:332,30,0	0/0:21,0:21:56.99:0,57,495	0/0:20,0:20:53.45:0,53,444	0/0:23,0:23:59.96:0,60,517	0/0:16,0:16:44.98:0,45,388	0/0:15,0:15:38.99:0,39,338	0/0:17,0:17:50.99:0,51,443	0/0:16,2:18:17.80:0,18,381	0/0:16,0:16:38.96:0,39,334	0/0:17,0:17:44.99:0,45,391	0/0:24,0:24:56.90:0,57,490	0/0:25,0:26:67.39:0,67,561	0/0:10,0:10:23.99:0,24,208	0/0:19,0:19:53.97:0,54,465	0/0:23,0:23:59.98:0,60,521	0/0:7,0:7:18:0,18,156	0/0:21,0:21:56.98:0,57,495	0/0:26,0:26:68.97:0,69,599	0/0:35,0:35:95.92:0,96,826	0/0:9,0:9:23.97:0,24,202
chr10	79040182	.	CGGG	C	5460.47	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.341;DP=578;FS=1.327;HRun=3;HaplotypeScore=83.6082;InbreedingCoeff=0.9441;MQ=82.39;MQ0=0;MQRankSum=-2.863;QD=48.32;ReadPosRankSum=1.951;VQSLOD=4.5445;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,2996	0/0:4,0:4:12.04:0,12,296	0/0:13,0:13:36.12:0,36,828	0/0:20,0:20:54.13:0,54,1233	0/0:19,0:19:51.17:0,51,1224	0/0:13,0:13:39.13:0,39,921	0/0:38,0:38:99:0,111,2686	0/0:16,0:16:48.16:0,48,1153	0/0:21,0:21:63.22:0,63,1491	0/0:23,0:23:69.24:0,69,1699	0/0:7,0:7:18.06:0,18,418	1/1:0,28:28:72.25:1342,72,0	1/1:0,12:12:30.10:554,30,0	1/1:0,27:27:72.25:1319,72,0	0/0:20,0:20:60.21:0,60,1482	0/0:22,0:22:66.23:0,66,1599	0/0:29,0:29:87.26:0,87,2079	1/1:0,26:26:66.23:1231,66,0	0/0:15,0:15:45.15:0,45,1109	0/0:4,0:4:9.03:0,9,220	0/0:62,0:62:99:0,184,4471	0/0:21,0:21:63.22:0,63,1552	0/0:9,0:9:27.09:0,27,657	0/0:32,0:32:96.33:0,96,2302	0/0:22,0:22:66.23:0,66,1529	1/1:0,19:19:54.16:960,54,0	0/0:14,0:14:42.14:0,42,1032	1/1:0,1:1:3.01:56,3,0
chr10	79040828	.	GTT	G	8084.13	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=7.458;DP=688;FS=14.492;HRun=10;HaplotypeScore=112.9525;InbreedingCoeff=0.9696;MQ=57.93;MQ0=18;MQRankSum=1.339;QD=20.62;ReadPosRankSum=1.306;VQSLOD=2.4637;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:31:60.06:577,60,0	1/1:0,6:6:15.04:164,15,0	0/0:43,0:18:36.62:0,37,336	0/0:36,0:11:3.13:0,3,155	1/1:5,27:32:69.04:728,69,0	0/0:3,0:20:40.93:0,41,172	0/0:8,0:25:40.65:0,41,156	1/1:16,23:38:48.18:697,48,0	0/0:0,0:8:19.96:0,20,69	1/1:4,21:25:60.04:637,60,0	1/1:3,31:34:84.22:924,84,0	1/1:4,18:22:39.09:430,39,0	1/1:4,17:21:44.84:469,45,0	1/1:3,10:13:24.05:266,24,0	1/1:1,20:21:42.10:465,42,0	1/1:4,18:21:45.11:497,45,0	0/0:30,0:29:75.20:0,75,1122	0/0:21,0:21:60.09:0,60,871	1/1:11,18:27:42.06:455,42,0	1/1:7,21:27:57.12:628,57,0	1/1:2,13:15:27.01:285,27,0	0/0:18,0:20:48.10:0,48,663	0/0:20,0:20:52.34:0,52,732	0/0:23,0:24:63.21:0,63,970	1/1:7,18:25:13.69:327,14,0	0/0:28,0:29:72.20:0,72,1020	1/1:6,20:25:48.10:534,48,0	0/0:18,0:18:33.08:0,33,473
chr10	79040839	.	CT	C	132.29	PASS	AB=0.905;AC=3;AF=0.054;AN=56;BaseQRankSum=4.115;DP=637;FS=4.751;HRun=10;HaplotypeScore=120.6336;InbreedingCoeff=0.5670;MQ=57.88;MQ0=20;MQRankSum=-1.195;QD=2.41;ReadPosRankSum=0.854;VQSLOD=0.1893;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:34:36.79:225,37,0	0/0:6,0:6:9.02:0,9,88	0/0:33,0:12:0:0,0,0	0/0:32,1:11:5.68:0,6,53	0/0:29,1:30:36.50:0,37,555	0/0:21,0:20:47.88:0,48,395	0/0:26,0:23:34.54:0,35,225	0/0:29,2:29:7.10:0,7,422	0/0:10,0:10:26.93:0,27,227	0/0:22,0:22:44.33:0,44,386	0/0:34,0:34:78:0,78,725	0/0:18,1:19:14.59:0,15,309	0/0:21,0:20:45.51:0,46,430	0/0:11,0:11:23.94:0,24,230	0/0:22,1:23:23.12:0,23,425	0/1:17,2:18:8.25:8,0,312	0/0:32,0:31:71.45:0,71,717	0/0:21,0:21:44.18:0,44,614	0/0:22,0:20:32.65:0,33,309	0/0:24,0:23:50.96:0,51,464	0/0:16,0:16:28.30:0,28,277	0/0:18,0:18:42.11:0,42,458	0/0:22,0:22:42.06:0,42,440	0/0:22,0:23:50.99:0,51,537	0/0:23,0:23:19.48:0,19,308	0/0:24,0:24:57.12:0,57,608	0/0:25,0:23:59.44:0,59,514	0/0:11,0:11:33.07:0,33,349
chr10	79040991	.	G	GA	1519.31	PASS	AB=0.958;AC=8;AF=0.143;AN=56;BaseQRankSum=1.713;DP=562;FS=5.009;HRun=9;HaplotypeScore=103.5914;InbreedingCoeff=0.7979;MQ=73.60;MQ0=0;MQRankSum=-0.583;QD=18.99;ReadPosRankSum=1.418;VQSLOD=3.5790;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:59.96:0,60,517	0/1:10,1:11:0.19:0,0,227	0/0:11,0:11:17.92:0,18,145	0/1:9,0:9:3.56:4,0,38	0/0:25,0:25:68.98:0,69,599	0/0:1,0:22:40.74:0,41,120	0/0:0,0:16:28.52:0,29,84	0/0:36,0:36:80.96:0,81,701	0/0:0,0:10:20.37:0,20,60	0/0:24,0:24:65.95:0,66,568	0/0:18,1:19:20.81:0,21,410	1/1:3,21:24:63.17:697,63,0	1/1:1,17:18:48.13:531,48,0	1/1:4,14:18:39.11:431,39,0	0/0:21,0:21:53.98:0,54,469	0/0:13,0:13:32.99:0,33,287	0/0:21,0:21:32.29:0,32,421	0/0:28,0:27:62.92:0,63,538	0/0:29,0:29:71.97:0,72,624	0/0:27,0:28:67.99:0,68,579	0/0:9,0:9:17.97:0,18,156	0/0:14,0:14:38.98:0,39,338	0/0:29,0:29:71.96:0,72,621	0/0:13,0:13:16.20:0,16,267	0/0:18,0:18:47.98:0,48,417	0/0:30,0:30:77.97:0,78,677	0/0:29,0:29:77.98:0,78,677	0/0:14,0:14:35.99:0,36,312
chr10	79041280	.	C	CT	21521.76	PASS	AB=0.900;AC=39;AF=0.696;AN=56;BaseQRankSum=-15.071;DP=706;FS=11.507;HRun=1;HaplotypeScore=63.6265;InbreedingCoeff=0.9155;MQ=86.95;MQ0=0;MQRankSum=-6.207;QD=40.08;ReadPosRankSum=2.595;VQSLOD=4.8356;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:26:63.21:940,63,0	1/1:0,12:12:33.11:495,33,0	0/0:22,0:21:57.15:0,57,705	0/0:27,0:27:55.95:0,56,687	1/1:0,28:28:81.27:1214,81,0	1/1:1,30:31:81.27:1214,81,0	1/1:0,19:19:57.19:854,57,0	1/1:1,39:40:99:1709,117,0	1/1:1,24:25:66.22:983,66,0	1/1:0,25:25:72.23:1057,72,0	1/1:0,17:17:48.16:715,48,0	1/1:2,35:37:99:1483,99,0	1/1:0,29:29:78.26:1169,78,0	1/1:1,18:19:54.18:809,54,0	1/1:0,37:37:99:1574,105,0	1/1:0,35:34:90.30:1348,90,0	0/0:20,0:20:60.18:0,60,765	0/0:23,0:23:69.22:0,69,895	1/1:1,19:20:60.19:876,60,0	1/1:1,34:35:99:1527,105,0	1/1:1,37:38:99:1583,108,0	0/0:20,0:20:54.18:0,54,701	0/0:17,0:17:42.08:0,42,488	0/0:26,0:26:75.24:0,75,974	1/1:0,15:15:42.14:629,42,0	0/1:16,2:18:41.81:42,0,485	1/1:1,30:31:87.29:1300,87,0	0/0:14,0:14:42.12:0,42,529
chr10	79041644	.	C	CT	10805.02	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-14.073;DP=585;FS=10.626;HRun=9;HaplotypeScore=53.4522;InbreedingCoeff=0.9421;MQ=76.79;MQ0=0;MQRankSum=0.686;QD=25.42;ReadPosRankSum=-0.338;VQSLOD=4.8908;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:28:46.85:0,47,138	1/1:0,13:13:39.11:431,39,0	0/0:13,0:13:8.98:0,9,78	0/1:10,0:10:1.86:2,0,117	1/1:7,23:30:58.23:679,58,0	1/1:1,22:23:66.18:730,66,0	1/1:3,9:12:27.07:299,27,0	1/1:12,24:36:23.07:702,23,0	1/1:1,18:19:48.13:531,48,0	1/1:3,27:30:78.18:844,78,0	1/1:3,15:18:42.03:438,42,0	1/1:2,20:22:60.16:664,60,0	1/1:2,22:24:63.17:697,63,0	1/1:2,15:17:42.11:465,42,0	1/1:4,21:25:51.14:564,51,0	1/1:1,23:24:63.17:697,63,0	0/0:16,0:16:41.99:0,42,365	0/0:18,0:18:50.93:0,51,435	1/1:4,13:17:36.07:387,36,0	1/1:6,35:41:99:1149,105,0	1/1:1,10:11:30.08:332,30,0	0/0:19,0:19:50.47:0,50,426	0/0:17,0:17:47.99:0,48,417	0/0:10,0:10:26.95:0,27,227	1/1:0,21:21:45.12:498,45,0	0/0:21,1:22:23.80:0,24,436	1/1:7,25:32:63.17:695,63,0	0/0:17,0:17:38.99:0,39,339
chr10	79042389	.	C	CAA	23090.72	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-13.652;DP=624;FS=1.123;HRun=2;HaplotypeScore=65.5919;InbreedingCoeff=0.9998;MQ=78.85;MQ0=0;MQRankSum=-1.325;QD=49.23;ReadPosRankSum=1.848;VQSLOD=4.7079;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:17:39.13:731,39,0	1/1:0,16:17:47.88:893,48,0	0/0:18,0:18:48.07:0,48,632	0/0:11,0:12:32.78:0,33,435	1/1:3,31:34:93.32:1719,93,0	1/1:3,25:28:75.26:1405,75,0	1/1:1,15:16:42.14:787,42,0	1/1:2,39:42:99:2242,123,0	1/1:0,23:23:66.23:1237,66,0	1/1:2,25:28:78.26:1430,78,0	1/1:2,22:24:69.16:1205,69,0	1/1:2,26:28:72.25:1349,72,0	1/1:1,23:24:66.23:1231,66,0	1/1:0,20:20:51.17:956,51,0	1/1:0,25:26:72.25:1349,72,0	1/1:1,25:27:72.25:1349,72,0	0/0:21,0:21:60.18:0,60,857	0/0:19,0:19:51.17:0,51,745	1/1:0,20:20:60.19:1086,60,0	1/1:2,26:30:87.15:1462,87,0	1/1:1,10:11:30.06:526,30,0	0/0:17,0:17:51.17:0,51,751	0/0:12,0:12:36.12:0,36,530	0/0:11,0:11:33.11:0,33,485	1/1:0,21:21:51.17:955,51,0	0/0:32,0:32:96.32:0,96,1413	1/1:2,30:33:63.22:1180,63,0	0/0:13,0:13:33.11:0,33,486
chr10	79042645	.	ACCTG	A	1053.87	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.381;DP=500;FS=27.604;HRun=0;HaplotypeScore=103.9957;InbreedingCoeff=0.9920;MQ=75.56;MQ0=0;MQRankSum=-6.873;QD=40.53;ReadPosRankSum=-0.503;VQSLOD=1.7317;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:21.07:0,21,608	0/0:8,0:8:24.08:0,24,695	0/0:8,0:8:21.07:0,21,608	0/0:16,0:16:48.14:0,48,1238	0/0:22,0:22:63.22:0,63,1754	0/0:24,0:24:69.24:0,69,1987	0/0:17,0:17:48.14:0,48,1325	0/0:31,0:31:93.32:0,93,2609	0/0:19,0:19:57.20:0,57,1648	0/0:14,0:14:42.14:0,42,1214	0/0:29,0:29:87.28:0,87,2441	1/1:1,7:8:18.05:285,18,0	1/1:0,9:9:24.08:414,24,0	1/1:1,8:9:27.09:497,27,0	0/0:23,0:23:63.22:0,63,1740	0/0:37,0:37:99:0,108,3072	0/0:23,0:23:69.24:0,69,1999	0/0:22,0:22:63.21:0,63,1674	0/0:15,0:15:45.15:0,45,1273	0/0:27,0:27:81.28:0,81,2346	0/0:9,0:9:27.09:0,27,769	0/0:13,0:13:39.12:0,39,1053	0/0:14,0:14:42.14:0,42,1176	0/0:18,0:18:54.19:0,54,1549	0/0:26,0:26:78.25:0,78,2199	0/0:17,0:17:51.18:0,51,1473	0/0:19,0:18:57.20:0,57,1643	0/0:14,0:14:42.14:0,42,1194
chr10	79042651	.	TC	T	547.96	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.818;DP=491;FS=25.292;HRun=1;HaplotypeScore=76.0812;InbreedingCoeff=0.9918;MQ=75.72;MQ0=0;MQRankSum=-7.047;QD=21.08;ReadPosRankSum=-0.599;VQSLOD=2.1974;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:21.07:0,21,335	0/0:8,0:8:24.08:0,24,384	0/0:10,0:10:30.07:0,30,439	0/0:14,0:14:42.14:0,42,632	0/0:22,0:22:63.21:0,63,1002	0/0:24,0:24:66.21:0,66,1027	0/0:16,0:16:45.15:0,45,719	0/0:29,0:29:87.29:0,87,1368	0/0:19,0:19:57.17:0,57,885	0/0:15,0:15:42.13:0,42,632	0/0:28,0:28:84.28:0,84,1320	1/1:2,7:9:17.03:161,17,0	1/1:0,9:9:23.55:247,24,0	1/1:0,8:8:24.07:281,24,0	0/0:22,0:22:63.20:0,63,971	0/0:38,0:38:99:0,105,1665	0/0:24,0:24:72.24:0,72,1139	0/0:22,0:22:63.21:0,63,984	0/0:16,0:16:48.12:0,48,737	0/0:27,0:27:81.28:0,81,1295	0/0:9,0:9:27.09:0,27,431	0/0:10,0:10:30.10:0,30,480	0/0:12,0:12:36.12:0,36,573	0/0:16,0:16:48.16:0,48,767	0/0:24,0:24:72.23:0,72,1128	0/0:18,0:18:54.18:0,54,864	0/0:19,0:18:57.18:0,57,879	0/0:14,0:14:42.14:0,42,670
chr10	79042730	.	ATAAT	A	374.36	PASS	AB=0.893;AC=9;AF=0.161;AN=56;BaseQRankSum=3.500;DP=373;FS=4.915;HRun=0;HaplotypeScore=65.4952;InbreedingCoeff=-0.1988;MQ=55.00;MQ0=0;MQRankSum=2.589;QD=2.88;ReadPosRankSum=-3.719;VQSLOD=-0.4575;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:13.43:0,13,730	0/1:7,0:7:18.82:19,0,460	0/0:6,0:6:18.06:0,18,392	0/0:4,0:4:9.50:0,10,198	0/0:24,0:23:51.14:0,51,1203	0/0:25,0:25:72.23:0,72,1808	0/1:9,0:9:25.18:25,0,521	0/1:26,15:41:99:320,0,1518	0/0:10,0:10:30.10:0,30,735	0/0:19,0:19:48.16:0,48,1278	0/1:10,0:10:27.43:27,0,540	0/1:9,0:9:30.44:30,0,462	0/0:9,0:9:24.08:0,24,577	0/0:6,0:6:15.05:0,15,376	0/0:11,0:11:33.10:0,33,772	0/1:16,0:16:3.77:4,0,1057	0/0:15,0:15:42.14:0,42,1061	0/0:26,0:26:75.25:0,75,1825	0/1:18,0:18:41.80:42,0,1159	0/1:10,7:17:7.62:8,0,758	0/1:1,0:3:33.87:34,0,69	0/0:1,0:1:3.01:0,3,80	0/0:2,0:2:6.01:0,6,73	0/0:10,0:10:30.09:0,30,718	0/0:16,0:16:20.06:0,20,976	0/0:16,0:16:48.16:0,48,1272	0/0:21,0:21:20.39:0,20,1235	0/0:10,0:10:30.10:0,30,777
chr10	79042943	.	AATATATATAT	A	5243.48	PASS	AB=1.000;AC=26;AF=0.500;AN=52;BaseQRankSum=-2.252;DP=228;FS=0.000;HRun=0;HaplotypeScore=77.8649;InbreedingCoeff=0.4780;MQ=75.20;MQ0=2;MQRankSum=-2.724;QD=34.96;ReadPosRankSum=-1.177;VQSLOD=3.5773;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,1:1:3.01:94,3,0	0/0:13,0:8:3.01:0,3,38	0/1:27,0:11:27.15:27,0,123	1/1:1,5:6:3.01:94,3,0	0/0:3,0:3:3.01:0,3,126	0/0:4,0:4:5.75:0,6,39	1/1:13,23:36:69.19:1350,69,0	0/0:5,0:5:2.74:0,3,12	1/1:2,9:11:21.07:576,21,0	1/1:1,7:8:18.02:375,18,0	0/1:4,0:4:9.16:9,0,118	0/0:2,0:2:3.01:0,3,89	0/0:4,0:4:3.01:0,3,123	1/1:0,3:3:5.70:188,6,0	1/1:0,6:6:15.05:430,15,0	0/0:15,0:16:39.13:0,39,1902	0/0:3,0:5:6.02:0,6,184	1/1:2,17:19:48.16:1030,48,0	1/1:0,1:1:3.01:94,3,0	1/1:1,5:6:3.01:94,3,0	./.	0/0:3,0:3:3.01:0,3,126	0/0:2,0:2:3.01:0,3,99	1/1:5,4:8:6.02:148,6,0	0/0:1,0:2:3.01:0,3,92	1/1:3,10:13:24.08:735,24,0	0/0:4,0:18:30.10:0,30,881
chr10	79042950	.	A	ATATACTATATATACATAG	1369.70	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=-2.813;DP=211;FS=44.736;HRun=0;HaplotypeScore=111.8761;InbreedingCoeff=0.4990;MQ=81.64;MQ0=3;MQRankSum=0.704;QD=76.09;ReadPosRankSum=-0.535;VQSLOD=1.1900;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:1,0:1:3.01:0,3,126	0/0:18,0:12:6.15:0,6,41	0/0:34,0:13:13.95:0,14,232	0/0:5,0:5:3.01:0,3,112	1/1:0,3:4:3.01:261,3,0	1/1:2,2:4:6.02:503,6,0	0/0:26,0:26:25.64:0,26,338	1/1:0,2:2:3.01:260,3,0	0/0:11,0:10:18.05:0,18,472	0/0:7,0:7:14.87:0,15,249	1/1:3,0:3:6.02:225,6,0	1/1:2,0:2:3.01:128,3,0	1/1:3,0:3:3.01:128,3,0	0/0:3,0:3:5.93:0,6,250	0/0:6,0:6:14.54:0,15,363	0/0:17,0:17:48.13:0,48,1951	0/0:3,0:3:6.02:0,6,197	0/0:18,0:18:7.17:0,7,469	0/0:1,0:1:3.01:0,3,52	0/0:5,0:5:3.01:0,3,126	./.	0/0:1,0:1:3.01:0,3,47	0/0:2,0:2:6.02:0,6,149	0/0:5,0:4:6.01:0,6,146	0/0:1,0:1:3.01:0,3,130	0/0:13,0:13:24.08:0,24,827	0/0:15,0:15:30.10:0,30,1301
chr10	79042952	.	A	ATACTATATATATAG	1403.69	PASS	AB=0.970;AC=15;AF=0.278;AN=54;BaseQRankSum=-1.842;DP=216;FS=8.440;HRun=0;HaplotypeScore=94.5375;InbreedingCoeff=0.3048;MQ=83.04;MQ0=3;MQRankSum=0.514;QD=18.47;ReadPosRankSum=-4.008;VQSLOD=-0.0593;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:1,0:1:3.01:0,3,98	0/0:20,0:13:3.99:0,4,34	0/0:36,0:13:13.16:0,13,208	0/0:5,0:5:3.01:0,3,96	1/1:5,0:5:3.01:154,3,0	1/1:3,0:3:6.02:276,6,0	0/1:24,0:25:84.79:85,0,91	1/1:2,0:2:3.01:154,3,0	0/1:9,0:9:0.28:0,0,317	0/0:7,0:7:8.30:0,8,170	1/1:0,2:5:6.02:375,6,0	1/1:1,1:3:3.01:211,3,0	1/1:1,2:5:3.01:211,3,0	0/0:3,0:3:5.77:0,6,195	0/0:6,0:6:9.42:0,9,210	0/0:17,0:17:48.16:0,48,1609	0/0:3,0:3:6.02:0,6,143	0/1:18,0:18:79.59:80,0,269	0/0:1,0:1:3.01:0,3,35	0/0:5,0:5:3.01:0,3,98	0/0:1,0:1:3:0,3,26	0/0:1,0:1:3:0,3,27	0/0:2,0:2:6.02:0,6,133	0/0:4,0:4:6.01:0,6,96	0/0:1,0:1:3.01:0,3,104	0/0:11,0:11:18.99:0,19,590	0/0:15,0:15:30.10:0,30,1036
chr10	79044093	.	T	TC	920.67	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.045;DP=850;FS=1.574;HRun=5;HaplotypeScore=82.4333;InbreedingCoeff=0.9999;MQ=92.31;MQ0=0;MQRankSum=-4.377;QD=27.08;ReadPosRankSum=1.823;VQSLOD=3.6345;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:33:78.25:1016,78,0	0/0:15,0:15:42.09:0,42,438	0/0:34,0:31:65.96:0,66,657	0/0:41,0:41:97.96:0,98,961	0/0:35,0:35:99:0,105,1104	0/0:26,0:26:72.18:0,72,773	0/0:23,0:23:62.94:0,63,622	0/0:44,0:44:99:0,117,1205	0/0:28,0:28:78.16:0,78,815	0/0:39,0:39:99:0,114,1203	0/0:31,0:31:93.06:0,93,974	0/0:27,0:27:75.15:0,75,783	0/0:48,0:48:99:0,126,1309	0/0:34,0:34:99:0,102,1076	0/0:49,0:49:99:0,144,1522	0/0:42,0:42:99:0,123,1283	0/0:16,0:16:42.10:0,42,451	0/0:16,0:15:42.10:0,42,443	0/0:18,0:18:45.10:0,45,478	0/0:36,0:36:99:0,102,1088	0/0:30,0:30:84.18:0,84,892	0/0:26,0:26:75.12:0,75,762	0/0:23,0:23:66.14:0,66,689	0/0:26,0:26:72.09:0,72,736	0/0:29,0:29:78.18:0,78,825	0/0:35,0:35:99:0,102,1078	0/0:27,0:26:69.15:0,69,732	0/0:18,0:18:51.09:0,51,535
chr10	79044779	.	GA	G	625.23	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.254;DP=775;FS=2.879;HRun=4;HaplotypeScore=71.2549;InbreedingCoeff=0.9279;MQ=73.33;MQ0=0;MQRankSum=-0.743;QD=26.05;ReadPosRankSum=0.074;VQSLOD=2.4861;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:60.18:720,60,0	0/0:13,0:13:39.06:0,39,523	0/0:12,0:12:7.59:0,8,372	0/0:23,0:23:36.72:0,37,697	0/0:27,0:27:72.24:0,72,1008	0/0:30,0:30:90.28:0,90,1239	0/0:24,0:24:66.21:0,66,908	0/0:37,0:37:99:0,108,1471	0/0:20,0:20:60.20:0,60,840	0/0:32,0:32:87.29:0,87,1215	0/0:37,0:37:99:0,102,1424	0/0:31,0:31:90.30:0,90,1261	0/0:31,0:31:90.30:0,90,1260	0/0:12,0:12:36.12:0,36,501	0/0:28,0:28:84.28:0,84,1177	0/0:38,0:38:99:0,114,1593	0/0:39,0:39:99:0,108,1495	0/0:27,0:27:75.25:0,75,1048	0/0:23,0:23:66.22:0,66,921	0/0:44,0:44:99:0,123,1720	0/0:27,0:27:78.26:0,78,1092	0/0:29,0:29:87.29:0,87,1215	0/0:28,0:28:78.26:0,78,1091	0/0:21,0:21:60.19:0,60,823	0/0:26,0:26:78.24:0,78,1071	0/0:28,0:28:81.27:0,81,1135	0/0:44,0:44:99:0,126,1745	0/0:20,0:20:60.19:0,60,823
chr10	79044901	.	GC	G	3382.89	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.882;DP=733;FS=5.068;HRun=2;HaplotypeScore=142.4025;InbreedingCoeff=0.9689;MQ=79.40;MQ0=0;MQRankSum=-1.314;QD=36.38;ReadPosRankSum=1.833;VQSLOD=3.0469;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1728	0/0:15,0:15:45.15:0,45,675	0/0:15,0:15:6.92:0,7,564	0/0:22,0:22:66.19:0,66,963	0/0:24,0:24:72.24:0,72,1079	1/1:0,24:24:72.23:935,72,0	1/1:1,31:32:87.28:1130,87,0	0/0:36,0:36:99:0,102,1529	1/1:1,36:37:63.38:1318,63,0	0/0:24,0:24:69.23:0,69,1034	0/0:23,0:23:69.02:0,69,1002	0/0:31,0:31:93.30:0,93,1373	0/0:18,0:18:54.18:0,54,809	0/0:22,0:22:63.21:0,63,942	0/0:41,0:41:99:0,123,1839	0/0:41,2:43:48.51:0,49,1721	0/0:16,0:16:48.16:0,48,717	0/0:16,0:16:45.13:0,45,651	0/0:21,0:21:57.19:0,57,845	0/0:18,0:18:54.18:0,54,801	0/0:34,0:34:99:0,102,1508	0/0:26,0:26:78.26:0,78,1169	0/0:25,0:25:75.25:0,75,1124	0/0:23,0:23:69.22:0,69,1013	0/0:28,0:28:84.23:0,84,1194	0/0:32,0:32:93.32:0,93,1393	0/0:39,0:38:99:0,117,1732	0/0:9,0:9:27.09:0,27,405
chr10	79045331	.	AC	A	1255.01	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.205;DP=753;FS=1.834;HRun=3;HaplotypeScore=126.0537;InbreedingCoeff=0.9959;MQ=90.11;MQ0=0;MQRankSum=-11.518;QD=14.76;ReadPosRankSum=2.711;VQSLOD=3.3079;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,7:20:15.49:146,15,0	0/0:13,0:13:39.13:0,39,562	0/0:28,0:28:81.27:0,81,1141	0/0:33,0:34:72.69:0,73,968	0/0:29,0:29:75.20:0,75,1008	1/1:7,12:19:33.50:306,34,0	1/1:8,16:24:48.05:446,48,0	0/0:38,0:38:99:0,108,1523	1/1:4,18:22:56.93:516,57,0	0/0:20,0:20:60.20:0,60,863	0/0:24,0:24:72.23:0,72,1016	0/0:27,0:27:78.26:0,78,1122	0/0:29,0:29:87.28:0,87,1232	0/0:34,0:34:99:0,102,1450	0/0:45,0:45:99:0,132,1862	0/0:30,1:31:64.69:0,65,1263	0/0:23,0:23:69.23:0,69,994	0/0:17,0:17:51.17:0,51,732	0/0:29,0:29:87.28:0,87,1231	0/0:26,0:26:78.24:0,78,1087	0/0:27,0:27:78.24:0,78,1098	0/0:23,0:23:69.23:0,69,993	0/0:32,0:32:93.31:0,93,1324	0/0:32,0:32:96.32:0,96,1379	0/0:31,0:31:87.26:0,87,1214	0/0:25,0:25:75.23:0,75,1044	0/0:39,0:38:99:0,117,1680	0/0:12,0:12:36.12:0,36,518
chr10	79045337	.	GC	G	364.09	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.874;DP=724;FS=1.174;HRun=1;HaplotypeScore=121.9157;InbreedingCoeff=0.9656;MQ=92.20;MQ0=0;MQRankSum=-11.782;QD=6.87;ReadPosRankSum=4.176;VQSLOD=0.9675;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:5.40:46,5,0	0/0:14,0:14:42.14:0,42,672	0/0:30,0:30:87.27:0,87,1325	0/0:32,0:32:77.71:0,78,1089	0/0:27,0:27:81.26:0,81,1253	1/1:0,12:12:22.56:111,23,0	1/1:0,16:16:42.19:171,42,0	0/0:35,0:35:99:0,105,1634	1/1:0,18:18:47.14:190,47,0	0/0:21,0:21:63.21:0,63,987	0/0:24,0:24:69.24:0,69,1101	0/0:27,0:27:81.28:0,81,1295	0/0:29,0:29:87.30:0,87,1391	0/0:35,0:35:99:0,105,1678	0/0:47,0:47:99:0,141,2252	0/0:32,1:33:87.75:0,88,1479	0/0:23,0:23:69.24:0,69,1103	0/0:18,0:18:54.18:0,54,863	0/0:34,0:34:99:0,102,1545	0/0:27,0:27:81.26:0,81,1270	0/0:26,0:26:72.25:0,72,1144	0/0:24,0:24:72.23:0,72,1128	0/0:32,0:32:96.31:0,96,1512	0/0:30,0:30:90.29:0,90,1415	0/0:30,0:30:84.29:0,84,1343	0/0:24,0:24:72.24:0,72,1131	0/0:38,0:37:99:0,111,1772	0/0:11,0:11:33.11:0,33,528
chr10	79045339	.	TGC	T	711.14	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.873;DP=721;FS=1.847;HRun=0;HaplotypeScore=136.2010;InbreedingCoeff=0.9894;MQ=91.41;MQ0=0;MQRankSum=-11.807;QD=13.42;ReadPosRankSum=4.216;VQSLOD=3.8232;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:11.20:85,11,0	0/0:14,0:14:42.14:0,42,853	0/0:29,0:29:84.24:0,84,1555	0/0:31,0:31:81.11:0,81,1453	0/0:25,0:25:75.26:0,75,1484	1/1:0,12:12:30.91:194,31,0	1/1:0,16:16:46.88:279,47,0	0/0:31,0:31:93.31:0,93,1838	1/1:0,18:18:52.72:311,53,0	0/0:19,0:19:57.20:0,57,1140	0/0:23,0:23:66.21:0,66,1304	0/0:28,0:28:84.29:0,84,1688	0/0:31,0:31:93.32:0,93,1851	0/0:36,0:36:99:0,108,2175	0/0:47,0:47:99:0,141,2790	0/0:33,1:34:84.75:0,85,1915	0/0:23,0:23:69.24:0,69,1363	0/0:18,0:18:54.16:0,54,1059	0/0:36,0:36:99:0,105,1992	0/0:28,0:28:81.28:0,81,1587	0/0:25,0:25:72.25:0,72,1463	0/0:24,0:24:72.25:0,72,1462	0/0:33,0:33:99:0,99,1955	0/0:30,0:30:90.29:0,90,1752	0/0:30,0:30:87.30:0,87,1748	0/0:25,0:25:75.26:0,75,1504	0/0:37,0:36:99:0,111,2236	0/0:11,0:11:33.11:0,33,671
chr10	79045348	.	CAATGT	C	3427	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.178;DP=730;FS=4.136;HRun=0;HaplotypeScore=176.4847;InbreedingCoeff=0.9975;MQ=90.13;MQ0=0;MQRankSum=-12.005;QD=63.46;ReadPosRankSum=3.236;VQSLOD=4.6573;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:18.06:366,18,0	0/0:14,0:14:42.13:0,42,1238	0/0:29,0:29:81.19:0,81,2087	0/0:29,0:29:83.97:0,84,2251	0/0:24,0:24:72.25:0,72,2229	1/1:1,12:13:39.13:801,39,0	1/1:0,16:16:48.16:1064,48,0	0/0:36,0:36:99:0,105,3307	1/1:0,18:18:54.19:1196,54,0	0/0:20,0:20:60.21:0,60,1885	0/0:26,0:26:75.25:0,75,2326	0/0:31,0:31:87.28:0,87,2722	0/0:35,0:35:99:0,105,3335	0/0:35,0:35:99:0,105,3204	0/0:43,0:43:99:0,126,3985	0/0:31,1:32:29.94:0,30,2922	0/0:23,0:23:69.23:0,69,2158	0/0:19,0:19:57.17:0,57,1740	0/0:28,0:28:75.24:0,75,2241	0/0:29,0:29:87.24:0,87,2630	0/0:27,0:27:78.26:0,78,2356	0/0:25,0:25:75.25:0,75,2352	0/0:37,0:37:99:0,111,3531	0/0:28,0:28:84.28:0,84,2635	0/0:28,0:28:81.28:0,81,2616	0/0:27,0:27:81.26:0,81,2478	0/0:39,0:38:99:0,114,3610	0/0:12,0:12:32.61:0,33,919
chr10	79045516	.	CGT	C	4457.92	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.509;DP=814;FS=2.743;HRun=0;HaplotypeScore=105.0936;InbreedingCoeff=0.9994;MQ=82.52;MQ0=0;MQRankSum=-4.852;QD=37.15;ReadPosRankSum=2.758;VQSLOD=7.0287;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:78.26:1115,78,0	0/0:10,0:10:24.08:0,24,440	0/0:27,0:27:63.46:0,63,1249	0/0:20,0:20:48.13:0,48,844	0/0:28,0:28:81.26:0,81,1443	1/1:1,37:38:99:1416,99,0	1/1:3,17:20:48.16:686,48,0	0/0:40,0:40:99:0,111,2035	1/1:1,31:32:87.29:1241,87,0	0/0:28,0:28:84.29:0,84,1529	0/0:29,0:29:84.27:0,84,1489	0/0:34,0:34:96.33:0,96,1754	0/0:37,0:37:99:0,99,1714	0/0:36,0:36:99:0,102,1868	0/0:43,0:43:99:0,126,2293	0/0:44,1:45:89.83:0,90,2223	0/0:23,0:23:60.19:0,60,1068	0/0:17,0:17:48.12:0,48,844	0/0:17,0:17:33.10:0,33,575	0/0:29,0:29:87.28:0,87,1564	0/0:24,0:24:72.25:0,72,1319	0/0:32,0:32:87.28:0,87,1564	0/0:23,0:23:69.24:0,69,1264	0/0:25,0:25:75.26:0,75,1374	0/0:37,0:37:99:0,111,2025	0/0:28,0:28:84.29:0,84,1540	0/0:44,0:44:99:0,132,2377	0/0:18,0:18:48.16:0,48,856
chr10	79046641	.	A	ACTGATCATCTG	10567.50	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-5.479;DP=776;FS=0.000;HRun=0;HaplotypeScore=226.8578;InbreedingCoeff=0.9980;MQ=71.39;MQ0=0;MQRankSum=-13.052;QD=99.69;ReadPosRankSum=2.129;VQSLOD=4.8853;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.23:0,78,2463	0/0:14,0:14:30.10:0,30,949	0/0:30,0:30:69.22:0,69,1790	0/0:22,0:20:45.13:0,45,1121	0/0:33,0:33:72.23:0,72,2292	0/0:27,0:27:78.27:0,78,2530	0/0:20,0:20:54.15:0,54,1645	0/0:39,0:39:99:0,108,3271	0/0:32,0:32:75.26:0,75,2341	0/0:29,0:29:72.23:0,72,2215	0/0:20,0:20:51.16:0,51,1558	1/1:13,18:41:69.24:3808,69,0	1/1:16,11:34:63.69:3469,64,0	1/1:14,13:31:60.21:3291,60,0	0/0:52,0:52:99:0,123,3827	0/0:48,0:48:99:0,129,3936	0/0:13,0:13:39.12:0,39,1200	0/0:7,0:7:21.05:0,21,629	0/0:22,0:22:48.14:0,48,1411	0/0:34,0:34:84.26:0,84,2522	0/0:26,0:26:60.17:0,60,1637	0/0:29,0:29:75.26:0,75,2467	0/0:28,0:28:75.24:0,75,2444	0/0:15,0:15:33.11:0,33,1055	0/0:17,0:17:39.13:0,39,1239	0/0:40,0:40:99:0,108,3345	0/0:28,0:28:72.16:0,72,2076	0/0:16,0:16:30.10:0,30,1011
chr10	79046975	.	GAAGAATT	G	473.47	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.477;DP=633;FS=3.373;HRun=0;HaplotypeScore=140.8515;InbreedingCoeff=0.9799;MQ=65.81;MQ0=0;MQRankSum=-4.365;QD=43.04;ReadPosRankSum=0.759;VQSLOD=3.3107;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,9:11:21.07:566,21,0	0/0:5,0:5:15.05:0,15,615	0/0:24,0:23:66.21:0,66,2387	0/0:17,0:16:45.15:0,45,1671	0/0:25,0:25:75.26:0,75,2934	0/0:28,0:28:78.27:0,78,3063	0/0:22,0:22:66.22:0,66,2547	0/0:46,0:46:99:0,132,5023	0/0:18,0:18:54.19:0,54,2070	0/0:22,0:22:66.22:0,66,2587	0/0:26,0:26:75.26:0,75,2970	0/0:15,0:15:45.15:0,45,1679	0/0:33,0:33:99:0,99,3651	0/0:31,0:31:90.28:0,90,3382	0/0:28,0:28:81.28:0,81,3258	0/0:31,0:31:93.32:0,93,3731	0/0:14,0:14:42.13:0,42,1519	0/0:15,0:15:45.15:0,45,1842	0/0:14,0:14:42.14:0,42,1532	0/0:25,0:25:75.26:0,75,2945	0/0:22,0:22:66.23:0,66,2690	0/0:18,0:18:54.17:0,54,2056	0/0:19,0:19:54.19:0,54,2142	0/0:17,0:17:45.15:0,45,1844	0/0:23,0:23:66.23:0,66,2640	0/0:39,0:39:99:0,117,4580	0/0:35,0:35:99:0,105,4093	0/0:10,0:10:30.10:0,30,1204
chr10	79047179	.	GT	G	1439.02	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=4.166;DP=485;FS=1.619;HRun=10;HaplotypeScore=97.9869;InbreedingCoeff=0.9205;MQ=63.93;MQ0=8;MQRankSum=-7.382;QD=14.68;ReadPosRankSum=1.528;VQSLOD=3.9731;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:44.95:0,45,478	0/0:6,0:6:15.04:0,15,166	0/0:22,0:8:7.14:0,7,105	0/1:26,0:12:0.39:0,0,39	0/0:21,0:21:48.12:0,48,524	1/1:3,11:13:35.65:294,36,0	1/1:2,12:15:38.86:322,39,0	0/0:36,1:37:56.23:0,56,792	1/1:1,7:8:20.99:182,21,0	0/0:9,0:9:24.05:0,24,255	0/0:25,0:25:68.95:0,69,721	1/1:0,8:8:24:208,24,0	1/1:2,13:15:38.99:337,39,0	1/1:4,8:12:32.96:282,33,0	0/0:13,0:13:36.10:0,36,398	0/0:19,0:19:51.14:0,51,564	0/0:20,0:20:35.80:0,36,384	0/0:19,0:19:45.10:0,45,487	0/0:20,1:19:25.59:0,26,498	0/0:28,0:28:63.13:0,63,684	0/0:12,0:11:26.74:0,27,261	0/0:9,0:9:27.02:0,27,283	0/0:14,0:14:33.08:0,33,357	0/0:11,0:11:24.06:0,24,265	0/0:24,2:26:20.20:0,20,671	0/0:23,0:23:48.13:0,48,531	0/0:25,1:26:40.26:0,40,670	0/0:5,0:5:15.04:0,15,166
chr10	79047194	.	GT	G	6118.36	PASS	AB=0.917;AC=43;AF=0.768;AN=56;BaseQRankSum=3.135;DP=500;FS=15.911;HRun=12;HaplotypeScore=91.8059;InbreedingCoeff=0.5770;MQ=58.88;MQ0=11;MQRankSum=-0.011;QD=13.60;ReadPosRankSum=2.681;VQSLOD=3.6033;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,11:20:17.40:226,17,0	1/1:0,5:5:14.94:116,15,0	0/1:26,0:10:9.50:9,0,24	0/1:27,0:9:0.31:5,0,0	1/1:1,16:17:47.82:371,48,0	0/1:13,0:12:5.25:15,0,5	0/1:13,0:13:11.90:12,0,13	1/1:11,21:32:60.69:479,61,0	1/1:8,0:8:5.74:22,6,0	1/1:1,11:11:32.83:249,33,0	1/1:2,23:25:68.71:531,69,0	1/1:0,14:14:41.84:324,42,0	1/1:2,14:16:38.81:299,39,0	1/1:3,10:13:29.87:232,30,0	1/1:1,16:17:44.79:345,45,0	1/1:2,18:20:50.72:392,51,0	0/0:18,0:18:36.68:0,37,359	1/1:7,20:27:17.49:318,17,0	1/1:11,8:16:23.74:185,24,0	1/1:2,25:27:65.40:508,65,0	1/1:7,8:11:23.88:185,24,0	0/0:8,0:8:18.04:0,18,183	0/0:13,1:14:18.80:0,19,359	0/0:10,0:10:24.04:0,24,237	1/1:8,18:26:46.97:355,47,0	1/1:5,17:22:47.03:353,47,0	1/1:3,26:28:65.70:508,66,0	0/1:2,5:7:8.05:78,0,8
chr10	79047198	.	TTTTTTTTTG	T	1574.51	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.677;DP=502;FS=4.731;HRun=0;HaplotypeScore=181.8437;InbreedingCoeff=0.9001;MQ=58.56;MQ0=11;MQRankSum=-5.388;QD=52.48;ReadPosRankSum=0.081;VQSLOD=3.4301;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:39.39:0,39,1288	0/0:5,0:5:15.04:0,15,411	0/0:25,0:9:8.46:0,8,115	0/0:27,0:9:2.18:0,2,50	0/0:18,0:18:54.10:0,54,1329	1/1:5,5:9:24.07:598,24,0	1/1:5,6:11:26.97:562,27,0	0/0:35,0:35:86.28:0,86,1263	1/1:4,5:9:24.06:556,24,0	0/0:13,0:12:35.75:0,36,614	0/0:25,0:25:74.76:0,75,1753	0/0:14,0:14:41.94:0,42,879	0/0:16,0:16:44.79:0,45,880	0/0:13,0:13:36.03:0,36,770	0/0:18,0:18:48:0,48,1146	0/0:20,0:20:56.96:0,57,1275	0/0:19,0:19:49.34:0,49,1383	0/0:28,0:28:59.98:0,60,1666	0/0:17,0:14:35.97:0,36,783	0/0:29,0:29:80.95:0,81,1793	0/0:14,0:10:27.04:0,27,724	0/0:7,0:7:18.06:0,18,750	0/0:14,0:14:42.14:0,42,1676	0/0:10,0:10:27.08:0,27,913	0/0:24,0:25:31.06:0,31,1350	0/0:22,0:22:58.28:0,58,1485	0/0:30,0:29:74.73:0,75,1583	0/0:7,0:7:18.05:0,18,388
chr10	79048862	.	AG	A	17958.59	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=14.513;DP=768;FS=2.377;HRun=2;HaplotypeScore=91.4920;InbreedingCoeff=0.9738;MQ=88.84;MQ0=0;MQRankSum=-6.481;QD=35.21;ReadPosRankSum=2.828;VQSLOD=5.3189;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,1864	1/1:0,12:12:30.10:390,30,0	0/0:39,0:39:99:0,106,1496	0/0:30,0:30:75.46:0,75,1063	1/1:2,31:33:90.29:1168,90,0	1/1:0,24:24:63.20:818,63,0	1/1:2,30:32:84.27:1091,84,0	1/1:0,28:28:84.24:1049,84,0	1/1:0,24:24:63.20:818,63,0	1/1:0,22:22:66.21:850,66,0	1/1:0,17:17:51.12:643,51,0	1/1:1,32:33:87.28:1130,87,0	1/1:0,26:26:75.24:974,75,0	1/1:0,24:24:69.22:896,69,0	1/1:0,36:36:96.31:1247,96,0	1/1:0,44:44:99:1597,123,0	0/0:22,0:22:63.21:0,63,943	0/0:21,0:21:60.14:0,60,847	1/1:0,25:25:72.20:905,72,0	1/1:0,21:21:60.16:761,60,0	1/1:0,48:48:99:1714,132,0	0/0:31,0:31:84.27:0,84,1236	0/0:17,0:17:51.17:0,51,763	0/0:35,0:35:99:0,102,1506	1/1:0,22:22:54.18:701,54,0	0/0:19,0:19:51.17:0,51,764	1/1:0,39:39:93.30:1208,93,0	0/0:1,0:1:3.01:0,3,45
chr10	79049156	.	CA	C	7317.38	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=14.080;DP=542;FS=1.886;HRun=9;HaplotypeScore=73.6986;InbreedingCoeff=0.9644;MQ=67.53;MQ0=0;MQRankSum=0.026;QD=23.84;ReadPosRankSum=0.748;VQSLOD=5.6770;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.19:0,72,812	1/1:0,3:3:9:82,9,0	0/0:7,0:8:8.21:0,8,129	0/0:6,0:6:6.48:0,6,63	1/1:4,28:32:56.48:688,56,0	0/0:22,0:22:60.18:0,60,693	0/0:19,0:19:54.15:0,54,614	1/1:3,24:27:72:650,72,0	0/0:17,0:17:28.45:0,28,468	1/1:1,21:22:63.03:573,63,0	1/1:0,25:25:69.04:630,69,0	1/1:2,12:14:33.01:302,33,0	1/1:3,18:21:45.02:412,45,0	1/1:2,12:14:30.01:275,30,0	1/1:2,18:20:48.02:439,48,0	1/1:1,22:23:66.04:604,66,0	0/0:22,0:21:66.20:0,66,762	0/0:22,0:22:63.16:0,63,714	1/1:0,17:17:50.98:456,51,0	1/1:3,22:25:59.99:541,60,0	1/1:1,5:6:15.01:137,15,0	0/0:26,0:26:72.20:0,72,819	0/0:25,0:25:72.21:0,72,829	0/0:6,0:6:18.01:0,18,193	1/1:0,29:29:83.99:759,84,0	0/0:22,2:24:17.28:0,17,707	1/1:1,28:29:84.04:769,84,0	0/0:10,0:10:27.08:0,27,312
chr10	79050666	.	T	TGG	4494.30	PASS	AB=0.923;AC=35;AF=0.625;AN=56;BaseQRankSum=8.502;DP=480;FS=8.365;HRun=2;HaplotypeScore=95.3307;InbreedingCoeff=0.8717;MQ=74.77;MQ0=0;MQRankSum=-4.869;QD=14.50;ReadPosRankSum=-0.052;VQSLOD=1.3994;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:39.10:0,39,469	1/1:0,5:5:11.93:121,12,0	0/0:19,0:17:28.84:0,29,401	0/0:16,0:14:38.71:0,39,351	1/1:14,5:19:31.33:341,31,0	1/1:25,0:24:5.67:248,6,0	1/1:17,0:17:28.80:248,29,0	1/1:8,17:25:59.38:650,59,0	1/1:14,0:14:17.91:147,18,0	1/1:12,4:16:11.23:249,11,0	1/1:5,9:14:24.76:245,25,0	1/1:23,0:23:29.08:256,29,0	1/1:17,0:17:11.78:132,12,0	1/1:12,0:12:17.07:170,17,0	1/1:4,17:21:26.13:366,26,0	1/1:1,16:17:24.08:324,24,0	0/0:23,0:23:60.12:0,60,809	0/0:12,0:12:36.09:0,36,477	1/1:8,7:15:16.22:185,16,0	1/1:6,12:17:22.07:253,22,0	0/1:11,1:12:13.14:104,0,13	0/0:9,0:9:27.08:0,27,376	0/0:19,0:19:48.12:0,48,647	0/0:9,0:9:27.06:0,27,354	1/1:12,3:15:4.94:197,5,0	0/0:24,0:24:69.20:0,69,938	1/1:4,21:25:17.11:261,17,0	0/0:23,0:23:59.67:0,60,815
chr10	79050672	.	G	GAAAA	5486.40	PASS	AB=0.900;AC=34;AF=0.607;AN=56;BaseQRankSum=7.736;DP=520;FS=4.812;HRun=12;HaplotypeScore=129.7727;InbreedingCoeff=0.8096;MQ=72.55;MQ0=0;MQRankSum=-5.818;QD=16.18;ReadPosRankSum=-4.635;VQSLOD=1.6253;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:19:7.76:0,8,24	1/1:4,0:4:11.18:62,11,0	0/0:19,0:17:11.55:0,12,157	0/0:13,0:14:7.71:0,8,167	1/1:19,0:21:35.48:265,35,0	1/1:15,11:31:36.52:629,37,0	1/1:5,9:16:27.09:549,27,0	1/1:24,0:25:21.12:333,21,0	1/1:7,11:19:21.07:437,21,0	0/1:17,0:17:12.78:165,0,13	1/1:13,1:14:34.85:301,35,0	1/1:26,0:26:45.07:670,45,0	1/1:11,10:23:15.05:322,15,0	1/1:14,0:14:20.97:336,21,0	1/1:22,0:24:36.53:273,37,0	1/1:16,0:16:29.42:191,29,0	0/0:19,0:20:32.64:0,33,417	0/0:13,0:14:26.79:0,27,319	1/1:13,0:16:15.86:145,16,0	1/1:20,0:21:47.49:425,47,0	0/1:9,0:12:58.34:98,0,58	0/0:8,0:9:17.99:0,18,219	0/0:18,0:20:43.10:0,43,526	0/0:12,0:12:26.90:0,27,313	1/1:12,0:15:13.46:124,13,0	0/0:23,0:27:20.95:0,21,493	1/1:22,0:23:24.85:162,25,0	0/0:24,0:25:30.64:0,31,536
chr10	79052112	.	TGAC	T	12062.44	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=20.145;DP=708;FS=7.648;HRun=0;HaplotypeScore=125.3592;InbreedingCoeff=0.9853;MQ=85.80;MQ0=0;MQRankSum=-9.810;QD=44.02;ReadPosRankSum=2.096;VQSLOD=6.7190;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,3067	1/1:0,10:10:30.10:512,30,0	0/0:26,0:26:69.22:0,69,1499	0/0:23,0:23:60.21:0,60,1348	1/1:0,22:22:57.19:958,57,0	0/0:22,0:22:66.23:0,66,1494	0/0:36,0:36:99:0,105,2319	1/1:1,29:30:84.18:1312,84,0	0/0:19,0:19:57.20:0,57,1281	1/1:0,16:16:48.13:764,48,0	1/1:0,11:11:30.02:463,30,0	0/0:30,0:30:87.25:0,87,1907	0/0:33,0:33:87.23:0,87,1918	0/0:37,0:37:99:0,105,2263	1/1:0,37:37:99:1756,105,0	1/1:1,22:23:57.20:972,57,0	0/0:43,0:43:99:0,126,2775	0/0:20,0:20:60.13:0,60,1286	1/1:0,21:21:63.20:1038,63,0	1/1:1,20:21:57.09:908,57,0	1/1:0,30:30:81.04:1251,81,0	0/0:21,0:21:63.22:0,63,1423	0/0:20,0:20:58.40:0,58,1254	0/0:32,0:32:93.23:0,93,1980	1/1:0,21:21:51.11:836,51,0	0/0:23,0:23:63.17:0,63,1400	1/1:1,31:32:78.20:1292,78,0	0/0:2,0:2:6.02:0,6,138
chr10	79052951	.	CTA	C	11782.13	PASS	AB=0.909;AC=31;AF=0.554;AN=56;BaseQRankSum=7.173;DP=654;FS=24.683;HRun=0;HaplotypeScore=88.2119;InbreedingCoeff=0.9138;MQ=68.99;MQ0=2;MQRankSum=0.393;QD=28.95;ReadPosRankSum=0.828;VQSLOD=3.6872;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:93.29:0,93,1521	1/1:1,13:14:39.12:497,39,0	0/0:7,0:7:12.04:0,12,191	0/0:10,0:10:15.04:0,15,225	1/1:7,25:32:26.35:814,26,0	0/0:7,0:33:69.06:0,69,660	0/0:6,0:24:51.01:0,51,447	1/1:4,28:32:84.24:1042,84,0	0/0:4,0:20:54.03:0,54,523	1/1:2,32:34:96.28:1186,96,0	1/1:1,23:24:66.21:840,66,0	1/1:5,23:28:66.21:840,66,0	1/1:3,16:19:48.15:611,48,0	1/1:5,25:30:69.22:878,69,0	1/1:7,21:28:60.19:764,60,0	1/1:3,16:20:47.98:587,48,0	0/0:24,0:24:57.19:0,57,948	0/0:25,0:25:66.23:0,66,1104	1/1:4,12:16:36.12:458,36,0	1/1:6,33:38:90.29:1145,90,0	1/1:2,11:13:24.08:306,24,0	0/0:18,1:19:9.96:0,10,711	0/0:22,0:22:57.18:0,57,923	0/0:18,0:18:42.14:0,42,703	1/1:2,22:24:57.18:726,57,0	0/1:18,2:20:19.21:19,0,796	1/1:3,31:33:84.11:1069,84,0	0/0:8,0:8:18.06:0,18,301
chr10	79053882	.	GAGCA	G	3715.91	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.638;DP=729;FS=5.266;HRun=0;HaplotypeScore=119.3597;InbreedingCoeff=0.9890;MQ=86.10;MQ0=0;MQRankSum=-3.134;QD=44.77;ReadPosRankSum=4.773;VQSLOD=4.3282;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,3274	0/0:12,0:12:36.12:0,36,977	0/0:23,0:23:53.19:0,53,1339	0/0:27,0:27:68.42:0,68,1364	0/0:24,0:24:65.97:0,66,1551	0/0:16,0:16:45.15:0,45,1220	0/0:33,0:33:96.32:0,96,2496	0/0:33,0:33:93.28:0,93,2240	0/0:25,0:25:69.24:0,69,1883	0/0:20,0:20:57.16:0,57,1498	0/0:21,0:21:63.17:0,63,1515	1/1:2,38:40:93.32:1775,93,0	1/1:1,18:19:39.13:737,39,0	1/1:0,24:24:66.18:1204,66,0	0/0:45,0:45:99:0,129,3317	0/0:30,0:30:90.30:0,90,2379	0/0:35,0:35:99:0,105,2605	0/0:15,0:14:39.05:0,39,943	0/0:15,0:15:42.14:0,42,1099	0/0:28,0:28:81.24:0,81,1970	0/0:37,0:37:99:0,105,2651	0/0:22,0:22:63.18:0,63,1495	0/0:19,0:19:54.14:0,54,1289	0/0:35,0:35:99:0,102,2644	0/0:20,0:20:60.21:0,60,1613	0/0:29,0:29:81.26:0,81,2038	0/0:36,0:36:99:0,105,2700	0/0:4,0:4:12.04:0,12,328
chr10	79054667	.	A	AAGAG	2113.19	PASS	AB=1.000;AC=36;AF=0.667;AN=54;BaseQRankSum=1.968;DP=327;FS=0.000;HRun=0;HaplotypeScore=82.0652;InbreedingCoeff=0.6857;MQ=56.80;MQ0=7;MQRankSum=-2.471;QD=8.73;ReadPosRankSum=-1.186;VQSLOD=2.3264;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:5.44:43,5,0	1/1:7,0:6:2.99:24,3,0	0/0:29,0:12:18.46:0,18,195	0/1:28,0:6:2.83:3,0,12	0/1:6,0:6:0:0,0,0	1/1:1,5:6:12.04:297,12,0	1/1:1,15:17:33.11:817,33,0	1/1:30,0:25:27.01:199,27,0	./.	1/1:15,0:14:21.06:221,21,0	1/1:9,0:8:2:17,2,0	1/1:6,0:15:2.74:52,3,0	1/1:12,0:13:15.34:137,15,0	1/1:7,0:7:4.43:19,4,0	1/1:17,0:17:17.73:130,18,0	1/1:8,0:8:4.89:34,5,0	0/0:7,0:7:15.05:0,15,252	0/0:6,0:6:18.06:0,18,298	1/1:21,0:20:26.44:163,26,0	1/1:10,0:10:6.32:49,6,0	1/1:8,0:8:3.47:26,3,0	0/0:9,0:9:24.04:0,24,370	0/0:4,0:4:12.04:0,12,201	0/0:9,0:9:24.07:0,24,374	1/1:4,0:4:2.99:24,3,0	0/0:12,0:12:21.04:0,21,319	1/1:12,0:10:6.88:44,7,0	0/0:7,0:6:15.03:0,15,220
chr10	79056055	.	AGGGT	A	4448.28	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=13.010;DP=729;FS=4.738;HRun=0;HaplotypeScore=131.8969;InbreedingCoeff=0.9985;MQ=81.47;MQ0=0;MQRankSum=-2.849;QD=51.13;ReadPosRankSum=2.890;VQSLOD=6.1322;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,3847	0/0:13,0:13:36.12:0,36,986	0/0:27,0:27:78.08:0,78,1902	0/0:21,0:21:60.20:0,60,1515	0/0:36,0:36:99:0,105,2816	0/0:27,0:27:75.26:0,75,2016	0/0:22,0:22:63.19:0,63,1666	0/0:41,0:41:99:0,111,2831	0/0:13,0:13:36.12:0,36,939	0/0:25,0:25:63.22:0,63,1714	0/0:19,0:19:54.19:0,54,1422	1/1:1,21:22:57.20:1104,57,0	1/1:1,34:35:90.22:1667,90,0	1/1:2,28:30:87.30:1677,87,0	0/0:38,0:38:99:0,111,2984	0/0:30,0:30:84.29:0,84,2285	0/0:41,0:41:99:0,114,3000	0/0:20,0:20:60.19:0,60,1528	0/0:18,0:18:51.16:0,51,1266	0/0:32,0:32:96.33:0,96,2598	0/0:33,0:33:96.33:0,96,2623	0/0:21,0:21:60.21:0,60,1640	0/0:19,0:19:54.19:0,54,1472	0/0:21,0:21:60.18:0,60,1497	0/0:21,0:21:63.22:0,63,1715	0/0:31,0:31:93.32:0,93,2528	0/0:17,0:16:51.13:0,51,1293	0/0:7,0:7:21.07:0,21,560
chr10	79056568	.	G	GGTGGATGAA	61015.35	PASS	AB=0.975;AC=39;AF=0.696;AN=56;BaseQRankSum=-11.605;DP=791;FS=3.104;HRun=0;HaplotypeScore=166.2517;InbreedingCoeff=0.9145;MQ=75.63;MQ0=0;MQRankSum=-18.261;QD=97.94;ReadPosRankSum=-0.914;VQSLOD=5.2185;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,14:29:48.12:2198,48,0	1/1:2,6:10:24.08:1052,24,0	0/0:29,0:29:75.26:0,75,2198	0/0:21,0:21:51.17:0,51,1377	1/1:6,23:35:78.27:3612,78,0	1/1:3,28:37:93.32:4539,93,0	1/1:7,8:20:42.14:1900,42,0	1/1:9,18:51:99:5804,150,0	1/1:5,20:35:75.21:3386,75,0	1/1:7,19:34:90.30:3933,90,0	1/1:1,11:18:42.06:1770,42,0	1/1:4,27:36:96.33:4611,96,0	1/1:6,20:33:75.21:3485,75,0	1/1:6,19:35:78.14:3419,78,0	1/1:10,24:43:99:4644,99,0	1/1:7,22:39:81.28:3925,81,0	0/0:21,0:21:63.20:0,63,1833	0/0:18,0:18:54.19:0,54,1672	1/1:6,3:14:42.13:1631,42,0	1/1:9,23:38:87.30:3900,87,0	1/1:5,5:14:21.07:1012,21,0	0/0:28,0:28:75.26:0,75,2312	0/0:20,0:20:57.20:0,57,1732	0/0:21,0:21:57.05:0,57,1433	1/1:10,15:31:63.22:2986,63,0	0/1:38,1:39:32.49:32,0,3130	1/1:8,16:31:72.20:3175,72,0	0/0:10,0:10:30.10:0,30,931
chr10	79059042	.	G	GC	142.93	PASS	AB=0.733;AC=1;AF=0.018;AN=56;BaseQRankSum=5.418;DP=752;FS=0.000;HRun=2;HaplotypeScore=141.1710;InbreedingCoeff=-0.0198;MQ=82.15;MQ0=0;MQRankSum=5.365;QD=6.50;ReadPosRankSum=-1.400;VQSLOD=0.0751;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,132,1621	0/0:17,0:17:48.15:0,48,593	0/1:14,8:22:99:217,0,396	0/0:23,1:24:15.51:0,16,637	0/0:23,0:23:66.21:0,66,817	0/0:17,0:17:51.14:0,51,618	0/0:38,0:38:99:0,108,1323	0/0:42,0:42:99:0,120,1445	0/0:34,0:34:99:0,99,1196	0/0:25,0:25:69.20:0,69,832	0/0:14,0:14:42.13:0,42,519	0/0:33,0:33:96.30:0,96,1189	0/0:35,0:35:99:0,99,1212	0/0:29,0:29:87.27:0,87,1075	0/0:29,0:29:87.27:0,87,1078	0/0:34,0:34:99:0,102,1250	0/0:37,0:37:99:0,111,1336	0/0:24,0:24:69.18:0,69,839	0/0:18,0:18:54.17:0,54,666	0/0:21,0:21:63.20:0,63,778	0/0:27,0:27:78.24:0,78,964	0/0:26,0:26:75.21:0,75,902	0/0:26,0:26:69.22:0,69,854	0/0:33,0:33:99:0,99,1227	0/0:20,0:20:57.17:0,57,693	0/0:30,0:30:84.19:0,84,991	0/0:22,0:22:66.19:0,66,805	0/0:4,0:4:12.04:0,12,149
chr10	79059622	.	T	TTCTATCTA	9429.05	PASS	AC=26;AF=0.500;AN=52;BaseQRankSum=-5.250;DP=725;FS=0.000;HRun=0;HaplotypeScore=198.0851;InbreedingCoeff=0.9387;MQ=63.09;MQ0=3;MQRankSum=-11.019;QD=23.81;ReadPosRankSum=-4.989;VQSLOD=2.6649;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:21.07:627,21,0	1/1:7,0:17:9.03:327,9,0	./.	./.	1/1:21,8:30:8.81:340,9,0	0/0:15,0:24:18.06:0,18,335	0/0:15,0:22:12.24:0,12,243	1/1:36,0:36:9.03:126,9,0	0/0:26,0:26:36.12:0,36,825	1/1:21,15:36:57.20:1914,57,0	1/1:16,20:39:27.09:1089,27,0	0/0:29,0:30:39.13:0,39,910	0/0:24,0:24:36.12:0,36,828	0/0:29,0:29:36.12:0,36,834	1/1:14,7:21:18.06:687,18,0	1/1:19,13:33:30.10:1170,30,0	0/0:26,0:26:48.16:0,48,1103	0/0:6,0:13:9.21:0,9,219	1/1:14,5:19:15.05:461,15,0	1/1:25,14:41:27.09:1091,27,0	1/1:17,0:18:9.03:215,9,0	0/0:19,0:19:27.09:0,27,625	0/0:23,0:23:45.15:0,45,1009	0/0:20,0:20:27.07:0,27,585	1/1:29,0:39:15.05:551,15,0	0/0:6,0:14:12.69:0,13,276	1/1:23,18:40:21.03:832,21,0	0/0:8,0:16:18.06:0,18,335
chr10	79059665	.	T	TATCTATCA	6283.95	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=-3.905;DP=614;FS=7.544;HRun=0;HaplotypeScore=195.5782;InbreedingCoeff=-0.1497;MQ=60.03;MQ0=2;MQRankSum=-12.244;QD=18.37;ReadPosRankSum=0.020;VQSLOD=3.4319;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,18:29:27.02:845,27,0	0/1:14,0:14:64.95:74,0,65	0/0:7,0:6:14.51:0,15,137	0/0:10,0:9:10.35:0,10,167	0/1:27,0:27:99:145,0,315	0/0:27,0:27:71.99:0,72,843	0/0:15,0:15:29.96:0,30,463	0/1:35,0:35:33.66:34,0,629	0/0:25,0:25:69.09:0,69,1261	0/1:36,0:36:99:1320,0,446	0/1:35,0:35:99:878,0,170	0/0:24,0:24:69.11:0,69,1292	0/0:20,0:20:60.10:0,60,1186	0/0:23,0:22:63.08:0,63,1213	0/1:20,0:20:99:367,0,258	0/1:32,0:32:99:966,0,286	0/0:22,0:22:59.78:0,60,1383	0/0:11,0:11:13.78:0,14,330	0/1:14,0:13:97.74:366,0,98	0/1:28,0:28:99:675,0,172	0/1:21,0:21:99:113,0,191	0/0:22,0:22:66.03:0,66,1064	0/0:24,0:24:72.12:0,72,1440	0/0:17,0:17:42.05:0,42,805	0/1:26,0:26:99:130,0,266	0/0:14,0:14:38.99:0,39,535	0/1:25,0:24:99:372,0,149	0/0:11,0:11:27.05:0,27,470
chr10	79060116	.	T	TG	808.10	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=3.641;DP=723;FS=7.723;HRun=1;HaplotypeScore=169.5683;InbreedingCoeff=0.7011;MQ=71.90;MQ0=4;MQRankSum=-0.509;QD=17.19;ReadPosRankSum=-1.008;VQSLOD=2.9696;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,1668	0/0:10,0:10:25.53:0,26,146	0/0:23,0:21:41.83:0,42,600	0/0:21,0:14:36.03:0,36,421	0/0:32,0:32:82.37:0,82,490	0/0:23,0:23:54.12:0,54,302	0/0:25,0:25:57.89:0,58,312	0/0:20,0:19:41.99:0,42,307	0/0:29,0:29:76.59:0,77,418	0/0:35,0:35:69.19:0,69,701	0/0:21,0:21:48.24:0,48,348	0/0:20,0:20:52.70:0,53,244	0/0:22,0:22:54.21:0,54,290	0/0:30,0:30:78.06:0,78,441	0/0:33,0:33:47.50:0,47,378	0/0:33,0:33:81.36:0,81,507	0/0:22,0:22:63.20:0,63,815	1/1:9,6:15:39.53:401,40,0	0/0:14,0:14:38.36:0,38,293	0/0:20,0:19:39.06:0,39,264	0/0:45,0:45:99:0,117,705	0/0:25,0:25:72.23:0,72,929	0/0:29,0:29:87.28:0,87,1123	0/0:33,0:33:93.30:0,93,1204	0/0:33,0:31:70.94:0,71,439	0/1:18,0:18:11.77:171,0,12	0/0:33,0:33:72.13:0,72,331	1/1:3,11:14:2.69:355,3,0
chr10	79060118	.	T	TG	14473.01	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=5.824;DP=736;FS=0.000;HRun=7;HaplotypeScore=120.2981;InbreedingCoeff=0.9630;MQ=73.01;MQ0=4;MQRankSum=-3.014;QD=27.20;ReadPosRankSum=2.747;VQSLOD=3.8646;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,114,1100	1/1:1,10:11:27.08:326,27,0	0/0:25,0:22:31.81:0,32,478	0/0:21,0:15:28.11:0,28,322	1/1:3,30:33:75.18:890,75,0	1/1:2,22:24:54.17:652,54,0	1/1:3,23:26:59.78:724,60,0	1/1:4,16:19:39.06:441,39,0	1/1:2,26:28:75.23:906,75,0	1/1:8,25:33:75.21:891,75,0	1/1:4,16:20:42.13:504,42,0	1/1:1,19:20:57.17:688,57,0	1/1:1,20:21:54.17:652,54,0	1/1:4,28:32:75.23:897,75,0	1/1:1,33:34:78.24:942,78,0	1/1:4,31:35:75.22:906,75,0	0/0:21,0:21:54.08:0,54,521	1/1:15,0:15:39.06:401,39,0	1/1:3,12:15:36.05:396,36,0	1/1:3,16:18:42.13:506,42,0	1/1:5,40:45:99:1339,111,0	0/0:26,0:26:69.10:0,69,664	0/0:29,0:29:78.12:0,78,753	0/0:36,0:36:96.08:0,96,911	1/1:3,30:31:66.20:797,66,0	1/1:7,13:20:12.53:246,13,0	1/1:1,33:34:84.26:1012,84,0	1/1:14,0:14:2.92:355,3,0
chr10	79060734	.	TAAA	T	15412.01	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=5.983;DP=592;FS=1.880;HRun=9;HaplotypeScore=91.9703;InbreedingCoeff=0.9981;MQ=70.67;MQ0=3;MQRankSum=-4.272;QD=32.72;ReadPosRankSum=2.909;VQSLOD=4.1545;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:33.37:0,33,208	1/1:1,11:12:30.53:404,31,0	0/0:13,0:11:22.89:0,23,431	0/0:16,0:16:26.70:0,27,337	1/1:4,27:30:75.20:1034,75,0	1/1:3,24:26:63.08:826,63,0	1/1:0,19:19:45.15:639,45,0	1/1:4,26:30:78.23:1076,78,0	1/1:0,21:21:63.18:872,63,0	1/1:2,19:21:51.12:685,51,0	1/1:6,23:29:60.01:780,60,0	1/1:1,18:19:51.08:678,51,0	1/1:4,17:21:54.17:765,54,0	1/1:1,12:13:27.09:383,27,0	1/1:1,23:24:63.16:872,63,0	1/1:2,20:22:51.17:724,51,0	0/0:24,0:24:69.22:0,69,1363	1/1:6,19:25:51.16:723,51,0	1/1:0,16:16:48.13:655,48,0	1/1:4,22:26:60.18:851,60,0	1/1:1,12:13:30.06:402,30,0	0/0:16,0:17:51.17:0,51,998	0/0:19,0:19:54.18:0,54,1072	0/0:10,0:10:30.09:0,30,580	1/1:6,26:32:69.18:952,69,0	1/1:2,19:21:57.16:772,57,0	1/1:4,33:36:72.24:1021,72,0	1/1:5,7:12:21.05:297,21,0
chr10	79060742	.	AAT	A	334.12	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.463;DP=603;FS=19.896;HRun=0;HaplotypeScore=132.9795;InbreedingCoeff=0.9258;MQ=67.23;MQ0=3;MQRankSum=-6.370;QD=13.92;ReadPosRankSum=-1.894;VQSLOD=1.5932;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:31.35:429,31,0	0/0:12,0:12:23.91:0,24,83	0/0:14,0:12:36.02:0,36,479	0/0:14,0:14:34.16:0,34,365	0/0:34,0:33:13.23:0,13,172	0/0:28,0:27:50.22:0,50,209	0/0:19,0:19:20.40:0,20,61	0/0:37,0:37:32.25:0,32,331	0/0:22,0:22:29.26:0,29,111	0/0:21,0:21:41.92:0,42,164	0/0:24,0:24:27.37:0,27,126	0/0:23,0:23:44.77:0,45,217	0/0:20,0:20:29.58:0,30,116	0/0:13,0:13:20.48:0,20,65	0/0:25,0:25:45.03:0,45,157	0/0:21,0:21:29.02:0,29,101	0/0:26,0:26:78.07:0,78,1111	0/0:21,0:21:27.06:0,27,88	0/0:20,0:20:26.86:0,27,173	0/0:24,0:24:39.01:0,39,146	0/0:12,0:12:17.70:0,18,56	0/0:21,0:21:62.14:0,62,848	0/0:22,0:22:66.11:0,66,912	0/0:11,0:11:30.04:0,30,445	0/0:29,0:29:17.20:0,17,96	0/0:23,0:22:24.45:0,24,162	0/0:34,0:32:28.69:0,29,95	0/0:9,0:9:14.62:0,15,72
chr10	79061410	.	T	TG	622.30	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=3.132;DP=359;FS=2.179;HRun=0;HaplotypeScore=95.6753;InbreedingCoeff=0.6335;MQ=73.20;MQ0=1;MQRankSum=-0.212;QD=20.07;ReadPosRankSum=-0.993;VQSLOD=4.9117;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:47.99:716,48,0	0/0:7,0:7:21.07:0,21,293	0/0:11,0:10:30.10:0,30,420	0/1:10,0:8:4.86:5,0,221	0/0:15,0:15:41.53:0,42,491	0/0:13,0:13:39.11:0,39,527	0/0:6,0:6:18.06:0,18,250	0/0:47,0:47:99:0,132,1749	0/0:13,0:13:39.13:0,39,544	0/0:12,0:12:36.12:0,36,503	0/0:14,0:14:42.14:0,42,585	0/0:14,0:14:39.13:0,39,556	0/0:6,0:6:18.06:0,18,252	0/0:8,0:8:24.08:0,24,335	0/0:15,0:15:36.08:0,36,481	0/0:15,0:15:45.15:0,45,627	0/0:18,0:18:51.15:0,51,695	0/0:13,0:13:36.12:0,36,503	0/0:13,0:13:38.34:0,38,510	0/0:14,0:14:39.13:0,39,544	0/0:4,0:4:9.03:0,9,126	0/0:4,0:4:12.04:0,12,168	0/0:4,0:4:12.03:0,12,151	0/0:8,0:8:15.05:0,15,210	0/0:19,0:19:44.90:0,45,576	0/0:13,0:13:39.13:0,39,540	0/0:13,0:12:39.10:0,39,520	0/0:9,0:9:27.09:0,27,378
chr10	79061420	.	TATAATAATAATA	T	5052.35	PASS	AB=0.881;AC=30;AF=0.682;AN=44;BaseQRankSum=3.885;DP=293;FS=0.000;HRun=0;HaplotypeScore=131.9334;InbreedingCoeff=0.5579;MQ=65.45;MQ0=1;MQRankSum=-5.174;QD=23.83;ReadPosRankSum=-2.397;VQSLOD=3.5766;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:13:60.81:61,0,383	1/1:3,2:5:6.02:160,6,0	./.	./.	1/1:8,5:13:14.94:385,15,0	0/0:12,0:12:17.28:0,17,292	0/0:5,0:5:3.01:0,3,48	1/1:37,0:37:12.29:196,12,0	0/0:10,0:10:5.82:0,6,432	1/1:7,4:11:23.87:535,24,0	1/1:12,2:14:20.65:281,21,0	0/1:8,0:10:16.99:17,0,154	./.	0/0:6,0:6:3.01:0,3,94	1/1:4,8:12:15.05:479,15,0	1/1:10,3:13:11.96:317,12,0	0/0:18,0:18:39.10:0,39,1764	1/1:10,1:11:3.01:104,3,0	1/1:11,3:14:12.01:328,12,0	1/1:7,2:9:12.01:243,12,0	./.	./.	./.	0/0:2,0:6:3.01:0,3,157	1/1:3,14:17:30.10:964,30,0	1/1:7,5:12:18.05:500,18,0	1/1:8,4:11:12.04:392,12,0	1/1:9,0:9:11.95:92,12,0
chr10	79061469	.	GCAACAATAATAACAATAA	G	11639.18	PASS	AC=42;AF=0.778;AN=54;BaseQRankSum=8.643;DP=262;FS=7.610;HRun=0;HaplotypeScore=167.1488;InbreedingCoeff=0.7563;MQ=53.03;MQ0=0;MQRankSum=-7.193;QD=57.05;ReadPosRankSum=3.538;VQSLOD=3.7773;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,2:9:15.05:538,15,0	1/1:1,1:3:6.02:276,6,0	0/0:15,0:11:31.92:0,32,1515	0/0:9,0:7:21.07:0,21,1228	1/1:5,12:18:11.97:441,12,0	1/1:2,0:9:17.80:644,18,0	./.	1/1:17,21:38:60.12:1255,60,0	1/1:3,0:11:24.08:890,24,0	1/1:3,13:16:27.05:742,27,0	1/1:1,10:11:3.01:150,3,0	1/1:0,0:4:9.03:335,9,0	1/1:1,0:2:3.01:101,3,0	1/1:1,0:3:6.02:243,6,0	1/1:5,2:9:12.04:544,12,0	1/1:1,2:4:9.03:426,9,0	0/0:19,0:19:54.19:0,54,3760	1/1:0,1:5:6.02:279,6,0	1/1:3,8:11:24.04:840,24,0	1/1:1,7:9:9.03:328,9,0	1/1:3,0:4:3.01:125,3,0	0/0:6,0:6:18.06:0,18,819	0/0:4,0:4:12.04:0,12,608	0/0:5,0:5:15.05:0,15,910	1/1:5,5:14:27.09:1230,27,0	1/1:3,7:12:20.58:933,21,0	1/1:2,2:11:27.09:1191,27,0	1/1:0,0:1:3.01:128,3,0
chr10	79061476	.	TAATAAC	T	3805.16	PASS	AB=0.835;AC=38;AF=0.679;AN=56;BaseQRankSum=10.425;DP=286;FS=15.224;HRun=0;HaplotypeScore=141.1129;InbreedingCoeff=0.4817;MQ=58.96;MQ0=0;MQRankSum=-8.417;QD=17.54;ReadPosRankSum=6.124;VQSLOD=2.0272;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,2:8:6.05:95,0,6	1/1:3,1:4:6.02:96,6,0	0/0:18,0:14:37.81:0,38,968	0/0:12,0:10:26.80:0,27,727	1/1:17,1:18:9.03:136,9,0	1/1:3,7:10:20.38:363,20,0	0/0:1,0:1:0.47:0,0,1	0/1:36,0:36:99:113,0,130	1/1:2,8:10:24.08:394,24,0	1/1:16,0:16:12.98:197,13,0	1/1:11,0:11:3.01:42,3,0	1/1:1,4:5:9.03:159,9,0	1/1:1,1:2:3.01:50,3,0	1/1:1,2:3:6.02:105,6,0	1/1:8,2:10:11.50:187,11,0	0/1:6,1:7:7.95:126,0,8	0/0:20,0:20:54.19:0,54,1747	1/1:5,2:7:5.48:95,5,0	1/1:10,0:10:3.65:235,4,0	1/1:8,1:9:6.02:96,6,0	1/1:7,1:8:3.48:54,3,0	0/0:6,0:6:18.06:0,18,603	0/0:6,0:6:18.06:0,18,569	0/0:6,0:6:18.06:0,18,606	1/1:11,4:15:27.09:407,27,0	1/1:10,2:12:21.04:359,21,0	1/1:7,7:14:11:446,11,0	0/1:1,1:2:13.97:49,0,14
chr10	79061675	.	G	GC	1137.66	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=2.304;DP=518;FS=1.153;HRun=10;HaplotypeScore=64.9840;InbreedingCoeff=0.7966;MQ=73.96;MQ0=0;MQRankSum=-2.478;QD=10.25;ReadPosRankSum=-1.593;VQSLOD=2.4114;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:71.82:0,72,590	0/0:9,0:9:26.95:0,27,219	0/1:21,0:18:27.12:27,0,65	0/0:18,0:17:1.57:0,2,100	0/0:14,0:14:32.94:0,33,271	1/1:2,17:19:47.24:504,47,0	1/1:7,9:16:5.59:214,6,0	0/0:20,1:21:32.91:0,33,268	1/1:4,16:21:22.02:407,22,0	0/0:19,0:19:41.89:0,42,338	0/0:20,0:20:44.77:0,45,359	1/1:0,1:7:11.56:75,12,0	1/1:5,0:16:11.40:57,11,0	1/1:5,0:11:5.68:28,6,0	0/0:22,0:22:44.90:0,45,369	0/0:34,1:35:60.94:0,61,704	0/0:27,0:30:75.95:0,76,600	0/0:18,0:18:50.94:0,51,419	0/0:17,0:19:34.19:0,34,256	0/0:13,0:13:29.94:0,30,246	0/0:21,0:22:49.20:0,49,391	0/0:9,0:9:17.98:0,18,148	0/0:8,0:8:17.98:0,18,148	0/0:34,0:35:99:0,101,813	0/0:16,0:17:40.82:0,41,315	0/0:15,0:15:26.93:0,27,221	0/0:22,0:22:47.59:0,48,393	0/0:9,0:9:26.96:0,27,219
chr10	79061879	.	A	AAGCGTTCTTATAAAAAGCTGTC	9317.76	PASS	AB=0.697;AC=48;AF=0.960;AN=50;BaseQRankSum=-2.989;DP=95;FS=5.494;HRun=0;HaplotypeScore=58.4150;InbreedingCoeff=-0.1249;MQ=112.55;MQ0=0;MQRankSum=-2.908;QD=100.19;ReadPosRankSum=-0.456;VQSLOD=3.7395;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:9.03:351,9,0	1/1:2,0:2:3.01:89,3,0	0/1:3,1:8:17.51:1354,0,18	0/1:5,0:7:12.63:720,0,13	1/1:3,0:3:9.02:239,9,0	./.	1/1:5,0:5:15.05:517,15,0	1/1:6,0:6:18.06:687,18,0	1/1:4,0:4:12.04:557,12,0	1/1:1,0:1:3.01:58,3,0	1/1:2,0:2:6.02:221,6,0	1/1:3,0:3:5.95:185,6,0	1/1:2,0:2:5.97:46,6,0	1/1:3,0:3:9.03:317,9,0	1/1:7,0:7:21:473,21,0	1/1:4,0:4:12.04:489,12,0	1/1:4,0:4:12.04:366,12,0	1/1:2,0:2:6.02:160,6,0	1/1:1,0:1:3.01:149,3,0	1/1:7,0:7:15.05:590,15,0	1/1:1,0:1:3.01:49,3,0	1/1:1,0:1:3.01:106,3,0	1/1:2,0:2:6.01:165,6,0	1/1:1,0:1:3.01:88,3,0	./.	1/1:7,0:7:21.06:650,21,0	1/1:6,0:6:18.06:691,18,0	./.
chr10	79062237	.	G	GA	4660.35	PASS	AB=0.857;AC=27;AF=0.482;AN=56;BaseQRankSum=-8.772;DP=539;FS=10.276;HRun=11;HaplotypeScore=77.3441;InbreedingCoeff=0.6323;MQ=75.86;MQ0=1;MQRankSum=1.862;QD=14.08;ReadPosRankSum=-1.793;VQSLOD=3.7970;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:24:53.89:0,54,389	0/1:4,6:11:19.59:169,0,20	0/0:27,0:25:7.17:0,7,158	0/1:9,0:7:1.14:6,0,1	1/1:9,26:35:39.85:575,40,0	0/0:17,0:16:26.78:0,27,209	0/1:8,1:9:3.49:3,0,159	1/1:7,12:19:12.81:304,13,0	0/0:14,0:14:29.83:0,30,232	1/1:12,15:27:15.84:337,16,0	1/1:3,11:14:27.05:274,27,0	0/0:3,0:10:14.71:0,15,42	0/0:2,0:10:19.97:0,20,77	0/0:2,0:3:2.03:0,2,6	1/1:6,21:28:50.94:502,51,0	1/1:4,21:25:27.88:465,28,0	0/0:15,0:16:46.85:0,47,351	0/0:19,0:20:49.85:0,50,377	1/1:7,9:17:26.22:299,26,0	1/1:3,21:24:53.99:515,54,0	1/1:4,8:12:0.83:190,1,0	0/1:17,2:19:13.06:13,0,273	0/0:21,0:22:46.77:0,47,348	0/1:17,3:19:10.09:10,0,295	1/1:7,24:31:16.63:521,17,0	0/0:30,1:34:52.79:0,53,538	1/1:4,25:30:26.86:478,27,0	0/0:9,0:9:23.90:0,24,186
chr10	79062810	.	C	CAG	18157.57	PASS	AB=0.587;AC=43;AF=0.768;AN=56;BaseQRankSum=-11.138;DP=633;FS=4.160;HRun=0;HaplotypeScore=75.1057;InbreedingCoeff=0.9085;MQ=72.98;MQ0=3;MQRankSum=-1.512;QD=37.13;ReadPosRankSum=2.511;VQSLOD=7.2515;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,29:31:81.28:1355,81,0	1/1:1,9:10:24.08:390,24,0	0/0:18,0:18:32.99:0,33,377	0/0:16,0:17:10.88:0,11,243	1/1:5,14:20:33.11:552,33,0	1/1:4,13:17:36.12:602,36,0	1/1:4,17:21:48.16:803,48,0	1/1:6,23:29:69.18:1051,69,0	1/1:6,22:28:63.22:1053,63,0	1/1:6,14:20:45.14:724,45,0	1/1:1,9:10:21.07:351,21,0	1/1:4,19:23:51.17:852,51,0	1/1:5,27:32:66.23:1101,66,0	0/1:8,19:27:1.49:886,0,1	1/1:8,17:25:42.14:702,42,0	1/1:2,22:23:60.21:1003,60,0	0/0:42,0:42:99:0,105,1289	1/1:1,38:39:99:1847,111,0	1/1:6,15:21:45.13:726,45,0	1/1:2,4:6:9.03:150,9,0	1/1:5,28:34:81.28:1355,81,0	0/0:14,0:14:24.06:0,24,292	0/0:14,0:14:36.12:0,36,458	0/0:38,0:38:99:0,102,1270	1/1:2,14:16:42.14:703,42,0	1/1:10,18:28:60.21:999,60,0	1/1:3,19:23:48.16:802,48,0	1/1:0,3:3:9.03:151,9,0
chr10	79063029	.	A	AT	15003.95	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=15.643;DP=525;FS=6.276;HRun=1;HaplotypeScore=170.3713;InbreedingCoeff=0.9920;MQ=77.15;MQ0=0;MQRankSum=-15.160;QD=37.05;ReadPosRankSum=2.095;VQSLOD=4.0584;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:75.12:1025,75,0	1/1:1,8:9:24.04:333,24,0	0/0:15,0:15:42.61:0,43,546	0/0:21,0:22:51.41:0,51,666	1/1:2,19:21:48.16:716,48,0	1/1:0,19:19:51:685,51,0	1/1:3,18:21:51.09:711,51,0	1/1:6,21:27:75.19:1069,75,0	1/1:1,13:14:30.10:439,30,0	1/1:3,14:17:48.13:675,48,0	1/1:0,8:8:21.07:313,21,0	1/1:1,25:26:60.10:844,60,0	1/1:1,33:34:96.32:1425,96,0	1/1:0,12:12:33.11:489,33,0	1/1:0,17:17:45.15:671,45,0	1/1:1,24:25:66.22:976,66,0	0/0:27,0:27:78.21:0,78,981	1/1:1,11:12:36.12:538,36,0	1/1:3,12:15:42.14:609,42,0	1/1:2,10:12:29.97:394,30,0	1/1:2,9:11:12:154,12,0	0/0:21,0:21:63.19:0,63,803	0/0:18,0:18:54.16:0,54,686	0/0:17,0:17:51.12:0,51,641	1/1:0,23:23:54.18:806,54,0	1/1:1,21:22:63.20:921,63,0	1/1:0,21:21:54.18:806,54,0	1/1:0,9:9:27.09:403,27,0
chr10	79063492	.	A	AT	2154.45	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-2.602;DP=672;FS=0.000;HRun=9;HaplotypeScore=93.2507;InbreedingCoeff=0.9633;MQ=82.38;MQ0=0;MQRankSum=-1.855;QD=25.35;ReadPosRankSum=1.013;VQSLOD=3.6444;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:37:65.18:0,65,191	0/0:14,0:14:41.99:0,42,362	0/0:20,0:20:53.78:0,54,453	0/0:17,0:17:40.37:0,40,320	0/0:21,3:24:29.75:0,30,483	1/1:3,24:27:66.18:730,66,0	1/1:7,23:30:40.12:671,40,0	0/0:32,0:32:68.97:0,69,597	1/1:1,27:28:81.22:896,81,0	0/0:29,1:30:77.98:0,78,677	0/0:20,0:20:47.08:0,47,411	0/0:33,0:33:95.98:0,96,834	0/0:23,0:23:62.98:0,63,547	0/0:14,0:14:38.95:0,39,328	0/0:28,0:27:77.96:0,78,674	0/0:23,0:23:65.99:0,66,573	0/0:37,0:37:99:0,108,938	0/0:20,0:20:50.98:0,51,443	0/0:18,0:18:38.97:0,39,335	0/0:22,0:22:56.95:0,57,487	0/0:15,0:15:44.97:0,45,387	0/0:17,0:18:47.03:0,47,397	0/0:21,0:21:50.93:0,51,434	0/0:41,0:41:99:0,111,950	0/0:18,0:18:50.95:0,51,433	0/0:20,0:20:53.93:0,54,462	0/0:39,0:39:99:0,111,958	0/0:3,0:3:6:0,6,52
chr10	79064419	.	ACGAATGAGAGGGTTTTTTTTTTT	A	43667.02	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=14.433;DP=565;FS=0.000;HRun=0;HaplotypeScore=371.6169;InbreedingCoeff=0.9417;MQ=71.17;MQ0=0;MQRankSum=-14.892;QD=110.83;ReadPosRankSum=7.111;VQSLOD=3.3919;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,18:31:42.14:2615,42,0	1/1:0,5:5:12.04:771,12,0	0/0:26,0:25:56.08:0,56,2275	0/0:24,0:23:54.15:0,54,2847	1/1:4,21:25:54.14:3244,54,0	1/1:3,13:16:30.10:1926,30,0	1/1:8,10:18:24.08:1502,24,0	1/1:8,9:17:24.07:999,24,0	1/1:4,11:15:27.09:1734,27,0	1/1:4,13:17:39.13:2434,39,0	1/1:4,7:11:15.05:962,15,0	1/1:6,14:20:39.13:2504,39,0	1/1:7,13:20:39.13:2504,39,0	1/1:7,19:26:54.19:3467,54,0	1/1:9,18:27:42.14:2697,42,0	1/1:5,15:20:42.14:2697,42,0	0/0:51,0:51:99:0,150,13258	1/1:5,7:12:21.07:1349,21,0	1/1:3,4:7:12.01:435,12,0	1/1:6,14:20:42.14:2684,42,0	1/1:8,2:10:6.02:385,6,0	0/0:21,0:21:60.19:0,60,5501	0/0:25,0:25:75.21:0,75,6230	0/0:23,0:23:69.22:0,69,6921	1/1:8,17:25:36.12:2300,36,0	1/1:7,19:26:57.20:3569,57,0	1/1:5,17:22:39.13:2503,39,0	1/1:2,2:4:6.02:385,6,0
chr10	79066022	.	CCCCCGCG	C	1963.89	PASS	AB=1.000;AC=34;AF=0.944;AN=36;BaseQRankSum=-3.517;DP=65;FS=8.313;HRun=0;HaplotypeScore=25.2415;InbreedingCoeff=0.0164;MQ=93.47;MQ0=0;MQRankSum=-3.863;QD=34.45;ReadPosRankSum=-1.403;VQSLOD=1.1074;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:7,0:6:0:0,0,166	0/1:5,0:4:8.69:9,0,131	./.	1/1:0,2:2:3.01:82,3,0	1/1:0,4:4:9.03:245,9,0	1/1:1,3:4:5.65:30,6,0	1/1:0,2:2:3.01:83,3,0	1/1:0,4:4:12:180,12,0	./.	1/1:2,0:2:5.99:50,6,0	1/1:0,2:2:3.01:82,3,0	1/1:0,3:3:9.03:247,9,0	1/1:0,2:2:3.01:82,3,0	1/1:0,4:4:6.02:158,6,0	1/1:0,3:3:6.02:163,6,0	./.	1/1:0,4:4:12.04:324,12,0	1/1:0,2:2:3.01:82,3,0	./.	./.	./.	1/1:0,2:2:3.01:82,3,0	1/1:0,3:3:3.01:74,3,0	1/1:0,2:2:3.01:82,3,0	./.	./.
chr10	79066192	.	TG	T	1914.83	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.194;DP=364;FS=41.209;HRun=5;HaplotypeScore=45.7701;InbreedingCoeff=0.9641;MQ=93.31;MQ0=0;MQRankSum=-2.748;QD=26.97;ReadPosRankSum=2.623;VQSLOD=1.0450;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.19:0,57,774	1/1:1,4:5:12.03:136,12,0	0/0:17,0:17:48.09:0,48,602	0/0:22,0:21:57.17:0,57,732	1/1:1,9:10:27.08:306,27,0	0/0:8,0:8:21.03:0,21,266	0/0:19,0:19:57.19:0,57,776	0/0:13,0:13:33.11:0,33,449	0/0:14,0:14:36.12:0,36,492	1/1:0,4:4:12.03:136,12,0	1/1:0,10:10:27.08:306,27,0	0/0:14,0:14:36.10:0,36,461	0/0:10,0:10:27.09:0,27,369	0/0:16,0:16:48.16:0,48,656	1/1:0,19:19:54.15:613,54,0	1/1:0,12:12:30.09:341,30,0	0/0:26,0:26:78.26:0,78,1067	0/0:19,0:19:57.17:0,57,756	0/0:11,0:11:30.10:0,30,410	0/0:8,0:8:21.07:0,21,287	0/0:11,0:11:30.08:0,30,391	0/0:5,0:5:15.05:0,15,205	0/0:16,0:16:45.15:0,45,612	0/0:20,0:20:60.13:0,60,766	1/1:1,10:11:24.07:272,24,0	0/0:13,0:13:36.11:0,36,478	0/0:9,0:9:27.09:0,27,369	0/0:3,0:3:6.02:0,6,82
chr10	79066785	.	C	CA	3945.25	PASS	AB=0.815;AC=18;AF=0.321;AN=56;BaseQRankSum=-12.506;DP=608;FS=9.103;HRun=10;HaplotypeScore=85.1033;InbreedingCoeff=0.8262;MQ=80.07;MQ0=3;MQRankSum=0.396;QD=18.18;ReadPosRankSum=-1.090;VQSLOD=3.3816;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:80.87:0,81,660	0/0:8,0:8:20.97:0,21,172	0/0:36,0:27:38.37:0,38,296	0/1:25,0:19:38.63:43,0,39	0/0:19,0:19:44.94:0,45,369	0/0:26,1:27:36.89:0,37,504	0/0:20,0:21:46.91:0,47,369	1/1:7,24:32:75.02:782,75,0	0/0:20,0:20:47.86:0,48,384	0/0:20,0:20:45.82:0,46,370	0/0:17,0:17:42.77:0,43,344	1/1:4,8:12:18.05:192,18,0	1/1:4,18:22:11.44:327,11,0	1/1:4,15:19:17.46:383,17,0	0/0:16,0:16:35.96:0,36,295	0/0:23,0:23:53.21:0,53,503	0/0:34,0:35:92.44:0,92,749	1/1:4,22:28:26.19:452,26,0	1/1:6,14:20:27.19:415,27,0	1/1:4,23:28:68.94:695,69,0	0/1:3,3:6:34.25:81,0,34	0/0:16,0:17:34.98:0,35,277	0/0:26,1:27:30.91:0,31,458	0/0:18,0:18:43.99:0,44,351	0/0:19,0:19:41.54:0,42,330	0/0:7,0:23:35.58:0,36,120	1/1:2,22:24:53.93:576,54,0	0/0:0,0:12:24.44:0,24,71
chr10	79068060	.	G	GGT	913.35	PASS	AB=1.000;AC=28;AF=0.933;AN=30;BaseQRankSum=-3.019;DP=49;FS=1.817;HRun=0;HaplotypeScore=22.2251;InbreedingCoeff=-0.2350;MQ=169.73;MQ0=2;MQRankSum=0.503;QD=19.43;ReadPosRankSum=-2.104;VQSLOD=2.9640;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:2.94:18,3,0	./.	0/1:15,0:13:4.32:308,0,4	0/1:10,0:10:29.53:182,0,30	1/1:0,1:1:3.01:58,3,0	1/1:0,3:4:3.01:56,3,0	1/1:0,0:1:2.97:20,3,0	1/1:2,0:2:5.99:50,6,0	./.	1/1:1,0:1:3.01:54,3,0	./.	1/1:1,0:1:3.01:50,3,0	./.	1/1:0,1:2:2.97:20,3,0	./.	1/1:0,1:1:3.01:57,3,0	./.	1/1:0,1:1:2.98:21,3,0	./.	1/1:1,0:1:3:26,3,0	1/1:2,0:2:2.98:21,3,0	./.	./.	./.	./.	./.	1/1:0,2:2:3.01:57,3,0	./.
chr10	79069584	.	G	GCTAC	30557.91	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-13.938;DP=636;FS=4.308;HRun=0;HaplotypeScore=84.5306;InbreedingCoeff=0.9994;MQ=71.87;MQ0=0;MQRankSum=-5.542;QD=62.75;ReadPosRankSum=1.920;VQSLOD=6.7181;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:20:42.08:1078,42,0	1/1:1,18:18:51.18:1395,51,0	0/0:14,0:14:32.28:0,32,585	0/0:12,0:12:27.08:0,27,470	1/1:1,22:23:54.19:1468,54,0	0/0:29,0:28:87.30:0,87,1664	0/0:13,0:13:39.13:0,39,756	1/1:9,20:34:96.28:2290,96,0	1/1:0,17:17:48.16:1314,48,0	1/1:3,17:21:51.18:1346,51,0	1/1:3,11:18:33.11:897,33,0	1/1:3,33:36:96.33:2602,96,0	1/1:2,17:20:48.16:1270,48,0	1/1:1,20:22:60.21:1608,60,0	1/1:2,34:39:93.32:2513,93,0	1/1:1,31:31:78.27:2135,78,0	0/0:14,0:14:42.13:0,42,779	1/1:1,23:25:66.17:1745,66,0	1/1:6,14:22:45.11:1113,45,0	1/1:4,16:26:54.14:1397,54,0	1/1:3,12:16:27.05:678,27,0	0/0:22,0:22:63.20:0,63,1187	0/0:21,0:21:54.13:0,54,1007	0/0:24,0:24:72.23:0,72,1337	1/1:0,14:21:36.06:911,36,0	1/1:1,26:29:84.25:2182,84,0	1/1:2,27:29:69.24:1888,69,0	1/1:0,12:12:30.05:731,30,0
chr10	79070792	.	C	CG	14494.08	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-15.704;DP=634;FS=5.368;HRun=0;HaplotypeScore=55.6710;InbreedingCoeff=0.9993;MQ=77.32;MQ0=0;MQRankSum=-3.328;QD=44.87;ReadPosRankSum=1.619;VQSLOD=5.0494;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,43:45:99:1981,126,0	0/0:8,0:8:21.07:0,21,294	0/0:26,0:26:74.72:0,75,986	0/0:22,0:23:55.72:0,56,809	0/0:21,0:21:63.19:0,63,862	0/0:25,0:25:75.24:0,75,1033	0/0:23,0:23:69.23:0,69,964	1/1:1,31:32:90.31:1436,90,0	1/1:0,23:23:63.21:1005,63,0	0/0:15,0:15:45.12:0,45,607	0/0:17,0:17:51.17:0,51,713	1/1:1,21:22:66.22:1036,66,0	1/1:0,24:24:72.25:1149,72,0	1/1:0,26:27:72.24:1137,72,0	0/0:38,0:38:99:0,108,1460	0/0:25,0:25:72.24:0,72,1007	0/0:30,0:30:90.21:0,90,1198	1/1:1,24:25:66.22:1038,66,0	1/1:0,14:14:42.14:670,42,0	1/1:1,18:19:54.18:845,54,0	1/1:1,24:25:69.24:1101,69,0	0/0:11,0:11:30.09:0,30,402	0/0:12,0:12:36.11:0,36,486	0/0:14,0:14:36.10:0,36,485	0/0:23,0:23:69.21:0,69,932	1/1:0,29:29:84.19:1278,84,0	1/1:0,21:21:63.21:1004,63,0	1/1:0,17:17:51.17:814,51,0
chr10	79072470	.	GGTGT	G	2984.24	PASS	AB=0.852;AC=34;AF=0.630;AN=54;BaseQRankSum=8.230;DP=487;FS=16.254;HRun=0;HaplotypeScore=104.1254;InbreedingCoeff=0.6118;MQ=63.82;MQ0=13;MQRankSum=-5.597;QD=9.47;ReadPosRankSum=1.574;VQSLOD=1.5062;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:18:9.01:84,9,0	1/1:5,5:10:4.94:53,5,0	./.	0/0:26,0:17:3.01:0,3,34	1/1:7,4:12:10.22:98,10,0	0/0:19,0:19:31.46:0,31,696	0/0:17,0:20:23.82:0,24,458	1/1:26,4:30:9.08:146,9,0	1/1:7,0:16:24.03:223,24,0	1/1:14,7:21:18.05:255,18,0	1/1:8,2:11:15.04:197,15,0	1/1:6,0:11:15.02:140,15,0	1/1:8,0:19:33.04:307,33,0	1/1:8,0:16:21.45:185,21,0	1/1:10,5:15:15.05:235,15,0	1/1:5,7:14:18.05:244,18,0	0/0:23,0:23:29.57:0,30,517	0/1:18,0:22:5.42:5,0,448	1/1:15,5:21:22.34:291,22,0	1/1:11,2:15:9.02:122,9,0	0/1:17,4:20:19.81:212,0,20	0/1:9,0:9:33.51:34,0,201	0/0:10,0:10:15.05:0,15,345	0/0:18,0:21:38.85:0,39,748	1/1:3,0:12:18.02:167,18,0	0/0:15,0:20:26.95:0,27,365	0/1:11,7:18:24:185,0,24	0/0:18,0:18:32.93:0,33,540
chr10	79072669	.	G	GA	607.06	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=-4.431;DP=342;FS=11.047;HRun=8;HaplotypeScore=38.5595;InbreedingCoeff=0.9109;MQ=73.82;MQ0=0;MQRankSum=-1.220;QD=23.35;ReadPosRankSum=0.762;VQSLOD=3.2744;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.03:0,54,494	0/0:4,0:4:12.01:0,12,110	0/0:10,0:10:17.85:0,18,157	0/0:12,0:10:17.98:0,18,155	0/0:8,0:8:24.01:0,24,220	0/0:16,0:16:39:0,39,352	0/0:6,0:6:15.01:0,15,137	0/0:30,0:30:80.99:0,81,731	0/0:9,0:9:21.90:0,22,194	0/0:15,0:15:45.02:0,45,412	0/0:8,0:8:18.01:0,18,165	0/0:14,0:14:36:0,36,325	0/0:12,0:12:27.01:0,27,247	0/0:12,0:12:30.01:0,30,275	0/0:9,0:9:27:0,27,242	0/0:7,0:6:12:0,12,110	0/0:22,0:22:48.01:0,48,439	0/0:21,0:21:41.78:0,42,454	0/0:14,0:14:36.01:0,36,329	0/0:10,0:10:27.01:0,27,246	0/0:7,0:7:18.01:0,18,165	./.	0/0:3,0:3:9:0,9,82	0/0:19,0:19:22.85:0,23,289	0/0:12,0:12:33:0,33,298	1/1:3,14:17:42.12:485,42,0	0/0:15,0:15:39.02:0,39,357	1/1:2,7:9:21.06:242,21,0
chr10	79072759	.	CA	C	544.37	PASS	AB=0.686;AC=14;AF=0.259;AN=54;BaseQRankSum=4.571;DP=306;FS=0.000;HRun=13;HaplotypeScore=35.2995;InbreedingCoeff=0.6177;MQ=56.26;MQ0=9;MQRankSum=-0.265;QD=6.26;ReadPosRankSum=3.789;VQSLOD=0.9826;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,1:21:23.32:81,23,0	0/0:8,0:8:15:0,15,136	0/0:12,0:4:12:0,12,108	0/0:17,1:5:8.96:0,9,75	0/0:9,2:11:3.05:0,3,175	0/0:14,0:14:30.04:0,30,288	0/0:5,0:5:14.98:0,15,135	0/0:20,0:20:39.01:0,39,363	1/1:2,0:5:6.10:18,6,0	0/0:8,0:8:15.01:0,15,139	0/0:13,0:13:12.85:0,13,263	1/1:1,11:12:32.81:241,33,0	0/1:1,6:7:12.91:54,0,13	1/1:5,7:13:6.32:102,6,0	0/1:4,1:5:15.90:16,0,23	0/0:8,0:7:18.03:0,18,175	0/0:18,1:23:25.98:0,26,390	1/1:5,10:17:16.38:191,16,0	0/0:12,1:13:5.22:0,5,202	0/0:6,0:6:12.02:0,12,117	0/0:5,0:5:8.80:0,9,63	./.	0/0:2,0:2:3:0,3,29	0/0:6,0:7:14.86:0,15,131	1/1:3,0:7:4.04:12,4,0	0/0:8,0:13:17.44:0,17,110	0/0:15,1:14:14.12:0,14,284	0/0:6,0:16:31.41:0,31,171
chr10	79072930	.	G	GTA	1642.93	PASS	AB=0.633;AC=30;AF=0.625;AN=48;BaseQRankSum=5.287;DP=300;FS=1.670;HRun=0;HaplotypeScore=61.5616;InbreedingCoeff=0.5062;MQ=80.63;MQ0=6;MQRankSum=-3.648;QD=9.96;ReadPosRankSum=-1.326;VQSLOD=3.0170;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:0,0:5:13.86:0,14,65	1/1:5,0:5:2.98:23,3,0	0/0:29,0:12:2.38:0,2,34	0/0:59,0:20:7.99:0,8,77	1/1:7,0:7:11.95:93,12,0	0/0:9,0:9:9.03:0,9,108	./.	1/1:49,0:49:85.64:615,86,0	0/0:3,0:3:3.01:0,3,36	1/1:9,0:9:6.24:21,6,0	1/1:14,0:14:23.92:187,24,0	1/1:0,2:2:6.02:96,6,0	0/1:2,2:4:29.94:41,0,30	0/0:2,0:2:0:0,0,0	1/1:3,0:3:2.99:23,3,0	1/1:4,0:4:5.98:46,6,0	0/0:15,0:15:33.10:0,33,393	0/0:9,0:11:22.09:0,22,216	1/1:23,0:22:26.08:196,26,0	1/1:9,0:9:8.97:69,9,0	1/1:2,0:2:5.98:46,6,0	./.	./.	./.	0/1:3,6:9:56.52:128,0,57	1/1:9,0:9:3.48:12,3,0	1/1:6,0:6:2.99:23,3,0	1/1:1,0:10:21:185,21,0
chr10	79072937	.	T	TATAC	6052.17	PASS	AB=0.800;AC=25;AF=0.543;AN=46;BaseQRankSum=-7.598;DP=323;FS=4.779;HRun=0;HaplotypeScore=61.7629;InbreedingCoeff=0.6206;MQ=83.71;MQ0=7;MQRankSum=-1.485;QD=38.55;ReadPosRankSum=1.497;VQSLOD=4.7281;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:18.03:0,18,185	1/1:0,5:5:3.01:80,3,0	0/0:37,0:14:5.74:0,6,93	0/0:67,0:24:12.40:0,12,138	1/1:2,7:10:12.04:323,12,0	0/0:9,0:9:24.01:0,24,295	./.	1/1:7,44:53:99:2661,138,0	0/0:2,0:2:5.99:0,6,79	1/1:9,0:9:24.05:332,24,0	1/1:1,13:14:24.08:642,24,0	0/0:3,0:3:0.14:0,0,20	0/0:4,0:4:1.82:0,2,55	./.	1/1:0,3:5:3.01:81,3,0	1/1:0,4:6:6.02:162,6,0	0/0:16,0:16:48.04:0,48,739	0/0:11,0:11:30.03:0,30,425	1/1:4,14:18:40.18:922,40,0	1/1:0,8:8:9.03:243,9,0	1/1:0,3:3:6.02:162,6,0	./.	./.	./.	0/0:8,0:8:2.38:0,2,100	0/1:6,1:8:58.47:58,0,88	1/1:1,6:7:3.01:81,3,0	1/1:10,0:10:21.07:304,21,0
chr10	79074031	.	A	ATTTGTGTGTGTGTG	2265.38	PASS	AB=0.983;AC=20;AF=0.357;AN=56;BaseQRankSum=7.124;DP=592;FS=7.530;HRun=0;HaplotypeScore=214.8085;InbreedingCoeff=-0.2864;MQ=61.75;MQ0=4;MQRankSum=-7.757;QD=7.06;ReadPosRankSum=0.971;VQSLOD=1.4234;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:41:71.91:257,0,72	1/1:3,0:3:3.01:183,3,0	0/0:24,0:15:18.92:0,19,196	0/0:21,0:14:22.47:0,22,246	0/0:23,0:22:6.01:0,6,191	0/0:30,0:30:75.12:0,75,1593	0/0:43,0:43:11.39:0,11,1482	0/1:34,0:33:42.95:43,0,355	0/1:16,0:14:0.29:0,0,91	0/1:13,0:13:30.80:222,0,31	0/1:7,4:11:25.44:176,0,25	0/1:14,0:14:10.68:11,0,101	0/1:17,0:17:39.54:40,0,71	0/1:17,0:17:7.65:8,0,117	0/1:23,0:23:55.86:298,0,56	0/1:8,0:7:31.98:53,0,32	0/0:39,0:39:84.17:0,84,2202	0/1:18,0:18:35.10:35,0,159	0/1:21,0:21:99:168,0,176	0/1:18,0:18:79.81:349,0,80	0/1:20,0:17:49.97:98,0,50	0/0:15,0:15:39.09:0,39,745	0/0:20,0:20:51.53:0,52,1233	0/0:38,0:38:83.80:0,84,2105	0/0:18,0:18:9.26:0,9,77	0/1:16,0:16:99:105,0,102	0/1:27,0:27:99:158,0,146	1/1:4,0:4:6.02:223,6,0
chr10	79074033	.	T	TTGTGTGTGTGTGTG	8448.02	PASS	AB=0.822;AC=38;AF=0.731;AN=52;BaseQRankSum=1.169;DP=687;FS=1.598;HRun=0;HaplotypeScore=250.2134;InbreedingCoeff=0.5234;MQ=56.83;MQ0=5;MQRankSum=-9.141;QD=17.03;ReadPosRankSum=-2.455;VQSLOD=3.5252;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:48,0:47:29.98:654,30,0	1/1:4,1:5:3.01:201,3,0	./.	./.	1/1:29,0:28:15.02:406,15,0	0/0:29,0:32:60.11:0,60,1396	0/1:38,0:42:32:32,0,1176	1/1:39,0:38:39.52:544,40,0	1/1:18,0:15:9.01:149,9,0	1/1:21,0:21:44.54:1375,45,0	1/1:19,1:20:7.64:550,8,0	0/1:8,0:18:20.17:95,0,20	1/1:7,0:18:11.94:90,12,0	0/1:9,0:20:6.99:100,0,7	1/1:12,1:28:11.70:579,12,0	1/1:8,0:7:9.03:135,9,0	0/0:35,0:40:52.34:0,52,1982	0/1:19,0:19:62.72:68,0,63	1/1:26,0:25:30.07:671,30,0	1/1:12,10:24:9.03:546,9,0	1/1:26,0:22:15.51:238,16,0	0/0:16,0:16:35.99:0,36,599	0/0:18,0:21:39.57:0,40,1138	0/0:32,0:37:62.90:0,63,1818	1/1:27,0:27:12.50:369,12,0	1/1:22,0:22:43.36:758,43,0	1/1:17,14:32:14.52:642,15,0	1/1:1,0:5:6.02:245,6,0
chr10	79074066	.	T	TGTGTGC	1621.71	PASS	AB=0.975;AC=18;AF=0.321;AN=56;BaseQRankSum=5.519;DP=615;FS=12.326;HRun=0;HaplotypeScore=157.9115;InbreedingCoeff=-0.4729;MQ=59.89;MQ0=7;MQRankSum=-6.496;QD=4.73;ReadPosRankSum=-2.654;VQSLOD=1.1526;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:47,0:46:99:116,0,168	0/1:9,0:8:46.29:46,0,84	0/0:23,0:15:41.99:0,42,410	0/0:30,0:19:40.02:0,40,510	0/1:17,0:16:48.96:49,0,93	0/0:28,0:28:83.44:0,83,1236	0/0:34,0:34:84.32:0,84,1350	0/1:24,0:24:85.81:86,0,252	0/0:14,0:11:9.85:0,10,73	0/0:27,0:27:3.40:0,3,348	0/1:12,0:12:41.83:52,0,42	0/1:23,0:23:99:173,0,204	0/1:17,0:17:99:280,0,141	0/1:17,0:17:99:173,0,139	0/1:12,0:12:57.10:119,0,57	0/1:13,0:13:2.97:3,0,127	0/0:39,0:40:96.72:0,97,1632	0/1:4,15:26:56.34:208,0,56	0/1:18,0:17:44.18:44,0,147	0/1:14,0:14:96.54:97,0,125	0/1:30,0:28:84.32:84,0,137	0/0:20,0:20:53.94:0,54,672	0/0:19,0:19:51:0,51,899	0/0:37,0:37:96.09:0,96,1557	0/1:27,0:27:10.01:10,0,84	0/1:19,0:19:94.64:95,0,124	0/1:13,0:13:37.48:37,0,168	0/1:5,0:5:37.82:107,0,38
chr10	79075779	.	GAA	G	1469.49	PASS	AB=0.609;AC=13;AF=0.232;AN=56;BaseQRankSum=8.342;DP=621;FS=1.322;HRun=16;HaplotypeScore=97.2978;InbreedingCoeff=0.7418;MQ=72.85;MQ0=5;MQRankSum=-2.852;QD=10.57;ReadPosRankSum=5.054;VQSLOD=2.6686;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:24:43.16:185,43,0	0/0:9,0:9:18.06:0,18,235	0/0:45,0:18:23.71:0,24,199	0/0:25,0:14:3.22:0,3,100	0/0:26,0:30:86.69:0,87,1026	0/0:18,0:22:56.98:0,57,665	0/0:14,1:17:18.72:0,19,415	0/0:31,0:34:83.16:0,83,967	1/1:7,0:19:32.89:141,33,0	0/0:21,0:28:65.42:0,65,700	0/0:14,0:18:42.05:0,42,475	0/1:7,5:13:5.54:115,0,6	1/1:0,8:8:23.97:201,24,0	1/1:3,8:12:20.90:214,21,0	0/0:15,1:19:13.46:0,13,354	0/0:19,1:22:28.39:0,28,555	0/0:17,0:21:58.29:0,58,601	0/0:7,1:18:8.40:0,8,157	0/0:28,0:33:77.49:0,77,875	0/0:15,1:24:28.82:0,29,471	0/0:22,0:27:57.51:0,58,585	0/0:10,0:12:24.61:0,25,245	0/0:19,1:27:25.62:0,26,471	0/0:24,1:27:42.23:0,42,703	1/1:4,0:20:44.26:203,44,0	0/1:7,16:25:0.07:340,0,0	0/0:19,0:20:54.12:0,54,643	0/1:4,13:18:10.53:253,0,11
chr10	79075798	.	C	CCA	2083.82	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=8.425;DP=665;FS=1.011;HRun=0;HaplotypeScore=105.8238;InbreedingCoeff=0.8419;MQ=70.15;MQ0=6;MQRankSum=-9.136;QD=22.90;ReadPosRankSum=2.308;VQSLOD=4.4066;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:69.23:1027,69,0	0/0:10,0:10:24.05:0,24,341	0/0:53,0:22:39.33:0,39,395	0/1:25,0:11:13.55:14,0,109	0/0:38,0:38:99:0,111,1558	0/0:24,0:24:64.72:0,65,800	0/0:17,0:17:51.06:0,51,734	0/0:45,0:44:99:0,101,1517	1/1:2,14:16:38.71:506,39,0	0/0:30,0:30:86.28:0,86,1249	0/0:19,0:19:39.71:0,40,656	0/0:14,0:14:39.05:0,39,555	0/0:16,0:16:45.12:0,45,633	0/0:16,0:16:44.68:0,45,612	0/0:17,0:17:50.67:0,51,663	0/0:21,0:21:63.16:0,63,922	0/0:24,0:24:71.53:0,72,852	0/0:20,0:20:48.01:0,48,633	0/0:29,0:29:46.84:0,47,991	0/0:27,0:27:80.98:0,81,1102	0/0:23,0:23:59.84:0,60,828	0/0:12,0:11:27.09:0,27,414	0/0:22,0:22:55.18:0,55,773	0/0:25,0:25:72.18:0,72,1048	1/1:4,15:19:55.75:686,56,0	0/0:33,0:33:95.51:0,96,1242	0/0:20,0:19:53.96:0,54,782	0/0:18,0:18:50.86:0,51,645
chr10	79078099	.	CT	C	1531.96	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.414;DP=621;FS=0.000;HRun=9;HaplotypeScore=69.9455;InbreedingCoeff=0.9974;MQ=73.87;MQ0=3;MQRankSum=-0.915;QD=20.70;ReadPosRankSum=1.884;VQSLOD=4.2095;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,40:42:99:988,108,0	0/0:10,0:10:24.07:0,24,277	0/0:30,0:22:42.79:0,43,445	0/0:35,0:27:50.38:0,50,531	0/0:21,1:24:41.59:0,42,691	0/0:14,0:14:42.12:0,42,485	0/0:19,0:19:54.16:0,54,623	0/0:32,0:32:90.25:0,90,1022	1/1:0,14:14:39.02:357,39,0	0/0:22,0:22:57.16:0,57,650	0/0:21,1:22:32.93:0,33,631	0/0:15,1:16:20.66:0,21,482	0/0:13,0:13:36.09:0,36,405	0/0:18,0:18:42.11:0,42,475	0/0:33,0:33:93.27:0,93,1065	0/0:19,0:18:42.11:0,42,474	0/0:23,1:24:41.74:0,42,734	0/0:18,0:18:45.13:0,45,519	0/0:23,0:23:69.20:0,69,795	0/0:26,0:26:69.18:0,69,779	0/0:19,0:19:54.11:0,54,592	0/0:22,0:22:60.18:0,60,691	0/0:14,0:14:36.11:0,36,415	0/0:20,0:20:56.90:0,57,635	1/1:3,15:18:36.01:329,36,0	0/0:23,0:23:57.15:0,57,641	0/0:29,0:29:81.21:0,81,915	0/0:18,0:18:54.16:0,54,623
chr10	79079013	.	GA	G	473.60	PASS	AB=0.867;AC=12;AF=0.240;AN=50;BaseQRankSum=5.069;DP=416;FS=6.183;HRun=1;HaplotypeScore=67.3644;InbreedingCoeff=0.0247;MQ=34.19;MQ0=49;MQRankSum=-3.579;QD=3.12;ReadPosRankSum=-0.405;VQSLOD=-0.4647;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:20:4.26:0,4,65	0/0:2,1:2:1.63:0,2,35	./.	./.	0/1:8,2:9:0:0,0,0	0/0:25,0:21:41.80:0,42,530	0/0:13,0:9:8.62:0,9,86	0/1:13,1:10:12.90:13,0,273	0/0:16,0:13:6.69:0,7,74	0/1:27,6:28:99:150,0,600	0/0:16,4:19:5.59:0,6,55	1/1:9,4:12:12.29:134,12,0	0/1:6,3:8:85.24:106,0,85	1/1:3,3:6:3.01:42,3,0	0/0:16,4:18:7.10:0,7,64	0/0:15,2:15:18.47:0,18,229	0/0:11,0:7:11.63:0,12,124	0/1:10,1:10:25.59:26,0,114	0/1:17,2:15:62.48:62,0,419	0/0:17,2:16:18.91:0,19,230	0/0:20,3:15:5.70:0,6,58	0/0:19,0:18:27.09:0,27,382	0/0:23,0:21:29.31:0,29,366	0/0:11,0:10:15:0,15,185	0/0:8,0:8:4.71:0,5,75	0/1:21,3:17:30.77:31,0,392	0/1:11,2:9:48.81:49,0,148	./.
chr10	79079027	.	GGA	G	142.82	PASS	AB=0.945;AC=6;AF=0.125;AN=48;BaseQRankSum=3.027;DP=449;FS=24.720;HRun=0;HaplotypeScore=63.7064;InbreedingCoeff=0.1890;MQ=31.14;MQ0=65;MQRankSum=1.555;QD=2.07;ReadPosRankSum=-2.013;VQSLOD=-0.2463;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:11:4.26:0,4,41	0/0:3,0:1:3.01:0,3,34	./.	0/0:21,0:1:2.99:0,3,24	./.	0/0:30,0:26:45.12:0,45,671	0/0:15,0:11:17.62:0,18,188	0/0:17,0:11:24.02:0,24,278	0/1:17,0:12:5.82:20,0,6	0/0:32,0:26:57.04:0,57,731	./.	0/0:11,1:11:7.32:0,7,98	0/1:10,2:11:45.64:126,0,46	1/1:5,1:6:5.98:75,6,0	0/0:21,0:19:8.94:0,9,73	0/0:15,0:13:13.54:0,14,129	0/0:14,0:8:11.83:0,12,141	0/1:11,1:9:30.58:31,0,33	0/0:19,0:12:21.04:0,21,238	0/0:18,0:15:6.02:0,6,81	0/1:22,0:13:0.01:0,0,0	0/0:17,0:16:18.06:0,18,273	0/0:24,0:20:17.09:0,17,218	0/0:10,0:8:10.38:0,10,184	0/0:7,0:5:2.99:0,3,23	0/0:26,0:15:22.45:0,22,226	0/0:12,0:9:5.91:0,6,49	./.
chr10	79079050	.	AG	A	2508.56	PASS	AB=0.709;AC=26;AF=0.481;AN=54;BaseQRankSum=7.557;DP=548;FS=13.180;HRun=2;HaplotypeScore=55.1653;InbreedingCoeff=-0.0071;MQ=36.20;MQ0=60;MQRankSum=-1.657;QD=8.96;ReadPosRankSum=-1.472;VQSLOD=-0.4995;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:7,7:9:27.97:90,0,28	1/1:1,3:2:3.01:38,3,0	0/0:61,0:3:9.03:0,9,114	0/0:73,1:7:10.74:0,11,131	./.	0/0:30,0:27:65.03:0,65,903	0/0:24,0:23:63.19:0,63,901	0/1:8,4:8:48.59:73,0,49	1/1:6,7:8:11.56:117,12,0	0/1:13,11:21:99:354,0,145	1/1:4,7:9:3.01:38,3,0	0/1:7,11:17:43.75:277,0,44	0/1:5,10:14:37.27:366,0,37	1/1:2,11:12:14.31:193,14,0	1/1:5,10:13:26.98:282,27,0	1/1:5,9:11:16.53:193,17,0	0/1:15,0:11:10.11:10,0,281	0/1:6,11:15:43.97:243,0,44	0/1:8,6:7:26.75:134,0,27	0/1:10,6:13:33.62:34,0,68	0/1:13,10:15:20.45:29,0,20	0/0:23,0:22:45.14:0,45,614	0/0:22,0:19:31.90:0,32,402	0/0:16,0:15:38.96:0,39,543	0/1:7,4:8:31.02:45,0,31	0/1:14,9:11:99:144,0,169	1/1:6,2:5:2.99:24,3,0	0/0:5,1:1:3.01:0,3,45
chr10	79079066	.	GAGAA	G	1564.01	PASS	AB=0.854;AC=20;AF=0.357;AN=56;BaseQRankSum=2.786;DP=545;FS=2.923;HRun=0;HaplotypeScore=85.6606;InbreedingCoeff=0.6787;MQ=50.92;MQ0=31;MQRankSum=-1.365;QD=11.67;ReadPosRankSum=-4.208;VQSLOD=1.7627;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:7:14.17:0,14,109	0/1:4,0:5:18.59:19,0,21	0/0:70,0:9:1.66:0,2,301	0/0:85,0:12:6.75:0,7,294	1/1:8,4:11:3.18:89,3,0	0/0:25,0:24:60.09:0,60,1218	0/0:25,0:24:69.17:0,69,1694	1/1:14,2:14:4.72:233,5,0	0/0:18,0:15:33.01:0,33,415	1/1:13,3:14:5.02:281,5,0	1/1:9,2:9:16.39:111,16,0	0/0:19,0:18:30.09:0,30,557	0/0:17,0:16:43.58:0,44,483	0/0:16,0:15:26.07:0,26,379	1/1:14,4:18:34.62:370,35,0	1/1:11,2:10:13.83:193,14,0	0/0:12,0:10:25.80:0,26,504	0/0:17,0:16:16.12:0,16,304	0/1:12,2:10:24.96:199,0,25	1/1:7,2:9:15.88:137,16,0	1/1:13,2:14:8.60:65,9,0	0/0:21,0:21:48.14:0,48,1193	0/0:19,0:19:39.07:0,39,769	0/0:20,0:20:50.94:0,51,966	0/0:15,0:12:17.98:0,18,187	0/0:18,0:11:33.01:0,33,369	1/1:4,1:4:8.67:60,9,0	0/0:3,0:1:2.96:0,3,19
chr10	79079154	.	AGAAG	A	5341.81	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=5.272;DP=588;FS=11.124;HRun=0;HaplotypeScore=103.8296;InbreedingCoeff=0.9673;MQ=53.87;MQ0=11;MQRankSum=3.667;QD=22.26;ReadPosRankSum=2.271;VQSLOD=4.1854;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:38.84:0,39,1517	1/1:1,7:7:9.03:148,9,0	0/0:13,0:4:12.04:0,12,206	0/0:11,0:9:15.05:0,15,263	1/1:5,16:21:39.02:579,39,0	0/0:28,0:28:63.12:0,63,1361	0/0:30,0:30:69.22:0,69,1416	1/1:30,0:24:39.13:576,39,0	0/0:18,0:19:13.69:0,14,156	1/1:13,16:30:51.14:758,51,0	1/1:2,11:13:30.10:481,30,0	0/0:22,0:21:30.40:0,30,401	0/0:11,0:11:9.02:0,9,106	0/0:22,0:22:24.05:0,24,312	1/1:9,24:33:36.12:591,36,0	1/1:5,17:22:27.09:444,27,0	0/0:16,0:16:42.14:0,42,979	0/0:17,0:17:23.24:0,23,243	1/1:14,3:14:15.05:244,15,0	1/1:4,13:17:36.12:518,36,0	1/1:7,27:32:38.87:639,39,0	0/0:22,0:22:57.20:0,57,1260	0/0:27,0:27:63.20:0,63,1284	0/0:26,0:25:45.12:0,45,959	0/0:17,0:17:14.74:0,15,156	0/0:21,0:21:48.16:0,48,1121	1/1:5,10:15:20.41:364,20,0	0/0:16,0:15:45.15:0,45,840
chr10	79079166	.	G	GGAAGGAAA	4200.59	PASS	AB=0.983;AC=9;AF=0.161;AN=56;BaseQRankSum=-2.323;DP=579;FS=3.970;HRun=0;HaplotypeScore=150.2655;InbreedingCoeff=0.5653;MQ=56.32;MQ0=11;MQRankSum=-7.485;QD=40.39;ReadPosRankSum=2.394;VQSLOD=3.3569;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:86.99:0,87,1785	0/0:8,0:7:9.03:0,9,166	0/0:14,0:8:18.05:0,18,352	0/0:10,0:8:11.22:0,11,306	0/0:20,0:20:53.83:0,54,701	0/0:28,0:28:81.04:0,81,1677	0/0:29,0:29:81.21:0,81,1659	0/0:29,0:24:43.67:0,44,338	0/1:14,0:13:25.94:354,0,26	0/0:30,0:30:56.06:0,56,787	0/0:15,0:15:32.33:0,32,511	1/1:19,4:22:59.94:1358,60,0	1/1:0,11:12:9.03:388,9,0	1/1:1,20:23:27.09:1051,27,0	0/0:29,0:29:42.09:0,42,698	0/0:22,0:22:33.06:0,33,568	0/0:16,0:16:48.14:0,48,1134	0/1:18,1:19:51.35:853,0,51	0/0:18,0:15:32.89:0,33,398	0/0:16,0:16:35.77:0,36,460	0/0:28,0:28:38.77:0,39,643	0/0:22,0:22:60.18:0,60,1379	0/0:28,0:28:81.08:0,81,1582	0/0:25,0:24:60.02:0,60,1178	0/1:13,0:13:66.39:197,0,66	0/0:24,0:24:63.04:0,63,1421	0/0:16,0:16:35.92:0,36,523	0/0:17,0:16:48.13:0,48,1045
chr10	79079501	.	G	GC	2151.36	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.739;DP=656;FS=0.000;HRun=6;HaplotypeScore=65.6644;InbreedingCoeff=0.9927;MQ=84.95;MQ0=0;MQRankSum=-2.742;QD=30.73;ReadPosRankSum=1.036;VQSLOD=4.1470;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,37:41:99:1321,105,0	0/0:5,0:5:15.03:0,15,153	0/0:25,0:25:57.96:0,58,562	0/0:26,0:26:56.75:0,57,628	0/0:19,0:19:48.11:0,48,490	0/0:25,0:25:66.13:0,66,665	0/0:28,0:28:75.09:0,75,740	0/0:31,0:31:60.11:0,60,607	1/1:0,15:15:39.12:483,39,0	0/0:28,0:28:66.14:0,66,670	0/0:12,0:12:30.06:0,30,300	0/0:23,0:23:69.16:0,69,703	0/0:20,0:20:54.12:0,54,550	0/0:15,0:15:45.10:0,45,459	0/0:25,0:25:69.14:0,69,697	0/0:17,0:17:51.11:0,51,519	0/0:42,0:42:99:0,114,1156	0/0:28,0:28:78.13:0,78,784	0/0:16,0:16:45.10:0,45,455	0/0:21,0:21:54.11:0,54,543	0/0:31,0:31:75.15:0,75,757	0/0:22,0:22:57.12:0,57,581	0/0:17,0:17:51.12:0,51,520	0/0:36,0:36:99:0,99,1010	1/1:1,13:14:39.12:491,39,0	0/0:37,0:37:99:0,105,1060	0/0:29,0:29:87.20:0,87,887	0/0:8,0:8:21.03:0,21,214
chr10	79081454	.	GA	G	807.66	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.284;DP=702;FS=2.054;HRun=9;HaplotypeScore=74.1448;InbreedingCoeff=0.9978;MQ=80.94;MQ0=0;MQRankSum=0.745;QD=21.25;ReadPosRankSum=2.298;VQSLOD=4.5171;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,1:37:74.68:0,75,1067	0/0:11,0:11:32.98:0,33,337	0/0:24,1:26:59.18:0,59,675	0/0:24,0:25:35.98:0,36,398	0/0:21,1:22:30.36:0,30,589	0/0:30,0:30:81.22:0,81,919	0/0:20,0:20:48.14:0,48,556	0/0:34,0:34:87.19:0,87,941	0/0:28,0:28:78.21:0,78,881	0/0:25,0:25:66.20:0,66,764	0/0:18,0:18:51.10:0,51,567	0/0:31,0:31:93.27:0,93,1068	0/0:22,0:22:54.16:0,54,624	0/0:22,0:22:63.14:0,63,705	0/0:29,0:29:81.20:0,81,906	0/0:31,0:31:81.23:0,81,929	0/0:28,0:28:81.21:0,81,917	0/0:30,0:30:84.24:0,84,962	0/0:15,0:15:22.88:0,23,449	0/0:31,0:31:90.13:0,90,987	0/0:22,0:22:63.14:0,63,706	0/0:23,0:23:60.12:0,60,671	0/0:20,0:20:51.09:0,51,565	0/0:16,0:16:45.11:0,45,502	0/0:23,1:24:38.60:0,39,655	1/1:1,24:25:72.03:655,72,0	0/0:44,0:44:99:0,108,1209	1/1:0,13:13:30.02:274,30,0
chr10	79082735	.	A	AG	947.45	PASS	AB=0.929;AC=17;AF=0.386;AN=44;BaseQRankSum=-0.713;DP=195;FS=6.928;HRun=2;HaplotypeScore=24.2054;InbreedingCoeff=0.6928;MQ=37.85;MQ0=7;MQRankSum=-3.006;QD=19.74;ReadPosRankSum=-1.910;VQSLOD=2.4959;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:20:36.11:0,36,446	1/1:1,1:2:6.02:82,6,0	./.	./.	./.	0/0:12,0:9:24.08:0,24,297	0/0:15,0:8:15.05:0,15,186	1/1:4,3:6:17.97:212,18,0	0/0:6,0:6:9.03:0,9,111	1/1:0,1:1:3.01:43,3,0	./.	./.	0/0:7,0:2:6.02:0,6,74	0/0:8,0:5:9.03:0,9,111	1/1:1,2:2:6.02:86,6,0	1/1:1,1:2:5.98:63,6,0	0/0:16,0:14:27.05:0,27,307	0/0:16,0:16:21.06:0,21,260	1/1:2,5:7:15.05:216,15,0	./.	1/1:1,10:9:21.07:302,21,0	0/0:9,0:6:15.05:0,15,186	0/0:6,0:2:6.02:0,6,74	0/0:20,0:18:33.10:0,33,409	0/0:4,0:3:9.03:0,9,111	0/1:12,1:7:22.14:22,0,202	1/1:0,2:2:6.02:86,6,0	0/0:2,0:2:6.02:0,6,74
chr10	79082772	.	AG	A	761.58	PASS	AC=14;AF=0.333;AN=42;BaseQRankSum=5.492;DP=161;FS=10.648;HRun=4;HaplotypeScore=20.6064;InbreedingCoeff=0.6385;MQ=38.11;MQ0=7;MQRankSum=-4.796;QD=22.40;ReadPosRankSum=-2.678;VQSLOD=1.0199;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:11:9.03:0,9,126	1/1:0,1:1:3.01:34,3,0	./.	./.	./.	0/0:8,0:4:8.94:0,9,100	0/0:11,0:6:15.05:0,15,208	1/1:1,18:18:54.08:577,54,0	0/0:3,0:3:9.03:0,9,126	./.	1/1:0,2:2:6.02:68,6,0	0/0:5,0:4:9.03:0,9,126	0/0:5,0:1:3.01:0,3,42	0/0:7,0:4:12.04:0,12,168	./.	1/1:1,1:2:3.01:34,3,0	0/0:13,0:11:24.01:0,24,311	0/0:12,0:12:18.06:0,18,251	1/1:2,4:4:9.03:101,9,0	./.	1/1:1,2:2:6:57,6,0	0/0:4,0:1:3.01:0,3,42	0/0:6,0:3:2.92:0,3,17	0/0:21,0:19:21.07:0,21,294	./.	0/0:13,1:7:18.06:0,18,252	1/1:0,1:1:3.01:34,3,0	0/0:1,0:1:3.01:0,3,42
chr10	79083291	.	A	AC	2920.13	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-11.448;DP=685;FS=2.070;HRun=3;HaplotypeScore=75.4241;InbreedingCoeff=0.9999;MQ=87.38;MQ0=0;MQRankSum=-1.568;QD=33.18;ReadPosRankSum=2.512;VQSLOD=4.2938;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,36:40:99:1385,99,0	0/0:11,0:11:33.10:0,33,393	0/0:32,0:31:81.15:0,81,900	0/0:26,0:26:52.09:0,52,609	0/0:21,0:21:63.19:0,63,754	0/0:21,0:21:57.16:0,57,671	0/0:26,0:26:72.22:0,72,863	0/0:24,0:24:72.21:0,72,852	1/1:0,23:23:60.20:838,60,0	0/0:27,0:27:72.22:0,72,859	0/0:17,0:17:51.14:0,51,596	0/0:20,0:20:60.17:0,60,708	0/0:21,0:21:63.19:0,63,756	0/0:25,0:25:72.22:0,72,863	0/0:30,0:30:90.25:0,90,1056	0/0:28,0:28:81.24:0,81,960	0/0:34,0:33:87.27:0,87,1043	0/0:21,0:21:63.17:0,63,741	0/0:25,0:25:72.21:0,72,854	0/0:25,0:25:68.90:0,69,780	0/0:38,0:38:99:0,108,1273	0/0:17,0:17:48.15:0,48,575	0/0:21,0:21:54.15:0,54,634	0/0:32,0:32:90.28:0,90,1078	1/1:2,23:25:60.20:840,60,0	0/0:19,0:19:57.17:0,57,674	0/0:15,0:15:45.14:0,45,539	0/0:21,0:21:63.19:0,63,755
chr10	79085685	.	AT	A	9262.22	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=10.366;DP=569;FS=1.227;HRun=10;HaplotypeScore=60.1928;InbreedingCoeff=0.9604;MQ=76.72;MQ0=0;MQRankSum=-2.047;QD=21.95;ReadPosRankSum=2.738;VQSLOD=5.8207;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:59.97:521,60,0	1/1:1,15:16:44.95:384,45,0	0/0:17,0:17:39.01:0,39,384	0/0:11,0:11:1.24:0,1,176	1/1:2,24:27:65:553,65,0	0/0:18,0:18:48.12:0,48,523	0/0:16,1:17:19.05:0,19,429	1/1:7,18:25:53.96:465,54,0	1/1:1,19:20:53.99:469,54,0	1/1:6,20:26:56.96:491,57,0	1/1:1,26:27:68.98:599,69,0	1/1:0,16:16:47.99:417,48,0	1/1:0,15:15:44.99:391,45,0	1/1:1,18:19:47.99:417,48,0	1/1:4,20:24:32.69:445,33,0	1/1:0,22:22:65.99:573,66,0	0/0:19,1:19:27.98:0,28,494	1/1:1,15:16:41.99:365,42,0	1/1:3,16:19:47.97:413,48,0	1/1:2,20:22:59.99:521,60,0	1/1:2,14:16:41.99:365,42,0	0/0:23,0:24:65.98:0,66,688	0/0:27,0:27:73.98:0,74,774	0/0:12,0:12:36.10:0,36,398	1/1:3,17:20:47.98:417,48,0	1/1:4,20:24:59.96:521,60,0	1/1:1,27:28:74.97:651,75,0	1/1:4,12:16:32.99:286,33,0
chr10	79085940	.	GGCGATTTGATC	G	7964.21	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.566;DP=694;FS=14.071;HRun=0;HaplotypeScore=263.6829;InbreedingCoeff=0.9833;MQ=85.59;MQ0=0;MQRankSum=-13.610;QD=75.85;ReadPosRankSum=3.238;VQSLOD=2.9399;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,166,7665	0/0:3,0:3:9.03:0,9,508	0/0:19,0:19:39.11:0,39,1327	0/0:28,0:28:54.19:0,54,2627	0/0:18,0:18:51.15:0,51,2507	0/0:25,0:25:69.24:0,69,3844	0/0:32,0:32:93.30:0,93,4512	0/0:34,0:34:90.30:0,90,4458	0/0:23,0:23:66.22:0,66,3037	0/0:19,0:19:54.19:0,54,2676	0/0:12,0:12:36.12:0,36,2033	1/1:5,27:32:81.28:2792,81,0	1/1:5,17:22:45.15:1552,45,0	1/1:2,29:32:81.28:2793,81,0	0/0:28,0:28:75.24:0,75,4027	0/0:25,0:25:75.26:0,75,4178	0/0:32,0:32:84.29:0,84,4585	1/1:5,14:19:24.08:828,24,0	0/0:18,0:18:51.13:0,51,2376	0/0:29,0:29:87.30:0,87,4705	0/0:42,0:42:99:0,120,5838	0/0:21,0:21:60.18:0,60,2742	0/0:22,0:22:60.21:0,60,3037	0/0:25,0:25:75.21:0,75,3757	0/0:15,0:15:45.15:0,45,2168	0/0:23,0:23:63.22:0,63,2724	0/0:27,0:25:78.27:0,78,3803	0/0:14,0:14:42.14:0,42,2040
chr10	79086377	.	T	TTA	7391.60	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=11.408;DP=587;FS=25.276;HRun=0;HaplotypeScore=156.6430;InbreedingCoeff=0.9728;MQ=68.21;MQ0=1;MQRankSum=-9.870;QD=27.48;ReadPosRankSum=-4.400;VQSLOD=3.2099;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:48.14:0,48,621	1/1:7,0:7:6:69,6,0	0/0:15,0:14:20.65:0,21,246	0/0:13,0:12:15.02:0,15,183	1/1:25,2:27:30.09:414,30,0	0/0:19,0:19:48.14:0,48,623	0/0:16,0:16:45.13:0,45,584	1/1:36,5:41:99:1356,111,0	0/0:18,0:18:54.18:0,54,718	1/1:27,3:31:90.26:1185,90,0	1/1:23,1:24:48.05:539,48,0	0/0:15,0:15:45.11:0,45,567	0/0:18,0:18:48.13:0,48,607	0/0:15,0:15:42.14:0,42,559	1/1:25,1:26:60.17:765,60,0	1/1:19,2:21:60.16:717,60,0	0/0:11,0:11:33.09:0,33,423	0/0:16,0:16:42.07:0,42,522	1/1:17,5:21:53.83:713,54,0	1/1:37,1:38:65.39:780,65,0	1/1:6,2:8:9.03:123,9,0	0/0:16,0:16:48.16:0,48,639	0/0:31,0:31:90.28:0,90,1180	0/0:7,0:7:21.05:0,21,264	0/0:36,0:35:99:0,99,1288	0/0:27,0:27:29.45:0,29,899	1/1:20,4:23:60.15:731,60,0	0/0:24,0:24:69.17:0,69,869
chr10	79086389	.	GCA	G	7645.03	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.643;DP=595;FS=28.228;HRun=0;HaplotypeScore=170.5240;InbreedingCoeff=0.9620;MQ=59.81;MQ0=2;MQRankSum=-11.631;QD=28.42;ReadPosRankSum=0.529;VQSLOD=3.8475;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.18:0,60,1044	1/1:0,4:7:3.01:48,3,0	0/0:11,0:9:20.10:0,20,317	0/0:17,0:11:14.15:0,14,212	1/1:2,20:30:24.78:345,25,0	0/0:23,0:23:66.23:0,66,1339	0/0:16,0:16:48.15:0,48,901	1/1:5,24:43:99:1304,107,0	0/0:21,0:21:63.16:0,63,1103	1/1:4,23:29:80.32:1194,80,0	1/1:1,22:26:45.15:716,45,0	0/0:14,0:14:42.13:0,42,750	0/0:17,0:17:51.14:0,51,879	0/0:17,0:17:51.16:0,51,932	1/1:1,22:26:58.05:876,58,0	1/1:2,16:20:54.15:808,54,0	0/0:13,0:13:39.13:0,39,769	0/0:15,0:15:45.14:0,45,823	1/1:5,12:18:47.92:592,48,0	1/1:5,30:40:58.90:845,59,0	1/1:2,4:6:8.99:136,9,0	0/0:17,0:17:51.16:0,51,999	0/0:31,0:31:93.32:0,93,1843	0/0:7,0:7:21.07:0,21,411	0/0:33,0:33:99:0,99,1679	0/0:28,1:29:39.47:0,39,1460	1/1:6,15:22:55.29:782,55,0	0/0:24,0:24:72.21:0,72,1258
chr10	79086400	.	TGC	T	2678.52	PASS	AB=0.963;AC=14;AF=0.250;AN=56;BaseQRankSum=14.754;DP=576;FS=9.782;HRun=0;HaplotypeScore=184.3066;InbreedingCoeff=0.1754;MQ=57.85;MQ0=1;MQRankSum=-13.036;QD=10.34;ReadPosRankSum=5.320;VQSLOD=2.1482;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.19:0,57,1108	0/1:9,0:9:34.88:35,0,55	0/0:10,0:8:12.02:0,12,195	0/0:18,0:11:9.77:0,10,81	0/1:25,2:27:18.14:173,0,18	0/0:21,0:21:63.22:0,63,1264	0/0:12,0:12:36.04:0,36,505	0/1:41,4:45:99:336,0,242	0/0:19,0:19:57.20:0,57,1131	0/1:27,0:27:56.31:365,0,56	1/1:25,0:25:30.60:414,31,0	0/0:13,0:13:39.13:0,39,744	0/0:17,0:17:51.17:0,51,1009	0/0:19,0:19:54.18:0,54,1031	0/1:25,1:26:7.60:350,0,8	0/1:19,1:20:28.31:326,0,28	0/0:14,0:14:42.14:0,42,832	0/0:18,0:18:54.18:0,54,1049	0/1:14,1:14:81.60:84,0,82	1/1:38,0:38:2.44:385,2,0	1/1:4,0:4:5.94:49,6,0	0/0:16,0:16:48.16:0,48,908	0/0:31,0:31:90.28:0,90,1608	0/0:8,0:8:24.08:0,24,451	0/0:31,0:31:93.32:0,93,1809	0/0:26,0:26:76.81:0,77,1462	0/1:23,0:23:25.28:326,0,25	0/0:24,0:24:72.25:0,72,1403
chr10	79086411	.	G	GTA	7779.92	PASS	AB=0.580;AC=19;AF=0.339;AN=56;BaseQRankSum=11.248;DP=584;FS=2.697;HRun=0;HaplotypeScore=168.8086;InbreedingCoeff=0.6724;MQ=59.74;MQ0=1;MQRankSum=-7.700;QD=28.29;ReadPosRankSum=-1.484;VQSLOD=5.6276;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:63.20:0,63,791	0/1:2,8:10:25.81:136,0,26	0/0:10,0:8:5.24:0,5,21	0/0:19,0:13:7.34:0,7,53	1/1:10,16:26:33.11:527,33,0	0/0:22,0:22:60.19:0,60,756	0/0:11,0:11:30.10:0,30,377	1/1:32,17:49:58.50:1396,58,0	0/0:19,0:19:42.12:0,42,517	0/1:8,20:28:9.50:915,0,10	1/1:16,15:31:63.21:1010,63,0	0/0:13,0:13:30.08:0,30,365	0/0:15,0:15:42.13:0,42,530	0/0:15,0:15:36.12:0,36,454	1/1:11,14:26:51.17:833,51,0	0/1:7,14:21:18.54:736,0,19	0/0:17,0:17:48.11:0,48,575	0/0:21,0:21:51.16:0,51,641	1/1:8,7:14:0.42:370,0,0	1/1:11,29:40:66.18:1064,66,0	1/1:2,1:3:3.01:50,3,0	0/0:13,0:13:33.11:0,33,416	0/0:25,0:25:62.58:0,63,737	0/0:9,0:9:27.07:0,27,326	0/0:32,0:32:72.23:0,72,908	0/0:22,0:22:51.16:0,51,644	1/1:3,23:26:45.15:743,45,0	0/0:20,0:20:45.14:0,45,568
chr10	79088207	.	T	TGGG	2828.91	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-0.473;DP=485;FS=8.540;HRun=8;HaplotypeScore=92.5932;InbreedingCoeff=0.9565;MQ=75.44;MQ0=0;MQRankSum=-2.596;QD=15.72;ReadPosRankSum=-3.756;VQSLOD=-0.2825;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.22:0,81,1041	1/1:2,5:7:11.55:236,12,0	0/0:11,0:11:9.02:0,9,191	0/0:17,0:16:33.18:0,33,344	1/1:10,12:23:23.96:321,24,0	0/0:14,0:14:42.14:0,42,551	0/0:14,0:14:33.09:0,33,434	1/1:18,7:29:23.98:301,24,0	0/0:20,0:20:57.17:0,57,733	1/1:7,1:9:8.75:56,9,0	1/1:4,3:9:9.03:182,9,0	0/0:9,0:9:21.05:0,21,276	0/0:14,0:14:36.10:0,36,473	0/0:14,0:14:30.06:0,30,394	1/1:10,4:16:9.03:155,9,0	1/1:7,7:18:18.04:307,18,0	0/0:19,0:19:48.15:0,48,630	0/0:30,0:30:78.20:0,78,1001	1/1:8,6:15:21.04:347,21,0	1/1:10,7:18:17.98:267,18,0	1/1:6,0:17:26.91:211,27,0	0/0:16,0:16:45.12:0,45,562	0/0:15,0:15:36.11:0,36,472	0/0:11,0:11:27.07:0,27,355	0/0:28,0:28:81.26:0,81,1062	0/0:4,0:25:58.77:0,59,356	1/1:13,6:19:40.63:666,41,0	0/0:0,0:16:44.11:0,44,269
chr10	79088417	.	AC	A	6302.31	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=10.339;DP=603;FS=3.837;HRun=8;HaplotypeScore=67.2807;InbreedingCoeff=0.9776;MQ=60.75;MQ0=1;MQRankSum=0.844;QD=22.67;ReadPosRankSum=0.335;VQSLOD=5.3257;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:34:56.74:0,57,328	1/1:0,7:7:15.02:145,15,0	0/0:20,0:14:6.57:0,7,249	0/0:15,0:13:26.82:0,27,307	1/1:5,30:35:87.13:838,87,0	0/0:28,0:28:81.20:0,81,933	0/0:19,0:19:45.11:0,45,518	1/1:10,22:32:66.09:637,66,0	0/0:14,0:14:10.19:0,10,393	1/1:2,16:18:45.05:428,45,0	1/1:5,19:24:54.03:512,54,0	0/0:17,0:17:51.16:0,51,615	0/0:22,0:22:66.18:0,66,782	0/0:15,0:15:45.13:0,45,532	1/1:2,22:24:57.09:550,57,0	1/1:1,22:23:23.86:514,24,0	0/0:31,0:31:84.11:0,84,977	1/1:1,22:23:57.09:550,57,0	1/1:8,11:15:27.01:253,27,0	1/1:2,15:17:41.98:393,42,0	1/1:5,23:28:75.09:714,75,0	0/0:15,0:15:45.12:0,45,524	0/0:14,0:13:33.09:0,33,387	0/0:28,0:28:72.22:0,72,869	0/0:16,0:16:45.13:0,45,532	0/0:23,0:23:48.14:0,48,571	1/1:0,28:28:81:768,81,0	0/0:14,0:14:33.06:0,33,373
chr10	79089806	.	G	GAC	10216.89	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=4.828;DP=525;FS=0.000;HRun=0;HaplotypeScore=100.0089;InbreedingCoeff=0.9943;MQ=74.96;MQ0=0;MQRankSum=-6.886;QD=47.97;ReadPosRankSum=-0.737;VQSLOD=5.1125;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:39:99:1912,99,0	1/1:5,3:8:21.07:403,21,0	0/0:8,0:8:21.07:0,21,312	0/0:16,0:16:26.09:0,26,328	1/1:10,0:10:18.06:320,18,0	0/0:19,0:19:57.17:0,57,848	0/0:30,0:30:87.28:0,87,1311	1/1:1,12:13:36.12:687,36,0	1/1:1,10:11:30.10:580,30,0	1/1:8,7:15:45.15:836,45,0	1/1:6,6:12:24.04:457,24,0	0/0:19,0:19:54.18:0,54,824	0/0:18,0:18:51.17:0,51,781	0/0:25,0:25:66.21:0,66,988	1/1:14,7:21:51.17:967,51,0	1/1:10,5:15:42.14:799,42,0	0/0:39,0:39:99:0,111,1645	0/0:36,0:36:99:0,102,1513	1/1:5,9:15:45.15:842,45,0	1/1:6,0:6:18.06:316,18,0	1/1:5,16:21:33.11:632,33,0	0/0:14,0:14:39.13:0,39,593	0/0:7,0:7:18.06:0,18,274	0/0:44,0:44:99:0,132,2019	1/1:0,16:16:45.15:868,45,0	0/0:30,0:30:29.73:0,30,1222	1/1:10,0:11:33.11:599,33,0	0/0:7,0:7:21.07:0,21,321
chr10	79089807	.	AGCGGCCG	A	4473.07	PASS	AB=0.711;AC=14;AF=0.250;AN=56;BaseQRankSum=12.699;DP=509;FS=2.059;HRun=0;HaplotypeScore=168.1194;InbreedingCoeff=0.2316;MQ=73.75;MQ0=0;MQRankSum=-11.535;QD=32.89;ReadPosRankSum=0.064;VQSLOD=4.2452;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,2945	0/1:3,5:8:34.13:255,0,34	0/0:8,0:8:21.07:0,21,746	0/0:14,0:14:33.07:0,33,851	1/1:0,9:9:18.06:380,18,0	0/0:19,0:19:57.17:0,57,2210	0/0:29,0:29:87.30:0,87,3637	0/1:11,0:11:31.31:31,0,265	0/0:11,0:11:33.11:0,33,1002	0/1:7,8:15:99:560,0,107	0/1:4,5:9:99:243,0,116	0/0:18,0:18:54.19:0,54,2179	0/0:18,0:18:54.19:0,54,2217	0/0:24,0:24:69.22:0,69,2570	0/1:6,13:19:56.63:834,0,57	0/1:5,9:14:92.49:539,0,92	0/0:39,0:39:99:0,111,4376	0/0:36,0:36:99:0,105,4229	0/1:10,4:14:99:231,0,276	1/1:1,5:6:18.06:383,18,0	0/1:15,5:20:99:264,0,200	0/0:14,0:14:39.13:0,39,1513	0/0:7,0:7:21.07:0,21,817	0/0:44,0:44:99:0,132,5353	0/0:17,0:17:24.74:0,25,1124	0/0:29,1:30:18.15:0,18,3193	1/1:1,10:11:33.11:754,33,0	0/0:7,0:7:21.07:0,21,858
chr10	79089816	.	AG	A	719.65	PASS	AB=0.695;AC=14;AF=0.250;AN=56;BaseQRankSum=13.014;DP=507;FS=2.223;HRun=2;HaplotypeScore=117.6754;InbreedingCoeff=0.2336;MQ=71.90;MQ0=0;MQRankSum=-12.145;QD=6.00;ReadPosRankSum=2.602;VQSLOD=1.0155;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1714	0/1:3,4:7:23.88:62,0,24	0/0:8,0:8:21.05:0,21,271	0/0:11,0:11:23.32:0,23,241	1/1:0,9:9:12.93:69,13,0	0/0:20,0:20:60.19:0,60,879	0/0:33,0:33:99:0,99,1443	0/1:8,0:8:5.21:5,0,226	0/0:12,0:12:36.12:0,36,540	0/1:5,8:13:98.04:98,0,170	0/1:3,5:8:37.01:37,0,93	0/0:19,0:19:57.19:0,57,853	0/0:19,0:19:57.19:0,57,853	0/0:23,0:23:69.23:0,69,1028	0/1:5,13:18:85.47:182,0,85	0/1:4,9:13:98.89:99,0,128	0/0:40,0:40:99:0,114,1683	0/0:35,0:35:99:0,105,1566	0/1:9,4:13:35.29:35,0,243	1/1:0,5:5:11.11:79,11,0	0/1:10,5:15:50.02:50,0,130	0/0:12,0:12:33.11:0,33,494	0/0:12,0:12:33.11:0,33,492	0/0:45,0:45:99:0,135,2023	0/0:20,0:20:51.12:0,51,721	0/0:30,1:31:66.48:0,66,1237	1/1:1,10:11:31.32:172,31,0	0/0:7,0:7:15.05:0,15,225
chr10	79089822	.	CA	C	2131.33	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=11.738;DP=478;FS=1.427;HRun=1;HaplotypeScore=104.5719;InbreedingCoeff=0.9766;MQ=76.38;MQ0=0;MQRankSum=-11.235;QD=21.31;ReadPosRankSum=-0.806;VQSLOD=3.5126;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1704	1/1:0,5:5:12:107,12,0	0/0:9,0:9:27.07:0,27,409	0/0:13,0:13:39.06:0,39,565	1/1:1,9:10:20.87:182,21,0	0/0:20,0:20:60.20:0,60,959	0/0:33,0:33:99:0,99,1578	1/1:3,3:6:18.05:232,18,0	0/0:12,0:12:36.12:0,36,576	1/1:2,8:10:8.52:198,9,0	1/1:1,5:6:14.72:138,15,0	0/0:20,0:20:60.19:0,60,934	0/0:19,0:19:57.19:0,57,911	0/0:22,0:22:66.23:0,66,1055	1/1:1,13:14:22.21:322,22,0	1/1:3,9:12:32.88:308,33,0	0/0:38,0:38:99:0,111,1769	0/0:34,0:34:99:0,102,1631	1/1:4,4:8:20.96:202,21,0	1/1:4,5:9:21.02:209,21,0	1/1:2,6:8:17.98:170,18,0	0/0:12,0:12:33.11:0,33,527	0/0:11,0:11:33.11:0,33,528	0/0:44,0:44:99:0,132,2082	0/0:19,0:19:45.15:0,45,719	0/0:28,1:29:60.28:0,60,1248	1/1:2,10:12:32.97:286,33,0	0/0:5,0:5:15.05:0,15,240
chr10	79091569	.	A	AG	122	PASS	AB=0.666;AC=4;AF=0.071;AN=56;BaseQRankSum=-2.535;DP=549;FS=3.399;HRun=10;HaplotypeScore=106.1961;InbreedingCoeff=0.2988;MQ=79.20;MQ0=7;MQRankSum=0.399;QD=3.39;ReadPosRankSum=-1.496;VQSLOD=0.4253;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:32:59.83:0,60,474	0/0:10,0:10:9.57:0,10,28	0/0:65,0:35:54.54:0,55,392	0/0:57,1:29:22.31:0,22,205	0/0:17,0:16:14.24:0,14,41	0/0:22,1:23:12.19:0,12,276	0/0:12,0:12:32.94:0,33,266	0/0:21,0:21:28.50:0,29,82	0/1:8,6:15:12.57:83,0,13	0/0:19,0:19:21.24:0,21,61	0/0:11,0:11:16.29:0,16,47	0/0:11,0:11:26.52:0,27,202	0/0:18,0:18:47.84:0,48,378	0/0:20,1:21:16.24:0,16,335	0/0:23,0:23:30.54:0,31,88	0/0:17,0:17:26.26:0,26,76	0/0:21,0:21:59.64:0,60,472	0/1:6,7:13:34.23:80,0,34	0/0:15,0:13:5.78:0,6,38	0/0:20,0:20:15.98:0,16,46	0/0:12,0:12:18.33:0,18,53	0/0:13,0:13:38.91:0,39,310	0/0:16,0:16:35.60:0,36,277	0/0:13,0:13:4.32:0,4,236	1/1:2,6:8:6.02:64,6,0	0/0:22,0:21:32.58:0,33,95	0/0:19,0:19:19.88:0,20,57	0/0:4,0:4:8.15:0,8,24
chr10	79091577	.	GGGAAGGGGC	G	1822.03	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.385;DP=534;FS=0.000;HRun=0;HaplotypeScore=162.4468;InbreedingCoeff=0.9195;MQ=84.50;MQ0=6;MQRankSum=-5.292;QD=65.07;ReadPosRankSum=2.693;VQSLOD=3.6141;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.20:0,96,3794	0/0:11,0:11:15.03:0,15,388	0/0:63,0:34:92.47:0,92,2155	0/0:60,0:31:54.28:0,54,1489	0/0:14,0:13:30.06:0,30,708	0/0:20,0:20:57.18:0,57,2513	0/0:15,0:15:42.14:0,42,1830	0/0:17,0:17:51.10:0,51,1179	0/0:11,0:11:21.07:0,21,841	0/0:15,0:15:45.10:0,45,1034	0/0:10,0:10:24.08:0,24,631	0/0:11,0:11:33.11:0,33,1521	0/0:18,0:18:51.17:0,51,2145	0/0:21,0:21:63.22:0,63,2741	0/0:22,0:22:45.15:0,45,1185	0/0:19,0:19:39.13:0,39,1021	0/0:22,0:22:66.23:0,66,3072	0/0:12,0:12:21.05:0,21,783	0/0:14,0:13:36.08:0,36,823	0/0:19,0:19:36.59:0,37,927	0/0:11,0:11:30.10:0,30,749	0/0:15,0:15:45.15:0,45,2092	0/0:15,0:15:45.15:0,45,2082	0/0:15,0:15:45.15:0,45,1972	0/0:6,0:6:6.02:0,6,256	1/1:0,21:20:57.09:1572,57,0	0/0:16,0:16:32.81:0,33,874	1/1:0,7:7:12.04:366,12,0
chr10	79091578	.	GGA	G	5180.39	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=6.047;DP=530;FS=8.507;HRun=0;HaplotypeScore=90.3655;InbreedingCoeff=0.9755;MQ=85.42;MQ0=6;MQRankSum=-2.392;QD=26.84;ReadPosRankSum=4.556;VQSLOD=5.4291;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:92.96:0,93,1371	1/1:0,11:11:15.02:211,15,0	0/0:61,0:34:79.93:0,80,1039	0/0:61,0:32:47.38:0,47,640	1/1:1,13:13:26.94:335,27,0	0/0:19,0:19:54.10:0,54,861	0/0:15,0:15:42.10:0,42,684	1/1:0,16:16:48.10:634,48,0	0/0:11,0:11:21.06:0,21,288	1/1:1,15:16:21.03:503,21,0	1/1:0,10:10:24.08:341,24,0	0/0:11,0:11:33.05:0,33,517	0/0:18,0:18:51.16:0,51,857	0/0:23,0:23:69.15:0,69,1058	1/1:0,22:22:45.15:640,45,0	1/1:1,18:19:39.13:557,39,0	0/0:22,0:22:66.18:0,66,1141	0/0:10,0:10:18.05:0,18,248	1/1:5,7:12:32.89:424,33,0	1/1:11,8:19:38.52:440,39,0	1/1:0,11:11:30.08:409,30,0	0/0:16,0:16:45.13:0,45,772	0/0:15,0:15:45.10:0,45,776	0/0:15,0:15:45.10:0,45,716	0/0:6,0:6:6.02:0,6,74	1/1:21,0:20:47.71:224,48,0	1/1:1,14:15:32.40:410,32,0	1/1:7,0:7:11.19:52,11,0
chr10	79091579	.	GA	G	2130.04	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=9.938;DP=523;FS=7.726;HRun=2;HaplotypeScore=90.9862;InbreedingCoeff=0.9722;MQ=85.96;MQ0=6;MQRankSum=-0.064;QD=11.04;ReadPosRankSum=4.309;VQSLOD=1.6785;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:85.06:0,85,972	1/1:11,0:11:14.42:82,14,0	0/0:57,1:32:66.62:0,67,604	0/0:57,0:31:49.29:0,49,408	1/1:13,1:13:26.42:160,26,0	0/0:19,0:19:52.66:0,53,623	0/0:15,0:15:42.09:0,42,504	1/1:16,0:16:46.27:276,46,0	0/0:11,0:11:20.98:0,21,198	1/1:16,0:16:20.19:228,20,0	1/1:10,0:10:23.52:146,24,0	0/0:11,0:11:32.12:0,32,384	0/0:18,0:18:47.99:0,48,558	0/0:22,0:22:66.09:0,66,762	1/1:22,0:22:43.80:250,44,0	1/1:18,0:19:38.02:218,38,0	0/0:21,0:21:63.17:0,63,821	0/0:11,0:11:20.98:0,21,199	1/1:10,2:12:31.61:190,32,0	1/1:16,2:19:38.49:271,38,0	1/1:11,0:11:29.31:175,29,0	0/0:16,0:16:45.11:0,45,563	0/0:15,0:15:45.08:0,45,567	0/0:16,0:16:48.04:0,48,532	0/0:6,0:6:5.98:0,6,46	1/1:21,0:20:38.47:129,38,0	1/1:14,1:15:32.22:205,32,0	1/1:7,0:7:8.88:28,9,0
chr10	79092453	.	G	GTCTGTC	3545.74	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=-1.274;DP=675;FS=11.615;HRun=0;HaplotypeScore=203.0026;InbreedingCoeff=0.2986;MQ=51.74;MQ0=13;MQRankSum=-5.400;QD=11.55;ReadPosRankSum=-2.482;VQSLOD=1.5397;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:20.36:0,20,204	0/1:8,0:8:2.44:2,0,65	0/0:21,0:10:5.81:0,6,61	0/0:33,0:13:0.87:0,1,21	0/1:15,0:15:35.95:60,0,36	0/0:22,0:22:51.16:0,51,888	0/0:36,0:36:70.05:0,70,1149	0/1:39,0:37:53.02:476,0,53	1/1:26,0:26:39.13:653,39,0	0/1:20,0:20:62.30:76,0,62	0/0:11,0:11:8.44:0,8,63	1/1:8,21:29:15.05:463,15,0	1/1:7,16:23:23.10:681,23,0	1/1:14,5:19:24.07:472,24,0	0/0:22,0:22:28.60:0,29,154	0/0:23,0:23:30.28:0,30,160	0/0:43,0:43:99:0,108,2035	1/1:11,17:29:3.01:100,3,0	0/1:14,0:14:28.41:207,0,28	0/1:19,0:18:21.77:22,0,91	0/1:38,0:38:66.95:67,0,172	0/0:15,0:15:30.10:0,30,501	0/0:20,0:19:36.11:0,36,599	0/0:39,0:39:99:0,99,1858	1/1:18,0:18:15.05:249,15,0	0/0:35,0:33:3.40:0,3,233	0/0:14,0:14:17.92:0,18,161	0/1:7,0:7:12.91:19,0,13
chr10	79092462	.	T	TGTCTC	2143.75	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=-3.289;DP=661;FS=19.114;HRun=0;HaplotypeScore=197.8363;InbreedingCoeff=0.4019;MQ=50.66;MQ0=15;MQRankSum=-3.034;QD=15.53;ReadPosRankSum=5.835;VQSLOD=1.8410;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:51.64:0,52,876	0/0:10,0:10:21.06:0,21,365	0/0:20,0:12:21.01:0,21,309	0/0:36,0:14:29.05:0,29,397	0/0:14,0:14:20.53:0,21,359	0/0:18,0:18:51.18:0,51,1049	0/0:32,0:32:81.57:0,82,1576	0/0:44,0:42:99:0,108,1236	1/1:1,26:27:39.13:1197,39,0	0/0:24,0:24:58.55:0,59,942	0/0:9,0:9:13.87:0,14,230	0/1:27,0:27:99:193,0,199	0/1:21,0:21:99:298,0,105	0/1:18,0:18:87.13:104,0,87	0/0:20,0:20:32.36:0,32,590	0/0:22,0:22:37.88:0,38,671	0/0:46,0:46:99:0,126,2519	0/1:23,0:23:39.85:40,0,78	0/0:20,0:19:53.87:0,54,642	0/0:15,0:14:24.62:0,25,413	0/0:33,0:33:46.16:0,46,833	0/0:18,0:18:45.15:0,45,851	0/0:19,0:18:42.14:0,42,834	0/0:41,0:41:99:0,114,2251	1/1:5,16:19:15.03:458,15,0	0/0:30,0:28:75.19:0,75,1201	0/0:15,0:15:34:0,34,636	0/0:5,0:5:15.03:0,15,226
chr10	79092512	.	C	CGT	1673.72	PASS	AB=0.973;AC=28;AF=0.500;AN=56;BaseQRankSum=7.099;DP=585;FS=3.304;HRun=0;HaplotypeScore=189.6743;InbreedingCoeff=0.5043;MQ=48.03;MQ0=5;MQRankSum=-7.895;QD=5.67;ReadPosRankSum=-2.422;VQSLOD=2.9838;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,3:41:10.97:210,11,0	1/1:7,0:7:6.63:24,7,0	0/0:29,0:20:51.07:0,51,612	0/0:30,0:21:25.15:0,25,487	1/1:18,0:18:4.03:68,4,0	0/0:22,0:22:63.18:0,63,804	0/0:31,0:31:71.93:0,72,897	1/1:23,0:23:56.94:455,57,0	0/1:16,0:16:2.12:2,0,177	1/1:15,0:15:13.58:192,14,0	1/1:5,0:5:0.68:2,1,0	0/0:26,0:26:3.11:0,3,226	0/0:14,0:14:13.50:0,13,248	0/0:18,0:18:27.22:0,27,384	1/1:15,0:15:2.09:28,2,0	1/1:16,0:16:4.44:57,4,0	0/0:43,0:43:99:0,120,1498	0/1:25,1:26:72.64:73,0,275	1/1:9,0:9:6.36:41,6,0	0/1:13,0:13:4.67:44,0,5	0/1:17,1:18:0:0,0,0	0/0:20,0:20:51.10:0,51,638	0/0:16,0:16:45.13:0,45,582	0/0:39,0:39:99:0,105,1340	0/1:24,2:23:17.17:17,0,237	1/1:28,3:31:36.50:486,36,0	0/1:11,0:11:15.64:38,0,16	1/1:2,2:5:8.99:121,9,0
chr10	79092518	.	TGCGGGC	T	5865.18	PASS	AB=0.793;AC=24;AF=0.429;AN=56;BaseQRankSum=8.467;DP=624;FS=18.305;HRun=0;HaplotypeScore=217.4586;InbreedingCoeff=0.3594;MQ=47.39;MQ0=6;MQRankSum=-8.094;QD=19.29;ReadPosRankSum=-1.150;VQSLOD=2.7497;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,1:40:66.57:67,0,102	0/1:2,6:9:61.06:266,0,61	0/0:28,0:17:51.11:0,51,1243	0/0:28,0:17:25.19:0,25,1149	1/1:8,10:20:22.27:443,22,0	0/0:23,0:23:65.24:0,65,2117	0/0:30,1:31:35.62:0,36,2549	1/1:11,8:23:28.96:924,29,0	0/0:17,0:17:5.48:0,5,301	1/1:7,11:20:50.15:850,50,0	1/1:1,4:5:5.51:81,6,0	0/0:25,0:27:36:0,36,520	0/1:15,0:16:10.24:10,0,456	0/0:19,0:20:5.07:0,5,588	1/1:9,11:22:14.34:655,14,0	1/1:3,14:17:31.87:646,32,0	0/0:44,0:44:99:0,130,3907	0/0:24,0:26:3.13:0,3,636	0/1:9,6:15:71.32:407,0,71	1/1:4,10:14:21.64:473,22,0	0/1:18,5:25:9.47:14,0,9	0/0:20,0:20:57.18:0,57,1921	0/0:17,0:17:51.16:0,51,1603	0/0:39,0:39:99:0,114,3693	0/1:24,0:21:18.01:18,0,495	0/1:25,0:34:99:395,0,304	1/1:3,9:12:29.71:566,30,0	0/1:6,0:7:47.79:48,0,57
chr10	79092534	.	CGT	C	1246.95	PASS	AB=0.843;AC=18;AF=0.321;AN=56;BaseQRankSum=7.162;DP=669;FS=2.447;HRun=0;HaplotypeScore=191.5812;InbreedingCoeff=-0.3192;MQ=47.22;MQ0=14;MQRankSum=-7.588;QD=3.90;ReadPosRankSum=2.300;VQSLOD=2.3619;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:17.37:0,17,169	0/1:5,4:10:57.97:58,0,67	0/0:32,0:9:2.56:0,3,73	0/0:45,0:18:6.83:0,7,63	0/1:15,9:24:64.51:102,0,65	0/1:24,2:26:19.78:20,0,582	0/0:32,0:32:26.03:0,26,815	0/1:24,0:23:28.21:28,0,169	0/1:10,0:10:2.60:3,0,21	0/1:16,5:21:65.92:215,0,66	0/1:4,3:7:23.24:25,0,23	0/0:20,0:22:1.11:0,1,99	0/1:12,0:14:24.38:24,0,105	1/1:8,0:22:10.66:66,11,0	0/1:17,7:24:99:187,0,139	0/1:13,6:20:28.38:192,0,28	0/0:36,2:39:2.23:0,2,896	0/0:28,0:28:22.36:0,22,232	0/1:19,2:21:12.75:67,0,13	0/1:6,7:14:6.31:179,0,6	0/1:24,2:26:8.92:9,0,63	0/1:24,0:24:2.43:2,0,804	0/1:17,0:17:22.60:23,0,373	0/0:46,0:46:87.21:0,87,1276	0/0:23,0:21:10.48:0,10,74	0/0:32,0:32:48.53:0,49,583	0/1:8,7:15:44.95:201,0,45	0/0:8,0:8:11.36:0,11,97
chr10	79092536	.	T	TGTGC	4000.85	PASS	AB=0.908;AC=27;AF=0.482;AN=56;BaseQRankSum=0.700;DP=701;FS=16.570;HRun=0;HaplotypeScore=212.3064;InbreedingCoeff=0.0392;MQ=49.38;MQ0=16;MQRankSum=-4.168;QD=9.22;ReadPosRankSum=0.457;VQSLOD=1.6294;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:40:60.07:60,0,112	0/1:7,2:10:33.57:217,0,34	0/0:33,0:7:8.55:0,9,137	0/0:47,0:19:21.04:0,21,235	1/1:15,10:26:0.58:285,1,0	0/0:25,0:25:59.78:0,60,862	0/0:33,0:33:49.44:0,49,1178	0/1:15,12:31:94.53:567,0,95	0/1:9,0:9:41.71:44,0,42	1/1:14,11:29:6.05:707,6,0	1/1:5,4:9:5.52:99,6,0	0/1:21,0:21:8.19:8,0,179	0/1:14,0:14:43.53:44,0,110	0/1:23,0:23:18.11:18,0,70	1/1:17,8:24:45.91:711,46,0	0/1:15,5:20:18.58:146,0,19	0/0:40,0:40:99:0,108,1496	0/1:28,0:28:5.39:5,0,117	1/1:8,13:23:17.34:365,17,0	1/1:13,3:16:16.94:158,17,0	0/1:9,18:31:24.83:150,0,25	0/0:24,0:24:50.34:0,50,1029	0/0:17,0:17:34.53:0,35,563	0/0:47,0:47:99:0,114,1708	0/1:21,0:20:55.29:55,0,83	0/1:31,0:31:3.42:3,0,503	1/1:9,7:17:26.06:336,26,0	0/1:8,0:8:20.91:21,0,32
chr10	79092739	.	CCA	C	245.86	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=2.258;DP=314;FS=3.434;HRun=0;HaplotypeScore=48.0547;InbreedingCoeff=0.4557;MQ=77.96;MQ0=0;MQRankSum=-2.532;QD=7.23;ReadPosRankSum=-1.862;VQSLOD=2.1920;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:11.85:0,12,95	1/1:1,0:1:1.55:4,2,0	0/0:19,0:19:44.97:0,45,573	0/0:15,0:13:30.09:0,30,399	0/0:9,0:9:8.64:0,9,75	0/0:19,0:19:54.09:0,54,790	0/0:34,0:34:99:0,99,1518	0/0:11,0:11:20.91:0,21,199	1/1:3,7:10:21.05:281,21,0	1/1:4,0:4:5.68:24,6,0	0/0:5,0:5:3:0,3,25	0/0:6,0:6:11.64:0,12,75	0/0:6,0:6:8.38:0,8,79	0/0:2,0:2:3:0,3,26	0/1:7,0:7:11.51:12,0,44	0/0:9,0:9:24.03:0,24,258	0/0:28,0:27:83.86:0,84,1312	0/0:17,0:17:22.30:0,22,253	0/0:6,0:6:17.95:0,18,147	0/0:4,0:4:8.92:0,9,64	0/0:13,0:13:17.91:0,18,176	0/0:12,0:12:30.07:0,30,449	0/0:17,0:17:48.12:0,48,713	0/0:19,0:19:56.99:0,57,896	0/1:12,0:12:45.74:52,0,46	0/0:6,0:6:11.99:0,12,133	0/0:9,0:9:15.42:0,15,172	0/0:4,0:4:9.01:0,9,82
chr10	79093341	.	G	GA	13408.87	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=1.646;DP=596;FS=1.089;HRun=5;HaplotypeScore=72.0335;InbreedingCoeff=0.9976;MQ=84.06;MQ0=0;MQRankSum=-3.607;QD=32.62;ReadPosRankSum=1.954;VQSLOD=5.5069;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,32:37:81.26:1052,81,0	1/1:2,12:14:36.12:468,36,0	0/0:18,0:18:45.92:0,46,448	0/0:18,0:18:38.97:0,39,366	1/1:2,27:29:81.07:974,81,0	0/0:18,0:18:48.06:0,48,488	0/0:7,0:7:18.04:0,18,187	1/1:3,28:31:84.20:997,84,0	0/0:14,0:14:36.07:0,36,378	1/1:5,28:33:87.28:1125,87,0	1/1:3,20:23:57.18:738,57,0	1/1:4,21:25:57.19:740,57,0	1/1:3,17:20:51.17:658,51,0	1/1:0,20:20:60.20:780,60,0	1/1:2,13:15:39.13:507,39,0	1/1:1,16:17:18.99:592,19,0	0/0:27,0:27:78.15:0,78,813	1/1:0,12:12:30.10:388,30,0	1/1:2,20:22:60.13:721,60,0	1/1:6,25:31:75.19:954,75,0	1/1:1,14:15:36.12:468,36,0	0/0:27,0:27:72.16:0,72,764	0/0:21,0:21:63.16:0,63,676	0/0:14,0:14:33.06:0,33,345	0/0:21,0:21:63.13:0,63,654	1/1:2,21:24:69.12:845,69,0	1/1:4,26:29:72.23:935,72,0	1/1:0,13:13:36.12:467,36,0
chr10	79096512	.	G	GT	929.45	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.499;DP=627;FS=21.512;HRun=7;HaplotypeScore=61.2729;InbreedingCoeff=0.9992;MQ=86.48;MQ0=0;MQRankSum=-1.412;QD=27.34;ReadPosRankSum=2.333;VQSLOD=2.0726;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:87.07:0,87,822	0/0:11,0:11:33.05:0,33,318	0/0:24,0:24:57.07:0,57,543	0/0:20,0:20:51.01:0,51,472	0/0:44,0:44:99:0,117,1123	0/0:26,0:26:66.10:0,66,637	0/0:19,0:19:51.06:0,51,486	0/0:26,0:25:63.09:0,63,608	1/1:2,15:17:45.14:544,45,0	0/0:21,0:21:63.10:0,63,608	0/0:25,0:25:63.10:0,63,608	0/0:13,0:13:36.06:0,36,348	0/0:22,0:22:60.10:0,60,579	0/0:19,0:19:48.08:0,48,464	0/0:25,0:25:60.07:0,60,572	0/0:15,0:15:42.95:0,43,408	0/0:22,0:22:60.10:0,60,579	0/0:20,0:20:54.09:0,54,521	0/0:23,0:23:60.09:0,60,579	0/0:31,0:31:90.13:0,90,864	0/0:12,0:12:27.04:0,27,261	0/0:37,0:37:99:0,102,979	0/0:22,0:22:51.07:0,51,492	0/0:16,0:16:42.02:0,42,396	1/1:1,16:17:42.13:507,42,0	0/0:23,0:22:66.10:0,66,633	0/0:26,0:26:72.08:0,72,683	0/0:17,0:17:51.08:0,51,492
chr10	79096629	.	A	ATGTG	4788.45	PASS	AB=0.740;AC=48;AF=0.960;AN=50;BaseQRankSum=-1.074;DP=574;FS=0.000;HRun=0;HaplotypeScore=113.1817;InbreedingCoeff=-0.0082;MQ=68.26;MQ0=12;MQRankSum=0.400;QD=9.43;ReadPosRankSum=0.400;VQSLOD=4.0871;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:9.03:191,9,0	1/1:1,3:5:9.02:211,9,0	./.	./.	1/1:18,8:29:17.80:347,18,0	1/1:12,0:26:8.50:93,8,0	1/1:12,1:16:8.77:152,9,0	1/1:25,0:24:11.32:172,11,0	1/1:4,0:6:2.63:51,3,0	1/1:16,0:15:18:241,18,0	1/1:20,0:20:4.97:86,5,0	1/1:14,0:14:2.56:70,3,0	0/1:15,0:22:6.44:6,0,41	1/1:11,9:21:21.07:493,21,0	1/1:17,7:24:12.04:282,12,0	1/1:11,5:15:9.03:212,9,0	1/1:17,1:19:17.77:235,18,0	./.	1/1:11,2:14:9.03:175,9,0	0/1:16,9:25:3.22:306,0,3	1/1:26,9:38:6.02:141,6,0	1/1:16,9:29:11.34:165,11,0	1/1:16,9:25:5.07:96,5,0	1/1:14,10:27:14.52:236,15,0	1/1:21,0:21:18.04:311,18,0	1/1:12,0:11:9.03:140,9,0	1/1:16,2:23:14.76:233,15,0	1/1:5,0:8:9.03:144,9,0
chr10	79099285	.	TGTTCA	T	3718.17	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.104;DP=638;FS=2.362;HRun=0;HaplotypeScore=114.6839;InbreedingCoeff=0.9998;MQ=85.91;MQ0=0;MQRankSum=-4.389;QD=57.20;ReadPosRankSum=3.704;VQSLOD=3.9628;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:66.23:1392,66,0	0/0:15,0:15:45.15:0,45,1326	0/0:20,0:20:57.20:0,57,1611	0/0:22,0:22:63.21:0,63,1803	0/0:24,0:24:66.23:0,66,2023	0/0:32,0:32:96.29:0,96,2854	0/0:22,0:22:63.21:0,63,1802	0/0:28,0:28:84.27:0,84,2382	0/0:22,0:22:63.22:0,63,1968	0/0:23,0:23:69.24:0,69,2155	0/0:28,0:28:81.23:0,81,2428	0/0:23,0:23:69.24:0,69,2186	0/0:18,0:18:45.15:0,45,1393	0/0:22,0:22:63.22:0,63,1962	0/0:31,0:31:93.32:0,93,2890	0/0:15,0:15:42.14:0,42,1266	0/0:15,0:15:45.15:0,45,1356	0/0:26,0:26:78.27:0,78,2357	0/0:25,0:25:75.25:0,75,2271	0/0:31,0:31:90.30:0,90,2721	0/0:24,0:24:66.22:0,66,1955	0/0:21,0:21:63.22:0,63,1955	0/0:20,0:20:57.20:0,57,1782	0/0:31,0:30:90.31:0,90,2841	0/0:10,0:10:30.10:0,30,951	1/1:0,22:22:66.23:1414,66,0	0/0:25,0:25:75.24:0,75,2305	1/1:0,14:14:42.14:912,42,0
chr10	79100606	.	T	TAAAA	1328.90	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.167;DP=374;FS=41.758;HRun=7;HaplotypeScore=62.4771;InbreedingCoeff=0.9058;MQ=63.86;MQ0=3;MQRankSum=-3.364;QD=41.53;ReadPosRankSum=0.360;VQSLOD=-0.3699;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,6:9:18.06:451,18,0	0/0:9,0:9:21.07:0,21,328	0/0:6,0:6:18.06:0,18,282	0/0:6,0:6:10.99:0,11,141	0/0:25,0:25:66.16:0,66,983	0/0:12,0:12:27.08:0,27,422	0/0:15,0:15:36.04:0,36,559	0/0:22,0:19:57.15:0,57,844	0/0:11,0:11:24.06:0,24,350	0/0:13,0:12:30.09:0,30,449	0/0:12,0:12:30.09:0,30,468	0/0:13,0:13:27.09:0,27,414	0/0:7,0:7:15.05:0,15,235	0/0:3,0:3:3.01:0,3,47	0/0:16,0:16:39.12:0,39,602	0/0:9,0:9:21.05:0,21,306	0/0:23,0:23:66.18:0,66,982	0/0:20,0:20:41.86:0,42,622	0/0:11,0:9:24.08:0,24,369	0/0:13,0:13:39.13:0,39,606	0/0:7,0:7:21.07:0,21,328	0/0:14,0:14:39.13:0,39,603	0/0:21,0:21:57.19:0,57,888	0/0:18,0:17:51.15:0,51,771	0/0:19,0:19:48.14:0,48,720	1/1:8,9:17:30.06:641,30,0	0/0:17,0:17:42.13:0,42,652	1/1:0,5:5:15.05:376,15,0
chr10	79100663	.	T	TA	1703.64	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=5.155;DP=332;FS=4.361;HRun=8;HaplotypeScore=43.2812;InbreedingCoeff=0.4530;MQ=77.34;MQ0=3;MQRankSum=-1.017;QD=8.11;ReadPosRankSum=2.546;VQSLOD=0.3887;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:0:0,0,0	1/1:4,0:3:2.50:9,2,0	0/0:17,0:11:16.61:0,17,94	0/0:20,0:13:20.82:0,21,158	0/1:12,0:12:11.78:12,0,45	0/0:9,0:9:21:0,21,192	0/0:13,0:13:33.01:0,33,298	0/1:13,0:13:3.88:54,0,4	1/1:0,11:11:21.06:242,21,0	0/1:10,0:10:9.04:9,0,75	0/1:8,0:8:19.88:20,0,30	1/1:1,7:8:12.04:138,12,0	1/1:3,9:12:24.07:275,24,0	1/1:0,5:5:9.03:104,9,0	1/1:9,0:9:4.34:64,4,0	1/1:10,0:9:19.77:77,20,0	0/0:20,0:20:53.95:0,54,472	1/1:3,9:11:12.04:138,12,0	0/1:11,0:11:19.88:20,0,26	0/1:16,0:16:32.36:32,0,44	1/1:8,0:8:18.66:95,19,0	0/0:10,0:10:26.73:0,27,222	0/0:17,0:17:35.84:0,36,301	0/0:15,0:15:19.15:0,19,306	1/1:3,19:21:45.13:519,45,0	0/1:10,0:9:0:0,0,0	1/1:13,0:12:6.51:79,7,0	0/1:5,0:5:0:0,0,0
chr10	79100671	.	A	AG	2249.02	PASS	AB=1.000;AC=33;AF=0.660;AN=50;BaseQRankSum=0.525;DP=322;FS=20.337;HRun=8;HaplotypeScore=40.1384;InbreedingCoeff=0.8027;MQ=73.32;MQ0=18;MQRankSum=-0.703;QD=12.56;ReadPosRankSum=2.433;VQSLOD=1.2274;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,0:2:3.01:34,3,0	0/0:23,0:10:3.45:0,3,23	0/0:24,0:11:14.75:0,15,106	1/1:3,3:6:9.03:103,9,0	0/0:11,0:11:31.41:0,31,254	0/0:13,0:13:35.99:0,36,320	1/1:2,8:10:21.02:226,21,0	1/1:10,0:10:17.64:64,18,0	1/1:5,4:9:12.03:138,12,0	1/1:4,6:10:11.04:136,11,0	1/1:10,0:9:13.14:56,13,0	1/1:10,0:10:11.88:51,12,0	1/1:6,0:6:7.04:23,7,0	1/1:1,7:9:24.07:271,24,0	1/1:2,10:10:24.07:275,24,0	0/0:23,0:23:59.88:0,60,516	0/1:14,0:13:17.75:18,0,23	1/1:4,7:11:21.03:218,21,0	1/1:5,6:12:18.05:206,18,0	1/1:0,9:9:21.06:240,21,0	0/0:10,0:10:21.89:0,22,193	0/0:15,0:15:23.99:0,24,219	0/0:18,0:17:44.94:0,45,391	1/1:21,0:20:36.57:120,37,0	./.	1/1:2,13:14:24.04:261,24,0	./.
chr10	79100761	.	CAAA	C	350.20	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=1.208;DP=409;FS=0.000;HRun=17;HaplotypeScore=78.1779;InbreedingCoeff=0.8677;MQ=46.12;MQ0=9;MQRankSum=3.611;QD=12.08;ReadPosRankSum=2.417;VQSLOD=0.5361;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:9:21.90:0,22,238	0/0:9,0:13:21.07:0,21,282	0/0:5,0:4:12.01:0,12,131	0/0:9,0:6:15.72:0,16,138	0/0:15,0:20:37.69:0,38,394	0/0:14,0:13:29.98:0,30,377	0/0:9,0:9:17.86:0,18,158	0/0:20,0:25:48.09:0,48,596	1/1:4,12:17:29.66:287,30,0	0/0:16,0:15:42.12:0,42,514	0/0:13,0:13:21.04:0,21,244	0/0:16,0:18:42.07:0,42,535	0/0:8,0:8:23.99:0,24,272	0/0:11,0:12:23.92:0,24,283	0/0:9,0:17:33.11:0,33,450	0/0:9,0:11:21.07:0,21,290	0/0:25,0:29:64.27:0,64,849	0/0:20,0:21:42.08:0,42,524	0/0:18,0:18:39.04:0,39,497	0/0:8,0:10:18.06:0,18,234	0/0:3,0:3:3.01:0,3,40	0/0:14,0:16:44.96:0,45,521	0/0:14,0:14:32.95:0,33,411	0/0:26,0:27:47.60:0,48,658	1/1:1,10:11:16.26:182,16,0	0/0:6,0:5:14.98:0,15,166	0/0:20,0:21:47.89:0,48,646	./.
chr10	79102125	.	A	AT	5573.85	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=20.167;DP=596;FS=11.213;HRun=0;HaplotypeScore=163.2589;InbreedingCoeff=0.9808;MQ=79.23;MQ0=0;MQRankSum=-18.416;QD=16.02;ReadPosRankSum=1.605;VQSLOD=6.4259;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.14:0,57,758	1/1:1,5:6:17.28:108,17,0	0/0:25,0:25:72.24:0,72,1006	0/0:17,0:17:51.17:0,51,698	1/1:4,23:27:72.04:374,72,0	0/0:22,0:22:66.21:0,66,904	0/0:17,0:17:45.15:0,45,629	1/1:0,31:31:91.58:600,92,0	1/1:1,17:18:43.08:233,43,0	1/1:5,26:31:80.35:669,80,0	1/1:1,18:19:52.57:244,53,0	1/1:1,26:27:74.36:418,74,0	1/1:4,16:20:49.06:312,49,0	1/1:6,9:15:5.11:203,5,0	1/1:4,26:30:73.97:424,74,0	1/1:2,19:21:57.48:318,57,0	0/0:23,0:23:69.18:0,69,924	0/0:14,0:14:42.10:0,42,565	1/1:2,14:16:44.43:307,44,0	1/1:3,26:29:82.66:449,83,0	1/1:3,7:10:19.92:116,20,0	0/0:21,0:21:63.18:0,63,861	0/0:22,0:22:66.21:0,66,900	0/0:34,0:34:99:0,102,1406	1/1:3,17:20:57.22:363,57,0	0/0:21,0:21:60.20:0,60,839	1/1:2,26:28:68.98:435,69,0	0/0:12,0:12:36.12:0,36,503
chr10	79102128	.	TC	T	3632.37	PASS	AB=0.609;AC=31;AF=0.554;AN=56;BaseQRankSum=20.441;DP=606;FS=9.458;HRun=1;HaplotypeScore=170.9473;InbreedingCoeff=0.9242;MQ=81.02;MQ0=0;MQRankSum=-18.374;QD=10.41;ReadPosRankSum=2.455;VQSLOD=1.2038;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.21:0,66,1029	1/1:1,5:6:15.34:74,15,0	0/0:28,0:28:84.19:0,84,1235	0/0:19,0:19:54.18:0,54,826	1/1:3,24:27:56.79:227,57,0	0/0:22,0:22:66.22:0,66,1048	0/0:18,0:18:54.17:0,54,831	1/1:1,31:32:89.59:442,90,0	1/1:0,17:17:34.05:120,34,0	1/1:4,26:30:63.53:462,64,0	1/1:2,18:20:43.77:162,44,0	1/1:1,26:27:62.92:235,63,0	1/1:5,16:21:48.93:234,49,0	0/1:5,9:14:40.12:85,0,40	1/1:4,26:30:61.94:266,62,0	1/1:2,19:21:49.98:200,50,0	0/0:21,0:21:63.18:0,63,960	0/0:15,0:15:45.13:0,45,691	1/1:0,15:15:40.03:227,40,0	1/1:4,26:30:73.67:323,74,0	1/1:3,7:10:16.94:76,17,0	0/0:22,0:22:66.20:0,66,1009	0/0:23,0:23:68.45:0,68,1057	0/0:34,0:34:99:0,102,1603	1/1:4,17:21:51.94:245,52,0	0/0:21,0:21:63.21:0,63,1005	1/1:2,26:28:52.72:253,53,0	0/0:12,0:12:36.12:0,36,575
chr10	79102865	.	ATT	A	10905.60	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=11.523;DP=632;FS=17.163;HRun=7;HaplotypeScore=125.3841;InbreedingCoeff=0.9911;MQ=73.50;MQ0=2;MQRankSum=-4.336;QD=31.52;ReadPosRankSum=2.714;VQSLOD=3.6135;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:24:51.08:0,51,496	1/1:1,10:11:30.10:382,30,0	0/0:28,0:23:15.78:0,16,575	0/0:18,0:14:10.85:0,11,376	1/1:2,20:22:57.18:726,57,0	0/0:27,0:27:75.25:0,75,1287	0/0:19,0:19:54.18:0,54,945	1/1:3,27:30:78.23:978,78,0	1/1:3,19:22:48.15:611,48,0	1/1:3,22:25:65.94:803,66,0	1/1:3,21:24:60.18:763,60,0	1/1:2,25:27:69.22:873,69,0	1/1:0,19:19:48.15:612,48,0	1/1:1,14:15:42.13:535,42,0	1/1:3,26:29:72.23:917,72,0	1/1:1,23:24:51.16:650,51,0	0/0:30,0:30:87.30:0,87,1522	0/0:22,0:22:60.17:0,60,1017	1/1:3,17:20:51.15:637,51,0	1/1:4,18:22:60.19:764,60,0	1/1:2,10:12:18.05:229,18,0	0/0:22,0:22:66.23:0,66,1155	0/0:30,0:30:84.29:0,84,1466	0/0:16,0:16:48.16:0,48,840	1/1:3,7:10:27.06:317,27,0	0/0:1,0:39:99:0,114,1124	1/1:2,32:34:87.28:1109,87,0	0/0:0,0:11:27.04:0,27,263
chr10	79102966	.	G	GA	11981.76	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=16.563;DP=582;FS=0.000;HRun=6;HaplotypeScore=104.9561;InbreedingCoeff=0.9722;MQ=62.14;MQ0=0;MQRankSum=-0.559;QD=32.74;ReadPosRankSum=-0.275;VQSLOD=3.6859;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.13:0,60,612	1/1:1,11:12:33.11:415,33,0	0/0:6,0:6:5.80:0,6,43	0/0:5,0:6:9.02:0,9,92	1/1:3,31:34:89.75:1131,90,0	0/0:31,0:31:93.21:0,93,948	0/0:21,0:21:60.12:0,60,605	1/1:6,33:39:99:1214,99,0	1/1:2,19:21:57.18:717,57,0	1/1:4,25:29:75.24:936,75,0	1/1:0,15:15:42.13:528,42,0	1/1:0,23:23:66.21:829,66,0	1/1:5,15:20:51.15:626,51,0	1/1:4,14:19:41.43:538,41,0	1/1:3,27:29:84.24:1040,84,0	1/1:1,17:18:54.16:666,54,0	0/0:14,0:14:39.06:0,39,389	0/0:17,0:17:45.10:0,45,459	1/1:3,12:15:36.12:452,36,0	1/1:2,22:24:60.19:755,60,0	1/1:1,6:7:12.04:151,12,0	0/0:26,0:26:63.14:0,63,643	0/0:23,0:23:54.10:0,54,544	0/0:17,0:17:45.10:0,45,459	1/1:3,19:22:54.17:679,54,0	0/0:23,0:23:60.12:0,60,606	1/1:4,34:38:99:1305,105,0	0/0:10,0:10:30.07:0,30,306
chr10	79103192	.	T	TA	10429.06	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=14.802;DP=563;FS=12.762;HRun=6;HaplotypeScore=83.8539;InbreedingCoeff=0.9912;MQ=66.30;MQ0=0;MQRankSum=-1.725;QD=31.13;ReadPosRankSum=-2.563;VQSLOD=3.2571;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.16:0,72,735	1/1:0,5:5:15.05:189,15,0	0/0:10,0:10:21.48:0,21,214	0/0:13,0:13:30.07:0,30,306	1/1:1,25:26:69.09:809,69,0	0/0:18,0:18:45.09:0,45,452	0/0:25,0:25:66.14:0,66,673	1/1:8,24:32:72.22:891,72,0	1/1:2,21:24:60.19:753,60,0	1/1:6,11:17:39.12:487,39,0	1/1:1,16:17:45.14:566,45,0	1/1:4,16:20:51.11:610,51,0	1/1:1,16:17:45.14:566,45,0	1/1:6,12:18:39.08:472,39,0	1/1:1,22:23:66.21:830,66,0	1/1:0,21:21:63.20:792,63,0	0/0:21,0:21:57.13:0,57,582	0/0:17,0:17:45.06:0,45,448	1/1:1,20:21:54.15:662,54,0	1/1:4,23:27:66.14:796,66,0	1/1:5,11:16:11.52:459,12,0	0/0:23,0:23:66.13:0,66,667	0/0:21,0:21:63.13:0,63,636	0/0:24,0:24:60.12:0,60,605	1/1:3,15:18:39.12:491,39,0	0/0:22,0:22:66.15:0,66,673	1/1:4,29:32:84.27:1056,84,0	0/0:6,0:6:18.02:0,18,175
chr10	79103229	.	AGG	A	1921.67	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.375;DP=579;FS=9.359;HRun=2;HaplotypeScore=129.3724;InbreedingCoeff=0.9876;MQ=62.20;MQ0=0;MQRankSum=-4.593;QD=39.22;ReadPosRankSum=1.238;VQSLOD=2.8452;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.13:0,69,1296	0/0:4,0:4:12.04:0,12,233	0/0:13,0:14:27.08:0,27,628	0/0:16,0:14:41.22:0,41,691	0/0:30,0:30:81.26:0,81,1581	0/0:17,0:17:51.18:0,51,1036	0/0:26,0:26:75.26:0,75,1510	0/0:27,0:27:81.23:0,81,1515	0/0:25,0:25:66.23:0,66,1338	0/0:26,0:26:78.26:0,78,1546	0/0:17,0:17:51.17:0,51,1001	1/1:1,17:18:48.15:755,48,0	1/1:2,14:16:39.13:630,39,0	1/1:0,15:15:42.14:679,42,0	0/0:23,0:23:69.17:0,69,1356	0/0:23,0:23:66.23:0,66,1337	0/0:23,0:23:66.18:0,66,1253	0/0:15,0:15:42.08:0,42,751	0/0:20,0:20:54.14:0,54,1018	0/0:25,0:25:75.24:0,75,1462	0/0:11,0:11:27.07:0,27,498	0/0:27,0:27:81.26:0,81,1608	0/0:23,0:23:69.20:0,69,1319	0/0:21,0:21:60.21:0,60,1218	0/0:20,0:20:57.18:0,57,1120	0/0:23,0:23:69.22:0,69,1323	0/0:41,0:41:99:0,111,2245	0/0:8,0:8:24.08:0,24,486
chr10	79103511	.	A	AGT	19426.87	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=15.577;DP=691;FS=1.726;HRun=0;HaplotypeScore=98.2683;InbreedingCoeff=0.9992;MQ=85.83;MQ0=0;MQRankSum=-7.528;QD=45.71;ReadPosRankSum=2.333;VQSLOD=6.0516;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.22:0,87,1182	1/1:0,7:7:21.07:390,21,0	0/0:26,0:26:75.05:0,75,954	0/0:23,0:23:57.14:0,57,785	1/1:1,32:33:81.28:1484,81,0	0/0:30,0:30:84.27:0,84,1215	0/0:25,0:25:75.24:0,75,1083	1/1:1,32:34:99:1633,99,0	1/1:2,29:32:81.27:1455,81,0	1/1:1,35:36:99:1874,108,0	1/1:1,19:20:51.09:906,51,0	1/1:1,21:23:51.17:928,51,0	1/1:1,26:27:69.24:1279,69,0	1/1:1,21:22:51.17:944,51,0	1/1:1,25:28:78.27:1424,78,0	1/1:1,33:35:90.31:1666,90,0	0/0:15,0:15:45.09:0,45,599	0/0:11,0:11:33.11:0,33,484	1/1:1,12:13:36.08:568,36,0	1/1:6,23:31:63.22:1168,63,0	1/1:1,37:39:90.31:1672,90,0	0/0:31,0:31:87.29:0,87,1275	0/0:17,0:17:51.14:0,51,696	0/0:22,0:22:63.21:0,63,925	1/1:1,21:22:48.16:890,48,0	0/0:28,0:28:78.23:0,78,1093	1/1:1,21:23:63.22:1147,63,0	0/0:9,0:9:27.09:0,27,397
chr10	79104252	.	TGGGGGG	T	846.59	PASS	AB=0.754;AC=22;AF=0.440;AN=50;BaseQRankSum=9.176;DP=502;FS=2.221;HRun=8;HaplotypeScore=183.2427;InbreedingCoeff=0.3252;MQ=55.14;MQ0=6;MQRankSum=-7.061;QD=4.81;ReadPosRankSum=-0.634;VQSLOD=-0.1519;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:36:0.91:25,1,0	./.	0/0:54,0:32:79.76:0,80,2293	0/0:37,1:28:68.70:0,69,1737	1/1:15,1:17:0.79:2,1,0	0/0:30,0:30:84.27:0,84,2768	0/0:20,0:20:54.18:0,54,1713	1/1:4,5:9:9.29:287,9,0	1/1:3,0:3:1.25:3,1,0	0/1:11,2:14:7.78:96,0,8	1/1:4,2:6:0.36:1,0,0	./.	0/1:4,1:9:28.13:45,0,28	0/1:7,1:11:0:0,0,0	0/0:13,3:18:1.95:0,2,7	1/1:8,1:10:1.24:3,1,0	0/0:28,0:30:87.28:0,87,2745	0/0:9,0:20:21.86:0,22,1350	0/1:1,1:2:46.47:46,0,63	1/1:6,6:13:0.03:0,0,0	./.	0/0:32,0:33:99:0,99,3032	0/0:25,0:25:69.24:0,69,2359	0/0:38,0:39:99:0,102,3145	0/0:5,1:5:1.20:0,1,4	0/1:21,2:25:30.68:319,0,31	1/1:8,1:10:10.96:49,11,0	0/1:7,2:9:4.12:107,0,4
chr10	79104253	.	G	GT	799.71	PASS	AB=0.891;AC=28;AF=0.538;AN=52;BaseQRankSum=8.388;DP=466;FS=4.354;HRun=1;HaplotypeScore=142.8126;InbreedingCoeff=0.4979;MQ=57.48;MQ0=6;MQRankSum=-4.711;QD=4.68;ReadPosRankSum=-0.385;VQSLOD=0.2070;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,7:31:2.84:13,3,0	./.	0/0:56,0:33:73.23:0,73,949	0/0:37,0:27:61.52:0,62,721	1/1:6,6:12:2.88:24,3,0	0/0:30,0:30:84.21:0,84,1087	0/0:18,0:18:50.96:0,51,603	1/1:7,1:8:2.60:59,3,0	1/1:2,0:2:3:25,3,0	1/1:5,3:8:15.42:132,15,0	0/1:2,1:3:0.04:0,0,0	./.	1/1:7,0:7:2.55:45,3,0	1/1:7,1:8:2.94:25,3,0	0/0:9,8:17:0.04:0,0,1	1/1:3,4:7:2.99:25,3,0	0/0:30,0:30:86.37:0,86,1067	0/1:21,0:20:94.71:108,0,95	0/1:2,0:2:1.43:12,0,1	0/1:10,3:13:0.03:1,0,0	0/0:1,1:2:0.47:0,0,1	0/0:33,0:33:97.05:0,97,1150	0/0:24,0:24:68.14:0,68,844	0/0:39,0:39:99:0,100,1218	1/1:3,2:4:3:25,3,0	1/1:18,4:25:1.43:257,1,0	1/1:2,6:8:12.02:121,12,0	1/1:5,4:9:2.37:84,2,0
chr10	79104269	.	TCTATA	T	379.81	PASS	AB=0.762;AC=12;AF=0.222;AN=54;BaseQRankSum=7.243;DP=458;FS=8.404;HRun=0;HaplotypeScore=178.7689;InbreedingCoeff=0.0954;MQ=53.11;MQ0=4;MQRankSum=-5.459;QD=3.88;ReadPosRankSum=-3.362;VQSLOD=1.1529;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:10.46:0,10,318	0/0:2,2:4:6.02:0,6,168	0/0:47,0:34:79.31:0,79,2892	0/0:35,0:25:45.66:0,46,1657	1/1:6,7:13:11.78:104,12,0	0/0:34,0:34:99:0,99,3125	0/0:19,0:19:51.17:0,51,1563	0/1:13,0:13:3.70:4,0,814	0/0:1,0:1:3.01:0,3,100	0/1:3,2:5:48.87:49,0,181	0/0:2,1:3:0.86:0,1,1	0/1:5,3:8:2.27:2,0,60	0/0:7,3:10:18.02:0,18,509	0/1:3,3:6:3.53:4,0,167	0/0:7,9:16:16.73:0,17,494	0/1:4,2:6:23.44:23,0,93	0/0:32,0:32:93.31:0,93,3046	0/0:22,0:21:22.91:0,23,1790	0/0:4,0:4:8.62:0,9,158	0/1:7,3:10:21.06:21,0,179	./.	0/0:33,0:33:88.62:0,89,2802	0/0:23,0:23:69.22:0,69,2172	0/0:41,0:41:99:0,103,3257	1/1:3,2:4:2.42:9,2,0	0/1:18,4:22:97.24:97,0,1447	0/1:4,6:10:99:204,0,278	0/0:9,0:9:12.77:0,13,736
chr10	79104282	.	T	TATTTG	1857.52	PASS	AB=0.923;AC=29;AF=0.518;AN=56;BaseQRankSum=9.249;DP=472;FS=91.778;HRun=0;HaplotypeScore=182.7334;InbreedingCoeff=0.6777;MQ=54.31;MQ0=5;MQRankSum=-9.429;QD=17.20;ReadPosRankSum=-4.193;VQSLOD=-0.5786;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:14.18:0,14,288	1/1:2,2:4:6.02:109,6,0	0/0:49,0:33:90.31:0,90,1936	0/0:37,0:26:65.55:0,66,1312	1/1:5,5:11:12.42:167,12,0	0/0:35,0:35:99:0,102,2330	0/0:21,0:21:57.13:0,57,1071	0/1:10,0:10:19.85:141,0,20	1/1:1,0:1:3.01:57,3,0	1/1:3,1:4:5.52:131,6,0	1/1:1,2:3:0.09:1,0,0	1/1:6,0:6:6.02:89,6,0	1/1:10,0:10:18.04:285,18,0	1/1:6,0:6:9.03:134,9,0	1/1:9,7:16:8.78:270,9,0	1/1:4,3:7:9.03:142,9,0	0/0:35,0:35:99:0,102,2252	0/0:25,0:24:68.92:0,69,1341	1/1:4,0:4:9:89,9,0	1/1:3,7:10:13.39:205,13,0	0/1:1,0:1:0:0,0,0	0/0:31,0:32:90.16:0,90,1933	0/0:25,0:25:72.25:0,72,1629	0/0:43,0:43:98.87:0,99,2275	1/1:5,0:5:4.37:35,4,0	0/0:26,0:26:68.64:0,69,1187	0/1:7,3:10:94.94:200,0,95	0/0:8,0:8:24.08:0,24,558
chr10	79104324	.	GGTGTGTGTTTGTAT	G	2491.60	PASS	AC=14;AF=0.269;AN=52;BaseQRankSum=7.511;DP=461;FS=0.000;HRun=0;HaplotypeScore=217.4839;InbreedingCoeff=0.6074;MQ=52.82;MQ0=7;MQRankSum=-6.864;QD=30.39;ReadPosRankSum=1.846;VQSLOD=2.6150;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,14:27:4.49:270,4,0	0/0:3,0:3:0.47:0,0,1	0/0:57,0:37:75.14:0,75,2540	0/0:39,0:25:60.15:0,60,2093	0/0:10,0:10:0.68:0,1,2	0/0:28,0:28:75.26:0,75,4439	0/0:30,0:30:72.25:0,72,4157	0/0:3,0:3:3:0,3,27	1/1:4,0:5:0.21:1,0,0	0/0:5,0:5:15.05:0,15,220	0/0:3,0:3:0.57:0,1,1	./.	1/1:4,0:4:0.89:2,1,0	./.	1/1:7,0:7:2.48:19,2,0	0/0:8,0:8:1.37:0,1,4	0/0:27,0:26:73.07:0,73,3623	0/0:27,0:26:72.25:0,72,4011	0/0:6,0:5:9.91:0,10,127	0/0:6,0:6:2.12:0,2,5	0/0:3,0:3:0.35:0,0,0	0/0:37,0:37:74.50:0,74,5479	0/0:25,0:25:72.22:0,72,4252	0/0:51,0:51:99:0,121,6063	1/1:4,0:3:0.46:1,0,0	1/1:13,12:24:29.86:1662,30,0	0/0:6,0:6:3.47:0,3,48	1/1:3,5:8:21.02:667,21,0
chr10	79104327	.	GTGTGTTTGTA	G	1723.64	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=9.552;DP=492;FS=26.065;HRun=0;HaplotypeScore=207.8017;InbreedingCoeff=0.2715;MQ=49.28;MQ0=9;MQRankSum=-7.901;QD=11.12;ReadPosRankSum=0.192;VQSLOD=1.3004;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:32:99:116,0,140	1/1:3,0:3:2.78:37,3,0	0/0:56,0:34:90.88:0,91,2760	0/0:43,0:25:59.36:0,59,2122	1/1:11,1:12:11.46:123,11,0	0/0:29,0:29:84.28:0,84,3916	0/0:31,0:31:87.18:0,87,3619	0/0:3,0:3:3.01:0,3,30	1/1:9,0:8:3.27:37,3,0	0/1:7,0:7:34.43:34,0,101	1/1:3,0:3:0.47:1,0,0	0/1:5,0:5:11.46:11,0,13	1/1:4,0:4:3.90:38,4,0	1/1:5,0:5:1.41:2,1,0	1/1:5,2:7:8.90:170,9,0	1/1:6,2:8:4.58:69,5,0	0/0:26,0:25:71.87:0,72,3088	0/0:29,0:28:78.25:0,78,3495	0/1:9,0:7:8.40:8,0,100	1/1:7,0:7:3.79:48,4,0	0/0:5,0:5:0.46:0,0,1	0/0:37,0:37:99:0,110,4623	0/0:27,0:27:81.27:0,81,3663	0/0:51,0:51:99:0,131,5227	1/1:2,1:2:3.48:38,3,0	0/1:24,0:23:99:775,0,122	0/1:7,0:7:20.94:65,0,21	0/1:9,0:9:14.94:319,0,15
chr10	79104331	.	GTTTGTA	G	910.93	PASS	AB=0.996;AC=29;AF=0.518;AN=56;BaseQRankSum=10.165;DP=516;FS=29.350;HRun=0;HaplotypeScore=184.5035;InbreedingCoeff=0.3172;MQ=49.52;MQ0=8;MQRankSum=-9.155;QD=5.62;ReadPosRankSum=-0.907;VQSLOD=1.2793;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,1:33:99:100,0,120	1/1:3,0:3:2.75:16,3,0	0/0:58,0:35:93.62:0,94,2546	0/0:45,0:24:59.38:0,59,1911	1/1:11,0:11:11.69:63,12,0	0/0:30,0:30:90.30:0,90,3008	0/0:36,0:36:99:0,102,3006	0/0:2,0:2:3.01:0,3,38	1/1:10,0:9:2.91:18,3,0	0/1:7,0:7:30.61:31,0,62	1/1:3,0:3:0.24:1,0,0	1/1:6,0:6:6.86:41,7,0	1/1:2,0:2:3.40:18,3,0	1/1:5,0:5:1.41:2,1,0	1/1:6,0:6:8.51:78,9,0	1/1:8,0:8:4.48:28,4,0	0/0:25,1:25:44.13:0,44,2328	0/0:27,1:28:41.64:0,42,2608	0/1:9,0:7:37.38:37,0,38	1/1:8,0:8:6.03:36,6,0	0/1:6,0:6:0.41:0,0,1	0/0:42,0:42:99:0,126,3824	0/0:31,0:31:93.31:0,93,2992	0/0:52,1:54:99:0,128,4356	1/1:3,0:2:2.92:17,3,0	0/1:25,0:24:99:419,0,128	0/1:7,0:7:17.09:25,0,17	0/1:9,0:9:26.15:152,0,26
chr10	79104357	.	GCA	G	473.99	PASS	AB=0.756;AC=22;AF=0.393;AN=56;BaseQRankSum=9.186;DP=577;FS=43.104;HRun=0;HaplotypeScore=170.7790;InbreedingCoeff=0.6011;MQ=47.37;MQ0=26;MQRankSum=-8.209;QD=5.71;ReadPosRankSum=-1.225;VQSLOD=1.5179;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:37:43.66:0,44,1063	0/0:2,0:2:0.12:0,0,0	0/0:71,1:30:81.22:0,81,1316	0/0:51,0:26:78.18:0,78,1330	0/0:5,5:9:0.82:0,1,2	0/0:33,0:33:99:0,99,1892	0/0:41,0:41:99:0,123,2306	0/1:9,2:5:5.23:63,0,5	0/0:3,4:8:0.98:0,1,2	1/1:3,7:9:25.21:233,25,0	1/1:1,3:4:0.05:1,0,0	1/1:0,7:7:5.76:28,6,0	1/1:0,1:1:0.47:1,0,0	1/1:0,4:4:1.41:4,1,0	0/0:4,5:9:2.30:0,2,50	1/1:9,1:10:1.34:27,1,0	0/0:25,0:24:50.79:0,51,1270	0/0:33,1:34:50.96:0,51,1693	1/1:9,4:7:20.96:223,21,0	1/1:3,5:8:1.68:3,2,0	1/1:3,3:7:0.35:2,0,0	0/0:46,0:46:99:0,138,2603	0/0:38,0:38:99:0,111,2130	0/0:44,0:44:99:0,120,2370	0/1:1,1:2:0:0,0,0	0/0:35,0:35:87.86:0,88,1630	1/1:3,0:4:5.76:37,6,0	0/0:7,0:7:7.23:0,7,177
chr10	79104366	.	TGC	T	334.43	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=9.501;DP=599;FS=64.393;HRun=0;HaplotypeScore=188.4296;InbreedingCoeff=0.6363;MQ=48.57;MQ0=24;MQRankSum=-8.284;QD=3.52;ReadPosRankSum=-1.414;VQSLOD=0.3428;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:63.40:0,63,552	0/0:2,0:2:0.12:0,0,0	0/0:67,0:30:84.23:0,84,1538	0/0:60,0:36:73.41:0,73,1633	0/0:9,0:8:0.90:0,1,2	0/0:31,0:31:64.26:0,64,1723	0/0:42,0:42:99:0,123,2329	1/1:9,1:4:7.75:68,8,0	0/0:8,0:8:0.98:0,1,2	1/1:11,0:10:28.83:170,29,0	1/1:5,0:4:0.05:1,0,0	1/1:8,1:9:5.77:33,6,0	1/1:1,0:1:0.47:1,0,0	1/1:3,1:4:1.41:4,1,0	0/1:12,0:12:5.53:6,0,9	1/1:10,0:10:1.34:34,1,0	0/0:26,1:26:44.23:0,44,1199	0/0:33,0:33:56.69:0,57,1514	1/1:14,0:8:23.49:144,23,0	1/1:9,0:9:1.20:2,1,0	1/1:6,0:6:0.35:2,0,0	0/0:46,0:46:99:0,135,2698	0/0:38,0:38:99:0,111,2099	0/0:47,0:47:99:0,129,2585	0/0:2,0:2:1.54:0,2,5	0/0:40,0:40:99:0,116,1100	1/1:4,0:4:5.44:26,5,0	0/0:7,0:7:16.90:0,17,117
chr10	79104367	.	GCA	G	170.29	PASS	AB=0.968;AC=22;AF=0.393;AN=56;BaseQRankSum=10.299;DP=602;FS=23.605;HRun=0;HaplotypeScore=188.1624;InbreedingCoeff=0.5132;MQ=48.52;MQ0=24;MQRankSum=-9.834;QD=1.26;ReadPosRankSum=-0.490;VQSLOD=1.1524;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:41,3:43:26.01:26,0,57	0/0:2,0:2:0.12:0,0,0	0/0:67,2:31:87.23:0,87,1561	0/0:61,1:38:72.49:0,72,1776	0/0:9,0:8:0.90:0,1,2	0/0:31,0:31:53.66:0,54,1699	0/0:42,0:42:99:0,123,2343	0/1:10,0:4:0.75:22,0,1	0/0:6,2:8:0.98:0,1,2	1/1:8,3:10:8.89:91,9,0	1/1:4,1:4:0.05:1,0,0	1/1:9,0:9:5.61:19,6,0	1/1:1,0:1:0.47:1,0,0	1/1:4,0:4:1.41:4,1,0	1/1:11,1:12:3.49:8,3,0	1/1:10,0:10:1.29:16,1,0	0/0:26,1:26:25.01:0,25,1153	0/0:31,1:32:19.95:0,20,1401	1/1:11,3:8:9.76:119,10,0	1/1:8,1:9:1.20:2,1,0	1/1:5,1:6:0.35:2,0,0	0/0:46,0:46:99:0,135,2692	0/0:38,0:38:99:0,108,2070	0/0:47,0:47:99:0,129,2575	0/0:2,0:2:1.54:0,2,5	0/0:41,0:41:47.28:0,47,251	0/0:3,1:4:2.60:0,3,6	0/0:7,0:7:2.08:0,2,37
chr10	79104369	.	ATG	A	2598.40	PASS	AB=0.795;AC=22;AF=0.393;AN=56;BaseQRankSum=8.392;DP=611;FS=3.488;HRun=0;HaplotypeScore=194.4171;InbreedingCoeff=0.5446;MQ=48.40;MQ0=23;MQRankSum=-4.649;QD=15.65;ReadPosRankSum=-1.904;VQSLOD=3.4085;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,32:47:80.20:1049,80,0	0/0:4,0:4:0.13:0,0,0	0/0:65,0:30:69.15:0,69,1084	0/0:60,0:36:60.81:0,61,1285	0/0:8,1:8:0.90:0,1,2	0/0:33,0:33:60.79:0,61,1275	0/0:42,0:42:99:0,105,1763	0/1:6,6:6:7.15:7,0,78	0/0:8,0:8:0.98:0,1,2	0/0:12,0:11:0.88:0,1,69	1/1:5,0:4:0.05:1,0,0	1/1:9,0:9:5.14:13,5,0	1/1:2,0:2:0.47:1,0,0	1/1:4,0:4:1.41:4,1,0	0/1:11,1:12:2.16:34,0,2	1/1:11,0:11:1.29:16,1,0	0/0:27,1:27:7.66:0,8,837	0/0:28,0:31:70.12:0,70,779	0/0:13,0:8:11.57:0,12,31	1/1:9,0:9:1.20:2,1,0	1/1:6,0:6:0.35:2,0,0	0/0:45,0:45:99:0,123,2028	0/0:39,0:39:99:0,102,1725	0/0:46,0:46:99:0,120,1994	0/0:2,0:2:1.54:0,2,5	1/1:1,40:41:99:1466,114,0	0/0:8,0:8:7.74:0,8,47	1/1:3,4:7:12.04:153,12,0
chr10	79104377	.	G	GTA	965.86	PASS	AB=0.800;AC=32;AF=0.571;AN=56;BaseQRankSum=10.921;DP=642;FS=78.935;HRun=0;HaplotypeScore=226.2262;InbreedingCoeff=0.5966;MQ=47.20;MQ0=18;MQRankSum=-9.492;QD=5.28;ReadPosRankSum=-4.229;VQSLOD=-0.0568;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:79.09:0,79,444	1/1:2,2:4:0.98:3,1,0	0/0:60,0:27:75.15:0,75,1030	0/0:64,0:39:99:0,111,1443	0/1:4,8:11:0.22:0,0,2	0/0:33,0:33:90.24:0,90,1274	0/0:39,0:39:99:0,108,1600	1/1:12,1:6:14.07:131,14,0	1/1:3,6:9:0.21:0,0,0	1/1:7,6:13:18.19:341,18,0	1/1:1,4:4:0.22:1,0,0	1/1:2,8:10:5.84:42,6,0	1/1:5,1:6:0.47:1,0,0	1/1:2,3:5:1.83:4,2,0	1/1:3,9:12:6.29:61,6,0	1/1:4,8:12:2.18:48,2,0	0/0:26,0:25:65.97:0,66,889	0/1:31,0:31:28.24:28,0,299	1/1:11,9:14:2.85:331,3,0	1/1:3,8:11:1.35:3,1,0	1/1:2,4:6:0.50:2,1,0	0/0:44,0:44:99:0,129,1880	0/0:38,0:38:99:0,108,1597	0/0:51,0:51:99:0,144,1999	1/1:3,1:4:0.47:1,0,0	0/0:45,0:45:60.63:0,61,553	1/1:6,3:9:8.51:130,9,0	0/0:9,0:9:6.47:0,6,124
chr10	79104401	.	TACG	T	2837.91	PASS	AB=0.550;AC=30;AF=0.536;AN=56;BaseQRankSum=12.585;DP=588;FS=130.638;HRun=0;HaplotypeScore=195.2683;InbreedingCoeff=0.8552;MQ=55.00;MQ0=8;MQRankSum=-10.899;QD=28.38;ReadPosRankSum=0.131;VQSLOD=0.4398;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,3:55:87.86:0,88,2929	1/1:0,3:3:9.03:141,9,0	0/0:47,0:31:73.82:0,74,1645	0/0:54,0:40:99:0,108,2378	1/1:1,7:7:11.88:219,12,0	0/0:40,0:40:99:0,117,2722	0/0:46,0:46:99:0,138,3372	1/1:3,3:5:3.01:55,3,0	1/1:1,7:8:15.05:272,15,0	1/1:2,6:8:18.06:330,18,0	0/1:1,2:3:0:1,0,0	1/1:0,6:6:9.02:137,9,0	1/1:0,7:7:18.06:331,18,0	1/1:0,3:3:6.02:110,6,0	1/1:1,9:10:21.07:358,21,0	1/1:0,8:8:18.06:331,18,0	0/0:26,0:25:75.26:0,75,1812	0/0:28,1:29:30.39:0,30,1720	1/1:3,2:3:6.02:111,6,0	1/1:1,10:11:9.23:166,9,0	0/1:0,2:2:0:0,0,0	0/0:36,0:36:99:0,108,2560	0/0:39,0:39:99:0,117,2705	0/0:53,0:53:99:0,141,3415	1/1:0,3:3:9.03:164,9,0	0/0:49,0:49:99:0,135,3227	1/1:1,7:8:18.06:322,18,0	0/0:9,0:9:24.08:0,24,590
chr10	79104402	.	ACGG	A	1926.89	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=12.729;DP=579;FS=124.759;HRun=0;HaplotypeScore=194.9052;InbreedingCoeff=0.8560;MQ=55.49;MQ0=7;MQRankSum=-10.950;QD=21.41;ReadPosRankSum=-0.198;VQSLOD=0.7151;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,1:55:99:0,107,3017	1/1:3,0:3:8.98:97,9,0	0/0:48,0:30:78.06:0,78,1607	0/0:55,0:40:99:0,102,2184	1/1:7,1:7:12.51:157,13,0	0/0:39,0:39:99:0,117,2672	0/0:46,0:46:99:0,138,3267	1/1:5,1:5:3.01:38,3,0	1/1:7,0:7:15.52:188,16,0	1/1:6,0:6:18.06:230,18,0	1/1:2,1:3:0.47:1,0,0	1/1:6,0:6:9.29:91,9,0	1/1:7,0:7:18.53:231,19,0	1/1:3,0:3:6.02:77,6,0	1/1:9,0:9:21.40:247,21,0	1/1:8,0:8:18.53:231,19,0	0/0:26,0:25:75.21:0,75,1769	0/0:26,1:27:13.23:0,13,1649	1/1:2,0:2:6.02:77,6,0	1/1:10,0:10:9.97:118,10,0	1/1:2,0:2:0.47:1,0,0	0/0:37,0:37:99:0,105,2563	0/0:39,0:39:99:0,114,2628	0/0:56,1:56:99:0,150,3564	1/1:3,0:3:9.03:117,9,0	0/0:50,0:50:99:0,135,3206	1/1:7,0:7:18.06:236,18,0	0/0:9,0:9:27.07:0,27,612
chr10	79104435	.	T	TATTTG	2498.74	PASS	AB=0.944;AC=28;AF=0.519;AN=54;BaseQRankSum=13.284;DP=584;FS=75.370;HRun=0;HaplotypeScore=208.2348;InbreedingCoeff=0.8111;MQ=49.29;MQ0=51;MQRankSum=-11.150;QD=23.35;ReadPosRankSum=-5.689;VQSLOD=0.0771;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:74,0:72:99:0,172,3454	1/1:5,2:7:16.86:268,17,0	0/0:35,0:8:21.07:0,21,396	0/0:46,0:18:44.77:0,45,938	1/1:5,2:6:13.28:146,13,0	0/0:37,0:36:99:0,105,2307	0/0:47,0:46:99:0,132,2826	1/1:4,0:2:3.01:49,3,0	1/1:1,3:4:11.44:145,11,0	0/1:5,0:5:51.35:81,0,51	0/1:7,1:8:0.99:1,0,5	1/1:2,2:4:7.40:152,7,0	1/1:1,6:7:20.98:314,21,0	1/1:4,5:9:23.61:410,24,0	1/1:7,0:6:18.06:220,18,0	1/1:5,2:7:18.06:291,18,0	0/0:28,0:28:78.23:0,78,1660	0/0:28,0:28:70.24:0,70,1318	1/1:3,0:1:3.01:43,3,0	1/1:17,1:18:12.36:128,12,0	./.	0/0:28,0:28:81.28:0,81,1860	0/0:30,0:30:87.30:0,87,1987	0/0:59,0:58:99:0,156,3483	1/1:7,2:9:17.55:148,18,0	0/0:51,0:49:99:0,138,3160	1/1:7,1:8:23.75:312,24,0	0/0:13,0:13:39.13:0,39,892
chr10	79104439	.	T	TG	823.68	PASS	AB=0.702;AC=25;AF=0.463;AN=54;BaseQRankSum=9.369;DP=604;FS=13.483;HRun=0;HaplotypeScore=180.6475;InbreedingCoeff=0.4832;MQ=47.54;MQ0=56;MQRankSum=-8.325;QD=5.68;ReadPosRankSum=-3.088;VQSLOD=2.1142;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:75,0:74:99:0,165,2157	1/1:3,3:9:7.97:91,8,0	0/0:35,0:6:16.59:0,17,193	0/0:47,0:15:39.04:0,39,465	0/1:5,0:8:0.42:1,0,0	0/0:35,0:34:99:0,102,1401	0/0:48,0:47:99:0,123,1659	1/1:2,0:2:2.88:15,3,0	1/1:0,1:4:2.63:120,3,0	0/1:4,2:7:0.10:148,0,0	1/1:3,4:9:3.01:45,3,0	0/1:4,0:6:6.09:58,0,6	0/1:1,0:7:33.56:34,0,36	1/1:2,3:9:10.29:201,10,0	1/1:5,1:6:0.84:15,1,0	1/1:1,1:7:10.14:62,10,0	0/0:27,0:27:75.23:0,75,1024	0/1:21,1:25:35.41:35,0,723	0/0:3,0:1:2.97:0,3,20	1/1:10,5:23:0.41:41,0,0	./.	0/0:32,0:32:87.24:0,87,1171	0/0:33,0:33:96.32:0,96,1339	0/0:57,0:57:99:0,147,2049	1/1:5,1:9:1.38:50,1,0	0/0:51,0:49:99:0,141,1961	1/1:0,3:8:7.80:78,8,0	0/0:13,0:13:39.13:0,39,546
chr10	79104473	.	GGTGT	G	1441.42	PASS	AB=0.686;AC=22;AF=0.423;AN=52;BaseQRankSum=11.070;DP=692;FS=24.091;HRun=0;HaplotypeScore=184.3270;InbreedingCoeff=0.6536;MQ=45.49;MQ0=51;MQRankSum=-9.616;QD=11.72;ReadPosRankSum=-2.499;VQSLOD=1.4897;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:64:99:0,141,2978	1/1:4,9:13:27.30:305,27,0	0/0:51,0:10:30.10:0,30,663	0/0:49,0:12:33.11:0,33,800	1/1:4,8:11:5.93:40,6,0	0/0:38,0:39:96.05:0,96,2069	0/0:47,0:47:99:0,106,2776	0/0:12,0:9:11.50:0,11,153	1/1:1,2:3:5.99:73,6,0	0/1:7,7:11:24.43:377,0,24	1/1:3,10:13:2.76:21,3,0	1/1:0,3:3:5.98:72,6,0	1/1:1,2:3:3.01:33,3,0	1/1:2,5:7:17.62:220,18,0	./.	1/1:4,1:5:2.97:20,3,0	0/0:31,0:31:81.23:0,81,1937	0/0:29,0:30:79.37:0,79,1627	0/0:11,0:5:3.44:0,3,21	0/1:18,13:30:12.10:127,0,12	./.	0/0:43,0:42:99:0,111,2698	0/0:38,0:38:99:0,102,2500	0/0:68,0:70:99:0,140,3785	1/1:4,8:13:7.74:266,8,0	0/0:47,0:48:73.50:0,74,2596	1/1:3,3:5:5.98:72,6,0	0/0:21,0:21:51.18:0,51,1269
chr10	79104480	.	G	GTTTGTA	105.44	PASS	AB=0.969;AC=4;AF=0.074;AN=54;BaseQRankSum=6.785;DP=726;FS=3.920;HRun=0;HaplotypeScore=223.7749;InbreedingCoeff=0.0572;MQ=45.83;MQ0=44;MQRankSum=-5.636;QD=2.77;ReadPosRankSum=-4.593;VQSLOD=1.2445;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:71,0:70:99:0,161,3345	0/0:14,0:14:26.37:0,26,202	0/0:61,0:14:30.99:0,31,761	0/0:57,0:15:38.86:0,39,851	0/0:12,0:11:8.57:0,9,50	0/0:39,0:38:99:0,106,2263	0/0:47,1:47:58.50:0,58,2831	0/0:13,0:10:12.18:0,12,270	0/0:3,0:3:5.95:0,6,63	0/0:14,0:11:22.36:0,22,384	0/0:13,0:13:0.01:0,0,11	0/1:4,0:4:17.98:18,0,53	1/1:4,0:4:0.47:1,0,0	0/0:7,0:7:15.39:0,15,168	./.	0/0:6,0:6:2.30:0,2,16	0/0:30,0:30:87.23:0,87,1959	0/1:28,2:30:99:173,0,1607	0/0:10,0:4:0.44:0,0,36	0/0:33,0:32:15.57:0,16,126	0/0:8,0:7:2.96:0,3,19	0/0:44,0:43:99:0,126,2844	0/0:37,0:36:99:0,102,2481	0/0:66,3:68:12.74:0,13,3790	0/0:14,0:14:23.48:0,23,206	0/0:50,0:48:99:0,138,2969	0/0:8,0:7:4.95:0,5,60	0/0:24,0:24:66.14:0,66,1392
chr10	79104500	.	GCA	G	82.51	PASS	AB=0.782;AC=4;AF=0.077;AN=52;BaseQRankSum=5.787;DP=711;FS=0.000;HRun=0;HaplotypeScore=182.3760;InbreedingCoeff=0.0360;MQ=47.61;MQ0=19;MQRankSum=-4.259;QD=2.36;ReadPosRankSum=-3.256;VQSLOD=1.8375;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:65:99:0,150,2860	0/0:10,1:11:15.05:0,15,236	0/0:55,0:20:52.94:0,53,805	0/0:67,0:32:91.76:0,92,1411	0/0:11,0:11:8.86:0,9,142	0/0:33,0:33:87.62:0,88,1851	0/0:50,1:51:99:0,144,2772	0/1:3,1:4:29.85:30,0,103	0/0:3,0:3:3.01:0,3,50	0/1:15,2:15:99:104,0,385	0/0:17,0:17:14.82:0,15,224	0/0:3,1:4:7.57:0,8,100	0/1:7,1:8:37.93:47,0,38	0/0:6,1:7:11.67:0,12,121	./.	0/1:1,4:6:0:0,0,0	0/0:30,0:30:90.29:0,90,1734	0/0:30,0:30:75.66:0,76,1511	./.	0/0:30,2:31:30.25:0,30,490	0/0:5,0:5:12.04:0,12,196	0/0:45,0:45:99:0,135,2563	0/0:36,0:34:87.22:0,87,1653	0/0:60,0:60:99:0,155,2874	0/0:12,3:16:20.90:0,21,317	0/0:52,0:51:99:0,127,2679	0/0:10,0:9:2.99:0,3,51	0/0:26,0:25:75.26:0,75,1476
chr10	79104512	.	ATGTG	A	1731.07	PASS	AB=0.844;AC=14;AF=0.269;AN=52;BaseQRankSum=10.289;DP=716;FS=36.825;HRun=0;HaplotypeScore=204.8734;InbreedingCoeff=0.5866;MQ=48.31;MQ0=12;MQRankSum=-8.677;QD=13.32;ReadPosRankSum=-1.418;VQSLOD=1.5631;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,144,3387	1/1:3,6:9:15.03:250,15,0	0/0:54,0:21:47.15:0,47,951	0/0:69,0:39:96.31:0,96,1879	1/1:2,10:12:9.03:144,9,0	0/0:34,0:33:87:0,87,2068	0/0:50,0:50:99:0,105,2437	0/0:7,0:7:8.96:0,9,99	./.	0/1:7,11:15:99:476,0,124	1/1:8,8:16:14.75:251,15,0	0/0:4,0:4:3.73:0,4,15	0/1:8,1:9:43.87:44,0,76	0/0:7,0:7:2.89:0,3,17	./.	0/1:7,0:7:0:0,0,0	0/0:33,1:35:52.61:0,53,1963	0/0:32,1:35:16.04:0,16,1688	0/0:6,0:4:6.02:0,6,86	1/1:24,10:33:27.82:440,28,0	1/1:1,6:7:7.04:155,7,0	0/0:47,0:48:99:0,141,3196	0/0:29,0:27:69.18:0,69,1577	0/0:52,0:53:99:0,126,2980	0/1:15,3:18:2.07:134,0,2	0/0:50,1:50:67.47:0,67,2844	0/0:9,1:10:0:0,0,0	0/0:25,0:24:69.24:0,69,1734
chr10	79104513	.	T	TATG	524.75	PASS	AB=0.879;AC=6;AF=0.111;AN=54;BaseQRankSum=5.919;DP=717;FS=0.000;HRun=0;HaplotypeScore=201.7937;InbreedingCoeff=0.4105;MQ=48.23;MQ0=12;MQRankSum=-5.410;QD=16.40;ReadPosRankSum=-4.908;VQSLOD=2.2475;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:59:99:0,144,2616	0/0:9,0:9:13.93:0,14,121	0/0:55,0:21:50.97:0,51,884	0/0:71,0:39:99:0,107,1822	0/0:12,0:12:8.97:0,9,72	0/0:34,0:33:96.24:0,96,1712	0/0:49,0:49:99:0,138,2291	0/0:9,0:9:9.01:0,9,99	1/1:4,0:4:3.01:38,3,0	0/0:18,0:15:42.65:0,43,456	0/0:16,0:16:14.73:0,15,128	1/1:2,2:4:8.62:112,9,0	0/0:9,0:9:9.02:0,9,120	0/1:5,1:6:37.18:136,0,37	./.	0/0:7,0:7:0.40:0,0,1	0/0:35,0:35:99:0,102,1796	0/0:33,0:34:84.24:0,84,1425	0/0:7,0:5:5.96:0,6,48	0/0:34,0:33:28.85:0,29,233	0/0:7,0:7:11.15:0,11,135	0/0:49,0:49:99:0,144,2576	0/0:28,0:26:78.25:0,78,1404	0/0:52,0:52:99:0,135,2425	0/1:16,2:18:44.67:357,0,45	0/0:52,0:51:99:0,145,2523	0/0:10,0:10:2.81:0,3,15	0/0:25,0:24:72.25:0,72,1326
chr10	79104543	.	G	GTGTGTA	4368.55	PASS	AB=0.821;AC=21;AF=0.375;AN=56;BaseQRankSum=11.080;DP=695;FS=43.887;HRun=0;HaplotypeScore=227.7967;InbreedingCoeff=0.0930;MQ=51.32;MQ0=10;MQRankSum=-8.975;QD=22.52;ReadPosRankSum=-3.241;VQSLOD=2.2041;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:59:99:0,148,3432	0/1:11,1:12:88.67:89,0,300	0/0:44,0:25:63.10:0,63,1256	0/0:57,0:38:85.04:0,85,1633	0/1:15,1:16:29.05:100,0,29	0/0:36,0:35:98.10:0,98,2119	0/0:37,0:37:99:0,100,2119	0/1:18,9:18:99:516,0,385	1/1:4,2:6:14.98:443,15,0	0/1:17,3:17:99:272,0,704	0/1:6,5:11:62.41:97,0,62	1/1:0,3:3:9.03:305,9,0	0/1:1,8:10:39.04:409,0,39	0/1:8,3:11:56.99:332,0,57	1/1:5,6:10:14.06:734,14,0	1/1:6,1:7:5.55:212,6,0	0/0:34,0:33:90.29:0,90,2007	0/0:35,0:34:95.69:0,96,2172	0/1:11,0:7:55.58:56,0,198	0/1:14,4:16:58.76:307,0,59	0/1:10,1:11:83.06:83,0,303	0/0:51,0:51:99:0,150,3353	0/0:23,0:22:54.16:0,54,1213	0/0:56,0:55:99:0,150,3286	0/1:10,3:13:58.55:306,0,59	0/0:47,0:47:99:0,126,2691	1/1:0,6:7:3.01:106,3,0	0/0:20,0:20:57.16:0,57,1253
chr10	79104572	.	T	TATTTG	2703.05	PASS	AB=0.904;AC=28;AF=0.500;AN=56;BaseQRankSum=12.740;DP=569;FS=35.181;HRun=0;HaplotypeScore=167.8617;InbreedingCoeff=0.6176;MQ=47.20;MQ0=51;MQRankSum=-11.301;QD=19.73;ReadPosRankSum=-2.479;VQSLOD=1.5520;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,155,3509	1/1:8,2:10:11.74:149,12,0	0/0:42,0:10:29.44:0,29,535	0/0:37,0:11:30.04:0,30,510	0/1:7,2:9:18.37:37,0,18	0/0:29,0:28:87.26:0,87,1848	0/0:29,0:28:84.20:0,84,1776	0/1:19,0:10:17.79:217,0,18	1/1:2,4:6:18.06:434,18,0	0/1:11,1:11:86.08:86,0,166	1/1:7,0:7:5.25:42,5,0	1/1:0,2:2:6.02:143,6,0	1/1:6,1:7:9.03:199,9,0	1/1:3,8:11:28.47:482,28,0	1/1:6,4:10:10.77:359,11,0	1/1:1,3:4:12.04:307,12,0	0/0:25,0:24:63.25:0,63,1506	0/0:40,0:39:99:0,105,2388	1/1:4,1:2:3.01:83,3,0	1/1:12,1:11:12.53:140,13,0	0/1:6,1:7:8.38:39,0,8	0/0:41,0:41:99:0,123,2778	0/0:22,0:21:57.19:0,57,1284	0/0:50,0:49:99:0,135,3028	1/1:9,3:12:16.67:153,17,0	0/0:42,0:42:99:0,123,2836	1/1:3,0:3:3.01:38,3,0	0/0:14,0:14:41.63:0,42,850
chr10	79104576	.	T	TGGTGTG	4337.71	PASS	AB=0.933;AC=31;AF=0.554;AN=56;BaseQRankSum=11.513;DP=570;FS=41.506;HRun=0;HaplotypeScore=173.4004;InbreedingCoeff=0.8112;MQ=47.47;MQ0=53;MQRankSum=-11.250;QD=29.92;ReadPosRankSum=-1.812;VQSLOD=2.8292;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,152,3236	1/1:0,6:9:20.97:668,21,0	0/0:38,0:7:18.50:0,18,215	0/0:36,0:8:16.36:0,16,210	1/1:1,5:9:5.36:85,5,0	0/0:28,0:28:73.87:0,74,1820	0/0:30,0:29:63.18:0,63,1673	1/1:10,0:9:24.05:385,24,0	1/1:2,0:6:17.99:427,18,0	1/1:6,3:10:30.04:655,30,0	1/1:3,0:7:4.62:63,5,0	1/1:0,0:2:6.02:153,6,0	1/1:6,0:7:8.89:124,9,0	1/1:2,0:11:26.89:604,27,0	1/1:3,0:9:14.78:240,15,0	1/1:1,0:4:11.97:282,12,0	0/0:25,0:25:23.26:0,23,1519	0/0:39,0:39:82.99:0,83,2605	1/1:2,0:3:6.02:129,6,0	1/1:3,2:9:14.09:138,14,0	1/1:3,3:7:5.58:129,6,0	0/0:44,0:44:99:0,129,2965	0/0:25,0:24:60.14:0,60,1425	0/0:51,0:50:99:0,139,3081	1/1:9,2:15:13.78:247,14,0	0/0:45,0:46:99:0,101,2756	0/0:3,0:3:0:0,0,0	0/1:13,0:14:7:7,0,574
chr10	79104610	.	GGT	G	1630.19	PASS	AC=28;AF=0.538;AN=52;BaseQRankSum=8.518;DP=595;FS=29.005;HRun=0;HaplotypeScore=133.7684;InbreedingCoeff=0.7627;MQ=46.20;MQ0=49;MQRankSum=-7.675;QD=12.08;ReadPosRankSum=-3.480;VQSLOD=1.3940;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,115,1850	1/1:5,4:9:5.98:58,6,0	0/0:49,0:10:23.76:0,24,322	0/0:45,0:12:30.10:0,30,462	1/1:3,5:8:5.92:39,6,0	0/0:26,0:27:69.71:0,70,1139	0/0:34,0:33:87.27:0,87,1363	1/1:11,20:29:44.20:738,44,0	1/1:4,2:6:5.99:58,6,0	1/1:4,5:8:0.07:171,0,0	1/1:0,8:8:5.95:56,6,0	./.	1/1:2,0:2:2.97:20,3,0	1/1:6,4:9:8.91:61,9,0	1/1:3,1:4:2.88:15,3,0	1/1:3,2:5:2.94:21,3,0	0/0:22,0:21:51.17:0,51,824	0/0:33,0:33:79.12:0,79,1208	./.	1/1:1,10:10:5.80:40,6,0	1/1:1,7:8:9.03:113,9,0	0/0:45,1:46:88.53:0,89,1942	0/0:33,2:34:43.43:0,43,1229	0/0:48,0:47:99:0,126,2004	1/1:2,19:22:37.76:397,38,0	0/0:47,2:49:44.67:0,45,1815	1/1:1,0:1:3.01:36,3,0	0/0:11,0:11:30.10:0,30,480
chr10	79104657	.	A	ATG	14428.52	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=1.293;DP=716;FS=5.994;HRun=0;HaplotypeScore=158.5328;InbreedingCoeff=0.9488;MQ=56.85;MQ0=11;MQRankSum=-7.560;QD=35.80;ReadPosRankSum=3.544;VQSLOD=6.6037;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,35:52:99:2367,135,0	1/1:1,4:5:15.05:274,15,0	0/0:51,0:33:82.07:0,82,1077	0/0:54,0:41:99:0,99,1301	1/1:0,10:10:21.07:384,21,0	0/0:30,0:30:84.27:0,84,1182	0/0:35,0:35:93.28:0,93,1283	1/1:8,31:30:66.23:1189,66,0	1/1:5,12:17:24.08:437,24,0	1/1:3,13:15:42.13:723,42,0	1/1:2,12:14:21.07:383,21,0	1/1:5,5:10:12.04:219,12,0	1/1:4,7:11:24.08:420,24,0	1/1:9,10:19:27.09:484,27,0	1/1:3,7:10:15.05:270,15,0	1/1:4,11:15:21.07:380,21,0	0/0:24,0:24:60.67:0,61,857	1/1:7,19:26:47.68:1049,48,0	1/1:2,1:1:3.01:55,3,0	1/1:4,15:19:36.08:595,36,0	1/1:8,30:38:44.59:773,45,0	0/0:42,0:42:99:0,123,1714	0/0:35,0:34:90.30:0,90,1280	0/0:41,0:41:99:0,99,1411	1/1:1,21:22:48.16:859,48,0	1/1:3,51:55:99:2610,147,0	1/1:2,2:4:9.01:132,9,0	1/1:0,15:17:45.15:824,45,0
chr10	79104706	.	G	GGT	5243.52	PASS	AB=0.704;AC=29;AF=0.518;AN=56;BaseQRankSum=5.205;DP=775;FS=4.720;HRun=0;HaplotypeScore=213.7773;InbreedingCoeff=0.7207;MQ=48.60;MQ0=24;MQRankSum=-9.927;QD=15.65;ReadPosRankSum=0.516;VQSLOD=4.5119;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,111,1306	1/1:5,1:6:3.01:49,3,0	0/0:47,0:27:51.12:0,51,597	0/0:50,0:27:48.13:0,48,568	1/1:9,11:21:5.91:98,6,0	0/0:33,0:32:81.25:0,81,998	0/0:36,0:37:92.77:0,93,1097	1/1:17,28:38:20.50:1290,20,0	1/1:13,7:20:18.06:294,18,0	0/1:15,9:21:9.58:375,0,10	1/1:8,12:19:21.06:303,21,0	1/1:8,6:14:18.06:294,18,0	1/1:9,7:16:12.04:196,12,0	1/1:12,15:27:18.06:294,18,0	0/1:10,8:18:25.04:135,0,25	1/1:16,9:25:4.93:549,5,0	0/0:22,0:25:62.82:0,63,739	0/0:27,0:26:38.36:0,38,509	0/1:5,4:7:16.45:208,0,16	1/1:8,16:27:20.77:307,21,0	1/1:18,21:38:29.04:452,29,0	0/0:39,0:39:99:0,105,1298	0/0:33,0:32:87.26:0,87,1065	0/0:40,0:40:93.16:0,93,1153	1/1:6,9:15:20.88:250,21,0	0/0:49,0:49:99:0,102,1473	1/1:3,6:9:9.03:147,9,0	0/0:10,0:10:24.08:0,24,296
chr10	79104717	.	GTGTCTA	G	1193.55	PASS	AB=0.897;AC=13;AF=0.232;AN=56;BaseQRankSum=8.401;DP=747;FS=0.000;HRun=0;HaplotypeScore=253.6077;InbreedingCoeff=-0.3273;MQ=45.78;MQ0=36;MQRankSum=-8.191;QD=4.63;ReadPosRankSum=-8.382;VQSLOD=-0.1088;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,126,3985	0/1:3,2:5:63.06:63,0,80	0/0:52,0:21:54.15:0,54,1412	0/0:45,0:21:48.15:0,48,1250	0/0:18,2:19:5.89:0,6,165	0/0:32,0:31:88.54:0,89,3002	0/0:37,0:37:99:0,102,3147	0/1:41,5:41:99:519,0,1146	0/0:13,1:14:7.07:0,7,400	0/1:18,5:20:99:300,0,597	0/1:20,0:20:36.36:36,0,238	0/1:10,2:12:14.75:15,0,471	0/1:9,1:11:31.23:31,0,232	0/1:22,2:24:48:48,0,444	0/0:15,1:16:0.54:0,1,259	0/1:19,3:22:95.59:96,0,703	0/0:27,0:27:61.65:0,62,2085	0/0:25,0:24:24.99:0,25,1588	0/1:9,1:7:97.19:97,0,234	0/1:24,2:25:29.81:30,0,380	0/1:31,1:31:41.12:41,0,478	0/0:41,0:41:99:0,123,3962	0/0:34,0:32:93.32:0,93,3152	0/0:40,0:40:99:0,105,3303	0/1:18,1:19:38.53:39,0,210	0/0:49,0:49:99:0,147,4668	0/1:7,1:8:30.59:31,0,264	0/0:10,0:10:24.08:0,24,673
chr10	79104743	.	GGT	G	336.09	PASS	AB=0.991;AC=20;AF=0.357;AN=56;BaseQRankSum=11.508;DP=702;FS=27.090;HRun=0;HaplotypeScore=217.3857;InbreedingCoeff=0.5328;MQ=45.38;MQ0=42;MQRankSum=-9.724;QD=1.49;ReadPosRankSum=-2.585;VQSLOD=1.0029;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,112,1768	1/1:6,0:6:10.77:45,11,0	0/0:40,0:8:6.49:0,6,191	0/0:32,0:9:21.07:0,21,329	0/0:20,0:19:5.83:0,6,37	0/0:30,0:29:64.05:0,64,1011	0/0:30,1:31:43.41:0,43,1258	0/1:36,0:33:58.05:58,0,121	1/1:17,0:17:7.18:27,7,0	1/1:18,0:16:29.66:125,30,0	0/0:13,0:13:9.22:0,9,56	1/1:13,0:13:9.39:36,9,0	1/1:14,0:14:6.42:26,6,0	1/1:27,0:27:4.62:22,5,0	0/1:23,0:23:26.44:33,0,26	1/1:22,0:22:16.52:68,17,0	0/1:25,1:26:6.55:7,0,974	0/0:24,0:23:26.38:0,26,606	0/1:7,0:6:8.96:9,0,33	0/0:23,0:21:2.85:0,3,25	0/0:26,0:25:7.19:0,7,39	0/0:44,1:45:79.51:0,80,1790	0/0:29,0:30:72.24:0,72,1173	0/0:43,0:44:99:0,105,1741	0/0:15,0:15:0.14:0,0,22	0/0:45,1:45:79.49:0,79,1784	1/1:13,0:13:16.19:68,16,0	0/0:8,0:8:15.05:0,15,249
chr10	79104752	.	GTGTGTCTA	G	1190.27	PASS	AB=0.993;AC=18;AF=0.321;AN=56;BaseQRankSum=12.029;DP=674;FS=20.699;HRun=0;HaplotypeScore=256.9770;InbreedingCoeff=0.4587;MQ=45.78;MQ0=48;MQRankSum=-12.367;QD=6.17;ReadPosRankSum=0.622;VQSLOD=1.0592;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:44:99:0,122,4446	1/1:6,0:6:11.01:84,11,0	0/0:42,0:6:13.08:0,13,330	0/0:34,0:7:19.62:0,20,637	0/0:19,0:19:4.21:0,4,25	0/0:24,0:23:70.48:0,70,2932	0/0:30,0:30:86.86:0,87,3232	0/1:32,0:26:99:224,0,203	1/1:14,0:14:14.60:84,15,0	1/1:16,0:14:33.63:238,34,0	0/0:11,1:12:1.15:0,1,20	0/1:11,0:11:3.90:60,0,4	1/1:11,1:12:12.23:134,12,0	0/1:23,0:22:2.86:32,0,3	0/1:21,1:22:92.45:93,0,92	1/1:20,0:20:13.46:124,13,0	0/0:34,0:34:93.29:0,93,2995	0/0:24,0:23:48.24:0,48,1610	0/1:6,0:6:17.99:31,0,18	0/0:20,0:19:2.99:0,3,24	0/0:21,1:21:4.83:0,5,30	0/0:44,0:44:99:0,123,4448	0/0:34,0:34:93.31:0,93,3475	0/0:40,0:40:99:0,111,3998	0/1:16,0:16:24.49:27,0,24	0/0:51,0:49:99:0,138,4960	1/1:13,1:14:23.58:243,24,0	0/0:7,0:7:15.05:0,15,660
chr10	79104754	.	GTGTCTA	G	6151.26	PASS	AB=0.686;AC=30;AF=0.536;AN=56;BaseQRankSum=14.410;DP=660;FS=32.642;HRun=0;HaplotypeScore=216.3354;InbreedingCoeff=0.7820;MQ=45.93;MQ0=44;MQRankSum=-14.306;QD=24.03;ReadPosRankSum=-3.181;VQSLOD=2.6930;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,122,3953	1/1:0,6:6:15.05:318,15,0	0/0:40,0:6:12.80:0,13,395	0/0:33,0:7:21.07:0,21,655	1/1:5,14:19:5.83:70,6,0	0/0:24,0:23:70.48:0,70,2418	0/0:30,0:30:86.91:0,87,2864	0/1:21,11:26:99:914,0,155	1/1:4,10:14:24.08:445,24,0	1/1:4,11:14:36.12:819,36,0	1/1:6,6:12:3.94:77,4,0	1/1:2,8:10:21.03:376,21,0	1/1:5,6:11:15.05:285,15,0	1/1:9,12:20:17.91:283,18,0	0/1:9,13:22:29.63:594,0,30	1/1:7,13:20:39.13:694,39,0	0/0:35,0:35:96.31:0,96,2664	0/0:20,0:22:19.43:0,19,1353	1/1:5,2:6:11.92:203,12,0	1/1:4,13:16:6.26:57,6,0	1/1:13,7:19:9.08:71,9,0	0/0:43,0:43:99:0,123,3856	0/0:31,0:31:93.32:0,93,2923	0/0:41,0:41:99:0,114,3565	1/1:3,12:16:33.06:487,33,0	0/0:51,0:49:99:0,138,4360	1/1:4,9:13:24:458,24,0	0/0:7,0:7:15.05:0,15,535
chr10	79104756	.	GTCTA	G	3527.26	PASS	AB=0.958;AC=30;AF=0.536;AN=56;BaseQRankSum=15.126;DP=647;FS=36.317;HRun=0;HaplotypeScore=202.0325;InbreedingCoeff=0.7735;MQ=46.13;MQ0=42;MQRankSum=-13.787;QD=14.40;ReadPosRankSum=-2.960;VQSLOD=1.5503;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,119,3255	1/1:6,0:6:15.04:168,15,0	0/0:40,0:7:10.97:0,11,362	0/0:32,0:7:21.07:0,21,544	1/1:17,2:19:5.82:45,6,0	0/0:25,0:24:73.49:0,73,1940	0/0:30,0:30:86.91:0,87,2294	0/1:30,0:24:99:429,0,121	1/1:12,0:12:24.07:285,24,0	1/1:14,0:13:36.10:412,36,0	1/1:11,1:12:3.93:43,4,0	1/1:9,0:9:21.03:225,21,0	1/1:11,0:11:15.03:167,15,0	1/1:16,4:19:18.04:209,18,0	0/1:20,2:22:15.12:326,0,15	1/1:15,0:15:39.12:453,39,0	0/0:34,0:34:96.29:0,96,2186	0/0:23,0:22:29.75:0,30,1089	1/1:8,1:6:12.58:99,13,0	1/1:17,0:16:5.72:57,6,0	1/1:18,1:18:5.23:30,5,0	0/0:42,0:42:99:0,123,3179	0/0:32,0:32:96.33:0,96,2388	0/0:41,0:41:99:0,114,2882	1/1:16,0:16:32.57:320,33,0	0/0:49,0:47:99:0,138,3523	1/1:13,0:13:23.99:260,24,0	0/0:7,0:7:15.05:0,15,420
chr10	79104757	.	T	TGC	635.01	PASS	AB=0.938;AC=13;AF=0.232;AN=56;BaseQRankSum=5.417;DP=628;FS=6.524;HRun=0;HaplotypeScore=186.7406;InbreedingCoeff=0.2525;MQ=46.45;MQ0=39;MQRankSum=-5.018;QD=4.23;ReadPosRankSum=-4.970;VQSLOD=1.0244;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,1886	0/1:6,0:6:19.43:19,0,27	0/0:41,0:8:14.88:0,15,218	0/0:32,0:7:21.07:0,21,339	1/1:17,1:18:5.93:70,6,0	0/0:25,0:24:73.44:0,73,1097	0/0:30,0:30:87.25:0,87,1334	0/1:21,4:21:62.64:230,0,63	0/0:12,0:12:14.13:0,14,96	0/0:15,0:13:18.69:0,19,95	1/1:8,1:9:5.64:80,6,0	0/0:8,0:8:17.72:0,18,84	0/0:8,0:8:14.11:0,14,75	0/0:20,0:19:17.14:0,17,89	0/1:21,0:21:70.41:70,0,87	0/0:15,0:15:35.42:0,35,173	0/0:33,0:33:93.14:0,93,1242	0/0:20,0:22:12.29:0,12,579	0/1:8,1:6:6.90:51,0,7	0/1:15,1:15:11.28:16,0,11	1/1:16,1:17:9.85:100,10,0	0/0:41,0:41:99:0,123,1823	0/0:32,0:32:72:0,72,1291	0/0:40,0:40:99:0,114,1755	0/1:14,2:16:73.52:147,0,74	0/0:49,0:47:99:0,138,1992	0/1:12,0:12:10.55:11,0,66	0/0:8,0:8:15.05:0,15,244
chr10	79104780	.	GGT	G	3948.50	PASS	AB=0.681;AC=29;AF=0.518;AN=56;BaseQRankSum=13.536;DP=695;FS=17.985;HRun=0;HaplotypeScore=205.6004;InbreedingCoeff=0.6265;MQ=47.22;MQ0=40;MQRankSum=-12.997;QD=13.90;ReadPosRankSum=-1.014;VQSLOD=2.1570;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:46:99:0,118,1857	1/1:1,6:7:4.53:103,5,0	0/0:55,0:12:25.78:0,26,326	0/0:53,0:11:24.42:0,24,380	0/1:10,7:16:0:0,0,0	0/0:26,0:25:51.17:0,51,835	0/0:29,0:29:75.25:0,75,1218	1/1:14,18:26:28.76:575,29,0	1/1:2,16:18:7.59:332,8,0	0/1:5,12:16:12.08:408,0,12	0/1:4,4:8:0.15:0,0,0	1/1:2,11:13:26:303,26,0	1/1:3,12:15:14.14:373,14,0	1/1:4,16:20:23.11:283,23,0	1/1:8,14:22:19.28:261,19,0	1/1:2,21:23:54.42:695,54,0	0/0:34,0:34:90.31:0,90,1472	0/1:9,7:19:65.03:207,0,65	0/1:6,4:6:9.79:95,0,10	1/1:5,13:16:2.79:18,3,0	1/1:14,4:17:1.86:3,2,0	0/0:35,2:37:55.45:0,55,1449	0/0:31,0:31:84.29:0,84,1364	0/0:39,0:39:99:0,99,1609	1/1:7,6:13:1.52:80,2,0	0/0:46,0:45:99:0,120,1983	1/1:6,7:13:6.82:213,7,0	0/0:15,0:15:42.14:0,42,697
chr10	79104794	.	T	TGC	190.42	PASS	AB=0.903;AC=11;AF=0.196;AN=56;BaseQRankSum=4.430;DP=734;FS=4.474;HRun=0;HaplotypeScore=242.7285;InbreedingCoeff=-0.0227;MQ=52.61;MQ0=24;MQRankSum=-4.792;QD=1.11;ReadPosRankSum=-3.803;VQSLOD=2.0205;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,1984	0/1:8,1:9:37.02:37,0,94	0/0:64,0:23:44.40:0,44,546	0/0:63,0:25:46.62:0,47,598	0/1:12,5:15:0:0,0,0	0/0:22,0:22:59.94:0,60,880	0/0:31,0:31:90.23:0,90,1315	0/0:28,1:26:11.02:0,11,448	0/1:21,1:22:6.93:7,0,296	0/0:16,0:16:43.36:0,43,314	0/0:8,2:9:2.51:0,3,18	0/1:15,1:16:23.48:23,0,194	0/1:17,1:18:6.62:7,0,280	0/0:22,3:25:34.33:0,34,239	0/1:21,5:26:96.86:97,0,166	0/1:25,2:27:42.16:42,0,405	0/0:36,0:35:96.21:0,96,1448	0/0:17,0:18:25.76:0,26,226	0/1:14,1:11:39.58:40,0,119	0/0:16,1:15:2.81:0,3,18	1/1:7,6:12:2.96:38,3,0	0/0:35,0:35:99:0,102,1533	0/0:35,0:35:99:0,102,1482	0/0:38,0:38:99:0,111,1677	0/1:8,1:8:36.11:36,0,105	0/0:46,0:45:99:0,132,2056	0/0:13,2:15:22.14:0,22,173	0/0:15,0:15:45.13:0,45,696
chr10	79104803	.	G	GTATA	232.72	PASS	AB=0.903;AC=9;AF=0.161;AN=56;BaseQRankSum=4.848;DP=753;FS=10.768;HRun=0;HaplotypeScore=283.9576;InbreedingCoeff=-0.0544;MQ=54.52;MQ0=18;MQRankSum=-3.507;QD=1.38;ReadPosRankSum=-3.913;VQSLOD=0.1532;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,2317	0/1:8,1:9:70.38:70,0,293	0/0:67,0:33:89.46:0,89,1421	0/0:64,0:31:53.42:0,53,1353	0/1:18,3:19:0:0,0,0	0/0:21,0:21:60.21:0,60,1174	0/0:28,0:28:81.25:0,81,1516	0/0:35,0:33:5.89:0,6,1265	0/1:22,1:23:34.55:35,0,892	0/1:17,0:17:34.30:34,0,742	0/0:9,2:10:2.93:0,3,60	0/0:17,0:17:35.79:0,36,615	0/1:19,1:20:25.87:26,0,865	0/1:22,3:25:35.50:36,0,576	0/1:24,4:28:99:101,0,498	0/0:27,0:27:63.10:0,63,1129	0/0:36,0:35:99:0,99,1892	0/0:17,0:17:33.86:0,34,459	0/0:13,0:10:24.05:0,24,426	0/0:17,1:16:3.48:0,3,61	0/1:11,5:15:0.01:0,0,1	0/0:38,0:38:99:0,102,1992	0/0:33,0:33:93.27:0,93,1738	0/0:41,0:41:99:0,117,2242	0/1:9,1:9:57.90:58,0,328	0/0:43,0:42:99:0,117,2223	0/0:14,1:15:29.02:0,29,509	0/0:16,0:16:48.16:0,48,945
chr10	79105473	.	CGAGAGGGAGAGGGAGAGGGAGAGGGAGAGG	C	203.56	PASS	AB=1.000;AC=11;AF=0.458;AN=24;BaseQRankSum=0.000;DP=386;FS=0.000;HRun=0;HaplotypeScore=293.5057;InbreedingCoeff=0.3653;MQ=65.89;MQ0=7;MQRankSum=1.246;QD=1.75;ReadPosRankSum=2.037;VQSLOD=2.1912;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:5.95:113,6,0	./.	1/1:29,0:13:0.88:2,1,0	0/0:35,0:26:2.60:0,3,10	./.	0/0:10,0:10:2.99:0,3,49	./.	./.	./.	./.	./.	./.	./.	0/0:6,0:6:0.47:0,0,1	./.	./.	0/1:22,0:21:0:0,0,0	./.	0/0:9,0:7:0:0,0,0	./.	0/0:11,0:10:1.52:0,2,4	./.	1/1:12,0:12:3.01:74,3,0	0/0:21,0:19:1.07:0,1,4	./.	1/1:16,4:20:5.77:58,6,0	./.	1/1:9,0:9:3.01:40,3,0
chr10	79106665	.	TTGG	T	919.47	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.868;DP=592;FS=40.824;HRun=0;HaplotypeScore=98.8110;InbreedingCoeff=0.8436;MQ=48.39;MQ0=50;MQRankSum=-4.674;QD=10.45;ReadPosRankSum=-1.010;VQSLOD=1.3662;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:45:60.54:0,61,1115	0/0:9,0:9:24.06:0,24,293	0/0:11,0:3:5.78:0,6,31	0/0:18,0:9:1.60:0,2,98	0/0:23,0:22:20.47:0,20,456	0/0:15,0:14:25.93:0,26,409	0/0:30,0:24:63.13:0,63,819	0/0:28,0:26:52.64:0,53,766	0/0:23,0:21:33.72:0,34,514	0/0:18,0:17:41.76:0,42,498	0/0:21,0:19:41.59:0,42,356	1/1:8,12:20:23.86:263,24,0	1/1:3,17:20:21.07:261,21,0	1/1:8,16:22:24.06:278,24,0	0/0:16,0:18:10.44:0,10,309	0/0:16,0:13:23.43:0,23,322	0/0:34,0:28:35.56:0,36,609	1/1:11,12:17:21.07:274,21,0	0/0:22,0:22:32.84:0,33,665	0/0:13,0:13:18.07:0,18,341	0/0:14,0:13:28.11:0,28,325	0/0:15,0:15:32.91:0,33,433	0/0:20,0:19:23.43:0,23,388	0/0:21,0:19:37.78:0,38,493	0/0:17,0:17:26.07:0,26,520	0/0:24,0:23:3.41:0,3,588	0/0:19,0:17:8.91:0,9,363	0/0:25,0:21:63.20:0,63,947
chr10	79110613	.	C	CA	1013.83	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.369;DP=640;FS=6.856;HRun=5;HaplotypeScore=59.0643;InbreedingCoeff=0.9969;MQ=60.74;MQ0=2;MQRankSum=1.234;QD=29.82;ReadPosRankSum=0.699;VQSLOD=4.0337;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.21:0,87,935	0/0:7,0:7:21.05:0,21,226	0/0:23,0:16:39.10:0,39,418	0/0:27,0:17:31.62:0,32,367	0/0:32,0:32:84.21:0,84,903	0/0:26,0:26:69.17:0,69,741	0/0:18,0:18:48.08:0,48,506	0/0:35,0:35:96.22:0,96,1019	0/0:22,0:22:57.11:0,57,597	0/0:21,0:21:60.15:0,60,642	0/0:22,0:22:60.15:0,60,645	0/0:19,0:19:57.14:0,57,613	0/0:22,0:22:60.15:0,60,644	0/0:18,0:18:51.11:0,51,539	0/0:30,0:30:84.19:0,84,895	0/0:15,0:15:39.10:0,39,419	0/0:20,0:20:51.13:0,51,547	0/0:19,0:19:38.60:0,39,445	0/0:18,0:15:42.10:0,42,451	0/0:35,0:35:99:0,99,1055	0/0:13,0:13:36.07:0,36,377	0/0:21,0:21:47.98:0,48,515	0/0:26,0:26:75.17:0,75,797	0/0:20,0:19:51.12:0,51,548	0/0:28,0:28:84.19:0,84,893	1/1:2,21:23:33.94:780,34,0	0/0:37,0:37:99:0,108,1160	1/1:2,9:11:27.09:355,27,0
chr10	79111722	.	T	TA	12986.74	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=16.444;DP=627;FS=2.431;HRun=6;HaplotypeScore=132.4633;InbreedingCoeff=0.9915;MQ=59.99;MQ0=4;MQRankSum=0.177;QD=30.99;ReadPosRankSum=0.488;VQSLOD=2.9041;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:30:72.19:888,72,0	1/1:0,8:7:21.07:264,21,0	0/0:26,0:20:39.07:0,39,391	0/0:20,0:19:10.05:0,10,389	1/1:5,39:44:99:1311,105,0	0/0:29,0:29:81.18:0,81,826	0/0:16,0:16:42.09:0,42,428	1/1:6,29:35:90.29:1131,90,0	1/1:0,12:12:33.11:415,33,0	1/1:4,23:27:72.20:878,72,0	1/1:1,13:14:39.12:490,39,0	1/1:1,9:10:24.08:302,24,0	1/1:3,20:23:51.16:642,51,0	1/1:0,23:23:57.18:717,57,0	1/1:2,19:21:57.18:717,57,0	1/1:0,17:17:42.13:528,42,0	0/0:27,0:27:75.17:0,75,765	1/1:4,15:19:51.06:620,51,0	1/1:4,20:17:42.11:514,42,0	1/1:2,23:25:66.21:830,66,0	1/1:4,19:23:48.15:604,48,0	0/0:26,0:26:75.17:0,75,765	0/0:20,0:20:48.10:0,48,489	0/0:15,0:15:39.09:0,39,398	0/0:27,0:27:81.17:0,81,820	1/1:3,22:25:63.20:792,63,0	1/1:1,27:28:75.21:927,75,0	1/1:0,11:11:33.11:415,33,0
chr10	79111947	.	T	TA	12297.22	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=4.833;DP=526;FS=7.277;HRun=5;HaplotypeScore=92.0653;InbreedingCoeff=0.9569;MQ=67.93;MQ0=0;MQRankSum=-1.778;QD=34.16;ReadPosRankSum=-0.744;VQSLOD=4.2876;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,49:51:99:1776,135,0	1/1:0,6:6:18.06:237,18,0	0/0:7,0:6:2.98:0,3,22	0/0:12,0:12:12.75:0,13,62	1/1:3,16:19:45.06:552,45,0	0/0:28,0:28:84.21:0,84,903	0/0:22,0:22:66.15:0,66,700	1/1:2,23:25:69.22:907,69,0	1/1:2,7:9:21.07:276,21,0	1/1:0,23:23:69.22:907,69,0	1/1:1,16:17:42.14:553,42,0	1/1:1,14:15:42.14:553,42,0	1/1:2,14:17:45.15:590,45,0	1/1:0,14:14:42.14:553,42,0	1/1:0,18:18:48.16:631,48,0	1/1:3,17:19:48.16:631,48,0	0/0:20,0:20:54.13:0,54,580	1/1:2,9:11:27.09:355,27,0	1/1:2,9:11:27.09:355,27,0	1/1:2,19:21:57.19:750,57,0	1/1:1,23:24:66.17:848,66,0	0/0:16,0:16:39.09:0,39,418	0/0:19,0:19:51.13:0,51,548	0/0:20,0:20:57.14:0,57,613	0/0:21,0:21:60.15:0,60,645	1/1:2,25:27:72.19:927,72,0	1/1:2,22:24:59.81:779,60,0	1/1:0,8:8:9.03:118,9,0
chr10	79112059	.	T	TAACAAA	8070.06	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=12.305;DP=374;FS=104.337;HRun=0;HaplotypeScore=92.6024;InbreedingCoeff=0.8838;MQ=56.31;MQ0=0;MQRankSum=-7.064;QD=40.96;ReadPosRankSum=-5.338;VQSLOD=0.9410;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:11:3.01:87,3,0	1/1:0,5:7:12.04:406,12,0	0/0:13,0:12:32.87:0,33,615	0/0:10,0:9:21.80:0,22,504	1/1:0,13:19:36.12:1199,36,0	0/0:29,0:29:78.19:0,78,1709	0/0:14,0:14:39.09:0,39,883	1/1:2,6:11:26.99:589,27,0	1/1:1,0:8:6.02:174,6,0	1/1:2,8:19:44.11:1004,44,0	1/1:1,6:12:20.97:550,21,0	1/1:6,0:6:12.04:274,12,0	1/1:3,0:14:8.95:113,9,0	1/1:10,0:10:27:511,27,0	1/1:0,7:10:15.05:485,15,0	1/1:1,5:12:17.55:501,18,0	0/0:22,0:22:60.21:0,60,1436	1/1:4,0:6:14.95:223,15,0	1/1:2,5:6:15.03:437,15,0	1/1:1,4:12:16.21:315,16,0	1/1:1,2:6:3.01:106,3,0	0/0:21,0:21:60.12:0,60,1330	0/0:20,0:20:54.18:0,54,1268	0/0:16,0:16:48.16:0,48,1099	0/0:32,0:32:96.28:0,96,2234	1/1:10,0:8:23.99:386,24,0	1/1:4,9:13:16.33:612,16,0	1/1:2,0:2:6.02:100,6,0
chr10	79112968	.	G	GA	22454.60	PASS	AB=0.857;AC=55;AF=0.982;AN=56;BaseQRankSum=-1.621;DP=680;FS=0.000;HRun=4;HaplotypeScore=223.7950;InbreedingCoeff=-0.0072;MQ=36.20;MQ0=5;MQRankSum=1.719;QD=33.02;ReadPosRankSum=0.763;VQSLOD=2.7969;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:23:60.07:813,60,0	1/1:0,9:9:18.06:269,18,0	1/1:16,2:4:4.82:49,5,0	0/1:10,2:3:19.79:20,0,28	1/1:0,27:26:54.09:718,54,0	1/1:4,26:29:75.18:1064,75,0	1/1:1,23:22:54.14:773,54,0	1/1:3,14:17:42.14:614,42,0	1/1:3,27:29:81.27:1193,81,0	1/1:5,39:41:99:1586,108,0	1/1:1,15:15:42.10:593,42,0	1/1:6,24:27:75.09:1014,75,0	1/1:5,23:24:60.20:875,60,0	1/1:5,26:29:75.18:1065,75,0	1/1:3,36:37:99:1543,105,0	1/1:6,26:28:75.18:1050,75,0	1/1:5,21:24:69.20:985,69,0	1/1:4,10:13:36.09:515,36,0	1/1:2,12:13:33.11:477,33,0	1/1:3,31:34:99:1395,99,0	1/1:3,16:18:33.06:433,33,0	1/1:7,29:36:81.14:1123,81,0	1/1:2,17:19:42.14:608,42,0	1/1:5,9:13:17.96:200,18,0	1/1:4,22:26:63.18:917,63,0	1/1:0,22:21:57.19:853,57,0	1/1:4,30:32:96.26:1352,96,0	1/1:0,11:11:24.08:359,24,0
chr10	79112993	.	T	TA	23346.20	PASS	AB=0.731;AC=54;AF=0.964;AN=56;BaseQRankSum=2.318;DP=662;FS=12.871;HRun=1;HaplotypeScore=229.9779;InbreedingCoeff=-0.0371;MQ=47.70;MQ0=0;MQRankSum=-3.440;QD=35.27;ReadPosRankSum=2.819;VQSLOD=1.6417;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:29:72.14:1007,72,0	1/1:1,7:8:21.04:291,21,0	0/1:4,5:7:23.73:92,0,24	0/1:7,2:9:20.52:204,0,21	1/1:5,18:22:51:663,51,0	1/1:3,24:26:69.22:1010,69,0	1/1:3,24:26:66.09:913,66,0	1/1:1,22:23:69.23:1032,69,0	1/1:4,28:31:81.24:1182,81,0	1/1:4,40:41:99:1613,111,0	1/1:1,13:14:33.11:493,33,0	1/1:1,29:27:69.11:958,69,0	1/1:5,29:30:69.08:933,69,0	1/1:3,28:28:72.21:1053,72,0	1/1:3,34:35:90.26:1321,90,0	1/1:4,27:27:72.17:1029,72,0	1/1:3,18:19:51.13:738,51,0	1/1:3,9:11:30.08:427,30,0	1/1:3,10:13:30.10:449,30,0	1/1:2,27:29:81.19:1161,81,0	1/1:1,17:17:36.04:488,36,0	1/1:2,31:33:93.27:1367,93,0	1/1:2,19:21:57.19:853,57,0	1/1:0,15:14:33.03:444,33,0	1/1:0,24:24:72.24:1077,72,0	1/1:2,21:22:66.15:939,66,0	1/1:5,29:32:93.16:1294,93,0	1/1:0,10:10:21.07:314,21,0
chr10	79113456	.	GTTTTGTTTTTGT	G	23200.41	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=14.336;DP=634;FS=13.416;HRun=0;HaplotypeScore=212.4967;InbreedingCoeff=0.9746;MQ=56.15;MQ0=8;MQRankSum=-13.413;QD=53.70;ReadPosRankSum=1.831;VQSLOD=3.3277;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,26:38:45.15:1401,45,0	1/1:4,4:8:6.49:217,6,0	0/0:26,0:12:27.09:0,27,893	0/0:35,0:26:46.74:0,47,1880	1/1:6,23:29:51.17:1617,51,0	0/0:11,0:11:30.10:0,30,1735	0/0:17,0:17:45.15:0,45,2164	1/1:13,13:25:35.73:1040,36,0	1/1:5,37:42:72.25:2591,72,0	1/1:4,23:27:63.22:1960,63,0	1/1:4,12:16:18.06:572,18,0	1/1:8,19:27:32.75:1151,33,0	1/1:3,25:28:50.41:1834,50,0	1/1:6,20:26:36.12:1295,36,0	1/1:2,14:16:39.13:1403,39,0	1/1:2,20:21:39.13:1403,39,0	0/0:23,0:23:63.22:0,63,3516	1/1:5,9:14:15.05:522,15,0	1/1:6,15:19:42.10:978,42,0	1/1:6,13:19:36.12:1208,36,0	1/1:9,15:24:11.94:432,12,0	0/0:25,0:25:69.22:0,69,3619	0/0:25,0:25:60.21:0,60,3093	0/0:26,0:26:69.24:0,69,3810	0/0:13,0:13:39.13:0,39,2115	1/1:3,22:25:63.20:2067,63,0	1/1:5,12:17:24.08:864,24,0	1/1:1,6:7:18.06:648,18,0
chr10	79114269	.	TGAACTC	T	1375.83	PASS	AB=0.513;AC=3;AF=0.054;AN=56;BaseQRankSum=6.419;DP=466;FS=21.375;HRun=0;HaplotypeScore=100.7404;InbreedingCoeff=0.5927;MQ=76.64;MQ0=1;MQRankSum=-5.584;QD=59.82;ReadPosRankSum=-1.084;VQSLOD=1.9218;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.15:0,45,1691	0/0:12,0:12:36.12:0,36,1278	0/0:20,0:20:57.20:0,57,1846	0/0:11,0:11:28.35:0,28,958	0/0:25,0:25:75.26:0,75,2637	0/0:24,0:24:69.24:0,69,2531	0/0:19,0:19:54.17:0,54,1849	0/0:28,0:28:84.28:0,84,2951	0/0:13,0:13:36.12:0,36,1353	0/0:19,0:19:57.20:0,57,2144	0/0:14,0:14:39.13:0,39,1408	0/0:19,0:19:57.20:0,57,2034	0/0:18,0:18:51.18:0,51,1822	0/0:10,0:10:30.10:0,30,1067	0/0:13,0:13:36.12:0,36,1242	0/0:20,0:20:60.19:0,60,2140	0/0:15,0:15:45.15:0,45,1659	0/0:9,0:9:27.09:0,27,1016	0/0:16,0:16:48.16:0,48,1716	0/0:25,0:25:72.23:0,72,2523	0/0:12,0:12:36.12:0,36,1275	0/0:22,0:22:66.23:0,66,2323	0/0:19,0:18:54.19:0,54,1910	0/0:16,0:16:45.14:0,45,1604	0/0:9,0:9:27.09:0,27,926	0/1:1,19:20:55.80:1243,0,56	0/0:19,0:19:54.19:0,54,1889	1/1:0,3:3:9.03:231,9,0
chr10	79116094	.	GAA	G	3687.19	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=2.057;DP=324;FS=27.702;HRun=11;HaplotypeScore=139.1322;InbreedingCoeff=0.9412;MQ=63.48;MQ0=0;MQRankSum=-4.915;QD=17.64;ReadPosRankSum=0.370;VQSLOD=0.3721;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:10:8.22:36,8,0	1/1:4,6:10:24.06:255,24,0	0/0:12,0:11:18:0,18,204	0/0:9,0:8:14.90:0,15,182	1/1:4,13:17:38.84:369,39,0	0/0:16,0:16:39.09:0,39,573	0/0:17,0:16:39.09:0,39,573	1/1:5,18:23:54.10:574,54,0	1/1:1,0:10:24.70:107,25,0	1/1:9,13:22:48.08:502,48,0	1/1:3,10:13:20.95:208,21,0	1/1:1,0:12:18.83:99,19,0	1/1:6,0:12:9.83:63,10,0	1/1:2,0:7:16.40:71,16,0	1/1:6,10:16:26.90:259,27,0	1/1:1,7:8:20.98:209,21,0	0/0:10,0:10:18.02:0,18,243	0/0:1,0:10:14.85:0,15,51	1/1:5,6:11:18.01:191,18,0	1/1:1,12:13:30.04:319,30,0	1/1:2,7:10:8.99:149,9,0	0/0:14,0:14:35.99:0,36,454	0/0:9,0:9:18.03:0,18,252	0/0:9,0:9:21.07:0,21,323	0/0:3,0:9:19.37:0,19,70	1/1:2,0:3:8.23:36,8,0	1/1:1,6:7:18.04:191,18,0	1/1:1,0:5:10.97:48,11,0
chr10	79116144	.	CG	C	3914.36	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=1.491;DP=249;FS=0.000;HRun=1;HaplotypeScore=285.9802;InbreedingCoeff=0.4100;MQ=33.05;MQ0=0;MQRankSum=-0.138;QD=15.78;ReadPosRankSum=2.426;VQSLOD=3.2049;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:32.42:220,32,0	1/1:0,5:5:14.74:94,15,0	./.	0/0:1,0:1:1.25:0,1,3	1/1:0,16:16:14.34:80,14,0	1/1:0,13:13:32.59:219,33,0	1/1:0,13:13:38.19:246,38,0	1/1:0,17:17:48.30:321,48,0	1/1:0,6:6:17.79:118,18,0	1/1:0,15:15:42.58:307,43,0	1/1:0,10:10:17.63:109,18,0	1/1:0,16:16:44.27:290,44,0	1/1:0,5:5:11.83:79,12,0	1/1:0,6:6:14.72:95,15,0	1/1:0,13:13:32.42:208,32,0	1/1:0,12:12:32.42:213,32,0	1/1:0,7:7:20.38:125,20,0	1/1:0,8:8:20.89:156,21,0	1/1:0,10:10:29.75:210,30,0	1/1:0,6:6:8.91:60,9,0	1/1:0,11:11:14.61:89,15,0	1/1:0,6:6:11.81:75,12,0	1/1:0,4:4:8.71:50,9,0	1/1:1,12:13:20.50:127,21,0	1/1:0,5:5:14.74:94,15,0	1/1:0,9:9:26.82:193,27,0	1/1:1,5:6:14.73:93,15,0	1/1:0,2:2:5.95:42,6,0
chr10	79116180	.	G	GCA	8276.40	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=2.984;DP=316;FS=3.391;HRun=0;HaplotypeScore=285.6229;InbreedingCoeff=-0.0784;MQ=52.75;MQ0=0;MQRankSum=-4.133;QD=26.19;ReadPosRankSum=7.065;VQSLOD=4.7882;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:28.56:414,29,0	0/1:5,0:5:5.69:70,0,6	0/1:5,0:5:18.89:25,0,19	0/1:9,0:9:27.74:83,0,28	1/1:12,0:12:13.06:139,13,0	1/1:17,0:17:41.01:537,41,0	1/1:20,0:19:30.71:463,31,0	1/1:10,0:10:20.59:215,21,0	1/1:11,0:11:20.08:322,20,0	1/1:12,0:12:18.70:351,19,0	1/1:7,0:7:15.02:153,15,0	1/1:23,0:23:59.77:614,60,0	1/1:10,0:10:19.68:264,20,0	1/1:10,0:10:23.68:342,24,0	1/1:23,0:23:59.90:675,60,0	1/1:14,0:14:32.82:386,33,0	1/1:14,0:14:35.95:377,36,0	1/1:8,0:7:24.03:230,24,0	1/1:11,0:11:26.35:335,26,0	1/1:2,0:2:3:29,3,0	1/1:16,0:16:20.34:292,20,0	1/1:6,0:6:1.56:96,2,0	1/1:6,0:6:8.66:112,9,0	1/1:11,0:11:16.40:304,16,0	1/1:4,0:4:12.02:122,12,0	1/1:12,1:16:42.14:744,42,0	1/1:8,0:8:3.73:129,4,0	1/1:9,0:9:27.09:453,27,0
chr10	79116782	.	G	GGA	9023.44	PASS	AB=0.923;AC=24;AF=0.429;AN=56;BaseQRankSum=13.258;DP=585;FS=1.526;HRun=0;HaplotypeScore=91.0130;InbreedingCoeff=0.8439;MQ=82.25;MQ0=0;MQRankSum=-4.155;QD=31.66;ReadPosRankSum=0.568;VQSLOD=6.8670;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1442	1/1:6,3:9:6.02:102,6,0	0/0:18,0:19:34.83:0,35,469	0/1:18,0:18:1.36:1,0,331	1/1:1,18:19:45.15:765,45,0	0/0:21,0:21:57.16:0,57,713	0/0:21,0:21:51.17:0,51,663	1/1:14,17:31:50.92:860,51,0	0/0:20,0:20:51.17:0,51,663	1/1:7,12:19:3.59:623,4,0	1/1:9,12:21:30.10:510,30,0	0/0:16,0:16:42.14:0,42,546	0/0:24,0:24:66.20:0,66,841	0/0:16,0:16:39.11:0,39,493	1/1:2,22:24:27.99:1015,28,0	1/1:0,19:19:54.18:917,54,0	0/0:27,0:27:72.23:0,72,936	0/0:15,0:15:39.13:0,39,507	1/1:5,20:28:75.21:1196,75,0	1/1:3,22:26:63.22:1067,63,0	1/1:5,16:21:45.15:748,45,0	0/0:14,0:14:27.09:0,27,351	0/0:27,0:27:72.22:0,72,921	0/0:17,0:17:45.15:0,45,583	0/0:20,0:20:51.17:0,51,661	0/1:18,4:22:99:150,0,477	1/1:5,22:28:63.22:1070,63,0	0/0:5,0:5:15.05:0,15,195
chr10	79116928	.	CTGAT	C	10186.82	PASS	AB=0.939;AC=23;AF=0.411;AN=56;BaseQRankSum=16.917;DP=504;FS=31.804;HRun=0;HaplotypeScore=136.3377;InbreedingCoeff=0.9171;MQ=71.78;MQ0=0;MQRankSum=-17.939;QD=40.91;ReadPosRankSum=0.635;VQSLOD=3.2905;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.24:0,69,1791	1/1:1,8:9:21.07:376,21,0	0/0:13,0:13:39.13:0,39,876	0/0:10,0:10:23.52:0,24,456	1/1:1,26:27:69.24:1287,69,0	0/0:15,0:15:42.14:0,42,1102	0/0:21,0:21:63.22:0,63,1654	1/1:4,26:30:78.27:1465,78,0	0/0:14,0:14:42.14:0,42,1110	1/1:3,26:29:78.27:1472,78,0	1/1:2,23:25:66.14:1152,66,0	0/0:23,0:23:69.20:0,69,1802	0/0:21,0:21:63.22:0,63,1661	0/0:19,0:19:54.19:0,54,1397	1/1:1,12:13:36.12:650,36,0	1/1:2,18:20:51.14:926,51,0	0/0:13,0:13:36.11:0,36,911	0/0:9,0:9:27.09:0,27,713	1/1:4,13:17:39.13:734,39,0	1/1:3,14:17:42.10:740,42,0	1/1:0,5:5:9.03:163,9,0	0/0:14,0:14:42.14:0,42,1087	0/0:14,0:14:42.14:0,42,1126	0/0:18,0:18:51.18:0,51,1312	0/0:11,0:11:33.11:0,33,861	0/1:29,2:31:23.48:23,0,2151	1/1:3,23:26:66.18:1198,66,0	0/0:17,0:17:51.18:0,51,1323
chr10	79117810	.	G	GA	307.57	PASS	AB=0.902;AC=16;AF=0.286;AN=56;BaseQRankSum=1.202;DP=230;FS=2.057;HRun=10;HaplotypeScore=44.3198;InbreedingCoeff=0.5400;MQ=51.29;MQ0=13;MQRankSum=-2.558;QD=4.73;ReadPosRankSum=-1.961;VQSLOD=-0.1289;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:20.95:0,21,172	0/0:4,0:4:5.99:0,6,49	0/0:11,1:3:2.98:0,3,23	0/1:17,0:5:4.80:13,0,5	0/0:10,0:10:8.98:0,9,73	0/0:5,0:5:5.99:0,6,49	0/0:6,0:6:11.97:0,12,98	0/0:17,0:16:17.78:0,18,149	1/1:1,0:1:2.74:12,3,0	0/0:4,0:3:8.99:0,9,74	0/0:5,0:3:2.99:0,3,25	1/1:3,2:4:3.01:32,3,0	1/1:7,1:7:5.97:52,6,0	1/1:3,3:6:8.98:84,9,0	0/0:6,0:5:8.99:0,9,73	0/0:7,0:6:14.97:0,15,123	0/0:19,0:17:44.94:0,45,368	1/1:4,6:9:10.76:125,11,0	0/1:5,1:5:19.94:20,0,62	0/0:4,0:4:8.99:0,9,74	0/0:3,0:3:3:0,3,25	0/0:6,0:6:11.97:0,12,98	0/0:9,0:9:14.97:0,15,122	0/0:8,0:8:20.97:0,21,172	0/0:10,0:10:23.96:0,24,196	1/1:4,4:7:11.99:116,12,0	0/0:10,0:10:5.97:0,6,49	1/1:2,1:2:2.96:19,3,0
chr10	79117831	.	A	AAG	1414.14	PASS	AB=1.000;AC=23;AF=0.426;AN=54;BaseQRankSum=3.134;DP=180;FS=1.305;HRun=0;HaplotypeScore=35.2862;InbreedingCoeff=0.6325;MQ=83.92;MQ0=11;MQRankSum=-4.423;QD=26.19;ReadPosRankSum=0.562;VQSLOD=3.8740;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:17.69:0,18,70	1/1:0,3:3:6.02:105,6,0	0/0:32,0:16:25.91:0,26,249	0/0:29,0:10:7.35:0,7,103	./.	0/0:3,0:3:9.03:0,9,121	0/0:2,0:2:6.02:0,6,87	1/1:3,11:12:29.09:359,29,0	0/0:1,0:1:2.04:0,2,6	1/1:1,2:2:6.02:105,6,0	1/1:0,2:1:3.01:53,3,0	0/0:2,0:1:3.01:0,3,34	0/0:4,0:3:9.03:0,9,130	0/0:1,0:1:3.01:0,3,43	1/1:1,3:4:6.02:105,6,0	1/1:0,4:3:9.03:157,9,0	0/0:16,0:15:42.03:0,42,559	0/0:5,0:4:11.95:0,12,147	1/1:2,5:7:20.79:278,21,0	1/1:1,2:3:6.02:105,6,0	1/1:0,1:1:3.01:52,3,0	0/0:4,0:4:12.04:0,12,174	0/0:3,0:3:6.02:0,6,87	0/0:5,0:5:15.05:0,15,217	0/0:4,0:4:7.46:0,7,26	1/1:3,1:4:9.03:144,9,0	1/1:1,2:4:8.85:94,9,0	0/1:3,0:3:14.75:41,0,15
chr10	79117950	.	G	GT	4337.98	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-1.978;DP=252;FS=19.709;HRun=9;HaplotypeScore=40.9400;InbreedingCoeff=0.8883;MQ=84.49;MQ0=0;MQRankSum=-2.147;QD=27.81;ReadPosRankSum=-0.337;VQSLOD=3.1875;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,7:10:20.97:205,21,0	1/1:0,3:3:9.02:100,9,0	0/0:16,0:16:24.09:0,24,196	0/0:9,0:8:15.61:0,16,107	1/1:0,6:7:20.85:212,21,0	0/0:8,0:8:24:0,24,208	0/0:11,1:12:2.81:0,3,253	1/1:5,13:18:30.05:319,30,0	1/1:1,5:6:18.04:191,18,0	1/1:2,9:11:27.07:297,27,0	1/1:0,4:4:11.99:119,12,0	1/1:0,8:8:24.06:265,24,0	1/1:1,6:7:18.05:199,18,0	1/1:1,5:7:21.05:225,21,0	1/1:1,8:9:1.02:239,1,0	1/1:0,7:7:21.06:232,21,0	0/0:13,1:14:5.81:0,6,279	1/1:0,4:4:12.03:133,12,0	1/1:1,9:10:27.07:293,27,0	1/1:2,10:12:33.08:358,33,0	1/1:0,9:9:24.06:265,24,0	0/0:6,0:6:18:0,18,156	0/0:12,0:12:29.97:0,30,260	0/0:9,0:9:26.95:0,27,227	1/1:2,8:10:27.06:292,27,0	0/0:5,0:5:15:0,15,130	1/1:1,13:14:16.03:393,16,0	0/0:5,0:5:15:0,15,130
chr10	79118232	.	A	ATTTC	4110.93	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.456;DP=665;FS=18.159;HRun=0;HaplotypeScore=140.2919;InbreedingCoeff=0.9972;MQ=85.79;MQ0=0;MQRankSum=-9.021;QD=57.10;ReadPosRankSum=0.833;VQSLOD=4.0787;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.20:0,72,1297	0/0:7,0:7:21.07:0,21,398	0/0:26,0:27:57.44:0,57,1195	0/0:17,0:17:33.11:0,33,596	0/0:22,0:22:63.17:0,63,1069	0/0:30,0:30:81.27:0,81,1483	0/0:19,0:19:57.16:0,57,983	0/0:34,0:34:96.32:0,96,1738	0/0:27,0:27:78.23:0,78,1381	0/0:29,0:29:81.27:0,81,1503	0/0:11,0:11:30.10:0,30,569	1/1:1,20:21:36.12:942,36,0	1/1:1,20:21:57.20:1489,57,0	1/1:4,15:19:45.15:1130,45,0	0/0:41,0:41:99:0,105,1960	0/0:23,0:23:63.20:0,63,1157	0/0:24,0:24:66.22:0,66,1221	1/1:4,7:11:21.07:550,21,0	0/0:21,0:21:63.20:0,63,1149	0/0:21,0:21:54.19:0,54,1024	0/0:31,0:31:90.29:0,90,1646	0/0:31,0:31:90.29:0,90,1646	0/0:31,0:31:90.27:0,90,1587	0/0:17,0:17:36.12:0,36,676	0/0:21,0:21:60.19:0,60,1079	0/0:38,0:38:99:0,111,2019	0/0:36,0:35:99:0,99,1873	0/0:9,0:9:27.09:0,27,512
chr10	79118270	.	CTT	C	13098.91	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=4.801;DP=693;FS=6.289;HRun=2;HaplotypeScore=103.9178;InbreedingCoeff=0.9981;MQ=92.58;MQ0=0;MQRankSum=-0.889;QD=45.01;ReadPosRankSum=3.468;VQSLOD=4.7368;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.25:0,72,1457	1/1:0,6:6:18.06:294,18,0	0/0:35,0:35:99:0,105,2007	0/0:24,0:24:62.19:0,62,1287	1/1:0,34:34:90.31:1468,90,0	0/0:32,0:32:96.33:0,96,1941	0/0:20,0:20:60.19:0,60,1161	1/1:0,27:27:81.26:1292,81,0	0/0:25,0:25:75.26:0,75,1524	1/1:0,28:28:84.27:1341,84,0	1/1:0,23:23:60.20:976,60,0	0/0:16,0:16:45.15:0,45,908	0/0:22,0:22:66.19:0,66,1239	0/0:24,0:24:72.20:0,72,1407	1/1:0,34:34:87.30:1419,87,0	1/1:0,21:21:57.19:930,57,0	0/0:28,0:28:84.26:0,84,1653	0/0:7,0:7:21.07:0,21,426	1/1:0,24:24:72.25:1170,72,0	1/1:0,25:25:75.26:1224,75,0	1/1:0,28:28:75.26:1224,75,0	0/0:30,0:30:90.31:0,90,1816	0/0:27,0:27:81.28:0,81,1627	0/0:21,0:21:60.19:0,60,1183	0/0:23,0:23:69.24:0,69,1392	0/0:35,0:35:99:0,105,2107	1/1:0,41:41:99:1762,108,0	0/0:9,0:9:27.09:0,27,549
chr10	79118575	.	GA	G	1410.77	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.124;DP=606;FS=1.732;HRun=8;HaplotypeScore=69.5434;InbreedingCoeff=0.9982;MQ=75.14;MQ0=0;MQRankSum=-10.340;QD=23.51;ReadPosRankSum=0.061;VQSLOD=4.1852;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.18:0,63,749	0/0:8,0:8:24.07:0,24,290	0/0:17,0:17:42.08:0,42,475	0/0:10,0:10:24.05:0,24,272	0/0:36,0:36:99:0,105,1268	0/0:25,0:25:66.18:0,66,775	0/0:13,0:13:36.11:0,36,435	0/0:27,0:28:78.07:0,78,903	0/0:20,0:20:55.04:0,55,643	0/0:25,0:25:72.22:0,72,862	0/0:25,0:25:66.20:0,66,797	1/1:3,10:13:36.02:339,36,0	1/1:4,15:19:51.06:486,51,0	1/1:1,17:18:48.08:463,48,0	0/0:30,0:30:78.24:0,78,942	0/0:28,1:29:52.27:0,52,892	0/0:29,0:29:75.22:0,75,894	1/1:2,8:10:30.03:283,30,0	0/0:13,0:13:33.10:0,33,398	0/0:39,0:39:99:0,105,1257	0/0:10,0:10:27.07:0,27,315	0/0:27,0:27:72.22:0,72,870	0/0:22,0:22:60.04:0,60,692	0/0:13,0:13:36.11:0,36,435	0/0:35,0:35:99:0,99,1196	0/0:32,0:32:87.27:0,87,1051	0/0:23,0:24:66.02:0,66,765	0/0:12,0:12:36.11:0,36,435
chr10	79118591	.	GT	G	1908.30	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.264;DP=616;FS=3.094;HRun=3;HaplotypeScore=68.7040;InbreedingCoeff=0.9943;MQ=74.79;MQ0=0;MQRankSum=-8.570;QD=30.78;ReadPosRankSum=-0.170;VQSLOD=3.4570;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.22:0,66,949	0/0:8,0:8:24.08:0,24,346	0/0:19,0:19:54.17:0,54,742	0/0:8,0:8:18.06:0,18,259	0/0:39,0:39:99:0,117,1667	0/0:19,0:19:57.19:0,57,821	0/0:18,0:18:54.18:0,54,777	0/0:43,0:43:99:0,123,1739	0/0:15,0:15:45.15:0,45,647	0/0:27,0:27:81.27:0,81,1162	0/0:28,0:28:84.25:0,84,1157	1/1:2,13:15:22.18:462,22,0	1/1:0,16:16:45.14:557,45,0	1/1:1,20:21:60.18:730,60,0	0/0:26,0:26:78.25:0,78,1103	0/0:28,1:29:50.17:0,50,1173	0/0:27,0:27:75.22:0,75,1055	1/1:2,8:10:27.06:319,27,0	0/0:15,0:15:45.15:0,45,648	0/0:39,0:39:99:0,117,1679	0/0:8,0:8:21.07:0,21,302	0/0:25,0:25:75.25:0,75,1080	0/0:24,0:24:63.20:0,63,904	0/0:13,0:13:39.13:0,39,562	0/0:34,0:34:99:0,102,1429	0/0:33,0:33:99:0,99,1407	0/0:23,0:23:66.20:0,66,930	0/0:12,0:12:24.08:0,24,346
chr10	79119141	.	TA	T	2368.27	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.259;DP=712;FS=0.380;HRun=11;HaplotypeScore=71.1567;InbreedingCoeff=0.9933;MQ=73.97;MQ0=0;MQRankSum=-2.447;QD=16.80;ReadPosRankSum=1.253;VQSLOD=4.4985;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,34:37:86.90:714,87,0	0/0:14,1:15:14.44:0,14,346	0/0:17,0:16:19.38:0,19,157	0/0:18,0:18:34.69:0,35,356	0/0:32,0:32:84.21:0,84,893	0/0:11,1:12:30.08:0,30,320	0/0:24,0:24:60.14:0,60,631	0/0:29,0:30:75.02:0,75,781	1/1:6,22:28:35.75:444,36,0	0/0:27,0:27:69.11:0,69,710	0/0:18,0:18:42.11:0,42,448	0/0:32,1:33:87.19:0,87,916	0/0:14,0:14:33.08:0,33,352	0/0:27,0:28:62.97:0,63,639	0/0:35,0:34:87.22:0,87,928	0/0:25,1:26:44.50:0,45,661	0/0:29,0:29:81.12:0,81,834	0/0:14,0:14:39.04:0,39,395	0/0:22,0:23:50.75:0,51,494	0/0:32,1:33:59.56:0,60,833	0/0:26,0:26:72.14:0,72,749	0/0:24,0:26:69:0,69,706	0/0:13,0:13:33.08:0,33,349	0/0:47,0:47:99:0,132,1387	1/1:5,22:27:28.05:436,28,0	1/1:2,31:34:94.91:766,95,0	0/0:31,0:31:78.20:0,78,832	1/1:3,12:15:23.55:183,24,0
chr10	79119490	.	T	TTAA	2638.13	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-6.685;DP=491;FS=12.303;HRun=0;HaplotypeScore=65.3300;InbreedingCoeff=0.9353;MQ=72.79;MQ0=0;MQRankSum=-1.668;QD=45.48;ReadPosRankSum=1.729;VQSLOD=4.8703;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1561	0/0:10,0:10:30.10:0,30,499	0/0:8,0:8:12.73:0,13,290	0/0:12,0:11:2.29:0,2,196	0/0:26,0:26:78.24:0,78,1233	0/0:24,0:24:66.20:0,66,1093	0/0:9,0:9:27.09:0,27,458	0/0:30,0:30:90.15:0,90,1415	0/0:7,0:7:21.07:0,21,356	0/0:25,0:25:74.05:0,74,1185	0/0:15,0:15:45.14:0,45,709	1/1:0,10:10:21.07:471,21,0	1/1:1,11:14:24.08:541,24,0	1/1:0,20:21:51.18:1156,51,0	0/0:16,0:16:48.14:0,48,769	0/0:15,0:15:45.14:0,45,734	0/0:23,0:23:63.11:0,63,1017	1/1:0,12:13:27.09:629,27,0	0/0:22,0:22:61.47:0,61,940	0/0:23,0:23:66.15:0,66,990	0/0:6,0:6:18.06:0,18,296	0/0:11,0:11:33.10:0,33,533	0/0:22,0:21:66.22:0,66,1090	0/0:10,0:10:30.10:0,30,509	0/0:22,0:22:66.22:0,66,1084	0/0:25,0:25:75.03:0,75,1135	0/0:19,0:19:57.19:0,57,915	0/0:19,0:19:57.20:0,57,965
chr10	79121873	.	G	GTA	162.65	PASS	AB=0.976;AC=4;AF=0.074;AN=54;BaseQRankSum=1.734;DP=396;FS=5.672;HRun=0;HaplotypeScore=83.5873;InbreedingCoeff=0.4909;MQ=74.61;MQ0=1;MQRankSum=0.594;QD=3.78;ReadPosRankSum=-0.925;VQSLOD=1.5195;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:33.10:0,33,410	0/0:5,0:5:15.05:0,15,188	0/1:16,0:8:0.16:0,0,0	0/1:19,0:18:20.49:20,0,44	0/0:22,0:22:54.13:0,54,637	0/0:18,0:18:45.14:0,45,562	0/0:3,0:3:3.01:0,3,38	0/0:41,0:41:96.27:0,96,1150	1/1:3,4:7:15.05:242,15,0	0/0:19,0:19:45.14:0,45,553	0/0:8,0:8:24.08:0,24,300	0/0:10,0:10:15.05:0,15,185	0/0:6,0:6:12.04:0,12,150	0/0:14,0:14:36.11:0,36,447	0/0:10,0:10:24.06:0,24,287	0/0:10,0:10:18.06:0,18,225	0/0:25,0:25:66.17:0,66,787	0/0:19,0:19:39.11:0,39,474	0/0:28,0:28:63.16:0,63,752	0/0:9,0:9:21.05:0,21,250	0/0:10,0:10:15.05:0,15,188	0/0:3,0:3:3.01:0,3,38	0/0:8,0:8:24.08:0,24,300	./.	0/0:18,0:18:45.14:0,45,562	0/0:14,0:14:39.10:0,39,462	0/0:16,0:16:39.12:0,39,488	0/0:21,0:21:51.13:0,51,603
chr10	79121894	.	GAT	G	6139.38	PASS	AB=0.917;AC=33;AF=0.611;AN=54;BaseQRankSum=4.610;DP=348;FS=2.746;HRun=0;HaplotypeScore=60.7892;InbreedingCoeff=0.8155;MQ=72.43;MQ0=2;MQRankSum=0.312;QD=27.91;ReadPosRankSum=-0.093;VQSLOD=5.5220;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:36.12:0,36,606	1/1:0,5:5:15.05:193,15,0	0/0:7,0:2:2.99:0,3,27	0/0:16,0:15:15.89:0,16,226	1/1:2,16:18:45.15:579,45,0	0/0:23,0:23:60.17:0,60,977	0/0:2,0:2:6.02:0,6,101	1/1:7,29:36:87.27:1106,87,0	1/1:2,4:6:12.04:153,12,0	1/1:3,13:15:36.10:449,36,0	1/1:1,11:12:30.05:367,30,0	1/1:0,8:8:24.08:309,24,0	1/1:1,4:5:9.03:116,9,0	1/1:1,8:9:24.08:309,24,0	1/1:2,7:9:15.05:193,15,0	1/1:2,2:4:6.02:77,6,0	0/0:24,0:24:72.18:0,72,1155	1/1:4,14:18:36.12:463,36,0	1/1:8,18:26:36.34:649,36,0	1/1:3,6:9:18.06:232,18,0	1/1:1,7:8:18.06:232,18,0	0/0:1,0:1:3.01:0,3,51	0/0:8,0:8:24.08:0,24,405	./.	0/0:15,0:15:33.11:0,33,557	0/1:4,1:11:17.60:18,0,139	1/1:2,18:20:54.18:694,54,0	0/0:6,0:18:45.01:0,45,421
chr10	79122097	.	A	AATAT	12318.77	PASS	AB=0.955;AC=33;AF=0.589;AN=56;BaseQRankSum=-10.603;DP=433;FS=5.717;HRun=0;HaplotypeScore=75.7407;InbreedingCoeff=0.8945;MQ=62.94;MQ0=0;MQRankSum=-2.998;QD=44.00;ReadPosRankSum=0.646;VQSLOD=4.5038;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:20.09:0,20,387	1/1:0,4:4:9.03:232,9,0	0/0:9,0:9:20.80:0,21,311	0/0:6,0:6:14.42:0,14,149	1/1:1,21:25:48.16:1242,48,0	0/0:22,0:22:51.17:0,51,916	0/0:10,0:10:27.09:0,27,480	1/1:2,26:33:93.26:2027,93,0	1/1:1,9:13:21.07:545,21,0	1/1:2,19:23:54.11:1175,54,0	1/1:0,17:18:27.09:694,27,0	1/1:1,0:11:24.08:426,24,0	1/1:0,0:9:12.04:213,12,0	1/1:0,0:7:12.04:212,12,0	1/1:1,10:13:24.08:623,24,0	1/1:1,8:9:18.06:468,18,0	0/0:24,0:24:66.19:0,66,1123	1/1:1,0:15:24.03:394,24,0	1/1:12,6:18:29.44:708,29,0	1/1:2,14:17:30.10:768,30,0	1/1:0,16:17:33.11:857,33,0	0/0:10,0:10:24.08:0,24,428	0/0:13,0:13:33.11:0,33,593	0/0:3,0:3:9.03:0,9,162	0/0:18,0:18:29.05:0,29,447	0/1:20,1:21:20.80:21,0,827	1/1:1,26:27:66.23:1712,66,0	0/0:19,0:19:54.17:0,54,940
chr10	79122320	.	A	AGTT	23400.76	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-13.631;DP=649;FS=3.067;HRun=0;HaplotypeScore=83.3956;InbreedingCoeff=0.9974;MQ=79.44;MQ0=0;MQRankSum=-7.576;QD=57.35;ReadPosRankSum=1.561;VQSLOD=7.0907;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,2006	1/1:2,5:7:15.05:344,15,0	0/0:19,0:19:51.17:0,51,866	0/0:26,0:26:69.70:0,70,1118	1/1:0,38:38:93.20:2045,93,0	0/0:39,0:39:99:0,117,1992	0/0:18,0:18:51.11:0,51,812	1/1:5,22:28:81.28:1814,81,0	1/1:2,26:28:66.23:1501,66,0	1/1:4,22:27:72.25:1635,72,0	1/1:1,26:27:75.26:1714,75,0	1/1:1,17:19:42.11:909,42,0	1/1:0,23:23:60.19:1377,60,0	1/1:1,11:12:33.11:761,33,0	1/1:3,18:21:45.15:1036,45,0	1/1:0,16:16:48.16:1107,48,0	0/0:23,0:23:69.21:0,69,1144	1/1:2,15:18:42.14:969,42,0	1/1:8,16:24:57.19:1249,57,0	1/1:5,17:22:57.12:1161,57,0	1/1:3,32:35:90.31:2041,90,0	0/0:16,0:16:48.14:0,48,781	0/0:19,0:19:57.20:0,57,972	0/0:26,0:26:75.21:0,75,1223	0/0:15,0:15:45.13:0,45,716	1/1:1,20:23:69.22:1524,69,0	1/1:1,27:30:69.24:1590,69,0	1/1:0,10:10:27.09:622,27,0
chr10	79122500	.	GCTTT	G	1267.90	PASS	AB=0.858;AC=12;AF=0.273;AN=44;BaseQRankSum=-1.483;DP=670;FS=0.673;HRun=0;HaplotypeScore=165.6963;InbreedingCoeff=0.3922;MQ=67.02;MQ0=3;MQRankSum=-0.435;QD=5.22;ReadPosRankSum=-3.991;VQSLOD=1.6369;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:14.97:150,15,0	0/0:6,0:6:5.94:0,6,41	./.	./.	0/0:34,0:34:32.52:0,33,213	0/0:27,2:29:4.97:0,5,890	0/0:25,0:25:27:0,27,334	0/0:36,0:34:2.49:0,2,6	0/0:20,0:20:17.88:0,18,140	0/1:37,0:37:93.43:93,0,127	0/0:26,0:26:10.92:0,11,64	./.	./.	./.	0/0:24,0:24:2.97:0,3,20	0/0:26,0:26:5.93:0,6,39	0/1:23,16:39:99:263,0,116	./.	0/1:26,0:26:9.98:10,0,97	0/0:29,0:29:13.07:0,13,79	0/0:12,0:12:11.95:0,12,94	1/1:16,11:27:32.93:393,33,0	1/1:16,11:28:18.05:257,18,0	0/1:19,12:31:14.97:83,0,15	1/1:26,0:26:15.04:170,15,0	0/0:22,0:22:17.84:0,18,129	0/0:29,0:29:38.67:0,39,274	0/0:14,0:14:3.01:0,3,33
chr10	79122536	.	TCTTTCTTTCTTTCTTTCTTCCTTC	T	9110.97	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=7.561;DP=578;FS=5.103;HRun=0;HaplotypeScore=307.9495;InbreedingCoeff=0.4232;MQ=53.74;MQ0=8;MQRankSum=0.260;QD=24.10;ReadPosRankSum=-2.663;VQSLOD=2.4127;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:3.78:4,0,312	1/1:4,0:4:12.02:165,12,0	0/0:4,0:1:3.01:0,3,32	0/0:5,0:1:2.90:0,3,16	1/1:1,30:31:69.09:899,69,0	0/0:32,0:32:93.28:0,93,6419	0/0:25,0:25:69.06:0,69,2206	1/1:20,0:16:15.76:227,16,0	0/1:16,0:16:76.04:159,0,76	1/1:0,39:39:99:2322,105,0	1/1:1,22:22:26.54:298,27,0	0/1:12,0:12:96.19:96,0,135	0/1:12,0:12:50.89:209,0,51	0/1:12,0:12:70.84:167,0,71	1/1:1,30:31:3.01:57,3,0	1/1:1,20:21:6.02:274,6,0	0/0:37,0:37:75.21:0,75,3697	0/1:17,0:17:87:87,0,188	1/1:6,15:20:44.61:843,45,0	1/1:0,30:30:59.91:870,60,0	1/1:10,0:10:30.05:464,30,0	0/0:20,0:20:57.15:0,57,2429	0/0:24,0:24:48.02:0,48,2340	0/0:28,0:28:45.56:0,46,1535	0/0:25,0:25:27.06:0,27,445	1/1:3,14:17:45:755,45,0	1/1:23,0:23:45.17:1038,45,0	0/1:11,0:10:99:176,0,138
chr10	79122544	.	TCTTTCTTTCTTC	T	3214.20	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=5.428;DP=565;FS=2.445;HRun=0;HaplotypeScore=215.2490;InbreedingCoeff=-0.0102;MQ=53.89;MQ0=8;MQRankSum=-1.341;QD=8.69;ReadPosRankSum=-1.646;VQSLOD=2.6504;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:13.78:492,14,0	0/1:4,0:4:13.08:13,0,53	0/0:3,0:1:2.94:0,3,18	0/1:5,0:2:0.84:1,0,19	0/1:31,0:31:99:104,0,253	0/0:35,0:35:99:0,99,3570	0/0:22,0:22:60.06:0,60,1062	0/1:17,0:13:13.30:75,0,13	0/1:15,0:15:74.80:75,0,302	0/1:39,0:39:99:686,0,148	0/1:23,0:22:4.30:4,0,61	1/1:13,0:13:23.82:189,24,0	1/1:12,0:12:26.67:193,27,0	1/1:14,0:14:23.83:183,24,0	0/0:30,0:30:2.97:0,3,20	1/1:20,0:20:5.99:50,6,0	0/0:35,0:35:66.49:0,66,1397	0/1:19,0:19:11.48:131,0,11	0/1:19,0:18:99:185,0,117	0/1:30,0:30:58.62:197,0,59	0/1:11,0:11:86.34:86,0,158	0/0:19,0:19:47.57:0,48,828	0/0:23,0:23:46.65:0,47,801	0/0:28,0:28:51.02:0,51,681	1/1:1,21:22:15.05:545,15,0	0/1:16,0:16:99:104,0,101	0/1:22,0:22:60.13:60,0,271	0/1:10,0:9:19.04:19,0,164
chr10	79122845	.	G	GA	9046.47	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=11.011;DP=612;FS=2.343;HRun=9;HaplotypeScore=83.6641;InbreedingCoeff=0.9759;MQ=74.99;MQ0=0;MQRankSum=0.292;QD=23.68;ReadPosRankSum=1.674;VQSLOD=5.6341;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,110,932	1/1:1,10:11:30.08:332,30,0	0/0:19,0:17:13.61:0,14,139	0/0:14,1:12:4.68:0,5,99	1/1:1,22:23:63.17:697,63,0	0/0:16,0:16:47.49:0,47,400	0/0:20,0:20:56.94:0,57,486	1/1:9,29:38:88.55:944,89,0	1/1:5,21:26:57.15:631,57,0	1/1:3,21:24:66.13:708,66,0	1/1:1,17:19:51.05:547,51,0	1/1:4,0:23:56.82:284,57,0	1/1:3,0:26:68.30:355,68,0	1/1:2,0:22:48.29:242,48,0	1/1:5,17:22:45.12:498,45,0	1/1:1,12:13:33.09:365,33,0	0/0:27,1:28:44.76:0,45,608	1/1:2,0:13:31.28:157,31,0	1/1:3,9:12:30.06:320,30,0	1/1:1,19:20:54.09:583,54,0	1/1:4,10:15:32.92:346,33,0	0/0:19,0:19:53.98:0,54,465	0/0:23,0:23:62.95:0,63,543	0/0:20,0:20:56.92:0,57,484	0/0:30,0:30:77.90:0,78,666	1/1:4,34:38:99:1076,99,0	1/1:4,26:30:66.18:730,66,0	1/1:0,7:7:21.06:232,21,0
chr10	79125181	.	A	ATT	10854.61	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-6.998;DP=465;FS=1.683;HRun=7;HaplotypeScore=60.0432;InbreedingCoeff=0.9695;MQ=68.00;MQ0=1;MQRankSum=0.896;QD=39.33;ReadPosRankSum=-2.161;VQSLOD=4.0287;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.19:0,69,803	1/1:3,9:13:29.59:452,30,0	0/0:16,0:13:8.10:0,8,254	0/0:6,0:5:5.01:0,5,41	1/1:4,16:20:47.57:690,48,0	0/0:19,0:19:54.16:0,54,629	0/0:8,0:8:21.06:0,21,245	1/1:5,29:34:87.30:1422,87,0	1/1:1,0:14:32.44:114,32,0	1/1:3,23:26:72.25:1166,72,0	1/1:3,18:21:54.18:886,54,0	0/0:10,0:10:27.07:0,27,315	0/0:18,0:18:54.16:0,54,629	0/0:9,0:9:18.05:0,18,210	1/1:2,15:16:39.13:640,39,0	1/1:2,13:15:39.13:640,39,0	0/0:20,0:20:54.16:0,54,629	0/0:10,0:10:30.09:0,30,349	1/1:2,22:24:66.23:1083,66,0	1/1:1,20:21:60.16:955,60,0	1/1:1,10:12:30.10:492,30,0	0/0:10,0:10:24.07:0,24,280	0/0:10,0:10:27.08:0,27,314	0/0:8,0:8:17.97:0,18,181	0/0:17,0:17:39.09:0,39,442	1/1:0,22:22:66.23:1083,66,0	1/1:1,23:24:48.16:788,48,0	1/1:3,9:12:27.09:443,27,0
chr10	79125667	.	AT	A	7780.39	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=10.831;DP=394;FS=7.726;HRun=8;HaplotypeScore=57.6429;InbreedingCoeff=0.9321;MQ=71.65;MQ0=0;MQRankSum=-2.721;QD=24.78;ReadPosRankSum=1.603;VQSLOD=5.6108;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:45.07:435,45,0	1/1:0,2:2:6.01:58,6,0	0/0:4,0:4:6.02:0,6,69	0/0:9,0:8:3.71:0,4,38	1/1:1,27:28:75.11:724,75,0	0/0:13,0:13:39.12:0,39,471	0/0:6,0:6:18.06:0,18,217	1/1:6,17:23:51.08:493,51,0	1/1:0,9:9:21.03:203,21,0	1/1:2,16:18:48.04:451,48,0	1/1:2,21:23:57.08:550,57,0	1/1:1,13:14:33.05:319,33,0	1/1:1,17:18:45.07:435,45,0	1/1:0,14:14:42.07:406,42,0	1/1:1,12:13:30.04:290,30,0	1/1:0,8:8:24.04:232,24,0	0/0:19,0:19:54.14:0,54,629	1/1:0,12:12:36.06:348,36,0	1/1:2,13:15:39.06:377,39,0	1/1:0,23:23:60.09:579,60,0	1/1:0,6:6:18.03:174,18,0	0/0:8,0:8:21.06:0,21,254	0/0:14,0:14:39.11:0,39,459	0/0:7,0:7:21.06:0,21,254	1/1:1,9:10:21.03:203,21,0	1/1:1,23:24:69.11:666,69,0	1/1:2,22:24:53.91:521,54,0	1/1:1,11:12:33.05:319,33,0
chr10	79125972	.	TTAA	T	1068.53	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.376;DP=657;FS=0.728;HRun=0;HaplotypeScore=89.6507;InbreedingCoeff=0.9977;MQ=82.68;MQ0=0;MQRankSum=-2.246;QD=38.16;ReadPosRankSum=1.050;VQSLOD=4.4000;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.29:0,84,1983	0/0:13,0:13:39.08:0,39,710	0/0:20,0:20:40.49:0,40,1016	0/0:21,0:21:38.81:0,39,992	0/0:28,0:28:84.07:0,84,1853	0/0:35,0:35:99:0,102,2053	0/0:21,0:21:63.18:0,63,1346	0/0:29,0:29:87.26:0,87,1775	1/1:0,28:28:66.23:1163,66,0	0/0:20,0:20:60.18:0,60,1211	0/0:24,0:24:69.21:0,69,1474	0/0:34,0:34:99:0,99,2181	0/0:28,0:28:84.25:0,84,1807	0/0:25,0:25:69.21:0,69,1538	0/0:28,0:28:84.26:0,84,1865	0/0:24,0:24:72.21:0,72,1545	0/0:18,0:18:54.19:0,54,1257	0/0:10,0:10:24.08:0,24,561	0/0:22,0:22:66.22:0,66,1490	0/0:31,0:31:93.25:0,93,1931	0/0:30,0:30:90.30:0,90,2053	0/0:17,0:17:48.16:0,48,1111	0/0:19,0:19:57.17:0,57,1190	0/0:17,0:17:51.16:0,51,1159	0/0:25,0:25:75.22:0,75,1633	0/0:28,0:28:84.27:0,84,1855	0/0:21,0:21:63.22:0,63,1459	0/0:12,0:12:36.12:0,36,851
chr10	79126463	.	T	TTTA	3050.01	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-8.809;DP=631;FS=14.674;HRun=0;HaplotypeScore=93.1723;InbreedingCoeff=0.9979;MQ=81.89;MQ0=0;MQRankSum=-4.311;QD=43.57;ReadPosRankSum=3.680;VQSLOD=4.4148;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.18:0,54,867	0/0:12,0:12:36.12:0,36,588	0/0:24,0:24:60.15:0,60,867	0/0:12,0:12:24.55:0,25,385	0/0:29,0:29:81.28:0,81,1301	0/0:33,0:32:93.30:0,93,1494	0/0:17,0:17:51.17:0,51,833	0/0:25,0:25:57.19:0,57,897	0/0:35,0:35:99:0,99,1617	0/0:37,0:37:99:0,105,1704	0/0:19,0:19:51.17:0,51,822	1/1:3,17:22:36.12:803,36,0	1/1:3,17:21:48.16:1068,48,0	1/1:2,10:12:27.09:603,27,0	0/0:30,0:30:90.29:0,90,1435	0/0:22,0:22:51.17:0,51,833	0/0:15,0:15:45.15:0,45,735	1/1:2,13:15:33.11:736,33,0	0/0:23,0:23:69.16:0,69,1037	0/0:33,0:33:93.32:0,93,1496	0/0:17,0:17:48.15:0,48,758	0/0:22,0:22:66.22:0,66,1056	0/0:21,0:21:54.18:0,54,871	0/0:15,0:15:42.14:0,42,686	0/0:23,0:23:69.23:0,69,1094	0/0:34,0:34:99:0,99,1584	0/0:38,0:36:99:0,111,1763	0/0:7,0:7:21.05:0,21,318
chr10	79126525	.	TA	T	1034.60	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.802;DP=637;FS=3.339;HRun=2;HaplotypeScore=64.7409;InbreedingCoeff=0.9668;MQ=84.68;MQ0=0;MQRankSum=-1.974;QD=33.37;ReadPosRankSum=2.016;VQSLOD=3.8634;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.14:0,51,721	0/0:5,0:5:15.05:0,15,224	0/0:22,0:22:48.16:0,48,739	0/0:18,0:18:29.50:0,29,492	0/0:26,0:26:78.26:0,78,1167	0/0:34,0:34:99:0,99,1411	0/0:12,0:12:36.11:0,36,518	0/0:39,0:39:99:0,111,1611	1/1:0,31:31:87.28:1129,87,0	0/0:34,0:34:99:0,102,1510	0/0:25,0:25:75.18:0,75,1076	0/0:24,0:24:63.21:0,63,935	0/0:25,0:25:60.15:0,60,853	0/0:16,0:16:42.14:0,42,627	0/0:31,0:31:93.30:0,93,1356	0/0:25,0:25:75.24:0,75,1096	0/0:14,0:14:41.93:0,42,596	0/0:8,0:8:24.08:0,24,358	0/0:33,0:33:87.27:0,87,1262	0/0:31,0:31:90.28:0,90,1305	0/0:21,0:21:63.20:0,63,923	0/0:21,0:21:60.20:0,60,886	0/0:26,0:26:78.25:0,78,1148	0/0:16,0:16:48.16:0,48,716	0/0:23,0:23:69.22:0,69,1015	0/0:24,0:24:72.24:0,72,1071	0/0:31,0:31:90.30:0,90,1343	0/0:5,0:5:15.05:0,15,225
chr10	79126634	.	T	TATACCCTTA	6174.38	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.393;DP=644;FS=2.790;HRun=0;HaplotypeScore=164.8761;InbreedingCoeff=0.9992;MQ=78.67;MQ0=0;MQRankSum=-10.415;QD=96.47;ReadPosRankSum=2.789;VQSLOD=5.3595;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.27:0,78,2394	0/0:10,0:10:30.08:0,30,903	0/0:17,0:17:45.12:0,45,1074	0/0:15,0:15:42.14:0,42,1201	0/0:29,0:29:84.26:0,84,2480	0/0:32,0:32:96.31:0,96,2812	0/0:22,0:22:66.21:0,66,1879	0/0:33,0:33:96.29:0,96,2611	0/0:17,0:17:51.18:0,51,1663	0/0:33,0:33:96.32:0,96,2800	0/0:27,0:27:81.26:0,81,2362	1/1:0,9:13:27.09:1336,27,0	1/1:0,13:19:39.13:1924,39,0	1/1:1,11:18:33.09:1585,33,0	0/0:25,0:25:75.26:0,75,2393	0/0:29,0:29:87.26:0,87,2617	0/0:24,0:24:69.18:0,69,1946	1/1:0,8:14:27.09:1330,27,0	0/0:20,0:20:60.17:0,60,1641	0/0:34,0:34:99:0,102,3140	0/0:16,0:16:48.15:0,48,1419	0/0:29,0:29:87.29:0,87,2685	0/0:26,0:26:75.26:0,75,2359	0/0:15,0:15:45.15:0,45,1412	0/0:23,0:23:69.24:0,69,2143	0/0:24,0:24:72.25:0,72,2290	0/0:40,0:38:99:0,120,3692	0/0:14,0:14:42.14:0,42,1242
chr10	79126849	.	C	CATTT	26581.45	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-12.546;DP=641;FS=4.071;HRun=0;HaplotypeScore=101.1397;InbreedingCoeff=0.9996;MQ=89.98;MQ0=0;MQRankSum=-12.367;QD=64.05;ReadPosRankSum=3.758;VQSLOD=6.9418;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:45.11:0,45,823	1/1:3,13:16:42.01:982,42,0	0/0:29,0:29:82.85:0,83,1395	0/0:26,0:26:60.01:0,60,998	1/1:4,18:24:54.15:1337,54,0	0/0:15,0:15:42.13:0,42,802	0/0:32,0:32:93.32:0,93,1856	1/1:0,21:24:65.75:1502,66,0	1/1:1,18:21:51.13:1362,51,0	1/1:2,21:24:69.17:1726,69,0	1/1:1,17:18:50.87:1131,51,0	1/1:2,22:25:60.04:1612,60,0	1/1:1,26:31:69.19:1839,69,0	1/1:1,20:24:57.15:1527,57,0	1/1:3,20:23:60.09:1484,60,0	1/1:4,33:37:90.24:2389,90,0	0/0:25,0:25:75.24:0,75,1445	1/1:1,12:14:33.11:922,33,0	1/1:5,18:27:81.21:1933,81,0	1/1:4,18:23:62.95:1405,63,0	1/1:4,17:22:48.08:1186,48,0	0/0:21,0:21:60.21:0,60,1195	0/0:21,0:21:63.20:0,63,1221	0/0:17,0:17:51.18:0,51,1017	0/0:25,0:25:75.23:0,75,1428	1/1:1,14:15:42.14:1151,42,0	1/1:4,33:39:90:2447,90,0	1/1:0,8:8:24.08:647,24,0
chr10	79127652	.	T	TGA	3552.63	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=14.521;DP=701;FS=1.393;HRun=0;HaplotypeScore=97.4050;InbreedingCoeff=0.9989;MQ=78.68;MQ0=0;MQRankSum=-5.816;QD=39.04;ReadPosRankSum=2.760;VQSLOD=5.6383;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.24:0,78,1241	0/0:8,0:8:24.08:0,24,385	0/0:17,0:17:51.15:0,51,765	0/0:16,0:16:48.16:0,48,748	0/0:35,0:35:99:0,105,1712	0/0:27,0:27:78.27:0,78,1272	0/0:20,0:20:57.19:0,57,926	0/0:32,0:32:96.33:0,96,1565	0/0:20,0:20:60.19:0,60,954	0/0:33,0:33:93.32:0,93,1513	0/0:32,0:32:96.33:0,96,1555	1/1:3,13:16:47.99:693,48,0	1/1:4,28:32:76.76:1243,77,0	1/1:8,23:31:25.04:1081,25,0	0/0:43,0:43:99:0,126,2021	0/0:35,0:35:99:0,105,1661	0/0:17,0:17:51.17:0,51,824	1/1:3,9:12:36.07:535,36,0	0/0:20,0:20:60.20:0,60,976	0/0:42,0:42:99:0,120,1932	0/0:27,0:27:78.23:0,78,1235	0/0:19,0:19:57.17:0,57,881	0/0:24,0:24:69.22:0,69,1097	0/0:24,0:24:72.20:0,72,1145	0/0:21,0:21:63.22:0,63,1021	0/0:29,0:29:87.29:0,87,1394	0/0:26,0:26:78.27:0,78,1261	0/0:17,0:17:48.16:0,48,779
chr10	79127654	.	T	TAC	3804.91	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=14.811;DP=696;FS=2.442;HRun=0;HaplotypeScore=97.1304;InbreedingCoeff=0.9996;MQ=78.82;MQ0=0;MQRankSum=-6.801;QD=40.91;ReadPosRankSum=1.711;VQSLOD=5.5089;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.25:0,78,1241	0/0:9,0:9:27.08:0,27,417	0/0:16,0:16:38.11:0,38,568	0/0:17,0:17:45.14:0,45,706	0/0:35,0:35:99:0,105,1685	0/0:28,0:28:83.92:0,84,1280	0/0:20,0:20:60.20:0,60,957	0/0:33,0:33:96.31:0,96,1523	0/0:20,0:20:60.19:0,60,954	0/0:32,0:32:90.31:0,90,1469	0/0:32,0:32:93.32:0,93,1515	1/1:4,13:17:47.75:694,48,0	1/1:5,28:33:90.30:1272,90,0	1/1:8,23:31:93.30:1348,93,0	0/0:41,0:41:99:0,120,1947	0/0:34,0:34:99:0,99,1611	0/0:17,0:17:48.12:0,48,731	1/1:3,9:12:35.87:492,36,0	0/0:20,0:20:60.20:0,60,955	0/0:43,0:43:99:0,129,1953	0/0:25,0:25:72.25:0,72,1174	0/0:18,0:18:54.18:0,54,878	0/0:24,0:24:72.22:0,72,1127	0/0:23,0:23:69.23:0,69,1102	0/0:19,0:19:57.18:0,57,907	0/0:29,0:29:87.25:0,87,1389	0/0:25,0:25:75.26:0,75,1222	0/0:17,0:17:48.16:0,48,783
chr10	79127947	.	G	GT	279.99	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-0.031;DP=478;FS=0.000;HRun=10;HaplotypeScore=68.9301;InbreedingCoeff=0.5517;MQ=73.67;MQ0=0;MQRankSum=-0.096;QD=14.74;ReadPosRankSum=-0.775;VQSLOD=3.6176;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:26.88:0,27,216	0/0:3,0:3:5.99:0,6,49	0/1:7,0:6:10.59:11,0,63	0/0:13,0:12:15.84:0,16,143	0/0:30,0:30:62.82:0,63,510	0/0:25,0:25:62.05:0,62,515	0/0:20,0:20:50.86:0,51,409	0/0:23,0:23:44.92:0,45,368	1/1:0,12:12:36.05:372,36,0	0/0:17,0:18:37.95:0,38,298	0/0:27,0:28:67.60:0,68,533	0/0:18,0:18:52.98:0,53,425	0/0:14,0:14:38.95:0,39,320	0/0:16,0:16:41.89:0,42,337	0/0:13,0:13:23.96:0,24,197	0/0:25,0:25:22.95:0,23,484	0/0:9,0:9:23.97:0,24,197	0/0:14,0:14:32.89:0,33,271	0/0:15,0:15:44.90:0,45,361	0/0:26,0:26:59.90:0,60,490	0/0:13,1:14:3.95:0,4,239	0/0:12,0:12:32.96:0,33,271	0/0:12,0:12:32.96:0,33,271	0/0:14,0:14:29.92:0,30,240	0/0:19,0:21:54.95:0,55,422	0/0:21,0:21:55.95:0,56,446	0/0:28,0:28:71.87:0,72,585	0/0:11,0:11:32.96:0,33,271
chr10	79128845	.	G	GAA	1181.50	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.191;DP=639;FS=3.241;HRun=9;HaplotypeScore=73.3624;InbreedingCoeff=0.9825;MQ=59.11;MQ0=3;MQRankSum=0.722;QD=26.85;ReadPosRankSum=0.382;VQSLOD=3.6842;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,108,1130	0/0:11,0:11:30.01:0,30,301	0/0:9,0:8:24.05:0,24,249	0/0:12,0:7:12.03:0,12,125	0/0:39,0:39:99:0,102,1068	0/0:26,0:25:63.08:0,63,655	0/0:16,0:16:36.07:0,36,383	0/0:22,0:22:51.07:0,51,536	0/0:11,0:12:35.83:0,36,363	0/0:25,0:26:60.09:0,60,688	0/0:28,0:29:72.10:0,72,805	0/0:20,0:20:54.13:0,54,574	0/0:17,0:17:45.07:0,45,463	0/0:17,0:17:42.10:0,42,447	0/0:20,0:20:35.80:0,36,582	0/0:17,0:17:37.83:0,38,413	0/0:32,0:32:90.15:0,90,928	0/0:16,0:16:36.07:0,36,382	0/0:24,0:22:57.11:0,57,605	0/0:34,0:34:84.11:0,84,941	0/0:13,0:13:36.06:0,36,371	0/0:27,0:28:68.89:0,69,707	0/0:33,0:34:77.88:0,78,800	0/0:26,0:26:66.16:0,66,702	0/0:16,0:16:36.04:0,36,383	1/1:5,16:22:51.12:740,51,0	0/0:33,0:33:95.64:0,96,961	1/1:1,17:21:38.62:563,39,0
chr10	79131986	.	G	GTT	5356.49	PASS	AB=0.950;AC=23;AF=0.411;AN=56;BaseQRankSum=-9.269;DP=436;FS=1.895;HRun=10;HaplotypeScore=58.6400;InbreedingCoeff=0.8922;MQ=72.02;MQ0=1;MQRankSum=-0.387;QD=27.05;ReadPosRankSum=-3.270;VQSLOD=4.0639;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:81.04:0,81,791	1/1:1,2:3:9.03:124,9,0	0/0:10,0:10:16.47:0,16,136	0/0:10,0:10:24.01:0,24,227	1/1:4,20:23:45.08:623,45,0	0/0:16,0:16:45.10:0,45,458	0/0:10,0:10:24.03:0,24,244	1/1:4,23:29:71.70:982,72,0	0/0:18,0:18:45.06:0,45,451	1/1:1,9:11:30.09:413,30,0	1/1:0,7:9:26.53:335,27,0	0/0:3,0:21:43.89:0,44,190	0/0:4,0:12:21.94:0,22,95	0/0:0,0:14:35.68:0,36,154	1/1:3,11:14:5.61:462,6,0	1/1:2,8:11:23.57:322,24,0	0/0:24,0:24:63.14:0,63,641	0/0:2,0:7:8.06:0,8,34	1/1:5,13:20:45.56:621,46,0	1/1:2,11:14:33.07:460,33,0	1/1:2,9:11:21.07:313,21,0	0/0:9,0:9:27.06:0,27,275	0/0:10,0:10:27.06:0,27,274	0/0:6,0:6:12.01:0,12,122	0/0:13,0:13:36.07:0,36,360	0/1:18,1:19:8.63:9,0,300	1/1:9,24:33:50.48:693,50,0	0/0:25,0:25:57.10:0,57,580
chr10	79132195	.	C	CTTAT	2709.58	PASS	AC=42;AF=0.840;AN=50;BaseQRankSum=3.470;DP=294;FS=18.417;HRun=0;HaplotypeScore=57.2707;InbreedingCoeff=0.4594;MQ=60.66;MQ0=2;MQRankSum=-3.767;QD=11.01;ReadPosRankSum=-3.976;VQSLOD=0.0425;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:9.03:158,9,0	1/1:4,0:4:3.01:69,3,0	1/1:7,0:6:1.55:4,2,0	./.	1/1:6,0:6:2.98:21,3,0	0/0:17,0:17:33.11:0,33,522	0/0:2,0:2:6.02:0,6,95	1/1:42,0:39:30.10:521,30,0	1/1:4,4:8:12.04:286,12,0	1/1:6,0:8:6.02:93,6,0	1/1:9,0:10:6.02:103,6,0	1/1:0,0:2:6.02:105,6,0	1/1:1,0:2:3.01:52,3,0	1/1:2,0:4:3.01:52,3,0	1/1:9,0:9:3.01:47,3,0	1/1:7,0:7:3.01:43,3,0	0/0:17,0:17:30.09:0,30,452	1/1:2,7:9:15.05:358,15,0	1/1:20,0:20:12.04:187,12,0	1/1:7,0:8:3.01:52,3,0	1/1:15,0:15:3.48:52,3,0	0/0:1,0:1:3.01:0,3,48	./.	./.	1/1:12,0:16:9.03:157,9,0	1/1:10,0:11:6.02:105,6,0	1/1:13,0:13:3.01:43,3,0	1/1:24,0:30:18.06:341,18,0
chr10	79132360	.	GTC	G	448.30	PASS	AB=0.914;AC=20;AF=0.417;AN=48;BaseQRankSum=3.006;DP=543;FS=28.342;HRun=0;HaplotypeScore=96.3852;InbreedingCoeff=0.2913;MQ=67.63;MQ0=34;MQRankSum=0.869;QD=1.70;ReadPosRankSum=2.190;VQSLOD=0.0910;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:30:33.51:254,34,0	./.	0/1:87,0:36:0:0,0,0	0/0:96,0:37:0.47:0,0,1	./.	0/1:20,0:19:14.63:15,0,120	0/1:18,0:18:49.89:68,0,50	0/0:27,0:27:8.08:0,8,47	1/1:9,0:9:2.87:21,3,0	0/0:15,0:16:5.98:0,6,47	0/1:12,0:11:0:0,0,0	./.	1/1:7,0:7:11.17:69,11,0	0/0:8,0:7:2.74:0,3,12	1/1:8,0:8:0.47:1,0,0	0/0:10,0:10:3:0,3,25	0/1:19,7:25:15.29:15,0,132	1/1:7,0:9:8.66:50,9,0	0/0:20,0:18:8.86:0,9,64	0/0:6,0:6:2.94:0,3,18	./.	0/1:9,7:16:17.64:18,0,84	1/1:9,0:8:8.92:65,9,0	0/0:14,0:14:2.49:0,2,285	1/1:11,0:11:2.88:15,3,0	0/0:13,0:15:18.82:0,19,156	0/0:11,0:12:4.19:0,4,69	0/0:16,0:15:14.01:0,14,101
chr10	79132389	.	T	TCACACACACACA	321.67	PASS	AB=1.000;AC=9;AF=0.173;AN=52;BaseQRankSum=4.623;DP=412;FS=2.510;HRun=0;HaplotypeScore=133.3951;InbreedingCoeff=0.1691;MQ=43.33;MQ0=33;MQRankSum=-4.912;QD=4.95;ReadPosRankSum=-0.927;VQSLOD=2.6027;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:32:53.68:0,54,1473	./.	0/0:28,0:6:12.51:0,13,381	0/0:47,0:7:11.95:0,12,217	0/0:8,0:8:6.02:0,6,187	0/0:27,0:26:51.24:0,51,1782	0/0:16,0:16:42.14:0,42,1401	0/0:18,0:16:33.74:0,34,1010	0/1:8,0:8:59.33:59,0,194	0/1:10,0:10:21.26:21,0,389	0/0:4,0:3:0:0,0,0	1/1:10,4:13:5.84:124,6,0	0/1:10,0:10:69.57:70,0,87	1/1:7,0:6:2.55:110,3,0	0/0:5,0:4:3:0,3,25	0/0:17,0:16:13.29:0,13,300	0/0:23,0:20:27.56:0,28,1018	0/1:5,0:5:41.14:41,0,108	0/0:14,0:13:16.92:0,17,569	0/0:2,0:2:3.01:0,3,115	./.	0/0:14,0:14:27.56:0,28,886	0/0:11,0:10:27.09:0,27,930	0/0:25,0:23:63.02:0,63,2148	0/0:12,0:12:19.30:0,19,451	0/0:13,0:12:34.66:0,35,792	0/1:11,0:10:28.17:28,0,197	0/0:14,0:12:21.24:0,21,546
chr10	79132397	.	TCTCTCTCACA	T	705.14	PASS	AB=1.000;AC=10;AF=0.192;AN=52;BaseQRankSum=2.320;DP=360;FS=20.962;HRun=0;HaplotypeScore=105.1456;InbreedingCoeff=0.2511;MQ=45.12;MQ0=30;MQRankSum=3.086;QD=8.30;ReadPosRankSum=-1.144;VQSLOD=0.6368;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:32:28.14:630,28,0	./.	0/0:21,0:7:15.02:0,15,210	0/0:32,0:9:18.32:0,18,268	0/0:7,0:7:2.99:0,3,24	0/0:27,0:25:61.13:0,61,1696	0/1:15,0:15:14:14,0,658	0/0:17,0:14:37.16:0,37,512	0/1:8,0:8:14.28:14,0,89	0/0:5,0:5:15.05:0,15,337	1/1:3,0:2:0.47:1,0,0	0/0:14,0:13:6.02:0,6,91	0/1:11,0:11:32.45:32,0,139	0/0:6,0:5:3.01:0,3,57	0/0:4,0:3:3.01:0,3,61	0/0:15,0:14:8.77:0,9,189	0/0:25,0:22:42.14:0,42,1081	0/1:4,0:4:28.81:71,0,29	0/0:9,0:8:14.88:0,15,315	0/0:2,0:2:3.01:0,3,58	./.	0/0:12,0:12:18.53:0,19,517	0/0:11,0:10:24.06:0,24,381	0/0:29,0:27:65.22:0,65,2252	1/1:4,5:9:6.54:77,7,0	0/0:10,0:9:27.07:0,27,719	0/0:11,0:9:6.88:0,7,258	0/0:11,0:9:18.05:0,18,460
chr10	79132403	.	T	TCACACACACACACA	4158.39	PASS	AB=1.000;AC=29;AF=0.558;AN=52;BaseQRankSum=3.597;DP=405;FS=0.000;HRun=0;HaplotypeScore=152.6797;InbreedingCoeff=0.7466;MQ=48.42;MQ0=22;MQRankSum=-6.613;QD=24.18;ReadPosRankSum=-1.445;VQSLOD=2.4764;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:35:29.49:0,29,730	1/1:2,0:2:3.01:126,3,0	0/0:23,0:9:17.89:0,18,307	0/0:21,0:7:18.94:0,19,618	./.	0/0:26,0:24:50.32:0,50,1725	0/0:15,0:15:26.69:0,27,792	1/1:20,0:17:24.03:636,24,0	1/1:10,0:10:3.01:113,3,0	1/1:7,0:7:18.06:483,18,0	0/1:5,0:4:0:0,0,0	1/1:18,0:17:11.50:282,12,0	1/1:14,0:14:18.96:388,19,0	1/1:10,0:9:9.50:291,10,0	1/1:12,0:11:3.47:97,3,0	1/1:6,5:15:3.01:128,3,0	0/0:26,0:23:26.72:0,27,969	1/1:7,0:7:11.47:122,11,0	1/1:12,1:11:12.04:487,12,0	./.	0/0:11,0:14:0.94:0,1,2	0/0:11,0:11:3.48:0,3,111	0/0:10,0:9:9.03:0,9,335	0/0:30,0:28:63.20:0,63,2191	0/0:8,0:8:9.03:0,9,329	1/1:15,0:14:30.09:589,30,0	1/1:12,0:10:6.02:179,6,0	1/1:6,0:10:6.02:238,6,0
chr10	79132789	.	T	TTC	10139.17	PASS	AC=34;AF=0.630;AN=54;BaseQRankSum=0.154;DP=689;FS=5.460;HRun=0;HaplotypeScore=105.6348;InbreedingCoeff=0.9871;MQ=65.01;MQ0=39;MQRankSum=-2.037;QD=30.00;ReadPosRankSum=2.236;VQSLOD=6.8624;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:87.20:0,87,1262	1/1:4,0:4:9.03:151,9,0	0/0:64,0:26:53.71:0,54,792	0/0:85,0:41:57.88:0,58,1076	1/1:21,0:20:40.37:617,40,0	0/0:20,0:19:36.12:0,36,549	0/0:20,0:19:48.16:0,48,737	1/1:31,0:30:37.54:848,38,0	1/1:18,0:17:47.59:616,48,0	1/1:29,0:29:45.18:819,45,0	1/1:14,0:14:30.10:487,30,0	1/1:20,0:19:36.05:550,36,0	1/1:15,0:14:26.86:434,27,0	1/1:11,0:9:15.01:202,15,0	1/1:27,0:26:66:935,66,0	1/1:30,0:29:77.37:1257,77,0	0/0:20,0:20:51.17:0,51,757	1/1:12,0:10:19.33:345,19,0	1/1:31,0:30:42.96:838,43,0	1/1:18,0:17:30:433,30,0	./.	0/0:14,0:14:27.09:0,27,413	0/0:21,0:20:51.13:0,51,749	0/0:25,0:24:48.13:0,48,671	0/0:20,0:17:45.15:0,45,683	1/1:30,0:27:45.76:746,46,0	1/1:14,0:14:29.67:478,30,0	1/1:13,0:11:26.82:380,27,0
chr10	79134542	.	A	AGGG	4976.25	PASS	AB=0.556;AC=39;AF=0.696;AN=56;BaseQRankSum=5.472;DP=526;FS=0.000;HRun=8;HaplotypeScore=101.8948;InbreedingCoeff=0.8557;MQ=82.68;MQ0=1;MQRankSum=-1.355;QD=14.34;ReadPosRankSum=-0.986;VQSLOD=1.5051;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,10:21:15.50:244,16,0	1/1:3,4:8:9:122,9,0	0/0:21,0:21:35.66:0,36,397	0/0:17,0:17:33.02:0,33,395	1/1:7,9:17:9.03:177,9,0	0/0:27,0:27:66.16:0,66,851	0/0:25,0:25:69.19:0,69,892	1/1:9,3:13:14.99:214,15,0	0/1:5,0:25:21.52:22,0,49	1/1:12,10:26:30.06:474,30,0	1/1:6,7:14:20.98:349,21,0	1/1:3,0:18:17.44:38,17,0	1/1:1,0:18:19.94:43,20,0	1/1:4,0:29:27.94:61,28,0	1/1:4,12:17:32.89:628,33,0	1/1:5,10:18:34.19:571,34,0	0/0:31,0:31:78.21:0,78,1025	1/1:6,0:19:35.34:255,35,0	1/1:7,6:15:27.02:417,27,0	1/1:2,6:9:21.05:293,21,0	1/1:10,10:26:17.19:250,17,0	0/0:24,0:24:66.19:0,66,852	0/0:17,0:17:51.17:0,51,670	0/0:17,0:17:45.13:0,45,590	1/1:1,7:8:9.03:182,9,0	1/1:2,0:16:19.68:83,20,0	1/1:10,12:25:29.95:551,30,0	1/1:0,0:3:2.49:5,2,0
chr10	79135135	.	CCAAACAAA	C	11309.58	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=11.057;DP=530;FS=10.040;HRun=0;HaplotypeScore=156.1948;InbreedingCoeff=0.8528;MQ=48.25;MQ0=7;MQRankSum=-8.481;QD=32.97;ReadPosRankSum=-0.034;VQSLOD=3.9957;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:23.41:113,0,23	1/1:11,0:11:21.07:424,21,0	0/0:24,0:13:15.05:0,15,281	0/0:22,0:10:15.03:0,15,226	1/1:19,10:29:39.13:765,39,0	0/0:18,0:18:48.16:0,48,1909	0/0:21,0:21:39.01:0,39,1085	1/1:21,0:19:23.97:317,24,0	1/1:3,5:8:9.03:233,9,0	1/1:16,0:16:36.12:798,36,0	1/1:13,0:17:27.06:516,27,0	1/1:4,0:4:9.03:209,9,0	1/1:20,0:20:48.16:933,48,0	1/1:16,0:16:36.06:749,36,0	1/1:16,0:16:42.13:848,42,0	1/1:14,0:13:36.12:852,36,0	0/0:31,0:30:69.19:0,69,2015	1/1:19,0:19:31.92:550,32,0	1/1:16,0:15:27.06:503,27,0	1/1:16,0:21:42.02:761,42,0	1/1:10,0:10:8.50:108,9,0	0/0:13,0:13:21.06:0,21,722	0/0:28,0:28:69.22:0,69,2463	0/0:30,0:30:67.47:0,67,2296	1/1:17,0:17:2.70:24,3,0	1/1:21,0:21:45.11:824,45,0	1/1:30,0:30:63.15:1252,63,0	1/1:16,0:16:24.05:531,24,0
chr10	79135136	.	CA	C	603.10	PASS	AB=0.722;AC=18;AF=0.321;AN=56;BaseQRankSum=13.484;DP=524;FS=2.338;HRun=3;HaplotypeScore=123.1834;InbreedingCoeff=-0.3342;MQ=49.18;MQ0=7;MQRankSum=-6.183;QD=2.09;ReadPosRankSum=8.866;VQSLOD=-0.7174;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:10,11:21:29.66:114,0,30	0/1:9,3:12:35.83:36,0,65	0/0:26,0:15:41.56:0,42,497	0/0:21,0:9:21:0,21,260	0/1:17,11:28:23.24:23,0,229	0/0:18,0:18:54.17:0,54,757	0/0:20,0:20:48.63:0,49,681	0/0:22,0:20:3.16:0,3,207	0/0:8,0:8:8.89:0,9,126	0/1:7,8:15:50.14:62,0,50	0/1:11,6:17:16.36:16,0,133	0/1:1,3:4:13.82:14,0,23	0/1:11,9:20:58.06:58,0,118	0/1:6,9:16:25.88:26,0,123	0/1:9,7:16:29.19:29,0,104	1/1:4,9:13:8.04:87,8,0	0/0:30,0:29:81.15:0,81,1109	0/0:15,4:19:4.72:0,5,250	0/1:11,3:13:12.02:12,0,150	0/1:12,9:21:24.17:24,0,143	0/1:8,1:9:2.55:3,0,28	0/0:13,0:13:36.12:0,36,513	0/0:28,0:28:81.27:0,81,1159	0/0:30,0:30:81.25:0,81,1124	0/1:8,9:17:27.27:148,0,27	0/1:17,4:21:26.17:26,0,202	0/1:20,9:29:47.20:47,0,245	0/1:10,6:16:36.89:37,0,130
chr10	79135140	.	CAAACAAA	C	7382.90	PASS	AB=0.816;AC=25;AF=0.446;AN=56;BaseQRankSum=14.431;DP=525;FS=9.841;HRun=0;HaplotypeScore=158.3853;InbreedingCoeff=0.1140;MQ=48.96;MQ0=8;MQRankSum=-10.341;QD=24.53;ReadPosRankSum=3.920;VQSLOD=3.7722;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:24:13.12:0,13,304	0/1:9,3:12:1.62:285,0,2	0/0:28,0:13:7.42:0,7,698	0/0:20,0:8:20.66:0,21,466	0/1:16,11:27:39.39:463,0,39	0/0:17,0:17:51.17:0,51,2017	0/0:17,0:17:45.52:0,46,1427	0/1:24,0:22:34.63:272,0,35	0/1:8,0:8:84.51:99,0,85	1/1:6,8:14:6.95:554,7,0	0/1:11,6:17:19.87:313,0,20	1/1:2,3:5:1.12:145,1,0	1/1:10,10:20:32.75:678,33,0	1/1:8,9:17:2.53:492,3,0	1/1:9,7:16:26.81:594,27,0	1/1:4,9:13:28.28:601,28,0	0/0:30,0:29:81.73:0,82,2567	0/1:16,4:20:94.37:337,0,94	0/1:11,3:14:15.07:328,0,15	0/1:13,9:22:14.66:459,0,15	0/1:8,1:9:23.86:49,0,24	0/0:14,0:14:39.13:0,39,1114	0/0:29,0:29:84.29:0,84,2927	0/0:29,0:29:84.29:0,84,2787	0/0:6,0:16:45.95:0,46,278	1/1:17,4:21:0.13:541,0,0	0/1:18,9:27:29.15:825,0,29	0/1:9,6:15:43.14:348,0,43
chr10	79135802	.	AAAAACAAAAC	A	6220.06	PASS	AB=0.984;AC=23;AF=0.411;AN=56;BaseQRankSum=6.732;DP=600;FS=7.069;HRun=0;HaplotypeScore=204.5438;InbreedingCoeff=0.7549;MQ=63.02;MQ0=2;MQRankSum=-7.601;QD=25.28;ReadPosRankSum=-0.257;VQSLOD=3.6367;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:51.17:0,51,2304	1/1:16,0:16:27.05:519,27,0	0/0:17,0:12:12.02:0,12,364	0/0:19,0:10:3.47:0,3,27	1/1:28,1:29:59.75:909,60,0	0/0:25,0:24:63.20:0,63,2599	0/0:27,0:27:63.21:0,63,2740	1/1:15,0:15:18.06:333,18,0	0/0:25,0:25:53.85:0,54,1609	1/1:21,2:22:48.03:755,48,0	1/1:20,0:20:33.02:496,33,0	0/0:19,0:19:41.92:0,42,942	0/0:17,0:16:33.10:0,33,923	0/0:26,0:26:50.98:0,51,1415	1/1:18,0:18:17.87:286,18,0	0/1:19,1:20:46.49:816,0,46	0/0:30,0:30:63.66:0,64,2354	0/0:24,0:24:41.29:0,41,936	1/1:16,0:16:26.93:324,27,0	1/1:29,1:30:66.07:1076,66,0	1/1:12,0:12:9.03:187,9,0	0/0:29,0:29:75.10:0,75,2861	0/0:21,0:21:48.12:0,48,1630	0/0:22,0:21:54.15:0,54,2427	0/0:30,0:30:75.24:0,75,3136	0/1:21,0:21:25.72:26,0,131	1/1:22,0:21:26.88:482,27,0	0/1:4,0:4:9.43:9,0,10
chr10	79135813	.	AAAACAAAAC	A	10075.84	PASS	AB=0.947;AC=25;AF=0.446;AN=56;BaseQRankSum=4.271;DP=596;FS=0.720;HRun=0;HaplotypeScore=183.2027;InbreedingCoeff=0.6374;MQ=59.53;MQ0=4;MQRankSum=-6.233;QD=33.93;ReadPosRankSum=-3.492;VQSLOD=4.1158;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.12:0,57,2188	1/1:1,15:16:30.10:822,30,0	0/1:19,0:12:18.37:18,0,375	0/1:16,0:6:17.18:30,0,17	1/1:15,9:24:69.22:1448,69,0	0/0:25,0:24:69.22:0,69,2494	0/0:24,0:24:66.22:0,66,2554	1/1:13,4:16:38.33:706,38,0	0/0:20,0:20:53.85:0,54,1382	1/1:7,20:25:62.98:1153,63,0	1/1:4,18:22:42.08:786,42,0	0/0:17,0:17:41.90:0,42,817	0/0:16,0:15:33.16:0,33,792	0/0:25,0:25:53.99:0,54,1246	1/1:1,17:18:18:453,18,0	0/1:16,9:25:15.32:1329,0,15	0/0:28,0:28:72.67:0,73,2327	0/0:22,0:22:33.14:0,33,793	1/1:4,14:17:47.88:654,48,0	1/1:5,23:28:72.23:1560,72,0	1/1:2,11:13:11.93:291,12,0	0/0:28,0:28:78.49:0,78,2756	0/0:20,0:20:54.12:0,54,1589	0/0:25,0:24:66.19:0,66,2423	0/0:28,0:28:79.54:0,80,2976	0/1:25,0:25:63.03:78,0,63	1/1:2,20:22:26.97:714,27,0	0/1:7,0:7:32.82:33,0,48
chr10	79135814	.	AAACAAAAC	A	8733.11	PASS	AB=0.980;AC=24;AF=0.429;AN=56;BaseQRankSum=6.965;DP=589;FS=0.711;HRun=0;HaplotypeScore=175.9892;InbreedingCoeff=0.8357;MQ=58.65;MQ0=4;MQRankSum=-6.953;QD=33.85;ReadPosRankSum=-3.900;VQSLOD=3.9808;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.11:0,57,1963	1/1:16,0:16:30.10:665,30,0	0/0:18,0:11:14.94:0,15,339	0/0:16,0:6:0.27:0,0,21	1/1:23,1:24:69.21:1219,69,0	0/0:25,0:24:72.23:0,72,2302	0/0:24,0:24:66.21:0,66,2314	1/1:18,0:17:40.94:578,41,0	0/0:19,0:19:53.83:0,54,1165	1/1:27,0:25:61.99:999,62,0	1/1:21,0:21:40.81:630,41,0	0/0:17,0:17:41.65:0,42,687	0/0:15,0:14:25.69:0,26,652	0/0:25,0:25:53.95:0,54,1040	1/1:17,1:18:17.65:350,18,0	0/1:23,1:24:2.94:1172,0,3	0/0:28,0:28:72.67:0,73,2123	0/0:22,0:22:16.43:0,16,638	1/1:17,1:17:46.56:579,47,0	1/1:25,2:27:70.95:1309,71,0	1/1:12,0:12:12.04:254,12,0	0/0:28,0:28:84.02:0,84,2529	0/0:21,0:21:57.12:0,57,1477	0/0:25,0:24:66.17:0,66,2216	0/0:28,0:28:78.40:0,78,2690	1/1:25,0:25:36.09:280,36,0	1/1:21,1:21:26.63:626,27,0	0/1:6,0:6:20.24:72,0,20
chr10	79135816	.	AC	A	2433.48	PASS	AB=0.951;AC=30;AF=0.536;AN=56;BaseQRankSum=13.439;DP=581;FS=6.708;HRun=1;HaplotypeScore=124.6853;InbreedingCoeff=0.3949;MQ=58.61;MQ0=4;MQRankSum=-7.257;QD=6.65;ReadPosRankSum=1.784;VQSLOD=0.7254;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:48.59:0,49,760	1/1:16,0:16:12.88:104,13,0	0/0:17,0:10:19.19:0,19,156	0/1:15,1:6:11.74:12,0,12	1/1:23,1:24:3.65:332,4,0	0/0:25,0:24:66.35:0,66,961	0/0:23,0:23:66.01:0,66,914	0/1:17,0:16:76.07:130,0,76	1/1:18,1:19:27.87:166,28,0	0/1:26,0:24:34.47:157,0,34	1/1:20,0:20:6.81:140,7,0	0/1:16,0:16:42.64:52,0,43	0/1:15,0:14:1.33:48,0,1	1/1:24,0:24:14.57:127,15,0	1/1:18,0:18:1.57:59,2,0	1/1:23,0:23:49.86:305,50,0	0/0:27,0:27:72.21:0,72,996	1/1:20,0:20:14.80:118,15,0	0/1:18,0:17:61.94:114,0,62	1/1:27,0:27:6.99:220,7,0	0/1:12,0:12:3.68:30,0,4	0/0:29,0:29:87.09:0,87,1173	0/0:20,0:20:57.14:0,57,761	0/0:25,0:24:66.19:0,66,908	0/0:29,0:29:77.95:0,78,1135	1/1:24,3:27:16.33:367,16,0	1/1:21,0:21:10.26:96,10,0	0/1:3,0:6:27.27:51,0,27
chr10	79135817	.	CA	C	1887.50	PASS	AB=0.995;AC=23;AF=0.411;AN=56;BaseQRankSum=10.779;DP=583;FS=17.859;HRun=4;HaplotypeScore=128.1153;InbreedingCoeff=0.3031;MQ=59.37;MQ0=4;MQRankSum=-5.739;QD=5.99;ReadPosRankSum=5.375;VQSLOD=-0.4319;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:59.78:0,60,778	0/1:15,0:16:6.49:32,0,6	0/0:17,0:10:17.75:0,18,149	0/0:17,0:6:5.70:0,6,29	0/1:24,0:24:37.46:37,0,60	0/0:25,0:24:66.21:0,66,905	0/0:23,0:23:66.05:0,66,869	0/0:17,0:17:16.43:0,16,194	1/1:17,2:19:43.32:445,43,0	0/1:26,0:24:14.61:15,0,75	0/1:20,0:20:11.46:15,0,11	1/1:10,6:16:28.65:268,29,0	1/1:9,6:14:26.70:300,27,0	1/1:17,7:24:17.71:376,18,0	0/1:18,0:18:9.29:15,0,9	0/1:20,1:23:31.36:71,0,31	0/0:26,0:26:66.10:0,66,854	1/1:16,4:20:39.49:388,39,0	0/0:19,0:18:4.08:0,4,85	0/1:27,0:27:41.94:46,0,42	1/1:12,0:12:4.45:17,4,0	0/0:29,0:29:81.25:0,81,1081	0/0:19,0:19:53.99:0,54,672	0/0:25,0:24:66.20:0,66,886	0/0:30,0:30:86.62:0,87,1117	0/1:26,0:27:3.50:4,0,168	1/1:22,0:21:0.25:36,0,0	0/1:6,0:6:7.01:7,0,44
chr10	79135819	.	AAAC	A	3924.94	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=12.017;DP=589;FS=0.711;HRun=0;HaplotypeScore=141.3444;InbreedingCoeff=0.6349;MQ=59.66;MQ0=4;MQRankSum=-7.704;QD=11.86;ReadPosRankSum=-4.822;VQSLOD=2.2778;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:47.86:0,48,967	1/1:16,0:16:29.42:239,29,0	0/1:18,0:11:13.34:13,0,191	0/1:16,0:6:0.19:0,0,20	1/1:24,0:24:66.77:489,67,0	0/0:25,0:24:72.14:0,72,1096	0/0:23,0:23:66.10:0,66,1056	1/1:18,2:19:16.15:222,16,0	0/0:21,0:21:29.60:0,30,156	1/1:25,1:24:48.46:371,48,0	1/1:19,2:21:39.25:265,39,0	0/0:15,0:15:0.74:0,1,57	0/1:15,0:14:24.30:57,0,24	0/0:24,0:24:4.40:0,4,122	1/1:18,0:18:17.27:119,17,0	1/1:23,0:23:54.30:464,54,0	0/0:25,0:25:65.84:0,66,967	0/1:20,0:20:37.72:61,0,38	1/1:18,1:18:16.74:245,17,0	1/1:27,0:27:68.39:463,68,0	1/1:11,1:12:11.98:110,12,0	0/0:28,0:28:68.90:0,69,1146	0/0:20,0:20:51.05:0,51,670	0/0:25,0:24:68.75:0,69,1094	0/0:30,0:30:81.32:0,81,1294	1/1:28,0:28:61.21:522,61,0	1/1:22,0:21:26.20:207,26,0	0/1:6,0:6:5.75:77,0,6
chr10	79135822	.	C	CA	1800.08	PASS	AB=0.979;AC=32;AF=0.571;AN=56;BaseQRankSum=7.528;DP=611;FS=6.106;HRun=12;HaplotypeScore=132.9032;InbreedingCoeff=0.2510;MQ=61.45;MQ0=4;MQRankSum=-0.068;QD=4.04;ReadPosRankSum=-5.706;VQSLOD=-0.1612;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:20,2:22:9.86:10,0,285	1/1:16,0:16:5.62:44,6,0	0/1:20,0:13:33.87:34,0,54	0/1:16,0:6:4.25:23,0,4	1/1:23,2:25:11.83:137,12,0	0/0:23,1:24:32.49:0,32,389	0/0:21,1:23:26.47:0,26,343	1/1:16,6:21:8.39:220,8,0	0/1:22,0:22:18.90:86,0,19	1/1:25,0:25:1.04:134,1,0	0/1:21,0:21:0.91:84,0,1	1/1:16,0:16:20.08:112,20,0	1/1:17,0:16:31.56:169,32,0	1/1:25,0:25:30.54:169,31,0	1/1:18,0:18:3.36:30,3,0	0/1:23,0:23:8.75:153,0,9	0/0:23,0:27:47.73:0,48,321	1/1:22,0:22:19.68:104,20,0	1/1:20,0:20:7.40:195,7,0	0/1:30,0:30:2.78:148,0,3	1/1:12,0:12:2.90:17,3,0	0/0:24,3:27:1.29:0,1,329	0/1:17,3:21:2.50:3,0,132	0/0:24,1:25:32.44:0,32,389	0/0:29,1:31:20.28:0,20,394	0/1:28,0:28:50.42:82,0,50	0/1:22,0:21:4.36:23,0,4	0/0:6,0:6:9.35:0,9,40
chr10	79135834	.	A	AC	1633.19	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=4.473;DP=611;FS=1.920;HRun=2;HaplotypeScore=123.7588;InbreedingCoeff=0.9104;MQ=70.47;MQ0=4;MQRankSum=1.634;QD=13.28;ReadPosRankSum=1.849;VQSLOD=3.0593;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:49.70:0,50,605	0/0:17,0:17:25.74:0,26,206	0/0:25,0:21:35.56:0,36,353	0/0:11,0:7:12.53:0,13,114	0/0:20,0:20:20.99:0,21,226	0/0:23,0:22:58.11:0,58,724	0/0:24,0:24:58.07:0,58,704	0/0:30,0:30:42.39:0,42,428	1/1:22,2:25:61.40:576,61,0	0/0:25,0:23:35.54:0,36,343	0/1:16,0:16:0.49:0,0,115	1/1:1,11:17:21.04:240,21,0	1/1:4,9:19:27.95:319,28,0	1/1:0,15:22:36.05:426,36,0	0/0:26,0:26:35.12:0,35,322	0/0:24,0:24:38.85:0,39,339	0/0:25,0:25:59.93:0,60,641	1/1:4,15:23:23.92:245,24,0	0/0:19,0:18:11.60:0,12,175	0/0:27,0:27:11.21:0,11,333	0/0:13,0:13:17.83:0,18,132	0/0:26,0:26:58.10:0,58,664	0/0:17,0:17:34.59:0,35,360	0/0:32,0:31:72.18:0,72,827	0/0:30,0:30:65.59:0,66,847	0/0:24,0:24:54.27:0,54,452	0/0:20,0:20:23.08:0,23,204	0/0:7,0:7:17.99:0,18,167
chr10	79136394	.	CT	C	579.34	PASS	AB=0.889;AC=3;AF=0.054;AN=56;BaseQRankSum=6.482;DP=610;FS=8.415;HRun=7;HaplotypeScore=63.7363;InbreedingCoeff=0.6878;MQ=78.89;MQ0=0;MQRankSum=-1.476;QD=17.56;ReadPosRankSum=0.210;VQSLOD=2.8910;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.24:0,75,943	0/0:12,0:12:36.12:0,36,453	0/0:17,0:17:48:0,48,524	0/0:14,0:15:16.12:0,16,205	0/0:28,0:28:81.26:0,81,1018	0/0:18,0:18:54.16:0,54,666	0/0:19,0:19:51.15:0,51,628	0/0:22,0:22:51.15:0,51,630	1/1:1,24:25:66.15:673,66,0	0/0:25,0:25:63.20:0,63,782	0/0:22,0:22:63.20:0,63,788	0/0:26,0:26:72.20:0,72,880	0/0:28,0:28:75.24:0,75,938	0/0:17,0:17:48.15:0,48,603	0/0:15,0:15:39.12:0,39,491	0/0:21,0:21:60.19:0,60,755	0/0:21,0:21:60.16:0,60,727	0/0:27,0:27:72.20:0,72,889	0/0:19,0:19:57.18:0,57,717	0/0:28,0:28:75.23:0,75,932	0/0:16,0:16:45.14:0,45,566	0/0:23,0:23:69.22:0,69,868	0/0:26,0:26:78.25:0,78,976	0/0:21,0:21:60.18:0,60,742	0/0:22,0:22:57.18:0,57,717	0/0:31,0:31:87.28:0,87,1095	0/0:32,0:32:93.27:0,93,1142	0/1:7,1:8:6.53:7,0,240
chr10	79136811	.	CT	C	9886.96	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=11.866;DP=716;FS=9.041;HRun=10;HaplotypeScore=72.1802;InbreedingCoeff=0.9653;MQ=83.16;MQ0=0;MQRankSum=-1.708;QD=21.59;ReadPosRankSum=1.453;VQSLOD=5.6363;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.17:0,81,896	1/1:0,14:14:41.99:365,42,0	0/0:32,1:29:37.66:0,38,623	0/0:19,1:19:9.74:0,10,304	1/1:1,29:30:44.90:618,45,0	0/0:32,0:32:84.23:0,84,929	0/0:19,0:19:54.13:0,54,589	1/1:5,29:34:85.92:721,86,0	1/1:4,23:27:68.98:599,69,0	1/1:4,32:36:95.98:834,96,0	1/1:3,14:17:38.98:338,39,0	1/1:0,16:16:47.99:417,48,0	1/1:3,13:16:17.12:268,17,0	1/1:0,30:30:86.98:755,87,0	1/1:4,37:41:99:912,105,0	1/1:2,23:26:68.02:579,68,0	0/0:21,0:21:60.16:0,60,664	1/1:1,20:21:41.99:365,42,0	1/1:4,22:26:65.96:568,66,0	1/1:5,19:24:56.96:495,57,0	1/1:5,23:30:3.69:467,4,0	0/0:24,0:24:48.10:0,48,519	0/0:20,0:20:48.13:0,48,531	0/0:28,2:30:26.10:0,26,744	0/0:28,1:29:55.16:0,55,834	1/1:0,24:24:71.99:625,72,0	1/1:2,35:37:95.98:833,96,0	1/1:2,7:9:15:130,15,0
chr10	79137167	.	T	TTGTGTG	545.43	PASS	AB=0.973;AC=25;AF=0.500;AN=50;BaseQRankSum=1.238;DP=558;FS=14.882;HRun=0;HaplotypeScore=160.1827;InbreedingCoeff=0.2700;MQ=65.78;MQ0=7;MQRankSum=-0.768;QD=1.66;ReadPosRankSum=-3.216;VQSLOD=1.1394;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:27:0.21:0,0,1	1/1:8,0:11:2.50:9,2,0	./.	./.	0/1:18,0:21:1.29:1,0,54	0/0:17,0:17:12.04:0,12,238	0/0:17,0:17:2.69:0,3,49	1/1:23,0:22:2.51:7,3,0	1/1:19,5:27:5.95:191,6,0	1/1:19,0:19:9.78:71,10,0	1/1:12,0:12:2.99:24,3,0	0/1:15,0:15:0:0,0,0	1/1:14,0:14:2.99:24,3,0	0/1:19,0:19:0.34:0,0,14	1/1:17,0:17:5.89:65,6,0	0/0:12,0:15:3.52:0,4,62	0/1:27,0:28:61.34:61,0,212	1/1:17,0:16:9.50:125,10,0	0/1:21,0:20:43.29:43,0,51	0/0:9,0:14:4.35:0,4,27	0/1:48,0:48:57.33:57,0,183	0/0:16,0:16:3.01:0,3,60	0/0:12,0:12:8.64:0,9,90	0/0:31,0:31:14.93:0,15,293	0/0:12,0:19:9.03:0,9,125	1/1:20,0:20:2.51:7,3,0	0/1:13,0:14:0.04:0,0,56	./.
chr10	79137363	.	CT	C	1448.60	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.675;DP=528;FS=2.864;HRun=10;HaplotypeScore=51.4979;InbreedingCoeff=0.9405;MQ=61.83;MQ0=0;MQRankSum=-2.280;QD=17.88;ReadPosRankSum=1.023;VQSLOD=4.2708;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:56.64:0,57,606	0/0:8,0:8:21.06:0,21,232	0/0:8,0:8:18.01:0,18,175	0/0:9,0:9:12.03:0,12,127	0/0:22,0:22:57.13:0,57,615	0/0:18,0:18:45.10:0,45,481	0/0:15,0:15:42.09:0,42,448	0/0:39,1:41:70.18:0,70,988	1/1:2,17:21:30.12:404,30,0	0/0:28,0:28:75.20:0,75,823	0/0:15,0:15:42.11:0,42,465	1/1:1,13:14:35.99:313,36,0	1/1:2,15:17:11.83:331,12,0	1/1:3,15:18:41.99:365,42,0	0/0:17,0:17:45.12:0,45,498	0/0:20,0:20:48.10:0,48,513	0/0:19,1:20:25.08:0,25,505	1/1:1,10:11:23.99:208,24,0	0/0:16,0:16:33.09:0,33,365	0/0:27,2:29:26.11:0,26,744	0/0:11,0:11:27.02:0,27,278	0/0:24,2:26:2.93:0,3,480	0/0:20,0:20:42.14:0,42,566	0/0:36,0:36:99:0,99,1086	0/0:18,0:18:48.11:0,48,522	0/0:15,0:15:42.11:0,42,465	0/0:26,0:26:46.98:0,47,677	0/0:9,0:9:21.04:0,21,223
chr10	79138448	.	ACAC	A	1781.67	PASS	AB=0.992;AC=23;AF=0.426;AN=54;BaseQRankSum=4.119;DP=646;FS=2.260;HRun=0;HaplotypeScore=110.0064;InbreedingCoeff=0.7517;MQ=62.81;MQ0=39;MQRankSum=-2.215;QD=7.81;ReadPosRankSum=-3.144;VQSLOD=2.4352;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:29.29:0,29,1170	1/1:6,0:6:1.56:58,2,0	0/0:54,1:34:19.79:0,20,942	0/0:56,0:33:56.77:0,57,975	1/1:7,0:3:2.81:20,3,0	0/0:23,0:23:54.13:0,54,994	0/0:28,0:28:75.26:0,75,1491	1/1:8,8:13:21.07:308,21,0	1/1:19,6:22:29.96:375,30,0	0/1:21,0:18:1.06:94,0,1	1/1:14,0:14:3.47:27,3,0	0/0:23,0:23:54.18:0,54,1035	0/0:22,0:22:53.73:0,54,918	0/0:23,0:23:54.13:0,54,1020	1/1:20,0:20:14.89:114,15,0	1/1:19,0:17:17.58:153,18,0	0/0:33,0:33:84.29:0,84,1642	0/0:16,0:16:36.79:0,37,789	1/1:16,0:16:26.05:285,26,0	1/1:14,1:14:14.49:105,14,0	0/1:38,1:36:1.75:50,0,2	0/0:19,0:19:45.14:0,45,863	0/0:16,0:16:36.10:0,36,638	0/0:47,0:47:99:0,120,2274	0/0:21,0:20:17.54:0,18,648	1/1:17,0:15:34.23:347,34,0	0/1:13,0:12:10.81:45,0,11	./.
chr10	79138607	.	C	CA	9810.38	PASS	AB=0.935;AC=23;AF=0.411;AN=56;BaseQRankSum=-0.350;DP=681;FS=23.126;HRun=2;HaplotypeScore=79.9633;InbreedingCoeff=0.9128;MQ=94.16;MQ0=0;MQRankSum=-2.510;QD=36.20;ReadPosRankSum=1.065;VQSLOD=2.9241;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:99:0,114,1445	1/1:0,11:11:30.05:424,30,0	0/0:32,0:32:92.96:0,93,1156	0/0:31,0:32:66.27:0,66,938	1/1:0,25:25:72.24:1079,72,0	0/0:25,0:25:72.21:0,72,908	0/0:25,0:25:72.21:0,72,907	1/1:0,29:29:87.23:1238,87,0	0/0:18,0:18:54.12:0,54,667	1/1:0,25:25:75.25:1104,75,0	1/1:0,21:21:54.18:809,54,0	0/0:30,0:30:90.28:0,90,1154	0/0:28,0:28:75.24:0,75,968	0/0:21,0:21:63.19:0,63,803	1/1:1,19:20:51.17:763,51,0	1/1:1,16:17:3.18:545,3,0	0/0:19,0:19:54.18:0,54,701	0/0:20,0:19:54.12:0,54,666	1/1:0,19:19:57.17:832,57,0	1/1:1,27:28:78.26:1168,78,0	1/1:0,33:33:84.28:1258,84,0	0/0:32,0:32:96.29:0,96,1220	0/0:29,0:29:87.24:0,87,1096	0/0:26,0:26:72.19:0,72,916	0/0:20,0:20:57.17:0,57,726	0/1:27,2:29:7.46:7,0,874	1/1:0,14:14:39.13:584,39,0	0/0:10,0:10:30.08:0,30,373
chr10	79139483	.	CT	C	1086.49	PASS	AB=0.928;AC=13;AF=0.232;AN=56;BaseQRankSum=6.177;DP=490;FS=2.175;HRun=13;HaplotypeScore=60.4021;InbreedingCoeff=0.6610;MQ=68.40;MQ0=0;MQRankSum=1.121;QD=7.65;ReadPosRankSum=0.783;VQSLOD=2.4864;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:22:23.89:0,24,114	0/0:8,0:9:11.18:0,11,140	0/1:6,0:7:2.51:3,0,21	0/1:7,0:7:8.71:9,0,9	0/0:17,0:17:28.38:0,28,357	0/1:14,2:20:5.10:5,0,242	0/0:22,1:23:38.11:0,38,511	0/0:22,1:24:17.44:0,17,306	1/1:6,21:27:56.57:416,57,0	0/0:14,1:15:5.16:0,5,212	0/0:11,0:13:20.03:0,20,213	1/1:5,9:15:22.88:159,23,0	1/1:10,12:23:33.74:244,34,0	1/1:18,11:29:40.59:288,41,0	0/0:27,0:28:9.30:0,9,474	0/0:14,1:15:5.12:0,5,207	0/0:21,0:21:45.05:0,45,427	1/1:5,7:13:19.87:137,20,0	0/0:12,0:12:21.01:0,21,195	0/0:17,0:17:38.83:0,39,350	0/0:13,1:14:11.19:0,11,262	0/0:14,1:16:16.97:0,17,303	0/0:20,1:23:28.15:0,28,438	0/0:12,0:15:32.89:0,33,306	0/0:5,0:14:20.16:0,20,120	0/0:13,1:15:7.96:0,8,217	0/0:24,0:25:42.97:0,43,491	0/0:10,0:10:2.40:0,2,100
chr10	79140662	.	C	CCA	634.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.816;DP=683;FS=2.234;HRun=0;HaplotypeScore=83.4054;InbreedingCoeff=0.9844;MQ=80.68;MQ0=0;MQRankSum=-2.355;QD=39.68;ReadPosRankSum=-0.482;VQSLOD=5.3107;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,141,1881	0/0:17,0:17:45.14:0,45,596	0/0:19,0:19:45.12:0,45,572	0/0:18,0:18:54.15:0,54,710	0/0:26,0:26:72.24:0,72,988	0/0:18,0:18:51.16:0,51,685	0/0:28,0:28:75.19:0,75,976	0/0:29,0:29:84.26:0,84,1111	1/1:3,13:16:42.14:730,42,0	0/0:29,0:29:81.25:0,81,1073	0/0:16,0:16:45.11:0,45,597	0/0:29,0:29:75.24:0,75,1015	0/0:28,0:28:75.25:0,75,1029	0/0:23,0:23:66.21:0,66,890	0/0:16,0:16:48.14:0,48,630	0/0:24,0:24:63.21:0,63,864	0/0:39,0:39:99:0,102,1400	0/0:26,0:26:63.20:0,63,849	0/0:17,0:17:45.15:0,45,618	0/0:20,0:19:51.17:0,51,701	0/0:53,0:53:99:0,160,2150	0/0:21,0:21:63.17:0,63,843	0/0:21,0:21:60.19:0,60,806	0/0:35,0:35:81.26:0,81,1097	0/0:18,0:18:54.16:0,54,723	0/0:19,0:19:51.17:0,51,699	0/0:21,0:21:60.20:0,60,824	0/0:5,0:5:15.05:0,15,206
chr10	79142462	.	G	GGTGT	4403.05	PASS	AB=1.000;AC=37;AF=0.712;AN=52;BaseQRankSum=7.965;DP=691;FS=6.895;HRun=0;HaplotypeScore=186.7208;InbreedingCoeff=0.8194;MQ=63.94;MQ0=8;MQRankSum=-8.386;QD=9.12;ReadPosRankSum=-2.485;VQSLOD=3.3947;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:44,5:49:4.37:75,4,0	1/1:3,0:3:3.01:49,3,0	./.	./.	1/1:34,0:34:11.44:197,11,0	0/0:25,0:25:42.07:0,42,529	0/0:16,0:15:21.07:0,21,329	1/1:44,0:44:27.08:422,27,0	0/0:16,0:25:13.72:0,14,256	1/1:27,0:27:27.09:463,27,0	1/1:24,0:24:17.09:252,17,0	1/1:10,8:17:9.03:213,9,0	1/1:8,5:15:18.27:367,18,0	1/1:12,4:25:11.30:108,11,0	1/1:29,0:29:21.07:349,21,0	1/1:17,0:17:9.03:148,9,0	0/0:22,0:25:38.57:0,39,589	1/1:16,6:25:10.85:263,11,0	1/1:19,0:19:12.04:198,12,0	1/1:31,0:31:21.07:349,21,0	0/1:23,0:21:0:0,0,0	0/0:16,0:18:21.03:0,21,249	0/0:17,0:17:21.06:0,21,305	0/0:21,0:26:45.12:0,45,626	1/1:26,0:26:3.01:69,3,0	1/1:25,0:25:15.03:239,15,0	1/1:31,0:31:33.10:525,33,0	1/1:14,0:16:8.52:117,9,0
chr10	79142471	.	G	GTGTGTGTGTT	10577.43	PASS	AB=0.990;AC=26;AF=0.464;AN=56;BaseQRankSum=1.807;DP=699;FS=5.605;HRun=0;HaplotypeScore=230.8239;InbreedingCoeff=0.6498;MQ=53.58;MQ0=10;MQRankSum=-8.013;QD=28.59;ReadPosRankSum=-0.850;VQSLOD=3.9585;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:50:24.09:0,24,289	1/1:0,3:5:5.53:174,6,0	0/0:29,0:16:18.81:0,19,167	0/0:24,0:9:9.01:0,9,85	1/1:31,2:33:56.73:877,57,0	0/0:28,0:28:66.10:0,66,1264	0/0:19,0:18:44.98:0,45,847	1/1:43,0:43:52.65:1331,53,0	0/0:27,0:26:66.47:0,66,1024	1/1:4,19:28:53.24:1338,53,0	1/1:5,16:24:32.08:874,32,0	0/0:19,0:18:4.90:0,5,66	0/0:14,0:14:9.90:0,10,119	0/0:22,0:22:24.23:0,24,221	1/1:25,4:29:58.58:1256,59,0	1/1:9,6:19:9.34:344,9,0	0/0:29,0:29:62.74:0,63,1335	0/1:28,0:28:99:187,0,131	1/1:13,1:14:10.06:720,10,0	1/1:28,6:34:76.08:1437,76,0	1/1:20,0:18:18.18:151,18,0	0/0:16,0:16:42.04:0,42,705	0/0:20,0:20:56.98:0,57,874	0/0:30,0:30:52.49:0,52,1553	0/1:23,0:23:40.62:41,0,166	0/1:23,1:24:99:233,0,318	1/1:30,1:31:77.04:1598,77,0	0/1:15,0:15:16.86:17,0,93
chr10	79142473	.	G	GTGTGTGTT	5616.98	PASS	AB=0.998;AC=22;AF=0.393;AN=56;BaseQRankSum=1.345;DP=698;FS=3.144;HRun=0;HaplotypeScore=191.6580;InbreedingCoeff=0.0474;MQ=51.63;MQ0=11;MQRankSum=-6.634;QD=14.01;ReadPosRankSum=2.284;VQSLOD=3.8562;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:50:27.26:0,27,296	1/1:5,0:5:5.98:128,6,0	0/0:27,0:14:16.90:0,17,171	0/0:25,0:9:2.17:0,2,51	0/1:32,1:33:70.33:455,0,70	0/0:27,0:27:69.10:0,69,1181	0/0:19,0:18:47.97:0,48,785	0/1:42,0:42:99:430,0,119	0/0:27,0:26:66.02:0,66,906	0/1:28,0:28:55.95:740,0,56	1/1:21,1:22:20.90:623,21,0	0/1:19,0:18:22.81:23,0,76	0/1:14,0:14:42.16:42,0,79	0/0:23,0:23:15.33:0,15,202	0/1:29,0:29:51.63:580,0,52	1/1:17,1:18:8.49:255,8,0	0/0:30,0:29:69.30:0,69,1239	0/1:27,0:27:99:115,0,162	0/1:15,0:15:63.79:229,0,64	0/1:35,0:35:21.67:843,0,22	1/1:20,0:18:18.21:151,18,0	0/0:16,0:16:42.03:0,42,635	0/0:21,0:21:56.98:0,57,817	0/0:30,0:30:80.13:0,80,1406	0/1:23,0:23:40.62:41,0,166	0/1:25,0:25:44.53:45,0,392	1/1:30,1:31:24.94:904,25,0	0/1:15,0:15:14.47:14,0,98
chr10	79142566	.	C	CTGTTA	23190.35	PASS	AB=0.727;AC=22;AF=0.393;AN=56;BaseQRankSum=5.637;DP=704;FS=3.710;HRun=0;HaplotypeScore=150.2936;InbreedingCoeff=0.8497;MQ=72.36;MQ0=1;MQRankSum=-18.023;QD=68.81;ReadPosRankSum=-3.102;VQSLOD=5.0692;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,2195	1/1:1,9:11:30.02:885,30,0	0/0:19,0:19:50.35:0,50,1106	0/0:21,0:21:63.17:0,63,1301	1/1:0,29:35:86.86:2412,87,0	0/0:28,0:28:84.27:0,84,1826	0/0:23,0:23:63.22:0,63,1386	1/1:6,23:40:99:3069,111,0	0/0:30,0:30:87.26:0,87,1813	1/1:0,27:29:84.27:2632,84,0	1/1:5,15:26:62.94:1697,63,0	0/0:18,0:18:51.16:0,51,1073	0/0:16,0:16:45.15:0,45,1003	0/0:21,0:21:63.18:0,63,1318	1/1:5,23:31:72.11:2152,72,0	0/1:3,24:28:55.04:2237,0,55	0/0:32,0:31:87.27:0,87,1870	0/0:18,0:18:54.18:0,54,1164	1/1:6,15:25:63.11:1586,63,0	1/1:5,26:34:95.95:2621,96,0	1/1:4,7:16:24.08:766,24,0	0/0:20,0:20:57.20:0,57,1271	0/0:29,0:29:87.30:0,87,1922	0/0:22,0:22:60.18:0,60,1252	0/0:24,0:24:72.25:0,72,1546	0/1:23,1:25:49.30:49,0,1359	1/1:1,31:37:96.33:3086,96,0	0/0:9,0:9:27.09:0,27,602
chr10	79143130	.	C	CATGTGTGTGTATGTGT	9123.97	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=0.025;DP=645;FS=12.810;HRun=0;HaplotypeScore=256.2987;InbreedingCoeff=0.8891;MQ=60.12;MQ0=9;MQRankSum=-4.789;QD=28.16;ReadPosRankSum=-4.441;VQSLOD=1.9652;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:57.06:0,57,1278	1/1:11,0:11:21.05:305,21,0	0/0:24,0:12:18.05:0,18,255	0/0:33,0:14:16.40:0,16,234	1/1:21,0:21:17.04:468,17,0	0/0:22,0:22:62.06:0,62,1507	0/0:23,0:23:57.12:0,57,1146	1/1:41,0:39:99:1827,102,0	1/1:32,0:31:14.68:189,15,0	1/1:29,0:27:69.19:1852,69,0	1/1:13,0:12:12.03:175,12,0	0/0:26,0:26:59.53:0,60,1225	0/0:17,0:17:30.03:0,30,522	0/0:17,0:17:29.74:0,30,571	1/1:9,18:32:15.05:764,15,0	1/1:16,0:16:19.29:442,19,0	0/0:22,0:21:41.08:0,41,1197	0/0:18,0:18:31.15:0,31,869	1/1:5,10:23:63.07:1439,63,0	1/1:3,8:20:6.01:256,6,0	1/1:36,0:36:37.60:515,38,0	0/0:12,0:12:10.17:0,10,699	0/0:15,0:14:30.07:0,30,731	0/0:28,0:28:52.19:0,52,1760	0/0:17,0:16:33.08:0,33,671	0/1:18,0:18:82.61:83,0,352	1/1:11,10:32:14.92:809,15,0	0/0:10,0:10:20.64:0,21,254
chr10	79143131	.	A	ATG	2223.01	PASS	AB=0.902;AC=24;AF=0.480;AN=50;BaseQRankSum=0.333;DP=655;FS=13.664;HRun=0;HaplotypeScore=129.6661;InbreedingCoeff=0.0198;MQ=58.91;MQ0=9;MQRankSum=-1.849;QD=4.90;ReadPosRankSum=1.255;VQSLOD=2.2909;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,20:45:30:412,0,30	./.	./.	0/1:32,0:13:0:0,0,0	0/1:21,0:21:0.12:0,0,0	0/0:18,0:25:41.08:0,41,331	0/0:19,0:23:38.11:0,38,331	0/1:42,0:40:33.30:35,0,33	1/1:32,0:31:29.23:211,29,0	0/1:29,0:27:47.32:51,0,47	0/1:14,0:13:0:0,0,0	0/1:14,11:27:11.07:414,0,11	1/1:13,3:17:15.04:205,15,0	0/1:13,4:17:76.85:117,0,77	1/1:28,1:29:8.98:73,9,0	./.	0/0:19,0:22:32.42:0,32,286	0/1:17,3:20:99:185,0,132	0/1:20,0:20:23.81:26,0,24	0/1:20,0:20:18.46:18,0,19	0/0:34,0:34:9.40:0,9,69	0/1:13,0:14:19.97:20,0,155	0/0:15,0:14:15.04:0,15,165	0/0:26,0:29:44.40:0,44,406	1/1:11,8:18:18.06:270,18,0	0/1:17,1:18:8.78:206,0,9	1/1:27,0:27:7.27:71,7,0	0/1:4,0:10:21.02:67,0,21
chr10	79143139	.	G	GTA	2369.46	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=8.256;DP=665;FS=0.000;HRun=0;HaplotypeScore=122.5177;InbreedingCoeff=-0.2595;MQ=52.07;MQ0=12;MQRankSum=1.842;QD=5.20;ReadPosRankSum=4.720;VQSLOD=2.5863;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:48,0:47:99:135,0,320	1/1:11,0:11:1.89:130,2,0	0/0:24,0:9:23.89:0,24,191	0/0:35,0:12:20.49:0,20,182	0/1:22,0:22:7.43:102,0,7	0/0:26,0:26:71.83:0,72,734	0/0:26,0:26:65.95:0,66,695	0/1:40,0:38:99:523,0,171	1/1:24,8:31:37.60:431,38,0	0/1:31,0:29:99:260,0,201	0/1:16,0:15:28.89:82,0,29	0/1:28,0:28:99:139,0,261	0/1:15,0:15:56.24:56,0,90	0/1:14,0:14:27.37:27,0,239	0/1:27,0:27:52.53:53,0,53	1/1:14,0:14:2.13:101,2,0	0/0:23,0:22:62.93:0,63,649	0/1:23,0:23:36.02:36,0,376	0/1:19,0:18:99:118,0,171	0/1:22,0:22:8.75:9,0,89	0/1:34,0:34:99:163,0,178	0/0:18,0:18:28.04:0,28,426	0/0:15,0:14:36:0,36,397	0/0:30,0:30:74.95:0,75,817	0/1:18,0:17:92.56:93,0,155	0/1:20,0:20:29.05:29,0,271	0/1:22,0:22:47.92:48,0,80	0/0:11,0:11:7.59:0,8,111
chr10	79143143	.	G	GTATA	671.20	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=8.006;DP=659;FS=10.143;HRun=0;HaplotypeScore=147.8345;InbreedingCoeff=0.1510;MQ=50.69;MQ0=12;MQRankSum=-4.010;QD=4.79;ReadPosRankSum=4.609;VQSLOD=1.9602;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:86.96:0,87,1085	0/0:11,0:11:6.76:0,7,46	0/0:26,0:12:27.08:0,27,379	0/0:35,0:11:20.90:0,21,320	0/0:24,0:24:8.92:0,9,114	0/0:27,0:27:72.11:0,72,1158	0/0:27,0:27:66.22:0,66,1091	0/0:37,0:35:50.31:0,50,591	1/1:22,7:29:32.97:656,33,0	0/1:30,0:28:8:8,0,489	0/0:16,0:15:4.43:0,4,89	0/0:29,0:29:65.92:0,66,771	0/0:12,0:12:8.86:0,9,280	0/0:12,0:12:33.03:0,33,480	0/1:24,0:24:44.33:44,0,135	0/0:14,0:14:6.48:0,6,73	0/0:23,0:22:60.20:0,60,990	0/0:21,0:21:58.99:0,59,780	0/0:17,0:16:17.36:0,17,411	0/1:21,0:21:3.37:3,0,209	0/0:34,0:33:24.36:0,24,412	0/0:19,0:19:45.12:0,45,699	0/0:17,0:16:42.13:0,42,702	0/0:29,0:29:69.23:0,69,1192	0/0:17,0:16:35.75:0,36,414	0/0:21,0:21:9.34:0,9,516	0/1:22,0:22:45.07:45,0,192	0/1:13,0:12:43.23:43,0,245
chr10	79143145	.	G	GTATA	675.43	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=9.216;DP=651;FS=8.436;HRun=0;HaplotypeScore=143.4251;InbreedingCoeff=0.0080;MQ=50.54;MQ0=12;MQRankSum=-3.823;QD=2.79;ReadPosRankSum=2.858;VQSLOD=1.8944;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:51:92.98:0,93,1142	0/1:11,0:11:13.07:13,0,46	0/0:27,0:12:36.02:0,36,468	0/0:35,0:11:9.57:0,10,273	0/1:24,0:24:2.87:3,0,118	0/0:27,0:27:72.24:0,72,1176	0/0:28,0:28:69.21:0,69,1116	0/1:34,0:32:0.20:0,0,502	1/1:13,12:29:31.52:634,32,0	0/1:31,0:29:15.38:15,0,466	0/0:16,0:15:4.27:0,4,86	0/0:28,0:28:68.94:0,69,815	0/0:12,0:12:8.84:0,9,279	0/0:12,0:12:33.03:0,33,481	0/1:22,0:22:43.64:44,0,154	0/0:13,0:13:9.74:0,10,102	0/0:23,0:22:60.18:0,60,974	0/0:20,0:20:59.02:0,59,815	0/0:16,0:15:19.77:0,20,424	0/1:21,0:21:3.17:3,0,220	0/1:34,0:33:17.19:17,0,383	0/0:18,0:18:42.13:0,42,676	0/0:16,0:15:42.14:0,42,721	0/0:29,0:29:72.19:0,72,1172	0/0:16,0:15:35.76:0,36,416	0/0:21,0:21:12.43:0,12,549	0/1:22,0:22:43.81:44,0,191	0/1:13,0:12:42.22:42,0,270
chr10	79143168	.	TGC	T	2264.75	PASS	AB=0.993;AC=19;AF=0.339;AN=56;BaseQRankSum=-1.324;DP=606;FS=10.699;HRun=0;HaplotypeScore=115.7450;InbreedingCoeff=0.4954;MQ=65.84;MQ0=7;MQRankSum=-2.465;QD=9.52;ReadPosRankSum=-4.896;VQSLOD=1.5828;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:95.99:0,96,1173	1/1:6,0:6:5.97:47,6,0	0/0:32,0:24:40.57:0,41,480	0/0:25,0:15:28.16:0,28,318	1/1:22,1:23:35.59:284,36,0	0/0:27,0:27:8.55:0,9,722	0/0:27,0:27:41.98:0,42,768	0/1:24,0:23:90.05:284,0,90	1/1:19,0:19:1.68:169,2,0	0/1:28,1:27:96.18:270,0,96	1/1:15,1:15:5.77:121,6,0	0/0:26,0:26:43.59:0,44,667	0/0:14,0:14:38.86:0,39,384	0/0:10,0:10:27.05:0,27,374	1/1:13,1:14:3.13:122,3,0	1/1:14,0:14:20.97:181,21,0	0/0:22,0:21:14.20:0,14,604	0/0:16,0:16:44.93:0,45,616	0/1:19,0:17:28.74:200,0,29	0/1:21,0:21:4.82:214,0,5	0/1:30,0:29:22.20:305,0,22	0/0:18,0:18:39.12:0,39,548	0/0:18,0:17:47.24:0,47,568	0/0:31,0:31:51.14:0,51,992	0/0:22,0:21:48.03:0,48,493	0/0:23,0:23:66.22:0,66,571	1/1:21,2:23:8.71:253,9,0	0/0:8,0:7:18.02:0,18,221
chr10	79143487	.	TGTGA	T	4498.72	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.608;DP=790;FS=0.000;HRun=0;HaplotypeScore=182.4009;InbreedingCoeff=0.9888;MQ=72.78;MQ0=0;MQRankSum=-4.683;QD=43.26;ReadPosRankSum=1.937;VQSLOD=5.2123;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,117,3058	0/0:11,0:11:21.07:0,21,574	0/0:41,0:38:99:0,101,2416	0/0:49,0:40:89.15:0,89,2176	0/0:15,0:15:33.10:0,33,830	0/0:18,0:18:48.16:0,48,1314	0/0:35,0:35:99:0,105,2714	0/0:30,0:30:87.30:0,87,2314	0/0:25,0:25:66.21:0,66,1748	0/0:31,0:31:93.29:0,93,2442	0/0:14,0:14:30.10:0,30,820	1/1:1,36:37:78.27:1505,78,0	1/1:3,29:32:81.28:1566,81,0	1/1:1,16:17:45.15:866,45,0	0/0:39,0:39:99:0,105,2805	0/0:31,0:31:69.22:0,69,1819	0/0:38,0:38:99:0,114,2951	1/1:2,16:18:14.11:562,14,0	0/0:20,0:20:57.20:0,57,1512	0/0:25,0:25:60.21:0,60,1605	0/0:49,0:49:99:0,120,3184	0/0:31,0:31:93.29:0,93,2443	0/0:23,0:23:60.19:0,60,1552	0/0:36,0:36:99:0,99,2669	0/0:19,0:19:51.18:0,51,1388	0/0:24,0:24:72.25:0,72,1903	0/0:28,0:28:78.27:0,78,2080	0/0:5,0:5:15.05:0,15,411
chr10	79143519	.	CGTGTGTGTGT	C	5475.73	PASS	AB=0.883;AC=29;AF=0.537;AN=54;BaseQRankSum=10.159;DP=778;FS=0.485;HRun=0;HaplotypeScore=269.6761;InbreedingCoeff=0.4437;MQ=55.86;MQ0=6;MQRankSum=-8.204;QD=10.61;ReadPosRankSum=-1.676;VQSLOD=2.5809;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,20:62:19.24:100,0,19	1/1:6,8:15:18.06:507,18,0	1/1:36,0:23:0.47:1,0,0	0/0:41,0:25:3.48:0,3,43	./.	0/0:19,0:20:27.09:0,27,824	0/0:23,0:27:48.16:0,48,1537	1/1:26,11:37:28.14:253,28,0	1/1:8,0:23:18.06:417,18,0	0/1:25,2:27:5.57:283,0,6	1/1:8,7:15:3.01:30,3,0	0/1:27,0:35:12.10:341,0,12	1/1:25,0:35:30.71:629,31,0	1/1:9,0:26:29.89:651,30,0	1/1:30,8:38:33.08:711,33,0	1/1:11,14:27:17.59:440,18,0	0/0:39,0:43:78.74:0,79,2684	0/1:15,0:16:9.09:69,0,9	0/1:16,3:18:7.02:94,0,7	1/1:15,4:19:9.12:342,9,0	0/1:47,0:47:7.45:88,0,7	0/0:33,0:34:51.18:0,51,1820	0/0:18,0:18:33.11:0,33,1004	0/0:33,0:37:60.21:0,60,2177	0/1:12,2:14:10.06:113,0,10	0/0:20,0:21:46.52:0,47,623	1/1:15,8:25:15.05:408,15,0	0/0:6,0:5:9.01:0,9,112
chr10	79144238	.	TAGAGAG	T	262.75	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.022;DP=635;FS=1.503;HRun=0;HaplotypeScore=174.3373;InbreedingCoeff=0.5910;MQ=71.66;MQ0=5;MQRankSum=-2.318;QD=11.94;ReadPosRankSum=-0.674;VQSLOD=2.9421;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:20.94:0,21,493	0/0:9,0:9:9.03:0,9,190	0/0:49,0:34:8.99:0,9,236	0/0:53,0:30:3.57:0,4,273	0/0:26,0:25:14.97:0,15,293	0/0:12,0:13:24.08:0,24,673	0/0:25,0:25:53.58:0,54,1405	0/0:28,0:28:40.69:0,41,850	0/0:17,0:17:0.89:0,1,2	0/0:26,0:25:51.64:0,52,1149	0/0:21,0:21:11.91:0,12,292	0/0:12,0:12:12.03:0,12,210	0/0:13,0:14:21.03:0,21,384	0/0:27,0:29:18.02:0,18,407	0/0:18,0:18:6.02:0,6,148	0/0:29,0:29:39.59:0,40,973	1/1:14,8:22:18.06:353,18,0	0/0:17,0:16:21.07:0,21,489	0/0:12,0:12:18.05:0,18,364	0/0:17,0:17:9.03:0,9,205	0/0:20,0:19:11.86:0,12,288	0/0:16,0:16:30.10:0,30,953	0/0:18,0:18:39.13:0,39,1163	0/0:28,0:29:63.22:0,63,1947	0/0:19,0:19:14.68:0,15,404	0/0:27,0:27:72.23:0,72,1609	0/0:17,0:17:36.12:0,36,785	0/0:14,0:14:30.10:0,30,682
chr10	79144269	.	A	AGAGAGAGAGAGT	9693.85	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=-0.785;DP=598;FS=5.589;HRun=0;HaplotypeScore=253.9301;InbreedingCoeff=0.4403;MQ=52.30;MQ0=8;MQRankSum=-5.315;QD=23.76;ReadPosRankSum=-2.875;VQSLOD=3.1642;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:33:37.28:37,0,139	1/1:10,0:10:7.16:113,7,0	0/0:29,0:18:47.90:0,48,640	0/0:36,0:19:0.59:0,1,368	1/1:17,1:17:8.85:146,9,0	0/0:19,0:19:50.34:0,50,729	0/0:17,0:17:48.11:0,48,1328	1/1:33,0:32:82.34:1085,82,0	1/1:17,0:17:21.71:564,22,0	1/1:28,0:27:65.19:895,65,0	1/1:17,0:17:11.74:192,12,0	0/1:15,0:15:62.92:156,0,63	0/1:18,0:18:99:173,0,124	0/1:24,0:24:11.72:669,0,12	1/1:12,1:12:3.01:186,3,0	1/1:28,7:35:47:1918,47,0	0/0:20,0:20:44.76:0,45,616	0/1:17,0:15:99:494,0,133	1/1:5,7:18:42.35:765,42,0	1/1:22,0:22:21.26:278,21,0	1/1:14,0:14:14.85:239,15,0	0/0:15,0:15:42.29:0,42,866	0/0:24,0:23:65.79:0,66,1290	0/0:30,0:30:81.11:0,81,1856	0/1:20,0:20:99:123,0,110	1/1:25,0:28:26.01:424,26,0	1/1:14,0:16:35.92:1098,36,0	1/1:10,0:10:1.38:138,1,0
chr10	79144298	.	A	AGTGTGTGT	9345.29	PASS	AB=0.615;AC=37;AF=0.661;AN=56;BaseQRankSum=6.735;DP=578;FS=5.951;HRun=0;HaplotypeScore=203.3287;InbreedingCoeff=0.8138;MQ=56.33;MQ0=2;MQRankSum=-9.010;QD=26.03;ReadPosRankSum=-1.682;VQSLOD=3.6099;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:31:6.71:0,7,225	1/1:5,0:8:12.04:305,12,0	0/0:31,0:23:24.08:0,24,457	0/0:30,0:21:28.75:0,29,517	1/1:10,0:14:7.85:215,8,0	0/0:16,0:17:36.11:0,36,770	0/0:16,0:16:18.69:0,19,649	1/1:33,0:33:45.13:881,45,0	1/1:15,0:15:6.02:157,6,0	1/1:28,2:36:51.16:1260,51,0	1/1:16,0:16:5.99:188,6,0	1/1:8,0:22:35.81:725,36,0	1/1:9,1:19:24.54:537,25,0	1/1:6,0:19:18.53:388,19,0	1/1:10,0:18:24.97:826,25,0	1/1:12,0:23:30.10:998,30,0	0/0:25,0:26:0.76:0,1,900	1/1:11,0:16:12.04:259,12,0	1/1:19,0:20:15.05:341,15,0	1/1:13,0:20:24.08:819,24,0	1/1:14,0:14:4.78:116,5,0	0/0:18,0:18:39.10:0,39,887	0/0:21,0:21:42.05:0,42,877	0/0:27,0:28:24.04:0,24,1007	0/1:6,0:16:3.98:4,0,65	1/1:7,0:25:53.92:599,54,0	1/1:10,0:14:21.07:581,21,0	1/1:6,0:10:15:147,15,0
chr10	79145155	.	A	AG	16170.81	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-11.650;DP=549;FS=2.776;HRun=3;HaplotypeScore=51.2901;InbreedingCoeff=0.9968;MQ=74.46;MQ0=0;MQRankSum=-3.404;QD=38.69;ReadPosRankSum=1.899;VQSLOD=5.0639;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:57.19:798,57,0	1/1:1,6:7:18.06:252,18,0	0/0:8,0:8:24.07:0,24,275	0/0:13,0:13:18.88:0,19,296	1/1:0,29:29:81.23:1110,81,0	0/0:16,0:16:42.13:0,42,504	0/0:14,0:14:39.12:0,39,468	1/1:4,28:32:81.25:1116,81,0	1/1:0,17:17:51.17:714,51,0	1/1:0,22:22:66.22:924,66,0	1/1:2,19:21:57.10:766,57,0	1/1:1,16:17:45.15:630,45,0	1/1:4,21:25:69.23:957,69,0	1/1:1,15:16:42.14:588,42,0	1/1:1,20:21:63.21:876,63,0	1/1:2,31:33:90.30:1260,90,0	0/0:23,0:23:60.17:0,60,707	1/1:1,11:12:33.11:454,33,0	1/1:1,17:18:51.17:712,51,0	1/1:0,19:19:51.13:690,51,0	1/1:1,26:27:78.26:1092,78,0	0/0:18,0:18:54.11:0,54,619	0/0:15,0:15:42.13:0,42,502	0/0:24,0:24:63.19:0,63,755	1/1:0,18:18:51.17:713,51,0	1/1:0,29:29:87.29:1218,87,0	1/1:1,25:25:69.23:966,69,0	1/1:0,8:8:24.08:336,24,0
chr10	79145395	.	G	GGA	270.83	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=3.712;DP=568;FS=12.054;HRun=0;HaplotypeScore=140.8543;InbreedingCoeff=0.6014;MQ=67.01;MQ0=0;MQRankSum=-1.436;QD=8.46;ReadPosRankSum=-3.269;VQSLOD=2.0137;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:54.90:0,55,674	0/0:4,0:4:10.85:0,11,128	0/0:17,0:11:30:0,30,350	0/0:16,0:14:7.34:0,7,271	0/0:22,0:22:44.68:0,45,531	0/0:31,0:31:90.27:0,90,1389	0/0:18,0:18:54.17:0,54,849	0/0:27,0:26:51.10:0,51,605	1/1:4,12:20:23.74:363,24,0	0/0:22,0:22:46.39:0,46,569	0/0:26,0:26:39.29:0,39,549	0/0:19,0:19:42.08:0,42,532	0/0:29,0:29:77.75:0,78,896	0/0:16,0:16:12.01:0,12,337	0/0:24,0:24:48.88:0,49,615	0/1:12,0:12:6.45:6,0,266	0/0:27,0:27:65.06:0,65,1155	0/0:21,0:22:55.38:0,55,737	0/0:15,0:15:18.63:0,19,402	0/0:26,0:26:68.73:0,69,801	0/0:12,0:11:18.04:0,18,229	0/0:27,0:27:78.19:0,78,1162	0/0:17,0:17:51.17:0,51,805	0/0:16,0:16:45.14:0,45,707	0/0:20,0:22:51.64:0,52,630	0/0:19,0:21:24.11:0,24,608	0/0:27,0:27:52.39:0,52,740	0/0:8,0:8:12.38:0,12,142
chr10	79145401	.	AC	A	4740.94	PASS	AB=0.981;AC=38;AF=0.679;AN=56;BaseQRankSum=8.844;DP=562;FS=8.754;HRun=1;HaplotypeScore=108.1533;InbreedingCoeff=0.7476;MQ=63.93;MQ0=0;MQRankSum=1.228;QD=11.94;ReadPosRankSum=-9.563;VQSLOD=-0.3868;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:25,1:26:11.56:139,0,12	1/1:4,0:4:11.38:70,11,0	0/0:17,0:10:12.62:0,13,192	0/0:15,0:13:22.94:0,23,191	1/1:23,1:24:51.04:362,51,0	0/0:28,0:28:84.22:0,84,1063	0/0:18,0:18:54.12:0,54,680	1/1:23,0:22:34.41:317,34,0	1/1:14,0:14:22.61:115,23,0	1/1:22,1:23:40.79:346,41,0	1/1:21,3:24:52:391,52,0	1/1:19,0:19:7.69:98,8,0	1/1:25,0:25:3.46:189,3,0	1/1:13,1:14:3.98:104,4,0	1/1:23,1:24:59.20:440,59,0	1/1:13,0:13:25.84:141,26,0	0/0:27,0:27:81.18:0,81,1001	0/1:21,0:21:16.27:89,0,16	1/1:14,1:15:36.13:238,36,0	1/1:26,3:29:73.03:609,73,0	1/1:12,2:13:17.26:170,17,0	0/0:27,0:27:75.17:0,75,929	0/0:17,0:17:51.15:0,51,657	0/0:16,0:16:45.13:0,45,581	1/1:23,0:23:3.75:191,4,0	1/1:25,0:25:17.97:287,18,0	1/1:28,0:28:51.74:302,52,0	1/1:8,1:9:12.30:143,12,0
chr10	79145409	.	C	CCA	855.52	PASS	AB=0.965;AC=12;AF=0.214;AN=56;BaseQRankSum=9.524;DP=562;FS=0.399;HRun=0;HaplotypeScore=135.3004;InbreedingCoeff=-0.0224;MQ=65.17;MQ0=0;MQRankSum=-0.535;QD=3.80;ReadPosRankSum=-6.712;VQSLOD=0.3008;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:63.27:0,63,992	0/1:3,0:3:1.68:2,0,10	0/0:21,0:14:35.05:0,35,406	0/0:17,0:15:5.93:0,6,233	0/1:29,0:30:63.31:127,0,63	0/0:25,0:25:75.25:0,75,1185	0/0:21,0:21:60.12:0,60,915	1/1:19,3:23:19.28:233,19,0	0/0:15,0:15:24.64:0,25,308	0/1:22,0:22:66.06:66,0,99	0/1:21,3:24:47.07:165,0,47	0/0:18,0:18:54.10:0,54,772	0/0:22,0:22:66.16:0,66,945	0/0:12,0:12:36.07:0,36,496	0/1:26,0:26:46.79:101,0,47	0/1:12,0:13:15.97:16,0,71	0/0:26,0:26:78.18:0,78,1184	0/0:21,0:21:54.48:0,54,839	0/1:16,0:17:45.29:45,0,50	0/1:22,1:23:39.69:127,0,40	0/1:14,0:13:8.37:61,0,8	0/0:26,0:26:75.20:0,75,1162	0/0:17,0:17:48.15:0,48,747	0/0:17,0:17:48.15:0,48,755	0/0:23,0:23:65.89:0,66,924	0/0:21,0:21:63.15:0,63,840	0/1:28,1:29:65.17:65,0,112	0/0:9,0:9:24.08:0,24,375
chr10	79145618	.	TCA	T	255.08	PASS	AB=0.958;AC=24;AF=0.522;AN=46;BaseQRankSum=4.270;DP=407;FS=0.000;HRun=0;HaplotypeScore=61.4004;InbreedingCoeff=0.3061;MQ=54.33;MQ0=59;MQRankSum=-3.417;QD=1.22;ReadPosRankSum=-0.277;VQSLOD=1.2688;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:16:0:0,0,0	1/1:5,0:3:2.84:14,3,0	./.	./.	./.	0/0:16,0:16:5.99:0,6,50	0/1:20,2:20:48.57:49,0,95	0/0:27,0:19:1.25:0,1,3	1/1:12,0:12:8.52:42,9,0	1/1:14,0:8:2.80:13,3,0	./.	0/0:21,0:20:22.15:0,22,162	0/0:8,0:6:4.23:0,4,26	0/0:8,0:6:2.50:0,2,9	1/1:13,0:13:14.12:67,14,0	1/1:12,0:10:5.37:28,5,0	0/1:19,1:20:19.33:19,0,93	0/0:7,0:7:11.64:0,12,67	1/1:14,0:13:2.84:14,3,0	1/1:13,0:6:2.84:14,3,0	1/1:12,0:9:5.68:28,6,0	0/0:14,0:14:6.02:0,6,85	0/0:14,0:14:3.01:0,3,41	0/1:26,1:27:10.75:11,0,213	0/1:14,0:12:4.85:19,0,5	1/1:11,0:10:8.48:41,8,0	1/1:20,0:16:8.52:42,9,0	./.
chr10	79145620	.	A	ACAC	1414.09	PASS	AB=1.000;AC=21;AF=0.389;AN=54;BaseQRankSum=3.417;DP=414;FS=30.964;HRun=0;HaplotypeScore=76.0398;InbreedingCoeff=0.5871;MQ=52.24;MQ0=62;MQRankSum=0.957;QD=8.32;ReadPosRankSum=-2.514;VQSLOD=0.5341;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:15:14.28:251,0,14	0/0:5,0:3:0:0,0,0	0/0:17,0:12:30.09:0,30,371	0/0:12,0:7:20.65:0,21,239	1/1:9,0:4:9.03:120,9,0	0/0:17,0:17:42.13:0,42,534	0/0:22,0:20:57.18:0,57,731	1/1:24,0:16:26.46:343,26,0	0/0:12,0:12:5.45:0,5,15	1/1:16,0:10:1.40:36,1,0	0/1:16,0:8:0:0,0,0	1/1:22,0:21:21.56:149,22,0	1/1:8,0:6:6.19:89,6,0	1/1:3,4:6:3.01:67,3,0	0/0:12,0:12:8.04:0,8,21	0/0:12,0:10:3.37:0,3,9	0/0:23,0:22:14.82:0,15,426	0/1:8,0:8:1.62:49,0,2	1/1:13,0:12:18.67:258,19,0	1/1:14,0:6:6.16:116,6,0	0/0:13,0:10:2.03:0,2,5	0/0:19,0:19:30.10:0,30,405	0/0:16,0:16:42.12:0,42,519	0/0:27,0:27:63.20:0,63,852	0/0:13,0:11:6.62:0,7,32	1/1:11,0:10:0.19:106,0,0	0/0:18,0:14:4.93:0,5,14	./.
chr10	79145623	.	CACA	C	2197.10	PASS	AB=0.679;AC=27;AF=0.500;AN=54;BaseQRankSum=7.185;DP=414;FS=24.685;HRun=0;HaplotypeScore=57.7438;InbreedingCoeff=0.5651;MQ=49.14;MQ0=66;MQRankSum=-0.286;QD=10.41;ReadPosRankSum=-0.039;VQSLOD=1.2865;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:15:15.05:223,0,15	1/1:1,3:3:3.01:56,3,0	0/0:15,0:10:30.09:0,30,371	0/0:12,0:7:20.65:0,21,239	1/1:2,0:4:9.03:120,9,0	0/0:17,0:17:45.15:0,45,656	0/0:23,0:21:59.98:0,60,830	0/1:22,0:14:24.85:246,0,25	1/1:1,0:12:9.01:111,9,0	1/1:4,8:8:12.04:174,12,0	0/1:5,0:7:0:0,0,0	0/0:21,0:21:10.82:0,11,195	0/1:3,0:4:17.83:70,0,18	0/0:8,0:7:6.01:0,6,67	1/1:3,10:12:15.05:277,15,0	1/1:1,9:10:5.88:93,6,0	0/0:23,0:22:48.84:0,49,642	0/0:8,0:9:14.90:0,15,160	1/1:2,10:11:17.95:277,18,0	1/1:4,0:6:12.04:157,12,0	1/1:5,7:10:6.02:110,6,0	0/0:21,0:21:51.17:0,51,789	0/0:16,0:16:45.13:0,45,604	0/0:30,0:30:72.13:0,72,1131	0/1:2,0:10:25.60:64,0,26	1/1:2,1:10:16.34:247,16,0	1/1:3,13:13:9.03:167,9,0	./.
chr10	79146226	.	AGAGTGTCTCT	A	1442.40	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.747;DP=430;FS=3.663;HRun=0;HaplotypeScore=129.5350;InbreedingCoeff=0.9154;MQ=95.50;MQ0=0;MQRankSum=-6.507;QD=96.16;ReadPosRankSum=2.873;VQSLOD=4.1524;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.32:0,93,5009	0/0:3,0:3:9.03:0,9,459	0/0:22,0:22:66.23:0,66,3198	0/0:21,0:21:63.21:0,63,2914	0/0:6,0:6:18.06:0,18,872	0/0:11,0:11:30.10:0,30,1601	0/0:24,0:24:72.25:0,72,3826	0/0:35,0:35:99:0,105,5438	1/1:0,15:15:45.15:1537,45,0	0/0:9,0:9:27.09:0,27,1402	0/0:8,0:8:21.07:0,21,1144	0/0:16,0:16:48.12:0,48,2271	0/0:10,0:10:30.10:0,30,1502	0/0:16,0:16:44.77:0,45,2413	0/0:16,0:16:48.16:0,48,2543	0/0:18,0:18:51.18:0,51,2706	0/0:9,0:9:27.09:0,27,1390	0/0:9,0:9:27.07:0,27,1188	0/0:22,0:22:66.23:0,66,3142	0/0:12,0:12:36.12:0,36,1979	0/0:15,0:15:42.14:0,42,2259	0/0:12,0:12:36.12:0,36,1958	0/0:8,0:8:24.07:0,24,1067	0/0:24,0:24:72.25:0,72,3872	0/0:14,0:14:42.14:0,42,2307	0/0:18,0:18:51.18:0,51,2709	0/0:21,0:21:63.22:0,63,3395	0/0:5,0:5:15.05:0,15,749
chr10	79147987	.	G	GT	22871.44	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=10.019;DP=722;FS=4.168;HRun=1;HaplotypeScore=115.5993;InbreedingCoeff=0.9971;MQ=78.61;MQ0=1;MQRankSum=-3.626;QD=42.91;ReadPosRankSum=1.602;VQSLOD=4.3603;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,45:45:99:2005,126,0	1/1:2,11:13:33.11:527,33,0	0/0:9,0:9:15.85:0,16,252	0/0:21,0:22:24.51:0,25,540	1/1:0,20:20:51.17:815,51,0	0/0:20,0:20:60.20:0,60,839	0/0:33,0:33:99:0,99,1385	1/1:0,22:22:63.17:954,63,0	1/1:0,32:32:93.32:1487,93,0	1/1:2,26:28:72.25:1148,72,0	1/1:1,12:14:39.13:613,39,0	1/1:1,30:31:75.26:1199,75,0	1/1:0,19:19:45.15:719,45,0	1/1:0,30:30:84.29:1343,84,0	1/1:0,26:26:63.21:1007,63,0	1/1:1,21:22:54.18:863,54,0	0/0:37,0:37:99:0,111,1526	1/1:0,21:21:51.17:815,51,0	1/1:0,33:33:99:1578,99,0	1/1:1,19:20:51.17:815,51,0	1/1:1,84:84:99:3597,226,0	0/0:17,0:17:51.15:0,51,680	0/0:16,0:16:42.14:0,42,586	0/0:35,0:35:99:0,105,1445	1/1:0,19:19:54.18:862,54,0	1/1:2,24:26:78.26:1227,78,0	1/1:0,19:19:57.19:911,57,0	1/1:0,8:8:24.08:384,24,0
chr10	79149543	.	CAATGGCGATATCATAGCATAT	C	21657.35	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=17.470;DP=607;FS=0.732;HRun=0;HaplotypeScore=359.9363;InbreedingCoeff=0.9895;MQ=88.88;MQ0=0;MQRankSum=-14.692;QD=111.06;ReadPosRankSum=2.099;VQSLOD=3.8227;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:86.88:0,87,7352	1/1:0,8:8:18.06:1089,18,0	0/0:33,0:33:96.33:0,96,6682	0/0:18,0:18:45.47:0,45,3001	1/1:0,17:17:30.10:1815,30,0	0/0:18,0:18:54.19:0,54,4408	0/0:28,0:28:84.29:0,84,6869	1/1:0,21:21:62.75:2094,63,0	0/0:24,0:24:72.23:0,72,5836	1/1:0,17:17:41.19:1615,41,0	1/1:0,17:17:21.07:1271,21,0	0/0:34,0:34:99:0,102,9149	0/0:31,0:31:93.32:0,93,7869	0/0:24,0:24:72.23:0,72,5576	1/1:0,25:25:57.20:3448,57,0	1/1:0,29:29:63.22:3812,63,0	0/0:25,0:25:75.26:0,75,6758	0/0:15,0:15:42.14:0,42,3678	1/1:0,8:8:23.97:973,24,0	1/1:0,17:17:42.06:2093,42,0	1/1:0,15:15:9.03:543,9,0	0/0:19,0:19:57.20:0,57,4910	0/0:19,0:19:57.20:0,57,4797	0/0:30,0:30:90.29:0,90,8075	0/0:25,0:25:75.26:0,75,6294	0/0:26,0:26:78.27:0,78,6906	1/1:0,21:21:48.16:2904,48,0	0/0:14,0:14:42.14:0,42,3870
chr10	79150963	.	G	GCACA	4825.86	PASS	AB=0.703;AC=30;AF=0.556;AN=54;BaseQRankSum=-2.092;DP=770;FS=10.160;HRun=0;HaplotypeScore=144.4068;InbreedingCoeff=0.4224;MQ=63.23;MQ0=15;MQRankSum=0.706;QD=9.73;ReadPosRankSum=-1.399;VQSLOD=3.4071;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,19:44:35.23:569,35,0	1/1:2,1:9:8.49:49,8,0	1/1:37,0:16:1.82:5,2,0	./.	0/1:14,7:28:26.97:249,0,27	0/0:27,0:29:10.09:0,10,322	0/0:25,0:27:1.48:0,1,440	1/1:21,0:21:11.83:78,12,0	0/0:11,0:25:9.01:0,9,84	1/1:11,12:24:40.62:535,41,0	1/1:17,1:21:33.50:373,33,0	0/1:14,0:28:63.90:64,0,154	0/1:19,0:24:32.51:33,0,150	0/1:18,0:28:44.89:45,0,159	1/1:15,19:39:44.36:872,44,0	1/1:15,13:36:37.81:603,38,0	0/0:27,0:31:38.13:0,38,723	1/1:2,0:14:3.01:52,3,0	1/1:6,3:11:14.70:184,15,0	1/1:18,4:26:8.96:197,9,0	0/1:30,17:50:53.65:205,0,54	0/0:22,0:24:35.89:0,36,480	0/0:13,0:17:33.01:0,33,453	0/0:47,0:51:74.93:0,75,1009	0/1:11,14:29:28.51:335,0,29	0/0:13,0:17:12.01:0,12,112	1/1:10,9:22:20.54:379,21,0	0/0:7,0:11:12.01:0,12,112
chr10	79152615	.	GT	G	516.67	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.140;DP=605;FS=0.000;HRun=4;HaplotypeScore=56.2127;InbreedingCoeff=0.9975;MQ=83.67;MQ0=0;MQRankSum=0.536;QD=25.83;ReadPosRankSum=2.937;VQSLOD=2.3747;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.20:0,69,926	0/0:13,0:13:36.12:0,36,498	0/0:20,0:20:57.19:0,57,779	0/0:19,0:19:48.15:0,48,650	0/0:25,0:25:69.22:0,69,941	0/0:14,0:13:39.13:0,39,546	0/0:17,0:17:48.16:0,48,672	0/0:41,0:41:99:0,117,1618	1/1:0,20:20:51.16:612,51,0	0/0:31,0:31:90.26:0,90,1235	0/0:23,0:23:66.11:0,66,847	0/0:21,0:21:60.19:0,60,824	0/0:21,0:21:63.18:0,63,847	0/0:17,0:17:51.17:0,51,713	0/0:20,0:20:60.19:0,60,823	0/0:17,0:17:51.15:0,51,696	0/0:28,0:28:78.24:0,78,1064	0/0:17,0:17:48.06:0,48,609	0/0:22,0:22:54.17:0,54,741	0/0:26,0:26:75.14:0,75,965	0/0:15,0:15:42.12:0,42,570	0/0:23,0:23:66.22:0,66,920	0/0:24,0:24:72.23:0,72,990	0/0:11,0:11:33.10:0,33,446	0/0:29,0:29:81.25:0,81,1099	0/0:26,0:26:75.25:0,75,1050	0/0:33,0:33:99:0,99,1340	0/0:8,0:8:24.08:0,24,335
chr10	79152895	.	T	TAACCAACCAAGCAAAC	13209.88	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=0.465;DP=798;FS=0.597;HRun=0;HaplotypeScore=332.6580;InbreedingCoeff=0.6149;MQ=53.48;MQ0=4;MQRankSum=-7.267;QD=26.53;ReadPosRankSum=-2.696;VQSLOD=2.6032;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:53,0:53:99:510,0,2172	1/1:1,8:14:9.03:335,9,0	0/0:39,0:27:72.04:0,72,1369	0/0:31,0:24:51.28:0,51,1253	1/1:32,0:31:83.08:1269,83,0	0/0:23,0:23:63.19:0,63,1763	0/0:21,0:21:60.17:0,60,1578	1/1:42,0:41:99:1607,105,0	0/0:36,0:36:50.16:0,50,2828	1/1:0,31:38:88.53:1857,89,0	1/1:25,0:25:68.71:1203,69,0	0/1:20,0:20:99:118,0,984	0/1:28,0:28:99:149,0,1424	0/1:22,0:22:99:297,0,762	1/1:2,24:32:9.03:324,9,0	1/1:40,0:40:99:1991,116,0	0/0:29,0:29:78.11:0,78,2316	0/0:15,0:15:36.12:0,36,1136	1/1:25,0:23:65.52:1110,66,0	1/1:31,0:31:86.28:1165,86,0	1/1:32,0:32:29.04:835,29,0	0/0:19,0:19:54.12:0,54,1544	0/0:18,0:18:48.16:0,48,1508	0/0:29,0:29:81.22:0,81,2470	0/1:21,0:21:99:173,0,1021	0/0:27,0:27:78.24:0,78,2869	1/1:0,33:43:7.37:267,7,0	0/0:12,0:12:36.12:0,36,1053
chr10	79153661	.	TA	T	2058.38	PASS	AC=32;AF=0.593;AN=54;BaseQRankSum=10.840;DP=241;FS=10.849;HRun=3;HaplotypeScore=44.8418;InbreedingCoeff=0.8131;MQ=67.59;MQ0=2;MQRankSum=-7.873;QD=16.47;ReadPosRankSum=-1.868;VQSLOD=1.7629;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:9.01:90,9,0	1/1:2,0:2:6.01:62,6,0	0/0:8,0:8:24.06:0,24,316	0/0:4,0:4:12.01:0,12,147	1/1:6,1:7:18.01:167,18,0	0/0:8,0:8:21.07:0,21,294	0/0:3,0:3:9.03:0,9,126	1/1:25,0:22:56.44:465,56,0	0/0:7,0:6:12.03:0,12,57	1/1:10,1:11:33:297,33,0	1/1:2,3:4:8.54:50,9,0	1/1:7,2:9:8.99:82,9,0	1/1:3,0:3:3:28,3,0	1/1:4,0:4:6.01:58,6,0	1/1:2,0:2:6.01:57,6,0	1/1:6,1:7:12:107,12,0	0/0:33,0:33:86.73:0,87,1147	0/0:23,0:23:52.43:0,52,734	1/1:15,1:16:44.85:401,45,0	1/1:2,0:2:3:28,3,0	1/1:5,0:5:6.01:58,6,0	0/0:6,0:6:15.05:0,15,209	0/0:2,0:2:6.02:0,6,84	./.	1/1:9,2:11:24.02:229,24,0	0/0:9,0:9:24.05:0,24,303	1/1:4,0:4:9.01:83,9,0	0/0:13,0:13:39.13:0,39,543
chr10	79153662	.	AAAGAT	A	5358.13	PASS	AB=1.000;AC=33;AF=0.611;AN=54;BaseQRankSum=9.533;DP=236;FS=12.068;HRun=0;HaplotypeScore=50.9497;InbreedingCoeff=0.7409;MQ=67.83;MQ0=2;MQRankSum=-7.774;QD=41.54;ReadPosRankSum=-1.380;VQSLOD=3.2678;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:12:9.03:186,9,0	1/1:0,2:2:6.02:131,6,0	0/0:8,0:8:24.08:0,24,667	0/0:4,0:4:12.01:0,12,272	1/1:1,6:7:18.06:393,18,0	0/0:8,0:8:21.07:0,21,666	0/0:3,0:3:9.03:0,9,230	1/1:4,21:22:57.15:1098,57,0	0/1:7,0:6:26.47:61,0,26	1/1:1,10:11:33.11:699,33,0	1/1:5,0:4:9.03:181,9,0	1/1:3,4:7:9.03:178,9,0	1/1:1,2:3:3.01:66,3,0	1/1:0,4:4:6.02:132,6,0	1/1:0,2:2:6.02:132,6,0	1/1:3,4:7:12.04:262,12,0	0/0:33,0:33:87.26:0,87,2465	0/0:22,0:22:37.88:0,38,1800	1/1:1,14:15:45.15:925,45,0	1/1:1,1:2:3.01:66,3,0	1/1:0,5:5:6.02:132,6,0	0/0:5,0:5:15.05:0,15,354	0/0:2,0:2:6.02:0,6,182	./.	1/1:2,9:11:24.08:516,24,0	0/0:8,0:8:24.07:0,24,666	1/1:0,4:4:9.03:199,9,0	0/0:14,0:14:42.14:0,42,1211
chr10	79153665	.	GATAGATTTATTT	G	2868.62	PASS	AC=34;AF=0.630;AN=54;BaseQRankSum=10.798;DP=217;FS=16.491;HRun=0;HaplotypeScore=83.9419;InbreedingCoeff=0.7803;MQ=66.79;MQ0=3;MQRankSum=-8.424;QD=23.32;ReadPosRankSum=-0.994;VQSLOD=0.6168;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:8.91:75,9,0	1/1:2,0:2:6.01:57,6,0	0/0:8,0:8:23.83:0,24,367	0/0:3,0:3:9.03:0,9,128	1/1:6,1:7:18.04:283,18,0	0/0:7,0:7:21.07:0,21,1017	0/0:3,0:3:6.02:0,6,224	1/1:26,0:20:42.07:428,42,0	1/1:6,0:5:5.89:67,6,0	1/1:10,1:11:30.06:406,30,0	1/1:2,2:3:9.03:213,9,0	1/1:4,0:6:8.92:185,9,0	1/1:2,0:2:3:29,3,0	1/1:4,0:4:6.01:68,6,0	1/1:2,0:2:6.01:59,6,0	1/1:4,1:5:12.02:189,12,0	0/0:26,0:26:65.14:0,65,3077	0/0:22,0:22:43.83:0,44,2398	1/1:14,1:15:39.06:485,39,0	1/1:1,0:1:3:29,3,0	1/1:5,0:5:6.01:59,6,0	0/0:3,0:3:9.03:0,9,149	0/0:2,0:2:6.02:0,6,100	./.	1/1:9,0:11:24.06:347,24,0	0/0:7,0:7:21.06:0,21,734	1/1:4,0:4:9.02:88,9,0	0/0:13,0:13:39.13:0,39,1102
chr10	79153773	.	G	GCGCT	1800.97	PASS	AB=1.000;AC=27;AF=0.540;AN=50;BaseQRankSum=5.769;DP=213;FS=0.791;HRun=0;HaplotypeScore=41.8091;InbreedingCoeff=0.7361;MQ=48.23;MQ0=13;MQRankSum=-5.286;QD=25.01;ReadPosRankSum=-5.627;VQSLOD=1.5516;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,2:9:12.04:329,12,0	1/1:2,0:2:3.01:77,3,0	0/0:12,0:2:2.67:0,3,57	0/0:13,0:5:14.54:0,15,230	1/1:3,1:4:3.01:71,3,0	0/0:9,0:9:27.09:0,27,539	0/0:16,0:16:48.16:0,48,956	1/1:14,0:13:5.96:43,6,0	1/1:2,2:3:3.01:49,3,0	1/1:3,2:4:6.02:112,6,0	./.	1/1:2,1:3:9.03:246,9,0	1/1:1,1:2:5.98:102,6,0	1/1:2,1:3:6.02:130,6,0	1/1:1,2:3:3.01:70,3,0	./.	0/0:30,0:30:87.30:0,87,1737	0/0:15,0:15:45.13:0,45,845	./.	1/1:5,1:6:9.01:176,9,0	0/1:2,0:2:0:0,0,0	0/0:6,0:6:18.06:0,18,359	0/0:9,0:9:27.09:0,27,539	0/0:8,0:8:18.06:0,18,339	1/1:6,1:7:9.03:175,9,0	0/0:9,0:9:27.09:0,27,539	1/1:6,2:7:21.06:401,21,0	0/0:9,0:9:27.09:0,27,537
chr10	79154260	.	T	TA	741.97	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.450;DP=699;FS=0.697;HRun=9;HaplotypeScore=64.5346;InbreedingCoeff=0.9528;MQ=74.77;MQ0=0;MQRankSum=-2.675;QD=25.59;ReadPosRankSum=-1.629;VQSLOD=3.6429;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,141,1220	0/0:7,0:7:14.99:0,15,130	0/0:18,0:18:35.89:0,36,303	0/0:20,0:20:29.93:0,30,254	0/0:26,0:26:50.29:0,50,522	0/0:29,0:29:77.98:0,78,677	0/0:22,0:22:56.97:0,57,491	0/0:30,0:30:71.95:0,72,623	0/0:25,0:25:68.98:0,69,599	0/0:32,0:33:92.01:0,92,787	0/0:22,0:22:53.98:0,54,469	0/0:24,0:24:71.99:0,72,625	0/0:28,0:28:62.94:0,63,543	0/0:26,0:26:62.95:0,63,543	0/0:28,0:27:77.98:0,78,677	0/0:22,0:21:56.95:0,57,488	0/0:27,0:27:71.98:0,72,625	0/0:14,0:14:38.99:0,39,339	0/0:18,1:19:8.80:0,9,305	0/0:46,0:46:99:0,123,1060	0/0:28,0:28:71.93:0,72,616	0/0:22,0:22:50.98:0,51,443	0/0:23,0:23:65.99:0,66,572	0/0:30,0:30:86.98:0,87,755	0/0:25,0:25:65.94:0,66,566	1/1:1,23:24:43.20:694,43,0	0/0:23,1:24:29.80:0,30,488	1/1:0,5:5:15.04:166,15,0
chr10	79155381	.	ATGTGTGTG	A	4618.02	PASS	AB=0.595;AC=25;AF=0.500;AN=50;BaseQRankSum=6.091;DP=537;FS=0.000;HRun=0;HaplotypeScore=147.8299;InbreedingCoeff=0.8025;MQ=62.65;MQ0=11;MQRankSum=-9.694;QD=18.04;ReadPosRankSum=2.111;VQSLOD=4.1692;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:19:5.86:32,6,0	1/1:2,4:6:6.02:148,6,0	./.	./.	1/1:11,9:20:5.89:150,6,0	0/0:26,0:26:42.13:0,42,1495	0/0:10,0:17:24.08:0,24,809	1/1:31,0:31:5.15:97,5,0	1/1:14,0:18:12.04:224,12,0	1/1:13,11:24:32.47:733,32,0	1/1:11,6:18:6.02:131,6,0	0/0:8,0:8:9.03:0,9,194	0/0:12,0:12:18.06:0,18,673	0/0:19,0:19:39.13:0,39,1404	1/1:9,13:22:21.07:527,21,0	1/1:3,10:13:24.08:602,24,0	0/0:21,0:22:25.90:0,26,924	0/0:16,0:15:5.64:0,6,127	1/1:15,4:19:12.04:300,12,0	1/1:9,11:20:24.08:602,24,0	./.	0/0:15,0:15:18.03:0,18,695	0/0:18,0:18:30.09:0,30,1040	0/0:24,0:23:42.14:0,42,1592	0/1:7,0:21:9.26:49,0,9	0/0:19,0:19:33.04:0,33,727	1/1:10,13:23:42.14:1023,42,0	0/0:9,0:9:15.01:0,15,326
chr10	79155415	.	G	GTGTGTGTA	1325.05	PASS	AB=0.596;AC=5;AF=0.089;AN=56;BaseQRankSum=-1.744;DP=464;FS=13.976;HRun=0;HaplotypeScore=149.7848;InbreedingCoeff=0.6258;MQ=49.04;MQ0=17;MQRankSum=0.105;QD=24.09;ReadPosRankSum=-0.405;VQSLOD=2.6272;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:23.93:0,24,245	0/0:7,0:7:12.85:0,13,97	0/0:18,0:9:17.22:0,17,223	0/0:14,0:4:9.02:0,9,92	0/0:15,0:15:18:0,18,220	0/0:23,0:23:51.04:0,51,866	0/0:16,0:16:26.94:0,27,218	0/0:24,0:23:51:0,51,448	0/0:12,0:12:24.01:0,24,336	0/0:20,0:20:51.08:0,51,714	0/0:16,0:16:23.85:0,24,256	0/0:11,0:11:13.74:0,14,231	0/0:8,0:8:21.05:0,21,419	0/0:14,0:14:26.86:0,27,766	0/0:21,0:21:38.93:0,39,526	0/0:13,0:13:33.05:0,33,521	0/0:20,0:20:47.69:0,48,691	1/1:13,0:11:5.30:236,5,0	0/0:13,0:12:32.87:0,33,455	0/0:18,0:18:33.07:0,33,540	0/0:10,0:9:3.01:0,3,51	0/0:9,0:9:15.51:0,16,306	0/0:17,0:17:38.89:0,39,707	0/0:23,0:22:52.76:0,53,1029	0/0:18,0:17:21.04:0,21,323	0/1:9,15:28:8.06:817,0,8	0/0:26,0:26:72.01:0,72,1001	1/1:5,8:12:9.03:384,9,0
chr10	79155627	.	AC	A	12496.01	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=11.524;DP=606;FS=1.453;HRun=4;HaplotypeScore=66.0354;InbreedingCoeff=0.9732;MQ=75.27;MQ0=0;MQRankSum=-0.667;QD=30.93;ReadPosRankSum=3.006;VQSLOD=5.4009;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:72.22:863,72,0	1/1:0,4:4:3.01:36,3,0	0/0:22,0:22:45.61:0,46,789	0/0:19,0:19:24.16:0,24,556	1/1:0,23:23:69.14:809,69,0	0/0:24,0:24:66.20:0,66,905	0/0:25,0:25:63.19:0,63,864	1/1:1,29:30:84.23:985,84,0	1/1:2,20:22:54.16:638,54,0	1/1:0,28:28:81.25:972,81,0	1/1:0,26:26:75.23:899,75,0	1/1:0,16:16:39.12:467,39,0	1/1:0,10:10:27.08:324,27,0	1/1:0,16:16:39.12:468,39,0	1/1:2,19:21:51.15:605,51,0	1/1:0,24:24:63.19:755,63,0	0/0:21,0:21:63.21:0,63,880	1/1:3,14:17:39.08:451,39,0	1/1:5,21:25:63.10:714,63,0	1/1:0,33:33:96:1064,96,0	1/1:1,27:28:75.23:899,75,0	0/0:15,0:15:45.15:0,45,623	0/0:21,0:21:60.20:0,60,840	0/0:20,0:20:57.17:0,57,779	1/1:1,17:18:48.15:576,48,0	0/0:28,0:28:84.27:0,84,1159	1/1:2,31:33:81.25:970,81,0	0/0:7,0:7:21.02:0,21,240
chr10	79156351	.	AGTGT	A	3841.31	PASS	AB=0.801;AC=30;AF=0.577;AN=52;BaseQRankSum=-0.796;DP=698;FS=1.908;HRun=0;HaplotypeScore=130.7791;InbreedingCoeff=0.4599;MQ=63.65;MQ0=27;MQRankSum=-0.101;QD=8.16;ReadPosRankSum=2.695;VQSLOD=2.7935;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:36,5:41:29.97:412,30,0	1/1:10,0:11:15.03:172,15,0	./.	./.	1/1:15,19:33:33.07:470,33,0	0/0:12,0:22:11.24:0,11,108	0/0:26,0:25:24.07:0,24,514	0/1:26,0:24:12.81:67,0,13	1/1:13,0:19:15.49:141,15,0	1/1:12,12:24:20.43:411,20,0	1/1:15,13:28:35.28:472,35,0	0/0:16,0:16:12.04:0,12,240	0/0:16,0:23:18.03:0,18,224	0/0:16,0:15:20.64:0,21,333	1/1:17,13:29:15:235,15,0	1/1:11,5:18:12.03:150,12,0	0/1:21,3:36:99:107,0,135	0/0:18,0:19:24.04:0,24,364	1/1:18,1:19:9.03:132,9,0	1/1:17,14:32:24.87:461,25,0	0/1:17,0:18:42.66:43,0,48	0/1:15,1:23:30.25:30,0,44	0/0:18,0:28:7.86:0,8,36	0/1:14,2:26:62.79:63,0,102	1/1:16,14:30:15.05:227,15,0	0/1:15,0:21:28.19:28,0,50	1/1:18,8:26:11.33:219,11,0	0/0:4,0:6:5.54:0,6,25
chr10	79158677	.	TG	T	2152.71	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.780;DP=720;FS=1.068;HRun=1;HaplotypeScore=72.0772;InbreedingCoeff=0.9994;MQ=88.81;MQ0=0;MQRankSum=-2.176;QD=32.13;ReadPosRankSum=1.410;VQSLOD=3.3865;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,156,2393	0/0:17,0:17:51.15:0,51,789	0/0:25,0:25:65.37:0,65,1046	0/0:26,0:26:59.26:0,59,889	0/0:21,0:21:63.20:0,63,983	0/0:24,0:24:72.23:0,72,1128	0/0:22,0:22:66.23:0,66,1053	0/0:35,0:35:99:0,99,1541	0/0:19,0:19:57.18:0,57,885	0/0:39,0:39:99:0,111,1728	0/0:20,0:20:60.19:0,60,935	1/1:0,21:21:60.20:838,60,0	1/1:1,27:28:66.22:916,66,0	1/1:0,18:18:39.13:542,39,0	0/0:35,0:35:99:0,102,1630	0/0:32,0:32:96.30:0,96,1489	0/0:32,0:32:96.33:0,96,1534	0/0:10,0:10:30.10:0,30,479	0/0:24,0:24:69.24:0,69,1097	0/0:31,0:31:93.25:0,93,1390	0/0:19,0:19:57.19:0,57,911	0/0:32,0:32:96.31:0,96,1507	0/0:25,0:25:75.26:0,75,1195	0/0:21,0:21:63.21:0,63,1007	0/0:33,0:32:99:0,99,1511	0/0:25,0:25:75.25:0,75,1179	0/0:25,0:24:75.24:0,75,1174	0/0:9,0:9:27.09:0,27,431
chr10	79160205	.	CTG	C	526.21	PASS	AB=0.949;AC=29;AF=0.604;AN=48;BaseQRankSum=3.727;DP=622;FS=0.858;HRun=0;HaplotypeScore=120.4696;InbreedingCoeff=-0.0007;MQ=64.31;MQ0=23;MQRankSum=-2.657;QD=1.24;ReadPosRankSum=1.069;VQSLOD=2.2305;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:25:1.75:2,0,52	0/1:9,0:9:29.05:54,0,29	./.	./.	0/0:16,0:15:0:0,0,0	0/1:11,2:14:20.71:21,0,101	0/1:23,1:25:8.74:9,0,221	./.	0/0:28,0:25:14.30:0,14,99	0/1:40,0:39:6.97:7,0,36	1/1:9,0:9:4.56:35,5,0	1/1:21,0:21:5.59:26,6,0	1/1:23,0:22:2.86:26,3,0	1/1:14,0:14:6.86:38,7,0	1/1:28,0:26:0.02:19,0,0	1/1:18,0:17:5.47:25,5,0	0/1:29,7:37:99:152,0,217	0/0:19,0:17:15.75:0,16,134	1/1:21,0:17:5.60:27,6,0	1/1:14,0:14:3:32,3,0	0/1:52,0:51:37.64:53,0,38	0/0:12,0:12:3.01:0,3,45	0/0:12,0:11:9.03:0,9,119	0/1:26,4:29:77.18:77,0,381	1/1:10,0:10:1.55:4,2,0	1/1:17,0:23:8.14:39,8,0	0/1:10,0:10:22.51:23,0,38	./.
chr10	79160237	.	GTGTGTGTGTGT	G	1912.28	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=4.241;DP=624;FS=67.772;HRun=0;HaplotypeScore=177.0323;InbreedingCoeff=-0.0251;MQ=42.96;MQ0=75;MQRankSum=-3.128;QD=5.73;ReadPosRankSum=0.519;VQSLOD=0.3269;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:19:99:128,0,140	0/1:9,0:9:34.29:34,0,135	0/0:34,0:12:27.09:0,27,389	0/0:48,0:19:41.09:0,41,557	0/0:23,0:21:5.86:0,6,91	0/0:17,0:17:36.08:0,36,797	0/0:20,0:20:45.04:0,45,1334	0/1:27,0:17:99:212,0,106	0/1:28,0:21:11.32:11,0,640	0/1:26,0:21:66.70:67,0,166	0/1:8,0:8:30.93:48,0,31	1/1:24,0:18:20.66:317,21,0	1/1:19,1:14:26.87:445,27,0	1/1:11,3:10:21.07:482,21,0	0/1:23,0:17:37.61:39,0,38	0/1:17,0:11:1.32:1,0,34	0/0:46,0:46:75.49:0,75,2247	0/0:16,0:15:33.99:0,34,823	0/1:10,0:6:20.57:76,0,21	0/1:17,0:15:28.57:41,0,29	0/1:57,0:39:28.40:28,0,107	0/0:10,0:10:15.05:0,15,431	0/0:15,0:14:24.08:0,24,546	0/0:39,0:38:64.31:0,64,2672	0/1:14,0:9:64.52:70,0,65	0/0:16,0:16:15.82:0,16,311	0/1:13,0:8:87.88:88,0,97	0/0:6,0:6:18.06:0,18,315
chr10	79160311	.	A	ATG	4880.51	PASS	AB=0.857;AC=13;AF=0.232;AN=56;BaseQRankSum=2.673;DP=928;FS=2.117;HRun=0;HaplotypeScore=154.5099;InbreedingCoeff=0.7512;MQ=51.03;MQ0=57;MQRankSum=2.488;QD=17.88;ReadPosRankSum=0.961;VQSLOD=4.9443;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,4:36:86.69:854,87,0	0/0:11,0:11:29.92:0,30,340	0/0:68,0:16:11.62:0,12,111	0/1:74,0:15:0.01:0,0,35	0/0:25,0:24:50.99:0,51,585	0/0:27,0:27:55.72:0,56,654	0/0:29,0:30:46.72:0,47,739	0/0:55,0:54:70:0,70,879	1/1:12,17:26:30:879,30,0	0/0:28,0:24:60.18:0,60,718	0/0:18,0:19:50.99:0,51,591	1/1:15,22:33:72.21:1103,72,0	0/1:11,17:26:11.33:877,0,11	1/1:10,13:19:45.15:722,45,0	0/0:26,0:23:66.02:0,66,762	0/0:21,0:19:54.88:0,55,631	0/0:32,0:32:56.83:0,57,740	0/0:19,0:19:37.42:0,37,499	0/0:28,0:18:20.85:0,21,224	0/0:15,0:13:30.09:0,30,360	0/0:96,0:91:99:0,177,1929	0/0:33,0:33:84.26:0,84,1013	0/1:16,1:18:9.46:9,0,339	0/0:50,0:52:99:0,129,1467	1/1:8,3:22:45:436,45,0	0/0:31,0:31:69.18:0,69,804	0/0:11,0:11:17.51:0,18,313	0/0:15,0:17:41.77:0,42,448
chr10	79160373	.	T	TTG	11276.09	PASS	AB=0.765;AC=29;AF=0.518;AN=56;BaseQRankSum=7.614;DP=948;FS=2.990;HRun=0;HaplotypeScore=201.5182;InbreedingCoeff=0.7548;MQ=51.25;MQ0=16;MQRankSum=-9.016;QD=23.01;ReadPosRankSum=-0.675;VQSLOD=4.7794;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:50:68.75:0,69,945	1/1:6,6:12:27.07:368,27,0	0/0:57,0:26:22.67:0,23,279	0/0:63,0:32:41.47:0,41,396	1/1:10,12:22:43.21:585,43,0	0/0:28,0:29:57.89:0,58,665	0/0:30,0:31:65.67:0,66,721	1/1:34,15:50:48.01:1105,48,0	1/1:18,0:32:42.73:317,43,0	0/1:20,12:31:18.18:674,0,18	1/1:15,7:22:2.71:478,3,0	1/1:37,0:38:81.22:982,81,0	1/1:28,0:28:30.74:782,31,0	1/1:23,0:23:42.12:496,42,0	1/1:14,26:39:96.32:1420,96,0	1/1:11,14:25:48.16:679,48,0	0/0:38,0:38:81.23:0,81,968	1/1:3,16:21:45.21:722,45,0	1/1:20,7:23:1.36:405,1,0	0/1:15,6:21:0.30:402,0,0	0/1:53,19:72:10.05:1093,0,10	0/0:37,0:37:30.35:0,30,785	0/0:20,0:21:44.93:0,45,575	0/0:47,0:48:99:0,110,1272	0/0:25,0:25:48.03:0,48,523	0/0:37,2:39:5.54:0,6,1028	1/1:4,15:19:17.78:768,18,0	0/0:17,0:17:42.12:0,42,500
chr10	79160375	.	G	GTA	7503.78	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=15.617;DP=943;FS=15.588;HRun=0;HaplotypeScore=208.8537;InbreedingCoeff=0.1389;MQ=51.95;MQ0=18;MQRankSum=-9.575;QD=15.57;ReadPosRankSum=4.661;VQSLOD=3.6695;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,119,1503	1/1:12,0:12:2.22:155,2,0	0/0:57,0:23:53.61:0,54,601	0/0:66,0:36:45.85:0,46,895	0/1:22,0:22:50.48:244,0,50	0/0:29,0:29:75.12:0,75,991	0/0:31,0:31:84.06:0,84,1076	0/1:51,0:47:99:423,0,282	0/1:34,0:32:6.63:7,0,255	0/1:31,0:30:99:267,0,280	0/1:22,0:22:76.04:218,0,76	1/1:13,24:37:96.25:1584,96,0	1/1:10,19:29:67.34:1324,67,0	1/1:7,13:20:51.12:825,51,0	0/1:39,0:38:12.60:685,0,13	0/1:25,0:25:55.25:298,0,55	0/0:36,0:36:84.42:0,84,1272	1/1:23,0:23:10.23:321,10,0	0/1:26,0:21:99:168,0,203	0/1:20,0:20:99:161,0,106	0/1:71,0:71:99:392,0,447	0/0:38,0:38:79.38:0,79,1297	0/0:21,0:21:57.05:0,57,791	0/0:49,0:49:99:0,132,1810	0/0:24,0:24:57.15:0,57,780	0/0:41,0:41:55.51:0,56,1472	0/1:20,0:20:12.83:431,0,13	0/0:17,0:17:45.13:0,45,663
chr10	79160409	.	C	CA	21016.39	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=0.278;DP=824;FS=9.182;HRun=0;HaplotypeScore=130.7553;InbreedingCoeff=0.9863;MQ=77.86;MQ0=2;MQRankSum=-13.778;QD=43.33;ReadPosRankSum=-1.326;VQSLOD=2.7947;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,54:56:99:2397,151,0	1/1:0,9:9:27.09:431,27,0	0/0:46,0:43:99:0,114,1401	0/0:41,0:39:99:0,105,1277	1/1:3,9:12:30.09:448,30,0	0/0:21,0:21:63.21:0,63,876	0/0:36,0:36:99:0,99,1367	1/1:3,40:42:99:1957,123,0	1/1:0,29:28:75.26:1195,75,0	1/1:3,35:38:99:1724,111,0	1/1:1,21:22:66.22:1045,66,0	1/1:1,31:32:84.29:1337,84,0	1/1:1,34:35:96.31:1507,96,0	1/1:1,23:24:72.23:1124,72,0	1/1:0,40:39:99:1817,114,0	1/1:3,20:23:65.90:966,66,0	0/0:32,0:32:90.30:0,90,1258	0/0:24,0:24:63.18:0,63,860	1/1:0,16:16:48.16:764,48,0	1/1:0,21:21:57.19:910,57,0	1/1:0,44:44:99:1671,105,0	0/0:29,0:29:87.28:0,87,1200	0/0:18,0:18:54.18:0,54,748	0/0:43,0:43:99:0,129,1772	1/1:0,16:16:42.14:671,42,0	0/0:32,2:34:6.62:0,7,1247	1/1:0,25:25:66.23:1052,66,0	0/0:13,0:13:33.11:0,33,461
chr10	79161631	.	AATTCAGAT	A	2371.64	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.990;DP=558;FS=6.984;HRun=0;HaplotypeScore=138.1786;InbreedingCoeff=0.9579;MQ=85.86;MQ0=0;MQRankSum=-8.825;QD=60.81;ReadPosRankSum=0.372;VQSLOD=3.3502;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:8.99:188,9,0	0/0:15,0:15:42.13:0,42,1659	0/0:20,0:20:60.18:0,60,2270	0/0:16,0:17:38.49:0,38,1666	0/0:30,0:30:87.30:0,87,3644	0/0:31,0:31:87.28:0,87,3516	0/0:16,0:16:48.16:0,48,2112	0/0:35,0:35:90.28:0,90,3382	1/1:0,19:19:48.16:1314,48,0	0/0:29,0:29:78.27:0,78,3219	0/0:25,0:25:69.24:0,69,3036	0/0:11,0:11:33.11:0,33,1331	0/0:17,0:17:48.16:0,48,1969	0/0:12,0:12:36.12:0,36,1569	0/0:29,0:29:84.27:0,84,3577	0/0:28,0:27:81.28:0,81,3464	0/0:12,0:12:36.10:0,36,1472	0/0:3,0:3:9.03:0,9,378	0/0:21,0:21:60.21:0,60,2399	0/0:32,0:32:93.32:0,93,3882	0/0:16,0:15:45.15:0,45,1828	0/0:25,0:25:72.25:0,72,3085	0/0:25,0:25:72.25:0,72,3005	0/0:10,0:10:30.10:0,30,1300	1/1:0,13:13:36.12:1007,36,0	0/0:24,0:24:72.25:0,72,3156	0/0:20,0:20:57.20:0,57,2414	0/0:16,0:16:48.16:0,48,1991
chr10	79161955	.	G	GTTT	1881.39	PASS	AB=0.579;AC=25;AF=0.446;AN=56;BaseQRankSum=12.491;DP=644;FS=4.837;HRun=11;HaplotypeScore=113.3017;InbreedingCoeff=0.6030;MQ=73.60;MQ0=0;MQRankSum=1.026;QD=4.91;ReadPosRankSum=1.018;VQSLOD=-0.1214;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:23:46.60:0,47,545	1/1:2,0:12:11.21:24,11,0	0/0:28,0:20:12.46:0,12,119	0/0:15,0:9:5.86:0,6,59	0/1:10,0:36:12.92:58,0,13	0/0:28,0:31:72.15:0,72,842	0/0:14,0:14:29.55:0,30,324	1/1:9,0:28:13.05:102,13,0	1/1:2,33:35:66.23:1241,66,0	1/1:3,0:23:25.51:69,26,0	1/1:7,0:29:5.61:98,6,0	1/1:4,0:17:14.95:32,15,0	0/1:8,0:22:16.11:54,0,16	1/1:2,0:16:13.35:30,13,0	0/1:4,0:27:5.90:27,0,6	1/1:1,0:17:18.69:40,19,0	0/0:13,0:14:18.59:0,19,241	0/0:13,0:13:29.98:0,30,335	0/1:9,0:27:29.37:173,0,29	0/1:7,0:32:44.57:45,0,45	1/1:6,0:21:11.21:24,11,0	0/0:21,0:21:48.08:0,48,548	0/0:24,0:25:52.48:0,52,611	0/0:9,0:9:23.60:0,24,242	0/0:19,0:19:36.79:0,37,550	0/0:34,0:35:93.05:0,93,1042	1/1:8,0:41:32.97:73,33,0	0/0:14,0:14:42.12:0,42,491
chr10	79162090	.	G	GCA	1252.76	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.377;DP=627;FS=3.840;HRun=0;HaplotypeScore=74.5849;InbreedingCoeff=0.9963;MQ=72.76;MQ0=0;MQRankSum=-1.679;QD=43.20;ReadPosRankSum=1.682;VQSLOD=5.1500;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:84.28:0,84,1235	0/0:8,0:8:24.08:0,24,353	0/0:13,0:13:36.12:0,36,509	0/0:9,0:9:27.09:0,27,394	0/0:39,0:39:99:0,117,1717	0/0:21,0:21:63.21:0,63,928	0/0:20,0:20:57.18:0,57,818	0/0:25,0:24:72.24:0,72,1060	1/1:0,29:29:72.25:1348,72,0	0/0:25,0:25:72.24:0,72,1044	0/0:33,0:33:90.26:0,90,1266	0/0:22,0:22:66.22:0,66,972	0/0:18,0:18:51.16:0,51,732	0/0:15,0:15:45.15:0,45,663	0/0:20,0:20:57.19:0,57,840	0/0:20,0:20:57.19:0,57,840	0/0:21,0:21:54.18:0,54,795	0/0:21,0:21:63.21:0,63,928	0/0:31,0:30:71.63:0,72,1223	0/0:32,0:32:96.32:0,96,1413	0/0:16,0:16:48.16:0,48,707	0/0:17,0:17:48.15:0,48,688	0/0:31,0:31:87.29:0,87,1280	0/0:16,0:16:45.15:0,45,663	0/0:25,0:25:63.21:0,63,928	0/0:25,0:25:75.25:0,75,1105	0/0:32,0:32:93.31:0,93,1370	0/0:10,0:10:30.10:0,30,442
chr10	79162624	.	T	TTCTC	26677.92	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-13.935;DP=637;FS=4.642;HRun=0;HaplotypeScore=85.1645;InbreedingCoeff=0.9960;MQ=85.34;MQ0=2;MQRankSum=-6.368;QD=59.28;ReadPosRankSum=1.313;VQSLOD=6.3350;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,28:35:74.83:1957,75,0	1/1:0,14:15:42.14:1100,42,0	0/0:29,0:29:65.01:0,65,1226	0/0:16,0:16:36.12:0,36,645	1/1:3,21:26:57.20:1485,57,0	0/0:36,0:36:99:0,99,1815	0/0:12,0:12:36.12:0,36,662	1/1:9,20:29:69.24:1788,69,0	1/1:1,21:23:57.20:1496,57,0	1/1:5,22:28:69.22:1752,69,0	1/1:8,18:26:57.20:1494,57,0	1/1:1,19:20:48.16:1267,48,0	1/1:8,20:28:63.22:1634,63,0	1/1:3,27:30:84.29:2180,84,0	1/1:7,20:25:54.19:1377,54,0	1/1:3,17:20:39.13:1029,39,0	0/0:11,0:11:33.11:0,33,607	1/1:0,8:8:24.08:633,24,0	1/1:4,15:20:51.16:1180,51,0	1/1:5,19:24:51.18:1345,51,0	1/1:4,26:32:72.25:1891,72,0	0/0:25,0:25:75.25:0,75,1348	0/0:24,0:24:66.23:0,66,1208	0/0:5,0:5:15.05:0,15,276	1/1:3,11:15:30.10:775,30,0	0/0:22,0:22:60.21:0,60,1104	1/1:6,32:41:87.30:2295,87,0	0/0:7,0:7:18.06:0,18,331
chr10	79162940	.	ATCAGCTGAAAGCTGTACAGGGC	A	7264.49	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.212;DP=622;FS=0.600;HRun=0;HaplotypeScore=351.9990;InbreedingCoeff=0.9905;MQ=78.10;MQ0=0;MQRankSum=-10.320;QD=108.43;ReadPosRankSum=4.513;VQSLOD=3.6763;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,10121	0/0:14,0:14:39.12:0,39,3701	0/0:20,0:20:51.03:0,51,2321	0/0:11,0:11:24.04:0,24,923	0/0:27,0:27:75.26:0,75,6874	0/0:26,0:26:78.24:0,78,6482	0/0:31,0:31:90.31:0,90,7943	0/0:23,0:23:60.21:0,60,4483	0/0:20,0:20:57.20:0,57,5300	0/0:25,0:24:72.24:0,72,6702	0/0:15,0:15:42.14:0,42,3853	1/1:4,19:23:51.18:3087,51,0	1/1:4,18:22:39.13:2361,39,0	1/1:6,16:22:29.89:1816,30,0	0/0:27,0:27:75.26:0,75,7014	0/0:23,0:23:69.24:0,69,6798	0/0:16,0:16:39.13:0,39,3261	0/0:5,0:5:15.05:0,15,1566	0/0:25,0:25:75.26:0,75,6331	0/0:30,0:30:90.31:0,90,7936	0/0:28,0:28:81.28:0,81,7511	0/0:26,0:26:78.27:0,78,7385	0/0:28,0:28:84.26:0,84,8029	0/0:28,0:27:84.29:0,84,7676	0/0:18,0:18:54.19:0,54,5459	0/0:18,0:18:54.19:0,54,5206	0/0:29,0:29:84.20:0,84,7316	0/0:6,0:6:18.06:0,18,1551
chr10	79168471	.	GT	G	698.33	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.381;DP=690;FS=3.307;HRun=9;HaplotypeScore=68.7726;InbreedingCoeff=0.9979;MQ=61.83;MQ0=5;MQRankSum=1.010;QD=16.24;ReadPosRankSum=1.266;VQSLOD=3.9934;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:46:99:0,129,1432	0/0:10,0:10:30.09:0,30,346	0/0:27,0:14:25.26:0,25,250	0/0:26,0:15:30.89:0,31,316	0/0:17,0:17:51.12:0,51,567	0/0:23,1:24:38.71:0,39,688	0/0:23,0:23:60.16:0,60,680	0/0:38,0:37:93.27:0,93,1061	0/0:30,0:31:84.08:0,84,946	0/0:29,0:28:72.21:0,72,828	0/0:22,0:22:57.17:0,57,655	0/0:24,0:24:66.19:0,66,759	0/0:23,0:23:66.19:0,66,753	0/0:21,0:20:51.15:0,51,587	0/0:19,0:19:47.81:0,48,530	0/0:18,0:18:45.13:0,45,511	0/0:44,0:44:99:0,108,1228	0/0:17,0:17:45.02:0,45,473	0/0:22,0:21:44.91:0,45,487	0/0:21,0:21:51.15:0,51,583	0/0:18,0:19:47.97:0,48,531	0/0:13,0:13:33.10:0,33,381	0/0:17,0:18:42.84:0,43,466	0/0:39,0:39:99:0,111,1275	0/0:20,1:21:29.70:0,30,593	1/1:8,21:29:32.17:518,32,0	0/0:33,0:32:90.27:0,90,1035	1/1:2,12:14:33.02:302,33,0
chr10	79169546	.	TG	T	10489.84	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=8.282;DP=675;FS=1.784;HRun=8;HaplotypeScore=73.3591;InbreedingCoeff=0.9995;MQ=81.24;MQ0=0;MQRankSum=-1.988;QD=24.39;ReadPosRankSum=3.995;VQSLOD=5.5824;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:33:84.13:811,84,0	1/1:3,14:17:45.07:434,45,0	0/0:27,0:27:65.90:0,66,712	0/0:33,0:32:60.51:0,61,757	1/1:2,13:15:36.05:348,36,0	0/0:18,1:19:22.17:0,22,539	0/0:21,0:21:63.18:0,63,750	1/1:3,20:23:60.08:574,60,0	1/1:4,22:26:69.10:666,69,0	1/1:0,23:23:69.11:666,69,0	1/1:3,17:20:54.08:520,54,0	1/1:4,15:19:39.06:376,39,0	1/1:4,18:22:51.08:492,51,0	1/1:5,26:31:78.12:751,78,0	1/1:2,25:27:72.12:695,72,0	1/1:1,19:20:57.09:550,57,0	0/0:24,0:24:63.17:0,63,740	1/1:3,21:24:54.08:521,54,0	1/1:6,13:18:39.03:366,39,0	1/1:5,14:19:48.08:463,48,0	1/1:5,38:43:99:1099,114,0	0/0:24,0:24:69.20:0,69,821	0/0:24,0:24:63.19:0,63,760	0/0:34,0:34:90.23:0,90,1059	1/1:7,21:28:66.10:636,66,0	0/0:21,0:22:51.01:0,51,581	1/1:3,18:21:54.09:521,54,0	0/0:17,0:17:39.11:0,39,460
chr10	79169554	.	GT	G	1773.14	PASS	AB=0.975;AC=25;AF=0.446;AN=56;BaseQRankSum=16.785;DP=683;FS=0.609;HRun=1;HaplotypeScore=102.2793;InbreedingCoeff=0.1937;MQ=78.10;MQ0=0;MQRankSum=-0.769;QD=4.07;ReadPosRankSum=8.312;VQSLOD=-0.0318;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:40:99:111,0,148	0/1:17,1:18:11.97:67,0,12	0/0:32,0:30:74.40:0,74,1001	0/0:33,0:32:58.83:0,59,1023	1/1:13,0:13:8.77:42,9,0	0/0:18,0:18:48.72:0,49,693	0/0:24,0:24:72.19:0,72,965	0/1:25,0:25:7.92:8,0,106	0/1:25,1:26:15.32:119,0,15	0/1:27,0:27:61.53:62,0,75	1/1:17,2:19:36.50:161,37,0	0/1:19,0:19:37.61:66,0,38	1/1:18,2:20:37.28:168,37,0	0/1:31,0:31:28.89:191,0,29	1/1:26,0:26:27.66:147,28,0	1/1:20,0:20:18.55:88,19,0	0/0:20,0:20:60.20:0,60,827	0/1:25,0:25:18.48:69,0,18	0/1:15,1:15:6.56:83,0,7	1/1:15,3:18:34.08:164,34,0	0/1:42,2:44:13.76:131,0,14	0/0:26,0:26:75.12:0,75,961	0/0:26,0:26:72.03:0,72,938	0/0:34,0:34:92.83:0,93,1256	1/1:23,3:26:0.57:155,1,0	0/0:20,0:20:57.08:0,57,734	0/1:21,2:23:18.03:133,0,18	0/0:14,0:14:39.09:0,39,530
chr10	79170537	.	A	AT	2796.94	PASS	AB=0.795;AC=34;AF=0.680;AN=50;BaseQRankSum=3.938;DP=206;FS=17.901;HRun=7;HaplotypeScore=37.6017;InbreedingCoeff=0.6412;MQ=80.92;MQ0=2;MQRankSum=0.409;QD=22.02;ReadPosRankSum=0.316;VQSLOD=1.8021;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:9.03:109,9,0	1/1:1,0:1:3.01:36,3,0	0/0:21,0:12:8.48:0,8,129	0/1:22,0:9:13.77:14,0,36	1/1:2,4:6:12.04:145,12,0	0/0:7,0:7:18.03:0,18,174	0/0:1,0:1:3:0,3,29	1/1:1,13:14:39.12:470,39,0	1/1:0,1:1:3.01:36,3,0	1/1:2,12:14:36.09:413,36,0	1/1:1,7:8:18.05:213,18,0	1/1:0,4:4:9.03:109,9,0	1/1:0,2:2:6.02:72,6,0	1/1:1,3:4:9.03:109,9,0	1/1:0,4:4:9.03:109,9,0	1/1:1,2:3:6.02:72,6,0	0/0:22,0:22:65.95:0,66,616	0/0:8,0:8:17.98:0,18,159	0/1:4,9:12:1.96:233,0,2	1/1:1,6:7:18.06:217,18,0	1/1:0,2:2:3.01:36,3,0	./.	./.	./.	1/1:2,7:9:21.06:254,21,0	0/0:12,0:12:36.06:0,36,348	1/1:1,9:10:27.08:326,27,0	0/0:5,0:5:15.02:0,15,145
chr10	79176076	.	TAC	T	862.54	PASS	AB=0.967;AC=28;AF=0.500;AN=56;BaseQRankSum=9.434;DP=455;FS=20.015;HRun=0;HaplotypeScore=90.3854;InbreedingCoeff=0.0687;MQ=61.22;MQ0=8;MQRankSum=-5.847;QD=2.68;ReadPosRankSum=-0.972;VQSLOD=0.4707;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:28:9.40:9,0,15	0/1:4,0:4:16.32:17,0,16	0/0:14,0:7:3.47:0,3,26	0/0:20,0:11:3:0,3,27	0/1:21,0:21:8.71:38,0,9	0/0:25,0:24:20.73:0,21,666	0/0:14,0:14:21.07:0,21,308	0/0:13,0:13:5.98:0,6,47	0/1:16,0:16:20.33:23,0,20	0/1:15,0:15:15.68:16,0,16	1/1:15,0:15:19.58:90,20,0	0/1:3,5:9:31.13:102,0,31	1/1:6,7:13:9.03:103,9,0	1/1:5,13:17:15.04:171,15,0	1/1:18,0:18:1.62:69,2,0	0/1:10,0:10:14.40:17,0,14	0/0:22,2:24:30.04:0,30,378	1/1:20,0:20:1.93:11,2,0	0/1:12,0:11:7.02:7,0,18	1/1:22,0:22:19.58:90,20,0	0/1:24,0:24:5.21:5,0,22	0/1:14,0:14:29.55:30,0,294	0/0:11,0:11:15.05:0,15,209	0/0:12,0:12:18.06:0,18,277	0/1:16,0:16:10.79:37,0,11	0/1:21,0:20:8.04:50,0,8	1/1:18,0:18:27.84:128,28,0	1/1:6,0:6:5.60:26,6,0
chr10	79176098	.	CACACACACAT	C	3624.29	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=7.286;DP=526;FS=13.449;HRun=0;HaplotypeScore=144.4621;InbreedingCoeff=0.5798;MQ=55.27;MQ0=15;MQRankSum=-3.965;QD=10.12;ReadPosRankSum=0.489;VQSLOD=2.0993;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:36:7.33:77,7,0	1/1:6,0:6:6.02:73,6,0	0/1:14,0:4:18.04:18,0,65	0/1:29,0:12:0.43:0,0,86	1/1:24,2:26:12.04:261,12,0	0/0:27,0:25:63.05:0,63,2545	0/0:14,0:14:36.08:0,36,1154	0/1:15,0:14:30.40:102,0,30	0/0:18,0:18:27.56:0,28,880	1/1:15,0:15:5.33:217,5,0	1/1:21,2:23:21.07:371,21,0	0/0:11,0:11:27.08:0,27,786	0/0:11,0:11:15.03:0,15,383	0/0:23,0:22:32.95:0,33,738	1/1:23,0:24:21.06:246,21,0	0/1:16,0:16:14.73:30,0,15	0/0:21,0:21:21.56:0,22,1260	0/1:18,0:18:50.51:379,0,51	1/1:14,0:14:27.09:192,27,0	1/1:24,0:24:21.06:255,21,0	1/1:20,0:20:3.01:37,3,0	0/0:15,0:14:36.11:0,36,1459	0/0:12,0:11:30.04:0,30,638	0/0:16,0:16:22.71:0,23,1273	1/1:20,0:20:7.65:107,8,0	1/1:5,17:22:38.73:701,39,0	1/1:25,0:25:30.80:368,31,0	1/1:1,8:9:6.02:189,6,0
chr10	79176100	.	CACACACAT	C	5398.21	PASS	AB=0.893;AC=32;AF=0.571;AN=56;BaseQRankSum=6.613;DP=520;FS=17.386;HRun=0;HaplotypeScore=124.1329;InbreedingCoeff=0.6768;MQ=55.54;MQ0=15;MQRankSum=-3.904;QD=15.38;ReadPosRankSum=0.483;VQSLOD=2.9213;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,29:36:7.80:172,8,0	1/1:1,5:6:6.02:163,6,0	0/1:13,0:4:18.04:18,0,44	0/1:24,0:9:0.43:0,0,86	1/1:3,21:24:12.04:285,12,0	0/0:26,0:24:63.03:0,63,2083	0/0:15,0:15:39.04:0,39,954	1/1:16,0:15:14.04:188,14,0	0/0:19,0:19:27.56:0,28,647	1/1:1,15:16:32.98:399,33,0	1/1:3,20:23:21.07:530,21,0	0/0:11,0:11:27.06:0,27,575	0/0:11,0:11:15.03:0,15,278	0/0:24,0:23:36.02:0,36,583	1/1:4,19:23:20.90:502,21,0	0/1:4,12:16:9.19:96,0,9	0/0:20,0:20:21.42:0,21,1064	0/1:19,0:19:17.15:358,0,17	1/1:2,12:14:35.69:326,36,0	1/1:1,23:24:21.07:570,21,0	1/1:4,16:20:3.01:82,3,0	0/0:15,0:14:36.11:0,36,1171	0/0:12,0:11:30.01:0,30,466	0/0:16,0:16:25.71:0,26,1067	1/1:3,17:20:12.02:268,12,0	1/1:21,0:20:38.73:503,39,0	1/1:1,24:25:31.28:816,31,0	1/1:9,0:9:6.02:123,6,0
chr10	79176104	.	C	CAT	291.13	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.437;DP=512;FS=1.047;HRun=0;HaplotypeScore=107.9215;InbreedingCoeff=0.5398;MQ=57.16;MQ0=13;MQRankSum=1.882;QD=15.32;ReadPosRankSum=0.963;VQSLOD=3.6965;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:12.22:0,12,78	0/0:6,0:6:8.75:0,9,55	0/0:14,0:8:8.24:0,8,134	0/0:26,0:12:12.38:0,12,202	0/0:24,0:24:14.52:0,15,85	0/0:26,0:24:63.12:0,63,826	0/0:13,0:13:39.04:0,39,464	0/0:15,0:14:38.75:0,39,297	1/1:2,17:19:5.60:371,6,0	0/0:16,0:16:32.65:0,33,241	0/0:23,0:23:20.18:0,20,107	0/0:12,0:12:29.68:0,30,243	0/0:9,0:9:14.80:0,15,103	0/0:23,0:22:38.74:0,39,293	0/0:21,0:21:18.22:0,18,109	0/0:15,0:15:7.70:0,8,53	0/0:22,0:22:24.99:0,25,419	0/0:20,0:20:53.34:0,53,377	0/0:13,0:13:32.69:0,33,239	0/0:23,0:23:20.18:0,20,107	0/0:18,0:18:7.69:0,8,45	0/0:15,0:14:26.29:0,26,404	0/0:12,0:11:30:0,30,323	0/0:17,0:17:43.22:0,43,464	0/0:20,0:20:14.52:0,15,86	0/0:19,0:18:39.80:0,40,263	0/0:24,0:24:30.66:0,31,160	0/0:9,0:9:5.75:0,6,30
chr10	79176106	.	CAT	C	2403.24	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=10.608;DP=503;FS=11.276;HRun=0;HaplotypeScore=96.6387;InbreedingCoeff=0.4401;MQ=57.31;MQ0=13;MQRankSum=-3.066;QD=6.02;ReadPosRankSum=2.574;VQSLOD=1.9070;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:35:8.28:61,8,0	1/1:6,0:6:5.95:41,6,0	0/1:15,0:8:16.37:16,0,54	0/1:25,0:12:1.25:1,0,114	1/1:23,0:23:11.90:86,12,0	0/0:23,4:25:29.54:0,30,912	0/0:13,0:13:39.02:0,39,485	1/1:2,12:14:38.01:283,38,0	0/1:19,0:19:6.43:20,0,6	1/1:15,0:15:32.85:253,33,0	1/1:22,0:22:20.79:142,21,0	0/1:13,0:13:14.58:15,0,152	0/1:9,0:9:23.58:24,0,34	0/1:23,0:22:12.32:12,0,160	1/1:20,0:20:20.52:134,21,0	0/1:15,0:15:9.03:34,0,9	0/0:22,0:22:21.13:0,21,472	1/1:20,0:20:56.62:420,57,0	1/1:13,0:13:35.68:267,36,0	1/1:23,0:23:20.82:144,21,0	1/1:17,0:17:2.98:21,3,0	0/0:15,0:14:12.49:0,12,451	0/0:11,0:10:29.87:0,30,269	0/0:16,0:16:28.65:0,29,495	1/1:19,0:19:11.91:84,12,0	1/1:17,0:16:40.70:287,41,0	1/1:24,0:24:31.80:212,32,0	1/1:9,0:9:5.93:39,6,0
chr10	79177706	.	G	GT	393.20	PASS	AB=0.975;AC=10;AF=0.179;AN=56;BaseQRankSum=2.613;DP=509;FS=1.569;HRun=1;HaplotypeScore=112.2130;InbreedingCoeff=0.6808;MQ=65.36;MQ0=4;MQRankSum=-4.953;QD=4.14;ReadPosRankSum=1.066;VQSLOD=0.3227;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,1:19:20.48:20,0,73	0/0:6,0:6:9.01:0,9,92	0/0:34,0:21:45.21:0,45,613	0/0:27,0:12:24.06:0,24,284	0/0:21,0:21:37.92:0,38,315	0/0:17,0:17:45.15:0,45,581	0/0:9,0:9:27.07:0,27,335	0/0:17,0:17:49.37:0,49,448	1/1:15,0:15:0.98:5,1,0	0/0:19,0:19:42.51:0,43,389	0/0:25,0:25:41.96:0,42,325	1/1:11,6:17:32.06:251,32,0	1/1:14,3:17:26.39:183,26,0	1/1:7,2:9:8.97:77,9,0	0/0:21,0:21:33:0,33,401	0/0:19,0:19:18.06:0,18,228	0/0:21,0:21:57.61:0,58,718	0/0:9,0:9:17.57:0,18,130	0/0:13,0:13:38.57:0,39,336	0/0:22,0:22:48.31:0,48,462	0/0:13,0:11:23.14:0,23,169	0/0:14,0:14:42.14:0,42,543	0/0:31,0:31:87.21:0,87,1107	0/0:10,0:10:30.10:0,30,389	0/0:25,0:25:44.21:0,44,181	0/1:18,0:18:1.07:1,0,28	0/0:37,0:37:33.45:0,33,388	0/0:3,0:3:2.44:0,2,6
chr10	79177707	.	TG	T	2490.40	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=2.029;DP=525;FS=0.906;HRun=1;HaplotypeScore=104.9122;InbreedingCoeff=0.9417;MQ=64.91;MQ0=5;MQRankSum=-5.728;QD=20.25;ReadPosRankSum=1.109;VQSLOD=3.8496;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,12:19:29.54:371,30,0	0/0:6,0:6:2.25:0,2,35	0/0:33,0:20:39.33:0,39,535	0/0:28,1:13:26.49:0,26,264	0/0:21,0:21:40.29:0,40,231	0/0:19,0:19:45.06:0,45,561	0/0:11,0:11:26.45:0,26,330	0/0:18,0:17:49.17:0,49,329	1/1:15,0:15:41.87:347,42,0	0/0:20,0:20:44.15:0,44,324	0/0:24,0:24:21.34:0,21,240	1/1:17,0:17:26.29:196,26,0	1/1:16,1:17:32.51:217,33,0	1/1:9,0:9:16.83:113,17,0	0/0:24,0:24:29.05:0,29,182	0/0:20,0:20:17.20:0,17,131	0/0:21,1:22:19.89:0,20,671	0/0:9,0:9:19.64:0,20,150	0/0:13,0:13:38.18:0,38,250	0/0:23,0:23:46.46:0,46,259	0/0:13,0:11:28.23:0,28,198	0/0:16,0:16:42.06:0,42,504	0/0:31,0:31:87.16:0,87,1077	0/0:11,0:11:30.03:0,30,357	1/1:12,13:25:66.39:728,66,0	1/1:0,18:18:54.05:650,54,0	0/0:39,0:39:17.22:0,17,184	1/1:0,3:3:6.01:71,6,0
chr10	79177708	.	G	GT	2088.41	PASS	AB=0.938;AC=27;AF=0.482;AN=56;BaseQRankSum=2.992;DP=563;FS=9.488;HRun=10;HaplotypeScore=129.0143;InbreedingCoeff=0.5963;MQ=63.91;MQ0=6;MQRankSum=1.561;QD=6.49;ReadPosRankSum=-3.205;VQSLOD=0.4331;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:43.85:44,0,48	0/1:6,0:6:0.22:2,0,0	0/1:34,0:20:6.35:6,0,86	0/0:29,0:13:11.44:0,11,73	1/1:22,0:22:13.53:203,14,0	0/0:19,0:19:41.91:0,42,344	0/0:11,0:12:1.17:0,1,153	1/1:21,0:19:24.08:241,24,0	1/1:17,0:17:2.69:9,3,0	1/1:19,0:19:28.75:247,29,0	1/1:27,0:27:17.61:216,18,0	1/1:19,0:19:32.99:266,33,0	1/1:22,0:22:29.47:215,29,0	1/1:10,0:9:10.25:74,10,0	0/0:25,0:25:13.97:0,14,55	0/0:22,0:22:1.23:0,1,3	0/0:23,0:23:47.57:0,48,392	0/1:5,4:9:3.78:138,0,4	1/1:13,0:13:16.58:241,17,0	1/1:23,0:23:3.79:160,4,0	1/1:10,3:11:21.50:211,22,0	0/0:18,0:18:29.86:0,30,246	0/0:28,2:30:39.88:0,40,528	0/0:13,0:13:20.94:0,21,172	0/0:29,0:28:20.32:0,20,117	0/0:18,0:18:6.89:0,7,17	0/1:43,0:43:3.52:5,0,4	0/0:3,0:3:2.51:0,3,7
chr10	79177710	.	TTTTTTTTTG	T	7059.12	PASS	AB=0.980;AC=31;AF=0.554;AN=56;BaseQRankSum=1.557;DP=564;FS=5.826;HRun=0;HaplotypeScore=165.9905;InbreedingCoeff=0.5323;MQ=63.38;MQ0=10;MQRankSum=1.270;QD=19.50;ReadPosRankSum=0.197;VQSLOD=3.9356;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:2.14:2,0,888	1/1:1,5:6:6.01:108,6,0	0/1:36,0:18:25.13:25,0,316	0/0:27,0:12:16.50:0,16,228	1/1:1,21:22:50.75:855,51,0	0/0:21,0:21:54.16:0,54,2198	0/0:12,0:12:8.27:0,8,897	1/1:6,16:20:43.26:648,43,0	0/0:18,0:18:4.14:0,4,378	1/1:3,15:18:35.59:584,36,0	1/1:3,24:27:59.84:1018,60,0	0/1:19,0:19:64.39:64,0,574	0/1:22,0:22:71.39:71,0,721	0/0:9,0:8:1.35:0,1,399	1/1:3,21:24:2.06:615,2,0	1/1:3,17:20:3.01:83,3,0	0/0:23,0:23:56.60:0,57,1859	0/1:8,1:9:8.86:173,0,9	1/1:3,11:14:36.09:571,36,0	1/1:4,20:23:51.57:1017,52,0	1/1:10,1:9:24.40:366,24,0	0/0:17,0:17:42.13:0,42,1638	0/0:30,0:30:72.09:0,72,2037	0/0:15,0:15:33.10:0,33,1408	0/0:29,0:28:47.61:0,48,1044	1/1:18,0:18:26.81:268,27,0	1/1:6,37:43:17.46:493,17,0	1/1:3,0:3:6.01:98,6,0
chr10	79177723	.	T	TG	1034.01	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=1.272;DP=593;FS=2.893;HRun=0;HaplotypeScore=127.5515;InbreedingCoeff=0.7573;MQ=60.40;MQ0=12;MQRankSum=-6.104;QD=12.61;ReadPosRankSum=-0.173;VQSLOD=4.2686;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,14:26:53.86:577,54,0	0/0:5,0:5:5.56:0,6,30	0/0:41,0:14:29.18:0,29,271	0/1:34,0:11:6.51:7,0,95	0/0:24,0:24:36.23:0,36,177	0/0:22,0:22:63.11:0,63,818	0/0:13,0:13:36.11:0,36,477	0/0:22,0:20:29.62:0,30,170	0/0:17,0:17:40.98:0,41,295	0/0:24,0:22:49.60:0,50,335	0/0:25,0:25:39.56:0,40,236	0/0:17,0:17:23.99:0,24,221	0/0:24,0:24:37.64:0,38,277	0/0:8,0:7:14.27:0,14,74	0/0:26,0:26:32.81:0,33,176	0/0:23,0:23:14.57:0,15,108	0/0:22,0:22:63.06:0,63,763	0/0:12,0:12:22.82:0,23,139	0/0:20,0:19:35.19:0,35,237	0/0:24,0:23:47.86:0,48,262	0/0:15,0:13:28.66:0,29,193	0/0:18,0:18:54.12:0,54,704	0/0:25,0:25:75.15:0,75,921	0/0:13,0:13:33.11:0,33,452	1/1:2,20:21:40.05:576,40,0	0/0:21,0:21:50.78:0,51,407	0/0:39,0:39:20.77:0,21,102	0/0:11,0:11:24.33:0,24,164
chr10	79177725	.	T	TTTTTG	932.73	PASS	AB=0.950;AC=7;AF=0.125;AN=56;BaseQRankSum=1.398;DP=598;FS=24.192;HRun=0;HaplotypeScore=173.7178;InbreedingCoeff=-0.1570;MQ=61.75;MQ0=13;MQRankSum=-3.472;QD=5.98;ReadPosRankSum=-2.480;VQSLOD=0.9807;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:27.18:183,0,27	0/0:5,0:5:3.48:0,3,41	0/0:43,0:15:29.12:0,29,225	0/1:34,0:11:18.15:18,0,66	0/0:24,0:24:1.60:0,2,255	0/0:22,0:22:63.12:0,63,1053	0/0:13,0:13:36.10:0,36,588	0/1:24,0:22:5.14:5,0,147	0/0:17,0:17:28.29:0,28,254	0/0:25,0:23:17.57:0,18,194	0/0:25,0:25:10.54:0,11,247	0/1:17,0:17:47.23:245,0,47	0/1:23,1:24:59.56:370,0,60	0/1:5,4:8:28.69:177,0,29	0/0:27,0:27:35.83:0,36,420	0/0:23,0:23:17.96:0,18,162	0/0:20,0:20:33.18:0,33,799	0/0:12,0:12:9.19:0,9,84	0/0:20,0:19:18.46:0,18,234	0/0:24,0:23:15.20:0,15,354	0/0:15,0:13:5.11:0,5,39	0/0:18,0:18:54.09:0,54,914	0/0:26,0:26:63.02:0,63,940	0/0:13,0:13:36.11:0,36,609	0/1:22,0:21:12.84:60,0,13	0/0:20,0:20:8.60:0,9,127	0/0:39,0:39:20.16:0,20,230	0/0:11,0:11:11.74:0,12,78
chr10	79177727	.	TTG	T	1502.18	PASS	AB=0.991;AC=22;AF=0.393;AN=56;BaseQRankSum=6.885;DP=600;FS=6.062;HRun=0;HaplotypeScore=127.0647;InbreedingCoeff=-0.3486;MQ=62.60;MQ0=13;MQRankSum=1.649;QD=3.27;ReadPosRankSum=-3.051;VQSLOD=1.6422;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,5:27:97.38:129,0,97	0/1:7,0:7:9.73:10,0,40	0/1:44,0:16:50.01:50,0,71	0/1:34,0:11:10.03:10,0,44	0/1:25,0:25:59.44:61,0,59	0/0:22,0:22:62.50:0,62,724	0/0:12,0:12:36.08:0,36,440	0/1:24,0:22:82.82:107,0,83	1/1:18,0:18:36.39:330,36,0	0/1:27,0:25:99:140,0,187	0/1:25,0:25:18.11:138,0,18	0/1:15,0:15:36.33:36,0,56	0/1:24,0:24:89.73:90,0,101	0/0:8,0:7:15.58:0,16,81	0/1:27,0:27:7.69:8,0,104	0/0:24,0:24:21.74:0,22,186	0/0:18,0:18:49.65:0,50,557	0/1:11,0:11:42.23:42,0,102	0/1:20,0:19:61.37:61,0,181	0/1:24,0:23:33.95:34,0,69	1/1:15,0:13:4.90:127,5,0	0/0:18,0:18:53.42:0,53,614	0/0:25,0:25:60.88:0,61,609	0/0:14,0:14:38.99:0,39,453	0/1:22,0:21:40.96:41,0,190	0/1:20,0:20:99:214,0,123	0/1:39,0:39:9.05:9,0,32	0/1:11,0:11:32.98:33,0,120
chr10	79177729	.	G	GTT	450.93	PASS	AB=0.995;AC=13;AF=0.232;AN=56;BaseQRankSum=2.849;DP=593;FS=3.962;HRun=13;HaplotypeScore=134.7168;InbreedingCoeff=0.3772;MQ=62.82;MQ0=13;MQRankSum=-1.527;QD=2.21;ReadPosRankSum=-1.654;VQSLOD=0.4226;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,5:26:29.11:310,29,0	0/0:7,0:7:8.97:0,9,75	0/1:42,0:17:5.03:5,0,51	0/1:34,0:11:14.84:15,0,55	0/0:25,0:25:23.45:0,23,237	0/0:20,0:22:47.13:0,47,390	0/0:12,0:12:32.94:0,33,283	0/0:24,0:23:7.05:0,7,157	1/1:17,0:17:3:27,3,0	0/0:25,0:25:6.18:0,6,205	0/0:24,0:25:15.50:0,16,176	0/1:15,0:15:14.47:14,0,16	0/1:25,0:25:24.87:25,0,50	0/1:8,0:7:14:14,0,18	0/0:28,0:28:38.77:0,39,328	0/0:24,0:24:23.98:0,24,206	0/0:16,0:18:32.49:0,32,270	0/0:12,0:12:11.87:0,12,105	0/0:18,0:17:29.91:0,30,251	0/0:24,0:23:36.47:0,36,276	1/1:13,0:13:3.97:21,4,0	0/0:19,0:19:35.68:0,36,308	0/0:20,0:22:5.83:0,6,211	0/0:14,0:14:23.69:0,24,203	1/1:17,4:20:15.04:178,15,0	0/0:17,0:18:9.05:0,9,143	0/0:39,0:39:23.04:0,23,183	0/0:11,0:11:13.20:0,13,131
chr10	79178889	.	G	GAA	10620.86	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-5.777;DP=701;FS=2.199;HRun=1;HaplotypeScore=81.3559;InbreedingCoeff=0.9994;MQ=87.65;MQ0=0;MQRankSum=-4.443;QD=51.31;ReadPosRankSum=3.202;VQSLOD=4.9703;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,44:45:99:2376,123,0	0/0:16,0:16:45.15:0,45,689	0/0:30,0:30:80.84:0,81,1216	0/0:23,0:23:63.15:0,63,878	0/0:25,0:25:69.23:0,69,1057	0/0:32,0:31:96.33:0,96,1469	0/0:19,0:19:57.19:0,57,872	0/0:35,0:35:99:0,99,1457	1/1:0,26:26:72.25:1391,72,0	0/0:25,0:25:75.25:0,75,1130	0/0:27,0:27:72.23:0,72,1079	1/1:0,34:35:84.29:1622,84,0	1/1:3,29:33:87.40:1680,87,0	1/1:3,21:24:66.22:1214,66,0	0/0:27,0:27:78.26:0,78,1191	0/0:21,0:21:63.20:0,63,945	0/0:35,0:35:99:0,105,1551	0/0:12,0:12:36.12:0,36,551	0/0:16,0:16:48.16:0,48,734	0/0:24,0:24:69.23:0,69,1054	0/0:30,0:30:87.30:0,87,1331	0/0:18,0:18:54.18:0,54,813	0/0:24,0:24:66.21:0,66,987	0/0:24,0:24:72.21:0,72,1060	1/1:0,9:9:24.08:464,24,0	1/1:2,24:26:32.30:1352,32,0	0/0:31,0:31:93.31:0,93,1403	1/1:0,9:9:27.09:521,27,0
chr10	79179950	.	C	CT	5716.64	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-6.164;DP=608;FS=0.368;HRun=1;HaplotypeScore=60.9562;InbreedingCoeff=0.9985;MQ=82.97;MQ0=0;MQRankSum=-2.146;QD=41.42;ReadPosRankSum=1.618;VQSLOD=5.3121;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,10:14:33.09:498,33,0	0/0:16,0:16:48.16:0,48,671	0/0:21,0:21:57.17:0,57,767	0/0:16,0:16:48.12:0,48,648	0/0:29,0:29:81.27:0,81,1127	0/0:30,0:30:90.30:0,90,1257	0/0:14,0:14:42.14:0,42,585	0/0:37,0:37:99:0,105,1431	1/1:0,11:11:33.11:528,33,0	0/0:32,0:32:93.31:0,93,1292	0/0:27,0:27:78.26:0,78,1090	1/1:0,17:17:45.15:720,45,0	1/1:2,20:22:57.15:883,57,0	1/1:1,23:24:60.20:957,60,0	0/0:14,0:14:42.14:0,42,588	0/0:18,0:18:51.17:0,51,712	0/0:22,0:22:66.20:0,66,905	0/0:16,0:16:45.13:0,45,611	0/0:14,0:14:42.14:0,42,588	0/0:30,0:30:90.30:0,90,1259	0/0:18,0:18:54.16:0,54,734	0/0:28,0:28:84.28:0,84,1174	0/0:33,0:33:96.32:0,96,1343	0/0:18,0:18:54.18:0,54,755	1/1:1,21:22:57.18:887,57,0	1/1:1,20:21:60.20:959,60,0	0/0:37,0:37:99:0,111,1496	1/1:1,5:6:18.06:284,18,0
chr10	79179987	.	AT	A	1389.73	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.734;DP=655;FS=3.942;HRun=8;HaplotypeScore=75.6296;InbreedingCoeff=0.9981;MQ=80.71;MQ0=0;MQRankSum=-5.685;QD=21.71;ReadPosRankSum=0.258;VQSLOD=4.0555;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:16:42.06:405,42,0	0/0:18,0:18:54.17:0,54,652	0/0:16,0:16:25.03:0,25,445	0/0:23,0:24:42.91:0,43,551	0/0:29,0:29:75.23:0,75,906	0/0:29,0:29:87.27:0,87,1050	0/0:13,0:13:30.08:0,30,350	0/0:38,0:38:84.25:0,84,1004	0/0:17,0:17:45.13:0,45,533	0/0:30,0:30:87.26:0,87,1043	0/0:30,0:30:81.15:0,81,945	0/0:16,0:16:42.13:0,42,507	0/0:32,0:32:87.27:0,87,1051	0/0:27,0:27:75.23:0,75,906	0/0:18,0:18:48.15:0,48,580	0/0:22,0:22:66.20:0,66,797	0/0:27,0:27:78.23:0,78,931	0/0:13,0:13:33.06:0,33,382	0/0:18,0:18:48.14:0,48,572	0/0:32,0:32:93.28:0,93,1113	0/0:23,0:23:63.19:0,63,761	0/0:25,0:25:75.23:0,75,901	0/0:37,0:37:99:0,99,1168	0/0:21,0:21:57.17:0,57,689	1/1:3,14:17:42.04:398,42,0	1/1:1,19:20:57.07:543,57,0	0/0:36,0:36:99:0,102,1216	1/1:2,8:10:21.03:203,21,0
chr10	79182192	.	TG	T	1243.46	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.169;DP=571;FS=2.136;HRun=1;HaplotypeScore=61.9058;InbreedingCoeff=0.8729;MQ=77.35;MQ0=0;MQRankSum=-0.200;QD=28.92;ReadPosRankSum=1.032;VQSLOD=3.4695;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:45.15:0,45,716	0/0:9,0:9:26.96:0,27,369	0/0:22,0:20:35.49:0,35,698	0/0:18,0:19:44.13:0,44,539	0/0:31,0:31:87.25:0,87,1307	0/0:31,0:31:93.26:0,93,1406	0/0:13,0:13:39.12:0,39,596	0/0:22,0:22:66.15:0,66,956	0/0:23,0:23:65.91:0,66,559	0/0:32,0:32:96.32:0,96,1511	0/0:22,0:22:65.90:0,66,837	0/0:19,0:19:57.18:0,57,872	0/0:19,0:19:57.17:0,57,877	0/0:21,0:21:63.21:0,63,993	0/0:21,0:21:60.18:0,60,904	0/0:24,0:24:72.23:0,72,1120	0/0:19,0:19:54.17:0,54,834	0/0:8,0:8:23.93:0,24,298	0/0:16,0:15:48.15:0,48,723	0/0:24,0:24:72.19:0,72,1088	0/0:18,0:18:54.17:0,54,833	0/0:17,0:17:51:0,51,746	0/0:29,0:29:84.27:0,84,1306	0/0:15,0:15:45.14:0,45,687	0/0:13,0:13:39.12:0,39,595	1/1:2,24:26:1.41:851,1,0	0/0:26,0:26:78.24:0,78,1192	1/1:0,17:17:36.12:500,36,0
chr10	79182193	.	G	GC	593.22	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.173;DP=568;FS=15.646;HRun=7;HaplotypeScore=64.3602;InbreedingCoeff=0.9579;MQ=76.03;MQ0=0;MQRankSum=0.694;QD=26.96;ReadPosRankSum=0.527;VQSLOD=2.6428;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:45.07:0,45,435	0/0:9,0:9:27.04:0,27,260	0/0:21,0:19:44.83:0,45,423	0/0:18,0:18:16.53:0,17,187	0/0:31,0:31:81.11:0,81,776	0/0:31,0:31:84.13:0,84,811	0/0:13,0:13:36.06:0,36,347	0/0:22,0:22:54.05:0,54,514	1/1:2,20:22:57.17:688,57,0	0/0:32,0:32:93.14:0,93,893	0/0:22,0:22:54.07:0,54,514	0/0:19,0:19:56.68:0,57,531	0/0:19,0:19:54.09:0,54,521	0/0:21,0:21:57.08:0,57,550	0/0:20,0:20:57.08:0,57,545	0/0:25,0:25:66.08:0,66,632	0/0:19,0:19:54.08:0,54,516	0/0:8,0:8:12.10:0,12,165	0/0:16,0:15:45.06:0,45,428	0/0:24,0:24:66.10:0,66,637	0/0:18,0:18:48.07:0,48,463	0/0:17,0:17:51.08:0,51,491	0/0:28,0:28:81.12:0,81,782	0/0:15,0:15:45.06:0,45,428	0/0:13,0:13:39.06:0,39,376	0/0:26,0:26:49.93:0,50,177	0/0:27,0:27:75.10:0,75,718	0/0:17,0:17:26.64:0,27,84
chr10	79183142	.	TG	T	3083.63	PASS	AB=0.515;AC=39;AF=0.750;AN=52;BaseQRankSum=-2.074;DP=274;FS=39.680;HRun=2;HaplotypeScore=107.2528;InbreedingCoeff=0.4293;MQ=33.14;MQ0=0;MQRankSum=0.702;QD=15.19;ReadPosRankSum=8.142;VQSLOD=1.0089;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:0,11:11:3.09:0,3,7	1/1:0,4:4:8.42:116,8,0	0/0:7,0:3:8.75:0,9,70	0/0:8,0:2:5.50:0,5,26	./.	0/1:0,5:5:0.24:33,0,0	1/1:0,11:11:11.18:168,11,0	1/1:0,16:16:48.16:622,48,0	0/1:0,9:9:1.20:32,0,1	1/1:0,18:18:54.17:694,54,0	1/1:0,12:12:3.01:39,3,0	1/1:2,4:6:9.03:104,9,0	1/1:4,7:11:9.02:103,9,0	0/0:0,7:7:0.15:0,0,1	1/1:1,10:11:7.36:114,7,0	1/1:0,9:9:1.19:68,1,0	1/1:2,5:7:7.19:85,7,0	1/1:0,2:2:6.02:78,6,0	1/1:0,7:7:18.06:234,18,0	0/0:0,19:19:0.47:0,0,1	./.	1/1:0,11:11:8.81:117,9,0	1/1:0,15:15:2.55:38,3,0	0/1:1,5:6:0:0,0,0	1/1:0,16:16:10.85:185,11,0	1/1:12,2:14:31.82:212,32,0	1/1:1,8:9:9.03:115,9,0	1/1:4,0:4:8.63:45,9,0
chr10	79183143	.	GGTACATAA	G	1153.80	PASS	AB=1.000;AC=11;AF=0.212;AN=52;BaseQRankSum=-5.146;DP=289;FS=11.527;HRun=0;HaplotypeScore=136.2281;InbreedingCoeff=0.3180;MQ=33.10;MQ0=0;MQRankSum=0.887;QD=15.59;ReadPosRankSum=1.310;VQSLOD=2.1494;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:3.12:0,3,6	0/0:5,0:5:9.49:0,9,97	0/0:7,0:3:9.03:0,9,120	0/0:9,0:2:3.01:0,3,46	./.	0/0:5,0:5:6.13:0,6,36	0/0:12,0:12:14.83:0,15,106	0/1:17,0:17:11.64:12,0,229	0/0:9,0:9:4.86:0,5,13	0/0:18,0:18:52.93:0,53,544	0/0:14,0:14:2.11:0,2,32	0/0:4,2:6:1.46:0,1,12	0/0:7,4:11:7.05:0,7,26	0/0:7,0:7:0.42:0,0,1	0/0:11,0:11:9.54:0,10,96	0/0:9,0:9:10.44:0,10,73	0/0:8,0:8:12.36:0,12,85	0/1:3,0:3:18.15:18,0,24	0/0:8,0:8:13.21:0,13,159	1/1:21,0:21:2.37:9,2,0	./.	0/0:11,0:11:8.49:0,8,88	0/0:15,0:15:2.53:0,3,29	1/1:6,0:6:0.47:1,0,0	0/0:18,0:18:14.56:0,15,44	1/1:2,12:14:11.19:964,11,0	0/1:9,0:8:2.57:3,0,82	1/1:0,4:4:9.03:272,9,0
chr10	79183149	.	TA	T	3411.41	PASS	AB=0.596;AC=46;AF=0.920;AN=50;BaseQRankSum=-2.954;DP=321;FS=11.903;HRun=2;HaplotypeScore=122.0794;InbreedingCoeff=0.2818;MQ=34.46;MQ0=1;MQRankSum=0.298;QD=12.36;ReadPosRankSum=0.893;VQSLOD=1.3613;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:0.17:1,0,0	1/1:0,5:5:9.02:94,9,0	0/1:5,4:4:30.09:102,0,30	0/0:13,0:5:5.87:0,6,36	./.	1/1:0,6:6:5.72:78,6,0	1/1:0,13:13:17.46:233,17,0	1/1:1,16:17:48.15:592,48,0	1/1:1,8:9:3.47:33,3,0	1/1:1,18:20:52.40:616,52,0	1/1:0,15:15:3.01:31,3,0	1/1:2,4:6:8.98:73,9,0	1/1:5,6:11:8.97:72,9,0	0/1:0,7:7:0:1,0,0	1/1:1,12:13:8.71:99,9,0	1/1:0,11:11:5.46:62,5,0	1/1:0,8:8:11.74:156,12,0	1/1:0,3:3:9.03:104,9,0	1/1:0,8:8:21.07:264,21,0	1/1:0,21:21:3:33,3,0	./.	1/1:0,17:17:15.04:195,15,0	1/1:1,17:18:5.78:77,6,0	./.	1/1:0,19:19:17.44:191,17,0	1/1:13,1:14:31.42:149,31,0	1/1:0,10:10:12.03:131,12,0	1/1:4,0:4:7.11:23,7,0
chr10	79183155	.	G	GTA	3488.31	PASS	AB=0.967;AC=34;AF=0.654;AN=52;BaseQRankSum=-1.139;DP=372;FS=0.973;HRun=0;HaplotypeScore=139.7391;InbreedingCoeff=0.5887;MQ=38.78;MQ0=2;MQRankSum=-2.624;QD=14.66;ReadPosRankSum=0.995;VQSLOD=3.6774;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,8:15:2.89:18,3,0	1/1:0,5:5:9.03:133,9,0	0/0:13,0:6:14.26:0,14,82	0/0:20,0:5:8.39:0,8,58	./.	0/0:6,0:6:6.02:0,6,79	0/0:13,0:13:18.06:0,18,236	1/1:8,15:23:57.02:822,57,0	1/1:2,7:9:2.53:44,3,0	1/1:2,18:20:53.19:889,53,0	1/1:0,16:16:5.35:94,5,0	1/1:2,0:6:8.88:58,9,0	1/1:5,0:10:8.87:56,9,0	1/1:3,0:9:0.72:2,1,0	1/1:2,13:15:11.76:174,12,0	1/1:2,12:14:8.98:140,9,0	0/0:10,0:10:16.40:0,16,200	1/1:2,3:5:9.03:137,9,0	1/1:7,2:9:17.94:207,18,0	1/1:4,20:24:2.77:45,3,0	./.	0/0:19,0:19:20.82:0,21,269	0/0:20,0:20:12.03:0,12,143	0/0:9,0:9:3:0,3,25	1/1:5,18:23:20.74:317,21,0	0/1:13,1:14:84.65:85,0,85	1/1:2,9:11:15.05:221,15,0	0/1:8,0:8:14.26:47,0,14
chr10	79186015	.	T	TAGA	12192.14	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-13.690;DP=753;FS=7.929;HRun=0;HaplotypeScore=99.4577;InbreedingCoeff=0.9958;MQ=80.69;MQ0=1;MQRankSum=-4.237;QD=57.24;ReadPosRankSum=4.014;VQSLOD=6.6643;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,41:46:99:2477,106,0	0/0:15,0:15:45.15:0,45,789	0/0:42,0:40:99:0,117,1904	0/0:22,0:22:38.48:0,38,825	0/0:22,0:22:66.23:0,66,1141	0/0:26,0:26:75.24:0,75,1290	0/0:36,0:36:99:0,105,1833	0/0:32,0:32:96.31:0,96,1628	1/1:1,27:28:66.23:1559,66,0	0/0:34,0:34:99:0,102,1759	0/0:21,0:21:57.20:0,57,1006	1/1:3,28:33:69.24:1630,69,0	1/1:1,28:30:75.26:1772,75,0	1/1:3,17:21:54.19:1264,54,0	0/0:27,0:27:78.27:0,78,1363	0/0:35,0:35:58.12:0,58,1668	0/0:25,0:25:63.15:0,63,1012	0/0:10,0:10:30.10:0,30,529	0/0:22,0:22:66.23:0,66,1155	0/0:24,0:24:69.24:0,69,1202	0/0:27,0:27:75.23:0,75,1256	0/0:20,0:20:60.17:0,60,972	0/0:23,0:23:66.23:0,66,1164	0/0:40,0:40:99:0,114,2004	1/1:2,21:23:60.21:1415,60,0	1/1:4,19:23:13.29:1436,13,0	0/0:35,0:35:99:0,105,1784	1/1:0,9:9:27.09:638,27,0
chr10	79187307	.	T	TC	769.52	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-1.462;DP=382;FS=2.396;HRun=7;HaplotypeScore=41.1473;InbreedingCoeff=0.9738;MQ=70.01;MQ0=0;MQRankSum=0.604;QD=16.03;ReadPosRankSum=2.031;VQSLOD=3.0046;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:12:26.62:325,27,0	0/0:9,0:9:24:0,24,219	0/0:8,0:8:11.73:0,12,109	0/0:12,0:12:14.90:0,15,154	0/0:26,0:26:66.08:0,66,629	0/0:22,0:22:60.98:0,61,582	0/0:10,0:10:30.05:0,30,289	0/0:37,0:37:69.07:0,69,658	0/0:14,0:14:36.05:0,36,348	0/0:25,0:25:63.08:0,63,604	0/0:11,0:11:30.04:0,30,289	0/0:7,0:7:21.03:0,21,203	0/0:19,0:19:51.07:0,51,491	0/0:13,0:13:36.06:0,36,347	0/0:12,0:12:24.02:0,24,232	0/0:7,0:7:18.02:0,18,174	0/0:6,0:6:18.03:0,18,174	0/0:9,0:9:27.04:0,27,261	0/0:12,0:12:30.04:0,30,290	0/0:23,0:23:66.09:0,66,631	0/0:10,0:10:27.02:0,27,255	0/0:9,0:9:27.04:0,27,260	0/0:11,0:11:27.03:0,27,255	0/0:7,0:7:21.03:0,21,203	1/1:1,14:15:33.10:399,33,0	1/1:3,0:10:20.13:102,20,0	0/0:15,0:15:36:0,36,329	1/1:2,0:11:20.09:102,20,0
chr10	79187552	.	TACACACAC	T	1476.33	PASS	AB=0.967;AC=30;AF=0.600;AN=50;BaseQRankSum=4.267;DP=374;FS=17.501;HRun=0;HaplotypeScore=92.6221;InbreedingCoeff=0.5004;MQ=50.85;MQ0=16;MQRankSum=-5.053;QD=7.81;ReadPosRankSum=-0.479;VQSLOD=0.4696;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:12:3:25,3,0	1/1:2,1:3:3.01:75,3,0	./.	./.	1/1:10,0:15:5.91:72,6,0	0/0:21,0:21:17.71:0,18,603	0/0:14,0:13:12.04:0,12,416	0/1:19,0:18:29.13:29,0,89	1/1:5,0:11:12.04:223,12,0	0/0:14,0:14:11.97:0,12,123	0/0:14,0:20:5.99:0,6,49	1/1:6,3:9:3.48:75,3,0	1/1:7,2:9:6.02:149,6,0	1/1:5,3:9:6.02:130,6,0	0/0:5,0:11:11.97:0,12,96	1/1:6,5:11:3.01:75,3,0	0/0:24,0:24:27.08:0,27,934	1/1:18,0:20:11.99:158,12,0	1/1:10,0:11:6.01:83,6,0	1/1:7,4:12:5.60:84,6,0	1/1:8,0:7:3.01:50,3,0	0/0:5,0:7:3.01:0,3,64	0/0:8,0:8:3.01:0,3,122	0/0:18,0:18:30.08:0,30,1002	1/1:9,0:13:6.02:112,6,0	0/1:13,0:14:56.46:108,0,56	1/1:3,8:12:9.03:200,9,0	./.
chr10	79187777	.	CTT	C	437.12	PASS	AB=0.560;AC=3;AF=0.054;AN=56;BaseQRankSum=3.807;DP=445;FS=0.000;HRun=7;HaplotypeScore=61.3512;InbreedingCoeff=0.6090;MQ=67.55;MQ0=1;MQRankSum=-1.111;QD=24.28;ReadPosRankSum=1.064;VQSLOD=2.1275;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39.09:0,39,648	0/0:15,0:15:42.10:0,42,702	0/0:14,0:14:34.35:0,34,538	0/0:14,0:14:17.20:0,17,328	0/0:26,0:26:65.93:0,66,982	0/0:16,0:16:45.15:0,45,783	0/0:13,0:13:33.11:0,33,564	0/0:35,0:35:78.22:0,78,1294	0/0:12,0:12:33.04:0,33,513	0/0:19,0:19:48.16:0,48,837	0/0:24,0:24:59.92:0,60,825	0/0:20,0:20:54.18:0,54,941	0/0:19,0:19:54.14:0,54,904	0/0:12,0:12:36.08:0,36,596	0/0:22,0:22:63.17:0,63,1039	0/0:23,0:23:69.19:0,69,1161	0/0:11,0:11:30.10:0,30,524	0/0:8,0:8:24.08:0,24,413	0/0:15,0:15:36.12:0,36,629	0/0:19,0:19:54.09:0,54,878	0/0:10,0:10:21.03:0,21,335	0/0:8,0:8:18.06:0,18,315	0/0:21,0:21:59.98:0,60,885	0/0:9,0:9:18.06:0,18,315	0/0:5,0:5:15.01:0,15,230	0/1:3,11:13:16.29:384,0,16	0/0:23,0:23:63.06:0,63,973	1/1:0,4:4:12.04:153,12,0
chr10	79188847	.	A	AG	91.79	PASS	AB=0.886;AC=4;AF=0.074;AN=54;BaseQRankSum=2.393;DP=305;FS=9.753;HRun=0;HaplotypeScore=49.8003;InbreedingCoeff=0.2881;MQ=71.29;MQ0=15;MQRankSum=0.566;QD=1.48;ReadPosRankSum=1.116;VQSLOD=0.4089;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,2:16:44.31:121,0,44	0/0:9,0:9:23.72:0,24,168	0/1:41,0:16:7.68:8,0,86	0/0:27,0:15:15.99:0,16,158	0/0:16,0:16:28.26:0,28,192	0/0:4,0:4:11.79:0,12,75	0/0:14,0:14:23.69:0,24,158	0/0:21,0:21:48.57:0,49,319	0/0:4,0:5:11.79:0,12,75	0/0:7,0:5:11.96:0,12,97	0/0:14,0:14:31.87:0,32,260	0/0:5,0:5:14.18:0,14,71	0/0:5,0:5:11.77:0,12,75	./.	0/0:6,0:6:14.81:0,15,98	0/0:7,0:7:13.48:0,13,92	0/0:15,0:15:32.30:0,32,234	0/0:9,0:9:20.66:0,21,160	0/0:24,0:20:52.21:0,52,397	0/0:4,0:4:11.96:0,12,103	0/0:6,0:4:6.01:0,6,56	0/0:7,0:7:17.88:0,18,147	0/0:5,0:5:8.94:0,9,67	0/0:7,0:6:12.02:0,12,137	1/1:2,2:3:6.02:63,6,0	0/0:6,0:6:16.94:0,17,122	0/0:13,0:13:24.66:0,25,169	0/0:6,0:5:11.97:0,12,96
chr10	79191243	.	G	GT	503.48	PASS	AB=0.563;AC=3;AF=0.054;AN=56;BaseQRankSum=-5.525;DP=602;FS=0.000;HRun=9;HaplotypeScore=58.7648;InbreedingCoeff=0.7011;MQ=80.37;MQ0=0;MQRankSum=-0.126;QD=19.36;ReadPosRankSum=-1.327;VQSLOD=3.3288;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,135,1172	0/0:19,0:19:56.99:0,57,495	0/0:18,0:18:38.93:0,39,325	0/0:14,0:15:28.69:0,29,225	0/0:25,0:25:59.96:0,60,521	0/0:21,0:21:56.96:0,57,491	0/0:21,0:21:47.97:0,48,416	0/0:27,0:27:56.95:0,57,491	0/0:27,0:27:74.96:0,75,647	0/0:31,0:31:65.78:0,66,573	0/0:23,0:23:58.22:0,58,518	0/0:18,0:18:44.99:0,45,391	0/0:24,0:24:53.97:0,54,469	0/0:30,0:30:62.95:0,63,547	0/0:25,0:25:62.94:0,63,539	0/0:23,0:23:59.97:0,60,517	0/0:20,0:20:50.99:0,51,442	0/0:18,0:18:47.96:0,48,412	0/0:12,0:12:26.99:0,27,234	0/0:23,0:23:59.95:0,60,517	0/0:20,0:20:50.99:0,51,443	0/0:18,2:21:10.81:0,11,311	0/0:19,1:20:20.80:0,21,409	0/0:9,0:9:26.99:0,27,234	0/0:15,1:16:8.80:0,9,305	1/1:3,14:17:39.11:431,39,0	0/0:22,0:22:53.94:0,54,463	0/1:2,7:9:5:178,0,5
chr10	79193344	.	T	TA	1183.56	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.405;DP=562;FS=4.597;HRun=1;HaplotypeScore=66.2380;InbreedingCoeff=0.8322;MQ=76.05;MQ0=0;MQRankSum=-6.615;QD=38.18;ReadPosRankSum=-0.454;VQSLOD=3.9613;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.26:0,93,1260	0/0:9,0:9:27.09:0,27,378	0/0:15,0:15:39.93:0,40,544	0/0:7,0:7:21.07:0,21,293	0/0:28,0:28:84.28:0,84,1174	0/0:31,0:31:93.31:0,93,1301	0/0:20,0:20:57.19:0,57,794	0/0:19,0:19:51.17:0,51,712	0/0:16,0:16:48.14:0,48,653	0/0:31,0:31:93.30:0,93,1285	0/0:22,0:22:63.21:0,63,880	0/0:19,0:19:57.19:0,57,796	0/0:26,0:26:78.25:0,78,1070	0/0:21,0:21:60.20:0,60,839	0/0:19,0:19:57.19:0,57,796	0/0:22,0:22:66.20:0,66,904	0/0:32,0:32:96.29:0,96,1320	0/0:15,0:15:45.11:0,45,607	0/0:18,0:18:51.17:0,51,709	0/0:24,0:24:72.24:0,72,1005	0/0:7,0:7:15.05:0,15,210	0/0:21,0:21:60.19:0,60,818	0/0:20,0:20:60.20:0,60,828	0/0:17,0:16:51.17:0,51,712	0/0:17,0:17:51.17:0,51,712	1/1:4,25:29:3.39:1186,3,0	0/0:23,0:22:69.23:0,69,956	1/1:0,2:2:6.02:96,6,0
chr10	79193353	.	ATAAT	A	1093.38	PASS	AB=0.551;AC=3;AF=0.054;AN=56;BaseQRankSum=7.910;DP=539;FS=5.419;HRun=0;HaplotypeScore=96.0496;InbreedingCoeff=0.4568;MQ=69.67;MQ0=0;MQRankSum=-8.005;QD=37.70;ReadPosRankSum=0.756;VQSLOD=3.5105;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.32:0,93,2410	0/0:10,0:10:27.09:0,27,707	0/0:9,0:9:6.49:0,6,158	0/0:4,0:4:6.02:0,6,112	0/0:30,0:30:75.26:0,75,1917	0/0:31,0:31:78.27:0,78,2044	0/0:18,0:18:48.16:0,48,1253	0/0:20,0:20:51.18:0,51,1304	0/0:16,0:16:48.16:0,48,1258	0/0:29,0:29:81.28:0,81,2091	0/0:18,0:18:45.15:0,45,1167	0/0:19,0:19:54.19:0,54,1375	0/0:21,0:21:51.15:0,51,1238	0/0:17,0:17:51.16:0,51,1270	0/0:22,0:22:63.20:0,63,1597	0/0:23,0:23:66.23:0,66,1719	0/0:32,0:32:84.29:0,84,2178	0/0:16,0:16:48.08:0,48,1116	0/0:18,0:18:48.16:0,48,1225	0/0:24,0:24:66.23:0,66,1723	0/0:9,0:9:24.08:0,24,628	0/0:19,0:19:54.17:0,54,1362	0/0:16,0:16:48.16:0,48,1211	0/0:17,0:16:42.14:0,42,1072	0/0:18,0:18:51.18:0,51,1323	0/1:5,22:27:9.39:1130,0,9	0/0:22,0:21:51.16:0,51,1254	1/1:1,1:2:3.01:55,3,0
chr10	79194789	.	A	AT	1201.78	PASS	AB=0.897;AC=5;AF=0.089;AN=56;BaseQRankSum=-6.007;DP=654;FS=0.509;HRun=11;HaplotypeScore=82.0463;InbreedingCoeff=0.7116;MQ=78.90;MQ0=1;MQRankSum=0.093;QD=14.66;ReadPosRankSum=-0.790;VQSLOD=3.8205;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,28:32:73.85:759,74,0	0/0:8,0:8:20.92:0,21,162	0/0:23,0:20:20.18:0,20,156	0/0:29,0:23:2.71:0,3,81	0/0:31,0:31:22.13:0,22,519	0/0:20,0:22:45.86:0,46,337	0/0:17,0:17:47.81:0,48,371	0/0:30,0:30:74.69:0,75,577	0/0:3,0:21:32.57:0,33,94	0/0:21,0:21:47.77:0,48,371	0/0:14,0:15:28.78:0,29,204	0/0:21,0:21:29.09:0,29,330	0/0:26,0:27:61.72:0,62,463	0/0:18,0:18:41.81:0,42,325	0/0:30,0:31:73.74:0,74,561	0/0:22,0:23:52.77:0,53,393	0/0:31,3:35:43.49:0,43,522	0/0:22,0:22:59.76:0,60,464	0/0:15,2:17:14.37:0,14,291	0/0:19,0:20:46.85:0,47,354	0/0:21,0:23:46.78:0,47,347	0/0:14,0:14:41.83:0,42,324	0/1:23,3:26:25.58:26,0,375	0/0:27,0:28:40.56:0,41,481	1/1:2,20:24:56.78:546,57,0	0/0:3,0:24:45.76:0,46,149	0/0:36,0:37:70.71:0,71,538	0/0:0,0:15:30.56:0,31,90
chr10	79196343	.	GT	G	3892.36	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.555;DP=696;FS=0.000;HRun=1;HaplotypeScore=65.8657;InbreedingCoeff=0.9993;MQ=83.17;MQ0=0;MQRankSum=-2.099;QD=36.72;ReadPosRankSum=3.694;VQSLOD=4.0789;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.23:0,72,1124	0/0:8,0:8:24.08:0,24,384	0/0:19,0:19:54.18:0,54,833	0/0:26,0:26:70.42:0,70,950	0/0:25,0:25:69.23:0,69,1092	0/0:27,0:26:81.28:0,81,1280	0/0:25,0:25:75.26:0,75,1199	0/0:29,0:29:87.30:0,87,1380	1/1:0,23:23:60.20:839,60,0	0/0:22,0:22:66.22:0,66,1045	0/0:13,0:13:39.13:0,39,611	1/1:0,27:27:72.24:1007,72,0	1/1:0,29:29:75.25:1039,75,0	1/1:0,27:27:72.24:1007,72,0	0/0:30,0:29:90.30:0,90,1401	0/0:36,0:36:99:0,108,1669	0/0:33,0:32:99:0,99,1547	0/0:11,0:11:33.11:0,33,527	0/0:17,0:17:51.15:0,51,790	0/0:21,0:21:63.21:0,63,984	0/0:46,0:46:99:0,138,2170	0/0:26,0:26:78.22:0,78,1166	0/0:18,0:18:51.15:0,51,769	0/0:28,0:28:84.27:0,84,1308	0/0:20,0:20:60.19:0,60,936	0/0:32,0:32:96.33:0,96,1533	0/0:33,0:33:99:0,99,1579	0/0:21,0:21:63.21:0,63,962
chr10	79199610	.	ATC	A	1970.08	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.682;DP=487;FS=7.791;HRun=0;HaplotypeScore=77.2182;InbreedingCoeff=0.9907;MQ=71.83;MQ0=0;MQRankSum=-7.194;QD=39.40;ReadPosRankSum=0.768;VQSLOD=5.0851;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:51.10:0,51,924	0/0:8,0:8:24.08:0,24,462	0/0:21,0:14:36.53:0,37,564	0/0:10,0:9:14.50:0,14,158	0/0:27,0:27:75.22:0,75,1344	0/0:7,0:7:21.07:0,21,405	0/0:13,0:13:39.13:0,39,749	0/0:36,0:36:99:0,105,1924	1/1:1,14:15:42.14:631,42,0	0/0:19,0:19:57.17:0,57,1057	0/0:15,0:15:36.12:0,36,680	1/1:1,10:11:33.11:500,33,0	1/1:3,5:8:21.07:314,21,0	1/1:0,16:16:45.15:685,45,0	0/0:20,0:20:57.18:0,57,1041	0/0:11,0:11:33.11:0,33,625	0/0:16,0:16:45.15:0,45,862	0/0:13,0:13:39.07:0,39,693	0/0:18,0:18:51.16:0,51,916	0/0:28,0:28:81.26:0,81,1499	0/0:17,0:17:51.14:0,51,937	0/0:19,0:19:57.16:0,57,1025	0/0:22,0:22:60.21:0,60,1140	0/0:16,0:16:48.16:0,48,905	0/0:19,0:18:33.05:0,33,615	0/0:24,0:24:69.24:0,69,1333	0/0:22,0:22:63.08:0,63,1190	0/0:11,0:11:21.07:0,21,405
chr10	79199620	.	CT	C	435.55	PASS	AB=0.947;AC=15;AF=0.268;AN=56;BaseQRankSum=6.956;DP=523;FS=2.915;HRun=13;HaplotypeScore=81.9903;InbreedingCoeff=0.6707;MQ=64.95;MQ0=2;MQRankSum=-4.445;QD=3.43;ReadPosRankSum=2.796;VQSLOD=0.6109;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:24:26.95:0,27,164	0/0:8,0:8:18.03:0,18,175	0/0:27,1:12:5.60:0,6,58	0/1:10,0:7:0.54:1,0,18	0/0:26,1:28:57.98:0,58,512	0/1:7,0:7:3.87:4,0,128	0/0:15,0:15:9.67:0,10,222	0/0:32,1:33:36.39:0,36,492	1/1:3,0:14:19.98:58,20,0	0/0:19,0:20:44.24:0,44,392	0/0:16,0:16:30.92:0,31,284	1/1:5,0:13:12.71:37,13,0	1/1:0,0:8:13.60:38,14,0	1/1:8,0:17:4.93:27,5,0	0/1:16,4:21:17.07:17,0,295	0/0:12,1:13:8.13:0,8,236	0/0:18,0:20:43.54:0,44,376	0/0:19,2:21:2.23:0,2,293	0/0:18,0:18:32.92:0,33,288	0/0:29,1:31:26.85:0,27,466	0/0:15,0:15:34.63:0,35,293	0/0:14,0:17:12.94:0,13,277	0/0:21,0:21:16.45:0,16,284	0/0:18,0:18:23.10:0,23,363	0/0:11,0:23:27.66:0,28,156	1/1:8,18:26:24.46:342,24,0	0/0:23,3:26:14.26:0,14,422	1/1:2,8:9:11.92:88,12,0
chr10	79199634	.	CT	C	854.77	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.680;DP=510;FS=0.629;HRun=13;HaplotypeScore=72.4886;InbreedingCoeff=0.9204;MQ=60.76;MQ0=16;MQRankSum=-7.504;QD=18.58;ReadPosRankSum=2.539;VQSLOD=4.2730;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:38.43:0,38,363	0/0:8,0:8:21.02:0,21,246	0/0:31,0:9:9.02:0,9,90	0/0:15,0:6:3:0,3,28	0/0:25,0:25:51.14:0,51,612	0/0:8,0:8:15.05:0,15,188	0/0:16,0:16:23.33:0,23,416	0/0:30,0:30:62.88:0,63,711	1/1:4,11:14:42.04:391,42,0	0/0:17,0:17:27.08:0,27,325	0/0:18,0:18:36.53:0,37,430	1/1:0,9:9:24.01:217,24,0	1/1:2,8:10:27:247,27,0	1/1:4,8:11:18:157,18,0	0/0:24,0:24:48.08:0,48,533	0/0:11,0:11:27.07:0,27,319	0/0:23,0:23:51.09:0,51,584	0/0:24,0:24:51.55:0,52,540	0/0:15,0:14:30.06:0,30,343	0/0:32,0:32:88.09:0,88,1020	0/0:15,0:15:27.09:0,27,340	0/0:16,0:16:42.05:0,42,473	0/0:20,0:20:39.12:0,39,480	0/0:16,0:16:39.12:0,39,484	0/0:24,0:24:36.02:0,36,393	0/0:20,0:20:47.57:0,48,432	0/0:25,0:25:63.13:0,63,715	0/0:9,0:8:12.01:0,12,112
chr10	79202598	.	TAAGGC	T	1615.74	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.674;DP=675;FS=3.195;HRun=0;HaplotypeScore=139.2778;InbreedingCoeff=0.9984;MQ=83.10;MQ0=0;MQRankSum=-9.641;QD=47.52;ReadPosRankSum=3.246;VQSLOD=4.0042;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:54.16:923,54,0	0/0:9,0:9:27.09:0,27,899	0/0:19,0:19:53.74:0,54,1518	0/0:23,0:22:63.19:0,63,1947	0/0:33,0:33:99:0,99,3202	0/0:21,0:21:63.20:0,63,2022	0/0:22,0:22:66.23:0,66,2027	0/0:30,0:30:87.30:0,87,2753	0/0:18,0:18:54.19:0,54,1798	0/0:36,0:36:99:0,108,3352	0/0:17,0:17:51.18:0,51,1682	0/0:22,0:22:66.23:0,66,2114	0/0:21,0:21:63.22:0,63,2065	0/0:27,0:27:81.28:0,81,2585	0/0:29,0:29:87.30:0,87,2715	0/0:21,0:21:63.22:0,63,2028	0/0:32,0:32:96.32:0,96,3073	0/0:44,0:44:99:0,132,4223	0/0:9,0:9:27.09:0,27,821	0/0:36,0:36:99:0,108,3448	0/0:33,0:33:96.33:0,96,3144	0/0:21,0:21:63.22:0,63,2047	0/0:21,0:21:63.22:0,63,1989	0/0:30,0:30:90.31:0,90,2875	1/1:0,16:16:45.15:814,45,0	0/0:26,0:26:78.26:0,78,2457	0/0:32,0:32:96.33:0,96,3195	0/0:9,0:9:27.09:0,27,862
chr10	79202608	.	CT	C	775.49	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.936;DP=661;FS=4.274;HRun=2;HaplotypeScore=88.4023;InbreedingCoeff=0.9954;MQ=80.65;MQ0=0;MQRankSum=-9.648;QD=22.16;ReadPosRankSum=2.205;VQSLOD=3.6797;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:54.51:507,55,0	0/0:10,0:10:30.10:0,30,450	0/0:15,0:15:36.08:0,36,489	0/0:26,0:24:54.83:0,55,698	0/0:32,0:32:93.31:0,93,1376	0/0:24,0:24:72.23:0,72,1059	0/0:22,0:22:66.22:0,66,989	0/0:27,0:27:78.26:0,78,1151	0/0:20,0:20:60.20:0,60,899	0/0:31,0:31:87.27:0,87,1222	0/0:16,0:16:48.16:0,48,717	0/0:20,0:20:60.19:0,60,879	0/0:17,0:17:48.16:0,48,719	0/0:32,0:32:96.31:0,96,1402	0/0:29,0:29:84.27:0,84,1223	0/0:21,0:21:63.19:0,63,907	0/0:32,0:32:96.33:0,96,1438	0/0:44,0:44:99:0,132,1908	0/0:13,0:13:33.10:0,33,471	0/0:29,0:29:87.29:0,87,1303	0/0:34,0:34:93.29:0,93,1372	0/0:22,0:22:63.21:0,63,942	0/0:19,0:19:54.18:0,54,808	0/0:29,0:29:84.28:0,84,1259	1/1:0,16:16:44.07:390,44,0	0/0:22,0:22:63.21:0,63,927	0/0:34,0:34:99:0,102,1507	0/0:6,0:6:18.06:0,18,270
chr10	79203590	.	GGAAT	G	7721.64	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=17.744;DP=740;FS=14.702;HRun=0;HaplotypeScore=164.6841;InbreedingCoeff=0.9999;MQ=76.08;MQ0=0;MQRankSum=-17.464;QD=49.82;ReadPosRankSum=3.041;VQSLOD=4.8470;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:31:59.87:1161,60,0	0/0:15,0:15:45.15:0,45,1233	0/0:32,0:32:96:0,96,2241	0/0:40,0:39:78.82:0,79,1957	0/0:29,0:28:84.29:0,84,2251	0/0:22,0:22:66.23:0,66,1757	0/0:17,0:17:48.16:0,48,1224	0/0:31,0:31:84.28:0,84,2113	1/1:0,27:27:75.26:1447,75,0	0/0:34,0:34:99:0,102,2776	0/0:19,0:19:57.19:0,57,1329	1/1:1,27:28:81.28:1563,81,0	1/1:2,25:27:75.26:1434,75,0	1/1:0,18:18:54.18:1019,54,0	0/0:35,0:35:99:0,102,2707	0/0:28,1:29:29.25:0,29,2090	0/0:32,0:32:96.33:0,96,2555	0/0:35,0:35:99:0,105,2795	0/0:13,0:13:39.13:0,39,991	0/0:25,0:25:75.26:0,75,2041	0/0:17,0:17:51.16:0,51,1327	0/0:24,0:24:72.25:0,72,1919	0/0:18,0:18:54.19:0,54,1418	0/0:43,0:43:99:0,123,3204	1/1:3,21:24:57.20:1099,57,0	0/0:25,0:25:75.25:0,75,1929	0/0:35,0:35:99:0,99,2483	0/0:15,0:15:45.15:0,45,1232
chr10	79203626	.	G	GACTGCCA	11599.80	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=14.394;DP=712;FS=2.314;HRun=0;HaplotypeScore=209.1486;InbreedingCoeff=0.9999;MQ=74.92;MQ0=0;MQRankSum=-14.737;QD=109.43;ReadPosRankSum=0.437;VQSLOD=5.4549;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:93.28:0,93,2291	0/0:14,0:14:42.14:0,42,1132	0/0:25,0:25:75.22:0,75,1789	0/0:27,0:27:78.27:0,78,1850	0/0:27,0:26:78.27:0,78,2103	0/0:18,0:18:54.17:0,54,1399	0/0:19,0:19:57.20:0,57,1512	0/0:33,0:33:96.30:0,96,2338	1/1:11,18:29:75.26:3047,75,0	0/0:36,0:36:99:0,108,2794	0/0:13,0:13:39.13:0,39,1051	1/1:8,24:33:96.33:3756,96,0	1/1:6,17:23:66.15:2491,66,0	1/1:4,16:21:60.21:2306,60,0	0/0:31,0:31:93.32:0,93,2402	0/0:29,0:29:81.28:0,81,2139	0/0:33,0:33:96.30:0,96,2454	0/0:27,0:27:75.26:0,75,1910	0/0:11,0:11:33.09:0,33,777	0/0:26,0:25:78.27:0,78,2053	0/0:18,0:18:51.17:0,51,1355	0/0:20,0:20:57.20:0,57,1502	0/0:18,0:18:48.16:0,48,1261	0/0:42,0:42:99:0,123,3261	0/0:27,0:27:69.24:0,69,1768	0/0:28,0:28:81.28:0,81,2156	0/0:29,0:29:84.29:0,84,2229	0/0:19,0:19:54.17:0,54,1391
chr10	79203906	.	TA	T	2171.16	PASS	AB=0.695;AC=25;AF=0.446;AN=56;BaseQRankSum=-3.154;DP=483;FS=14.594;HRun=15;HaplotypeScore=74.8315;InbreedingCoeff=0.2253;MQ=77.61;MQ0=2;MQRankSum=2.627;QD=6.98;ReadPosRankSum=3.566;VQSLOD=1.1855;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:12:20.26:0,20,120	0/1:1,4:6:9.50:66,0,10	0/0:35,0:22:7.94:0,8,121	0/1:24,2:18:9.25:9,0,88	0/1:9,17:26:37.47:230,0,37	0/1:12,4:17:35.41:35,0,188	0/0:12,0:14:25.75:0,26,224	1/1:12,19:33:25.96:260,26,0	0/0:6,0:7:13.78:0,14,63	1/1:7,16:24:48.34:300,48,0	0/1:5,12:18:12.20:177,0,12	0/0:11,0:16:28.75:0,29,167	0/0:9,0:18:37.24:0,37,204	0/0:9,0:13:35.17:0,35,227	1/1:7,9:16:20.55:134,21,0	1/1:2,10:13:2.32:133,2,0	0/1:16,2:19:2.75:3,0,206	1/1:1,17:18:27.44:268,27,0	1/1:8,1:11:2.49:67,2,0	1/1:3,15:19:37.37:236,37,0	1/1:6,7:13:11.01:76,11,0	0/0:14,2:17:0.29:0,0,231	0/0:13,1:15:0.66:0,1,136	0/0:8,2:10:1.67:0,2,127	0/0:7,0:15:19.09:0,19,115	0/1:6,16:22:23.78:224,0,24	0/1:7,9:17:50.14:90,0,50	0/1:6,6:12:37.01:44,0,37
chr10	79203978	.	T	TG	4130.07	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.423;DP=505;FS=10.073;HRun=1;HaplotypeScore=65.7018;InbreedingCoeff=0.9618;MQ=87.83;MQ0=1;MQRankSum=-4.748;QD=42.14;ReadPosRankSum=2.000;VQSLOD=3.7173;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:54.18:862,54,0	0/0:6,0:6:15.05:0,15,210	0/0:17,0:17:47.74:0,48,618	0/0:22,0:22:57.12:0,57,745	0/0:17,0:17:48.16:0,48,670	0/0:19,0:19:57.19:0,57,797	0/0:21,0:21:60.08:0,60,839	0/0:20,0:20:54.18:0,54,755	1/1:0,8:8:24.08:384,24,0	0/0:25,0:25:75.24:0,75,1034	0/0:17,0:17:48.16:0,48,671	1/1:1,13:14:36.12:572,36,0	1/1:3,20:23:57.01:901,57,0	1/1:0,14:14:42.14:668,42,0	0/0:20,0:20:60.19:0,60,817	0/0:19,0:19:51.16:0,51,696	0/0:30,0:30:90.30:0,90,1257	0/0:8,0:8:21.07:0,21,294	0/0:15,0:15:45.14:0,45,613	0/0:24,0:24:72.20:0,72,983	0/0:34,0:34:93.31:0,93,1300	0/0:13,0:13:36.12:0,36,503	0/0:16,0:16:48.16:0,48,671	0/0:17,0:17:48.13:0,48,645	1/1:2,16:17:48.15:743,48,0	0/0:16,1:17:3.18:0,3,621	0/0:16,0:16:48.16:0,48,667	0/0:14,0:14:39.13:0,39,545
chr10	79204051	.	CGTGGTGTGTGTGT	C	1625.58	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=9.383;DP=466;FS=14.482;HRun=0;HaplotypeScore=152.0599;InbreedingCoeff=0.5471;MQ=62.68;MQ0=26;MQRankSum=-6.764;QD=10.69;ReadPosRankSum=1.228;VQSLOD=1.8716;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:18:12.04:152,12,0	0/0:9,0:9:3.16:0,3,305	0/0:28,0:15:39.12:0,39,549	0/0:28,0:19:48.07:0,48,614	0/0:18,0:18:42.12:0,42,568	0/0:15,0:15:39.09:0,39,1449	0/0:20,0:20:51.16:0,51,1882	0/0:24,0:23:62.88:0,63,830	1/1:6,0:2:2.98:21,3,0	0/0:13,0:12:30.08:0,30,382	0/0:6,0:6:13.86:0,14,164	1/1:7,1:7:12.04:233,12,0	1/1:15,0:13:18.06:285,18,0	1/1:12,3:8:15.05:426,15,0	0/1:14,0:12:17.85:18,0,262	0/1:16,0:16:58.74:59,0,397	0/0:34,0:33:84.28:0,84,3133	0/1:15,0:15:99:116,0,178	0/0:14,0:14:14.81:0,15,428	0/0:20,0:19:5.90:0,6,393	0/0:28,0:27:36.08:0,36,471	0/0:7,0:7:21.07:0,21,784	0/0:10,0:10:21.07:0,21,545	0/0:23,0:22:63.17:0,63,2353	1/1:11,2:11:12.03:314,12,0	0/0:12,0:12:35.43:0,35,674	0/1:22,0:22:99:184,0,388	0/0:5,0:5:15.05:0,15,242
chr10	79204053	.	TG	T	593.74	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.647;DP=477;FS=28.043;HRun=2;HaplotypeScore=77.6871;InbreedingCoeff=0.9286;MQ=60.93;MQ0=32;MQRankSum=-4.399;QD=7.07;ReadPosRankSum=1.668;VQSLOD=-0.6294;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,17:17:12.04:152,12,0	0/0:10,0:10:26.12:0,26,325	0/0:28,0:15:39.13:0,39,521	0/0:26,0:18:48.07:0,48,587	0/0:18,0:18:42.12:0,42,545	0/0:16,0:16:42.54:0,43,543	0/0:22,0:21:50.87:0,51,690	0/0:24,0:23:62.85:0,63,814	1/1:4,3:2:2.98:21,3,0	0/0:12,0:11:30:0,30,377	0/0:8,0:7:15.05:0,15,199	1/1:2,6:7:11.93:130,12,0	1/1:3,11:12:18.06:229,18,0	1/1:6,9:8:14.44:120,14,0	0/0:15,0:13:29.05:0,29,341	0/0:16,0:16:40.26:0,40,451	0/0:33,0:32:82.83:0,83,1037	0/0:15,0:15:24.97:0,25,268	0/0:14,0:14:35.60:0,36,449	0/0:20,0:20:32.41:0,32,420	0/0:29,0:28:36.08:0,36,461	0/0:9,0:9:20.64:0,21,260	0/0:10,0:10:21.05:0,21,263	0/0:25,0:24:62.34:0,62,780	1/1:3,9:10:11.88:114,12,0	0/0:12,0:12:31.39:0,31,351	0/0:22,0:22:42.47:0,42,456	0/0:8,0:6:14.63:0,15,200
chr10	79204054	.	GGTGTGTGTGT	G	1819.02	PASS	AB=0.900;AC=28;AF=0.538;AN=52;BaseQRankSum=6.112;DP=485;FS=1.704;HRun=0;HaplotypeScore=130.3369;InbreedingCoeff=0.4458;MQ=59.32;MQ0=33;MQRankSum=-4.580;QD=7.16;ReadPosRankSum=-0.505;VQSLOD=2.6336;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:17:0:0,0,0	1/1:8,2:10:3.01:89,3,0	./.	./.	1/1:18,0:18:3.01:40,3,0	0/0:17,0:17:27.55:0,28,1008	0/0:22,0:21:30.10:0,30,1020	0/1:25,0:24:22.72:88,0,23	0/0:5,0:3:3.01:0,3,122	0/0:13,0:12:1.55:0,2,4	1/1:8,0:7:2.22:7,2,0	1/1:7,0:6:3:69,3,0	1/1:15,0:13:4.81:33,5,0	1/1:13,0:8:9.03:201,9,0	1/1:11,4:13:9.03:249,9,0	0/1:12,3:16:27.79:234,0,28	0/0:31,0:33:60.15:0,60,1755	1/1:9,5:15:12.04:284,12,0	1/1:11,3:14:6:113,6,0	1/1:14,6:20:8.94:128,9,0	0/0:23,7:28:0:0,0,0	0/0:9,0:11:15.05:0,15,442	0/0:9,0:10:9.03:0,9,217	0/0:24,0:25:45.12:0,45,1292	1/1:12,0:11:6.02:139,6,0	0/1:9,0:12:12.91:13,0,101	1/1:14,6:22:11.67:298,12,0	0/0:8,0:6:3.44:0,3,21
chr10	79220721	.	ATT	A	1877.45	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=8.767;DP=459;FS=0.000;HRun=10;HaplotypeScore=48.0880;InbreedingCoeff=0.9544;MQ=35.37;MQ0=96;MQRankSum=0.043;QD=17.71;ReadPosRankSum=-0.387;VQSLOD=1.3420;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:25:45.11:502,45,0	0/0:8,0:8:21.07:0,21,327	./.	./.	0/0:28,0:16:42.13:0,42,611	0/0:17,0:15:38.62:0,39,578	0/0:10,0:7:12.04:0,12,190	0/0:17,0:11:18.06:0,18,285	1/1:1,12:11:24.06:267,24,0	0/0:18,0:11:24.08:0,24,378	0/0:20,0:14:24.08:0,24,379	1/1:2,16:15:36.04:387,36,0	1/1:3,17:18:39.10:435,39,0	1/1:4,12:15:27.07:301,27,0	0/0:19,0:18:39.09:0,39,569	0/0:22,0:19:38.89:0,39,618	0/0:22,0:18:36.12:0,36,571	0/0:16,0:14:30.10:0,30,476	0/0:12,0:8:20.56:0,21,291	0/0:30,0:22:47.65:0,48,713	0/0:16,0:15:27.39:0,27,378	0/0:6,0:5:12.04:0,12,190	0/0:13,0:9:15.02:0,15,211	0/0:22,0:21:45.15:0,45,709	1/1:4,7:10:15.03:167,15,0	0/0:13,0:11:30.10:0,30,472	0/0:23,0:18:50.66:0,51,770	0/0:3,0:2:6.02:0,6,95
chr10	79223680	.	CTGTGTGTGTG	C	818.60	PASS	AB=0.760;AC=5;AF=0.096;AN=52;BaseQRankSum=2.639;DP=571;FS=35.151;HRun=0;HaplotypeScore=167.7550;InbreedingCoeff=0.6007;MQ=64.82;MQ0=6;MQRankSum=-4.712;QD=11.69;ReadPosRankSum=1.470;VQSLOD=1.4977;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:30:35.15:0,35,1230	0/0:10,0:10:6.02:0,6,242	./.	./.	0/0:20,0:17:6.49:0,6,242	0/0:23,0:33:21.07:0,21,918	0/0:13,0:17:18.05:0,18,712	0/0:29,0:29:22.87:0,23,558	0/0:15,0:17:20.93:0,21,894	0/0:28,0:27:52.53:0,53,1997	0/0:10,0:10:9.03:0,9,321	0/1:13,6:19:69.68:250,0,70	1/1:23,4:27:15.05:424,15,0	1/1:17,7:24:9.03:263,9,0	0/0:18,0:20:17.92:0,18,655	0/0:14,0:14:18.04:0,18,653	0/0:13,0:15:24.08:0,24,1012	0/0:14,0:21:16.30:0,16,616	0/0:17,0:17:14.07:0,14,481	0/0:22,0:21:14.97:0,15,549	0/0:12,0:12:21.07:0,21,860	0/0:20,0:21:30.10:0,30,1248	0/0:11,0:11:21.07:0,21,782	0/0:26,0:28:30.10:0,30,1207	0/0:21,0:22:35.71:0,36,1510	0/0:24,0:23:39.50:0,39,1491	0/0:20,0:21:15.52:0,16,621	0/0:7,0:6:5.96:0,6,260
chr10	79223706	.	G	GTGTGTGTG	2273.03	PASS	AB=1.000;AC=31;AF=0.596;AN=52;BaseQRankSum=-6.062;DP=617;FS=0.816;HRun=0;HaplotypeScore=148.3583;InbreedingCoeff=0.5178;MQ=50.76;MQ0=16;MQRankSum=-1.614;QD=6.44;ReadPosRankSum=-5.196;VQSLOD=0.8308;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:9.16:9,0,279	1/1:12,0:12:0.47:1,0,0	./.	./.	1/1:21,0:18:6.49:135,6,0	0/0:31,0:31:2.89:0,3,16	0/0:15,0:15:2.89:0,3,16	1/1:30,0:29:6.79:17,7,0	0/0:16,0:16:12.03:0,12,273	1/1:29,0:28:20.92:267,21,0	1/1:16,0:16:6.02:113,6,0	0/0:20,0:20:5.80:0,6,33	0/0:29,0:29:10.39:0,10,170	0/0:21,0:20:7.27:0,7,114	1/1:20,0:19:5.76:128,6,0	1/1:18,0:17:12.04:317,12,0	0/1:17,0:16:2.79:3,0,332	1/1:21,0:21:3.46:26,3,0	1/1:13,0:12:9.91:147,10,0	1/1:20,0:19:5.52:178,6,0	1/1:16,0:16:15.02:380,15,0	0/0:26,0:26:12.03:0,12,252	0/0:15,0:14:9.03:0,9,187	0/0:27,0:27:12.04:0,12,249	0/1:32,0:31:51.60:52,0,264	1/1:28,0:27:17.34:239,17,0	1/1:13,5:19:6.02:232,6,0	1/1:6,0:4:6.02:203,6,0
chr10	79226564	.	G	GTC	1953.86	PASS	AB=0.947;AC=27;AF=0.482;AN=56;BaseQRankSum=4.820;DP=569;FS=4.031;HRun=0;HaplotypeScore=132.2184;InbreedingCoeff=0.3393;MQ=48.66;MQ0=24;MQRankSum=-5.580;QD=5.78;ReadPosRankSum=0.588;VQSLOD=3.3420;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,1:31:14.91:195,15,0	0/1:9,0:9:7.05:90,0,7	0/0:31,0:7:10.89:0,11,63	0/1:72,0:13:1.43:1,0,50	1/1:13,2:14:9.02:121,9,0	0/0:28,0:27:66.18:0,66,826	0/0:24,0:24:47.54:0,48,606	0/1:22,0:21:99:125,0,188	1/1:14,0:12:8.61:58,9,0	0/1:11,2:12:11.09:139,0,11	0/1:13,2:14:0:0,0,0	0/0:25,0:21:32:0,32,395	0/0:26,0:24:46.80:0,47,592	0/0:16,0:15:24.61:0,25,346	1/1:9,2:11:9.02:120,9,0	1/1:14,2:15:8.77:131,9,0	0/0:25,0:25:53.69:0,54,668	0/1:23,0:23:80.92:157,0,81	0/1:9,0:9:36.56:50,0,37	0/1:13,2:15:17.13:143,0,17	1/1:11,2:12:12.04:164,12,0	0/0:12,0:12:24.06:0,24,298	0/0:24,0:23:51.14:0,51,647	0/0:20,0:19:44.81:0,45,556	1/1:14,0:13:6.02:81,6,0	0/1:14,2:15:99:171,0,105	1/1:21,2:20:2.04:336,2,0	1/1:5,0:5:3.81:57,4,0
chr10	79226572	.	CTG	C	1134.94	PASS	AB=0.871;AC=24;AF=0.429;AN=56;BaseQRankSum=6.411;DP=590;FS=1.045;HRun=0;HaplotypeScore=151.8977;InbreedingCoeff=0.0642;MQ=49.68;MQ0=24;MQRankSum=-3.445;QD=3.90;ReadPosRankSum=-2.564;VQSLOD=2.6885;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,11:32:0.48:68,0,0	0/1:7,3:10:38.24:62,0,38	0/0:40,0:14:2.37:0,2,189	0/0:82,0:18:30.77:0,31,271	1/1:16,2:17:8.98:72,9,0	0/0:26,0:25:69.17:0,69,1185	0/0:21,0:21:42.62:0,43,871	0/1:16,0:15:12.26:12,0,310	0/1:11,3:12:52.21:69,0,52	0/1:13,2:14:99:108,0,99	0/1:11,2:12:0.25:0,0,0	0/0:27,0:22:22.83:0,23,484	0/1:31,0:29:13.44:13,0,786	0/0:16,1:16:19.56:0,20,410	1/1:12,2:14:8.88:74,9,0	1/1:11,4:14:8.79:78,9,0	0/0:25,0:25:54.14:0,54,958	0/1:21,2:23:99:107,0,208	0/1:7,1:8:44.15:44,0,142	0/1:13,2:15:53.15:53,0,55	1/1:12,0:11:8.41:86,8,0	0/0:12,0:12:30:0,30,471	0/0:24,0:23:54.14:0,54,958	0/0:22,0:21:35.15:0,35,832	1/1:5,8:12:5.99:66,6,0	0/1:14,0:13:84.34:84,0,206	0/1:13,9:19:44.95:262,0,45	0/1:3,2:5:11.83:50,0,12
chr10	79226577	.	TCTCTCTCC	T	1707.96	PASS	AB=0.958;AC=24;AF=0.429;AN=56;BaseQRankSum=10.738;DP=602;FS=7.402;HRun=0;HaplotypeScore=187.9883;InbreedingCoeff=0.1521;MQ=50.20;MQ0=26;MQRankSum=-8.006;QD=6.06;ReadPosRankSum=-1.968;VQSLOD=1.0513;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,1:32:11.39:82,0,11	1/1:7,3:10:1.96:131,2,0	0/0:54,0:15:9:0,9,488	0/0:97,0:19:31.89:0,32,434	1/1:15,2:16:2.37:15,2,0	0/0:24,0:23:63.19:0,63,2369	0/0:19,0:20:51.16:0,51,1536	0/1:15,0:14:42.57:43,0,52	0/1:11,3:12:17.87:174,0,18	1/1:13,1:13:24.05:201,24,0	0/0:12,1:12:0.30:0,0,1	0/1:25,0:19:26.12:26,0,626	0/1:31,0:29:38.44:38,0,1087	0/0:17,0:16:18.86:0,19,606	1/1:12,1:13:2.88:29,3,0	0/1:14,1:14:1.46:48,0,1	0/0:23,0:23:59.10:0,59,2030	0/1:19,1:20:97.64:120,0,98	0/1:8,1:9:35.10:109,0,35	0/0:12,2:14:0.59:0,1,36	0/1:11,0:10:6.36:46,0,6	0/0:11,0:11:30.09:0,30,832	0/0:24,0:23:60.15:0,60,1715	0/0:21,0:20:51.17:0,51,1384	1/1:13,0:12:3.90:51,4,0	0/1:14,0:13:48.72:142,0,49	1/1:16,6:19:26.46:481,26,0	1/1:4,2:6:10.42:144,10,0
chr10	79226580	.	C	CTG	931.05	PASS	AB=0.919;AC=21;AF=0.375;AN=56;BaseQRankSum=7.058;DP=605;FS=11.424;HRun=0;HaplotypeScore=158.6433;InbreedingCoeff=-0.1028;MQ=50.85;MQ0=29;MQRankSum=-3.864;QD=2.80;ReadPosRankSum=-2.543;VQSLOD=1.5610;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,1:31:16.66:48,0,17	0/1:10,0:10:69.42:70,0,69	0/1:61,1:18:46.57:47,0,284	0/0:94,0:19:35.60:0,36,375	0/1:15,2:16:1.41:6,0,1	0/0:23,0:22:57.19:0,57,869	0/0:21,0:21:52.03:0,52,739	0/0:14,0:13:37.41:0,37,335	0/1:12,1:11:17.99:18,0,114	0/1:13,2:14:99:113,0,171	0/1:11,2:12:0:1,0,0	0/1:22,2:18:6.46:6,0,300	0/1:25,5:28:99:123,0,605	0/0:16,2:17:13.39:0,13,265	1/1:11,2:13:2.99:25,3,0	1/1:13,2:14:5.49:67,5,0	0/0:23,0:23:57.59:0,58,818	0/0:17,0:17:23.95:0,24,289	0/1:9,0:9:22:22,0,174	0/1:10,2:12:2.66:3,0,62	0/1:8,2:9:12.73:39,0,13	0/0:11,0:11:27.09:0,27,413	0/0:26,0:25:57.12:0,57,786	0/0:21,0:20:51.11:0,51,736	1/1:15,0:14:2.98:21,3,0	0/1:12,2:13:99:151,0,210	0/1:21,2:20:80.73:275,0,81	0/1:6,0:6:54.88:56,0,55
chr10	79226584	.	CCG	C	932.88	PASS	AB=0.967;AC=25;AF=0.446;AN=56;BaseQRankSum=9.817;DP=607;FS=1.079;HRun=0;HaplotypeScore=155.2777;InbreedingCoeff=0.3798;MQ=50.14;MQ0=32;MQRankSum=-6.867;QD=4.18;ReadPosRankSum=-3.726;VQSLOD=2.2605;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,10:27:4.43:28,4,0	0/1:10,0:10:13.61:41,0,14	0/0:70,1:19:17.92:0,18,464	0/0:103,3:20:26.39:0,26,441	1/1:16,0:15:2.84:15,3,0	0/0:22,0:21:60.18:0,60,1164	0/0:22,0:22:53.22:0,53,1039	0/1:13,0:12:94.51:96,0,95	0/1:13,0:11:28.28:28,0,54	1/1:12,3:14:12.92:206,13,0	0/1:13,0:12:0.24:0,0,0	0/0:23,0:17:21.14:0,21,217	0/0:31,0:29:34.35:0,34,476	0/0:16,0:15:18.47:0,18,203	1/1:12,2:14:4.46:49,4,0	1/1:9,4:12:5.84:48,6,0	0/0:23,0:23:59.55:0,60,1048	0/1:14,1:15:12.12:12,0,179	0/1:8,1:9:47.96:91,0,48	0/0:12,0:12:3.21:0,3,40	1/1:7,0:7:3:26,3,0	0/0:10,0:10:27.09:0,27,533	0/0:24,0:23:54.17:0,54,1004	0/0:23,0:22:51.13:0,51,883	1/1:9,6:14:2.50:24,3,0	0/1:12,1:12:74.75:75,0,105	1/1:20,2:19:37.38:256,37,0	1/1:4,2:6:15.47:120,15,0
chr10	79226588	.	CTCTCTG	C	2627.26	PASS	AB=0.971;AC=24;AF=0.429;AN=56;BaseQRankSum=6.206;DP=654;FS=3.966;HRun=0;HaplotypeScore=183.5262;InbreedingCoeff=0.7074;MQ=48.50;MQ0=40;MQRankSum=-9.162;QD=12.57;ReadPosRankSum=-4.173;VQSLOD=2.0747;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:0.69:1,0,2	1/1:8,2:10:15.93:178,16,0	0/0:79,0:19:38.43:0,38,661	0/0:118,0:20:20.88:0,21,608	0/0:16,3:18:0:0,0,0	0/0:23,0:23:62.98:0,63,1529	0/0:20,0:20:45.14:0,45,1190	1/1:17,0:16:45.04:668,45,0	0/0:12,0:10:8.26:0,8,149	1/1:16,1:16:25.15:545,25,0	0/1:13,2:14:0.45:0,0,0	0/0:25,0:19:22.74:0,23,447	0/0:33,0:31:16.42:0,16,655	0/0:19,0:18:5.90:0,6,279	1/1:12,1:13:2.57:58,3,0	1/1:16,0:15:6.80:87,7,0	0/0:26,0:25:63.14:0,63,1493	0/0:15,0:15:22.65:0,23,412	1/1:8,1:9:15.77:257,16,0	1/1:15,0:15:6.02:90,6,0	1/1:10,0:9:0.47:1,0,0	0/0:10,0:10:21.07:0,21,569	0/0:22,0:21:45.14:0,45,1174	0/0:24,0:23:45.06:0,45,849	0/1:17,0:16:0:0,0,1	0/1:12,0:11:18.63:138,0,19	1/1:18,5:20:36.59:583,37,0	1/1:6,0:6:14.02:205,14,0
chr10	79226594	.	G	GTC	824.23	PASS	AB=0.934;AC=20;AF=0.357;AN=56;BaseQRankSum=5.367;DP=663;FS=0.580;HRun=0;HaplotypeScore=169.1110;InbreedingCoeff=0.3405;MQ=48.91;MQ0=47;MQRankSum=-7.378;QD=3.52;ReadPosRankSum=-3.790;VQSLOD=1.5520;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,1:29:0.99:26,1,0	0/1:10,0:10:14.77:45,0,15	0/0:82,0:19:44.74:0,45,461	0/0:116,0:20:38.41:0,38,468	0/1:14,3:15:0:0,0,0	0/0:22,0:22:63.19:0,63,834	0/0:23,0:23:51.14:0,51,690	0/1:14,5:18:99:285,0,101	0/0:14,0:12:12.51:0,13,164	0/1:16,1:16:22.08:106,0,22	0/1:13,2:13:0:1,0,0	0/0:24,0:18:0.24:0,0,229	0/1:35,0:33:64.69:65,0,405	0/0:19,0:18:2.29:0,2,188	1/1:13,0:13:6.02:84,6,0	1/1:11,7:17:7.65:70,8,0	0/0:27,0:26:68.86:0,69,853	0/0:17,0:17:27.09:0,27,355	0/1:7,0:7:8.07:79,0,8	0/0:14,1:15:5.59:0,6,27	1/1:10,2:11:2.74:25,3,0	0/0:12,0:10:21.07:0,21,288	0/0:23,0:23:48.12:0,48,621	0/0:23,0:22:41.26:0,41,476	0/1:16,0:15:0.10:0,0,0	0/0:11,0:10:9.41:0,9,145	1/1:19,1:17:15.58:155,16,0	1/1:6,0:6:5.32:41,5,0
chr10	79226602	.	CTCAG	C	2129.48	PASS	AB=0.910;AC=20;AF=0.357;AN=56;BaseQRankSum=9.284;DP=651;FS=5.383;HRun=0;HaplotypeScore=167.0877;InbreedingCoeff=0.0458;MQ=49.68;MQ0=47;MQRankSum=-9.730;QD=7.89;ReadPosRankSum=-0.040;VQSLOD=2.5003;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:26:2.39:46,2,0	0/1:9,0:9:2.19:63,0,2	0/0:78,0:19:40:0,40,475	0/0:110,0:20:26.34:0,26,436	0/1:16,0:14:0.08:0,0,0	0/0:20,0:20:57.19:0,57,1051	0/0:23,0:24:56.77:0,57,1053	0/1:24,0:21:31.18:324,0,31	0/0:10,4:12:11.96:0,12,152	0/1:17,0:16:8.49:367,0,8	0/0:16,0:14:9.46:0,9,107	0/1:20,3:17:82.21:82,0,253	0/1:22,11:31:99:457,0,341	0/1:9,8:16:65.48:65,0,154	0/1:6,4:10:7.19:7,0,30	0/1:19,0:18:50.31:50,0,81	0/0:28,0:27:65.89:0,66,1187	0/0:20,0:20:8.21:0,8,345	0/1:8,0:8:56.19:140,0,56	1/1:12,0:12:6.01:59,6,0	0/0:13,0:12:6.01:0,6,87	0/0:14,0:12:14.30:0,14,400	0/0:22,0:22:48.15:0,48,897	0/0:22,0:21:41.47:0,41,681	1/1:18,1:18:2.31:46,2,0	1/1:9,0:8:10.38:107,10,0	0/1:19,0:16:38.38:264,0,38	0/1:7,1:8:29.35:215,0,29
chr10	79226604	.	CAG	C	1460.21	PASS	AB=0.788;AC=20;AF=0.357;AN=56;BaseQRankSum=9.162;DP=644;FS=10.025;HRun=0;HaplotypeScore=155.7517;InbreedingCoeff=-0.0300;MQ=50.05;MQ0=46;MQRankSum=-8.705;QD=5.37;ReadPosRankSum=0.368;VQSLOD=2.5234;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,11:25:2.62:13,3,0	0/1:2,7:9:14.59:62,0,15	0/0:77,0:19:41.21:0,41,494	0/0:105,1:20:36.11:0,36,445	0/1:11,5:14:0:0,0,0	0/0:21,0:21:59.57:0,60,984	0/0:26,0:26:60.49:0,60,923	0/1:12,10:19:78.95:299,0,79	0/0:14,0:11:11.96:0,12,136	0/1:9,8:16:47.62:318,0,48	0/0:10,6:14:8.69:0,9,105	0/1:21,2:17:7.91:8,0,255	0/1:30,3:31:99:156,0,342	0/1:17,0:16:28.73:29,0,154	0/0:7,3:10:5.04:0,5,37	0/1:14,6:19:41.77:42,0,109	0/0:28,0:27:64.12:0,64,987	0/0:18,0:18:3.31:0,3,206	0/1:7,2:9:80.64:133,0,81	1/1:4,8:12:6.01:59,6,0	0/0:11,1:11:5.79:0,6,112	0/1:14,0:12:12.85:13,0,331	0/0:21,1:22:37.60:0,38,783	0/0:21,1:21:8:0,8,482	1/1:15,4:18:1.86:12,2,0	1/1:2,6:7:10.39:127,10,0	0/1:10,9:16:61.14:229,0,61	0/1:4,4:8:17.91:122,0,18
chr10	79226606	.	GTC	G	417.99	PASS	AB=0.925;AC=22;AF=0.407;AN=54;BaseQRankSum=3.766;DP=663;FS=1.720;HRun=0;HaplotypeScore=164.5212;InbreedingCoeff=-0.3148;MQ=49.99;MQ0=46;MQRankSum=-2.361;QD=1.09;ReadPosRankSum=0.550;VQSLOD=2.8048;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:5.63:41,6,0	0/0:8,1:9:3.01:0,3,39	./.	0/0:101,0:17:0:0,0,0	0/1:13,0:14:0:0,0,0	0/1:20,2:22:8.80:9,0,227	0/1:24,3:27:98.25:98,0,278	0/0:23,0:20:5.33:0,5,26	0/0:16,0:13:6.02:0,6,66	0/1:15,1:17:22.69:23,0,146	0/1:15,1:14:24.10:24,0,56	0/0:23,0:17:0.54:0,1,9	0/1:37,0:35:11.70:12,0,37	1/1:17,0:16:2.50:9,2,0	0/0:11,0:11:8.94:0,9,81	0/1:18,3:20:57.28:57,0,133	0/1:28,3:30:26.11:26,0,378	0/1:7,1:20:21.07:21,0,66	0/1:10,0:10:35.85:54,0,36	0/1:13,0:13:0.26:0,0,0	0/0:10,3:12:5.79:0,6,89	0/1:12,1:12:24.10:24,0,29	0/1:18,4:22:14.80:15,0,166	0/1:19,3:21:68.28:68,0,242	1/1:14,0:18:1.81:11,2,0	0/1:10,0:9:13.05:13,0,57	0/1:18,0:16:49.66:50,0,96	0/0:7,0:9:5.07:0,5,73
chr10	79226612	.	C	CTG	624.11	PASS	AB=0.979;AC=10;AF=0.179;AN=56;BaseQRankSum=7.163;DP=672;FS=3.170;HRun=0;HaplotypeScore=165.6514;InbreedingCoeff=0.0440;MQ=45.81;MQ0=50;MQRankSum=-5.256;QD=3.69;ReadPosRankSum=0.543;VQSLOD=3.0538;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:3.46:12,3,0	0/0:11,0:11:11.56:0,12,97	0/0:64,0:13:20.56:0,21,209	0/0:92,0:16:6.60:0,7,96	0/0:19,0:17:2.58:0,3,18	0/0:23,0:23:65.97:0,66,624	0/0:29,0:29:71.93:0,72,712	0/0:26,0:22:58.81:0,59,388	0/1:16,0:13:16.15:16,0,59	0/0:19,0:18:28.18:0,28,367	0/0:16,0:14:8.25:0,8,90	0/1:21,2:17:96.31:103,0,96	0/1:37,2:37:99:514,0,112	0/1:17,0:16:40.98:41,0,53	0/0:11,0:11:8.85:0,9,114	0/0:23,0:22:27.47:0,27,288	0/0:28,0:27:61.07:0,61,662	0/1:20,0:20:20.63:21,0,99	0/0:12,0:11:28.93:0,29,234	0/0:15,0:15:8.54:0,9,69	0/0:15,0:13:5.79:0,6,91	0/0:15,0:13:26.61:0,27,211	0/0:29,0:29:59.91:0,60,549	0/0:23,0:22:41.97:0,42,423	1/1:19,0:18:0.55:2,1,0	0/0:11,0:10:23.67:0,24,183	0/0:22,0:17:28.20:0,28,247	0/1:10,0:9:45.63:46,0,91
chr10	79226701	.	T	TA	1124.89	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.745;DP=474;FS=2.068;HRun=9;HaplotypeScore=57.7793;InbreedingCoeff=0.9172;MQ=66.96;MQ0=1;MQRankSum=-2.875;QD=22.96;ReadPosRankSum=-2.100;VQSLOD=3.7215;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:50.94:0,51,435	0/0:4,0:4:12:0,12,104	0/0:12,0:12:21.96:0,22,158	0/0:12,0:10:2.07:0,2,54	0/0:29,0:29:80.95:0,81,695	0/0:22,0:22:62.97:0,63,543	0/0:27,0:27:71.92:0,72,612	0/0:37,0:36:83.92:0,84,721	1/1:0,7:7:21.06:232,21,0	0/0:18,0:18:50.98:0,51,443	0/0:18,0:18:50.97:0,51,440	1/1:0,11:10:30.08:332,30,0	1/1:5,14:19:45.11:487,45,0	1/1:1,11:11:21.04:232,21,0	0/0:16,0:16:38.98:0,39,339	0/0:19,0:19:41.98:0,42,364	0/0:15,0:15:32.98:0,33,286	0/0:15,0:15:38.95:0,39,332	0/0:17,0:17:41.97:0,42,361	0/0:28,0:28:77.97:0,78,677	0/0:10,0:10:29.99:0,30,260	0/0:11,0:11:26.99:0,27,234	0/0:18,0:19:50.02:0,50,423	0/0:11,0:11:17.99:0,18,156	0/0:20,0:20:50.99:0,51,443	0/0:20,0:19:50.98:0,51,440	0/0:19,1:20:23.83:0,24,436	0/0:4,0:4:9:0,9,78
chr10	79227760	.	G	GC	833.05	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.704;DP=681;FS=41.070;HRun=0;HaplotypeScore=93.8761;InbreedingCoeff=0.9855;MQ=59.31;MQ0=4;MQRankSum=-7.991;QD=15.72;ReadPosRankSum=-0.018;VQSLOD=1.8798;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,99,1360	0/0:6,0:6:18.06:0,18,251	0/0:30,0:27:63.44:0,63,1001	0/0:27,0:27:28.51:0,29,904	0/0:25,0:25:57.19:0,57,796	0/0:21,0:21:51.16:0,51,695	0/0:26,0:26:72.19:0,72,983	0/0:28,0:28:78.25:0,78,1074	1/1:0,13:11:27.09:354,27,0	0/0:29,0:29:87.28:0,87,1201	0/0:18,0:18:51.17:0,51,710	1/1:2,13:14:15.05:203,15,0	1/1:0,11:9:18.06:238,18,0	1/1:1,13:10:15.05:194,15,0	0/0:35,0:34:87.29:0,87,1210	0/0:23,0:23:60.17:0,60,817	0/0:34,0:34:90.27:0,90,1236	0/0:18,0:18:45.15:0,45,629	0/0:23,0:23:69.21:0,69,933	0/0:17,0:17:51.16:0,51,696	0/0:59,0:58:99:0,172,2390	0/0:28,0:28:72.16:0,72,949	0/0:23,0:23:56.91:0,57,796	0/0:31,0:31:84.19:0,84,1130	0/0:26,0:26:60.17:0,60,817	0/0:34,0:34:99:0,102,1383	0/0:19,0:19:51.11:0,51,671	0/0:8,0:8:24.08:0,24,335
chr10	79227764	.	T	TC	1114.30	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.875;DP=689;FS=39.296;HRun=3;HaplotypeScore=94.4402;InbreedingCoeff=0.9891;MQ=58.85;MQ0=6;MQRankSum=-7.889;QD=18.89;ReadPosRankSum=-1.423;VQSLOD=1.1157;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,99,1171	0/0:8,0:8:18.05:0,18,216	0/0:27,1:25:20.83:0,21,630	0/0:26,1:27:30.82:0,31,728	0/0:24,0:24:54.17:0,54,648	0/0:19,0:19:48.01:0,48,539	0/0:27,0:27:75.13:0,75,856	0/0:27,0:26:66.19:0,66,783	1/1:5,12:14:36.12:490,36,0	0/0:29,0:29:87.26:0,87,1035	0/0:18,0:18:48.07:0,48,549	1/1:2,13:14:21.07:288,21,0	1/1:2,9:9:15.05:205,15,0	1/1:3,13:11:21.07:290,21,0	0/0:35,0:35:87.13:0,87,996	0/0:25,0:25:63.14:0,63,738	0/0:35,0:34:90.21:0,90,1052	0/0:19,0:18:42.13:0,42,504	0/0:21,0:20:57.16:0,57,671	0/0:17,0:17:48.09:0,48,558	0/0:58,0:57:99:0,166,1979	0/0:27,0:27:66.20:0,66,792	0/0:23,0:23:56.89:0,57,674	0/0:33,0:33:46.28:0,46,954	0/0:25,0:25:57.03:0,57,636	0/0:36,0:36:99:0,108,1253	0/0:20,0:20:54.17:0,54,647	0/0:8,0:8:24.07:0,24,288
chr10	79228059	.	GAGAAGAGCTGTAACACTA	G	1088.18	PASS	AB=0.813;AC=29;AF=0.580;AN=50;BaseQRankSum=-0.475;DP=575;FS=2.035;HRun=0;HaplotypeScore=142.1169;InbreedingCoeff=0.5732;MQ=34.69;MQ0=75;MQRankSum=-0.435;QD=4.14;ReadPosRankSum=-0.545;VQSLOD=2.3269;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:22:17.99:0,18,189	1/1:6,0:6:6.02:72,6,0	./.	./.	1/1:16,0:16:8.94:88,9,0	0/0:20,0:18:12.04:0,12,143	0/0:28,0:10:5.93:0,6,53	0/0:35,0:7:0:0,0,0	0/0:33,0:28:11.45:0,11,86	0/1:20,6:24:21.96:183,0,22	1/1:16,0:16:11.95:122,12,0	./.	1/1:13,0:7:5.95:54,6,0	1/1:14,0:8:2.92:17,3,0	1/1:23,0:16:2.94:18,3,0	1/1:20,0:14:1.86:33,2,0	0/0:26,0:20:6.02:0,6,71	1/1:26,0:18:14.92:156,15,0	1/1:16,0:9:6.02:82,6,0	1/1:20,0:19:14.89:144,15,0	1/1:23,0:12:3.01:37,3,0	0/0:29,0:27:24.42:0,24,254	0/0:18,0:16:6.40:0,6,53	0/0:30,0:25:3.01:0,3,34	0/0:36,0:33:16.13:0,16,132	1/1:17,0:14:6.02:78,6,0	1/1:22,0:18:11.98:135,12,0	1/1:5,0:5:3.01:39,3,0
chr10	79228918	.	CAGTAGAAAAGGA	C	8876.79	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.985;DP=692;FS=1.452;HRun=0;HaplotypeScore=235.1705;InbreedingCoeff=0.9996;MQ=70.22;MQ0=1;MQRankSum=-13.731;QD=96.49;ReadPosRankSum=1.503;VQSLOD=4.9240;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.25:0,72,4299	0/0:9,0:9:27.09:0,27,1692	0/0:24,0:21:60.21:0,60,3358	0/0:25,0:25:72.21:0,72,3822	0/0:32,0:32:87.30:0,87,5158	0/0:24,0:24:72.25:0,72,3878	0/0:28,0:28:84.29:0,84,4872	0/0:26,0:26:78.26:0,78,4461	1/1:2,26:28:69.24:2647,69,0	0/0:25,0:25:75.26:0,75,4527	0/0:22,0:22:66.23:0,66,4079	1/1:0,21:21:53.69:2074,54,0	1/1:1,21:22:57.20:2198,57,0	1/1:1,20:21:51.18:1958,51,0	0/0:34,0:34:99:0,102,6035	0/0:29,0:29:78.27:0,78,4480	0/0:24,0:24:72.23:0,72,4201	0/0:28,0:28:81.28:0,81,4794	0/0:11,0:11:33.11:0,33,1919	0/0:22,0:22:66.23:0,66,3715	0/0:25,0:25:72.23:0,72,3885	0/0:36,0:36:99:0,102,6250	0/0:22,0:22:66.23:0,66,4021	0/0:30,0:30:90.31:0,90,5549	0/0:24,0:24:69.24:0,69,4141	0/0:25,0:25:72.25:0,72,4349	0/0:37,0:37:99:0,111,6694	0/0:13,0:13:39.13:0,39,2442
chr10	79229151	.	T	TTGTG	9422.82	PASS	AB=0.707;AC=34;AF=0.607;AN=56;BaseQRankSum=13.022;DP=761;FS=3.621;HRun=0;HaplotypeScore=178.1343;InbreedingCoeff=0.7226;MQ=57.10;MQ0=15;MQRankSum=-10.411;QD=20.44;ReadPosRankSum=-0.284;VQSLOD=4.6861;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:46:99:0,99,1588	1/1:2,0:9:20.10:303,20,0	0/0:48,0:27:38.46:0,38,430	0/0:39,0:26:26.62:0,27,368	1/1:13,2:23:17.09:242,17,0	0/0:28,0:29:66.12:0,66,963	0/0:34,0:34:63.19:0,63,993	1/1:19,2:28:39.11:602,39,0	1/1:9,12:21:45.15:1053,45,0	1/1:6,1:22:54.18:866,54,0	1/1:7,0:11:6.02:105,6,0	0/1:7,0:23:5.18:175,0,5	1/1:8,0:28:21.39:193,21,0	0/1:4,0:29:11.30:172,0,11	1/1:15,0:35:51.07:837,51,0	1/1:8,0:33:54.03:892,54,0	0/1:13,0:13:8.02:8,0,418	1/1:16,2:29:35.91:468,36,0	1/1:11,0:23:45.12:734,45,0	1/1:9,0:24:36.11:609,36,0	1/1:10,3:28:18.03:326,18,0	0/0:23,0:25:40.32:0,40,597	0/0:26,0:26:60.19:0,60,967	0/0:36,0:36:93.32:0,93,1534	0/0:17,0:17:30.08:0,30,450	1/1:28,0:26:47.95:532,48,0	1/1:14,1:37:68.77:1103,69,0	0/1:4,0:7:8.91:204,0,9
chr10	79229171	.	GGTACA	G	558.24	PASS	AB=0.891;AC=5;AF=0.089;AN=56;BaseQRankSum=4.058;DP=754;FS=1.665;HRun=0;HaplotypeScore=189.9386;InbreedingCoeff=-0.0980;MQ=56.61;MQ0=16;MQRankSum=-6.116;QD=5.53;ReadPosRankSum=-3.780;VQSLOD=1.9805;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:82.58:0,83,4166	0/1:9,0:9:76.93:77,0,311	0/0:56,0:31:93.32:0,93,2699	0/0:52,0:36:92.68:0,93,2540	0/0:19,0:20:32.61:0,33,808	0/0:27,0:27:81.22:0,81,2493	0/0:32,0:32:93.32:0,93,3054	0/0:31,0:31:43.63:0,44,2650	0/0:20,0:21:60.14:0,60,1425	0/0:21,0:21:45.33:0,45,1646	0/0:9,0:9:16.30:0,16,418	0/0:20,0:20:54.19:0,54,1344	0/0:25,0:25:24.53:0,25,1456	0/0:36,0:36:93.32:0,93,2536	0/0:26,0:27:54.51:0,55,1061	0/0:31,0:32:12.73:0,13,1473	0/0:18,0:18:51.18:0,51,1656	0/1:21,0:22:10.72:11,0,1438	0/0:19,0:19:54.17:0,54,1492	0/0:22,0:22:44.59:0,45,928	0/0:26,0:26:41.30:0,41,1070	0/0:18,0:18:49.41:0,49,1545	0/0:27,0:27:81.28:0,81,2678	0/0:43,0:43:99:0,129,4219	0/0:19,0:19:57.19:0,57,1782	0/1:11,10:20:99:385,0,927	0/1:34,0:34:53.07:53,0,1752	0/1:6,3:9:99:148,0,182
chr10	79230257	.	AC	A	2202.83	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=12.855;DP=779;FS=2.158;HRun=1;HaplotypeScore=104.3089;InbreedingCoeff=0.9979;MQ=95.21;MQ0=0;MQRankSum=-3.560;QD=31.03;ReadPosRankSum=2.572;VQSLOD=3.5569;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:44:99:1476,120,0	0/0:7,0:7:21.06:0,21,313	0/0:49,0:49:99:0,148,2331	0/0:27,0:27:79.80:0,80,1164	0/0:24,0:24:69.24:0,69,1100	0/0:27,0:27:81.28:0,81,1291	0/0:25,0:25:75.26:0,75,1196	0/0:35,0:35:99:0,99,1562	0/0:21,0:21:63.21:0,63,996	0/0:27,0:27:78.27:0,78,1245	0/0:25,0:25:75.20:0,75,1167	0/0:26,0:26:78.27:0,78,1247	0/0:32,0:32:93.30:0,93,1461	0/0:24,0:24:69.24:0,69,1103	0/0:36,0:36:99:0,108,1726	0/0:25,0:25:75.24:0,75,1173	0/0:28,0:28:84.26:0,84,1314	0/0:18,0:18:51.17:0,51,810	0/0:25,0:25:75.22:0,75,1147	0/0:25,0:25:72.25:0,72,1147	0/0:53,0:53:99:0,157,2466	0/0:23,0:23:69.24:0,69,1103	0/0:25,0:25:72.21:0,72,1123	0/0:30,0:29:87.30:0,87,1387	1/1:1,26:26:76.85:848,77,0	0/0:22,0:22:63.21:0,63,1007	0/0:35,0:35:99:0,105,1611	0/0:14,0:14:39.13:0,39,623
chr10	79230585	.	ATC	A	1058.11	PASS	AB=0.996;AC=22;AF=0.423;AN=52;BaseQRankSum=0.831;DP=534;FS=0.000;HRun=0;HaplotypeScore=108.0916;InbreedingCoeff=0.2631;MQ=63.57;MQ0=11;MQRankSum=2.217;QD=3.89;ReadPosRankSum=2.343;VQSLOD=2.4940;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:35.61:0,36,277	0/1:6,0:6:13.86:61,0,14	./.	0/0:20,0:15:2.60:0,3,10	1/1:19,0:19:26.84:201,27,0	0/0:19,0:18:8.97:0,9,71	0/0:19,0:19:4.53:0,5,230	0/1:25,0:23:9.96:39,0,10	0/1:15,0:14:6.57:7,0,128	1/1:14,0:14:23.99:209,24,0	1/1:24,0:23:18.69:126,19,0	0/0:15,0:15:23.94:0,24,210	0/0:22,0:22:26.96:0,27,246	0/0:11,0:10:14.92:0,15,125	./.	1/1:4,6:10:0.61:17,1,0	0/1:24,0:24:85.47:85,0,116	0/1:20,0:19:16.12:16,0,157	1/1:17,0:17:8.97:72,9,0	1/1:17,0:17:11.84:77,12,0	1/1:11,0:11:8.59:69,9,0	0/1:20,0:20:23.55:24,0,139	0/0:27,0:27:23.02:0,23,216	0/1:20,0:19:36.56:37,0,227	0/0:22,0:21:11.93:0,12,94	0/0:21,0:21:17.86:0,18,136	0/1:29,1:29:28.44:195,0,28	0/0:27,0:24:8.70:0,9,177
chr10	79230621	.	CTG	C	287.91	PASS	AB=1.000;AC=20;AF=0.385;AN=52;BaseQRankSum=3.324;DP=516;FS=0.000;HRun=0;HaplotypeScore=135.9746;InbreedingCoeff=0.3420;MQ=46.42;MQ0=32;MQRankSum=1.318;QD=1.20;ReadPosRankSum=-0.569;VQSLOD=2.4180;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:27:0.45:1,0,0	0/1:10,0:9:3.43:62,0,3	./.	./.	0/0:21,0:21:0.47:0,0,1	0/0:15,7:20:6.85:0,7,46	0/0:21,0:20:17.90:0,18,147	0/0:23,0:20:4.77:0,5,28	0/0:16,0:16:15.33:0,15,109	1/1:17,0:17:5.62:35,6,0	1/1:25,0:23:0.62:2,1,0	0/0:15,0:15:17.42:0,17,95	0/0:26,0:24:2.34:0,2,95	0/0:12,0:11:3.38:0,3,23	1/1:9,0:8:5.71:32,6,0	1/1:13,0:11:2.96:20,3,0	0/1:31,0:30:76.20:76,0,83	0/0:17,0:14:9.23:0,9,52	1/1:12,0:11:8.94:52,9,0	0/0:21,0:20:0.47:0,0,1	0/0:15,0:13:2.04:0,2,19	0/0:17,0:16:21.59:0,22,129	0/0:26,0:25:16.81:0,17,161	0/1:24,0:23:24.18:24,0,141	0/0:20,0:19:0.47:0,0,1	1/1:16,0:16:2.85:65,3,0	1/1:32,0:31:8.34:47,8,0	0/1:20,0:16:13:18,0,13
chr10	79230631	.	GTGTGTGTGTGTGTGTGTT	G	267.23	PASS	AB=0.995;AC=15;AF=0.288;AN=52;BaseQRankSum=1.494;DP=500;FS=6.735;HRun=0;HaplotypeScore=234.9706;InbreedingCoeff=-0.0211;MQ=46.40;MQ0=32;MQRankSum=-3.324;QD=1.10;ReadPosRankSum=-0.640;VQSLOD=1.4347;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,1:26:12.04:127,12,0	0/0:11,0:10:20.31:0,20,848	./.	./.	0/1:22,0:22:1.72:51,0,2	0/0:22,0:20:15.05:0,15,932	0/0:21,0:19:26.06:0,26,1035	0/1:24,0:21:60.68:61,0,319	0/0:16,0:15:8.07:0,8,914	0/1:16,0:16:38.50:39,0,554	0/0:25,0:24:14.08:0,14,139	0/1:14,0:13:3.35:3,0,363	0/1:26,0:25:27.94:28,0,204	0/0:13,0:12:10.35:0,10,598	0/0:11,0:10:8.06:0,8,227	0/1:12,0:10:13.61:14,0,144	0/0:28,0:27:39.09:0,39,2021	0/1:14,0:11:3.04:3,0,534	0/1:13,0:12:7.87:8,0,554	0/0:22,0:21:0.77:0,1,95	0/0:19,0:17:21.02:0,21,516	0/1:17,0:17:2.76:3,0,1430	0/0:25,0:24:24.03:0,24,1512	0/0:26,0:25:48.41:0,48,2492	1/1:14,4:16:1.03:3,1,0	0/0:16,0:16:8.10:0,8,917	0/1:21,0:21:1.52:2,0,228	0/1:17,0:13:64.58:65,0,418
chr10	79230641	.	GTGTGTGTT	G	1880.12	PASS	AB=0.963;AC=25;AF=0.463;AN=54;BaseQRankSum=2.449;DP=534;FS=2.182;HRun=0;HaplotypeScore=170.0290;InbreedingCoeff=-0.1001;MQ=47.18;MQ0=36;MQRankSum=-2.654;QD=5.01;ReadPosRankSum=-3.554;VQSLOD=1.6683;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:28:29.87:237,30,0	0/1:10,0:9:27.71:28,0,136	./.	0/0:12,0:2:5.47:0,5,26	0/1:5,16:21:1.67:51,0,2	0/0:21,0:19:15.93:0,16,357	0/0:22,0:20:34.46:0,34,546	1/1:27,0:25:39.03:326,39,0	0/1:15,0:14:30.82:31,0,303	0/1:21,0:21:21.65:260,0,22	1/1:24,0:23:11.67:67,12,0	0/1:16,0:15:74.11:74,0,118	0/1:24,0:23:29.02:29,0,99	0/1:13,0:12:53.57:54,0,164	0/1:11,0:10:4.40:4,0,20	0/1:12,0:10:14.43:56,0,14	0/0:25,0:24:19.26:0,19,825	0/1:14,0:11:93.38:93,0,115	0/1:13,0:12:50.24:50,0,82	1/1:28,0:27:13.46:94,13,0	0/1:20,0:18:54.94:90,0,55	0/0:17,0:16:1.02:0,1,510	0/0:23,0:22:24.03:0,24,687	0/0:31,0:30:62.08:0,62,1028	1/1:24,0:22:14.62:124,15,0	0/1:13,1:14:60.64:149,0,61	0/1:20,0:20:3.90:30,0,4	0/1:17,1:14:75.14:203,0,75
chr10	79230645	.	GTGTT	G	3019.68	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=4.317;DP=545;FS=0.455;HRun=0;HaplotypeScore=141.7288;InbreedingCoeff=0.0634;MQ=48.72;MQ0=36;MQRankSum=-0.846;QD=6.52;ReadPosRankSum=-0.249;VQSLOD=2.5003;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:28:35.63:281,36,0	1/1:10,0:9:1.74:136,2,0	0/0:11,0:1:2.92:0,3,17	0/1:13,0:3:2.41:2,0,18	0/1:18,0:18:1.83:51,0,2	0/1:18,0:16:4.35:4,0,171	0/0:24,0:22:43.23:0,43,431	1/1:27,0:25:47.13:408,47,0	0/1:17,0:16:76.02:76,0,96	1/1:21,0:21:30.54:351,31,0	1/1:24,0:23:11.67:67,12,0	0/1:16,0:15:49.34:98,0,49	0/1:20,0:19:29.56:30,0,63	0/1:13,0:13:59.29:76,0,59	1/1:11,0:10:5.99:78,6,0	1/1:14,0:12:17.11:138,17,0	0/0:25,0:24:20.80:0,21,411	0/1:15,0:12:10.97:136,0,11	0/1:14,0:13:10.85:195,0,11	1/1:29,0:28:13.65:96,14,0	0/1:19,0:17:7.77:90,0,8	0/1:21,0:19:13.85:14,0,286	0/0:22,0:21:23.77:0,24,362	0/1:34,0:33:6.22:6,0,532	1/1:25,0:22:17.82:149,18,0	1/1:16,1:17:28.92:377,29,0	1/1:4,15:19:14.55:120,15,0	0/1:18,0:14:6.56:215,0,7
chr10	79230647	.	GTT	G	3534.39	PASS	AB=0.966;AC=39;AF=0.696;AN=56;BaseQRankSum=4.777;DP=541;FS=0.000;HRun=3;HaplotypeScore=129.2976;InbreedingCoeff=0.1573;MQ=48.89;MQ0=34;MQRankSum=-1.754;QD=7.30;ReadPosRankSum=0.604;VQSLOD=0.0102;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:28:35.63:281,36,0	1/1:10,0:9:21.33:248,21,0	0/0:12,0:1:2.92:0,3,17	0/1:14,0:3:2.46:2,0,18	0/1:18,0:18:1.69:51,0,2	0/1:17,0:15:4.35:4,0,124	0/0:24,0:22:43.20:0,43,341	1/1:28,0:26:50.14:436,50,0	0/1:17,0:16:27.60:105,0,28	1/1:19,0:19:30.59:358,31,0	1/1:2,21:22:11.67:67,12,0	0/1:14,0:13:25.68:98,0,26	0/1:20,0:19:29.59:30,0,47	0/1:12,0:12:15.32:79,0,15	1/1:1,10:10:6.02:77,6,0	1/1:14,0:12:17.14:161,17,0	0/1:27,0:26:1.19:1,0,243	1/1:15,0:12:26.02:172,26,0	0/1:6,9:14:7.79:236,0,8	1/1:2,27:28:13.72:96,14,0	1/1:19,0:17:12.06:107,12,0	0/1:21,0:19:20.56:21,0,183	0/0:13,8:20:23.76:0,24,243	0/1:33,0:33:41.18:41,0,391	1/1:24,0:22:17.81:149,18,0	1/1:18,0:18:31.93:382,32,0	1/1:17,1:18:14.79:140,15,0	1/1:17,0:14:12.63:192,13,0
chr10	79231883	.	C	CTGTC	2851.15	PASS	AC=34;AF=0.654;AN=52;BaseQRankSum=9.743;DP=576;FS=3.348;HRun=0;HaplotypeScore=134.9713;InbreedingCoeff=0.8204;MQ=68.21;MQ0=12;MQRankSum=-6.163;QD=8.61;ReadPosRankSum=-1.774;VQSLOD=2.8185;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:26:32.90:264,33,0	1/1:8,0:8:11.91:111,12,0	0/0:38,0:23:38.09:0,38,360	0/0:40,0:23:38.77:0,39,410	0/0:14,0:14:0:0,0,0	0/0:20,0:20:45.07:0,45,617	0/0:23,0:23:44.93:0,45,479	1/1:46,0:42:84.49:813,84,0	1/1:13,0:12:9.79:123,10,0	1/1:28,0:27:71.51:559,72,0	./.	1/1:22,0:22:2.54:53,3,0	1/1:13,0:13:11.95:94,12,0	1/1:9,5:15:11.85:100,12,0	./.	1/1:18,0:17:5.56:55,6,0	0/0:17,0:17:29.96:0,30,286	1/1:7,0:6:2.88:15,3,0	1/1:15,0:15:26.87:209,27,0	1/1:17,0:17:2.94:18,3,0	1/1:23,0:21:14.91:113,15,0	0/0:13,0:13:24.02:0,24,296	0/0:13,0:13:17.80:0,18,194	0/0:31,0:31:53.95:0,54,663	1/1:26,0:25:8.61:74,9,0	1/1:13,0:13:20.87:182,21,0	1/1:31,0:30:12.01:180,12,0	1/1:5,0:5:11.87:81,12,0
chr10	79231895	.	C	CTGTCTG	3043.10	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=9.175;DP=624;FS=1.614;HRun=0;HaplotypeScore=153.1493;InbreedingCoeff=0.6997;MQ=54.56;MQ0=22;MQRankSum=-7.218;QD=7.28;ReadPosRankSum=-2.236;VQSLOD=2.5790;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:27:35.59:297,36,0	1/1:9,0:9:11.78:77,12,0	0/0:33,0:18:41.68:0,42,374	0/0:34,0:16:38.77:0,39,443	0/0:22,0:21:0:0,0,0	0/0:23,0:23:48.08:0,48,838	0/0:26,0:22:45.03:0,45,598	1/1:46,0:43:85.60:606,86,0	1/1:12,0:11:11.45:136,11,0	1/1:26,0:25:65.90:491,66,0	1/1:14,0:12:2.04:6,2,0	1/1:3,20:28:4.80:81,5,0	1/1:13,0:13:11.82:120,12,0	1/1:15,0:15:12.46:101,12,0	1/1:28,0:28:3.40:17,3,0	1/1:18,0:17:4.27:74,4,0	0/1:21,0:20:26.36:26,0,281	1/1:4,0:3:5.19:27,5,0	1/1:15,0:14:29.11:228,29,0	1/1:20,0:20:3.41:18,3,0	1/1:21,0:18:14.91:113,15,0	0/0:14,0:13:26.36:0,26,364	0/0:20,0:20:18.46:0,18,231	0/0:34,0:33:43.18:0,43,864	1/1:29,0:27:6.07:69,6,0	1/1:2,0:25:49.20:433,49,0	1/1:35,0:34:7.33:232,7,0	1/1:6,0:5:11.87:81,12,0
chr10	79231897	.	G	GTCTGTCTGTC	5570.36	PASS	AB=0.903;AC=26;AF=0.464;AN=56;BaseQRankSum=-1.392;DP=615;FS=13.246;HRun=0;HaplotypeScore=167.3865;InbreedingCoeff=0.3342;MQ=49.94;MQ0=22;MQRankSum=-5.382;QD=16.10;ReadPosRankSum=2.037;VQSLOD=3.3891;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,2:28:35.47:688,35,0	1/1:9,0:9:8.74:121,9,0	0/0:30,0:15:41.81:0,42,746	0/0:32,0:14:38.16:0,38,785	0/0:9,9:22:0:0,0,0	0/0:22,0:22:51.10:0,51,1275	0/0:26,0:22:48.13:0,48,1192	0/1:44,0:41:98.40:980,0,98	0/1:11,0:10:12.20:28,0,12	1/1:26,0:25:12.22:1313,12,0	0/0:10,4:14:2.94:0,3,18	0/1:25,0:25:1:1,0,4	0/1:14,0:14:19.84:20,0,37	0/1:15,0:15:10.49:10,0,72	0/0:12,10:29:4.08:0,4,23	1/1:10,7:17:3.26:146,3,0	0/0:21,0:20:38.11:0,38,678	1/1:4,0:3:6.02:103,6,0	1/1:15,0:14:6.09:440,6,0	0/1:8,10:19:10.54:48,0,11	1/1:20,0:17:15.04:285,15,0	0/0:15,0:14:30.53:0,31,727	0/0:22,0:22:22.58:0,23,454	0/0:33,0:32:64.72:0,65,1621	1/1:24,6:29:8.21:167,8,0	0/1:21,0:20:23.07:603,0,23	0/1:11,15:34:49.06:419,0,49	1/1:6,0:5:12.02:199,12,0
chr10	79231924	.	T	TGA	1314.68	PASS	AB=0.674;AC=37;AF=0.771;AN=48;BaseQRankSum=2.504;DP=509;FS=1.021;HRun=0;HaplotypeScore=119.2591;InbreedingCoeff=0.4719;MQ=41.42;MQ0=28;MQRankSum=-1.885;QD=3.46;ReadPosRankSum=-0.301;VQSLOD=2.7471;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:30:0.40:18,0,0	1/1:10,0:10:13.51:112,14,0	./.	./.	1/1:20,0:18:2.72:25,3,0	0/0:22,0:22:14.93:0,15,122	0/0:29,0:26:23.23:0,23,167	1/1:34,0:32:5.43:24,5,0	1/1:12,0:11:9:80,9,0	1/1:18,0:16:8.86:56,9,0	1/1:14,0:12:5.42:35,5,0	1/1:21,0:21:11.75:93,12,0	1/1:1,0:16:2.60:43,3,0	1/1:15,0:15:12.19:102,12,0	1/1:23,0:23:2.04:104,2,0	1/1:17,0:16:6.29:51,6,0	1/1:22,0:19:32.13:250,32,0	0/0:3,0:2:2.99:0,3,23	./.	1/1:8,0:8:2.83:25,3,0	1/1:9,0:6:2.91:25,3,0	0/0:16,0:15:11.87:0,12,97	0/0:21,0:21:5.58:0,6,33	0/1:15,13:28:29.96:30,0,96	1/1:31,0:28:2.74:12,3,0	1/1:19,0:18:23.13:165,23,0	1/1:30,0:29:27.29:214,27,0	./.
chr10	79231960	.	A	AGAGAGAG	449.33	PASS	AB=1.000;AC=10;AF=0.185;AN=54;BaseQRankSum=8.448;DP=668;FS=4.006;HRun=0;HaplotypeScore=155.9332;InbreedingCoeff=0.0007;MQ=64.10;MQ0=33;MQRankSum=-4.290;QD=2.01;ReadPosRankSum=1.570;VQSLOD=2.6165;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,32:39:8.86:60,9,0	0/1:15,0:15:93.83:94,0,142	0/0:44,0:21:46.95:0,47,584	0/0:56,0:24:59.73:0,60,721	0/1:22,0:20:7.83:8,0,278	0/0:26,0:26:57.18:0,57,880	0/0:22,0:19:48.65:0,49,851	0/0:37,0:34:35.94:0,36,1009	0/1:14,0:13:99:122,0,189	0/1:17,0:15:29.30:29,0,353	0/0:13,0:13:27.04:0,27,303	0/0:19,0:19:6.69:0,7,251	0/1:21,0:21:6.80:7,0,335	0/0:13,0:13:3.97:0,4,115	0/0:23,0:23:12.17:0,12,324	0/0:20,0:19:26.91:0,27,329	0/1:26,0:24:0.42:0,0,504	0/0:4,0:3:9.03:0,9,152	0/0:16,0:14:39.06:0,39,475	0/0:22,0:22:46.82:0,47,608	0/0:11,0:8:14.83:0,15,166	0/0:16,0:16:39.13:0,39,632	0/0:28,0:28:57.18:0,57,795	0/0:29,0:29:36.33:0,36,582	./.	0/1:30,0:29:39.53:40,0,500	0/1:33,0:32:99:226,0,490	0/0:13,0:12:36.07:0,36,427
chr10	79232678	.	T	TACACAC	2446.83	PASS	AB=1.000;AC=36;AF=0.720;AN=50;BaseQRankSum=2.721;DP=484;FS=18.587;HRun=0;HaplotypeScore=129.0966;InbreedingCoeff=0.5096;MQ=69.58;MQ0=20;MQRankSum=-0.562;QD=8.83;ReadPosRankSum=-2.462;VQSLOD=1.1582;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:1.88:65,2,0	1/1:7,0:7:8.55:56,9,0	./.	./.	1/1:19,0:18:14.78:160,15,0	0/0:26,0:26:11.83:0,12,373	0/0:17,0:17:2.83:0,3,51	1/1:20,0:18:5.84:35,6,0	0/1:15,0:14:3.91:4,0,118	1/1:23,0:21:27.05:414,27,0	1/1:13,0:13:7.15:95,7,0	1/1:16,0:16:21.08:309,21,0	1/1:7,0:7:3.48:50,3,0	1/1:12,0:12:11.81:197,12,0	0/1:15,0:15:8.37:152,0,8	1/1:17,0:17:0.14:170,0,0	0/0:14,0:14:12.04:0,12,238	1/1:12,0:11:3.01:63,3,0	1/1:9,0:9:8.92:124,9,0	1/1:22,0:22:12.96:167,13,0	1/1:17,0:17:10.16:100,10,0	0/0:21,0:21:1:0,1,191	0/0:15,0:15:12.02:0,12,212	0/0:21,0:21:29.74:0,30,512	./.	1/1:15,0:12:13.15:90,13,0	1/1:20,0:20:7.07:236,7,0	1/1:5,0:4:6.02:120,6,0
chr10	79232722	.	CAGAGAG	C	4070.88	PASS	AB=0.948;AC=27;AF=0.482;AN=56;BaseQRankSum=1.538;DP=487;FS=26.773;HRun=0;HaplotypeScore=125.9106;InbreedingCoeff=0.4213;MQ=47.74;MQ0=17;MQRankSum=2.886;QD=13.89;ReadPosRankSum=-1.544;VQSLOD=0.9898;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:9.03:0,9,164	1/1:9,0:9:8.01:130,8,0	0/0:6,0:3:9.03:0,9,133	0/0:6,0:4:6.02:0,6,107	1/1:23,2:25:15.52:309,16,0	0/0:24,0:24:29.52:0,30,611	0/0:7,0:7:9.03:0,9,225	1/1:22,11:30:1.34:536,1,0	0/0:19,0:16:22.38:0,22,305	0/1:23,0:23:89.30:218,0,89	1/1:19,0:20:5.88:381,6,0	0/1:14,0:14:3.19:114,0,3	1/1:8,0:8:8.49:148,8,0	0/1:11,2:13:29.48:218,0,29	1/1:16,0:18:7.64:381,8,0	0/1:15,0:15:16.31:92,0,16	0/0:20,0:19:20.18:0,20,828	0/1:16,0:14:0:0,0,0	1/1:10,0:11:11.95:171,12,0	1/1:21,0:22:16.42:272,16,0	0/1:14,0:12:30.66:156,0,31	0/0:25,0:24:19.28:0,19,955	0/0:26,0:24:32.52:0,33,729	0/0:25,0:25:36.09:0,36,841	0/0:20,0:19:9.03:0,9,225	1/1:16,0:15:10.97:507,11,0	0/1:24,2:27:29.90:329,0,30	1/1:5,0:4:6.02:109,6,0
chr10	79232749	.	AGAGAGAGT	A	381.19	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=9.231;DP=481;FS=15.977;HRun=0;HaplotypeScore=155.0631;InbreedingCoeff=-0.2781;MQ=62.45;MQ0=11;MQRankSum=1.189;QD=1.56;ReadPosRankSum=7.704;VQSLOD=1.0082;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:23.99:0,24,390	0/1:10,0:10:6.79:7,0,143	0/0:21,0:16:30.20:0,30,616	0/0:24,0:19:27.43:0,27,755	0/1:20,0:20:15.94:16,0,222	0/0:24,0:24:46.99:0,47,1127	0/0:7,0:7:18:0,18,489	0/1:32,0:31:20.84:21,0,454	0/0:17,0:15:33.95:0,34,732	0/1:19,0:19:43.56:44,0,339	0/1:19,0:19:33.86:34,0,95	0/1:12,0:12:8.64:9,0,229	0/1:10,0:10:4.94:5,0,164	0/1:13,0:13:62.26:62,0,176	0/1:17,0:17:69.60:70,0,146	0/1:9,0:9:48.39:48,0,98	0/0:21,0:20:53.99:0,54,1421	1/1:2,7:8:3:26,3,0	0/0:15,0:14:25.34:0,25,299	0/1:18,0:18:44.89:45,0,231	0/1:9,0:7:51.81:52,0,111	0/0:28,0:27:63.06:0,63,1715	0/0:23,0:21:49.83:0,50,1482	0/0:19,0:19:44.97:0,45,1311	0/0:22,0:21:33.50:0,33,659	0/1:20,0:19:29.48:29,0,213	0/1:22,0:22:65.60:66,0,255	0/1:5,0:4:5.14:5,0,20
chr10	79234149	.	TTATTTGGG	T	2255.68	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.952;DP=640;FS=1.469;HRun=0;HaplotypeScore=156.0826;InbreedingCoeff=0.9996;MQ=82.41;MQ0=0;MQRankSum=-9.257;QD=50.13;ReadPosRankSum=1.004;VQSLOD=3.5959;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,17:22:36.04:798,36,0	0/0:12,0:12:36.12:0,36,1544	0/0:20,0:20:51.17:0,51,2039	0/0:19,0:19:45.15:0,45,1638	0/0:40,0:40:99:0,108,4576	0/0:29,0:29:87.30:0,87,3658	0/0:25,0:25:69.24:0,69,2786	0/0:35,0:35:93.31:0,93,3676	0/0:21,0:21:57.18:0,57,2339	0/0:23,0:23:60.20:0,60,2479	0/0:26,0:26:72.25:0,72,3005	0/0:19,0:19:45.15:0,45,1858	0/0:19,0:19:54.19:0,54,2262	0/0:16,0:16:48.16:0,48,2000	0/0:21,0:21:57.20:0,57,2481	0/0:23,0:23:66.23:0,66,2724	0/0:21,0:21:63.20:0,63,2541	0/0:27,0:27:78.27:0,78,3178	0/0:15,0:15:36.12:0,36,1476	0/0:29,0:29:78.27:0,78,3311	0/0:23,0:23:63.22:0,63,2603	0/0:22,0:22:63.22:0,63,2677	0/0:15,0:15:39.13:0,39,1689	0/0:14,0:14:36.12:0,36,1522	1/1:1,22:23:57.20:1579,57,0	0/0:38,0:38:99:0,111,4658	0/0:30,0:29:90.30:0,90,3719	0/0:13,0:13:39.13:0,39,1618
chr10	79238123	.	G	GTTATTATTATTATTA	6428.85	PASS	AB=0.625;AC=29;AF=0.604;AN=48;BaseQRankSum=-1.555;DP=238;FS=12.584;HRun=0;HaplotypeScore=88.9575;InbreedingCoeff=0.5650;MQ=53.97;MQ0=0;MQRankSum=-4.706;QD=38.27;ReadPosRankSum=-1.661;VQSLOD=2.6327;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:3.01:86,3,0	1/1:1,5:6:6.02:431,6,0	0/0:5,0:5:5.94:0,6,107	0/0:4,0:3:6.02:0,6,128	1/1:11,2:13:15.03:701,15,0	0/0:12,0:12:30.10:0,30,1153	0/0:5,0:5:3.01:0,3,123	1/1:45,0:43:33.09:1222,33,0	0/0:2,0:5:9.03:0,9,137	1/1:2,6:9:18.04:553,18,0	1/1:6,0:6:3.01:75,3,0	1/1:8,0:8:3.01:187,3,0	1/1:2,0:2:3.01:195,3,0	./.	./.	0/1:2,0:5:38.37:130,0,38	0/0:19,0:19:48.12:0,48,1737	1/1:7,3:14:6.02:304,6,0	1/1:11,2:18:23.94:585,24,0	1/1:3,0:3:3:25,3,0	./.	0/0:2,0:2:3.01:0,3,126	0/0:3,0:3:3.01:0,3,121	0/0:5,0:5:9.03:0,9,282	1/1:8,0:8:6.01:210,6,0	./.	1/1:9,8:18:12.04:863,12,0	1/1:2,4:8:12.04:863,12,0
chr10	79238326	.	C	CTTT	2596.78	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.904;DP=456;FS=0.622;HRun=2;HaplotypeScore=60.3466;InbreedingCoeff=0.9938;MQ=90.61;MQ0=0;MQRankSum=-1.287;QD=59.02;ReadPosRankSum=3.118;VQSLOD=3.7535;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,2408	0/0:6,0:6:18.06:0,18,317	0/0:22,0:22:65.96:0,66,903	0/0:17,0:17:47.99:0,48,688	0/0:9,0:9:24.07:0,24,394	0/0:15,0:15:45.15:0,45,793	0/0:19,0:19:57.14:0,57,893	0/0:16,0:16:45.14:0,45,763	0/0:16,0:16:48.15:0,48,806	0/0:21,0:21:60.17:0,60,968	0/0:12,0:12:36.10:0,36,572	1/1:0,12:12:36.12:851,36,0	1/1:0,18:20:51.18:1180,51,0	1/1:0,12:12:30.10:709,30,0	0/0:21,0:21:63.08:0,63,1035	0/0:13,0:13:36.11:0,36,588	0/0:23,0:23:69.21:0,69,1158	0/0:10,0:10:27.08:0,27,441	0/0:19,0:19:57.15:0,57,884	0/0:13,0:13:39.13:0,39,687	0/0:10,0:10:30.07:0,30,465	0/0:12,0:12:36.11:0,36,596	0/0:19,0:19:57.17:0,57,946	0/0:20,0:20:60.17:0,60,991	0/0:10,0:10:30.09:0,30,500	0/0:13,0:13:36.12:0,36,610	0/0:22,0:21:63.14:0,63,1029	0/0:7,0:7:20.94:0,21,246
chr10	79239972	.	CGTGT	C	3642.36	PASS	AB=0.770;AC=35;AF=0.648;AN=54;BaseQRankSum=2.415;DP=524;FS=2.681;HRun=0;HaplotypeScore=91.4511;InbreedingCoeff=0.6169;MQ=71.63;MQ0=7;MQRankSum=-0.958;QD=11.10;ReadPosRankSum=1.006;VQSLOD=2.9714;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:19:8.24:0,8,43	1/1:4,4:9:15.04:217,15,0	./.	0/0:25,0:15:3.01:0,3,44	1/1:11,11:22:21.02:284,21,0	0/1:17,1:19:8.10:8,0,716	0/0:11,0:11:12.04:0,12,282	1/1:19,3:21:3:26,3,0	0/0:10,0:14:11.23:0,11,61	1/1:12,9:21:18.05:275,18,0	1/1:5,9:14:21.07:331,21,0	1/1:9,9:18:18.06:283,18,0	1/1:11,8:20:12.04:189,12,0	1/1:13,5:18:12.04:189,12,0	0/1:11,3:23:78.46:110,0,78	1/1:0,9:9:17.89:250,18,0	0/0:23,0:28:45.70:0,46,810	1/1:8,7:15:13.62:206,14,0	1/1:14,0:14:6.01:75,6,0	1/1:8,6:14:18.06:283,18,0	1/1:19,9:29:8.30:236,8,0	0/0:21,0:24:20.79:0,21,362	0/0:20,0:20:21.07:0,21,488	0/0:21,0:24:47.86:0,48,975	0/1:11,1:19:29.21:29,0,41	1/1:5,12:17:17.21:388,17,0	1/1:15,5:22:15.04:217,15,0	1/1:2,1:3:2.52:46,3,0
chr10	79241319	.	A	AACAC	1740.44	PASS	AB=0.850;AC=28;AF=0.538;AN=52;BaseQRankSum=5.129;DP=573;FS=6.015;HRun=0;HaplotypeScore=136.4376;InbreedingCoeff=0.6878;MQ=67.01;MQ0=15;MQRankSum=-4.699;QD=6.93;ReadPosRankSum=-1.049;VQSLOD=2.0908;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:6.22:0,6,449	1/1:5,0:5:3.01:48,3,0	./.	./.	1/1:10,7:17:1.16:26,1,0	0/0:34,0:33:62.68:0,63,869	0/0:28,0:27:42.07:0,42,553	1/1:26,0:26:7.29:34,7,0	1/1:22,0:22:15.04:136,15,0	1/1:12,3:16:16.12:335,16,0	1/1:8,10:20:2.89:34,3,0	1/1:24,0:23:8.56:117,9,0	0/0:14,0:14:1.78:0,2,12	0/1:16,0:16:0.12:0,0,0	0/0:19,0:19:12.01:0,12,124	1/1:20,0:20:27.05:369,27,0	0/0:23,0:23:27.98:0,28,413	0/0:5,0:5:0.47:0,0,1	1/1:10,0:10:3.45:22,3,0	1/1:9,7:19:14.96:208,15,0	0/1:12,0:20:4.82:62,0,5	0/0:18,0:19:21.06:0,21,300	0/0:20,0:19:28.35:0,28,341	0/0:30,0:29:44.97:0,45,552	0/0:21,0:21:23.86:0,24,203	1/1:14,0:14:17.03:173,17,0	1/1:10,3:14:15.02:264,15,0	1/1:1,1:4:8.94:93,9,0
chr10	79241332	.	A	ATG	110.31	PASS	AB=0.779;AC=3;AF=0.054;AN=56;BaseQRankSum=4.949;DP=559;FS=5.101;HRun=0;HaplotypeScore=129.0221;InbreedingCoeff=-0.0709;MQ=50.07;MQ0=17;MQRankSum=-4.016;QD=2.01;ReadPosRankSum=-0.840;VQSLOD=1.8338;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:35:85.13:0,85,1166	0/0:5,0:5:2.67:0,3,25	0/0:21,0:6:12.93:0,13,187	0/0:26,0:6:17.73:0,18,238	0/0:19,0:18:27.09:0,27,396	0/0:34,0:33:87.28:0,87,1338	0/0:28,0:27:72.22:0,72,1109	0/0:33,0:33:84.06:0,84,1099	0/1:15,5:19:72.81:73,0,241	0/0:17,0:16:36.94:0,37,466	0/0:19,0:19:12.04:0,12,162	0/1:16,8:23:99:110,0,122	0/1:8,3:11:27.03:27,0,65	0/0:11,5:16:9.03:0,9,125	0/0:17,0:17:30.10:0,30,461	0/0:22,0:21:55.55:0,56,634	0/0:25,0:25:45.93:0,46,933	0/0:7,0:7:18.02:0,18,234	0/0:13,0:13:35.80:0,36,433	0/0:20,0:20:25.63:0,26,275	0/0:27,0:26:28.38:0,28,344	0/0:18,0:18:48.16:0,48,752	0/0:19,0:18:48.16:0,48,749	0/0:29,0:28:78.27:0,78,1233	0/0:20,0:20:57.15:0,57,735	0/0:15,0:15:40.94:0,41,490	0/0:10,0:10:20.70:0,21,179	0/0:4,0:4:7.55:0,8,61
chr10	79241355	.	CATAT	C	6125.32	PASS	AB=0.941;AC=33;AF=0.589;AN=56;BaseQRankSum=1.941;DP=560;FS=6.381;HRun=0;HaplotypeScore=138.5356;InbreedingCoeff=0.4112;MQ=54.64;MQ0=8;MQRankSum=-0.109;QD=15.91;ReadPosRankSum=-3.061;VQSLOD=3.7140;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:31:34.90:35,0,144	1/1:11,0:11:0.18:249,0,0	0/0:9,0:7:9.66:0,10,249	0/0:11,0:7:21.02:0,21,299	1/1:20,0:19:6.39:314,6,0	0/0:31,0:30:75.26:0,75,1630	0/0:27,0:26:60.19:0,60,1234	1/1:10,29:39:90.07:1334,90,0	1/1:16,0:15:12.96:146,13,0	0/1:22,0:21:14.74:439,0,15	1/1:20,0:20:12.50:152,13,0	1/1:20,0:19:3.50:93,4,0	1/1:12,0:13:14.43:142,14,0	1/1:18,0:18:1.07:4,1,0	1/1:1,18:19:9.03:162,9,0	1/1:21,0:21:29.76:463,30,0	0/0:25,0:25:63.16:0,63,1088	1/1:8,0:8:21.06:274,21,0	1/1:2,13:15:35.97:506,36,0	0/1:18,0:18:25.88:194,0,26	1/1:34,0:33:41.22:697,41,0	0/0:16,0:16:42.14:0,42,910	0/0:27,0:27:72.25:0,72,1339	0/0:29,0:28:66.20:0,66,1378	0/1:13,0:17:64.99:105,0,65	0/1:17,0:17:16.03:364,0,16	0/1:15,0:16:12.57:414,0,13	0/1:4,0:4:0.19:38,0,0
chr10	79241373	.	C	CT	776.30	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.171;DP=575;FS=18.557;HRun=8;HaplotypeScore=131.2236;InbreedingCoeff=0.9444;MQ=68.44;MQ0=3;MQRankSum=-4.959;QD=9.58;ReadPosRankSum=-4.935;VQSLOD=-0.3870;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:32:74.52:0,75,670	0/0:8,0:8:18:0,18,164	0/0:16,0:14:19.58:0,20,223	0/0:22,0:18:9.10:0,9,216	0/0:18,0:18:32.61:0,33,296	0/0:26,0:26:72.04:0,72,659	0/0:22,0:22:56.99:0,57,511	0/0:39,0:39:96.04:0,96,877	1/1:3,16:18:22.95:246,23,0	0/0:16,0:16:36.01:0,36,329	0/0:15,0:15:10.94:0,11,108	1/1:10,18:27:30.32:264,30,0	1/1:1,11:12:15.04:173,15,0	1/1:3,19:22:25.70:251,26,0	0/0:17,0:17:9:0,9,82	0/0:18,0:18:53.05:0,53,467	0/0:27,0:27:72:0,72,648	0/0:11,0:11:33.02:0,33,302	0/0:20,0:20:60:0,60,541	0/0:21,0:21:39:0,39,357	0/0:33,0:33:60.51:0,61,564	0/0:16,0:16:45.02:0,45,412	0/0:28,0:28:72.03:0,72,658	0/0:24,0:23:57.02:0,57,522	0/0:18,0:18:48.02:0,48,435	0/0:16,0:16:48.02:0,48,436	0/0:19,0:19:39.01:0,39,357	0/0:7,0:7:14.99:0,15,135
chr10	79241879	.	CATAT	C	442.15	PASS	AC=4;AF=0.111;AN=36;BaseQRankSum=0.267;DP=157;FS=12.764;HRun=0;HaplotypeScore=28.6038;InbreedingCoeff=0.4540;MQ=84.31;MQ0=1;MQRankSum=0.525;QD=21.05;ReadPosRankSum=2.520;VQSLOD=1.2992;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,8:13:18.06:305,18,0	./.	0/0:6,0:4:2.37:0,2,8	0/0:22,0:11:6.73:0,7,38	./.	0/0:8,0:9:21.07:0,21,497	0/0:3,0:3:6.02:0,6,126	0/0:18,0:16:28.82:0,29,386	./.	./.	./.	0/0:3,0:7:8.19:0,8,36	0/0:5,0:8:8.39:0,8,38	0/0:1,0:4:5.60:0,6,25	0/0:2,0:2:2.90:0,3,16	0/0:3,0:3:3.01:0,3,69	0/0:17,0:17:39.11:0,39,920	0/0:8,0:8:6.02:0,6,95	./.	./.	./.	./.	0/0:3,0:3:3.01:0,3,75	0/0:2,0:2:3.01:0,3,75	1/1:2,6:8:15.05:241,15,0	0/0:2,0:2:0.47:0,0,1	./.	0/0:3,0:3:3.01:0,3,57
chr10	79242685	.	G	GA	672.72	PASS	AB=0.826;AC=7;AF=0.125;AN=56;BaseQRankSum=-3.296;DP=671;FS=1.260;HRun=11;HaplotypeScore=69.9773;InbreedingCoeff=0.1541;MQ=78.43;MQ0=0;MQRankSum=-0.177;QD=6.29;ReadPosRankSum=-0.276;VQSLOD=1.8101;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,22:30:38.20:545,0,38	0/0:10,0:11:19.92:0,20,143	0/0:19,0:18:17.88:0,18,139	0/1:14,1:16:8.25:8,0,157	0/0:31,0:32:64.53:0,65,490	0/0:20,0:21:55.82:0,56,424	0/0:29,0:29:74.68:0,75,578	0/0:41,0:42:97.64:0,98,749	0/0:25,0:26:52.75:0,53,401	0/0:34,0:34:83.65:0,84,649	0/0:22,1:24:28.29:0,28,386	0/0:19,0:22:48.88:0,49,360	0/0:23,0:23:56.75:0,57,441	0/0:18,0:18:38.82:0,39,302	0/0:20,1:21:20.35:0,20,341	0/0:23,0:23:53.78:0,54,418	0/0:26,3:29:1.84:0,2,380	0/1:18,2:20:16.04:16,0,257	0/1:15,3:18:16.09:16,0,257	0/0:28,0:28:65.67:0,66,508	0/0:24,1:26:19.38:0,19,324	0/0:24,0:24:62.73:0,63,487	0/0:21,0:23:48.86:0,49,360	0/0:28,0:30:63.73:0,64,469	1/1:5,5:13:7.36:205,7,0	0/0:29,0:29:65.70:0,66,511	0/0:30,0:30:65.70:0,66,508	0/1:9,1:10:0.55:1,0,179
chr10	79244258	.	GCTTT	G	7589.94	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=0.232;DP=490;FS=26.620;HRun=0;HaplotypeScore=84.2498;InbreedingCoeff=0.6592;MQ=57.67;MQ0=9;MQRankSum=1.255;QD=24.89;ReadPosRankSum=3.081;VQSLOD=2.4784;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:25:22.79:104,0,23	1/1:6,0:6:15.05:243,15,0	0/0:15,0:7:15.01:0,15,158	0/0:17,0:10:14.44:0,14,143	1/1:15,0:14:36.12:576,36,0	0/0:9,0:9:21.06:0,21,323	0/0:20,0:19:39.08:0,39,536	1/1:26,0:25:63.17:897,63,0	0/1:5,0:5:18.52:38,0,19	1/1:3,16:19:48.14:718,48,0	1/1:12,2:14:38.36:559,38,0	0/0:12,0:12:13.85:0,14,126	0/1:19,0:19:7.03:7,0,41	0/0:22,0:21:1.90:0,2,24	1/1:13,0:12:36.10:524,36,0	1/1:4,13:17:3.01:48,3,0	0/0:24,0:22:52.66:0,53,731	1/1:17,0:16:27.07:359,27,0	1/1:7,11:16:32.99:359,33,0	1/1:1,15:16:44.83:470,45,0	1/1:23,0:19:45.12:627,45,0	0/0:21,0:20:48.12:0,48,728	0/0:16,0:16:39.13:0,39,672	0/0:29,0:28:49.94:0,50,577	0/1:15,0:14:19.11:19,0,45	1/1:14,0:14:36.12:582,36,0	1/1:17,0:17:35.27:566,35,0	1/1:24,1:23:57.19:893,57,0
chr10	79244282	.	CCTTCCTTTCTTT	C	3132.48	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=0.252;DP=519;FS=7.988;HRun=0;HaplotypeScore=169.7750;InbreedingCoeff=-0.3205;MQ=53.82;MQ0=25;MQRankSum=2.824;QD=8.47;ReadPosRankSum=3.537;VQSLOD=1.6860;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:19:35.47:0,35,448	0/1:6,0:6:17.88:91,0,18	0/0:7,0:2:2.92:0,3,17	0/0:8,0:6:3.52:0,4,26	0/1:18,0:16:99:199,0,231	0/0:9,0:9:27:0,27,367	0/0:15,0:11:26.90:0,27,218	0/1:32,0:21:12.38:278,0,12	0/1:6,0:6:22.96:80,0,23	0/1:26,0:23:99:233,0,183	0/1:20,0:20:99:159,0,777	0/1:11,0:11:15.06:110,0,15	1/1:1,17:17:3.01:108,3,0	0/1:24,0:23:65.02:419,0,65	0/1:20,0:18:99:158,0,145	0/1:17,0:16:3.66:16,0,4	0/0:27,0:25:66.03:0,66,1109	0/1:20,0:19:99:118,0,222	0/1:18,0:15:63.26:63,0,130	0/1:19,0:18:99:127,0,108	1/1:20,0:13:35.65:250,36,0	0/0:20,0:19:54.10:0,54,894	0/0:19,0:19:42.03:0,42,439	0/1:31,0:30:27.71:28,0,692	0/0:19,0:13:32.96:0,33,572	0/1:20,0:18:99:186,0,905	0/1:16,0:16:76.74:199,0,77	0/1:28,0:24:84.55:475,0,85
chr10	79244286	.	CCTTT	C	2143.60	PASS	AB=0.995;AC=26;AF=0.565;AN=46;BaseQRankSum=-3.158;DP=527;FS=18.381;HRun=0;HaplotypeScore=111.3940;InbreedingCoeff=0.3339;MQ=53.06;MQ0=25;MQRankSum=1.396;QD=6.64;ReadPosRankSum=0.283;VQSLOD=1.2441;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:18:12.88:14,0,13	1/1:8,0:8:8.97:90,9,0	./.	./.	0/0:19,0:16:11.98:0,12,99	1/1:9,0:9:9.01:98,9,0	0/0:15,0:11:2.96:0,3,19	./.	0/0:8,0:8:11.82:0,12,76	1/1:25,0:22:18.05:230,18,0	0/0:20,0:20:16.54:0,17,232	1/1:11,0:11:16.29:200,16,0	1/1:19,0:18:3:28,3,0	0/1:25,0:24:19.11:136,0,19	1/1:20,0:18:18.03:211,18,0	./.	0/1:26,0:24:98.97:192,0,99	0/0:22,0:20:17.97:0,18,226	1/1:17,0:14:9.03:133,9,0	1/1:17,0:16:15.04:187,15,0	./.	1/1:20,0:19:18.03:225,18,0	0/0:14,7:21:3.01:0,3,36	0/1:34,0:33:19.23:187,0,19	0/1:22,0:16:42.19:43,0,42	0/0:19,0:17:19.62:0,20,326	1/1:16,0:16:14.99:170,15,0	0/1:30,0:27:22.23:167,0,22
chr10	79244589	.	A	AG	937.82	PASS	AC=18;AF=1.000;AN=18;DP=102;FS=0.000;HRun=1;HaplotypeScore=14.0415;MQ=18.54;MQ0=41;QD=22.87;VQSLOD=3.3851;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,4:4:12.04:160,12,0	./.	./.	1/1:1,1:1:3.01:34,3,0	./.	./.	./.	./.	1/1:4,2:3:8.99:110,9,0	1/1:0,2:2:6.02:69,6,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:1,5:6:18.05:203,18,0	./.	1/1:2,5:5:15.04:172,15,0	1/1:3,3:5:9.02:100,9,0	./.	1/1:0,4:3:9.03:115,9,0	1/1:3,1:1:3.01:45,3,0	./.	./.
chr10	79246750	.	AT	A	2268.55	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.587;DP=603;FS=0.502;HRun=1;HaplotypeScore=61.9185;InbreedingCoeff=0.9927;MQ=89.92;MQ0=0;MQRankSum=-4.831;QD=36.01;ReadPosRankSum=3.349;VQSLOD=3.8205;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:41:99:1509,108,0	0/0:7,0:7:21.07:0,21,336	0/0:19,0:19:40.55:0,41,688	0/0:31,0:30:87.22:0,87,1279	0/0:28,0:28:84.26:0,84,1286	0/0:25,0:25:75.26:0,75,1196	0/0:20,0:20:60.16:0,60,888	0/0:41,0:41:99:0,123,1901	0/0:20,0:20:57.19:0,57,906	0/0:22,0:22:66.23:0,66,1053	0/0:17,0:17:51.16:0,51,792	0/0:9,0:9:27.09:0,27,429	0/0:27,0:27:81.26:0,81,1268	0/0:20,0:20:60.20:0,60,958	0/0:23,0:23:69.24:0,69,1103	0/0:18,0:18:54.18:0,54,848	0/0:22,0:22:66.08:0,66,932	0/0:6,0:6:18.06:0,18,284	0/0:17,0:17:51.14:0,51,768	0/0:29,0:29:87.28:0,87,1367	0/0:23,0:23:69.20:0,69,1039	0/0:13,0:13:39.13:0,39,622	0/0:19,0:19:54.11:0,54,807	0/0:16,0:16:48.14:0,48,742	1/1:0,22:22:63.21:881,63,0	0/0:24,0:24:72.25:0,72,1150	0/0:35,0:35:99:0,105,1599	0/0:9,0:9:27.07:0,27,400
chr10	79246852	.	GA	G	12646.96	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=13.394;DP=588;FS=3.815;HRun=3;HaplotypeScore=64.2310;InbreedingCoeff=0.9953;MQ=80.74;MQ0=0;MQRankSum=-3.530;QD=34.65;ReadPosRankSum=1.756;VQSLOD=5.5918;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,28:35:96.27:1173,96,0	1/1:0,6:6:18.06:223,18,0	0/0:16,0:16:27.52:0,28,548	0/0:17,0:17:42.09:0,42,537	1/1:1,40:41:99:1487,120,0	0/0:16,0:16:39.13:0,39,561	0/0:12,0:12:33.11:0,33,475	1/1:1,27:28:81.24:992,81,0	0/0:22,0:22:63.21:0,63,907	1/1:0,35:35:99:1301,105,0	1/1:0,25:25:72.23:893,72,0	0/0:11,0:11:33.11:0,33,475	0/0:29,0:29:87.29:0,87,1252	0/0:21,0:21:63.21:0,63,905	1/1:1,21:22:54.17:670,54,0	1/1:0,15:15:42.13:521,42,0	0/0:18,0:18:54.18:0,54,778	1/1:0,8:8:15.05:186,15,0	1/1:0,24:24:72.17:852,72,0	1/1:1,20:20:57.18:707,57,0	1/1:0,28:28:75.24:930,75,0	0/0:22,0:22:66.21:0,66,930	0/0:24,0:24:72.23:0,72,1017	0/0:15,0:15:45.15:0,45,645	1/1:2,14:16:48.15:594,48,0	1/1:0,25:25:72.23:893,72,0	1/1:0,30:30:81.25:1004,81,0	1/1:0,6:6:18.06:223,18,0
chr10	79246910	.	AT	A	1261.09	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.981;DP=539;FS=0.000;HRun=6;HaplotypeScore=74.1147;InbreedingCoeff=0.9322;MQ=64.91;MQ0=0;MQRankSum=-2.468;QD=25.74;ReadPosRankSum=-0.749;VQSLOD=3.2358;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:69.17:741,69,0	0/0:9,0:9:27.09:0,27,355	0/0:9,0:7:8.06:0,8,84	0/0:8,0:6:9.03:0,9,118	0/0:41,0:41:99:0,114,1484	0/0:16,0:16:48.15:0,48,625	0/0:16,0:16:48.15:0,48,618	0/0:33,0:33:87.27:0,87,1129	0/0:14,0:14:42.14:0,42,553	0/0:37,0:37:99:0,108,1419	0/0:17,0:17:45.14:0,45,578	0/0:14,0:14:36.12:0,36,474	0/0:22,0:22:63.18:0,63,799	0/0:15,0:15:42.05:0,42,530	0/0:20,0:20:51.15:0,51,656	0/0:19,0:19:54.15:0,54,680	0/0:13,0:13:33.11:0,33,434	0/0:8,0:7:20.79:0,21,233	0/0:27,0:26:57.19:0,57,748	0/0:23,0:23:66.21:0,66,867	0/0:27,0:27:69.22:0,69,905	0/0:15,0:15:39.13:0,39,513	0/0:26,0:26:78.25:0,78,1026	0/0:9,0:9:27.09:0,27,354	1/1:2,21:23:60.15:641,60,0	0/0:16,0:16:45.12:0,45,553	0/0:27,0:27:69.22:0,69,906	0/0:8,0:8:21.07:0,21,276
chr10	79247352	.	A	AT	17504.77	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=4.712;DP=703;FS=17.155;HRun=0;HaplotypeScore=88.0594;InbreedingCoeff=0.9908;MQ=79.73;MQ0=0;MQRankSum=-5.068;QD=44.43;ReadPosRankSum=1.394;VQSLOD=2.9895;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,47:48:99:2110,132,0	1/1:0,6:6:18.06:288,18,0	0/0:36,0:36:93.44:0,93,1246	0/0:26,0:25:42.80:0,43,877	1/1:0,24:24:60.20:959,60,0	0/0:18,0:18:54.18:0,54,754	0/0:21,0:21:63.17:0,63,844	1/1:0,34:34:99:1537,102,0	0/0:27,0:27:81.25:0,81,1115	1/1:1,24:25:72.22:1127,72,0	1/1:0,18:18:54.18:863,54,0	0/0:20,0:20:60.19:0,60,819	0/0:19,0:19:51.17:0,51,713	0/0:25,0:25:75.25:0,75,1048	1/1:1,25:26:72.25:1151,72,0	1/1:1,18:19:9.21:726,9,0	0/0:44,0:44:99:0,117,1789	1/1:0,23:23:66.23:1052,66,0	1/1:1,22:23:66.22:1053,66,0	1/1:1,27:28:78.27:1247,78,0	1/1:0,37:37:99:1727,108,0	0/0:21,0:21:63.21:0,63,881	0/0:22,0:22:66.19:0,66,889	0/0:30,0:30:84.26:0,84,1155	1/1:1,16:17:45.15:720,45,0	1/1:0,29:29:84.29:1343,84,0	1/1:1,27:28:78.22:1219,78,0	1/1:0,9:9:24.08:384,24,0
chr10	79247778	.	A	AT	1955.62	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.518;DP=657;FS=3.340;HRun=3;HaplotypeScore=68.5606;InbreedingCoeff=0.9966;MQ=57.09;MQ0=1;MQRankSum=1.652;QD=27.94;ReadPosRankSum=1.464;VQSLOD=2.9063;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,37:42:84.24:1153,84,0	0/0:13,0:13:36.11:0,36,432	0/0:26,0:18:43.62:0,44,461	0/0:9,0:8:24.07:0,24,277	0/0:31,0:31:87.25:0,87,1032	0/0:31,1:32:84.26:0,84,1008	0/0:14,0:14:42.12:0,42,493	0/0:39,0:39:99:0,108,1276	0/0:26,1:27:69.21:0,69,828	0/0:25,0:26:72.01:0,72,841	0/0:26,0:26:63.19:0,63,756	0/0:19,2:21:51.14:0,51,600	0/0:24,0:24:69.21:0,69,827	0/0:20,0:20:60.18:0,60,720	0/0:19,0:18:57.17:0,57,684	0/0:16,0:16:48.13:0,48,564	0/0:32,3:34:52.98:0,53,1041	0/0:13,0:13:39.12:0,39,468	0/0:12,0:11:33.09:0,33,387	0/0:19,0:19:54.15:0,54,635	0/0:24,0:24:66.19:0,66,780	0/0:34,0:34:93.27:0,93,1104	0/0:16,0:16:48.15:0,48,576	0/0:15,0:15:39.12:0,39,468	1/1:1,27:28:66.22:924,66,0	0/0:27,1:28:78.24:0,78,936	0/0:39,0:39:99:0,102,1223	0/0:8,0:8:21.06:0,21,252
chr10	79249267	.	GACCCC	G	7276.09	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.290;DP=670;FS=7.410;HRun=0;HaplotypeScore=124.0226;InbreedingCoeff=0.9874;MQ=91.12;MQ0=2;MQRankSum=-6.024;QD=45.19;ReadPosRankSum=5.924;VQSLOD=4.6262;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,37:42:82.16:1681,82,0	0/0:5,0:5:15.05:0,15,461	0/0:26,0:26:69.22:0,69,1928	0/0:33,0:33:83.95:0,84,2168	0/0:25,0:25:69.22:0,69,2048	0/0:19,0:19:54.19:0,54,1660	0/0:22,0:22:60.21:0,60,1783	0/0:46,0:46:99:0,117,3382	1/1:2,24:26:60.21:1244,60,0	0/0:30,0:30:90.31:0,90,2740	0/0:24,0:24:69.22:0,69,2006	1/1:1,22:22:57.20:1181,57,0	1/1:2,17:19:45.15:932,45,0	1/1:1,23:24:51.18:1057,51,0	0/0:27,0:27:81.28:0,81,2490	0/0:22,0:22:60.21:0,60,1793	0/0:22,0:22:66.20:0,66,1959	0/0:5,0:5:15.05:0,15,407	0/0:32,0:32:87.30:0,87,2639	0/0:17,0:17:45.15:0,45,1326	0/0:40,0:40:99:0,120,3640	0/0:20,0:20:60.19:0,60,1751	0/0:20,0:20:54.19:0,54,1658	0/0:17,0:17:42.14:0,42,1291	1/1:3,23:26:57.20:1181,57,0	0/0:33,0:33:96.33:0,96,2844	0/0:19,0:19:54.18:0,54,1598	0/0:5,0:5:12.01:0,12,297
chr10	79249761	.	GGAGA	G	173.01	PASS	AB=0.980;AC=7;AF=0.194;AN=36;BaseQRankSum=0.343;DP=457;FS=48.451;HRun=0;HaplotypeScore=85.0800;InbreedingCoeff=0.2099;MQ=58.41;MQ0=14;MQRankSum=-0.254;QD=1.99;ReadPosRankSum=-2.821;VQSLOD=-0.7654;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:24:22.87:23,0,27	0/0:6,0:5:0:0,0,0	./.	./.	0/0:16,0:16:6:0,6,72	0/0:19,0:20:6.01:0,6,71	0/0:23,0:24:2.69:0,3,8	0/0:18,0:16:0:0,0,0	1/1:18,1:18:8.90:83,9,0	0/0:23,0:22:7.84:0,8,98	0/0:12,0:14:3.01:0,3,51	0/1:15,0:16:3.72:96,0,4	1/1:13,4:17:2.59:45,3,0	./.	./.	0/0:14,0:14:12.02:0,12,165	0/1:9,0:9:32.92:33,0,72	./.	0/0:15,0:14:12.04:0,12,166	./.	0/0:19,0:18:20.89:0,21,230	./.	./.	0/0:16,0:14:3.01:0,3,37	./.	./.	0/0:15,0:15:3.01:0,3,43	0/0:8,0:8:3.48:0,3,41
chr10	79250742	.	G	GA	10136.64	PASS	AB=0.529;AC=39;AF=0.696;AN=56;BaseQRankSum=-9.547;DP=605;FS=6.959;HRun=9;HaplotypeScore=59.6311;InbreedingCoeff=0.8211;MQ=62.71;MQ0=1;MQRankSum=1.135;QD=23.63;ReadPosRankSum=2.535;VQSLOD=5.8018;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,12:17:33.09:360,33,0	0/1:1,8:9:1.98:208,0,2	0/0:34,0:20:35.55:0,36,269	0/0:25,0:11:0.42:0,0,60	1/1:6,36:43:99:1143,105,0	0/0:18,0:18:38.95:0,39,335	0/0:15,0:16:35.02:0,35,292	1/1:5,24:29:66.14:704,66,0	1/1:1,15:18:31.20:419,31,0	1/1:6,23:30:42.17:720,42,0	1/1:7,16:23:2.01:464,2,0	1/1:0,17:17:48.13:531,48,0	1/1:5,11:16:7.03:306,7,0	1/1:7,8:15:1.02:237,1,0	1/1:4,22:26:54.09:583,54,0	1/1:1,12:13:27.07:299,27,0	0/0:24,0:24:56.98:0,57,495	1/1:4,11:15:33.09:365,33,0	1/1:1,10:11:30.08:332,30,0	1/1:7,25:32:72.19:796,72,0	1/1:1,6:7:18.05:199,18,0	0/0:23,0:23:65.97:0,66,569	0/0:24,0:24:68.99:0,69,599	0/0:11,0:11:23.99:0,24,208	1/1:5,17:22:16.06:405,16,0	1/1:3,21:24:63.17:697,63,0	1/1:8,35:43:61.18:903,61,0	1/1:5,14:19:42.11:465,42,0
chr10	79251090	.	GA	G	9415.65	PASS	AC=40;AF=0.741;AN=54;BaseQRankSum=11.119;DP=575;FS=0.000;HRun=9;HaplotypeScore=57.7125;InbreedingCoeff=0.9637;MQ=55.82;MQ0=5;MQRankSum=4.610;QD=22.05;ReadPosRankSum=1.346;VQSLOD=5.5213;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:42:384,42,0	1/1:0,4:4:12.01:109,12,0	0/0:14,1:5:9.02:0,9,100	./.	1/1:2,39:41:99:1031,114,0	0/0:20,0:20:48.13:0,48,546	0/0:14,0:13:36.11:0,36,414	1/1:5,14:11:15:137,15,0	1/1:1,22:23:66.04:604,66,0	1/1:2,31:33:93.04:851,93,0	1/1:3,23:26:57.02:521,57,0	1/1:1,15:16:39.02:357,39,0	1/1:3,23:26:66.03:604,66,0	1/1:1,10:11:24.01:219,24,0	1/1:0,18:18:51.03:467,51,0	1/1:1,18:19:48.03:439,48,0	0/0:26,0:26:76.73:0,77,843	1/1:3,11:14:29.37:241,29,0	1/1:2,10:10:30.02:274,30,0	1/1:2,21:23:54.01:493,54,0	1/1:1,10:11:27.01:247,27,0	0/0:28,0:28:69.18:0,69,779	0/0:25,0:25:66.20:0,66,760	0/0:8,0:8:7.10:0,7,163	1/1:3,19:22:45.02:412,45,0	1/1:2,27:29:81.02:736,81,0	1/1:2,30:32:81.04:741,81,0	1/1:4,23:27:60.03:549,60,0
chr10	79251902	.	TAA	T	5036.12	PASS	AB=0.572;AC=36;AF=0.643;AN=56;BaseQRankSum=4.227;DP=465;FS=3.302;HRun=14;HaplotypeScore=69.0034;InbreedingCoeff=0.6340;MQ=67.64;MQ0=4;MQRankSum=1.198;QD=14.90;ReadPosRankSum=5.677;VQSLOD=3.9849;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:21:26.04:124,26,0	0/1:2,5:7:5.85:121,0,6	0/0:20,0:12:2.26:0,2,80	0/0:10,0:8:8.69:0,9,100	1/1:3,21:25:60.70:589,61,0	0/0:13,0:14:35.55:0,36,431	0/0:6,0:7:18.51:0,19,222	0/1:6,15:19:15.15:239,0,15	1/1:2,0:18:20.33:117,20,0	1/1:6,13:19:26.76:249,27,0	1/1:3,20:24:53.95:499,54,0	1/1:3,0:11:16.93:72,17,0	1/1:3,1:19:30.42:146,30,0	1/1:1,1:17:41.42:193,41,0	1/1:6,12:17:19.84:216,20,0	1/1:3,9:12:23.98:222,24,0	0/0:22,0:23:51.04:0,51,754	1/1:2,4:6:12:111,12,0	0/1:5,10:16:42.78:220,0,43	1/1:2,22:23:59.92:544,60,0	0/1:2,13:15:12.04:220,0,12	0/0:22,0:23:59.54:0,60,700	0/0:18,0:20:47.09:0,47,520	0/0:6,0:9:21.05:0,21,251	1/1:1,0:13:21.92:95,22,0	1/1:4,22:27:59.90:602,60,0	1/1:4,15:20:47.77:428,48,0	1/1:1,2:3:3:28,3,0
chr10	79252432	.	G	GTT	1271.91	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-5.948;DP=722;FS=5.327;HRun=9;HaplotypeScore=83.8836;InbreedingCoeff=0.7836;MQ=68.37;MQ0=10;MQRankSum=0.311;QD=21.20;ReadPosRankSum=0.031;VQSLOD=2.7024;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:19:41.62:592,42,0	0/1:13,0:13:16.11:16,0,257	0/0:69,0:32:69.05:0,69,625	0/0:57,0:23:34.92:0,35,342	0/0:40,0:40:96.17:0,96,1022	0/0:23,0:23:63.15:0,63,671	0/0:21,0:21:51.08:0,51,526	0/0:39,0:37:92.92:0,93,949	0/0:24,0:24:69.15:0,69,726	0/0:30,0:30:69.14:0,69,729	0/0:24,0:24:66.16:0,66,702	0/0:17,0:17:42.03:0,42,428	0/0:13,0:13:39.08:0,39,407	0/0:13,0:13:33.08:0,33,351	0/0:22,0:22:45.04:0,45,470	0/0:21,0:21:57.13:0,57,599	0/0:18,0:18:48.09:0,48,503	0/0:12,0:12:24.02:0,24,247	0/0:32,0:28:66.14:0,66,695	0/0:29,0:29:78.18:0,78,829	0/0:14,0:14:33.07:0,33,351	0/0:26,0:26:60.10:0,60,630	0/0:20,0:20:54.13:0,54,574	0/0:19,0:19:54.11:0,54,564	1/1:5,22:27:53.67:793,54,0	0/0:31,0:32:75.10:0,75,849	0/0:28,0:28:78.17:0,78,821	0/0:16,0:16:33.04:0,33,351
chr10	79253328	.	GAGA	G	3810.57	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.447;DP=669;FS=0.440;HRun=0;HaplotypeScore=93.3530;InbreedingCoeff=0.9986;MQ=62.29;MQ0=1;MQRankSum=2.134;QD=40.54;ReadPosRankSum=4.060;VQSLOD=4.9670;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,3131	0/0:8,0:8:21.07:0,21,484	0/0:30,0:25:72.21:0,72,1565	0/0:15,0:15:34.86:0,35,829	0/0:24,0:24:63.22:0,63,1450	0/0:21,0:21:63.20:0,63,1391	0/0:18,0:18:54.19:0,54,1217	0/0:39,0:39:99:0,114,2618	1/1:1,33:34:34.49:1318,34,0	0/0:27,0:27:81.27:0,81,1815	0/0:18,0:17:51.18:0,51,1167	1/1:1,14:16:30.10:512,30,0	1/1:1,18:19:48.16:818,48,0	1/1:0,25:25:69.24:1163,69,0	0/0:34,0:34:99:0,99,2221	0/0:23,0:23:66.23:0,66,1506	0/0:23,0:24:63.17:0,63,1380	0/0:21,0:21:60.21:0,60,1360	0/0:28,0:28:81.26:0,81,1815	0/0:33,0:33:96.33:0,96,2160	0/0:29,0:29:84.29:0,84,1919	0/0:22,0:22:57.20:0,57,1310	0/0:16,0:16:45.15:0,45,1036	0/0:15,0:15:45.15:0,45,1012	0/0:25,0:25:75.26:0,75,1730	0/0:18,0:18:54.19:0,54,1230	0/0:25,0:25:75.26:0,75,1696	0/0:13,0:13:39.09:0,39,850
chr10	79255941	.	TACACACAC	T	3881.77	PASS	AB=0.977;AC=32;AF=0.667;AN=48;BaseQRankSum=6.627;DP=483;FS=0.000;HRun=0;HaplotypeScore=137.7004;InbreedingCoeff=0.6347;MQ=59.87;MQ0=9;MQRankSum=-7.249;QD=13.53;ReadPosRankSum=1.265;VQSLOD=2.7079;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:13.96:50,0,14	1/1:6,0:6:3.01:74,3,0	./.	./.	1/1:10,5:16:11.83:279,12,0	0/0:21,0:24:36.09:0,36,1329	0/0:16,0:17:18.06:0,18,628	./.	1/1:13,0:20:17.80:291,18,0	1/1:20,9:29:24.06:545,24,0	1/1:8,6:14:12.04:298,12,0	1/1:8,0:13:12.04:223,12,0	1/1:5,0:10:12.04:223,12,0	1/1:7,0:14:12.04:223,12,0	1/1:16,5:20:12.04:298,12,0	1/1:13,6:20:18.06:429,18,0	0/0:17,0:18:27.03:0,27,924	0/0:14,0:14:3.01:0,3,39	1/1:6,0:6:3:26,3,0	1/1:18,5:23:12.51:271,13,0	./.	0/0:15,0:19:11.63:0,12,349	0/0:20,0:19:21.07:0,21,741	0/0:17,0:17:24.08:0,24,803	1/1:11,0:17:15.05:279,15,0	1/1:14,2:15:1.01:72,1,0	1/1:23,8:30:11.92:264,12,0	0/1:10,0:9:27.08:35,0,27
chr10	79257391	.	GA	G	3195.47	PASS	AB=0.631;AC=7;AF=0.135;AN=52;BaseQRankSum=8.448;DP=954;FS=4.316;HRun=3;HaplotypeScore=81.1591;InbreedingCoeff=0.1769;MQ=43.93;MQ0=121;MQRankSum=4.460;QD=14.14;ReadPosRankSum=0.941;VQSLOD=2.6951;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:36,41:56:99:1003,0,158	0/0:14,0:12:33.09:0,33,435	./.	./.	0/0:42,0:29:78.25:0,78,1085	0/0:33,0:27:75.25:0,75,1079	0/0:39,0:26:20.89:0,21,296	0/0:54,0:13:35.99:0,36,427	0/1:5,21:24:18.66:541,0,19	0/0:44,0:34:90.28:0,90,1257	0/0:17,0:12:27.08:0,27,362	0/1:16,17:28:99:426,0,169	0/1:21,24:32:99:560,0,217	1/1:4,13:14:27.08:335,27,0	0/0:53,0:32:78.25:0,78,1087	0/0:27,0:15:34.40:0,34,498	0/0:52,0:37:81.26:0,81,1146	0/0:44,0:30:57.14:0,57,799	0/0:30,0:20:57.19:0,57,818	0/0:34,0:23:66.22:0,66,950	0/0:42,0:33:78.21:0,78,1074	0/0:26,0:25:65.95:0,66,947	0/0:28,0:18:42.59:0,43,548	0/0:41,0:28:57.14:0,57,774	0/1:12,16:21:99:466,0,103	0/0:36,0:22:60.20:0,60,858	0/0:28,0:21:60.20:0,60,864	0/0:20,0:18:51.17:0,51,729
chr10	79258218	.	C	CA	5683.46	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.198;DP=720;FS=1.106;HRun=4;HaplotypeScore=75.4032;InbreedingCoeff=0.9988;MQ=81.03;MQ0=0;MQRankSum=0.865;QD=36.20;ReadPosRankSum=3.013;VQSLOD=5.0524;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:25:66.18:881,66,0	0/0:9,0:9:24.07:0,24,271	0/0:28,0:28:74.35:0,74,751	0/0:12,0:12:21.09:0,21,319	0/0:25,0:25:72.19:0,72,806	0/0:29,0:29:87.25:0,87,987	0/0:26,0:26:69.19:0,69,782	0/0:32,0:32:75.20:0,75,842	1/1:1,33:34:96.32:1313,96,0	0/0:43,0:43:99:0,126,1415	0/0:18,0:18:45.13:0,45,508	1/1:0,20:20:51.17:698,51,0	1/1:1,27:28:78.26:1067,78,0	1/1:2,27:29:72.24:985,72,0	0/0:38,0:38:99:0,111,1220	0/0:29,0:29:78.22:0,78,884	0/0:23,0:23:60.17:0,60,681	0/0:22,0:22:57.16:0,57,647	0/0:31,0:31:90.23:0,90,1003	0/0:31,0:31:90.26:0,90,1020	0/0:22,0:21:60.17:0,60,681	0/0:24,0:24:72.21:0,72,816	0/0:23,0:23:57.16:0,57,643	0/0:17,0:17:48.10:0,48,522	1/1:1,19:20:54.18:739,54,0	0/0:28,0:28:81.23:0,81,919	0/0:36,0:36:99:0,99,1102	0/0:17,0:17:51.15:0,51,577
chr10	79258595	.	G	GT	9625.88	PASS	AB=0.670;AC=37;AF=0.661;AN=56;BaseQRankSum=0.426;DP=496;FS=12.351;HRun=9;HaplotypeScore=88.6063;InbreedingCoeff=0.6089;MQ=67.96;MQ0=1;MQRankSum=-3.456;QD=24.25;ReadPosRankSum=-0.285;VQSLOD=4.3009;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:2,8:10:5.04:165,0,5	1/1:3,3:6:15.04:165,15,0	0/0:16,0:11:18.12:0,18,138	0/0:14,0:11:9.30:0,9,111	0/1:6,17:24:12.03:537,0,12	0/1:19,2:21:15.37:15,0,340	0/0:8,0:8:20.99:0,21,182	1/1:13,33:46:85.25:1125,85,0	1/1:4,9:13:36.06:377,36,0	1/1:6,20:26:60.15:654,60,0	1/1:8,23:31:35.08:803,35,0	1/1:4,6:10:21.02:219,21,0	0/1:4,6:10:5:178,0,5	1/1:1,14:15:39.11:431,39,0	1/1:2,13:15:39.11:431,39,0	1/1:2,14:16:45.11:487,45,0	0/0:34,0:35:89:0,89,761	1/1:4,11:15:33.09:364,33,0	1/1:5,17:22:51.10:551,51,0	1/1:4,20:25:42.96:669,43,0	0/1:7,6:13:10.86:118,0,11	0/0:5,0:5:11.99:0,12,104	0/0:18,0:18:47.95:0,48,409	0/0:2,0:2:6:0,6,52	1/1:6,17:23:53.88:571,54,0	1/1:2,16:18:54.11:582,54,0	1/1:1,23:24:66.18:730,66,0	1/1:1,13:14:42.09:454,42,0
chr10	79258616	.	TTTTTA	T	10815.65	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=9.413;DP=478;FS=14.123;HRun=0;HaplotypeScore=128.1984;InbreedingCoeff=0.9074;MQ=64.32;MQ0=4;MQRankSum=-8.466;QD=30.64;ReadPosRankSum=2.140;VQSLOD=4.0758;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,3:7:9.03:169,9,0	1/1:0,6:6:18.02:302,18,0	0/0:17,0:11:9.74:0,10,259	0/0:21,0:16:27.19:0,27,476	1/1:6,23:29:53.88:709,54,0	0/0:21,0:21:45.15:0,45,1271	0/0:10,0:10:21.06:0,21,511	1/1:23,10:33:42.13:753,42,0	1/1:6,8:14:15.05:282,15,0	1/1:15,10:25:35.24:670,35,0	1/1:10,20:30:60.10:995,60,0	1/1:3,8:11:18.06:338,18,0	1/1:4,7:11:21.05:366,21,0	1/1:7,7:14:21.07:395,21,0	1/1:6,7:13:21.07:395,21,0	1/1:3,12:15:36.11:648,36,0	0/0:31,0:31:57.07:0,57,1487	1/1:6,8:14:30.05:488,30,0	1/1:12,7:19:30.08:497,30,0	1/1:11,16:27:51.07:872,51,0	1/1:6,3:9:11.99:191,12,0	0/0:4,0:4:3.01:0,3,86	0/0:19,0:19:45.15:0,45,1227	0/0:2,0:2:3.01:0,3,86	1/1:6,17:23:42.14:771,42,0	1/1:7,15:22:48.16:884,48,0	1/1:6,14:20:42.14:774,42,0	1/1:8,3:11:21.05:316,21,0
chr10	79258634	.	TTA	T	2075.23	PASS	AB=0.979;AC=21;AF=0.375;AN=56;BaseQRankSum=15.820;DP=450;FS=35.710;HRun=0;HaplotypeScore=114.3411;InbreedingCoeff=-0.4169;MQ=67.37;MQ0=3;MQRankSum=-10.626;QD=6.14;ReadPosRankSum=8.415;VQSLOD=1.2757;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:11:32.15:32,0,163	0/1:10,0:10:40.52:41,0,147	0/0:14,0:10:23.28:0,23,302	0/0:23,0:20:34.50:0,35,475	0/1:26,1:27:99:120,0,337	0/0:18,0:18:54.15:0,54,858	0/0:9,0:9:27.08:0,27,447	0/1:32,1:33:99:151,0,281	0/1:12,0:12:46.57:47,0,92	0/1:20,1:21:99:114,0,186	0/1:24,1:25:48.36:211,0,48	0/1:11,0:11:39.18:60,0,39	0/1:11,0:11:81.47:81,0,86	0/1:10,0:10:1.84:75,0,2	0/1:14,0:14:70.49:70,0,141	0/1:17,0:17:99:134,0,107	0/0:23,0:23:66.06:0,66,1025	0/1:13,3:16:99:125,0,113	0/1:16,1:17:99:135,0,129	0/1:25,1:26:99:174,0,222	0/1:9,0:9:52.78:53,0,56	0/0:4,0:4:12.02:0,12,168	0/0:18,0:18:48.13:0,48,775	0/0:3,0:3:9.03:0,9,143	0/1:19,0:19:30.78:158,0,31	0/1:20,0:20:87.93:156,0,88	0/1:21,0:20:99:160,0,118	1/1:5,2:7:20.51:143,21,0
chr10	79260514	.	T	TA	12383.32	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=15.093;DP=466;FS=9.547;HRun=1;HaplotypeScore=65.2569;InbreedingCoeff=0.9943;MQ=74.56;MQ0=0;MQRankSum=-2.533;QD=40.21;ReadPosRankSum=-0.971;VQSLOD=4.5669;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:17:45.15:651,45,0	1/1:0,9:9:27.05:370,27,0	0/0:10,0:10:30.08:0,30,375	0/0:11,0:11:33.08:0,33,401	1/1:1,29:30:84.11:1126,84,0	0/0:27,0:27:81.26:0,81,1052	0/0:10,0:10:30.10:0,30,390	1/1:1,27:27:81.26:1161,81,0	0/0:11,0:11:33.11:0,33,429	1/1:0,26:26:78.25:1103,78,0	1/1:1,18:19:51.17:743,51,0	0/0:8,0:8:24.08:0,24,312	0/0:23,0:23:63.20:0,63,817	0/0:10,0:10:30.10:0,30,390	1/1:1,14:15:42.14:614,42,0	1/1:0,8:8:24.08:349,24,0	0/0:10,0:10:24.08:0,24,312	1/1:0,5:5:12.04:174,12,0	1/1:0,15:15:45.15:654,45,0	1/1:0,35:35:99:1479,105,0	1/1:1,12:13:33.11:479,33,0	0/0:10,0:10:30.10:0,30,390	0/0:16,0:16:48.16:0,48,623	0/0:12,0:12:36.12:0,36,467	1/1:1,17:18:48.16:699,48,0	1/1:2,27:29:81.21:1092,81,0	1/1:0,23:23:66.22:951,66,0	1/1:0,17:17:51.17:738,51,0
chr10	79260905	.	A	AT	7518.10	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=7.531;DP=511;FS=2.394;HRun=2;HaplotypeScore=81.3623;InbreedingCoeff=0.9593;MQ=74.50;MQ0=0;MQRankSum=0.160;QD=20.05;ReadPosRankSum=2.299;VQSLOD=5.0948;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:15:19.48:233,19,0	1/1:5,0:5:11.94:109,12,0	0/0:26,0:14:11.53:0,12,133	0/0:11,0:10:10.11:0,10,124	1/1:27,0:27:62.32:606,62,0	0/0:19,0:19:57.12:0,57,640	0/0:17,0:17:48.02:0,48,506	1/1:30,0:30:71.18:649,71,0	1/1:20,0:20:50.22:336,50,0	1/1:22,1:23:50.86:576,51,0	1/1:19,1:20:27.12:405,27,0	1/1:15,0:15:39.72:272,40,0	1/1:26,0:26:65.17:453,65,0	1/1:23,0:23:61.05:398,61,0	1/1:14,0:14:30.07:309,30,0	1/1:13,0:13:34.83:325,35,0	0/0:24,0:24:65.55:0,66,667	1/1:12,0:12:17.07:158,17,0	1/1:18,0:17:33.97:390,34,0	1/1:19,1:20:48.21:454,48,0	1/1:5,0:5:6.02:64,6,0	0/0:9,0:9:20.14:0,20,190	0/0:14,0:14:39:0,39,380	0/0:16,0:16:39.06:0,39,418	1/1:4,10:14:29.72:389,30,0	1/1:23,0:23:65.17:598,65,0	1/1:39,0:39:61.66:592,62,0	1/1:13,0:13:20.94:202,21,0
chr10	79260907	.	T	TTAA	12546.70	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=2.230;DP=529;FS=1.271;HRun=0;HaplotypeScore=93.7980;InbreedingCoeff=0.9247;MQ=73.17;MQ0=0;MQRankSum=-1.874;QD=31.68;ReadPosRankSum=1.176;VQSLOD=5.3005;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:12.15:90,12,0	1/1:0,4:5:11.95:200,12,0	0/0:25,0:13:13.53:0,14,162	0/0:11,0:10:11.71:0,12,177	1/1:1,21:28:75.45:1188,75,0	0/0:19,0:19:57.16:0,57,911	0/0:16,0:16:48.08:0,48,700	1/1:3,23:28:59.11:1199,59,0	1/1:4,0:20:38.52:183,39,0	1/1:2,16:24:63.56:997,64,0	1/1:2,13:21:50.99:847,51,0	1/1:5,0:15:25.21:154,25,0	1/1:5,0:27:49.43:219,49,0	1/1:4,0:23:43.09:190,43,0	1/1:0,12:14:30.10:652,30,0	1/1:1,10:15:35.48:717,35,0	0/0:21,0:24:69:0,69,958	1/1:0,11:13:18.03:345,18,0	1/1:3,12:20:50.41:887,50,0	1/1:2,15:23:57.05:993,57,0	1/1:1,5:8:6.02:145,6,0	0/0:4,0:9:26.87:0,27,291	0/0:13,0:14:42.04:0,42,529	0/0:15,0:15:45.06:0,45,635	1/1:13,0:16:1.14:197,1,0	1/1:3,19:28:83.94:1339,84,0	1/1:1,32:38:72.23:1456,72,0	1/1:2,12:15:27.09:549,27,0
chr10	79261267	.	GAC	G	2604.88	PASS	AB=1.000;AC=31;AF=0.574;AN=54;BaseQRankSum=4.627;DP=367;FS=2.053;HRun=0;HaplotypeScore=85.0762;InbreedingCoeff=0.7880;MQ=60.76;MQ0=2;MQRankSum=-1.258;QD=13.86;ReadPosRankSum=-3.801;VQSLOD=2.3502;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:11.50:12,0,220	1/1:2,1:3:5.22:32,5,0	./.	0/0:7,0:6:3.72:0,4,33	1/1:11,2:13:22.25:172,22,0	0/0:18,0:18:54.16:0,54,994	0/0:25,0:25:75.26:0,75,1482	1/1:9,0:9:23.92:196,24,0	0/0:3,0:10:6.78:0,7,52	1/1:8,2:9:24.83:215,25,0	1/1:6,0:6:9:81,9,0	0/0:11,0:12:20.02:0,20,197	1/1:8,0:8:1.25:3,1,0	0/0:10,0:11:3.12:0,3,182	1/1:6,0:6:14.78:113,15,0	1/1:4,2:6:9.01:98,9,0	0/0:32,0:32:90.27:0,90,1740	1/1:17,11:28:71.85:686,72,0	1/1:0,1:13:36.33:288,36,0	1/1:0,1:9:5.97:51,6,0	1/1:12,2:14:26.09:191,26,0	0/0:7,0:7:21.07:0,21,424	0/0:9,0:9:24.07:0,24,433	0/0:24,0:24:72.23:0,72,1395	0/0:21,0:21:35.98:0,36,306	1/1:7,3:11:32.95:295,33,0	1/1:9,4:13:29.93:248,30,0	1/1:3,2:5:14.97:129,15,0
chr10	79261268	.	ACGCGCACG	A	2903.14	PASS	AB=1.000;AC=37;AF=0.712;AN=52;BaseQRankSum=7.061;DP=370;FS=7.050;HRun=0;HaplotypeScore=120.9380;InbreedingCoeff=0.5739;MQ=60.57;MQ0=2;MQRankSum=-3.418;QD=11.95;ReadPosRankSum=-0.436;VQSLOD=1.9619;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,7:33:26.93:481,27,0	0/1:3,0:3:0:0,0,0	./.	0/1:7,0:6:12.28:12,0,46	1/1:13,0:13:6.01:74,6,0	0/0:18,0:18:45.06:0,45,1208	0/0:26,0:26:75.17:0,75,2305	1/1:9,0:9:3:27,3,0	1/1:10,0:10:2.80:41,3,0	1/1:10,0:9:12.01:168,12,0	./.	1/1:13,0:13:23.95:218,24,0	1/1:0,8:8:3.01:80,3,0	0/1:12,0:12:57.42:140,0,57	1/1:6,0:6:8.95:69,9,0	1/1:6,0:6:2.97:44,3,0	0/0:32,0:32:87.21:0,87,2942	1/1:28,0:28:56.77:765,57,0	1/1:13,0:13:11.25:111,11,0	1/1:9,0:9:3.01:54,3,0	1/1:14,0:14:5.07:48,5,0	0/0:7,0:7:21.04:0,21,532	0/0:9,0:9:21.04:0,21,498	0/0:26,0:26:75.20:0,75,2432	1/1:13,8:21:26.84:202,27,0	1/1:11,0:11:23.99:316,24,0	1/1:12,0:12:8.96:151,9,0	1/1:5,0:5:6.01:77,6,0
chr10	79261270	.	GCGCA	G	2616.94	PASS	AB=0.833;AC=38;AF=0.731;AN=52;BaseQRankSum=8.681;DP=352;FS=6.827;HRun=0;HaplotypeScore=92.5639;InbreedingCoeff=0.6730;MQ=60.51;MQ0=2;MQRankSum=-0.532;QD=11.84;ReadPosRankSum=-0.429;VQSLOD=2.4548;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:26.92:289,27,0	0/1:1,1:2:0:0,0,0	./.	0/1:7,0:6:13.33:19,0,13	1/1:8,0:8:6.01:71,6,0	0/0:19,0:19:48.50:0,48,818	0/0:27,0:27:75.12:0,75,1411	1/1:7,0:7:3:27,3,0	1/1:8,0:8:2.80:39,3,0	1/1:8,1:8:12.01:137,12,0	./.	1/1:13,0:13:23.95:212,24,0	1/1:8,0:8:2.98:45,3,0	1/1:12,0:12:20.13:193,20,0	1/1:5,0:5:8.95:69,9,0	1/1:5,1:6:6.01:73,6,0	0/0:32,0:32:87.16:0,87,1767	1/1:20,7:27:56.77:717,57,0	1/1:12,1:13:17.84:152,18,0	1/1:8,1:9:3.01:48,3,0	1/1:11,2:13:9.46:76,9,0	0/0:8,0:8:21.03:0,21,348	0/0:9,0:9:23.99:0,24,324	0/0:26,0:26:78.19:0,78,1523	1/1:18,0:18:26.84:202,27,0	1/1:7,3:10:23.98:258,24,0	1/1:8,1:9:8.96:100,9,0	1/1:5,0:5:5.98:68,6,0
chr10	79261272	.	GCA	G	2058.45	PASS	AB=1.000;AC=38;AF=0.731;AN=52;BaseQRankSum=8.740;DP=340;FS=10.360;HRun=0;HaplotypeScore=80.7419;InbreedingCoeff=0.6616;MQ=60.69;MQ0=2;MQRankSum=0.192;QD=10.09;ReadPosRankSum=-1.759;VQSLOD=2.2550;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:25,6:31:26.78:234,27,0	0/1:2,0:2:0:0,0,0	./.	0/1:7,0:6:9.79:13,0,10	1/1:6,1:7:6:55,6,0	0/0:19,0:19:7.42:0,7,527	0/0:29,0:29:63.50:0,63,1012	1/1:5,0:5:3:27,3,0	1/1:8,0:8:2.76:20,3,0	1/1:5,1:5:11.99:104,12,0	./.	1/1:12,1:13:23.92:190,24,0	1/1:8,0:8:3:27,3,0	1/1:11,0:11:20.46:165,20,0	1/1:5,0:5:8.95:69,9,0	1/1:4,1:5:6.01:65,6,0	0/0:28,7:35:65.89:0,66,1213	1/1:22,4:26:56.71:506,57,0	1/1:13,0:13:17.83:133,18,0	1/1:9,0:9:3:29,3,0	1/1:12,0:12:9.88:77,10,0	0/0:8,0:8:21.03:0,21,262	0/0:9,0:9:14.02:0,14,199	0/0:26,0:26:74.75:0,75,973	1/1:17,1:18:26.84:202,27,0	1/1:8,0:8:23.86:194,24,0	1/1:5,3:8:8.94:71,9,0	1/1:2,0:2:5.97:50,6,0
chr10	79261289	.	CGCGCGCGAGAGA	C	1999.18	PASS	AB=1.000;AC=28;AF=0.583;AN=48;BaseQRankSum=8.927;DP=363;FS=0.000;HRun=0;HaplotypeScore=122.5583;InbreedingCoeff=0.2557;MQ=51.07;MQ0=9;MQRankSum=-4.772;QD=9.47;ReadPosRankSum=1.158;VQSLOD=2.2656;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,5:37:14.91:189,15,0	./.	./.	0/1:5,0:4:9.66:12,0,10	1/1:8,0:8:2.91:43,3,0	0/0:14,0:14:36.11:0,36,1363	0/0:28,0:28:78.25:0,78,2829	0/0:11,0:9:0.47:0,0,1	0/1:13,0:10:44.47:48,0,44	1/1:9,0:8:3.24:236,3,0	./.	0/1:8,0:9:36.24:36,0,154	1/1:13,0:11:0.43:41,0,0	0/1:14,0:13:50.64:51,0,428	./.	1/1:5,0:4:6.02:102,6,0	0/0:34,0:34:78.13:0,78,3446	1/1:27,0:27:30.49:789,30,0	1/1:11,0:10:4.85:89,5,0	1/1:6,0:5:3.01:49,3,0	1/1:12,0:11:1.25:3,1,0	0/0:9,0:8:18.06:0,18,469	0/0:12,0:11:33.11:0,33,986	0/0:28,0:27:81.23:0,81,3451	1/1:15,1:16:0.47:1,0,0	0/1:9,0:8:16.87:153,0,17	1/1:9,0:9:9.03:258,9,0	0/1:7,0:6:30.34:53,0,30
chr10	79261293	.	CGCGAGAGA	C	1012.70	PASS	AB=1.000;AC=29;AF=0.580;AN=50;BaseQRankSum=8.658;DP=369;FS=0.000;HRun=0;HaplotypeScore=108.6425;InbreedingCoeff=0.4018;MQ=50.54;MQ0=10;MQRankSum=-5.169;QD=4.65;ReadPosRankSum=0.320;VQSLOD=1.6410;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:36:10.91:56,11,0	./.	./.	0/1:5,0:4:0.91:1,0,11	1/1:9,0:9:2.28:12,2,0	0/0:13,0:13:12.28:0,12,715	0/0:29,0:29:67.16:0,67,1989	1/1:15,0:13:0.62:5,1,0	0/1:11,0:8:11.11:11,0,44	1/1:9,1:9:11.18:187,11,0	./.	0/1:9,0:9:2.89:3,0,149	0/1:14,0:12:6.91:7,0,71	0/0:14,0:13:2.16:0,2,370	1/1:2,0:2:3.01:57,3,0	1/1:4,1:4:5.85:69,6,0	0/0:33,0:32:71.94:0,72,2250	1/1:24,0:27:46.53:422,47,0	1/1:13,0:12:4.41:68,4,0	1/1:7,0:6:3.31:15,3,0	1/1:11,0:10:0.89:2,1,0	0/0:11,0:10:26.99:0,27,468	0/0:11,0:10:29.94:0,30,664	0/0:28,0:27:78.14:0,78,2312	0/1:17,0:16:0:1,0,0	0/1:9,0:8:1.37:51,0,1	1/1:7,3:10:9.03:198,9,0	0/1:7,0:6:3.98:4,0,20
chr10	79261295	.	CGAGAGA	C	722.09	PASS	AB=0.739;AC=20;AF=0.455;AN=44;BaseQRankSum=5.578;DP=385;FS=6.937;HRun=0;HaplotypeScore=103.5956;InbreedingCoeff=0.5675;MQ=48.55;MQ0=11;MQRankSum=-4.247;QD=4.27;ReadPosRankSum=-0.749;VQSLOD=0.8561;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,13:36:0.04:0,0,0	./.	./.	./.	0/1:4,6:10:0:0,0,0	0/0:14,0:14:18.06:0,18,439	0/0:28,0:28:54.17:0,54,1410	1/1:12,3:13:1.78:7,2,0	0/0:11,0:8:3.01:0,3,50	1/1:5,7:12:11.42:185,11,0	./.	0/0:11,0:11:6.02:0,6,153	0/0:16,0:13:4.37:0,4,78	0/0:20,0:19:23.75:0,24,559	1/1:2,0:2:3.01:57,3,0	1/1:5,0:4:3.01:55,3,0	0/0:32,0:31:57.04:0,57,1495	1/1:19,0:27:15.05:254,15,0	1/1:11,1:11:2.10:55,2,0	./.	1/1:12,0:11:3.90:57,4,0	0/0:13,0:12:18.06:0,18,398	0/0:10,0:9:18.06:0,18,523	0/0:28,0:28:63.19:0,63,1689	0/1:10,8:17:0:0,0,0	0/1:8,1:8:9.03:21,0,9	1/1:5,5:10:9.03:173,9,0	./.
chr10	79262439	.	T	TAC	5216.52	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-13.060;DP=797;FS=1.274;HRun=0;HaplotypeScore=91.6956;InbreedingCoeff=0.9997;MQ=93.57;MQ0=0;MQRankSum=-0.709;QD=46.58;ReadPosRankSum=3.333;VQSLOD=6.3849;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,169,2271	0/0:21,0:21:57.19:0,57,783	0/0:31,0:31:87.26:0,87,1134	0/0:37,0:37:87.26:0,87,1156	0/0:32,0:32:90.30:0,90,1236	0/0:11,0:11:27.09:0,27,370	0/0:31,0:31:90.28:0,90,1218	0/0:38,0:38:99:0,102,1370	1/1:3,30:33:87.30:1544,87,0	0/0:30,0:30:81.27:0,81,1113	0/0:12,0:12:36.10:0,36,476	1/1:1,28:29:75.26:1331,75,0	1/1:2,21:23:63.22:1118,63,0	1/1:0,25:27:69.24:1224,69,0	0/0:36,0:36:96.30:0,96,1302	0/0:25,0:25:75.24:0,75,1013	0/0:33,0:33:93.31:0,93,1278	0/0:27,0:27:72.24:0,72,988	0/0:24,0:24:63.21:0,63,865	0/0:30,0:30:90.30:0,90,1237	0/0:39,0:39:99:0,108,1482	0/0:22,0:22:60.20:0,60,825	0/0:23,0:23:66.22:0,66,907	0/0:29,0:29:87.27:0,87,1178	0/0:24,0:24:69.23:0,69,947	0/0:32,0:32:86.67:0,87,1195	0/0:24,0:24:63.21:0,63,866	0/0:14,0:14:42.14:0,42,577
chr10	79263081	.	C	CT	6965.28	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.950;DP=737;FS=0.329;HRun=1;HaplotypeScore=84.3785;InbreedingCoeff=0.9996;MQ=83.47;MQ0=0;MQRankSum=-3.721;QD=39.58;ReadPosRankSum=1.281;VQSLOD=5.3449;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:34:93.25:1340,93,0	0/0:16,0:16:42.14:0,42,545	0/0:22,0:22:63.15:0,63,785	0/0:23,0:23:56.32:0,56,655	0/0:21,0:21:63.19:0,63,802	0/0:22,0:21:63.17:0,63,787	0/0:34,0:34:99:0,99,1285	0/0:40,0:40:99:0,117,1494	1/1:1,18:19:48.16:719,48,0	0/0:26,0:26:66.21:0,66,857	0/0:27,0:27:81.24:0,81,1033	1/1:1,20:21:54.18:809,54,0	1/1:2,40:42:99:1699,114,0	1/1:1,34:35:93.32:1394,93,0	0/0:30,0:29:87.27:0,87,1115	0/0:24,0:24:69.21:0,69,882	0/0:23,0:23:66.18:0,66,826	0/0:30,0:30:84.23:0,84,1058	0/0:25,0:25:69.10:0,69,854	0/0:25,0:25:75.24:0,75,973	0/0:31,0:31:84.23:0,84,1070	0/0:18,0:18:54.18:0,54,701	0/0:24,0:24:72.22:0,72,920	0/0:30,0:30:90.25:0,90,1126	1/1:2,23:25:69.21:1004,69,0	0/0:29,0:29:87.28:0,87,1129	0/0:33,0:33:99:0,99,1283	0/0:8,0:8:24.08:0,24,312
chr10	79263108	.	C	CT	1623.55	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.816;DP=697;FS=5.149;HRun=7;HaplotypeScore=87.5407;InbreedingCoeff=0.9793;MQ=76.66;MQ0=0;MQRankSum=-4.333;QD=26.19;ReadPosRankSum=-1.933;VQSLOD=3.3597;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,29:35:84.17:981,84,0	0/0:13,0:13:33.05:0,33,319	0/0:16,0:16:26.62:0,27,216	0/0:13,0:13:10.93:0,11,100	0/0:19,0:19:57.09:0,57,550	0/0:23,0:22:66.10:0,66,637	0/0:26,0:26:66.10:0,66,637	0/0:41,0:41:90.12:0,90,865	0/0:20,0:20:45.06:0,45,435	0/0:32,0:32:81.12:0,81,782	0/0:22,0:22:48.06:0,48,463	0/0:26,0:26:66.10:0,66,636	0/0:33,0:33:81.13:0,81,782	0/0:30,0:30:78.12:0,78,753	0/0:30,0:29:87.14:0,87,840	0/0:21,0:21:60.08:0,60,574	0/0:21,0:21:54.08:0,54,522	0/0:33,0:33:87.14:0,87,840	0/0:25,0:25:51.07:0,51,492	0/0:21,0:21:57.09:0,57,550	0/0:23,0:23:69.11:0,69,666	0/0:19,0:19:54.09:0,54,521	0/0:23,0:23:66.09:0,66,632	0/0:26,0:26:72.10:0,72,689	1/1:7,20:27:66.16:764,66,0	0/0:37,0:37:99:0,105,1010	0/0:29,0:29:81.13:0,81,782	0/0:13,0:13:30.05:0,30,290
chr10	79263867	.	C	CA	218.91	PASS	AB=0.754;AC=2;AF=0.036;AN=56;BaseQRankSum=5.497;DP=852;FS=0.000;HRun=0;HaplotypeScore=79.9721;InbreedingCoeff=-0.0371;MQ=67.97;MQ0=5;MQRankSum=-5.432;QD=5.34;ReadPosRankSum=3.306;VQSLOD=3.2823;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:64:99:0,187,2541	0/0:10,0:10:30.10:0,30,420	0/0:47,0:35:99:0,105,1431	0/0:32,0:25:75.24:0,75,1034	0/0:28,1:28:84.27:0,84,1157	0/0:21,0:21:60.20:0,60,838	0/0:26,2:27:30.41:0,30,996	0/0:48,0:48:99:0,144,1979	0/0:24,0:24:72.24:0,72,1007	0/0:46,0:46:99:0,126,1748	0/0:26,0:25:75.23:0,75,1029	0/0:31,0:31:90.30:0,90,1258	0/0:24,0:24:72.21:0,72,972	0/0:33,0:33:99:0,99,1366	0/0:34,0:34:99:0,102,1408	0/0:30,0:30:90.30:0,90,1257	0/0:29,1:29:87.29:0,87,1217	0/0:31,0:30:87.27:0,87,1196	0/0:25,1:25:24.31:0,24,917	0/0:22,0:22:66.22:0,66,922	0/0:35,0:35:99:0,102,1410	0/0:23,0:23:66.22:0,66,922	0/0:28,0:28:81.27:0,81,1129	0/0:38,0:38:99:0,114,1593	0/0:21,0:21:63.21:0,63,881	0/1:29,5:34:99:137,0,1114	0/0:30,0:30:87.27:0,87,1198	0/1:3,4:7:99:170,0,105
chr10	79264808	.	TA	T	3089.55	PASS	AB=0.939;AC=37;AF=0.661;AN=56;BaseQRankSum=1.558;DP=584;FS=2.864;HRun=8;HaplotypeScore=84.7255;InbreedingCoeff=0.7331;MQ=76.89;MQ0=8;MQRankSum=0.200;QD=7.78;ReadPosRankSum=-2.309;VQSLOD=1.3109;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:39,1:40:34.13:264,34,0	1/1:14,1:15:13.63:106,14,0	0/0:48,0:14:19.42:0,19,177	0/0:35,0:19:4.49:0,4,55	1/1:31,2:33:44.87:344,45,0	0/0:14,0:14:36.06:0,36,378	0/0:14,0:14:21.04:0,21,226	1/1:31,0:31:30.62:192,31,0	1/1:5,4:10:23.04:154,23,0	1/1:21,0:21:24.64:173,25,0	1/1:23,0:23:33.02:248,33,0	1/1:10,3:15:29.63:187,30,0	1/1:10,6:16:32.12:240,32,0	1/1:12,7:20:39.32:273,39,0	0/1:22,2:24:1.64:144,0,2	1/1:11,2:13:10.40:74,10,0	0/0:22,0:22:50.46:0,50,507	0/1:22,3:25:14.63:123,0,15	0/1:14,0:14:1.67:61,0,2	1/1:15,1:16:10.35:116,10,0	1/1:7,0:7:17.84:131,18,0	0/0:13,0:13:29.41:0,29,280	0/0:22,0:22:55.59:0,56,544	0/0:15,0:15:30.05:0,30,311	1/1:19,1:20:24.09:145,24,0	1/1:18,0:18:23.59:172,24,0	1/1:25,0:25:3.02:104,3,0	1/1:11,0:11:3.44:39,3,0
chr10	79265315	.	T	TA	1312.82	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.631;DP=532;FS=3.540;HRun=9;HaplotypeScore=48.5177;InbreedingCoeff=0.9399;MQ=67.55;MQ0=0;MQRankSum=-0.213;QD=25.74;ReadPosRankSum=0.566;VQSLOD=4.2291;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:81.69:897,82,0	0/0:11,0:12:35.01:0,35,288	0/0:7,0:8:8.97:0,9,73	0/0:4,0:4:8.94:0,9,70	0/0:24,0:24:65.97:0,66,571	0/0:24,0:24:62.96:0,63,544	0/0:13,0:13:35.98:0,36,312	0/0:34,0:34:77.61:0,78,655	0/0:19,0:19:53.99:0,54,469	0/0:20,0:21:53.97:0,54,467	0/0:19,0:19:47.98:0,48,414	0/0:14,0:14:38.97:0,39,335	0/0:23,0:23:68.78:0,69,575	0/0:20,0:20:56.95:0,57,490	0/0:25,0:25:62.96:0,63,543	0/0:19,1:20:23.79:0,24,431	0/0:14,0:14:35.99:0,36,312	0/0:19,0:19:47.95:0,48,410	0/0:23,0:23:44.99:0,45,391	0/0:30,0:30:71.97:0,72,625	0/0:18,0:18:41.96:0,42,360	0/0:18,0:18:47.99:0,48,417	0/0:22,0:22:56.74:0,57,500	0/0:9,0:9:26.99:0,27,234	1/1:2,19:21:51.06:537,51,0	0/0:14,0:14:35.97:0,36,310	0/0:24,0:24:65.98:0,66,573	0/0:10,0:10:26.99:0,27,234
chr10	79266431	.	ATG	A	527.92	PASS	AB=1.000;AC=23;AF=0.575;AN=40;BaseQRankSum=0.523;DP=98;FS=1.411;HRun=0;HaplotypeScore=17.3014;InbreedingCoeff=0.5208;MQ=69.74;MQ0=3;MQRankSum=1.138;QD=12.00;ReadPosRankSum=-1.024;VQSLOD=2.6063;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:4,0:3:0.27:0,0,0	./.	1/1:4,0:4:2.99:24,3,0	0/0:3,0:3:8.98:0,9,72	0/0:3,0:3:5.99:0,6,49	1/1:4,8:11:23.88:189,24,0	./.	1/1:4,0:4:11.98:104,12,0	0/0:8,0:8:0:0,0,0	./.	1/1:1,0:1:2.99:23,3,0	./.	1/1:1,0:1:3:25,3,0	1/1:2,0:2:3:25,3,0	0/0:16,0:16:8.10:0,8,141	1/1:7,0:7:14.88:107,15,0	1/1:5,0:5:8.98:74,9,0	1/1:1,0:1:3:25,3,0	./.	0/0:2,0:2:2.99:0,3,24	0/0:5,0:5:8.98:0,9,72	0/1:2,0:2:0:0,0,0	1/1:2,0:2:2.49:9,2,0	1/1:3,0:3:6:53,6,0	./.	0/0:3,0:1:2.99:0,3,24
chr10	79266443	.	GTGTATATATATATA	G	470.80	PASS	AB=1.000;AC=19;AF=0.500;AN=38;BaseQRankSum=-1.012;DP=74;FS=1.336;HRun=0;HaplotypeScore=32.6058;InbreedingCoeff=0.5413;MQ=67.11;MQ0=3;MQRankSum=1.953;QD=13.85;ReadPosRankSum=0.571;VQSLOD=1.3194;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:0,0:1:3.01:0,3,80	0/1:3,0:2:0.26:0,0,0	./.	1/1:2,0:2:2.99:24,3,0	0/0:3,0:3:8.98:0,9,72	0/0:2,0:2:5.99:0,6,49	1/1:11,0:10:6.85:169,7,0	./.	1/1:4,0:4:11.98:104,12,0	0/0:0,6:6:0.89:0,1,2	./.	1/1:1,0:1:2.99:23,3,0	./.	0/0:1,0:1:3.01:0,3,43	1/1:1,0:1:3:25,3,0	0/0:12,0:12:26.97:0,27,299	1/1:6,0:6:14.88:107,15,0	1/1:3,0:3:8.98:74,9,0	1/1:1,0:1:3:25,3,0	./.	0/0:1,0:1:2.99:0,3,24	0/0:3,0:3:8.98:0,9,72	./.	./.	1/1:2,0:2:6:53,6,0	./.	0/0:4,0:2:2.99:0,3,24
chr10	79266517	.	CGT	C	435.41	PASS	AB=0.886;AC=18;AF=0.391;AN=46;BaseQRankSum=5.159;DP=236;FS=2.999;HRun=0;HaplotypeScore=36.5322;InbreedingCoeff=-0.0588;MQ=50.77;MQ0=13;MQRankSum=-0.958;QD=3.54;ReadPosRankSum=-0.496;VQSLOD=1.2198;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,5:8:8.81:97,9,0	./.	./.	./.	0/0:7,0:6:3.01:0,3,45	0/0:5,0:4:9.03:0,9,128	0/1:7,1:7:17.88:18,0,142	0/0:21,0:20:3.01:0,3,42	1/1:2,0:7:5.68:28,6,0	0/1:8,1:7:3.24:27,0,3	0/0:4,0:4:3.01:0,3,45	0/1:3,0:8:14.13:20,0,14	1/1:0,0:3:2.84:14,3,0	./.	./.	0/0:8,0:8:21.53:0,22,295	0/1:16,2:18:31.84:32,0,289	0/1:7,1:6:19.26:24,0,19	0/1:8,0:7:14.89:27,0,15	0/0:9,0:9:6.02:0,6,90	0/1:11,1:11:26.92:27,0,39	0/1:5,1:6:21.87:22,0,85	0/1:7,1:7:21.26:21,0,102	0/0:11,0:10:27.06:0,27,380	1/1:5,6:11:18.05:198,18,0	0/1:8,0:7:26.80:27,0,39	0/0:6,0:6:12.01:0,12,157	0/0:11,0:10:4.82:0,5,197
chr10	79267325	.	CTCTA	C	2552.03	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.580;DP=721;FS=17.971;HRun=0;HaplotypeScore=134.5892;InbreedingCoeff=0.9328;MQ=58.00;MQ0=4;MQRankSum=0.895;QD=27.15;ReadPosRankSum=1.584;VQSLOD=2.3481;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:48:4.86:0,5,168	0/0:13,0:13:33.11:0,33,773	0/0:19,0:11:6.02:0,6,114	0/0:18,0:11:14.41:0,14,246	0/0:29,0:29:63.22:0,63,1515	0/0:24,0:24:57.20:0,57,1358	0/0:15,0:15:36.04:0,36,772	0/0:28,0:28:39.13:0,39,860	1/1:7,20:27:39.13:641,39,0	0/0:24,0:24:60.21:0,60,1358	0/0:20,0:21:51.16:0,51,1140	1/1:2,24:26:48.16:789,48,0	1/1:3,21:24:42.14:690,42,0	1/1:3,14:17:36.12:592,36,0	0/0:38,0:38:93.32:0,93,2237	0/0:32,0:32:81.28:0,81,1925	0/0:24,0:24:57.15:0,57,1339	0/0:23,0:22:48.41:0,48,1055	0/0:28,0:28:45.13:0,45,968	0/0:28,0:28:63.22:0,63,1539	0/0:23,0:23:60.21:0,60,1444	0/0:19,0:19:51.16:0,51,1164	0/0:24,0:24:45.15:0,45,1089	0/0:15,0:15:33.10:0,33,725	0/0:43,0:44:41.43:0,41,437	0/0:38,0:38:84.18:0,84,1899	0/0:35,0:35:87.30:0,87,2052	0/0:15,0:17:33.31:0,33,951
chr10	79267351	.	C	CT	511.84	PASS	AB=0.824;AC=3;AF=0.054;AN=56;BaseQRankSum=4.462;DP=716;FS=2.451;HRun=1;HaplotypeScore=105.8529;InbreedingCoeff=-0.0636;MQ=56.21;MQ0=6;MQRankSum=-2.490;QD=4.57;ReadPosRankSum=-0.978;VQSLOD=0.1444;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:44,2:46:19.13:19,0,317	0/0:12,0:12:36.12:0,36,503	0/0:9,0:2:6:0,6,65	0/0:11,0:5:12.04:0,12,168	0/0:27,0:27:81.27:0,81,1133	0/0:24,0:24:72.21:0,72,987	0/0:13,0:13:39.11:0,39,525	0/0:39,0:39:99:0,111,1497	0/0:25,0:25:44.70:0,45,351	0/0:24,0:24:72.23:0,72,992	0/0:24,0:24:60.36:0,60,855	0/0:29,0:29:57.46:0,57,531	0/0:25,0:25:20.35:0,20,246	0/0:19,0:19:34.46:0,34,379	0/0:37,0:37:99:0,111,1527	0/0:33,0:33:99:0,99,1385	0/0:28,2:30:78.23:0,78,1086	0/1:20,4:23:76.56:77,0,690	0/0:17,0:16:42.14:0,42,587	0/0:30,0:30:84.28:0,84,1175	0/0:27,0:27:78.25:0,78,1074	0/0:24,0:23:69.22:0,69,947	0/0:22,0:22:66.19:0,66,888	0/0:19,1:20:9.89:0,10,708	0/1:20,22:42:99:515,0,306	0/0:32,0:32:89.94:0,90,1195	0/0:35,0:35:99:0,102,1424	0/0:16,0:15:43.54:0,44,561
chr10	79268729	.	C	CT	2932.20	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=3.199;DP=627;FS=13.599;HRun=9;HaplotypeScore=68.9203;InbreedingCoeff=0.8702;MQ=73.01;MQ0=0;MQRankSum=2.125;QD=22.38;ReadPosRankSum=1.935;VQSLOD=3.5597;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:57.13:619,57,0	0/0:14,0:14:41.30:0,41,334	0/0:13,0:12:2.79:0,3,107	0/1:10,0:10:13.71:14,0,41	0/0:37,0:37:95.93:0,96,826	0/0:16,0:16:38.99:0,39,339	0/0:15,0:15:35.96:0,36,308	0/0:34,0:35:73.99:0,74,626	1/1:2,11:13:24.06:265,24,0	0/0:24,0:24:56.91:0,57,484	0/0:27,0:27:71.98:0,72,624	1/1:2,20:22:45.12:498,45,0	1/1:1,22:23:56.85:630,57,0	1/1:0,15:15:36.10:398,36,0	0/0:20,0:20:59.90:0,60,508	0/0:19,0:19:44.95:0,45,382	0/0:26,0:27:61.98:0,62,520	0/0:18,0:18:50.99:0,51,443	0/0:21,0:21:35.73:0,36,296	0/0:36,0:36:93.51:0,94,777	0/0:10,0:10:20.98:0,21,180	0/0:23,0:23:50.97:0,51,443	0/0:25,0:25:62.94:0,63,539	0/0:29,0:28:77.96:0,78,673	1/1:1,24:25:63.17:697,63,0	0/0:31,1:32:50.78:0,51,666	0/0:30,1:31:53.77:0,54,689	0/0:24,0:24:62.98:0,63,547
chr10	79269259	.	C	CAA	1051.05	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-4.711;DP=549;FS=0.000;HRun=9;HaplotypeScore=65.9730;InbreedingCoeff=0.9346;MQ=72.39;MQ0=1;MQRankSum=-1.041;QD=20.61;ReadPosRankSum=-0.363;VQSLOD=2.2864;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.03:0,45,465	0/0:12,0:12:30.02:0,30,298	0/0:13,0:12:15.01:0,15,155	0/0:11,0:10:20.54:0,21,200	0/0:32,0:32:90.22:0,90,958	0/0:24,0:24:69.17:0,69,734	0/0:4,0:4:12.03:0,12,128	0/0:24,0:25:60.10:0,60,688	0/0:23,0:24:62.89:0,63,651	0/0:21,0:22:56.88:0,57,587	0/0:24,0:24:63.12:0,63,670	1/1:5,7:11:15.05:231,15,0	1/1:6,16:22:39.13:591,39,0	1/1:4,12:16:24.08:369,24,0	0/0:27,0:27:78.14:0,78,803	0/0:14,0:13:42.11:0,42,447	0/0:23,0:23:51.08:0,51,543	0/0:12,0:12:14.91:0,15,273	0/0:23,0:23:60.14:0,60,639	0/0:23,0:24:62.86:0,63,635	0/0:17,0:17:48.12:0,48,511	0/0:20,0:20:48.10:0,48,511	0/0:23,0:23:63.14:0,63,661	0/0:15,0:16:50.60:0,51,503	0/0:28,0:27:78.18:0,78,830	0/0:26,0:26:75.19:0,75,798	0/0:33,0:33:93.23:0,93,989	0/0:3,0:3:6.02:0,6,64
chr10	79269497	.	G	GA	4217.95	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-11.365;DP=602;FS=0.819;HRun=4;HaplotypeScore=55.7939;InbreedingCoeff=0.9979;MQ=80.35;MQ0=1;MQRankSum=-0.827;QD=34.57;ReadPosRankSum=3.751;VQSLOD=5.2415;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:60.20:821,60,0	0/0:10,0:10:30.09:0,30,340	0/0:22,0:22:52.11:0,52,545	0/0:12,0:11:21.05:0,21,228	0/0:22,0:22:63.18:0,63,713	0/0:29,0:29:78.21:0,78,874	0/0:25,0:25:69.18:0,69,772	0/0:27,0:27:78.22:0,78,877	0/0:19,0:19:54.15:0,54,612	0/0:20,0:20:54.15:0,54,612	0/0:23,0:23:66.19:0,66,749	1/1:2,15:17:39.13:534,39,0	1/1:3,25:28:72.24:985,72,0	1/1:7,16:23:60.16:770,60,0	0/0:22,0:22:60.16:0,60,671	0/0:26,0:26:72.20:0,72,816	0/0:13,0:13:39.11:0,39,442	0/0:13,0:13:33.09:0,33,374	0/0:26,0:26:72.20:0,72,816	0/0:31,0:31:90.26:0,90,1020	0/0:24,0:24:66.19:0,66,747	0/0:18,0:18:54.15:0,54,613	0/0:23,0:23:60.15:0,60,671	0/0:20,0:20:60.17:0,60,681	1/1:0,30:30:81.27:1108,81,0	0/0:16,0:16:45.11:0,45,501	0/0:32,0:31:93.26:0,93,1055	0/0:7,0:7:21.06:0,21,238
chr10	79271889	.	CTT	C	1139	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.196;DP=644;FS=8.244;HRun=14;HaplotypeScore=82.6492;InbreedingCoeff=0.7568;MQ=68.66;MQ0=4;MQRankSum=0.933;QD=12.25;ReadPosRankSum=4.753;VQSLOD=2.3264;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:36:63:0,63,628	0/0:4,0:5:11.50:0,12,116	0/0:17,0:14:14.23:0,14,144	0/0:10,0:9:9.24:0,9,119	0/0:28,0:29:42.09:0,42,526	0/0:25,0:27:63.13:0,63,794	0/0:17,1:16:2.29:0,2,314	0/0:29,0:31:48.50:0,48,483	0/0:8,0:16:20.54:0,21,220	0/0:24,0:24:14.41:0,14,486	0/0:19,0:19:35.91:0,36,399	1/1:6,22:28:53.98:500,54,0	1/1:8,21:29:44.62:416,45,0	1/1:12,22:34:41.55:363,42,0	0/0:14,0:14:39.11:0,39,521	0/0:19,2:22:1.12:0,1,597	0/0:31,0:31:75.13:0,75,1004	0/0:13,0:18:38.55:0,39,416	0/0:22,0:23:47.50:0,48,523	0/0:21,2:23:1.43:0,1,523	0/0:23,1:26:17.24:0,17,471	0/0:23,0:25:38.60:0,39,485	0/0:13,0:15:9.68:0,10,291	0/0:22,0:26:59.08:0,59,690	0/0:11,0:30:45.03:0,45,432	0/0:21,0:27:62.80:0,63,628	0/0:18,0:24:47.84:0,48,482	0/0:12,0:13:26.53:0,27,323
chr10	79273492	.	C	CT	358.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.984;DP=536;FS=10.022;HRun=6;HaplotypeScore=70.6617;InbreedingCoeff=0.9565;MQ=79.53;MQ0=0;MQRankSum=0.764;QD=22.39;ReadPosRankSum=1.362;VQSLOD=2.3734;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:60.13:0,60,612	0/0:6,0:6:15.03:0,15,153	0/0:12,0:12:13.69:0,14,165	0/0:15,0:16:25.77:0,26,186	0/0:20,0:20:54.12:0,54,550	0/0:17,0:17:51.10:0,51,513	0/0:18,0:18:48.09:0,48,482	0/0:30,0:30:72.16:0,72,734	1/1:4,12:16:36.12:453,36,0	0/0:19,0:19:57.13:0,57,581	0/0:15,0:15:24.04:0,24,245	0/0:20,0:20:51.11:0,51,520	0/0:28,0:28:75.17:0,75,764	0/0:28,0:28:75.17:0,75,765	0/0:24,0:24:69.16:0,69,704	0/0:8,0:8:24.05:0,24,245	0/0:27,0:27:69.15:0,69,703	0/0:11,0:11:27.06:0,27,275	0/0:14,0:15:44.11:0,44,425	0/0:35,0:35:99:0,102,1040	0/0:15,0:15:39.08:0,39,398	0/0:20,0:20:51.11:0,51,520	0/0:19,0:19:57.10:0,57,567	0/0:10,0:10:27.06:0,27,275	0/0:22,0:22:60.13:0,60,611	0/0:17,0:16:45.10:0,45,459	0/0:32,0:32:93.21:0,93,948	0/0:12,0:12:30.06:0,30,306
chr10	79273518	.	GA	G	1358.38	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.851;DP=547;FS=5.815;HRun=9;HaplotypeScore=64.9389;InbreedingCoeff=0.9426;MQ=74.38;MQ0=0;MQRankSum=-0.329;QD=19.41;ReadPosRankSum=2.692;VQSLOD=4.3165;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:63.17:0,63,716	0/0:10,0:10:30.09:0,30,346	0/0:12,1:13:6.08:0,6,156	0/0:11,0:10:11.03:0,11,115	0/0:29,0:29:84.25:0,84,969	0/0:16,0:16:42.10:0,42,465	0/0:16,0:16:45.13:0,45,519	0/0:34,0:34:81.22:0,81,923	0/0:14,0:14:42.12:0,42,485	0/0:23,0:23:66.18:0,66,743	0/0:31,0:31:62.90:0,63,968	1/1:2,17:19:41.95:375,42,0	1/1:3,18:21:54.02:494,54,0	1/1:4,26:30:69.03:632,69,0	0/0:24,0:24:66.18:0,66,749	0/0:10,0:10:27.08:0,27,312	0/0:24,0:24:63.19:0,63,725	0/0:10,0:10:30.09:0,30,343	0/0:17,0:17:42.12:0,42,483	0/0:31,0:31:90.25:0,90,1027	0/0:6,0:6:15.04:0,15,173	0/0:18,0:18:48.14:0,48,553	0/0:19,0:19:54.14:0,54,609	0/0:6,0:6:18.05:0,18,208	0/0:19,0:19:51.15:0,51,589	0/0:21,0:20:63.19:0,63,727	0/0:39,0:39:99:0,108,1213	0/0:14,0:14:30.09:0,30,346
chr10	79274559	.	TTTTATATTTATGTTACCAACTATCCTAAATA	T	3162.55	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.282;DP=456;FS=12.967;HRun=0;HaplotypeScore=321.6379;InbreedingCoeff=0.8689;MQ=64.95;MQ0=0;MQRankSum=-6.287;QD=79.06;ReadPosRankSum=3.279;VQSLOD=1.5239;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:3.01:108,3,0	0/0:4,0:4:12.04:0,12,1337	0/0:5,0:5:9.03:0,9,543	0/0:4,0:4:12.04:0,12,440	0/0:19,0:19:57.20:0,57,7638	0/0:20,0:20:60.21:0,60,7056	0/0:9,0:9:27.09:0,27,2720	0/0:23,0:23:63.21:0,63,5820	1/1:1,3:4:9.03:734,9,0	0/0:29,0:29:81.28:0,81,9052	0/0:22,0:22:66.23:0,66,7366	0/0:14,0:14:42.14:0,42,5041	0/0:24,0:24:72.24:0,72,7862	0/0:13,0:13:39.13:0,39,4721	0/0:15,0:15:45.15:0,45,5595	0/0:19,0:19:54.18:0,54,6390	0/0:19,0:19:54.18:0,54,6217	0/0:12,0:12:36.12:0,36,4548	0/0:16,0:16:45.15:0,45,4777	0/0:29,0:29:84.29:0,84,9909	0/0:9,0:9:27.09:0,27,2767	0/0:10,0:10:30.10:0,30,3486	0/0:21,0:21:63.19:0,63,6369	0/0:10,0:10:30.10:0,30,3739	1/1:0,28:28:30.10:2446,30,0	0/0:28,0:28:81.28:0,81,9988	0/0:29,0:29:87.30:0,87,10152	0/0:13,0:13:39.13:0,39,5288
chr10	79274640	.	AT	A	181.93	PASS	AB=0.917;AC=3;AF=0.056;AN=54;BaseQRankSum=5.198;DP=439;FS=0.000;HRun=7;HaplotypeScore=48.9534;InbreedingCoeff=0.6729;MQ=58.51;MQ0=0;MQRankSum=-0.946;QD=8.66;ReadPosRankSum=-0.691;VQSLOD=0.0328;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:30.08:0,30,364	0/0:6,0:6:18.06:0,18,226	0/0:5,0:4:9.03:0,9,108	./.	0/0:29,0:29:87.27:0,87,1083	0/0:25,0:25:69.22:0,69,868	0/0:6,0:6:18.04:0,18,212	0/0:30,0:30:81.26:0,81,1019	1/1:1,9:10:27.06:275,27,0	0/0:23,0:23:60.18:0,60,744	0/0:27,0:27:72.23:0,72,906	0/0:16,0:16:48.15:0,48,603	0/0:16,0:16:45.14:0,45,562	0/0:15,0:15:42.13:0,42,528	0/0:8,0:8:21.07:0,21,264	0/1:10,1:11:0.49:0,0,310	0/0:19,0:19:54.12:0,54,649	0/0:24,0:24:69.18:0,69,847	0/0:11,0:11:27.09:0,27,340	0/0:24,0:24:72.23:0,72,905	0/0:3,0:3:6.02:0,6,75	0/0:9,0:9:24.08:0,24,302	0/0:19,0:19:57.17:0,57,705	0/0:11,0:11:33.11:0,33,415	0/0:21,0:21:21.07:0,21,264	0/0:16,0:16:45.14:0,45,558	0/0:21,0:21:60.19:0,60,755	0/0:20,0:20:51.12:0,51,624
chr10	79274863	.	GAC	G	1328.34	PASS	AB=0.971;AC=7;AF=0.125;AN=56;BaseQRankSum=9.935;DP=629;FS=20.499;HRun=0;HaplotypeScore=94.4333;InbreedingCoeff=0.8112;MQ=66.58;MQ0=3;MQRankSum=-1.127;QD=12.53;ReadPosRankSum=2.937;VQSLOD=1.7559;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,17:29:39.07:465,39,0	0/0:9,0:9:24.08:0,24,393	0/0:27,0:23:2.29:0,2,330	0/1:31,1:21:1.99:2,0,214	0/0:29,0:29:81.26:0,81,1303	0/0:22,0:22:51.17:0,51,836	0/0:16,0:16:36.04:0,36,548	0/0:27,0:27:63.19:0,63,977	1/1:4,17:21:45.14:558,45,0	0/0:26,1:27:38.04:0,38,1100	0/0:20,0:20:48.16:0,48,786	0/0:23,0:23:39.11:0,39,602	0/0:21,0:21:51.16:0,51,804	0/0:16,0:16:45.15:0,45,738	0/0:18,0:18:51.17:0,51,833	0/0:28,0:28:72.25:0,72,1181	0/0:36,0:36:71.17:0,71,1166	0/0:19,0:19:48.16:0,48,780	0/0:19,0:19:45.14:0,45,714	0/0:18,0:18:45.14:0,45,692	0/0:20,1:21:20.01:0,20,823	0/0:17,1:18:13.98:0,14,746	0/0:17,1:18:7.99:0,8,645	0/0:23,0:23:50.68:0,51,801	1/1:10,13:23:36.11:446,36,0	0/0:34,0:34:84.29:0,84,1369	0/0:27,0:27:69.16:0,69,1021	0/0:7,0:7:21.07:0,21,344
chr10	79274951	.	TA	T	1160.14	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.904;DP=617;FS=4.127;HRun=9;HaplotypeScore=69.7157;InbreedingCoeff=0.9464;MQ=80.58;MQ0=0;MQRankSum=-2.115;QD=21.09;ReadPosRankSum=0.735;VQSLOD=4.4070;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:71.98:650,72,0	0/0:3,0:3:6.02:0,6,69	0/0:20,0:21:36.06:0,36,395	0/0:17,0:15:25.64:0,26,257	0/0:31,1:32:53.78:0,54,873	0/0:26,0:26:72.20:0,72,822	0/0:17,0:18:45.13:0,45,512	0/0:22,0:22:51.14:0,51,579	0/0:21,0:21:48.13:0,48,544	0/0:27,0:29:78.05:0,78,863	0/0:23,0:23:37.27:0,37,667	0/0:24,0:24:69.21:0,69,796	0/0:23,0:23:69.19:0,69,782	0/0:20,0:20:60.16:0,60,674	0/0:23,0:23:60.17:0,60,683	0/0:26,0:26:72.03:0,72,774	0/0:21,0:21:54.14:0,54,612	0/0:20,1:21:32.91:0,33,631	0/0:20,1:21:23.66:0,24,509	0/0:25,0:27:81.05:0,81,883	0/0:15,0:15:39.12:0,39,450	0/0:15,0:15:42.10:0,42,465	0/0:21,0:21:63.15:0,63,691	0/0:24,1:25:38.75:0,39,691	1/1:3,24:27:69.02:631,69,0	0/0:24,0:24:60.18:0,60,693	0/0:27,0:27:81.19:0,81,896	0/0:17,0:17:51.15:0,51,586
chr10	79275959	.	GT	G	1143.38	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.970;DP=398;FS=15.152;HRun=7;HaplotypeScore=39.2806;InbreedingCoeff=0.9060;MQ=73.17;MQ0=0;MQRankSum=0.922;QD=23.33;ReadPosRankSum=0.960;VQSLOD=1.9533;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:42.09:428,42,0	0/0:11,0:11:21.07:0,21,264	0/0:6,0:6:8.96:0,9,93	0/0:7,0:7:1.99:0,2,45	0/0:22,0:22:63.20:0,63,792	0/0:17,0:17:48.15:0,48,603	0/0:10,0:10:27.08:0,27,328	0/0:20,0:20:51.12:0,51,584	1/1:2,11:13:33.07:337,33,0	0/0:14,0:14:27.08:0,27,329	0/0:14,0:14:39.06:0,39,457	0/0:7,0:7:21.07:0,21,264	0/0:15,0:15:45.14:0,45,564	0/0:14,0:14:30.08:0,30,364	0/0:12,0:12:30.10:0,30,377	0/0:11,0:11:33.11:0,33,415	0/0:21,0:21:60.19:0,60,755	0/0:16,0:16:45.14:0,45,564	0/0:22,0:22:63.20:0,63,789	0/0:22,0:22:51.15:0,51,629	0/0:11,0:11:27.09:0,27,340	0/0:14,0:14:33.09:0,33,402	0/0:10,0:10:30.09:0,30,370	0/0:6,0:6:18.06:0,18,226	1/1:2,19:21:51.12:520,51,0	0/0:15,0:15:36.12:0,36,453	0/0:22,0:22:66.21:0,66,830	0/0:10,0:10:30.07:0,30,351
chr10	79276785	.	A	AT	1096.24	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.243;DP=726;FS=1.297;HRun=9;HaplotypeScore=70.2940;InbreedingCoeff=0.9975;MQ=75.38;MQ0=2;MQRankSum=-1.544;QD=16.12;ReadPosRankSum=0.750;VQSLOD=3.8666;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,911	0/0:9,0:9:23.99:0,24,206	0/0:16,0:17:34.86:0,35,273	0/0:15,0:15:41.92:0,42,353	0/0:39,0:39:99:0,106,913	0/0:21,0:21:56.94:0,57,489	0/0:30,0:30:80.93:0,81,691	0/0:38,0:38:88.92:0,89,745	0/0:30,0:30:80.96:0,81,699	0/0:33,0:33:65.50:0,66,708	0/0:22,0:22:59.96:0,60,517	1/1:2,16:18:33.09:365,33,0	1/1:9,16:26:38.90:411,39,0	1/1:8,16:24:42.11:463,42,0	0/0:45,0:45:99:0,126,1090	0/0:31,0:31:80.93:0,81,695	0/0:22,0:23:62.01:0,62,524	0/0:16,0:14:41.93:0,42,357	0/0:20,0:22:46.03:0,46,373	0/0:34,0:34:86.96:0,87,755	0/0:37,0:37:99:0,105,896	0/0:24,0:24:65.97:0,66,569	0/0:20,0:21:56.02:0,56,475	0/0:27,0:27:77.98:0,78,677	0/0:21,0:21:47.97:0,48,416	0/0:30,0:30:77.97:0,78,677	0/0:27,0:27:77:0,77,654	0/0:7,0:7:20.88:0,21,167
chr10	79276946	.	T	TTCACTAC	10665.96	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-7.711;DP=740;FS=7.526;HRun=0;HaplotypeScore=166.4678;InbreedingCoeff=0.9995;MQ=84.71;MQ0=0;MQRankSum=-15.327;QD=97.85;ReadPosRankSum=1.618;VQSLOD=6.2177;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,3011	0/0:10,0:10:27.06:0,27,595	0/0:24,0:24:60.21:0,60,1461	0/0:25,0:25:56.94:0,57,1209	0/0:36,0:36:99:0,102,2546	0/0:27,0:27:81.26:0,81,2041	0/0:22,0:22:57.20:0,57,1478	0/0:26,0:26:75.26:0,75,1938	1/1:8,17:26:66.23:2584,66,0	0/0:42,0:42:99:0,117,2910	0/0:29,0:29:81.28:0,81,2104	1/1:5,12:18:45.15:1766,45,0	1/1:7,23:33:75.26:2914,75,0	1/1:5,26:32:87.30:3402,87,0	0/0:26,0:26:78.24:0,78,1884	0/0:31,0:31:93.31:0,93,2335	0/0:22,0:22:66.21:0,66,1636	0/0:11,0:11:33.11:0,33,820	0/0:17,0:17:48.16:0,48,1237	0/0:39,0:39:99:0,111,2782	0/0:18,0:18:54.15:0,54,1227	0/0:28,0:28:72.22:0,72,1740	0/0:20,0:20:54.16:0,54,1291	0/0:26,0:26:72.25:0,72,1803	0/0:26,0:26:75.26:0,75,1830	0/0:41,0:41:99:0,117,2998	0/0:33,0:33:90.27:0,90,2202	0/0:10,0:10:30.10:0,30,779
chr10	79277115	.	A	AG	1135.07	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.651;DP=725;FS=0.000;HRun=0;HaplotypeScore=81.2138;InbreedingCoeff=0.9965;MQ=85.77;MQ0=1;MQRankSum=-0.996;QD=40.54;ReadPosRankSum=1.487;VQSLOD=4.1552;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,1740	0/0:9,0:9:27.09:0,27,378	0/0:24,0:24:69.23:0,69,955	0/0:24,0:24:58.50:0,58,818	0/0:34,0:34:99:0,102,1392	0/0:25,0:25:72.21:0,72,956	0/0:24,0:24:69.22:0,69,949	0/0:31,0:31:84.24:0,84,1153	1/1:0,27:28:78.26:1230,78,0	0/0:23,0:23:69.23:0,69,964	0/0:18,0:18:54.18:0,54,755	0/0:22,0:22:66.15:0,66,878	0/0:31,0:31:93.29:0,93,1282	0/0:27,0:27:81.27:0,81,1132	0/0:34,0:34:96.32:0,96,1343	0/0:32,0:32:96.32:0,96,1341	0/0:39,0:39:99:0,117,1634	0/0:10,0:10:30.10:0,30,420	0/0:27,0:27:78.23:0,78,1057	0/0:24,0:24:72.22:0,72,975	0/0:39,0:38:99:0,114,1520	0/0:26,0:26:75.23:0,75,1031	0/0:18,0:18:54.18:0,54,755	0/0:22,0:22:63.20:0,63,865	0/0:19,0:19:57.19:0,57,797	0/0:35,0:35:99:0,105,1423	0/0:28,0:27:84.27:0,84,1152	0/0:8,0:8:24.08:0,24,335
chr10	79278405	.	A	AT	2407.32	PASS	AB=0.900;AC=11;AF=0.196;AN=56;BaseQRankSum=-9.793;DP=573;FS=10.033;HRun=6;HaplotypeScore=54.0728;InbreedingCoeff=0.9259;MQ=85.67;MQ0=0;MQRankSum=-3.565;QD=23.60;ReadPosRankSum=1.902;VQSLOD=2.5499;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:45.14:561,45,0	0/0:7,0:7:21.05:0,21,214	0/0:18,1:18:31.71:0,32,336	0/0:20,0:20:16.42:0,16,289	0/0:33,0:33:93.19:0,93,941	0/0:30,0:30:87.16:0,87,872	0/0:21,0:21:60.09:0,60,590	0/0:28,0:28:75.05:0,75,731	0/1:16,2:18:1.67:2,0,293	0/0:23,0:23:69.13:0,69,687	0/0:24,0:23:60.13:0,60,612	1/1:1,14:15:39.12:490,39,0	1/1:1,12:13:33.11:415,33,0	1/1:2,13:15:33.06:397,33,0	0/0:21,0:21:54.11:0,54,545	0/0:25,0:25:72.13:0,72,721	0/0:11,0:11:30:0,30,283	0/0:9,0:9:21.03:0,21,207	0/0:23,0:23:69.08:0,69,663	0/0:34,0:34:99:0,99,990	0/0:15,0:15:45.05:0,45,435	0/0:20,0:20:57.11:0,57,572	0/0:31,0:31:84.18:0,84,856	0/0:10,0:10:27.04:0,27,263	1/1:1,20:21:57.18:717,57,0	0/0:15,0:15:39.07:0,39,392	0/0:34,0:34:84.15:0,84,840	0/0:18,0:18:36.07:0,36,367
chr10	79278668	.	A	AT	2163.52	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.953;DP=547;FS=1.746;HRun=2;HaplotypeScore=59.0444;InbreedingCoeff=0.9397;MQ=72.08;MQ0=0;MQRankSum=-1.592;QD=33.80;ReadPosRankSum=0.174;VQSLOD=3.6069;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.25:0,81,1004	0/0:10,0:10:27.08:0,27,335	0/0:6,0:6:7.37:0,7,91	0/0:9,0:9:6.61:0,7,62	0/0:24,0:24:66.16:0,66,778	0/0:35,0:35:93.29:0,93,1153	0/0:18,0:18:51.16:0,51,632	0/0:25,0:25:72.23:0,72,893	0/0:11,0:11:30.09:0,30,372	0/0:26,0:26:75.21:0,75,898	0/0:19,0:19:57.18:0,57,707	1/1:1,20:21:51.17:731,51,0	1/1:1,23:24:63.17:884,63,0	1/1:2,17:19:48.16:691,48,0	0/0:22,0:22:66.21:0,66,817	0/0:16,0:16:48.15:0,48,595	0/0:16,0:16:48.15:0,48,595	0/0:10,0:10:30.09:0,30,372	0/0:24,0:24:66.18:0,66,784	0/0:31,0:31:93.28:0,93,1141	0/0:18,0:18:48.12:0,48,580	0/0:18,0:18:48.12:0,48,569	0/0:18,0:18:54.17:0,54,670	0/0:15,0:15:42.13:0,42,521	0/0:28,0:28:84.24:0,84,1017	0/0:21,0:21:63.19:0,63,770	0/0:21,0:21:54.17:0,54,670	0/0:12,0:12:30.08:0,30,359
chr10	79279287	.	AGGGTT	A	707.67	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.440;DP=785;FS=5.891;HRun=0;HaplotypeScore=139.9703;InbreedingCoeff=0.9369;MQ=72.70;MQ0=0;MQRankSum=0.709;QD=39.31;ReadPosRankSum=2.268;VQSLOD=3.3556;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,3939	0/0:10,0:10:30.09:0,30,847	0/0:21,0:21:60.68:0,61,1907	0/0:20,0:20:56.56:0,57,1639	0/0:27,0:27:81.28:0,81,2593	0/0:26,0:26:78.26:0,78,2348	0/0:29,0:29:81.26:0,81,2505	0/0:19,0:19:54.18:0,54,1634	1/1:3,15:18:36.12:802,36,0	0/0:23,0:23:69.23:0,69,2156	0/0:25,0:25:75.26:0,75,2402	0/0:30,0:30:90.31:0,90,2853	0/0:33,0:33:99:0,99,3095	0/0:33,0:33:99:0,99,3065	0/0:43,0:43:99:0,129,3942	0/0:24,1:25:8.34:0,8,2187	0/0:31,0:31:93.32:0,93,2846	0/0:27,0:27:81.28:0,81,2491	0/0:21,0:21:60.21:0,60,1852	0/0:32,0:32:93.32:0,93,2983	0/0:42,0:42:99:0,123,3841	0/0:31,0:31:93.32:0,93,2981	0/0:32,0:32:96.33:0,96,2967	0/0:34,0:34:99:0,99,3083	0/0:31,0:31:93.32:0,93,2950	0/0:22,0:22:63.22:0,63,1963	0/0:40,0:40:99:0,114,3673	0/0:18,0:18:54.19:0,54,1745
chr10	79279398	.	G	GCA	1491.67	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.589;DP=725;FS=3.568;HRun=0;HaplotypeScore=124.4369;InbreedingCoeff=0.9978;MQ=61.31;MQ0=3;MQRankSum=-4.808;QD=20.16;ReadPosRankSum=-3.780;VQSLOD=3.2606;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:63.20:0,63,824	0/0:14,0:14:42.12:0,42,523	0/0:21,0:11:20.94:0,21,210	0/0:24,0:15:26.85:0,27,319	0/0:28,0:28:81.21:0,81,1042	0/0:21,0:21:51.13:0,51,623	0/0:25,0:25:68.42:0,68,855	0/0:36,0:36:78.11:0,78,914	0/0:27,0:27:72.21:0,72,904	0/0:31,0:31:89.30:0,89,1013	0/0:18,0:18:42.10:0,42,532	1/1:16,12:27:53.51:738,54,0	1/1:16,6:22:38.44:418,38,0	1/1:14,9:23:33.26:479,33,0	0/0:33,0:33:90.24:0,90,1147	0/0:17,0:17:39.06:0,39,463	0/0:49,0:49:99:0,144,1831	0/0:23,0:23:38.37:0,38,657	0/0:15,0:15:42.08:0,42,517	0/0:37,0:37:99:0,99,1250	0/0:57,0:57:99:0,147,1852	0/0:14,0:14:39.12:0,39,497	0/0:18,0:18:39.12:0,39,499	0/0:31,0:31:68.27:0,68,940	0/0:24,0:24:60.18:0,60,787	0/0:18,0:18:51.16:0,51,655	0/0:30,0:30:83.76:0,84,1063	0/0:14,0:14:36.09:0,36,455
chr10	79279429	.	ACT	A	83.95	PASS	AB=0.918;AC=14;AF=0.250;AN=56;BaseQRankSum=7.928;DP=744;FS=0.637;HRun=0;HaplotypeScore=115.0978;InbreedingCoeff=0.1774;MQ=58.10;MQ0=6;MQRankSum=-0.200;QD=0.30;ReadPosRankSum=3.678;VQSLOD=2.0761;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,2:35:56.19:0,56,1294	0/0:13,0:14:15.78:0,16,326	0/0:37,0:12:18.05:0,18,260	0/0:30,0:19:30.34:0,30,344	0/1:27,3:30:56.96:57,0,534	0/0:11,0:11:21.05:0,21,303	0/0:26,0:26:46.50:0,47,835	0/0:33,0:33:32.54:0,33,650	0/0:29,0:29:60.03:0,60,837	0/0:32,0:32:63.14:0,63,898	0/0:18,1:19:14.16:0,14,622	1/1:24,0:23:1.80:15,2,0	1/1:14,0:18:10.08:57,10,0	1/1:17,0:19:2.37:8,2,0	0/1:30,2:33:9.75:10,0,946	0/0:17,0:17:48.13:0,48,711	0/0:47,3:50:9.54:0,10,1555	0/0:24,0:24:60.04:0,60,810	0/0:18,0:18:23.35:0,23,368	0/0:31,0:31:34.61:0,35,1047	0/1:43,2:46:0.93:1,0,1073	0/1:14,1:15:0.86:1,0,424	0/1:15,3:18:34.67:35,0,448	0/0:37,0:37:67:0,67,1258	0/1:24,3:27:7.62:8,0,842	0/1:19,2:21:28.21:28,0,527	0/1:32,1:33:6.16:6,0,998	0/0:16,0:15:24.04:0,24,312
chr10	79280731	.	G	GTT	2077.45	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-5.754;DP=639;FS=1.744;HRun=9;HaplotypeScore=78.6335;InbreedingCoeff=0.9911;MQ=76.94;MQ0=0;MQRankSum=-0.552;QD=26.30;ReadPosRankSum=1.341;VQSLOD=3.6560;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.16:0,78,821	0/0:13,0:13:30.06:0,30,319	0/0:25,0:24:19.98:0,20,369	0/0:21,0:20:48.01:0,48,484	0/0:33,0:33:84.16:0,84,886	0/0:21,0:21:57.12:0,57,606	0/0:16,0:16:39.09:0,39,415	0/0:33,0:33:78.09:0,78,817	0/0:9,0:9:27.07:0,27,287	0/0:28,0:28:69.13:0,69,734	0/0:14,0:14:33.07:0,33,351	1/1:9,17:27:44.59:629,45,0	1/1:9,24:33:86.48:1256,86,0	1/1:8,11:19:24.68:335,25,0	0/0:26,0:26:69.16:0,69,734	0/0:31,0:31:72.12:0,72,758	0/0:20,0:20:54.13:0,54,574	0/0:17,0:17:44.28:0,44,435	0/0:19,0:19:42.08:0,42,447	0/0:29,0:29:81.16:0,81,839	0/0:27,0:27:66.10:0,66,687	0/0:14,0:14:33.08:0,33,351	0/0:22,0:22:60.10:0,60,630	0/0:22,0:22:66.17:0,66,703	0/0:24,0:24:63.12:0,63,662	0/0:25,0:25:68.57:0,69,701	0/0:31,0:30:88.98:0,89,916	0/0:10,0:10:15.01:0,15,160
chr10	79281461	.	CT	C	1653.11	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.913;DP=598;FS=2.938;HRun=8;HaplotypeScore=73.6853;InbreedingCoeff=0.9994;MQ=85.15;MQ0=0;MQRankSum=-5.184;QD=22.96;ReadPosRankSum=1.286;VQSLOD=4.3732;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:57.09:550,57,0	0/0:11,0:11:33.10:0,33,399	0/0:21,0:21:54.16:0,54,635	0/0:22,0:22:41.46:0,41,521	0/0:28,0:28:84.22:0,84,999	0/0:18,0:18:54.17:0,54,652	0/0:18,0:18:48.15:0,48,580	0/0:38,0:38:99:0,108,1265	1/1:3,22:25:60.09:579,60,0	0/0:34,0:34:93.29:0,93,1123	0/0:16,0:16:42.13:0,42,507	0/0:19,0:19:48.12:0,48,569	0/0:23,0:23:66.19:0,66,786	0/0:19,0:19:57.17:0,57,688	0/0:22,0:22:63.19:0,63,761	0/0:25,1:26:40.23:0,40,768	0/0:14,0:14:42.13:0,42,507	0/0:11,0:11:30.09:0,30,362	0/0:14,0:14:33.06:0,33,373	0/0:27,0:27:78.23:0,78,932	0/0:15,0:15:39.12:0,39,471	0/0:26,0:26:75.23:0,75,900	0/0:19,0:19:54.16:0,54,637	0/0:14,0:14:30.09:0,30,362	1/1:0,25:25:69.11:666,69,0	0/0:27,0:27:78.21:0,78,919	0/0:26,1:28:52.14:0,52,891	0/0:15,0:15:45.09:0,45,515
chr10	79283175	.	A	AT	2821.21	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-10.616;DP=669;FS=7.236;HRun=6;HaplotypeScore=59.1132;InbreedingCoeff=0.9973;MQ=79.71;MQ0=0;MQRankSum=-1.339;QD=30.67;ReadPosRankSum=3.358;VQSLOD=4.2156;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1102	0/0:8,0:8:18.04:0,18,183	0/0:21,0:20:48.33:0,48,535	0/0:22,0:22:54.10:0,54,535	0/0:29,0:29:84.19:0,84,857	0/0:33,0:33:87.19:0,87,887	0/0:21,0:21:57.11:0,57,573	0/0:38,0:38:93.21:0,93,949	0/0:27,0:27:78.16:0,78,789	0/0:24,0:24:69.15:0,69,699	0/0:19,0:19:51.12:0,51,520	1/1:1,26:27:66.21:830,66,0	1/1:1,25:26:66.21:830,66,0	1/1:0,13:13:33.11:415,33,0	0/0:37,0:37:99:0,105,1063	0/0:28,0:28:81.18:0,81,826	0/0:22,0:22:66.13:0,66,665	0/0:26,1:27:34.39:0,34,656	0/0:22,0:22:63.13:0,63,631	0/0:24,0:24:72.16:0,72,734	0/0:23,0:23:66.12:0,66,663	0/0:16,0:16:45.10:0,45,459	0/0:20,0:20:57.10:0,57,567	0/0:14,0:14:39.05:0,39,387	1/1:1,25:26:72.23:906,72,0	0/0:22,0:22:60.12:0,60,607	0/0:33,0:33:90.19:0,90,911	0/0:9,0:9:27.06:0,27,275
chr10	79283863	.	CTATTTATT	C	3749.25	PASS	AC=26;AF=0.542;AN=48;BaseQRankSum=5.245;DP=314;FS=3.812;HRun=0;HaplotypeScore=91.5696;InbreedingCoeff=0.7065;MQ=65.05;MQ0=1;MQRankSum=-6.464;QD=20.71;ReadPosRankSum=-1.109;VQSLOD=2.6155;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:13:21.07:0,21,714	1/1:2,1:3:3.01:75,3,0	./.	0/0:8,0:4:2.60:0,3,10	1/1:7,10:17:21.07:519,21,0	0/0:15,0:15:15.05:0,15,616	0/0:4,0:4:3.01:0,3,104	1/1:26,4:30:12.01:172,12,0	0/0:5,0:5:6.02:0,6,246	./.	1/1:10,9:19:27.09:669,27,0	1/1:1,0:6:12.04:224,12,0	1/1:11,0:21:27.09:503,27,0	1/1:6,0:8:6.02:112,6,0	1/1:5,1:7:6.02:131,6,0	1/1:5,3:8:9.03:226,9,0	0/0:27,0:27:39.13:0,39,1518	0/0:10,0:15:15.05:0,15,498	1/1:7,3:10:9.03:214,9,0	1/1:9,1:10:3.01:75,3,0	./.	0/0:3,0:3:3.01:0,3,64	0/0:8,0:8:6.02:0,6,184	0/0:4,0:4:6.02:0,6,247	1/1:15,0:30:30.10:553,30,0	1/1:8,4:12:12.04:274,12,0	./.	0/0:6,0:7:2.99:0,3,24
chr10	79284642	.	T	TG	2087.95	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-11.780;DP=689;FS=7.883;HRun=5;HaplotypeScore=76.1624;InbreedingCoeff=0.9979;MQ=86.83;MQ0=0;MQRankSum=-4.135;QD=29.41;ReadPosRankSum=4.394;VQSLOD=4.0084;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,39:43:99:1421,108,0	0/0:8,0:8:21.05:0,21,225	0/0:23,0:23:52.91:0,53,533	0/0:26,0:27:60.21:0,60,582	0/0:19,0:19:48.08:0,48,493	0/0:18,0:18:47.87:0,48,484	0/0:30,0:30:81.05:0,81,795	0/0:37,0:37:96.20:0,96,1002	1/1:3,25:28:60.20:789,60,0	0/0:17,0:17:51.11:0,51,532	0/0:23,0:23:66.15:0,66,702	0/0:22,0:22:66.15:0,66,700	0/0:18,0:18:50.96:0,51,529	0/0:25,0:25:71.82:0,72,728	0/0:20,0:20:57.14:0,57,612	0/0:25,0:25:66.14:0,66,693	0/0:25,0:25:75.19:0,75,806	0/0:24,0:24:66.13:0,66,691	0/0:23,0:23:63.14:0,63,664	0/0:33,0:33:92.23:0,92,952	0/0:47,0:47:99:0,129,1378	0/0:23,0:23:47.12:0,47,536	0/0:25,0:25:57.13:0,57,606	0/0:20,0:20:54.08:0,54,549	0/0:24,0:24:66.14:0,66,708	0/0:25,0:25:69.15:0,69,724	0/0:22,0:22:66.13:0,66,687	0/0:15,0:15:42.11:0,42,451
chr10	79286581	.	C	CGT	5947.94	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-10.156;DP=765;FS=0.000;HRun=0;HaplotypeScore=85.1790;InbreedingCoeff=0.9518;MQ=82.25;MQ0=0;MQRankSum=-2.909;QD=49.57;ReadPosRankSum=4.051;VQSLOD=5.9496;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,1600	0/0:7,0:7:21.07:0,21,309	0/0:18,0:18:51:0,51,687	0/0:23,0:23:57.06:0,57,795	0/0:39,0:38:99:0,114,1621	0/0:33,0:33:96.32:0,96,1408	0/0:28,0:28:84.24:0,84,1168	0/0:25,0:25:72.23:0,72,1034	0/0:30,0:30:90.27:0,90,1285	0/0:21,0:21:60.20:0,60,883	0/0:23,0:23:69.23:0,69,1007	1/1:1,34:35:96.33:1797,96,0	1/1:0,24:26:69.24:1287,69,0	1/1:1,28:29:75.26:1404,75,0	0/0:38,0:38:99:0,105,1520	0/0:34,0:34:99:0,102,1481	0/0:22,0:22:63.21:0,63,926	0/0:10,0:10:30.01:0,30,373	0/0:16,0:16:45.15:0,45,662	0/0:42,0:42:99:0,117,1648	0/0:37,0:37:99:0,108,1568	0/0:38,0:38:99:0,111,1541	0/0:22,0:22:63.21:0,63,927	0/0:26,0:26:78.26:0,78,1142	1/1:1,29:30:78.27:1460,78,0	0/0:34,0:34:99:0,99,1433	0/0:37,0:37:99:0,111,1631	0/0:1,0:1:3.01:0,3,44
chr10	79287433	.	T	TA	3734.40	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=8.195;DP=558;FS=0.000;HRun=8;HaplotypeScore=59.4496;InbreedingCoeff=0.8868;MQ=76.50;MQ0=0;MQRankSum=-2.291;QD=24.90;ReadPosRankSum=1.309;VQSLOD=4.2965;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:30:72.17:816,72,0	0/0:5,0:5:12.01:0,12,110	0/1:15,0:15:9.89:10,0,209	0/0:15,0:15:9.03:0,9,213	0/0:26,0:26:72.04:0,72,659	0/0:23,0:23:66.04:0,66,604	0/0:21,0:21:57.02:0,57,522	0/0:29,0:29:72:0,72,650	1/1:3,15:18:39.12:450,39,0	0/0:26,0:26:69.03:0,69,631	0/0:21,0:21:57.02:0,57,518	1/1:2,16:18:36.11:416,36,0	1/1:1,20:21:60.18:692,60,0	1/1:3,24:27:63.19:727,63,0	0/0:15,0:15:41.99:0,42,374	0/0:20,0:20:60.02:0,60,544	0/0:23,0:23:63.03:0,63,576	0/0:18,0:18:48.02:0,48,439	0/0:16,0:16:42:0,42,379	0/0:23,0:23:51.01:0,51,463	0/0:11,0:11:29.99:0,30,269	0/0:21,0:21:60.03:0,60,549	0/0:24,0:24:69.01:0,69,622	0/0:21,0:21:50.95:0,51,453	1/1:3,18:21:54.16:623,54,0	0/0:27,0:27:66.03:0,66,604	0/0:19,0:19:51.03:0,51,467	0/0:4,0:4:12.01:0,12,110
chr10	79288525	.	C	CA	7586.82	PASS	AB=0.875;AC=41;AF=0.732;AN=56;BaseQRankSum=11.207;DP=595;FS=7.442;HRun=10;HaplotypeScore=164.1695;InbreedingCoeff=0.8443;MQ=69.25;MQ0=4;MQRankSum=-6.966;QD=16.79;ReadPosRankSum=-2.873;VQSLOD=3.0366;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,11:21:22.90:354,23,0	1/1:5,4:9:4.07:140,4,0	0/0:27,0:20:18.56:0,19,121	0/0:22,0:16:6.03:0,6,133	1/1:16,20:36:39.09:694,39,0	0/0:21,0:21:62.88:0,63,510	0/1:6,1:7:11:11,0,127	1/1:16,15:31:51.69:595,52,0	1/1:14,6:20:30.68:270,31,0	1/1:6,20:26:68.96:695,69,0	1/1:14,13:26:54.87:545,55,0	1/1:9,0:12:16.65:112,17,0	1/1:14,0:26:58.80:309,59,0	1/1:16,0:29:73.26:389,73,0	1/1:15,6:21:35.39:374,35,0	1/1:13,11:22:53.95:510,54,0	0/0:24,0:24:56.88:0,57,464	1/1:11,5:16:10.71:242,11,0	1/1:15,4:19:9.06:205,9,0	1/1:16,12:31:77.33:669,77,0	1/1:10,5:15:11.24:191,11,0	0/0:19,0:20:37.04:0,37,298	0/0:17,0:17:41.85:0,42,335	0/0:11,0:12:25.97:0,26,203	1/1:12,2:17:35.14:222,35,0	1/1:23,8:30:38.96:393,39,0	1/1:15,11:27:51.13:557,51,0	1/1:4,1:5:14.81:109,15,0
chr10	79288542	.	C	CA	241.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.567;DP=600;FS=11.857;HRun=4;HaplotypeScore=165.2671;InbreedingCoeff=0.8285;MQ=57.01;MQ0=7;MQRankSum=-4.061;QD=13.39;ReadPosRankSum=0.807;VQSLOD=1.7435;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:40.41:0,40,396	0/0:8,0:8:22.59:0,23,233	0/0:26,0:14:24.71:0,25,241	0/0:19,0:13:17.44:0,17,330	0/0:33,0:33:76.04:0,76,875	0/0:22,0:21:57.18:0,57,707	0/0:13,0:13:30.09:0,30,371	0/0:32,0:32:86.10:0,86,972	0/0:21,0:21:33.67:0,34,329	0/0:29,0:28:59.50:0,59,773	0/0:27,0:26:63.55:0,64,746	0/0:9,0:9:4.01:0,4,187	0/0:28,0:28:66.07:0,66,797	0/0:32,0:32:79.41:0,79,936	0/0:24,0:24:72.18:0,72,855	0/0:26,0:24:68.54:0,69,774	0/0:22,0:22:66.21:0,66,813	0/0:20,0:20:47.10:0,47,614	0/0:19,0:18:47.42:0,47,501	0/0:25,1:26:61.50:0,62,696	0/0:9,0:9:27.08:0,27,330	0/0:16,0:16:43.02:0,43,523	0/0:15,0:15:42.10:0,42,501	0/0:14,0:14:42.08:0,42,490	1/1:7,11:17:27.61:335,28,0	0/0:34,0:33:63.18:0,63,1011	0/0:30,0:30:71.23:0,71,814	0/0:4,0:4:10.84:0,11,114
chr10	79288548	.	C	CA	7949.62	PASS	AB=0.898;AC=39;AF=0.696;AN=56;BaseQRankSum=6.548;DP=619;FS=0.388;HRun=10;HaplotypeScore=135.6957;InbreedingCoeff=0.7544;MQ=56.85;MQ0=7;MQRankSum=-6.920;QD=16.39;ReadPosRankSum=-3.606;VQSLOD=3.0078;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:22:31.47:169,31,0	1/1:1,8:9:25.52:234,26,0	0/0:24,0:13:6.35:0,6,162	0/0:18,0:13:18.51:0,19,168	1/1:12,19:31:35.39:527,35,0	0/0:24,0:23:50.91:0,51,419	0/0:14,0:14:25.73:0,26,240	1/1:11,27:38:60.83:670,61,0	1/1:5,0:21:22.95:106,23,0	1/1:16,15:30:23.35:428,23,0	1/1:12,15:26:41.07:592,41,0	1/1:11,0:12:24.56:180,25,0	1/1:25,0:25:62.42:459,62,0	1/1:31,1:32:85.40:641,85,0	1/1:6,17:24:33.32:529,33,0	1/1:4,21:23:27.13:622,27,0	0/0:23,0:23:51.31:0,51,439	1/1:7,12:22:43.86:398,44,0	1/1:8,9:16:32.98:354,33,0	1/1:17,15:32:14.99:526,15,0	0/1:6,2:8:24.61:89,0,25	0/0:16,0:16:39.40:0,39,317	0/1:15,2:17:30.58:31,0,185	0/0:14,0:14:41.94:0,42,342	0/1:18,0:17:1.49:20,0,1	1/1:9,22:33:29.06:658,29,0	1/1:11,16:28:35.33:535,35,0	1/1:2,7:10:16.76:183,17,0
chr10	79288550	.	A	AC	2754.94	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=4.533;DP=619;FS=15.706;HRun=0;HaplotypeScore=148.9237;InbreedingCoeff=-0.0031;MQ=57.04;MQ0=7;MQRankSum=-4.607;QD=6.92;ReadPosRankSum=6.286;VQSLOD=2.5198;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:38.24:0,38,187	0/1:9,0:9:2.32:26,0,2	0/0:24,0:13:28.65:0,29,324	0/0:18,0:13:38.53:0,39,424	0/1:30,0:30:69.22:69,0,164	0/0:23,0:22:60.17:0,60,788	0/0:14,0:14:41.94:0,42,506	0/1:40,0:40:49.49:49,0,238	0/0:20,0:20:27.26:0,27,154	0/1:29,0:28:28.75:29,0,273	0/1:28,0:27:64.61:65,0,97	1/1:2,10:12:21.17:299,21,0	1/1:2,22:24:57.11:859,57,0	1/1:4,27:32:90.78:1114,91,0	0/1:24,0:24:66.29:66,0,98	0/1:24,0:23:27.69:113,0,28	0/0:26,0:26:74.62:0,75,904	0/1:22,0:22:35.30:35,0,117	0/1:18,0:17:26.92:27,0,76	0/1:32,0:31:61.45:61,0,228	0/0:7,0:7:2.29:0,2,97	0/0:16,0:16:44.97:0,45,583	0/0:17,0:17:33.45:0,33,469	0/0:14,0:14:42.14:0,42,582	0/0:19,0:18:37.15:0,37,251	0/1:35,0:33:44.44:44,0,180	0/1:28,0:28:69.02:69,0,136	0/1:11,0:11:4.35:4,0,50
chr10	79289737	.	T	TCTC	1944.93	PASS	AB=0.904;AC=34;AF=0.630;AN=54;BaseQRankSum=2.216;DP=184;FS=17.982;HRun=0;HaplotypeScore=36.3589;InbreedingCoeff=0.3970;MQ=51.24;MQ0=6;MQRankSum=-3.837;QD=17.52;ReadPosRankSum=-0.662;VQSLOD=1.3441;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:8:17.99:0,18,224	1/1:3,1:4:11.02:119,11,0	0/0:6,0:2:2.94:0,3,45	0/0:16,0:4:2.28:0,2,44	1/1:5,2:7:9.03:158,9,0	0/1:7,0:6:8.38:8,0,112	0/0:5,0:5:6.48:0,6,82	1/1:2,0:2:6.01:83,6,0	0/0:4,0:4:3.44:0,3,65	1/1:4,1:5:1.98:172,2,0	1/1:3,0:2:3.01:50,3,0	1/1:0,4:4:2.99:24,3,0	1/1:1,2:4:3.01:38,3,0	1/1:0,3:3:3.01:54,3,0	1/1:5,2:7:8.50:176,9,0	0/1:3,2:5:32.17:133,0,32	0/0:12,0:11:15.46:0,15,295	1/1:1,5:6:6.02:121,6,0	1/1:10,2:10:16.24:262,16,0	1/1:9,0:6:11.95:116,12,0	0/1:8,1:8:7.63:33,0,8	0/0:12,0:11:18.49:0,18,367	0/1:6,0:5:6:6,0,28	0/0:8,0:8:18.06:0,18,254	1/1:4,0:4:5.79:63,6,0	1/1:5,6:11:25.64:464,26,0	1/1:0,3:3:3.01:37,3,0	./.
chr10	79291049	.	T	TA	1065.97	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.097;DP=443;FS=2.357;HRun=6;HaplotypeScore=39.1377;InbreedingCoeff=0.9072;MQ=70.73;MQ0=0;MQRankSum=0.780;QD=27.33;ReadPosRankSum=2.255;VQSLOD=3.7843;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.18:0,84,850	0/0:13,0:13:39.09:0,39,397	0/0:6,0:6:11.70:0,12,103	0/0:6,0:6:11.99:0,12,109	0/0:27,0:27:69.12:0,69,691	0/0:25,0:25:69.16:0,69,704	0/0:10,0:10:27.04:0,27,264	0/0:32,0:32:78.15:0,78,784	0/0:13,0:13:39.08:0,39,391	0/0:19,0:19:57.13:0,57,581	0/0:27,0:27:72.11:0,72,715	1/1:1,12:13:27.09:340,27,0	1/1:3,9:12:27.09:340,27,0	1/1:0,14:14:42.13:528,42,0	0/0:14,0:14:39.05:0,39,379	0/0:12,0:12:30.03:0,30,296	0/0:20,0:20:57.13:0,57,581	0/0:14,0:14:42.06:0,42,417	0/0:24,0:24:66.13:0,66,663	0/0:26,0:26:72.13:0,72,715	0/0:4,0:4:12.03:0,12,122	0/0:7,0:7:21.03:0,21,205	0/0:18,0:18:51.10:0,51,515	0/0:9,0:9:24.04:0,24,239	0/0:19,0:19:57.09:0,57,561	0/0:13,0:13:33.06:0,33,331	0/0:13,0:13:39.07:0,39,387	0/0:2,0:2:3.01:0,3,31
chr10	79291880	.	T	TA	1244.50	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-1.207;DP=528;FS=1.272;HRun=8;HaplotypeScore=52.2503;InbreedingCoeff=0.9206;MQ=61.53;MQ0=6;MQRankSum=0.514;QD=27.66;ReadPosRankSum=-1.297;VQSLOD=3.7679;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.02:0,48,436	0/0:15,0:15:44.95:0,45,402	0/0:8,0:7:21.01:0,21,190	0/0:6,0:6:11.99:0,12,110	0/0:31,0:31:87.04:0,87,796	0/0:27,0:26:72.04:0,72,659	0/0:6,0:6:14.91:0,15,122	0/0:34,0:33:92.99:0,93,838	0/0:13,0:13:33.01:0,33,302	0/0:24,0:24:63.03:0,63,577	0/0:37,0:37:98.96:0,99,893	1/1:5,18:23:66.15:744,66,0	1/1:3,9:13:33.01:342,33,0	1/1:1,8:9:27.07:302,27,0	0/0:27,0:27:78.03:0,78,709	0/0:16,0:16:45.02:0,45,411	0/0:21,0:20:48.02:0,48,439	0/0:9,0:8:14.95:0,15,129	0/0:25,0:25:63.02:0,63,578	0/0:30,0:30:81.04:0,81,741	0/0:6,0:4:9:0,9,82	0/0:13,0:13:39.02:0,39,356	0/0:22,0:22:57.02:0,57,521	0/0:8,0:7:21.01:0,21,192	0/0:34,0:34:81.02:0,81,741	0/0:22,0:21:57.01:0,57,517	0/0:31,0:30:84.04:0,84,768	0/0:2,0:2:6:0,6,55
chr10	79291968	.	AG	A	2006.34	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.985;DP=590;FS=0.000;HRun=1;HaplotypeScore=55.5597;InbreedingCoeff=0.9966;MQ=78.19;MQ0=0;MQRankSum=-0.901;QD=37.15;ReadPosRankSum=1.205;VQSLOD=3.7568;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.15:0,63,923	0/0:6,0:6:18.03:0,18,240	0/0:14,0:14:42.07:0,42,595	0/0:21,0:21:51.08:0,51,714	0/0:25,0:25:75.21:0,75,1166	0/0:33,0:33:99:0,99,1487	0/0:15,0:15:45.15:0,45,717	0/0:38,0:38:99:0,114,1759	0/0:13,0:13:39.13:0,39,623	0/0:24,0:24:72.23:0,72,1105	0/0:26,0:26:78.25:0,78,1219	1/1:1,19:20:60.19:822,60,0	1/1:1,19:20:60.19:824,60,0	1/1:0,14:14:36.12:503,36,0	0/0:21,0:21:63.20:0,63,983	0/0:27,0:27:81.28:0,81,1281	0/0:21,0:20:57.15:0,57,861	0/0:22,0:22:57.14:0,57,861	0/0:19,0:19:57.14:0,57,801	0/0:35,0:35:99:0,105,1602	0/0:12,0:12:36.12:0,36,563	0/0:18,0:18:51.15:0,51,769	0/0:23,0:23:69.22:0,69,1078	0/0:10,0:10:30.10:0,30,476	0/0:21,0:21:63.19:0,63,961	0/0:27,0:27:81.27:0,81,1273	0/0:33,0:32:99:0,99,1564	0/0:11,0:11:30.10:0,30,468
chr10	79293591	.	T	TATAATAATA	4357.03	PASS	AB=1.000;AC=33;AF=0.786;AN=42;BaseQRankSum=2.060;DP=186;FS=2.365;HRun=0;HaplotypeScore=57.2681;InbreedingCoeff=0.4199;MQ=74.52;MQ0=2;MQRankSum=-4.479;QD=34.86;ReadPosRankSum=-2.074;VQSLOD=3.6109;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:8:4.87:105,0,5	1/1:2,1:3:3.01:136,3,0	./.	./.	1/1:5,0:4:3.01:89,3,0	0/0:10,0:10:15.05:0,15,413	0/0:2,0:2:6:0,6,106	1/1:35,0:35:57.17:1570,57,0	1/1:1,0:1:3.01:99,3,0	1/1:4,2:6:9.03:379,9,0	1/1:3,0:4:3.01:117,3,0	1/1:4,0:4:6.02:213,6,0	./.	1/1:2,1:4:6.02:253,6,0	1/1:5,0:6:3.01:117,3,0	1/1:6,0:7:9.03:297,9,0	0/0:15,0:15:27.09:0,27,693	1/1:5,1:6:8.24:254,8,0	1/1:5,1:6:8.99:255,9,0	./.	./.	./.	./.	0/0:6,0:6:3.01:0,3,83	1/1:3,0:7:6.02:115,6,0	1/1:5,0:6:3.01:118,3,0	1/1:7,1:8:6.02:181,6,0	1/1:4,0:6:3.01:57,3,0
chr10	79293752	.	G	GA	1305.93	PASS	AB=0.957;AC=12;AF=0.214;AN=56;BaseQRankSum=-6.581;DP=307;FS=3.834;HRun=9;HaplotypeScore=30.9435;InbreedingCoeff=0.7422;MQ=75.31;MQ0=0;MQRankSum=-0.058;QD=15.73;ReadPosRankSum=1.058;VQSLOD=2.9128;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:28.09:538,28,0	0/0:2,0:2:3:0,3,26	0/0:6,0:6:14.97:0,15,126	0/1:9,0:9:3.35:3,0,84	0/0:5,0:5:14.97:0,15,125	0/0:27,1:28:47.81:0,48,644	0/0:5,0:5:14.98:0,15,127	0/0:22,0:23:41.01:0,41,345	1/1:0,6:6:15.04:166,15,0	0/0:6,0:6:12:0,12,104	0/0:3,0:3:9:0,9,78	1/1:3,3:6:12.03:132,12,0	1/1:3,6:9:21.06:232,21,0	1/1:0,13:13:36.10:398,36,0	0/0:11,0:11:29.96:0,30,253	0/0:11,0:11:26.98:0,27,234	0/0:20,0:20:56.98:0,57,495	0/0:8,0:8:14.97:0,15,151	0/1:19,2:21:9.38:9,0,386	0/0:11,0:11:29.99:0,30,260	0/0:8,0:8:20.99:0,21,182	0/0:4,0:4:8.98:0,9,74	0/0:6,0:6:18:0,18,156	0/0:6,0:6:18:0,18,156	0/0:9,0:9:20.96:0,21,177	0/0:12,0:12:29.99:0,30,260	0/0:20,0:19:53.96:0,54,465	0/0:20,0:20:56.99:0,57,495
chr10	79293966	.	T	TTGTG	5276.65	PASS	AB=0.889;AC=41;AF=0.759;AN=54;BaseQRankSum=-3.875;DP=555;FS=7.811;HRun=0;HaplotypeScore=103.4134;InbreedingCoeff=0.6417;MQ=58.62;MQ0=5;MQRankSum=-1.559;QD=12.42;ReadPosRankSum=-2.501;VQSLOD=3.3398;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,16:28:24.08:564,24,0	1/1:3,5:11:11.53:223,12,0	0/1:27,0:13:0:0,0,0	./.	1/1:11,12:24:11.42:211,11,0	0/0:20,0:24:35.21:0,35,614	0/1:19,0:19:41.57:42,0,311	1/1:34,0:33:15.03:194,15,0	1/1:9,13:23:20.81:440,21,0	1/1:10,4:19:21.95:319,22,0	1/1:15,1:17:2.90:71,3,0	1/1:8,0:12:3.01:52,3,0	1/1:15,0:14:9.03:153,9,0	1/1:22,0:28:7.88:110,8,0	1/1:4,14:18:12.04:285,12,0	0/1:9,7:18:4.16:343,0,4	0/0:19,0:19:39.13:0,39,614	1/1:5,2:8:8.77:155,9,0	1/1:16,4:20:8.98:160,9,0	1/1:4,5:9:12.04:285,12,0	1/1:9,14:23:17.80:368,18,0	0/0:21,0:22:32.48:0,32,539	0/0:16,0:16:33.09:0,33,497	0/0:14,0:16:31.32:0,31,479	1/1:10,10:22:14.92:302,15,0	1/1:15,7:22:18.25:435,18,0	1/1:8,12:21:18.06:422,18,0	1/1:1,3:5:6.02:143,6,0
chr10	79294480	.	ATC	A	389.28	PASS	AB=0.960;AC=28;AF=0.636;AN=44;BaseQRankSum=4.471;DP=499;FS=1.163;HRun=0;HaplotypeScore=81.6608;InbreedingCoeff=0.2843;MQ=75.70;MQ0=23;MQRankSum=-2.401;QD=1.69;ReadPosRankSum=2.094;VQSLOD=1.6816;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:6,0:5:2.84:14,3,0	./.	./.	1/1:13,0:12:5.64:27,6,0	0/0:33,1:33:6.01:0,6,87	0/1:22,0:22:6.36:6,0,36	./.	1/1:7,0:11:11.20:53,11,0	1/1:13,0:13:1.76:33,2,0	0/1:10,0:10:0:0,0,0	0/1:18,0:18:16.58:17,0,150	1/1:16,0:16:2.45:8,2,0	1/1:9,1:11:5.58:46,6,0	1/1:17,0:17:17:83,17,0	0/0:14,0:12:4.08:0,4,17	0/0:19,0:19:21.02:0,21,247	0/0:7,0:6:1.25:0,1,3	./.	1/1:11,0:11:2.84:14,3,0	0/0:21,0:19:0:0,0,0	1/1:15,1:18:5.85:46,6,0	0/0:13,1:13:0:0,0,0	0/1:17,4:21:48.92:49,0,211	1/1:9,0:9:8.52:42,9,0	1/1:10,0:10:2.84:14,3,0	1/1:25,0:25:11.57:63,12,0	./.
chr10	79294519	.	TCTCTCTCTC	T	1150.62	PASS	AB=0.939;AC=11;AF=0.196;AN=56;BaseQRankSum=7.143;DP=539;FS=20.230;HRun=0;HaplotypeScore=154.1916;InbreedingCoeff=-0.2583;MQ=45.51;MQ0=43;MQRankSum=-7.736;QD=5.87;ReadPosRankSum=-0.957;VQSLOD=1.4770;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:18:30.04:0,30,365	0/1:11,0:10:42.18:42,0,95	0/0:26,0:6:15.04:0,15,179	0/0:42,0:6:5.91:0,6,63	0/1:15,3:16:45.30:139,0,45	0/0:30,0:29:81.74:0,82,2022	0/0:14,0:14:33.02:0,33,721	0/0:19,0:18:45.94:0,46,256	0/1:17,0:17:99:160,0,370	0/1:19,1:20:99:146,0,132	0/1:17,0:17:23.64:24,0,88	0/0:21,0:20:48.63:0,49,1425	0/0:22,0:22:57.15:0,57,1033	0/0:13,0:13:28.96:0,29,522	0/1:10,7:17:82.55:381,0,83	0/1:14,1:13:68.84:69,0,91	0/0:18,0:18:48.02:0,48,1543	0/0:8,0:6:17.57:0,18,180	0/0:20,0:16:21.65:0,22,231	0/1:10,1:11:71.62:79,0,72	0/1:22,0:17:30.07:30,0,72	0/0:18,0:18:33.08:0,33,546	0/0:17,0:15:30.98:0,31,567	0/0:26,0:25:60.20:0,60,1859	0/1:23,0:23:44.80:45,0,246	0/0:13,0:13:5.42:0,5,149	0/1:23,1:24:99:184,0,206	0/0:13,0:6:17.57:0,18,114
chr10	79294910	.	ATTAAT	A	2476.71	PASS	AC=28;AF=0.519;AN=54;BaseQRankSum=9.939;DP=527;FS=0.520;HRun=0;HaplotypeScore=154.7944;InbreedingCoeff=0.8950;MQ=87.10;MQ0=0;MQRankSum=-8.807;QD=11.74;ReadPosRankSum=-0.284;VQSLOD=3.1252;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,3299	1/1:4,2:6:12.04:188,12,0	0/0:22,0:22:60.14:0,60,1574	0/0:22,0:22:60.15:0,60,1553	1/1:13,8:21:17.24:201,17,0	0/0:23,0:23:69.24:0,69,2152	0/0:21,0:21:63.22:0,63,2036	1/1:20,0:20:3.01:42,3,0	0/0:25,0:25:75.24:0,75,2209	1/1:16,1:17:9.03:168,9,0	1/1:5,2:7:9.03:124,9,0	0/0:20,0:20:57.20:0,57,1821	0/0:26,0:26:75.24:0,75,2325	0/0:20,0:20:60.21:0,60,1893	1/1:12,6:18:21.07:299,21,0	1/1:21,2:23:21.07:348,21,0	0/0:19,0:19:54.19:0,54,1664	./.	1/1:8,4:12:12.03:176,12,0	1/1:9,5:14:15.05:220,15,0	1/1:10,0:10:6:80,6,0	0/0:21,0:21:63.22:0,63,2036	0/0:19,0:19:57.20:0,57,1844	0/0:40,0:40:99:0,117,3671	1/1:9,2:11:9.02:115,9,0	1/1:13,5:18:15.05:298,15,0	1/1:21,7:28:24.08:381,24,0	1/1:5,1:6:3.01:52,3,0
chr10	79294943	.	G	GTCACC	3124.14	PASS	AB=0.800;AC=23;AF=0.460;AN=50;BaseQRankSum=10.827;DP=387;FS=8.124;HRun=0;HaplotypeScore=137.1763;InbreedingCoeff=0.7926;MQ=103.59;MQ0=0;MQRankSum=-9.771;QD=56.80;ReadPosRankSum=3.150;VQSLOD=4.4204;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,2307	1/1:0,2:2:6.02:153,6,0	0/0:31,0:31:84.29:0,84,1910	0/0:20,0:20:57.16:0,57,1189	1/1:2,6:9:24.54:465,25,0	0/0:21,0:21:63.20:0,63,1418	0/0:22,0:22:66.23:0,66,1537	./.	0/0:28,0:28:81.26:0,81,1815	1/1:1,1:2:3.01:67,3,0	1/1:0,2:2:6.02:139,6,0	0/0:19,0:19:57.20:0,57,1308	0/0:25,0:25:75.26:0,75,1738	0/0:25,0:25:72.23:0,72,1630	1/1:3,6:9:27.09:620,27,0	1/1:0,2:2:6.02:166,6,0	0/0:21,0:21:63.15:0,63,1343	./.	0/1:3,1:4:55.35:100,0,55	1/1:1,5:6:15.05:378,15,0	./.	0/0:31,0:31:90.31:0,90,2049	0/0:21,0:21:63.22:0,63,1462	0/0:34,0:34:99:0,99,2202	1/1:0,2:2:6.02:152,6,0	1/1:0,4:5:15.05:439,15,0	1/1:2,7:9:21.07:553,21,0	1/1:2,1:3:3.01:83,3,0
chr10	79295635	.	A	AC	678.74	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=0.394;DP=536;FS=6.439;HRun=0;HaplotypeScore=87.0959;InbreedingCoeff=0.8967;MQ=74.03;MQ0=8;MQRankSum=0.634;QD=16.55;ReadPosRankSum=1.958;VQSLOD=5.9327;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:30.76:0,31,199	0/0:2,0:2:6.01:0,6,54	0/0:59,0:23:33.27:0,33,349	0/0:54,0:27:16.95:0,17,262	0/0:24,0:24:65.44:0,65,728	0/0:17,0:17:49.60:0,50,546	0/0:13,0:13:37.62:0,38,404	0/0:40,0:40:95.02:0,95,1045	0/0:21,0:21:26.92:0,27,226	0/0:27,0:27:75.93:0,76,750	0/0:16,0:16:46.64:0,47,529	1/1:10,6:16:7.60:316,8,0	1/1:7,2:9:15.08:186,15,0	1/1:9,7:16:10.30:305,10,0	0/0:18,0:18:51.05:0,51,526	0/0:16,0:16:43.88:0,44,488	0/0:16,0:15:41.97:0,42,430	0/0:11,0:11:29.98:0,30,320	0/0:17,0:17:46.57:0,47,490	0/0:10,0:10:26.99:0,27,273	0/0:4,0:4:12.03:0,12,141	0/0:9,0:9:26.91:0,27,316	0/0:10,0:10:25.58:0,26,259	0/0:10,0:10:27.50:0,27,277	0/0:16,0:16:40.62:0,41,338	0/0:25,0:25:59.98:0,60,618	0/0:22,0:22:58.66:0,59,562	0/0:25,0:23:65.95:0,66,706
chr10	79295685	.	C	CA	1309.33	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.794;DP=412;FS=0.000;HRun=3;HaplotypeScore=73.1255;InbreedingCoeff=0.9542;MQ=79.36;MQ0=0;MQRankSum=-3.217;QD=35.39;ReadPosRankSum=1.116;VQSLOD=4.1729;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.12:0,39,468	0/0:5,0:5:15.05:0,15,180	0/0:12,0:12:22.60:0,23,274	0/0:13,0:13:26.79:0,27,295	0/0:23,0:23:66.19:0,66,781	0/0:15,0:15:45.14:0,45,539	0/0:5,0:5:12.04:0,12,141	0/0:28,0:28:72.21:0,72,853	0/0:13,0:13:33.08:0,33,382	0/0:20,0:20:54.16:0,54,648	0/0:27,0:27:81.25:0,81,972	1/1:0,11:11:33.11:462,33,0	1/1:2,6:8:18.04:234,18,0	1/1:0,18:18:54.18:755,54,0	0/0:12,0:12:30.07:0,30,348	0/0:14,0:14:42.13:0,42,503	0/0:17,0:17:42.11:0,42,490	0/0:12,0:12:36.11:0,36,432	0/0:13,0:13:36.11:0,36,432	0/0:21,0:21:54.16:0,54,648	0/0:4,0:4:9.03:0,9,108	0/0:8,0:8:24.07:0,24,288	0/0:16,0:16:42.13:0,42,502	0/0:7,0:7:18.05:0,18,216	0/0:23,0:23:63.18:0,63,745	0/0:24,0:24:69.21:0,69,828	0/0:22,0:22:66.20:0,66,791	0/0:8,0:7:21.06:0,21,252
chr10	79295803	.	G	GT	6053.78	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-0.930;DP=375;FS=0.896;HRun=9;HaplotypeScore=56.3760;InbreedingCoeff=0.8961;MQ=68.77;MQ0=0;MQRankSum=0.644;QD=25.98;ReadPosRankSum=0.334;VQSLOD=5.3772;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:3.46:0,3,116	1/1:1,2:3:3.01:33,3,0	0/0:8,0:8:9.66:0,10,100	0/0:6,0:6:6:0,6,52	1/1:3,24:27:72.09:767,72,0	0/0:10,0:10:23.98:0,24,205	0/0:6,0:6:14.99:0,15,127	1/1:1,20:21:36.48:613,36,0	0/0:14,0:14:35.97:0,36,308	1/1:7,15:22:25.08:504,25,0	1/1:2,13:15:39.11:431,39,0	0/0:10,0:10:20.99:0,21,182	0/0:13,0:13:38.99:0,39,338	0/0:16,0:16:47.97:0,48,412	1/1:0,9:9:27.07:299,27,0	1/1:1,13:14:33.09:365,33,0	0/0:19,0:19:47.85:0,48,406	1/1:4,7:11:30:305,30,0	1/1:6,17:23:48.13:531,48,0	1/1:4,24:28:72.19:797,72,0	1/1:0,5:5:12.03:133,12,0	0/0:11,0:12:29.02:0,29,240	0/0:14,0:14:35.97:0,36,310	0/0:4,0:4:12:0,12,104	1/1:3,13:16:36.10:398,36,0	1/1:4,15:19:45.12:498,45,0	1/1:1,14:16:32.92:346,33,0	1/1:2,2:4:3.01:33,3,0
chr10	79300329	.	A	AC	4190.08	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=14.592;DP=434;FS=41.082;HRun=0;HaplotypeScore=81.9942;InbreedingCoeff=0.9516;MQ=60.53;MQ0=0;MQRankSum=-13.444;QD=29.93;ReadPosRankSum=1.053;VQSLOD=1.2747;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1462	1/1:0,5:2:3.01:40,3,0	0/0:23,0:19:54.03:0,54,667	0/0:21,0:19:39.40:0,39,581	1/1:0,11:9:24.08:323,24,0	0/0:25,0:25:60.17:0,60,788	0/0:20,0:20:57.19:0,57,785	1/1:1,7:7:18.95:243,19,0	0/0:22,0:22:51.17:0,51,713	1/1:1,20:17:48.16:641,48,0	1/1:0,12:10:21.07:273,21,0	0/0:29,0:29:72.19:0,72,967	0/0:23,0:23:53.82:0,54,735	0/0:22,0:22:51.14:0,51,676	1/1:0,11:10:30.10:398,30,0	1/1:0,10:10:30.10:394,30,0	0/0:15,0:15:39.12:0,39,528	1/1:0,7:7:14.27:197,14,0	1/1:0,6:6:18.06:243,18,0	1/1:0,11:10:29.93:372,30,0	1/1:0,11:10:18.06:243,18,0	0/0:18,0:18:54.13:0,54,715	0/0:18,0:18:48.16:0,48,670	0/0:21,0:21:57.15:0,57,770	1/1:1,11:10:26.03:301,26,0	1/1:0,7:7:18.06:243,18,0	1/1:0,6:6:15.05:198,15,0	1/1:0,2:2:6.02:79,6,0
chr10	79300493	.	CTGAT	C	9978.39	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=14.107;DP=485;FS=5.630;HRun=0;HaplotypeScore=94.2500;InbreedingCoeff=0.9778;MQ=91.10;MQ0=0;MQRankSum=-9.113;QD=43.20;ReadPosRankSum=1.760;VQSLOD=5.1266;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,110,2977	1/1:0,4:4:12.04:221,12,0	0/0:16,0:16:33.11:0,33,803	0/0:27,0:27:65.98:0,66,1560	1/1:1,21:22:60.21:1095,60,0	0/0:25,0:25:72.23:0,72,1812	0/0:16,0:16:39.13:0,39,1030	1/1:10,20:27:51.15:879,51,0	0/0:15,0:15:39.13:0,39,1030	1/1:3,14:17:39.11:684,39,0	1/1:1,8:9:21.07:382,21,0	0/0:19,0:19:51.16:0,51,1293	0/0:18,0:18:54.19:0,54,1392	0/0:11,0:11:33.11:0,33,871	1/1:1,11:11:30.10:552,30,0	1/1:2,12:14:36.12:662,36,0	0/0:26,0:26:72.23:0,72,1846	1/1:0,8:8:24.08:442,24,0	1/1:2,10:12:30.07:491,30,0	1/1:0,17:17:45.15:828,45,0	1/1:1,22:23:60.20:1086,60,0	0/0:9,0:9:14.78:0,15,396	0/0:19,0:19:39.13:0,39,976	0/0:13,0:13:36.11:0,36,887	1/1:1,13:14:33.11:603,33,0	1/1:2,29:30:81.25:1446,81,0	1/1:3,9:12:27.09:497,27,0	1/1:1,5:4:6.02:110,6,0
chr10	79302066	.	G	GT	9150.02	PASS	AB=0.556;AC=33;AF=0.589;AN=56;BaseQRankSum=-12.692;DP=578;FS=5.853;HRun=8;HaplotypeScore=53.1693;InbreedingCoeff=0.9442;MQ=75.40;MQ0=2;MQRankSum=-0.617;QD=26.60;ReadPosRankSum=0.362;VQSLOD=5.5021;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:74.50:0,74,658	0/1:2,8:10:0.37:250,0,0	0/0:23,0:16:5.46:0,5,161	0/0:22,0:18:32.19:0,32,315	1/1:5,27:32:56.68:871,57,0	0/0:26,0:27:70.90:0,71,612	0/0:14,0:14:42.01:0,42,380	1/1:6,28:34:59.76:910,60,0	0/0:21,0:21:48.01:0,48,439	1/1:3,17:20:51.15:588,51,0	1/1:1,19:20:54.12:607,54,0	1/1:1,17:18:48.14:554,48,0	1/1:6,20:26:44.78:506,45,0	1/1:1,19:20:39.12:450,39,0	1/1:1,16:17:39.12:450,39,0	1/1:2,17:19:51.15:589,51,0	0/0:19,0:19:54.01:0,54,488	1/1:1,12:13:30.09:346,30,0	1/1:2,17:20:56.96:605,57,0	1/1:2,27:29:69.11:761,69,0	1/1:1,10:11:27.08:312,27,0	0/0:21,0:21:42.96:0,43,437	0/0:22,0:22:57:0,57,516	0/0:15,0:15:45.01:0,45,407	0/0:19,0:19:44.54:0,45,460	1/1:2,18:21:53.97:590,54,0	1/1:3,16:19:36.11:415,36,0	1/1:1,14:15:30.09:346,30,0
chr10	79302291	.	A	AT	8436.58	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=15.572;DP=573;FS=11.567;HRun=8;HaplotypeScore=92.8474;InbreedingCoeff=0.9444;MQ=81.87;MQ0=0;MQRankSum=0.082;QD=26.53;ReadPosRankSum=-2.615;VQSLOD=3.4269;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:48:0,48,439	1/1:0,8:8:24.07:277,24,0	0/0:17,0:17:32.99:0,33,295	0/1:16,0:16:0.97:1,0,267	1/1:2,25:27:75.18:845,75,0	0/0:31,0:31:75:0,75,677	0/0:22,0:22:54.02:0,54,494	1/1:6,30:36:87.21:973,87,0	0/0:24,0:24:69.04:0,69,631	1/1:4,17:21:51.15:588,51,0	1/1:1,17:18:51.12:572,51,0	0/0:20,0:20:57.02:0,57,522	0/0:28,0:28:84.03:0,84,764	0/0:14,0:14:39:0,39,352	1/1:2,21:23:60.18:692,60,0	1/1:3,16:19:23.68:527,24,0	0/0:23,0:23:54.02:0,54,494	1/1:1,8:9:21.06:242,21,0	1/1:7,11:18:32.78:371,33,0	1/1:5,16:22:52.27:559,52,0	1/1:1,16:16:45.13:519,45,0	0/0:21,0:21:63.03:0,63,577	0/0:17,0:18:50.06:0,50,445	0/0:16,0:16:39.02:0,39,356	1/1:2,21:23:60.18:693,60,0	1/1:1,21:22:63.14:702,63,0	1/1:7,24:32:72.04:805,72,0	1/1:5,2:7:6.02:69,6,0
chr10	79302694	.	ACAC	A	11316.30	PASS	AB=0.517;AC=29;AF=0.518;AN=56;BaseQRankSum=16.374;DP=652;FS=11.619;HRun=0;HaplotypeScore=114.3248;InbreedingCoeff=0.9220;MQ=83.41;MQ0=0;MQRankSum=-5.809;QD=35.92;ReadPosRankSum=1.480;VQSLOD=4.9802;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,111,2417	1/1:0,5:5:15.05:241,15,0	0/0:25,0:25:51.92:0,52,1201	0/0:20,0:20:47.52:0,48,851	1/1:1,19:20:42.14:675,42,0	0/0:19,0:19:51.18:0,51,1123	0/0:26,0:26:72.20:0,72,1411	1/1:3,25:28:75.23:1160,75,0	0/0:28,0:28:81.21:0,81,1719	1/1:1,22:23:57.18:893,57,0	1/1:2,13:15:30.10:482,30,0	0/0:31,0:31:93.32:0,93,2021	0/0:31,0:31:87.30:0,87,1896	0/0:36,0:36:99:0,99,2179	1/1:0,33:33:75.26:1205,75,0	0/1:2,28:30:9.05:810,0,9	0/0:19,0:19:54.19:0,54,1192	1/1:0,6:6:12.04:193,12,0	1/1:3,13:16:39.11:572,39,0	1/1:3,20:23:42.14:675,42,0	1/1:3,33:36:84.29:1350,84,0	0/0:19,0:19:54.16:0,54,1145	0/0:15,0:15:45.15:0,45,993	0/0:27,0:27:72.25:0,72,1567	1/1:0,26:26:63.21:1012,63,0	1/1:3,20:23:63.20:988,63,0	1/1:2,25:27:57.19:915,57,0	1/1:1,3:4:9.03:145,9,0
chr10	79302834	.	A	AGTGTGTGTGT	3233.06	PASS	AB=1.000;AC=30;AF=0.577;AN=52;BaseQRankSum=1.865;DP=650;FS=0.000;HRun=0;HaplotypeScore=236.5945;InbreedingCoeff=0.6457;MQ=65.25;MQ0=11;MQRankSum=-2.401;QD=9.01;ReadPosRankSum=-1.170;VQSLOD=2.2590;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:32:87.81:88,0,192	1/1:16,0:16:3.46:25,3,0	./.	./.	1/1:24,0:24:15.39:317,15,0	0/0:21,0:21:8.94:0,9,107	0/1:23,0:24:6.66:7,0,273	1/1:31,0:31:7.80:68,8,0	0/0:18,0:20:8.56:0,9,153	1/1:20,0:20:18.04:415,18,0	1/1:9,0:9:6.02:145,6,0	0/0:22,0:23:11.80:0,12,172	0/0:14,0:15:6.01:0,6,72	0/0:17,0:17:14.40:0,14,354	1/1:16,0:20:6.02:126,6,0	1/1:21,3:28:4.78:151,5,0	0/0:22,0:22:20.25:0,20,379	1/1:13,0:13:12.51:323,13,0	1/1:21,0:20:13.57:227,14,0	1/1:25,0:25:6.57:53,7,0	1/1:38,0:37:6.02:189,6,0	0/0:28,0:28:15.02:0,15,303	0/0:25,0:25:13.72:0,14,243	0/0:24,0:24:17.54:0,18,269	0/0:13,0:13:2.18:0,2,8	1/1:26,0:25:33.01:655,33,0	1/1:25,0:24:20.93:464,21,0	1/1:7,0:7:9.01:168,9,0
chr10	79304214	.	T	TTTC	3802.33	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.150;DP=554;FS=4.062;HRun=0;HaplotypeScore=77.6664;InbreedingCoeff=0.9938;MQ=88.68;MQ0=0;MQRankSum=-4.462;QD=54.32;ReadPosRankSum=-0.780;VQSLOD=5.3099;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.20:0,66,1026	0/0:10,0:10:30.10:0,30,490	0/0:19,0:19:46.75:0,47,774	0/0:22,0:22:58.08:0,58,904	0/0:23,0:23:69.22:0,69,1096	0/0:28,0:27:81.26:0,81,1298	0/0:13,0:13:36.12:0,36,581	0/0:43,0:43:99:0,114,1811	0/0:16,0:16:45.13:0,45,706	0/0:21,0:21:63.22:0,63,1029	0/0:18,0:18:48.16:0,48,758	1/1:2,14:17:39.13:859,39,0	1/1:3,17:21:54.19:1203,54,0	1/1:3,29:32:78.27:1741,78,0	0/0:33,0:33:90.29:0,90,1446	0/0:14,0:14:42.14:0,42,686	0/0:18,0:18:48.16:0,48,784	0/0:18,0:18:51.17:0,51,816	0/0:11,0:11:30.10:0,30,490	0/0:20,0:20:57.18:0,57,907	0/0:20,0:20:60.20:0,60,977	0/0:12,0:12:36.11:0,36,564	0/0:22,0:22:63.22:0,63,1029	0/0:13,0:12:39.13:0,39,637	0/0:17,0:17:51.16:0,51,804	0/0:21,0:21:63.22:0,63,1029	0/0:24,0:22:69.24:0,69,1123	0/0:5,0:5:15.05:0,15,245
chr10	79307134	.	TA	T	1066.30	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.085;DP=420;FS=3.047;HRun=8;HaplotypeScore=57.9913;InbreedingCoeff=0.9653;MQ=72.91;MQ0=0;MQRankSum=-0.244;QD=23.70;ReadPosRankSum=3.810;VQSLOD=4.3746;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,33:36:96.15:927,96,0	0/0:5,0:5:12.04:0,12,145	0/0:9,0:9:21.05:0,21,239	0/0:11,0:11:26.11:0,26,291	0/0:14,0:14:36.11:0,36,435	0/0:15,0:15:45.10:0,45,528	0/0:12,0:12:33.10:0,33,399	0/0:34,0:34:96.24:0,96,1104	1/1:0,9:9:27.04:261,27,0	0/0:16,0:16:45.12:0,45,523	0/0:6,0:6:18.06:0,18,217	0/0:15,0:15:39.12:0,39,471	0/0:12,0:12:33.04:0,33,350	0/0:12,0:13:35.98:0,36,414	0/0:14,0:14:39.07:0,39,442	0/0:9,0:9:21.05:0,21,242	0/0:27,0:26:78.24:0,78,942	0/0:18,0:18:45.14:0,45,544	0/0:17,0:17:48.14:0,48,569	0/0:20,0:20:60.18:0,60,725	0/0:9,0:9:24.07:0,24,290	0/0:6,0:6:18.06:0,18,217	0/0:12,0:12:36.11:0,36,435	0/0:7,0:7:18.06:0,18,217	0/0:14,0:14:30.08:0,30,362	0/0:21,0:21:60.17:0,60,715	0/0:26,0:26:72.21:0,72,858	0/0:13,0:13:33.10:0,33,398
chr10	79307328	.	AT	A	640.29	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.804;DP=353;FS=6.452;HRun=10;HaplotypeScore=65.4014;InbreedingCoeff=0.8721;MQ=68.47;MQ0=2;MQRankSum=1.490;QD=16.42;ReadPosRankSum=3.006;VQSLOD=4.2421;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.17:0,63,694	0/0:6,0:6:14.76:0,15,95	0/0:9,0:5:6.02:0,6,66	0/0:10,0:6:0:0,0,0	0/0:17,0:17:50.19:0,50,317	0/0:14,0:14:39.11:0,39,431	0/0:9,0:9:24.05:0,24,257	0/0:38,0:36:88.35:0,88,569	0/0:9,0:9:23.43:0,23,241	0/0:4,0:4:11.50:0,12,60	0/0:12,0:12:29.46:0,29,182	1/1:0,16:16:38.99:339,39,0	1/1:0,10:10:26.99:234,27,0	1/1:0,13:13:23.65:208,24,0	0/0:6,0:6:14.71:0,15,90	0/0:4,0:4:8.83:0,9,54	0/0:15,0:15:39.11:0,39,431	0/0:17,0:17:41.28:0,41,259	0/0:16,0:16:38.08:0,38,231	0/0:17,0:17:50:0,50,303	0/0:10,0:10:26.51:0,27,163	0/0:6,0:6:18.05:0,18,199	0/0:12,0:12:27.06:0,27,290	0/0:8,0:8:21.06:0,21,232	0/0:12,0:12:32.36:0,32,197	0/0:13,0:13:34.89:0,35,194	0/0:12,0:12:29.61:0,30,195	0/0:15,0:15:26.83:0,27,202
chr10	79309350	.	G	GTGTGTGTGTGTA	4633.65	PASS	AB=0.927;AC=22;AF=0.407;AN=54;BaseQRankSum=0.565;DP=634;FS=17.758;HRun=0;HaplotypeScore=185.9114;InbreedingCoeff=0.3959;MQ=48.36;MQ0=36;MQRankSum=-0.045;QD=14.90;ReadPosRankSum=2.344;VQSLOD=2.6375;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:65.86:0,66,540	1/1:4,1:5:2.93:24,3,0	./.	0/0:39,0:8:8.93:0,9,78	1/1:29,0:28:23.30:351,23,0	0/0:25,0:25:7.06:0,7,270	0/0:16,0:16:14.28:0,14,209	0/1:29,0:26:26.28:228,0,26	0/0:14,0:14:26.75:0,27,282	1/1:37,0:35:5.17:730,5,0	0/0:6,0:15:2.37:0,2,9	0/0:22,0:22:32.58:0,33,460	0/0:18,0:17:43.47:0,43,487	0/0:17,0:17:32.96:0,33,475	1/1:10,1:11:14.47:250,14,0	1/1:5,14:23:2.88:171,3,0	0/0:27,0:25:62.50:0,62,781	0/1:15,0:14:32.84:213,0,33	0/1:18,0:17:32.65:204,0,33	1/1:27,0:26:44.97:764,45,0	0/1:29,0:27:24.20:169,0,24	0/0:32,0:31:68.65:0,69,699	0/0:17,0:17:35.91:0,36,369	0/0:22,0:22:50.46:0,50,661	0/1:18,0:18:99:121,0,104	0/1:14,27:43:40.50:883,0,40	1/1:18,0:16:13.28:456,13,0	1/1:5,0:5:6.31:69,6,0
chr10	79313372	.	C	CGAATGAATGAAT	19756.80	PASS	AB=0.556;AC=33;AF=0.589;AN=56;BaseQRankSum=-5.953;DP=658;FS=17.547;HRun=0;HaplotypeScore=173.6494;InbreedingCoeff=0.8770;MQ=64.96;MQ0=3;MQRankSum=-11.439;QD=47.84;ReadPosRankSum=-5.375;VQSLOD=2.4685;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:36:24.08:609,24,0	1/1:2,8:10:8.99:369,9,0	0/0:21,0:18:18.06:0,18,443	0/0:17,0:14:15.05:0,15,368	1/1:8,22:35:45.15:2191,45,0	0/0:23,0:23:45.14:0,45,1430	0/0:18,0:18:36.08:0,36,1124	1/1:39,0:39:75.09:2496,75,0	1/1:5,0:21:24.08:617,24,0	1/1:6,8:20:33.10:1537,33,0	1/1:4,11:20:36.04:1801,36,0	0/0:28,0:28:63.13:0,63,1907	0/0:18,0:18:36.11:0,36,1119	0/0:29,0:29:45.13:0,45,1319	1/1:5,16:29:27.09:1580,27,0	1/1:4,11:25:30.10:1266,30,0	0/0:28,0:28:48.09:0,48,1467	1/1:7,4:13:3.01:176,3,0	1/1:15,9:26:36.15:589,36,0	1/1:15,14:34:41.87:1826,42,0	1/1:16,0:16:9.03:345,9,0	0/0:23,0:23:57.18:0,57,1795	0/0:21,0:21:39.13:0,39,1277	0/0:19,0:19:39.13:0,39,1321	0/1:3,0:15:9.63:13,0,10	1/1:9,14:36:65.70:2422,66,0	1/1:11,14:30:27.09:1570,27,0	1/1:1,3:8:6.02:349,6,0
chr10	79313521	.	C	CAT	715.50	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-2.458;DP=607;FS=0.966;HRun=0;HaplotypeScore=81.9961;InbreedingCoeff=0.8487;MQ=61.63;MQ0=1;MQRankSum=1.090;QD=29.81;ReadPosRankSum=2.170;VQSLOD=4.8767;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:60.17:0,60,756	0/0:10,0:10:24.05:0,24,292	0/1:4,0:2:0:0,0,0	0/0:8,0:6:9.50:0,9,112	0/0:28,0:28:72.23:0,72,926	0/0:25,0:25:72.23:0,72,927	0/0:24,0:24:57.18:0,57,733	0/0:49,0:49:99:0,123,1551	0/0:17,0:17:45.15:0,45,579	0/0:29,0:29:78.25:0,78,993	0/0:32,0:33:93.11:0,93,1144	0/0:16,0:16:36.10:0,36,442	0/0:15,0:15:36.12:0,36,463	0/0:17,0:17:42.14:0,42,540	0/0:18,0:18:51.10:0,51,635	0/0:14,0:14:39.11:0,39,487	0/0:19,0:19:57.14:0,57,701	0/0:15,0:15:36.12:0,36,462	0/0:16,0:16:42.14:0,42,541	0/0:32,0:32:81.26:0,81,1042	0/0:10,0:10:27.09:0,27,347	0/0:22,0:22:57.17:0,57,719	0/0:32,0:32:87.28:0,87,1119	0/0:18,0:18:48.16:0,48,615	1/1:3,17:20:48.16:810,48,0	0/0:28,0:28:78.19:0,78,960	0/0:39,0:39:96.31:0,96,1235	0/0:21,0:21:63.20:0,63,810
chr10	79313970	.	A	AGT	56.42	PASS	AB=0.636;AC=1;AF=0.018;AN=56;BaseQRankSum=3.439;DP=686;FS=8.881;HRun=0;HaplotypeScore=102.6345;InbreedingCoeff=-0.0193;MQ=84.20;MQ0=2;MQRankSum=-3.290;QD=8.06;ReadPosRankSum=-1.099;VQSLOD=2.5561;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,2165	0/0:6,0:5:12.04:0,12,196	0/0:27,0:27:78.22:0,78,1193	0/0:28,0:28:80.82:0,81,1243	0/0:24,0:24:66.23:0,66,1076	0/0:24,0:24:72.23:0,72,1145	0/0:30,0:30:90.29:0,90,1429	0/0:24,0:24:69.23:0,69,1094	0/0:21,0:21:63.22:0,63,1026	0/0:28,0:28:81.28:0,81,1317	0/0:39,0:36:99:0,99,1588	0/0:21,0:21:63.21:0,63,1010	0/0:34,0:34:96.33:0,96,1566	0/0:26,0:26:75.26:0,75,1218	0/0:22,0:22:57.18:0,57,904	0/0:30,0:30:84.27:0,84,1340	0/0:23,0:23:69.24:0,69,1118	0/0:16,0:16:45.15:0,45,717	0/0:26,0:26:75.25:0,75,1191	0/0:43,0:43:99:0,114,1859	0/0:24,0:24:72.25:0,72,1175	0/0:14,0:14:42.14:0,42,683	0/0:16,0:16:48.16:0,48,778	0/0:12,0:12:36.12:0,36,583	0/0:13,0:13:39.12:0,39,609	0/0:30,0:30:87.29:0,87,1393	0/0:33,0:33:90.31:0,90,1465	0/1:3,4:7:99:131,0,126
chr10	79314027	.	C	CAG	18180.02	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-16.057;DP=664;FS=0.291;HRun=0;HaplotypeScore=72.5331;InbreedingCoeff=0.9991;MQ=74.14;MQ0=2;MQRankSum=-4.260;QD=49.95;ReadPosRankSum=0.552;VQSLOD=5.6399;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.29:0,96,1424	1/1:1,12:12:30.10:578,30,0	0/0:26,0:26:72.23:0,72,1067	0/0:23,0:23:63.21:0,63,957	1/1:0,30:29:78.26:1439,78,0	0/0:27,0:27:78.26:0,78,1194	0/0:25,0:25:75.23:0,75,1105	1/1:2,27:29:87.27:1602,87,0	0/0:22,0:22:66.22:0,66,995	1/1:2,32:33:90.29:1681,90,0	1/1:2,21:21:48.16:923,48,0	0/0:22,0:22:66.22:0,66,1010	0/0:32,0:32:87.27:0,87,1289	0/0:24,0:24:69.15:0,69,963	1/1:0,28:28:78.27:1506,78,0	1/1:1,33:34:96.33:1854,96,0	0/0:23,0:23:66.21:0,66,990	1/1:1,10:11:27.09:521,27,0	1/1:0,17:18:54.16:952,54,0	1/1:3,38:41:99:1968,102,0	1/1:1,13:14:39.13:753,39,0	0/0:8,0:8:21.07:0,21,321	0/0:15,0:15:45.15:0,45,670	0/0:21,0:21:51.16:0,51,758	1/1:1,13:14:36.12:694,36,0	1/1:0,33:33:90.29:1692,90,0	1/1:3,27:30:75.26:1437,75,0	1/1:0,12:11:30.10:579,30,0
chr10	79314276	.	CTA	C	2063.77	PASS	AB=0.964;AC=26;AF=0.481;AN=54;BaseQRankSum=5.401;DP=482;FS=15.719;HRun=0;HaplotypeScore=142.6219;InbreedingCoeff=0.7301;MQ=87.87;MQ0=4;MQRankSum=-5.907;QD=7.85;ReadPosRankSum=1.350;VQSLOD=2.1665;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:21.54:0,22,385	1/1:1,6:7:4.26:40,4,0	0/1:36,1:27:5.06:5,0,286	0/0:56,0:37:24.53:0,25,292	1/1:8,17:25:13.63:115,14,0	0/0:16,0:16:48.15:0,48,825	0/0:13,0:13:39.13:0,39,708	0/1:20,1:20:23.18:101,0,23	0/0:11,0:11:23.87:0,24,384	1/1:7,9:15:30.08:352,30,0	1/1:6,18:24:4.54:48,5,0	0/0:18,0:18:15.04:0,15,241	0/0:16,0:16:42.14:0,42,770	0/0:15,0:15:42.14:0,42,758	1/1:7,8:15:11.75:100,12,0	1/1:3,13:16:5.77:75,6,0	0/0:13,0:13:27.09:0,27,495	1/1:4,9:13:9.03:113,9,0	1/1:12,1:13:21.50:273,21,0	1/1:6,14:20:11.64:150,12,0	./.	0/0:1,0:1:3.01:0,3,55	0/0:8,0:8:21.07:0,21,370	0/0:7,0:7:18.06:0,18,323	0/0:2,12:14:0.47:0,0,1	1/1:8,14:20:39.36:480,39,0	1/1:8,18:25:25.27:301,25,0	1/1:5,3:8:9.03:110,9,0
chr10	79314278	.	A	ATCTC	3694.33	PASS	AC=28;AF=0.519;AN=54;BaseQRankSum=3.104;DP=475;FS=2.842;HRun=0;HaplotypeScore=150.2219;InbreedingCoeff=0.8869;MQ=88.13;MQ0=5;MQRankSum=-3.991;QD=15.92;ReadPosRankSum=-1.376;VQSLOD=3.2717;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:20.95:0,21,418	1/1:7,0:7:6.01:64,6,0	0/0:36,0:26:19.09:0,19,275	0/0:57,0:37:16.38:0,16,241	1/1:24,0:24:17.63:254,18,0	0/0:16,0:16:48.10:0,48,814	0/0:13,0:13:39.12:0,39,743	1/1:19,0:18:9.91:382,10,0	0/0:11,0:11:21.11:0,21,384	1/1:12,0:11:33.05:402,33,0	1/1:24,0:24:14.47:148,14,0	0/0:18,0:18:15.04:0,15,254	0/0:18,0:18:42.14:0,42,837	0/0:14,0:14:42.13:0,42,780	1/1:15,0:15:21:224,21,0	1/1:16,0:16:12.03:149,12,0	0/0:13,0:13:26.94:0,27,537	1/1:12,0:12:9.03:110,9,0	1/1:2,10:13:36.02:410,36,0	1/1:20,0:20:26.89:274,27,0	./.	0/0:1,0:1:3.01:0,3,60	0/0:8,0:8:5.91:0,6,329	0/0:6,0:6:18.06:0,18,331	1/1:14,0:14:2.99:25,3,0	1/1:22,0:20:57.06:649,57,0	1/1:26,0:25:35.56:447,36,0	1/1:8,0:8:15.01:156,15,0
chr10	79314288	.	CTATATA	C	1496.95	PASS	AB=0.945;AC=19;AF=0.365;AN=52;BaseQRankSum=7.647;DP=433;FS=19.026;HRun=0;HaplotypeScore=154.3930;InbreedingCoeff=0.4579;MQ=83.07;MQ0=7;MQRankSum=-6.998;QD=7.76;ReadPosRankSum=3.341;VQSLOD=1.6277;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:16:20.04:0,20,356	1/1:7,0:7:2.87:33,3,0	0/0:31,0:21:14.98:0,15,224	0/0:54,0:32:16.92:0,17,179	0/1:19,3:22:7.34:68,0,7	0/0:13,0:13:39.12:0,39,1188	0/0:13,0:13:39.13:0,39,1061	0/1:16,0:16:0:0,0,123	0/0:9,0:10:20.71:0,21,279	1/1:11,1:10:13.51:295,14,0	0/1:19,1:20:0.52:1,0,1	0/0:17,0:17:9.03:0,9,198	0/0:18,0:18:39.12:0,39,643	0/0:12,0:12:36.04:0,36,469	0/1:12,1:13:8.64:29,0,9	1/1:15,2:17:8.51:60,9,0	0/0:21,0:21:45.47:0,45,1024	1/1:9,0:9:9.03:127,9,0	0/1:8,0:8:1.93:214,0,2	1/1:14,4:18:0.94:82,1,0	./.	0/0:1,0:1:3.01:0,3,101	0/0:7,0:7:21.04:0,21,411	0/0:5,0:5:15.01:0,15,306	./.	0/1:22,0:19:21.23:407,0,21	0/1:19,4:22:1.74:254,0,2	1/1:4,1:4:8.96:86,9,0
chr10	79314300	.	CTCTATT	C	1853.86	PASS	AB=0.937;AC=32;AF=0.615;AN=52;BaseQRankSum=4.083;DP=446;FS=6.071;HRun=0;HaplotypeScore=147.1079;InbreedingCoeff=0.4741;MQ=64.06;MQ0=14;MQRankSum=-3.043;QD=5.19;ReadPosRankSum=1.575;VQSLOD=2.2363;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:13:6.58:69,7,0	1/1:9,0:9:5.88:43,6,0	0/1:29,0:11:5.50:5,0,44	0/1:39,0:17:8.18:15,0,8	./.	0/0:14,0:14:39.05:0,39,446	0/0:9,0:9:24.03:0,24,247	1/1:25,0:22:56.01:364,56,0	1/1:8,0:8:9.53:118,10,0	1/1:17,0:13:16.68:139,17,0	0/1:27,0:24:0.16:0,0,0	0/1:2,17:19:0:0,0,0	1/1:16,0:16:29.99:297,30,0	1/1:11,0:11:27:296,27,0	0/1:15,0:15:0.07:0,0,0	1/1:15,0:15:4.19:21,4,0	0/0:22,0:22:55.58:0,56,857	1/1:12,0:12:12.86:102,13,0	1/1:9,0:9:3.81:149,4,0	1/1:23,0:21:2.62:18,3,0	./.	0/0:2,0:2:6.01:0,6,119	0/0:4,0:4:12.03:0,12,223	0/0:4,0:4:12.03:0,12,205	0/1:13,0:13:0:0,0,0	0/1:22,0:19:11.39:199,0,11	1/1:26,0:25:19.22:154,19,0	0/1:6,0:5:8.59:29,0,9
chr10	79315564	.	C	CTTG	17927.63	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-8.917;DP=524;FS=1.464;HRun=0;HaplotypeScore=77.7559;InbreedingCoeff=0.9991;MQ=87.35;MQ0=0;MQRankSum=-8.221;QD=59.56;ReadPosRankSum=-0.455;VQSLOD=6.4128;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.13:0,39,649	1/1:2,5:7:21.07:427,21,0	0/0:27,0:27:72.21:0,72,1115	0/0:14,0:14:28.19:0,28,432	1/1:5,24:29:78.20:1601,78,0	0/0:27,0:27:81.28:0,81,1349	0/0:11,0:11:33.09:0,33,522	1/1:10,32:41:99:2427,111,0	0/0:18,0:18:54.18:0,54,899	1/1:2,17:18:48.16:1088,48,0	1/1:4,13:17:47.86:800,48,0	0/0:16,0:16:48.16:0,48,799	0/0:16,0:16:45.15:0,45,744	0/0:13,0:13:39.13:0,39,649	1/1:3,13:16:48.15:1024,48,0	1/1:1,11:12:33.11:747,33,0	0/0:22,0:22:60.21:0,60,998	1/1:1,24:25:69.24:1562,69,0	1/1:6,13:19:54.19:1200,54,0	1/1:5,21:26:72.25:1590,72,0	1/1:2,16:18:48.16:1057,48,0	0/0:16,0:16:48.16:0,48,797	0/0:21,0:21:63.20:0,63,1024	0/0:9,0:9:27.09:0,27,449	1/1:2,16:18:54.12:1173,54,0	1/1:7,19:26:75.20:1564,75,0	1/1:3,13:16:42.14:921,42,0	1/1:0,11:11:33.11:747,33,0
chr10	79315621	.	A	AT	8546.39	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-0.967;DP=500;FS=0.358;HRun=8;HaplotypeScore=70.9425;InbreedingCoeff=0.9699;MQ=68.79;MQ0=0;MQRankSum=-5.101;QD=28.02;ReadPosRankSum=0.081;VQSLOD=5.1821;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.02:0,42,384	1/1:0,5:5:15.04:173,15,0	0/0:9,0:9:20.35:0,20,162	0/0:9,0:9:2.57:0,3,65	1/1:3,23:27:38.55:665,39,0	0/0:31,0:31:87.03:0,87,792	0/0:14,0:14:36.01:0,36,329	1/1:10,30:40:90.19:977,90,0	0/0:12,0:12:33:0,33,297	1/1:4,19:23:57.17:658,57,0	1/1:3,19:22:57.17:658,57,0	0/0:17,0:17:48.02:0,48,439	0/0:19,0:19:51.01:0,51,462	0/0:16,0:16:47.99:0,48,429	1/1:1,18:19:51.08:572,51,0	1/1:0,16:16:48.14:554,48,0	0/0:27,0:27:68.99:0,69,620	1/1:1,16:17:48.10:538,48,0	1/1:3,18:21:54.16:623,54,0	1/1:3,27:30:75.22:864,75,0	1/1:2,10:12:27.04:297,27,0	0/0:7,0:7:20.51:0,21,174	0/0:11,0:11:29.96:0,30,265	0/0:8,0:8:21.01:0,21,192	1/1:2,14:17:45.09:504,45,0	1/1:4,18:23:62.97:685,63,0	1/1:2,15:17:42.12:485,42,0	1/1:5,11:16:27.01:295,27,0
chr10	79316854	.	C	CT	13597.03	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-0.511;DP=614;FS=2.505;HRun=6;HaplotypeScore=85.0876;InbreedingCoeff=0.9940;MQ=81.06;MQ0=1;MQRankSum=-6.009;QD=30.83;ReadPosRankSum=1.696;VQSLOD=5.3285;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:23:51.16:635,51,0	1/1:0,7:7:21.07:264,21,0	0/0:23,0:22:35.15:0,35,418	0/0:19,0:18:47.82:0,48,453	1/1:2,28:30:78.12:920,78,0	0/0:29,0:29:81.18:0,81,826	0/0:21,0:21:60.10:0,60,598	1/1:10,36:45:80.73:1313,81,0	1/1:0,12:12:33.11:415,33,0	1/1:4,22:26:69.22:860,69,0	1/1:7,18:24:67.38:760,67,0	1/1:2,17:19:48.15:604,48,0	1/1:2,22:24:51.16:641,51,0	1/1:2,22:24:63.20:791,63,0	1/1:3,17:20:48.15:604,48,0	1/1:2,14:16:45.12:551,45,0	0/0:23,0:23:57.13:0,57,580	1/1:3,12:15:33.11:412,33,0	1/1:4,12:16:36.12:452,36,0	1/1:8,22:30:84.07:940,84,0	1/1:3,16:19:45.14:566,45,0	0/0:22,0:22:60.13:0,60,611	0/0:23,0:23:60.12:0,60,605	0/0:13,0:13:36.08:0,36,367	1/1:4,10:14:33.07:398,33,0	1/1:1,28:29:84.26:1045,84,0	1/1:4,37:41:99:1274,102,0	1/1:1,4:5:12.04:151,12,0
chr10	79316940	.	GT	G	604.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.832;DP=527;FS=18.568;HRun=2;HaplotypeScore=115.6022;InbreedingCoeff=0.8963;MQ=76.12;MQ0=0;MQRankSum=-2.720;QD=30.25;ReadPosRankSum=0.762;VQSLOD=1.9617;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.19:0,57,848	0/0:9,0:9:24.08:0,24,359	0/0:22,0:22:63.06:0,63,847	0/0:7,0:6:18.02:0,18,234	0/0:38,0:38:99:0,102,1447	0/0:17,0:17:51.16:0,51,743	0/0:15,0:15:45.12:0,45,650	0/0:35,0:35:99:0,102,1482	0/0:14,0:14:42.14:0,42,629	0/0:20,0:20:57.19:0,57,854	0/0:19,0:19:54.05:0,54,748	0/0:19,0:19:51.17:0,51,762	0/0:29,0:29:78.25:0,78,1149	0/0:21,0:21:60.18:0,60,861	0/0:18,0:18:54.11:0,54,773	0/0:10,0:10:30.10:0,30,449	0/0:18,0:18:54.14:0,54,766	0/0:11,0:11:33.11:0,33,483	0/0:19,0:19:48.15:0,48,701	0/0:16,0:16:48.16:0,48,718	0/0:17,0:17:51.09:0,51,693	0/0:24,0:24:72.20:0,72,995	0/0:23,0:23:69.22:0,69,1013	0/0:15,0:15:45.14:0,45,651	1/1:1,19:20:54.18:700,54,0	0/0:17,0:17:51.17:0,51,764	0/0:31,0:31:87.24:0,87,1271	0/0:2,0:2:6.02:0,6,90
chr10	79317510	.	T	TAA	21537.38	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-15.925;DP=691;FS=4.298;HRun=1;HaplotypeScore=71.7989;InbreedingCoeff=0.9974;MQ=87.33;MQ0=2;MQRankSum=-3.023;QD=50.44;ReadPosRankSum=1.583;VQSLOD=4.8300;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:35:84.29:1705,84,0	1/1:0,10:10:24.08:487,24,0	0/0:29,0:29:84.22:0,84,1229	0/0:17,0:17:44.33:0,44,764	1/1:1,35:40:99:1802,99,0	0/0:27,0:27:78.24:0,78,1222	0/0:18,0:18:51.15:0,51,782	1/1:0,30:31:87.26:1629,87,0	1/1:0,32:34:78.27:1583,78,0	1/1:1,27:29:84.25:1576,84,0	1/1:0,17:20:47.98:809,48,0	0/0:24,0:24:72.22:0,72,1121	0/0:20,0:20:60.19:0,60,947	0/0:22,0:22:63.19:0,63,978	1/1:0,27:27:72.25:1462,72,0	1/1:0,15:15:39.13:792,39,0	0/0:28,0:28:81.24:0,81,1260	1/1:1,12:13:30.10:609,30,0	1/1:0,16:18:54.15:996,54,0	1/1:0,45:46:99:2457,132,0	1/1:1,21:22:57.15:1116,57,0	0/0:28,0:28:81.21:0,81,1200	0/0:27,0:27:81.24:0,81,1248	0/0:24,0:23:69.16:0,69,1042	1/1:1,24:24:54.19:1095,54,0	1/1:0,17:21:57.18:1112,57,0	1/1:0,35:36:99:2003,99,0	1/1:0,5:5:15.05:304,15,0
chr10	79318078	.	TAA	T	14073.86	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=15.753;DP=597;FS=10.981;HRun=2;HaplotypeScore=97.5922;InbreedingCoeff=0.9946;MQ=76.33;MQ0=0;MQRankSum=-3.266;QD=45.55;ReadPosRankSum=1.845;VQSLOD=3.7148;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.19:0,69,1293	1/1:0,4:4:12.04:196,12,0	0/0:11,0:11:33.11:0,33,619	0/0:13,0:13:39.13:0,39,737	1/1:0,27:27:78.19:1206,78,0	0/0:21,0:21:60.19:0,60,1155	0/0:15,0:15:45.15:0,45,863	1/1:0,36:36:99:1750,108,0	0/0:22,0:22:66.23:0,66,1319	1/1:0,32:32:96.33:1562,96,0	1/1:0,15:15:45.15:734,45,0	0/0:24,0:24:72.25:0,72,1435	0/0:16,0:16:48.16:0,48,940	0/0:30,0:30:90.31:0,90,1798	1/1:0,35:35:99:1713,105,0	1/1:0,24:24:69.24:1125,69,0	0/0:26,0:26:75.21:0,75,1402	1/1:0,14:14:33.11:538,33,0	1/1:0,13:13:36.12:587,36,0	1/1:0,26:26:75.25:1187,75,0	1/1:0,18:18:39.13:636,39,0	0/0:22,0:22:66.21:0,66,1249	0/0:22,0:22:66.23:0,66,1308	0/0:21,0:21:63.22:0,63,1259	0/0:22,0:22:66.23:0,66,1299	1/1:0,24:24:72.22:1125,72,0	1/1:0,32:32:87.30:1420,87,0	1/1:0,9:9:18.06:294,18,0
chr10	79319279	.	C	CT	219.43	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.152;DP=515;FS=2.496;HRun=10;HaplotypeScore=65.5907;InbreedingCoeff=0.8420;MQ=72.15;MQ0=0;MQRankSum=0.069;QD=16.88;ReadPosRankSum=-0.273;VQSLOD=4.0083;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:38.95:0,39,320	0/0:8,0:8:17.95:0,18,145	0/0:10,0:10:19.97:0,20,145	0/0:7,0:7:3.45:0,3,26	0/0:29,0:30:76.91:0,77,619	0/0:25,0:25:65.91:0,66,542	0/0:12,0:12:29.95:0,30,246	0/0:26,0:26:50.92:0,51,419	0/0:15,0:15:35.95:0,36,296	0/0:24,1:26:29.94:0,30,440	0/0:25,0:25:65.92:0,66,542	0/0:17,0:17:41.93:0,42,345	0/0:23,0:23:47.88:0,48,387	0/0:15,0:15:38.94:0,39,320	0/0:16,0:16:38.95:0,39,320	0/0:21,0:21:50.92:0,51,419	0/0:18,0:18:41.91:0,42,345	0/0:21,0:22:58.95:0,59,474	0/0:25,1:26:34.12:0,34,483	0/0:26,0:27:70.94:0,71,572	0/0:20,0:20:38.88:0,39,317	0/0:13,0:13:35.95:0,36,295	0/0:16,0:17:43.98:0,44,351	0/0:15,0:15:32.94:0,33,271	1/1:1,12:13:30.07:314,30,0	0/0:22,0:22:59.91:0,60,492	0/0:21,0:22:55.95:0,56,449	0/0:6,0:6:17.98:0,18,148
chr10	79319649	.	TC	T	106.40	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.379;DP=607;FS=18.716;HRun=2;HaplotypeScore=54.6903;InbreedingCoeff=0.9662;MQ=86.72;MQ0=0;MQRankSum=-1.959;QD=13.30;ReadPosRankSum=0.795;VQSLOD=1.1741;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.26:0,87,1262	0/0:5,0:5:15.05:0,15,225	0/0:23,0:23:66.20:0,66,966	0/0:19,0:19:57.18:0,57,814	0/0:34,0:34:99:0,102,1507	0/0:19,0:19:57.19:0,57,854	0/0:22,0:22:66.22:0,66,988	0/0:42,0:42:99:0,126,1888	0/0:22,0:22:66.22:0,66,979	0/0:16,0:16:48.08:0,48,692	0/0:19,0:19:57.18:0,57,835	0/0:17,0:17:51.17:0,51,763	0/0:33,0:33:99:0,99,1482	0/0:18,0:18:54.17:0,54,789	0/0:31,0:31:90.30:0,90,1348	0/0:18,0:18:54.18:0,54,809	0/0:23,0:23:69.23:0,69,1034	0/0:11,0:11:33.11:0,33,495	0/0:17,0:17:51.17:0,51,763	0/0:34,0:34:99:0,102,1527	0/0:30,0:30:90.30:0,90,1348	0/0:12,0:12:36.12:0,36,540	0/0:16,0:16:48.16:0,48,719	0/0:23,0:23:69.22:0,69,1014	1/1:0,8:8:15.05:195,15,0	0/0:23,0:23:69.23:0,69,1030	0/0:34,0:34:99:0,102,1525	0/0:8,0:8:24.08:0,24,360
chr10	79320021	.	ATT	A	6105	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=5.064;DP=494;FS=3.368;HRun=11;HaplotypeScore=86.3455;InbreedingCoeff=0.9519;MQ=69.38;MQ0=2;MQRankSum=1.382;QD=22.61;ReadPosRankSum=0.600;VQSLOD=4.6543;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:31:72.76:0,73,278	1/1:1,3:4:9.02:96,9,0	0/0:24,0:13:17.86:0,18,191	0/0:19,0:11:4.40:0,4,113	1/1:7,19:27:50.82:520,51,0	0/0:11,0:11:30.09:0,30,440	0/0:23,0:23:30.99:0,31,831	1/1:11,25:36:69.05:774,69,0	0/0:4,0:15:30.40:0,30,113	1/1:2,18:21:56.85:572,57,0	1/1:3,28:31:75.13:798,75,0	0/0:14,0:14:33.11:0,33,503	0/0:14,0:15:41.59:0,42,562	0/0:11,0:11:26.76:0,27,380	1/1:4,12:16:30.07:319,30,0	1/1:2,8:10:18.04:192,18,0	0/0:12,0:13:32.59:0,33,450	1/1:2,12:14:33.08:351,33,0	1/1:6,12:18:39.01:398,39,0	1/1:2,24:26:60.05:624,60,0	1/1:0,4:5:5.97:119,6,0	0/0:13,0:13:36.11:0,36,534	0/0:10,0:10:21.05:0,21,284	0/0:10,0:10:30.10:0,30,462	0/0:1,1:15:18.24:0,18,82	1/1:3,14:17:42.07:436,42,0	1/1:5,27:33:71.89:746,72,0	1/1:5,6:11:15.01:160,15,0
chr10	79321201	.	CG	C	5393.45	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=8.274;DP=631;FS=36.117;HRun=12;HaplotypeScore=116.5999;InbreedingCoeff=0.7810;MQ=69.36;MQ0=0;MQRankSum=0.000;QD=12.31;ReadPosRankSum=8.757;VQSLOD=1.5566;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,29:49:76.68:586,77,0	1/1:0,2:2:2.99:23,3,0	0/0:20,0:20:3.02:0,3,154	0/1:10,0:9:13.20:13,0,42	1/1:10,6:18:30.69:205,31,0	0/0:16,0:16:20.98:0,21,182	0/0:25,0:25:27.45:0,27,237	1/1:19,7:27:22.86:167,23,0	1/1:10,19:29:68.65:528,69,0	1/1:9,6:16:25.77:191,26,0	1/1:14,10:24:33.73:257,34,0	0/0:17,0:17:11.98:0,12,98	0/0:22,0:22:26.72:0,27,195	0/0:23,0:23:26.71:0,27,201	1/1:9,17:28:60.82:452,61,0	1/1:10,17:29:54.36:405,54,0	0/0:16,0:21:29.99:0,30,277	1/1:3,13:16:38.83:302,39,0	1/1:8,10:19:43.35:315,43,0	1/1:9,9:19:22.91:168,23,0	1/1:22,22:46:81.51:609,82,0	0/0:18,0:18:9:0,9,86	0/1:15,0:15:17.15:17,0,18	0/0:29,1:31:17.88:0,18,342	1/1:5,0:21:26.47:78,26,0	1/1:16,13:29:46.84:354,47,0	1/1:9,18:27:68.73:534,69,0	1/1:6,7:14:25.92:189,26,0
chr10	79321732	.	A	AT	8531.16	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-14.535;DP=559;FS=11.164;HRun=8;HaplotypeScore=53.2243;InbreedingCoeff=0.9978;MQ=84.23;MQ0=0;MQRankSum=-0.455;QD=28.44;ReadPosRankSum=2.561;VQSLOD=4.7766;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.03:0,51,466	1/1:1,6:7:18.05:208,18,0	0/0:15,0:15:31.81:0,32,278	0/0:20,0:20:27.71:0,28,392	1/1:3,23:26:44.74:759,45,0	0/0:20,0:20:54.02:0,54,493	0/0:20,0:20:51.02:0,51,467	1/1:6,29:35:90.25:1025,90,0	0/0:21,0:21:45.01:0,45,411	1/1:3,23:26:69.18:784,69,0	1/1:4,21:25:60.14:678,60,0	0/0:19,0:19:48.02:0,48,439	0/0:14,0:14:27.01:0,27,247	0/0:13,0:13:36.01:0,36,325	1/1:5,23:28:66.18:750,66,0	1/1:1,17:18:48.14:554,48,0	0/0:23,0:23:57.01:0,57,517	1/1:1,6:7:21.06:237,21,0	1/1:6,13:19:39.07:435,39,0	1/1:4,25:29:78.23:899,78,0	1/1:1,16:18:41.96:465,42,0	0/0:14,0:14:38.98:0,39,347	0/0:16,0:16:42.02:0,42,384	0/0:23,0:22:56.96:0,57,508	0/0:22,0:22:54.02:0,54,494	1/1:1,17:18:51.15:589,51,0	1/1:5,28:33:50.66:838,51,0	1/1:0,11:11:27.08:312,27,0
chr10	79322482	.	G	GCT	484.19	PASS	AB=0.925;AC=15;AF=0.300;AN=50;BaseQRankSum=-1.105;DP=544;FS=19.905;HRun=0;HaplotypeScore=96.1344;InbreedingCoeff=0.2038;MQ=65.33;MQ0=17;MQRankSum=1.851;QD=2.05;ReadPosRankSum=-1.713;VQSLOD=0.4751;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:24:13.93:14,0,18	0/1:8,0:7:0:0,0,0	./.	./.	1/1:23,0:23:2.16:10,2,0	0/1:21,0:21:5.93:33,0,6	1/1:18,0:19:0.80:75,1,0	./.	0/0:6,0:8:5.49:0,5,27	0/0:34,0:33:9.12:0,9,80	0/0:18,0:18:2.83:0,3,32	0/0:10,0:10:8.51:0,9,49	0/0:15,0:15:4.79:0,5,17	0/0:21,0:21:14.10:0,14,75	0/0:13,0:13:3.01:0,3,30	0/0:11,0:11:8.93:0,9,65	1/1:26,0:27:15.29:184,15,0	0/0:11,0:11:8.02:0,8,50	0/0:17,0:16:3.01:0,3,32	0/0:19,0:19:7.97:0,8,49	0/0:21,0:21:13.04:0,13,82	1/1:19,0:17:2.71:12,3,0	0/1:12,4:14:26.22:30,0,26	0/1:16,14:31:87.60:112,0,88	0/1:25,0:25:0:0,0,0	0/1:23,0:21:8.23:148,0,8	0/0:16,0:16:17.28:0,17,154	0/0:14,0:14:11.57:0,12,81
chr10	79322541	.	CTG	C	6547.17	PASS	AB=0.935;AC=41;AF=0.732;AN=56;BaseQRankSum=8.489;DP=572;FS=11.266;HRun=0;HaplotypeScore=83.4482;InbreedingCoeff=0.8643;MQ=53.04;MQ0=41;MQRankSum=-0.885;QD=16.45;ReadPosRankSum=1.054;VQSLOD=4.0666;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,16:23:26.88:311,27,0	1/1:2,13:12:14.89:186,15,0	0/1:27,2:15:54.68:55,0,403	0/0:32,0:12:18.94:0,19,284	1/1:2,15:16:35.90:418,36,0	0/0:13,0:13:26.52:0,27,345	0/0:25,0:25:26.02:0,26,947	1/1:7,22:27:69.13:834,69,0	1/1:5,14:18:30.09:370,30,0	1/1:4,15:17:36.11:443,36,0	1/1:2,12:13:24.08:298,24,0	1/1:5,18:22:51.16:626,51,0	1/1:5,13:18:33.10:409,33,0	1/1:5,13:17:33.10:409,33,0	1/1:2,18:18:12.02:149,12,0	1/1:4,17:18:21.06:258,21,0	0/0:28,0:27:54.14:0,54,856	1/1:2,3:4:6.02:74,6,0	1/1:9,6:12:9.03:111,9,0	1/1:3,15:18:30.06:370,30,0	1/1:6,20:24:18.06:223,18,0	0/0:21,0:21:48.03:0,48,785	0/0:19,0:19:42.14:0,42,685	0/0:36,0:36:58.15:0,58,1022	1/1:1,10:11:15.05:186,15,0	1/1:6,14:17:32.91:369,33,0	1/1:5,18:21:21.01:260,21,0	1/1:5,9:10:15.05:186,15,0
chr10	79323621	.	T	TAATG	28336.63	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-15.255;DP=705;FS=3.381;HRun=0;HaplotypeScore=95.5700;InbreedingCoeff=0.9993;MQ=79.39;MQ0=3;MQRankSum=-3.327;QD=62.97;ReadPosRankSum=0.199;VQSLOD=6.7462;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,30:39:72.25:1920,72,0	1/1:1,12:15:33.11:880,33,0	0/0:18,0:18:42.14:0,42,757	0/0:23,0:23:63.17:0,63,1069	1/1:3,29:31:84.25:2038,84,0	0/0:20,0:20:60.19:0,60,1074	0/0:27,0:27:75.24:0,75,1310	1/1:8,23:33:93.29:2198,93,0	1/1:3,27:32:84.29:2237,84,0	1/1:1,33:35:99:2639,102,0	1/1:4,17:22:54.14:1379,54,0	0/0:25,0:25:69.20:0,69,1209	0/0:30,0:30:90.31:0,90,1672	0/0:28,0:28:84.27:0,84,1528	1/1:4,23:26:69.19:1691,69,0	1/1:2,19:21:57.20:1494,57,0	0/0:23,0:23:66.21:0,66,1184	1/1:1,15:16:39.52:920,40,0	1/1:8,16:24:63.22:1536,63,0	1/1:2,28:29:84:1876,84,0	1/1:6,24:30:54.19:1399,54,0	0/0:18,0:18:54.19:0,54,1008	0/0:20,0:20:60.19:0,60,1073	0/0:23,0:23:66.23:0,66,1224	1/1:4,11:15:33.11:858,33,0	1/1:4,24:28:78.27:2032,78,0	1/1:3,38:40:99:2722,105,0	1/1:1,6:7:21.07:517,21,0
chr10	79323899	.	TAAA	T	5482.60	PASS	AB=0.573;AC=28;AF=0.500;AN=56;BaseQRankSum=4.614;DP=558;FS=3.509;HRun=15;HaplotypeScore=89.5811;InbreedingCoeff=0.8151;MQ=75.22;MQ0=0;MQRankSum=-1.604;QD=18.03;ReadPosRankSum=4.610;VQSLOD=4.2378;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:21:18.95:0,19,268	1/1:0,8:9:10.39:132,10,0	0/0:19,0:18:9.02:0,9,238	0/0:14,0:12:6:0,6,114	1/1:5,24:32:35.28:429,35,0	0/0:20,0:22:63.16:0,63,954	0/0:16,0:18:45.12:0,45,691	1/1:5,18:26:55.40:596,55,0	0/0:10,0:15:15.05:0,15,217	1/1:9,16:25:41.87:460,42,0	1/1:2,15:19:28.65:304,29,0	0/0:5,0:17:26.92:0,27,222	0/0:6,0:16:20.72:0,21,143	0/0:7,0:15:22.20:0,22,186	0/1:6,15:23:4.27:287,0,4	0/1:4,11:16:22.91:257,0,23	0/0:30,0:33:90.23:0,90,1371	1/1:2,14:20:35.76:340,36,0	1/1:6,13:20:38.92:406,39,0	1/1:5,26:32:68.90:757,69,0	1/1:7,14:21:31.08:366,31,0	0/0:22,0:24:54.14:0,54,890	0/0:12,0:13:27.06:0,27,404	0/0:21,0:25:60.16:0,60,942	1/1:2,15:17:39.01:423,39,0	1/1:6,11:17:26.84:302,27,0	1/1:4,14:20:38.72:391,39,0	1/1:2,3:6:1.70:31,2,0
chr10	79324115	.	G	GT	8158.88	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-8.747;DP=525;FS=0.000;HRun=9;HaplotypeScore=59.9044;InbreedingCoeff=0.8703;MQ=70.34;MQ0=0;MQRankSum=-1.117;QD=22.54;ReadPosRankSum=0.567;VQSLOD=5.5047;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,2:27:45.78:259,46,0	1/1:0,10:10:27.07:299,27,0	0/1:7,0:7:11.42:11,0,75	0/0:13,0:13:6.98:0,7,94	1/1:3,24:27:69.08:733,69,0	0/0:19,0:19:56.35:0,56,474	0/0:12,0:13:29:0,29,237	1/1:10,16:26:30.19:517,30,0	1/1:2,0:18:39.77:199,40,0	1/1:5,20:26:65.99:695,66,0	1/1:2,30:33:83.89:866,84,0	0/0:10,0:10:29.99:0,30,260	0/0:20,0:20:53.97:0,54,469	0/0:16,0:16:41.96:0,42,361	1/1:2,11:13:7.03:306,7,0	1/1:3,12:16:32.92:346,33,0	0/0:26,0:26:68.90:0,69,584	1/1:4,18:22:39.11:431,39,0	1/1:3,10:13:30.05:313,30,0	1/1:4,20:24:54.05:569,54,0	1/1:2,9:11:1.02:239,1,0	0/0:19,0:19:50.93:0,51,436	0/0:17,0:17:41.99:0,42,364	0/0:10,0:10:23.94:0,24,195	1/1:2,22:23:54.15:597,54,0	1/1:1,21:22:63.17:696,63,0	1/1:5,25:30:46.14:736,46,0	1/1:3,10:13:32.96:347,33,0
chr10	79325049	.	T	TTTTA	2121.14	PASS	AC=34;AF=0.773;AN=44;BaseQRankSum=3.481;DP=262;FS=9.369;HRun=0;HaplotypeScore=67.5416;InbreedingCoeff=0.5671;MQ=70.65;MQ0=1;MQRankSum=-2.068;QD=11.11;ReadPosRankSum=-0.966;VQSLOD=1.6030;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:10:15.04:237,15,0	./.	./.	./.	1/1:7,3:10:9.03:213,9,0	0/0:13,0:14:15.04:0,15,215	0/0:3,0:3:3.01:0,3,47	1/1:38,0:38:9.01:89,9,0	1/1:4,0:7:6.02:104,6,0	1/1:4,2:6:9.03:186,9,0	1/1:8,4:12:12.04:266,12,0	1/1:4,5:9:9.03:213,9,0	./.	1/1:3,0:4:6.02:122,6,0	1/1:7,3:11:3.01:71,3,0	1/1:4,1:5:3.01:71,3,0	0/0:20,0:20:39.12:0,39,587	1/1:12,0:14:9.02:152,9,0	1/1:13,0:15:9.92:155,10,0	1/1:9,0:9:3.01:35,3,0	./.	./.	0/0:6,0:6:9.03:0,9,141	0/0:3,0:3:6.02:0,6,94	1/1:8,1:10:6.02:123,6,0	1/1:4,0:6:3.01:52,3,0	1/1:9,0:12:6.02:104,6,0	1/1:8,1:12:3.01:71,3,0
chr10	79327818	.	AG	A	2625.18	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.817;DP=584;FS=8.314;HRun=9;HaplotypeScore=64.7328;InbreedingCoeff=0.9564;MQ=61.87;MQ0=5;MQRankSum=1.899;QD=19.30;ReadPosRankSum=3.159;VQSLOD=4.0542;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,35:41:55.43:761,55,0	0/0:2,0:2:0.47:0,0,1	0/0:27,0:19:37.62:0,38,418	0/0:15,1:12:26.91:0,27,264	0/0:20,0:20:36.11:0,36,415	0/0:17,0:16:33.09:0,33,372	0/0:24,0:24:66.17:0,66,742	0/0:23,0:19:30.03:0,30,307	1/1:2,19:21:51.03:467,51,0	0/0:30,0:30:57.14:0,57,633	0/0:11,0:11:27.06:0,27,295	1/1:1,16:17:36.02:329,36,0	1/1:1,21:22:59.93:549,60,0	1/1:2,18:20:42.02:384,42,0	0/0:24,0:24:60.18:0,60,693	0/0:13,0:13:21.06:0,21,242	0/0:28,0:28:69.18:0,69,773	0/0:20,1:21:17.02:0,17,411	0/0:21,0:19:44.96:0,45,493	0/0:22,0:22:48.11:0,48,527	0/0:41,0:41:99:0,108,1246	0/0:20,0:20:51.10:0,51,548	0/0:10,0:10:21.03:0,21,228	0/0:33,0:33:96.26:0,96,1089	1/1:2,13:15:35.95:320,36,0	0/0:18,1:19:12.11:0,12,381	0/0:15,0:15:39.10:0,39,441	0/0:9,0:9:21.06:0,21,242
chr10	79328723	.	CAAGTA	C	14595.63	PASS	AB=0.667;AC=37;AF=0.685;AN=54;BaseQRankSum=9.733;DP=409;FS=38.728;HRun=0;HaplotypeScore=101.6318;InbreedingCoeff=0.9010;MQ=54.16;MQ0=1;MQRankSum=-11.632;QD=49.14;ReadPosRankSum=1.676;VQSLOD=3.1352;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:57.20:1159,57,0	1/1:0,9:9:27.09:545,27,0	0/0:17,0:16:42.09:0,42,1112	0/0:9,0:8:10.01:0,10,274	1/1:5,16:21:48.16:970,48,0	0/0:11,0:11:30.10:0,30,916	0/0:16,0:16:39.13:0,39,1087	1/1:8,12:20:36.08:579,36,0	1/1:1,12:13:30.10:615,30,0	1/1:3,18:19:51.16:1008,51,0	1/1:4,14:18:39.13:799,39,0	1/1:2,12:14:33.11:677,33,0	1/1:1,10:11:30.10:615,30,0	1/1:0,14:14:39.13:799,39,0	1/1:2,9:11:27.09:553,27,0	1/1:0,11:11:33.11:676,33,0	0/0:28,0:28:81.26:0,81,2286	0/1:3,3:5:82.56:114,0,83	1/1:2,9:11:27.09:554,27,0	1/1:2,18:20:57.20:1156,57,0	./.	0/0:7,0:7:18.06:0,18,533	0/0:18,0:18:51.17:0,51,1438	0/0:5,0:5:15.05:0,15,458	1/1:1,17:18:51.17:1046,51,0	1/1:3,24:26:63.20:1255,63,0	1/1:2,16:17:42.14:861,42,0	1/1:0,10:10:30.10:615,30,0
chr10	79328745	.	G	GA	3857.03	PASS	AB=0.711;AC=26;AF=0.464;AN=56;BaseQRankSum=4.085;DP=443;FS=11.402;HRun=11;HaplotypeScore=114.6626;InbreedingCoeff=0.5324;MQ=55.67;MQ0=0;MQRankSum=-8.660;QD=14.78;ReadPosRankSum=0.144;VQSLOD=2.6685;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:50.29:0,50,394	0/1:4,5:9:5.19:134,0,5	0/0:12,0:13:29.67:0,30,206	0/0:10,0:11:0.37:0,0,112	1/1:11,13:24:34.41:331,34,0	0/0:15,0:15:32.84:0,33,253	0/0:13,0:13:32.83:0,33,252	0/1:7,5:13:25.37:115,0,25	0/0:13,0:13:20.88:0,21,162	1/1:13,11:23:9.67:264,10,0	1/1:5,13:18:1.64:378,2,0	0/1:11,1:12:3.54:4,0,159	0/0:13,0:14:37.88:0,38,282	0/0:15,0:15:32.84:0,33,255	1/1:3,12:15:27.05:274,27,0	1/1:4,12:16:12.85:311,13,0	0/0:23,1:25:37.31:0,37,463	0/1:3,2:4:9.30:52,0,9	0/1:9,6:15:22.43:158,0,22	1/1:8,13:21:18.81:361,19,0	1/1:0,2:3:8.85:75,9,0	0/0:9,0:9:23.89:0,24,186	0/0:14,0:15:37.89:0,38,285	0/0:9,0:9:23.89:0,24,186	0/1:6,14:20:15.65:386,0,16	1/1:18,12:29:27.77:434,28,0	1/1:5,13:17:33.07:335,33,0	1/1:4,13:17:24.52:245,25,0
chr10	79331538	.	TA	T	5683.79	PASS	AB=0.548;AC=27;AF=0.482;AN=56;BaseQRankSum=12.637;DP=536;FS=6.831;HRun=10;HaplotypeScore=75.8697;InbreedingCoeff=0.9126;MQ=74.71;MQ0=0;MQRankSum=0.080;QD=21.21;ReadPosRankSum=-0.718;VQSLOD=5.4169;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:30:51.30:0,51,274	1/1:0,5:5:12:104,12,0	0/0:13,1:13:13.83:0,14,127	0/0:16,0:14:15.02:0,15,160	1/1:3,18:21:53.95:461,54,0	0/0:24,0:24:72.18:0,72,788	0/0:18,0:18:45.12:0,45,498	1/1:3,30:33:89.96:777,90,0	0/0:0,0:11:25.60:0,26,128	1/1:1,20:21:59.98:517,60,0	1/1:3,20:23:56.97:495,57,0	0/0:17,0:17:45.11:0,45,490	0/0:17,0:17:51.11:0,51,547	0/0:14,0:14:42.11:0,42,465	1/1:3,15:18:35.99:312,36,0	1/1:1,15:16:38.99:339,39,0	0/0:24,0:24:63.15:0,63,680	1/1:2,15:17:35.99:312,36,0	1/1:5,13:18:8.78:300,9,0	1/1:3,22:25:65.98:573,66,0	0/1:3,14:17:15.16:317,0,15	0/0:21,0:21:34.86:0,35,604	0/0:21,0:21:54.15:0,54,597	0/0:19,0:19:51.11:0,51,553	0/0:20,1:22:39.93:0,40,630	1/1:1,20:22:62.02:526,62,0	1/1:3,17:20:41.98:364,42,0	1/1:0,12:12:32.99:286,33,0
chr10	79334293	.	C	CATT	1258.01	PASS	AB=0.667;AC=31;AF=0.738;AN=42;BaseQRankSum=0.702;DP=201;FS=0.000;HRun=0;HaplotypeScore=30.7937;InbreedingCoeff=0.3902;MQ=57.99;MQ0=4;MQRankSum=-1.655;QD=9.12;ReadPosRankSum=-2.274;VQSLOD=2.0258;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:8:6.84:0,7,44	1/1:4,0:4:5.93:44,6,0	./.	./.	1/1:3,0:5:3.01:36,3,0	1/1:2,2:4:3.01:58,3,0	1/1:1,1:2:3.01:58,3,0	1/1:37,0:36:20.91:182,21,0	0/0:2,0:5:2.98:0,3,21	1/1:6,0:6:9.02:112,9,0	1/1:6,0:6:2.98:22,3,0	0/0:4,0:4:6.02:0,6,79	0/0:6,0:6:12.04:0,12,158	0/0:4,0:4:3.01:0,3,40	1/1:4,0:6:5.99:58,6,0	1/1:2,0:3:3.01:39,3,0	1/1:7,8:15:21.07:403,21,0	./.	./.	1/1:3,0:3:3.01:40,3,0	./.	./.	./.	0/1:1,1:2:33.59:52,0,34	1/1:7,0:10:12.04:151,12,0	1/1:9,0:9:3.01:39,3,0	1/1:8,0:9:3.01:39,3,0	1/1:11,0:17:5.98:59,6,0
chr10	79335429	.	GCTCT	G	968.40	PASS	AB=0.826;AC=22;AF=0.407;AN=54;BaseQRankSum=0.523;DP=708;FS=37.267;HRun=0;HaplotypeScore=130.8846;InbreedingCoeff=0.3790;MQ=73.37;MQ0=29;MQRankSum=-0.309;QD=3.50;ReadPosRankSum=3.727;VQSLOD=0.6512;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:21.92:0,22,284	0/0:16,0:15:3.37:0,3,17	0/0:67,0:32:2.13:0,2,5	0/0:77,0:27:0:0,0,0	1/1:15,5:19:12:160,12,0	0/0:32,0:34:23.82:0,24,408	0/0:26,0:30:26.22:0,26,413	0/0:30,0:30:3.01:0,3,35	./.	1/1:18,6:24:13.18:175,13,0	1/1:20,5:25:3.48:48,3,0	0/0:14,0:14:3.35:0,3,39	0/0:19,0:26:3.01:0,3,168	0/0:9,0:14:3.01:0,3,53	1/1:20,1:23:8.97:93,9,0	1/1:19,8:28:2.61:213,3,0	0/0:19,0:21:30.10:0,30,498	0/1:7,6:11:20.88:41,0,21	1/1:18,1:18:4.33:90,4,0	1/1:16,6:22:5.84:41,6,0	1/1:13,1:14:9.03:127,9,0	0/0:15,0:15:17.95:0,18,334	0/0:15,1:18:17.78:0,18,283	0/1:32,0:32:6.68:7,0,518	0/0:23,0:23:3.01:0,3,50	0/1:14,0:20:15.27:15,0,176	1/1:12,8:19:3.01:46,3,0	0/1:14,2:13:21.51:79,0,22
chr10	79335947	.	CTT	C	18477.07	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=16.765;DP=654;FS=8.742;HRun=3;HaplotypeScore=123.5648;InbreedingCoeff=0.9943;MQ=79.54;MQ0=0;MQRankSum=-5.248;QD=40.17;ReadPosRankSum=1.937;VQSLOD=3.7887;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,50:51:99:1872,123,0	1/1:0,9:9:24.08:367,24,0	0/0:17,0:17:48.11:0,48,818	0/0:18,0:18:48.12:0,48,845	1/1:1,21:22:54.18:825,54,0	0/0:21,0:21:63.21:0,63,1186	0/0:35,0:35:99:0,102,1951	1/1:2,20:22:57.15:808,57,0	1/1:0,22:22:63.21:954,63,0	1/1:0,20:21:63.01:884,63,0	1/1:0,10:10:27.09:402,27,0	1/1:0,20:20:60.20:918,60,0	1/1:0,29:29:81.27:1231,81,0	1/1:1,31:32:84.28:1275,84,0	1/1:1,38:39:99:1478,99,0	1/1:0,19:19:54.18:809,54,0	0/0:37,0:37:99:0,111,2112	1/1:2,16:18:48.16:734,48,0	1/1:3,17:20:51.17:777,51,0	1/1:0,15:15:45.15:679,45,0	1/1:2,28:30:78.26:1193,78,0	0/0:17,0:17:51.13:0,51,947	0/0:17,0:17:45.15:0,45,870	0/0:32,0:32:96.32:0,96,1816	1/1:3,22:25:66.21:977,66,0	1/1:3,21:24:63.21:963,63,0	1/1:1,27:28:75.25:1148,75,0	1/1:0,4:4:12.04:184,12,0
chr10	79338049	.	GA	G	7691.98	PASS	AB=0.857;AC=31;AF=0.554;AN=56;BaseQRankSum=9.611;DP=557;FS=6.783;HRun=10;HaplotypeScore=113.4518;InbreedingCoeff=0.9046;MQ=61.63;MQ0=0;MQRankSum=0.031;QD=21.73;ReadPosRankSum=-0.746;VQSLOD=4.0480;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.18:0,72,788	1/1:0,10:10:26.99:234,27,0	0/0:13,0:10:18:0,18,173	0/0:7,0:4:4.56:0,5,34	1/1:3,24:27:65.96:573,66,0	0/0:23,0:24:72.03:0,72,777	0/0:5,0:5:12.03:0,12,133	1/1:4,40:44:99:1042,120,0	0/0:20,0:20:57.15:0,57,631	1/1:1,28:29:83.98:729,84,0	1/1:2,21:23:59.98:521,60,0	0/0:19,0:19:51.10:0,51,546	0/0:23,0:23:66.17:0,66,722	0/0:11,0:11:30.07:0,30,325	1/1:1,14:15:35.99:312,36,0	1/1:2,13:15:35.99:313,36,0	0/0:29,0:30:78.04:0,78,844	1/1:5,25:30:71.92:618,72,0	1/1:2,20:22:59.99:521,60,0	1/1:3,19:22:50.96:443,51,0	1/1:0,6:6:18:156,18,0	0/0:11,0:11:30.08:0,30,332	0/0:13,0:13:33.07:0,33,356	0/1:5,1:6:14.02:14,0,88	1/1:5,25:30:62.97:547,63,0	1/1:3,27:30:80.96:699,81,0	1/1:2,24:26:65.98:573,66,0	1/1:3,16:19:31.39:397,31,0
chr10	79342358	.	AT	A	2349.54	PASS	AB=0.739;AC=12;AF=0.214;AN=56;BaseQRankSum=10.589;DP=567;FS=0.000;HRun=10;HaplotypeScore=58.3882;InbreedingCoeff=0.8042;MQ=82.11;MQ0=0;MQRankSum=-3.039;QD=17.53;ReadPosRankSum=1.796;VQSLOD=4.1467;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:17:46.53:396,47,0	0/0:4,0:4:9.02:0,9,100	0/0:25,0:25:18.34:0,18,348	0/0:20,0:20:31.92:0,32,300	0/0:23,0:23:63.59:0,64,684	0/0:41,0:42:99:0,108,1176	0/0:11,0:12:35.89:0,36,366	0/0:22,0:23:66.01:0,66,711	0/1:5,9:14:3.21:204,0,3	0/0:30,0:30:84.23:0,84,929	0/0:26,0:27:69.91:0,70,746	1/1:1,12:13:32.99:287,33,0	1/1:1,18:19:50.99:443,51,0	1/1:1,24:25:68.98:599,69,0	0/0:19,1:20:18.93:0,19,405	0/0:15,1:16:22.06:0,22,465	0/0:16,1:17:16.06:0,16,405	0/0:14,0:14:42.11:0,42,463	0/1:17,3:19:29.76:30,0,376	0/0:27,1:28:46.25:0,46,737	0/0:11,0:12:29.91:0,30,313	0/0:22,1:23:30.93:0,31,553	0/0:27,1:28:46.14:0,46,737	0/0:16,0:16:42.97:0,43,444	1/1:3,23:26:65.98:573,66,0	0/0:25,0:25:60.16:0,60,663	0/0:23,0:23:63.15:0,63,681	0/0:5,0:5:12.03:0,12,133
chr10	79346160	.	T	TAAA	2943.24	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-0.372;DP=585;FS=26.691;HRun=11;HaplotypeScore=90.7214;InbreedingCoeff=0.9849;MQ=70.43;MQ0=1;MQRankSum=-2.161;QD=23.18;ReadPosRankSum=0.215;VQSLOD=0.3614;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,27:39:42.91:605,43,0	0/0:11,0:12:22.54:0,23,278	0/0:19,0:16:19.86:0,20,195	0/0:16,0:15:12.82:0,13,166	0/0:31,0:33:69.08:0,69,805	0/0:22,0:22:57.09:0,57,621	0/0:21,0:22:60.05:0,60,669	0/0:23,0:25:62.90:0,63,660	1/1:3,10:16:23.68:389,24,0	0/0:28,0:28:66.07:0,66,770	0/0:18,0:18:48.12:0,48,561	1/1:5,17:23:33.09:573,33,0	1/1:6,17:26:47.72:776,48,0	1/1:3,20:23:42.14:774,42,0	0/0:22,0:24:56.96:0,57,619	0/0:23,0:26:60.15:0,60,711	0/0:18,0:21:27.89:0,28,486	0/0:19,0:19:45.05:0,45,524	0/0:12,0:13:13.13:0,13,223	0/0:19,0:19:38.90:0,39,445	0/0:14,0:16:38.91:0,39,410	0/0:17,0:17:38.82:0,39,432	0/0:14,0:16:24.08:0,24,300	0/0:17,0:17:48.10:0,48,543	0/0:15,0:15:36.06:0,36,420	0/0:22,0:22:51.03:0,51,596	0/0:29,0:29:78.16:0,78,908	0/0:9,0:9:27.08:0,27,316
chr10	79346764	.	G	GA	11590.74	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-12.434;DP=599;FS=1.189;HRun=9;HaplotypeScore=53.4857;InbreedingCoeff=0.9561;MQ=70.56;MQ0=0;MQRankSum=-0.325;QD=26.40;ReadPosRankSum=0.035;VQSLOD=5.2508;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:7.04:306,7,0	1/1:0,11:11:30.08:332,30,0	0/0:8,0:8:8.98:0,9,74	0/0:6,0:6:5.95:0,6,45	1/1:3,28:33:89.79:917,90,0	0/0:30,0:30:74.96:0,75,647	0/0:18,0:18:50.99:0,51,443	1/1:2,29:31:87.24:962,87,0	1/1:3,16:19:51.13:557,51,0	1/1:4,23:29:78.04:838,78,0	1/1:3,24:27:69.19:763,69,0	1/1:1,21:22:60.16:664,60,0	1/1:4,21:25:67.42:732,67,0	1/1:1,9:10:27.07:299,27,0	1/1:5,19:24:25.09:505,25,0	1/1:0,18:18:45.12:498,45,0	0/0:22,0:22:50.96:0,51,442	1/1:3,15:18:19.07:439,19,0	1/1:9,14:23:39.11:431,39,0	1/1:8,22:31:45.97:718,46,0	1/1:3,16:19:45.12:498,45,0	0/0:22,0:22:53.99:0,54,469	0/0:32,0:32:83.98:0,84,729	0/0:22,0:22:53.94:0,54,460	1/1:0,17:17:33.09:365,33,0	1/1:2,18:20:51.12:553,51,0	1/1:7,18:26:59.48:617,59,0	1/1:1,18:19:54.15:597,54,0
chr10	79347735	.	G	GGT	2921.19	PASS	AB=0.563;AC=17;AF=0.304;AN=56;BaseQRankSum=14.821;DP=536;FS=10.196;HRun=0;HaplotypeScore=81.9654;InbreedingCoeff=0.1256;MQ=67.61;MQ0=0;MQRankSum=-0.688;QD=10.07;ReadPosRankSum=3.009;VQSLOD=2.5067;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:78.26:0,78,1225	1/1:1,0:11:7.87:178,8,0	0/0:14,0:11:4.85:0,5,265	0/0:8,0:6:14.35:0,14,124	0/1:10,1:31:99:296,0,147	0/0:17,0:17:48.14:0,48,726	0/0:14,0:15:41.31:0,41,565	0/1:7,0:29:75.83:273,0,76	0/0:17,0:17:48.16:0,48,772	0/1:4,0:26:51.80:265,0,52	1/1:3,0:19:24.41:259,24,0	0/0:12,0:12:36.11:0,36,537	0/0:16,0:17:50.38:0,50,779	0/0:15,0:16:48.16:0,48,748	0/1:3,0:19:1.19:232,0,1	1/1:3,0:17:26.60:264,27,0	0/0:24,0:24:66.15:0,66,964	0/1:4,0:21:20.06:200,0,20	0/1:4,0:16:72.94:135,0,73	0/1:11,0:25:78.60:260,0,79	0/1:1,0:11:3.11:91,0,3	0/0:13,0:13:39.10:0,39,578	0/0:22,0:22:55.11:0,55,868	0/0:15,0:15:42.06:0,42,620	0/0:28,0:28:81.26:0,81,1239	0/1:3,0:20:26.91:222,0,27	0/1:8,1:33:88.08:313,0,88	0/1:2,0:11:23.51:108,0,24
chr10	79351645	.	CT	C	1596.67	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.937;DP=476;FS=1.314;HRun=1;HaplotypeScore=43.6910;InbreedingCoeff=0.9896;MQ=83.25;MQ0=0;MQRankSum=-4.809;QD=33.97;ReadPosRankSum=-0.365;VQSLOD=3.1088;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:69.23:963,69,0	0/0:9,0:9:27.08:0,27,409	0/0:22,0:22:26.14:0,26,824	0/0:12,0:12:36.12:0,36,549	0/0:17,0:17:48.16:0,48,767	0/0:19,0:19:57.19:0,57,906	0/0:25,0:25:75.22:0,75,1152	0/0:24,0:24:72.22:0,72,1087	1/1:0,22:22:54.18:755,54,0	0/0:17,0:17:51.17:0,51,794	0/0:16,0:16:48.16:0,48,767	0/0:9,0:9:27.09:0,27,432	0/0:15,0:15:45.15:0,45,719	0/0:22,0:22:66.20:0,66,1009	0/0:14,0:14:42.14:0,42,670	0/0:21,0:21:63.21:0,63,1007	0/0:11,0:11:33.09:0,33,502	0/0:19,0:19:57.14:0,57,839	0/0:22,0:22:66.23:0,66,1055	0/0:24,0:24:72.23:0,72,1126	0/0:10,0:9:30.10:0,30,480	0/0:13,0:13:39.13:0,39,623	0/0:14,0:14:42.13:0,42,646	0/0:12,0:12:36.12:0,36,571	0/0:14,0:14:42.14:0,42,671	0/0:18,0:18:54.18:0,54,838	0/0:23,0:23:69.20:0,69,1055	0/0:7,0:7:15.05:0,15,240
chr10	79354121	.	CGTGTGTGTGT	C	3490.16	PASS	AB=0.809;AC=23;AF=0.442;AN=52;BaseQRankSum=5.025;DP=646;FS=7.242;HRun=0;HaplotypeScore=196.7750;InbreedingCoeff=0.2577;MQ=68.23;MQ0=10;MQRankSum=-4.463;QD=8.93;ReadPosRankSum=1.520;VQSLOD=2.0774;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,3:39:18.01:309,0,18	./.	./.	0/0:41,0:31:3.01:0,3,41	1/1:17,1:18:1.82:5,2,0	0/0:18,0:17:14.26:0,14,428	0/0:17,0:20:36.04:0,36,1154	0/0:31,0:29:6.99:0,7,18	1/1:8,17:26:23.70:566,24,0	1/1:14,10:24:9.01:368,9,0	0/0:10,0:10:0:0,0,0	0/1:21,6:31:24.30:232,0,24	0/1:23,0:29:60.91:165,0,61	0/1:21,0:23:41.97:42,0,110	0/1:15,15:32:5.19:306,0,5	1/1:8,14:23:21.75:535,22,0	0/0:16,0:21:37.68:0,38,1078	1/1:10,11:21:3.01:89,3,0	0/0:11,0:10:4.40:0,4,19	1/1:8,4:13:3.90:89,4,0	0/1:29,16:44:31.76:32,0,53	0/0:21,0:19:10.76:0,11,396	0/0:14,0:14:11.89:0,12,207	0/0:25,0:30:54.18:0,54,1993	1/1:13,1:22:9.02:142,9,0	1/1:25,7:32:12.99:338,13,0	0/1:10,1:12:64.55:274,0,65	0/0:5,0:5:2.80:0,3,13
chr10	79355821	.	TACACACACACAC	T	749.90	PASS	AB=0.968;AC=16;AF=0.333;AN=48;BaseQRankSum=-0.382;DP=329;FS=1.404;HRun=0;HaplotypeScore=145.4472;InbreedingCoeff=0.3335;MQ=67.47;MQ0=13;MQRankSum=-3.069;QD=6.30;ReadPosRankSum=0.062;VQSLOD=2.6612;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:15:0,15,328	./.	./.	./.	1/1:11,0:12:2.99:23,3,0	0/0:13,0:13:15.05:0,15,655	0/0:10,0:10:9.03:0,9,261	0/1:27,2:29:77.98:90,0,78	0/0:9,0:9:15.04:0,15,329	0/1:11,0:11:12.86:13,0,47	1/1:7,0:9:9.03:195,9,0	0/0:10,0:10:20.56:0,21,383	0/0:6,0:6:12.04:0,12,399	0/0:8,0:8:9.03:0,9,256	./.	1/1:3,1:4:3.01:101,3,0	0/0:21,0:20:18.06:0,18,880	0/1:8,0:8:36.02:36,0,46	0/0:9,0:8:3:0,3,27	1/1:11,1:12:3.01:54,3,0	1/1:10,0:7:3.01:97,3,0	0/0:9,0:9:6.25:0,6,530	0/0:14,0:14:21.07:0,21,1089	0/0:11,0:11:12.04:0,12,475	0/0:10,0:10:3.01:0,3,147	0/1:14,0:14:14.03:90,0,14	1/1:6,2:8:6.02:200,6,0	0/0:4,0:4:6.02:0,6,104
chr10	79355896	.	A	AGAGG	591.72	PASS	AB=1.000;AC=13;AF=0.250;AN=52;BaseQRankSum=5.984;DP=363;FS=5.355;HRun=0;HaplotypeScore=72.8297;InbreedingCoeff=0.4250;MQ=69.37;MQ0=12;MQRankSum=-0.327;QD=6.96;ReadPosRankSum=0.797;VQSLOD=1.4732;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:20.63:198,21,0	0/1:6,0:6:7.08:7,0,67	0/0:35,0:19:37.11:0,37,481	0/0:35,0:24:27.13:0,27,413	0/0:9,0:8:11.93:0,12,90	0/0:23,0:23:60.02:0,60,757	0/0:11,0:11:26.99:0,27,291	0/0:25,0:23:65.92:0,66,586	./.	0/0:4,0:4:7.33:0,7,52	0/0:14,0:13:14.96:0,15,121	1/1:9,0:10:15.01:197,15,0	1/1:14,0:14:26.21:192,26,0	./.	0/0:9,0:8:16.72:0,17,119	1/1:3,0:3:1.87:23,2,0	0/0:19,0:18:42.01:0,42,640	0/1:6,0:5:28.58:29,0,50	0/0:16,0:14:15.98:0,16,268	0/0:16,0:16:7.80:0,8,197	0/0:7,0:6:5.99:0,6,49	0/0:13,0:13:17.96:0,18,215	0/0:10,0:10:14.23:0,14,175	0/0:3,0:3:6:0,6,86	0/1:6,0:6:4.04:4,0,80	0/1:16,0:16:95.58:96,0,180	0/1:14,0:14:2.05:2,0,116	0/0:14,0:12:35.88:0,36,284
chr10	79357406	.	C	CT	528.42	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.437;DP=533;FS=1.998;HRun=8;HaplotypeScore=48.4475;InbreedingCoeff=0.9449;MQ=75.11;MQ0=0;MQRankSum=-0.323;QD=26.42;ReadPosRankSum=-1.594;VQSLOD=3.7342;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:39.02:0,39,357	0/0:13,0:13:36.01:0,36,325	0/0:10,0:10:11.99:0,12,110	0/0:10,0:10:23.99:0,24,212	0/0:26,0:26:69.03:0,69,631	0/0:21,0:21:57.02:0,57,517	0/0:19,0:19:51.01:0,51,462	0/0:25,0:25:63.02:0,63,577	0/0:16,0:16:42.02:0,42,384	0/0:27,0:27:72.04:0,72,658	0/0:24,0:24:66.01:0,66,597	0/0:21,0:21:57.03:0,57,522	0/0:20,0:20:45.01:0,45,411	0/0:21,0:21:59.95:0,60,531	0/0:19,0:19:45.02:0,45,412	0/0:19,0:19:57.02:0,57,517	0/0:12,0:12:36.02:0,36,329	0/0:23,0:23:63.02:0,63,577	0/0:20,0:20:48:0,48,435	0/0:28,0:28:66.02:0,66,604	0/0:8,0:8:18.01:0,18,165	0/0:6,0:6:14.98:0,15,132	0/0:25,0:25:63.03:0,63,577	0/0:11,0:11:30.02:0,30,274	1/1:2,18:20:54.16:623,54,0	0/0:31,0:31:78.02:0,78,711	0/0:29,0:29:66.03:0,66,604	0/0:11,0:11:33.02:0,33,302
chr10	79358609	.	CTCATGTTTTGGCGG	C	10651.26	PASS	AB=0.967;AC=11;AF=0.196;AN=56;BaseQRankSum=14.365;DP=715;FS=0.876;HRun=0;HaplotypeScore=273.6815;InbreedingCoeff=0.8866;MQ=85.03;MQ0=0;MQRankSum=-14.820;QD=69.62;ReadPosRankSum=3.946;VQSLOD=4.0716;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,18:26:42.14:1718,42,0	0/0:23,0:23:66.23:0,66,4492	0/0:25,0:25:60.04:0,60,2640	0/0:30,0:30:75.23:0,75,4011	0/0:41,0:41:99:0,114,6361	0/0:28,0:28:78.25:0,78,4417	0/0:30,0:30:84.29:0,84,5417	0/0:34,0:34:81.27:0,81,4218	1/1:2,13:15:36.12:1485,36,0	0/0:40,0:40:99:0,102,6236	0/0:25,0:25:66.23:0,66,4068	1/1:2,26:28:60.21:2462,60,0	1/1:3,24:27:66.23:2723,66,0	1/1:5,23:28:54.18:2228,54,0	0/0:31,0:31:87.30:0,87,5729	0/1:28,1:29:36.52:37,0,5367	0/0:29,0:29:81.28:0,81,5142	0/0:11,0:11:33.11:0,33,2168	0/0:22,0:22:57.20:0,57,3237	0/0:23,0:23:66.23:0,66,3969	0/0:30,0:30:84.29:0,84,4867	0/0:14,0:14:36.11:0,36,1867	0/0:18,0:18:51.18:0,51,3156	0/0:20,0:20:54.19:0,54,3573	0/0:20,0:20:57.20:0,57,3819	0/0:30,0:30:81.26:0,81,4845	0/0:29,0:28:81.28:0,81,5345	0/0:9,0:9:27.09:0,27,1807
chr10	79358825	.	GT	G	1436.39	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.893;DP=708;FS=0.439;HRun=11;HaplotypeScore=71.8111;InbreedingCoeff=0.9102;MQ=65.66;MQ0=0;MQRankSum=-1.625;QD=16.51;ReadPosRankSum=1.532;VQSLOD=4.5086;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:32:41.46:0,41,621	0/0:7,0:8:23.88:0,24,229	0/0:21,1:21:10.51:0,11,255	0/0:10,0:9:18.04:0,18,189	0/0:31,1:33:56.92:0,57,774	0/0:26,2:28:47.53:0,48,705	0/0:27,0:29:75:0,75,767	0/0:34,0:34:81.17:0,81,836	0/0:24,0:24:66.10:0,66,678	0/0:32,0:34:71.98:0,72,730	0/0:16,0:16:39.10:0,39,415	1/1:3,25:28:39.96:531,40,0	1/1:7,27:34:74.86:611,75,0	1/1:5,20:25:27.95:436,28,0	0/0:24,3:27:19.87:0,20,609	0/0:29,0:31:74.87:0,75,751	0/0:25,0:25:72.18:0,72,768	0/0:10,1:11:2.38:0,2,219	0/0:19,1:20:14.44:0,14,352	0/0:33,1:34:59.54:0,60,824	0/0:24,0:24:60.14:0,60,633	0/0:19,1:21:26.31:0,26,442	0/0:19,0:19:42.10:0,42,441	0/0:20,0:21:50.96:0,51,526	0/0:29,0:29:66.15:0,66,690	0/0:36,0:36:90.22:0,90,954	0/0:34,0:33:59.58:0,60,839	0/0:18,1:19:32.48:0,32,542
chr10	79362314	.	A	ATTG	23860.23	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-13.927;DP=664;FS=7.297;HRun=0;HaplotypeScore=76.9223;InbreedingCoeff=0.9910;MQ=81.19;MQ0=1;MQRankSum=-4.746;QD=46.78;ReadPosRankSum=1.478;VQSLOD=6.8391;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:20:45.15:937,45,0	1/1:0,5:5:15.05:315,15,0	0/0:26,0:25:47.93:0,48,562	0/0:22,0:22:43.92:0,44,586	1/1:7,30:38:86.97:1556,87,0	0/0:23,0:23:69.20:0,69,1004	0/0:13,0:13:27.07:0,27,378	1/1:13,32:44:99:2045,111,0	1/1:2,15:17:42.14:883,42,0	1/1:6,29:36:93.22:1699,93,0	1/1:2,22:24:66.14:1224,66,0	1/1:4,24:29:57.19:1199,57,0	1/1:3,18:22:45.15:946,45,0	1/1:0,24:24:54.19:1135,54,0	1/1:6,28:34:81.28:1607,81,0	1/1:2,21:23:54.19:1136,54,0	0/0:17,0:17:45.15:0,45,690	1/1:4,18:22:48.09:936,48,0	1/1:6,19:26:66.13:1191,66,0	1/1:2,35:37:99:2075,105,0	1/1:5,9:14:20.96:395,21,0	0/0:20,0:20:54.17:0,54,795	0/0:24,0:24:69.21:0,69,1025	0/0:9,0:9:24.08:0,24,370	1/1:3,17:20:57.19:1172,57,0	1/1:4,31:35:99:1893,99,0	1/1:5,24:32:60.20:1261,60,0	1/1:1,6:7:12.04:252,12,0
chr10	79363607	.	GT	G	4762.45	PASS	AB=0.789;AC=29;AF=0.518;AN=56;BaseQRankSum=8.983;DP=644;FS=4.446;HRun=12;HaplotypeScore=69.6538;InbreedingCoeff=0.7662;MQ=73.55;MQ0=0;MQRankSum=0.598;QD=13.45;ReadPosRankSum=2.477;VQSLOD=5.3460;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:31:35.89:0,36,645	1/1:2,10:12:26.88:209,27,0	0/0:22,1:22:13.23:0,13,233	0/1:13,1:11:21.66:22,0,43	1/1:6,18:24:26.33:387,26,0	0/0:22,0:21:57.07:0,57,569	0/0:24,0:25:56.95:0,57,562	1/1:8,22:31:67.63:506,68,0	0/0:28,0:28:75.06:0,75,721	1/1:6,16:23:53.60:391,54,0	1/1:5,23:28:35.71:417,36,0	0/0:20,0:20:54.07:0,54,522	0/0:30,1:31:48.90:0,49,671	0/1:15,3:19:24.82:25,0,284	1/1:2,23:25:38.84:302,39,0	1/1:5,13:18:26.87:209,27,0	0/0:19,1:20:26.61:0,27,412	1/1:1,10:13:33.96:244,34,0	1/1:4,16:20:14.29:288,14,0	0/1:7,22:29:28.79:341,0,29	1/1:3,14:17:8.94:208,9,0	0/0:22,0:22:57.06:0,57,544	0/0:20,0:20:51.84:0,52,478	0/0:17,0:17:17.65:0,18,323	0/0:29,0:31:45.43:0,45,734	1/1:11,21:34:57.98:443,58,0	1/1:9,32:42:88.64:679,89,0	1/1:1,4:5:11.95:93,12,0
chr10	79364659	.	CTT	C	2299.09	PASS	AB=0.676;AC=28;AF=0.500;AN=56;BaseQRankSum=2.703;DP=482;FS=0.000;HRun=17;HaplotypeScore=63.4073;InbreedingCoeff=0.4536;MQ=70.44;MQ0=0;MQRankSum=0.026;QD=7.05;ReadPosRankSum=5.104;VQSLOD=-0.4827;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,2:24:15.59:16,0,104	0/1:4,3:9:13.84:66,0,14	0/0:24,0:11:17.28:0,17,138	0/0:17,0:10:5.85:0,6,58	1/1:8,16:27:37.14:270,37,0	0/0:18,0:20:46.71:0,47,443	0/0:15,0:15:31.17:0,31,280	1/1:13,14:30:26.46:257,26,0	0/1:6,1:17:0.47:0,0,66	1/1:10,13:24:19.75:231,20,0	1/1:5,11:17:31.08:246,31,0	0/0:8,0:8:5.98:0,6,46	0/1:7,1:16:24.43:24,0,108	0/0:3,0:5:4.87:0,5,17	1/1:5,8:17:14.01:133,14,0	1/1:6,10:18:26.27:189,26,0	0/0:15,1:20:13.11:0,13,303	0/1:5,7:14:7.73:107,0,8	0/1:11,1:13:39.75:40,0,46	0/1:12,11:26:12.87:131,0,13	1/1:3,5:8:14.89:119,15,0	0/0:15,0:16:29.53:0,30,293	0/0:14,0:18:40.64:0,41,352	0/0:13,0:13:23.98:0,24,230	1/1:2,0:13:24.54:104,25,0	1/1:12,15:29:11.70:311,12,0	1/1:7,10:17:26.63:213,27,0	0/1:3,2:6:0.06:39,0,0
chr10	79365556	.	A	ATCTCTG	7498.86	PASS	AB=0.675;AC=35;AF=0.625;AN=56;BaseQRankSum=-0.347;DP=686;FS=3.806;HRun=0;HaplotypeScore=174.7593;InbreedingCoeff=0.8444;MQ=69.50;MQ0=34;MQRankSum=-2.331;QD=16.23;ReadPosRankSum=0.697;VQSLOD=4.5386;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:16:15.02:158,15,0	1/1:9,0:8:3.48:81,3,0	0/0:37,0:29:18.72:0,19,227	0/0:39,0:33:26.40:0,26,373	0/1:14,12:23:0:0,0,0	0/0:21,0:21:24.08:0,24,402	0/0:37,0:38:81.22:0,81,1316	1/1:43,0:42:5.31:611,5,0	1/1:20,0:20:18.05:273,18,0	1/1:6,12:15:33.10:775,33,0	0/1:16,10:21:0:0,0,0	1/1:16,3:19:24.08:554,24,0	1/1:24,1:23:21.07:504,21,0	1/1:20,3:23:21.04:287,21,0	0/1:10,16:25:0:0,0,0	1/1:15,16:28:12.04:391,12,0	0/0:12,0:11:18.06:0,18,318	1/1:22,0:17:21.07:358,21,0	1/1:25,0:19:27.94:605,28,0	1/1:10,11:19:9.03:242,9,0	1/1:36,0:24:9.03:274,9,0	0/0:11,0:11:21.07:0,21,395	0/0:20,0:20:36.12:0,36,647	0/0:27,0:26:66.21:0,66,1194	0/0:19,0:19:22.70:0,23,247	1/1:14,14:26:51.17:1116,51,0	1/1:30,3:31:45.12:1049,45,0	1/1:8,0:6:9.03:221,9,0
chr10	79365580	.	G	GTC	4443.17	PASS	AB=0.850;AC=18;AF=0.321;AN=56;BaseQRankSum=0.078;DP=674;FS=0.430;HRun=0;HaplotypeScore=144.6224;InbreedingCoeff=-0.2835;MQ=51.98;MQ0=49;MQRankSum=0.953;QD=10.78;ReadPosRankSum=5.208;VQSLOD=4.6074;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,6:17:24.03:215,0,24	0/1:7,1:7:43.07:43,0,68	0/0:21,0:15:18.79:0,19,229	0/0:22,0:17:23.85:0,24,370	0/0:26,0:22:11.37:0,11,98	0/0:19,0:18:38.92:0,39,516	0/0:42,0:41:99:0,99,1354	0/1:37,1:33:99:436,0,418	0/1:11,9:20:99:296,0,124	0/1:18,0:14:38.70:345,0,39	0/1:20,0:15:0:0,0,0	0/1:12,8:20:84.52:380,0,85	0/1:13,8:19:99:298,0,203	0/1:17,7:24:93.41:256,0,93	0/0:23,0:22:13.82:0,14,128	0/1:31,0:28:99:112,0,139	0/0:18,0:17:37.79:0,38,477	0/1:17,6:17:77.82:303,0,78	0/1:14,10:15:43.77:340,0,44	0/1:22,0:20:82.48:130,0,82	1/1:23,20:31:6.32:136,6,0	0/0:13,0:12:24.08:0,24,343	0/0:16,0:16:42.14:0,42,601	0/0:33,0:32:93.27:0,93,1291	0/0:29,0:29:24.07:0,24,309	0/1:32,0:28:99:454,0,359	0/1:24,8:30:35.48:651,0,35	0/1:7,4:8:45.33:45,0,57
chr10	79365582	.	CTG	C	1925.12	PASS	AB=0.895;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.316;DP=671;FS=3.739;HRun=0;HaplotypeScore=153.1310;InbreedingCoeff=-0.3358;MQ=51.49;MQ0=50;MQRankSum=2.550;QD=5.35;ReadPosRankSum=-0.049;VQSLOD=2.8622;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,7:16:54.25:95,0,54	0/1:6,1:6:17.26:17,0,141	0/0:17,0:12:18.79:0,19,229	0/0:20,0:16:23.92:0,24,371	0/0:24,2:22:15.04:0,15,233	0/0:20,0:19:41.95:0,42,747	0/0:42,0:41:99:0,99,1695	0/1:27,14:36:99:421,0,820	0/1:20,0:20:12.02:12,0,294	0/1:15,3:14:99:144,0,131	0/0:17,3:15:0:0,0,0	0/1:19,1:20:99:174,0,194	0/1:19,1:18:80.14:80,0,353	0/1:20,4:24:99:231,0,141	0/0:22,1:22:15.05:0,15,243	0/0:31,1:29:38.49:0,38,421	0/0:19,0:18:45.04:0,45,775	0/1:17,5:16:99:258,0,175	0/1:23,2:16:79.53:80,0,164	0/1:19,2:19:7.65:8,0,215	0/1:39,5:31:18.11:18,0,54	0/0:14,0:12:24.08:0,24,427	0/0:15,0:15:42.14:0,42,749	0/0:35,0:33:96.29:0,96,1704	0/0:27,0:27:27.09:0,27,418	0/1:31,0:27:99:237,0,766	0/1:28,5:31:99:286,0,187	0/1:11,0:8:17.96:18,0,123
chr10	79365604	.	G	GTC	2646.93	PASS	AB=0.974;AC=35;AF=0.673;AN=52;BaseQRankSum=7.940;DP=702;FS=0.000;HRun=0;HaplotypeScore=195.6747;InbreedingCoeff=0.5799;MQ=47.16;MQ0=32;MQRankSum=-2.544;QD=5.12;ReadPosRankSum=-1.205;VQSLOD=2.6123;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:17:2.17:0,2,10	1/1:9,0:9:9.15:52,9,0	./.	./.	1/1:31,0:28:0.84:96,1,0	0/0:28,0:27:44.93:0,45,485	0/0:38,0:37:66.76:0,67,611	1/1:41,0:37:41.16:376,41,0	0/1:25,0:25:47.23:59,0,47	1/1:16,0:13:29.04:179,29,0	1/1:24,1:21:8.28:53,8,0	1/1:24,0:24:17.25:77,17,0	1/1:23,0:23:10.02:80,10,0	1/1:31,0:31:18.88:79,19,0	1/1:30,1:31:27.72:214,28,0	1/1:34,1:32:35.35:285,35,0	0/0:22,0:21:27.65:0,28,414	1/1:13,3:14:1.34:78,1,0	1/1:25,0:19:21.78:163,22,0	0/1:22,2:22:2.18:197,0,2	1/1:47,1:38:1.24:131,1,0	0/0:17,0:15:29.67:0,30,268	0/0:15,0:15:26.40:0,26,293	0/0:40,0:38:65.35:0,65,913	1/1:23,2:25:3.38:9,3,0	1/1:38,0:34:31.89:484,32,0	1/1:38,3:38:14.95:166,15,0	0/1:9,0:7:27.89:48,0,28
chr10	79365618	.	CTG	C	832.12	PASS	AB=0.983;AC=8;AF=0.148;AN=54;BaseQRankSum=6.437;DP=720;FS=0.000;HRun=0;HaplotypeScore=186.6580;InbreedingCoeff=0.5738;MQ=49.51;MQ0=21;MQRankSum=-0.141;QD=6.50;ReadPosRankSum=0.886;VQSLOD=3.0918;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:16:14.26:28,0,14	0/0:9,0:9:20.54:0,21,242	./.	0/0:10,0:2:2.96:0,3,20	0/0:32,0:29:57.06:0,57,684	0/0:24,2:26:8.12:0,8,639	0/0:36,0:35:1.91:0,2,388	0/0:39,0:37:53.55:0,54,451	0/1:28,0:29:46.20:46,0,111	0/0:16,0:14:27.05:0,27,320	0/0:20,0:19:32.98:0,33,381	1/1:15,11:26:35.86:333,36,0	1/1:10,11:22:8.86:317,9,0	1/1:14,18:33:23.98:254,24,0	0/0:29,0:30:55.89:0,56,653	0/0:32,0:32:48.06:0,48,557	0/0:21,0:21:18.15:0,18,567	0/0:14,0:11:26.98:0,27,303	0/0:24,0:20:36.60:0,37,355	0/0:25,0:24:48.03:0,48,511	0/0:45,0:38:51.40:0,51,621	0/0:21,1:21:7.25:0,7,418	0/0:16,0:16:35.96:0,36,442	0/0:39,0:41:26.09:0,26,1081	0/0:28,0:28:24.01:0,24,263	0/0:41,0:37:88.74:0,89,905	0/0:11,0:39:16.85:0,17,132	0/0:8,0:8:12:0,12,140
chr10	79371528	.	GTAGATAGA	G	9356.14	PASS	AB=0.958;AC=37;AF=0.712;AN=52;BaseQRankSum=-0.810;DP=717;FS=7.229;HRun=0;HaplotypeScore=218.0249;InbreedingCoeff=0.7989;MQ=55.89;MQ0=6;MQRankSum=-4.873;QD=17.82;ReadPosRankSum=0.012;VQSLOD=3.1600;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:23:32.74:61,0,33	1/1:8,8:16:21.07:409,21,0	./.	./.	1/1:16,14:30:5.72:132,6,0	0/0:15,0:26:27.09:0,27,839	0/0:15,0:22:12.04:0,12,396	1/1:28,0:26:9.01:102,9,0	1/1:9,0:34:30.06:445,30,0	1/1:10,31:41:93.20:1695,93,0	1/1:11,14:26:5.43:419,5,0	1/1:18,0:34:24.08:447,24,0	1/1:11,0:29:36.02:670,36,0	1/1:15,0:33:18.06:336,18,0	0/0:16,0:32:26.94:0,27,221	1/1:9,14:24:23.64:576,24,0	0/0:14,0:23:11.07:0,11,330	1/1:12,10:22:6.02:150,6,0	1/1:7,7:13:20.04:480,20,0	1/1:18,19:37:47.75:914,48,0	1/1:10,0:10:9.02:155,9,0	0/0:9,0:22:21.16:0,21,470	0/0:9,0:18:15.05:0,15,431	0/0:9,0:15:18.04:0,18,412	1/1:15,0:32:18.06:327,18,0	1/1:16,15:31:48.15:1048,48,0	1/1:16,24:41:35.95:766,36,0	1/1:13,6:19:9.03:225,9,0
chr10	79372708	.	G	GGA	4908.16	PASS	AB=0.854;AC=27;AF=0.482;AN=56;BaseQRankSum=0.417;DP=709;FS=13.462;HRun=0;HaplotypeScore=130.7037;InbreedingCoeff=0.1418;MQ=66.28;MQ0=12;MQRankSum=-0.762;QD=10.31;ReadPosRankSum=-1.423;VQSLOD=3.8045;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:42.58:466,43,0	1/1:5,4:11:15.03:199,15,0	0/1:44,0:20:0:0,0,0	0/0:59,0:25:8.28:0,8,95	0/1:14,7:19:50.90:226,0,51	0/0:31,0:31:65.87:0,66,701	0/1:17,1:21:20.50:20,0,339	1/1:32,0:32:36.07:319,36,0	0/1:16,0:16:13.13:184,0,13	0/1:23,3:26:18.70:469,0,19	0/1:17,5:22:28.19:40,0,28	0/0:21,0:23:50.74:0,51,523	0/0:19,0:20:44.95:0,45,485	0/0:18,0:20:47.96:0,48,519	0/1:14,8:26:3.44:286,0,3	1/1:3,11:14:21.07:301,21,0	0/0:26,0:27:40.73:0,41,521	0/1:11,1:11:27.83:40,0,28	1/1:21,12:34:51.04:526,51,0	0/1:15,13:31:58.39:335,0,58	0/1:16,6:23:70.20:70,0,108	0/1:22,1:24:49.32:49,0,365	0/0:23,0:24:21.10:0,21,326	0/0:24,0:28:50.80:0,51,534	0/1:7,0:21:9.41:9,0,33	0/1:11,13:24:15.91:545,0,16	1/1:14,8:23:28:493,28,0	1/1:12,5:17:32.12:330,32,0
chr10	79372731	.	G	GGAC	364.33	PASS	AB=0.890;AC=9;AF=0.161;AN=56;BaseQRankSum=5.578;DP=685;FS=10.737;HRun=0;HaplotypeScore=153.0528;InbreedingCoeff=0.0877;MQ=55.65;MQ0=15;MQRankSum=2.341;QD=2.08;ReadPosRankSum=1.070;VQSLOD=1.9708;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:29:20.66:189,21,0	0/1:11,0:11:13.79:14,0,56	0/0:28,0:9:5.49:0,5,184	0/0:43,0:11:16.03:0,16,257	0/0:24,0:22:37.47:0,37,328	0/0:31,0:30:86.76:0,87,1513	0/0:27,0:27:80.61:0,81,1208	0/0:43,0:43:1.71:0,2,1031	0/1:1,0:16:5.66:83,0,6	0/1:15,2:25:90.19:90,0,416	0/0:20,0:20:23.34:0,23,204	0/0:23,0:23:62.87:0,63,498	0/1:22,0:22:7.92:8,0,430	0/0:20,0:20:52.76:0,53,466	0/0:24,0:24:47.48:0,47,622	0/1:16,0:16:24.47:24,0,118	0/0:24,0:25:65.41:0,65,1095	0/0:15,0:14:32.61:0,33,313	0/0:33,0:32:56.73:0,57,850	0/1:31,0:31:35.88:36,0,423	0/0:23,0:23:37.99:0,38,389	0/0:23,0:23:46.55:0,47,921	0/0:24,0:24:62.86:0,63,1053	0/0:31,0:31:81.07:0,81,1391	0/0:18,0:18:11.03:0,11,203	0/0:19,0:19:39.18:0,39,456	0/1:25,0:24:62.97:63,0,205	0/0:15,0:15:17.48:0,17,268
chr10	79372766	.	A	ACAGAGG	8927.32	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-4.742;DP=619;FS=11.294;HRun=0;HaplotypeScore=156.2920;InbreedingCoeff=0.9707;MQ=74.20;MQ0=7;MQRankSum=-3.382;QD=30.78;ReadPosRankSum=-3.168;VQSLOD=3.5349;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:40.29:0,40,308	1/1:10,1:11:21.05:416,21,0	0/0:39,0:25:21.81:0,22,422	0/0:43,0:26:4.85:0,5,345	1/1:1,13:17:23.75:164,24,0	0/0:22,0:21:52.82:0,53,784	0/0:21,0:21:60.14:0,60,955	1/1:51,0:51:99:1598,148,0	0/0:15,0:15:25.87:0,26,202	1/1:17,0:17:48.05:759,48,0	1/1:17,0:17:35.99:406,36,0	0/0:21,0:21:50.31:0,50,654	0/0:28,0:28:62.42:0,62,872	0/0:25,0:25:66.70:0,67,827	1/1:22,0:22:46.92:688,47,0	1/1:10,2:12:30.07:543,30,0	0/0:21,0:21:32.06:0,32,861	1/1:11,0:11:29.99:332,30,0	1/1:30,0:30:86.64:1008,87,0	1/1:29,4:33:87.34:1199,87,0	1/1:17,0:17:33.01:382,33,0	0/0:18,0:17:45.04:0,45,705	0/0:16,0:16:45.09:0,45,743	0/0:28,0:28:75.06:0,75,1160	0/0:12,0:12:33.06:0,33,487	1/1:13,0:13:39.03:559,39,0	1/1:1,26:28:15.01:504,15,0	1/1:9,1:10:9.19:370,9,0
chr10	79374576	.	ATG	A	520.90	PASS	AB=0.801;AC=14;AF=0.259;AN=54;BaseQRankSum=6.688;DP=270;FS=1.306;HRun=0;HaplotypeScore=73.5676;InbreedingCoeff=-0.4038;MQ=39.72;MQ0=3;MQRankSum=-6.354;QD=3.10;ReadPosRankSum=3.319;VQSLOD=1.6680;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,1:8:39.34:39,0,56	0/0:3,0:3:5.53:0,6,121	0/0:8,0:3:1.87:0,2,11	./.	0/0:9,2:11:18.06:0,18,354	0/1:10,1:11:50.61:51,0,254	0/1:8,4:12:17:17,0,152	0/1:8,6:14:79.60:80,0,206	0/1:10,4:14:68.47:68,0,174	0/1:6,2:8:25.45:25,0,298	0/0:10,0:10:4.30:0,4,118	0/1:11,2:13:81.66:82,0,141	0/0:13,0:13:12.01:0,12,150	0/0:11,2:13:12.04:0,12,185	0/0:7,4:11:9.03:0,9,172	0/1:11,10:21:66.52:67,0,364	0/0:5,0:5:11.99:0,12,178	0/0:3,0:2:6.02:0,6,122	0/1:7,1:7:30.68:31,0,286	0/1:11,4:15:57.27:57,0,223	0/0:7,0:6:12.88:0,13,167	0/0:5,2:7:6.02:0,6,122	0/1:5,3:8:14.18:14,0,55	0/0:6,0:6:6.02:0,6,111	0/1:9,1:11:49.35:82,0,49	0/1:13,2:15:1.38:1,0,596	0/1:5,4:9:49.43:49,0,210	0/0:1,0:1:3.01:0,3,41
chr10	79374862	.	CCAAG	C	6897.73	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.821;DP=571;FS=51.688;HRun=0;HaplotypeScore=94.4285;InbreedingCoeff=0.9692;MQ=90.53;MQ0=0;MQRankSum=-1.932;QD=48.92;ReadPosRankSum=5.228;VQSLOD=2.6887;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:38:90.31:1731,90,0	0/0:14,0:14:36.12:0,36,986	0/0:24,1:25:14.88:0,15,1634	0/0:24,0:24:63.19:0,63,1481	0/0:13,0:13:39.13:0,39,1036	0/0:25,0:25:75.26:0,75,2000	0/0:30,0:30:84.29:0,84,2220	0/0:32,0:32:90.30:0,90,2355	1/1:0,21:21:54.19:1046,54,0	0/0:17,0:17:51.18:0,51,1391	0/0:10,0:10:27.09:0,27,739	1/1:0,30:30:66.23:1279,66,0	1/1:1,27:28:78.27:1509,78,0	1/1:0,24:24:69.24:1333,69,0	0/0:41,0:41:99:0,114,3009	0/0:25,0:25:72.25:0,72,1941	0/0:26,0:26:78.25:0,78,2034	0/0:10,0:10:24.08:0,24,657	0/0:27,0:27:81.28:0,81,2157	0/0:11,0:11:33.07:0,33,841	0/0:23,0:23:66.23:0,66,1786	0/0:12,0:12:33.11:0,33,858	0/0:12,0:12:36.12:0,36,925	0/0:8,0:8:24.08:0,24,635	0/0:6,0:6:18.05:0,18,437	0/0:15,0:15:45.15:0,45,1164	0/0:22,0:22:66.23:0,66,1808	0/0:2,0:2:6.02:0,6,164
chr10	79376218	.	GT	G	8654.44	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=5.515;DP=503;FS=6.967;HRun=10;HaplotypeScore=52.5637;InbreedingCoeff=0.9487;MQ=77.76;MQ0=0;MQRankSum=-2.113;QD=21.42;ReadPosRankSum=2.973;VQSLOD=5.7780;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,17:22:44.97:390,45,0	1/1:2,9:11:26.99:234,27,0	0/0:15,1:16:26.76:0,27,257	0/0:9,0:9:8.97:0,9,83	1/1:3,27:30:68.95:599,69,0	0/0:15,0:16:44.95:0,45,479	0/0:12,0:12:30.08:0,30,332	1/1:8,28:36:80.92:696,81,0	1/1:2,15:17:41.99:365,42,0	1/1:3,19:22:56.96:488,57,0	1/1:3,13:16:32.12:284,32,0	1/1:2,14:16:38.98:339,39,0	1/1:3,16:19:47.99:417,48,0	1/1:1,17:18:50.99:443,51,0	1/1:2,21:23:29.81:488,30,0	1/1:3,15:18:41.99:365,42,0	0/0:19,0:19:39.07:0,39,419	1/1:3,17:20:41.15:385,41,0	1/1:2,14:17:30.61:350,31,0	1/1:0,17:17:47.98:417,48,0	1/1:0,16:16:47.99:417,48,0	0/0:8,0:8:21.05:0,21,225	0/0:8,0:9:23.90:0,24,246	0/0:9,1:10:1.02:0,1,239	1/1:1,18:19:53.99:469,54,0	1/1:2,20:22:59.98:521,60,0	1/1:3,26:29:74.98:651,75,0	1/1:1,15:16:38.98:338,39,0
chr10	79380660	.	G	GC	679.18	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.261;DP=561;FS=3.837;HRun=3;HaplotypeScore=61.6315;InbreedingCoeff=0.9025;MQ=78.23;MQ0=0;MQRankSum=-1.702;QD=17.87;ReadPosRankSum=-1.207;VQSLOD=3.0270;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:55.74:0,56,312	0/0:7,0:7:21.06:0,21,252	0/0:20,0:20:57.16:0,57,668	0/0:16,0:14:36.10:0,36,420	0/0:35,0:35:99:0,102,1206	0/0:22,0:21:66.20:0,66,792	0/0:19,0:19:51.16:0,51,612	0/0:30,0:30:78.23:0,78,928	0/0:10,0:10:0.90:0,1,100	0/0:27,0:27:78.24:0,78,936	0/0:27,0:27:75.23:0,75,900	1/1:4,9:13:30.07:350,30,0	1/1:4,5:9:10.37:133,10,0	1/1:4,11:16:23.12:333,23,0	0/0:24,0:24:69.21:0,69,828	0/0:22,0:22:60.05:0,60,698	0/0:25,0:25:72.22:0,72,863	0/0:10,0:10:30.09:0,30,360	0/0:23,0:23:63.19:0,63,756	0/0:30,0:30:78.23:0,78,925	0/0:20,0:20:51.16:0,51,611	0/0:24,0:24:69.21:0,69,827	0/0:20,0:20:57.17:0,57,684	0/0:10,0:10:30.09:0,30,359	0/0:21,0:21:54.17:0,54,648	0/0:26,0:26:75.23:0,75,900	0/0:22,0:21:66.20:0,66,792	0/0:9,0:9:27.08:0,27,324
chr10	79381764	.	A	AC	334.45	PASS	AB=0.717;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.151;DP=577;FS=7.308;HRun=9;HaplotypeScore=61.4854;InbreedingCoeff=0.4676;MQ=68.48;MQ0=0;MQRankSum=-1.133;QD=4.71;ReadPosRankSum=-3.846;VQSLOD=-0.4554;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:62.97:0,63,547	0/1:10,1:11:3.18:3,0,204	0/0:22,0:22:33.65:0,34,269	0/0:20,0:19:8.50:0,9,217	0/0:22,0:23:62.01:0,62,525	0/0:26,0:26:50.59:0,51,531	0/0:18,0:18:38.98:0,39,339	0/0:27,0:27:29.38:0,29,256	0/0:20,0:20:47.92:0,48,417	0/0:20,0:20:44.95:0,45,386	0/0:16,0:16:11.84:0,12,331	1/1:2,14:16:24.02:252,24,0	0/1:6,9:15:17.03:57,0,17	0/1:5,9:14:56.65:96,0,57	0/0:30,0:31:76.99:0,77,657	0/0:33,0:33:83.93:0,84,720	0/0:22,0:23:47.01:0,47,396	0/0:17,0:18:41.02:0,41,343	0/0:22,0:22:44.96:0,45,387	0/0:27,0:28:67.97:0,68,570	0/0:24,0:25:61.94:0,62,518	0/0:12,0:12:26.99:0,27,234	0/0:18,0:19:46.99:0,47,388	0/0:30,0:30:74.96:0,75,650	1/1:15,0:14:8.79:58,9,0	0/0:24,0:25:65.01:0,65,552	0/0:14,0:14:29.97:0,30,260	0/0:6,0:6:2.97:0,3,26
chr10	79382357	.	CAAA	C	10080.26	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=2.211;DP=555;FS=0.000;HRun=14;HaplotypeScore=94.2871;InbreedingCoeff=0.9582;MQ=71.76;MQ0=1;MQRankSum=-3.806;QD=25.98;ReadPosRankSum=3.092;VQSLOD=4.2880;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,12:15:24.01:281,24,0	1/1:1,8:10:19.47:243,19,0	0/0:42,0:22:35.24:0,35,388	0/0:23,0:10:9.02:0,9,117	1/1:4,25:30:62.91:718,63,0	0/0:18,0:19:48.13:0,48,798	0/0:12,0:13:36.10:0,36,643	1/1:5,16:26:54.01:597,54,0	1/1:3,11:14:27.04:306,27,0	1/1:4,22:26:63.09:725,63,0	1/1:2,21:24:39:644,39,0	1/1:1,2:3:5.99:70,6,0	1/1:3,28:31:81.05:945,81,0	1/1:3,14:18:33.01:368,33,0	1/1:2,10:12:30.06:351,30,0	1/1:2,21:25:57.13:695,57,0	0/0:9,0:13:33.05:0,33,505	1/1:2,6:8:14.96:175,15,0	1/1:5,10:17:35.96:400,36,0	1/1:6,18:26:49.38:557,49,0	1/1:0,5:5:9:105,9,0	0/0:16,0:19:48.08:0,48,739	0/0:21,0:24:60.16:0,60,1037	0/0:10,0:10:24.08:0,24,440	1/1:2,19:22:52.67:628,53,0	1/1:3,23:26:72.20:840,72,0	1/1:1,34:38:97.68:1120,98,0	1/1:2,9:12:25.60:313,26,0
chr10	79384021	.	TG	T	1763.13	PASS	AB=0.885;AC=14;AF=0.250;AN=56;BaseQRankSum=12.436;DP=855;DS;FS=10.540;HRun=4;HaplotypeScore=69.8969;InbreedingCoeff=-0.3833;MQ=34.35;MQ0=261;MQRankSum=-0.955;QD=3.94;ReadPosRankSum=0.985;VQSLOD=-0.6240;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:39,12:41:99:171,0,519	0/0:12,0:4:6.02:0,6,84	0/0:23,0:2:3.01:0,3,42	0/0:27,0:3:9.03:0,9,107	0/0:18,1:9:18.06:0,18,251	0/0:16,0:16:33.11:0,33,455	0/1:46,0:23:98.17:98,0,273	0/0:87,5:1:3.01:0,3,42	0/0:22,0:20:33.11:0,33,453	0/1:35,0:12:0.45:0,0,383	0/1:23,0:11:33.73:34,0,343	0/1:16,8:21:99:110,0,258	0/1:23,10:30:99:123,0,425	0/0:27,4:29:0.22:0,0,424	0/0:22,0:20:18.06:0,18,251	0/1:26,0:25:92.15:92,0,373	0/1:27,26:46:99:636,0,434	0/1:20,16:32:99:346,0,393	0/1:37,0:10:99:104,0,199	0/1:14,0:8:79.51:80,0,146	0/0:58,0:41:75.20:0,75,1025	0/1:21,0:9:12.47:12,0,225	0/1:13,1:7:20.69:21,0,152	0/1:24,11:30:79.73:80,0,650	0/0:20,0:14:5.45:0,5,422	0/0:27,0:10:30.10:0,30,420	0/0:33,0:29:26.63:0,27,762	0/0:5,0:1:3.01:0,3,42
chr10	79389130	.	ACTCTCTCTCTCTCTCTCTCT	A	411.84	PASS	AB=0.958;AC=3;AF=0.060;AN=50;BaseQRankSum=2.825;DP=542;FS=0.000;HRun=0;HaplotypeScore=245.1898;InbreedingCoeff=0.2759;MQ=68.68;MQ0=28;MQRankSum=-2.842;QD=10.04;ReadPosRankSum=-0.964;VQSLOD=2.3172;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:9.03:0,9,216	0/0:7,0:8:6.01:0,6,82	./.	0/0:45,0:15:1.83:0,2,3	0/0:21,0:21:6.49:0,6,246	0/0:17,0:17:3.01:0,3,122	0/0:16,0:16:6.02:0,6,196	0/0:40,0:38:7.31:0,7,68	0/0:13,0:12:12.04:0,12,416	0/0:23,0:22:12.93:0,13,379	0/0:15,0:15:9.03:0,9,195	0/0:14,0:14:15.05:0,15,300	0/1:22,0:23:31.97:32,0,414	0/0:9,0:11:12.51:0,13,255	0/0:14,0:16:18.06:0,18,560	0/0:16,0:15:21.07:0,21,749	0/0:27,0:27:15.05:0,15,565	0/0:18,0:18:21.16:0,21,388	0/0:17,0:16:10.84:0,11,149	0/0:33,0:32:6.02:0,6,161	0/0:18,0:15:6.02:0,6,220	./.	0/0:10,0:10:3.01:0,3,48	0/0:17,0:17:20.94:0,21,842	1/1:12,6:17:8.53:474,9,0	0/0:14,0:14:11.07:0,11,251	0/0:19,0:19:30.06:0,30,794	./.
chr10	79390696	.	G	GT	2809.26	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-4.189;DP=683;FS=0.851;HRun=9;HaplotypeScore=79.3939;InbreedingCoeff=0.9759;MQ=78.95;MQ0=0;MQRankSum=-0.594;QD=23.22;ReadPosRankSum=-1.366;VQSLOD=3.8431;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:22:48.97:519,49,0	0/0:12,0:12:29.99:0,30,260	0/0:18,0:18:6.56:0,7,195	0/0:21,0:20:35.86:0,36,287	0/0:32,0:32:80.97:0,81,702	0/0:21,1:22:20.78:0,21,405	0/0:17,0:17:44.94:0,45,382	0/0:31,0:32:67.98:0,68,573	1/1:4,13:17:45.04:474,45,0	0/0:30,0:30:62.95:0,63,547	0/0:22,0:22:62.99:0,63,547	1/1:3,27:30:63.17:697,63,0	1/1:3,25:28:63.17:697,63,0	1/1:2,22:24:54.15:597,54,0	0/0:23,0:23:59.97:0,60,521	0/0:20,0:20:56.99:0,57,495	0/0:29,1:30:56.80:0,57,722	0/0:26,0:26:55.22:0,55,472	0/0:30,0:30:71.97:0,72,625	0/0:34,0:34:92.96:0,93,804	0/0:15,0:15:35.99:0,36,313	0/0:26,0:26:65.97:0,66,573	0/0:30,0:30:71.97:0,72,625	0/0:27,1:28:44.80:0,45,618	0/0:29,0:29:77.98:0,78,677	0/0:24,0:24:62.98:0,63,547	0/0:32,0:32:80.97:0,81,703	0/0:9,0:9:19.80:0,20,161
chr10	79397201	.	A	AT	8371.78	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-14.274;DP=639;FS=1.428;HRun=10;HaplotypeScore=59.4058;InbreedingCoeff=0.9634;MQ=71.45;MQ0=0;MQRankSum=-0.694;QD=23.78;ReadPosRankSum=-0.684;VQSLOD=5.3329;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:56.90:0,57,463	1/1:3,13:16:14.45:359,14,0	0/0:9,0:9:14.97:0,15,123	0/0:9,0:9:19.70:0,20,145	1/1:9,23:32:36.09:585,36,0	0/0:35,0:35:86.88:0,87,714	0/0:16,0:16:38.86:0,39,310	1/1:6,28:35:81.64:847,82,0	0/0:24,0:26:58.19:0,58,466	1/1:5,21:26:38.48:600,38,0	1/1:4,26:31:50.38:726,50,0	0/0:23,0:23:56.93:0,57,468	0/0:23,0:23:53.91:0,54,442	0/0:22,1:23:30.94:0,31,460	1/1:1,20:21:57.14:608,57,0	1/1:1,20:21:51.13:544,51,0	0/0:32,0:32:68.89:0,69,566	1/1:1,18:19:45.11:480,45,0	1/1:6,15:21:42.10:443,42,0	1/1:5,32:37:84.17:884,84,0	1/1:2,16:18:33.08:352,33,0	0/0:18,0:18:38.51:0,39,340	0/0:24,1:25:33.87:0,34,476	0/0:3,0:3:5.98:0,6,49	0/0:22,1:23:14.76:0,15,318	1/1:3,25:29:72.18:763,72,0	1/1:1,40:40:99:1120,105,0	1/1:1,4:5:6.02:64,6,0
chr10	79399368	.	TA	T	9644.65	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=11.704;DP=546;FS=6.541;HRun=9;HaplotypeScore=107.3723;InbreedingCoeff=0.9319;MQ=66.95;MQ0=0;MQRankSum=0.058;QD=23.02;ReadPosRankSum=1.555;VQSLOD=4.7436;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:51.02:467,51,0	1/1:2,8:10:24.01:220,24,0	0/0:15,1:16:0.19:0,0,252	0/0:14,0:14:14.23:0,14,182	1/1:2,26:28:77.93:696,78,0	0/0:26,0:26:72.20:0,72,823	0/0:11,0:11:30.08:0,30,337	1/1:6,30:36:89.83:812,90,0	1/1:0,12:12:36.02:329,36,0	1/1:1,23:24:69.02:627,69,0	1/1:1,25:26:71.96:648,72,0	1/1:3,15:18:33.01:302,33,0	1/1:1,25:26:72.04:659,72,0	1/1:3,18:21:42.02:384,42,0	1/1:5,19:24:54.03:494,54,0	1/1:1,13:15:38.06:335,38,0	0/0:9,0:9:24.07:0,24,277	1/1:0,12:12:33.02:302,33,0	1/1:2,13:15:39.02:357,39,0	1/1:2,32:34:89.90:794,90,0	1/1:2,2:4:6:55,6,0	0/0:16,0:18:50.82:0,51,548	0/0:28,0:28:75.19:0,75,838	0/0:5,0:5:15.04:0,15,173	1/1:5,17:22:45.02:412,45,0	1/1:0,24:24:72:647,72,0	1/1:5,30:36:89.07:802,89,0	1/1:0,11:11:33.02:302,33,0
chr10	79400583	.	C	CA	7211.56	PASS	AB=0.800;AC=40;AF=0.714;AN=56;BaseQRankSum=1.899;DP=561;FS=3.432;HRun=10;HaplotypeScore=75.5199;InbreedingCoeff=0.7964;MQ=68.90;MQ0=8;MQRankSum=-0.385;QD=17.50;ReadPosRankSum=0.751;VQSLOD=5.4720;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:14:22.83:115,23,0	1/1:1,6:8:23.76:221,24,0	0/1:33,0:12:8.20:8,0,60	0/0:26,0:14:2.60:0,3,66	1/1:6,26:33:9.28:676,9,0	0/0:22,0:22:56.91:0,57,467	0/0:22,0:22:53.92:0,54,440	1/1:8,15:23:45.57:472,46,0	1/1:2,0:15:28.54:144,29,0	1/1:5,25:30:78.16:814,78,0	1/1:8,17:26:37.97:561,38,0	1/1:5,0:12:26.40:157,26,0	1/1:2,1:19:34.43:190,34,0	1/1:4,0:21:40.01:201,40,0	1/1:3,18:21:26.74:487,27,0	1/1:3,17:20:42.11:448,42,0	0/0:19,0:19:56.94:0,57,468	1/1:2,8:11:11.19:154,11,0	0/1:6,11:18:5.80:325,0,6	1/1:2,28:32:84:860,84,0	1/1:0,9:10:26.90:270,27,0	0/0:15,0:16:40.99:0,41,326	0/0:33,1:34:86.85:0,87,709	0/0:9,0:10:25.99:0,26,199	1/1:9,0:24:43.48:217,43,0	1/1:2,15:18:20.30:405,20,0	1/1:1,17:18:14.46:359,14,0	1/1:1,4:5:12.03:128,12,0
chr10	79402312	.	C	CTGT	19173.48	PASS	AB=0.789;AC=39;AF=0.696;AN=56;BaseQRankSum=-12.281;DP=808;FS=0.355;HRun=0;HaplotypeScore=102.5367;InbreedingCoeff=0.9054;MQ=63.41;MQ0=0;MQRankSum=-0.825;QD=32.61;ReadPosRankSum=4.075;VQSLOD=5.3882;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,13:19:27.09:546,27,0	1/1:5,10:16:27.01:486,27,0	0/0:25,0:21:33.09:0,33,429	0/0:25,0:23:30.07:0,30,394	1/1:16,28:44:69.13:1287,69,0	0/0:40,0:39:87.25:0,87,1185	0/0:27,0:27:41.35:0,41,773	1/1:14,21:35:63.19:1155,63,0	1/1:10,25:38:29.52:1342,30,0	1/1:14,25:40:75.22:1399,75,0	0/1:11,4:15:27.72:187,0,28	1/1:9,32:41:93.32:1882,93,0	1/1:11,30:41:32.53:1415,33,0	1/1:5,12:19:36.12:725,36,0	1/1:5,34:39:96.33:1944,96,0	1/1:8,21:29:48.16:972,48,0	0/0:23,0:24:24.38:0,24,570	1/1:10,15:25:42.14:839,42,0	1/1:12,9:23:36.05:559,36,0	1/1:20,23:43:26.44:1239,26,0	1/1:4,17:21:36.12:729,36,0	0/0:33,0:33:81.24:0,81,1130	0/0:27,0:27:54.18:0,54,764	0/0:19,0:19:42.14:0,42,595	1/1:14,0:34:33.07:411,33,0	1/1:13,19:32:51.13:961,51,0	1/1:7,20:29:45.15:911,45,0	1/1:1,4:5:9.03:182,9,0
chr10	79403309	.	TA	T	13418.53	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=14.718;DP=577;FS=0.000;HRun=3;HaplotypeScore=126.5044;InbreedingCoeff=0.9821;MQ=76.23;MQ0=0;MQRankSum=-11.238;QD=32.97;ReadPosRankSum=0.750;VQSLOD=3.8406;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:66.11:758,66,0	1/1:0,8:8:24.02:277,24,0	0/0:22,0:22:59.16:0,59,756	0/0:14,0:14:33.08:0,33,423	1/1:4,17:21:57.06:655,57,0	0/0:19,0:19:54.17:0,54,755	0/0:16,0:16:48.16:0,48,685	1/1:5,27:32:90.17:1055,90,0	1/1:1,16:17:48.15:593,48,0	1/1:4,27:31:81.21:975,81,0	1/1:4,21:24:66.12:791,66,0	1/1:4,20:24:63.18:763,63,0	1/1:1,26:27:78.16:925,78,0	1/1:2,18:20:57.11:682,57,0	1/1:2,30:32:93.14:1095,93,0	1/1:5,14:19:54.15:640,54,0	0/0:28,0:28:84.27:0,84,1182	1/1:1,6:7:18.06:222,18,0	1/1:2,27:29:84.20:1006,84,0	1/1:2,23:25:71.99:815,72,0	1/1:2,16:18:44.79:535,45,0	0/0:13,0:13:36.11:0,36,499	0/0:22,0:22:63.21:0,63,902	0/0:21,0:21:60.19:0,60,841	0/0:15,0:14:39.13:0,39,552	1/1:2,19:21:63.19:768,63,0	1/1:5,19:24:69.11:788,69,0	1/1:0,2:2:6.02:74,6,0
chr10	79403335	.	ATTT	A	10869.41	PASS	AB=0.625;AC=39;AF=0.696;AN=56;BaseQRankSum=12.846;DP=541;FS=12.818;HRun=13;HaplotypeScore=150.1933;InbreedingCoeff=0.8466;MQ=58.20;MQ0=0;MQRankSum=-10.522;QD=26.38;ReadPosRankSum=0.457;VQSLOD=2.1907;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,26:33:65.97:782,66,0	1/1:2,8:11:23.96:273,24,0	0/0:12,0:11:14.95:0,15,205	0/0:11,0:9:0.08:0,0,63	1/1:2,21:24:46.39:580,46,0	0/0:17,0:21:57.13:0,57,976	0/0:16,0:17:45.11:0,45,798	1/1:10,24:35:70.45:851,70,0	1/1:4,10:14:8.02:339,8,0	1/1:6,18:24:60.10:720,60,0	1/1:1,19:19:45.08:546,45,0	1/1:4,19:23:51.10:620,51,0	1/1:3,28:32:84.07:1009,84,0	1/1:2,18:20:40.85:573,41,0	1/1:5,26:31:78.18:948,78,0	1/1:3,15:18:39.06:474,39,0	0/0:18,0:18:51.14:0,51,930	0/1:2,3:5:22.69:97,0,23	1/1:8,15:23:38.95:461,39,0	1/1:2,20:22:63.17:750,63,0	1/1:3,8:11:11.74:133,12,0	0/0:7,0:8:18.06:0,18,331	0/0:16,0:18:54.14:0,54,955	0/0:20,0:22:51.15:0,51,932	1/1:1,0:14:34.46:203,34,0	1/1:2,18:20:54.13:656,54,0	1/1:4,21:27:58.39:708,58,0	1/1:0,4:4:12.04:146,12,0
chr10	79403631	.	C	CT	8768.06	PASS	AB=0.581;AC=37;AF=0.661;AN=56;BaseQRankSum=-10.281;DP=516;FS=0.378;HRun=9;HaplotypeScore=49.8062;InbreedingCoeff=0.8912;MQ=79.78;MQ0=0;MQRankSum=-3.175;QD=24.02;ReadPosRankSum=-0.153;VQSLOD=5.3091;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:33.09:365,33,0	1/1:2,3:5:9.02:100,9,0	0/0:19,0:19:41.77:0,42,337	0/0:12,0:11:4.09:0,4,135	1/1:6,21:27:57.09:615,57,0	0/0:22,1:23:32.81:0,33,513	0/0:10,0:11:29.03:0,29,240	1/1:5,18:25:50.01:563,50,0	1/1:2,12:15:32.92:346,33,0	1/1:4,21:25:58.34:603,58,0	1/1:2,18:20:48.13:528,48,0	1/1:1,16:17:36.10:398,36,0	1/1:2,22:24:57.15:630,57,0	1/1:2,13:15:33.56:366,34,0	0/1:5,13:17:12.92:313,0,13	1/1:2,22:24:37.13:638,37,0	0/0:15,0:14:41.99:0,42,364	1/1:0,12:12:27.07:299,27,0	1/1:9,14:24:21.90:445,22,0	1/1:1,18:19:51.09:550,51,0	1/1:3,12:15:30.08:332,30,0	0/0:17,0:17:44.99:0,45,391	0/0:29,0:29:80.98:0,81,703	0/0:11,0:11:29.99:0,30,260	0/0:14,0:14:35.93:0,36,305	1/1:6,21:27:40.12:668,40,0	1/1:5,23:28:42.78:612,43,0	1/1:0,12:12:36.10:398,36,0
chr10	79403987	.	G	GA	3980.53	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-2.515;DP=670;FS=12.711;HRun=6;HaplotypeScore=83.0231;InbreedingCoeff=0.9999;MQ=86.15;MQ0=0;MQRankSum=-2.712;QD=32.63;ReadPosRankSum=2.822;VQSLOD=2.8966;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:72.19:888,72,0	0/0:12,0:12:36.08:0,36,367	0/0:23,0:23:45.54:0,46,450	0/0:24,0:23:57.07:0,57,558	0/0:51,0:51:99:0,144,1446	0/0:30,0:29:81.18:0,81,826	0/0:21,0:21:57.12:0,57,581	0/0:28,0:28:75.16:0,75,760	1/1:1,12:13:36.12:453,36,0	0/0:36,0:36:99:0,99,1010	0/0:25,0:25:66.15:0,66,673	1/1:1,25:26:72.23:906,72,0	1/1:6,28:34:84.21:1056,84,0	1/1:2,19:21:54.17:678,54,0	0/0:24,0:24:66.13:0,66,666	0/0:17,0:17:51.12:0,51,520	0/0:16,0:16:39.04:0,39,381	0/0:20,0:20:51.11:0,51,520	0/0:19,0:19:54.12:0,54,551	0/0:22,0:22:66.15:0,66,673	0/0:26,0:26:69.15:0,69,704	0/0:26,0:26:75.17:0,75,765	0/0:24,0:24:69.16:0,69,704	0/0:27,0:27:72.09:0,72,708	0/0:14,0:14:42.10:0,42,429	0/0:25,0:25:63.13:0,63,637	0/0:27,0:27:66.12:0,66,666	0/0:11,0:11:33.08:0,33,337
chr10	79405053	.	CA	C	16090.09	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=11.608;DP=665;FS=2.387;HRun=4;HaplotypeScore=63.2725;InbreedingCoeff=0.9971;MQ=80.47;MQ0=0;MQRankSum=-2.063;QD=32.18;ReadPosRankSum=1.969;VQSLOD=5.5876;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:87.27:1044,87,0	1/1:0,14:14:39.12:468,39,0	0/0:17,0:17:44.51:0,45,590	0/0:16,0:16:41.97:0,42,494	1/1:2,27:29:75.23:900,75,0	0/0:18,0:18:54.18:0,54,756	0/0:25,0:25:66.21:0,66,908	1/1:0,39:39:99:1323,114,0	1/1:1,17:18:51.16:612,51,0	1/1:1,33:34:99:1138,99,0	1/1:3,22:25:66.20:791,66,0	1/1:2,15:17:42.13:504,42,0	1/1:1,20:21:60.18:720,60,0	1/1:1,34:35:99:1188,99,0	1/1:2,28:30:72.22:864,72,0	1/1:1,21:22:51.16:612,51,0	0/0:12,0:12:36.12:0,36,504	1/1:1,10:11:27.08:324,27,0	1/1:0,19:19:57.17:684,57,0	1/1:0,26:26:75.23:900,75,0	1/1:1,28:29:75.23:900,75,0	0/0:28,0:28:84.25:0,84,1139	0/0:23,0:23:66.21:0,66,906	0/0:26,0:26:78.25:0,78,1075	1/1:1,30:31:81.25:972,81,0	1/1:2,27:29:81.22:957,81,0	1/1:1,31:32:84.26:1008,84,0	1/1:0,6:6:15.05:180,15,0
chr10	79406666	.	TCTC	T	1899.29	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.785;DP=582;FS=6.016;HRun=0;HaplotypeScore=78.3343;InbreedingCoeff=0.9960;MQ=84.22;MQ0=0;MQRankSum=-4.315;QD=38.76;ReadPosRankSum=3.280;VQSLOD=4.5042;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:51.17:867,51,0	0/0:10,0:10:30.09:0,30,648	0/0:23,0:23:65.20:0,65,1176	0/0:23,0:23:66.16:0,66,1286	0/0:17,0:17:45.15:0,45,1017	0/0:28,0:28:81.28:0,81,1790	0/0:18,0:18:51.17:0,51,1116	0/0:32,0:32:96.31:0,96,2078	1/1:0,13:13:33.11:562,33,0	0/0:29,0:29:87.29:0,87,1859	0/0:17,0:17:51.16:0,51,1132	0/0:30,0:30:87.27:0,87,1892	0/0:22,0:22:63.21:0,63,1372	0/0:23,0:23:66.21:0,66,1440	0/0:28,0:28:84.19:0,84,1758	0/0:21,0:21:63.15:0,63,1355	0/0:25,0:25:72.23:0,72,1574	0/0:22,0:21:66.15:0,66,1424	0/0:18,0:18:54.12:0,54,1069	0/0:24,0:24:72.25:0,72,1641	0/0:29,0:29:87.28:0,87,1904	0/0:12,0:12:35.94:0,36,714	0/0:8,0:8:24.07:0,24,509	0/0:20,0:20:60.21:0,60,1361	1/1:1,14:15:36.12:613,36,0	0/0:26,0:26:72.25:0,72,1631	0/0:22,0:22:66.23:0,66,1468	0/0:6,0:6:18.06:0,18,415
chr10	79406825	.	G	GTTC	4850.37	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=7.465;DP=453;FS=2.096;HRun=0;HaplotypeScore=86.2482;InbreedingCoeff=0.6939;MQ=54.24;MQ0=0;MQRankSum=-5.398;QD=13.00;ReadPosRankSum=-0.455;VQSLOD=4.4593;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,18:28:14.02:179,14,0	1/1:3,0:3:5.90:37,6,0	0/0:13,0:12:15.03:0,15,158	0/0:6,0:5:3.01:0,3,35	1/1:5,24:28:23.86:338,24,0	0/0:18,0:18:44.29:0,44,515	0/0:6,0:6:5.99:0,6,49	1/1:39,0:35:67.41:465,67,0	0/1:7,0:7:16.46:60,0,16	1/1:6,16:23:35.84:410,36,0	1/1:4,18:22:29.72:338,30,0	1/1:2,13:15:3.01:59,3,0	1/1:3,9:12:3.01:58,3,0	1/1:5,8:13:9.03:176,9,0	1/1:3,11:14:9.03:175,9,0	1/1:9,9:18:6.02:112,6,0	0/0:16,0:16:39.08:0,39,500	1/1:7,10:17:6.02:117,6,0	1/1:8,13:22:41.91:422,42,0	1/1:4,13:17:17.87:228,18,0	1/1:6,0:6:3:25,3,0	0/0:10,0:10:12:0,12,106	0/0:8,0:8:17.99:0,18,159	0/0:3,0:3:5.99:0,6,48	1/1:24,0:24:26.28:229,26,0	1/1:7,20:28:56.83:762,57,0	1/1:4,18:22:20.81:365,21,0	1/1:2,12:14:15.05:293,15,0
chr10	79406843	.	CTTATTA	C	1356.01	PASS	AB=1.000;AC=16;AF=0.348;AN=46;BaseQRankSum=-3.942;DP=384;FS=4.457;HRun=0;HaplotypeScore=106.0233;InbreedingCoeff=-0.3702;MQ=46.93;MQ0=3;MQRankSum=-1.825;QD=5.14;ReadPosRankSum=-7.213;VQSLOD=-0.1744;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:99:243,0,105	0/1:5,0:5:9.90:34,0,10	./.	./.	0/1:25,0:24:57.52:58,0,156	0/0:16,0:16:33.11:0,33,1011	./.	0/1:37,0:31:43.87:65,0,44	0/0:5,0:5:6.02:0,6,100	0/1:19,0:19:18.91:19,0,187	0/0:18,0:18:18.01:0,18,242	0/1:15,0:15:36.78:43,0,37	0/1:10,0:10:36.41:41,0,36	0/1:9,0:9:4.94:5,0,122	0/1:14,0:14:99:116,0,111	0/1:11,0:11:8.95:9,0,56	0/0:16,0:16:33.11:0,33,1027	0/1:13,0:13:65.55:107,0,66	0/1:19,0:19:39.98:40,0,99	0/0:14,0:14:9:0,9,112	./.	0/0:4,0:5:2.94:0,3,18	0/0:4,0:7:5.88:0,6,37	./.	1/1:10,11:21:27.09:539,27,0	0/0:25,0:25:5.23:0,5,437	0/1:22,0:22:99:163,0,262	0/1:14,0:13:17.77:18,0,184
chr10	79407858	.	G	GA	2536.92	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.125;DP=664;FS=1.511;HRun=6;HaplotypeScore=63.4346;InbreedingCoeff=0.9990;MQ=78.83;MQ0=0;MQRankSum=-0.037;QD=31.32;ReadPosRankSum=1.447;VQSLOD=4.3081;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.19:0,87,888	0/0:13,0:13:33.07:0,33,336	0/0:17,0:17:24.05:0,24,244	0/0:16,0:16:31.51:0,32,334	0/0:39,0:39:99:0,102,1029	0/0:18,0:18:51.10:0,51,514	0/0:23,0:23:60.12:0,60,606	0/0:37,0:36:99:0,99,1005	0/0:26,0:26:72.16:0,72,734	0/0:26,0:26:72.15:0,72,728	0/0:25,0:25:60.11:0,60,600	1/1:1,20:21:57.18:717,57,0	1/1:4,27:31:78.25:981,78,0	1/1:0,29:29:78.25:981,78,0	0/0:26,0:26:72.14:0,72,721	0/0:24,0:24:60.13:0,60,612	0/0:23,0:23:69.16:0,69,704	0/0:13,0:13:39.05:0,39,387	0/0:22,0:22:60.12:0,60,609	0/0:30,0:30:84.19:0,84,856	0/0:19,0:19:54.12:0,54,551	0/0:26,0:26:72.13:0,72,719	0/0:19,0:19:48.10:0,48,487	0/0:16,0:16:42.09:0,42,428	0/0:20,0:20:60.14:0,60,612	0/0:23,0:23:63.14:0,63,642	0/0:38,0:38:96.19:0,96,970	0/0:12,0:12:36.08:0,36,367
chr10	79408212	.	GTCACAGCATAGAAAGGGGC	G	28011.26	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=18.299;DP=602;FS=0.328;HRun=0;HaplotypeScore=327.6324;InbreedingCoeff=0.9562;MQ=81.62;MQ0=0;MQRankSum=-15.910;QD=99.68;ReadPosRankSum=2.603;VQSLOD=3.9658;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.30:0,87,7299	1/1:1,10:11:27.09:1423,27,0	0/0:20,0:20:57.15:0,57,3007	0/0:22,0:22:66.23:0,66,3734	1/1:7,26:33:66.19:2487,66,0	0/0:30,0:30:90.31:0,90,7790	0/0:12,0:12:36.12:0,36,2934	1/1:11,16:27:48.14:1894,48,0	0/0:19,0:19:57.20:0,57,4373	1/1:10,20:30:60.21:3083,60,0	1/1:2,11:13:33.07:1495,33,0	0/0:16,0:16:45.15:0,45,3496	0/0:33,0:33:99:0,99,7654	0/0:30,0:30:87.28:0,87,7546	1/1:5,19:24:57.20:2896,57,0	1/1:8,23:31:66.23:3557,66,0	0/0:10,0:10:27.09:0,27,2094	1/1:3,4:7:6.02:323,6,0	1/1:4,4:8:12.03:511,12,0	1/1:4,27:31:78.27:4015,78,0	1/1:5,4:9:3.01:127,3,0	0/0:22,0:22:66.21:0,66,5145	0/0:22,0:22:66.23:0,66,5640	0/0:33,0:33:96.33:0,96,8066	0/0:23,0:23:69.24:0,69,6110	1/1:4,19:23:57.20:2980,57,0	1/1:12,14:26:42.14:2246,42,0	1/1:2,6:8:18.06:970,18,0
chr10	79409682	.	A	AT	11337.90	PASS	AB=0.542;AC=39;AF=0.696;AN=56;BaseQRankSum=-11.979;DP=591;FS=0.794;HRun=9;HaplotypeScore=55.1485;InbreedingCoeff=0.8972;MQ=71.17;MQ0=1;MQRankSum=0.392;QD=25.36;ReadPosRankSum=-0.476;VQSLOD=5.2643;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,30:34:78.17:849,78,0	1/1:1,10:11:30.08:332,30,0	0/0:9,0:9:14.33:0,14,107	0/0:12,0:11:11.98:0,12,104	1/1:7,23:30:66.10:703,66,0	0/0:19,2:21:20.79:0,21,410	0/0:15,0:15:38.99:0,39,339	1/1:8,21:29:54.62:598,55,0	1/1:4,21:25:40.12:657,40,0	1/1:4,8:12:18.05:199,18,0	1/1:6,19:25:34.07:591,34,0	0/1:2,11:13:16.02:296,0,16	1/1:3,26:29:79.44:856,79,0	1/1:1,20:21:51.14:564,51,0	1/1:1,27:28:72.19:797,72,0	1/1:2,14:16:42.11:465,42,0	0/0:28,0:28:80.97:0,81,702	1/1:1,14:15:39.11:431,39,0	1/1:5,19:24:37.10:627,37,0	1/1:6,28:34:81.22:896,81,0	1/1:3,17:20:54.13:588,54,0	0/0:26,0:26:62.97:0,63,547	0/0:14,0:14:38.99:0,39,338	0/0:19,0:19:47.27:0,47,416	1/1:5,16:21:10.04:339,10,0	1/1:5,24:29:69.17:753,69,0	1/1:3,22:25:57.15:630,57,0	1/1:0,6:6:15.04:166,15,0
chr10	79410350	.	C	CA	7997.82	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=2.220;DP=649;FS=0.994;HRun=9;HaplotypeScore=91.9089;InbreedingCoeff=0.9900;MQ=63.73;MQ0=6;MQRankSum=-0.450;QD=25.97;ReadPosRankSum=-2.630;VQSLOD=3.8531;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:85.23:0,85,875	1/1:0,8:8:21.06:232,21,0	0/0:14,0:10:17.98:0,18,154	0/0:11,0:10:23.92:0,24,198	1/1:2,35:37:91.13:997,91,0	0/0:35,0:35:92.94:0,93,800	0/0:23,0:23:56.97:0,57,490	1/1:5,21:26:65.83:683,66,0	0/0:25,0:25:53.95:0,54,468	1/1:4,29:33:83.98:877,84,0	1/1:0,15:16:38.81:371,39,0	0/0:27,0:27:77.98:0,78,677	0/0:28,0:28:68.96:0,69,599	0/0:22,0:22:53.97:0,54,469	1/1:4,33:37:73.21:1036,73,0	1/1:3,20:23:57.12:618,57,0	0/0:22,0:22:62.99:0,63,547	1/1:3,14:17:36.10:398,36,0	1/1:3,15:15:45.10:488,45,0	1/1:1,17:18:51.06:537,51,0	1/1:0,14:14:39.11:431,39,0	0/0:26,0:26:68.98:0,69,599	0/0:18,0:19:53.03:0,53,449	0/0:22,0:22:59.96:0,60,516	0/0:25,0:25:65.98:0,66,573	1/1:8,18:26:51.14:564,51,0	1/1:3,25:28:60.16:664,60,0	1/1:3,3:6:9.02:100,9,0
chr10	79410977	.	AGTGTGT	A	1385.06	PASS	AB=0.877;AC=19;AF=0.380;AN=50;BaseQRankSum=4.850;DP=667;FS=0.000;HRun=0;HaplotypeScore=137.3304;InbreedingCoeff=0.3616;MQ=61.18;MQ0=20;MQRankSum=-4.777;QD=5.29;ReadPosRankSum=0.575;VQSLOD=2.5413;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:49:30:0,30,542	./.	./.	./.	1/1:20,6:28:4.29:63,4,0	0/0:20,0:19:15.03:0,15,309	0/0:27,0:30:27.93:0,28,541	0/1:30,0:26:4.41:4,0,37	0/0:12,0:20:6.83:0,7,106	1/1:14,5:18:9:142,9,0	0/1:11,5:17:14.98:36,0,15	0/0:25,0:30:46.91:0,47,977	0/0:17,0:23:19.85:0,20,441	0/0:13,0:24:12.03:0,12,260	1/1:17,10:30:21.07:366,21,0	0/1:15,4:19:14.02:99,0,14	0/0:18,0:19:17.11:0,17,294	0/1:17,3:21:35.22:108,0,35	0/1:16,0:16:7.42:11,0,7	0/1:13,3:15:6.94:170,0,7	0/0:43,0:39:6.83:0,7,110	0/0:22,0:22:42.06:0,42,746	0/0:10,0:10:18.06:0,18,519	0/0:39,0:39:63.12:0,63,1459	0/1:14,1:16:86.47:86,0,268	1/1:13,7:20:13.76:185,14,0	1/1:9,5:15:9.97:164,10,0	1/1:12,2:13:6.01:121,6,0
chr10	79411963	.	C	CA	14085.86	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=-1.863;DP=504;FS=0.000;HRun=1;HaplotypeScore=250.7189;InbreedingCoeff=0.6292;MQ=30.10;MQ0=0;MQRankSum=-0.221;QD=28.12;ReadPosRankSum=1.465;VQSLOD=4.2217;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:17:39.02:511,39,0	1/1:1,8:9:27.09:403,27,0	./.	0/0:2,0:1:2.92:0,3,17	1/1:1,21:21:45.15:672,45,0	1/1:1,14:14:24.08:359,24,0	1/1:3,23:25:38.53:483,39,0	1/1:8,28:36:72.17:1044,72,0	1/1:3,23:23:57.14:807,57,0	1/1:5,19:23:51.06:738,51,0	1/1:0,19:19:36.12:534,36,0	1/1:6,14:18:38.95:559,39,0	1/1:3,17:18:51.03:666,51,0	1/1:1,11:11:21.07:314,21,0	1/1:2,23:22:59.98:773,60,0	1/1:2,22:22:54.15:784,54,0	1/1:1,11:12:18.06:269,18,0	1/1:0,5:4:6.02:89,6,0	1/1:3,16:17:27.09:403,27,0	1/1:1,30:30:78.05:1036,78,0	1/1:3,8:11:26.97:330,27,0	1/1:3,28:30:45.02:598,45,0	1/1:4,21:25:51.04:685,51,0	1/1:3,5:8:8.99:110,9,0	1/1:1,26:25:48.12:693,48,0	1/1:1,20:20:51.17:756,51,0	1/1:1,8:9:18.03:245,18,0	1/1:1,5:6:15.05:224,15,0
chr10	79411983	.	C	CA	13669.25	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=1.494;DP=500;FS=5.237;HRun=2;HaplotypeScore=317.9770;InbreedingCoeff=0.6532;MQ=26.94;MQ0=0;MQRankSum=1.722;QD=27.39;ReadPosRankSum=0.695;VQSLOD=3.4189;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:18:45.10:610,45,0	1/1:1,8:9:24.01:314,24,0	0/0:1,0:1:2.97:0,3,20	./.	1/1:6,22:27:54.10:726,54,0	1/1:0,18:17:39.13:549,39,0	1/1:1,29:29:63.05:882,63,0	1/1:7,27:33:60.20:861,60,0	1/1:4,16:17:27.09:387,27,0	1/1:3,23:25:63.02:831,63,0	1/1:3,17:20:35.98:420,36,0	1/1:2,18:18:51.10:687,51,0	1/1:3,18:19:45.15:645,45,0	1/1:3,13:15:30.07:398,30,0	1/1:10,15:22:36.04:467,36,0	1/1:2,20:20:48.12:654,48,0	1/1:0,8:8:12.04:168,12,0	1/1:0,4:3:6.02:86,6,0	1/1:3,13:14:21.07:301,21,0	1/1:4,22:25:54.09:721,54,0	1/1:2,8:10:21.07:301,21,0	1/1:2,31:32:72.15:968,72,0	1/1:2,17:19:39.13:558,39,0	1/1:2,9:10:15.05:210,15,0	1/1:5,23:26:51.17:730,51,0	1/1:0,17:16:39.13:559,39,0	1/1:1,11:12:30.03:378,30,0	1/1:1,6:7:18.06:258,18,0
chr10	79411996	.	T	TA	15205.69	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=1.619;DP=496;FS=5.245;HRun=2;HaplotypeScore=337.3414;InbreedingCoeff=0.6570;MQ=27.11;MQ0=0;MQRankSum=1.723;QD=30.72;ReadPosRankSum=0.979;VQSLOD=3.1282;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:20:47.96:595,48,0	1/1:1,7:8:21.02:278,21,0	0/0:1,0:1:3.01:0,3,37	./.	1/1:4,29:32:75.14:1028,75,0	1/1:2,17:18:42.10:570,42,0	1/1:4,25:29:71.99:987,72,0	1/1:5,25:29:55.74:780,56,0	1/1:2,13:12:27.09:388,27,0	1/1:1,31:32:81.27:1164,81,0	1/1:3,19:22:42.06:556,42,0	1/1:4,17:19:51.11:694,51,0	1/1:2,20:20:51.14:710,51,0	1/1:3,13:15:36.07:493,36,0	1/1:4,13:14:36.07:493,36,0	1/1:5,19:22:54.15:753,54,0	1/1:0,7:7:12.04:172,12,0	1/1:2,4:5:6.02:86,6,0	1/1:3,9:10:18.06:259,18,0	1/1:5,20:24:57.15:795,57,0	1/1:0,9:9:18.06:258,18,0	1/1:3,27:29:78.22:1096,78,0	1/1:0,21:21:57.06:748,57,0	1/1:1,12:12:21.07:301,21,0	1/1:4,22:24:51.17:732,51,0	1/1:4,14:17:42.11:581,42,0	1/1:2,11:13:30.10:431,30,0	1/1:0,6:6:18.06:258,18,0
chr10	79412018	.	G	GT	12973.45	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.635;DP=462;FS=10.096;HRun=2;HaplotypeScore=334.2894;InbreedingCoeff=0.7063;MQ=33.63;MQ0=0;MQRankSum=-1.810;QD=28.45;ReadPosRankSum=1.316;VQSLOD=1.8875;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:15:42.12:482,42,0	1/1:1,10:11:33.06:358,33,0	0/0:1,0:1:3.01:0,3,32	0/0:4,1:3:1.81:0,2,5	1/1:6,30:36:81.03:809,81,0	1/1:1,14:15:42.11:478,42,0	1/1:2,25:26:78.17:878,78,0	1/1:5,13:16:30.06:355,30,0	1/1:3,10:13:30.05:343,30,0	1/1:6,25:31:76.11:924,76,0	1/1:3,17:20:51.03:506,51,0	1/1:1,20:21:60.18:718,60,0	1/1:4,16:20:54.15:625,54,0	1/1:1,12:13:33.03:346,33,0	1/1:2,11:13:33.09:378,33,0	1/1:6,22:27:81.25:995,81,0	1/1:2,3:5:15:149,15,0	1/1:3,2:4:8.99:95,9,0	1/1:4,7:9:18.06:237,18,0	1/1:2,19:21:57.07:611,57,0	1/1:3,5:8:15.04:161,15,0	1/1:8,23:31:78.10:814,78,0	1/1:4,21:25:65.97:657,66,0	1/1:2,9:10:20.99:195,21,0	1/1:3,22:25:66.18:775,66,0	1/1:2,13:15:39.12:484,39,0	1/1:1,11:12:35.85:421,36,0	1/1:1,4:5:15.04:179,15,0
chr10	79412022	.	G	GT	17045.46	PASS	AB=0.833;AC=53;AF=0.946;AN=56;BaseQRankSum=1.470;DP=458;FS=9.720;HRun=1;HaplotypeScore=295.0174;InbreedingCoeff=0.4217;MQ=34.91;MQ0=1;MQRankSum=-2.443;QD=37.38;ReadPosRankSum=1.346;VQSLOD=2.3211;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:17:45.02:619,45,0	1/1:1,10:11:30.10:439,30,0	0/0:2,0:1:3.01:0,3,39	0/1:4,1:3:31.41:38,0,31	1/1:0,33:33:90.13:1266,90,0	1/1:1,14:14:42.14:628,42,0	1/1:4,25:28:75.20:1057,75,0	1/1:5,12:13:24.08:345,24,0	1/1:0,12:12:33.11:492,33,0	1/1:1,28:29:84.28:1248,84,0	1/1:2,19:21:57.02:774,57,0	1/1:1,19:20:57.19:838,57,0	1/1:1,17:18:51.14:738,51,0	1/1:1,12:13:36.05:490,36,0	1/1:3,11:14:33.11:493,33,0	1/1:1,28:28:81.18:1142,81,0	1/1:4,4:8:14.90:199,15,0	1/1:1,4:4:9.03:134,9,0	1/1:1,9:8:21.04:289,21,0	1/1:2,19:21:57.12:824,57,0	1/1:0,5:5:11.95:151,12,0	1/1:1,27:28:78.22:1140,78,0	1/1:1,25:26:72.20:1048,72,0	1/1:2,9:10:21.07:293,21,0	1/1:1,24:25:69.23:1031,69,0	1/1:4,12:16:42.10:596,42,0	1/1:2,11:13:39.11:555,39,0	1/1:0,4:4:12.04:179,12,0
chr10	79412152	.	TGCC	T	554	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-1.289;DP=460;FS=3.842;HRun=0;HaplotypeScore=312.0723;InbreedingCoeff=0.7483;MQ=68.99;MQ0=0;MQRankSum=-3.125;QD=13.51;ReadPosRankSum=-2.563;VQSLOD=2.7085;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:6.02:111,6,0	0/0:15,0:15:33.11:0,33,523	0/0:10,0:10:30.07:0,30,346	0/1:18,0:18:2.05:2,0,532	0/0:32,0:32:54.16:0,54,848	0/0:21,0:21:39.13:0,39,617	0/0:15,0:15:24.43:0,24,285	0/0:22,0:21:30.63:0,31,693	1/1:0,16:16:30.10:554,30,0	0/0:29,0:29:53.01:0,53,1022	0/0:23,0:22:42.10:0,42,631	0/0:14,0:14:30.10:0,30,452	0/0:12,0:12:30.09:0,30,447	0/0:13,0:13:24.08:0,24,380	0/0:10,0:10:18.06:0,18,279	0/0:17,0:17:33.11:0,33,516	0/0:9,0:9:15.01:0,15,204	0/0:5,0:5:9.92:0,10,140	0/0:11,0:11:26.52:0,27,364	0/0:40,0:40:81.22:0,81,1230	0/0:7,0:7:11.95:0,12,135	0/0:17,0:17:36.07:0,36,540	0/0:27,0:27:51.14:0,51,792	0/0:10,0:10:17.30:0,17,278	0/0:18,0:18:36.08:0,36,535	0/0:18,0:18:54.18:0,54,825	0/0:18,0:18:42.14:0,42,658	0/0:6,0:6:15.05:0,15,229
chr10	79412160	.	GA	G	10957.82	PASS	AB=1.000;AC=54;AF=0.964;AN=56;BaseQRankSum=3.435;DP=320;FS=1.524;HRun=1;HaplotypeScore=214.0389;InbreedingCoeff=-0.0522;MQ=80.32;MQ0=0;MQRankSum=-4.065;QD=34.24;ReadPosRankSum=4.108;VQSLOD=4.3764;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,3:4:6.02:84,6,0	1/1:0,12:12:33.10:443,33,0	0/1:10,0:12:58.50:58,0,76	0/1:13,0:16:22.49:157,0,22	1/1:1,19:20:48.14:633,48,0	1/1:0,13:13:36.12:501,36,0	1/1:0,8:8:21.07:291,21,0	1/1:0,12:12:36.12:501,36,0	1/1:0,10:10:30.10:413,30,0	1/1:1,19:20:57.19:795,57,0	1/1:0,20:19:42.12:547,42,0	1/1:0,8:8:24.08:334,24,0	1/1:0,9:9:27.09:376,27,0	1/1:0,11:11:27.09:369,27,0	1/1:0,7:7:15.05:209,15,0	1/1:0,9:9:27.09:375,27,0	1/1:0,6:6:15.05:209,15,0	1/1:1,4:5:10.49:165,10,0	1/1:0,6:6:18.06:251,18,0	1/1:1,28:29:75.24:1018,75,0	1/1:0,4:4:12.04:167,12,0	1/1:0,12:12:33.11:458,33,0	1/1:0,21:21:57.18:776,57,0	1/1:0,6:6:18.04:219,18,0	1/1:0,14:14:39.13:542,39,0	1/1:0,14:14:42.14:581,42,0	1/1:0,11:11:33.10:444,33,0	1/1:0,1:1:3.01:41,3,0
chr10	79412168	.	C	CT	5229.36	PASS	AB=1.000;AC=54;AF=0.964;AN=56;BaseQRankSum=-0.507;DP=338;FS=0.000;HRun=1;HaplotypeScore=239.7536;InbreedingCoeff=-0.0470;MQ=76.37;MQ0=0;MQRankSum=-3.492;QD=15.47;ReadPosRankSum=5.118;VQSLOD=4.7535;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,1:6:11.84:92,12,0	1/1:12,0:12:31.37:219,31,0	0/1:13,0:13:55.48:75,0,55	0/1:13,0:14:22.66:78,0,23	1/1:17,3:20:45.11:286,45,0	1/1:14,0:14:37.95:223,38,0	1/1:10,0:10:23.41:139,23,0	1/1:13,1:14:41.52:298,42,0	1/1:10,0:10:28.95:158,29,0	1/1:20,0:20:56.26:382,56,0	1/1:20,0:19:34.70:242,35,0	1/1:8,0:8:23.23:128,23,0	1/1:10,0:10:29.15:183,29,0	1/1:12,0:12:32.31:235,32,0	1/1:7,0:7:14.51:79,15,0	1/1:9,1:10:29.26:187,29,0	1/1:6,0:6:14.66:88,15,0	1/1:5,0:5:10.18:82,10,0	1/1:6,0:6:17.76:115,18,0	1/1:29,1:30:74.93:454,75,0	1/1:4,0:4:11.71:69,12,0	1/1:13,1:14:35.18:211,35,0	1/1:23,0:23:59.56:353,60,0	1/1:7,0:7:9.92:62,10,0	1/1:14,0:14:41.04:261,41,0	1/1:14,0:14:41.44:275,41,0	1/1:11,0:11:27.49:162,27,0	1/1:1,3:4:8.99:96,9,0
chr10	79412170	.	C	CA	6566.95	PASS	AB=0.813;AC=54;AF=0.964;AN=56;BaseQRankSum=6.290;DP=425;FS=3.550;HRun=1;HaplotypeScore=270.7748;InbreedingCoeff=-0.0425;MQ=71.96;MQ0=0;MQRankSum=-2.341;QD=15.45;ReadPosRankSum=7.927;VQSLOD=4.5504;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:12.98:115,13,0	1/1:13,0:13:31.10:222,31,0	0/1:10,5:15:99:103,0,100	0/1:12,1:14:17.70:113,0,18	1/1:22,0:22:45.12:281,45,0	1/1:17,0:17:36.94:216,37,0	1/1:14,0:14:24.88:163,25,0	1/1:30,0:30:80.29:650,80,0	1/1:10,0:10:28.19:135,28,0	1/1:25,0:25:72.55:528,73,0	1/1:23,0:22:35.74:276,36,0	1/1:9,0:9:25.62:126,26,0	1/1:13,0:13:29.37:200,29,0	1/1:12,0:12:31.64:217,32,0	1/1:11,0:11:16.78:105,17,0	1/1:18,0:18:46.11:304,46,0	1/1:7,0:7:17.43:108,17,0	1/1:6,0:6:17.80:134,18,0	1/1:9,0:9:26.72:205,27,0	1/1:36,0:36:75.59:492,76,0	1/1:8,0:8:23.52:156,24,0	1/1:18,0:18:42.46:283,42,0	1/1:27,0:27:62.67:392,63,0	1/1:7,0:7:11.27:59,11,0	1/1:16,0:16:42.62:300,43,0	1/1:19,0:19:56.31:424,56,0	1/1:14,0:13:30.16:154,30,0	1/1:4,0:4:9.02:107,9,0
chr10	79413176	.	AATG	A	14950.80	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=13.882;DP=677;FS=2.108;HRun=0;HaplotypeScore=114.6551;InbreedingCoeff=0.9539;MQ=76.10;MQ0=0;MQRankSum=-3.210;QD=30.57;ReadPosRankSum=3.120;VQSLOD=5.4052;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,18:23:51.17:727,51,0	1/1:1,1:2:3.01:43,3,0	0/0:26,0:26:36.08:0,36,612	0/0:26,0:26:45.10:0,45,802	1/1:7,31:38:87.26:1218,87,0	0/0:32,0:32:69.24:0,69,1397	0/0:17,0:17:36.12:0,36,729	1/1:15,25:40:72.21:987,72,0	1/1:5,10:15:30.10:428,30,0	1/1:6,27:33:84.24:1158,84,0	1/1:5,13:18:39.13:556,39,0	1/1:6,18:24:51.17:726,51,0	1/1:6,29:35:87.29:1239,87,0	1/1:6,15:21:36.12:513,36,0	1/1:4,20:24:54.18:770,54,0	1/1:4,20:24:54.18:770,54,0	0/0:19,0:19:45.15:0,45,908	1/1:1,11:12:27.09:381,27,0	1/1:6,16:22:48.13:658,48,0	1/1:9,42:51:99:1645,117,0	1/1:9,17:26:42.14:598,42,0	0/0:23,0:23:60.21:0,60,1210	0/0:23,0:23:69.24:0,69,1397	0/0:22,0:22:57.18:0,57,1118	1/1:1,20:21:57.15:783,57,0	1/1:6,15:21:45.15:641,45,0	1/1:5,26:31:72.24:1026,72,0	1/1:2,6:8:6.02:85,6,0
chr10	79413584	.	C	CAA	14690.85	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-4.829;DP=686;FS=0.000;HRun=9;HaplotypeScore=86.8989;InbreedingCoeff=0.9789;MQ=80.11;MQ0=3;MQRankSum=-1.432;QD=28.25;ReadPosRankSum=-1.120;VQSLOD=4.6610;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:21:37.43:128,37,0	1/1:0,11:13:35.60:499,36,0	0/0:18,0:19:6.76:0,7,215	0/0:16,0:16:15.33:0,15,143	1/1:5,35:43:99:1364,102,0	0/0:26,0:26:69.13:0,69,726	0/0:14,0:14:36.09:0,36,383	1/1:7,23:32:74.71:1069,75,0	1/1:4,0:24:47.41:163,47,0	1/1:2,28:32:90.28:1337,90,0	1/1:4,26:31:77.66:1110,78,0	1/1:1,0:23:44.92:154,45,0	1/1:2,0:25:54.44:186,54,0	1/1:2,0:20:37.43:128,37,0	1/1:3,29:32:72.24:1109,72,0	1/1:1,16:17:33.11:508,33,0	0/0:21,0:21:60.13:0,60,639	1/1:2,9:12:26.58:378,27,0	1/1:7,13:20:53.76:773,54,0	1/1:4,41:49:99:1763,126,0	1/1:2,21:25:53.15:756,53,0	0/0:30,0:30:78.15:0,78,830	0/0:20,0:20:57.13:0,57,606	0/0:20,0:20:57.11:0,57,599	1/1:4,26:31:74.74:1117,75,0	1/1:5,18:26:59.65:835,60,0	1/1:4,27:31:77.20:1120,77,0	1/1:1,6:7:14.54:193,15,0
chr10	79416142	.	T	TA	735.46	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.694;DP=582;FS=0.795;HRun=6;HaplotypeScore=52.9370;InbreedingCoeff=0.9923;MQ=78.87;MQ0=0;MQRankSum=-2.364;QD=28.29;ReadPosRankSum=0.283;VQSLOD=3.9772;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.09:0,66,660	0/0:11,0:11:33.07:0,33,331	0/0:12,0:12:26.98:0,27,256	0/0:18,0:18:41.94:0,42,405	0/0:23,0:23:51.08:0,51,512	0/0:26,0:26:75.10:0,75,745	0/0:9,0:9:27.06:0,27,275	0/0:37,0:37:90.18:0,90,908	0/0:19,0:19:45.07:0,45,445	0/0:22,0:22:63.13:0,63,637	0/0:23,0:23:69.11:0,69,683	0/0:17,0:17:39.06:0,39,391	0/0:35,0:35:90.17:0,90,909	0/0:21,0:21:60.12:0,60,605	0/0:28,0:28:81.16:0,81,813	0/0:19,0:19:51.11:0,51,520	0/0:20,0:20:37.21:0,37,530	0/0:18,0:18:48.07:0,48,478	0/0:15,0:15:42.10:0,42,428	0/0:31,0:31:87.12:0,87,847	0/0:11,0:11:27.06:0,27,275	0/0:12,0:12:36.08:0,36,367	0/0:16,0:16:48.10:0,48,483	0/0:21,0:21:57.13:0,57,581	1/1:2,24:26:66.21:830,66,0	0/0:26,0:26:78.16:0,78,787	0/0:36,0:36:90.17:0,90,904	0/0:7,0:7:21.02:0,21,204
chr10	79416243	.	C	CT	13059.16	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-11.690;DP=681;FS=11.573;HRun=8;HaplotypeScore=69.0370;InbreedingCoeff=0.9286;MQ=80.33;MQ0=2;MQRankSum=-1.358;QD=26.07;ReadPosRankSum=0.411;VQSLOD=4.8872;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:57.17:651,57,0	1/1:1,12:13:27.08:309,27,0	0/0:38,0:24:34.16:0,34,345	0/1:33,0:28:5.13:5,0,252	1/1:1,25:26:50.76:833,51,0	0/0:29,0:29:81.03:0,81,736	0/0:12,0:12:30:0,30,269	1/1:6,22:28:60.15:672,60,0	1/1:2,18:20:48.14:554,48,0	1/1:3,22:25:66.13:734,66,0	1/1:4,28:32:81.19:920,81,0	1/1:5,11:16:35.97:396,36,0	1/1:2,32:34:90.26:1033,90,0	1/1:4,17:21:39.11:446,39,0	1/1:2,32:34:87.26:1004,87,0	1/1:1,28:29:54.16:623,54,0	0/0:26,0:26:63.03:0,63,576	1/1:3,14:17:39.12:450,39,0	1/1:6,7:13:21.05:232,21,0	1/1:1,33:34:90.23:1024,90,0	1/1:0,6:6:18.05:208,18,0	0/0:28,0:28:69.02:0,69,631	0/0:31,0:31:87.03:0,87,790	0/0:16,0:16:42.02:0,42,384	1/1:8,16:24:69.18:777,69,0	1/1:4,29:33:87.26:1003,87,0	1/1:2,25:28:66.20:762,66,0	1/1:3,12:15:38.79:426,39,0
chr10	79416654	.	GGGTTATA	G	27263.87	PASS	AB=0.539;AC=34;AF=0.607;AN=56;BaseQRankSum=18.331;DP=703;FS=4.290;HRun=0;HaplotypeScore=185.4420;InbreedingCoeff=0.8628;MQ=74.28;MQ0=0;MQRankSum=-19.704;QD=62.68;ReadPosRankSum=1.352;VQSLOD=4.5681;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,166,6426	1/1:1,13:14:33.11:828,33,0	0/0:22,0:22:63.22:0,63,2321	0/0:22,0:22:66.23:0,66,2440	1/1:4,32:36:78.26:1848,78,0	0/0:36,0:36:99:0,108,4322	0/0:17,0:17:51.18:0,51,1954	1/1:4,25:29:75.21:1761,75,0	0/0:17,0:17:48.16:0,48,1930	1/1:0,18:18:54.14:1309,54,0	1/1:0,21:21:57.11:1319,57,0	1/1:2,27:29:66.23:1733,66,0	1/1:0,32:32:87.30:2239,87,0	1/1:2,23:25:57.20:1453,57,0	1/1:0,27:27:78.27:2044,78,0	1/1:0,31:31:90.20:2368,90,0	0/0:28,0:28:81.28:0,81,3269	0/1:3,12:15:6.64:834,0,7	1/1:4,14:18:42.14:1041,42,0	0/1:3,31:34:24.85:2262,0,25	1/1:2,19:21:42.14:941,42,0	0/0:20,0:20:57.20:0,57,2301	0/0:27,0:27:81.28:0,81,3245	0/0:23,0:23:69.22:0,69,2689	1/1:2,19:21:48.16:1182,48,0	1/1:1,22:23:63.22:1657,63,0	1/1:3,31:34:72.25:1893,72,0	1/1:0,7:7:21.07:553,21,0
chr10	79417041	.	CT	C	6189.69	PASS	AB=0.923;AC=29;AF=0.518;AN=56;BaseQRankSum=9.317;DP=565;FS=4.031;HRun=10;HaplotypeScore=61.1737;InbreedingCoeff=0.9319;MQ=74.71;MQ0=0;MQRankSum=-0.096;QD=19.53;ReadPosRankSum=0.296;VQSLOD=5.6498;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:65.99:0,66,696	1/1:1,10:11:23.99:208,24,0	0/0:16,0:16:22.60:0,23,201	0/0:10,0:9:5.05:0,5,133	1/1:2,26:28:68.96:599,69,0	0/0:18,0:19:53.95:0,54,566	0/1:10,1:12:2.16:2,0,189	1/1:6,26:32:77.97:677,78,0	0/0:13,0:14:32.87:0,33,337	1/1:6,16:22:50.97:442,51,0	1/1:6,18:24:23.80:436,24,0	0/0:17,0:17:51.14:0,51,564	0/0:19,0:20:47.95:0,48,505	0/0:22,0:22:56.16:0,56,589	1/1:2,26:28:71.98:625,72,0	1/1:2,17:19:47.87:417,48,0	0/0:20,0:21:53.97:0,54,570	1/1:3,12:15:29.99:260,30,0	1/1:11,12:23:35.95:309,36,0	1/1:4,29:33:80.97:703,81,0	1/1:0,4:4:12:104,12,0	0/0:15,0:17:41.95:0,42,446	0/0:20,0:20:54.15:0,54,597	0/0:12,0:12:30.07:0,30,324	0/0:30,2:32:29.12:0,29,777	1/1:3,27:30:80.98:703,81,0	1/1:2,22:24:62.98:547,63,0	1/1:3,9:12:18:156,18,0
chr10	79417393	.	AAG	A	2374.10	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.479;DP=724;FS=1.125;HRun=0;HaplotypeScore=99.6412;InbreedingCoeff=0.9997;MQ=84.40;MQ0=1;MQRankSum=-4.022;QD=43.96;ReadPosRankSum=3.448;VQSLOD=5.4230;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:96.33:1566,96,0	0/0:15,0:15:45.15:0,45,897	0/0:30,0:30:87.27:0,87,1683	0/0:18,0:18:54.19:0,54,1089	0/0:22,0:22:66.23:0,66,1341	0/0:21,0:21:63.22:0,63,1263	0/0:16,0:16:48.16:0,48,974	0/0:43,0:43:99:0,129,2537	1/1:0,20:20:57.19:930,57,0	0/0:31,0:31:93.32:0,93,1858	0/0:25,0:25:75.24:0,75,1454	0/0:32,0:32:96.33:0,96,1799	0/0:32,0:32:96.33:0,96,1815	0/0:27,0:27:78.22:0,78,1433	0/0:33,0:33:99:0,99,1995	0/0:31,0:31:90.31:0,90,1811	0/0:30,0:29:87.30:0,87,1761	0/0:16,0:16:48.14:0,48,936	0/0:22,0:22:66.23:0,66,1325	0/0:25,0:25:72.25:0,72,1462	0/0:30,0:30:90.31:0,90,1828	0/0:20,0:20:60.21:0,60,1218	0/0:34,0:34:99:0,102,2056	0/0:26,0:26:75.26:0,75,1507	0/0:20,0:20:60.21:0,60,1219	0/0:32,0:32:96.33:0,96,1951	0/0:29,0:29:87.30:0,87,1743	0/0:10,0:10:30.10:0,30,610
chr10	79417574	.	G	GGAGT	29658.51	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=4.668;DP=693;FS=14.601;HRun=0;HaplotypeScore=129.6137;InbreedingCoeff=0.9708;MQ=84.54;MQ0=3;MQRankSum=-8.021;QD=59.44;ReadPosRankSum=0.432;VQSLOD=6.0463;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,27:34:57.20:1503,57,0	1/1:1,12:13:36.12:949,36,0	0/0:27,0:27:66.17:0,66,1111	0/0:22,0:22:57.20:0,57,1032	1/1:3,22:26:57.20:1504,57,0	0/0:22,0:21:63.22:0,63,1141	0/0:24,0:24:69.24:0,69,1252	1/1:12,13:30:60.18:1373,60,0	1/1:3,19:23:54.19:1408,54,0	1/1:4,11:15:39.13:967,39,0	1/1:3,16:19:42.14:1107,42,0	1/1:5,20:26:69.24:1796,69,0	1/1:4,21:28:69.24:1800,69,0	1/1:4,24:29:69.11:1820,69,0	1/1:9,31:39:99:2703,105,0	1/1:6,21:28:53.90:1386,54,0	0/0:25,0:25:69.21:0,69,1237	1/1:1,10:11:24.08:633,24,0	1/1:12,12:26:54.19:1377,54,0	1/1:6,30:39:84.25:2151,84,0	1/1:3,17:20:45.15:1180,45,0	0/0:21,0:21:60.21:0,60,1104	0/0:21,0:21:63.22:0,63,1159	0/0:32,0:32:87.30:0,87,1601	1/1:3,20:24:54.19:1425,54,0	1/1:8,22:31:84.29:2126,84,0	1/1:2,30:31:90.31:2372,90,0	1/1:0,1:1:3.01:79,3,0
chr10	79417968	.	C	CTT	5295.77	PASS	AB=0.561;AC=38;AF=0.679;AN=56;BaseQRankSum=8.248;DP=565;FS=0.790;HRun=9;HaplotypeScore=86.1298;InbreedingCoeff=0.8264;MQ=76.90;MQ0=0;MQRankSum=-1.572;QD=12.73;ReadPosRankSum=1.836;VQSLOD=2.4121;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:17:37.43:128,37,0	1/1:1,0:9:17.47:60,17,0	0/0:18,0:19:10:0,10,188	0/0:10,0:10:9.89:0,10,93	1/1:2,1:25:50.42:209,50,0	0/0:21,0:21:54.13:0,54,575	0/0:13,0:13:39.08:0,39,406	1/1:7,0:35:62.34:261,62,0	1/1:2,0:14:27.92:95,28,0	0/1:4,0:24:8.19:114,0,8	1/1:2,1:27:31.70:222,32,0	1/1:2,22:24:48.16:732,48,0	1/1:3,19:23:50.66:747,51,0	1/1:1,12:13:39.13:586,39,0	1/1:3,0:18:34.93:120,35,0	1/1:3,0:17:32.44:111,32,0	0/0:31,0:31:84.17:0,84,886	1/1:2,0:17:29.94:103,30,0	1/1:5,0:15:23.02:96,23,0	1/1:8,0:28:21.33:151,21,0	0/1:4,0:15:33.02:55,0,33	0/0:19,0:19:54.10:0,54,559	0/0:23,0:23:59.01:0,59,629	0/0:13,0:13:39.10:0,39,415	1/1:1,25:28:69.23:1045,69,0	1/1:0,0:21:45.16:169,45,0	1/1:7,0:36:67.55:233,68,0	1/1:1,0:8:17.47:60,17,0
chr10	79418471	.	GC	G	20446.03	PASS	AB=0.923;AC=41;AF=0.732;AN=56;BaseQRankSum=14.955;DP=692;FS=3.388;HRun=1;HaplotypeScore=99.1756;InbreedingCoeff=0.8975;MQ=76.15;MQ0=0;MQRankSum=-1.623;QD=37.65;ReadPosRankSum=-0.596;VQSLOD=4.7510;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,49:49:99:1846,132,0	1/1:0,10:10:27.09:378,27,0	0/1:11,1:12:11.61:12,0,280	0/0:14,0:14:36.12:0,36,538	1/1:0,28:28:72.24:1002,72,0	0/0:20,0:20:57.16:0,57,857	0/0:24,0:24:72.25:0,72,1151	1/1:0,24:24:69.23:960,69,0	1/1:0,25:25:60.20:834,60,0	1/1:0,31:31:93.31:1298,93,0	1/1:0,20:20:57.19:797,57,0	1/1:0,34:34:99:1385,99,0	1/1:1,32:33:87.29:1205,87,0	1/1:0,21:21:48.16:671,48,0	1/1:0,34:34:96.32:1343,96,0	1/1:0,31:31:87.29:1217,87,0	0/0:21,0:21:63.20:0,63,984	1/1:0,20:20:60.20:839,60,0	1/1:0,19:19:57.15:758,57,0	1/1:0,27:27:75.25:1036,75,0	1/1:0,46:46:99:1846,132,0	0/0:20,0:20:60.20:0,60,957	0/0:19,0:19:57.19:0,57,909	0/0:31,0:31:93.30:0,93,1461	1/1:0,23:23:60.20:839,60,0	1/1:0,24:24:72.24:1007,72,0	1/1:0,27:27:78.26:1091,78,0	1/1:0,5:5:6.02:84,6,0
chr10	79418752	.	AT	A	885.55	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.006;DP=538;FS=2.844;HRun=2;HaplotypeScore=83.1237;InbreedingCoeff=0.9825;MQ=76.19;MQ0=0;MQRankSum=-0.522;QD=18.07;ReadPosRankSum=3.501;VQSLOD=4.0400;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,13:18:36.02:325,36,0	0/0:11,0:11:29.86:0,30,226	0/0:21,0:21:39.65:0,40,625	0/0:4,0:4:12.01:0,12,145	0/0:40,0:40:99:0,114,897	0/0:32,0:32:93.25:0,93,1290	0/0:11,0:11:30.07:0,30,392	0/0:26,0:26:62.87:0,63,433	1/1:2,13:15:39.02:352,39,0	0/0:19,0:19:47.32:0,47,325	0/0:28,0:28:68.73:0,69,539	0/0:15,0:15:38.84:0,39,305	0/0:23,0:23:59.77:0,60,464	0/0:22,0:22:53.79:0,54,406	0/0:17,0:17:38.81:0,39,296	0/0:9,0:9:20.88:0,21,160	0/0:22,0:22:60.12:0,60,812	0/0:18,0:18:47.80:0,48,373	0/0:18,0:18:44.58:0,45,323	0/0:24,1:25:32.66:0,33,404	0/0:8,0:8:20.91:0,21,160	0/0:21,0:21:60.19:0,60,877	0/0:20,0:20:60.17:0,60,854	0/0:11,0:11:33.11:0,33,493	1/1:3,13:16:39.02:352,39,0	0/0:18,0:18:47.53:0,48,340	0/0:42,0:41:99:0,112,872	0/0:8,0:8:17.94:0,18,137
chr10	79419417	.	CT	C	594.23	PASS	AB=0.859;AC=8;AF=0.143;AN=56;BaseQRankSum=-3.711;DP=573;FS=4.573;HRun=14;HaplotypeScore=135.9002;InbreedingCoeff=0.4025;MQ=69.09;MQ0=0;MQRankSum=1.450;QD=4.87;ReadPosRankSum=-3.542;VQSLOD=1.1605;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:5,7:13:2.01:124,0,2	0/0:8,0:8:11.19:0,11,52	0/1:24,1:14:28.13:28,0,51	0/0:17,0:11:7.99:0,8,81	0/0:36,0:36:44.45:0,44,301	0/0:21,0:23:53.70:0,54,431	0/0:13,0:13:27.03:0,27,251	0/0:36,0:36:19.40:0,19,206	1/1:8,11:20:37.55:249,38,0	0/0:27,0:27:22.65:0,23,161	0/0:22,0:22:29.94:0,30,192	0/0:19,0:19:36.37:0,36,171	0/1:21,0:21:4.16:4,0,85	0/0:28,0:28:44.77:0,45,210	0/0:23,0:23:29.50:0,29,189	0/0:20,1:21:15.99:0,16,137	0/1:20,4:24:22.16:22,0,381	0/0:10,0:10:11.19:0,11,52	0/0:13,0:13:10.47:0,10,90	0/0:29,0:29:43.25:0,43,238	0/0:9,0:9:8.11:0,8,54	0/0:14,2:17:1.85:0,2,214	0/0:24,1:25:43.21:0,43,488	0/0:11,1:12:3.43:0,3,169	1/1:4,14:19:46.58:309,47,0	0/0:18,0:18:31.52:0,32,164	0/0:39,0:39:67.15:0,67,315	0/0:6,0:6:8.39:0,8,39
chr10	79419421	.	T	TTTTC	16871.45	PASS	AB=0.512;AC=33;AF=0.589;AN=56;BaseQRankSum=-1.026;DP=572;FS=16.531;HRun=0;HaplotypeScore=107.4226;InbreedingCoeff=0.9283;MQ=67.82;MQ0=0;MQRankSum=-3.853;QD=46.10;ReadPosRankSum=4.136;VQSLOD=4.6853;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:36.08:0,36,445	1/1:0,8:9:12.01:282,12,0	0/0:25,0:12:23.65:0,24,246	0/0:18,0:12:6.45:0,6,169	1/1:2,34:36:84.14:1727,84,0	0/0:24,0:24:68.49:0,68,856	0/0:12,0:12:30.09:0,30,513	1/1:4,32:37:99:1695,99,0	0/0:19,0:19:56.49:0,56,637	1/1:3,20:25:65.87:1148,66,0	1/1:1,22:24:59.89:1235,60,0	1/1:2,18:21:39.10:917,39,0	1/1:2,18:20:36.12:797,36,0	1/1:2,24:26:48.15:1129,48,0	1/1:1,21:23:54.17:1241,54,0	0/1:1,20:22:0.64:809,0,1	0/0:24,0:24:65.96:0,66,953	1/1:0,8:10:12.04:282,12,0	1/1:1,11:12:33.06:673,33,0	1/1:0,28:29:78:1520,78,0	1/1:2,9:11:21.05:434,21,0	0/0:16,0:16:45.07:0,45,647	0/0:25,0:25:70.04:0,70,880	0/0:11,0:11:30.07:0,30,445	0/0:19,0:19:53.19:0,53,649	1/1:2,18:20:56.81:1100,57,0	1/1:4,30:36:72.18:1669,72,0	1/1:0,5:5:9.03:212,9,0
chr10	79419692	.	AT	A	8816.09	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=16.102;DP=550;FS=1.546;HRun=7;HaplotypeScore=67.3579;InbreedingCoeff=0.9892;MQ=69.03;MQ0=0;MQRankSum=-0.382;QD=24.29;ReadPosRankSum=1.594;VQSLOD=5.3152;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:17.50:0,17,831	1/1:2,4:6:12.03:122,12,0	0/0:9,0:8:18.02:0,18,201	0/0:8,0:8:21.05:0,21,251	1/1:2,31:33:84.08:821,84,0	0/0:23,0:23:60.15:0,60,716	0/0:8,0:8:24.08:0,24,302	1/1:7,32:39:96.16:952,96,0	0/0:21,0:21:60.19:0,60,754	1/1:2,19:21:54.08:535,54,0	1/1:1,26:27:60.05:589,60,0	1/1:2,11:13:33.07:337,33,0	1/1:2,20:22:51.11:520,51,0	1/1:1,15:16:39.09:398,39,0	1/1:2,23:25:57.12:582,57,0	1/1:2,22:24:57.13:582,57,0	0/0:30,0:30:87.25:0,87,1065	1/1:0,14:14:39.09:398,39,0	1/1:1,14:15:42.10:429,42,0	1/1:2,28:30:81.18:825,81,0	1/1:0,13:13:30.07:306,30,0	0/0:15,0:15:45.12:0,45,539	0/0:19,0:19:54.17:0,54,679	0/0:8,0:8:21.07:0,21,264	0/0:19,0:19:54.17:0,54,679	1/1:4,18:22:54.08:535,54,0	1/1:4,28:32:72.16:734,72,0	1/1:1,10:11:15.03:153,15,0
chr10	79420472	.	GTGTGTGTGTGTGAGTGTGTGTGTA	G	634.60	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=4.123;DP=587;FS=4.399;HRun=0;HaplotypeScore=297.7581;InbreedingCoeff=0.0153;MQ=46.52;MQ0=21;MQRankSum=-3.025;QD=3.34;ReadPosRankSum=-6.304;VQSLOD=0.8592;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:30.10:0,30,1047	0/0:14,0:14:14.79:0,15,494	0/0:23,0:5:14.88:0,15,446	0/0:31,0:6:17.39:0,17,425	0/0:12,0:11:9.03:0,9,216	0/0:34,0:34:78.74:0,79,5265	0/0:22,0:20:48.64:0,49,2717	0/1:26,0:26:99:155,0,905	0/0:12,0:12:20.45:0,20,355	0/1:18,0:17:46.09:46,0,1217	0/0:7,0:7:11.73:0,12,298	0/1:31,0:31:31.50:32,0,1780	0/1:30,0:30:79.78:80,0,1585	0/0:21,0:20:31.26:0,31,1198	0/0:19,0:19:24.58:0,25,917	0/0:13,0:13:12.04:0,12,343	0/0:35,0:35:71.14:0,71,4995	0/0:23,0:22:26.71:0,27,593	0/0:6,0:6:15.05:0,15,523	0/0:17,0:17:15.05:0,15,392	0/1:19,0:17:9.86:10,0,225	0/0:14,0:14:30.10:0,30,1892	0/0:12,0:11:30.03:0,30,1184	0/0:30,0:30:78.24:0,78,4546	1/1:5,20:25:5.88:377,6,0	0/1:27,0:26:57.03:57,0,1405	0/1:14,0:11:17.20:17,0,303	0/0:13,0:11:21.07:0,21,604
chr10	79420482	.	GTGAGTGTGTGTGTA	G	2085.68	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=6.922;DP=540;FS=3.117;HRun=0;HaplotypeScore=200.3512;InbreedingCoeff=-0.1280;MQ=47.13;MQ0=15;MQRankSum=-3.806;QD=8.76;ReadPosRankSum=-3.276;VQSLOD=2.3438;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:17.13:0,17,259	0/0:13,0:13:8.85:0,9,220	0/0:27,0:11:28.19:0,28,536	0/0:38,0:13:9.08:0,9,356	0/0:12,0:11:4.58:0,5,70	0/0:36,0:36:87.28:0,87,3409	0/0:24,0:22:54.19:0,54,2004	0/1:23,0:23:50.58:471,0,51	1/1:6,6:12:12.65:381,13,0	0/1:15,0:14:99:136,0,165	0/0:7,0:7:5.62:0,6,122	0/1:28,0:28:99:165,0,287	0/1:22,0:22:99:170,0,386	0/1:20,0:19:90.92:91,0,224	0/1:14,0:14:17.33:17,0,133	0/0:10,0:10:6.02:0,6,74	0/0:34,0:34:63.43:0,63,2698	0/1:19,0:18:40.31:40,0,182	0/1:6,0:6:66.33:66,0,72	0/0:12,0:12:6.02:0,6,78	0/1:13,0:12:64.33:76,0,64	0/0:14,0:14:32.90:0,33,1209	0/0:7,0:6:15.05:0,15,569	0/0:31,0:31:81.28:0,81,3005	1/1:22,0:22:7.73:203,8,0	0/1:24,0:23:99:371,0,211	0/1:9,0:7:30.09:30,0,49	0/1:11,0:9:30.86:31,0,109
chr10	79420490	.	GTGTGTA	G	3915.67	PASS	AB=0.919;AC=22;AF=0.393;AN=56;BaseQRankSum=9.137;DP=550;FS=2.052;HRun=0;HaplotypeScore=145.9991;InbreedingCoeff=0.3772;MQ=52.05;MQ0=9;MQRankSum=-2.261;QD=16.45;ReadPosRankSum=0.304;VQSLOD=3.1834;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,2:32:5.88:0,6,52	0/0:16,0:16:8.41:0,8,54	0/0:32,0:15:45.14:0,45,965	0/0:47,0:21:59.49:0,59,1111	0/0:13,0:13:2.84:0,3,14	0/0:38,0:38:90.29:0,90,2358	0/0:22,0:21:54.17:0,54,1273	1/1:36,0:36:98.52:1020,99,0	1/1:10,0:10:11.04:214,11,0	1/1:17,1:17:35.89:490,36,0	0/0:7,0:7:2.72:0,3,24	0/1:19,0:19:93.60:181,0,94	0/1:21,0:21:99:282,0,105	0/1:16,0:15:33.77:156,0,34	1/1:11,2:13:8.99:157,9,0	1/1:11,0:11:2.98:21,3,0	0/0:30,0:30:69.80:0,70,1926	0/1:9,10:18:59.02:69,0,59	1/1:9,1:10:5.40:244,5,0	0/0:14,0:14:2.90:0,3,16	0/0:12,0:11:0.94:0,1,24	0/0:13,0:13:33.11:0,33,921	0/0:8,0:8:24.08:0,24,532	0/0:28,0:28:82.42:0,82,2163	1/1:22,0:22:6.71:90,7,0	1/1:25,2:27:60.13:822,60,0	0/1:10,0:9:8.56:30,0,9	0/1:5,1:5:8.47:139,0,8
chr10	79420491	.	T	TGCGCGC	3960.25	PASS	AB=0.986;AC=17;AF=0.304;AN=56;BaseQRankSum=6.991;DP=549;FS=2.853;HRun=0;HaplotypeScore=156.4054;InbreedingCoeff=0.3254;MQ=52.39;MQ0=9;MQRankSum=-1.716;QD=18.86;ReadPosRankSum=1.830;VQSLOD=3.5374;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:7.52:0,8,51	0/0:16,0:16:9.22:0,9,69	0/0:33,0:16:42.14:0,42,922	0/0:48,0:22:60.20:0,60,1369	0/0:13,0:13:2.97:0,3,20	0/0:37,0:37:86.38:0,86,2015	0/0:22,0:21:50.92:0,51,1191	1/1:34,0:34:92.47:1180,92,0	0/1:10,0:10:20.17:20,0,46	1/1:18,0:17:28.48:401,28,0	0/0:6,0:6:2.99:0,3,25	0/1:18,0:18:2.45:298,0,2	0/1:21,0:21:37.09:381,0,37	0/1:16,0:15:23.33:175,0,23	0/0:13,0:13:7.97:0,8,36	0/0:11,0:11:2.88:0,3,15	0/0:30,0:30:72.48:0,72,1737	0/1:17,2:18:31.77:122,0,32	1/1:10,0:10:3.65:368,4,0	0/0:14,0:14:3.01:0,3,37	0/0:6,8:15:6.58:0,7,61	0/0:13,0:13:33.01:0,33,801	0/0:8,0:8:24.05:0,24,439	0/0:27,0:27:78.25:0,78,1871	0/1:22,0:22:1.48:1,0,4	1/1:26,0:26:38.37:817,38,0	0/1:10,0:9:13.95:67,0,14	1/1:6,0:5:8.03:130,8,0
chr10	79420492	.	GTGTA	G	4180.45	PASS	AB=0.882;AC=32;AF=0.571;AN=56;BaseQRankSum=10.491;DP=550;FS=2.048;HRun=0;HaplotypeScore=129.1865;InbreedingCoeff=0.4391;MQ=52.69;MQ0=9;MQRankSum=-3.566;QD=12.71;ReadPosRankSum=-0.159;VQSLOD=3.4700;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,24:31:13.99:14,0,14	1/1:2,13:15:2.86:21,3,0	0/0:35,0:18:54.15:0,54,960	0/0:48,0:22:62.50:0,63,1045	1/1:2,11:13:2.97:20,3,0	0/0:37,0:37:89.92:0,90,1949	0/0:21,0:20:51.16:0,51,1189	1/1:0,34:34:99:1026,102,0	1/1:10,0:10:12.01:161,12,0	1/1:17,1:17:47.38:552,47,0	0/1:1,5:6:0:0,0,0	0/1:18,0:18:35.36:199,0,35	0/1:22,0:22:44.26:303,0,44	0/1:16,0:15:6.74:180,0,7	1/1:2,10:12:9.03:150,9,0	1/1:1,10:11:3.01:59,3,0	0/0:30,0:30:54.10:0,54,1585	0/1:17,1:17:4.09:112,0,4	1/1:11,0:11:26.98:265,27,0	1/1:0,14:14:2.96:19,3,0	0/1:17,0:16:2.16:2,0,2	0/0:13,0:13:33.10:0,33,781	0/0:8,0:8:23.73:0,24,414	0/0:29,0:29:87.20:0,87,1974	0/1:22,0:22:4.16:59,0,4	1/1:2,23:25:66.11:841,66,0	1/1:1,9:9:5.98:56,6,0	1/1:6,0:5:11.98:140,12,0
chr10	79420494	.	GTA	G	3915.90	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=11.155;DP=541;FS=2.077;HRun=0;HaplotypeScore=113.4375;InbreedingCoeff=0.7291;MQ=55.11;MQ0=8;MQRankSum=-3.108;QD=12.43;ReadPosRankSum=0.830;VQSLOD=3.4139;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:0:0,0,0	0/1:13,0:13:0:1,0,0	0/0:36,0:19:54.10:0,54,766	0/0:52,0:26:65.12:0,65,901	0/1:12,0:12:0:0,0,0	0/0:36,0:36:83.14:0,83,1331	0/0:20,0:20:54.11:0,54,863	1/1:34,0:34:98.86:1001,99,0	1/1:10,0:10:11.87:87,12,0	1/1:2,16:18:48.01:527,48,0	0/1:5,0:5:0:0,0,0	1/1:11,6:17:8.11:263,8,0	1/1:11,10:21:24.35:358,24,0	1/1:11,4:14:17.77:206,18,0	1/1:12,0:12:9.02:91,9,0	1/1:10,0:11:3:28,3,0	0/0:30,0:30:55.65:0,56,1202	1/1:17,0:16:13.08:117,13,0	1/1:1,9:10:26.97:254,27,0	0/1:14,0:14:0:0,0,0	0/1:15,0:15:1.29:11,0,1	0/0:14,0:14:36.07:0,36,612	0/0:8,0:8:21:0,21,300	0/0:30,0:30:90.19:0,90,1535	1/1:22,0:22:3.47:26,3,0	1/1:25,0:25:65.98:781,66,0	1/1:10,0:9:3.01:36,3,0	1/1:2,3:4:11.98:127,12,0
chr10	79420789	.	AATGT	A	1813.85	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=8.543;DP=734;FS=2.852;HRun=0;HaplotypeScore=117.0873;InbreedingCoeff=0.9464;MQ=70.48;MQ0=7;MQRankSum=2.436;QD=16.20;ReadPosRankSum=0.665;VQSLOD=3.0151;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:15.05:0,15,248	0/0:8,0:8:15.05:0,15,332	./.	./.	0/0:27,0:27:48.15:0,48,1049	0/0:29,0:29:42.14:0,42,987	0/0:19,0:19:33.11:0,33,754	0/0:45,0:45:30.06:0,30,586	0/0:16,0:16:24.08:0,24,397	0/0:20,0:19:33.11:0,33,745	0/0:18,0:18:30.10:0,30,706	1/1:14,14:28:21.07:326,21,0	1/1:17,25:41:47.97:742,48,0	1/1:18,24:42:57.19:885,57,0	0/0:43,0:42:69.17:0,69,1507	0/0:27,0:27:66.21:0,66,1446	0/0:19,0:18:33.09:0,33,676	0/0:23,0:23:27.04:0,27,559	0/0:27,0:27:18.06:0,18,424	0/0:34,0:34:45.15:0,45,1046	0/0:42,0:42:75.26:0,75,1713	0/0:24,0:24:33.11:0,33,763	0/0:14,0:14:21.05:0,21,434	0/0:17,0:17:27.05:0,27,585	0/0:3,0:23:6.36:0,6,198	0/0:29,0:29:51.16:0,51,1115	0/0:38,1:39:31.67:0,32,1669	0/0:13,0:12:24.08:0,24,564
chr10	79420792	.	G	GTATA	1233.23	PASS	AB=0.981;AC=6;AF=0.107;AN=56;BaseQRankSum=3.002;DP=725;FS=0.819;HRun=0;HaplotypeScore=119.8742;InbreedingCoeff=0.7337;MQ=68.83;MQ0=7;MQRankSum=-0.991;QD=15.23;ReadPosRankSum=2.134;VQSLOD=3.4733;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,11:16:15.52:405,16,0	0/0:7,0:7:18.05:0,18,301	0/0:25,0:13:23.43:0,23,261	0/0:25,0:20:45.74:0,46,471	0/0:26,0:26:69.10:0,69,1014	0/0:26,0:26:75.09:0,75,1042	0/0:22,0:22:58.67:0,59,835	0/0:44,0:43:99:0,120,1184	1/1:0,16:16:24.08:646,24,0	0/0:19,0:18:54.04:0,54,755	0/0:18,0:18:45.08:0,45,691	0/0:27,0:27:56.05:0,56,526	0/0:42,0:41:97.61:0,98,960	0/0:40,0:40:99:0,99,1020	0/0:42,0:42:99:0,117,1555	0/1:25,1:26:2.64:3,0,1158	0/0:19,0:18:54.05:0,54,725	0/0:21,0:21:55.59:0,56,594	0/0:27,0:27:74.71:0,75,803	0/0:34,0:34:90.06:0,90,1180	0/0:42,0:42:99:0,120,1694	0/0:25,0:25:66.06:0,66,874	0/0:14,0:14:36:0,36,450	0/0:17,0:17:48.04:0,48,648	0/1:23,0:23:3.93:308,0,4	0/0:29,0:29:75.17:0,75,1115	0/0:38,0:38:99:0,108,1617	0/0:15,0:14:36.04:0,36,545
chr10	79421201	.	G	GA	864.35	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.581;DP=714;FS=7.469;HRun=8;HaplotypeScore=67.0960;InbreedingCoeff=0.9958;MQ=88.79;MQ0=0;MQRankSum=-2.561;QD=27.88;ReadPosRankSum=1.460;VQSLOD=4.1632;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:25:58.07:0,58,500	0/0:8,0:8:24.01:0,24,220	0/0:29,0:29:50.81:0,51,445	0/0:26,0:26:74.35:0,74,627	0/0:47,0:47:99:0,129,1175	0/0:28,0:28:84.03:0,84,764	0/0:16,0:16:39.01:0,39,357	0/0:30,0:29:78.03:0,78,711	0/0:24,0:24:69.04:0,69,631	0/0:31,0:31:72.03:0,72,658	0/0:20,0:20:57.03:0,57,522	0/0:18,0:18:51.01:0,51,459	0/0:32,0:32:90.04:0,90,823	0/0:28,0:28:71.97:0,72,639	0/0:26,0:26:69.04:0,69,631	0/0:32,0:32:90.03:0,90,819	0/0:32,0:32:81.04:0,81,741	0/0:19,0:19:57.03:0,57,521	0/0:19,0:18:57.03:0,57,521	0/0:34,0:34:92.93:0,93,823	0/0:17,0:17:48.01:0,48,434	0/0:28,0:28:75.02:0,75,681	0/0:23,0:23:60.02:0,60,549	0/0:19,0:19:45.02:0,45,412	1/1:4,27:31:84.24:959,84,0	0/0:18,0:19:53.06:0,53,470	0/0:42,0:42:99:0,114,1043	0/0:11,0:11:24.01:0,24,220
chr10	79421928	.	CA	C	2877.74	PASS	AB=0.756;AC=34;AF=0.607;AN=56;BaseQRankSum=4.892;DP=615;FS=1.889;HRun=15;HaplotypeScore=75.0359;InbreedingCoeff=0.3017;MQ=77.13;MQ0=1;MQRankSum=-0.500;QD=6.08;ReadPosRankSum=4.220;VQSLOD=2.9072;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:23:19.89:0,20,99	1/1:1,10:12:28.60:177,29,0	0/1:28,2:22:38.78:39,0,48	0/1:25,0:18:5.79:6,0,36	1/1:3,25:32:48.96:404,49,0	0/1:19,3:22:12.84:13,0,263	0/1:13,4:17:21.86:22,0,184	0/1:10,13:23:38.59:156,0,39	0/0:6,0:22:28.70:0,29,156	0/1:9,12:23:11.11:168,0,11	1/1:5,13:21:35.41:207,35,0	1/1:2,1:16:19.21:66,19,0	1/1:4,0:20:28.50:82,28,0	1/1:3,0:15:21.28:72,21,0	0/1:11,9:23:2.57:90,0,3	0/1:4,15:19:36.35:137,0,36	0/0:21,1:25:28.19:0,28,323	1/1:5,8:16:26.75:152,27,0	1/1:5,12:20:19.56:210,20,0	0/1:13,17:31:2.76:225,0,3	1/1:1,7:10:22.69:140,23,0	0/1:17,2:20:6.39:6,0,222	0/0:27,4:32:7.82:0,8,264	0/0:16,1:18:16.53:0,17,250	0/0:8,0:22:37.35:0,37,210	1/1:10,16:27:45.40:292,45,0	1/1:8,24:34:28.16:277,28,0	1/1:5,7:15:3.41:126,3,0
chr10	79422375	.	G	GA	2036.82	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.523;DP=551;FS=0.499;HRun=6;HaplotypeScore=87.4590;InbreedingCoeff=0.9825;MQ=82.17;MQ0=2;MQRankSum=-1.721;QD=31.34;ReadPosRankSum=0.616;VQSLOD=3.6960;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,1025	0/0:7,0:7:18.03:0,18,178	0/0:41,0:32:63.31:0,63,559	0/0:28,0:21:37.95:0,38,334	0/0:16,0:16:23.95:0,24,334	0/0:21,0:21:60.12:0,60,604	0/0:20,0:20:57.11:0,57,574	0/0:17,0:17:41.75:0,42,414	0/0:13,0:13:39.09:0,39,397	0/0:13,0:14:38.10:0,38,361	0/0:19,0:19:41.99:0,42,407	1/1:0,26:26:72.23:906,72,0	1/1:2,14:16:39.12:482,39,0	1/1:0,23:23:63.20:792,63,0	0/0:24,0:25:49.16:0,49,558	0/0:26,0:26:41.35:0,41,577	0/0:26,0:26:75.17:0,75,765	0/0:12,0:12:27.06:0,27,275	0/0:14,0:14:24.01:0,24,234	0/0:17,0:17:21.65:0,22,313	0/0:19,0:19:33.04:0,33,328	0/0:15,0:15:30.05:0,30,299	0/0:18,0:18:51.11:0,51,520	0/0:11,0:11:30.07:0,30,306	0/0:15,0:15:42.06:0,42,419	0/0:25,0:25:60.13:0,60,612	0/0:23,0:23:57.09:0,57,565	0/0:5,0:5:12.01:0,12,110
chr10	79422384	.	A	AGG	8144.56	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-10.812;DP=572;FS=7.776;HRun=7;HaplotypeScore=87.8089;InbreedingCoeff=0.9885;MQ=78.76;MQ0=2;MQRankSum=-0.825;QD=31.81;ReadPosRankSum=-1.113;VQSLOD=4.2277;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:90.25:0,90,1046	1/1:1,6:7:15.05:246,15,0	0/0:38,0:29:40.54:0,41,610	0/0:22,0:18:11.93:0,12,307	1/1:3,17:22:42.01:593,42,0	0/0:24,0:24:54.09:0,54,614	0/0:22,0:22:60.12:0,60,665	1/1:5,14:20:39.52:558,40,0	0/0:15,0:15:33.07:0,33,373	1/1:5,12:18:30.07:460,30,0	1/1:3,15:18:39.13:640,39,0	0/0:27,0:27:66.18:0,66,769	0/0:16,0:16:39.05:0,39,443	0/0:25,0:25:63.17:0,63,734	1/1:3,20:24:51.17:835,51,0	1/1:4,19:25:51.17:817,51,0	0/0:25,0:25:75.01:0,75,851	1/1:3,9:12:24.08:394,24,0	1/1:3,10:14:30.10:488,30,0	1/1:3,12:17:39.08:587,39,0	1/1:1,20:21:42.14:689,42,0	0/0:16,0:16:45.13:0,45,524	0/0:20,0:20:54.15:0,54,629	0/0:10,0:10:24.06:0,24,278	0/0:17,0:17:45.12:0,45,524	1/1:5,16:24:48.09:708,48,0	1/1:1,25:28:57.14:934,57,0	1/1:1,5:6:12.04:197,12,0
chr10	79422822	.	C	CA	13211.31	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-17.779;DP=683;FS=10.177;HRun=3;HaplotypeScore=62.8153;InbreedingCoeff=0.9996;MQ=87.37;MQ0=0;MQRankSum=-2.587;QD=38.07;ReadPosRankSum=0.494;VQSLOD=4.6120;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.25:0,90,1067	1/1:0,13:13:36.12:504,36,0	0/0:19,0:19:33.03:0,33,465	0/0:27,0:28:71.27:0,71,763	1/1:1,30:31:87.29:1218,87,0	0/0:22,0:22:66.19:0,66,780	0/0:27,0:27:81.25:0,81,972	1/1:1,25:26:75.24:1031,75,0	0/0:18,0:18:54.17:0,54,648	1/1:0,27:27:81.27:1132,81,0	1/1:0,28:28:84.24:1146,84,0	0/0:24,0:24:69.21:0,69,825	0/0:20,0:20:60.18:0,60,711	0/0:35,0:35:99:0,105,1245	1/1:2,24:26:63.21:882,63,0	1/1:0,24:24:66.22:924,66,0	0/0:28,0:28:81.22:0,81,958	1/1:0,18:18:45.15:627,45,0	1/1:1,20:21:60.18:803,60,0	1/1:1,34:35:90.30:1254,90,0	1/1:2,16:18:48.16:672,48,0	0/0:21,0:21:60.18:0,60,719	0/0:36,0:36:99:0,105,1248	0/0:13,0:13:36.11:0,36,432	0/0:14,0:14:36.11:0,36,432	1/1:2,29:31:87.29:1213,87,0	1/1:2,38:41:99:1469,105,0	1/1:0,8:8:24.08:336,24,0
chr10	79427484	.	T	TAA	7335.77	PASS	AB=0.875;AC=29;AF=0.518;AN=56;BaseQRankSum=4.194;DP=531;FS=3.780;HRun=10;HaplotypeScore=81.3638;InbreedingCoeff=0.9158;MQ=73.08;MQ0=0;MQRankSum=1.880;QD=26.97;ReadPosRankSum=-4.014;VQSLOD=4.1621;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:45.06:0,45,458	1/1:1,4:5:9.03:127,9,0	0/0:15,0:14:18.02:0,18,190	0/1:6,0:7:12.31:12,0,50	1/1:1,19:21:54.18:797,54,0	0/0:25,0:25:60.12:0,60,610	0/0:22,0:22:60.12:0,60,610	1/1:16,21:39:68.40:882,68,0	0/0:13,0:13:33.04:0,33,336	1/1:9,3:23:45:489,45,0	1/1:7,0:21:37.32:387,37,0	0/0:18,0:18:42.07:0,42,427	0/0:29,0:29:57.01:0,57,571	0/0:25,0:25:60.08:0,60,610	1/1:6,15:21:45.15:672,45,0	1/1:2,17:19:42.14:626,42,0	0/0:16,0:16:39.07:0,39,397	1/1:3,7:11:18.06:268,18,0	1/1:5,15:22:47.58:609,48,0	1/1:4,19:24:56.59:746,57,0	1/1:1,9:9:15.05:223,15,0	0/0:13,0:13:33.05:0,33,336	0/0:25,0:25:60.09:0,60,610	0/0:19,0:20:47.83:0,48,470	0/0:18,0:19:50.84:0,51,500	1/1:4,21:29:65.64:886,66,0	1/1:1,14:16:32.60:456,33,0	1/1:1,3:4:12.01:155,12,0
chr10	79430137	.	ATCT	A	10763.36	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=13.389;DP=546;FS=1.514;HRun=0;HaplotypeScore=80.8435;InbreedingCoeff=0.9968;MQ=90.50;MQ0=0;MQRankSum=-4.130;QD=39.43;ReadPosRankSum=1.511;VQSLOD=5.5712;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.24:0,69,1509	1/1:0,10:9:24.08:380,24,0	0/0:24,0:24:51.17:0,51,1017	0/0:23,0:23:51.17:0,51,1065	1/1:4,29:33:69.23:1092,69,0	0/0:29,0:29:84.29:0,84,1814	0/0:13,0:13:39.13:0,39,853	1/1:3,23:26:69.20:1059,69,0	0/0:16,0:16:45.14:0,45,907	1/1:2,19:21:57.19:904,57,0	1/1:0,16:16:42.14:664,42,0	0/0:17,0:17:51.18:0,51,1115	0/0:18,0:18:54.19:0,54,1178	0/0:18,0:18:51.18:0,51,1115	1/1:0,22:22:57.19:902,57,0	1/1:1,25:26:72.25:1141,72,0	0/0:25,0:25:72.25:0,72,1572	1/1:2,7:9:15.05:238,15,0	1/1:3,11:14:33.11:523,33,0	1/1:2,19:21:51.04:775,51,0	1/1:0,14:14:30.10:476,30,0	0/0:14,0:14:42.14:0,42,918	0/0:13,0:13:36.12:0,36,787	0/0:13,0:13:33.11:0,33,721	0/0:25,0:25:72.25:0,72,1574	1/1:1,21:22:63.21:991,63,0	1/1:1,29:30:81.28:1284,81,0	1/1:2,7:9:21.07:333,21,0
chr10	79430426	.	T	TA	372.43	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.764;DP=652;FS=0.884;HRun=10;HaplotypeScore=78.3581;InbreedingCoeff=0.9558;MQ=59.63;MQ0=2;MQRankSum=0.332;QD=19.60;ReadPosRankSum=-2.857;VQSLOD=3.2639;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:95.81:0,96,867	0/0:10,0:10:23.96:0,24,197	0/0:12,0:10:20.64:0,21,157	0/0:13,0:12:19.16:0,19,169	0/0:27,0:28:61.95:0,62,499	0/0:30,0:27:72.99:0,73,578	0/0:23,0:22:41.17:0,41,340	0/0:31,0:31:48.62:0,49,475	0/0:17,0:17:43.01:0,43,332	0/0:30,0:28:55.94:0,56,449	0/0:20,0:20:52.96:0,53,424	0/0:23,0:25:51.76:0,52,404	0/0:19,0:18:41.94:0,42,344	0/0:22,0:21:49.98:0,50,400	0/0:30,0:29:70.92:0,71,572	0/0:26,0:25:64.91:0,65,516	0/0:27,0:26:74.91:0,75,616	0/0:21,0:21:56.90:0,57,463	0/0:20,0:19:38.92:0,39,320	0/0:18,0:18:38.90:0,39,317	0/0:14,0:14:29.94:0,30,246	0/0:28,0:28:68.16:0,68,562	0/0:20,0:21:52.02:0,52,406	0/0:28,0:28:80.89:0,81,662	1/1:3,16:19:45.07:467,45,0	0/0:25,0:23:59.89:0,60,487	0/0:34,0:31:54.94:0,55,427	0/0:8,0:8:11.74:0,12,87
chr10	79430978	.	C	CT	10985.31	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=-12.529;DP=592;FS=1.171;HRun=9;HaplotypeScore=52.5200;InbreedingCoeff=0.8812;MQ=66.63;MQ0=0;MQRankSum=1.748;QD=25.08;ReadPosRankSum=-1.383;VQSLOD=5.0296;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:28:60.16:663,60,0	1/1:0,9:9:24.06:265,24,0	0/1:9,0:9:2.53:3,0,94	0/1:4,0:3:0.74:1,0,21	1/1:3,29:34:57.96:835,58,0	0/0:27,0:27:77.97:0,78,673	0/0:29,0:29:74.98:0,75,651	1/1:8,32:40:93.20:999,93,0	1/1:2,13:15:33.09:365,33,0	1/1:3,22:25:66.18:729,66,0	1/1:3,10:13:30.04:318,30,0	1/1:0,16:16:45.12:498,45,0	1/1:2,24:26:34.11:603,34,0	1/1:0,20:20:60.16:664,60,0	1/1:2,14:16:39.11:431,39,0	1/1:5,17:22:51.14:564,51,0	0/0:27,0:27:59.93:0,60,518	1/1:2,10:12:27.07:299,27,0	1/1:6,11:17:33.07:356,33,0	1/1:8,18:26:54.07:571,54,0	1/1:6,16:22:45.12:497,45,0	0/0:23,0:23:65.94:0,66,566	0/0:26,0:26:56.91:0,57,489	0/0:22,0:22:62.96:0,63,547	1/1:1,21:23:56.99:612,57,0	1/1:2,23:26:75.19:816,75,0	1/1:6,25:31:72.19:796,72,0	1/1:1,3:4:9.02:100,9,0
chr10	79433537	.	G	GTTGTTTGT	32741.48	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-14.842;DP=767;FS=15.158;HRun=0;HaplotypeScore=157.3420;InbreedingCoeff=0.9600;MQ=76.79;MQ0=0;MQRankSum=-15.051;QD=65.75;ReadPosRankSum=0.008;VQSLOD=4.0778;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:54.09:0,54,1130	1/1:2,6:8:12.04:503,12,0	0/0:35,0:35:57.14:0,57,1453	0/0:33,0:33:59.18:0,59,1347	1/1:10,27:38:51.07:1633,51,0	0/0:43,0:43:99:0,108,2627	0/0:21,0:21:57.20:0,57,1467	1/1:7,38:48:99:3187,123,0	0/0:31,0:31:66.23:0,66,1709	1/1:7,22:32:75.24:2477,75,0	1/1:5,23:30:57.19:1877,57,0	1/1:3,24:28:50.87:2151,51,0	1/1:6,25:33:57.20:2264,57,0	1/1:9,20:31:45.15:1755,45,0	1/1:10,29:43:69.24:2915,69,0	1/1:3,25:32:63.22:2663,63,0	0/0:18,0:18:48.16:0,48,1227	1/1:3,7:10:9.03:381,9,0	1/1:7,12:21:45.13:1371,45,0	1/1:3,17:24:53.99:1676,54,0	1/1:6,5:12:12.04:465,12,0	0/0:30,0:30:72.21:0,72,1793	0/0:22,0:22:57.20:0,57,1474	0/0:13,0:13:24.08:0,24,625	1/1:6,19:26:45.15:1891,45,0	1/1:5,18:25:60.20:1839,60,0	1/1:9,34:46:87.05:3563,87,0	1/1:5,6:11:3.95:129,4,0
chr10	79435045	.	TCCCTTC	T	7028.41	PASS	AB=0.667;AC=27;AF=0.482;AN=56;BaseQRankSum=5.826;DP=434;FS=58.979;HRun=0;HaplotypeScore=103.0723;InbreedingCoeff=0.7959;MQ=71.51;MQ0=5;MQRankSum=-6.085;QD=39.05;ReadPosRankSum=1.906;VQSLOD=2.5849;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:49.40:0,49,1333	0/1:4,4:8:18.17:186,0,18	0/0:41,0:26:39.85:0,40,994	0/0:56,0:33:14.89:0,15,1236	1/1:0,20:20:54.18:1126,54,0	0/0:14,0:14:18.06:0,18,554	0/0:9,0:9:21.05:0,21,517	1/1:9,13:21:39.09:813,39,0	0/0:12,0:12:18.06:0,18,488	1/1:4,14:18:39.12:810,39,0	1/1:4,10:14:27.09:567,27,0	0/0:12,0:11:12.04:0,12,375	0/0:16,0:16:9.03:0,9,260	0/0:10,0:9:9.03:0,9,262	1/1:4,10:14:9.03:198,9,0	1/1:1,6:7:9.03:198,9,0	0/0:10,0:10:24.08:0,24,628	1/1:1,10:11:15.05:303,15,0	1/1:6,5:11:15.05:328,15,0	1/1:4,13:17:32.51:788,33,0	1/1:1,4:5:3.01:66,3,0	0/0:16,0:16:20.81:0,21,619	0/0:10,0:9:18.06:0,18,578	0/0:8,0:8:5.98:0,6,111	0/0:14,0:13:1.55:0,2,4	1/1:3,17:20:51.16:1080,51,0	1/1:0,11:11:24.08:499,24,0	1/1:1,1:2:3.01:66,3,0
chr10	79435088	.	TTCTCTTATCTTATCG	T	4747.98	PASS	AB=1.000;AC=46;AF=0.885;AN=52;BaseQRankSum=-3.656;DP=427;FS=47.142;HRun=0;HaplotypeScore=161.5472;InbreedingCoeff=0.3816;MQ=86.03;MQ0=12;MQRankSum=-4.159;QD=18.69;ReadPosRankSum=3.371;VQSLOD=2.1940;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:13:35.18:444,35,0	1/1:3,0:3:1.82:5,2,0	0/0:60,0:20:17.18:0,17,195	0/0:100,0:50:14.39:0,14,785	1/1:14,0:14:30.10:312,30,0	0/1:14,0:14:17.61:18,0,18	1/1:9,0:9:8.10:169,8,0	1/1:13,0:13:32.99:505,33,0	1/1:1,5:5:3.01:58,3,0	1/1:11,0:11:26.99:399,27,0	1/1:10,0:10:27:333,27,0	1/1:12,0:11:2.90:16,3,0	1/1:15,0:15:3.01:35,3,0	./.	1/1:11,0:10:3.89:150,4,0	1/1:9,0:8:15.05:289,15,0	1/1:7,0:7:9.41:146,9,0	1/1:9,0:9:8.90:164,9,0	1/1:8,0:8:21.10:161,21,0	1/1:10,0:10:21.05:308,21,0	./.	0/1:15,0:15:2.37:21,0,2	1/1:9,0:8:12.04:182,12,0	1/1:0,7:7:5.93:71,6,0	1/1:16,0:14:6.02:135,6,0	1/1:19,0:19:11.71:512,12,0	1/1:10,0:10:5.16:151,5,0	1/1:3,0:3:9.03:163,9,0
chr10	79435093	.	TTATCTTATCG	T	6337.50	PASS	AB=0.902;AC=49;AF=0.942;AN=52;BaseQRankSum=-4.448;DP=401;FS=40.517;HRun=0;HaplotypeScore=129.5267;InbreedingCoeff=0.3534;MQ=92.91;MQ0=9;MQRankSum=-4.755;QD=22.24;ReadPosRankSum=5.014;VQSLOD=2.4568;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:35.90:461,36,0	1/1:2,0:2:1.82:5,2,0	0/1:49,0:19:12.35:12,0,181	0/0:104,0:59:13.80:0,14,782	1/1:12,0:12:30.52:397,31,0	1/1:15,0:15:11.81:78,12,0	1/1:8,0:8:16.86:241,17,0	1/1:11,0:11:32.99:516,33,0	1/1:5,0:4:3.01:58,3,0	1/1:10,0:10:27.09:513,27,0	1/1:10,0:10:27.08:436,27,0	1/1:0,10:9:3.01:56,3,0	1/1:0,15:15:3.01:74,3,0	./.	1/1:9,0:8:12.04:201,12,0	1/1:6,3:8:18.06:442,18,0	1/1:6,0:6:16.50:227,16,0	1/1:7,0:7:14.76:199,15,0	1/1:7,0:7:18.65:242,19,0	1/1:8,0:8:21.07:352,21,0	./.	1/1:2,12:14:12.04:153,12,0	1/1:3,4:6:14.88:231,15,0	1/1:7,0:7:5.93:71,6,0	1/1:3,13:14:6.02:133,6,0	1/1:17,0:17:48.04:814,48,0	1/1:8,0:8:15.05:249,15,0	1/1:3,0:3:9.03:176,9,0
chr10	79435098	.	TTATCG	T	4627.84	PASS	AB=1.000;AC=47;AF=0.940;AN=50;BaseQRankSum=-2.897;DP=395;FS=29.276;HRun=0;HaplotypeScore=120.3845;InbreedingCoeff=0.3350;MQ=94.48;MQ0=12;MQRankSum=-4.547;QD=16.59;ReadPosRankSum=5.954;VQSLOD=2.4997;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:29.89:307,30,0	./.	0/1:59,0:20:13.15:13,0,130	0/0:106,0:63:24:0,24,538	1/1:10,1:11:24.91:266,25,0	1/1:0,14:14:9.03:115,9,0	1/1:8,0:8:15.05:187,15,0	1/1:10,0:10:24.05:309,24,0	1/1:5,0:4:3.01:39,3,0	1/1:9,1:10:30.03:390,30,0	1/1:8,2:10:26.67:321,27,0	1/1:10,0:9:3.01:38,3,0	1/1:15,0:15:3.01:38,3,0	./.	1/1:6,1:6:12.04:169,12,0	1/1:9,0:8:18.06:239,18,0	1/1:6,0:6:14.53:166,15,0	1/1:9,0:9:23.66:213,24,0	1/1:5,0:5:12.04:166,12,0	1/1:8,1:9:22.61:253,23,0	./.	1/1:12,1:13:12.04:147,12,0	1/1:6,0:5:12.04:146,12,0	1/1:7,0:7:3.01:37,3,0	1/1:14,2:14:6.02:93,6,0	1/1:11,4:15:42.14:646,42,0	1/1:6,1:7:15.05:209,15,0	1/1:3,0:3:9.03:120,9,0
chr10	79435141	.	T	TCC	1228.87	PASS	AB=0.826;AC=20;AF=0.417;AN=48;BaseQRankSum=-1.861;DP=295;FS=7.991;HRun=2;HaplotypeScore=91.6561;InbreedingCoeff=0.2868;MQ=80.58;MQ0=10;MQRankSum=-3.236;QD=9.45;ReadPosRankSum=1.218;VQSLOD=0.2965;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:18.60:0,19,167	./.	0/1:54,0:21:52.70:53,0,213	0/0:81,0:38:1.94:0,2,296	1/1:3,2:5:2.22:7,2,0	0/0:10,0:10:3.01:0,3,44	0/0:7,0:8:11.31:0,11,69	0/1:11,5:14:99:277,0,106	0/0:5,0:4:6.02:0,6,83	1/1:4,5:9:19.62:320,20,0	1/1:1,2:3:1.36:3,1,0	./.	0/0:8,0:8:12:0,12,148	0/0:6,0:5:3.01:0,3,44	1/1:1,2:2:2.68:55,3,0	1/1:3,5:7:15.26:197,15,0	0/0:4,0:4:8.86:0,9,89	0/1:6,1:7:24.80:69,0,25	0/1:2,2:4:40.13:96,0,40	1/1:2,4:6:2.68:55,3,0	./.	./.	0/0:6,0:5:4.79:0,5,25	0/0:6,0:6:2.95:0,3,19	0/0:6,0:4:5.50:0,6,42	1/1:10,3:12:15.48:187,15,0	0/0:1,0:1:0:0,0,0	1/1:0,1:1:3.01:56,3,0
chr10	79437044	.	TATAA	T	298.29	PASS	AC=2;AF=0.040;AN=50;BaseQRankSum=1.720;DP=299;FS=1.360;HRun=0;HaplotypeScore=51.9104;InbreedingCoeff=0.5267;MQ=71.15;MQ0=0;MQRankSum=1.780;QD=12.43;ReadPosRankSum=1.173;VQSLOD=2.4281;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:19:42.57:0,43,886	0/0:5,0:5:6.02:0,6,76	./.	0/0:6,0:5:6.02:0,6,91	0/0:9,0:9:14.99:0,15,158	0/0:21,0:21:54.19:0,54,1313	0/0:5,0:5:8.99:0,9,169	0/0:42,0:38:57.40:0,57,793	0/0:7,0:7:18.06:0,18,423	0/0:8,0:8:8.89:0,9,89	0/0:9,0:9:9.02:0,9,126	0/0:10,0:10:18.06:0,18,423	0/0:7,0:7:18.06:0,18,423	0/0:9,0:9:12.04:0,12,273	0/0:9,0:9:18.06:0,18,285	0/0:8,0:8:11.95:0,12,116	0/0:16,0:16:39.13:0,39,940	0/0:10,0:10:24.01:0,24,295	0/0:12,0:11:15.05:0,15,261	./.	0/0:3,0:3:3.01:0,3,37	./.	0/0:13,0:13:21.06:0,21,389	0/0:5,0:5:9.03:0,9,195	1/1:7,17:24:24.08:390,24,0	0/0:11,0:11:12.03:0,12,171	0/0:8,0:8:11.96:0,12,144	0/0:9,0:10:23.05:0,23,238
chr10	79437062	.	T	TA	1172.77	PASS	AB=0.821;AC=13;AF=0.232;AN=56;BaseQRankSum=-5.573;DP=276;FS=9.670;HRun=3;HaplotypeScore=28.4549;InbreedingCoeff=-0.2987;MQ=61.69;MQ0=0;MQRankSum=-2.971;QD=8.50;ReadPosRankSum=-0.356;VQSLOD=-0.3295;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:45.14:0,45,557	0/0:3,0:3:9.01:0,9,98	0/1:3,0:3:5.98:6,0,31	0/1:5,0:4:0.37:0,0,66	0/1:6,2:8:22.03:22,0,200	0/0:19,0:19:57.17:0,57,694	0/0:6,0:6:18.06:0,18,223	0/1:23,19:38:99:555,0,653	0/0:9,0:9:24.05:0,24,273	0/1:7,0:7:5.64:6,0,200	0/1:2,2:4:62.29:74,0,62	0/0:9,0:9:27.08:0,27,334	0/0:9,0:9:27.08:0,27,335	0/0:5,0:5:15.05:0,15,186	0/1:5,4:9:99:145,0,157	0/1:5,1:6:25.03:25,0,167	0/0:16,0:16:48.15:0,48,594	0/1:8,4:12:99:139,0,199	0/1:9,4:12:99:139,0,227	0/0:3,0:3:6.02:0,6,74	0/0:3,0:3:6.02:0,6,74	0/0:2,0:2:6.02:0,6,74	0/0:8,0:8:24.08:0,24,297	0/0:5,0:5:15.05:0,15,185	0/0:21,0:21:34.99:0,35,279	0/1:7,1:8:19.08:19,0,224	0/1:6,2:8:65.22:65,0,150	0/1:9,4:13:99:122,0,238
chr10	79437806	.	C	CAT	1742.94	PASS	AB=0.889;AC=24;AF=0.522;AN=46;BaseQRankSum=-0.332;DP=306;FS=0.629;HRun=0;HaplotypeScore=56.7943;InbreedingCoeff=0.5842;MQ=77.16;MQ0=3;MQRankSum=-1.815;QD=11.17;ReadPosRankSum=-3.560;VQSLOD=2.7180;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:27:42.61:0,43,210	./.	0/1:9,0:6:0.04:0,0,0	0/1:19,0:12:15.05:18,0,15	0/1:8,0:8:0:0,0,0	0/0:20,0:20:45.14:0,45,550	0/0:12,0:12:21.06:0,21,256	1/1:26,0:22:41.24:332,41,0	0/0:4,0:15:22.89:0,23,135	1/1:6,0:6:2.80:13,3,0	./.	1/1:5,8:13:18.06:292,18,0	1/1:4,15:19:39.13:619,39,0	0/1:10,12:21:6.57:408,0,7	1/1:2,0:2:3:25,3,0	0/0:1,0:2:2.84:0,3,14	0/0:27,0:27:66.19:0,66,794	1/1:3,0:4:9:78,9,0	./.	1/1:5,0:5:2.99:24,3,0	./.	0/0:10,0:10:21.07:0,21,257	0/0:16,0:17:30.09:0,30,367	0/0:6,0:6:9.03:0,9,110	1/1:4,0:3:5.96:47,6,0	1/1:9,0:9:5.90:41,6,0	1/1:9,0:9:1.82:5,2,0	./.
chr10	79440030	.	TGAGAGAGAGAGAGAGA	T	11724.95	PASS	AB=0.690;AC=26;AF=0.464;AN=56;BaseQRankSum=8.701;DP=585;FS=0.495;HRun=0;HaplotypeScore=227.4891;InbreedingCoeff=0.7555;MQ=64.97;MQ0=15;MQRankSum=-6.162;QD=43.27;ReadPosRankSum=2.980;VQSLOD=3.9993;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:27:3.01:0,3,122	1/1:2,7:9:12.04:533,12,0	0/0:38,0:23:5.25:0,5,68	0/0:51,0:20:9:0,9,175	1/1:13,20:33:36.11:1350,36,0	0/0:24,0:26:51.18:0,51,3054	0/0:17,0:22:39.13:0,39,2411	1/1:11,12:23:36.10:609,36,0	0/0:3,0:14:6.90:0,7,312	1/1:6,10:16:26.80:710,27,0	1/1:10,18:28:39.13:1470,39,0	0/0:17,0:16:15.05:0,15,646	0/0:18,0:15:21.07:0,21,640	0/0:15,0:15:17.31:0,17,710	1/1:11,14:23:29.94:1229,30,0	1/1:7,16:23:27.09:1170,27,0	0/0:23,0:25:48.16:0,48,3006	0/1:3,1:6:64.58:338,0,65	1/1:9,5:14:15.05:508,15,0	1/1:10,11:21:24.08:1063,24,0	1/1:10,6:17:9.03:278,9,0	0/0:15,0:16:30.10:0,30,1580	0/0:10,0:10:27.09:0,27,1476	0/0:21,0:21:45.15:0,45,2814	0/0:13,0:13:3.68:0,4,308	1/1:8,11:19:27.09:1016,27,0	1/1:11,16:26:24.45:1065,24,0	0/1:6,4:9:33.25:387,0,33
chr10	79442563	.	GA	G	5311.46	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=7.931;DP=301;FS=6.675;HRun=5;HaplotypeScore=29.3136;InbreedingCoeff=0.9154;MQ=78.09;MQ0=0;MQRankSum=-1.308;QD=29.67;ReadPosRankSum=1.504;VQSLOD=4.3271;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:33.10:0,33,432	1/1:0,9:9:27.08:306,27,0	0/0:8,0:8:21.04:0,21,265	0/0:10,0:10:24:0,24,272	1/1:0,15:15:42.12:476,42,0	0/0:11,0:11:33.09:0,33,431	0/0:7,0:7:21.07:0,21,285	1/1:2,24:26:69.14:746,69,0	0/0:9,0:9:27.09:0,27,367	1/1:0,16:16:48.14:544,48,0	1/1:0,8:8:24.07:272,24,0	0/0:8,0:8:21.07:0,21,285	0/0:10,0:10:27.08:0,27,351	0/0:12,0:12:36.11:0,36,473	1/1:1,5:6:12.03:136,12,0	1/1:0,7:7:18.05:204,18,0	0/0:19,0:19:38.92:0,39,529	1/1:1,11:12:27.08:305,27,0	1/1:0,13:13:39.10:434,39,0	1/1:0,16:16:48.14:542,48,0	1/1:0,5:5:6.02:68,6,0	0/0:2,0:2:6.02:0,6,81	0/0:1,0:1:3.01:0,3,41	0/0:1,0:1:2.96:0,3,19	0/0:12,0:12:36.08:0,36,468	1/1:1,12:14:39.10:431,39,0	1/1:2,17:19:48.14:544,48,0	1/1:2,11:13:27.08:305,27,0
chr10	79443342	.	AT	A	1554.94	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=8.369;DP=558;FS=10.512;HRun=4;HaplotypeScore=57.0498;InbreedingCoeff=0.6842;MQ=81.35;MQ0=0;MQRankSum=1.385;QD=23.21;ReadPosRankSum=0.712;VQSLOD=1.9434;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:34:90.28:1080,90,0	0/0:13,0:13:36.12:0,36,504	0/1:15,0:15:27.98:28,0,106	0/0:10,0:13:7.75:0,8,127	0/0:21,0:21:60.20:0,60,840	0/0:22,0:22:66.21:0,66,907	0/0:21,0:21:60.19:0,60,823	0/0:29,0:30:66.19:0,66,867	1/1:0,18:18:48.15:576,48,0	0/0:14,0:14:36.11:0,36,487	0/0:19,0:19:54.16:0,54,725	0/0:20,0:20:60.20:0,60,840	0/0:25,0:25:75.21:0,75,1013	0/0:23,0:23:66.21:0,66,907	0/0:25,0:25:72.24:0,72,1008	0/0:22,0:22:63.21:0,63,882	0/0:23,0:23:69.20:0,69,946	0/0:4,0:4:9.01:0,9,108	0/0:21,0:21:48.16:0,48,672	0/0:16,0:16:45.14:0,45,608	0/0:32,0:32:81.27:0,81,1133	0/0:12,0:12:30.10:0,30,413	0/0:16,0:16:45.14:0,45,613	0/0:29,0:29:87.28:0,87,1202	0/0:21,0:21:63.19:0,63,863	0/0:25,0:25:69.22:0,69,937	0/0:23,0:23:66.21:0,66,907	0/0:1,0:1:3.01:0,3,42
chr10	79444380	.	CTTCTTTGT	C	2427.04	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=9.319;DP=680;FS=4.095;HRun=0;HaplotypeScore=173.7921;InbreedingCoeff=0.8321;MQ=68.14;MQ0=1;MQRankSum=-9.045;QD=21.29;ReadPosRankSum=-0.785;VQSLOD=2.8026;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,22:33:42.14:998,42,0	0/0:9,0:9:24.08:0,24,896	0/1:35,0:27:39.43:39,0,818	0/0:28,0:22:42.58:0,43,1191	0/0:28,0:28:48.16:0,48,1914	0/0:25,0:25:45.14:0,45,1774	0/0:24,0:24:45.15:0,45,1771	0/0:24,0:24:30.09:0,30,1053	1/1:7,11:18:21.07:538,21,0	0/0:20,0:20:54.19:0,54,2146	0/0:19,0:19:45.15:0,45,1835	0/0:17,0:17:30.10:0,30,1185	0/0:25,0:25:54.17:0,54,1877	0/0:23,0:23:45.15:0,45,1697	0/0:29,0:28:57.19:0,57,2201	0/0:37,0:37:78.27:0,78,3185	0/0:30,0:30:78.24:0,78,2976	0/0:19,0:20:45.15:0,45,1691	0/0:24,0:24:42.14:0,42,1444	0/0:34,0:34:87.28:0,87,3391	0/0:14,0:14:33.11:0,33,1127	0/0:16,0:16:39.13:0,39,1474	0/0:29,0:29:63.22:0,63,2510	0/0:27,0:26:60.21:0,60,2321	1/1:9,19:28:39.13:999,39,0	0/0:31,0:31:63.22:0,63,2571	0/0:21,0:21:54.19:0,54,2112	0/0:12,0:12:18.06:0,18,750
chr10	79445966	.	CTG	C	287.30	PASS	AB=0.957;AC=16;AF=0.308;AN=52;BaseQRankSum=0.604;DP=697;FS=0.000;HRun=0;HaplotypeScore=99.7649;InbreedingCoeff=0.1664;MQ=64.50;MQ0=14;MQRankSum=0.514;QD=1.02;ReadPosRankSum=-0.075;VQSLOD=1.6110;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:10.80:0,11,142	0/0:11,0:11:12.03:0,12,150	./.	./.	0/1:20,6:27:32.70:54,0,33	0/1:22,0:22:47.65:48,0,103	0/1:15,0:16:27.72:28,0,225	0/0:29,0:28:5.98:0,6,57	0/0:20,0:33:23.04:0,23,205	0/1:19,0:19:1.42:1,0,224	0/0:18,0:26:30.04:0,30,348	1/1:14,10:24:5.10:57,5,0	1/1:22,9:33:8.72:97,9,0	1/1:12,5:17:3.01:33,3,0	0/1:26,0:36:12.04:12,0,103	0/0:16,0:28:24.01:0,24,245	0/1:26,3:29:11.45:11,0,233	0/0:11,0:11:15.04:0,15,193	0/0:18,0:18:12.04:0,12,164	0/0:19,0:24:12.01:0,12,119	0/0:59,0:58:63.07:0,63,726	0/0:14,0:14:8.68:0,9,77	0/1:21,1:22:11.47:11,0,216	0/1:19,0:18:48.80:49,0,117	1/1:7,0:17:8.52:42,9,0	0/0:17,0:16:18.05:0,18,226	0/0:24,0:28:18.18:0,18,345	0/0:3,0:3:6.02:0,6,82
chr10	79446171	.	AC	A	1724.35	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.423;DP=635;FS=1.186;HRun=1;HaplotypeScore=61.8406;InbreedingCoeff=0.9927;MQ=70.58;MQ0=1;MQRankSum=-2.167;QD=31.35;ReadPosRankSum=1.221;VQSLOD=3.3564;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:90.30:1259,90,0	0/0:13,0:13:39.13:0,39,623	0/0:19,0:19:39.76:0,40,655	0/0:10,0:10:23.75:0,24,329	0/0:32,0:32:93.32:0,93,1476	0/0:30,0:30:90.31:0,90,1438	0/0:19,0:19:57.19:0,57,901	0/0:40,0:40:99:0,120,1898	1/1:0,21:21:42.14:587,42,0	0/0:36,0:36:99:0,108,1719	0/0:13,0:13:39.13:0,39,623	0/0:27,0:27:81.27:0,81,1270	0/0:25,0:25:75.26:0,75,1188	0/0:14,0:14:42.13:0,42,647	0/0:33,0:33:99:0,99,1549	0/0:26,1:26:36.30:0,36,1147	0/0:12,0:12:36.12:0,36,575	0/0:6,0:6:18.06:0,18,287	0/0:16,0:15:45.15:0,45,691	0/0:23,0:23:69.24:0,69,1102	0/0:22,0:22:66.23:0,66,1055	0/0:28,0:28:84.27:0,84,1320	0/0:21,0:21:63.21:0,63,1007	0/0:21,0:21:63.21:0,63,1007	0/0:24,0:24:72.25:0,72,1151	0/0:22,0:22:23.36:0,23,910	0/0:36,0:35:99:0,108,1697	0/0:11,0:11:26.68:0,27,431
chr10	79446415	.	A	AG	1219.31	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.160;DP=637;FS=0.000;HRun=7;HaplotypeScore=63.9538;InbreedingCoeff=0.9876;MQ=69.02;MQ0=1;MQRankSum=-3.570;QD=22.17;ReadPosRankSum=0.613;VQSLOD=3.1258;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,31:36:66.20:797,66,0	0/0:8,0:8:21.03:0,21,203	0/0:15,0:12:14.78:0,15,178	0/0:28,0:26:57.03:0,57,531	0/0:16,0:16:39.06:0,39,376	0/0:18,0:18:48.06:0,48,457	0/0:21,0:21:54.08:0,54,521	0/0:14,0:14:36.03:0,36,337	1/1:3,16:19:45.14:544,45,0	0/0:29,0:29:66.09:0,66,634	0/0:23,0:23:54.06:0,54,516	0/0:28,0:28:75.11:0,75,724	0/0:21,0:21:54.08:0,54,521	0/0:32,0:32:87.13:0,87,840	0/0:32,0:32:90.13:0,90,862	0/0:24,1:25:32.84:0,33,593	0/0:38,0:38:96.13:0,96,921	0/0:11,0:11:30.05:0,30,290	0/0:14,0:14:33.04:0,33,318	0/0:19,0:19:42.05:0,42,405	0/0:35,0:35:87.13:0,87,840	0/0:20,0:20:51.07:0,51,486	0/0:21,0:21:48.07:0,48,464	0/0:29,0:29:81.13:0,81,780	0/0:22,0:22:54.07:0,54,520	0/0:25,0:25:72.10:0,72,690	0/0:29,0:29:81.13:0,81,782	0/0:8,0:8:24.04:0,24,232
chr10	79446520	.	TA	T	1908.42	PASS	AB=0.917;AC=15;AF=0.268;AN=56;BaseQRankSum=5.703;DP=639;FS=12.044;HRun=12;HaplotypeScore=106.8132;InbreedingCoeff=0.7008;MQ=72.00;MQ0=1;MQRankSum=-0.270;QD=9.31;ReadPosRankSum=0.351;VQSLOD=1.4228;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:38:61.66:181,62,0	0/1:12,0:12:3.57:4,0,127	0/1:31,0:28:34.10:34,0,223	0/0:15,0:15:13.19:0,13,251	0/0:25,1:26:11.98:0,12,306	0/0:22,0:23:59.92:0,60,583	0/0:13,0:15:12.32:0,12,275	0/0:24,0:24:17.70:0,18,209	1/1:2,0:24:30.55:88,31,0	0/0:25,1:26:12.73:0,13,252	0/0:17,0:17:18.68:0,19,179	1/1:3,18:21:56.16:426,56,0	1/1:3,19:22:50.80:394,51,0	1/1:7,26:35:89.60:654,90,0	0/0:28,0:28:69.07:0,69,368	0/0:25,0:25:54.66:0,55,288	0/0:28,2:30:31.69:0,32,684	0/0:16,0:16:29.80:0,30,169	0/0:16,0:16:29.30:0,29,169	0/0:29,0:29:28.12:0,28,316	0/0:14,0:14:19.09:0,19,108	0/0:29,0:29:78.08:0,78,763	0/0:19,1:22:20.49:0,20,355	0/0:18,3:21:1.64:0,2,380	1/1:4,14:18:38.84:302,39,0	0/0:23,1:24:23.13:0,23,255	0/0:34,0:34:59.87:0,60,406	0/1:2,1:3:14.44:14,0,22
chr10	79447026	.	CT	C	1966.26	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.982;DP=424;FS=47.466;HRun=2;HaplotypeScore=37.7694;InbreedingCoeff=0.9927;MQ=80.20;MQ0=0;MQRankSum=-1.985;QD=34.50;ReadPosRankSum=2.132;VQSLOD=0.3950;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:36.12:467,36,0	0/0:5,0:5:15.05:0,15,225	0/0:13,0:13:39.11:0,39,542	0/0:9,0:9:27.07:0,27,378	0/0:16,0:16:48.16:0,48,718	0/0:15,0:15:45.15:0,45,675	0/0:15,0:15:45.14:0,45,653	0/0:31,0:31:93.31:0,93,1377	1/1:0,15:15:45.15:584,45,0	0/0:27,0:27:81.27:0,81,1214	0/0:11,0:11:33.11:0,33,495	1/1:0,10:10:30.10:389,30,0	1/1:0,11:11:30.10:389,30,0	1/1:0,8:8:24.08:312,24,0	0/0:14,0:14:42.14:0,42,630	0/0:18,0:18:54.18:0,54,808	0/0:29,0:29:87.29:0,87,1298	0/0:6,0:6:18.06:0,18,270	0/0:21,0:21:57.19:0,57,855	0/0:19,0:19:57.18:0,57,836	0/0:9,0:9:27.09:0,27,403	0/0:10,0:10:27.09:0,27,403	0/0:10,0:10:30.07:0,30,410	0/0:16,0:16:48.16:0,48,720	0/0:14,0:14:42.12:0,42,608	0/0:24,0:24:72.24:0,72,1079	0/0:24,0:24:72.22:0,72,1037	0/0:11,0:11:33.11:0,33,495
chr10	79447164	.	A	ATTTAT	798.17	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.856;DP=368;FS=4.537;HRun=0;HaplotypeScore=64.9258;InbreedingCoeff=0.6985;MQ=64.69;MQ0=0;MQRankSum=-5.803;QD=25.75;ReadPosRankSum=-0.428;VQSLOD=2.9803;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,6:8:12.04:342,12,0	0/0:6,0:6:12.04:0,12,225	0/0:12,0:6:5.65:0,6,32	0/0:14,0:5:3.01:0,3,36	0/0:25,0:25:42.12:0,42,703	0/0:14,0:15:39.12:0,39,659	0/0:10,0:10:9.03:0,9,155	0/0:35,0:35:42.13:0,42,697	1/1:1,1:2:3.01:86,3,0	0/0:14,0:14:30.10:0,30,541	0/0:14,0:14:33.10:0,33,567	1/1:2,2:5:6.02:171,6,0	1/1:5,4:10:9.03:257,9,0	1/1:4,1:6:3.01:85,3,0	0/0:4,0:4:9.03:0,9,168	0/0:10,0:10:15.05:0,15,275	0/0:21,0:21:36.12:0,36,653	0/0:9,0:9:15.05:0,15,280	0/0:19,0:19:36.11:0,36,598	0/0:11,0:11:18.06:0,18,330	0/0:6,0:6:6.02:0,6,112	0/0:3,0:3:6.02:0,6,71	0/0:5,0:5:12.04:0,12,219	0/0:4,0:4:12.04:0,12,225	0/0:24,0:24:54.17:0,54,926	0/0:29,0:29:48.14:0,48,789	0/0:39,0:39:80.41:0,80,1432	0/0:8,0:8:9.03:0,9,168
chr10	79447640	.	A	AT	204.71	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.110;DP=614;FS=1.162;HRun=9;HaplotypeScore=57.3798;InbreedingCoeff=0.9309;MQ=60.20;MQ0=2;MQRankSum=0.479;QD=12.04;ReadPosRankSum=-1.623;VQSLOD=2.6085;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:80.95:0,81,699	0/0:7,0:7:14.98:0,15,130	0/0:13,0:10:20.99:0,21,180	0/0:7,0:6:12:0,12,104	0/0:30,0:29:74.97:0,75,651	0/0:24,0:24:53.97:0,54,469	0/0:13,0:13:32.97:0,33,282	0/0:36,0:36:89.95:0,90,778	0/0:26,0:26:53.94:0,54,464	0/0:37,0:37:99:0,105,906	0/0:16,0:16:41.98:0,42,364	0/0:14,0:14:41.99:0,42,364	0/0:29,0:29:65.93:0,66,569	0/0:18,0:18:47.99:0,48,417	0/0:25,0:26:43.74:0,44,526	0/0:19,0:19:50.98:0,51,443	0/0:32,0:32:86.89:0,87,739	0/0:18,0:18:13.75:0,14,287	0/0:19,0:16:32.98:0,33,284	0/0:25,0:25:71.97:0,72,621	0/0:26,0:26:62.96:0,63,543	0/0:18,0:18:38.99:0,39,338	0/0:18,0:18:47.99:0,48,416	0/0:20,0:19:56.98:0,57,495	1/1:1,16:17:27.07:299,27,0	0/0:33,0:33:92.96:0,93,803	0/0:17,0:17:35.97:0,36,312	0/0:23,0:23:41.92:0,42,354
chr10	79449398	.	T	TACACACACACACACACAC	8014.76	PASS	AB=1.000;AC=33;AF=0.635;AN=52;BaseQRankSum=0.084;DP=510;FS=0.599;HRun=0;HaplotypeScore=176.9305;InbreedingCoeff=0.6754;MQ=56.66;MQ0=12;MQRankSum=-5.624;QD=26.45;ReadPosRankSum=-3.304;VQSLOD=3.2049;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:26:2.14:0,2,8	./.	0/1:25,0:17:3.93:4,0,158	0/0:28,0:17:11.94:0,12,485	./.	0/0:29,0:29:50.18:0,50,1688	0/0:15,0:16:8.14:0,8,889	1/1:28,0:26:29.67:838,30,0	0/0:5,0:15:2.39:0,2,13	1/1:6,0:20:20.94:768,21,0	1/1:9,10:31:3.01:253,3,0	1/1:2,0:18:6.02:269,6,0	1/1:1,0:13:3.01:156,3,0	1/1:1,0:15:3.01:155,3,0	1/1:4,10:25:5.93:270,6,0	1/1:17,0:17:15.05:409,15,0	0/0:24,0:24:26.13:0,26,1620	1/1:10,1:9:9.03:762,9,0	1/1:13,0:13:27.07:973,27,0	1/1:1,4:13:6.02:449,6,0	1/1:18,0:18:5.98:85,6,0	0/0:8,0:8:21.07:0,21,825	0/0:14,0:14:21.04:0,21,781	0/0:22,0:23:54.19:0,54,2179	1/1:15,0:15:12.02:584,12,0	1/1:18,0:18:40.95:1578,41,0	1/1:4,7:15:3.01:254,3,0	1/1:7,0:7:11.99:208,12,0
chr10	79449955	.	TG	T	1038.15	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.192;DP=682;FS=12.873;HRun=1;HaplotypeScore=64.2916;InbreedingCoeff=0.9967;MQ=75.64;MQ0=0;MQRankSum=-2.301;QD=35.80;ReadPosRankSum=-0.123;VQSLOD=2.3284;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.29:0,90,1415	0/0:9,0:9:27.09:0,27,432	0/0:11,0:11:26.85:0,27,348	0/0:14,0:14:30.01:0,30,488	0/0:35,0:35:99:0,105,1676	0/0:22,0:22:66.16:0,66,1017	0/0:18,0:18:54.18:0,54,858	0/0:23,0:23:69.17:0,69,1033	0/0:20,0:20:60.18:0,60,934	0/0:28,0:28:81.28:0,81,1296	0/0:37,0:37:99:0,108,1725	0/0:23,0:23:69.24:0,69,1101	0/0:28,0:28:84.29:0,84,1340	0/0:36,0:36:99:0,108,1722	0/0:27,0:27:81.28:0,81,1295	0/0:30,0:30:90.31:0,90,1439	0/0:17,0:17:51.17:0,51,815	0/0:12,0:12:36.12:0,36,574	0/0:23,0:23:69.21:0,69,1078	0/0:36,0:36:99:0,108,1698	0/0:14,0:14:42.14:0,42,669	0/0:36,0:36:99:0,108,1727	0/0:31,0:31:93.30:0,93,1464	0/0:20,0:20:60.20:0,60,959	1/1:0,29:29:81.27:1133,81,0	0/0:27,0:27:81.28:0,81,1295	0/0:35,0:34:99:0,105,1678	0/0:11,0:11:30.10:0,30,479
chr10	79450259	.	C	CA	11208.78	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-16.850;DP=751;FS=2.418;HRun=7;HaplotypeScore=69.9500;InbreedingCoeff=0.9984;MQ=81.85;MQ0=0;MQRankSum=-1.653;QD=29.27;ReadPosRankSum=1.614;VQSLOD=5.5371;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.06:0,81,762	1/1:4,6:10:18.06:217,18,0	0/0:33,0:33:56.61:0,57,567	0/0:29,0:29:62.44:0,62,548	1/1:4,29:33:87.14:995,87,0	0/0:23,0:23:63.10:0,63,608	0/0:22,0:22:60.05:0,60,566	1/1:7,30:37:90.28:1086,90,0	0/0:28,0:28:75.06:0,75,710	1/1:9,29:38:90.28:1084,90,0	1/1:6,20:26:66.18:779,66,0	0/0:17,0:17:48.08:0,48,464	0/0:23,0:23:60.09:0,60,579	0/0:20,0:20:48.07:0,48,464	1/1:2,33:35:96.29:1160,96,0	1/1:3,20:23:57.17:689,57,0	0/0:29,0:29:81.10:0,81,776	1/1:7,18:25:43.49:573,43,0	1/1:3,24:27:72.17:842,72,0	1/1:1,30:31:87.22:1034,87,0	1/1:5,18:23:22.18:551,22,0	0/0:29,0:29:81.10:0,81,773	0/0:24,0:24:66.08:0,66,626	0/0:29,0:29:81.11:0,81,776	0/0:33,0:33:93.14:0,93,898	1/1:6,30:36:90.26:1072,90,0	1/1:3,23:27:63.02:728,63,0	1/1:1,11:12:33.10:399,33,0
chr10	79450954	.	AC	A	11263.19	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=15.656;DP=580;FS=1.351;HRun=1;HaplotypeScore=58.3186;InbreedingCoeff=0.9934;MQ=73.99;MQ0=0;MQRankSum=0.239;QD=36.69;ReadPosRankSum=-1.326;VQSLOD=4.4801;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.20:0,60,856	1/1:1,10:11:26.98:331,27,0	0/0:9,0:9:19.64:0,20,238	0/0:13,0:13:11.04:0,11,188	1/1:1,24:25:75.11:976,75,0	0/0:29,0:29:87.23:0,87,1166	0/0:20,0:20:60.12:0,60,763	1/1:0,21:21:63.13:765,63,0	0/0:20,0:20:60.18:0,60,838	1/1:2,31:33:94.34:1286,94,0	1/1:0,23:23:69.23:963,69,0	0/0:19,0:19:54.17:0,54,754	0/0:17,0:17:51.16:0,51,710	0/0:21,0:21:60.16:0,60,818	1/1:1,16:17:42.03:561,42,0	1/1:0,24:24:51.17:713,51,0	0/0:29,0:29:87.27:0,87,1221	1/1:0,15:15:45.15:627,45,0	1/1:0,14:14:42.12:554,42,0	1/1:0,34:34:99:1253,99,0	1/1:0,15:15:30.10:419,30,0	0/0:19,0:19:57.17:0,57,795	0/0:13,0:13:39.13:0,39,556	0/0:10,0:10:30.08:0,30,407	0/0:34,0:34:99:0,102,1402	1/1:0,28:28:84.26:1141,84,0	1/1:0,37:37:96.29:1320,96,0	1/1:2,8:10:22.92:356,23,0
chr10	79453038	.	ATG	A	1855.45	PASS	AB=0.803;AC=41;AF=0.759;AN=54;BaseQRankSum=6.732;DP=589;FS=2.298;HRun=0;HaplotypeScore=88.8541;InbreedingCoeff=0.4197;MQ=61.61;MQ0=7;MQRankSum=-0.719;QD=4.01;ReadPosRankSum=0.775;VQSLOD=2.2389;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:32:8.52:42,9,0	1/1:4,2:6:3.01:33,3,0	./.	0/0:20,0:13:0:0,0,0	1/1:12,6:18:6.48:64,6,0	0/0:23,0:22:26.44:0,26,344	1/1:9,0:8:5.97:45,6,0	1/1:35,0:34:2.91:19,3,0	1/1:7,0:11:5.64:27,6,0	0/1:15,12:27:3.08:170,0,3	1/1:11,12:23:20.85:224,21,0	1/1:14,0:26:11.36:56,11,0	1/1:14,0:14:0.21:0,0,0	1/1:14,0:25:16.70:79,17,0	1/1:24,4:29:17.88:177,18,0	0/1:16,8:23:26.49:145,0,26	0/0:26,1:27:12.51:0,13,496	1/1:16,8:25:11.76:111,12,0	1/1:12,0:12:5.85:47,6,0	1/1:13,8:21:23.90:242,24,0	1/1:13,11:24:12.03:130,12,0	0/0:12,0:13:3.90:0,4,168	0/0:20,0:20:13.24:0,13,272	0/1:29,1:28:19.90:20,0,330	1/1:10,0:24:20.77:101,21,0	1/1:16,0:16:2.95:19,3,0	1/1:11,9:20:21.06:228,21,0	1/1:7,4:11:3.01:32,3,0
chr10	79454448	.	C	CAA	8547.13	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=8.542;DP=521;FS=3.261;HRun=11;HaplotypeScore=101.1203;InbreedingCoeff=0.9569;MQ=74.87;MQ0=1;MQRankSum=-3.069;QD=22.26;ReadPosRankSum=-2.035;VQSLOD=4.1347;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:26:36.12:521,36,0	1/1:3,8:12:23.57:312,24,0	0/0:13,0:15:11.39:0,11,92	0/0:12,0:12:9.97:0,10,91	1/1:6,16:22:45.06:599,45,0	0/0:24,0:24:19.57:0,20,538	0/0:16,0:17:41.74:0,42,384	1/1:9,13:24:53.66:709,54,0	1/1:11,14:24:26.57:329,27,0	1/1:5,12:18:39.10:523,39,0	1/1:8,22:32:33.52:757,34,0	1/1:3,1:15:12.03:122,12,0	1/1:11,0:19:24.01:228,24,0	1/1:10,1:19:28.27:273,28,0	1/1:6,5:12:19.32:207,19,0	1/1:4,15:21:38.10:495,38,0	0/0:23,0:23:53.94:0,54,508	1/1:5,13:18:27.05:365,27,0	1/1:6,10:19:39.04:489,39,0	1/1:2,17:21:56.97:662,57,0	1/1:2,8:12:26.02:297,26,0	0/0:11,0:12:14.94:0,15,195	0/0:9,0:9:24.01:0,24,227	0/0:25,0:25:66.02:0,66,640	1/1:2,10:14:32.50:380,33,0	1/1:7,14:26:55.40:664,55,0	1/1:7,19:27:38.62:526,39,0	1/1:0,2:2:6.02:87,6,0
chr10	79454956	.	GA	G	12015.81	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=11.187;DP=550;FS=6.708;HRun=4;HaplotypeScore=72.9291;InbreedingCoeff=0.9379;MQ=72.97;MQ0=0;MQRankSum=-3.596;QD=32.56;ReadPosRankSum=-0.194;VQSLOD=5.2003;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.20:0,60,840	1/1:0,2:2:6.02:72,6,0	0/0:11,0:11:10.48:0,10,330	0/0:13,0:12:0.37:0,0,250	1/1:3,27:30:78.24:933,78,0	0/0:27,0:27:78.26:0,78,1092	0/0:17,0:17:48.16:0,48,672	1/1:3,32:35:98.79:1160,99,0	0/0:15,0:15:42.13:0,42,573	1/1:2,15:17:45.14:539,45,0	1/1:4,15:18:48.13:563,48,0	1/1:1,16:17:51.14:599,51,0	1/1:3,17:20:57.13:666,57,0	1/1:4,18:22:60.15:689,60,0	1/1:0,18:18:54.17:647,54,0	1/1:6,15:21:51.12:586,51,0	0/0:28,0:28:81.26:0,81,1115	1/1:3,21:24:60.18:717,60,0	1/1:1,19:20:60.18:719,60,0	1/1:2,24:26:78.24:933,78,0	1/1:0,15:15:39.12:466,39,0	0/0:11,0:11:33.11:0,33,462	0/0:19,0:19:54.18:0,54,756	0/0:18,0:18:51.17:0,51,714	1/1:1,31:32:93.29:1113,93,0	1/1:2,22:24:63.19:750,63,0	1/1:6,16:21:60.14:684,60,0	1/1:0,5:5:15.05:180,15,0
chr10	79454994	.	CT	C	6459.27	PASS	AB=0.933;AC=35;AF=0.625;AN=56;BaseQRankSum=6.423;DP=518;FS=0.787;HRun=11;HaplotypeScore=84.4298;InbreedingCoeff=0.8691;MQ=68.68;MQ0=0;MQRankSum=-6.647;QD=18.30;ReadPosRankSum=-1.158;VQSLOD=5.1841;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:0,0:17:45.45:0,45,228	1/1:1,4:5:11.98:99,12,0	0/1:13,1:11:6.98:7,0,154	0/0:17,0:15:29.03:0,29,237	1/1:5,23:29:79.70:619,80,0	0/0:21,0:21:56.34:0,56,574	0/0:18,0:18:36.05:0,36,362	1/1:11,23:34:74.82:606,75,0	0/0:2,0:18:39.87:0,40,200	1/1:6,10:16:0.97:214,1,0	1/1:4,19:23:27.88:429,28,0	1/1:6,11:17:38.92:318,39,0	1/1:5,9:14:32.92:264,33,0	1/1:6,17:24:55.91:441,56,0	1/1:8,8:16:35.92:289,36,0	1/1:5,14:19:35.94:296,36,0	0/0:26,0:26:57.02:0,57,705	1/1:2,15:17:47.91:388,48,0	1/1:2,19:21:59.86:482,60,0	1/1:4,26:31:79.89:640,80,0	1/1:6,6:12:17.88:140,18,0	0/0:10,0:10:17.97:0,18,164	0/0:19,0:19:48.11:0,48,504	0/0:13,0:13:36.09:0,36,384	1/1:5,21:26:68.90:563,69,0	1/1:6,12:18:41.93:343,42,0	1/1:3,13:17:40.97:323,41,0	0/0:5,0:5:0:0,0,0
chr10	79455169	.	A	AT	11430.91	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=12.032;DP=476;FS=2.512;HRun=4;HaplotypeScore=149.9127;InbreedingCoeff=0.9615;MQ=67.35;MQ0=1;MQRankSum=-11.926;QD=33.13;ReadPosRankSum=2.104;VQSLOD=3.2246;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:39.13:525,39,0	1/1:1,10:11:33.11:441,33,0	0/0:21,0:14:31.22:0,31,323	0/0:17,0:13:13.93:0,14,116	1/1:9,22:31:69.18:902,69,0	0/0:17,0:17:48.13:0,48,541	0/0:7,0:7:21.06:0,21,238	1/1:11,18:29:72.20:948,72,0	1/1:0,8:8:21.07:287,21,0	1/1:3,10:13:36.12:480,36,0	1/1:1,16:16:42.14:570,42,0	1/1:2,17:19:57.19:768,57,0	1/1:2,15:17:51.12:656,51,0	1/1:5,11:16:41.91:503,42,0	1/1:4,12:16:45.15:597,45,0	1/1:12,13:25:57.12:730,57,0	0/0:29,0:29:58.27:0,58,819	1/1:5,12:17:33.11:440,33,0	1/1:7,5:12:21.07:285,21,0	1/1:7,24:31:81.21:1052,81,0	1/1:2,7:9:18.06:228,18,0	0/0:5,0:5:15.04:0,15,169	0/0:22,0:22:57.16:0,57,645	0/0:13,0:12:33.08:0,33,365	1/1:4,20:24:66.17:869,66,0	1/1:3,11:14:36.08:465,36,0	1/1:8,13:19:48.16:643,48,0	1/1:0,1:1:3.01:41,3,0
chr10	79455176	.	CAAAA	C	8968.03	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=13.043;DP=475;FS=0.000;HRun=14;HaplotypeScore=173.6788;InbreedingCoeff=0.9546;MQ=64.97;MQ0=1;MQRankSum=-12.335;QD=28.84;ReadPosRankSum=3.827;VQSLOD=2.0599;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:17:39.13:0,39,729	1/1:2,9:11:27.06:375,27,0	0/0:22,0:14:20.76:0,21,368	0/0:14,0:11:9.52:0,10,158	1/1:3,26:30:56.99:796,57,0	0/0:17,0:20:48.15:0,48,919	0/0:8,0:8:24.06:0,24,425	1/1:10,16:26:44.92:618,45,0	0/0:8,0:9:21.07:0,21,448	1/1:5,9:14:29.99:384,30,0	1/1:1,14:15:38.65:502,39,0	1/1:2,18:20:57.19:802,57,0	1/1:2,17:20:49.38:672,49,0	1/1:3,10:13:33.06:447,33,0	1/1:2,13:15:39.10:536,39,0	1/1:1,20:22:61.42:845,61,0	0/0:29,0:30:84.24:0,84,1781	1/1:6,11:17:23.83:339,24,0	1/1:3,6:9:14.94:196,15,0	1/1:4,25:29:69.06:936,69,0	1/1:4,5:9:11.99:153,12,0	0/0:5,0:6:15.05:0,15,271	0/0:22,0:23:57.18:0,57,1194	0/0:12,0:12:36.11:0,36,736	1/1:2,0:25:23.56:59,24,0	1/1:3,11:16:40.33:536,40,0	1/1:1,16:18:54.15:729,54,0	1/1:0,1:1:3.01:42,3,0
chr10	79456788	.	GGAAA	G	6143.12	PASS	AB=0.918;AC=28;AF=0.519;AN=54;BaseQRankSum=5.970;DP=621;FS=4.275;HRun=0;HaplotypeScore=156.1744;InbreedingCoeff=0.3173;MQ=53.59;MQ0=5;MQRankSum=-2.371;QD=15.17;ReadPosRankSum=4.395;VQSLOD=3.9893;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:7.31:0,7,57	1/1:10,4:14:0.67:274,1,0	0/0:29,0:12:3.01:0,3,39	./.	1/1:33,8:40:41.22:778,41,0	0/0:21,0:21:36.12:0,36,845	0/0:18,0:18:30.10:0,30,701	0/1:28,0:27:99:178,0,176	0/1:17,0:17:28.24:28,0,265	1/1:22,4:26:18.08:570,18,0	0/1:13,4:17:11.71:280,0,12	1/1:20,0:20:4.69:254,5,0	1/1:29,0:29:50.78:515,51,0	1/1:19,0:19:32.23:303,32,0	1/1:21,4:25:29.25:752,29,0	0/1:8,12:20:38.55:39,0,41	0/0:31,2:33:42.61:0,43,1349	0/1:26,0:26:88.13:146,0,88	0/1:16,0:16:39.28:41,0,39	1/1:15,7:22:21.05:421,21,0	0/1:4,0:4:2.88:36,0,3	0/0:21,0:21:45.15:0,45,1062	0/0:24,0:24:48.16:0,48,1148	0/0:26,0:26:54.16:0,54,1183	1/1:10,17:27:37.91:577,38,0	0/1:18,2:19:99:270,0,244	1/1:28,6:31:15:683,15,0	0/0:3,0:3:3.01:0,3,56
chr10	79456809	.	G	GGACA	168.97	PASS	AB=0.880;AC=2;AF=0.037;AN=54;BaseQRankSum=2.801;DP=654;FS=1.365;HRun=0;HaplotypeScore=220.8779;InbreedingCoeff=-0.0337;MQ=47.57;MQ0=14;MQRankSum=-3.672;QD=4.02;ReadPosRankSum=-1.806;VQSLOD=2.3492;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:2.57:3,0,527	0/0:13,0:13:36.09:0,36,526	0/0:28,0:7:15.93:0,16,251	./.	0/0:38,0:36:98.85:0,99,1325	0/0:26,0:26:78.18:0,78,1445	0/0:16,0:16:48.16:0,48,988	0/0:48,0:46:99:0,132,2405	0/1:13,6:19:99:243,0,534	0/0:29,0:28:76.49:0,76,1191	0/0:18,0:18:48.13:0,48,669	0/0:18,0:18:51.16:0,51,952	0/0:26,0:26:75.69:0,76,1311	0/0:19,0:19:54.19:0,54,1035	0/0:24,0:25:75.24:0,75,1165	0/0:22,0:22:30.57:0,31,489	0/0:35,0:35:99:0,102,1976	0/0:23,0:23:50.95:0,51,838	0/0:25,0:25:66.21:0,66,1125	0/0:20,0:20:54.04:0,54,722	0/0:6,0:6:15.05:0,15,256	0/0:17,0:17:51.09:0,51,1021	0/0:22,0:22:63.21:0,63,1277	0/0:28,0:28:75.26:0,75,1538	0/0:33,0:33:70.59:0,71,988	0/0:24,0:23:63.13:0,63,1047	0/0:34,0:31:93.13:0,93,1363	0/0:5,0:5:12.04:0,12,246
chr10	79456818	.	AAAGG	A	7556.79	PASS	AB=1.000;AC=34;AF=0.630;AN=54;BaseQRankSum=11.323;DP=657;FS=2.773;HRun=0;HaplotypeScore=200.3131;InbreedingCoeff=0.5206;MQ=47.14;MQ0=16;MQRankSum=-5.194;QD=15.91;ReadPosRankSum=-1.240;VQSLOD=4.6033;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:3.07:78,0,3	1/1:13,0:13:19.57:194,20,0	0/0:19,0:4:8.64:0,9,57	./.	1/1:39,0:37:58.23:575,58,0	0/0:26,0:26:78:0,78,1251	0/0:17,0:17:51.09:0,51,976	0/1:46,0:45:99:205,0,363	0/1:18,0:18:99:106,0,110	1/1:30,0:29:58.03:460,58,0	1/1:17,0:17:30.16:261,30,0	1/1:15,4:19:51.06:710,51,0	1/1:22,7:29:83.87:1218,84,0	1/1:16,2:18:54.03:771,54,0	1/1:26,0:26:58.50:518,59,0	1/1:21,0:21:13.01:184,13,0	0/0:35,0:35:55.05:0,55,1689	1/1:22,0:22:17.32:197,17,0	0/1:26,0:22:87.13:143,0,87	1/1:21,0:21:33.72:363,34,0	1/1:6,0:6:10.90:67,11,0	0/0:18,0:18:54.15:0,54,1213	0/0:27,0:27:78.13:0,78,1541	0/0:28,0:28:75.02:0,75,1419	1/1:39,0:39:94.28:731,94,0	0/1:24,0:23:99:196,0,122	1/1:34,0:31:11.13:545,11,0	0/1:4,0:4:21.66:34,0,22
chr10	79456822	.	GAAGAAAGA	G	408.96	PASS	AB=0.874;AC=3;AF=0.056;AN=54;BaseQRankSum=0.480;DP=667;FS=27.339;HRun=0;HaplotypeScore=282.4255;InbreedingCoeff=0.0295;MQ=47.12;MQ0=17;MQRankSum=1.564;QD=6.70;ReadPosRankSum=-4.549;VQSLOD=0.5112;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,14:23:56.51:230,0,57	0/0:14,0:14:30.28:0,30,263	0/0:21,0:4:8.49:0,8,66	./.	0/0:41,0:39:56.53:0,57,669	0/0:26,0:26:75.26:0,75,1981	0/0:20,0:20:60.21:0,60,1620	0/0:44,0:44:85.27:0,85,914	0/1:16,0:16:99:259,0,109	0/0:34,0:33:27.73:0,28,642	0/0:17,0:17:23.35:0,23,347	0/0:22,0:22:50.47:0,50,568	0/0:32,0:32:72.68:0,73,909	0/0:18,0:18:35.25:0,35,548	0/0:28,0:28:29.26:0,29,526	0/1:22,0:22:17.74:18,0,52	0/0:37,0:37:91.18:0,91,2750	0/0:19,0:19:16.80:0,17,335	0/0:23,0:18:26.51:0,27,367	0/0:21,0:21:40.46:0,40,421	0/0:5,0:5:1.25:0,1,3	0/0:19,0:19:57.18:0,57,1705	0/0:27,0:27:78.27:0,78,2402	0/0:26,0:26:75.26:0,75,2298	0/0:39,0:39:44.87:0,45,846	0/0:25,0:24:30.03:0,30,646	0/0:34,0:31:33.47:0,33,1035	0/0:4,0:4:5.52:0,6,85
chr10	79456829	.	GAACA	G	10098.26	PASS	AB=0.914;AC=37;AF=0.661;AN=56;BaseQRankSum=11.060;DP=663;FS=18.468;HRun=0;HaplotypeScore=191.2033;InbreedingCoeff=0.6645;MQ=47.32;MQ0=16;MQRankSum=-7.755;QD=21.17;ReadPosRankSum=-1.067;VQSLOD=3.2999;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:37.07:381,37,0	1/1:14,0:14:29.04:333,29,0	0/0:19,0:3:3.01:0,3,35	0/0:12,0:1:3.01:0,3,54	1/1:39,0:37:80:907,80,0	0/0:27,0:27:75.26:0,75,1871	0/0:21,0:21:60.21:0,60,1407	1/1:44,0:44:37.78:1006,38,0	1/1:14,0:14:31.60:288,32,0	1/1:34,0:33:78.82:835,79,0	1/1:21,0:21:39.07:520,39,0	0/1:17,2:19:99:145,0,106	0/1:28,4:32:99:309,0,110	0/1:17,1:18:39.91:170,0,40	1/1:28,0:28:66.61:775,67,0	1/1:22,0:22:40.78:485,41,0	0/0:36,1:37:15.89:0,16,2194	1/1:19,1:20:46.09:584,46,0	1/1:17,2:14:16.23:353,16,0	1/1:21,2:23:44.74:581,45,0	1/1:6,0:6:15.02:178,15,0	0/0:17,0:17:51.17:0,51,1103	0/0:29,0:29:84.27:0,84,1902	0/0:24,0:24:72.25:0,72,1692	1/1:31,7:38:35.08:902,35,0	1/1:26,0:25:7.43:493,7,0	1/1:26,4:27:47.28:769,47,0	1/1:4,0:4:3.89:85,4,0
chr10	79456833	.	A	AAAAG	5966.41	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=9.340;DP=661;FS=5.677;HRun=0;HaplotypeScore=211.6442;InbreedingCoeff=0.7267;MQ=47.75;MQ0=16;MQRankSum=-6.232;QD=12.72;ReadPosRankSum=-1.666;VQSLOD=4.0041;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:12.94:139,13,0	1/1:13,0:13:3.93:96,4,0	0/0:20,0:4:2.71:0,3,39	0/0:16,0:5:0.04:0,0,109	1/1:39,0:37:31.96:179,32,0	0/0:27,0:28:66.14:0,66,1014	0/0:19,0:19:39.12:0,39,609	1/1:39,0:39:26.78:273,27,0	1/1:16,0:16:18.43:173,18,0	1/1:34,0:33:4.31:157,4,0	1/1:21,0:21:21.34:147,21,0	1/1:17,3:20:39.11:838,39,0	1/1:31,2:33:66.23:1535,66,0	1/1:17,1:18:45.05:972,45,0	1/1:28,0:28:22.42:197,22,0	1/1:23,0:23:5.38:34,5,0	0/0:37,0:37:71.70:0,72,1167	1/1:22,0:22:19.23:223,19,0	1/1:17,0:12:8.85:76,9,0	1/1:25,0:25:26.42:231,26,0	1/1:6,0:6:3.90:41,4,0	0/0:17,0:17:30.09:0,30,461	0/0:28,0:28:54.18:0,54,878	0/0:23,0:23:42.14:0,42,679	1/1:37,0:37:26.67:296,27,0	0/1:24,0:23:9.90:143,0,10	1/1:28,0:25:31.04:216,31,0	0/0:4,0:4:0.70:0,1,2
chr10	79457349	.	C	CA	1162.99	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.441;DP=917;FS=0.701;HRun=1;HaplotypeScore=128.4553;InbreedingCoeff=0.9703;MQ=65.40;MQ0=3;MQRankSum=0.003;QD=40.10;ReadPosRankSum=0.231;VQSLOD=3.2073;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,175,2257	0/0:20,0:20:60.17:0,60,761	0/0:44,0:38:99:0,106,1350	0/0:39,0:29:75.55:0,76,924	0/0:34,0:34:96.31:0,96,1247	0/0:28,0:28:84.24:0,84,1058	0/0:23,0:23:63.19:0,63,804	0/0:36,0:36:93.27:0,93,1168	0/0:34,0:34:99:0,99,1270	0/0:37,0:37:99:0,108,1377	0/0:21,0:21:57.19:0,57,739	0/0:37,0:37:99:0,102,1309	0/0:39,0:39:99:0,114,1460	0/0:41,0:41:99:0,114,1465	0/0:42,0:42:99:0,120,1528	0/0:35,0:35:99:0,105,1363	0/0:30,0:30:86.96:0,87,1129	0/0:15,0:15:45.15:0,45,582	0/0:24,0:24:63.20:0,63,814	0/0:28,0:28:84.27:0,84,1090	0/0:61,0:61:99:0,184,2376	0/0:29,0:29:87.26:0,87,1113	0/0:22,0:22:63.20:0,63,818	0/0:36,0:36:99:0,108,1357	1/1:0,29:29:84.28:1258,84,0	0/0:36,0:36:99:0,102,1323	0/0:30,0:30:90.29:0,90,1166	0/0:4,0:4:12.04:0,12,156
chr10	79459735	.	CA	C	4068.37	PASS	AB=0.942;AC=40;AF=0.714;AN=56;BaseQRankSum=2.697;DP=538;FS=11.424;HRun=15;HaplotypeScore=87.9873;InbreedingCoeff=0.6677;MQ=59.56;MQ0=15;MQRankSum=3.513;QD=10.00;ReadPosRankSum=3.027;VQSLOD=2.1254;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:62.30:0,62,255	1/1:1,2:3:5.89:38,6,0	0/1:17,0:10:9.25:9,0,61	0/1:10,0:5:7.64:8,0,40	1/1:8,21:29:53.04:345,53,0	0/0:24,1:27:15.10:0,15,353	0/1:16,3:19:15.71:16,0,217	1/1:16,17:33:50:324,50,0	0/0:9,0:8:21.43:0,21,93	1/1:5,15:20:44.26:287,44,0	1/1:1,8:10:25.66:159,26,0	1/1:12,9:20:23.49:154,23,0	1/1:6,7:13:18.55:107,19,0	1/1:7,7:15:21.70:127,22,0	1/1:4,17:21:38.39:249,38,0	1/1:5,14:19:38.34:249,38,0	0/0:21,4:26:18.64:0,19,377	1/1:10,9:18:9.90:151,10,0	1/1:5,18:23:52.68:340,53,0	1/1:2,17:20:52.28:332,52,0	1/1:5,12:15:32.48:211,32,0	0/1:16,2:18:5.58:6,0,203	0/0:16,1:18:21.52:0,22,275	0/0:18,0:19:29.79:0,30,242	1/1:2,0:15:19.22:55,19,0	1/1:3,20:20:56.09:364,56,0	1/1:4,20:24:59.95:385,60,0	1/1:4,8:9:23.40:153,23,0
chr10	79461021	.	CT	C	13605.59	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=5.354;DP=764;FS=0.552;HRun=2;HaplotypeScore=91.0838;InbreedingCoeff=0.9998;MQ=88.04;MQ0=0;MQRankSum=-2.830;QD=35.90;ReadPosRankSum=2.891;VQSLOD=5.2796;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.21:0,66,968	1/1:0,10:10:27.09:350,27,0	0/0:37,0:37:99:0,108,1495	0/0:18,0:18:51.17:0,51,745	1/1:0,34:34:99:1264,99,0	0/0:38,0:38:99:0,111,1615	0/0:28,0:28:81.24:0,81,1170	1/1:0,26:26:78.23:984,78,0	0/0:24,0:24:72.24:0,72,1061	1/1:1,29:30:87.25:1096,87,0	1/1:1,25:26:66.21:853,66,0	0/0:23,0:23:69.22:0,69,1015	0/0:35,0:35:99:0,105,1550	0/0:32,0:32:96.31:0,96,1417	1/1:1,34:35:93.30:1207,93,0	1/1:0,35:35:96.18:1246,96,0	0/0:29,0:29:84.24:0,84,1231	1/1:0,19:19:51.13:643,51,0	1/1:1,21:22:63.19:802,63,0	1/1:0,44:44:99:1671,129,0	1/1:1,31:32:84.27:1090,84,0	0/0:26,0:26:78.26:0,78,1151	0/0:24,0:24:72.23:0,72,1058	0/0:25,0:25:75.25:0,75,1123	0/0:23,0:23:66.22:0,66,989	1/1:0,28:28:84.26:1075,84,0	1/1:0,27:27:72.23:934,72,0	1/1:0,11:11:30.10:389,30,0
chr10	79461345	.	AT	A	6182.25	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=10.408;DP=639;FS=0.000;HRun=10;HaplotypeScore=80.2469;InbreedingCoeff=0.9689;MQ=70.46;MQ0=0;MQRankSum=-0.452;QD=19.44;ReadPosRankSum=-0.659;VQSLOD=5.1220;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:25:66.01:0,66,711	1/1:1,9:10:23.86:208,24,0	0/0:16,0:16:2.04:0,2,209	0/0:12,0:12:17.93:0,18,192	1/1:2,22:24:59.96:521,60,0	0/0:27,0:27:77.41:0,77,830	0/0:20,0:20:51.14:0,51,564	1/1:9,22:31:62.95:542,63,0	0/0:30,2:32:26.09:0,26,738	1/1:2,14:16:38.98:339,39,0	1/1:3,18:21:20.80:409,21,0	0/0:16,0:17:48.05:0,48,515	0/0:26,0:26:40.31:0,40,654	0/0:23,0:25:66:0,66,702	1/1:3,19:22:47.99:417,48,0	1/1:3,21:24:20.80:410,21,0	0/0:32,0:32:87.24:0,87,962	1/1:2,12:14:32.99:286,33,0	1/1:3,17:20:50.98:443,51,0	1/1:4,27:31:77.93:677,78,0	1/1:8,20:28:19.35:374,19,0	0/0:21,0:22:53.96:0,54,568	0/0:19,0:21:45.81:0,46,468	0/0:21,0:21:54.15:0,54,597	0/0:24,0:24:57.15:0,57,630	1/1:5,23:28:65.94:567,66,0	1/1:2,29:31:77.96:677,78,0	1/1:5,13:18:35.99:313,36,0
chr10	79464474	.	AT	A	15909.14	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=12.765;DP=734;FS=25.146;HRun=6;HaplotypeScore=71.6887;InbreedingCoeff=0.9996;MQ=79.03;MQ0=0;MQRankSum=-4.433;QD=28.51;ReadPosRankSum=2.252;VQSLOD=3.1520;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,55:56:99:1612,150,0	1/1:1,15:16:45.11:484,45,0	0/0:20,0:20:34.91:0,35,625	0/0:13,0:13:36.12:0,36,471	1/1:1,35:36:96.24:1031,96,0	0/0:31,0:31:90.28:0,90,1170	0/0:22,0:22:54.18:0,54,711	1/1:3,28:31:81.20:870,81,0	1/1:1,15:16:45.11:483,45,0	1/1:0,41:41:99:1314,123,0	1/1:1,24:25:69.17:742,69,0	1/1:0,31:31:90.23:967,90,0	1/1:1,25:26:72.18:774,72,0	1/1:1,34:35:96.24:1032,96,0	1/1:2,19:21:51.13:548,51,0	1/1:1,19:20:48.12:516,48,0	0/0:31,0:31:90.29:0,90,1183	1/1:1,11:12:33.08:355,33,0	1/1:7,21:28:63.11:667,63,0	1/1:2,33:35:90.22:967,90,0	1/1:3,32:35:84.21:903,84,0	0/0:20,0:20:60.20:0,60,789	0/0:20,0:20:60.19:0,60,785	0/0:19,0:19:51.17:0,51,671	1/1:1,25:26:72.18:774,72,0	1/1:3,34:37:99:1064,99,0	1/1:3,19:22:51.12:548,51,0	1/1:0,9:9:24.06:258,24,0
chr10	79466340	.	G	GA	725.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.981;DP=703;FS=0.849;HRun=2;HaplotypeScore=64.5790;InbreedingCoeff=0.9985;MQ=71.25;MQ0=1;MQRankSum=-1.198;QD=32.98;ReadPosRankSum=0.569;VQSLOD=3.5123;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1300	0/0:14,0:14:39.12:0,39,483	0/0:16,0:16:45.11:0,45,515	0/0:22,0:21:54.13:0,54,624	0/0:40,0:40:99:0,108,1324	0/0:30,0:30:81.24:0,81,991	0/0:26,0:26:75.23:0,75,918	0/0:35,0:35:93.25:0,93,1103	0/0:22,0:22:66.18:0,66,793	0/0:34,0:34:96.29:0,96,1179	0/0:23,0:23:66.21:0,66,816	0/0:19,1:20:37.19:0,37,649	0/0:28,0:28:84.25:0,84,1029	0/0:16,0:16:48.13:0,48,581	0/0:34,0:34:99:0,102,1239	0/0:29,0:29:84.26:0,84,1041	0/0:24,0:24:69.22:0,69,855	0/0:14,0:14:39.05:0,39,449	0/0:31,0:30:90.28:0,90,1104	0/0:31,0:31:93.29:0,93,1152	0/0:21,0:21:60.13:0,60,713	0/0:24,0:24:69.20:0,69,842	0/0:31,0:31:90.27:0,90,1101	0/0:13,0:13:33.10:0,33,409	1/1:0,22:22:57.19:821,57,0	0/0:30,0:30:87.26:0,87,1055	0/0:27,0:27:81.23:0,81,977	0/0:10,0:10:27.08:0,27,335
chr10	79466448	.	CA	C	6559.15	PASS	AB=0.930;AC=53;AF=0.946;AN=56;BaseQRankSum=6.541;DP=705;FS=2.380;HRun=1;HaplotypeScore=136.1182;InbreedingCoeff=-0.0552;MQ=72.20;MQ0=0;MQRankSum=-1.177;QD=9.30;ReadPosRankSum=8.498;VQSLOD=2.1411;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:46,0:46:79.69:442,80,0	1/1:11,0:11:29.74:126,30,0	0/1:11,4:15:19.04:150,0,19	0/1:10,0:9:50.94:77,0,51	1/1:34,0:34:25:283,25,0	1/1:36,0:36:20.83:279,21,0	1/1:23,0:23:26.30:176,26,0	1/1:23,0:23:55.27:216,55,0	1/1:20,0:20:51.15:213,51,0	1/1:21,0:21:50.44:182,50,0	1/1:20,0:20:23.15:174,23,0	1/1:32,0:32:52.15:294,52,0	1/1:21,0:21:29.21:189,29,0	1/1:21,0:21:32.59:217,33,0	1/1:32,0:32:83.50:354,84,0	1/1:27,0:27:62.15:273,62,0	1/1:13,0:13:9.28:112,9,0	1/1:12,0:12:30.01:137,30,0	0/1:21,0:21:3.59:100,0,4	1/1:30,0:30:10.04:224,10,0	1/1:35,0:35:15.58:275,16,0	1/1:31,0:31:81.18:362,81,0	1/1:31,0:31:47.24:275,47,0	1/1:25,0:25:42.71:236,43,0	1/1:37,0:37:96.43:401,96,0	1/1:37,0:37:45.30:308,45,0	1/1:21,1:22:35.04:240,35,0	1/1:18,1:19:52.04:242,52,0
chr10	79466826	.	C	CA	3773.29	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.781;DP=876;FS=12.124;HRun=4;HaplotypeScore=90.3497;InbreedingCoeff=0.9530;MQ=78.34;MQ0=0;MQRankSum=-2.252;QD=36.28;ReadPosRankSum=1.661;VQSLOD=2.8288;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,141,1599	0/0:17,0:17:51.15:0,51,579	0/0:21,0:21:28.42:0,28,351	0/0:20,0:20:34.52:0,35,386	0/0:50,0:50:99:0,135,1516	0/0:34,0:34:99:0,99,1123	0/0:26,0:26:60.14:0,60,669	0/0:37,0:37:99:0,99,1114	0/0:28,0:28:75.21:0,75,850	0/0:42,0:42:99:0,117,1320	0/0:26,0:26:78.22:0,78,884	1/1:4,42:46:99:1559,114,0	1/1:0,33:33:93.29:1271,93,0	1/1:1,24:25:69.23:943,69,0	0/0:37,0:37:99:0,108,1216	0/0:43,0:43:99:0,123,1385	0/0:25,0:25:69.20:0,69,783	0/0:4,0:4:12.03:0,12,135	0/0:31,0:31:84.21:0,84,934	0/0:41,0:41:99:0,111,1248	0/0:33,0:33:96.27:0,96,1089	0/0:41,0:41:99:0,123,1365	0/0:33,0:32:90.22:0,90,999	0/0:25,0:25:69.19:0,69,783	0/0:33,0:33:96.27:0,96,1089	0/0:42,0:42:99:0,120,1361	0/0:31,0:31:84.19:0,84,921	0/0:2,0:2:6:0,6,57
chr10	79467041	.	C	CTT	3617.16	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=16.160;DP=736;FS=30.196;HRun=1;HaplotypeScore=125.1251;InbreedingCoeff=0.9994;MQ=86.05;MQ0=0;MQRankSum=-15.580;QD=30.92;ReadPosRankSum=0.829;VQSLOD=2.0708;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,14:20:59.93:639,60,0	0/0:16,0:16:45.15:0,45,688	0/0:30,0:30:84.28:0,84,1241	0/0:28,0:28:75.21:0,75,1074	0/0:33,0:33:90.29:0,90,1347	0/0:35,0:35:99:0,102,1531	0/0:14,0:14:42.14:0,42,642	0/0:38,0:38:99:0,105,1549	1/1:5,23:28:84.17:907,84,0	0/0:35,0:35:99:0,102,1543	0/0:27,0:27:75.25:0,75,1139	1/1:3,22:25:72.16:765,72,0	1/1:2,16:18:50.34:501,50,0	1/1:5,21:26:78.13:805,78,0	0/0:30,0:30:84.27:0,84,1264	0/0:37,0:37:99:0,105,1606	0/0:25,0:25:75.25:0,75,1148	0/0:12,0:12:30.10:0,30,459	0/0:16,0:16:45.11:0,45,643	0/0:32,0:32:90.29:0,90,1356	0/0:23,0:23:66.19:0,66,966	0/0:30,0:30:90.29:0,90,1356	0/0:24,0:24:69.22:0,69,1031	0/0:29,0:29:84.29:0,84,1286	0/0:32,0:32:96.32:0,96,1447	0/0:33,0:33:90.30:0,90,1354	0/0:32,0:32:93.32:0,93,1413	0/0:8,0:8:24.08:0,24,367
chr10	79467836	.	GAGTGTGACT	G	9025.10	PASS	AB=0.542;AC=25;AF=0.463;AN=54;BaseQRankSum=9.352;DP=618;FS=155.567;HRun=0;HaplotypeScore=210.0744;InbreedingCoeff=0.9068;MQ=84.10;MQ0=1;MQRankSum=-12.766;QD=58.23;ReadPosRankSum=0.239;VQSLOD=1.6522;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:58:99:0,151,7009	1/1:2,5:7:9.03:252,9,0	0/0:44,0:44:65.55:0,66,3245	0/0:54,0:46:80.77:0,81,3031	1/1:2,14:17:18.06:527,18,0	0/0:18,0:18:33.11:0,33,1604	0/0:25,0:25:72.25:0,72,3374	1/1:4,7:11:21.06:578,21,0	0/0:25,0:25:69.24:0,69,3322	1/1:1,7:8:24.08:735,24,0	1/1:1,10:11:27.05:730,27,0	0/0:33,0:33:78.27:0,78,3495	0/0:30,0:30:81.28:0,81,3868	0/0:29,0:29:78.27:0,78,3689	1/1:0,18:18:42.14:1239,42,0	0/1:4,22:26:91.32:1460,0,91	0/0:25,0:25:72.25:0,72,3357	1/1:2,4:5:15.05:405,15,0	1/1:3,4:7:18.05:462,18,0	1/1:0,11:11:27.09:803,27,0	1/1:4,6:10:12.04:278,12,0	0/0:31,0:31:78.27:0,78,3713	0/0:30,0:30:84.29:0,84,3895	0/0:33,0:33:87.30:0,87,3921	0/0:25,0:25:72.25:0,72,2751	1/1:0,11:11:30.10:782,30,0	1/1:2,10:12:27.09:774,27,0	./.
chr10	79469466	.	ATG	A	3196.53	PASS	AB=0.938;AC=35;AF=0.625;AN=56;BaseQRankSum=8.770;DP=716;FS=8.612;HRun=0;HaplotypeScore=142.2786;InbreedingCoeff=0.3937;MQ=59.44;MQ0=8;MQRankSum=-0.624;QD=6.10;ReadPosRankSum=3.154;VQSLOD=2.4853;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:24:35.98:0,36,305	0/1:11,0:11:11.61:14,0,12	0/0:28,0:15:6.02:0,6,93	0/0:44,0:29:15.03:0,15,292	1/1:29,0:29:32.21:137,32,0	0/1:18,3:22:43.79:44,0,639	0/1:14,2:17:30.22:30,0,451	1/1:32,0:28:7.83:32,8,0	0/0:13,0:21:21:0,21,182	1/1:32,0:28:11.83:117,12,0	0/1:27,0:27:0.71:65,0,1	1/1:10,14:25:4.24:466,4,0	1/1:10,17:27:48.14:554,48,0	1/1:7,26:33:28.55:764,29,0	1/1:30,0:28:50.13:209,50,0	1/1:29,0:26:40.17:168,40,0	0/1:11,1:13:33.77:34,0,123	0/1:18,0:18:25.74:26,0,54	1/1:20,0:19:18.88:80,19,0	1/1:36,0:36:48.66:218,49,0	1/1:31,0:28:2.14:74,2,0	0/0:16,0:16:7.81:0,8,393	0/1:29,2:32:23.14:23,0,702	0/0:32,2:34:34.17:0,34,937	0/0:9,0:20:6:0,6,52	1/1:24,0:24:14.86:105,15,0	1/1:23,0:21:19.60:137,20,0	1/1:9,0:9:21.43:89,21,0
chr10	79469489	.	TGTGTGC	T	3633.96	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=2.504;DP=772;FS=1.056;HRun=0;HaplotypeScore=226.4126;InbreedingCoeff=0.9039;MQ=50.90;MQ0=11;MQRankSum=0.110;QD=10.01;ReadPosRankSum=-0.395;VQSLOD=2.6146;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:39.59:0,40,813	1/1:6,0:6:5:21,5,0	0/0:32,0:17:41.77:0,42,497	0/0:40,0:20:23.21:0,23,724	1/1:28,1:27:40.98:264,41,0	0/0:27,0:26:72.15:0,72,1846	0/0:22,0:22:57.03:0,57,1412	1/1:38,0:36:57.63:652,58,0	0/0:21,0:20:29.90:0,30,521	1/1:38,0:31:67.59:412,68,0	1/1:24,0:23:20.77:83,21,0	0/0:35,0:35:54.51:0,55,649	0/0:30,0:30:53.81:0,54,605	0/0:35,0:34:73.81:0,74,816	1/1:30,1:29:68.23:458,68,0	1/1:31,0:27:56.95:296,57,0	0/0:19,0:19:35.22:0,35,473	0/1:17,0:17:60.90:61,0,67	1/1:16,1:14:34.31:315,34,0	1/1:36,1:35:21.77:210,22,0	1/1:37,0:34:15.83:280,16,0	0/0:28,0:26:48.65:0,49,1071	0/0:30,0:29:65.34:0,65,1848	0/0:41,0:41:81.15:0,81,2272	0/0:24,0:21:15.01:0,15,209	1/1:22,0:20:31.31:221,31,0	1/1:22,0:20:48.50:244,48,0	1/1:14,0:13:15.89:117,16,0
chr10	79469491	.	TGTGC	T	10400.82	PASS	AB=0.921;AC=29;AF=0.518;AN=56;BaseQRankSum=-3.169;DP=772;FS=1.873;HRun=0;HaplotypeScore=184.2655;InbreedingCoeff=0.7838;MQ=51.08;MQ0=11;MQRankSum=1.946;QD=24.76;ReadPosRankSum=-0.426;VQSLOD=4.7750;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:38.74:0,39,505	1/1:1,5:6:5.82:113,6,0	0/0:30,0:16:44.70:0,45,465	0/0:39,0:19:27.73:0,28,558	1/1:18,11:27:45.11:729,45,0	0/0:27,0:26:72.01:0,72,1390	0/0:26,0:26:65.86:0,66,1095	1/1:2,33:33:92.90:871,93,0	0/0:21,0:20:32.89:0,33,360	1/1:23,13:30:81.12:1136,81,0	1/1:5,18:22:24.08:452,24,0	0/1:33,0:33:12.02:12,0,269	0/0:30,0:30:37.54:0,38,262	0/0:36,0:35:36.49:0,36,313	1/1:16,16:30:78.59:1168,79,0	1/1:14,16:26:66.08:1013,66,0	0/0:18,0:18:11.69:0,12,350	0/1:11,5:16:27.93:343,0,28	1/1:6,12:15:42.06:540,42,0	1/1:9,27:34:50.95:940,51,0	1/1:28,10:35:63.02:803,63,0	0/1:29,0:27:6.01:6,0,783	0/0:31,0:30:39.88:0,40,1384	0/0:44,0:44:79.91:0,80,1729	0/0:25,0:22:21:0,21,206	1/1:4,18:20:54.08:817,54,0	1/1:9,14:21:57.12:913,57,0	1/1:6,8:13:36.04:546,36,0
chr10	79469577	.	TGC	T	6949.42	PASS	AB=0.805;AC=27;AF=0.482;AN=56;BaseQRankSum=4.791;DP=739;FS=27.282;HRun=0;HaplotypeScore=175.1525;InbreedingCoeff=-0.6613;MQ=46.26;MQ0=15;MQRankSum=-2.966;QD=10.84;ReadPosRankSum=-3.162;VQSLOD=2.6450;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:1.54:2,0,265	0/1:3,1:4:24.90:40,0,25	0/0:37,0:17:24.23:0,24,485	0/0:30,0:14:29.76:0,30,609	0/1:14,6:17:99:211,0,104	0/1:18,2:20:65.05:65,0,725	0/1:19,2:21:46.78:47,0,488	0/1:28,5:21:71.46:327,0,71	0/1:24,1:24:1.72:2,0,506	0/1:21,5:21:99:257,0,201	0/1:7,8:13:54.70:203,0,55	0/1:8,25:32:30.20:835,0,30	1/1:7,28:34:40.71:1229,41,0	1/1:6,20:25:0.35:843,0,0	0/1:30,7:36:99:188,0,538	0/1:22,11:32:99:397,0,357	0/1:15,5:20:49.60:50,0,596	0/1:19,6:25:99:244,0,314	0/1:7,4:8:84.91:136,0,85	0/1:15,10:22:99:263,0,255	0/1:34,4:36:99:106,0,487	0/1:27,13:35:99:416,0,939	0/1:18,12:26:99:271,0,735	0/1:29,11:40:99:311,0,1098	0/0:29,0:18:0.06:0,0,337	0/1:23,10:31:99:343,0,350	0/1:22,3:23:69:69,0,417	0/1:7,3:9:89.66:94,0,90
chr10	79479732	.	T	TGC	160.17	PASS	AB=0.889;AC=8;AF=0.143;AN=56;BaseQRankSum=4.165;DP=270;FS=8.994;HRun=0;HaplotypeScore=57.5837;InbreedingCoeff=-0.0325;MQ=37.48;MQ0=26;MQRankSum=-2.333;QD=2.08;ReadPosRankSum=2.030;VQSLOD=0.2784;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:3:4.19:0,4,21	0/0:3,0:3:9.03:0,9,131	0/0:22,0:2:3.01:0,3,46	0/0:11,0:4:4.41:0,4,101	0/0:8,0:7:12.04:0,12,167	0/1:8,3:10:83.50:84,0,196	0/0:10,0:7:15.46:0,15,224	0/0:15,0:9:26.95:0,27,311	1/1:3,0:3:4.97:18,5,0	0/0:9,0:4:11.97:0,12,124	0/0:10,0:7:12.03:0,12,161	0/0:6,0:6:15.05:0,15,186	0/0:11,0:10:25.53:0,26,239	0/0:13,0:11:24.01:0,24,257	0/1:8,0:7:10.55:11,0,31	0/0:8,0:8:2.79:0,3,116	0/1:12,1:12:29.14:29,0,249	0/0:2,0:1:2.98:0,3,21	0/0:6,0:4:11.92:0,12,107	0/0:9,0:8:12.01:0,12,141	0/0:10,0:8:14.99:0,15,183	0/1:10,2:10:44.36:44,0,52	0/1:11,5:11:90.10:90,0,94	0/0:17,2:19:12.89:0,13,200	0/1:14,0:12:13.01:13,0,20	0/0:7,0:6:12:0,12,157	0/0:8,0:7:11.94:0,12,110	0/0:2,0:2:5.98:0,6,58
chr10	79479733	.	G	GCA	67.78	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=4.320;DP=284;FS=4.485;HRun=0;HaplotypeScore=60.0509;InbreedingCoeff=0.0130;MQ=37.07;MQ0=30;MQRankSum=-2.236;QD=1.21;ReadPosRankSum=2.350;VQSLOD=1.2080;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:3:7.20:0,7,57	0/0:3,0:3:9.03:0,9,146	0/0:23,0:2:5.98:0,6,69	0/0:12,0:4:4.45:0,4,132	0/0:8,0:7:12.04:0,12,194	0/1:11,0:10:55.84:56,0,263	0/0:11,0:7:20.65:0,21,269	0/0:17,0:10:27.09:0,27,409	1/1:3,1:4:3.68:15,4,0	0/0:10,0:4:12.04:0,12,180	0/0:10,0:7:12.04:0,12,193	0/0:8,0:7:15.05:0,15,240	0/0:10,1:10:25.64:0,26,366	0/0:14,1:13:24.08:0,24,375	0/0:8,0:7:3.90:0,4,50	0/0:8,0:8:2.85:0,3,169	0/1:13,0:12:16.34:16,0,312	0/0:2,0:1:3.01:0,3,33	0/0:6,0:4:12.04:0,12,169	0/0:10,0:8:12.04:0,12,190	0/0:10,0:8:15.03:0,15,212	0/1:12,0:10:30.52:31,0,85	0/1:16,0:11:65.59:66,0,124	0/0:19,0:19:12.89:0,13,239	0/0:10,4:12:2.13:0,2,45	0/0:7,0:6:12.04:0,12,186	0/0:9,0:8:12.04:0,12,170	0/0:2,0:2:6.02:0,6,87
chr10	79479767	.	G	GTGTT	8714.79	PASS	AB=0.867;AC=28;AF=0.538;AN=52;BaseQRankSum=5.532;DP=702;FS=34.176;HRun=0;HaplotypeScore=121.7818;InbreedingCoeff=-0.5889;MQ=34.42;MQ0=104;MQRankSum=-6.606;QD=15.34;ReadPosRankSum=0.570;VQSLOD=2.8701;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:22:50.70:0,51,736	0/1:6,1:4:65.63:66,0,150	./.	./.	0/1:18,3:13:99:181,0,245	0/1:22,0:20:99:108,0,659	0/1:25,0:18:99:153,0,527	0/1:16,6:10:33.14:85,0,33	0/1:15,0:15:49.88:50,0,500	0/1:18,10:10:99:323,0,135	0/1:16,7:8:99:342,0,138	1/1:24,1:22:66.07:1121,66,0	1/1:27,3:24:15.27:1112,15,0	1/1:26,3:22:9.19:984,9,0	0/1:12,9:14:27.93:520,0,28	0/1:13,11:19:34.19:863,0,34	0/1:22,0:21:26.86:27,0,725	0/1:4,1:3:28.24:113,0,28	1/1:9,4:7:12.04:291,12,0	0/1:17,10:16:76.30:568,0,76	0/1:14,4:12:99:124,0,141	0/1:35,0:27:99:351,0,580	0/1:41,0:31:99:291,0,1047	0/1:42,0:42:22.40:22,0,1367	0/1:29,0:21:99:177,0,507	0/1:15,9:15:99:478,0,180	0/1:15,4:10:32.23:363,0,32	0/0:1,0:1:3.01:0,3,54
chr10	79479771	.	T	TTGTG	9210.37	PASS	AB=0.951;AC=27;AF=0.519;AN=52;BaseQRankSum=-0.260;DP=764;FS=31.152;HRun=0;HaplotypeScore=135.4649;InbreedingCoeff=-0.6493;MQ=35.24;MQ0=105;MQRankSum=-6.218;QD=14.78;ReadPosRankSum=5.525;VQSLOD=2.6191;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:24:56.78:0,57,840	0/1:9,0:6:39.70:40,0,188	./.	./.	0/1:21,0:13:99:109,0,275	0/1:18,4:20:99:159,0,727	0/1:27,5:25:99:207,0,618	0/1:23,0:7:36.65:37,0,85	0/1:19,0:19:27.92:28,0,544	0/1:30,0:13:99:223,0,195	0/1:25,0:10:99:233,0,160	1/1:7,21:25:72.22:1613,72,0	1/1:12,22:28:19.27:1588,19,0	1/1:9,20:23:10.24:1390,10,0	0/1:26,0:18:99:380,0,137	0/1:29,0:23:99:533,0,147	0/1:22,2:23:56.87:57,0,744	0/1:7,0:5:57.83:63,0,58	0/1:13,0:7:13.90:189,0,14	0/1:28,0:17:99:407,0,133	0/1:19,0:13:31.41:31,0,216	0/1:25,11:29:99:522,0,575	0/1:33,11:32:99:413,0,1028	0/1:43,2:45:99:138,0,1362	0/1:27,5:24:99:275,0,562	0/1:25,0:16:99:304,0,249	0/1:20,0:11:77.88:271,0,78	0/0:1,0:1:3.01:0,3,53
chr10	79479801	.	TTG	T	6350.33	PASS	AB=0.755;AC=20;AF=0.357;AN=56;BaseQRankSum=1.370;DP=1116;FS=5.013;HRun=0;HaplotypeScore=198.7234;InbreedingCoeff=-0.5730;MQ=41.84;MQ0=54;MQRankSum=-3.516;QD=7.66;ReadPosRankSum=-0.649;VQSLOD=4.3407;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:42:87.48:0,87,1088	0/1:9,4:10:99:124,0,167	0/1:54,4:13:50.16:50,0,316	0/1:69,5:14:38.52:39,0,328	0/1:23,10:25:99:195,0,563	0/0:30,3:31:10.42:0,10,1157	0/1:32,6:33:99:137,0,937	0/1:32,16:37:99:421,0,745	0/0:18,0:34:78.89:0,79,977	0/1:27,12:24:99:380,0,316	0/1:18,15:19:54.26:367,0,54	0/0:34,2:33:4.41:0,4,1099	0/0:37,4:35:90.17:0,90,1464	0/0:33,3:29:75.26:0,75,1199	0/1:18,26:36:99:676,0,433	0/1:24,26:42:99:730,0,420	0/1:32,7:38:99:119,0,1219	0/1:7,7:11:24.85:218,0,25	0/1:14,7:14:99:169,0,212	0/1:24,15:28:99:372,0,404	0/1:15,26:34:99:543,0,353	0/1:34,16:41:99:340,0,816	0/1:41,12:42:99:267,0,1041	0/1:55,15:69:99:230,0,1848	0/0:35,0:46:99:0,117,1348	0/1:17,17:25:56.89:533,0,57	0/1:19,15:25:99:440,0,271	0/0:5,0:5:12.04:0,12,195
chr10	79479847	.	G	GTGTT	4453.54	PASS	AB=0.881;AC=13;AF=0.250;AN=52;BaseQRankSum=-7.666;DP=1079;FS=69.948;HRun=0;HaplotypeScore=253.6800;InbreedingCoeff=-0.3239;MQ=43.70;MQ0=91;MQRankSum=-0.725;QD=9.70;ReadPosRankSum=5.459;VQSLOD=1.6846;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:57:99:0,138,2288	0/1:8,2:10:99:185,0,347	./.	./.	0/1:24,12:34:99:842,0,896	0/0:31,0:30:69.15:0,69,1144	0/0:31,0:26:66.21:0,66,1093	0/0:47,0:35:28.23:0,28,1268	0/0:49,0:49:99:0,132,2277	0/1:28,1:25:99:163,0,785	0/0:27,0:22:14.66:0,15,934	0/1:29,0:26:1.56:2,0,865	0/0:35,0:30:78.04:0,78,1340	0/0:21,0:16:45.15:0,45,743	0/1:44,11:48:99:678,0,1583	0/1:51,7:51:99:571,0,1849	0/0:44,0:43:99:0,102,1781	0/1:21,2:20:98.06:98,0,808	0/1:21,3:15:99:308,0,494	0/1:38,5:38:99:542,0,1141	0/1:49,7:50:99:375,0,1797	0/0:40,0:34:25.22:0,25,1279	0/0:42,0:33:69.22:0,69,1171	0/0:71,0:70:99:0,178,3002	0/1:47,0:45:99:112,0,1699	0/0:28,0:25:9.72:0,10,1139	0/1:35,5:34:99:290,0,1348	0/1:5,4:9:99:288,0,191
chr10	79479881	.	T	TTGTG	3164.58	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=-1.760;DP=1037;FS=14.142;HRun=0;HaplotypeScore=247.2220;InbreedingCoeff=0.5460;MQ=46.28;MQ0=46;MQRankSum=-0.176;QD=14.65;ReadPosRankSum=-4.313;VQSLOD=1.3812;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:56:90.16:0,90,828	0/0:18,0:17:39.33:0,39,306	0/1:60,0:8:0.64:1,0,245	0/0:47,0:12:30.07:0,30,483	0/0:36,0:35:14.81:0,15,395	0/0:24,0:23:39.10:0,39,647	0/0:38,0:34:37.36:0,37,1294	0/1:39,0:31:39.11:39,0,279	0/0:48,0:47:76.35:0,76,569	0/0:37,0:32:89.15:0,89,667	0/0:25,0:23:41.55:0,42,312	1/1:4,21:27:48.10:1021,48,0	1/1:16,14:29:63.54:1287,64,0	1/1:10,16:21:42.08:926,42,0	0/0:46,0:42:40.08:0,40,449	0/0:50,0:45:46.80:0,47,513	0/0:45,0:44:54.51:0,55,1608	0/0:25,0:22:33.83:0,34,365	0/1:19,0:14:3.30:3,0,80	0/0:36,0:36:63.19:0,63,629	0/0:47,0:43:28.48:0,28,585	0/0:37,0:35:69.07:0,69,1065	0/0:39,0:37:56.86:0,57,1171	0/0:61,0:60:99:0,129,2159	0/0:37,0:36:2.46:0,2,306	0/0:27,0:23:43.66:0,44,331	0/0:38,0:32:37.77:0,38,439	0/1:11,0:11:41.95:42,0,135
chr10	79479890	.	TGC	T	16417.19	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=5.755;DP=978;FS=2.888;HRun=0;HaplotypeScore=156.6949;InbreedingCoeff=0.6424;MQ=47.76;MQ0=24;MQRankSum=2.891;QD=23.16;ReadPosRankSum=0.858;VQSLOD=5.6324;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,38:55:99:1899,132,0	1/1:2,14:15:42.10:606,42,0	0/1:60,0:10:2.05:2,0,307	0/0:43,0:14:24.08:0,24,456	1/1:3,29:31:69.18:976,69,0	0/0:19,0:18:42.13:0,42,752	0/0:38,0:35:96.58:0,97,1587	1/1:3,33:30:84.03:1019,84,0	1/1:20,24:43:89.36:1213,89,0	1/1:12,29:35:99:1517,105,0	1/1:7,17:22:54.09:723,54,0	0/1:30,0:28:21.51:22,0,50	0/1:33,0:29:13.39:122,0,13	0/1:30,0:24:30.96:69,0,31	1/1:14,26:36:75.14:1027,75,0	1/1:9,36:42:75.01:1070,75,0	0/0:39,1:39:89.30:0,89,1856	1/1:9,15:21:60.07:834,60,0	1/1:7,7:11:29.95:337,30,0	1/1:10,27:37:99:1469,102,0	1/1:17,26:39:99:1346,106,0	0/0:36,0:34:84.23:0,84,1415	0/0:34,0:33:57.29:0,57,1391	0/0:58,0:57:99:0,138,2394	0/1:30,0:29:14.07:14,0,497	1/1:6,18:19:49.04:711,49,0	1/1:8,27:29:75.21:1075,75,0	1/1:5,6:11:30.02:366,30,0
chr10	79479892	.	C	CGT	1937.37	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=2.712;DP=962;FS=8.774;HRun=0;HaplotypeScore=205.6798;InbreedingCoeff=0.8530;MQ=47.89;MQ0=21;MQRankSum=-0.520;QD=14.35;ReadPosRankSum=-0.990;VQSLOD=2.4417;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:53:99:0,100,413	0/0:16,0:15:34.65:0,35,145	0/0:60,0:10:11.91:0,12,231	0/0:44,0:14:14.50:0,14,234	0/0:34,0:33:51.36:0,51,213	0/0:19,0:18:39.12:0,39,495	0/0:38,0:35:68.96:0,69,1005	0/0:37,0:31:19.08:0,19,141	0/0:44,0:43:70.86:0,71,295	0/0:40,0:35:79.33:0,79,324	0/0:23,0:22:40.67:0,41,172	1/1:30,0:28:48.01:459,48,0	1/1:35,0:30:52.48:484,52,0	1/1:28,0:22:41.47:385,41,0	0/0:38,0:34:57.55:0,58,236	0/0:42,0:39:61:0,61,254	0/0:39,0:38:85.48:0,85,1206	0/0:23,0:20:47.36:0,47,190	0/1:13,0:11:12.33:12,0,32	0/0:36,0:36:77.16:0,77,318	0/0:43,0:39:53.22:0,53,289	0/0:36,0:34:78.25:0,78,990	0/0:33,0:33:75.24:0,75,951	0/0:57,0:56:99:0,132,1626	1/1:10,19:28:13.11:760,13,0	0/0:23,0:18:39.06:0,39,161	0/0:35,0:29:34.80:0,35,206	0/0:10,0:10:18.81:0,19,78
chr10	79481307	.	TG	T	2229.53	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.582;DP=605;FS=3.925;HRun=1;HaplotypeScore=54.9513;InbreedingCoeff=0.9847;MQ=76.16;MQ0=0;MQRankSum=0.238;QD=34.30;ReadPosRankSum=2.379;VQSLOD=3.4429;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.24:0,78,1202	0/0:15,0:15:45.14:0,45,690	0/0:15,0:15:45.15:0,45,702	0/0:8,0:8:20.86:0,21,298	0/0:30,0:30:90.26:0,90,1362	0/0:27,0:27:81.25:0,81,1244	0/0:16,0:16:48.15:0,48,743	0/0:32,0:32:96.30:0,96,1471	0/0:24,0:24:72.25:0,72,1147	0/0:22,0:22:66.21:0,66,1015	0/0:31,0:31:93.31:0,93,1460	1/1:0,13:13:36.12:503,36,0	1/1:0,30:30:78.24:1072,78,0	1/1:0,22:22:57.19:797,57,0	0/0:30,0:30:90.31:0,90,1434	0/0:23,0:23:66.21:0,66,1030	0/0:20,0:20:60.19:0,60,921	0/0:21,0:21:63.20:0,63,967	0/0:16,0:16:48.16:0,48,764	0/0:16,0:16:48.09:0,48,720	0/0:6,0:6:18.06:0,18,288	0/0:22,0:22:63.14:0,63,929	0/0:31,0:31:90.29:0,90,1408	0/0:15,0:15:45.14:0,45,692	0/0:21,0:21:63.21:0,63,1005	0/0:31,0:31:93.31:0,93,1465	0/0:37,0:35:99:0,111,1743	0/0:4,0:4:12.04:0,12,191
chr10	79481705	.	GAC	G	2892.39	PASS	AB=0.935;AC=32;AF=0.593;AN=54;BaseQRankSum=4.894;DP=567;FS=1.500;HRun=0;HaplotypeScore=116.8430;InbreedingCoeff=0.7369;MQ=62.86;MQ0=11;MQRankSum=-2.316;QD=9.48;ReadPosRankSum=-0.109;VQSLOD=3.3969;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:56.89:0,57,704	1/1:5,0:5:11.83:145,12,0	0/0:42,0:20:29.94:0,30,301	0/0:43,0:24:24.02:0,24,297	1/1:24,1:25:3.80:94,4,0	0/0:21,0:20:51.07:0,51,773	0/0:17,0:17:24.06:0,24,317	1/1:25,0:24:30.03:353,30,0	0/0:19,0:19:11.08:0,11,641	1/1:19,0:19:26.58:354,27,0	./.	1/1:25,1:26:1:142,1,0	1/1:24,1:25:20.24:178,20,0	1/1:20,0:19:11.45:85,11,0	1/1:23,1:24:18.02:168,18,0	1/1:11,0:11:3:28,3,0	0/1:23,0:22:6.29:6,0,557	1/1:10,2:12:24.07:291,24,0	1/1:1,4:5:12.02:134,12,0	1/1:16,0:16:14.91:115,15,0	0/1:23,4:27:9.14:403,0,9	0/0:20,0:20:39.13:0,39,608	0/0:11,0:11:29.77:0,30,413	0/0:24,1:25:25.87:0,26,839	0/0:22,0:20:43.87:0,44,641	1/1:18,1:19:41.78:456,42,0	1/1:20,0:20:12.01:112,12,0	1/1:3,0:3:3:28,3,0
chr10	79481719	.	CACCACACACA	C	5111.75	PASS	AB=0.767;AC=26;AF=0.464;AN=56;BaseQRankSum=1.288;DP=617;FS=4.675;HRun=0;HaplotypeScore=179.2111;InbreedingCoeff=0.7248;MQ=55.06;MQ0=25;MQRankSum=-1.536;QD=19.81;ReadPosRankSum=-2.406;VQSLOD=3.3803;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:75.18:0,75,2016	1/1:7,0:7:14.64:229,15,0	0/0:33,0:11:29.94:0,30,302	0/0:32,0:14:23.92:0,24,297	1/1:5,20:27:3.42:170,3,0	0/0:26,0:23:57.19:0,57,1642	0/0:15,0:15:26.91:0,27,400	1/1:7,14:20:39.02:477,39,0	0/0:22,0:20:56.68:0,57,1741	0/1:3,18:22:58.05:808,0,58	1/1:4,13:17:0.47:1,0,0	0/0:5,0:30:21.24:0,21,236	0/0:2,0:25:9.20:0,9,119	0/0:4,0:27:12.50:0,12,145	1/1:7,2:30:20.57:342,21,0	1/1:1,11:13:6.02:149,6,0	0/0:26,0:23:20.14:0,20,1589	1/1:13,0:13:4.84:375,5,0	1/1:7,0:7:12.02:134,12,0	1/1:4,19:23:27.81:361,28,0	0/1:33,0:29:48.46:441,0,48	0/0:25,0:24:48.16:0,48,1217	0/0:14,0:14:36.10:0,36,926	0/0:28,0:28:72.22:0,72,2446	0/0:21,0:19:50.31:0,50,2086	1/1:18,1:21:26.67:1106,27,0	1/1:2,16:17:11.83:414,12,0	1/1:0,4:4:3.01:104,3,0
chr10	79481721	.	CCACA	C	1182.82	PASS	AB=0.965;AC=26;AF=0.500;AN=52;BaseQRankSum=7.958;DP=629;FS=1.295;HRun=0;HaplotypeScore=153.5877;InbreedingCoeff=0.2152;MQ=54.89;MQ0=27;MQRankSum=-5.583;QD=3.24;ReadPosRankSum=1.046;VQSLOD=2.4083;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:42.61:0,43,685	0/1:7,0:8:3.77:5,0,4	./.	./.	0/1:28,0:28:22.89:23,0,25	0/0:25,0:23:23.82:0,24,507	1/1:6,8:14:6.02:94,6,0	0/0:22,0:20:2.32:0,2,9	0/0:22,0:21:37.96:0,38,644	0/1:23,0:22:15.52:120,0,16	0/1:17,0:17:0:0,0,0	1/1:31,0:30:19.50:154,20,0	1/1:25,0:25:20.44:175,20,0	1/1:27,1:27:8.42:92,8,0	1/1:31,0:31:6.04:152,6,0	0/1:14,0:14:17.79:29,0,18	0/1:21,0:23:27.09:27,0,478	0/1:13,0:14:30.92:54,0,31	0/0:8,0:8:0.47:0,0,1	0/1:25,0:24:0.36:47,0,0	0/0:35,0:30:10.42:0,10,82	0/0:26,0:25:21.06:0,21,376	0/1:14,0:14:32.33:32,0,208	0/0:26,0:27:53.67:0,54,919	0/1:17,3:19:50.68:51,0,664	1/1:22,0:23:9.30:154,9,0	1/1:18,0:17:12.01:110,12,0	1/1:4,0:4:3:27,3,0
chr10	79482395	.	GTTTT	G	4511.65	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=6.590;DP=458;FS=17.845;HRun=13;HaplotypeScore=100.5692;InbreedingCoeff=0.8359;MQ=63.20;MQ0=30;MQRankSum=-3.227;QD=17.15;ReadPosRankSum=0.334;VQSLOD=1.5305;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:12:12.85:77,13,0	1/1:7,1:8:8.95:85,9,0	0/0:52,0:15:10.52:0,11,109	0/0:68,0:17:4.75:0,5,30	1/1:12,1:12:20.92:209,21,0	0/0:16,0:16:33.57:0,34,625	0/0:13,0:13:32.06:0,32,451	1/1:10,23:31:60.06:598,60,0	1/1:5,0:9:20.88:105,21,0	1/1:16,1:17:33.41:353,33,0	1/1:13,0:12:30.23:238,30,0	1/1:5,0:10:21.21:115,21,0	1/1:5,0:9:5.18:76,5,0	1/1:3,0:11:25.22:167,25,0	1/1:11,2:12:23.89:247,24,0	1/1:13,0:13:28.97:345,29,0	0/0:17,0:17:18.45:0,18,559	1/1:7,0:7:2.95:23,3,0	1/1:18,0:13:27:330,27,0	1/1:8,0:9:17.70:158,18,0	1/1:4,0:4:5.98:56,6,0	0/0:8,0:7:15.05:0,15,230	0/0:8,0:7:3.01:0,3,52	0/0:10,0:9:19.95:0,20,212	1/1:10,0:18:46.13:308,46,0	1/1:8,17:24:55.89:667,56,0	1/1:16,0:16:30.80:300,31,0	1/1:3,0:3:5.97:53,6,0
chr10	79482402	.	TTTTTTTG	T	3662.95	PASS	AB=0.988;AC=37;AF=0.661;AN=56;BaseQRankSum=6.681;DP=474;FS=36.692;HRun=0;HaplotypeScore=118.2481;InbreedingCoeff=0.3417;MQ=58.87;MQ0=44;MQRankSum=-1.950;QD=9.07;ReadPosRankSum=0.452;VQSLOD=0.4279;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,8:13:10.48:123,10,0	1/1:8,0:8:4.25:37,4,0	0/1:64,0:13:0.44:0,0,47	0/1:67,0:14:14.82:28,0,15	1/1:11,0:10:4.85:101,5,0	0/0:15,0:15:9.06:0,9,626	0/0:13,0:13:23.50:0,23,320	0/1:32,0:30:41.93:221,0,42	1/1:9,0:9:17.76:209,18,0	0/1:19,0:19:25.25:199,0,25	1/1:14,1:12:11.29:181,11,0	1/1:9,0:8:20.54:260,21,0	1/1:10,0:9:10.56:183,11,0	1/1:11,0:11:29.74:390,30,0	0/1:10,1:9:20.61:122,0,21	1/1:11,0:11:24.77:192,25,0	0/0:17,0:17:15.28:0,15,708	0/1:12,0:12:13.05:13,0,65	1/1:26,0:15:4.24:135,4,0	0/1:13,0:13:0.68:175,0,1	1/1:3,0:3:4.54:27,5,0	0/0:9,0:8:18.35:0,18,240	0/0:6,0:5:2.92:0,3,25	0/0:10,0:9:12.80:0,13,204	1/1:16,1:18:46.42:686,46,0	1/1:22,0:21:9.79:204,10,0	1/1:16,0:16:1.51:129,2,0	1/1:4,0:4:5.61:46,6,0
chr10	79482403	.	TTTTTTG	T	4465.80	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=7.514;DP=474;FS=32.278;HRun=0;HaplotypeScore=107.7766;InbreedingCoeff=0.4927;MQ=57.48;MQ0=45;MQRankSum=-2.234;QD=13.10;ReadPosRankSum=0.938;VQSLOD=2.2336;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:11.83:118,12,0	1/1:7,0:7:5.91:62,6,0	0/0:65,0:12:3.15:0,3,57	0/1:66,0:14:14.28:37,0,14	1/1:10,1:10:17.22:189,17,0	0/0:15,0:15:8.88:0,9,520	0/0:13,0:13:21.38:0,21,269	0/1:32,0:30:23.59:281,0,24	1/1:9,0:9:17.76:190,18,0	0/1:19,0:19:3.24:251,0,3	1/1:15,0:12:26.82:269,27,0	1/1:9,0:8:20.54:234,21,0	1/1:10,0:9:2.98:155,3,0	1/1:11,0:11:29.73:340,30,0	1/1:10,1:9:9.84:153,10,0	1/1:11,0:12:29.25:231,29,0	0/0:17,0:17:1.24:0,1,544	0/1:12,0:12:27.85:28,0,47	1/1:27,0:15:19.75:226,20,0	1/1:13,0:13:20.06:255,20,0	1/1:3,0:3:5.93:53,6,0	0/0:8,0:7:18.41:0,18,210	0/0:6,0:5:2.92:0,3,25	0/0:9,0:8:11.19:0,11,164	1/1:15,4:19:50.70:665,51,0	1/1:23,0:22:38.62:371,39,0	1/1:13,2:15:26.61:282,27,0	1/1:3,0:3:6:77,6,0
chr10	79482404	.	TTTTTG	T	4804.30	PASS	AB=0.922;AC=41;AF=0.732;AN=56;BaseQRankSum=7.703;DP=474;FS=32.127;HRun=0;HaplotypeScore=100.0440;InbreedingCoeff=0.3388;MQ=57.56;MQ0=45;MQRankSum=-3.065;QD=12.85;ReadPosRankSum=0.768;VQSLOD=2.3625;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:11.82:105,12,0	1/1:8,0:8:6.01:63,6,0	0/0:66,0:12:3.22:0,3,48	0/1:64,0:13:15.04:26,0,15	1/1:11,1:11:21.34:243,21,0	0/1:16,0:16:10.73:11,0,417	0/0:12,0:12:6.26:0,6,212	0/1:33,0:30:4.57:319,0,5	1/1:9,0:9:20.73:191,21,0	1/1:17,1:18:8.46:286,8,0	1/1:13,2:12:29.86:348,30,0	1/1:9,0:8:20.54:207,21,0	1/1:10,0:9:1.18:133,1,0	1/1:11,0:11:29.70:289,30,0	1/1:11,0:9:21.90:174,22,0	1/1:12,0:12:29.70:268,30,0	0/1:17,0:17:29.38:29,0,408	0/1:4,7:11:35.16:44,0,35	1/1:28,1:17:26.73:283,27,0	1/1:11,1:12:20.56:264,21,0	1/1:2,1:3:6.02:83,6,0	0/0:8,0:7:18.16:0,18,172	0/0:5,0:4:3:0,3,25	0/0:9,0:8:1.20:0,1,110	1/1:20,0:20:43.81:560,44,0	1/1:23,0:22:49.22:469,49,0	1/1:14,1:15:34.56:317,35,0	1/1:2,1:3:6.02:92,6,0
chr10	79482405	.	TTTTG	T	4694.94	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=7.145;DP=475;FS=33.975;HRun=0;HaplotypeScore=94.3149;InbreedingCoeff=0.3150;MQ=58.63;MQ0=45;MQRankSum=-2.379;QD=12.23;ReadPosRankSum=1.498;VQSLOD=2.6751;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:1.67:77,0,2	1/1:7,0:7:6.01:75,6,0	0/0:65,0:12:4.61:0,5,39	0/1:64,0:13:16.81:21,0,17	1/1:11,1:11:21.42:233,21,0	0/1:16,0:16:10.79:11,0,331	0/0:12,0:12:5.80:0,6,187	0/1:33,0:30:0.05:357,0,0	1/1:9,0:9:20.73:172,21,0	1/1:17,1:18:9.64:288,10,0	1/1:13,1:11:30.02:336,30,0	1/1:9,0:8:20.53:181,21,0	1/1:10,0:9:4.61:116,5,0	1/1:12,0:12:32.65:271,33,0	1/1:11,0:9:23.76:194,24,0	1/1:10,2:12:29.68:261,30,0	0/1:17,0:17:80.75:81,0,299	0/1:11,0:11:31.42:31,0,32	1/1:29,0:17:26.86:286,27,0	1/1:12,0:12:20.63:239,21,0	1/1:4,0:4:6:86,6,0	0/0:8,0:7:15.24:0,15,128	0/0:6,0:5:3:0,3,25	0/1:9,0:8:1.96:2,0,72	1/1:20,0:20:43.81:489,44,0	1/1:21,2:22:50.98:496,51,0	1/1:13,2:15:25.29:305,25,0	1/1:1,2:3:6.02:88,6,0
chr10	79482406	.	TTTG	T	4417.28	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=7.166;DP=472;FS=40.239;HRun=0;HaplotypeScore=88.0035;InbreedingCoeff=0.1220;MQ=58.53;MQ0=45;MQRankSum=-2.137;QD=9.73;ReadPosRankSum=1.326;VQSLOD=2.6508;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:1.71:65,0,2	1/1:1,6:7:5.99:59,6,0	0/1:65,0:11:0.90:1,0,19	0/1:60,0:13:16.22:23,0,16	1/1:12,0:11:21.38:200,21,0	0/1:16,0:16:32.74:33,0,257	0/0:12,0:12:5.68:0,6,164	1/1:32,1:30:3.54:367,4,0	1/1:8,0:8:20.69:152,21,0	1/1:18,0:18:10.61:274,11,0	1/1:12,2:11:30:314,30,0	1/1:11,0:10:23.99:195,24,0	1/1:10,0:9:18.21:144,18,0	1/1:13,0:13:35.48:248,35,0	1/1:11,0:9:23.79:184,24,0	1/1:11,0:11:29.68:234,30,0	0/1:17,0:17:79.47:79,0,210	0/1:11,0:11:25.49:25,0,30	1/1:16,13:17:26.86:291,27,0	1/1:11,0:11:20.62:219,21,0	1/1:4,0:4:5.99:68,6,0	0/1:9,0:8:25:25,0,71	0/0:6,0:5:3:0,3,25	0/1:8,0:7:8.88:9,0,34	1/1:19,0:19:43.71:416,44,0	1/1:22,1:22:51.52:454,52,0	1/1:15,0:15:20.09:268,20,0	1/1:3,0:3:6.02:69,6,0
chr10	79482408	.	TG	T	3634.98	PASS	AB=0.981;AC=43;AF=0.768;AN=56;BaseQRankSum=6.772;DP=467;FS=39.301;HRun=1;HaplotypeScore=78.7364;InbreedingCoeff=0.1523;MQ=58.57;MQ0=45;MQRankSum=-2.950;QD=9.44;ReadPosRankSum=2.014;VQSLOD=-0.6868;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:1.97:50,0,2	1/1:7,0:7:5.36:32,5,0	0/0:57,5:10:0.35:0,0,27	0/1:56,5:12:16.37:42,0,16	1/1:11,0:10:20.10:151,20,0	0/1:16,0:16:35:35,0,175	0/0:13,0:13:5.13:0,5,114	1/1:34,0:31:11.80:360,12,0	1/1:7,0:7:19.91:112,20,0	1/1:17,0:17:11.44:244,11,0	1/1:13,0:10:27.14:192,27,0	1/1:11,0:10:28.12:154,28,0	1/1:9,0:9:23.72:116,24,0	1/1:13,0:13:30.06:171,30,0	1/1:11,0:9:23.75:163,24,0	1/1:11,0:11:29.73:217,30,0	0/1:16,1:17:61.96:91,0,62	0/1:11,0:11:12.98:13,0,27	1/1:28,0:16:26.34:259,26,0	1/1:11,0:11:20.57:187,21,0	1/1:3,1:4:5.94:46,6,0	0/1:10,0:9:39.40:54,0,39	0/0:4,3:6:5.99:0,6,47	0/1:8,0:7:13.17:24,0,13	1/1:19,0:19:41.60:277,42,0	1/1:23,0:22:50.96:373,51,0	1/1:16,0:16:15.71:228,16,0	1/1:3,0:3:5.96:44,6,0
chr10	79482577	.	GTT	G	4827.67	PASS	AB=0.682;AC=29;AF=0.518;AN=56;BaseQRankSum=0.425;DP=344;FS=20.758;HRun=12;HaplotypeScore=63.1624;InbreedingCoeff=0.7756;MQ=70.66;MQ0=0;MQRankSum=3.166;QD=21.65;ReadPosRankSum=1.540;VQSLOD=2.4322;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:11:20.31:0,20,81	1/1:0,4:4:12.03:122,12,0	0/0:11,0:5:11.11:0,11,87	0/1:23,0:20:2.46:2,0,84	1/1:4,14:20:38.55:430,39,0	0/0:11,0:12:30.08:0,30,412	0/0:12,0:13:27.08:0,27,387	1/1:5,25:30:75.16:763,75,0	0/1:0,1:3:9.51:22,0,10	1/1:0,21:22:53.74:601,54,0	1/1:3,8:12:17.74:229,18,0	0/0:2,0:8:20.47:0,20,87	0/0:0,0:9:17.46:0,17,61	0/0:1,0:4:7.60:0,8,62	1/1:0,9:9:24.04:244,24,0	0/1:1,5:6:7.62:134,0,8	0/0:14,0:15:30.09:0,30,424	1/1:2,7:9:21.02:214,21,0	1/1:2,11:14:14.46:253,14,0	1/1:2,16:18:48.06:488,48,0	1/1:1,10:11:30.06:305,30,0	0/0:4,0:4:6.02:0,6,89	0/0:5,0:8:18.05:0,18,252	0/0:13,0:15:35.05:0,35,439	0/0:1,0:8:15.44:0,15,64	1/1:1,22:23:66.14:671,66,0	1/1:0,10:12:11.49:227,11,0	1/1:1,4:5:12.03:122,12,0
chr10	79482603	.	A	AT	1012.88	PASS	AB=0.923;AC=11;AF=0.196;AN=56;BaseQRankSum=-2.671;DP=328;FS=1.710;HRun=8;HaplotypeScore=60.2548;InbreedingCoeff=0.8671;MQ=65.38;MQ0=4;MQRankSum=-4.407;QD=18.09;ReadPosRankSum=0.277;VQSLOD=3.4875;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,12:13:33.01:351,33,0	0/0:4,0:4:12.01:0,12,110	0/0:16,0:9:13.11:0,13,142	0/0:13,0:11:5.74:0,6,55	0/0:18,0:18:48.02:0,48,439	0/0:11,0:11:27.01:0,27,247	0/0:13,0:13:30.01:0,30,274	0/0:22,0:21:48.01:0,48,433	1/1:1,4:5:12.04:138,12,0	0/0:20,0:20:54.03:0,54,494	0/1:11,1:11:1.60:2,0,242	1/1:0,9:9:27.08:311,27,0	1/1:1,5:6:15.04:173,15,0	1/1:0,8:7:18.05:208,18,0	0/0:13,0:12:30.01:0,30,274	0/0:6,0:6:18.01:0,18,165	0/0:10,0:10:27.01:0,27,247	0/0:11,0:10:29.97:0,30,266	0/0:13,0:13:33.02:0,33,302	0/0:14,0:14:27:0,27,247	0/0:9,0:9:23.99:0,24,214	0/0:5,0:5:15.01:0,15,137	0/0:8,0:8:21.01:0,21,192	0/0:16,0:16:45.02:0,45,411	0/0:10,0:10:15.07:0,15,184	0/0:23,0:23:60.03:0,60,549	0/0:13,0:13:36.02:0,36,329	0/0:4,0:4:12.01:0,12,110
chr10	79485040	.	A	AT	147.67	PASS	AC=2;AF=0.042;AN=48;BaseQRankSum=0.304;DP=688;FS=0.000;HRun=5;HaplotypeScore=34.9073;InbreedingCoeff=0.4838;MQ=27.79;MQ0=206;MQRankSum=-2.632;QD=13.42;ReadPosRankSum=0.937;VQSLOD=1.1573;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:17:6.01:0,6,64	./.	./.	./.	0/0:41,0:22:38.93:0,39,388	0/0:31,0:18:24.06:0,24,258	0/0:25,0:6:11.96:0,12,114	0/0:37,0:3:6.01:0,6,64	0/0:27,0:11:18.04:0,18,193	0/0:35,0:22:66.17:0,66,709	0/0:19,0:10:14.90:0,15,144	0/0:12,0:8:9.02:0,9,96	0/0:27,0:18:29.76:0,30,322	0/0:23,0:15:24.06:0,24,258	0/0:28,0:15:27.07:0,27,290	0/0:18,0:10:15.04:0,15,161	0/0:31,0:19:3:0,3,32	0/0:22,0:12:3.01:0,3,32	0/0:27,0:15:36.05:0,36,373	0/0:24,0:18:33.08:0,33,354	./.	0/0:29,0:18:29.86:0,30,278	0/0:28,0:20:47.99:0,48,498	0/0:45,0:24:3.01:0,3,32	1/1:4,7:8:18.06:237,18,0	0/0:32,0:15:39.10:0,39,419	0/0:38,0:25:45.11:0,45,483	0/0:16,0:6:9.02:0,9,97
chr10	79485772	.	CTT	C	3958.39	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=1.506;DP=516;FS=2.884;HRun=14;HaplotypeScore=70.6899;InbreedingCoeff=0.9283;MQ=72.90;MQ0=0;MQRankSum=1.304;QD=14.19;ReadPosRankSum=1.793;VQSLOD=2.8935;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:43:76.36:0,76,376	1/1:0,5:5:15.02:139,15,0	0/0:19,0:16:10.47:0,10,201	0/0:10,0:8:9.91:0,10,106	1/1:7,13:21:32.88:305,33,0	0/0:11,0:11:32.96:0,33,370	0/0:20,0:22:56.54:0,57,674	1/1:7,18:26:38.65:396,39,0	0/0:6,0:15:30.78:0,31,164	1/1:4,8:13:29.71:254,30,0	1/1:4,11:15:23.76:210,24,0	0/0:14,0:15:38.52:0,39,411	0/0:12,0:15:35.59:0,36,440	0/0:21,0:24:47.59:0,48,549	1/1:6,22:29:43.23:445,43,0	1/1:0,9:13:5.35:180,5,0	0/0:20,0:26:57.90:0,58,643	1/1:4,17:23:34:419,34,0	1/1:11,14:28:5.48:199,5,0	1/1:5,7:12:10.16:108,10,0	1/1:7,17:25:11.04:327,11,0	0/0:11,0:11:30.08:0,30,389	0/0:13,0:13:30.07:0,30,386	0/0:11,0:12:29.58:0,30,372	1/1:5,9:15:11.79:158,12,0	1/1:5,11:16:26.80:231,27,0	1/1:6,24:33:59.17:507,59,0	1/1:3,2:5:8.97:78,9,0
chr10	79486806	.	GATGTGATGA	G	3182.55	PASS	AB=0.528;AC=11;AF=0.196;AN=56;BaseQRankSum=6.823;DP=723;FS=4.810;HRun=0;HaplotypeScore=220.5616;InbreedingCoeff=0.8952;MQ=59.04;MQ0=4;MQRankSum=-11.572;QD=17.88;ReadPosRankSum=3.450;VQSLOD=2.4513;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:4,34:38:6.82:339,0,7	0/0:8,0:8:18.06:0,18,409	0/0:24,0:16:43.75:0,44,862	0/0:15,0:12:31.24:0,31,605	0/0:21,0:21:42.14:0,42,982	0/0:31,0:31:93.18:0,93,3184	0/0:15,0:15:45.15:0,45,1321	0/0:36,0:36:45.36:0,45,1584	1/1:2,32:34:42.14:1352,42,0	0/0:30,0:30:89.89:0,90,1780	0/0:18,0:18:41.87:0,42,760	1/1:0,1:30:34.61:296,35,0	1/1:1,1:29:11.74:236,12,0	1/1:0,0:25:16.79:88,17,0	0/0:42,0:42:99:0,114,2407	0/0:33,0:33:56.07:0,56,1647	0/0:17,0:17:48.16:0,48,1754	0/0:21,0:21:46.97:0,47,984	0/0:12,0:12:33.04:0,33,602	0/0:38,0:38:96.03:0,96,1817	0/0:26,0:25:62.98:0,63,1213	0/0:32,0:32:96.33:0,96,3195	0/0:31,0:31:90.31:0,90,3392	0/0:28,0:28:78.27:0,78,2864	1/1:0,22:22:33.11:1049,33,0	0/0:28,0:28:84.01:0,84,1666	0/0:30,0:28:78.19:0,78,1670	0/0:8,0:8:24.08:0,24,529
chr10	79486807	.	ATG	A	678.34	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=12.377;DP=718;FS=4.014;HRun=0;HaplotypeScore=148.8526;InbreedingCoeff=0.8291;MQ=59.09;MQ0=3;MQRankSum=-12.033;QD=3.41;ReadPosRankSum=1.631;VQSLOD=2.6223;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,2:38:16.20:109,16,0	0/0:8,0:8:7.91:0,8,88	0/0:23,1:16:16.47:0,16,545	0/0:15,0:12:9.12:0,9,380	0/0:21,0:21:31.99:0,32,436	0/0:31,0:31:82.69:0,83,1345	0/0:16,0:16:31.47:0,31,667	0/0:35,1:36:58.32:0,58,929	1/1:33,1:34:38.90:224,39,0	0/0:30,0:30:41.59:0,42,478	0/0:18,0:18:19.28:0,19,200	1/1:30,0:30:30.51:136,31,0	1/1:29,0:29:3.15:80,3,0	1/1:25,0:25:15.45:67,15,0	0/0:41,1:42:38.15:0,38,348	0/0:31,1:32:27.16:0,27,307	0/0:17,0:17:45.15:0,45,756	0/1:21,0:21:17.86:18,0,231	0/0:10,0:10:19.94:0,20,247	0/0:38,0:38:43.01:0,43,480	0/0:24,0:23:26.25:0,26,303	0/0:32,0:32:90.29:0,90,1423	0/0:31,0:31:90.30:0,90,1483	0/0:28,0:28:78.26:0,78,1296	1/1:22,0:22:31.87:227,32,0	0/0:28,0:28:31.38:0,31,315	0/0:30,0:28:39.69:0,40,457	0/0:8,0:8:13.88:0,14,121
chr10	79486809	.	GTGA	G	8758.32	PASS	AB=0.784;AC=40;AF=0.714;AN=56;BaseQRankSum=11.005;DP=716;FS=14.197;HRun=0;HaplotypeScore=132.9904;InbreedingCoeff=0.7538;MQ=58.34;MQ0=3;MQRankSum=-2.564;QD=15.81;ReadPosRankSum=1.246;VQSLOD=4.0578;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:38:11.12:82,11,0	1/1:2,7:9:12.04:164,12,0	0/0:24,0:15:6.02:0,6,103	0/0:16,0:12:3.48:0,3,60	0/1:10,11:21:26.82:149,0,27	0/1:28,3:31:62.51:63,0,903	0/0:16,0:16:24.06:0,24,433	1/1:23,13:36:42.09:533,42,0	1/1:34,0:34:41.57:295,42,0	1/1:12,18:30:57.17:760,57,0	1/1:5,13:18:27.09:368,27,0	1/1:30,0:30:33.05:346,33,0	1/1:29,0:29:26.07:255,26,0	1/1:25,0:25:18.04:188,18,0	1/1:10,30:41:90.26:1206,90,0	1/1:8,23:31:51.17:692,51,0	0/0:16,0:16:27.09:0,27,510	1/1:7,13:21:22.96:325,23,0	1/1:6,4:10:12.04:164,12,0	1/1:12,27:39:63.21:859,63,0	1/1:8,15:22:33.11:450,33,0	0/0:30,0:30:57.18:0,57,1068	0/0:32,0:32:63.22:0,63,1179	0/0:28,0:28:48.15:0,48,858	1/1:22,0:22:32.79:243,33,0	1/1:7,22:29:66.21:881,66,0	1/1:11,18:28:42.14:573,42,0	1/1:4,4:8:12.04:164,12,0
chr10	79490823	.	T	TG	2117.76	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-6.346;DP=635;FS=44.153;HRun=8;HaplotypeScore=91.7908;InbreedingCoeff=0.9963;MQ=57.59;MQ0=4;MQRankSum=2.505;QD=19.79;ReadPosRankSum=1.982;VQSLOD=1.1325;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,24:30:46.02:514,46,0	0/0:14,0:14:32.92:0,33,291	0/0:56,0:31:54.75:0,55,509	0/0:43,0:29:56.75:0,57,503	0/0:32,0:31:59.97:0,60,549	0/0:12,0:12:30.01:0,30,274	0/0:26,0:26:53.94:0,54,486	0/0:19,0:19:35.43:0,35,283	1/1:0,9:9:15.02:173,15,0	0/0:28,0:26:59.72:0,60,520	0/0:21,0:21:50.92:0,51,456	1/1:1,17:18:45.13:519,45,0	1/1:4,18:22:39.12:450,39,0	1/1:0,15:15:36.07:400,36,0	0/0:23,0:23:56.23:0,56,502	0/0:22,0:22:62.80:0,63,546	0/0:20,0:19:37.50:0,37,474	0/0:20,0:22:53.87:0,54,476	0/0:11,0:10:30.01:0,30,270	0/0:25,0:25:68.93:0,69,620	0/0:25,0:26:64.74:0,65,541	0/0:13,0:13:32.97:0,33,293	0/0:17,0:18:41.05:0,41,362	0/0:30,0:30:81.04:0,81,740	1/1:13,0:13:35.63:249,36,0	0/0:27,0:27:56.85:0,57,521	0/0:20,0:20:53.87:0,54,473	0/0:19,0:19:54:0,54,487
chr10	79492154	.	AAC	A	2015.99	PASS	AB=0.619;AC=9;AF=0.161;AN=56;BaseQRankSum=7.874;DP=718;FS=1.051;HRun=0;HaplotypeScore=142.5463;InbreedingCoeff=0.9021;MQ=60.93;MQ0=7;MQRankSum=-2.628;QD=13.44;ReadPosRankSum=1.796;VQSLOD=3.4666;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,21:28:12.04:156,12,0	0/0:13,0:13:38.86:0,39,587	0/0:45,0:32:66.07:0,66,928	0/0:30,0:17:42.09:0,42,576	0/0:12,0:12:27.06:0,27,392	0/0:29,0:29:75.03:0,75,1186	0/0:22,0:22:60.16:0,60,923	0/0:39,0:39:90.25:0,90,1356	0/1:9,16:25:2.88:239,0,3	0/0:33,0:33:87.28:0,87,1426	0/0:23,0:23:63.16:0,63,959	1/1:11,17:29:26.25:529,26,0	1/1:3,25:29:22.90:667,23,0	1/1:17,19:37:50.83:588,51,0	0/0:21,0:21:54.18:0,54,891	0/0:20,1:21:45.15:0,45,748	0/0:22,0:22:51.11:0,51,821	0/0:10,0:10:30.08:0,30,460	0/0:23,0:23:63.16:0,63,986	0/0:24,0:24:57.13:0,57,844	0/0:33,0:33:54.16:0,54,883	0/0:31,0:31:75.15:0,75,1109	0/0:26,0:26:75.24:0,75,1244	0/0:29,0:29:75.16:0,75,1213	0/0:23,0:23:59.71:0,60,922	0/0:25,0:25:63.22:0,63,1068	0/0:28,0:28:63.15:0,63,1013	0/0:6,0:6:15.05:0,15,255
chr10	79492196	.	GGC	G	483.31	PASS	AB=0.982;AC=14;AF=0.259;AN=54;BaseQRankSum=10.535;DP=728;FS=26.035;HRun=0;HaplotypeScore=192.6914;InbreedingCoeff=-0.1592;MQ=45.78;MQ0=22;MQRankSum=-2.424;QD=1.66;ReadPosRankSum=0.582;VQSLOD=1.1107;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:26:23.30:23,0,114	0/1:12,0:13:28.92:29,0,141	0/0:64,0:14:8.44:0,8,223	0/0:52,0:13:31.95:0,32,269	0/1:19,0:19:5.76:6,0,104	0/0:23,0:23:19.16:0,19,599	0/0:26,0:26:58.20:0,58,948	0/0:27,0:26:56.68:0,57,453	0/1:20,1:20:19.72:20,0,156	0/1:27,0:27:23.50:23,0,403	0/0:23,0:24:23.78:0,24,153	1/1:28,0:28:17.91:138,18,0	0/1:24,0:23:35.72:201,0,36	0/1:33,0:33:42.19:78,0,42	0/0:23,0:23:19.94:0,20,139	0/0:22,0:22:24.47:0,24,197	0/1:16,1:17:21.23:21,0,413	0/1:14,0:14:13.14:13,0,119	0/1:18,0:16:22.10:22,0,192	0/0:18,0:18:13.85:0,14,205	0/0:39,0:37:46.70:0,47,443	0/1:18,1:19:41.42:41,0,446	0/0:29,0:29:53.78:0,54,805	0/0:38,1:38:9.90:0,10,1166	0/1:29,0:29:24.87:25,0,612	0/0:23,0:22:45.86:0,46,343	0/0:27,0:27:44.16:0,44,243	./.
chr10	79492197	.	GCACACA	G	2963.70	PASS	AB=0.890;AC=24;AF=0.429;AN=56;BaseQRankSum=2.540;DP=729;FS=0.539;HRun=0;HaplotypeScore=216.6785;InbreedingCoeff=0.6742;MQ=45.75;MQ0=21;MQRankSum=-5.788;QD=10.05;ReadPosRankSum=-2.550;VQSLOD=2.3952;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:8.54:0,9,253	1/1:11,0:13:9.02:119,9,0	0/0:63,0:14:3.01:0,3,35	0/0:51,0:13:6.01:0,6,68	0/1:7,9:19:9.46:32,0,9	0/0:21,0:23:45.14:0,45,1015	0/0:26,0:26:42.61:0,43,1207	1/1:19,8:26:15.34:149,15,0	0/0:22,0:21:18.06:0,18,350	1/1:15,10:27:32.74:456,33,0	1/1:8,13:24:11.52:153,12,0	0/0:28,0:28:21.46:0,21,326	0/0:25,0:24:17.89:0,18,304	0/0:33,0:33:6.32:0,6,269	1/1:6,16:23:23.54:295,24,0	1/1:8,14:22:26.88:372,27,0	0/0:15,0:17:39.12:0,39,850	1/1:11,2:14:7.89:277,8,0	0/1:17,1:16:12.49:138,0,12	1/1:10,7:17:11.96:120,12,0	0/1:40,0:38:36.52:72,0,37	0/0:17,0:18:27.09:0,27,621	0/0:27,0:28:42.13:0,42,1068	0/0:39,0:39:69.22:0,69,1841	0/0:19,1:29:25.08:0,25,1089	1/1:14,8:22:30.36:535,30,0	1/1:11,13:27:21.27:449,21,0	0/1:1,0:1:0:0,0,0
chr10	79492235	.	ACACC	A	422.34	PASS	AB=0.983;AC=7;AF=0.125;AN=56;BaseQRankSum=5.791;DP=687;FS=6.083;HRun=0;HaplotypeScore=189.6621;InbreedingCoeff=0.1446;MQ=61.68;MQ0=18;MQRankSum=-5.881;QD=2.82;ReadPosRankSum=0.232;VQSLOD=1.5217;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:28:70.56:197,0,71	0/0:10,0:10:15.08:0,15,189	0/0:25,0:17:41.13:0,41,425	0/0:28,0:17:40.63:0,41,357	0/0:22,0:22:26.52:0,27,226	0/0:21,0:21:59.87:0,60,882	0/0:25,0:25:50.65:0,51,1183	0/0:40,0:38:89.92:0,90,827	0/1:22,0:20:73.97:74,0,121	0/0:25,0:23:6.70:0,7,248	0/0:27,0:27:25.54:0,26,312	1/1:25,1:26:12.95:152,13,0	0/1:15,0:14:31.70:32,0,73	0/1:29,3:32:43.64:59,0,44	0/0:26,0:26:35.64:0,36,325	0/0:23,0:23:24.01:0,24,283	0/0:25,0:24:59.29:0,59,862	0/0:18,0:18:27.59:0,28,255	0/0:21,0:18:41.63:0,42,395	0/0:18,0:17:31.07:0,31,273	0/0:34,0:32:47.54:0,48,422	0/0:17,0:17:46.16:0,46,682	0/0:27,0:27:72.04:0,72,1221	0/0:34,0:33:85.89:0,86,1692	0/0:32,0:31:78.01:0,78,1162	0/0:28,0:27:7.64:0,8,365	0/1:25,0:25:42.23:42,0,145	0/0:11,0:11:10.85:0,11,167
chr10	79492237	.	ACC	A	959.27	PASS	AB=0.757;AC=7;AF=0.125;AN=56;BaseQRankSum=3.159;DP=681;FS=6.574;HRun=4;HaplotypeScore=161.5491;InbreedingCoeff=0.5741;MQ=62.87;MQ0=16;MQRankSum=-1.325;QD=8.20;ReadPosRankSum=-0.612;VQSLOD=-0.4909;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:29:8.28:227,8,0	0/0:10,0:10:25.48:0,25,212	0/0:26,0:18:44.13:0,44,460	0/0:28,0:17:40.63:0,41,357	0/0:23,0:23:29.78:0,30,235	0/0:20,0:20:32.43:0,32,460	0/0:25,0:25:66.36:0,66,828	0/0:42,0:40:94.35:0,94,866	0/1:19,1:19:49.28:118,0,49	0/0:25,0:23:44.66:0,45,320	0/0:28,0:28:42.52:0,43,346	1/1:13,10:23:39.93:421,40,0	0/1:9,3:12:6.12:116,0,6	0/1:9,20:29:4.66:214,0,5	0/0:26,0:26:53.30:0,53,376	0/0:25,0:25:53.86:0,54,418	0/0:23,0:24:30.56:0,31,492	0/0:16,0:17:40.83:0,41,281	0/0:20,0:18:50.21:0,50,437	0/0:18,0:17:38.51:0,39,309	0/0:32,0:31:46.38:0,46,404	0/0:17,0:17:38.93:0,39,494	0/0:26,0:26:54.35:0,54,787	0/0:34,0:33:64.98:0,65,1025	0/0:33,0:32:46.48:0,46,789	0/0:28,0:28:71.75:0,72,545	0/0:25,0:25:41.91:0,42,265	0/0:11,0:11:13.70:0,14,229
chr10	79493142	.	G	GCA	7075.39	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.236;DP=637;FS=7.245;HRun=0;HaplotypeScore=79.3469;InbreedingCoeff=0.9862;MQ=90.04;MQ0=0;MQRankSum=-2.847;QD=50.90;ReadPosRankSum=5.052;VQSLOD=5.2386;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,43:46:99:2318,120,0	0/0:10,0:10:30.10:0,30,459	0/0:27,0:27:77.62:0,78,1117	0/0:22,0:22:60.17:0,60,849	0/0:24,0:24:66.22:0,66,1004	0/0:27,0:27:81.26:0,81,1220	0/0:22,0:22:66.22:0,66,1011	0/0:22,0:22:66.22:0,66,1006	1/1:1,15:18:45.15:849,45,0	0/0:19,0:19:57.17:0,57,848	0/0:4,0:4:9.03:0,9,138	1/1:0,22:22:60.21:1158,60,0	1/1:2,28:30:78.27:1477,78,0	1/1:0,23:23:66.23:1273,66,0	0/0:21,0:21:63.20:0,63,939	0/0:18,0:18:54.17:0,54,804	0/0:27,0:27:81.28:0,81,1241	0/0:27,0:27:75.25:0,75,1141	0/0:18,0:18:51.17:0,51,777	0/0:31,0:31:90.31:0,90,1374	0/0:39,0:39:99:0,117,1790	0/0:14,0:14:42.14:0,42,642	0/0:18,0:18:51.17:0,51,777	0/0:21,0:21:60.18:0,60,893	0/0:24,0:24:72.24:0,72,1087	0/0:26,0:26:78.26:0,78,1189	0/0:28,0:28:84.27:0,84,1257	0/0:9,0:9:27.09:0,27,413
chr10	79494058	.	ATG	A	1950.27	PASS	AB=0.941;AC=13;AF=0.232;AN=56;BaseQRankSum=11.657;DP=598;FS=7.863;HRun=0;HaplotypeScore=90.0986;InbreedingCoeff=0.8342;MQ=58.58;MQ0=5;MQRankSum=-2.591;QD=14.45;ReadPosRankSum=2.095;VQSLOD=3.1535;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,13:28:42.11:494,42,0	0/0:15,0:14:31.23:0,31,469	0/0:15,0:8:15.02:0,15,171	0/1:15,1:12:24.70:25,0,96	0/0:29,0:29:62.07:0,62,1074	0/0:23,0:23:45.55:0,46,843	0/0:23,0:22:47.88:0,48,752	0/0:40,0:40:88.92:0,89,1361	1/1:10,11:21:51.05:596,51,0	0/0:24,1:25:60.14:0,60,941	0/0:18,0:18:53.97:0,54,834	1/1:2,12:14:29.91:314,30,0	1/1:15,11:26:29.86:293,30,0	1/1:5,7:12:27.05:294,27,0	0/0:26,0:26:59.58:0,60,890	0/0:21,0:21:53.65:0,54,809	0/0:18,1:19:2.53:0,3,512	0/0:15,0:15:39.13:0,39,594	0/0:20,0:20:48:0,48,658	0/0:28,0:27:75.22:0,75,1177	0/0:23,0:21:60.15:0,60,894	0/0:15,1:16:3.51:0,4,578	0/0:14,0:14:32.56:0,33,478	0/0:15,0:15:38.45:0,38,569	1/1:17,0:17:21.12:123,21,0	0/0:24,0:24:59.87:0,60,914	0/0:41,0:40:99:0,110,1672	0/0:13,0:13:21.06:0,21,328
chr10	79494065	.	TGTGTGC	T	2150.08	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=10.698;DP=611;FS=13.430;HRun=0;HaplotypeScore=134.9097;InbreedingCoeff=0.8687;MQ=57.09;MQ0=5;MQRankSum=-3.273;QD=18.22;ReadPosRankSum=2.802;VQSLOD=2.4302;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:27:20.07:204,20,0	0/0:14,0:13:32.47:0,32,868	0/0:16,0:8:11.68:0,12,82	0/1:16,0:8:12.87:13,0,37	0/0:30,0:30:78.95:0,79,2048	0/0:29,0:29:80.57:0,81,1680	0/0:24,0:23:50.67:0,51,1337	0/0:41,0:41:96.79:0,97,1549	1/1:20,0:20:48.51:252,49,0	0/0:26,0:26:72.09:0,72,1573	0/0:20,0:20:45.16:0,45,1315	1/1:16,0:16:30.10:639,30,0	1/1:12,12:24:30.10:641,30,0	1/1:14,0:14:33.04:578,33,0	0/0:28,0:28:69.14:0,69,1625	0/0:21,0:21:56.96:0,57,1446	0/0:19,0:19:41.96:0,42,1042	0/0:15,0:15:44.95:0,45,919	0/0:20,0:20:53.94:0,54,1065	0/0:30,0:29:78.12:0,78,1877	0/0:25,0:23:62.98:0,63,1374	0/0:15,0:15:42.10:0,42,1034	0/0:14,0:14:36.98:0,37,909	0/0:15,0:15:39.09:0,39,1065	0/0:19,0:19:8:0,8,393	0/0:23,0:23:65.73:0,66,1445	0/0:41,0:40:99:0,120,2966	0/0:8,0:8:21.07:0,21,589
chr10	79494067	.	T	TGC	305.15	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=8.692;DP=611;FS=5.041;HRun=0;HaplotypeScore=98.3812;InbreedingCoeff=0.5258;MQ=57.10;MQ0=5;MQRankSum=1.427;QD=2.85;ReadPosRankSum=2.882;VQSLOD=1.8023;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:0.71:34,1,0	0/0:14,0:13:36.09:0,36,504	0/0:15,0:8:18.04:0,18,243	0/0:16,0:8:6:0,6,180	0/0:30,0:30:87.21:0,87,1204	0/0:31,0:31:81.15:0,81,1036	0/0:24,0:23:51.09:0,51,753	0/0:36,0:36:99:0,103,1421	1/1:20,0:20:7.19:78,7,0	0/0:26,0:26:72.21:0,72,1015	0/0:20,0:20:60.18:0,60,867	0/0:16,0:16:10.72:0,11,43	0/1:24,0:24:3.55:4,0,33	0/1:14,0:14:12.57:13,0,68	0/0:28,0:28:75.17:0,75,1017	0/0:20,0:20:57.17:0,57,823	0/0:19,0:19:41.99:0,42,574	0/0:15,0:15:45.11:0,45,634	0/0:20,0:20:39.37:0,39,693	0/0:30,0:29:81.10:0,81,1135	0/0:25,0:23:69.14:0,69,920	0/0:15,0:15:41.99:0,42,583	0/0:14,0:14:39.10:0,39,550	0/0:15,0:15:39.13:0,39,595	1/1:6,14:21:2.90:297,3,0	0/0:24,0:24:66.19:0,66,966	0/0:41,0:40:99:0,120,1734	0/0:10,0:10:25.30:0,25,328
chr10	79494071	.	CGT	C	1016.14	PASS	AB=0.914;AC=18;AF=0.321;AN=56;BaseQRankSum=11.668;DP=617;FS=7.733;HRun=0;HaplotypeScore=93.6367;InbreedingCoeff=0.1907;MQ=55.82;MQ0=6;MQRankSum=0.193;QD=3.41;ReadPosRankSum=3.704;VQSLOD=1.1169;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,13:28:36.10:381,36,0	0/1:11,0:11:16.76:17,0,362	0/0:14,0:7:7.36:0,7,56	0/1:18,0:10:22.53:23,0,81	0/0:29,1:31:9.43:0,9,1019	0/0:30,3:33:39.99:0,40,1053	0/0:23,1:23:18.38:0,18,755	0/1:35,1:36:2.81:3,0,694	1/1:7,14:21:35.96:375,36,0	0/0:26,0:26:25.47:0,25,745	0/0:18,1:19:8.97:0,9,564	1/1:9,0:17:7.22:84,7,0	1/1:14,0:23:20.36:100,20,0	0/1:9,0:16:3.17:74,0,3	0/1:24,3:27:11.55:12,0,733	0/0:19,1:20:9.39:0,9,628	0/1:18,1:19:22.58:23,0,446	0/0:17,0:17:33.04:0,33,468	0/0:19,1:19:3.34:0,3,479	0/0:30,0:29:72.21:0,72,1074	0/0:27,0:24:54.06:0,54,755	0/0:14,0:15:35.78:0,36,483	0/1:13,1:15:47.79:48,0,388	0/1:13,2:15:38.41:38,0,392	0/0:20,0:20:32.27:0,32,272	0/0:22,1:23:9.37:0,9,582	0/1:37,3:40:7.95:8,0,1253	0/1:9,0:9:5.64:6,0,326
chr10	79495046	.	TACACACACACAC	T	477.95	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=2.898;DP=582;FS=18.890;HRun=0;HaplotypeScore=196.9649;InbreedingCoeff=0.5710;MQ=63.17;MQ0=12;MQRankSum=-1.036;QD=4.78;ReadPosRankSum=0.805;VQSLOD=0.9508;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,23:38:6.02:140,6,0	0/0:9,0:9:9:0,9,178	0/1:31,0:9:0:0,0,0	0/0:36,0:16:6.01:0,6,55	0/0:15,0:15:15.05:0,15,291	0/0:14,0:14:21.06:0,21,506	0/0:19,0:21:33.08:0,33,548	0/0:15,0:14:9.02:0,9,111	1/1:9,8:17:12.04:411,12,0	0/0:18,0:20:35.45:0,35,823	0/0:15,0:16:18.05:0,18,765	0/0:21,0:26:14.66:0,15,466	0/0:23,0:28:33.65:0,34,934	0/0:25,0:29:20.60:0,21,658	0/0:19,0:17:12.03:0,12,390	0/0:23,0:22:20.07:0,20,481	0/0:28,0:29:48.60:0,49,1375	0/0:13,0:14:27.09:0,27,629	0/0:20,0:20:33.06:0,33,643	0/0:10,0:9:9:0,9,97	0/0:37,0:36:28.75:0,29,547	0/0:14,0:16:33.11:0,33,787	0/0:11,0:10:12.04:0,12,233	0/0:34,0:37:66.22:0,66,2115	0/1:14,0:14:23.85:42,0,24	0/0:17,0:17:33.09:0,33,657	0/0:13,0:12:12.04:0,12,431	0/0:4,0:4:8.96:0,9,151
chr10	79495083	.	A	ACG	2765.36	PASS	AB=0.919;AC=24;AF=0.444;AN=54;BaseQRankSum=1.427;DP=648;FS=31.475;HRun=0;HaplotypeScore=114.7963;InbreedingCoeff=0.1970;MQ=47.81;MQ0=24;MQRankSum=1.126;QD=6.54;ReadPosRankSum=0.183;VQSLOD=1.3165;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:36:10.80:161,11,0	1/1:5,0:6:8.97:90,9,0	0/0:8,0:1:3:0,3,25	./.	0/1:20,0:20:81.08:222,0,81	0/0:17,0:16:33.35:0,33,283	0/0:27,0:27:24.70:0,25,397	0/1:27,0:22:21.66:55,0,22	1/1:17,0:16:29:194,29,0	0/1:20,0:18:99:150,0,116	0/1:14,0:14:43.87:44,0,160	1/1:36,1:37:14.04:314,14,0	1/1:34,1:34:10.19:366,10,0	1/1:28,3:32:20.93:321,21,0	0/1:17,0:14:26.02:95,0,26	0/1:31,0:29:99:137,0,106	0/0:32,0:32:65.53:0,66,728	0/0:23,0:22:51.65:0,52,460	0/1:25,0:23:14.44:184,0,14	0/1:5,9:12:8.95:91,0,9	0/1:17,42:58:30.32:240,0,30	0/0:22,0:22:26.82:0,27,496	0/0:13,0:12:13.09:0,13,168	0/0:34,0:34:32.56:0,33,757	0/1:16,0:16:99:135,0,104	0/0:24,0:23:54.50:0,54,507	1/1:12,0:10:17.96:153,18,0	0/0:6,0:4:6.89:0,7,31
chr10	79495087	.	ACG	A	211.73	PASS	AB=0.972;AC=12;AF=0.214;AN=56;BaseQRankSum=4.357;DP=648;FS=29.474;HRun=0;HaplotypeScore=120.7755;InbreedingCoeff=-0.1600;MQ=48.48;MQ0=23;MQRankSum=-1.613;QD=0.75;ReadPosRankSum=-2.555;VQSLOD=0.2736;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:37:38.71:0,39,306	0/0:5,1:6:8.97:0,9,73	0/1:10,0:3:18.14:18,0,24	0/0:16,0:5:11.90:0,12,91	0/0:19,0:19:36.40:0,36,336	0/0:16,1:16:0.64:0,1,242	0/0:28,0:28:18.73:0,19,412	0/0:26,0:21:3.32:0,3,118	0/0:19,0:18:32.74:0,33,207	0/1:20,0:18:36.18:36,0,252	0/0:13,0:13:18.01:0,18,260	0/1:38,0:38:12.64:13,0,356	0/1:31,1:31:39.01:39,0,338	0/1:29,2:31:14.69:15,0,249	0/0:19,0:16:32.84:0,33,302	0/0:30,0:28:22.04:0,22,225	0/0:33,0:33:6.10:0,6,662	0/1:23,0:22:12.24:12,0,268	0/1:20,6:24:99:110,0,184	0/1:13,0:11:11.40:25,0,11	0/1:60,0:57:20.74:46,0,21	0/0:22,0:22:39.84:0,40,466	0/0:15,0:14:1.81:0,2,168	0/0:34,0:34:5.14:0,5,689	0/0:16,0:16:31.89:0,32,252	0/1:24,0:23:19.08:19,0,346	0/0:12,0:10:5.92:0,6,124	1/1:6,0:4:5.23:24,5,0
chr10	79496400	.	G	GAA	7814.74	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-1.427;DP=517;FS=27.582;HRun=9;HaplotypeScore=94.9938;InbreedingCoeff=0.9697;MQ=74.45;MQ0=1;MQRankSum=-8.141;QD=29.71;ReadPosRankSum=-2.070;VQSLOD=2.8226;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:34:78.12:0,78,885	1/1:1,4:7:17.55:239,18,0	0/0:18,0:15:20.80:0,21,212	0/0:19,0:19:22.69:0,23,215	1/1:7,20:29:60.49:829,60,0	0/0:27,0:27:72.17:0,72,766	0/0:27,0:27:72.13:0,72,758	1/1:3,7:12:26.03:315,26,0	0/0:16,0:16:39.08:0,39,415	1/1:11,13:25:54.83:722,55,0	1/1:4,7:12:22.84:285,23,0	1/1:4,0:14:32.20:269,32,0	1/1:3,0:11:21:193,21,0	1/1:8,0:20:39.04:381,39,0	1/1:1,8:10:24.45:333,24,0	1/1:2,12:14:36.12:554,36,0	0/0:31,0:31:64.51:0,65,842	1/1:0,6:6:15.05:231,15,0	1/1:3,10:14:34.82:474,35,0	1/1:8,16:24:54.09:754,54,0	1/1:2,4:6:9.03:139,9,0	0/0:25,0:25:63.12:0,63,671	0/0:35,0:36:89.92:0,90,930	0/0:17,0:17:45.19:0,45,498	1/1:5,0:15:41.98:391,42,0	1/1:2,17:19:51.15:761,51,0	1/1:0,23:23:57.17:853,57,0	1/1:0,2:2:6.02:92,6,0
chr10	79496750	.	AT	A	12146.81	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=18.189;DP=596;FS=45.809;HRun=4;HaplotypeScore=151.7041;InbreedingCoeff=0.9946;MQ=74.75;MQ0=0;MQRankSum=-11.417;QD=31.15;ReadPosRankSum=-1.806;VQSLOD=0.4701;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.20:0,60,840	1/1:0,6:6:18.06:215,18,0	0/0:19,0:19:45.07:0,45,559	0/0:13,0:13:36.12:0,36,497	1/1:4,22:26:71.70:722,72,0	0/0:30,0:30:87.29:0,87,1215	0/0:16,0:16:48.15:0,48,655	1/1:3,24:27:75.23:899,75,0	0/0:23,0:23:66.22:0,66,924	1/1:4,27:31:81.25:967,81,0	1/1:3,16:19:41.87:406,42,0	1/1:1,22:23:66.20:789,66,0	1/1:2,24:26:75.18:871,75,0	1/1:1,21:22:66.05:740,66,0	1/1:1,22:23:68.98:748,69,0	1/1:3,17:20:18.14:617,18,0	0/0:24,0:24:72.24:0,72,1008	1/1:1,5:6:15.05:180,15,0	1/1:4,18:22:57.17:674,57,0	1/1:2,18:20:54.12:631,54,0	1/1:1,16:17:42.04:484,42,0	0/0:20,0:20:54.17:0,54,740	0/0:27,0:27:78.24:0,78,1059	0/0:13,0:13:36.06:0,36,465	1/1:4,17:21:60.08:665,60,0	1/1:3,22:25:75.22:889,75,0	1/1:4,40:44:99:1399,123,0	1/1:5,7:12:21.06:252,21,0
chr10	79496780	.	GA	G	11216.30	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=15.156;DP=550;FS=10.588;HRun=4;HaplotypeScore=111.3590;InbreedingCoeff=0.9846;MQ=67.68;MQ0=0;MQRankSum=-10.194;QD=30.15;ReadPosRankSum=0.410;VQSLOD=3.6347;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.17:0,60,805	1/1:0,6:6:15.05:180,15,0	0/0:12,0:12:33.07:0,33,422	0/0:8,0:8:15.02:0,15,190	1/1:2,19:21:48.14:575,48,0	0/0:33,0:33:99:0,99,1386	0/0:13,0:13:39.13:0,39,546	1/1:3,25:28:72.21:852,72,0	0/0:18,0:18:54.18:0,54,756	1/1:2,25:27:75.23:899,75,0	1/1:2,17:19:48.15:575,48,0	1/1:4,24:28:63.19:755,63,0	1/1:2,29:31:75.23:898,75,0	1/1:3,19:22:54.16:647,54,0	1/1:1,24:25:72.22:863,72,0	1/1:1,18:19:12.15:569,12,0	0/0:20,0:20:60.20:0,60,840	1/1:0,8:8:24.07:288,24,0	1/1:6,16:22:54.05:602,54,0	1/1:2,17:19:39.12:467,39,0	1/1:2,7:9:18.04:205,18,0	0/0:15,0:15:39.13:0,39,546	0/0:28,0:28:84.27:0,84,1158	0/0:11,0:11:33.11:0,33,462	1/1:3,12:15:39.12:467,39,0	1/1:2,23:25:69.21:828,69,0	1/1:3,41:44:99:1402,117,0	1/1:0,4:4:12.04:144,12,0
chr10	79496961	.	G	GC	17115.44	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=14.919;DP=582;FS=1.522;HRun=1;HaplotypeScore=82.3793;InbreedingCoeff=0.9936;MQ=67.01;MQ0=0;MQRankSum=-1.687;QD=41.04;ReadPosRankSum=0.785;VQSLOD=5.3018;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.19:0,69,865	1/1:0,14:14:42.14:628,42,0	0/0:8,0:8:17.24:0,17,184	0/0:6,0:6:14.07:0,14,152	1/1:4,41:45:99:1723,117,0	0/0:31,0:31:93.30:0,93,1208	0/0:7,0:7:18.06:0,18,233	1/1:1,33:34:99:1481,99,0	0/0:22,0:22:66.21:0,66,856	1/1:0,21:20:60.20:898,60,0	1/1:2,31:33:90.22:1319,90,0	1/1:0,15:15:45.15:673,45,0	1/1:0,24:24:66.22:979,66,0	1/1:1,24:25:66.22:983,66,0	1/1:0,16:16:48.16:718,48,0	1/1:1,13:14:39.13:583,39,0	0/0:22,0:21:63.20:0,63,817	1/1:2,8:10:24.08:359,24,0	1/1:0,23:23:69.22:1012,69,0	1/1:8,31:39:96.26:1407,96,0	1/1:0,13:13:36.12:539,36,0	0/0:15,0:15:45.15:0,45,584	0/0:17,0:17:48.16:0,48,623	0/0:13,0:13:33.09:0,33,413	1/1:0,19:19:54.18:809,54,0	1/1:1,21:22:27.24:880,27,0	1/1:1,41:42:99:1765,120,0	1/1:0,8:8:24.08:359,24,0
chr10	79497774	.	A	AT	1383.83	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.009;DP=588;FS=8.692;HRun=9;HaplotypeScore=62.4256;InbreedingCoeff=0.9738;MQ=83.79;MQ0=0;MQRankSum=-1.503;QD=13.98;ReadPosRankSum=3.047;VQSLOD=3.1210;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:22:42.11:465,42,0	0/0:4,0:4:12:0,12,104	0/0:16,0:18:8.82:0,9,161	0/0:19,0:19:38.86:0,39,325	0/0:27,1:28:41.80:0,42,592	0/0:28,0:28:77.96:0,78,673	0/0:28,0:28:77.96:0,78,673	0/0:25,0:26:62.01:0,62,524	1/1:1,16:17:39.11:431,39,0	0/0:27,0:27:77.97:0,78,677	0/0:23,0:23:59.98:0,60,520	1/1:1,0:16:31.25:156,31,0	1/1:3,1:19:39.94:218,40,0	1/1:2,0:25:56.93:289,57,0	0/0:23,0:23:59.99:0,60,521	0/0:21,0:21:53.97:0,54,465	0/0:26,0:26:65.97:0,66,573	0/0:12,0:12:26.99:0,27,234	0/0:20,1:21:14.79:0,15,357	0/0:25,0:25:65.94:0,66,567	0/0:22,0:22:56.98:0,57,495	0/0:18,0:19:50.02:0,50,423	0/0:26,0:26:68.98:0,69,599	0/0:15,0:15:38.99:0,39,339	0/0:18,0:19:47.02:0,47,397	0/0:19,0:19:41.98:0,42,365	0/0:31,0:32:82.99:0,83,705	0/0:8,0:8:20.99:0,21,182
chr10	79498949	.	GA	G	484.59	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.081;DP=569;FS=1.726;HRun=8;HaplotypeScore=55.0221;InbreedingCoeff=0.9849;MQ=77.25;MQ0=1;MQRankSum=-1.037;QD=22.03;ReadPosRankSum=0.724;VQSLOD=3.9914;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:48.15:0,48,580	0/0:9,0:9:27.08:0,27,326	0/0:19,0:19:36.22:0,36,399	0/0:14,0:14:36.05:0,36,407	0/0:29,0:29:87.24:0,87,1026	0/0:22,0:22:60.16:0,60,701	0/0:17,0:17:45.14:0,45,544	0/0:29,0:29:69.19:0,69,813	0/0:11,0:11:30.09:0,30,362	0/0:37,0:37:99:0,102,1204	0/0:32,0:32:93.26:0,93,1109	0/0:21,0:21:57.17:0,57,678	0/0:15,0:15:42.13:0,42,506	0/0:17,0:17:39.12:0,39,471	0/0:15,0:15:42.13:0,42,507	0/0:26,0:26:78.21:0,78,919	0/0:26,0:26:69.21:0,69,833	0/0:18,0:18:48.11:0,48,553	0/0:26,0:26:78.23:0,78,925	0/0:27,0:27:75.22:0,75,895	0/0:10,0:10:30.08:0,30,352	0/0:14,0:14:39.12:0,39,471	0/0:16,1:17:16.14:0,16,457	0/0:14,0:14:42.09:0,42,490	1/1:0,22:22:60.10:579,60,0	0/0:27,0:27:75.20:0,75,882	0/0:22,0:22:57.16:0,57,676	0/0:10,0:10:30.09:0,30,362
chr10	79499538	.	CA	C	2700.53	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.754;DP=734;FS=3.290;HRun=4;HaplotypeScore=68.4977;InbreedingCoeff=0.9992;MQ=90.94;MQ0=0;MQRankSum=-1.698;QD=32.93;ReadPosRankSum=2.686;VQSLOD=4.4877;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1469	0/0:17,0:17:51.15:0,51,684	0/0:32,0:32:78.24:0,78,1054	0/0:26,0:26:66.12:0,66,868	0/0:29,0:29:87.28:0,87,1201	0/0:30,0:30:87.26:0,87,1167	0/0:15,0:15:36.12:0,36,504	0/0:35,0:35:99:0,102,1400	0/0:23,0:23:69.22:0,69,949	0/0:40,0:40:99:0,114,1553	0/0:22,0:22:63.20:0,63,862	1/1:0,28:28:81.25:972,81,0	1/1:1,22:23:63.19:756,63,0	1/1:0,31:31:93.29:1116,93,0	0/0:34,0:33:99:0,99,1385	0/0:33,0:33:96.31:0,96,1329	0/0:27,0:27:78.26:0,78,1092	0/0:18,0:18:45.15:0,45,627	0/0:16,0:16:36.11:0,36,488	0/0:28,0:28:75.24:0,75,1033	0/0:25,0:25:75.22:0,75,1014	0/0:22,0:22:66.22:0,66,924	0/0:28,0:28:81.25:0,81,1100	0/0:21,0:21:63.21:0,63,882	0/0:23,0:23:69.23:0,69,966	0/0:32,0:32:93.29:0,93,1255	0/0:33,0:33:96.31:0,96,1325	0/0:8,0:8:24.08:0,24,336
chr10	79499952	.	C	CT	1416.02	PASS	AB=0.960;AC=7;AF=0.125;AN=56;BaseQRankSum=-5.186;DP=625;FS=6.073;HRun=9;HaplotypeScore=67.5544;InbreedingCoeff=0.8671;MQ=76.84;MQ0=1;MQRankSum=-1.697;QD=16.28;ReadPosRankSum=0.848;VQSLOD=3.7497;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:65.98:0,66,572	0/0:11,0:11:23.99:0,24,208	0/0:24,0:21:14.32:0,14,297	0/1:22,1:16:1.38:1,0,138	0/0:35,0:35:86.96:0,87,751	0/0:19,0:20:53.02:0,53,449	0/0:16,0:17:41.01:0,41,344	0/0:27,0:28:59.01:0,59,499	0/0:17,0:18:47.02:0,47,397	0/0:23,0:23:53.96:0,54,469	0/0:31,1:32:53.80:0,54,696	1/1:6,13:19:36.57:399,37,0	1/1:5,20:25:57.15:627,57,0	1/1:2,17:19:48.13:531,48,0	0/0:27,0:26:80.98:0,81,703	0/0:19,0:19:53.99:0,54,469	0/0:39,0:40:99:0,110,937	0/0:23,0:23:56.91:0,57,487	0/0:14,0:14:23.98:0,24,208	0/0:28,0:28:77.97:0,78,677	0/0:10,0:10:26.98:0,27,231	0/0:19,0:19:47.95:0,48,413	0/0:22,0:22:56.95:0,57,489	0/0:15,0:15:44.99:0,45,391	0/0:24,0:24:68.97:0,69,595	0/0:35,0:35:86.94:0,87,752	0/0:20,0:20:50.95:0,51,439	0/0:9,0:9:6.92:0,7,165
chr10	79500072	.	AT	A	542.31	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.673;DP=555;FS=4.047;HRun=8;HaplotypeScore=54.5448;InbreedingCoeff=0.9877;MQ=73.91;MQ0=0;MQRankSum=-0.213;QD=18.08;ReadPosRankSum=0.911;VQSLOD=3.4739;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.20:0,75,880	0/0:12,0:12:27.08:0,27,326	0/0:14,0:13:30:0,30,312	0/0:11,0:11:17.95:0,18,201	0/0:33,0:33:93.14:0,93,1092	0/0:22,1:23:37.20:0,37,711	0/0:17,0:17:48.13:0,48,567	0/0:18,0:18:42.13:0,42,507	0/0:19,0:19:57.16:0,57,677	0/0:18,0:18:51.14:0,51,605	0/0:28,0:28:75.22:0,75,895	0/0:21,0:21:63.18:0,63,749	0/0:25,0:25:63.16:0,63,730	0/0:14,0:14:39.12:0,39,471	0/0:18,0:18:51.15:0,51,606	0/0:22,0:21:54.17:0,54,652	0/0:24,0:24:60.07:0,60,681	0/0:17,0:17:48.13:0,48,567	0/0:14,0:14:33.10:0,33,399	0/0:26,0:26:75.19:0,75,889	0/0:12,0:12:33.10:0,33,391	0/0:20,0:20:57.17:0,57,688	0/0:23,0:23:60.18:0,60,722	0/0:9,0:9:27.08:0,27,326	1/1:6,24:30:66.07:637,66,0	0/0:28,0:28:78.24:0,78,935	0/0:22,0:21:54.17:0,54,652	0/0:9,0:9:27.08:0,27,326
chr10	79501083	.	AAT	A	2209.91	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.348;DP=542;FS=0.000;HRun=0;HaplotypeScore=65.3838;InbreedingCoeff=0.9881;MQ=78.47;MQ0=1;MQRankSum=-3.918;QD=35.08;ReadPosRankSum=1.912;VQSLOD=5.3534;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.26:0,81,1455	0/0:4,0:4:12.04:0,12,223	0/0:17,0:17:40.31:0,40,539	0/0:16,0:16:44.58:0,45,526	0/0:36,0:36:99:0,108,1934	0/0:15,0:15:45.14:0,45,805	0/0:14,0:14:42.14:0,42,754	0/0:35,0:35:99:0,99,1715	0/0:13,0:13:36.12:0,36,668	0/0:32,0:31:93.28:0,93,1650	0/0:16,0:16:48.08:0,48,852	1/1:0,26:25:66.22:942,66,0	1/1:0,17:17:48.16:684,48,0	1/1:0,20:20:51.17:727,51,0	0/0:15,0:15:45.12:0,45,734	0/0:14,0:14:42.13:0,42,728	0/0:18,0:18:54.19:0,54,1001	0/0:15,0:15:45.12:0,45,782	0/0:21,0:21:60.02:0,60,1013	0/0:28,0:28:82.43:0,82,1393	0/0:9,0:9:27.09:0,27,503	0/0:9,0:9:27.08:0,27,472	0/0:24,0:24:72.25:0,72,1327	0/0:10,0:10:30.09:0,30,528	0/0:23,0:23:66.19:0,66,1132	0/0:21,0:21:63.21:0,63,1139	0/0:32,0:32:96.27:0,96,1649	0/0:15,0:15:45.15:0,45,836
chr10	79501382	.	ATTC	A	1832.63	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.662;DP=593;FS=4.784;HRun=0;HaplotypeScore=81.0451;InbreedingCoeff=0.9994;MQ=87.29;MQ0=0;MQRankSum=-3.624;QD=35.93;ReadPosRankSum=2.869;VQSLOD=4.0884;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.21:0,60,1309	0/0:11,0:11:33.11:0,33,729	0/0:27,0:27:75.25:0,75,1496	0/0:14,0:14:33.11:0,33,716	0/0:30,0:30:87.30:0,87,1896	0/0:27,0:27:78.27:0,78,1720	0/0:20,0:20:48.16:0,48,1042	0/0:34,0:34:99:0,99,2082	0/0:19,0:19:51.18:0,51,1118	0/0:31,0:30:90.31:0,90,1981	0/0:18,0:18:51.18:0,51,1126	1/1:0,16:16:36.12:578,36,0	1/1:1,17:18:45.15:723,45,0	1/1:2,15:17:42.14:674,42,0	0/0:34,0:34:99:0,99,2134	0/0:22,0:22:60.21:0,60,1293	0/0:14,0:14:36.12:0,36,795	0/0:13,0:13:36.12:0,36,793	0/0:22,0:22:57.20:0,57,1238	0/0:25,0:25:66.23:0,66,1407	0/0:11,0:11:33.11:0,33,728	0/0:17,0:17:48.16:0,48,1033	0/0:19,0:19:57.20:0,57,1258	0/0:13,0:13:39.13:0,39,858	0/0:32,0:32:81.28:0,81,1725	0/0:18,0:18:42.14:0,42,928	0/0:34,0:33:90.29:0,90,1884	0/0:14,0:14:33.08:0,33,643
chr10	79501806	.	TTGAG	T	3390.35	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.480;DP=831;FS=2.876;HRun=0;HaplotypeScore=167.9213;InbreedingCoeff=0.9890;MQ=59.40;MQ0=7;MQRankSum=-5.121;QD=47.09;ReadPosRankSum=1.109;VQSLOD=4.1914;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:63.22:0,63,1565	0/0:9,0:9:27.08:0,27,648	0/0:34,0:16:38.16:0,38,958	0/0:42,0:32:59.97:0,60,1587	0/0:25,0:25:66.21:0,66,1701	0/0:20,0:20:57.18:0,57,1439	0/0:33,0:33:99:0,99,2409	0/0:58,0:58:99:0,160,4035	0/0:33,0:33:99:0,99,2563	0/0:32,0:32:96.19:0,96,2439	0/0:33,0:33:90.26:0,90,2136	1/1:0,22:22:54.19:1036,54,0	1/1:4,17:21:56.82:943,57,0	1/1:4,25:29:78.21:1411,78,0	0/0:31,0:31:75.73:0,76,2398	0/0:27,0:27:81.28:0,81,2109	0/0:33,0:32:90.25:0,90,2260	0/0:34,0:34:84.23:0,84,2090	0/0:18,0:18:51.17:0,51,1350	0/0:29,0:29:81.26:0,81,2105	0/0:48,0:48:99:0,120,2980	0/0:25,0:25:69.22:0,69,1820	0/0:20,0:20:57.18:0,57,1420	0/0:36,0:36:96.33:0,96,2515	0/0:28,0:28:78.24:0,78,1987	0/0:36,0:36:99:0,99,2541	0/0:25,0:25:71.91:0,72,1785	0/0:15,0:15:12.14:0,12,699
chr10	79501851	.	A	AGT	17774.20	PASS	AB=0.606;AC=39;AF=0.696;AN=56;BaseQRankSum=-7.069;DP=911;FS=3.028;HRun=0;HaplotypeScore=152.6439;InbreedingCoeff=0.8707;MQ=63.52;MQ0=2;MQRankSum=-0.082;QD=29.72;ReadPosRankSum=2.306;VQSLOD=6.1466;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,1:38:63:572,63,0	1/1:0,7:7:18.02:268,18,0	0/0:65,0:49:4.79:0,5,743	0/0:64,0:42:54.93:0,55,743	0/1:7,13:20:60.95:637,0,61	0/0:24,0:24:66.21:0,66,825	0/0:24,0:24:54.17:0,54,675	1/1:17,26:44:66.17:987,66,0	1/1:15,0:24:53.64:425,54,0	1/1:4,30:34:93.30:1502,93,0	1/1:5,23:29:42.44:1010,42,0	1/1:13,0:26:44.19:399,44,0	1/1:9,3:27:60.25:595,60,0	1/1:12,1:34:75.41:663,75,0	1/1:18,24:42:53.24:1458,53,0	1/1:8,16:24:28.69:972,29,0	0/0:40,0:40:80.53:0,81,972	1/1:13,19:32:4.61:602,5,0	1/1:8,9:17:36.12:589,36,0	1/1:6,26:32:72.25:1188,72,0	1/1:7,62:70:89.25:1980,89,0	0/0:29,0:29:78.24:0,78,963	0/0:26,0:26:58.45:0,58,835	0/0:36,0:37:90.12:0,90,1099	1/1:12,12:24:25.65:893,26,0	1/1:2,28:32:87.26:1378,87,0	1/1:8,18:26:40.85:1175,41,0	1/1:3,11:14:21.80:482,22,0
chr10	79501930	.	C	CTGTG	3141.90	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=8.570;DP=910;FS=2.021;HRun=0;HaplotypeScore=219.0681;InbreedingCoeff=0.8739;MQ=62.25;MQ0=13;MQRankSum=-5.307;QD=18.59;ReadPosRankSum=0.864;VQSLOD=3.5792;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,6:37:18.99:848,19,0	0/0:9,0:9:27.01:0,27,301	0/0:55,0:20:49.25:0,49,625	0/0:65,0:34:57.93:0,58,916	0/0:22,0:22:56.95:0,57,612	0/0:20,0:20:51.97:0,52,795	0/0:29,0:29:84.19:0,84,1284	0/0:49,0:49:99:0,132,1978	1/1:7,16:29:39.43:853,39,0	0/0:37,0:37:99:0,108,1472	0/0:20,0:20:53.93:0,54,619	1/1:22,0:22:16.05:230,16,0	1/1:26,0:26:11.96:710,12,0	0/1:28,0:28:38.94:157,0,39	0/0:40,0:39:99:0,105,1141	0/0:30,0:30:80.88:0,81,979	0/0:48,0:48:99:0,144,2445	0/0:17,0:17:21.43:0,21,448	0/0:16,0:16:48.08:0,48,660	0/0:34,0:33:83.80:0,84,934	0/0:73,0:73:99:0,165,2022	0/0:37,0:37:99:0,99,1696	0/0:21,0:20:53.76:0,54,912	0/0:34,0:34:93.23:0,93,1736	1/1:9,3:27:26.53:519,27,0	0/0:39,0:37:99:0,108,1368	0/0:31,0:31:68.50:0,68,803	0/0:15,0:15:44.80:0,45,429
chr10	79501932	.	C	CTG	9356.72	PASS	AB=0.738;AC=28;AF=0.500;AN=56;BaseQRankSum=-1.414;DP=933;FS=0.367;HRun=0;HaplotypeScore=173.8396;InbreedingCoeff=0.0881;MQ=61.24;MQ0=13;MQRankSum=-1.431;QD=15.16;ReadPosRankSum=0.465;VQSLOD=4.8503;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:38:58.17:545,58,0	0/1:5,4:9:16.13:211,0,16	0/0:52,0:19:9.01:0,9,90	0/0:64,0:32:2.08:0,2,22	1/1:8,15:24:7.95:558,8,0	0/0:21,0:21:34.83:0,35,336	0/0:30,0:30:30.64:0,31,390	0/1:44,6:50:99:188,0,119	1/1:29,0:29:42.36:396,42,0	0/1:25,12:39:24.62:726,0,25	0/1:12,6:19:46.41:354,0,46	1/1:25,0:25:18.54:341,19,0	1/1:26,0:26:25.68:326,26,0	1/1:30,0:30:16.44:352,16,0	0/1:17,23:40:29.48:854,0,29	0/1:13,17:30:17.20:642,0,17	0/0:44,0:48:83.55:0,84,865	1/1:13,4:17:6.85:214,7,0	0/1:14,3:17:44.34:208,0,44	0/1:18,14:32:57.33:777,0,57	0/1:55,18:73:99:942,0,199	0/0:37,0:39:71.71:0,72,687	0/0:19,0:20:35.47:0,35,334	0/0:35,0:39:68.66:0,69,713	1/1:29,0:29:29.01:236,29,0	0/1:29,9:37:82.94:531,0,83	0/1:15,18:33:15.08:512,0,15	0/1:8,8:16:43.16:443,0,43
chr10	79501955	.	T	TGTGC	3453.51	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=10.898;DP=870;FS=7.113;HRun=0;HaplotypeScore=198.0828;InbreedingCoeff=0.5817;MQ=62.13;MQ0=10;MQRankSum=-1.636;QD=19.51;ReadPosRankSum=4.262;VQSLOD=2.6956;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:42:99:507,0,166	0/0:8,0:8:5.63:0,6,79	0/0:50,0:25:35.48:0,35,692	0/0:42,0:20:45.31:0,45,483	0/0:26,0:26:27.36:0,27,238	0/0:21,0:21:53.43:0,53,756	0/0:28,0:28:69.09:0,69,975	0/0:33,0:33:62.45:0,62,676	0/1:31,0:31:99:483,0,129	0/0:41,0:41:58.80:0,59,592	0/0:20,0:20:29.99:0,30,338	1/1:14,0:22:45.54:586,46,0	1/1:4,20:28:44.99:957,45,0	1/1:22,0:32:56.84:608,57,0	0/0:36,0:36:23.80:0,24,295	0/0:28,0:28:15.54:0,16,203	0/0:42,0:42:99:0,114,1726	0/0:12,0:12:22.47:0,22,177	0/0:22,0:22:37.48:0,37,374	0/0:36,0:35:45.64:0,46,511	0/0:62,0:62:86.23:0,86,1033	0/0:38,0:38:99:0,105,1542	0/0:17,0:16:48.04:0,48,689	0/0:36,0:36:89.86:0,90,1377	0/1:22,0:22:16.84:312,0,17	0/0:40,0:38:62.07:0,62,681	0/0:34,0:34:27.50:0,27,288	0/0:20,0:20:28.28:0,28,318
chr10	79506997	.	TA	T	1508.57	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.927;DP=534;FS=14.238;HRun=7;HaplotypeScore=72.0765;InbreedingCoeff=0.9336;MQ=70.81;MQ0=0;MQRankSum=-0.699;QD=24.73;ReadPosRankSum=2.375;VQSLOD=3.0839;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:45.14:0,45,566	0/0:3,0:3:9.02:0,9,100	0/0:13,0:13:5.63:0,6,209	0/0:9,0:9:24.03:0,24,279	0/0:28,0:28:75.10:0,75,916	0/0:28,0:28:75.24:0,75,943	0/0:13,0:13:39.10:0,39,464	0/0:29,0:29:78.23:0,78,959	0/0:11,0:11:15.04:0,15,179	0/0:26,0:26:72.20:0,72,889	0/0:23,0:23:63.20:0,63,793	1/1:0,14:14:42.10:428,42,0	1/1:2,27:29:72.14:733,72,0	1/1:1,17:18:48.11:489,48,0	0/0:17,0:17:48.14:0,48,591	0/0:13,0:13:33.10:0,33,409	0/0:28,0:28:81.26:0,81,1016	0/0:14,0:14:39.08:0,39,460	0/0:25,0:25:75.22:0,75,914	0/0:37,0:37:99:0,105,1308	0/0:13,0:13:33.11:0,33,415	0/0:19,0:19:51.15:0,51,630	0/0:10,0:10:30.07:0,30,351	0/0:10,0:10:24.06:0,24,289	0/0:14,0:14:33.11:0,33,414	0/0:32,0:32:93.30:0,93,1170	0/0:30,0:30:81.26:0,81,1019	0/0:7,0:7:21.07:0,21,264
chr10	79507040	.	T	TAA	529.98	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=3.914;DP=439;FS=0.909;HRun=0;HaplotypeScore=92.3154;InbreedingCoeff=0.6074;MQ=71.39;MQ0=2;MQRankSum=-1.554;QD=16.06;ReadPosRankSum=1.518;VQSLOD=3.7381;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:38.83:0,39,314	0/0:8,0:8:21.07:0,21,334	0/0:15,0:5:12.03:0,12,155	0/1:11,0:10:6.53:7,0,88	0/0:21,0:21:63:0,63,877	0/0:20,0:20:60.20:0,60,969	0/0:6,0:6:18.06:0,18,288	0/0:17,0:17:51.17:0,51,795	0/0:10,0:10:13.52:0,14,100	0/0:25,0:25:75.11:0,75,1137	0/0:16,0:15:48.16:0,48,779	0/0:14,0:14:38.56:0,39,480	0/0:25,0:25:68.29:0,68,900	0/0:11,0:11:30.97:0,31,419	0/0:15,0:15:42.14:0,42,678	0/0:9,0:9:27.09:0,27,438	0/0:24,0:24:69.23:0,69,1090	0/0:15,0:15:36.12:0,36,578	0/0:24,0:24:70.12:0,70,990	0/0:30,0:30:90.14:0,90,1399	0/0:4,0:4:9.03:0,9,146	0/0:14,0:14:39.13:0,39,633	0/0:10,0:10:30.10:0,30,490	0/0:4,0:4:12.04:0,12,190	1/1:5,15:22:40.41:623,40,0	0/0:17,0:17:51.17:0,51,793	0/0:31,0:31:74.78:0,75,1186	0/0:4,0:4:12.04:0,12,195
chr10	79507042	.	T	TA	6682.59	PASS	AB=0.913;AC=36;AF=0.643;AN=56;BaseQRankSum=-7.996;DP=446;FS=0.945;HRun=9;HaplotypeScore=62.8002;InbreedingCoeff=0.6234;MQ=71.14;MQ0=2;MQRankSum=-0.759;QD=19.60;ReadPosRankSum=0.431;VQSLOD=5.0971;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,1:18:35.49:251,35,0	1/1:0,8:8:21.06:232,21,0	0/0:15,0:5:6.35:0,6,37	0/0:10,0:10:0.99:0,1,34	1/1:1,18:20:56.81:553,57,0	0/0:22,0:22:53.91:0,54,457	0/0:6,0:6:14.97:0,15,124	1/1:4,14:18:42.04:419,42,0	1/1:1,0:11:14.91:108,15,0	1/1:2,22:24:66.14:709,66,0	1/1:4,16:19:42.11:464,42,0	0/1:13,0:13:12.94:54,0,13	0/1:25,0:25:23.19:23,0,30	0/1:9,0:9:5.33:37,0,5	1/1:1,13:14:36.10:398,36,0	1/1:1,8:9:24.06:265,24,0	0/0:24,0:24:56.82:0,57,469	1/1:2,14:16:33.09:365,33,0	1/1:5,17:23:27.78:443,28,0	1/1:3,27:31:83.90:867,84,0	1/1:0,4:4:9.02:100,9,0	0/0:14,0:14:29.96:0,30,256	0/0:10,0:10:26.99:0,27,234	0/0:3,0:3:9:0,9,78	1/1:24,0:25:58.20:304,58,0	0/1:8,9:17:18.98:250,0,19	1/1:4,28:32:68.86:740,69,0	1/1:1,3:4:9.02:100,9,0
chr10	79507242	.	C	CA	909.08	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.562;DP=513;FS=1.432;HRun=9;HaplotypeScore=53.6198;InbreedingCoeff=0.9010;MQ=71.89;MQ0=0;MQRankSum=-2.465;QD=19.76;ReadPosRankSum=1.479;VQSLOD=3.9559;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:47.98:0,48,417	0/0:1,0:2:5.04:0,5,32	0/0:12,0:12:24.82:0,25,185	0/0:12,0:10:17.02:0,17,133	0/0:34,0:34:86.95:0,87,751	0/0:20,0:20:47.98:0,48,417	0/0:10,0:10:29.99:0,30,260	0/0:33,0:33:86.96:0,87,753	0/0:10,0:10:23.99:0,24,208	0/0:20,0:20:50.97:0,51,442	0/0:28,0:28:68.94:0,69,595	1/1:4,11:15:10.04:339,10,0	1/1:5,12:17:13.05:372,13,0	1/1:2,12:14:30.08:332,30,0	0/0:17,0:17:38.98:0,39,339	0/0:18,0:18:47.98:0,48,417	0/0:24,0:24:59.97:0,60,521	0/0:18,0:18:41.94:0,42,364	0/0:19,1:20:14.77:0,15,355	0/0:29,0:29:71.96:0,72,621	0/0:16,0:16:38.93:0,39,332	0/0:25,0:25:59.97:0,60,521	0/0:21,0:21:50.98:0,51,443	0/0:11,0:11:26.98:0,27,234	0/0:2,0:19:32.59:0,33,96	0/0:14,0:14:35.96:0,36,308	0/0:31,0:31:80.98:0,81,703	0/0:3,0:3:9:0,9,78
chr10	79508396	.	TA	T	1257.28	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.714;DP=604;FS=0.000;HRun=9;HaplotypeScore=62.9999;InbreedingCoeff=0.9910;MQ=70.48;MQ0=1;MQRankSum=0.536;QD=17.96;ReadPosRankSum=1.067;VQSLOD=3.8117;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:75.04:686,75,0	0/0:11,0:11:30.08:0,30,336	0/0:20,1:20:20.64:0,21,464	0/0:17,0:12:18.55:0,19,204	0/0:11,0:11:30.09:0,30,346	0/0:32,0:32:71.92:0,72,977	0/0:16,0:16:41.31:0,41,483	0/0:35,0:36:87.08:0,87,975	1/1:3,17:20:39.02:357,39,0	0/0:24,0:24:66.19:0,66,754	0/0:18,0:18:44.97:0,45,519	0/0:25,0:25:69.19:0,69,786	0/0:30,0:30:81.22:0,81,928	0/0:17,0:17:42.12:0,42,485	0/0:37,0:37:84.24:0,84,960	0/0:31,0:31:90.27:0,90,1038	0/0:27,0:27:69.20:0,69,793	0/0:16,0:16:42.11:0,42,474	0/0:15,0:15:36.09:0,36,406	0/0:8,0:8:21.06:0,21,242	0/0:15,0:15:36.11:0,36,416	0/0:25,0:25:63.18:0,63,719	0/0:22,0:22:57.12:0,57,635	0/0:18,0:18:48.14:0,48,551	1/1:3,15:18:39.01:357,39,0	0/0:29,1:30:52.31:0,52,833	0/0:25,0:25:66.67:0,67,763	0/0:7,0:7:18.05:0,18,208
chr10	79508772	.	GAT	G	546.82	PASS	AB=0.819;AC=21;AF=0.700;AN=30;BaseQRankSum=2.141;DP=244;FS=1.292;HRun=0;HaplotypeScore=36.8159;InbreedingCoeff=0.2740;MQ=72.68;MQ0=2;MQRankSum=-1.265;QD=4.21;ReadPosRankSum=0.714;VQSLOD=1.1062;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:6,0:7:2.84:14,3,0	0/1:6,1:7:36.94:39,0,37	1/1:2,0:3:2.68:11,3,0	1/1:19,0:22:14.16:94,14,0	./.	1/1:10,0:12:0.47:1,0,0	1/1:3,0:10:5.87:38,6,0	./.	./.	./.	1/1:11,0:15:8.52:42,9,0	./.	0/0:12,0:17:15.02:0,15,188	1/1:13,2:18:6.79:139,7,0	0/1:8,0:10:0.44:20,0,0	0/0:5,0:5:3.01:0,3,46	./.	./.	./.	./.	1/1:6,5:11:15.04:169,15,0	1/1:5,1:6:3.01:34,3,0	0/1:6,3:9:36.69:59,0,37	0/0:5,0:5:6.02:0,6,83
chr10	79511141	.	A	AC	23314.18	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-16.519;DP=770;FS=11.778;HRun=1;HaplotypeScore=71.6914;InbreedingCoeff=0.9903;MQ=64.85;MQ0=13;MQRankSum=-0.869;QD=42.08;ReadPosRankSum=4.986;VQSLOD=4.2604;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:39:99:1582,99,0	1/1:0,14:14:42.14:671,42,0	0/0:44,0:39:83.46:0,83,1378	0/0:41,0:28:70.71:0,71,892	1/1:0,24:24:63.21:1002,63,0	0/0:19,0:19:51.17:0,51,713	0/0:15,1:16:45.14:0,45,611	1/1:1,41:40:99:1685,114,0	1/1:0,22:21:57.19:911,57,0	1/1:0,31:31:90.31:1419,90,0	1/1:0,19:19:57.19:911,57,0	1/1:0,28:28:72.25:1151,72,0	1/1:0,29:29:81.26:1294,81,0	1/1:0,26:25:75.26:1196,75,0	1/1:0,34:34:87.30:1391,87,0	1/1:1,38:38:99:1775,111,0	0/0:34,0:34:99:0,99,1380	1/1:0,24:24:63.21:1006,63,0	1/1:1,14:15:36.12:576,36,0	1/1:0,22:21:60.20:959,60,0	1/1:3,45:46:99:1822,114,0	0/0:18,0:18:54.18:0,54,750	0/0:20,0:20:51.16:0,51,688	0/0:24,0:24:69.23:0,69,965	1/1:0,25:24:63.21:1007,63,0	1/1:0,33:34:99:1572,102,0	1/1:0,35:34:78.08:1239,78,0	1/1:0,3:3:9.03:144,9,0
chr10	79513182	.	GA	G	997.11	PASS	AB=0.883;AC=17;AF=0.304;AN=56;BaseQRankSum=9.333;DP=567;FS=4.271;HRun=15;HaplotypeScore=73.1028;InbreedingCoeff=0.4986;MQ=68.11;MQ0=3;MQRankSum=1.202;QD=4.32;ReadPosRankSum=3.623;VQSLOD=1.4675;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,18:27:50:326,50,0	0/0:7,1:9:2.93:0,3,132	0/0:31,0:13:9.41:0,9,70	0/0:15,1:9:6.40:0,6,41	0/1:19,2:23:29.15:29,0,194	0/0:17,1:21:6.15:0,6,279	0/0:20,1:22:14.43:0,14,329	0/1:29,0:29:4.67:5,0,250	1/1:4,11:15:28.06:177,28,0	0/1:17,5:22:58.55:59,0,136	0/0:22,0:22:43.53:0,44,369	1/1:8,0:19:19.60:57,20,0	1/1:7,0:14:12.69:38,13,0	1/1:4,1:21:33.29:107,33,0	0/0:25,1:27:17.51:0,18,392	0/0:18,0:19:35.99:0,36,406	0/0:21,3:25:5.46:0,5,305	0/0:9,0:9:20.98:0,21,178	0/1:17,1:19:16.75:17,0,132	0/0:25,1:27:20.64:0,21,444	0/0:7,0:7:8.73:0,9,61	0/0:14,0:18:34.88:0,35,301	0/0:20,0:21:28.59:0,29,303	0/0:15,0:17:14.15:0,14,138	1/1:4,22:26:56:364,56,0	0/0:16,1:18:2.25:0,2,216	0/0:25,0:25:50.81:0,51,430	0/1:12,2:15:3.55:4,0,232
chr10	79518953	.	CTT	C	833.68	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-2.257;DP=573;FS=3.129;HRun=14;HaplotypeScore=82.4287;InbreedingCoeff=0.7597;MQ=69.90;MQ0=3;MQRankSum=0.997;QD=11.91;ReadPosRankSum=5.044;VQSLOD=2.7995;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:35:27.01:0,27,210	0/0:1,0:10:15.20:0,15,148	0/1:17,0:12:4.97:5,0,99	0/0:9,0:5:2.89:0,3,17	0/0:12,0:23:42.53:0,43,319	0/0:17,0:19:47.57:0,48,539	0/0:12,0:15:31.54:0,32,318	0/0:19,0:28:55.13:0,55,500	0/0:4,0:8:5.97:0,6,49	0/0:15,0:34:67.49:0,67,598	0/0:3,0:18:44.82:0,45,387	1/1:2,13:15:35.85:333,36,0	1/1:4,21:25:53.95:500,54,0	1/1:6,7:13:14.89:138,15,0	0/0:2,0:18:27.04:0,27,258	0/0:8,0:22:30:0,30,287	0/0:29,0:32:86.12:0,86,1000	0/0:3,0:11:8.98:0,9,80	0/0:14,0:22:45.01:0,45,429	0/0:4,0:23:54.74:0,55,474	0/0:0,0:10:15.02:0,15,143	0/0:15,0:17:44.51:0,45,505	0/0:25,0:27:68.14:0,68,802	0/0:22,0:22:54.49:0,54,598	0/0:12,0:30:29.51:0,30,204	0/0:7,0:33:75.31:0,75,668	0/0:8,0:29:46.48:0,46,410	0/0:1,0:5:11.92:0,12,102
chr10	79521842	.	TTA	T	15097.54	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=11.451;DP=554;FS=1.918;HRun=0;HaplotypeScore=88.7233;InbreedingCoeff=0.9967;MQ=85.29;MQ0=0;MQRankSum=-5.690;QD=41.03;ReadPosRankSum=3.077;VQSLOD=6.9616;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:36.08:525,36,0	1/1:0,10:10:27.09:413,27,0	0/0:16,0:16:44.98:0,45,762	0/0:19,0:19:34.52:0,35,869	1/1:1,31:32:87.25:1306,87,0	0/0:17,0:17:51.16:0,51,941	0/0:20,0:20:60.18:0,60,1114	1/1:1,30:31:90.29:1337,90,0	1/1:0,18:18:51.17:781,51,0	1/1:1,32:33:96.28:1425,96,0	1/1:0,36:36:96.23:1417,96,0	0/0:11,0:11:33.10:0,33,603	0/0:24,0:24:72.23:0,72,1329	0/0:16,0:16:48.16:0,48,916	1/1:0,17:17:51.17:781,51,0	1/1:0,28:28:72.24:1103,72,0	0/0:12,0:12:33.11:0,33,637	1/1:0,9:9:21.07:321,21,0	1/1:2,15:17:45.14:663,45,0	1/1:1,30:31:84.24:1260,84,0	1/1:0,5:5:15.05:230,15,0	0/0:10,0:10:30.09:0,30,546	0/0:19,0:19:54.17:0,54,1009	0/0:22,0:22:66.23:0,66,1263	1/1:1,14:15:30.10:459,30,0	1/1:0,23:23:69.23:1057,69,0	1/1:0,37:37:99:1561,102,0	1/1:0,12:12:30.10:459,30,0
chr10	79522136	.	CAAA	C	19081.79	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=15.144;DP=631;FS=3.007;HRun=3;HaplotypeScore=96.1184;InbreedingCoeff=0.9994;MQ=70.94;MQ0=0;MQRankSum=-2.813;QD=48.31;ReadPosRankSum=0.546;VQSLOD=4.6097;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:45.15:835,45,0	1/1:0,15:15:41.88:735,42,0	0/0:10,0:10:27.08:0,27,521	0/0:14,0:14:38.94:0,39,771	1/1:0,24:24:66.23:1212,66,0	0/0:41,0:41:99:0,123,3003	0/0:17,0:17:51.16:0,51,1207	1/1:0,36:36:99:1681,108,0	1/1:0,22:22:57.20:1058,57,0	1/1:0,30:30:87.14:1478,87,0	1/1:0,23:23:62.78:1048,63,0	0/0:15,0:15:45.15:0,45,1109	0/0:39,0:39:99:0,117,2673	0/0:25,0:25:75.24:0,75,1749	1/1:0,19:19:51.17:943,51,0	1/1:0,27:27:78.27:1446,78,0	0/0:15,0:15:45.15:0,45,1083	1/1:0,11:11:27.09:501,27,0	1/1:0,15:15:44.98:789,45,0	1/1:0,34:34:96.01:1689,96,0	1/1:0,15:15:26.96:425,27,0	0/0:19,0:19:57.11:0,57,1299	0/0:29,0:29:87.27:0,87,2015	0/0:12,0:12:36.12:0,36,859	1/1:0,16:15:42.14:769,42,0	1/1:0,35:35:99:1877,105,0	1/1:0,42:42:99:2042,111,0	1/1:0,10:10:30.10:555,30,0
chr10	79522237	.	TA	T	1657.44	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.200;DP=592;FS=3.280;HRun=5;HaplotypeScore=59.1061;InbreedingCoeff=0.9614;MQ=73.51;MQ0=0;MQRankSum=0.468;QD=29.60;ReadPosRankSum=1.805;VQSLOD=4.3671;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.16:0,69,904	0/0:4,0:4:6.02:0,6,82	0/0:11,1:12:29.68:0,30,359	0/0:9,0:9:24.96:0,25,320	0/0:31,0:31:90.28:0,90,1212	0/0:29,0:29:87.27:0,87,1172	0/0:11,0:11:33.11:0,33,450	0/0:31,0:31:87.28:0,87,1172	0/0:21,0:21:57.18:0,57,765	0/0:33,0:33:84.28:0,84,1146	0/0:31,0:31:90.26:0,90,1209	1/1:1,14:15:42.12:476,42,0	1/1:1,24:25:69.20:783,69,0	1/1:1,15:16:48.13:541,48,0	0/0:18,0:18:48.15:0,48,642	0/0:26,0:26:75.24:0,75,1010	0/0:16,0:16:42.13:0,42,558	0/0:8,0:8:24.08:0,24,328	0/0:17,0:17:42.14:0,42,575	0/0:37,0:37:99:0,108,1457	0/0:13,0:13:39.12:0,39,518	0/0:18,0:18:54.18:0,54,738	0/0:21,0:21:63.20:0,63,846	0/0:15,0:15:42.10:0,42,553	0/0:29,0:29:87.29:0,87,1183	0/0:37,0:37:99:0,111,1491	0/0:35,0:35:96.31:0,96,1296	0/0:9,0:9:24.08:0,24,328
chr10	79523064	.	T	TCC	5311.61	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-5.185;DP=289;FS=12.400;HRun=7;HaplotypeScore=30.3042;InbreedingCoeff=0.8296;MQ=62.53;MQ0=5;MQRankSum=0.456;QD=24.59;ReadPosRankSum=0.803;VQSLOD=2.0124;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,7:9:12.04:197,12,0	1/1:1,3:4:6.02:98,6,0	0/0:4,0:1:3.01:0,3,35	0/0:9,0:5:3:0,3,34	1/1:3,14:17:39.13:640,39,0	0/0:12,0:12:36.11:0,36,419	0/0:10,0:10:27.08:0,27,314	1/1:6,15:20:42.04:578,42,0	1/1:3,9:12:11.61:196,12,0	1/1:3,11:11:24.04:365,24,0	1/1:0,8:8:15.05:244,15,0	1/1:0,0:6:12.82:49,13,0	1/1:1,0:9:15.48:70,15,0	1/1:1,0:12:22.46:79,22,0	1/1:1,10:11:15.04:225,15,0	1/1:5,13:17:27.09:423,27,0	0/0:12,0:12:27.03:0,27,291	1/1:2,11:13:24.08:393,24,0	1/1:1,1:2:6.01:76,6,0	1/1:1,10:11:27.05:414,27,0	1/1:2,5:7:3.01:49,3,0	0/0:7,0:7:21.06:0,21,244	0/0:13,0:13:36.10:0,36,419	0/0:6,0:6:18.04:0,18,198	1/1:2,15:17:36.12:589,36,0	1/1:0,6:5:12.03:174,12,0	1/1:5,10:13:24.08:393,24,0	1/1:0,1:2:5.51:58,6,0
chr10	79523507	.	ATC	A	927.10	PASS	AC=30;AF=0.577;AN=52;BaseQRankSum=-0.314;DP=246;FS=66.830;HRun=0;HaplotypeScore=38.2583;InbreedingCoeff=0.7383;MQ=55.15;MQ0=3;MQRankSum=-1.195;QD=10.91;ReadPosRankSum=-5.857;VQSLOD=0.4213;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:8.98:73,9,0	1/1:2,0:2:3:25,3,0	0/0:5,0:3:8.98:0,9,79	0/0:5,1:3:5.75:0,6,43	1/1:4,0:4:3:25,3,0	0/0:28,0:28:55.29:0,55,1248	0/0:16,0:15:42.09:0,42,660	1/1:5,0:5:11.99:102,12,0	1/1:3,0:3:3:25,3,0	1/1:10,0:9:20.93:178,21,0	1/1:4,0:4:5.99:50,6,0	0/0:5,0:5:8.99:0,9,75	0/0:2,0:2:5.99:0,6,50	0/0:5,0:5:11.98:0,12,99	1/1:5,0:5:5.99:50,6,0	1/1:8,0:8:9.46:75,9,0	0/0:33,0:33:93.24:0,93,1576	1/1:2,0:2:5.95:44,6,0	./.	1/1:5,0:5:2.99:25,3,0	1/1:5,0:4:8.62:70,9,0	0/0:17,0:17:48.15:0,48,864	0/0:27,0:27:53.73:0,54,1114	0/0:14,0:14:39.10:0,39,664	1/1:10,0:9:5.22:117,5,0	1/1:0,4:4:9:78,9,0	1/1:12,0:12:23.86:181,24,0	./.
chr10	79523683	.	TA	T	314.97	PASS	AB=0.536;AC=1;AF=0.018;AN=56;BaseQRankSum=3.844;DP=626;FS=4.644;HRun=2;HaplotypeScore=57.3302;InbreedingCoeff=-0.0252;MQ=56.03;MQ0=13;MQRankSum=2.570;QD=21.00;ReadPosRankSum=1.218;VQSLOD=3.6377;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.26:0,90,1304	0/0:5,0:5:15.02:0,15,201	0/0:19,0:1:3.01:0,3,33	0/0:23,0:7:15.05:0,15,211	0/0:17,0:17:51.17:0,51,764	0/0:37,0:36:99:0,111,1641	0/0:29,0:28:84.28:0,84,1239	0/0:33,0:33:99:0,99,1460	0/0:15,0:15:45.15:0,45,674	0/0:27,0:27:81.27:0,81,1214	0/0:10,0:10:30.07:0,30,427	0/0:20,0:20:60.19:0,60,876	0/0:24,0:24:69.23:0,69,1033	0/0:18,0:18:51.17:0,51,764	0/0:31,0:30:93.22:0,93,1347	0/0:26,0:26:78.26:0,78,1169	0/0:39,0:39:99:0,111,1638	0/0:33,0:33:99:0,99,1425	0/0:20,0:14:42.10:0,42,604	0/0:9,0:9:27.09:0,27,397	0/0:29,0:29:87.29:0,87,1304	0/0:25,0:25:75.24:0,75,1092	0/0:18,0:18:54.17:0,54,789	0/0:23,0:23:69.23:0,69,1034	0/1:2,13:15:48.36:389,0,48	0/0:19,0:19:57.19:0,57,854	0/0:21,0:20:60.20:0,60,896	0/0:8,0:8:24.08:0,24,359
chr10	79529612	.	GGACGTTTACT	G	9417.35	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=11.234;DP=453;FS=7.983;HRun=0;HaplotypeScore=160.6288;InbreedingCoeff=0.9306;MQ=70.33;MQ0=0;MQRankSum=-12.447;QD=53.81;ReadPosRankSum=-0.949;VQSLOD=4.1079;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,5765	1/1:0,9:9:24.08:759,24,0	0/0:24,0:24:64.39:0,64,2452	0/0:25,0:24:69.24:0,69,2979	1/1:0,18:18:6.64:38,7,0	0/0:16,0:15:39.13:0,39,2073	0/0:29,0:29:87.28:0,87,4375	1/1:2,11:12:29.97:686,30,0	0/0:17,0:17:45.14:0,45,2200	1/1:4,14:17:36.12:1200,36,0	1/1:0,12:12:9.46:221,9,0	0/0:11,0:11:33.09:0,33,1542	0/0:22,0:22:57.20:0,57,2878	0/0:15,0:15:39.13:0,39,2079	1/1:3,10:13:30.10:991,30,0	1/1:1,10:11:25.63:803,26,0	0/0:23,0:23:66.18:0,66,3137	1/1:0,8:8:18.06:540,18,0	1/1:0,8:8:24.06:722,24,0	1/1:1,15:16:21.03:612,21,0	1/1:0,8:8:6.02:200,6,0	0/0:16,0:16:42.14:0,42,2159	0/0:11,0:11:30.10:0,30,1484	0/0:29,0:29:87.26:0,87,4135	1/1:1,11:12:21.07:700,21,0	1/1:1,19:20:53.31:1545,53,0	1/1:1,6:7:9.03:300,9,0	1/1:0,2:2:3.01:100,3,0
chr10	79530425	.	CCTT	C	2301.16	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.488;DP=300;FS=3.423;HRun=0;HaplotypeScore=54.2919;InbreedingCoeff=0.9161;MQ=80.54;MQ0=3;MQRankSum=-9.025;QD=34.35;ReadPosRankSum=1.479;VQSLOD=3.8739;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:20:39.09:632,39,0	0/0:7,0:7:21.07:0,21,428	0/0:20,0:15:39.01:0,39,550	0/0:25,0:16:35.57:0,36,582	0/0:7,0:7:21.04:0,21,396	0/0:7,0:7:21.07:0,21,482	0/0:12,0:12:33.11:0,33,726	0/0:17,0:17:48.15:0,48,1021	1/1:0,9:9:24.08:408,24,0	0/0:10,0:10:27.09:0,27,552	0/0:4,0:4:12.04:0,12,263	1/1:1,13:13:36.11:573,36,0	1/1:4,10:14:30.10:506,30,0	1/1:1,7:8:21.07:355,21,0	0/0:13,0:13:36.09:0,36,768	0/0:11,0:11:33.10:0,33,703	0/0:5,0:5:15.05:0,15,332	0/0:2,0:2:6.02:0,6,138	0/0:8,0:7:21.06:0,21,390	0/0:5,0:5:15.04:0,15,291	0/0:20,0:20:51.16:0,51,1104	0/0:8,0:8:24.08:0,24,539	0/0:11,0:11:33.11:0,33,743	0/0:16,0:16:48.16:0,48,1065	0/0:7,0:7:18.05:0,18,372	0/0:8,0:8:24.08:0,24,510	0/0:9,0:9:27.09:0,27,599	0/0:1,0:1:3.01:0,3,69
chr10	79530448	.	TCCCTCC	T	1510.89	PASS	AB=0.946;AC=11;AF=0.196;AN=56;BaseQRankSum=6.232;DP=270;FS=19.346;HRun=0;HaplotypeScore=68.0423;InbreedingCoeff=0.6611;MQ=80.14;MQ0=5;MQRankSum=-6.283;QD=17.37;ReadPosRankSum=2.237;VQSLOD=1.4050;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,9:16:24.08:448,24,0	0/0:2,0:2:6.02:0,6,203	0/0:31,0:12:18.01:0,18,270	0/1:32,0:18:14.70:15,0,180	0/0:10,0:10:18.06:0,18,497	0/0:4,0:4:9.03:0,9,253	0/0:10,0:10:15.05:0,15,397	0/0:15,0:14:27.09:0,27,803	1/1:7,2:9:9.03:195,9,0	0/0:8,0:8:15.05:0,15,388	0/0:5,0:5:6.02:0,6,178	1/1:2,4:6:15.05:325,15,0	1/1:6,4:10:12.04:260,12,0	1/1:6,5:11:21.07:434,21,0	0/0:11,0:11:29.77:0,30,614	0/0:9,0:9:27.08:0,27,711	0/0:2,0:2:3.01:0,3,73	0/0:4,0:4:9.03:0,9,270	0/0:5,0:4:6.01:0,6,104	0/0:4,0:5:6.02:0,6,203	0/0:14,0:14:24.08:0,24,635	0/0:8,0:8:18.06:0,18,517	0/0:8,0:8:12.04:0,12,300	0/0:13,0:13:24.08:0,24,702	0/0:5,0:5:6.02:0,6,175	0/0:5,0:5:9.03:0,9,254	0/0:8,0:8:18.06:0,18,557	0/0:1,0:1:3.01:0,3,101
chr10	79530548	.	TCACACACACA	T	877.50	PASS	AB=0.895;AC=20;AF=0.435;AN=46;BaseQRankSum=3.952;DP=372;FS=11.964;HRun=0;HaplotypeScore=146.2089;InbreedingCoeff=0.5258;MQ=40.84;MQ0=19;MQRankSum=-0.503;QD=5.19;ReadPosRankSum=-3.799;VQSLOD=0.5376;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,1:15:5.76:179,6,0	./.	./.	./.	1/1:14,0:15:9.22:40,9,0	0/0:13,0:13:20.59:0,21,921	0/0:22,0:22:30.10:0,30,1165	0/1:10,0:10:7.06:7,0,74	1/1:7,3:7:3.48:87,3,0	0/0:19,0:17:16.05:0,16,222	1/1:15,0:15:5.83:24,6,0	./.	1/1:4,8:11:15.05:424,15,0	0/1:7,1:11:11.12:130,0,11	1/1:15,0:17:13.03:65,13,0	1/1:18,0:19:8.02:34,8,0	0/0:21,0:21:36.12:0,36,1330	0/1:12,0:13:21.54:22,0,137	0/0:6,0:5:8.86:0,9,99	0/0:7,0:7:0.47:0,0,1	1/1:8,0:7:5.42:24,5,0	0/0:24,0:23:24.03:0,24,858	0/0:13,0:12:15.05:0,15,604	0/0:27,0:25:39.91:0,40,1331	0/0:19,0:18:18.98:0,19,847	0/0:13,0:14:19.94:0,20,238	0/1:14,0:10:7.30:7,0,10	./.
chr10	79531434	.	A	AT	7318.17	PASS	AB=0.863;AC=37;AF=0.661;AN=56;BaseQRankSum=-6.683;DP=719;FS=3.474;HRun=12;HaplotypeScore=92.3319;InbreedingCoeff=0.7685;MQ=73.45;MQ0=0;MQRankSum=-0.328;QD=13.68;ReadPosRankSum=-0.025;VQSLOD=5.0595;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:42:99:544,104,0	1/1:6,8:15:23.87:215,24,0	0/1:23,0:22:6.58:7,0,100	0/1:16,0:15:21.23:21,0,49	1/1:12,29:41:40.13:675,40,0	0/0:20,0:20:47.71:0,48,350	0/0:22,1:23:15.53:0,16,277	1/1:13,20:34:57.38:533,57,0	0/0:24,0:24:56.65:0,57,415	1/1:12,21:34:41.37:605,41,0	1/1:6,21:27:35.05:481,35,0	1/1:26,0:26:9.04:171,9,0	1/1:32,0:32:37.71:263,38,0	1/1:17,0:17:18.13:165,18,0	1/1:9,25:34:22.30:540,22,0	1/1:8,21:28:13.85:427,14,0	0/0:32,0:32:68.39:0,68,528	1/1:2,13:15:33.05:321,33,0	1/1:4,15:20:28.63:416,29,0	1/1:9,28:38:12.19:564,12,0	1/1:5,19:24:23.16:386,23,0	0/0:21,1:22:21.43:0,21,317	0/0:18,0:19:43.76:0,44,308	0/0:19,0:18:22.70:0,23,284	0/0:25,0:25:60.71:0,61,439	1/1:12,22:35:36.63:481,37,0	1/1:4,17:20:42.91:400,43,0	0/1:3,7:10:6.88:102,0,7
chr10	79531446	.	T	TA	4015.41	PASS	AB=0.995;AC=26;AF=0.464;AN=56;BaseQRankSum=6.080;DP=698;FS=5.951;HRun=2;HaplotypeScore=93.8078;InbreedingCoeff=0.1468;MQ=71.33;MQ0=0;MQRankSum=-1.682;QD=8.26;ReadPosRankSum=7.803;VQSLOD=0.8651;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,40:47:99:1472,117,0	1/1:10,0:11:0.54:33,1,0	0/0:22,0:20:22.90:0,23,361	0/1:14,0:13:2.55:3,0,167	0/1:41,0:41:31.55:32,0,250	0/0:18,0:18:54.13:0,54,628	0/0:17,0:17:45.45:0,45,537	0/0:32,0:32:0.36:0,0,235	1/1:22,0:22:21.88:112,22,0	0/1:33,0:33:7.85:8,0,276	0/1:27,0:27:7.08:7,0,144	1/1:4,16:20:53.60:651,54,0	1/1:3,28:31:60.67:774,61,0	1/1:2,24:26:34.12:458,34,0	0/1:30,0:30:31.82:32,0,85	0/1:25,0:24:24.04:29,0,24	0/0:32,0:32:81.15:0,81,927	0/1:16,0:16:24.14:24,0,46	0/1:20,0:20:5.30:5,0,89	0/1:36,0:36:21.15:21,0,231	0/1:21,0:21:24.57:25,0,37	0/0:23,0:23:57.47:0,57,676	0/0:19,0:19:48.04:0,48,534	0/0:18,0:17:45.06:0,45,511	1/1:30,0:30:54.93:314,55,0	0/0:30,0:30:9.87:0,10,261	0/1:26,0:25:14.36:14,0,132	0/1:9,0:9:3.40:3,0,51
chr10	79532023	.	ATGAT	A	10885.75	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=14.698;DP=611;FS=4.363;HRun=0;HaplotypeScore=125.9800;InbreedingCoeff=0.9181;MQ=59.69;MQ0=6;MQRankSum=-8.750;QD=25.43;ReadPosRankSum=2.491;VQSLOD=4.7549;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:24:14.23:119,14,0	1/1:7,0:7:18.06:256,18,0	0/0:34,0:30:39.13:0,39,848	0/0:13,0:11:18.06:0,18,390	1/1:25,0:25:48.94:542,49,0	0/0:30,0:30:63.22:0,63,1501	0/0:19,0:19:33.10:0,33,733	1/1:28,0:28:26.92:283,27,0	1/1:20,0:20:60.20:807,60,0	1/1:25,0:25:48.22:837,48,0	1/1:12,0:12:27.04:353,27,0	1/1:11,17:28:54.18:865,54,0	1/1:7,22:29:57.19:913,57,0	1/1:13,15:28:36.12:576,36,0	1/1:21,0:21:57.19:770,57,0	1/1:22,0:21:57.19:782,57,0	1/1:7,23:29:54.18:865,54,0	0/1:9,0:9:2.94:178,0,3	1/1:16,0:13:15.05:194,15,0	1/1:20,0:20:48.16:661,48,0	1/1:15,0:15:17.99:222,18,0	0/0:30,0:30:63.22:0,63,1466	0/0:23,0:23:45.15:0,45,1017	0/0:33,0:33:69.22:0,69,1568	1/1:12,0:25:30.03:279,30,0	1/1:19,0:19:30.16:607,30,0	1/1:21,0:20:48.16:655,48,0	1/1:3,0:3:9.03:121,9,0
chr10	79532050	.	ATTGATTGT	A	2161.73	PASS	AB=0.958;AC=10;AF=0.179;AN=56;BaseQRankSum=-0.934;DP=684;FS=1.955;HRun=0;HaplotypeScore=213.5086;InbreedingCoeff=-0.2182;MQ=63.79;MQ0=8;MQRankSum=3.431;QD=9.40;ReadPosRankSum=-5.382;VQSLOD=1.4645;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:22:99:227,0,151	0/1:12,0:12:12.91:13,0,44	0/0:35,0:26:71.36:0,71,2148	0/0:21,0:20:60.04:0,60,1470	0/1:9,23:32:19.91:801,0,20	0/0:23,0:23:69.22:0,69,2937	0/0:21,0:21:56.96:0,57,1641	0/1:31,0:31:99:330,0,280	0/0:25,0:25:53.68:0,54,228	0/1:33,0:33:99:146,0,199	0/1:16,0:16:34.19:34,0,89	0/0:26,0:26:75.16:0,75,889	0/0:32,0:32:84.14:0,84,953	0/0:23,0:23:60:0,60,649	0/0:32,0:32:53.20:0,53,222	0/0:25,0:24:50.03:0,50,203	0/0:32,0:31:78.17:0,78,974	0/0:11,0:11:16.60:0,17,120	0/1:14,0:11:52.15:52,0,114	0/1:25,0:25:49.03:49,0,131	0/0:19,0:19:22.97:0,23,124	0/0:27,0:27:81.22:0,81,3066	0/0:25,0:25:75.08:0,75,2238	0/0:35,0:35:99:0,102,3500	0/1:18,0:18:79.85:541,0,80	0/1:26,0:26:99:113,0,163	0/0:36,0:35:32.85:0,33,169	0/0:6,0:6:7.87:0,8,31
chr10	79532054	.	ATTGT	A	14167.17	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=16.694;DP=693;FS=0.307;HRun=0;HaplotypeScore=125.3193;InbreedingCoeff=0.5769;MQ=66.81;MQ0=6;MQRankSum=-7.381;QD=29.64;ReadPosRankSum=6.645;VQSLOD=4.4069;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:2.23:0,2,180	1/1:0,12:12:23.93:403,24,0	0/0:33,0:25:68.26:0,68,1318	0/0:22,0:21:63.02:0,63,1056	1/1:23,9:32:90.66:1046,91,0	0/0:25,0:25:72.21:0,72,1835	0/0:25,0:25:68.93:0,69,1137	1/1:0,30:30:87.06:1024,87,0	1/1:0,25:25:60.21:1217,60,0	1/1:0,32:32:93.22:1599,93,0	1/1:0,17:17:44.76:635,45,0	0/1:28,0:28:99:345,0,137	0/1:34,0:34:99:351,0,179	0/1:24,0:24:99:223,0,148	1/1:0,35:35:57.20:1173,57,0	1/1:0,26:25:57.20:1165,57,0	0/1:32,0:31:99:366,0,120	1/1:0,13:13:15.05:301,15,0	1/1:2,9:9:27.03:407,27,0	1/1:0,24:24:71.81:1134,72,0	1/1:0,17:17:21:364,21,0	0/0:29,0:29:87.17:0,87,1930	0/0:23,0:23:69.06:0,69,1326	0/0:33,0:33:96.22:0,96,2129	0/1:19,0:19:57.43:57,0,106	1/1:0,24:24:69.15:1169,69,0	1/1:0,37:37:51.04:1002,51,0	1/1:0,6:6:9.03:186,9,0
chr10	79532838	.	T	TG	15991.87	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=17.725;DP=626;FS=0.627;HRun=0;HaplotypeScore=104.7032;InbreedingCoeff=0.9996;MQ=97.06;MQ0=1;MQRankSum=-4.982;QD=41.00;ReadPosRankSum=2.281;VQSLOD=4.9659;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:27.09:405,27,0	1/1:0,13:13:33.11:496,33,0	0/0:36,0:36:99:0,102,1386	0/0:25,0:25:69.18:0,69,915	1/1:2,32:34:87.29:1309,87,0	0/0:28,0:28:84.28:0,84,1175	0/0:22,0:22:66.19:0,66,889	1/1:3,24:26:66.22:1002,66,0	1/1:0,19:19:57.19:853,57,0	1/1:0,20:20:60.18:865,60,0	1/1:0,31:31:90.30:1345,90,0	0/0:16,0:16:48.16:0,48,671	0/0:17,0:17:51.17:0,51,713	0/0:19,0:19:57.19:0,57,797	1/1:0,26:26:78.26:1156,78,0	1/1:0,19:19:47.94:712,48,0	0/0:20,0:20:54.18:0,54,755	1/1:0,11:11:33.11:497,33,0	1/1:0,20:18:54.16:795,54,0	1/1:2,33:35:90.24:1323,90,0	1/1:0,28:28:78.26:1176,78,0	0/0:18,0:18:54.18:0,54,755	0/0:25,0:25:75.25:0,75,1049	0/0:10,0:10:30.10:0,30,419	1/1:0,26:26:69.23:1036,69,0	1/1:0,35:35:99:1533,102,0	1/1:0,26:26:72.24:1087,72,0	1/1:0,10:9:27.09:401,27,0
chr10	79533737	.	CT	C	6690.44	PASS	AB=0.889;AC=31;AF=0.554;AN=56;BaseQRankSum=8.109;DP=550;FS=6.530;HRun=10;HaplotypeScore=56.9098;InbreedingCoeff=0.8830;MQ=67.25;MQ0=0;MQRankSum=-2.437;QD=20.15;ReadPosRankSum=0.053;VQSLOD=5.6883;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,1:22:37.12:0,37,637	1/1:1,8:9:23.99:208,24,0	0/1:7,1:8:19.56:20,0,60	0/0:6,0:6:10.97:0,11,87	1/1:4,34:39:97.85:822,98,0	0/0:28,0:28:81.20:0,81,883	0/0:15,0:15:39.09:0,39,423	1/1:6,20:26:59.94:515,60,0	1/1:2,11:13:2.61:184,3,0	1/1:3,31:35:94.90:791,95,0	1/1:1,26:27:74.81:633,75,0	0/0:14,0:14:39.10:0,39,424	0/0:23,0:23:63.14:0,63,674	0/0:14,0:14:39.10:0,39,423	1/1:4,22:26:56.96:495,57,0	1/1:4,15:19:32.99:287,33,0	0/0:14,0:14:42.07:0,42,451	1/1:2,9:11:26.98:234,27,0	1/1:4,11:15:32.98:287,33,0	1/1:2,29:31:80.97:703,81,0	1/1:4,8:13:26.03:214,26,0	0/0:20,0:20:51.08:0,51,538	0/0:22,2:24:8.05:0,8,545	0/0:13,0:13:36.08:0,36,388	0/0:24,1:25:43:0,43,685	1/1:3,18:21:53.96:465,54,0	1/1:1,33:34:83.88:729,84,0	1/1:0,5:5:12:104,12,0
chr10	79534216	.	T	TA	5267.73	PASS	AB=0.585;AC=26;AF=0.464;AN=56;BaseQRankSum=-3.912;DP=493;FS=2.831;HRun=10;HaplotypeScore=71.9807;InbreedingCoeff=0.7274;MQ=76.78;MQ0=0;MQRankSum=-1.167;QD=20.18;ReadPosRankSum=-1.442;VQSLOD=5.3374;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:2,9:11:22.21:190,0,22	1/1:1,5:6:15.04:160,15,0	0/0:17,0:18:34.97:0,35,274	0/0:15,0:15:19.01:0,19,148	1/1:5,21:27:66:684,66,0	0/0:32,0:32:62.93:0,63,592	0/0:16,0:16:26.91:0,27,219	1/1:11,27:37:12.13:723,12,0	0/0:13,0:13:32.95:0,33,271	1/1:6,17:23:23.45:446,23,0	1/1:6,8:14:2.41:220,2,0	0/0:13,0:13:32.96:0,33,271	0/0:21,0:21:35.72:0,36,289	0/0:10,0:10:17.97:0,18,148	0/1:2,8:10:0.58:200,0,1	1/1:3,14:17:17.47:391,17,0	0/0:22,0:22:41.90:0,42,341	0/1:4,6:11:0.71:182,0,1	0/1:9,14:22:25.53:367,0,26	1/1:2,16:18:42.06:429,42,0	1/1:2,5:7:14.95:145,15,0	0/0:15,0:15:26.93:0,27,218	0/0:21,0:22:40.58:0,41,296	0/0:16,0:16:47.92:0,48,391	0/0:16,1:17:44.88:0,45,362	1/1:4,13:17:11.45:327,11,0	1/1:6,19:25:8.33:496,8,0	1/1:3,10:14:30.04:309,30,0
chr10	79534246	.	TTCTCTCTCTCTCTC	T	571.86	PASS	AB=0.750;AC=5;AF=0.096;AN=52;BaseQRankSum=1.315;DP=486;FS=0.000;HRun=0;HaplotypeScore=193.4163;InbreedingCoeff=0.4384;MQ=57.64;MQ0=13;MQRankSum=-2.298;QD=13.30;ReadPosRankSum=1.115;VQSLOD=2.5029;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:3.07:0,3,24	0/0:12,0:12:6.87:0,7,194	./.	./.	0/0:23,0:23:6.02:0,6,133	0/0:21,0:20:8.97:0,9,71	0/0:11,0:11:12.01:0,12,244	0/0:39,0:38:26.54:0,27,150	0/0:10,0:9:8.91:0,9,66	0/0:22,0:23:27.08:0,27,1253	0/0:16,0:16:12.26:0,12,125	0/1:10,0:14:11.60:127,0,12	1/1:10,7:17:4.74:207,5,0	1/1:4,7:11:9.03:348,9,0	0/0:13,0:13:9.28:0,9,179	0/0:16,0:16:19.23:0,19,280	0/0:20,0:19:21.44:0,21,605	0/0:8,0:8:9:0,9,327	0/0:15,0:15:18.04:0,18,542	0/0:32,0:32:20.92:0,21,681	0/0:12,0:11:3.48:0,3,150	0/0:14,0:14:21.02:0,21,379	0/0:15,0:15:12.34:0,12,143	0/0:21,0:22:21.03:0,21,891	0/0:10,0:9:8.89:0,9,165	0/0:18,0:19:44.16:0,44,1768	0/0:15,0:15:11.99:0,12,485	0/0:14,0:14:9.03:0,9,417
chr10	79534296	.	CTT	C	3530.20	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=7.920;DP=529;FS=2.265;HRun=3;HaplotypeScore=140.7295;InbreedingCoeff=0.0802;MQ=46.51;MQ0=20;MQRankSum=-0.385;QD=7.99;ReadPosRankSum=0.364;VQSLOD=0.3269;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:14:24.06:160,24,0	1/1:11,0:11:2.48:86,2,0	0/1:17,0:9:62.77:63,0,105	0/1:19,0:6:13.83:37,0,14	1/1:24,0:23:46.47:361,46,0	0/0:22,0:20:42.31:0,42,343	0/0:18,0:18:37.32:0,37,320	1/1:23,0:21:22.60:288,23,0	1/1:2,9:9:3:26,3,0	0/1:24,0:20:99:174,0,117	1/1:26,0:26:55.58:416,56,0	0/0:14,0:13:22.75:0,23,184	0/1:17,0:17:1.66:2,0,161	0/0:22,0:22:21.61:0,22,327	1/1:19,0:19:46.81:324,47,0	1/1:18,0:18:40.05:330,40,0	0/1:23,0:22:14.69:15,0,325	0/1:9,0:9:21.75:99,0,22	0/1:21,0:20:38.96:227,0,39	1/1:29,0:28:16.42:255,16,0	1/1:15,0:13:6.44:64,6,0	0/1:20,0:20:61.77:62,0,183	0/1:20,0:19:37.55:38,0,205	0/1:21,0:20:7.97:8,0,318	0/1:11,0:10:29.52:30,0,109	0/1:22,0:21:65.08:158,0,65	1/1:26,0:26:4.54:308,5,0	0/0:11,0:11:19.66:0,20,119
chr10	79534781	.	T	TG	826.48	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-0.729;DP=662;FS=3.226;HRun=0;HaplotypeScore=97.2469;InbreedingCoeff=0.6341;MQ=72.67;MQ0=0;MQRankSum=1.975;QD=16.21;ReadPosRankSum=-1.494;VQSLOD=4.8224;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:76.12:919,76,0	0/0:12,0:12:32.87:0,33,184	0/0:13,0:13:7.75:0,8,278	0/0:16,0:15:20.98:0,21,343	0/0:26,0:26:66.61:0,67,432	0/0:21,0:21:60.17:0,60,777	0/0:21,0:21:63.19:0,63,848	0/0:35,0:35:84.67:0,85,451	0/0:33,0:33:80.25:0,80,454	0/0:31,0:31:64.10:0,64,385	0/0:30,0:30:69.90:0,70,442	0/0:22,0:22:63.17:0,63,803	0/0:35,0:35:99:0,105,1420	0/0:21,0:21:63.21:0,63,872	0/0:23,0:23:32.80:0,33,274	0/0:28,0:28:74.55:0,75,412	0/0:18,0:18:51.14:0,51,692	0/0:11,0:11:26.58:0,27,150	0/1:18,0:18:9.27:9,0,144	0/0:27,0:27:76.83:0,77,484	0/0:26,0:26:73.31:0,73,401	0/0:31,0:31:93.28:0,93,1245	0/0:27,0:27:72.24:0,72,1005	0/0:30,0:30:90.26:0,90,1229	0/0:21,0:21:63.11:0,63,775	0/0:26,0:26:69.90:0,70,398	0/0:20,0:20:49.09:0,49,279	0/0:7,0:7:20.53:0,21,125
chr10	79534968	.	AACAC	A	11642.19	PASS	AB=0.754;AC=28;AF=0.500;AN=56;BaseQRankSum=4.514;DP=917;FS=4.809;HRun=0;HaplotypeScore=200.4238;InbreedingCoeff=0.5527;MQ=61.33;MQ0=4;MQRankSum=-1.762;QD=19.94;ReadPosRankSum=4.033;VQSLOD=4.4966;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,28:52:60.12:987,60,0	1/1:1,7:9:27.09:422,27,0	0/0:35,0:21:21.07:0,21,458	0/0:45,0:35:27.09:0,27,545	1/1:18,21:42:31.61:744,32,0	0/0:16,0:19:47.37:0,47,969	0/0:25,0:27:65.70:0,66,1462	0/1:35,11:45:99:629,0,473	1/1:17,10:27:51.10:751,51,0	0/1:20,20:41:99:998,0,154	1/1:11,13:24:35.32:510,35,0	0/0:32,0:34:77.47:0,77,1717	0/0:24,0:27:56.30:0,56,1013	0/0:31,1:37:33.38:0,33,1641	1/1:11,26:37:36.81:778,37,0	1/1:17,20:37:16.18:813,16,0	0/1:25,2:27:42.64:43,0,1061	0/1:9,15:26:46.47:621,0,46	0/1:19,3:18:99:169,0,192	1/1:12,21:35:50.92:829,51,0	1/1:30,43:74:77.94:1390,78,0	0/0:27,0:29:68.71:0,69,1532	0/0:13,0:15:35.56:0,36,707	0/0:44,0:47:95.50:0,95,2060	0/0:18,0:17:11.71:0,12,83	0/1:16,20:34:99:693,0,161	1/1:15,17:33:7.14:724,7,0	1/1:3,11:14:32.22:541,32,0
chr10	79535126	.	T	TCACA	8638.39	PASS	AB=0.904;AC=34;AF=0.607;AN=56;BaseQRankSum=10.832;DP=1050;FS=22.498;HRun=0;HaplotypeScore=303.7214;InbreedingCoeff=0.6401;MQ=53.52;MQ0=12;MQRankSum=-4.069;QD=10.60;ReadPosRankSum=-5.292;VQSLOD=2.5234;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:20:3.46:24,3,0	1/1:15,3:19:24.32:264,24,0	0/1:51,0:25:17.76:18,0,194	0/1:47,0:18:25.54:26,0,97	1/1:46,7:54:36.24:551,36,0	0/0:21,0:23:38.52:0,39,573	0/0:19,0:19:29.15:0,29,512	1/1:83,0:82:49.07:437,49,0	1/1:31,2:35:2.51:245,3,0	1/1:53,7:60:59.70:1212,60,0	1/1:28,6:35:26.41:503,26,0	0/0:28,0:28:69.18:0,69,1045	0/0:25,0:25:63.15:0,63,963	0/0:31,0:32:62.59:0,63,1102	1/1:51,10:62:41.30:813,41,0	1/1:35,9:46:30.12:739,30,0	0/0:24,0:26:2.93:0,3,743	0/1:19,9:28:1.04:807,0,1	1/1:33,0:26:17.28:190,17,0	1/1:36,8:45:33.04:548,33,0	1/1:51,0:52:24.19:216,24,0	0/0:30,0:30:43.27:0,43,957	0/0:20,0:21:39.13:0,39,610	0/0:28,0:30:6.59:0,7,760	1/1:6,0:25:14.75:264,15,0	1/1:46,5:52:38.41:887,38,0	0/1:36,7:43:48.27:607,0,48	1/1:16,1:17:29.84:287,30,0
chr10	79535506	.	TATA	T	10032.51	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=16.913;DP=493;FS=28.462;HRun=0;HaplotypeScore=105.8061;InbreedingCoeff=0.9898;MQ=69.33;MQ0=0;MQRankSum=-10.706;QD=40.13;ReadPosRankSum=0.831;VQSLOD=3.1276;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:45.15:0,45,1021	1/1:0,11:11:33.11:562,33,0	0/0:15,0:14:38.16:0,38,746	0/0:10,0:9:21.13:0,21,393	1/1:2,23:24:63.21:1052,63,0	0/0:26,0:26:78.27:0,78,1799	0/0:13,0:13:39.13:0,39,858	1/1:5,25:30:69.24:1175,69,0	1/1:2,11:13:27.09:460,27,0	1/1:1,20:21:57.19:964,57,0	1/1:0,18:17:48.16:815,48,0	0/0:19,0:19:54.19:0,54,1245	0/0:24,0:24:72.25:0,72,1653	0/0:13,0:13:39.13:0,39,899	1/1:5,12:17:27.09:460,27,0	1/1:0,16:16:30.10:511,30,0	0/0:32,0:32:93.32:0,93,2117	1/1:0,7:7:21.07:358,21,0	1/1:1,11:12:30.10:511,30,0	1/1:2,25:26:69.24:1176,69,0	1/1:1,7:8:21.07:358,21,0	0/0:24,0:24:72.25:0,72,1641	0/0:20,0:20:57.20:0,57,1314	0/0:11,0:11:33.11:0,33,761	0/0:21,0:21:63.22:0,63,1434	1/1:5,20:25:51.17:870,51,0	1/1:3,13:16:36.12:607,36,0	1/1:1,3:4:9.03:153,9,0
chr10	79536304	.	GAGAATAA	G	1395.19	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.254;DP=440;FS=0.835;HRun=0;HaplotypeScore=109.8835;InbreedingCoeff=0.9829;MQ=86.03;MQ0=0;MQRankSum=-5.792;QD=55.81;ReadPosRankSum=-1.001;VQSLOD=3.5428;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,19:25:60.14:1490,60,0	0/0:6,0:6:18.06:0,18,727	0/0:27,0:27:81.28:0,81,2961	0/0:24,0:24:36.34:0,36,1722	0/0:13,0:13:30.10:0,30,1212	0/0:17,0:17:48.15:0,48,1842	0/0:14,0:14:42.14:0,42,1697	0/0:27,0:27:81.28:0,81,3017	0/0:11,0:11:30.10:0,30,1213	0/0:13,0:13:39.13:0,39,1532	0/0:12,0:12:36.12:0,36,1369	0/0:18,0:18:48.16:0,48,1814	0/0:10,0:10:27.09:0,27,1090	0/0:17,0:17:51.18:0,51,1913	0/0:18,0:18:51.18:0,51,2032	0/0:16,0:16:39.13:0,39,1530	0/0:17,0:17:51.18:0,51,1958	0/0:13,0:13:30.10:0,30,1095	0/0:14,0:14:39.12:0,39,1340	0/0:12,0:12:36.12:0,36,1397	0/0:15,0:15:45.14:0,45,1663	0/0:12,0:12:36.12:0,36,1352	0/0:8,0:8:24.08:0,24,855	0/0:20,0:20:57.20:0,57,2304	0/0:16,0:16:45.15:0,45,1664	0/0:17,0:17:48.16:0,48,1909	0/0:21,0:20:54.19:0,54,2137	0/0:7,0:7:21.07:0,21,839
chr10	79536366	.	GCACCCCCCCCC	G	2146.88	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=5.304;DP=332;FS=0.842;HRun=0;HaplotypeScore=120.0173;InbreedingCoeff=0.5884;MQ=79.62;MQ0=1;MQRankSum=-6.731;QD=42.94;ReadPosRankSum=-0.496;VQSLOD=3.3111;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:33:69.15:2241,69,0	0/0:1,0:1:3.01:0,3,45	0/0:15,0:12:30.06:0,30,856	0/1:17,0:16:1.24:1,0,750	0/0:11,0:12:30.08:0,30,841	0/0:9,0:10:21.04:0,21,544	0/0:15,0:15:45.14:0,45,1538	0/0:7,0:7:21.06:0,21,556	0/0:7,0:8:24.08:0,24,1008	0/0:3,0:5:15.05:0,15,465	0/0:8,0:9:24.08:0,24,584	0/0:11,0:11:24.08:0,24,784	0/0:10,0:11:27.09:0,27,824	0/0:9,0:10:24.08:0,24,870	0/0:19,0:20:54.17:0,54,1789	0/0:6,0:7:18.06:0,18,587	0/0:13,0:16:30.10:0,30,1193	0/0:11,0:15:36.12:0,36,1162	0/0:9,0:9:27.08:0,27,826	0/0:12,0:13:39.12:0,39,1260	0/0:17,0:20:45.63:0,46,1289	0/0:7,0:7:12.03:0,12,320	0/0:10,0:10:21.07:0,21,854	0/0:9,0:12:32.64:0,33,1024	0/0:15,0:15:42.14:0,42,830	0/0:12,0:12:33.11:0,33,1111	0/0:9,0:9:20.21:0,20,605	0/0:0,0:2:6.02:0,6,178
chr10	79536368	.	ACCC	A	3093.11	PASS	AB=0.740;AC=41;AF=0.759;AN=54;BaseQRankSum=0.568;DP=331;FS=9.502;HRun=13;HaplotypeScore=67.8650;InbreedingCoeff=0.3362;MQ=78.40;MQ0=1;MQRankSum=-3.909;QD=10.85;ReadPosRankSum=2.537;VQSLOD=-0.0676;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:59.32:408,59,0	./.	0/0:11,0:10:14.81:0,15,120	0/0:18,0:16:12.12:0,12,150	1/1:4,7:11:18.01:219,18,0	0/0:7,0:8:4.24:0,4,28	0/1:7,3:15:40.95:89,0,41	1/1:6,1:7:2.95:36,3,0	0/1:6,0:8:6.10:6,0,45	1/1:2,2:5:14.98:163,15,0	1/1:6,3:9:5.97:72,6,0	1/1:5,7:12:18.03:218,18,0	1/1:4,6:11:14.92:163,15,0	1/1:6,5:11:8.94:110,9,0	0/1:11,8:20:1.89:231,0,2	1/1:4,3:7:8.98:108,9,0	0/1:7,1:16:63.04:82,0,63	1/1:6,8:15:26.96:308,27,0	1/1:5,1:9:7.17:69,7,0	1/1:8,6:14:14.92:182,15,0	1/1:13,9:22:14.90:181,15,0	0/0:3,2:6:3.62:0,4,11	1/1:11,0:11:2.87:35,3,0	0/1:10,0:11:22.63:23,0,65	1/1:3,0:15:35.29:215,35,0	1/1:5,6:11:14.94:177,15,0	1/1:5,4:9:8.70:90,9,0	1/1:2,0:2:6.01:65,6,0
chr10	79536379	.	CCCA	C	1062.86	PASS	AB=0.987;AC=23;AF=0.411;AN=56;BaseQRankSum=7.976;DP=298;FS=7.952;HRun=0;HaplotypeScore=68.3339;InbreedingCoeff=-0.2461;MQ=74.60;MQ0=1;MQRankSum=-6.660;QD=4.54;ReadPosRankSum=7.772;VQSLOD=-0.4358;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:59.45:410,59,0	0/0:1,0:1:2.99:0,3,24	0/0:9,0:8:9.01:0,9,132	0/0:14,0:12:12.08:0,12,161	1/1:8,0:8:1.96:72,2,0	0/0:8,0:9:17.72:0,18,134	0/1:13,0:13:27.46:27,0,67	0/0:4,0:4:2.01:0,2,73	0/0:6,0:6:9.30:0,9,50	0/1:7,0:7:45.95:53,0,46	0/1:8,0:8:6.11:6,0,82	1/1:8,2:10:1.80:129,2,0	0/1:11,0:11:27.61:66,0,28	0/1:8,0:8:12.39:36,0,12	0/1:15,0:15:60.13:65,0,60	0/1:8,0:8:29.07:29,0,78	0/1:20,0:20:16.44:16,0,139	0/1:15,0:15:36.91:75,0,37	0/0:6,0:6:5.61:0,6,64	0/1:8,0:8:1.93:54,0,2	0/1:19,0:19:28.58:29,0,137	0/0:5,0:5:8.60:0,9,53	0/1:7,1:8:25.22:25,0,99	0/0:10,0:10:0.05:0,0,48	0/1:15,0:15:10.25:10,0,51	0/1:11,1:12:87.50:87,0,93	0/1:12,0:12:10.40:10,0,97	1/1:2,0:2:4.30:17,4,0
chr10	79536501	.	T	TA	1399.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.962;DP=546;FS=10.918;HRun=2;HaplotypeScore=90.3801;InbreedingCoeff=0.8790;MQ=81.74;MQ0=0;MQRankSum=-4.666;QD=36.82;ReadPosRankSum=-0.821;VQSLOD=2.9065;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,37:38:99:1494,105,0	0/0:4,0:4:12.04:0,12,149	0/0:21,0:21:52.03:0,52,606	0/0:13,0:13:33.10:0,33,400	0/0:16,0:16:48.10:0,48,565	0/0:12,0:12:30.08:0,30,359	0/0:17,0:17:51.15:0,51,619	0/0:34,0:34:96.29:0,96,1168	0/0:23,0:23:69.20:0,69,842	0/0:21,0:21:57.17:0,57,698	0/0:13,0:13:33.10:0,33,409	0/0:20,0:20:60.19:0,60,743	0/0:26,0:26:78.24:0,78,958	0/0:20,0:20:60.18:0,60,731	0/0:27,0:27:78.24:0,78,956	0/0:19,0:19:57.18:0,57,707	0/0:31,0:31:87.26:0,87,1065	0/0:14,0:14:36.11:0,36,446	0/0:19,0:19:57.14:0,57,679	0/0:16,0:16:42.13:0,42,520	0/0:19,0:19:57.12:0,57,663	0/0:11,0:11:30.09:0,30,372	0/0:14,0:14:33.10:0,33,408	0/0:24,0:24:69.22:0,69,855	0/0:22,0:21:63.20:0,63,781	0/0:26,0:26:77.95:0,78,925	0/0:22,0:22:66.18:0,66,793	0/0:4,0:4:6.02:0,6,74
chr10	79536880	.	GC	G	314.33	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.558;DP=639;FS=0.000;HRun=3;HaplotypeScore=61.8026;InbreedingCoeff=0.9988;MQ=86.85;MQ0=0;MQRankSum=-2.457;QD=24.18;ReadPosRankSum=1.328;VQSLOD=2.7803;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.16:0,51,716	0/0:10,0:10:30.10:0,30,432	0/0:24,0:24:72.24:0,72,1022	0/0:22,0:21:63.17:0,63,848	0/0:36,0:36:99:0,99,1421	0/0:29,0:29:87.29:0,87,1245	0/0:16,0:16:48.13:0,48,670	0/0:26,0:26:78.23:0,78,1073	0/0:26,0:26:78.25:0,78,1106	0/0:31,0:31:93.30:0,93,1313	0/0:13,0:13:33.11:0,33,474	0/0:21,0:21:63.20:0,63,888	0/0:23,0:23:69.23:0,69,978	0/0:16,0:16:48.14:0,48,672	0/0:22,0:22:60.19:0,60,845	0/0:25,0:25:72.24:0,72,1031	0/0:24,0:25:72.03:0,72,1006	0/0:14,0:14:36.12:0,36,517	0/0:32,0:32:90.28:0,90,1249	0/0:26,0:26:78.26:0,78,1122	0/0:30,0:30:90.29:0,90,1279	0/0:18,0:18:51.17:0,51,734	0/0:21,0:21:63.21:0,63,898	0/0:24,0:24:72.19:0,72,996	1/1:0,13:13:33.10:409,33,0	0/0:35,0:35:99:0,102,1468	0/0:25,0:25:75.23:0,75,1041	0/0:17,0:17:51.14:0,51,697
chr10	79537191	.	C	CAT	181.56	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=5.012;DP=511;FS=1.403;HRun=0;HaplotypeScore=88.1608;InbreedingCoeff=0.7146;MQ=76.04;MQ0=0;MQRankSum=0.088;QD=4.78;ReadPosRankSum=-1.989;VQSLOD=2.5895;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,4:7:9.03:150,9,0	0/0:9,0:9:21.07:0,21,267	0/0:11,0:8:7.14:0,7,52	0/1:20,0:16:8.43:22,0,8	0/0:35,0:35:90.24:0,90,1101	0/0:26,0:25:69.20:0,69,861	0/0:14,0:14:36.11:0,36,457	0/0:46,0:46:93.28:0,93,1157	0/0:16,0:16:45.13:0,45,558	0/0:26,0:26:57.17:0,57,714	0/0:22,0:22:54.14:0,54,658	0/0:16,0:16:30.08:0,30,369	0/0:11,0:11:30.10:0,30,382	0/0:17,0:17:39.12:0,39,496	0/0:22,0:22:51.15:0,51,636	0/0:11,0:11:33.11:0,33,419	0/0:20,0:20:51.15:0,51,634	0/0:11,0:11:24.08:0,24,304	0/0:14,0:14:39.12:0,39,496	0/0:31,0:31:84.24:0,84,1041	0/0:18,0:18:39.12:0,39,494	0/0:10,0:10:27.09:0,27,343	0/0:19,0:19:56.95:0,57,684	0/0:5,0:5:12.04:0,12,152	1/1:6,5:11:9.02:125,9,0	0/0:24,0:24:57.18:0,57,725	0/0:30,0:29:69.15:0,69,828	0/0:9,0:9:27.09:0,27,344
chr10	79537212	.	G	GAT	401.08	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-0.111;DP=546;FS=6.225;HRun=0;HaplotypeScore=85.7170;InbreedingCoeff=0.7804;MQ=73.40;MQ0=2;MQRankSum=0.038;QD=14.32;ReadPosRankSum=-1.926;VQSLOD=2.2869;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:9:12.04:206,12,0	0/0:8,0:8:21.07:0,21,276	0/1:9,0:4:2.64:3,0,34	0/0:24,0:20:5.21:0,5,54	0/0:32,0:32:96.31:0,96,1260	0/0:30,0:30:84.06:0,84,1078	0/0:14,0:14:39.11:0,39,497	0/0:34,0:34:72.18:0,72,898	0/0:23,0:23:69.22:0,69,906	0/0:28,0:28:75.20:0,75,985	0/0:23,0:23:60.20:0,60,788	0/0:12,0:12:36.12:0,36,473	0/0:17,0:17:45.13:0,45,576	0/0:18,0:18:54.17:0,54,703	0/0:27,0:27:78.24:0,78,1010	0/0:12,0:12:26.54:0,27,354	0/0:15,0:15:42.14:0,42,551	0/0:13,0:12:33.11:0,33,432	0/0:18,0:18:54.17:0,54,696	0/0:34,0:34:93.30:0,93,1219	0/0:24,0:24:66.21:0,66,865	0/0:13,0:13:30.08:0,30,380	0/0:22,0:22:63.20:0,63,826	0/0:9,0:9:27.05:0,27,335	1/1:1,9:10:18.06:309,18,0	0/0:21,0:21:57.18:0,57,736	0/0:28,0:28:81.25:0,81,1049	0/0:17,0:17:41.87:0,42,549
chr10	79537934	.	ATCCATTATGTC	A	27132.70	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=19.426;DP=591;FS=12.304;HRun=0;HaplotypeScore=209.0136;InbreedingCoeff=0.9671;MQ=84.77;MQ0=0;MQRankSum=-17.465;QD=93.56;ReadPosRankSum=1.879;VQSLOD=3.9965;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.21:0,60,3377	1/1:0,12:12:30.10:1020,30,0	0/0:22,0:22:63.22:0,63,3187	0/0:24,0:24:72.25:0,72,3541	1/1:0,28:29:60.21:2067,60,0	0/0:29,0:29:87.30:0,87,4978	0/0:18,0:18:54.19:0,54,3171	1/1:0,20:20:60.21:2072,60,0	1/1:0,18:18:45.15:1658,45,0	1/1:0,35:35:99:3577,105,0	1/1:0,22:22:51.18:1838,51,0	0/0:20,0:20:60.21:0,60,3239	0/0:31,0:31:90.31:0,90,5026	0/0:36,0:36:99:0,108,6209	1/1:0,27:27:72.25:2682,72,0	1/1:0,21:21:51.18:1900,51,0	0/0:21,0:21:63.22:0,63,3235	1/1:0,4:4:12.04:447,12,0	1/1:1,10:11:33.11:1215,33,0	1/1:1,17:18:54.19:2007,54,0	1/1:0,5:5:12.04:443,12,0	0/0:30,0:30:90.31:0,90,5152	0/0:31,0:31:93.31:0,93,4849	0/0:19,0:19:57.17:0,57,3015	1/1:0,18:18:51.18:1878,51,0	1/1:0,25:25:72.25:2561,72,0	1/1:0,19:19:45.15:1655,45,0	1/1:0,6:6:3.01:112,3,0
chr10	79538221	.	A	AT	9143.62	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=9.647;DP=440;FS=31.400;HRun=6;HaplotypeScore=61.9493;InbreedingCoeff=0.9851;MQ=74.62;MQ0=0;MQRankSum=-5.594;QD=31.00;ReadPosRankSum=1.116;VQSLOD=2.7932;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:33.07:0,33,336	1/1:0,14:14:36.12:453,36,0	0/0:10,0:10:26.98:0,27,243	0/0:14,0:14:25.97:0,26,252	1/1:4,24:28:72.18:872,72,0	0/0:12,0:12:36.08:0,36,367	0/0:10,0:10:27.04:0,27,268	1/1:10,29:39:87.27:1081,87,0	1/1:1,13:14:33.10:411,33,0	1/1:3,18:21:54.13:661,54,0	1/1:1,24:25:66.17:812,66,0	0/0:6,0:6:15.03:0,15,153	0/0:11,0:11:24.05:0,24,245	0/0:15,0:15:36.08:0,36,367	1/1:0,18:18:51.16:641,51,0	1/1:1,16:17:45.14:566,45,0	0/0:21,0:21:57.13:0,57,580	1/1:1,10:11:32.77:388,33,0	1/1:1,16:17:48.15:603,48,0	1/1:2,19:21:57.14:696,57,0	1/1:1,13:14:27.09:339,27,0	0/0:14,0:14:39.09:0,39,398	0/0:17,0:17:45.10:0,45,459	0/0:3,0:3:8.98:0,9,81	1/1:5,7:12:15.05:189,15,0	1/1:2,20:22:60.19:754,60,0	1/1:1,14:15:36.12:453,36,0	1/1:0,6:7:18.05:226,18,0
chr10	79538343	.	CTATATATATA	C	814.94	PASS	AB=0.850;AC=9;AF=0.265;AN=34;BaseQRankSum=-1.969;DP=261;FS=2.894;HRun=0;HaplotypeScore=126.4659;InbreedingCoeff=0.1914;MQ=50.20;MQ0=5;MQRankSum=-3.671;QD=10.72;ReadPosRankSum=-2.586;VQSLOD=1.9261;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:12.04:0,12,411	./.	./.	0/0:14,0:6:3.01:0,3,52	0/0:18,3:21:0.89:0,1,2	0/0:7,0:7:6.02:0,6,216	./.	1/1:10,2:10:5.98:179,6,0	1/1:12,0:12:2.94:18,3,0	0/1:11,2:13:99:162,0,146	0/0:19,1:20:3.01:0,3,37	./.	1/1:4,0:4:0.47:1,0,0	./.	./.	0/0:8,0:8:9.84:0,10,90	0/0:18,0:18:30.10:0,30,1175	0/0:10,0:10:9.03:0,9,102	0/0:11,0:11:6.01:0,6,70	./.	./.	./.	./.	./.	0/0:8,0:8:16.75:0,17,333	0/1:15,5:19:99:418,0,167	0/1:13,2:14:99:144,0,183	0/0:8,0:7:9.03:0,9,110
chr10	79538353	.	A	ACC	48.29	PASS	AB=1.000;AC=12;AF=0.316;AN=38;BaseQRankSum=4.114;DP=188;FS=0.000;HRun=0;HaplotypeScore=111.3735;InbreedingCoeff=0.0632;MQ=47.99;MQ0=3;MQRankSum=-2.470;QD=0.43;ReadPosRankSum=-2.708;VQSLOD=1.4129;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:21.02:0,21,230	./.	0/0:2,0:1:2.68:0,3,11	0/0:8,0:3:2.94:0,3,46	0/1:18,0:18:0.26:0,0,0	0/0:4,0:4:6.01:0,6,70	./.	0/1:11,0:10:29.58:30,0,82	1/1:6,5:11:5.94:76,6,0	0/0:8,0:8:3.11:0,3,87	1/1:12,0:12:2.68:11,3,0	./.	0/0:2,0:2:0:0,0,0	./.	./.	0/1:6,0:6:8.14:11,0,8	0/0:14,0:14:34.80:0,35,386	0/1:7,0:7:12.78:13,0,33	0/0:7,0:7:4.70:0,5,37	0/1:12,0:12:0:0,0,0	./.	./.	./.	./.	0/0:8,0:8:5.52:0,6,85	0/1:18,0:17:5.01:5,0,175	0/1:12,0:11:0.97:1,0,74	0/1:5,0:4:7.07:7,0,12
chr10	79538776	.	G	GA	10356.38	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-2.690;DP=546;FS=0.346;HRun=7;HaplotypeScore=60.2994;InbreedingCoeff=0.9795;MQ=77.82;MQ0=0;MQRankSum=-0.835;QD=29.51;ReadPosRankSum=-0.637;VQSLOD=5.0212;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:45.07:0,45,434	1/1:1,10:11:30.09:362,30,0	0/0:16,0:16:30.05:0,30,289	0/0:8,0:8:11.81:0,12,100	1/1:0,32:32:87.27:1051,87,0	0/0:20,0:20:51.08:0,51,492	0/0:16,0:16:45.06:0,45,429	1/1:8,27:35:78.22:930,78,0	1/1:1,18:19:42.13:507,42,0	1/1:3,27:30:78.24:941,78,0	1/1:0,22:22:60.18:725,60,0	0/0:17,0:17:48.08:0,48,464	0/0:15,0:15:42.07:0,42,405	0/0:25,0:25:72.11:0,72,695	1/1:5,22:26:30.87:634,31,0	1/1:0,25:25:63.19:761,63,0	0/0:16,0:16:45.07:0,45,434	1/1:0,2:2:6.02:72,6,0	1/1:5,23:28:46.22:815,46,0	1/1:4,17:21:51.08:584,51,0	1/1:3,8:11:21.06:254,21,0	0/0:16,0:16:39.05:0,39,371	0/0:17,0:17:48.08:0,48,463	0/0:11,0:11:30.05:0,30,290	1/1:3,8:11:21.54:255,22,0	1/1:1,23:24:69.21:834,69,0	1/1:0,41:40:99:1232,102,0	1/1:1,11:12:33.10:399,33,0
chr10	79539385	.	CTA	C	258.57	PASS	AC=12;AF=0.429;AN=28;BaseQRankSum=1.513;DP=108;FS=8.852;HRun=0;HaplotypeScore=22.0446;InbreedingCoeff=0.4563;MQ=88.49;MQ0=0;MQRankSum=-0.899;QD=8.08;ReadPosRankSum=0.548;VQSLOD=1.4136;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:10,0:7:2.22:0,2,17	0/0:12,0:6:4.83:0,5,42	0/0:4,0:4:0.47:0,0,1	1/1:1,8:9:18.06:220,18,0	0/0:1,0:1:3.01:0,3,40	1/1:6,0:6:0.47:1,0,0	./.	./.	./.	1/1:6,0:6:8.98:75,9,0	1/1:4,0:4:3:28,3,0	./.	./.	0/0:3,0:3:3:0,3,25	0/0:9,0:9:26.49:0,26,346	1/1:3,0:3:0.47:1,0,0	0/0:3,0:3:3.01:0,3,37	./.	./.	./.	1/1:4,0:4:3.01:36,3,0	0/0:4,0:4:3.01:0,3,45	./.	./.	./.	./.
chr10	79539402	.	TAC	T	494.33	PASS	AB=1.000;AC=28;AF=0.737;AN=38;BaseQRankSum=2.499;DP=76;FS=14.294;HRun=0;HaplotypeScore=18.6569;InbreedingCoeff=0.2353;MQ=71.40;MQ0=3;MQRankSum=-0.145;QD=11.50;ReadPosRankSum=0.013;VQSLOD=1.3310;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	1/1:10,0:5:1.52:5,2,0	0/0:14,0:3:3.46:0,3,25	1/1:2,0:2:2.99:24,3,0	1/1:9,0:9:19.75:97,20,0	0/0:1,0:1:3.01:0,3,57	1/1:3,0:3:8.94:67,9,0	./.	1/1:1,0:1:3:28,3,0	./.	1/1:0,3:3:9.03:136,9,0	1/1:1,1:2:6.01:70,6,0	1/1:1,0:1:3:25,3,0	1/1:1,0:1:3:25,3,0	./.	0/0:9,0:9:1.19:0,1,295	1/1:3,0:3:5.94:41,6,0	0/1:3,0:3:8.22:31,0,8	./.	./.	./.	0/1:2,0:2:5.79:6,0,32	0/0:1,0:1:2.99:0,3,24	./.	1/1:1,0:1:2.96:19,3,0	1/1:1,0:1:2.94:18,3,0	1/1:1,0:1:2.96:19,3,0
chr10	79539446	.	CAAT	C	3207.93	PASS	AC=30;AF=0.577;AN=52;BaseQRankSum=6.883;DP=160;FS=8.444;HRun=0;HaplotypeScore=60.0782;InbreedingCoeff=0.8529;MQ=78.85;MQ0=0;MQRankSum=-8.487;QD=36.87;ReadPosRankSum=0.475;VQSLOD=3.4281;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:15.05:0,15,228	./.	0/0:12,1:12:29.14:0,29,453	0/0:4,0:3:8.95:0,9,151	1/1:0,5:5:9.03:137,9,0	0/0:7,0:7:18.06:0,18,402	0/0:3,0:3:6.02:0,6,134	1/1:3,5:8:21.07:327,21,0	1/1:0,5:5:12.04:183,12,0	1/1:0,8:8:24.08:376,24,0	1/1:0,8:8:21.07:318,21,0	0/0:12,0:12:33.11:0,33,594	0/0:4,0:4:12.04:0,12,209	0/0:4,0:4:12.04:0,12,222	1/1:0,4:4:9.03:137,9,0	1/1:0,4:4:12.04:183,12,0	0/0:11,0:11:30.10:0,30,668	1/1:1,2:3:6.02:92,6,0	1/1:3,7:10:21.07:324,21,0	1/1:0,5:5:15.05:231,15,0	1/1:0,1:1:3.01:44,3,0	0/0:2,0:2:6.02:0,6,134	0/0:8,0:8:24.08:0,24,536	./.	1/1:0,9:9:24.08:366,24,0	1/1:0,4:4:12.04:186,12,0	1/1:0,9:9:27.09:413,27,0	1/1:2,2:4:6.02:92,6,0
chr10	79539454	.	GT	G	2673.51	PASS	AC=38;AF=0.731;AN=52;BaseQRankSum=7.082;DP=178;FS=13.141;HRun=9;HaplotypeScore=61.8843;InbreedingCoeff=0.8199;MQ=78.95;MQ0=0;MQRankSum=-7.313;QD=22.10;ReadPosRankSum=0.676;VQSLOD=3.4364;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:15.01:137,15,0	./.	0/0:17,0:15:1.10:0,1,216	0/0:7,0:4:9.03:0,9,104	1/1:0,6:6:17.98:155,18,0	0/0:7,0:7:21.03:0,21,229	0/0:2,0:2:6.02:0,6,69	1/1:4,7:11:23.93:200,24,0	1/1:0,5:5:14.97:124,15,0	1/1:0,9:9:26.98:231,27,0	1/1:0,10:10:26.95:222,27,0	1/1:0,12:12:36.02:329,36,0	1/1:0,4:4:12.01:110,12,0	1/1:0,5:5:15.01:137,15,0	1/1:0,4:4:11.98:100,12,0	1/1:0,5:5:14.97:125,15,0	0/0:11,0:11:33.09:0,33,370	1/1:0,2:2:5.99:49,6,0	1/1:4,5:9:20.89:168,21,0	1/1:1,5:6:11.97:96,12,0	1/1:0,1:1:2.98:22,3,0	0/0:4,0:4:12.04:0,12,139	0/0:9,0:9:24.07:0,24,277	./.	1/1:0,10:10:29.95:249,30,0	1/1:0,4:4:11.99:101,12,0	1/1:0,9:9:26.95:220,27,0	1/1:1,3:4:8.99:77,9,0
chr10	79539486	.	AAT	A	269.68	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=0.827;DP=253;FS=2.147;HRun=0;HaplotypeScore=89.6881;InbreedingCoeff=0.4497;MQ=70.76;MQ0=1;MQRankSum=-1.543;QD=12.26;ReadPosRankSum=-1.740;VQSLOD=2.7139;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:15.01:0,15,66	0/0:2,0:2:2.44:0,2,12	0/0:30,0:21:29.74:0,30,471	0/1:12,0:6:8.16:8,0,187	0/0:13,0:13:24.50:0,24,91	0/0:10,0:10:26.83:0,27,454	0/0:2,0:2:6.02:0,6,119	0/0:12,0:12:31.61:0,32,163	1/1:1,9:10:27.02:361,27,0	0/0:16,0:16:39.47:0,39,174	0/0:12,0:12:27.88:0,28,116	0/0:13,0:13:39.13:0,39,772	0/0:8,0:8:24.07:0,24,444	0/0:5,0:5:15.05:0,15,300	0/0:10,0:10:22.91:0,23,81	0/0:8,0:8:19.19:0,19,70	0/0:11,0:11:33.09:0,33,591	0/0:3,0:3:8.24:0,8,43	0/0:10,0:10:16.99:0,17,108	0/0:8,0:8:17.94:0,18,59	0/0:1,0:1:1.55:0,2,4	0/0:5,0:5:15.05:0,15,256	0/0:9,0:9:27.09:0,27,489	0/0:1,0:1:3.01:0,3,60	0/0:12,0:12:25.84:0,26,101	0/0:6,0:6:14.43:0,14,52	0/0:13,0:13:33.83:0,34,157	0/0:5,0:5:10.97:0,11,35
chr10	79539487	.	ATTT	A	3721.37	PASS	AB=0.600;AC=31;AF=0.554;AN=56;BaseQRankSum=5.942;DP=257;FS=12.197;HRun=14;HaplotypeScore=83.1625;InbreedingCoeff=0.8294;MQ=70.38;MQ0=1;MQRankSum=-8.100;QD=27.16;ReadPosRankSum=1.099;VQSLOD=1.6769;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:2,4:6:4.67:125,0,5	1/1:0,2:2:5.98:55,6,0	0/0:29,0:21:19.57:0,20,382	0/0:15,0:8:17.94:0,18,227	1/1:1,12:13:35.99:390,36,0	0/0:9,0:11:28.34:0,28,454	0/0:2,0:2:6.02:0,6,113	1/1:4,8:12:20.93:245,21,0	0/0:10,0:10:18.28:0,18,71	1/1:3,12:16:39:438,39,0	1/1:2,10:12:26.99:314,27,0	0/0:13,0:13:39.13:0,39,715	0/0:8,0:8:21.07:0,21,395	0/0:5,0:5:15.05:0,15,282	1/1:0,10:10:30.09:350,30,0	1/1:0,8:8:24.07:280,24,0	0/0:8,0:11:33.09:0,33,561	1/1:2,1:3:3:35,3,0	1/1:3,6:10:17.87:193,18,0	1/1:0,8:8:24.07:280,24,0	1/1:0,1:1:3.01:35,3,0	0/0:4,0:5:15.05:0,15,254	0/0:9,0:9:27.09:0,27,445	0/0:1,0:1:3.01:0,3,56	1/1:3,9:12:23.99:280,24,0	1/1:1,5:6:15.02:175,15,0	1/1:2,11:13:29.98:351,30,0	1/1:0,5:5:15.04:175,15,0
chr10	79540129	.	G	GA	15154.87	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-16.676;DP=679;FS=10.272;HRun=1;HaplotypeScore=63.6134;InbreedingCoeff=0.9991;MQ=66.48;MQ0=0;MQRankSum=-1.650;QD=40.85;ReadPosRankSum=3.890;VQSLOD=4.9839;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,1712	1/1:0,10:10:24.08:360,24,0	0/0:20,0:19:51.13:0,51,622	0/0:15,0:15:42.13:0,42,534	1/1:0,29:29:84.28:1259,84,0	0/0:23,0:23:66.21:0,66,856	0/0:31,0:31:90.28:0,90,1155	1/1:6,18:24:57.18:834,57,0	1/1:1,20:21:57.19:854,57,0	1/1:1,25:26:75.25:1124,75,0	1/1:0,25:25:66.22:989,66,0	0/0:25,0:25:72.23:0,72,935	0/0:21,0:21:63.20:0,63,818	0/0:18,0:18:54.18:0,54,701	1/1:0,23:23:60.20:900,60,0	1/1:0,29:29:78.26:1169,78,0	0/0:35,0:35:99:0,102,1324	1/1:1,13:14:39.13:584,39,0	1/1:2,16:18:45.15:674,45,0	1/1:0,29:29:84.28:1259,84,0	1/1:0,23:23:57.19:854,57,0	0/0:21,0:21:63.20:0,63,818	0/0:26,0:26:72.23:0,72,932	0/0:27,0:27:53.45:0,53,981	1/1:0,31:31:93.32:1394,93,0	1/1:0,31:31:93.30:1372,93,0	1/1:1,28:29:81.27:1214,81,0	1/1:1,8:9:21.07:315,21,0
chr10	79542105	.	A	AC	15295.33	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-0.045;DP=653;FS=8.649;HRun=1;HaplotypeScore=95.5941;InbreedingCoeff=0.9263;MQ=71.80;MQ0=0;MQRankSum=-0.639;QD=38.05;ReadPosRankSum=2.785;VQSLOD=4.9479;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:77.74:0,78,920	1/1:0,11:11:33.03:456,33,0	0/0:20,0:20:35.94:0,36,527	0/0:16,0:16:44.87:0,45,461	1/1:0,32:32:96.15:1342,96,0	0/0:23,0:23:63.19:0,63,848	0/0:9,0:9:27.09:0,27,377	1/1:0,36:36:99:1370,105,0	1/1:1,24:25:63.21:921,63,0	1/1:0,40:40:99:1560,114,0	1/1:0,20:20:57.19:830,57,0	0/0:18,0:18:54.16:0,54,715	0/0:22,0:22:66.21:0,66,905	0/0:19,0:19:57.17:0,57,751	1/1:0,22:22:57.19:834,57,0	1/1:1,27:28:50.98:988,51,0	0/0:29,0:29:78.24:0,78,1046	1/1:0,15:15:39.06:536,39,0	1/1:1,27:27:81.25:1150,81,0	1/1:0,44:44:99:1784,126,0	1/1:0,15:15:42.14:614,42,0	0/0:29,0:29:87.26:0,87,1161	0/0:20,0:20:60.13:0,60,768	0/0:17,0:17:48.10:0,48,647	0/1:9,0:9:19.13:28,0,19	1/1:2,24:26:68.79:954,69,0	1/1:0,44:44:99:1711,117,0	1/1:0,7:7:15.05:217,15,0
chr10	79542463	.	T	TA	13015.08	PASS	AB=0.579;AC=33;AF=0.589;AN=56;BaseQRankSum=-4.659;DP=610;FS=19.021;HRun=5;HaplotypeScore=71.9944;InbreedingCoeff=0.9203;MQ=67.67;MQ0=0;MQRankSum=-3.055;QD=33.29;ReadPosRankSum=2.391;VQSLOD=3.1527;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,16:21:41.96:508,42,0	1/1:0,10:10:27.09:355,27,0	0/0:22,0:23:42.72:0,43,527	0/0:27,0:26:17.57:0,18,632	1/1:1,30:31:81.22:1046,81,0	0/0:18,0:18:51.13:0,51,548	0/0:14,0:14:39.08:0,39,410	1/1:1,30:31:90.24:1126,90,0	1/1:1,21:22:24.94:678,25,0	1/1:5,26:31:81.25:1049,81,0	1/1:1,16:17:42.14:552,42,0	0/0:19,0:19:57.12:0,57,604	0/0:19,0:19:57.13:0,57,604	0/0:20,0:20:57.14:0,57,612	1/1:2,18:20:45.15:592,45,0	1/1:0,25:25:69.22:908,69,0	0/0:15,0:15:39.02:0,39,387	0/1:3,8:11:33.58:253,0,34	1/1:2,16:18:48.16:632,48,0	1/1:2,25:27:75.24:987,75,0	1/1:0,5:5:12.04:158,12,0	0/0:18,0:18:45.08:0,45,467	0/0:24,0:24:69.17:0,69,741	0/0:20,0:20:60.15:0,60,644	1/1:0,15:15:42.14:553,42,0	1/1:4,36:40:99:1379,105,0	1/1:5,39:44:99:1535,117,0	1/1:2,21:23:54.17:705,54,0
chr10	79543930	.	TAA	T	4779.10	PASS	AB=0.750;AC=30;AF=0.536;AN=56;BaseQRankSum=9.897;DP=444;FS=2.551;HRun=10;HaplotypeScore=138.7327;InbreedingCoeff=0.7950;MQ=58.54;MQ0=4;MQRankSum=-9.503;QD=18.60;ReadPosRankSum=2.958;VQSLOD=3.0720;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:10:17.02:0,17,140	1/1:6,5:11:26.95:212,27,0	0/0:34,0:13:17.04:0,17,178	0/0:24,0:9:8.75:0,9,57	1/1:18,10:28:68.61:600,69,0	0/0:18,0:18:51.15:0,51,760	0/0:14,0:14:36.12:0,36,548	1/1:8,16:24:53.33:575,53,0	1/1:7,10:17:38.76:375,39,0	1/1:12,5:17:34.71:302,35,0	1/1:13,6:19:41.75:360,42,0	0/0:5,0:5:9.01:0,9,92	0/0:16,0:16:38.93:0,39,401	0/0:7,0:7:15.01:0,15,162	1/1:12,5:17:28.98:253,29,0	1/1:10,5:15:37.59:323,38,0	0/0:13,0:13:30.08:0,30,440	0/1:4,2:5:21.58:88,0,22	1/1:6,2:8:5.96:66,6,0	1/1:27,3:30:56.92:439,57,0	1/1:3,2:5:5.22:40,5,0	0/0:15,0:17:41.79:0,42,574	0/0:16,0:16:39.13:0,39,598	0/0:11,0:10:27.09:0,27,419	1/1:18,2:20:50.28:511,50,0	0/1:6,3:9:9.28:118,0,9	1/1:21,8:29:57.10:476,57,0	1/1:1,1:2:5.23:40,5,0
chr10	79543936	.	A	AAAC	8124.74	PASS	AB=0.864;AC=28;AF=0.500;AN=56;BaseQRankSum=9.642;DP=463;FS=2.818;HRun=0;HaplotypeScore=156.5585;InbreedingCoeff=0.7322;MQ=55.48;MQ0=7;MQRankSum=-9.773;QD=29.98;ReadPosRankSum=3.512;VQSLOD=5.1813;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:16.38:0,16,81	1/1:6,4:10:29.95:405,30,0	0/0:36,0:11:20.71:0,21,238	0/0:32,0:10:9.02:0,9,67	1/1:17,11:28:64.66:949,65,0	0/0:19,0:19:57.14:0,57,791	0/0:15,0:15:42.05:0,42,571	0/1:28,1:28:2.34:464,0,2	1/1:16,3:19:20.92:443,21,0	1/1:13,5:16:40.76:575,41,0	1/1:12,8:20:24.85:609,25,0	0/0:5,0:5:8.86:0,9,58	0/0:14,0:14:15.58:0,16,185	0/0:6,0:6:14.73:0,15,106	1/1:11,5:16:5.50:489,5,0	1/1:14,5:19:50.65:613,51,0	0/0:12,0:12:33.04:0,33,447	0/1:6,0:5:5.72:118,0,6	1/1:7,0:7:1.89:76,2,0	1/1:10,17:27:52.35:1109,52,0	0/1:2,2:4:0.02:72,0,0	0/0:18,0:17:47.50:0,48,602	0/0:16,0:16:45.14:0,45,661	0/0:11,0:11:27.07:0,27,369	1/1:8,14:22:62.52:971,63,0	0/1:11,3:13:3.24:269,0,3	1/1:22,8:30:69.04:876,69,0	1/1:1,1:2:6.01:87,6,0
chr10	79543942	.	A	AAAC	6401.45	PASS	AB=0.817;AC=20;AF=0.357;AN=56;BaseQRankSum=10.223;DP=486;FS=43.266;HRun=0;HaplotypeScore=154.8112;InbreedingCoeff=0.0211;MQ=52.90;MQ0=12;MQRankSum=-10.711;QD=20.45;ReadPosRankSum=6.089;VQSLOD=2.8747;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:19.14:0,19,180	0/1:6,4:10:5.43:334,0,5	0/0:45,0:10:21.40:0,21,231	0/1:37,0:14:4.29:4,0,31	0/1:15,11:26:18.59:720,0,19	0/0:22,0:22:57.19:0,57,900	0/0:15,0:15:34.11:0,34,648	0/1:31,1:31:99:345,0,144	0/1:17,3:19:99:289,0,144	0/1:13,5:16:48.70:325,0,49	0/1:17,8:25:18:521,0,18	0/0:5,0:5:12.01:0,12,175	0/0:16,0:16:32.95:0,33,452	0/0:5,0:5:15.04:0,15,209	0/1:12,5:17:5.03:435,0,5	0/1:12,5:17:4.21:390,0,4	0/0:11,0:11:27.09:0,27,454	0/1:5,0:5:3:3,0,38	0/1:8,1:7:13.68:129,0,14	0/1:9,17:27:19.96:1101,0,20	1/1:2,2:4:7.84:111,8,0	0/0:17,0:16:48.15:0,48,743	0/0:17,0:17:48.13:0,48,719	0/0:12,0:12:33.09:0,33,497	1/1:22,0:22:16.49:623,16,0	0/1:15,3:15:3.48:359,0,3	0/1:15,8:23:36.01:608,0,36	1/1:2,1:3:8.05:104,8,0
chr10	79543946	.	C	CA	1886.95	PASS	AB=0.976;AC=28;AF=0.500;AN=56;BaseQRankSum=9.665;DP=502;FS=8.654;HRun=12;HaplotypeScore=161.0801;InbreedingCoeff=0.5120;MQ=51.14;MQ0=12;MQRankSum=-7.188;QD=5.06;ReadPosRankSum=-0.117;VQSLOD=0.5053;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:7:9.48:0,9,50	1/1:9,2:12:4.70:59,5,0	0/1:48,0:11:3.60:4,0,20	0/1:38,0:13:7.32:7,0,18	1/1:19,7:27:27.73:184,28,0	0/0:21,0:22:7.96:0,8,252	0/0:14,0:15:37.17:0,37,250	1/1:33,0:33:3.77:135,4,0	0/1:21,0:20:0.38:0,0,13	1/1:13,5:16:25.34:160,25,0	1/1:17,7:25:29.13:236,29,0	0/1:5,0:5:10.97:17,0,11	0/0:14,0:14:8.84:0,9,67	0/0:9,0:9:9.97:0,10,48	1/1:12,6:18:17.23:175,17,0	0/1:15,2:18:7.92:92,0,8	0/0:10,0:10:25.68:0,26,179	0/1:6,0:6:6.96:7,0,17	1/1:8,1:7:3.15:39,3,0	1/1:11,15:27:44.83:364,45,0	0/0:5,0:5:1.76:0,2,6	0/0:16,0:15:24.43:0,24,228	0/0:14,1:15:12.56:0,13,252	0/0:13,0:13:26.73:0,27,169	1/1:20,0:20:54.18:301,54,0	1/1:17,2:17:13.61:108,14,0	1/1:21,6:27:14.54:187,15,0	0/0:3,0:3:0.92:0,1,5
chr10	79543948	.	A	AAC	2082.80	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=10.249;DP=507;FS=15.904;HRun=0;HaplotypeScore=168.6828;InbreedingCoeff=-0.0810;MQ=53.27;MQ0=12;MQRankSum=-11.163;QD=7.21;ReadPosRankSum=3.139;VQSLOD=2.4414;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:18.03:0,18,194	0/1:11,0:11:17.60:97,0,18	0/0:51,0:12:21.89:0,22,140	0/0:41,0:15:12.68:0,13,76	1/1:26,0:26:2.12:164,2,0	0/0:22,0:22:59.89:0,60,766	0/0:15,0:15:44.96:0,45,594	0/1:33,0:32:99:156,0,246	0/1:19,0:18:60.83:64,0,61	0/1:19,0:17:59.07:75,0,59	0/1:27,0:27:77.52:157,0,78	0/0:6,0:6:11.95:0,12,138	0/0:14,0:14:30.06:0,30,377	0/0:9,0:9:24.05:0,24,300	0/1:18,0:18:66.63:157,0,67	0/1:18,0:18:99:106,0,99	0/0:10,0:10:27.08:0,27,390	0/1:6,0:6:44.05:44,0,72	0/1:8,0:6:7.38:32,0,7	0/1:26,0:26:62.58:120,0,63	1/1:5,0:5:6.31:35,6,0	0/0:16,0:15:42.12:0,42,585	0/0:15,0:15:41.88:0,42,605	0/0:13,0:13:36.10:0,36,487	1/1:4,16:22:63.06:823,63,0	0/1:21,0:18:49.40:49,0,159	0/1:27,0:27:97.07:162,0,97	0/1:3,0:3:13.28:13,0,16
chr10	79543949	.	A	AC	1052.12	PASS	AB=0.982;AC=18;AF=0.321;AN=56;BaseQRankSum=7.011;DP=505;FS=2.979;HRun=0;HaplotypeScore=161.3104;InbreedingCoeff=-0.2683;MQ=54.31;MQ0=12;MQRankSum=-8.120;QD=3.19;ReadPosRankSum=-0.676;VQSLOD=2.9616;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:17.87:0,18,159	0/1:10,1:11:35.88:76,0,36	0/0:52,0:12:9.36:0,9,150	0/1:41,0:15:4.95:5,0,101	0/1:24,2:26:29.09:127,0,29	0/0:20,0:20:55.75:0,56,688	0/0:15,0:15:44.94:0,45,542	0/1:31,0:30:99:139,0,179	0/1:18,0:17:52.94:53,0,107	0/1:19,0:17:34.07:34,0,61	0/1:28,0:28:83.41:83,0,94	0/0:6,0:6:11.33:0,11,101	0/0:14,0:14:29.90:0,30,312	0/0:9,0:9:24.01:0,24,256	0/1:17,1:18:71.72:102,0,72	0/1:18,0:18:61.71:62,0,95	0/0:10,0:10:27.08:0,27,356	0/1:6,0:6:53.52:54,0,67	0/1:8,0:6:12.04:12,0,22	0/1:27,0:27:75.13:75,0,84	0/1:5,0:5:4.48:26,0,4	0/0:15,0:14:41.99:0,42,528	0/0:15,0:15:40.81:0,41,562	0/0:13,0:13:36.09:0,36,438	1/1:22,0:23:28.10:224,28,0	0/1:20,1:18:19.90:20,0,167	0/1:26,1:27:99:115,0,146	0/1:3,0:3:10.18:10,0,23
chr10	79543959	.	C	CA	4092.92	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=7.022;DP=502;FS=4.462;HRun=12;HaplotypeScore=144.1537;InbreedingCoeff=0.8523;MQ=58.21;MQ0=11;MQRankSum=-3.637;QD=12.25;ReadPosRankSum=0.686;VQSLOD=2.1807;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:2.95:0,3,33	1/1:10,0:10:18.57:119,19,0	0/0:45,0:13:11.44:0,11,180	0/1:39,0:14:3.66:41,0,4	1/1:22,0:22:39.95:314,40,0	0/0:21,0:21:51.32:0,51,528	0/0:13,0:13:30.04:0,30,289	1/1:27,0:26:26.56:297,27,0	1/1:2,14:15:24.07:276,24,0	1/1:18,0:16:35.45:245,35,0	1/1:28,0:28:62.50:459,62,0	1/1:0,7:7:12.04:145,12,0	1/1:0,16:16:30.02:344,30,0	1/1:0,10:10:24.07:290,24,0	1/1:20,0:20:33.70:226,34,0	1/1:16,0:16:26.01:180,26,0	0/0:11,0:11:24.02:0,24,231	1/1:6,0:6:6.24:56,6,0	1/1:10,0:8:9.27:57,9,0	1/1:31,0:31:61.11:428,61,0	1/1:4,0:4:5.96:43,6,0	0/0:14,0:13:16.85:0,17,261	0/0:18,0:18:47.89:0,48,424	0/0:13,0:13:32.89:0,33,296	0/0:26,0:26:57.27:0,57,280	1/1:22,0:19:28.78:216,29,0	1/1:28,0:28:16.09:295,16,0	1/1:4,0:4:8.94:65,9,0
chr10	79543966	.	A	AC	6902.52	PASS	AB=0.900;AC=32;AF=0.571;AN=56;BaseQRankSum=5.313;DP=522;FS=16.803;HRun=4;HaplotypeScore=134.6498;InbreedingCoeff=0.6904;MQ=61.22;MQ0=11;MQRankSum=-3.795;QD=21.57;ReadPosRankSum=2.772;VQSLOD=3.3852;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:7:17.27:0,17,110	1/1:4,4:8:18.34:235,18,0	0/0:40,0:14:25.80:0,26,238	0/0:35,0:15:11.06:0,11,125	1/1:5,17:23:10.56:460,11,0	0/0:20,0:20:60.04:0,60,642	0/0:12,0:12:36.08:0,36,387	1/1:4,28:31:80.69:940,81,0	0/1:20,0:19:63:84,0,63	1/1:6,11:16:33.16:426,33,0	1/1:1,31:32:86.59:991,87,0	0/1:8,0:8:10.86:30,0,11	1/1:17,0:17:6.76:94,7,0	0/1:12,0:12:18.92:72,0,19	1/1:10,7:18:35.98:445,36,0	1/1:4,10:14:13.22:310,13,0	0/0:13,0:13:29.97:0,30,312	0/1:2,4:6:4.84:123,0,5	1/1:4,10:11:23.98:251,24,0	1/1:9,27:37:73.78:911,74,0	1/1:4,1:5:12.01:128,12,0	0/0:15,0:14:38.26:0,38,377	0/0:18,0:18:48.05:0,48,500	0/0:15,0:15:35.50:0,35,344	0/0:27,0:27:77.88:0,78,787	1/1:6,16:19:50.63:593,51,0	1/1:6,22:29:54.75:692,55,0	1/1:0,5:5:9.03:120,9,0
chr10	79544059	.	T	TA	2769.53	PASS	AB=0.766;AC=35;AF=0.625;AN=56;BaseQRankSum=2.824;DP=488;FS=1.763;HRun=14;HaplotypeScore=93.3333;InbreedingCoeff=0.4787;MQ=60.78;MQ0=3;MQRankSum=-0.855;QD=7.51;ReadPosRankSum=-3.920;VQSLOD=2.0056;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:9:14.25:0,14,41	1/1:7,4:12:10.80:137,11,0	0/0:12,0:9:5.46:0,5,32	0/0:12,0:10:8.02:0,8,43	1/1:23,8:31:17.17:238,17,0	0/0:21,0:21:39.14:0,39,266	0/1:5,2:9:30.92:49,0,31	1/1:17,8:26:9.42:176,9,0	0/0:20,0:20:3.20:0,3,7	1/1:20,3:24:28.79:212,29,0	1/1:19,5:25:28.19:255,28,0	1/1:14,0:16:22.33:108,22,0	1/1:3,0:8:2.84:14,3,0	1/1:4,1:10:8.68:55,9,0	0/1:8,9:17:12.28:105,0,12	1/1:4,11:16:7.49:156,7,0	0/0:17,1:19:7.82:0,8,160	0/1:7,4:11:24.45:102,0,24	1/1:16,5:19:14.86:102,15,0	1/1:21,4:26:25.91:194,26,0	1/1:3,12:15:17.95:151,18,0	0/1:13,0:15:17.98:18,0,112	0/1:15,8:24:1.92:231,0,2	0/0:12,0:12:17.67:0,18,113	0/0:13,0:13:2.29:0,2,5	1/1:15,3:19:23.34:148,23,0	1/1:17,6:26:48.95:351,49,0	1/1:9,4:15:7.84:151,8,0
chr10	79544073	.	AC	A	2723.81	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=3.812;DP=450;FS=1.973;HRun=3;HaplotypeScore=72.8736;InbreedingCoeff=0.7631;MQ=63.96;MQ0=3;MQRankSum=-0.038;QD=9.08;ReadPosRankSum=-0.975;VQSLOD=0.7657;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:7.90:0,8,57	1/1:11,0:11:15.79:85,16,0	0/0:14,0:11:7.59:0,8,154	0/1:11,0:11:4.39:4,0,63	1/1:23,1:24:22.30:186,22,0	0/0:22,0:22:60.13:0,60,682	0/0:8,0:8:21.46:0,21,196	1/1:23,0:23:48.84:328,49,0	1/1:0,15:15:24.03:277,24,0	1/1:25,1:26:40.62:336,41,0	1/1:21,0:21:17.46:144,17,0	0/0:12,0:12:26.90:0,27,234	0/0:6,0:6:11.98:0,12,108	0/0:8,0:8:11.95:0,12,90	1/1:13,1:14:0.28:63,0,0	1/1:17,0:17:21.13:146,21,0	0/0:17,0:17:39.32:0,39,397	0/1:13,0:13:21.35:59,0,21	1/1:17,1:15:18.25:142,18,0	1/1:19,0:19:32.22:211,32,0	1/1:14,0:14:19.73:105,20,0	0/0:15,0:15:41.08:0,41,412	0/0:25,0:25:54.83:0,55,464	0/0:10,0:10:23.78:0,24,271	1/1:0,14:14:15.05:183,15,0	1/1:18,0:17:30.92:229,31,0	1/1:28,0:27:67.29:408,67,0	0/1:13,0:13:0.50:27,0,1
chr10	79544440	.	A	AG	15645.57	PASS	AB=0.941;AC=33;AF=0.589;AN=56;BaseQRankSum=6.208;DP=669;FS=7.923;HRun=1;HaplotypeScore=128.2907;InbreedingCoeff=0.9414;MQ=60.39;MQ0=2;MQRankSum=-10.194;QD=38.44;ReadPosRankSum=-1.336;VQSLOD=3.3398;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.14:0,60,758	1/1:3,7:10:24.08:350,24,0	0/0:33,0:25:69.11:0,69,822	0/0:28,0:26:66.15:0,66,801	1/1:2,34:36:90.22:1290,90,0	0/0:27,0:27:81.25:0,81,1037	0/0:14,0:14:42.14:0,42,545	1/1:5,38:42:99:1770,123,0	1/1:2,25:27:78.22:1141,78,0	1/1:2,22:23:69.23:1015,69,0	1/1:3,20:23:63.19:892,63,0	0/0:15,0:15:45.13:0,45,570	0/0:20,0:20:60.20:0,60,779	0/0:20,0:20:57.19:0,57,740	1/1:2,19:21:60.14:870,60,0	1/1:4,23:27:72.23:1056,72,0	0/0:35,0:35:78.39:0,78,1137	1/1:3,9:12:35.98:447,36,0	1/1:3,16:17:51.13:737,51,0	1/1:1,30:31:93.17:1316,93,0	1/1:1,16:17:39.09:557,39,0	0/0:21,0:21:63.20:0,63,817	0/0:26,0:26:75.24:0,75,960	0/1:15,1:16:5.80:6,0,413	1/1:2,20:22:66.14:932,66,0	1/1:4,22:26:75.20:1077,75,0	1/1:3,34:35:99:1569,105,0	1/1:4,12:16:42.14:624,42,0
chr10	79544446	.	AG	A	825.07	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.001;DP=661;FS=10.957;HRun=1;HaplotypeScore=180.7792;InbreedingCoeff=0.9992;MQ=64.07;MQ0=2;MQRankSum=-5.743;QD=37.50;ReadPosRankSum=1.173;VQSLOD=1.3965;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.23:0,66,1054	0/0:10,0:10:30.10:0,30,479	0/0:34,0:28:79.11:0,79,1159	0/0:27,0:25:72.24:0,72,1093	0/0:36,0:36:96.31:0,96,1503	0/0:28,0:28:84.29:0,84,1343	0/0:16,0:16:48.16:0,48,765	0/0:44,0:43:99:0,126,1962	0/0:22,0:22:66.23:0,66,1053	0/0:26,0:26:78.27:0,78,1243	0/0:21,0:21:60.20:0,60,956	0/0:15,0:15:45.15:0,45,719	0/0:20,0:20:60.20:0,60,959	0/0:19,0:19:57.19:0,57,911	0/0:20,0:20:60.20:0,60,954	0/0:24,0:24:72.25:0,72,1149	0/0:35,0:35:99:0,99,1582	0/0:14,0:14:36.12:0,36,554	0/0:16,0:15:45.15:0,45,719	0/0:33,0:33:99:0,99,1577	0/0:14,0:14:39.13:0,39,622	0/0:20,0:20:60.20:0,60,959	0/0:26,0:26:78.22:0,78,1188	0/0:18,0:18:47.86:0,48,746	1/1:0,22:22:66.22:920,66,0	0/0:28,0:28:81.27:0,81,1271	0/0:35,0:33:99:0,105,1667	0/0:15,0:15:45.15:0,45,718
chr10	79544481	.	CTG	C	15721.93	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=14.460;DP=620;FS=3.497;HRun=0;HaplotypeScore=126.5513;InbreedingCoeff=0.9971;MQ=74.75;MQ0=1;MQRankSum=-12.601;QD=42.84;ReadPosRankSum=1.179;VQSLOD=5.9975;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.23:0,69,1339	1/1:0,7:7:21.07:341,21,0	0/0:27,0:27:76.27:0,76,1408	0/0:28,0:28:69.32:0,69,1310	1/1:0,32:32:84.28:1331,84,0	0/0:28,0:28:84.29:0,84,1689	0/0:15,0:15:42.08:0,42,779	1/1:3,33:37:99:1647,108,0	1/1:0,24:24:72.25:1153,72,0	1/1:0,25:25:72.23:1136,72,0	1/1:2,14:17:51.17:822,51,0	0/0:11,0:11:33.11:0,33,656	0/0:17,0:17:51.18:0,51,1035	0/0:13,0:13:39.12:0,39,756	1/1:1,14:15:39.13:631,39,0	1/1:1,19:20:60.20:971,60,0	0/0:28,0:28:78.25:0,78,1541	1/1:1,17:18:36.59:585,37,0	1/1:1,22:23:66.01:1032,66,0	1/1:4,27:31:84.20:1291,84,0	1/1:3,9:12:15.02:191,15,0	0/0:21,0:21:63.18:0,63,1166	0/0:25,0:25:74.06:0,74,1466	0/0:17,0:17:47.82:0,48,926	1/1:1,22:23:57.19:913,57,0	1/1:0,26:26:75.26:1215,75,0	1/1:0,35:34:96.33:1556,96,0	1/1:1,21:22:39.66:905,40,0
chr10	79544576	.	T	TA	800.39	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-3.133;DP=615;FS=0.000;HRun=8;HaplotypeScore=61.8147;InbreedingCoeff=0.6676;MQ=65.74;MQ0=1;MQRankSum=0.223;QD=16.01;ReadPosRankSum=-0.364;VQSLOD=3.4297;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,28:32:78.23:894,78,0	0/0:5,0:5:15.01:0,15,137	0/0:13,0:11:20.01:0,20,161	0/1:18,0:16:8.25:8,0,171	0/0:41,0:41:99:0,99,906	0/0:25,0:25:66.03:0,66,604	0/0:12,0:12:33.02:0,33,302	0/0:32,0:32:78.04:0,78,713	0/0:24,0:24:69.04:0,69,631	0/0:34,0:34:90.03:0,90,817	0/0:23,0:23:60.01:0,60,541	0/0:8,0:8:24.01:0,24,220	0/0:23,0:23:69.04:0,69,631	0/0:16,0:16:45.01:0,45,407	0/0:18,0:18:42:0,42,379	0/0:22,0:22:63.02:0,63,572	0/0:24,0:24:63.01:0,63,577	0/0:12,0:12:24.01:0,24,219	0/0:19,0:19:34.82:0,35,303	0/0:40,0:40:99:0,105,952	0/0:11,0:11:33.02:0,33,302	0/0:21,0:21:57.03:0,57,522	0/0:29,0:29:81.02:0,81,736	0/0:17,0:17:48:0,48,434	0/0:24,0:24:60.03:0,60,548	0/0:18,0:18:45.02:0,45,412	0/0:31,0:31:78:0,78,703	0/0:23,0:23:68.08:0,68,613
chr10	79545175	.	T	TA	8960.40	PASS	AB=0.563;AC=31;AF=0.554;AN=56;BaseQRankSum=4.752;DP=568;FS=1.103;HRun=0;HaplotypeScore=95.2758;InbreedingCoeff=0.9007;MQ=61.54;MQ0=1;MQRankSum=1.650;QD=28.18;ReadPosRankSum=3.290;VQSLOD=5.3495;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:80.15:0,80,641	1/1:0,6:6:15.04:174,15,0	0/0:12,0:11:30.09:0,30,401	0/0:23,0:20:59.75:0,60,675	1/1:6,14:20:18.14:467,18,0	0/0:26,0:26:75.23:0,75,1023	0/0:15,0:15:45.15:0,45,626	1/1:1,25:21:63.18:738,63,0	1/1:1,21:22:51.15:597,51,0	1/1:1,20:22:63.18:747,63,0	1/1:5,14:19:13.86:499,14,0	0/0:15,0:15:40.32:0,40,233	0/0:20,0:20:51.93:0,52,347	0/0:29,0:29:84.23:0,84,553	1/1:3,19:22:57.01:677,57,0	1/1:7,11:18:2.90:366,3,0	0/0:26,0:26:65.34:0,65,990	1/1:3,18:21:57.16:647,57,0	1/1:0,23:23:55.29:654,55,0	1/1:1,23:24:63.14:749,63,0	1/1:3,17:20:47.11:561,47,0	0/0:26,0:26:78.25:0,78,1073	0/0:12,0:12:33.11:0,33,458	0/0:13,0:13:36.08:0,36,481	0/1:4,14:18:11.61:421,0,12	1/1:4,21:25:31.17:713,31,0	1/1:1,23:24:63.18:734,63,0	1/1:0,8:8:18.06:217,18,0
chr10	79545176	.	C	CA	11592.71	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=9.177;DP=564;FS=8.192;HRun=7;HaplotypeScore=85.4167;InbreedingCoeff=0.9918;MQ=61.45;MQ0=1;MQRankSum=0.130;QD=28.21;ReadPosRankSum=1.429;VQSLOD=5.2560;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:34:73.84:425,74,0	1/1:6,0:6:15.05:180,15,0	0/0:13,0:10:15.02:0,15,142	0/0:25,0:21:47.01:0,47,406	1/1:20,0:20:18.26:474,18,0	0/0:25,0:25:69.11:0,69,666	0/0:16,0:16:36.05:0,36,348	1/1:26,0:21:63.18:743,63,0	1/1:21,0:21:51.16:612,51,0	1/1:22,0:22:63.19:752,63,0	1/1:19,0:19:45.14:537,45,0	1/1:1,14:15:39.12:471,39,0	1/1:3,17:20:45.13:544,45,0	1/1:5,23:28:69.21:834,69,0	1/1:22,0:22:57.17:684,57,0	1/1:17,0:17:33.10:397,33,0	0/0:25,0:25:69.11:0,69,666	1/1:20,0:20:54.17:649,54,0	1/1:23,0:23:60.13:693,60,0	1/1:24,0:24:72.10:804,72,0	1/1:20,0:20:51.15:603,51,0	0/0:25,0:25:72.11:0,72,692	0/0:11,0:11:27.03:0,27,255	0/0:13,0:13:36.04:0,36,342	1/1:18,0:18:39.11:461,39,0	1/1:24,0:24:63.19:756,63,0	1/1:24,0:24:63.19:757,63,0	1/1:8,0:8:18.06:216,18,0
chr10	79546411	.	T	TA	4742.85	PASS	AB=0.695;AC=29;AF=0.518;AN=56;BaseQRankSum=-9.687;DP=462;FS=1.827;HRun=11;HaplotypeScore=55.3051;InbreedingCoeff=0.7409;MQ=73.60;MQ0=0;MQRankSum=-0.861;QD=17.63;ReadPosRankSum=-1.245;VQSLOD=5.4027;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:33:55:0,55,159	1/1:1,3:4:6.01:61,6,0	0/1:14,1:10:38.36:38,0,43	0/0:15,0:11:2.73:0,3,54	1/1:6,10:18:0.53:215,1,0	0/0:20,0:21:49.82:0,50,377	0/0:10,0:10:20.86:0,21,156	1/1:10,19:29:32.40:484,32,0	1/1:3,12:15:18.84:367,19,0	1/1:3,14:18:35.12:382,35,0	1/1:3,15:18:15.80:331,16,0	0/0:7,0:7:17.91:0,18,139	0/0:11,0:12:25.94:0,26,191	0/0:19,0:20:52.81:0,53,398	1/1:4,15:19:42.08:426,42,0	0/1:2,12:15:4.55:307,0,5	0/0:18,0:18:17.54:0,18,318	1/1:0,13:13:30.06:304,30,0	0/1:7,12:19:0.92:336,0,1	1/1:9,10:20:14.90:298,15,0	1/1:3,7:10:18.04:183,18,0	0/0:17,0:17:35.81:0,36,276	0/0:14,0:15:25.92:0,26,192	0/0:11,0:11:32.87:0,33,255	0/0:14,0:14:35.85:0,36,279	1/1:8,13:23:12.89:338,13,0	1/1:5,18:23:31.98:446,32,0	1/1:2,8:10:8.38:225,8,0
chr10	79546847	.	TTC	T	196.45	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.301;DP=612;FS=0.000;HRun=0;HaplotypeScore=121.0001;InbreedingCoeff=0.9894;MQ=63.13;MQ0=4;MQRankSum=0.953;QD=21.83;ReadPosRankSum=0.495;VQSLOD=4.0835;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:84.29:0,84,1473	0/0:17,0:16:39.13:0,39,692	0/0:23,0:14:41.17:0,41,687	0/0:19,0:16:42.14:0,42,678	0/0:17,0:17:42.14:0,42,727	0/0:25,0:25:69.24:0,69,1213	0/0:27,0:27:72.25:0,72,1233	0/0:39,0:38:99:0,105,1810	0/0:20,0:20:54.19:0,54,958	0/0:32,0:31:90.31:0,90,1593	0/0:11,0:10:21.07:0,21,372	0/0:18,0:18:51.17:0,51,895	0/0:34,0:34:93.30:0,93,1602	0/0:22,0:22:63.22:0,63,1083	0/0:25,0:25:69.24:0,69,1213	0/0:17,0:17:48.16:0,48,851	0/0:34,0:34:90.28:0,90,1524	0/0:22,0:22:54.18:0,54,946	0/0:19,0:19:48.16:0,48,835	0/0:14,0:14:33.11:0,33,584	0/0:36,0:34:81.28:0,81,1437	0/0:17,0:17:39.11:0,39,644	0/0:8,0:8:24.08:0,24,406	0/0:20,0:20:51.17:0,51,893	1/1:1,8:9:21.07:289,21,0	0/0:16,0:16:48.16:0,48,852	0/0:27,0:27:72.25:0,72,1276	0/0:16,0:16:48.16:0,48,839
chr10	79547776	.	GT	G	5973.12	PASS	AB=0.867;AC=31;AF=0.554;AN=56;BaseQRankSum=8.411;DP=456;FS=2.182;HRun=9;HaplotypeScore=56.6454;InbreedingCoeff=0.9272;MQ=76.52;MQ0=0;MQRankSum=-1.233;QD=21.72;ReadPosRankSum=1.647;VQSLOD=5.7683;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:18:33.01:302,33,0	1/1:1,7:8:18.01:165,18,0	0/0:19,1:19:17.04:0,17,365	0/0:5,0:5:8.76:0,9,104	1/1:1,22:23:56.86:494,57,0	0/0:24,0:24:63.18:0,63,719	0/1:11,2:13:6.37:6,0,187	1/1:4,20:24:60.01:544,60,0	0/0:14,0:14:33.05:0,33,350	1/1:2,28:30:84.03:765,84,0	1/1:1,18:19:51.03:467,51,0	0/0:9,0:9:18.05:0,18,208	0/0:14,0:14:42.12:0,42,485	0/0:11,0:11:30.08:0,30,336	1/1:1,10:11:27.01:247,27,0	1/1:1,12:13:36.02:329,36,0	0/0:22,0:22:66.18:0,66,751	1/1:1,7:8:18.01:165,18,0	1/1:2,13:15:39.02:357,39,0	1/1:4,26:30:77.98:704,78,0	1/1:1,14:15:39.02:357,39,0	0/0:11,0:11:30.06:0,30,326	0/0:11,0:11:27.07:0,27,303	0/0:15,0:15:45.12:0,45,510	0/0:2,0:24:59.81:0,60,315	1/1:2,14:16:42.02:384,42,0	1/1:2,19:21:51.03:467,51,0	1/1:0,11:11:24.01:220,24,0
chr10	79548340	.	AT	A	9332.49	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=19.751;DP=607;FS=6.887;HRun=5;HaplotypeScore=117.9210;InbreedingCoeff=0.9952;MQ=76.46;MQ0=0;MQRankSum=-1.997;QD=30.80;ReadPosRankSum=1.187;VQSLOD=3.9879;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.32:0,96,1310	1/1:0,11:11:33.09:374,33,0	0/0:11,0:11:27.02:0,27,345	0/0:14,0:14:19.41:0,19,358	1/1:3,15:18:42.12:474,42,0	0/0:34,0:34:96.32:0,96,1313	0/0:14,0:14:39.13:0,39,534	1/1:1,30:31:90.24:1011,90,0	0/0:31,0:31:90.28:0,90,1201	1/1:2,22:24:66.18:740,66,0	1/1:1,23:24:69.20:783,69,0	0/0:21,0:21:60.20:0,60,820	0/0:23,0:23:63.20:0,63,848	0/0:22,0:22:63.20:0,63,845	1/1:0,35:35:99:1157,102,0	1/1:1,18:19:54.15:613,54,0	0/0:16,0:16:45.15:0,45,614	1/1:1,6:7:15.04:170,15,0	1/1:2,17:19:51.14:577,51,0	1/1:1,33:34:99:1123,99,0	1/1:1,9:10:18.05:204,18,0	0/0:23,0:23:66.20:0,66,871	0/0:30,0:30:87.26:0,87,1151	0/0:14,0:14:42.14:0,42,575	0/0:17,0:17:45.15:0,45,615	1/1:1,25:26:75.21:850,75,0	1/1:0,38:38:90.25:1019,90,0	1/1:0,7:7:21.06:238,21,0
chr10	79551103	.	CT	C	801.73	PASS	AB=0.909;AC=7;AF=0.125;AN=56;BaseQRankSum=-2.365;DP=495;FS=8.907;HRun=9;HaplotypeScore=91.9088;InbreedingCoeff=0.8386;MQ=82.14;MQ0=0;MQRankSum=-2.735;QD=12.93;ReadPosRankSum=-0.636;VQSLOD=2.7168;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.20:0,66,762	0/0:5,0:5:14.24:0,14,70	0/0:25,0:24:38.87:0,39,564	0/0:14,0:14:32.56:0,33,289	0/0:29,0:29:40.02:0,40,296	0/0:15,0:15:39.12:0,39,450	0/0:14,0:14:42.11:0,42,475	0/0:29,0:29:21.99:0,22,235	0/0:17,0:17:48.13:0,48,546	0/0:24,0:24:64.82:0,65,335	0/0:21,0:21:44.37:0,44,249	1/1:3,13:16:39.02:357,39,0	1/1:1,13:14:32.89:284,33,0	1/1:0,12:12:33.02:302,33,0	0/0:16,0:16:38.37:0,38,189	0/0:14,0:14:37.29:0,37,191	0/0:11,0:11:26.91:0,27,269	0/0:12,0:12:31.86:0,32,174	0/0:13,0:13:27.21:0,27,126	0/0:19,0:19:52.03:0,52,287	0/0:13,0:13:5.86:0,6,142	0/0:7,0:7:18.04:0,18,198	0/1:18,2:20:3.75:4,0,458	0/0:12,0:12:36.11:0,36,415	0/0:23,1:24:41.73:0,42,727	0/0:18,0:18:26.24:0,26,197	0/0:44,0:44:93.27:0,93,585	0/0:14,0:14:20.20:0,20,106
chr10	79551188	.	T	TA	11364.61	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=3.669;DP=528;FS=1.486;HRun=3;HaplotypeScore=82.8569;InbreedingCoeff=0.9831;MQ=78.87;MQ0=0;MQRankSum=-2.313;QD=37.26;ReadPosRankSum=-1.794;VQSLOD=4.4183;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.24:0,81,960	1/1:1,4:5:15.04:190,15,0	0/0:16,0:16:45.08:0,45,491	0/0:14,0:14:28.61:0,29,303	1/1:0,25:25:63.21:880,63,0	0/0:18,0:18:51.16:0,51,612	0/0:15,0:15:39.10:0,39,455	1/1:3,30:34:93.28:1263,93,0	0/0:17,0:17:51.16:0,51,612	1/1:4,20:23:66.21:887,66,0	1/1:2,21:23:63.21:868,63,0	0/0:10,0:10:27.02:0,27,306	0/0:4,0:4:9.03:0,9,108	0/0:5,0:5:15.05:0,15,180	1/1:3,21:24:72.20:954,72,0	1/1:6,12:18:48.15:651,48,0	0/0:22,0:22:57.12:0,57,666	1/1:1,9:10:27.09:378,27,0	1/1:1,23:24:72.22:975,72,0	1/1:5,20:25:63.18:847,63,0	1/1:2,16:18:51.16:696,51,0	0/0:15,0:15:39.11:0,39,459	0/0:19,0:19:48.15:0,48,572	0/0:24,0:24:66.20:0,66,791	0/0:14,0:14:39.12:0,39,467	1/1:7,25:32:87.26:1170,87,0	1/1:5,34:39:99:1440,108,0	1/1:0,4:4:12.04:168,12,0
chr10	79551270	.	AT	A	10109.97	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=11.357;DP=534;FS=19.869;HRun=2;HaplotypeScore=72.9504;InbreedingCoeff=0.9921;MQ=77.59;MQ0=0;MQRankSum=-1.542;QD=34.62;ReadPosRankSum=3.518;VQSLOD=3.1191;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.18:0,57,834	1/1:0,12:12:30.10:389,30,0	0/0:24,0:24:66.22:0,66,976	0/0:20,0:20:54.18:0,54,800	1/1:0,22:22:63.20:818,63,0	0/0:18,0:18:51.16:0,51,738	0/0:28,0:28:84.24:0,84,1234	1/1:1,26:27:78.24:998,78,0	0/0:13,0:13:39.13:0,39,585	1/1:1,23:24:69.22:896,69,0	1/1:0,19:19:39.12:506,39,0	0/0:9,0:9:27.09:0,27,404	0/0:7,0:7:14.98:0,15,176	0/0:8,0:8:24.05:0,24,335	1/1:0,24:24:63.20:818,63,0	1/1:1,19:20:57.19:739,57,0	0/0:13,0:13:36.12:0,36,538	1/1:1,12:13:39.13:502,39,0	1/1:3,14:17:11.07:570,11,0	1/1:0,14:14:39.13:506,39,0	1/1:0,17:17:42.14:545,42,0	0/0:16,0:16:48.14:0,48,681	0/0:16,0:16:48.15:0,48,700	0/0:28,0:28:84.28:0,84,1259	0/0:22,0:22:66.22:0,66,989	1/1:1,25:26:75.20:954,75,0	1/1:1,33:34:96.31:1246,96,0	1/1:0,23:23:48.16:623,48,0
chr10	79551451	.	GGTGTGTGTGT	G	4065.02	PASS	AB=1.000;AC=21;AF=0.420;AN=50;BaseQRankSum=9.198;DP=529;FS=0.000;HRun=0;HaplotypeScore=181.7592;InbreedingCoeff=0.7428;MQ=62.61;MQ0=11;MQRankSum=-7.204;QD=20.74;ReadPosRankSum=3.242;VQSLOD=2.7650;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:1.76:0,2,16	./.	0/0:35,0:17:2.98:0,3,22	0/0:24,0:13:2.60:0,3,10	1/1:10,6:16:15.05:447,15,0	0/0:29,0:29:42.13:0,42,1674	0/0:21,0:23:47.98:0,48,1815	0/1:30,0:29:0:0,0,0	0/0:7,0:15:20.10:0,20,205	1/1:13,1:14:3.01:89,3,0	1/1:13,8:21:15.05:447,15,0	0/0:2,0:17:3.01:0,3,129	0/0:7,0:19:15.94:0,16,482	0/0:6,0:25:4.37:0,4,111	1/1:13,5:18:15.05:447,15,0	1/1:11,4:14:6.02:179,6,0	0/0:30,0:32:42.54:0,43,1448	./.	1/1:13,2:15:6.02:179,6,0	1/1:13,10:23:30.10:849,30,0	./.	0/0:11,0:11:15.05:0,15,709	0/0:18,0:18:21.07:0,21,941	0/0:30,0:31:54.15:0,54,2241	0/0:15,0:20:12.01:0,12,311	1/1:12,7:19:21.07:625,21,0	1/1:13,7:20:21.07:625,21,0	1/1:2,2:4:6.02:179,6,0
chr10	79551857	.	TAA	T	7389.99	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=11.564;DP=499;FS=4.805;HRun=10;HaplotypeScore=82.5199;InbreedingCoeff=0.9543;MQ=73.16;MQ0=1;MQRankSum=-0.952;QD=28.31;ReadPosRankSum=1.138;VQSLOD=5.1788;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:15:35.56:0,36,505	1/1:1,4:5:9.02:100,9,0	0/0:7,0:7:8.78:0,9,119	0/0:17,0:16:2.81:0,3,372	1/1:5,30:34:87.23:970,87,0	0/0:22,0:22:57.19:0,57,905	0/0:14,0:15:41.63:0,42,627	1/1:5,17:22:51.13:568,51,0	0/0:2,0:21:37.30:0,37,129	1/1:2,15:17:45.11:502,45,0	1/1:1,16:17:48.13:535,48,0	0/0:10,0:10:27.09:0,27,425	0/0:17,0:18:53.67:0,54,811	0/0:11,0:11:33.11:0,33,507	1/1:1,23:24:51.13:569,51,0	1/1:0,7:7:15.04:167,15,0	0/0:21,0:21:60.20:0,60,952	1/1:0,7:7:15.04:167,15,0	1/1:2,11:13:33.09:368,33,0	1/1:2,34:36:99:1103,99,0	1/1:0,16:16:45.12:502,45,0	0/0:14,0:15:42.14:0,42,648	0/0:20,0:21:53.67:0,54,816	0/0:18,0:18:48.16:0,48,754	0/0:3,0:25:63.11:0,63,619	1/1:2,29:31:87.23:970,87,0	1/1:2,20:22:54.14:602,54,0	1/1:1,8:9:24.05:268,24,0
chr10	79555207	.	C	CACAG	2572.22	PASS	AB=0.883;AC=28;AF=0.500;AN=56;BaseQRankSum=-2.006;DP=549;FS=4.180;HRun=0;HaplotypeScore=103.9285;InbreedingCoeff=-0.0843;MQ=51.74;MQ0=24;MQRankSum=-1.480;QD=6.14;ReadPosRankSum=-2.147;VQSLOD=1.9884;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:21:8.90:61,9,0	0/1:9,0:9:1.21:121,0,1	0/0:5,0:1:2.74:0,3,12	0/0:2,0:1:2.74:0,3,12	0/1:30,0:27:16.95:38,0,17	0/0:34,0:34:27.03:0,27,539	0/0:31,0:28:50.24:0,50,377	1/1:32,0:28:35.29:250,35,0	0/0:23,0:23:18.42:0,18,144	1/1:26,0:26:9.11:500,9,0	0/1:14,0:13:46.95:100,0,47	0/1:5,0:17:7.69:8,0,55	0/1:12,0:19:17.48:17,0,143	0/1:16,0:15:77.70:78,0,109	0/1:6,20:27:41.75:67,0,42	1/1:20,0:19:10.76:234,11,0	0/0:13,0:12:29.82:0,30,262	1/1:8,0:8:6:79,6,0	1/1:10,0:10:15.71:105,16,0	0/1:13,0:12:51.90:52,0,59	0/1:32,0:29:39.09:191,0,39	0/1:18,2:24:14.95:15,0,204	0/0:14,0:21:5.89:0,6,180	0/1:9,0:13:52.70:57,0,53	0/1:19,0:21:82.87:88,0,83	0/1:22,0:21:99:231,0,124	0/1:24,0:24:9.97:350,0,10	1/1:14,0:11:0.03:101,0,0
chr10	79557456	.	CG	C	701.86	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.943;DP=602;FS=8.011;HRun=1;HaplotypeScore=63.8764;InbreedingCoeff=0.9842;MQ=88.95;MQ0=0;MQRankSum=-2.864;QD=35.09;ReadPosRankSum=0.864;VQSLOD=3.1522;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.32:0,93,1478	0/0:5,0:5:15.05:0,15,239	0/0:25,0:25:72.20:0,72,1085	0/0:21,0:21:54.15:0,54,801	0/0:18,0:18:51.16:0,51,788	0/0:27,0:27:75.24:0,75,1165	0/0:23,0:23:69.19:0,69,1067	0/0:30,0:30:90.31:0,90,1438	1/1:0,20:20:57.19:797,57,0	0/0:20,0:20:60.19:0,60,936	0/0:21,0:21:63.21:0,63,996	0/0:20,0:20:57.15:0,57,878	0/0:21,0:21:63.21:0,63,1003	0/0:24,0:24:72.25:0,72,1150	0/0:25,0:24:72.20:0,72,1115	0/0:27,0:27:81.28:0,81,1293	0/0:18,0:18:54.16:0,54,837	0/0:17,0:17:48.16:0,48,766	0/0:23,0:23:69.21:0,69,1037	0/0:22,0:22:66.22:0,66,1041	0/0:22,0:22:63.21:0,63,997	0/0:18,0:18:51.17:0,51,809	0/0:20,0:20:60.18:0,60,932	0/0:23,0:23:66.20:0,66,1029	0/0:13,0:13:39.13:0,39,622	0/0:28,0:28:81.28:0,81,1292	0/0:27,0:27:78.27:0,78,1239	0/0:11,0:11:33.11:0,33,526
chr10	79557686	.	TACACACACACACACAC	T	6687.19	PASS	AB=0.766;AC=22;AF=0.478;AN=46;BaseQRankSum=8.301;DP=400;FS=9.974;HRun=0;HaplotypeScore=189.0381;InbreedingCoeff=0.3400;MQ=60.30;MQ0=5;MQRankSum=-7.183;QD=37.57;ReadPosRankSum=3.516;VQSLOD=3.4180;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:22:99:297,0,120	1/1:3,3:6:6.02:169,6,0	0/0:21,0:15:39.13:0,39,2165	0/0:20,0:16:42.05:0,42,2102	./.	0/0:21,0:21:42.62:0,43,2791	0/0:20,0:20:39.13:0,39,2177	1/1:7,10:17:30.07:1061,30,0	0/0:11,0:12:18.06:0,18,1056	1/1:4,4:8:18.04:660,18,0	./.	0/1:14,0:19:99:136,0,171	0/1:5,0:9:16.61:118,0,17	0/1:6,0:10:9.06:210,0,9	./.	1/1:2,7:9:9.03:375,9,0	0/0:29,0:29:72.25:0,72,4993	1/1:4,0:3:2.92:17,3,0	0/1:6,9:15:83.13:873,0,83	./.	./.	0/0:3,0:11:3.01:0,3,50	0/0:8,0:16:6.02:0,6,97	0/0:15,0:18:5.99:0,6,50	0/1:12,0:13:13.39:13,0,88	1/1:5,13:16:31.91:1262,32,0	1/1:13,6:20:38.94:1360,39,0	1/1:3,3:6:3.01:136,3,0
chr10	79557696	.	CACACACACACAGAGAGAGAGAGAG	C	4446.34	PASS	AB=1.000;AC=17;AF=0.425;AN=40;BaseQRankSum=5.845;DP=328;FS=0.644;HRun=0;HaplotypeScore=210.9465;InbreedingCoeff=0.0034;MQ=44.29;MQ0=10;MQRankSum=-5.826;QD=31.99;ReadPosRankSum=2.915;VQSLOD=3.6401;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,6:19:22.61:1078,23,0	0/1:4,0:4:50.27:75,0,50	0/0:17,0:11:33.11:0,33,1262	0/0:14,0:10:30.10:0,30,1188	./.	0/0:20,0:20:46.98:0,47,3014	0/0:22,0:21:39.13:0,39,2127	1/1:10,0:10:21.07:544,21,0	0/0:13,0:13:21.07:0,21,1464	0/1:7,0:6:99:262,0,103	./.	0/1:13,0:13:99:222,0,247	0/1:7,0:7:44.07:158,0,44	0/1:8,0:8:48.66:187,0,49	./.	1/1:7,0:7:8.24:140,8,0	0/0:32,0:32:81.75:0,82,6474	./.	0/1:10,0:10:99:363,0,266	./.	./.	./.	./.	1/1:14,0:13:2.99:24,3,0	0/1:11,0:11:99:275,0,122	0/1:14,0:12:94.06:529,0,94	0/1:14,0:13:81.65:589,0,82	0/0:3,0:3:0.47:0,0,1
chr10	79557778	.	GACAGACACACGCAC	G	1097.88	PASS	AB=0.962;AC=5;AF=0.089;AN=56;BaseQRankSum=6.074;DP=588;FS=6.202;HRun=0;HaplotypeScore=226.6071;InbreedingCoeff=0.7591;MQ=71.93;MQ0=4;MQRankSum=-5.395;QD=19.96;ReadPosRankSum=-1.384;VQSLOD=1.6680;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,14:22:18.38:581,18,0	0/0:5,0:5:12.04:0,12,836	0/0:36,0:30:79.10:0,79,3795	0/0:40,0:35:85.21:0,85,4337	0/0:23,0:23:66.23:0,66,4282	0/0:22,0:22:59.79:0,60,3869	0/0:27,0:27:69.71:0,70,4616	0/0:32,0:31:63.20:0,63,3757	0/0:12,0:12:30.10:0,30,1936	0/0:17,0:17:51.18:0,51,3069	0/0:16,0:17:45.15:0,45,2896	0/0:22,0:22:51.18:0,51,3422	0/0:12,0:12:36.11:0,36,1990	0/0:15,0:15:39.13:0,39,2547	0/0:20,0:20:42.13:0,42,2745	0/0:19,0:19:48.16:0,48,2820	0/0:40,0:40:99:0,106,6914	0/0:10,0:9:27.09:0,27,1535	0/0:20,0:20:60.21:0,60,3865	0/0:31,0:31:87.77:0,88,5351	0/0:24,0:24:48.16:0,48,3093	0/0:25,0:25:72.72:0,73,4829	0/0:9,0:9:27.08:0,27,1632	0/0:25,0:25:54.66:0,55,3485	1/1:1,7:8:16.30:594,16,0	0/1:24,1:25:49.72:50,0,4267	0/0:17,0:17:51.18:0,51,3327	0/0:11,0:11:30.10:0,30,1797
chr10	79557958	.	TA	T	6442.19	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=6.453;DP=523;FS=1.943;HRun=9;HaplotypeScore=66.8394;InbreedingCoeff=0.9891;MQ=73.23;MQ0=0;MQRankSum=0.872;QD=23.43;ReadPosRankSum=0.835;VQSLOD=5.7656;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:26:32.70:0,33,620	1/1:0,12:12:36.02:329,36,0	0/0:15,0:16:24.82:0,25,334	0/0:6,0:6:15.04:0,15,169	1/1:4,16:20:45.02:412,45,0	0/0:23,0:23:60.18:0,60,692	0/0:13,0:13:36.11:0,36,415	1/1:6,20:26:59.77:516,60,0	0/0:16,0:16:33.10:0,33,380	1/1:2,13:15:39.02:357,39,0	1/1:3,24:27:68.96:620,69,0	0/0:20,0:20:54.08:0,54,587	0/0:14,0:14:39.12:0,39,450	0/0:19,0:19:54.16:0,54,623	1/1:1,16:17:42.02:384,42,0	1/1:1,12:13:30.02:275,30,0	0/0:22,0:22:60.18:0,60,692	1/1:0,13:13:36.02:329,36,0	1/1:3,20:23:59.94:529,60,0	1/1:2,27:29:78.03:714,78,0	1/1:0,3:3:9:82,9,0	0/0:15,0:15:42.12:0,42,484	0/0:23,0:23:66.18:0,66,747	0/0:10,0:10:24.07:0,24,277	0/0:25,0:25:75.22:0,75,866	1/1:1,18:18:51.03:467,51,0	1/1:5,34:39:99:906,99,0	1/1:0,19:19:57.03:522,57,0
chr10	79558298	.	AT	A	6193.47	PASS	AB=0.786;AC=28;AF=0.500;AN=56;BaseQRankSum=11.592;DP=501;FS=9.158;HRun=10;HaplotypeScore=57.2236;InbreedingCoeff=0.9052;MQ=80.68;MQ0=0;MQRankSum=-2.625;QD=22.36;ReadPosRankSum=-0.572;VQSLOD=5.2723;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.10:0,48,517	1/1:1,5:6:18:156,18,0	0/1:14,0:14:1.20:1,0,84	0/0:16,0:14:25.55:0,26,231	1/1:2,25:27:74.91:639,75,0	0/0:23,0:23:66.16:0,66,721	0/0:11,0:11:27.05:0,27,285	1/1:1,26:27:74.97:648,75,0	0/0:13,1:14:16.06:0,16,405	1/1:3,16:19:53.96:465,54,0	1/1:1,30:31:80.96:703,81,0	0/0:15,0:15:24.57:0,25,442	0/0:19,0:19:57.14:0,57,622	0/0:11,0:11:33.09:0,33,365	1/1:1,13:14:41.98:361,42,0	1/1:1,18:19:56.99:495,57,0	0/0:21,0:21:51.09:0,51,542	0/1:3,9:12:3.16:204,0,3	1/1:3,14:17:47.98:414,48,0	1/1:5,18:23:53.98:469,54,0	1/1:1,13:14:38.99:339,39,0	0/0:15,1:16:14.86:0,15,394	0/0:21,1:22:40.14:0,40,669	0/0:12,0:12:30:0,30,315	0/0:25,0:25:49.31:0,49,609	1/1:2,29:31:86.90:741,87,0	1/1:1,11:14:40.07:324,40,0	1/1:0,9:9:26.99:234,27,0
chr10	79558726	.	GGTGTGTGTGTGTGTGTGTGTGT	G	10431.50	PASS	AB=0.864;AC=23;AF=0.442;AN=52;BaseQRankSum=7.701;DP=650;FS=22.612;HRun=0;HaplotypeScore=307.4124;InbreedingCoeff=0.7588;MQ=70.94;MQ0=14;MQRankSum=-4.313;QD=35.36;ReadPosRankSum=-0.381;VQSLOD=2.4253;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:42:24.41:0,24,1671	1/1:5,10:14:12.04:693,12,0	./.	0/0:32,0:24:5.36:0,5,33	1/1:13,10:23:17.90:427,18,0	0/0:17,0:21:24.22:0,24,1394	0/0:20,0:20:12.04:0,12,858	0/1:30,0:30:6.28:60,0,6	0/0:15,0:14:15.52:0,16,966	1/1:14,16:30:36.59:1090,37,0	1/1:7,12:20:15.05:847,15,0	0/0:26,0:29:51.18:0,51,2416	0/0:9,0:11:18.06:0,18,977	0/0:16,0:17:24.07:0,24,1068	1/1:7,16:23:15.94:869,16,0	1/1:15,16:31:21.07:1213,21,0	0/0:16,0:19:30.07:0,30,2373	0/1:4,0:5:1.39:81,0,1	1/1:15,9:24:21.09:1015,21,0	1/1:7,12:19:17.85:727,18,0	./.	0/0:15,0:16:12.04:0,12,645	0/0:10,0:14:7.27:0,7,362	0/0:18,0:26:19.89:0,20,727	0/0:17,0:24:32.31:0,32,1106	1/1:17,15:32:23.11:1210,23,0	1/1:8,20:29:30.10:1694,30,0	0/1:4,9:13:22.84:505,0,23
chr10	79561597	.	CA	C	6978.27	PASS	AB=0.750;AC=32;AF=0.571;AN=56;BaseQRankSum=-2.446;DP=637;FS=0.677;HRun=11;HaplotypeScore=83.6427;InbreedingCoeff=0.8281;MQ=76.42;MQ0=0;MQRankSum=-2.735;QD=17.85;ReadPosRankSum=0.971;VQSLOD=5.6650;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:38.95:320,39,0	1/1:0,14:15:35:277,35,0	0/1:15,1:16:34.55:35,0,108	0/0:15,0:14:4.51:0,5,137	1/1:7,21:29:61.94:499,62,0	0/0:40,2:43:58.97:0,59,1030	0/0:16,0:16:48.12:0,48,512	1/1:10,25:35:77.84:634,78,0	0/0:26,1:27:50.53:0,51,736	1/1:1,27:28:80.91:665,81,0	1/1:0,18:20:55:430,55,0	0/0:0,0:13:31.28:0,31,157	0/0:4,0:30:66.68:0,67,357	0/0:6,0:23:45.82:0,46,252	1/1:7,24:31:71.86:591,72,0	1/1:1,20:22:55.98:449,56,0	0/0:15,1:16:17.47:0,17,391	1/1:4,7:11:17.94:148,18,0	0/1:5,10:15:28.23:199,0,28	1/1:3,23:26:56.90:468,57,0	1/1:2,19:21:56.93:468,57,0	0/0:3,0:27:65.73:0,66,352	0/0:3,0:21:39.77:0,40,199	0/0:4,0:15:28.44:0,28,143	1/1:7,19:26:12.31:417,12,0	1/1:6,22:29:38.95:516,39,0	1/1:6,26:32:48.60:543,49,0	1/1:1,15:16:38.96:320,39,0
chr10	79562032	.	T	TA	8459.59	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-8.168;DP=390;FS=10.644;HRun=7;HaplotypeScore=42.9211;InbreedingCoeff=0.9832;MQ=84.10;MQ0=0;MQRankSum=-1.765;QD=30.21;ReadPosRankSum=0.898;VQSLOD=4.5709;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:33.05:0,33,319	1/1:0,4:4:12.03:139,12,0	0/0:9,0:9:18.02:0,18,173	0/0:16,0:16:39.02:0,39,367	1/1:3,22:25:66.16:781,66,0	0/0:19,0:19:54.07:0,54,516	0/0:8,0:8:18.02:0,18,174	1/1:1,17:18:48.10:543,48,0	0/0:10,0:10:30.05:0,30,290	1/1:2,12:14:36.11:433,36,0	1/1:5,21:26:57.09:656,57,0	1/1:1,7:8:21.06:254,21,0	1/1:1,11:12:36.11:429,36,0	1/1:2,15:17:45.14:544,45,0	1/1:1,7:8:21.06:254,21,0	1/1:0,7:7:18.06:217,18,0	0/0:17,0:17:45.07:0,45,434	1/1:4,11:15:19.59:399,20,0	1/1:3,16:19:48.15:580,48,0	1/1:0,21:21:63.12:729,63,0	1/1:0,10:10:30.09:362,30,0	1/1:0,11:11:30.09:362,30,0	1/1:1,9:10:27.08:326,27,0	1/1:2,6:8:15.04:178,15,0	0/0:18,0:18:54.09:0,54,521	1/1:5,10:15:33.06:382,33,0	1/1:5,15:20:16.14:460,16,0	1/1:0,12:12:36.11:431,36,0
chr10	79562096	.	TTATA	T	6131.90	PASS	AB=1.000;AC=45;AF=0.833;AN=54;BaseQRankSum=2.227;DP=267;FS=3.125;HRun=0;HaplotypeScore=62.5746;InbreedingCoeff=0.6394;MQ=74.68;MQ0=2;MQRankSum=-1.178;QD=26.43;ReadPosRankSum=0.857;VQSLOD=4.3785;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:20.05:101,20,0	1/1:2,1:3:6.02:102,6,0	0/0:7,0:4:9:0,9,114	0/1:18,0:11:2.76:3,0,24	1/1:5,5:10:21.05:305,21,0	0/0:12,0:12:27.09:0,27,639	./.	1/1:15,24:39:72.18:1054,72,0	0/0:4,0:4:6:0,6,99	1/1:5,4:9:18.06:301,18,0	1/1:4,4:9:3.25:238,3,0	1/1:5,0:5:6.02:102,6,0	1/1:8,0:8:18.04:254,18,0	1/1:10,0:10:15.05:252,15,0	1/1:0,2:2:6.02:102,6,0	1/1:1,1:2:3.01:51,3,0	0/0:9,0:9:15.05:0,15,298	1/1:5,4:9:15.05:254,15,0	1/1:9,6:15:23.09:335,23,0	1/1:6,6:12:21.07:354,21,0	1/1:3,1:4:6.02:102,6,0	1/1:3,0:3:3.01:51,3,0	1/1:5,0:5:12.04:189,12,0	1/1:3,0:3:6.02:92,6,0	1/1:13,0:13:23.44:118,23,0	1/1:1,5:6:15.05:254,15,0	1/1:7,7:14:27.09:458,27,0	1/1:6,18:24:63.22:1061,63,0
chr10	79562109	.	TATA	T	2098.03	PASS	AB=0.917;AC=32;AF=0.571;AN=56;BaseQRankSum=7.867;DP=226;FS=0.551;HRun=0;HaplotypeScore=59.4749;InbreedingCoeff=-0.0881;MQ=73.65;MQ0=2;MQRankSum=-5.053;QD=10.54;ReadPosRankSum=8.039;VQSLOD=2.1474;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:10:24.08:404,24,0	1/1:2,0:2:5.49:24,5,0	0/0:6,0:3:9.03:0,9,145	0/1:19,0:11:8.33:8,0,174	0/1:10,0:10:31.64:32,0,74	0/0:10,0:10:30.10:0,30,699	0/0:1,0:1:2.99:0,3,24	0/1:32,0:32:99:111,0,241	0/0:3,0:3:9.03:0,9,159	0/1:7,0:7:19.39:48,0,19	0/1:8,0:8:36.55:37,0,43	1/1:0,0:2:6.02:74,6,0	0/1:5,0:9:16.24:164,0,16	1/1:2,0:6:2.98:149,3,0	0/1:3,0:3:15.41:15,0,29	1/1:1,0:1:2.74:12,3,0	0/0:7,0:7:18.06:0,18,366	0/1:6,0:6:20.82:43,0,21	0/1:10,0:10:43.33:43,0,83	1/1:7,0:7:18.96:81,19,0	0/1:4,0:4:12.87:13,0,14	0/1:1,0:2:8.10:31,0,8	0/1:1,0:5:0.16:108,0,0	1/1:1,0:2:6.02:76,6,0	1/1:1,11:12:24.97:425,25,0	0/1:7,0:7:39.96:40,0,55	0/1:11,0:12:41.71:86,0,42	1/1:23,0:23:57.14:245,57,0
chr10	79562111	.	TATA	T	3101.92	PASS	AB=0.907;AC=30;AF=0.556;AN=54;BaseQRankSum=8.047;DP=229;FS=3.459;HRun=0;HaplotypeScore=57.9899;InbreedingCoeff=-0.0345;MQ=75.47;MQ0=2;MQRankSum=-3.675;QD=16.95;ReadPosRankSum=7.264;VQSLOD=2.9010;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:10:24.08:404,24,0	1/1:2,0:2:5.91:37,6,0	0/0:6,0:4:9.03:0,9,142	0/0:18,0:10:13.38:0,13,147	0/1:8,0:9:7.94:152,0,8	0/0:10,0:10:30.10:0,30,649	./.	0/1:30,0:30:99:372,0,121	0/0:4,0:4:12.02:0,12,158	0/1:6,0:7:11.21:151,0,11	0/1:8,0:9:55.18:98,0,55	1/1:0,2:2:6.02:74,6,0	0/1:5,4:9:0.19:165,0,0	1/1:2,4:6:8.38:155,8,0	0/1:4,0:4:25.40:25,0,52	1/1:1,0:1:2.96:19,3,0	0/0:7,0:7:18.05:0,18,321	0/1:6,0:6:14:75,0,14	0/1:11,0:11:63.59:110,0,64	0/1:8,0:8:8.14:104,0,8	0/1:4,0:5:24.57:25,0,31	0/1:1,1:2:2.78:32,0,3	1/1:1,4:5:5.25:114,5,0	0/1:4,1:5:14.83:63,0,15	1/1:11,0:11:24.08:423,24,0	0/1:8,0:8:69.40:69,0,72	0/1:10,0:10:2.15:142,0,2	1/1:22,0:23:62.23:460,62,0
chr10	79562113	.	TA	T	582.72	PASS	AB=0.967;AC=23;AF=0.426;AN=54;BaseQRankSum=5.478;DP=233;FS=0.000;HRun=1;HaplotypeScore=58.4877;InbreedingCoeff=0.1262;MQ=71.61;MQ0=2;MQRankSum=-1.807;QD=3.55;ReadPosRankSum=-0.530;VQSLOD=-0.3082;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:23.43:161,23,0	1/1:2,0:2:5.29:22,5,0	0/0:5,0:2:3.01:0,3,43	0/0:17,0:10:14.73:0,15,145	0/1:7,1:8:8.44:8,0,51	0/0:11,0:11:30.06:0,30,400	./.	0/1:33,0:33:0.36:0,0,323	0/0:4,0:4:12.03:0,12,138	0/1:7,1:8:28.62:29,0,56	0/1:8,1:9:8.68:9,0,76	1/1:2,0:2:5.98:46,6,0	0/1:7,0:7:6.39:64,0,6	1/1:6,0:6:8.09:88,8,0	0/0:4,0:4:7.79:0,8,67	0/0:1,0:1:0.89:0,1,2	0/0:8,0:8:11.99:0,12,221	0/0:6,0:6:7.44:0,7,41	0/1:10,0:10:16.74:17,0,86	0/1:8,0:8:13.70:14,0,29	0/0:5,0:5:8.69:0,9,76	0/1:2,0:2:2.80:18,0,3	1/1:5,0:5:2.77:57,3,0	0/1:6,0:6:12.83:37,0,13	1/1:13,0:13:23.81:138,24,0	0/0:8,0:8:13.45:0,13,105	0/1:11,0:11:10.28:10,0,27	0/1:23,1:24:9.03:31,0,9
chr10	79562556	.	AT	A	245.11	PASS	AB=0.944;AC=3;AF=0.054;AN=56;BaseQRankSum=5.081;DP=534;FS=3.643;HRun=9;HaplotypeScore=50.1037;InbreedingCoeff=0.6375;MQ=77.40;MQ0=0;MQRankSum=0.041;QD=7.66;ReadPosRankSum=0.888;VQSLOD=0.8980;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.60:0,43,485	0/0:6,0:6:18.05:0,18,208	0/1:16,1:16:21.31:21,0,241	0/0:12,0:10:17.92:0,18,164	0/0:24,0:25:69.14:0,69,780	0/0:32,0:32:87.25:0,87,996	0/0:12,0:12:30.09:0,30,346	0/0:32,0:32:84.65:0,85,906	1/1:2,13:15:36.02:329,36,0	0/0:20,0:20:57.17:0,57,658	0/0:12,0:13:35.93:0,36,386	0/0:17,0:17:51.15:0,51,588	0/0:26,0:26:75.21:0,75,857	0/0:16,0:16:45.13:0,45,519	0/0:16,0:16:39.12:0,39,450	0/0:18,0:18:48.14:0,48,554	0/0:12,0:12:30.08:0,30,337	0/0:13,0:13:39.12:0,39,448	0/0:27,1:28:41.74:0,42,734	0/0:29,0:29:78.23:0,78,899	0/0:11,0:11:33.10:0,33,381	0/0:18,0:18:54.14:0,54,613	0/0:19,0:19:51.15:0,51,588	0/0:20,0:20:48.13:0,48,544	0/0:21,0:22:56.99:0,57,628	0/0:26,0:26:72.20:0,72,820	0/0:34,0:34:93.25:0,93,1051	0/0:9,0:9:18.05:0,18,208
chr10	79566484	.	TTGTGTG	T	2428.46	PASS	AB=0.670;AC=23;AF=0.411;AN=56;BaseQRankSum=7.146;DP=593;FS=1.351;HRun=0;HaplotypeScore=138.6381;InbreedingCoeff=0.4797;MQ=68.83;MQ0=8;MQRankSum=-2.548;QD=9.13;ReadPosRankSum=1.922;VQSLOD=2.8335;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:37:21.07:0,21,535	0/1:4,1:12:10.61:61,0,11	0/0:31,0:19:6.02:0,6,167	0/0:38,0:29:27.98:0,28,686	0/1:11,1:24:49.47:49,0,84	0/0:26,0:26:51.65:0,52,1562	0/0:21,0:22:39.61:0,40,1227	1/1:15,5:19:15:204,15,0	0/0:9,0:13:9.03:0,9,258	0/1:19,0:27:31.61:33,0,32	0/1:8,1:20:12.28:21,0,12	0/0:18,0:16:8.49:0,8,240	0/0:13,0:12:0:0,0,0	0/0:22,0:21:12.03:0,12,270	1/1:11,1:22:10.09:76,10,0	1/1:4,0:13:6.20:12,6,0	0/0:26,0:28:60.18:0,60,1659	1/1:7,5:12:13.60:252,14,0	1/1:5,3:7:8.53:185,9,0	1/1:11,11:22:17.76:288,18,0	1/1:23,8:30:3.01:62,3,0	0/0:24,0:24:15.05:0,15,418	0/0:18,0:19:9.03:0,9,252	0/0:12,0:14:2.88:0,3,70	0/0:16,0:18:9.02:0,9,149	0/1:11,7:19:18.70:434,0,19	1/1:8,13:22:38.58:693,39,0	1/1:9,4:13:12.04:248,12,0
chr10	79567829	.	TA	T	5787.90	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=7.692;DP=371;FS=4.954;HRun=9;HaplotypeScore=35.1564;InbreedingCoeff=0.9404;MQ=58.04;MQ0=6;MQRankSum=2.445;QD=22.43;ReadPosRankSum=0.711;VQSLOD=5.2499;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,15:19:38.96:357,39,0	1/1:0,3:3:9:82,9,0	0/0:4,0:3:9.03:0,9,101	0/0:1,0:1:3.01:0,3,35	1/1:0,14:14:39.02:357,39,0	0/0:12,0:12:33.10:0,33,381	0/0:6,0:4:12.04:0,12,138	1/1:4,15:17:42.01:384,42,0	0/0:12,0:12:30.09:0,30,346	1/1:2,15:17:45.02:412,45,0	1/1:2,17:19:51.03:467,51,0	0/0:10,0:10:24.96:0,25,279	0/0:12,0:12:33.10:0,33,380	0/0:10,0:10:21.06:0,21,242	1/1:0,12:12:33.02:302,33,0	1/1:2,15:17:19.65:359,20,0	0/0:20,0:19:54.14:0,54,613	1/1:6,15:21:36.01:329,36,0	1/1:3,16:18:45.02:412,45,0	1/1:1,19:20:54.03:494,54,0	1/1:0,7:7:21.01:192,21,0	0/0:8,0:8:21.06:0,21,242	0/0:9,0:9:27.08:0,27,312	0/0:9,0:9:27.08:0,27,311	1/1:5,14:19:7.40:322,7,0	1/1:1,14:15:42.02:384,42,0	1/1:1,9:10:27.01:247,27,0	1/1:1,25:26:75.04:686,75,0
chr10	79570401	.	GTGTT	G	538.65	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=0.940;DP=602;FS=4.966;HRun=0;HaplotypeScore=154.9776;InbreedingCoeff=0.2432;MQ=55.74;MQ0=21;MQRankSum=0.074;QD=4.02;ReadPosRankSum=3.292;VQSLOD=2.1831;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,7:30:30.35:406,30,0	0/0:4,0:3:6.01:0,6,70	0/1:28,0:17:9.01:9,0,288	0/0:25,0:16:34.44:0,34,465	0/0:24,0:23:42.71:0,43,373	0/0:21,0:21:44.07:0,44,721	0/0:29,0:27:65.91:0,66,1104	0/0:36,0:35:95.93:0,96,964	0/0:27,0:26:64.36:0,64,530	0/0:24,0:22:62.74:0,63,633	0/0:11,0:11:26.78:0,27,256	0/1:20,0:20:21.88:22,0,266	0/0:17,0:17:15.29:0,15,322	0/0:19,0:19:30.14:0,30,242	0/0:21,0:21:29.36:0,29,353	0/0:24,0:23:35.98:0,36,244	0/0:23,0:22:33.15:0,33,1078	0/0:10,0:8:7.48:0,7,140	0/0:19,0:15:43.72:0,44,379	0/0:16,0:16:41.15:0,41,327	0/0:27,0:25:65.63:0,66,596	0/0:17,0:17:19.72:0,20,324	0/0:16,0:16:9.76:0,10,275	0/1:28,0:28:3.47:3,0,309	0/1:26,0:25:99:220,0,166	0/0:23,0:21:56.09:0,56,466	0/0:24,0:24:65.92:0,66,646	0/0:11,0:11:11.57:0,12,172
chr10	79570405	.	TTGTG	T	863.17	PASS	AB=0.985;AC=18;AF=0.346;AN=52;BaseQRankSum=2.185;DP=606;FS=0.641;HRun=0;HaplotypeScore=154.2388;InbreedingCoeff=0.0795;MQ=53.53;MQ0=26;MQRankSum=-0.066;QD=2.78;ReadPosRankSum=1.534;VQSLOD=2.6570;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:34:17.91:171,18,0	0/0:3,0:2:4.51:0,5,22	./.	./.	0/0:21,0:20:5.88:0,6,36	0/0:17,0:19:27.49:0,27,502	0/0:29,1:28:41.66:0,42,767	0/0:32,0:31:12.07:0,12,121	0/1:26,0:26:4.21:4,0,41	0/0:24,0:22:10.65:0,11,70	0/1:11,0:11:12.63:13,0,14	1/1:18,1:20:0.58:172,1,0	0/1:19,1:20:63.97:122,0,64	1/1:19,0:19:23.93:141,24,0	0/1:22,0:22:6.74:7,0,46	0/1:24,0:21:0.59:77,0,1	0/0:26,0:25:49.97:0,50,886	0/0:10,0:8:4.74:0,5,16	0/1:19,0:15:9.34:9,0,18	0/1:17,0:16:7.81:8,0,9	0/0:30,0:28:14.78:0,15,105	0/1:17,0:16:64.40:70,0,64	0/1:13,1:14:9.53:67,0,10	0/1:29,0:29:3.08:143,0,3	0/0:27,0:26:22.30:0,22,394	0/1:22,0:18:3.12:3,0,20	0/0:23,0:23:18.77:0,19,109	0/1:12,0:12:5.04:10,0,5
chr10	79570425	.	G	GTA	3102.37	PASS	AB=0.673;AC=23;AF=0.411;AN=56;BaseQRankSum=2.245;DP=540;FS=1.545;HRun=0;HaplotypeScore=118.0847;InbreedingCoeff=0.5798;MQ=45.21;MQ0=53;MQRankSum=0.247;QD=13.91;ReadPosRankSum=-1.224;VQSLOD=2.9569;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:20.66:0,21,189	1/1:2,2:2:6.02:106,6,0	0/0:7,0:1:2.92:0,3,17	0/0:11,0:3:8.99:0,9,97	1/1:5,13:16:6.02:106,6,0	0/0:21,0:21:45.50:0,45,508	0/0:36,0:29:63.47:0,63,737	1/1:10,13:15:38.45:316,38,0	0/0:27,0:22:32.47:0,32,286	0/1:9,10:12:23.99:179,0,24	1/1:8,2:8:8.18:149,8,0	0/0:25,0:25:29.26:0,29,251	0/0:20,0:18:38.69:0,39,339	0/0:22,0:22:35.29:0,35,307	1/1:7,15:19:5.30:330,5,0	1/1:4,20:20:36.12:617,36,0	0/0:29,0:27:73.28:0,73,837	0/1:9,1:8:8.23:110,0,8	0/1:4,5:7:3.67:121,0,4	0/1:3,11:13:4.96:166,0,5	1/1:21,3:20:4.27:149,4,0	0/0:17,0:16:18.02:0,18,196	0/0:11,0:10:11.96:0,12,95	0/0:28,0:28:30.25:0,30,276	0/0:28,0:27:45.01:0,45,477	1/1:4,13:14:29.62:308,30,0	1/1:14,5:19:38.29:495,38,0	0/1:3,5:8:6.99:146,0,7
chr10	79570447	.	G	GGA	719.37	PASS	AB=1.000;AC=19;AF=0.396;AN=48;BaseQRankSum=7.984;DP=451;FS=3.513;HRun=0;HaplotypeScore=141.7038;InbreedingCoeff=0.7251;MQ=39.52;MQ0=64;MQRankSum=-7.220;QD=7.49;ReadPosRankSum=-3.595;VQSLOD=3.0128;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:17.45:0,17,264	1/1:5,0:3:6.01:62,6,0	./.	./.	1/1:8,0:6:3:26,3,0	0/0:21,0:21:51.17:0,51,817	0/0:39,0:33:69.24:0,69,1109	./.	0/0:26,0:21:38.31:0,38,490	./.	1/1:7,1:6:3.01:35,3,0	0/0:29,0:28:21.06:0,21,295	0/0:18,0:16:26.72:0,27,371	0/0:23,0:23:26.93:0,27,337	1/1:16,2:13:11.42:64,11,0	1/1:16,3:15:30.93:272,31,0	0/0:27,0:25:62:0,62,939	0/0:4,0:3:6:0,6,53	0/1:5,0:2:8.41:32,0,8	1/1:7,3:9:3:31,3,0	0/0:19,1:14:2.78:0,3,31	0/0:21,0:20:12.04:0,12,193	0/0:10,0:9:5.91:0,6,52	0/0:26,0:26:17.90:0,18,265	0/0:24,0:22:27.09:0,27,428	1/1:12,0:7:20.79:181,21,0	1/1:3,2:5:11.70:82,12,0	1/1:6,0:6:11.94:110,12,0
chr10	79570461	.	GTA	G	437.41	PASS	AB=0.967;AC=33;AF=0.589;AN=56;BaseQRankSum=6.472;DP=470;FS=0.626;HRun=0;HaplotypeScore=122.3607;InbreedingCoeff=0.2032;MQ=40.24;MQ0=63;MQRankSum=-3.665;QD=1.28;ReadPosRankSum=-2.777;VQSLOD=1.7384;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,1:32:19.83:20,0,84	1/1:5,0:3:3.93:25,4,0	0/0:10,0:6:15.05:0,15,238	0/0:7,0:5:11.92:0,12,224	1/1:8,0:7:6.82:48,7,0	0/0:25,0:25:63.15:0,63,1044	0/0:31,0:26:57.03:0,57,944	0/1:24,0:6:0.99:1,0,11	0/1:30,0:25:55.72:89,0,56	1/1:16,0:8:7.77:44,8,0	1/1:10,0:8:2.98:8,3,0	0/1:28,2:29:13.69:14,0,109	0/1:16,0:14:34.19:35,0,34	0/1:19,3:22:4.77:5,0,61	1/1:16,0:12:8.26:41,8,0	1/1:15,0:11:3.80:44,4,0	0/0:24,0:22:11.02:0,11,807	1/1:7,0:6:8.74:44,9,0	1/1:8,0:3:2.78:24,3,0	1/1:10,0:9:3.42:24,3,0	1/1:20,0:14:10.97:59,11,0	0/0:22,0:21:17.85:0,18,134	0/0:9,1:9:1.45:0,1,47	0/1:25,0:25:29.16:29,0,90	0/1:24,0:22:2.39:2,0,442	0/1:10,1:6:5.57:15,0,6	1/1:5,0:5:2.04:17,2,0	1/1:5,0:5:2.96:19,3,0
chr10	79570473	.	GTA	G	1078.43	PASS	AB=0.966;AC=28;AF=0.500;AN=56;BaseQRankSum=6.381;DP=543;FS=33.051;HRun=0;HaplotypeScore=131.7170;InbreedingCoeff=0.5222;MQ=43.03;MQ0=57;MQRankSum=-3.251;QD=3.84;ReadPosRankSum=-3.639;VQSLOD=-0.2219;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,1:30:5.18:5,0,19	1/1:8,0:6:13.74:98,14,0	0/0:25,0:14:41.70:0,42,497	0/0:26,0:13:19.27:0,19,356	1/1:14,0:13:9.75:79,10,0	0/0:22,0:22:60.15:0,60,1116	0/0:30,0:25:60.05:0,60,944	1/1:33,1:20:44.45:312,44,0	0/0:28,0:25:5.85:0,6,504	1/1:26,0:18:21.07:121,21,0	1/1:13,0:11:9.94:60,10,0	0/1:27,2:28:23.73:24,0,183	0/0:16,0:14:0.34:0,0,58	0/1:21,3:24:15.11:15,0,64	1/1:20,0:16:14.52:94,15,0	0/1:9,0:6:0.30:20,0,0	0/0:24,0:22:53.22:0,53,978	0/1:8,0:7:18.23:57,0,18	1/1:7,0:3:7.76:51,8,0	1/1:12,0:12:14.59:101,15,0	1/1:18,2:16:16.26:117,16,0	0/0:21,0:20:5.37:0,5,107	0/0:15,1:15:8.20:0,8,72	0/0:28,0:28:13.81:0,14,144	0/0:26,0:24:32.27:0,32,530	1/1:14,0:9:6.38:91,6,0	0/1:6,0:6:0.12:0,0,0	1/1:5,0:5:2.44:25,2,0
chr10	79570475	.	ATGTGTGTG	A	2334.65	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=6.602;DP=543;FS=31.969;HRun=0;HaplotypeScore=159.6805;InbreedingCoeff=0.5881;MQ=43.47;MQ0=53;MQRankSum=-2.328;QD=7.14;ReadPosRankSum=-1.248;VQSLOD=0.7786;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,15:29:9.84:74,10,0	1/1:7,0:6:16.92:138,17,0	0/0:26,0:15:45.12:0,45,943	0/0:26,0:13:26.05:0,26,741	1/1:13,0:13:20.81:172,21,0	0/0:21,0:21:57.20:0,57,1959	0/0:31,0:27:63.13:0,63,1889	1/1:34,0:21:24.51:389,25,0	0/0:28,0:25:47.25:0,47,389	1/1:26,0:18:32.93:286,33,0	1/1:13,0:11:26.64:203,27,0	0/1:28,0:27:3.98:95,0,4	0/1:17,0:15:38.28:70,0,38	0/0:23,0:23:1.11:0,1,7	1/1:21,0:17:32.54:249,33,0	1/1:9,0:6:17.66:114,18,0	0/0:24,0:22:60.21:0,60,1861	0/1:8,0:7:2.25:69,0,2	1/1:8,0:4:0.93:55,1,0	1/1:12,0:12:29.65:209,30,0	1/1:20,0:16:12.14:92,12,0	0/0:19,0:18:5.66:0,6,18	0/0:18,0:17:7.32:0,7,23	1/1:27,0:27:2.06:46,2,0	0/1:26,0:24:18.21:18,0,104	1/1:16,0:11:20.76:186,21,0	0/1:6,0:6:0.02:0,0,0	1/1:5,0:5:10.96:60,11,0
chr10	79570479	.	GTGTGTGTATGTA	G	1934.53	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=8.124;DP=560;FS=25.566;HRun=0;HaplotypeScore=186.7985;InbreedingCoeff=0.6334;MQ=46.79;MQ0=49;MQRankSum=-3.272;QD=6.22;ReadPosRankSum=1.163;VQSLOD=1.2049;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:27:7.34:70,7,0	1/1:8,0:7:11.03:100,11,0	0/0:35,0:23:68.68:0,69,942	0/0:29,0:16:40.74:0,41,659	1/1:14,0:14:17.65:114,18,0	0/0:21,0:21:60.19:0,60,1582	0/0:27,0:23:60.10:0,60,1427	0/1:38,0:26:36.03:219,0,36	0/1:27,0:24:24.12:137,0,24	1/1:8,18:19:27.95:299,28,0	1/1:13,0:11:20.57:131,21,0	0/1:28,0:27:34.55:35,0,117	0/1:17,0:15:0.47:0,0,25	0/0:23,0:23:7.08:0,7,46	1/1:22,0:18:30.04:204,30,0	1/1:9,0:7:20.31:128,20,0	0/0:26,0:24:66.10:0,66,1470	1/1:8,0:7:11.76:148,12,0	1/1:8,0:4:2.74:25,3,0	1/1:13,0:13:26.32:164,26,0	1/1:21,0:18:12.17:88,12,0	0/0:19,0:18:14.16:0,14,89	0/0:18,0:17:9.86:0,10,56	0/0:25,0:25:9.43:0,9,79	0/0:26,0:24:29.22:0,29,451	1/1:17,0:13:31.38:209,31,0	1/1:7,0:7:2.13:6,2,0	1/1:6,0:6:8.91:63,9,0
chr10	79570491	.	A	ATGTG	8154.24	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=3.151;DP=584;FS=27.404;HRun=0;HaplotypeScore=126.4654;InbreedingCoeff=0.7349;MQ=55.00;MQ0=16;MQRankSum=-2.069;QD=20.64;ReadPosRankSum=2.301;VQSLOD=3.0054;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:21:9.76:10,0,15	1/1:9,0:8:23.85:330,24,0	0/0:51,0:31:83.33:0,83,1238	0/0:45,0:29:65.95:0,66,993	1/1:18,0:18:35.78:480,36,0	0/0:22,0:22:54.17:0,54,914	0/0:26,0:25:57.16:0,57,942	1/1:36,0:32:72.20:1146,72,0	0/0:23,0:22:45:0,45,729	1/1:20,0:19:50.69:658,51,0	1/1:13,0:12:33.07:433,33,0	1/1:4,24:28:21.07:507,21,0	1/1:1,11:12:9.03:232,9,0	1/1:3,17:22:2.90:77,3,0	1/1:18,0:17:39.11:557,39,0	1/1:15,0:13:30.04:340,30,0	0/0:22,0:21:53.93:0,54,827	0/1:6,0:6:5.47:136,0,5	1/1:11,0:9:27.06:363,27,0	1/1:16,0:16:39.09:513,39,0	1/1:21,0:20:16.93:254,17,0	1/1:3,18:21:6.02:155,6,0	1/1:1,19:20:2.94:77,3,0	1/1:1,24:27:9.03:232,9,0	1/1:0,26:26:30.09:774,30,0	1/1:15,0:14:38.64:550,39,0	1/1:11,0:11:8.74:94,9,0	1/1:7,0:7:18.03:236,18,0
chr10	79570496	.	T	TGTGT	8150.28	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=3.301;DP=602;FS=24.280;HRun=0;HaplotypeScore=130.4025;InbreedingCoeff=0.8123;MQ=55.39;MQ0=15;MQRankSum=-1.726;QD=20.07;ReadPosRankSum=3.658;VQSLOD=2.8406;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:22:3.02:13,0,3	1/1:9,0:8:23.85:330,24,0	0/0:56,0:33:83.33:0,83,1238	0/0:48,0:32:65.95:0,66,993	1/1:18,0:18:35.78:480,36,0	0/0:22,0:22:54.17:0,54,914	0/0:24,0:23:57.16:0,57,942	1/1:38,0:35:72.20:1146,72,0	0/0:21,0:21:43.30:0,43,726	1/1:19,0:20:50.69:658,51,0	1/1:13,0:12:33.07:433,33,0	1/1:28,0:28:21.07:507,21,0	1/1:12,0:12:9.03:232,9,0	1/1:23,0:23:2.90:77,3,0	1/1:19,0:18:39.11:557,39,0	1/1:15,0:14:30.04:340,30,0	0/0:22,0:21:53.93:0,54,827	1/1:6,0:6:8.34:145,8,0	1/1:10,0:9:27.05:341,27,0	1/1:19,0:19:39.09:513,39,0	1/1:21,0:20:16.93:254,17,0	1/1:23,0:22:8.06:160,8,0	1/1:21,0:21:2.94:77,3,0	1/1:27,0:27:9.03:232,9,0	1/1:26,0:26:30.09:774,30,0	1/1:15,0:14:38.64:550,39,0	1/1:2,8:11:8.74:94,9,0	1/1:9,0:9:18.03:236,18,0
chr10	79571275	.	T	TG	6413.43	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-13.344;DP=596;FS=5.550;HRun=0;HaplotypeScore=56.5990;InbreedingCoeff=0.9969;MQ=93.60;MQ0=0;MQRankSum=-2.473;QD=43.04;ReadPosRankSum=2.875;VQSLOD=5.4889;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:72.25:1151,72,0	0/0:9,0:9:27.09:0,27,377	0/0:28,0:28:75.17:0,75,987	0/0:23,0:23:62.26:0,62,797	0/0:23,0:23:63.21:0,63,881	0/0:30,0:30:84.28:0,84,1174	0/0:18,0:18:54.18:0,54,754	0/0:33,0:33:68.32:0,68,1259	0/0:21,0:21:63.18:0,63,845	0/0:22,0:22:66.22:0,66,923	0/0:18,0:18:54.16:0,54,723	1/1:0,13:13:36.12:564,36,0	1/1:0,22:22:63.21:1007,63,0	1/1:0,17:17:45.15:719,45,0	0/0:25,0:25:75.24:0,75,1033	0/0:26,0:26:78.26:0,78,1090	0/0:9,0:9:27.09:0,27,377	0/0:14,0:14:42.14:0,42,585	0/0:17,0:17:51.17:0,51,709	0/0:24,0:24:72.24:0,72,1007	0/0:24,0:24:69.23:0,69,963	1/1:0,15:15:33.11:527,33,0	1/1:1,18:19:54.18:863,54,0	1/1:0,21:21:63.21:1007,63,0	1/1:0,15:15:36.12:575,36,0	0/0:35,0:35:99:0,102,1398	0/0:43,0:43:99:0,129,1765	0/0:5,0:5:15.05:0,15,210
chr10	79572508	.	TA	T	3471.90	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.618;DP=727;FS=0.400;HRun=1;HaplotypeScore=100.4861;InbreedingCoeff=0.9782;MQ=51.60;MQ0=47;MQRankSum=-12.669;QD=21.43;ReadPosRankSum=-0.846;VQSLOD=3.4106;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:20:41.83:437,42,0	0/0:11,0:11:30.10:0,30,479	0/0:22,0:7:18.02:0,18,234	0/0:25,0:12:34.32:0,34,479	0/0:23,0:23:47.82:0,48,718	0/0:28,0:26:69.22:0,69,1080	0/0:30,0:28:78.27:0,78,1243	0/0:34,0:24:72.23:0,72,1121	0/0:35,0:35:99:0,99,1556	0/0:31,0:29:87.30:0,87,1390	0/0:25,0:24:63.17:0,63,961	1/1:2,41:30:78.09:900,78,0	1/1:1,24:20:60.18:727,60,0	1/1:1,27:18:54.17:656,54,0	0/0:45,0:45:99:0,126,1991	0/0:47,0:45:99:0,132,2106	0/0:31,0:29:78.27:0,78,1242	0/0:28,0:28:81.28:0,81,1294	0/0:17,0:14:33.10:0,33,507	0/0:24,0:21:60.20:0,60,959	0/0:55,0:54:99:0,150,2363	1/1:1,8:5:12.04:148,12,0	1/1:1,15:8:15.05:181,15,0	1/1:1,7:7:17.99:200,18,0	1/1:0,10:8:18.06:223,18,0	0/0:27,0:25:75.23:0,75,1155	0/0:24,0:24:66.18:0,66,982	0/0:3,0:3:9.03:0,9,144
chr10	79573988	.	TTGTGTGTG	T	1155.49	PASS	AB=0.776;AC=12;AF=0.222;AN=54;BaseQRankSum=5.590;DP=633;FS=1.955;HRun=0;HaplotypeScore=148.1727;InbreedingCoeff=0.6451;MQ=60.20;MQ0=19;MQRankSum=-6.220;QD=7.05;ReadPosRankSum=-0.282;VQSLOD=2.5192;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,12:35:73.07:164,0,73	0/0:6,0:5:3.01:0,3,81	./.	0/0:31,0:15:0:0,0,0	0/0:15,0:23:15.74:0,16,471	0/0:20,0:20:32.55:0,33,936	0/0:24,0:24:20.21:0,20,576	0/0:26,0:25:15.05:0,15,321	0/0:13,0:13:24.08:0,24,752	0/0:23,0:21:33.07:0,33,811	0/0:19,0:19:15.04:0,15,228	1/1:14,7:23:24.08:542,24,0	1/1:16,5:21:8.62:223,9,0	1/1:16,7:23:6.02:132,6,0	0/0:19,0:23:24.08:0,24,600	0/0:10,0:15:12.04:0,12,345	0/0:35,0:36:45.14:0,45,1322	0/0:11,0:17:15.05:0,15,461	0/0:16,0:14:12.04:0,12,396	0/0:15,0:23:11.07:0,11,287	0/0:22,0:35:18.06:0,18,468	0/1:16,5:21:1.97:69,0,2	1/1:16,4:20:3.01:56,3,0	1/1:15,5:19:6.02:125,6,0	0/0:20,0:18:24.08:0,24,510	0/0:22,0:21:38.33:0,38,858	0/0:21,0:23:21.07:0,21,623	0/0:13,0:19:12.04:0,12,359
chr10	79575198	.	T	TCATA	2505.49	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=10.512;DP=392;FS=12.083;HRun=0;HaplotypeScore=95.0992;InbreedingCoeff=0.7820;MQ=74.75;MQ0=0;MQRankSum=-5.529;QD=22.57;ReadPosRankSum=2.130;VQSLOD=2.7590;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:17.14:108,17,0	0/0:7,0:7:15.05:0,15,245	0/0:17,0:17:3.01:0,3,49	0/0:12,0:8:2.97:0,3,20	0/0:14,0:14:33.08:0,33,490	0/0:23,0:23:45.14:0,45,707	0/0:9,0:9:15.05:0,15,237	0/0:39,0:39:54.16:0,54,833	0/0:8,0:8:12.04:0,12,196	0/0:17,0:17:27.09:0,27,421	0/0:12,0:12:24.05:0,24,344	1/1:8,0:8:12.04:248,12,0	0/1:21,0:21:15.61:580,0,16	1/1:13,0:13:21.07:440,21,0	0/0:13,0:13:24.08:0,24,392	0/0:14,0:14:27.08:0,27,417	0/0:9,0:9:18.06:0,18,293	0/0:7,0:7:15.05:0,15,245	0/0:20,0:20:36.11:0,36,551	0/0:11,0:11:24.07:0,24,368	0/0:2,0:2:6.02:0,6,98	1/1:9,0:9:21.07:432,21,0	1/1:14,1:15:27.09:511,27,0	1/1:4,3:7:3.01:52,3,0	1/1:21,0:21:43.30:324,43,0	0/0:17,0:17:27.08:0,27,415	0/0:15,0:15:21.05:0,21,318	0/0:15,0:15:33.11:0,33,539
chr10	79575221	.	T	TAC	2015.77	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=11.090;DP=339;FS=27.961;HRun=0;HaplotypeScore=79.1824;InbreedingCoeff=0.8076;MQ=59.72;MQ0=0;MQRankSum=-4.203;QD=18.33;ReadPosRankSum=1.748;VQSLOD=1.3883;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,3:16:16.03:84,16,0	0/0:6,0:6:18.06:0,18,275	0/0:14,0:6:5.78:0,6,91	0/1:15,0:5:0.58:3,0,1	0/0:13,0:13:39.10:0,39,553	0/0:19,0:19:54.17:0,54,802	0/0:6,0:6:15.05:0,15,228	0/0:31,0:31:93.29:0,93,1359	0/0:5,0:5:15.05:0,15,229	0/0:11,0:11:30.10:0,30,459	0/0:11,0:11:33.07:0,33,435	1/1:8,0:8:12.04:226,12,0	0/1:17,0:17:11.12:364,0,11	1/1:9,0:9:21.07:373,21,0	0/0:11,0:11:33.08:0,33,463	0/0:11,0:11:33.10:0,33,484	0/0:13,0:13:36.09:0,36,505	0/0:9,0:9:15.05:0,15,230	0/0:15,0:15:43.39:0,43,645	0/0:10,0:10:30.09:0,30,438	0/0:3,0:3:9.03:0,9,137	1/1:7,0:7:21.04:362,21,0	1/1:10,0:10:26.98:417,27,0	1/1:4,0:4:3.01:57,3,0	1/1:20,4:24:35.77:319,36,0	0/0:14,0:14:39.11:0,39,555	0/0:10,0:10:24.06:0,24,345	0/0:17,0:17:48.16:0,48,733
chr10	79575222	.	AT	A	932.16	PASS	AB=0.944;AC=15;AF=0.268;AN=56;BaseQRankSum=10.819;DP=336;FS=18.269;HRun=1;HaplotypeScore=77.4928;InbreedingCoeff=0.7986;MQ=61.34;MQ0=0;MQRankSum=-5.645;QD=10.13;ReadPosRankSum=2.928;VQSLOD=0.1572;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,5:15:11.92:148,12,0	0/0:6,0:6:18.06:0,18,288	0/0:14,0:6:8.68:0,9,119	0/0:17,0:7:3.05:0,3,17	0/0:13,0:13:39.10:0,39,576	0/0:19,0:19:57.16:0,57,863	0/0:5,0:5:15.05:0,15,237	0/0:32,0:32:96.30:0,96,1468	0/0:5,0:5:15.05:0,15,240	0/0:10,0:10:30.10:0,30,480	0/0:11,0:11:33.08:0,33,468	1/1:8,0:8:9.11:41,9,0	0/1:16,1:17:4.87:113,0,5	1/1:8,1:9:19.89:143,20,0	0/0:11,0:11:33.11:0,33,527	0/0:11,0:11:33.10:0,33,504	0/0:14,0:14:36.12:0,36,574	0/0:9,0:9:21.03:0,21,296	0/0:15,0:15:42.61:0,43,671	0/0:10,0:10:30.09:0,30,456	0/0:3,0:3:9.03:0,9,144	1/1:6,1:7:4:52,4,0	1/1:8,2:10:24.56:170,25,0	1/1:4,0:4:2.22:7,2,0	1/1:13,9:22:36.11:438,36,0	0/0:13,0:13:39.12:0,39,598	0/0:9,0:9:27.06:0,27,383	0/0:17,0:17:48.16:0,48,767
chr10	79575224	.	A	AT	1120.66	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.774;DP=327;FS=20.219;HRun=1;HaplotypeScore=75.8664;InbreedingCoeff=0.9147;MQ=61.17;MQ0=0;MQRankSum=-5.475;QD=13.18;ReadPosRankSum=1.781;VQSLOD=1.3030;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:12:9.25:39,9,0	0/0:6,0:6:18.06:0,18,250	0/0:15,0:6:8.65:0,9,101	0/0:18,0:7:12.38:0,12,66	0/0:11,0:11:33.11:0,33,458	0/0:18,0:18:54.18:0,54,751	0/0:5,0:5:15.04:0,15,194	0/0:33,0:33:93.30:0,93,1254	0/0:5,0:5:15.05:0,15,210	0/0:10,0:10:30.10:0,30,416	0/0:9,0:9:27.09:0,27,372	1/1:0,5:8:11.79:131,12,0	1/1:3,9:15:12.08:246,12,0	1/1:2,6:9:20.89:256,21,0	0/0:12,0:12:33.11:0,33,450	0/0:10,0:10:30.10:0,30,416	0/0:15,0:15:42.08:0,42,541	0/0:9,0:9:21.07:0,21,286	0/0:15,0:15:37.84:0,38,561	0/0:9,0:9:27.09:0,27,372	0/0:3,0:3:9.03:0,9,126	1/1:1,6:7:19.29:207,19,0	1/1:3,5:10:27.07:306,27,0	1/1:1,1:2:3:29,3,0	1/1:9,0:22:23.36:102,23,0	0/0:12,0:12:36.11:0,36,485	0/0:9,0:9:24.08:0,24,331	0/0:18,0:18:48.16:0,48,671
chr10	79575226	.	T	TA	854.07	PASS	AB=0.832;AC=14;AF=0.250;AN=56;BaseQRankSum=8.692;DP=329;FS=30.544;HRun=2;HaplotypeScore=78.0849;InbreedingCoeff=0.6387;MQ=62.70;MQ0=0;MQRankSum=-3.825;QD=10.17;ReadPosRankSum=-1.464;VQSLOD=-0.2702;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:13:13.70:42,0,14	0/0:7,0:7:18.06:0,18,233	0/0:16,0:7:6.33:0,6,73	0/0:18,0:7:11.61:0,12,80	0/0:11,0:11:33.11:0,33,427	0/0:18,0:18:54.18:0,54,700	0/0:5,0:5:12.04:0,12,156	0/0:34,0:34:96.30:0,96,1225	0/0:5,0:5:15.05:0,15,195	0/0:11,0:11:33.09:0,33,403	0/0:9,0:9:24.08:0,24,311	1/1:3,5:8:20.90:179,21,0	1/1:4,9:13:1.28:157,1,0	1/1:2,6:8:20.93:208,21,0	0/0:11,0:11:33.09:0,33,412	0/0:10,0:10:30.10:0,30,388	0/0:15,0:15:42.11:0,42,517	0/0:9,0:9:21.07:0,21,272	0/0:15,0:15:36.59:0,37,467	0/0:10,0:10:21.07:0,21,271	0/0:3,0:3:9.03:0,9,117	1/1:1,6:7:18.04:186,18,0	1/1:5,5:10:1.34:157,1,0	1/1:1,1:2:3:27,3,0	0/1:19,0:23:65.80:66,0,196	0/0:11,0:11:33.11:0,33,429	0/0:9,0:9:27.09:0,27,343	0/0:18,0:18:54.17:0,54,697
chr10	79575231	.	A	AATATG	2059.20	PASS	AB=0.901;AC=16;AF=0.286;AN=56;BaseQRankSum=11.021;DP=324;FS=21.255;HRun=0;HaplotypeScore=95.3553;InbreedingCoeff=0.6240;MQ=63.78;MQ0=0;MQRankSum=-6.716;QD=17.16;ReadPosRankSum=-3.249;VQSLOD=1.0546;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,3:13:23.50:240,0,24	0/0:7,0:7:21.06:0,21,422	0/1:15,0:6:29.73:30,0,61	0/1:22,0:10:1.98:2,0,90	0/0:12,0:12:36.09:0,36,725	0/0:20,0:20:60.17:0,60,1273	0/0:5,0:5:15.04:0,15,304	0/0:33,0:33:96.29:0,96,1937	0/0:5,0:5:15.05:0,15,349	0/0:10,0:10:30.10:0,30,642	0/0:7,0:7:21.07:0,21,487	1/1:8,0:8:24.01:330,24,0	1/1:14,0:14:16.58:326,17,0	1/1:7,0:7:21.07:349,21,0	0/0:10,0:10:30.09:0,30,604	0/0:10,0:10:30.09:0,30,631	0/0:14,0:14:39.13:0,39,866	0/0:9,0:9:24.04:0,24,495	0/0:14,0:14:39.11:0,39,781	0/0:7,0:7:21.06:0,21,444	0/0:3,0:3:9.03:0,9,209	1/1:7,0:7:21.04:312,21,0	1/1:8,0:8:18.05:274,18,0	1/1:2,0:2:3.01:42,3,0	0/1:19,4:23:82.08:340,0,82	0/0:12,0:12:36.11:0,36,795	0/0:8,0:8:24.08:0,24,515	0/0:18,0:18:54.19:0,54,1228
chr10	79575264	.	T	TAC	84.35	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=8.710;DP=308;FS=4.488;HRun=0;HaplotypeScore=73.8390;InbreedingCoeff=0.6792;MQ=66.86;MQ0=1;MQRankSum=-5.593;QD=1.51;ReadPosRankSum=-0.476;VQSLOD=1.3459;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:2.18:7,2,0	0/0:3,0:3:9.03:0,9,135	0/0:14,0:7:0:0,0,72	0/0:17,0:8:5.65:0,6,67	0/0:14,0:14:39.11:0,39,572	0/0:18,0:18:54.17:0,54,797	0/0:7,0:7:21.07:0,21,320	0/0:32,0:32:93.30:0,93,1382	0/0:3,0:3:8.98:0,9,73	0/0:15,0:15:45.15:0,45,686	0/0:11,0:11:33.10:0,33,484	1/1:6,1:7:11.08:49,11,0	1/1:8,1:9:11.24:56,11,0	1/1:7,2:9:8.60:71,9,0	0/0:8,0:8:24.07:0,24,343	0/0:7,0:7:21.07:0,21,321	0/0:16,0:16:45.15:0,45,688	0/0:15,0:15:39.08:0,39,548	0/0:17,0:17:48.16:0,48,734	0/0:11,0:11:30.10:0,30,457	./.	0/0:2,0:2:3.01:0,3,44	0/1:5,0:5:7.06:7,0,18	1/1:2,0:2:2.98:22,3,0	1/1:16,0:16:10.89:29,11,0	0/0:15,0:15:45.14:0,45,668	0/0:6,0:5:15.05:0,15,229	0/0:21,0:21:63.21:0,63,952
chr10	79575266	.	TAC	T	81.42	PASS	AB=0.842;AC=6;AF=0.111;AN=54;BaseQRankSum=4.783;DP=305;FS=0.000;HRun=0;HaplotypeScore=68.7592;InbreedingCoeff=0.0499;MQ=67.31;MQ0=1;MQRankSum=-0.236;QD=1.94;ReadPosRankSum=-4.646;VQSLOD=-0.2344;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:5.69:0,6,38	0/0:3,0:3:9.03:0,9,173	0/1:13,0:7:11.19:11,0,83	0/0:16,0:8:8.96:0,9,90	0/0:14,0:14:42.08:0,42,664	0/0:17,0:17:51.13:0,51,883	0/0:7,0:7:21.04:0,21,338	0/0:32,0:32:90.17:0,90,1401	0/0:3,0:3:6.01:0,6,61	0/0:15,0:15:45.13:0,45,750	0/0:12,0:12:36.09:0,36,609	0/1:6,3:9:32:32,0,70	0/1:7,2:9:49.15:49,0,51	0/1:6,2:8:32.05:59,0,32	0/0:9,0:9:27.06:0,27,441	0/0:7,0:7:21.07:0,21,405	0/0:16,0:16:45.15:0,45,866	0/0:14,0:14:36.12:0,36,674	0/0:17,0:17:51.15:0,51,881	0/0:11,0:11:33.08:0,33,565	./.	0/0:2,0:2:3:0,3,25	0/0:3,1:4:2.98:0,3,22	1/1:2,0:2:3.01:46,3,0	0/0:13,1:14:0:0,0,164	0/0:16,0:16:48.14:0,48,863	0/0:6,0:5:18.01:0,18,307	0/0:21,0:21:63.16:0,63,1108
chr10	79575268	.	C	CATACATACATAT	2241.85	PASS	AB=1.000;AC=15;AF=0.288;AN=52;BaseQRankSum=3.696;DP=298;FS=0.000;HRun=0;HaplotypeScore=116.6426;InbreedingCoeff=0.7601;MQ=67.73;MQ0=1;MQRankSum=-4.488;QD=33.46;ReadPosRankSum=-0.423;VQSLOD=2.8524;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:7:3.01:36,3,0	0/0:3,0:3:9.03:0,9,283	0/1:14,0:7:8.21:8,0,89	0/0:15,0:8:8.05:0,8,90	0/0:14,0:14:36.09:0,36,1094	0/0:17,0:17:45.14:0,45,1494	0/0:7,0:7:15.05:0,15,477	0/0:29,0:29:81.21:0,81,2098	0/0:2,0:5:6.02:0,6,93	0/0:15,0:15:42.13:0,42,1213	0/0:12,0:12:36.09:0,36,1019	1/1:5,4:9:18.03:785,18,0	1/1:5,4:9:15.01:616,15,0	1/1:6,2:8:12.03:463,12,0	0/0:9,0:9:24.07:0,24,694	0/0:7,0:7:21.07:0,21,790	0/0:17,0:17:45.15:0,45,1580	0/0:13,0:13:36.12:0,36,1179	0/0:16,0:16:48.15:0,48,1528	0/0:11,0:11:33.08:0,33,920	./.	./.	1/1:3,1:4:3.01:184,3,0	1/1:2,0:2:3.01:46,3,0	1/1:6,0:14:24.05:277,24,0	0/0:16,0:16:48.14:0,48,1598	0/0:6,0:5:18.01:0,18,541	0/0:18,0:18:54.19:0,54,1905
chr10	79575322	.	A	AT	2458.70	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-2.307;DP=364;FS=2.005;HRun=3;HaplotypeScore=40.4718;InbreedingCoeff=0.9754;MQ=85.50;MQ0=0;MQRankSum=-3.962;QD=33.23;ReadPosRankSum=3.857;VQSLOD=3.6036;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:9:21.04:273,21,0	0/0:5,0:5:15.05:0,15,179	0/0:14,0:13:31.96:0,32,385	0/0:12,0:12:33.10:0,33,396	0/0:18,0:18:54.17:0,54,648	0/0:17,0:17:51.16:0,51,612	0/0:7,0:7:18.05:0,18,216	0/0:42,0:42:99:0,108,1267	0/0:7,0:7:18.06:0,18,216	0/0:18,0:18:51.16:0,51,611	0/0:24,0:24:69.21:0,69,827	1/1:0,10:10:27.09:378,27,0	1/1:3,11:14:33.11:459,33,0	1/1:1,8:9:24.08:336,24,0	0/0:14,0:14:39.12:0,39,468	0/0:10,0:10:30.08:0,30,349	0/0:17,0:17:45.14:0,45,540	0/0:15,0:15:39.12:0,39,468	0/0:13,0:13:36.11:0,36,432	0/0:15,0:15:45.13:0,45,529	0/0:5,0:5:15.05:0,15,180	1/1:0,5:5:15.05:210,15,0	1/1:0,6:6:18.06:252,18,0	1/1:0,3:3:9.03:126,9,0	1/1:2,16:18:45.15:630,45,0	0/0:16,0:16:48.13:0,48,564	0/0:14,0:13:39.12:0,39,467	0/0:7,0:7:18.06:0,18,216
chr10	79575547	.	TA	T	3739.33	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.894;DP=506;FS=11.861;HRun=6;HaplotypeScore=51.9939;InbreedingCoeff=0.9928;MQ=86.73;MQ0=0;MQRankSum=-3.474;QD=26.52;ReadPosRankSum=3.701;VQSLOD=3.2050;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:51.13:548,51,0	0/0:9,0:9:27.09:0,27,355	0/0:16,0:16:20.36:0,20,443	0/0:19,0:19:45.14:0,45,549	0/0:16,0:16:39.11:0,39,494	0/0:15,0:15:45.15:0,45,592	0/0:11,0:11:33.08:0,33,396	0/0:36,0:36:84.27:0,84,1105	0/0:12,0:12:33.11:0,33,434	0/0:27,0:27:78.25:0,78,1014	0/0:22,0:22:56.96:0,57,697	1/1:0,24:24:60.12:645,60,0	1/1:1,14:15:39.10:419,39,0	1/1:1,23:24:54.14:580,54,0	0/0:25,0:25:75.21:0,75,955	0/0:25,0:25:69.21:0,69,893	0/0:26,0:26:78.23:0,78,999	0/0:10,0:10:27.07:0,27,340	0/0:13,0:13:39.12:0,39,500	0/0:16,0:16:45.15:0,45,592	0/0:13,0:13:36.12:0,36,474	1/1:2,13:15:30.07:322,30,0	1/1:1,16:17:42.11:451,42,0	1/1:0,5:5:12.03:129,12,0	1/1:2,21:23:60.15:645,60,0	0/0:26,0:26:69.22:0,69,908	0/0:21,0:21:60.19:0,60,787	0/0:7,0:7:21.07:0,21,274
chr10	79576058	.	ATGG	A	6212.50	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=16.280;DP=716;FS=0.367;HRun=0;HaplotypeScore=119.4136;InbreedingCoeff=0.9782;MQ=88.40;MQ0=0;MQRankSum=-7.078;QD=41.69;ReadPosRankSum=2.886;VQSLOD=6.3569;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,147,3268	0/0:8,0:8:24.08:0,24,568	0/0:24,0:24:69.24:0,69,1598	0/0:31,0:31:81.20:0,81,1701	0/0:23,0:23:66.23:0,66,1526	0/0:36,0:36:99:0,108,2508	0/0:26,0:26:75.26:0,75,1721	0/0:42,0:42:99:0,120,2700	0/0:30,0:30:90.31:0,90,2105	0/0:25,0:25:72.25:0,72,1686	0/0:16,0:16:48.16:0,48,1135	1/1:0,23:23:69.24:1216,69,0	1/1:2,29:31:78.27:1360,78,0	1/1:0,24:24:60.20:1043,60,0	0/0:37,0:37:99:0,105,2466	0/0:31,0:31:90.31:0,90,2129	0/0:17,0:17:48.16:0,48,1051	0/0:14,0:14:42.14:0,42,971	0/0:27,0:27:78.27:0,78,1843	0/0:30,0:30:90.30:0,90,2073	0/0:26,0:26:78.27:0,78,1844	1/1:0,24:24:54.18:944,54,0	1/1:1,22:23:44.98:760,45,0	1/1:0,24:24:51.17:891,51,0	0/0:8,0:8:24.08:0,24,541	0/0:32,0:32:93.31:0,93,2139	0/0:33,0:32:99:0,99,2302	0/0:2,0:2:6.02:0,6,142
chr10	79576297	.	CTTCCT	C	1391.15	PASS	AB=0.668;AC=7;AF=0.125;AN=56;BaseQRankSum=10.031;DP=447;FS=21.836;HRun=0;HaplotypeScore=89.0252;InbreedingCoeff=0.1756;MQ=55.11;MQ0=13;MQRankSum=-9.563;QD=20.16;ReadPosRankSum=2.234;VQSLOD=1.7575;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:27.74:0,28,547	0/0:2,0:2:6.02:0,6,200	0/0:45,0:11:26.04:0,26,455	0/0:34,0:11:14.77:0,15,470	0/0:19,0:19:57.19:0,57,1365	0/0:16,0:16:45.15:0,45,1443	0/0:13,0:13:36.12:0,36,1110	0/0:28,0:28:75.21:0,75,1558	0/0:17,0:17:51.17:0,51,1320	0/0:12,0:12:36.12:0,36,909	0/0:14,0:14:39.09:0,39,1023	1/1:2,12:14:26.92:457,27,0	0/1:5,5:10:16.93:195,0,17	0/1:3,7:10:20.43:249,0,20	0/0:19,0:19:31.40:0,31,1480	0/0:23,0:23:69.24:0,69,2123	0/0:11,0:11:33.10:0,33,908	0/0:11,0:11:33.11:0,33,891	0/0:18,0:17:51.17:0,51,1390	0/0:12,0:11:33.11:0,33,892	0/0:19,0:19:56:0,56,1659	0/1:6,8:14:26.72:316,0,27	0/1:5,7:12:23.66:241,0,24	0/1:7,2:8:47.59:71,0,48	0/0:8,0:8:22.89:0,23,498	0/0:20,0:20:60.21:0,60,1772	0/0:16,0:16:48.16:0,48,1489	0/0:8,0:6:16.30:0,16,402
chr10	79576351	.	C	CT	2423.78	PASS	AB=0.875;AC=13;AF=0.232;AN=56;BaseQRankSum=10.828;DP=384;FS=2.379;HRun=1;HaplotypeScore=61.7751;InbreedingCoeff=0.8517;MQ=65.06;MQ0=4;MQRankSum=-4.282;QD=26.93;ReadPosRankSum=2.289;VQSLOD=3.6583;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:24.20:0,24,560	0/0:3,0:3:9.03:0,9,117	0/0:21,0:7:15.02:0,15,155	0/0:26,0:11:24.15:0,24,226	0/0:21,0:21:63.14:0,63,770	0/0:4,0:4:9.03:0,9,117	0/0:15,0:15:36.12:0,36,467	0/0:12,0:12:26.98:0,27,306	0/0:17,0:17:48.11:0,48,579	0/0:15,0:15:39.11:0,39,474	0/0:14,0:14:42.10:0,42,515	1/1:0,13:13:39.13:536,39,0	1/1:2,10:12:24.08:326,24,0	1/1:3,11:14:27.09:372,27,0	0/0:16,0:16:45.13:0,45,567	0/0:16,0:16:45.13:0,45,569	0/0:6,0:6:15.02:0,15,183	0/1:6,1:7:24.46:24,0,159	0/0:12,0:12:33.10:0,33,417	0/0:18,0:18:54.17:0,54,686	0/0:12,0:12:36.10:0,36,452	1/1:2,14:16:39.09:524,39,0	1/1:1,16:17:39.13:538,39,0	1/1:2,9:10:19.33:292,19,0	0/0:11,2:13:20.08:0,20,383	0/0:15,0:15:45.13:0,45,561	0/0:15,0:15:42.06:0,42,494	0/0:2,0:2:6.02:0,6,77
chr10	79577541	.	AC	A	6564.74	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.519;DP=740;FS=4.906;HRun=1;HaplotypeScore=73.1904;InbreedingCoeff=0.9988;MQ=88.49;MQ0=0;MQRankSum=-1.395;QD=39.08;ReadPosRankSum=3.300;VQSLOD=5.6466;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,2105	0/0:7,0:7:21.07:0,21,336	0/0:28,0:28:84.29:0,84,1340	0/0:26,0:26:70.68:0,71,1134	0/0:32,0:32:96.33:0,96,1534	0/0:22,0:22:63.21:0,63,1007	0/0:29,0:28:87.30:0,87,1386	0/0:27,0:27:81.28:0,81,1290	0/0:26,0:26:78.27:0,78,1243	0/0:30,0:30:90.31:0,90,1440	0/0:25,0:25:75.26:0,75,1199	1/1:0,29:29:87.29:1217,87,0	1/1:0,24:24:69.23:965,69,0	1/1:0,38:38:99:1509,108,0	0/0:34,1:35:63.37:0,63,1561	0/0:19,0:19:57.19:0,57,911	0/0:29,0:29:87.30:0,87,1384	0/0:25,0:25:69.22:0,69,1070	0/0:17,0:17:51.17:0,51,814	0/0:28,0:28:84.27:0,84,1319	0/0:40,0:40:99:0,120,1891	1/1:0,31:31:87.25:1195,87,0	1/1:0,18:18:51.17:713,51,0	1/1:0,28:28:69.23:965,69,0	0/0:17,0:17:51.17:0,51,813	0/0:24,0:24:72.25:0,72,1152	0/0:33,0:33:99:0,99,1583	0/0:8,0:8:24.08:0,24,384
chr10	79577751	.	AGAG	A	5791.22	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.878;DP=685;FS=6.035;HRun=0;HaplotypeScore=107.6853;InbreedingCoeff=0.9882;MQ=90.16;MQ0=0;MQRankSum=-4.752;QD=45.60;ReadPosRankSum=4.137;VQSLOD=6.8970;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,2696	0/0:12,0:12:36.11:0,36,805	0/0:32,0:32:90.29:0,90,2022	0/0:21,0:21:63.15:0,63,1253	0/0:36,0:36:99:0,105,2458	0/0:34,0:34:99:0,102,2410	0/0:22,0:21:66.23:0,66,1525	0/0:44,0:44:99:0,129,2990	0/0:23,0:23:63.22:0,63,1490	0/0:30,0:30:87.30:0,87,2040	0/0:17,0:17:51.18:0,51,1206	1/1:3,18:21:51.17:884,51,0	1/1:2,20:22:54.18:950,54,0	1/1:2,22:24:63.22:1112,63,0	0/0:29,0:29:87.30:0,87,2058	0/0:31,0:31:93.31:0,93,2148	0/0:20,0:20:60.21:0,60,1385	0/0:17,0:17:51.13:0,51,1132	0/0:29,0:29:84.27:0,84,1918	0/0:29,0:29:87.30:0,87,2053	0/0:18,0:18:54.19:0,54,1277	1/1:0,18:18:51.17:892,51,0	1/1:0,26:26:78.27:1371,78,0	1/1:1,15:16:33.11:582,33,0	0/0:21,0:21:63.22:0,63,1489	0/0:23,0:23:66.22:0,66,1518	0/0:29,0:29:84.29:0,84,1986	0/0:3,0:3:9.03:0,9,213
chr10	79578139	.	TTTAAC	T	3114.11	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.392;DP=599;FS=4.408;HRun=0;HaplotypeScore=114.1081;InbreedingCoeff=0.9707;MQ=86.10;MQ0=0;MQRankSum=-5.340;QD=55.61;ReadPosRankSum=1.113;VQSLOD=4.2073;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:81.28:1820,81,0	0/0:14,0:14:42.14:0,42,1399	0/0:16,0:16:45.13:0,45,1194	0/0:24,0:24:66.20:0,66,1873	0/0:24,0:24:72.25:0,72,2166	0/0:25,0:25:75.20:0,75,1975	0/0:19,0:19:57.20:0,57,1884	0/0:24,0:24:69.23:0,69,2110	0/0:17,0:17:51.18:0,51,1610	0/0:21,0:21:63.22:0,63,2069	0/0:13,0:13:39.13:0,39,1299	0/0:15,0:15:39.13:0,39,1240	0/0:20,0:20:60.19:0,60,1921	0/0:16,0:16:48.16:0,48,1535	0/0:25,0:25:75.26:0,75,2438	0/0:33,0:33:99:0,99,3183	0/0:21,0:21:63.22:0,63,1976	0/0:16,0:16:45.15:0,45,1446	0/0:20,0:20:60.21:0,60,1982	0/0:22,0:22:66.23:0,66,2176	0/0:24,0:24:72.25:0,72,2268	0/0:28,0:28:78.27:0,78,2442	0/0:19,0:19:42.14:0,42,1385	0/0:39,0:39:99:0,105,3407	1/1:0,23:23:63.17:1416,63,0	0/0:21,0:21:63.21:0,63,1968	0/0:24,0:23:72.25:0,72,2350	0/0:3,0:3:9.03:0,9,300
chr10	79578221	.	CAT	C	637.95	PASS	AB=1.000;AC=8;AF=0.154;AN=52;BaseQRankSum=5.474;DP=515;FS=7.112;HRun=0;HaplotypeScore=88.9984;InbreedingCoeff=0.5574;MQ=66.63;MQ0=23;MQRankSum=-4.229;QD=6.32;ReadPosRankSum=-1.146;VQSLOD=1.7733;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:14.96:0,15,119	0/0:5,0:5:15.01:0,15,168	0/0:33,0:21:59.92:0,60,590	0/0:31,0:20:17.44:0,17,414	0/0:17,0:17:35.85:0,36,379	0/0:21,0:20:35.70:0,36,261	0/0:24,0:21:34.59:0,35,298	0/0:16,0:16:44.60:0,45,359	0/0:20,0:19:23.75:0,24,171	0/1:13,0:13:7.52:8,0,236	0/0:8,0:8:18:0,18,214	./.	1/1:17,0:16:27.26:230,27,0	1/1:22,0:22:47.69:475,48,0	0/0:17,0:17:26.60:0,27,272	0/0:14,0:13:16.36:0,16,249	0/0:14,0:12:6.31:0,6,177	0/1:25,0:25:15.64:16,0,508	0/0:10,0:10:1.89:0,2,209	0/0:16,0:16:5.18:0,5,246	0/0:11,0:10:20.92:0,21,216	1/1:1,23:23:5.93:49,6,0	0/0:0,22:22:0.47:0,0,1	./.	0/0:17,1:18:12.36:0,12,102	0/0:20,0:19:11:0,11,384	0/0:22,0:22:38.84:0,39,585	0/0:7,0:5:14.96:0,15,120
chr10	79578265	.	CAGAG	C	2189.11	PASS	AB=0.947;AC=31;AF=0.596;AN=52;BaseQRankSum=-1.140;DP=492;FS=17.191;HRun=0;HaplotypeScore=100.0680;InbreedingCoeff=0.3286;MQ=43.80;MQ0=46;MQRankSum=3.986;QD=6.46;ReadPosRankSum=-0.018;VQSLOD=1.2271;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:11:6.01:0,6,96	1/1:6,0:6:6.02:71,6,0	./.	./.	1/1:23,0:21:9.02:114,9,0	1/1:18,0:17:2.05:41,2,0	0/0:24,0:16:5.69:0,6,83	0/0:14,0:9:0:0,0,0	0/0:21,0:19:11.87:0,12,232	0/1:7,4:10:8.34:115,0,8	1/1:13,0:12:3.01:44,3,0	1/1:16,0:14:4.72:18,5,0	0/0:15,0:12:5.05:0,5,22	0/0:22,0:20:6.32:0,6,87	0/1:26,0:24:9.83:28,0,10	1/1:18,0:17:36.01:512,36,0	0/0:16,0:12:9.57:0,10,217	0/1:30,0:28:17:272,0,17	1/1:13,3:15:5.91:66,6,0	1/1:16,0:16:6:63,6,0	1/1:18,0:12:9.03:117,9,0	0/1:19,0:17:25.01:27,0,25	1/1:23,0:22:0.10:1,0,0	0/0:26,0:24:6.74:0,7,68	1/1:21,0:23:15.04:173,15,0	1/1:17,10:26:27:354,27,0	1/1:27,0:28:23.89:306,24,0	0/1:8,0:3:23.93:30,0,24
chr10	79579953	.	T	TC	69.55	PASS	AB=0.500;AC=12;AF=0.667;AN=18;BaseQRankSum=0.747;DP=16;FS=0.000;HRun=0;HaplotypeScore=25.5410;MQ=29.14;MQ0=0;MQRankSum=0.747;QD=6.96;ReadPosRankSum=0.747;VQSLOD=3.0447;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	1/1:0,1:1:2.98:22,3,0	0/0:0,2:2:0.39:0,0,1	./.	1/1:0,1:1:2.94:18,3,0	./.	./.	./.	./.	./.	./.	1/1:0,3:3:8.90:60,9,0	0/1:0,2:2:0:0,0,0	./.	1/1:0,1:1:2.97:20,3,0	./.	./.	./.	./.	./.	0/1:0,1:1:0:0,0,0	1/1:0,1:1:2.97:20,3,0	0/0:0,1:1:1.25:0,1,3	./.
chr10	79580283	.	C	CCT	180.04	PASS	AB=0.908;AC=12;AF=0.214;AN=56;BaseQRankSum=5.475;DP=205;FS=3.257;HRun=0;HaplotypeScore=44.0440;InbreedingCoeff=-0.2964;MQ=76.59;MQ0=3;MQRankSum=-3.416;QD=2.00;ReadPosRankSum=-2.660;VQSLOD=0.9811;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.03:0,63,881	0/1:3,0:3:44.95:45,0,89	0/0:13,0:9:17.88:0,18,236	0/1:15,0:12:12.95:13,0,257	0/1:5,1:8:62.77:63,0,131	0/0:7,0:7:20.10:0,20,297	0/0:15,0:15:42.14:0,42,678	0/1:4,1:5:35.27:35,0,43	0/1:5,0:6:18.87:19,0,158	0/1:8,1:9:36.70:37,0,250	0/0:5,0:5:12.04:0,12,196	0/0:4,0:4:12.04:0,12,196	0/1:2,0:2:0.54:1,0,20	0/0:3,0:3:9.03:0,9,147	0/0:5,0:5:15.04:0,15,220	0/1:2,1:3:13.57:14,0,86	0/1:6,0:7:15.24:15,0,238	0/0:5,0:5:0.87:0,1,129	0/0:7,0:7:18.06:0,18,293	0/1:8,3:11:26.67:27,0,261	0/0:8,0:8:20.26:0,20,313	0/0:5,0:5:12.04:0,12,196	0/0:1,0:1:3.01:0,3,49	0/0:3,0:3:9.03:0,9,147	0/1:11,1:12:14.76:15,0,364	0/0:9,0:9:21.07:0,21,342	0/1:6,1:7:39.64:40,0,269	0/0:3,0:3:6.02:0,6,98
chr10	79580714	.	G	GCCC	1880.39	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=9.188;DP=610;FS=0.000;HRun=8;HaplotypeScore=132.0819;InbreedingCoeff=0.9653;MQ=68.82;MQ0=1;MQRankSum=-3.989;QD=13.73;ReadPosRankSum=-1.975;VQSLOD=-0.0411;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:30:57.71:434,58,0	0/0:15,0:15:39.09:0,39,498	0/0:28,0:27:59.88:0,60,738	0/0:29,0:27:34.03:0,34,423	0/0:28,0:28:75.20:0,75,953	0/0:24,0:24:72.22:0,72,931	0/0:27,0:27:72.69:0,73,933	0/0:33,0:33:78.22:0,78,1005	0/0:22,0:22:63.17:0,63,798	0/0:22,0:22:57.17:0,57,749	0/0:27,0:27:72.23:0,72,946	1/1:7,7:16:14.96:186,15,0	1/1:9,4:15:8.93:181,9,0	1/1:6,11:20:23.88:284,24,0	0/0:24,0:24:66.18:0,66,853	0/0:17,0:18:49.70:0,50,638	0/0:24,0:24:66.15:0,66,833	0/0:8,0:9:23.89:0,24,270	0/0:18,0:18:45.10:0,45,559	0/0:29,0:29:72.20:0,72,931	0/0:39,0:38:93.22:0,93,1203	1/1:8,6:14:12.51:243,13,0	1/1:4,5:10:14.76:241,15,0	1/1:10,9:20:19.33:329,19,0	1/1:4,6:12:9.03:182,9,0	0/0:25,0:25:63.17:0,63,828	0/0:25,0:25:66.17:0,66,851	0/0:6,0:6:15.04:0,15,197
chr10	79581705	.	ATTGTTGTTG	A	12019.69	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=3.091;DP=550;FS=3.578;HRun=0;HaplotypeScore=176.2873;InbreedingCoeff=0.9668;MQ=65.01;MQ0=4;MQRankSum=-12.698;QD=47.89;ReadPosRankSum=1.163;VQSLOD=4.5803;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:25:51.17:0,51,951	1/1:3,3:6:12.04:297,12,0	0/0:28,0:22:45.15:0,45,1495	0/0:24,0:23:39.58:0,40,1280	1/1:14,20:34:66.18:1762,66,0	0/0:32,0:32:69.20:0,69,2862	0/0:22,0:21:39.13:0,39,1575	1/1:26,7:33:48.14:954,48,0	0/0:14,0:14:33.11:0,33,1356	1/1:10,14:24:54.18:1414,54,0	1/1:12,3:13:15.04:362,15,0	0/0:10,0:24:37.53:0,38,701	0/0:10,0:20:42.13:0,42,768	0/0:5,0:24:42.13:0,42,781	1/1:6,11:17:36.59:1024,37,0	1/1:5,13:18:48.15:1302,48,0	0/0:16,0:16:32.60:0,33,1349	1/1:1,1:2:6.02:156,6,0	1/1:15,8:22:33.10:779,33,0	1/1:5,10:15:30.10:852,30,0	1/1:7,3:10:12.03:280,12,0	0/0:5,0:18:43.62:0,44,797	0/0:7,0:16:32.14:0,32,606	0/0:5,0:16:39.13:0,39,738	0/0:8,0:20:30.10:0,30,562	1/1:9,14:23:45.15:1221,45,0	1/1:4,15:19:51.17:1405,51,0	1/1:10,2:12:9.03:212,9,0
chr10	79581753	.	GT	G	6073.60	PASS	AB=0.816;AC=28;AF=0.500;AN=56;BaseQRankSum=5.422;DP=606;FS=1.097;HRun=10;HaplotypeScore=125.6860;InbreedingCoeff=0.8300;MQ=77.87;MQ0=1;MQRankSum=-3.740;QD=19.53;ReadPosRankSum=2.838;VQSLOD=4.0051;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:54.12:0,54,580	1/1:4,5:9:20.46:160,20,0	0/0:38,0:28:44.01:0,44,371	0/0:40,1:32:2.28:0,2,300	1/1:5,22:27:59.82:509,60,0	0/0:28,3:32:28.94:0,29,751	0/0:20,1:20:28.10:0,28,530	1/1:5,23:28:68.38:548,68,0	0/0:21,0:21:57.13:0,57,609	1/1:4,33:37:68.77:823,69,0	1/1:1,16:17:47.94:409,48,0	0/1:13,2:15:15.96:16,0,296	0/0:13,0:13:33.06:0,33,346	0/0:26,1:27:37.10:0,37,627	1/1:5,19:24:28.65:463,29,0	1/1:4,12:16:35.98:312,36,0	0/0:13,0:13:36.08:0,36,388	1/1:2,9:11:23.91:199,24,0	1/1:4,18:22:53.95:465,54,0	1/1:4,25:29:74.88:641,75,0	1/1:1,12:13:26.15:300,26,0	0/0:18,1:19:28.06:0,28,525	0/0:16,1:17:19.08:0,19,418	0/0:13,0:13:26.66:0,27,276	0/0:17,0:18:35.96:0,36,431	1/1:5,21:26:59.95:517,60,0	1/1:3,28:31:50.82:670,51,0	0/1:4,2:6:24.19:43,0,24
chr10	79581859	.	GT	G	2635.66	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=8.154;DP=563;FS=16.352;HRun=8;HaplotypeScore=72.9171;InbreedingCoeff=0.9975;MQ=75.57;MQ0=2;MQRankSum=-1.261;QD=21.96;ReadPosRankSum=2.890;VQSLOD=2.6928;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,17:23:51.04:485,51,0	0/0:9,0:9:27.08:0,27,326	0/0:34,0:26:43.26:0,43,407	0/0:46,1:32:22.78:0,23,399	0/0:24,0:24:66.18:0,66,774	0/0:30,0:30:87.22:0,87,1025	0/0:12,0:11:30.09:0,30,362	0/0:26,0:27:69.04:0,69,796	0/0:14,0:15:41.99:0,42,476	0/0:33,0:33:84.26:0,84,1011	0/0:23,0:23:66.20:0,66,796	1/1:0,14:14:36.06:348,36,0	1/1:3,14:17:39.06:377,39,0	1/1:2,14:16:39.06:377,39,0	0/0:21,0:21:54.17:0,54,652	0/0:20,0:20:54.16:0,54,641	0/0:17,0:17:48.13:0,48,568	0/0:15,0:15:30.01:0,30,328	0/0:17,0:17:42.11:0,42,485	0/0:30,0:30:90.25:0,90,1056	0/0:14,0:14:35.70:0,36,408	1/1:2,7:9:27.03:256,27,0	1/1:4,14:18:41.68:395,42,0	1/1:0,12:12:33.05:317,33,0	1/1:1,10:11:30.05:290,30,0	0/0:26,0:26:75.21:0,75,883	0/0:23,0:22:66.18:0,66,774	0/0:6,0:6:18.06:0,18,217
chr10	79582815	.	TTCTCTCTC	T	509.77	PASS	AB=0.954;AC=16;AF=0.400;AN=40;BaseQRankSum=4.373;DP=500;FS=10.962;HRun=0;HaplotypeScore=132.9058;InbreedingCoeff=0.4034;MQ=66.94;MQ0=14;MQRankSum=-3.248;QD=3.33;ReadPosRankSum=2.464;VQSLOD=2.0886;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:1.25:0,1,3	0/0:4,0:4:6.02:0,6,138	./.	./.	./.	0/0:24,0:24:6.02:0,6,216	0/0:14,0:13:4.73:0,5,66	0/0:36,0:35:5.69:0,6,17	1/1:6,5:12:15.05:336,15,0	0/0:31,0:30:30.10:0,30,671	./.	1/1:21,0:21:5.75:68,6,0	1/1:17,0:16:6.02:122,6,0	1/1:18,0:18:1.25:3,1,0	0/0:17,1:18:9:0,9,120	0/0:20,0:20:12.03:0,12,244	0/0:27,0:27:30.10:0,30,861	./.	1/1:10,0:10:3:26,3,0	0/0:18,0:18:2.97:0,3,20	./.	1/1:21,0:21:0.89:2,1,0	./.	1/1:12,0:12:3.01:55,3,0	./.	0/1:21,0:21:16.83:17,0,159	0/1:19,0:19:9.41:9,0,33	0/0:9,0:7:2.99:0,3,23
chr10	79582868	.	TCTCTC	T	377.32	PASS	AB=0.991;AC=23;AF=0.411;AN=56;BaseQRankSum=8.207;DP=505;FS=2.555;HRun=0;HaplotypeScore=140.5256;InbreedingCoeff=0.1963;MQ=60.12;MQ0=12;MQRankSum=3.676;QD=1.14;ReadPosRankSum=-0.536;VQSLOD=2.5629;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:3.37:7,3,0	0/0:7,0:7:5.78:0,6,56	0/0:18,0:13:39.07:0,39,481	0/0:17,0:10:22.38:0,22,244	0/0:13,0:13:3.39:0,3,26	0/0:15,0:14:36.12:0,36,593	0/0:20,0:19:28.92:0,29,369	0/1:35,0:34:58.91:59,0,159	0/1:20,0:20:47.08:47,0,361	0/1:29,0:27:49.49:49,0,304	1/1:17,0:17:5.11:10,5,0	0/1:20,0:20:7.14:43,0,7	0/1:18,0:18:10.83:81,0,11	0/1:22,0:22:1.04:1,0,27	0/0:13,0:13:1.52:0,2,23	0/0:14,0:14:8.76:0,9,129	0/0:26,0:26:63.65:0,64,1067	0/0:5,0:4:5.06:0,5,16	1/1:6,1:7:13.07:54,13,0	1/1:17,1:17:8.86:18,9,0	0/0:14,0:13:3.04:0,3,15	0/1:20,0:20:1.40:6,0,1	1/1:13,0:13:7.47:15,7,0	1/1:16,0:16:3.48:39,3,0	1/1:16,0:15:4.78:15,5,0	0/1:28,1:27:37.89:84,0,38	0/1:20,1:20:13.90:14,0,71	0/0:12,0:12:8.34:0,8,25
chr10	79582873	.	C	CAT	14053.24	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-4.367;DP=528;FS=4.332;HRun=0;HaplotypeScore=77.9572;InbreedingCoeff=0.9453;MQ=64.71;MQ0=8;MQRankSum=-1.013;QD=34.28;ReadPosRankSum=1.187;VQSLOD=6.7879;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:54.07:869,54,0	1/1:6,0:6:15.04:221,15,0	0/0:23,0:18:48.08:0,48,672	0/0:18,0:11:18.07:0,18,255	1/1:14,0:14:33.11:522,33,0	0/0:15,0:15:32.61:0,33,480	0/0:17,0:16:26.41:0,26,398	1/1:38,0:37:99:1580,104,0	0/0:21,0:21:37.94:0,38,500	1/1:27,0:26:68.97:1210,69,0	1/1:19,0:19:39.12:612,39,0	1/1:23,0:23:62.79:963,63,0	1/1:19,0:19:36.07:504,36,0	1/1:25,0:25:50.43:720,50,0	1/1:14,0:14:27.09:434,27,0	1/1:15,0:15:28.74:450,29,0	0/0:24,0:24:59.77:0,60,752	1/1:5,0:4:12.04:175,12,0	1/1:8,0:8:14.21:335,14,0	1/1:19,0:18:39.13:641,39,0	1/1:14,0:14:27.09:414,27,0	1/1:23,0:23:57.18:890,57,0	1/1:13,0:13:33.11:541,33,0	1/1:1,14:17:2.10:17,2,0	1/1:17,0:17:45.15:735,45,0	1/1:27,0:26:64.42:1093,64,0	1/1:24,0:23:55.78:764,56,0	1/1:11,0:11:24.08:364,24,0
chr10	79584274	.	ATAGAG	A	28028.04	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=12.475;DP=681;FS=4.950;HRun=0;HaplotypeScore=150.2209;InbreedingCoeff=0.9877;MQ=88.78;MQ0=0;MQRankSum=-9.299;QD=51.81;ReadPosRankSum=4.916;VQSLOD=5.1522;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:48.16:1021,48,0	1/1:0,14:14:33.11:699,33,0	0/0:29,0:29:78.25:0,78,2264	0/0:27,0:27:69.22:0,69,1578	1/1:1,32:33:78.27:1631,78,0	0/0:32,0:32:96.31:0,96,2717	0/0:17,0:17:51.18:0,51,1577	1/1:2,34:35:99:1973,99,0	0/0:24,0:24:66.23:0,66,2067	1/1:0,26:26:78.27:1662,78,0	1/1:1,30:31:78.27:1631,78,0	1/1:1,18:19:51.18:1087,51,0	1/1:2,21:23:51.17:1028,51,0	1/1:3,28:31:60.20:1231,60,0	1/1:0,32:32:78.27:1662,78,0	1/1:0,21:21:48.16:1023,48,0	0/0:11,0:11:30.10:0,30,902	1/1:3,11:14:24.08:507,24,0	1/1:3,15:18:45.15:911,45,0	1/1:1,39:40:99:2201,105,0	1/1:2,17:19:39.61:832,40,0	1/1:1,15:16:39.13:783,39,0	1/1:0,23:23:54.17:1150,54,0	1/1:1,15:16:36.12:746,36,0	1/1:1,31:32:90.31:1882,90,0	1/1:0,29:29:87.30:1789,87,0	1/1:0,45:45:99:2386,114,0	1/1:0,3:3:9.03:192,9,0
chr10	79585857	.	ATTCATGT	A	2875.65	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.946;DP=672;FS=14.488;HRun=0;HaplotypeScore=149.3916;InbreedingCoeff=0.9987;MQ=88.96;MQ0=0;MQRankSum=-10.680;QD=53.25;ReadPosRankSum=0.270;VQSLOD=3.0645;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:48.08:1050,48,0	0/0:15,0:15:42.14:0,42,1601	0/0:24,0:24:66.23:0,66,2422	0/0:29,0:29:78.27:0,78,2703	0/0:22,0:22:66.21:0,66,2482	0/0:36,0:36:99:0,105,4148	0/0:24,0:24:72.25:0,72,2803	0/0:28,0:28:72.25:0,72,2665	0/0:26,0:26:78.27:0,78,3059	0/0:27,0:27:78.27:0,78,3106	0/0:23,0:23:66.21:0,66,2402	0/0:21,0:21:63.22:0,63,2503	0/0:33,0:33:99:0,99,3856	0/0:20,0:20:57.18:0,57,2127	0/0:19,0:19:54.17:0,54,2049	0/0:36,0:36:99:0,108,4233	0/0:28,0:28:84.29:0,84,3267	0/0:19,0:19:51.17:0,51,2039	0/0:13,0:13:33.11:0,33,1249	0/0:33,0:33:93.32:0,93,3544	0/0:12,0:12:36.12:0,36,1360	0/0:15,0:15:45.15:0,45,1800	0/0:26,0:26:78.27:0,78,3031	0/0:16,0:16:45.15:0,45,1779	1/1:3,27:30:75.26:1947,75,0	0/0:26,0:26:75.26:0,75,2943	0/0:39,0:39:99:0,117,4522	0/0:8,0:8:24.08:0,24,923
chr10	79586283	.	TAAA	T	11949.11	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=9.208;DP=606;FS=2.725;HRun=13;HaplotypeScore=98.9053;InbreedingCoeff=0.9686;MQ=66.18;MQ0=3;MQRankSum=0.481;QD=28.12;ReadPosRankSum=2.798;VQSLOD=4.4828;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:84.29:0,84,1591	1/1:2,12:14:33.09:401,33,0	0/0:19,0:10:19.28:0,19,252	0/0:11,0:6:9.02:0,9,143	1/1:5,25:30:75.13:883,75,0	0/0:27,0:28:75.24:0,75,1379	0/0:16,0:16:42.14:0,42,807	1/1:6,24:30:69.08:815,69,0	0/0:24,0:25:66.22:0,66,1208	1/1:9,24:33:72.19:869,72,0	1/1:3,15:18:45.11:545,45,0	1/1:3,16:19:51.09:602,51,0	1/1:2,22:24:57.17:693,57,0	1/1:4,15:19:36.09:438,36,0	1/1:2,32:33:90.25:1086,90,0	1/1:1,17:18:42.12:511,42,0	0/0:25,0:25:60.21:0,60,1153	1/1:3,16:19:36.05:436,36,0	1/1:6,14:20:42.09:509,42,0	1/1:3,28:33:89.85:1050,90,0	1/1:4,13:17:33.07:401,33,0	1/1:4,7:12:18.61:231,19,0	1/1:3,21:24:57.16:693,57,0	1/1:2,6:8:9.02:109,9,0	0/0:5,0:24:50.83:0,51,409	1/1:1,22:23:63.13:766,63,0	1/1:4,23:27:66.18:801,66,0	1/1:0,3:3:9.03:109,9,0
chr10	79592288	.	G	GTAA	21189.77	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=4.448;DP=591;FS=6.948;HRun=0;HaplotypeScore=98.0604;InbreedingCoeff=0.9453;MQ=77.15;MQ0=0;MQRankSum=-3.137;QD=44.80;ReadPosRankSum=2.488;VQSLOD=6.8515;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,36:41:96.33:2060,96,0	1/1:1,4:5:12.04:258,12,0	0/0:19,0:18:42.07:0,42,546	0/0:12,0:12:21.04:0,21,286	1/1:8,25:33:72.16:1441,72,0	0/0:16,0:16:42.13:0,42,626	0/0:20,0:20:48.15:0,48,717	1/1:9,20:33:72.17:1298,72,0	0/0:26,0:26:66.21:0,66,998	1/1:3,28:31:84.27:1748,84,0	1/1:2,18:20:42.10:857,42,0	1/1:5,18:24:48.16:1015,48,0	1/1:2,21:24:48.16:1030,48,0	1/1:5,18:23:54.19:1158,54,0	1/1:6,15:22:45.15:957,45,0	1/1:5,18:22:42.14:901,42,0	0/0:25,0:25:66.22:0,66,1018	1/1:2,10:12:24.08:515,24,0	1/1:6,15:22:48.14:925,48,0	1/1:6,16:23:48.09:942,48,0	1/1:3,15:18:36.12:773,36,0	1/1:3,6:10:9.03:193,9,0	1/1:1,16:17:36.12:773,36,0	1/1:2,9:12:18.06:387,18,0	1/1:2,20:22:54.19:1159,54,0	1/1:3,25:29:78.19:1524,78,0	1/1:4,23:27:57.20:1214,57,0	1/1:0,1:1:3.01:64,3,0
chr10	79592766	.	CTG	C	6918.85	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.500;DP=784;FS=11.659;HRun=0;HaplotypeScore=116.9986;InbreedingCoeff=0.9875;MQ=88.52;MQ0=0;MQRankSum=-1.234;QD=37.81;ReadPosRankSum=3.383;VQSLOD=6.6200;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,2299	0/0:9,0:9:21.07:0,21,384	0/0:28,0:28:75.23:0,75,1246	0/0:31,0:31:90.31:0,90,1579	0/0:28,0:28:60.17:0,60,1036	0/0:23,0:23:69.24:0,69,1259	0/0:35,0:35:99:0,99,1814	0/0:37,0:36:99:0,111,1905	0/0:22,0:22:66.21:0,66,1179	0/0:27,0:27:78.25:0,78,1375	0/0:15,0:15:39.12:0,39,663	1/1:1,45:46:99:1590,111,0	1/1:0,34:34:96.32:1375,96,0	1/1:4,29:33:78.26:1118,78,0	0/0:42,0:42:99:0,120,2180	0/0:36,0:35:99:0,108,1944	0/0:20,0:20:60.19:0,60,1070	0/0:16,0:16:48.16:0,48,866	0/0:36,0:36:99:0,99,1731	0/0:24,0:24:66.23:0,66,1205	0/0:40,0:40:99:0,117,2093	1/1:0,23:23:69.23:988,69,0	1/1:0,29:29:81.27:1160,81,0	1/1:0,18:18:48.16:688,48,0	0/0:29,0:29:81.28:0,81,1466	0/0:29,0:29:75.26:0,75,1365	0/0:27,0:27:81.28:0,81,1484	0/0:3,0:3:9.03:0,9,165
chr10	79593173	.	G	GAC	21380.82	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=15.758;DP=669;FS=21.229;HRun=0;HaplotypeScore=265.3975;InbreedingCoeff=0.9849;MQ=83.84;MQ0=1;MQRankSum=-16.682;QD=43.11;ReadPosRankSum=2.661;VQSLOD=1.4378;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:21:45.15:822,45,0	1/1:1,6:9:18.06:329,18,0	0/0:48,0:48:97.24:0,97,1452	0/0:44,0:39:57.12:0,57,996	1/1:2,23:25:66.23:1204,66,0	0/0:23,0:23:69.21:0,69,970	0/0:22,0:22:66.22:0,66,945	1/1:5,26:32:78.22:1392,78,0	1/1:5,15:20:48.16:872,48,0	1/1:7,32:39:99:1883,105,0	1/1:4,13:17:39.13:706,39,0	1/1:1,19:21:63.22:1139,63,0	1/1:3,19:22:60.20:1075,60,0	1/1:2,12:14:36.12:658,36,0	1/1:6,19:25:57.20:1041,57,0	1/1:5,16:21:48.16:877,48,0	0/0:33,0:33:93.29:0,93,1306	1/1:2,8:10:18.06:329,18,0	1/1:8,9:17:30.10:548,30,0	1/1:6,20:26:63.21:1122,63,0	1/1:1,6:7:12.04:219,12,0	1/1:7,24:32:72.24:1274,72,0	1/1:5,20:25:54.19:985,54,0	1/1:1,14:15:23.82:427,24,0	1/1:2,27:29:69.24:1261,69,0	1/1:6,32:38:99:1795,99,0	1/1:5,21:26:63.22:1149,63,0	1/1:0,5:5:15.05:274,15,0
chr10	79593307	.	T	TGGAG	20437.87	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=11.131;DP=536;FS=14.290;HRun=0;HaplotypeScore=140.4354;InbreedingCoeff=0.9616;MQ=83.55;MQ0=0;MQRankSum=-15.451;QD=50.97;ReadPosRankSum=3.102;VQSLOD=5.3514;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,13:19:24.08:627,24,0	1/1:1,7:8:20.65:504,21,0	0/0:22,0:22:57.09:0,57,859	0/0:26,0:26:66.70:0,67,1176	1/1:4,12:16:39.13:1008,39,0	0/0:24,0:24:60.19:0,60,1057	0/0:26,0:26:78.18:0,78,1320	1/1:13,11:25:39.13:1017,39,0	1/1:2,8:10:24.08:586,24,0	1/1:7,12:21:42.62:1057,43,0	1/1:3,8:11:24.08:622,24,0	1/1:7,15:23:45.15:1173,45,0	1/1:9,17:26:45.15:1132,45,0	1/1:5,10:15:30.10:782,30,0	1/1:7,17:26:54.18:1368,54,0	1/1:6,14:21:45.15:1174,45,0	0/0:37,0:37:99:0,108,1957	1/1:3,4:7:12.04:274,12,0	1/1:3,5:9:24.07:536,24,0	1/1:11,21:33:72.20:1757,72,0	1/1:3,5:8:9.03:235,9,0	1/1:6,23:30:63.22:1638,63,0	1/1:6,19:27:51.11:1329,51,0	1/1:1,6:7:18.06:470,18,0	1/1:4,18:22:51.18:1327,51,0	1/1:8,11:19:33.11:862,33,0	1/1:8,7:15:30.10:724,30,0	1/1:0,3:3:9.03:235,9,0
chr10	79593310	.	A	AGGGG	16267.97	PASS	AB=0.983;AC=42;AF=0.750;AN=56;BaseQRankSum=13.620;DP=535;FS=11.920;HRun=3;HaplotypeScore=159.3020;InbreedingCoeff=0.5540;MQ=84.88;MQ0=0;MQRankSum=-15.493;QD=40.77;ReadPosRankSum=4.584;VQSLOD=1.7620;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:47.46:557,0,47	1/1:8,0:8:20.61:387,21,0	0/0:22,0:22:41.20:0,41,889	0/0:28,0:28:66.69:0,67,1145	1/1:15,1:16:39.13:846,39,0	0/0:24,0:24:60.20:0,60,1069	0/0:26,0:26:78.27:0,78,1373	1/1:24,0:24:3.66:834,4,0	1/1:10,0:10:27.04:497,27,0	1/1:20,0:20:48.10:850,48,0	0/1:13,1:14:63.76:470,0,64	1/1:23,0:23:35.20:970,35,0	1/1:24,0:24:4.18:824,4,0	1/1:12,0:12:30.10:604,30,0	1/1:26,0:26:57.15:1094,57,0	1/1:20,0:20:48.16:938,48,0	0/0:36,0:36:99:0,108,1942	1/1:6,0:6:18.02:305,18,0	0/1:11,0:11:21.98:349,0,22	1/1:31,1:32:72.63:1356,73,0	0/1:8,0:8:12.90:168,0,13	1/1:29,0:29:63.22:1276,63,0	1/1:28,0:28:29.19:1016,29,0	1/1:8,0:8:18.06:362,18,0	1/1:22,1:23:7.31:991,7,0	1/1:19,0:19:14.24:696,14,0	1/1:16,0:16:39.09:701,39,0	1/1:3,0:3:9.03:175,9,0
chr10	79593523	.	G	GAC	22593.14	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-6.402;DP=590;FS=3.502;HRun=0;HaplotypeScore=81.9638;InbreedingCoeff=0.9926;MQ=93.02;MQ0=1;MQRankSum=-9.183;QD=47.97;ReadPosRankSum=4.773;VQSLOD=6.2212;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:28:75.26:1374,75,0	1/1:1,8:9:21.07:382,21,0	0/0:22,0:22:63.19:0,63,877	0/0:38,0:38:99:0,107,1462	1/1:0,19:19:57.20:1030,57,0	0/0:22,0:22:60.20:0,60,858	0/0:19,0:19:54.18:0,54,774	1/1:3,27:30:81.26:1448,81,0	1/1:0,19:19:57.20:1037,57,0	1/1:1,16:17:48.16:876,48,0	1/1:2,9:12:24.08:431,24,0	1/1:1,32:34:84.29:1537,84,0	1/1:1,25:26:72.25:1316,72,0	1/1:1,18:19:54.19:983,54,0	1/1:1,29:30:81.28:1475,81,0	1/1:2,31:32:87.30:1567,87,0	0/0:18,0:18:54.16:0,54,753	1/1:0,14:14:39.13:715,39,0	1/1:1,10:12:33.10:576,33,0	1/1:1,9:10:27.09:494,27,0	1/1:2,30:34:90.31:1630,90,0	1/1:1,7:8:18.06:330,18,0	1/1:0,12:12:33.11:600,33,0	1/1:4,34:38:87.30:1594,87,0	1/1:1,10:13:30.10:546,30,0	1/1:2,22:24:66.18:1174,66,0	1/1:0,25:25:66.23:1205,66,0	1/1:0,5:5:15.05:275,15,0
chr10	79593756	.	AT	A	4680.10	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=17.213;DP=603;FS=0.342;HRun=7;HaplotypeScore=155.9390;InbreedingCoeff=0.9958;MQ=76.55;MQ0=0;MQRankSum=-2.410;QD=26.44;ReadPosRankSum=1.858;VQSLOD=2.8507;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:48.11:489,48,0	0/0:8,0:8:18.06:0,18,226	0/0:18,0:18:39.11:0,39,472	0/0:7,1:8:14.50:0,15,158	0/0:39,0:39:99:0,111,1385	0/0:24,0:24:72.23:0,72,906	0/0:22,0:22:63.19:0,63,778	0/0:33,0:33:81.25:0,81,1008	1/1:0,17:17:48.11:489,48,0	0/0:27,0:27:78.25:0,78,981	0/0:26,0:26:75.23:0,75,933	1/1:1,16:17:48.11:489,48,0	1/1:0,14:14:42.10:428,42,0	1/1:5,13:18:39.08:398,39,0	0/0:21,0:21:60.19:0,60,755	0/0:26,0:26:72.23:0,72,906	0/0:22,0:22:63.18:0,63,777	0/0:24,0:24:57.16:0,57,698	0/0:14,0:14:39.12:0,39,491	0/0:34,0:34:93.28:0,93,1157	0/0:11,0:11:33.11:0,33,415	1/1:2,21:22:60.13:612,60,0	1/1:2,25:27:66.14:673,66,0	1/1:1,14:15:39.09:398,39,0	1/1:4,23:27:69.16:704,69,0	0/0:24,0:24:63.20:0,63,793	0/0:31,0:31:84.27:0,84,1057	0/0:14,0:14:39.12:0,39,490
chr10	79594148	.	A	ATT	5082.20	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.722;DP=611;FS=5.421;HRun=9;HaplotypeScore=72.0748;InbreedingCoeff=0.9903;MQ=76.62;MQ0=2;MQRankSum=-0.315;QD=35.29;ReadPosRankSum=1.998;VQSLOD=5.2486;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:33.07:0,33,351	0/0:10,0:10:27.07:0,27,287	0/0:15,0:15:27.03:0,27,269	0/0:14,0:14:17.02:0,17,162	0/0:36,0:36:95.24:0,95,993	0/0:20,0:20:45.08:0,45,471	0/0:17,0:17:42.01:0,42,433	0/0:30,0:30:69.11:0,69,734	0/0:13,0:13:27.03:0,27,278	0/0:35,0:36:99:0,102,1066	0/0:21,0:21:54.11:0,54,575	1/1:3,20:22:54.01:815,54,0	1/1:4,26:30:78.26:1201,78,0	1/1:4,22:26:59.37:874,59,0	0/0:31,0:31:81.17:0,81,854	0/0:25,0:25:63.14:0,63,662	0/0:16,0:16:33.04:0,33,350	0/0:10,0:11:24.03:0,24,311	0/0:24,0:24:60.12:0,60,638	0/0:33,0:33:87.19:0,87,918	0/0:14,0:14:39.10:0,39,415	1/1:2,19:21:51.09:725,51,0	1/1:5,26:31:69.23:1052,69,0	1/1:3,9:12:27.09:415,27,0	0/0:24,0:24:60.12:0,60,628	0/0:20,0:20:51.11:0,51,543	0/0:39,0:38:99:0,108,1134	0/0:5,0:5:12:0,12,127
chr10	79594362	.	TTATC	T	1041.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.697;DP=629;FS=7.354;HRun=0;HaplotypeScore=126.3853;InbreedingCoeff=0.9400;MQ=73.33;MQ0=0;MQRankSum=-3.474;QD=45.30;ReadPosRankSum=-0.253;VQSLOD=3.9914;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:60.12:1137,60,0	0/0:9,0:9:27.09:0,27,742	0/0:13,0:13:33.47:0,33,740	0/0:8,0:8:12.04:0,12,382	0/0:31,0:31:93.32:0,93,2605	0/0:24,0:24:72.25:0,72,2045	0/0:19,0:18:57.19:0,57,1554	0/0:34,0:34:99:0,102,2729	0/0:21,0:21:63.20:0,63,1677	0/0:37,0:37:99:0,111,3096	0/0:22,0:22:66.23:0,66,1912	0/0:29,0:29:87.30:0,87,2420	0/0:39,0:39:99:0,117,3195	0/0:26,0:26:78.27:0,78,2211	0/0:26,0:26:78.27:0,78,2221	0/0:24,0:24:72.25:0,72,1975	0/0:24,0:24:69.22:0,69,1850	0/0:17,0:17:51.17:0,51,1431	0/0:13,0:13:39.13:0,39,1026	0/0:28,0:28:84.29:0,84,2383	0/0:18,0:18:51.16:0,51,1295	0/0:14,0:14:42.14:0,42,1182	0/0:23,0:23:69.24:0,69,1998	0/0:9,0:9:27.08:0,27,706	0/0:32,0:32:96.32:0,96,2692	0/0:24,0:24:72.25:0,72,2041	0/0:36,0:36:99:0,108,3000	0/0:6,0:6:12.02:0,12,348
chr10	79594594	.	TCC	T	1053.18	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.373;DP=610;FS=3.804;HRun=3;HaplotypeScore=121.4863;InbreedingCoeff=0.9954;MQ=63.89;MQ0=0;MQRankSum=3.691;QD=40.51;ReadPosRankSum=1.518;VQSLOD=3.3306;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1251	0/0:12,0:12:33.10:0,33,393	0/0:31,0:29:87.25:0,87,1616	0/0:25,0:22:63.16:0,63,1117	0/0:21,0:21:63.19:0,63,764	0/0:20,0:20:60.21:0,60,1159	0/0:20,0:20:60.19:0,60,1116	0/0:34,0:34:96.26:0,96,1053	1/1:1,25:26:75.25:1148,75,0	0/0:18,0:18:51.13:0,51,561	0/0:15,0:15:45.14:0,45,566	0/0:27,0:27:81.27:0,81,1521	0/0:25,0:25:72.22:0,72,1303	0/0:25,0:25:75.26:0,75,1434	0/0:41,0:41:99:0,117,1387	0/0:18,0:18:54.16:0,54,637	0/0:24,0:24:69.24:0,69,1331	0/0:14,0:14:39.12:0,39,468	0/0:17,0:17:48.10:0,48,524	0/0:26,0:26:75.21:0,75,888	0/0:27,0:27:81.25:0,81,980	0/0:12,0:12:36.12:0,36,694	0/0:17,0:17:51.15:0,51,918	0/0:13,0:12:39.13:0,39,753	0/0:16,0:16:45.14:0,45,540	0/0:25,0:25:75.19:0,75,814	0/0:19,0:18:57.18:0,57,728	0/0:7,0:7:21.07:0,21,260
chr10	79594748	.	T	TC	2483.50	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.827;DP=670;FS=0.000;HRun=1;HaplotypeScore=104.9340;InbreedingCoeff=0.9949;MQ=75.82;MQ0=1;MQRankSum=-3.947;QD=38.21;ReadPosRankSum=2.696;VQSLOD=3.7107;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,42:43:99:1661,111,0	0/0:10,0:10:27.09:0,27,351	0/0:16,0:16:29.44:0,29,401	0/0:17,0:19:35.54:0,36,529	0/0:29,0:29:81.26:0,81,1049	0/0:13,0:13:36.12:0,36,462	0/0:27,0:27:78.22:0,78,981	0/0:32,0:32:90.29:0,90,1167	0/0:15,0:15:45.11:0,45,566	0/0:22,0:22:66.21:0,66,846	0/0:28,0:28:81.26:0,81,1051	0/0:19,0:19:57.17:0,57,725	0/0:31,0:30:90.29:0,90,1168	0/0:21,0:21:57.18:0,57,740	0/0:24,0:24:66.21:0,66,857	0/0:28,0:28:81.26:0,81,1050	0/0:23,0:23:69.22:0,69,896	0/0:15,0:15:45.13:0,45,567	0/0:20,0:19:54.14:0,54,680	0/0:36,0:36:99:0,105,1361	0/0:28,0:28:72.23:0,72,934	0/0:26,0:26:69.21:0,69,877	0/0:34,0:34:99:0,102,1322	0/0:29,0:29:84.27:0,84,1090	1/1:0,22:22:63.21:944,63,0	0/0:32,0:32:93.30:0,93,1207	0/0:21,0:21:63.20:0,63,811	0/0:7,0:7:18.06:0,18,232
chr10	79595484	.	GT	G	7684.67	PASS	AB=0.975;AC=48;AF=0.857;AN=56;BaseQRankSum=8.861;DP=516;FS=5.694;HRun=12;HaplotypeScore=112.1215;InbreedingCoeff=0.7651;MQ=78.40;MQ0=3;MQRankSum=-2.047;QD=16.82;ReadPosRankSum=3.208;VQSLOD=4.9404;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:38.85:302,39,0	1/1:0,6:6:14.94:116,15,0	0/1:22,0:16:5.51:6,0,83	0/0:18,0:12:16.54:0,17,125	1/1:7,18:25:35.78:414,36,0	0/0:16,0:16:39.55:0,40,397	0/1:14,1:19:4.34:4,0,353	1/1:8,22:29:59.75:464,60,0	1/1:5,20:25:53.78:418,54,0	1/1:3,18:21:53.78:416,54,0	1/1:2,25:27:74.71:580,75,0	1/1:4,17:21:56.72:434,57,0	1/1:5,17:22:47.80:371,48,0	1/1:5,8:13:23.88:186,24,0	1/1:4,9:13:26.88:209,27,0	1/1:2,17:19:38.85:302,39,0	0/0:22,1:25:59.12:0,59,617	1/1:1,13:14:35.86:279,36,0	1/1:5,16:21:47.79:372,48,0	1/1:6,27:33:83.66:650,84,0	1/1:1,6:7:14.94:116,15,0	1/1:1,8:10:25.94:192,26,0	1/1:2,15:17:47.80:369,48,0	1/1:3,10:13:29.88:232,30,0	1/1:5,15:20:41.82:325,42,0	1/1:1,15:16:44.83:348,45,0	1/1:3,24:27:65.74:511,66,0	1/1:0,3:3:8.97:69,9,0
chr10	79597830	.	CA	C	9323.93	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.376;DP=781;FS=1.984;HRun=1;HaplotypeScore=74.6103;InbreedingCoeff=0.9970;MQ=76.30;MQ0=0;MQRankSum=-2.112;QD=38.37;ReadPosRankSum=4.390;VQSLOD=5.4966;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:40:99:1503,108,0	0/0:8,0:8:24.08:0,24,384	0/0:26,0:25:59.39:0,59,998	0/0:26,0:26:60.22:0,60,1028	0/0:29,0:29:87.24:0,87,1311	0/0:22,0:22:66.21:0,66,1030	0/0:27,0:27:81.28:0,81,1295	0/0:29,0:29:84.27:0,84,1282	1/1:0,31:31:87.29:1214,87,0	0/0:29,0:29:87.30:0,87,1388	0/0:26,0:26:78.24:0,78,1199	1/1:0,37:37:99:1498,108,0	1/1:0,39:39:99:1466,105,0	1/1:0,33:33:90.30:1254,90,0	0/0:35,0:35:99:0,105,1673	0/0:38,0:38:99:0,111,1743	0/0:21,0:21:63.21:0,63,1005	0/0:30,0:30:90.29:0,90,1406	0/0:24,0:24:72.24:0,72,1126	0/0:24,0:24:72.23:0,72,1127	0/0:26,0:26:78.24:0,78,1216	1/1:0,22:22:63.21:880,63,0	1/1:0,22:22:60.20:838,60,0	1/1:0,19:19:48.16:671,48,0	0/0:40,0:40:99:0,120,1918	0/0:27,0:27:61.29:0,61,1185	0/0:46,0:46:99:0,138,2119	0/0:5,0:5:15.05:0,15,240
chr10	79600242	.	TA	T	500.19	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.651;DP=618;FS=6.523;HRun=3;HaplotypeScore=68.2948;InbreedingCoeff=0.9890;MQ=91.63;MQ0=0;MQRankSum=-3.624;QD=27.79;ReadPosRankSum=-0.230;VQSLOD=2.3881;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.18:0,54,777	0/0:8,0:8:24.07:0,24,327	0/0:20,0:20:56.67:0,57,768	0/0:30,0:30:80.38:0,80,1106	0/0:32,0:32:87.29:0,87,1249	0/0:21,0:21:57.16:0,57,783	0/0:18,0:18:54.16:0,54,758	0/0:31,0:31:87.27:0,87,1208	0/0:20,0:20:60.20:0,60,864	0/0:28,0:28:78.25:0,78,1093	0/0:33,0:33:90.29:0,90,1280	0/0:21,0:21:63.20:0,63,889	0/0:38,0:38:99:0,108,1518	0/0:22,0:22:60.17:0,60,840	0/0:30,0:30:87.27:0,87,1205	0/0:20,0:20:42.14:0,42,605	0/0:15,0:15:45.15:0,45,648	0/0:10,0:10:27.05:0,27,365	0/0:16,0:16:48.12:0,48,662	0/0:33,0:33:90.27:0,90,1243	0/0:16,0:16:48.15:0,48,673	0/0:21,0:21:63.19:0,63,875	0/0:24,0:24:72.23:0,72,1010	0/0:15,0:15:42.10:0,42,551	1/1:0,18:18:48.15:595,48,0	0/0:25,0:25:72.24:0,72,1021	0/0:29,0:29:84.22:0,84,1133	0/0:6,0:6:18.06:0,18,259
chr10	79600314	.	TC	T	12616.59	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=12.421;DP=652;FS=2.402;HRun=1;HaplotypeScore=67.0589;InbreedingCoeff=0.9964;MQ=86.58;MQ0=0;MQRankSum=-1.103;QD=38.58;ReadPosRankSum=-0.154;VQSLOD=5.2885;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.20:0,90,1382	1/1:0,8:8:24.08:331,24,0	0/0:24,0:24:72.15:0,72,954	0/0:18,0:18:37:0,37,555	1/1:0,36:36:99:1468,108,0	0/0:28,0:28:84.29:0,84,1342	0/0:16,0:16:48.16:0,48,767	1/1:0,31:31:93.22:1196,93,0	0/0:20,0:20:60.19:0,60,933	1/1:0,28:28:84.27:1159,84,0	1/1:0,24:24:69.23:965,69,0	0/0:16,0:16:48.16:0,48,766	0/0:30,0:30:90.27:0,90,1387	0/0:33,0:33:96.31:0,96,1511	1/1:0,35:35:93.31:1301,93,0	1/1:0,25:25:63.21:881,63,0	0/0:22,0:22:63.21:0,63,1000	1/1:0,6:6:18.06:251,18,0	1/1:0,21:21:63.18:861,63,0	1/1:0,33:33:96.12:1234,96,0	1/1:0,16:16:42.14:587,42,0	0/0:23,0:23:69.22:0,69,1078	0/0:25,0:25:75.26:0,75,1195	0/0:13,0:13:39.13:0,39,620	0/0:26,0:26:78.25:0,78,1224	1/1:1,22:23:69.19:913,69,0	1/1:0,36:36:90.30:1259,90,0	1/1:0,5:5:15.05:210,15,0
chr10	79601282	.	CA	C	11048.04	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=5.487;DP=469;FS=0.000;HRun=7;HaplotypeScore=54.1519;InbreedingCoeff=0.8452;MQ=67.12;MQ0=0;MQRankSum=-2.039;QD=26.62;ReadPosRankSum=1.670;VQSLOD=5.3777;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:51.11:518,51,0	1/1:0,9:9:24.05:245,24,0	0/1:11,0:9:13.81:14,0,199	0/0:5,0:5:6.67:0,7,92	1/1:0,24:24:66.14:672,66,0	0/0:12,0:12:27.09:0,27,340	0/0:9,0:9:27.09:0,27,340	1/1:7,28:35:87.19:881,87,0	1/1:0,11:11:33.08:337,33,0	1/1:2,18:20:54.12:551,54,0	1/1:1,17:18:48.11:490,48,0	1/1:0,17:17:48.11:490,48,0	1/1:1,12:13:33.07:337,33,0	1/1:0,18:18:51.12:520,51,0	1/1:0,20:20:54.12:551,54,0	1/1:0,17:17:51.12:520,51,0	0/0:28,0:28:69.22:0,69,865	1/1:1,19:20:54:518,54,0	1/1:1,11:12:33.07:337,33,0	1/1:4,29:33:87.19:887,87,0	1/1:0,8:8:21.05:214,21,0	1/1:0,10:10:30.07:306,30,0	1/1:0,11:11:33.07:335,33,0	1/1:0,14:14:39.09:398,39,0	1/1:0,14:14:39.09:398,39,0	1/1:0,14:14:39.09:398,39,0	1/1:2,26:28:63.14:643,63,0	1/1:1,16:17:48.11:489,48,0
chr10	79601542	.	AT	A	8768	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=14.480;DP=508;FS=5.008;HRun=3;HaplotypeScore=74.2861;InbreedingCoeff=0.9960;MQ=76.65;MQ0=0;MQRankSum=-10.252;QD=32.84;ReadPosRankSum=-1.405;VQSLOD=4.6449;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:45.12:0,45,609	1/1:1,6:7:18.06:223,18,0	0/0:15,0:15:23.93:0,24,510	0/0:12,0:12:32.23:0,32,364	1/1:3,17:20:54.09:613,54,0	0/0:22,0:22:66.22:0,66,950	0/0:11,0:11:30.10:0,30,432	1/1:4,23:27:75.23:918,75,0	0/0:15,0:15:45.14:0,45,628	1/1:2,23:25:72.22:882,72,0	1/1:2,15:17:39.12:482,39,0	0/0:16,0:16:48.16:0,48,691	0/0:25,0:25:75.22:0,75,1042	0/0:25,0:25:75.25:0,75,1079	1/1:3,19:22:60.03:692,60,0	1/1:0,20:20:60.12:723,60,0	0/0:17,0:17:48.08:0,48,644	1/1:1,5:6:18:204,18,0	1/1:2,13:15:42.11:495,42,0	1/1:5,27:32:93.02:1025,93,0	1/1:1,6:7:18.06:223,18,0	0/0:18,0:18:54.18:0,54,777	0/0:15,0:15:45.14:0,45,630	0/0:14,0:14:42.14:0,42,604	0/0:20,0:20:60.14:0,60,806	1/1:3,21:23:69.20:831,69,0	1/1:4,31:35:99:1160,99,0	1/1:2,8:10:24.07:297,24,0
chr10	79601559	.	C	CT	7137.14	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=9.649;DP=504;FS=2.051;HRun=8;HaplotypeScore=79.5050;InbreedingCoeff=0.9382;MQ=79.01;MQ0=0;MQRankSum=-11.461;QD=26.83;ReadPosRankSum=-3.612;VQSLOD=3.9424;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:45.02:0,45,412	1/1:2,6:8:18.05:208,18,0	0/0:17,0:17:0.50:0,0,224	0/0:13,0:13:7.35:0,7,174	1/1:6,15:21:39.11:447,39,0	0/0:25,0:25:66.01:0,66,600	0/0:9,0:9:23.98:0,24,210	1/1:5,19:24:57.17:657,57,0	0/0:15,0:15:38.89:0,39,344	1/1:4,22:26:69.20:789,69,0	1/1:3,12:16:32.93:357,33,0	0/0:14,0:14:39:0,39,352	0/0:24,0:24:69.03:0,69,632	0/0:23,0:23:66.04:0,66,604	1/1:2,21:23:60.18:692,60,0	1/1:3,17:21:51.02:569,51,0	0/0:14,0:14:39.01:0,39,357	1/1:2,6:8:18.05:208,18,0	1/1:4,13:17:39.10:441,39,0	1/1:1,26:27:72.17:815,72,0	1/1:3,2:5:6.02:69,6,0	0/0:16,0:16:45:0,45,407	0/0:16,0:16:36.01:0,36,330	0/0:15,0:15:42.02:0,42,384	0/0:20,0:20:60.03:0,60,549	1/1:8,16:23:57.15:640,57,0	1/1:9,28:37:81.24:934,81,0	1/1:0,9:9:27.08:311,27,0
chr10	79602968	.	T	TAAAC	26134.66	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-13.643;DP=697;FS=5.796;HRun=0;HaplotypeScore=103.8436;InbreedingCoeff=0.9988;MQ=85.64;MQ0=0;MQRankSum=-7.645;QD=69.69;ReadPosRankSum=0.008;VQSLOD=6.6904;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:75.26:0,75,1487	1/1:1,11:13:30.10:830,30,0	0/0:21,0:21:63.22:0,63,1239	0/0:31,0:31:85.51:0,86,1595	1/1:3,27:31:75.21:1854,75,0	0/0:28,0:28:81.26:0,81,1582	0/0:20,0:20:60.21:0,60,1199	1/1:11,30:42:99:3262,120,0	0/0:26,0:25:72.25:0,72,1438	1/1:1,24:27:78.24:2065,78,0	1/1:6,25:32:86.89:2083,87,0	0/0:32,0:32:93.28:0,93,1753	0/0:38,0:38:99:0,111,2180	0/0:31,0:31:93.32:0,93,1855	1/1:3,21:27:63.09:1553,63,0	1/1:6,17:25:60.17:1585,60,0	0/0:17,0:17:45.15:0,45,899	1/1:1,11:13:36.12:978,36,0	1/1:2,15:17:51.18:1425,51,0	1/1:6,28:36:99:2303,102,0	1/1:2,16:18:41.93:967,42,0	0/0:18,0:18:54.19:0,54,1071	0/0:20,0:20:54.19:0,54,1079	0/0:13,0:13:33.11:0,33,659	1/1:0,17:18:51.18:1427,51,0	1/1:4,34:40:99:3116,117,0	1/1:3,24:30:81.28:2184,81,0	1/1:0,6:6:18.06:503,18,0
chr10	79603556	.	A	AATCT	1314.27	PASS	AB=0.923;AC=31;AF=0.674;AN=46;BaseQRankSum=-1.995;DP=494;FS=6.513;HRun=0;HaplotypeScore=200.8009;InbreedingCoeff=0.3465;MQ=43.40;MQ0=17;MQRankSum=-1.568;QD=3.87;ReadPosRankSum=1.044;VQSLOD=1.8179;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:14:2.70:120,0,3	1/1:6,0:4:4:10,4,0	./.	./.	1/1:28,0:27:0.30:25,0,0	0/1:7,12:19:28.65:334,0,29	0/0:9,0:9:3.01:0,3,45	1/1:29,0:23:21.29:132,21,0	0/0:18,0:17:5.99:0,6,50	1/1:16,0:14:15.36:143,15,0	1/1:18,0:14:10.70:35,11,0	0/1:14,0:14:0:0,0,0	1/1:16,0:16:0.47:1,0,0	./.	1/1:16,0:13:1.39:5,1,0	1/1:18,0:16:16.11:66,16,0	1/1:11,10:22:18.05:377,18,0	./.	0/0:10,0:7:0.35:0,0,1	1/1:17,0:15:4.17:12,4,0	0/0:14,0:13:1.82:0,2,6	0/1:22,0:22:0:0,0,0	0/0:15,0:15:0.89:0,1,2	0/1:9,0:8:0:0,0,0	1/1:35,0:31:1.21:4,1,0	1/1:21,0:19:8.38:135,8,0	1/1:19,0:18:5.02:26,5,0	./.
chr10	79603585	.	ATCTATCTATCTATCTT	A	845.77	PASS	AB=1.000;AC=21;AF=0.404;AN=52;BaseQRankSum=-5.901;DP=649;FS=12.885;HRun=0;HaplotypeScore=420.0062;InbreedingCoeff=-0.0384;MQ=38.35;MQ0=23;MQRankSum=-0.249;QD=2.01;ReadPosRankSum=-6.595;VQSLOD=0.0469;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:14:30.57:31,0,745	0/0:9,0:7:3.13:0,3,230	./.	./.	0/1:41,0:40:78.83:79,0,285	0/0:27,0:27:48.46:0,48,1933	0/0:9,0:9:12.03:0,12,377	0/1:59,0:48:44.59:45,0,877	0/0:17,0:16:8.09:0,8,562	0/1:35,0:32:26.81:27,0,1908	0/1:33,0:29:99:113,0,211	0/1:14,0:14:11.96:12,0,30	0/1:19,0:19:7.34:7,0,54	0/1:21,0:21:0.31:0,0,134	0/1:35,0:33:85.49:85,0,611	0/1:34,0:31:22.80:23,0,1271	0/0:23,0:22:35.59:0,36,1225	1/1:7,0:6:12.43:144,12,0	0/1:16,0:12:17.32:17,0,160	0/1:38,0:36:99:103,0,439	1/1:15,0:14:15.87:104,16,0	1/1:7,18:25:23.95:156,24,0	0/0:19,0:19:16.44:0,16,193	0/1:9,0:8:7.96:8,0,172	0/0:41,0:37:17.62:0,18,296	0/0:31,0:29:56.39:0,56,1676	0/0:31,0:30:31.97:0,32,1326	1/1:5,0:3:8.88:58,9,0
chr10	79603589	.	ATCTATCTATCTT	A	1920.16	PASS	AB=0.995;AC=30;AF=0.577;AN=52;BaseQRankSum=-7.392;DP=659;FS=0.000;HRun=0;HaplotypeScore=386.2446;InbreedingCoeff=-0.1416;MQ=38.74;MQ0=29;MQRankSum=-0.687;QD=3.42;ReadPosRankSum=-5.557;VQSLOD=-0.0317;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:14:30.60:31,0,611	0/0:9,0:7:3.09:0,3,186	./.	./.	0/1:42,0:41:99:121,0,178	0/0:27,0:27:48.44:0,48,1603	0/0:9,0:9:14.99:0,15,284	0/1:59,0:49:99:204,0,457	0/1:18,0:17:13.10:13,0,229	0/1:36,0:33:50.22:50,0,1308	0/1:31,0:27:99:161,0,114	1/1:2,13:15:5.88:36,6,0	1/1:3,15:18:11.87:194,12,0	1/1:1,21:22:14.81:164,15,0	0/1:34,0:32:99:129,0,388	0/1:35,0:32:76.59:77,0,843	0/0:22,0:21:33.11:0,33,1010	1/1:7,0:6:12.42:126,12,0	0/1:16,0:11:36.48:36,0,82	0/1:39,0:37:99:158,0,282	1/1:15,0:14:15.87:98,16,0	1/1:24,0:24:23.87:137,24,0	1/1:2,19:21:17.81:164,18,0	0/1:11,1:11:84.68:97,0,85	0/1:39,0:35:9.93:10,0,62	0/1:29,0:27:17.37:17,0,1102	0/1:30,0:29:7.55:8,0,929	1/1:5,0:3:8.88:58,9,0
chr10	79603593	.	ATCTATCTT	A	2544.13	PASS	AB=0.994;AC=31;AF=0.596;AN=52;BaseQRankSum=-6.759;DP=667;FS=1.198;HRun=0;HaplotypeScore=360.8701;InbreedingCoeff=-0.2308;MQ=39.26;MQ0=27;MQRankSum=0.012;QD=4.40;ReadPosRankSum=-5.386;VQSLOD=0.3394;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:14:51.61:52,0,396	0/1:10,0:8:16.94:17,0,110	./.	./.	0/1:46,0:45:99:202,0,167	0/0:27,0:27:51.11:0,51,1207	0/0:9,0:9:17.98:0,18,252	0/1:60,0:51:99:363,0,224	1/1:2,16:17:23.75:248,24,0	0/1:38,0:35:99:143,0,778	0/1:34,0:30:73.07:216,0,73	1/1:15,0:15:5.88:36,6,0	1/1:17,0:17:11.68:89,12,0	1/1:21,0:21:14.74:99,15,0	0/1:38,0:36:99:202,0,187	0/1:34,0:32:99:120,0,396	0/0:21,0:20:31.54:0,32,763	0/1:8,0:7:21.51:22,0,24	0/1:13,0:9:54.43:54,0,60	0/1:39,0:37:99:193,0,150	1/1:16,0:15:8.68:75,9,0	1/1:22,0:22:23.87:137,24,0	1/1:21,0:21:18.84:107,19,0	0/1:10,0:10:38.01:97,0,38	0/1:38,0:34:20.64:83,0,21	0/1:29,0:27:63.13:63,0,608	0/1:29,0:29:39.43:39,0,559	1/1:5,0:3:8.88:58,9,0
chr10	79603597	.	ATCTT	A	3473.16	PASS	AB=0.978;AC=32;AF=0.615;AN=52;BaseQRankSum=-4.408;DP=675;FS=0.773;HRun=0;HaplotypeScore=334.3160;InbreedingCoeff=-0.1629;MQ=39.82;MQ0=25;MQRankSum=-1.055;QD=5.96;ReadPosRankSum=-1.830;VQSLOD=0.9060;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:19:99:130,0,124	0/1:10,0:8:28.13:28,0,63	./.	./.	0/1:47,0:46:99:221,0,108	0/0:28,0:28:57.57:0,58,804	0/0:9,0:9:20.99:0,21,236	0/1:32,26:51:99:404,0,188	1/1:17,0:17:23.62:163,24,0	0/1:39,0:36:99:230,0,238	0/1:35,0:31:29.77:239,0,30	1/1:13,0:13:5.88:36,6,0	1/1:17,0:17:11.78:73,12,0	1/1:21,0:21:14.66:87,15,0	0/1:39,0:37:42.15:315,0,42	0/1:35,0:33:38.29:343,0,38	0/0:22,0:21:33.41:0,33,566	0/1:7,0:6:28.75:32,0,29	0/1:11,0:9:49.31:55,0,49	0/1:43,0:41:60.80:252,0,61	1/1:15,0:14:8.28:74,8,0	1/1:20,0:20:23.12:135,23,0	1/1:20,0:20:17.20:103,17,0	0/1:12,0:11:6.76:97,0,7	1/1:38,0:34:17.81:138,18,0	0/1:30,0:28:99:164,0,173	0/1:31,0:30:99:100,0,225	1/1:5,0:3:8.88:58,9,0
chr10	79603628	.	TTCTA	T	291.98	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=4.789;DP=709;FS=0.801;HRun=0;HaplotypeScore=326.4540;InbreedingCoeff=0.5979;MQ=48.04;MQ0=6;MQRankSum=-4.558;QD=3.95;ReadPosRankSum=-4.527;VQSLOD=1.1637;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:51.04:0,51,973	0/0:10,0:9:14.64:0,15,261	0/0:24,0:12:30.10:0,30,681	0/0:26,0:14:23.08:0,23,716	0/0:53,0:53:60.97:0,61,1322	0/0:25,0:25:63.22:0,63,1490	0/0:10,0:10:24.08:0,24,564	0/0:29,0:28:66.16:0,66,1399	0/0:17,0:17:21.03:0,21,412	0/1:40,0:40:15.45:15,0,1284	0/0:36,0:36:46.25:0,46,1062	0/0:22,0:22:33.10:0,33,750	0/0:20,0:20:21.07:0,21,497	0/0:22,0:22:18.06:0,18,395	0/0:43,0:42:74.64:0,75,1592	0/0:41,0:40:79.83:0,80,1718	0/0:21,0:21:39.60:0,40,942	0/0:9,0:9:12.26:0,12,422	0/0:7,0:5:12.04:0,12,271	0/0:41,0:41:63.29:0,63,1376	0/0:17,0:16:24.06:0,24,537	0/0:21,0:21:35.54:0,36,874	0/0:22,0:22:14.13:0,14,347	0/0:15,0:15:27.09:0,27,638	1/1:16,18:31:47.07:381,47,0	0/0:31,0:31:69.02:0,69,1229	0/0:40,0:40:68.52:0,69,1304	0/0:6,0:6:18.06:0,18,439
chr10	79604650	.	CCCTT	C	1959.10	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=8.782;DP=770;FS=1.353;HRun=0;HaplotypeScore=110.3073;InbreedingCoeff=0.7612;MQ=57.74;MQ0=13;MQRankSum=-0.340;QD=23.05;ReadPosRankSum=0.092;VQSLOD=3.3074;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,43:43:99:2054,108,0	0/0:12,0:12:36.11:0,36,920	0/0:35,0:4:12.04:0,12,315	0/1:40,0:10:0.50:0,0,620	0/0:33,0:31:90.29:0,90,2393	0/0:33,0:33:99:0,99,2710	0/0:24,0:24:69.24:0,69,1889	0/0:23,0:23:66.23:0,66,1807	0/0:32,0:32:96.30:0,96,2508	0/0:24,0:24:72.23:0,72,1863	0/0:26,0:26:78.26:0,78,2070	0/0:27,0:27:77.90:0,78,2136	0/0:36,0:36:99:0,108,2795	0/0:28,0:27:81.26:0,81,2113	0/0:34,0:34:99:0,102,2656	0/0:34,0:34:99:0,102,2718	0/0:23,0:23:66.22:0,66,1746	0/0:9,0:9:27.09:0,27,696	0/0:20,0:17:45.15:0,45,1233	0/0:40,0:39:99:0,111,3022	0/0:26,0:26:78.27:0,78,2136	0/0:21,0:21:63.22:0,63,1722	0/0:32,0:29:84.29:0,84,2245	0/0:21,0:20:60.15:0,60,1523	0/0:26,0:26:78.27:0,78,2137	0/0:34,0:34:99:0,99,2696	0/0:18,0:18:54.18:0,54,1424	0/0:14,0:13:39.13:0,39,1068
chr10	79605355	.	TAC	T	6334.94	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.991;DP=704;FS=1.574;HRun=0;HaplotypeScore=90.5116;InbreedingCoeff=0.9993;MQ=64.37;MQ0=0;MQRankSum=2.041;QD=37.93;ReadPosRankSum=6.284;VQSLOD=7.0435;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,147,2794	0/0:8,0:8:24.08:0,24,463	0/0:26,0:22:60.21:0,60,1111	0/0:32,0:21:53.35:0,53,791	0/0:18,0:18:51.17:0,51,974	0/0:21,0:21:63.20:0,63,1182	0/0:29,0:29:87.22:0,87,1546	0/0:31,0:31:87.28:0,87,1587	1/1:0,41:41:99:1606,105,0	0/0:23,0:23:69.22:0,69,1262	0/0:17,0:17:48.16:0,48,922	1/1:0,27:27:69.23:1056,69,0	1/1:0,27:27:59.98:918,60,0	1/1:2,23:25:57.19:872,57,0	0/0:29,0:29:78.24:0,78,1429	0/0:32,0:32:96.30:0,96,1776	0/0:48,0:48:99:0,138,2566	0/0:27,0:27:75.15:0,75,1326	0/0:18,0:14:36.07:0,36,626	0/0:32,0:32:90.31:0,90,1728	0/0:27,0:27:81.26:0,81,1511	1/1:0,25:25:63.21:964,63,0	1/1:1,11:12:33.11:505,33,0	1/1:1,9:10:27.09:413,27,0	0/0:10,0:10:30.10:0,30,567	0/0:15,0:15:45.15:0,45,830	0/0:27,0:27:78.25:0,78,1424	0/0:13,0:13:36.09:0,36,658
chr10	79606560	.	TGTCTA	T	11618.24	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=12.623;DP=506;FS=16.990;HRun=0;HaplotypeScore=130.7515;InbreedingCoeff=0.9941;MQ=83.45;MQ0=0;MQRankSum=-15.535;QD=55.06;ReadPosRankSum=-1.490;VQSLOD=4.2098;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.27:0,78,2468	1/1:1,7:8:21.07:447,21,0	0/0:25,0:25:72.25:0,72,2037	0/0:13,0:13:30.05:0,30,721	1/1:3,11:14:33.11:678,33,0	0/0:24,0:24:72.25:0,72,2235	0/0:16,0:16:48.16:0,48,1521	1/1:4,19:22:60.16:1215,60,0	0/0:13,0:13:36.12:0,36,1114	1/1:0,13:13:39.13:837,39,0	1/1:3,16:19:48.15:985,48,0	0/0:15,0:15:42.14:0,42,1308	0/0:22,0:22:54.19:0,54,1648	0/0:23,0:23:63.20:0,63,1834	1/1:4,19:23:60.19:1242,60,0	1/1:5,12:17:48.16:994,48,0	0/0:20,0:20:54.17:0,54,1641	1/1:2,5:7:15.05:306,15,0	1/1:1,4:5:15.04:287,15,0	1/1:2,25:27:75.26:1601,75,0	1/1:2,10:12:24.08:501,24,0	0/0:15,0:15:39.13:0,39,1192	0/0:23,0:23:63.22:0,63,1974	0/0:22,0:22:42.10:0,42,1212	0/0:34,0:34:99:0,99,2929	1/1:3,13:16:42.14:910,42,0	1/1:2,18:20:54.19:1158,54,0	1/1:0,7:7:21.07:455,21,0
chr10	79606583	.	TG	T	6093.92	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=14.029;DP=504;FS=5.099;HRun=4;HaplotypeScore=131.8057;InbreedingCoeff=0.9901;MQ=88.22;MQ0=0;MQRankSum=-14.791;QD=29.02;ReadPosRankSum=-2.608;VQSLOD=2.6051;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:72.02:0,72,914	1/1:1,7:8:21.06:251,21,0	0/0:29,0:28:59.45:0,59,964	0/0:25,0:25:69.23:0,69,949	1/1:1,16:17:36.11:428,36,0	0/0:26,0:26:78.25:0,78,1075	0/0:18,0:18:48.16:0,48,669	1/1:1,22:23:66.20:791,66,0	0/0:12,0:12:30.10:0,30,420	1/1:1,21:22:60.13:702,60,0	1/1:3,16:19:39.12:467,39,0	0/0:13,0:13:36.12:0,36,504	0/0:20,0:20:39.13:0,39,546	0/0:19,0:19:51.17:0,51,710	1/1:1,19:20:54.12:630,54,0	1/1:1,15:16:48.06:555,48,0	0/0:17,0:17:45.11:0,45,608	1/1:0,7:7:12.04:144,12,0	1/1:0,5:5:15.05:180,15,0	1/1:4,22:26:63.15:738,63,0	1/1:2,9:11:21.45:220,21,0	0/0:15,0:15:39.13:0,39,537	0/0:21,0:21:45.06:0,45,605	0/0:15,0:15:18.03:0,18,251	0/0:34,0:34:72.17:0,72,983	1/1:4,12:16:36.07:415,36,0	1/1:3,10:13:30.09:359,30,0	1/1:1,6:7:18.05:216,18,0
chr10	79606616	.	G	GACACACAC	9248.13	PASS	AC=46;AF=0.885;AN=52;BaseQRankSum=5.066;DP=577;FS=4.867;HRun=0;HaplotypeScore=238.4619;InbreedingCoeff=0.6821;MQ=57.73;MQ0=3;MQRankSum=-5.536;QD=19.85;ReadPosRankSum=-2.409;VQSLOD=3.6635;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:26:9.02:233,9,0	1/1:11,0:12:6.02:225,6,0	./.	./.	1/1:21,1:26:17.68:292,18,0	0/0:28,0:30:54.05:0,54,1145	0/0:16,0:16:18.56:0,19,483	1/1:15,0:15:12:190,12,0	1/1:10,1:17:15.05:494,15,0	1/1:24,0:25:56.98:1123,57,0	1/1:16,1:16:9:172,9,0	1/1:13,3:17:9.03:287,9,0	1/1:13,10:26:21.54:721,22,0	1/1:25,1:27:26.95:606,27,0	1/1:29,2:34:23.70:680,24,0	1/1:17,1:18:18.04:327,18,0	0/0:13,0:17:8.74:0,9,348	1/1:8,0:8:12.04:335,12,0	1/1:7,0:7:7.19:43,7,0	1/1:23,0:22:3.01:104,3,0	1/1:11,0:11:11.92:187,12,0	1/1:18,5:23:27.06:794,27,0	1/1:14,1:22:6:131,6,0	1/1:14,0:23:9.03:310,9,0	1/1:19,0:34:11.99:417,12,0	1/1:19,0:18:29.97:451,30,0	1/1:23,1:25:47.36:1100,47,0	1/1:5,0:6:2.99:24,3,0
chr10	79606879	.	A	AAT	14366.55	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-16.375;DP=626;FS=2.146;HRun=0;HaplotypeScore=74.6047;InbreedingCoeff=0.9828;MQ=85.32;MQ0=0;MQRankSum=-2.607;QD=47.89;ReadPosRankSum=0.043;VQSLOD=5.5427;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1462	1/1:1,11:12:30.10:562,30,0	0/0:24,0:24:59.40:0,59,842	0/0:17,0:17:45.64:0,46,516	1/1:1,18:19:45.15:825,45,0	0/0:21,0:21:57.18:0,57,820	0/0:27,0:27:78.25:0,78,1129	1/1:1,25:26:75.24:1361,75,0	0/0:22,0:22:63.20:0,63,908	1/1:2,16:17:42.14:786,42,0	1/1:3,5:8:15.05:261,15,0	0/0:28,0:28:81.27:0,81,1193	0/0:22,0:22:57.19:0,57,839	0/0:27,0:27:81.26:0,81,1171	1/1:2,32:34:87.30:1611,87,0	1/1:0,27:27:69.21:1293,69,0	0/0:32,0:32:93.31:0,93,1364	1/1:0,8:8:21.07:393,21,0	1/1:3,27:30:84.27:1541,84,0	1/1:0,15:16:48.16:883,48,0	1/1:0,26:26:72.25:1349,72,0	0/0:25,0:25:69.22:0,69,997	0/0:22,0:22:63.21:0,63,927	0/0:23,0:23:69.22:0,69,998	1/1:1,18:19:48.16:899,48,0	1/1:0,20:21:60.18:1087,60,0	1/1:1,31:31:75.47:1405,75,0	1/1:2,2:4:6.02:112,6,0
chr10	79607571	.	A	AT	742.62	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.871;DP=626;FS=4.291;HRun=3;HaplotypeScore=60.7121;InbreedingCoeff=0.9919;MQ=84.48;MQ0=0;MQRankSum=-4.995;QD=35.36;ReadPosRankSum=1.184;VQSLOD=4.3438;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.12:0,48,562	0/0:8,0:8:18.05:0,18,216	0/0:15,0:15:39.07:0,39,410	0/0:23,0:23:59.94:0,60,672	0/0:30,0:30:87.25:0,87,1032	0/0:28,0:28:81.23:0,81,957	0/0:13,0:13:39.12:0,39,468	0/0:36,0:36:96.26:0,96,1124	0/0:17,0:17:48.15:0,48,576	0/0:25,0:25:75.23:0,75,900	0/0:16,0:16:48.13:0,48,564	0/0:17,0:17:51.16:0,51,612	0/0:25,0:25:69.21:0,69,828	0/0:19,0:19:51.14:0,51,600	0/0:27,0:27:81.25:0,81,970	0/0:28,0:28:84.25:0,84,997	0/0:23,0:23:63.19:0,63,756	0/0:20,0:20:57.17:0,57,675	0/0:17,0:17:48.14:0,48,566	0/0:30,0:30:84.24:0,84,996	0/0:23,0:23:66.20:0,66,792	0/0:24,0:24:66.20:0,66,792	0/0:14,0:14:42.13:0,42,504	0/0:21,0:20:54.17:0,54,648	1/1:4,17:21:60.20:838,60,0	0/0:33,0:33:99:0,99,1177	0/0:37,0:37:99:0,111,1320	0/0:19,0:19:51.13:0,51,586
chr10	79607611	.	AT	A	617.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.007;DP=660;FS=0.920;HRun=1;HaplotypeScore=70.3032;InbreedingCoeff=0.9989;MQ=82.52;MQ0=0;MQRankSum=-5.240;QD=34.29;ReadPosRankSum=-0.598;VQSLOD=3.2513;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:45.15:0,45,719	0/0:9,0:9:27.09:0,27,432	0/0:23,0:23:69.22:0,69,1051	0/0:14,0:14:42.11:0,42,619	0/0:33,0:33:99:0,99,1573	0/0:31,0:31:93.32:0,93,1487	0/0:16,0:16:45.15:0,45,720	0/0:42,0:42:99:0,126,1971	0/0:16,0:16:48.16:0,48,767	0/0:28,0:28:84.28:0,84,1298	0/0:24,0:24:72.20:0,72,1072	0/0:20,0:20:60.19:0,60,933	0/0:29,0:29:84.29:0,84,1343	0/0:18,0:18:54.18:0,54,856	0/0:28,0:28:84.27:0,84,1320	0/0:29,0:29:87.28:0,87,1366	0/0:23,0:23:69.22:0,69,1079	0/0:25,0:25:75.23:0,75,1172	0/0:18,0:18:51.17:0,51,816	0/0:32,0:32:96.33:0,96,1535	0/0:23,0:23:69.22:0,69,1079	0/0:21,0:21:63.20:0,63,985	0/0:17,0:17:51.17:0,51,815	0/0:17,0:16:48.16:0,48,767	1/1:0,18:18:51.17:712,51,0	0/0:29,0:29:87.29:0,87,1369	0/0:38,0:37:99:0,114,1775	0/0:24,0:24:72.25:0,72,1150
chr10	79609311	.	AGT	A	13969.91	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=9.743;DP=665;FS=0.286;HRun=0;HaplotypeScore=97.1907;InbreedingCoeff=0.9982;MQ=89.48;MQ0=0;MQRankSum=-4.605;QD=45.06;ReadPosRankSum=0.578;VQSLOD=6.1996;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.27:0,90,1787	1/1:0,13:13:36.05:556,36,0	0/0:27,0:27:78.20:0,78,1564	0/0:29,0:29:83.42:0,83,1517	1/1:0,15:15:42.11:657,42,0	0/0:7,0:6:21.07:0,21,426	0/0:38,0:38:99:0,114,2184	1/1:0,38:38:99:1807,114,0	0/0:18,0:18:51.16:0,51,985	1/1:0,26:26:75.26:1224,75,0	1/1:0,13:13:39.13:636,39,0	0/0:25,0:25:75.26:0,75,1505	0/0:29,0:29:87.28:0,87,1697	0/0:31,0:31:93.32:0,93,1886	1/1:0,32:32:87.30:1419,87,0	1/1:0,19:19:54.18:881,54,0	0/0:39,0:39:99:0,117,2337	1/1:0,22:22:57.19:930,57,0	1/1:0,18:18:48.08:751,48,0	1/1:0,15:15:42.14:685,42,0	1/1:0,48:48:99:2055,126,0	0/0:15,0:15:45.15:0,45,912	0/0:12,0:12:36.12:0,36,714	0/0:46,0:46:99:0,138,2689	0/0:9,0:9:27.09:0,27,532	1/1:0,23:23:69.21:1099,69,0	1/1:0,21:21:60.20:978,60,0	1/1:0,7:7:18.06:294,18,0
chr10	79611529	.	GA	G	358.60	PASS	AB=0.887;AC=4;AF=0.071;AN=56;BaseQRankSum=4.511;DP=616;FS=0.734;HRun=10;HaplotypeScore=84.2583;InbreedingCoeff=0.4548;MQ=75.27;MQ0=1;MQRankSum=-0.681;QD=7.47;ReadPosRankSum=1.796;VQSLOD=1.9861;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.17:0,75,808	0/1:10,1:10:5.04:5,0,164	0/0:16,0:15:27.04:0,27,277	0/1:15,2:18:20.19:20,0,226	0/0:37,0:38:98.98:0,99,1035	0/0:17,0:17:45.10:0,45,481	0/0:20,1:21:31.10:0,31,571	0/0:39,0:39:97.81:0,98,1066	0/0:17,0:17:48.11:0,48,512	0/0:25,0:25:66.17:0,66,720	0/0:23,1:25:33.90:0,34,570	0/0:17,1:18:16.03:0,16,393	0/0:18,0:18:51.09:0,51,543	0/0:31,1:31:54.53:0,55,812	0/0:24,0:24:63.14:0,63,681	0/0:23,0:23:57.14:0,57,623	0/0:18,0:18:45.12:0,45,498	0/0:14,0:14:33.05:0,33,343	0/0:17,0:17:42.10:0,42,456	0/0:36,0:37:89.98:0,90,933	0/0:13,1:14:13.03:0,13,363	0/0:16,1:17:13.05:0,13,370	0/0:24,1:25:40.12:0,40,647	0/0:12,1:13:7.05:0,7,306	1/1:3,16:19:50.98:443,51,0	0/0:28,0:28:66.14:0,66,705	0/0:34,1:35:69.78:0,70,971	0/0:9,0:9:21.06:0,21,232
chr10	79611598	.	T	TAG	22772.83	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-8.291;DP=635;FS=1.683;HRun=0;HaplotypeScore=79.7390;InbreedingCoeff=0.9967;MQ=82.30;MQ0=1;MQRankSum=-4.567;QD=45.27;ReadPosRankSum=2.219;VQSLOD=6.4521;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:32.32:0,32,1049	1/1:2,15:16:42.14:755,42,0	0/0:19,0:19:54.18:0,54,724	0/0:22,0:21:54.13:0,54,698	1/1:2,28:30:72.25:1295,72,0	0/0:24,0:24:69.23:0,69,966	0/0:19,0:19:57.19:0,57,798	1/1:7,37:44:99:1944,111,0	1/1:0,16:16:48.16:865,48,0	1/1:1,24:25:72.16:1296,72,0	1/1:2,35:37:99:1779,99,0	1/1:1,10:11:27.09:486,27,0	1/1:2,16:18:42.14:755,42,0	1/1:2,26:28:68.78:1241,69,0	1/1:3,22:25:54.19:972,54,0	1/1:0,20:20:51.11:918,51,0	0/0:16,0:16:39.60:0,40,547	1/1:2,12:14:15.72:472,16,0	1/1:4,15:20:48.16:852,48,0	1/1:2,28:31:75.26:1349,75,0	1/1:1,18:19:54.19:973,54,0	1/1:2,17:19:42.14:755,42,0	1/1:2,18:20:48.16:863,48,0	1/1:1,9:10:27.09:486,27,0	1/1:6,27:33:84.27:1480,84,0	1/1:1,22:23:63.22:1133,63,0	1/1:1,27:28:81.28:1454,81,0	1/1:2,12:14:36.12:648,36,0
chr10	79611850	.	T	TTA	117.49	PASS	AC=2;AF=0.167;AN=12;BaseQRankSum=2.738;DP=85;FS=0.000;HRun=0;HaplotypeScore=44.1747;MQ=61.98;MQ0=30;MQRankSum=1.125;QD=9.79;ReadPosRankSum=1.762;VQSLOD=2.7490;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,7:10:18.01:197,18,0	./.	0/0:5,0:4:8.99:0,9,91	0/0:11,0:4:8.27:0,8,55	./.	0/0:17,0:17:36.03:0,36,449	0/0:3,0:2:6.02:0,6,85	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/0:15,0:11:26.99:0,27,328	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	79611862	.	TTTA	T	111.42	PASS	AC=2;AF=0.167;AN=12;BaseQRankSum=3.040;DP=97;FS=0.000;HRun=0;HaplotypeScore=37.7813;MQ=39.63;MQ0=51;MQRankSum=0.098;QD=10.13;ReadPosRankSum=1.373;VQSLOD=2.5610;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,5:7:18.66:189,19,0	./.	0/0:3,0:2:2.96:0,3,21	0/0:9,0:2:2.66:0,3,18	./.	0/0:14,0:14:33.04:0,33,610	0/0:4,0:2:5.61:0,6,72	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/0:16,0:9:24.03:0,24,398	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	79618300	.	TC	T	473.54	PASS	AC=20;AF=0.625;AN=32;BaseQRankSum=3.789;DP=189;FS=5.993;HRun=2;HaplotypeScore=36.2359;InbreedingCoeff=0.6879;MQ=105.62;MQ0=2;MQRankSum=-3.809;QD=18.21;ReadPosRankSum=-6.568;VQSLOD=1.1990;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,147,2152	./.	0/0:19,0:16:48.16:0,48,694	0/0:29,0:24:66.66:0,67,953	1/1:0,2:2:6.02:69,6,0	0/0:22,0:22:60.20:0,60,899	0/0:19,0:19:54.15:0,54,785	1/1:0,8:8:24.04:269,24,0	./.	./.	1/1:1,0:1:3:25,3,0	1/1:4,0:4:2.92:17,3,0	./.	./.	1/1:2,0:2:5.90:41,6,0	1/1:1,0:1:2.90:16,3,0	0/0:20,0:20:60.20:0,60,891	1/1:0,1:1:2.98:21,3,0	1/1:0,2:2:6.01:64,6,0	./.	./.	./.	./.	./.	./.	1/1:3,0:3:5.99:50,6,0	1/1:1,1:2:3.01:38,3,0	./.
chr10	79619451	.	GC	G	5953.71	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=18.838;DP=753;FS=0.000;HRun=1;HaplotypeScore=91.0589;InbreedingCoeff=0.9999;MQ=82.38;MQ0=0;MQRankSum=-3.197;QD=32.53;ReadPosRankSum=3.291;VQSLOD=4.5724;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.23:0,66,1052	0/0:11,0:11:33.10:0,33,504	0/0:12,0:12:36.08:0,36,547	0/0:29,0:29:81.01:0,81,1284	0/0:37,0:37:99:0,111,1737	0/0:32,0:32:96.31:0,96,1508	0/0:19,0:19:57.16:0,57,864	0/0:32,0:32:96.30:0,96,1451	1/1:1,25:26:72.21:841,72,0	0/0:38,0:38:99:0,114,1734	0/0:22,0:22:66.17:0,66,978	1/1:0,28:28:84.25:981,84,0	1/1:2,24:26:66.20:770,66,0	1/1:2,24:26:72.21:840,72,0	0/0:36,0:36:99:0,108,1702	0/0:33,0:33:99:0,99,1580	0/0:24,0:24:72.25:0,72,1150	0/0:18,0:18:54.12:0,54,808	0/0:20,0:20:60.16:0,60,891	0/0:30,0:30:87.28:0,87,1366	0/0:41,0:41:99:0,120,1893	1/1:0,29:29:81.24:946,81,0	1/1:1,25:26:75.22:876,75,0	1/1:2,20:22:60.18:701,60,0	0/0:30,0:30:90.29:0,90,1414	0/0:31,0:31:93.31:0,93,1464	0/0:34,0:34:99:0,99,1579	0/0:18,0:18:54.18:0,54,862
chr10	79620084	.	TTG	T	1383.78	PASS	AB=1.000;AC=19;AF=0.365;AN=52;BaseQRankSum=-2.086;DP=573;FS=1.275;HRun=0;HaplotypeScore=124.1028;InbreedingCoeff=0.6706;MQ=50.71;MQ0=22;MQRankSum=4.360;QD=5.89;ReadPosRankSum=2.389;VQSLOD=3.3049;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:39:2.80:14,3,0	./.	0/0:26,0:9:2.92:0,3,17	0/0:28,0:11:2.74:0,3,12	1/1:22,0:20:0.27:0,0,0	0/0:20,0:21:9.80:0,10,492	0/1:31,0:30:22.74:23,0,471	0/0:29,0:27:10.50:0,11,168	1/1:5,11:16:26.91:280,27,0	0/0:26,0:23:33.96:0,34,319	0/0:15,0:13:8.09:0,8,112	1/1:7,10:18:14.77:148,15,0	1/1:8,12:21:14.69:148,15,0	1/1:6,13:19:18.05:202,18,0	0/0:17,0:16:14.35:0,14,145	./.	0/0:29,0:29:51.23:0,51,730	0/0:15,0:15:14.38:0,14,154	0/0:22,0:19:16.67:0,17,160	0/0:10,0:8:3.01:0,3,44	0/0:22,0:21:6:0,6,55	1/1:5,13:19:26.72:255,27,0	1/1:2,9:11:14.63:145,15,0	1/1:11,27:36:31.69:346,32,0	0/0:11,0:19:2.82:0,3,25	0/0:31,0:31:58.45:0,58,559	0/0:12,0:10:15.47:0,15,149	0/0:2,0:2:0.89:0,1,2
chr10	79620802	.	CACACACACACAT	C	4861.48	PASS	AB=0.986;AC=24;AF=0.429;AN=56;BaseQRankSum=10.114;DP=506;FS=11.111;HRun=0;HaplotypeScore=207.7256;InbreedingCoeff=0.2911;MQ=54.73;MQ0=8;MQRankSum=-4.767;QD=16.76;ReadPosRankSum=1.136;VQSLOD=2.6339;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:18:46.94:122,0,47	1/1:8,0:8:15.05:288,15,0	0/0:17,0:8:14.21:0,14,181	0/0:21,0:13:23.92:0,24,202	1/1:23,0:23:8.44:244,8,0	0/0:20,0:20:54.14:0,54,2111	0/0:16,0:16:39.12:0,39,1891	0/1:29,0:28:99:256,0,177	0/1:12,0:12:0.93:374,0,1	0/1:19,0:19:30.36:375,0,30	1/1:21,0:21:22.21:359,22,0	0/0:14,0:14:36.12:0,36,908	0/0:16,0:16:39.04:0,39,823	0/0:23,0:23:51.07:0,51,1163	1/1:17,0:17:18.06:341,18,0	1/1:9,0:9:16.61:299,17,0	0/0:25,0:25:57.12:0,57,1976	0/1:14,1:15:99:195,0,234	0/1:18,0:16:44.88:317,0,45	1/1:18,0:18:20.21:291,20,0	0/1:19,0:18:25.50:92,0,25	0/0:13,0:13:21.04:0,21,448	0/0:29,0:28:50.95:0,51,1375	0/0:22,0:22:54.09:0,54,1333	0/1:17,0:17:11.89:12,0,965	0/1:12,0:12:57.71:238,0,58	1/1:20,2:22:38.43:846,38,0	0/1:11,1:12:40.07:210,0,40
chr10	79620804	.	CACACACACAT	C	7299.50	PASS	AB=0.987;AC=29;AF=0.518;AN=56;BaseQRankSum=5.552;DP=493;FS=11.148;HRun=0;HaplotypeScore=178.8749;InbreedingCoeff=0.6577;MQ=54.57;MQ0=8;MQRankSum=-5.324;QD=26.07;ReadPosRankSum=0.363;VQSLOD=3.3601;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:17:46.94:94,0,47	1/1:0,8:8:15.05:480,15,0	0/0:16,0:7:14.21:0,14,181	0/0:19,0:11:24.24:0,24,196	1/1:2,20:22:24.05:541,24,0	0/0:20,0:20:51.13:0,51,1691	0/0:15,0:15:38.61:0,39,1565	0/1:29,0:28:55.88:356,0,56	0/1:12,0:12:0.93:290,0,1	1/1:5,12:17:29.98:597,30,0	1/1:4,17:21:24.08:673,24,0	0/0:15,0:15:36.07:0,36,608	0/0:17,0:17:41.93:0,42,595	0/0:23,0:23:51.07:0,51,861	1/1:5,13:18:18.06:576,18,0	1/1:3,6:9:16.61:440,17,0	0/0:25,0:25:60.06:0,60,1585	0/1:13,1:14:99:197,0,165	1/1:5,13:16:19.81:476,20,0	1/1:6,11:17:21:519,21,0	1/1:16,0:15:23.97:222,24,0	0/0:13,0:13:21.04:0,21,321	0/0:28,0:28:53.27:0,53,1031	0/0:21,0:21:51.09:0,51,954	0/1:16,0:16:14.96:15,0,681	1/1:3,9:12:26.89:349,27,0	1/1:3,18:21:38.45:1206,38,0	1/1:4,8:12:9.03:268,9,0
chr10	79620812	.	CAT	C	2442.60	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=7.572;DP=439;FS=4.685;HRun=0;HaplotypeScore=122.4873;InbreedingCoeff=0.7017;MQ=61.66;MQ0=6;MQRankSum=-5.169;QD=10.14;ReadPosRankSum=2.092;VQSLOD=2.8814;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:10.25:0,10,64	1/1:8,0:8:14.88:104,15,0	0/0:15,0:10:23.20:0,23,258	0/0:15,0:11:28.76:0,29,248	1/1:20,0:20:13.04:87,13,0	0/0:19,0:19:7.80:0,8,451	0/0:16,0:16:44.41:0,44,584	1/1:2,17:18:10.95:317,11,0	0/0:13,0:13:12.19:0,12,58	1/1:12,0:12:29.81:220,30,0	0/1:17,0:17:12.45:100,0,12	0/0:14,0:14:17.31:0,17,92	0/0:19,0:19:43.58:0,44,314	0/0:25,0:25:30.51:0,31,246	1/1:14,0:14:17.87:126,18,0	1/1:8,0:8:11.40:82,11,0	0/1:23,0:23:15.80:16,0,337	0/1:10,0:10:11.03:105,0,11	1/1:16,0:14:21.66:254,22,0	1/1:11,0:11:15.47:103,15,0	1/1:15,0:14:26.65:219,27,0	0/1:11,0:11:1.83:2,0,82	0/0:26,0:25:34.54:0,35,257	0/0:19,0:19:21.57:0,22,212	1/1:15,4:19:27.44:392,27,0	1/1:9,0:9:26.83:199,27,0	1/1:20,0:20:38.62:268,39,0	1/1:9,0:9:8.91:61,9,0
chr10	79620952	.	G	GAAGAAGGAAGGAAGGAAGGAAGGA	47869.82	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=4.795;DP=623;FS=2.385;HRun=0;HaplotypeScore=330.5860;InbreedingCoeff=0.6894;MQ=52.39;MQ0=8;MQRankSum=-9.726;QD=88.81;ReadPosRankSum=1.574;VQSLOD=3.8240;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:16:15.37:15,0,1647	1/1:16,0:16:21.07:1450,21,0	0/0:21,0:15:18.03:0,18,487	0/0:13,0:11:5.20:0,5,197	1/1:22,0:21:27.09:1396,27,0	0/0:33,0:32:72.23:0,72,3389	0/0:17,0:17:39.12:0,39,1321	1/1:30,0:28:42.14:1483,42,0	1/1:9,0:15:24.08:1764,24,0	1/1:29,0:29:54.17:3652,54,0	1/1:28,0:27:54.19:3499,54,0	1/1:12,0:16:24.08:1487,24,0	1/1:11,0:21:30.10:1918,30,0	1/1:16,0:32:36.12:2184,36,0	1/1:22,0:24:54.19:3262,54,0	1/1:14,0:14:18.06:1342,18,0	0/1:17,0:17:99:120,0,1268	1/1:4,3:10:6.02:436,6,0	1/1:30,0:32:50.91:3219,51,0	1/1:19,0:19:24.55:1311,25,0	1/1:12,0:14:24.08:1351,24,0	1/1:8,0:20:30.06:1703,30,0	1/1:15,0:29:36.55:2055,37,0	1/1:14,0:22:9.03:491,9,0	1/1:21,0:22:48.15:3565,48,0	1/1:32,0:34:78.27:5490,78,0	1/1:17,5:36:22.32:1954,22,0	1/1:11,0:11:33.11:2721,33,0
chr10	79620963	.	G	GAAGGAAGGAAGGAAAGAAGGAAGG	47589.90	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=4.653;DP=612;FS=3.071;HRun=0;HaplotypeScore=321.7523;InbreedingCoeff=0.6853;MQ=50.52;MQ0=8;MQRankSum=-9.706;QD=89.79;ReadPosRankSum=2.820;VQSLOD=4.1765;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:17:34.28:34,0,1644	1/1:11,0:11:21.07:1450,21,0	0/0:19,0:13:17.70:0,18,487	0/0:12,0:10:5.20:0,5,197	1/1:14,9:27:30.06:1416,30,0	0/0:35,0:34:72.23:0,72,3389	0/0:16,0:16:40.37:0,40,1325	1/1:43,0:37:42.04:1483,42,0	1/1:13,0:13:24.08:1764,24,0	1/1:26,0:26:54.17:3652,54,0	1/1:27,0:25:54.19:3499,54,0	1/1:14,0:14:24.08:1487,24,0	1/1:24,0:23:30.10:1918,30,0	1/1:30,0:30:36.12:2184,36,0	1/1:24,0:24:54.19:3262,54,0	1/1:9,0:9:18.06:1342,18,0	0/1:19,0:19:99:120,0,1268	1/1:9,0:9:6.02:436,6,0	1/1:34,0:34:47.90:2965,48,0	1/1:16,0:16:24.55:1311,25,0	1/1:13,0:13:24.08:1351,24,0	1/1:16,0:16:30.06:1703,30,0	1/1:30,0:29:36.55:2055,37,0	1/1:21,0:20:9.03:492,9,0	1/1:26,0:26:48.15:3565,48,0	1/1:34,0:34:78.27:5424,78,0	1/1:34,0:34:22.32:1954,22,0	1/1:11,0:11:33.11:2721,33,0
chr10	79621322	.	GGC	G	6697.08	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=19.767;DP=574;FS=1.369;HRun=0;HaplotypeScore=149.4837;InbreedingCoeff=0.9707;MQ=80.93;MQ0=0;MQRankSum=-19.287;QD=29.76;ReadPosRankSum=1.209;VQSLOD=6.3084;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,157,3154	1/1:1,6:7:21.05:216,21,0	0/0:23,0:23:47.05:0,47,1202	0/0:19,0:19:57.19:0,57,1130	1/1:2,15:17:44.26:419,44,0	0/0:18,0:18:54.19:0,54,1097	0/0:26,0:26:78.24:0,78,1509	1/1:0,14:14:42.11:451,42,0	0/0:29,0:29:87.27:0,87,1715	1/1:1,17:19:52.69:566,53,0	1/1:1,11:12:35.91:331,36,0	0/0:28,0:28:84.27:0,84,1653	0/0:34,0:34:99:0,102,1996	0/0:26,0:26:78.24:0,78,1495	1/1:1,18:19:54.11:553,54,0	1/1:1,22:23:66.15:683,66,0	0/0:21,0:21:63.22:0,63,1280	1/1:0,2:2:6.01:63,6,0	1/1:0,11:11:33.09:359,33,0	1/1:1,15:16:48.10:483,48,0	1/1:0,15:15:41.52:394,42,0	0/0:24,0:24:72.23:0,72,1425	0/0:27,0:27:75.26:0,75,1522	0/0:22,0:22:66.23:0,66,1341	1/1:2,25:27:81.16:818,81,0	1/1:0,22:22:66.15:694,66,0	1/1:0,19:19:57.14:604,57,0	1/1:0,2:2:6.01:64,6,0
chr10	79621325	.	AG	A	2036.10	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=19.787;DP=571;FS=0.314;HRun=1;HaplotypeScore=154.9403;InbreedingCoeff=0.9663;MQ=81.69;MQ0=0;MQRankSum=-19.027;QD=9.17;ReadPosRankSum=1.772;VQSLOD=1.2033;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,159,2488	1/1:0,6:6:15.94:64,16,0	0/0:22,0:22:63.15:0,63,844	0/0:21,0:21:56.31:0,56,843	1/1:1,15:17:37.85:140,38,0	0/0:18,0:18:54.18:0,54,861	0/0:26,0:26:78.25:0,78,1223	1/1:0,14:14:38.14:166,38,0	0/0:29,0:29:87.25:0,87,1363	1/1:0,17:17:47.08:219,47,0	1/1:1,11:12:28.11:106,28,0	0/0:27,0:27:81.28:0,81,1286	0/0:33,0:33:99:0,99,1558	0/0:25,0:25:75.26:0,75,1199	1/1:1,18:19:47.84:178,48,0	1/1:1,22:23:57.94:227,58,0	0/0:21,0:21:63.21:0,63,1004	1/1:0,2:2:5.36:22,5,0	1/1:0,11:11:30.55:138,31,0	1/1:2,15:17:39.19:151,39,0	1/1:0,15:15:31.02:118,31,0	0/0:23,0:23:69.22:0,69,1049	0/0:27,0:27:78.25:0,78,1218	0/0:24,0:24:69.24:0,69,1097	1/1:0,25:25:64.81:248,65,0	1/1:1,22:23:61.54:261,62,0	1/1:0,19:19:50.49:203,50,0	1/1:0,2:2:5.54:24,6,0
chr10	79621327	.	ATTC	A	8113.26	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=19.677;DP=580;FS=1.001;HRun=0;HaplotypeScore=157.1685;InbreedingCoeff=0.9701;MQ=80.01;MQ0=0;MQRankSum=-19.022;QD=35.12;ReadPosRankSum=1.021;VQSLOD=5.6161;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,160,3758	1/1:0,6:6:18.06:228,18,0	0/0:21,0:21:54.12:0,54,1149	0/0:20,0:20:42.50:0,42,1194	1/1:1,17:19:48.11:575,48,0	0/0:18,0:18:51.18:0,51,1206	0/0:26,0:26:78.23:0,78,1706	1/1:0,14:14:42.13:538,42,0	0/0:29,0:29:87.30:0,87,2057	1/1:0,17:17:51.16:663,51,0	1/1:1,11:12:33.02:386,33,0	0/0:27,0:27:81.27:0,81,1846	0/0:33,0:33:99:0,99,2319	0/0:25,0:25:75.24:0,75,1671	1/1:1,18:19:57.14:680,57,0	1/1:2,22:25:72.21:880,72,0	0/0:22,0:22:63.22:0,63,1490	1/1:1,2:3:6.02:77,6,0	1/1:0,11:11:33.11:430,33,0	1/1:0,19:19:51.06:604,51,0	1/1:2,15:17:38.75:465,39,0	0/0:22,0:22:57.17:0,57,1257	0/0:29,0:29:81.27:0,81,1849	0/0:24,0:24:63.22:0,63,1490	1/1:0,25:25:75.24:932,75,0	1/1:1,22:23:69.22:869,69,0	1/1:0,19:19:57.18:707,57,0	1/1:0,2:2:6.02:79,6,0
chr10	79622923	.	TC	T	11754.83	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=19.780;DP=626;FS=13.808;HRun=1;HaplotypeScore=113.4058;InbreedingCoeff=0.9950;MQ=81.20;MQ0=0;MQRankSum=-2.954;QD=37.56;ReadPosRankSum=0.448;VQSLOD=3.1539;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.31:0,90,1419	1/1:0,9:9:27.09:377,27,0	0/0:17,0:17:46.97:0,47,571	0/0:20,0:20:57.63:0,58,827	1/1:0,27:27:72.12:941,72,0	0/0:27,0:27:81.28:0,81,1292	0/0:26,0:26:78.22:0,78,1176	1/1:0,23:23:69.22:945,69,0	0/0:25,0:25:75.24:0,75,1170	1/1:0,27:27:81.26:1110,81,0	1/1:0,20:20:54.15:734,54,0	0/0:18,0:18:54.18:0,54,863	0/0:23,0:23:69.21:0,69,1055	0/0:30,0:30:90.29:0,90,1414	1/1:0,23:23:63.04:792,63,0	1/1:1,25:26:24.29:916,24,0	0/0:27,0:27:81.28:0,81,1295	1/1:0,4:4:12:146,12,0	1/1:0,15:15:45.10:585,45,0	1/1:0,25:25:71.91:868,72,0	1/1:0,24:24:63.17:858,63,0	0/0:16,0:16:48.15:0,48,740	0/0:27,0:27:81.26:0,81,1267	0/0:26,0:26:78.25:0,78,1223	1/1:0,25:25:69.10:899,69,0	1/1:0,24:24:72.21:971,72,0	1/1:0,33:33:93.27:1276,93,0	1/1:0,8:8:24.08:336,24,0
chr10	79627270	.	G	GGTGT	2674.19	PASS	AB=0.860;AC=44;AF=0.846;AN=52;BaseQRankSum=2.354;DP=614;FS=0.825;HRun=0;HaplotypeScore=129.0583;InbreedingCoeff=0.4399;MQ=71.96;MQ0=7;MQRankSum=-1.824;QD=5.49;ReadPosRankSum=-2.699;VQSLOD=1.9570;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,8:36:12.03:222,12,0	1/1:15,0:15:21.06:338,21,0	./.	./.	0/1:22,0:22:38.68:82,0,39	0/0:19,0:20:15.04:0,15,214	0/0:32,0:33:30.09:0,30,440	1/1:28,0:28:18.49:151,18,0	1/1:8,0:14:3.89:28,4,0	1/1:21,0:20:21.06:278,21,0	1/1:10,5:16:2.63:70,3,0	1/1:13,0:13:5.99:49,6,0	0/1:19,0:30:22.42:22,0,79	1/1:14,0:20:5.49:24,5,0	1/1:11,0:15:5.49:25,5,0	1/1:6,0:6:3.01:44,3,0	0/0:21,0:21:30.10:0,30,466	1/1:13,6:20:5.93:91,6,0	1/1:8,0:15:14.24:109,14,0	1/1:14,4:26:8.77:153,9,0	1/1:17,10:37:8.77:154,9,0	1/1:20,0:24:20.20:153,20,0	1/1:11,0:17:11.19:55,11,0	1/1:22,1:42:27.71:182,28,0	1/1:14,1:27:12.04:218,12,0	1/1:21,0:21:15.03:167,15,0	1/1:9,8:18:11.98:167,12,0	1/1:2,0:2:3.01:43,3,0
chr10	79627449	.	TA	T	1393.10	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.702;DP=573;FS=2.143;HRun=2;HaplotypeScore=57.4010;InbreedingCoeff=0.9903;MQ=78.95;MQ0=0;MQRankSum=-4.025;QD=35.72;ReadPosRankSum=0.577;VQSLOD=4.0905;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:99:1488,108,0	0/0:10,0:10:30.10:0,30,480	0/0:14,0:14:42.14:0,42,663	0/0:13,0:13:39.09:0,39,544	0/0:28,0:28:84.27:0,84,1320	0/0:15,0:15:42.14:0,42,668	0/0:15,0:15:45.15:0,45,719	0/0:35,0:35:99:0,105,1677	0/0:11,0:11:33.11:0,33,523	0/0:32,0:32:90.29:0,90,1403	0/0:28,0:28:84.29:0,84,1336	0/0:15,0:15:42.14:0,42,665	0/0:21,0:21:63.21:0,63,996	0/0:14,0:14:42.14:0,42,667	0/0:21,0:21:63.21:0,63,1000	0/0:11,0:11:33.11:0,33,528	0/0:19,0:19:57.18:0,57,883	0/0:16,0:16:48.16:0,48,766	0/0:10,0:10:30.10:0,30,475	0/0:34,0:34:99:0,99,1581	0/0:13,0:13:39.13:0,39,623	0/0:23,0:23:69.24:0,69,1099	0/0:26,0:26:78.24:0,78,1219	0/0:20,0:20:57.19:0,57,910	0/0:37,0:37:99:0,111,1766	0/0:24,0:24:72.23:0,72,1128	0/0:23,0:23:69.23:0,69,1093	0/0:6,0:6:18.06:0,18,272
chr10	79627577	.	AT	A	5565.81	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.023;DP=620;FS=8.451;HRun=6;HaplotypeScore=64.3858;InbreedingCoeff=0.9862;MQ=75.17;MQ0=0;MQRankSum=-4.300;QD=29.45;ReadPosRankSum=3.390;VQSLOD=5.4403;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,35:37:99:1150,108,0	0/0:3,0:3:9.03:0,9,118	0/0:14,0:14:24.14:0,24,391	0/0:22,0:21:43.88:0,44,504	0/0:25,0:25:75.24:0,75,987	0/0:21,0:21:57.19:0,57,750	0/0:15,0:15:42.12:0,42,537	0/0:39,0:39:99:0,108,1371	1/1:0,21:21:63.16:677,63,0	0/0:33,0:33:90.29:0,90,1184	0/0:24,0:24:60.18:0,60,775	1/1:0,25:25:72.18:774,72,0	1/1:1,27:28:78.20:838,78,0	1/1:1,18:19:45.11:484,45,0	0/0:20,0:20:60.20:0,60,790	0/0:16,1:17:18.92:0,19,599	0/0:16,0:16:45.15:0,45,592	0/0:17,0:17:51.17:0,51,671	0/0:32,0:32:87.23:0,87,1089	0/0:26,0:26:78.24:0,78,1012	0/0:18,0:18:48.16:0,48,631	1/1:2,21:23:60.15:645,60,0	1/1:1,16:17:45.11:483,45,0	1/1:2,17:19:48.12:516,48,0	0/0:20,0:20:54.17:0,54,699	0/0:27,1:28:78.25:0,78,1026	0/0:36,0:35:99:0,102,1298	0/0:5,0:5:15.05:0,15,197
chr10	79627915	.	T	TG	1176.01	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.949;DP=745;FS=0.670;HRun=4;HaplotypeScore=71.8816;InbreedingCoeff=0.9748;MQ=67.67;MQ0=2;MQRankSum=-4.394;QD=30.15;ReadPosRankSum=0.910;VQSLOD=3.7831;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,33:39:96.24:1271,96,0	0/0:5,0:5:15.04:0,15,170	0/0:35,0:31:61.87:0,62,659	0/0:21,0:19:57.10:0,57,607	0/0:34,0:34:84.20:0,84,930	0/0:16,0:16:45.13:0,45,507	0/0:27,0:27:75.20:0,75,840	0/0:37,0:37:96.24:0,96,1058	0/0:32,0:32:90.24:0,90,1011	0/0:29,0:29:72.19:0,72,804	0/0:12,0:12:30.04:0,30,326	0/0:39,0:39:99:0,111,1241	0/0:33,0:33:90.24:0,90,1010	0/0:38,0:38:99:0,108,1224	0/0:43,0:43:99:0,120,1361	0/0:28,0:28:75.21:0,75,851	0/0:39,0:39:99:0,108,1205	0/0:11,0:11:27.08:0,27,306	0/0:15,0:15:42.10:0,42,466	0/0:19,0:19:48.13:0,48,544	0/0:47,0:47:99:0,129,1451	0/0:26,0:26:72.19:0,72,806	0/0:10,0:10:30.09:0,30,340	0/0:30,0:30:84.21:0,84,931	0/0:25,0:25:60.17:0,60,679	0/0:30,0:30:75.20:0,75,840	0/0:19,0:19:48.13:0,48,536	0/0:6,0:6:18.05:0,18,204
chr10	79629104	.	AT	A	3230.05	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.721;DP=691;FS=4.475;HRun=8;HaplotypeScore=66.5663;InbreedingCoeff=0.9997;MQ=72.59;MQ0=0;MQRankSum=-1.931;QD=23.58;ReadPosRankSum=2.578;VQSLOD=4.5289;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:87.20:0,87,1009	0/0:15,0:15:39.12:0,39,471	0/0:17,0:17:48.15:0,48,576	0/0:20,1:20:26.88:0,27,546	0/0:38,0:38:99:0,99,1172	0/0:23,0:23:69.21:0,69,833	0/0:20,0:20:57.17:0,57,688	0/0:30,0:30:75.19:0,75,888	0/0:34,0:34:90.26:0,90,1075	0/0:31,0:31:78.24:0,78,935	0/0:28,0:28:81.21:0,81,953	1/1:0,28:28:81.13:782,81,0	1/1:2,22:24:63.10:608,63,0	1/1:0,21:21:48.08:464,48,0	0/0:25,0:25:75.04:0,75,866	0/0:33,0:33:90.27:0,90,1077	0/0:24,0:24:66.20:0,66,797	0/0:16,0:17:45:0,45,521	0/0:22,0:22:60.17:0,60,714	0/0:40,0:40:99:0,114,1377	0/0:14,0:14:42.10:0,42,484	1/1:3,19:22:51.07:493,51,0	1/1:1,20:21:57.09:550,57,0	1/1:0,21:21:54.09:521,54,0	0/0:27,0:27:75.23:0,75,906	0/0:26,1:27:43.23:0,43,792	0/0:22,0:21:63.15:0,63,728	0/0:11,0:11:33.10:0,33,399
chr10	79629512	.	T	TA	12831.89	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-18.430;DP=619;FS=0.622;HRun=3;HaplotypeScore=65.9940;InbreedingCoeff=0.9990;MQ=83.98;MQ0=0;MQRankSum=-2.294;QD=37.74;ReadPosRankSum=-0.548;VQSLOD=4.9729;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.17:0,66,767	1/1:0,8:8:24.08:336,24,0	0/0:17,0:17:44.32:0,44,562	0/0:19,0:19:51.13:0,51,587	1/1:0,27:27:81.23:1111,81,0	0/0:28,0:28:78.23:0,78,924	0/0:15,0:15:45.14:0,45,540	1/1:3,22:25:66.21:907,66,0	0/0:32,0:32:96.27:0,96,1130	1/1:1,27:28:78.26:1091,78,0	1/1:2,19:21:54.14:734,54,0	0/0:19,0:19:48.13:0,48,564	0/0:32,0:32:87.27:0,87,1043	0/0:15,0:15:42.13:0,42,504	1/1:3,35:38:93.31:1302,93,0	1/1:0,20:20:48.16:672,48,0	0/0:24,0:24:69.14:0,69,809	1/1:0,13:13:33.11:462,33,0	1/1:0,18:18:54.17:741,54,0	1/1:2,42:44:99:1757,129,0	1/1:1,8:9:24.08:336,24,0	0/0:25,0:25:75.19:0,75,865	0/0:22,0:22:60.18:0,60,720	0/0:8,0:8:24.07:0,24,288	1/1:3,21:24:60.20:840,60,0	1/1:0,19:19:57.18:781,57,0	1/1:1,33:34:99:1386,99,0	1/1:1,11:12:27.09:377,27,0
chr10	79629663	.	G	GTA	5534.33	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-13.112;DP=550;FS=0.821;HRun=0;HaplotypeScore=60.5442;InbreedingCoeff=0.9991;MQ=79.29;MQ0=0;MQRankSum=-0.623;QD=41.30;ReadPosRankSum=1.377;VQSLOD=6.1359;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:30.10:0,30,389	0/0:11,0:11:30.10:0,30,390	0/0:13,0:13:30.10:0,30,387	0/0:13,0:13:36.11:0,36,452	0/0:32,0:32:78.25:0,78,1013	0/0:23,0:23:57.17:0,57,725	0/0:14,0:14:39.13:0,39,507	0/0:28,0:28:69.20:0,69,871	1/1:1,23:24:63.22:1071,63,0	0/0:23,0:23:60.19:0,60,769	0/0:18,0:18:51.17:0,51,663	1/1:2,12:14:30.10:510,30,0	1/1:2,21:23:48.03:816,48,0	1/1:1,21:22:60.21:1020,60,0	0/0:21,0:21:60.17:0,60,750	0/0:24,0:24:66.21:0,66,859	0/0:14,0:14:30.05:0,30,370	0/0:15,0:15:39.11:0,39,489	0/0:23,0:23:66.21:0,66,858	0/0:26,0:26:69.22:0,69,897	0/0:18,0:18:54.18:0,54,700	1/1:1,13:15:39.12:637,39,0	1/1:3,15:18:45.15:765,45,0	1/1:2,16:18:42.14:714,42,0	0/0:18,0:18:48.16:0,48,623	0/0:27,0:27:72.23:0,72,936	0/0:34,0:34:93.29:0,93,1196	0/0:10,0:10:24.08:0,24,312
chr10	79629923	.	A	AT	3233.06	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-9.151;DP=545;FS=2.858;HRun=9;HaplotypeScore=63.1479;InbreedingCoeff=0.9510;MQ=71.95;MQ0=0;MQRankSum=-0.323;QD=21.13;ReadPosRankSum=3.256;VQSLOD=4.4651;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:27:56.98:290,57,0	0/0:7,0:7:18:0,18,156	0/0:13,0:12:20.94:0,21,178	0/1:10,0:10:0.23:0,0,114	0/0:27,0:27:68.92:0,69,592	0/0:14,0:14:38.98:0,39,339	0/0:14,0:14:35.99:0,36,312	0/0:26,0:26:59.98:0,60,521	1/1:1,13:15:36.10:397,36,0	0/0:35,0:35:89.94:0,90,773	0/0:25,0:25:68.92:0,69,586	1/1:2,17:19:45.12:498,45,0	1/1:2,18:20:54.15:597,54,0	1/1:4,13:17:36.10:398,36,0	0/0:19,0:19:50.99:0,51,443	0/0:21,0:21:56.95:0,57,486	0/0:14,0:14:38.99:0,39,339	0/0:15,0:15:35.95:0,36,305	0/0:24,1:25:32.80:0,33,514	0/0:39,0:41:99:0,107,913	0/0:12,0:12:26.98:0,27,234	1/1:1,12:13:33.09:365,33,0	1/1:2,14:16:42.11:464,42,0	1/1:1,15:16:39.11:431,39,0	0/0:24,0:24:62.98:0,63,547	0/0:27,0:27:59.97:0,60,521	0/0:28,0:28:74.96:0,75,644	0/0:5,0:5:15:0,15,130
chr10	79630722	.	GT	G	2856.77	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=10.239;DP=241;FS=12.035;HRun=1;HaplotypeScore=46.8561;InbreedingCoeff=0.9213;MQ=57.06;MQ0=4;MQRankSum=-3.356;QD=25.28;ReadPosRankSum=-0.916;VQSLOD=1.9518;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.14:0,51,706	1/1:0,2:2:3.01:37,3,0	0/0:14,0:8:24.02:0,24,301	0/0:18,0:15:42.09:0,42,560	1/1:2,8:10:16.03:183,16,0	0/0:9,0:9:27.07:0,27,366	0/0:12,0:12:33.03:0,33,427	1/1:7,5:12:33.02:322,33,0	0/0:10,0:10:30.07:0,30,390	1/1:4,8:12:32.24:316,32,0	1/1:0,7:7:12:134,12,0	0/0:12,0:12:36.10:0,36,466	0/0:6,0:6:18.06:0,18,257	0/0:7,0:7:21.07:0,21,298	1/1:2,9:11:33.04:393,33,0	1/1:1,5:6:18.04:218,18,0	0/0:10,0:10:30.10:0,30,427	1/1:0,5:5:15.05:205,15,0	1/1:3,3:6:18.02:195,18,0	1/1:1,3:4:12.03:144,12,0	1/1:3,3:6:11.98:113,12,0	0/0:6,0:6:18.06:0,18,257	0/0:5,0:5:12.04:0,12,171	0/0:2,0:2:6.01:0,6,68	1/1:9,0:9:10.74:58,11,0	1/1:1,10:11:30.09:375,30,0	1/1:1,8:9:27.03:306,27,0	1/1:2,1:3:8.95:82,9,0
chr10	79630728	.	AGG	A	3873.88	PASS	AC=30;AF=0.556;AN=54;BaseQRankSum=11.380;DP=242;FS=4.689;HRun=4;HaplotypeScore=49.3876;InbreedingCoeff=0.9279;MQ=56.58;MQ0=5;MQRankSum=-2.286;QD=33.98;ReadPosRankSum=-1.053;VQSLOD=2.6400;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.15:0,48,932	1/1:1,2:3:8.69:79,9,0	0/0:15,0:8:24.08:0,24,444	0/0:18,0:14:36.09:0,36,682	1/1:1,8:9:15.04:194,15,0	0/0:9,0:9:27.09:0,27,548	0/0:10,0:10:24.07:0,24,450	1/1:0,12:12:30.08:414,30,0	0/0:10,0:10:30.10:0,30,609	1/1:6,9:15:44.83:476,45,0	1/1:1,7:8:8.99:111,9,0	0/0:11,0:11:33.11:0,33,670	0/0:6,0:6:18.06:0,18,366	0/0:8,0:8:24.08:0,24,468	1/1:1,9:10:30.10:466,30,0	1/1:0,5:5:15.05:228,15,0	0/0:12,0:12:36.11:0,36,691	1/1:2,5:7:21.03:299,21,0	1/1:2,3:5:15.04:203,15,0	1/1:1,3:4:12.03:166,12,0	1/1:1,5:6:14.96:170,15,0	0/0:7,0:7:21.06:0,21,390	0/0:5,0:5:12.04:0,12,244	./.	1/1:0,8:8:9.03:145,9,0	1/1:2,10:12:35.85:482,36,0	1/1:1,8:9:27.09:391,27,0	1/1:0,1:1:3.01:48,3,0
chr10	79630791	.	TA	T	2115.35	PASS	AC=28;AF=0.538;AN=52;BaseQRankSum=7.794;DP=229;FS=19.085;HRun=8;HaplotypeScore=36.7295;InbreedingCoeff=0.8791;MQ=67.07;MQ0=1;MQRankSum=-1.279;QD=19.59;ReadPosRankSum=-0.878;VQSLOD=1.7905;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:40.13:0,40,450	1/1:1,1:2:3:29,3,0	0/0:14,1:12:11.70:0,12,176	0/0:16,0:13:26.67:0,27,293	1/1:1,7:8:18.02:174,18,0	0/0:12,0:12:36.11:0,36,434	0/0:5,0:5:15.05:0,15,180	1/1:3,15:18:45.06:428,45,0	0/0:5,0:5:12.04:0,12,145	1/1:4,9:13:27.01:250,27,0	1/1:2,5:7:12.01:116,12,0	0/0:11,0:11:16.54:0,17,247	0/0:7,0:7:9.03:0,9,109	0/0:7,0:7:18.04:0,18,206	1/1:1,5:6:12.02:116,12,0	1/1:1,2:3:6.01:58,6,0	0/0:11,0:11:24.07:0,24,290	1/1:3,6:9:20.81:202,21,0	1/1:0,7:7:21.03:203,21,0	1/1:0,3:3:9.01:87,9,0	1/1:1,5:6:9.01:87,9,0	./.	0/0:3,0:3:6.02:0,6,72	./.	0/0:9,0:9:21.06:0,21,254	1/1:1,12:13:36.04:342,36,0	1/1:2,7:9:15.02:145,15,0	1/1:1,3:4:9.01:87,9,0
chr10	79631526	.	A	ACCAATT	28417.76	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-9.063;DP=673;FS=3.393;HRun=0;HaplotypeScore=141.7542;InbreedingCoeff=0.9970;MQ=78.14;MQ0=0;MQRankSum=-19.027;QD=76.39;ReadPosRankSum=-3.355;VQSLOD=5.0343;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:9,14:25:60.20:1523,60,0	1/1:3,4:8:18.06:519,18,0	0/0:20,0:20:60.15:0,60,1293	0/0:23,0:22:55.38:0,55,1118	1/1:11,27:38:71.96:1487,72,0	0/0:24,0:24:69.24:0,69,1601	0/0:21,0:21:60.19:0,60,1367	1/1:16,18:38:99:3348,102,0	0/0:21,0:21:57.20:0,57,1347	1/1:10,26:37:99:3498,108,0	1/1:2,11:15:27:650,27,0	0/0:32,0:32:90.31:0,90,2094	0/0:30,0:30:84.29:0,84,1982	0/0:29,0:29:78.25:0,78,1745	1/1:6,19:26:69.24:2313,69,0	1/1:8,24:34:90.31:2996,90,0	0/0:13,0:13:39.10:0,39,798	1/1:4,3:9:17.98:466,18,0	1/1:7,9:19:48.16:1529,48,0	1/1:4,23:28:84.21:2504,84,0	1/1:4,9:15:36.12:903,36,0	0/0:24,0:24:66.23:0,66,1526	0/0:19,0:19:54.19:0,54,1255	0/0:22,0:22:66.23:0,66,1554	0/0:23,0:23:66.23:0,66,1523	1/1:8,17:27:81.27:2711,81,0	1/1:2,32:37:96.19:3224,96,0	1/1:6,10:16:21.07:747,21,0
chr10	79632777	.	G	GA	6253.54	PASS	AB=0.732;AC=27;AF=0.482;AN=56;BaseQRankSum=-13.919;DP=565;FS=2.007;HRun=9;HaplotypeScore=56.6502;InbreedingCoeff=0.7622;MQ=73.58;MQ0=1;MQRankSum=-0.075;QD=22.49;ReadPosRankSum=-1.339;VQSLOD=5.1597;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,1:36:58.82:0,59,728	0/1:2,3:5:17.03:57,0,17	0/1:18,0:12:11.06:11,0,101	0/0:22,0:19:1.13:0,1,163	1/1:6,17:23:42.07:451,42,0	0/0:38,0:38:99:0,102,882	0/0:14,0:14:35.96:0,36,309	1/1:9,30:39:64.36:911,64,0	0/0:18,0:18:41.98:0,42,365	1/1:4,19:24:56.97:602,57,0	1/1:5,10:15:30.08:332,30,0	0/0:15,0:15:32.98:0,33,286	0/0:24,0:24:68.98:0,69,599	0/0:24,0:24:65.97:0,66,569	0/1:4,12:16:13:326,0,13	1/1:3,17:20:42.11:464,42,0	0/0:19,0:18:50.98:0,51,442	1/1:4,7:11:21.06:232,21,0	1/1:2,14:16:19.02:417,19,0	1/1:1,19:20:57.15:630,57,0	1/1:2,11:13:27.07:299,27,0	0/0:19,0:19:37.99:0,38,316	0/0:24,0:24:62.98:0,63,545	0/0:14,0:14:38.97:0,39,334	0/0:19,0:19:47.99:0,48,416	1/1:4,19:23:51.13:554,51,0	1/1:1,27:28:46.16:737,46,0	1/1:2,5:7:21.06:230,21,0
chr10	79634355	.	GAGA	G	764.16	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.907;DP=674;FS=4.250;HRun=0;HaplotypeScore=90.7570;InbreedingCoeff=0.9839;MQ=88.33;MQ0=0;MQRankSum=-3.047;QD=34.73;ReadPosRankSum=0.772;VQSLOD=4.3259;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.18:0,66,1447	0/0:13,0:13:39.13:0,39,881	0/0:28,0:28:69.26:0,69,1640	0/0:21,0:21:60.20:0,60,1246	0/0:29,0:29:84.29:0,84,1902	0/0:31,0:31:87.30:0,87,1947	0/0:28,0:28:84.29:0,84,1885	0/0:41,0:41:99:0,120,2643	0/0:24,0:24:72.25:0,72,1614	0/0:27,0:27:81.28:0,81,1810	0/0:18,0:18:51.18:0,51,1156	0/0:23,0:23:69.24:0,69,1512	0/0:28,0:28:78.24:0,78,1681	0/0:17,0:17:51.18:0,51,1148	0/0:27,0:27:78.27:0,78,1764	0/0:34,0:34:96.32:0,96,2130	0/0:15,0:15:42.12:0,42,905	0/0:6,0:6:15.05:0,15,340	0/0:12,0:12:30.10:0,30,680	0/0:41,0:41:99:0,123,2715	0/0:18,0:18:46.02:0,46,978	0/0:28,0:28:84.29:0,84,1904	0/0:23,0:23:69.24:0,69,1547	0/0:16,0:16:45.15:0,45,989	1/1:1,21:22:57.07:859,57,0	0/0:28,0:28:63.30:0,63,1816	0/0:36,0:35:99:0,102,2283	0/0:15,0:15:45.15:0,45,1019
chr10	79635435	.	C	CGTGTGTGT	12018.39	PASS	AB=0.813;AC=40;AF=0.741;AN=54;BaseQRankSum=1.016;DP=723;FS=6.880;HRun=0;HaplotypeScore=216.9213;InbreedingCoeff=0.7260;MQ=55.66;MQ0=6;MQRankSum=-5.803;QD=22.46;ReadPosRankSum=-2.900;VQSLOD=3.1083;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,3:35:8.16:310,8,0	1/1:6,4:11:10.85:314,11,0	0/0:36,0:20:6.02:0,6,146	0/1:34,0:24:0.71:4,0,1	0/0:15,3:30:0.10:0,0,1	0/0:17,0:19:26.97:0,27,554	0/0:34,0:34:51.17:0,51,1104	1/1:41,0:41:42.35:752,42,0	1/1:8,0:26:26.19:303,26,0	1/1:18,5:27:42.14:1151,42,0	1/1:12,10:23:12.04:492,12,0	1/1:9,0:21:24.08:800,24,0	1/1:14,0:22:15.05:502,15,0	1/1:20,1:28:12.51:417,13,0	1/1:9,12:24:27.09:987,27,0	1/1:19,15:37:45.15:1733,45,0	0/0:21,0:21:30.10:0,30,758	1/1:9,0:9:16.47:317,16,0	1/1:19,0:28:45.60:816,46,0	1/1:14,0:31:27.05:472,27,0	1/1:21,0:34:18.02:267,18,0	1/1:6,1:17:8.76:333,9,0	1/1:20,0:31:13.65:346,14,0	./.	0/0:15,0:31:34.94:0,35,249	1/1:13,12:26:51.17:1166,51,0	0/1:8,0:20:52.11:427,0,52	1/1:5,0:5:6.02:109,6,0
chr10	79635781	.	TA	T	388.94	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=4.419;DP=544;FS=0.994;HRun=6;HaplotypeScore=53.6210;InbreedingCoeff=0.9428;MQ=70.17;MQ0=0;MQRankSum=-1.341;QD=22.88;ReadPosRankSum=0.778;VQSLOD=2.7817;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.13:0,39,513	0/0:10,0:10:30.10:0,30,392	0/0:5,0:5:9.03:0,9,111	0/0:14,0:14:39.03:0,39,431	0/0:30,0:30:84.26:0,84,1088	0/0:21,0:21:63.20:0,63,829	0/0:13,0:13:36.10:0,36,457	0/0:38,0:38:99:0,105,1372	1/1:2,15:17:45.11:483,45,0	0/0:17,0:17:45.15:0,45,587	0/0:26,0:26:69.22:0,69,894	0/0:24,0:24:66.20:0,66,849	0/0:27,0:27:75.24:0,75,982	0/0:20,0:20:60.19:0,60,785	0/0:15,0:15:45.15:0,45,590	0/0:20,0:20:54.18:0,54,711	0/0:13,0:13:36.12:0,36,469	0/0:11,0:11:30.10:0,30,390	0/0:10,0:10:27.09:0,27,351	0/0:35,0:35:96.30:0,96,1241	0/0:15,0:15:42.12:0,42,536	0/0:17,0:17:45.14:0,45,579	0/0:20,0:20:57.18:0,57,748	0/0:15,0:15:36.10:0,36,458	0/0:23,0:23:66.17:0,66,831	0/0:32,0:32:93.29:0,93,1192	0/0:43,0:42:99:0,126,1636	./.
chr10	79638571	.	A	AGG	343.49	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=1.485;DP=359;FS=0.000;HRun=0;HaplotypeScore=81.5039;InbreedingCoeff=0.7931;MQ=67.99;MQ0=1;MQRankSum=-2.769;QD=7.99;ReadPosRankSum=0.546;VQSLOD=3.0322;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:33.07:0,33,420	0/0:9,0:9:3.01:0,3,44	0/0:7,0:5:2.98:0,3,151	0/0:5,0:4:8.94:0,9,115	0/0:17,0:17:27.08:0,27,401	0/0:18,0:18:51.16:0,51,786	0/0:9,0:9:27.06:0,27,391	0/0:38,0:37:99:0,103,1553	0/0:5,0:5:15.02:0,15,191	0/0:15,0:16:42.13:0,42,635	0/0:15,0:15:21.06:0,21,280	1/1:2,5:7:5.63:79,6,0	1/1:9,0:9:9.45:82,9,0	1/1:6,1:7:9:92,9,0	0/0:15,0:15:27.08:0,27,403	0/0:9,0:10:15:0,15,212	0/0:19,0:19:47.31:0,47,812	0/0:18,0:18:30.07:0,30,448	0/0:16,0:16:46.70:0,47,704	0/0:11,0:11:24.07:0,24,357	0/0:6,0:6:17.95:0,18,271	1/1:2,0:2:2.98:22,3,0	1/1:12,0:11:11.20:111,11,0	1/1:5,1:6:5.57:115,6,0	0/0:17,0:17:39.09:0,39,505	0/0:14,0:14:42.13:0,42,646	0/0:21,0:21:33.11:0,33,499	0/0:13,0:13:27.09:0,27,428
chr10	79638583	.	ATATG	A	5741.66	PASS	AB=1.000;AC=27;AF=0.500;AN=54;BaseQRankSum=0.941;DP=367;FS=0.000;HRun=0;HaplotypeScore=74.9247;InbreedingCoeff=0.8035;MQ=61.36;MQ0=1;MQRankSum=2.153;QD=25.41;ReadPosRankSum=1.581;VQSLOD=4.1525;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:21.01:0,21,333	./.	0/0:7,0:1:3.01:0,3,33	0/0:6,0:4:2:0,2,42	1/1:0,19:19:18.06:352,18,0	0/0:15,0:15:42.07:0,42,769	0/0:13,0:13:36.04:0,36,559	1/1:2,31:32:65.74:850,66,0	0/0:4,0:4:12.03:0,12,173	1/1:3,13:16:41.92:426,42,0	1/1:0,17:17:17.98:305,18,0	0/0:8,0:8:14.96:0,15,183	0/0:7,0:7:9.03:0,9,157	0/0:7,0:7:9.03:0,9,158	1/1:1,17:18:20.96:414,21,0	1/1:2,8:10:15.05:290,15,0	0/0:24,0:24:38.11:0,38,951	1/1:0,16:16:21.07:416,21,0	1/1:0,14:15:45.02:597,45,0	1/1:0,10:10:15.05:297,15,0	1/1:8,0:8:23.98:228,24,0	0/0:6,0:6:11.01:0,11,102	0/0:13,0:12:9.50:0,10,169	0/0:10,0:10:3.16:0,3,182	0/1:5,0:16:19.50:19,0,258	1/1:1,14:15:38.76:499,39,0	1/1:0,20:20:27.09:535,27,0	1/1:0,12:13:27.09:513,27,0
chr10	79638585	.	A	ATATG	1040.11	PASS	AB=0.895;AC=13;AF=0.241;AN=54;BaseQRankSum=-3.863;DP=376;FS=0.698;HRun=0;HaplotypeScore=95.8982;InbreedingCoeff=0.4523;MQ=60.98;MQ0=2;MQRankSum=-0.942;QD=11.96;ReadPosRankSum=1.205;VQSLOD=3.1398;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:13:18.03:18,0,49	./.	0/0:10,0:3:5.99:0,6,50	0/0:6,0:4:8.94:0,9,77	0/0:19,0:19:18.02:0,18,173	0/0:16,0:16:31.05:0,31,504	0/0:14,0:14:38.96:0,39,388	0/0:33,0:32:81.84:0,82,592	0/1:3,0:3:14.66:41,0,15	0/0:16,0:16:41.67:0,42,309	0/0:17,0:17:17.93:0,18,151	1/1:7,0:8:12.03:220,12,0	1/1:0,8:8:9.03:250,9,0	1/1:2,5:7:9.03:247,9,0	0/0:18,0:18:20.90:0,21,185	0/0:9,0:10:14.94:0,15,129	0/0:25,0:25:58.37:0,58,757	0/0:16,0:16:21.02:0,21,197	0/0:16,0:15:43.46:0,43,354	0/0:10,0:10:15.02:0,15,141	0/0:8,0:8:22.73:0,23,191	0/1:5,1:6:3.94:98,0,4	1/1:4,9:14:7.83:172,8,0	0/1:11,0:11:20.82:141,0,21	0/1:16,0:16:16.66:17,0,76	0/0:14,0:14:35.94:0,36,303	0/0:20,0:20:27.03:0,27,254	0/0:13,0:13:27.03:0,27,255
chr10	79638674	.	AT	A	83.41	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.942;DP=391;FS=1.382;HRun=8;HaplotypeScore=42.5864;InbreedingCoeff=0.8086;MQ=76.33;MQ0=0;MQRankSum=-0.719;QD=11.92;ReadPosRankSum=0.259;VQSLOD=1.9181;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.12:0,39,471	0/0:5,0:5:12.04:0,12,145	0/0:12,0:12:12:0,12,210	0/0:6,0:6:5.54:0,6,89	0/0:21,0:21:57.16:0,57,672	0/0:19,0:19:54.17:0,54,652	0/0:16,0:16:48.12:0,48,557	0/0:34,0:33:96.28:0,96,1140	1/1:0,7:7:18.03:174,18,0	0/0:17,0:17:45.13:0,45,535	0/0:17,0:17:39.12:0,39,471	0/0:6,0:6:12.04:0,12,145	0/0:8,0:8:21.06:0,21,254	0/0:7,0:7:21.06:0,21,254	0/0:20,0:20:45.14:0,45,544	0/0:17,0:17:51.16:0,51,616	0/0:18,0:18:48.15:0,48,579	0/0:19,0:19:54.17:0,54,652	0/0:18,0:18:42.12:0,42,499	0/0:18,0:18:51.11:0,51,600	0/0:9,0:9:27.07:0,27,316	0/0:12,0:12:33.10:0,33,399	0/0:11,0:11:27.08:0,27,326	0/0:12,0:12:20.98:0,21,234	0/0:12,0:12:36.11:0,36,435	0/0:13,0:13:39.11:0,39,461	0/0:15,0:15:42.09:0,42,491	0/0:9,0:9:27.08:0,27,325
chr10	79639260	.	CTTTTT	C	8302.97	PASS	AB=0.806;AC=30;AF=0.536;AN=56;BaseQRankSum=4.476;DP=479;FS=7.266;HRun=16;HaplotypeScore=104.3272;InbreedingCoeff=0.8487;MQ=66.36;MQ0=2;MQRankSum=-2.608;QD=28.43;ReadPosRankSum=7.046;VQSLOD=3.5451;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:16:38.54:0,39,433	1/1:4,5:9:8.85:140,9,0	0/0:23,0:15:34.58:0,35,430	0/1:15,0:6:10.49:10,0,62	1/1:3,12:15:29.87:432,30,0	0/0:16,0:19:42.13:0,42,1017	0/0:11,0:12:21.06:0,21,469	1/1:8,17:25:47.84:683,48,0	0/0:9,0:9:24.08:0,24,554	1/1:5,17:22:47.89:703,48,0	1/1:3,14:17:35.83:497,36,0	0/0:15,0:15:36.08:0,36,870	0/0:14,0:14:42.14:0,42,989	0/0:8,0:7:18.06:0,18,435	1/1:1,18:21:43.83:625,44,0	1/1:2,16:19:45.06:684,45,0	0/0:14,0:17:39.13:0,39,972	1/1:9,9:18:26.77:420,27,0	1/1:4,9:14:25.90:340,26,0	1/1:5,22:29:68.50:974,68,0	1/1:4,5:9:14.20:232,14,0	0/0:12,0:12:30.10:0,30,735	0/0:17,0:20:46.39:0,46,855	0/0:18,0:18:48.10:0,48,1066	1/1:3,1:12:20.37:110,20,0	1/1:2,16:18:45:668,45,0	1/1:2,36:37:96.22:1484,96,0	0/1:4,7:11:23.18:300,0,23
chr10	79640947	.	TA	T	715.71	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=9.178;DP=650;FS=5.837;HRun=8;HaplotypeScore=63.5373;InbreedingCoeff=0.6858;MQ=71.42;MQ0=0;MQRankSum=-0.851;QD=17.04;ReadPosRankSum=0.917;VQSLOD=3.5829;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.17:0,57,672	0/0:10,0:10:27.08:0,27,323	0/0:8,0:9:6.98:0,7,49	0/1:9,0:8:3.26:3,0,30	0/0:40,0:40:99:0,108,1240	0/0:33,0:33:96.27:0,96,1126	0/0:12,0:12:33.08:0,33,374	0/0:37,0:37:99:0,108,1210	0/0:23,0:23:60.17:0,60,707	0/0:23,0:23:57.16:0,57,667	0/0:33,0:33:96.28:0,96,1138	0/0:24,0:24:60.18:0,60,718	0/0:24,0:24:63.16:0,63,720	0/0:22,0:22:60.17:0,60,709	0/0:20,0:20:51.13:0,51,588	0/0:23,0:23:69.18:0,69,795	0/0:11,0:11:30.07:0,30,345	0/0:16,0:16:44.88:0,45,500	0/0:13,0:13:36.10:0,36,421	0/0:30,0:30:81.21:0,81,936	0/0:20,0:20:54.16:0,54,636	0/0:37,0:37:99:0,105,1200	0/0:40,0:40:99:0,117,1357	0/0:11,0:11:33.09:0,33,385	1/1:2,31:33:84.13:810,84,0	0/0:35,0:35:92.60:0,93,1042	0/0:27,0:26:75.21:0,75,877	0/0:13,0:13:33.09:0,33,384
chr10	79641270	.	GA	G	7728.16	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=13.121;DP=601;FS=0.654;HRun=8;HaplotypeScore=71.2863;InbreedingCoeff=0.9961;MQ=79.82;MQ0=0;MQRankSum=-2.438;QD=24.77;ReadPosRankSum=1.420;VQSLOD=5.6188;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:51.14:0,51,600	1/1:0,11:11:27.04:261,27,0	0/0:13,0:13:27.07:0,27,306	0/0:15,0:15:23.06:0,23,372	1/1:2,24:26:72.11:695,72,0	0/0:34,0:34:93.26:0,93,1102	0/0:20,0:20:57.16:0,57,676	1/1:4,22:26:66.06:622,66,0	0/0:17,0:17:45.14:0,45,544	1/1:1,26:27:78.12:753,78,0	1/1:4,17:21:48.07:463,48,0	0/0:21,0:21:57.17:0,57,679	0/0:25,0:25:72.21:0,72,856	0/0:18,0:18:51.14:0,51,604	1/1:3,35:38:99:956,99,0	1/1:1,21:22:51.08:493,51,0	0/0:22,0:22:63.16:0,63,737	1/1:1,9:10:18.02:174,18,0	1/1:2,17:19:51.08:492,51,0	1/1:3,17:20:51.08:492,51,0	1/1:2,17:19:45.07:435,45,0	0/0:20,0:20:60.17:0,60,713	0/0:23,0:23:57.17:0,57,686	0/0:19,0:19:48.15:0,48,580	0/0:2,0:21:46:0,46,234	1/1:1,30:31:90.08:850,90,0	1/1:2,34:36:93.13:898,93,0	1/1:0,6:6:15.02:145,15,0
chr10	79641851	.	G	GTTT	5242.20	PASS	AB=0.713;AC=33;AF=0.589;AN=56;BaseQRankSum=1.486;DP=624;FS=26.619;HRun=15;HaplotypeScore=108.3298;InbreedingCoeff=0.7463;MQ=78.02;MQ0=2;MQRankSum=-1.044;QD=12.72;ReadPosRankSum=-3.430;VQSLOD=-0.0041;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,1:26:24.49:180,24,0	1/1:2,10:11:24.03:372,24,0	0/1:41,0:29:7.10:7,0,196	0/0:24,0:15:6.37:0,6,47	1/1:15,2:23:43.35:518,43,0	0/0:16,0:22:27.81:0,28,289	0/0:11,0:16:17.54:0,18,153	1/1:16,0:26:27.90:284,28,0	0/1:6,0:22:16:25,0,16	1/1:14,2:32:63.03:779,63,0	1/1:9,2:22:37.18:414,37,0	0/0:9,0:14:16.23:0,16,168	0/0:23,0:24:22.05:0,22,214	0/0:11,0:18:18.89:0,19,178	1/1:10,14:28:14.70:194,15,0	1/1:6,2:20:28.25:332,28,0	0/0:18,0:19:24.52:0,25,249	1/1:3,7:11:9.01:124,9,0	1/1:14,7:24:6.64:376,7,0	1/1:10,13:30:66.30:728,66,0	1/1:1,0:4:5.98:46,6,0	0/0:28,0:33:31.93:0,32,327	0/0:20,0:24:26.78:0,27,279	0/0:15,0:18:16.94:0,17,188	0/1:6,0:21:5.05:5,0,43	1/1:15,13:32:18.55:516,19,0	1/1:9,14:28:17.96:195,18,0	1/1:2,4:8:12:147,12,0
chr10	79642061	.	T	TAGAC	1881.27	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=8.899;DP=565;FS=5.678;HRun=0;HaplotypeScore=121.4505;InbreedingCoeff=-0.0377;MQ=60.02;MQ0=5;MQRankSum=2.870;QD=9.00;ReadPosRankSum=5.173;VQSLOD=1.8974;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:21.07:512,21,0	0/0:9,0:9:27.03:0,27,268	0/0:27,0:19:47.90:0,48,683	0/0:21,0:18:40.65:0,41,514	0/0:19,0:19:31.22:0,31,370	0/0:18,0:18:45.11:0,45,747	0/0:15,0:15:39.99:0,40,661	0/1:29,0:29:21.88:22,0,421	0/1:19,0:19:68.35:182,0,68	0/0:27,0:27:65.56:0,66,665	0/0:25,0:25:2.05:0,2,439	0/1:13,0:13:68.36:185,0,68	0/1:32,0:32:99:300,0,153	0/1:18,0:16:99:126,0,101	0/0:25,0:25:17.53:0,18,601	0/0:9,0:9:20.51:0,21,223	0/0:26,0:26:66.13:0,66,1013	0/0:15,0:15:42.07:0,42,445	0/0:15,0:15:36.50:0,37,346	0/0:15,0:15:33.06:0,33,343	0/0:30,0:29:64.53:0,65,702	0/1:17,0:17:99:158,0,112	0/1:17,0:17:41.94:155,0,42	0/1:24,0:24:99:204,0,187	0/1:18,0:18:39.32:192,0,39	0/0:25,0:25:53.25:0,53,498	0/0:28,0:28:49.95:0,50,536	0/0:7,0:6:18:0,18,172
chr10	79642065	.	T	TAGAC	6191.26	PASS	AB=0.965;AC=29;AF=0.518;AN=56;BaseQRankSum=-12.491;DP=577;FS=1.309;HRun=0;HaplotypeScore=108.5052;InbreedingCoeff=0.0897;MQ=61.24;MQ0=5;MQRankSum=1.551;QD=14.40;ReadPosRankSum=-1.512;VQSLOD=4.1269;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:21.07:512,21,0	0/1:9,0:9:42.10:42,0,116	0/0:31,0:23:32.05:0,32,390	0/0:23,0:20:23.50:0,24,279	0/1:20,0:20:8:8,0,230	0/0:17,0:17:48.11:0,48,695	0/0:13,0:13:30.08:0,30,450	0/1:29,0:29:99:219,0,186	1/1:5,14:19:24.08:589,24,0	0/1:26,0:26:44.81:45,0,342	0/1:25,0:25:10:10,0,298	1/1:2,12:15:24.08:577,24,0	1/1:8,22:32:42.14:1032,42,0	0/1:3,14:18:28.94:423,0,29	0/1:29,0:29:95.18:95,0,366	0/0:9,0:9:20.97:0,21,182	0/0:24,0:24:48.08:0,48,666	0/1:16,0:16:9.75:10,0,252	0/1:16,0:16:31.34:31,0,183	0/1:14,0:14:16.12:16,0,192	0/0:30,0:29:13.79:0,14,429	1/1:3,15:18:21.07:517,21,0	1/1:3,13:17:20.85:512,21,0	1/1:6,18:26:33.10:765,33,0	1/1:3,13:16:27.09:666,27,0	0/1:25,0:25:29.24:29,0,269	0/1:29,0:29:41.04:41,0,301	0/1:7,0:6:52.97:53,0,63
chr10	79642511	.	G	GC	9359.13	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=15.415;DP=595;FS=5.148;HRun=1;HaplotypeScore=73.3284;InbreedingCoeff=0.9670;MQ=85.89;MQ0=6;MQRankSum=-4.129;QD=36.85;ReadPosRankSum=-1.499;VQSLOD=4.5357;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:81.25:0,81,1039	1/1:2,9:11:30.07:392,30,0	0/0:40,0:31:85.04:0,85,1049	0/0:37,0:28:84.19:0,84,1022	1/1:1,26:26:72.24:995,72,0	0/0:18,0:18:54.15:0,54,684	0/0:30,0:30:87.25:0,87,1100	1/1:2,22:21:60.14:782,60,0	0/0:24,0:24:69.22:0,69,895	1/1:0,20:20:60.20:798,60,0	1/1:1,9:10:18.05:249,18,0	0/0:23,0:23:66.20:0,66,843	0/0:24,0:24:72.22:0,72,920	0/0:22,0:22:66.21:0,66,856	1/1:0,31:30:93.31:1305,93,0	1/1:1,23:24:63.21:886,63,0	0/0:26,0:26:75.22:0,75,958	1/1:1,1:2:3.01:44,3,0	1/1:1,13:13:39.13:526,39,0	1/1:1,18:19:51.17:695,51,0	1/1:1,23:22:63.21:866,63,0	0/0:19,0:19:51.15:0,51,647	0/0:17,0:17:48.16:0,48,622	0/0:14,0:14:42.12:0,42,529	0/0:13,0:12:36.12:0,36,467	1/1:2,18:18:54.18:706,54,0	1/1:2,23:25:72.23:985,72,0	1/1:0,3:3:9.03:131,9,0
chr10	79642800	.	CT	C	1715.73	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.872;DP=426;FS=2.305;HRun=7;HaplotypeScore=63.7510;InbreedingCoeff=0.9718;MQ=80.50;MQ0=2;MQRankSum=-2.147;QD=20.67;ReadPosRankSum=1.055;VQSLOD=3.2267;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:72.19:0,72,876	0/0:5,0:5:15.04:0,15,176	0/0:20,0:18:38.95:0,39,374	0/0:31,0:26:13.88:0,14,356	0/0:12,0:12:30.08:0,30,365	0/0:16,0:16:42.13:0,42,522	0/0:19,0:19:54.13:0,54,642	0/0:20,0:20:30.07:0,30,362	0/0:13,0:13:34.30:0,34,400	0/0:9,0:9:18.05:0,18,217	0/0:8,0:8:18.06:0,18,226	1/1:4,15:19:45.08:454,45,0	1/1:4,14:18:42.02:414,42,0	1/1:5,7:12:26.98:255,27,0	0/0:18,0:18:48.14:0,48,591	0/0:19,0:19:32.62:0,33,451	0/0:21,0:21:54.14:0,54,653	0/0:12,0:12:27.09:0,27,339	0/0:12,0:12:28:0,28,338	0/0:9,0:9:24.08:0,24,302	0/0:26,0:26:64.42:0,64,771	1/1:2,7:9:23.37:210,23,0	1/1:2,6:8:18.04:183,18,0	1/1:1,16:17:39.04:387,39,0	0/0:10,0:10:15.93:0,16,191	0/0:13,0:12:33.11:0,33,416	0/0:16,0:16:48.12:0,48,577	0/0:3,0:3:9.03:0,9,112
chr10	79642831	.	GACACACACAC	G	3778.33	PASS	AC=14;AF=0.269;AN=52;BaseQRankSum=6.078;DP=458;FS=3.134;HRun=0;HaplotypeScore=144.8274;InbreedingCoeff=0.9140;MQ=70.09;MQ0=8;MQRankSum=-8.937;QD=38.16;ReadPosRankSum=0.870;VQSLOD=3.0522;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:26:18.06:0,18,327	0/0:6,0:6:9.03:0,9,295	./.	0/0:28,0:17:3.01:0,3,33	0/0:10,0:10:15.05:0,15,680	0/0:16,0:16:33.11:0,33,1461	0/0:23,0:22:30.10:0,30,1226	0/0:14,0:14:9.03:0,9,286	0/0:11,0:16:14.83:0,15,621	0/0:16,0:16:39.61:0,40,1703	0/0:5,0:5:9.03:0,9,397	1/1:10,6:17:21.54:607,22,0	1/1:8,6:16:24.06:610,24,0	1/1:2,11:13:26.29:707,26,0	0/0:17,0:17:27.07:0,27,1120	0/0:20,0:20:57.20:0,57,2469	0/0:18,0:22:42.14:0,42,1900	0/0:11,0:11:18.06:0,18,890	0/0:14,0:14:24.12:0,24,844	0/0:15,0:14:24.08:0,24,1103	0/0:35,0:35:63.22:0,63,2900	1/1:3,8:11:18.06:537,18,0	1/1:8,5:12:18.06:485,18,0	1/1:13,4:17:12.04:296,12,0	1/1:3,8:11:18:536,18,0	0/0:13,0:12:18.06:0,18,749	0/0:15,0:14:33.11:0,33,1429	./.
chr10	79642873	.	CAA	C	2224.44	PASS	AB=0.967;AC=18;AF=0.321;AN=56;BaseQRankSum=0.829;DP=505;FS=3.938;HRun=2;HaplotypeScore=105.2874;InbreedingCoeff=0.1856;MQ=66.57;MQ0=8;MQRankSum=1.155;QD=9.47;ReadPosRankSum=-2.668;VQSLOD=-0.2917;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:76.51:0,77,552	1/1:4,0:4:8.73:53,9,0	0/0:18,0:12:21.79:0,22,287	0/0:17,0:14:39.13:0,39,341	1/1:21,0:21:15.33:350,15,0	0/0:14,0:14:33.95:0,34,470	0/0:27,0:27:77.15:0,77,851	1/1:20,0:19:20.40:307,20,0	0/0:15,0:15:32.69:0,33,309	0/1:20,0:20:99:179,0,103	0/1:8,1:9:21.40:141,0,21	0/0:19,0:19:48.91:0,49,336	0/0:15,0:15:29.38:0,29,158	0/0:20,0:20:36.44:0,36,251	0/1:14,1:15:83.01:180,0,83	0/1:19,2:21:99:133,0,293	0/0:23,0:23:51.58:0,52,770	0/1:13,0:13:87.16:87,0,91	0/1:9,0:7:1.06:1,0,103	0/1:17,1:17:71.37:176,0,71	0/1:41,1:42:99:339,0,202	0/0:14,0:14:30.40:0,30,191	0/0:9,0:8:16.87:0,17,92	0/0:24,0:24:46.36:0,46,358	0/0:21,0:20:45.63:0,46,330	0/1:13,0:12:40.19:101,0,40	0/1:25,0:23:90.66:254,0,91	1/1:5,0:5:14.86:104,15,0
chr10	79643923	.	GTC	G	1165.94	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=3.896;DP=652;FS=0.442;HRun=0;HaplotypeScore=124.5639;InbreedingCoeff=0.4276;MQ=58.82;MQ0=11;MQRankSum=-0.435;QD=3.94;ReadPosRankSum=-1.248;VQSLOD=2.7586;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:28:9.75:172,10,0	0/0:11,0:11:20.99:0,21,214	0/0:35,0:21:20.16:0,20,498	0/0:44,0:34:73.91:0,74,915	0/0:15,0:14:20.24:0,20,159	0/0:34,0:33:65.61:0,66,1056	0/0:29,0:29:50.64:0,51,1023	0/1:33,0:32:10.60:11,0,725	0/1:24,0:24:37.44:37,0,182	0/1:28,0:27:26.14:26,0,655	0/0:19,0:19:20.62:0,21,241	1/1:16,0:16:2.58:62,3,0	1/1:13,0:13:4.30:105,4,0	1/1:29,0:28:16.77:228,17,0	0/0:17,0:16:32.57:0,33,269	0/0:28,0:28:44.13:0,44,486	0/0:30,0:30:63.12:0,63,1078	0/0:21,0:21:40.45:0,40,360	0/0:20,0:19:40.09:0,40,434	0/0:19,0:19:37.91:0,38,303	0/1:31,0:28:25.71:26,0,133	1/1:20,0:19:25.98:199,26,0	0/1:16,0:16:2.20:94,0,2	0/1:17,0:17:1.49:61,0,1	1/1:2,20:22:21.02:272,21,0	0/1:17,0:17:58.18:58,0,194	0/0:29,0:29:46.47:0,46,503	0/0:5,0:4:2.97:0,3,20
chr10	79644501	.	G	GT	3586.18	PASS	AB=0.925;AC=18;AF=0.321;AN=56;BaseQRankSum=-12.587;DP=559;FS=3.436;HRun=10;HaplotypeScore=76.9611;InbreedingCoeff=0.8218;MQ=71.41;MQ0=0;MQRankSum=-0.128;QD=16.30;ReadPosRankSum=2.537;VQSLOD=4.4148;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,16:20:14.15:336,14,0	0/0:10,0:10:26.94:0,27,217	0/0:14,0:10:8.96:0,9,72	0/0:13,0:13:9.45:0,9,131	0/0:38,0:38:92.79:0,93,754	0/0:26,0:27:67.95:0,68,548	0/0:16,0:16:29.92:0,30,241	0/1:36,4:40:11.23:11,0,529	0/0:15,0:16:37.97:0,38,301	0/0:26,0:27:67.95:0,68,547	0/0:14,0:14:34.20:0,34,274	1/1:5,15:20:26.49:486,26,0	1/1:2,10:12:27.07:288,27,0	1/1:2,27:29:69.17:736,69,0	0/0:21,0:22:52.96:0,53,425	0/0:20,0:20:50.89:0,51,410	0/0:26,0:26:65.77:0,66,523	0/0:17,0:17:47.91:0,48,390	0/1:14,1:16:0.15:0,0,178	0/0:29,0:29:68.86:0,69,566	0/0:10,0:10:26.96:0,27,222	1/1:2,13:15:36.05:371,36,0	1/1:4,21:25:45.11:480,45,0	1/1:3,15:18:36.09:384,36,0	1/1:3,22:25:7.86:495,8,0	0/0:16,0:16:29.94:0,30,246	0/0:20,1:21:18.92:0,19,355	0/0:2,0:2:3.47:0,3,26
chr10	79644640	.	G	GGT	2339.32	PASS	AB=0.840;AC=18;AF=0.333;AN=54;BaseQRankSum=-3.678;DP=561;FS=1.988;HRun=0;HaplotypeScore=137.8233;InbreedingCoeff=-0.1012;MQ=55.98;MQ0=9;MQRankSum=1.983;QD=7.47;ReadPosRankSum=-0.097;VQSLOD=3.5136;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:20.36:0,20,99	0/1:13,2:15:23.87:80,0,24	./.	0/0:20,0:11:3.01:0,3,31	0/1:15,4:19:64.54:122,0,65	0/0:23,0:27:29.57:0,30,264	0/0:25,0:27:26.71:0,27,248	0/1:32,0:32:15.97:29,0,16	1/1:11,1:16:10.57:208,11,0	0/1:19,0:20:84.89:100,0,85	0/1:17,6:23:46.21:333,0,46	0/0:12,0:12:2.84:0,3,14	0/0:11,0:11:19.89:0,20,98	0/0:21,0:21:19.89:0,20,98	0/1:10,7:18:89.36:262,0,89	0/1:11,5:16:5.71:328,0,6	0/0:24,0:27:28.72:0,29,327	1/1:8,6:13:11.83:179,12,0	0/1:23,0:22:26.72:39,0,27	0/1:15,8:23:39.52:245,0,40	0/1:18,4:17:99:191,0,100	0/0:18,0:18:8.52:0,9,42	0/0:15,0:15:2.84:0,3,14	0/0:17,0:17:5.68:0,6,28	0/0:10,0:10:5.68:0,6,28	0/1:20,6:25:14.34:76,0,14	0/1:20,5:26:20.70:105,0,21	1/1:14,4:17:3.80:203,4,0
chr10	79644641	.	GTGTGTGT	G	843.93	PASS	AB=0.718;AC=7;AF=0.125;AN=56;BaseQRankSum=7.717;DP=574;FS=2.478;HRun=0;HaplotypeScore=176.3874;InbreedingCoeff=-0.1365;MQ=53.44;MQ0=12;MQRankSum=-6.247;QD=7.96;ReadPosRankSum=2.799;VQSLOD=2.8489;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:31:51.86:0,52,1029	0/0:16,0:15:31.57:0,32,505	0/0:14,0:5:14.92:0,15,200	0/0:22,0:11:20.63:0,21,516	0/0:20,0:20:44.98:0,45,1071	0/0:27,0:27:69.23:0,69,1766	0/0:27,0:27:78.25:0,78,1882	0/0:32,0:32:90:0,90,978	0/0:17,0:16:45.15:0,45,1351	0/0:22,0:23:64.87:0,65,1339	0/0:23,0:23:59.70:0,60,1669	0/1:8,4:12:51.48:51,0,75	0/1:4,5:11:16.11:320,0,16	0/1:12,7:21:99:268,0,117	0/0:18,0:18:41.75:0,42,1360	0/0:16,0:16:37.48:0,37,993	0/0:29,0:28:75.22:0,75,2055	0/0:13,0:12:23.83:0,24,565	0/0:23,0:22:60.76:0,61,703	0/0:24,0:24:50.65:0,51,1496	0/0:23,0:18:47.81:0,48,1388	0/1:10,7:18:99:140,0,127	0/1:9,6:15:23.51:24,0,119	0/1:12,5:16:69.54:83,0,70	0/1:8,2:10:34.06:90,0,34	0/0:25,0:24:68.20:0,68,1471	0/0:26,0:26:63.66:0,64,1099	0/0:17,0:17:50.64:0,51,891
chr10	79644944	.	G	GTCTCTCTGTC	11770.40	PASS	AB=0.953;AC=36;AF=0.643;AN=56;BaseQRankSum=7.843;DP=624;FS=3.334;HRun=0;HaplotypeScore=171.1066;InbreedingCoeff=0.1965;MQ=51.70;MQ0=6;MQRankSum=-5.313;QD=22.33;ReadPosRankSum=-0.866;VQSLOD=3.8303;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:32:99:108,0,450	1/1:1,8:10:12.04:519,12,0	0/0:15,0:7:10.14:0,10,108	0/0:23,0:13:7.75:0,8,130	1/1:2,13:18:6.02:312,6,0	0/0:16,0:16:45.14:0,45,897	0/0:17,0:17:44.89:0,45,893	1/1:9,0:46:99:1988,123,0	0/1:12,0:12:7.90:8,0,402	1/1:2,17:23:54.16:1091,54,0	1/1:1,14:16:18.06:825,18,0	0/1:23,0:23:99:110,0,249	0/1:24,0:22:99:175,0,221	0/1:24,0:24:99:182,0,274	1/1:4,29:37:24.08:1250,24,0	0/1:3,19:25:40.83:304,0,41	0/0:25,0:25:60.16:0,60,1485	1/1:5,0:18:6.41:280,6,0	1/1:5,18:24:42.56:1172,43,0	1/1:3,22:24:9.03:469,9,0	1/1:2,0:18:15.05:313,15,0	0/1:18,0:18:50.04:50,0,182	0/1:13,0:13:53.67:160,0,54	0/1:25,0:25:1.12:1,0,346	0/1:17,0:17:99:117,0,328	1/1:2,23:31:78.06:1567,78,0	1/1:2,24:32:14.97:694,15,0	1/1:1,0:10:3.48:76,3,0
chr10	79644950	.	G	GTCTCTCTC	5260.92	PASS	AB=0.976;AC=31;AF=0.554;AN=56;BaseQRankSum=1.958;DP=605;FS=1.837;HRun=0;HaplotypeScore=174.5016;InbreedingCoeff=0.0106;MQ=53.03;MQ0=6;MQRankSum=-5.854;QD=10.40;ReadPosRankSum=3.143;VQSLOD=3.7715;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:29:24.08:480,24,0	0/1:10,0:10:10.07:257,0,10	1/1:17,0:8:1.81:21,2,0	0/1:24,0:10:10.49:10,0,44	0/1:20,0:19:35.01:162,0,35	0/0:16,0:17:24.08:0,24,559	0/0:16,0:18:36.07:0,36,652	0/1:44,0:43:40.06:40,0,122	0/0:2,0:14:15.04:0,15,248	0/1:23,0:23:98.07:156,0,98	0/1:16,0:15:26.93:404,0,27	1/1:7,11:20:8.75:273,9,0	1/1:8,15:24:12.44:392,12,0	1/1:9,13:26:12.04:437,12,0	0/1:32,0:32:39.86:653,0,40	0/1:21,0:21:35.94:159,0,36	0/0:19,0:21:48.12:0,48,982	0/1:18,0:18:26.93:27,0,36	0/1:20,0:20:97.93:98,0,104	1/1:21,0:20:8.90:260,9,0	0/0:17,0:16:9.86:0,10,67	1/1:19,0:19:18.01:347,18,0	1/1:6,8:14:9.03:354,9,0	0/1:14,10:26:3.92:48,0,4	1/1:10,0:18:9.03:195,9,0	0/1:31,0:31:99:164,0,156	0/1:30,0:30:31.10:323,0,31	0/0:12,0:12:9.82:0,10,70
chr10	79645471	.	G	GTT	6965.79	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-9.190;DP=406;FS=1.797;HRun=10;HaplotypeScore=53.7391;InbreedingCoeff=0.9034;MQ=71.08;MQ0=0;MQRankSum=1.140;QD=31.38;ReadPosRankSum=-2.166;VQSLOD=4.4862;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:53.86:0,54,530	1/1:2,6:12:28.55:323,29,0	0/1:12,0:10:13:13,0,90	0/0:9,0:8:8.38:0,8,69	1/1:3,17:20:51.13:728,51,0	0/0:17,0:17:48.10:0,48,488	0/0:9,0:9:24.04:0,24,244	1/1:4,21:25:66.16:918,66,0	0/0:10,0:10:30.07:0,30,305	1/1:3,20:24:59.77:837,60,0	1/1:4,13:19:44.59:594,45,0	0/0:7,0:8:14.75:0,15,134	0/0:17,0:18:47.84:0,48,469	0/0:22,0:23:47.82:0,48,540	1/1:1,7:8:18.06:268,18,0	1/1:1,8:11:17.55:232,18,0	0/0:23,0:24:50.71:0,51,557	1/1:1,4:5:12.04:179,12,0	1/1:5,13:19:42.12:589,42,0	1/1:2,15:17:45.15:656,45,0	1/1:0,4:4:12.04:179,12,0	0/0:7,0:8:19.33:0,19,203	0/0:14,0:15:41.83:0,42,409	0/0:4,0:5:11.76:0,12,103	0/0:19,0:19:54.12:0,54,549	1/1:4,11:17:38.61:525,39,0	1/1:5,15:21:42.14:611,42,0	1/1:1,7:8:21.07:313,21,0
chr10	79646993	.	AG	A	12105.35	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=13.964;DP=602;FS=1.302;HRun=1;HaplotypeScore=93.9816;InbreedingCoeff=0.9993;MQ=89.04;MQ0=0;MQRankSum=-1.302;QD=39.95;ReadPosRankSum=1.623;VQSLOD=5.2412;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1650	1/1:0,10:10:30.10:418,30,0	0/0:23,0:23:38.82:0,39,977	0/0:22,0:22:57.19:0,57,860	1/1:0,22:22:60.20:829,60,0	0/0:17,0:17:51.17:0,51,811	0/0:19,0:19:57.19:0,57,907	1/1:0,34:34:99:1358,99,0	0/0:12,0:12:36.10:0,36,548	1/1:0,18:18:54.17:734,54,0	1/1:0,8:8:24.08:336,24,0	0/0:21,0:21:63.21:0,63,1000	0/0:24,0:24:69.23:0,69,1092	0/0:19,0:19:57.19:0,57,890	1/1:0,28:28:78.26:1091,78,0	1/1:0,27:27:81.27:1133,81,0	0/0:26,0:26:72.25:0,72,1144	1/1:3,23:26:75.19:1008,75,0	1/1:0,30:30:90.27:1221,90,0	1/1:0,20:20:51.17:713,51,0	1/1:0,16:16:45.15:629,45,0	0/0:23,0:23:69.22:0,69,1066	0/0:14,0:14:42.13:0,42,640	0/0:32,0:32:96.26:0,96,1469	0/0:12,0:12:36.12:0,36,570	1/1:0,24:24:72.24:1001,72,0	1/1:0,32:32:93.31:1300,93,0	1/1:0,8:8:24.08:336,24,0
chr10	79647866	.	G	GA	9142.12	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-14.683;DP=635;FS=0.305;HRun=8;HaplotypeScore=58.1678;InbreedingCoeff=0.9273;MQ=73.55;MQ0=0;MQRankSum=0.886;QD=28.39;ReadPosRankSum=1.015;VQSLOD=5.1738;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:28:46.38:0,46,664	1/1:0,13:13:36.11:415,36,0	0/1:8,0:8:11.50:11,0,67	0/0:17,0:17:20.71:0,21,169	1/1:3,24:27:47.76:803,48,0	0/0:36,0:36:92.95:0,93,833	0/0:16,0:16:39.02:0,39,357	1/1:5,17:22:48.12:542,48,0	0/0:29,0:29:72:0,72,648	1/1:1,22:23:66.19:755,66,0	1/1:2,19:21:57.17:658,57,0	0/0:24,0:24:59.97:0,60,533	0/0:15,0:15:41.97:0,42,372	0/0:24,0:24:71.05:0,71,629	1/1:4,24:28:66.20:762,66,0	1/1:2,25:27:69.21:796,69,0	0/0:33,2:35:58.43:0,58,789	1/1:1,8:9:24.07:277,24,0	1/1:4,22:26:63.18:719,63,0	1/1:1,31:32:93.28:1073,93,0	1/1:3,12:15:13.27:358,13,0	0/0:24,0:24:63.03:0,63,576	0/0:29,0:29:75.04:0,75,685	0/0:12,0:12:36:0,36,321	0/0:24,0:24:69.04:0,69,631	1/1:5,31:36:93.15:1023,93,0	1/1:2,25:27:20.31:741,20,0	1/1:0,8:8:18.05:208,18,0
chr10	79649624	.	T	TG	8449.57	PASS	AB=0.615;AC=36;AF=0.643;AN=56;BaseQRankSum=-7.652;DP=659;FS=0.000;HRun=9;HaplotypeScore=82.1614;InbreedingCoeff=0.6856;MQ=77.98;MQ0=1;MQRankSum=-1.833;QD=18.37;ReadPosRankSum=-0.235;VQSLOD=4.7247;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:86.96:0,87,754	1/1:1,10:11:27.07:298,27,0	0/0:18,0:18:14.20:0,14,184	0/0:23,0:23:38.62:0,39,366	1/1:15,3:30:8.63:175,9,0	0/0:29,0:29:58.97:0,59,541	0/0:20,0:20:50.97:0,51,439	1/1:6,16:22:45.05:464,45,0	0/0:24,0:24:65.96:0,66,568	1/1:10,13:23:38.96:404,39,0	1/1:7,13:20:16.03:392,16,0	1/1:6,13:19:19.05:430,19,0	1/1:7,21:28:31.10:571,31,0	1/1:6,22:28:31.15:571,31,0	1/1:3,21:24:51.14:564,51,0	1/1:5,10:15:23.98:249,24,0	0/0:25,0:25:62.98:0,63,547	0/1:7,8:14:23.59:205,0,24	0/1:7,15:22:17.51:397,0,18	1/1:8,24:32:62.92:661,63,0	1/1:6,17:23:27.07:298,27,0	0/1:10,13:23:13.26:296,0,13	0/1:6,17:23:9.64:342,0,10	1/1:7,25:32:66.18:729,66,0	0/0:27,0:27:68.95:0,69,591	1/1:7,13:20:39.04:397,39,0	1/1:8,22:30:38.92:608,39,0	1/1:3,16:20:36.10:398,36,0
chr10	79650172	.	GGAT	G	9042.39	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=8.659;DP=735;FS=13.144;HRun=0;HaplotypeScore=188.6655;InbreedingCoeff=0.7217;MQ=67.11;MQ0=0;MQRankSum=-4.527;QD=13.20;ReadPosRankSum=3.041;VQSLOD=3.5478;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:18:23.73:163,24,0	1/1:4,7:11:21.03:259,21,0	1/1:30,0:28:2.01:6,2,0	0/1:19,0:16:0.35:0,0,39	1/1:15,26:41:69.03:864,69,0	0/1:32,0:32:0.65:1,0,938	0/0:9,0:16:9.03:0,9,118	1/1:35,0:35:12.04:159,12,0	1/1:11,0:23:23.81:168,24,0	1/1:8,24:32:69.14:864,69,0	1/1:9,13:22:30.01:356,30,0	1/1:10,0:28:31.17:212,31,0	1/1:9,0:32:47.62:335,48,0	1/1:3,0:26:53.57:377,54,0	1/1:14,20:35:69.18:881,69,0	1/1:11,15:27:39.09:500,39,0	0/0:24,0:24:51.16:0,51,949	0/0:10,0:10:5.65:0,6,31	1/1:18,10:28:33.11:438,33,0	1/1:15,27:42:78.09:969,78,0	1/1:13,26:39:57.19:759,57,0	1/1:16,0:36:43.08:296,43,0	1/1:7,0:24:24.53:169,25,0	1/1:7,0:15:2.98:21,3,0	1/1:7,0:27:50.37:336,50,0	1/1:13,0:26:37.60:247,38,0	1/1:13,17:29:45.15:599,45,0	1/1:4,0:7:8.93:63,9,0
chr10	79651006	.	AGCGCGCGC	A	1669.54	PASS	AB=0.871;AC=15;AF=0.268;AN=56;BaseQRankSum=0.662;DP=403;FS=16.540;HRun=0;HaplotypeScore=151.8636;InbreedingCoeff=-0.0907;MQ=69.72;MQ0=5;MQRankSum=-1.643;QD=9.07;ReadPosRankSum=2.217;VQSLOD=1.9220;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:12.04:0,12,192	0/0:7,0:7:14.94:0,15,131	0/0:22,0:14:8.29:0,8,193	0/0:21,0:11:4.28:0,4,48	0/1:17,5:22:67.76:68,0,87	0/0:22,0:22:51.18:0,51,1923	0/0:16,0:17:42.11:0,42,1300	0/1:17,4:19:29.31:299,0,29	0/0:7,0:7:12.04:0,12,393	0/1:16,2:19:99:291,0,201	1/1:16,2:18:5.84:34,6,0	0/0:9,0:9:9.03:0,9,176	0/0:6,0:7:8.95:0,9,147	0/0:9,0:9:8.96:0,9,172	0/0:12,2:15:12.01:0,12,120	0/1:8,1:9:57.68:58,0,120	0/0:23,0:24:60.21:0,60,2135	0/1:13,0:13:88.02:126,0,88	0/1:6,0:5:9.78:93,0,10	0/1:9,3:14:73.04:73,0,117	1/1:6,1:7:3.44:21,3,0	0/0:4,0:7:8.78:0,9,156	0/0:9,0:9:11.92:0,12,292	0/0:11,0:11:17.67:0,18,564	0/1:8,0:8:0.78:1,0,86	0/1:11,2:14:93.42:172,0,93	0/1:19,4:25:99:520,0,240	0/1:5,1:6:39.74:67,0,40
chr10	79651010	.	C	CGT	2038.17	PASS	AB=0.966;AC=32;AF=0.571;AN=56;BaseQRankSum=7.058;DP=382;FS=11.468;HRun=0;HaplotypeScore=116.4642;InbreedingCoeff=0.2565;MQ=70.22;MQ0=6;MQRankSum=-6.723;QD=6.98;ReadPosRankSum=-1.129;VQSLOD=2.1919;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:18.69:19,0,48	1/1:2,6:8:14.91:156,15,0	0/1:19,0:12:9.35:9,0,87	0/1:20,0:10:5.84:6,0,25	1/1:15,7:22:8.43:114,8,0	0/0:19,0:19:51.17:0,51,759	0/0:18,0:18:53.69:0,54,595	1/1:20,0:17:24.29:239,24,0	0/0:8,0:8:20.91:0,21,225	1/1:12,6:18:23.17:358,23,0	1/1:16,2:17:12.81:96,13,0	0/1:7,0:7:7.23:7,0,14	0/1:7,0:7:9.05:9,0,27	1/1:8,0:8:0.69:6,1,0	1/1:9,5:14:1.04:144,1,0	0/1:8,0:8:30.72:85,0,31	0/0:22,0:22:63.06:0,63,828	0/1:12,3:14:2.17:121,0,2	1/1:5,1:5:12.08:99,12,0	1/1:9,5:14:15.79:191,16,0	0/1:7,0:7:2.22:17,0,2	0/0:6,0:6:7.12:0,7,64	0/0:9,0:9:10.96:0,11,104	0/1:9,0:9:24.90:25,0,29	0/0:8,0:8:21.03:0,21,233	1/1:10,4:14:5.26:266,5,0	0/1:19,5:24:6.11:212,0,6	1/1:2,1:3:4.25:38,4,0
chr10	79651015	.	G	GCA	1644.29	PASS	AB=0.975;AC=26;AF=0.464;AN=56;BaseQRankSum=5.540;DP=362;FS=17.988;HRun=0;HaplotypeScore=117.8408;InbreedingCoeff=-0.0049;MQ=59.79;MQ0=6;MQRankSum=-7.504;QD=6.40;ReadPosRankSum=-0.999;VQSLOD=2.0934;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:27:6.75:25,0,7	1/1:5,0:6:15.04:183,15,0	0/1:12,0:5:18.77:19,0,48	0/0:18,0:8:0.16:0,0,8	0/1:19,1:21:11.64:59,0,12	0/0:20,0:20:57.14:0,57,790	0/0:15,0:15:45.06:0,45,558	0/1:18,0:15:11.46:100,0,11	0/0:6,0:6:18:0,18,213	0/1:17,1:19:7.96:350,0,8	1/1:18,1:17:9.23:67,9,0	0/1:8,0:8:4.85:5,0,21	0/1:7,0:7:16.95:17,0,17	0/1:9,0:9:0.95:1,0,18	0/1:14,0:14:3:120,0,3	0/1:4,1:5:35.70:36,0,41	0/0:23,0:23:62.88:0,63,807	0/1:16,0:15:2.48:120,0,2	1/1:6,0:5:7.34:76,7,0	1/1:13,0:13:8.91:176,9,0	0/1:7,0:7:2.92:15,0,3	0/0:5,0:5:1.49:0,1,44	0/0:10,0:10:5.05:0,5,69	0/1:10,0:10:7.63:8,0,46	0/0:7,0:7:18.05:0,18,216	1/1:13,0:13:0.26:212,0,0	0/1:23,0:23:19.64:173,0,20	1/1:3,0:3:1.65:44,2,0
chr10	79652676	.	TA	T	5494.27	PASS	AB=0.718;AC=28;AF=0.500;AN=56;BaseQRankSum=7.535;DP=642;FS=0.000;HRun=11;HaplotypeScore=72.7537;InbreedingCoeff=0.8321;MQ=81.15;MQ0=0;MQRankSum=-2.109;QD=16.85;ReadPosRankSum=1.093;VQSLOD=5.7013;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:36:37.10:0,37,197	1/1:1,14:15:35.96:296,36,0	0/0:25,0:25:4.66:0,5,263	0/0:15,0:15:18.57:0,19,200	1/1:4,28:32:68.83:566,69,0	0/0:25,0:26:38.40:0,38,591	0/0:17,0:17:45.10:0,45,472	1/1:10,27:38:16.89:549,17,0	0/0:17,0:17:42.08:0,42,432	1/1:7,16:23:44.93:370,45,0	1/1:4,22:26:65.91:542,66,0	0/0:20,0:22:47.98:0,48,488	0/0:33,1:35:31.61:0,32,699	0/0:24,0:24:66.15:0,66,693	1/1:4,17:22:17.98:343,18,0	0/1:5,15:20:34.81:272,0,35	0/0:20,0:35:79.74:0,80,704	1/1:3,17:20:47.93:394,48,0	1/1:2,14:17:37.94:298,38,0	1/1:1,11:12:23.93:197,24,0	1/1:3,14:17:41.94:345,42,0	0/0:25,0:25:66.15:0,66,691	0/0:23,3:26:12.97:0,13,557	0/0:11,0:11:27.07:0,27,288	0/1:16,3:19:19.81:20,0,420	1/1:4,18:22:53.92:441,54,0	1/1:3,30:33:74.91:616,75,0	1/1:0,10:10:29.97:246,30,0
chr10	79653834	.	TAC	T	197.90	PASS	AB=0.956;AC=17;AF=0.472;AN=36;BaseQRankSum=2.070;DP=437;FS=3.921;HRun=0;HaplotypeScore=56.1313;InbreedingCoeff=0.2217;MQ=75.82;MQ0=17;MQRankSum=0.778;QD=1.16;ReadPosRankSum=0.579;VQSLOD=1.3005;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/1:7,0:7:0:0,0,0	./.	./.	1/1:14,1:15:8.35:60,8,0	0/0:17,0:18:11.98:0,12,118	0/0:13,0:12:2.88:0,3,43	./.	0/0:16,0:14:6:0,6,66	0/0:10,0:10:0:0,0,0	0/0:7,0:7:0:0,0,0	1/1:13,0:13:3.01:31,3,0	./.	./.	1/1:19,0:20:5.68:41,6,0	1/1:12,0:11:3:31,3,0	0/1:24,1:25:29.79:30,0,129	0/1:7,0:9:9.32:35,0,9	./.	1/1:13,0:12:2.98:22,3,0	0/1:22,0:19:10.25:10,0,26	./.	0/1:10,0:9:0:0,0,0	1/1:19,5:25:5.85:45,6,0	0/0:14,0:12:2.88:0,3,34	./.	0/0:9,0:9:0.47:0,0,1	./.
chr10	79654284	.	TCAA	T	798.73	PASS	AB=0.924;AC=9;AF=0.161;AN=56;BaseQRankSum=1.382;DP=458;FS=3.951;HRun=0;HaplotypeScore=76.6398;InbreedingCoeff=0.0900;MQ=76.73;MQ0=0;MQRankSum=-0.432;QD=6.66;ReadPosRankSum=0.991;VQSLOD=2.2584;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:22:32.80:566,33,0	0/0:5,0:5:15.03:0,15,244	0/0:18,0:15:32.36:0,32,430	0/1:12,0:12:17.72:18,0,264	0/0:29,0:29:87.10:0,87,1375	0/0:16,0:16:42.08:0,42,762	0/0:13,0:13:38.96:0,39,567	0/0:24,0:24:72:0,72,965	0/0:15,0:15:43.55:0,44,543	0/0:24,0:24:71.96:0,72,1036	0/0:15,0:15:34.05:0,34,683	0/1:10,0:12:73.56:74,0,113	0/1:11,0:15:89.52:90,0,112	0/1:19,0:19:94.20:94,0,302	0/0:21,0:21:57.09:0,57,794	0/0:9,0:9:26.99:0,27,302	0/0:17,0:17:51.06:0,51,803	0/0:14,0:14:41.94:0,42,504	0/0:17,0:18:50.88:0,51,764	0/0:22,0:22:53.89:0,54,856	0/0:5,0:5:15.05:0,15,299	0/1:13,0:14:66.98:67,0,114	0/1:14,0:16:30.55:31,0,133	0/1:8,0:9:1.92:2,0,161	0/0:19,0:17:35.80:0,36,419	0/0:23,0:23:69.15:0,69,1174	0/0:21,0:22:61.08:0,61,783	0/0:8,0:8:21.49:0,21,386
chr10	79658661	.	T	TGAGAGAGAGAGA	14499.70	PASS	AB=0.772;AC=45;AF=0.804;AN=56;BaseQRankSum=2.555;DP=675;FS=22.737;HRun=0;HaplotypeScore=253.4661;InbreedingCoeff=0.3860;MQ=60.58;MQ0=2;MQRankSum=-9.060;QD=24.41;ReadPosRankSum=-5.628;VQSLOD=1.9482;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:32:37.71:38,0,86	1/1:6,1:7:12.04:429,12,0	0/0:35,0:26:8.10:0,8,210	0/1:38,0:23:5.73:6,0,139	1/1:25,3:27:3.95:177,4,0	0/0:19,0:22:36.11:0,36,1146	0/0:24,0:24:36.12:0,36,1049	1/1:32,0:31:32.54:1135,33,0	1/1:16,4:22:20.55:898,21,0	1/1:29,1:36:49.54:2019,50,0	1/1:19,0:22:17.94:786,18,0	0/1:9,0:16:31.76:159,0,32	1/1:12,0:22:21.06:272,21,0	1/1:14,0:22:12.51:201,13,0	1/1:23,0:26:12.65:543,13,0	1/1:19,1:23:15.05:792,15,0	0/1:26,0:29:22.30:22,0,1723	1/1:9,0:13:15.05:618,15,0	1/1:20,0:20:24.33:664,24,0	1/1:35,0:41:18.06:831,18,0	1/1:18,0:18:6:74,6,0	1/1:11,0:27:15.07:307,15,0	1/1:12,0:17:12.04:249,12,0	1/1:18,0:26:17.92:327,18,0	0/1:3,0:14:17.44:17,0,42	1/1:21,0:21:36.12:1406,36,0	1/1:19,3:27:36.16:1765,36,0	1/1:8,4:12:18.05:767,18,0
chr10	79658808	.	G	GAC	1072.13	PASS	AB=0.837;AC=18;AF=0.346;AN=52;BaseQRankSum=-3.985;DP=367;FS=0.000;HRun=0;HaplotypeScore=63.2536;InbreedingCoeff=0.2722;MQ=69.03;MQ0=10;MQRankSum=-0.837;QD=6.74;ReadPosRankSum=0.167;VQSLOD=2.8567;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:5.97:60,6,0	0/0:2,0:5:5.74:0,6,30	./.	./.	0/0:3,0:11:11.30:0,11,54	0/0:11,0:11:6.02:0,6,66	0/1:19,0:19:20.22:20,0,170	0/0:7,0:10:5.68:0,6,28	0/0:5,0:11:8.52:0,9,42	0/0:8,0:10:2.52:0,3,13	0/0:3,0:8:11.36:0,11,56	1/1:10,2:12:6.02:90,6,0	1/1:3,3:6:6.02:90,6,0	0/1:5,6:10:41.59:120,0,42	0/0:10,0:10:0.47:0,0,1	0/0:4,0:10:11.36:0,11,56	0/0:20,0:22:12.79:0,13,303	0/1:7,0:10:26.91:27,0,54	1/1:8,0:8:0.85:2,1,0	0/1:3,0:5:0:0,0,0	0/0:13,0:23:5.68:0,6,28	0/1:12,11:23:42.39:247,0,42	0/1:8,5:14:9.31:154,0,9	1/1:9,9:18:21.07:316,21,0	1/1:7,2:12:9.01:97,9,0	0/0:4,0:9:8.52:0,9,42	0/0:6,0:11:2.64:0,3,14	0/0:0,0:2:2.84:0,3,14
chr10	79660107	.	C	CA	13345.05	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-2.652;DP=613;FS=3.331;HRun=8;HaplotypeScore=68.7472;InbreedingCoeff=0.8162;MQ=69.44;MQ0=1;MQRankSum=0.077;QD=24.00;ReadPosRankSum=2.596;VQSLOD=5.8134;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:35:87.26:1004,87,0	1/1:1,14:15:42.12:485,42,0	0/1:12,0:11:10.76:11,0,141	0/0:9,0:9:1.43:0,1,24	1/1:0,27:27:78.19:885,78,0	0/0:10,0:10:30.02:0,30,275	0/0:16,0:16:41.99:0,42,374	1/1:8,22:30:69.17:774,69,0	1/1:1,17:18:48.14:554,48,0	1/1:7,23:30:72.21:831,72,0	1/1:3,27:29:78.19:885,78,0	1/1:4,0:22:48.29:245,48,0	1/1:6,0:35:76.64:388,77,0	1/1:4,0:23:42.65:217,43,0	1/1:2,21:23:57.17:658,57,0	1/1:0,20:20:57.17:658,57,0	0/0:22,0:22:60.02:0,60,549	1/1:1,12:13:33.10:381,33,0	1/1:3,19:22:57.15:646,57,0	1/1:3,34:37:99:1128,99,0	1/1:1,9:10:24.07:277,24,0	1/1:4,0:26:59.78:309,60,0	1/1:3,2:20:45.78:256,46,0	1/1:1,0:18:39.77:202,40,0	1/1:2,24:26:63.19:727,63,0	1/1:2,19:21:57.15:647,57,0	1/1:3,26:29:63.19:727,63,0	1/1:0,13:13:39.12:450,39,0
chr10	79667348	.	AT	A	199.69	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.056;DP=300;FS=4.519;HRun=1;HaplotypeScore=105.4404;InbreedingCoeff=0.8126;MQ=46.51;MQ0=0;MQRankSum=-2.198;QD=18.15;ReadPosRankSum=-0.972;VQSLOD=3.5831;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:11:26.98:294,27,0	0/0:10,0:10:30.10:0,30,472	0/0:6,0:5:14.76:0,15,175	0/0:5,0:3:9.03:0,9,142	0/0:14,0:14:41.72:0,42,607	0/0:6,0:6:18.06:0,18,286	0/0:10,0:10:27.07:0,27,403	0/0:18,0:16:45.10:0,45,663	0/0:12,0:12:36.12:0,36,568	0/0:14,0:14:42.14:0,42,650	0/0:7,0:6:18.06:0,18,286	0/0:15,0:15:42.14:0,42,663	0/0:9,0:9:21.07:0,21,334	0/0:8,0:8:24.06:0,24,357	0/0:15,0:15:45.15:0,45,704	0/0:15,0:15:45.15:0,45,710	0/0:11,0:11:23.98:0,24,328	0/0:4,0:4:9.03:0,9,142	0/0:12,0:12:35.92:0,36,494	0/0:13,0:13:36.12:0,36,572	0/0:12,0:12:30.10:0,30,478	0/0:11,0:11:33.11:0,33,518	0/0:13,0:13:39.12:0,39,597	0/0:4,0:4:9.03:0,9,142	0/0:12,0:12:36.12:0,36,567	0/0:11,0:11:33.11:0,33,526	0/0:16,0:16:48.16:0,48,757	0/0:6,0:6:18.05:0,18,263
chr10	79667912	.	CT	C	2748.96	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-8.706;DP=568;FS=15.528;HRun=7;HaplotypeScore=96.2974;InbreedingCoeff=0.9901;MQ=85.89;MQ0=0;MQRankSum=-2.260;QD=25.45;ReadPosRankSum=2.835;VQSLOD=2.5406;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:38.96:0,39,122	0/0:5,0:5:14.95:0,15,116	0/0:21,0:21:36.12:0,36,519	0/0:17,0:17:40.32:0,40,453	0/0:23,0:23:53.88:0,54,436	0/0:20,0:20:54.17:0,54,677	0/0:6,0:6:12.04:0,12,151	0/0:23,0:23:59.46:0,59,414	0/0:17,0:17:45.13:0,45,552	0/0:34,0:34:97.98:0,98,682	0/0:28,0:27:71.62:0,72,565	1/1:1,10:11:27.06:275,27,0	1/1:0,21:21:60.14:612,60,0	1/1:4,13:17:39.09:398,39,0	0/0:28,0:28:77.74:0,78,615	0/0:23,0:23:59.76:0,60,490	0/0:22,0:22:63.20:0,63,791	0/0:14,0:14:38.85:0,39,302	0/0:22,0:22:56.54:0,57,406	0/0:34,0:34:92.60:0,93,726	0/0:12,0:12:29.89:0,30,231	1/1:1,19:20:57.13:582,57,0	1/1:1,20:21:57.07:580,57,0	1/1:2,16:18:48.11:490,48,0	0/0:28,0:28:75.22:0,75,924	0/0:12,0:12:32.74:0,33,231	0/0:17,0:17:47.81:0,48,379	0/0:20,0:20:47.90:0,48,389
chr10	79667919	.	TGTG	T	1160.12	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.738;DP=552;FS=8.101;HRun=0;HaplotypeScore=120.6104;InbreedingCoeff=0.9686;MQ=88.55;MQ0=0;MQRankSum=-4.020;QD=40.00;ReadPosRankSum=0.749;VQSLOD=4.4384;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:77.92:1255,78,0	0/0:5,0:5:15.05:0,15,344	0/0:24,0:24:64.94:0,65,1150	0/0:17,0:17:48.07:0,48,940	0/0:19,0:19:57.20:0,57,1235	0/0:19,0:19:57.15:0,57,1253	0/0:5,0:5:15.05:0,15,343	0/0:24,0:24:72.22:0,72,1454	0/0:16,0:16:48.16:0,48,1063	0/0:35,0:35:99:0,105,2310	0/0:29,0:28:81.26:0,81,1771	0/0:12,0:12:33.11:0,33,491	0/0:21,0:21:60.20:0,60,857	0/0:15,0:15:45.15:0,45,673	0/0:28,0:28:84.29:0,84,1885	0/0:21,0:21:63.19:0,63,1352	0/0:22,0:22:66.21:0,66,1415	0/0:13,0:13:39.12:0,39,846	0/0:21,0:21:60.18:0,60,1283	0/0:33,0:33:99:0,99,2215	0/0:10,0:10:30.09:0,30,642	0/0:19,0:19:57.19:0,57,817	0/0:21,0:21:60.20:0,60,865	0/0:17,0:17:48.16:0,48,681	0/0:26,0:26:78.25:0,78,1733	0/0:16,0:16:48.16:0,48,1002	0/0:19,0:19:57.20:0,57,1293	0/0:16,0:16:48.16:0,48,1085
chr10	79669105	.	AC	A	576.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.207;DP=650;FS=0.957;HRun=1;HaplotypeScore=58.2514;InbreedingCoeff=0.9992;MQ=86.80;MQ0=0;MQRankSum=-3.007;QD=32.00;ReadPosRankSum=1.517;VQSLOD=3.3484;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:48.16:671,48,0	0/0:12,0:12:36.12:0,36,576	0/0:25,0:25:75.23:0,75,1142	0/0:20,0:20:60.20:0,60,952	0/0:24,0:24:72.25:0,72,1147	0/0:19,0:19:54.18:0,54,860	0/0:21,0:21:63.21:0,63,997	0/0:29,0:29:87.27:0,87,1327	0/0:28,0:28:84.26:0,84,1296	0/0:31,0:31:93.29:0,93,1443	0/0:31,0:31:93.32:0,93,1487	0/0:20,0:20:60.20:0,60,959	0/0:27,0:27:75.26:0,75,1197	0/0:24,0:24:72.23:0,72,1128	0/0:29,0:29:87.26:0,87,1343	0/0:23,0:23:69.24:0,69,1103	0/0:10,0:10:30.10:0,30,480	0/0:18,0:18:54.18:0,54,862	0/0:17,0:17:51.17:0,51,795	0/0:25,0:25:75.24:0,75,1174	0/0:31,0:31:93.27:0,93,1459	0/0:24,0:24:72.22:0,72,1103	0/0:30,0:30:90.31:0,90,1439	0/0:13,0:13:39.13:0,39,623	0/0:23,0:23:69.24:0,69,1103	0/0:27,0:27:81.26:0,81,1271	0/0:38,0:38:99:0,114,1799	0/0:13,0:13:39.13:0,39,613
chr10	79669201	.	AATCT	A	2094.60	PASS	AB=0.915;AC=27;AF=0.587;AN=46;BaseQRankSum=7.113;DP=604;FS=11.333;HRun=0;HaplotypeScore=114.6805;InbreedingCoeff=0.4244;MQ=61.16;MQ0=18;MQRankSum=-2.803;QD=5.90;ReadPosRankSum=-0.968;VQSLOD=0.9639;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:12.04:0,12,209	0/1:6,1:7:24.03:24,0,380	./.	./.	0/1:23,2:25:15.04:15,0,591	0/0:30,0:30:12.04:0,12,236	./.	./.	0/0:19,0:22:9.03:0,9,156	1/1:22,5:27:15.01:182,15,0	0/0:22,0:22:21.07:0,21,484	1/1:11,11:22:18.06:271,18,0	0/0:17,0:17:21.05:0,21,418	1/1:24,6:30:15.05:225,15,0	1/1:12,7:21:24.07:327,24,0	1/1:13,5:18:18.05:253,18,0	0/0:15,0:15:3.01:0,3,63	0/0:5,0:6:3:0,3,25	1/1:20,0:19:3:28,3,0	1/1:20,0:34:21.02:195,21,0	./.	1/1:15,0:22:18.03:185,18,0	1/1:13,7:20:11.65:180,12,0	0/1:10,2:12:66.11:66,0,391	1/1:17,0:23:14.96:126,15,0	0/1:30,1:31:11.97:12,0,643	1/1:15,0:23:15.02:140,15,0	0/1:18,1:19:36.07:36,0,120
chr10	79671366	.	G	GA	2541.37	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-6.191;DP=659;FS=3.036;HRun=10;HaplotypeScore=79.0436;InbreedingCoeff=0.9635;MQ=69.24;MQ0=1;MQRankSum=0.302;QD=19.55;ReadPosRankSum=0.094;VQSLOD=4.4390;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:61.11:0,61,490	0/0:12,0:12:10.97:0,11,246	0/0:20,0:17:14.29:0,14,268	0/0:19,0:18:30.51:0,31,255	0/0:29,0:29:65.72:0,66,531	0/0:36,0:36:80.85:0,81,662	0/0:21,1:22:18.90:0,19,354	0/0:29,0:29:30.33:0,30,414	0/0:26,0:26:65.90:0,66,542	0/0:28,0:28:56.84:0,57,468	0/0:19,0:20:43.98:0,44,351	1/1:0,16:16:33.08:352,33,0	1/1:4,18:23:44.95:462,45,0	1/1:2,11:13:30.04:308,30,0	0/0:23,0:23:53.89:0,54,436	0/0:17,0:17:43.19:0,43,366	0/0:32,0:33:78.56:0,79,627	0/0:19,0:19:44.94:0,45,369	0/0:21,0:21:41.91:0,42,341	0/0:38,0:39:60.80:0,61,640	0/0:19,1:21:17.96:0,18,340	1/1:5,19:24:7.76:462,8,0	1/1:6,30:36:41.48:647,41,0	1/1:1,17:18:47.95:494,48,0	0/0:17,0:18:40.95:0,41,326	0/0:33,0:33:80.84:0,81,665	0/0:27,3:30:42.92:0,43,559	0/0:5,0:5:11.97:0,12,99
chr10	79671705	.	T	TAA	9843.33	PASS	AB=0.813;AC=32;AF=0.571;AN=56;BaseQRankSum=-10.445;DP=509;FS=2.862;HRun=10;HaplotypeScore=69.4841;InbreedingCoeff=0.8828;MQ=65.24;MQ0=0;MQRankSum=-0.322;QD=27.96;ReadPosRankSum=-3.780;VQSLOD=4.2427;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:26:52.40:184,52,0	0/1:2,3:5:0.51:98,0,1	0/1:4,0:4:0:0,0,0	0/0:1,0:2:2.74:0,3,12	1/1:6,29:39:92.53:1169,93,0	0/0:14,0:14:36.07:0,36,366	0/0:9,0:9:24.04:0,24,238	1/1:2,20:23:63.19:904,63,0	1/1:4,1:19:2.95:111,3,0	1/1:5,14:19:46.40:666,46,0	1/1:5,23:29:69.19:997,69,0	0/0:22,0:23:50.84:0,51,500	0/0:14,0:14:42.08:0,42,420	0/0:15,0:15:36.01:0,36,359	1/1:4,19:24:57.19:832,57,0	1/1:1,14:16:23.99:474,24,0	0/0:24,0:24:62.47:0,62,619	1/1:3,18:21:39.13:581,39,0	1/1:2,10:16:37.32:491,37,0	1/1:6,28:37:88.61:1131,89,0	1/1:5,6:12:12.51:164,13,0	0/0:12,0:13:35.82:0,36,347	0/0:17,0:17:45.06:0,45,451	0/0:11,0:11:30.06:0,30,305	0/0:15,0:15:31.42:0,31,137	1/1:5,17:24:56.47:780,56,0	1/1:2,18:20:45.15:670,45,0	1/1:2,13:18:44.55:591,45,0
chr10	79672152	.	A	ATT	10142.20	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-1.790;DP=559;FS=0.000;HRun=9;HaplotypeScore=75.2469;InbreedingCoeff=0.9735;MQ=74.80;MQ0=0;MQRankSum=-3.569;QD=22.69;ReadPosRankSum=1.350;VQSLOD=3.9881;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:45:99:380,100,0	1/1:1,9:11:29.59:424,30,0	0/0:12,0:12:9.19:0,9,181	0/0:14,0:14:20.76:0,21,179	1/1:3,13:18:44.12:618,44,0	0/0:29,0:29:78.18:0,78,830	0/0:24,0:24:66.52:0,67,730	1/1:7,28:35:84.76:1290,85,0	1/1:0,1:12:23.48:132,23,0	1/1:6,13:20:42.12:620,42,0	1/1:2,8:12:29.58:407,30,0	1/1:4,0:17:16.07:115,16,0	1/1:4,0:14:13.25:50,13,0	1/1:2,0:26:45.66:171,46,0	1/1:0,14:14:36.12:542,36,0	1/1:0,13:14:36.12:554,36,0	0/0:32,0:32:81.16:0,81,854	1/1:0,17:18:39.13:600,39,0	1/1:11,11:24:38.06:479,38,0	1/1:0,19:19:51.13:751,51,0	1/1:2,14:16:33.11:508,33,0	1/1:3,0:21:32.44:111,32,0	1/1:4,0:12:17.47:60,17,0	1/1:1,0:22:47.41:163,47,0	1/1:2,0:14:22.46:77,22,0	1/1:3,13:16:39.12:576,39,0	1/1:7,20:29:62.69:906,63,0	1/1:2,13:18:41.63:609,42,0
chr10	79672506	.	AATTTATTTATTT	A	1558.77	PASS	AB=0.733;AC=23;AF=0.575;AN=40;BaseQRankSum=1.249;DP=253;FS=0.000;HRun=0;HaplotypeScore=89.3651;InbreedingCoeff=0.5010;MQ=74.86;MQ0=0;MQRankSum=-3.114;QD=11.06;ReadPosRankSum=-0.933;VQSLOD=1.3671;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:9:6.02:0,6,153	1/1:6,3:9:6.02:205,6,0	./.	./.	1/1:9,4:13:8.99:213,9,0	0/0:9,0:9:21.07:0,21,1184	./.	1/1:26,0:26:18.03:215,18,0	./.	1/1:11,1:12:3.01:103,3,0	1/1:5,0:5:3.01:67,3,0	0/0:8,0:10:9.03:0,9,365	0/0:5,0:7:6:0,6,181	0/0:5,0:5:3.01:0,3,51	1/1:8,1:9:3.01:90,3,0	1/1:5,1:7:6.02:186,6,0	0/0:14,0:15:33.11:0,33,1787	0/1:7,4:11:13.60:189,0,14	1/1:13,1:14:2.45:102,2,0	./.	./.	./.	./.	0/0:2,0:3:3.01:0,3,157	0/0:6,0:9:12.02:0,12,389	1/1:8,2:10:6.01:127,6,0	1/1:9,1:10:3.01:103,3,0	1/1:14,1:15:3.01:103,3,0
chr10	79672788	.	ATTTGTTTG	A	9088.37	PASS	AB=0.571;AC=27;AF=0.482;AN=56;BaseQRankSum=11.731;DP=358;FS=5.216;HRun=0;HaplotypeScore=110.7392;InbreedingCoeff=0.8519;MQ=63.95;MQ0=0;MQRankSum=-11.743;QD=51.93;ReadPosRankSum=-0.405;VQSLOD=4.3439;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:48.14:0,48,1525	1/1:1,1:2:6.01:107,6,0	0/0:14,0:12:30.10:0,30,921	0/0:13,0:11:7.38:0,7,253	1/1:11,11:22:47.74:755,48,0	0/0:19,0:19:57.13:0,57,1897	0/0:14,0:14:42.14:0,42,1600	1/1:12,8:20:47.62:754,48,0	0/0:13,0:13:33.10:0,33,1285	1/1:1,17:18:51.11:1327,51,0	1/1:4,8:12:36:746,36,0	0/0:18,0:18:48.02:0,48,1752	0/0:12,0:12:32.83:0,33,1091	0/0:10,0:10:24.08:0,24,925	1/1:1,15:16:42.13:1059,42,0	1/1:3,8:11:27.08:671,27,0	0/0:24,0:24:69.22:0,69,2717	1/1:6,2:8:17.28:232,17,0	1/1:6,16:22:54.01:1100,54,0	0/1:3,9:12:31.47:743,0,31	1/1:1,3:4:2.97:20,3,0	0/0:3,0:3:9.03:0,9,386	0/0:8,0:8:21.04:0,21,715	0/0:6,0:6:17.73:0,18,644	0/0:10,0:10:18.05:0,18,669	1/1:6,6:12:32.92:598,33,0	1/1:4,10:14:39:930,39,0	1/1:2,0:2:5.99:48,6,0
chr10	79672838	.	GTT	G	3531.95	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=4.478;DP=417;FS=4.824;HRun=15;HaplotypeScore=98.8613;InbreedingCoeff=0.9359;MQ=76.40;MQ0=4;MQRankSum=-4.113;QD=17.40;ReadPosRankSum=2.463;VQSLOD=3.0843;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:14:21.03:0,21,208	1/1:0,7:7:21:185,21,0	0/0:36,0:22:38.44:0,38,404	0/0:21,0:13:15.37:0,15,109	1/1:3,15:18:29.69:316,30,0	0/0:9,1:14:11.12:0,11,337	0/0:16,0:18:45.04:0,45,528	1/1:4,15:19:44.66:376,45,0	0/0:6,0:18:36.04:0,36,357	1/1:10,11:25:34.97:372,35,0	1/1:6,11:17:29.83:264,30,0	0/0:3,0:10:17.82:0,18,179	0/0:1,0:10:15.02:0,15,142	0/0:2,0:11:16.80:0,17,144	1/1:3,9:12:26.94:238,27,0	1/1:6,8:15:26.58:223,27,0	0/0:28,0:31:77.66:0,78,954	1/1:0,6:6:18:159,18,0	1/1:10,11:24:35.40:346,35,0	1/1:7,8:17:20.65:228,21,0	1/1:0,1:1:3:26,3,0	0/0:1,0:5:12:0,12,113	0/0:6,0:7:12.49:0,12,127	0/0:2,0:5:9.02:0,9,98	0/0:0,0:13:21.02:0,21,199	1/1:3,13:16:38.91:343,39,0	1/1:6,14:23:47.03:392,47,0	1/1:0,2:3:8.74:65,9,0
chr10	79673577	.	T	TC	12968.18	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-17.516;DP=603;FS=0.000;HRun=0;HaplotypeScore=76.5855;InbreedingCoeff=0.9914;MQ=72.21;MQ0=0;MQRankSum=0.361;QD=36.43;ReadPosRankSum=0.714;VQSLOD=4.4634;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.20:0,78,1044	1/1:0,3:3:9.03:125,9,0	0/0:14,0:14:33.09:0,33,439	0/0:10,0:10:24.05:0,24,290	1/1:0,36:36:99:1320,102,0	0/0:24,0:24:69.22:0,69,948	0/0:9,0:9:27.09:0,27,377	1/1:2,36:38:99:1422,108,0	1/1:0,14:14:39.13:539,39,0	1/1:1,29:30:87.27:1190,87,0	1/1:0,24:24:66.21:921,66,0	0/0:20,0:20:57.12:0,57,728	0/0:19,0:19:55.66:0,56,683	0/0:17,0:17:42.09:0,42,536	1/1:1,32:33:75.24:1044,75,0	1/1:0,24:24:60.20:837,60,0	0/0:30,0:30:81.04:0,81,1099	1/1:1,12:13:27.08:376,27,0	1/1:0,13:13:39.03:501,39,0	1/1:1,33:34:93.15:1243,93,0	1/1:0,23:23:57.19:795,57,0	0/0:14,0:14:42.11:0,42,538	0/0:30,0:30:84.20:0,84,1083	0/0:21,0:21:57.13:0,57,738	0/0:13,0:13:39.12:0,39,528	1/1:0,29:29:87.17:1109,87,0	1/1:1,27:28:75.24:1046,75,0	1/1:0,14:14:36.12:501,36,0
chr10	79673669	.	GT	G	3913.20	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.590;DP=562;FS=8.657;HRun=1;HaplotypeScore=109.7610;InbreedingCoeff=0.9945;MQ=72.12;MQ0=0;MQRankSum=-15.571;QD=28.77;ReadPosRankSum=0.428;VQSLOD=2.6195;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:45.02:510,45,0	0/0:4,0:4:12.04:0,12,192	0/0:19,0:18:54.13:0,54,771	0/0:17,0:17:44.98:0,45,679	0/0:15,0:15:45.15:0,45,716	0/0:21,0:21:63.21:0,63,1005	0/0:21,0:21:63.21:0,63,1005	0/0:31,0:31:93.32:0,93,1484	0/0:14,0:14:39.13:0,39,613	0/0:25,0:25:75.24:0,75,1175	0/0:19,0:19:57.19:0,57,909	1/1:0,16:16:42.11:502,42,0	1/1:0,20:20:60.16:725,60,0	1/1:0,16:16:38.93:462,39,0	0/0:29,0:29:81.28:0,81,1291	0/0:13,0:13:39.13:0,39,624	0/0:29,0:29:87.30:0,87,1389	0/0:15,0:15:39.13:0,39,623	0/0:20,0:20:60.20:0,60,956	0/0:31,0:31:87.28:0,87,1367	0/0:35,0:35:99:0,105,1651	1/1:2,10:12:36.11:449,36,0	1/1:1,15:16:41.98:457,42,0	1/1:1,15:16:24.48:263,24,0	1/1:0,18:18:48.06:544,48,0	0/0:31,0:31:90.29:0,90,1396	0/0:22,0:22:60.20:0,60,946	0/0:15,0:15:42.14:0,42,671
chr10	79673673	.	GTGAGTTCAC	G	9199.98	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.616;DP=560;FS=7.105;HRun=0;HaplotypeScore=179.2272;InbreedingCoeff=0.9969;MQ=68.22;MQ0=0;MQRankSum=-15.442;QD=69.17;ReadPosRankSum=1.377;VQSLOD=4.4520;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:22:42.10:1114,42,0	0/0:5,0:5:15.04:0,15,558	0/0:15,0:15:45.15:0,45,1600	0/0:15,0:15:36.11:0,36,1238	0/0:15,0:15:45.15:0,45,2124	0/0:22,0:22:63.22:0,63,3032	0/0:22,0:22:63.22:0,63,2982	0/0:34,0:34:99:0,99,4356	0/0:14,0:14:39.13:0,39,1758	0/0:26,0:26:78.27:0,78,3713	0/0:20,0:20:60.20:0,60,2699	1/1:2,13:15:42.14:1172,42,0	1/1:1,19:20:57.19:1682,57,0	1/1:3,12:15:39.13:1127,39,0	0/0:28,0:28:81.28:0,81,3796	0/0:14,0:14:42.14:0,42,2001	0/0:31,0:31:93.30:0,93,4220	0/0:15,0:15:39.13:0,39,1934	0/0:21,0:21:63.20:0,63,2586	0/0:29,0:29:87.28:0,87,4009	0/0:35,0:35:99:0,105,4794	1/1:1,10:12:33.11:963,33,0	1/1:1,15:16:42.14:1202,42,0	1/1:2,13:15:24.08:646,24,0	1/1:3,15:18:45.15:1295,45,0	0/0:32,0:32:96.31:0,96,4179	0/0:19,0:19:51.18:0,51,2432	0/0:15,0:15:42.14:0,42,1687
chr10	79673677	.	GTTCAC	G	6410.79	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.662;DP=536;FS=6.275;HRun=0;HaplotypeScore=142.8569;InbreedingCoeff=0.9943;MQ=65.96;MQ0=0;MQRankSum=-14.946;QD=50.88;ReadPosRankSum=0.772;VQSLOD=5.0983;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:39.60:761,40,0	0/0:4,0:4:12.04:0,12,383	0/0:14,0:14:35.79:0,36,923	0/0:12,0:12:30.10:0,30,773	0/0:17,0:17:51.17:0,51,1568	0/0:21,0:21:63.22:0,63,1992	0/0:22,0:22:66.23:0,66,2083	0/0:33,0:33:99:0,99,2985	0/0:13,0:13:39.13:0,39,1157	0/0:26,0:26:78.27:0,78,2514	0/0:20,0:20:60.21:0,60,1837	1/1:14,0:14:42.14:833,42,0	1/1:20,0:20:60.21:1204,60,0	1/1:13,0:13:39.13:764,39,0	0/0:27,0:27:81.28:0,81,2553	0/0:15,0:15:45.15:0,45,1420	0/0:30,0:30:87.30:0,87,2781	0/0:14,0:14:42.14:0,42,1299	0/0:19,0:19:54.19:0,54,1665	0/0:28,0:28:81.28:0,81,2585	0/0:33,0:33:99:0,99,3143	1/1:11,2:13:33.11:656,33,0	1/1:15,3:18:42.14:813,42,0	1/1:14,0:14:24.04:450,24,0	1/1:16,0:16:48.16:930,48,0	0/0:30,0:30:90.31:0,90,2880	0/0:17,0:17:51.18:0,51,1579	0/0:15,0:15:33.10:0,33,985
chr10	79674379	.	G	GA	4526.72	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.734;DP=634;FS=0.770;HRun=6;HaplotypeScore=59.3569;InbreedingCoeff=0.9874;MQ=79.90;MQ0=0;MQRankSum=-0.831;QD=33.78;ReadPosRankSum=0.330;VQSLOD=4.5512;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:48.02:0,48,468	0/0:5,0:5:12.03:0,12,122	0/0:17,0:17:42.05:0,42,410	0/0:14,0:14:12.02:0,12,122	0/0:29,0:29:81.17:0,81,820	0/0:30,0:30:84.19:0,84,857	0/0:22,0:22:60.11:0,60,600	0/0:35,0:35:87.17:0,87,878	0/0:16,0:16:45.10:0,45,459	0/0:29,0:29:87.20:0,87,888	0/0:31,0:31:84.19:0,84,856	1/1:3,10:13:30.10:377,30,0	1/1:0,27:27:78.25:981,78,0	1/1:1,16:17:48.15:604,48,0	0/0:38,0:38:99:0,111,1126	0/0:24,0:24:63.11:0,63,630	0/0:12,0:12:36.08:0,36,367	0/0:16,0:16:45.06:0,45,448	0/0:16,0:16:42.09:0,42,423	0/0:38,0:38:99:0,111,1117	0/0:23,0:22:66.13:0,66,666	1/1:3,25:28:75.24:944,75,0	1/1:4,23:27:72.23:904,72,0	1/1:3,19:22:57.18:717,57,0	0/0:24,0:24:66.13:0,66,667	0/0:16,0:16:42.10:0,42,428	0/0:30,0:30:87.18:0,87,881	0/0:16,0:16:45.10:0,45,459
chr10	79674516	.	GA	G	10309.33	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=7.685;DP=646;FS=6.888;HRun=10;HaplotypeScore=68.7811;InbreedingCoeff=0.9789;MQ=83.04;MQ0=0;MQRankSum=-4.176;QD=20.66;ReadPosRankSum=2.609;VQSLOD=5.9330;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,2:25:10.54:0,11,511	1/1:2,8:10:20.98:182,21,0	0/0:24,1:25:11.19:0,11,364	0/0:16,1:16:33.05:0,33,348	1/1:6,21:27:53.95:469,54,0	0/0:31,1:32:64.19:0,64,936	0/0:24,0:24:60.16:0,60,664	1/1:5,30:35:85.19:747,85,0	1/1:2,18:20:50.99:443,51,0	1/1:3,19:22:59.99:521,60,0	1/1:3,17:20:47.97:417,48,0	1/1:0,16:16:44.99:391,45,0	1/1:4,20:25:49.78:422,50,0	1/1:3,19:22:56.98:495,57,0	1/1:2,36:38:92.98:807,93,0	1/1:3,18:21:47.99:417,48,0	0/0:23,1:24:40.11:0,40,662	1/1:1,10:11:26.99:234,27,0	1/1:4,14:18:14.78:351,15,0	1/1:6,28:35:70.97:605,71,0	1/1:5,22:27:53.97:469,54,0	1/1:1,20:22:62.02:527,62,0	1/1:3,16:19:47.99:417,48,0	1/1:2,21:23:59.97:521,60,0	1/1:3,12:15:26.99:234,27,0	1/1:3,18:21:53.98:469,54,0	1/1:0,39:39:99:911,105,0	1/1:0,13:13:29.99:260,30,0
chr10	79675213	.	GCGCT	G	442.35	PASS	AB=0.906;AC=24;AF=0.480;AN=50;BaseQRankSum=4.574;DP=181;FS=6.580;HRun=0;HaplotypeScore=52.1689;InbreedingCoeff=0.4115;MQ=62.52;MQ0=22;MQRankSum=-1.439;QD=6.81;ReadPosRankSum=4.083;VQSLOD=0.6868;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:5:3.01:45,3,0	./.	0/0:16,0:10:19.25:0,19,170	0/0:22,0:11:23.74:0,24,206	0/0:5,0:3:0.03:0,0,7	0/0:9,0:9:17.86:0,18,152	0/0:16,0:15:7.71:0,8,339	0/0:13,0:11:25.41:0,25,152	1/1:5,0:5:2.83:16,3,0	0/1:7,0:7:26.64:27,0,51	0/0:4,0:4:2.97:0,3,20	1/1:2,0:2:5.92:41,6,0	1/1:3,0:4:3.01:58,3,0	1/1:3,1:4:5.93:75,6,0	0/1:5,0:4:0.65:1,0,10	0/1:3,0:3:8.55:17,0,9	0/0:12,0:11:26.71:0,27,243	1/1:3,0:3:6.01:67,6,0	0/0:2,0:2:5.35:0,5,29	0/0:4,0:4:5.04:0,5,34	1/1:7,0:7:5.22:32,5,0	1/1:5,0:3:6.02:117,6,0	./.	0/1:2,3:4:8.96:9,0,17	0/0:5,0:5:5.95:0,6,42	1/1:5,0:5:7.99:58,8,0	1/1:3,0:2:4.83:38,5,0	./.
chr10	79675480	.	TC	T	12644.78	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=13.338;DP=460;FS=4.226;HRun=1;HaplotypeScore=99.2435;InbreedingCoeff=0.9572;MQ=96.38;MQ0=0;MQRankSum=-8.309;QD=37.97;ReadPosRankSum=5.173;VQSLOD=5.0101;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:54.01:722,54,0	1/1:0,3:3:9.03:126,9,0	0/0:30,0:30:90.26:0,90,1315	0/0:27,0:27:72.06:0,72,972	1/1:0,6:6:18.06:251,18,0	0/0:21,0:21:60.16:0,60,868	0/0:23,0:23:69.20:0,69,1010	1/1:0,28:28:81.23:1070,81,0	1/1:0,10:10:21.07:294,21,0	1/1:0,26:26:78.25:1071,78,0	1/1:0,7:7:20.97:241,21,0	1/1:0,12:12:36.12:503,36,0	1/1:0,17:17:48.16:652,48,0	1/1:0,16:16:45.15:629,45,0	1/1:0,15:15:45.15:629,45,0	1/1:0,14:14:39.13:545,39,0	0/0:26,0:26:78.25:0,78,1162	1/1:0,23:23:66.18:899,66,0	1/1:0,13:13:33.06:422,33,0	1/1:0,11:11:33.03:418,33,0	1/1:0,24:24:63.21:880,63,0	1/1:0,11:11:30.06:397,30,0	1/1:0,6:6:18.02:229,18,0	1/1:0,27:27:65.90:921,66,0	1/1:0,10:10:30.10:419,30,0	1/1:0,21:21:60.17:803,60,0	1/1:1,10:11:33.08:441,33,0	1/1:0,2:2:6.02:84,6,0
chr10	79675538	.	TGA	T	4779.49	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=7.882;DP=423;FS=5.874;HRun=0;HaplotypeScore=129.3617;InbreedingCoeff=0.4300;MQ=47.03;MQ0=25;MQRankSum=-0.694;QD=12.81;ReadPosRankSum=-1.267;VQSLOD=4.2849;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,2:26:12.97:196,13,0	1/1:5,1:5:14.87:111,15,0	1/1:10,0:1:2.96:19,3,0	0/1:23,0:11:28.45:47,0,28	1/1:5,2:6:11.82:80,12,0	0/1:18,0:18:22.10:22,0,425	0/0:24,0:20:3.52:0,4,340	1/1:8,0:8:19.76:106,20,0	1/1:14,1:12:26.83:205,27,0	1/1:15,1:15:38.68:301,39,0	1/1:6,3:9:14.95:122,15,0	1/1:13,5:15:42.70:346,43,0	1/1:9,1:9:21.77:167,22,0	1/1:17,1:18:30.23:240,30,0	1/1:13,2:14:29.60:232,30,0	1/1:11,1:12:26.73:191,27,0	0/0:26,0:25:50.86:0,51,677	1/1:17,1:18:39.83:361,40,0	1/1:12,0:10:29.86:231,30,0	1/1:9,1:10:23.84:186,24,0	1/1:20,0:17:24.67:193,25,0	1/1:13,1:14:26.81:205,27,0	1/1:10,2:12:11.69:98,12,0	1/1:29,1:29:33.77:264,34,0	1/1:6,0:6:6.37:38,6,0	1/1:17,0:16:47.61:365,48,0	1/1:17,3:20:53.80:433,54,0	1/1:1,0:1:2.99:23,3,0
chr10	79675552	.	TGTGTGTGTGTGA	T	2726.55	PASS	AB=1.000;AC=34;AF=0.630;AN=54;BaseQRankSum=3.036;DP=423;FS=8.613;HRun=0;HaplotypeScore=191.9407;InbreedingCoeff=0.1081;MQ=44.70;MQ0=26;MQRankSum=-3.529;QD=8.66;ReadPosRankSum=-6.538;VQSLOD=-0.5098;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:30:69.94:157,0,70	0/0:5,0:4:2.98:0,3,22	./.	0/0:22,0:2:4.56:0,5,39	1/1:10,0:9:11.24:73,11,0	0/0:22,0:22:44.55:0,45,1178	0/0:25,0:21:28.13:0,28,645	1/1:13,0:13:17.93:86,18,0	0/1:18,0:15:41.98:59,0,42	1/1:11,0:10:8.30:121,8,0	1/1:8,0:8:14.84:113,15,0	1/1:20,0:17:33.08:584,33,0	1/1:9,1:9:8.57:116,9,0	1/1:15,1:16:20.19:218,20,0	0/1:13,0:12:47.34:47,0,70	1/1:13,0:13:13.75:118,14,0	0/0:22,0:21:23.65:0,24,1609	0/1:18,0:18:99:117,0,231	0/1:7,0:6:31.25:31,0,69	0/1:10,0:10:53.59:54,0,68	0/1:20,0:17:21.08:87,0,21	1/1:16,0:16:26.35:221,26,0	1/1:11,1:12:13.84:250,14,0	1/1:26,1:26:29.42:196,29,0	0/1:7,0:7:43.69:44,0,109	0/1:16,0:15:40.16:74,0,40	0/1:17,0:17:99:135,0,117	1/1:1,0:1:0.89:2,1,0
chr10	79676140	.	GTTT	G	8497.86	PASS	AB=0.653;AC=30;AF=0.536;AN=56;BaseQRankSum=-4.881;DP=522;FS=39.448;HRun=12;HaplotypeScore=106.3002;InbreedingCoeff=0.8144;MQ=75.50;MQ0=2;MQRankSum=-4.010;QD=27.59;ReadPosRankSum=2.886;VQSLOD=1.1570;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:18:12.31:0,12,28	1/1:0,9:9:24.08:303,24,0	0/0:30,0:26:56.74:0,57,821	0/0:10,0:9:14.06:0,14,170	1/1:3,26:29:69.13:854,69,0	0/0:30,0:35:90.24:0,90,1535	0/0:12,0:14:40.38:0,40,750	0/1:13,5:19:74.78:123,0,75	1/1:3,24:27:72.22:910,72,0	1/1:5,17:22:51.12:617,51,0	1/1:3,13:16:33.03:416,33,0	0/0:0,0:16:18.33:0,18,39	0/0:0,0:9:9.97:0,10,21	0/0:2,0:15:14.20:0,14,47	1/1:3,25:28:75.22:946,75,0	1/1:3,17:20:45.13:569,45,0	0/0:17,0:19:51.15:0,51,968	1/1:0,11:11:33.11:417,33,0	1/1:1,17:18:48.12:606,48,0	1/1:4,22:26:63.16:791,63,0	1/1:2,4:6:12.02:152,12,0	0/1:1,1:18:13.60:14,0,35	0/0:2,0:20:22.43:0,22,48	0/0:0,0:6:6.23:0,6,13	0/0:4,0:19:16.70:0,17,55	1/1:5,20:25:57.13:720,57,0	1/1:4,25:29:75.21:947,75,0	1/1:1,4:5:9.03:114,9,0
chr10	79676338	.	TG	T	14620.55	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=8.131;DP=590;FS=1.336;HRun=5;HaplotypeScore=74.5787;InbreedingCoeff=0.9971;MQ=82.94;MQ0=0;MQRankSum=-4.833;QD=30.08;ReadPosRankSum=3.303;VQSLOD=5.5087;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:78.20:872,78,0	1/1:0,10:10:27.08:306,27,0	0/0:15,0:15:42.12:0,42,531	0/0:18,0:18:48.12:0,48,565	1/1:2,33:35:93.23:1041,93,0	0/0:28,0:28:84.28:0,84,1148	0/0:17,0:17:45.12:0,45,582	1/1:4,29:33:84.18:914,84,0	1/1:2,10:12:24.07:272,24,0	1/1:0,21:21:63.18:714,63,0	1/1:0,24:24:69.20:783,69,0	1/1:0,21:21:63.18:713,63,0	1/1:1,25:26:69.20:783,69,0	1/1:0,25:25:66.19:748,66,0	1/1:0,26:26:72.21:816,72,0	1/1:1,9:10:21.06:238,21,0	0/0:26,0:26:75.25:0,75,1026	1/1:1,23:24:63.18:714,63,0	1/1:2,17:19:51.14:577,51,0	1/1:0,15:15:45.08:495,45,0	1/1:0,12:12:33.09:374,33,0	1/1:2,23:25:66.15:734,66,0	1/1:1,30:31:78.22:885,78,0	1/1:1,18:19:48.14:544,48,0	1/1:0,8:8:21.06:238,21,0	1/1:1,15:16:45.13:510,45,0	1/1:2,34:36:93.26:1055,93,0	1/1:0,9:9:27.04:293,27,0
chr10	79677276	.	CCTCTATCTCTATCTCTATCTCTATCTCTATCTCTATCTCTATCTCTA	C	1214.49	PASS	AB=0.996;AC=14;AF=0.250;AN=56;BaseQRankSum=-0.892;DP=666;FS=6.555;HRun=0;HaplotypeScore=460.6091;InbreedingCoeff=-0.1691;MQ=51.51;MQ0=67;MQRankSum=-6.325;QD=4.42;ReadPosRankSum=-6.486;VQSLOD=-0.2334;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:22:18.55:0,19,1531	0/1:5,0:4:57.99:58,0,444	0/1:84,0:15:1.16:1,0,571	0/0:103,0:20:36.46:0,36,909	0/0:17,11:27:9.02:0,9,451	0/0:19,0:20:58.73:0,59,5472	0/0:11,0:10:27.54:0,28,1869	0/1:33,0:30:99:118,0,2168	0/1:14,0:17:99:158,0,539	0/1:18,0:17:59.67:60,0,2747	0/0:15,15:31:12.33:0,12,736	0/0:22,0:21:29.14:0,29,3073	0/1:20,0:18:2.62:3,0,1652	0/0:19,0:19:19.43:0,19,1384	0/1:14,0:17:77.68:78,0,107	0/1:12,0:13:99:101,0,193	0/0:25,0:25:69.24:0,69,8330	0/1:8,0:8:99:158,0,383	0/1:11,0:11:99:120,0,905	0/0:14,0:14:3.65:0,4,859	0/0:9,0:9:7.43:0,7,482	0/0:13,0:14:24.07:0,24,1381	0/0:19,0:19:24.08:0,24,2159	0/0:27,0:26:39.41:0,39,3454	0/0:21,0:20:15.79:0,16,1697	0/1:18,0:13:99:185,0,1561	0/1:19,0:22:99:189,0,1979	1/1:3,0:2:6.02:135,6,0
chr10	79677291	.	CTA	C	330.34	PASS	AB=0.910;AC=15;AF=0.268;AN=56;BaseQRankSum=7.424;DP=649;FS=20.950;HRun=0;HaplotypeScore=163.4504;InbreedingCoeff=-0.2263;MQ=56.61;MQ0=43;MQRankSum=-2.777;QD=0.91;ReadPosRankSum=-3.585;VQSLOD=0.2624;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:24.17:0,24,368	0/1:4,1:4:15.50:16,0,97	0/1:68,1:18:21.15:21,0,186	0/1:86,1:23:50.96:51,0,288	0/1:26,0:25:9.95:10,0,76	0/0:27,0:27:39.07:0,39,1060	0/0:19,0:18:48.13:0,48,811	0/0:32,0:28:74.90:0,75,1088	0/1:12,1:13:61.30:65,0,61	0/1:16,1:15:8.35:8,0,476	0/0:28,0:28:8.84:0,9,165	0/0:25,0:24:48.93:0,49,803	0/0:18,0:15:9.76:0,10,346	0/1:18,0:17:13.72:14,0,240	1/1:13,4:16:4.23:40,4,0	0/1:6,5:11:40.14:140,0,40	0/0:25,0:25:61.66:0,62,1242	0/1:7,1:8:6.14:6,0,114	0/1:8,1:9:16.98:17,0,220	0/0:15,1:16:9.29:0,9,138	0/0:10,0:9:5.57:0,6,77	0/0:16,0:15:21.90:0,22,334	0/1:27,0:26:3.49:3,0,485	0/0:26,0:26:10.18:0,10,695	0/0:23,0:22:11.70:0,12,334	0/1:17,0:13:8.56:9,0,274	0/1:16,6:22:80.40:80,0,378	0/0:3,0:2:3.01:0,3,31
chr10	79677293	.	A	ATC	161.86	PASS	AB=0.969;AC=14;AF=0.250;AN=56;BaseQRankSum=7.893;DP=640;FS=16.724;HRun=0;HaplotypeScore=166.3982;InbreedingCoeff=-0.1046;MQ=57.86;MQ0=39;MQRankSum=-3.076;QD=0.67;ReadPosRankSum=-1.460;VQSLOD=1.6852;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:20.40:0,20,269	0/0:5,0:4:1.30:0,1,75	0/1:68,0:19:46.83:47,0,143	0/0:94,0:25:11.98:0,12,207	0/1:25,0:24:9.83:10,0,74	0/0:25,0:25:60.31:0,60,856	0/0:20,0:19:50.91:0,51,632	0/0:34,0:29:64.85:0,65,725	0/1:11,1:15:29.62:47,0,30	0/1:18,0:15:8.46:8,0,314	0/0:26,2:28:8.82:0,9,91	0/0:25,0:24:22.65:0,23,343	0/1:17,0:14:6.58:7,0,155	0/1:18,0:17:21.41:21,0,162	1/1:18,0:17:2.63:11,3,0	0/1:10,0:10:32.28:39,0,32	0/0:25,0:25:66.66:0,67,842	0/1:9,0:9:8.97:9,0,73	0/0:8,0:8:13.31:0,13,141	0/0:14,2:16:8.61:0,9,122	0/0:9,0:8:3.01:0,3,41	0/0:16,0:15:7.08:0,7,225	0/0:27,0:26:12.16:0,12,425	0/0:26,0:26:3.47:0,3,454	0/0:23,0:22:26.76:0,27,296	0/1:16,1:12:28.31:28,0,186	0/1:21,1:22:35.64:36,0,280	1/1:2,1:2:3.01:45,3,0
chr10	79677297	.	CTA	C	355.83	PASS	AB=0.976;AC=15;AF=0.268;AN=56;BaseQRankSum=7.787;DP=618;FS=7.505;HRun=0;HaplotypeScore=165.0993;InbreedingCoeff=-0.1832;MQ=57.92;MQ0=38;MQRankSum=-3.981;QD=1.32;ReadPosRankSum=-2.293;VQSLOD=1.8359;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:21.39:0,21,389	0/1:5,0:4:15.50:16,0,93	0/0:61,0:19:7.87:0,8,205	0/1:87,1:30:8.42:8,0,373	0/1:24,0:23:11.93:12,0,76	0/0:27,0:27:67.33:0,67,1231	0/0:22,0:21:57.17:0,57,1009	0/0:33,0:28:73.89:0,74,1097	0/1:14,0:14:38.53:67,0,39	0/1:16,2:15:42.36:42,0,357	0/0:28,0:28:8.81:0,9,107	0/0:24,0:23:43.59:0,44,774	0/0:17,0:14:20.04:0,20,373	0/1:17,0:16:25.86:26,0,300	1/1:16,1:16:3.36:39,3,0	0/1:10,0:10:35.77:140,0,36	0/0:24,0:24:57.64:0,58,1104	0/1:10,0:9:6.73:7,0,97	0/1:9,0:7:43.94:44,0,126	0/1:18,0:18:12.53:13,0,125	0/0:6,0:5:3.01:0,3,53	0/0:17,0:16:16.17:0,16,458	0/0:26,0:25:29.78:0,30,614	0/0:26,0:26:7.27:0,7,718	0/0:22,0:21:26.05:0,26,392	0/1:15,0:11:4.88:5,0,240	0/1:20,0:20:75.67:76,0,352	0/1:3,1:3:2.67:13,0,3
chr10	79677309	.	CTA	C	1313.96	PASS	AB=0.951;AC=28;AF=0.500;AN=56;BaseQRankSum=6.713;DP=582;FS=16.738;HRun=0;HaplotypeScore=168.9023;InbreedingCoeff=0.4425;MQ=68.14;MQ0=26;MQRankSum=-4.023;QD=4.17;ReadPosRankSum=-1.434;VQSLOD=1.2303;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:27.13:0,27,304	1/1:7,0:6:8.98:71,9,0	0/0:51,0:25:8.13:0,8,418	0/1:67,0:37:15.55:16,0,447	1/1:22,0:21:2.86:24,3,0	0/0:29,0:29:84.25:0,84,1453	0/0:20,0:19:54.19:0,54,1018	0/1:34,0:29:99:151,0,285	1/1:11,0:11:12.34:84,12,0	0/1:14,0:12:9.66:131,0,10	1/1:24,0:24:2.85:25,3,0	0/0:23,0:22:48.83:0,49,711	0/0:17,0:14:6.09:0,6,300	0/0:19,0:18:31.73:0,32,421	1/1:15,0:14:6.36:62,6,0	1/1:13,0:13:21.78:203,22,0	0/0:23,0:22:54.92:0,55,1088	1/1:11,0:10:6.16:53,6,0	0/1:7,0:5:29.97:73,0,30	1/1:22,0:22:14.29:124,14,0	1/1:6,0:4:3:25,3,0	0/0:18,0:17:35.30:0,35,454	0/0:26,0:25:41.98:0,42,597	0/0:23,0:23:39.08:0,39,559	0/1:11,8:18:77.69:107,0,78	0/1:14,0:10:2.69:76,0,3	1/1:19,0:19:22.47:228,22,0	1/1:7,0:6:3.28:53,3,0
chr10	79677317	.	A	ATCTC	2617.10	PASS	AB=0.978;AC=34;AF=0.630;AN=54;BaseQRankSum=7.583;DP=559;FS=1.021;HRun=0;HaplotypeScore=178.1519;InbreedingCoeff=0.4114;MQ=67.88;MQ0=22;MQRankSum=-6.791;QD=7.27;ReadPosRankSum=1.155;VQSLOD=2.8011;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:19.70:0,20,153	1/1:6,0:5:8.99:96,9,0	0/0:51,0:33:41.64:0,42,776	0/0:54,0:29:28.25:0,28,430	0/1:20,0:19:0:0,0,0	0/0:29,0:29:69.22:0,69,1208	0/0:22,0:21:45.51:0,46,806	1/1:30,0:26:30.95:217,31,0	1/1:10,0:10:11.22:157,11,0	1/1:16,0:14:18.30:171,18,0	0/1:24,0:24:0:1,0,0	0/1:21,1:21:50.01:277,0,50	0/1:17,2:17:29.86:252,0,30	0/1:17,0:16:67.22:67,0,137	1/1:15,0:14:6.48:82,6,0	1/1:11,0:11:19.82:290,20,0	0/0:21,0:20:51.32:0,51,956	1/1:13,0:12:10.02:81,10,0	1/1:8,0:6:9.73:86,10,0	1/1:21,0:21:14.99:126,15,0	./.	0/1:19,0:18:99:115,0,117	0/1:24,1:24:64.26:64,0,153	0/1:20,0:20:96.96:97,0,100	1/1:21,0:20:12.03:149,12,0	1/1:16,0:12:8:63,8,0	1/1:18,0:18:27.79:279,28,0	1/1:9,0:8:17.87:133,18,0
chr10	79677452	.	CT	C	233.21	PASS	AB=0.919;AC=5;AF=0.089;AN=56;BaseQRankSum=3.686;DP=524;FS=9.514;HRun=12;HaplotypeScore=61.4540;InbreedingCoeff=0.3536;MQ=71.18;MQ0=0;MQRankSum=0.727;QD=3.33;ReadPosRankSum=0.706;VQSLOD=-0.5724;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:51.04:0,51,494	0/0:7,0:7:15.03:0,15,152	0/0:31,1:20:26.40:0,26,323	0/1:15,0:11:14.38:17,0,14	0/0:31,0:31:68.96:0,69,678	0/0:25,0:25:49.35:0,49,677	0/0:17,0:17:45.08:0,45,451	0/0:16,0:16:23.65:0,24,196	0/0:11,0:11:30.04:0,30,295	0/0:22,0:22:47.31:0,47,460	0/0:20,1:21:18.82:0,19,364	0/0:18,0:18:19.62:0,20,343	0/0:18,0:17:20.44:0,20,330	0/0:16,1:17:24.86:0,25,433	0/0:16,0:15:36.04:0,36,356	0/0:8,0:8:24.04:0,24,239	0/0:13,0:13:32.64:0,33,334	0/0:27,0:27:72.08:0,72,718	0/1:17,3:20:42.63:43,0,235	0/0:20,0:20:33.04:0,33,319	0/0:12,0:12:28.30:0,28,273	0/1:14,2:16:10.41:10,0,263	0/0:25,0:25:66.08:0,66,653	0/0:16,1:17:21.80:0,22,385	1/1:2,15:19:37.89:284,38,0	0/0:24,0:23:57.12:0,57,578	0/0:26,0:26:63.01:0,63,603	0/0:7,0:7:21.04:0,21,213
chr10	79677981	.	GAA	G	4592.27	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.837;DP=582;FS=0.000;HRun=3;HaplotypeScore=68.8466;InbreedingCoeff=0.9991;MQ=83.49;MQ0=1;MQRankSum=0.437;QD=42.52;ReadPosRankSum=3.909;VQSLOD=4.2915;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.28:0,81,1557	0/0:7,0:7:21.07:0,21,406	0/0:18,0:18:51.17:0,51,973	0/0:17,0:17:45.15:0,45,849	0/0:30,0:29:87.25:0,87,1592	0/0:26,0:26:78.27:0,78,1507	0/0:14,0:14:42.14:0,42,811	0/0:36,0:36:99:0,105,1959	0/0:25,0:25:75.25:0,75,1410	0/0:28,0:28:81.27:0,81,1505	0/0:27,0:27:81.27:0,81,1528	1/1:0,18:18:48.16:735,48,0	1/1:0,19:18:51.17:781,51,0	1/1:1,19:20:57.19:873,57,0	0/0:21,0:21:60.21:0,60,1159	0/0:23,0:23:69.24:0,69,1333	0/0:24,0:24:69.23:0,69,1293	0/0:14,0:14:39.13:0,39,734	0/0:20,0:20:60.21:0,60,1136	0/0:27,0:27:81.25:0,81,1472	0/0:14,0:14:39.13:0,39,753	1/1:0,18:18:54.18:827,54,0	1/1:0,21:21:56.59:872,57,0	1/1:0,12:12:33.11:505,33,0	0/0:18,0:17:54.19:0,54,1035	0/0:18,0:18:51.17:0,51,985	0/0:27,0:27:81.26:0,81,1492	0/0:13,0:13:39.13:0,39,753
chr10	79678111	.	TTCTCTCTC	T	305.16	PASS	AB=0.982;AC=14;AF=0.269;AN=52;BaseQRankSum=2.605;DP=534;FS=3.324;HRun=0;HaplotypeScore=133.7613;InbreedingCoeff=0.4771;MQ=59.61;MQ0=14;MQRankSum=-3.286;QD=1.97;ReadPosRankSum=1.635;VQSLOD=2.6699;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:27:17.08:49,0,17	./.	./.	0/1:25,0:8:0:0,0,0	0/0:31,0:32:3.48:0,3,73	0/0:18,0:18:8.37:0,8,97	0/0:8,0:8:2.68:0,3,11	0/0:31,0:30:4.23:0,4,26	0/0:11,0:13:15.05:0,15,331	0/0:28,0:28:21.99:0,22,628	0/0:15,0:14:9.03:0,9,318	1/1:9,3:12:5.88:89,6,0	1/1:17,4:20:3.01:74,3,0	0/0:14,0:16:8.82:0,9,54	0/0:12,0:11:15.03:0,15,436	0/0:20,0:20:14.96:0,15,223	0/0:27,0:27:15:0,15,265	0/0:9,0:12:12.02:0,12,217	0/0:22,0:20:9.02:0,9,177	0/0:23,0:23:6.02:0,6,161	0/0:10,0:10:6.02:0,6,160	1/1:15,8:23:6.02:148,6,0	1/1:12,6:19:2.37:9,2,0	1/1:11,0:11:3.01:55,3,0	1/1:16,1:17:2.97:20,3,0	0/0:20,0:20:9:0,9,105	0/0:23,0:26:15.02:0,15,232	0/0:13,0:10:3.01:0,3,114
chr10	79678313	.	AT	A	8336.26	PASS	AB=0.526;AC=43;AF=0.768;AN=56;BaseQRankSum=6.174;DP=526;FS=6.245;HRun=11;HaplotypeScore=57.2844;InbreedingCoeff=0.8899;MQ=67.03;MQ0=0;MQRankSum=-0.571;QD=19.99;ReadPosRankSum=0.568;VQSLOD=5.9084;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,30:38:59.57:623,60,0	1/1:0,4:4:11.99:99,12,0	0/0:14,0:13:17.52:0,18,137	0/0:9,0:9:14.97:0,15,130	1/1:1,27:28:74.85:610,75,0	0/0:10,1:11:5.27:0,5,245	0/0:15,0:15:39.03:0,39,395	1/1:0,23:23:65.88:533,66,0	0/1:1,8:10:2.98:174,0,3	1/1:3,21:24:62.91:514,63,0	1/1:2,18:20:47.85:382,48,0	1/1:0,18:18:50.82:409,51,0	1/1:4,17:21:41.92:345,42,0	1/1:1,18:19:53.94:443,54,0	1/1:3,16:19:44.94:369,45,0	1/1:4,16:20:41.93:345,42,0	0/0:38,0:39:99:0,111,1142	1/1:4,13:18:32:252,32,0	1/1:5,12:16:44.92:364,45,0	1/1:5,16:21:47.94:394,48,0	1/1:0,7:7:20.98:172,21,0	1/1:0,19:19:44.94:369,45,0	1/1:3,16:19:15.84:337,16,0	1/1:2,18:20:50.93:419,51,0	0/0:19,1:20:26.48:0,26,487	1/1:3,22:25:65.92:542,66,0	1/1:0,21:21:62.93:517,63,0	1/1:1,5:6:14.98:123,15,0
chr10	79678464	.	GTTCAATTAGCA	G	27246.32	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=14.076;DP=547;FS=0.367;HRun=0;HaplotypeScore=198.5205;InbreedingCoeff=0.9635;MQ=78.14;MQ0=0;MQRankSum=-16.106;QD=70.22;ReadPosRankSum=2.711;VQSLOD=4.7639;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,7986	1/1:0,5:5:11.62:420,12,0	0/0:17,0:17:51.17:0,51,2456	0/0:19,0:19:44.69:0,45,1730	1/1:3,18:21:33.11:1057,33,0	0/0:13,0:13:39.12:0,39,2085	0/0:21,0:21:60.19:0,60,3150	1/1:11,12:23:36.07:1036,36,0	1/1:3,18:21:39.13:1391,39,0	1/1:4,14:18:42.14:1375,42,0	1/1:1,12:14:24.08:792,24,0	1/1:1,15:16:39.13:1344,39,0	1/1:2,15:17:45.15:1584,45,0	1/1:1,22:23:57.20:1986,57,0	1/1:2,31:33:78.27:2653,78,0	1/1:0,19:19:51.18:1819,51,0	0/0:39,0:39:99:0,117,6554	1/1:2,8:10:21.07:749,21,0	1/1:6,13:19:39.12:1285,39,0	1/1:3,17:20:42.14:1465,42,0	1/1:1,5:6:12.51:381,13,0	1/1:1,15:16:24.08:813,24,0	1/1:7,9:15:18.06:574,18,0	1/1:0,18:18:30.10:1046,30,0	1/1:3,16:19:36.12:1258,36,0	1/1:5,22:27:63.22:2186,63,0	1/1:3,21:24:51.18:1818,51,0	1/1:0,3:2:6.02:214,6,0
chr10	79678949	.	AGTCAATCATG	A	32343.40	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=16.879;DP=530;FS=3.593;HRun=0;HaplotypeScore=208.8024;InbreedingCoeff=0.9649;MQ=90.88;MQ0=0;MQRankSum=-16.447;QD=87.89;ReadPosRankSum=5.070;VQSLOD=4.5737;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:57.20:1897,57,0	1/1:0,12:12:33.11:1149,33,0	0/0:38,0:38:99:0,114,4841	0/0:30,0:30:90.27:0,90,4060	1/1:0,15:15:41.96:1153,42,0	0/0:19,0:19:57.20:0,57,3017	0/0:22,0:22:66.21:0,66,3385	1/1:0,16:16:48.12:1435,48,0	1/1:0,20:20:57.20:1982,57,0	1/1:0,17:17:51.16:1699,51,0	1/1:0,11:11:23.97:629,24,0	1/1:0,22:22:60.21:2080,60,0	1/1:0,23:23:66.23:2299,66,0	1/1:0,24:25:63.22:2194,63,0	1/1:0,21:21:57.20:1986,57,0	1/1:0,28:28:75.26:2590,75,0	0/0:24,0:24:72.25:0,72,3751	1/1:0,4:4:9.03:314,9,0	1/1:0,8:8:24.05:599,24,0	1/1:0,18:18:45.15:1535,45,0	1/1:0,13:13:18.06:618,18,0	1/1:0,13:13:33.11:1107,33,0	1/1:0,14:14:36.12:1254,36,0	1/1:0,16:16:27.09:907,27,0	0/0:29,0:29:84.29:0,84,4568	1/1:0,24:24:72.25:2431,72,0	1/1:0,23:23:66.23:2276,66,0	1/1:0,2:2:6.02:209,6,0
chr10	79679125	.	A	AAAAAG	31394.56	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-15.622;DP=749;FS=1.273;HRun=0;HaplotypeScore=125.9380;InbreedingCoeff=0.9996;MQ=84.13;MQ0=0;MQRankSum=-9.756;QD=68.25;ReadPosRankSum=0.055;VQSLOD=6.0093;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:26:57.14:1585,57,0	1/1:1,16:18:44.58:1216,45,0	0/0:33,0:33:79.87:0,80,1414	0/0:26,0:27:54.14:0,54,937	1/1:6,25:33:81.23:2275,81,0	0/0:24,0:23:69.18:0,69,1327	0/0:24,0:24:63.15:0,63,1077	1/1:10,27:41:99:2674,111,0	1/1:4,15:21:51.18:1481,51,0	1/1:3,29:33:90.05:2591,90,0	1/1:5,24:30:75.21:2023,75,0	0/0:23,0:23:63.22:0,63,1267	0/0:22,0:22:60.15:0,60,1131	0/0:28,0:28:78.18:0,78,1479	1/1:1,23:24:57.20:1663,57,0	1/1:3,20:24:51.18:1487,51,0	0/0:33,0:33:90.17:0,90,1722	1/1:0,10:10:24.08:731,24,0	1/1:6,16:25:69.14:1605,69,0	1/1:8,30:38:93.21:2629,93,0	1/1:4,22:26:60.21:1705,60,0	0/0:33,0:33:93.29:0,93,1812	0/0:17,0:17:50.74:0,51,922	0/0:25,0:25:60.19:0,60,1170	1/1:4,20:25:51.17:1551,51,0	1/1:5,32:39:99:3066,105,0	1/1:6,27:34:78.27:2289,78,0	1/1:1,10:12:27.09:822,27,0
chr10	79680712	.	A	ATGTGTGTGTG	12231.03	PASS	AB=1.000;AC=43;AF=0.796;AN=54;BaseQRankSum=-2.864;DP=527;FS=5.714;HRun=0;HaplotypeScore=117.4957;InbreedingCoeff=0.7423;MQ=55.68;MQ0=12;MQRankSum=-4.453;QD=30.50;ReadPosRankSum=-0.051;VQSLOD=3.9032;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:21:0:0,0,1	1/1:0,3:6:3.01:152,3,0	0/0:36,0:19:38.61:0,39,438	0/0:20,0:9:15.93:0,16,280	1/1:0,21:23:24.08:1215,24,0	0/0:22,0:22:54.10:0,54,1283	0/0:17,0:18:39.09:0,39,914	1/1:37,0:35:57.07:1276,57,0	1/1:1,9:14:18.06:913,18,0	1/1:3,8:21:39.04:799,39,0	1/1:2,8:15:12.04:608,12,0	1/1:2,0:14:9.03:394,9,0	1/1:4,0:11:6.02:263,6,0	1/1:14,0:12:9:180,9,0	1/1:2,9:13:9.03:396,9,0	1/1:5,8:19:15.05:700,15,0	0/0:13,0:13:27.03:0,27,601	1/1:3,5:11:9.03:347,9,0	1/1:8,8:22:51.07:1387,51,0	1/1:9,14:28:18.06:913,18,0	1/1:14,0:14:14.37:233,14,0	./.	1/1:18,0:12:1.72:22,2,0	1/1:5,0:21:3.01:131,3,0	1/1:2,0:11:6.02:263,6,0	1/1:5,11:22:44.60:789,45,0	1/1:8,11:23:18.53:855,19,0	1/1:4,5:11:9.03:396,9,0
chr10	79683489	.	C	CCTAT	3496.18	PASS	AB=0.636;AC=11;AF=0.204;AN=54;BaseQRankSum=-3.251;DP=644;FS=8.657;HRun=0;HaplotypeScore=121.1609;InbreedingCoeff=0.8094;MQ=74.51;MQ0=1;MQRankSum=-1.241;QD=28.42;ReadPosRankSum=-2.584;VQSLOD=2.5802;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:31:38.54:0,39,345	0/0:7,0:7:6.02:0,6,94	./.	0/0:24,0:21:3:0,3,28	0/0:33,0:34:63.19:0,63,943	1/1:12,14:27:39.13:924,39,0	1/1:9,3:15:20.93:378,21,0	0/0:31,0:31:18.06:0,18,275	0/0:17,0:18:39.13:0,39,592	0/0:16,0:16:33.11:0,33,494	0/0:24,0:24:39.13:0,39,610	0/0:19,0:19:16.03:0,16,453	0/0:19,0:19:36.12:0,36,559	0/0:16,0:16:24.08:0,24,376	0/0:15,0:15:36.10:0,36,521	0/0:21,0:21:45.14:0,45,673	0/1:12,15:28:73.24:709,0,73	0/0:29,0:29:57.19:0,57,857	0/0:14,0:14:14.33:0,14,234	0/0:37,0:37:63.20:0,63,959	0/0:24,0:27:39.11:0,39,553	0/0:22,0:22:30.09:0,30,448	0/0:35,0:35:54.18:0,54,846	0/0:17,0:17:36.11:0,36,541	1/1:15,0:21:21.07:365,21,0	1/1:11,13:24:45.15:1025,45,0	0/0:34,0:34:78.24:0,78,1173	1/1:6,1:7:9.82:95,10,0
chr10	79684230	.	AAAACAAAC	A	1393.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.247;DP=662;FS=0.850;HRun=0;HaplotypeScore=167.1240;InbreedingCoeff=0.8973;MQ=67.75;MQ0=0;MQRankSum=-5.023;QD=44.95;ReadPosRankSum=-0.102;VQSLOD=3.5706;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,18:30:63.22:1488,63,0	0/0:10,0:10:21.07:0,21,820	0/0:20,0:18:21.95:0,22,560	0/0:26,0:23:26.92:0,27,563	0/0:37,0:37:78.25:0,78,2916	0/0:21,0:21:54.17:0,54,2010	0/0:22,0:22:48.16:0,48,1788	0/0:25,0:25:39.10:0,39,1152	0/0:18,0:18:48.16:0,48,1742	0/0:40,0:40:90.31:0,90,3464	0/0:21,0:21:57.09:0,57,2046	0/0:29,0:29:63.20:0,63,2274	0/0:20,0:20:42.13:0,42,1563	0/0:19,0:19:36.12:0,36,1459	0/0:32,0:32:69.24:0,69,2669	0/0:29,0:29:63.22:0,63,2462	0/0:32,0:32:66.20:0,66,2382	0/0:23,0:22:51.15:0,51,1888	0/0:19,0:17:36.12:0,36,1448	0/0:26,0:26:57.20:0,57,2300	0/0:11,0:11:27.09:0,27,1075	0/0:24,0:24:54.19:0,54,2101	0/0:25,0:25:54.19:0,54,2099	0/0:24,0:24:60.21:0,60,2381	0/0:17,0:23:45.15:0,45,1392	0/0:24,0:24:45.13:0,45,1614	0/0:26,0:26:54.19:0,54,2184	0/0:5,0:5:6.02:0,6,249
chr10	79685381	.	T	TTTGTTGTTG	23593.48	PASS	AB=0.594;AC=45;AF=0.804;AN=56;BaseQRankSum=-1.555;DP=656;FS=0.000;HRun=0;HaplotypeScore=164.6837;InbreedingCoeff=0.8852;MQ=58.48;MQ0=4;MQRankSum=-11.341;QD=46.72;ReadPosRankSum=1.301;VQSLOD=4.6773;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:32:21.07:625,21,0	1/1:6,0:6:9.03:271,9,0	0/0:39,0:34:41.37:0,41,1459	0/0:36,0:35:24.84:0,25,1475	1/1:4,12:18:21.07:894,21,0	0/0:28,0:28:60.20:0,60,1610	0/0:21,0:21:36.12:0,36,1010	1/1:40,0:39:69.16:2014,69,0	1/1:7,9:16:21.07:972,21,0	1/1:4,15:24:41.97:1658,42,0	1/1:10,11:21:30.10:1304,30,0	1/1:7,0:18:30.10:580,30,0	1/1:5,0:22:20.92:406,21,0	1/1:10,0:29:48.16:923,48,0	1/1:7,15:23:21:853,21,0	1/1:3,13:19:24.08:1114,24,0	0/0:26,0:26:60.21:0,60,1604	0/1:6,8:19:4.51:341,0,5	1/1:3,7:10:27.09:1084,27,0	1/1:5,16:21:39.13:1809,39,0	1/1:10,12:24:18.06:651,18,0	1/1:3,0:18:39.13:734,39,0	1/1:8,0:27:51.17:971,51,0	1/1:11,0:20:12.04:224,12,0	1/1:4,0:13:15.05:290,15,0	1/1:6,20:30:66.23:2449,66,0	1/1:14,25:40:60.20:2588,60,0	1/1:4,6:10:19.88:840,20,0
chr10	79685826	.	CT	C	545.89	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.772;DP=789;FS=1.929;HRun=5;HaplotypeScore=74.7054;InbreedingCoeff=0.9996;MQ=69.76;MQ0=0;MQRankSum=-1.429;QD=22.75;ReadPosRankSum=0.557;VQSLOD=2.6371;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:53.82:641,54,0	0/0:13,0:13:36.12:0,36,490	0/0:24,0:22:56.30:0,56,683	0/0:24,0:24:57.19:0,57,759	0/0:39,0:39:99:0,108,1456	0/0:38,0:38:99:0,108,1452	0/0:23,0:23:60.13:0,60,755	0/0:41,0:41:99:0,114,1502	0/0:27,0:27:75.25:0,75,1018	0/0:27,0:27:75.24:0,75,1005	0/0:20,0:20:57.18:0,57,755	0/0:33,0:33:96.32:0,96,1299	0/0:26,0:26:78.26:0,78,1064	0/0:33,0:33:96.24:0,96,1264	0/0:38,0:38:99:0,111,1480	0/0:25,0:25:75.24:0,75,1007	0/0:34,0:34:93.31:0,93,1266	0/0:15,0:15:42.14:0,42,569	0/0:35,0:35:78.26:0,78,1048	0/0:30,0:30:81.27:0,81,1103	0/0:39,0:39:99:0,110,1452	0/0:25,0:25:69.23:0,69,936	0/0:22,0:22:60.20:0,60,815	0/0:26,0:26:68.04:0,68,907	0/0:18,0:18:51.17:0,51,695	0/0:35,0:35:99:0,99,1341	0/0:36,0:36:99:0,101,1327	0/0:19,0:19:33.11:0,33,449
chr10	79685961	.	GTTC	G	6928.90	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=17.900;DP=680;FS=5.921;HRun=0;HaplotypeScore=110.2386;InbreedingCoeff=1.0000;MQ=80.50;MQ0=0;MQRankSum=-3.757;QD=39.15;ReadPosRankSum=2.015;VQSLOD=6.1086;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.16:0,57,1220	0/0:14,0:14:42.14:0,42,945	0/0:20,0:20:57.19:0,57,1232	0/0:17,0:17:37.73:0,38,903	0/0:32,0:32:93.31:0,93,2098	0/0:27,0:27:78.27:0,78,1798	0/0:16,0:16:45.14:0,45,992	0/0:27,0:27:81.23:0,81,1628	0/0:17,0:17:51.18:0,51,1170	0/0:41,0:41:99:0,120,2760	0/0:30,0:30:84.29:0,84,1908	1/1:0,27:27:63.04:988,63,0	1/1:0,21:21:60.21:1021,60,0	1/1:0,23:23:54.18:918,54,0	0/0:30,0:30:90.30:0,90,2027	0/0:27,0:27:78.25:0,78,1752	0/0:17,0:17:48.12:0,48,1056	0/0:14,0:14:42.14:0,42,940	0/0:19,0:19:57.19:0,57,1270	0/0:29,0:29:87.28:0,87,1915	0/0:18,0:18:54.19:0,54,1217	1/1:1,24:25:59.94:866,60,0	1/1:0,29:29:74.99:1106,75,0	1/1:0,21:21:45.15:767,45,0	1/1:1,30:31:78.20:1263,78,0	0/0:35,0:35:99:0,102,2168	0/0:31,0:31:90.29:0,90,1985	0/0:21,0:21:54.08:0,54,1087
chr10	79686352	.	AACTG	A	576.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.111;DP=616;FS=1.123;HRun=0;HaplotypeScore=96.8915;InbreedingCoeff=0.9692;MQ=64.44;MQ0=0;MQRankSum=-1.206;QD=41.21;ReadPosRankSum=0.299;VQSLOD=3.7029;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.29:0,84,2172	0/0:13,0:13:39.13:0,39,1029	0/0:22,0:21:52.64:0,53,1250	0/0:17,0:17:48.16:0,48,1209	0/0:34,0:34:87.30:0,87,2280	0/0:24,0:24:69.24:0,69,1824	0/0:18,0:18:54.19:0,54,1398	0/0:36,0:36:99:0,99,2532	0/0:18,0:18:54.19:0,54,1398	0/0:18,0:18:51.17:0,51,1291	0/0:28,0:28:69.24:0,69,1839	0/0:19,0:19:54.19:0,54,1373	0/0:29,0:29:87.30:0,87,2232	0/0:31,0:31:84.29:0,84,2233	0/0:30,0:30:87.30:0,87,2321	0/0:18,0:18:54.19:0,54,1406	0/0:22,0:22:66.21:0,66,1665	0/0:6,0:6:15.05:0,15,399	0/0:18,0:18:54.19:0,54,1417	0/0:28,0:28:75.26:0,75,1957	0/0:29,0:29:81.28:0,81,2128	0/0:28,0:28:81.26:0,81,2073	0/0:21,0:21:54.19:0,54,1439	0/0:16,0:16:48.15:0,48,1224	1/1:1,13:14:36.12:672,36,0	0/0:25,0:25:72.23:0,72,1785	0/0:20,0:19:57.20:0,57,1506	0/0:5,0:5:15.05:0,15,400
chr10	79686667	.	CA	C	13492.06	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=12.390;DP=704;FS=4.233;HRun=3;HaplotypeScore=180.5105;InbreedingCoeff=0.9995;MQ=73.59;MQ0=0;MQRankSum=-3.150;QD=34.42;ReadPosRankSum=-0.026;VQSLOD=3.4997;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.22:0,69,966	1/1:0,13:13:36.11:446,36,0	0/0:20,0:20:60.18:0,60,799	0/0:10,0:10:24.03:0,24,306	1/1:2,25:27:60.17:743,60,0	0/0:29,0:29:87.28:0,87,1232	0/0:15,0:15:42.14:0,42,605	1/1:1,37:38:99:1363,111,0	1/1:0,22:22:63.20:779,63,0	1/1:0,33:33:99:1227,99,0	1/1:1,25:26:78.20:947,78,0	0/0:37,0:37:99:0,102,1444	0/0:41,0:40:99:0,117,1657	0/0:31,0:31:78.18:0,78,1076	1/1:0,37:37:99:1374,111,0	1/1:5,30:35:93.27:1128,93,0	0/0:26,0:26:72.24:0,72,1026	1/1:0,9:9:27.08:334,27,0	1/1:1,13:14:42.12:511,42,0	1/1:1,44:45:99:1633,132,0	1/1:1,22:23:66.19:804,66,0	0/0:20,0:20:54.18:0,54,773	0/0:21,0:21:57.17:0,57,781	0/0:13,0:13:30.03:0,30,408	0/0:25,0:25:75.25:0,75,1080	1/1:4,22:26:63.19:771,63,0	1/1:3,29:32:81.25:1002,81,0	1/1:3,9:12:36.09:429,36,0
chr10	79686696	.	TA	T	6809.69	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-7.617;DP=748;FS=9.012;HRun=1;HaplotypeScore=251.4331;InbreedingCoeff=0.9789;MQ=69.19;MQ0=2;MQRankSum=-4.039;QD=34.92;ReadPosRankSum=3.947;VQSLOD=3.0339;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.17:0,51,811	0/0:20,0:20:57.19:0,57,910	0/0:23,0:22:63.02:0,63,886	0/0:23,0:21:5.72:0,6,601	0/0:23,0:23:57.19:0,57,905	0/0:32,0:32:96.31:0,96,1508	0/0:19,0:19:57.19:0,57,911	0/0:36,0:36:99:0,105,1647	0/0:23,0:23:66.23:0,66,1054	0/0:30,0:30:90.31:0,90,1436	0/0:24,0:24:63.21:0,63,1005	1/1:3,34:37:99:1403,102,0	1/1:5,38:42:99:1608,117,0	1/1:0,30:30:75.25:1045,75,0	0/0:45,0:45:99:0,123,1910	0/0:35,0:35:99:0,102,1598	0/0:29,0:29:81.25:0,81,1261	0/0:10,0:10:27.09:0,27,431	0/0:14,0:14:42.10:0,42,642	0/0:42,0:42:99:0,117,1813	0/0:27,0:27:75.24:0,75,1174	1/1:1,21:22:54.16:736,54,0	1/1:1,19:20:51.06:695,51,0	1/1:0,15:15:20.79:292,21,0	1/1:3,25:28:75.22:1030,75,0	0/0:32,0:32:84.28:0,84,1320	0/0:37,0:37:99:0,102,1623	0/0:9,0:9:27.09:0,27,432
chr10	79686713	.	ATG	A	11765.19	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-1.266;DP=778;FS=0.303;HRun=0;HaplotypeScore=265.8986;InbreedingCoeff=0.9983;MQ=61.42;MQ0=3;MQRankSum=-2.094;QD=26.80;ReadPosRankSum=0.517;VQSLOD=4.4710;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:33.11:439,33,0	1/1:4,14:18:39.09:499,39,0	0/0:23,0:19:38.74:0,39,534	0/0:25,0:21:46.30:0,46,613	1/1:6,20:26:38.90:470,39,0	0/0:32,0:32:84.26:0,84,1380	0/0:22,0:22:54.16:0,54,867	1/1:17,17:34:81.06:929,81,0	1/1:6,18:24:63.10:769,63,0	1/1:15,20:35:55.90:1044,56,0	1/1:3,24:27:47.67:621,48,0	0/0:44,0:44:99:0,114,1773	0/0:38,0:38:93.25:0,93,1488	0/0:37,0:37:99:0,102,1687	1/1:9,40:49:98.68:1369,99,0	1/1:2,33:35:78.26:1031,78,0	0/0:25,0:25:48.14:0,48,800	1/1:3,7:10:18.95:241,19,0	1/1:5,8:13:30.08:382,30,0	1/1:13,29:42:59.66:732,60,0	1/1:7,18:25:54.16:701,54,0	0/0:23,0:23:66.21:0,66,1102	0/0:26,0:26:66.19:0,66,1081	0/0:19,0:19:20.57:0,21,362	0/0:25,0:25:65.83:0,66,1139	1/1:3,30:33:87.26:1109,87,0	1/1:13,21:34:74.99:952,75,0	1/1:0,13:13:36.12:479,36,0
chr10	79686749	.	A	AT	8629.64	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=4.517;DP=838;FS=2.518;HRun=1;HaplotypeScore=248.1323;InbreedingCoeff=0.9998;MQ=61.21;MQ0=2;MQRankSum=-3.806;QD=38.18;ReadPosRankSum=-2.628;VQSLOD=3.5786;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:63.18:0,63,801	0/0:17,0:17:51.17:0,51,662	0/0:31,0:26:65.83:0,66,890	0/0:25,0:21:57.16:0,57,722	0/0:27,0:27:54.16:0,54,700	0/0:27,0:27:81.25:0,81,1038	0/0:22,0:22:63.19:0,63,804	0/0:47,0:47:99:0,135,1728	0/0:32,0:32:87.27:0,87,1114	0/0:35,0:35:99:0,102,1313	0/0:25,0:25:57.10:0,57,740	1/1:4,41:45:99:1704,112,0	1/1:1,35:36:99:1478,102,0	1/1:2,33:35:96.28:1411,96,0	0/0:67,0:67:99:0,166,2114	0/0:40,0:40:99:0,108,1387	0/0:20,0:20:60.20:0,60,779	0/0:12,0:12:36.12:0,36,467	0/0:10,0:9:27.09:0,27,350	0/0:35,0:35:93.28:0,93,1190	0/0:32,0:31:87.26:0,87,1130	1/1:4,27:31:78.25:1167,78,0	1/1:1,28:29:87.23:1259,87,0	1/1:2,20:22:38.90:532,39,0	1/1:4,24:28:75.19:1079,75,0	0/0:35,0:35:99:0,99,1254	0/0:33,0:33:96.31:0,96,1244	0/0:13,0:13:39.13:0,39,506
chr10	79687586	.	A	ACT	24686.21	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-0.820;DP=562;FS=15.551;HRun=0;HaplotypeScore=84.6319;InbreedingCoeff=0.9989;MQ=79.12;MQ0=5;MQRankSum=-4.924;QD=50.79;ReadPosRankSum=2.883;VQSLOD=4.3434;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:78.27:1442,78,0	1/1:0,13:13:30.10:558,30,0	0/0:17,0:17:42.14:0,42,597	0/0:11,0:11:27.09:0,27,394	1/1:1,19:19:54.19:1011,54,0	0/0:18,0:18:54.12:0,54,747	0/0:12,0:12:36.12:0,36,530	1/1:2,33:35:99:1755,99,0	1/1:0,19:19:57.20:1068,57,0	1/1:2,13:14:42.14:787,42,0	1/1:1,27:28:78.27:1440,78,0	1/1:1,10:11:30.10:561,30,0	1/1:3,20:23:63.22:1179,63,0	1/1:0,12:12:36.12:674,36,0	1/1:1,18:19:45.15:843,45,0	1/1:0,21:20:60.21:1124,60,0	0/0:18,0:18:51.17:0,51,751	1/1:4,11:16:29.93:558,30,0	1/1:1,15:17:48.16:899,48,0	1/1:1,28:30:84.29:1569,84,0	1/1:0,20:20:60.21:1124,60,0	1/1:2,9:11:30.10:551,30,0	1/1:0,29:29:78.27:1461,78,0	1/1:0,10:10:27.09:505,27,0	1/1:2,36:38:99:2114,114,0	1/1:1,22:24:69.21:1219,69,0	1/1:1,33:33:87.30:1629,87,0	1/1:0,11:11:33.11:618,33,0
chr10	79687866	.	C	CA	6812.75	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=5.756;DP=596;FS=9.614;HRun=8;HaplotypeScore=160.3266;InbreedingCoeff=0.8532;MQ=71.89;MQ0=0;MQRankSum=-7.001;QD=13.82;ReadPosRankSum=1.158;VQSLOD=3.2540;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:4.61:5,0,148	1/1:3,0:10:17.04:86,17,0	0/0:19,0:18:37.46:0,37,305	0/0:27,1:23:24.81:0,25,349	1/1:15,0:36:56.76:298,57,0	0/0:25,0:26:71.07:0,71,637	0/0:13,0:13:29.99:0,30,269	1/1:9,0:27:47.75:243,48,0	1/1:3,0:10:8.36:43,8,0	1/1:6,2:20:43.36:254,43,0	1/1:5,0:22:47.88:251,48,0	1/1:2,21:23:57.17:658,57,0	1/1:2,10:12:24.07:277,24,0	1/1:0,19:19:48.14:554,48,0	1/1:6,1:21:32.04:163,32,0	1/1:5,1:22:25.98:126,26,0	0/0:16,0:16:36.02:0,36,330	1/1:9,0:12:8.35:53,8,0	1/1:12,0:21:39.80:209,40,0	1/1:8,1:32:56.52:312,57,0	1/1:8,0:8:5.20:23,5,0	1/1:2,18:20:45.13:519,45,0	1/1:4,25:29:72.21:831,72,0	1/1:1,17:18:48.14:554,48,0	1/1:3,27:30:66.20:762,66,0	1/1:9,0:29:49.24:270,49,0	1/1:8,0:36:51.44:268,51,0	1/1:3,0:9:8.88:54,9,0
chr10	79687870	.	A	AAAAAT	9154.31	PASS	AB=0.983;AC=27;AF=0.482;AN=56;BaseQRankSum=10.284;DP=573;FS=0.346;HRun=0;HaplotypeScore=181.3719;InbreedingCoeff=0.6355;MQ=70.47;MQ0=0;MQRankSum=-13.585;QD=28.70;ReadPosRankSum=-0.855;VQSLOD=4.3595;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,12:25:60.12:1231,60,0	1/1:10,0:10:17.98:245,18,0	0/0:21,0:19:31.14:0,31,527	0/0:26,0:20:7.12:0,7,630	0/1:31,0:31:4.11:880,0,4	0/0:28,0:28:75.22:0,75,1316	0/0:13,0:13:30.08:0,30,518	1/1:28,0:28:14.12:740,14,0	0/1:11,0:11:62.45:119,0,62	1/1:19,0:19:17.28:607,17,0	1/1:23,0:22:24.44:726,24,0	0/0:24,0:24:62.16:0,62,413	0/0:13,0:13:26.65:0,27,178	0/0:19,0:19:47.30:0,47,303	0/1:21,0:21:12.25:544,0,12	1/1:18,0:18:27.09:449,27,0	0/0:14,0:14:36.12:0,36,686	0/1:10,0:11:20.30:226,0,20	1/1:20,0:20:5.93:595,6,0	1/1:28,0:28:48.14:936,48,0	0/1:7,0:7:15.40:116,0,15	0/0:20,0:20:50.27:0,50,324	0/0:29,0:29:79.90:0,80,524	0/0:18,0:18:47.30:0,47,303	0/0:29,0:29:63.84:0,64,422	1/1:25,0:25:25.62:661,26,0	1/1:33,0:33:60.20:888,60,0	1/1:9,0:9:16.34:192,16,0
chr10	79687879	.	CA	C	406.16	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.831;DP=563;FS=3.108;HRun=4;HaplotypeScore=138.2994;InbreedingCoeff=0.9778;MQ=66.71;MQ0=0;MQRankSum=-4.111;QD=16.25;ReadPosRankSum=0.039;VQSLOD=2.6390;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,16:25:54.81:501,55,0	0/0:9,0:9:21.07:0,21,290	0/0:20,0:18:44.71:0,45,563	0/0:24,0:19:47.56:0,48,596	0/0:28,0:28:81.21:0,81,1067	0/0:30,0:30:87.27:0,87,1183	0/0:12,0:12:36.12:0,36,503	0/0:29,0:28:78.01:0,78,985	0/0:15,0:15:36.12:0,36,500	0/0:19,0:19:57.18:0,57,778	0/0:21,0:20:57.12:0,57,744	0/0:26,0:26:72.23:0,72,990	0/0:13,0:13:33.11:0,33,462	0/0:20,0:20:57.19:0,57,797	0/0:21,0:21:48.03:0,48,622	0/0:19,0:19:41.69:0,42,500	0/0:14,0:14:39.12:0,39,526	0/0:9,0:9:24.08:0,24,333	0/0:24,0:24:69.12:0,69,905	0/0:27,0:27:71.47:0,71,893	0/0:8,0:8:18.06:0,18,226	0/0:18,0:18:51.17:0,51,714	0/0:32,0:32:96.28:0,96,1287	0/0:18,0:18:51.17:0,51,712	0/0:25,0:25:66.21:0,66,909	0/0:21,0:21:57.16:0,57,755	0/0:27,0:27:65.58:0,66,881	0/0:9,0:9:18.06:0,18,245
chr10	79688791	.	CT	C	9683.53	PASS	AB=0.520;AC=31;AF=0.554;AN=56;BaseQRankSum=16.360;DP=607;FS=0.997;HRun=6;HaplotypeScore=150.9955;InbreedingCoeff=0.9475;MQ=76.77;MQ0=0;MQRankSum=-3.898;QD=27.99;ReadPosRankSum=0.449;VQSLOD=2.6770;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:48.11:516,48,0	0/1:1,12:13:3.49:318,0,3	0/0:23,0:23:29.09:0,29,587	0/0:20,0:19:45.01:0,45,547	1/1:0,31:31:75.14:793,75,0	0/0:24,0:24:69.22:0,69,894	0/0:20,0:20:60.18:0,60,776	1/1:5,32:37:96.18:1016,96,0	1/1:0,24:24:72.18:773,72,0	1/1:2,25:27:75.18:805,75,0	1/1:0,27:27:69.16:737,69,0	0/0:20,0:20:57.18:0,57,737	0/0:24,0:24:69.22:0,69,905	0/0:25,0:25:66.21:0,66,868	1/1:3,13:16:39.08:419,39,0	1/1:2,27:29:81.18:870,81,0	0/0:16,0:16:42.14:0,42,553	1/1:0,10:10:27.07:290,27,0	1/1:7,10:17:36.03:375,36,0	1/1:2,36:38:99:1160,108,0	1/1:0,16:16:42.10:451,42,0	0/0:24,0:24:66.20:0,66,854	0/0:23,0:23:63.20:0,63,829	0/0:20,0:20:51.16:0,51,657	0/0:22,0:22:66.21:0,66,869	1/1:0,20:20:60.15:644,60,0	1/1:3,12:15:33.08:355,33,0	1/1:2,5:7:15.02:161,15,0
chr10	79688936	.	A	AG	7845.80	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.782;DP=649;FS=0.326;HRun=2;HaplotypeScore=89.2548;InbreedingCoeff=0.9994;MQ=86.67;MQ0=0;MQRankSum=-6.602;QD=44.33;ReadPosRankSum=4.003;VQSLOD=4.0310;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.16:0,48,666	0/0:8,0:8:24.08:0,24,336	0/0:24,0:24:66.20:0,66,900	0/0:20,0:20:55.23:0,55,783	0/0:37,0:37:99:0,111,1532	0/0:23,0:23:69.23:0,69,961	0/0:14,0:13:42.14:0,42,587	0/0:39,0:39:99:0,111,1532	0/0:26,0:26:75.24:0,75,1030	0/0:21,0:21:63.21:0,63,866	0/0:31,0:31:93.31:0,93,1299	1/1:0,24:24:63.21:1004,63,0	1/1:0,28:28:72.25:1147,72,0	1/1:0,21:21:60.20:959,60,0	0/0:35,0:35:99:0,105,1461	0/0:25,0:25:75.25:0,75,1046	0/0:15,0:15:45.15:0,45,627	0/0:15,0:15:41.97:0,42,553	0/0:14,0:14:42.10:0,42,565	0/0:29,0:29:84.27:0,84,1157	0/0:19,0:19:54.18:0,54,755	1/1:0,30:30:87.30:1391,87,0	1/1:0,27:28:81.28:1282,81,0	1/1:0,25:25:72.25:1151,72,0	1/1:0,21:21:57.19:911,57,0	0/0:23,0:23:69.23:0,69,965	0/0:26,0:26:78.26:0,78,1087	0/0:10,0:10:27.09:0,27,378
chr10	79690519	.	A	AAAAAAAAAG	8177.28	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-8.493;DP=594;FS=4.656;HRun=0;HaplotypeScore=148.8379;InbreedingCoeff=0.9906;MQ=64.52;MQ0=3;MQRankSum=-10.906;QD=57.99;ReadPosRankSum=2.205;VQSLOD=4.4480;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:78.15:0,78,2001	0/0:11,0:11:33.11:0,33,910	0/0:33,0:20:39.08:0,39,944	0/0:21,0:15:25.51:0,26,629	0/0:33,0:33:99:0,99,2478	0/0:18,0:18:54.19:0,54,1545	0/0:17,0:17:51.10:0,51,1223	0/0:26,0:26:72.18:0,72,1454	0/0:22,0:22:66.18:0,66,1658	0/0:28,0:28:81.22:0,81,2012	0/0:19,0:19:51.13:0,51,1289	1/1:2,12:21:16.87:695,17,0	1/1:2,11:19:33.11:1588,33,0	1/1:1,13:18:24.08:1161,24,0	0/0:39,0:38:99:0,111,2798	0/0:13,0:13:32.99:0,33,746	0/0:21,0:21:57.03:0,57,1331	0/0:10,0:10:24.08:0,24,574	0/0:22,0:22:63.14:0,63,1314	0/0:28,0:28:81.23:0,81,2021	0/0:9,0:9:27.09:0,27,739	1/1:2,12:13:27.09:1141,27,0	1/1:3,12:25:25.33:1108,25,0	1/1:3,7:14:12.01:456,12,0	1/1:2,21:29:42.14:2027,42,0	0/0:22,0:22:62.95:0,63,1551	0/0:17,0:17:48.14:0,48,1158	0/0:13,0:12:36.09:0,36,870
chr10	79691317	.	AT	A	4238.32	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=16.066;DP=674;FS=21.662;HRun=1;HaplotypeScore=93.0871;InbreedingCoeff=0.9989;MQ=93.77;MQ0=0;MQRankSum=-12.259;QD=33.64;ReadPosRankSum=1.169;VQSLOD=3.1446;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1853	0/0:11,0:11:33.11:0,33,528	0/0:36,0:36:99:0,108,1665	0/0:27,0:27:78.26:0,78,1221	0/0:30,0:30:87.30:0,87,1388	0/0:30,0:30:90.27:0,90,1391	0/0:23,0:23:69.24:0,69,1103	0/0:36,0:36:99:0,105,1655	0/0:22,0:22:66.21:0,66,1029	0/0:21,0:21:63.17:0,63,979	0/0:26,0:26:78.27:0,78,1247	1/1:0,13:13:39.12:496,39,0	1/1:0,20:20:48.15:610,48,0	1/1:1,22:23:63.20:805,63,0	0/0:26,0:26:78.27:0,78,1247	0/0:26,0:26:78.27:0,78,1245	0/0:28,0:28:84.29:0,84,1333	0/0:18,0:18:54.17:0,54,835	0/0:17,0:17:51.17:0,51,791	0/0:28,0:28:81.26:0,81,1264	0/0:36,0:36:99:0,108,1669	1/1:2,14:16:25.24:502,25,0	1/1:2,18:20:57.16:710,57,0	1/1:1,14:15:35.72:439,36,0	1/1:1,18:19:54.16:678,54,0	0/0:26,0:26:78.25:0,78,1206	0/0:34,0:34:99:0,102,1631	0/0:7,0:7:21.07:0,21,319
chr10	79691358	.	AC	A	6053.31	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.826;DP=681;FS=20.913;HRun=1;HaplotypeScore=90.8047;InbreedingCoeff=0.9998;MQ=81.14;MQ0=0;MQRankSum=-9.435;QD=37.60;ReadPosRankSum=1.216;VQSLOD=3.0092;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1856	0/0:15,0:15:45.15:0,45,713	0/0:21,0:21:63.15:0,63,899	0/0:20,0:20:55.16:0,55,824	0/0:24,0:24:72.25:0,72,1151	0/0:29,0:28:87.28:0,87,1363	0/0:24,0:24:72.21:0,72,1104	0/0:30,0:30:87.28:0,87,1349	0/0:21,0:21:63.20:0,63,969	0/0:26,0:26:78.24:0,78,1216	0/0:22,0:22:66.21:0,66,1030	1/1:0,27:27:69.23:964,69,0	1/1:0,22:22:57.19:796,57,0	1/1:1,33:34:99:1363,99,0	0/0:31,0:31:93.28:0,93,1454	0/0:19,0:19:57.18:0,57,887	0/0:31,0:31:93.28:0,93,1426	0/0:11,0:11:33.11:0,33,520	0/0:13,0:13:39.13:0,39,623	0/0:28,0:28:84.29:0,84,1343	0/0:34,0:34:99:0,102,1625	1/1:1,22:23:66.22:920,66,0	1/1:1,18:19:45.08:628,45,0	1/1:0,14:14:33.57:461,34,0	1/1:0,22:22:66.22:922,66,0	0/0:34,0:34:99:0,102,1604	0/0:37,0:37:99:0,111,1761	0/0:11,0:11:33.11:0,33,523
chr10	79691588	.	T	TA	10052.35	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-13.239;DP=615;FS=2.697;HRun=7;HaplotypeScore=74.5511;InbreedingCoeff=0.9940;MQ=68.88;MQ0=0;MQRankSum=-0.101;QD=29.65;ReadPosRankSum=0.558;VQSLOD=5.4034;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.11:0,66,637	1/1:2,14:16:39.08:449,39,0	0/0:14,0:14:27.10:0,27,330	0/0:13,0:11:16.55:0,17,140	1/1:4,22:26:66.20:797,66,0	0/0:22,0:21:60.10:0,60,579	0/0:18,0:18:45.03:0,45,422	1/1:8,20:28:60.16:700,60,0	1/1:4,23:27:57.17:689,57,0	1/1:1,22:23:63.18:745,63,0	1/1:2,21:23:63.19:756,63,0	0/0:25,0:25:71.32:0,71,667	0/0:28,0:28:72.10:0,72,693	0/0:25,0:25:60.09:0,60,579	1/1:3,19:22:45.14:544,45,0	1/1:3,12:15:33.10:399,33,0	0/0:13,0:13:30.04:0,30,290	1/1:0,18:18:54.17:652,54,0	1/1:2,21:23:66.20:795,66,0	1/1:3,21:24:60.12:702,60,0	1/1:1,20:21:45.14:544,45,0	0/0:28,0:28:81.13:0,81,782	0/0:25,0:25:60.06:0,60,572	0/0:14,0:14:42.07:0,42,406	0/0:28,0:28:72.09:0,72,686	1/1:4,28:32:81.25:979,81,0	1/1:3,34:37:96.29:1158,96,0	1/1:0,4:4:12.04:145,12,0
chr10	79692013	.	ATC	A	764.40	PASS	AB=0.989;AC=19;AF=0.339;AN=56;BaseQRankSum=9.360;DP=785;FS=15.145;HRun=0;HaplotypeScore=258.3639;InbreedingCoeff=0.2269;MQ=60.07;MQ0=27;MQRankSum=-1.108;QD=2.03;ReadPosRankSum=-0.478;VQSLOD=0.9059;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:63.04:0,63,913	0/1:17,0:17:19.22:19,0,369	0/0:26,0:24:52.35:0,52,982	0/0:14,0:13:29.93:0,30,414	0/1:36,0:36:44.10:44,0,322	0/0:25,0:25:72.22:0,72,1246	0/0:18,1:18:31.26:0,31,674	0/0:49,0:47:65.63:0,66,1691	0/1:24,0:24:10.73:11,0,221	0/0:47,0:45:4.95:0,5,1338	0/0:31,0:29:38.28:0,38,762	1/1:27,0:22:11.53:90,12,0	1/1:19,0:14:2.34:118,2,0	1/1:25,0:18:11.70:71,12,0	0/1:22,0:21:6.13:6,0,410	0/1:25,0:24:6.16:6,0,475	0/0:22,0:22:45.09:0,45,813	0/0:11,0:11:28.34:0,28,437	0/0:27,0:25:37.43:0,37,936	0/0:48,0:47:36.81:0,37,874	0/0:21,0:20:45.07:0,45,759	0/1:29,0:26:12.31:56,0,12	1/1:33,0:27:2.23:120,2,0	1/1:21,0:16:17.58:107,18,0	0/1:47,0:40:14.17:144,0,14	0/1:32,4:34:99:138,0,971	0/0:41,0:40:47.15:0,47,855	0/1:14,0:12:6.67:7,0,161
chr10	79692017	.	CTA	C	2374.45	PASS	AB=0.926;AC=22;AF=0.393;AN=56;BaseQRankSum=7.967;DP=778;FS=3.880;HRun=0;HaplotypeScore=251.8623;InbreedingCoeff=0.3733;MQ=57.02;MQ0=28;MQRankSum=-2.022;QD=5.08;ReadPosRankSum=-3.270;VQSLOD=2.6712;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:57:0,57,786	0/1:17,2:19:46.16:46,0,306	0/0:23,0:21:29.01:0,29,652	0/0:13,0:12:22.29:0,22,280	0/1:32,5:37:99:179,0,268	0/0:24,0:24:72.21:0,72,1172	0/0:18,0:17:30.31:0,30,609	0/1:49,2:50:40.32:40,0,1268	0/1:24,1:24:78.29:78,0,159	0/1:46,3:46:99:143,0,974	0/1:31,1:30:5.35:5,0,595	1/1:9,19:23:14.82:208,15,0	1/1:5,14:14:2.63:278,3,0	1/1:7,18:18:15.04:196,15,0	0/1:16,6:21:95.28:95,0,332	0/0:31,0:30:19.02:0,19,454	0/0:21,0:21:45.08:0,45,717	0/0:10,0:10:21.17:0,21,366	0/0:27,0:25:52.96:0,53,806	0/0:45,1:45:18.67:0,19,679	0/0:18,0:17:39.10:0,39,600	1/1:12,15:24:16.07:219,16,0	1/1:12,18:23:23.75:342,24,0	1/1:4,16:15:21.06:282,21,0	1/1:30,16:39:30.47:429,30,0	0/1:36,0:34:27.94:28,0,875	0/0:40,0:39:32.62:0,33,637	0/0:13,0:11:17.57:0,18,176
chr10	79692019	.	A	ATC	2664.30	PASS	AB=0.958;AC=24;AF=0.429;AN=56;BaseQRankSum=9.359;DP=820;FS=6.143;HRun=0;HaplotypeScore=291.6599;InbreedingCoeff=0.2759;MQ=53.89;MQ0=30;MQRankSum=-4.546;QD=5.02;ReadPosRankSum=-3.254;VQSLOD=1.7549;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:56.96:0,57,739	0/1:19,1:20:18.29:18,0,278	0/0:20,0:18:29.01:0,29,652	0/0:13,0:12:22.29:0,22,280	0/0:34,4:38:18.40:0,18,274	0/0:24,0:24:72.23:0,72,1074	0/0:21,0:20:44.49:0,44,620	0/1:57,0:54:57.10:57,0,1261	0/1:25,2:26:26.04:26,0,162	0/1:43,7:47:99:522,0,833	0/1:31,1:30:70.50:71,0,584	1/1:31,0:26:12.03:203,12,0	1/1:22,0:17:20.80:244,21,0	1/1:24,0:17:15.04:196,15,0	0/0:26,0:25:23.93:0,24,356	0/0:32,1:32:11.47:0,11,424	0/0:23,0:23:44.17:0,44,682	0/1:10,0:10:5.93:6,0,327	0/1:32,0:30:8.19:8,0,617	0/0:45,3:47:16.01:0,16,592	0/0:17,0:16:39.09:0,39,556	1/1:26,3:26:17.72:223,18,0	1/1:30,1:24:23.97:343,24,0	1/1:19,1:15:21.06:282,21,0	1/1:30,18:41:27.67:426,28,0	0/1:38,2:37:62.83:63,0,847	0/1:39,5:43:99:141,0,489	0/1:14,0:12:31.83:32,0,119
chr10	79692020	.	T	TCC	1162.52	PASS	AB=0.972;AC=20;AF=0.357;AN=56;BaseQRankSum=10.134;DP=845;FS=9.823;HRun=0;HaplotypeScore=318.8585;InbreedingCoeff=0.4355;MQ=50.24;MQ0=32;MQRankSum=-3.607;QD=2.78;ReadPosRankSum=-0.630;VQSLOD=0.9739;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:56.51:0,57,830	0/1:22,1:23:37:37,0,322	0/0:19,0:17:41.66:0,42,723	0/0:10,0:9:25.27:0,25,327	0/0:37,1:38:34.87:0,35,388	0/0:24,0:24:72.25:0,72,1172	0/0:20,0:20:51.07:0,51,739	0/0:65,0:58:52.41:0,52,1594	0/1:26,1:26:3.31:3,0,208	0/1:48,3:48:99:373,0,1008	0/1:31,1:30:0.13:0,0,638	1/1:31,0:27:11.78:109,12,0	0/1:23,0:18:1.68:70,0,2	1/1:23,0:17:11.51:71,12,0	0/0:26,0:25:36.95:0,37,441	0/0:32,2:33:21.95:0,22,506	0/0:23,0:23:33.97:0,34,744	0/1:10,0:10:26.82:27,0,372	0/0:32,0:30:45.87:0,46,813	0/0:49,2:50:15.27:0,15,687	0/0:17,0:16:39.10:0,39,634	1/1:30,0:27:11.17:72,11,0	1/1:30,0:24:23.42:143,23,0	1/1:20,0:15:17.62:108,18,0	1/1:49,0:42:24.87:174,25,0	0/0:41,0:37:8.04:0,8,1103	0/1:45,3:47:99:128,0,597	0/1:18,0:16:35.37:35,0,185
chr10	79692047	.	CTA	C	402.87	PASS	AB=0.883;AC=8;AF=0.143;AN=56;BaseQRankSum=6.559;DP=844;FS=0.000;HRun=0;HaplotypeScore=354.5046;InbreedingCoeff=-0.1901;MQ=37.66;MQ0=31;MQRankSum=-7.765;QD=1.39;ReadPosRankSum=-1.277;VQSLOD=1.2254;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:38.96:0,39,676	0/0:25,1:26:6.90:0,7,280	0/0:8,0:5:5.97:0,6,62	0/0:6,0:3:8.96:0,9,86	0/0:44,1:45:27.07:0,27,507	0/0:23,0:23:69.24:0,69,1212	0/0:21,0:20:41.49:0,41,789	0/1:77,1:64:99:217,0,1772	0/0:25,1:25:14.11:0,14,263	0/1:49,1:47:15.68:16,0,1518	0/0:36,0:33:32.87:0,33,504	0/1:23,6:26:53.28:53,0,102	0/1:14,10:21:90.53:91,0,162	0/0:13,2:14:9.03:0,9,129	0/0:24,2:25:14.08:0,14,408	0/1:32,1:32:15.27:15,0,415	0/0:24,0:24:51.17:0,51,830	0/1:9,1:10:42.56:43,0,331	0/0:24,0:22:26.52:0,27,661	0/0:61,0:60:19.93:0,20,620	0/0:9,0:8:12.01:0,12,190	0/0:24,8:30:8.38:0,8,68	0/0:21,9:26:11.73:0,12,171	0/0:12,1:10:8.72:0,9,126	0/1:35,13:43:12.66:13,0,251	0/0:51,1:48:99:0,102,1932	0/0:55,0:54:69.54:0,70,986	0/1:15,2:16:88.70:89,0,314
chr10	79692065	.	A	ATC	441.66	PASS	AB=0.971;AC=13;AF=0.232;AN=56;BaseQRankSum=5.426;DP=852;FS=8.260;HRun=0;HaplotypeScore=395.2911;InbreedingCoeff=-0.0368;MQ=39.56;MQ0=18;MQRankSum=-7.088;QD=1.17;ReadPosRankSum=0.574;VQSLOD=0.8230;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:27.05:0,27,352	0/0:26,2:28:6.88:0,7,107	0/0:10,0:7:18.06:0,18,247	0/0:13,0:10:16.61:0,17,220	0/0:51,2:53:30.05:0,30,408	0/0:29,0:29:87.23:0,87,1172	0/0:20,0:19:43.01:0,43,572	0/1:65,0:54:70.34:70,0,1010	0/1:25,2:26:2.46:2,0,226	0/1:49,2:49:99:160,0,839	0/0:34,3:34:20.60:0,21,216	0/0:34,0:32:17.93:0,18,149	0/0:30,0:28:10.27:0,10,278	0/1:20,0:19:0:0,0,0	0/1:26,0:25:4.70:5,0,161	0/0:32,1:32:29.80:0,30,304	0/0:25,0:25:59.68:0,60,783	0/1:10,0:10:25.76:26,0,162	0/1:20,2:19:99:109,0,217	0/0:53,6:58:24.11:0,24,292	0/0:7,0:6:9.02:0,9,94	0/0:32,0:32:3.71:0,4,34	0/1:27,0:25:0.21:0,0,0	1/1:8,0:8:3.01:42,3,0	0/0:42,0:42:4.15:0,4,40	0/1:49,1:46:13.10:13,0,1272	0/1:53,3:55:99:123,0,515	0/1:14,1:14:26.48:26,0,160
chr10	79692067	.	CTA	C	38.85	PASS	AB=0.891;AC=7;AF=0.125;AN=56;BaseQRankSum=5.025;DP=854;FS=3.903;HRun=0;HaplotypeScore=400.2826;InbreedingCoeff=0.3007;MQ=39.39;MQ0=17;MQRankSum=-2.224;QD=0.25;ReadPosRankSum=-0.178;VQSLOD=0.8764;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:26.89:0,27,457	0/0:27,0:27:17.25:0,17,188	0/0:10,0:7:18.06:0,18,257	0/1:13,0:10:1.13:1,0,223	0/0:52,1:53:30.02:0,30,541	0/0:29,0:29:87.28:0,87,1452	0/0:19,0:18:43.30:0,43,677	0/0:64,0:53:92.33:0,92,1273	0/0:27,0:26:16.61:0,17,305	0/0:52,0:50:62.31:0,62,1418	0/0:37,0:34:20.80:0,21,297	0/0:22,11:31:22.18:0,22,152	0/1:26,4:28:79.48:79,0,232	0/1:12,7:19:0:0,0,0	0/0:25,0:24:14.30:0,14,241	0/0:34,0:33:33.06:0,33,389	0/0:26,0:27:65.20:0,65,967	0/0:10,0:10:22.51:0,23,245	0/0:22,0:19:27.48:0,27,515	0/0:58,0:57:26.25:0,26,388	0/0:8,0:7:9.03:0,9,111	0/0:25,8:33:5.04:0,5,49	0/1:22,5:25:0.31:0,0,0	1/1:6,2:8:3.01:42,3,0	0/0:42,0:43:8.08:0,8,57	0/0:52,0:48:80.49:0,80,1777	0/1:56,0:55:17.76:18,0,662	0/0:14,0:14:16.77:0,17,259
chr10	79692076	.	A	ATC	174.28	PASS	AB=0.977;AC=13;AF=0.241;AN=54;BaseQRankSum=6.197;DP=819;FS=0.000;HRun=0;HaplotypeScore=399.7808;InbreedingCoeff=0.0013;MQ=41.59;MQ0=9;MQRankSum=-5.265;QD=0.50;ReadPosRankSum=-0.134;VQSLOD=0.7507;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:0.16:0,0,246	0/0:21,4:25:7.60:0,8,63	0/0:12,0:9:24.08:0,24,331	0/0:16,0:13:22.13:0,22,452	0/0:53,0:53:23.92:0,24,317	0/0:29,0:29:84.27:0,84,1186	0/0:19,0:18:36.84:0,37,520	0/0:35,0:32:73.58:0,74,988	0/0:27,0:26:15.48:0,15,278	0/0:40,0:39:23.88:0,24,742	0/0:34,1:33:14.01:0,14,153	1/1:34,0:33:8.06:55,8,0	0/1:29,0:28:59.35:59,0,77	0/0:19,0:19:2.97:0,3,20	0/1:25,2:26:0.95:1,0,158	0/0:32,0:31:21.14:0,21,213	0/0:31,0:31:74.46:0,74,973	0/1:8,0:8:13.27:13,0,21	0/1:19,2:20:54.08:54,0,180	0/1:50,5:54:56.74:57,0,75	0/1:8,0:7:15.84:16,0,37	0/0:33,0:33:3.88:0,4,25	0/1:29,0:27:0:0,0,0	./.	0/1:44,0:44:1.97:9,0,2	0/0:53,0:49:96.59:0,97,1415	0/1:57,1:57:33.30:33,0,631	0/1:15,0:15:12.92:13,0,179
chr10	79692093	.	T	TC	82.37	PASS	AB=0.986;AC=7;AF=0.125;AN=56;BaseQRankSum=-4.333;DP=558;FS=2.831;HRun=0;HaplotypeScore=296.8969;InbreedingCoeff=0.1757;MQ=50.79;MQ0=1;MQRankSum=5.268;QD=0.72;ReadPosRankSum=4.713;VQSLOD=1.4578;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:41.87:0,42,350	0/0:12,1:13:14.05:0,14,74	0/0:16,0:15:34.32:0,34,338	0/0:21,0:19:47.91:0,48,569	0/0:30,1:31:3.98:0,4,74	0/0:28,0:28:84.26:0,84,1141	0/0:16,0:16:45.14:0,45,608	0/1:25,0:24:60.81:61,0,81	0/1:12,1:13:2.39:2,0,16	0/1:18,0:18:0.20:57,0,0	0/0:23,0:23:16.07:0,16,91	0/0:23,0:23:59.01:0,59,486	0/0:29,0:29:68.35:0,68,531	0/0:16,0:16:36.02:0,36,332	0/1:12,0:12:3.91:4,0,23	0/0:15,1:16:1.14:0,1,27	0/0:27,0:27:75.21:0,75,1028	0/0:5,0:5:4.16:0,4,10	1/1:11,0:11:0.26:1,0,0	0/0:30,0:30:43.40:0,43,162	0/0:3,0:3:2.97:0,3,20	0/0:27,0:27:56.94:0,57,485	0/0:21,0:21:36.44:0,36,316	0/0:5,0:5:0.47:0,0,1	0/0:37,0:37:75.92:0,76,664	0/1:36,0:36:14.56:60,0,15	0/0:33,0:33:55.02:0,55,196	0/0:2,0:2:3.06:0,3,8
chr10	79692105	.	T	TC	221.35	PASS	AB=0.812;AC=10;AF=0.179;AN=56;BaseQRankSum=4.273;DP=572;FS=14.005;HRun=0;HaplotypeScore=286.0835;InbreedingCoeff=-0.1730;MQ=55.12;MQ0=2;MQRankSum=-6.799;QD=1.33;ReadPosRankSum=-5.927;VQSLOD=-0.2546;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:5,2:20:24.86:25,0,137	0/1:10,2:12:29.49:29,0,106	0/0:16,0:16:38.12:0,38,455	0/0:24,0:21:47.98:0,48,574	0/0:29,2:31:40.77:0,41,370	0/0:24,0:24:72.21:0,72,972	0/0:13,1:14:33.11:0,33,461	0/0:23,0:23:50.68:0,51,408	0/1:12,4:16:20.05:20,0,105	0/0:20,1:21:0.90:0,1,178	0/1:25,2:27:17.27:17,0,190	0/0:21,0:21:53.79:0,54,573	0/0:29,0:29:78.72:0,79,838	0/0:17,0:16:39.11:0,39,485	0/1:14,1:15:14.08:14,0,133	0/1:15,4:19:23.53:24,0,109	0/0:26,1:27:75.22:0,75,1029	0/1:5,3:8:28.68:40,0,29	0/1:6,2:8:58.19:70,0,58	0/0:32,1:33:11.13:0,11,249	0/1:4,2:5:5.39:42,0,5	0/0:24,0:24:60.03:0,60,693	0/0:20,0:20:43.73:0,44,538	0/0:6,0:6:1.82:0,2,5	0/0:33,0:33:61.77:0,62,751	0/0:39,0:39:81.98:0,82,477	0/1:31,3:33:82.21:82,0,252	0/0:4,0:4:8.07:0,8,25
chr10	79692109	.	CTATCTA	C	6923.60	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=0.327;DP=579;FS=1.902;HRun=0;HaplotypeScore=289.1781;InbreedingCoeff=0.9317;MQ=57.72;MQ0=2;MQRankSum=-6.070;QD=45.55;ReadPosRankSum=-0.307;VQSLOD=4.3860;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:22.82:0,23,538	0/0:12,0:12:14.80:0,15,371	0/0:20,0:19:36.54:0,37,893	0/0:22,0:20:35.72:0,36,874	0/0:31,0:31:32.15:0,32,1018	0/0:23,0:23:63.22:0,63,2077	0/0:12,0:12:33.10:0,33,973	0/0:22,0:22:51.09:0,51,1100	0/0:17,0:17:18.04:0,18,432	0/0:25,0:25:27.60:0,28,1501	0/0:27,0:27:44:0,44,1059	1/1:6,15:21:48.10:1003,48,0	1/1:5,24:29:69.24:1560,69,0	1/1:0,19:18:39.13:881,39,0	0/0:16,0:16:26.84:0,27,656	0/0:18,0:18:30.79:0,31,804	0/0:27,0:27:71.92:0,72,2404	0/0:9,0:9:14.99:0,15,405	0/0:8,0:8:15.05:0,15,333	0/0:38,0:38:72.15:0,72,1591	0/0:6,0:5:6.02:0,6,145	1/1:5,19:24:54.18:1173,54,0	1/1:3,18:21:45.15:983,45,0	1/1:0,7:7:3.01:34,3,0	1/1:9,22:31:60.20:1290,60,0	0/0:36,0:36:21.64:0,22,2049	0/0:33,0:32:52.60:0,53,1331	0/0:4,0:4:12.04:0,12,302
chr10	79692112	.	T	TCTAC	15095.68	PASS	AB=0.625;AC=31;AF=0.554;AN=56;BaseQRankSum=-4.192;DP=580;FS=2.667;HRun=0;HaplotypeScore=244.3577;InbreedingCoeff=0.8752;MQ=58.88;MQ0=2;MQRankSum=-7.379;QD=45.47;ReadPosRankSum=2.296;VQSLOD=5.3244;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:13.01:455,13,0	1/1:3,8:11:20.90:427,21,0	0/0:20,0:19:43.54:0,44,550	0/0:18,0:17:15.52:0,16,564	1/1:4,25:29:42.06:1081,42,0	0/0:24,0:24:69.19:0,69,1192	0/0:14,0:14:36.01:0,36,566	1/1:8,14:22:63.15:1354,63,0	1/1:5,13:19:17.92:481,18,0	1/1:2,22:24:57.45:1547,57,0	1/1:6,20:29:42.35:1101,42,0	0/0:20,0:20:15.18:0,15,340	0/0:28,0:28:72.04:0,72,670	0/0:19,0:18:27.11:0,27,329	1/1:3,11:14:27.09:723,27,0	1/1:7,11:18:33.11:870,33,0	0/0:27,0:27:75.24:0,75,1359	0/1:4,6:10:34.13:306,0,34	1/1:3,6:11:28.75:450,29,0	1/1:9,32:42:72.07:1675,72,0	1/1:2,4:6:6.02:145,6,0	0/0:24,0:24:52.47:0,52,464	0/0:19,0:19:42.87:0,43,389	0/0:7,0:7:2.94:0,3,18	0/0:27,0:27:45.88:0,46,482	1/1:2,35:37:99:2561,105,0	1/1:15,19:33:42.38:1596,42,0	1/1:0,4:4:12.04:322,12,0
chr10	79692539	.	A	ATTAGC	1016.63	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.499;DP=775;FS=5.461;HRun=0;HaplotypeScore=199.6713;InbreedingCoeff=0.9916;MQ=92.67;MQ0=0;MQRankSum=-5.473;QD=53.51;ReadPosRankSum=-0.976;VQSLOD=3.4380;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,12:19:39.13:1111,39,0	0/0:12,0:12:33.11:0,33,702	0/0:29,0:29:51.53:0,52,1429	0/0:37,0:37:90.31:0,90,1821	0/0:25,0:25:69.22:0,69,1412	0/0:37,0:37:99:0,102,2041	0/0:22,0:22:66.21:0,66,1367	0/0:30,0:30:84.29:0,84,1740	0/0:28,0:28:81.28:0,81,1724	0/0:36,0:36:99:0,105,2187	0/0:29,0:29:78.25:0,78,1616	0/0:24,0:24:69.21:0,69,1394	0/0:55,0:55:99:0,159,3238	0/0:37,0:37:99:0,111,2309	0/0:33,0:33:99:0,99,2090	0/0:32,0:32:90.27:0,90,1776	0/0:19,0:19:54.16:0,54,1104	0/0:14,0:14:42.14:0,42,895	0/0:31,0:31:81.26:0,81,1594	0/0:36,0:36:99:0,99,2048	0/0:20,0:20:57.20:0,57,1215	0/0:38,0:38:99:0,114,2429	0/0:31,0:31:84.29:0,84,1760	0/0:16,0:16:48.16:0,48,1023	0/0:23,0:23:60.21:0,60,1279	0/0:27,0:27:75.26:0,75,1557	0/0:26,0:26:78.25:0,78,1595	0/0:9,0:9:18.02:0,18,340
chr10	79692898	.	G	GC	7077.77	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.300;DP=741;FS=7.800;HRun=0;HaplotypeScore=82.6711;InbreedingCoeff=0.9968;MQ=81.46;MQ0=0;MQRankSum=-6.308;QD=43.96;ReadPosRankSum=4.044;VQSLOD=4.9589;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.22:0,66,922	0/0:16,0:16:48.16:0,48,670	0/0:26,0:25:72.19:0,72,973	0/0:27,0:27:61.22:0,61,780	0/0:34,0:34:99:0,102,1423	0/0:32,0:32:96.32:0,96,1340	0/0:20,0:20:57.17:0,57,779	0/0:40,0:40:99:0,120,1662	0/0:26,0:26:78.26:0,78,1090	0/0:28,0:28:81.26:0,81,1118	0/0:24,0:24:72.23:0,72,988	1/1:0,24:24:66.23:1055,66,0	1/1:1,17:18:45.15:719,45,0	1/1:0,35:35:96.33:1534,96,0	0/0:40,0:40:99:0,120,1659	0/0:25,0:25:72.23:0,72,988	0/0:32,0:32:96.29:0,96,1321	0/0:20,0:20:57.19:0,57,797	0/0:19,0:19:54.16:0,54,722	0/0:37,0:37:99:0,111,1517	0/0:26,0:26:78.26:0,78,1087	1/1:0,28:28:72.25:1150,72,0	1/1:0,35:36:99:1660,105,0	1/1:0,20:20:60.20:959,60,0	0/0:29,0:29:84.25:0,84,1139	0/0:27,0:27:78.26:0,78,1083	0/0:23,0:23:66.22:0,66,918	0/0:5,0:5:15.05:0,15,210
chr10	79693421	.	TTCTA	T	1612.25	PASS	AB=0.917;AC=21;AF=0.420;AN=50;BaseQRankSum=3.617;DP=422;FS=5.223;HRun=0;HaplotypeScore=93.1047;InbreedingCoeff=0.6813;MQ=64.39;MQ0=4;MQRankSum=1.449;QD=10.75;ReadPosRankSum=-0.966;VQSLOD=2.2322;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:24:18.03:0,18,290	1/1:1,3:4:9.03:137,9,0	./.	./.	1/1:5,5:10:8.99:111,9,0	0/0:11,0:11:24.07:0,24,514	0/0:10,0:9:15.05:0,15,347	./.	0/0:13,0:13:18.06:0,18,387	1/1:10,2:13:9.02:120,9,0	1/1:6,14:19:33.07:478,33,0	0/0:9,0:9:0:0,0,3	0/1:15,0:15:0.52:1,0,1	0/1:19,0:19:1.44:11,0,1	1/1:7,11:18:27.09:412,27,0	0/0:12,0:12:15.04:0,15,270	0/0:16,0:24:18.06:0,18,303	0/1:10,5:15:4.94:168,0,5	0/0:24,0:26:21.07:0,21,323	0/0:16,0:16:24.08:0,24,524	0/0:14,0:14:27.09:0,27,566	0/0:11,0:11:2.06:0,2,7	1/1:10,0:10:1.36:4,1,0	1/1:8,0:8:4.36:21,4,0	0/0:1,0:13:12.04:0,12,172	1/1:4,6:10:18.06:275,18,0	0/0:25,0:25:30.09:0,30,612	1/1:6,2:7:3.01:46,3,0
chr10	79693424	.	TA	T	1447.34	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=9.991;DP=406;FS=0.603;HRun=1;HaplotypeScore=69.9178;InbreedingCoeff=0.8268;MQ=62.66;MQ0=5;MQRankSum=-0.830;QD=19.04;ReadPosRankSum=1.374;VQSLOD=3.8775;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:42.10:0,42,552	0/0:4,0:4:6.75:0,7,55	0/0:9,0:5:15.05:0,15,225	0/0:11,0:10:27.09:0,27,401	0/0:9,0:9:0.60:0,1,213	0/0:12,0:12:33.10:0,33,499	0/0:11,0:10:27.07:0,27,399	0/0:39,0:38:99:0,114,1617	0/0:14,0:14:39.13:0,39,604	0/0:14,0:13:34.14:0,34,443	0/0:20,0:19:39.55:0,40,423	1/1:0,8:8:21.07:287,21,0	1/1:0,11:12:18.02:213,18,0	1/1:0,17:17:39.09:503,39,0	0/0:18,0:18:32.28:0,32,346	0/0:11,0:11:33.11:0,33,512	0/0:23,0:22:45.11:0,45,620	0/0:13,0:13:26:0,26,305	0/0:25,0:25:73.12:0,73,1062	0/0:17,0:17:48.16:0,48,747	0/0:15,0:15:45.15:0,45,702	1/1:1,7:8:15.01:180,15,0	1/1:0,10:10:12.04:168,12,0	1/1:1,7:8:21.03:265,21,0	0/1:13,0:13:12.79:17,0,13	0/0:9,0:9:14.94:0,15,152	0/0:24,0:24:69.21:0,69,1047	0/0:8,0:7:16.28:0,16,210
chr10	79693571	.	G	GAT	576.48	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=6.565;DP=230;FS=51.360;HRun=0;HaplotypeScore=32.2034;InbreedingCoeff=0.8156;MQ=66.91;MQ0=0;MQRankSum=-4.268;QD=25.06;ReadPosRankSum=-2.104;VQSLOD=1.5699;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:24.07:0,24,335	0/0:4,0:4:12.04:0,12,183	0/0:4,0:3:8.76:0,9,103	0/0:5,0:3:2.49:0,2,44	0/0:8,0:8:21.06:0,21,301	0/0:22,0:21:63.18:0,63,917	0/0:1,0:1:3.01:0,3,46	0/0:37,0:37:99:0,108,1609	0/0:2,0:2:6.02:0,6,90	0/0:11,0:11:33.11:0,33,503	0/0:6,0:5:18.06:0,18,276	./.	1/1:6,2:8:21.51:244,22,0	1/1:3,1:4:9.02:97,9,0	0/0:7,0:7:21.07:0,21,322	0/0:8,0:8:24.08:0,24,365	0/0:12,0:12:36.09:0,36,521	0/0:11,0:11:33.11:0,33,505	0/0:12,0:12:36.12:0,36,549	0/0:9,0:9:21.04:0,21,280	0/0:5,0:5:15.05:0,15,230	1/1:4,1:5:15.05:188,15,0	1/1:6,0:6:18.04:196,18,0	./.	0/0:9,0:9:24.03:0,24,282	0/0:4,0:4:12.04:0,12,181	0/0:11,0:11:30.10:0,30,459	0/0:11,0:11:27.09:0,27,413
chr10	79693581	.	A	ATG	255.61	PASS	AB=0.933;AC=9;AF=0.173;AN=52;BaseQRankSum=5.530;DP=218;FS=7.261;HRun=0;HaplotypeScore=32.7939;InbreedingCoeff=0.4416;MQ=68.25;MQ0=0;MQRankSum=-3.660;QD=5.81;ReadPosRankSum=-0.786;VQSLOD=0.8639;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:18.06:0,18,275	0/0:4,0:4:12.04:0,12,183	0/0:3,0:1:3.01:0,3,46	0/1:10,0:7:6.85:7,0,22	0/0:7,0:7:21.06:0,21,298	0/0:23,0:22:69.17:0,69,967	0/0:1,0:1:3.01:0,3,46	0/0:37,0:37:99:0,111,1546	0/0:2,0:2:6.02:0,6,92	0/0:8,0:8:24.08:0,24,350	0/0:5,0:5:15.04:0,15,208	./.	1/1:9,2:11:12.02:165,12,0	0/1:3,1:4:17.20:36,0,17	0/0:6,0:6:18.05:0,18,254	0/0:7,0:7:18.03:0,18,232	0/0:11,0:11:33.08:0,33,480	0/0:10,0:10:27.09:0,27,412	0/0:9,0:9:24.08:0,24,367	0/0:5,0:5:15.05:0,15,229	0/0:4,0:4:12.02:0,12,159	1/1:4,1:5:9.02:102,9,0	1/1:6,0:6:6.01:73,6,0	./.	0/1:8,0:8:10.94:11,0,82	0/0:2,0:2:6.02:0,6,92	0/0:10,0:10:30.07:0,30,414	0/0:11,0:11:33.09:0,33,481
chr10	79693586	.	TTA	T	45.94	PASS	AB=0.742;AC=3;AF=0.056;AN=54;BaseQRankSum=4.626;DP=221;FS=5.061;HRun=0;HaplotypeScore=31.9672;InbreedingCoeff=-0.0676;MQ=70.34;MQ0=0;MQRankSum=-3.734;QD=3.53;ReadPosRankSum=-1.469;VQSLOD=1.0250;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:21.07:0,21,404	0/0:5,0:5:15.05:0,15,283	0/0:3,0:1:3.01:0,3,61	0/0:10,1:8:0.20:0,0,98	0/0:8,0:8:24.07:0,24,428	0/0:22,0:21:66.22:0,66,1297	0/0:1,0:1:3.01:0,3,61	0/0:40,0:40:99:0,120,2291	0/0:3,0:3:9.03:0,9,151	0/0:8,0:8:24.08:0,24,438	0/0:6,0:6:18.06:0,18,348	0/0:4,0:4:12.04:0,12,142	0/0:9,0:9:13.73:0,14,298	0/0:4,0:4:8.39:0,8,80	0/0:6,0:6:18.06:0,18,356	0/0:7,0:7:18.06:0,18,336	0/0:11,0:11:33.11:0,33,659	0/0:10,0:10:30.10:0,30,589	0/0:11,0:11:33.11:0,33,632	0/0:6,0:6:18.06:0,18,356	0/0:4,0:4:12.02:0,12,196	0/1:2,1:3:27.57:28,0,44	0/1:1,2:3:10.98:36,0,11	./.	0/1:6,1:7:80.04:80,0,145	0/0:2,0:2:6.02:0,6,101	0/0:10,0:10:30.10:0,30,563	0/0:10,0:10:30.10:0,30,574
chr10	79693705	.	C	CCT	2599.90	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.008;DP=431;FS=21.900;HRun=0;HaplotypeScore=61.0911;InbreedingCoeff=0.9811;MQ=89.02;MQ0=0;MQRankSum=-6.651;QD=39.39;ReadPosRankSum=1.514;VQSLOD=3.1446;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.16:0,48,781	0/0:4,0:4:12.04:0,12,192	0/0:22,0:22:63.16:0,63,974	0/0:12,0:12:29.23:0,29,480	0/0:20,0:20:60.18:0,60,948	0/0:20,0:19:60.16:0,60,905	0/0:8,0:8:24.05:0,24,336	0/0:51,0:51:99:0,147,2280	0/0:10,0:10:30.09:0,30,464	0/0:22,0:22:66.20:0,66,1000	0/0:13,0:13:33.11:0,33,538	1/1:1,8:9:18.06:363,18,0	1/1:0,5:5:15.05:302,15,0	1/1:1,15:16:30.06:544,30,0	0/0:19,0:19:54.18:0,54,873	0/0:12,0:12:36.12:0,36,584	0/0:20,0:20:60.17:0,60,927	0/0:12,0:12:33.09:0,33,511	0/0:8,0:8:24.07:0,24,349	0/0:18,0:18:51.17:0,51,826	0/0:16,0:16:45.15:0,45,733	1/1:1,12:13:30.10:606,30,0	1/1:3,15:18:36.12:728,36,0	1/1:1,4:5:12.04:242,12,0	0/0:19,0:19:57.18:0,57,905	0/0:16,0:16:48.16:0,48,757	0/0:16,0:15:48.16:0,48,765	0/0:10,0:10:30.10:0,30,489
chr10	79693774	.	C	CG	1384.67	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.651;DP=542;FS=9.735;HRun=0;HaplotypeScore=101.6853;InbreedingCoeff=0.9882;MQ=85.96;MQ0=0;MQRankSum=-13.233;QD=14.58;ReadPosRankSum=4.643;VQSLOD=5.2253;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.31:0,96,1324	0/0:7,0:7:21.07:0,21,293	0/0:20,0:20:57.18:0,57,783	0/0:19,0:19:28.11:0,28,677	0/0:17,0:17:51.17:0,51,713	0/0:31,0:31:93.28:0,93,1266	0/0:19,0:19:57.17:0,57,777	0/0:48,0:48:99:0,144,1957	0/0:12,0:12:36.11:0,36,486	0/0:17,0:17:48.15:0,48,655	0/0:21,0:21:63.17:0,63,831	1/1:1,15:16:35.38:305,35,0	1/1:2,15:17:14.04:234,14,0	1/1:3,16:19:35.37:296,35,0	0/0:31,0:31:93.30:0,93,1282	0/0:22,0:22:66.21:0,66,905	0/0:18,0:18:54.18:0,54,755	0/0:13,0:13:39.13:0,39,545	0/0:13,0:13:39.13:0,39,542	0/0:22,0:22:60.19:0,60,822	0/0:14,0:14:42.14:0,42,586	1/1:2,17:19:47.69:351,48,0	1/1:0,16:16:41.64:298,42,0	1/1:1,7:8:11.91:85,12,0	0/0:22,0:22:66.22:0,66,922	0/0:17,0:17:51.17:0,51,713	0/0:22,0:22:63.20:0,63,864	0/0:9,0:9:27.09:0,27,377
chr10	79693776	.	C	CAT	2478.36	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.090;DP=548;FS=6.231;HRun=0;HaplotypeScore=109.7976;InbreedingCoeff=0.9947;MQ=88.27;MQ0=0;MQRankSum=-14.048;QD=26.09;ReadPosRankSum=4.116;VQSLOD=4.5155;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1521	0/0:6,0:6:18.06:0,18,293	0/0:21,0:21:60.19:0,60,932	0/0:22,0:22:62.91:0,63,911	0/0:18,0:18:51.17:0,51,831	0/0:31,0:31:93.27:0,93,1432	0/0:17,0:17:51.17:0,51,828	0/0:49,0:49:99:0,144,2210	0/0:12,0:12:36.11:0,36,562	0/0:18,0:18:51.16:0,51,787	0/0:22,0:22:60.16:0,60,901	1/1:1,15:16:44.62:505,45,0	1/1:2,15:17:29.18:408,29,0	1/1:3,16:19:53.41:559,53,0	0/0:31,0:31:93.27:0,93,1438	0/0:22,0:22:66.20:0,66,1025	0/0:20,0:20:54.18:0,54,880	0/0:13,0:13:39.13:0,39,635	0/0:13,0:13:39.13:0,39,635	0/0:21,0:21:63.18:0,63,978	0/0:13,0:13:39.13:0,39,627	1/1:2,17:19:48.14:557,48,0	1/1:0,16:16:42.12:478,42,0	1/1:1,7:8:15.01:159,15,0	0/0:22,0:22:66.20:0,66,1049	0/0:17,0:17:51.16:0,51,788	0/0:23,0:23:66.19:0,66,1013	0/0:9,0:9:27.09:0,27,439
chr10	79694211	.	CAGAA	C	4948.12	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.633;DP=552;FS=11.654;HRun=0;HaplotypeScore=94.0284;InbreedingCoeff=0.9910;MQ=81.39;MQ0=0;MQRankSum=-2.800;QD=53.78;ReadPosRankSum=3.245;VQSLOD=5.7901;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.20:0,66,1824	0/0:14,0:14:42.14:0,42,1201	0/0:16,0:16:45.15:0,45,1223	0/0:18,0:18:44.30:0,44,1236	0/0:25,0:25:75.26:0,75,2131	0/0:24,0:24:69.24:0,69,1999	0/0:12,0:12:36.12:0,36,995	0/0:35,0:35:99:0,105,2953	0/0:19,0:19:57.20:0,57,1652	0/0:27,0:27:81.27:0,81,2220	0/0:18,0:18:54.17:0,54,1466	1/1:0,20:20:60.21:1245,60,0	1/1:0,20:20:57.20:1192,57,0	1/1:0,20:20:51.18:1067,51,0	0/0:21,0:21:63.20:0,63,1745	0/0:28,0:28:84.29:0,84,2403	0/0:21,0:21:63.22:0,63,1820	0/0:10,0:10:27.05:0,27,657	0/0:24,0:24:72.25:0,72,2087	0/0:25,0:25:75.20:0,75,2017	0/0:14,0:14:42.14:0,42,1202	1/1:0,8:8:21.07:438,21,0	1/1:0,9:9:18.06:377,18,0	1/1:0,15:15:30.10:629,30,0	0/0:32,0:32:96.33:0,96,2744	0/0:21,0:21:60.17:0,60,1503	0/0:29,0:29:87.30:0,87,2504	0/0:4,0:4:12.04:0,12,346
chr10	79695731	.	G	GATA	1006.38	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=7.764;DP=315;FS=4.055;HRun=0;HaplotypeScore=52.1041;InbreedingCoeff=0.8478;MQ=61.76;MQ0=0;MQRankSum=-5.502;QD=20.54;ReadPosRankSum=-0.298;VQSLOD=2.8956;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:33.11:0,33,476	0/0:6,0:6:18.06:0,18,262	./.	0/0:8,0:4:2.60:0,3,10	0/0:14,0:14:24.07:0,24,330	0/0:14,0:14:33.11:0,33,479	0/0:6,0:6:15.05:0,15,216	0/0:42,0:41:78.25:0,78,1095	0/0:10,0:10:15.03:0,15,199	0/0:13,0:13:15.05:0,15,215	0/0:9,0:9:12.04:0,12,173	1/1:6,3:9:12.03:189,12,0	1/1:6,8:14:24.08:425,24,0	1/1:8,5:13:24.07:391,24,0	0/0:13,0:13:24.07:0,24,326	0/0:9,0:9:18.06:0,18,262	0/0:30,0:30:87.24:0,87,1224	0/0:8,0:8:18.03:0,18,239	0/0:16,0:16:45.12:0,45,617	0/0:11,0:11:21.04:0,21,266	./.	1/1:3,0:3:2.92:17,3,0	1/1:3,1:4:5.98:77,6,0	1/1:5,1:6:5.93:70,6,0	0/0:9,0:9:21.04:0,21,266	0/0:8,0:8:21.07:0,21,305	0/0:16,0:16:39.06:0,39,524	0/0:7,0:7:15.05:0,15,218
chr10	79695755	.	GATAAT	G	1365.40	PASS	AB=0.667;AC=11;AF=0.212;AN=52;BaseQRankSum=8.277;DP=283;FS=2.632;HRun=0;HaplotypeScore=57.5006;InbreedingCoeff=0.8669;MQ=57.95;MQ0=0;MQRankSum=-7.466;QD=37.93;ReadPosRankSum=1.240;VQSLOD=3.5150;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:30.10:0,30,913	0/0:6,0:6:12.04:0,12,235	./.	./.	0/0:10,0:10:30.10:0,30,693	0/0:13,0:13:39.13:0,39,1133	0/0:4,0:4:12.04:0,12,366	0/0:44,0:43:99:0,123,3265	0/0:8,0:8:24.08:0,24,587	0/0:9,0:9:27.09:0,27,772	0/0:10,0:10:30.10:0,30,765	1/1:2,4:6:18.06:326,18,0	1/1:1,10:11:30.10:543,30,0	1/1:2,7:9:24.07:421,24,0	0/0:9,0:9:27.08:0,27,712	0/0:7,0:7:21.07:0,21,595	0/0:35,0:35:99:0,102,2827	0/0:6,0:6:18.06:0,18,418	0/0:17,0:17:45.15:0,45,1308	0/0:7,0:7:15.05:0,15,430	0/0:2,0:2:6.02:0,6,167	1/1:0,2:2:6.02:123,6,0	1/1:0,4:4:6.02:110,6,0	0/1:2,2:4:0:0,0,0	0/0:12,0:12:36.12:0,36,995	0/0:9,0:9:24.08:0,24,731	0/0:14,0:14:39.13:0,39,1051	0/0:8,0:8:24.08:0,24,646
chr10	79696005	.	C	CATGTGT	7500.41	PASS	AB=0.696;AC=43;AF=0.768;AN=56;BaseQRankSum=1.568;DP=511;FS=7.624;HRun=0;HaplotypeScore=143.7233;InbreedingCoeff=0.6603;MQ=53.75;MQ0=11;MQRankSum=-2.862;QD=18.47;ReadPosRankSum=-2.761;VQSLOD=3.5522;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:24:35.64:328,36,0	1/1:1,1:8:9.03:271,9,0	0/0:18,0:10:19.44:0,19,180	0/0:16,0:7:20.91:0,21,182	1/1:22,0:21:36.45:405,36,0	0/0:26,0:28:52.92:0,53,1097	0/0:27,0:26:71.91:0,72,1078	1/1:22,0:22:66.08:1112,66,0	1/1:3,12:22:14.88:407,15,0	1/1:5,0:19:47.91:664,48,0	0/1:3,0:16:0:0,0,0	1/1:3,0:19:10.98:52,11,0	0/1:3,0:21:12.75:90,0,13	1/1:1,0:16:11.36:55,11,0	1/1:10,1:32:20.80:576,21,0	1/1:10,3:25:21.14:579,21,0	0/0:12,0:16:2.90:0,3,604	1/1:6,1:12:14.80:202,15,0	1/1:2,0:14:41.73:446,42,0	1/1:3,7:13:5.95:194,6,0	1/1:15,0:15:24.01:293,24,0	1/1:3,0:15:16.91:80,17,0	1/1:0,0:17:19.42:90,19,0	1/1:3,0:12:7.94:33,8,0	0/1:17,0:18:58.31:58,0,269	1/1:4,1:16:44.85:725,45,0	1/1:12,3:18:43.61:702,44,0	1/1:3,0:3:8.99:137,9,0
chr10	79696158	.	G	GTTGGTC	8379.49	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-1.173;DP=468;FS=3.446;HRun=0;HaplotypeScore=99.1230;InbreedingCoeff=0.9845;MQ=77.00;MQ0=0;MQRankSum=-12.907;QD=97.44;ReadPosRankSum=1.071;VQSLOD=7.1919;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.25:0,78,1792	0/0:6,0:6:18.06:0,18,433	0/0:21,0:21:57.16:0,57,1184	0/0:15,0:15:40.69:0,41,803	0/0:14,0:14:39.12:0,39,890	0/0:24,0:24:66.21:0,66,1539	0/0:21,0:21:60.19:0,60,1390	0/0:20,0:20:57.18:0,57,1280	0/0:18,0:18:45.15:0,45,1076	0/0:12,0:12:36.12:0,36,865	0/0:13,0:13:39.13:0,39,894	1/1:6,16:22:63.22:2242,63,0	1/1:2,10:12:33.11:1128,33,0	1/1:2,13:16:48.15:1598,48,0	0/0:27,0:26:78.27:0,78,1845	0/0:21,0:21:54.19:0,54,1293	0/0:15,0:15:42.14:0,42,1010	0/0:3,0:3:9.03:0,9,216	0/0:19,0:19:48.15:0,48,1094	0/0:15,0:15:42.14:0,42,989	0/0:18,0:18:51.18:0,51,1225	1/1:2,10:12:36.12:1289,36,0	1/1:4,11:15:45.15:1482,45,0	1/1:3,6:9:18.06:641,18,0	0/0:13,0:13:36.12:0,36,866	0/0:22,0:22:60.21:0,60,1441	0/0:27,0:27:75.26:0,75,1751	0/0:9,0:9:24.08:0,24,577
chr10	79696226	.	TC	T	2064.57	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.281;DP=446;FS=4.562;HRun=9;HaplotypeScore=62.4449;InbreedingCoeff=0.9274;MQ=86.50;MQ0=0;MQRankSum=-1.158;QD=20.04;ReadPosRankSum=2.906;VQSLOD=4.3526;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:68.11:0,68,451	0/0:2,0:2:6.02:0,6,69	0/0:13,0:13:5.32:0,5,268	0/0:21,0:21:32.87:0,33,330	0/0:19,0:19:51.15:0,51,588	0/0:27,0:27:69.19:0,69,787	0/0:16,0:16:39.12:0,39,450	0/0:31,0:31:69.16:0,69,766	0/0:13,0:13:35.94:0,36,395	0/0:6,0:6:12.04:0,12,139	0/0:14,0:14:33.10:0,33,380	1/1:7,13:20:39:357,39,0	1/1:2,11:13:33.02:302,33,0	1/1:1,21:22:63.03:576,63,0	0/0:20,0:20:48.14:0,48,554	0/0:14,0:14:27.08:0,27,312	0/0:13,0:13:36.11:0,36,414	0/0:2,0:2:6.02:0,6,69	0/0:14,1:15:17.66:0,18,457	0/0:13,0:13:30.09:0,30,346	0/0:17,0:17:45.13:0,45,519	1/1:2,15:17:39.02:357,39,0	1/1:4,15:19:45.02:412,45,0	1/1:2,10:12:27.01:247,27,0	0/0:3,0:12:28.74:0,29,185	0/0:13,0:14:35.29:0,35,373	0/0:21,0:21:51.14:0,51,578	0/0:11,0:11:30.98:0,31,348
chr10	79697483	.	T	TCCCCC	5301.27	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.831;DP=481;FS=19.465;HRun=0;HaplotypeScore=145.9208;InbreedingCoeff=0.9776;MQ=78.21;MQ0=2;MQRankSum=-10.089;QD=51.47;ReadPosRankSum=5.928;VQSLOD=3.4825;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:33.57:0,34,654	0/0:5,0:5:12.03:0,12,218	0/0:34,0:24:60.09:0,60,997	0/0:24,0:23:20.82:0,21,686	0/0:13,0:13:38.92:0,39,715	0/0:28,0:27:81.21:0,81,1584	0/0:20,0:20:57.18:0,57,1246	0/0:21,0:21:54.13:0,54,1079	0/0:14,0:14:42.09:0,42,750	0/0:9,0:9:27.09:0,27,591	0/0:5,0:5:12.03:0,12,213	1/1:26,1:27:81.27:1512,81,0	1/1:19,2:21:40.92:982,41,0	1/1:22,0:22:66.22:1122,66,0	0/0:23,0:23:63.15:0,63,1266	0/0:10,0:10:27.09:0,27,619	0/0:29,0:29:78.23:0,78,1574	0/0:9,0:9:18.03:0,18,303	0/0:13,0:12:36.11:0,36,691	0/0:15,0:15:41.99:0,42,717	0/0:15,0:15:33.10:0,33,711	1/1:6,4:10:24.08:498,24,0	1/1:14,1:15:39.13:756,39,0	1/1:8,0:8:24.08:432,24,0	0/0:19,0:19:42.13:0,42,912	0/0:28,0:28:78.26:0,78,1704	0/0:20,0:20:60.09:0,60,1232	0/0:6,0:6:12.04:0,12,221
chr10	79697865	.	C	CAGGCCAGTCTA	19937.39	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-7.177;DP=771;FS=2.061;HRun=0;HaplotypeScore=237.4729;InbreedingCoeff=0.9979;MQ=86.57;MQ0=0;MQRankSum=-17.089;QD=118.67;ReadPosRankSum=2.145;VQSLOD=5.1314;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,117,3914	0/0:7,0:7:21.07:0,21,762	0/0:33,0:33:81.23:0,81,2630	0/0:30,0:30:76.42:0,76,2124	0/0:19,0:19:50.98:0,51,1682	0/0:25,0:25:69.24:0,69,2358	0/0:25,0:25:69.21:0,69,2270	0/0:25,0:25:69.22:0,69,2339	0/0:27,0:27:81.26:0,81,2783	0/0:28,0:28:84.29:0,84,2908	0/0:16,0:16:45.13:0,45,1536	1/1:13,15:31:78.27:4056,78,0	1/1:12,23:39:52.53:5043,53,0	1/1:9,20:32:90.31:4898,90,0	0/0:42,0:42:99:0,126,4426	0/0:33,0:33:96.33:0,96,3451	0/0:26,0:26:75.26:0,75,2568	0/0:20,0:20:54.19:0,54,1959	0/0:30,0:30:87.26:0,87,2891	0/0:21,0:21:60.21:0,60,2105	0/0:57,0:57:99:0,163,5544	1/1:9,7:18:36.12:1964,36,0	1/1:6,15:25:48.16:2716,48,0	1/1:9,7:23:24.08:1261,24,0	0/0:31,0:31:93.30:0,93,3287	0/0:26,0:26:75.26:0,75,2697	0/0:32,0:32:96.33:0,96,3187	0/0:7,0:7:21.07:0,21,761
chr10	79698052	.	CA	C	3514.51	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.975;DP=684;FS=1.217;HRun=7;HaplotypeScore=74.3897;InbreedingCoeff=0.9999;MQ=70.92;MQ0=0;MQRankSum=-1.263;QD=25.84;ReadPosRankSum=3.193;VQSLOD=4.3958;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.17:0,54,679	0/0:13,0:13:39.12:0,39,490	0/0:15,0:15:33.07:0,33,376	0/0:16,0:16:39.06:0,39,469	0/0:32,0:32:87.27:0,87,1080	0/0:19,0:19:54.17:0,54,679	0/0:15,0:15:36.12:0,36,453	0/0:48,0:48:99:0,117,1454	0/0:24,0:24:69.22:0,69,868	0/0:36,0:36:99:0,105,1302	0/0:24,0:24:66.21:0,66,823	1/1:1,18:19:48.11:490,48,0	1/1:1,21:22:57.13:581,57,0	1/1:3,19:22:57.13:581,57,0	0/0:33,0:33:96.31:0,96,1207	0/0:31,0:31:75.19:0,75,913	0/0:18,0:18:48.14:0,48,590	0/0:24,0:24:66.17:0,66,812	0/0:16,0:16:45.14:0,45,566	0/0:26,0:26:72.23:0,72,905	0/0:17,0:17:45.13:0,45,553	1/1:3,29:32:81.18:823,81,0	1/1:2,18:20:51.12:520,51,0	1/1:2,19:21:51.11:520,51,0	0/0:35,0:35:93.27:0,93,1145	0/0:37,0:37:99:0,105,1319	0/0:31,0:31:87.27:0,87,1082	0/0:19,0:19:51.16:0,51,642
chr10	79698160	.	CATCTT	C	18672.35	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-3.876;DP=624;FS=0.965;HRun=0;HaplotypeScore=160.6614;InbreedingCoeff=0.9991;MQ=80.24;MQ0=0;MQRankSum=-8.434;QD=55.57;ReadPosRankSum=1.906;VQSLOD=5.4680;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.25:0,78,2344	1/1:0,11:11:33.11:715,33,0	0/0:18,0:18:50.18:0,50,1189	0/0:19,0:19:50.66:0,51,1389	1/1:2,32:34:93.23:1926,93,0	0/0:26,0:26:78.24:0,78,2334	0/0:14,0:14:35.65:0,36,1073	1/1:1,29:30:87.24:1726,87,0	1/1:1,21:22:45.15:962,45,0	1/1:0,21:21:63.22:1367,63,0	1/1:1,18:19:45.07:916,45,0	0/0:22,0:22:63.19:0,63,1847	0/0:23,0:23:69.24:0,69,2152	0/0:23,0:23:66.23:0,66,2072	1/1:3,23:26:63.22:1367,63,0	1/1:0,23:23:63.22:1367,63,0	0/0:17,0:17:51.18:0,51,1615	1/1:0,18:18:39.13:836,39,0	1/1:0,15:15:45.15:959,45,0	1/1:1,36:37:99:2274,108,0	1/1:0,10:10:21.07:456,21,0	0/0:23,0:23:57.18:0,57,1673	0/0:39,0:39:99:0,108,3085	0/0:18,0:18:51.18:0,51,1594	0/0:19,0:19:57.16:0,57,1622	1/1:0,28:28:84.24:1665,84,0	1/1:1,32:33:75.26:1616,75,0	1/1:0,9:9:24.08:521,24,0
chr10	79700824	.	A	ATG	6939.78	PASS	AB=0.583;AC=15;AF=0.268;AN=56;BaseQRankSum=1.822;DP=492;FS=0.000;HRun=0;HaplotypeScore=78.2663;InbreedingCoeff=0.8961;MQ=79.02;MQ0=0;MQRankSum=-4.036;QD=50.29;ReadPosRankSum=2.294;VQSLOD=5.8655;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,20:28:37.57:983,0,38	0/0:4,0:4:9.03:0,9,147	0/0:18,0:18:47.55:0,48,648	0/0:7,0:7:15.03:0,15,224	0/0:21,0:21:63.22:0,63,1028	0/0:17,0:17:51.17:0,51,832	0/0:22,0:22:66.23:0,66,1073	0/0:27,0:27:81.28:0,81,1320	0/0:14,0:14:36.12:0,36,587	0/0:26,0:26:75.26:0,75,1218	0/0:23,0:23:63.22:0,63,1027	1/1:0,17:17:48.16:974,48,0	1/1:0,16:16:48.16:973,48,0	1/1:0,11:12:30.10:608,30,0	0/0:25,0:25:66.23:0,66,1077	0/0:18,0:18:39.13:0,39,636	0/0:19,0:19:54.18:0,54,881	0/0:23,0:23:63.15:0,63,972	0/0:14,0:14:42.14:0,42,685	0/0:13,0:13:39.13:0,39,636	0/0:19,0:19:54.18:0,54,877	1/1:1,17:18:45.15:913,45,0	1/1:0,20:21:51.18:1028,51,0	1/1:0,9:9:27.09:548,27,0	1/1:2,15:17:45.15:913,45,0	0/0:22,0:22:66.23:0,66,1077	0/0:13,0:13:33.11:0,33,538	0/0:9,0:9:27.09:0,27,441
chr10	79701834	.	GAACA	G	6649.98	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.152;DP=673;FS=3.889;HRun=0;HaplotypeScore=117.9286;InbreedingCoeff=0.9995;MQ=76.34;MQ0=0;MQRankSum=-1.368;QD=54.06;ReadPosRankSum=4.659;VQSLOD=6.3170;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.23:0,66,1793	0/0:14,0:14:42.14:0,42,1142	0/0:16,0:16:28.18:0,28,1071	0/0:13,0:13:39:0,39,920	0/0:47,0:47:99:0,141,3822	0/0:29,0:29:84.29:0,84,2351	0/0:20,0:20:57.20:0,57,1585	0/0:28,0:28:81.28:0,81,2266	0/0:28,0:28:84.29:0,84,2327	0/0:40,0:40:99:0,120,3276	0/0:33,0:33:96.32:0,96,2570	1/1:0,19:19:54.19:1078,54,0	1/1:0,21:21:60.21:1198,60,0	1/1:0,22:22:57.20:1138,57,0	0/0:25,0:25:75.26:0,75,2049	0/0:25,0:24:72.24:0,72,1947	0/0:14,0:14:42.14:0,42,1167	0/0:26,0:26:78.19:0,78,1879	0/0:21,0:21:63.22:0,63,1699	0/0:36,0:36:99:0,108,2929	0/0:14,0:14:42.14:0,42,1140	1/1:0,26:26:66.23:1318,66,0	1/1:0,23:23:66.23:1318,66,0	1/1:0,12:12:30.10:599,30,0	0/0:28,0:28:84.29:0,84,2314	0/0:26,0:26:78.27:0,78,2178	0/0:32,0:32:93.32:0,93,2519	0/0:13,0:13:27.56:0,28,745
chr10	79702740	.	GCACACA	G	6712.37	PASS	AB=0.875;AC=29;AF=0.518;AN=56;BaseQRankSum=-2.104;DP=570;FS=3.846;HRun=0;HaplotypeScore=172.3084;InbreedingCoeff=0.8913;MQ=52.48;MQ0=8;MQRankSum=-8.093;QD=26.43;ReadPosRankSum=0.644;VQSLOD=4.5527;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:21:27.09:0,27,683	1/1:2,4:7:15.05:294,15,0	0/0:25,0:14:18.06:0,18,587	0/0:27,0:17:18.06:0,18,462	1/1:11,16:28:29.71:365,30,0	0/0:28,0:30:60.18:0,60,1669	0/0:21,0:21:39.13:0,39,1252	1/1:11,4:15:11.97:194,12,0	1/1:10,10:20:32.92:563,33,0	1/1:5,12:18:39.09:717,39,0	1/1:4,11:15:23.27:317,23,0	0/0:16,0:25:42.23:0,42,957	0/0:15,0:24:48.14:0,48,1176	0/0:22,0:34:54.99:0,55,1361	1/1:7,26:34:69.53:1355,70,0	1/1:12,18:33:45.93:849,46,0	0/0:19,0:20:51.17:0,51,1582	0/1:6,1:7:50.88:51,0,145	1/1:4,4:8:12.03:215,12,0	1/1:5,8:13:23.98:378,24,0	1/1:12,1:13:5.98:83,6,0	0/0:8,0:21:37.75:0,38,846	0/0:10,0:15:19.55:0,20,416	0/0:26,0:32:33.09:0,33,769	0/0:13,0:19:30.10:0,30,750	1/1:9,4:14:24.08:474,24,0	1/1:15,10:26:39.01:669,39,0	1/1:0,3:3:9.03:188,9,0
chr10	79702804	.	AGGGAGG	A	2116.47	PASS	AB=0.988;AC=22;AF=0.393;AN=56;BaseQRankSum=3.175;DP=596;FS=2.395;HRun=0;HaplotypeScore=155.8229;InbreedingCoeff=0.3581;MQ=50.76;MQ0=39;MQRankSum=-5.878;QD=8.64;ReadPosRankSum=-3.610;VQSLOD=2.0981;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:19:11.49:11,0,55	0/0:9,0:8:8.15:0,8,64	0/0:75,0:21:46.52:0,47,804	0/0:94,0:19:26.61:0,27,461	0/0:15,0:14:1.24:0,1,173	0/0:22,0:22:63.04:0,63,1765	0/0:24,0:24:62.91:0,63,1534	0/1:31,0:31:99:148,0,164	0/0:18,0:18:15.54:0,16,404	0/1:20,0:20:1.98:2,0,463	0/1:12,0:10:0.81:1,0,1	1/1:12,5:17:24.78:361,25,0	1/1:9,9:20:47.86:726,48,0	1/1:10,7:17:14.77:234,15,0	0/0:25,0:25:11.03:0,11,455	0/1:22,0:23:24.63:25,0,362	0/0:20,0:20:60.15:0,60,1442	0/1:7,0:4:13.08:13,0,94	0/0:10,0:8:1.83:0,2,51	0/1:14,0:13:11.40:11,0,51	0/0:11,0:11:9.26:0,9,141	1/1:4,5:9:14.77:311,15,0	1/1:5,2:8:12.44:192,12,0	1/1:10,4:13:6.70:149,7,0	1/1:1,0:13:16.95:91,17,0	0/1:17,0:16:23.88:24,0,341	0/0:14,0:14:29.53:0,30,460	0/0:12,0:8:2.38:0,2,66
chr10	79702825	.	G	GA	953.04	PASS	AB=0.973;AC=24;AF=0.429;AN=56;BaseQRankSum=5.058;DP=553;FS=3.052;HRun=1;HaplotypeScore=90.8674;InbreedingCoeff=-0.4652;MQ=37.52;MQ0=59;MQRankSum=-3.175;QD=2.72;ReadPosRankSum=-1.039;VQSLOD=-0.6681;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:19:79.12:79,0,148	0/1:7,0:7:58.79:88,0,59	0/0:53,0:9:21.05:0,21,244	0/0:66,0:2:6.02:0,6,71	0/1:21,0:18:62.07:92,0,62	0/0:21,0:21:51.05:0,51,585	0/1:17,4:19:36.98:37,0,322	0/0:26,0:24:16.83:0,17,266	0/1:20,0:19:82.40:91,0,82	0/1:21,0:20:79.15:79,0,354	1/1:17,0:14:11.13:101,11,0	0/1:15,0:15:16.67:17,0,64	0/1:16,0:15:29.90:30,0,48	0/1:17,0:15:5.24:5,0,41	0/1:20,1:20:78.16:78,0,106	0/1:19,0:20:82.25:82,0,118	0/1:18,0:18:38.14:38,0,394	0/1:10,1:8:7.39:7,0,93	0/0:16,0:14:25.01:0,25,244	0/1:11,0:11:11.45:11,0,52	0/1:15,0:15:21:33,0,21	0/1:8,0:8:15.36:26,0,15	1/1:4,0:3:6.06:22,6,0	0/1:10,0:8:27.63:28,0,34	0/1:13,0:13:91.95:92,0,121	0/1:24,0:20:23.91:24,0,381	0/1:14,5:17:56.27:56,0,138	0/0:20,0:11:24:0,24,247
chr10	79702827	.	GA	G	896.99	PASS	AB=0.910;AC=18;AF=0.321;AN=56;BaseQRankSum=4.410;DP=557;FS=1.673;HRun=2;HaplotypeScore=85.1543;InbreedingCoeff=-0.4883;MQ=37.28;MQ0=63;MQRankSum=3.109;QD=2.82;ReadPosRankSum=1.654;VQSLOD=-0.0221;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:18:33.74:34,0,198	0/1:8,0:8:14:14,0,112	0/0:52,0:9:19.61:0,20,215	0/0:64,0:2:6.02:0,6,70	0/1:21,0:17:29.28:29,0,128	0/0:18,0:17:39.09:0,39,460	0/0:20,0:18:32:0,32,305	0/1:27,1:25:54.94:79,0,55	0/1:20,1:20:89.98:90,0,134	0/1:20,1:20:23.29:23,0,237	0/0:16,0:13:19.22:0,19,192	0/1:6,9:16:35.32:131,0,35	0/1:10,6:15:94.27:104,0,94	0/1:11,5:15:12.81:90,0,13	0/1:20,1:20:69.07:69,0,86	0/1:17,1:18:99:112,0,146	0/0:18,0:18:39.85:0,40,495	0/0:11,0:8:5.53:0,6,121	0/1:17,1:15:23.13:23,0,167	0/0:13,0:12:9.23:0,9,153	0/1:15,0:15:25.72:32,0,26	0/1:8,0:8:7.66:8,0,42	0/0:3,1:3:4.46:0,4,17	0/1:5,6:9:15.80:66,0,16	0/1:15,0:15:31.71:32,0,176	0/1:22,2:21:71.95:72,0,290	0/1:18,0:16:47.34:47,0,126	0/0:23,0:14:15.43:0,15,301
chr10	79702828	.	A	AG	1984.48	PASS	AB=0.888;AC=19;AF=0.339;AN=56;BaseQRankSum=2.106;DP=530;FS=1.602;HRun=1;HaplotypeScore=75.1273;InbreedingCoeff=-0.5250;MQ=37.79;MQ0=63;MQRankSum=2.210;QD=6.36;ReadPosRankSum=0.417;VQSLOD=0.6291;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:15:14.17:0,14,257	0/1:6,1:7:40.76:41,0,89	0/0:52,0:9:20.90:0,21,239	0/0:62,0:2:6:0,6,61	0/1:18,3:18:99:106,0,126	0/0:17,0:16:43.18:0,43,516	0/0:19,0:17:33.45:0,33,373	0/1:25,2:24:22.63:105,0,23	0/1:11,9:19:99:219,0,125	0/1:16,2:17:98.98:99,0,176	0/0:13,0:10:19.22:0,19,194	0/1:16,0:16:99:128,0,104	0/1:17,0:16:99:103,0,193	0/1:17,1:16:44.67:89,0,45	0/1:12,7:18:78.30:301,0,78	0/1:11,4:15:99:267,0,107	0/0:18,0:18:39.25:0,39,527	0/1:9,1:7:34.10:34,0,78	0/1:17,0:14:29.09:29,0,138	0/1:11,1:11:28.69:29,0,128	0/1:10,3:13:25.37:107,0,25	0/1:8,0:8:9.41:9,0,97	0/0:4,0:3:7.34:0,7,39	0/1:11,0:9:43.97:66,0,44	0/0:15,0:15:26.96:0,27,222	0/1:22,4:21:99:191,0,183	0/1:10,4:12:99:198,0,112	0/1:19,4:14:21.67:22,0,269
chr10	79703151	.	TCTCTTCCC	T	119.10	PASS	AB=0.988;AC=7;AF=0.125;AN=56;BaseQRankSum=6.173;DP=517;FS=14.019;HRun=0;HaplotypeScore=114.3111;InbreedingCoeff=0.1456;MQ=47.06;MQ0=80;MQRankSum=-2.835;QD=1.75;ReadPosRankSum=-3.598;VQSLOD=0.4326;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:13:9.78:0,10,45	0/0:4,0:3:8.98:0,9,96	0/0:60,0:17:34.76:0,35,466	0/0:87,0:18:40.30:0,40,581	0/0:13,0:8:17.80:0,18,205	0/0:12,0:10:15.02:0,15,545	0/0:22,0:13:26.91:0,27,595	0/0:37,0:14:36.64:0,37,252	0/0:11,0:10:23.89:0,24,239	0/0:16,0:12:34.72:0,35,240	0/0:8,0:6:8.91:0,9,89	0/1:10,0:9:2.80:3,0,70	0/1:10,0:10:25.68:26,0,58	0/0:5,0:5:4.18:0,4,23	0/0:11,0:11:32.90:0,33,430	0/0:13,0:12:29.93:0,30,448	0/0:21,0:19:48.11:0,48,908	0/0:9,0:8:23.79:0,24,303	0/0:18,0:13:23.68:0,24,183	0/0:12,0:11:23.91:0,24,240	0/0:15,0:7:14.48:0,14,290	0/1:10,0:10:46.74:47,0,83	0/1:4,0:3:13.57:14,0,15	0/1:15,0:13:18.94:19,0,32	1/1:3,15:18:9.01:136,9,0	0/0:17,0:13:38.57:0,39,537	0/0:15,0:15:44.80:0,45,502	0/0:23,0:16:38.80:0,39,394
chr10	79703153	.	TCTTCC	T	2322.33	PASS	AB=0.994;AC=38;AF=0.679;AN=56;BaseQRankSum=-0.432;DP=526;FS=2.017;HRun=0;HaplotypeScore=93.1729;InbreedingCoeff=0.1134;MQ=48.12;MQ0=70;MQRankSum=0.296;QD=6.16;ReadPosRankSum=-0.497;VQSLOD=2.0528;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:13:8.50:42,8,0	1/1:4,0:3:4.86:41,5,0	0/1:66,0:18:13.26:13,0,131	0/0:93,0:18:6.41:0,6,131	0/1:12,0:8:9.56:73,0,10	0/0:13,0:11:12.74:0,13,184	0/0:23,0:15:20:0,20,221	1/1:17,14:15:41.90:348,42,0	1/1:10,0:9:19.74:135,20,0	1/1:16,0:13:37.29:345,37,0	1/1:9,0:6:4.24:48,4,0	1/1:10,0:9:7.08:41,7,0	1/1:10,0:10:12.55:107,13,0	0/1:6,0:6:13.36:34,0,13	0/1:11,0:11:27.84:87,0,28	0/1:13,0:12:6.51:96,0,7	0/0:20,0:18:12.50:0,13,271	0/1:9,0:8:22.69:95,0,23	1/1:7,11:13:26.76:201,27,0	1/1:14,0:13:23.67:160,24,0	0/1:17,0:9:45.16:45,0,71	1/1:11,0:11:8.10:47,8,0	1/1:4,0:3:0.19:0,0,0	1/1:17,0:14:5.18:23,5,0	1/1:18,0:18:5.45:25,5,0	0/1:16,1:13:59.28:152,0,59	0/1:14,0:14:13.57:152,0,14	0/1:23,0:16:1.25:179,0,1
chr10	79703607	.	CGG	C	638.93	PASS	AB=0.743;AC=15;AF=0.357;AN=42;BaseQRankSum=-4.496;DP=140;FS=7.060;HRun=10;HaplotypeScore=32.0396;InbreedingCoeff=0.3488;MQ=89.19;MQ0=9;MQRankSum=-0.097;QD=10.83;ReadPosRankSum=3.977;VQSLOD=-0.0582;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:9:18.05:200,18,0	./.	0/0:21,0:11:5.92:0,6,222	0/0:27,0:16:29.37:0,29,260	./.	./.	0/0:6,0:5:3.01:0,3,37	0/0:2,0:2:2.90:0,3,16	0/1:5,1:6:22.45:22,0,30	0/0:0,0:2:5.24:0,5,21	0/0:2,0:2:5.24:0,5,21	0/1:4,2:6:11.02:65,0,11	0/1:4,3:7:9.98:83,0,10	1/1:5,0:5:5.69:45,6,0	0/0:2,0:3:3.85:0,4,22	0/0:1,0:4:2.50:0,2,9	0/0:3,0:3:3.01:0,3,48	0/0:0,0:1:2.50:0,2,9	./.	./.	./.	1/1:1,5:6:6.02:67,6,0	1/1:1,4:5:6.02:66,6,0	1/1:1,5:5:12.03:134,12,0	1/1:3,5:8:9.02:99,9,0	0/0:0,0:1:2.50:0,2,9	0/0:5,0:4:8.46:0,8,54	./.
chr10	79704016	.	A	ATC	4453.03	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.805;DP=443;FS=12.340;HRun=0;HaplotypeScore=48.5730;InbreedingCoeff=0.9919;MQ=70.38;MQ0=0;MQRankSum=0.353;QD=51.18;ReadPosRankSum=2.179;VQSLOD=4.5337;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:30.10:0,30,456	0/0:10,0:10:27.08:0,27,393	0/0:5,0:5:14.70:0,15,152	0/0:9,0:10:27.03:0,27,361	0/0:39,0:39:99:0,114,1720	0/0:21,0:21:63.20:0,63,941	0/0:7,0:7:21.07:0,21,319	0/0:29,0:29:84.27:0,84,1248	0/0:8,0:8:21.07:0,21,322	0/0:24,0:24:72.24:0,72,1103	0/0:29,0:29:87.30:0,87,1329	1/1:0,9:9:24.08:464,24,0	1/1:1,23:24:66.23:1274,66,0	1/1:0,13:13:33.11:636,33,0	0/0:15,0:15:45.15:0,45,685	0/0:10,0:10:30.10:0,30,459	0/0:20,0:20:57.19:0,57,869	0/0:21,0:21:63.18:0,63,938	0/0:9,0:9:27.09:0,27,413	0/0:17,0:17:51.17:0,51,781	0/0:7,0:7:21.07:0,21,322	1/1:1,13:14:36.12:689,36,0	1/1:1,19:20:51.17:984,51,0	1/1:0,7:7:21.07:406,21,0	0/0:17,0:17:48.16:0,48,734	0/0:16,0:16:45.14:0,45,670	0/0:16,0:16:48.15:0,48,712	0/0:15,0:15:39.13:0,39,595
chr10	79705852	.	T	TTG	4117.66	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=2.214;DP=497;FS=5.067;HRun=0;HaplotypeScore=60.4608;InbreedingCoeff=0.9943;MQ=83.11;MQ0=0;MQRankSum=-1.505;QD=44.28;ReadPosRankSum=0.800;VQSLOD=5.1947;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:33.11:0,33,473	0/0:5,0:5:15.05:0,15,215	0/0:18,0:18:48.14:0,48,666	0/0:14,0:14:39.13:0,39,543	0/0:29,0:27:78.24:0,78,1099	0/0:20,0:20:54.18:0,54,774	0/0:11,0:11:30.10:0,30,430	0/0:33,0:33:87.28:0,87,1231	0/0:11,0:11:30.10:0,30,430	0/0:16,0:16:42.13:0,42,587	0/0:26,0:26:78.26:0,78,1118	1/1:2,21:23:54.19:990,54,0	1/1:2,13:15:26.99:495,27,0	1/1:2,15:18:42.14:764,42,0	0/0:13,0:13:36.12:0,36,515	0/0:22,0:22:63.21:0,63,902	0/0:24,0:24:63.20:0,63,886	0/0:14,0:14:36.12:0,36,514	0/0:12,0:12:33.11:0,33,473	0/0:32,0:32:90.30:0,90,1290	0/0:14,0:14:42.14:0,42,602	1/1:0,15:15:45.15:823,45,0	1/1:0,14:15:39.03:715,39,0	1/1:1,6:7:18.06:330,18,0	0/0:17,0:17:48.13:0,48,652	0/0:21,0:21:60.20:0,60,859	0/0:31,0:30:84.27:0,84,1186	0/0:9,0:9:27.09:0,27,387
chr10	79706578	.	G	GAA	3864.29	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.747;DP=554;FS=1.962;HRun=6;HaplotypeScore=82.5969;InbreedingCoeff=0.9895;MQ=73.11;MQ0=2;MQRankSum=-8.442;QD=33.90;ReadPosRankSum=0.158;VQSLOD=3.4608;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:12:22.46:80,22,0	0/0:7,0:7:18.06:0,18,220	0/0:17,0:15:28.75:0,29,296	0/0:15,0:14:14.14:0,14,172	0/0:29,0:29:81.25:0,81,987	0/0:30,0:29:81.23:0,81,975	0/0:24,0:24:60.15:0,60,707	0/0:30,0:30:87.26:0,87,1050	0/0:15,0:15:45.14:0,45,549	0/0:25,0:25:63.19:0,63,769	0/0:26,0:26:72.22:0,72,878	1/1:5,10:15:39.10:615,39,0	1/1:5,17:22:63.21:1040,63,0	1/1:7,13:20:39.13:658,39,0	0/0:18,0:18:48.15:0,48,585	0/0:21,0:21:60.18:0,60,731	0/0:18,0:18:48.05:0,48,583	0/0:14,0:14:30.09:0,30,364	0/0:21,0:21:63.19:0,63,757	0/0:41,0:41:99:0,111,1324	0/0:9,0:9:21.06:0,21,256	1/1:4,15:19:42.10:671,42,0	1/1:4,7:11:21.07:332,21,0	1/1:4,11:15:30.04:468,30,0	0/0:0,0:22:54.89:0,55,240	0/0:18,0:18:51.16:0,51,620	0/0:33,0:33:93.27:0,93,1120	0/0:7,0:7:14.57:0,15,182
chr10	79706593	.	C	CT	1662.15	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.496;DP=527;FS=4.593;HRun=4;HaplotypeScore=76.7441;InbreedingCoeff=0.9789;MQ=68.60;MQ0=2;MQRankSum=-10.151;QD=20.27;ReadPosRankSum=-2.137;VQSLOD=2.7205;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:30.10:0,30,419	0/0:6,0:6:18.06:0,18,251	0/0:17,0:15:11.54:0,12,381	0/0:14,0:13:29.35:0,29,359	0/0:30,0:30:90.28:0,90,1237	0/0:27,0:26:75.21:0,75,1022	0/0:16,0:16:48.15:0,48,654	0/0:33,0:33:96.31:0,96,1327	0/0:17,0:17:51.17:0,51,711	0/0:21,0:21:63.21:0,63,877	0/0:25,0:25:75.25:0,75,1049	1/1:5,7:12:28.41:289,28,0	1/1:4,18:22:56.90:607,57,0	1/1:0,11:11:30.07:323,30,0	0/0:18,0:18:54.18:0,54,753	0/0:23,0:23:45.38:0,45,898	0/0:23,0:23:60.15:0,60,815	0/0:20,0:20:56.36:0,56,718	0/0:18,0:18:54.15:0,54,707	0/0:40,0:40:99:0,114,1592	0/0:6,0:6:18.06:0,18,252	1/1:6,6:12:21.22:196,21,0	1/1:3,5:8:15.18:149,15,0	1/1:2,15:17:25.51:283,26,0	0/0:22,0:22:57.19:0,57,796	0/0:20,0:20:60.20:0,60,838	0/0:33,0:33:99:0,99,1376	0/0:5,0:5:12.01:0,12,147
chr10	79706912	.	T	TTGGCTCTTAGGGTG	18846.95	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.506;DP=616;FS=1.843;HRun=0;HaplotypeScore=247.9939;InbreedingCoeff=0.9981;MQ=87.22;MQ0=0;MQRankSum=-15.040;QD=165.32;ReadPosRankSum=3.104;VQSLOD=5.1509;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.20:0,57,2300	0/0:11,0:11:33.11:0,33,1328	0/0:31,0:31:90.29:0,90,2769	0/0:20,0:19:48.16:0,48,1857	0/0:32,0:32:96.30:0,96,3938	0/0:41,0:41:99:0,120,4819	0/0:13,0:13:39.12:0,39,1497	0/0:25,0:25:72.25:0,72,2828	0/0:15,0:15:42.14:0,42,1843	0/0:33,0:33:96.32:0,96,3688	0/0:24,0:24:69.24:0,69,2810	1/1:9,12:21:63.22:3975,63,0	1/1:8,12:21:57.20:3718,57,0	1/1:7,19:28:78.27:5299,78,0	0/0:34,0:33:99:0,99,3787	0/0:20,0:20:60.21:0,60,2292	0/0:24,0:24:69.67:0,70,2508	0/0:14,0:14:42.14:0,42,1685	0/0:15,0:15:45.15:0,45,1711	0/0:28,0:28:81.23:0,81,3270	0/0:14,0:14:42.14:0,42,1828	1/1:2,4:8:21.03:1245,21,0	1/1:8,8:20:30.10:2036,30,0	1/1:5,9:16:39.13:2575,39,0	0/0:18,0:18:51.16:0,51,1921	0/0:26,0:26:78.27:0,78,3177	0/0:38,0:38:99:0,108,4408	0/0:7,0:7:21.07:0,21,847
chr10	79706930	.	CT	C	1280.62	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.429;DP=597;FS=5.475;HRun=4;HaplotypeScore=126.4191;InbreedingCoeff=0.9932;MQ=84.50;MQ0=0;MQRankSum=-13.976;QD=11.75;ReadPosRankSum=2.981;VQSLOD=1.4852;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.19:0,57,798	0/0:12,0:12:36.11:0,36,489	0/0:22,0:23:53.24:0,53,791	0/0:23,0:22:57.17:0,57,745	0/0:32,0:32:96.32:0,96,1343	0/0:40,0:40:99:0,117,1620	0/0:16,0:16:48.16:0,48,672	0/0:27,0:27:72.24:0,72,1008	0/0:16,0:16:45.15:0,45,630	0/0:30,0:30:84.28:0,84,1172	0/0:23,0:23:66.22:0,66,924	1/1:4,20:24:55.68:343,56,0	1/1:3,18:21:52.89:331,53,0	1/1:4,21:25:61.70:383,62,0	0/0:30,0:29:90.30:0,90,1261	0/0:20,0:20:60.20:0,60,840	0/0:22,0:22:60.16:0,60,804	0/0:14,0:14:39.11:0,39,528	0/0:16,0:16:48.16:0,48,672	0/0:25,0:25:75.25:0,75,1049	0/0:17,0:17:51.17:0,51,713	1/1:1,4:6:13.96:79,14,0	1/1:2,16:18:34.96:205,35,0	1/1:2,13:15:20.53:126,21,0	0/0:21,0:21:60.20:0,60,840	0/0:23,0:23:63.21:0,63,881	0/0:32,0:32:93.31:0,93,1301	0/0:7,0:7:18.06:0,18,252
chr10	79706935	.	GT	G	1702.46	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.025;DP=607;FS=7.620;HRun=4;HaplotypeScore=115.7730;InbreedingCoeff=0.9949;MQ=86.36;MQ0=0;MQRankSum=-13.649;QD=16.69;ReadPosRankSum=1.710;VQSLOD=2.6040;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.19:0,60,869	0/0:11,0:11:33.11:0,33,495	0/0:22,0:22:62.96:0,63,856	0/0:26,0:25:57.83:0,58,763	0/0:37,0:37:99:0,111,1639	0/0:40,0:40:99:0,120,1795	0/0:17,0:17:51.17:0,51,764	0/0:27,0:27:81.27:0,81,1213	0/0:16,0:16:48.16:0,48,717	0/0:31,0:31:93.31:0,93,1387	0/0:24,0:24:72.17:0,72,1029	1/1:2,20:22:62.39:441,62,0	1/1:2,18:20:59.52:428,60,0	1/1:1,21:22:65.44:463,65,0	0/0:30,0:29:90.30:0,90,1349	0/0:23,0:23:69.23:0,69,1032	0/0:22,0:22:66.20:0,66,950	0/0:13,0:13:36.12:0,36,540	0/0:17,0:17:51.17:0,51,762	0/0:30,0:30:90.28:0,90,1307	0/0:18,0:18:54.18:0,54,807	1/1:2,4:6:16.12:109,16,0	1/1:3,16:19:44.45:303,44,0	1/1:0,13:13:20.80:145,21,0	0/0:21,0:21:63.21:0,63,933	0/0:23,0:23:69.23:0,69,1034	0/0:31,0:31:90.30:0,90,1348	0/0:6,0:6:18.06:0,18,270
chr10	79707190	.	C	CTTTT	4895.05	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.701;DP=571;FS=8.815;HRun=7;HaplotypeScore=102.0986;InbreedingCoeff=0.9725;MQ=74.04;MQ0=0;MQRankSum=-10.139;QD=43.71;ReadPosRankSum=-1.529;VQSLOD=2.7520;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.11:0,48,725	0/0:19,0:19:54.17:0,54,840	0/0:11,0:10:21.05:0,21,301	0/0:18,0:18:12.63:0,13,352	0/0:29,0:29:78.24:0,78,1207	0/0:28,0:28:78.26:0,78,1218	0/0:15,0:15:42.14:0,42,640	0/0:36,0:36:90.26:0,90,1367	0/0:17,0:17:48.16:0,48,751	0/0:28,0:28:66.18:0,66,1004	0/0:20,0:20:54.17:0,54,843	1/1:4,15:21:45.14:1003,45,0	1/1:7,12:23:39.13:883,39,0	1/1:6,12:20:33.11:678,33,0	0/0:21,0:21:57.16:0,57,869	0/0:25,0:25:75.26:0,75,1173	0/0:14,0:14:42.14:0,42,654	0/0:25,0:25:69.16:0,69,1028	0/0:24,0:24:63.17:0,63,941	0/0:26,0:26:72.23:0,72,1123	0/0:17,0:17:39.08:0,39,566	1/1:0,8:12:27.09:567,27,0	1/1:3,17:21:45.15:1086,45,0	1/1:2,11:15:30.10:678,30,0	0/0:16,0:16:42.14:0,42,655	0/0:21,0:21:57.18:0,57,891	0/0:29,0:28:81.25:0,81,1237	0/0:2,0:2:6.02:0,6,94
chr10	79707808	.	C	CTCTGGTGTGTCCTATTCATACT	25947.66	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.900;DP=700;FS=10.678;HRun=0;HaplotypeScore=426.6468;InbreedingCoeff=0.9950;MQ=71.48;MQ0=0;MQRankSum=-15.558;QD=172.98;ReadPosRankSum=5.013;VQSLOD=4.0263;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,5964	0/0:14,0:14:42.13:0,42,2256	0/0:13,0:13:32.77:0,33,743	0/0:15,0:14:30.79:0,31,1124	0/0:24,0:24:66.23:0,66,3256	0/0:24,0:24:69.21:0,69,3482	0/0:31,0:31:90.27:0,90,4545	0/0:26,0:26:72.19:0,72,2912	0/0:18,0:18:51.16:0,51,2513	0/0:29,0:29:87.29:0,87,4521	0/0:24,0:24:66.22:0,66,3373	1/1:29,5:34:69.24:5879,69,0	1/1:26,5:31:72.24:6098,72,0	1/1:17,5:24:51.17:4234,51,0	0/0:35,0:35:99:0,105,5831	0/0:26,0:26:75.26:0,75,4038	0/0:37,0:37:99:0,102,5150	0/0:25,0:25:72.14:0,72,3785	0/0:15,0:15:42.14:0,42,2045	0/0:22,0:22:63.20:0,63,3185	0/0:45,0:45:99:0,126,6324	1/1:24,3:27:60.21:4870,60,0	1/1:23,0:23:51.60:3799,52,0	1/1:8,2:11:15.05:1068,15,0	0/0:22,0:22:63.22:0,63,3410	0/0:16,0:15:45.12:0,45,1790	0/0:40,0:40:99:0,114,5894	0/0:6,0:6:18.04:0,18,808
chr10	79708894	.	GAATAT	G	5838.19	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.513;DP=569;FS=8.024;HRun=0;HaplotypeScore=129.4826;InbreedingCoeff=0.9880;MQ=86.24;MQ0=0;MQRankSum=-14.312;QD=58.97;ReadPosRankSum=1.353;VQSLOD=5.3339;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.23:0,72,2243	0/0:3,0:3:9.03:0,9,300	0/0:16,0:16:48.16:0,48,1402	0/0:27,0:27:77.63:0,78,2219	0/0:22,0:22:63.20:0,63,1997	0/0:22,0:22:66.23:0,66,2173	0/0:14,0:14:42.14:0,42,1213	0/0:30,0:30:90.31:0,90,2894	0/0:20,0:20:60.21:0,60,1974	0/0:32,0:32:96.33:0,96,3178	0/0:18,0:18:51.18:0,51,1687	1/1:0,13:13:36.12:837,36,0	1/1:0,20:20:57.20:1314,57,0	1/1:0,21:21:54.19:1254,54,0	0/0:22,0:22:66.23:0,66,2136	0/0:31,0:31:93.32:0,93,3028	0/0:15,0:15:45.15:0,45,1423	0/0:11,0:11:33.11:0,33,1059	0/0:27,0:27:81.28:0,81,2611	0/0:23,0:23:69.22:0,69,2197	0/0:10,0:10:30.10:0,30,998	1/1:0,14:14:42.14:967,42,0	1/1:0,16:16:39.07:855,39,0	1/1:0,15:15:30.07:611,30,0	0/0:31,0:31:93.32:0,93,3036	0/0:24,0:24:72.21:0,72,2228	0/0:27,0:27:63.22:0,63,2048	0/0:17,0:17:51.13:0,51,1448
chr10	79708933	.	G	GGA	1667.12	PASS	AB=0.978;AC=42;AF=0.808;AN=52;BaseQRankSum=0.935;DP=577;FS=25.664;HRun=0;HaplotypeScore=131.8965;InbreedingCoeff=0.0739;MQ=66.69;MQ0=11;MQRankSum=-0.773;QD=3.04;ReadPosRankSum=1.574;VQSLOD=1.1552;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,10:29:9.02:107,9,0	./.	0/1:29,0:16:0:0,0,0	0/1:35,0:20:0:0,0,0	1/1:17,0:16:3:26,3,0	0/1:20,0:19:38.10:222,0,38	0/1:14,4:19:28.43:146,0,28	1/1:42,0:41:49.41:305,49,0	1/1:23,0:21:5.17:46,5,0	1/1:22,0:22:5.80:33,6,0	1/1:20,0:20:8.98:80,9,0	1/1:17,0:17:0.47:1,0,0	1/1:19,0:19:9.40:68,9,0	1/1:21,0:20:3:26,3,0	1/1:20,0:19:14.98:139,15,0	1/1:24,0:24:8.98:88,9,0	0/0:15,0:15:9.46:0,9,81	1/1:12,0:11:2.84:14,3,0	1/1:20,0:20:5.88:36,6,0	1/1:20,0:20:11.98:103,12,0	1/1:10,0:10:3.01:39,3,0	./.	1/1:20,0:19:3:25,3,0	0/1:16,0:15:0:0,0,0	0/1:27,0:27:14.53:149,0,15	0/1:27,0:27:7:47,0,7	0/1:29,0:27:17.69:76,0,18	1/1:10,0:8:2.80:13,3,0
chr10	79708949	.	A	AGG	1386.91	PASS	AB=0.953;AC=19;AF=0.339;AN=56;BaseQRankSum=0.203;DP=589;FS=4.002;HRun=1;HaplotypeScore=103.9499;InbreedingCoeff=-0.2282;MQ=53.96;MQ0=16;MQRankSum=2.507;QD=3.87;ReadPosRankSum=4.732;VQSLOD=-0.6813;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:9.71:0,10,193	0/1:6,0:6:17.16:72,0,17	0/0:27,0:9:15.15:0,15,211	0/0:32,0:12:17.29:0,17,208	0/1:5,11:15:10.07:82,0,10	0/1:26,0:25:8.53:9,0,323	0/1:20,0:20:8.56:9,0,321	0/1:43,0:42:99:213,0,349	0/1:23,0:21:76.66:77,0,154	0/1:16,0:16:90.14:90,0,125	1/1:4,15:18:9.03:133,9,0	0/0:19,0:18:12.11:0,12,81	0/0:20,0:20:22.83:0,23,155	0/0:19,0:18:11.53:0,12,66	0/1:18,0:17:23.82:24,0,88	0/1:24,0:23:65.77:66,0,90	0/0:16,0:16:44.82:0,45,410	0/1:14,0:13:62.19:62,0,72	0/1:23,0:23:99:109,0,212	1/1:17,0:17:29.86:298,30,0	0/1:17,1:18:38.88:39,0,144	0/0:11,0:11:2.78:0,3,24	0/0:15,0:14:2.88:0,3,15	0/0:17,0:16:2.75:0,3,22	0/0:29,0:29:28.32:0,28,467	0/1:34,0:33:99:203,0,361	0/1:22,11:31:2.75:3,0,351	0/1:8,0:6:26.02:61,0,26
chr10	79708978	.	CTG	C	948.21	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-0.195;DP=461;FS=13.018;HRun=0;HaplotypeScore=80.5761;InbreedingCoeff=0.8514;MQ=86.68;MQ0=9;MQRankSum=-1.309;QD=15.29;ReadPosRankSum=-1.926;VQSLOD=2.3534;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:42.14:0,42,833	0/0:2,0:2:6.02:0,6,112	0/0:31,0:20:39.23:0,39,904	0/0:43,0:27:47.61:0,48,918	0/0:18,0:17:44.82:0,45,790	0/0:25,0:25:41.78:0,42,1129	0/0:22,0:22:63.21:0,63,1220	0/0:22,0:22:24.23:0,24,990	0/0:14,0:14:36.09:0,36,636	0/0:11,0:11:17.66:0,18,487	0/0:10,0:10:11.53:0,12,398	1/1:1,10:10:5.63:97,6,0	1/1:0,10:10:18.06:289,18,0	1/1:0,8:8:6.02:98,6,0	0/0:21,0:21:35.48:0,35,879	0/0:13,0:12:6.11:0,6,364	0/0:7,0:7:21.07:0,21,397	0/0:10,0:9:24.08:0,24,447	0/0:22,0:22:45.33:0,45,1037	0/0:18,0:18:37.26:0,37,740	0/0:20,0:20:45.54:0,46,838	1/1:0,9:9:5.95:98,6,0	1/1:7,4:10:18.94:339,19,0	1/1:0,13:13:12.04:196,12,0	0/0:29,0:29:75.26:0,75,1503	0/0:24,0:23:52.12:0,52,1049	0/0:14,0:14:42.12:0,42,746	0/0:2,0:2:6.02:0,6,115
chr10	79709651	.	GACCAAAA	G	2221.96	PASS	AB=0.866;AC=25;AF=0.543;AN=46;BaseQRankSum=-1.007;DP=380;FS=8.904;HRun=0;HaplotypeScore=118.0590;InbreedingCoeff=0.1784;MQ=47.76;MQ0=16;MQRankSum=-0.869;QD=9.92;ReadPosRankSum=-0.975;VQSLOD=1.6851;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:10.98:0,11,269	0/1:2,5:7:6.61:101,0,7	0/0:31,0:4:9.02:0,9,96	0/0:29,0:5:9.47:0,9,106	1/1:17,1:17:0.96:115,1,0	0/0:15,0:15:11.36:0,11,174	0/0:16,0:16:27.16:0,27,427	1/1:19,0:19:1.56:109,2,0	0/1:6,0:6:1.35:1,0,4	1/1:6,0:10:16.81:170,17,0	1/1:21,0:21:13.59:280,14,0	./.	./.	./.	0/1:16,0:18:10.64:226,0,11	1/1:17,0:18:32.92:318,33,0	0/0:29,0:29:33.93:0,34,457	0/1:8,0:8:11.60:81,0,12	0/1:9,2:11:8.19:250,0,8	1/1:16,0:17:23.48:174,23,0	0/1:5,3:8:1.31:50,0,1	./.	./.	1/1:1,0:1:3.01:41,3,0	0/1:18,0:19:19.19:19,0,225	0/1:18,2:19:22.85:156,0,23	0/1:18,2:19:8.72:255,0,9	1/1:1,0:1:3.01:31,3,0
chr10	79709845	.	GA	G	3484.46	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=14.864;DP=639;FS=16.287;HRun=8;HaplotypeScore=72.4403;InbreedingCoeff=0.9098;MQ=71.23;MQ0=0;MQRankSum=0.560;QD=21.51;ReadPosRankSum=3.033;VQSLOD=2.6193;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:31:78.12:753,78,0	0/0:9,0:9:27.08:0,27,326	0/0:14,0:14:30.08:0,30,353	0/1:7,0:7:8.09:8,0,59	0/0:27,0:27:69.20:0,69,822	0/0:22,0:22:60.11:0,60,693	0/0:29,0:30:87.12:0,87,1019	0/0:36,0:36:90.22:0,90,1051	0/0:21,0:21:51.16:0,51,616	0/0:25,0:25:63.66:0,64,762	0/0:28,0:28:78.23:0,78,930	1/1:3,18:21:45.06:434,45,0	1/1:5,13:18:38.09:354,38,0	1/1:3,17:20:42.06:406,42,0	0/0:27,0:27:78.24:0,78,942	0/0:27,0:27:60.15:0,60,709	0/0:35,0:35:96.28:0,96,1149	0/0:32,0:31:96.29:0,96,1160	0/0:20,0:20:60.18:0,60,725	0/0:25,0:25:69.21:0,69,834	0/0:35,0:35:93.28:0,93,1112	1/1:4,18:22:54.08:522,54,0	1/1:4,9:13:33.04:313,33,0	1/1:1,11:12:33.05:319,33,0	1/1:2,16:18:39.06:377,39,0	0/0:26,0:24:72.15:0,72,822	0/0:33,0:32:84.13:0,84,965	0/0:5,0:5:6.02:0,6,72
chr10	79709990	.	C	CAT	4373.85	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-6.280;DP=604;FS=2.636;HRun=0;HaplotypeScore=80.2604;InbreedingCoeff=0.9961;MQ=80.51;MQ0=1;MQRankSum=-1.129;QD=40.88;ReadPosRankSum=4.001;VQSLOD=6.6015;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.21:0,90,1254	0/0:13,0:13:39.11:0,39,554	0/0:25,0:24:54.88:0,55,841	0/0:23,0:21:56.72:0,57,641	0/0:28,0:28:78.17:0,78,1063	0/0:27,0:27:78.26:0,78,1147	0/0:15,0:15:30.10:0,30,442	0/0:27,0:27:75.22:0,75,1021	0/0:18,0:18:54.17:0,54,775	0/0:31,0:31:90.23:0,90,1261	0/0:26,0:26:75.24:0,75,1083	1/1:2,17:20:45.15:837,45,0	1/1:0,17:19:36.12:674,36,0	1/1:1,17:18:42.14:786,42,0	0/0:24,0:24:72.24:0,72,1058	0/0:14,0:14:36.12:0,36,530	0/0:17,0:17:48.13:0,48,684	0/0:14,0:14:24.26:0,24,475	0/0:33,0:33:93.29:0,93,1332	0/0:24,0:24:66.21:0,66,952	0/0:19,0:19:54.16:0,54,769	1/1:0,15:14:36.12:673,36,0	1/1:0,26:26:60.10:1122,60,0	1/1:1,8:9:15.05:281,15,0	0/0:25,0:25:75.23:0,75,1081	0/0:22,0:22:63.19:0,63,891	0/0:30,0:30:90.29:0,90,1300	0/0:11,0:11:33.11:0,33,478
chr10	79710549	.	C	CT	1922.66	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=9.772;DP=559;FS=33.779;HRun=0;HaplotypeScore=98.4344;InbreedingCoeff=0.9817;MQ=82.80;MQ0=0;MQRankSum=-2.932;QD=37.70;ReadPosRankSum=0.098;VQSLOD=1.3667;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1635	0/0:7,0:7:21.07:0,21,294	0/0:24,0:24:64.37:0,64,747	0/0:15,0:15:42.06:0,42,547	0/0:26,0:26:78.26:0,78,1088	0/0:28,0:28:81.26:0,81,1113	0/0:29,0:29:87.28:0,87,1199	0/0:38,0:38:99:0,114,1595	0/0:17,0:17:51.17:0,51,713	0/0:28,0:28:84.28:0,84,1172	0/0:32,0:32:93.31:0,93,1298	1/1:0,9:9:24.08:380,24,0	1/1:0,16:16:42.14:670,42,0	1/1:0,8:8:21.07:335,21,0	0/0:17,0:17:51.17:0,51,699	0/0:16,0:16:48.16:0,48,671	0/0:22,0:22:66.22:0,66,922	0/0:11,0:11:30.10:0,30,420	0/0:25,0:25:75.25:0,75,1048	0/0:30,0:30:90.29:0,90,1240	0/0:26,0:26:75.24:0,75,1028	1/1:1,3:4:9.03:144,9,0	1/1:0,5:5:15.05:240,15,0	1/1:0,9:9:21.07:335,21,0	0/0:23,0:23:69.23:0,69,965	0/0:22,0:22:63.21:0,63,880	0/0:33,0:33:96.32:0,96,1342	./.
chr10	79710856	.	A	AT	23373.18	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=10.321;DP=709;FS=3.793;HRun=1;HaplotypeScore=140.8551;InbreedingCoeff=0.9925;MQ=90.21;MQ0=0;MQRankSum=-8.379;QD=40.16;ReadPosRankSum=4.793;VQSLOD=4.2372;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,46:48:99:1978,132,0	1/1:1,12:13:27.09:405,27,0	0/0:30,0:30:81.25:0,81,1017	0/0:30,0:30:81.24:0,81,1007	1/1:0,18:18:48.16:719,48,0	0/0:26,0:26:75.24:0,75,973	0/0:28,0:28:81.25:0,81,1036	1/1:3,32:35:99:1420,99,0	1/1:0,25:25:66.22:989,66,0	1/1:3,25:28:81.27:1207,81,0	1/1:0,25:25:63.13:894,63,0	1/1:3,19:22:60.20:888,60,0	1/1:1,24:25:69.23:1034,69,0	1/1:3,24:27:72.21:1054,72,0	1/1:4,41:45:99:1754,117,0	1/1:1,38:39:99:1664,111,0	0/0:13,0:13:39.13:0,39,506	1/1:2,15:17:36.12:533,36,0	1/1:3,16:19:54.17:784,54,0	1/1:2,24:26:75.21:1098,75,0	1/1:1,35:36:99:1529,102,0	1/1:2,15:17:45.08:625,45,0	1/1:1,11:12:33.11:494,33,0	1/1:3,19:22:60.15:854,60,0	1/1:0,18:18:51.17:764,51,0	1/1:1,32:33:96.33:1439,96,0	1/1:1,27:28:72.24:1069,72,0	1/1:0,4:4:12.04:180,12,0
chr10	79710933	.	CT	C	4813.20	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.549;DP=661;FS=0.000;HRun=2;HaplotypeScore=100.0273;InbreedingCoeff=0.9928;MQ=64.64;MQ0=0;MQRankSum=-0.143;QD=36.19;ReadPosRankSum=3.872;VQSLOD=4.9681;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.31:0,93,1390	0/0:9,0:9:21.06:0,21,295	0/0:16,0:16:13.11:0,13,639	0/0:24,0:22:63.14:0,63,891	0/0:30,0:30:87.28:0,87,1283	0/0:20,0:20:60.20:0,60,899	0/0:25,0:25:72.24:0,72,1079	0/0:42,0:42:99:0,123,1792	0/0:25,0:25:72.24:0,72,1078	0/0:13,0:13:35.98:0,36,531	0/0:19,0:19:57.18:0,57,836	1/1:1,24:25:75.23:960,75,0	1/1:1,29:30:90.27:1151,90,0	1/1:2,17:19:54.18:701,54,0	0/0:35,0:35:99:0,102,1488	0/0:28,0:28:84.27:0,84,1238	0/0:19,0:19:57.19:0,57,853	0/0:14,0:14:42.14:0,42,630	0/0:28,0:27:81.27:0,81,1214	0/0:22,0:22:63.21:0,63,943	0/0:43,0:43:99:0,126,1824	1/1:0,11:11:27.09:350,27,0	1/1:2,7:9:21.07:268,21,0	1/1:2,37:39:99:1383,108,0	0/0:17,0:17:51.17:0,51,765	0/0:24,0:24:69.23:0,69,1035	0/0:36,0:36:93.32:0,93,1394	0/0:8,0:8:24.08:0,24,359
chr10	79711089	.	GTCTCTCTC	G	413.10	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.472;DP=596;FS=1.186;HRun=0;HaplotypeScore=155.0643;InbreedingCoeff=0.8735;MQ=81.38;MQ0=6;MQRankSum=-1.900;QD=29.51;ReadPosRankSum=-0.060;VQSLOD=3.5424;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:80.98:0,81,2541	0/0:5,0:5:15.05:0,15,573	0/0:60,0:29:50.71:0,51,906	0/0:66,0:43:31.55:0,32,1163	0/0:10,0:10:30.09:0,30,1103	0/0:26,0:26:63.14:0,63,2039	0/0:30,0:30:90.31:0,90,3577	0/0:25,0:25:66.17:0,66,2130	0/0:16,0:16:48.16:0,48,1881	0/0:19,0:19:57.20:0,57,2137	0/0:9,0:9:24.08:0,24,884	0/0:11,0:11:33.11:0,33,1269	0/0:15,0:15:45.14:0,45,1369	0/0:14,0:14:33.11:0,33,1216	0/0:23,0:23:66.20:0,66,2496	0/0:19,0:19:51.16:0,51,1768	0/0:43,0:43:99:0,117,4917	0/0:18,0:18:48.10:0,48,1665	0/0:8,0:8:24.08:0,24,684	0/0:19,0:19:51.16:0,51,1832	0/0:24,0:24:69.19:0,69,2328	0/0:20,0:20:60.21:0,60,2244	0/0:6,0:6:18.06:0,18,546	0/0:23,0:24:66.70:0,67,2792	1/1:0,14:14:18.06:504,18,0	0/0:13,0:13:36.12:0,36,1264	0/0:11,0:12:36.12:0,36,1308	0/0:2,0:2:6.02:0,6,177
chr10	79711097	.	C	CTG	1464.57	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.438;DP=558;FS=2.368;HRun=0;HaplotypeScore=82.1085;InbreedingCoeff=0.8522;MQ=75.74;MQ0=5;MQRankSum=0.787;QD=34.87;ReadPosRankSum=2.433;VQSLOD=6.0271;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,41:41:81.28:1559,81,0	0/0:5,0:5:15.05:0,15,229	0/0:48,0:25:35.68:0,36,455	0/0:48,0:32:15.35:0,15,400	0/0:13,0:13:36.07:0,36,470	0/0:19,0:19:51.16:0,51,745	0/0:30,0:30:87.28:0,87,1304	0/0:23,0:23:59.97:0,60,797	0/0:17,0:17:48.13:0,48,682	0/0:20,0:20:60.17:0,60,826	0/0:11,0:11:33.07:0,33,422	0/0:13,0:12:36.10:0,36,527	0/0:15,0:15:41.78:0,42,563	0/0:14,0:14:39.08:0,39,530	0/0:20,0:20:60.20:0,60,915	0/0:19,0:19:51.13:0,51,713	0/0:41,0:41:99:0,120,1810	0/0:16,0:16:48.06:0,48,655	0/0:8,0:8:24.04:0,24,298	0/0:18,0:18:51.16:0,51,752	0/0:26,0:26:69.15:0,69,935	0/0:19,0:19:57.17:0,57,827	0/0:6,0:6:18.05:0,18,252	0/0:26,0:26:71.99:0,72,1048	0/0:15,0:15:12.80:0,13,41	0/0:11,0:11:33.11:0,33,504	0/0:12,0:12:35.98:0,36,448	0/0:2,0:2:6.02:0,6,92
chr10	79711655	.	A	AAGTG	7213.37	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-12.225;DP=543;FS=9.936;HRun=0;HaplotypeScore=134.3277;InbreedingCoeff=0.9772;MQ=88.41;MQ0=1;MQRankSum=-5.188;QD=68.05;ReadPosRankSum=2.775;VQSLOD=6.5660;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.15:0,57,1014	0/0:6,0:6:10.71:0,11,44	0/0:22,0:22:59.79:0,60,1016	0/0:17,0:17:42.14:0,42,739	0/0:40,0:40:99:0,105,437	0/0:28,0:28:81.25:0,81,1452	0/0:15,0:15:42.14:0,42,798	0/0:28,0:28:73.27:0,73,299	0/0:17,0:17:34.82:0,35,142	0/0:20,0:20:47.22:0,47,193	0/0:25,0:25:64.28:0,64,263	1/1:0,15:15:42.14:1132,42,0	1/1:0,19:20:54.19:1457,54,0	1/1:3,14:19:45.15:1199,45,0	0/0:14,0:14:37.50:0,37,153	0/0:17,0:17:40.18:0,40,164	0/0:13,0:13:39.13:0,39,729	0/0:22,0:22:53.48:0,53,218	0/0:21,0:21:53.05:0,53,215	0/0:26,0:26:59.19:0,59,248	0/0:11,0:11:26.78:0,27,110	1/1:2,16:18:51.18:1333,51,0	1/1:1,17:17:39.13:1041,39,0	1/1:0,16:15:38.75:1050,39,0	0/0:17,0:17:48.16:0,48,912	0/0:28,0:28:64.11:0,64,259	0/0:23,0:23:50.89:0,51,208	0/0:6,0:6:8.04:0,8,33
chr10	79711657	.	G	GT	12923.73	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-1.923;DP=552;FS=4.510;HRun=1;HaplotypeScore=83.9978;InbreedingCoeff=0.9830;MQ=89.32;MQ0=1;MQRankSum=-3.808;QD=30.99;ReadPosRankSum=2.598;VQSLOD=4.6213;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.17:0,60,761	1/1:0,5:5:12.04:180,12,0	0/0:24,0:24:59.77:0,60,703	0/0:17,0:17:40.93:0,41,462	1/1:0,40:40:99:1743,117,0	0/0:28,0:28:81.25:0,81,1027	0/0:14,0:14:42.14:0,42,545	1/1:0,28:28:84.28:1256,84,0	1/1:0,18:18:39.13:584,39,0	1/1:1,17:19:57.18:815,57,0	1/1:1,25:26:72.24:1079,72,0	1/1:14,0:14:31.08:99,31,0	1/1:19,0:19:39.78:126,40,0	1/1:19,0:19:27:93,27,0	1/1:2,15:17:42.14:630,42,0	1/1:0,17:17:45.15:675,45,0	0/0:13,0:13:39.13:0,39,506	1/1:0,22:22:60.20:899,60,0	1/1:2,19:21:60.20:888,60,0	1/1:1,24:25:66.22:981,66,0	1/1:0,12:12:30.10:450,30,0	1/1:18,0:18:32.41:100,32,0	1/1:18,0:17:25.19:83,25,0	1/1:17,0:16:27.65:89,28,0	0/0:18,0:18:51.16:0,51,649	1/1:1,28:29:78.26:1166,78,0	1/1:2,25:27:57:854,57,0	1/1:0,6:6:9.03:135,9,0
chr10	79712687	.	A	AATT	3851.37	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-3.302;DP=506;FS=4.414;HRun=0;HaplotypeScore=122.6361;InbreedingCoeff=0.8936;MQ=72.74;MQ0=0;MQRankSum=-3.176;QD=41.86;ReadPosRankSum=0.447;VQSLOD=4.9497;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:4:18.66:19,0,61	0/0:15,0:15:29.41:0,29,194	0/0:15,0:14:24.90:0,25,344	0/0:12,0:12:26.70:0,27,227	0/0:34,0:34:76.10:0,76,445	0/0:27,0:27:72.21:0,72,1076	0/0:17,0:17:48.12:0,48,673	0/0:26,0:26:60.08:0,60,400	0/0:13,0:13:31.75:0,32,232	0/0:24,0:24:59.91:0,60,341	0/0:19,0:19:45.48:0,45,263	1/1:2,13:16:36.12:736,36,0	1/1:3,12:16:33.11:678,33,0	1/1:3,11:14:21.06:398,21,0	0/0:24,0:24:66.36:0,66,425	0/0:18,0:18:39.89:0,40,207	0/0:8,0:8:18.05:0,18,264	0/0:12,0:12:21.37:0,21,113	0/0:14,0:14:32:0,32,174	0/0:42,0:42:99:0,102,535	0/0:10,0:10:25.73:0,26,137	1/1:2,15:17:42.06:768,42,0	1/1:1,15:16:42.14:876,42,0	1/1:1,8:9:18.06:377,18,0	0/0:25,0:25:56.80:0,57,320	0/0:22,0:22:48.73:0,49,245	0/0:29,0:29:62.03:0,62,362	0/0:8,0:8:17.04:0,17,83
chr10	79712691	.	A	AT	8448.56	PASS	AB=0.896;AC=44;AF=0.786;AN=56;BaseQRankSum=2.170;DP=499;FS=2.217;HRun=10;HaplotypeScore=87.3368;InbreedingCoeff=0.5137;MQ=70.77;MQ0=0;MQRankSum=-0.848;QD=19.47;ReadPosRankSum=2.702;VQSLOD=5.6304;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:2.84:14,3,0	1/1:4,10:15:11.28:309,11,0	0/0:16,0:15:9.81:0,10,168	0/1:10,0:10:20.80:21,0,26	1/1:3,26:31:59.24:803,59,0	0/0:24,0:24:65.92:0,66,542	0/0:16,0:16:38.94:0,39,320	1/1:7,18:25:29.48:512,29,0	0/1:4,10:14:19.16:226,0,19	1/1:4,20:24:54.10:558,54,0	1/1:3,17:20:7.20:450,7,0	1/1:15,0:15:7.85:97,8,0	0/1:16,0:16:15.42:83,0,15	1/1:13,0:13:18.77:79,19,0	1/1:7,18:25:32.23:530,32,0	1/1:1,16:17:39.10:416,39,0	0/0:9,0:9:19.22:0,19,151	1/1:4,8:12:29.70:307,30,0	1/1:2,13:15:36.54:370,37,0	1/1:5,35:41:98.05:1022,98,0	1/1:1,10:11:24.06:256,24,0	0/1:17,0:17:10.15:107,0,10	1/1:16,0:16:16.89:141,17,0	1/1:8,0:8:16.47:71,16,0	1/1:2,24:26:35.55:583,36,0	1/1:1,21:23:68.82:689,69,0	1/1:7,21:28:45.43:613,45,0	1/1:1,7:8:18.05:192,18,0
chr10	79713553	.	AG	A	5930.58	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=16.314;DP=736;FS=8.743;HRun=1;HaplotypeScore=84.5876;InbreedingCoeff=0.9998;MQ=90.14;MQ0=0;MQRankSum=-1.558;QD=40.07;ReadPosRankSum=2.485;VQSLOD=5.1655;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.32:0,93,1475	0/0:10,0:10:30.10:0,30,477	0/0:22,0:22:66.22:0,66,1000	0/0:36,0:36:95.94:0,96,1428	0/0:27,0:27:75.25:0,75,1169	0/0:40,0:40:99:0,120,1892	0/0:29,0:29:87.28:0,87,1359	0/0:36,0:36:99:0,108,1627	0/0:26,0:26:78.27:0,78,1240	0/0:25,0:25:75.21:0,75,1170	0/0:25,0:25:75.26:0,75,1191	1/1:0,27:27:75.25:1049,75,0	1/1:0,29:29:84.28:1173,84,0	1/1:0,22:22:66.22:921,66,0	0/0:23,0:23:69.24:0,69,1096	0/0:30,0:30:90.31:0,90,1431	0/0:18,0:18:54.16:0,54,837	0/0:17,0:17:51.16:0,51,791	0/0:20,0:20:60.18:0,60,924	0/0:34,0:34:99:0,99,1526	0/0:37,0:37:99:0,111,1771	1/1:0,20:20:57.15:774,57,0	1/1:0,21:21:60.20:838,60,0	1/1:0,29:29:84.28:1175,84,0	0/0:22,0:22:60.20:0,60,959	0/0:41,0:41:99:0,123,1959	0/0:27,0:27:81.27:0,81,1269	0/0:11,0:11:33.11:0,33,516
chr10	79713837	.	ATACAAC	A	23251.27	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=11.275;DP=533;FS=15.700;HRun=0;HaplotypeScore=125.3291;InbreedingCoeff=0.9063;MQ=66.84;MQ0=0;MQRankSum=-12.493;QD=53.09;ReadPosRankSum=3.608;VQSLOD=4.1876;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:17:30.10:701,30,0	1/1:0,5:5:15.05:354,15,0	0/0:14,0:14:36.12:0,36,1015	0/0:9,0:9:24.08:0,24,701	1/1:2,14:16:27.09:637,27,0	0/0:25,0:25:72.23:0,72,2360	0/0:16,0:16:48.16:0,48,1655	1/1:2,32:34:93.04:2064,93,0	1/1:2,19:21:51.18:1205,51,0	1/1:1,19:20:57.20:1347,57,0	1/1:1,14:15:27.09:637,27,0	1/1:2,18:20:45.15:1063,45,0	1/1:1,22:23:50.81:1203,51,0	1/1:5,18:23:54.19:1254,54,0	1/1:3,38:41:99:2332,99,0	1/1:5,18:23:45.15:1063,45,0	0/0:30,1:31:10.42:0,10,2534	1/1:3,0:4:8.99:162,9,0	1/1:3,22:25:66.19:1352,66,0	1/1:3,15:17:42.14:992,42,0	1/1:1,4:5:6.02:142,6,0	1/1:0,10:10:21.07:496,21,0	1/1:1,13:14:33.11:780,33,0	1/1:4,13:17:15.05:354,15,0	1/1:2,17:19:42.14:992,42,0	1/1:0,29:29:87.28:1925,87,0	1/1:1,35:36:90.31:2126,90,0	1/1:1,2:3:3.01:71,3,0
chr10	79714482	.	TCA	T	2244.13	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.153;DP=533;FS=6.686;HRun=0;HaplotypeScore=115.4217;InbreedingCoeff=0.9541;MQ=68.16;MQ0=2;MQRankSum=-1.483;QD=27.37;ReadPosRankSum=2.099;VQSLOD=4.9793;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:48.05:0,48,760	0/0:5,0:5:15.05:0,15,253	0/0:34,0:24:47.90:0,48,772	0/0:47,0:33:68.85:0,69,1056	0/0:21,0:21:48.15:0,48,808	0/0:15,0:15:27.09:0,27,455	0/0:9,0:9:24.06:0,24,377	0/0:24,0:24:60.20:0,60,995	0/0:27,0:27:48.16:0,48,809	0/0:16,0:16:39.13:0,39,635	0/0:12,0:12:26.92:0,27,445	1/1:2,20:21:57.18:733,57,0	1/1:2,12:14:36.12:462,36,0	1/1:0,7:7:14.79:192,15,0	0/0:19,0:19:36.12:0,36,605	0/0:29,0:29:60.16:0,60,980	0/0:26,0:26:60.17:0,60,962	0/0:20,0:20:54.18:0,54,910	0/0:17,0:16:33.11:0,33,547	0/0:18,0:18:45.15:0,45,759	0/0:22,0:22:59.77:0,60,995	1/1:0,17:17:42.14:540,42,0	1/1:4,9:13:23.87:309,24,0	1/1:0,9:9:15.05:193,15,0	0/0:18,0:17:29.78:0,30,475	0/0:25,0:25:66.23:0,66,1113	0/0:18,0:18:45.15:0,45,749	0/0:4,0:4:3.01:0,3,51
chr10	79714568	.	GAATGGAT	G	7385.19	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.971;DP=588;FS=108.595;HRun=0;HaplotypeScore=159.1248;InbreedingCoeff=0.9951;MQ=67.90;MQ0=0;MQRankSum=-13.626;QD=76.14;ReadPosRankSum=-0.181;VQSLOD=1.6460;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,4734	0/0:13,0:13:39.13:0,39,1573	0/0:8,0:8:15.92:0,16,629	0/0:17,0:17:29.52:0,30,1708	0/0:18,0:18:54.19:0,54,2153	0/0:13,0:13:39.12:0,39,1529	0/0:23,0:23:69.24:0,69,2681	0/0:25,0:25:75.20:0,75,2711	0/0:26,0:26:78.27:0,78,3184	0/0:27,0:27:81.26:0,81,2959	0/0:14,0:14:42.14:0,42,1654	1/1:2,16:18:54.10:1378,54,0	1/1:0,20:20:60.21:1667,60,0	1/1:0,14:14:42.14:1171,42,0	0/0:28,0:28:84.22:0,84,3126	0/0:33,0:33:99:0,99,3926	0/0:31,0:31:93.23:0,93,3509	0/0:22,0:22:66.18:0,66,2625	0/0:17,0:17:51.16:0,51,1931	0/0:20,0:20:57.18:0,57,2198	0/0:46,0:46:99:0,138,5518	1/1:0,19:19:54.19:1477,54,0	1/1:0,15:15:38.97:1087,39,0	1/1:1,10:11:23.60:604,24,0	0/0:18,0:17:54.19:0,54,2179	0/0:21,0:21:63.22:0,63,2480	0/0:23,0:23:69.21:0,69,2562	0/0:6,0:6:18.06:0,18,755
chr10	79715415	.	CA	C	5404.09	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=16.699;DP=755;FS=1.953;HRun=2;HaplotypeScore=98.5238;InbreedingCoeff=0.9998;MQ=91.01;MQ0=0;MQRankSum=-2.669;QD=33.36;ReadPosRankSum=3.312;VQSLOD=4.9277;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1802	0/0:11,0:11:33.11:0,33,494	0/0:29,0:29:78.25:0,78,1096	0/0:31,0:31:90.22:0,90,1239	0/0:27,0:27:78.26:0,78,1153	0/0:36,0:36:99:0,105,1570	0/0:25,0:25:75.25:0,75,1110	0/0:33,0:33:96.30:0,96,1371	0/0:29,0:29:84.28:0,84,1255	0/0:33,0:33:99:0,99,1483	0/0:24,0:24:69.23:0,69,1034	1/1:1,24:25:69.22:894,69,0	1/1:0,27:27:66.20:853,66,0	1/1:1,40:41:99:1441,112,0	0/0:24,0:24:69.23:0,69,1031	0/0:38,0:38:99:0,111,1643	0/0:23,0:23:69.23:0,69,1031	0/0:19,0:19:57.14:0,57,804	0/0:19,0:19:54.11:0,54,729	0/0:25,0:25:72.24:0,72,1057	0/0:32,0:32:96.25:0,96,1391	1/1:2,16:18:42.12:544,42,0	1/1:1,15:16:36.12:466,36,0	1/1:0,35:35:93.30:1207,93,0	0/0:19,0:19:51.13:0,51,735	0/0:36,0:36:99:0,108,1617	0/0:29,0:29:84.27:0,84,1234	0/0:10,0:10:30.10:0,30,447
chr10	79715457	.	A	ATGGTCTCCC	2266.26	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.972;DP=774;FS=41.291;HRun=0;HaplotypeScore=228.0239;InbreedingCoeff=0.9997;MQ=91.52;MQ0=0;MQRankSum=-6.975;QD=94.43;ReadPosRankSum=-0.685;VQSLOD=2.1067;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,154,4631	0/0:14,0:14:42.14:0,42,1234	0/0:29,0:29:72.25:0,72,2071	0/0:34,0:34:84.24:0,84,2240	0/0:35,0:35:93.32:0,93,2831	0/0:21,0:21:63.20:0,63,1818	0/0:29,0:29:87.28:0,87,2520	0/0:41,0:41:99:0,114,3314	0/0:25,0:25:72.25:0,72,2154	0/0:32,0:32:90.31:0,90,2699	0/0:20,0:20:57.20:0,57,1719	0/0:30,0:30:81.28:0,81,2478	0/0:29,0:29:72.25:0,72,2158	0/0:32,0:32:87.30:0,87,2593	0/0:27,0:27:78.27:0,78,2298	0/0:33,0:33:93.32:0,93,2779	0/0:27,0:27:81.26:0,81,2354	0/0:13,0:13:36.12:0,36,1103	0/0:17,0:17:45.15:0,45,1306	0/0:30,0:30:90.31:0,90,2730	0/0:36,0:36:99:0,102,3051	0/0:24,0:24:69.24:0,69,2066	0/0:16,0:16:42.14:0,42,1262	0/0:33,0:33:87.30:0,87,2666	1/1:7,15:24:51.18:2361,51,0	0/0:27,0:27:69.23:0,69,2013	0/0:29,0:29:81.25:0,81,2300	0/0:13,0:13:36.12:0,36,1061
chr10	79716714	.	T	TC	7992.76	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=17.958;DP=690;FS=16.258;HRun=1;HaplotypeScore=99.2605;InbreedingCoeff=0.9879;MQ=77.18;MQ0=0;MQRankSum=-5.296;QD=41.63;ReadPosRankSum=1.123;VQSLOD=3.0107;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,42:48:99:1925,132,0	0/0:3,0:3:9.03:0,9,117	0/0:22,0:22:63.20:0,63,814	0/0:13,0:13:36.07:0,36,430	0/0:25,0:25:75.22:0,75,945	0/0:27,0:27:72.19:0,72,915	0/0:12,0:12:33.09:0,33,414	0/0:34,0:34:87.28:0,87,1118	0/0:28,0:28:84.26:0,84,1076	0/0:31,0:30:87.27:0,87,1099	0/0:23,0:23:66.20:0,66,839	1/1:2,27:29:87.15:1229,87,0	1/1:2,31:33:96.31:1407,96,0	1/1:1,15:16:48.16:717,48,0	0/0:30,0:30:87.27:0,87,1115	0/0:27,0:27:81.25:0,81,1037	0/0:27,0:27:78.20:0,78,967	0/0:24,0:24:72.19:0,72,902	0/0:23,0:23:66.21:0,66,856	0/0:35,0:35:99:0,105,1333	0/0:22,0:22:60.19:0,60,775	1/1:2,21:23:69.05:956,69,0	1/1:2,19:21:54.17:789,54,0	1/1:1,21:22:66.21:968,66,0	0/0:28,0:28:81.25:0,81,1038	0/0:28,0:28:84.27:0,84,1079	0/0:30,0:30:87.28:0,87,1126	0/0:6,0:6:18.06:0,18,234
chr10	79716780	.	C	CT	5835.75	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=16.488;DP=768;FS=2.768;HRun=7;HaplotypeScore=106.2163;InbreedingCoeff=0.9983;MQ=79.72;MQ0=0;MQRankSum=-4.834;QD=29.03;ReadPosRankSum=1.084;VQSLOD=4.4067;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,37:40:99:1199,102,0	0/0:10,0:10:30.05:0,30,290	0/0:23,0:23:54.06:0,54,509	0/0:19,0:19:41.06:0,41,369	0/0:31,0:31:78.10:0,78,748	0/0:24,0:24:63.09:0,63,608	0/0:20,1:21:17.83:0,18,456	0/0:39,0:39:75.09:0,75,720	0/0:33,0:33:81.12:0,81,782	0/0:42,0:42:99:0,108,1035	0/0:18,0:18:51.07:0,51,487	1/1:3,24:27:66.12:764,66,0	1/1:3,31:34:90.25:1063,90,0	1/1:5,22:27:60.04:725,60,0	0/0:48,0:48:99:0,135,1304	0/0:37,0:37:99:0,102,973	0/0:24,0:24:69.11:0,69,666	0/0:17,0:17:48.07:0,48,463	0/0:23,0:23:51.05:0,51,485	0/0:41,0:41:99:0,111,1059	0/0:25,0:25:63.09:0,63,608	1/1:4,26:30:75.23:906,75,0	1/1:5,19:24:57.17:688,57,0	1/1:3,16:19:42.09:491,42,0	0/0:28,0:28:78.12:0,78,753	0/0:21,0:21:54.08:0,54,522	0/0:31,0:30:87.13:0,87,840	0/0:12,0:12:30.04:0,30,289
chr10	79717236	.	AC	A	4079.11	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.718;DP=617;FS=1.208;HRun=5;HaplotypeScore=73.5197;InbreedingCoeff=0.9981;MQ=84.63;MQ0=0;MQRankSum=-2.912;QD=29.77;ReadPosRankSum=2.534;VQSLOD=4.2994;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:30:69.19:782,69,0	0/0:16,0:16:48.15:0,48,640	0/0:19,0:19:48.16:0,48,654	0/0:22,0:22:59.98:0,60,781	0/0:34,0:34:99:0,99,1345	0/0:24,0:24:66.22:0,66,902	0/0:10,0:10:30.10:0,30,410	0/0:29,0:29:81.25:0,81,1076	0/0:25,0:25:75.24:0,75,1012	0/0:28,0:28:75.25:0,75,1026	0/0:17,0:17:51.17:0,51,698	1/1:0,19:19:57.16:646,57,0	1/1:1,18:19:51.14:576,51,0	1/1:2,29:31:81.23:918,81,0	0/0:17,0:17:48.15:0,48,640	0/0:31,0:31:90.30:0,90,1231	0/0:14,0:14:39.13:0,39,529	0/0:18,0:18:54.18:0,54,738	0/0:21,0:21:63.21:0,63,857	0/0:25,0:25:72.24:0,72,984	0/0:19,0:19:51.17:0,51,697	1/1:0,6:6:18.05:204,18,0	1/1:2,19:21:54.15:612,54,0	1/1:0,11:11:30.09:340,30,0	0/0:24,0:24:69.23:0,69,941	0/0:29,0:29:87.28:0,87,1175	0/0:47,0:47:99:0,141,1911	0/0:11,0:11:27.09:0,27,369
chr10	79717563	.	GAT	G	4723.40	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.157;DP=563;FS=2.921;HRun=0;HaplotypeScore=80.2458;InbreedingCoeff=0.9991;MQ=87.40;MQ0=0;MQRankSum=-1.758;QD=39.36;ReadPosRankSum=3.966;VQSLOD=7.1460;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:69.23:1016,69,0	0/0:15,0:15:45.10:0,45,774	0/0:21,0:22:60.99:0,61,1108	0/0:21,0:21:57.19:0,57,999	0/0:26,0:26:78.22:0,78,1340	0/0:21,0:21:60.21:0,60,1123	0/0:18,0:18:54.17:0,54,979	0/0:25,0:24:72.23:0,72,1283	0/0:11,0:11:30.09:0,30,531	0/0:22,0:22:63.21:0,63,1152	0/0:18,0:18:51.16:0,51,921	1/1:0,18:18:48.16:706,48,0	1/1:1,21:22:63.21:926,63,0	1/1:0,12:12:33.11:485,33,0	0/0:20,0:20:54.19:0,54,1011	0/0:21,0:21:63.22:0,63,1171	0/0:27,0:27:81.25:0,81,1465	0/0:27,0:27:81.28:0,81,1517	0/0:32,0:32:90.28:0,90,1605	0/0:31,0:31:90.31:0,90,1684	0/0:13,0:13:39.13:0,39,730	1/1:2,9:11:24.08:353,24,0	1/1:1,17:18:48.16:706,48,0	1/1:0,13:13:36.12:530,36,0	0/0:21,0:21:60.13:0,60,995	0/0:26,0:26:78.27:0,78,1461	0/0:18,0:18:54.19:0,54,1011	0/0:8,0:8:24.08:0,24,449
chr10	79717693	.	GTA	G	2330.96	PASS	AB=0.993;AC=18;AF=0.321;AN=56;BaseQRankSum=11.010;DP=731;FS=6.618;HRun=0;HaplotypeScore=114.2000;InbreedingCoeff=0.7181;MQ=59.94;MQ0=8;MQRankSum=-3.665;QD=9.21;ReadPosRankSum=-1.345;VQSLOD=2.4408;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,2:25:15.42:153,15,0	0/0:6,0:6:14.98:0,15,125	0/0:29,0:17:48.04:0,48,481	0/0:40,0:27:67.05:0,67,605	0/0:22,0:22:35.03:0,35,675	0/1:32,1:33:86.68:87,0,198	0/0:17,0:17:36.71:0,37,451	0/0:32,0:30:52.28:0,52,683	0/0:23,0:23:39.96:0,40,806	0/0:35,0:35:22.49:0,22,1025	0/0:24,0:24:16.84:0,17,475	1/1:12,4:16:32.71:243,33,0	1/1:19,6:25:60.20:445,60,0	1/1:17,4:21:41.15:280,41,0	0/0:35,0:35:75.03:0,75,1117	0/0:31,0:31:78.11:0,78,1244	0/1:29,0:29:1.94:2,0,595	0/0:22,0:21:18.11:0,18,554	0/0:23,0:20:41.26:0,41,533	0/0:20,0:20:49:0,49,674	0/0:53,0:52:45.12:0,45,920	1/1:13,6:18:44.58:330,45,0	1/1:22,6:28:65.58:481,66,0	1/1:31,3:34:62.70:496,63,0	0/0:31,0:31:70.89:0,71,629	0/0:35,0:34:64.60:0,65,1071	0/1:14,0:14:6.96:7,0,413	0/1:8,0:8:6.82:7,0,174
chr10	79717695	.	ATG	A	706.20	PASS	AB=0.950;AC=16;AF=0.308;AN=52;BaseQRankSum=5.765;DP=735;FS=0.599;HRun=0;HaplotypeScore=122.2172;InbreedingCoeff=0.0713;MQ=58.16;MQ0=9;MQRankSum=-0.494;QD=1.95;ReadPosRankSum=2.619;VQSLOD=2.2303;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:11.47:0,11,108	0/0:5,0:5:6.02:0,6,88	./.	./.	0/0:21,0:21:24.08:0,24,364	1/1:13,18:33:38.94:413,39,0	0/0:17,0:17:27.91:0,28,411	0/0:32,0:29:9.12:0,9,175	0/0:23,0:22:48.14:0,48,674	0/1:32,3:35:70.67:71,0,544	0/1:19,4:24:99:112,0,254	1/1:17,0:17:4.28:17,4,0	0/1:26,0:27:27.15:50,0,27	0/1:22,0:22:13.93:14,0,17	0/1:30,5:35:12.82:13,0,669	0/0:31,2:33:29.71:0,30,872	0/1:28,1:29:38.08:38,0,287	0/0:23,0:22:30.53:0,31,399	0/0:22,0:19:17.73:0,18,238	0/0:20,0:20:26.96:0,27,378	0/1:48,5:52:98.78:99,0,453	1/1:19,0:18:0.79:2,1,0	0/1:27,0:27:2.03:2,0,5	0/1:34,0:34:3.24:4,0,3	0/0:20,0:31:21.02:0,21,217	0/0:34,0:33:59.24:0,59,775	0/0:14,0:14:24.48:0,24,280	0/1:8,0:8:21.26:21,0,123
chr10	79717726	.	TGTGTGC	T	2483.06	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=14.351;DP=729;FS=12.380;HRun=0;HaplotypeScore=178.0053;InbreedingCoeff=0.8886;MQ=52.09;MQ0=16;MQRankSum=-3.288;QD=14.11;ReadPosRankSum=-4.358;VQSLOD=1.2953;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:32:29.59:205,0,30	0/0:3,0:3:9.03:0,9,210	0/0:37,0:16:34.36:0,34,430	0/0:30,0:14:28.39:0,28,396	0/0:16,0:16:45.03:0,45,1019	0/0:34,0:34:62.79:0,63,863	0/0:23,0:23:63.14:0,63,1305	0/0:30,0:28:59.92:0,60,994	0/0:26,0:25:57.46:0,57,1665	0/0:26,0:26:75.22:0,75,1812	0/0:26,0:26:68.63:0,69,1189	1/1:20,2:22:51.28:491,51,0	1/1:20,4:24:33.61:575,34,0	1/1:27,1:27:53.61:449,54,0	0/0:39,0:39:96.12:0,96,2230	0/0:35,0:35:93.23:0,93,2425	0/0:30,0:30:80.83:0,81,1276	0/0:24,0:23:58.50:0,59,1104	0/0:17,0:15:42.05:0,42,813	0/0:18,0:18:51.08:0,51,1174	0/0:53,0:51:99:0,118,2055	1/1:14,2:15:26.65:202,27,0	1/1:18,0:18:27.47:282,27,0	1/1:35,0:35:53.79:469,54,0	0/0:22,0:22:45.09:0,45,881	0/0:37,0:37:99:0,108,2223	0/0:17,0:17:51:0,51,1006	0/0:10,0:10:27.41:0,27,446
chr10	79717728	.	TGTGC	T	2120.56	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=14.048;DP=718;FS=12.064;HRun=0;HaplotypeScore=154.7946;InbreedingCoeff=0.8885;MQ=53.95;MQ0=16;MQRankSum=-3.086;QD=11.91;ReadPosRankSum=-2.751;VQSLOD=2.0667;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:31:33.69:214,0,34	0/0:3,0:3:9.03:0,9,178	0/0:36,0:17:37.25:0,37,390	0/0:31,0:16:34.37:0,34,443	0/0:14,0:14:39.05:0,39,789	0/0:32,0:32:30.15:0,30,494	0/0:22,0:22:63.01:0,63,1037	0/0:36,0:34:77.07:0,77,992	0/0:25,0:24:53.33:0,53,1345	0/0:25,0:25:75.17:0,75,1342	0/0:26,0:26:45.90:0,46,900	1/1:20,2:22:48.35:435,48,0	1/1:24,0:24:42.65:508,43,0	1/1:26,3:28:47.59:391,48,0	0/0:36,0:36:93.08:0,93,1706	0/0:34,0:34:93.19:0,93,1969	0/0:30,0:30:80.41:0,80,1039	0/0:24,0:23:53.25:0,53,902	0/0:16,0:14:39.04:0,39,652	0/0:17,0:17:45.07:0,45,904	0/0:52,0:50:99:0,115,1583	1/1:15,4:18:24.84:185,25,0	1/1:13,5:18:27.84:190,28,0	1/1:31,3:34:48.41:388,48,0	0/0:22,0:22:48.05:0,48,675	0/0:34,0:34:96.15:0,96,1784	0/0:15,0:15:45.03:0,45,800	0/0:10,0:10:26.77:0,27,367
chr10	79717731	.	GCT	G	125.77	PASS	AB=0.986;AC=8;AF=0.143;AN=56;BaseQRankSum=6.742;DP=681;FS=26.088;HRun=0;HaplotypeScore=132.9848;InbreedingCoeff=0.2452;MQ=56.44;MQ0=16;MQRankSum=-4.555;QD=0.94;ReadPosRankSum=-2.091;VQSLOD=0.4469;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:19.26:0,19,90	0/0:3,0:3:9.03:0,9,182	0/0:40,0:22:30.27:0,30,953	0/0:30,0:16:24.16:0,24,712	0/0:14,0:14:39.13:0,39,725	0/0:30,2:32:52.54:0,53,539	0/0:22,0:22:58.70:0,59,1105	0/0:33,0:32:64.82:0,65,1489	0/0:25,0:24:47.32:0,47,1141	0/0:23,0:23:41.24:0,41,1086	0/0:24,0:24:58.02:0,58,1015	1/1:20,0:20:0.53:12,1,0	1/1:19,0:20:4.23:138,4,0	0/1:27,0:26:11.97:12,0,73	0/0:36,0:36:99:0,99,1746	0/0:32,0:33:90.19:0,90,1651	0/0:27,1:28:65.45:0,65,1241	0/0:20,0:20:33.53:0,34,854	0/0:14,0:12:36.12:0,36,656	0/0:17,0:17:48.16:0,48,868	0/0:49,0:47:53.04:0,53,1744	0/1:16,1:16:20.58:29,0,21	0/1:16,0:16:22.12:48,0,22	0/1:34,0:34:10.85:11,0,25	0/0:17,0:17:42.06:0,42,653	0/0:32,0:32:95.13:0,95,1736	0/0:17,0:17:35.01:0,35,834	0/0:9,0:9:9.85:0,10,362
chr10	79718586	.	G	GCT	9496.19	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=16.635;DP=797;FS=9.038;HRun=0;HaplotypeScore=107.6126;InbreedingCoeff=0.9999;MQ=92.27;MQ0=1;MQRankSum=-4.147;QD=45.44;ReadPosRankSum=2.012;VQSLOD=5.7789;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,45:48:99:2232,126,0	0/0:18,0:18:54.18:0,54,756	0/0:29,0:29:75.18:0,75,997	0/0:38,0:39:61.51:0,62,1274	0/0:35,0:35:90.29:0,90,1245	0/0:29,0:29:84.26:0,84,1158	0/0:22,0:22:60.17:0,60,805	0/0:38,0:38:99:0,102,1428	0/0:29,0:29:84.28:0,84,1176	0/0:37,0:37:99:0,99,1339	0/0:22,0:22:66.22:0,66,923	1/1:2,30:32:87.29:1566,87,0	1/1:8,23:31:83.55:1369,84,0	1/1:4,22:27:69.24:1237,69,0	0/0:27,0:27:72.24:0,72,1007	0/0:31,0:31:90.28:0,90,1228	0/0:31,0:31:90.30:0,90,1260	0/0:14,0:14:42.12:0,42,567	0/0:27,0:27:69.23:0,69,967	0/0:26,0:26:75.24:0,75,1035	0/0:47,0:47:99:0,132,1782	1/1:1,20:21:51.09:856,51,0	1/1:3,21:24:66.23:1187,66,0	1/1:4,21:25:59.91:1050,60,0	0/0:18,0:18:54.17:0,54,726	0/0:25,0:25:75.25:0,75,1050	0/0:32,0:31:90.28:0,90,1241	0/0:12,0:12:33.11:0,33,462
chr10	79718681	.	T	TTC	8289.02	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.824;DP=699;FS=2.810;HRun=0;HaplotypeScore=98.5404;InbreedingCoeff=0.9992;MQ=84.25;MQ0=0;MQRankSum=-2.952;QD=46.57;ReadPosRankSum=2.801;VQSLOD=6.2057;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:41:99:1975,111,0	0/0:15,0:15:42.14:0,42,617	0/0:19,0:19:54.16:0,54,720	0/0:24,0:24:47.41:0,47,649	0/0:29,0:29:84.23:0,84,1194	0/0:15,0:15:45.15:0,45,662	0/0:22,0:22:65.38:0,65,851	0/0:35,0:35:99:0,102,1468	0/0:22,0:22:63.20:0,63,907	0/0:25,0:25:66.22:0,66,971	0/0:19,0:19:54.12:0,54,703	1/1:4,16:20:60.18:1001,60,0	1/1:1,27:28:72.24:1256,72,0	1/1:3,21:24:66.22:1184,66,0	0/0:29,0:29:84.27:0,84,1193	0/0:35,0:35:99:0,102,1439	0/0:33,0:33:96.28:0,96,1336	0/0:17,0:17:51.17:0,51,749	0/0:29,0:29:81.27:0,81,1192	0/0:24,0:24:71.43:0,71,987	0/0:33,0:33:99:0,99,1438	1/1:2,17:19:51.09:878,51,0	1/1:2,19:21:52.06:881,52,0	1/1:2,23:25:63.21:1114,63,0	0/0:27,0:27:78.22:0,78,1091	0/0:34,0:34:96.29:0,96,1329	0/0:27,0:27:81.26:0,81,1174	0/0:8,0:8:21.07:0,21,309
chr10	79718918	.	T	TA	8087.96	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=7.584;DP=685;FS=1.745;HRun=5;HaplotypeScore=87.2926;InbreedingCoeff=0.9975;MQ=86.26;MQ0=0;MQRankSum=-2.308;QD=35.17;ReadPosRankSum=3.386;VQSLOD=4.5451;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,37:39:99:1382,105,0	0/0:15,0:15:39.10:0,39,419	0/0:30,0:30:62.63:0,63,614	0/0:22,0:22:44.18:0,44,466	0/0:38,0:38:99:0,102,1088	0/0:21,0:21:57.14:0,57,613	0/0:18,0:18:48.12:0,48,516	0/0:30,0:30:87.19:0,87,919	0/0:15,0:15:42.11:0,42,451	0/0:34,0:34:81.10:0,81,870	0/0:23,0:23:66.16:0,66,709	1/1:1,22:23:66.21:868,66,0	1/1:2,27:29:78.25:1025,78,0	1/1:2,21:23:57.19:750,57,0	0/0:28,0:28:75.19:0,75,806	0/0:31,0:31:90.20:0,90,957	0/0:28,0:28:75.19:0,75,806	1/1:1,12:13:30.10:395,30,0	0/0:19,0:19:54.11:0,54,571	0/0:39,0:39:99:0,114,1216	0/0:15,0:15:42.11:0,42,451	1/1:1,25:26:69.18:888,69,0	1/1:0,25:25:72.23:934,72,0	1/1:2,14:16:42.14:553,42,0	0/0:21,0:21:60.15:0,60,644	1/1:1,29:30:58.02:1097,58,0	0/0:28,0:28:75.11:0,75,778	1/1:0,6:6:15.05:197,15,0
chr10	79720382	.	GT	G	720.59	PASS	AB=0.917;AC=15;AF=0.268;AN=56;BaseQRankSum=13.400;DP=514;FS=0.467;HRun=1;HaplotypeScore=77.7237;InbreedingCoeff=0.8600;MQ=74.29;MQ0=0;MQRankSum=-11.689;QD=8.28;ReadPosRankSum=0.535;VQSLOD=0.7480;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,5:7:14.25:105,14,0	0/0:15,0:15:45.15:0,45,713	0/1:10,1:11:7.59:8,0,353	0/0:13,0:13:0.16:0,0,396	0/0:23,0:23:69.22:0,69,1080	0/0:21,0:21:63.20:0,63,984	0/0:20,0:20:60.20:0,60,956	0/0:35,0:35:99:0,105,1627	0/0:17,0:17:51.17:0,51,810	0/0:21,0:21:63.21:0,63,988	0/0:30,0:30:90.31:0,90,1439	1/1:0,12:12:31.02:192,31,0	1/1:0,16:16:41.08:188,41,0	1/1:1,8:9:24.46:133,24,0	0/0:12,0:12:36.12:0,36,576	0/0:17,0:17:51.17:0,51,815	0/0:26,0:26:72.21:0,72,1124	0/0:19,0:19:57.19:0,57,902	0/0:25,0:25:75.26:0,75,1187	0/0:33,0:33:96.33:0,96,1535	0/0:7,0:7:21.07:0,21,336	1/1:0,11:11:28.14:111,28,0	1/1:0,14:17:34.77:149,35,0	1/1:0,4:4:7.49:28,7,0	0/0:32,0:32:96.30:0,96,1507	0/0:15,0:15:45.14:0,45,699	0/0:36,0:36:99:0,108,1724	0/0:10,0:10:23.82:0,24,383
chr10	79720385	.	C	CA	562.51	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.906;DP=523;FS=2.230;HRun=1;HaplotypeScore=80.6033;InbreedingCoeff=0.9798;MQ=74.15;MQ0=0;MQRankSum=-13.051;QD=7.40;ReadPosRankSum=1.071;VQSLOD=0.9407;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,5:7:13.60:59,14,0	0/0:17,0:17:48.12:0,48,592	0/0:12,0:12:31.32:0,31,364	0/0:13,0:13:34.84:0,35,351	0/0:23,0:23:69.22:0,69,895	0/0:19,0:19:57.19:0,57,740	0/0:19,0:19:57.17:0,57,725	0/0:39,0:39:99:0,111,1383	0/0:18,0:18:51.15:0,51,648	0/0:21,0:21:63.19:0,63,797	0/0:32,0:32:96.28:0,96,1205	1/1:3,9:12:27.58:126,28,0	1/1:0,16:16:40.72:178,41,0	1/1:0,8:8:21.48:90,21,0	0/0:13,0:13:36.12:0,36,467	0/0:17,0:17:51.17:0,51,662	0/0:25,0:25:69.20:0,69,879	0/0:19,0:19:54.16:0,54,687	0/0:25,0:25:72.23:0,72,935	0/0:34,0:34:93.29:0,93,1192	0/0:6,0:6:18.06:0,18,234	1/1:0,11:11:28.56:112,29,0	1/1:4,14:18:37.61:164,38,0	1/1:0,4:4:7.96:29,8,0	0/0:35,0:35:93.28:0,93,1191	0/0:14,0:14:42.14:0,42,545	0/0:36,0:36:99:0,108,1359	0/0:10,0:10:24.04:0,24,293
chr10	79721051	.	CA	C	74.34	PASS	AB=0.897;AC=7;AF=0.125;AN=56;BaseQRankSum=12.964;DP=987;FS=8.061;HRun=3;HaplotypeScore=175.3231;InbreedingCoeff=0.1745;MQ=64.04;MQ0=13;MQRankSum=-0.702;QD=0.52;ReadPosRankSum=3.148;VQSLOD=-0.4062;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,2:8:15.05:0,15,214	0/0:14,0:14:42.14:0,42,601	0/0:94,0:36:85.61:0,86,1022	0/0:91,0:46:55.25:0,55,1136	0/0:43,0:43:99:0,123,1724	0/0:34,0:34:96.31:0,96,1360	0/0:46,0:45:99:0,126,1775	0/0:31,0:30:78.22:0,78,1044	0/0:42,0:42:99:0,126,1748	0/0:47,0:47:99:0,141,2007	0/0:31,0:31:93.30:0,93,1321	0/0:14,1:15:9.37:0,9,380	0/1:12,2:14:8.04:8,0,315	0/0:9,2:11:20.98:0,21,255	0/0:46,0:46:99:0,135,1940	0/0:58,0:58:99:0,169,2386	0/0:45,0:45:99:0,129,1757	0/1:40,0:40:11.36:11,0,25	0/0:28,0:27:75.25:0,75,1061	0/0:37,0:37:99:0,108,1551	0/0:41,0:41:99:0,104,1535	0/1:8,3:10:69.98:70,0,213	0/1:15,4:19:83.68:84,0,346	0/0:12,5:17:17.95:0,18,214	0/0:26,0:26:69.23:0,69,978	0/1:43,0:42:1.12:1,0,140	0/0:38,0:38:99:0,114,1628	1/1:17,0:17:7.96:18,8,0
chr10	79721053	.	AAC	A	3151.48	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.936;DP=988;FS=2.412;HRun=0;HaplotypeScore=185.0485;InbreedingCoeff=0.9873;MQ=63.37;MQ0=15;MQRankSum=0.716;QD=31.83;ReadPosRankSum=1.945;VQSLOD=4.4846;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:24.07:0,24,310	0/0:14,0:14:42.14:0,42,753	0/0:95,0:36:64.80:0,65,1029	0/0:90,0:45:57.14:0,57,1151	0/0:43,0:43:99:0,123,2193	0/0:33,0:33:93.30:0,93,1645	0/0:44,0:43:99:0,129,2268	0/0:30,0:29:83.75:0,84,1387	0/0:42,0:42:99:0,120,2133	0/0:47,0:47:99:0,135,2406	0/0:31,0:31:93.32:0,93,1678	0/0:14,0:14:41.31:0,41,555	0/0:13,0:13:17.67:0,18,277	0/0:9,0:9:21.06:0,21,274	0/0:45,0:45:99:0,135,2446	0/0:59,0:59:99:0,172,2971	0/0:46,0:46:99:0,112,2070	1/1:3,37:40:86.50:1210,87,0	0/0:28,0:27:81.25:0,81,1365	0/0:37,0:37:99:0,111,1977	0/0:42,0:42:99:0,108,2032	0/0:12,0:11:26.13:0,26,315	0/0:21,0:21:50.28:0,50,549	0/0:17,0:17:21.37:0,21,310	0/0:25,0:25:69.23:0,69,1195	1/1:4,38:41:15.09:1395,15,0	0/0:39,0:39:99:0,111,1968	1/1:0,17:17:48.16:687,48,0
chr10	79721060	.	CACACAGACACAAACACAACAT	C	6517.30	PASS	AB=0.944;AC=12;AF=0.214;AN=56;BaseQRankSum=12.235;DP=982;FS=128.785;HRun=0;HaplotypeScore=515.8667;InbreedingCoeff=0.8372;MQ=63.65;MQ0=17;MQRankSum=-12.475;QD=67.89;ReadPosRankSum=-2.873;VQSLOD=1.3758;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:20.99:497,21,0	0/0:15,0:15:36.12:0,36,2606	0/0:91,0:38:66.05:0,66,2653	0/0:91,0:43:78.28:0,78,2704	0/0:43,0:43:99:0,126,6972	0/0:32,0:32:90.27:0,90,5003	0/0:45,0:44:99:0,126,7383	0/0:34,0:33:89.48:0,89,4000	0/0:45,0:45:99:0,129,8545	0/0:44,0:44:99:0,114,7321	0/0:29,0:29:87.30:0,87,6183	1/1:13,1:16:42.08:1320,42,0	1/1:10,3:13:27.50:888,27,0	0/1:7,1:8:11.57:434,0,12	0/0:48,0:48:99:0,123,8771	0/0:58,0:58:99:0,160,11561	0/0:44,0:44:99:0,104,7962	0/0:39,0:39:91.33:0,91,6006	0/0:29,0:28:72.24:0,72,3935	0/0:35,0:35:90.26:0,90,6181	0/0:45,0:45:96.44:0,96,7590	1/1:9,1:10:14.13:1031,14,0	1/1:18,4:21:56.86:1629,57,0	0/1:15,0:15:1.61:718,0,2	0/0:22,0:22:57.20:0,57,3321	0/0:41,0:40:99:0,114,6500	0/0:37,0:37:99:0,108,7383	0/0:17,0:17:48.16:0,48,3134
chr10	79721065	.	A	AC	1004.11	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.742;DP=946;FS=119.834;HRun=1;HaplotypeScore=178.5159;InbreedingCoeff=0.9635;MQ=63.55;MQ0=15;MQRankSum=-11.341;QD=11.41;ReadPosRankSum=-0.945;VQSLOD=0.0994;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,1:11:13.92:88,14,0	0/0:13,0:13:39.10:0,39,525	0/0:80,0:35:76.35:0,76,1011	0/0:79,0:39:67.44:0,67,946	0/0:42,0:42:99:0,123,1683	0/0:31,0:31:93.28:0,93,1262	0/0:45,0:44:99:0,126,1759	0/0:33,0:32:96.29:0,96,1315	0/0:43,0:43:99:0,129,1782	0/0:42,0:42:99:0,120,1674	0/0:31,0:31:93.31:0,93,1299	1/1:11,4:15:28.16:268,28,0	1/1:9,1:10:11.75:80,12,0	1/1:4,1:5:11.18:77,11,0	0/0:46,0:46:99:0,135,1880	0/0:54,0:54:99:0,163,2247	0/0:46,0:46:99:0,125,1695	0/0:37,0:37:91.47:0,91,1216	0/0:30,0:29:84.26:0,84,1141	0/0:35,0:35:99:0,105,1369	0/0:43,0:44:99:0,113,1614	1/1:6,5:10:28.59:219,29,0	1/1:14,7:21:36.63:277,37,0	1/1:8,6:14:6:186,6,0	0/0:23,0:23:63.20:0,63,863	0/0:40,0:39:99:0,114,1565	0/0:38,0:38:99:0,111,1535	0/0:17,0:17:48.16:0,48,667
chr10	79721066	.	G	GC	1583.11	PASS	AB=0.688;AC=13;AF=0.232;AN=56;BaseQRankSum=12.911;DP=957;FS=125.560;HRun=0;HaplotypeScore=185.5950;InbreedingCoeff=0.9166;MQ=62.74;MQ0=15;MQRankSum=-11.962;QD=16.32;ReadPosRankSum=-1.389;VQSLOD=-0.2691;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,8:12:16.59:218,17,0	0/0:14,0:13:39.13:0,39,544	0/0:81,0:36:53.51:0,54,1037	0/0:85,0:39:77:0,77,927	0/0:40,0:40:99:0,117,1614	0/0:29,0:29:87.29:0,87,1213	0/0:46,0:45:99:0,129,1765	0/0:34,0:33:96.29:0,96,1317	0/0:42,0:42:99:0,126,1761	0/0:42,0:42:99:0,123,1688	0/0:31,0:31:93.31:0,93,1300	1/1:11,5:16:12.64:289,13,0	0/1:6,5:11:3.02:146,0,3	1/1:3,2:6:11.38:128,11,0	0/0:46,0:46:99:0,135,1870	0/0:54,0:54:99:0,163,2263	0/0:46,0:46:99:0,125,1681	0/0:37,0:37:91.43:0,91,1217	0/0:31,0:30:84.27:0,84,1152	0/0:34,0:34:99:0,99,1380	0/0:46,0:46:99:0,113,1612	1/1:11,3:13:30.36:274,30,0	1/1:14,9:22:38.08:449,38,0	1/1:8,6:15:14.99:265,15,0	0/0:23,0:23:63.21:0,63,880	0/0:41,0:40:99:0,117,1596	0/0:38,0:38:99:0,111,1551	0/0:17,0:17:48.15:0,48,657
chr10	79721079	.	CAT	C	2051.77	PASS	AB=0.667;AC=11;AF=0.196;AN=56;BaseQRankSum=12.753;DP=951;FS=90.014;HRun=0;HaplotypeScore=198.6321;InbreedingCoeff=0.6525;MQ=64.42;MQ0=12;MQRankSum=-12.037;QD=22.55;ReadPosRankSum=-0.775;VQSLOD=0.5191;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,10:12:19.80:405,20,0	0/0:14,0:13:36.11:0,36,662	0/0:71,0:36:93.75:0,94,1297	0/0:80,2:41:89.19:0,89,1365	0/0:35,0:35:99:0,102,1776	0/0:24,0:24:69.21:0,69,1262	0/0:48,0:47:99:0,138,2269	0/0:40,0:40:99:0,120,2185	0/0:46,0:46:99:0,138,2470	0/0:42,0:42:99:0,120,2231	0/0:30,0:30:84.26:0,84,1541	1/1:6,6:12:15.90:364,16,0	1/1:4,7:11:24.83:337,25,0	0/1:3,3:6:42.57:119,0,43	0/0:49,0:49:99:0,144,2588	0/0:55,0:55:99:0,166,3070	0/0:48,0:48:99:0,125,2598	0/0:44,0:44:83:0,83,1772	0/0:33,0:31:93.28:0,93,1706	0/0:34,0:34:99:0,102,1932	0/0:48,1:49:99:0,127,2472	0/1:8,7:14:47.78:247,0,48	1/1:11,9:19:15.87:538,16,0	0/1:7,8:15:23.41:212,0,23	0/0:23,0:23:60.19:0,60,1112	0/0:44,0:43:99:0,129,2349	0/0:32,0:32:93.32:0,93,1772	0/0:16,0:16:44.99:0,45,732
chr10	79721105	.	A	AAC	3892.01	PASS	AB=0.622;AC=12;AF=0.214;AN=56;BaseQRankSum=15.152;DP=935;FS=125.509;HRun=0;HaplotypeScore=220.9126;InbreedingCoeff=0.7861;MQ=68.66;MQ0=9;MQRankSum=-13.454;QD=33.55;ReadPosRankSum=-2.131;VQSLOD=-0.3339;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,12:16:36.12:595,36,0	0/0:16,0:15:36.09:0,36,450	0/0:70,0:35:72.72:0,73,769	0/0:68,0:40:32.85:0,33,576	0/0:30,0:30:69.22:0,69,895	0/0:18,0:18:42.11:0,42,517	0/0:40,0:40:99:0,108,1324	0/0:50,0:50:99:0,123,1598	0/0:39,0:39:99:0,105,1333	0/0:39,0:39:99:0,99,1269	0/0:22,0:22:48.16:0,48,623	1/1:2,12:14:38.87:612,39,0	1/1:1,16:17:48.16:759,48,0	1/1:5,9:14:33.89:526,34,0	0/0:45,0:46:99:0,120,1560	0/0:62,0:62:99:0,160,2065	0/0:42,0:42:99:0,114,1439	0/0:40,0:41:76.80:0,77,954	0/0:35,0:35:84.27:0,84,1092	0/0:31,0:31:87.28:0,87,1131	0/0:55,0:57:99:0,100,1664	0/1:6,9:14:83.77:312,0,84	0/1:10,15:25:99:749,0,100	1/1:7,7:14:21.50:339,22,0	0/0:32,0:34:81.77:0,82,1122	0/0:37,0:36:99:0,99,1287	0/0:33,0:33:84.27:0,84,1091	0/0:9,0:9:21.07:0,21,273
chr10	79721130	.	ACT	A	598.28	PASS	AB=0.967;AC=10;AF=0.179;AN=56;BaseQRankSum=15.186;DP=887;FS=112.821;HRun=0;HaplotypeScore=224.0592;InbreedingCoeff=0.5288;MQ=66.86;MQ0=9;MQRankSum=-12.499;QD=5.34;ReadPosRankSum=1.046;VQSLOD=-0.2573;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:27.54:40,0,28	0/0:20,0:19:57.17:0,57,1053	0/0:54,0:37:33.21:0,33,1306	0/0:60,0:43:74.53:0,75,1418	0/0:23,0:23:69.24:0,69,1327	0/0:18,0:18:54.19:0,54,1042	0/0:39,0:39:99:0,114,2121	0/0:45,0:44:99:0,123,2286	0/0:36,0:36:99:0,108,2060	0/0:44,0:44:99:0,132,2492	0/0:15,0:15:45.09:0,45,829	0/1:16,0:16:0.50:78,0,0	1/1:15,0:15:12.85:96,13,0	1/1:18,0:18:3.02:92,3,0	0/0:52,0:52:99:0,153,2885	0/0:52,0:52:99:0,157,2976	0/0:39,0:39:99:0,102,2110	0/0:32,0:32:77.96:0,78,1355	0/0:37,0:37:99:0,108,2010	0/0:30,0:30:90.31:0,90,1712	0/0:63,1:64:90.26:0,90,3161	1/1:11,3:13:24.66:188,25,0	0/1:22,4:25:21.34:231,0,21	0/1:10,0:10:23.77:26,0,24	0/0:34,0:34:99:0,102,1962	0/0:37,0:36:99:0,105,1996	0/0:30,0:30:90.29:0,90,1678	0/0:11,0:11:30.10:0,30,577
chr10	79721137	.	CAAT	C	1914.73	PASS	AB=0.980;AC=12;AF=0.214;AN=56;BaseQRankSum=14.749;DP=898;FS=125.907;HRun=0;HaplotypeScore=229.8779;InbreedingCoeff=0.7820;MQ=66.85;MQ0=8;MQRankSum=-12.532;QD=17.89;ReadPosRankSum=2.013;VQSLOD=0.7382;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:24.05:247,24,0	0/0:20,0:19:57.20:0,57,1347	0/0:51,1:38:72.79:0,73,1793	0/0:62,0:41:33.72:0,34,1522	0/0:27,0:27:78.27:0,78,1752	0/0:20,0:20:57.19:0,57,1290	0/0:41,0:41:99:0,123,2807	0/0:41,0:40:99:0,114,2535	0/0:38,0:38:99:0,114,2621	0/0:49,0:49:99:0,144,3366	0/0:16,0:16:48.16:0,48,1069	1/1:15,0:15:39.09:400,39,0	1/1:15,0:15:34.80:395,35,0	1/1:18,0:18:37.05:421,37,0	0/0:50,0:50:99:0,147,3393	0/0:50,0:50:99:0,151,3458	0/0:38,1:39:61.82:0,62,2498	0/0:30,1:31:65.87:0,66,1549	0/0:39,0:39:99:0,114,2584	0/0:28,0:28:81.28:0,81,1906	0/0:68,1:69:99:0,131,4485	0/1:12,0:11:34.13:190,0,34	0/1:23,0:23:16.54:339,0,17	1/1:10,0:10:11.52:104,12,0	0/0:41,0:41:99:0,123,2827	0/0:38,0:37:99:0,108,2498	0/0:29,0:29:78.25:0,78,1796	0/0:10,0:10:30.10:0,30,608
chr10	79721138	.	AAT	A	1650.17	PASS	AB=0.624;AC=12;AF=0.214;AN=56;BaseQRankSum=14.374;DP=886;FS=140.524;HRun=0;HaplotypeScore=212.9993;InbreedingCoeff=0.7834;MQ=67.08;MQ0=7;MQRankSum=-13.603;QD=15.42;ReadPosRankSum=2.738;VQSLOD=0.6049;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,10:13:24.03:224,24,0	0/0:20,0:19:57.20:0,57,1101	0/0:51,1:39:89.24:0,89,1503	0/0:58,0:39:60.79:0,61,1205	0/0:27,0:27:78.25:0,78,1469	0/0:20,0:20:60.17:0,60,1085	0/0:41,0:41:99:0,123,2318	0/0:39,0:38:99:0,111,2120	0/0:38,0:38:99:0,111,2130	0/0:48,0:48:99:0,144,2736	0/0:16,0:16:45.14:0,45,836	1/1:2,13:15:39.04:363,39,0	1/1:2,13:15:41.98:376,42,0	1/1:3,15:18:22.27:359,22,0	0/0:49,0:49:99:0,144,2737	0/0:50,0:50:99:0,151,2850	0/0:39,0:39:97.30:0,97,2062	0/0:30,0:30:75.24:0,75,1375	0/0:39,0:39:99:0,117,2160	0/0:29,0:29:87.30:0,87,1654	0/0:68,0:69:99:0,185,3781	0/1:4,8:11:43.07:160,0,43	0/1:11,13:23:11.99:265,0,12	1/1:4,6:10:10.25:82,10,0	0/0:41,0:41:99:0,123,2332	0/0:36,0:36:99:0,108,2076	0/0:26,0:26:75.26:0,75,1448	0/0:10,0:10:30.06:0,30,473
chr10	79721142	.	CA	C	1430.98	PASS	AB=0.614;AC=12;AF=0.214;AN=56;BaseQRankSum=15.108;DP=907;FS=157.096;HRun=2;HaplotypeScore=204.0367;InbreedingCoeff=0.8002;MQ=67.23;MQ0=6;MQRankSum=-13.940;QD=13.25;ReadPosRankSum=1.072;VQSLOD=-0.5385;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,10:13:26.68:187,27,0	0/0:20,0:19:57.19:0,57,849	0/0:53,1:38:88.33:0,88,1268	0/0:55,3:39:51.96:0,52,1007	0/0:29,0:29:78.26:0,78,1148	0/0:20,0:20:57.16:0,57,830	0/0:40,0:40:99:0,117,1705	0/0:40,0:40:99:0,120,1714	0/0:38,0:38:99:0,114,1668	0/0:51,0:51:99:0,154,2260	0/0:16,0:16:48.15:0,48,683	1/1:3,13:16:44.48:308,44,0	1/1:2,13:15:41.47:288,41,0	1/1:4,15:19:53.22:372,53,0	0/0:52,0:52:99:0,156,2293	0/0:51,0:51:99:0,147,2138	0/0:40,0:40:99:0,114,1669	0/0:31,0:31:74.74:0,75,1078	0/0:37,0:37:99:0,111,1659	0/0:32,0:32:96.29:0,96,1367	0/0:72,0:72:99:0,168,2959	0/1:4,8:12:45.53:147,0,46	0/1:9,13:21:7.22:223,0,7	1/1:5,6:11:12.67:86,13,0	0/0:41,0:41:99:0,123,1797	0/0:38,0:38:99:0,114,1660	0/0:26,0:26:78.24:0,78,1129	0/0:10,0:10:27.09:0,27,404
chr10	79721149	.	C	CAG	1959.84	PASS	AB=0.938;AC=13;AF=0.232;AN=56;BaseQRankSum=15.172;DP=912;FS=136.953;HRun=0;HaplotypeScore=223.2289;InbreedingCoeff=0.8958;MQ=66.72;MQ0=6;MQRankSum=-13.445;QD=18.15;ReadPosRankSum=0.156;VQSLOD=0.3822;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,1:11:26.91:237,27,0	0/0:20,0:19:57.18:0,57,849	0/0:60,0:40:88.22:0,88,1101	0/0:61,0:39:84.65:0,85,1071	0/0:31,0:31:90.23:0,90,1265	0/0:20,0:20:57.19:0,57,866	0/0:40,0:40:99:0,120,1725	0/0:34,0:33:99:0,99,1415	0/0:38,0:38:99:0,105,1557	0/0:53,0:53:99:0,157,2315	0/0:16,0:16:48.16:0,48,731	1/1:14,2:16:44.81:408,45,0	1/1:16,1:17:47.68:389,48,0	1/1:18,2:20:53.58:519,54,0	0/0:56,0:56:99:0,165,2409	0/0:47,0:47:99:0,135,1958	0/0:38,0:38:99:0,111,1561	0/0:32,0:32:77.93:0,78,1088	0/0:38,0:38:99:0,105,1530	0/0:30,0:30:90.26:0,90,1309	0/0:80,0:79:99:0,209,3002	0/1:14,1:15:14.11:173,0,14	1/1:20,2:22:19.79:307,20,0	1/1:6,1:7:11.88:115,12,0	0/0:38,0:38:99:0,111,1693	0/0:36,0:36:99:0,102,1500	0/0:27,0:27:78.25:0,78,1167	0/0:9,0:9:27.09:0,27,412
chr10	79721174	.	ACG	A	1253	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.897;DP=933;FS=95.397;HRun=0;HaplotypeScore=224.1731;InbreedingCoeff=0.9533;MQ=62.71;MQ0=5;MQRankSum=-12.066;QD=14.08;ReadPosRankSum=-0.071;VQSLOD=0.2576;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,1:6:11.83:82,12,0	0/0:19,0:19:54.19:0,54,1021	0/0:54,0:35:89.58:0,90,1540	0/0:57,1:38:52.62:0,53,1219	0/0:37,0:37:99:0,108,2028	0/0:25,0:25:72.23:0,72,1347	0/0:37,0:37:99:0,108,1896	0/0:43,0:43:99:0,126,2181	0/0:45,0:45:99:0,117,2185	0/0:56,0:56:99:0,164,3033	0/0:24,0:24:72.17:0,72,1275	1/1:8,5:13:32.59:252,33,0	1/1:6,7:13:26.86:232,27,0	1/1:13,6:18:31.27:249,31,0	0/0:64,0:64:99:0,193,3582	0/0:54,0:54:99:0,160,2946	0/0:39,0:39:91.05:0,91,1918	0/0:34,0:34:71.79:0,72,1673	0/0:31,0:31:87.22:0,87,1563	0/0:30,0:30:90.24:0,90,1681	0/0:84,0:83:99:0,230,4207	1/1:4,8:12:25.22:223,25,0	1/1:10,10:20:47.03:369,47,0	1/1:5,1:6:1.56:36,2,0	0/0:38,0:38:99:0,111,1869	0/0:34,0:34:99:0,99,1780	0/0:27,0:27:81.26:0,81,1514	0/0:11,0:11:33.11:0,33,635
chr10	79721179	.	C	CAT	2438.10	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.012;DP=943;FS=108.990;HRun=0;HaplotypeScore=226.6644;InbreedingCoeff=0.9466;MQ=62.44;MQ0=6;MQRankSum=-12.746;QD=28.68;ReadPosRankSum=-2.135;VQSLOD=0.0384;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,3:6:12.04:154,12,0	0/0:21,0:21:60.17:0,60,853	0/0:58,0:36:89.07:0,89,1236	0/0:58,0:37:58.86:0,59,1128	0/0:38,0:38:99:0,114,1665	0/0:25,0:25:72.23:0,72,1081	0/0:39,0:39:99:0,105,1530	0/0:43,0:43:99:0,117,1740	0/0:40,0:40:99:0,114,1717	0/0:54,0:54:99:0,163,2423	0/0:23,0:23:69.22:0,69,1032	1/1:7,6:13:36.03:458,36,0	1/1:11,2:13:27.08:386,27,0	1/1:9,10:18:51:623,51,0	0/0:66,0:66:99:0,196,2903	0/0:56,0:56:99:0,165,2347	0/0:39,0:39:99:0,111,1572	0/0:34,0:34:94.60:0,95,1361	0/0:30,0:30:90.16:0,90,1286	0/0:29,0:29:87.28:0,87,1301	0/0:96,0:95:99:0,236,3531	1/1:9,2:11:29.96:364,30,0	1/1:12,6:18:48.15:608,48,0	1/1:2,3:5:0.28:35,0,0	0/0:33,0:33:93.31:0,93,1397	0/0:34,0:34:99:0,99,1454	0/0:28,0:28:81.24:0,81,1194	0/0:14,0:14:33.11:0,33,504
chr10	79721188	.	AGC	A	672.43	PASS	AB=0.757;AC=12;AF=0.214;AN=56;BaseQRankSum=10.677;DP=927;FS=41.232;HRun=0;HaplotypeScore=215.3563;InbreedingCoeff=0.8034;MQ=61.79;MQ0=5;MQRankSum=-9.245;QD=9.75;ReadPosRankSum=3.543;VQSLOD=1.8854;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:4:3:27,3,0	0/0:20,0:20:54.17:0,54,1048	0/0:56,0:30:77.83:0,78,1297	0/0:58,0:39:82.92:0,83,1483	0/0:39,0:39:99:0,114,2196	0/0:25,0:25:75.24:0,75,1474	0/0:41,0:41:99:0,119,2371	0/0:45,0:45:99:0,135,2565	0/0:46,0:46:99:0,132,2609	0/0:48,0:48:99:0,144,2793	0/0:27,0:27:81.26:0,81,1573	1/1:6,5:11:15.01:135,15,0	1/1:2,7:9:20.96:175,21,0	0/1:9,6:14:14.45:87,0,14	0/0:63,0:63:99:0,187,3581	0/0:55,0:55:99:0,156,2995	0/0:38,0:39:99:0,113,2291	0/0:33,1:34:92.21:0,92,1836	0/0:29,0:29:87.24:0,87,1548	0/0:26,0:26:78.27:0,78,1581	0/0:93,0:92:99:0,249,5099	1/1:2,8:10:21.01:187,21,0	1/1:6,10:16:24.01:213,24,0	0/1:3,1:4:0.35:21,0,0	0/0:32,0:32:90.29:0,90,1763	0/0:40,0:40:99:0,114,2171	0/0:25,0:25:75.21:0,75,1420	0/0:14,0:14:39.13:0,39,790
chr10	79721244	.	CA	C	1435.71	PASS	AB=0.570;AC=8;AF=0.148;AN=54;BaseQRankSum=12.879;DP=1051;FS=1.003;HRun=3;HaplotypeScore=284.4299;InbreedingCoeff=0.3612;MQ=71.26;MQ0=13;MQRankSum=-10.838;QD=17.30;ReadPosRankSum=-0.827;VQSLOD=2.0370;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:3.01:37,3,0	0/0:12,0:12:30.10:0,30,423	0/0:83,0:33:57.56:0,58,778	0/0:95,0:41:56.60:0,57,959	0/0:35,0:35:99:0,105,1481	0/0:27,0:27:78.24:0,78,1080	0/0:40,0:40:99:0,108,1525	0/0:52,0:52:99:0,147,2040	0/0:57,0:57:99:0,163,2366	0/0:52,0:52:99:0,144,2038	0/0:29,0:28:87.29:0,87,1245	1/1:1,8:8:18.15:166,18,0	0/1:4,11:12:9.35:228,0,9	0/1:2,5:5:29.43:68,0,29	0/0:66,0:66:99:0,193,2724	0/0:67,0:67:99:0,199,2793	0/0:47,0:47:99:0,141,2021	0/0:34,0:34:96.29:0,96,1345	0/0:31,0:31:87.23:0,87,1200	0/0:45,0:45:99:0,135,1930	0/0:104,0:104:99:0,292,4022	0/1:5,27:32:55.42:675,0,55	0/1:5,14:19:31.26:400,0,31	./.	0/0:23,0:23:66.22:0,66,938	0/0:34,0:34:99:0,99,1403	0/0:24,0:24:69.23:0,69,972	0/0:11,0:11:30.10:0,30,429
chr10	79721258	.	AC	A	1298.85	PASS	AB=0.710;AC=11;AF=0.204;AN=54;BaseQRankSum=12.564;DP=1022;FS=6.530;HRun=1;HaplotypeScore=276.8494;InbreedingCoeff=0.5992;MQ=71.39;MQ0=14;MQRankSum=-11.273;QD=8.22;ReadPosRankSum=0.525;VQSLOD=0.7193;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:3.01:42,3,0	0/0:14,0:14:39.12:0,39,588	0/1:83,3:36:7.37:7,0,622	0/0:84,0:38:78.51:0,79,915	0/0:38,0:38:99:0,114,1797	0/0:26,0:26:78.27:0,78,1234	0/0:35,0:35:96.32:0,96,1489	0/0:51,0:51:99:0,153,2250	0/0:52,0:52:99:0,139,2255	0/0:54,0:54:99:0,159,2431	0/0:30,0:29:87.27:0,87,1350	1/1:2,6:7:12.96:107,13,0	0/1:5,9:11:56.62:158,0,57	0/1:1,4:3:10.14:40,0,10	0/0:61,0:61:99:0,184,2871	0/0:64,0:64:99:0,190,2988	0/0:47,0:47:99:0,132,2114	0/0:29,0:29:87.30:0,87,1389	0/0:38,0:38:99:0,111,1648	0/0:47,0:47:99:0,135,2107	0/0:97,0:97:99:0,267,4215	1/1:6,24:30:14.95:764,15,0	1/1:3,11:14:6.61:334,7,0	./.	0/0:26,0:26:78.26:0,78,1210	0/0:36,0:35:99:0,102,1564	0/0:24,0:24:72.23:0,72,1099	0/0:10,0:10:24.02:0,24,331
chr10	79721278	.	CATATATT	C	1568.44	PASS	AB=0.806;AC=10;AF=0.185;AN=54;BaseQRankSum=11.515;DP=911;FS=16.723;HRun=0;HaplotypeScore=376.0059;InbreedingCoeff=0.6865;MQ=67.28;MQ0=7;MQRankSum=-9.919;QD=24.51;ReadPosRankSum=-0.546;VQSLOD=1.5825;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:1.25:3,1,0	0/0:14,0:14:39.61:0,40,1584	0/0:53,0:33:41.24:0,41,2058	0/0:55,0:31:50.82:0,51,1974	0/0:40,0:40:99:0,120,4717	0/0:20,0:20:60.21:0,60,2455	0/0:37,0:37:99:0,108,4207	0/0:46,0:46:99:0,135,5144	0/0:54,0:54:99:0,157,5934	0/0:50,0:50:99:0,147,5596	0/0:29,0:28:87.30:0,87,3431	1/1:6,3:8:12.03:158,12,0	0/1:10,4:11:22.90:301,0,23	0/1:4,1:4:23.97:121,0,24	0/0:52,0:52:99:0,151,5917	0/0:60,0:60:99:0,175,6758	0/0:45,0:45:68.73:0,69,4635	0/0:30,0:30:81.28:0,81,3279	0/0:32,0:32:90.31:0,90,3551	0/0:46,0:46:99:0,138,5640	0/0:85,0:85:99:0,226,8657	1/1:10,12:22:48.54:710,49,0	1/1:8,4:12:28.56:427,29,0	./.	0/0:26,0:26:75.25:0,75,2896	0/0:33,0:32:96.33:0,96,3742	0/0:25,0:25:72.22:0,72,2743	0/0:11,0:11:30.10:0,30,1133
chr10	79721279	.	ATATATT	A	1500.12	PASS	AB=0.917;AC=8;AF=0.154;AN=52;BaseQRankSum=10.433;DP=875;FS=25.393;HRun=0;HaplotypeScore=336.7841;InbreedingCoeff=0.6567;MQ=67.77;MQ0=7;MQRankSum=-7.894;QD=38.46;ReadPosRankSum=1.934;VQSLOD=2.1124;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:14,0:14:39.12:0,39,1456	0/0:51,0:32:58.75:0,59,1974	0/0:54,2:30:3.63:0,4,1740	0/0:42,0:42:99:0,126,4465	0/0:20,0:20:60.21:0,60,2252	0/0:37,0:37:99:0,108,3810	0/0:46,0:46:99:0,135,4680	0/0:52,0:52:99:0,157,5399	0/0:49,0:49:99:0,147,5083	0/0:29,0:28:87.30:0,87,3104	1/1:4,2:6:12.04:230,12,0	0/1:8,2:9:19.90:320,0,20	0/1:3,0:3:23.46:98,0,23	0/0:53,0:53:99:0,159,5614	0/0:60,0:60:99:0,178,6237	0/0:44,0:44:72.52:0,73,4397	0/0:29,0:29:81.28:0,81,2994	0/0:31,0:31:93.32:0,93,3383	0/0:46,0:46:99:0,138,5182	0/0:80,0:80:99:0,229,7928	1/1:14,0:14:42.14:716,42,0	1/1:6,0:6:15.05:284,15,0	./.	0/0:25,0:25:75.23:0,75,2643	0/0:33,0:32:96.33:0,96,3398	0/0:25,0:25:72.21:0,72,2515	0/0:11,0:11:30.10:0,30,1006
chr10	79721281	.	ATATT	A	1520.91	PASS	AB=0.833;AC=9;AF=0.173;AN=52;BaseQRankSum=10.508;DP=875;FS=18.542;HRun=0;HaplotypeScore=304.0077;InbreedingCoeff=0.8366;MQ=67.89;MQ0=7;MQRankSum=-7.959;QD=40.02;ReadPosRankSum=2.021;VQSLOD=2.5668;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:14,0:14:39.12:0,39,1117	0/0:46,0:33:50.35:0,50,1581	0/0:55,0:31:45.13:0,45,1384	0/0:41,0:41:99:0,123,3392	0/0:20,0:20:60.21:0,60,1732	0/0:37,0:37:99:0,108,2882	0/0:46,0:46:99:0,138,3682	0/0:52,0:52:99:0,156,4160	0/0:51,0:51:99:0,153,3924	0/0:30,0:29:90.28:0,90,2396	1/1:6,0:6:12.04:206,12,0	0/1:8,1:9:21.80:314,0,22	1/1:2,1:3:8.98:138,9,0	0/0:51,0:51:99:0,153,4287	0/0:60,0:60:99:0,181,4833	0/0:42,1:43:75.95:0,76,3330	0/0:28,0:28:84.29:0,84,2340	0/0:33,0:33:96.31:0,96,2628	0/0:49,0:49:99:0,144,4056	0/0:81,0:81:99:0,235,6140	1/1:13,1:14:42.14:720,42,0	1/1:5,0:5:15.05:298,15,0	./.	0/0:23,0:23:69.24:0,69,1995	0/0:34,0:33:99:0,99,2600	0/0:23,0:23:66.23:0,66,1908	0/0:12,0:12:36.12:0,36,849
chr10	79721288	.	CACA	C	390.74	PASS	AB=0.726;AC=5;AF=0.093;AN=54;BaseQRankSum=8.730;DP=884;FS=13.173;HRun=0;HaplotypeScore=311.3844;InbreedingCoeff=-0.1071;MQ=67.80;MQ0=7;MQRankSum=-8.087;QD=7.51;ReadPosRankSum=1.432;VQSLOD=1.3628;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:1:3.01:0,3,51	0/0:15,0:15:42.14:0,42,921	0/0:54,0:39:80.18:0,80,1375	0/0:60,0:30:76.94:0,77,1211	0/0:41,0:41:99:0,123,2619	0/0:22,0:22:60.21:0,60,1336	0/0:39,0:39:99:0,108,2258	0/0:43,0:42:99:0,123,2543	0/0:51,0:51:99:0,150,3169	0/0:47,0:47:99:0,135,2938	0/0:25,0:25:72.22:0,72,1543	0/1:6,3:9:27.90:28,0,160	0/1:9,3:11:97.49:97,0,197	0/1:3,1:4:9.22:9,0,142	0/0:59,0:59:99:0,166,3623	0/0:57,0:57:99:0,166,3616	0/0:43,0:43:99:0,125,2678	0/0:28,0:28:81.23:0,81,1763	0/0:27,0:27:78.26:0,78,1675	0/0:50,0:50:99:0,148,3256	0/0:82,0:82:99:0,209,4876	0/1:9,11:20:99:245,0,281	0/1:3,4:7:57.92:125,0,58	./.	0/0:24,0:24:63.22:0,63,1424	0/0:26,0:26:75.25:0,75,1651	0/0:23,0:23:63.21:0,63,1354	0/0:11,0:11:33.11:0,33,730
chr10	79721306	.	A	AC	1088.19	PASS	AB=0.757;AC=8;AF=0.143;AN=56;BaseQRankSum=11.098;DP=915;FS=27.706;HRun=0;HaplotypeScore=279.8415;InbreedingCoeff=0.6616;MQ=64.52;MQ0=12;MQRankSum=-9.769;QD=18.44;ReadPosRankSum=-1.118;VQSLOD=0.2684;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:1:2.94:0,3,18	0/0:18,0:18:48.16:0,48,671	0/0:71,0:32:58.69:0,59,698	0/0:89,0:42:84.67:0,85,919	0/0:45,0:45:99:0,132,1843	0/0:18,0:18:54.18:0,54,755	0/0:39,0:38:99:0,111,1487	0/0:46,0:44:99:0,123,1655	0/0:48,0:47:99:0,141,1920	0/0:48,0:48:99:0,138,1857	0/0:29,0:29:84.28:0,84,1168	1/1:5,4:9:1.30:235,1,0	0/1:9,3:11:4.84:191,0,5	0/1:3,2:5:3.90:122,0,4	0/0:48,0:48:99:0,144,1958	0/0:51,0:51:99:0,153,2091	0/0:36,0:36:99:0,108,1492	0/0:31,0:31:93.10:0,93,1220	0/0:24,0:24:66.16:0,66,878	0/0:47,0:47:99:0,141,1945	0/0:79,0:79:99:0,206,2959	1/1:19,6:24:43.16:474,43,0	1/1:5,3:8:17.87:207,18,0	0/0:2,0:1:2.04:0,2,6	0/0:27,0:27:78.24:0,78,1055	0/0:29,0:29:87.24:0,87,1160	0/0:19,0:19:57.15:0,57,748	0/0:11,0:11:33.11:0,33,457
chr10	79721311	.	AAC	A	2782	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=9.332;DP=931;FS=7.880;HRun=0;HaplotypeScore=285.9157;InbreedingCoeff=0.8854;MQ=65.60;MQ0=12;MQRankSum=-4.674;QD=21.24;ReadPosRankSum=2.216;VQSLOD=2.7529;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:1:2.50:0,2,9	0/0:19,0:19:51.17:0,51,875	0/0:76,0:34:48.15:0,48,647	0/0:96,0:44:68.20:0,68,915	0/0:44,0:44:99:0,123,2095	0/0:19,0:19:54.18:0,54,904	0/0:40,0:41:99:0,111,1817	0/0:43,0:42:99:0,102,1619	0/0:49,0:48:99:0,124,2235	0/0:49,0:49:99:0,138,2297	0/0:27,0:27:75.24:0,75,1269	1/1:8,1:9:10.14:126,10,0	1/1:10,2:11:4.87:115,5,0	1/1:4,1:5:3.76:38,4,0	0/0:53,0:53:99:0,151,2501	0/0:52,0:52:99:0,141,2349	0/0:35,0:35:76.72:0,77,1491	1/1:12,21:33:42.42:995,42,0	0/0:23,0:22:48.14:0,48,775	0/0:47,0:47:99:0,132,2171	0/0:78,0:77:99:0,160,3030	1/1:19,3:22:36.59:257,37,0	1/1:8,0:8:11.32:48,11,0	1/1:1,1:1:2.68:11,3,0	0/0:26,0:26:75.22:0,75,1226	1/1:3,25:28:75.25:999,75,0	0/0:18,0:19:53.39:0,53,842	1/1:1,10:11:22.09:389,22,0
chr10	79721387	.	ATG	A	44.91	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=7.148;DP=786;FS=7.222;HRun=0;HaplotypeScore=162.9675;InbreedingCoeff=0.8160;MQ=69.02;MQ0=9;MQRankSum=-4.626;QD=2.81;ReadPosRankSum=-3.806;VQSLOD=1.2411;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,2:3:2.98:8,3,0	0/0:16,0:16:48.16:0,48,961	0/0:67,0:43:99:0,115,1883	0/0:89,1:45:56.13:0,56,1501	0/0:20,0:20:60.19:0,60,1166	0/0:22,0:21:63.22:0,63,1279	0/0:28,0:28:77.97:0,78,1540	0/0:29,0:29:87.28:0,87,1680	0/0:60,0:60:99:0,181,3550	0/0:45,0:45:99:0,132,2597	0/0:19,0:19:57.20:0,57,1124	1/1:1,2:3:8.81:62,9,0	1/1:0,1:1:2.90:16,3,0	./.	0/0:70,0:70:99:0,210,4156	0/0:50,0:50:99:0,150,2874	0/0:23,0:23:66.20:0,66,1289	0/0:27,0:27:64.23:0,64,1354	0/0:17,0:17:51.18:0,51,1022	0/0:38,0:38:99:0,114,2297	0/0:57,0:57:99:0,150,2854	1/1:2,2:5:5.81:32,6,0	1/1:1,3:4:8.76:62,9,0	0/0:5,1:5:1.94:0,2,6	0/0:25,0:25:75.26:0,75,1508	0/0:30,0:30:90.30:0,90,1791	0/0:17,0:17:51.18:0,51,1034	0/0:13,0:13:39.13:0,39,767
chr10	79721392	.	CACA	C	31.03	PASS	AB=0.708;AC=10;AF=0.185;AN=54;BaseQRankSum=6.790;DP=793;FS=8.948;HRun=0;HaplotypeScore=174.5474;InbreedingCoeff=0.6313;MQ=68.04;MQ0=10;MQRankSum=-5.251;QD=1.19;ReadPosRankSum=-2.950;VQSLOD=0.8016;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,2:3:5.88:37,6,0	0/0:17,0:17:51.18:0,51,1153	0/0:71,0:40:99:0,102,1746	0/0:89,0:41:75.54:0,76,1572	0/0:20,0:20:51.17:0,51,1100	0/0:25,0:24:72.25:0,72,1617	0/0:28,0:28:74.99:0,75,1522	0/0:28,0:28:78.27:0,78,1687	0/0:61,0:61:99:0,184,3972	0/0:45,0:45:99:0,126,2735	0/0:17,0:17:51.15:0,51,1007	0/1:2,2:4:4.14:22,0,4	1/1:0,1:1:2.92:17,3,0	./.	0/0:71,0:71:99:0,196,4323	0/0:47,0:47:99:0,135,2887	0/0:24,0:24:71.73:0,72,1543	0/0:26,0:26:69.24:0,69,1500	0/0:20,0:20:57.19:0,57,1163	0/0:39,0:39:99:0,114,2405	0/0:53,1:54:85.60:0,86,2877	1/1:4,2:6:8.69:48,9,0	0/1:4,2:6:21.07:36,0,21	1/1:5,1:5:0.91:3,1,0	0/0:25,0:25:75.26:0,75,1582	0/0:31,0:31:93.15:0,93,2001	0/0:17,0:17:51.18:0,51,1155	0/0:11,0:11:33.11:0,33,716
chr10	79721403	.	A	ATG	689.45	PASS	AB=0.674;AC=9;AF=0.161;AN=56;BaseQRankSum=7.664;DP=806;FS=27.818;HRun=0;HaplotypeScore=153.2412;InbreedingCoeff=0.4680;MQ=64.09;MQ0=17;MQRankSum=-5.068;QD=20.28;ReadPosRankSum=-3.138;VQSLOD=1.2562;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,2:5:8.77:132,9,0	0/0:17,0:17:48.16:0,48,778	0/0:74,0:37:53.25:0,53,1157	0/0:92,0:38:99:0,101,1211	0/0:16,0:16:48.16:0,48,760	0/0:27,0:26:75.26:0,75,1218	0/0:25,0:25:72.16:0,72,1091	0/0:33,0:33:93.30:0,93,1456	0/0:59,0:59:99:0,172,2777	0/0:45,0:45:99:0,126,2004	0/0:12,0:12:36.12:0,36,583	0/1:3,4:7:18.67:218,0,19	1/1:1,1:2:6.02:103,6,0	1/1:1,0:1:3.01:60,3,0	0/0:65,0:65:99:0,196,3102	0/0:46,0:46:99:0,132,2136	0/0:27,0:27:75.26:0,75,1204	0/0:27,0:27:75.25:0,75,1194	0/0:23,0:23:66.23:0,66,1075	0/0:31,0:31:93.32:0,93,1500	0/0:58,0:58:99:0,153,2419	0/1:8,4:12:33.66:160,0,34	0/1:3,4:7:79.39:155,0,79	0/0:6,1:6:2.37:0,2,8	0/0:24,0:24:72.23:0,72,1147	0/0:29,0:29:84.27:0,84,1343	0/0:20,0:20:57.19:0,57,918	0/0:11,0:11:30.10:0,30,489
chr10	79721418	.	A	AG	60.86	PASS	AB=0.872;AC=3;AF=0.054;AN=56;BaseQRankSum=4.230;DP=795;FS=21.318;HRun=0;HaplotypeScore=137.8539;InbreedingCoeff=-0.0592;MQ=56.68;MQ0=19;MQRankSum=-3.809;QD=2.43;ReadPosRankSum=-1.443;VQSLOD=1.6129;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:11.40:0,11,133	0/0:15,0:15:42.14:0,42,587	0/0:79,0:27:61.10:0,61,768	0/0:82,0:27:51.33:0,51,626	0/0:17,0:17:39.13:0,39,545	0/0:25,0:24:72.24:0,72,999	0/0:33,0:33:90.28:0,90,1239	0/0:31,0:30:86.86:0,87,1152	0/0:54,0:54:99:0,163,2244	0/0:45,0:45:99:0,126,1732	0/0:13,0:13:39.13:0,39,541	0/0:9,0:9:21.54:0,22,292	0/1:3,0:3:2.74:3,0,75	0/0:5,0:5:6.02:0,6,77	0/0:49,0:49:99:0,147,2055	0/0:40,0:40:99:0,114,1577	0/0:31,0:31:90.30:0,90,1253	0/0:29,0:29:87.26:0,87,1192	0/0:29,0:28:72.24:0,72,1006	0/0:25,0:25:75.22:0,75,1014	0/0:57,0:57:99:0,160,2214	0/1:11,2:13:51.55:52,0,291	0/1:6,3:9:97.40:97,0,183	0/0:7,0:7:6.01:0,6,68	0/0:24,0:24:68.89:0,69,959	0/0:27,0:27:81.27:0,81,1133	0/0:18,0:18:51.17:0,51,713	0/0:15,0:15:42.10:0,42,565
chr10	79721470	.	CA	C	182.90	PASS	AB=0.741;AC=9;AF=0.161;AN=56;BaseQRankSum=7.552;DP=761;FS=1.699;HRun=2;HaplotypeScore=144.8702;InbreedingCoeff=0.0678;MQ=52.60;MQ0=27;MQRankSum=-5.420;QD=1.25;ReadPosRankSum=0.245;VQSLOD=-0.7614;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,3:14:0.45:0,0,1	0/0:13,0:12:33.07:0,33,478	0/0:73,0:26:61.77:0,62,904	0/0:84,0:29:74.63:0,75,982	0/0:24,0:24:60.15:0,60,841	0/0:24,0:23:60.14:0,60,836	0/0:37,0:37:94.58:0,95,1296	0/0:31,0:28:81.15:0,81,1108	0/0:35,0:34:65.64:0,66,1189	0/0:38,0:38:99:0,108,1518	0/0:12,0:12:33.07:0,33,451	0/1:4,9:10:17.81:29,0,18	0/1:9,7:13:4.04:113,0,4	0/1:7,7:12:2.63:3,0,6	0/0:32,0:32:80.04:0,80,1118	0/0:35,0:35:99:0,100,1419	0/0:26,0:26:75.17:0,75,1052	0/1:22,4:25:62.96:63,0,689	0/0:26,0:25:69.22:0,69,1003	0/0:21,0:21:57.19:0,57,845	0/0:46,1:46:99:0,111,1598	0/1:4,10:14:10.02:16,0,10	0/1:5,8:12:12.83:13,0,13	0/1:5,4:9:0:0,0,1	0/0:20,0:19:18.38:0,18,405	0/1:28,2:28:57.55:58,0,935	0/0:21,0:21:60.15:0,60,855	0/1:10,0:10:17.50:17,0,185
chr10	79721479	.	CA	C	532.78	PASS	AB=0.769;AC=10;AF=0.179;AN=56;BaseQRankSum=6.197;DP=762;FS=0.661;HRun=2;HaplotypeScore=138.7662;InbreedingCoeff=0.1852;MQ=50.93;MQ0=40;MQRankSum=-4.965;QD=3.08;ReadPosRankSum=-1.081;VQSLOD=-0.2767;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,3:17:2.82:0,3,8	0/0:13,1:13:32.29:0,32,432	0/0:61,0:19:38.25:0,38,455	0/0:72,0:21:49:0,49,586	0/0:21,0:21:46.44:0,46,584	0/0:21,2:21:9.55:0,10,393	0/0:34,0:34:77.72:0,78,1018	0/0:33,0:27:74.22:0,74,870	0/0:32,1:34:37.86:0,38,946	0/0:38,0:39:95.83:0,96,1476	0/0:11,0:11:29.93:0,30,346	0/1:2,15:13:14.75:31,0,15	1/1:5,16:14:14.91:179,15,0	0/1:10,10:16:3.87:11,0,4	0/0:30,1:31:39.25:0,39,984	0/0:37,1:38:99:0,100,1284	0/0:26,1:27:40.62:0,41,889	0/1:20,6:24:99:178,0,465	0/0:25,0:24:59.90:0,60,748	0/0:22,0:22:62.42:0,62,852	0/0:47,0:46:99:0,108,1403	0/0:7,11:14:6.34:0,6,21	0/1:9,8:15:6.92:33,0,7	0/1:8,6:12:0:0,0,1	0/1:18,1:18:2.39:2,0,313	0/1:23,7:27:99:186,0,607	0/0:20,0:20:55.35:0,55,614	0/1:9,0:9:50.01:50,0,161
chr10	79721480	.	A	AC	669.74	PASS	AB=0.813;AC=9;AF=0.161;AN=56;BaseQRankSum=6.851;DP=765;FS=0.000;HRun=1;HaplotypeScore=150.0444;InbreedingCoeff=0.2194;MQ=50.69;MQ0=42;MQRankSum=-4.742;QD=4.29;ReadPosRankSum=-0.403;VQSLOD=-0.2463;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,5:16:2.84:0,3,9	0/0:13,0:13:32.80:0,33,430	0/0:59,0:17:38.25:0,38,455	0/0:71,0:19:49:0,49,586	0/0:19,0:21:44.84:0,45,570	0/0:19,0:22:25.88:0,26,405	0/0:33,0:33:79.14:0,79,1004	0/0:32,0:26:74.25:0,74,877	0/0:30,0:34:40.75:0,41,988	0/0:39,0:39:80.73:0,81,1422	0/0:11,0:11:30.03:0,30,350	0/1:16,1:13:14.75:31,0,15	1/1:18,3:14:17.79:184,18,0	0/1:14,7:17:2.51:69,0,3	0/0:28,0:32:52.42:0,52,975	0/0:37,0:39:99:0,100,1282	0/0:26,0:27:41.26:0,41,885	0/1:24,2:24:99:204,0,495	0/0:26,0:24:36.62:0,37,704	0/0:22,0:22:62.37:0,62,803	0/0:47,0:46:99:0,108,1371	0/0:18,0:15:7:0,7,23	0/1:11,7:16:6.97:13,0,7	0/1:6,8:12:0:0,0,1	0/0:14,0:21:1.67:0,2,260	0/1:29,0:26:99:227,0,508	0/0:16,0:19:54.10:0,54,651	0/1:6,4:10:78.87:79,0,92
chr10	79722506	.	A	AT	3730.39	PASS	AB=0.932;AC=16;AF=0.286;AN=56;BaseQRankSum=12.620;DP=612;FS=10.648;HRun=9;HaplotypeScore=76.3815;InbreedingCoeff=0.8519;MQ=79.46;MQ0=0;MQRankSum=-2.858;QD=21.82;ReadPosRankSum=1.996;VQSLOD=4.0797;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:33:58.17:870,58,0	0/0:11,0:11:26.99:0,27,234	0/0:24,0:24:48.48:0,48,382	0/0:11,0:11:9.56:0,10,111	0/0:40,0:40:99:0,108,934	0/0:23,0:23:50.95:0,51,439	0/0:26,0:26:65.95:0,66,569	0/0:30,0:31:76.98:0,77,649	0/0:25,0:26:68.02:0,68,579	0/0:31,0:31:80.96:0,81,702	0/0:26,0:26:59.96:0,60,521	1/1:2,21:23:37.11:638,37,0	1/1:3,13:16:36.10:398,36,0	1/1:2,12:15:36.06:385,36,0	0/0:34,0:34:53.91:0,54,695	0/0:14,0:14:32.95:0,33,279	0/0:24,1:25:38.78:0,39,561	0/1:10,1:11:12.19:12,0,135	0/1:17,1:18:0.22:0,0,227	0/0:21,0:21:56.98:0,57,495	0/0:14,0:14:41.99:0,42,364	1/1:0,13:13:39.11:431,39,0	1/1:5,18:23:45.12:498,45,0	1/1:0,19:19:45.12:498,45,0	0/0:30,0:30:68.96:0,69,599	0/0:21,0:21:50.97:0,51,443	0/0:30,0:30:80.96:0,81,699	0/0:3,0:3:9:0,9,78
chr10	79723134	.	T	TACTA	7433.57	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.135;DP=571;FS=7.472;HRun=0;HaplotypeScore=97.0329;InbreedingCoeff=0.9868;MQ=72.93;MQ0=0;MQRankSum=-5.900;QD=65.21;ReadPosRankSum=0.376;VQSLOD=6.6988;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,17:23:60.19:1519,60,0	0/0:11,0:11:33.11:0,33,614	0/0:6,0:6:18.06:0,18,302	0/0:15,0:15:36.10:0,36,604	0/0:36,0:36:99:0,102,1859	0/0:24,0:24:72.25:0,72,1337	0/0:16,0:16:39.13:0,39,728	0/0:43,0:43:99:0,123,2266	0/0:19,0:19:57.18:0,57,1030	0/0:24,0:24:69.21:0,69,1225	0/0:23,0:23:69.24:0,69,1269	1/1:1,11:12:36.12:942,36,0	1/1:9,13:23:57.11:1289,57,0	1/1:4,6:10:21.07:558,21,0	0/0:19,0:19:57.18:0,57,1013	0/0:28,0:28:81.26:0,81,1480	0/0:21,0:21:60.18:0,60,1084	0/0:10,0:10:27.09:0,27,504	0/0:20,0:20:54.19:0,54,1005	0/0:28,0:28:75.22:0,75,1289	0/0:17,0:17:42.14:0,42,761	1/1:4,12:17:42.14:1112,42,0	1/1:5,21:26:69.22:1775,69,0	1/1:1,2:3:9.03:238,9,0	0/0:30,0:30:73.45:0,73,1502	0/0:29,0:29:81.26:0,81,1434	0/0:21,0:21:57.19:0,57,1063	0/0:17,0:17:51.17:0,51,952
chr10	79723188	.	A	AT	2847.01	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.483;DP=534;FS=0.972;HRun=6;HaplotypeScore=89.9868;InbreedingCoeff=0.9797;MQ=76.92;MQ0=0;MQRankSum=-12.365;QD=25.42;ReadPosRankSum=-1.402;VQSLOD=2.9388;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,8:18:26.97:288,27,0	0/0:17,0:17:51.12:0,51,520	0/0:16,0:16:35.97:0,36,341	0/0:12,0:12:23.21:0,23,262	0/0:21,0:21:47.87:0,48,471	0/0:20,0:20:45.03:0,45,437	0/0:16,0:16:42.09:0,42,428	0/0:20,0:20:39.07:0,39,397	0/0:18,0:18:51.10:0,51,514	0/0:21,0:21:45.08:0,45,455	0/0:20,0:20:51.09:0,51,513	1/1:4,10:14:39.12:475,39,0	1/1:7,13:21:51.06:587,51,0	1/1:3,12:15:29.35:492,29,0	0/0:24,0:24:60.13:0,60,612	0/0:25,0:25:72.15:0,72,728	0/0:26,0:26:72.12:0,72,734	0/0:20,0:20:50.71:0,51,514	0/0:10,0:10:30.07:0,30,306	0/0:28,0:28:67.68:0,68,670	0/0:13,0:13:32.96:0,33,322	1/1:6,16:22:54.10:645,54,0	1/1:4,13:17:44.85:492,45,0	1/1:3,2:5:6:61,6,0	0/0:26,0:26:51.02:0,51,497	0/0:25,0:25:60.12:0,60,612	0/0:28,0:28:69.13:0,69,696	0/0:16,0:16:42.07:0,42,416
chr10	79723224	.	T	TAA	7475.32	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.352;DP=648;FS=3.111;HRun=1;HaplotypeScore=92.7604;InbreedingCoeff=0.9985;MQ=76.40;MQ0=0;MQRankSum=-8.572;QD=54.56;ReadPosRankSum=0.533;VQSLOD=4.7160;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:66.16:1260,66,0	0/0:15,0:15:45.15:0,45,725	0/0:16,0:17:50.98:0,51,731	0/0:13,0:13:36.02:0,36,475	0/0:29,0:29:84.27:0,84,1330	0/0:21,0:21:63.20:0,63,1003	0/0:19,0:19:57.15:0,57,854	0/0:26,0:26:78.23:0,78,1163	0/0:22,0:22:66.19:0,66,1024	0/0:33,0:33:93.27:0,93,1461	0/0:37,0:37:99:0,108,1761	1/1:0,16:16:48.16:973,48,0	1/1:0,18:19:51.14:995,51,0	1/1:1,16:17:51.09:907,51,0	0/0:33,0:33:99:0,99,1520	0/0:26,0:26:78.27:0,78,1272	0/0:21,0:21:63.21:0,63,1007	0/0:19,0:19:57.19:0,57,928	0/0:16,0:16:48.16:0,48,779	0/0:45,0:45:99:0,135,2146	0/0:16,0:16:48.13:0,48,726	1/1:0,29:29:87.21:1660,87,0	1/1:1,23:24:69.22:1316,69,0	1/1:0,8:8:18.06:365,18,0	0/0:23,0:23:66.21:0,66,1050	0/0:29,0:29:84.29:0,84,1368	0/0:36,0:36:99:0,105,1688	0/0:15,0:15:45.15:0,45,729
chr10	79723557	.	TG	T	1452.05	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.203;DP=689;FS=0.000;HRun=1;HaplotypeScore=93.4082;InbreedingCoeff=0.9979;MQ=90.95;MQ0=0;MQRankSum=-2.913;QD=33.00;ReadPosRankSum=1.681;VQSLOD=3.3663;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.28:0,87,1306	0/0:14,0:14:42.13:0,42,618	0/0:29,1:30:70.27:0,70,1201	0/0:26,0:26:62.68:0,63,912	0/0:28,0:28:84.24:0,84,1238	0/0:29,0:29:87.26:0,87,1287	0/0:17,0:17:51.10:0,51,691	0/0:34,0:34:99:0,99,1475	0/0:19,0:19:57.19:0,57,872	0/0:32,0:32:96.30:0,96,1399	0/0:34,0:34:99:0,102,1479	0/0:20,0:20:60.16:0,60,851	0/0:22,0:22:66.12:0,66,915	0/0:24,0:24:69.20:0,69,1010	0/0:19,0:19:57.18:0,57,846	0/0:17,0:17:51.13:0,51,715	0/0:34,0:34:99:0,102,1537	1/1:0,12:12:30.10:413,30,0	0/0:27,0:27:81.24:0,81,1180	0/0:39,0:39:99:0,117,1682	0/0:15,0:15:42.07:0,42,615	0/0:22,0:22:63.11:0,63,912	0/0:29,0:29:84.23:0,84,1213	0/0:22,0:22:66.19:0,66,964	0/0:20,0:20:60.17:0,60,872	1/1:1,24:25:26.28:908,26,0	0/0:41,0:41:99:0,123,1741	1/1:0,7:7:21.04:273,21,0
chr10	79723902	.	A	AT	4429.69	PASS	AB=0.923;AC=21;AF=0.375;AN=56;BaseQRankSum=-2.807;DP=564;FS=2.144;HRun=8;HaplotypeScore=52.3225;InbreedingCoeff=0.9111;MQ=74.36;MQ0=0;MQRankSum=-1.581;QD=25.90;ReadPosRankSum=1.858;VQSLOD=5.6557;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,10:13:32.93:361,33,0	0/0:8,0:8:6.60:0,7,175	0/0:10,0:10:20.99:0,21,188	0/0:10,0:10:8.83:0,9,119	0/0:31,0:31:84.04:0,84,768	0/0:24,0:24:72.02:0,72,654	0/0:14,0:14:39.01:0,39,357	0/0:52,0:52:99:0,111,1007	0/0:17,0:17:45.01:0,45,412	0/0:29,0:29:72.03:0,72,659	0/0:27,0:27:66.02:0,66,604	1/1:1,8:9:21.06:242,21,0	1/1:4,15:19:42.08:463,42,0	1/1:3,11:14:33.10:381,33,0	0/0:23,0:23:51:0,51,467	0/0:24,0:24:72.04:0,72,659	0/0:18,0:18:51.03:0,51,467	1/1:4,11:15:36.07:401,36,0	0/0:22,0:22:51.02:0,51,466	0/0:28,0:28:78.04:0,78,713	0/1:11,1:12:7.61:8,0,193	1/1:1,8:9:24.03:262,24,0	1/1:3,19:22:51.15:589,51,0	1/1:2,13:15:33.10:381,33,0	0/0:25,0:25:72.02:0,72,655	1/1:2,18:20:29.67:583,30,0	0/0:31,0:31:84.02:0,84,764	1/1:0,23:23:65.47:760,65,0
chr10	79724091	.	GCTGCCTTTGCTT	G	4299.34	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=11.647;DP=473;FS=21.231;HRun=0;HaplotypeScore=178.7516;InbreedingCoeff=0.9468;MQ=81.09;MQ0=0;MQRankSum=-9.806;QD=58.90;ReadPosRankSum=0.706;VQSLOD=2.7617;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,4:7:14.97:335,15,0	0/0:7,0:7:21.06:0,21,1142	0/0:12,0:12:33.10:0,33,1481	0/0:17,0:17:51.17:0,51,2453	0/0:27,0:27:81.28:0,81,4621	0/0:23,0:23:66.21:0,66,3821	0/0:15,0:15:45.14:0,45,2413	0/0:31,0:31:93.32:0,93,5601	0/0:12,0:12:36.12:0,36,2223	0/0:23,0:23:66.22:0,66,3809	0/0:26,0:26:78.25:0,78,4577	1/1:6,4:10:15:417,15,0	1/1:3,11:14:36.11:1118,36,0	1/1:5,8:13:27.04:811,27,0	0/0:23,0:23:63.20:0,63,3681	0/0:18,0:18:54.17:0,54,3063	0/0:23,0:23:66.23:0,66,3984	0/0:15,0:15:42.06:0,42,1957	0/0:20,0:20:57.18:0,57,2801	0/0:36,0:36:99:0,102,5997	0/0:18,0:18:51.18:0,51,3147	1/1:2,6:8:21.02:537,21,0	1/1:6,11:17:42.02:1080,42,0	0/1:4,0:4:0:0,0,0	0/0:17,0:17:51.18:0,51,3102	0/0:12,0:12:36.12:0,36,1967	0/0:22,0:22:66.23:0,66,3965	0/0:3,0:3:9.03:0,9,558
chr10	79724106	.	AC	A	931.65	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=10.550;DP=454;FS=20.989;HRun=1;HaplotypeScore=76.3810;InbreedingCoeff=0.9639;MQ=80.76;MQ0=0;MQRankSum=-10.406;QD=21.17;ReadPosRankSum=4.119;VQSLOD=2.4955;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:4:9:79,9,0	0/0:6,0:6:18.06:0,18,288	0/0:11,0:11:33.11:0,33,528	0/0:20,0:20:57.19:0,57,892	0/0:31,0:31:87.26:0,87,1340	0/0:22,0:22:63.21:0,63,1007	0/0:13,0:13:39.13:0,39,624	0/0:30,0:30:87.28:0,87,1365	0/0:14,0:14:42.12:0,42,646	0/0:26,0:26:78.26:0,78,1224	0/0:27,0:27:81.26:0,81,1263	1/1:0,4:4:12.01:113,12,0	1/1:0,11:11:33.01:300,33,0	1/1:0,8:8:24.01:214,24,0	0/0:24,0:24:72.25:0,72,1145	0/0:19,0:19:57.17:0,57,865	0/0:23,0:23:69.24:0,69,1100	0/0:14,0:14:36.12:0,36,570	0/0:14,0:14:42.12:0,42,628	0/0:40,0:40:99:0,120,1868	0/0:18,0:18:48.16:0,48,767	1/1:0,6:6:15.01:135,15,0	1/1:0,11:11:30.01:270,30,0	./.	0/0:22,0:22:63.21:0,63,1007	0/0:11,0:11:33.11:0,33,528	0/0:22,0:22:66.23:0,66,1055	0/0:3,0:3:9.03:0,9,144
chr10	79726074	.	AGATATACCACTTTTTTTTT	A	2835.05	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.555;DP=420;FS=7.694;HRun=0;HaplotypeScore=201.2204;InbreedingCoeff=0.8648;MQ=75.11;MQ0=0;MQRankSum=-7.627;QD=39.38;ReadPosRankSum=1.456;VQSLOD=2.2253;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:17:12.03:534,12,0	0/0:13,0:13:30.10:0,30,2425	0/0:8,0:9:12.51:0,13,418	0/0:9,0:9:9.03:0,9,645	0/0:37,0:37:93.31:0,93,6770	0/0:24,0:24:54.19:0,54,4312	0/0:11,0:11:30.10:0,30,2258	0/0:35,0:35:69.22:0,69,3774	0/0:15,0:15:30.10:0,30,2569	0/0:18,0:18:45.15:0,45,3625	0/0:20,0:20:45.15:0,45,3452	1/1:1,6:7:9.03:459,9,0	1/1:6,4:10:6.01:306,6,0	1/1:1,6:7:9.03:459,9,0	0/0:10,0:10:27.09:0,27,1922	0/0:11,0:11:21.07:0,21,1580	0/0:20,0:20:51.15:0,51,3477	0/0:5,0:5:12.04:0,12,914	0/0:19,0:19:42.14:0,42,3190	0/0:20,0:20:51.16:0,51,4211	0/0:11,0:11:21.07:0,21,1337	1/1:2,9:11:18.06:818,18,0	1/1:5,10:15:9.02:361,9,0	1/1:5,0:5:3.01:72,3,0	0/0:23,0:23:63.22:0,63,5053	0/0:12,0:12:33.11:0,33,2116	0/0:21,0:21:57.20:0,57,4717	0/0:5,0:5:6.02:0,6,439
chr10	79726084	.	CT	C	390.04	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=9.379;DP=401;FS=1.413;HRun=9;HaplotypeScore=57.9930;InbreedingCoeff=0.7076;MQ=72.77;MQ0=0;MQRankSum=-5.581;QD=4.82;ReadPosRankSum=1.052;VQSLOD=0.1375;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:7.66:23,8,0	0/0:12,0:12:33.10:0,33,381	0/0:10,0:9:12.03:0,12,131	0/0:6,0:6:9.03:0,9,104	0/0:36,0:36:87.24:0,87,988	0/0:24,0:24:60.17:0,60,682	0/0:10,0:10:27.08:0,27,312	0/0:30,0:30:75.20:0,75,849	0/0:14,0:14:39.12:0,39,450	0/0:20,0:20:51.11:0,51,573	0/0:18,0:18:48.12:0,48,537	1/1:7,0:7:6.11:19,6,0	1/1:6,0:6:4.07:13,4,0	1/1:7,0:7:6.11:19,6,0	0/0:11,0:11:33.09:0,33,371	0/0:13,0:13:33.09:0,33,372	0/0:19,0:19:45.13:0,45,519	1/1:0,5:5:15.01:137,15,0	0/0:17,0:18:50.98:0,51,568	0/0:21,0:21:51.15:0,51,589	0/0:9,0:9:18.05:0,18,208	0/1:11,0:11:2.69:19,0,3	0/1:13,0:13:5.70:6,0,9	0/0:4,0:4:5.52:0,6,27	0/0:22,0:22:63.19:0,63,727	1/1:1,12:13:1.40:267,1,0	0/0:23,0:22:66.15:0,66,747	1/1:0,2:2:6:55,6,0
chr10	79726194	.	A	ATATAT	2649.39	PASS	AB=0.600;AC=19;AF=0.339;AN=56;BaseQRankSum=5.839;DP=343;FS=7.431;HRun=0;HaplotypeScore=94.4559;InbreedingCoeff=0.8541;MQ=52.08;MQ0=7;MQRankSum=-10.087;QD=32.31;ReadPosRankSum=-0.591;VQSLOD=2.4242;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,10:11:17.85:170,18,0	0/0:8,0:8:18.06:0,18,358	0/0:13,0:6:18.06:0,18,371	0/0:9,0:6:12.04:0,12,235	0/0:22,0:22:36.11:0,36,714	0/0:13,0:12:23.25:0,23,376	0/0:10,0:10:30.10:0,30,589	0/0:25,0:25:48.16:0,48,899	0/0:10,0:10:30.10:0,30,607	0/0:17,0:17:48.14:0,48,904	0/0:19,0:19:54.18:0,54,1045	1/1:2,4:6:9:184,9,0	1/1:5,6:10:23.91:381,24,0	1/1:0,4:4:5.93:40,6,0	0/0:14,0:14:33.09:0,33,644	0/0:12,0:12:26.91:0,27,522	0/0:15,0:15:33.11:0,33,636	1/1:6,3:8:21.03:535,21,0	0/0:12,0:11:30.05:0,30,544	0/0:19,0:18:38.97:0,39,738	0/0:11,0:9:21.07:0,21,433	1/1:3,0:3:9.02:159,9,0	1/1:4,2:6:12:192,12,0	0/1:2,4:6:13.95:14,0,24	0/0:17,0:16:17.97:0,18,360	1/1:5,10:13:7.69:938,8,0	0/0:15,0:15:30.09:0,30,576	1/1:3,7:10:12.01:240,12,0
chr10	79726199	.	TG	T	881.22	PASS	AB=0.798;AC=18;AF=0.321;AN=56;BaseQRankSum=10.075;DP=326;FS=12.954;HRun=1;HaplotypeScore=77.0630;InbreedingCoeff=0.7431;MQ=49.91;MQ0=9;MQRankSum=-9.631;QD=13.15;ReadPosRankSum=-0.437;VQSLOD=1.1893;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,1:9:17.85:142,18,0	0/0:8,0:8:17.81:0,18,270	0/0:13,0:6:18.06:0,18,288	0/0:8,0:5:12.02:0,12,152	0/0:22,0:22:35.68:0,36,571	0/0:15,0:14:24.07:0,24,344	0/0:10,0:10:30.10:0,30,474	0/0:20,0:20:57.14:0,57,852	0/0:11,0:11:30.57:0,31,481	0/0:17,0:17:51.14:0,51,764	0/0:20,0:20:54.16:0,54,797	1/1:2,1:3:8.97:84,9,0	1/1:5,4:8:23.87:224,24,0	1/1:2,0:2:5.93:40,6,0	0/0:12,0:12:33.09:0,33,503	0/0:13,0:13:32.97:0,33,461	0/0:16,0:15:39.13:0,39,621	0/1:7,2:8:74.21:76,0,74	0/0:12,0:11:33.10:0,33,498	0/0:18,0:17:38.46:0,38,584	0/0:13,0:11:21.06:0,21,313	1/1:0,3:3:6.91:84,7,0	1/1:1,3:4:11.98:118,12,0	1/1:7,1:8:2.80:20,3,0	0/0:18,0:16:21.07:0,21,334	0/1:10,4:12:16.22:139,0,16	0/0:13,0:13:33.08:0,33,493	1/1:2,3:4:12.01:146,12,0
chr10	79726227	.	CACACACACACACACACACACACAT	C	2734.05	PASS	AB=0.625;AC=13;AF=0.250;AN=52;BaseQRankSum=6.778;DP=341;FS=0.964;HRun=0;HaplotypeScore=176.5659;InbreedingCoeff=0.7325;MQ=47.38;MQ0=18;MQRankSum=-5.289;QD=85.44;ReadPosRankSum=5.085;VQSLOD=3.0771;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:4:3.01:164,3,0	0/0:7,0:7:11.82:0,12,870	0/0:11,0:2:6.02:0,6,125	0/0:11,0:5:15.05:0,15,389	0/0:27,0:27:47.91:0,48,3733	0/0:18,0:17:15.03:0,15,935	0/0:12,0:12:30.09:0,30,2626	0/0:25,0:23:63.17:0,63,3176	0/0:14,0:14:39.13:0,39,3599	0/0:19,0:18:54.19:0,54,4617	0/0:19,0:19:51.18:0,51,4382	1/1:1,0:1:3.01:163,3,0	1/1:4,0:3:9.03:489,9,0	./.	0/0:13,0:13:33.11:0,33,2609	0/0:12,0:12:30.10:0,30,3171	0/0:20,0:18:48.10:0,48,4025	0/0:6,0:5:11.97:0,12,228	0/0:15,0:14:38.01:0,38,1534	0/0:21,0:20:30.10:0,30,2730	0/0:21,0:19:39.06:0,39,2581	1/1:8,0:8:9.03:441,9,0	1/1:4,0:3:9.03:461,9,0	./.	0/0:22,0:20:19:0,19,1827	0/1:2,3:4:99:582,0,273	0/0:14,0:14:29.69:0,30,1964	1/1:2,3:3:9.03:594,9,0
chr10	79726231	.	CACACACACACACACACACAT	C	2584.09	PASS	AB=1.000;AC=13;AF=0.250;AN=52;BaseQRankSum=7.255;DP=371;FS=0.000;HRun=0;HaplotypeScore=168.0358;InbreedingCoeff=0.7441;MQ=47.35;MQ0=17;MQRankSum=-5.836;QD=48.76;ReadPosRankSum=3.657;VQSLOD=2.8878;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,1:8:3.01:170,3,0	0/0:6,0:6:11.67:0,12,676	0/0:10,0:2:3:0,3,25	0/0:10,0:4:9:0,9,175	0/0:28,0:28:50.91:0,51,3025	0/0:18,0:17:15.03:0,15,713	0/0:13,0:13:33.08:0,33,2185	0/0:27,0:25:69.13:0,69,2434	0/0:14,0:14:39.13:0,39,2945	0/0:21,0:20:60.19:0,60,3824	0/0:21,0:21:57.15:0,57,3565	1/1:5,1:6:6:192,6,0	1/1:6,3:9:14.75:538,15,0	./.	0/0:13,0:13:30.09:0,30,2027	0/0:13,0:13:33.10:0,33,2667	0/0:20,0:18:48.10:0,48,3306	0/0:5,0:4:11.23:0,11,137	0/0:15,0:14:35.82:0,36,1035	0/0:22,0:21:33.09:0,33,2252	0/0:21,0:19:39.02:0,39,2034	1/1:7,3:10:9.03:462,9,0	1/1:6,3:8:12:501,12,0	./.	0/0:24,0:22:24.53:0,25,1588	0/1:5,0:4:99:436,0,221	0/0:13,0:13:27.08:0,27,1509	1/1:5,0:3:9.03:449,9,0
chr10	79726249	.	CAT	C	782.38	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=9.614;DP=443;FS=23.338;HRun=0;HaplotypeScore=101.4647;InbreedingCoeff=0.9023;MQ=70.32;MQ0=15;MQRankSum=-4.584;QD=8.32;ReadPosRankSum=1.747;VQSLOD=1.7460;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:11.95:91,12,0	0/0:5,0:5:6.01:0,6,64	0/0:20,0:12:26.08:0,26,245	0/0:18,0:13:27.25:0,27,203	0/0:28,0:28:50.84:0,51,462	0/0:18,0:17:15:0,15,149	0/0:17,0:17:34.24:0,34,355	0/0:28,0:26:56.77:0,57,472	0/0:16,0:16:39.47:0,39,414	0/0:22,0:21:41.30:0,41,484	0/0:23,0:23:54.02:0,54,599	1/1:7,0:7:5.98:47,6,0	1/1:13,0:13:20.61:142,21,0	1/1:5,0:5:8.98:72,9,0	0/0:14,0:14:35.61:0,36,390	0/0:13,0:13:24.94:0,25,423	0/0:18,0:17:24.02:0,24,377	1/1:5,0:5:14.88:108,15,0	0/0:16,0:15:30.33:0,30,251	0/0:25,0:24:29.74:0,30,259	0/0:23,0:22:38.89:0,39,404	1/1:3,7:10:8.78:60,9,0	1/1:15,0:14:20.73:147,21,0	1/1:7,0:6:2.93:24,3,0	0/0:28,0:27:39:0,39,368	1/1:13,0:12:34.11:224,34,0	0/0:16,0:16:31.71:0,32,307	1/1:5,0:3:8.98:72,9,0
chr10	79726699	.	T	TGTG	8049.44	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.575;DP=618;FS=4.575;HRun=0;HaplotypeScore=92.8812;InbreedingCoeff=0.9986;MQ=82.77;MQ0=0;MQRankSum=-4.426;QD=52.27;ReadPosRankSum=3.653;VQSLOD=7.0213;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,18:23:42.14:956,42,0	0/0:8,0:8:21.07:0,21,358	0/0:20,0:20:54.16:0,54,812	0/0:17,0:17:46.04:0,46,726	0/0:37,0:37:99:0,105,1765	0/0:33,0:33:96.33:0,96,1632	0/0:16,0:16:24.58:0,25,744	0/0:30,0:30:87.29:0,87,1446	0/0:25,0:25:72.24:0,72,1199	0/0:28,0:28:84.27:0,84,1367	0/0:26,0:26:78.27:0,78,1331	1/1:5,24:30:66.23:1508,66,0	1/1:1,18:19:45.15:1032,45,0	1/1:2,16:18:42.14:960,42,0	0/0:15,0:14:42.13:0,42,685	0/0:18,0:18:51.14:0,51,813	0/0:24,0:24:66.23:0,66,1125	0/0:11,0:11:30.10:0,30,511	0/0:13,0:13:33.11:0,33,563	0/0:37,0:37:99:0,108,1842	0/0:10,0:10:30.10:0,30,512	1/1:2,21:23:57.20:1290,57,0	1/1:0,24:24:66.12:1479,66,0	1/1:3,14:17:36.12:824,36,0	0/0:27,0:27:78.27:0,78,1313	0/0:23,0:23:69.24:0,69,1167	0/0:35,0:34:96.29:0,96,1557	0/0:11,0:11:33.08:0,33,508
chr10	79726879	.	CA	C	1692.02	PASS	AB=0.528;AC=5;AF=0.089;AN=56;BaseQRankSum=6.624;DP=671;FS=9.010;HRun=1;HaplotypeScore=98.3002;InbreedingCoeff=0.7881;MQ=85.26;MQ0=0;MQRankSum=-3.698;QD=32.54;ReadPosRankSum=1.671;VQSLOD=2.5687;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,2010	0/0:10,0:10:30.06:0,30,428	0/0:20,0:20:57.18:0,57,858	0/0:22,0:22:59.44:0,59,878	0/0:30,0:30:90.27:0,90,1406	0/0:35,0:35:99:0,105,1655	0/0:20,0:20:60.20:0,60,957	0/0:19,0:19:57.19:0,57,911	0/0:19,0:19:54.18:0,54,863	0/0:30,0:30:90.31:0,90,1425	0/0:26,0:26:78.27:0,78,1237	0/0:37,0:37:99:0,111,1769	0/0:19,0:19:57.16:0,57,859	0/0:23,0:23:69.24:0,69,1098	0/0:26,0:26:78.27:0,78,1247	0/0:26,0:26:78.26:0,78,1228	0/0:28,0:28:81.26:0,81,1270	1/1:1,11:12:27.59:378,28,0	0/0:24,0:24:69.23:0,69,1080	0/0:26,0:26:78.22:0,78,1173	0/0:23,0:23:69.21:0,69,1075	0/0:24,0:24:72.25:0,72,1146	0/0:14,0:14:42.14:0,42,669	0/0:31,0:31:93.32:0,93,1483	0/0:21,0:21:60.20:0,60,955	0/1:3,25:28:14.72:940,0,15	0/0:24,0:24:72.24:0,72,1136	1/1:0,12:12:36.12:504,36,0
chr10	79728210	.	GGT	G	122.54	PASS	AB=0.967;AC=15;AF=0.417;AN=36;BaseQRankSum=3.650;DP=518;FS=2.017;HRun=0;HaplotypeScore=84.5683;InbreedingCoeff=0.3927;MQ=59.52;MQ0=13;MQRankSum=-2.850;QD=0.73;ReadPosRankSum=3.417;VQSLOD=1.3477;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/1:8,0:8:0:0,0,0	./.	./.	0/0:17,0:16:12.03:0,12,156	./.	0/0:18,0:18:3.01:0,3,44	0/0:24,0:23:0.89:0,1,2	1/1:7,5:12:9.02:95,9,0	0/0:15,0:15:3.01:0,3,38	0/0:19,0:19:3:0,3,26	1/1:24,0:23:2.84:14,3,0	1/1:14,0:13:8.28:38,8,0	./.	0/1:23,0:23:18.09:18,0,38	./.	0/0:22,0:21:12.02:0,12,148	0/1:8,0:8:0.77:9,0,1	./.	0/0:20,0:20:3.01:0,3,41	0/0:40,0:37:9.01:0,9,102	1/1:23,0:23:2.84:14,3,0	./.	1/1:29,0:27:3.73:16,4,0	./.	1/1:23,0:25:6.74:39,7,0	0/0:16,0:15:2.96:0,3,19	./.
chr10	79728372	.	TACAC	T	2468.27	PASS	AB=0.647;AC=15;AF=0.288;AN=52;BaseQRankSum=10.332;DP=682;FS=0.000;HRun=0;HaplotypeScore=153.9883;InbreedingCoeff=0.9263;MQ=62.22;MQ0=10;MQRankSum=-2.394;QD=16.91;ReadPosRankSum=2.298;VQSLOD=3.0112;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,16:21:2.79:51,3,0	0/0:12,0:12:36.11:0,36,855	0/0:52,0:26:22.83:0,23,671	0/0:51,0:15:34.45:0,34,662	0/0:20,0:22:50.96:0,51,1171	0/0:17,0:17:36.59:0,37,906	0/0:17,0:17:36.11:0,36,824	0/0:27,0:27:57.18:0,57,1300	0/0:24,0:24:63.19:0,63,1463	0/0:33,0:33:90.28:0,90,2092	0/0:14,0:14:33.11:0,33,830	1/1:6,23:30:17.86:307,18,0	1/1:6,13:19:21.07:360,21,0	1/1:4,15:18:14.08:212,14,0	0/0:31,0:31:62.85:0,63,1623	0/0:21,0:21:48.14:0,48,1140	0/0:31,0:31:78.14:0,78,1734	1/1:2,14:16:33.09:536,33,0	0/0:17,0:17:42.12:0,42,990	0/0:25,0:25:63.18:0,63,1426	0/0:53,0:53:99:0,150,3247	./.	./.	0/1:5,6:10:0.01:0,0,0	0/0:27,0:27:78.22:0,78,1785	1/1:4,19:23:35.15:917,35,0	0/0:23,0:24:68.97:0,69,1495	1/1:1,6:7:17.65:267,18,0
chr10	79728429	.	G	GCACACACACA	1148.57	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.630;DP=731;FS=4.577;HRun=0;HaplotypeScore=246.2849;InbreedingCoeff=0.9016;MQ=55.07;MQ0=10;MQRankSum=-4.035;QD=7.32;ReadPosRankSum=-4.210;VQSLOD=1.4217;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:35:14.98:132,15,0	0/0:8,0:8:21:0,21,506	0/0:46,0:13:3.44:0,3,193	0/0:60,0:24:48.57:0,49,761	0/0:23,0:23:59.90:0,60,1167	0/0:21,0:21:53.85:0,54,1336	0/0:14,0:14:36.07:0,36,766	0/0:23,0:23:61.22:0,61,944	0/0:32,0:32:51.83:0,52,2256	0/0:26,0:26:71.94:0,72,1488	0/0:10,0:10:27.09:0,27,815	1/1:21,4:27:18.53:331,19,0	1/1:15,3:18:17.97:367,18,0	1/1:13,7:21:15.91:354,16,0	0/0:20,0:20:45.21:0,45,1216	0/0:20,0:20:54.10:0,54,1444	0/0:41,0:41:96.55:0,97,2401	0/0:23,0:23:45.12:0,45,1352	0/0:21,0:20:53.75:0,54,876	0/0:27,0:27:57.45:0,57,1410	0/0:68,0:68:99:0,186,4541	1/1:18,3:22:5.95:50,6,0	1/1:17,1:18:5.78:49,6,0	1/1:10,0:12:6.46:49,6,0	0/0:28,0:28:69.05:0,69,1472	0/0:26,0:26:64.16:0,64,1339	0/0:25,0:25:68.98:0,69,1412	0/0:10,0:10:18.95:0,19,488
chr10	79728899	.	C	CT	5978.08	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.741;DP=636;FS=5.220;HRun=5;HaplotypeScore=77.2149;InbreedingCoeff=0.9999;MQ=90.59;MQ0=0;MQRankSum=-0.635;QD=33.97;ReadPosRankSum=4.125;VQSLOD=5.0970;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:33:84.27:1105,84,0	0/0:14,0:14:39.09:0,39,412	0/0:28,0:29:64.86:0,65,695	0/0:24,0:24:63.15:0,63,668	0/0:32,0:32:96.24:0,96,1030	0/0:15,0:15:42.11:0,42,451	0/0:25,0:25:69.17:0,69,741	0/0:26,0:26:69.12:0,69,722	0/0:27,0:27:75.15:0,75,789	0/0:28,0:27:81.20:0,81,871	0/0:19,0:19:51.11:0,51,540	1/1:2,18:20:48.16:632,48,0	1/1:0,25:26:75.24:984,75,0	1/1:0,24:24:66.17:849,66,0	0/0:17,0:17:48.12:0,48,515	0/0:22,0:22:66.14:0,66,694	0/0:32,0:32:96.22:0,96,1023	0/0:14,0:14:36.04:0,36,373	0/0:14,0:14:39.09:0,39,414	0/0:28,0:28:84.17:0,84,880	0/0:16,0:16:48.12:0,48,516	1/1:1,21:22:48.16:632,48,0	1/1:1,33:34:93.30:1224,93,0	1/1:2,15:17:42.14:553,42,0	0/0:21,0:21:60.15:0,60,645	0/0:16,0:16:42.11:0,42,451	0/0:23,0:22:66.17:0,66,709	0/0:18,0:18:54.14:0,54,580
chr10	79729828	.	TTC	T	499.69	PASS	AB=1.000;AC=7;AF=0.167;AN=42;BaseQRankSum=4.664;DP=473;FS=11.392;HRun=0;HaplotypeScore=83.6292;InbreedingCoeff=0.8228;MQ=67.35;MQ0=26;MQRankSum=-5.928;QD=7.93;ReadPosRankSum=-3.619;VQSLOD=1.2330;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:7:21.04:0,21,277	0/1:29,0:16:9.91:10,0,133	0/0:47,0:21:19.22:0,19,167	0/0:38,0:36:79.43:0,79,1059	0/0:21,0:20:17.28:0,17,225	0/0:18,0:14:34.29:0,34,426	0/0:28,0:27:50.31:0,50,798	0/0:17,0:16:16.28:0,16,373	0/0:23,0:23:64.96:0,65,758	0/0:29,0:28:72.71:0,73,883	./.	./.	./.	0/0:18,0:18:42.69:0,43,467	0/0:15,0:14:39.03:0,39,459	0/0:29,0:29:74.91:0,75,973	1/1:9,2:10:17.26:168,17,0	0/0:22,0:20:59.88:0,60,712	0/0:36,0:32:70.87:0,71,1124	0/0:11,0:11:23.95:0,24,297	./.	./.	./.	0/0:16,0:16:43.27:0,43,470	1/1:15,2:17:34.41:352,34,0	0/0:25,0:24:35.69:0,36,652	1/1:6,0:5:14.80:105,15,0
chr10	79729829	.	TC	T	718.30	PASS	AB=1.000;AC=7;AF=0.167;AN=42;BaseQRankSum=4.895;DP=468;FS=3.633;HRun=1;HaplotypeScore=72.2088;InbreedingCoeff=0.8860;MQ=65.43;MQ0=27;MQRankSum=-5.915;QD=11.59;ReadPosRankSum=-2.527;VQSLOD=1.1594;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:7:21.03:0,21,222	0/1:28,0:15:1.24:1,0,122	0/0:46,0:20:22.30:0,22,186	0/0:38,0:36:76.91:0,77,816	0/0:22,0:21:26.75:0,27,169	0/0:17,0:13:35.24:0,35,341	0/0:28,0:27:54.31:0,54,658	0/0:16,0:15:23.34:0,23,295	0/0:23,0:23:56.45:0,56,585	0/0:29,0:28:62.97:0,63,660	./.	./.	./.	0/0:18,0:18:40.56:0,41,355	0/0:15,0:14:33.87:0,34,307	0/0:29,0:29:46.12:0,46,688	1/1:8,3:10:29.69:244,30,0	0/0:23,0:20:59.06:0,59,584	0/0:35,0:31:69.64:0,70,884	0/0:10,0:10:23.92:0,24,233	./.	./.	./.	0/0:16,0:16:26.89:0,27,361	1/1:14,3:17:44.06:448,44,0	0/0:24,0:23:28.36:0,28,490	1/1:4,2:5:15:158,15,0
chr10	79730253	.	C	CT	3073.57	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.308;DP=570;FS=0.000;HRun=7;HaplotypeScore=71.9256;InbreedingCoeff=0.9854;MQ=81.97;MQ0=0;MQRankSum=-0.739;QD=26.73;ReadPosRankSum=1.556;VQSLOD=4.3451;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:27.08:326,27,0	0/0:10,0:10:27.03:0,27,255	0/0:12,0:12:30.04:0,30,288	0/0:20,0:20:30.80:0,31,397	0/0:35,0:35:93.14:0,93,892	0/0:26,0:26:66.08:0,66,631	0/0:9,0:9:27.01:0,27,253	0/0:29,0:29:72.09:0,72,686	0/0:20,0:20:54.08:0,54,521	0/0:28,0:28:78.12:0,78,753	0/0:20,0:20:54.08:0,54,521	1/1:2,6:8:12.04:145,12,0	1/1:1,20:21:54.17:652,54,0	1/1:1,18:19:45.14:544,45,0	0/0:28,0:28:78.08:0,78,732	0/0:21,0:21:57.08:0,57,545	0/0:20,0:20:54.08:0,54,521	0/0:22,0:22:50.75:0,51,475	0/0:26,0:26:63.09:0,63,608	0/0:35,0:35:87.11:0,87,829	0/0:12,0:12:33.05:0,33,319	1/1:2,28:30:75.23:905,75,0	1/1:1,17:18:10.62:406,11,0	1/1:2,8:10:24.07:290,24,0	0/0:22,0:22:57.06:0,57,541	0/0:20,0:20:54.09:0,54,521	0/0:30,0:30:78.10:0,78,747	0/0:10,0:10:30.05:0,30,289
chr10	79730539	.	T	TGGG	3163.49	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.527;DP=601;FS=11.661;HRun=5;HaplotypeScore=121.1996;InbreedingCoeff=0.9867;MQ=91.48;MQ0=0;MQRankSum=-11.282;QD=21.97;ReadPosRankSum=-0.886;VQSLOD=-0.0177;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,7:24:30.08:544,30,0	0/0:10,0:10:27.06:0,27,376	0/0:32,0:31:81.26:0,81,1167	0/0:28,0:30:69.22:0,69,976	0/0:33,0:33:90.26:0,90,1284	0/0:31,0:31:78.24:0,78,1131	0/0:22,0:22:60.20:0,60,885	0/0:20,0:20:57.15:0,57,785	0/0:14,0:14:42.12:0,42,598	0/0:28,0:28:78.23:0,78,1127	0/0:20,0:20:51.16:0,51,746	1/1:11,7:18:35.31:649,35,0	1/1:7,16:24:45.15:945,45,0	1/1:9,12:22:14.48:283,14,0	0/0:18,0:18:51.16:0,51,730	0/0:18,0:18:45.15:0,45,662	0/0:26,0:26:75.25:0,75,1106	0/0:18,0:18:42.11:0,42,594	0/0:20,0:20:57.19:0,57,840	0/0:18,0:18:51.16:0,51,731	0/0:17,0:17:48.16:0,48,708	1/1:12,11:24:21.54:420,22,0	1/1:11,5:16:12.04:258,12,0	1/1:7,9:16:14.86:260,15,0	0/0:23,0:23:69.23:0,69,1016	0/0:24,0:25:69.19:0,69,978	0/0:26,0:26:78.25:0,78,1129	0/0:8,0:8:24.08:0,24,354
chr10	79730650	.	TAAA	T	2114.90	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.322;DP=627;FS=5.528;HRun=5;HaplotypeScore=130.1511;InbreedingCoeff=0.9978;MQ=78.51;MQ0=0;MQRankSum=-3.640;QD=39.90;ReadPosRankSum=2.875;VQSLOD=2.0263;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,1873	0/0:8,0:8:24.07:0,24,511	0/0:13,0:13:39.13:0,39,875	0/0:18,0:18:52.64:0,53,1039	0/0:26,0:26:75.26:0,75,1673	0/0:27,0:27:81.28:0,81,1868	0/0:22,0:22:60.21:0,60,1366	0/0:27,0:27:75.25:0,75,1643	0/0:19,0:19:57.18:0,57,1270	0/0:30,0:30:90.31:0,90,2077	0/0:25,0:25:72.25:0,72,1657	0/0:17,0:17:51.14:0,51,767	0/0:23,0:23:69.20:0,69,1063	0/0:28,0:28:78.19:0,78,1128	0/0:25,0:25:75.24:0,75,1686	0/0:21,0:21:63.21:0,63,1410	0/0:29,0:29:84.29:0,84,1937	1/1:3,14:17:42.14:702,42,0	0/0:18,0:18:51.18:0,51,1157	0/0:29,0:29:87.30:0,87,2009	0/0:29,0:29:87.30:0,87,1971	0/0:16,0:16:45.15:0,45,711	0/0:25,0:25:66.22:0,66,1007	0/0:22,0:22:57.19:0,57,879	0/0:19,0:19:57.20:0,57,1296	1/1:3,25:28:72.24:1204,72,0	0/0:14,0:14:42.13:0,42,924	1/1:1,7:8:21.07:351,21,0
chr10	79730875	.	CT	C	4820.68	PASS	AB=0.545;AC=19;AF=0.339;AN=56;BaseQRankSum=13.450;DP=556;FS=11.957;HRun=6;HaplotypeScore=65.5504;InbreedingCoeff=0.9173;MQ=83.06;MQ0=0;MQRankSum=-2.931;QD=27.24;ReadPosRankSum=2.500;VQSLOD=4.8244;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:34:87.22:935,87,0	0/0:8,0:8:24.08:0,24,316	0/0:19,0:18:33.06:0,33,400	0/0:14,0:14:36.08:0,36,437	0/0:20,0:20:51.17:0,51,671	0/0:21,0:21:60.18:0,60,773	0/0:20,0:20:54.14:0,54,667	0/0:31,0:31:87.26:0,87,1118	0/0:21,0:21:63.20:0,63,809	0/0:19,0:19:48.14:0,48,597	0/0:17,0:17:42.12:0,42,537	1/1:2,16:18:45.11:484,45,0	1/1:2,13:15:39.10:419,39,0	1/1:1,23:24:69.17:740,69,0	0/0:24,0:24:69.22:0,69,908	0/0:17,0:17:48.16:0,48,632	0/0:19,0:19:51.13:0,51,648	1/1:2,11:13:30.06:322,30,0	0/0:24,0:24:72.23:0,72,942	0/0:27,0:27:75.22:0,75,964	0/0:28,0:28:78.24:0,78,1012	1/1:5,8:13:27.04:282,27,0	1/1:2,11:13:33.08:351,33,0	1/1:1,21:22:66.16:703,66,0	0/0:20,0:20:60.17:0,60,760	0/1:3,15:18:27.84:424,0,28	0/0:30,0:30:87.27:0,87,1128	1/1:1,6:7:15.04:161,15,0
chr10	79731107	.	GAAA	G	5408.01	PASS	AB=0.600;AC=19;AF=0.339;AN=56;BaseQRankSum=12.809;DP=651;FS=16.140;HRun=12;HaplotypeScore=162.6657;InbreedingCoeff=0.8914;MQ=68.58;MQ0=0;MQRankSum=-2.697;QD=25.63;ReadPosRankSum=6.061;VQSLOD=1.8311;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:60.16:752,60,0	0/0:8,0:9:21.06:0,21,366	0/0:26,0:20:39.40:0,39,567	0/0:19,0:15:26.46:0,26,355	0/0:27,0:28:81.28:0,81,1537	0/0:5,0:23:36.12:0,36,532	0/0:17,0:19:51.14:0,51,888	0/0:42,0:44:97.97:0,98,1718	0/0:23,0:23:57.18:0,57,1044	0/0:20,0:24:54.17:0,54,927	0/0:21,0:21:60.18:0,60,1136	1/1:1,14:15:42.11:518,42,0	1/1:2,27:29:63.19:796,63,0	1/1:2,21:23:57.17:720,57,0	0/0:23,0:24:66.19:0,66,1170	0/0:15,0:17:42.12:0,42,755	0/0:23,0:27:78.17:0,78,1342	0/1:5,0:15:35.04:74,0,35	0/0:26,0:26:69.18:0,69,1185	0/0:30,0:34:90.23:0,90,1500	0/0:13,0:15:42.09:0,42,722	1/1:5,20:25:44.03:589,44,0	1/1:0,24:24:69.21:865,69,0	1/1:1,22:23:54.17:682,54,0	0/0:5,0:25:20.91:0,21,47	1/1:3,0:27:66.73:394,67,0	0/0:32,0:35:84.22:0,84,1507	1/1:1,0:3:2.94:18,3,0
chr10	79731494	.	CGATTAA	C	1692.18	PASS	AB=0.538;AC=5;AF=0.089;AN=56;BaseQRankSum=5.214;DP=665;FS=10.229;HRun=0;HaplotypeScore=143.5297;InbreedingCoeff=0.7347;MQ=87.36;MQ0=0;MQRankSum=-6.860;QD=41.27;ReadPosRankSum=0.105;VQSLOD=2.7962;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.15:0,51,1696	0/0:13,0:13:30.10:0,30,1045	0/0:21,0:21:50.49:0,50,1405	0/0:26,0:26:59.35:0,59,1838	0/0:35,0:35:99:0,99,3350	0/0:33,0:33:93.32:0,93,3121	0/0:18,0:18:54.19:0,54,1878	0/0:38,0:38:93.31:0,93,3059	0/0:21,0:21:54.17:0,54,1791	0/0:41,0:41:99:0,102,3423	0/0:21,0:21:63.22:0,63,2102	0/0:25,0:25:75.26:0,75,2528	0/0:21,0:21:54.18:0,54,1818	0/0:20,0:20:54.19:0,54,1748	0/0:31,0:31:87.28:0,87,2861	0/0:21,0:21:60.21:0,60,2052	0/0:23,0:23:66.21:0,66,2105	1/1:3,6:9:9.03:205,9,0	0/0:26,0:26:66.16:0,66,1927	0/0:37,0:37:99:0,105,3456	0/0:15,0:15:39.12:0,39,1250	0/0:21,0:21:60.19:0,60,1843	0/0:24,0:24:66.12:0,66,1926	0/0:12,0:12:33.11:0,33,1149	0/0:29,0:29:87.30:0,87,2892	0/1:4,24:28:35.47:1332,0,35	0/0:33,0:33:90.29:0,90,2872	1/1:0,4:4:12.04:273,12,0
chr10	79732898	.	C	CA	7279.24	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.989;DP=620;FS=0.000;HRun=1;HaplotypeScore=88.4547;InbreedingCoeff=0.9982;MQ=88.52;MQ0=0;MQRankSum=-1.813;QD=39.78;ReadPosRankSum=3.779;VQSLOD=5.2469;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:99:1484,99,0	0/0:10,0:10:30.10:0,30,389	0/0:22,0:22:58.33:0,58,685	0/0:26,0:26:61.02:0,61,725	0/0:29,0:29:87.28:0,87,1129	0/0:27,0:27:78.24:0,78,999	0/0:18,0:18:54.16:0,54,686	0/0:22,0:22:66.21:0,66,857	0/0:21,0:21:63.20:0,63,818	0/0:25,0:25:69.22:0,69,896	0/0:17,0:17:48.16:0,48,623	1/1:1,15:16:45.15:675,45,0	1/1:3,22:25:69.23:1030,69,0	1/1:1,16:17:45.15:674,45,0	0/0:27,0:27:81.26:0,81,1052	0/0:18,0:18:54.18:0,54,701	0/0:24,0:24:72.23:0,72,935	0/0:13,0:13:39.13:0,39,505	0/0:19,0:19:51.17:0,51,662	0/0:31,0:31:87.27:0,87,1115	0/0:35,0:35:99:0,105,1361	1/1:2,23:25:60.20:899,60,0	1/1:0,41:41:99:1709,114,0	1/1:1,20:21:54.18:809,54,0	0/0:9,0:9:27.05:0,27,310	0/0:17,0:17:48.11:0,48,604	0/0:21,0:21:60.18:0,60,762	0/0:6,0:6:18.06:0,18,234
chr10	79733107	.	A	AT	4806.81	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=16.693;DP=610;FS=7.287;HRun=6;HaplotypeScore=88.6009;InbreedingCoeff=0.9731;MQ=70.63;MQ0=0;MQRankSum=0.033;QD=30.81;ReadPosRankSum=3.163;VQSLOD=5.1894;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:60.19:754,60,0	0/0:10,0:10:27.06:0,27,275	0/0:24,0:22:42.07:0,42,415	0/0:15,0:14:29.79:0,30,287	0/0:36,0:36:99:0,99,999	0/0:38,0:38:99:0,102,1026	0/0:22,0:22:63.14:0,63,643	0/0:37,0:37:90.19:0,90,913	0/0:28,0:28:69.13:0,69,696	0/0:30,0:30:81.18:0,81,826	0/0:19,0:19:54.11:0,54,544	1/1:0,19:19:45.14:562,45,0	1/1:5,22:27:60.19:750,60,0	1/1:3,22:25:66.21:830,66,0	0/0:19,0:19:57.13:0,57,581	0/0:18,0:18:54.09:0,54,537	0/0:28,0:28:81.18:0,81,826	0/0:4,0:4:6.01:0,6,61	0/0:25,0:23:60.13:0,60,612	0/0:31,0:31:84.17:0,84,851	0/0:5,0:5:12.03:0,12,122	1/1:1,21:22:57.17:704,57,0	1/1:1,22:23:57.18:716,57,0	1/1:2,14:16:39.12:490,39,0	0/0:20,0:20:57.11:0,57,572	0/0:7,0:7:18.04:0,18,182	0/0:30,0:30:72.13:0,72,727	0/0:8,0:8:21.05:0,21,214
chr10	79733476	.	C	CAAGG	10299.60	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=1.970;DP=760;FS=1.118;HRun=0;HaplotypeScore=130.9302;InbreedingCoeff=0.9999;MQ=81.15;MQ0=0;MQRankSum=-6.194;QD=58.52;ReadPosRankSum=2.632;VQSLOD=6.6977;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,30:42:90.31:2359,90,0	0/0:11,0:11:30.10:0,30,570	0/0:32,0:33:89.11:0,89,1570	0/0:17,0:17:35.11:0,35,674	0/0:30,0:30:75.26:0,75,1423	0/0:23,0:23:63.20:0,63,1164	0/0:35,0:35:96.33:0,96,1790	0/0:36,0:36:99:0,99,1875	0/0:23,0:23:69.24:0,69,1293	0/0:30,0:30:81.26:0,81,1500	0/0:25,0:25:69.24:0,69,1291	1/1:7,14:22:45.15:1127,45,0	1/1:4,18:24:51.13:1287,51,0	1/1:3,17:22:51.18:1326,51,0	0/0:31,0:31:84.27:0,84,1563	0/0:33,0:33:96.32:0,96,1791	0/0:30,0:30:81.28:0,81,1524	0/0:21,0:21:57.15:0,57,1045	0/0:31,0:31:84.29:0,84,1595	0/0:26,0:26:72.25:0,72,1366	0/0:51,0:51:99:0,138,2533	1/1:3,14:17:48.16:1242,48,0	1/1:5,21:27:69.24:1737,69,0	1/1:7,15:22:48.16:1222,48,0	0/0:23,0:23:60.21:0,60,1139	0/0:23,0:23:63.22:0,63,1196	0/0:33,0:33:96.29:0,96,1771	0/0:19,0:19:54.16:0,54,990
chr10	79733886	.	TCTGA	T	6837.30	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=16.431;DP=690;FS=4.953;HRun=0;HaplotypeScore=129.5094;InbreedingCoeff=0.9981;MQ=69.92;MQ0=0;MQRankSum=-11.029;QD=46.20;ReadPosRankSum=5.369;VQSLOD=5.5414;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:63.17:1096,63,0	0/0:6,0:6:18.06:0,18,472	0/0:32,0:32:81.23:0,81,1972	0/0:27,0:28:72.11:0,72,1630	0/0:31,0:31:81.26:0,81,2035	0/0:29,0:29:84.29:0,84,2200	0/0:23,0:23:63.20:0,63,1571	0/0:33,0:33:93.27:0,93,2134	0/0:29,0:29:87.28:0,87,2165	0/0:31,0:31:87.30:0,87,2273	0/0:24,0:24:69.22:0,69,1737	1/1:4,24:28:66.23:1200,66,0	1/1:1,21:22:66.23:1196,66,0	1/1:2,18:20:51.17:927,51,0	0/0:39,0:39:99:0,111,2862	0/0:25,0:25:72.25:0,72,1857	0/0:27,0:27:75.24:0,75,1910	0/0:18,0:18:51.15:0,51,1216	0/0:21,0:21:54.19:0,54,1408	0/0:22,0:22:54.19:0,54,1337	0/0:25,0:25:75.26:0,75,1893	1/1:2,22:23:60.21:1090,60,0	1/1:1,17:18:51.13:893,51,0	1/1:1,12:13:24.08:436,24,0	0/0:25,0:25:66.20:0,66,1646	0/0:21,0:21:57.20:0,57,1494	0/0:42,0:42:99:0,126,3154	0/0:11,0:11:33.11:0,33,832
chr10	79733958	.	GAGA	G	4051.44	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.544;DP=613;FS=38.434;HRun=0;HaplotypeScore=104.6333;InbreedingCoeff=0.9796;MQ=84.15;MQ0=0;MQRankSum=-13.512;QD=48.81;ReadPosRankSum=0.638;VQSLOD=2.3974;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:33.03:539,33,0	0/0:10,0:10:27.09:0,27,666	0/0:26,0:26:78.27:0,78,1813	0/0:23,0:23:45.51:0,46,1271	0/0:26,0:26:78.27:0,78,1917	0/0:31,0:30:93.32:0,93,2241	0/0:34,0:34:99:0,102,2453	0/0:31,0:31:90.30:0,90,2134	0/0:29,0:29:87.30:0,87,2117	0/0:28,0:28:84.29:0,84,2035	0/0:23,0:23:60.21:0,60,1416	1/1:0,12:12:33.11:614,33,0	1/1:0,14:14:39.13:726,39,0	1/1:0,17:17:48.16:889,48,0	0/0:28,0:28:84.29:0,84,2070	0/0:42,0:42:99:0,126,3100	0/0:24,0:24:72.25:0,72,1738	0/0:7,0:7:21.07:0,21,493	0/0:21,0:21:63.20:0,63,1486	0/0:27,0:27:81.28:0,81,1994	0/0:28,0:28:84.29:0,84,2062	1/1:0,13:12:33.11:614,33,0	1/1:1,10:11:30.10:558,30,0	1/1:0,4:4:6.02:112,6,0	0/0:20,0:20:60.21:0,60,1476	0/0:26,0:26:78.27:0,78,1922	0/0:32,0:32:96.33:0,96,2366	0/0:14,0:14:42.14:0,42,1009
chr10	79733980	.	C	CTAATG	7477.38	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.515;DP=602;FS=27.637;HRun=0;HaplotypeScore=129.0955;InbreedingCoeff=0.9946;MQ=87.50;MQ0=0;MQRankSum=-14.475;QD=74.03;ReadPosRankSum=-1.132;VQSLOD=3.5352;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,9:13:36.09:956,36,0	0/0:11,0:11:27.09:0,27,548	0/0:21,0:21:57.12:0,57,1031	0/0:27,0:27:55.96:0,56,1231	0/0:21,0:21:57.19:0,57,1152	0/0:27,0:26:81.26:0,81,1641	0/0:35,0:35:93.30:0,93,1879	0/0:27,0:27:78.26:0,78,1560	0/0:24,0:24:57.20:0,57,1165	0/0:31,0:31:90.29:0,90,1781	0/0:20,0:20:48.15:0,48,942	1/1:5,13:18:48.16:1381,48,0	1/1:4,16:20:54.18:1544,54,0	1/1:7,12:19:48.16:1322,48,0	0/0:25,0:25:66.19:0,66,1308	0/0:36,0:36:99:0,105,2155	0/0:23,0:23:63.22:0,63,1306	0/0:7,0:7:21.07:0,21,435	0/0:14,0:14:33.10:0,33,634	0/0:31,0:31:84.25:0,84,1629	0/0:31,0:31:81.26:0,81,1640	1/1:2,14:15:45.15:1299,45,0	1/1:2,6:8:18.06:517,18,0	1/1:2,5:7:15.05:459,15,0	0/0:25,0:25:75.26:0,75,1545	0/0:24,0:24:72.22:0,72,1420	0/0:24,0:24:66.23:0,66,1344	0/0:17,0:17:51.17:0,51,1034
chr10	79734167	.	GA	G	4456.73	PASS	AB=0.519;AC=19;AF=0.339;AN=56;BaseQRankSum=14.758;DP=480;FS=1.840;HRun=1;HaplotypeScore=64.7522;InbreedingCoeff=0.9235;MQ=75.45;MQ0=1;MQRankSum=-8.184;QD=35.94;ReadPosRankSum=4.437;VQSLOD=5.1606;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:23:57.19:794,57,0	0/0:3,0:3:9.03:0,9,144	0/0:24,0:22:60.95:0,61,899	0/0:21,0:17:16.21:0,16,598	0/0:19,0:19:54.17:0,54,837	0/0:14,0:14:42.14:0,42,671	0/0:24,0:24:66.13:0,66,977	0/0:24,0:24:72.23:0,72,1109	0/0:21,0:21:60.20:0,60,959	0/0:27,0:27:81.28:0,81,1292	0/0:13,0:13:36.11:0,36,552	1/1:0,17:17:45.15:620,45,0	1/1:0,13:12:33.11:456,33,0	1/1:0,7:7:18.06:251,18,0	0/0:26,0:26:78.25:0,78,1221	0/0:17,0:17:51.16:0,51,785	0/0:27,0:27:78.24:0,78,1218	1/1:0,9:9:24.08:335,24,0	0/0:18,0:18:54.14:0,54,788	0/0:24,0:24:72.23:0,72,1118	0/0:27,0:27:81.22:0,81,1240	1/1:0,11:11:27.09:377,27,0	1/1:0,9:9:27.09:368,27,0	1/1:0,8:8:18.06:250,18,0	0/0:12,0:12:35.99:0,36,518	0/1:1,13:14:5.83:503,0,6	0/0:15,0:15:45.15:0,45,719	1/1:0,12:12:36.12:503,36,0
chr10	79734323	.	GGGA	G	571.71	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=6.618;DP=265;FS=2.662;HRun=0;HaplotypeScore=34.8757;InbreedingCoeff=0.8289;MQ=54.56;MQ0=14;MQRankSum=-6.650;QD=19.71;ReadPosRankSum=0.825;VQSLOD=2.9425;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:4:5.98:67,6,0	0/0:3,0:3:9.03:0,9,195	0/0:19,0:7:20.90:0,21,328	0/0:14,0:3:9:0,9,152	0/0:12,0:12:33.10:0,33,583	0/0:7,0:7:21.06:0,21,394	0/0:12,0:12:24.07:0,24,472	0/0:13,0:8:21.07:0,21,446	0/0:10,0:10:30.09:0,30,584	0/0:18,0:17:42.13:0,42,843	0/0:10,0:10:24.08:0,24,514	1/1:2,8:10:22.89:331,23,0	1/1:3,3:6:9.03:141,9,0	1/1:1,1:2:3.01:47,3,0	0/0:12,0:11:30.10:0,30,640	0/0:12,0:12:30.09:0,30,610	0/0:14,0:14:33.11:0,33,714	0/0:6,0:6:15.05:0,15,325	0/0:8,0:7:18.03:0,18,301	0/0:9,0:9:24.08:0,24,510	0/0:17,0:17:36.11:0,36,730	1/1:2,4:6:6.02:94,6,0	1/1:0,1:1:3.01:47,3,0	./.	0/0:11,0:11:30.10:0,30,650	0/0:8,0:8:24.07:0,24,467	0/0:13,0:13:36.10:0,36,690	0/0:7,0:6:18.06:0,18,385
chr10	79734429	.	C	CT	1877.42	PASS	AB=0.573;AC=12;AF=0.231;AN=52;BaseQRankSum=8.779;DP=364;FS=3.202;HRun=0;HaplotypeScore=49.0611;InbreedingCoeff=0.7350;MQ=49.40;MQ0=34;MQRankSum=-2.884;QD=24.38;ReadPosRankSum=-0.155;VQSLOD=4.5543;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:21:51.17:805,51,0	0/0:4,0:4:12.04:0,12,168	./.	./.	0/0:15,0:15:45.15:0,45,622	0/0:17,0:16:45.08:0,45,587	0/0:12,0:11:33.11:0,33,461	0/0:24,0:17:48.11:0,48,615	0/0:13,0:13:39.12:0,39,528	0/0:15,0:15:45.14:0,45,615	0/0:10,0:9:24.07:0,24,319	1/1:2,4:5:5.91:96,6,0	0/1:2,10:8:20.69:261,0,21	1/1:2,7:9:18.06:275,18,0	0/0:12,0:12:36.07:0,36,480	0/0:8,0:8:21.07:0,21,293	0/0:33,0:31:87.27:0,87,1197	0/0:16,0:9:27.04:0,27,354	0/0:10,0:9:24.08:0,24,336	0/0:19,0:18:54.17:0,54,739	0/0:15,0:15:45.15:0,45,627	1/1:0,6:5:9.03:143,9,0	1/1:0,12:11:21.07:335,21,0	0/1:3,6:5:29.67:132,0,30	0/0:14,0:14:36.12:0,36,503	0/0:18,0:17:51.16:0,51,696	0/0:8,0:8:24.08:0,24,334	0/0:14,0:13:36.12:0,36,503
chr10	79734552	.	CGT	C	478.02	PASS	AB=0.863;AC=26;AF=0.542;AN=48;BaseQRankSum=5.253;DP=539;FS=0.850;HRun=0;HaplotypeScore=103.7531;InbreedingCoeff=0.0800;MQ=52.22;MQ0=28;MQRankSum=-1.161;QD=1.58;ReadPosRankSum=0.472;VQSLOD=2.0757;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:0:0,0,0	0/1:5,1:6:23.31:23,0,57	./.	./.	0/0:10,0:10:3.01:0,3,44	1/1:10,0:11:5.68:28,6,0	0/1:31,4:36:89.12:89,0,253	./.	0/1:12,4:17:37.96:38,0,247	0/1:19,1:20:23.31:23,0,56	0/0:12,0:12:6.01:0,6,68	1/1:3,0:6:3.31:15,3,0	1/1:10,0:15:5.68:28,6,0	0/1:12,0:16:0:0,0,0	0/1:14,2:14:17.31:17,0,138	0/0:13,0:12:9.03:0,9,132	0/1:34,2:37:58.64:59,0,376	1/1:11,0:12:5.68:28,6,0	1/1:14,2:14:6.01:65,6,0	0/0:19,0:18:9.03:0,9,132	0/1:20,4:23:99:108,0,112	1/1:16,0:18:2.84:14,3,0	1/1:12,0:14:2.68:11,3,0	0/0:23,0:24:0:0,0,0	1/1:13,0:15:7.88:46,8,0	1/1:16,0:17:5.68:28,6,0	0/0:19,0:18:15.03:0,15,192	./.
chr10	79734711	.	AG	A	1941.07	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.182;DP=590;FS=1.155;HRun=1;HaplotypeScore=71.8883;InbreedingCoeff=0.9990;MQ=75.06;MQ0=0;MQRankSum=-1.163;QD=35.95;ReadPosRankSum=0.674;VQSLOD=3.9077;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,2062	0/0:8,0:8:24.08:0,24,383	0/0:28,0:28:81.25:0,81,1162	0/0:28,0:28:84.28:0,84,1293	0/0:18,0:18:54.18:0,54,860	0/0:26,0:26:78.27:0,78,1239	0/0:30,0:30:72.24:0,72,1347	0/0:27,0:27:78.25:0,78,1202	0/0:22,0:22:63.20:0,63,970	0/0:16,0:16:48.16:0,48,764	0/0:11,0:11:33.11:0,33,520	0/0:13,0:13:39.13:0,39,622	0/0:26,0:26:75.26:0,75,1194	0/0:26,0:26:78.27:0,78,1244	0/0:21,0:21:63.20:0,63,976	0/0:11,0:11:33.11:0,33,527	0/0:26,0:26:75.19:0,75,1119	1/1:0,15:15:39.13:540,39,0	0/0:17,0:17:51.15:0,51,766	0/0:14,0:14:42.14:0,42,666	0/0:34,0:34:99:0,99,1557	0/0:16,0:16:48.14:0,48,737	0/0:19,0:19:57.16:0,57,871	0/0:15,0:15:45.15:0,45,718	0/0:14,0:14:42.14:0,42,671	1/1:0,24:24:72.18:957,72,0	0/0:25,0:25:75.20:0,75,1140	1/1:0,15:15:42.14:587,42,0
chr10	79734864	.	AT	A	1134.56	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.096;DP=646;FS=6.893;HRun=1;HaplotypeScore=86.8512;InbreedingCoeff=0.9936;MQ=92.74;MQ0=0;MQRankSum=-3.010;QD=33.37;ReadPosRankSum=2.157;VQSLOD=3.1573;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1512	0/0:7,0:7:21.07:0,21,336	0/0:26,0:26:69.68:0,70,1078	0/0:31,0:31:93.27:0,93,1414	0/0:23,0:23:63.20:0,63,983	1/1:2,32:34:97.17:1229,97,0	0/0:20,0:20:57.17:0,57,886	0/0:20,0:20:60.19:0,60,938	0/0:29,0:29:87.28:0,87,1366	0/0:35,0:35:99:0,105,1644	0/0:18,0:18:51.17:0,51,812	0/0:15,0:15:45.15:0,45,718	0/0:21,0:21:63.20:0,63,980	0/0:29,0:29:87.28:0,87,1362	0/0:20,0:20:60.20:0,60,957	0/0:20,0:20:60.20:0,60,959	0/0:21,0:21:63.18:0,63,957	0/0:8,0:8:24.08:0,24,383	0/0:26,0:26:78.25:0,78,1211	0/0:26,0:26:75.24:0,75,1173	0/0:29,0:29:84.25:0,84,1281	0/0:27,0:27:81.23:0,81,1196	0/0:36,0:36:99:0,105,1634	0/0:11,0:11:33.11:0,33,527	0/0:18,0:18:51.17:0,51,802	0/0:28,0:28:84.25:0,84,1276	0/0:22,0:22:66.19:0,66,994	0/0:12,0:12:36.06:0,36,501
chr10	79735729	.	G	GTTTA	6394.60	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.990;DP=521;FS=3.929;HRun=0;HaplotypeScore=108.1356;InbreedingCoeff=0.9742;MQ=74.68;MQ0=0;MQRankSum=-14.376;QD=61.49;ReadPosRankSum=-1.224;VQSLOD=6.2437;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,8:12:27.09:654,27,0	0/0:3,0:3:9.03:0,9,168	0/0:15,0:15:33.09:0,33,520	0/0:12,0:12:20.93:0,21,273	0/0:26,0:26:75.24:0,75,1360	0/0:16,0:16:42.13:0,42,751	0/0:17,0:17:51.17:0,51,950	0/0:38,0:38:99:0,105,1871	0/0:22,0:22:57.20:0,57,1053	0/0:26,0:26:66.23:0,66,1219	0/0:24,0:24:72.25:0,72,1326	1/1:2,5:7:15.05:394,15,0	1/1:5,12:17:45.15:1166,45,0	1/1:8,13:21:54.17:1271,54,0	0/0:18,0:18:54.19:0,54,1000	0/0:25,0:25:69.24:0,69,1288	0/0:13,0:13:39.13:0,39,719	0/0:18,0:18:48.13:0,48,856	0/0:21,0:21:51.14:0,51,858	0/0:24,0:24:72.25:0,72,1343	0/0:7,0:7:21.07:0,21,392	1/1:3,14:17:51.17:1276,51,0	1/1:10,14:24:57.20:1396,57,0	1/1:5,1:6:9.03:236,9,0	0/0:18,0:18:48.15:0,48,863	0/0:30,0:30:90.29:0,90,1619	0/0:31,0:31:90.31:0,90,1670	0/0:13,0:13:39.13:0,39,719
chr10	79736084	.	G	GAA	2937.61	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=4.080;DP=559;FS=0.863;HRun=10;HaplotypeScore=80.1993;InbreedingCoeff=0.9202;MQ=76.09;MQ0=0;MQRankSum=-0.467;QD=21.13;ReadPosRankSum=1.216;VQSLOD=2.9984;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:20:33.02:125,33,0	0/0:7,0:7:15.02:0,15,152	0/0:17,0:18:27.19:0,27,294	0/1:13,0:13:5.58:6,0,78	0/0:30,0:30:84.14:0,84,851	0/0:25,0:25:75.15:0,75,755	0/0:19,0:20:53.65:0,54,507	0/0:34,0:34:81.10:0,81,816	0/0:15,0:16:35.81:0,36,417	0/0:26,0:28:53.85:0,54,625	0/0:22,0:22:54.11:0,54,548	1/1:1,12:15:33.98:462,34,0	1/1:0,15:16:42.14:610,42,0	1/1:6,17:25:41.63:588,42,0	0/0:12,0:13:26.79:0,27,326	0/0:17,0:19:35.53:0,36,463	0/0:18,0:18:42.03:0,42,424	0/0:2,0:15:33.10:0,33,148	0/0:23,0:24:25.35:0,25,437	0/0:24,0:24:44.10:0,44,578	0/0:11,0:12:32.81:0,33,316	1/1:1,15:18:41.58:549,42,0	1/1:5,19:24:42.14:626,42,0	1/1:0,6:8:14.53:171,15,0	0/0:27,0:28:65.86:0,66,722	0/0:3,0:27:65.91:0,66,286	0/0:32,0:32:90.18:0,90,915	0/0:0,0:8:19.21:0,19,83
chr10	79736228	.	C	CAGGTACTTGTGTCTGTCTCTAGGA	22062	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=2.715;DP=595;FS=1.413;HRun=0;HaplotypeScore=343.9774;InbreedingCoeff=0.9750;MQ=77.97;MQ0=0;MQRankSum=-13.388;QD=183.85;ReadPosRankSum=2.106;VQSLOD=4.2445;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,4:29:57:4107,57,0	0/0:6,0:6:18.06:0,18,1205	0/0:21,0:22:42.33:0,42,1401	0/0:9,0:9:8.84:0,9,162	0/0:29,0:29:87.21:0,87,5025	0/0:25,0:25:72.20:0,72,3467	0/0:22,0:22:63.20:0,63,3440	0/0:30,0:30:87.28:0,87,3817	0/0:22,0:22:66.21:0,66,3704	0/0:23,0:23:66.22:0,66,3578	0/0:25,0:25:75.24:0,75,4387	1/1:7,5:15:33.05:2933,33,0	1/1:11,8:25:57.20:5769,57,0	1/1:10,3:18:42.14:3735,42,0	0/0:29,0:29:87.30:0,87,5156	0/0:24,0:24:72.21:0,72,3941	0/0:21,0:20:60.21:0,60,3097	0/0:9,0:9:27.09:0,27,1225	0/0:19,0:19:57.20:0,57,2736	0/0:31,0:31:90.27:0,90,5237	0/0:31,0:31:90.25:0,90,4983	1/1:2,4:7:18.06:1786,18,0	1/1:7,4:13:29.76:2972,30,0	1/1:10,1:13:8.99:760,9,0	0/0:31,0:31:87.26:0,87,5437	0/0:26,0:26:75.21:0,75,4277	0/0:30,0:30:87.30:0,87,4989	0/0:11,0:11:33.11:0,33,2014
chr10	79736570	.	A	ATG	7935	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=6.448;DP=656;FS=5.203;HRun=0;HaplotypeScore=109.2039;InbreedingCoeff=0.9993;MQ=69.21;MQ0=0;MQRankSum=-4.120;QD=38.15;ReadPosRankSum=5.910;VQSLOD=7.0256;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,30:38:72.25:1197,72,0	0/0:7,0:7:21.07:0,21,299	0/0:19,0:20:53.75:0,54,670	0/0:21,0:20:60.02:0,60,795	0/0:35,0:35:99:0,105,1423	0/0:26,0:26:72.24:0,72,1030	0/0:25,0:25:72.18:0,72,954	0/0:23,0:23:60.18:0,60,808	0/0:30,0:30:84.28:0,84,1195	0/0:29,0:29:81.24:0,81,1097	0/0:23,0:23:69.13:0,69,944	1/1:2,16:18:39.13:652,39,0	1/1:2,18:20:48.16:803,48,0	1/1:3,15:19:36.12:601,36,0	0/0:33,0:33:93.27:0,93,1277	0/0:28,0:28:84.27:0,84,1184	0/0:34,0:34:99:0,102,1374	1/1:0,17:17:42.14:770,42,0	0/0:19,0:19:48.16:0,48,682	0/0:25,0:25:75.25:0,75,1070	0/0:18,0:18:48.09:0,48,610	1/1:1,12:13:33.11:551,33,0	1/1:10,12:22:34.86:573,35,0	1/1:4,15:19:36.12:602,36,0	0/0:28,0:28:78.21:0,78,1059	1/1:0,25:25:75.26:1363,75,0	0/0:23,0:23:69.21:0,69,969	1/1:1,16:17:45.15:825,45,0
chr10	79737364	.	ATTTATTTATTAATTATTAAATAAATTTATTTAAAAC	A	1635.69	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=4.717;DP=197;FS=21.583;HRun=0;HaplotypeScore=165.6027;InbreedingCoeff=0.6641;MQ=76.03;MQ0=0;MQRankSum=-2.475;QD=71.12;ReadPosRankSum=1.780;VQSLOD=1.3759;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:6:3.01:286,3,0	0/0:2,0:2:6.02:0,6,636	0/0:3,0:3:9.03:0,9,195	0/0:6,0:6:12.51:0,13,303	0/0:7,0:7:21.06:0,21,2517	0/0:12,0:12:36.12:0,36,4938	0/0:4,0:4:12.04:0,12,1072	0/0:42,0:42:99:0,126,9966	0/0:7,0:7:21.07:0,21,2722	0/0:10,0:10:30.10:0,30,3317	0/0:3,0:3:9.03:0,9,748	1/1:0,3:3:3.01:286,3,0	./.	1/1:0,1:1:3.01:286,3,0	0/0:9,0:9:27.08:0,27,1979	0/0:5,0:5:15.05:0,15,1986	0/0:14,0:14:42.14:0,42,6142	0/0:8,0:8:24.08:0,24,3118	0/0:14,0:14:39.13:0,39,4677	0/0:3,0:3:9.03:0,9,1075	0/0:1,0:1:3.01:0,3,285	1/1:0,6:6:8.99:345,9,0	1/1:0,6:6:3.01:286,3,0	1/1:0,1:1:3.01:286,3,0	0/0:9,0:9:27.07:0,27,3244	0/0:6,0:6:18.06:0,18,1957	0/0:2,0:2:6.02:0,6,583	0/0:7,0:7:21.07:0,21,831
chr10	79737527	.	TTCTCC	T	2999.39	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.807;DP=574;FS=47.781;HRun=0;HaplotypeScore=96.3560;InbreedingCoeff=0.9798;MQ=67.78;MQ0=15;MQRankSum=-6.614;QD=42.24;ReadPosRankSum=2.957;VQSLOD=1.6934;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:22:36.12:754,36,0	0/0:5,0:5:15.04:0,15,358	0/0:106,0:47:92.37:0,92,1986	0/0:111,0:28:46.47:0,46,661	0/0:23,0:23:66.21:0,66,1867	0/0:17,0:17:48.16:0,48,1432	0/0:12,0:12:36.04:0,36,946	0/0:41,0:41:99:0,122,3287	0/0:10,0:10:30.10:0,30,896	0/0:15,0:15:42.14:0,42,1205	0/0:13,0:13:36.12:0,36,1080	1/1:0,5:5:12.04:256,12,0	1/1:0,10:10:27.09:575,27,0	1/1:0,8:8:15.05:320,15,0	0/0:10,0:10:30.10:0,30,891	0/0:8,0:8:24.08:0,24,667	0/0:13,0:13:39.13:0,39,1125	0/0:17,0:16:45.15:0,45,1307	0/0:15,0:15:45.14:0,45,1250	0/0:13,0:13:36.12:0,36,1104	0/0:8,0:8:24.08:0,24,727	1/1:3,10:13:33.11:675,33,0	1/1:1,6:7:18.06:383,18,0	1/1:0,5:5:12.04:231,12,0	0/0:23,0:23:66.20:0,66,1711	0/0:16,0:16:45.15:0,45,1325	0/0:10,0:10:24.08:0,24,685	0/0:17,0:17:48.16:0,48,1455
chr10	79738791	.	G	GA	4370.94	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=6.386;DP=604;FS=2.222;HRun=7;HaplotypeScore=69.9172;InbreedingCoeff=0.9120;MQ=58.69;MQ0=6;MQRankSum=0.943;QD=25.86;ReadPosRankSum=3.625;VQSLOD=5.5548;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,39:41:95.93:1191,96,0	0/0:13,0:13:33.05:0,33,319	0/1:17,0:7:12.96:13,0,23	0/0:18,0:14:18.39:0,18,154	0/0:31,0:31:78.04:0,78,727	0/0:25,0:25:63.09:0,63,608	0/0:11,0:11:30.03:0,30,283	0/0:25,0:25:60.07:0,60,574	0/0:19,0:19:57.09:0,57,550	0/0:25,0:25:69.11:0,69,666	0/0:23,0:23:60.01:0,60,559	1/1:1,13:14:39.12:471,39,0	1/1:1,13:14:30.09:362,30,0	1/1:1,17:18:45.14:544,45,0	0/0:19,0:19:45.06:0,45,434	0/0:25,0:25:72.09:0,72,684	0/0:34,0:35:84.12:0,84,810	0/0:17,0:17:51.03:0,51,482	0/0:24,0:20:57.08:0,57,545	0/0:27,0:27:78.11:0,78,747	0/0:16,0:16:45.07:0,45,434	1/1:2,22:24:63.19:761,63,0	1/1:3,21:23:51.13:594,51,0	1/1:1,16:17:36.11:435,36,0	0/0:17,0:17:42.05:0,42,401	0/0:30,0:30:81.12:0,81,782	0/0:23,0:23:63.06:0,63,593	0/0:11,0:11:30.02:0,30,279
chr10	79739681	.	T	TTTA	5728.32	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.540;DP=541;FS=13.620;HRun=0;HaplotypeScore=100.9300;InbreedingCoeff=0.9854;MQ=79.28;MQ0=1;MQRankSum=-10.818;QD=53.04;ReadPosRankSum=-0.353;VQSLOD=6.3380;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:22:48.16:1105,48,0	0/0:8,0:8:24.06:0,24,385	0/0:25,0:20:39.46:0,39,635	0/0:17,0:16:17.99:0,18,329	0/0:30,0:30:87.25:0,87,1509	0/0:17,0:17:51.12:0,51,864	0/0:14,0:14:39.13:0,39,698	0/0:22,0:22:66.20:0,66,1082	0/0:17,0:17:51.16:0,51,861	0/0:18,0:18:54.05:0,54,774	0/0:24,0:24:72.24:0,72,1243	1/1:1,12:14:33.11:774,33,0	1/1:0,12:12:27.09:639,27,0	1/1:3,5:8:9.03:199,9,0	0/0:16,0:16:48.16:0,48,831	0/0:26,0:26:78.27:0,78,1349	0/0:24,0:24:69.23:0,69,1235	0/0:6,0:6:18.06:0,18,322	0/0:19,0:19:57.16:0,57,932	0/0:27,0:27:81.25:0,81,1363	0/0:12,0:12:36.12:0,36,630	1/1:0,20:22:63.13:1427,63,0	1/1:0,20:22:45.05:1019,45,0	1/1:0,8:8:24.08:565,24,0	0/0:26,0:26:78.21:0,78,1276	0/0:37,0:37:99:0,108,1832	0/0:30,0:30:90.26:0,90,1520	0/0:18,0:18:54.19:0,54,967
chr10	79740194	.	AG	A	2244.86	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.328;DP=619;FS=10.242;HRun=1;HaplotypeScore=78.5984;InbreedingCoeff=0.9981;MQ=80.02;MQ0=0;MQRankSum=-2.370;QD=36.80;ReadPosRankSum=1.148;VQSLOD=3.4842;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.22:0,72,1038	0/0:13,0:13:39.12:0,39,600	0/0:10,0:10:26.66:0,27,349	0/0:22,0:22:66.13:0,66,917	0/0:25,0:25:75.22:0,75,1151	0/0:23,0:23:69.20:0,69,1050	0/0:17,0:17:51.16:0,51,792	0/0:29,0:29:87.23:0,87,1276	0/0:17,0:17:51.05:0,51,758	0/0:27,0:27:81.25:0,81,1269	0/0:29,0:29:87.26:0,87,1318	0/0:14,0:14:42.12:0,42,593	0/0:27,0:27:81.27:0,81,1198	0/0:16,0:16:48.16:0,48,703	0/0:30,0:30:90.24:0,90,1394	0/0:17,0:17:51.14:0,51,767	0/0:26,0:26:78.24:0,78,1219	1/1:0,11:10:21.07:293,21,0	0/0:18,0:18:48.13:0,48,696	0/0:28,0:28:84.29:0,84,1338	0/0:20,0:20:60.20:0,60,956	0/0:28,0:28:84.27:0,84,1243	0/0:33,0:33:99:0,99,1437	0/0:22,0:22:66.20:0,66,935	0/0:14,0:14:42.14:0,42,671	1/1:0,31:31:93.31:1298,93,0	0/0:29,0:29:87.24:0,87,1356	1/1:0,19:19:57.19:796,57,0
chr10	79741073	.	G	GAACACCC	6269.73	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.538;DP=536;FS=131.250;HRun=0;HaplotypeScore=116.6773;InbreedingCoeff=0.9852;MQ=66.99;MQ0=2;MQRankSum=-11.471;QD=83.60;ReadPosRankSum=-0.253;VQSLOD=1.4431;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,8:15:36.12:1425,36,0	0/0:15,0:15:36.12:0,36,971	0/0:20,0:16:41.73:0,42,825	0/0:15,0:13:29.65:0,30,622	0/0:21,0:21:48.16:0,48,1201	0/0:23,0:23:54.16:0,54,1397	0/0:28,0:28:78.27:0,78,1907	0/0:42,0:42:99:0,117,3047	0/0:22,0:22:57.20:0,57,1536	0/0:25,0:24:72.25:0,72,1891	0/0:19,0:19:44.82:0,45,1212	1/1:1,4:6:15.05:610,15,0	1/1:2,6:10:18.06:735,18,0	1/1:1,5:7:15.05:609,15,0	0/0:26,0:26:66.23:0,66,1735	0/0:23,0:23:66.23:0,66,1695	0/0:28,0:28:54.13:0,54,1312	0/0:10,0:10:18.06:0,18,477	0/0:20,0:20:60.20:0,60,1541	0/0:24,0:23:60.21:0,60,1564	0/0:20,0:20:54.19:0,54,1444	1/1:4,8:13:30.10:1201,30,0	1/1:4,9:14:30.10:1203,30,0	1/1:5,4:8:12.04:487,12,0	0/0:21,0:21:54.16:0,54,1299	0/0:24,0:24:72.23:0,72,1792	0/0:25,0:25:69.24:0,69,1816	0/0:10,0:10:30.10:0,30,809
chr10	79741845	.	CGTGTGT	C	196.06	PASS	AB=0.930;AC=13;AF=0.260;AN=50;BaseQRankSum=4.213;DP=496;FS=1.215;HRun=0;HaplotypeScore=114.5065;InbreedingCoeff=0.1834;MQ=57.33;MQ0=12;MQRankSum=-0.640;QD=1.10;ReadPosRankSum=0.409;VQSLOD=2.2390;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:3.09:3,0,35	0/0:8,0:8:8.96:0,9,136	./.	./.	0/0:16,0:15:9.02:0,9,207	0/1:19,0:18:28.35:57,0,28	0/0:16,0:15:11.91:0,12,195	0/0:23,0:23:0:0,0,0	0/0:15,0:15:8.24:0,8,80	0/0:18,0:16:18.01:0,18,269	0/0:15,0:12:3:0,3,25	0/0:12,0:12:5.05:0,5,19	0/1:17,0:17:2.04:2,0,17	0/1:14,4:18:5.06:109,0,5	0/0:13,0:13:6.01:0,6,75	0/1:15,1:21:36.52:37,0,205	0/0:22,0:21:27.06:0,27,414	1/1:10,0:10:2.60:10,3,0	0/0:15,0:15:3.01:0,3,35	./.	0/0:30,0:30:29.88:0,30,348	0/1:10,1:11:17.99:29,0,18	0/0:15,0:14:2.99:0,3,24	1/1:19,0:18:11.38:62,11,0	0/0:13,0:13:12.02:0,12,150	0/1:29,0:29:0:0,0,0	0/0:19,0:19:14.77:0,15,192	1/1:4,0:3:1.90:16,2,0
chr10	79742927	.	T	TAA	4671.79	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=12.762;DP=581;FS=3.562;HRun=7;HaplotypeScore=89.5989;InbreedingCoeff=0.9247;MQ=77.54;MQ0=0;MQRankSum=-11.139;QD=33.85;ReadPosRankSum=-0.806;VQSLOD=4.6510;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,11:14:33.04:484,33,0	0/0:11,0:11:33.09:0,33,374	0/1:16,0:16:5.90:6,0,311	0/0:15,0:15:24.57:0,25,362	0/0:35,0:35:93.26:0,93,1084	0/0:20,0:20:54.16:0,54,629	0/0:10,0:10:27.06:0,27,302	0/0:34,0:34:78.19:0,78,898	0/0:20,0:20:51.15:0,51,594	0/0:38,0:38:99:0,102,1174	0/0:22,0:22:60.17:0,60,699	1/1:1,8:9:27.06:414,27,0	1/1:1,15:18:39.09:610,39,0	1/1:2,14:16:42.14:689,42,0	0/0:22,0:22:60.17:0,60,699	0/0:14,0:14:42.12:0,42,489	0/0:17,0:17:45.12:0,45,524	0/0:14,0:14:36.10:0,36,419	0/0:20,0:20:54.14:0,54,618	0/0:39,0:39:99:0,102,1167	0/0:9,0:9:21.06:0,21,245	1/1:6,21:27:63.13:974,63,0	1/1:2,26:28:75.21:1191,75,0	1/1:2,8:10:20.86:305,21,0	0/0:21,0:21:57.16:0,57,664	0/0:29,0:29:81.24:0,81,943	0/0:39,0:39:99:0,105,1222	0/0:14,0:14:39.11:0,39,454
chr10	79743573	.	C	CTTT	3452.16	PASS	AB=0.567;AC=13;AF=0.232;AN=56;BaseQRankSum=12.303;DP=549;FS=8.433;HRun=4;HaplotypeScore=89.7297;InbreedingCoeff=0.8925;MQ=87.26;MQ0=0;MQRankSum=-6.905;QD=29.51;ReadPosRankSum=0.199;VQSLOD=0.4911;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:19:51.05:815,51,0	0/0:9,0:9:27.07:0,27,392	0/0:27,0:26:57.15:0,57,807	0/0:25,0:25:67.90:0,68,928	0/0:34,0:34:96.31:0,96,1447	0/0:20,0:20:45.13:0,45,665	0/0:13,0:13:33.08:0,33,478	0/0:30,0:30:84.25:0,84,1218	0/0:15,0:15:42.14:0,42,644	0/0:25,0:25:63.21:0,63,966	0/0:23,0:23:63.21:0,63,965	0/1:4,12:17:2.70:291,0,3	1/1:4,14:18:15.05:320,15,0	1/1:6,3:10:16.12:236,16,0	0/0:15,0:15:42.14:0,42,642	0/0:14,0:14:39.10:0,39,553	0/0:17,0:16:51.12:0,51,713	0/0:9,0:9:24.04:0,24,325	0/0:18,0:18:45.14:0,45,668	0/0:29,0:29:84.23:0,84,1218	0/0:15,0:15:39.09:0,39,554	1/1:1,19:21:44.98:820,45,0	1/1:3,22:26:53.82:907,54,0	1/1:4,2:6:2.53:63,3,0	0/0:25,0:25:72.24:0,72,1093	0/0:19,0:19:51.15:0,51,757	0/0:30,0:30:84.23:0,84,1219	0/0:20,0:20:54.18:0,54,823
chr10	79743834	.	AGAG	A	898.77	PASS	AB=0.688;AC=5;AF=0.089;AN=56;BaseQRankSum=2.818;DP=662;FS=1.589;HRun=0;HaplotypeScore=119.7419;InbreedingCoeff=0.6768;MQ=52.57;MQ0=107;MQRankSum=2.180;QD=12.48;ReadPosRankSum=0.559;VQSLOD=3.5158;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:19:26.22:0,26,179	0/0:9,0:8:21.07:0,21,425	0/0:20,0:12:31.80:0,32,457	0/0:14,0:10:12.16:0,12,206	0/0:32,0:29:60.18:0,60,1126	0/0:27,0:23:48.01:0,48,522	0/0:19,0:16:38.33:0,38,648	0/0:33,0:26:45.11:0,45,785	0/0:16,0:11:27.08:0,27,490	0/0:32,0:25:66.13:0,66,1173	0/0:30,0:26:60.12:0,60,1166	0/0:8,0:5:3.01:0,3,32	0/0:9,0:7:8.83:0,9,68	0/0:16,0:13:23.55:0,24,157	0/0:24,0:23:54.16:0,54,1018	0/0:24,0:23:11.44:0,11,953	0/0:32,0:20:48.12:0,48,928	1/1:19,0:10:21.07:296,21,0	0/0:19,0:17:45.04:0,45,745	0/0:30,0:27:60.20:0,60,1165	0/0:23,0:15:39.13:0,39,754	0/0:22,0:17:32.65:0,33,246	0/0:28,0:24:38.88:0,39,269	0/0:22,0:11:17.28:0,17,94	0/0:30,0:28:63.21:0,63,1215	0/1:18,15:22:12.60:593,0,13	0/0:35,0:30:75.24:0,75,1440	1/1:7,13:18:11.83:135,12,0
chr10	79743847	.	G	GAAAAGGAGA	6166.55	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=2.738;DP=635;FS=3.257;HRun=0;HaplotypeScore=174.8923;InbreedingCoeff=0.9000;MQ=66.43;MQ0=46;MQRankSum=-9.174;QD=48.94;ReadPosRankSum=-1.137;VQSLOD=4.5444;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,6:19:8.04:1133,8,0	0/0:9,0:8:21.07:0,21,664	0/0:29,0:21:60:0,60,1204	0/0:23,0:18:1.44:0,1,453	0/0:29,0:28:72.22:0,72,2060	0/0:22,0:21:51.15:0,51,707	0/0:23,0:19:36.35:0,36,1330	0/0:34,0:32:87.17:0,87,1883	0/0:16,0:14:36.03:0,36,1021	0/0:30,0:28:78.26:0,78,2161	0/0:28,0:26:69.21:0,69,1961	1/1:5,2:7:4.26:150,4,0	1/1:2,4:8:8.86:423,9,0	1/1:6,7:16:21.51:968,22,0	0/0:26,0:26:72.19:0,72,1852	0/0:20,0:20:56.83:0,57,1707	0/0:27,0:22:65.20:0,65,1654	0/0:14,0:11:15.18:0,15,535	0/0:22,0:22:63.18:0,63,1494	0/0:29,0:28:75.22:0,75,2061	0/0:21,0:17:48.13:0,48,1377	1/1:6,12:20:36.59:1569,37,0	1/1:8,16:26:24.26:1538,24,0	1/1:7,7:15:13.13:385,13,0	0/0:25,0:24:69.14:0,69,2030	0/0:29,0:24:69.17:0,69,1400	0/0:34,0:32:93.22:0,93,2634	0/0:19,0:18:21.07:0,21,367
chr10	79744235	.	CT	C	1091.58	PASS	AB=0.906;AC=12;AF=0.214;AN=56;BaseQRankSum=5.085;DP=390;FS=1.580;HRun=11;HaplotypeScore=77.6836;InbreedingCoeff=0.7335;MQ=70.40;MQ0=0;MQRankSum=5.092;QD=10.20;ReadPosRankSum=0.296;VQSLOD=3.0495;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:22.38:0,22,104	0/0:6,0:6:18.04:0,18,189	0/1:11,1:10:1.61:2,0,106	0/0:6,0:6:5.88:0,6,43	0/0:32,1:33:59.50:0,60,811	1/1:2,12:14:29.96:246,30,0	0/0:8,0:8:2.31:0,2,202	0/0:11,0:12:14.19:0,14,180	0/0:9,0:9:21:0,21,204	0/0:25,0:26:62.92:0,63,628	0/0:16,0:16:45.11:0,45,479	0/0:6,0:6:13.57:0,14,59	0/0:11,0:11:25.18:0,25,118	0/0:11,0:11:19.59:0,20,91	0/1:7,1:8:6.60:7,0,142	0/0:9,0:10:29.91:0,30,299	0/0:15,0:15:36.09:0,36,384	1/1:2,15:19:46.02:357,46,0	0/0:15,0:15:11.22:0,11,295	0/0:22,1:23:32.36:0,32,528	0/0:5,0:5:12.03:0,12,128	0/0:6,0:6:16.79:0,17,79	0/0:16,0:17:39.17:0,39,183	0/0:3,0:3:2.47:0,2,12	1/1:2,0:27:46.85:135,47,0	1/1:3,14:17:38.91:316,39,0	0/0:29,0:31:86.80:0,87,857	1/1:2,8:10:26:202,26,0
chr10	79744237	.	T	TTTTGTTG	6653.98	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.094;DP=403;FS=0.000;HRun=0;HaplotypeScore=116.2160;InbreedingCoeff=0.9739;MQ=70.59;MQ0=0;MQRankSum=-11.704;QD=82.15;ReadPosRankSum=0.852;VQSLOD=5.4490;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,9:15:29.82:1012,30,0	0/0:6,0:6:18.06:0,18,462	0/0:13,0:11:28.96:0,29,466	0/0:6,0:6:11.44:0,11,92	0/0:33,0:33:96.26:0,96,2184	0/0:13,0:13:33.07:0,33,605	0/0:8,0:8:24.08:0,24,568	0/0:10,0:10:27.05:0,27,543	0/0:8,0:8:24.08:0,24,530	0/0:26,0:26:72.24:0,72,1683	0/0:16,0:16:45.15:0,45,1156	1/1:4,4:8:21.07:728,21,0	1/1:4,9:13:30.02:1083,30,0	1/1:3,9:13:24.04:865,24,0	0/0:8,0:8:24.07:0,24,522	0/0:10,0:10:30.10:0,30,735	0/0:15,0:15:36.12:0,36,925	0/0:20,0:20:51.15:0,51,955	0/0:14,0:14:39.13:0,39,877	0/0:23,0:23:63.21:0,63,1480	0/0:5,0:5:15.04:0,15,333	1/1:1,6:7:21.07:783,21,0	1/1:5,14:21:51.08:1860,51,0	1/1:2,2:4:8.53:324,9,0	0/0:27,0:27:75.24:0,75,1374	0/0:17,0:17:48.15:0,48,856	0/0:31,0:31:93.30:0,93,2139	0/0:13,0:13:36.06:0,36,596
chr10	79744671	.	TAAAG	T	4217.08	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.944;DP=459;FS=12.708;HRun=0;HaplotypeScore=81.1140;InbreedingCoeff=0.9799;MQ=66.90;MQ0=0;MQRankSum=-4.155;QD=44.39;ReadPosRankSum=3.940;VQSLOD=4.6942;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,12:13:36.12:661,36,0	0/0:15,0:15:45.13:0,45,1127	0/0:12,0:12:27.01:0,27,629	0/0:4,0:4:12.04:0,12,315	0/0:19,0:19:50.91:0,51,1257	0/0:25,0:25:75.26:0,75,1924	0/0:11,0:11:33.09:0,33,761	0/0:36,0:36:93.31:0,93,2372	0/0:16,0:16:45.15:0,45,1161	0/0:22,0:21:51.18:0,51,1335	0/0:18,0:18:45.15:0,45,1175	1/1:0,12:12:36.12:650,36,0	1/1:5,16:21:42.14:768,42,0	1/1:1,12:13:33.11:606,33,0	0/0:11,0:11:33.11:0,33,815	0/0:16,0:16:48.15:0,48,1153	0/0:20,0:20:57.20:0,57,1461	0/0:14,0:14:42.14:0,42,1079	0/0:20,0:20:51.15:0,51,1223	0/0:26,0:26:69.22:0,69,1662	0/0:4,0:4:9.03:0,9,235	1/1:1,5:6:15.05:271,15,0	1/1:0,20:20:48.16:875,48,0	1/1:1,9:10:21.07:386,21,0	0/0:19,0:19:54.14:0,54,1311	0/0:18,0:18:42.14:0,42,1109	0/0:22,0:22:63.22:0,63,1662	0/0:16,0:16:48.16:0,48,1239
chr10	79744861	.	A	AT	4816.05	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.655;DP=442;FS=0.402;HRun=2;HaplotypeScore=63.6519;InbreedingCoeff=0.9944;MQ=71.78;MQ0=0;MQRankSum=-1.936;QD=37.92;ReadPosRankSum=2.824;VQSLOD=5.4786;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:51.17:732,51,0	0/0:6,0:6:18.05:0,18,213	0/0:11,0:10:22.36:0,22,256	0/0:8,0:8:17.29:0,17,160	0/0:12,0:12:33.10:0,33,409	0/0:19,0:19:48.13:0,48,571	0/0:15,0:15:36.11:0,36,445	0/0:20,0:20:57.15:0,57,666	0/0:12,0:12:30.09:0,30,372	0/0:14,0:14:42.12:0,42,503	0/0:19,0:19:51.16:0,51,632	1/1:0,13:13:39.13:561,39,0	1/1:0,19:19:54.18:777,54,0	1/1:1,20:21:57.19:810,57,0	0/0:12,0:12:36.08:0,36,420	0/0:15,0:15:42.12:0,42,510	0/0:20,0:19:54.16:0,54,656	0/0:12,0:12:36.09:0,36,431	0/0:14,0:14:42.12:0,42,509	0/0:16,0:16:42.11:0,42,506	0/0:14,0:14:36.10:0,36,435	1/1:0,9:9:21.07:296,21,0	1/1:2,22:24:56.92:787,57,0	1/1:1,20:21:60.20:853,60,0	0/0:10,0:10:30.09:0,30,372	0/0:18,0:18:48.13:0,48,571	0/0:39,0:39:99:0,114,1389	0/0:8,0:8:21.06:0,21,248
chr10	79745964	.	GA	G	2259.62	PASS	AC=38;AF=1.000;AN=38;DP=123;FS=0.000;HRun=5;HaplotypeScore=23.6485;InbreedingCoeff=-0.0703;MQ=29.54;MQ0=38;QD=24.56;VQSLOD=1.5710;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:0,3:3:9.03:102,9,0	1/1:0,3:3:6.02:68,6,0	1/1:1,6:6:15.04:169,15,0	1/1:2,11:13:30.08:336,30,0	1/1:1,4:4:12.03:136,12,0	1/1:0,3:3:9.03:102,9,0	1/1:0,7:7:21.06:237,21,0	./.	./.	1/1:1,1:1:3.01:34,3,0	1/1:0,2:1:3.01:34,3,0	1/1:0,5:5:15.04:170,15,0	1/1:0,3:3:9.03:102,9,0	1/1:2,2:3:6.02:68,6,0	1/1:1,3:3:9.02:100,9,0	1/1:1,7:7:18.05:203,18,0	1/1:0,2:2:6.02:68,6,0	./.	./.	./.	1/1:2,4:5:9.02:102,9,0	1/1:2,7:8:18.05:203,18,0	1/1:0,3:2:6.02:68,6,0	1/1:2,1:1:3.01:34,3,0
chr10	79753377	.	TC	T	1057.20	PASS	AB=0.794;AC=19;AF=0.352;AN=54;BaseQRankSum=3.249;DP=560;FS=5.536;HRun=1;HaplotypeScore=54.5834;InbreedingCoeff=0.2452;MQ=55.48;MQ0=42;MQRankSum=-2.812;QD=4.48;ReadPosRankSum=4.756;VQSLOD=0.8527;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:8,0:6:18.06:0,18,278	0/0:34,0:17:47.07:0,47,544	0/0:49,0:23:55.79:0,56,732	0/1:10,3:9:99:105,0,158	0/0:17,0:15:18.06:0,18,287	0/0:32,0:22:36.12:0,36,561	0/1:24,7:26:99:143,0,749	0/0:20,0:19:45.15:0,45,718	0/0:26,0:20:51.17:0,51,815	0/0:13,0:10:9.03:0,9,134	1/1:2,2:2:3.01:42,3,0	1/1:5,5:2:6.02:84,6,0	1/1:3,3:2:3.01:42,3,0	0/0:20,0:15:33.11:0,33,523	0/0:10,0:9:24.08:0,24,383	0/1:40,10:37:99:185,0,696	0/0:26,0:23:38.95:0,39,510	0/0:30,3:23:54.18:0,54,851	0/1:3,4:6:32.75:152,0,33	0/1:43,19:42:41.61:42,0,1115	1/1:4,1:1:3.01:42,3,0	1/1:1,3:1:3.01:42,3,0	1/1:3,9:9:15.05:209,15,0	0/0:15,0:13:24.08:0,24,383	0/1:14,4:15:80.59:81,0,530	0/0:18,1:15:3.28:0,3,627	0/1:12,2:13:56.84:57,0,297
chr10	79753742	.	C	CA	217.06	PASS	AB=1.000;AC=11;AF=0.917;AN=12;BaseQRankSum=-0.751;DP=17;FS=0.000;HRun=1;HaplotypeScore=35.2554;MQ=124.81;MQ0=1;MQRankSum=-0.751;QD=15.50;ReadPosRankSum=0.751;VQSLOD=3.2188;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,3:2:6.02:90,6,0	./.	0/1:5,0:4:2.36:23,0,2	1/1:0,2:1:2.97:20,3,0	1/1:0,1:1:3.01:45,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,2:2:5.98:65,6,0	1/1:0,1:1:3.01:45,3,0	./.	./.
chr10	79754582	.	GAC	G	230.34	PASS	AB=0.906;AC=16;AF=0.308;AN=52;BaseQRankSum=3.760;DP=446;FS=0.724;HRun=0;HaplotypeScore=101.1880;InbreedingCoeff=-0.0075;MQ=50.52;MQ0=14;MQRankSum=-1.044;QD=1.27;ReadPosRankSum=1.843;VQSLOD=1.7871;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:17:0.59:0,1,2	1/1:2,0:2:2.88:15,3,0	0/0:31,1:19:11.92:0,12,124	0/0:37,0:30:17.98:0,18,215	0/1:14,1:14:24.27:24,0,214	0/1:6,0:5:3.29:9,0,3	0/0:29,0:29:15.49:0,15,631	0/0:23,2:22:16.86:0,17,218	0/1:18,2:20:30.69:31,0,444	0/1:18,4:23:48.49:48,0,411	0/0:9,0:9:9.03:0,9,141	1/1:13,0:11:0.89:2,1,0	0/0:7,0:7:2.30:0,2,5	./.	0/1:18,4:23:99:112,0,353	0/1:14,2:17:51.38:51,0,297	0/0:23,1:24:13.18:0,13,633	0/1:7,0:8:12.20:12,0,25	0/0:11,0:10:15.87:0,16,181	0/0:8,0:8:12.51:0,13,184	0/0:34,1:35:22.95:0,23,943	0/1:15,0:15:18.06:18,0,19	./.	0/0:9,0:8:0.47:0,0,1	1/1:6,0:7:6.21:23,6,0	0/1:17,0:18:16.33:16,0,70	0/1:12,1:11:10.91:11,0,273	0/0:8,0:8:14.33:0,14,74
chr10	79754611	.	ACG	A	1455.69	PASS	AB=0.960;AC=26;AF=0.464;AN=56;BaseQRankSum=9.606;DP=544;FS=13.590;HRun=0;HaplotypeScore=122.8342;InbreedingCoeff=0.4266;MQ=45.13;MQ0=23;MQRankSum=-2.571;QD=5.24;ReadPosRankSum=-0.029;VQSLOD=2.0668;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,1:23:17.87:133,18,0	0/0:2,0:2:3.01:0,3,53	0/1:33,0:6:0.26:0,0,42	0/0:42,0:11:14.35:0,14,101	0/0:10,0:9:1.03:0,1,279	1/1:3,0:2:5.06:21,5,0	0/1:28,0:28:9.31:9,0,621	0/0:26,0:24:32.61:0,33,665	0/0:26,0:25:21.90:0,22,650	0/1:29,0:29:17.32:17,0,800	0/0:7,0:7:17.67:0,18,230	1/1:16,0:13:5.71:34,6,0	1/1:18,0:18:20.23:124,20,0	1/1:6,0:6:2.98:22,3,0	0/0:26,0:26:9.85:0,10,481	0/0:16,0:16:10.88:0,11,504	0/0:28,0:28:66.97:0,67,918	1/1:8,4:12:22.54:279,23,0	0/1:15,0:11:24.17:24,0,99	0/0:8,0:8:4.63:0,5,253	0/0:63,0:61:53.27:0,53,1727	1/1:20,0:20:14.91:120,15,0	1/1:10,0:9:3:25,3,0	1/1:18,1:17:8.55:62,9,0	0/1:7,0:7:25.93:26,0,176	0/1:14,7:21:85.29:434,0,85	0/0:12,0:10:21.84:0,22,279	1/1:3,10:11:24.06:312,24,0
chr10	79754613	.	GCA	G	376.29	PASS	AB=0.940;AC=23;AF=0.411;AN=56;BaseQRankSum=7.558;DP=547;FS=5.169;HRun=0;HaplotypeScore=128.2286;InbreedingCoeff=0.2347;MQ=46.51;MQ0=23;MQRankSum=-1.515;QD=1.29;ReadPosRankSum=2.262;VQSLOD=2.2833;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:22:0.99:0,1,3	0/0:2,0:2:3.01:0,3,48	0/0:32,0:5:11.34:0,11,91	0/0:43,0:10:6.47:0,6,59	0/0:10,0:9:21.07:0,21,320	1/1:7,0:6:2.80:13,3,0	0/1:24,2:27:38.87:39,0,464	0/0:23,0:21:40.35:0,40,590	0/0:27,0:26:46.59:0,47,627	0/1:27,2:29:28.61:29,0,734	0/0:6,1:7:8.61:0,9,216	1/1:17,0:13:4.28:16,4,0	1/1:18,0:18:3.06:9,3,0	1/1:6,0:6:1.25:3,1,0	0/0:24,1:25:3.06:0,3,473	0/0:14,1:15:3.04:0,3,476	0/0:25,0:25:57.14:0,57,804	1/1:13,0:13:2.58:101,3,0	0/1:13,2:10:59.88:60,0,78	0/1:7,1:8:17.91:18,0,213	0/1:63,2:63:10.77:11,0,1485	1/1:20,0:20:2.91:25,3,0	0/1:10,0:9:0.01:0,0,0	1/1:19,0:17:3.44:14,3,0	0/0:9,0:9:17.93:0,18,245	0/1:22,0:23:74.79:75,0,153	0/0:11,1:10:17.84:0,18,228	1/1:11,0:11:18.97:122,19,0
chr10	79754664	.	CCA	C	597.15	PASS	AB=0.901;AC=25;AF=0.481;AN=52;BaseQRankSum=3.430;DP=645;FS=0.746;HRun=0;HaplotypeScore=140.4817;InbreedingCoeff=0.0530;MQ=50.39;MQ0=32;MQRankSum=-0.495;QD=1.59;ReadPosRankSum=0.268;VQSLOD=2.6201;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:21:3.77:0,4,11	0/0:6,0:6:6.02:0,6,82	0/0:68,0:15:3.01:0,3,40	./.	0/1:8,3:11:36.26:57,0,36	0/1:10,1:13:2.34:44,0,2	0/1:40,2:44:38.47:38,0,454	0/0:25,0:22:20.87:0,21,229	0/0:16,0:15:8.92:0,9,106	0/0:26,0:24:20.74:0,21,263	0/1:9,3:12:21.12:21,0,121	1/1:15,0:12:2.82:14,3,0	1/1:17,0:18:5.47:26,5,0	0/1:13,0:11:0:0,0,0	0/1:17,2:20:58.82:59,0,222	0/0:14,0:14:6.02:0,6,90	0/1:21,3:25:62.92:63,0,363	0/1:9,1:10:13.37:55,0,13	0/1:16,1:15:21.13:21,0,118	./.	0/1:76,3:76:75.07:75,0,694	1/1:21,0:21:0.19:1,0,0	0/1:12,0:12:0:0,0,0	1/1:15,0:15:2.63:12,3,0	1/1:9,1:14:11.53:75,12,0	1/1:16,3:19:14.14:150,14,0	0/0:7,0:6:6.02:0,6,90	1/1:7,1:9:3.01:33,3,0
chr10	79754757	.	AAC	A	1678.69	PASS	AB=0.603;AC=17;AF=0.304;AN=56;BaseQRankSum=8.247;DP=627;FS=18.091;HRun=0;HaplotypeScore=149.5315;InbreedingCoeff=0.7424;MQ=57.63;MQ0=7;MQRankSum=-3.512;QD=11.04;ReadPosRankSum=-1.546;VQSLOD=2.0650;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,9:14:8.94:112,9,0	0/0:7,0:7:21.07:0,21,351	0/0:35,0:18:27.09:0,27,392	0/0:32,0:16:0.73:0,1,196	0/0:21,0:21:57.04:0,57,900	0/0:21,0:22:48.14:0,48,756	0/0:30,1:31:65.39:0,65,1133	0/0:29,0:29:66.23:0,66,1102	0/0:19,0:19:51.15:0,51,815	0/0:28,0:28:69.22:0,69,1106	0/0:15,0:15:30.05:0,30,484	1/1:5,7:11:8.17:110,8,0	0/1:6,8:15:39.96:166,0,40	1/1:7,8:15:18.01:211,18,0	0/0:17,0:17:42.14:0,42,696	0/0:22,0:22:51.17:0,51,847	0/0:25,0:25:63.22:0,63,1054	1/1:4,5:9:24.05:286,24,0	0/0:14,0:14:36.12:0,36,598	0/0:19,0:19:16.20:0,16,811	0/0:113,0:113:99:0,280,4596	1/1:13,15:28:23.03:247,23,0	1/1:11,6:17:9.95:129,10,0	0/1:7,11:16:0:0,0,0	0/0:13,0:13:39.13:0,39,651	0/1:4,14:18:5.09:489,0,5	0/0:13,0:13:30.10:0,30,490	1/1:2,3:5:9.03:115,9,0
chr10	79754777	.	C	CTA	804.76	PASS	AB=0.790;AC=11;AF=0.196;AN=56;BaseQRankSum=7.915;DP=590;FS=82.755;HRun=0;HaplotypeScore=137.3747;InbreedingCoeff=0.7331;MQ=55.87;MQ0=8;MQRankSum=-4.544;QD=10.45;ReadPosRankSum=-0.849;VQSLOD=0.3060;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,3:10:9.03:134,9,0	0/0:6,0:7:21.02:0,21,266	0/0:33,0:10:23.77:0,24,280	0/0:31,0:16:17.50:0,17,257	0/0:23,0:23:57.49:0,57,666	0/0:18,0:18:45.02:0,45,579	0/0:34,0:34:82.76:0,83,1110	0/0:27,0:27:81.18:0,81,1069	0/0:21,0:20:54.11:0,54,732	0/0:24,0:24:68.89:0,69,793	0/0:12,0:12:20.93:0,21,213	0/1:9,3:12:4.33:116,0,4	0/1:3,8:12:11.04:258,0,11	1/1:5,4:9:18.03:216,18,0	0/0:17,0:17:51.15:0,51,764	0/0:19,0:19:57.14:0,57,811	0/0:22,0:23:66.17:0,66,966	0/0:13,0:13:39.02:0,39,462	0/0:18,0:18:21.79:0,22,402	0/0:18,0:18:54.03:0,54,661	0/0:110,0:115:99:0,308,4400	1/1:12,5:17:12.83:155,13,0	1/1:4,2:6:7.56:83,8,0	0/1:11,0:11:0.02:0,0,0	0/0:15,0:15:35.99:0,36,446	0/0:22,0:20:53.92:0,54,587	0/0:15,0:14:36.02:0,36,429	0/0:7,0:7:21:0,21,231
chr10	79754791	.	AC	A	416.47	PASS	AB=0.903;AC=19;AF=0.339;AN=56;BaseQRankSum=8.831;DP=567;FS=13.211;HRun=7;HaplotypeScore=120.3045;InbreedingCoeff=0.6421;MQ=58.10;MQ0=8;MQRankSum=-6.530;QD=3.44;ReadPosRankSum=1.372;VQSLOD=0.0421;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,2:9:2.16:11,2,0	0/0:5,0:5:9.03:0,9,112	0/0:33,0:11:17.12:0,17,230	0/0:38,0:18:41.82:0,42,430	0/0:19,0:19:17.59:0,18,205	0/0:14,0:14:21.02:0,21,242	0/0:36,0:36:81.11:0,81,928	0/0:23,0:23:57.18:0,57,703	0/0:24,0:23:55.17:0,55,622	0/0:22,0:21:27.07:0,27,320	0/0:8,0:8:12.04:0,12,148	1/1:6,5:11:8.19:58,8,0	1/1:10,2:13:12.66:124,13,0	1/1:4,3:7:1.98:29,2,0	0/0:22,0:22:57.14:0,57,651	0/0:20,0:20:49.95:0,50,577	0/0:25,0:24:58.71:0,59,698	1/1:10,0:12:19.25:121,19,0	0/1:22,1:21:21.21:21,0,179	0/0:14,0:14:27.04:0,27,318	0/0:113,0:114:99:0,271,3266	1/1:11,4:15:6.91:49,7,0	0/1:4,2:6:1.53:12,0,2	1/1:2,3:5:2.96:30,3,0	0/0:17,0:17:30.06:0,30,345	0/1:13,0:13:17:108,0,17	0/0:11,0:10:24.05:0,24,280	1/1:5,0:5:7.56:34,8,0
chr10	79754798	.	CA	C	989.47	PASS	AB=0.825;AC=20;AF=0.357;AN=56;BaseQRankSum=7.018;DP=541;FS=22.918;HRun=1;HaplotypeScore=111.0357;InbreedingCoeff=0.7572;MQ=59.35;MQ0=6;MQRankSum=-5.639;QD=8.83;ReadPosRankSum=-0.263;VQSLOD=-0.2329;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:5.61:19,6,0	0/0:6,0:6:14.98:0,15,173	0/0:33,0:15:32.06:0,32,389	0/0:47,0:24:54.10:0,54,671	0/0:17,0:17:20.52:0,21,230	0/0:11,0:11:27:0,27,298	0/0:29,0:29:81.19:0,81,1105	0/0:25,0:25:72.17:0,72,918	0/0:23,0:23:66.07:0,66,822	0/0:22,0:21:47.84:0,48,482	0/0:8,0:8:15.04:0,15,200	1/1:9,0:9:8.29:44,8,0	1/1:13,0:13:17.97:93,18,0	1/1:9,0:9:12.23:45,12,0	0/0:21,0:21:54.09:0,54,713	0/0:18,0:18:48.12:0,48,636	0/0:24,0:23:66.16:0,66,885	1/1:6,5:11:27.07:336,27,0	0/1:16,2:16:36.78:117,0,37	0/0:12,0:12:30.04:0,30,371	0/0:108,0:108:99:0,274,3856	1/1:12,0:12:10.56:50,11,0	1/1:5,0:5:0.54:1,1,0	1/1:4,0:4:5.17:21,5,0	0/0:15,0:15:33.03:0,33,431	0/1:12,6:16:4.90:352,0,5	0/0:10,0:9:27.02:0,27,332	1/1:0,3:3:9.02:102,9,0
chr10	79754809	.	ACATGCACG	A	1435.32	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.755;DP=527;FS=26.966;HRun=0;HaplotypeScore=165.8348;InbreedingCoeff=0.8963;MQ=59.05;MQ0=4;MQRankSum=-7.771;QD=23.15;ReadPosRankSum=-1.067;VQSLOD=1.6437;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,4:11:11.25:202,11,0	0/0:7,0:7:18.06:0,18,660	0/0:32,0:15:27.34:0,27,1195	0/0:51,0:32:72.12:0,72,2116	0/0:16,0:16:19.35:0,19,733	0/0:9,0:9:24.08:0,24,1021	0/0:33,0:33:83.37:0,83,3000	0/0:29,0:29:81.28:0,81,2845	0/0:19,0:19:48.16:0,48,2033	0/0:21,0:20:51.17:0,51,2044	0/0:9,0:9:20.22:0,20,799	1/1:5,5:10:17.08:366,17,0	1/1:9,3:12:21.05:460,21,0	1/1:4,5:9:11.99:242,12,0	0/0:17,0:17:45.14:0,45,1847	0/0:15,0:15:42.13:0,42,1655	0/0:23,0:22:60.20:0,60,2480	0/0:13,0:13:33.58:0,34,1250	0/0:18,0:16:39.13:0,39,1261	0/0:10,0:10:21.03:0,21,787	0/0:98,0:98:99:0,251,9698	1/1:4,5:9:6.02:156,6,0	1/1:4,2:6:3.01:39,3,0	1/1:1,3:4:5.57:149,6,0	0/0:14,0:14:30.09:0,30,1196	0/0:16,0:16:39.13:0,39,1536	0/0:8,0:7:15.05:0,15,670	0/0:5,0:5:12.04:0,12,506
chr10	79754810	.	CATGCA	C	655.15	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.816;DP=511;FS=32.972;HRun=0;HaplotypeScore=135.3753;InbreedingCoeff=0.8923;MQ=58.84;MQ0=4;MQRankSum=-7.391;QD=13.94;ReadPosRankSum=0.113;VQSLOD=1.0550;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,1:10:12.02:150,12,0	0/0:7,0:7:18.06:0,18,511	0/0:32,0:16:38.15:0,38,1047	0/0:50,0:32:81.30:0,81,1952	0/0:16,0:16:19.46:0,19,639	0/0:9,0:9:24.08:0,24,778	0/0:33,0:33:89.84:0,90,2559	0/0:27,0:27:81.28:0,81,2379	0/0:19,0:19:48.16:0,48,1552	0/0:20,0:19:51.17:0,51,1615	0/0:9,0:9:21.07:0,21,622	1/1:7,1:10:20.03:194,20,0	1/1:5,2:7:20.97:259,21,0	1/1:5,2:7:10.74:111,11,0	0/0:17,0:17:45.15:0,45,1412	0/0:15,0:15:45.14:0,45,1332	0/0:23,0:22:66.18:0,66,1941	0/0:13,0:13:33.11:0,33,956	0/0:18,0:16:39.13:0,39,1109	0/0:10,0:10:21.07:0,21,631	0/0:98,0:98:99:0,271,7878	1/1:6,0:8:6.01:62,6,0	0/0:4,0:5:2.80:0,3,13	1/1:4,0:4:5.95:51,6,0	0/0:15,0:15:33.11:0,33,997	0/0:14,0:14:42.13:0,42,1236	0/0:6,0:6:18.04:0,18,522	0/0:5,0:5:12.04:0,12,397
chr10	79754815	.	ACG	A	470.55	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.459;DP=497;FS=17.420;HRun=0;HaplotypeScore=110.7001;InbreedingCoeff=0.8867;MQ=60.15;MQ0=3;MQRankSum=-6.701;QD=10.23;ReadPosRankSum=0.269;VQSLOD=1.8752;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,4:9:10.17:101,10,0	0/0:6,0:6:18.06:0,18,346	0/0:36,0:20:50.18:0,50,892	0/0:58,0:35:74.84:0,75,1355	0/0:16,0:16:26.75:0,27,440	0/0:9,0:9:24.08:0,24,453	0/0:29,0:29:83.84:0,84,1409	0/0:25,0:25:75.17:0,75,1308	0/0:18,0:18:45.15:0,45,858	0/0:18,0:18:53.67:0,54,912	0/0:8,0:8:21.01:0,21,377	1/1:8,2:10:15.44:174,15,0	1/1:7,0:7:18.28:153,18,0	1/1:7,0:7:9.02:100,9,0	0/0:16,0:16:42.14:0,42,808	0/0:13,0:13:39.13:0,39,747	0/0:22,0:21:63.22:0,63,1178	0/0:14,0:14:31.19:0,31,604	0/0:16,0:14:36.03:0,36,553	0/0:10,0:10:21.07:0,21,384	0/0:92,2:94:99:0,228,4317	1/1:7,1:8:6:56,6,0	0/0:4,1:5:1.25:0,1,3	1/1:4,0:4:5.99:55,6,0	0/0:13,0:13:30.10:0,30,576	0/0:13,0:13:39.12:0,39,712	0/0:7,0:7:18.06:0,18,347	0/0:4,0:4:12.04:0,12,231
chr10	79754909	.	A	ATAT	178.53	PASS	AB=0.875;AC=8;AF=0.148;AN=54;BaseQRankSum=5.624;DP=709;FS=11.298;HRun=0;HaplotypeScore=131.2545;InbreedingCoeff=0.4258;MQ=53.81;MQ0=50;MQRankSum=-4.666;QD=3.57;ReadPosRankSum=-1.076;VQSLOD=1.9081;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,3:6:3.30:178,3,0	0/0:5,0:5:12.04:0,12,223	0/0:103,0:20:53.21:0,53,797	0/0:113,0:29:63.50:0,64,916	0/0:18,0:18:47.98:0,48,717	0/0:23,0:23:69.09:0,69,1140	0/0:24,0:24:69.24:0,69,1285	0/0:37,0:35:93.26:0,93,1614	0/0:13,0:13:36.12:0,36,655	0/0:25,0:25:62.88:0,63,1090	0/0:13,0:13:39:0,39,618	1/1:3,0:1:2.04:6,2,0	./.	0/0:3,0:3:2.74:0,3,12	0/0:23,0:24:29.45:0,29,1186	0/0:17,0:17:48.16:0,48,876	0/0:25,0:24:66.18:0,66,1193	0/1:20,0:20:8.26:8,0,932	0/0:34,0:30:39.47:0,39,1254	0/0:10,0:10:23.95:0,24,339	0/0:101,1:102:99:0,261,4825	0/1:2,1:3:1.22:68,0,1	0/1:3,0:3:0:0,0,0	0/1:8,2:12:30.63:31,0,38	0/0:19,0:19:54.06:0,54,888	0/0:26,0:25:75.26:0,75,1396	0/0:9,0:10:11.54:0,12,472	0/0:14,0:14:42.14:0,42,781
chr10	79754919	.	ACATG	A	71.73	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=6.769;DP=700;FS=9.155;HRun=0;HaplotypeScore=133.7929;InbreedingCoeff=0.7321;MQ=53.13;MQ0=46;MQRankSum=-5.746;QD=2.24;ReadPosRankSum=-0.822;VQSLOD=1.9499;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,1:6:9.23:77,9,0	0/0:5,0:5:15.05:0,15,403	0/0:98,0:26:58.67:0,59,1380	0/0:116,0:33:83.61:0,84,1622	0/0:16,0:16:42.14:0,42,1186	0/0:24,0:24:66.23:0,66,1774	0/0:22,0:22:66.21:0,66,1769	0/0:31,0:31:67.97:0,68,2066	0/0:18,0:18:54.17:0,54,1351	0/0:32,0:32:86.72:0,87,2118	0/0:12,0:12:33.11:0,33,939	1/1:1,0:1:3.01:34,3,0	./.	1/1:3,0:3:5.37:35,5,0	0/0:26,0:26:64.50:0,64,1943	0/0:17,0:17:47.90:0,48,1321	0/0:22,0:21:59.74:0,60,1683	0/0:18,1:19:6:0,6,1063	0/0:32,0:27:76.81:0,77,2036	0/0:10,0:10:27.09:0,27,664	0/0:97,0:96:99:0,267,7083	1/1:3,0:3:2.94:30,3,0	1/1:2,2:3:1.55:4,2,0	0/1:13,0:13:1.46:27,0,1	0/0:17,0:17:42.14:0,42,1214	0/0:26,0:26:78.26:0,78,2023	0/0:9,0:9:15.83:0,16,639	0/0:18,0:18:50.84:0,51,1286
chr10	79754920	.	CATGT	C	195.04	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=7.189;DP=695;FS=7.735;HRun=0;HaplotypeScore=132.1605;InbreedingCoeff=0.7331;MQ=53.24;MQ0=46;MQRankSum=-5.652;QD=4.76;ReadPosRankSum=-0.708;VQSLOD=1.2330;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,1:6:14.82:126,15,0	0/0:5,0:5:15.05:0,15,412	0/0:96,0:26:52.64:0,53,1323	0/0:118,0:35:85.99:0,86,1660	0/0:17,0:17:45.15:0,45,1246	0/0:24,0:24:66.23:0,66,1785	0/0:22,0:22:63.22:0,63,1666	0/0:29,0:29:36.82:0,37,1840	0/0:18,0:18:54.19:0,54,1438	0/0:31,0:31:68.31:0,68,2185	0/0:12,0:12:33.11:0,33,920	1/1:0,1:1:3.01:40,3,0	./.	1/1:2,1:3:5.38:50,5,0	0/0:24,1:25:48.57:0,49,1854	0/0:17,0:17:47.77:0,48,1247	0/0:22,0:21:59.74:0,60,1634	0/0:19,0:19:11.50:0,11,1087	0/0:33,0:28:78.15:0,78,2009	0/0:10,0:10:27.09:0,27,722	0/0:94,0:93:99:0,253,6761	1/1:1,2:3:5.93:59,6,0	1/1:2,2:3:1.55:4,2,0	1/1:11,2:13:0.54:56,1,0	0/0:17,0:17:42.14:0,42,1173	0/0:26,0:26:75.26:0,75,1989	0/1:9,0:9:1.79:2,0,628	0/0:18,0:18:50.72:0,51,1230
chr10	79754923	.	G	GCATAC	274.38	PASS	AB=0.826;AC=5;AF=0.093;AN=54;BaseQRankSum=4.977;DP=681;FS=9.105;HRun=0;HaplotypeScore=152.3095;InbreedingCoeff=0.0925;MQ=54.54;MQ0=42;MQRankSum=-4.198;QD=8.31;ReadPosRankSum=-0.082;VQSLOD=2.3225;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:5,3:6:29.20:273,0,29	0/0:5,0:5:15.05:0,15,349	0/0:96,0:28:55.13:0,55,1173	0/0:118,0:35:81.14:0,81,1543	0/0:17,0:17:45.15:0,45,1040	0/0:23,0:23:66.23:0,66,1514	0/0:20,0:20:60.19:0,60,1333	0/0:24,0:24:66.17:0,66,1373	0/0:19,0:19:54.19:0,54,1231	0/0:31,0:31:87.29:0,87,1939	0/0:12,0:12:33.11:0,33,767	0/0:1,0:1:2.50:0,2,9	./.	0/0:2,0:2:3:0,3,27	0/0:26,0:26:67.19:0,67,1525	0/0:16,0:16:45.01:0,45,998	0/0:21,0:20:60.21:0,60,1381	0/1:17,0:17:9.48:9,0,915	0/0:30,0:27:81.23:0,81,1607	0/0:11,0:11:27.09:0,27,626	0/0:89,0:90:99:0,256,5612	0/1:2,0:3:16.55:87,0,17	1/1:5,0:4:0.47:1,0,0	0/0:7,4:12:2.98:0,3,34	0/0:18,0:18:45.14:0,45,1003	0/0:27,0:27:81.25:0,81,1786	0/0:10,0:10:27.06:0,27,577	0/0:18,0:18:47.19:0,47,1052
chr10	79756436	.	GCTTT	G	1332.06	PASS	AB=0.971;AC=25;AF=0.893;AN=28;BaseQRankSum=3.463;DP=382;FS=7.306;HRun=0;HaplotypeScore=69.5258;InbreedingCoeff=-0.1885;MQ=61.42;MQ0=4;MQRankSum=-1.163;QD=5.22;ReadPosRankSum=-0.835;VQSLOD=0.4818;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:12,0:12:15:187,15,0	./.	./.	1/1:14,0:22:9:77,9,0	0/1:20,0:20:28.93:95,0,29	0/1:10,0:10:30.21:30,0,47	./.	1/1:10,0:14:3:28,3,0	1/1:14,0:19:12.01:110,12,0	1/1:7,0:16:17.91:155,18,0	./.	./.	./.	1/1:11,9:20:6.02:90,6,0	1/1:8,0:9:3:28,3,0	0/1:19,2:20:72.43:72,0,182	./.	1/1:17,3:18:9.01:111,9,0	1/1:19,7:26:6.02:84,6,0	./.	./.	./.	./.	1/1:24,0:24:18.05:196,18,0	./.	1/1:10,10:21:12.03:164,12,0	./.
chr10	79756491	.	TTCTTTCTC	T	1204.88	PASS	AB=1.000;AC=19;AF=0.413;AN=46;BaseQRankSum=4.720;DP=282;FS=29.687;HRun=0;HaplotypeScore=77.7869;InbreedingCoeff=0.1152;MQ=57.40;MQ0=5;MQRankSum=-3.196;QD=7.67;ReadPosRankSum=2.566;VQSLOD=-0.0942;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:1:2.97:20,3,0	0/1:8,0:8:20:20,0,69	0/0:12,0:7:21.02:0,21,211	0/0:15,0:10:23.95:0,24,232	0/1:20,0:20:69.14:69,0,204	0/0:12,0:12:20.49:0,20,170	0/0:11,0:11:13.48:0,13,319	0/0:17,0:14:35.57:0,36,260	0/1:12,0:12:28.79:29,0,136	0/1:17,0:16:99:109,0,237	0/1:17,0:17:99:267,0,122	./.	./.	./.	0/0:17,0:17:29.65:0,30,223	0/1:8,0:8:34.74:35,0,101	0/0:17,0:17:39.24:0,39,598	1/1:5,0:5:8.95:69,9,0	0/1:14,0:12:32.84:33,0,139	0/0:18,0:18:18:0,18,255	0/0:5,0:5:9.38:0,9,64	./.	1/1:1,0:1:2.97:20,3,0	./.	1/1:3,17:20:18.06:451,18,0	0/1:11,0:11:4.09:142,0,4	0/1:20,0:20:19.67:20,0,236	1/1:3,0:3:9:81,9,0
chr10	79756495	.	TTCTC	T	817.41	PASS	AB=1.000;AC=20;AF=0.435;AN=46;BaseQRankSum=7.271;DP=284;FS=40.498;HRun=0;HaplotypeScore=58.5427;InbreedingCoeff=0.2395;MQ=57.25;MQ0=4;MQRankSum=-2.781;QD=5.08;ReadPosRankSum=3.116;VQSLOD=0.2519;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:1:2.97:20,3,0	0/1:10,0:10:53.93:54,0,70	0/0:13,0:8:24.03:0,24,246	0/0:16,0:10:23.95:0,24,232	0/0:20,0:20:11.83:0,12,217	1/1:1,11:12:15.01:235,15,0	0/0:11,0:11:14.31:0,14,191	0/0:18,0:16:41.54:0,42,308	0/0:12,0:12:15.98:0,16,152	0/0:19,0:18:26.60:0,27,310	0/1:17,0:17:18.41:18,0,127	./.	./.	./.	0/1:18,0:18:10.94:11,0,128	0/0:8,0:8:10.06:0,10,111	0/1:16,0:16:16.33:16,0,257	1/1:6,0:6:14.93:114,15,0	0/1:13,0:11:25.15:25,0,132	0/1:19,0:19:4.30:4,0,226	0/0:5,0:5:8.91:0,9,63	./.	1/1:1,0:1:2.97:20,3,0	./.	1/1:17,0:17:17.97:196,18,0	0/1:9,0:9:4.08:142,0,4	0/1:19,0:19:42.74:43,0,139	1/1:3,0:3:9:81,9,0
chr10	79757077	.	G	GAGCCATTAA	11783.70	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=5.730;DP=532;FS=11.810;HRun=0;HaplotypeScore=146.5202;InbreedingCoeff=0.9975;MQ=63.50;MQ0=0;MQRankSum=-14.203;QD=99.02;ReadPosRankSum=-0.831;VQSLOD=4.8415;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,12:27:63.21:2305,63,0	0/0:10,0:10:30.10:0,30,885	0/0:24,0:20:51.17:0,51,1361	0/0:36,0:36:96.22:0,96,2613	0/0:21,0:21:48.16:0,48,1425	0/0:28,0:28:78.27:0,78,2356	0/0:13,0:13:39.13:0,39,1141	0/0:29,0:29:84.29:0,84,2416	0/0:21,0:21:63.22:0,63,1912	0/0:27,0:27:78.27:0,78,2240	0/0:15,0:15:45.15:0,45,1241	1/1:4,10:17:42.14:1894,42,0	1/1:8,12:22:54.14:2348,54,0	1/1:5,9:15:39.13:1635,39,0	0/0:18,0:18:54.16:0,54,1441	0/0:16,0:16:45.14:0,45,1261	0/0:17,0:17:45.15:0,45,1367	0/0:15,0:15:42.14:0,42,1266	0/0:22,0:22:63.18:0,63,1575	0/0:19,0:19:57.20:0,57,1704	0/0:14,0:14:36.10:0,36,946	1/1:6,7:15:39.09:1486,39,0	1/1:3,4:7:18.06:836,18,0	1/1:3,11:16:30.06:1279,30,0	0/0:19,0:19:54.19:0,54,1595	0/0:24,0:24:69.24:0,69,2032	0/0:18,0:18:51.16:0,51,1515	0/0:7,0:7:21.07:0,21,608
chr10	79757907	.	AAG	A	4790.16	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.950;DP=538;FS=3.385;HRun=0;HaplotypeScore=92.9410;InbreedingCoeff=0.9966;MQ=83.03;MQ0=0;MQRankSum=-9.688;QD=37.42;ReadPosRankSum=1.806;VQSLOD=7.2088;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:48.16:683,48,0	0/0:9,0:9:27.05:0,27,435	0/0:19,0:19:38.71:0,39,796	0/0:16,0:15:34.96:0,35,575	0/0:26,0:26:78.25:0,78,1368	0/0:20,0:20:57.18:0,57,1014	0/0:10,0:10:30.10:0,30,548	0/0:24,0:24:72.23:0,72,1226	0/0:20,0:20:60.19:0,60,1078	0/0:28,0:28:84.27:0,84,1474	0/0:27,0:27:81.28:0,81,1490	1/1:0,21:21:54.14:753,54,0	1/1:1,20:21:53.83:778,54,0	1/1:0,18:18:51.13:716,51,0	0/0:15,0:15:45.15:0,45,832	0/0:12,0:12:36.12:0,36,643	0/0:21,0:21:60.19:0,60,1047	0/0:14,0:14:39.11:0,39,687	0/0:17,0:17:45.15:0,45,821	0/0:22,0:22:63.16:0,63,1069	0/0:30,0:30:84.27:0,84,1513	1/1:0,21:21:63.21:907,63,0	1/1:1,14:15:42.07:575,42,0	1/1:0,10:10:27.09:377,27,0	0/0:17,0:17:51.17:0,51,942	0/0:35,0:35:99:0,102,1858	0/0:23,0:23:66.23:0,66,1203	0/0:5,0:5:15.05:0,15,277
chr10	79758597	.	AT	A	4276.43	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.294;DP=567;FS=2.223;HRun=3;HaplotypeScore=54.5316;InbreedingCoeff=0.9996;MQ=79.77;MQ0=0;MQRankSum=-2.844;QD=32.90;ReadPosRankSum=2.900;VQSLOD=5.1563;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:51.16:632,51,0	0/0:15,0:15:45.15:0,45,648	0/0:21,0:21:60.19:0,60,819	0/0:11,0:11:27.88:0,28,319	0/0:27,0:27:81.26:0,81,1148	0/0:27,0:27:81.27:0,81,1165	0/0:16,0:16:48.15:0,48,675	0/0:27,0:27:78.26:0,78,1120	0/0:16,0:16:45.15:0,45,648	0/0:28,0:27:81.27:0,81,1167	0/0:24,0:24:72.21:0,72,986	1/1:0,15:15:39.12:483,39,0	1/1:0,14:14:36.11:446,36,0	1/1:0,21:21:54.17:669,54,0	0/0:20,0:20:57.19:0,57,820	0/0:17,0:17:51.17:0,51,734	0/0:20,0:20:60.20:0,60,864	0/0:12,0:12:36.12:0,36,518	0/0:25,0:25:69.22:0,69,973	0/0:28,0:28:84.28:0,84,1209	0/0:17,0:17:51.17:0,51,734	1/1:0,23:23:63.20:781,63,0	1/1:0,27:27:75.24:930,75,0	1/1:1,10:11:27.08:335,27,0	0/0:23,0:23:69.21:0,69,954	0/0:20,0:19:57.19:0,57,821	0/0:31,0:31:93.30:0,93,1316	0/0:12,0:12:36.12:0,36,518
chr10	79759484	.	T	TA	989.85	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=4.290;DP=336;FS=31.485;HRun=7;HaplotypeScore=34.5029;InbreedingCoeff=0.8900;MQ=70.57;MQ0=0;MQRankSum=-5.865;QD=18.00;ReadPosRankSum=-1.894;VQSLOD=1.2552;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,6:8:18.01:198,18,0	0/0:9,0:9:27.04:0,27,261	0/0:6,0:6:5.83:0,6,82	0/0:4,0:4:6.01:0,6,57	0/0:19,0:19:48.07:0,48,463	0/0:19,0:19:48.06:0,48,457	0/0:5,0:5:12.02:0,12,116	0/0:29,0:29:78.10:0,78,746	0/0:9,0:9:27.04:0,27,261	0/0:18,0:18:51.07:0,51,489	0/0:15,0:15:45.07:0,45,435	1/1:1,7:8:18.06:217,18,0	1/1:4,10:14:30.08:353,30,0	1/1:1,6:8:15.05:181,15,0	0/0:17,0:17:48.08:0,48,463	0/0:11,0:11:24.03:0,24,232	0/0:17,0:17:42.07:0,42,406	0/0:5,0:5:9.01:0,9,87	0/0:10,0:10:21.01:0,21,196	0/0:15,0:15:42.05:0,42,400	0/0:6,0:6:18.03:0,18,174	./.	1/1:3,11:14:15.05:181,15,0	1/1:2,1:3:3.01:34,3,0	0/0:12,0:12:36.06:0,36,348	0/0:20,0:20:51.06:0,51,486	0/0:18,0:18:42.06:0,42,406	0/0:16,0:16:27.03:0,27,261
chr10	79759581	.	G	GCGACATA	2163.78	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=5.265;DP=402;FS=4.250;HRun=0;HaplotypeScore=84.8435;InbreedingCoeff=0.9083;MQ=81.18;MQ0=0;MQRankSum=-6.803;QD=51.52;ReadPosRankSum=0.615;VQSLOD=3.3815;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:6:18.06:0,18,473	0/0:11,0:11:30.10:0,30,769	0/0:11,0:11:30.10:0,30,641	0/0:30,0:30:90.22:0,90,2205	0/0:22,0:21:66.15:0,66,1422	0/0:10,0:10:30.10:0,30,774	0/0:16,0:16:42.14:0,42,942	0/0:12,0:12:30.07:0,30,720	0/0:21,0:21:63.20:0,63,1549	0/0:31,0:31:87.25:0,87,2243	1/1:0,3:5:9.03:373,9,0	1/1:6,3:9:21.03:590,21,0	1/1:0,8:8:12.04:498,12,0	0/0:18,0:18:54.19:0,54,1475	0/0:13,0:13:39.12:0,39,1002	0/0:7,0:7:21.07:0,21,587	0/0:3,0:3:9.02:0,9,193	0/0:17,0:17:51.13:0,51,1208	0/0:25,0:25:69.24:0,69,1799	0/0:18,0:18:54.19:0,54,1479	1/1:0,4:7:6.02:249,6,0	1/1:0,2:5:6.02:248,6,0	1/1:0,4:8:9.03:373,9,0	0/0:25,0:25:75.26:0,75,2069	0/0:26,0:26:78.25:0,78,2034	0/0:19,0:19:54.18:0,54,1440	0/0:18,0:18:48.16:0,48,1342
chr10	79759726	.	TC	T	1513.73	PASS	AB=0.900;AC=13;AF=0.232;AN=56;BaseQRankSum=11.373;DP=595;FS=7.207;HRun=1;HaplotypeScore=66.2218;InbreedingCoeff=0.8955;MQ=59.63;MQ0=2;MQRankSum=-2.519;QD=14.02;ReadPosRankSum=1.919;VQSLOD=2.7568;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,3:26:30.95:281,31,0	0/0:13,0:13:39.13:0,39,624	0/0:27,0:21:31.92:0,32,874	0/0:21,0:15:36.12:0,36,548	0/0:28,0:28:84.26:0,84,1294	0/0:13,0:13:39.13:0,39,624	0/0:13,0:13:39.13:0,39,618	0/0:44,0:44:99:0,132,2066	0/0:21,0:21:60.19:0,60,930	0/0:37,0:37:99:0,111,1726	0/0:28,0:28:84.26:0,84,1285	1/1:11,3:14:26.42:294,26,0	1/1:7,8:15:23.76:263,24,0	1/1:14,3:17:29.61:359,30,0	0/0:22,0:22:66.22:0,66,1033	0/0:14,0:14:42.14:0,42,665	0/0:33,0:33:95.10:0,95,1459	0/0:19,0:18:42.51:0,43,608	0/0:13,0:13:39.13:0,39,598	0/0:23,0:23:69.23:0,69,1088	0/0:18,0:18:54.17:0,54,830	1/1:9,1:10:18:204,18,0	1/1:16,1:17:18.03:209,18,0	0/1:8,1:9:34.23:93,0,34	0/0:27,0:27:81.28:0,81,1283	0/0:27,0:27:81.28:0,81,1283	0/0:24,0:24:72.25:0,72,1151	0/0:22,0:21:63.15:0,63,902
chr10	79759730	.	T	TC	1890.58	PASS	AB=0.901;AC=13;AF=0.232;AN=56;BaseQRankSum=11.745;DP=585;FS=11.204;HRun=0;HaplotypeScore=64.7612;InbreedingCoeff=0.7405;MQ=59.60;MQ0=2;MQRankSum=-1.099;QD=15.25;ReadPosRankSum=1.363;VQSLOD=5.0030;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,3:25:7.23:188,0,7	0/0:13,0:13:39.13:0,39,546	0/0:27,0:21:59.66:0,60,774	0/0:22,0:17:35.85:0,36,482	0/0:25,0:25:75.25:0,75,1046	0/0:14,0:14:42.11:0,42,552	0/0:13,0:13:39.13:0,39,545	0/0:44,0:44:99:0,132,1846	0/0:18,0:18:51.17:0,51,713	0/0:39,0:39:99:0,117,1586	0/0:27,0:27:81.27:0,81,1133	1/1:11,3:14:26.75:344,27,0	1/1:7,8:15:36.95:486,37,0	1/1:13,3:16:30.10:440,30,0	0/0:23,0:23:66.21:0,66,907	0/0:16,0:16:45.14:0,45,614	0/0:29,1:31:75.61:0,76,1208	0/1:15,2:16:27.23:27,0,383	0/0:13,0:13:39.13:0,39,545	0/0:22,0:22:66.22:0,66,923	0/0:19,0:19:57.17:0,57,779	1/1:9,1:10:15.05:214,15,0	1/1:15,1:16:15.05:212,15,0	0/1:10,1:11:4.46:162,0,4	0/0:27,0:27:81.25:0,81,1114	0/0:26,0:26:78.26:0,78,1091	0/0:23,0:23:69.21:0,69,947	0/0:18,0:17:51.13:0,51,663
chr10	79759737	.	T	TCTAC	2723.66	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.469;DP=601;FS=6.191;HRun=0;HaplotypeScore=97.7442;InbreedingCoeff=0.9923;MQ=58.70;MQ0=2;MQRankSum=-2.997;QD=23.28;ReadPosRankSum=-0.628;VQSLOD=2.9835;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:24,1:25:19.57:351,20,0	0/0:13,0:13:33.10:0,33,563	0/0:25,0:19:36.11:0,36,578	0/0:22,0:16:35.69:0,36,496	0/0:29,0:29:78.19:0,78,1251	0/0:15,0:15:42.13:0,42,706	0/0:14,0:14:36.06:0,36,546	0/0:46,0:45:99:0,114,1867	0/0:21,0:21:57.16:0,57,958	0/0:40,0:40:99:0,111,1829	0/0:27,0:27:75.21:0,75,1242	1/1:14,0:14:27.05:443,27,0	1/1:15,0:15:38.82:659,39,0	1/1:18,0:18:30.10:570,30,0	0/0:22,0:22:63.19:0,63,1057	0/0:15,0:15:45.13:0,45,744	0/0:31,0:31:87.09:0,87,1447	0/0:16,0:15:33.03:0,33,525	0/0:13,0:13:33.10:0,33,562	0/0:23,0:23:63.20:0,63,1102	0/0:20,0:20:51.14:0,51,856	1/1:10,0:10:15.05:269,15,0	1/1:21,0:21:15.05:272,15,0	1/1:11,3:14:23.90:357,24,0	0/0:27,0:27:78.22:0,78,1306	0/0:26,0:26:72.22:0,72,1206	0/0:24,0:24:69.20:0,69,1172	0/0:15,0:14:42.14:0,42,754
chr10	79759806	.	T	TTGTGTGTGTGTGTG	2120.96	PASS	AB=0.679;AC=18;AF=0.321;AN=56;BaseQRankSum=4.871;DP=682;FS=6.053;HRun=0;HaplotypeScore=221.5450;InbreedingCoeff=0.5831;MQ=57.44;MQ0=3;MQRankSum=-6.026;QD=8.99;ReadPosRankSum=-1.993;VQSLOD=1.8105;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:35:6.02:188,6,0	0/0:7,0:7:12.04:0,12,435	0/0:40,0:22:31.95:0,32,571	0/1:42,0:28:15.74:16,0,750	0/0:38,0:38:84.25:0,84,2409	0/0:14,0:14:32.75:0,33,1056	0/0:9,0:9:18.06:0,18,575	0/0:35,0:36:63.21:0,63,1744	0/0:36,0:36:90.23:0,90,2704	0/0:38,0:39:99:0,99,3281	0/0:18,0:18:39.12:0,39,1189	1/1:1,12:15:9.03:346,9,0	1/1:5,11:19:3.01:203,3,0	1/1:1,13:19:9.03:389,9,0	0/0:22,0:22:54.16:0,54,1549	0/0:23,0:23:57.16:0,57,1808	0/0:31,0:31:68.94:0,69,2339	0/1:5,0:18:16.63:17,0,313	0/0:21,0:19:18.05:0,18,392	0/0:28,0:29:78.18:0,78,2154	0/0:36,0:39:99:0,108,3498	1/1:7,0:8:12.03:255,12,0	1/1:3,13:19:6.02:266,6,0	1/1:23,0:23:24.05:601,24,0	0/0:18,0:17:48.14:0,48,1598	0/1:10,0:28:8.38:8,0,738	0/0:25,0:25:72.25:0,72,2204	0/1:1,0:10:17.11:17,0,296
chr10	79760120	.	T	TG	1721.73	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.701;DP=521;FS=1.233;HRun=0;HaplotypeScore=88.3681;InbreedingCoeff=0.9675;MQ=94.74;MQ0=0;MQRankSum=-9.822;QD=30.75;ReadPosRankSum=0.420;VQSLOD=3.4440;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:21.67:375,22,0	0/0:9,0:9:27.09:0,27,377	0/0:29,0:31:80.76:0,81,1144	0/0:19,0:19:57.18:0,57,770	0/0:34,0:34:99:0,99,1384	0/0:25,0:25:75.25:0,75,1047	0/0:13,0:13:39.13:0,39,546	0/0:31,0:31:87.28:0,87,1188	0/0:20,0:20:54.17:0,54,738	0/0:36,0:36:99:0,99,1370	0/0:18,0:18:54.18:0,54,755	1/1:5,1:6:15.04:200,15,0	1/1:4,0:4:9.03:143,9,0	1/1:5,0:5:12.04:173,12,0	0/0:23,0:23:69.23:0,69,965	0/0:25,0:25:75.25:0,75,1047	0/0:9,0:9:24.05:0,24,315	0/0:13,0:13:39.13:0,39,545	0/0:19,0:19:57.19:0,57,797	0/0:31,0:31:90.30:0,90,1258	0/0:17,0:17:51.17:0,51,713	1/1:7,0:7:21.07:328,21,0	1/1:16,0:16:33.11:512,33,0	1/1:6,3:9:8.92:180,9,0	0/0:13,0:13:39.13:0,39,545	0/0:33,0:33:93.30:0,93,1286	0/0:36,0:35:99:0,105,1469	0/0:10,0:10:30.10:0,30,419
chr10	79760306	.	TCTTGTC	T	6961.35	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.903;DP=685;FS=3.484;HRun=0;HaplotypeScore=151.0825;InbreedingCoeff=0.9780;MQ=86.90;MQ0=0;MQRankSum=-15.748;QD=49.72;ReadPosRankSum=-2.047;VQSLOD=4.2664;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:35.96:662,36,0	0/0:12,0:12:36.12:0,36,1291	0/0:30,0:30:83.97:0,84,2806	0/0:21,0:21:54.18:0,54,1754	0/0:40,0:40:99:0,120,4341	0/0:24,0:24:72.23:0,72,2620	0/0:22,0:22:66.21:0,66,2318	0/0:36,0:36:99:0,108,3808	0/0:27,0:27:81.28:0,81,2941	0/0:32,0:32:96.33:0,96,3488	0/0:25,0:25:75.24:0,75,2612	1/1:0,21:21:51.13:1245,51,0	1/1:1,23:24:47.89:1078,48,0	1/1:0,15:15:30.10:768,30,0	0/0:29,0:29:87.30:0,87,3275	0/0:34,0:34:99:0,102,3803	0/0:16,0:16:42.12:0,42,1347	0/0:16,0:16:48.16:0,48,1611	0/0:26,0:26:78.26:0,78,2780	0/0:29,0:29:87.30:0,87,3151	0/0:40,0:40:99:0,120,4470	1/1:0,28:28:71.90:1769,72,0	1/1:0,26:26:60.08:1348,60,0	1/1:0,12:12:5.35:90,5,0	0/0:17,0:17:51.18:0,51,1863	0/0:31,0:31:93.32:0,93,3452	0/0:28,0:28:84.27:0,84,3052	0/0:10,0:10:30.10:0,30,1095
chr10	79760810	.	A	ATTT	2033.05	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=5.095;DP=314;FS=17.534;HRun=9;HaplotypeScore=45.7025;InbreedingCoeff=0.9579;MQ=61.44;MQ0=2;MQRankSum=-0.584;QD=34.46;ReadPosRankSum=1.751;VQSLOD=1.0708;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:11:29.91:245,30,0	0/0:6,0:6:15.05:0,15,190	0/0:5,0:4:8.70:0,9,69	./.	0/0:12,0:12:33.09:0,33,417	0/0:11,0:11:30.06:0,30,366	0/0:11,0:11:21.06:0,21,265	0/0:26,0:25:57.12:0,57,691	0/0:8,0:8:15.03:0,15,190	0/0:11,0:11:30.08:0,30,368	0/0:13,0:13:38.97:0,39,438	1/1:0,7:7:21.07:414,21,0	1/1:2,5:8:15.05:280,15,0	1/1:1,11:12:27.09:513,27,0	0/0:7,0:7:21.05:0,21,252	0/0:9,0:9:27.09:0,27,341	0/0:18,0:17:48.13:0,48,606	0/0:16,0:16:45.57:0,46,536	0/0:19,0:19:48.10:0,48,593	0/0:20,0:20:51.11:0,51,618	0/0:14,0:14:39.10:0,39,478	1/1:2,4:6:12.04:237,12,0	1/1:2,8:11:21.05:357,21,0	1/1:1,3:4:9.03:178,9,0	0/0:11,0:11:18.05:0,18,227	0/0:15,0:15:42.11:0,42,523	0/0:13,0:12:33.10:0,33,417	0/0:10,0:10:27.08:0,27,341
chr10	79762535	.	TTATATA	T	203.48	PASS	AB=1.000;AC=5;AF=0.250;AN=20;BaseQRankSum=2.326;DP=115;FS=1.860;HRun=0;HaplotypeScore=27.2673;InbreedingCoeff=0.5131;MQ=75.13;MQ0=4;MQRankSum=-2.044;QD=8.85;ReadPosRankSum=1.057;VQSLOD=1.1557;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:3.01:0,3,70	./.	0/1:5,0:4:0:0,0,0	0/0:16,0:4:2.97:0,3,20	./.	./.	0/0:4,0:4:3.01:0,3,98	0/0:13,0:13:12.50:0,13,231	./.	./.	./.	./.	./.	./.	0/0:2,0:2:6.02:0,6,155	./.	0/0:7,0:11:15.05:0,15,374	1/1:9,3:11:9.03:185,9,0	./.	./.	./.	./.	./.	./.	./.	./.	0/0:2,0:2:3.01:0,3,88	1/1:2,2:6:11.62:109,12,0
chr10	79763848	.	A	AT	5257.50	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.033;DP=520;FS=15.544;HRun=0;HaplotypeScore=61.0771;InbreedingCoeff=0.9913;MQ=78.13;MQ0=0;MQRankSum=-2.236;QD=41.73;ReadPosRankSum=0.247;VQSLOD=3.5085;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:19:28.03:726,28,0	0/0:7,0:7:21.07:0,21,293	0/0:9,0:9:24.08:0,24,336	0/0:15,0:15:32.79:0,33,370	0/0:36,0:36:99:0,105,1430	0/0:15,0:15:42.13:0,42,572	0/0:4,0:4:12.03:0,12,153	0/0:27,0:27:75.25:0,75,1042	0/0:9,0:9:27.09:0,27,374	0/0:35,0:35:99:0,105,1451	0/0:17,0:17:51.16:0,51,698	1/1:4,18:22:66.19:985,66,0	1/1:4,11:15:42.04:569,42,0	1/1:3,19:22:66.20:966,66,0	0/0:18,0:18:54.18:0,54,751	0/0:16,0:16:45.14:0,45,615	0/0:27,0:27:81.24:0,81,1076	0/0:14,0:14:42.14:0,42,587	0/0:23,0:23:69.18:0,69,888	0/0:25,0:25:75.25:0,75,1041	0/0:12,0:12:36.12:0,36,503	1/1:1,6:7:18.06:281,18,0	1/1:4,19:23:66.19:956,66,0	1/1:2,16:18:51.16:773,51,0	0/0:20,0:20:60.19:0,60,807	0/0:23,0:23:69.23:0,69,962	0/0:31,0:31:90.27:0,90,1210	0/0:11,0:11:30.10:0,30,419
chr10	79763919	.	A	AT	7779.26	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-8.315;DP=524;FS=1.082;HRun=2;HaplotypeScore=53.5671;InbreedingCoeff=0.9986;MQ=75.61;MQ0=0;MQRankSum=-4.067;QD=38.13;ReadPosRankSum=1.787;VQSLOD=5.3813;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:36.12:518,36,0	0/0:11,0:11:27.08:0,27,335	0/0:10,0:10:21.06:0,21,252	0/0:16,0:16:42.11:0,42,501	0/0:23,0:23:66.19:0,66,806	1/1:0,17:17:48.16:691,48,0	0/0:11,0:11:30.09:0,30,372	0/0:28,0:28:81.25:0,81,1004	0/0:11,0:11:33.10:0,33,409	0/0:27,0:27:75.23:0,75,919	0/0:17,0:17:51.14:0,51,619	1/1:5,17:22:57.15:783,57,0	1/1:0,20:20:57.19:821,57,0	1/1:1,20:21:54.18:768,54,0	0/0:18,0:18:54.16:0,54,657	0/0:12,0:12:36.11:0,36,446	0/0:22,0:22:63.20:0,63,781	1/1:0,11:11:30.10:432,30,0	0/0:16,0:16:48.14:0,48,584	0/0:25,0:25:72.21:0,72,879	0/0:20,0:20:57.18:0,57,706	1/1:0,9:9:24.08:346,24,0	1/1:2,24:26:72.23:1020,72,0	1/1:0,18:18:50.73:734,51,0	0/0:18,0:18:54.17:0,54,669	1/1:2,20:22:25.96:804,26,0	0/0:35,0:35:99:0,105,1302	1/1:2,21:23:60.20:863,60,0
chr10	79764198	.	T	TA	3038.01	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.363;DP=526;FS=4.280;HRun=9;HaplotypeScore=64.5965;InbreedingCoeff=0.9827;MQ=78.59;MQ0=0;MQRankSum=-0.196;QD=22.50;ReadPosRankSum=2.624;VQSLOD=4.7287;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:35:84.12:912,84,0	0/0:5,0:5:15:0,15,130	0/0:24,0:25:22.28:0,22,259	0/0:20,0:20:21.97:0,22,207	0/0:24,0:24:41.50:0,41,519	0/0:18,0:18:49.74:0,50,407	0/0:15,0:16:47.03:0,47,397	0/0:33,0:33:83.91:0,84,716	0/0:18,0:18:44.94:0,45,381	0/0:27,0:27:68.98:0,69,599	0/0:19,0:19:50.85:0,51,428	1/1:4,15:19:18.56:378,19,0	1/1:2,16:18:45.12:497,45,0	1/1:5,11:17:35.93:378,36,0	0/0:15,0:15:35.86:0,36,302	0/0:7,0:7:21:0,21,182	0/0:22,0:23:64.97:0,65,542	0/0:8,0:8:17.96:0,18,153	0/0:26,0:26:56.95:0,57,487	0/0:24,0:25:58.89:0,59,478	0/0:8,0:9:22.77:0,23,188	1/1:2,15:17:39.06:418,39,0	1/1:1,16:18:9.92:320,10,0	1/1:0,11:11:30.08:332,30,0	0/0:15,0:15:32.94:0,33,279	0/0:17,0:17:41.86:0,42,351	0/0:29,0:29:65.94:0,66,564	0/0:11,0:11:29.92:0,30,251
chr10	79764520	.	T	TTC	5563.19	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.477;DP=545;FS=0.000;HRun=0;HaplotypeScore=93.9342;InbreedingCoeff=0.9908;MQ=77.55;MQ0=1;MQRankSum=-0.818;QD=44.51;ReadPosRankSum=2.081;VQSLOD=6.4642;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:57.20:1010,57,0	0/0:7,0:7:21.07:0,21,289	0/0:18,0:15:27.08:0,27,350	0/0:28,0:24:11.47:0,11,275	0/0:30,0:30:87.29:0,87,1195	0/0:21,0:21:57.17:0,57,762	0/0:24,0:24:69.19:0,69,927	0/0:26,0:26:57.19:0,57,783	0/0:15,0:15:42.14:0,42,576	0/0:25,0:25:72.24:0,72,990	0/0:23,0:23:66.22:0,66,906	1/1:3,9:12:24.08:425,24,0	1/1:2,15:18:48.16:849,48,0	1/1:1,16:17:45.15:797,45,0	0/0:28,0:28:78.25:0,78,1056	0/0:14,0:14:42.13:0,42,561	0/0:25,0:25:69.20:0,69,927	0/0:13,0:13:36.12:0,36,495	0/0:15,0:15:39.12:0,39,522	0/0:17,0:17:45.14:0,45,604	0/0:20,0:20:60.17:0,60,790	1/1:1,22:23:63.22:1117,63,0	1/1:1,16:16:38.93:691,39,0	1/1:1,15:16:39.13:675,39,0	0/0:17,0:17:48.13:0,48,616	0/0:25,0:25:75.25:0,75,1030	0/0:22,0:22:63.21:0,63,865	0/0:7,0:7:18:0,18,181
chr10	79765018	.	C	CTAA	2066.60	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.018;DP=578;FS=0.693;HRun=0;HaplotypeScore=79.1763;InbreedingCoeff=0.9414;MQ=73.66;MQ0=0;MQRankSum=-1.983;QD=57.41;ReadPosRankSum=1.858;VQSLOD=5.2097;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,2082	0/0:5,0:5:15.05:0,15,266	0/0:13,0:13:39.09:0,39,670	0/0:11,0:11:33.11:0,33,535	0/0:32,0:32:93.32:0,93,1731	0/0:13,0:13:33.11:0,33,614	0/0:14,0:14:36.12:0,36,670	0/0:33,0:33:96.32:0,96,1751	0/0:13,0:13:39.13:0,39,727	0/0:39,0:39:99:0,114,2121	0/0:21,0:21:63.21:0,63,1119	0/0:20,0:20:57.17:0,57,1029	0/0:21,0:21:57.19:0,57,1040	0/0:20,0:20:57.20:0,57,1063	0/0:33,0:33:93.32:0,93,1709	0/0:18,0:18:54.19:0,54,995	0/0:30,0:30:90.28:0,90,1643	1/1:0,11:11:30.10:671,30,0	0/0:20,0:20:54.18:0,54,963	0/0:33,0:33:96.33:0,96,1787	0/0:12,0:12:36.12:0,36,670	0/0:12,0:12:36.11:0,36,640	0/0:20,0:19:57.20:0,57,1063	0/0:17,0:17:48.16:0,48,895	0/0:22,0:22:66.22:0,66,1202	1/1:2,20:21:7.25:1314,7,0	0/0:30,0:28:84.27:0,84,1530	1/1:0,3:3:9.03:211,9,0
chr10	79765442	.	G	GA	647.53	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.295;DP=489;FS=10.906;HRun=7;HaplotypeScore=73.3205;InbreedingCoeff=0.8152;MQ=63.07;MQ0=3;MQRankSum=-5.521;QD=19.05;ReadPosRankSum=-0.623;VQSLOD=2.2256;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,20:33:63.18:742,63,0	0/0:14,0:14:42.05:0,42,400	0/0:12,0:9:23.99:0,24,220	0/0:8,0:8:14.62:0,15,111	0/0:27,0:26:69.10:0,69,666	0/0:15,0:15:42.07:0,42,405	0/0:8,0:8:24.04:0,24,232	0/0:19,0:17:39.04:0,39,370	0/0:20,0:20:31.63:0,32,470	0/0:23,0:22:60.09:0,60,579	0/0:20,0:19:51.06:0,51,487	0/0:13,0:13:27.04:0,27,261	0/0:15,0:15:24.04:0,24,232	0/0:15,0:15:39.06:0,39,376	0/0:15,0:15:33.04:0,33,319	0/0:11,0:11:33.05:0,33,319	0/0:10,0:10:2.34:0,2,202	0/0:10,0:10:27.04:0,27,261	0/0:19,0:18:51.08:0,51,492	0/0:26,0:26:69.10:0,69,666	0/0:14,0:14:27.03:0,27,261	0/0:20,0:20:57.08:0,57,551	0/0:30,0:30:81.13:0,81,781	0/0:13,0:13:23.98:0,24,222	0/0:25,0:25:69.10:0,69,660	0/0:22,0:22:61.95:0,62,569	0/0:22,0:21:63.10:0,63,608	0/0:9,0:9:24.03:0,24,229
chr10	79765473	.	G	GATA	9895.73	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-3.145;DP=531;FS=2.210;HRun=0;HaplotypeScore=73.0413;InbreedingCoeff=0.9908;MQ=73.15;MQ0=0;MQRankSum=-5.436;QD=54.08;ReadPosRankSum=3.673;VQSLOD=7.2157;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:66.14:1394,66,0	0/0:13,0:13:39.10:0,39,599	0/0:13,0:13:36.12:0,36,583	0/0:8,0:8:21.07:0,21,339	0/0:37,0:37:99:0,102,1666	0/0:15,0:15:45.14:0,45,723	0/0:15,0:15:36.11:0,36,577	0/0:32,0:32:87.21:0,87,1351	0/0:19,0:19:57.18:0,57,923	0/0:21,0:21:60.20:0,60,976	0/0:26,0:26:74.80:0,75,1199	1/1:1,15:16:42.14:948,42,0	1/1:0,19:20:39.13:882,39,0	1/1:5,13:18:39.13:881,39,0	0/0:13,0:13:39.12:0,39,627	0/0:10,0:10:27.09:0,27,450	0/0:9,0:9:24.08:0,24,393	1/1:1,12:13:36.12:796,36,0	0/0:25,0:25:75.24:0,75,1202	0/0:26,0:26:75.24:0,75,1199	0/0:13,0:13:36.12:0,36,599	1/1:1,20:21:51.18:1153,51,0	1/1:0,25:26:69.24:1562,69,0	1/1:1,8:9:18.06:407,18,0	0/0:25,0:24:75.25:0,75,1224	1/1:2,18:21:10.20:1139,10,0	0/0:28,0:27:78.22:0,78,1265	1/1:3,11:14:33.11:733,33,0
chr10	79765942	.	TAGG	T	2593.14	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.040;DP=591;FS=7.897;HRun=0;HaplotypeScore=99.6378;InbreedingCoeff=0.9885;MQ=72.22;MQ0=0;MQRankSum=-4.944;QD=42.51;ReadPosRankSum=-0.118;VQSLOD=5.0422;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:42.14:0,42,943	0/0:12,0:12:36.12:0,36,830	0/0:12,0:12:36.12:0,36,758	0/0:10,0:9:15.81:0,16,370	0/0:36,0:36:99:0,105,2420	0/0:16,0:16:48.16:0,48,1104	0/0:8,0:8:24.08:0,24,518	0/0:32,0:32:90.29:0,90,1934	0/0:19,0:19:54.19:0,54,1243	0/0:28,0:28:84.28:0,84,1896	0/0:35,0:35:99:0,105,2371	0/0:21,0:21:63.22:0,63,1453	0/0:18,0:18:54.15:0,54,1123	0/0:17,0:17:48.16:0,48,1102	0/0:23,0:23:66.21:0,66,1453	0/0:13,0:13:39.13:0,39,899	0/0:24,0:24:66.23:0,66,1503	1/1:0,13:13:29.84:511,30,0	0/0:14,0:14:39.12:0,39,806	0/0:35,0:35:99:0,105,2416	0/0:5,0:5:15.05:0,15,346	0/0:22,0:22:63.22:0,63,1453	0/0:20,0:20:60.21:0,60,1384	0/0:20,0:20:60.21:0,60,1366	0/0:28,0:28:84.29:0,84,1912	1/1:2,33:35:33.08:1560,33,0	0/0:44,0:44:99:0,126,2903	1/1:0,13:13:39.13:665,39,0
chr10	79766401	.	G	GA	3044.68	PASS	AB=0.577;AC=13;AF=0.232;AN=56;BaseQRankSum=-8.502;DP=473;FS=1.434;HRun=8;HaplotypeScore=48.7435;InbreedingCoeff=0.8594;MQ=81.47;MQ0=0;MQRankSum=-1.090;QD=24.96;ReadPosRankSum=1.889;VQSLOD=4.3661;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:54.16:621,54,0	0/0:1,0:1:3:0,3,27	0/0:17,0:16:35.51:0,36,310	0/0:16,0:16:14.51:0,15,218	0/0:19,0:19:45:0,45,406	0/0:22,1:23:28.40:0,28,510	0/0:13,0:13:33.01:0,33,302	0/0:33,0:33:81.03:0,81,741	0/0:12,0:12:36.02:0,36,330	0/0:24,0:24:69.04:0,69,632	0/0:18,0:18:38.99:0,39,350	1/1:2,11:13:36.07:401,36,0	1/1:3,13:16:36.11:415,36,0	1/1:2,21:23:60.18:692,60,0	0/0:17,0:17:51.03:0,51,467	0/0:9,0:9:21.01:0,21,192	0/0:12,0:12:30.02:0,30,274	0/0:13,0:13:15.80:0,16,209	0/0:18,0:18:42.01:0,42,384	0/0:13,0:13:33.01:0,33,302	0/0:15,0:15:25.12:0,25,364	0/1:3,11:15:22.77:308,0,23	1/1:2,19:21:42.12:485,42,0	1/1:2,11:13:27.08:312,27,0	0/0:16,0:16:45.02:0,45,412	0/0:19,0:19:45.02:0,45,412	0/0:38,0:38:99:0,105,955	0/0:5,0:5:15.01:0,15,137
chr10	79766697	.	TTATATATATATATATA	T	1973.25	PASS	AC=12;AF=0.333;AN=36;BaseQRankSum=3.137;DP=126;FS=10.278;HRun=0;HaplotypeScore=62.5470;InbreedingCoeff=0.6393;MQ=78.93;MQ0=1;MQRankSum=-3.719;QD=70.47;ReadPosRankSum=3.446;VQSLOD=2.1885;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:4:9.03:215,9,0	./.	0/0:5,0:3:3.48:0,3,78	0/0:24,0:9:9:0,9,156	./.	0/0:2,0:3:6.02:0,6,96	0/0:3,0:3:3.01:0,3,230	0/0:15,0:17:27.08:0,27,1002	0/0:2,0:4:9.03:0,9,408	0/0:4,0:6:6.02:0,6,300	./.	./.	1/1:2,1:3:6.02:268,6,0	1/1:2,2:4:9.02:258,9,0	0/0:1,0:1:3:0,3,25	./.	0/0:2,0:7:9.03:0,9,390	1/1:2,1:3:9.03:229,9,0	0/0:7,0:7:6.02:0,6,332	./.	./.	./.	./.	./.	0/0:6,0:6:6.02:0,6,177	1/1:1,2:3:6.02:268,6,0	0/0:4,0:4:6.01:0,6,255	1/1:4,5:10:24.04:874,24,0
chr10	79766712	.	TA	T	170.22	PASS	AB=0.857;AC=10;AF=0.250;AN=40;BaseQRankSum=6.248;DP=107;FS=3.699;HRun=1;HaplotypeScore=44.1759;InbreedingCoeff=0.3074;MQ=72.03;MQ0=1;MQRankSum=-4.875;QD=5.67;ReadPosRankSum=3.090;VQSLOD=0.8889;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:6.34:18,6,0	./.	0/0:6,0:3:3.01:0,3,38	0/0:29,1:9:7.36:0,7,140	0/0:1,0:1:3.01:0,3,38	0/0:4,0:4:5.45:0,5,64	0/0:1,0:1:3.01:0,3,48	0/0:13,0:13:35.03:0,35,387	0/0:3,0:3:6.64:0,7,48	0/0:2,0:2:2.70:0,3,7	0/0:1,0:1:3:0,3,26	./.	1/1:3,0:3:4.44:14,4,0	0/1:3,0:3:28.44:38,0,28	0/0:1,0:1:3.01:0,3,38	./.	0/0:7,0:7:5.67:0,6,43	0/1:3,2:5:32.49:72,0,32	0/0:3,0:3:9.02:0,9,113	./.	./.	./.	./.	./.	0/0:2,0:2:4.83:0,5,42	1/1:2,0:2:4.44:14,4,0	0/0:2,0:2:6.02:0,6,86	1/1:10,2:12:24.03:138,24,0
chr10	79766743	.	GAAATT	G	2290.35	PASS	AC=22;AF=0.407;AN=54;BaseQRankSum=8.011;DP=140;FS=16.587;HRun=0;HaplotypeScore=44.9889;InbreedingCoeff=0.7489;MQ=63.88;MQ0=0;MQRankSum=-7.843;QD=43.21;ReadPosRankSum=1.867;VQSLOD=2.0372;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,4:6:9.03:181,9,0	./.	0/0:5,0:4:9.03:0,9,250	0/0:9,0:3:3.01:0,3,35	0/0:4,0:4:12.04:0,12,362	1/1:1,5:6:15.05:277,15,0	0/0:4,0:4:12.04:0,12,362	0/0:18,0:18:42.14:0,42,1252	0/0:4,0:4:12.04:0,12,347	0/0:7,0:7:18.06:0,18,543	0/0:6,0:5:15.05:0,15,440	1/1:0,1:1:3.01:60,3,0	1/1:1,2:3:6.02:120,6,0	1/1:1,3:4:9.03:181,9,0	0/0:3,0:3:9.03:0,9,258	0/0:5,0:5:15.05:0,15,452	0/0:6,0:6:15.05:0,15,449	1/1:5,4:9:17.95:317,18,0	0/0:1,0:1:3.01:0,3,90	0/0:6,0:6:18.06:0,18,543	0/0:3,0:3:9.03:0,9,271	1/1:0,1:1:3.01:60,3,0	1/1:0,3:3:9.03:181,9,0	1/1:0,1:1:3.01:36,3,0	0/0:1,0:1:3.01:0,3,90	1/1:1,7:8:21.07:403,21,0	0/0:4,0:4:12.04:0,12,361	1/1:0,11:11:33.11:664,33,0
chr10	79767035	.	G	GT	3958.33	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.704;DP=494;FS=7.284;HRun=3;HaplotypeScore=75.0595;InbreedingCoeff=0.9922;MQ=84.61;MQ0=0;MQRankSum=-4.188;QD=35.98;ReadPosRankSum=3.373;VQSLOD=4.2742;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:36.05:479,36,0	0/0:5,0:5:12.04:0,12,144	0/0:20,0:20:50.16:0,50,561	0/0:16,0:16:28.82:0,29,325	0/0:26,0:26:75.21:0,75,883	0/0:19,0:18:54.12:0,54,611	0/0:8,0:8:24.06:0,24,277	0/0:33,0:33:84.21:0,84,954	0/0:23,0:23:66.18:0,66,768	0/0:32,0:32:96.28:0,96,1134	0/0:8,0:8:21.93:0,22,240	1/1:0,17:17:45.15:629,45,0	1/1:1,26:27:66.09:922,66,0	1/1:1,16:17:45.15:629,45,0	0/0:24,0:24:66.18:0,66,773	0/0:17,0:17:48.15:0,48,574	0/0:13,0:13:36.11:0,36,431	0/0:16,0:16:48.15:0,48,574	0/0:15,0:15:42.13:0,42,504	0/0:21,0:21:63.17:0,63,741	0/0:18,0:18:54.13:0,54,621	1/1:1,8:9:21.07:293,21,0	1/1:0,15:15:45.15:629,45,0	1/1:1,9:10:27.09:378,27,0	0/0:10,0:10:29.96:0,30,338	0/0:22,0:22:66.19:0,66,776	0/0:20,0:20:54.15:0,54,635	0/0:18,0:18:54.10:0,54,596
chr10	79767237	.	CT	C	1798.56	PASS	AB=0.676;AC=11;AF=0.196;AN=56;BaseQRankSum=14.196;DP=634;FS=12.777;HRun=2;HaplotypeScore=110.2130;InbreedingCoeff=0.6322;MQ=58.90;MQ0=9;MQRankSum=-12.481;QD=13.63;ReadPosRankSum=3.172;VQSLOD=1.8534;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,8:21:4.55:242,0,5	0/0:8,0:8:24.08:0,24,359	0/0:38,2:17:44.87:0,45,594	0/0:29,0:19:7.07:0,7,401	0/0:32,0:32:90.29:0,90,1325	0/0:18,0:18:54.16:0,54,779	0/0:19,0:19:57.19:0,57,848	0/0:25,0:25:69.21:0,69,977	0/0:25,0:25:72.23:0,72,1058	0/0:27,0:27:81.27:0,81,1193	0/0:19,0:19:57.19:0,57,846	1/1:3,15:17:43.14:352,43,0	0/1:9,8:17:24.69:264,0,25	1/1:8,12:20:11.21:344,11,0	0/0:24,0:24:72.20:0,72,1030	0/0:19,0:19:54.18:0,54,808	0/0:24,0:24:60.19:0,60,877	0/0:18,0:18:54.18:0,54,803	0/0:15,0:13:36.12:0,36,535	0/0:25,0:25:72.24:0,72,1062	0/0:26,0:25:75.24:0,75,1098	1/1:4,16:20:3.99:310,4,0	0/1:8,12:20:26.53:299,0,27	1/1:8,8:16:20.61:151,21,0	0/0:22,0:22:66.22:0,66,989	0/0:30,0:29:81.27:0,81,1209	0/0:33,0:31:99:0,99,1401	0/0:24,0:23:66.21:0,66,964
chr10	79767240	.	CCTCCTCCTCCT	C	6576.43	PASS	AB=0.793;AC=13;AF=0.232;AN=56;BaseQRankSum=14.919;DP=630;FS=1.894;HRun=0;HaplotypeScore=214.7886;InbreedingCoeff=0.9008;MQ=58.84;MQ0=8;MQRankSum=-11.542;QD=49.08;ReadPosRankSum=1.806;VQSLOD=4.7717;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,6:23:13.75:558,0,14	0/0:9,0:9:27.09:0,27,1209	0/0:41,0:17:41.26:0,41,1395	0/0:28,0:18:21.94:0,22,555	0/0:30,0:30:81.28:0,81,4290	0/0:18,0:18:54.19:0,54,2605	0/0:19,0:19:57.17:0,57,2520	0/0:23,0:23:60.20:0,60,2579	0/0:24,0:24:69.24:0,69,3820	0/0:26,0:26:75.26:0,75,4024	0/0:21,0:21:63.22:0,63,2928	1/1:2,15:16:43.99:1292,44,0	1/1:8,9:17:34.17:900,34,0	1/1:8,12:20:47.76:1191,48,0	0/0:26,0:26:72.24:0,72,3254	0/0:19,0:19:54.19:0,54,2873	0/0:22,0:22:60.21:0,60,2764	0/0:18,0:18:54.13:0,54,2458	0/0:17,0:15:42.14:0,42,1590	0/0:25,0:25:72.25:0,72,3564	0/0:25,0:24:72.25:0,72,3495	1/1:4,16:20:48.51:1305,49,0	1/1:9,12:21:42.23:889,42,0	1/1:8,8:16:16.32:442,16,0	0/0:22,0:22:66.23:0,66,3558	0/0:30,0:29:84.28:0,84,4133	0/0:31,0:29:93.31:0,93,4758	0/0:22,0:21:60.20:0,60,3026
chr10	79767251	.	T	TCTC	1862.04	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=13.846;DP=630;FS=15.284;HRun=0;HaplotypeScore=138.0753;InbreedingCoeff=0.9143;MQ=63.12;MQ0=6;MQRankSum=-9.932;QD=11.79;ReadPosRankSum=1.683;VQSLOD=2.8014;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,1:21:26.33:521,26,0	0/0:10,0:10:30.07:0,30,447	0/0:37,0:18:35.89:0,36,620	0/1:34,0:22:9.57:10,0,298	0/0:34,0:34:99:0,99,1571	0/0:25,0:25:63.21:0,63,1046	0/0:17,0:17:51.15:0,51,802	0/0:26,0:26:66.20:0,66,1033	0/0:28,0:28:78.25:0,78,1278	0/0:24,0:24:66.23:0,66,1113	0/0:23,0:23:63.22:0,63,1050	1/1:18,0:17:22.63:207,23,0	1/1:15,0:15:30.41:235,30,0	1/1:16,0:16:30.86:255,31,0	0/0:24,0:24:72.24:0,72,1185	0/0:21,0:21:63.20:0,63,1042	0/0:23,0:23:64.83:0,65,939	0/0:13,0:14:41.95:0,42,637	0/0:13,0:13:36.11:0,36,579	0/0:27,0:27:75.23:0,75,1214	0/0:22,0:21:60.18:0,60,985	1/1:24,0:24:35.59:357,36,0	1/1:18,0:18:32.34:338,32,0	1/1:9,3:12:16.19:139,16,0	0/0:25,0:25:75.26:0,75,1244	0/0:29,0:29:78.26:0,78,1293	0/0:32,0:30:93.30:0,93,1544	0/0:18,0:17:51.17:0,51,870
chr10	79767352	.	G	GA	5110.20	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.724;DP=530;FS=1.723;HRun=2;HaplotypeScore=58.3909;InbreedingCoeff=0.9562;MQ=67.83;MQ0=0;MQRankSum=-1.358;QD=35.24;ReadPosRankSum=1.475;VQSLOD=5.3025;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:39.13:561,39,0	0/0:9,0:9:27.08:0,27,334	0/0:3,0:3:9.03:0,9,108	0/0:8,0:8:2.72:0,3,123	0/0:29,0:29:87.27:0,87,1078	0/0:23,0:23:69.22:0,69,855	0/0:13,0:13:39.12:0,39,483	0/0:24,0:24:60.19:0,60,743	0/0:21,0:21:63.20:0,63,780	0/0:23,0:23:66.19:0,66,798	0/0:22,0:22:63.20:0,63,780	1/1:1,22:23:48.16:679,48,0	1/1:0,17:17:42.14:605,42,0	1/1:1,24:25:66.22:938,66,0	0/0:18,0:18:48.15:0,48,595	0/0:19,0:19:45.14:0,45,558	0/0:16,0:16:48.15:0,48,595	0/0:14,0:14:39.12:0,39,483	0/0:20,0:20:54.16:0,54,657	0/0:30,0:30:81.24:0,81,990	0/0:13,0:13:39.12:0,39,484	1/1:0,17:17:51.17:734,51,0	1/1:1,23:24:66.22:946,66,0	1/1:0,23:23:45.08:647,45,0	0/0:16,0:16:48.15:0,48,594	0/0:24,0:24:69.22:0,69,856	0/0:32,0:32:93.29:0,93,1152	0/0:8,0:8:21.07:0,21,260
chr10	79767682	.	C	CA	5052.51	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.930;DP=600;FS=1.636;HRun=4;HaplotypeScore=77.0400;InbreedingCoeff=0.9722;MQ=72.16;MQ0=0;MQRankSum=-0.616;QD=26.45;ReadPosRankSum=2.556;VQSLOD=4.1301;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:39,3:42:12.01:141,12,0	0/0:2,0:2:6.02:0,6,68	0/0:22,0:22:60.14:0,60,651	0/0:23,0:22:51.07:0,51,558	0/0:19,0:19:45.13:0,45,510	0/0:21,0:21:63.18:0,63,715	0/0:27,0:27:75.18:0,75,832	0/0:24,0:24:54.14:0,54,600	0/0:21,0:21:60.15:0,60,670	0/0:17,0:17:51.14:0,51,570	0/0:19,0:19:51.13:0,51,568	1/1:3,18:21:48.06:613,48,0	1/1:3,30:33:90.28:1158,90,0	1/1:1,21:22:57.18:728,57,0	0/0:19,0:19:54.15:0,54,612	0/0:10,0:10:27.06:0,27,297	0/0:29,0:28:81.21:0,81,906	0/0:13,0:13:30.08:0,30,340	0/0:30,0:30:78.21:0,78,873	0/0:14,0:14:36.10:0,36,408	0/0:29,0:29:87.25:0,87,987	1/1:4,11:15:31.15:375,31,0	1/1:2,21:23:60.19:765,60,0	1/1:0,35:35:99:1272,99,0	0/0:15,0:15:36.08:0,36,397	0/0:22,0:22:57.15:0,57,639	0/0:28,0:28:72.18:0,72,805	0/0:5,0:5:15.04:0,15,170
chr10	79767687	.	G	GC	5038.31	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.548;DP=581;FS=1.640;HRun=2;HaplotypeScore=75.1336;InbreedingCoeff=0.9665;MQ=74.64;MQ0=0;MQRankSum=-1.497;QD=26.80;ReadPosRankSum=2.717;VQSLOD=4.6652;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,35:43:9.96:150,10,0	0/0:2,0:2:6.02:0,6,74	0/0:23,0:23:69.05:0,69,749	0/0:22,0:21:53.96:0,54,596	0/0:18,0:18:48.15:0,48,592	0/0:21,0:21:60.19:0,60,744	0/0:24,0:24:69.22:0,69,855	0/0:21,0:21:60.19:0,60,744	0/0:20,0:20:60.19:0,60,743	0/0:17,0:17:45.14:0,45,550	0/0:17,0:17:45.14:0,45,558	1/1:22,0:22:47.06:614,47,0	1/1:32,0:32:89.30:1142,89,0	1/1:20,0:20:57.18:728,57,0	0/0:19,0:19:57.18:0,57,707	0/0:10,0:10:30.08:0,30,360	0/0:28,0:27:75.22:0,75,916	0/0:12,0:12:33.10:0,33,409	0/0:31,0:31:93.24:0,93,1122	0/0:13,0:13:39.12:0,39,482	0/0:33,0:33:99:0,99,1212	1/1:13,0:13:26.91:343,27,0	1/1:23,0:23:60.19:772,60,0	1/1:35,0:35:99:1291,101,0	0/0:14,0:14:39.12:0,39,483	0/0:19,0:19:57.18:0,57,707	0/0:24,0:24:69.22:0,69,855	0/0:5,0:5:12.04:0,12,149
chr10	79767894	.	C	CTTAG	9588.04	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-0.269;DP=484;FS=39.975;HRun=0;HaplotypeScore=89.5554;InbreedingCoeff=0.9885;MQ=68.81;MQ0=0;MQRankSum=-8.445;QD=66.12;ReadPosRankSum=3.625;VQSLOD=3.6595;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,39:42:99:2630,102,0	0/0:3,0:3:9.03:0,9,164	0/0:19,0:19:48.16:0,48,873	0/0:27,0:27:63.22:0,63,1114	0/0:15,0:15:42.14:0,42,764	0/0:14,0:14:39.10:0,39,638	0/0:16,0:16:45.15:0,45,809	0/0:27,0:27:78.26:0,78,1354	0/0:14,0:14:42.14:0,42,764	0/0:22,0:22:63.22:0,63,1146	0/0:18,0:18:48.14:0,48,811	1/1:3,11:14:36.12:919,36,0	1/1:4,18:22:57.20:1468,57,0	1/1:3,17:20:54.19:1390,54,0	0/0:14,0:14:36.12:0,36,655	0/0:13,0:13:33.11:0,33,600	0/0:14,0:14:36.12:0,36,643	0/0:21,0:21:57.20:0,57,1029	0/0:15,0:15:36.10:0,36,605	0/0:11,0:11:33.10:0,33,561	0/0:23,0:23:57.18:0,57,1006	1/1:0,14:14:42.14:1009,42,0	1/1:3,12:15:39.13:995,39,0	1/1:2,16:18:45.15:1177,45,0	0/0:11,0:11:27.09:0,27,491	0/0:21,0:21:60.21:0,60,1065	0/0:11,0:11:27.09:0,27,491	0/0:10,0:10:24.08:0,24,420
chr10	79774100	.	C	CA	360.01	PASS	AC=10;AF=1.00;AN=10;DP=45;FS=0.000;HRun=0;HaplotypeScore=20.1445;MQ=16.33;MQ0=26;QD=27.69;VQSLOD=3.4535;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:1:1.25:3,1,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:3,2:4:9.50:135,10,0	./.	./.	./.	./.	./.	1/1:1,2:3:8.96:113,9,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:36,3,0	./.	1/1:0,3:3:9.03:142,9,0	./.
chr10	79774947	.	T	TC	86.22	PASS	AB=0.938;AC=3;AF=0.088;AN=34;BaseQRankSum=3.901;DP=364;FS=6.646;HRun=3;HaplotypeScore=49.4629;InbreedingCoeff=0.5019;MQ=53.30;MQ0=29;MQRankSum=-2.512;QD=4.11;ReadPosRankSum=-2.440;VQSLOD=-0.7143;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:10,0:6:15.05:0,15,186	0/0:29,0:10:10.17:0,10,259	./.	0/0:17,0:10:11.78:0,12,148	1/1:1,5:6:12.04:163,12,0	0/0:28,0:17:39.08:0,39,466	0/0:17,0:4:12.04:0,12,149	0/0:21,0:18:37.44:0,37,480	0/0:23,0:12:33.10:0,33,407	0/0:8,0:6:9.03:0,9,112	./.	./.	./.	0/0:10,0:8:9.03:0,9,111	0/1:14,1:11:16.06:16,0,236	0/0:32,0:30:72.22:0,72,890	./.	0/0:27,0:13:36.07:0,36,417	0/0:12,0:8:18.06:0,18,223	0/0:49,0:37:86.96:0,87,1073	./.	./.	./.	0/0:13,0:9:18.06:0,18,223	./.	0/0:19,0:14:33.10:0,33,409	./.
chr10	79775312	.	ATT	A	4998.72	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.209;DP=637;FS=2.053;HRun=9;HaplotypeScore=110.4913;InbreedingCoeff=0.9987;MQ=84.53;MQ0=0;MQRankSum=-4.301;QD=27.77;ReadPosRankSum=3.577;VQSLOD=4.7822;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:33:60.16:699,60,0	0/0:11,0:11:27.09:0,27,443	0/0:26,0:26:59.96:0,60,851	0/0:21,0:21:36.98:0,37,643	0/0:31,0:31:75.21:0,75,1167	0/0:2,0:19:45.26:0,45,163	0/0:15,0:16:44.60:0,45,668	0/0:33,0:33:84.27:0,84,1334	0/0:24,0:24:63.22:0,63,1034	0/0:25,0:25:69.23:0,69,1106	0/0:14,0:14:33.11:0,33,540	1/1:0,30:30:78.22:909,78,0	1/1:0,27:27:75.22:874,75,0	1/1:1,15:16:42.12:489,42,0	0/0:26,0:27:68.72:0,69,1082	0/0:31,0:31:90.30:0,90,1453	0/0:11,0:11:33.11:0,33,532	0/0:4,0:19:37.93:0,38,147	0/0:24,0:24:54.18:0,54,876	0/0:19,0:19:57.19:0,57,934	0/0:23,0:23:63.22:0,63,1034	1/1:1,23:24:63.17:734,63,0	1/1:2,16:18:36.09:419,36,0	1/1:3,29:32:75.21:874,75,0	0/0:18,0:18:42.14:0,42,689	0/0:2,1:31:39.06:0,39,236	0/0:26,0:26:75.25:0,75,1205	0/0:0,0:8:19.96:0,20,70
chr10	79775981	.	T	TA	4448.58	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.221;DP=544;FS=2.871;HRun=4;HaplotypeScore=58.7785;InbreedingCoeff=0.9870;MQ=71.34;MQ0=0;MQRankSum=-2.301;QD=36.17;ReadPosRankSum=0.172;VQSLOD=5.1446;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:48.16:656,48,0	0/0:7,0:7:21.06:0,21,238	0/0:10,0:10:24.06:0,24,265	0/0:9,0:9:20.93:0,21,217	0/0:28,0:28:81.20:0,81,897	0/0:18,0:18:51.14:0,51,579	0/0:10,0:10:24.07:0,24,272	0/0:32,0:32:93.24:0,93,1037	0/0:18,0:18:45.13:0,45,510	0/0:34,0:34:99:0,99,1123	0/0:32,0:32:93.27:0,93,1055	1/1:1,10:11:30.10:410,30,0	1/1:0,13:13:36.12:492,36,0	1/1:0,15:15:45.15:616,45,0	0/0:18,0:18:51.15:0,51,578	0/0:17,0:17:45.13:0,45,511	0/0:3,0:3:9.03:0,9,102	0/0:14,0:14:39.09:0,39,430	0/0:25,0:25:72.19:0,72,803	0/0:32,0:32:96.26:0,96,1078	0/0:11,0:11:33.08:0,33,365	1/1:1,25:26:69.19:921,69,0	1/1:2,24:26:66.22:901,66,0	1/1:1,13:14:33.11:451,33,0	0/0:23,0:23:66.19:0,66,748	0/0:23,0:23:66.19:0,66,749	0/0:41,0:41:99:0,120,1361	0/0:16,0:16:42.12:0,42,476
chr10	79776206	.	A	ATCTGTCTG	8929.65	PASS	AB=0.660;AC=19;AF=0.339;AN=56;BaseQRankSum=2.789;DP=639;FS=27.996;HRun=0;HaplotypeScore=172.9453;InbreedingCoeff=0.8998;MQ=65.55;MQ0=0;MQRankSum=-13.728;QD=47.25;ReadPosRankSum=-3.105;VQSLOD=2.7887;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:16:21.07:717,21,0	0/0:9,0:9:27.09:0,27,701	0/0:22,0:19:21.07:0,21,465	0/0:28,0:27:51.13:0,51,1078	0/0:31,0:31:81.26:0,81,1987	0/0:4,0:28:54.18:0,54,941	0/0:17,0:17:39.06:0,39,893	0/0:37,0:37:78.15:0,78,1735	0/0:26,0:26:63.20:0,63,1546	0/0:30,0:30:84.26:0,84,2024	0/0:23,0:23:42.14:0,42,1103	1/1:13,6:19:18.06:664,18,0	1/1:14,7:21:36.58:925,37,0	1/1:9,9:18:30.09:902,30,0	0/0:31,0:31:81.28:0,81,2059	0/0:24,0:24:54.18:0,54,1348	0/0:17,0:17:48.12:0,48,1089	1/1:8,2:10:11.06:516,11,0	0/0:15,0:15:30.10:0,30,779	0/0:34,0:34:84.28:0,84,2091	0/0:25,0:25:69.24:0,69,1720	1/1:9,16:25:39.13:1136,39,0	1/1:6,15:21:30.10:823,30,0	1/1:5,9:14:9.03:245,9,0	0/0:26,0:26:51.10:0,51,1208	0/1:17,18:35:83.59:2401,0,84	0/0:27,0:27:66.22:0,66,1662	1/1:4,5:9:15.05:600,15,0
chr10	79776291	.	C	CT	2995.92	PASS	AB=0.525;AC=16;AF=0.296;AN=54;BaseQRankSum=9.528;DP=588;FS=2.162;HRun=1;HaplotypeScore=135.7585;InbreedingCoeff=0.8362;MQ=56.76;MQ0=6;MQRankSum=-11.212;QD=16.55;ReadPosRankSum=3.138;VQSLOD=4.1970;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:1,13:14:0.79:209,0,1	0/0:11,0:11:33.08:0,33,441	0/0:25,0:20:51.15:0,51,680	0/0:26,0:18:51.16:0,51,688	0/0:19,0:19:57.17:0,57,779	0/0:24,0:24:54.86:0,55,582	0/0:15,0:15:45.12:0,45,593	0/0:37,0:37:99:0,110,1476	0/0:22,0:22:61.42:0,61,821	0/0:34,0:34:99:0,99,1355	0/0:16,0:16:41.63:0,42,554	1/1:1,22:23:27.09:407,27,0	1/1:0,30:30:36.11:522,36,0	1/1:1,22:23:27.08:401,27,0	0/0:16,0:16:48.13:0,48,637	0/0:25,0:25:75.25:0,75,1047	0/0:22,0:21:60.19:0,60,821	1/1:0,2:9:6.02:92,6,0	0/0:17,0:17:48.16:0,48,671	0/0:28,0:28:84.27:0,84,1157	0/0:15,0:16:39.13:0,39,545	1/1:3,23:26:20.99:297,21,0	1/1:2,29:31:39.13:579,39,0	./.	0/0:19,0:19:28.58:0,29,326	0/1:2,12:17:17.66:590,0,18	0/0:32,0:32:96.29:0,96,1306	1/1:0,1:8:9.02:92,9,0
chr10	79776308	.	CCAT	C	2099.73	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=13.317;DP=627;FS=18.588;HRun=0;HaplotypeScore=151.1182;InbreedingCoeff=0.9195;MQ=57.50;MQ0=5;MQRankSum=-13.471;QD=16.40;ReadPosRankSum=-4.112;VQSLOD=1.4992;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,3:16:15.43:148,15,0	0/0:10,0:10:24.05:0,24,396	0/0:40,0:31:50.98:0,51,682	0/0:29,0:21:29.99:0,30,335	0/0:26,0:26:66.02:0,66,1163	0/0:24,0:24:44.95:0,45,727	0/0:19,0:19:47.99:0,48,751	0/0:34,0:33:32.70:0,33,788	0/0:28,0:28:72.17:0,72,1253	0/0:37,0:37:81.19:0,81,1294	0/0:17,0:17:36.08:0,36,588	1/1:9,6:15:35.75:339,36,0	1/1:14,5:19:36.56:298,37,0	1/1:13,7:20:36.32:356,36,0	0/0:25,0:25:69.21:0,69,1244	0/0:24,0:24:66.17:0,66,1115	0/0:25,0:24:56.78:0,57,845	0/1:12,0:12:0.02:0,0,27	0/0:20,0:20:27.86:0,28,642	0/0:30,0:30:63.14:0,63,1020	0/0:20,0:20:39.37:0,39,582	1/1:11,14:25:54.13:665,54,0	1/1:11,10:21:48.22:476,48,0	./.	0/0:20,0:20:44.95:0,45,696	0/0:16,0:16:6.45:0,6,223	0/0:33,0:33:81.21:0,81,1405	0/0:14,0:14:11.79:0,12,87
chr10	79776323	.	TCATCAACAA	T	4523.47	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.150;DP=676;FS=35.626;HRun=0;HaplotypeScore=203.0578;InbreedingCoeff=0.9619;MQ=53.41;MQ0=12;MQRankSum=-13.027;QD=36.78;ReadPosRankSum=-1.801;VQSLOD=2.9122;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,1:14:13.39:248,13,0	0/0:8,0:8:24.07:0,24,922	0/0:48,0:30:68.80:0,69,1467	0/0:34,0:20:51.12:0,51,946	0/0:29,0:28:81.28:0,81,3062	0/0:23,0:23:54.75:0,55,1620	0/0:20,0:20:60.09:0,60,1873	0/0:40,0:38:99:0,111,2492	0/0:29,0:29:84.26:0,84,3134	0/0:39,0:39:99:0,111,3724	0/0:21,0:21:60.16:0,60,1785	1/1:17,2:19:38.77:694,39,0	1/1:22,2:24:36.37:511,36,0	1/1:17,4:21:44.88:769,45,0	0/0:31,0:31:90.28:0,90,3450	0/0:25,0:25:72.22:0,72,2698	0/0:26,0:26:69.04:0,69,2069	0/0:14,0:14:28.28:0,28,501	0/0:22,0:21:54.16:0,54,1633	0/0:28,0:28:81.22:0,81,2665	0/0:22,0:21:57.60:0,58,1883	1/1:19,3:22:54.14:1360,54,0	1/1:20,3:23:53.77:940,54,0	0/0:9,0:8:0.47:0,0,1	0/0:19,0:19:48.09:0,48,1445	0/0:18,0:18:48:0,48,1123	0/0:33,0:33:96.27:0,96,3510	0/0:15,0:15:35.27:0,35,695
chr10	79776335	.	ACAACAACAT	A	4610.42	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.006;DP=688;FS=20.148;HRun=0;HaplotypeScore=198.5350;InbreedingCoeff=0.9649;MQ=52.84;MQ0=12;MQRankSum=-10.582;QD=33.90;ReadPosRankSum=-0.495;VQSLOD=3.1598;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,3:15:26.85:313,27,0	0/0:9,0:9:27.08:0,27,976	0/0:44,0:24:54.19:0,54,1246	0/0:29,0:16:48.14:0,48,1127	0/0:32,0:31:89.86:0,90,3229	0/0:22,0:22:63.21:0,63,1923	0/0:20,0:20:54.14:0,54,1787	0/0:37,0:35:99:0,104,2719	0/0:28,0:28:81.20:0,81,3169	0/0:40,0:40:99:0,120,4272	0/0:19,0:19:57.20:0,57,1991	1/1:3,16:19:24.08:579,24,0	1/1:6,17:23:17.68:377,18,0	1/1:6,16:22:33.07:750,33,0	0/0:31,0:31:93.32:0,93,3882	0/0:26,0:26:75.22:0,75,2601	0/0:20,0:20:57.10:0,57,1895	0/0:16,0:16:29.82:0,30,400	0/0:25,0:24:60.21:0,60,1993	0/0:36,0:36:99:0,108,3581	0/0:22,0:21:57.03:0,57,1920	1/1:9,14:23:60.14:1431,60,0	1/1:12,13:25:60.01:1141,60,0	1/1:0,8:8:2.96:19,3,0	0/0:22,0:22:57.20:0,57,1652	0/0:25,0:25:48.57:0,49,722	0/0:37,0:37:99:0,108,4145	0/0:12,0:12:26.30:0,26,474
chr10	79776341	.	ACAT	A	3594.58	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=11.805;DP=688;FS=0.381;HRun=0;HaplotypeScore=126.7702;InbreedingCoeff=0.9690;MQ=53.56;MQ0=10;MQRankSum=-8.331;QD=19.33;ReadPosRankSum=-1.796;VQSLOD=3.2375;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:15:23.72:142,24,0	0/0:8,0:8:21.07:0,21,409	0/0:42,0:23:25.37:0,25,410	0/0:28,0:17:36.04:0,36,496	0/0:34,0:33:56.77:0,57,1301	0/0:23,0:23:49.27:0,49,699	0/0:17,0:17:42.11:0,42,698	0/0:34,0:32:69.15:0,69,1062	0/0:30,0:30:78.20:0,78,1360	0/0:41,0:41:99:0,99,1695	0/0:22,0:22:59.99:0,60,896	1/1:18,0:18:19.30:215,19,0	1/1:19,0:19:17.93:180,18,0	1/1:21,0:21:31.26:329,31,0	0/0:33,0:33:87.27:0,87,1609	0/0:27,0:27:63.13:0,63,1015	0/0:20,0:20:43.26:0,43,686	1/1:15,4:19:18.31:486,18,0	0/0:23,0:22:27.89:0,28,673	0/0:38,0:38:83.23:0,83,1369	0/0:21,0:20:48.12:0,48,806	1/1:23,0:23:59.89:569,60,0	1/1:27,0:27:58.92:529,59,0	1/1:8,0:7:2.96:19,3,0	0/0:22,0:22:36.92:0,37,499	1/1:17,6:23:63.04:738,63,0	0/0:39,0:39:64.29:0,64,1676	1/1:11,1:12:27.09:387,27,0
chr10	79777213	.	GC	G	2091.93	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.973;DP=527;FS=0.994;HRun=5;HaplotypeScore=93.5857;InbreedingCoeff=0.9553;MQ=79.98;MQ0=0;MQRankSum=-11.299;QD=25.20;ReadPosRankSum=-0.734;VQSLOD=2.3431;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,4:8:11.95:118,12,0	0/0:13,0:13:39.13:0,39,523	0/0:18,0:18:32.45:0,32,337	0/0:12,0:12:17.80:0,18,245	0/0:34,0:34:99:0,102,1382	0/0:26,0:25:78.25:0,78,1050	0/0:25,0:25:72.22:0,72,954	0/0:28,0:28:81.27:0,81,1106	0/0:26,0:26:75.22:0,75,992	0/0:25,0:25:72.23:0,72,962	0/0:12,0:12:36.12:0,36,489	1/1:0,5:5:15.04:169,15,0	1/1:2,9:10:27.08:304,27,0	1/1:2,5:6:18.05:199,18,0	0/0:20,0:20:60.16:0,60,770	0/0:18,0:18:48.16:0,48,656	0/0:29,0:29:84.27:0,84,1128	0/0:14,0:14:33.09:0,33,431	0/0:16,0:16:39.12:0,39,516	0/0:36,0:36:99:0,105,1418	0/0:16,0:16:48.15:0,48,639	1/1:4,18:22:63.16:690,63,0	1/1:4,22:26:69.18:767,69,0	1/1:3,1:4:3.01:34,3,0	0/0:20,0:20:60.18:0,60,802	0/0:26,0:26:75.25:0,75,1021	0/0:20,0:20:60.14:0,60,774	0/0:10,0:10:30.10:0,30,409
chr10	79777230	.	TG	T	2566	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.707;DP=540;FS=3.435;HRun=3;HaplotypeScore=109.2010;InbreedingCoeff=0.9701;MQ=82.05;MQ0=0;MQRankSum=-13.442;QD=32.48;ReadPosRankSum=0.383;VQSLOD=3.2131;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:6:18.06:222,18,0	0/0:15,0:15:45.15:0,45,646	0/0:18,0:18:47.77:0,48,543	0/0:15,0:15:28.57:0,29,321	0/0:36,0:36:99:0,105,1445	0/0:24,0:23:69.23:0,69,994	0/0:25,0:25:72.23:0,72,1020	0/0:37,0:37:99:0,99,1374	0/0:25,0:25:75.25:0,75,1079	0/0:29,0:29:87.27:0,87,1220	0/0:11,0:11:33.11:0,33,470	1/1:1,5:6:15.05:183,15,0	1/1:1,13:14:39.12:480,39,0	1/1:0,4:4:12.04:146,12,0	0/0:22,0:22:66.22:0,66,948	0/0:17,0:17:48.14:0,48,672	0/0:32,0:32:90.25:0,90,1254	0/0:14,0:14:42.14:0,42,604	0/0:10,0:10:27.09:0,27,389	0/0:36,0:36:99:0,108,1535	0/0:17,0:17:48.10:0,48,614	1/1:1,20:21:63.19:769,63,0	1/1:1,25:26:72.23:883,72,0	1/1:0,2:2:6.02:74,6,0	0/0:24,0:24:66.22:0,66,950	0/0:25,0:25:75.23:0,75,1030	0/0:19,0:19:54.18:0,54,777	0/0:10,0:10:30.05:0,30,374
chr10	79777288	.	G	GTGGTGTA	7261.13	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.206;DP=552;FS=5.516;HRun=0;HaplotypeScore=188.9490;InbreedingCoeff=0.9587;MQ=80.97;MQ0=0;MQRankSum=-12.069;QD=84.43;ReadPosRankSum=1.578;VQSLOD=5.1888;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,7:9:18.06:647,18,0	0/0:8,0:8:24.08:0,24,671	0/0:20,0:20:51.18:0,51,1347	0/0:28,0:26:43.29:0,43,1546	0/0:27,0:27:78.24:0,78,2057	0/0:24,0:24:69.22:0,69,1731	0/0:37,0:37:99:0,99,2659	0/0:21,0:21:63.18:0,63,1584	0/0:27,0:27:78.27:0,78,2146	0/0:32,0:32:96.31:0,96,2560	0/0:16,0:16:48.16:0,48,1299	1/1:1,8:9:24.08:1003,24,0	1/1:4,13:16:39.13:1629,39,0	1/1:3,7:9:21.07:876,21,0	0/0:23,0:23:69.22:0,69,1797	0/0:12,0:12:36.12:0,36,940	0/0:32,0:32:96.30:0,96,2547	0/0:18,0:18:42.10:0,42,1078	0/0:12,0:12:36.12:0,36,964	0/0:28,0:28:81.22:0,81,1940	0/0:22,0:22:57.20:0,57,1563	1/1:5,7:13:27.09:997,27,0	1/1:7,19:26:51.17:1859,51,0	1/1:0,2:2:6.02:250,6,0	0/0:21,0:21:57.19:0,57,1461	0/0:31,0:31:90.29:0,90,2390	0/0:22,0:22:66.23:0,66,1844	0/0:5,0:3:6.02:0,6,134
chr10	79777338	.	TGATTG	T	4591.35	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=7.325;DP=538;FS=0.458;HRun=0;HaplotypeScore=180.9181;InbreedingCoeff=0.9831;MQ=69.38;MQ0=0;MQRankSum=-3.371;QD=52.77;ReadPosRankSum=4.509;VQSLOD=5.0825;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:26.60:0,27,170	0/0:13,0:13:36.12:0,36,1091	0/0:18,0:18:48.16:0,48,1285	0/0:12,0:12:30.10:0,30,848	0/0:22,0:22:48.15:0,48,1346	1/1:2,22:24:63.22:1279,63,0	0/0:38,0:38:99:0,111,3304	0/0:36,0:36:93.31:0,93,2665	0/0:26,0:26:72.25:0,72,2180	0/0:25,0:25:69.24:0,69,2046	0/0:16,0:16:42.14:0,42,1273	0/0:10,0:10:26.60:0,27,169	0/0:14,0:13:29.56:0,30,188	0/0:19,0:18:47.26:0,47,299	0/0:14,0:14:36.11:0,36,1019	0/0:17,0:17:48.16:0,48,1416	0/0:28,0:28:81.26:0,81,2388	1/1:1,17:18:48.16:975,48,0	0/0:23,0:23:57.19:0,57,1571	0/0:22,0:22:60.16:0,60,1666	0/0:22,0:22:57.20:0,57,1638	0/0:14,0:14:23.42:0,23,150	0/0:18,0:18:31.04:0,31,193	0/0:5,0:5:9.34:0,9,57	1/1:0,22:22:63.22:1279,63,0	1/1:4,19:23:54.18:1059,54,0	0/0:24,0:24:66.21:0,66,1809	./.
chr10	79777342	.	TGG	T	4063.03	PASS	AB=1.000;AC=20;AF=0.370;AN=54;BaseQRankSum=17.340;DP=526;FS=7.642;HRun=2;HaplotypeScore=142.3947;InbreedingCoeff=0.8532;MQ=69.03;MQ0=0;MQRankSum=-11.327;QD=24.04;ReadPosRankSum=5.036;VQSLOD=2.1911;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:30.10:476,30,0	0/0:12,0:12:36.12:0,36,732	0/0:17,0:18:54.18:0,54,1024	0/0:12,0:12:33.11:0,33,661	0/0:21,0:21:60.21:0,60,1181	1/1:23,0:23:12.37:184,12,0	0/0:40,0:40:99:0,117,2365	0/0:34,0:34:99:0,102,2024	0/0:26,0:26:78.27:0,78,1585	0/0:26,0:26:78.26:0,78,1548	0/0:17,0:17:51.17:0,51,1024	1/1:0,9:9:27.09:440,27,0	1/1:0,12:11:30.10:488,30,0	1/1:0,17:16:48.16:781,48,0	0/0:14,0:14:42.13:0,42,806	0/0:16,0:16:48.16:0,48,976	0/0:28,0:28:84.29:0,84,1696	0/1:18,0:18:3.32:130,0,3	0/0:22,0:22:66.18:0,66,1249	0/0:22,0:22:66.23:0,66,1320	0/0:23,0:23:66.20:0,66,1256	1/1:0,14:14:37.52:516,38,0	1/1:0,16:16:37.65:550,38,0	1/1:0,5:5:8.99:146,9,0	1/1:22,0:22:56.25:231,56,0	0/1:21,0:21:84.48:120,0,84	0/0:23,0:23:69.24:0,69,1402	./.
chr10	79777354	.	TAAAAAGTAAGGCAGGG	T	6601.06	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.517;DP=505;FS=15.726;HRun=0;HaplotypeScore=269.2374;InbreedingCoeff=0.9238;MQ=69.72;MQ0=4;MQRankSum=-10.246;QD=84.63;ReadPosRankSum=4.137;VQSLOD=3.2447;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,8:11:22.29:1067,22,0	0/0:11,0:11:33.10:0,33,2425	0/0:18,0:17:44.33:0,44,2534	0/0:19,0:17:47.99:0,48,2517	0/0:13,0:13:36.12:0,36,2622	0/0:25,0:25:72.20:0,72,5021	0/0:39,0:39:99:0,114,7484	0/0:31,0:29:84.26:0,84,4984	0/0:25,0:25:75.25:0,75,5127	0/0:25,0:25:75.24:0,75,5076	0/0:15,0:15:45.15:0,45,3485	1/1:1,8:9:27.01:1116,27,0	1/1:5,6:10:14.51:825,15,0	1/1:2,14:15:39.13:1781,39,0	0/0:11,0:11:33.10:0,33,2214	0/0:18,0:18:54.19:0,54,3838	0/0:25,0:25:75.26:0,75,5145	0/0:22,0:22:66.23:0,66,4810	0/0:19,0:19:57.18:0,57,3698	0/0:19,0:19:57.19:0,57,3713	0/0:20,0:20:60.18:0,60,3678	1/1:6,6:12:14.27:775,14,0	1/1:6,8:14:17.26:904,17,0	1/1:3,2:5:0.22:132,0,0	0/0:25,0:25:72.14:0,72,4571	0/0:21,0:21:63.18:0,63,4328	0/0:22,0:22:66.23:0,66,4608	0/0:4,0:3:6.02:0,6,480
chr10	79777886	.	T	TA	5544.32	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.755;DP=579;FS=10.157;HRun=1;HaplotypeScore=88.3690;InbreedingCoeff=0.9968;MQ=80.34;MQ0=1;MQRankSum=-4.221;QD=38.24;ReadPosRankSum=2.562;VQSLOD=4.9241;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,30:34:81.12:1129,81,0	0/0:5,0:5:15.05:0,15,195	0/0:31,0:30:81.24:0,81,1004	0/0:21,0:21:60.15:0,60,698	0/0:19,0:19:54.18:0,54,701	0/0:13,0:13:39.11:0,39,491	0/0:27,0:27:78.24:0,78,997	0/0:25,0:25:69.21:0,69,872	0/0:23,0:23:69.19:0,69,866	0/0:36,0:36:93.22:0,93,1186	0/0:14,0:14:42.12:0,42,531	1/1:0,16:16:42.14:629,42,0	1/1:0,16:16:48.16:719,48,0	1/1:0,23:23:60.20:898,60,0	0/0:17,0:17:51.13:0,51,644	0/0:13,0:13:39.13:0,39,506	0/0:31,0:31:87.28:0,87,1128	0/0:23,0:23:66.21:0,66,854	0/0:17,0:17:48.16:0,48,623	0/0:24,0:24:72.21:0,72,906	0/0:32,0:31:87.28:0,87,1129	1/1:0,19:19:51.13:739,51,0	1/1:0,13:13:36.12:539,36,0	1/1:2,22:24:60.20:892,60,0	0/0:12,0:12:36.12:0,36,467	0/0:20,0:20:60.18:0,60,763	0/0:20,0:20:54.16:0,54,686	0/0:11,0:11:27.09:0,27,350
chr10	79778012	.	G	GC	4112.66	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.760;DP=615;FS=32.635;HRun=1;HaplotypeScore=125.5997;InbreedingCoeff=0.9938;MQ=57.48;MQ0=3;MQRankSum=-15.035;QD=27.79;ReadPosRankSum=-2.537;VQSLOD=1.0684;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,32:37:78.20:993,78,0	0/0:10,0:10:30.10:0,30,389	0/0:25,0:21:63.12:0,63,788	0/0:28,0:24:57.13:0,57,784	0/0:33,0:33:96.30:0,96,1232	0/0:9,0:9:27.09:0,27,348	0/0:21,0:21:63.14:0,63,797	0/0:30,0:30:90.28:0,90,1156	0/0:19,0:19:57.19:0,57,740	0/0:21,0:21:63.20:0,63,818	0/0:18,0:18:51.17:0,51,662	1/1:0,13:13:36.12:498,36,0	1/1:4,11:15:39.11:526,39,0	1/1:2,21:23:66.18:866,66,0	0/0:23,0:23:66.21:0,66,856	0/0:20,0:20:57.18:0,57,739	0/0:28,0:28:78.25:0,78,1013	0/0:25,0:25:75.24:0,75,970	0/0:16,0:16:48.16:0,48,622	0/0:30,0:30:87.28:0,87,1128	0/0:24,0:24:72.23:0,72,934	1/1:2,24:26:51.16:680,51,0	1/1:1,18:19:30.10:397,30,0	1/1:3,12:15:12.04:152,12,0	0/0:22,0:22:63.20:0,63,817	0/0:22,0:22:66.19:0,66,830	0/0:34,0:34:93.28:0,93,1177	0/0:9,0:9:27.07:0,27,335
chr10	79778017	.	CTA	C	4469.92	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.733;DP=603;FS=30.929;HRun=0;HaplotypeScore=127.9269;InbreedingCoeff=0.9935;MQ=57.31;MQ0=4;MQRankSum=-15.378;QD=33.86;ReadPosRankSum=-1.066;VQSLOD=3.3804;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:81.16:1177,81,0	0/0:10,0:10:30.10:0,30,580	0/0:20,0:17:51.10:0,51,911	0/0:25,0:23:66.22:0,66,1246	0/0:32,0:32:96.33:0,96,1823	0/0:11,0:11:33.11:0,33,618	0/0:24,0:24:72.25:0,72,1344	0/0:30,0:30:90.31:0,90,1730	0/0:20,0:20:60.21:0,60,1147	0/0:23,0:23:69.24:0,69,1311	0/0:18,0:18:54.19:0,54,1036	1/1:0,12:12:33.11:508,33,0	1/1:0,11:11:33.10:475,33,0	1/1:0,20:20:60.20:896,60,0	0/0:23,0:23:69.24:0,69,1333	0/0:20,0:20:60.16:0,60,1088	0/0:28,0:28:81.28:0,81,1564	0/0:26,0:26:75.26:0,75,1447	0/0:17,0:17:51.17:0,51,956	0/0:33,0:33:96.33:0,96,1817	0/0:26,0:26:76.13:0,76,1391	1/1:0,25:25:54.18:820,54,0	1/1:0,17:18:30.09:429,30,0	1/1:1,13:14:11.78:166,12,0	0/0:22,0:22:66.23:0,66,1266	0/0:23,0:23:69.22:0,69,1285	0/0:30,0:30:90.31:0,90,1729	0/0:9,0:9:27.09:0,27,519
chr10	79778743	.	T	TA	5615.36	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=17.131;DP=716;FS=1.098;HRun=3;HaplotypeScore=89.5062;InbreedingCoeff=0.9998;MQ=77.34;MQ0=0;MQRankSum=-1.835;QD=32.65;ReadPosRankSum=1.954;VQSLOD=5.1760;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:60.20:788,60,0	0/0:11,0:11:30.09:0,30,360	0/0:17,0:17:45.10:0,45,497	0/0:25,0:25:63.19:0,63,748	0/0:41,0:41:99:0,114,1356	0/0:18,0:18:54.17:0,54,648	0/0:19,0:19:54.15:0,54,636	0/0:35,0:35:87.24:0,87,1024	0/0:26,0:26:72.22:0,72,864	0/0:42,0:42:99:0,108,1279	0/0:21,0:21:60.16:0,60,698	1/1:2,24:26:63.20:811,63,0	1/1:1,24:25:60.20:791,60,0	1/1:2,27:29:85.15:1081,85,0	0/0:27,0:27:78.23:0,78,925	0/0:26,0:26:78.24:0,78,936	0/0:26,0:26:78.23:0,78,925	0/0:17,0:17:48.15:0,48,576	0/0:26,0:26:75.22:0,75,890	0/0:28,0:28:78.24:0,78,936	0/0:21,0:21:57.17:0,57,684	1/1:1,24:25:69.16:879,69,0	1/1:3,24:27:61.44:792,61,0	1/1:0,16:16:36.12:474,36,0	0/0:33,0:33:96.29:0,96,1152	0/0:33,0:33:96.27:0,96,1133	0/0:38,0:38:99:0,114,1355	0/0:14,0:14:33.10:0,33,396
chr10	79778982	.	CA	C	995.99	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.462;DP=684;FS=1.556;HRun=2;HaplotypeScore=76.3669;InbreedingCoeff=0.9926;MQ=78.99;MQ0=0;MQRankSum=-2.171;QD=34.34;ReadPosRankSum=2.565;VQSLOD=4.1415;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1579	0/0:15,0:15:45.15:0,45,675	0/0:14,0:14:39.13:0,39,571	0/0:20,0:20:53.38:0,53,741	0/0:36,0:36:99:0,108,1617	0/0:25,0:25:72.23:0,72,1060	0/0:19,0:19:57.19:0,57,854	0/0:35,0:35:99:0,102,1494	0/0:27,0:27:81.27:0,81,1201	0/0:30,0:30:90.30:0,90,1337	0/0:17,0:16:51.17:0,51,763	0/0:25,0:25:75.25:0,75,1123	0/0:25,0:25:75.24:0,75,1102	0/0:31,0:31:93.28:0,93,1352	0/0:35,0:35:99:0,105,1555	0/0:17,0:17:48.15:0,48,700	0/0:30,0:30:90.28:0,90,1325	0/0:8,0:7:18.50:0,19,246	0/0:32,0:32:90.29:0,90,1312	0/0:21,0:21:57.19:0,57,851	0/0:27,0:27:81.27:0,81,1212	0/0:26,0:26:72.23:0,72,1059	0/0:20,0:20:60.19:0,60,879	0/0:12,0:12:36.11:0,36,520	1/1:0,29:29:84.27:1091,84,0	0/0:24,0:24:72.24:0,72,1079	0/0:34,0:34:99:0,102,1527	0/0:14,0:14:42.14:0,42,630
chr10	79779600	.	TA	T	2283.05	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=13.287;DP=414;FS=2.850;HRun=1;HaplotypeScore=52.8709;InbreedingCoeff=0.8971;MQ=62.96;MQ0=0;MQRankSum=-1.145;QD=26.86;ReadPosRankSum=3.259;VQSLOD=3.6598;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:33.11:460,33,0	0/0:11,0:11:33.11:0,33,494	0/0:2,0:2:5.99:0,6,61	0/1:2,0:2:1.03:1,0,8	0/0:27,0:27:81.19:0,81,1097	0/0:14,0:14:42.14:0,42,629	0/0:8,0:8:24.07:0,24,315	0/0:34,0:34:99:0,102,1430	0/0:11,0:11:33.09:0,33,472	0/0:17,0:17:51.17:0,51,747	0/0:34,0:34:99:0,102,1358	1/1:0,10:10:27.09:374,27,0	1/1:0,20:20:51.13:687,51,0	1/1:0,10:10:24.08:334,24,0	0/0:14,0:14:42.13:0,42,607	0/0:13,0:13:39.13:0,39,584	0/0:13,0:13:33.05:0,33,466	0/0:12,0:12:36.04:0,36,509	0/0:23,0:23:69.23:0,69,1033	0/0:25,0:25:75.21:0,75,1096	0/0:5,0:5:15.05:0,15,225	1/1:0,1:1:3.01:42,3,0	1/1:0,5:5:15.05:209,15,0	1/1:0,7:7:21.07:293,21,0	1/1:18,0:18:11.76:81,12,0	0/0:21,0:21:63.20:0,63,925	0/0:36,0:35:99:0,108,1527	0/0:9,0:9:27.01:0,27,355
chr10	79779601	.	AT	A	1172.58	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.598;DP=416;FS=2.234;HRun=6;HaplotypeScore=57.5120;InbreedingCoeff=0.8708;MQ=64.10;MQ0=0;MQRankSum=-0.528;QD=13.80;ReadPosRankSum=2.999;VQSLOD=2.6618;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:14.17:159,14,0	0/0:11,0:11:33.11:0,33,434	0/0:2,0:2:3.01:0,3,39	0/0:3,0:3:3.01:0,3,36	0/0:26,0:26:66.21:0,66,855	0/0:14,0:14:42.14:0,42,553	0/0:8,0:8:24.08:0,24,310	0/0:34,0:34:93.29:0,93,1204	0/0:11,0:11:30.10:0,30,395	0/0:17,0:17:48.16:0,48,632	0/0:32,0:32:81.25:0,81,1049	1/1:11,0:11:8.61:134,9,0	1/1:20,0:20:12.39:234,12,0	1/1:10,0:10:6.85:118,7,0	0/0:14,0:14:39.13:0,39,513	0/0:14,0:14:42.12:0,42,538	0/0:13,0:13:33.06:0,33,414	0/0:12,0:12:33.11:0,33,433	0/0:23,0:23:69.22:0,69,908	0/0:25,0:25:72.23:0,72,935	0/0:5,0:5:15.05:0,15,197	1/1:1,0:1:2.84:14,3,0	1/1:5,0:5:14.53:84,15,0	1/1:7,0:7:20.13:104,20,0	1/1:1,17:18:48.12:516,48,0	0/0:22,0:22:63.19:0,63,813	0/0:36,0:35:96.31:0,96,1262	0/0:9,0:9:21.07:0,21,276
chr10	79779815	.	TTCCTACA	T	3126.65	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.570;DP=498;FS=126.365;HRun=0;HaplotypeScore=118.5292;InbreedingCoeff=0.9224;MQ=85.04;MQ0=0;MQRankSum=-10.780;QD=52.11;ReadPosRankSum=1.862;VQSLOD=0.7311;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,4:5:12.04:312,12,0	0/0:5,0:5:15.05:0,15,600	0/0:15,0:15:45.15:0,45,1558	0/0:18,0:18:48.08:0,48,1692	0/0:29,0:29:87.30:0,87,3427	0/0:20,0:20:57.20:0,57,2258	0/0:20,0:20:60.21:0,60,2352	0/0:31,0:31:84.26:0,84,2978	0/0:14,0:14:39.13:0,39,1560	0/0:24,0:24:72.24:0,72,2698	0/0:20,0:20:60.21:0,60,2383	1/1:0,12:12:33.11:819,33,0	1/1:2,8:10:21.07:545,21,0	1/1:1,4:5:9.03:233,9,0	0/0:26,0:26:75.26:0,75,2999	0/0:35,0:35:99:0,102,3937	0/0:11,0:11:33.11:0,33,1271	0/0:14,0:14:36.12:0,36,1402	0/0:20,0:20:54.19:0,54,2131	0/0:22,0:22:66.23:0,66,2570	0/0:22,0:22:66.23:0,66,2610	1/1:2,5:7:12.04:312,12,0	1/1:1,14:15:42.14:1014,42,0	1/1:3,3:6:3:78,3,0	0/0:22,0:22:60.21:0,60,2398	0/0:27,0:27:81.19:0,81,2833	0/0:41,0:41:99:0,114,4364	0/0:2,0:2:6.02:0,6,240
chr10	79780192	.	AT	A	345.46	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.172;DP=438;FS=0.000;HRun=5;HaplotypeScore=55.8799;InbreedingCoeff=0.8575;MQ=77.55;MQ0=0;MQRankSum=-1.394;QD=21.59;ReadPosRankSum=-0.659;VQSLOD=2.5406;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:48.12:0,48,597	0/0:8,0:8:21.06:0,21,268	0/0:10,0:10:28.97:0,29,284	0/0:11,0:11:12.39:0,12,132	0/0:31,0:31:87.22:0,87,1088	0/0:11,0:11:30.10:0,30,402	0/0:7,0:7:21.07:0,21,281	0/0:24,0:24:63.20:0,63,819	0/0:18,0:18:51.17:0,51,683	0/0:17,0:17:51.15:0,51,649	0/0:15,0:15:45.15:0,45,603	0/0:9,0:9:27.09:0,27,361	0/0:10,0:10:30.09:0,30,389	0/0:12,0:12:36.11:0,36,469	0/0:10,0:10:27.09:0,27,362	0/0:13,0:13:36.10:0,36,454	0/0:26,0:26:78.20:0,78,1007	0/0:13,0:13:36.05:0,36,458	0/0:25,0:25:75.18:0,75,946	0/0:25,0:25:72.16:0,72,875	0/0:2,0:2:6.02:0,6,80	0/0:14,0:14:36.12:0,36,482	0/0:22,0:22:63.13:0,63,801	0/0:8,0:8:21.06:0,21,267	1/1:4,12:16:44.76:440,45,0	0/0:32,0:32:93.27:0,93,1182	0/0:25,0:25:75.20:0,75,970	0/0:5,0:5:15.05:0,15,201
chr10	79780614	.	GT	G	5445.09	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=16.173;DP=536;FS=2.147;HRun=2;HaplotypeScore=74.4497;InbreedingCoeff=0.9874;MQ=90.00;MQ0=0;MQRankSum=-3.684;QD=37.55;ReadPosRankSum=4.298;VQSLOD=5.5076;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:81.27:1132,81,0	0/0:6,0:6:18.06:0,18,286	0/0:27,0:27:77.63:0,78,1195	0/0:27,0:27:74.04:0,74,1093	0/0:32,0:32:96.33:0,96,1529	0/0:9,0:9:27.09:0,27,432	0/0:17,0:17:51.17:0,51,811	0/0:26,0:26:75.25:0,75,1174	0/0:23,0:23:69.19:0,69,1052	0/0:22,0:22:63.20:0,63,970	0/0:15,0:15:45.14:0,45,691	1/1:0,18:18:48.16:671,48,0	1/1:0,21:21:57.19:797,57,0	1/1:1,23:24:66.22:921,66,0	0/0:22,0:22:66.19:0,66,1008	0/0:19,0:19:57.19:0,57,911	0/0:20,0:20:57.17:0,57,876	0/0:16,0:16:42.07:0,42,613	0/0:15,0:15:42.14:0,42,669	0/0:22,0:22:66.21:0,66,1028	0/0:9,0:9:24.08:0,24,381	1/1:0,10:10:30.10:419,30,0	1/1:0,17:17:42.14:583,42,0	1/1:0,26:26:66.22:922,66,0	0/0:20,0:20:60.20:0,60,956	0/0:18,0:18:54.16:0,54,800	0/0:23,0:23:69.24:0,69,1100	0/0:3,0:3:9.03:0,9,143
chr10	79780990	.	A	AT	4579.63	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.313;DP=537;FS=12.136;HRun=0;HaplotypeScore=95.2110;InbreedingCoeff=0.9955;MQ=79.64;MQ0=0;MQRankSum=-11.717;QD=39.14;ReadPosRankSum=0.469;VQSLOD=3.9588;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:57.31:792,57,0	0/0:5,0:5:15.02:0,15,190	0/0:19,0:19:57.01:0,57,710	0/0:19,0:19:51.11:0,51,654	0/0:20,0:20:57.11:0,57,738	0/0:35,0:35:99:0,102,1388	0/0:21,0:21:63.21:0,63,881	0/0:25,0:25:66.22:0,66,922	0/0:12,0:12:36.12:0,36,503	0/0:22,0:22:66.21:0,66,883	0/0:19,0:19:54.08:0,54,679	1/1:1,11:12:36.11:520,36,0	1/1:0,14:14:39.13:585,39,0	1/1:0,19:19:54.18:798,54,0	0/0:30,0:30:87.19:0,87,1142	0/0:12,0:12:36.11:0,36,488	0/0:24,0:24:72.23:0,72,988	0/0:17,0:17:48.16:0,48,671	0/0:25,0:25:72.24:0,72,1005	0/0:23,0:23:69.20:0,69,944	0/0:22,0:22:63.21:0,63,880	1/1:0,15:15:45.11:639,45,0	1/1:0,12:12:36.08:480,36,0	1/1:0,23:23:54.57:766,55,0	0/0:14,0:14:42.10:0,42,565	0/0:28,0:28:81.23:0,81,1110	0/0:21,0:21:60.11:0,60,795	0/0:7,0:7:18.06:0,18,252
chr10	79781036	.	T	TA	2618.27	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.045;DP=574;FS=36.191;HRun=0;HaplotypeScore=106.4251;InbreedingCoeff=0.9915;MQ=85.41;MQ0=0;MQRankSum=-10.859;QD=26.18;ReadPosRankSum=3.488;VQSLOD=1.8530;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:15:37.96:441,38,0	0/0:5,0:5:15.05:0,15,210	0/0:32,0:31:54.57:0,55,1034	0/0:22,0:21:57.06:0,57,718	0/0:32,0:32:96.26:0,96,1288	0/0:28,0:28:81.25:0,81,1104	0/0:16,0:16:48.11:0,48,646	0/0:28,0:28:84.27:0,84,1157	0/0:15,0:15:45.11:0,45,607	0/0:27,0:27:78.19:0,78,1035	0/0:24,0:24:69.23:0,69,956	1/1:0,12:12:36.11:430,36,0	1/1:1,8:9:24.04:284,24,0	1/1:4,11:15:29.58:378,30,0	0/0:31,0:31:90.30:0,90,1257	0/0:20,0:20:60.20:0,60,838	0/0:24,0:24:72.19:0,72,965	0/0:18,0:18:48.16:0,48,666	0/0:21,0:21:63.21:0,63,880	0/0:22,0:22:63.18:0,63,858	0/0:20,0:20:36.29:0,36,770	1/1:0,17:17:48.15:570,48,0	1/1:1,15:16:45.14:540,45,0	1/1:5,11:16:14.03:172,14,0	0/0:19,0:19:57.19:0,57,792	0/0:27,0:27:78.26:0,78,1089	0/0:37,0:37:99:0,108,1469	0/0:6,0:6:18.06:0,18,251
chr10	79781210	.	A	AGGTAGATTAGGTTTTTGTAGGAGAAAC	2392.40	PASS	AB=0.750;AC=30;AF=0.938;AN=32;BaseQRankSum=-2.643;DP=44;FS=8.375;HRun=0;HaplotypeScore=38.0194;InbreedingCoeff=-0.1357;MQ=149.08;MQ0=0;MQRankSum=-2.327;QD=62.96;ReadPosRankSum=-1.062;VQSLOD=0.1646;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:1:0.47:1,0,0	./.	0/1:4,1:6:94.99:551,0,95	0/1:6,0:9:39.77:866,0,40	1/1:1,0:1:3.01:112,3,0	1/1:1,0:1:2.99:24,3,0	1/1:2,0:2:3.01:41,3,0	1/1:2,0:2:6.01:82,6,0	./.	1/1:4,0:4:6.01:57,6,0	1/1:1,0:1:3.01:51,3,0	./.	./.	./.	./.	./.	./.	1/1:1,0:1:2.97:20,3,0	./.	1/1:1,0:1:3.01:74,3,0	1/1:1,0:3:9.03:222,9,0	./.	1/1:1,0:1:2.99:24,3,0	./.	1/1:3,0:3:9.03:292,9,0	1/1:1,0:1:3:27,3,0	1/1:1,0:1:3.01:38,3,0	./.
chr10	79782923	.	AG	A	5916.04	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.197;DP=647;FS=1.483;HRun=2;HaplotypeScore=64.8303;InbreedingCoeff=0.9996;MQ=90.19;MQ0=0;MQRankSum=-4.390;QD=36.52;ReadPosRankSum=4.099;VQSLOD=5.4576;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:40:99:1517,117,0	0/0:14,0:14:42.13:0,42,609	0/0:31,0:31:61.24:0,61,1089	0/0:21,0:21:59.98:0,60,717	0/0:30,0:30:90.30:0,90,1348	0/0:23,0:23:66.22:0,66,987	0/0:27,0:27:81.23:0,81,1136	0/0:25,0:25:72.24:0,72,1062	0/0:17,0:17:51.16:0,51,744	0/0:24,0:24:72.24:0,72,1079	0/0:18,0:18:51.17:0,51,764	1/1:0,18:18:54.18:701,54,0	1/1:0,20:20:51.16:661,51,0	1/1:0,22:22:60.20:779,60,0	0/0:29,0:29:84.27:0,84,1237	0/0:21,0:21:57.19:0,57,854	0/0:43,0:43:99:0,129,1883	0/0:17,0:17:48.15:0,48,698	0/0:16,0:16:48.16:0,48,718	0/0:25,0:25:75.22:0,75,1066	0/0:20,0:20:60.17:0,60,855	1/1:0,19:19:57.19:740,57,0	1/1:0,17:17:45.05:584,45,0	1/1:1,25:26:72.23:934,72,0	0/0:17,0:17:51.15:0,51,724	0/0:30,0:30:90.30:0,90,1347	0/0:29,0:29:78.19:0,78,1083	0/0:8,0:8:24.08:0,24,358
chr10	79783194	.	AT	A	1344.88	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.713;DP=619;FS=0.567;HRun=5;HaplotypeScore=70.2890;InbreedingCoeff=0.8987;MQ=79.60;MQ0=0;MQRankSum=-2.036;QD=26.90;ReadPosRankSum=-1.594;VQSLOD=2.8621;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.20:0,60,818	0/0:10,0:10:27.09:0,27,366	0/0:15,0:15:24.89:0,25,396	0/0:14,0:14:29.99:0,30,372	0/0:35,0:35:93.30:0,93,1254	0/0:26,0:26:72.24:0,72,982	0/0:16,0:16:48.16:0,48,657	0/0:25,0:25:69.22:0,69,928	0/0:19,0:19:57.16:0,57,759	0/0:24,0:24:66.22:0,66,899	0/0:21,0:21:60.20:0,60,821	0/0:24,0:24:69.22:0,69,930	0/0:17,0:17:48.15:0,48,642	0/0:20,0:20:54.18:0,54,739	0/0:26,0:26:75.23:0,75,996	0/0:23,0:23:63.21:0,63,859	0/0:33,0:33:99:0,99,1328	1/1:2,14:16:0.07:338,0,0	0/0:25,0:25:72.21:0,72,940	0/0:33,0:33:96.29:0,96,1291	0/0:15,0:15:42.14:0,42,574	0/0:27,0:27:72.19:0,72,949	0/0:22,0:22:63.20:0,63,845	0/0:20,0:20:57.19:0,57,779	0/0:28,0:28:81.27:0,81,1105	1/1:0,24:24:72.17:796,72,0	0/0:28,0:28:81.27:0,81,1108	1/1:0,10:10:30.09:340,30,0
chr10	79783451	.	TTACGG	T	9052.88	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.972;DP=661;FS=6.901;HRun=0;HaplotypeScore=134.4422;InbreedingCoeff=0.9997;MQ=88.56;MQ0=0;MQRankSum=-14.306;QD=59.56;ReadPosRankSum=3.629;VQSLOD=5.7471;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:42.14:961,42,0	0/0:9,0:9:27.09:0,27,899	0/0:23,0:23:39.88:0,40,1838	0/0:32,0:32:96.29:0,96,2742	0/0:37,0:37:99:0,111,3622	0/0:28,0:28:84.29:0,84,2771	0/0:15,0:15:45.15:0,45,1498	0/0:28,0:28:84.29:0,84,2709	0/0:24,0:24:72.25:0,72,2337	0/0:30,0:30:90.30:0,90,2800	0/0:21,0:21:63.20:0,63,1952	1/1:0,16:16:48.16:1116,48,0	1/1:0,25:25:66.23:1535,66,0	1/1:0,29:29:78.27:1814,78,0	0/0:24,0:24:72.25:0,72,2398	0/0:24,0:24:72.23:0,72,2287	0/0:33,0:33:99:0,99,3277	0/0:17,0:17:51.15:0,51,1512	0/0:23,0:23:69.23:0,69,2104	0/0:34,0:34:99:0,102,3337	0/0:12,0:12:36.12:0,36,1199	1/1:0,23:23:63.22:1465,63,0	1/1:0,21:21:56.93:1325,57,0	1/1:0,20:20:36.12:836,36,0	0/0:25,0:24:75.26:0,75,2405	0/0:30,0:30:90.30:0,90,2885	0/0:30,0:30:90.31:0,90,2974	0/0:10,0:10:30.10:0,30,873
chr10	79783907	.	AG	A	3814.13	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.125;DP=546;FS=8.121;HRun=4;HaplotypeScore=75.4451;InbreedingCoeff=0.9964;MQ=83.04;MQ0=0;MQRankSum=-3.859;QD=27.24;ReadPosRankSum=4.802;VQSLOD=2.8954;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:60.18:715,60,0	0/0:13,0:13:36.11:0,36,482	0/0:13,0:13:39.08:0,39,470	0/0:20,0:19:51.13:0,51,676	0/0:19,0:19:54.18:0,54,754	0/0:21,0:21:60.16:0,60,801	0/0:24,0:24:69.21:0,69,947	0/0:27,0:26:72.21:0,72,959	0/0:15,0:15:45.07:0,45,591	0/0:25,0:25:72.21:0,72,975	0/0:24,0:24:69.20:0,69,942	1/1:1,15:16:36.11:432,36,0	1/1:1,27:28:66.20:791,66,0	1/1:0,17:17:48.13:565,48,0	0/0:18,0:17:51.17:0,51,714	0/0:17,0:17:51.17:0,51,713	0/0:22,0:22:66.22:0,66,924	0/0:9,0:9:24.08:0,24,336	0/0:22,0:22:60.17:0,60,803	0/0:26,0:26:69.21:0,69,928	0/0:25,0:25:75.23:0,75,1027	1/1:1,17:18:42.13:504,42,0	1/1:2,17:19:42.09:484,42,0	1/1:1,12:13:27.08:324,27,0	0/0:18,0:18:48.16:0,48,671	0/0:13,0:13:33.11:0,33,462	0/0:30,0:30:84.23:0,84,1148	0/0:5,0:5:15.05:0,15,210
chr10	79784447	.	CCTTCTCTAAGAGG	C	6905.96	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.207;DP=490;FS=5.885;HRun=0;HaplotypeScore=191.0201;InbreedingCoeff=0.9833;MQ=87.01;MQ0=0;MQRankSum=-12.021;QD=82.21;ReadPosRankSum=3.355;VQSLOD=4.2004;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:17:33.11:1275,33,0	0/0:7,0:7:18.06:0,18,1088	0/0:20,0:20:57.19:0,57,2805	0/0:19,0:19:54.16:0,54,2941	0/0:28,0:28:78.25:0,78,4738	0/0:15,0:15:42.14:0,42,2705	0/0:14,0:14:42.14:0,42,2384	0/0:26,0:26:69.21:0,69,3925	0/0:21,0:21:63.22:0,63,3932	0/0:24,0:24:72.25:0,72,4113	0/0:17,0:17:51.16:0,51,2841	1/1:1,7:8:21.07:839,21,0	1/1:3,11:13:33.11:1318,33,0	1/1:2,4:6:12.04:479,12,0	0/0:27,0:27:81.28:0,81,5050	0/0:17,0:17:48.16:0,48,2723	0/0:31,0:31:87.30:0,87,5525	0/0:20,0:20:54.19:0,54,3433	0/0:21,0:21:57.18:0,57,3277	0/0:18,0:18:51.18:0,51,3365	0/0:18,0:18:54.19:0,54,3451	1/1:3,13:16:36.12:1437,36,0	1/1:3,10:13:27.09:1078,27,0	1/1:2,7:7:12.04:479,12,0	0/0:16,0:16:42.14:0,42,2659	0/0:17,0:17:45.15:0,45,2903	0/0:25,0:25:75.26:0,75,4814	0/0:5,0:5:15.05:0,15,683
chr10	79784507	.	C	CAAA	4860.70	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=9.231;DP=544;FS=9.197;HRun=11;HaplotypeScore=133.4410;InbreedingCoeff=0.9027;MQ=70.68;MQ0=0;MQRankSum=-9.159;QD=25.99;ReadPosRankSum=-3.012;VQSLOD=1.9802;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:22:37.69:247,38,0	0/0:6,0:6:15.04:0,15,175	0/0:20,0:18:20.43:0,20,203	0/1:18,0:16:23.73:24,0,70	0/0:15,0:20:12.44:0,12,335	1/1:1,23:27:60.18:1065,60,0	0/0:20,0:21:52.68:0,53,617	0/0:27,0:31:50.86:0,51,623	0/0:18,0:21:43.37:0,43,477	0/0:16,0:17:28.55:0,29,348	0/0:16,0:17:32.94:0,33,358	1/1:12,6:18:46.83:679,47,0	1/1:16,5:22:43.38:649,43,0	1/1:9,4:15:39.09:585,39,0	0/0:27,0:27:53.90:0,54,630	0/0:18,0:20:49.60:0,50,576	0/0:29,0:32:87.01:0,87,955	0/0:12,0:12:24.99:0,25,121	0/0:19,0:20:47.97:0,48,529	0/0:29,0:31:61.51:0,62,714	0/0:9,0:9:27.08:0,27,316	1/1:15,2:19:40.98:561,41,0	1/1:10,9:20:42.13:721,42,0	1/1:6,0:4:9.03:144,9,0	1/1:5,0:17:25.15:187,25,0	0/0:18,0:19:31.28:0,31,263	0/0:19,0:22:49.47:0,49,559	0/0:11,0:11:20.05:0,20,120
chr10	79784518	.	A	AC	895.15	PASS	AB=0.790;AC=6;AF=0.107;AN=56;BaseQRankSum=0.222;DP=521;FS=5.865;HRun=3;HaplotypeScore=100.8422;InbreedingCoeff=0.6970;MQ=68.24;MQ0=0;MQRankSum=0.078;QD=15.17;ReadPosRankSum=1.448;VQSLOD=3.1350;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:18:1.06:75,0,1	0/0:7,0:7:21.04:0,21,228	0/0:22,0:18:23.96:0,24,331	0/0:17,0:14:29.08:0,29,300	0/0:22,0:22:49.46:0,49,521	0/0:28,0:28:45.99:0,46,256	0/0:21,0:21:50.50:0,50,628	0/0:26,0:26:57.11:0,57,652	0/0:21,0:21:53.01:0,53,531	0/0:15,0:15:38.98:0,39,424	0/0:14,0:14:39:0,39,415	0/0:18,0:20:39.57:0,40,146	0/0:18,0:17:27.56:0,28,127	0/0:11,0:13:27.56:0,28,95	0/0:29,0:29:85.85:0,86,864	0/0:19,0:19:51.83:0,52,598	0/0:33,0:33:95.95:0,96,1018	1/1:2,11:13:27.09:349,27,0	0/0:19,0:20:57.48:0,57,599	0/0:30,0:30:80.34:0,80,849	0/0:10,0:10:30.08:0,30,345	0/0:12,0:14:22.57:0,23,109	0/0:14,0:17:36.73:0,37,126	0/0:6,0:4:6.70:0,7,19	0/0:15,0:15:29.69:0,30,169	0/1:5,12:18:24.07:373,0,24	0/0:23,0:23:61.46:0,61,669	1/1:1,8:9:17.88:233,18,0
chr10	79784523	.	A	AAC	3539.02	PASS	AB=0.708;AC=13;AF=0.232;AN=56;BaseQRankSum=9.872;DP=545;FS=2.139;HRun=0;HaplotypeScore=108.9888;InbreedingCoeff=0.8752;MQ=70.61;MQ0=0;MQRankSum=-11.339;QD=29.74;ReadPosRankSum=1.699;VQSLOD=5.2624;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,7:21:14.98:539,15,0	0/0:7,0:7:21.07:0,21,316	0/0:23,0:19:45.70:0,46,591	0/0:19,0:16:39.08:0,39,513	0/0:24,0:24:66.20:0,66,963	0/0:30,0:30:67.46:0,67,987	0/0:22,0:22:66.21:0,66,972	0/0:21,0:21:63.19:0,63,914	0/0:19,0:19:54.17:0,54,793	0/0:20,0:20:51.12:0,51,718	0/0:14,0:14:42.13:0,42,613	1/1:7,10:23:40.63:838,41,0	1/1:7,8:17:9.61:630,10,0	1/1:3,5:14:18.96:455,19,0	0/0:30,0:30:87.28:0,87,1294	0/0:20,0:20:60.18:0,60,863	0/0:34,0:34:99:0,99,1457	0/0:13,0:13:29.33:0,29,246	0/0:21,0:21:62.99:0,63,830	0/0:31,0:31:87.26:0,87,1258	0/0:11,0:11:33.09:0,33,472	1/1:6,6:15:13.14:505,13,0	0/1:10,2:17:13.22:361,0,13	1/1:4,4:6:11.08:211,11,0	0/0:15,0:15:39.11:0,39,567	0/0:18,0:18:52.10:0,52,570	0/0:25,0:25:75.23:0,75,1069	0/0:9,0:9:21.03:0,21,213
chr10	79784929	.	AC	A	4623.64	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.004;DP=558;FS=7.423;HRun=2;HaplotypeScore=63.1546;InbreedingCoeff=0.9800;MQ=86.86;MQ0=0;MQRankSum=-1.576;QD=32.11;ReadPosRankSum=4.942;VQSLOD=4.3194;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:93.30:1203,93,0	0/0:3,0:3:9.03:0,9,135	0/0:23,0:23:47.06:0,47,658	0/0:28,0:26:57.58:0,58,774	0/0:30,0:30:90.20:0,90,1257	0/0:16,0:16:48.15:0,48,696	0/0:12,0:12:36.09:0,36,499	0/0:27,0:27:78.14:0,78,1101	0/0:20,0:20:60.20:0,60,897	0/0:23,0:23:69.20:0,69,961	0/0:18,0:18:54.12:0,54,713	1/1:0,18:18:48.16:622,48,0	1/1:1,18:19:42.13:534,42,0	1/1:0,26:26:66.21:854,66,0	0/0:28,0:28:81.27:0,81,1211	0/0:21,0:21:63.19:0,63,904	0/0:22,0:22:66.22:0,66,986	0/0:6,0:6:18.05:0,18,249	0/0:15,0:15:45.12:0,45,616	0/0:31,0:31:93.09:0,93,1275	0/0:23,0:23:64.46:0,64,945	1/1:1,15:16:16.15:460,16,0	1/1:1,16:17:48.11:602,48,0	1/1:0,11:11:27.09:350,27,0	0/0:15,0:15:45.11:0,45,611	0/0:24,0:24:72.23:0,72,1042	0/0:24,0:24:72.18:0,72,976	0/0:5,0:5:12.04:0,12,179
chr10	79786097	.	C	CAA	1081.62	PASS	AB=0.958;AC=25;AF=0.446;AN=56;BaseQRankSum=5.164;DP=364;FS=8.030;HRun=15;HaplotypeScore=84.9162;InbreedingCoeff=0.6183;MQ=72.77;MQ0=3;MQRankSum=-3.459;QD=6.52;ReadPosRankSum=-3.083;VQSLOD=-0.3777;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:11:11.28:71,11,0	0/1:3,0:5:10.28:10,0,43	0/0:21,0:11:7.21:0,7,39	0/0:9,0:9:3.38:0,3,16	0/0:23,1:28:9.37:0,9,269	1/1:12,0:12:13.71:86,14,0	0/0:6,0:6:2.65:0,3,23	0/1:23,0:24:2.96:3,0,202	0/0:12,0:12:19.12:0,19,162	0/0:14,0:15:24.97:0,25,207	0/0:16,0:18:31.99:0,32,229	0/1:4,0:4:0:0,0,0	1/1:12,0:12:12:113,12,0	1/1:7,0:7:6.21:68,6,0	0/0:8,0:10:1.02:0,1,131	0/0:15,0:15:25.68:0,26,193	0/0:19,0:20:26.09:0,26,231	1/1:0,0:5:9.01:87,9,0	0/0:16,0:17:23.37:0,23,174	0/1:19,1:23:0.37:0,0,214	0/0:8,0:8:16.83:0,17,119	1/1:8,0:7:3.84:21,4,0	1/1:5,0:4:4.82:33,5,0	0/1:3,0:3:0:0,0,0	1/1:20,0:19:32.85:242,33,0	1/1:4,15:19:37.64:355,38,0	0/0:13,0:17:13.99:0,14,141	1/1:1,4:6:15.04:174,15,0
chr10	79786436	.	A	AGG	3105.07	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.422;DP=532;FS=6.542;HRun=0;HaplotypeScore=103.5043;InbreedingCoeff=0.9915;MQ=89.14;MQ0=0;MQRankSum=-14.653;QD=26.09;ReadPosRankSum=1.645;VQSLOD=4.9082;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:6:16.60:186,17,0	0/0:8,0:8:24.08:0,24,390	0/0:23,0:23:66.13:0,66,973	0/0:23,0:23:68.67:0,69,1012	0/0:28,0:28:84.28:0,84,1340	0/0:7,0:7:21.07:0,21,340	0/0:8,0:8:24.08:0,24,392	0/0:34,0:34:96.32:0,96,1547	0/0:27,0:27:81.27:0,81,1296	0/0:25,0:25:75.25:0,75,1202	0/0:27,0:27:81.28:0,81,1319	1/1:4,16:20:50.47:602,50,0	1/1:4,22:26:52.19:743,52,0	1/1:2,16:18:45.62:533,46,0	0/0:26,0:26:78.24:0,78,1224	0/0:24,0:24:72.24:0,72,1150	0/0:17,0:17:51.17:0,51,830	0/0:10,0:10:30.06:0,30,451	0/0:15,0:15:42.14:0,42,684	0/0:29,0:29:87.28:0,87,1373	0/0:17,0:17:51.16:0,51,790	1/1:2,15:17:47.42:506,47,0	1/1:8,14:22:25.88:513,26,0	1/1:2,8:10:13.32:219,13,0	0/0:9,0:8:24.04:0,24,362	0/0:22,0:22:66.23:0,66,1075	0/0:23,0:23:66.21:0,66,1049	0/0:11,0:11:33.09:0,33,512
chr10	79786437	.	A	AAG	3054.41	PASS	AB=0.583;AC=12;AF=0.214;AN=56;BaseQRankSum=15.550;DP=535;FS=12.256;HRun=0;HaplotypeScore=104.0177;InbreedingCoeff=0.7404;MQ=88.22;MQ0=0;MQRankSum=-14.614;QD=24.83;ReadPosRankSum=1.820;VQSLOD=4.2219;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:6:15.93:183,16,0	0/0:8,0:8:24.08:0,24,389	0/0:23,0:23:69.19:0,69,1002	0/0:22,0:22:64.40:0,64,937	0/0:28,0:28:84.27:0,84,1338	0/0:7,0:7:21.07:0,21,341	0/0:8,0:8:24.08:0,24,392	0/0:34,0:34:99:0,102,1618	0/0:27,0:27:81.26:0,81,1294	0/0:27,0:27:75.25:0,75,1201	0/0:27,0:27:81.28:0,81,1320	0/1:4,16:20:12.08:557,0,12	1/1:6,20:28:17.29:736,17,0	1/1:2,16:18:11.69:492,12,0	0/0:26,0:26:78.24:0,78,1223	0/0:24,0:24:69.24:0,69,1123	0/0:17,0:17:51.17:0,51,831	0/0:10,0:10:30.07:0,30,460	0/0:15,0:15:42.14:0,42,685	0/0:28,0:28:84.27:0,84,1344	0/0:17,0:17:51.13:0,51,785	1/1:2,15:17:3.78:442,4,0	0/1:8,14:22:28.41:500,0,28	1/1:4,8:12:15.20:314,15,0	0/0:8,0:7:21.07:0,21,342	0/0:22,0:22:66.23:0,66,1075	0/0:23,0:23:69.20:0,69,1072	0/0:11,0:11:33.10:0,33,514
chr10	79786855	.	G	GTA	6200.46	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.525;DP=594;FS=28.603;HRun=0;HaplotypeScore=87.3025;InbreedingCoeff=0.9969;MQ=76.86;MQ0=0;MQRankSum=-3.709;QD=42.18;ReadPosRankSum=3.215;VQSLOD=3.7156;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,18:23:51.17:862,51,0	0/0:9,0:9:27.09:0,27,351	0/0:10,0:10:21.07:0,21,273	0/0:16,0:16:33.03:0,33,386	0/0:29,0:29:81.25:0,81,1038	0/0:25,0:25:66.21:0,66,858	0/0:10,0:10:24.08:0,24,311	0/0:38,0:38:87.25:0,87,1083	0/0:24,0:24:72.20:0,72,906	0/0:31,0:31:81.25:0,81,1032	0/0:17,0:17:45.15:0,45,585	1/1:2,20:22:51.17:856,51,0	1/1:5,18:23:60.20:1002,60,0	1/1:3,17:20:54.18:908,54,0	0/0:30,0:29:75.21:0,75,945	0/0:21,0:21:57.18:0,57,742	0/0:22,0:22:66.19:0,66,842	0/0:6,0:6:18.04:0,18,218	0/0:19,0:19:51.12:0,51,630	0/0:34,0:34:87.28:0,87,1131	0/0:18,0:18:39.13:0,39,507	1/1:2,19:21:57.19:963,57,0	1/1:1,21:22:63.21:1049,63,0	1/1:2,13:16:33.11:561,33,0	0/0:18,0:18:54.18:0,54,702	0/0:34,0:34:96.30:0,96,1224	0/0:24,0:24:72.23:0,72,935	0/0:12,0:12:27.09:0,27,351
chr10	79787266	.	T	TA	4840.48	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.914;DP=503;FS=3.831;HRun=8;HaplotypeScore=65.5572;InbreedingCoeff=0.9822;MQ=76.09;MQ0=0;MQRankSum=-4.970;QD=28.14;ReadPosRankSum=2.093;VQSLOD=5.5013;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:57.17:658,57,0	0/0:9,0:9:21.01:0,21,192	0/0:16,0:16:30.01:0,30,273	0/0:14,0:14:7.66:0,8,131	0/0:31,0:31:90.04:0,90,820	0/0:24,0:24:63.02:0,63,577	0/0:9,0:9:27.01:0,27,247	0/0:31,0:31:72.01:0,72,659	0/0:16,0:16:45.02:0,45,412	0/0:16,0:16:42.01:0,42,382	0/0:10,0:10:27.01:0,27,247	1/1:2,16:18:48.10:539,48,0	1/1:5,18:23:51.15:589,51,0	1/1:4,18:22:48.14:554,48,0	0/0:19,0:19:57.02:0,57,518	0/0:14,0:14:39:0,39,353	0/0:16,0:16:42.02:0,42,384	1/1:0,4:4:12.03:136,12,0	0/0:16,0:16:45.02:0,45,412	0/0:26,0:26:72.01:0,72,649	0/0:14,0:14:36.01:0,36,329	1/1:2,11:13:27.04:297,27,0	1/1:2,14:16:42.11:476,42,0	1/1:2,21:23:63.19:727,63,0	0/0:14,0:14:33.02:0,33,302	1/1:6,18:24:35.66:639,36,0	0/0:35,0:35:98.05:0,98,873	1/1:0,7:7:21.01:226,21,0
chr10	79787298	.	AG	A	1061.71	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.156;DP=544;FS=10.926;HRun=3;HaplotypeScore=83.1603;InbreedingCoeff=0.9376;MQ=78.69;MQ0=0;MQRankSum=-5.980;QD=27.22;ReadPosRankSum=1.023;VQSLOD=2.0854;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:60.17:0,60,812	0/0:9,0:9:27.07:0,27,343	0/0:16,0:16:35.80:0,36,426	0/0:16,0:16:8.58:0,9,496	0/0:25,0:25:69.22:0,69,957	0/0:30,0:30:87.10:0,87,1096	0/0:11,0:11:33.11:0,33,466	0/0:34,0:34:99:0,99,1332	0/0:23,0:23:66.15:0,66,829	0/0:15,0:15:42.12:0,42,562	0/0:13,0:13:39.12:0,39,531	0/0:19,0:19:54.18:0,54,762	0/0:29,0:29:78.23:0,78,1048	0/0:23,0:23:69.22:0,69,946	0/0:27,0:27:81.25:0,81,1111	0/0:16,0:16:48.14:0,48,643	0/0:16,0:16:45.12:0,45,595	1/1:1,2:3:5.98:74,6,0	0/0:14,0:14:42.14:0,42,593	0/0:20,0:20:60.18:0,60,813	0/0:17,0:17:45.14:0,45,618	0/0:12,0:12:33.10:0,33,448	0/0:18,0:18:51.07:0,51,673	0/0:28,0:28:81.25:0,81,1105	0/0:12,0:12:36.12:0,36,501	1/1:1,22:23:26.80:752,27,0	0/0:35,0:34:99:0,105,1422	1/1:0,13:13:30.09:370,30,0
chr10	79787572	.	TACACAC	T	214.03	PASS	AB=0.800;AC=6;AF=0.120;AN=50;BaseQRankSum=2.263;DP=334;FS=5.768;HRun=0;HaplotypeScore=79.0768;InbreedingCoeff=0.3514;MQ=56.94;MQ0=22;MQRankSum=-2.049;QD=4.12;ReadPosRankSum=0.714;VQSLOD=0.4344;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:6.49:0,6,109	0/0:5,0:5:15.04:0,15,418	1/1:24,0:4:1.25:3,1,0	./.	0/0:10,0:10:18.06:0,18,586	./.	0/0:15,0:15:27.53:0,28,660	0/0:29,0:29:32.93:0,33,597	0/0:14,0:14:20.46:0,20,386	0/0:2,0:2:3.01:0,3,98	0/0:9,0:9:15.05:0,15,452	0/0:5,0:5:6.02:0,6,154	0/0:6,0:6:0:0,0,0	./.	0/0:8,0:9:24.08:0,24,719	0/0:4,0:11:9.02:0,9,155	0/0:16,0:17:20.63:0,21,647	0/1:4,0:4:5.08:37,0,5	0/0:16,0:16:18.03:0,18,304	0/0:11,0:11:15.04:0,15,368	0/0:23,0:23:33.06:0,33,829	0/0:6,0:6:12.02:0,12,227	0/0:7,0:7:6:0,6,122	0/0:23,0:22:18.49:0,18,316	0/0:7,0:7:2.48:0,2,43	1/1:8,1:9:5.05:68,5,0	0/0:10,0:10:24.08:0,24,759	0/1:5,9:15:20.72:209,0,21
chr10	79787574	.	C	CACACAG	1132.94	PASS	AB=0.987;AC=15;AF=0.268;AN=56;BaseQRankSum=1.899;DP=350;FS=7.070;HRun=0;HaplotypeScore=92.3087;InbreedingCoeff=0.5830;MQ=56.17;MQ0=20;MQRankSum=0.226;QD=11.68;ReadPosRankSum=2.106;VQSLOD=1.7618;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:23:6.97:209,7,0	0/0:5,0:5:15.04:0,15,301	0/0:22,0:4:8.67:0,9,51	0/0:13,0:3:9.02:0,9,96	0/0:10,0:10:21.04:0,21,394	0/0:7,0:7:8.95:0,9,69	0/0:15,0:15:38.87:0,39,526	0/0:31,0:31:80.61:0,81,865	0/0:15,0:15:32.66:0,33,407	0/0:3,0:3:3.01:0,3,69	0/0:12,0:12:20.62:0,21,345	1/1:4,2:6:6.02:206,6,0	1/1:5,0:5:8.99:74,9,0	1/1:3,0:3:3:25,3,0	0/0:8,0:8:24.08:0,24,510	0/1:12,0:12:14.51:15,0,59	0/0:18,0:18:33.28:0,33,479	0/0:6,0:6:10.94:0,11,80	0/0:19,0:18:44.99:0,45,495	0/0:10,0:10:21.03:0,21,301	0/0:25,0:25:50.96:0,51,714	1/1:8,0:8:12.47:154,12,0	1/1:6,1:7:18.03:303,18,0	0/1:24,1:24:10.93:314,0,11	0/1:7,0:7:1.34:1,0,20	0/0:8,0:8:15.01:0,15,140	0/0:12,0:12:27.51:0,28,485	0/0:14,0:14:2.06:0,2,184
chr10	79787608	.	T	TAC	282.92	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=3.843;DP=405;FS=0.000;HRun=0;HaplotypeScore=73.8392;InbreedingCoeff=0.6814;MQ=62.32;MQ0=5;MQRankSum=-0.369;QD=3.88;ReadPosRankSum=-0.316;VQSLOD=1.9194;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:0.47:0,0,1	0/0:8,0:8:21.07:0,21,266	0/0:25,0:14:42.01:0,42,469	0/0:29,0:19:56.30:0,56,640	0/0:14,0:14:33.82:0,34,396	./.	0/0:15,0:15:28.29:0,28,327	0/0:28,0:28:54.17:0,54,682	0/0:12,0:12:21.06:0,21,259	0/0:9,0:9:27.08:0,27,331	0/0:12,0:12:17.85:0,18,223	1/1:10,0:10:7.71:54,8,0	1/1:3,0:3:0.47:1,0,0	1/1:7,0:7:1.41:3,1,0	0/0:16,0:16:36.59:0,37,457	0/0:13,0:13:22.31:0,22,257	0/0:22,0:22:45.39:0,45,552	0/0:5,0:5:12:0,12,132	0/0:16,0:16:33.10:0,33,410	0/0:10,0:10:27.07:0,27,329	0/0:25,0:25:38.40:0,38,485	1/1:8,0:8:6:57,6,0	1/1:12,0:12:8.64:74,9,0	1/1:24,0:23:3:32,3,0	0/1:9,0:9:19.93:201,0,20	0/0:10,0:10:27.04:0,27,308	0/0:19,0:19:54.16:0,54,667	0/0:16,0:15:24.96:0,25,292
chr10	79787650	.	A	AT	1849.18	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=6.551;DP=306;FS=4.865;HRun=4;HaplotypeScore=38.4628;InbreedingCoeff=0.9506;MQ=90.61;MQ0=0;MQRankSum=-2.807;QD=28.45;ReadPosRankSum=1.922;VQSLOD=2.6476;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:18:42.10:552,42,0	0/0:7,0:7:18.05:0,18,204	0/0:15,0:15:36.07:0,36,386	0/0:12,0:12:33.07:0,33,362	0/0:9,0:9:21.06:0,21,238	0/0:5,0:5:9.03:0,9,102	0/0:9,0:9:27.08:0,27,306	0/0:20,0:20:51.10:0,51,556	0/0:6,0:6:15.04:0,15,170	0/0:11,0:11:33.09:0,33,367	0/0:10,0:10:30.07:0,30,330	1/1:0,8:8:24.01:305,24,0	1/1:0,4:4:12.04:164,12,0	1/1:0,10:10:24.01:305,24,0	0/0:12,0:12:33.09:0,33,374	0/0:11,0:11:30.08:0,30,340	0/0:13,0:13:39.09:0,39,430	0/0:8,0:8:24.07:0,24,272	0/0:18,0:18:48.14:0,48,544	0/0:10,0:10:30.09:0,30,340	0/0:14,0:14:39.11:0,39,442	1/1:0,2:2:5.93:58,6,0	1/1:0,14:14:36.12:491,36,0	1/1:1,7:7:12.04:164,12,0	0/0:11,0:11:27.08:0,27,306	0/0:12,0:12:36.10:0,36,401	0/0:15,0:15:42.11:0,42,468	0/0:13,0:12:21.06:0,21,238
chr10	79787698	.	TTTTATTTA	T	243.12	PASS	AC=8;AF=0.222;AN=36;BaseQRankSum=3.038;DP=205;FS=13.852;HRun=0;HaplotypeScore=59.0522;InbreedingCoeff=0.5667;MQ=64.02;MQ0=6;MQRankSum=-2.541;QD=5.65;ReadPosRankSum=-0.380;VQSLOD=-0.2218;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:20:8.96:111,9,0	0/0:5,0:5:0:0,0,0	./.	./.	0/0:4,0:7:15.03:0,15,318	./.	./.	0/0:27,0:26:5.97:0,6,44	./.	./.	0/0:4,0:4:2.99:0,3,24	0/0:5,0:5:6.02:0,6,147	0/0:5,0:5:9.03:0,9,225	./.	0/0:7,0:7:6.02:0,6,168	0/0:7,0:7:9.02:0,9,268	0/0:9,0:9:18.03:0,18,626	1/1:5,1:6:3.01:74,3,0	0/0:15,0:13:15.05:0,15,471	0/0:7,0:7:9.02:0,9,267	./.	./.	0/0:5,0:5:6.02:0,6,142	./.	0/0:13,0:13:6.02:0,6,138	1/1:6,3:9:6.02:148,6,0	0/0:13,0:13:15.05:0,15,450	1/1:7,0:6:2.99:24,3,0
chr10	79787734	.	A	ATATG	166.90	PASS	AB=1.000;AC=7;AF=0.140;AN=50;BaseQRankSum=3.440;DP=180;FS=0.000;HRun=0;HaplotypeScore=48.0466;InbreedingCoeff=0.0551;MQ=47.61;MQ0=3;MQRankSum=-2.003;QD=4.17;ReadPosRankSum=4.001;VQSLOD=0.9864;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:40.03:0,40,439	0/0:2,0:2:6.02:0,6,104	0/0:3,0:1:2.99:0,3,24	0/0:5,0:3:9.03:0,9,156	0/1:9,0:9:10.03:10,0,318	0/1:4,0:4:26.85:27,0,66	0/0:2,0:2:6.02:0,6,75	0/0:25,0:21:57.17:0,57,845	./.	0/0:2,0:2:6.02:0,6,106	0/0:4,0:4:12.04:0,12,205	0/1:4,0:4:13.10:13,0,54	0/1:7,0:7:9.34:9,0,112	0/0:2,0:2:3.01:0,3,38	0/0:3,0:3:9.03:0,9,161	0/0:8,0:7:21.06:0,21,347	0/0:10,0:10:30.10:0,30,517	0/0:8,0:8:24.08:0,24,353	0/0:9,0:7:21.07:0,21,387	0/0:6,0:6:18.06:0,18,323	./.	0/0:3,0:3:6.02:0,6,76	0/1:4,0:4:15.97:29,0,16	./.	1/1:2,10:12:9.03:200,9,0	0/0:7,0:7:15:0,15,192	0/0:10,0:10:27.09:0,27,487	0/0:8,0:8:21.95:0,22,315
chr10	79787742	.	A	ATTTG	742.29	PASS	AB=1.000;AC=18;AF=0.333;AN=54;BaseQRankSum=6.794;DP=213;FS=2.918;HRun=0;HaplotypeScore=48.0649;InbreedingCoeff=0.6377;MQ=50.37;MQ0=2;MQRankSum=-5.402;QD=8.73;ReadPosRankSum=2.488;VQSLOD=1.8216;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:23.68:185,24,0	0/0:2,0:2:3:0,3,25	0/0:7,0:3:8.97:0,9,79	0/0:4,0:4:12:0,12,121	0/1:12,0:12:55.06:55,0,203	1/1:4,0:4:8.88:58,9,0	0/0:3,0:3:8.85:0,9,59	0/0:26,0:22:55.75:0,56,429	0/0:4,0:4:11.98:0,12,99	0/0:2,0:2:5.04:0,5,34	0/0:7,0:7:17.98:0,18,149	1/1:1,4:5:3.48:74,3,0	1/1:3,4:8:5.47:129,5,0	1/1:3,0:3:2.94:18,3,0	0/0:7,0:7:20.99:0,21,199	0/0:8,0:7:21:0,21,236	0/0:15,0:15:38.92:0,39,430	0/0:8,0:8:23.86:0,24,180	0/0:9,0:7:20.97:0,21,278	0/0:7,0:7:21:0,21,237	0/0:1,0:1:3:0,3,25	1/1:4,0:4:8.81:53,9,0	1/1:0,5:7:6.02:145,6,0	./.	1/1:13,0:13:17.75:199,18,0	0/0:7,0:7:17.96:0,18,151	0/0:11,0:11:33.01:0,33,407	0/1:7,0:7:3.09:3,0,113
chr10	79788741	.	CT	C	5019.54	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=17.797;DP=725;FS=5.733;HRun=6;HaplotypeScore=102.9864;InbreedingCoeff=0.9997;MQ=62.65;MQ0=1;MQRankSum=-0.063;QD=26.14;ReadPosRankSum=3.491;VQSLOD=4.7997;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:39.10:419,39,0	0/0:10,0:10:27.09:0,27,355	0/0:18,0:17:50.81:0,51,584	0/0:14,0:13:30.05:0,30,335	0/0:40,0:40:99:0,117,1498	0/0:32,0:32:90.29:0,90,1184	0/0:20,0:20:51.16:0,51,657	0/0:34,0:34:87.27:0,87,1129	0/0:26,0:26:78.21:0,78,982	0/0:23,0:23:66.21:0,66,857	0/0:24,0:24:66.21:0,66,868	1/1:3,17:20:51.12:548,51,0	1/1:4,37:41:99:1119,105,0	1/1:2,27:29:75.19:806,75,0	0/0:26,0:26:72.21:0,72,919	0/0:26,0:26:72.22:0,72,933	0/0:29,0:29:78.24:0,78,1012	0/0:27,0:26:72.22:0,72,931	0/0:21,0:20:51.17:0,51,670	0/0:35,0:35:96.30:0,96,1250	0/0:22,0:22:60.19:0,60,788	1/1:3,19:22:42.10:451,42,0	1/1:2,33:34:81.13:870,81,0	1/1:0,28:28:75.19:806,75,0	0/0:24,0:23:63.17:0,63,810	0/0:34,0:34:99:0,102,1342	0/0:30,0:30:84.21:0,84,1043	0/0:18,0:18:51.15:0,51,655
chr10	79790470	.	G	GT	3179.56	PASS	AC=48;AF=1.000;AN=48;DP=160;FS=0.000;HRun=1;HaplotypeScore=41.2999;InbreedingCoeff=0.2034;MQ=34.57;MQ0=0;QD=20.65;VQSLOD=3.6177;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:8.99:110,9,0	1/1:2,1:3:2.98:22,3,0	1/1:3,0:1:2.98:22,3,0	./.	1/1:0,5:5:1.41:2,1,0	1/1:3,4:7:11.93:107,12,0	./.	./.	1/1:1,10:11:24:291,24,0	1/1:0,4:4:12.04:173,12,0	1/1:0,4:4:3.01:45,3,0	1/1:0,5:5:14.91:149,15,0	1/1:1,9:10:21.04:287,21,0	1/1:0,7:7:17.98:219,18,0	1/1:1,9:10:14.96:165,15,0	1/1:0,12:12:18:222,18,0	1/1:0,7:7:11.96:131,12,0	1/1:1,5:6:9.03:134,9,0	1/1:2,9:10:24.08:356,24,0	1/1:0,7:7:0.94:1,1,0	./.	1/1:0,4:4:6.13:28,6,0	1/1:0,5:5:6.45:65,6,0	1/1:2,5:7:5.97:64,6,0	1/1:2,4:6:9.02:118,9,0	1/1:0,4:4:12.04:176,12,0	1/1:0,10:10:21.03:283,21,0	1/1:0,3:3:6.02:88,6,0
chr10	79790474	.	A	AG	1850.91	PASS	AB=0.528;AC=44;AF=0.957;AN=46;DP=142;FS=0.000;HRun=2;HaplotypeScore=41.9720;InbreedingCoeff=0.2796;MQ=34.00;MQ0=0;QD=13.61;VQSLOD=2.4914;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:8.83:54,9,0	./.	1/1:1,1:1:3.01:34,3,0	./.	0/1:1,4:5:0.01:0,0,0	1/1:1,3:4:8.83:54,9,0	./.	./.	1/1:0,10:10:17.69:111,18,0	1/1:0,4:4:12.04:173,12,0	1/1:0,4:4:0.47:1,0,0	1/1:0,4:4:8.85:56,9,0	1/1:0,9:9:14.79:116,15,0	1/1:0,7:7:17.41:97,17,0	1/1:1,8:9:11.83:88,12,0	1/1:0,12:12:17.65:108,18,0	1/1:0,7:7:11.90:126,12,0	1/1:1,4:5:8.96:107,9,0	1/1:2,7:9:21.07:303,21,0	0/1:0,7:7:0.01:0,0,0	./.	1/1:0,4:4:2.78:17,3,0	1/1:0,5:5:5.74:36,6,0	1/1:0,5:5:2.96:19,3,0	1/1:0,4:4:5.88:36,6,0	1/1:0,4:4:12.04:176,12,0	1/1:0,10:10:9.03:130,9,0	1/1:0,3:3:6.02:88,6,0
chr10	79791052	.	ACTTGATGC	A	3223.06	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.014;DP=462;FS=75.286;HRun=0;HaplotypeScore=109.6084;InbreedingCoeff=0.9645;MQ=47.31;MQ0=9;MQRankSum=-8.379;QD=46.71;ReadPosRankSum=1.912;VQSLOD=0.4733;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,17:23:24.08:658,24,0	0/0:7,0:7:21.07:0,21,780	0/0:29,0:14:42.14:0,42,1756	0/0:36,0:16:41.11:0,41,1891	0/0:16,0:16:45.15:0,45,1932	0/0:11,0:11:30.10:0,30,1317	0/0:30,0:29:72.22:0,72,2856	0/0:23,0:23:69.24:0,69,2904	0/0:23,0:23:69.24:0,69,2967	0/0:21,0:21:57.20:0,57,2395	0/0:11,0:11:27.09:0,27,1187	1/1:1,7:8:15.05:419,15,0	1/1:2,9:11:27.09:755,27,0	1/1:0,7:7:21.07:587,21,0	0/0:21,0:21:60.21:0,60,2543	0/0:27,0:27:75.26:0,75,3168	0/0:21,0:20:51.18:0,51,2139	0/0:20,0:20:60.21:0,60,2502	0/0:9,0:8:21.07:0,21,913	0/0:15,0:15:42.11:0,42,1580	0/0:20,0:20:57.20:0,57,2373	1/1:1,6:7:18.06:498,18,0	1/1:1,5:6:12.04:329,12,0	1/1:2,5:7:6.02:168,6,0	0/0:15,0:15:42.14:0,42,1788	0/0:12,0:12:33.11:0,33,1301	0/0:21,0:21:60.21:0,60,2433	0/0:5,0:5:15.05:0,15,590
chr10	79791256	.	T	TCCTTC	8544.69	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-9.874;DP=558;FS=3.698;HRun=0;HaplotypeScore=100.0454;InbreedingCoeff=0.9912;MQ=81.08;MQ0=0;MQRankSum=-5.493;QD=70.62;ReadPosRankSum=1.721;VQSLOD=6.4221;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:24:57.15:1556,57,0	0/0:5,0:5:15.05:0,15,299	0/0:26,0:26:45.73:0,46,1289	0/0:22,0:22:36.49:0,36,822	0/0:26,0:26:66.21:0,66,1388	0/0:22,0:22:63.21:0,63,1346	0/0:28,0:28:75.26:0,75,1626	0/0:29,0:29:84.28:0,84,1740	0/0:26,0:26:78.27:0,78,1691	0/0:18,0:18:51.17:0,51,1062	0/0:17,0:17:39.13:0,39,844	1/1:1,11:13:30.10:943,30,0	1/1:1,14:18:42.03:1263,42,0	1/1:0,18:18:48.16:1513,48,0	0/0:21,0:21:63.22:0,63,1367	0/0:27,0:27:78.25:0,78,1634	0/0:23,0:23:63.19:0,63,1304	0/0:11,0:11:33.05:0,33,600	0/0:19,0:19:57.18:0,57,1170	0/0:18,0:18:54.17:0,54,1081	0/0:28,0:28:78.25:0,78,1623	1/1:3,10:13:36.12:1013,36,0	1/1:1,10:12:30.10:933,30,0	1/1:1,19:23:42.14:1324,42,0	0/0:16,0:16:48.15:0,48,1001	0/0:25,0:25:75.25:0,75,1587	0/0:26,0:26:69.23:0,69,1416	0/0:4,0:4:12.04:0,12,260
chr10	79791448	.	ATT	A	5017.47	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=9.663;DP=603;FS=3.609;HRun=11;HaplotypeScore=83.3816;InbreedingCoeff=0.9859;MQ=64.26;MQ0=0;MQRankSum=-0.811;QD=22.91;ReadPosRankSum=5.024;VQSLOD=4.7137;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,26:31:59.73:721,60,0	0/0:12,0:12:33.11:0,33,497	0/0:12,0:9:11.34:0,11,145	0/0:11,0:11:23.46:0,23,220	0/0:38,0:39:98.62:0,99,1376	0/0:2,0:22:42.42:0,42,145	0/0:10,0:10:24.08:0,24,369	0/0:19,0:18:39.11:0,39,552	0/0:16,0:16:45.12:0,45,631	0/0:37,0:37:87.26:0,87,1228	0/0:26,0:25:64.40:0,64,847	1/1:4,20:24:54.10:575,54,0	1/1:5,21:26:57.12:607,57,0	1/1:3,16:19:45.06:479,45,0	0/0:24,0:25:71.68:0,72,1014	0/0:21,0:22:63.20:0,63,949	0/0:40,0:43:99:0,116,1631	1/1:6,17:23:29.27:489,29,0	0/0:14,0:16:39.12:0,39,546	0/0:27,0:27:78.18:0,78,1069	0/0:16,0:16:39.60:0,40,578	1/1:1,22:23:60.14:637,60,0	1/1:3,19:22:15.91:389,16,0	1/1:0,18:18:45.11:479,45,0	0/0:1,0:9:17.47:0,17,60	1/1:5,19:24:51:514,51,0	0/0:21,0:20:51.13:0,51,733	1/1:4,4:8:12.01:128,12,0
chr10	79791882	.	C	CCA	12385.11	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=9.725;DP=664;FS=0.000;HRun=0;HaplotypeScore=91.2319;InbreedingCoeff=0.9971;MQ=57.83;MQ0=1;MQRankSum=0.054;QD=44.87;ReadPosRankSum=2.425;VQSLOD=5.8878;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,37:42:96.33:1774,96,0	0/0:17,0:17:51.17:0,51,749	0/0:17,0:13:29.88:0,30,374	0/0:14,0:13:24:0,24,297	0/0:30,0:30:87.29:0,87,1281	1/1:2,15:18:42.14:787,42,0	0/0:22,0:22:63.21:0,63,921	0/0:29,0:29:81.26:0,81,1173	0/0:16,0:16:45.15:0,45,663	0/0:28,0:28:84.28:0,84,1236	0/0:15,0:15:45.12:0,45,622	1/1:0,20:20:54.19:1009,54,0	1/1:3,29:32:84.09:1556,84,0	1/1:2,27:29:66.23:1210,66,0	0/0:38,0:38:99:0,114,1658	0/0:23,0:23:69.23:0,69,1016	0/0:23,0:23:69.23:0,69,1016	1/1:0,17:17:45.15:843,45,0	0/0:30,0:30:84.28:0,84,1237	0/0:30,0:30:78.26:0,78,1144	0/0:27,0:27:72.24:0,72,1057	1/1:3,14:17:33.11:618,33,0	1/1:2,21:24:54.19:1009,54,0	1/1:1,13:14:24.08:449,24,0	1/1:2,24:26:66.23:1236,66,0	1/1:2,28:31:49.12:1613,49,0	0/0:29,0:29:81.27:0,81,1190	1/1:0,6:6:15.05:281,15,0
chr10	79792516	.	GGGTGGTCCCTTAGCCATCAATCGCTAACTAAGAAAT	G	10107.02	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=10.115;DP=608;FS=9.085;HRun=0;HaplotypeScore=531.9475;InbreedingCoeff=0.9193;MQ=79.24;MQ0=0;MQRankSum=-10.087;QD=97.18;ReadPosRankSum=5.737;VQSLOD=1.2797;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,17:30:39.13:3553,39,0	0/0:14,0:14:42.14:0,42,6040	0/0:22,0:21:63.22:0,63,3851	0/0:18,0:18:51.16:0,51,2974	0/0:28,0:28:84.29:0,84,9688	0/0:18,0:18:51.18:0,51,6712	0/0:26,0:26:78.27:0,78,10385	0/0:39,0:39:99:0,114,9209	0/0:37,0:37:99:0,102,13613	0/0:31,0:31:90.30:0,90,12392	0/0:20,0:20:60.21:0,60,7572	1/1:11,11:22:15.05:1417,15,0	1/1:11,14:25:33.11:3118,33,0	1/1:9,8:17:18.06:1701,18,0	0/0:33,0:33:99:0,99,13721	0/0:36,0:36:99:0,108,12419	0/0:27,0:27:78.27:0,78,9534	0/0:8,0:8:24.01:0,24,2545	0/0:12,0:12:33.11:0,33,3390	0/0:22,0:22:66.23:0,66,8900	0/0:24,0:24:69.22:0,69,8400	0/1:1,0:1:0:0,0,0	./.	1/1:7,2:9:6.02:317,6,0	0/0:13,0:13:33.10:0,33,4076	0/0:29,0:29:84.29:0,84,10015	0/0:41,0:41:99:0,120,16840	0/0:3,0:3:9.01:0,9,1023
chr10	79792801	.	C	CACGCACACAA	8101.07	PASS	AB=0.545;AC=13;AF=0.232;AN=56;BaseQRankSum=1.003;DP=712;FS=0.000;HRun=0;HaplotypeScore=192.3225;InbreedingCoeff=0.9225;MQ=60.56;MQ0=4;MQRankSum=-11.676;QD=51.27;ReadPosRankSum=-4.847;VQSLOD=3.2031;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:5,19:30:2.14:1273,0,2	0/0:15,0:15:45.15:0,45,1365	0/0:21,0:13:25.87:0,26,373	0/0:33,0:20:9.38:0,9,401	0/0:30,0:30:84.29:0,84,2646	0/0:23,0:23:69.22:0,69,2129	0/0:22,0:22:63.18:0,63,1748	0/0:45,0:45:99:0,126,3339	0/0:28,0:28:81.25:0,81,2379	0/0:43,0:43:99:0,126,3894	0/0:20,0:20:60.14:0,60,1734	1/1:0,14:23:30.10:1475,30,0	1/1:1,23:27:45.15:2133,45,0	1/1:2,17:23:30.10:1271,30,0	0/0:26,0:26:75.21:0,75,2271	0/0:35,0:35:99:0,102,3135	0/0:17,0:17:51.13:0,51,1493	0/0:8,0:8:20.94:0,21,496	0/0:17,0:16:45.10:0,45,1137	0/0:37,0:37:99:0,99,2912	0/0:30,0:30:90.03:0,90,2418	1/1:0,11:14:21.03:692,21,0	1/1:0,13:18:21.07:825,21,0	1/1:0,16:23:14.83:432,15,0	0/0:35,0:35:99:0,99,2917	0/0:23,0:23:69.20:0,69,1847	0/0:39,0:39:98.49:0,98,3395	0/0:7,0:7:21.05:0,21,624
chr10	79793173	.	C	CAA	6153.43	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=7.745;DP=650;FS=1.992;HRun=7;HaplotypeScore=88.9469;InbreedingCoeff=0.9963;MQ=83.24;MQ0=0;MQRankSum=-1.945;QD=25.22;ReadPosRankSum=2.313;VQSLOD=4.1337;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,1:14:15.03:153,15,0	0/0:12,0:12:36.11:0,36,419	0/0:24,0:24:44.62:0,45,495	0/0:16,0:16:35.56:0,36,394	0/0:27,0:27:69.19:0,69,803	1/1:2,16:18:45.15:738,45,0	0/0:23,0:23:60.17:0,60,699	0/0:34,0:34:84.22:0,84,969	0/0:33,0:33:47.43:0,47,768	0/0:24,0:24:63.17:0,63,734	0/0:24,0:24:69.20:0,69,802	1/1:6,0:19:27.05:272,27,0	1/1:8,1:29:35.90:379,36,0	1/1:2,0:24:42.07:407,42,0	0/0:36,0:36:93.24:0,93,1072	0/0:23,0:23:60.18:0,60,699	0/0:16,0:16:42.08:0,42,464	1/1:3,5:9:18.06:276,18,0	0/0:15,0:15:39.10:0,39,454	0/0:39,0:39:99:0,117,1363	0/0:29,0:29:84.11:0,84,923	1/1:6,0:25:51.02:494,51,0	1/1:2,1:19:42.08:446,42,0	1/1:2,0:17:27.04:261,27,0	1/1:0,24:24:60.20:985,60,0	1/1:5,23:29:72.22:1155,72,0	0/0:31,0:31:90.24:0,90,1027	1/1:4,13:17:36.12:587,36,0
chr10	79793496	.	GCTTCCCTA	G	5543.87	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.423;DP=634;FS=3.475;HRun=0;HaplotypeScore=169.8686;InbreedingCoeff=0.9851;MQ=85.10;MQ0=1;MQRankSum=-13.275;QD=45.44;ReadPosRankSum=0.854;VQSLOD=4.7925;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:18.06:502,18,0	0/0:10,0:10:30.10:0,30,1265	0/0:25,0:25:68.94:0,69,2382	0/0:22,0:22:51.17:0,51,2019	0/0:30,0:30:81.28:0,81,3472	0/0:19,0:19:57.18:0,57,2317	0/0:24,0:24:69.22:0,69,2794	0/0:33,0:33:93.28:0,93,3774	0/0:35,0:35:99:0,102,4441	0/0:24,0:24:66.23:0,66,2895	0/0:34,0:34:99:0,99,4014	1/1:0,20:20:54.19:1433,54,0	1/1:4,12:16:27.09:649,27,0	1/1:3,19:22:51.13:1266,51,0	0/0:30,0:29:84.28:0,84,3591	0/0:30,0:30:78.27:0,78,3378	0/0:17,0:17:51.18:0,51,2232	0/0:14,0:14:39.13:0,39,1564	0/0:14,0:14:42.14:0,42,1741	0/0:34,0:34:99:0,99,4287	0/0:17,0:17:51.18:0,51,2117	1/1:6,11:17:33.07:774,33,0	1/1:3,10:13:24.08:670,24,0	1/1:5,13:18:8.77:251,9,0	0/0:20,0:19:57.20:0,57,2270	0/0:38,0:38:99:0,108,4483	0/0:36,0:36:99:0,108,4605	0/0:6,0:6:18.06:0,18,642
chr10	79793809	.	ATATATATAT	A	6578.11	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.360;DP=462;FS=17.246;HRun=0;HaplotypeScore=169.1600;InbreedingCoeff=0.9607;MQ=72.08;MQ0=1;MQRankSum=-14.419;QD=57.20;ReadPosRankSum=4.763;VQSLOD=3.6278;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,6:7:18.06:447,18,0	0/0:12,0:12:36.11:0,36,1657	0/0:13,0:13:36.11:0,36,1298	0/0:9,0:6:2.30:0,2,164	0/0:34,0:34:99:0,102,4214	1/1:0,15:18:47.81:1157,48,0	0/0:8,0:8:24.08:0,24,1215	0/0:34,0:34:99:0,99,4587	0/0:19,0:19:57.18:0,57,2554	0/0:22,0:22:66.22:0,66,3040	0/0:33,0:33:99:0,99,4456	1/1:0,10:13:36.01:799,36,0	1/1:0,13:17:39.87:876,40,0	1/1:0,12:16:40.42:942,40,0	0/0:19,0:19:57.18:0,57,2382	0/0:20,0:20:60.21:0,60,2795	0/0:13,0:13:36.10:0,36,1663	0/0:10,0:10:30.10:0,30,1221	0/0:14,0:14:42.14:0,42,2105	0/0:13,0:13:39.13:0,39,1945	0/0:6,0:6:18.06:0,18,820	1/1:0,11:11:33.11:843,33,0	1/1:0,7:11:21.54:511,22,0	1/1:1,2:6:11.86:154,12,0	1/1:0,11:16:35.77:848,36,0	0/0:29,0:29:87.29:0,87,3916	0/0:32,0:31:96.31:0,96,4175	0/0:7,0:7:21.07:0,21,1063
chr10	79793819	.	GAATATAA	G	5206.46	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=14.195;DP=420;FS=8.450;HRun=0;HaplotypeScore=139.1862;InbreedingCoeff=0.9228;MQ=68.55;MQ0=1;MQRankSum=-13.682;QD=55.39;ReadPosRankSum=5.894;VQSLOD=4.0204;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:6:18.06:363,18,0	0/0:12,0:12:36.11:0,36,1398	0/0:11,0:11:27.06:0,27,658	0/1:6,0:3:0.76:1,0,37	0/0:26,0:26:78.27:0,78,3091	1/1:1,15:16:42.98:938,43,0	0/0:10,0:10:30.10:0,30,1201	0/0:33,0:33:99:0,99,4015	0/0:18,0:18:54.19:0,54,2111	0/0:23,0:23:69.24:0,69,2591	0/0:33,0:33:96.32:0,96,3739	1/1:0,10:10:30.10:621,30,0	1/1:0,13:13:33.11:683,33,0	1/1:0,12:12:36.12:751,36,0	0/0:20,0:20:60.21:0,60,2386	0/0:21,0:21:63.21:0,63,2467	0/0:12,0:12:36.11:0,36,1411	0/0:8,0:8:21.07:0,21,881	0/0:15,0:15:45.15:0,45,1768	0/0:16,0:16:48.16:0,48,1942	0/0:6,0:6:18.06:0,18,756	1/1:0,11:11:33.11:688,33,0	1/1:0,7:7:21.07:411,21,0	1/1:0,2:2:2.79:63,3,0	1/1:0,11:11:33.11:688,33,0	0/0:27,0:27:81.26:0,81,3150	0/0:28,0:27:84.28:0,84,3251	0/0:7,0:7:21.07:0,21,882
chr10	79793980	.	A	ATTT	5276.80	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-7.330;DP=522;FS=3.207;HRun=8;HaplotypeScore=71.4253;InbreedingCoeff=0.9911;MQ=79.68;MQ0=0;MQRankSum=-1.902;QD=41.22;ReadPosRankSum=0.632;VQSLOD=4.7954;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,15:22:36.08:648,36,0	0/0:10,0:10:24.07:0,24,315	0/0:15,0:15:11.11:0,11,189	0/0:11,0:12:26.17:0,26,341	0/0:23,0:23:63.19:0,63,813	0/0:22,0:22:57.15:0,57,734	0/0:14,0:14:33.08:0,33,433	0/0:32,0:32:63.13:0,63,800	0/0:20,0:20:54.15:0,54,694	0/0:23,0:23:60.18:0,60,788	0/0:22,0:22:57.14:0,57,733	1/1:1,11:14:36.10:689,36,0	1/1:5,12:17:33.08:627,33,0	1/1:6,14:22:48.09:890,48,0	0/0:27,0:27:75.21:0,75,971	0/0:27,0:27:75.21:0,75,986	0/0:13,0:13:36.10:0,36,456	0/0:12,0:12:33.11:0,33,433	0/0:17,0:17:39.07:0,39,486	0/0:20,0:20:51.13:0,51,670	0/0:15,0:15:45.15:0,45,588	1/1:5,14:19:39.13:766,39,0	1/1:1,21:23:66.20:1290,66,0	1/1:2,8:11:19.31:366,19,0	0/0:22,0:22:57.16:0,57,748	0/0:17,0:17:45.14:0,45,591	0/0:22,0:22:57.17:0,57,749	0/0:9,0:9:27.09:0,27,355
chr10	79794698	.	GA	G	1254.62	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.213;DP=570;FS=3.921;HRun=3;HaplotypeScore=94.5893;InbreedingCoeff=0.9960;MQ=59.80;MQ0=0;MQRankSum=2.460;QD=29.87;ReadPosRankSum=1.375;VQSLOD=3.1943;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,99,1415	0/0:13,0:13:39.09:0,39,520	0/0:14,0:12:32.39:0,32,448	0/0:22,0:22:24.46:0,24,699	0/0:22,0:22:66.22:0,66,947	1/1:0,18:18:45.14:558,45,0	0/0:15,0:15:45.15:0,45,647	0/0:29,0:29:81.26:0,81,1135	0/0:23,0:23:69.23:0,69,992	0/0:20,0:20:57.18:0,57,791	0/0:32,0:32:93.29:0,93,1301	0/0:27,0:27:72.24:0,72,1034	0/0:14,0:14:36.12:0,36,510	0/0:16,0:16:45.15:0,45,638	0/0:36,0:36:99:0,108,1538	0/0:14,0:14:42.14:0,42,605	0/0:23,0:23:69.21:0,69,971	0/0:19,0:19:54.18:0,54,777	0/0:13,0:13:39.13:0,39,557	0/0:26,0:26:78.26:0,78,1121	0/0:12,0:12:36.07:0,36,462	0/0:10,0:10:30.10:0,30,431	0/0:23,0:23:66.21:0,66,925	0/0:13,0:13:30.09:0,30,414	1/1:0,24:24:66.21:818,66,0	0/0:19,0:19:54.18:0,54,777	0/0:27,0:27:75.23:0,75,1043	0/0:7,0:7:21.07:0,21,302
chr10	79794708	.	T	TA	4502.54	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=6.328;DP=571;FS=2.098;HRun=9;HaplotypeScore=83.4338;InbreedingCoeff=0.9497;MQ=60.13;MQ0=0;MQRankSum=-6.819;QD=25.44;ReadPosRankSum=2.072;VQSLOD=5.3185;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,29:36:81.22:895,81,0	0/0:11,0:11:32.99:0,33,287	0/0:14,0:10:13.43:0,13,97	0/0:19,0:18:38.96:0,39,331	0/0:26,0:26:71.98:0,72,625	0/0:20,0:20:44.97:0,45,387	0/0:15,0:15:38.98:0,39,339	0/0:32,0:32:86.96:0,87,751	0/0:24,0:24:59.93:0,60,511	0/0:24,0:24:59.96:0,60,519	0/0:31,0:31:83.96:0,84,729	1/1:2,21:23:63.17:696,63,0	1/1:6,7:13:30.50:311,30,0	1/1:10,6:17:1.02:225,1,0	0/0:36,0:36:95.94:0,96,828	0/0:13,1:14:26.02:0,26,300	0/0:19,0:19:56.99:0,57,495	1/1:5,16:21:44.01:525,44,0	0/0:17,0:17:47.97:0,48,413	0/0:27,0:27:71.96:0,72,621	0/0:11,0:11:29.98:0,30,256	1/1:0,10:10:30.08:332,30,0	1/1:4,18:22:8.04:537,8,0	1/1:2,8:10:24.02:252,24,0	0/0:27,0:27:62.96:0,63,547	1/1:1,17:18:45.12:498,45,0	0/0:27,0:27:77.97:0,78,677	1/1:0,7:7:21.06:232,21,0
chr10	79794723	.	G	GA	2765.28	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.460;DP=591;FS=1.403;HRun=8;HaplotypeScore=84.7809;InbreedingCoeff=0.9932;MQ=65.73;MQ0=0;MQRankSum=-10.964;QD=21.77;ReadPosRankSum=-0.042;VQSLOD=3.7835;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,22:33:60.17:686,60,0	0/0:12,0:12:30:0,30,270	0/0:14,0:11:26.20:0,26,220	0/0:22,0:21:59.99:0,60,534	0/0:28,0:28:84.03:0,84,763	0/0:19,0:19:45.02:0,45,412	0/0:14,0:14:42.02:0,42,384	0/0:38,0:38:93.02:0,93,843	0/0:21,0:21:53.97:0,54,482	0/0:26,0:26:72.04:0,72,659	0/0:31,0:31:81.03:0,81,741	1/1:6,18:24:54.15:614,54,0	1/1:3,7:10:24.07:275,24,0	1/1:2,11:13:30.09:346,30,0	0/0:31,0:31:81.04:0,81,741	0/0:14,0:14:39.01:0,39,357	0/0:22,0:22:57.03:0,57,522	0/0:20,0:20:48:0,48,434	0/0:26,0:26:39.99:0,40,546	0/0:26,0:26:72.04:0,72,659	0/0:11,0:11:33.02:0,33,302	1/1:4,11:15:30.09:346,30,0	1/1:6,17:23:51.13:572,51,0	1/1:4,5:9:11.99:124,12,0	0/0:33,0:33:87.05:0,87,796	0/0:18,0:18:45.02:0,45,412	0/0:29,0:29:81.04:0,81,741	0/0:9,0:9:27.01:0,27,247
chr10	79795089	.	GAAA	G	5313.50	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=5.906;DP=644;FS=13.256;HRun=10;HaplotypeScore=114.2222;InbreedingCoeff=0.9954;MQ=70.89;MQ0=1;MQRankSum=-2.617;QD=33.42;ReadPosRankSum=3.465;VQSLOD=2.7900;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:78.24:1059,78,0	0/0:9,0:10:27.07:0,27,521	0/0:7,0:7:18.06:0,18,343	0/0:16,0:17:26.62:0,27,397	0/0:35,0:36:99:0,105,2069	0/0:4,0:24:23.67:0,24,53	0/0:17,0:18:51.15:0,51,955	0/0:30,0:30:66.22:0,66,1313	0/0:19,0:19:48.16:0,48,993	0/0:23,0:23:60.21:0,60,1238	0/0:33,0:33:90.31:0,90,1842	1/1:1,27:28:75.25:1021,75,0	1/1:3,13:16:33.10:450,33,0	1/1:1,15:16:39.12:532,39,0	0/0:31,0:32:78.18:0,78,1537	0/0:28,0:28:78.27:0,78,1604	0/0:19,0:18:42.14:0,42,863	0/0:0,0:16:18.69:0,19,42	0/0:19,0:19:48.16:0,48,996	0/0:30,0:31:84.26:0,84,1649	0/0:27,0:27:72.25:0,72,1472	1/1:1,23:24:66.22:900,66,0	1/1:2,21:23:57.18:777,57,0	1/1:1,18:19:42.14:573,42,0	0/0:1,0:25:28.66:0,29,64	0/0:1,0:24:28.66:0,29,64	0/0:27,0:27:75.26:0,75,1531	0/0:1,0:19:21.18:0,21,48
chr10	79795629	.	C	CCT	2246.55	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.815;DP=459;FS=1.970;HRun=0;HaplotypeScore=109.7385;InbreedingCoeff=0.8809;MQ=76.83;MQ0=18;MQRankSum=-5.401;QD=17.97;ReadPosRankSum=-0.615;VQSLOD=3.4767;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,11:26:37.24:558,37,0	0/0:5,0:5:10.25:0,10,138	0/0:32,0:21:59.82:0,60,820	0/0:36,0:25:62.70:0,63,834	0/0:13,0:13:38.94:0,39,523	0/0:15,0:13:4.77:0,5,72	0/0:19,0:19:47.69:0,48,661	0/0:17,0:17:45.93:0,46,508	0/0:16,0:16:33.04:0,33,451	0/0:16,0:14:30.05:0,30,403	0/0:14,0:14:39.10:0,39,535	1/1:2,18:20:19.55:373,20,0	1/1:2,12:14:21.06:351,21,0	1/1:9,9:17:23.31:398,23,0	0/0:9,0:9:23.57:0,24,328	0/0:14,0:14:39.11:0,39,557	0/0:26,0:26:78.12:0,78,1098	0/0:0,0:13:25.06:0,25,111	0/0:18,0:17:42.10:0,42,615	0/0:7,0:7:11.91:0,12,156	0/0:21,0:19:35.12:0,35,483	1/1:3,10:12:11.71:202,12,0	1/1:1,11:11:2.98:55,3,0	1/1:1,21:22:30.03:498,30,0	0/0:9,0:9:8.89:0,9,59	0/0:2,0:23:55.59:0,56,356	0/0:10,0:10:30.05:0,30,419	0/0:0,0:1:2.88:0,3,15
chr10	79795684	.	G	GCGC	136.22	PASS	AB=0.941;AC=9;AF=0.167;AN=54;BaseQRankSum=5.914;DP=374;FS=2.462;HRun=0;HaplotypeScore=97.5772;InbreedingCoeff=0.6902;MQ=66.11;MQ0=12;MQRankSum=-5.248;QD=2.78;ReadPosRankSum=0.613;VQSLOD=1.9134;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,1:16:10.62:11,0,12	0/0:7,0:7:15.05:0,15,276	0/0:35,0:24:62.78:0,63,1086	0/0:33,0:23:62.93:0,63,1126	0/0:13,0:13:30.07:0,30,496	0/0:15,0:14:21.07:0,21,386	0/0:26,0:26:69.02:0,69,1257	0/0:13,0:12:36.12:0,36,665	0/0:12,0:12:26.63:0,27,434	0/0:19,0:18:41.87:0,42,681	0/0:10,0:10:27.05:0,27,393	1/1:5,2:7:11.60:117,12,0	1/1:7,0:7:7.76:35,8,0	1/1:10,4:14:8.94:100,9,0	0/0:5,0:3:2.49:0,2,30	0/0:11,0:12:33.57:0,34,579	0/0:20,0:18:54.18:0,54,969	0/0:6,0:6:15.05:0,15,273	0/0:12,0:10:30.09:0,30,523	0/0:13,0:13:24.07:0,24,428	0/0:16,0:16:11.72:0,12,158	./.	1/1:5,0:5:2.60:10,3,0	0/0:13,0:14:1.15:0,1,4	0/0:15,0:15:36.12:0,36,657	0/0:11,0:10:30.10:0,30,550	0/0:8,0:8:15.45:0,15,279	0/0:6,0:6:18.06:0,18,332
chr10	79795686	.	C	CCT	266.52	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=5.653;DP=376;FS=0.000;HRun=0;HaplotypeScore=88.8400;InbreedingCoeff=0.7750;MQ=70.16;MQ0=8;MQRankSum=-5.920;QD=3.46;ReadPosRankSum=-0.359;VQSLOD=1.5194;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:1.07:25,0,1	0/0:8,0:8:18.02:0,18,235	0/0:36,0:25:70.89:0,71,875	0/0:35,0:25:63.65:0,64,867	0/0:13,0:13:30.09:0,30,404	0/0:14,0:14:32.98:0,33,401	0/0:25,0:25:63.21:0,63,903	0/0:13,0:13:39.12:0,39,544	0/0:10,0:10:24.08:0,24,333	0/0:17,0:16:42.10:0,42,569	0/0:9,0:9:27.09:0,27,366	1/1:9,0:9:11.97:145,12,0	1/1:9,0:9:11.86:88,12,0	1/1:5,9:16:9.02:132,9,0	0/0:5,0:3:3.01:0,3,40	0/0:11,0:11:30.10:0,30,430	0/0:19,0:18:48.16:0,48,687	0/0:6,0:6:14.94:0,15,187	0/0:14,0:12:30.10:0,30,430	0/0:10,0:10:24.08:0,24,337	0/0:12,0:12:17.64:0,18,175	./.	1/1:7,0:7:2.94:18,3,0	1/1:16,0:19:1.46:5,1,0	0/0:15,0:15:36.12:0,36,516	0/0:10,0:10:30.10:0,30,429	0/0:7,0:7:17.89:0,18,228	0/0:6,0:6:18.06:0,18,258
chr10	79796314	.	A	AAG	6051.72	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.340;DP=573;FS=12.681;HRun=0;HaplotypeScore=79.2333;InbreedingCoeff=0.9931;MQ=83.32;MQ0=0;MQRankSum=-3.207;QD=48.41;ReadPosRankSum=2.126;VQSLOD=5.4061;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,19:25:57.19:1025,57,0	0/0:10,0:10:30.10:0,30,442	0/0:17,0:15:36.07:0,36,474	0/0:24,0:23:60.20:0,60,864	0/0:43,0:43:99:0,129,1825	0/0:29,0:29:84.28:0,84,1237	0/0:16,0:16:48.15:0,48,689	0/0:41,0:41:99:0,114,1644	0/0:10,0:10:21.07:0,21,309	0/0:21,0:21:60.19:0,60,866	0/0:20,0:20:57.19:0,57,839	1/1:2,19:22:60.21:1105,60,0	1/1:0,14:14:42.14:786,42,0	1/1:4,14:18:51.17:934,51,0	0/0:17,0:17:45.15:0,45,663	0/0:23,0:23:66.21:0,66,952	0/0:19,0:19:57.19:0,57,838	0/0:7,0:7:12.04:0,12,177	0/0:21,0:21:63.21:0,63,926	0/0:28,0:28:81.23:0,81,1146	0/0:13,0:13:36.10:0,36,510	1/1:4,13:17:45.15:780,45,0	1/1:0,17:17:45.05:843,45,0	1/1:1,11:12:33.06:580,33,0	0/0:23,0:23:66.22:0,66,954	0/0:27,0:27:81.27:0,81,1175	0/0:31,0:30:93.31:0,93,1368	0/0:8,0:8:24.08:0,24,353
chr10	79796887	.	TAAAG	T	4675.63	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.040;DP=626;FS=0.000;HRun=0;HaplotypeScore=123.9468;InbreedingCoeff=0.9956;MQ=83.00;MQ0=0;MQRankSum=-15.262;QD=35.42;ReadPosRankSum=-1.554;VQSLOD=4.5577;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,29:35:66.13:1063,66,0	0/0:15,0:15:45.15:0,45,1230	0/0:23,0:23:66.23:0,66,1716	0/0:19,0:19:51.10:0,51,1140	0/0:28,0:28:84.27:0,84,2225	0/0:26,0:26:78.25:0,78,2066	0/0:27,0:27:72.20:0,72,1965	0/0:32,0:32:90.31:0,90,2443	0/0:16,0:16:48.16:0,48,1315	0/0:15,0:15:45.15:0,45,1233	0/0:24,0:24:69.23:0,69,1835	1/1:1,11:12:33.11:597,33,0	1/1:0,13:13:39.13:727,39,0	1/1:2,16:18:39.13:691,39,0	0/0:25,0:25:75.26:0,75,2054	0/0:19,0:19:57.20:0,57,1562	0/0:17,0:17:51.18:0,51,1397	0/0:14,0:14:39.09:0,39,995	0/0:24,0:24:69.24:0,69,1851	0/0:38,0:38:99:0,114,3102	0/0:45,0:45:99:0,132,3607	1/1:2,14:16:33.07:523,33,0	1/1:1,24:25:59.82:758,60,0	1/1:2,11:13:18.18:317,18,0	0/0:24,0:24:72.25:0,72,1961	0/0:26,0:26:78.27:0,78,2135	0/0:32,0:32:93.31:0,93,2491	0/0:5,0:5:15.05:0,15,410
chr10	79798113	.	A	ATAT	1754.06	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=4.143;DP=291;FS=5.954;HRun=0;HaplotypeScore=45.0494;InbreedingCoeff=0.8259;MQ=67.26;MQ0=0;MQRankSum=-2.980;QD=44.98;ReadPosRankSum=0.935;VQSLOD=4.8868;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,4:6:12.04:271,12,0	0/0:7,0:7:21.07:0,21,350	0/1:3,0:3:7.65:8,0,20	0/0:3,0:3:6.02:0,6,88	0/0:16,0:16:45.15:0,45,749	0/0:10,0:10:27.09:0,27,450	0/0:5,0:5:15.05:0,15,250	0/0:36,0:36:96.31:0,96,1540	0/0:4,0:4:12.04:0,12,188	0/0:23,0:23:66.21:0,66,1073	0/0:13,0:13:39.13:0,39,637	1/1:3,7:10:21.07:475,21,0	1/1:1,5:6:18.05:364,18,0	1/1:1,4:5:15.05:324,15,0	0/0:8,0:8:24.08:0,24,400	0/0:6,0:6:15.05:0,15,250	0/0:12,0:12:33.09:0,33,522	0/0:11,0:9:20.45:0,20,394	0/0:17,0:17:45.14:0,45,726	0/0:15,0:14:45.13:0,45,687	0/0:8,0:8:24.07:0,24,377	1/1:1,0:1:3.01:40,3,0	1/1:0,5:5:15.05:321,15,0	1/1:0,3:3:6.02:136,6,0	0/0:12,0:12:30.09:0,30,474	0/0:15,0:15:45.15:0,45,727	0/0:19,0:19:57.19:0,57,949	0/0:12,0:11:24.08:0,24,400
chr10	79798163	.	A	AT	3812.54	PASS	AC=22;AF=0.407;AN=54;BaseQRankSum=-3.604;DP=248;FS=3.892;HRun=2;HaplotypeScore=28.2120;InbreedingCoeff=0.8667;MQ=64.57;MQ0=0;MQRankSum=-0.556;QD=41.44;ReadPosRankSum=1.435;VQSLOD=3.0685;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:6:12.04:191,12,0	0/0:3,0:3:9.03:0,9,126	0/0:2,1:2:3:0,3,29	0/0:2,0:2:5.85:0,6,56	0/0:18,0:18:51.17:0,51,713	1/1:0,13:13:39.13:623,39,0	0/0:3,0:3:9.03:0,9,126	0/0:23,0:22:63.20:0,63,852	0/0:5,0:5:15.05:0,15,209	0/0:19,0:19:57.19:0,57,798	0/0:11,0:11:33.10:0,33,444	1/1:0,5:6:15.04:216,15,0	1/1:1,4:5:12.04:192,12,0	1/1:0,4:4:12.04:192,12,0	0/0:5,0:5:15.05:0,15,210	0/0:5,0:5:15.05:0,15,210	0/0:15,0:15:39.13:0,39,544	1/1:0,13:11:36.12:575,36,0	0/0:15,0:15:45.14:0,45,613	0/0:8,0:8:24.08:0,24,335	0/0:10,0:10:24.08:0,24,336	./.	1/1:0,0:1:3:25,3,0	1/1:0,1:1:3.01:48,3,0	1/1:0,14:14:39.13:624,39,0	1/1:0,15:15:45.14:696,45,0	0/0:11,0:11:33.11:0,33,462	1/1:3,11:13:27.09:432,27,0
chr10	79798765	.	TAA	T	3716.94	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=7.709;DP=570;FS=4.825;HRun=9;HaplotypeScore=86.9652;InbreedingCoeff=0.9012;MQ=80.25;MQ0=0;MQRankSum=-1.345;QD=24.14;ReadPosRankSum=2.658;VQSLOD=3.3497;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:57.17:664,57,0	0/0:8,0:8:24.07:0,24,370	0/1:28,0:23:12.57:13,0,467	0/0:21,0:18:24.39:0,24,340	0/0:35,0:35:90.30:0,90,1455	0/0:3,0:23:51.94:0,52,182	0/0:12,0:12:36.12:0,36,591	0/0:30,0:30:78.26:0,78,1256	0/0:20,0:20:51.17:0,51,837	0/0:31,0:31:87.30:0,87,1422	0/0:20,0:21:57.19:0,57,896	1/1:3,15:18:42.12:489,42,0	1/1:3,19:22:54.15:629,54,0	1/1:0,12:12:33.10:385,33,0	0/0:28,0:29:77.75:0,78,1211	0/0:18,0:19:48.16:0,48,771	0/0:23,0:23:54.18:0,54,886	0/0:1,0:12:24.83:0,25,87	0/0:14,0:14:33.10:0,33,515	0/0:33,0:33:90.29:0,90,1449	0/0:4,0:4:9.03:0,9,144	1/1:1,19:20:57.17:664,57,0	1/1:5,15:20:45.11:524,45,0	1/1:1,14:15:30.09:350,30,0	0/0:1,0:24:55.40:0,55,211	0/0:1,0:22:55.71:0,56,238	0/0:27,0:27:81.28:0,81,1326	0/0:0,0:7:17.47:0,17,61
chr10	79799359	.	CT	C	834.48	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.542;DP=533;FS=2.290;HRun=8;HaplotypeScore=52.2554;InbreedingCoeff=0.9780;MQ=75.82;MQ0=0;MQRankSum=-2.171;QD=20.86;ReadPosRankSum=0.999;VQSLOD=3.6421;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.13:0,45,532	0/0:6,0:6:18.06:0,18,217	0/0:11,0:10:24.06:0,24,275	0/0:17,0:17:28.38:0,28,312	0/0:31,0:31:81.24:0,81,969	1/1:3,21:24:54.08:522,54,0	0/0:11,0:11:27.07:0,27,314	0/0:23,0:23:66.20:0,66,797	0/0:19,0:19:57.17:0,57,689	0/0:35,0:35:93.26:0,93,1097	0/0:26,0:26:66.19:0,66,785	0/0:12,0:12:33.10:0,33,399	0/0:20,0:20:51.16:0,51,614	0/0:19,0:20:57.03:0,57,655	0/0:19,0:19:54.16:0,54,642	0/0:16,0:16:45.14:0,45,544	0/0:15,0:15:36.11:0,36,433	0/0:20,0:20:51.16:0,51,615	0/0:23,0:23:54.17:0,54,652	0/0:36,0:36:99:0,99,1177	0/0:19,0:19:48.13:0,48,568	0/0:21,0:21:60.17:0,60,714	0/0:16,0:16:45.13:0,45,534	0/0:4,0:4:12.04:0,12,145	1/1:0,16:16:45.07:435,45,0	0/0:13,0:13:39.10:0,39,458	0/0:33,0:32:87.27:0,87,1050	0/0:11,0:11:33.10:0,33,397
chr10	79799737	.	T	TCTAA	8003.35	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=14.756;DP=523;FS=2.308;HRun=0;HaplotypeScore=103.4286;InbreedingCoeff=0.9330;MQ=75.30;MQ0=0;MQRankSum=-12.522;QD=59.28;ReadPosRankSum=-1.563;VQSLOD=5.6207;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,10:15:36.07:839,36,0	0/0:7,0:7:18.06:0,18,340	0/0:16,0:15:36.04:0,36,578	0/1:10,0:10:2.93:3,0,256	0/0:25,0:25:69.24:0,69,1307	0/0:18,0:18:48.14:0,48,837	0/0:12,0:12:33.10:0,33,578	0/0:29,0:29:72.24:0,72,1328	0/0:9,0:9:27.08:0,27,480	0/0:30,0:30:87.29:0,87,1618	0/0:30,0:30:87.25:0,87,1546	1/1:4,13:17:48.15:1150,48,0	1/1:2,22:24:69.11:1729,69,0	1/1:8,14:25:69.11:1585,69,0	0/0:15,0:15:42.14:0,42,790	0/0:16,0:16:45.14:0,45,813	0/0:30,0:30:87.17:0,87,1596	0/0:17,0:17:42.99:0,43,743	0/0:14,0:14:42.14:0,42,789	0/0:26,0:26:69.24:0,69,1308	0/0:8,0:8:21.05:0,21,366	1/1:1,4:5:15.05:389,15,0	1/1:5,20:25:69.19:1759,69,0	1/1:6,8:14:26.96:549,27,0	0/0:24,0:24:66.23:0,66,1245	0/0:21,0:21:60.21:0,60,1139	0/0:33,0:33:93.32:0,93,1750	0/0:8,0:8:24.08:0,24,432
chr10	79799759	.	TG	T	3630.45	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.778;DP=487;FS=0.000;HRun=1;HaplotypeScore=76.3367;InbreedingCoeff=0.9873;MQ=72.95;MQ0=0;MQRankSum=-11.231;QD=33.93;ReadPosRankSum=0.851;VQSLOD=3.4081;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:33.11:458,33,0	0/0:6,0:6:18.06:0,18,287	0/0:10,0:9:18.97:0,19,309	0/0:10,0:11:27.04:0,27,361	0/0:30,0:30:87.25:0,87,1314	0/0:14,0:14:42.11:0,42,624	0/0:9,0:9:27.08:0,27,408	0/0:31,0:31:93.28:0,93,1382	0/0:10,0:10:30.07:0,30,432	0/0:30,0:29:90.30:0,90,1404	0/0:33,0:33:99:0,99,1577	1/1:0,16:16:35.97:452,36,0	1/1:0,26:26:72.21:979,72,0	1/1:0,20:20:57.06:727,57,0	0/0:14,0:14:42.12:0,42,625	0/0:21,0:21:63.17:0,63,937	0/0:22,0:22:62.77:0,63,972	0/0:10,0:10:24.08:0,24,381	0/0:17,0:17:48.11:0,48,678	0/0:30,0:30:90.28:0,90,1391	0/0:10,0:10:30.07:0,30,432	1/1:0,4:4:11.93:121,12,0	1/1:0,21:21:54.05:685,54,0	1/1:0,8:8:15.05:208,15,0	0/0:19,0:19:57.16:0,57,843	0/0:20,0:20:60.19:0,60,914	0/0:25,0:25:75.24:0,75,1173	0/0:8,0:8:24.08:0,24,383
chr10	79800816	.	CT	C	4315.02	PASS	AB=0.826;AC=21;AF=0.375;AN=56;BaseQRankSum=14.290;DP=605;FS=0.000;HRun=10;HaplotypeScore=83.8540;InbreedingCoeff=0.9202;MQ=60.79;MQ0=1;MQRankSum=1.389;QD=20.16;ReadPosRankSum=2.885;VQSLOD=5.5198;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:31:74.98:648,75,0	0/0:6,0:6:18.05:0,18,197	0/1:15,4:10:46.60:47,0,130	0/0:12,0:9:21.05:0,21,230	0/0:40,2:42:79.21:0,79,1093	0/0:4,0:28:59.66:0,60,298	0/0:15,0:15:33.08:0,33,357	0/0:30,0:30:64.01:0,64,670	0/0:28,0:28:78.20:0,78,854	0/0:22,0:22:51.14:0,51,561	0/0:21,0:21:54.13:0,54,588	1/1:0,15:15:44.99:390,45,0	1/1:1,15:16:35.99:312,36,0	1/1:3,20:23:56.97:494,57,0	0/0:24,0:24:54.15:0,54,597	0/0:27,0:27:81.21:0,81,887	0/0:22,0:22:60.14:0,60,654	1/1:3,19:22:53.98:468,54,0	0/0:17,0:17:39.06:0,39,418	0/0:21,0:21:55.03:0,55,599	0/0:9,0:9:18.05:0,18,199	1/1:4,17:21:50.34:424,50,0	1/1:0,19:19:56.99:495,57,0	1/1:2,16:18:47.99:416,48,0	0/0:37,0:36:78.20:0,78,849	1/1:5,18:23:50.95:438,51,0	0/0:30,0:29:81.20:0,81,883	1/1:0,7:7:21:182,21,0
chr10	79801068	.	CT	C	6034.83	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=17.790;DP=666;FS=5.326;HRun=1;HaplotypeScore=107.2300;InbreedingCoeff=0.9948;MQ=56.86;MQ0=5;MQRankSum=-2.872;QD=32.98;ReadPosRankSum=2.737;VQSLOD=4.5005;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:39:90.30:1258,90,0	0/0:11,0:11:33.11:0,33,528	0/0:18,0:8:24.05:0,24,342	0/0:14,0:10:26.67:0,27,372	0/0:22,0:22:63.21:0,63,989	0/0:17,0:17:51.17:0,51,805	0/0:22,0:22:66.22:0,66,1047	0/0:17,0:17:48.15:0,48,743	0/0:20,0:20:60.20:0,60,958	0/0:25,0:25:75.24:0,75,1176	0/0:13,0:13:39.12:0,39,600	1/1:0,27:27:66.22:921,66,0	1/1:1,35:35:87.29:1215,87,0	1/1:0,28:28:78.26:1090,78,0	0/0:33,0:33:99:0,99,1558	0/0:37,0:37:99:0,111,1751	0/0:37,0:37:99:0,111,1770	0/0:27,0:26:78.27:0,78,1240	0/0:31,0:28:81.24:0,81,1233	0/0:15,0:15:45.07:0,45,663	0/0:46,0:46:99:0,138,2203	1/1:0,9:9:18.06:251,18,0	1/1:0,14:14:27.09:377,27,0	1/1:0,29:29:66.21:923,66,0	0/0:25,0:25:72.23:0,72,1127	0/0:14,0:14:39.13:0,39,621	0/0:33,0:33:99:0,99,1569	0/0:6,0:6:15.05:0,15,240
chr10	79802104	.	CT	C	7280.35	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=17.412;DP=685;FS=5.373;HRun=1;HaplotypeScore=83.5323;InbreedingCoeff=0.9992;MQ=75.69;MQ0=0;MQRankSum=0.284;QD=38.52;ReadPosRankSum=3.949;VQSLOD=5.4967;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:78.26:1090,78,0	0/0:12,0:12:36.12:0,36,573	0/0:23,0:23:69.20:0,69,1054	0/0:20,0:20:50.38:0,50,693	0/0:28,0:28:84.26:0,84,1294	0/0:24,0:24:72.25:0,72,1149	0/0:22,0:22:63.20:0,63,984	0/0:26,0:26:78.27:0,78,1248	0/0:23,0:23:69.24:0,69,1103	0/0:32,0:32:93.32:0,93,1486	0/0:20,0:20:60.20:0,60,957	1/1:0,37:37:99:1425,102,0	1/1:0,26:26:75.25:1048,75,0	1/1:0,19:19:51.17:713,51,0	0/0:31,0:31:93.30:0,93,1462	0/0:28,0:28:84.29:0,84,1341	0/0:26,0:26:75.20:0,75,1123	0/0:14,0:14:39.12:0,39,599	0/0:24,0:24:69.24:0,69,1101	0/0:34,0:34:99:0,102,1631	0/0:25,0:25:75.26:0,75,1199	1/1:0,35:35:96.32:1328,96,0	1/1:0,22:22:63.21:880,63,0	1/1:0,21:21:57.19:797,57,0	0/0:22,0:22:66.19:0,66,999	0/0:30,0:30:84.28:0,84,1321	0/0:24,0:24:72.25:0,72,1146	0/0:7,0:7:21.07:0,21,336
chr10	79802573	.	CCTTT	C	2823.90	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.908;DP=574;FS=33.640;HRun=0;HaplotypeScore=135.9418;InbreedingCoeff=0.9689;MQ=73.02;MQ0=2;MQRankSum=-5.251;QD=22.77;ReadPosRankSum=0.175;VQSLOD=1.6593;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,1:10:6.01:83,6,0	0/0:11,0:11:33.10:0,33,760	0/0:23,0:21:32.21:0,32,952	0/0:30,0:20:38.91:0,39,781	0/0:29,0:29:84.26:0,84,1989	0/0:28,0:28:81.24:0,81,2007	0/0:26,0:26:69.22:0,69,1638	0/0:33,0:33:76.77:0,77,1851	0/0:20,0:20:57.20:0,57,1446	0/0:25,0:25:75.25:0,75,1912	0/0:20,0:20:54.18:0,54,1294	1/1:25,2:27:36.04:846,36,0	1/1:16,5:21:45.18:469,45,0	1/1:14,2:16:41.84:463,42,0	0/0:18,0:18:51.18:0,51,1311	0/0:25,0:25:75.24:0,75,1841	0/0:19,0:19:50.93:0,51,1131	0/0:12,0:12:24.08:0,24,539	0/0:15,0:15:38.91:0,39,880	0/0:23,0:23:66.21:0,66,1612	0/0:13,0:13:39.13:0,39,934	1/1:5,19:24:39.01:486,39,0	1/1:16,5:21:48.11:591,48,0	1/1:4,1:5:8.87:78,9,0	0/0:14,0:14:36.10:0,36,792	0/0:23,0:23:66.22:0,66,1627	0/0:31,0:31:81.26:0,81,2031	0/0:12,0:12:36.09:0,36,879
chr10	79802598	.	TTA	T	291.25	PASS	AB=0.879;AC=11;AF=0.196;AN=56;BaseQRankSum=11.201;DP=585;FS=2.529;HRun=0;HaplotypeScore=143.5922;InbreedingCoeff=0.1153;MQ=67.71;MQ0=10;MQRankSum=-7.721;QD=1.83;ReadPosRankSum=-1.595;VQSLOD=2.4076;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,2:13:3.38:13,0,3	0/0:7,0:7:21.07:0,21,405	0/0:47,0:21:27.95:0,28,345	0/0:61,1:25:15.01:0,15,561	0/0:24,0:24:66.11:0,66,1048	0/0:28,0:28:1.81:0,2,207	0/0:20,0:20:57.14:0,57,951	0/0:26,0:25:67.42:0,67,1055	0/0:18,0:18:54.18:0,54,1012	0/0:21,0:21:58.05:0,58,978	0/0:26,0:26:52.45:0,52,1050	0/1:23,1:24:0.85:1,0,181	0/1:15,2:18:8.49:8,0,168	0/1:13,3:16:2.85:22,0,3	0/0:16,0:16:46.33:0,46,708	0/0:23,0:23:69.20:0,69,1200	0/0:16,0:16:45.15:0,45,860	0/1:12,0:12:20.52:21,0,57	0/0:14,0:13:38.45:0,38,607	0/0:22,0:22:66.13:0,66,1142	0/0:12,0:12:33.07:0,33,534	0/1:16,1:18:27.45:27,0,51	0/1:9,2:13:11.46:26,0,11	0/1:6,1:8:16.97:17,0,31	0/0:12,0:12:36.06:0,36,532	0/1:26,0:26:87.54:159,0,88	0/0:32,0:31:93.16:0,93,1494	1/1:9,0:9:23.75:143,24,0
chr10	79802600	.	ATC	A	1138.10	PASS	AB=0.958;AC=14;AF=0.250;AN=56;BaseQRankSum=8.476;DP=603;FS=4.858;HRun=0;HaplotypeScore=143.1612;InbreedingCoeff=0.2970;MQ=66.60;MQ0=14;MQRankSum=-6.632;QD=5.42;ReadPosRankSum=3.940;VQSLOD=3.0287;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:4.25:0,4,17	0/0:7,0:7:21.07:0,21,344	0/1:50,0:22:8.51:9,0,253	0/0:68,0:26:18.12:0,18,461	0/0:22,0:22:51.17:0,51,823	0/1:28,0:28:5.83:342,0,6	0/0:19,0:19:48.16:0,48,768	0/0:26,0:25:48.16:0,48,803	0/0:19,0:19:57.19:0,57,935	0/0:21,0:21:54.18:0,54,878	0/0:25,0:25:68.97:0,69,991	0/1:27,0:27:8.62:9,0,71	0/0:18,0:18:6.16:0,6,70	1/1:16,0:16:2.69:13,3,0	0/0:15,0:15:35.95:0,36,558	0/0:24,0:24:63.19:0,63,1003	0/0:17,0:17:45.15:0,45,746	0/1:12,0:12:30.54:62,0,31	0/0:14,0:13:36.12:0,36,581	0/0:23,0:23:63.20:0,63,994	0/0:14,0:14:33.08:0,33,479	0/1:19,0:18:12.98:13,0,22	1/1:13,0:13:5.59:26,6,0	1/1:9,0:9:2.49:13,2,0	0/0:13,0:13:35.52:0,36,440	0/1:18,9:27:38.81:556,0,39	0/0:32,0:31:83.69:0,84,1268	1/1:2,7:9:5.88:248,6,0
chr10	79802612	.	CTTTA	C	1827.41	PASS	AB=0.961;AC=18;AF=0.321;AN=56;BaseQRankSum=11.231;DP=633;FS=3.289;HRun=0;HaplotypeScore=163.6023;InbreedingCoeff=0.6151;MQ=64.17;MQ0=20;MQRankSum=-8.735;QD=9.32;ReadPosRankSum=-2.810;VQSLOD=2.6261;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,11:16:10.29:96,10,0	0/0:9,0:9:27.07:0,27,607	0/0:61,0:20:13.12:0,13,405	0/0:81,0:26:4.69:0,5,533	0/0:21,0:21:60.10:0,60,1311	1/1:21,0:35:50.12:584,50,0	0/0:19,0:19:51.16:0,51,1144	0/0:26,0:25:69.24:0,69,1516	0/0:20,0:20:56.73:0,57,1408	0/0:21,0:20:60.21:0,60,1427	0/0:28,0:28:81.05:0,81,1817	0/1:22,5:27:72.74:180,0,73	1/1:18,3:21:14.01:386,14,0	1/1:8,5:13:11.81:147,12,0	0/0:14,0:14:42.13:0,42,986	0/0:23,0:23:50.22:0,50,1541	0/0:23,0:23:63.13:0,63,1249	0/1:10,0:10:8.56:40,0,9	0/0:15,0:14:38.42:0,38,905	0/0:21,0:21:63.17:0,63,1522	0/0:12,0:12:36.11:0,36,808	1/1:12,1:12:11.68:134,12,0	1/1:9,2:11:5.32:86,5,0	1/1:9,2:11:14.79:152,15,0	0/0:13,0:13:26.97:0,27,257	0/1:28,0:28:99:153,0,301	0/0:30,0:29:65.28:0,65,1751	0/1:10,0:10:62.94:63,0,74
chr10	79802640	.	C	CTTTA	1405.29	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=7.046;DP=583;FS=1.308;HRun=0;HaplotypeScore=161.1138;InbreedingCoeff=0.2584;MQ=62.14;MQ0=12;MQRankSum=-8.014;QD=13.26;ReadPosRankSum=1.754;VQSLOD=3.3959;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:11.05:0,11,73	0/0:10,0:10:30.10:0,30,566	0/0:37,0:18:30.68:0,31,407	0/0:57,0:23:12.26:0,12,594	0/0:20,0:20:51.16:0,51,945	1/1:23,9:32:66.10:1330,66,0	0/0:24,0:24:66.02:0,66,1114	0/0:30,0:30:84.27:0,84,1530	0/0:21,0:21:54.19:0,54,1047	0/0:20,0:19:57.20:0,57,1101	0/0:30,0:30:81.14:0,81,1536	0/1:21,0:21:32.72:33,0,317	0/1:22,0:22:87.43:87,0,359	0/1:15,0:15:76.13:76,0,219	0/0:13,0:13:39.13:0,39,779	0/0:20,0:20:60.18:0,60,1127	0/0:17,0:16:45.15:0,45,825	0/0:12,0:12:17.69:0,18,172	0/0:13,0:12:36.11:0,36,636	0/0:24,0:23:63.20:0,63,1201	0/0:13,0:13:39.13:0,39,758	0/0:14,0:13:22.47:0,22,252	0/0:11,0:11:19.34:0,19,197	0/1:16,0:16:5.06:5,0,292	0/0:14,0:14:36.12:0,36,649	0/0:30,0:30:63.17:0,63,878	0/0:23,0:22:66.19:0,66,1183	0/0:7,0:7:20.94:0,21,239
chr10	79802709	.	C	CCTT	5360.74	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-2.863;DP=608;FS=0.439;HRun=0;HaplotypeScore=100.9912;InbreedingCoeff=0.9926;MQ=87.26;MQ0=0;MQRankSum=-3.227;QD=57.03;ReadPosRankSum=3.823;VQSLOD=6.6620;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.15:0,45,754	0/0:15,0:15:42.14:0,42,689	0/0:23,0:23:63.14:0,63,912	0/0:23,0:23:63.01:0,63,909	0/0:28,0:28:81.28:0,81,1373	1/1:1,25:26:66.23:1491,66,0	0/0:19,0:19:51.13:0,51,786	0/0:27,0:27:75.25:0,75,1248	0/0:25,0:25:75.22:0,75,1218	0/0:31,0:31:84.27:0,84,1382	0/0:22,0:22:63.20:0,63,1044	0/0:28,0:28:78.17:0,78,1240	0/0:22,0:22:63.15:0,63,1003	0/0:25,0:25:72.18:0,72,1141	0/0:19,0:19:57.17:0,57,920	0/0:15,0:15:45.15:0,45,767	0/0:13,0:13:36.11:0,36,586	1/1:0,16:16:33.11:759,33,0	0/0:13,0:13:33.11:0,33,563	0/0:29,0:29:84:0,84,1334	0/0:24,0:24:72.25:0,72,1223	0/0:16,0:16:45.05:0,45,704	0/0:19,0:19:57.19:0,57,964	0/0:33,0:32:80.69:0,81,1244	1/1:0,20:22:57.20:1314,57,0	1/1:1,22:25:72.17:1521,72,0	0/0:28,0:28:81.26:0,81,1344	1/1:0,4:4:12.04:277,12,0
chr10	79803107	.	GTGTT	G	947.33	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.696;DP=646;FS=0.000;HRun=0;HaplotypeScore=137.5614;InbreedingCoeff=0.9985;MQ=85.29;MQ0=0;MQRankSum=-2.950;QD=43.06;ReadPosRankSum=-0.086;VQSLOD=4.0221;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,3750	0/0:11,0:11:27.09:0,27,722	0/0:28,0:28:75.24:0,75,1905	0/0:12,0:13:36.08:0,36,871	0/0:21,0:21:50.50:0,51,1380	1/1:3,18:22:54.19:1042,54,0	0/0:19,0:19:54.19:0,54,1453	0/0:33,0:33:78.27:0,78,2138	0/0:20,0:20:60.21:0,60,1631	0/0:19,0:19:42.14:0,42,1151	0/0:18,0:18:45.13:0,45,1194	0/0:30,0:30:90.31:0,90,2466	0/0:22,0:22:63.20:0,63,1666	0/0:24,0:24:72.25:0,72,1926	0/0:32,0:32:96.33:0,96,2577	0/0:26,0:26:78.27:0,78,2133	0/0:25,0:25:75.21:0,75,1970	0/0:13,0:13:36.01:0,36,984	0/0:14,0:14:42.12:0,42,1078	0/0:16,0:16:39.13:0,39,1069	0/0:25,0:25:69.24:0,69,1871	0/0:28,0:28:81.28:0,81,2214	0/0:24,0:24:72.25:0,72,1924	0/0:31,0:31:90.31:0,90,2412	0/0:24,0:24:69.24:0,69,1887	0/0:17,0:17:45.15:0,45,1209	0/0:31,0:31:87.30:0,87,2361	0/0:14,0:14:39.13:0,39,1067
chr10	79803486	.	ACT	A	3118.83	PASS	AB=0.545;AC=7;AF=0.125;AN=56;BaseQRankSum=4.460;DP=711;FS=0.444;HRun=0;HaplotypeScore=109.6751;InbreedingCoeff=0.8310;MQ=87.68;MQ0=0;MQRankSum=-2.309;QD=36.69;ReadPosRankSum=3.639;VQSLOD=5.9427;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:99:1458,99,0	0/0:10,0:10:30.09:0,30,530	0/0:30,0:30:84.29:0,84,1554	0/0:22,0:22:54.13:0,54,902	0/0:34,0:34:99:0,102,1898	0/0:25,0:25:63.22:0,63,1172	0/0:21,0:21:63.20:0,63,1141	0/0:28,0:28:81.28:0,81,1484	0/0:30,0:30:87.28:0,87,1598	0/0:35,0:35:99:0,102,1875	0/0:20,0:20:51.17:0,51,929	0/0:21,0:21:60.19:0,60,1093	0/0:24,0:24:72.21:0,72,1267	0/0:30,0:30:87.30:0,87,1629	0/0:28,0:28:84.29:0,84,1566	0/0:25,0:25:75.24:0,75,1374	0/0:17,0:17:51.17:0,51,955	1/1:0,19:19:54.18:793,54,0	0/0:24,0:24:69.24:0,69,1282	0/0:35,0:35:99:0,99,1791	0/0:32,0:32:93.30:0,93,1682	0/0:29,0:29:81.28:0,81,1510	0/0:23,0:23:60.21:0,60,1111	0/0:28,0:28:84.24:0,84,1519	0/0:25,0:25:75.26:0,75,1405	0/1:4,20:24:99:794,0,99	0/0:30,0:30:90.31:0,90,1675	1/1:0,5:5:15.05:221,15,0
chr10	79803715	.	GATC	G	1267.42	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.120;DP=678;FS=4.742;HRun=0;HaplotypeScore=125.4162;InbreedingCoeff=0.9450;MQ=75.28;MQ0=0;MQRankSum=-3.801;QD=33.35;ReadPosRankSum=1.981;VQSLOD=4.0062;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:38:84.13:1362,84,0	0/0:11,0:11:33.11:0,33,760	0/0:19,0:19:54.11:0,54,1025	0/0:19,0:18:54.18:0,54,1195	0/0:33,0:33:96.31:0,96,2130	0/0:19,0:19:57.20:0,57,1314	0/0:24,0:24:69.22:0,69,1543	0/0:34,0:34:99:0,99,2223	0/0:22,0:22:57.18:0,57,1267	0/0:23,0:23:69.24:0,69,1532	0/0:21,0:21:60.16:0,60,1253	0/0:24,0:24:69.20:0,69,1150	0/0:25,0:25:72.23:0,72,1197	0/0:27,0:27:75.26:0,75,1264	0/0:27,0:27:75.24:0,75,1682	0/0:31,0:31:87.27:0,87,1896	0/0:17,0:17:51.18:0,51,1175	0/0:15,0:15:42.14:0,42,967	0/0:22,0:22:66.20:0,66,1370	0/0:31,0:31:93.31:0,93,2009	0/0:28,0:28:84.29:0,84,1931	0/0:31,0:31:87.30:0,87,1483	0/0:24,0:24:72.25:0,72,1233	0/0:34,0:34:99:0,99,1643	0/0:21,0:21:57.18:0,57,1248	0/0:23,0:23:66.22:0,66,1422	0/0:32,0:32:96.33:0,96,2211	0/0:3,0:3:9.03:0,9,207
chr10	79803869	.	TGGCC	T	4037.15	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.264;DP=633;FS=9.438;HRun=0;HaplotypeScore=136.7982;InbreedingCoeff=0.9986;MQ=73.74;MQ0=0;MQRankSum=-14.540;QD=41.62;ReadPosRankSum=3.275;VQSLOD=4.0353;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,3627	0/0:9,0:9:27.09:0,27,783	0/0:9,0:9:27.09:0,27,679	0/0:19,0:19:42.33:0,42,900	0/0:18,0:18:54.17:0,54,1464	0/0:25,0:25:72.25:0,72,2053	0/0:28,0:28:84.29:0,84,2366	0/0:28,0:28:84.29:0,84,2376	0/0:23,0:23:69.24:0,69,1909	0/0:16,0:16:48.16:0,48,1384	0/0:13,0:13:39.13:0,39,1117	1/1:1,16:17:48.15:697,48,0	1/1:0,16:16:48.16:714,48,0	1/1:1,12:13:39.12:562,39,0	0/0:33,0:33:99:0,99,2780	0/0:34,0:34:99:0,102,2879	0/0:26,0:26:78.27:0,78,2243	0/0:11,0:11:33.11:0,33,939	0/0:30,0:30:87.30:0,87,2491	0/0:29,0:29:87.30:0,87,2517	0/0:43,0:43:99:0,126,3501	1/1:0,16:16:42.14:620,42,0	1/1:1,23:24:69.19:1002,69,0	1/1:0,11:11:30.10:443,30,0	0/0:26,0:26:78.25:0,78,2196	0/0:31,0:31:93.32:0,93,2588	0/0:32,0:32:96.33:0,96,2746	0/0:7,0:7:21.07:0,21,609
chr10	79803874	.	TCGGCA	T	4715.74	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.475;DP=636;FS=11.238;HRun=0;HaplotypeScore=149.7230;InbreedingCoeff=0.9969;MQ=73.74;MQ0=0;MQRankSum=-14.104;QD=47.16;ReadPosRankSum=3.076;VQSLOD=4.6585;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,3793	0/0:9,0:9:27.09:0,27,899	0/0:12,0:12:30.01:0,30,588	0/0:15,0:15:17.53:0,18,825	0/0:16,0:16:48.16:0,48,1556	0/0:26,0:26:78.25:0,78,2340	0/0:26,0:26:78.27:0,78,2550	0/0:28,0:28:81.28:0,81,2627	0/0:21,0:21:63.22:0,63,2097	0/0:19,0:19:57.20:0,57,1837	0/0:15,0:15:45.14:0,45,1380	1/1:0,16:16:45.15:776,45,0	1/1:2,16:18:53.39:866,53,0	1/1:1,12:13:39.13:675,39,0	0/0:33,0:33:99:0,99,3236	0/0:33,0:33:99:0,99,3222	0/0:27,0:27:81.28:0,81,2610	0/0:12,0:12:33.11:0,33,1045	0/0:28,0:28:84.28:0,84,2683	0/0:32,0:32:96.33:0,96,3080	0/0:43,0:43:99:0,123,4013	1/1:0,16:16:42.14:718,42,0	1/1:0,23:23:66.23:1136,66,0	1/1:3,11:14:37.33:545,37,0	0/0:25,0:25:75.26:0,75,2405	0/0:31,0:31:93.32:0,93,3037	0/0:34,0:34:99:0,102,3178	0/0:7,0:7:21.07:0,21,699
chr10	79805408	.	AGT	A	158.52	PASS	AB=0.987;AC=12;AF=0.273;AN=44;BaseQRankSum=4.398;DP=560;FS=0.000;HRun=0;HaplotypeScore=83.2742;InbreedingCoeff=0.1630;MQ=46.73;MQ0=53;MQRankSum=0.402;QD=0.83;ReadPosRankSum=-0.894;VQSLOD=1.4334;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:22:0.86:2,1,0	./.	0/0:19,0:4:0:0,0,0	0/0:31,0:12:0:0,0,0	0/0:18,1:18:16.42:0,16,155	0/0:25,0:22:3.74:0,4,12	0/0:38,4:36:43.66:0,44,520	0/1:21,2:17:46.53:47,0,89	0/1:30,0:28:25.70:26,0,240	0/0:16,0:13:21.16:0,21,248	0/0:9,0:9:6.02:0,6,90	./.	./.	./.	0/1:19,0:16:1.48:1,0,78	1/1:8,15:22:4.31:63,4,0	0/0:35,0:30:38.26:0,38,441	1/1:20,0:19:7.67:60,8,0	0/0:12,0:8:7.93:0,8,59	0/0:14,0:12:2.92:0,3,17	0/0:67,0:58:32.51:0,33,461	./.	./.	0/0:16,0:13:0:0,0,0	0/1:9,0:8:8.73:9,0,12	0/1:27,0:24:31.87:32,0,39	0/0:15,0:14:20.93:0,21,213	0/1:13,0:10:11.28:40,0,11
chr10	79805434	.	TGA	T	1480.78	PASS	AB=0.959;AC=29;AF=0.537;AN=54;BaseQRankSum=6.189;DP=487;FS=2.310;HRun=0;HaplotypeScore=66.9690;InbreedingCoeff=0.1787;MQ=43.65;MQ0=54;MQRankSum=3.020;QD=4.22;ReadPosRankSum=-1.519;VQSLOD=2.2318;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:20:15.45:125,15,0	0/0:3,0:2:3:0,3,25	0/0:8,0:1:2.92:0,3,17	0/0:11,0:1:2.94:0,3,18	0/0:18,0:17:1.65:0,2,171	1/1:23,0:20:8.69:60,9,0	0/0:39,0:32:11.70:0,12,343	0/1:25,0:15:23.32:23,0,123	0/1:25,0:23:92.10:92,0,174	0/1:11,0:9:4.76:5,0,95	0/0:9,0:8:2.10:0,2,105	1/1:12,0:10:20.60:153,21,0	1/1:10,0:6:11.93:92,12,0	1/1:10,0:10:14.75:107,15,0	0/0:15,0:13:16.74:0,17,88	0/1:21,0:20:27.04:38,0,27	0/0:29,0:24:23.29:0,23,495	1/1:3,17:18:4.97:170,5,0	0/1:15,0:12:16.57:17,0,95	0/1:13,0:11:0.48:0,0,23	0/1:65,0:55:96.92:97,0,388	1/1:4,0:3:8.99:75,9,0	./.	1/1:13,0:9:8.33:73,8,0	1/1:7,1:8:11.79:83,12,0	0/1:11,16:24:38.28:317,0,38	0/1:16,0:16:17.64:18,0,149	1/1:5,2:5:8.96:107,9,0
chr10	79805436	.	AGT	A	232.03	PASS	AB=0.980;AC=18;AF=0.346;AN=52;BaseQRankSum=4.149;DP=506;FS=5.919;HRun=0;HaplotypeScore=73.3217;InbreedingCoeff=-0.0029;MQ=43.85;MQ0=54;MQRankSum=-0.414;QD=0.70;ReadPosRankSum=1.168;VQSLOD=0.9406;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:21:0.30:0,0,0	0/0:3,0:2:3.01:0,3,44	0/0:10,0:1:3.01:0,3,34	0/0:15,0:2:6.01:0,6,63	0/0:16,0:17:15.05:0,15,207	0/1:26,0:23:0.86:1,0,35	0/1:40,0:34:46.55:47,0,258	0/1:25,0:15:18.78:19,0,117	0/0:23,0:23:15.77:0,16,127	0/0:10,0:9:4.26:0,4,11	0/1:11,0:10:14.53:15,0,160	0/0:14,0:12:0.94:0,1,2	0/1:11,0:7:5.56:6,0,15	0/0:10,0:10:0.69:0,1,2	0/0:14,0:12:12.04:0,12,157	0/0:22,0:21:9.86:0,10,91	0/1:30,0:25:29.48:29,0,506	1/1:20,0:18:8.93:65,9,0	0/1:15,0:13:21.51:22,0,77	0/1:12,0:10:27.52:28,0,38	0/1:65,0:55:1.81:2,0,419	./.	./.	0/0:14,0:10:3.31:0,3,25	0/0:8,0:8:0.92:0,1,2	1/1:27,0:24:7.53:50,8,0	0/1:12,4:16:39.25:39,0,116	1/1:7,0:5:5.99:48,6,0
chr10	79805766	.	CTCTGGTTAGTGTGGT	C	187.91	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.913;DP=403;FS=0.000;HRun=0;HaplotypeScore=158.4000;InbreedingCoeff=0.6901;MQ=88.81;MQ0=2;MQRankSum=-0.976;QD=37.58;ReadPosRankSum=-1.855;VQSLOD=2.8519;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:30.10:0,30,2244	0/0:6,0:6:18.06:0,18,1351	0/0:23,0:22:66.17:0,66,4047	0/0:12,0:12:28.27:0,28,1990	0/0:19,0:19:54.19:0,54,3922	1/1:0,5:5:6.02:268,6,0	0/0:15,0:15:45.14:0,45,3052	0/0:41,0:41:99:0,111,7509	0/0:18,0:18:54.17:0,54,3475	0/0:17,0:17:51.18:0,51,3784	0/0:15,0:15:42.14:0,42,2594	0/0:6,0:6:18.06:0,18,1304	0/0:7,0:7:21.07:0,21,1572	0/0:9,0:9:27.09:0,27,1838	0/0:10,0:10:30.10:0,30,2237	0/0:19,0:19:54.19:0,54,4047	0/0:27,0:27:81.28:0,81,5360	0/0:6,0:6:18.06:0,18,1190	0/0:16,0:16:45.15:0,45,2725	0/0:25,0:25:66.21:0,66,4365	0/0:30,0:30:84.29:0,84,6297	0/0:5,0:5:14.79:0,15,686	0/0:3,0:3:9.03:0,9,337	0/0:4,0:4:12.04:0,12,901	0/0:17,0:15:38.87:0,39,2376	0/0:6,0:6:18.06:0,18,1338	0/0:29,0:29:84.29:0,84,6105	0/0:3,0:3:6.02:0,6,450
chr10	79806089	.	AT	A	2600.43	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.023;DP=609;FS=1.847;HRun=8;HaplotypeScore=97.9842;InbreedingCoeff=0.9715;MQ=79.90;MQ0=0;MQRankSum=-12.498;QD=22.42;ReadPosRankSum=0.077;VQSLOD=3.5702;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.12:0,48,557	0/0:14,0:14:39.12:0,39,471	0/0:20,0:20:38.60:0,39,419	0/0:13,0:13:7.46:0,7,327	0/0:31,0:31:90.28:0,90,1087	0/0:26,0:26:75.23:0,75,906	0/0:15,0:15:39.11:0,39,460	0/0:36,0:36:99:0,102,1203	0/0:24,0:24:60.18:0,60,725	0/0:25,0:25:60.16:0,60,702	0/0:30,0:30:87.27:0,87,1051	1/1:2,15:18:44.09:411,44,0	1/1:2,19:21:54.08:521,54,0	1/1:3,19:21:57.09:550,57,0	0/0:20,0:20:60.05:0,60,703	0/0:19,0:19:57.17:0,57,689	0/0:15,0:15:45.11:0,45,520	0/0:11,0:12:29.92:0,30,341	0/0:21,0:21:51.13:0,51,591	0/0:49,0:49:99:0,123,1458	0/0:15,0:15:33.10:0,33,399	1/1:1,25:26:69.11:666,69,0	1/1:1,21:22:57.09:550,57,0	1/1:2,5:7:9.01:87,9,0	0/0:19,0:19:54.17:0,54,652	0/0:26,0:26:72.22:0,72,870	0/0:38,0:38:99:0,111,1329	0/0:8,0:8:24.07:0,24,290
chr10	79806113	.	TC	T	4245.90	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.847;DP=598;FS=0.397;HRun=1;HaplotypeScore=99.5529;InbreedingCoeff=0.9971;MQ=87.49;MQ0=0;MQRankSum=-15.245;QD=36.92;ReadPosRankSum=0.668;VQSLOD=4.8310;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.03:0,48,707	0/0:16,0:16:48.14:0,48,721	0/0:28,0:28:78.26:0,78,1211	0/0:18,0:18:54.11:0,54,804	0/0:25,0:25:75.22:0,75,1126	0/0:21,0:21:63.21:0,63,1002	0/0:18,0:18:54.17:0,54,839	0/0:42,0:42:99:0,126,1888	0/0:21,0:21:63.20:0,63,983	0/0:24,0:24:69.23:0,69,1083	0/0:26,0:26:78.25:0,78,1222	1/1:1,16:17:51.09:653,51,0	1/1:0,24:24:69.23:962,69,0	1/1:0,21:20:60.17:815,60,0	0/0:23,0:23:69.22:0,69,1077	0/0:25,0:25:75.26:0,75,1194	0/0:15,0:15:45.15:0,45,719	0/0:7,0:7:21.03:0,21,307	0/0:16,0:16:45.13:0,45,689	0/0:39,0:39:99:0,117,1772	0/0:13,0:13:33.09:0,33,501	1/1:1,16:17:48.16:668,48,0	1/1:0,25:25:66.18:898,66,0	1/1:0,11:11:18.06:251,18,0	0/0:17,0:17:51.09:0,51,761	0/0:27,0:27:81.28:0,81,1293	0/0:37,0:37:99:0,111,1718	0/0:8,0:8:24.05:0,24,356
chr10	79806136	.	C	CT	4134.64	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.206;DP=586;FS=0.000;HRun=0;HaplotypeScore=95.0593;InbreedingCoeff=0.9931;MQ=88.85;MQ0=0;MQRankSum=-14.537;QD=37.93;ReadPosRankSum=3.660;VQSLOD=3.7627;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.13:0,51,688	0/0:16,0:16:48.15:0,48,656	0/0:27,0:27:78.25:0,78,1075	0/0:19,0:20:57.16:0,57,774	0/0:25,0:25:75.19:0,75,965	0/0:24,0:24:72.20:0,72,969	0/0:23,0:23:69.21:0,69,943	0/0:32,0:32:96.32:0,96,1343	0/0:25,0:25:75.24:0,75,1029	0/0:25,0:25:75.24:0,75,1021	0/0:23,0:23:69.22:0,69,948	1/1:0,16:16:45.15:668,45,0	1/1:0,18:18:54.18:809,54,0	1/1:0,24:23:60.20:900,60,0	0/0:24,0:24:69.21:0,69,935	0/0:27,0:27:81.25:0,81,1101	0/0:19,0:19:57.18:0,57,780	0/0:5,0:5:15.05:0,15,210	0/0:11,0:11:33.11:0,33,462	0/0:37,0:37:99:0,108,1505	0/0:15,0:15:42.12:0,42,569	1/1:0,21:21:54.18:809,54,0	1/1:0,22:22:51.17:752,51,0	1/1:0,8:8:15.01:197,15,0	0/0:16,0:16:48.12:0,48,635	0/0:21,0:21:63.21:0,63,880	0/0:36,0:36:99:0,108,1485	0/0:8,0:8:24.08:0,24,335
chr10	79806544	.	C	CT	6756.88	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-14.268;DP=759;FS=1.876;HRun=2;HaplotypeScore=80.0154;InbreedingCoeff=0.9983;MQ=81.97;MQ0=0;MQRankSum=-2.839;QD=35.19;ReadPosRankSum=2.898;VQSLOD=5.4588;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.20:0,63,780	0/0:13,0:13:36.11:0,36,446	0/0:27,0:27:81.25:0,81,989	0/0:30,0:30:74.73:0,75,890	0/0:30,0:30:87.26:0,87,1066	0/0:32,0:32:90.28:0,90,1115	0/0:19,0:19:39.12:0,39,483	0/0:31,0:31:83.05:0,83,978	0/0:32,0:32:96.27:0,96,1163	0/0:36,0:36:99:0,102,1265	0/0:21,0:21:57.18:0,57,702	1/1:2,16:18:42.11:583,42,0	1/1:1,36:37:90.30:1295,90,0	1/1:3,28:31:84.28:1209,84,0	0/0:33,0:33:90.27:0,90,1105	0/0:20,0:20:60.17:0,60,720	0/0:32,0:32:90.28:0,90,1115	0/0:16,0:16:42.13:0,42,521	0/0:23,0:23:66.20:0,66,806	0/0:36,0:36:99:0,105,1275	0/0:22,0:22:63.20:0,63,781	1/1:1,36:37:96.32:1382,96,0	1/1:2,28:30:63.13:907,63,0	1/1:2,37:39:96.32:1382,96,0	0/0:19,0:19:51.16:0,51,632	0/0:32,0:32:87.26:0,87,1058	0/0:34,0:34:99:0,99,1226	0/0:6,0:6:18.06:0,18,223
chr10	79807277	.	CGTGTGTGT	C	497.84	PASS	AB=0.855;AC=2;AF=0.037;AN=54;BaseQRankSum=3.143;DP=709;FS=3.100;HRun=0;HaplotypeScore=202.4714;InbreedingCoeff=0.2666;MQ=66.32;MQ0=8;MQRankSum=-5.008;QD=7.32;ReadPosRankSum=-1.637;VQSLOD=2.6702;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,25:66:4.69:572,0,5	0/0:13,0:13:11.42:0,11,368	0/0:37,0:23:2.96:0,3,19	./.	0/0:13,0:13:21.07:0,21,771	0/0:17,0:16:1.52:0,2,98	0/0:18,0:23:36.05:0,36,763	0/0:28,0:28:35.95:0,36,429	0/0:20,0:22:33.09:0,33,970	0/0:26,0:27:57.18:0,57,1579	0/0:10,0:9:18.02:0,18,324	0/0:26,0:25:27.02:0,27,453	0/0:15,0:15:15.04:0,15,371	0/0:29,0:28:24.30:0,24,485	0/0:23,0:26:57.57:0,58,1508	0/0:22,0:24:51.16:0,51,1783	0/0:37,0:45:84.21:0,84,2294	0/0:18,0:19:39.51:0,40,877	0/0:22,0:23:3.99:0,4,607	0/0:23,0:26:42.12:0,42,1315	0/0:48,0:48:59.63:0,60,1950	0/0:18,0:17:8.78:0,9,99	0/0:25,0:23:7.39:0,7,251	0/0:28,0:28:18.03:0,18,398	0/0:12,0:22:13.27:0,13,279	0/0:26,0:26:48.14:0,48,973	0/0:19,0:20:38.33:0,38,1220	0/1:2,0:2:0:0,0,0
chr10	79807637	.	AG	A	1504.13	PASS	AB=0.545;AC=11;AF=0.196;AN=56;BaseQRankSum=15.201;DP=647;FS=2.950;HRun=1;HaplotypeScore=111.3782;InbreedingCoeff=0.8634;MQ=74.66;MQ0=4;MQRankSum=-14.581;QD=13.08;ReadPosRankSum=1.386;VQSLOD=2.7556;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1725	0/0:11,0:11:33.10:0,33,504	0/0:36,0:25:71.25:0,71,1056	0/0:33,0:25:56.08:0,56,915	0/0:23,0:23:69.19:0,69,1050	0/0:27,0:27:81.28:0,81,1295	0/0:23,0:23:69.22:0,69,1078	0/0:30,0:30:90.28:0,90,1376	0/0:26,0:26:78.25:0,78,1224	0/0:41,0:41:99:0,123,1942	0/0:8,0:8:24.08:0,24,384	1/1:1,23:24:66.34:389,66,0	1/1:6,26:32:80.43:471,80,0	1/1:1,29:30:87.66:544,88,0	0/0:15,0:15:45.15:0,45,720	0/0:28,0:28:84.29:0,84,1340	0/0:41,0:41:99:0,120,1891	0/0:8,0:8:18.02:0,18,260	0/0:18,0:18:54.15:0,54,802	0/0:24,0:24:72.25:0,72,1151	0/0:21,0:21:63.18:0,63,960	1/1:0,4:6:11.69:72,12,0	1/1:1,10:10:17.44:100,17,0	0/1:2,10:12:27.29:104,0,27	0/0:25,0:25:75.26:0,75,1199	0/0:19,0:19:57.19:0,57,911	0/0:35,0:35:99:0,105,1647	0/0:3,0:3:8.97:0,9,91
chr10	79807640	.	CA	C	1752.38	PASS	AB=0.583;AC=11;AF=0.196;AN=56;BaseQRankSum=15.425;DP=655;FS=4.900;HRun=1;HaplotypeScore=112.9624;InbreedingCoeff=0.8644;MQ=75.82;MQ0=4;MQRankSum=-14.232;QD=14.98;ReadPosRankSum=0.632;VQSLOD=3.4344;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1740	0/0:10,0:10:30.10:0,30,479	0/0:36,0:25:74.26:0,74,1055	0/0:37,0:29:62.37:0,62,1067	0/0:21,0:21:60.20:0,60,959	0/0:28,0:28:84.23:0,84,1292	0/0:22,0:22:66.19:0,66,1008	0/0:31,0:31:93.29:0,93,1425	0/0:25,0:25:75.26:0,75,1199	0/0:39,0:39:99:0,117,1871	0/0:9,0:9:24.08:0,24,384	1/1:1,23:24:70.43:469,70,0	1/1:4,26:31:81.54:534,82,0	1/1:1,29:30:88.86:606,89,0	0/0:15,0:15:45.15:0,45,719	0/0:29,0:29:87.27:0,87,1342	0/0:39,0:39:99:0,114,1775	0/0:8,0:8:18.06:0,18,284	0/0:19,0:19:57.19:0,57,890	0/0:26,0:26:72.23:0,72,1126	0/0:23,0:23:66.22:0,66,1046	1/1:2,4:6:11.87:82,12,0	1/1:2,10:11:17.70:114,18,0	0/1:4,10:14:22.36:124,0,22	0/0:27,0:27:78.24:0,78,1201	0/0:20,0:20:60.13:0,60,904	0/0:31,0:31:93.30:0,93,1457	0/0:3,0:3:9.03:0,9,144
chr10	79808081	.	A	AT	630.82	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=6.222;DP=234;FS=18.333;HRun=6;HaplotypeScore=40.2838;InbreedingCoeff=0.7906;MQ=68.33;MQ0=0;MQRankSum=0.320;QD=14.67;ReadPosRankSum=0.571;VQSLOD=1.6368;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:18.34:0,18,210	0/0:6,0:6:18.04:0,18,184	0/1:4,0:3:4.32:4,0,25	./.	0/0:11,0:11:30.05:0,30,299	0/0:18,0:18:45.09:0,45,453	0/0:4,0:4:12.01:0,12,115	0/0:22,0:22:57.11:0,57,575	0/0:5,0:5:15.03:0,15,153	0/0:7,0:7:15.03:0,15,153	0/0:6,0:6:12.03:0,12,122	1/1:3,6:9:12.04:151,12,0	1/1:0,7:7:12.04:151,12,0	1/1:2,6:8:15.05:189,15,0	0/0:5,0:5:12.03:0,12,122	0/0:7,0:7:21.01:0,21,194	0/0:15,0:15:39.09:0,39,398	0/0:5,0:5:15.03:0,15,151	0/0:17,0:17:45.09:0,45,453	0/0:8,0:8:21.05:0,21,214	0/0:4,0:4:6.01:0,6,61	1/1:0,6:6:7.27:78,7,0	1/1:3,5:8:15.05:189,15,0	1/1:1,0:1:3.01:37,3,0	0/0:14,0:14:30.03:0,30,292	0/0:6,0:6:12.03:0,12,122	0/0:10,0:10:30.04:0,30,297	0/0:6,0:6:12.03:0,12,122
chr10	79808090	.	T	TTAAATAAATAAA	4195.55	PASS	AC=24;AF=0.480;AN=50;BaseQRankSum=4.297;DP=222;FS=2.866;HRun=0;HaplotypeScore=89.4619;InbreedingCoeff=0.6706;MQ=53.63;MQ0=0;MQRankSum=-7.170;QD=43.25;ReadPosRankSum=-1.799;VQSLOD=2.9093;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:10:3.01:157,3,0	0/0:7,0:7:9.03:0,9,248	./.	./.	0/0:9,0:9:18.06:0,18,620	1/1:11,7:19:24.08:1270,24,0	0/0:3,0:3:6.02:0,6,199	0/0:23,0:23:12.04:0,12,313	0/0:6,0:6:6.01:0,6,128	0/0:8,0:8:15.05:0,15,400	./.	1/1:6,0:6:3.01:95,3,0	1/1:6,0:6:3.01:117,3,0	1/1:9,0:9:12.03:444,12,0	0/0:5,0:5:6.01:0,6,130	0/0:5,0:5:6.02:0,6,207	0/0:17,0:17:27.09:0,27,841	1/1:7,0:10:18.06:769,18,0	0/0:15,0:15:12.04:0,12,403	0/0:7,0:7:12.04:0,12,302	0/0:2,0:2:2.99:0,3,24	1/1:4,0:4:3.01:60,3,0	1/1:6,0:6:2.97:20,3,0	1/1:1,0:1:3.01:156,3,0	1/1:13,0:13:24.08:936,24,0	1/1:6,0:6:3.01:80,3,0	0/0:12,0:12:27.09:0,27,875	1/1:7,0:7:6.02:92,6,0
chr10	79808207	.	TC	T	2204.77	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.668;DP=450;FS=16.224;HRun=1;HaplotypeScore=47.1807;InbreedingCoeff=0.9823;MQ=80.30;MQ0=0;MQRankSum=-2.910;QD=36.14;ReadPosRankSum=3.084;VQSLOD=1.9570;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:33.11:0,33,527	0/0:3,0:3:9.03:0,9,144	0/0:17,0:16:48.12:0,48,717	0/0:8,0:8:24.06:0,24,343	0/0:27,0:27:81.26:0,81,1267	0/0:28,0:28:84.29:0,84,1342	0/0:18,0:18:54.17:0,54,836	0/0:37,0:37:99:0,111,1766	0/0:7,0:7:21.07:0,21,336	0/0:9,0:9:27.09:0,27,432	0/0:22,0:22:66.23:0,66,1051	1/1:0,6:6:18.06:252,18,0	1/1:0,13:13:39.13:545,39,0	1/1:0,9:9:24.08:336,24,0	0/0:20,0:20:60.20:0,60,959	0/0:14,0:14:42.14:0,42,671	0/0:30,0:30:90.28:0,90,1388	0/0:14,0:14:42.14:0,42,666	0/0:15,0:15:45.15:0,45,709	0/0:17,0:17:51.16:0,51,789	0/0:24,0:24:72.18:0,72,1090	1/1:0,8:8:21.07:294,21,0	1/1:0,7:7:18.06:252,18,0	1/1:0,18:18:51.17:713,51,0	0/0:14,0:14:42.14:0,42,669	0/0:14,0:14:42.14:0,42,672	0/0:22,0:22:66.21:0,66,1023	0/0:15,0:15:42.61:0,43,670
chr10	79808633	.	T	TC	5082.96	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.539;DP=633;FS=16.254;HRun=2;HaplotypeScore=69.3866;InbreedingCoeff=0.9997;MQ=90.60;MQ0=0;MQRankSum=-2.398;QD=45.79;ReadPosRankSum=2.688;VQSLOD=2.6969;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.14:0,54,717	0/0:13,0:13:39.13:0,39,543	0/0:28,0:28:84.16:0,84,1084	0/0:22,0:21:60.08:0,60,792	0/0:47,0:47:99:0,138,1913	0/0:31,0:31:93.30:0,93,1285	0/0:13,0:13:39.13:0,39,546	0/0:25,0:25:75.23:0,75,1002	0/0:19,0:19:54.16:0,54,737	0/0:30,0:30:90.28:0,90,1239	0/0:26,0:26:78.25:0,78,1075	1/1:0,17:17:51.17:815,51,0	1/1:1,22:23:63.21:1007,63,0	1/1:0,13:13:33.11:527,33,0	0/0:23,0:23:69.22:0,69,947	0/0:25,0:25:75.23:0,75,1031	0/0:11,0:11:33.08:0,33,437	0/0:11,0:11:33.11:0,33,461	0/0:28,0:28:78.25:0,78,1076	0/0:33,0:33:96.32:0,96,1341	0/0:22,0:22:60.20:0,60,836	1/1:0,17:17:48.16:767,48,0	1/1:0,30:30:90.31:1439,90,0	1/1:0,11:11:33.11:528,33,0	0/0:18,0:18:54.18:0,54,753	0/0:39,0:39:99:0,114,1595	0/0:27,0:27:81.25:0,81,1101	0/0:13,0:13:39.13:0,39,546
chr10	79809410	.	AT	A	5877.46	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=17.888;DP=726;FS=0.684;HRun=2;HaplotypeScore=88.0770;InbreedingCoeff=0.9983;MQ=79.73;MQ0=0;MQRankSum=0.699;QD=36.73;ReadPosRankSum=2.754;VQSLOD=5.3657;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1910	0/0:12,0:12:36.11:0,36,519	0/0:19,0:19:47.33:0,47,683	0/0:16,0:16:42.13:0,42,610	0/0:34,0:34:99:0,99,1440	0/0:31,0:31:93.25:0,93,1367	0/0:28,0:28:84.28:0,84,1232	0/0:24,0:24:69.23:0,69,1033	0/0:20,0:20:60.20:0,60,877	0/0:39,0:38:99:0,108,1602	0/0:22,0:22:66.16:0,66,962	1/1:0,30:30:81.26:1052,81,0	1/1:0,26:26:78.25:1011,78,0	1/1:0,26:26:75.24:974,75,0	0/0:27,0:27:81.27:0,81,1212	0/0:25,0:25:75.25:0,75,1123	0/0:26,0:26:78.22:0,78,1126	0/0:6,0:6:18.06:0,18,270	0/0:20,0:20:57.18:0,57,819	0/0:33,0:33:99:0,99,1483	0/0:29,0:29:87.26:0,87,1262	1/1:2,27:29:81.26:1052,81,0	1/1:0,17:17:51.17:659,51,0	1/1:0,32:32:87.28:1130,87,0	0/0:25,0:25:75.25:0,75,1124	0/0:38,0:38:99:0,114,1671	0/0:27,0:26:78.21:0,78,1136	0/0:20,0:20:60.20:0,60,890
chr10	79810405	.	GACCATCA	G	1401.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.275;DP=710;FS=0.000;HRun=0;HaplotypeScore=184.7590;InbreedingCoeff=0.9997;MQ=59.36;MQ0=0;MQRankSum=-7.238;QD=56.05;ReadPosRankSum=0.116;VQSLOD=3.3567;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,169,6781	0/0:12,0:12:36.11:0,36,1399	0/0:37,0:31:93.29:0,93,3401	0/0:31,0:28:83.50:0,83,3162	1/1:1,23:25:67.37:1496,67,0	0/0:24,0:24:72.25:0,72,2969	0/0:25,0:25:72.25:0,72,2829	0/0:41,0:41:99:0,123,5030	0/0:21,0:21:63.22:0,63,2505	0/0:24,0:24:72.24:0,72,2841	0/0:19,0:19:54.18:0,54,2242	0/0:22,0:22:66.23:0,66,2703	0/0:19,0:19:57.18:0,57,2243	0/0:22,0:22:66.23:0,66,2743	0/0:15,0:15:45.15:0,45,1889	0/0:27,0:26:81.28:0,81,3279	0/0:24,0:24:72.25:0,72,3006	0/0:40,0:40:99:0,117,4617	0/0:23,0:21:60.21:0,60,2517	0/0:26,0:26:75.26:0,75,2907	0/0:29,0:29:87.30:0,87,3651	0/0:17,0:17:48.16:0,48,1945	0/0:16,0:15:45.15:0,45,1879	0/0:29,0:29:87.30:0,87,3486	0/0:22,0:22:66.23:0,66,2747	0/0:20,0:20:60.21:0,60,2515	0/0:31,0:30:93.32:0,93,3871	0/0:12,0:12:36.12:0,36,1493
chr10	79810415	.	T	TAA	1370.72	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.126;DP=693;FS=10.486;HRun=0;HaplotypeScore=116.9266;InbreedingCoeff=0.9992;MQ=59.98;MQ0=0;MQRankSum=-6.779;QD=44.22;ReadPosRankSum=-2.337;VQSLOD=3.5172;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,154,2462	0/0:11,0:11:33.11:0,33,535	0/0:31,0:29:87.28:0,87,1362	0/0:30,0:28:83.60:0,84,1287	1/1:5,26:31:87.76:1466,88,0	0/0:24,0:24:72.22:0,72,1124	0/0:20,0:20:57.19:0,57,926	0/0:43,0:43:99:0,126,1949	0/0:19,0:19:57.19:0,57,927	0/0:22,0:22:66.21:0,66,1035	0/0:18,0:18:54.18:0,54,870	0/0:23,0:23:69.19:0,69,1086	0/0:18,0:18:54.15:0,54,830	0/0:24,0:24:72.15:0,72,1084	0/0:20,0:20:57.17:0,57,885	0/0:26,0:26:75.24:0,75,1197	0/0:27,0:27:81.24:0,81,1294	0/0:36,0:36:99:0,102,1664	0/0:25,0:24:72.24:0,72,1151	0/0:24,0:24:72.23:0,72,1143	0/0:33,0:33:99:0,99,1614	0/0:15,0:15:45.11:0,45,696	0/0:16,0:15:45.15:0,45,725	0/0:23,0:23:69.19:0,69,1097	0/0:22,0:22:66.21:0,66,1033	0/0:20,0:20:60.20:0,60,958	0/0:31,0:30:93.31:0,93,1490	0/0:10,0:10:30.10:0,30,490
chr10	79810442	.	C	CA	4999.06	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.701;DP=664;FS=4.763;HRun=0;HaplotypeScore=99.9660;InbreedingCoeff=0.9967;MQ=58.20;MQ0=2;MQRankSum=-1.088;QD=41.31;ReadPosRankSum=1.068;VQSLOD=5.0561;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,153,2120	0/0:6,0:6:15.05:0,15,210	0/0:26,0:22:60.19:0,60,824	0/0:31,0:29:81.26:0,81,1115	0/0:26,0:26:60.16:0,60,837	0/0:22,0:22:63.21:0,63,881	0/0:23,0:23:63.21:0,63,877	0/0:32,0:32:93.29:0,93,1271	0/0:17,0:17:51.17:0,51,713	0/0:23,0:23:69.23:0,69,965	0/0:14,0:14:42.14:0,42,587	1/1:4,17:21:60.18:912,60,0	1/1:1,20:21:57.19:910,57,0	1/1:2,21:23:66.23:1053,66,0	0/0:23,0:23:63.18:0,63,844	0/0:24,0:24:72.23:0,72,990	0/0:26,0:26:78.26:0,78,1089	0/0:33,0:33:96.28:0,96,1320	0/0:24,0:24:72.11:0,72,977	0/0:26,0:26:78.23:0,78,1054	0/0:39,0:39:99:0,111,1552	1/1:1,17:18:51.17:812,51,0	1/1:0,14:13:33.11:527,33,0	1/1:2,22:24:50.84:786,51,0	0/0:22,0:22:66.22:0,66,923	0/0:19,0:19:57.19:0,57,798	0/0:21,0:21:57.17:0,57,765	0/0:15,0:15:42.14:0,42,587
chr10	79810491	.	TC	T	3711.38	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=16.269;DP=678;FS=23.063;HRun=4;HaplotypeScore=99.5893;InbreedingCoeff=0.9983;MQ=58.67;MQ0=2;MQRankSum=-3.459;QD=28.77;ReadPosRankSum=-0.345;VQSLOD=1.7483;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:48:99:0,126,1735	0/0:7,0:7:21.07:0,21,294	0/0:21,0:12:21.06:0,21,269	0/0:22,0:16:36.08:0,36,471	0/0:22,0:22:58.55:0,59,689	0/0:25,0:25:75.22:0,75,1015	0/0:23,0:23:66.21:0,66,906	0/0:33,0:33:84.26:0,84,1154	0/0:22,0:22:63.21:0,63,878	0/0:32,0:32:90.28:0,90,1230	0/0:16,0:16:48.15:0,48,654	1/1:1,23:24:63.03:696,63,0	1/1:1,22:23:63.05:703,63,0	1/1:1,22:23:65.90:680,66,0	0/0:25,0:25:72.24:0,72,1008	0/0:21,0:21:60.20:0,60,839	0/0:29,0:29:81.23:0,81,1092	0/0:26,0:26:63.21:0,63,882	0/0:31,0:31:90.27:0,90,1222	0/0:27,0:27:78.25:0,78,1075	0/0:37,0:37:99:0,105,1429	1/1:2,17:19:50.98:538,51,0	1/1:1,15:16:44.94:460,45,0	1/1:3,21:24:57.45:634,57,0	0/0:24,0:24:69.22:0,69,951	0/0:22,0:22:63.21:0,63,881	0/0:25,0:25:72.23:0,72,980	0/0:11,0:11:33.11:0,33,462
chr10	79810910	.	C	CA	3947.67	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-13.217;DP=584;FS=4.276;HRun=5;HaplotypeScore=51.7137;InbreedingCoeff=0.9976;MQ=86.96;MQ0=0;MQRankSum=-1.986;QD=35.89;ReadPosRankSum=2.540;VQSLOD=3.5789;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.20:0,81,870	0/0:6,0:6:18.05:0,18,193	0/0:20,0:20:42.10:0,42,450	0/0:19,0:19:48.11:0,48,508	0/0:27,0:27:78.19:0,78,838	0/0:17,0:18:47.15:0,47,490	0/0:17,0:17:51.13:0,51,548	0/0:32,0:32:78.18:0,78,825	0/0:16,0:16:48.12:0,48,516	0/0:30,0:31:83.22:0,83,869	0/0:25,0:25:66.17:0,66,708	1/1:0,22:22:60.20:789,60,0	1/1:1,15:16:45.15:592,45,0	1/1:1,21:22:57.19:750,57,0	0/0:32,0:32:96.24:0,96,1032	0/0:21,0:21:60.14:0,60,638	0/0:22,0:22:63.13:0,63,666	0/0:12,0:12:36.07:0,36,376	0/0:22,0:22:63.16:0,63,677	0/0:26,0:26:69.16:0,69,734	0/0:24,0:24:63.16:0,63,677	1/1:0,12:12:36.12:474,36,0	1/1:1,14:15:39.13:513,39,0	1/1:1,22:23:63.20:829,63,0	0/0:19,0:19:57.12:0,57,603	0/0:16,0:16:48.10:0,48,503	0/0:33,0:33:99:0,99,1064	0/0:7,0:8:21.94:0,22,227
chr10	79812465	.	TA	T	2050.83	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.336;DP=554;FS=1.291;HRun=1;HaplotypeScore=88.3784;InbreedingCoeff=0.9879;MQ=63.54;MQ0=0;MQRankSum=-13.505;QD=18.31;ReadPosRankSum=0.160;VQSLOD=3.8234;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.11:0,54,680	0/0:9,0:9:27.06:0,27,328	0/0:16,1:15:29.76:0,30,499	0/0:6,0:5:15.02:0,15,181	0/0:33,0:33:89.86:0,90,1114	0/0:20,0:20:60.18:0,60,780	0/0:20,0:20:60.15:0,60,749	0/0:28,0:28:84.23:0,84,1059	0/0:19,0:19:57.10:0,57,664	0/0:27,0:27:78.23:0,78,986	0/0:30,0:30:90.22:0,90,1117	1/1:0,15:15:35.57:282,36,0	1/1:3,9:12:32.66:295,33,0	1/1:3,11:14:37.74:260,38,0	0/0:16,0:16:48.11:0,48,591	0/0:21,0:21:63.16:0,63,790	0/0:15,0:15:45.15:0,45,597	0/0:9,0:9:13.90:0,14,75	0/0:20,0:20:60.05:0,60,686	0/0:31,0:31:93.11:0,93,1178	0/0:11,0:11:33.11:0,33,436	1/1:4,19:23:65.95:513,66,0	1/1:6,25:31:79.81:577,80,0	1/1:5,12:17:39:313,39,0	0/0:25,0:25:75.20:0,75,948	0/0:20,0:20:46.95:0,47,260	0/0:35,0:35:99:0,105,1308	0/0:10,0:10:13.71:0,14,67
chr10	79812466	.	A	ATTT	4176	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.853;DP=553;FS=2.249;HRun=7;HaplotypeScore=106.7627;InbreedingCoeff=0.9782;MQ=63.63;MQ0=0;MQRankSum=-11.497;QD=26.77;ReadPosRankSum=0.636;VQSLOD=1.5424;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:51.10:0,51,658	0/0:9,0:9:27.06:0,27,336	0/0:17,0:15:14.88:0,15,380	0/0:6,0:5:12.03:0,12,148	0/0:32,0:32:80.92:0,81,1064	0/0:20,0:20:60.13:0,60,760	0/0:19,0:19:51.14:0,51,677	0/0:27,0:27:78.20:0,78,990	0/0:19,0:19:48.12:0,48,616	0/0:26,0:26:66.19:0,66,872	0/0:30,0:30:81.22:0,81,1057	1/1:16,0:16:35.92:362,36,0	1/1:12,0:12:28.32:250,28,0	1/1:15,0:15:38.47:427,38,0	0/0:15,0:15:45.12:0,45,581	0/0:20,0:20:57.16:0,57,745	0/0:15,0:15:45.15:0,45,614	1/1:2,6:8:9.03:187,9,0	0/0:19,0:19:39.11:0,39,529	0/0:32,0:32:90.17:0,90,1095	0/0:11,0:11:30.04:0,30,384	1/1:23,0:23:64.75:675,65,0	1/1:32,0:32:71.48:766,71,0	1/1:17,0:17:31.40:300,31,0	0/0:24,0:24:69.20:0,69,906	1/1:5,16:23:54.13:960,54,0	0/0:35,0:35:96.25:0,96,1252	1/1:1,9:10:12.04:249,12,0
chr10	79812469	.	T	TGTTTG	6213.27	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.474;DP=558;FS=0.395;HRun=0;HaplotypeScore=125.2752;InbreedingCoeff=0.9727;MQ=64.09;MQ0=0;MQRankSum=-12.213;QD=52.65;ReadPosRankSum=0.278;VQSLOD=5.1684;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:58.06:0,58,1198	0/0:10,0:10:27.09:0,27,605	0/0:18,0:16:39.02:0,39,777	0/0:8,0:7:18.01:0,18,327	0/0:31,0:31:90.69:0,91,1836	0/0:20,0:20:60.21:0,60,1317	0/0:19,0:19:57.18:0,57,1184	0/0:28,0:28:81.27:0,81,1761	0/0:19,0:19:57.16:0,57,1160	0/0:27,0:27:75.20:0,75,1585	0/0:29,0:29:87.28:0,87,1898	1/1:6,8:14:39.12:859,39,0	1/1:7,5:14:37.66:670,38,0	1/1:0,11:16:39.13:904,39,0	0/0:15,0:15:45.15:0,45,1016	0/0:20,0:20:60.20:0,60,1332	0/0:16,0:16:48.15:0,48,1071	0/0:8,0:8:8.33:0,8,42	0/0:16,0:16:48.11:0,48,986	0/0:32,0:32:96.31:0,96,1995	0/0:11,0:11:33.10:0,33,683	1/1:5,16:23:69.23:1463,69,0	1/1:8,21:33:67.08:1605,67,0	1/1:7,9:18:44.28:712,44,0	0/0:26,0:26:75.23:0,75,1597	0/0:23,0:23:37.67:0,38,249	0/0:34,0:34:99:0,102,2204	0/0:9,0:9:8.88:0,9,29
chr10	79812549	.	A	AC	725.91	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.033;DP=610;FS=2.965;HRun=4;HaplotypeScore=75.9358;InbreedingCoeff=0.9960;MQ=78.69;MQ0=0;MQRankSum=0.094;QD=29.04;ReadPosRankSum=-0.093;VQSLOD=3.3585;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:74.88:0,75,827	0/0:9,0:9:27.08:0,27,306	0/0:15,0:15:33.06:0,33,356	0/0:17,0:17:42:0,42,427	0/0:25,0:25:63.18:0,63,715	1/1:4,21:25:60.20:821,60,0	0/0:20,0:20:60.16:0,60,670	0/0:31,0:31:84.21:0,84,930	0/0:21,0:21:63.18:0,63,715	0/0:22,0:22:66.17:0,66,739	0/0:38,0:38:99:0,108,1215	0/0:21,0:21:57.16:0,57,646	0/0:15,0:15:39.06:0,39,428	0/0:25,0:25:66.19:0,66,748	0/0:19,0:19:54.15:0,54,613	0/0:24,0:24:63.16:0,63,705	0/0:22,0:22:60.17:0,60,680	0/0:11,0:11:30.09:0,30,340	0/0:12,0:12:36.10:0,36,408	0/0:46,0:46:99:0,135,1511	0/0:23,0:23:66.19:0,66,749	0/0:22,0:22:60.17:0,60,679	0/0:24,0:24:66.66:0,67,749	0/0:17,0:17:45.13:0,45,510	0/0:19,0:19:54.15:0,54,613	0/0:30,0:30:87.24:0,87,978	0/0:23,0:22:69.20:0,69,783	0/0:8,0:8:24.07:0,24,272
chr10	79812932	.	G	GT	574.46	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.635;DP=300;FS=23.896;HRun=3;HaplotypeScore=37.3450;InbreedingCoeff=0.8689;MQ=79.03;MQ0=0;MQRankSum=-2.595;QD=24.98;ReadPosRankSum=-0.085;VQSLOD=1.6668;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:10.71:0,11,141	0/0:9,0:9:24.07:0,24,288	0/0:8,0:8:18.05:0,18,215	0/0:9,0:10:17.89:0,18,179	0/0:14,0:14:39.10:0,39,455	0/0:11,0:11:9.53:0,10,170	0/0:4,0:4:12.04:0,12,144	0/0:29,0:29:84.26:0,84,1008	0/0:10,0:10:30.09:0,30,360	0/0:15,0:15:39.12:0,39,468	0/0:13,0:13:33.09:0,33,386	1/1:1,5:6:12.04:165,12,0	1/1:0,3:3:9.03:126,9,0	1/1:1,2:3:6.02:84,6,0	0/0:5,0:5:15.05:0,15,180	0/0:6,0:6:18.03:0,18,193	0/0:22,0:22:63.19:0,63,756	0/0:13,0:13:36.11:0,36,428	0/0:20,0:20:57.15:0,57,669	0/0:13,0:13:39.12:0,39,468	0/0:6,0:6:15.05:0,15,179	1/1:0,4:4:9.03:122,9,0	1/1:0,5:5:15.05:202,15,0	1/1:0,2:2:3.01:41,3,0	0/0:10,0:10:25.67:0,26,300	0/0:19,0:19:57.17:0,57,684	0/0:19,0:19:54.05:0,54,616	0/0:15,0:15:42.13:0,42,503
chr10	79812933	.	T	TTTATTATTATTATTA	1667.65	PASS	AB=1.000;AC=13;AF=0.250;AN=52;BaseQRankSum=3.569;DP=306;FS=4.430;HRun=0;HaplotypeScore=126.7411;InbreedingCoeff=0.7238;MQ=78.44;MQ0=0;MQRankSum=-6.053;QD=33.35;ReadPosRankSum=-0.193;VQSLOD=2.5265;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:7:5.90:43,6,0	0/0:9,0:9:18.06:0,18,714	0/0:8,0:8:2.83:0,3,24	0/0:10,0:10:8.88:0,9,203	0/0:14,0:14:33.10:0,33,1283	1/1:7,5:12:15.05:1071,15,0	0/0:4,0:4:9.03:0,9,377	0/0:30,0:30:39.13:0,39,1342	0/0:10,0:10:24.08:0,24,894	0/0:14,0:14:24.08:0,24,996	0/0:13,0:13:24.07:0,24,906	1/1:6,0:6:0.94:3,1,0	1/1:4,0:4:4.42:198,4,0	1/1:5,0:5:6.96:298,7,0	0/0:5,0:5:9.03:0,9,290	0/0:6,0:6:12.04:0,12,428	0/0:22,0:22:57.20:0,57,2286	0/0:13,0:13:24.08:0,24,765	0/0:19,0:20:30.10:0,30,993	0/0:13,0:13:30.10:0,30,1041	0/0:6,0:6:9.03:0,9,336	./.	0/1:5,0:5:0:0,0,0	./.	1/1:9,0:11:3.01:196,3,0	0/0:19,0:19:45.15:0,45,1866	0/0:18,0:19:42.13:0,42,1562	0/0:15,0:15:45.14:0,45,1632
chr10	79813140	.	AT	A	303.07	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.536;DP=372;FS=0.000;HRun=7;HaplotypeScore=42.7246;InbreedingCoeff=0.9713;MQ=74.32;MQ0=0;MQRankSum=-1.541;QD=18.94;ReadPosRankSum=0.922;VQSLOD=2.8184;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:39.09:398,39,0	0/0:10,0:10:21.07:0,21,263	0/0:9,0:9:21.07:0,21,264	0/0:8,0:8:15.05:0,15,185	0/0:14,0:14:39.11:0,39,476	0/0:15,0:15:39.12:0,39,491	0/0:15,0:15:45.13:0,45,554	0/0:18,0:18:51.15:0,51,630	0/0:12,0:12:36.12:0,36,453	0/0:15,0:15:45.13:0,45,553	0/0:10,0:10:30.09:0,30,366	0/0:18,0:18:54.17:0,54,677	0/0:11,0:11:33.11:0,33,415	0/0:11,0:11:33.11:0,33,415	0/0:14,0:14:42.11:0,42,504	0/0:13,0:13:39.12:0,39,491	0/0:14,0:14:42.13:0,42,526	0/0:8,0:8:24.08:0,24,302	0/0:15,0:15:42.12:0,42,516	0/0:16,0:16:48.14:0,48,590	0/0:9,0:9:27.09:0,27,340	0/0:13,0:13:39.12:0,39,490	0/0:11,0:11:33.11:0,33,415	0/0:12,0:12:33.11:0,33,415	0/0:15,0:15:45.14:0,45,565	0/0:22,0:22:60.18:0,60,744	0/0:18,0:18:51.16:0,51,642	0/0:10,0:10:30.10:0,30,377
chr10	79813629	.	CT	C	1717.59	PASS	AB=0.876;AC=16;AF=0.286;AN=56;BaseQRankSum=8.384;DP=525;FS=2.493;HRun=11;HaplotypeScore=77.7601;InbreedingCoeff=0.7662;MQ=66.26;MQ0=2;MQRankSum=0.775;QD=11.15;ReadPosRankSum=3.420;VQSLOD=3.4488;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,1:50:99:0,103,1231	0/0:8,0:9:22.28:0,22,219	0/1:16,3:16:25.12:25,0,113	0/0:18,0:13:18.93:0,19,173	0/0:12,1:13:5.42:0,5,256	1/1:2,0:17:24.44:71,24,0	0/0:18,2:21:7.68:0,8,461	0/0:29,0:29:57.14:0,57,602	0/0:15,0:15:34.29:0,34,332	0/1:14,2:16:16.22:16,0,243	0/0:18,0:18:42.09:0,42,435	1/1:3,9:12:26.95:222,27,0	1/1:3,14:17:38.95:320,39,0	1/1:5,11:16:11.82:240,12,0	0/0:11,0:11:27.04:0,27,272	0/0:11,0:11:30.08:0,30,320	0/0:35,0:34:96.20:0,96,1006	0/0:18,1:20:29.25:0,29,478	0/0:18,0:17:39.10:0,39,416	0/0:20,0:21:38.89:0,39,376	0/0:11,2:14:4.59:0,5,289	1/1:9,16:25:44.91:369,45,0	1/1:2,9:12:29:228,29,0	1/1:2,17:20:52.98:425,53,0	0/0:19,0:19:17.90:0,18,142	0/0:18,1:19:23.45:0,23,437	0/0:18,3:21:26.49:0,26,487	0/0:7,0:7:18.05:0,18,192
chr10	79813641	.	CAGAGCTGGGGACCGAACCCA	C	943.67	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.373;DP=564;FS=17.816;HRun=0;HaplotypeScore=287.4942;InbreedingCoeff=0.9735;MQ=63.23;MQ0=9;MQRankSum=-2.974;QD=55.51;ReadPosRankSum=0.193;VQSLOD=1.7909;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:48:99:0,135,8875	0/0:9,0:9:24.07:0,24,1523	0/0:30,0:17:15.68:0,16,1218	0/0:51,0:23:32.38:0,32,1406	0/0:15,0:15:42.11:0,42,2917	0/0:17,0:17:42.03:0,42,2839	0/0:18,0:18:54.09:0,54,2395	0/0:25,0:25:75.17:0,75,2786	0/0:14,0:14:39.08:0,39,3005	0/0:15,0:15:45.07:0,45,2828	0/0:18,0:17:48.11:0,48,3142	0/0:13,0:13:35.93:0,36,2070	0/0:16,0:16:45.04:0,45,2525	0/0:15,0:15:45.13:0,45,2938	0/0:12,0:12:36:0,36,2215	0/0:13,0:13:39.09:0,39,2963	0/0:33,0:33:96.22:0,96,6814	0/0:20,0:19:60.15:0,60,4772	0/0:21,0:20:57.16:0,57,3146	0/0:16,0:16:42.09:0,42,2498	0/0:13,0:13:36.06:0,36,1848	0/0:21,0:21:63.13:0,63,4252	0/0:14,0:14:42.06:0,42,2477	0/0:26,0:24:72.14:0,72,5249	1/1:0,17:17:18.06:1034,18,0	0/0:22,0:22:66.17:0,66,4233	0/0:21,0:21:57.06:0,57,3484	0/0:8,0:8:24.01:0,24,1706
chr10	79815411	.	T	TACAC	3584.19	PASS	AB=0.747;AC=19;AF=0.339;AN=56;BaseQRankSum=2.164;DP=745;FS=2.114;HRun=0;HaplotypeScore=150.2477;InbreedingCoeff=0.4707;MQ=58.88;MQ0=11;MQRankSum=0.055;QD=10.99;ReadPosRankSum=-2.046;VQSLOD=2.7653;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:38:31.42:0,31,692	0/0:11,0:13:27.08:0,27,390	0/0:38,0:19:3.01:0,3,47	0/1:28,0:14:0.02:0,0,0	0/0:30,0:34:49.68:0,50,655	0/1:9,0:22:45.17:70,0,45	0/0:29,0:32:42.74:0,43,662	0/1:30,0:29:13.74:14,0,210	0/0:26,0:29:51.08:0,51,677	0/0:34,0:36:47.13:0,47,647	0/0:21,0:22:40.18:0,40,634	1/1:15,8:32:20.51:383,21,0	1/1:9,14:27:25.95:407,26,0	0/1:13,12:28:18.61:429,0,19	0/0:25,0:30:42.11:0,42,571	0/0:22,0:29:47.60:0,48,771	0/0:18,0:20:33.06:0,33,432	1/1:8,0:8:8.94:92,9,0	0/0:19,0:19:6.60:0,7,292	0/0:22,0:24:12.26:0,12,502	0/0:36,0:38:59.46:0,59,856	1/1:10,6:17:14.79:299,15,0	0/1:9,12:22:35.76:203,0,36	0/1:17,14:36:54.23:637,0,54	0/1:15,12:32:4.38:265,0,4	1/1:27,0:27:44.87:535,45,0	0/0:16,0:16:29.82:0,30,411	1/1:15,0:15:22.98:250,23,0
chr10	79815441	.	C	CACACACAA	1195.02	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=9.799;DP=804;FS=13.544;HRun=0;HaplotypeScore=228.1211;InbreedingCoeff=0.2494;MQ=59.13;MQ0=11;MQRankSum=-3.692;QD=5.09;ReadPosRankSum=3.739;VQSLOD=1.1561;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:90.03:0,90,1737	0/0:18,0:18:53.99:0,54,937	0/0:36,0:14:37.13:0,37,333	0/0:37,0:17:29.92:0,30,280	0/0:29,0:29:68.98:0,69,1377	0/0:28,0:27:64.78:0,65,619	0/0:41,0:41:99:0,108,1679	0/0:39,0:37:30.14:0,30,823	0/0:32,0:32:80.33:0,80,1379	0/0:25,0:25:70:0,70,1310	0/0:25,0:25:56.82:0,57,1266	0/1:28,0:28:27.80:28,0,122	0/1:29,0:29:23.78:24,0,215	0/1:27,0:27:38.71:39,0,218	0/0:29,0:28:75.06:0,75,1361	0/0:25,0:25:72.18:0,72,1590	0/0:18,0:18:47.99:0,48,884	1/1:5,2:7:16.61:258,17,0	0/0:17,0:17:47.26:0,47,773	0/0:29,0:29:47.13:0,47,1179	0/0:68,0:67:99:0,171,2441	0/1:16,0:16:29.71:30,0,82	0/1:21,0:21:16.09:16,0,182	0/1:39,0:38:41.28:41,0,433	0/1:32,0:32:15.55:16,0,242	1/1:18,1:21:45.70:584,46,0	0/0:22,0:22:62.91:0,63,961	1/1:14,1:15:2.65:325,3,0
chr10	79815448	.	T	TCACA	1451.15	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=9.564;DP=804;FS=60.225;HRun=0;HaplotypeScore=179.8533;InbreedingCoeff=0.5189;MQ=59.79;MQ0=8;MQRankSum=-3.967;QD=10.67;ReadPosRankSum=-0.260;VQSLOD=0.8297;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:47.25:0,47,1453	0/0:18,0:18:48.15:0,48,786	0/0:37,0:19:39.19:0,39,550	0/0:42,0:23:26.17:0,26,608	0/0:30,0:30:30.71:0,31,728	0/0:26,0:25:69.21:0,69,1090	0/0:38,0:39:87.10:0,87,1379	0/0:37,0:36:84.15:0,84,1336	0/0:27,0:27:63.19:0,63,1042	0/0:26,0:26:41.15:0,41,730	0/0:21,0:21:51.17:0,51,852	0/1:23,0:23:43.58:44,0,256	0/0:29,0:29:4.21:0,4,540	0/1:24,0:24:76.17:76,0,450	0/0:32,0:31:75.22:0,75,1214	0/0:26,0:26:69.18:0,69,1087	0/0:19,0:19:48.02:0,48,707	1/1:8,1:9:15.85:206,16,0	0/0:23,0:23:29.34:0,29,632	0/0:27,0:27:60.08:0,60,955	0/0:75,0:75:99:0,105,2487	0/0:16,0:16:0.81:0,1,270	0/0:17,0:17:6.24:0,6,294	0/1:38,0:37:10.77:11,0,701	0/0:27,0:27:15.90:0,16,540	1/1:21,6:27:58.77:945,59,0	0/0:23,0:23:54.17:0,54,894	1/1:12,3:15:23.29:324,23,0
chr10	79815495	.	TAC	T	475.94	PASS	AB=0.932;AC=4;AF=0.071;AN=56;BaseQRankSum=5.479;DP=850;FS=0.818;HRun=0;HaplotypeScore=134.2297;InbreedingCoeff=0.4759;MQ=54.81;MQ0=26;MQRankSum=2.596;QD=8.07;ReadPosRankSum=0.212;VQSLOD=3.2190;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,117,1898	0/0:18,0:18:47.65:0,48,757	0/0:57,0:17:39.12:0,39,609	0/0:74,0:27:48.11:0,48,715	0/0:26,0:26:66.21:0,66,1064	0/0:22,0:22:63.20:0,63,1022	0/0:40,0:41:92.71:0,93,1461	0/0:42,0:40:96.10:0,96,1551	0/0:26,0:26:63.22:0,63,1046	0/0:34,0:33:93.31:0,93,1487	0/1:14,1:15:8.08:8,0,408	0/0:17,0:17:39.13:0,39,627	0/0:32,0:32:84.29:0,84,1384	0/0:25,0:25:66.21:0,66,1077	0/0:37,0:37:95.29:0,95,1509	0/0:28,0:28:69.24:0,69,1127	0/0:20,0:20:48.16:0,48,782	0/0:4,0:4:11.95:0,12,92	0/0:20,0:20:57.18:0,57,898	0/0:28,0:28:78.25:0,78,1269	0/0:89,1:89:99:0,137,3238	0/0:22,0:22:22.58:0,23,891	0/0:15,0:15:33.11:0,33,537	0/0:31,0:31:81.28:0,81,1342	1/1:13,6:19:45.10:565,45,0	0/0:26,0:26:34.13:0,34,366	0/1:23,2:24:13.03:13,0,868	0/0:10,0:10:17.31:0,17,122
chr10	79815504	.	A	ACG	1315.05	PASS	AB=0.619;AC=5;AF=0.089;AN=56;BaseQRankSum=8.885;DP=839;FS=4.311;HRun=0;HaplotypeScore=128.2567;InbreedingCoeff=0.8060;MQ=53.82;MQ0=23;MQRankSum=-7.180;QD=32.07;ReadPosRankSum=0.310;VQSLOD=5.3954;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,123,1786	0/0:16,0:16:48.16:0,48,733	0/0:50,0:16:45.13:0,45,650	0/0:66,0:18:54.10:0,54,767	0/0:25,0:25:66.21:0,66,987	0/0:25,0:25:72.19:0,72,1015	0/0:35,0:35:96.18:0,96,1374	0/0:42,0:41:99:0,111,1558	0/0:27,0:27:72.20:0,72,1028	0/0:34,0:33:99:0,99,1434	0/0:14,0:14:42.01:0,42,489	0/0:22,0:22:54.11:0,54,715	0/0:33,0:33:90.28:0,90,1328	0/0:26,0:26:72.16:0,72,1028	0/0:39,0:39:99:0,114,1522	0/0:28,0:28:81.22:0,81,1145	0/0:21,0:21:59.32:0,59,766	1/1:1,4:5:14.94:246,15,0	0/0:22,0:22:63.14:0,63,887	0/0:31,0:31:87.24:0,87,1237	0/0:85,0:85:99:0,229,3196	0/0:22,0:22:63.09:0,63,886	0/0:14,0:14:33.11:0,33,501	0/0:30,0:30:84.24:0,84,1255	0/0:23,0:23:55.29:0,55,362	0/1:10,16:25:0.77:907,0,1	0/0:23,0:22:69.10:0,69,957	1/1:4,6:10:3.19:277,3,0
chr10	79815795	.	A	AC	1098.67	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-0.166;DP=567;FS=2.328;HRun=6;HaplotypeScore=58.3206;InbreedingCoeff=0.9477;MQ=60.73;MQ0=6;MQRankSum=-0.709;QD=23.88;ReadPosRankSum=2.364;VQSLOD=3.2409;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:68.86:0,69,702	0/0:9,0:9:24.05:0,24,245	0/0:22,0:12:23.22:0,23,261	0/0:29,0:17:43.30:0,43,384	0/0:25,0:25:63.13:0,63,637	0/0:15,0:15:45.10:0,45,457	0/0:18,0:18:45.07:0,45,445	0/0:27,0:27:72.12:0,72,714	0/0:23,0:23:66.14:0,66,667	0/0:15,0:15:45.09:0,45,449	0/0:23,0:23:54.11:0,54,546	0/0:27,0:27:65.69:0,66,642	0/0:23,0:23:66.14:0,66,666	0/0:16,0:17:41.09:0,41,391	0/0:15,0:15:45.10:0,45,459	0/0:16,0:16:43.65:0,44,432	0/0:32,0:32:93.20:0,93,942	1/1:0,17:17:48.09:584,48,0	0/0:20,0:20:48.08:0,48,481	0/0:27,0:27:72.16:0,72,732	0/0:12,0:12:33.07:0,33,337	0/0:17,0:17:48.11:0,48,489	0/0:16,0:16:14.34:0,14,339	0/0:18,0:18:48.10:0,48,484	0/0:24,0:24:69.10:0,69,686	1/1:2,16:18:5.51:384,6,0	0/0:23,0:23:60.11:0,60,605	1/1:1,10:11:21.07:264,21,0
chr10	79815972	.	ATGT	A	1603.76	PASS	AB=0.512;AC=5;AF=0.089;AN=56;BaseQRankSum=9.790;DP=641;FS=1.364;HRun=0;HaplotypeScore=99.2287;InbreedingCoeff=0.8127;MQ=70.12;MQ0=0;MQRankSum=-9.212;QD=45.82;ReadPosRankSum=2.423;VQSLOD=5.6497;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:99:0,117,2632	0/0:16,0:16:48.15:0,48,1084	0/0:25,0:21:58.44:0,58,1276	0/0:29,0:26:40.05:0,40,1394	0/0:20,0:20:57.20:0,57,1313	0/0:14,0:14:39.13:0,39,889	0/0:28,0:28:81.25:0,81,1820	0/0:37,0:37:99:0,102,2393	0/0:25,0:25:72.25:0,72,1695	0/0:22,0:22:66.22:0,66,1500	0/0:18,0:18:54.19:0,54,1276	0/0:25,0:25:72.23:0,72,1598	0/0:22,0:22:63.19:0,63,1397	0/0:15,0:15:45.15:0,45,1060	0/0:21,0:21:63.22:0,63,1486	0/0:16,0:16:48.16:0,48,1134	0/0:41,0:41:99:0,120,2759	1/1:0,7:7:21.07:370,21,0	0/0:24,0:23:63.22:0,63,1468	0/0:26,0:26:78.27:0,78,1841	0/0:38,0:38:99:0,111,2572	0/0:18,0:18:51.18:0,51,1206	0/0:14,0:14:39.13:0,39,899	0/0:30,0:30:87.28:0,87,1980	0/0:15,0:15:42.14:0,42,973	0/1:1,20:21:7.76:993,0,8	0/0:27,0:27:81.28:0,81,1884	1/1:0,7:7:21.07:370,21,0
chr10	79816791	.	G	GA	1018.25	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.049;DP=491;FS=6.719;HRun=6;HaplotypeScore=53.6436;InbreedingCoeff=0.9631;MQ=82.45;MQ0=0;MQRankSum=-1.361;QD=24.84;ReadPosRankSum=0.262;VQSLOD=3.1155;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.16:0,72,734	0/0:11,0:11:33.04:0,33,322	0/0:18,0:18:20.06:0,20,217	0/0:14,0:12:24.05:0,24,244	0/0:28,0:28:84.19:0,84,856	0/0:19,0:19:57.12:0,57,574	0/0:14,0:14:42.10:0,42,428	0/0:32,0:32:75.13:0,75,753	0/0:14,0:14:36.05:0,36,359	0/0:25,0:25:60.02:0,60,592	0/0:14,0:14:42.03:0,42,412	0/0:21,0:21:62.92:0,63,617	0/0:18,0:18:42.06:0,42,420	0/0:9,0:9:24.05:0,24,245	0/0:19,0:19:48.09:0,48,482	0/0:13,0:13:36.08:0,36,367	0/0:15,0:15:45.08:0,45,450	1/1:2,7:9:21.02:247,21,0	0/0:10,0:10:27.02:0,27,257	0/0:26,0:26:72.14:0,72,726	0/0:16,0:16:36.06:0,36,360	0/0:18,0:18:54.12:0,54,550	0/0:15,0:15:45.08:0,45,451	0/0:12,0:11:30.06:0,30,306	0/0:17,0:17:48.05:0,48,467	1/1:5,21:26:8.15:716,8,0	0/0:26,0:26:72.16:0,72,733	1/1:0,6:6:15.05:189,15,0
chr10	79817229	.	A	AT	1779.57	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.847;DP=676;FS=0.000;HRun=2;HaplotypeScore=69.8038;InbreedingCoeff=0.9943;MQ=88.18;MQ0=0;MQRankSum=-1.845;QD=37.86;ReadPosRankSum=1.264;VQSLOD=4.2236;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:96.30:0,96,1190	0/0:5,0:5:15.05:0,15,186	0/0:28,0:28:72.20:0,72,853	0/0:21,0:21:54.17:0,54,663	0/0:29,0:29:81.25:0,81,1003	0/0:20,0:20:60.19:0,60,744	0/0:28,0:28:81.25:0,81,999	0/0:31,0:30:87.26:0,87,1057	0/0:34,0:34:99:0,102,1251	0/0:31,0:31:90.28:0,90,1114	0/0:20,0:20:60.19:0,60,744	0/0:23,0:23:69.20:0,69,843	0/0:25,0:25:75.22:0,75,917	0/0:20,0:20:57.17:0,57,694	0/0:29,0:29:87.23:0,87,1039	0/0:27,0:27:81.25:0,81,1004	0/0:24,0:24:72.23:0,72,893	1/1:0,11:11:33.11:475,33,0	0/0:27,0:27:75.23:0,75,918	0/0:29,0:29:87.27:0,87,1079	0/0:22,0:22:63.20:0,63,781	0/0:23,0:23:69.22:0,69,855	0/0:25,0:25:72.23:0,72,892	0/0:18,0:18:51.16:0,51,632	0/0:21,0:21:60.19:0,60,744	1/1:1,16:17:45.13:629,45,0	0/0:32,0:32:90.27:0,90,1102	1/1:0,19:19:57.19:819,57,0
chr10	79817495	.	A	AT	528.09	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.679;DP=605;FS=3.867;HRun=1;HaplotypeScore=61.2064;InbreedingCoeff=0.9825;MQ=83.49;MQ0=0;MQRankSum=-2.496;QD=29.34;ReadPosRankSum=1.337;VQSLOD=3.4212;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:39.13:623,39,0	0/0:5,0:5:15.05:0,15,210	0/0:16,0:16:48.16:0,48,658	0/0:19,0:19:54.18:0,54,755	0/0:31,0:31:93.31:0,93,1296	0/0:25,0:25:75.24:0,75,1027	0/0:9,0:9:27.09:0,27,378	0/0:32,0:32:90.29:0,90,1236	0/0:26,0:26:75.25:0,75,1043	0/0:26,0:26:75.24:0,75,1033	0/0:28,0:28:84.27:0,84,1157	0/0:18,0:18:51.16:0,51,695	0/0:16,0:16:45.15:0,45,627	0/0:17,0:17:51.17:0,51,708	0/0:22,0:22:66.22:0,66,919	0/0:19,0:19:54.18:0,54,754	0/0:15,0:15:45.15:0,45,629	0/0:11,0:11:33.08:0,33,440	0/0:19,0:19:54.18:0,54,754	0/0:45,0:45:99:0,132,1812	0/0:27,0:27:81.26:0,81,1116	0/0:31,0:31:93.30:0,93,1284	0/0:21,0:21:63.20:0,63,862	0/0:12,0:12:28.91:0,29,382	0/0:27,0:27:81.27:0,81,1133	0/0:26,0:26:78.25:0,78,1077	0/0:31,0:31:93.30:0,93,1282	0/0:13,0:13:39.13:0,39,545
chr10	79817552	.	CA	C	211.87	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.540;DP=562;FS=1.316;HRun=5;HaplotypeScore=53.6533;InbreedingCoeff=0.9767;MQ=76.57;MQ0=0;MQRankSum=-3.247;QD=16.30;ReadPosRankSum=0.150;VQSLOD=2.8714;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,11:13:27.08:306,27,0	0/0:7,0:7:21.04:0,21,268	0/0:11,0:11:18.06:0,18,228	0/0:11,0:11:26.44:0,26,308	0/0:30,0:30:81.21:0,81,1071	0/0:35,0:35:96.32:0,96,1313	0/0:20,0:20:60.20:0,60,820	0/0:27,0:27:78.25:0,78,1053	0/0:26,0:26:75.24:0,75,1009	0/0:24,0:24:72.23:0,72,971	0/0:28,0:28:75.25:0,75,1025	0/0:10,0:10:30.10:0,30,410	0/0:21,0:21:63.21:0,63,858	0/0:10,0:10:30.07:0,30,376	0/0:21,0:21:60.20:0,60,820	0/0:18,0:18:54.17:0,54,724	0/0:12,0:12:33.08:0,33,432	0/0:7,0:7:18.06:0,18,246	0/0:22,0:22:60.18:0,60,792	0/0:37,0:37:99:0,102,1386	0/0:21,0:21:57.19:0,57,780	0/0:27,0:27:72.23:0,72,969	0/0:28,0:28:81.27:0,81,1103	0/0:12,0:12:36.12:0,36,492	0/0:21,0:21:60.18:0,60,803	0/0:23,0:23:63.21:0,63,862	0/0:28,0:28:84.28:0,84,1149	0/0:12,0:12:36.12:0,36,493
chr10	79818005	.	C	CT	5483.70	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-13.041;DP=543;FS=2.032;HRun=8;HaplotypeScore=47.4484;InbreedingCoeff=0.9870;MQ=70.97;MQ0=0;MQRankSum=-2.197;QD=29.01;ReadPosRankSum=2.457;VQSLOD=5.1735;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:68.99:0,69,620	0/0:6,0:6:18.01:0,18,164	0/0:16,0:17:8.78:0,9,250	0/0:10,0:9:21.01:0,21,192	0/0:34,0:34:84.02:0,84,769	1/1:2,14:16:36.11:415,36,0	0/0:22,0:22:54.01:0,54,489	0/0:42,0:42:93.01:0,93,844	0/0:18,0:18:48.02:0,48,439	0/0:23,0:23:66.04:0,66,604	0/0:22,0:22:57.03:0,57,522	1/1:1,17:18:51.15:589,51,0	1/1:3,14:17:17.67:457,18,0	1/1:2,17:19:45.13:519,45,0	0/0:18,0:18:54.03:0,54,493	0/0:13,0:13:39.01:0,39,353	0/0:19,0:19:42.02:0,42,384	1/1:4,15:19:48.09:526,48,0	0/0:23,0:23:54.01:0,54,490	0/0:31,0:31:90.03:0,90,819	0/0:7,0:7:20.99:0,21,187	1/1:3,17:20:51.15:589,51,0	1/1:2,15:17:45.13:519,45,0	1/1:0,8:8:21.06:242,21,0	1/1:1,15:16:39.12:450,39,0	1/1:3,16:19:48.14:553,48,0	0/0:24,0:24:69.04:0,69,631	1/1:2,18:20:54.16:623,54,0
chr10	79818683	.	GGTTGA	G	237.19	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=3.217;DP=585;FS=3.464;HRun=0;HaplotypeScore=155.5180;InbreedingCoeff=0.6357;MQ=77.66;MQ0=1;MQRankSum=-4.040;QD=12.48;ReadPosRankSum=-1.443;VQSLOD=2.4818;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:15.05:319,15,0	0/0:9,0:9:27.09:0,27,846	0/0:11,0:11:33.07:0,33,874	0/0:26,0:24:60.12:0,60,1536	0/0:28,0:28:72.23:0,72,2136	0/0:26,0:26:63.19:0,63,1742	0/0:13,0:13:33.11:0,33,1014	0/0:21,0:21:63.21:0,63,1827	0/0:29,0:29:84.27:0,84,2494	0/0:26,0:26:78.26:0,78,2310	0/0:32,0:32:96.33:0,96,2859	0/0:26,0:26:72.23:0,72,2124	0/0:22,0:22:60.21:0,60,1798	0/0:33,0:33:90.30:0,90,2614	0/0:16,0:16:48.16:0,48,1480	0/0:22,0:22:66.21:0,66,1991	0/0:14,0:14:42.14:0,42,1315	0/0:10,0:10:27.09:0,27,812	0/0:14,0:14:42.14:0,42,1302	0/0:32,0:32:96.33:0,96,2978	0/0:16,0:16:45.14:0,45,1338	0/0:18,0:18:51.16:0,51,1418	0/0:18,0:18:51.17:0,51,1408	0/1:11,0:11:18.59:19,0,429	0/0:30,0:30:87.30:0,87,2575	0/0:24,0:24:69.24:0,69,2055	0/0:34,0:33:93.32:0,93,2907	0/0:16,0:16:48.16:0,48,1421
chr10	79818706	.	T	TATTCATTCATTCATTC	29231.90	PASS	AB=0.717;AC=23;AF=0.411;AN=56;BaseQRankSum=-2.403;DP=647;FS=2.633;HRun=0;HaplotypeScore=254.0163;InbreedingCoeff=0.9119;MQ=69.20;MQ0=1;MQRankSum=-16.333;QD=102.93;ReadPosRankSum=-1.919;VQSLOD=4.3113;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:18.06:1043,18,0	0/0:8,0:8:21.04:0,21,823	0/0:15,0:15:12.04:0,12,400	0/0:21,0:19:36.08:0,36,1116	0/0:26,0:27:66.23:0,66,2668	1/1:12,0:30:45.15:1879,45,0	0/0:17,0:17:39.12:0,39,1384	0/0:14,0:14:15.05:0,15,526	0/0:29,0:29:69.22:0,69,2935	0/0:28,0:28:57.20:0,57,2384	0/0:38,0:38:84.28:0,84,3319	1/1:14,13:28:48.16:3408,48,0	1/1:17,8:28:39.13:2810,39,0	1/1:17,14:34:60.21:4209,60,0	0/0:16,0:16:45.15:0,45,1874	0/0:26,0:26:51.14:0,51,1972	0/0:16,0:16:30.10:0,30,1141	1/1:13,0:13:24.08:929,24,0	0/0:17,0:17:30.09:0,30,1146	0/0:35,0:35:90.28:0,90,3604	0/0:13,0:13:33.10:0,33,1244	1/1:12,9:23:45.15:2835,45,0	1/1:14,7:22:33.11:2040,33,0	1/1:6,4:11:12.04:523,12,0	1/1:15,15:31:54.19:4073,54,0	0/1:20,13:33:61.36:4286,0,61	0/0:43,0:42:99:0,108,4518	1/1:13,4:17:18.06:1198,18,0
chr10	79819368	.	G	GGA	404.59	PASS	AB=1.000;AC=20;AF=0.385;AN=52;BaseQRankSum=-1.557;DP=426;FS=18.107;HRun=0;HaplotypeScore=75.5788;InbreedingCoeff=0.4610;MQ=66.01;MQ0=7;MQRankSum=0.626;QD=1.94;ReadPosRankSum=-0.982;VQSLOD=0.1261;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:2.97:10,3,0	1/1:4,0:4:5.99:49,6,0	./.	0/1:29,0:8:0:0,0,0	0/0:29,0:32:7.14:0,7,30	0/0:23,0:23:17.76:0,18,162	./.	0/1:31,0:31:0:0,0,0	0/1:9,0:9:0:0,0,0	0/0:15,0:16:13.77:0,14,62	0/1:23,0:23:0:0,0,0	0/0:13,0:13:3:0,3,32	0/0:9,0:11:5.85:0,6,46	0/0:11,0:11:3:0,3,32	0/0:10,0:12:8.23:0,8,41	0/0:8,0:13:8.31:0,8,42	0/0:11,0:13:5.34:0,5,45	1/1:10,0:10:9.88:87,10,0	0/0:19,0:19:2.80:0,3,31	0/1:15,0:15:0:1,0,0	0/1:8,0:8:0:0,0,0	0/1:8,0:8:0:0,0,0	0/0:6,0:6:3:0,3,29	0/1:11,0:11:14.08:14,0,26	1/1:11,0:11:3.01:41,3,0	1/1:15,9:24:27.56:274,28,0	0/0:20,0:21:17.77:0,18,173	1/1:4,4:8:5.98:64,6,0
chr10	79820198	.	A	AT	8493.61	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=17.570;DP=607;FS=12.058;HRun=1;HaplotypeScore=81.1119;InbreedingCoeff=0.9971;MQ=84.20;MQ0=0;MQRankSum=-3.826;QD=35.10;ReadPosRankSum=3.641;VQSLOD=4.0054;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:69.23:921,69,0	0/0:9,0:9:21.07:0,21,273	0/0:16,0:16:27.10:0,27,419	0/0:21,0:21:58.45:0,58,698	0/0:24,0:24:72.23:0,72,925	1/1:3,22:25:63.20:832,63,0	0/0:24,0:24:63.20:0,63,816	0/0:20,0:20:54.15:0,54,684	0/0:27,0:27:81.22:0,81,1033	0/0:28,0:28:84.27:0,84,1090	0/0:21,0:21:51.17:0,51,661	1/1:1,18:19:51.17:688,51,0	1/1:2,21:23:67.42:871,67,0	1/1:0,18:18:51.17:684,51,0	0/0:24,0:24:72.23:0,72,935	0/0:18,0:18:54.18:0,54,699	0/0:33,0:33:96.31:0,96,1246	1/1:1,12:13:36.56:464,37,0	0/0:30,0:30:87.28:0,87,1127	0/0:18,0:18:54.16:0,54,687	0/0:14,0:14:42.14:0,42,545	1/1:1,21:22:54.63:702,55,0	1/1:2,15:17:46.97:616,47,0	1/1:1,23:24:60.67:803,61,0	1/1:3,28:31:78.26:1046,78,0	1/1:0,17:17:51.15:668,51,0	0/0:38,0:38:99:0,111,1416	1/1:1,6:7:15.05:200,15,0
chr10	79820385	.	A	AGTGTGTGTGTGT	8063.98	PASS	AB=1.000;AC=21;AF=0.389;AN=54;BaseQRankSum=2.944;DP=650;FS=4.881;HRun=0;HaplotypeScore=241.9522;InbreedingCoeff=0.7164;MQ=64.55;MQ0=6;MQRankSum=-8.048;QD=30.90;ReadPosRankSum=-3.957;VQSLOD=3.6192;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:16:10.23:57,0,10	0/0:10,0:10:18.06:0,18,624	0/0:38,0:25:9.02:0,9,190	0/0:38,0:29:6.02:0,6,183	0/0:19,0:21:48.16:0,48,1537	1/1:30,0:30:25.05:556,25,0	0/0:25,0:26:30.10:0,30,1021	0/0:32,0:34:39.11:0,39,1040	0/0:20,0:22:36.59:0,37,1145	0/0:17,0:19:48.16:0,48,1618	0/0:15,0:15:29.92:0,30,891	1/1:18,0:18:18.06:758,18,0	1/1:18,4:24:24.79:1347,25,0	1/1:14,5:19:14.81:877,15,0	0/0:18,0:20:57.20:0,57,1937	0/0:23,0:23:42.14:0,42,1338	0/1:27,0:29:92.51:93,0,1228	1/1:11,0:11:9.03:354,9,0	0/0:18,0:18:33.11:0,33,1080	0/0:21,0:22:48.16:0,48,1591	0/0:30,0:30:60.18:0,60,1801	1/1:20,2:23:12.04:698,12,0	1/1:17,4:21:8.65:466,9,0	1/1:20,0:23:13.99:638,14,0	./.	0/1:34,0:31:99:1984,0,155	0/0:30,0:31:60.17:0,60,1766	1/1:10,0:10:18.01:237,18,0
chr10	79820594	.	GC	G	761.26	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.958;DP=531;FS=5.542;HRun=2;HaplotypeScore=57.5377;InbreedingCoeff=0.9791;MQ=77.31;MQ0=0;MQRankSum=-2.969;QD=29.28;ReadPosRankSum=2.816;VQSLOD=3.1076;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:66.21:856,66,0	0/0:5,0:5:15.05:0,15,225	0/0:19,0:19:54.13:0,54,673	0/0:10,0:10:27.08:0,27,361	0/0:30,0:30:72.03:0,72,1071	0/0:29,0:29:81.19:0,81,1164	0/0:7,0:7:21.07:0,21,315	0/0:27,0:27:78.26:0,78,1167	0/0:22,0:22:63.21:0,63,942	0/0:27,0:27:75.25:0,75,1089	0/0:22,0:22:63.21:0,63,943	0/0:11,0:11:33.11:0,33,494	0/0:18,0:18:54.14:0,54,779	0/0:16,0:16:45.15:0,45,673	0/0:17,0:16:48.15:0,48,699	0/0:13,0:13:39.13:0,39,585	0/0:14,0:14:42.14:0,42,629	0/0:13,0:13:39.11:0,39,563	0/0:20,0:20:54.04:0,54,779	0/0:34,0:34:99:0,102,1508	0/0:16,0:16:48.15:0,48,700	0/0:19,0:19:48.16:0,48,718	0/0:23,0:23:60.18:0,60,875	0/0:15,0:15:45.11:0,45,649	0/0:23,0:23:60.66:0,61,879	0/0:20,0:20:60.09:0,60,809	0/0:22,0:22:63.21:0,63,939	0/0:13,0:13:39.13:0,39,584
chr10	79820670	.	T	TTTTTTTGTTTG	2670.44	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.501;DP=587;FS=7.989;HRun=0;HaplotypeScore=187.5758;InbreedingCoeff=0.9977;MQ=73.95;MQ0=0;MQRankSum=-6.405;QD=89.01;ReadPosRankSum=-2.447;VQSLOD=2.6488;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:19,10:30:63.01:2765,63,0	0/0:10,0:10:27.09:0,27,780	0/0:25,0:25:55.63:0,56,1550	0/0:11,0:11:30.04:0,30,735	0/0:29,0:29:87.25:0,87,2476	0/0:24,0:24:69.21:0,69,2002	0/0:11,0:11:33.08:0,33,853	0/0:33,0:33:84.23:0,84,2213	0/0:16,0:16:45.11:0,45,1012	0/0:23,0:23:60.17:0,60,1702	0/0:25,0:25:75.24:0,75,2310	0/0:17,0:17:48.16:0,48,1442	0/0:23,0:23:66.21:0,66,2095	0/0:16,0:16:42.13:0,42,1274	0/0:21,0:21:63.16:0,63,1726	0/0:12,0:12:33.08:0,33,941	0/0:20,0:20:57.19:0,57,1753	0/0:14,0:14:39.09:0,39,1064	0/0:24,0:24:66.20:0,66,1728	0/0:39,0:39:99:0,117,3352	0/0:19,0:19:54.17:0,54,1556	0/0:21,0:20:54.13:0,54,1474	0/0:18,0:18:54.17:0,54,1532	0/0:16,0:16:42.03:0,42,1160	0/0:24,0:24:69.22:0,69,1835	0/0:19,0:19:51.16:0,51,1488	0/0:34,0:34:93.30:0,93,2677	0/0:13,0:13:39.13:0,39,1221
chr10	79820971	.	TCTC	T	9628.91	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.218;DP=615;FS=2.688;HRun=0;HaplotypeScore=87.7280;InbreedingCoeff=0.9968;MQ=86.46;MQ0=1;MQRankSum=-3.821;QD=42.23;ReadPosRankSum=3.939;VQSLOD=6.3970;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.18:0,60,1286	0/0:6,0:6:18.06:0,18,402	0/0:24,0:24:66.23:0,66,1361	0/0:20,0:20:41.73:0,42,775	0/0:40,0:40:99:0,117,2600	1/1:0,32:32:81.28:1322,81,0	0/0:14,0:14:36.12:0,36,770	0/0:40,0:40:99:0,105,2224	0/0:19,0:19:51.17:0,51,1066	0/0:25,0:25:72.25:0,72,1567	0/0:31,0:31:93.32:0,93,2059	1/1:2,18:20:54.18:881,54,0	1/1:0,20:20:48.16:784,48,0	1/1:1,26:27:72.25:1164,72,0	0/0:17,0:17:51.18:0,51,1119	0/0:22,0:21:63.22:0,63,1333	0/0:14,0:14:42.14:0,42,921	1/1:0,12:12:30.10:490,30,0	0/0:21,0:21:63.22:0,63,1335	0/0:27,0:27:78.27:0,78,1724	0/0:14,0:14:42.14:0,42,901	1/1:1,18:19:51.17:833,51,0	1/1:1,20:21:57.19:918,57,0	1/1:0,8:8:18.06:294,18,0	1/1:0,26:26:78.27:1262,78,0	1/1:1,31:32:26.24:1339,26,0	0/0:29,0:29:84.29:0,84,1844	1/1:1,10:11:21.07:343,21,0
chr10	79821034	.	G	GA	528	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.802;DP=618;FS=0.000;HRun=0;HaplotypeScore=78.3178;InbreedingCoeff=0.9960;MQ=88.27;MQ0=1;MQRankSum=-2.695;QD=37.71;ReadPosRankSum=2.212;VQSLOD=3.8809;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:39.13:623,39,0	0/0:8,0:8:24.08:0,24,336	0/0:19,0:19:57.18:0,57,772	0/0:25,0:25:69.14:0,69,857	0/0:38,0:38:99:0,114,1565	0/0:35,0:35:99:0,99,1383	0/0:10,0:10:30.08:0,30,400	0/0:25,0:25:75.24:0,75,1020	0/0:22,0:22:66.22:0,66,923	0/0:28,0:28:78.20:0,78,1091	0/0:36,0:36:99:0,105,1448	0/0:22,0:22:63.20:0,63,862	0/0:21,0:21:54.15:0,54,733	0/0:21,0:21:60.11:0,60,748	0/0:18,0:18:51.16:0,51,695	0/0:22,0:21:63.21:0,63,881	0/0:15,0:15:45.15:0,45,629	0/0:11,0:11:30.10:0,30,418	0/0:22,0:22:66.22:0,66,922	0/0:43,0:43:99:0,123,1719	0/0:17,0:17:51.15:0,51,695	0/0:11,0:11:33.04:0,33,437	0/0:26,0:26:75.24:0,75,1029	0/0:13,0:13:36.12:0,36,503	0/0:26,0:26:78.25:0,78,1075	0/0:36,0:36:99:0,108,1509	0/0:24,0:24:69.23:0,69,965	0/0:10,0:10:30.10:0,30,419
chr10	79822724	.	T	TA	4279.30	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-10.216;DP=546;FS=3.389;HRun=7;HaplotypeScore=53.5072;InbreedingCoeff=0.9805;MQ=72.65;MQ0=0;MQRankSum=-0.048;QD=28.34;ReadPosRankSum=0.449;VQSLOD=5.4823;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.10:0,69,661	0/0:15,0:15:36.05:0,36,348	0/0:12,0:11:14.80:0,15,123	0/0:8,0:8:14.99:0,15,138	0/0:31,0:31:87.06:0,87,828	0/0:17,0:17:39.06:0,39,376	0/0:14,0:14:39.05:0,39,370	0/0:42,0:42:99:0,101,963	0/0:10,0:10:27.04:0,27,261	0/0:21,0:21:54.06:0,54,515	0/0:26,0:26:60.08:0,60,579	1/1:2,14:17:38.99:449,39,0	1/1:4,13:17:42.11:494,42,0	1/1:1,15:16:36.11:435,36,0	0/0:16,0:16:48.08:0,48,463	0/0:22,0:22:63.08:0,63,599	0/0:22,0:22:54.08:0,54,521	1/1:2,5:7:9.03:109,9,0	0/0:21,0:21:60.08:0,60,573	0/0:25,0:25:54.07:0,54,520	0/0:15,0:15:42.06:0,42,405	1/1:2,22:24:57.09:669,57,0	1/1:4,25:29:75.22:893,75,0	1/1:1,9:10:27.08:326,27,0	0/0:27,0:27:78.10:0,78,744	1/1:4,22:26:66.15:759,66,0	0/0:25,0:25:75.10:0,75,718	1/1:0,5:5:12.04:145,12,0
chr10	79823116	.	ATGGTAT	A	1342.18	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.819;DP=653;FS=1.859;HRun=0;HaplotypeScore=146.2121;InbreedingCoeff=0.9988;MQ=84.60;MQ0=0;MQRankSum=-7.517;QD=51.62;ReadPosRankSum=2.137;VQSLOD=3.4834;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.26:0,75,2620	0/0:14,0:14:39.13:0,39,1311	0/0:19,0:19:51.17:0,51,1684	0/0:22,0:22:63.22:0,63,2124	0/0:28,0:28:78.27:0,78,2733	1/1:1,25:26:60.20:1437,60,0	0/0:28,0:28:81.23:0,81,2633	0/0:32,0:32:96.32:0,96,3260	0/0:18,0:18:54.19:0,54,1974	0/0:40,0:40:99:0,120,4084	0/0:27,0:27:81.28:0,81,2907	0/0:30,0:30:84.29:0,84,2859	0/0:20,0:20:57.20:0,57,2022	0/0:24,0:24:69.24:0,69,2529	0/0:30,0:30:84.28:0,84,2809	0/0:17,0:17:51.18:0,51,1811	0/0:14,0:14:39.13:0,39,1267	0/0:14,0:14:39.13:0,39,1349	0/0:18,0:18:51.14:0,51,1732	0/0:40,0:40:99:0,120,4354	0/0:27,0:27:78.27:0,78,2668	0/0:20,0:20:60.21:0,60,2002	0/0:25,0:25:72.25:0,72,2632	0/0:16,0:16:45.15:0,45,1589	0/0:30,0:30:87.30:0,87,3145	0/0:15,0:15:45.15:0,45,1582	0/0:25,0:25:75.26:0,75,2660	0/0:9,0:9:27.09:0,27,989
chr10	79825185	.	TCA	T	876.75	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.050;DP=704;FS=1.715;HRun=0;HaplotypeScore=80.8807;InbreedingCoeff=0.9337;MQ=63.99;MQ0=1;MQRankSum=-1.576;QD=33.72;ReadPosRankSum=1.477;VQSLOD=5.8469;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:25:66.22:972,66,0	0/0:9,0:9:24.08:0,24,450	0/0:15,0:13:32.96:0,33,522	0/0:9,1:9:8.20:0,8,256	0/0:27,0:27:78.27:0,78,1461	0/0:35,0:35:99:0,102,1884	0/0:21,0:21:60.21:0,60,1116	0/0:41,0:41:99:0,114,2096	0/0:23,0:23:69.24:0,69,1279	0/0:26,0:26:75.26:0,75,1403	0/0:22,0:22:66.23:0,66,1236	0/0:29,0:29:87.30:0,87,1630	0/0:28,0:28:81.28:0,81,1506	0/0:17,0:17:51.17:0,51,934	0/0:37,0:37:99:0,111,2069	0/0:21,0:21:60.18:0,60,1091	0/0:30,0:30:84.29:0,84,1539	0/0:32,0:32:96.33:0,96,1714	0/0:12,0:12:36.12:0,36,674	0/0:28,0:28:78.27:0,78,1456	0/0:23,0:23:66.23:0,66,1215	0/0:32,0:32:90.31:0,90,1677	0/0:22,0:22:66.23:0,66,1223	0/0:25,0:25:69.21:0,69,1247	0/0:28,0:28:81.28:0,81,1507	0/0:37,0:37:99:0,99,1821	0/0:36,0:36:99:0,102,1888	0/0:12,0:12:36.11:0,36,624
chr10	79827638	.	AGTGTGCGTGCGTGTGTGTGTGT	A	2148.02	PASS	AB=0.528;AC=3;AF=0.054;AN=56;BaseQRankSum=7.475;DP=668;FS=0.000;HRun=0;HaplotypeScore=331.6920;InbreedingCoeff=0.6359;MQ=51.47;MQ0=21;MQRankSum=-3.379;QD=63.18;ReadPosRankSum=-1.295;VQSLOD=2.1415;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:28.60:0,29,795	0/0:11,0:11:23.88:0,24,1234	0/0:46,0:11:23.06:0,23,488	0/0:50,0:12:24.08:0,24,648	0/0:29,0:28:72.16:0,72,4267	0/0:22,0:22:17.87:0,18,383	0/0:23,0:23:54.10:0,54,2777	0/0:39,0:39:99:0,105,2437	0/0:21,0:21:60.21:0,60,4173	0/0:20,0:20:54.19:0,54,3367	0/0:16,0:16:42.96:0,43,2479	0/0:21,0:21:48.13:0,48,2151	0/0:23,0:23:57.18:0,57,2385	0/0:22,0:22:48.57:0,49,2098	0/0:19,0:19:48.16:0,48,2906	0/0:16,0:15:42.14:0,42,3142	0/0:29,0:29:78.26:0,78,4400	0/0:12,0:12:24.08:0,24,1257	0/0:14,0:14:42.07:0,42,1630	0/0:24,0:24:60.64:0,61,3942	0/0:33,0:32:72.25:0,72,3499	0/0:24,0:24:59.68:0,60,2451	0/0:21,0:21:36.09:0,36,975	0/0:29,0:29:63.69:0,64,3470	0/0:29,0:28:36.38:0,36,1324	0/1:2,17:19:35.39:1299,0,35	0/0:14,0:14:35.91:0,36,901	1/1:1,14:15:21.07:954,21,0
chr10	79827648	.	CGTGT	C	1555.10	PASS	AB=0.941;AC=22;AF=0.407;AN=54;BaseQRankSum=5.414;DP=677;FS=2.958;HRun=0;HaplotypeScore=145.7770;InbreedingCoeff=0.5722;MQ=51.15;MQ0=23;MQRankSum=-1.532;QD=5.15;ReadPosRankSum=2.573;VQSLOD=2.7678;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:30:1.55:4,2,0	0/0:12,0:12:14.75:0,15,222	./.	0/0:38,0:8:0:0,0,0	0/0:27,0:26:38.98:0,39,763	1/1:8,0:19:10.72:102,11,0	0/0:29,0:29:41.56:0,42,668	0/0:38,0:38:23.98:0,24,211	0/0:23,0:22:45.14:0,45,947	0/0:21,0:21:32.84:0,33,628	0/0:16,0:16:24.05:0,24,470	1/1:13,9:21:12.01:189,12,0	1/1:15,4:20:9.49:123,9,0	1/1:14,10:25:18.05:262,18,0	0/0:18,0:19:20.67:0,21,287	0/0:17,0:17:30.08:0,30,596	0/0:27,0:30:26.24:0,26,411	0/1:6,0:8:4.80:5,0,146	0/0:19,0:18:13.11:0,13,137	0/0:28,1:28:3.64:0,4,761	0/1:32,2:33:54.43:54,0,405	1/1:16,6:24:11.59:311,12,0	1/1:12,8:20:5.92:94,6,0	1/1:20,12:32:19.16:414,19,0	1/1:19,0:29:5.56:35,6,0	0/1:19,0:20:56.07:56,0,111	0/0:16,0:15:12.21:0,12,126	0/1:16,0:16:11.05:91,0,11
chr10	79829128	.	G	GA	5059.76	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=0.573;DP=472;FS=1.259;HRun=7;HaplotypeScore=82.1232;InbreedingCoeff=0.9659;MQ=83.14;MQ0=3;MQRankSum=-4.818;QD=27.80;ReadPosRankSum=2.603;VQSLOD=5.5211;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,28:34:78.16:909,78,0	0/0:11,0:11:27.04:0,27,261	0/0:32,0:23:45.09:0,45,504	0/0:26,0:22:16.86:0,17,321	0/0:9,0:9:27.04:0,27,261	1/1:2,11:13:27.55:327,28,0	0/0:16,0:16:42.01:0,42,396	0/0:23,0:23:57.09:0,57,550	0/0:20,0:20:51.08:0,51,492	0/0:13,0:13:33.05:0,33,320	0/0:16,0:16:45.07:0,45,434	1/1:0,14:14:42.13:506,42,0	1/1:3,14:17:45.14:541,45,0	1/1:4,18:22:52.05:595,52,0	0/0:22,0:22:51.07:0,51,493	0/0:14,0:14:39.06:0,39,376	0/0:12,0:12:27.04:0,27,261	0/0:5,0:5:9.01:0,9,87	0/0:15,0:15:30.03:0,30,282	0/0:19,0:19:48.04:0,48,451	0/0:17,0:17:41.94:0,42,398	1/1:4,16:20:49.35:562,49,0	1/1:2,14:16:33.10:391,33,0	1/1:4,23:27:60.18:719,60,0	1/1:2,10:12:30:329,30,0	1/1:2,2:4:6.02:72,6,0	0/0:19,0:19:54.07:0,54,515	1/1:0,3:3:9.03:109,9,0
chr10	79829155	.	CCACA	C	1479.91	PASS	AB=1.000;AC=16;AF=0.320;AN=50;BaseQRankSum=5.329;DP=455;FS=4.631;HRun=0;HaplotypeScore=99.9912;InbreedingCoeff=0.7223;MQ=58.25;MQ0=47;MQRankSum=-0.726;QD=10.72;ReadPosRankSum=0.987;VQSLOD=2.8734;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:20:2.37:0,2,8	0/0:11,0:12:29.80:0,30,386	./.	./.	0/0:17,0:14:18.03:0,18,320	0/0:12,0:11:11.99:0,12,160	0/0:23,0:21:24.02:0,24,349	0/0:26,0:22:11.26:0,11,80	0/0:17,0:14:22.63:0,23,441	0/1:11,0:10:24.07:24,0,162	0/0:16,0:16:23.39:0,23,322	1/1:13,0:14:17.72:246,18,0	1/1:12,3:15:20.97:227,21,0	1/1:15,2:18:24.02:311,24,0	0/0:18,0:18:11.97:0,12,162	0/0:10,0:10:17.77:0,18,255	0/1:14,0:12:3.43:3,0,286	0/0:8,0:8:15:0,15,217	0/0:13,0:10:8.97:0,9,75	0/0:16,0:18:21.04:0,21,311	0/0:29,0:19:14.64:0,15,247	1/1:18,0:18:18.94:264,19,0	1/1:15,1:16:18.05:257,18,0	1/1:14,2:17:21:257,21,0	1/1:10,2:11:5.59:71,6,0	0/0:6,0:1:1.82:0,2,5	0/0:12,0:12:11.40:0,11,162	./.
chr10	79829212	.	AAG	A	224.90	PASS	AB=0.978;AC=7;AF=0.125;AN=56;BaseQRankSum=4.729;DP=444;FS=2.869;HRun=0;HaplotypeScore=79.4682;InbreedingCoeff=0.2433;MQ=54.25;MQ0=14;MQRankSum=1.393;QD=2.59;ReadPosRankSum=-0.062;VQSLOD=1.8994;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:7:5.93:0,6,41	0/1:7,1:8:18.36:18,0,190	0/0:11,0:5:15.03:0,15,201	0/1:14,0:7:0.36:0,0,137	0/1:17,0:15:3.19:3,0,411	0/0:10,0:11:5.92:0,6,40	0/0:16,0:14:15.05:0,15,233	0/0:19,0:18:33.02:0,33,467	0/0:20,0:19:35.86:0,36,458	0/0:21,0:21:22.76:0,23,629	0/0:14,0:14:26.87:0,27,381	0/0:13,0:13:33.09:0,33,456	0/0:15,0:16:27.47:0,27,490	0/0:15,0:15:27.08:0,27,393	0/0:11,0:11:18.05:0,18,249	0/1:10,0:9:15.34:15,0,239	0/0:13,0:11:24.48:0,24,321	0/0:17,0:16:34.34:0,34,506	0/0:15,0:11:24.07:0,24,342	0/1:15,0:15:3.23:3,0,429	0/0:29,0:28:20.76:0,21,766	0/0:21,0:21:14.93:0,15,730	0/0:21,0:21:48.12:0,48,737	0/0:33,0:33:44.85:0,45,1148	1/1:20,3:23:36.99:301,37,0	0/0:9,0:7:3.95:0,4,50	0/0:17,0:16:38.83:0,39,506	0/0:5,0:5:0:0,0,0
chr10	79830170	.	CT	C	423.99	PASS	AB=0.970;AC=6;AF=0.107;AN=56;BaseQRankSum=8.614;DP=581;FS=6.013;HRun=10;HaplotypeScore=75.7581;InbreedingCoeff=0.2283;MQ=57.78;MQ0=3;MQRankSum=-2.685;QD=4.12;ReadPosRankSum=1.897;VQSLOD=0.5260;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:19:2.54:0,3,78	0/0:11,0:11:30.08:0,30,332	0/1:19,3:15:18.57:19,0,226	0/0:13,0:3:6.01:0,6,64	0/0:35,0:36:92.81:0,93,983	0/1:24,0:22:6.17:6,0,52	0/0:12,0:13:32.90:0,33,329	0/0:36,2:38:26.12:0,26,735	0/0:21,0:21:60.16:0,60,663	0/0:25,1:27:42.96:0,43,684	0/0:19,0:19:42.11:0,42,465	0/0:17,0:16:33.08:0,33,356	0/0:17,0:18:50.91:0,51,521	0/0:17,1:18:19.06:0,19,429	0/0:17,0:17:42.10:0,42,456	0/0:11,0:11:30.05:0,30,319	0/0:20,1:21:28.28:0,28,529	0/0:21,0:21:36.08:0,36,387	0/0:18,0:15:33.07:0,33,350	0/0:23,2:25:11.02:0,11,563	0/0:13,0:13:39.11:0,39,430	0/0:27,0:29:72.03:0,72,776	0/0:22,0:24:49.16:0,49,574	0/0:14,0:14:42.07:0,42,451	1/1:4,21:25:56.97:495,57,0	0/1:20,0:16:18.20:18,0,62	0/0:29,0:28:75.19:0,75,821	0/1:12,0:12:10.02:10,0,35
chr10	79830178	.	TTTGTTG	T	899.08	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=10.080;DP=566;FS=10.548;HRun=0;HaplotypeScore=127.2656;InbreedingCoeff=0.8402;MQ=58.00;MQ0=2;MQRankSum=-2.968;QD=10.83;ReadPosRankSum=2.087;VQSLOD=2.0326;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,10:18:26.61:493,27,0	0/0:11,0:11:33.11:0,33,1090	0/0:21,0:15:42.14:0,42,1034	0/0:14,0:4:12.04:0,12,280	0/0:37,0:37:96.25:0,96,2771	1/1:24,0:22:37.15:218,37,0	0/0:12,0:11:36.12:0,36,1164	0/0:31,0:31:84.09:0,84,2242	0/0:23,0:23:69.20:0,69,2023	0/0:27,0:27:75.21:0,75,2261	0/0:19,0:19:47.96:0,48,1512	0/0:15,0:14:39.09:0,39,1041	0/0:18,0:18:48.15:0,48,1466	0/0:16,0:16:45.15:0,45,1411	0/0:15,0:15:39.13:0,39,1280	0/0:10,0:10:27.08:0,27,833	0/0:22,0:22:63.16:0,63,1741	0/0:17,0:17:42.03:0,42,1148	0/0:15,0:13:33.11:0,33,1043	0/0:27,0:27:75.24:0,75,2161	0/0:14,0:14:36.12:0,36,1128	0/0:29,0:29:69.24:0,69,2238	0/0:22,0:22:55.89:0,56,1790	0/0:14,0:14:39.13:0,39,1310	0/0:24,0:24:63.22:0,63,1370	1/1:23,0:19:15.49:245,15,0	0/0:30,0:29:81.24:0,81,2427	0/1:14,0:14:9.63:91,0,10
chr10	79830180	.	TGTTG	T	1987.89	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.091;DP=551;FS=7.020;HRun=0;HaplotypeScore=99.9006;InbreedingCoeff=0.9809;MQ=59.08;MQ0=2;MQRankSum=-4.201;QD=25.16;ReadPosRankSum=0.706;VQSLOD=2.7527;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:15:15.80:298,16,0	0/0:12,0:12:36.12:0,36,899	0/0:20,0:16:45.14:0,45,930	0/0:13,0:6:17.65:0,18,255	0/0:36,0:36:92.09:0,92,2274	1/1:1,23:23:41.51:807,42,0	0/0:12,0:11:36.12:0,36,891	0/0:29,0:29:78.56:0,79,1883	0/0:24,0:24:72.25:0,72,1687	0/0:26,0:26:75.24:0,75,1822	0/0:17,0:17:48.16:0,48,1179	0/0:14,0:14:39.13:0,39,870	0/0:17,0:17:51.15:0,51,1166	0/0:16,0:16:45.13:0,45,1111	0/0:14,0:14:39.13:0,39,1000	0/0:10,0:10:27.07:0,27,670	0/0:22,0:22:66.22:0,66,1457	0/0:17,0:17:10.25:0,10,906	0/0:15,0:14:42.11:0,42,926	0/0:28,0:28:81.25:0,81,1788	0/0:15,0:15:45.11:0,45,992	0/0:25,0:25:75.22:0,75,1773	0/0:22,0:22:49.86:0,50,1402	0/0:13,0:13:39.13:0,39,1015	0/0:23,0:23:63.22:0,63,1163	1/1:2,8:18:46.95:591,47,0	0/0:29,0:28:84.28:0,84,1977	1/1:4,0:14:32.80:451,33,0
chr10	79830182	.	TTG	T	851.80	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.897;DP=551;FS=11.306;HRun=0;HaplotypeScore=82.5081;InbreedingCoeff=0.9617;MQ=59.05;MQ0=2;MQRankSum=-2.877;QD=10.78;ReadPosRankSum=1.850;VQSLOD=2.7015;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:15:8.31:122,8,0	0/0:13,0:13:39.13:0,39,729	0/0:21,0:17:48.16:0,48,854	0/0:15,0:6:11.51:0,12,270	0/0:36,0:36:96.31:0,96,1733	1/1:24,0:23:38.80:257,39,0	0/0:12,0:11:36.12:0,36,693	0/0:29,0:29:87.25:0,87,1511	0/0:24,0:24:72.25:0,72,1340	0/0:26,0:26:75.26:0,75,1404	0/0:18,0:18:51.17:0,51,957	0/0:14,0:14:39.13:0,39,724	0/0:16,0:16:48.15:0,48,887	0/0:15,0:15:45.15:0,45,863	0/0:14,0:14:39.13:0,39,752	0/0:10,0:10:27.09:0,27,500	0/0:23,0:23:69.19:0,69,1205	0/0:19,0:19:13.38:0,13,791	0/0:14,0:13:39.13:0,39,745	0/0:29,0:29:81.28:0,81,1484	0/0:13,0:13:39.13:0,39,747	0/0:23,0:23:69.24:0,69,1322	0/0:22,0:22:54.06:0,54,1125	0/0:13,0:13:39.13:0,39,753	0/0:22,0:22:63.22:0,63,1185	1/1:10,12:18:31.64:322,32,0	0/0:31,0:30:87.30:0,87,1600	1/1:5,9:14:17.06:305,17,0
chr10	79831393	.	C	CA	928.17	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.630;DP=481;FS=3.008;HRun=9;HaplotypeScore=49.6774;InbreedingCoeff=0.8818;MQ=68.90;MQ0=1;MQRankSum=0.292;QD=20.18;ReadPosRankSum=-0.721;VQSLOD=3.6806;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:19:17.14:389,17,0	0/0:7,0:7:18:0,18,156	0/0:24,0:17:11:0,11,153	0/0:12,0:9:3.05:0,3,69	0/0:30,1:31:47.79:0,48,644	0/0:7,0:8:23.02:0,23,185	0/0:6,2:8:18:0,18,156	0/0:26,0:26:62.92:0,63,538	0/0:12,0:12:35.99:0,36,312	0/0:22,0:22:56.98:0,57,492	0/0:19,0:19:47.90:0,48,403	0/0:10,0:10:26.98:0,27,231	0/0:15,0:15:38.96:0,39,334	0/0:12,0:12:32.99:0,33,286	0/0:20,0:20:56.95:0,57,487	0/0:11,0:11:29.97:0,30,255	0/0:23,0:22:25.06:0,25,341	0/0:14,0:14:38.99:0,39,339	0/0:19,0:17:41.94:0,42,357	0/0:21,0:21:53.99:0,54,468	0/0:7,0:7:21:0,21,182	0/0:16,0:16:44.99:0,45,390	0/0:26,0:26:68.97:0,69,599	0/0:7,0:7:21:0,21,182	1/1:2,24:27:56.21:658,56,0	0/0:27,0:27:68.96:0,69,597	0/0:25,1:26:38.69:0,39,552	0/0:11,0:11:32.99:0,33,286
chr10	79832372	.	C	CAA	2549.86	PASS	AB=0.800;AC=17;AF=0.304;AN=56;BaseQRankSum=-0.028;DP=527;FS=1.898;HRun=11;HaplotypeScore=75.9341;InbreedingCoeff=0.7277;MQ=72.26;MQ0=1;MQRankSum=-1.052;QD=15.55;ReadPosRankSum=-0.033;VQSLOD=2.3904;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:15:24.68:0,25,106	0/0:7,0:8:23.78:0,24,216	0/0:15,0:14:5.45:0,5,81	0/1:11,0:9:14.92:15,0,59	1/1:2,0:28:35.09:210,35,0	0/0:2,0:24:49.30:0,49,206	0/0:22,0:23:56.80:0,57,536	0/0:30,0:31:59.69:0,60,552	0/0:24,0:25:62.79:0,63,594	0/0:25,0:26:48.75:0,49,566	0/0:23,0:26:53.39:0,53,539	1/1:5,12:16:20.87:304,21,0	0/1:2,11:14:5.10:398,0,5	1/1:3,8:12:14.49:159,14,0	0/0:18,0:19:38.95:0,39,416	0/1:10,1:11:13.44:13,0,220	0/0:15,0:15:42.03:0,42,402	0/0:8,0:8:20.60:0,21,178	0/0:13,0:15:20.66:0,21,236	0/0:22,0:24:56.79:0,57,536	0/0:12,0:12:30.04:0,30,290	1/1:3,13:17:35.61:486,36,0	1/1:3,16:22:15.49:521,15,0	1/1:3,10:17:5.34:289,5,0	1/1:2,2:14:33.07:350,33,0	0/0:26,0:28:68.55:0,69,630	0/0:23,0:23:63.08:0,63,605	0/0:20,0:26:29.48:0,29,522
chr10	79832622	.	GTTGTTCTTCTTCTTCTTC	G	450.28	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=2.704;DP=539;FS=9.225;HRun=0;HaplotypeScore=250.8159;InbreedingCoeff=0.2869;MQ=50.37;MQ0=15;MQRankSum=-3.140;QD=10.47;ReadPosRankSum=-1.345;VQSLOD=1.0696;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:20.31:289,0,20	0/0:3,0:3:9.01:0,9,498	0/0:12,0:7:8.53:0,9,85	0/0:12,0:8:10.96:0,11,111	0/0:14,0:13:39.08:0,39,1465	0/1:8,0:8:99:110,0,144	0/0:19,0:17:42.03:0,42,976	0/0:36,0:20:53.88:0,54,753	0/0:22,0:22:59.43:0,59,1222	0/0:20,0:19:53.69:0,54,2084	0/0:16,0:14:35.61:0,36,1007	0/0:21,0:20:47.79:0,48,1424	0/0:11,0:10:27.01:0,27,916	0/0:22,0:22:62.81:0,63,2059	0/0:16,0:16:20.92:0,21,395	0/0:16,0:16:42.01:0,42,1368	0/0:32,0:32:89.06:0,89,2628	0/0:21,0:21:52.27:0,52,1604	0/0:26,0:20:48.04:0,48,1454	0/0:21,0:21:32.69:0,33,1673	0/0:22,0:22:42.96:0,43,1695	0/0:9,0:9:23.96:0,24,598	0/0:12,0:11:29.91:0,30,1166	0/0:39,0:38:99:0,102,2740	1/1:0,9:9:3.01:154,3,0	0/0:22,0:22:62.98:0,63,1372	0/0:33,0:33:92.84:0,93,3152	0/0:19,0:18:45.02:0,45,894
chr10	79832625	.	GTTC	G	1200.30	PASS	AB=1.000;AC=21;AF=0.404;AN=52;BaseQRankSum=2.607;DP=531;FS=19.846;HRun=0;HaplotypeScore=101.6976;InbreedingCoeff=0.5862;MQ=50.20;MQ0=16;MQRankSum=1.234;QD=5.69;ReadPosRankSum=-1.115;VQSLOD=0.4972;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:14.68:101,15,0	0/0:3,0:3:6.01:0,6,83	./.	./.	0/0:14,0:13:14.02:0,14,230	1/1:8,0:8:6.27:46,6,0	0/0:20,0:18:17.98:0,18,152	0/0:34,0:19:11.83:0,12,78	0/0:23,0:23:8.89:0,9,73	0/0:21,0:20:5.22:0,5,332	0/0:14,0:13:12.03:0,12,180	0/1:20,0:19:41.21:112,0,41	1/1:11,0:10:8.18:67,8,0	1/1:24,0:24:4.28:203,4,0	1/1:6,9:15:6.02:79,6,0	0/0:15,0:15:17.98:0,18,210	0/0:30,0:30:35.92:0,36,399	0/0:22,0:22:20.96:0,21,245	0/0:26,0:19:21:0,21,226	0/0:21,0:21:23.92:0,24,277	0/0:24,0:24:23.21:0,23,205	1/1:9,0:9:5.99:48,6,0	0/1:12,0:11:51.56:53,0,52	0/1:39,0:38:54.31:170,0,54	1/1:9,0:9:2.98:21,3,0	1/1:17,3:20:27.03:297,27,0	0/0:31,0:31:48.34:0,48,421	1/1:19,0:18:23.93:186,24,0
chr10	79832656	.	TTC	T	36.04	PASS	AB=0.910;AC=5;AF=0.089;AN=56;BaseQRankSum=5.796;DP=484;FS=9.792;HRun=0;HaplotypeScore=88.8959;InbreedingCoeff=0.1255;MQ=48.57;MQ0=23;MQRankSum=-1.959;QD=0.48;ReadPosRankSum=-1.516;VQSLOD=0.8183;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,1:17:30.11:30,0,246	0/0:3,0:3:9.03:0,9,152	0/0:29,0:3:6.02:0,6,74	0/1:37,0:8:31.85:32,0,153	0/0:15,0:14:42.12:0,42,620	0/1:8,3:11:72.69:73,0,166	0/0:22,0:20:48.16:0,48,710	0/0:39,0:27:72.22:0,72,965	0/0:13,0:13:33.11:0,33,453	0/0:17,0:16:38.87:0,39,642	0/0:11,0:9:24.08:0,24,360	0/0:15,0:15:37.91:0,38,392	0/0:13,0:12:9.24:0,9,297	0/0:20,0:20:49.03:0,49,416	0/0:12,0:12:6.46:0,6,106	0/0:12,0:12:36.12:0,36,563	0/0:18,0:18:48.16:0,48,824	0/0:19,0:19:48.16:0,48,747	0/0:17,0:15:38.61:0,39,592	0/0:14,0:14:36.12:0,36,570	0/0:17,0:17:48.16:0,48,736	0/0:12,0:11:23.65:0,24,248	0/0:11,0:11:29.59:0,30,344	0/0:25,0:25:60.21:0,60,667	1/1:8,0:8:1.82:5,2,0	0/0:13,0:13:12.28:0,12,130	0/0:23,0:23:66.22:0,66,1116	0/0:18,0:16:37.02:0,37,259
chr10	79832690	.	TTCC	T	220.54	PASS	AB=0.800;AC=3;AF=0.056;AN=54;BaseQRankSum=6.252;DP=473;FS=2.637;HRun=0;HaplotypeScore=85.9235;InbreedingCoeff=0.5343;MQ=52.28;MQ0=19;MQRankSum=-4.346;QD=10.50;ReadPosRankSum=-2.593;VQSLOD=2.3414;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,2:13:8.85:141,9,0	0/0:6,0:6:18.05:0,18,348	0/0:51,0:14:38.58:0,39,552	0/0:54,0:14:8.03:0,8,328	0/0:14,0:14:36.11:0,36,675	0/1:6,2:8:9.41:176,0,9	0/0:21,0:21:54.17:0,54,997	0/0:30,0:25:69.20:0,69,1077	0/0:12,0:12:31.24:0,31,602	0/0:15,0:14:39.13:0,39,741	0/0:8,0:8:18.06:0,18,373	0/0:14,0:13:36.05:0,36,676	0/0:12,0:11:30.07:0,30,517	0/0:16,0:16:39.11:0,39,646	0/0:11,0:11:15.05:0,15,343	0/0:15,0:12:33.10:0,33,635	0/0:15,0:13:36.12:0,36,732	0/0:19,0:18:21.99:0,22,774	0/0:18,0:17:48.14:0,48,757	0/0:9,0:8:21.07:0,21,454	0/0:19,0:19:54.15:0,54,1006	0/0:15,0:13:23.95:0,24,450	0/0:10,0:10:9.50:0,10,184	0/0:18,0:17:6.30:0,6,484	./.	0/0:10,0:9:27.09:0,27,525	0/0:19,0:19:51.15:0,51,896	0/0:16,0:15:42.14:0,42,824
chr10	79832956	.	T	TC	202.47	PASS	AB=0.813;AC=16;AF=0.667;AN=24;BaseQRankSum=-2.152;DP=32;FS=9.650;HRun=1;HaplotypeScore=23.1429;InbreedingCoeff=0.1756;MQ=93.83;MQ0=0;MQRankSum=-1.586;QD=8.44;ReadPosRankSum=-1.473;VQSLOD=-0.5361;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:3.01:40,3,0	./.	0/0:3,0:3:2.46:0,2,29	0/1:7,3:8:38.49:72,0,38	./.	0/0:1,0:1:1.25:0,1,3	1/1:1,0:1:3.01:39,3,0	0/1:1,0:1:0:0,0,0	./.	1/1:1,0:1:3:25,3,0	./.	./.	./.	./.	./.	./.	1/1:2,0:2:5.96:44,6,0	./.	./.	./.	0/1:0,2:2:0:0,0,0	./.	0/1:2,0:2:0:0,0,0	1/1:0,1:1:3.01:40,3,0	./.	./.	1/1:1,0:1:3:25,3,0	./.
chr10	79833621	.	G	GT	3095	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-9.088;DP=598;FS=11.062;HRun=9;HaplotypeScore=67.0832;InbreedingCoeff=0.9858;MQ=68.79;MQ0=0;MQRankSum=1.507;QD=22.43;ReadPosRankSum=0.856;VQSLOD=3.9560;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,102,885	0/0:14,0:14:35.96:0,36,309	0/0:14,0:14:15.49:0,15,171	0/0:16,0:16:10.66:0,11,192	0/0:32,0:32:79.67:0,80,667	0/0:23,0:23:59.96:0,60,516	0/0:14,0:14:40.79:0,41,340	0/0:23,0:23:59.91:0,60,510	0/0:14,0:14:30.45:0,30,261	0/0:25,0:26:59.02:0,59,501	0/0:19,0:19:47.96:0,48,416	1/1:5,10:15:27.07:299,27,0	1/1:0,11:11:30.08:332,30,0	1/1:4,25:29:72.19:796,72,0	0/0:20,0:20:53.94:0,54,462	0/0:12,0:12:32.99:0,33,286	0/0:26,0:26:65.98:0,66,573	0/0:17,0:17:38.95:0,39,334	0/0:23,0:23:47.62:0,48,394	0/0:29,0:29:77.97:0,78,677	0/0:31,0:31:89.88:0,90,771	1/1:0,15:15:42.07:451,42,0	1/1:2,17:20:18.73:400,19,0	1/1:6,22:28:57.15:630,57,0	1/1:7,13:20:15.97:384,16,0	0/0:28,0:28:74.94:0,75,643	0/0:23,0:23:62.98:0,63,547	0/0:15,0:15:35.98:0,36,313
chr10	79833707	.	G	GT	1074.03	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-4.576;DP=468;FS=1.255;HRun=9;HaplotypeScore=53.3302;InbreedingCoeff=0.9385;MQ=75.35;MQ0=0;MQRankSum=-0.460;QD=17.32;ReadPosRankSum=1.890;VQSLOD=3.7564;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,21:27:57.15:625,57,0	0/0:9,0:9:23.98:0,24,204	0/0:10,0:10:17.96:0,18,149	0/0:10,0:10:17.94:0,18,145	0/0:23,0:24:55.70:0,56,474	1/1:2,20:22:48.13:531,48,0	0/0:17,0:17:35.95:0,36,313	0/0:19,0:19:38.98:0,39,338	0/0:11,0:11:32.99:0,33,286	0/0:23,0:23:53.96:0,54,464	0/0:19,0:19:47.99:0,48,416	0/0:13,0:13:29.99:0,30,260	0/0:14,0:14:35.98:0,36,312	0/0:19,0:19:47.99:0,48,417	0/0:30,0:30:80.98:0,81,703	0/0:11,0:11:29.98:0,30,257	0/0:21,0:21:53.97:0,54,465	0/0:20,0:19:51.45:0,51,443	0/0:11,0:11:26.99:0,27,234	0/0:23,0:23:62.94:0,63,538	0/0:9,0:9:17.99:0,18,156	0/0:13,0:13:32.99:0,33,286	0/0:18,0:18:41.99:0,42,365	0/0:15,0:15:29.99:0,30,260	1/1:13,0:13:4.67:52,5,0	0/0:21,0:21:53.96:0,54,468	0/0:18,0:18:44.99:0,45,391	0/0:8,0:8:20.99:0,21,182
chr10	79833715	.	T	TTA	396.73	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.903;DP=460;FS=6.213;HRun=0;HaplotypeScore=58.0744;InbreedingCoeff=0.8293;MQ=70.66;MQ0=0;MQRankSum=1.845;QD=33.06;ReadPosRankSum=0.443;VQSLOD=5.0550;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:44.08:0,44,228	0/0:8,0:8:18.06:0,18,226	0/0:7,0:7:3:0,3,26	0/0:7,0:7:15.01:0,15,163	0/0:25,0:25:60.12:0,60,704	0/0:21,0:21:39.93:0,40,136	0/0:16,0:16:36.12:0,36,454	0/0:20,0:20:48.12:0,48,554	0/0:13,0:13:36.10:0,36,440	0/0:24,0:24:69.18:0,69,816	0/0:18,0:18:36.11:0,36,443	0/0:12,0:12:36.10:0,36,431	0/0:14,0:14:36.05:0,36,411	0/0:19,0:19:57.09:0,57,671	0/0:29,0:29:81.24:0,81,997	0/0:11,0:11:27.08:0,27,329	0/0:23,0:23:54.14:0,54,644	0/0:22,0:21:51.06:0,51,605	0/0:12,0:12:33.09:0,33,393	0/0:22,0:22:54.16:0,54,668	0/0:9,0:9:24.05:0,24,267	0/0:11,0:11:30.10:0,30,378	0/0:15,0:15:42.13:0,42,528	0/0:12,0:12:30.09:0,30,366	1/1:2,10:12:30.10:491,30,0	0/0:22,0:22:39.12:0,39,481	0/0:16,0:16:45.13:0,45,554	0/0:14,0:14:33.06:0,33,365
chr10	79834661	.	GC	G	425.79	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.737;DP=491;FS=3.786;HRun=3;HaplotypeScore=48.6883;InbreedingCoeff=0.9808;MQ=88.20;MQ0=0;MQRankSum=-1.814;QD=23.66;ReadPosRankSum=-0.639;VQSLOD=2.8543;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1386	0/0:9,0:9:27.09:0,27,389	0/0:18,0:18:48.12:0,48,666	0/0:19,0:18:42.95:0,43,576	0/0:17,0:17:48.14:0,48,657	0/0:26,0:26:75.25:0,75,1078	0/0:10,0:10:30.10:0,30,432	0/0:22,0:22:57.17:0,57,788	0/0:16,0:16:42.14:0,42,605	0/0:20,0:20:60.20:0,60,854	0/0:16,0:16:45.15:0,45,646	0/0:15,0:15:39.13:0,39,560	0/0:15,0:15:45.14:0,45,629	0/0:23,0:23:66.22:0,66,950	0/0:11,0:11:33.10:0,33,455	0/0:11,0:11:30.10:0,30,431	0/0:21,0:21:63.21:0,63,907	0/0:11,0:11:33.11:0,33,475	0/0:16,0:16:45.15:0,45,647	0/0:25,0:25:75.25:0,75,1079	0/0:9,0:9:27.09:0,27,389	0/0:19,0:18:51.17:0,51,734	0/0:23,0:23:63.20:0,63,886	0/0:13,0:12:39.13:0,39,562	1/1:0,18:18:42.06:521,42,0	0/0:23,0:23:69.22:0,69,961	0/0:26,0:26:68.89:0,69,965	0/0:5,0:5:15.05:0,15,216
chr10	79834843	.	TGAGAGAGAGAGAGA	T	240.62	PASS	AB=0.926;AC=10;AF=0.263;AN=38;BaseQRankSum=2.677;DP=412;FS=25.457;HRun=0;HaplotypeScore=123.2590;InbreedingCoeff=0.2537;MQ=39.98;MQ0=36;MQRankSum=-1.771;QD=2.09;ReadPosRankSum=-0.820;VQSLOD=0.7405;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:7:6.02:0,6,198	./.	./.	./.	0/1:13,0:10:0:0,0,0	0/0:13,0:13:0.47:0,0,1	0/0:20,0:18:3.01:0,3,37	1/1:22,0:19:2.99:64,3,0	0/1:11,0:11:69.99:70,0,76	0/0:21,0:17:8.84:0,9,119	0/0:13,1:13:2.98:0,3,21	1/1:16,3:15:3.01:114,3,0	./.	0/0:17,0:16:6.02:0,6,84	0/0:15,0:13:2.99:0,3,23	0/0:16,0:13:6.93:0,7,116	0/1:15,0:10:9.53:10,0,83	0/0:14,0:11:7.79:0,8,96	./.	0/0:24,0:20:12.02:0,12,266	0/1:13,4:14:0:0,0,0	./.	./.	./.	1/1:14,0:14:2.50:88,2,0	0/0:17,0:17:18.06:0,18,323	0/0:6,0:6:3:0,3,25
chr10	79836261	.	C	CAAA	415.25	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.680;DP=418;FS=6.589;HRun=7;HaplotypeScore=61.7821;InbreedingCoeff=0.9296;MQ=62.03;MQ0=1;MQRankSum=0.058;QD=18.88;ReadPosRankSum=1.389;VQSLOD=0.0224;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:12:12.41:33,12,0	0/0:6,0:6:18.06:0,18,246	0/0:9,0:7:14.04:0,14,163	0/0:7,0:4:8.98:0,9,102	0/0:31,0:31:90.29:0,90,1212	1/1:0,10:9:24.08:498,24,0	0/0:9,0:9:21.06:0,21,286	0/0:29,0:29:69.19:0,69,914	0/0:10,0:10:21.05:0,21,287	0/0:19,0:19:54.17:0,54,725	0/0:26,0:26:69.20:0,69,927	0/0:11,0:11:33.11:0,33,450	0/0:10,0:11:27.07:0,27,353	0/0:10,0:10:30.10:0,30,409	0/0:8,0:8:24.08:0,24,328	0/0:7,0:7:18.06:0,18,246	0/0:18,0:18:35.88:0,36,678	0/0:18,0:18:53.54:0,54,704	0/0:13,0:13:33.10:0,33,450	0/0:26,0:26:75.21:0,75,991	0/0:12,0:12:27.06:0,27,351	0/0:13,0:13:27.08:0,27,368	0/0:19,0:19:48.15:0,48,655	0/0:8,0:8:24.08:0,24,328	0/0:15,0:15:42.12:0,42,558	0/0:16,0:16:45.13:0,45,598	0/0:20,0:20:60.20:0,60,818	0/0:24,0:24:63.18:0,63,841
chr10	79836272	.	TA	T	266.19	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.607;DP=439;FS=0.000;HRun=7;HaplotypeScore=46.1234;InbreedingCoeff=0.8133;MQ=64.44;MQ0=0;MQRankSum=-0.287;QD=17.75;ReadPosRankSum=-1.094;VQSLOD=2.7920;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,4:15:38.99:361,39,0	0/0:6,0:6:18.03:0,18,202	0/0:9,0:7:15.99:0,16,184	0/0:6,0:3:3.01:0,3,38	0/0:33,0:33:90.29:0,90,1132	0/0:11,0:10:27.09:0,27,340	0/0:8,0:8:24.06:0,24,289	0/0:27,0:27:69.21:0,69,857	0/0:8,0:8:21.06:0,21,252	0/0:21,0:21:63.20:0,63,793	0/0:25,0:25:63.20:0,63,792	0/0:11,0:11:30.10:0,30,377	0/0:10,0:10:27.09:0,27,340	0/0:10,0:10:27.07:0,27,316	0/0:11,0:11:33.11:0,33,415	0/0:6,0:6:15.05:0,15,189	0/0:21,0:21:42.84:0,43,686	0/0:21,0:21:63.19:0,63,779	0/0:13,0:13:36.12:0,36,453	0/0:28,0:28:81.26:0,81,1011	0/0:10,0:10:27.09:0,27,340	0/0:11,0:11:27.09:0,27,339	0/0:20,0:20:60.19:0,60,755	0/0:8,0:8:21.05:0,21,250	0/0:20,0:20:60.18:0,60,743	0/0:21,0:21:57.17:0,57,706	0/0:26,0:26:69.20:0,69,844	0/0:23,0:23:69.21:0,69,855
chr10	79837142	.	G	GCA	2038.38	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.120;DP=622;FS=2.812;HRun=0;HaplotypeScore=87.7315;InbreedingCoeff=0.9511;MQ=65.86;MQ0=2;MQRankSum=-1.146;QD=30.42;ReadPosRankSum=-0.669;VQSLOD=5.2755;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,26:38:69.22:1171,69,0	0/0:6,0:6:18.06:0,18,235	0/0:20,0:13:8.96:0,9,113	0/0:26,0:16:13.70:0,14,143	0/0:12,0:12:27.09:0,27,355	1/1:3,26:29:60.20:989,60,0	0/0:24,0:24:69.17:0,69,858	0/0:16,0:16:42.12:0,42,525	0/0:34,0:34:81.24:0,81,1034	0/0:19,0:19:39.12:0,39,507	0/0:10,0:10:21.04:0,21,246	0/0:28,0:28:78.21:0,78,1003	0/0:25,0:25:66.21:0,66,864	0/0:32,0:32:87.23:0,87,1106	0/0:21,0:21:54.16:0,54,695	0/0:22,0:22:57.17:0,57,734	0/0:26,0:26:66.15:0,66,830	0/0:16,0:16:45.15:0,45,591	0/0:14,0:14:24.08:0,24,311	0/0:14,0:14:33.09:0,33,416	0/0:60,0:59:99:0,131,1626	0/0:12,0:12:27.07:0,27,329	0/0:12,0:12:27.09:0,27,355	0/0:34,0:34:87.28:0,87,1136	0/0:10,0:10:27.09:0,27,354	0/0:22,0:22:54.17:0,54,709	0/0:19,0:19:39.08:0,39,478	0/0:19,0:19:51.12:0,51,649
chr10	79837466	.	CTG	C	857.38	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=7.149;DP=318;FS=1.774;HRun=0;HaplotypeScore=39.2539;InbreedingCoeff=0.6342;MQ=66.31;MQ0=0;MQRankSum=-0.001;QD=28.58;ReadPosRankSum=2.529;VQSLOD=4.1407;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:24.08:368,24,0	0/0:6,0:6:18.06:0,18,348	0/0:2,0:2:6.02:0,6,116	0/1:7,0:7:20.83:21,0,160	0/0:22,0:22:63.22:0,63,1217	1/1:0,14:14:39.13:597,39,0	0/0:5,0:5:15.05:0,15,290	0/0:37,0:37:99:0,111,2125	0/0:9,0:9:27.09:0,27,521	0/0:16,0:16:48.16:0,48,928	0/0:25,0:25:75.24:0,75,1414	0/0:5,0:5:15.05:0,15,290	0/0:6,0:6:18.06:0,18,348	0/0:5,0:5:15.05:0,15,290	0/0:7,0:7:21.07:0,21,406	0/0:13,0:13:39.13:0,39,753	0/0:13,0:13:39.13:0,39,753	0/0:11,0:11:30.10:0,30,571	0/0:14,0:13:42.14:0,42,781	0/0:16,0:16:48.16:0,48,919	0/0:6,0:6:18.06:0,18,348	0/0:2,0:2:6.01:0,6,74	0/0:9,0:9:24.07:0,24,430	0/0:1,0:1:3.01:0,3,58	0/0:4,0:4:12.04:0,12,232	0/0:18,0:18:54.18:0,54,1002	0/0:20,0:20:60.19:0,60,1126	0/0:16,0:16:48.16:0,48,915
chr10	79838553	.	ACACACACACTC	A	1247.35	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=9.112;DP=716;FS=8.426;HRun=0;HaplotypeScore=219.7979;InbreedingCoeff=0.4214;MQ=52.71;MQ0=26;MQRankSum=-7.741;QD=5.52;ReadPosRankSum=-0.636;VQSLOD=1.5612;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,7:26:41.05:813,41,0	0/0:7,0:7:17.99:0,18,574	0/0:53,0:21:25.96:0,26,300	0/1:56,0:18:19.77:20,0,447	0/0:21,0:21:47.77:0,48,1924	0/1:22,0:22:54.25:54,0,102	0/0:29,0:29:68.38:0,68,1920	0/0:34,0:31:78.08:0,78,1613	0/0:21,0:21:51.64:0,52,1576	0/0:24,0:19:54.17:0,54,1787	0/0:23,0:22:57.17:0,57,2295	0/1:25,0:23:15.32:67,0,15	1/1:20,0:18:17.60:211,18,0	1/1:19,0:17:9.84:198,10,0	0/0:26,0:22:54.18:0,54,2020	0/0:7,0:7:21.07:0,21,800	0/0:37,0:37:93.10:0,93,3795	0/0:19,0:18:38.25:0,38,1548	0/0:32,0:26:57.26:0,57,1887	0/0:22,0:22:51:0,51,1576	0/0:48,0:46:92.28:0,92,2736	0/1:21,0:20:10.11:10,0,73	1/1:14,0:12:2.97:21,3,0	0/0:23,0:21:1.47:0,1,41	0/1:15,0:15:19.39:19,0,27	0/0:32,0:32:78.12:0,78,2595	0/0:18,0:18:45.15:0,45,1754	0/0:14,0:13:33.11:0,33,1079
chr10	79838559	.	ACACTC	A	1235.65	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=9.244;DP=732;FS=8.550;HRun=0;HaplotypeScore=161.9075;InbreedingCoeff=0.4902;MQ=50.47;MQ0=35;MQRankSum=-8.676;QD=5.13;ReadPosRankSum=1.505;VQSLOD=2.2145;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:30:60.70:291,0,61	0/0:7,0:7:17.99:0,18,370	0/0:53,0:18:23.63:0,24,266	0/1:65,0:16:15.62:16,0,440	0/0:18,0:18:46.60:0,47,1251	1/1:9,12:21:32.81:659,33,0	0/0:28,0:28:63.43:0,63,1554	0/0:33,0:27:77.83:0,78,1542	0/0:20,0:20:54.18:0,54,1351	0/0:26,0:19:57.18:0,57,1359	0/0:22,0:21:57.17:0,57,1380	0/1:25,0:23:18.57:58,0,19	1/1:20,0:18:20.59:209,21,0	0/1:21,0:19:2.40:102,0,2	0/0:26,0:22:60.20:0,60,1469	0/0:7,0:7:21.07:0,21,539	0/0:37,0:37:99:0,102,2652	0/0:19,0:18:3.26:0,3,1168	0/0:32,0:27:51.22:0,51,1406	0/0:22,0:21:59.78:0,60,1336	0/0:50,0:46:99:0,105,2454	0/1:22,0:21:1.55:2,0,88	1/1:14,0:12:2.94:19,3,0	0/0:24,0:22:13.05:0,13,94	1/1:15,0:15:8.40:42,8,0	0/0:31,0:31:84.27:0,84,1941	0/0:19,0:18:48.16:0,48,1234	0/0:17,0:16:41.62:0,42,874
chr10	79838561	.	ACTCCACAC	A	2473.26	PASS	AB=0.758;AC=14;AF=0.250;AN=56;BaseQRankSum=10.367;DP=724;FS=4.180;HRun=0;HaplotypeScore=184.4229;InbreedingCoeff=0.5885;MQ=49.30;MQ0=37;MQRankSum=-9.269;QD=12.88;ReadPosRankSum=-0.689;VQSLOD=2.6497;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:30:88.11:256,0,88	0/0:7,0:7:18.06:0,18,556	0/0:44,0:13:14.55:0,15,262	0/0:56,0:14:21.67:0,22,577	0/0:19,0:19:46.65:0,47,1739	1/1:17,0:20:15.74:79,16,0	0/0:28,0:28:57.24:0,57,2106	0/0:34,0:27:78.27:0,78,2096	0/0:19,0:19:54.19:0,54,1734	0/0:27,0:20:60.21:0,60,1918	0/0:22,0:21:57.20:0,57,2087	1/1:6,15:19:23.06:434,23,0	1/1:4,15:18:21.07:556,21,0	1/1:7,13:18:24.36:516,24,0	0/0:26,0:22:60.21:0,60,1971	0/0:7,0:7:21.07:0,21,754	0/0:37,0:38:99:0,108,3759	0/0:19,0:18:49.11:0,49,1561	0/0:32,0:27:64.84:0,65,1993	0/0:22,0:21:57.13:0,57,1779	0/0:52,0:49:99:0,114,3450	0/1:15,7:22:17.15:345,0,17	1/1:1,12:12:5.98:94,6,0	0/1:18,3:22:28.20:328,0,28	0/1:1,0:15:40.50:45,0,40	0/0:31,0:30:87.28:0,87,2703	0/0:17,0:16:48.16:0,48,1694	0/0:18,0:16:37.58:0,38,1176
chr10	79838562	.	C	CA	266	PASS	AB=0.760;AC=3;AF=0.054;AN=56;BaseQRankSum=6.052;DP=732;FS=0.858;HRun=1;HaplotypeScore=131.8027;InbreedingCoeff=0.4810;MQ=49.32;MQ0=40;MQRankSum=-4.421;QD=4.75;ReadPosRankSum=-0.685;VQSLOD=-0.1027;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,12:29:99:124,0,111	0/0:7,0:7:18.06:0,18,247	0/0:49,0:14:23.47:0,23,241	0/0:64,0:15:22.14:0,22,340	0/0:20,0:20:48.16:0,48,670	1/1:16,2:18:22.59:247,23,0	0/0:30,0:29:69.19:0,69,953	0/0:36,0:29:78.05:0,78,1053	0/0:19,0:19:54.18:0,54,747	0/0:27,0:20:60.18:0,60,807	0/0:22,0:21:57.18:0,57,773	0/0:21,0:19:12.80:0,13,153	0/0:20,0:18:5.71:0,6,58	0/0:20,0:18:13.49:0,13,139	0/0:26,0:22:60.19:0,60,828	0/0:7,0:7:21.07:0,21,294	0/0:37,0:38:99:0,108,1449	0/0:19,0:18:50.72:0,51,710	0/0:31,0:27:69.36:0,69,883	0/0:22,0:21:60.15:0,60,785	0/0:54,0:50:99:0,113,1500	0/0:22,0:21:20.84:0,21,184	0/0:13,0:11:2.86:0,3,20	0/0:21,0:22:13.55:0,14,222	0/0:16,0:16:7.89:0,8,50	0/0:32,0:30:87.29:0,87,1203	0/0:19,0:18:48.16:0,48,667	0/0:17,0:16:42.08:0,42,553
chr10	79838564	.	CCA	C	430.70	PASS	AB=0.952;AC=20;AF=0.370;AN=54;BaseQRankSum=7.590;DP=752;FS=1.205;HRun=0;HaplotypeScore=144.6366;InbreedingCoeff=-0.1264;MQ=48.14;MQ0=44;MQRankSum=-5.869;QD=1.10;ReadPosRankSum=2.151;VQSLOD=2.5821;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:30:34.04:34,0,134	0/1:5,1:6:25.39:25,0,84	./.	0/0:66,0:14:10.23:0,10,101	0/0:21,0:21:18.55:0,19,431	1/1:25,0:25:23.48:95,23,0	0/0:18,0:29:36.91:0,37,392	0/1:35,2:29:42.03:42,0,180	0/0:19,0:19:33.11:0,33,509	0/1:27,2:21:4.40:4,0,384	0/1:18,3:20:57.46:57,0,504	0/1:21,0:19:4.79:29,0,5	1/1:21,0:19:13.26:78,13,0	0/1:20,0:18:10.91:38,0,11	0/1:25,1:22:29.83:30,0,468	0/1:9,0:9:4.28:4,0,251	0/0:39,0:39:49.24:0,49,1115	0/1:18,1:18:5.96:6,0,308	0/1:33,0:28:13.86:14,0,387	0/1:20,2:21:47.89:48,0,454	0/0:52,1:48:5.78:0,6,897	0/0:21,0:20:5.81:0,6,47	1/1:14,0:12:2.47:12,2,0	0/0:23,0:23:11.65:0,12,82	0/0:16,0:16:0.29:0,0,5	0/1:29,2:29:26.84:27,0,514	0/0:19,0:18:36.55:0,37,518	0/1:17,1:16:44.92:45,0,253
chr10	79838571	.	C	CACAAT	861.90	PASS	AB=0.877;AC=7;AF=0.125;AN=56;BaseQRankSum=3.925;DP=782;FS=2.539;HRun=0;HaplotypeScore=184.2475;InbreedingCoeff=-0.1295;MQ=45.10;MQ0=54;MQRankSum=-5.532;QD=6.03;ReadPosRankSum=-3.982;VQSLOD=1.6040;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:33:32.29:0,32,388	0/0:6,0:6:15.03:0,15,245	0/0:55,0:7:9.03:0,9,134	0/0:74,0:14:32.90:0,33,516	0/0:22,0:22:49.90:0,50,975	0/0:28,0:27:19.41:0,19,435	0/0:30,0:29:56.95:0,57,833	0/0:41,0:32:90.21:0,90,1385	0/0:22,0:21:54.16:0,54,1027	0/0:23,0:16:39.13:0,39,762	0/0:23,0:22:59.80:0,60,1151	0/1:20,2:21:88.57:89,0,160	0/1:20,1:19:26.38:274,0,26	0/1:18,1:19:60.39:60,0,114	0/0:26,0:22:57.19:0,57,1093	0/0:9,0:9:27.09:0,27,514	0/0:40,0:39:99:0,108,2077	0/0:19,0:17:48.13:0,48,821	0/0:32,0:25:62.30:0,62,1034	0/0:22,0:21:53.39:0,53,987	0/0:58,0:54:99:0,129,2387	0/1:14,7:21:99:196,0,102	0/1:11,0:10:12.31:42,0,12	0/1:18,8:28:99:274,0,177	0/1:17,0:17:57.74:58,0,204	0/0:27,0:24:69.17:0,69,1278	0/0:21,0:20:57.20:0,57,1134	0/0:18,0:16:33.11:0,33,615
chr10	79838597	.	AC	A	284.40	PASS	AB=0.772;AC=2;AF=0.036;AN=56;BaseQRankSum=6.023;DP=806;FS=1.009;HRun=2;HaplotypeScore=158.2112;InbreedingCoeff=-0.0393;MQ=47.62;MQ0=35;MQRankSum=-4.687;QD=3.90;ReadPosRankSum=-0.662;VQSLOD=0.0603;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,11:35:99:164,0,470	0/0:4,0:4:11.99:0,12,153	0/0:67,0:9:27.04:0,27,350	0/0:84,1:24:57.19:0,57,827	0/0:21,0:21:47.74:0,48,699	0/1:19,10:27:99:209,0,450	0/0:23,0:23:57.19:0,57,851	0/0:43,0:38:99:0,105,1545	0/0:19,1:20:18.35:0,18,744	0/0:25,0:22:60.20:0,60,879	0/0:23,0:23:66.21:0,66,960	0/0:20,0:20:24.04:0,24,321	0/0:18,0:18:45.15:0,45,647	0/0:22,0:22:42.11:0,42,566	0/0:22,0:22:63.21:0,63,933	0/0:10,0:10:30.10:0,30,444	0/0:38,1:38:99:0,99,1439	0/0:22,0:20:50.80:0,51,734	0/0:28,0:24:66.22:0,66,960	0/0:28,0:28:81.26:0,81,1187	0/0:63,0:60:99:0,156,2283	0/0:24,0:23:26.91:0,27,367	0/0:14,0:14:16.15:0,16,202	0/0:29,0:29:41.74:0,42,579	0/0:14,0:14:20.76:0,21,283	0/0:27,0:26:72.23:0,72,1039	0/0:22,0:22:66.22:0,66,987	0/0:17,1:17:42.14:0,42,604
chr10	79838615	.	CAT	C	345.47	PASS	AB=0.834;AC=3;AF=0.054;AN=56;BaseQRankSum=6.939;DP=801;FS=1.900;HRun=0;HaplotypeScore=174.1636;InbreedingCoeff=-0.0500;MQ=52.61;MQ0=14;MQRankSum=-4.884;QD=3.49;ReadPosRankSum=0.382;VQSLOD=2.9929;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,9:36:99:181,0,672	0/0:5,0:5:12.04:0,12,231	0/0:71,0:21:53.15:0,53,784	0/0:69,0:26:34.05:0,34,701	0/0:21,0:21:47.58:0,48,847	0/1:16,15:29:99:253,0,457	0/0:20,0:20:45.15:0,45,848	0/0:48,0:47:99:0,135,2436	0/0:25,0:24:66.20:0,66,1211	0/0:24,0:24:67.85:0,68,1083	0/0:19,0:19:57.18:0,57,1035	0/0:19,0:19:36.10:0,36,638	0/0:29,0:28:78.08:0,78,1334	0/0:20,0:20:39.96:0,40,716	0/0:21,0:21:60.08:0,60,1065	0/0:14,0:14:39.58:0,40,715	0/0:36,0:36:84.25:0,84,1552	0/1:25,0:25:1.67:2,0,926	0/0:26,0:23:59.87:0,60,1065	0/0:27,0:27:75.18:0,75,1378	0/0:66,0:65:99:0,168,2904	0/0:27,0:26:46.97:0,47,808	0/0:13,0:13:21.27:0,21,361	0/0:27,1:28:48.15:0,48,897	0/0:15,0:15:24.08:0,24,456	0/0:24,0:24:69.80:0,70,1238	0/0:19,0:19:54.18:0,54,987	0/0:16,0:15:27.64:0,28,694
chr10	79838653	.	T	TAC	735.44	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=6.856;DP=818;FS=0.000;HRun=0;HaplotypeScore=147.5832;InbreedingCoeff=0.5393;MQ=52.98;MQ0=22;MQRankSum=-4.236;QD=11.31;ReadPosRankSum=-3.495;VQSLOD=2.6050;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:38.59:0,39,454	0/0:5,0:5:15.05:0,15,191	0/0:62,0:13:2.88:0,3,100	0/0:52,0:14:7.57:0,8,80	0/0:22,0:22:51.12:0,51,620	1/1:19,17:33:50.36:817,50,0	0/0:23,0:23:57.17:0,57,703	0/0:44,0:41:62.63:0,63,832	0/0:23,0:22:51.14:0,51,623	0/0:31,0:28:69.13:0,69,844	0/0:22,0:22:57.16:0,57,695	0/0:21,0:21:51.16:0,51,648	0/0:30,0:29:84.24:0,84,1035	0/0:18,0:18:51.16:0,51,644	0/0:18,0:19:40.80:0,41,622	0/0:15,0:15:24.61:0,25,443	0/0:40,0:40:93.30:0,93,1178	0/1:29,0:29:24.16:24,0,646	0/0:30,0:26:54:0,54,650	0/0:30,0:30:78.24:0,78,973	0/0:58,0:57:99:0,126,1581	0/0:26,0:26:51.10:0,51,648	0/0:17,0:17:45.13:0,45,558	0/0:30,0:29:60.12:0,60,729	0/0:20,0:20:48.14:0,48,596	0/0:31,0:31:84.25:0,84,1038	0/0:32,0:32:71.55:0,72,853	0/0:16,0:16:39.12:0,39,490
chr10	79838659	.	C	CAT	400.58	PASS	AB=0.903;AC=3;AF=0.054;AN=56;BaseQRankSum=7.123;DP=796;FS=1.754;HRun=0;HaplotypeScore=143.2027;InbreedingCoeff=0.6219;MQ=52.84;MQ0=21;MQRankSum=-3.621;QD=6.68;ReadPosRankSum=-0.409;VQSLOD=3.1568;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:42.50:0,43,583	0/0:5,0:5:15.05:0,15,229	0/0:56,0:14:31.61:0,32,355	0/0:51,0:20:27.89:0,28,341	0/0:23,0:23:63.13:0,63,872	1/1:31,0:29:13.97:426,14,0	0/0:23,0:23:63.18:0,63,917	0/0:36,0:34:95.73:0,96,1235	0/0:24,0:23:60.14:0,60,846	0/0:32,0:29:81.18:0,81,1141	0/0:24,0:24:69.18:0,69,963	0/0:22,0:22:48.03:0,48,810	0/0:30,0:29:84.29:0,84,1278	0/0:20,0:20:51.17:0,51,778	0/0:19,0:19:33.33:0,33,779	0/0:16,0:16:44.71:0,45,610	0/0:38,0:38:99:0,105,1506	0/1:25,3:28:75.75:76,0,829	0/0:24,0:20:60.17:0,60,859	0/0:30,0:30:81.26:0,81,1213	0/0:54,2:55:99:0,145,2070	0/0:25,0:25:51.11:0,51,779	0/0:17,0:17:45.15:0,45,684	0/0:29,0:28:60.20:0,60,911	0/0:20,0:20:54.15:0,54,782	0/0:30,0:30:90.29:0,90,1335	0/0:29,0:29:81.20:0,81,1144	0/0:17,0:17:51.09:0,51,686
chr10	79838780	.	A	ATGTC	2165.77	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.500;DP=551;FS=2.450;HRun=0;HaplotypeScore=85.9929;InbreedingCoeff=0.9912;MQ=83.37;MQ0=0;MQRankSum=-4.021;QD=50.37;ReadPosRankSum=1.710;VQSLOD=4.6698;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,19:24:51.17:1386,51,0	0/0:5,0:5:15.05:0,15,291	0/0:14,0:14:30.14:0,30,727	0/0:21,0:21:63.19:0,63,1118	0/0:30,0:30:87.28:0,87,1632	1/1:2,15:19:33.11:901,33,0	0/0:19,0:19:57.20:0,57,1096	0/0:25,0:25:75.20:0,75,1352	0/0:14,0:14:42.14:0,42,807	0/0:29,0:29:78.27:0,78,1493	0/0:26,0:26:78.26:0,78,1461	0/0:17,0:17:48.16:0,48,910	0/0:23,0:23:66.23:0,66,1256	0/0:16,0:16:33.11:0,33,639	0/0:14,0:14:42.13:0,42,781	0/0:18,0:18:42.13:0,42,775	0/0:22,0:22:57.20:0,57,1105	0/0:25,0:25:63.22:0,63,1209	0/0:20,0:20:54.19:0,54,1043	0/0:21,0:21:60.21:0,60,1154	0/0:20,0:20:57.20:0,57,1105	0/0:20,0:20:54.19:0,54,1047	0/0:14,0:14:36.12:0,36,698	0/0:14,0:14:42.14:0,42,805	0/0:22,0:22:63.22:0,63,1221	0/0:28,0:27:81.26:0,81,1531	0/0:19,0:19:54.19:0,54,1036	0/0:12,0:12:36.12:0,36,678
chr10	79840609	.	A	AAAAAC	430.99	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.676;DP=562;FS=0.000;HRun=0;HaplotypeScore=109.8577;InbreedingCoeff=0.8537;MQ=56.53;MQ0=10;MQRankSum=-4.639;QD=13.90;ReadPosRankSum=0.199;VQSLOD=2.9266;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,4:31:32.44:525,32,0	0/0:9,0:9:21.07:0,21,380	0/0:25,0:10:8.96:0,9,96	0/0:38,0:9:8.38:0,8,52	0/0:32,0:32:51.17:0,51,870	0/0:16,0:16:30.09:0,30,482	0/0:15,0:15:30.08:0,30,488	0/0:25,0:25:33.11:0,33,500	0/0:12,0:12:15.05:0,15,263	0/0:26,0:26:54.18:0,54,915	0/0:27,0:27:42.14:0,42,744	0/0:19,0:19:42.12:0,42,621	0/0:8,0:8:18.02:0,18,215	0/0:13,0:13:24.06:0,24,337	0/0:18,0:18:36.11:0,36,617	0/0:15,0:15:36.09:0,36,542	0/0:41,0:41:93.27:0,93,1524	0/0:22,0:22:42.14:0,42,736	0/0:16,0:15:24.07:0,24,386	0/0:20,0:20:57.17:0,57,952	0/0:12,0:12:21.05:0,21,336	0/0:16,0:16:30.08:0,30,420	0/0:22,0:22:30.07:0,30,436	0/0:15,0:15:27.05:0,27,396	0/0:20,0:20:29.83:0,30,382	0/0:16,0:15:33.09:0,33,514	0/0:26,0:26:60.18:0,60,926	0/0:7,0:7:20.99:0,21,219
chr10	79840637	.	C	CAAAAAA	1121.14	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.956;DP=529;FS=2.715;HRun=9;HaplotypeScore=117.5481;InbreedingCoeff=0.9398;MQ=61.20;MQ0=2;MQRankSum=0.706;QD=8.01;ReadPosRankSum=2.293;VQSLOD=-0.6958;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,16:29:32.97:710,33,0	0/0:7,0:8:20.88:0,21,286	0/0:18,0:15:7.58:0,8,328	0/0:17,0:5:8.88:0,9,128	0/0:27,0:27:66.16:0,66,1155	0/0:2,0:17:40.17:0,40,210	0/0:16,0:16:45.07:0,45,731	0/0:36,0:36:70.18:0,70,1263	0/0:10,0:10:30.08:0,30,468	0/0:27,0:28:72.01:0,72,1218	0/0:22,0:22:51.09:0,51,854	1/1:4,0:20:7.24:35,7,0	1/1:1,0:7:7.27:21,7,0	1/1:3,0:12:14.76:43,15,0	0/0:13,0:13:36.07:0,36,585	0/0:10,0:11:29.96:0,30,506	0/0:35,0:35:99:0,102,1725	0/0:18,0:18:48.03:0,48,800	0/0:12,0:13:26.52:0,27,432	0/0:29,0:29:78.01:0,78,1225	0/0:8,0:8:15.01:0,15,278	1/1:0,0:19:36.67:172,37,0	1/1:4,0:22:24.17:107,24,0	1/1:2,0:13:16.57:48,17,0	1/1:2,0:18:22.81:184,23,0	0/0:20,0:20:57:0,57,821	0/0:28,0:28:75.10:0,75,1317	0/0:15,0:15:39.02:0,39,624
chr10	79841333	.	G	GTAT	2965.11	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.102;DP=640;FS=4.432;HRun=0;HaplotypeScore=85.2832;InbreedingCoeff=0.9705;MQ=80.60;MQ0=0;MQRankSum=-2.075;QD=57.02;ReadPosRankSum=1.804;VQSLOD=5.5862;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:84.29:1829,84,0	0/0:13,0:13:39.13:0,39,627	0/0:17,0:17:42.14:0,42,667	0/0:15,0:15:42.06:0,42,582	0/0:38,0:38:99:0,111,1758	1/1:2,20:22:57.20:1257,57,0	0/0:14,0:14:39.13:0,39,626	0/0:30,0:30:81.27:0,81,1279	0/0:24,0:24:69.24:0,69,1109	0/0:30,0:30:90.30:0,90,1426	0/0:35,0:35:99:0,105,1687	0/0:24,0:24:72.25:0,72,1156	0/0:22,0:22:57.19:0,57,916	0/0:25,0:25:66.22:0,66,1061	0/0:20,0:20:57.18:0,57,893	0/0:13,0:13:36.12:0,36,579	0/0:15,0:15:39.12:0,39,599	0/0:13,0:13:39.13:0,39,624	0/0:23,0:23:60.20:0,60,961	0/0:42,0:42:99:0,120,1904	0/0:16,0:16:48.16:0,48,771	0/0:25,0:25:72.25:0,72,1157	0/0:25,0:25:66.21:0,66,1037	0/0:3,0:3:9.03:0,9,145	0/0:25,0:25:72.25:0,72,1156	0/0:24,0:24:66.22:0,66,1058	0/0:45,0:45:99:0,120,1924	0/0:12,0:12:36.12:0,36,579
chr10	79843547	.	AT	A	605.92	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.829;DP=497;FS=3.277;HRun=2;HaplotypeScore=49.2380;InbreedingCoeff=0.9735;MQ=80.21;MQ0=0;MQRankSum=-3.022;QD=31.89;ReadPosRankSum=1.866;VQSLOD=3.3308;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:54.18:701,54,0	0/0:5,0:5:15.05:0,15,223	0/0:9,0:9:24.08:0,24,345	0/0:17,0:17:47.81:0,48,642	0/0:22,0:22:66.22:0,66,970	0/0:22,0:22:66.22:0,66,987	0/0:12,0:12:36.09:0,36,499	0/0:25,0:25:72.23:0,72,1044	0/0:12,0:12:36.11:0,36,521	0/0:29,0:29:87.27:0,87,1232	0/0:30,0:30:90.30:0,90,1348	0/0:18,0:18:54.18:0,54,809	0/0:19,0:19:57.19:0,57,854	0/0:19,0:19:57.18:0,57,833	0/0:11,0:11:33.10:0,33,474	0/0:13,0:13:39.12:0,39,564	0/0:13,0:13:36.09:0,36,499	0/0:10,0:10:30.07:0,30,425	0/0:19,0:19:57.18:0,57,836	0/0:28,0:28:84.26:0,84,1218	0/0:12,0:12:36.10:0,36,516	0/0:16,0:16:48.13:0,48,666	0/0:28,0:28:81.27:0,81,1203	0/0:6,0:6:18.06:0,18,270	0/0:31,0:31:93.29:0,93,1353	0/0:12,0:12:36.12:0,36,539	0/0:25,0:25:75.25:0,75,1104	0/0:15,0:15:45.15:0,45,669
chr10	79844910	.	A	ACT	7382.91	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-3.479;DP=611;FS=2.583;HRun=0;HaplotypeScore=74.5098;InbreedingCoeff=0.9937;MQ=66.79;MQ0=1;MQRankSum=-0.302;QD=42.68;ReadPosRankSum=1.849;VQSLOD=6.2670;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:16:45.13:798,45,0	0/0:4,0:4:12.03:0,12,159	0/0:11,0:10:30.07:0,30,401	0/0:13,0:13:35.85:0,36,444	0/0:40,0:40:99:0,111,1614	1/1:2,16:19:40.38:723,40,0	0/0:15,0:15:42.13:0,42,601	0/0:32,0:32:84.26:0,84,1186	0/0:22,0:22:66.22:0,66,954	0/0:42,0:42:99:0,120,1734	0/0:27,0:27:78.26:0,78,1132	1/1:0,14:14:36.12:663,36,0	1/1:1,29:30:69.24:1274,69,0	1/1:2,13:16:33.11:609,33,0	0/0:32,0:32:93.29:0,93,1319	0/0:17,0:17:48.15:0,48,689	0/0:19,0:19:51.17:0,51,750	0/0:27,0:25:69.19:0,69,957	0/0:22,0:22:60.18:0,60,857	0/0:36,0:36:99:0,105,1501	0/0:13,0:13:36.12:0,36,530	1/1:0,14:14:39.13:719,39,0	1/1:0,27:28:66.23:1216,66,0	1/1:0,8:8:18.06:332,18,0	1/1:1,26:27:57.20:1049,57,0	0/0:33,0:32:96.30:0,96,1354	0/0:20,0:20:54.16:0,54,757	0/0:13,0:12:39.13:0,39,562
chr10	79845250	.	AT	A	186.33	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.089;DP=590;FS=0.000;HRun=1;HaplotypeScore=65.0839;InbreedingCoeff=0.9933;MQ=81.89;MQ0=0;MQRankSum=-2.338;QD=20.70;ReadPosRankSum=-0.320;VQSLOD=3.4413;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:9:24.92:280,25,0	0/0:7,0:7:21.07:0,21,336	0/0:20,0:20:60.20:0,60,927	0/0:12,0:12:36.12:0,36,572	0/0:35,0:35:99:0,99,1500	0/0:31,0:31:93.30:0,93,1462	0/0:13,0:13:36.09:0,36,528	0/0:33,0:33:99:0,99,1473	0/0:18,0:18:54.18:0,54,863	0/0:28,0:28:84.27:0,84,1302	0/0:27,0:27:78.23:0,78,1193	0/0:29,0:29:87.30:0,87,1378	0/0:25,0:25:75.26:0,75,1192	0/0:13,0:13:39.12:0,39,598	0/0:27,0:27:81.28:0,81,1280	0/0:12,0:12:36.11:0,36,550	0/0:20,0:20:57.05:0,57,838	0/0:18,0:17:48.10:0,48,735	0/0:18,0:18:54.18:0,54,836	0/0:36,0:36:99:0,108,1695	0/0:16,0:16:48.15:0,48,743	0/0:28,0:28:84.29:0,84,1342	0/0:28,0:28:84.26:0,84,1295	0/0:10,0:10:30.10:0,30,479	0/0:15,0:15:45.14:0,45,696	0/0:18,0:18:54.18:0,54,842	0/0:27,0:27:81.28:0,81,1294	0/0:17,0:17:51.17:0,51,815
chr10	79845748	.	AG	A	3144.21	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=7.850;DP=380;FS=3.489;HRun=1;HaplotypeScore=38.5046;InbreedingCoeff=0.9756;MQ=76.36;MQ0=0;MQRankSum=-0.415;QD=33.10;ReadPosRankSum=4.453;VQSLOD=3.2004;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:29.53:0,30,138	0/0:5,0:5:15.05:0,15,235	0/0:5,0:5:15.05:0,15,230	0/0:10,0:10:23.99:0,24,282	0/0:25,0:25:75.26:0,75,1173	1/1:0,18:18:39.13:545,39,0	0/0:8,0:8:24.08:0,24,372	0/0:33,0:33:99:0,99,1507	0/0:17,0:17:51.16:0,51,776	0/0:23,0:23:69.22:0,69,1042	0/0:17,0:17:48.16:0,48,749	1/1:0,12:12:33.11:461,33,0	1/1:0,12:12:30.10:419,30,0	1/1:0,11:11:24.08:335,24,0	0/0:8,0:8:24.08:0,24,371	0/0:16,0:16:48.15:0,48,729	0/0:5,0:5:15.05:0,15,234	0/0:10,0:10:30.10:0,30,460	0/0:23,0:23:69.23:0,69,1059	0/0:22,0:22:66.22:0,66,1032	0/0:5,0:5:15.05:0,15,235	1/1:0,3:3:9.03:126,9,0	1/1:0,13:13:36.12:503,36,0	1/1:0,9:9:24.08:336,24,0	1/1:0,17:17:45.15:623,45,0	0/0:20,0:20:26.33:0,26,195	0/0:16,0:15:48.13:0,48,702	0/0:6,0:6:16.70:0,17,80
chr10	79846012	.	T	TACTGA	1255.80	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.081;DP=490;FS=9.511;HRun=0;HaplotypeScore=88.9806;InbreedingCoeff=0.9878;MQ=87.84;MQ0=0;MQRankSum=-2.710;QD=73.87;ReadPosRankSum=1.482;VQSLOD=4.7561;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:36.12:0,36,738	0/0:9,0:9:21.07:0,21,414	0/0:19,0:19:51.17:0,51,1017	0/0:17,0:17:45.13:0,45,790	0/0:16,0:16:48.16:0,48,957	0/0:27,0:27:75.26:0,75,1538	0/0:16,0:16:39.12:0,39,763	0/0:29,0:29:57.18:0,57,1119	0/0:27,0:27:72.25:0,72,1461	0/0:33,0:33:96.32:0,96,1901	0/0:19,0:19:57.20:0,57,1169	0/0:16,0:16:48.16:0,48,985	0/0:18,0:18:51.16:0,51,994	0/0:22,0:22:57.20:0,57,1170	0/0:14,0:13:39.13:0,39,800	0/0:21,0:21:57.18:0,57,1115	0/0:11,0:11:24.08:0,24,492	0/0:9,0:9:24.08:0,24,461	0/0:13,0:13:36.12:0,36,717	0/0:14,0:14:36.11:0,36,688	0/0:32,0:32:84.29:0,84,1706	0/0:9,0:9:27.09:0,27,551	0/0:12,0:12:36.12:0,36,725	0/0:8,0:8:24.08:0,24,492	1/1:2,15:17:45.15:1351,45,0	0/0:19,0:19:51.18:0,51,1046	0/0:19,0:19:45.15:0,45,923	0/0:12,0:12:30.07:0,30,546
chr10	79846856	.	AT	A	701.18	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.095;DP=602;FS=3.125;HRun=1;HaplotypeScore=58.3693;InbreedingCoeff=0.9993;MQ=80.41;MQ0=0;MQRankSum=-3.070;QD=35.06;ReadPosRankSum=3.079;VQSLOD=3.7767;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:57.19:796,57,0	0/0:13,0:13:39.13:0,39,597	0/0:17,0:17:50.92:0,51,679	0/0:14,0:14:41.95:0,42,541	0/0:36,0:36:99:0,108,1542	0/0:24,0:24:72.24:0,72,1091	0/0:11,0:11:33.11:0,33,504	0/0:38,0:38:99:0,114,1664	0/0:20,0:20:60.19:0,60,894	0/0:39,0:39:99:0,117,1733	0/0:32,0:32:93.30:0,93,1401	0/0:20,0:20:60.17:0,60,859	0/0:24,0:24:71.90:0,72,1029	0/0:16,0:16:48.16:0,48,733	0/0:23,0:23:69.22:0,69,1021	0/0:16,0:16:48.16:0,48,734	0/0:23,0:23:69.23:0,69,1050	0/0:21,0:21:54.09:0,54,784	0/0:22,0:22:63.20:0,63,929	0/0:27,0:27:81.24:0,81,1197	0/0:13,0:13:39.11:0,39,571	0/0:24,0:24:72.20:0,72,1038	0/0:16,0:16:48.13:0,48,677	0/0:15,0:15:45.13:0,45,659	0/0:27,0:27:81.23:0,81,1176	0/0:24,0:24:72.21:0,72,1025	0/0:16,0:16:48.13:0,48,687	0/0:11,0:11:33.07:0,33,450
chr10	79848696	.	A	AACAC	3023.02	PASS	AB=0.903;AC=21;AF=0.404;AN=52;BaseQRankSum=-2.500;DP=658;FS=1.841;HRun=0;HaplotypeScore=132.8176;InbreedingCoeff=0.7175;MQ=63.66;MQ0=6;MQRankSum=-1.029;QD=12.14;ReadPosRankSum=-1.083;VQSLOD=3.3881;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:38:8.28:0,8,320	1/1:5,0:7:2.74:12,3,0	./.	./.	1/1:11,8:22:20.81:435,21,0	1/1:22,1:28:24.08:434,24,0	0/1:10,1:17:71.58:72,0,82	0/1:27,0:26:2.80:3,0,85	1/1:7,10:19:20.81:420,21,0	1/1:17,8:27:28.73:532,29,0	1/1:10,9:21:14.65:291,15,0	0/0:21,0:24:32.99:0,33,379	0/0:25,0:27:33.02:0,33,457	0/0:14,0:15:30.09:0,30,452	1/1:5,2:18:6.02:142,6,0	1/1:5,12:19:24.55:545,25,0	0/0:28,0:35:57.12:0,57,733	1/1:10,4:15:15.01:304,15,0	0/0:15,0:16:24.06:0,24,319	0/0:19,0:20:36.09:0,36,521	0/1:27,0:27:28.82:29,0,456	0/0:27,0:28:48.07:0,48,647	0/0:16,0:18:12.02:0,12,149	0/0:33,0:34:63.09:0,63,962	0/0:7,0:26:45.05:0,45,419	0/0:20,0:25:36.07:0,36,447	0/0:24,0:27:32.66:0,33,627	0/0:8,0:9:18.05:0,18,263
chr10	79848770	.	G	GTACA	5778.32	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=1.694;DP=711;FS=6.499;HRun=0;HaplotypeScore=145.3244;InbreedingCoeff=0.9899;MQ=66.66;MQ0=3;MQRankSum=0.749;QD=28.05;ReadPosRankSum=-0.406;VQSLOD=3.8257;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:26:14.70:201,15,0	0/0:10,0:10:21.07:0,21,338	0/0:25,0:22:14.22:0,14,239	0/0:25,0:21:17.64:0,18,228	0/0:27,0:27:63.20:0,63,985	0/0:3,0:24:57.07:0,57,531	0/0:23,0:24:48.15:0,48,744	0/0:38,0:38:42.13:0,42,625	0/0:22,0:22:51.16:0,51,797	0/0:21,0:21:30.18:0,30,749	0/0:23,0:23:39.09:0,39,557	1/1:8,28:37:45.15:1068,45,0	1/1:13,25:39:45.07:1077,45,0	1/1:6,15:22:36.12:868,36,0	0/0:20,0:20:42.14:0,42,676	0/0:24,0:23:54.17:0,54,844	0/0:24,0:24:48.15:0,48,743	0/0:16,0:16:33.11:0,33,531	0/0:22,0:21:21.07:0,21,338	0/0:35,0:35:81.26:0,81,1267	0/0:39,0:39:72.17:0,72,1052	1/1:11,21:32:39.13:940,39,0	1/1:8,21:31:33.11:795,33,0	1/1:13,6:19:39.12:829,39,0	0/0:24,0:24:51.17:0,51,821	0/0:19,0:19:54.15:0,54,784	0/0:29,0:29:60.12:0,60,857	0/0:14,0:14:27.07:0,27,409
chr10	79849184	.	GA	G	731.36	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.990;DP=661;FS=0.706;HRun=7;HaplotypeScore=66.5971;InbreedingCoeff=0.9894;MQ=73.65;MQ0=0;MQRankSum=-3.713;QD=24.38;ReadPosRankSum=0.543;VQSLOD=4.0247;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:81.18:826,81,0	0/0:13,0:13:39.12:0,39,491	0/0:12,0:12:29.76:0,30,339	0/0:17,0:17:24.45:0,24,378	0/0:30,0:30:84.27:0,84,1057	0/0:22,0:22:66.21:0,66,830	0/0:13,0:13:39.11:0,39,478	0/0:32,0:32:90.29:0,90,1132	0/0:26,0:26:78.25:0,78,981	0/0:40,0:40:99:0,102,1260	0/0:13,0:13:36.11:0,36,443	0/0:18,0:18:48.15:0,48,604	0/0:27,0:27:66.21:0,66,830	0/0:32,0:32:96.30:0,96,1193	0/0:27,0:27:78.25:0,78,980	0/0:27,0:27:75.23:0,75,931	0/0:26,0:26:72.23:0,72,906	0/0:16,0:16:42.13:0,42,527	0/0:21,0:21:57.17:0,57,704	0/0:29,0:29:81.25:0,81,1003	0/0:25,0:25:69.22:0,69,866	0/0:29,0:29:72.23:0,72,905	0/0:34,0:34:93.27:0,93,1140	0/0:20,0:20:60.19:0,60,755	0/0:21,0:21:60.19:0,60,755	0/0:24,0:24:57.18:0,57,716	0/0:30,0:29:75.24:0,75,943	0/0:7,0:7:18.06:0,18,226
chr10	79849813	.	CT	C	3880.96	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.790;DP=578;FS=17.908;HRun=8;HaplotypeScore=60.9610;InbreedingCoeff=0.9638;MQ=81.20;MQ0=0;MQRankSum=-3.980;QD=25.87;ReadPosRankSum=4.653;VQSLOD=2.3349;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:78.12:752,78,0	0/0:4,0:4:12.04:0,12,145	0/0:30,1:24:4.15:0,4,278	0/0:29,0:24:10.93:0,11,383	0/0:29,0:29:84.23:0,84,992	0/0:22,0:22:57.17:0,57,688	0/0:13,0:13:39.12:0,39,471	0/0:32,0:32:84.24:0,84,993	0/0:23,0:23:69.20:0,69,821	0/0:24,0:24:66.20:0,66,797	0/0:27,0:27:75.23:0,75,904	1/1:4,10:14:30.04:290,30,0	1/1:2,17:19:51.08:493,51,0	1/1:0,15:15:39.06:377,39,0	0/0:20,0:19:60.17:0,60,710	0/0:18,0:18:54.17:0,54,652	0/0:26,0:26:69.17:0,69,817	0/0:14,0:14:36.11:0,36,432	0/0:18,0:18:51.16:0,51,616	0/0:28,0:28:75.22:0,75,891	0/0:8,0:8:24.07:0,24,290	1/1:0,12:12:27.04:261,27,0	1/1:0,18:18:51.08:492,51,0	1/1:0,12:12:33.05:319,33,0	1/1:0,32:32:93.15:898,93,0	0/0:20,0:20:57.13:0,57,672	0/0:25,0:25:75.21:0,75,893	0/0:17,0:17:48.15:0,48,575
chr10	79851303	.	A	AG	4982.79	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.134;DP=637;FS=9.118;HRun=2;HaplotypeScore=73.2713;InbreedingCoeff=0.9987;MQ=88.19;MQ0=0;MQRankSum=-3.413;QD=39.23;ReadPosRankSum=2.990;VQSLOD=5.1173;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.18:0,60,729	0/0:8,0:8:24.08:0,24,297	0/0:32,0:32:74.42:0,74,986	0/0:16,0:17:41.47:0,41,465	0/0:38,0:38:99:0,111,1364	0/0:24,0:24:69.20:0,69,833	0/0:7,0:7:21.07:0,21,260	0/0:33,0:33:96.27:0,96,1149	0/0:21,0:21:63.19:0,63,769	0/0:25,0:25:72.22:0,72,883	0/0:21,0:21:63.15:0,63,752	1/1:0,18:18:51.17:733,51,0	1/1:0,19:19:48.16:690,48,0	1/1:2,16:18:45.15:647,45,0	0/0:19,0:19:54.17:0,54,669	0/0:18,0:18:51.14:0,51,608	0/0:31,0:31:90.20:0,90,1069	0/0:16,0:16:39.38:0,39,489	0/0:24,0:24:72.22:0,72,880	0/0:40,0:40:99:0,111,1375	0/0:13,0:13:36.08:0,36,411	1/1:1,24:25:69.23:992,69,0	1/1:1,25:26:75.23:1058,75,0	1/1:0,21:21:60.20:863,60,0	0/0:22,0:22:63.16:0,63,720	0/0:33,0:33:99:0,99,1226	0/0:28,0:28:81.22:0,81,984	0/0:19,0:19:54.15:0,54,645
chr10	79851651	.	T	TA	1964.80	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=-8.878;DP=478;FS=0.000;HRun=3;HaplotypeScore=46.4279;InbreedingCoeff=0.9804;MQ=64.24;MQ0=1;MQRankSum=-0.325;QD=25.85;ReadPosRankSum=2.902;VQSLOD=2.7581;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:4:12.04:0,12,143	0/0:17,0:11:17.25:0,17,243	0/0:14,0:10:11.25:0,11,113	0/0:30,0:30:87.12:0,87,924	0/0:19,0:19:48.10:0,48,546	0/0:17,0:18:41.50:0,42,513	0/0:20,0:20:45.07:0,45,494	0/0:14,0:14:39.09:0,39,434	0/0:29,0:29:81.21:0,81,916	0/0:17,0:17:42.08:0,42,456	1/1:0,8:9:21.07:272,21,0	1/1:1,13:14:27.09:360,27,0	1/1:1,13:14:33.11:439,33,0	0/0:13,0:13:39.09:0,39,442	0/0:18,0:18:45.24:0,45,553	0/0:29,0:29:84.22:0,84,977	0/0:16,0:16:42.03:0,42,439	0/0:22,0:22:54.06:0,54,578	0/0:35,0:35:99:0,102,1180	0/0:8,0:8:23.66:0,24,260	1/1:0,9:9:24.08:320,24,0	1/1:1,12:13:30.10:400,30,0	1/1:1,16:17:27.09:359,27,0	0/0:16,0:16:45.11:0,45,515	0/0:27,0:27:78.13:0,78,874	0/0:27,0:26:81.10:0,81,911	0/0:7,0:7:18.06:0,18,214
chr10	79852448	.	CCACACTCA	C	7691.11	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.676;DP=668;FS=13.965;HRun=0;HaplotypeScore=173.4908;InbreedingCoeff=0.9959;MQ=86.70;MQ0=0;MQRankSum=-15.225;QD=60.09;ReadPosRankSum=1.898;VQSLOD=4.2573;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:87.30:0,87,3791	0/0:14,0:14:36.12:0,36,1550	0/0:23,0:23:66.16:0,66,2587	0/0:27,0:27:81.19:0,81,3020	0/0:29,0:29:87.27:0,87,3773	0/0:29,0:29:84.29:0,84,3708	0/0:24,0:24:69.24:0,69,3035	0/0:22,0:22:60.21:0,60,2626	0/0:30,0:30:90.31:0,90,3948	0/0:24,0:24:72.25:0,72,3032	0/0:32,0:32:93.32:0,93,4040	1/1:1,23:24:57.20:1620,57,0	1/1:3,33:36:96.33:2693,96,0	1/1:2,15:17:45.15:1280,45,0	0/0:25,0:25:75.26:0,75,3345	0/0:17,0:17:51.16:0,51,1990	0/0:22,0:22:66.23:0,66,2737	0/0:9,0:9:27.09:0,27,1182	0/0:29,0:29:84.27:0,84,3424	0/0:25,0:25:72.25:0,72,3062	0/0:34,0:34:99:0,102,4374	1/1:1,20:21:36.12:1001,36,0	1/1:2,15:17:24.08:668,24,0	1/1:1,12:13:15.99:429,16,0	0/0:22,0:22:60.21:0,60,2598	0/0:24,0:24:69.24:0,69,3085	0/0:34,0:34:99:0,99,4225	0/0:9,0:9:21.07:0,21,806
chr10	79852587	.	G	GA	752.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.950;DP=628;FS=0.748;HRun=8;HaplotypeScore=63.0433;InbreedingCoeff=0.9877;MQ=71.83;MQ0=0;MQRankSum=-0.851;QD=25.08;ReadPosRankSum=-0.124;VQSLOD=4.2231;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:30:61.57:847,62,0	0/0:13,0:13:33.01:0,33,302	0/0:19,0:18:25.44:0,25,294	0/0:12,0:12:17.94:0,18,165	0/0:31,0:31:87.01:0,87,783	0/0:32,0:32:93.05:0,93,851	0/0:20,0:20:57:0,57,512	0/0:25,0:25:61.26:0,61,549	0/0:28,0:28:72.02:0,72,654	0/0:30,0:30:84.04:0,84,768	0/0:17,0:17:39.02:0,39,357	0/0:17,0:17:48.02:0,48,436	0/0:28,0:28:72.03:0,72,659	0/0:19,0:19:54.03:0,54,494	0/0:37,0:37:99:0,99,906	0/0:15,0:15:42.02:0,42,384	0/0:28,0:28:75:0,75,680	0/0:20,0:20:60.03:0,60,549	0/0:26,0:26:68.99:0,69,620	0/0:25,0:25:72.04:0,72,659	0/0:14,0:14:33:0,33,298	0/0:26,0:26:69:0,69,622	0/0:26,0:26:60.02:0,60,549	0/0:15,0:15:42.02:0,42,384	0/0:20,0:20:57.03:0,57,521	0/0:28,0:28:78.02:0,78,709	0/0:19,0:19:57.03:0,57,522	0/0:8,0:8:23.99:0,24,213
chr10	79853187	.	CTGTGTGTGTGTGTGTG	C	4157.03	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=7.637;DP=634;FS=9.711;HRun=0;HaplotypeScore=244.3760;InbreedingCoeff=0.8614;MQ=57.34;MQ0=17;MQRankSum=-6.179;QD=19.89;ReadPosRankSum=1.804;VQSLOD=1.1991;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:32:5.55:187,6,0	0/0:5,0:6:12.04:0,12,673	0/0:34,0:12:3.01:0,3,43	0/0:32,0:17:6.02:0,6,78	0/0:23,0:22:12.04:0,12,401	1/1:15,0:23:18.06:669,18,0	0/0:20,0:19:19.62:0,20,1363	0/0:23,0:21:12.10:0,12,226	0/0:24,0:23:33.11:0,33,1994	0/0:21,0:21:30.10:0,30,1536	0/0:13,0:13:15.05:0,15,860	1/1:22,11:33:17.53:786,18,0	1/1:11,9:21:21.07:898,21,0	1/1:23,0:24:17.28:403,17,0	0/0:22,0:23:42.14:0,42,2425	0/0:24,0:23:42.14:0,42,2386	0/0:26,0:29:42.14:0,42,2574	0/0:23,0:22:39.13:0,39,2489	0/0:25,0:25:17.27:0,17,885	0/0:28,0:28:44.17:0,44,2678	0/0:22,0:22:42.14:0,42,2473	1/1:14,6:22:9.03:354,9,0	1/1:13,5:18:5.70:262,6,0	1/1:17,4:21:6.02:262,6,0	1/1:5,0:15:9.03:335,9,0	0/0:21,0:20:30.10:0,30,1704	0/0:23,0:22:39.13:0,39,2420	0/0:9,0:8:24.08:0,24,1458
chr10	79853907	.	G	GAA	3654.03	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-1.709;DP=487;FS=0.000;HRun=8;HaplotypeScore=57.0802;InbreedingCoeff=0.9803;MQ=82.45;MQ0=0;MQRankSum=-1.403;QD=25.03;ReadPosRankSum=2.392;VQSLOD=2.6487;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:18:32.44:112,32,0	0/0:3,0:3:6:0,6,67	0/0:19,0:18:38.88:0,39,405	0/0:14,0:14:24.04:0,24,262	0/0:27,0:27:78.17:0,78,850	1/1:2,0:20:37.43:129,37,0	0/0:10,0:10:30.08:0,30,334	0/0:28,0:28:60.11:0,60,661	0/0:19,0:19:51.13:0,51,569	0/0:21,0:21:63.16:0,63,695	0/0:26,0:26:72.17:0,72,802	1/1:1,14:15:33.11:524,33,0	1/1:2,16:18:39.13:619,39,0	1/1:3,11:14:33.11:524,33,0	0/0:17,0:17:48.13:0,48,535	0/0:18,0:18:54.13:0,54,592	0/0:13,0:13:36.09:0,36,401	0/0:15,0:15:39.09:0,39,434	0/0:15,0:15:42.11:0,42,468	0/0:29,0:29:78.20:0,78,869	0/0:8,0:8:15.04:0,15,167	1/1:1,13:14:39.13:608,39,0	1/1:2,10:12:30.10:476,30,0	1/1:0,10:11:30.10:476,30,0	1/1:1,0:24:53.67:187,54,0	0/0:23,0:23:57.14:0,57,635	0/0:22,0:22:57.15:0,57,636	0/0:14,0:14:27.02:0,27,287
chr10	79854183	.	CAAAA	C	663.14	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.619;DP=583;FS=3.422;HRun=4;HaplotypeScore=95.0835;InbreedingCoeff=0.9982;MQ=73.31;MQ0=1;MQRankSum=-5.590;QD=26.53;ReadPosRankSum=-0.732;VQSLOD=-0.0361;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,17:25:30.25:758,30,0	0/0:13,0:13:39.13:0,39,1012	0/0:33,0:26:74.70:0,75,1399	0/0:30,0:22:60.65:0,61,1250	0/0:30,0:30:90.31:0,90,2554	0/0:24,0:24:72.24:0,72,1844	0/0:21,0:21:63.21:0,63,1625	0/0:29,0:29:87.29:0,87,2336	0/0:21,0:21:63.21:0,63,1675	0/0:18,0:18:54.18:0,54,1371	0/0:24,0:24:69.21:0,69,1676	0/0:30,0:30:90.31:0,90,2416	0/0:16,0:16:48.16:0,48,1268	0/0:13,0:13:39.13:0,39,1072	0/0:10,0:10:30.10:0,30,779	0/0:14,0:14:42.12:0,42,962	0/0:34,0:33:96.32:0,96,2402	0/0:18,0:19:50.57:0,51,1265	0/0:14,0:14:42.13:0,42,997	0/0:21,0:21:63.20:0,63,1615	0/0:11,0:11:33.11:0,33,820	0/0:18,0:18:54.18:0,54,1405	0/0:15,0:15:45.15:0,45,1245	0/0:13,0:13:39.13:0,39,1021	0/0:24,0:24:72.25:0,72,1995	0/0:20,0:20:60.18:0,60,1624	0/0:32,0:32:96.33:0,96,2613	0/0:11,0:11:33.11:0,33,738
chr10	79854853	.	CGTGTGTGT	C	853.36	PASS	AB=0.817;AC=12;AF=0.240;AN=50;BaseQRankSum=5.136;DP=484;FS=9.948;HRun=0;HaplotypeScore=120.1691;InbreedingCoeff=0.5964;MQ=67.91;MQ0=8;MQRankSum=-3.811;QD=7.42;ReadPosRankSum=-0.992;VQSLOD=1.6802;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:23:1.15:0,1,52	./.	./.	./.	0/0:12,0:17:3.49:0,3,64	0/1:13,0:14:6.39:6,0,103	0/0:19,0:19:18.14:0,18,793	0/0:16,0:15:9.48:0,9,170	0/0:12,0:12:9.03:0,9,367	0/0:11,0:11:15.05:0,15,375	0/0:8,0:9:12.04:0,12,398	1/1:13,8:21:8.69:223,9,0	1/1:12,5:17:6.02:149,6,0	1/1:9,7:16:9.03:223,9,0	0/0:22,0:21:14.88:0,15,405	0/0:18,0:17:15.05:0,15,595	0/0:25,0:22:28.89:0,29,1013	0/0:15,0:14:15.03:0,15,506	0/0:20,0:19:21.95:0,22,454	0/0:11,0:11:6:0,6,56	0/0:34,0:33:36.09:0,36,1002	0/1:12,9:21:0.53:174,0,1	1/1:4,7:11:5.57:148,6,0	1/1:14,0:15:8.78:79,9,0	0/0:15,0:19:9.01:0,9,94	0/0:14,0:13:3.01:0,3,68	0/0:10,0:13:21.05:0,21,645	0/0:9,0:9:15.05:0,15,270
chr10	79855527	.	G	GA	909.23	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.886;DP=626;FS=0.657;HRun=8;HaplotypeScore=58.7762;InbreedingCoeff=0.8890;MQ=74.70;MQ0=0;MQRankSum=-1.273;QD=26.74;ReadPosRankSum=0.999;VQSLOD=4.3277;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:87.01:0,87,790	0/0:5,0:5:15.01:0,15,137	0/0:17,0:17:31.54:0,32,300	0/0:7,0:7:6.07:0,6,121	0/0:27,0:28:63.43:0,63,667	1/1:3,31:34:87.26:1004,87,0	0/0:16,0:16:36:0,36,325	0/0:31,0:31:87.05:0,87,796	0/0:24,0:24:66.03:0,66,604	0/0:28,0:28:84.05:0,84,769	0/0:28,0:28:77.99:0,78,699	0/0:21,0:21:60.03:0,60,549	0/0:20,0:20:60.03:0,60,548	0/0:33,0:33:90.02:0,90,818	0/0:20,0:20:45.01:0,45,412	0/0:14,0:14:33:0,33,297	0/0:23,0:23:60.02:0,60,549	0/0:16,0:16:45.02:0,45,412	0/0:25,0:25:54:0,54,491	0/0:37,0:37:99:0,99,901	0/0:15,0:15:39.01:0,39,356	0/0:23,0:23:63.02:0,63,572	0/0:20,0:21:56.05:0,56,500	0/0:12,0:12:36.02:0,36,330	0/0:29,0:29:81.04:0,81,741	0/0:22,0:22:63.01:0,63,571	0/0:33,1:35:60.40:0,60,779	0/0:7,0:7:21.01:0,21,192
chr10	79855911	.	GAA	G	652.48	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.564;DP=681;FS=5.194;HRun=10;HaplotypeScore=91.1073;InbreedingCoeff=0.8920;MQ=76.67;MQ0=0;MQRankSum=-3.667;QD=24.17;ReadPosRankSum=1.203;VQSLOD=3.4806;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:27:68.92:747,69,0	0/0:13,0:13:39.13:0,39,615	0/0:18,0:18:30.02:0,30,438	0/0:11,0:10:11.98:0,12,140	0/0:32,0:34:98.81:0,99,1488	0/0:30,0:32:86.73:0,87,1295	0/0:23,0:24:66.19:0,66,984	0/0:28,0:30:84.27:0,84,1292	0/0:20,0:21:50.66:0,51,769	0/0:27,0:27:69.24:0,69,1093	0/0:35,0:36:93.31:0,93,1448	0/0:26,1:27:32.75:0,33,921	0/0:29,0:29:84.29:0,84,1329	0/0:31,0:32:86.78:0,87,1341	0/0:26,0:27:80.72:0,81,1218	0/0:15,0:16:41.61:0,42,603	0/0:21,0:21:60.20:0,60,940	0/0:4,0:4:12.04:0,12,188	0/0:28,0:28:72.25:0,72,1139	0/0:31,0:32:90.30:0,90,1407	0/0:21,0:21:51.15:0,51,761	0/0:26,0:26:72.25:0,72,1142	0/0:30,0:30:87.30:0,87,1376	0/0:33,0:35:89.28:0,89,1350	0/0:19,0:19:57.19:0,57,902	0/0:29,0:31:83.21:0,83,1207	0/0:25,0:25:72.24:0,72,1129	0/0:4,0:4:9.03:0,9,143
chr10	79855999	.	TA	T	209.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.641;DP=554;FS=12.618;HRun=3;HaplotypeScore=64.3392;InbreedingCoeff=0.9826;MQ=82.41;MQ0=0;MQRankSum=-3.912;QD=14.93;ReadPosRankSum=-0.856;VQSLOD=1.7907;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:14:34.70:304,35,0	0/0:12,0:12:33.09:0,33,438	0/0:15,1:15:16.41:0,16,350	0/0:18,0:17:32.03:0,32,408	0/0:33,0:33:95.98:0,96,1248	0/0:25,0:25:75.24:0,75,1057	0/0:17,0:17:48.13:0,48,637	0/0:28,0:28:78.21:0,78,1022	0/0:17,0:17:45.13:0,45,610	0/0:29,0:29:78.26:0,78,1120	0/0:25,0:25:72.21:0,72,996	0/0:18,0:18:54.15:0,54,753	0/0:19,0:19:54.15:0,54,739	0/0:13,0:13:39.12:0,39,544	0/0:15,0:15:42.08:0,42,559	0/0:24,0:24:72.21:0,72,999	0/0:22,0:22:63.17:0,63,851	0/0:8,0:8:24.08:0,24,335	0/0:24,0:24:66.18:0,66,881	0/0:28,0:28:84.26:0,84,1150	0/0:10,0:10:27.09:0,27,387	0/0:12,0:12:36.11:0,36,499	0/0:25,0:25:69.21:0,69,959	0/0:18,0:18:54.04:0,54,677	0/0:26,0:26:75.23:0,75,1042	0/0:28,0:28:78.20:0,78,1032	0/0:22,0:21:63.21:0,63,890	0/0:8,0:8:24.08:0,24,333
chr10	79856625	.	TGTATA	T	8654.36	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.304;DP=556;FS=3.149;HRun=0;HaplotypeScore=109.5474;InbreedingCoeff=0.9997;MQ=85.99;MQ0=0;MQRankSum=-7.641;QD=55.48;ReadPosRankSum=4.297;VQSLOD=5.1989;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:51.15:0,51,1543	0/0:9,0:9:27.09:0,27,856	0/0:22,0:22:63.05:0,63,1875	0/0:17,0:17:36.66:0,37,1093	0/0:27,0:27:81.21:0,81,2321	0/0:30,0:30:87.28:0,87,2644	0/0:16,0:16:48.15:0,48,1381	0/0:33,0:33:90.30:0,90,2688	0/0:15,0:15:45.14:0,45,1357	0/0:17,0:17:45.15:0,45,1310	0/0:22,0:22:63.20:0,63,1808	1/1:0,25:25:66.07:1432,66,0	1/1:1,26:27:63.22:1365,63,0	1/1:0,18:19:54.19:1172,54,0	0/0:14,0:14:42.14:0,42,1287	0/0:17,0:17:48.15:0,48,1401	0/0:14,0:14:42.13:0,42,1208	0/0:12,0:12:36.12:0,36,1135	0/0:20,0:20:51.18:0,51,1578	0/0:27,0:27:72.25:0,72,2281	0/0:14,0:14:39.10:0,39,1095	1/1:3,20:23:54.10:1117,54,0	1/1:2,17:19:48.16:1041,48,0	1/1:1,15:16:45.15:977,45,0	1/1:0,27:27:72.25:1552,72,0	0/0:17,0:17:51.18:0,51,1537	0/0:21,0:21:63.22:0,63,1998	0/0:16,0:16:45.15:0,45,1427
chr10	79856994	.	ATCTCTC	A	888.04	PASS	AB=0.958;AC=6;AF=0.107;AN=56;BaseQRankSum=2.863;DP=631;FS=8.192;HRun=0;HaplotypeScore=146.6730;InbreedingCoeff=0.6345;MQ=71.02;MQ0=8;MQRankSum=-1.409;QD=9.35;ReadPosRankSum=0.111;VQSLOD=2.3002;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:31:0:0,0,0	0/0:8,0:8:18.06:0,18,469	0/0:26,0:19:8.62:0,9,91	0/0:40,0:20:6.49:0,6,76	0/0:16,0:17:29.31:0,29,828	0/0:20,0:26:9.03:0,9,219	0/0:15,0:17:30.08:0,30,628	0/0:36,0:34:33.07:0,33,532	0/0:12,0:21:21.04:0,21,364	1/1:6,15:21:45.12:808,45,0	1/1:12,7:20:11.98:164,12,0	0/0:22,0:23:36.12:0,36,961	0/0:28,0:29:43.64:0,44,1152	0/0:17,0:18:27.09:0,27,609	0/0:33,0:34:51.15:0,51,1217	0/0:11,0:17:39.04:0,39,838	0/0:15,0:15:21.07:0,21,583	0/0:8,0:8:15.05:0,15,312	0/1:20,1:21:40.48:40,0,412	0/0:35,0:36:54.14:0,54,1037	0/0:22,0:22:27.09:0,27,698	0/0:19,0:19:32.59:0,33,734	0/0:15,0:16:18.06:0,18,470	0/0:16,0:19:29.22:0,29,662	0/0:21,0:21:6.19:0,6,589	0/0:17,0:25:35.39:0,35,755	0/0:24,0:27:47.48:0,47,989	0/0:16,0:16:12.04:0,12,276
chr10	79857854	.	AACACACAC	A	359.06	PASS	AB=0.833;AC=13;AF=0.260;AN=50;BaseQRankSum=3.268;DP=498;FS=1.457;HRun=0;HaplotypeScore=120.3713;InbreedingCoeff=0.5797;MQ=71.20;MQ0=10;MQRankSum=-2.854;QD=2.74;ReadPosRankSum=0.408;VQSLOD=2.4789;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:2.50:0,2,9	0/0:6,0:7:15.03:0,15,416	./.	./.	0/0:13,0:13:9.50:0,10,292	0/1:16,4:20:35.86:66,0,36	0/0:21,0:24:15.52:0,16,510	0/0:19,0:19:1.25:0,1,3	0/0:15,0:16:17.96:0,18,405	0/0:7,0:7:9.03:0,9,308	0/0:11,0:10:12.04:0,12,432	1/1:7,5:11:3.01:72,3,0	./.	1/1:12,2:14:3.01:71,3,0	0/0:8,0:8:12.49:0,12,222	0/0:12,0:15:18.04:0,18,351	0/0:19,0:19:21.07:0,21,777	0/0:14,0:15:30.10:0,30,734	0/0:16,0:16:12.04:0,12,428	0/0:18,0:18:12.04:0,12,301	0/0:26,0:26:21.07:0,21,544	1/1:19,4:23:3:70,3,0	1/1:11,3:14:5.04:42,5,0	1/1:24,7:30:3:74,3,0	1/1:16,0:17:6.01:105,6,0	0/0:13,0:13:16.86:0,17,293	0/0:17,0:17:27.09:0,27,746	0/0:5,0:8:12.51:0,13,272
chr10	79858010	.	TTTTGTTTTGTTTTG	T	10959.94	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.442;DP=632;FS=8.981;HRun=0;HaplotypeScore=229.7365;InbreedingCoeff=0.9792;MQ=62.97;MQ0=2;MQRankSum=-13.173;QD=52.95;ReadPosRankSum=6.249;VQSLOD=3.0194;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,24:32:16.02:1341,16,0	0/0:12,0:12:36.12:0,36,2148	0/0:35,0:25:69.24:0,69,3198	0/0:37,0:24:47.44:0,47,2520	0/0:21,0:21:57.20:0,57,3552	1/1:3,24:27:42.14:1687,42,0	0/0:29,0:29:72.23:0,72,4188	0/0:21,0:21:51.16:0,51,2285	0/0:17,0:17:51.18:0,51,2919	0/0:26,0:26:75.26:0,75,4135	0/0:18,0:18:42.14:0,42,2260	1/1:5,22:26:30.10:1209,30,0	1/1:4,17:21:51.17:2087,51,0	1/1:9,10:19:15.05:619,15,0	0/0:21,0:21:63.21:0,63,3737	0/0:20,0:20:57.20:0,57,3162	0/0:16,0:16:39.13:0,39,2040	0/0:17,0:16:48.16:0,48,2564	0/0:18,0:18:51.18:0,51,2781	0/0:36,0:36:96.30:0,96,5647	0/0:18,0:18:48.16:0,48,2884	1/1:8,20:28:45.15:1681,45,0	1/1:2,18:20:30.03:1104,30,0	1/1:4,12:16:6.59:367,7,0	1/1:4,13:17:21.07:866,21,0	0/0:28,0:28:66.23:0,66,4006	0/0:26,0:26:75.26:0,75,4753	0/0:9,0:9:21.07:0,21,1083
chr10	79858497	.	C	CG	9885.89	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=17.654;DP=644;FS=5.688;HRun=1;HaplotypeScore=86.9120;InbreedingCoeff=0.9993;MQ=85.10;MQ0=0;MQRankSum=-1.891;QD=40.68;ReadPosRankSum=5.282;VQSLOD=5.0576;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:78.26:1169,78,0	0/0:14,0:14:42.14:0,42,545	0/0:16,0:16:47.74:0,48,505	0/0:23,0:23:58.38:0,58,665	0/0:29,0:29:87.24:0,87,1087	1/1:0,21:21:60.20:898,60,0	0/0:18,0:18:51.17:0,51,662	0/0:28,0:27:84.26:0,84,1067	0/0:21,0:21:54.16:0,54,688	0/0:34,0:34:92.96:0,93,1152	0/0:31,0:31:93.25:0,93,1150	1/1:3,30:33:90.30:1347,90,0	1/1:2,27:29:42.80:1130,43,0	1/1:0,22:22:60.20:891,60,0	0/0:19,0:19:54.15:0,54,673	0/0:22,0:22:66.17:0,66,836	0/0:23,0:23:69.16:0,69,861	0/0:7,0:7:21.05:0,21,253	0/0:19,0:19:51.17:0,51,662	0/0:24,0:24:72.02:0,72,906	0/0:11,0:11:33.11:0,33,428	1/1:1,23:24:63.21:942,63,0	1/1:0,26:26:69.23:1030,69,0	1/1:3,30:33:96.30:1400,96,0	1/1:0,26:26:72.24:1079,72,0	0/0:23,0:23:69.22:0,69,884	0/0:26,0:25:75.24:0,75,973	0/0:13,0:13:39.13:0,39,506
chr10	79859955	.	T	TG	8296.98	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-16.475;DP=631;FS=5.504;HRun=0;HaplotypeScore=54.0727;InbreedingCoeff=0.9991;MQ=90.42;MQ0=0;MQRankSum=-1.464;QD=43.67;ReadPosRankSum=5.080;VQSLOD=5.0046;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:69.24:1103,69,0	0/0:10,0:10:30.09:0,30,401	0/0:29,0:29:87.27:0,87,1185	0/0:20,0:20:60.15:0,60,798	0/0:31,0:31:90.30:0,90,1258	1/1:0,28:28:75.26:1199,75,0	0/0:11,0:11:30.10:0,30,420	0/0:36,0:36:99:0,99,1370	0/0:21,0:21:63.21:0,63,881	0/0:32,0:32:93.31:0,93,1301	0/0:24,0:24:72.21:0,72,971	1/1:0,14:14:39.13:624,39,0	1/1:0,20:20:57.19:911,57,0	1/1:0,21:21:54.18:863,54,0	0/0:20,0:20:60.20:0,60,839	0/0:12,0:12:36.12:0,36,501	0/0:29,0:29:87.29:0,87,1214	0/0:12,0:12:36.08:0,36,478	0/0:17,0:17:51.14:0,51,693	0/0:41,0:41:99:0,123,1705	0/0:19,0:19:54.18:0,54,754	1/1:1,20:21:51.17:815,51,0	1/1:1,27:28:78.27:1247,78,0	1/1:0,16:16:45.15:719,45,0	1/1:2,17:19:51.17:815,51,0	0/0:38,0:38:99:0,114,1558	0/0:31,0:31:90.29:0,90,1241	0/0:8,0:8:21.06:0,21,277
chr10	79861163	.	T	TAC	408.07	PASS	AC=4;AF=0.091;AN=44;BaseQRankSum=-3.615;DP=177;FS=10.021;HRun=0;HaplotypeScore=27.8899;InbreedingCoeff=0.4922;MQ=60.57;MQ0=4;MQRankSum=0.004;QD=31.39;ReadPosRankSum=1.385;VQSLOD=4.5683;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:2,0:2:6.02:0,6,80	0/0:7,0:3:3.01:0,3,40	0/0:13,0:5:1.53:0,2,28	0/0:16,0:16:36.10:0,36,463	0/0:3,0:3:3:0,3,25	0/0:4,0:4:12.04:0,12,160	0/0:25,0:24:63.18:0,63,799	0/0:3,0:3:9.03:0,9,120	0/0:12,0:12:33.10:0,33,415	0/0:7,0:7:21.07:0,21,279	./.	0/0:1,0:1:3:0,3,25	./.	0/0:2,0:2:6.02:0,6,80	0/0:4,0:4:12.04:0,12,160	0/0:16,0:16:46.95:0,47,587	0/0:14,0:14:39.13:0,39,517	0/0:16,0:13:33.10:0,33,420	0/0:3,0:3:9.03:0,9,120	0/0:1,0:1:3.01:0,3,40	./.	./.	./.	0/0:2,0:2:3.01:0,3,40	1/1:1,6:7:18.06:309,18,0	0/0:8,0:8:21.02:0,21,244	1/1:0,6:6:12.04:208,12,0
chr10	79861982	.	TTG	T	286.37	PASS	AB=0.898;AC=13;AF=0.260;AN=50;BaseQRankSum=7.081;DP=534;FS=0.677;HRun=0;HaplotypeScore=71.9248;InbreedingCoeff=-0.0551;MQ=59.18;MQ0=8;MQRankSum=0.556;QD=1.31;ReadPosRankSum=1.867;VQSLOD=1.3685;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,2:15:11.86:111,12,0	0/0:6,0:6:11.52:0,12,134	./.	./.	0/0:25,1:29:4.18:0,4,422	1/1:16,0:25:22.73:112,23,0	0/0:14,0:13:12.03:0,12,150	0/0:27,0:25:2.97:0,3,20	0/0:10,0:10:3.01:0,3,45	0/0:23,0:23:1.48:0,1,106	0/1:14,4:18:30.17:30,0,248	0/0:18,0:18:7.33:0,7,175	0/1:22,0:21:8.67:9,0,205	0/1:17,2:19:14.59:15,0,163	0/0:10,0:10:20.91:0,21,221	0/0:14,0:13:14.97:0,15,163	0/0:18,0:17:12.03:0,12,157	0/1:12,1:13:46.80:47,0,99	0/0:26,0:26:9.75:0,10,167	0/1:25,3:28:21.25:21,0,474	0/0:23,0:22:11.59:0,12,215	0/1:13,1:14:14.45:14,0,204	0/1:16,0:16:9.97:10,0,195	0/1:20,4:24:8.56:9,0,235	0/0:25,1:27:15.53:0,16,546	0/1:14,0:22:27.32:54,0,27	0/0:27,2:29:0.50:0,0,365	./.
chr10	79863531	.	G	GA	1326.55	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=4.690;DP=393;FS=11.464;HRun=6;HaplotypeScore=45.2077;InbreedingCoeff=0.7062;MQ=74.87;MQ0=2;MQRankSum=-4.804;QD=21.40;ReadPosRankSum=1.782;VQSLOD=1.9586;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:69.22:868,69,0	0/0:4,0:4:12.03:0,12,122	0/0:22,0:20:14.58:0,15,283	0/1:18,0:16:59.72:60,0,222	0/0:14,0:14:33.06:0,33,331	1/1:1,17:18:42.13:528,42,0	0/0:8,0:8:24.04:0,24,237	0/0:19,0:18:45.09:0,45,454	0/0:17,0:17:48.11:0,48,489	0/0:9,0:9:21.05:0,21,214	0/0:15,0:15:39.09:0,39,398	0/0:12,0:12:36.08:0,36,367	0/0:12,0:12:36.07:0,36,360	0/0:11,0:11:30.07:0,30,306	0/0:10,0:9:30.05:0,30,299	0/0:4,0:4:9.02:0,9,91	0/0:11,0:11:33.06:0,33,330	0/0:8,0:8:18.02:0,18,176	0/0:14,0:14:36.07:0,36,364	0/0:29,0:29:75.17:0,75,765	0/0:8,0:8:21.05:0,21,214	0/0:13,0:13:36.07:0,36,360	0/0:13,0:13:39.09:0,39,398	0/0:16,0:16:39.09:0,39,398	0/0:15,0:14:39.06:0,39,382	0/0:19,0:19:45.09:0,45,459	0/0:23,0:23:63.11:0,63,628	0/0:3,0:3:6.01:0,6,61
chr10	79864522	.	G	GACA	2678.68	PASS	AB=0.748;AC=9;AF=0.161;AN=56;BaseQRankSum=9.101;DP=616;FS=1.470;HRun=0;HaplotypeScore=118.3087;InbreedingCoeff=0.4074;MQ=65.95;MQ0=4;MQRankSum=-1.846;QD=19.70;ReadPosRankSum=2.643;VQSLOD=3.7244;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:17.72:0,18,571	0/0:9,0:9:27.09:0,27,478	0/0:36,0:34:93.23:0,93,1382	0/0:23,0:19:56.70:0,57,814	0/0:34,0:34:95.34:0,95,1623	0/0:17,0:17:24.83:0,25,330	0/0:26,0:26:78.24:0,78,1332	0/0:18,0:17:48.15:0,48,777	0/0:20,0:20:60.19:0,60,1054	0/0:25,0:25:72.23:0,72,1209	0/0:18,0:18:54.14:0,54,848	1/1:11,6:17:14.83:501,15,0	0/1:9,13:23:15.78:709,0,16	0/1:14,11:25:8.28:606,0,8	0/0:9,0:9:27.09:0,27,492	0/0:9,0:9:27.08:0,27,461	0/0:27,0:27:74.25:0,74,1253	0/0:18,0:18:54.17:0,54,953	0/0:20,0:19:57.17:0,57,929	0/0:31,0:31:90.26:0,90,1464	0/0:45,0:44:99:0,132,2272	1/1:7,4:11:2.70:242,3,0	0/1:14,7:21:9.04:302,0,9	0/1:10,8:18:2.46:453,0,2	0/1:20,0:20:3.24:3,0,258	0/0:25,0:25:70.81:0,71,472	0/0:23,0:23:69.24:0,69,1284	0/0:13,0:13:32.98:0,33,284
chr10	79864523	.	G	GA	816.85	PASS	AB=0.700;AC=6;AF=0.107;AN=56;BaseQRankSum=11.527;DP=618;FS=7.084;HRun=0;HaplotypeScore=101.5124;InbreedingCoeff=-0.1179;MQ=65.14;MQ0=4;MQRankSum=-0.404;QD=7.10;ReadPosRankSum=5.912;VQSLOD=2.4077;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:60.96:0,61,397	0/0:9,0:9:27.09:0,27,377	0/0:35,0:33:90.12:0,90,1140	0/0:23,0:19:57.17:0,57,721	0/0:34,0:34:96.30:0,96,1309	0/0:17,0:17:45.65:0,46,231	0/0:25,0:25:75.23:0,75,1031	0/0:17,0:16:48.15:0,48,655	0/0:20,0:20:60.20:0,60,839	0/0:25,0:25:69.02:0,69,934	0/0:18,0:18:51.17:0,51,711	0/1:10,6:16:60.79:130,0,61	0/1:9,14:23:32.89:275,0,33	0/1:13,11:24:33.19:218,0,33	0/0:9,0:9:27.09:0,27,378	0/0:10,0:10:27.09:0,27,378	0/0:26,0:26:73.93:0,74,968	0/0:18,0:18:51.17:0,51,713	0/0:22,0:21:57.17:0,57,778	0/0:32,0:32:87.28:0,87,1197	0/0:45,0:44:99:0,129,1800	0/1:7,4:11:23.26:76,0,23	0/1:15,8:22:61.75:92,0,62	0/1:10,8:18:30.95:151,0,31	0/0:20,0:20:38.29:0,38,195	0/0:25,0:25:64.57:0,65,284	0/0:23,0:23:69.23:0,69,964	0/0:15,0:15:31.58:0,32,167
chr10	79864584	.	G	GA	3666.11	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-4.382;DP=543;FS=7.139;HRun=9;HaplotypeScore=70.4673;InbreedingCoeff=0.9639;MQ=67.00;MQ0=1;MQRankSum=-0.793;QD=25.28;ReadPosRankSum=1.168;VQSLOD=4.3365;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,880	0/0:7,0:7:18:0,18,156	0/0:8,0:7:14.88:0,15,117	0/0:10,0:9:14.36:0,14,111	0/0:37,1:38:56.77:0,57,721	1/1:5,11:16:30.08:332,30,0	0/0:20,0:20:50.97:0,51,443	0/0:26,0:26:71.98:0,72,625	0/0:1,0:17:32.59:0,33,96	0/0:20,0:20:47.98:0,48,417	0/0:25,0:25:65.98:0,66,573	1/1:2,11:13:7.03:306,7,0	1/1:5,17:22:57.14:621,57,0	1/1:2,24:26:63.17:695,63,0	0/0:13,0:13:38.98:0,39,335	0/0:10,0:11:32.03:0,32,266	0/0:20,0:20:53.99:0,54,469	0/0:13,0:13:32.99:0,33,286	0/0:20,0:20:53.98:0,54,469	0/0:19,0:19:15.88:0,16,309	0/0:20,0:20:47.96:0,48,417	1/1:2,9:11:27.03:285,27,0	1/1:6,17:23:51.14:564,51,0	1/1:1,9:10:24.06:265,24,0	1/1:1,22:24:54.15:597,54,0	0/0:7,0:38:53.96:0,54,184	0/0:28,0:28:56:0,56,474	0/0:3,0:9:8.14:0,8,24
chr10	79864765	.	CGT	C	2997.21	PASS	AB=0.709;AC=37;AF=0.712;AN=52;BaseQRankSum=-0.263;DP=623;FS=3.723;HRun=0;HaplotypeScore=123.3137;InbreedingCoeff=-0.3631;MQ=55.62;MQ0=8;MQRankSum=0.087;QD=5.10;ReadPosRankSum=3.175;VQSLOD=2.7191;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:4.64:5,0,35	1/1:4,3:7:3.01:34,3,0	./.	./.	1/1:11,10:21:12.03:136,12,0	0/1:12,0:12:42.38:42,0,83	0/1:19,2:21:20.71:178,0,21	1/1:22,9:30:26.12:226,26,0	1/1:13,11:27:19.86:229,20,0	1/1:6,7:14:20.82:206,21,0	1/1:5,12:17:15.04:169,15,0	1/1:3,0:20:7.54:103,8,0	0/1:6,0:23:20.44:56,0,20	0/1:4,0:26:6.75:74,0,7	1/1:10,13:23:20.53:193,21,0	0/1:5,8:13:27.86:152,0,28	0/1:15,11:26:3.24:151,0,3	0/1:19,4:23:24.38:230,0,24	1/1:11,8:17:15.04:164,15,0	1/1:9,12:21:11.77:114,12,0	0/1:36,33:68:54.88:294,0,55	1/1:6,0:19:10.55:47,11,0	0/1:15,0:21:18.39:18,0,112	0/1:10,0:35:8.95:19,0,9	0/1:5,0:18:7.44:31,0,7	0/1:9,0:23:38.52:47,0,39	0/1:9,10:20:22.81:167,0,23	0/1:3,0:14:20.29:64,0,20
chr10	79866691	.	AAC	A	399.49	PASS	AB=0.896;AC=9;AF=0.173;AN=52;BaseQRankSum=4.057;DP=479;FS=7.708;HRun=0;HaplotypeScore=60.7102;InbreedingCoeff=0.0346;MQ=64.75;MQ0=10;MQRankSum=0.496;QD=3.15;ReadPosRankSum=0.092;VQSLOD=0.4885;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,11:21:18.05:198,18,0	0/0:2,0:2:3.01:0,3,44	./.	./.	0/1:15,0:15:4.79:5,0,292	0/0:13,0:24:9:0,9,78	0/1:8,1:9:24.03:24,0,81	0/0:16,0:16:12.04:0,12,175	0/1:9,2:11:24.02:24,0,81	0/0:23,0:22:15.91:0,16,347	0/1:19,0:19:2.93:3,0,350	0/0:12,0:14:12.93:0,13,326	0/0:14,0:14:12.03:0,12,163	0/0:10,0:10:21.05:0,21,290	0/1:11,1:12:18.06:18,0,137	0/0:13,0:13:12.03:0,12,157	0/0:17,0:17:18.04:0,18,246	0/0:9,0:9:18.02:0,18,245	0/0:10,0:10:12.04:0,12,180	0/1:18,1:19:11.99:12,0,247	0/0:27,1:28:4.95:0,5,502	0/0:17,0:17:9.03:0,9,125	0/0:9,0:20:15:0,15,131	0/0:23,0:23:30.08:0,30,424	0/1:10,11:21:15.15:248,0,15	0/0:14,0:22:33.04:0,33,356	0/0:17,0:17:15.03:0,15,199	0/0:3,0:11:20.99:0,21,180
chr10	79872661	.	G	GA	6157.14	PASS	AB=0.873;AC=21;AF=0.500;AN=42;BaseQRankSum=19.640;DP=1151;FS=3.355;HRun=1;HaplotypeScore=195.5585;InbreedingCoeff=-0.2435;MQ=47.41;MQ0=32;MQRankSum=-4.803;QD=6.55;ReadPosRankSum=8.887;VQSLOD=1.5261;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:33:90.30:1349,90,0	0/1:27,5:30:96.57:97,0,919	0/0:44,0:34:99:0,99,1332	0/0:58,0:43:99:0,117,1590	0/0:60,0:49:99:0,114,1588	./.	0/0:48,0:45:99:0,123,1718	0/1:77,9:70:73.37:73,0,2316	0/1:64,15:71:99:399,0,1748	0/1:65,14:76:99:360,0,2334	0/1:45,9:52:99:238,0,1249	./.	./.	./.	0/1:40,7:46:99:181,0,1416	0/1:30,3:32:46.72:47,0,1001	0/1:70,8:77:99:153,0,2330	0/1:42,7:45:99:195,0,1259	0/1:68,7:67:74.09:74,0,2319	0/1:48,9:51:99:174,0,1532	0/1:108,20:124:99:512,0,3639	./.	./.	./.	1/1:0,12:12:36.12:541,36,0	1/1:2,17:18:12.23:725,12,0	0/1:50,14:62:99:453,0,1745	1/1:1,13:13:39.13:586,39,0
chr10	79882070	.	CGTAATA	C	902.26	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=4.533;DP=179;FS=3.841;HRun=0;HaplotypeScore=38.9966;InbreedingCoeff=0.7232;MQ=88.56;MQ0=1;MQRankSum=-3.728;QD=15.29;ReadPosRankSum=1.970;VQSLOD=1.7548;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:11.80:77,12,0	0/0:2,0:2:5.98:0,6,131	0/0:9,0:9:13.22:0,13,154	0/0:9,0:7:11.14:0,11,116	0/0:6,0:6:17.96:0,18,158	1/1:0,9:9:9.03:223,9,0	0/0:3,0:3:8.89:0,9,65	0/0:17,0:17:50.63:0,51,473	0/0:6,0:6:17.99:0,18,315	0/0:3,0:3:9:0,9,81	0/0:4,0:4:12:0,12,114	1/1:0,0:4:3.01:55,3,0	1/1:0,0:3:3.01:55,3,0	1/1:0,0:7:6.02:108,6,0	0/0:5,0:5:11.99:0,12,107	0/0:2,0:2:6.02:0,6,106	0/0:8,0:8:23.94:0,24,695	0/0:11,0:11:26.92:0,27,302	0/0:12,0:12:35.61:0,36,275	0/0:4,0:4:11.92:0,12,88	0/0:3,0:3:9.01:0,9,91	1/1:3,0:3:2.92:17,3,0	1/1:1,0:1:2.94:18,3,0	1/1:0,0:2:2.92:17,3,0	1/1:5,0:5:14.75:95,15,0	1/1:0,5:6:18.03:277,18,0	0/0:16,0:16:6:0,6,336	1/1:0,12:13:4.52:147,5,0
chr10	79882071	.	GTAA	G	1014.07	PASS	AC=30;AF=0.833;AN=36;BaseQRankSum=1.706;DP=178;FS=5.472;HRun=0;HaplotypeScore=30.1933;InbreedingCoeff=0.4135;MQ=88.69;MQ0=1;MQRankSum=-0.587;QD=8.52;ReadPosRankSum=-0.123;VQSLOD=1.3077;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:2,0:2:3.01:0,3,58	./.	./.	1/1:4,2:6:6.02:79,6,0	1/1:9,0:9:8.93:62,9,0	./.	1/1:19,0:19:6.01:67,6,0	0/0:6,0:6:6.02:0,6,115	./.	1/1:2,2:4:6.02:79,6,0	1/1:4,0:4:2.98:21,3,0	1/1:3,0:3:2.98:21,3,0	1/1:7,0:7:5.94:41,6,0	1/1:2,2:4:3.01:40,3,0	1/1:2,0:2:3.01:39,3,0	0/0:8,0:8:18.06:0,18,344	1/1:3,8:11:18.06:237,18,0	1/1:11,1:12:3.01:40,3,0	./.	1/1:1,2:3:6.02:79,6,0	./.	./.	./.	./.	1/1:6,0:6:1.15:35,1,0	1/1:10,5:16:18.03:217,18,0	1/1:13,0:13:8.96:72,9,0
chr10	79882638	.	GA	G	4727.04	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.590;DP=488;FS=3.758;HRun=7;HaplotypeScore=63.0236;InbreedingCoeff=0.9814;MQ=80.17;MQ0=0;MQRankSum=-2.207;QD=25.97;ReadPosRankSum=3.676;VQSLOD=5.6400;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:96.22:978,96,0	0/0:6,0:6:15.05:0,15,188	0/0:24,1:22:47.71:0,48,526	0/0:24,0:24:37.60:0,38,623	0/0:26,0:26:75.23:0,75,927	1/1:2,19:21:51.11:520,51,0	0/0:16,0:16:39.12:0,39,491	0/0:22,0:22:63.20:0,63,793	0/0:23,0:23:63.16:0,63,754	0/0:11,0:11:30.10:0,30,377	0/0:12,0:12:33.11:0,33,415	1/1:2,17:19:48.11:490,48,0	1/1:0,15:16:33.44:445,33,0	1/1:3,15:18:42.09:428,42,0	0/0:20,0:20:57.16:0,57,692	0/0:16,0:16:45.14:0,45,566	0/0:15,0:15:45.14:0,45,566	0/0:9,0:9:21.07:0,21,264	0/0:18,0:18:45.13:0,45,554	0/0:13,0:13:39.12:0,39,490	0/0:30,0:30:78.25:0,78,980	1/1:0,13:13:33.07:336,33,0	1/1:1,10:11:27.06:275,27,0	1/1:3,21:24:54.11:551,54,0	1/1:0,9:9:24.05:245,24,0	1/1:0,14:14:39.09:398,39,0	0/0:20,0:20:57.17:0,57,702	1/1:0,2:2:6.01:61,6,0
chr10	79882902	.	T	TAC	429.12	PASS	AB=0.947;AC=17;AF=0.304;AN=56;BaseQRankSum=3.414;DP=494;FS=0.951;HRun=0;HaplotypeScore=84.9268;InbreedingCoeff=0.3580;MQ=67.51;MQ0=7;MQRankSum=-0.029;QD=2.19;ReadPosRankSum=-2.811;VQSLOD=0.7063;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:1.41:3,1,0	0/0:8,0:8:6.02:0,6,67	0/0:18,0:13:5.96:0,6,53	0/0:29,0:22:8.12:0,8,75	0/0:22,0:22:21.93:0,22,242	0/0:17,0:17:10.98:0,11,49	0/0:14,0:15:26.86:0,27,263	0/1:21,0:21:42.86:43,0,149	0/0:20,0:24:34.07:0,34,352	0/0:16,0:16:26.54:0,27,301	0/0:18,0:18:26.68:0,27,268	0/0:9,0:9:0.43:0,0,1	1/1:13,7:21:2.47:43,2,0	0/1:12,2:14:32.33:75,0,32	0/0:10,0:10:18.05:0,18,206	0/0:15,0:15:27.08:0,27,310	0/0:25,0:25:45.13:0,45,521	0/0:16,0:16:40.76:0,41,426	0/0:12,0:12:12.02:0,12,128	0/0:25,0:25:42.10:0,42,470	0/1:23,2:24:54.33:54,0,260	0/1:13,0:12:15.44:16,0,15	1/1:6,2:8:2.61:43,3,0	1/1:25,7:37:11.51:174,12,0	0/1:13,1:14:13.27:59,0,13	1/1:15,0:14:8.16:34,8,0	0/0:19,0:18:27.06:0,27,299	1/1:2,1:3:3.01:44,3,0
chr10	79882926	.	CACAT	C	983.01	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=1.338;DP=582;FS=2.080;HRun=0;HaplotypeScore=101.4684;InbreedingCoeff=-0.0781;MQ=52.83;MQ0=11;MQRankSum=1.505;QD=3.92;ReadPosRankSum=-5.868;VQSLOD=0.3343;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:0.10:226,0,0	0/0:7,0:7:17.86:0,18,207	0/0:16,0:4:11.88:0,12,83	0/1:31,0:9:13.41:13,0,41	0/1:23,0:23:46.46:46,0,581	1/1:0,20:20:12.04:226,12,0	0/0:18,0:18:32.86:0,33,460	0/0:31,0:31:45.69:0,46,614	0/0:31,0:31:60.31:0,60,1027	0/0:24,0:23:25.62:0,26,906	0/0:17,0:17:29.61:0,30,509	0/1:11,0:11:60.06:74,0,60	0/1:27,0:27:99:116,0,147	0/1:14,0:14:16.37:16,0,264	0/0:14,0:14:24.35:0,24,425	0/0:15,0:15:35.70:0,36,560	0/0:32,0:32:37.80:0,38,1050	0/0:20,0:20:13.34:0,13,838	0/0:16,0:15:28.79:0,29,374	0/0:33,0:33:80.64:0,81,1314	0/0:37,0:34:14.54:0,15,707	0/1:11,0:10:28.48:56,0,28	0/1:13,0:13:33.28:73,0,33	0/1:34,0:33:99:119,0,153	0/1:13,0:13:8.63:9,0,116	0/1:21,0:20:99:132,0,161	0/0:20,0:19:50.99:0,51,808	0/1:4,0:4:35.92:36,0,40
chr10	79882930	.	TAC	T	40.17	PASS	AB=0.940;AC=9;AF=0.161;AN=56;BaseQRankSum=2.661;DP=577;FS=3.147;HRun=0;HaplotypeScore=87.8043;InbreedingCoeff=0.0301;MQ=52.61;MQ0=11;MQRankSum=3.679;QD=0.24;ReadPosRankSum=0.399;VQSLOD=1.2843;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:2.37:0,2,23	0/1:6,1:7:17.48:17,0,175	0/0:17,0:4:6.02:0,6,90	0/0:30,0:7:11.86:0,12,108	0/1:19,4:23:0.03:0,0,432	1/1:20,0:20:10.71:45,11,0	0/1:16,1:17:73.24:73,0,300	0/1:34,0:34:2.12:2,0,798	0/0:30,0:30:53.85:0,54,768	0/0:25,0:24:53.95:0,54,738	0/1:15,1:16:8.45:8,0,334	0/0:12,0:12:2.48:0,2,39	0/0:26,0:26:12.29:0,12,134	0/0:14,0:14:23.99:0,24,283	0/1:15,0:15:8.20:8,0,337	0/0:14,0:14:24.08:0,24,361	0/1:31,1:32:9.42:9,0,742	0/0:20,0:20:36.12:0,36,546	0/0:16,0:15:29.93:0,30,373	0/0:31,3:34:69.09:0,69,999	0/0:33,0:31:41.71:0,42,558	0/0:11,0:10:2.76:0,3,55	0/0:12,0:12:7.37:0,7,56	0/0:31,0:30:22.04:0,22,177	0/0:13,0:13:12.79:0,13,123	0/0:20,0:19:17.52:0,18,185	0/0:18,1:18:45.15:0,45,670	0/0:6,0:6:5.99:0,6,50
chr10	79884095	.	T	TTAAA	16283.13	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-11.451;DP=593;FS=14.240;HRun=0;HaplotypeScore=91.1464;InbreedingCoeff=0.9934;MQ=78.11;MQ0=1;MQRankSum=-7.102;QD=64.87;ReadPosRankSum=2.140;VQSLOD=6.1736;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,29:35:81.28:2176,81,0	0/0:12,0:12:36.12:0,36,698	0/0:13,0:13:36.12:0,36,603	0/0:17,0:17:13.28:0,13,476	0/0:29,0:29:81.26:0,81,1518	1/1:2,19:23:57.12:1388,57,0	0/0:15,0:15:45.15:0,45,852	0/0:23,0:23:66.23:0,66,1273	0/0:32,0:32:96.30:0,96,1777	0/0:21,0:21:54.19:0,54,1032	0/0:25,0:25:75.26:0,75,1440	1/1:3,16:21:57.20:1495,57,0	1/1:8,19:27:72.20:1805,72,0	1/1:4,12:18:45.15:1170,45,0	0/0:20,0:20:60.19:0,60,1130	0/0:11,0:11:33.10:0,33,601	0/0:19,0:19:54.16:0,54,1012	0/0:15,0:15:42.14:0,42,814	0/0:13,0:13:36.11:0,36,666	0/0:30,0:30:90.31:0,90,1736	0/0:26,0:26:69.24:0,69,1329	1/1:5,19:27:66.18:1632,66,0	1/1:1,15:17:51.09:1264,51,0	1/1:3,19:22:54.19:1460,54,0	1/1:2,21:23:60.16:1567,60,0	1/1:8,18:27:14.05:1669,14,0	0/0:21,0:21:63.22:0,63,1211	1/1:0,9:10:24.08:657,24,0
chr10	79884899	.	A	AT	4620.86	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-3.403;DP=530;FS=9.504;HRun=6;HaplotypeScore=54.5368;InbreedingCoeff=0.9880;MQ=83.67;MQ0=0;MQRankSum=-0.922;QD=32.31;ReadPosRankSum=3.668;VQSLOD=4.8522;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.12:0,54,551	0/0:4,0:4:9.02:0,9,92	0/0:20,0:20:54.02:0,54,518	0/0:11,0:11:26.87:0,27,239	0/0:23,0:23:66.14:0,66,667	0/0:22,0:22:57.09:0,57,568	0/0:14,0:14:39.09:0,39,397	0/0:32,0:31:81.17:0,81,826	0/0:31,0:31:84.17:0,84,849	0/0:30,0:30:87.18:0,87,880	0/0:19,0:19:54.12:0,54,551	1/1:1,21:22:57.18:717,57,0	1/1:2,18:20:54.17:679,54,0	1/1:4,21:25:60.19:746,60,0	0/0:21,0:21:63.13:0,63,636	0/0:9,0:9:24.05:0,24,245	0/0:15,0:15:42.06:0,42,419	0/0:12,0:12:24.05:0,24,245	0/0:12,0:12:30.06:0,30,306	0/0:24,0:24:57.12:0,57,581	0/0:18,0:18:54.12:0,54,551	1/1:1,17:18:48.15:604,48,0	1/1:2,18:20:54.16:666,54,0	1/1:2,17:19:51.16:642,51,0	1/1:1,18:19:45.14:566,45,0	0/0:24,0:24:66.11:0,66,658	0/0:19,0:19:45.10:0,45,458	0/0:8,0:8:23.98:0,24,220
chr10	79885145	.	CT	C	2225.17	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=11.936;DP=364;FS=7.637;HRun=8;HaplotypeScore=51.1479;InbreedingCoeff=0.9752;MQ=73.06;MQ0=0;MQRankSum=-0.633;QD=17.12;ReadPosRankSum=3.488;VQSLOD=3.1427;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:36.05:348,36,0	0/0:6,0:6:12.04:0,12,145	0/0:19,0:19:32.08:0,32,352	0/0:10,0:7:13.45:0,13,105	0/0:8,0:8:24.06:0,24,278	1/1:2,12:14:36.06:347,36,0	0/0:11,0:11:27.05:0,27,300	0/0:25,0:25:54.14:0,54,630	0/0:11,0:11:30.08:0,30,350	0/0:13,1:14:10.13:0,10,398	0/0:17,0:17:48.15:0,48,579	1/1:2,8:10:24.04:232,24,0	1/1:2,12:14:27.04:261,27,0	1/1:0,11:11:30.05:290,30,0	0/0:11,0:11:33.10:0,33,398	0/0:7,0:7:21.05:0,21,241	0/0:22,0:22:63.15:0,63,734	0/0:14,0:14:33.06:0,33,373	0/0:23,0:23:42.10:0,42,478	0/0:10,0:10:30.08:0,30,351	0/0:6,0:6:18.04:0,18,206	1/1:0,7:7:18.03:174,18,0	1/1:2,3:5:12.01:112,12,0	1/1:0,7:7:18.03:174,18,0	1/1:2,10:12:33.04:315,33,0	1/1:4,0:25:42.77:126,43,0	0/0:20,0:20:60.17:0,60,713	1/1:0,0:9:20.01:72,20,0
chr10	79885182	.	C	CT	482.38	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.372;DP=328;FS=1.100;HRun=5;HaplotypeScore=45.1749;InbreedingCoeff=0.8003;MQ=72.13;MQ0=0;MQRankSum=-2.692;QD=32.16;ReadPosRankSum=0.242;VQSLOD=3.8651;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:42.04:0,42,437	0/0:2,0:2:6.02:0,6,64	0/0:9,0:9:21.05:0,21,225	0/0:6,0:5:12.03:0,12,128	0/0:11,0:11:33.08:0,33,354	1/1:1,14:15:45.13:577,45,0	0/0:11,0:11:27:0,27,268	0/0:25,0:25:57.14:0,57,613	0/0:13,0:13:33.08:0,33,355	0/0:8,0:8:18.04:0,18,194	0/0:21,0:21:57.13:0,57,605	0/0:6,0:6:15.04:0,15,161	0/0:13,0:13:33.07:0,33,347	0/0:9,0:9:27.07:0,27,290	0/0:8,0:8:24.05:0,24,250	0/0:9,0:9:24.06:0,24,258	0/0:27,0:27:75.14:0,75,787	0/0:16,0:16:45.11:0,45,482	0/0:14,0:14:36.09:0,36,387	0/0:12,0:12:36.09:0,36,386	0/0:5,0:5:15.04:0,15,161	0/0:4,0:4:12.03:0,12,129	0/0:7,0:7:21.05:0,21,226	0/0:6,0:6:15.04:0,15,161	0/0:9,0:9:27.07:0,27,290	0/0:18,0:18:51.13:0,51,548	0/0:24,0:24:66.15:0,66,701	0/0:6,0:6:18.02:0,18,183
chr10	79885292	.	TTATA	T	1072.92	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=5.251;DP=227;FS=2.909;HRun=0;HaplotypeScore=48.7068;InbreedingCoeff=0.6176;MQ=69.80;MQ0=1;MQRankSum=-5.608;QD=37.00;ReadPosRankSum=0.740;VQSLOD=3.2846;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:0,0:13:30.88:0,31,142	0/0:3,0:3:9.03:0,9,199	./.	0/0:13,0:8:2.25:0,2,129	0/0:8,0:8:18.06:0,18,429	0/0:2,0:7:13.99:0,14,63	0/0:3,0:3:6.02:0,6,147	0/0:29,0:29:63:0,63,1443	0/0:5,0:5:9.03:0,9,229	0/0:6,0:6:18.06:0,18,457	0/0:6,0:6:15.05:0,15,381	0/0:1,0:7:15.03:0,15,237	0/0:1,0:7:15.05:0,15,266	0/0:1,0:3:3.01:0,3,53	0/0:7,0:7:15.05:0,15,376	0/0:2,0:2:6.02:0,6,152	0/0:30,0:30:72.20:0,72,1697	0/0:6,0:6:12.04:0,12,304	0/0:12,0:12:24.08:0,24,595	0/0:7,0:7:18.06:0,18,429	0/0:7,0:7:21.07:0,21,480	./.	0/0:0,0:2:5.51:0,6,61	1/1:2,0:4:1.82:5,2,0	0/0:3,0:4:6.02:0,6,91	1/1:1,18:19:54.18:926,54,0	0/0:9,0:9:15.05:0,15,375	1/1:0,6:6:15.05:261,15,0
chr10	79887233	.	ACCATAGAACTACT	A	1550.87	PASS	AB=0.519;AC=3;AF=0.054;AN=56;BaseQRankSum=6.511;DP=491;FS=30.779;HRun=0;HaplotypeScore=171.5972;InbreedingCoeff=0.5897;MQ=56.74;MQ0=1;MQRankSum=-4.122;QD=70.49;ReadPosRankSum=1.217;VQSLOD=1.8457;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.23:0,66,4137	0/0:8,0:8:21.07:0,21,1306	0/0:13,0:7:21.07:0,21,1174	0/0:16,0:10:30.10:0,30,1717	0/0:22,0:22:57.18:0,57,3409	0/0:23,0:23:69.24:0,69,4102	0/0:12,0:12:33.07:0,33,1708	0/0:35,0:34:99:0,99,6144	0/0:17,0:17:51.18:0,51,3362	0/0:24,0:24:69.24:0,69,4310	0/0:21,0:21:54.19:0,54,3274	0/0:14,0:14:42.14:0,42,2700	0/0:18,0:18:51.16:0,51,3091	0/0:15,0:15:45.15:0,45,2970	0/0:11,0:11:30.09:0,30,1731	0/0:12,0:12:33.10:0,33,1716	0/0:30,0:29:90.24:0,90,5227	0/0:13,0:13:39.13:0,39,2566	0/0:26,0:26:75.25:0,75,4453	0/0:27,0:27:75.26:0,75,4514	0/0:14,0:14:39.13:0,39,2566	0/0:11,0:11:30.10:0,30,1743	0/0:16,0:16:33.58:0,34,2132	0/0:16,0:16:48.16:0,48,3020	0/0:14,0:14:36.06:0,36,2238	0/1:1,13:14:99:1292,0,157	0/0:18,0:17:54.17:0,54,3175	1/1:1,7:8:9.03:356,9,0
chr10	79888436	.	ATT	A	3605.32	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=8.483;DP=550;FS=4.715;HRun=13;HaplotypeScore=82.6772;InbreedingCoeff=0.9445;MQ=65.14;MQ0=3;MQRankSum=-0.552;QD=19.49;ReadPosRankSum=5.865;VQSLOD=3.1770;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:26:46.89:592,47,0	0/0:3,0:17:42.04:0,42,392	0/0:19,0:13:10.04:0,10,209	0/0:19,0:15:3.25:0,3,80	0/0:33,1:36:63.63:0,64,1122	0/0:5,0:28:56.29:0,56,256	0/0:18,0:20:53.11:0,53,656	0/0:18,0:19:47.51:0,48,511	0/0:13,0:14:39.10:0,39,514	0/0:21,0:24:62.63:0,63,786	0/0:23,0:24:53.60:0,54,673	1/1:4,12:16:4.57:236,5,0	1/1:1,16:17:45.07:436,45,0	1/1:0,19:19:54.09:524,54,0	0/0:15,0:15:29.80:0,30,352	0/0:11,0:13:36.10:0,36,473	0/0:16,0:17:34.85:0,35,601	0/0:17,1:19:15.52:0,16,524	0/0:21,1:23:50.64:0,51,656	0/0:13,0:14:41.54:0,42,492	0/0:20,0:21:47.60:0,48,605	1/1:1,15:16:35.96:349,36,0	1/1:5,15:20:38.72:377,39,0	1/1:2,17:22:23.51:364,24,0	1/1:0,16:16:45.07:436,45,0	1/1:5,1:21:44.13:207,44,0	0/0:20,0:22:47.50:0,48,626	1/1:1,0:11:19.21:83,19,0
chr10	79888660	.	A	AC	5670.36	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=8.631;DP=437;FS=0.000;HRun=5;HaplotypeScore=47.7438;InbreedingCoeff=0.9675;MQ=63.08;MQ0=0;MQRankSum=2.341;QD=32.97;ReadPosRankSum=2.264;VQSLOD=5.1457;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:54.18:710,54,0	0/0:4,0:4:9.02:0,9,97	0/0:11,0:8:21.05:0,21,223	0/0:10,0:8:12.49:0,12,120	0/0:21,0:21:54.13:0,54,580	1/1:0,16:16:36.12:474,36,0	0/0:12,0:12:33.07:0,33,347	0/0:15,0:15:13.27:0,13,361	0/0:9,0:9:21.03:0,21,216	0/0:24,0:24:63.16:0,63,677	0/0:22,0:22:66.16:0,66,707	1/1:2,18:20:42.14:553,42,0	1/1:0,13:13:36.12:474,36,0	1/1:1,23:24:57.19:750,57,0	0/0:18,0:18:54.14:0,54,580	0/0:12,0:12:30.06:0,30,314	0/0:30,0:30:75.16:0,75,794	0/0:18,0:18:42.60:0,43,508	0/0:11,0:11:33.08:0,33,354	0/0:22,0:22:63.16:0,63,677	0/0:12,0:12:36.09:0,36,387	1/1:0,15:15:39.13:513,39,0	1/1:0,16:16:48.16:630,48,0	1/1:0,14:14:42.14:553,42,0	1/1:0,14:14:33.11:434,33,0	1/1:2,13:15:9.85:463,10,0	0/0:13,0:13:36.09:0,36,386	1/1:0,3:3:9.03:118,9,0
chr10	79889656	.	G	GTGTT	14956.08	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-6.188;DP=694;FS=1.375;HRun=0;HaplotypeScore=102.5797;InbreedingCoeff=0.9993;MQ=60.50;MQ0=1;MQRankSum=-2.785;QD=63.11;ReadPosRankSum=1.348;VQSLOD=6.4696;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:23:60.16:1461,60,0	0/0:7,0:7:21.07:0,21,392	0/0:17,0:16:42.14:0,42,773	0/0:21,0:18:54.12:0,54,959	0/0:23,0:23:63.22:0,63,1161	1/1:4,33:37:96.33:2509,96,0	0/0:20,0:19:57.18:0,57,1033	0/0:32,0:32:81.28:0,81,1473	0/0:32,0:32:87.27:0,87,1542	0/0:34,0:34:90.31:0,90,1663	0/0:32,0:32:87.28:0,87,1582	1/1:3,21:24:54.19:1411,54,0	1/1:6,21:29:78.23:1867,78,0	1/1:2,22:25:54.15:1381,54,0	0/0:18,0:18:54.16:0,54,975	0/0:17,0:17:45.15:0,45,829	0/0:31,0:31:81.28:0,81,1499	0/0:24,0:24:66.23:0,66,1221	0/0:20,0:19:54.17:0,54,966	0/0:22,0:22:63.22:0,63,1175	0/0:32,0:32:90.31:0,90,1680	1/1:3,21:21:60.16:1396,60,0	1/1:3,24:30:73.49:1894,73,0	1/1:0,23:23:63.22:1651,63,0	1/1:6,16:21:54.19:1385,54,0	0/0:28,0:28:78.23:0,78,1393	0/0:33,0:33:96.33:0,96,1784	0/0:14,0:14:36.12:0,36,672
chr10	79890882	.	GA	G	6524.77	PASS	AB=0.524;AC=21;AF=0.375;AN=56;BaseQRankSum=19.059;DP=623;FS=14.355;HRun=7;HaplotypeScore=95.9138;InbreedingCoeff=0.9289;MQ=80.58;MQ0=0;MQRankSum=-3.493;QD=26.00;ReadPosRankSum=4.507;VQSLOD=3.8742;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,37:40:99:1060,105,0	0/0:7,0:7:21.07:0,21,264	0/0:18,0:18:39.10:0,39,472	0/0:17,0:17:36.11:0,36,439	0/0:33,0:33:81.26:0,81,1019	1/1:3,30:33:87.17:878,87,0	0/0:11,0:11:30.08:0,30,362	0/0:25,0:25:69.18:0,69,831	0/0:21,0:21:60.19:0,60,752	0/0:33,0:33:93.29:0,93,1156	0/0:29,0:29:81.25:0,81,1006	1/1:3,16:19:54.08:533,54,0	1/1:5,17:22:45.08:454,45,0	1/1:1,17:18:39.08:394,39,0	0/0:25,0:24:60.19:0,60,754	0/0:21,0:21:57.18:0,57,714	0/0:26,0:26:72.22:0,72,892	0/0:6,0:5:15.05:0,15,186	0/0:22,0:22:57.18:0,57,717	0/0:30,0:30:84.26:0,84,1046	0/0:15,0:15:42.13:0,42,528	1/1:0,23:23:66.13:666,66,0	1/1:1,20:21:57.05:575,57,0	1/1:1,15:16:42.08:424,42,0	1/1:0,21:21:54.11:545,54,0	0/1:2,20:22:9.36:538,0,9	0/0:33,0:33:96.31:0,96,1205	1/1:1,15:16:45.10:459,45,0
chr10	79891317	.	T	TA	5150.59	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-10.005;DP=506;FS=5.321;HRun=5;HaplotypeScore=44.9155;InbreedingCoeff=0.9982;MQ=74.48;MQ0=0;MQRankSum=-0.230;QD=34.34;ReadPosRankSum=2.953;VQSLOD=4.9988;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:11:27.09:355,27,0	0/0:9,0:9:24.06:0,24,257	0/0:12,0:12:27.05:0,27,280	0/0:7,0:7:20.84:0,21,207	0/0:20,0:20:48.12:0,48,516	1/1:1,23:24:63.20:829,63,0	0/0:14,0:14:42.11:0,42,451	0/0:35,0:35:84.20:0,84,895	0/0:22,0:22:45.46:0,45,597	0/0:16,0:16:42.10:0,42,450	0/0:17,0:17:48.10:0,48,507	1/1:2,19:21:54.14:692,54,0	1/1:1,17:18:45.15:590,45,0	1/1:1,16:17:42.14:553,42,0	0/0:23,0:23:60.13:0,60,635	0/0:17,0:17:45.09:0,45,474	0/0:23,0:23:60.15:0,60,645	0/0:10,0:10:30.08:0,30,322	0/0:18,0:18:42.09:0,42,436	0/0:25,0:25:60.13:0,60,636	0/0:27,0:27:75.14:0,75,787	1/1:1,11:12:30.10:395,30,0	1/1:2,21:23:63.20:829,63,0	1/1:1,13:14:39.13:513,39,0	1/1:2,8:10:30.10:395,30,0	0/0:19,0:19:54.13:0,54,572	0/0:33,0:33:93.23:0,93,1000	0/0:9,0:9:27.07:0,27,290
chr10	79891994	.	T	TA	848.46	PASS	AB=0.792;AC=17;AF=0.304;AN=56;BaseQRankSum=3.954;DP=299;FS=8.541;HRun=10;HaplotypeScore=36.9029;InbreedingCoeff=0.6426;MQ=53.32;MQ0=20;MQRankSum=-3.599;QD=8.48;ReadPosRankSum=2.479;VQSLOD=0.6825;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:5:5.68:28,6,0	0/0:7,0:7:17.94:0,18,142	0/1:4,1:4:20.77:21,0,40	0/0:7,0:6:14.71:0,15,103	0/0:19,0:19:41.94:0,42,344	1/1:7,0:7:14.20:70,14,0	0/0:10,0:9:20.94:0,21,172	0/0:24,0:23:44.89:0,45,369	0/0:12,0:12:23.94:0,24,197	0/0:11,0:10:26.96:0,27,221	0/0:7,0:7:14.97:0,15,123	1/1:8,0:8:11.36:56,11,0	1/1:9,0:9:5.08:80,5,0	1/1:11,0:10:11.20:53,11,0	0/0:7,0:6:14.98:0,15,123	0/0:7,0:7:14.96:0,15,123	0/0:16,0:11:26.94:0,27,222	0/0:12,0:10:29.95:0,30,243	0/0:12,0:11:26.95:0,27,221	0/0:4,0:4:11.99:0,12,99	0/0:15,0:13:31.48:0,31,246	0/0:3,0:3:2.88:0,3,18	0/1:6,0:7:13.39:19,0,13	0/0:5,0:3:2.94:0,3,18	1/1:10,0:10:17.04:84,17,0	0/1:9,9:18:6.72:337,0,7	0/0:21,0:21:47.92:0,48,394	1/1:3,9:10:27.07:288,27,0
chr10	79892002	.	A	AAAAAAG	2706.12	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-1.751;DP=309;FS=24.626;HRun=0;HaplotypeScore=56.2069;InbreedingCoeff=0.9261;MQ=57.19;MQ0=12;MQRankSum=-8.997;QD=31.84;ReadPosRankSum=0.694;VQSLOD=1.3946;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:8:6.02:133,6,0	0/0:7,0:7:21.02:0,21,360	0/0:6,0:5:14.53:0,15,193	0/0:7,0:6:14.79:0,15,240	0/0:18,0:18:44.97:0,45,795	1/1:1,0:7:18.02:354,18,0	0/0:12,0:11:29.97:0,30,444	0/0:23,0:22:59.93:0,60,881	0/0:10,0:10:26.09:0,26,505	0/0:10,0:10:27.07:0,27,550	0/0:8,0:8:18.02:0,18,313	1/1:3,5:8:12.04:402,12,0	1/1:1,12:18:24.05:728,24,0	1/1:1,4:12:12.04:395,12,0	0/0:8,0:7:18.05:0,18,340	0/0:6,0:6:18:0,18,283	0/0:15,0:12:33.06:0,33,615	0/0:12,0:12:33.07:0,33,578	0/0:14,0:13:32.98:0,33,526	0/0:4,0:4:12.04:0,12,251	0/0:15,0:15:38.08:0,38,582	1/1:2,0:2:5.93:40,6,0	1/1:5,0:5:14.85:117,15,0	1/1:5,0:3:8.97:146,9,0	1/1:2,8:14:18.06:594,18,0	0/0:16,0:16:33.49:0,33,359	0/0:23,0:23:62.68:0,63,1026	0/0:10,0:9:26.94:0,27,214
chr10	79893038	.	T	TACAG	11423	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-13.397;DP=521;FS=3.166;HRun=0;HaplotypeScore=77.7495;InbreedingCoeff=0.9934;MQ=75.27;MQ0=0;MQRankSum=-1.230;QD=66.41;ReadPosRankSum=1.429;VQSLOD=6.9561;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:33.11:879,33,0	0/0:9,0:9:24.07:0,24,420	0/0:14,0:14:36.09:0,36,588	0/0:7,0:7:21.01:0,21,283	0/0:41,0:41:99:0,117,2189	1/1:4,19:24:60.20:1616,60,0	0/0:11,0:11:33.11:0,33,627	0/0:27,0:27:75.24:0,75,1366	0/0:11,0:11:33.11:0,33,626	0/0:16,0:16:42.14:0,42,798	0/0:25,0:25:69.24:0,69,1308	1/1:0,18:19:54.19:1450,54,0	1/1:2,20:22:51.17:1366,51,0	1/1:0,17:17:39.13:1049,39,0	0/0:17,0:17:45.15:0,45,854	0/0:13,0:13:36.12:0,36,684	0/0:27,0:27:75.26:0,75,1408	0/0:17,0:17:51.14:0,51,931	0/0:18,0:18:54.17:0,54,994	0/0:20,0:20:60.19:0,60,1108	0/0:4,0:4:12.02:0,12,194	1/1:1,16:18:42.14:1130,42,0	1/1:5,25:30:78.27:2091,78,0	1/1:1,10:11:21.07:565,21,0	1/1:2,15:17:48.16:1277,48,0	0/0:29,0:29:84.29:0,84,1595	0/0:29,0:29:87.28:0,87,1599	0/0:14,0:14:39.13:0,39,715
chr10	79893224	.	A	AT	3093.78	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-10.329;DP=436;FS=0.908;HRun=8;HaplotypeScore=39.5325;InbreedingCoeff=0.9793;MQ=70.57;MQ0=0;MQRankSum=-0.311;QD=25.36;ReadPosRankSum=0.185;VQSLOD=3.8984;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,11:15:33.06:366,33,0	0/0:5,0:5:15:0,15,133	0/0:6,0:6:16.25:0,16,140	0/0:7,0:7:6.78:0,7,126	0/0:19,0:19:57.03:0,57,522	1/1:2,19:21:48.14:554,48,0	0/0:10,0:10:30.02:0,30,274	0/0:29,0:29:63.03:0,63,576	0/0:15,0:15:42:0,42,379	0/0:14,0:14:42.02:0,42,384	0/0:20,0:20:60.03:0,60,549	1/1:1,12:13:24.07:277,24,0	1/1:0,13:13:33.10:381,33,0	1/1:1,9:10:27.08:312,27,0	0/0:21,0:21:54.03:0,54,494	0/0:11,0:11:33.02:0,33,302	0/0:13,0:13:33.02:0,33,302	0/0:20,0:20:41.96:0,42,374	0/0:23,0:23:58.84:0,59,527	0/0:13,0:13:36.02:0,36,330	0/0:22,0:22:60.03:0,60,549	1/1:1,11:12:30.09:346,30,0	1/1:3,15:18:45.13:519,45,0	1/1:1,11:12:30.09:346,30,0	1/1:1,7:8:18.05:208,18,0	0/0:26,0:26:51.26:0,51,611	0/0:24,0:24:63.03:0,63,576	0/0:16,0:16:39.01:0,39,357
chr10	79893461	.	T	TAGATTGC	28211.86	PASS	AB=0.734;AC=30;AF=0.536;AN=56;BaseQRankSum=-1.763;DP=503;FS=107.071;HRun=0;HaplotypeScore=113.7761;InbreedingCoeff=0.1086;MQ=66.62;MQ0=0;MQRankSum=-16.269;QD=67.01;ReadPosRankSum=-0.365;VQSLOD=1.6222;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,43:58:99:5127,141,0	0/1:2,1:3:99:112,0,149	0/0:22,0:21:34.32:0,34,821	0/0:15,0:9:11.70:0,12,252	0/0:12,0:12:36.10:0,36,838	1/1:1,10:13:33.11:1290,33,0	0/1:12,5:18:99:835,0,632	0/1:21,3:24:99:488,0,1265	0/1:13,12:25:99:1802,0,507	0/0:8,0:8:21.07:0,21,554	0/0:8,0:8:21.07:0,21,547	1/1:4,10:14:39.13:1376,39,0	1/1:3,7:14:30.10:1115,30,0	1/1:2,7:11:27.09:1059,27,0	0/0:9,0:9:24.07:0,24,579	0/0:7,0:7:21.07:0,21,519	0/1:18,9:28:99:737,0,1121	0/1:7,1:10:96.68:97,0,490	0/1:11,3:20:99:1194,0,418	0/1:11,19:31:99:2409,0,274	0/1:6,6:13:99:681,0,210	1/1:2,13:18:39.13:1479,39,0	1/1:1,8:11:27.01:1066,27,0	1/1:0,1:1:3.01:121,3,0	1/1:4,22:30:75.25:2821,75,0	0/1:19,14:33:99:2022,0,980	0/1:15,20:38:99:2252,0,719	0/1:6,0:6:99:129,0,219
chr10	79895360	.	AGTTT	A	1088.34	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.979;DP=488;FS=1.646;HRun=0;HaplotypeScore=97.8982;InbreedingCoeff=0.8923;MQ=72.89;MQ0=1;MQRankSum=1.201;QD=37.53;ReadPosRankSum=1.285;VQSLOD=3.6274;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.10:0,66,1314	0/0:5,0:5:15.04:0,15,371	0/0:11,0:11:24.41:0,24,508	0/0:14,0:14:34.74:0,35,575	0/0:19,0:19:55.05:0,55,1265	0/0:20,0:20:57.14:0,57,852	0/0:11,0:11:33.06:0,33,742	0/0:28,0:28:76.05:0,76,1527	0/0:24,0:24:72.21:0,72,1824	0/0:22,0:22:64.61:0,65,1413	0/0:18,0:18:54.17:0,54,1336	0/0:22,0:22:54.08:0,54,539	0/0:25,0:25:69.08:0,69,668	0/0:12,0:12:36.08:0,36,372	0/0:18,0:18:54.14:0,54,1252	0/0:16,0:16:48.13:0,48,1184	0/0:18,0:18:54.16:0,54,1427	0/0:18,0:18:54.02:0,54,1164	0/0:19,0:19:51.17:0,51,1202	0/0:23,0:23:69.16:0,69,1405	0/0:13,0:13:39.09:0,39,901	0/0:12,0:12:35.95:0,36,341	0/0:8,0:8:23.96:0,24,222	0/0:19,0:19:48.06:0,48,466	0/0:16,0:17:50.84:0,51,469	1/1:0,23:23:69.11:1137,69,0	0/0:24,0:24:72.19:0,72,1846	1/1:1,5:5:3.01:60,3,0
chr10	79895361	.	GTT	G	2680.95	PASS	AB=0.867;AC=19;AF=0.339;AN=56;BaseQRankSum=9.163;DP=485;FS=2.468;HRun=12;HaplotypeScore=71.9469;InbreedingCoeff=0.9217;MQ=72.05;MQ0=1;MQRankSum=0.285;QD=17.30;ReadPosRankSum=4.545;VQSLOD=2.8801;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:51.12:0,51,699	0/0:5,0:5:12.04:0,12,179	0/0:11,0:11:17.26:0,17,227	0/1:11,1:13:0.39:0,0,246	0/0:18,0:19:50.62:0,51,672	0/0:4,0:20:37.43:0,37,132	0/0:11,0:11:24.06:0,24,318	0/0:26,0:26:45.61:0,46,637	0/0:24,0:24:65.87:0,66,904	0/0:22,0:22:52.81:0,53,715	0/0:19,0:19:45.06:0,45,602	1/1:4,18:22:41.94:427,42,0	1/1:4,21:25:57.11:580,57,0	1/1:3,9:12:36.05:352,36,0	0/0:16,0:18:44.62:0,45,602	0/0:14,0:14:42.13:0,42,603	0/0:18,0:18:51.16:0,51,738	0/0:18,0:19:45.14:0,45,630	0/0:17,0:19:42.12:0,42,574	0/0:22,0:24:53.64:0,54,709	0/0:13,0:13:36.10:0,36,499	1/1:3,9:12:21:214,21,0	1/1:0,7:7:18.04:183,18,0	1/1:2,16:18:42.09:427,42,0	1/1:2,15:17:48.10:488,48,0	1/1:23,0:22:42.88:204,43,0	0/0:25,0:25:66.19:0,66,937	1/1:6,0:5:2.80:13,3,0
chr10	79895455	.	AAT	A	9960.24	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=18.664;DP=624;FS=1.011;HRun=0;HaplotypeScore=91.9343;InbreedingCoeff=0.9984;MQ=78.82;MQ0=1;MQRankSum=-4.663;QD=46.11;ReadPosRankSum=5.120;VQSLOD=6.2769;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:81.28:1315,81,0	0/0:8,0:8:24.08:0,24,488	0/0:21,0:21:63.21:0,63,1229	0/0:17,0:17:48.16:0,48,936	0/0:26,0:26:75.25:0,75,1484	1/1:0,25:25:72.25:1174,72,0	0/0:11,0:11:33.10:0,33,636	0/0:29,0:29:81.25:0,81,1526	0/0:22,0:22:63.21:0,63,1245	0/0:26,0:26:78.26:0,78,1553	0/0:35,0:35:99:0,105,2117	1/1:0,17:17:48.16:783,48,0	1/1:0,20:20:57.19:927,57,0	1/1:0,22:22:60.20:976,60,0	0/0:26,0:26:78.27:0,78,1574	0/0:17,0:17:51.18:0,51,1036	0/0:16,0:16:48.16:0,48,975	0/0:13,0:13:39.13:0,39,779	0/0:22,0:22:66.23:0,66,1300	0/0:32,0:32:96.33:0,96,1943	0/0:21,0:21:63.22:0,63,1269	1/1:0,32:32:96.33:1562,96,0	1/1:0,27:27:81.28:1318,81,0	1/1:0,20:20:51.17:831,51,0	1/1:2,23:25:69.20:1073,69,0	0/0:29,0:29:87.30:0,87,1767	0/0:25,0:23:75.26:0,75,1498	0/0:12,0:11:18.06:0,18,360
chr10	79895537	.	AAAG	A	938.26	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.456;DP=700;FS=0.780;HRun=0;HaplotypeScore=103.9686;InbreedingCoeff=0.9991;MQ=84.81;MQ0=0;MQRankSum=-2.177;QD=36.09;ReadPosRankSum=0.617;VQSLOD=4.1501;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,2210	0/0:16,0:16:42.14:0,42,918	0/0:33,0:33:43.68:0,44,1673	0/0:18,0:17:41.69:0,42,761	0/0:33,0:33:93.32:0,93,1984	0/0:18,0:18:54.19:0,54,1189	0/0:18,0:18:48.15:0,48,1013	0/0:31,0:31:90.31:0,90,1955	0/0:29,0:29:84.26:0,84,1801	0/0:30,0:30:87.30:0,87,1918	0/0:25,0:25:66.23:0,66,1425	0/0:26,0:26:75.26:0,75,1656	0/0:22,0:22:63.22:0,63,1380	0/0:23,0:23:63.22:0,63,1336	0/0:31,0:31:90.27:0,90,1858	0/0:18,0:18:54.19:0,54,1184	0/0:37,0:37:99:0,102,2178	0/0:10,0:10:30.10:0,30,640	0/0:27,0:27:75.25:0,75,1595	0/0:27,0:27:78.27:0,78,1720	0/0:17,0:17:51.17:0,51,1090	0/0:28,0:28:78.27:0,78,1720	0/0:28,0:28:69.24:0,69,1523	0/0:31,0:31:81.28:0,81,1783	0/0:27,0:27:72.25:0,72,1490	1/1:3,13:16:39.13:626,39,0	0/0:34,0:33:99:0,99,2178	1/1:0,10:10:27.09:434,27,0
chr10	79896383	.	G	GA	3206.58	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-6.154;DP=329;FS=1.101;HRun=6;HaplotypeScore=29.9390;InbreedingCoeff=0.8995;MQ=62.62;MQ0=7;MQRankSum=-0.315;QD=28.13;ReadPosRankSum=3.501;VQSLOD=3.2398;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:45.14:566,45,0	0/0:1,0:1:3.01:0,3,31	0/0:16,0:9:27.02:0,27,265	0/1:10,0:6:2.66:3,0,80	0/0:16,0:16:48.09:0,48,483	1/1:0,12:12:33.11:415,33,0	0/0:6,0:6:15.01:0,15,145	0/0:30,0:27:72.15:0,72,729	0/0:12,0:12:30.07:0,30,306	0/0:12,0:12:33.06:0,33,331	0/0:17,0:17:39.08:0,39,398	1/1:0,9:9:21.07:264,21,0	1/1:0,3:3:9.03:113,9,0	1/1:1,10:11:30.10:377,30,0	0/0:6,0:6:15.03:0,15,153	0/0:8,0:8:21.05:0,21,214	0/0:18,0:17:48.11:0,48,489	0/0:12,0:11:33.04:0,33,327	0/0:15,0:11:30.06:0,30,301	0/0:21,0:21:63.14:0,63,642	0/0:10,0:10:27.06:0,27,275	1/1:1,4:5:9.03:113,9,0	1/1:1,7:8:21.07:264,21,0	1/1:1,5:6:15.04:176,15,0	1/1:1,5:6:15.05:189,15,0	1/1:1,13:14:39.12:491,39,0	0/0:15,0:15:42.08:0,42,422	1/1:0,12:12:36.12:453,36,0
chr10	79896774	.	TG	T	887.25	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.791;DP=602;FS=10.204;HRun=1;HaplotypeScore=64.0262;InbreedingCoeff=0.9935;MQ=88.33;MQ0=0;MQRankSum=-2.513;QD=35.49;ReadPosRankSum=0.768;VQSLOD=3.0071;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.23:0,66,1053	0/0:7,0:7:21.07:0,21,335	0/0:25,0:25:73.10:0,73,1110	0/0:20,0:20:56.68:0,57,871	0/0:28,0:28:81.26:0,81,1268	0/0:21,0:21:57.19:0,57,910	0/0:18,0:18:54.18:0,54,863	0/0:35,0:35:99:0,105,1655	0/0:30,0:30:90.28:0,90,1412	0/0:30,0:29:87.30:0,87,1384	0/0:16,0:16:48.15:0,48,742	0/0:23,0:23:63.21:0,63,1004	0/0:19,0:19:57.19:0,57,910	0/0:16,0:16:48.16:0,48,764	0/0:23,0:23:66.23:0,66,1055	0/0:22,0:22:66.23:0,66,1055	0/0:18,0:18:54.17:0,54,840	0/0:10,0:10:30.10:0,30,479	0/0:28,0:28:84.22:0,84,1272	0/0:28,0:28:84.27:0,84,1312	0/0:26,0:26:75.26:0,75,1199	0/0:19,0:19:57.19:0,57,911	0/0:25,0:25:66.23:0,66,1055	0/0:21,0:21:60.20:0,60,959	0/0:18,0:18:54.18:0,54,863	1/1:0,18:18:54.18:755,54,0	0/0:27,0:27:78.22:0,78,1219	1/1:0,7:7:18.06:252,18,0
chr10	79896974	.	TGTTG	T	8363.10	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.522;DP=493;FS=0.369;HRun=0;HaplotypeScore=95.3148;InbreedingCoeff=0.9976;MQ=80.14;MQ0=1;MQRankSum=-11.570;QD=51.94;ReadPosRankSum=1.620;VQSLOD=5.8994;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:36.12:711,36,0	0/0:6,0:6:18.06:0,18,465	0/0:19,0:19:57.20:0,57,1416	0/0:11,0:11:33.09:0,33,812	0/0:25,0:25:72.25:0,72,1949	1/1:2,22:24:63.22:1256,63,0	0/0:24,0:24:66.23:0,66,1800	0/0:29,0:29:72.23:0,72,1839	0/0:15,0:15:45.15:0,45,1194	0/0:16,0:16:48.16:0,48,1311	0/0:16,0:16:48.13:0,48,1159	1/1:0,14:14:39.13:778,39,0	1/1:1,27:28:81.28:1614,81,0	1/1:0,18:18:48.16:958,48,0	0/0:13,0:13:36.12:0,36,1007	0/0:16,0:16:42.14:0,42,1175	0/0:25,0:25:75.24:0,75,2036	0/0:11,0:11:33.11:0,33,879	0/0:23,0:23:66.23:0,66,1842	0/0:17,0:17:51.17:0,51,1370	0/0:14,0:14:39.13:0,39,1055	1/1:0,13:13:39.05:695,39,0	1/1:1,21:21:54.18:1035,54,0	1/1:0,10:10:21.07:419,21,0	1/1:0,18:17:45.15:898,45,0	0/0:24,0:24:69.24:0,69,1919	0/0:20,0:19:57.20:0,57,1581	0/0:8,0:8:24.08:0,24,672
chr10	79897635	.	CGTT	C	7633.98	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.872;DP=670;FS=10.541;HRun=0;HaplotypeScore=120.4434;InbreedingCoeff=0.9719;MQ=76.08;MQ0=0;MQRankSum=-1.840;QD=30.78;ReadPosRankSum=2.684;VQSLOD=5.1186;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:27:42.14:614,42,0	0/0:5,0:5:15.05:0,15,309	0/0:32,0:29:53.51:0,54,878	0/0:31,0:30:42.50:0,43,1085	0/0:23,0:23:54.19:0,54,1095	1/1:7,22:29:48.16:702,48,0	0/0:30,0:30:69.22:0,69,1341	0/0:25,0:25:48.16:0,48,962	0/0:26,0:26:70.48:0,70,1414	0/0:29,0:29:81.28:0,81,1588	0/0:21,0:21:54.17:0,54,1033	1/1:24,0:24:54.17:769,54,0	1/1:36,0:36:84.26:1223,84,0	1/1:27,0:27:69.23:1007,69,0	0/0:26,0:26:60.21:0,60,1217	0/0:26,0:26:60.21:0,60,1213	0/0:23,0:23:54.19:0,54,1114	0/0:8,0:8:21.07:0,21,431	0/0:22,0:22:39.12:0,39,768	0/0:24,0:24:57.20:0,57,1162	0/0:40,0:40:93.32:0,93,1858	1/1:18,0:18:36.12:517,36,0	1/1:13,0:13:27.06:394,27,0	1/1:22,0:22:51.17:745,51,0	1/1:22,0:22:39.12:569,39,0	1/1:4,24:28:72.24:1050,72,0	0/0:31,0:31:87.30:0,87,1772	1/1:1,1:2:3.01:44,3,0
chr10	79897648	.	GTT	G	3443.69	PASS	AB=0.876;AC=16;AF=0.286;AN=56;BaseQRankSum=18.882;DP=660;FS=8.800;HRun=2;HaplotypeScore=120.7475;InbreedingCoeff=0.5092;MQ=66.09;MQ0=0;MQRankSum=-1.101;QD=14.53;ReadPosRankSum=6.762;VQSLOD=0.3896;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:31.42:31,0,103	0/0:6,0:6:18.06:0,18,344	0/0:32,0:29:86.90:0,87,1409	0/0:31,0:29:81.03:0,81,1421	0/0:22,0:22:65.57:0,66,1246	0/1:25,0:25:41.26:41,0,42	0/0:28,0:28:84.20:0,84,1568	0/0:29,0:29:84.28:0,84,1484	0/0:31,0:31:93.25:0,93,1699	0/0:31,0:31:93.32:0,93,1798	0/0:22,0:22:66.21:0,66,1244	0/1:10,17:27:55.22:435,0,55	1/1:6,27:33:71.65:819,72,0	1/1:3,22:25:44.82:608,45,0	0/0:26,0:26:78.23:0,78,1410	0/0:23,0:23:69.24:0,69,1336	0/0:21,0:21:63.16:0,63,1179	0/0:9,0:9:27.09:0,27,520	0/0:23,0:23:69.22:0,69,1210	0/0:23,0:23:68.70:0,69,1268	0/0:35,0:35:99:0,102,1961	1/1:7,10:17:5.64:324,6,0	0/1:7,9:16:5.03:278,0,5	1/1:5,16:21:29.45:474,29,0	1/1:5,12:17:19.80:365,20,0	0/1:26,0:26:29.05:67,0,29	0/0:31,0:31:93.32:0,93,1843	0/1:2,0:2:0.14:0,0,34
chr10	79897651	.	GT	G	1733.54	PASS	AB=0.629;AC=11;AF=0.196;AN=56;BaseQRankSum=16.203;DP=661;FS=0.375;HRun=2;HaplotypeScore=113.7030;InbreedingCoeff=0.6093;MQ=64.17;MQ0=0;MQRankSum=-2.347;QD=10.97;ReadPosRankSum=5.490;VQSLOD=1.9177;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:21.43:0,21,156	0/0:6,0:6:18.06:0,18,267	0/0:32,0:29:79.74:0,80,1178	0/0:29,0:28:72.23:0,72,1033	0/0:22,0:22:64.45:0,64,916	0/0:26,0:26:22.76:0,23,123	0/0:27,0:27:78.24:0,78,1123	0/0:29,0:29:81.27:0,81,1189	0/0:31,0:31:91.55:0,92,1335	0/0:32,0:32:93.29:0,93,1341	0/0:22,0:22:60.18:0,60,856	0/1:9,17:26:91.84:245,0,92	1/1:4,27:31:51.11:465,51,0	1/1:6,22:28:30.19:364,30,0	0/0:25,0:25:72.24:0,72,1066	0/0:26,0:26:78.25:0,78,1134	0/0:21,0:21:60.20:0,60,894	0/0:10,0:10:26.68:0,27,361	0/0:22,0:22:66.22:0,66,974	0/0:22,0:22:64.37:0,64,917	0/0:34,0:34:96.31:0,96,1410	0/1:8,10:18:10.87:182,0,11	0/1:7,9:16:32.55:146,0,33	1/1:7,16:23:10.95:296,11,0	1/1:4,12:16:6.92:202,7,0	0/0:26,0:26:26.87:0,27,133	0/0:31,0:31:90.30:0,90,1344	0/0:2,0:2:3.90:0,4,45
chr10	79897897	.	AAAAG	A	659.92	PASS	AB=0.971;AC=10;AF=0.179;AN=56;BaseQRankSum=5.549;DP=513;FS=1.274;HRun=0;HaplotypeScore=101.5540;InbreedingCoeff=0.3303;MQ=57.91;MQ0=3;MQRankSum=0.217;QD=3.88;ReadPosRankSum=0.551;VQSLOD=1.9436;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,1:38:74.77:440,75,0	0/0:8,0:8:21.06:0,21,445	0/0:9,0:8:24.05:0,24,454	0/0:8,0:5:15.05:0,15,349	0/0:20,0:20:45.14:0,45,1012	1/1:16,1:16:22.73:150,23,0	0/0:14,0:14:36.11:0,36,783	0/0:27,0:26:69.23:0,69,1487	0/0:16,0:16:36.11:0,36,773	0/0:23,0:23:57.14:0,57,1203	0/0:24,0:24:60.21:0,60,1371	0/0:15,0:15:10.43:0,10,37	0/1:15,1:16:11.42:37,0,11	0/0:11,0:11:6.23:0,6,15	0/0:14,0:14:33.09:0,33,683	0/0:15,0:15:39.12:0,39,890	0/0:27,0:26:66.14:0,66,1337	0/0:11,0:10:27.07:0,27,606	0/0:18,0:16:42.14:0,42,867	0/0:36,0:36:81.22:0,81,1768	0/0:11,0:11:21.07:0,21,493	0/1:18,0:17:4.44:4,0,14	0/1:21,1:22:23.24:23,0,50	0/1:9,0:9:3.88:4,0,7	0/1:24,2:25:13.76:104,0,14	0/1:24,0:24:47.89:48,0,185	0/0:29,0:29:72.21:0,72,1533	0/0:7,0:7:17.44:0,17,97
chr10	79897898	.	AAAG	A	2391.97	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=12.774;DP=514;FS=1.303;HRun=0;HaplotypeScore=86.5142;InbreedingCoeff=0.9186;MQ=57.97;MQ0=3;MQRankSum=0.002;QD=12.14;ReadPosRankSum=3.748;VQSLOD=3.3322;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,35:38:77.34:1084,77,0	0/0:8,0:8:24.05:0,24,421	0/0:9,0:8:24.02:0,24,402	0/0:8,0:5:15.05:0,15,299	0/0:21,0:21:60.11:0,60,1013	1/1:1,16:16:27.08:381,27,0	0/0:15,0:15:42.08:0,42,719	0/0:27,0:26:75.19:0,75,1346	0/0:16,0:16:48.05:0,48,763	0/0:23,0:23:66.17:0,66,1142	0/0:24,0:24:66.18:0,66,1207	1/1:15,0:15:18.61:79,19,0	1/1:16,0:16:30.45:144,30,0	1/1:10,0:10:0.94:42,1,0	0/0:14,0:14:42.09:0,42,704	0/0:15,0:15:45.11:0,45,806	0/0:28,0:27:75.02:0,75,1194	0/0:11,0:10:30.06:0,30,543	0/0:17,0:15:45.12:0,45,799	0/0:36,0:36:93.21:0,93,1648	0/0:9,0:9:24.07:0,24,459	1/1:17,0:16:33.74:149,34,0	1/1:22,0:22:41.48:184,41,0	1/1:8,1:9:19.15:115,19,0	1/1:26,0:25:46.49:235,46,0	1/1:27,0:27:3.62:190,4,0	0/0:29,0:29:83.23:0,83,1429	0/0:7,0:7:5.32:0,5,11
chr10	79897899	.	AAG	A	4359.56	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.687;DP=513;FS=2.172;HRun=0;HaplotypeScore=71.2042;InbreedingCoeff=0.9920;MQ=59.05;MQ0=3;MQRankSum=-1.306;QD=21.37;ReadPosRankSum=4.119;VQSLOD=4.7607;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:71.66:562,72,0	0/0:8,0:8:24.06:0,24,354	0/0:10,0:9:27.02:0,27,359	0/0:8,0:5:15.05:0,15,239	0/0:21,0:21:60.15:0,60,867	1/1:17,0:16:26.37:189,26,0	0/0:15,0:15:41.92:0,42,591	0/0:27,0:26:75.03:0,75,1089	0/0:16,0:16:47.64:0,48,635	0/0:23,0:23:66.18:0,66,967	0/0:24,0:24:66.19:0,66,989	1/1:3,12:15:27.48:331,27,0	1/1:3,13:16:35.73:449,36,0	1/1:1,9:10:14.99:209,15,0	0/0:14,0:14:42.12:0,42,611	0/0:15,0:15:45.13:0,45,672	0/0:28,0:27:74.78:0,75,979	0/0:11,0:10:30.07:0,30,452	0/0:17,0:15:44.96:0,45,647	0/0:35,0:35:93.21:0,93,1372	0/0:8,0:8:24.08:0,24,379	1/1:2,15:16:38.74:466,39,0	1/1:3,19:22:51.54:647,52,0	1/1:1,8:9:21.05:274,21,0	1/1:5,21:25:51.02:644,51,0	1/1:25,3:28:74.45:512,74,0	0/0:29,0:29:83.56:0,84,1194	1/1:7,0:7:16.47:74,16,0
chr10	79897900	.	AG	A	3071.25	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=15.949;DP=506;FS=1.204;HRun=1;HaplotypeScore=65.5220;InbreedingCoeff=0.9415;MQ=59.21;MQ0=3;MQRankSum=-2.734;QD=15.36;ReadPosRankSum=4.086;VQSLOD=3.6684;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:63.37:424,63,0	0/0:8,0:8:24.06:0,24,292	0/0:10,0:9:26.94:0,27,279	0/0:8,0:5:15.03:0,15,179	0/0:21,0:21:60.16:0,60,729	1/1:17,0:16:24.52:136,25,0	0/0:14,0:14:38.51:0,39,469	0/0:27,0:26:74.62:0,75,897	0/0:16,0:16:31.47:0,31,507	0/0:22,0:22:66.11:0,66,790	0/0:24,0:24:66.09:0,66,784	1/1:12,1:13:29.65:199,30,0	1/1:15,0:15:35.48:254,35,0	0/1:10,0:10:3.70:82,0,4	0/0:14,0:14:42.12:0,42,512	0/0:15,0:15:45.12:0,45,545	0/0:28,0:27:68.17:0,68,770	0/0:11,0:10:30.06:0,30,368	0/0:18,0:16:45.59:0,46,542	0/0:33,0:33:93.20:0,93,1102	0/0:8,0:8:24.08:0,24,306	1/1:16,1:16:38.57:278,39,0	1/1:20,2:22:50.70:336,51,0	1/1:9,0:9:20.73:137,21,0	1/1:24,1:24:49.98:319,50,0	1/1:3,25:28:80.98:878,81,0	0/0:29,0:29:70.64:0,71,918	1/1:0,7:7:18.06:249,18,0
chr10	79898137	.	GAAATGCTTAAT	G	2070.71	PASS	AB=0.565;AC=3;AF=0.054;AN=56;BaseQRankSum=8.204;DP=619;FS=6.671;HRun=0;HaplotypeScore=197.1780;InbreedingCoeff=0.5665;MQ=77.21;MQ0=0;MQRankSum=-6.269;QD=69.02;ReadPosRankSum=0.324;VQSLOD=2.5987;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.24:0,69,3871	0/0:10,0:10:27.09:0,27,1489	0/0:19,0:19:8.65:0,9,1718	0/0:12,0:12:25.53:0,26,1119	0/0:24,0:24:63.22:0,63,3241	0/0:29,0:29:84.29:0,84,4582	0/0:14,0:14:36.12:0,36,1933	0/0:20,0:20:57.19:0,57,2610	0/0:19,0:19:57.20:0,57,3140	0/0:41,0:41:99:0,117,6210	0/0:31,0:31:93.25:0,93,4807	0/0:30,0:30:84.29:0,84,4493	0/0:28,0:28:84.29:0,84,4566	0/0:24,0:24:69.24:0,69,3695	0/0:25,0:25:72.25:0,72,3964	0/0:21,0:21:54.19:0,54,2968	0/0:24,0:24:69.24:0,69,3602	0/0:17,0:17:45.15:0,45,2249	0/0:18,0:18:39.13:0,39,1910	0/0:29,0:29:81.28:0,81,4506	0/0:20,0:20:54.19:0,54,2996	0/0:20,0:20:45.14:0,45,2115	0/0:26,0:26:78.27:0,78,4225	0/0:18,0:18:51.18:0,51,2718	0/0:15,0:15:42.14:0,42,2334	0/1:6,20:26:99:1861,0,488	0/0:30,0:30:81.28:0,81,4047	1/1:0,4:4:9.03:307,9,0
chr10	79898696	.	C	CT	6104.51	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-9.251;DP=597;FS=22.220;HRun=8;HaplotypeScore=62.3308;InbreedingCoeff=0.9950;MQ=77.13;MQ0=0;MQRankSum=-3.043;QD=26.09;ReadPosRankSum=3.346;VQSLOD=3.3937;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:16:36.11:415,36,0	0/0:7,0:7:12:0,12,110	0/0:14,0:15:34.23:0,34,269	0/0:17,0:16:29.96:0,30,267	0/0:21,0:21:57.02:0,57,522	1/1:2,23:25:57.17:658,57,0	0/0:19,0:19:54.01:0,54,489	0/0:25,0:25:63.03:0,63,577	0/0:10,0:10:24.01:0,24,219	0/0:32,0:32:87.04:0,87,796	0/0:19,0:19:48:0,48,434	1/1:1,15:16:39.12:450,39,0	1/1:3,12:15:36.11:415,36,0	1/1:0,22:22:57.17:658,57,0	0/0:17,0:17:45.02:0,45,412	0/0:18,0:18:51.03:0,51,466	0/0:32,0:32:81.03:0,81,741	0/0:15,0:15:33.01:0,33,302	0/0:22,0:22:48.02:0,48,439	0/0:32,0:32:84.03:0,84,769	0/0:23,0:23:60.02:0,60,544	1/1:0,24:24:63.19:727,63,0	1/1:1,30:31:81.24:932,81,0	1/1:3,13:16:33.10:381,33,0	1/1:1,29:31:80.30:963,80,0	1/1:6,0:26:62.72:332,63,0	0/0:38,0:38:99:0,108,983	1/1:0,0:12:34.09:173,34,0
chr10	79899957	.	GCAACCAA	G	511.47	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=7.968;DP=697;FS=8.064;HRun=0;HaplotypeScore=147.9825;InbreedingCoeff=0.6056;MQ=60.37;MQ0=37;MQRankSum=3.208;QD=6.16;ReadPosRankSum=-2.550;VQSLOD=1.6492;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:69.38:0,69,627	0/0:11,0:11:23.96:0,24,201	0/0:50,0:21:20.20:0,20,375	0/1:44,0:25:40.15:40,0,327	0/0:13,0:13:30.43:0,30,235	0/0:23,0:23:23.83:0,24,401	0/0:42,0:40:92.72:0,93,774	0/0:11,0:10:24.02:0,24,220	0/0:15,0:15:44.40:0,44,649	0/0:26,0:25:56.78:0,57,662	0/0:11,0:11:26.97:0,27,229	0/0:31,0:30:62.30:0,62,675	0/0:34,0:34:90.81:0,91,758	0/0:27,0:26:61.40:0,61,559	0/0:32,0:32:90.05:0,90,1124	0/0:18,0:18:44.99:0,45,463	0/0:36,0:36:92.83:0,93,1059	0/0:44,0:44:99:0,117,1495	0/0:10,0:10:29.99:0,30,264	0/0:12,0:12:29.99:0,30,260	0/0:47,0:45:92.83:0,93,916	0/0:13,0:12:23.79:0,24,195	0/0:19,0:19:50.91:0,51,451	0/0:31,0:31:83.68:0,84,693	0/1:11,0:10:4.75:5,0,154	1/1:2,22:24:65.90:543,66,0	0/0:25,0:25:65.61:0,66,886	1/1:4,0:4:5.99:48,6,0
chr10	79900476	.	CTT	C	4328.83	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.565;DP=502;FS=3.077;HRun=4;HaplotypeScore=63.4883;InbreedingCoeff=0.9945;MQ=86.23;MQ0=0;MQRankSum=-2.418;QD=35.19;ReadPosRankSum=3.975;VQSLOD=4.2429;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,2266	0/0:5,0:5:15.05:0,15,281	0/0:27,0:27:63.18:0,63,1177	0/0:22,0:22:65.93:0,66,1054	0/0:21,0:21:63.22:0,63,1180	0/0:21,0:21:63.21:0,63,1150	0/0:17,0:17:51.17:0,51,937	0/0:23,0:23:63.20:0,63,1124	0/0:22,0:22:66.21:0,66,1205	0/0:9,0:9:27.09:0,27,479	0/0:14,0:14:39.13:0,39,721	1/1:1,11:12:30.10:442,30,0	1/1:0,11:11:27.09:398,27,0	1/1:2,23:25:57.19:840,57,0	0/0:13,0:13:39.13:0,39,725	0/0:7,0:7:18.06:0,18,337	0/0:23,0:23:66.17:0,66,1158	0/0:17,0:17:51.14:0,51,860	0/0:23,0:23:60.20:0,60,1078	0/0:14,0:14:42.12:0,42,753	0/0:22,0:22:57.20:0,57,1067	1/1:0,15:15:35.83:530,36,0	1/1:0,10:10:24.08:353,24,0	1/1:1,25:26:69.23:1016,69,0	1/1:0,24:24:51.17:751,51,0	0/0:10,0:10:30.10:0,30,562	0/0:18,0:18:54.19:0,54,1002	0/0:9,0:9:27.09:0,27,506
chr10	79901122	.	TA	T	6570.61	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.228;DP=619;FS=0.643;HRun=7;HaplotypeScore=61.9893;InbreedingCoeff=0.9993;MQ=81.50;MQ0=1;MQRankSum=0.377;QD=27.84;ReadPosRankSum=4.915;VQSLOD=5.2090;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:66.15:672,66,0	0/0:17,0:17:48.11:0,48,575	0/0:21,0:21:44.50:0,44,515	0/0:13,0:13:27.09:0,27,338	0/0:24,0:24:60.18:0,60,742	1/1:0,22:22:66.15:673,66,0	0/0:11,0:11:30.10:0,30,376	0/0:30,0:30:81.24:0,81,997	0/0:22,1:23:38.62:0,39,800	0/0:30,0:30:84.27:0,84,1054	0/0:25,0:25:69.22:0,69,868	1/1:2,23:25:66.14:673,66,0	1/1:2,24:26:66.15:673,66,0	1/1:2,21:23:63.14:643,63,0	0/0:15,0:15:45.14:0,45,566	0/0:26,0:26:75.23:0,75,929	0/0:15,0:15:39.12:0,39,490	0/0:15,0:15:42.09:0,42,510	0/0:32,0:32:93.30:0,93,1168	0/0:37,0:37:99:0,105,1319	0/0:12,0:12:33.11:0,33,414	1/1:1,21:22:63.14:643,63,0	1/1:4,24:27:72.16:734,72,0	1/1:0,10:10:27.06:275,27,0	1/1:3,23:26:69.14:697,69,0	1/1:1,21:22:63.14:643,63,0	0/0:37,0:37:99:0,99,1243	1/1:0,8:8:24.05:245,24,0
chr10	79901438	.	A	ACTTC	1793.79	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.013;DP=609;FS=7.786;HRun=0;HaplotypeScore=115.9532;InbreedingCoeff=0.9750;MQ=82.05;MQ0=0;MQRankSum=-0.788;QD=51.25;ReadPosRankSum=0.784;VQSLOD=4.7956;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.19:0,54,993	0/0:13,0:13:30.10:0,30,552	0/0:23,0:23:54.18:0,54,957	0/0:17,0:17:39.13:0,39,693	0/0:32,0:32:93.32:0,93,1691	0/0:38,0:38:99:0,111,1998	0/0:15,0:15:45.15:0,45,823	0/0:32,0:32:78.25:0,78,1363	0/0:22,0:22:63.20:0,63,1109	0/0:16,0:16:42.14:0,42,766	0/0:22,0:22:60.19:0,60,1073	0/0:19,0:19:57.18:0,57,1017	0/0:26,0:26:75.24:0,75,1340	0/0:20,0:20:60.21:0,60,1091	0/0:18,0:18:54.17:0,54,963	0/0:18,0:18:51.14:0,51,877	0/0:12,0:12:33.02:0,33,574	0/0:15,0:15:42.14:0,42,772	0/0:22,0:22:57.19:0,57,1006	0/0:31,0:31:78.24:0,78,1374	0/0:13,0:13:39.13:0,39,718	0/0:25,0:25:69.24:0,69,1261	0/0:24,0:24:66.23:0,66,1214	0/0:20,0:20:54.17:0,54,954	0/0:23,0:23:60.21:0,60,1104	1/1:7,19:27:11:1432,11,0	0/0:37,0:36:99:0,105,1880	1/1:2,6:8:18.06:475,18,0
chr10	79902074	.	GTTTCCACTGTATTAGGTA	G	17651.76	PASS	AB=0.964;AC=19;AF=0.339;AN=56;BaseQRankSum=16.084;DP=625;FS=3.330;HRun=0;HaplotypeScore=315.4864;InbreedingCoeff=0.9076;MQ=88.28;MQ0=0;MQRankSum=-16.256;QD=90.99;ReadPosRankSum=4.832;VQSLOD=4.2140;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,18:24:48.16:2463,48,0	0/0:17,0:17:48.16:0,48,3807	0/0:23,0:23:66.21:0,66,3717	0/0:31,0:31:87.10:0,87,4631	0/0:36,0:36:99:0,108,8208	1/1:3,14:17:33.11:1695,33,0	0/0:19,0:19:57.20:0,57,4323	0/0:33,0:33:93.31:0,93,6517	0/0:28,0:28:84.29:0,84,6943	0/0:25,0:25:75.26:0,75,6210	0/0:22,0:22:66.21:0,66,4916	1/1:5,12:17:30.10:1553,30,0	1/1:1,15:16:39.13:2025,39,0	1/1:5,25:30:66.22:3392,66,0	0/0:12,0:12:33.11:0,33,2634	0/0:18,0:18:54.19:0,54,4493	0/0:18,0:18:54.17:0,54,4094	0/0:18,0:18:54.19:0,54,3965	0/0:33,0:33:93.30:0,93,6141	0/0:33,0:33:99:0,99,8229	0/0:31,0:31:93.32:0,93,7437	1/1:4,16:20:42.14:2159,42,0	1/1:4,21:25:60.20:3071,60,0	1/1:4,4:8:8.56:448,9,0	1/1:3,7:10:15.05:771,15,0	0/1:26,1:27:74.69:75,0,6132	0/0:23,0:23:69.24:0,69,5838	0/0:11,0:11:30.09:0,30,2277
chr10	79903772	.	A	AG	4919.07	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=17.028;DP=582;FS=1.080;HRun=7;HaplotypeScore=81.0092;InbreedingCoeff=0.9990;MQ=73.20;MQ0=1;MQRankSum=-4.005;QD=22.36;ReadPosRankSum=2.801;VQSLOD=4.8192;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:15:28.84:152,29,0	0/0:11,0:11:30.05:0,30,290	0/0:25,0:24:24.74:0,25,254	0/0:16,0:15:39.06:0,39,375	0/0:25,0:25:63.09:0,63,608	1/1:5,0:30:68.97:350,69,0	0/0:15,0:15:45.04:0,45,424	0/0:40,0:40:96.11:0,96,915	0/0:15,0:15:36.04:0,36,341	0/0:26,0:26:69.11:0,69,666	0/0:24,0:24:66.10:0,66,637	1/1:0,21:21:51.16:611,51,0	1/1:2,15:17:51.14:598,51,0	1/1:0,10:10:27.08:324,27,0	0/0:15,0:15:42.03:0,42,395	0/0:17,0:17:48.05:0,48,453	0/0:17,0:17:47.84:0,48,430	0/0:9,0:9:24.02:0,24,225	0/0:30,0:30:78.07:0,78,731	0/0:32,0:32:90.13:0,90,865	0/0:12,0:12:33.02:0,33,308	1/1:1,15:16:33.10:396,33,0	1/1:2,17:19:44.85:522,45,0	1/1:0,12:12:36.11:432,36,0	1/1:1,27:29:81.11:951,81,0	1/1:5,0:29:66.15:337,66,0	0/0:33,0:32:96.15:0,96,927	1/1:5,0:21:48.75:246,49,0
chr10	79904082	.	G	GT	5475.54	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=16.231;DP=585;FS=0.355;HRun=3;HaplotypeScore=97.1630;InbreedingCoeff=0.9958;MQ=62.00;MQ0=0;MQRankSum=-1.688;QD=30.42;ReadPosRankSum=2.531;VQSLOD=4.5552;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,11:14:17.18:409,17,0	0/0:13,0:13:33.06:0,33,380	0/0:15,0:14:35.81:0,36,353	0/0:17,0:14:41.63:0,42,396	0/0:25,0:25:72.14:0,72,856	1/1:4,26:30:73.12:970,73,0	0/0:5,0:5:15.05:0,15,185	0/0:25,0:25:63.14:0,63,735	0/0:28,0:28:75.19:0,75,888	0/0:25,0:25:75.18:0,75,881	0/0:19,0:19:54.14:0,54,633	1/1:2,12:14:33.11:440,33,0	1/1:2,19:22:54.13:704,54,0	1/1:5,23:28:67.10:888,67,0	0/0:26,0:26:78.22:0,78,940	0/0:22,0:22:60.16:0,60,712	0/0:22,0:22:57.86:0,58,767	0/0:19,0:19:54.07:0,54,625	0/0:18,0:18:48.13:0,48,571	0/0:25,0:25:75.20:0,75,884	0/0:17,0:17:48.12:0,48,568	1/1:3,17:20:46.87:613,47,0	1/1:5,12:19:37.31:462,37,0	1/1:2,11:13:30.06:383,30,0	1/1:4,16:20:45.15:605,45,0	0/0:33,0:33:99:0,99,1184	0/0:38,0:38:99:0,107,1253	0/0:13,0:13:39.11:0,39,471
chr10	79904760	.	GA	G	1155.03	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.026;DP=525;FS=6.684;HRun=8;HaplotypeScore=79.4658;InbreedingCoeff=0.9946;MQ=61.10;MQ0=3;MQRankSum=-0.395;QD=20.63;ReadPosRankSum=2.151;VQSLOD=3.9674;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:16:27.04:261,27,0	0/0:12,0:12:33.10:0,33,399	0/0:21,0:16:36.66:0,37,359	0/0:15,0:10:23.20:0,23,272	0/0:24,0:24:72.22:0,72,869	0/0:17,0:17:45.14:0,45,544	0/0:19,0:19:57.11:0,57,651	0/0:29,0:29:78.23:0,78,930	0/0:25,0:25:72.22:0,72,869	0/0:27,0:27:75.23:0,75,905	0/0:14,0:14:39.11:0,39,462	0/0:11,0:11:33.10:0,33,397	0/0:13,0:13:30.09:0,30,362	0/0:20,0:20:60.18:0,60,725	0/0:20,0:19:48.13:0,48,568	0/0:21,0:21:60.18:0,60,725	0/0:19,0:19:47.98:0,48,557	0/0:12,0:12:26.84:0,27,325	0/0:14,0:14:36.11:0,36,435	0/0:30,0:30:84.26:0,84,1012	0/0:18,0:18:48.13:0,48,566	0/0:11,0:11:30.09:0,30,358	0/0:20,0:19:51.15:0,51,604	0/0:12,0:12:30.08:0,30,352	0/0:18,0:18:39.12:0,39,471	1/1:2,20:22:60.10:579,60,0	0/0:26,0:27:80.92:0,81,953	1/1:1,17:18:18.05:456,18,0
chr10	79905133	.	AT	A	1029.51	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.728;DP=459;FS=1.421;HRun=4;HaplotypeScore=68.5571;InbreedingCoeff=0.9806;MQ=61.24;MQ0=0;MQRankSum=0.192;QD=31.20;ReadPosRankSum=1.750;VQSLOD=4.2524;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.15:0,51,669	0/0:9,0:9:27.09:0,27,378	0/0:13,0:13:33.11:0,33,459	0/0:15,0:15:40.90:0,41,493	0/0:23,0:23:66.20:0,66,891	0/0:19,0:19:48.16:0,48,635	0/0:18,0:18:48.15:0,48,656	0/0:31,0:31:93.31:0,93,1302	0/0:13,0:13:36.12:0,36,504	0/0:18,0:18:54.18:0,54,744	0/0:18,0:18:51.17:0,51,714	0/0:14,0:14:36.58:0,37,465	0/0:12,0:12:33.07:0,33,427	0/0:8,0:7:21.07:0,21,276	0/0:14,0:14:39.13:0,39,546	0/0:18,0:18:51.17:0,51,714	0/0:20,0:20:31.26:0,31,614	0/0:5,0:5:12.04:0,12,168	0/0:20,0:20:57.17:0,57,768	0/0:27,0:27:78.24:0,78,1049	0/0:14,0:14:39.13:0,39,546	0/0:15,0:15:45.14:0,45,589	0/0:15,0:15:41.48:0,41,504	0/0:9,0:8:27.09:0,27,362	0/0:18,0:18:48.16:0,48,639	1/1:0,17:17:51.16:611,51,0	0/0:22,0:22:60.18:0,60,806	1/1:0,16:16:45.14:540,45,0
chr10	79905295	.	ATTCTAAAATACTTGC	A	9868.66	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.893;DP=412;FS=24.441;HRun=0;HaplotypeScore=184.1066;InbreedingCoeff=0.9611;MQ=91.69;MQ0=0;MQRankSum=-13.120;QD=107.27;ReadPosRankSum=-2.526;VQSLOD=2.4509;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:18.06:739,18,0	0/0:7,0:7:21.07:0,21,1571	0/0:26,0:26:78.18:0,78,4248	0/0:26,0:26:74.75:0,75,3866	0/0:23,0:23:69.24:0,69,4631	1/1:0,16:16:39.13:1740,39,0	0/0:15,0:15:45.15:0,45,2977	0/0:25,0:25:72.25:0,72,4515	0/0:18,0:18:54.19:0,54,3956	0/0:13,0:13:39.13:0,39,2597	0/0:12,0:12:36.12:0,36,2600	1/1:0,8:8:12.04:558,12,0	1/1:0,7:7:18.06:837,18,0	1/1:0,4:4:9.03:343,9,0	0/0:20,0:20:60.21:0,60,4397	0/0:18,0:18:54.19:0,54,3605	0/0:3,0:3:6.02:0,6,459	0/0:9,0:9:27.09:0,27,2004	0/0:28,0:28:84.29:0,84,5541	0/0:16,0:16:48.16:0,48,3422	0/0:16,0:16:48.16:0,48,3364	1/1:0,17:17:45.15:2016,45,0	1/1:0,8:8:24.08:889,24,0	1/1:0,6:6:12.04:558,12,0	1/1:1,18:19:54.19:2188,54,0	0/0:15,0:15:45.15:0,45,3209	0/0:20,0:20:60.19:0,60,4009	0/0:10,0:10:30.10:0,30,1924
chr10	79905327	.	AAC	A	484.35	PASS	AB=0.931;AC=26;AF=0.619;AN=42;BaseQRankSum=-0.051;DP=468;FS=0.000;HRun=0;HaplotypeScore=132.9396;InbreedingCoeff=0.2876;MQ=55.38;MQ0=14;MQRankSum=1.795;QD=2.13;ReadPosRankSum=-0.769;VQSLOD=2.2511;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:7,1:7:25.62:26,0,37	./.	./.	1/1:17,1:20:8.84:69,9,0	./.	0/0:16,0:16:9.01:0,9,97	0/0:20,0:20:0.89:0,1,2	1/1:16,1:15:3.01:32,3,0	1/1:12,0:13:7.25:55,7,0	1/1:12,0:11:8.98:73,9,0	0/1:14,0:14:0:0,0,0	0/0:9,0:9:2.94:0,3,18	0/1:12,0:10:0:0,0,0	1/1:24,0:23:14.91:112,15,0	1/1:14,0:13:8.92:64,9,0	0/0:8,0:8:0.92:0,1,53	1/1:8,3:11:2.99:24,3,0	1/1:21,0:21:5.99:52,6,0	1/1:9,3:12:3.48:32,3,0	1/1:18,0:20:2.84:14,3,0	./.	./.	0/0:14,0:13:2.88:0,3,23	./.	0/0:12,0:12:0.47:0,0,1	0/1:16,4:19:25.64:26,0,38	1/1:8,0:8:2.96:25,3,0
chr10	79905900	.	A	AAG	430.29	PASS	AB=0.960;AC=8;AF=0.143;AN=56;BaseQRankSum=5.849;DP=588;FS=35.405;HRun=0;HaplotypeScore=88.5572;InbreedingCoeff=-0.1651;MQ=78.66;MQ0=0;MQRankSum=-10.026;QD=2.71;ReadPosRankSum=1.023;VQSLOD=0.3784;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:15.89:16,0,456	0/0:13,0:13:39.12:0,39,585	0/0:22,0:22:66.22:0,66,955	0/0:24,0:24:64.23:0,64,797	0/0:35,0:35:99:0,105,1577	0/1:20,0:20:74.73:75,0,503	0/0:14,0:14:42.09:0,42,567	0/0:28,0:28:81.27:0,81,1248	0/0:22,0:22:63.21:0,63,984	0/0:28,0:28:84.26:0,84,1273	0/0:21,0:21:63.21:0,63,978	0/1:18,0:18:59.78:60,0,441	0/1:23,0:23:68.71:69,0,561	0/1:13,0:13:99:125,0,105	0/0:24,0:24:72.25:0,72,1126	0/0:19,0:18:57.19:0,57,891	0/0:6,0:6:18.06:0,18,280	0/0:11,0:11:30.05:0,30,421	0/0:22,0:22:63.20:0,63,946	0/0:25,0:25:69.20:0,69,1033	0/0:19,0:19:54.18:0,54,844	0/1:22,0:22:11.35:11,0,210	0/0:26,0:26:18.05:0,18,280	0/1:8,7:15:24.54:25,0,164	0/1:33,0:33:99:186,0,607	0/0:21,0:21:63.20:0,63,945	0/0:31,0:29:93.28:0,93,1387	0/0:18,0:18:54.13:0,54,775
chr10	79906066	.	TGAA	T	1636.84	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.561;DP=611;FS=1.323;HRun=0;HaplotypeScore=147.5941;InbreedingCoeff=0.9967;MQ=66.56;MQ0=0;MQRankSum=-2.172;QD=38.07;ReadPosRankSum=2.783;VQSLOD=4.7694;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:30.37:0,30,521	0/0:8,0:8:21.07:0,21,459	0/0:26,0:26:63.19:0,63,1209	0/0:18,0:16:27.09:0,27,571	0/0:40,0:40:99:0,111,2392	0/0:26,0:26:72.22:0,72,862	0/0:12,0:12:33.11:0,33,721	0/0:26,0:26:63.20:0,63,1300	0/0:20,0:20:51.18:0,51,1115	0/0:33,0:33:87.30:0,87,1868	0/0:26,0:26:72.25:0,72,1544	0/0:21,0:21:51.16:0,51,611	0/0:19,0:19:54.17:0,54,646	0/0:25,0:25:66.18:0,66,776	0/0:20,0:20:60.19:0,60,1255	0/0:20,0:20:57.20:0,57,1246	0/0:20,0:20:57.20:0,57,1246	0/0:13,0:13:33.09:0,33,678	0/0:18,0:18:54.18:0,54,1087	0/0:45,0:45:99:0,120,2573	0/0:11,0:11:33.11:0,33,722	0/0:17,0:17:42.13:0,42,502	0/0:23,0:23:57.17:0,57,682	0/0:14,0:13:36.11:0,36,431	0/0:17,0:17:48.15:0,48,575	1/1:2,21:23:63.21:997,63,0	0/0:30,0:30:87.28:0,87,1862	1/1:1,19:20:48.16:761,48,0
chr10	79906074	.	A	AT	7917.08	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=10.139;DP=600;FS=2.365;HRun=0;HaplotypeScore=96.1874;InbreedingCoeff=0.9993;MQ=64.68;MQ0=0;MQRankSum=-7.256;QD=43.74;ReadPosRankSum=1.264;VQSLOD=4.9873;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:51.04:781,51,0	0/0:7,0:7:21.07:0,21,294	0/0:23,0:22:61.73:0,62,791	0/0:16,0:14:36.12:0,36,481	0/0:38,0:38:99:0,114,1592	1/1:1,26:27:72.25:1150,72,0	0/0:13,0:13:39.13:0,39,543	0/0:25,0:25:72.23:0,72,992	0/0:18,0:18:54.18:0,54,755	0/0:29,0:29:87.28:0,87,1189	0/0:26,0:26:69.22:0,69,949	1/1:0,19:19:54.18:863,54,0	1/1:0,21:21:60.20:958,60,0	1/1:0,25:25:69.24:1102,69,0	0/0:18,0:18:54.18:0,54,755	0/0:21,0:21:60.20:0,60,837	0/0:20,0:20:60.20:0,60,839	0/0:11,0:11:33.09:0,33,442	0/0:22,0:22:66.09:0,66,866	0/0:42,0:42:99:0,120,1664	0/0:13,0:13:39.13:0,39,545	1/1:0,15:15:42.14:670,42,0	1/1:1,24:25:63.21:1005,63,0	1/1:0,14:13:36.12:575,36,0	1/1:0,17:17:51.17:814,51,0	0/0:23,0:23:63.74:0,64,328	0/0:32,0:32:96.32:0,96,1341	0/0:22,0:22:52.94:0,53,320
chr10	79906443	.	C	CT	525.16	PASS	AC=4;AF=0.100;AN=40;BaseQRankSum=6.515;DP=219;FS=18.247;HRun=8;HaplotypeScore=36.2502;InbreedingCoeff=0.7885;MQ=66.05;MQ0=7;MQRankSum=-0.670;QD=22.83;ReadPosRankSum=4.454;VQSLOD=2.0371;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:1,0:1:3.01:0,3,42	0/0:7,0:6:18.03:0,18,232	0/0:7,0:6:15.29:0,15,138	0/0:9,0:9:27.09:0,27,372	./.	0/0:8,0:8:18.06:0,18,251	0/0:26,0:26:75.25:0,75,1038	0/0:15,0:15:42.14:0,42,573	0/0:14,0:12:36.12:0,36,501	0/0:19,0:19:54.18:0,54,755	./.	./.	./.	0/0:6,0:6:18.06:0,18,247	0/0:3,0:3:9.03:0,9,124	0/0:13,0:13:39.13:0,39,542	0/0:13,0:13:30.10:0,30,410	0/0:14,0:12:36.12:0,36,501	0/0:16,0:16:45.15:0,45,625	0/0:11,0:10:24.08:0,24,336	./.	./.	./.	0/0:1,0:1:3.01:0,3,35	1/1:2,5:6:15.04:173,15,0	0/0:8,0:7:21.07:0,21,293	1/1:2,14:15:30.18:464,30,0
chr10	79914018	.	C	CCTT	11331.68	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.698;DP=546;FS=25.297;HRun=0;HaplotypeScore=102.5904;InbreedingCoeff=0.9986;MQ=82.85;MQ0=0;MQRankSum=-10.488;QD=59.96;ReadPosRankSum=-1.701;VQSLOD=3.5677;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,15:19:22.05:831,22,0	0/0:9,0:9:27.09:0,27,476	0/0:23,0:23:60.19:0,60,993	0/0:21,0:21:56.18:0,56,891	0/0:27,0:27:78.27:0,78,1374	1/1:2,29:32:78.22:1782,78,0	0/0:16,0:16:42.14:0,42,736	0/0:24,0:24:72.24:0,72,1242	0/0:24,0:24:69.24:0,69,1211	0/0:21,0:21:63.22:0,63,1104	0/0:18,0:18:54.18:0,54,925	1/1:4,13:18:48.16:1100,48,0	1/1:2,14:16:42.14:992,42,0	1/1:1,31:33:93.32:2179,93,0	0/0:23,0:22:69.23:0,69,1186	0/0:13,0:13:39.13:0,39,688	0/0:10,0:10:30.10:0,30,529	0/0:9,0:9:24.08:0,24,423	0/0:24,0:24:72.24:0,72,1219	0/0:28,0:28:81.26:0,81,1380	0/0:9,0:9:27.06:0,27,419	1/1:0,11:12:36.12:850,36,0	1/1:6,27:33:90.02:1942,90,0	1/1:4,6:11:27.09:594,27,0	1/1:0,15:15:45.15:1061,45,0	0/0:19,0:19:57.19:0,57,980	0/0:25,0:25:75.26:0,75,1323	0/0:14,0:14:42.14:0,42,741
chr10	79914564	.	A	ACT	4600.38	PASS	AB=0.705;AC=11;AF=0.196;AN=56;BaseQRankSum=12.190;DP=636;FS=4.782;HRun=0;HaplotypeScore=129.0343;InbreedingCoeff=-0.2447;MQ=66.48;MQ0=0;MQRankSum=-13.684;QD=16.55;ReadPosRankSum=-1.193;VQSLOD=4.5371;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,4:20:99:146,0,515	0/0:15,0:15:45.15:0,45,727	0/0:18,0:18:48.04:0,48,650	0/0:15,0:15:39.02:0,39,559	0/0:31,0:31:90.29:0,90,1438	0/1:27,14:41:99:538,0,1104	0/0:8,0:8:21.07:0,21,340	0/0:35,0:35:99:0,102,1650	0/0:16,0:16:48.13:0,48,734	0/0:21,0:21:63.21:0,63,1006	0/0:28,0:28:84.29:0,84,1365	0/1:8,13:21:99:494,0,309	0/1:20,10:30:99:465,0,814	0/1:17,12:29:99:509,0,693	0/0:20,0:20:57.19:0,57,922	0/0:13,0:13:39.12:0,39,609	0/0:14,0:14:42.14:0,42,680	0/0:19,0:19:57.19:0,57,913	0/0:24,0:24:69.24:0,69,1117	0/0:24,0:24:72.25:0,72,1168	0/0:23,0:23:63.20:0,63,988	0/1:14,15:29:99:484,0,554	0/1:15,10:25:99:263,0,617	0/1:8,6:14:99:233,0,258	0/1:12,15:27:99:528,0,505	0/1:15,13:28:99:664,0,645	0/0:34,0:34:99:0,102,1636	0/1:8,6:14:99:275,0,298
chr10	79915237	.	TA	T	5174.47	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=16.797;DP=659;FS=1.844;HRun=8;HaplotypeScore=73.6132;InbreedingCoeff=0.9988;MQ=74.30;MQ0=2;MQRankSum=-1.485;QD=25.00;ReadPosRankSum=2.965;VQSLOD=5.7256;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:57.09:550,57,0	0/0:14,0:14:42.13:0,42,507	0/0:15,0:14:33.07:0,33,375	0/0:15,0:15:41.36:0,41,455	0/0:29,0:29:82.09:0,82,945	1/1:0,27:27:81.13:782,81,0	0/0:12,0:12:27.08:0,27,326	0/0:33,0:33:90.27:0,90,1078	0/0:27,0:27:72.18:0,72,853	0/0:40,0:40:99:0,105,1257	0/0:35,0:35:99:0,99,1195	1/1:1,19:20:45.07:435,45,0	1/1:2,19:21:57.09:550,57,0	1/1:4,18:22:48.07:464,48,0	0/0:24,0:24:72.21:0,72,860	0/0:17,0:17:42.12:0,42,497	0/0:11,0:10:24.07:0,24,290	0/0:28,0:28:72.22:0,72,867	0/0:15,0:15:39.11:0,39,463	0/0:42,0:42:99:0,117,1402	0/0:18,0:18:48.15:0,48,580	1/1:2,25:27:72.06:686,72,0	1/1:2,29:31:84.13:811,84,0	1/1:1,6:7:21.03:202,21,0	1/1:4,24:28:72.11:695,72,0	0/0:26,0:25:75.23:0,75,905	0/0:30,0:30:84.24:0,84,1002	0/0:21,0:21:63.19:0,63,761
chr10	79915661	.	TTG	T	10575.09	PASS	AB=0.514;AC=21;AF=0.375;AN=56;BaseQRankSum=19.323;DP=626;FS=2.086;HRun=0;HaplotypeScore=121.5014;InbreedingCoeff=0.9366;MQ=71.62;MQ0=0;MQRankSum=-8.531;QD=43.52;ReadPosRankSum=4.890;VQSLOD=5.8118;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:78.24:1171,78,0	0/0:18,0:18:54.17:0,54,1060	0/0:17,0:17:50.07:0,50,770	0/0:21,0:21:63.10:0,63,1116	0/0:27,0:27:78.25:0,78,1548	1/1:0,22:22:57.19:872,57,0	0/0:20,0:20:60.20:0,60,1184	0/0:34,0:34:99:0,102,1974	0/0:21,0:21:63.22:0,63,1280	0/0:22,0:22:66.23:0,66,1341	0/0:25,0:25:75.25:0,75,1488	1/1:0,17:17:51.17:781,51,0	1/1:0,33:33:96.33:1469,96,0	1/1:0,25:25:75.25:1146,75,0	0/0:24,0:24:72.25:0,72,1463	0/0:23,0:23:69.24:0,69,1402	0/0:32,0:32:96.33:0,96,1931	0/0:7,0:7:21.07:0,21,427	0/0:17,0:17:39.07:0,39,906	0/0:30,0:30:90.30:0,90,1776	0/0:22,0:22:66.23:0,66,1322	1/1:0,18:18:51.17:783,51,0	1/1:2,22:24:63.21:963,63,0	1/1:0,17:17:48.16:735,48,0	1/1:0,27:27:81.28:1240,81,0	0/1:1,17:18:6.80:726,0,7	0/0:23,0:23:69.24:0,69,1395	1/1:0,15:15:45.15:689,45,0
chr10	79916494	.	GGGGA	G	892.05	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=5.563;DP=405;FS=5.019;HRun=0;HaplotypeScore=109.1568;InbreedingCoeff=0.6123;MQ=78.19;MQ0=0;MQRankSum=-6.914;QD=10.49;ReadPosRankSum=-0.877;VQSLOD=2.3591;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:28.78:0,29,170	0/0:5,0:5:15.05:0,15,355	0/0:20,0:19:46.68:0,47,1002	0/0:21,0:19:34.63:0,35,669	0/0:17,0:17:48.16:0,48,1158	1/1:3,17:20:45.15:740,45,0	0/0:19,0:19:54.17:0,54,1260	0/0:11,0:11:29.95:0,30,513	0/0:9,0:9:24.08:0,24,590	0/0:9,0:9:24.08:0,24,586	0/0:5,0:5:12.04:0,12,267	0/1:21,0:21:25.61:45,0,26	0/0:18,0:18:24.88:0,25,69	0/0:21,0:21:10.71:0,11,48	0/0:14,0:14:42.14:0,42,1069	0/0:14,0:14:39.11:0,39,892	0/0:14,0:14:39.13:0,39,949	0/0:5,0:5:12.04:0,12,258	0/0:15,0:15:39.13:0,39,863	0/0:6,0:6:15.05:0,15,352	0/0:29,0:29:81.24:0,81,1940	0/1:12,0:12:1.14:1,0,18	0/1:11,0:11:5.06:5,0,16	0/0:21,0:21:10.18:0,10,44	0/0:11,0:11:7.77:0,8,22	1/1:17,0:17:36.46:194,36,0	0/0:14,0:14:42.14:0,42,869	1/1:4,0:4:11.19:54,11,0
chr10	79916495	.	GGGA	G	2083.26	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=13.875;DP=403;FS=8.500;HRun=0;HaplotypeScore=97.0847;InbreedingCoeff=0.9100;MQ=78.27;MQ0=0;MQRankSum=-10.003;QD=11.64;ReadPosRankSum=2.353;VQSLOD=2.7624;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:13.22:13,0,13	0/0:5,0:5:15.05:0,15,317	0/0:20,0:19:37.08:0,37,869	0/0:21,0:19:32.80:0,33,594	0/0:17,0:17:48.16:0,48,964	1/1:20,0:20:44.03:350,44,0	0/0:19,0:19:54.16:0,54,1062	0/0:11,0:11:29.95:0,30,469	0/0:8,0:8:24.08:0,24,491	0/0:9,0:9:24.08:0,24,487	0/0:5,0:5:12.04:0,12,229	1/1:21,0:21:50.80:241,51,0	1/1:18,0:18:41.54:162,42,0	1/1:20,1:21:39.17:195,39,0	0/0:14,0:14:42.14:0,42,896	0/0:13,0:13:39.11:0,39,756	0/0:13,0:13:39.12:0,39,781	0/0:5,0:5:12.04:0,12,235	0/0:14,0:14:39.13:0,39,776	0/0:6,0:6:18.04:0,18,327	0/0:30,0:30:87.19:0,87,1667	1/1:11,1:12:26.60:144,27,0	1/1:12,0:12:21.13:90,21,0	1/1:19,2:21:39.36:190,39,0	1/1:11,0:11:15.95:70,16,0	1/1:0,17:17:48.09:654,48,0	0/0:14,0:14:42.12:0,42,768	1/1:0,4:4:12.04:192,12,0
chr10	79916496	.	GGA	G	4504.81	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.127;DP=409;FS=5.772;HRun=0;HaplotypeScore=82.5854;InbreedingCoeff=0.9815;MQ=78.04;MQ0=0;MQRankSum=-8.101;QD=24.89;ReadPosRankSum=2.677;VQSLOD=5.4580;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,3:25:29.98:183,30,0	0/0:5,0:5:15.05:0,15,254	0/0:19,0:18:47.18:0,47,728	0/0:22,0:20:41.41:0,41,531	0/0:17,0:17:48.12:0,48,765	1/1:20,0:20:42.41:276,42,0	0/0:19,0:19:54.14:0,54,862	0/0:11,0:11:24.14:0,24,377	0/0:8,0:8:24.07:0,24,386	0/0:11,0:11:30.08:0,30,448	0/0:5,0:5:12.04:0,12,190	1/1:5,16:21:56.60:706,57,0	1/1:3,15:18:48.16:692,48,0	1/1:4,17:21:45.08:598,45,0	0/0:14,0:14:42.14:0,42,724	0/0:13,0:13:39.11:0,39,621	0/0:13,0:13:39.12:0,39,627	0/0:5,0:5:12.04:0,12,197	0/0:14,0:14:42.13:0,42,668	0/0:7,0:7:21.04:0,21,297	0/0:31,0:31:90.18:0,90,1381	1/1:1,11:12:30.07:410,30,0	1/1:2,10:12:24.03:322,24,0	1/1:4,16:20:48.09:648,48,0	1/1:0,11:11:18.02:236,18,0	1/1:17,0:17:47.52:346,48,0	0/0:14,0:14:42.09:0,42,611	1/1:4,0:4:11.93:88,12,0
chr10	79916497	.	GA	G	2344.90	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.559;DP=400;FS=6.501;HRun=1;HaplotypeScore=80.0197;InbreedingCoeff=0.9811;MQ=77.56;MQ0=0;MQRankSum=-10.001;QD=13.40;ReadPosRankSum=2.917;VQSLOD=2.7773;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:32.66:358,33,0	0/0:5,0:5:15.04:0,15,192	0/0:20,0:19:29.88:0,30,589	0/0:20,0:18:42.73:0,43,466	0/0:17,0:17:47.15:0,47,571	1/1:19,0:19:37.79:192,38,0	0/0:19,0:19:54.10:0,54,681	0/0:11,0:11:27.12:0,27,336	0/0:8,0:8:24.06:0,24,305	0/0:10,0:10:30.08:0,30,369	0/0:5,0:5:11.97:0,12,138	1/1:21,0:21:55.82:361,56,0	1/1:15,2:17:47.27:299,47,0	1/1:18,2:20:44.14:273,44,0	0/0:14,0:14:42.14:0,42,567	0/0:13,0:13:39.11:0,39,500	0/0:13,0:13:38.98:0,39,485	0/0:5,0:5:12.04:0,12,153	0/0:14,0:14:42.13:0,42,535	0/0:7,0:7:21.03:0,21,237	0/0:30,0:30:90.18:0,90,1116	1/1:12,0:12:29.46:182,29,0	1/1:10,0:10:23.65:150,24,0	1/1:18,1:19:47.24:298,47,0	1/1:11,0:11:17.75:113,18,0	1/1:17,0:17:46.49:279,46,0	0/0:14,0:14:42.08:0,42,497	1/1:4,0:4:11.61:64,12,0
chr10	79916569	.	GTGGTGGTGGTGGTGA	G	6968.08	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=7.517;DP=424;FS=3.643;HRun=0;HaplotypeScore=176.7039;InbreedingCoeff=0.7327;MQ=53.09;MQ0=19;MQRankSum=-6.207;QD=42.75;ReadPosRankSum=0.655;VQSLOD=4.4372;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:52.52:0,53,1695	0/0:2,0:1:3.01:0,3,158	0/1:7,0:4:28.96:29,0,29	0/0:12,0:11:8.85:0,9,218	0/0:9,0:9:24.08:0,24,1405	0/1:19,0:19:99:178,0,239	0/0:18,0:14:33.11:0,33,1387	0/0:18,0:16:28.21:0,28,621	0/0:13,0:13:33.11:0,33,1958	0/0:16,0:14:27.09:0,27,1066	0/0:6,0:5:11.97:0,12,259	1/1:14,11:24:46.60:1625,47,0	1/1:10,7:19:45.11:1499,45,0	1/1:15,10:26:48.02:1719,48,0	0/0:13,0:13:33.11:0,33,1859	0/0:13,0:13:33.11:0,33,1830	0/0:14,0:14:40.89:0,41,1518	0/0:8,0:8:24.08:0,24,1134	0/0:11,0:11:22.32:0,22,585	0/0:11,0:11:28.34:0,28,1269	0/0:45,0:38:96.25:0,96,3039	1/1:13,3:16:28.05:786,28,0	1/1:9,3:11:17.98:589,18,0	1/1:21,3:24:23.05:415,23,0	1/1:1,14:14:3.01:128,3,0	0/0:16,0:14:22.89:0,23,985	0/0:5,0:5:15.03:0,15,482	0/0:5,0:5:6.53:0,7,236
chr10	79917707	.	A	AT	562	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=7.452;DP=418;FS=17.532;HRun=7;HaplotypeScore=47.8714;InbreedingCoeff=0.4681;MQ=76.63;MQ0=3;MQRankSum=0.835;QD=8.65;ReadPosRankSum=0.238;VQSLOD=0.1314;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.02:0,54,509	0/0:5,0:5:15.02:0,15,145	0/1:24,0:16:11.14:11,0,141	0/1:17,0:9:6.32:6,0,65	0/0:25,0:25:75.12:0,75,724	0/0:17,0:17:48.08:0,48,463	0/0:14,0:14:36.05:0,36,347	0/0:30,0:30:78.10:0,78,744	0/0:14,0:14:42.06:0,42,401	0/0:15,0:15:36.05:0,36,348	0/0:18,0:18:51.08:0,51,492	0/0:11,0:11:24.03:0,24,232	0/0:8,0:8:21.02:0,21,196	0/0:10,0:10:21.03:0,21,203	0/0:10,0:10:27.03:0,27,255	0/0:9,0:9:24.01:0,24,222	0/0:16,0:16:45.07:0,45,434	0/0:12,0:12:36.04:0,36,342	0/0:13,0:13:30.03:0,30,286	0/0:21,0:21:54.08:0,54,521	0/0:6,0:6:18.01:0,18,166	0/0:6,0:6:15.02:0,15,145	0/0:19,0:19:48.06:0,48,459	0/0:4,0:4:9.01:0,9,87	1/1:2,22:24:54.17:652,54,0	0/0:13,0:13:39.06:0,39,377	0/0:22,0:22:54.06:0,54,515	0/0:15,0:15:41.89:0,42,377
chr10	79917729	.	CT	C	1361.97	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=7.947;DP=443;FS=0.000;HRun=8;HaplotypeScore=51.1364;InbreedingCoeff=0.8680;MQ=75.37;MQ0=3;MQRankSum=2.472;QD=16.41;ReadPosRankSum=0.411;VQSLOD=3.2919;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.22:0,81,955	0/0:5,0:5:15.05:0,15,181	0/1:20,0:15:16.43:16,0,115	0/0:20,0:12:6.45:0,6,165	0/0:27,0:27:72.22:0,72,869	0/0:17,0:17:51.16:0,51,616	0/0:13,0:13:30.09:0,30,362	0/0:29,0:29:75.21:0,75,885	0/0:14,0:14:36.11:0,36,434	0/0:15,0:15:45.13:0,45,531	0/0:21,0:21:54.17:0,54,652	1/1:2,9:11:24.04:232,24,0	1/1:1,7:8:21.03:202,21,0	1/1:0,11:11:27.04:261,27,0	0/0:11,0:11:27.08:0,27,326	0/0:5,0:5:12.04:0,12,145	0/0:18,0:18:54.11:0,54,624	0/0:16,0:16:42.12:0,42,494	0/0:17,0:17:42.12:0,42,497	0/0:30,0:30:81.24:0,81,968	0/0:5,0:5:12.04:0,12,145	1/1:0,9:9:27.04:260,27,0	1/1:4,13:17:39.05:377,39,0	1/1:0,7:7:21.03:203,21,0	0/0:22,0:22:61.36:0,61,365	0/0:15,0:15:42.13:0,42,507	0/0:19,0:19:57.16:0,57,676	0/0:12,0:12:33.09:0,33,386
chr10	79918392	.	A	AT	2816.08	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-11.226;DP=567;FS=5.280;HRun=0;HaplotypeScore=53.5212;InbreedingCoeff=0.9968;MQ=80.04;MQ0=0;MQRankSum=-2.543;QD=39.66;ReadPosRankSum=3.513;VQSLOD=4.1042;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:18.06:266,18,0	0/0:9,0:9:27.07:0,27,345	0/0:15,0:15:45.14:0,45,598	0/0:15,0:15:44.99:0,45,536	0/0:29,0:29:87.28:0,87,1191	1/1:0,23:23:69.23:1056,69,0	0/0:23,0:23:66.19:0,66,886	0/0:21,0:21:63.18:0,63,823	0/0:22,0:22:66.19:0,66,871	0/0:35,0:35:99:0,102,1333	0/0:24,0:23:66.21:0,66,899	0/0:16,0:16:48.14:0,48,636	0/0:34,0:34:96.24:0,96,1250	0/0:25,0:25:72.22:0,72,968	0/0:33,0:33:99:0,99,1381	0/0:17,0:17:51.16:0,51,694	0/0:13,0:13:35.99:0,36,444	0/0:16,0:16:48.13:0,48,644	0/0:22,0:22:63.16:0,63,826	0/0:18,0:18:54.17:0,54,736	0/0:18,0:18:54.14:0,54,701	0/0:18,0:18:54.17:0,54,736	0/0:20,0:20:60.16:0,60,785	0/0:12,0:12:36.12:0,36,500	0/0:9,0:9:27.09:0,27,373	1/1:0,29:29:84.24:1241,84,0	0/0:32,0:32:96.26:0,96,1255	1/1:0,11:11:27.09:413,27,0
chr10	79918714	.	T	TCA	2772.95	PASS	AB=0.764;AC=37;AF=0.712;AN=52;BaseQRankSum=-1.927;DP=526;FS=3.669;HRun=0;HaplotypeScore=121.2785;InbreedingCoeff=-0.0468;MQ=56.08;MQ0=8;MQRankSum=-1.478;QD=6.54;ReadPosRankSum=-0.613;VQSLOD=3.2304;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:1.05:4,1,0	1/1:5,4:9:13.86:188,14,0	./.	0/0:20,0:11:3.01:0,3,31	0/1:14,10:27:60.10:247,0,60	1/1:27,0:27:5.78:49,6,0	0/0:21,0:23:35.73:0,36,351	0/1:16,6:23:12.60:198,0,13	1/1:11,8:23:6.92:260,7,0	1/1:10,7:17:17.85:266,18,0	0/1:14,9:24:12.59:252,0,13	1/1:8,0:8:3:26,3,0	1/1:8,0:8:3:26,3,0	1/1:18,0:18:2.97:26,3,0	1/1:16,0:23:9:78,9,0	0/1:9,9:17:46.09:207,0,46	0/0:19,0:21:26.91:0,27,283	0/1:10,5:15:18.77:122,0,19	0/1:14,0:13:8.13:31,0,8	0/1:20,10:30:15.73:210,0,16	0/1:14,0:16:55.76:56,0,66	1/1:21,0:20:2.99:24,3,0	1/1:16,0:14:2.99:23,3,0	./.	1/1:15,0:15:2.04:25,2,0	1/1:15,0:14:23.76:212,24,0	0/1:14,14:31:34.35:378,0,34	1/1:1,0:1:2.90:16,3,0
chr10	79918747	.	C	CACACACACACACACAT	1469.25	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=0.398;DP=483;FS=11.457;HRun=0;HaplotypeScore=197.5368;InbreedingCoeff=0.4187;MQ=65.92;MQ0=11;MQRankSum=-1.569;QD=8.80;ReadPosRankSum=-3.184;VQSLOD=1.3424;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:66.90:113,0,67	0/0:12,0:12:5.96:0,6,431	0/0:23,0:11:29.81:0,30,246	0/0:22,0:14:20.30:0,20,263	0/0:23,0:23:47.87:0,48,751	0/0:26,0:26:8.22:0,8,211	0/0:22,0:22:23.97:0,24,1376	0/0:24,0:24:47.68:0,48,520	0/0:17,0:17:30:0,30,657	0/1:22,0:22:71.45:71,0,513	0/0:16,0:16:27.33:0,27,671	1/1:2,7:11:4.26:242,4,0	1/1:0,11:13:3.98:242,4,0	1/1:0,0:10:3.01:221,3,0	0/1:15,0:15:75.91:82,0,76	0/0:16,0:15:32.90:0,33,648	0/1:24,0:24:71.42:71,0,1289	0/0:17,0:17:41.60:0,42,542	0/0:13,0:11:10.36:0,10,288	0/0:23,0:21:41.82:0,42,745	0/0:18,0:17:14.02:0,14,583	1/1:15,0:15:20.98:215,21,0	1/1:10,0:9:17.95:184,18,0	1/1:10,0:10:8.95:68,9,0	0/0:11,0:11:20.89:0,21,162	0/1:22,0:21:99:135,0,297	0/0:31,0:31:61.95:0,62,1160	0/0:1,0:1:2.88:0,3,15
chr10	79919155	.	GGAA	G	1748.45	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.238;DP=569;FS=2.077;HRun=0;HaplotypeScore=79.6587;InbreedingCoeff=0.9990;MQ=82.76;MQ0=0;MQRankSum=-6.082;QD=34.97;ReadPosRankSum=2.070;VQSLOD=3.9117;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:57.19:912,57,0	0/0:10,0:10:27.08:0,27,517	0/0:15,0:15:39.13:0,39,798	0/0:20,0:20:50.97:0,51,865	0/0:31,0:31:87.27:0,87,1779	1/1:1,26:27:60.20:958,60,0	0/0:21,0:21:60.14:0,60,1146	0/0:30,0:30:75.21:0,75,1468	0/0:18,0:18:51.17:0,51,1081	0/0:33,0:33:99:0,99,2172	0/0:19,0:19:57.17:0,57,1188	0/0:14,0:14:36.11:0,36,713	0/0:14,0:14:42.14:0,42,899	0/0:22,0:22:63.22:0,63,1387	0/0:23,0:23:66.20:0,66,1332	0/0:25,0:25:75.22:0,75,1533	0/0:23,0:23:60.17:0,60,1261	0/0:19,0:19:54.10:0,54,1059	0/0:23,0:23:63.17:0,63,1323	0/0:32,0:32:87.26:0,87,1795	0/0:12,0:12:30.10:0,30,641	0/0:14,0:14:42.14:0,42,927	0/0:17,0:17:51.16:0,51,1014	0/0:12,0:12:36.11:0,36,750	0/0:14,0:14:42.12:0,42,849	0/0:27,0:27:72.25:0,72,1566	0/0:17,0:17:42.14:0,42,926	0/0:14,0:14:42.13:0,42,884
chr10	79921442	.	C	CAGACAG	2772.19	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=5.763;DP=627;FS=11.917;HRun=0;HaplotypeScore=145.1102;InbreedingCoeff=0.6959;MQ=48.15;MQ0=42;MQRankSum=-6.448;QD=14.82;ReadPosRankSum=-3.384;VQSLOD=1.8299;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:54.53:0,55,993	0/0:12,0:12:19.39:0,19,462	0/0:16,0:7:9:0,9,105	0/0:18,0:11:21.07:0,21,352	0/0:16,0:16:24.07:0,24,512	0/0:24,0:24:36.02:0,36,707	0/0:26,0:26:46.86:0,47,864	0/0:24,0:22:12.61:0,13,469	0/0:18,0:17:23.84:0,24,537	0/1:23,0:22:15.47:15,0,619	0/0:16,0:13:21.07:0,21,354	1/1:28,0:26:34.83:823,35,0	1/1:7,13:20:4.84:86,5,0	1/1:40,0:38:8.24:522,8,0	0/0:33,0:30:57.93:0,58,915	0/0:24,0:23:43.89:0,44,887	0/0:18,0:18:20.10:0,20,608	0/1:12,0:7:1.94:2,0,217	0/0:14,0:14:32.93:0,33,488	0/0:28,0:28:41.81:0,42,925	0/0:33,0:30:34.77:0,35,689	1/1:5,0:19:3.01:35,3,0	0/0:9,0:15:2.98:0,3,21	0/0:12,0:22:0.47:0,0,1	0/0:12,0:12:17.94:0,18,288	1/1:4,23:27:58.32:1087,58,0	0/0:23,0:20:47.85:0,48,775	1/1:3,8:9:12.04:371,12,0
chr10	79921734	.	A	ATGCAGCAGCAAC	1452.19	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.609;DP=595;FS=5.296;HRun=0;HaplotypeScore=204.6609;InbreedingCoeff=0.9870;MQ=95.52;MQ0=0;MQRankSum=-6.355;QD=58.09;ReadPosRankSum=0.895;VQSLOD=3.2290;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.31:0,90,2997	0/0:6,0:6:18.06:0,18,677	0/0:35,0:35:99:0,99,3157	0/0:23,0:23:56.56:0,57,1893	0/0:24,0:24:69.17:0,69,2293	0/0:26,0:26:69.24:0,69,2451	0/0:15,0:15:45.14:0,45,1481	0/0:27,0:27:78.26:0,78,2535	0/0:28,0:28:72.22:0,72,2428	0/0:28,0:28:81.28:0,81,2931	0/0:12,0:12:30.10:0,30,1064	0/0:23,0:23:63.22:0,63,2166	0/0:24,0:24:72.25:0,72,2565	0/0:20,0:20:57.20:0,57,1986	0/0:25,0:25:69.24:0,69,2373	0/0:23,0:23:66.21:0,66,2309	0/0:19,0:19:51.17:0,51,1849	0/0:14,0:14:42.10:0,42,1400	0/0:14,0:14:39.13:0,39,1224	0/0:18,0:18:54.19:0,54,1987	0/0:23,0:23:63.20:0,63,2199	0/0:12,0:12:30.10:0,30,1090	0/0:22,0:22:63.13:0,63,2096	0/0:19,0:19:54.18:0,54,1824	1/1:14,1:25:44.99:1547,45,0	0/0:19,0:19:57.16:0,57,1995	0/0:31,0:31:84.24:0,84,2837	0/0:8,0:8:21.07:0,21,747
chr10	79926720	.	T	TGTAA	14732.68	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-11.516;DP=548;FS=1.071;HRun=0;HaplotypeScore=81.1057;InbreedingCoeff=0.9986;MQ=83.30;MQ0=0;MQRankSum=-6.224;QD=68.21;ReadPosRankSum=2.115;VQSLOD=6.7397;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:24:57.15:1498,57,0	0/0:10,0:10:30.10:0,30,582	0/0:19,0:19:51.17:0,51,917	0/0:16,0:16:45.15:0,45,858	0/0:24,0:24:62.98:0,63,1185	1/1:1,16:17:51.13:1334,51,0	0/0:6,0:6:18.06:0,18,347	0/0:33,0:33:93.32:0,93,1782	0/0:19,0:19:54.17:0,54,1010	0/0:26,0:26:72.24:0,72,1358	0/0:16,0:16:48.15:0,48,896	1/1:2,16:20:45.15:1222,45,0	1/1:0,11:11:33.11:901,33,0	1/1:2,11:18:36.08:883,36,0	0/0:21,0:21:57.16:0,57,1038	0/0:20,0:20:54.17:0,54,995	0/0:20,0:20:60.21:0,60,1159	0/0:17,0:17:48.16:0,48,919	0/0:18,0:18:54.16:0,54,980	0/0:31,0:31:93.32:0,93,1803	0/0:13,0:13:36.12:0,36,691	1/1:3,25:28:78.22:2017,78,0	1/1:3,17:22:57.11:1429,57,0	1/1:1,19:21:53.63:1475,54,0	1/1:2,17:20:54.19:1468,54,0	1/1:3,20:23:63.22:1685,63,0	0/0:23,0:23:66.23:0,66,1254	1/1:0,10:10:30.10:821,30,0
chr10	79927067	.	GTC	G	410.55	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.584;DP=631;FS=4.082;HRun=0;HaplotypeScore=73.0288;InbreedingCoeff=0.9445;MQ=80.49;MQ0=1;MQRankSum=-2.445;QD=24.15;ReadPosRankSum=0.858;VQSLOD=3.8386;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.30:0,93,1757	0/0:11,0:11:33.11:0,33,637	0/0:22,0:22:66.19:0,66,1180	0/0:26,0:26:63.19:0,63,1226	0/0:24,0:24:60.21:0,60,1121	0/0:20,0:20:54.19:0,54,1038	0/0:27,0:27:81.26:0,81,1529	0/0:31,0:31:93.32:0,93,1796	0/0:23,0:23:69.24:0,69,1332	0/0:22,0:22:63.21:0,63,1186	0/0:15,0:15:39.13:0,39,753	0/0:27,0:27:81.28:0,81,1526	0/0:19,0:19:57.20:0,57,1099	0/0:21,0:21:63.19:0,63,1169	0/0:29,0:29:87.30:0,87,1653	0/0:20,0:19:57.20:0,57,1084	0/0:29,0:29:87.30:0,87,1679	0/0:24,0:24:66.23:0,66,1260	0/0:21,0:21:60.21:0,60,1158	0/0:27,0:27:75.26:0,75,1436	0/0:35,0:35:99:0,102,1927	0/0:27,0:27:63.22:0,63,1208	0/0:20,0:20:45.14:0,45,828	0/0:25,0:25:72.25:0,72,1353	1/1:2,15:17:33.11:505,33,0	0/0:14,0:14:33.11:0,33,637	0/0:19,0:19:57.20:0,57,1101	0/0:3,0:3:9.03:0,9,174
chr10	79930399	.	CA	C	6262.96	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=18.317;DP=701;FS=7.876;HRun=6;HaplotypeScore=96.6903;InbreedingCoeff=0.9996;MQ=88.44;MQ0=0;MQRankSum=-6.737;QD=25.67;ReadPosRankSum=4.219;VQSLOD=4.6630;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,28:35:84.16:878,84,0	0/0:8,0:8:24.08:0,24,316	0/0:35,0:35:94.54:0,95,1187	0/0:21,0:21:48:0,48,570	0/0:26,0:26:69.21:0,69,894	1/1:4,18:22:42.10:446,42,0	0/0:40,0:40:99:0,111,1461	0/0:33,0:33:78.25:0,78,1011	0/0:39,0:39:99:0,117,1512	0/0:19,0:19:51.12:0,51,629	0/0:15,0:15:39.13:0,39,513	1/1:2,23:25:66.16:700,66,0	1/1:2,26:28:75.19:795,75,0	1/1:1,21:22:60.15:637,60,0	0/0:28,0:28:72.21:0,72,920	0/0:32,0:32:93.28:0,93,1194	0/0:35,0:35:99:0,102,1323	0/0:12,0:12:36.11:0,36,462	0/0:24,0:24:66.12:0,66,833	0/0:29,0:29:75.19:0,75,918	0/0:34,0:34:93.23:0,93,1162	1/1:3,15:18:39.10:413,39,0	1/1:4,14:18:45.11:476,45,0	1/1:6,23:29:66.16:700,66,0	1/1:4,15:19:41.51:444,42,0	1/1:17,0:17:42.07:434,42,0	0/0:27,0:27:81.25:0,81,1052	1/1:1,10:11:33.05:339,33,0
chr10	79930405	.	AT	A	6265.76	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=18.620;DP=694;FS=12.285;HRun=1;HaplotypeScore=97.2315;InbreedingCoeff=0.9996;MQ=88.33;MQ0=0;MQRankSum=-9.168;QD=26.11;ReadPosRankSum=5.207;VQSLOD=3.5044;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:84.17:879,84,0	0/0:8,0:8:24.08:0,24,359	0/0:35,0:35:99:0,105,1474	0/0:20,0:20:60.05:0,60,793	0/0:26,0:26:72.16:0,72,1040	1/1:21,0:21:42.11:446,42,0	0/0:42,0:42:99:0,120,1734	0/0:32,0:32:90.25:0,90,1251	0/0:42,0:42:99:0,126,1822	0/0:19,0:19:51.13:0,51,734	0/0:14,0:14:42.13:0,42,606	1/1:26,0:26:66.17:700,66,0	1/1:27,0:27:75.19:796,75,0	1/1:24,0:24:60.15:637,60,0	0/0:26,0:26:78.24:0,78,1125	0/0:32,0:32:93.26:0,93,1329	0/0:36,0:36:99:0,108,1549	0/0:14,0:14:40.63:0,41,543	0/0:23,0:23:66.03:0,66,911	0/0:25,0:25:71.96:0,72,997	0/0:34,0:34:99:0,101,1419	1/1:17,0:17:39.10:413,39,0	1/1:18,0:18:45.11:476,45,0	1/1:23,0:23:66.17:700,66,0	1/1:19,0:19:42.58:446,43,0	1/1:0,15:15:42.07:434,42,0	0/0:26,0:26:78.26:0,78,1166	1/1:17,0:17:33.05:339,33,0
chr10	79931651	.	AAC	A	423.79	PASS	AB=0.861;AC=16;AF=0.296;AN=54;BaseQRankSum=6.571;DP=519;FS=1.321;HRun=0;HaplotypeScore=92.6523;InbreedingCoeff=-0.0889;MQ=60.27;MQ0=6;MQRankSum=-1.037;QD=1.58;ReadPosRankSum=2.485;VQSLOD=1.6975;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:16:5.12:5,0,59	0/1:10,1:11:6.56:7,0,338	./.	0/0:24,0:16:3.01:0,3,45	0/0:21,0:21:36.10:0,36,523	0/1:15,0:27:6.26:86,0,6	0/0:14,0:15:30.02:0,30,388	0/1:24,2:26:34.20:34,0,358	0/0:11,0:10:18.06:0,18,274	0/1:25,1:27:22.65:23,0,563	0/1:17,1:20:5.66:6,0,506	0/0:13,0:14:2.74:0,3,12	0/0:14,0:14:10.26:0,10,99	0/0:13,0:16:6.01:0,6,63	0/1:12,6:18:67.85:68,0,332	0/0:20,0:20:33.09:0,33,481	0/1:19,3:22:22.20:22,0,519	0/0:10,0:10:21.02:0,21,268	0/1:13,2:15:30.07:30,0,290	0/1:23,2:25:28.18:28,0,460	0/1:10,2:12:21.60:22,0,108	0/0:17,0:17:8.95:0,9,85	0/0:17,0:22:8.39:0,8,79	0/0:12,0:12:5.94:0,6,42	0/0:20,0:21:2.70:0,3,26	1/1:5,0:19:39.28:188,39,0	0/1:14,3:17:3.64:4,0,354	1/1:6,0:12:11.36:56,11,0
chr10	79932382	.	TAATGATAATC	T	4070.25	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=10.342;DP=511;FS=1.247;HRun=0;HaplotypeScore=159.7456;InbreedingCoeff=0.9797;MQ=79.13;MQ0=0;MQRankSum=-9.673;QD=68.99;ReadPosRankSum=2.088;VQSLOD=3.3710;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,5:7:11.59:382,12,0	0/0:5,0:5:15.05:0,15,754	0/0:12,0:12:21.07:0,21,900	0/0:15,0:15:32.28:0,32,1228	0/0:34,0:34:84.25:0,84,3978	1/1:2,20:21:51.18:1628,51,0	0/0:18,0:18:48.13:0,48,1921	0/0:41,0:41:99:0,114,5688	0/0:18,0:18:45.15:0,45,2001	0/0:26,0:26:78.24:0,78,3513	0/0:21,0:21:60.21:0,60,3093	0/0:20,0:20:54.19:0,54,2722	0/0:27,0:27:75.26:0,75,3822	0/0:12,0:12:33.11:0,33,1712	0/0:24,0:24:72.23:0,72,3501	0/0:12,0:12:33.10:0,33,1581	0/0:19,0:19:51.18:0,51,2624	0/0:17,0:17:45.15:0,45,2217	0/0:23,0:23:69.23:0,69,3276	0/0:28,0:28:81.25:0,81,3821	0/0:13,0:13:36.12:0,36,1827	0/0:15,0:15:36.11:0,36,1741	0/0:20,0:20:45.14:0,45,2192	0/0:10,0:10:27.09:0,27,1403	1/1:2,6:8:15.05:479,15,0	1/1:4,18:21:51.18:1581,51,0	0/0:21,0:21:51.12:0,51,2315	./.
chr10	79932889	.	GA	G	5325.58	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=13.879;DP=504;FS=0.352;HRun=7;HaplotypeScore=49.2985;InbreedingCoeff=0.9833;MQ=66.25;MQ0=1;MQRankSum=0.306;QD=28.63;ReadPosRankSum=2.038;VQSLOD=5.3537;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:63.14:643,63,0	0/0:9,0:9:24.08:0,24,301	0/0:13,0:12:6.45:0,6,339	0/0:5,0:6:17.89:0,18,202	0/0:35,0:35:99:0,99,1233	1/1:1,13:14:39.09:398,39,0	0/0:14,0:14:39.12:0,39,480	0/0:34,0:34:96.30:0,96,1198	0/0:12,0:12:32.96:0,33,381	0/0:24,0:24:69.17:0,69,839	0/0:17,0:17:51.16:0,51,642	1/1:1,7:8:18.04:184,18,0	1/1:2,20:22:60.14:612,60,0	1/1:2,15:17:45.10:459,45,0	0/0:20,0:20:57.17:0,57,704	0/0:22,0:22:60.18:0,60,743	0/0:20,0:20:45.14:0,45,566	0/0:16,0:16:44.41:0,44,564	0/0:16,0:16:45.12:0,45,540	0/0:27,0:27:75.23:0,75,931	0/0:11,0:11:30.10:0,30,377	1/1:2,18:20:54.12:551,54,0	1/1:1,20:21:60.14:612,60,0	1/1:0,19:19:57.13:582,57,0	1/1:0,18:18:51.12:520,51,0	1/1:0,16:16:48.11:490,48,0	0/0:22,0:21:60.19:0,60,754	1/1:0,9:9:27.06:275,27,0
chr10	79933424	.	A	ATTTTT	7528.43	PASS	AB=0.667;AC=21;AF=0.375;AN=56;BaseQRankSum=7.975;DP=516;FS=1.224;HRun=9;HaplotypeScore=122.5692;InbreedingCoeff=0.9037;MQ=62.41;MQ0=2;MQRankSum=-12.240;QD=38.41;ReadPosRankSum=-4.857;VQSLOD=2.0674;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:28:50.87:548,51,0	0/0:10,0:11:30.05:0,30,449	0/0:12,0:11:14.63:0,15,314	0/0:11,0:11:21.03:0,21,332	0/0:26,0:27:78.26:0,78,1263	1/1:8,0:24:59.46:649,59,0	0/0:23,0:24:62.55:0,63,950	0/0:28,0:28:63.06:0,63,1040	0/0:13,0:13:26.82:0,27,439	0/0:24,0:25:69.19:0,69,1099	0/0:24,0:24:66.17:0,66,1038	1/1:7,0:11:33.10:752,33,0	1/1:13,3:16:41.51:909,42,0	1/1:7,11:22:57.20:1383,57,0	0/0:22,0:23:57.10:0,57,924	0/0:15,0:15:36.07:0,36,592	0/0:19,0:19:51.15:0,51,841	0/0:17,0:17:42.07:0,42,665	0/0:16,0:16:42.06:0,42,666	0/0:21,0:21:54.14:0,54,880	0/0:12,0:12:26.39:0,26,441	1/1:7,3:10:20.28:440,20,0	1/1:10,9:21:52.98:1183,53,0	1/1:12,3:15:24.08:551,24,0	0/1:12,0:24:32.14:32,0,86	1/1:12,5:17:42.14:912,42,0	0/0:22,0:22:57.13:0,57,944	1/1:2,1:3:6.02:170,6,0
chr10	79933437	.	TC	T	683.42	PASS	AB=0.933;AC=15;AF=0.268;AN=56;BaseQRankSum=14.241;DP=499;FS=1.890;HRun=1;HaplotypeScore=89.1615;InbreedingCoeff=0.3393;MQ=55.92;MQ0=7;MQRankSum=-9.364;QD=3.52;ReadPosRankSum=-0.456;VQSLOD=-0.0644;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,2:33:49.23:128,0,49	0/0:10,0:10:30.07:0,30,373	0/0:8,0:7:18.93:0,19,227	0/0:9,0:9:16.95:0,17,210	0/0:26,0:26:78.16:0,78,1000	0/1:20,1:21:7.91:107,0,8	0/0:24,0:23:60.12:0,60,763	0/0:27,0:26:75.20:0,75,923	0/0:10,0:10:26.42:0,26,349	0/0:24,0:24:70.03:0,70,842	0/0:27,0:27:66.55:0,67,896	1/1:10,1:11:21.62:85,22,0	1/1:17,3:19:37.90:186,38,0	0/1:23,3:25:48.66:72,0,49	0/0:21,0:21:63.17:0,63,811	0/0:12,0:12:35.98:0,36,427	0/0:19,0:19:54.13:0,54,683	0/0:16,1:17:19.82:0,20,533	0/0:16,0:14:42.08:0,42,484	0/0:20,0:20:60.13:0,60,757	0/0:10,0:10:26.71:0,27,313	1/1:8,1:7:11.74:67,12,0	0/1:16,3:19:57.12:66,0,57	0/1:12,2:14:17.69:44,0,18	0/1:22,0:22:48.01:48,0,65	0/1:16,0:15:30.80:41,0,31	0/0:25,0:25:75.17:0,75,934	1/1:3,0:3:4.69:16,5,0
chr10	79933438	.	CT	C	2748.35	PASS	AB=0.674;AC=20;AF=0.357;AN=56;BaseQRankSum=13.382;DP=497;FS=12.666;HRun=9;HaplotypeScore=82.2278;InbreedingCoeff=0.8341;MQ=52.43;MQ0=7;MQRankSum=-7.547;QD=14.09;ReadPosRankSum=-1.877;VQSLOD=1.9372;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,23:33:59.90:537,60,0	0/0:10,0:10:24.06:0,24,268	0/0:6,1:6:11.71:0,12,115	0/0:7,0:7:8.94:0,9,83	0/0:25,0:26:72.05:0,72,811	1/1:3,18:21:48.01:438,48,0	0/0:25,0:24:57.09:0,57,627	0/0:26,0:25:54.15:0,54,609	0/0:10,0:10:27.07:0,27,302	0/0:23,1:24:29.68:0,30,572	0/0:25,1:27:38.55:0,39,671	1/1:3,8:11:15.33:160,15,0	1/1:6,14:19:41.86:375,42,0	1/1:14,12:25:25.04:238,25,0	0/0:21,0:21:57.15:0,57,639	0/0:12,0:12:27.08:0,27,312	0/0:19,0:19:45.13:0,45,519	0/0:15,0:17:30.03:0,30,433	0/0:17,0:15:27.05:0,27,298	0/0:19,0:19:51.15:0,51,588	0/0:10,0:10:24.07:0,24,275	0/1:5,5:8:6.99:109,0,7	1/1:8,11:19:29.94:273,30,0	1/1:6,9:15:10.31:150,10,0	1/1:11,11:22:51.02:465,51,0	0/1:8,7:14:6.03:159,0,6	0/0:25,0:25:63.19:0,63,727	1/1:1,2:3:6:55,6,0
chr10	79935128	.	GAAGCTCAA	G	6312.03	PASS	AB=0.544;AC=7;AF=0.130;AN=54;BaseQRankSum=13.370;DP=574;FS=1.461;HRun=0;HaplotypeScore=148.0787;InbreedingCoeff=0.8336;MQ=90.99;MQ0=0;MQRankSum=-13.632;QD=54.89;ReadPosRankSum=1.853;VQSLOD=4.5054;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,13:21:21.07:576,21,0	0/0:8,0:8:24.08:0,24,990	0/0:26,0:26:56.79:0,57,2290	0/0:24,0:24:66.03:0,66,2509	0/0:25,0:25:75.23:0,75,3020	1/1:1,32:33:78.27:2082,78,0	0/0:15,0:15:39.13:0,39,1688	0/0:26,0:26:63.22:0,63,2644	0/0:26,0:26:78.27:0,78,3217	0/0:28,0:28:81.28:0,81,3429	0/0:14,0:14:30.10:0,30,1270	0/0:21,0:21:60.21:0,60,2532	0/0:22,0:22:57.20:0,57,2401	0/0:17,0:17:51.18:0,51,2104	0/0:14,0:14:39.13:0,39,1694	0/0:20,0:20:57.20:0,57,2354	0/0:18,0:18:54.19:0,54,2269	0/0:14,0:14:39.13:0,39,1602	0/0:16,0:16:39.13:0,39,1597	0/0:35,0:35:99:0,102,4275	0/0:18,0:18:45.15:0,45,1958	0/0:15,0:15:42.14:0,42,1754	0/0:19,0:19:54.19:0,54,2198	0/0:15,0:15:45.15:0,45,1887	1/1:4,26:30:69.24:1868,69,0	0/1:5,26:31:58.38:1785,0,58	0/0:22,0:22:63.20:0,63,2360	./.
chr10	79936445	.	AAAAG	A	980.95	PASS	AB=0.971;AC=12;AF=0.214;AN=56;BaseQRankSum=11.812;DP=521;FS=0.903;HRun=0;HaplotypeScore=102.3330;InbreedingCoeff=0.0428;MQ=70.89;MQ0=7;MQRankSum=-7.627;QD=5.54;ReadPosRankSum=5.866;VQSLOD=1.3183;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:30.79:66,0,31	0/0:13,0:13:34.81:0,35,475	0/0:35,0:11:16.22:0,16,175	0/0:31,0:18:6.35:0,6,116	0/0:29,0:28:76.27:0,76,868	0/1:14,0:14:25.10:101,0,25	0/0:13,0:13:35.35:0,35,515	0/0:28,0:28:67.34:0,67,677	0/0:12,0:12:33.05:0,33,444	0/0:13,0:12:30.02:0,30,433	0/0:23,0:23:45.62:0,46,674	0/1:9,0:9:38.67:68,0,39	0/1:8,3:11:45.74:144,0,46	0/1:12,1:13:0.42:88,0,0	0/0:20,0:20:50.99:0,51,743	0/0:14,0:14:41.88:0,42,485	0/0:15,0:15:42.04:0,42,607	0/0:13,0:13:24.81:0,25,443	0/0:18,0:18:28.33:0,28,468	0/0:20,0:20:46.38:0,46,572	0/0:13,0:13:31.25:0,31,433	0/1:14,0:13:45.08:45,0,137	0/1:23,0:23:28.08:168,0,28	1/1:15,0:15:25.01:162,25,0	0/1:24,0:24:5.56:108,0,6	0/1:28,0:28:59.06:170,0,59	0/0:33,0:32:94.92:0,95,1256	0/1:9,0:9:16.14:16,0,75
chr10	79936449	.	GAAAA	G	2343.21	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=7.868;DP=532;FS=4.133;HRun=17;HaplotypeScore=101.6888;InbreedingCoeff=0.8787;MQ=67.49;MQ0=8;MQRankSum=-5.545;QD=13.24;ReadPosRankSum=7.940;VQSLOD=0.2665;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:17:6.85:145,7,0	0/0:10,0:12:30.07:0,30,493	0/0:41,0:12:11.44:0,11,162	0/0:29,0:16:4.66:0,5,82	0/0:29,0:29:47.36:0,47,786	1/1:5,0:16:5.97:205,6,0	0/0:13,0:14:29.27:0,29,525	0/0:28,0:30:51.21:0,51,726	0/0:9,0:12:23.97:0,24,407	0/0:16,0:17:40.96:0,41,569	0/0:20,0:20:42.08:0,42,748	1/1:4,4:8:11.62:151,12,0	1/1:6,4:11:14.99:221,15,0	1/1:3,10:13:11.85:185,12,0	0/0:16,0:19:42.10:0,42,763	0/0:12,0:15:33.02:0,33,541	0/0:14,0:14:36.08:0,36,685	0/0:13,0:14:33.83:0,34,562	0/0:17,0:18:34.66:0,35,554	0/0:17,0:18:44.17:0,44,719	0/0:12,0:14:33.56:0,34,527	1/1:8,6:14:12.13:171,12,0	1/1:6,17:23:16.77:395,17,0	1/1:1,9:13:31.21:332,31,0	1/1:5,16:25:2.90:283,3,0	1/1:6,0:24:38.11:397,38,0	0/0:32,0:33:75.22:0,75,1344	1/1:6,0:12:3.35:65,3,0
chr10	79937049	.	A	ACTTT	12714.92	PASS	AB=0.825;AC=23;AF=0.411;AN=56;BaseQRankSum=-8.730;DP=588;FS=5.298;HRun=0;HaplotypeScore=96.1461;InbreedingCoeff=0.8052;MQ=72.57;MQ0=0;MQRankSum=-4.908;QD=50.46;ReadPosRankSum=0.613;VQSLOD=5.4376;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:22:54.18:1289,54,0	0/0:9,0:9:27.08:0,27,448	0/0:31,0:29:48.56:0,49,730	0/1:15,0:14:6.70:7,0,321	0/0:21,0:21:60.20:0,60,1040	1/1:5,22:26:66.23:1647,66,0	0/0:20,0:20:57.19:0,57,997	0/0:26,0:26:57.18:0,57,929	0/0:25,0:25:63.22:0,63,1105	0/0:25,0:25:69.24:0,69,1228	0/1:16,1:17:29.26:29,0,726	1/1:2,18:22:48.16:1239,48,0	1/1:4,20:27:60.21:1511,60,0	1/1:6,20:27:60.21:1543,60,0	0/0:24,0:24:63.22:0,63,1118	0/0:27,0:27:69.24:0,69,1228	0/0:29,0:29:78.27:0,78,1374	0/0:6,0:6:15.05:0,15,252	0/0:15,0:15:33.11:0,33,584	0/0:24,0:24:69.24:0,69,1225	0/0:25,0:25:72.22:0,72,1251	1/1:5,13:19:49.41:1145,49,0	1/1:3,12:16:39.13:1000,39,0	1/1:5,14:21:39.13:969,39,0	1/1:3,10:13:33.11:813,33,0	0/1:2,15:17:5.28:1058,0,5	0/0:29,0:29:69.22:0,69,1166	1/1:3,6:9:18.06:465,18,0
chr10	79937490	.	AT	A	2048.25	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.264;DP=491;FS=2.078;HRun=9;HaplotypeScore=71.4672;InbreedingCoeff=0.9940;MQ=76.46;MQ0=0;MQRankSum=-1.273;QD=21.34;ReadPosRankSum=2.369;VQSLOD=4.5990;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:20:48.02:439,48,0	0/0:6,0:6:18.05:0,18,208	0/0:13,0:13:27.06:0,27,296	0/0:11,0:11:30.08:0,30,337	0/0:29,0:29:84.25:0,84,964	1/1:1,25:26:72.04:659,72,0	0/0:14,0:14:36.09:0,36,406	0/0:29,0:30:90.23:0,90,1005	0/0:14,0:14:39.12:0,39,450	0/0:23,0:23:66.20:0,66,762	0/0:22,0:22:60.18:0,60,691	0/0:2,0:11:25.57:0,26,129	0/0:2,0:23:42.58:0,43,223	0/0:2,0:19:42.61:0,43,217	0/0:10,0:10:30.08:0,30,337	0/0:16,0:16:42.11:0,42,476	0/0:10,0:10:27.08:0,27,312	0/0:6,0:6:18.05:0,18,208	0/0:18,0:18:45.12:0,45,511	0/0:31,0:31:93.28:0,93,1073	0/0:9,0:9:24.07:0,24,277	0/0:4,0:12:28.79:0,29,160	0/0:4,0:21:54.13:0,54,283	0/0:2,0:18:39.93:0,40,213	1/1:3,22:25:57.03:522,57,0	1/1:2,14:16:42.02:384,42,0	0/0:29,0:29:81.24:0,81,935	1/1:1,8:9:24.01:220,24,0
chr10	79938099	.	A	AT	717.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.058;DP=532;FS=0.845;HRun=4;HaplotypeScore=51.1795;InbreedingCoeff=0.8832;MQ=78.84;MQ0=0;MQRankSum=-3.759;QD=28.69;ReadPosRankSum=0.393;VQSLOD=2.9309;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:27.06:0,27,294	0/0:5,0:5:15.03:0,15,160	0/0:11,0:11:30.05:0,30,312	0/0:14,0:14:32.66:0,33,308	0/0:28,0:28:81.20:0,81,895	0/0:15,0:15:45.11:0,45,500	0/0:14,0:14:36.09:0,36,397	0/0:33,0:33:90.23:0,90,996	0/0:12,0:12:33.09:0,33,374	0/0:28,0:28:81.19:0,81,887	0/0:29,0:29:78.21:0,78,873	0/0:13,0:13:39.11:0,39,442	0/0:23,0:23:69.20:0,69,781	0/0:18,0:18:51.13:0,51,568	0/0:16,0:16:48.13:0,48,536	0/0:23,0:23:66.17:0,66,738	0/0:20,0:20:60.14:0,60,658	0/0:10,0:10:30.09:0,30,339	0/0:24,0:24:69.17:0,69,754	0/0:35,0:35:99:0,99,1120	0/0:2,0:2:6.02:0,6,68	0/0:24,0:24:63.17:0,63,702	0/0:35,0:35:96.27:0,96,1086	0/0:10,0:10:30.09:0,30,339	1/1:0,25:25:60.20:812,60,0	0/0:16,0:16:48.14:0,48,543	0/0:33,0:33:99:0,99,1110	0/0:7,0:7:18.03:0,18,194
chr10	79938595	.	TAC	T	2480.88	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.349;DP=533;FS=16.296;HRun=0;HaplotypeScore=99.9768;InbreedingCoeff=0.9718;MQ=63.31;MQ0=2;MQRankSum=-2.736;QD=27.88;ReadPosRankSum=0.174;VQSLOD=4.1892;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.26:0,75,1283	0/0:13,0:13:36.12:0,36,600	0/0:8,0:6:6.02:0,6,91	0/0:12,0:8:17.61:0,18,257	0/0:28,0:28:81.25:0,81,1346	0/0:28,0:28:78.25:0,78,1291	0/0:11,0:11:21.07:0,21,353	0/0:31,0:31:66.20:0,66,1067	0/0:20,0:20:42.14:0,42,727	0/0:20,0:20:54.16:0,54,880	0/0:24,0:24:63.19:0,63,1060	1/1:0,13:13:36.05:457,36,0	1/1:3,12:15:30.10:399,30,0	1/1:0,12:12:30.10:398,30,0	0/0:24,1:25:20.27:0,20,947	0/0:16,0:16:33.11:0,33,571	0/0:25,0:25:66.20:0,66,1084	0/0:6,0:6:18.06:0,18,305	0/0:25,0:25:66.21:0,66,1088	0/0:23,0:23:57.17:0,57,932	0/0:21,0:21:57.19:0,57,966	1/1:0,14:14:33.02:416,33,0	1/1:1,19:20:42.14:559,42,0	1/1:2,13:15:33.11:439,33,0	0/0:22,0:21:18.06:0,18,311	0/0:18,0:18:45.04:0,45,460	0/0:28,0:28:71.90:0,72,1173	0/0:12,0:12:30.06:0,30,342
chr10	79938629	.	T	TTG	1418.32	PASS	AB=0.854;AC=20;AF=0.385;AN=52;BaseQRankSum=-6.610;DP=548;FS=1.586;HRun=0;HaplotypeScore=128.2672;InbreedingCoeff=0.2157;MQ=53.04;MQ0=20;MQRankSum=4.254;QD=4.78;ReadPosRankSum=-2.857;VQSLOD=1.9341;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:15.43:0,15,71	0/1:11,1:11:25.76:38,0,26	./.	./.	0/0:23,0:23:3.42:0,3,94	0/0:25,0:25:15.36:0,15,88	1/1:12,2:14:10.71:124,11,0	0/1:33,0:32:9.25:13,0,9	0/1:10,10:20:11.60:61,0,12	0/1:19,0:19:17.93:66,0,18	1/1:16,9:25:15.04:194,15,0	0/0:15,0:15:6.57:0,7,30	0/0:18,0:18:19.89:0,20,98	0/0:18,0:17:6.15:0,6,29	0/1:14,5:19:46.79:66,0,47	1/1:9,6:15:2.28:64,2,0	0/1:13,13:26:10.90:232,0,11	0/1:10,0:8:7.25:27,0,7	0/1:20,8:28:17.24:169,0,17	1/1:16,4:21:15.05:200,15,0	1/1:26,0:24:14.75:159,15,0	0/0:9,0:9:5.68:0,6,28	0/0:20,0:19:11.83:0,12,57	0/0:13,0:13:2.60:0,3,10	0/0:22,0:19:14.16:0,14,69	0/0:18,0:16:11.36:0,11,56	1/1:19,8:27:11.72:174,12,0	0/0:11,0:11:2.84:0,3,14
chr10	79938632	.	TGTGTGTGTGTG	T	1825.71	PASS	AB=0.834;AC=9;AF=0.161;AN=56;BaseQRankSum=9.005;DP=549;FS=0.000;HRun=0;HaplotypeScore=194.7056;InbreedingCoeff=-0.1954;MQ=51.45;MQ0=22;MQRankSum=-7.504;QD=12.68;ReadPosRankSum=2.856;VQSLOD=2.2156;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:26.60:0,27,806	0/0:12,0:11:33.08:0,33,709	0/0:16,0:3:9.03:0,9,113	0/0:19,0:2:6.02:0,6,76	0/0:23,0:23:60.20:0,60,1666	0/0:23,0:27:70.61:0,71,1084	0/0:14,0:14:39.13:0,39,1391	0/0:33,0:32:93.31:0,93,1915	0/0:19,0:19:30.10:0,30,921	0/0:21,0:21:62.87:0,63,1490	0/0:24,0:24:45.75:0,46,1277	0/1:13,3:15:91.95:211,0,92	0/1:11,7:18:72.94:531,0,73	0/1:15,3:17:73.11:209,0,73	0/0:18,0:18:35.95:0,36,973	0/0:16,0:16:29.78:0,30,923	0/0:25,0:25:49.71:0,50,1536	0/0:11,0:9:24.04:0,24,666	0/0:32,0:30:87.73:0,88,2829	0/0:19,0:19:48.16:0,48,1336	0/0:27,0:25:65.81:0,66,1826	0/1:6,3:9:33.59:206,0,34	0/1:12,7:18:96.78:440,0,97	0/1:12,2:13:18.47:80,0,18	0/1:22,0:19:14.22:14,0,144	0/1:14,0:16:99:235,0,133	0/0:28,0:27:65.43:0,65,1442	0/1:9,0:10:39.81:40,0,129
chr10	79939015	.	T	TA	1103.25	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.317;DP=557;FS=0.644;HRun=8;HaplotypeScore=56.5412;InbreedingCoeff=0.8958;MQ=78.05;MQ0=0;MQRankSum=-0.481;QD=26.91;ReadPosRankSum=0.066;VQSLOD=4.1471;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75:0,75,673	0/0:6,0:6:18.01:0,18,165	0/0:17,0:17:29.71:0,30,248	0/0:14,0:14:7.25:0,7,204	0/0:40,0:39:99:0,105,945	0/0:25,0:25:63:0,63,568	0/0:16,0:17:50.05:0,50,442	0/0:40,0:40:99:0,108,983	0/0:10,0:10:30.02:0,30,275	0/0:35,0:35:87:0,87,787	0/0:27,0:27:71.93:0,72,638	0/0:18,0:18:51.03:0,51,467	0/0:18,0:18:53.95:0,54,477	0/0:18,0:18:51.02:0,51,467	0/0:18,0:18:51.03:0,51,466	0/0:10,0:10:30.01:0,30,272	0/0:23,0:23:56.97:0,57,507	0/0:7,0:7:20.97:0,21,184	0/0:24,0:24:72.02:0,72,650	0/0:24,0:24:60.03:0,60,549	0/0:3,0:3:5.99:0,6,52	0/0:13,0:13:36.02:0,36,329	0/0:20,0:20:51.01:0,51,463	0/0:11,0:11:27:0,27,243	0/0:17,0:17:51.03:0,51,466	1/1:5,30:35:93.24:1048,93,0	0/0:33,0:33:90.01:0,90,815	1/1:0,6:6:15.04:173,15,0
chr10	79940347	.	G	GTATGTGTGCGTGTGTGTGTGTGTA	6876.14	PASS	AB=0.986;AC=12;AF=0.214;AN=56;BaseQRankSum=10.274;DP=805;FS=1.656;HRun=0;HaplotypeScore=465.2338;InbreedingCoeff=0.2896;MQ=56.84;MQ0=8;MQRankSum=-7.228;QD=24.91;ReadPosRankSum=1.222;VQSLOD=1.8284;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:43:99:101,0,3719	0/0:16,0:16:48.06:0,48,1465	0/0:49,0:25:46.52:0,47,1014	0/0:48,0:31:45.59:0,46,999	0/0:25,0:25:69.20:0,69,3153	0/0:24,0:24:56.78:0,57,2611	0/0:21,0:21:63.10:0,63,2224	0/0:33,0:33:93.18:0,93,2554	0/0:30,0:30:90.21:0,90,3830	0/0:35,0:34:99:0,99,4484	0/0:18,0:18:54.18:0,54,2894	0/1:35,0:36:33.39:1359,0,33	0/1:33,0:33:49.98:1268,0,50	0/1:32,0:34:51.46:1139,0,51	0/0:44,0:44:99:0,126,6857	0/0:30,0:30:90.25:0,90,4147	0/0:19,0:19:51.14:0,51,1771	0/0:20,0:20:5.42:0,5,1932	0/0:16,0:15:39.07:0,39,1341	0/0:27,0:27:78.11:0,78,3351	0/0:31,0:31:87.22:0,87,3979	0/1:29,0:29:99:374,0,158	0/1:29,0:29:99:174,0,230	0/0:15,0:15:4.61:0,5,25	1/1:2,2:40:9.03:705,9,0	1/1:20,0:26:35.27:1675,35,0	0/0:28,0:28:84.22:0,84,4164	1/1:5,0:5:6.47:82,6,0
chr10	79940355	.	GTA	G	189.54	PASS	AB=0.807;AC=9;AF=0.161;AN=56;BaseQRankSum=6.091;DP=769;FS=6.657;HRun=0;HaplotypeScore=174.9406;InbreedingCoeff=0.1231;MQ=57.95;MQ0=8;MQRankSum=-0.883;QD=1.06;ReadPosRankSum=-3.861;VQSLOD=1.2672;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:69.65:0,70,1313	0/0:14,0:14:39.13:0,39,752	0/0:43,0:20:52.72:0,53,896	0/0:45,0:28:48.78:0,49,1082	0/0:27,0:27:78.20:0,78,1360	0/0:24,0:24:54.18:0,54,982	0/0:23,0:23:69.20:0,69,1248	0/0:30,0:30:87.26:0,87,1539	0/0:29,0:29:83.77:0,84,1533	0/0:36,0:35:99:0,105,1983	0/0:18,0:18:54.18:0,54,980	0/1:26,11:37:21.03:21,0,49	0/1:25,8:33:65.51:66,0,209	0/1:28,6:34:30.72:53,0,31	0/0:44,0:44:99:0,132,2512	0/0:30,0:30:90.20:0,90,1662	0/0:19,0:19:44.99:0,45,840	0/0:19,0:19:48.05:0,48,864	0/0:16,0:15:42.14:0,42,804	0/0:27,0:27:78.25:0,78,1412	0/0:30,0:30:84.29:0,84,1596	0/1:19,10:29:46.46:89,0,46	0/1:22,4:26:63.72:64,0,181	1/1:10,4:14:2.08:22,2,0	0/0:24,0:24:4.17:0,4,32	0/0:23,0:22:35.05:0,35,922	0/0:30,0:30:90.29:0,90,1674	1/1:5,0:5:0.47:1,0,0
chr10	79940356	.	TATGA	T	285.28	PASS	AB=0.962;AC=9;AF=0.161;AN=56;BaseQRankSum=5.863;DP=756;FS=4.738;HRun=0;HaplotypeScore=192.7009;InbreedingCoeff=0.1842;MQ=58.26;MQ0=8;MQRankSum=-1.011;QD=1.70;ReadPosRankSum=-4.512;VQSLOD=1.3267;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:69.51:0,70,1937	0/0:13,0:13:39.13:0,39,1112	0/0:41,0:20:56.77:0,57,1318	0/0:45,0:28:68.66:0,69,1651	0/0:27,0:27:78.25:0,78,2027	0/0:24,0:24:54.19:0,54,1484	0/0:23,0:23:69.24:0,69,1906	0/0:29,0:29:87.30:0,87,2314	0/0:30,0:30:87.28:0,87,2355	0/0:36,0:35:99:0,105,2923	0/0:19,0:19:57.20:0,57,1561	0/1:33,2:35:17.99:18,0,90	0/1:29,1:30:83.32:83,0,320	0/1:30,1:31:56.63:73,0,57	0/0:44,0:44:99:0,132,3794	0/0:30,0:30:90.31:0,90,2471	0/0:18,0:18:44.99:0,45,1233	0/0:19,0:19:31.15:0,31,1230	0/0:16,0:15:42.14:0,42,1197	0/0:27,0:27:78.27:0,78,2124	0/0:30,0:30:84.29:0,84,2355	0/1:27,1:28:75.48:110,0,75	0/1:24,1:25:88.66:89,0,307	1/1:14,0:14:2.86:24,3,0	0/0:24,0:24:4.70:0,5,38	0/0:23,0:22:35.05:0,35,1383	0/0:30,0:30:90.30:0,90,2525	1/1:5,0:5:2.99:23,3,0
chr10	79940417	.	GACACAC	G	5190.09	PASS	AB=0.858;AC=15;AF=0.268;AN=56;BaseQRankSum=12.783;DP=720;FS=0.418;HRun=0;HaplotypeScore=215.5032;InbreedingCoeff=0.7199;MQ=61.41;MQ0=3;MQRankSum=-13.707;QD=27.17;ReadPosRankSum=-1.404;VQSLOD=4.2608;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:39:54.17:0,54,720	0/0:12,0:12:36.12:0,36,1065	0/0:22,0:10:15.91:0,16,137	0/0:38,0:28:25.75:0,26,368	0/0:25,0:25:75.26:0,75,2426	0/0:5,0:33:60.09:0,60,770	0/0:25,0:25:63.22:0,63,1982	0/0:41,0:41:87.26:0,87,2488	0/0:31,0:32:90.29:0,90,2723	0/0:31,0:31:75.26:0,75,2531	0/0:16,0:16:36.12:0,36,1193	1/1:6,19:26:50.90:1075,51,0	1/1:4,19:26:60.16:1131,60,0	1/1:7,10:20:32.79:704,33,0	0/0:29,0:30:78.27:0,78,2380	0/0:28,0:28:72.25:0,72,2266	0/0:20,0:20:42.14:0,42,1390	0/0:12,0:12:21.07:0,21,645	0/0:23,0:21:51.17:0,51,1599	0/0:26,0:26:66.23:0,66,2057	0/0:47,0:47:99:0,123,3966	1/1:5,22:31:45.15:922,45,0	1/1:6,13:21:33.11:666,33,0	1/1:3,7:11:12.51:258,13,0	0/1:14,0:26:19.94:23,0,20	0/1:21,3:24:99:370,0,103	0/0:27,0:27:72.25:0,72,2146	0/1:6,0:6:33.50:41,0,33
chr10	79940431	.	CAG	C	436.59	PASS	AB=0.962;AC=8;AF=0.143;AN=56;BaseQRankSum=6.748;DP=718;FS=6.432;HRun=0;HaplotypeScore=180.7845;InbreedingCoeff=0.5931;MQ=60.66;MQ0=2;MQRankSum=3.611;QD=3.23;ReadPosRankSum=4.258;VQSLOD=2.0006;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:6.72:174,7,0	0/1:11,1:12:13.71:14,0,269	0/0:24,0:10:12.83:0,13,88	0/1:34,0:26:5.66:6,0,110	0/0:28,0:28:48.36:0,48,1023	1/1:32,0:31:15.09:250,15,0	0/0:24,0:24:63.17:0,63,957	0/0:38,0:38:75.97:0,76,850	0/0:34,1:35:5.69:0,6,1123	0/0:34,0:33:66.85:0,67,1197	0/0:13,0:13:33.08:0,33,496	0/0:27,0:27:26.46:0,26,96	0/0:26,0:26:34.17:0,34,149	0/0:16,0:16:19.45:0,19,89	0/0:30,1:31:35.75:0,36,1102	0/0:31,1:32:40.31:0,40,1024	0/0:16,0:16:45.11:0,45,693	0/0:9,0:9:14.95:0,15,178	0/0:26,0:24:60.17:0,60,875	0/0:26,1:27:9.66:0,10,822	0/0:53,0:53:49.63:0,50,1721	0/0:32,0:32:35.31:0,35,189	0/0:17,0:17:26.17:0,26,131	0/0:13,0:13:11.74:0,12,68	1/1:25,0:25:4.05:126,4,0	0/0:26,0:26:52.35:0,52,374	0/0:27,0:27:40.30:0,40,824	0/0:9,0:9:20.72:0,21,136
chr10	79940472	.	AGT	A	497.41	PASS	AB=0.942;AC=4;AF=0.071;AN=56;BaseQRankSum=5.297;DP=799;FS=3.097;HRun=0;HaplotypeScore=159.5049;InbreedingCoeff=0.4308;MQ=54.11;MQ0=12;MQRankSum=0.689;QD=4.61;ReadPosRankSum=-0.314;VQSLOD=3.0495;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,1:44:60.35:0,60,1411	0/0:8,0:8:18.06:0,18,283	0/0:30,0:10:20.91:0,21,232	0/0:30,0:13:19.93:0,20,173	0/0:21,2:23:19.54:0,20,713	0/0:29,0:29:54.14:0,54,810	0/0:29,0:29:63.21:0,63,992	0/0:36,0:36:59.89:0,60,834	0/0:30,1:31:36.28:0,36,1054	0/0:33,0:33:69.09:0,69,1025	0/0:16,1:17:3.16:0,3,540	0/0:37,0:37:63.47:0,63,1205	0/0:34,1:35:42.30:0,42,1142	0/0:21,1:22:12.22:0,12,663	0/0:43,1:44:62.87:0,63,1797	0/0:36,0:36:60.34:0,60,1412	0/0:29,1:30:30.26:0,30,960	0/0:9,0:9:19.31:0,19,281	0/0:24,0:22:33.11:0,33,522	0/1:27,1:28:2.53:3,0,927	0/1:51,5:56:33.20:33,0,1373	0/0:36,2:38:48.14:0,48,1232	0/0:26,0:26:60.19:0,60,918	0/0:24,0:24:44.99:0,45,718	1/1:8,16:24:50.82:569,51,0	0/0:17,0:25:50.98:0,51,503	0/0:22,0:22:15.23:0,15,692	0/0:4,0:8:9:0,9,79
chr10	79940931	.	TAG	T	770.69	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.621;DP=514;FS=2.849;HRun=0;HaplotypeScore=61.9821;InbreedingCoeff=0.8936;MQ=69.70;MQ0=1;MQRankSum=-6.184;QD=32.11;ReadPosRankSum=-0.271;VQSLOD=5.2955;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:36.12:0,36,653	0/0:7,0:7:21.07:0,21,385	0/0:6,0:6:18.06:0,18,296	0/0:10,0:9:20.10:0,20,319	0/0:19,0:19:57.18:0,57,1009	0/0:24,0:24:72.25:0,72,1305	0/0:12,0:12:36.12:0,36,654	0/0:39,0:39:93.31:0,93,1660	0/0:20,0:20:57.20:0,57,1037	0/0:26,0:26:78.26:0,78,1401	0/0:28,0:28:75.24:0,75,1330	0/0:19,0:19:54.17:0,54,945	0/0:15,0:15:42.14:0,42,763	0/0:18,0:18:54.19:0,54,990	0/0:13,0:13:39.13:0,39,709	0/0:17,0:17:48.16:0,48,873	0/0:22,0:22:57.17:0,57,979	0/0:22,0:22:66.19:0,66,1141	0/0:19,0:19:45.10:0,45,762	0/0:21,0:21:60.19:0,60,1070	0/0:27,0:27:78.25:0,78,1394	0/0:8,0:8:24.08:0,24,440	0/0:22,0:22:60.21:0,60,1092	0/0:15,0:15:45.11:0,45,790	0/0:24,0:24:63.19:0,63,1090	1/1:3,19:22:8.23:787,8,0	0/0:22,0:22:66.23:0,66,1210	1/1:0,2:2:6.02:86,6,0
chr10	79940949	.	TACTG	T	1465.81	PASS	AB=0.532;AC=3;AF=0.054;AN=56;BaseQRankSum=8.548;DP=519;FS=0.000;HRun=0;HaplotypeScore=84.8089;InbreedingCoeff=0.6545;MQ=74.05;MQ0=0;MQRankSum=-7.275;QD=45.81;ReadPosRankSum=-0.280;VQSLOD=3.9631;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39.13:0,39,1037	0/0:7,0:7:12.04:0,12,324	0/0:11,0:11:33.11:0,33,774	0/0:9,0:9:21.06:0,21,399	0/0:19,0:19:57.20:0,57,1522	0/0:27,0:27:78.27:0,78,2095	0/0:16,0:16:48.16:0,48,1261	0/0:35,0:35:99:0,99,2639	0/0:21,0:21:63.22:0,63,1677	0/0:25,0:25:75.26:0,75,2017	0/0:28,0:28:84.29:0,84,2225	0/0:18,0:18:51.18:0,51,1372	0/0:14,0:14:42.14:0,42,1128	0/0:15,0:15:45.15:0,45,1206	0/0:14,0:14:39.13:0,39,998	0/0:17,0:17:51.18:0,51,1368	0/0:21,0:21:60.21:0,60,1619	0/0:23,0:23:63.17:0,63,1639	0/0:17,0:17:45.14:0,45,1160	0/0:25,0:25:75.26:0,75,2025	0/0:29,0:29:84.25:0,84,2196	0/0:7,0:7:21.07:0,21,567	0/0:22,0:22:66.23:0,66,1781	0/0:11,0:11:33.11:0,33,877	0/0:20,0:20:54.17:0,54,1394	0/1:3,22:25:11.78:1172,0,12	0/0:22,0:22:57.20:0,57,1539	1/1:0,7:7:21.07:398,21,0
chr10	79942354	.	A	AGAG	959.01	PASS	AC=6;AF=0.125;AN=48;BaseQRankSum=1.342;DP=491;FS=3.775;HRun=0;HaplotypeScore=91.3461;InbreedingCoeff=0.9093;MQ=46.34;MQ0=50;MQRankSum=-1.861;QD=16.53;ReadPosRankSum=-0.065;VQSLOD=3.2363;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:21,2:22:50.79:585,51,0	0/0:8,0:8:18.04:0,18,236	./.	./.	0/0:25,0:23:45.05:0,45,544	1/1:4,18:21:14.98:216,15,0	0/0:20,0:16:26.99:0,27,301	0/0:34,0:12:21.03:0,21,232	0/0:22,0:22:32.06:0,32,381	0/0:22,0:20:45.11:0,45,558	0/0:17,0:17:30.09:0,30,408	0/0:15,0:13:17.97:0,18,189	0/0:16,0:14:15:0,15,169	./.	0/0:30,0:24:45.14:0,45,624	0/0:19,0:14:30.03:0,30,369	0/0:32,0:32:51.14:0,51,668	0/0:20,0:19:42.03:0,42,496	0/0:16,0:8:18.05:0,18,239	0/0:15,0:15:27.06:0,27,361	0/0:16,0:14:22.83:0,23,248	0/0:27,0:25:44.94:0,45,505	0/0:19,0:18:33:0,33,378	0/0:17,0:14:2.87:0,3,42	0/0:11,0:11:17.02:0,17,185	1/1:9,0:9:18.03:293,18,0	0/0:19,0:19:51.06:0,51,663	./.
chr10	79942387	.	G	GGAA	65.40	PASS	AB=0.939;AC=6;AF=0.115;AN=52;BaseQRankSum=4.230;DP=492;FS=0.000;HRun=0;HaplotypeScore=85.1363;InbreedingCoeff=0.0290;MQ=40.89;MQ0=80;MQRankSum=-5.125;QD=0.83;ReadPosRankSum=-3.231;VQSLOD=0.2847;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:15:14.84:0,15,95	0/0:8,0:8:12.04:0,12,175	./.	./.	0/0:22,0:16:29.99:0,30,355	0/0:24,0:23:22.05:0,22,226	0/0:20,0:15:18.05:0,18,226	0/0:48,0:11:21.02:0,21,242	0/0:17,0:17:33.09:0,33,443	0/0:27,0:23:52.44:0,52,724	0/0:17,0:16:36.31:0,36,434	0/0:13,0:11:24.80:0,25,273	0/1:14,2:13:88.26:88,0,107	1/1:8,0:3:0.47:1,0,0	0/0:25,0:21:51.12:0,51,670	0/0:19,0:14:24.06:0,24,314	0/0:30,0:30:62.64:0,63,821	0/0:17,0:16:33.10:0,33,446	0/0:19,0:8:18.05:0,18,239	0/0:18,0:18:45.06:0,45,548	0/0:14,0:10:24.53:0,25,310	0/1:23,2:23:59.23:59,0,263	0/1:15,1:14:12.27:12,0,266	0/0:14,0:11:0.78:0,1,113	0/0:11,0:8:14.99:0,15,180	0/1:14,0:11:4.75:5,0,91	0/0:20,0:18:45.13:0,45,608	0/0:6,0:2:6.02:0,6,81
chr10	79942415	.	G	GAAG	400.23	PASS	AB=0.981;AC=18;AF=0.346;AN=52;BaseQRankSum=2.063;DP=547;FS=6.001;HRun=0;HaplotypeScore=107.4232;InbreedingCoeff=0.0479;MQ=41.11;MQ0=83;MQRankSum=-4.485;QD=1.27;ReadPosRankSum=-2.913;VQSLOD=0.6715;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:14:9.27:0,9,54	0/0:5,0:5:7.99:0,8,49	./.	./.	0/1:28,0:17:6.30:6,0,78	0/1:23,0:22:23.80:24,0,127	0/0:19,0:14:11.77:0,12,73	1/1:33,0:14:1.70:3,2,0	0/0:24,0:23:15.03:0,15,176	0/0:28,0:24:5.59:0,6,98	0/0:26,0:23:19.25:0,19,114	1/1:22,0:21:8.64:49,9,0	0/1:19,0:15:4.24:56,0,4	1/1:11,0:7:2.96:19,3,0	0/1:32,0:29:63.69:64,0,106	0/0:23,0:19:12.30:0,12,157	0/1:29,0:29:99:117,0,135	0/0:18,0:17:2.07:0,2,19	0/0:12,0:8:11.58:0,12,83	0/0:34,0:21:4.02:0,4,129	0/0:15,0:11:8.94:0,9,70	0/1:19,0:17:2:49,0,2	1/1:21,0:15:8.77:51,9,0	0/1:16,0:13:5.30:5,0,13	0/1:16,0:12:23.78:24,0,51	0/1:15,0:12:28.83:38,0,29	0/1:23,6:26:35.72:46,0,36	0/0:8,0:4:8.26:0,8,50
chr10	79942605	.	A	AG	135.42	PASS	AB=0.600;AC=9;AF=0.188;AN=48;BaseQRankSum=5.010;DP=449;FS=10.334;HRun=0;HaplotypeScore=52.1377;InbreedingCoeff=0.6870;MQ=72.05;MQ0=1;MQRankSum=1.097;QD=15.05;ReadPosRankSum=-3.594;VQSLOD=3.4905;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:45.10:0,45,590	0/0:13,0:13:39.12:0,39,530	0/0:11,0:11:24.42:0,24,398	0/0:23,0:22:63.20:0,63,842	0/0:26,0:25:69.20:0,69,943	0/0:31,0:30:78.26:0,78,1089	0/0:21,0:21:63.21:0,63,878	0/0:28,0:28:84.26:0,84,1143	0/0:25,0:25:72.15:0,72,963	0/0:20,0:20:60.19:0,60,825	0/0:23,0:23:66.18:0,66,886	1/1:1,0:1:3.01:30,3,0	./.	./.	0/0:21,0:21:60.16:0,60,817	0/0:31,0:30:84.18:0,84,1111	0/0:23,0:23:63.21:0,63,881	0/0:9,0:9:27.05:0,27,355	0/0:22,0:22:66.20:0,66,888	0/0:28,0:28:84.19:0,84,1114	0/0:22,0:22:63.21:0,63,880	1/1:2,0:2:6:56,6,0	./.	./.	1/1:0,2:2:6.02:90,6,0	0/1:1,2:3:32.94:66,0,33	0/0:43,0:42:99:0,126,1720	1/1:1,0:1:2.99:23,3,0
chr10	79942839	.	CTTTGAG	C	4024.39	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=0.424;DP=379;FS=107.621;HRun=0;HaplotypeScore=153.5758;InbreedingCoeff=0.8940;MQ=53.34;MQ0=0;MQRankSum=-8.545;QD=68.21;ReadPosRankSum=2.993;VQSLOD=0.6222;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:23:45.15:0,45,1313	0/0:10,0:10:30.10:0,30,888	0/0:3,0:3:6.02:0,6,100	0/0:7,0:7:0.32:0,0,187	0/0:21,0:21:60.21:0,60,1711	0/0:25,0:24:60.21:0,60,1718	0/0:15,0:14:39.13:0,39,1085	0/0:8,0:7:21.07:0,21,602	0/0:11,0:11:18.06:0,18,508	0/0:25,0:25:75.24:0,75,2095	0/0:22,0:22:66.23:0,66,1838	1/1:0,8:7:21.07:504,21,0	1/1:0,5:5:15.05:384,15,0	1/1:0,3:3:9.03:225,9,0	0/0:21,0:21:39.13:0,39,1133	0/0:17,0:17:27.08:0,27,719	0/0:22,0:22:45.14:0,45,1130	0/0:3,0:3:9.03:0,9,239	0/0:16,0:16:39.12:0,39,1067	0/0:28,0:27:78.27:0,78,2244	0/0:13,0:12:33.10:0,33,900	1/1:0,8:8:21.01:537,21,0	1/1:0,7:6:18.06:461,18,0	1/1:0,6:6:9.03:223,9,0	1/1:0,8:8:24.08:614,24,0	1/1:0,12:12:36.12:922,36,0	0/0:25,0:25:69.22:0,69,1951	1/1:0,2:2:6.02:154,6,0
chr10	79944343	.	A	AT	4877.84	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.170;DP=570;FS=0.372;HRun=5;HaplotypeScore=64.5142;InbreedingCoeff=0.9989;MQ=85.20;MQ0=0;MQRankSum=1.191;QD=36.13;ReadPosRankSum=2.112;VQSLOD=4.4769;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.17:0,66,709	0/0:9,0:9:27.07:0,27,290	0/0:16,0:16:39.10:0,39,418	0/0:19,0:19:51.04:0,51,517	0/0:24,0:24:72.18:0,72,774	0/0:25,0:25:72.15:0,72,757	0/0:18,0:18:51.13:0,51,548	0/0:30,0:30:75.18:0,75,806	0/0:20,0:20:54.14:0,54,580	0/0:34,0:34:96.24:0,96,1032	0/0:21,0:21:60.14:0,60,637	1/1:1,23:24:63.20:829,63,0	1/1:3,16:19:48.16:631,48,0	1/1:1,13:14:30.10:395,30,0	0/0:23,0:23:63.15:0,63,676	0/0:23,0:23:66.17:0,66,708	0/0:10,0:10:27.07:0,27,290	0/0:21,0:21:54.09:0,54,567	0/0:19,0:19:48.12:0,48,516	0/0:25,0:25:75.17:0,75,798	0/0:30,0:29:84.21:0,84,903	1/1:0,18:18:51.17:671,51,0	1/1:0,20:20:60.20:790,60,0	1/1:0,15:15:45.15:592,45,0	0/0:14,0:14:39.10:0,39,419	1/1:0,18:18:54.15:694,54,0	0/0:30,0:29:87.22:0,87,935	1/1:0,7:7:21.07:276,21,0
chr10	79944803	.	GT	G	5079.24	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=17.614;DP=625;FS=1.518;HRun=5;HaplotypeScore=90.3151;InbreedingCoeff=0.9980;MQ=84.61;MQ0=0;MQRankSum=-4.935;QD=30.97;ReadPosRankSum=2.737;VQSLOD=5.3300;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.17:0,54,717	0/0:11,0:11:24.08:0,24,328	0/0:28,0:28:78.25:0,78,1038	0/0:23,0:23:57.11:0,57,717	0/0:31,0:31:90.29:0,90,1216	0/0:16,0:16:42.14:0,42,575	0/0:16,0:16:45.14:0,45,599	0/0:33,0:33:96.31:0,96,1299	0/0:19,0:19:54.15:0,54,705	0/0:25,0:25:69.23:0,69,942	0/0:27,0:27:72.22:0,72,958	1/1:1,21:22:63.18:714,63,0	1/1:0,21:21:60.12:665,60,0	1/1:1,13:14:33.09:374,33,0	0/0:22,0:22:63.21:0,63,862	0/0:27,0:27:81.24:0,81,1075	0/0:22,0:22:66.22:0,66,903	0/0:12,0:12:30.10:0,30,410	0/0:22,0:22:57.18:0,57,757	0/0:29,0:29:84.26:0,84,1132	0/0:19,0:19:57.16:0,57,745	1/1:2,18:20:54.15:611,54,0	1/1:1,27:28:78.22:884,78,0	1/1:0,30:30:81.23:919,81,0	0/0:25,0:25:69.23:0,69,944	1/1:1,22:23:28.15:707,28,0	0/0:36,0:36:99:0,105,1402	1/1:0,6:6:18.05:204,18,0
chr10	79945122	.	GA	G	1102.44	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.034;DP=704;FS=5.386;HRun=4;HaplotypeScore=80.8018;InbreedingCoeff=0.9842;MQ=83.90;MQ0=0;MQRankSum=-1.395;QD=32.42;ReadPosRankSum=-0.657;VQSLOD=3.8014;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1385	0/0:4,0:4:12.04:0,12,168	0/0:27,0:27:70.12:0,70,949	0/0:30,0:30:81.71:0,82,1059	0/0:24,0:24:66.22:0,66,922	0/0:30,0:30:87.29:0,87,1218	0/0:21,0:21:63.21:0,63,882	0/0:33,0:33:96.29:0,96,1322	0/0:23,0:23:66.19:0,66,903	0/0:28,0:28:74.53:0,75,1038	0/0:23,0:23:69.23:0,69,966	0/0:24,0:24:69.23:0,69,955	0/0:28,0:28:81.26:0,81,1114	0/0:23,0:23:69.20:0,69,945	0/0:30,0:30:81.26:0,81,1119	0/0:25,0:25:72.23:0,72,991	0/0:13,0:13:36.10:0,36,477	0/0:19,0:19:57.15:0,57,776	0/0:22,0:22:63.21:0,63,881	0/0:38,0:38:99:0,108,1498	0/0:24,0:24:72.24:0,72,1008	0/0:30,0:30:90.30:0,90,1260	0/0:26,0:26:69.23:0,69,966	0/0:27,0:27:78.22:0,78,1070	0/0:30,0:30:84.28:0,84,1176	1/1:0,22:22:66.20:792,66,0	0/0:33,0:33:93.31:0,93,1300	1/1:0,12:12:36.11:432,36,0
chr10	79945783	.	C	CGTGG	7900.39	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-2.851;DP=511;FS=8.569;HRun=0;HaplotypeScore=79.0284;InbreedingCoeff=0.9902;MQ=86.09;MQ0=0;MQRankSum=-1.802;QD=71.82;ReadPosRankSum=1.435;VQSLOD=7.0899;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.13:0,39,818	0/0:7,0:7:18.06:0,18,378	0/0:19,0:19:57.20:0,57,1150	0/0:17,0:17:51.16:0,51,969	0/0:24,0:24:69.22:0,69,1409	0/0:24,0:24:72.24:0,72,1459	0/0:21,0:21:63.21:0,63,1268	0/0:33,0:33:96.32:0,96,1976	0/0:15,0:15:45.12:0,45,831	0/0:18,0:18:54.19:0,54,1133	0/0:25,0:25:75.24:0,75,1504	1/1:0,11:11:33.11:955,33,0	1/1:2,10:12:36.08:975,36,0	1/1:2,12:15:42.14:1215,42,0	0/0:28,0:28:84.28:0,84,1726	0/0:10,0:10:30.09:0,30,593	0/0:16,0:16:48.16:0,48,1007	0/0:9,0:9:21.07:0,21,439	0/0:26,0:26:78.27:0,78,1602	0/0:29,0:29:87.30:0,87,1823	0/0:24,0:24:69.24:0,69,1445	1/1:1,6:9:18.06:520,18,0	1/1:2,7:10:21.07:608,21,0	1/1:0,17:19:42.14:1216,42,0	0/0:12,0:12:36.12:0,36,755	1/1:5,20:30:23.99:2065,24,0	0/0:31,0:31:93.29:0,93,1873	1/1:0,4:4:12.04:347,12,0
chr10	79946030	.	GA	G	1112.43	PASS	AB=0.747;AC=17;AF=0.304;AN=56;BaseQRankSum=9.544;DP=602;FS=1.385;HRun=14;HaplotypeScore=80.5532;InbreedingCoeff=0.4497;MQ=58.36;MQ0=8;MQRankSum=0.597;QD=4.47;ReadPosRankSum=5.872;VQSLOD=1.5172;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,6:42:41.29:0,41,575	0/0:10,0:10:24.03:0,24,222	0/0:7,0:4:0:0,0,0	0/0:4,0:4:1.03:0,1,17	0/0:23,0:25:42.92:0,43,411	0/1:20,3:24:7.93:8,0,336	0/0:25,0:27:49.95:0,50,455	0/0:22,0:23:5.91:0,6,301	0/0:21,0:22:17.02:0,17,175	0/0:32,0:36:50.50:0,51,411	0/1:14,3:18:2.33:2,0,238	1/1:7,14:23:27.83:176,28,0	1/1:5,13:18:32.68:226,33,0	0/1:7,11:17:1.13:138,0,1	0/0:14,1:15:6.44:0,6,198	0/0:23,0:22:27.12:0,27,363	0/0:26,0:28:47.61:0,48,393	0/0:22,0:24:38.31:0,38,303	0/0:22,0:25:44.55:0,45,356	0/1:26,3:29:10.82:11,0,312	0/0:17,1:21:32.42:0,32,300	0/1:8,12:19:26.15:135,0,26	0/1:8,6:14:25.35:25,0,53	1/1:10,23:34:61.49:417,61,0	1/1:6,0:14:10.16:29,10,0	0/1:9,0:22:2.62:43,0,3	0/0:18,0:17:32.95:0,33,290	1/1:2,1:14:23.35:79,23,0
chr10	79946441	.	TC	T	6729.78	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=18.738;DP=757;FS=0.314;HRun=2;HaplotypeScore=110.5560;InbreedingCoeff=0.9993;MQ=86.38;MQ0=0;MQRankSum=-5.828;QD=34.87;ReadPosRankSum=1.606;VQSLOD=4.6327;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1823	0/0:12,0:12:36.11:0,36,520	0/0:29,0:29:78.22:0,78,1112	0/0:23,0:23:69.17:0,69,985	0/0:28,0:28:84.28:0,84,1256	0/0:35,0:35:99:0,105,1574	0/0:29,0:29:87.28:0,87,1282	0/0:27,0:27:78.26:0,78,1160	0/0:31,0:31:93.30:0,93,1370	0/0:36,0:36:99:0,105,1574	0/0:21,0:21:57.19:0,57,849	1/1:2,21:23:63.20:818,63,0	1/1:0,23:23:63.20:818,63,0	1/1:2,29:31:81.26:1051,81,0	0/0:36,0:36:99:0,108,1585	0/0:26,0:26:78.26:0,78,1169	0/0:21,0:21:60.20:0,60,899	0/0:20,0:20:60.14:0,60,852	0/0:25,0:25:75.24:0,75,1102	0/0:37,0:37:99:0,105,1533	0/0:31,0:31:90.29:0,90,1318	1/1:0,25:25:66.21:857,66,0	1/1:2,32:34:90.26:1167,90,0	1/1:0,18:18:45.15:584,45,0	0/0:25,0:25:75.25:0,75,1122	1/1:1,31:32:51.33:1162,51,0	0/0:31,0:31:93.29:0,93,1368	1/1:0,7:7:21.07:272,21,0
chr10	79946611	.	C	CAAA	3848	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=5.958;DP=677;FS=0.912;HRun=10;HaplotypeScore=115.7958;InbreedingCoeff=0.9806;MQ=68.46;MQ0=0;MQRankSum=-1.340;QD=23.04;ReadPosRankSum=-0.673;VQSLOD=1.9828;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:16:29.45:0,29,196	0/0:15,0:16:44.50:0,44,539	0/0:21,0:19:21.72:0,22,315	0/0:20,0:20:22.82:0,23,294	0/0:44,0:46:99:0,128,1494	0/0:5,0:29:47.38:0,47,298	0/0:8,0:8:18.02:0,18,213	0/0:29,0:29:63.58:0,64,744	0/0:25,0:27:58.76:0,59,741	0/0:27,0:27:60.14:0,60,725	0/0:32,0:32:82.06:0,82,955	1/1:4,14:20:9.03:173,9,0	1/1:4,14:18:12.04:213,12,0	1/1:17,2:21:30.18:557,30,0	0/0:28,0:28:66.13:0,66,800	0/0:24,0:25:35.46:0,35,667	0/0:22,0:25:62.89:0,63,663	0/0:12,0:14:28.26:0,28,341	0/0:23,0:23:53.73:0,54,618	0/0:32,0:33:83.57:0,84,1005	0/0:18,0:18:48.11:0,48,567	1/1:3,18:21:51.17:945,51,0	1/1:3,23:30:51.11:877,51,0	1/1:3,23:26:29.69:532,30,0	1/1:31,0:31:41.50:550,42,0	0/0:25,0:25:57.14:0,57,688	0/0:27,0:28:81.09:0,81,920	0/0:17,0:17:34.43:0,34,435
chr10	79946621	.	A	AAAG	2256.16	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=7.247;DP=655;FS=2.774;HRun=0;HaplotypeScore=104.5326;InbreedingCoeff=0.4704;MQ=69.25;MQ0=0;MQRankSum=-1.186;QD=15.45;ReadPosRankSum=2.372;VQSLOD=3.4842;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:44.77:0,45,380	0/0:18,0:18:51.14:0,51,763	0/0:17,0:16:43.71:0,44,531	0/0:23,0:21:46.05:0,46,571	0/0:47,0:47:99:0,141,2098	0/0:26,0:26:69.04:0,69,631	0/0:9,0:9:27.06:0,27,356	0/0:32,0:32:81.70:0,82,1161	0/0:25,0:25:73.70:0,74,1043	0/0:28,0:28:84.21:0,84,1173	0/0:34,0:34:99:0,99,1410	0/1:17,0:17:15.37:81,0,15	0/1:15,0:15:27.57:93,0,28	0/1:15,0:19:99:138,0,103	0/0:26,0:26:75.17:0,75,1120	0/0:25,0:25:47.63:0,48,1002	0/0:26,0:26:75.15:0,75,1030	0/0:16,0:16:41.55:0,42,541	0/0:21,0:21:63.18:0,63,916	0/0:35,0:35:99:0,102,1479	0/0:17,0:17:51.14:0,51,763	1/1:19,0:19:34.19:508,34,0	1/1:28,0:28:2.66:436,3,0	0/1:24,0:24:11.76:260,0,12	1/1:0,22:24:42.14:895,42,0	0/0:23,0:23:69.20:0,69,1013	0/0:27,0:27:81.23:0,81,1224	0/0:14,0:14:41.88:0,42,611
chr10	79947000	.	GACATA	G	6081.08	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.594;DP=565;FS=10.092;HRun=0;HaplotypeScore=110.7325;InbreedingCoeff=0.9987;MQ=74.10;MQ0=1;MQRankSum=-9.153;QD=58.47;ReadPosRankSum=2.129;VQSLOD=5.6003;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:42.12:0,42,1275	0/0:14,0:14:42.13:0,42,1206	0/0:15,0:15:45.15:0,45,1360	0/0:15,0:15:45.15:0,45,1346	0/0:19,0:19:57.20:0,57,1734	0/0:28,0:28:84.29:0,84,2681	0/0:14,0:14:39.12:0,39,1137	0/0:38,0:38:99:0,111,3331	0/0:20,0:20:60.21:0,60,1935	0/0:32,0:32:90.30:0,90,2652	0/0:23,0:23:66.13:0,66,1933	1/1:1,12:13:36.12:802,36,0	1/1:1,17:18:45.15:1002,45,0	1/1:0,13:13:39.13:868,39,0	0/0:20,0:20:60.21:0,60,1896	0/0:22,0:22:66.23:0,66,2132	0/0:15,0:15:45.13:0,45,1319	0/0:28,0:28:75.25:0,75,2194	0/0:19,0:19:52.80:0,53,1628	0/0:28,0:28:78.27:0,78,2499	0/0:13,0:13:39.12:0,39,1149	1/1:0,24:23:66.14:1408,66,0	1/1:0,26:26:66.23:1467,66,0	1/1:0,9:9:24.08:534,24,0	0/0:27,0:27:81.26:0,81,2420	0/0:24,0:24:72.23:0,72,2137	0/0:26,0:26:75.24:0,75,2271	0/0:7,0:7:21.07:0,21,678
chr10	79947838	.	TC	T	827.45	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.412;DP=678;FS=2.522;HRun=4;HaplotypeScore=71.5437;InbreedingCoeff=0.9956;MQ=80.30;MQ0=1;MQRankSum=0.436;QD=29.55;ReadPosRankSum=0.971;VQSLOD=3.9127;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,141,1955	0/0:12,0:12:36.07:0,36,452	0/0:33,0:32:78.61:0,79,1022	0/0:20,0:19:33.11:0,33,460	0/0:24,0:24:69.22:0,69,946	0/0:20,0:20:60.20:0,60,840	0/0:25,0:25:75.24:0,75,1032	0/0:30,0:30:87.27:0,87,1184	0/0:18,0:18:54.18:0,54,756	0/0:19,0:19:51.16:0,51,696	0/0:26,0:26:66.22:0,66,924	0/0:13,0:13:39.13:0,39,545	0/0:24,0:24:72.20:0,72,986	0/0:23,0:23:69.19:0,69,929	0/0:28,0:28:84.28:0,84,1175	0/0:37,0:37:99:0,108,1512	0/0:25,0:25:72.24:0,72,1008	0/0:17,0:17:42.14:0,42,588	0/0:26,0:26:69.15:0,69,851	0/0:23,0:23:66.20:0,66,904	0/0:40,0:40:99:0,117,1634	0/0:22,0:22:66.21:0,66,907	0/0:24,0:24:66.21:0,66,899	0/0:35,0:34:99:0,99,1385	0/0:20,0:20:54.18:0,54,756	1/1:0,22:22:63.16:731,63,0	0/0:13,0:13:39.13:0,39,546	1/1:0,6:6:18.06:216,18,0
chr10	79948279	.	CA	C	374.83	PASS	AB=0.667;AC=13;AF=0.241;AN=54;BaseQRankSum=5.631;DP=267;FS=25.329;HRun=2;HaplotypeScore=31.1018;InbreedingCoeff=0.7408;MQ=51.24;MQ0=2;MQRankSum=-5.580;QD=18.74;ReadPosRankSum=1.530;VQSLOD=1.9647;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:42.13:0,42,605	0/0:8,0:8:21.07:0,21,294	0/0:10,0:5:15:0,15,159	0/0:14,0:6:17.99:0,18,186	0/0:9,0:9:24:0,24,304	0/0:8,0:8:21.05:0,21,271	0/0:18,0:18:51.16:0,51,723	0/0:14,0:13:39.13:0,39,568	0/0:15,0:15:39.11:0,39,548	0/0:10,0:9:27.09:0,27,394	0/0:8,0:8:24.08:0,24,347	1/1:1,2:3:6.02:78,6,0	1/1:0,3:3:9.03:116,9,0	1/1:1,2:2:6.02:77,6,0	0/0:10,0:9:30.03:0,30,393	0/0:13,0:13:24.08:0,24,349	0/0:18,0:17:54.16:0,54,749	0/0:16,0:16:35.92:0,36,501	0/0:9,0:6:18.06:0,18,249	0/0:10,0:10:21.07:0,21,294	0/0:17,0:17:33.04:0,33,417	./.	1/1:1,3:3:6.02:77,6,0	1/1:0,1:1:3.01:39,3,0	0/0:6,0:6:12.04:0,12,174	0/1:2,2:4:34.81:68,0,35	0/0:10,0:10:23.99:0,24,271	1/1:0,2:2:6.02:78,6,0
chr10	79949471	.	G	GTTTGTTTGTT	1829.35	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=6.731;DP=407;FS=30.840;HRun=0;HaplotypeScore=128.9911;InbreedingCoeff=0.7963;MQ=78.63;MQ0=2;MQRankSum=-7.168;QD=40.65;ReadPosRankSum=-1.995;VQSLOD=1.3515;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:57.20:0,57,1518	0/0:5,0:5:15.05:0,15,489	0/0:20,0:18:48.15:0,48,1356	0/0:25,0:24:68.74:0,69,1799	0/0:14,0:14:39.11:0,39,1132	0/0:23,0:21:30.10:0,30,877	0/0:19,0:19:48.16:0,48,1480	0/0:23,0:23:63.21:0,63,1786	0/0:14,0:14:33.11:0,33,1002	0/0:20,0:20:60.21:0,60,1853	0/0:15,0:15:33.11:0,33,1030	1/1:3,3:9:17.98:453,18,0	1/1:1,0:1:3.01:123,3,0	1/1:5,0:5:9.02:136,9,0	0/0:29,0:29:54.19:0,54,1703	0/0:9,0:9:21.07:0,21,536	0/0:15,0:15:24.08:0,24,728	0/0:12,0:12:24.08:0,24,708	0/0:16,0:16:42.13:0,42,1278	0/0:16,0:16:48.16:0,48,1476	0/0:32,0:32:90.25:0,90,2597	1/1:3,0:3:9.03:242,9,0	1/1:3,0:3:5.99:124,6,0	1/1:2,3:5:6.02:308,6,0	0/0:17,0:16:39.12:0,39,971	0/1:15,0:15:99:490,0,162	0/0:12,0:12:27.09:0,27,820	1/1:4,0:4:8.98:130,9,0
chr10	79949475	.	G	GT	614.38	PASS	AB=0.755;AC=11;AF=0.196;AN=56;BaseQRankSum=7.023;DP=397;FS=39.616;HRun=3;HaplotypeScore=60.8282;InbreedingCoeff=0.4616;MQ=76.90;MQ0=2;MQRankSum=-5.401;QD=16.60;ReadPosRankSum=-0.517;VQSLOD=1.2197;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:56.19:0,56,788	0/0:5,0:5:15.05:0,15,210	0/0:26,0:19:51.16:0,51,676	0/0:27,0:24:66.17:0,66,870	0/0:15,0:15:39.11:0,39,526	0/0:20,0:18:36.12:0,36,490	0/0:20,0:20:51.17:0,51,711	0/0:22,0:22:66.20:0,66,891	0/0:14,0:14:33.09:0,33,444	0/0:21,0:21:63.21:0,63,878	0/0:12,0:12:36.12:0,36,495	1/1:2,0:2:3.01:39,3,0	0/1:1,1:2:3.08:36,0,3	1/1:4,0:4:9:86,9,0	0/0:26,0:26:54.18:0,54,754	0/0:9,0:9:21.07:0,21,293	0/0:14,0:14:27.09:0,27,377	0/0:12,0:12:24.08:0,24,336	0/0:15,0:15:45.15:0,45,625	0/0:17,0:17:48.16:0,48,671	0/0:33,0:33:90.30:0,90,1258	0/1:1,1:3:12.62:65,0,13	1/1:1,1:2:5.99:62,6,0	0/1:4,0:4:0.59:25,0,1	0/0:16,0:15:42.14:0,42,585	0/1:4,9:14:65.68:380,0,66	0/0:11,0:11:27.09:0,27,377	0/1:4,2:6:23.40:71,0,23
chr10	79949553	.	GTGTA	G	617.99	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=3.308;DP=363;FS=13.993;HRun=0;HaplotypeScore=76.8908;InbreedingCoeff=0.6426;MQ=50.07;MQ0=13;MQRankSum=-3.847;QD=8.83;ReadPosRankSum=-1.076;VQSLOD=1.1610;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:39.03:0,39,619	0/0:5,0:5:12:0,12,162	0/0:9,0:6:18.01:0,18,224	0/0:27,0:21:62.72:0,63,633	0/0:12,0:11:8.97:0,9,175	0/0:16,0:15:24.05:0,24,451	0/0:16,0:16:42.05:0,42,801	0/0:21,0:18:44.25:0,44,484	0/0:21,0:20:57:0,57,936	0/0:12,0:12:36.06:0,36,493	0/0:11,0:10:5.99:0,6,50	1/1:8,1:8:17.95:165,18,0	1/1:6,0:5:11.92:95,12,0	1/1:5,6:10:24.01:242,24,0	0/0:15,0:12:32.93:0,33,409	0/0:8,0:8:12.26:0,12,164	0/0:18,0:17:44.89:0,45,779	0/0:18,0:17:31.10:0,31,826	0/1:7,0:7:3.60:4,0,205	0/0:9,0:7:11.94:0,12,179	0/0:27,0:23:50.84:0,51,615	./.	1/1:8,0:8:8.94:68,9,0	1/1:13,1:12:11.10:96,11,0	0/0:13,0:12:12.03:0,12,173	0/1:9,0:8:53.81:54,0,117	0/0:17,0:17:42.03:0,42,792	0/1:6,0:5:25.64:65,0,26
chr10	79949653	.	GCT	G	244.28	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=5.394;DP=459;FS=17.081;HRun=0;HaplotypeScore=72.0139;InbreedingCoeff=0.3995;MQ=80.52;MQ0=1;MQRankSum=-0.796;QD=3.70;ReadPosRankSum=3.586;VQSLOD=0.5872;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:25.58:26,0,171	0/0:6,0:6:9:0,9,140	0/0:21,1:21:49.84:0,50,544	0/0:12,0:11:32.74:0,33,318	0/0:26,0:26:70.06:0,70,1118	0/1:21,0:21:18.28:18,0,141	0/0:11,0:11:33.09:0,33,594	0/0:17,0:17:48.55:0,49,665	0/0:17,0:17:50.96:0,51,692	0/0:13,0:13:38.94:0,39,356	0/0:22,0:22:62.81:0,63,937	0/0:10,0:10:12.07:0,12,51	0/0:11,0:11:5.75:0,6,44	0/0:12,0:12:20.39:0,20,93	0/0:18,0:18:54.13:0,54,860	0/0:12,0:12:33.06:0,33,591	0/0:28,0:28:78.19:0,78,1315	0/0:19,0:19:51.11:0,51,838	0/0:13,0:13:35.73:0,36,459	0/0:22,0:22:56.96:0,57,847	0/0:7,0:7:20.99:0,21,252	0/0:18,0:17:29.13:0,29,159	0/0:11,0:11:25.92:0,26,145	0/0:13,0:13:27.16:0,27,109	1/1:0,15:16:21.07:314,21,0	0/0:20,0:19:53.94:0,54,652	0/0:19,0:19:36.84:0,37,686	0/0:14,0:14:12.04:0,12,181
chr10	79949654	.	CTTT	C	1221.70	PASS	AB=0.783;AC=12;AF=0.214;AN=56;BaseQRankSum=2.465;DP=468;FS=14.962;HRun=14;HaplotypeScore=77.0123;InbreedingCoeff=0.7743;MQ=78.44;MQ0=1;MQRankSum=-0.739;QD=13.28;ReadPosRankSum=5.705;VQSLOD=0.2062;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:29:31.90:0,32,153	0/0:5,0:6:9.03:0,9,168	0/0:17,0:19:26.07:0,26,307	0/0:12,0:11:8.71:0,9,148	0/0:21,0:26:60.17:0,60,958	0/0:6,0:20:21.82:0,22,81	0/0:9,0:11:33.09:0,33,545	0/0:17,0:18:37.35:0,37,624	0/0:17,0:17:39.09:0,39,653	0/0:4,0:13:35.93:0,36,325	0/0:22,0:23:60.18:0,60,1019	1/1:2,8:10:12:140,12,0	1/1:0,10:11:21:228,21,0	1/1:2,10:12:18.01:208,18,0	0/0:18,0:18:42.14:0,42,686	0/0:11,0:12:33.10:0,33,557	0/0:25,0:28:75.21:0,75,1258	0/0:19,0:19:42.14:0,42,763	0/0:10,0:13:31.27:0,31,409	0/0:23,0:23:38.81:0,39,699	0/0:5,0:7:12.02:0,12,179	0/1:4,10:16:5.16:217,0,5	1/1:5,6:11:15.44:189,15,0	1/1:0,12:13:36.04:404,36,0	0/1:18,0:18:12.39:12,0,71	0/0:11,0:22:48.11:0,48,618	0/0:15,0:19:49.39:0,49,763	0/0:0,0:17:12.04:0,12,172
chr10	79951015	.	CA	C	4685.61	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.671;DP=621;FS=3.743;HRun=3;HaplotypeScore=57.9529;InbreedingCoeff=0.9973;MQ=77.37;MQ0=0;MQRankSum=-1.552;QD=34.71;ReadPosRankSum=1.349;VQSLOD=5.4997;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:33.11:0,33,475	0/0:12,0:12:36.11:0,36,500	0/0:16,0:16:42.14:0,42,598	0/0:11,0:11:33.04:0,33,434	0/0:36,0:36:99:0,108,1555	0/0:33,0:33:99:0,99,1406	0/0:6,0:6:18.06:0,18,259	0/0:27,0:27:78.25:0,78,1106	0/0:24,0:24:72.23:0,72,1018	0/0:27,0:27:78.26:0,78,1109	0/0:32,0:32:90.29:0,90,1263	1/1:0,22:22:54.17:669,54,0	1/1:0,23:23:65.96:818,66,0	1/1:0,21:21:63.20:781,63,0	0/0:28,0:28:84.27:0,84,1191	0/0:31,0:31:93.31:0,93,1339	0/0:14,0:14:39.13:0,39,561	0/0:19,0:19:48.16:0,48,691	0/0:13,0:13:39.13:0,39,561	0/0:32,0:32:90.30:0,90,1296	0/0:28,0:28:84.28:0,84,1208	1/1:0,32:32:93.29:1153,93,0	1/1:0,25:25:72.23:892,72,0	1/1:0,12:12:30.09:372,30,0	0/0:16,0:16:48.14:0,48,659	0/0:27,0:27:81.27:0,81,1167	0/0:34,0:34:99:0,102,1466	0/0:9,0:9:21.07:0,21,302
chr10	79951572	.	T	TGA	8343.50	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=18.007;DP=670;FS=3.879;HRun=0;HaplotypeScore=124.3352;InbreedingCoeff=0.9900;MQ=80.27;MQ0=0;MQRankSum=-10.708;QD=48.79;ReadPosRankSum=3.836;VQSLOD=5.5049;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,154,2463	0/0:11,0:11:27.09:0,27,440	0/0:23,0:23:60.17:0,60,890	0/0:22,0:22:36.39:0,36,718	0/0:29,0:29:84.29:0,84,1369	0/0:28,0:28:84.27:0,84,1344	0/0:19,0:19:57.18:0,57,905	0/0:32,0:32:90.30:0,90,1446	0/0:24,0:24:72.23:0,72,1141	0/0:29,0:29:81.23:0,81,1292	0/0:17,0:17:51.15:0,51,783	1/1:0,23:23:66.23:1232,66,0	1/1:3,14:17:48.15:866,48,0	1/1:0,29:29:87.30:1623,87,0	0/0:25,0:24:75.23:0,75,1173	0/0:25,0:25:72.23:0,72,1147	0/0:24,0:24:72.25:0,72,1174	0/0:18,0:18:54.18:0,54,871	0/0:13,0:13:39.12:0,39,614	0/0:28,0:28:84.27:0,84,1345	0/0:34,0:34:99:0,102,1583	1/1:1,21:22:66.21:1202,66,0	1/1:1,25:26:69.24:1277,69,0	1/1:1,22:22:57.60:1065,58,0	0/0:24,0:24:72.25:0,72,1173	1/1:2,0:28:35.28:960,35,0	0/0:23,0:22:69.22:0,69,1100	1/1:0,0:3:9.03:119,9,0
chr10	79951625	.	CG	C	5897.33	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=18.341;DP=736;FS=6.927;HRun=2;HaplotypeScore=134.0729;InbreedingCoeff=0.9991;MQ=75.90;MQ0=0;MQRankSum=-10.881;QD=32.05;ReadPosRankSum=1.439;VQSLOD=3.9908;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,175,2540	0/0:7,0:7:21.07:0,21,314	0/0:23,0:22:53.35:0,53,811	0/0:28,0:28:68.85:0,69,941	0/0:32,0:32:93.32:0,93,1392	0/0:28,0:28:84.26:0,84,1220	0/0:29,0:29:87.28:0,87,1282	0/0:30,0:30:81.26:0,81,1180	0/0:21,0:21:63.21:0,63,939	0/0:30,0:30:84.28:0,84,1258	0/0:20,0:20:60.20:0,60,889	1/1:5,11:16:39.13:498,39,0	1/1:1,28:29:78.25:1011,78,0	1/1:2,28:30:81.26:1045,81,0	0/0:26,0:26:72.23:0,72,1045	0/0:26,0:26:78.26:0,78,1168	0/0:33,0:33:99:0,99,1481	0/0:22,0:22:66.22:0,66,989	0/0:28,0:28:81.23:0,81,1135	0/0:20,0:20:60.20:0,60,898	0/0:51,0:51:99:0,153,2250	1/1:2,21:23:63.20:778,63,0	1/1:1,20:21:57.18:717,57,0	1/1:2,24:26:42.14:540,42,0	0/0:21,0:21:57.19:0,57,851	1/1:4,23:27:27.25:843,27,0	0/0:18,0:18:54.18:0,54,807	1/1:0,12:12:36.12:465,36,0
chr10	79951998	.	GGT	G	594.54	PASS	AB=0.977;AC=6;AF=0.107;AN=56;BaseQRankSum=4.381;DP=719;FS=0.742;HRun=0;HaplotypeScore=129.4767;InbreedingCoeff=0.5121;MQ=59.58;MQ0=7;MQRankSum=-1.984;QD=7.82;ReadPosRankSum=1.317;VQSLOD=3.3929;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,1:36:22.34:0,22,886	0/0:13,0:13:39.12:0,39,615	0/0:29,0:18:40.99:0,41,621	0/0:24,0:14:18.97:0,19,433	0/0:35,0:35:93.28:0,93,1480	0/0:29,0:29:60.20:0,60,985	0/0:24,0:24:54.18:0,54,876	0/0:34,0:33:78.24:0,78,1215	0/0:28,0:28:41.59:0,42,1070	0/0:37,0:37:99:0,99,1599	0/0:16,0:16:14.76:0,15,615	0/0:27,0:26:33.08:0,33,520	0/0:32,0:31:42.10:0,42,647	0/0:26,0:25:35.84:0,36,505	0/0:29,0:29:72.23:0,72,1167	0/0:29,0:29:81.28:0,81,1339	0/0:18,1:19:4.75:0,5,603	0/0:28,0:28:75.26:0,75,1225	0/0:30,0:30:78.22:0,78,1215	0/0:17,0:17:45.15:0,45,739	0/0:30,0:30:69.22:0,69,1118	0/0:23,0:22:29.84:0,30,458	0/1:20,1:20:19.61:20,0,168	0/1:21,0:20:12.57:13,0,282	0/0:24,0:24:57.18:0,57,919	1/1:10,15:19:54.17:665,54,0	0/0:24,0:24:57.16:0,57,873	1/1:9,0:9:2.98:21,3,0
chr10	79952019	.	A	ATG	1323.75	PASS	AB=0.870;AC=17;AF=0.315;AN=54;BaseQRankSum=6.720;DP=807;FS=3.887;HRun=0;HaplotypeScore=142.7940;InbreedingCoeff=0.6205;MQ=53.02;MQ0=25;MQRankSum=-0.636;QD=4.28;ReadPosRankSum=-0.055;VQSLOD=2.9501;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,2:40:1.85:338,2,0	0/0:15,0:15:33.09:0,33,380	0/0:44,0:12:5.93:0,6,52	0/1:50,0:16:3.39:3,0,121	0/0:33,0:36:86.80:0,87,942	0/1:9,18:28:73.93:472,0,74	0/0:23,0:23:30.17:0,30,433	0/0:35,0:34:37.52:0,38,388	0/0:27,0:27:54.15:0,54,620	0/0:37,1:37:23.54:0,24,655	0/0:15,0:15:27.07:0,27,299	1/1:36,0:34:16.10:107,16,0	1/1:34,0:33:9.58:74,10,0	1/1:22,0:21:12.91:68,13,0	0/0:32,0:32:75.22:0,75,873	0/0:39,0:39:73.60:0,74,1094	0/0:24,0:23:6.20:0,6,464	0/0:30,0:31:51.62:0,52,676	0/0:29,0:27:35.81:0,36,381	0/0:15,0:15:23.90:0,24,259	0/0:44,0:44:74.81:0,75,841	1/1:28,0:26:8.86:105,9,0	1/1:17,0:16:4.47:36,4,0	1/1:24,0:23:5.19:20,5,0	0/0:26,0:27:59.76:0,60,653	0/1:27,0:21:19.30:276,0,19	0/0:19,0:19:33.10:0,33,385	./.
chr10	79952026	.	T	TGTGTGTGTGTGTGT	2812.19	PASS	AB=1.000;AC=19;AF=0.352;AN=54;BaseQRankSum=6.488;DP=826;FS=1.031;HRun=0;HaplotypeScore=291.4191;InbreedingCoeff=0.4498;MQ=53.51;MQ0=30;MQRankSum=-2.801;QD=6.83;ReadPosRankSum=-6.437;VQSLOD=0.7570;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:25.06:0,25,369	0/0:14,0:14:32.78:0,33,997	0/1:56,0:15:19.47:41,0,19	0/1:57,0:16:18.48:18,0,67	0/0:39,0:39:79.20:0,79,2584	0/0:29,0:29:24.47:0,24,942	0/1:23,0:23:12.78:13,0,772	0/1:32,0:31:15.41:15,0,484	0/0:28,0:28:54.14:0,54,1591	0/0:39,0:36:54.12:0,54,1924	0/0:15,0:15:26.29:0,26,812	1/1:34,0:32:27.51:649,28,0	1/1:36,0:35:23.85:447,24,0	1/1:24,0:22:21.03:513,21,0	0/0:34,0:34:75.16:0,75,2048	0/0:40,0:40:99:0,100,2957	0/1:23,0:22:4.88:5,0,1068	0/1:30,0:29:5.47:5,0,1885	0/0:27,0:24:25.46:0,25,867	0/0:18,0:17:23.81:0,24,855	0/0:46,0:46:59.29:0,59,1856	1/1:28,0:26:30.12:669,30,0	1/1:9,7:18:8.30:246,8,0	1/1:24,0:23:11.98:310,12,0	0/0:26,0:26:60.08:0,60,1646	0/1:26,0:22:70.39:70,0,346	0/0:18,0:18:33.11:0,33,987	./.
chr10	79952040	.	T	TGA	647.76	PASS	AB=0.927;AC=4;AF=0.074;AN=54;BaseQRankSum=9.527;DP=831;FS=2.911;HRun=0;HaplotypeScore=152.9840;InbreedingCoeff=-0.0713;MQ=58.47;MQ0=27;MQRankSum=-2.314;QD=6.05;ReadPosRankSum=2.632;VQSLOD=3.1244;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:38:14.84:15,0,151	0/0:14,0:14:42.04:0,42,566	0/0:57,0:23:52.43:0,52,583	0/0:62,0:27:62.23:0,62,724	0/0:39,0:39:99:0,111,1461	0/1:30,0:30:99:187,0,242	0/0:23,0:23:64.98:0,65,785	0/0:27,0:26:71.15:0,71,834	0/0:32,0:32:83.33:0,83,1042	0/0:35,0:32:68.07:0,68,1089	0/0:16,0:16:45.05:0,45,555	0/0:35,0:33:29.61:0,30,245	0/0:38,0:37:26.91:0,27,255	0/0:22,0:20:15.89:0,16,190	0/0:36,0:36:99:0,102,1366	0/0:41,0:41:99:0,106,1570	0/0:28,0:27:45.27:0,45,762	0/0:27,0:26:53.25:0,53,933	0/0:24,0:21:60.06:0,60,738	0/0:15,0:14:36.03:0,36,438	0/0:45,0:45:99:0,109,1394	0/0:34,0:32:28.48:0,28,252	0/1:17,0:16:0.35:0,0,106	0/0:24,0:23:10.84:0,11,128	0/0:31,0:31:75.14:0,75,1008	0/1:14,8:21:90.38:543,0,90	0/0:18,0:18:51.06:0,51,647	./.
chr10	79952044	.	G	GTGTGTGTGTGT	2030.69	PASS	AB=0.931;AC=11;AF=0.196;AN=56;BaseQRankSum=10.778;DP=798;FS=2.231;HRun=0;HaplotypeScore=257.9981;InbreedingCoeff=0.3822;MQ=61.35;MQ0=25;MQRankSum=-1.090;QD=10.98;ReadPosRankSum=-3.008;VQSLOD=2.2428;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:48.94:0,49,700	0/0:16,0:16:44.35:0,44,1328	0/0:59,0:26:56.48:0,56,939	0/0:60,0:27:64.40:0,64,1178	0/0:37,0:37:99:0,111,3364	0/0:29,0:29:69.11:0,69,1430	0/0:21,0:21:50.84:0,51,1404	0/0:25,0:24:68.56:0,69,1550	0/0:30,0:30:87.19:0,87,2247	0/0:31,0:29:87.23:0,87,2504	0/0:16,0:16:47.16:0,47,1174	1/1:36,1:35:7.59:478,8,0	0/1:35,1:35:28.61:454,0,29	0/1:22,0:21:11.12:320,0,11	0/0:39,0:39:99:0,111,3113	0/0:39,0:39:99:0,117,3679	0/0:26,0:25:75.12:0,75,1772	0/0:26,0:25:56.27:0,56,2228	0/0:23,0:20:59.37:0,59,1445	0/0:15,0:14:42.05:0,42,1100	0/0:41,0:41:84.11:0,84,3050	0/1:28,1:29:7.90:395,0,8	0/1:10,1:12:15.88:158,0,16	1/1:21,0:21:8.42:281,8,0	0/0:28,0:28:81.23:0,81,2267	0/1:22,0:20:10.56:11,0,493	0/0:17,0:17:50.93:0,51,1367	1/1:1,0:1:3.01:84,3,0
chr10	79952351	.	T	TGC	624.20	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.404;DP=686;FS=14.980;HRun=0;HaplotypeScore=94.0067;InbreedingCoeff=0.8246;MQ=89.79;MQ0=0;MQRankSum=-6.433;QD=31.21;ReadPosRankSum=2.024;VQSLOD=5.1123;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,2319	0/0:12,0:12:36.12:0,36,587	0/0:38,0:38:97.54:0,98,1485	0/0:17,0:17:51.17:0,51,778	0/0:25,0:25:72.23:0,72,1148	0/0:31,0:31:84.29:0,84,1371	0/0:23,0:23:69.24:0,69,1122	0/0:32,0:32:96.32:0,96,1544	0/0:26,0:26:78.27:0,78,1273	0/0:26,0:26:78.22:0,78,1239	0/0:15,0:15:45.14:0,45,696	0/0:24,0:24:69.21:0,69,1077	0/0:30,0:30:90.27:0,90,1438	0/0:28,0:28:84.27:0,84,1343	0/0:30,0:30:81.28:0,81,1321	0/0:30,0:30:90.29:0,90,1441	0/0:15,0:15:45.11:0,45,683	0/0:16,0:16:42.14:0,42,685	0/0:21,0:21:60.20:0,60,978	0/0:25,0:25:72.25:0,72,1171	0/0:37,0:37:99:0,108,1756	0/0:28,0:28:72.25:0,72,1167	0/0:17,0:17:48.12:0,48,752	0/0:26,0:26:75.25:0,75,1198	0/0:22,0:22:66.17:0,66,1024	1/1:2,17:18:5.20:677,5,0	0/0:23,0:23:69.24:0,69,1120	1/1:0,1:1:3.01:44,3,0
chr10	79952352	.	T	TACAGTG	1865.81	PASS	AB=0.595;AC=3;AF=0.054;AN=56;BaseQRankSum=8.634;DP=691;FS=18.887;HRun=0;HaplotypeScore=154.4039;InbreedingCoeff=0.6793;MQ=88.99;MQ0=0;MQRankSum=-7.001;QD=71.76;ReadPosRankSum=0.480;VQSLOD=2.9099;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,147,3441	0/0:12,0:12:36.12:0,36,883	0/0:37,0:37:79.29:0,79,2013	0/0:17,0:17:45.13:0,45,972	0/0:26,0:26:75.21:0,75,1675	0/0:31,0:31:93.26:0,93,2064	0/0:23,0:23:66.23:0,66,1590	0/0:31,0:31:93.32:0,93,2214	0/0:26,0:26:78.25:0,78,1865	0/0:26,0:26:75.26:0,75,1834	0/0:16,0:16:45.12:0,45,979	0/0:24,0:24:66.19:0,66,1474	0/0:30,0:30:90.25:0,90,2107	0/0:27,0:27:81.28:0,81,1982	0/0:30,0:30:90.27:0,90,2047	0/0:29,0:29:87.28:0,87,2063	0/0:15,0:15:42.12:0,42,984	0/0:16,0:16:48.10:0,48,1077	0/0:22,0:22:63.22:0,63,1531	0/0:25,0:25:72.23:0,72,1693	0/0:37,0:37:99:0,105,2491	0/0:28,0:28:78.24:0,78,1724	0/0:17,0:17:51.09:0,51,1119	0/0:25,0:25:72.22:0,72,1702	0/0:23,0:23:66.14:0,66,1457	0/1:8,16:24:1.71:1865,0,2	0/0:23,0:23:69.24:0,69,1650	1/1:0,1:1:3.01:93,3,0
chr10	79952386	.	C	CTTT	1432.75	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.699;DP=680;FS=9.428;HRun=7;HaplotypeScore=102.7292;InbreedingCoeff=0.9414;MQ=81.24;MQ0=0;MQRankSum=-7.950;QD=40.94;ReadPosRankSum=-1.498;VQSLOD=2.2718;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,105,1417	0/0:7,0:7:21.04:0,21,263	0/0:21,0:21:56.80:0,57,727	0/0:19,0:19:51.09:0,51,649	0/0:35,0:35:99:0,99,1351	0/0:33,0:33:90.29:0,90,1228	0/0:22,0:22:60.18:0,60,801	0/0:25,0:25:60.17:0,60,804	0/0:15,0:15:45.15:0,45,613	0/0:26,0:27:75.17:0,75,999	0/0:22,0:22:60.16:0,60,788	0/0:22,0:22:60.19:0,60,818	0/0:28,0:28:84.28:0,84,1146	0/0:28,0:28:78.24:0,78,1047	0/0:34,0:34:99:0,99,1335	0/0:31,0:31:93.31:0,93,1267	0/0:18,0:18:48.15:0,48,655	0/0:17,0:17:45.10:0,45,593	0/0:24,0:24:57.17:0,57,778	0/0:27,0:27:75.22:0,75,1007	0/0:31,0:31:87.26:0,87,1169	0/0:29,0:29:81.27:0,81,1105	0/0:22,0:22:51.15:0,51,696	0/0:25,0:25:69.22:0,69,940	0/0:20,0:20:57.18:0,57,777	1/1:9,21:31:37.30:1443,37,0	0/0:24,0:24:72.24:0,72,983	1/1:2,2:4:6.02:101,6,0
chr10	79953579	.	CGTT	C	2351.80	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.609;DP=638;FS=7.585;HRun=0;HaplotypeScore=110.7940;InbreedingCoeff=0.9075;MQ=81.18;MQ0=0;MQRankSum=-13.105;QD=20.10;ReadPosRankSum=1.166;VQSLOD=3.2525;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:24.08:0,24,540	0/0:11,0:11:33.11:0,33,748	0/0:21,0:21:57.20:0,57,1270	0/0:16,0:16:35.67:0,36,634	0/0:37,0:37:99:0,105,2286	0/0:29,0:29:84.23:0,84,1812	0/0:17,0:17:48.16:0,48,1033	0/0:26,0:26:75.24:0,75,1593	0/0:21,0:21:60.19:0,60,1275	0/0:23,0:23:69.22:0,69,1500	0/0:30,0:30:90.30:0,90,1938	1/1:3,10:13:15.52:302,16,0	1/1:3,19:22:44.23:582,44,0	1/1:6,22:28:61.66:692,62,0	0/0:27,0:27:75.24:0,75,1579	0/0:23,0:23:69.23:0,69,1505	0/0:18,0:18:48.16:0,48,1065	0/0:13,0:13:33.11:0,33,725	0/0:18,0:18:51.16:0,51,1090	0/0:37,0:37:99:0,108,2407	0/0:23,0:23:63.22:0,63,1402	1/1:7,14:21:1.38:394,1,0	1/1:6,15:21:3.38:427,3,0	1/1:3,9:12:12.02:124,12,0	0/0:24,0:24:69.22:0,69,1484	0/0:33,0:33:93.31:0,93,2061	0/0:46,0:46:99:0,129,2802	0/0:18,0:18:54.19:0,54,1202
chr10	79953587	.	TG	T	1860.73	PASS	AB=0.588;AC=11;AF=0.196;AN=56;BaseQRankSum=15.098;DP=645;FS=4.378;HRun=1;HaplotypeScore=91.0033;InbreedingCoeff=0.8557;MQ=85.57;MQ0=0;MQRankSum=-12.716;QD=16.04;ReadPosRankSum=1.499;VQSLOD=3.9284;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:27.09:0,27,429	0/0:12,0:12:36.12:0,36,575	0/0:30,0:30:90.25:0,90,1369	0/0:16,0:16:22.39:0,22,558	0/0:35,0:35:99:0,105,1655	0/0:30,0:30:90.31:0,90,1439	0/0:16,0:16:48.16:0,48,767	0/0:25,0:25:75.25:0,75,1176	0/0:19,0:19:57.18:0,57,888	0/0:24,0:24:72.25:0,72,1149	0/0:30,0:30:90.31:0,90,1431	1/1:4,10:14:5.32:232,5,0	1/1:6,19:25:40.81:491,41,0	1/1:3,23:26:68.03:524,68,0	0/0:29,0:29:87.28:0,87,1363	0/0:26,0:26:78.25:0,78,1218	0/0:17,0:17:51.15:0,51,790	0/0:12,0:12:36.09:0,36,549	0/0:17,0:17:48.16:0,48,767	0/0:40,0:40:99:0,120,1868	0/0:20,0:20:60.20:0,60,954	0/1:6,14:20:18.45:293,0,18	1/1:2,18:20:25.88:357,26,0	1/1:2,9:11:14.96:136,15,0	0/0:23,0:23:66.22:0,66,1053	0/0:34,0:34:99:0,99,1558	0/0:44,0:44:99:0,132,2082	0/0:20,0:20:60.20:0,60,959
chr10	79953909	.	C	CT	694.73	PASS	AB=0.846;AC=14;AF=0.250;AN=56;BaseQRankSum=0.041;DP=524;FS=2.911;HRun=13;HaplotypeScore=76.6230;InbreedingCoeff=0.5542;MQ=70.94;MQ0=3;MQRankSum=0.762;QD=4.54;ReadPosRankSum=-2.161;VQSLOD=1.4392;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:17:22.39:0,22,66	0/0:6,0:6:8.85:0,9,62	0/0:12,0:9:17.71:0,18,115	0/1:12,0:14:11.80:12,0,16	0/1:16,6:22:1.24:1,0,138	0/0:4,0:26:36.64:0,37,107	0/0:15,0:15:23.67:0,24,164	0/0:28,0:29:15.73:0,16,227	0/0:22,0:22:18.28:0,18,260	0/0:23,0:23:28.88:0,29,203	0/0:18,0:19:10.83:0,11,152	1/1:5,11:16:17.97:158,18,0	0/1:7,14:21:8.57:72,0,9	1/1:4,8:12:6.01:56,6,0	0/0:12,0:13:28.77:0,29,191	0/0:22,1:24:18.67:0,19,264	0/0:31,0:31:59.36:0,59,417	0/0:22,0:22:23.58:0,24,164	0/0:19,0:20:19.80:0,20,129	0/0:30,0:31:0.22:0,0,138	0/0:11,0:11:17.70:0,18,118	1/1:5,12:17:6.82:186,7,0	1/1:4,12:16:12.01:112,12,0	1/1:3,12:15:24.03:223,24,0	0/1:19,0:19:44.83:45,0,131	0/0:5,0:17:21.69:0,22,73	0/0:19,2:22:13.01:0,13,225	0/0:1,0:8:14.25:0,14,42
chr10	79954028	.	C	CT	992.55	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-1.879;DP=600;FS=1.844;HRun=10;HaplotypeScore=65.3819;InbreedingCoeff=0.9481;MQ=69.28;MQ0=0;MQRankSum=-1.582;QD=16.82;ReadPosRankSum=-0.749;VQSLOD=3.9454;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:20:36.83:183,37,0	0/0:8,0:8:23.97:0,24,197	0/0:15,0:12:17.35:0,17,139	0/0:15,0:13:15.30:0,15,174	0/0:28,0:29:73.90:0,74,593	0/0:27,0:27:71.90:0,72,590	0/0:12,1:13:6.97:0,7,264	0/0:25,0:25:46.16:0,46,372	0/0:19,0:19:38.92:0,39,317	0/0:34,0:34:71.87:0,72,589	0/0:25,1:28:46.99:0,47,571	0/0:24,0:24:47.84:0,48,386	0/0:26,0:28:72.95:0,73,573	0/0:15,0:15:32.95:0,33,271	0/0:13,0:13:11.81:0,12,247	0/0:19,0:19:44.92:0,45,366	0/0:25,0:28:66.98:0,67,529	0/0:19,0:19:41.94:0,42,345	0/0:20,0:20:50.88:0,51,409	0/0:40,1:41:69.86:0,70,778	0/0:14,0:14:23.96:0,24,197	0/0:21,0:23:54.14:0,54,470	0/0:13,0:13:25.22:0,25,185	0/0:18,0:18:53.94:0,54,443	0/0:27,0:27:50.18:0,50,520	1/1:3,24:27:63.15:665,63,0	0/0:25,0:26:67.94:0,68,548	1/1:3,9:12:27.07:287,27,0
chr10	79954132	.	GT	G	992.21	PASS	AB=0.577;AC=5;AF=0.089;AN=56;BaseQRankSum=6.505;DP=557;FS=6.148;HRun=7;HaplotypeScore=55.7199;InbreedingCoeff=0.8106;MQ=86.79;MQ0=0;MQRankSum=-3.846;QD=22.55;ReadPosRankSum=0.469;VQSLOD=3.5745;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:75.07:751,75,0	0/0:6,0:6:15.05:0,15,188	0/0:24,0:24:63.13:0,63,742	0/0:17,0:17:36.09:0,36,421	0/0:31,0:31:75.23:0,75,932	0/0:24,0:24:69.21:0,69,855	0/0:13,0:13:39.12:0,39,491	0/0:29,0:29:81.23:0,81,975	0/0:18,0:18:48.15:0,48,603	0/0:25,0:25:75.23:0,75,934	0/0:16,0:16:42.09:0,42,508	0/0:27,0:27:78.25:0,78,981	0/0:18,0:18:48.60:0,49,578	0/0:19,0:19:48.15:0,48,603	0/0:17,0:17:45.14:0,45,566	0/0:25,0:25:72.21:0,72,882	0/0:13,0:13:36.12:0,36,453	0/0:30,0:30:87.26:0,87,1079	0/0:20,0:21:63.17:0,63,776	0/0:24,0:24:66.15:0,66,787	0/0:9,0:9:27.09:0,27,340	0/0:16,0:16:48.15:0,48,604	0/0:21,0:21:54.16:0,54,665	0/0:20,0:20:51.16:0,51,642	0/0:23,0:23:57.18:0,57,714	0/1:4,11:15:4.67:273,0,5	0/0:27,0:27:66.18:0,66,792	1/1:0,3:3:9.02:92,9,0
chr10	79954718	.	CT	C	3141.95	PASS	AB=0.911;AC=22;AF=0.393;AN=56;BaseQRankSum=13.922;DP=536;FS=4.983;HRun=10;HaplotypeScore=71.1371;InbreedingCoeff=0.7303;MQ=76.74;MQ0=1;MQRankSum=-0.925;QD=12.42;ReadPosRankSum=2.099;VQSLOD=3.5858;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,25:31:65.97:573,66,0	0/1:5,1:6:11.01:11,0,118	0/1:26,2:23:6.37:6,0,331	0/1:18,2:16:18.64:19,0,196	0/0:14,0:14:39.10:0,39,424	1/1:2,0:27:48.89:144,49,0	0/0:14,0:14:33.09:0,33,365	0/0:28,0:30:24.09:0,24,500	0/0:13,1:14:10.04:0,10,339	0/0:17,0:17:45.12:0,45,498	0/1:16,1:17:3.86:4,0,384	1/1:3,15:18:38.98:339,39,0	1/1:2,26:28:68.98:599,69,0	1/1:2,7:9:17.98:156,18,0	0/0:23,1:24:34.11:0,34,604	0/0:22,0:22:63.16:0,63,688	0/0:26,0:26:69.17:0,69,752	0/0:14,0:14:39.11:0,39,431	0/0:18,1:19:22.07:0,22,472	0/0:18,0:18:51.14:0,51,564	0/0:15,0:15:39.11:0,39,431	1/1:2,12:14:32.99:286,33,0	1/1:0,17:17:41.99:364,42,0	1/1:2,18:20:17.81:383,18,0	1/1:0,18:18:53.99:468,54,0	0/0:20,0:20:48.12:0,48,524	0/0:25,1:27:51.99:0,52,784	0/0:9,0:9:24.06:0,24,264
chr10	79954839	.	CA	C	301.21	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.354;DP=569;FS=2.513;HRun=4;HaplotypeScore=51.9564;InbreedingCoeff=0.8502;MQ=85.15;MQ0=0;MQRankSum=-1.852;QD=23.17;ReadPosRankSum=1.929;VQSLOD=2.6583;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.25:0,96,1270	0/0:13,0:13:39.13:0,39,546	0/0:18,0:18:48.09:0,48,615	0/0:17,0:17:39.60:0,40,527	0/0:21,0:21:63.20:0,63,866	0/0:37,0:37:99:0,111,1553	0/0:11,0:11:33.10:0,33,447	0/0:27,0:27:75.24:0,75,1022	0/0:16,0:16:48.14:0,48,654	0/0:28,0:28:75.22:0,75,1013	0/0:17,0:17:48.11:0,48,631	0/0:20,0:20:60.19:0,60,823	0/0:22,0:22:63.20:0,63,864	0/0:21,0:21:60.20:0,60,840	0/0:25,0:25:72.24:0,72,1007	0/0:17,0:17:48.16:0,48,672	0/0:29,0:28:81.20:0,81,1090	0/0:14,0:14:39.13:0,39,546	0/0:20,0:20:54.17:0,54,741	0/0:23,0:23:66.21:0,66,907	0/0:17,0:17:51.14:0,51,692	0/0:12,0:12:36.11:0,36,487	0/0:21,0:21:54.17:0,54,737	0/0:21,0:21:57.15:0,57,776	1/1:0,13:13:33.10:396,33,0	0/0:20,0:20:54.17:0,54,741	0/0:33,0:33:93.27:0,93,1280	0/0:1,0:1:3.01:0,3,42
chr10	79955717	.	AG	A	5915.02	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.380;DP=692;FS=22.315;HRun=1;HaplotypeScore=71.1831;InbreedingCoeff=0.9939;MQ=82.72;MQ0=0;MQRankSum=-5.584;QD=39.17;ReadPosRankSum=2.439;VQSLOD=3.0129;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1632	0/0:18,0:18:54.18:0,54,863	0/0:18,0:18:48.15:0,48,738	0/0:21,0:21:60.14:0,60,877	0/0:21,0:21:60.18:0,60,934	0/0:24,0:24:69.22:0,69,1076	0/0:27,0:27:81.24:0,81,1244	0/0:40,0:40:99:0,120,1853	0/0:36,0:36:99:0,108,1692	0/0:31,0:31:93.30:0,93,1442	0/0:21,0:21:63.21:0,63,1007	1/1:0,19:19:54.18:755,54,0	1/1:0,27:27:78.26:1090,78,0	1/1:0,22:22:63.21:881,63,0	0/0:47,0:47:99:0,141,2205	0/0:24,0:24:72.25:0,72,1151	0/0:27,0:27:81.25:0,81,1263	0/0:4,0:4:12.04:0,12,184	0/0:21,0:21:63.21:0,63,1005	0/0:27,0:27:81.25:0,81,1267	0/0:27,0:27:81.26:0,81,1254	1/1:0,23:23:63.21:881,63,0	1/1:0,9:9:27.09:378,27,0	1/1:0,21:21:60.20:839,60,0	1/1:0,30:30:78.26:1091,78,0	0/0:23,0:23:69.23:0,69,1082	0/0:40,0:40:99:0,120,1883	0/0:8,0:8:24.08:0,24,383
chr10	79955898	.	G	GTT	8283.66	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-4.784;DP=677;FS=12.268;HRun=5;HaplotypeScore=77.7013;InbreedingCoeff=0.9990;MQ=75.58;MQ0=0;MQRankSum=-1.271;QD=32.36;ReadPosRankSum=3.924;VQSLOD=3.4980;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:24:54.90:195,55,0	0/0:16,0:16:48.15:0,48,611	0/0:15,0:15:36.06:0,36,426	0/0:10,0:10:21.06:0,21,268	0/0:27,0:27:81.21:0,81,988	0/0:21,0:21:60.17:0,60,750	0/0:11,0:11:27.08:0,27,344	0/0:38,0:38:96.27:0,96,1189	0/0:24,0:24:66.19:0,66,827	0/0:38,0:38:99:0,105,1305	0/0:22,0:22:57.18:0,57,726	1/1:2,18:20:51.17:884,51,0	1/1:1,27:29:75.26:1297,75,0	1/1:2,19:21:51.17:892,51,0	0/0:30,0:30:87.25:0,87,1081	0/0:24,0:24:63.18:0,63,787	0/0:24,0:24:60.18:0,60,765	0/0:14,0:14:27.06:0,27,344	0/0:26,0:26:78.24:0,78,982	0/0:39,0:39:99:0,111,1387	0/0:21,0:21:45.13:0,45,574	1/1:3,16:20:42.14:735,42,0	1/1:3,29:32:81.75:1417,82,0	1/1:1,12:13:30.10:524,30,0	1/1:3,42:45:99:1979,114,0	1/1:2,0:35:42.12:237,42,0	0/0:21,0:21:57.17:0,57,713	1/1:1,0:17:34.93:124,35,0
chr10	79956353	.	A	AT	418.34	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.772;DP=498;FS=1.032;HRun=5;HaplotypeScore=47.2057;InbreedingCoeff=0.9264;MQ=70.12;MQ0=0;MQRankSum=-2.074;QD=27.89;ReadPosRankSum=0.494;VQSLOD=3.1971;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:15:39.13:513,39,0	0/0:5,0:5:15.04:0,15,161	0/0:7,0:7:12.91:0,13,131	0/0:12,0:11:12.43:0,12,234	0/0:34,0:34:99:0,99,1055	0/0:17,0:17:42.11:0,42,451	0/0:15,0:15:45.11:0,45,484	0/0:27,0:27:75.18:0,75,805	0/0:20,0:20:54.11:0,54,571	0/0:28,0:28:75.19:0,75,806	0/0:22,0:22:54.13:0,54,580	0/0:19,0:19:51.12:0,51,548	0/0:20,0:20:57.14:0,57,611	0/0:13,0:13:33.08:0,33,353	0/0:17,0:17:42.10:0,42,451	0/0:25,0:25:72.17:0,72,766	0/0:14,0:14:36.09:0,36,387	0/0:24,0:24:53.71:0,54,571	0/0:19,0:19:48.12:0,48,516	0/0:21,0:21:63.14:0,63,669	0/0:12,0:12:33.08:0,33,355	0/0:17,0:17:51.13:0,51,548	0/0:16,0:16:39.10:0,39,419	0/0:11,0:11:27.07:0,27,290	0/0:17,0:17:48.12:0,48,516	0/0:20,0:20:60.15:0,60,645	0/0:24,0:24:66.16:0,66,709	0/0:7,0:7:18.05:0,18,193
chr10	79956770	.	GA	G	2181.37	PASS	AB=0.875;AC=15;AF=0.268;AN=56;BaseQRankSum=13.229;DP=488;FS=4.063;HRun=8;HaplotypeScore=69.8448;InbreedingCoeff=0.8893;MQ=72.65;MQ0=0;MQRankSum=-8.712;QD=22.03;ReadPosRankSum=0.762;VQSLOD=4.0691;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:45:0,45,522	0/1:6,1:7:10.92:11,0,163	0/0:9,0:9:15.87:0,16,189	0/0:18,0:15:24:0,24,263	0/0:29,0:29:75.22:0,75,896	0/0:25,0:25:66.16:0,66,768	0/0:10,0:10:27.08:0,27,326	0/0:27,0:27:69.19:0,69,813	0/0:16,0:16:48.13:0,48,568	0/0:31,0:31:75.05:0,75,875	0/0:23,0:23:69.21:0,69,833	1/1:2,8:10:24.51:232,25,0	1/1:7,15:22:51.53:485,52,0	1/1:0,8:8:24.04:231,24,0	0/0:14,0:14:39.11:0,39,462	0/0:20,0:20:54.10:0,54,614	0/0:19,0:19:48.13:0,48,561	0/0:15,0:15:39.10:0,39,455	0/0:22,0:22:54.15:0,54,641	0/0:31,0:31:90.26:0,90,1075	0/0:11,0:11:24.07:0,24,290	1/1:1,9:10:30.05:289,30,0	1/1:2,19:21:57.56:550,58,0	1/1:0,2:2:6.01:58,6,0	1/1:2,17:19:54.08:521,54,0	0/0:5,0:22:54.89:0,55,312	0/0:20,0:20:57.17:0,57,689	0/0:1,0:8:14.34:0,14,72
chr10	79956796	.	TG	T	3573.86	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.681;DP=513;FS=6.082;HRun=2;HaplotypeScore=67.3776;InbreedingCoeff=0.9773;MQ=71.88;MQ0=0;MQRankSum=-8.917;QD=34.36;ReadPosRankSum=3.083;VQSLOD=4.0841;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.19:0,57,853	0/0:9,0:9:27.09:0,27,405	0/0:11,0:11:30.10:0,30,418	0/0:11,0:9:21.07:0,21,310	0/0:31,0:31:90.30:0,90,1337	0/0:26,0:26:78.26:0,78,1155	0/0:15,0:15:45.14:0,45,653	0/0:36,0:36:99:0,105,1527	0/0:15,0:15:45.15:0,45,674	0/0:27,0:27:75.25:0,75,1119	0/0:22,0:22:66.21:0,66,970	1/1:2,10:12:27.09:350,27,0	1/1:1,20:21:60.19:776,60,0	1/1:0,9:9:27.09:350,27,0	0/0:18,0:18:54.18:0,54,808	0/0:19,0:19:57.18:0,57,834	0/0:17,0:17:51.17:0,51,757	0/0:11,0:11:30.06:0,30,419	0/0:20,0:20:57.18:0,57,834	0/0:40,0:40:99:0,111,1657	0/0:13,0:13:39.13:0,39,585	1/1:0,11:11:33.11:428,33,0	1/1:0,23:23:60.19:776,60,0	1/1:1,4:5:9.03:117,9,0	1/1:1,22:23:60.20:778,60,0	0/0:23,0:23:69.23:0,69,1030	0/0:19,0:19:54.18:0,54,803	0/0:4,0:4:9.03:0,9,135
chr10	79957313	.	C	CA	1601.16	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-4.561;DP=401;FS=8.764;HRun=8;HaplotypeScore=48.7373;InbreedingCoeff=0.9476;MQ=82.66;MQ0=0;MQRankSum=0.668;QD=20.01;ReadPosRankSum=2.079;VQSLOD=3.1848;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.04:0,69,631	0/0:7,0:7:21.01:0,21,192	0/0:11,0:11:19.21:0,19,157	0/0:15,0:13:35.88:0,36,307	0/0:18,0:18:54.03:0,54,494	0/0:23,0:23:60.02:0,60,549	0/0:13,0:13:32.99:0,33,297	0/0:27,0:27:69.03:0,69,632	0/0:14,0:14:27:0,27,247	0/0:10,0:10:24.01:0,24,220	0/0:17,0:17:42.02:0,42,384	1/1:2,10:12:20.78:242,21,0	1/1:1,11:12:27.08:312,27,0	1/1:7,8:15:1.32:237,1,0	0/0:17,0:17:42.01:0,42,384	0/0:8,0:8:18:0,18,165	0/0:18,0:18:45.02:0,45,412	0/0:7,0:7:21.01:0,21,191	0/0:19,0:19:45.01:0,45,412	0/0:12,0:12:36.02:0,36,329	0/0:10,0:10:21.01:0,21,192	1/1:2,8:10:21.02:228,21,0	1/1:2,8:10:23.76:268,24,0	1/1:1,6:7:15.04:173,15,0	1/1:6,8:14:30.05:331,30,0	0/0:21,0:21:51.02:0,51,467	0/0:18,0:17:51.03:0,51,466	0/0:10,0:10:27.01:0,27,247
chr10	79957355	.	A	AAC	1013.74	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=-1.408;DP=441;FS=4.304;HRun=0;HaplotypeScore=63.8934;InbreedingCoeff=0.3798;MQ=81.00;MQ0=0;MQRankSum=-0.340;QD=14.08;ReadPosRankSum=2.955;VQSLOD=3.3118;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:31:61.11:1039,61,0	0/0:7,0:7:21.05:0,21,256	0/0:25,0:20:43.42:0,43,409	0/1:17,0:12:36.66:37,0,143	0/0:23,0:23:65.94:0,66,719	0/0:18,0:18:41.45:0,41,574	0/0:13,0:13:33.10:0,33,366	0/0:33,0:33:88.04:0,88,960	0/0:9,0:9:20.93:0,21,247	0/0:13,0:13:39.09:0,39,454	0/0:13,0:13:38.97:0,39,476	0/0:5,0:5:12.03:0,12,151	0/0:10,0:10:28.24:0,28,275	0/0:11,0:11:32.46:0,32,404	0/0:13,0:13:36.08:0,36,433	0/0:5,0:5:15.04:0,15,192	0/0:16,0:16:47.83:0,48,526	0/0:6,0:6:0.73:0,1,132	0/0:22,0:22:59.81:0,60,614	0/0:22,0:22:63.45:0,63,728	0/0:10,0:10:23.92:0,24,258	0/0:4,0:4:12.04:0,12,164	0/0:15,0:15:41.86:0,42,496	0/0:9,0:9:24.06:0,24,298	0/1:24,0:24:52.91:53,0,137	0/0:23,1:24:23.04:0,23,648	0/0:25,0:24:68.96:0,69,736	0/0:18,0:18:50.90:0,51,550
chr10	79960356	.	CATAT	C	2410.50	PASS	AB=0.583;AC=21;AF=0.420;AN=50;BaseQRankSum=7.889;DP=246;FS=28.367;HRun=0;HaplotypeScore=93.1576;InbreedingCoeff=0.6671;MQ=70.76;MQ0=2;MQRankSum=-6.826;QD=18.54;ReadPosRankSum=5.610;VQSLOD=1.0943;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,2:8:12.02:145,12,0	0/0:2,0:2:6.02:0,6,81	1/1:11,0:8:2.45:13,2,0	0/0:10,0:5:0:0,0,0	0/0:6,0:6:15.05:0,15,224	1/1:7,1:13:21.06:249,21,0	0/0:2,0:2:6.02:0,6,100	0/0:16,0:16:39.12:0,39,642	0/0:6,0:6:9.02:0,9,122	0/0:11,0:11:21.07:0,21,387	0/0:5,0:5:6.02:0,6,98	1/1:5,4:9:15.05:222,15,0	1/1:13,11:24:48.14:636,48,0	1/1:9,3:12:21.06:282,21,0	./.	0/0:3,0:3:5.97:0,6,68	0/0:20,0:20:36.11:0,36,574	0/0:4,0:4:10.78:0,11,138	0/0:4,0:3:3.01:0,3,48	0/0:8,0:8:9:0,9,100	./.	1/1:2,4:6:3.01:43,3,0	1/1:2,13:15:21.07:294,21,0	1/1:4,1:5:2.80:47,3,0	./.	0/1:6,14:21:54.73:518,0,55	0/0:10,0:11:9.90:0,10,123	1/1:4,1:5:12.02:140,12,0
chr10	79960371	.	GTATATATATATATATATATATATATATATA	G	7957.76	PASS	AC=16;AF=0.381;AN=42;BaseQRankSum=7.213;DP=176;FS=0.870;HRun=0;HaplotypeScore=152.2421;InbreedingCoeff=0.6135;MQ=55.25;MQ0=4;MQRankSum=-4.823;QD=103.35;ReadPosRankSum=6.383;VQSLOD=4.3862;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,2:5:6.02:298,6,0	./.	0/0:8,0:5:2.19:0,2,5	0/0:6,0:1:0.47:0,0,1	0/0:4,0:4:6.02:0,6,414	0/0:9,0:10:10.76:0,11,425	./.	0/0:20,0:19:33.11:0,33,1772	./.	0/0:7,0:7:6.02:0,6,431	0/0:2,0:2:3:0,3,26	1/1:3,4:7:12.04:899,12,0	1/1:7,11:18:33.11:2465,33,0	1/1:3,3:6:9.03:673,9,0	./.	./.	0/0:12,0:19:33.11:0,33,2939	0/0:4,0:4:6.02:0,6,361	0/0:2,0:1:3.01:0,3,70	./.	./.	1/1:3,1:4:3.01:224,3,0	1/1:6,7:13:21.07:1559,21,0	0/0:4,1:5:0.47:0,0,1	0/0:2,0:2:3.01:0,3,118	1/1:11,7:18:23.88:1614,24,0	0/0:3,0:3:3.01:0,3,104	1/1:4,1:4:3.01:225,3,0
chr10	79960933	.	A	AAC	4754.11	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=0.085;DP=479;FS=5.359;HRun=0;HaplotypeScore=69.7809;InbreedingCoeff=0.9142;MQ=66.87;MQ0=1;MQRankSum=-1.042;QD=33.01;ReadPosRankSum=1.232;VQSLOD=6.9411;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,10:18:31.51:499,32,0	0/0:4,0:4:12.04:0,12,145	0/0:16,0:14:32.92:0,33,370	0/0:11,0:10:18.05:0,18,213	0/0:23,0:23:66.21:0,66,825	1/1:3,18:21:42.14:693,42,0	0/0:19,0:19:45.14:0,45,563	0/0:43,0:43:98.78:0,99,1181	0/0:23,0:23:54.16:0,54,662	0/0:27,0:27:66.21:0,66,825	0/0:17,0:17:48.15:0,48,600	1/1:4,13:17:30.10:495,30,0	1/1:3,12:16:39.13:644,39,0	1/1:3,8:11:24.08:396,24,0	0/0:19,0:19:48.15:0,48,600	0/0:29,0:28:81.26:0,81,1013	0/0:22,0:22:48.11:0,48,583	0/0:3,0:3:6.02:0,6,75	0/0:12,0:12:30.09:0,30,364	0/0:34,0:34:90.28:0,90,1112	0/0:10,0:10:30.10:0,30,375	1/1:0,5:5:12.04:198,12,0	1/1:3,7:10:17.93:297,18,0	1/1:1,3:4:9.03:148,9,0	1/1:4,12:16:5.34:603,5,0	1/1:7,11:18:1.59:533,2,0	0/0:23,0:23:51.16:0,51,638	1/1:3,5:8:15.05:247,15,0
chr10	79960962	.	C	CATAT	934.68	PASS	AB=0.839;AC=9;AF=0.161;AN=56;BaseQRankSum=7.328;DP=433;FS=3.604;HRun=0;HaplotypeScore=88.8059;InbreedingCoeff=0.5033;MQ=65.84;MQ0=0;MQRankSum=-4.048;QD=14.38;ReadPosRankSum=-0.360;VQSLOD=3.2301;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:10:8.29:49,8,0	0/0:4,0:4:9.03:0,9,155	0/1:9,0:7:12.46:12,0,76	0/1:13,0:10:9.54:10,0,108	0/0:27,0:27:69.22:0,69,1161	0/0:19,0:19:31.84:0,32,359	0/0:16,0:16:42.13:0,42,698	0/0:43,0:43:87.27:0,87,1445	0/0:16,0:16:42.14:0,42,709	0/0:20,0:20:51.17:0,51,859	0/0:23,0:23:57.16:0,57,918	0/0:13,0:13:26.36:0,26,292	0/0:14,0:14:6.08:0,6,281	0/0:6,0:6:11.77:0,12,142	0/0:24,0:24:60.15:0,60,923	0/0:29,0:28:66.23:0,66,1124	0/0:20,0:20:51.10:0,51,790	0/0:3,0:3:9.03:0,9,156	0/0:11,0:11:30.10:0,30,508	0/0:29,0:29:78.27:0,78,1350	0/0:9,0:9:24.06:0,24,389	0/0:3,0:3:9.01:0,9,93	0/0:14,0:14:39.09:0,39,443	0/0:3,0:3:4.18:0,4,67	1/1:8,0:9:11.54:60,12,0	0/1:4,8:14:16.07:681,0,16	0/0:22,0:22:60.17:0,60,946	1/1:6,3:9:14.99:269,15,0
chr10	79961033	.	A	AAC	700.92	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=-0.396;DP=589;FS=2.023;HRun=0;HaplotypeScore=81.5722;InbreedingCoeff=0.4753;MQ=72.92;MQ0=0;MQRankSum=-2.116;QD=12.74;ReadPosRankSum=-0.978;VQSLOD=2.8166;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,19:24:48.23:792,48,0	0/0:4,0:4:9.03:0,9,109	0/1:27,0:23:4.81:5,0,227	0/0:27,0:21:39.59:0,40,467	0/0:24,0:24:51.15:0,51,619	0/0:23,0:23:60.16:0,60,705	0/0:14,0:14:8.12:0,8,339	0/0:38,0:38:84.19:0,84,933	0/0:20,0:20:54.14:0,54,632	0/0:21,0:21:54.08:0,54,589	0/0:26,0:26:60.18:0,60,728	0/0:23,0:23:60.18:0,60,728	0/0:25,0:25:69.21:0,69,837	0/0:17,0:17:45.11:0,45,522	0/0:30,0:32:86.92:0,87,999	0/0:27,0:27:75.07:0,75,835	0/0:24,0:24:45.14:0,45,546	0/1:3,0:3:9.96:10,0,64	0/0:27,0:27:48.04:0,48,547	0/0:25,0:25:54.17:0,54,655	0/0:19,0:20:50.99:0,51,596	0/0:14,0:14:36.11:0,36,437	0/0:16,0:17:44.95:0,45,502	0/0:14,0:14:39.11:0,39,462	0/0:1,0:14:34.09:0,34,168	0/0:23,0:23:60.17:0,60,718	0/0:25,0:25:69.18:0,69,803	0/0:10,0:10:30.09:0,30,364
chr10	79963185	.	G	GAA	6010.11	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=13.994;DP=702;FS=5.773;HRun=8;HaplotypeScore=115.0191;InbreedingCoeff=0.9427;MQ=81.93;MQ0=0;MQRankSum=-7.477;QD=28.89;ReadPosRankSum=-0.547;VQSLOD=4.2145;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:27:72.42:508,72,0	0/0:15,0:15:45.12:0,45,501	0/0:20,0:20:45.09:0,45,491	0/0:22,0:22:51.07:0,51,542	0/0:39,0:39:99:0,99,1076	1/1:4,12:17:39:515,39,0	0/0:14,0:14:33.07:0,33,368	0/0:34,0:34:78.13:0,78,860	0/0:22,0:22:63.13:0,63,683	0/0:36,0:36:96.24:0,96,1070	0/0:29,0:29:69.13:0,69,750	1/1:9,21:30:51.60:779,52,0	1/1:5,15:24:47.73:626,48,0	1/1:1,13:14:42.14:662,42,0	0/0:31,0:31:84.18:0,84,925	0/0:25,0:25:69.17:0,69,760	0/0:21,0:21:54.13:0,54,601	0/0:16,0:16:26.13:0,26,313	0/0:16,0:17:33:0,33,413	0/0:31,0:31:87.17:0,87,943	0/0:22,0:22:54.11:0,54,592	1/1:8,32:41:90.09:1275,90,0	1/1:4,25:29:72.16:1075,72,0	1/1:1,12:15:39.09:567,39,0	0/0:31,0:31:57.58:0,58,424	0/0:34,0:34:73.13:0,73,433	0/0:35,0:35:86.61:0,87,1085	0/1:11,0:11:3.01:3,0,139
chr10	79964387	.	G	GA	1773.87	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.604;DP=546;FS=3.871;HRun=8;HaplotypeScore=51.4994;InbreedingCoeff=0.9523;MQ=74.81;MQ0=0;MQRankSum=-1.741;QD=26.48;ReadPosRankSum=1.463;VQSLOD=4.4519;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,18:24:54.15:614,54,0	0/0:5,0:5:15.01:0,15,137	0/0:12,0:12:15.15:0,15,207	0/0:10,0:8:6.04:0,6,90	0/0:24,0:24:66.04:0,66,604	0/0:23,0:23:60.01:0,60,544	0/0:9,0:9:24.01:0,24,220	0/0:31,0:31:81.04:0,81,741	0/0:21,0:21:63.03:0,63,576	0/0:21,0:21:57.02:0,57,522	0/0:17,0:17:42:0,42,379	0/0:19,0:19:30.06:0,30,467	0/0:29,0:29:78.02:0,78,708	0/0:29,0:29:81:0,81,732	0/0:22,0:22:66.04:0,66,604	0/0:20,0:19:57.02:0,57,522	0/0:19,0:19:51.02:0,51,466	0/0:14,0:14:39.02:0,39,357	0/0:16,0:16:42.02:0,42,384	0/0:21,0:21:57.03:0,57,522	0/0:17,0:17:42.01:0,42,384	0/0:18,0:18:48.03:0,48,439	0/0:15,0:15:36.02:0,36,330	0/0:15,0:15:35.99:0,36,324	0/0:25,0:25:66.03:0,66,604	1/1:2,25:27:75.20:852,75,0	0/0:27,0:27:75.02:0,75,680	1/1:1,15:16:39.12:450,39,0
chr10	79964840	.	CT	C	1616.20	PASS	AB=0.856;AC=13;AF=0.232;AN=56;BaseQRankSum=10.101;DP=536;FS=5.807;HRun=10;HaplotypeScore=54.8747;InbreedingCoeff=0.7255;MQ=73.90;MQ0=0;MQRankSum=-0.172;QD=13.03;ReadPosRankSum=1.669;VQSLOD=3.3012;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:10:23.99:208,24,0	0/0:14,0:14:36.09:0,36,391	0/1:14,1:13:16.10:16,0,181	0/1:10,1:11:2.69:3,0,151	0/0:40,1:42:76.02:0,76,1028	1/1:5,25:30:38.80:566,39,0	0/0:18,0:18:48.13:0,48,531	0/0:37,0:37:87.23:0,87,956	0/0:15,0:15:39.09:0,39,423	0/0:23,0:24:63:0,63,678	0/0:21,0:21:60.12:0,60,633	0/0:20,0:20:51.14:0,51,564	0/0:13,0:13:33.09:0,33,365	0/0:16,2:18:13.03:0,13,362	0/0:25,0:25:40.11:0,40,663	0/0:16,0:16:39.11:0,39,431	0/0:15,0:15:42.11:0,42,464	0/0:18,0:18:51.11:0,51,551	0/0:17,0:17:48.11:0,48,516	0/0:21,0:21:55.02:0,55,591	0/0:5,0:5:15.04:0,15,166	0/0:11,0:11:33.07:0,33,351	0/0:28,1:29:58.16:0,58,862	0/1:3,2:5:14.02:14,0,88	1/1:2,18:20:50.99:443,51,0	1/1:2,16:18:44.98:391,45,0	0/0:31,0:33:83.88:0,84,883	1/1:7,8:15:17.99:156,18,0
chr10	79965967	.	TAC	T	384.28	PASS	AB=0.983;AC=19;AF=0.380;AN=50;BaseQRankSum=2.352;DP=381;FS=0.000;HRun=0;HaplotypeScore=60.7491;InbreedingCoeff=0.0504;MQ=61.98;MQ0=22;MQRankSum=0.319;QD=2.18;ReadPosRankSum=0.267;VQSLOD=1.0956;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,2:19:6.01:62,6,0	0/1:5,0:5:7.02:7,0,88	./.	./.	0/1:17,0:16:38.73:39,0,230	1/1:26,0:25:2.84:14,3,0	0/0:12,0:11:12.04:0,12,175	0/0:17,0:16:2.80:0,3,13	0/1:10,0:10:8.13:8,0,36	0/1:12,1:13:32.23:32,0,41	0/1:12,0:12:35.76:36,0,76	0/0:10,0:8:2.50:0,2,9	0/0:10,0:9:6.58:0,7,36	0/0:11,0:11:12.82:0,13,72	0/1:5,0:5:23.38:27,0,23	0/0:9,0:9:9.03:0,9,114	0/0:20,0:17:9.56:0,10,224	0/0:10,0:10:15.79:0,16,176	0/1:14,0:14:11.84:12,0,189	0/0:15,0:15:15.02:0,15,184	0/1:19,0:17:11.48:11,0,194	./.	0/0:12,0:11:9.38:0,9,48	0/0:9,0:8:5.93:0,6,41	1/1:1,0:4:2.84:14,3,0	1/1:10,0:8:14.89:134,15,0	0/1:15,0:14:41.57:98,0,42	1/1:1,4:5:5.60:43,6,0
chr10	79965998	.	ACACACAACAC	A	331.90	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=2.526;DP=419;FS=3.263;HRun=0;HaplotypeScore=115.0126;InbreedingCoeff=0.0282;MQ=45.41;MQ0=48;MQRankSum=-0.138;QD=2.86;ReadPosRankSum=-1.626;VQSLOD=2.1533;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:26:5.33:0,5,105	0/0:5,0:5:14.72:0,15,383	0/0:4,0:1:3.01:0,3,38	0/0:8,0:2:6.02:0,6,75	0/0:18,0:17:45.15:0,45,1079	1/1:7,14:20:11.60:144,12,0	0/0:15,0:12:27.56:0,28,629	0/0:29,0:20:35.04:0,35,369	0/0:9,0:8:18.53:0,19,451	0/0:13,0:11:27.09:0,27,577	0/0:17,0:18:48.08:0,48,1020	0/1:11,0:7:35.17:66,0,35	0/1:17,0:14:99:121,0,113	0/1:9,0:8:6.55:7,0,225	0/0:9,0:9:21.54:0,22,421	0/0:10,0:9:24.08:0,24,699	0/0:29,0:24:46.33:0,46,1429	0/0:19,0:16:35.36:0,35,977	0/1:15,0:15:11.14:11,0,730	0/0:17,0:16:30.57:0,31,1007	0/0:29,0:20:41.88:0,42,1119	0/0:7,0:6:5.92:0,6,82	0/1:12,0:9:1.89:2,0,255	0/1:15,0:12:32.99:33,0,130	0/0:6,0:5:4.29:0,4,47	0/1:15,0:13:82.29:82,0,198	0/0:13,0:12:27.01:0,27,619	0/0:13,0:11:18.51:0,19,285
chr10	79966000	.	ACACAAC	A	287.04	PASS	AB=0.958;AC=13;AF=0.232;AN=56;BaseQRankSum=3.495;DP=411;FS=10.935;HRun=0;HaplotypeScore=93.1363;InbreedingCoeff=-0.0551;MQ=45.30;MQ0=49;MQRankSum=-0.037;QD=1.50;ReadPosRankSum=-0.613;VQSLOD=0.9054;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,14:26:38.40:43,0,38	0/1:5,0:5:18.49:18,0,236	0/0:3,0:1:3.01:0,3,37	0/0:6,0:2:3.01:0,3,37	0/0:19,0:18:32.72:0,33,649	1/1:21,0:20:2.91:42,3,0	0/0:15,0:12:26.08:0,26,442	0/0:28,0:19:20.40:0,20,163	0/0:9,0:8:13.93:0,14,259	0/0:13,0:11:25.81:0,26,312	0/0:16,0:17:15.86:0,16,501	0/1:10,0:6:1.26:20,0,1	0/1:17,0:14:21.77:22,0,91	0/0:9,0:8:4.18:0,4,135	0/0:9,0:9:2.94:0,3,175	0/0:11,0:10:24.08:0,24,509	0/1:29,0:24:16.52:17,0,872	0/0:18,0:15:5.28:0,5,553	0/1:15,0:15:11.42:11,0,508	0/0:16,0:15:17.92:0,18,511	0/1:29,0:19:20.45:20,0,583	0/0:6,0:5:3:0,3,39	0/0:11,0:8:11.87:0,12,156	0/0:16,0:12:0.68:0,1,113	1/1:6,0:5:5.98:68,6,0	0/1:15,0:13:57.56:146,0,58	0/0:13,0:12:0.57:0,1,268	0/1:12,0:11:22.50:23,0,135
chr10	79966002	.	ACAACACAC	A	336.58	PASS	AB=0.955;AC=11;AF=0.212;AN=52;BaseQRankSum=2.949;DP=405;FS=1.576;HRun=0;HaplotypeScore=106.3312;InbreedingCoeff=0.0964;MQ=45.38;MQ0=48;MQRankSum=0.646;QD=2.31;ReadPosRankSum=-1.809;VQSLOD=2.0323;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:25:23.93:81,0,24	0/0:5,0:5:15.04:0,15,291	./.	./.	0/1:18,0:17:23.66:24,0,774	1/1:21,0:20:5.73:55,6,0	0/0:15,0:12:24.08:0,24,492	0/0:28,0:19:29.72:0,30,437	0/0:9,0:8:18.06:0,18,400	0/0:12,0:10:13.19:0,13,394	0/0:16,0:16:9.03:0,9,809	0/1:10,0:6:2.50:59,0,3	0/1:18,0:15:30.28:30,0,72	0/0:9,0:8:4.67:0,5,100	0/0:9,0:9:18.01:0,18,282	0/0:11,0:10:24.08:0,24,572	0/0:29,0:24:39.93:0,40,1089	0/0:18,0:16:33.56:0,34,806	0/1:15,0:15:9.14:9,0,522	0/0:17,0:16:30.57:0,31,820	0/0:29,0:19:6.64:0,7,845	0/0:6,0:5:3:0,3,35	0/0:11,0:8:14.73:0,15,115	0/0:16,0:12:9.16:0,9,102	1/1:6,0:5:2.84:14,3,0	0/1:8,7:13:99:179,0,186	0/1:12,0:11:25.43:25,0,375	0/0:13,0:11:10.85:0,11,306
chr10	79966003	.	CA	C	496.06	PASS	AB=0.818;AC=17;AF=0.327;AN=52;BaseQRankSum=6.904;DP=403;FS=0.625;HRun=2;HaplotypeScore=70.1683;InbreedingCoeff=0.7043;MQ=45.06;MQ0=51;MQRankSum=0.763;QD=4.35;ReadPosRankSum=0.657;VQSLOD=0.4821;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:24:2.31:0,2,13	0/0:5,0:5:11:0,11,109	./.	./.	0/0:18,0:16:36.71:0,37,394	1/1:19,2:20:2.92:8,3,0	0/0:16,0:13:31.84:0,32,351	0/0:26,0:18:30.01:0,30,518	0/0:9,0:8:14.41:0,14,166	0/0:12,0:10:29.32:0,29,316	0/0:18,0:17:36.28:0,36,428	1/1:9,1:6:8.56:61,9,0	1/1:14,5:15:18.27:109,18,0	1/1:8,1:8:16.43:164,16,0	0/0:8,0:8:9.91:0,10,116	0/0:11,0:10:27.09:0,27,352	0/0:25,4:24:5.31:0,5,592	0/1:14,4:15:98.56:99,0,288	0/0:16,0:16:36.02:0,36,374	0/0:17,0:16:29.04:0,29,337	0/0:29,0:19:31.29:0,31,362	1/1:5,1:5:2.48:28,2,0	1/1:11,0:7:8.76:102,9,0	1/1:14,0:10:10.31:89,10,0	1/1:6,0:5:2.36:8,2,0	0/0:15,0:13:8.87:0,9,187	0/0:12,0:11:21.60:0,22,171	0/0:12,1:11:15.57:0,16,204
chr10	79966004	.	AAC	A	464.35	PASS	AB=0.984;AC=25;AF=0.500;AN=50;BaseQRankSum=4.361;DP=403;FS=1.548;HRun=0;HaplotypeScore=75.3160;InbreedingCoeff=0.1174;MQ=45.06;MQ0=51;MQRankSum=2.122;QD=1.79;ReadPosRankSum=1.648;VQSLOD=1.4754;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:24:4.52:53,5,0	0/1:4,0:4:16.04:40,0,16	./.	./.	0/1:18,0:16:12.27:12,0,145	1/1:21,0:20:2.84:14,3,0	0/0:16,0:13:14.03:0,14,158	0/0:26,0:18:11.68:0,12,77	0/0:9,0:8:14.71:0,15,165	0/0:12,0:10:11.84:0,12,123	0/0:14,3:16:27:0,27,355	1/1:11,0:7:8.64:46,9,0	1/1:19,0:15:16.14:81,16,0	1/1:9,0:8:5.52:29,6,0	0/1:8,0:8:37.92:38,0,71	0/0:11,0:10:15.05:0,15,219	0/0:28,0:23:9.97:0,10,296	0/1:18,0:15:15.80:16,0,121	0/1:16,0:16:49.60:50,0,154	0/1:18,0:17:29.20:29,0,172	0/1:30,0:20:57.32:57,0,182	1/1:6,0:5:2.97:20,3,0	1/1:10,0:7:2.86:23,3,0	1/1:14,0:10:8.68:63,9,0	./.	0/1:15,0:13:38.38:38,0,49	0/1:10,1:11:21.87:22,0,48	0/0:13,0:11:14.34:0,14,120
chr10	79966753	.	C	CTCATAATA	2975.94	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.194;DP=586;FS=9.449;HRun=0;HaplotypeScore=154.5866;InbreedingCoeff=0.9892;MQ=79.90;MQ0=0;MQRankSum=-8.775;QD=96.00;ReadPosRankSum=1.028;VQSLOD=4.3469;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:21.07:759,21,0	0/0:5,0:5:15.05:0,15,439	0/0:17,0:17:51.15:0,51,1283	0/0:17,0:17:45.15:0,45,1288	0/0:41,0:41:99:0,123,3451	0/0:32,0:32:96.32:0,96,2692	0/0:10,0:10:30.09:0,30,786	0/0:39,0:39:99:0,105,2912	0/0:15,0:15:45.15:0,45,1244	0/0:26,0:26:75.26:0,75,2168	0/0:27,0:27:78.27:0,78,2268	0/0:12,0:12:36.11:0,36,956	0/0:19,0:19:57.20:0,57,1613	0/0:15,0:15:45.15:0,45,1282	0/0:17,0:17:51.15:0,51,1326	0/0:19,0:19:57.20:0,57,1617	0/0:13,0:13:36.12:0,36,960	0/0:13,0:13:39.13:0,39,1142	0/0:19,0:19:57.20:0,57,1660	0/0:38,0:38:99:0,114,3277	0/0:23,0:23:69.22:0,69,1917	0/0:23,0:23:69.24:0,69,1986	0/0:25,0:25:69.24:0,69,1937	0/0:12,0:12:36.08:0,36,987	1/1:11,11:22:60.21:2338,60,0	0/0:34,0:34:99:0,102,2929	0/0:32,0:32:96.33:0,96,2732	0/0:12,0:12:36.12:0,36,1055
chr10	79966754	.	T	TCATAATATGGTTG	3408.59	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.837;DP=581;FS=14.615;HRun=0;HaplotypeScore=207.6820;InbreedingCoeff=0.9872;MQ=80.33;MQ0=0;MQRankSum=-6.700;QD=148.20;ReadPosRankSum=1.543;VQSLOD=2.9705;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,5:9:18.06:1070,18,0	0/0:6,0:6:15.05:0,15,629	0/0:17,0:17:51.17:0,51,1813	0/0:17,0:17:45.15:0,45,1782	0/0:41,0:41:99:0,123,4813	0/0:34,0:34:96.33:0,96,3769	0/0:11,0:11:30.10:0,30,1097	0/0:35,0:35:99:0,105,4009	0/0:16,0:16:45.15:0,45,1693	0/0:26,0:26:78.25:0,78,3042	0/0:27,0:27:81.26:0,81,3241	0/0:13,0:13:36.11:0,36,1335	0/0:19,0:19:57.20:0,57,2251	0/0:15,0:15:45.15:0,45,1812	0/0:17,0:17:51.16:0,51,1854	0/0:19,0:19:57.20:0,57,2257	0/0:13,0:13:39.12:0,39,1369	0/0:13,0:13:39.13:0,39,1630	0/0:19,0:19:57.20:0,57,2303	0/0:38,0:38:99:0,114,4568	0/0:23,0:23:69.24:0,69,2708	0/0:23,0:23:69.24:0,69,2815	0/0:25,0:25:72.23:0,72,2719	0/0:12,0:12:36.08:0,36,1398	1/1:14,0:14:39.13:2339,39,0	0/0:34,0:34:99:0,102,4092	0/0:33,0:33:96.33:0,96,3819	0/0:12,0:12:36.12:0,36,1479
chr10	79966755	.	G	GGTTGA	1807.80	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.410;DP=586;FS=2.618;HRun=0;HaplotypeScore=120.7491;InbreedingCoeff=0.8643;MQ=79.33;MQ0=0;MQRankSum=-7.798;QD=58.32;ReadPosRankSum=0.112;VQSLOD=3.9210;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:1.11:260,1,0	0/0:6,0:6:18.05:0,18,361	0/0:17,0:17:51.18:0,51,1118	0/0:16,0:16:45.15:0,45,973	0/0:41,0:41:99:0,117,2524	0/0:34,0:34:99:0,102,2116	0/0:11,0:11:33.09:0,33,650	0/0:36,0:36:99:0,105,2145	0/0:16,0:16:48.12:0,48,937	0/0:26,0:26:78.25:0,78,1631	0/0:27,0:27:81.26:0,81,1739	0/0:12,0:12:30.10:0,30,669	0/0:19,0:19:54.17:0,54,1159	0/0:16,0:16:45.15:0,45,1003	0/0:16,0:16:45.15:0,45,1001	0/0:19,0:19:54.17:0,54,1155	0/0:13,0:13:36.12:0,36,777	0/0:13,0:13:39.13:0,39,870	0/0:18,0:18:54.19:0,54,1181	0/0:38,0:38:99:0,111,2413	0/0:23,0:23:66.23:0,66,1468	0/0:23,0:23:66.23:0,66,1472	0/0:25,0:25:72.25:0,72,1524	0/0:11,0:11:33.11:0,33,736	1/1:8,11:22:60.21:1655,60,0	0/0:34,0:34:99:0,99,2149	0/0:33,0:33:99:0,99,2056	0/0:12,0:12:36.12:0,36,788
chr10	79967543	.	T	TTC	631.47	PASS	AB=0.919;AC=14;AF=0.280;AN=50;BaseQRankSum=-1.337;DP=507;FS=3.192;HRun=0;HaplotypeScore=88.9271;InbreedingCoeff=-0.3031;MQ=66.18;MQ0=7;MQRankSum=0.580;QD=2.53;ReadPosRankSum=-0.632;VQSLOD=1.8936;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,1:29:7.81:0,8,34	0/0:3,0:4:5.75:0,6,44	./.	./.	0/0:21,0:22:5.75:0,6,40	0/0:16,0:19:1.99:0,2,22	0/0:14,0:13:2.84:0,3,14	0/1:28,0:28:0:0,0,0	0/0:17,0:18:17.71:0,18,156	0/1:16,0:16:6.04:6,0,79	0/0:12,0:12:3:0,3,31	0/1:15,7:22:78.12:114,0,78	0/1:20,1:22:26.01:38,0,26	0/1:23,0:23:23.71:86,0,24	0/0:14,0:14:3:0,3,32	0/1:18,7:26:43.06:192,0,43	0/0:18,0:19:17.88:0,18,174	0/1:17,2:22:64.81:65,0,85	0/0:18,0:18:8.76:0,9,76	0/1:12,2:14:26.05:38,0,26	0/0:19,0:18:12.01:0,12,118	0/1:15,3:18:26.03:38,0,26	./.	0/1:14,1:14:17.05:121,0,17	0/1:15,0:16:32.48:44,0,32	1/1:13,0:15:0.29:7,0,0	0/1:11,0:13:11.26:11,0,48	0/0:12,0:15:0.52:0,1,53
chr10	79967586	.	T	TCTCT	369.86	PASS	AB=0.985;AC=19;AF=0.352;AN=54;BaseQRankSum=-1.250;DP=591;FS=5.964;HRun=0;HaplotypeScore=103.2511;InbreedingCoeff=-0.2058;MQ=54.17;MQ0=27;MQRankSum=0.437;QD=0.93;ReadPosRankSum=-3.325;VQSLOD=0.7390;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:8.70:0,9,57	0/0:6,0:6:5.93:0,6,63	1/1:60,0:12:0.89:3,1,0	0/1:81,0:24:0.28:0,0,4	0/0:16,0:16:6.01:0,6,61	0/0:21,0:21:2.48:0,2,50	0/0:16,0:16:2.99:0,3,28	1/1:26,0:25:1.36:4,1,0	0/0:16,0:16:18.01:0,18,240	0/1:20,0:20:6.26:6,0,129	0/0:10,0:10:3.01:0,3,45	0/1:28,0:28:19.86:20,0,121	0/1:13,0:13:6.45:6,0,40	0/1:16,4:21:53.85:216,0,54	0/0:13,0:13:3:0,3,46	0/1:27,0:27:66.41:66,0,72	0/0:18,0:18:18.05:0,18,258	0/1:19,0:19:38.11:38,0,155	0/0:13,0:13:8.94:0,9,110	0/1:13,0:13:6.44:6,0,40	0/0:19,0:18:12.04:0,12,170	0/1:15,0:14:6.44:6,0,40	./.	0/1:20,0:19:31.70:61,0,32	0/1:17,0:17:40.83:41,0,51	1/1:14,0:14:2.84:15,3,0	0/1:10,0:10:10.93:11,0,87	0/1:14,0:12:3.23:3,0,121
chr10	79967667	.	TGTGTGTGTGTGC	T	454.14	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=1.733;DP=692;FS=4.957;HRun=0;HaplotypeScore=253.0187;InbreedingCoeff=0.4489;MQ=57.35;MQ0=12;MQRankSum=-2.277;QD=3.47;ReadPosRankSum=-0.763;VQSLOD=1.5810;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,15:28:12.51:269,13,0	0/0:8,0:8:21.06:0,21,868	0/0:38,0:24:6.02:0,6,100	0/0:38,0:23:10.43:0,10,96	0/0:18,0:18:33.11:0,33,1633	0/0:10,0:10:9.03:0,9,172	0/0:24,0:24:44.17:0,44,1686	0/0:20,0:20:18.06:0,18,473	0/0:24,0:24:45.02:0,45,1840	0/0:24,0:23:42.12:0,42,1609	0/0:20,0:20:33.11:0,33,1409	0/0:32,0:32:19.40:0,19,1082	0/1:24,0:24:17.30:17,0,572	0/1:37,0:37:14.64:15,0,1201	0/0:16,0:16:27.08:0,27,949	0/0:29,0:29:51.17:0,51,2583	0/0:38,0:37:81.01:0,81,3025	0/0:18,0:18:42.50:0,43,1603	0/0:18,0:16:21.05:0,21,950	0/0:26,0:26:42.08:0,42,1916	0/0:58,0:57:99:0,114,4522	0/0:20,0:20:42.14:0,42,1106	0/1:18,0:18:13.34:13,0,218	0/0:27,0:27:26.33:0,26,748	1/1:12,12:24:12.04:274,12,0	0/0:28,0:28:17.15:0,17,889	0/0:12,0:12:24.08:0,24,1099	0/0:15,0:15:39.13:0,39,1024
chr10	79967689	.	TGC	T	105.25	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=10.029;DP=708;FS=6.957;HRun=0;HaplotypeScore=146.0369;InbreedingCoeff=0.2432;MQ=53.51;MQ0=16;MQRankSum=-5.958;QD=0.57;ReadPosRankSum=2.318;VQSLOD=1.7396;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:23.67:0,24,164	0/0:11,0:11:33.07:0,33,532	0/0:33,0:12:17.17:0,17,209	0/0:44,0:15:15.67:0,16,175	0/0:23,0:23:59.96:0,60,875	1/1:1,4:5:9:80,9,0	0/0:27,0:27:51.19:0,51,1193	0/0:25,0:24:62.84:0,63,973	0/0:26,0:26:42.18:0,42,900	0/0:28,0:25:75.11:0,75,1114	0/0:19,0:19:57.10:0,57,911	0/1:32,0:32:11.07:22,0,11	0/1:18,0:18:33.16:33,0,79	0/1:37,0:37:34.74:35,0,193	0/0:11,0:11:33.03:0,33,552	0/0:26,0:26:75.14:0,75,1295	0/0:40,0:39:97.88:0,98,1623	0/0:23,0:23:49.48:0,49,903	0/0:18,0:15:41.73:0,42,537	0/0:22,0:22:60.10:0,60,934	0/0:74,0:73:99:0,191,3242	0/1:20,0:20:4.49:4,0,28	0/0:17,0:17:5.83:0,6,51	0/1:32,0:31:12.87:13,0,38	0/0:18,0:18:26.48:0,26,207	0/1:28,0:28:26.62:27,0,114	0/0:11,0:11:30.10:0,30,572	1/1:14,0:14:8.35:36,8,0
chr10	79967701	.	TGC	T	5318.62	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.072;DP=711;FS=10.778;HRun=0;HaplotypeScore=130.8815;InbreedingCoeff=0.9723;MQ=53.35;MQ0=12;MQRankSum=-2.700;QD=27.56;ReadPosRankSum=5.279;VQSLOD=5.5475;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:12.97:0,13,225	0/0:10,0:10:27.09:0,27,506	0/0:36,0:13:9.48:0,9,368	0/0:47,0:18:21.95:0,22,334	0/0:30,0:30:80.97:0,81,1251	1/1:2,3:5:9:80,9,0	0/0:29,0:29:73.57:0,74,1344	0/0:33,0:32:96.12:0,96,1454	0/0:21,0:21:35.93:0,36,844	0/0:26,0:24:72.19:0,72,1220	0/0:18,0:18:53.15:0,53,858	1/1:0,30:30:63.11:934,63,0	1/1:2,15:17:27.09:398,27,0	1/1:3,31:34:60.20:904,60,0	0/0:15,0:15:42.07:0,42,594	0/0:24,0:24:66.21:0,66,1200	0/0:41,0:40:91.87:0,92,1478	0/0:21,0:21:57.07:0,57,958	0/0:17,0:14:39.01:0,39,617	0/0:20,0:20:53.08:0,53,847	0/0:77,0:76:99:0,201,3361	1/1:2,19:21:45.15:686,45,0	1/1:1,16:17:17.59:245,18,0	1/1:2,29:30:42.10:614,42,0	0/0:17,0:17:12.83:0,13,193	1/1:2,21:23:57.62:841,58,0	0/0:11,0:11:30.09:0,30,523	1/1:2,13:15:42.99:617,43,0
chr10	79967763	.	AGT	A	229.92	PASS	AB=0.881;AC=9;AF=0.161;AN=56;BaseQRankSum=3.970;DP=768;FS=10.058;HRun=0;HaplotypeScore=149.8236;InbreedingCoeff=-0.1963;MQ=52.95;MQ0=13;MQRankSum=0.925;QD=0.81;ReadPosRankSum=1.266;VQSLOD=2.3326;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:8.43:0,8,92	0/1:12,0:12:16.91:17,0,217	0/0:62,0:17:9.03:0,9,120	0/0:54,0:26:29.73:0,30,360	0/0:30,0:30:51.16:0,51,773	0/0:10,0:18:2.39:0,2,14	0/1:22,4:27:54.06:54,0,592	0/0:30,1:31:1.11:0,1,463	0/0:19,0:19:36.11:0,36,538	0/0:22,1:23:4.13:0,4,516	0/0:18,0:19:18.93:0,19,398	0/0:30,0:30:7.32:0,7,40	0/0:19,0:20:6.51:0,7,83	0/1:33,0:32:0.60:1,0,62	0/1:14,5:19:94.81:95,0,471	0/0:18,0:18:36.12:0,36,559	0/1:52,2:53:10.62:11,0,1621	0/1:27,0:30:4.07:4,0,715	0/1:11,1:13:31.49:31,0,102	0/0:19,1:20:12.91:0,13,626	0/1:79,6:85:23.12:23,0,1430	0/0:22,0:22:8.02:0,8,63	0/0:19,0:19:0.69:0,1,2	0/0:26,0:26:7.18:0,7,87	0/0:15,0:16:3.70:0,4,69	0/0:14,0:14:15.86:0,16,190	0/1:5,5:10:99:119,0,118	0/0:6,0:8:9.38:0,9,77
chr10	79968055	.	TAA	T	1048.90	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.702;DP=552;FS=2.204;HRun=10;HaplotypeScore=71.4880;InbreedingCoeff=0.9836;MQ=74.19;MQ0=0;MQRankSum=-4.014;QD=26.89;ReadPosRankSum=1.946;VQSLOD=3.9245;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:57.14:635,57,0	0/0:12,0:12:33.11:0,33,523	0/0:21,1:21:31.37:0,31,366	0/0:10,0:9:26.31:0,26,344	0/0:34,0:34:90.26:0,90,1395	0/0:25,0:25:61.09:0,61,955	0/0:10,0:10:27.09:0,27,429	0/0:19,0:19:50.63:0,51,726	0/0:22,0:22:60.20:0,60,932	0/0:24,0:25:68.71:0,69,1035	0/0:17,0:17:45.15:0,45,714	0/0:15,0:15:42.14:0,42,667	0/0:21,0:21:51.16:0,51,787	0/0:19,0:21:59.68:0,60,894	0/0:15,0:16:44.64:0,45,675	0/0:14,0:15:44.64:0,45,675	0/0:31,0:31:84.29:0,84,1331	0/0:19,0:19:57.19:0,57,904	0/0:20,0:21:57.17:0,57,843	0/0:30,0:32:92.79:0,93,1395	0/0:10,0:10:27.07:0,27,404	0/0:21,0:23:62.13:0,62,860	0/0:18,0:18:51.13:0,51,781	0/0:13,0:14:32.60:0,33,485	1/1:1,17:18:48.13:535,48,0	0/0:4,0:24:50.29:0,50,178	0/0:30,0:29:75.23:0,75,1141	0/0:0,0:6:12.48:0,12,43
chr10	79968326	.	GT	G	12317.64	PASS	AB=0.779;AC=54;AF=0.964;AN=56;BaseQRankSum=-0.650;DP=662;FS=0.810;HRun=3;HaplotypeScore=221.1829;InbreedingCoeff=-0.0375;MQ=77.91;MQ0=0;MQRankSum=-7.424;QD=18.61;ReadPosRankSum=2.310;VQSLOD=4.3028;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,21:28:48.28:276,48,0	1/1:6,2:8:23.79:223,24,0	0/1:12,7:19:70.47:210,0,70	0/1:19,5:24:89.47:89,0,204	1/1:25,10:35:79.93:670,80,0	1/1:3,19:22:60.92:397,61,0	1/1:5,9:14:35.43:233,35,0	1/1:17,9:26:68.21:608,68,0	1/1:16,14:30:82.02:641,82,0	1/1:14,10:24:67.81:598,68,0	1/1:17,2:19:48.83:442,49,0	1/1:4,24:28:63.82:343,64,0	1/1:9,20:29:68.78:494,69,0	1/1:6,21:27:45.05:353,45,0	1/1:22,6:28:76.14:727,76,0	1/1:18,5:23:68.13:678,68,0	1/1:17,4:21:43.60:402,44,0	1/1:9,4:13:35.70:330,36,0	1/1:13,5:18:52.28:521,52,0	1/1:19,11:30:74.96:666,75,0	1/1:34,3:37:99:1010,104,0	1/1:4,20:24:53.12:302,53,0	1/1:1,18:19:37.81:203,38,0	1/1:5,11:16:28.66:193,29,0	1/1:5,31:36:82.12:419,82,0	1/1:8,15:23:51.91:336,52,0	1/1:25,10:35:96.23:822,96,0	1/1:3,3:6:17.49:132,17,0
chr10	79968331	.	C	CA	18513.48	PASS	AB=0.841;AC=54;AF=0.964;AN=56;BaseQRankSum=-0.754;DP=689;FS=1.718;HRun=1;HaplotypeScore=222.0846;InbreedingCoeff=-0.0371;MQ=73.47;MQ0=0;MQRankSum=-7.726;QD=26.87;ReadPosRankSum=1.736;VQSLOD=4.5729;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,26:31:65.14:541,65,0	1/1:6,3:9:26.96:307,27,0	0/1:11,5:16:99:180,0,129	0/1:21,2:23:69.19:69,0,302	1/1:25,12:37:95.52:1091,96,0	1/1:8,18:26:68.28:562,68,0	1/1:6,11:17:50.56:493,51,0	1/1:15,15:30:84.12:1005,84,0	1/1:16,14:30:83.41:821,83,0	1/1:13,10:23:69:771,69,0	1/1:18,2:20:59.81:720,60,0	1/1:5,26:31:85.92:709,86,0	1/1:10,22:32:86.33:836,86,0	1/1:8,21:29:71.91:665,72,0	1/1:22,6:28:80.91:957,81,0	1/1:21,4:25:66.02:772,66,0	1/1:18,4:22:47.90:564,48,0	1/1:11,4:15:36.06:423,36,0	1/1:15,7:22:62.86:793,63,0	1/1:18,12:30:77.71:868,78,0	1/1:30,4:34:99:1240,102,0	1/1:1,20:21:61.48:456,61,0	1/1:2,19:21:58.38:505,58,0	1/1:5,12:17:41.41:401,41,0	1/1:6,31:37:99:861,107,0	1/1:3,15:18:53.82:475,54,0	1/1:24,12:36:99:1167,105,0	1/1:5,4:9:26.91:262,27,0
chr10	79968347	.	CAG	C	8915.51	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=3.843;DP=688;FS=0.625;HRun=0;HaplotypeScore=273.3757;InbreedingCoeff=0.9985;MQ=69.74;MQ0=0;MQRankSum=-13.309;QD=32.90;ReadPosRankSum=2.036;VQSLOD=4.5298;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,22:28:63.16:818,63,0	0/0:9,0:9:24.07:0,24,374	0/0:15,0:15:42.59:0,43,670	0/0:19,0:19:37:0,37,596	0/0:42,0:42:99:0,120,2068	1/1:3,23:26:69.23:915,69,0	0/0:20,0:20:57.12:0,57,895	0/0:36,0:36:99:0,99,1570	0/0:25,0:25:66.23:0,66,1136	0/0:24,0:24:66.23:0,66,1138	0/0:26,0:26:78.27:0,78,1346	1/1:3,26:29:75.25:998,75,0	1/1:5,26:31:75.25:998,75,0	1/1:4,29:33:81.27:1077,81,0	0/0:31,0:31:81.26:0,81,1371	0/0:24,0:24:69.22:0,69,1142	0/0:19,0:19:45.15:0,45,779	0/0:12,0:12:33.11:0,33,571	0/0:22,0:22:60.17:0,60,1004	0/0:28,0:28:78.25:0,78,1314	0/0:35,0:35:96.33:0,96,1657	1/1:0,23:23:63.21:838,63,0	1/1:2,23:25:69.23:918,69,0	1/1:2,15:17:36.12:479,36,0	1/1:9,27:36:78.26:1037,78,0	1/1:1,15:16:45.15:598,45,0	0/0:30,0:30:78.27:0,78,1351	1/1:1,6:7:18.06:239,18,0
chr10	79969716	.	AT	A	2955.61	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.368;DP=565;FS=4.262;HRun=7;HaplotypeScore=64.7730;InbreedingCoeff=0.9857;MQ=72.06;MQ0=0;MQRankSum=0.634;QD=24.63;ReadPosRankSum=1.130;VQSLOD=4.2396;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.18:0,60,741	0/0:6,0:6:18.06:0,18,226	0/0:16,0:15:36.11:0,36,440	0/0:11,0:9:17.32:0,17,176	0/0:36,0:36:93.28:0,93,1147	1/1:0,16:16:45.10:459,45,0	0/0:12,0:12:33.11:0,33,415	0/0:25,0:25:63.19:0,63,781	0/0:11,0:11:30.10:0,30,377	0/0:25,0:25:66.21:0,66,827	0/0:33,0:33:96.31:0,96,1208	1/1:2,16:18:45.10:459,45,0	1/1:0,25:25:72.16:735,72,0	1/1:1,13:14:33.07:336,33,0	0/0:11,0:11:33.11:0,33,415	0/0:16,0:16:42.13:0,42,517	0/0:21,0:21:63.12:0,63,746	0/0:27,0:27:78.19:0,78,948	0/0:16,0:15:48.15:0,48,604	0/0:37,0:37:99:0,111,1361	0/0:9,0:9:27.09:0,27,339	1/1:1,16:17:42.09:429,42,0	1/1:1,24:25:63.04:643,63,0	1/1:1,4:5:9.02:92,9,0	0/0:19,0:19:51.16:0,51,642	0/0:29,0:29:72.23:0,72,906	0/0:30,0:30:87.28:0,87,1093	0/0:31,0:31:81.26:0,81,1019
chr10	79969729	.	T	TTCTC	2392.54	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.529;DP=582;FS=4.122;HRun=0;HaplotypeScore=110.7549;InbreedingCoeff=0.9615;MQ=70.34;MQ0=0;MQRankSum=-1.386;QD=56.97;ReadPosRankSum=2.356;VQSLOD=5.1059;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,17:22:48.16:1245,48,0	0/0:7,0:7:21.07:0,21,372	0/0:15,0:14:35.98:0,36,563	0/0:13,0:11:10.81:0,11,181	0/0:31,0:31:87.28:0,87,1526	0/0:17,0:17:48.16:0,48,857	0/0:14,0:14:42.13:0,42,725	0/0:28,0:28:57.15:0,57,928	0/0:11,0:11:27.09:0,27,485	0/0:24,0:24:66.23:0,66,1185	0/0:34,0:34:93.32:0,93,1660	0/0:17,0:17:45.15:0,45,800	0/0:27,0:27:69.24:0,69,1240	0/0:15,0:15:36.10:0,36,587	0/0:15,0:15:39.13:0,39,701	0/0:16,0:16:45.15:0,45,809	0/0:27,0:27:56.97:0,57,1095	0/0:33,0:34:92.44:0,92,1598	0/0:15,0:15:42.12:0,42,719	0/0:38,0:38:99:0,102,1790	0/0:9,0:9:15.05:0,15,270	0/0:18,0:18:48.16:0,48,830	0/0:26,0:26:69.03:0,69,1201	0/0:7,0:6:15.05:0,15,270	1/1:4,16:20:50.04:1269,50,0	0/0:24,0:24:69.24:0,69,1238	0/0:31,0:31:87.27:0,87,1506	0/0:27,0:27:81.28:0,81,1454
chr10	79970417	.	TAA	T	505.14	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=0.009;DP=247;FS=2.281;HRun=2;HaplotypeScore=75.1553;InbreedingCoeff=0.8006;MQ=57.99;MQ0=1;MQRankSum=-0.772;QD=10.10;ReadPosRankSum=-2.237;VQSLOD=-0.0891;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:12.04:0,12,227	0/0:3,0:3:6.02:0,6,121	0/0:5,0:4:9.92:0,10,172	0/0:4,0:4:12.04:0,12,204	0/0:16,0:16:38.68:0,39,626	1/1:0,13:13:6.02:74,6,0	0/0:4,0:4:11.93:0,12,199	0/0:25,0:25:71.91:0,72,1333	0/0:9,0:9:27.08:0,27,479	0/0:15,0:15:42.14:0,42,819	0/0:7,0:6:17.27:0,17,306	1/1:0,9:9:6.02:75,6,0	1/1:0,14:14:12.04:194,12,0	1/1:2,3:5:15.04:217,15,0	0/0:10,0:10:30:0,30,555	0/0:11,0:11:33.11:0,33,649	0/0:5,0:5:15.05:0,15,280	0/0:3,0:3:6.02:0,6,122	0/0:17,0:17:51.14:0,51,884	0/0:10,0:10:30.10:0,30,577	0/0:4,0:4:12.04:0,12,243	1/1:0,5:5:5.99:65,6,0	./.	1/1:1,3:3:3.01:37,3,0	0/0:12,0:12:36.12:0,36,709	0/0:11,0:11:33.10:0,33,633	0/0:13,0:13:38.34:0,38,734	0/0:5,0:5:15.05:0,15,270
chr10	79970696	.	T	TTATATATATATATATA	584.57	PASS	AB=1.000;AC=10;AF=0.200;AN=50;BaseQRankSum=0.923;DP=207;FS=7.450;HRun=0;HaplotypeScore=84.1318;InbreedingCoeff=0.4972;MQ=77.08;MQ0=4;MQRankSum=-4.006;QD=10.44;ReadPosRankSum=-1.910;VQSLOD=0.3884;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:0,0:3:6.01:0,6,62	./.	0/1:8,0:5:3.18:9,0,3	0/1:24,0:9:4.74:5,0,5	0/0:10,0:10:3.01:0,3,134	1/1:0,0:4:4.52:45,5,0	0/0:4,0:4:12:0,12,414	0/0:41,0:43:36.03:0,36,2994	0/0:4,0:4:9.03:0,9,391	0/0:2,0:2:3.01:0,3,131	0/0:4,0:4:6.02:0,6,252	0/0:3,0:3:6.02:0,6,269	0/0:5,0:5:12.04:0,12,401	0/0:6,0:6:18.06:0,18,782	0/0:7,0:7:12.04:0,12,437	./.	0/0:12,0:12:30.06:0,30,1171	0/0:11,0:11:18.06:0,18,582	0/0:12,0:12:27.09:0,27,941	0/0:3,0:3:3.01:0,3,107	0/0:5,0:5:12.04:0,12,538	0/0:1,0:1:3.01:0,3,134	0/0:4,0:4:6.02:0,6,171	./.	1/1:0,2:4:3.01:230,3,0	1/1:5,0:5:6.02:66,6,0	0/0:10,0:10:16.40:0,16,766	1/1:11,0:11:18.04:364,18,0
chr10	79970701	.	T	TATATATAC	1323.79	PASS	AB=1.000;AC=8;AF=0.160;AN=50;BaseQRankSum=-0.999;DP=208;FS=9.028;HRun=0;HaplotypeScore=53.3444;InbreedingCoeff=0.4628;MQ=82.36;MQ0=4;MQRankSum=-3.808;QD=42.70;ReadPosRankSum=-0.459;VQSLOD=2.0193;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:4:15.08:27,0,15	./.	0/0:9,0:4:5.92:0,6,56	0/0:32,0:13:10.20:0,10,57	0/0:8,0:8:11.99:0,12,154	0/1:4,0:4:10.45:75,0,10	0/0:4,0:4:12.04:0,12,283	0/0:40,0:40:99:0,103,2412	0/0:5,0:5:12.03:0,12,270	0/0:2,0:2:6.01:0,6,108	0/0:2,0:2:6.02:0,6,163	0/0:4,0:4:9.02:0,9,189	0/0:7,0:7:18.01:0,18,355	0/0:7,0:7:21.06:0,21,516	0/0:5,0:5:12.04:0,12,327	./.	0/0:11,0:11:30.10:0,30,774	0/0:10,0:10:18.06:0,18,480	0/0:10,0:10:27.09:0,27,720	0/0:2,0:2:3.01:0,3,82	0/0:5,0:5:12.04:0,12,327	0/0:1,0:1:3.01:0,3,82	0/0:3,0:3:8.95:0,9,153	./.	1/1:3,0:3:3.01:87,3,0	1/1:3,3:9:15.05:559,15,0	0/0:10,0:10:30.09:0,30,674	1/1:6,5:11:18.06:712,18,0
chr10	79971406	.	G	GC	333.79	PASS	AB=1.000;AC=5;AF=0.139;AN=36;BaseQRankSum=2.468;DP=356;FS=4.623;HRun=5;HaplotypeScore=34.8631;InbreedingCoeff=0.5198;MQ=24.48;MQ0=166;MQRankSum=-1.212;QD=8.14;ReadPosRankSum=-0.672;VQSLOD=-0.5900;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,7:2:3.01:39,3,0	0/0:8,0:7:21.05:0,21,225	./.	./.	0/0:22,0:19:21.05:0,21,224	0/0:9,0:5:6.02:0,6,64	0/0:11,0:1:3.01:0,3,32	./.	0/0:13,0:5:3.01:0,3,32	0/0:17,0:15:45.10:0,45,475	0/0:14,0:12:15.04:0,15,161	0/0:13,0:5:0:0,0,0	0/0:16,0:10:15.04:0,15,161	./.	./.	0/0:12,0:4:3:0,3,32	./.	./.	./.	0/0:27,0:27:72.18:0,72,772	./.	0/1:12,0:11:0:0,0,0	0/0:15,0:14:21:0,21,225	./.	1/1:0,17:13:30.10:393,30,0	0/0:18,0:11:33.04:0,33,341	0/0:16,0:9:2.98:0,3,22	0/0:3,0:2:6.02:0,6,64
chr10	79971744	.	G	GTTT	997.69	PASS	AB=0.783;AC=16;AF=0.286;AN=56;BaseQRankSum=0.526;DP=307;FS=11.256;HRun=11;HaplotypeScore=65.0808;InbreedingCoeff=0.7273;MQ=60.38;MQ0=1;MQRankSum=-0.847;QD=15.35;ReadPosRankSum=0.849;VQSLOD=0.5404;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:31.18:0,31,103	0/0:6,0:6:18.05:0,18,210	0/1:9,0:5:4.21:4,0,7	0/0:11,0:8:9.42:0,9,80	0/0:14,0:16:38.96:0,39,408	0/0:11,0:11:17.95:0,18,210	0/0:9,0:10:11.84:0,12,123	0/0:13,0:15:10.71:0,11,343	0/0:14,0:14:33.02:0,33,386	0/0:12,0:14:28.49:0,28,304	0/0:4,0:5:4.52:0,5,52	1/1:1,6:7:12.04:225,12,0	1/1:1,2:4:6.02:113,6,0	1/1:2,8:11:21.05:361,21,0	0/0:11,0:12:26.87:0,27,283	0/0:14,0:14:30:0,30,350	0/0:11,0:11:24.03:0,24,281	0/0:16,0:17:43.56:0,44,505	0/0:13,0:13:26.99:0,27,300	0/0:12,0:15:34.57:0,35,399	0/0:14,0:14:33.02:0,33,386	1/1:0,2:2:3.01:56,3,0	1/1:1,6:7:12.04:225,12,0	1/1:1,2:4:9.03:156,9,0	0/0:9,0:9:12.65:0,13,38	0/1:4,0:17:5.46:23,0,5	0/0:14,0:16:31.56:0,32,383	1/1:1,0:4:3.74:8,4,0
chr10	79971754	.	T	TG	853.25	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=1.859;DP=310;FS=7.324;HRun=0;HaplotypeScore=58.2729;InbreedingCoeff=0.5469;MQ=66.16;MQ0=1;MQRankSum=-3.245;QD=17.78;ReadPosRankSum=2.657;VQSLOD=5.7361;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:48.14:629,48,0	0/0:7,0:7:18.06:0,18,246	0/0:11,0:7:11.69:0,12,81	0/0:13,0:9:17.87:0,18,175	0/0:16,0:16:42.02:0,42,518	0/0:9,0:9:26.96:0,27,304	0/0:8,0:8:20.91:0,21,209	0/0:14,0:14:34.27:0,34,435	0/0:14,0:14:42.01:0,42,509	0/0:13,0:13:29.37:0,29,410	0/0:7,0:7:7.98:0,8,129	0/0:7,0:7:12.82:0,13,55	0/0:3,0:3:4.87:0,5,18	0/0:9,0:9:17.22:0,17,62	0/0:14,0:14:41.88:0,42,446	0/0:12,0:12:33.08:0,33,431	0/0:11,0:11:30.07:0,30,378	0/0:16,0:16:40.72:0,41,613	0/0:16,0:16:48.05:0,48,541	0/0:17,0:17:38.89:0,39,522	0/0:16,0:16:48.08:0,48,579	0/0:2,0:2:2.50:0,2,9	0/0:7,0:7:12.82:0,13,50	0/0:3,0:3:8.63:0,9,45	1/1:4,7:11:29.90:335,30,0	0/1:16,0:16:13.84:14,0,138	0/0:17,0:17:35.07:0,35,500	0/1:4,0:4:5.80:6,0,13
chr10	79971812	.	C	CT	313.93	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.129;DP=255;FS=0.000;HRun=8;HaplotypeScore=44.0971;InbreedingCoeff=0.6750;MQ=66.07;MQ0=0;MQRankSum=-0.912;QD=12.56;ReadPosRankSum=0.022;VQSLOD=2.1355;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,6:9:14.91:153,15,0	0/0:3,0:3:9:0,9,82	1/1:6,0:4:0.47:1,0,0	0/0:12,0:8:3.97:0,4,52	0/0:15,0:15:39.02:0,39,357	0/0:12,0:12:36.02:0,36,329	0/0:5,0:5:9:0,9,82	0/0:13,0:13:30:0,30,275	0/0:10,0:10:18.01:0,18,165	0/0:11,0:11:27.01:0,27,247	0/0:13,0:13:36.02:0,36,329	0/0:7,0:7:15.01:0,15,137	0/0:6,0:6:12:0,12,110	0/0:8,0:8:21.01:0,21,192	0/0:9,0:9:21.01:0,21,192	0/0:9,0:9:24.01:0,24,220	0/0:7,0:7:18.01:0,18,165	0/0:10,0:10:30:0,30,269	0/0:10,0:9:24.01:0,24,220	0/0:15,0:15:39.02:0,39,357	0/0:8,0:8:21.01:0,21,192	0/0:3,0:3:6:0,6,55	0/0:6,0:6:9:0,9,82	0/0:2,0:2:6:0,6,55	1/1:2,8:10:24.07:277,24,0	0/0:19,0:19:48.49:0,48,440	0/0:14,0:14:33.02:0,33,302	0/0:3,0:3:3:0,3,27
chr10	79980871	.	GGTTT	G	326.44	PASS	AC=10;AF=0.357;AN=28;BaseQRankSum=3.000;DP=741;FS=9.132;HRun=0;HaplotypeScore=11.7601;InbreedingCoeff=0.4687;MQ=9.87;MQ0=429;MQRankSum=0.495;QD=4.35;ReadPosRankSum=1.427;VQSLOD=-0.5585;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:3:6.02:0,6,173	0/0:17,0:1:3.01:0,3,86	./.	./.	0/0:16,0:1:3.01:0,3,48	./.	./.	./.	0/0:37,0:6:3.01:0,3,86	0/0:39,0:6:18.06:0,18,521	./.	1/1:17,2:2:6.02:110,6,0	./.	./.	./.	./.	0/0:59,0:2:5.98:0,6,107	./.	0/0:43,0:2:6.02:0,6,172	0/0:13,0:2:3.01:0,3,78	./.	1/1:12,2:2:6.02:103,6,0	1/1:9,2:2:6.02:112,6,0	./.	./.	1/1:20,1:1:3.01:56,3,0	0/0:40,0:3:3.01:0,3,87	1/1:5,5:1:3.01:55,3,0
chr10	79982426	.	GATTCCAA	G	925.53	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.773;DP=493;FS=0.000;HRun=0;HaplotypeScore=112.0536;InbreedingCoeff=0.8054;MQ=79.31;MQ0=0;MQRankSum=-5.904;QD=28.05;ReadPosRankSum=-0.529;VQSLOD=3.2458;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,14:23:30.10:632,30,0	0/0:4,0:4:9.03:0,9,332	0/0:19,0:18:2.06:0,2,66	0/0:21,0:21:17.46:0,17,298	0/0:16,0:16:30.10:0,30,979	0/0:29,0:29:54.19:0,54,1880	0/0:11,0:11:12.04:0,12,443	0/0:28,0:28:42.13:0,42,1082	0/0:18,0:18:33.09:0,33,1051	0/0:17,0:17:27.09:0,27,926	0/0:12,0:12:30.10:0,30,1108	0/0:16,0:16:30.10:0,30,1095	0/0:20,0:20:36.11:0,36,1088	0/0:24,0:24:45.12:0,45,1482	0/0:26,0:26:57.18:0,57,1948	0/0:20,0:20:30.10:0,30,1105	0/0:11,0:11:24.08:0,24,886	0/0:3,0:3:6.02:0,6,221	0/0:21,0:21:24.08:0,24,830	0/0:11,0:11:21.07:0,21,776	0/0:18,0:18:30.10:0,30,969	0/0:20,0:20:30.10:0,30,1108	0/0:21,0:21:36.12:0,36,1196	0/0:9,0:9:15.05:0,15,554	1/1:3,7:10:18.06:412,18,0	0/0:28,0:28:57.20:0,57,2017	0/0:22,0:22:36.12:0,36,1272	0/0:15,0:15:18.06:0,18,643
chr10	79982589	.	G	GTTCTTC	4829.82	PASS	AB=1.000;AC=38;AF=0.704;AN=54;BaseQRankSum=6.152;DP=313;FS=7.663;HRun=0;HaplotypeScore=106.8971;InbreedingCoeff=0.6012;MQ=67.80;MQ0=0;MQRankSum=-6.274;QD=18.51;ReadPosRankSum=-2.434;VQSLOD=3.3183;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:3.47:26,3,0	1/1:14,0:14:18.04:204,18,0	1/1:15,0:12:2.57:22,3,0	./.	1/1:2,9:11:13.85:148,14,0	0/0:10,0:10:4.47:0,4,97	0/0:2,0:2:3.01:0,3,50	0/1:26,0:25:26.60:263,0,27	1/1:8,0:8:24.08:389,24,0	1/1:5,10:15:17.96:308,18,0	1/1:10,0:10:18.05:239,18,0	0/0:5,0:5:6.02:0,6,99	1/1:9,0:9:0.94:2,1,0	0/0:6,0:6:12.04:0,12,174	1/1:10,0:10:24.04:380,24,0	1/1:3,0:3:6.02:132,6,0	0/1:21,0:21:5.77:6,0,643	1/1:8,0:8:21.01:262,21,0	1/1:6,0:11:18.01:236,18,0	1/1:12,0:12:21.03:228,21,0	1/1:10,0:10:5.95:54,6,0	0/0:7,0:7:8.91:0,9,123	0/0:9,0:9:12.04:0,12,196	0/0:5,0:5:3.87:0,4,93	1/1:13,0:13:30.09:425,30,0	1/1:17,0:17:33.10:555,33,0	1/1:13,0:12:27.02:332,27,0	1/1:21,0:21:47.61:618,48,0
chr10	79982616	.	CTTATTATTA	C	838.16	PASS	AB=0.988;AC=10;AF=0.250;AN=40;BaseQRankSum=1.517;DP=242;FS=0.000;HRun=0;HaplotypeScore=123.7240;InbreedingCoeff=-0.1335;MQ=43.36;MQ0=2;MQRankSum=0.512;QD=6.76;ReadPosRankSum=-4.950;VQSLOD=0.5959;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:8:0:0,0,0	./.	./.	./.	0/1:11,0:11:12.74:13,0,73	0/0:5,0:5:2.92:0,3,17	0/0:2,0:2:3.01:0,3,75	1/1:20,9:26:21.70:205,22,0	0/1:9,0:9:12.54:13,0,198	0/1:15,0:14:9.75:10,0,77	0/1:9,0:9:61.08:61,0,61	./.	0/0:3,0:3:3.01:0,3,40	0/0:4,0:4:6.02:0,6,88	0/1:9,0:9:61.93:62,0,88	0/0:2,0:2:3.01:0,3,60	0/0:29,0:29:48.12:0,48,1246	0/1:8,0:9:17.56:65,0,18	0/0:8,0:7:6.02:0,6,120	./.	./.	0/0:5,0:5:3.01:0,3,40	./.	./.	0/0:10,0:10:4.48:0,4,226	0/0:12,0:12:7.74:0,8,101	0/0:9,0:8:9:0,9,130	0/1:25,0:25:99:529,0,145
chr10	79982639	.	TATTATTATTATTATTATTA	T	1538.13	PASS	AB=0.960;AC=6;AF=0.120;AN=50;BaseQRankSum=7.388;DP=163;FS=0.000;HRun=0;HaplotypeScore=130.1587;InbreedingCoeff=0.0632;MQ=40.72;MQ0=2;MQRankSum=-4.970;QD=40.48;ReadPosRankSum=3.007;VQSLOD=2.2140;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:11.95:0,12,126	0/0:3,0:3:8.96:0,9,126	./.	./.	0/0:5,0:5:9.03:0,9,258	0/1:3,0:3:1.88:33,0,2	0/0:2,0:2:6.01:0,6,236	0/0:22,0:18:45.15:0,45,1193	0/0:6,0:6:17.99:0,18,672	0/0:9,0:9:24.05:0,24,726	0/0:7,0:7:12.02:0,12,304	1/1:1,0:1:1.25:3,1,0	0/0:1,0:1:3.01:0,3,78	0/0:2,0:2:6.02:0,6,159	0/0:7,0:7:18.06:0,18,311	0/0:3,0:3:8.96:0,9,331	0/0:24,0:24:69.24:0,69,3256	0/0:12,0:12:33.08:0,33,680	0/0:3,0:3:8.95:0,9,284	0/0:3,0:3:8.86:0,9,87	./.	0/0:1,0:1:3.01:0,3,76	0/0:2,0:2:6.01:0,6,92	0/0:1,0:1:2.99:0,3,24	0/1:9,0:9:77.20:77,0,210	0/1:4,0:4:55.01:55,0,167	0/0:6,0:5:18.06:0,18,579	0/1:17,4:21:99:1477,0,125
chr10	79982645	.	TATTATTATTATTA	T	1049.64	PASS	AB=0.897;AC=3;AF=0.068;AN=44;BaseQRankSum=6.463;DP=143;FS=2.268;HRun=0;HaplotypeScore=106.4724;InbreedingCoeff=-0.0785;MQ=41.10;MQ0=3;MQRankSum=-3.461;QD=33.86;ReadPosRankSum=4.436;VQSLOD=2.2630;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:1.25:0,1,4	0/0:2,0:2:2.94:0,3,18	./.	./.	0/0:5,0:5:9.03:0,9,182	0/0:4,0:4:8.38:0,8,64	0/0:2,0:2:6.02:0,6,191	0/0:19,0:16:44.30:0,44,651	0/0:4,0:4:12.04:0,12,432	0/0:9,0:9:19.45:0,19,443	0/0:6,0:6:8.81:0,9,207	0/0:1,0:1:2.99:0,3,23	0/0:1,0:1:3.01:0,3,79	0/0:2,0:2:6.02:0,6,164	0/0:6,0:6:8.38:0,8,157	0/0:2,0:2:6.02:0,6,210	0/0:22,0:22:66.23:0,66,2430	0/0:11,0:11:26.18:0,26,352	0/0:4,0:3:8.95:0,9,232	./.	./.	0/0:1,0:1:3.01:0,3,78	./.	./.	0/1:9,0:9:3.22:3,0,407	0/1:4,0:4:29.06:29,0,88	0/0:5,0:4:14.89:0,15,284	0/1:10,8:18:64.86:1104,0,65
chr10	79982647	.	T	TA	185.18	PASS	AB=0.767;AC=4;AF=0.095;AN=42;BaseQRankSum=3.014;DP=140;FS=1.234;HRun=1;HaplotypeScore=73.5159;InbreedingCoeff=-0.1764;MQ=41.14;MQ0=4;MQRankSum=-3.267;QD=5.45;ReadPosRankSum=2.305;VQSLOD=0.6729;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:1,2:3:22.33:22,0,23	./.	./.	./.	0/0:4,0:4:6.02:0,6,79	0/0:4,0:4:12.04:0,12,164	0/0:2,0:2:6.02:0,6,77	0/0:20,0:16:45.01:0,45,559	0/0:4,0:4:12.04:0,12,156	0/0:9,0:9:23.85:0,24,306	0/0:6,0:6:12.03:0,12,140	0/0:1,0:1:3.01:0,3,42	0/0:1,0:1:3.01:0,3,42	0/0:2,0:2:6.02:0,6,84	0/0:4,0:4:12.04:0,12,156	0/0:2,0:2:6.02:0,6,84	0/0:24,0:24:66.21:0,66,894	0/0:11,0:11:33.09:0,33,404	0/0:4,0:3:6.02:0,6,87	./.	./.	0/0:1,0:1:3.01:0,3,42	./.	./.	0/1:8,1:9:46.01:46,0,254	0/1:2,2:4:71.45:84,0,71	0/0:5,0:4:9.03:0,9,120	0/1:16,2:18:99:135,0,166
chr10	79982660	.	TACTAC	T	661.62	PASS	AB=1.000;AC=17;AF=0.405;AN=42;BaseQRankSum=7.018;DP=124;FS=21.205;HRun=0;HaplotypeScore=74.0626;InbreedingCoeff=0.5144;MQ=45.08;MQ0=3;MQRankSum=-4.091;QD=16.14;ReadPosRankSum=1.634;VQSLOD=1.0496;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:4,0:2:4.57:0,5,92	0/0:2,0:2:3.01:0,3,42	1/1:5,0:5:8.85:82,9,0	0/0:2,0:2:6.02:0,6,169	0/0:28,0:25:61.76:0,62,1557	0/0:4,0:4:9.03:0,9,194	0/0:7,0:7:2.98:0,3,408	0/0:5,0:5:9.02:0,9,157	1/1:1,0:1:2.96:19,3,0	1/1:1,0:1:2.97:20,3,0	1/1:2,0:2:6.02:78,6,0	0/0:4,0:4:7.79:0,8,127	0/0:2,0:2:6.02:0,6,157	0/0:21,0:21:60.21:0,60,1678	0/1:11,0:11:13.83:14,0,483	0/0:3,0:2:6.02:0,6,104	./.	./.	./.	1/1:1,0:1:2.92:17,3,0	./.	1/1:3,0:3:5.08:32,5,0	1/1:2,0:2:5.80:32,6,0	0/0:1,0:0:3.01:0,3,73	1/1:3,12:15:33.16:513,33,0
chr10	79982842	.	GA	G	2822.12	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=10.323;DP=313;FS=0.523;HRun=8;HaplotypeScore=30.3134;InbreedingCoeff=0.8833;MQ=76.55;MQ0=0;MQRankSum=0.690;QD=20.90;ReadPosRankSum=6.060;VQSLOD=2.5354;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:63.10:608,63,0	0/0:5,0:5:12.04:0,12,145	0/0:10,0:9:23.22:0,23,221	0/1:8,0:5:12.41:12,0,46	0/0:18,0:17:49.66:0,50,567	1/1:1,11:12:27.04:261,27,0	0/0:6,0:6:15.05:0,15,181	0/0:31,0:31:84.21:0,84,987	0/0:7,0:7:18.06:0,18,217	0/0:10,0:10:30.09:0,30,362	0/0:9,0:9:27.07:0,27,314	1/1:2,7:9:21.03:203,21,0	1/1:1,7:8:18.03:174,18,0	1/1:1,5:6:15.02:145,15,0	0/0:9,0:9:18.06:0,18,217	0/0:7,0:7:21.04:0,21,231	0/0:13,0:13:36.11:0,36,435	0/0:10,0:10:27.08:0,27,326	0/0:19,0:19:54.17:0,54,652	0/0:12,0:12:36.10:0,36,421	0/0:1,0:1:3.01:0,3,36	1/1:1,5:6:15.02:144,15,0	1/1:1,6:7:18.03:174,18,0	1/1:1,9:10:21.03:203,21,0	1/1:0,5:5:12.02:116,12,0	1/1:0,11:11:33.03:307,33,0	0/0:11,0:11:33.10:0,33,398	1/1:0,29:29:72.12:695,72,0
chr10	79983564	.	GA	G	2422.76	PASS	AB=0.941;AC=13;AF=0.232;AN=56;BaseQRankSum=11.631;DP=560;FS=2.967;HRun=9;HaplotypeScore=56.2412;InbreedingCoeff=0.9095;MQ=79.49;MQ0=0;MQRankSum=1.552;QD=18.08;ReadPosRankSum=2.662;VQSLOD=3.9572;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.15:0,75,837	0/0:5,0:4:15.04:0,15,173	0/0:18,0:17:33.09:0,33,371	0/1:15,1:16:5.43:5,0,261	0/0:26,0:26:72.03:0,72,801	0/0:24,0:24:69.21:0,69,796	0/0:9,0:10:23.89:0,24,247	0/0:30,1:31:64.02:0,64,947	0/0:22,0:22:60.16:0,60,674	0/0:21,2:23:11.23:0,11,614	0/0:22,0:22:63.18:0,63,718	1/1:4,13:17:36.02:329,36,0	1/1:1,16:17:45.02:412,45,0	1/1:0,14:15:41.06:363,41,0	0/0:22,0:22:60.18:0,60,692	0/0:17,0:17:51.14:0,51,579	0/0:22,0:23:65.99:0,66,718	0/0:14,0:14:39.09:0,39,437	0/0:26,0:26:66.20:0,66,762	0/0:29,0:29:81.21:0,81,909	0/0:16,0:16:42.12:0,42,485	1/1:4,17:21:50.98:459,51,0	1/1:3,21:24:57.03:522,57,0	1/1:2,22:24:57.03:522,57,0	0/0:16,0:16:39.12:0,39,450	0/0:20,0:20:51.13:0,51,573	0/0:28,0:28:75.21:0,75,857	0/0:7,0:7:18.05:0,18,207
chr10	79984443	.	G	GGCCTTAA	4951.87	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-1.866;DP=677;FS=5.272;HRun=0;HaplotypeScore=154.3219;InbreedingCoeff=0.7810;MQ=79.83;MQ0=0;MQRankSum=-10.034;QD=72.82;ReadPosRankSum=-1.398;VQSLOD=4.6736;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,17:23:63.22:2212,63,0	0/0:9,0:9:24.08:0,24,609	0/0:19,0:20:38.75:0,39,754	0/1:14,0:14:20.93:21,0,267	0/0:30,0:30:84.24:0,84,1949	0/0:31,0:31:90.31:0,90,2231	0/0:24,0:24:72.25:0,72,1797	0/0:26,0:26:65.34:0,65,1554	0/0:20,0:20:60.21:0,60,1509	0/0:28,0:28:81.27:0,81,1988	0/0:18,0:18:54.17:0,54,1319	0/0:27,0:27:75.23:0,75,1846	0/0:32,0:32:90.29:0,90,2214	0/0:23,0:23:66.23:0,66,1674	0/0:35,0:35:96.33:0,96,2436	0/0:38,0:38:99:0,108,2697	0/0:18,0:18:54.19:0,54,1367	0/0:13,0:12:33.11:0,33,819	0/0:20,0:20:60.21:0,60,1430	0/0:30,0:30:87.30:0,87,2130	0/0:32,0:32:93.32:0,93,2269	0/0:26,0:26:75.24:0,75,1849	0/0:19,0:19:57.20:0,57,1392	0/0:19,0:19:48.15:0,48,1148	1/1:10,20:31:75.21:2719,75,0	0/0:21,0:21:60.21:0,60,1505	0/0:37,0:37:99:0,102,2589	0/0:13,0:13:39.13:0,39,990
chr10	79985869	.	T	TA	433.57	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.672;DP=595;FS=7.327;HRun=6;HaplotypeScore=62.4619;InbreedingCoeff=0.9908;MQ=80.05;MQ0=0;MQRankSum=-0.963;QD=25.50;ReadPosRankSum=2.078;VQSLOD=3.7406;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.13:0,57,581	0/0:6,0:6:18.04:0,18,184	0/0:17,0:17:38.81:0,39,373	0/0:14,0:14:28.74:0,29,265	0/0:30,0:30:78.16:0,78,789	0/0:24,0:24:66.14:0,66,666	0/0:13,0:13:36.08:0,36,367	0/0:32,0:32:72.14:0,72,727	0/0:24,0:24:66.15:0,66,673	0/0:19,0:19:51.11:0,51,516	0/0:23,0:23:60.13:0,60,612	0/0:17,0:17:51.09:0,51,512	0/0:18,0:18:51.11:0,51,520	0/0:21,0:21:54.12:0,54,551	0/0:23,0:23:57.12:0,57,582	0/0:17,0:17:51.11:0,51,519	0/0:27,0:27:57.09:0,57,572	0/0:22,0:22:63.06:0,63,621	0/0:27,0:27:69.15:0,69,703	0/0:37,0:37:96.21:0,96,979	0/0:12,0:12:33.07:0,33,336	0/0:32,0:32:93.21:0,93,948	0/0:18,0:18:48.11:0,48,490	0/0:16,0:16:45.10:0,45,459	1/1:2,15:17:42.13:528,42,0	0/0:30,0:30:90.20:0,90,918	0/0:24,0:24:69.16:0,69,704	0/0:15,0:15:42.10:0,42,429
chr10	79987225	.	A	AT	562.98	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.586;DP=520;FS=4.610;HRun=8;HaplotypeScore=56.1174;InbreedingCoeff=0.9572;MQ=70.71;MQ0=0;MQRankSum=-1.282;QD=25.59;ReadPosRankSum=-0.460;VQSLOD=4.2647;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:36.02:0,36,329	0/0:12,0:12:30.01:0,30,274	0/0:7,0:7:17.81:0,18,150	0/0:9,0:9:17.87:0,18,151	0/0:41,0:41:93.02:0,93,846	1/1:2,20:22:57.17:658,57,0	0/0:9,0:10:18.01:0,18,165	0/0:27,0:27:66.02:0,66,604	0/0:9,0:9:18.01:0,18,165	0/0:23,0:23:66.04:0,66,604	0/0:32,0:32:90.04:0,90,823	0/0:18,0:18:48:0,48,434	0/0:19,0:19:50.99:0,51,457	0/0:12,0:12:33:0,33,298	0/0:18,0:18:51.01:0,51,462	0/0:29,0:29:75.02:0,75,683	0/0:16,0:16:29.87:0,30,262	0/0:15,0:15:41.98:0,42,377	0/0:11,0:11:27.01:0,27,247	0/0:21,0:21:51.02:0,51,466	0/0:8,0:8:18:0,18,165	0/0:20,0:20:50.98:0,51,452	0/0:18,0:18:51.03:0,51,466	0/0:11,0:11:30.02:0,30,274	0/0:33,0:33:87.02:0,87,790	0/0:26,0:26:60.01:0,60,545	0/0:29,0:29:69.03:0,69,631	0/0:10,0:10:30.02:0,30,275
chr10	79987781	.	A	AT	12693.16	PASS	AB=0.929;AC=23;AF=0.411;AN=56;BaseQRankSum=11.344;DP=741;FS=7.283;HRun=1;HaplotypeScore=115.5858;InbreedingCoeff=0.9338;MQ=81.01;MQ0=0;MQRankSum=-15.152;QD=40.30;ReadPosRankSum=1.940;VQSLOD=4.2246;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:32:66.22:1049,66,0	0/1:12,1:13:8.67:9,0,461	0/0:24,0:24:72.21:0,72,971	0/0:23,0:23:52.73:0,53,730	0/0:34,0:34:96.32:0,96,1339	1/1:2,39:41:99:1819,114,0	0/0:17,0:17:51.17:0,51,713	0/0:32,0:32:93.30:0,93,1269	0/0:20,0:20:60.18:0,60,821	0/0:30,0:30:90.28:0,90,1224	0/0:17,0:17:48.16:0,48,671	1/1:0,26:26:75.26:1196,75,0	1/1:2,29:31:87.30:1388,87,0	1/1:5,25:30:87.26:1328,87,0	0/0:31,0:31:90.30:0,90,1257	0/0:27,0:27:81.27:0,81,1131	0/0:27,0:27:78.23:0,78,1070	0/0:16,0:16:45.15:0,45,625	0/0:41,0:41:99:0,117,1602	0/0:34,0:34:96.31:0,96,1326	0/0:22,0:22:66.22:0,66,921	1/1:4,31:35:90.31:1431,90,0	1/1:1,28:29:78.27:1242,78,0	1/1:2,21:23:56.92:880,57,0	1/1:1,19:20:60.20:957,60,0	1/1:5,21:26:36.28:1108,36,0	0/0:31,0:30:93.31:0,93,1295	1/1:2,6:8:18.06:287,18,0
chr10	79987812	.	TTG	T	8333.15	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=19.642;DP=718;FS=14.241;HRun=0;HaplotypeScore=137.5101;InbreedingCoeff=0.9300;MQ=67.25;MQ0=1;MQRankSum=-14.383;QD=26.79;ReadPosRankSum=2.416;VQSLOD=5.3684;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:39.26:112,39,0	0/0:12,0:12:17.33:0,17,512	0/0:40,0:30:84.23:0,84,1165	0/1:17,0:16:1.16:1,0,438	0/0:23,0:23:69.18:0,69,1004	1/1:40,0:40:99:1452,111,0	0/0:23,0:23:69.14:0,69,1010	0/0:31,0:31:81.22:0,81,1256	0/0:14,0:14:42.14:0,42,719	0/0:29,0:29:78.23:0,78,1300	0/0:23,0:23:63.13:0,63,914	1/1:1,20:21:54.18:760,54,0	1/1:3,23:26:72.24:1033,72,0	1/1:1,31:32:87.29:1253,87,0	0/0:30,0:30:77.69:0,78,1319	0/0:24,0:24:72.20:0,72,1173	0/0:26,0:26:78.23:0,78,1296	0/0:15,0:15:39.08:0,39,584	0/0:37,0:37:99:0,101,1508	0/0:25,0:25:75.21:0,75,1223	0/0:24,0:24:72.10:0,72,1135	1/1:0,30:31:93.28:1307,93,0	1/1:0,31:31:87.29:1222,87,0	1/1:3,25:28:54.18:781,54,0	1/1:17,0:17:41.60:233,42,0	1/1:31,0:31:4.68:152,5,0	0/0:31,0:29:93.26:0,93,1452	1/1:5,0:5:9.53:27,10,0
chr10	79987813	.	TG	T	5508.36	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=20.375;DP=703;FS=13.341;HRun=1;HaplotypeScore=132.4077;InbreedingCoeff=0.9917;MQ=66.87;MQ0=1;MQRankSum=-14.427;QD=19.19;ReadPosRankSum=2.075;VQSLOD=3.8744;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:66.17:889,66,0	0/0:11,0:12:16.53:0,17,438	0/0:39,0:29:83.97:0,84,1038	0/0:17,1:16:12.05:0,12,383	0/0:23,0:23:69.17:0,69,893	1/1:5,35:40:99:811,115,0	0/0:23,0:23:69.15:0,69,877	0/0:27,0:27:81.25:0,81,1095	0/0:14,0:14:42.14:0,42,598	0/0:27,0:27:78.25:0,78,1090	0/0:22,0:22:63.12:0,63,787	1/1:20,0:20:49.04:240,49,0	1/1:25,1:26:67.51:347,68,0	1/1:31,0:31:81.09:415,81,0	0/0:30,0:30:82.97:0,83,1144	0/0:24,0:24:72.20:0,72,980	0/0:26,0:26:78.24:0,78,1083	0/0:14,0:14:39.04:0,39,488	0/0:36,0:36:88.88:0,89,1279	0/0:25,0:25:75.15:0,75,1016	0/0:24,0:24:72.09:0,72,950	1/1:31,0:31:86.13:431,86,0	1/1:31,0:31:79.27:389,79,0	1/1:27,0:27:51.28:280,51,0	1/1:1,4:17:47.68:407,48,0	1/1:2,28:30:46.29:1090,46,0	0/0:32,0:30:93.24:0,93,1225	1/1:0,5:5:15.05:208,15,0
chr10	79987816	.	TG	T	838.84	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=11.191;DP=693;FS=0.000;HRun=1;HaplotypeScore=146.3254;InbreedingCoeff=0.7464;MQ=63.59;MQ0=1;MQRankSum=-9.780;QD=9.87;ReadPosRankSum=1.029;VQSLOD=1.3506;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:10.18:25,0,10	0/0:12,0:12:22.79:0,23,478	0/0:36,0:25:72.19:0,72,1051	0/0:16,0:15:32.99:0,33,415	0/0:22,0:22:66.22:0,66,1008	1/1:5,34:39:99:785,112,0	0/0:23,0:23:69.23:0,69,1081	0/0:26,0:26:78.26:0,78,1200	0/0:14,0:14:42.14:0,42,661	0/0:26,0:26:78.27:0,78,1218	0/0:22,0:22:66.13:0,66,981	0/0:20,0:20:46.64:0,47,252	0/0:24,1:25:56.91:0,57,360	0/0:32,0:32:80.17:0,80,501	0/0:29,0:29:84.73:0,85,1281	0/0:24,0:24:72.20:0,72,1086	0/0:25,0:24:72.24:0,72,1132	0/0:14,0:14:39.13:0,39,601	0/0:32,0:32:96.32:0,96,1470	0/0:24,0:24:69.23:0,69,1084	0/0:24,0:24:72.23:0,72,1111	0/0:31,0:31:74.83:0,75,455	0/0:32,0:32:84.95:0,85,524	0/0:28,0:28:52.14:0,52,342	1/1:16,0:16:36.02:158,36,0	0/0:33,0:33:34.30:0,34,318	0/0:32,0:30:90.30:0,90,1404	0/0:5,0:5:1.75:0,2,8
chr10	79989250	.	CCTT	C	1136.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.338;DP=722;FS=12.761;HRun=0;HaplotypeScore=101.9191;InbreedingCoeff=0.9907;MQ=66.53;MQ0=0;MQRankSum=0.253;QD=37.87;ReadPosRankSum=3.110;VQSLOD=4.3391;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:96.20:0,96,1880	0/0:14,0:14:36.12:0,36,763	0/0:24,0:24:53.93:0,54,880	0/0:12,0:11:17.51:0,18,247	0/0:36,0:36:99:0,108,2284	0/0:31,0:31:84.29:0,84,1760	0/0:19,0:19:57.20:0,57,1199	0/0:27,0:27:66.23:0,66,1377	0/0:21,0:21:57.20:0,57,1208	0/0:28,0:28:75.26:0,75,1572	0/0:21,0:21:35.28:0,35,1181	0/0:23,0:23:69.24:0,69,1462	0/0:37,0:37:99:0,108,2263	0/0:29,0:29:72.25:0,72,1521	0/0:30,0:30:75.26:0,75,1589	0/0:22,0:22:60.21:0,60,1272	0/0:27,0:26:78.27:0,78,1641	0/0:17,0:17:45.11:0,45,883	0/0:22,0:22:42.14:0,42,838	0/0:30,0:30:81.28:0,81,1683	0/0:25,0:25:63.22:0,63,1335	0/0:18,0:18:48.16:0,48,1013	0/0:24,0:24:60.19:0,60,1231	0/0:27,0:27:69.24:0,69,1443	1/1:0,30:30:81.28:1231,81,0	0/0:32,0:32:96.33:0,96,1981	0/0:35,0:35:96.33:0,96,2033	0/0:24,0:24:72.25:0,72,1506
chr10	79990319	.	C	CTA	12947	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-10.848;DP=683;FS=2.946;HRun=0;HaplotypeScore=81.2666;InbreedingCoeff=0.9997;MQ=83.41;MQ0=0;MQRankSum=-4.652;QD=48.86;ReadPosRankSum=0.432;VQSLOD=5.9176;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:99:1912,99,0	0/0:13,0:13:39.13:0,39,597	0/0:22,0:22:63.21:0,63,927	0/0:18,0:18:48.16:0,48,706	0/0:33,0:33:96.30:0,96,1425	1/1:1,23:24:63.21:1174,63,0	0/0:23,0:23:69.22:0,69,1021	0/0:43,0:43:99:0,123,1865	0/0:28,0:28:84.25:0,84,1243	0/0:29,0:29:84.28:0,84,1269	0/0:21,0:21:57.18:0,57,852	1/1:4,15:20:51.12:907,51,0	1/1:3,22:27:66.23:1252,66,0	1/1:1,24:26:63.22:1217,63,0	0/0:21,0:21:63.21:0,63,964	0/0:24,0:24:69.22:0,69,1034	0/0:23,0:23:69.23:0,69,1056	0/0:8,0:8:24.08:0,24,367	0/0:18,0:18:48.16:0,48,735	0/0:35,0:35:99:0,102,1561	0/0:17,0:17:51.17:0,51,779	1/1:1,23:24:66.23:1252,66,0	1/1:3,18:21:48.10:865,48,0	1/1:0,19:19:51.17:985,51,0	1/1:1,17:19:51.17:967,51,0	1/1:3,27:30:81.28:1565,81,0	0/0:42,0:42:99:0,123,1840	1/1:4,14:18:45.15:851,45,0
chr10	79991742	.	T	TACACACAC	491.96	PASS	AB=1.000;AC=14;AF=0.269;AN=52;BaseQRankSum=1.215;DP=399;FS=3.136;HRun=0;HaplotypeScore=133.0301;InbreedingCoeff=0.2990;MQ=71.29;MQ0=8;MQRankSum=0.111;QD=3.09;ReadPosRankSum=1.087;VQSLOD=2.6711;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:30:34.61:35,0,215	0/0:3,0:3:2.88:0,3,15	./.	./.	0/1:8,0:8:0:0,0,0	0/0:16,0:15:4.78:0,5,55	0/0:8,0:7:12.04:0,12,246	0/1:25,0:25:7.49:22,0,7	0/0:11,0:11:20.91:0,21,258	0/0:9,0:9:9.01:0,9,127	0/0:1,0:3:6.02:0,6,111	1/1:14,0:14:5.75:99,6,0	1/1:13,0:11:6.91:136,7,0	0/0:6,4:12:0.88:0,1,2	0/0:15,0:15:3.02:0,3,75	0/0:10,0:13:19.03:0,19,363	0/0:30,0:29:43.23:0,43,913	0/0:13,0:10:5.93:0,6,82	0/0:12,0:12:10.06:0,10,141	0/0:7,0:7:8.24:0,8,154	0/0:26,0:25:33.18:0,33,517	1/1:11,0:11:6.02:185,6,0	0/1:17,0:17:0.69:44,0,1	1/1:11,0:11:8.68:83,9,0	0/1:17,0:17:20.05:20,0,247	0/1:12,0:12:13.63:14,0,90	0/0:10,0:10:4.91:0,5,213	0/0:14,0:13:3.01:0,3,56
chr10	79991769	.	ACACACACACACACACG	A	382.61	PASS	AB=0.888;AC=6;AF=0.107;AN=56;BaseQRankSum=0.949;DP=418;FS=3.100;HRun=0;HaplotypeScore=159.0716;InbreedingCoeff=0.0567;MQ=48.25;MQ0=20;MQRankSum=2.045;QD=5.39;ReadPosRankSum=-4.780;VQSLOD=1.1983;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:45.23:0,45,2203	0/0:3,0:3:9.01:0,9,349	0/0:3,0:1:3.01:0,3,47	0/0:6,0:3:8.90:0,9,125	0/0:6,0:5:9.03:0,9,543	0/0:19,0:18:12.02:0,12,143	0/0:10,0:9:17.11:0,17,452	0/0:32,0:32:78.39:0,78,908	0/0:18,0:16:39.09:0,39,1599	0/0:16,0:15:42.09:0,42,1763	0/0:8,0:7:21.03:0,21,585	0/1:19,0:17:18.86:19,0,684	0/0:12,0:10:1.61:0,2,865	0/1:13,0:11:11.92:12,0,349	0/0:17,0:17:29.75:0,30,878	0/0:14,0:14:33.10:0,33,1388	0/0:31,0:29:75.26:0,75,3350	0/0:17,0:14:30.09:0,30,538	0/0:8,0:8:14.84:0,15,542	0/0:5,0:5:12.04:0,12,766	0/0:32,0:28:66.17:0,66,2545	0/0:9,0:8:14.97:0,15,753	0/0:17,0:17:7.74:0,8,141	0/1:18,0:17:53.70:54,0,335	0/0:25,0:24:2.91:0,3,1720	0/1:2,9:10:99:275,0,207	0/0:7,0:7:21:0,21,986	1/1:1,9:9:3.01:140,3,0
chr10	79991775	.	ACACACACACG	A	460.45	PASS	AB=0.961;AC=13;AF=0.232;AN=56;BaseQRankSum=0.709;DP=427;FS=0.000;HRun=0;HaplotypeScore=125.3210;InbreedingCoeff=0.0197;MQ=49.83;MQ0=19;MQRankSum=1.828;QD=2.84;ReadPosRankSum=-3.993;VQSLOD=0.8885;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:33.33:0,33,1215	0/0:3,0:3:6.02:0,6,171	1/1:4,0:2:2.03:6,2,0	0/1:10,0:4:1.93:2,0,10	0/0:6,0:5:9.03:0,9,312	0/1:9,11:19:8.08:96,0,8	0/0:11,0:10:20.25:0,20,445	0/0:31,0:31:67.13:0,67,693	0/0:18,0:16:38.89:0,39,1151	0/0:16,0:15:42.03:0,42,1063	0/0:9,0:8:24.02:0,24,431	0/1:18,0:16:85.86:86,0,334	0/1:12,0:10:34.86:35,0,466	0/1:15,0:13:34.03:34,0,189	0/0:17,0:17:16.39:0,16,480	0/0:14,0:14:33.07:0,33,983	0/0:32,0:30:64.22:0,64,2208	0/0:16,0:13:30.63:0,31,436	0/0:7,0:7:14.77:0,15,387	0/0:6,0:6:15.04:0,15,595	0/0:32,0:27:66.03:0,66,1627	0/0:9,0:8:14.93:0,15,328	0/1:19,0:19:14.06:41,0,14	0/1:18,0:17:78.21:78,0,119	0/1:25,0:24:7.88:8,0,861	0/1:11,0:10:99:140,0,142	0/0:8,0:8:23.99:0,24,642	1/1:10,0:9:3.01:78,3,0
chr10	79991783	.	ACG	A	1464.41	PASS	AB=0.978;AC=23;AF=0.411;AN=56;BaseQRankSum=3.449;DP=436;FS=3.752;HRun=0;HaplotypeScore=73.6110;InbreedingCoeff=0.5194;MQ=50.58;MQ0=18;MQRankSum=3.872;QD=7.32;ReadPosRankSum=1.227;VQSLOD=3.1609;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,1:28:56.49:319,0,56	0/1:2,0:2:3.20:3,0,19	1/1:3,0:2:1.99:6,2,0	0/0:7,0:2:2.88:0,3,15	0/0:7,0:6:11.86:0,12,119	1/1:16,0:16:5.94:42,6,0	0/0:11,0:10:20.66:0,21,237	0/0:31,0:31:59.37:0,59,469	0/0:20,0:18:44.68:0,45,449	0/0:20,0:19:50.79:0,51,472	0/0:11,0:10:12.97:0,13,178	1/1:20,0:18:26.29:209,26,0	1/1:12,0:10:23.85:142,24,0	1/1:15,0:13:8.69:93,9,0	0/0:16,0:16:17.40:0,17,175	0/0:13,0:13:16.96:0,17,328	0/0:31,1:30:30.02:0,30,883	0/0:17,0:14:3.48:0,3,177	0/0:10,0:10:8.34:0,8,185	0/0:7,0:7:18.03:0,18,263	0/0:34,0:28:57.66:0,58,679	1/1:10,0:9:11.88:95,12,0	1/1:16,1:19:14.90:124,15,0	1/1:18,0:18:23.95:200,24,0	0/1:23,2:24:44.75:305,0,45	0/1:12,0:11:39.87:91,0,40	0/1:9,0:9:3.99:4,0,199	1/1:10,0:9:2.98:22,3,0
chr10	79991938	.	A	ATTG	4369.03	PASS	AC=22;AF=0.407;AN=54;BaseQRankSum=-2.698;DP=212;FS=3.632;HRun=0;HaplotypeScore=30.0726;InbreedingCoeff=0.8848;MQ=71.28;MQ0=0;MQRankSum=-2.237;QD=52.01;ReadPosRankSum=2.859;VQSLOD=6.1615;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:18.06:414,18,0	0/0:3,0:3:9.02:0,9,127	0/0:6,0:6:12.02:0,12,174	./.	0/0:5,0:5:15.05:0,15,255	1/1:0,3:3:9.03:207,9,0	0/0:6,0:6:18.06:0,18,301	0/0:25,0:25:63.18:0,63,992	0/0:8,0:8:24:0,24,346	0/0:9,0:9:24.08:0,24,409	0/0:3,0:3:9.03:0,9,153	1/1:0,5:5:12.04:276,12,0	1/1:0,2:2:6.02:138,6,0	1/1:0,3:2:3.01:68,3,0	0/0:3,0:3:9.03:0,9,151	0/0:6,0:6:18.06:0,18,306	0/0:16,0:16:45.14:0,45,733	0/0:8,0:8:21.07:0,21,357	0/0:7,0:7:15.01:0,15,224	0/0:12,0:12:36.11:0,36,584	0/0:5,0:5:12.04:0,12,190	1/1:0,11:11:30.10:659,30,0	1/1:2,4:6:9.03:175,9,0	1/1:0,4:4:12.04:276,12,0	1/1:2,19:21:45.15:1016,45,0	1/1:0,11:11:33.11:759,33,0	0/0:5,0:5:15.05:0,15,250	1/1:1,7:9:18.06:382,18,0
chr10	79991999	.	GTATATATATATATATATATA	G	566.03	PASS	AB=1.000;AC=3;AF=0.115;AN=26;BaseQRankSum=2.421;DP=124;FS=0.000;HRun=0;HaplotypeScore=67.4072;InbreedingCoeff=0.4617;MQ=66.21;MQ0=2;MQRankSum=-2.812;QD=31.45;ReadPosRankSum=-0.122;VQSLOD=1.6875;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:3,0:3:0:0,0,0	0/0:2,0:2:6.02:0,6,542	0/0:15,0:5:3.01:0,3,35	0/0:14,0:3:3.01:0,3,52	./.	./.	./.	0/0:13,0:13:19.86:0,20,546	./.	./.	./.	./.	./.	./.	./.	0/0:1,0:2:3.01:0,3,263	0/0:5,0:8:8.06:0,8,287	0/0:6,0:6:15.05:0,15,1382	./.	./.	0/0:3,0:3:0.47:0,0,1	./.	./.	./.	1/1:11,4:15:12.04:646,12,0	0/0:3,0:3:6.02:0,6,371	0/0:6,0:7:15.05:0,15,1317	0/0:6,0:11:18.06:0,18,1014
chr10	79992731	.	CCTCT	C	817.46	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.338;DP=615;FS=0.786;HRun=0;HaplotypeScore=114.5838;InbreedingCoeff=0.9521;MQ=65.85;MQ0=14;MQRankSum=-2.312;QD=17.77;ReadPosRankSum=0.061;VQSLOD=3.1013;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,16:23:27:386,27,0	0/0:7,0:7:18.06:0,18,428	0/0:48,0:21:24.79:0,25,429	0/0:54,0:26:14.25:0,14,331	0/0:21,0:21:51.08:0,51,974	0/0:23,0:23:42.60:0,43,939	0/0:14,0:14:36.12:0,36,881	0/0:34,0:33:63.89:0,64,1209	0/0:15,0:15:42.14:0,42,993	0/0:32,0:32:78.26:0,78,1804	0/0:12,0:10:27.07:0,27,592	0/0:6,0:6:8.95:0,9,117	0/0:16,0:16:36.06:0,36,708	0/0:20,0:20:50.16:0,50,1123	0/0:22,0:21:54.17:0,54,1256	0/0:24,0:24:57.20:0,57,1394	0/0:23,0:22:57.13:0,57,1381	0/0:10,0:10:24.08:0,24,601	0/0:13,0:13:30.09:0,30,608	0/0:23,0:23:51.16:0,51,1170	0/0:21,0:21:21.57:0,22,1098	0/0:23,0:23:39.03:0,39,894	0/0:22,0:23:48.16:0,48,1106	0/0:20,0:21:41.17:0,41,956	1/1:6,16:22:36.51:553,37,0	0/0:27,0:27:75.26:0,75,1841	0/0:22,0:22:53.98:0,54,1153	0/0:12,0:12:33.11:0,33,719
chr10	79992760	.	G	GGTGT	2578.03	PASS	AB=0.817;AC=21;AF=0.404;AN=52;BaseQRankSum=0.820;DP=629;FS=0.559;HRun=0;HaplotypeScore=131.6424;InbreedingCoeff=0.1055;MQ=52.38;MQ0=45;MQRankSum=-0.266;QD=7.04;ReadPosRankSum=-1.815;VQSLOD=2.6425;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,4:26:11.25:273,11,0	0/0:9,0:9:18.06:0,18,282	./.	./.	0/0:15,0:18:15.93:0,16,205	1/1:13,1:27:8.93:175,9,0	0/0:19,0:19:4.12:0,4,303	0/1:25,0:25:5.90:6,0,167	0/1:20,0:17:5.82:6,0,128	0/1:14,1:23:80.54:169,0,81	0/0:12,0:13:21.15:0,21,310	0/1:3,9:13:23.11:369,0,23	1/1:14,5:21:14.55:294,15,0	0/1:16,5:23:64.34:318,0,64	0/0:21,0:27:26.12:0,26,595	0/0:19,0:21:23.27:0,23,335	0/1:24,0:27:9.85:10,0,376	0/0:11,0:12:7.74:0,8,103	0/0:15,0:13:6.01:0,6,75	0/0:17,0:18:14.73:0,15,208	0/0:31,0:29:30.04:0,30,411	1/1:13,8:23:9.50:211,9,0	1/1:13,9:26:23.20:446,23,0	0/1:13,10:25:47.52:205,0,48	0/1:15,2:20:31.73:149,0,32	0/1:22,0:31:51.03:104,0,51	0/1:17,0:17:3.41:3,0,146	0/1:7,0:11:9.12:9,0,125
chr10	79993397	.	GT	G	890.37	PASS	AB=0.978;AC=21;AF=0.404;AN=52;BaseQRankSum=0.180;DP=319;FS=17.510;HRun=8;HaplotypeScore=105.8146;InbreedingCoeff=0.5548;MQ=60.63;MQ0=7;MQRankSum=-1.819;QD=6.10;ReadPosRankSum=2.156;VQSLOD=0.3131;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:11.01:81,11,0	1/1:4,0:4:2.62:7,3,0	0/1:38,2:16:32.87:33,0,135	0/0:36,1:9:10.14:0,10,58	0/0:17,0:17:13.74:0,14,59	1/1:9,2:11:20.95:174,21,0	0/0:5,0:5:6.95:0,7,24	1/1:14,0:14:7.94:17,8,0	0/0:7,0:7:10.50:0,10,58	0/0:11,0:11:3.05:0,3,56	0/0:13,0:13:3.01:0,3,21	1/1:5,0:5:2.99:26,3,0	0/1:8,0:8:1.67:115,0,2	1/1:15,0:15:17.88:162,18,0	0/0:9,0:9:11.33:0,11,58	0/0:9,0:9:9.08:0,9,56	./.	0/0:5,0:5:4.15:0,4,14	0/0:15,0:14:19.19:0,19,144	0/1:16,0:16:1.68:2,0,14	./.	1/1:7,0:7:15.01:137,15,0	1/1:10,1:11:20.94:175,21,0	1/1:8,0:7:15:134,15,0	0/0:15,0:15:4.68:0,5,63	0/0:14,0:14:11.89:0,12,92	0/0:9,0:9:3.95:0,4,37	0/0:4,0:4:0.77:0,1,17
chr10	79993404	.	TTG	T	1476.53	PASS	AB=0.940;AC=23;AF=0.426;AN=54;BaseQRankSum=-2.580;DP=323;FS=9.070;HRun=0;HaplotypeScore=89.0848;InbreedingCoeff=0.4285;MQ=52.42;MQ0=18;MQRankSum=-1.262;QD=14.62;ReadPosRankSum=1.815;VQSLOD=2.8321;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,3:8:20.33:179,20,0	0/1:3,0:3:10:10,0,20	0/0:52,0:13:26.50:0,26,267	0/0:50,0:9:10.72:0,11,136	0/0:17,0:17:30.09:0,30,215	1/1:2,6:8:21.07:292,21,0	0/1:5,0:5:10.28:10,0,43	0/1:14,0:14:5.28:5,0,98	0/0:6,0:6:1.81:0,2,101	0/0:14,0:13:27.76:0,28,201	0/1:12,0:12:9.86:10,0,97	1/1:0,3:3:3.01:40,3,0	0/1:2,5:6:33.43:184,0,33	1/1:0,7:7:20.89:243,21,0	0/0:7,0:7:17.84:0,18,143	0/0:8,0:8:20.63:0,21,171	1/1:3,0:2:1.45:11,1,0	0/1:5,0:5:4.39:4,0,31	0/0:15,0:12:26.42:0,26,259	0/0:15,0:15:8.69:0,9,65	./.	1/1:0,5:5:15.05:196,15,0	1/1:4,6:10:21.07:276,21,0	1/1:1,6:7:15.05:196,15,0	0/0:14,0:14:23.37:0,23,182	0/0:13,0:13:23.61:0,24,215	0/0:8,1:8:20.41:0,20,139	0/1:3,0:3:4.18:4,0,42
chr10	79993405	.	TG	T	1931.06	PASS	AB=0.997;AC=48;AF=0.889;AN=54;BaseQRankSum=1.336;DP=328;FS=16.179;HRun=2;HaplotypeScore=84.2556;InbreedingCoeff=0.0685;MQ=52.02;MQ0=22;MQRankSum=-2.529;QD=5.92;ReadPosRankSum=3.604;VQSLOD=-0.6756;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:8:19.10:93,19,0	1/1:2,0:3:8.92:62,9,0	0/1:53,0:13:0.87:1,0,120	0/1:49,1:9:1.43:1,0,92	1/1:16,0:17:31.48:178,31,0	1/1:8,0:8:19.95:99,20,0	1/1:5,0:5:14.22:76,14,0	1/1:4,11:14:32.71:228,33,0	1/1:6,0:6:6.94:42,7,0	1/1:14,0:13:20.14:147,20,0	1/1:12,0:12:23.52:151,24,0	1/1:3,0:3:2.80:13,3,0	0/1:7,0:6:19.63:50,0,20	1/1:7,0:7:19.70:94,20,0	1/1:6,0:6:10.51:58,11,0	1/1:8,0:8:14.66:82,15,0	1/1:3,0:2:1.45:11,1,0	0/1:5,0:5:11.24:21,0,11	0/1:18,0:13:16.80:56,0,17	1/1:3,11:15:5.92:44,6,0	./.	1/1:5,0:5:14.03:66,14,0	1/1:8,0:10:20.05:117,20,0	1/1:7,0:7:13.96:65,14,0	1/1:15,0:14:11.68:90,12,0	0/1:12,0:12:15.70:64,0,16	1/1:9,0:8:17.65:114,18,0	1/1:3,0:3:5.29:35,5,0
chr10	79993415	.	GGTTTTTTTTTTTTTTTTTTTTTTTT	G	706.96	PASS	AB=1.000;AC=16;AF=0.296;AN=54;BaseQRankSum=4.860;DP=369;FS=22.847;HRun=0;HaplotypeScore=162.6636;InbreedingCoeff=-0.1472;MQ=43.14;MQ0=59;MQRankSum=-0.704;QD=4.81;ReadPosRankSum=-2.606;VQSLOD=0.5077;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:10:16.32:16,0,1103	0/1:3,0:2:13.65:14,0,223	0/0:52,0:9:10.88:0,11,202	0/0:51,0:9:1.28:0,1,85	0/0:20,0:19:27.04:0,27,2358	1/1:7,2:8:20.31:447,20,0	0/0:9,0:7:4.35:0,4,1214	0/1:16,0:14:83.13:83,0,864	0/0:7,0:4:9.03:0,9,809	0/1:12,0:10:15.95:16,0,1062	0/1:15,0:13:3.37:3,0,1758	0/0:8,0:6:9.03:0,9,198	0/0:12,0:9:10.29:0,10,735	0/1:8,0:7:5.77:6,0,182	0/0:5,0:5:12.04:0,12,884	0/1:9,0:8:17.33:17,0,1190	0/0:8,0:5:9.03:0,9,737	0/0:6,0:5:9.03:0,9,752	0/0:18,0:10:24.08:0,24,1793	0/0:14,0:13:6.02:0,6,394	./.	0/1:6,0:6:30.07:30,0,154	0/1:12,0:10:24.72:25,0,131	0/1:14,0:7:29.53:32,0,30	1/1:6,8:12:8.78:132,9,0	0/1:10,0:7:27.46:27,0,160	0/0:10,0:8:0.49:0,0,1112	0/1:5,0:4:10.59:11,0,220
chr10	79994305	.	AT	A	773.37	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.483;DP=539;FS=18.921;HRun=8;HaplotypeScore=50.3608;InbreedingCoeff=0.9192;MQ=65.29;MQ0=0;MQRankSum=0.088;QD=23.44;ReadPosRankSum=2.898;VQSLOD=2.2616;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.19:0,63,761	0/0:10,0:10:24.07:0,24,290	0/0:9,0:10:23.54:0,24,275	0/0:4,0:3:7.44:0,7,52	0/0:23,0:24:66.07:0,66,775	0/0:23,0:23:63.18:0,63,744	0/0:13,0:13:36.11:0,36,434	0/0:35,0:35:81.24:0,81,968	0/0:17,0:17:45.14:0,45,543	0/0:21,0:21:48.15:0,48,580	0/0:26,0:26:75.23:0,75,905	0/0:14,0:14:42.13:0,42,507	0/0:17,0:17:51.14:0,51,603	0/0:10,0:10:27.08:0,27,326	0/0:17,0:17:45.14:0,45,541	0/0:24,0:24:72.22:0,72,867	0/0:27,0:27:72.19:0,72,852	0/0:9,0:9:27.08:0,27,326	0/0:15,0:15:42.12:0,42,496	0/0:34,0:34:90.28:0,90,1087	0/0:11,0:11:30.09:0,30,362	0/0:16,0:16:45.14:0,45,544	0/0:27,0:27:72.21:0,72,858	0/0:10,0:10:27.08:0,27,326	1/1:2,31:33:90.14:868,90,0	0/0:23,0:23:63.06:0,63,722	0/0:34,0:34:99:0,102,1220	0/0:14,0:14:42.13:0,42,507
chr10	79996925	.	AACAGAGACAGAG	A	6974.06	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=12.922;DP=681;FS=16.891;HRun=0;HaplotypeScore=201.5300;InbreedingCoeff=0.8856;MQ=73.59;MQ0=3;MQRankSum=-12.036;QD=25.18;ReadPosRankSum=0.230;VQSLOD=2.8407;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,32:48:20.63:566,21,0	0/0:12,0:12:30.10:0,30,1290	0/0:26,0:14:8.90:0,9,237	0/1:31,0:23:22.26:22,0,229	0/0:24,0:24:60.21:0,60,3068	1/1:3,19:22:15.02:441,15,0	0/0:29,0:29:66.23:0,66,3182	0/0:18,0:18:30.10:0,30,1031	0/0:14,0:14:30.09:0,30,1361	0/0:17,0:16:42.14:0,42,2184	0/0:19,0:19:42.14:0,42,1709	1/1:5,18:23:24.08:840,24,0	1/1:4,23:27:51.13:1622,51,0	1/1:7,22:29:36.09:1176,36,0	0/0:26,0:26:54.17:0,54,2188	0/0:20,0:20:51.18:0,51,2913	0/0:39,0:39:84.29:0,84,4053	0/0:30,0:30:72.22:0,72,3439	0/0:16,0:15:24.08:0,24,876	0/0:27,0:27:69.20:0,69,3067	0/0:30,0:30:66.19:0,66,2885	1/1:4,14:18:23.87:415,24,0	1/1:6,11:17:12.04:420,12,0	1/1:15,17:32:6.02:210,6,0	1/1:8,22:30:36.12:1261,36,0	0/0:29,0:29:52.99:0,53,2194	0/0:19,0:19:42.14:0,42,2082	0/0:9,0:9:21.07:0,21,798
chr10	79997662	.	CTCTGTCTG	C	2002.82	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=6.502;DP=415;FS=2.763;HRun=0;HaplotypeScore=124.4901;InbreedingCoeff=0.8681;MQ=67.64;MQ0=4;MQRankSum=-7.759;QD=38.52;ReadPosRankSum=0.597;VQSLOD=3.0539;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:23:60.21:0,60,2043	0/0:8,0:8:21.07:0,21,864	0/0:30,0:23:3.01:0,3,53	0/0:30,0:23:12.49:0,12,208	0/0:11,0:11:27.09:0,27,1061	1/1:1,0:2:6.01:82,6,0	0/0:28,0:29:54.15:0,54,1813	0/0:20,0:20:33.11:0,33,853	0/0:24,0:24:50.74:0,51,2082	0/0:11,0:11:30.10:0,30,969	0/0:10,0:10:15.05:0,15,527	1/1:2,9:12:28.79:742,29,0	1/1:3,2:5:15.05:345,15,0	1/1:3,6:10:21.07:484,21,0	0/0:11,0:11:27.09:0,27,857	0/0:13,0:12:24.08:0,24,909	0/0:14,0:14:42.14:0,42,1710	0/0:14,0:15:42.13:0,42,1598	0/0:13,0:13:18.06:0,18,649	0/0:19,0:19:42.13:0,42,1449	0/0:34,0:36:87.26:0,87,3178	1/1:5,4:9:15.04:326,15,0	1/1:3,2:5:3.01:75,3,0	0/0:7,2:9:0:0,0,0	1/1:4,0:9:15:129,15,0	0/0:17,0:21:42.08:0,42,967	0/0:13,0:14:42.14:0,42,1474	./.
chr10	79997736	.	A	ATGTG	3970.18	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-3.938;DP=621;FS=7.981;HRun=0;HaplotypeScore=134.2471;InbreedingCoeff=0.9607;MQ=58.86;MQ0=11;MQRankSum=-1.781;QD=24.66;ReadPosRankSum=1.452;VQSLOD=3.1816;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,2:38:20.39:347,20,0	0/0:8,0:8:12.04:0,12,196	0/0:35,0:15:9.03:0,9,111	0/0:46,0:26:24.03:0,24,327	0/0:16,0:18:48.09:0,48,664	0/0:4,0:20:36.81:0,37,359	0/0:26,0:25:66.22:0,66,1053	0/0:22,0:21:26.58:0,27,345	0/0:16,0:16:27.53:0,28,372	0/0:19,0:19:36.05:0,36,568	0/0:11,0:12:24.06:0,24,343	1/1:13,8:23:14.33:305,14,0	1/1:5,7:13:17.80:374,18,0	1/1:9,12:21:17.61:439,18,0	0/0:23,0:23:48.16:0,48,786	0/0:18,0:19:45.14:0,45,713	0/0:30,0:32:60.18:0,60,936	0/0:15,0:16:21.03:0,21,294	0/0:18,0:16:17.95:0,18,405	0/0:15,0:15:24.02:0,24,341	0/0:50,0:53:97.34:0,97,1560	1/1:4,11:15:27.09:659,27,0	1/1:4,9:15:32.26:680,32,0	1/1:4,29:33:48.12:1168,48,0	0/0:3,0:7:9.01:0,9,84	0/0:1,0:20:32.95:0,33,352	0/0:27,0:27:48.11:0,48,690	0/0:1,0:7:18.02:0,18,168
chr10	79998311	.	G	GAT	1445.44	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.943;DP=535;FS=3.297;HRun=0;HaplotypeScore=59.1916;InbreedingCoeff=0.9312;MQ=73.70;MQ0=0;MQRankSum=0.194;QD=39.07;ReadPosRankSum=0.692;VQSLOD=5.6039;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.13:0,57,676	0/0:8,0:8:18.06:0,18,227	0/0:11,0:11:19.90:0,20,176	0/0:8,0:7:12:0,12,133	0/0:28,0:28:78.23:0,78,970	1/1:1,20:21:54.18:898,54,0	0/0:8,0:8:21.07:0,21,265	0/0:21,0:21:51.16:0,51,633	0/0:21,0:21:54.16:0,54,668	0/0:26,0:26:69.22:0,69,870	0/0:20,0:20:42.12:0,42,518	0/0:18,0:18:51.15:0,51,632	0/0:30,0:30:78.24:0,78,969	0/0:18,0:18:51.16:0,51,644	0/0:19,0:19:48.15:0,48,605	0/0:16,0:17:47.98:0,48,581	0/0:18,0:18:42.12:0,42,529	0/0:23,0:23:57.17:0,57,705	0/0:16,0:16:33.09:0,33,403	0/0:30,0:30:78.25:0,78,984	0/0:11,0:11:30.08:0,30,364	0/0:22,0:22:60.19:0,60,757	0/0:18,0:18:42.13:0,42,529	0/0:20,0:20:48.12:0,48,588	1/1:2,14:16:7.29:660,7,0	0/0:32,0:33:84.08:0,84,1012	0/0:19,0:19:51.16:0,51,643	0/0:13,0:14:38.96:0,39,468
chr10	79998825	.	T	TTA	10043.76	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-13.696;DP=752;FS=3.158;HRun=0;HaplotypeScore=83.5681;InbreedingCoeff=0.9993;MQ=67.69;MQ0=0;MQRankSum=-1.986;QD=50.98;ReadPosRankSum=3.024;VQSLOD=5.6652;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:72.25:1390,72,0	0/0:9,0:9:21.04:0,21,298	0/0:21,0:21:51.17:0,51,768	0/0:31,0:30:84.28:0,84,1266	0/0:50,0:50:99:0,141,2098	0/0:21,0:21:60.20:0,60,916	0/0:20,0:20:60.20:0,60,919	0/0:39,0:39:99:0,111,1634	0/0:18,0:18:54.18:0,54,827	0/0:26,0:26:72.24:0,72,1102	0/0:31,0:31:93.32:0,93,1413	1/1:0,35:35:96.33:1853,96,0	1/1:0,22:22:63.22:1216,63,0	1/1:3,36:41:99:2012,105,0	0/0:32,0:32:93.31:0,93,1402	0/0:29,0:29:81.27:0,81,1221	0/0:28,0:28:81.23:0,81,1191	0/0:24,0:24:66.21:0,66,989	0/0:24,0:24:66.20:0,66,953	0/0:25,0:25:75.25:0,75,1149	0/0:24,0:24:72.24:0,72,1102	1/1:1,20:21:54.19:1043,54,0	1/1:2,22:24:60.21:1159,60,0	1/1:1,26:26:72.25:1370,72,0	0/0:25,0:25:72.23:0,72,1077	0/0:25,0:25:69.23:0,69,1057	0/0:34,0:34:98.99:0,99,1514	0/0:19,0:18:54.18:0,54,824
chr10	79999196	.	TC	T	292.56	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.495;DP=421;FS=0.000;HRun=9;HaplotypeScore=55.2373;InbreedingCoeff=0.8100;MQ=76.16;MQ0=0;MQRankSum=-0.900;QD=16.25;ReadPosRankSum=1.829;VQSLOD=3.6129;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:80.35:0,80,578	0/0:2,0:2:3.01:0,3,35	0/0:17,0:15:37.67:0,38,302	0/0:17,0:16:18.75:0,19,323	0/0:13,0:13:32.93:0,33,337	0/0:5,0:10:0.47:0,0,1	0/0:17,0:17:48.11:0,48,532	0/0:21,0:21:11.66:0,12,364	0/0:14,1:15:14.64:0,15,411	0/0:18,1:19:11.79:0,12,388	0/0:17,0:17:44.13:0,44,460	0/0:17,0:17:44.74:0,45,346	0/0:17,0:17:41.75:0,42,317	0/0:22,0:22:59.60:0,60,459	0/0:18,0:18:51.15:0,51,589	0/0:9,0:10:26.89:0,27,274	0/0:20,0:20:57.16:0,57,651	0/0:9,0:9:27.08:0,27,312	0/0:14,0:14:36.05:0,36,383	0/0:15,0:15:34.28:0,34,351	0/0:14,0:14:39.10:0,39,440	0/0:11,0:11:23.91:0,24,200	0/0:9,0:9:26.73:0,27,185	0/0:12,0:12:32.81:0,33,244	0/0:10,0:11:11.85:0,12,89	1/1:2,8:10:27.01:246,27,0	0/0:22,0:22:32.75:0,33,630	1/1:1,7:8:18:165,18,0
chr10	79999465	.	GGATAGATAGATA	G	622.39	PASS	AB=0.938;AC=19;AF=0.396;AN=48;BaseQRankSum=-1.864;DP=458;FS=1.811;HRun=0;HaplotypeScore=164.3470;InbreedingCoeff=0.2789;MQ=67.95;MQ0=7;MQRankSum=-1.333;QD=3.13;ReadPosRankSum=1.559;VQSLOD=2.8333;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:6.46:49,6,0	1/1:5,0:5:0.86:57,1,0	./.	./.	0/0:18,0:22:12.02:0,12,176	1/1:15,0:15:2.92:17,3,0	0/1:22,0:22:7.76:8,0,103	0/0:23,0:23:0:0,0,0	0/0:16,0:16:6.23:0,6,76	0/0:10,0:14:1.95:0,2,39	0/0:13,0:13:5.96:0,6,45	0/0:22,0:22:39.04:0,39,1048	0/1:22,0:22:8.78:9,0,128	0/0:25,0:25:27.04:0,27,405	0/0:13,0:13:6.56:0,7,131	1/1:14,0:14:17.90:265,18,0	0/0:20,0:21:12.03:0,12,186	0/1:6,5:11:34.90:72,0,35	0/1:18,0:16:20.94:21,0,43	./.	1/1:12,1:12:9:115,9,0	0/0:15,0:15:9.01:0,9,200	0/0:10,0:10:6:0,6,51	0/0:11,0:11:9.03:0,9,291	0/1:20,0:20:83.30:90,0,83	1/1:17,0:17:2.94:18,3,0	1/1:11,9:20:3.01:52,3,0	./.
chr10	79999540	.	T	TAGGC	864.09	PASS	AB=0.882;AC=14;AF=0.250;AN=56;BaseQRankSum=5.829;DP=431;FS=3.484;HRun=0;HaplotypeScore=107.0881;InbreedingCoeff=0.6854;MQ=49.18;MQ0=9;MQRankSum=-6.228;QD=5.65;ReadPosRankSum=-4.907;VQSLOD=0.1952;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:24:0.45:1,0,0	0/0:4,0:4:9.02:0,9,124	0/1:42,0:23:0.70:1,0,252	0/0:32,0:16:11.07:0,11,151	0/0:10,0:10:18.04:0,18,296	0/0:14,0:14:21.07:0,21,314	0/0:19,0:18:45.13:0,45,698	0/0:28,0:26:30.08:0,30,441	0/0:12,0:12:27.09:0,27,444	0/0:8,0:8:6:0,6,99	0/0:7,0:7:6.02:0,6,99	1/1:11,8:19:18.06:380,18,0	1/1:4,4:9:15.11:263,15,0	1/1:10,9:19:15.04:309,15,0	0/0:13,0:13:27.08:0,27,420	0/0:14,0:15:38.92:0,39,593	0/0:10,0:10:11.78:0,12,196	0/0:12,0:12:21.05:0,21,319	0/0:17,0:16:18.03:0,18,269	0/0:8,0:8:6.02:0,6,99	0/0:15,0:14:27.02:0,27,370	0/1:9,3:11:0.06:0,0,0	1/1:8,0:8:3.01:52,3,0	1/1:6,12:17:0.72:2,1,0	0/0:13,0:13:8.31:0,8,139	0/0:14,0:13:15.05:0,15,233	0/0:20,0:20:24.08:0,24,393	0/0:6,0:6:18.06:0,18,276
chr10	79999568	.	GGAGAGAGAGAGAGAAAGAGAGA	G	390.85	PASS	AB=0.996;AC=20;AF=0.357;AN=56;BaseQRankSum=4.357;DP=335;FS=14.312;HRun=0;HaplotypeScore=154.9695;InbreedingCoeff=0.3424;MQ=52.27;MQ0=15;MQRankSum=-2.615;QD=2.29;ReadPosRankSum=2.144;VQSLOD=1.9108;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:5.33:48,5,0	0/0:3,0:3:5.98:0,6,49	0/1:28,0:17:7.82:8,0,59	0/1:38,0:11:39.49:39,0,40	0/0:11,0:10:17.97:0,18,152	0/1:7,0:7:11.26:34,0,11	0/0:23,0:22:41.47:0,41,673	0/0:16,0:15:30.01:0,30,275	0/0:12,0:12:22.05:0,22,1070	0/0:10,0:10:24:0,24,805	0/0:3,0:3:3:0,3,28	1/1:10,0:10:7.24:48,7,0	0/1:10,0:9:66.06:66,0,87	1/1:12,0:11:5.25:34,5,0	0/0:10,0:10:26.92:0,27,818	0/0:14,0:14:19.10:0,19,377	0/1:13,0:10:15.62:16,0,438	0/0:9,0:9:8.98:0,9,674	0/0:15,0:14:26.57:0,27,672	0/0:4,0:4:9.90:0,10,159	0/0:12,0:13:32.27:0,32,804	1/1:4,0:4:2.74:24,3,0	0/0:1,5:6:0.47:0,0,1	1/1:19,0:16:11.06:96,11,0	1/1:3,0:3:3:25,3,0	1/1:4,0:4:5.96:44,6,0	0/0:15,0:15:21.02:0,21,740	0/1:6,0:6:54.91:81,0,55
chr10	80000860	.	TA	T	5848.82	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.554;DP=607;FS=2.572;HRun=1;HaplotypeScore=60.0601;InbreedingCoeff=0.9995;MQ=81.96;MQ0=0;MQRankSum=-1.463;QD=38.23;ReadPosRankSum=4.073;VQSLOD=5.4690;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:57.19:797,57,0	0/0:8,0:8:24.08:0,24,383	0/0:21,0:21:43.20:0,43,746	0/0:16,0:16:40.16:0,40,528	0/0:30,0:30:90.29:0,90,1409	0/0:29,0:29:87.27:0,87,1343	0/0:14,0:14:42.14:0,42,669	0/0:30,0:30:87.28:0,87,1346	0/0:13,0:13:39.12:0,39,599	0/0:32,0:31:96.32:0,96,1507	0/0:26,0:26:75.22:0,75,1147	1/1:0,23:23:60.20:839,60,0	1/1:0,31:31:84.28:1174,84,0	1/1:0,19:19:51.17:713,51,0	0/0:22,0:22:66.22:0,66,1050	0/0:21,0:21:63.21:0,63,1004	0/0:20,0:20:60.20:0,60,958	0/0:12,0:12:36.12:0,36,575	0/0:25,0:25:75.24:0,75,1167	0/0:22,0:22:63.20:0,63,984	0/0:28,0:28:84.27:0,84,1311	1/1:0,22:22:60.16:815,60,0	1/1:0,23:23:63.17:881,63,0	1/1:0,16:16:45.15:629,45,0	0/0:15,0:15:45.15:0,45,719	0/0:17,0:17:51.17:0,51,814	0/0:41,0:41:99:0,123,1965	0/0:12,0:12:36.12:0,36,574
chr10	80003149	.	A	AT	4196.70	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-13.292;DP=536;FS=1.246;HRun=8;HaplotypeScore=48.7228;InbreedingCoeff=0.9785;MQ=80.27;MQ0=0;MQRankSum=-0.607;QD=27.79;ReadPosRankSum=3.635;VQSLOD=4.0326;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:13.30:0,13,279	0/0:9,0:9:26.99:0,27,240	0/0:16,0:16:8.35:0,8,193	0/0:10,0:10:22.52:0,23,178	0/0:31,0:31:75.02:0,75,686	1/1:0,22:22:66.20:762,66,0	0/0:18,0:18:51.01:0,51,462	0/0:40,0:40:99:0,99,896	0/0:15,0:15:39.01:0,39,357	0/0:27,0:27:75.04:0,75,686	0/0:20,0:20:57.03:0,57,522	1/1:3,19:22:54.16:623,54,0	1/1:1,22:23:51.15:589,51,0	1/1:4,15:19:39.12:450,39,0	0/0:19,0:19:50.99:0,51,459	0/0:17,0:17:45.02:0,45,412	0/0:27,0:27:72.01:0,72,653	0/0:11,0:11:33.02:0,33,302	0/0:17,0:17:48.02:0,48,436	0/0:28,0:28:78.04:0,78,714	0/0:16,0:16:39.02:0,39,357	1/1:2,18:20:23.68:527,24,0	1/1:2,16:18:45.13:519,45,0	1/1:1,9:10:24.07:277,24,0	1/1:3,14:17:39.12:450,39,0	0/0:17,0:17:42.02:0,42,384	0/0:30,0:30:87.04:0,87,796	0/0:4,0:4:12.01:0,12,110
chr10	80005625	.	A	AAT	83.41	PASS	AB=0.853;AC=5;AF=0.50;AN=10;BaseQRankSum=0.439;DP=107;FS=1.957;HRun=0;HaplotypeScore=19.1305;MQ=51.00;MQ0=10;MQRankSum=-0.049;QD=1.30;ReadPosRankSum=-1.122;VQSLOD=0.5525;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/1:41,0:3:0:0,0,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/0:12,0:15:20.72:0,21,196	0/1:2,8:13:29.72:126,0,30	./.	./.	./.	./.	./.	./.	./.	./.	1/1:2,0:2:3:26,3,0	0/1:6,0:7:2.40:2,0,8
chr10	80006362	.	AAAAT	A	1641.88	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=11.993;DP=465;FS=15.926;HRun=0;HaplotypeScore=87.9833;InbreedingCoeff=0.1827;MQ=61.55;MQ0=4;MQRankSum=-0.781;QD=7.05;ReadPosRankSum=-0.613;VQSLOD=0.4935;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:20.96:0,21,261	0/1:4,0:4:19.04:32,0,19	0/0:15,0:7:14.94:0,15,154	0/0:12,0:4:8.49:0,8,69	0/1:24,0:24:4.70:5,0,332	0/1:20,0:20:99:117,0,168	0/0:10,0:10:27.05:0,27,394	0/0:34,0:34:81.07:0,81,762	0/1:20,0:20:84.51:85,0,126	0/1:15,0:15:91.95:92,0,127	0/1:13,0:13:77.55:78,0,121	1/1:3,12:15:20.92:294,21,0	1/1:0,15:15:21.04:330,21,0	1/1:1,13:14:12.04:208,12,0	0/1:18,0:18:99:147,0,117	0/1:18,0:18:91.80:92,0,123	0/0:17,0:16:45.03:0,45,717	0/1:25,0:25:99:155,0,172	0/0:25,0:24:62.97:0,63,774	0/0:28,0:28:75.13:0,75,1307	0/0:12,0:12:36.09:0,36,743	1/1:0,5:5:3.01:52,3,0	1/1:3,3:6:6.02:104,6,0	1/1:7,0:7:3:25,3,0	0/1:14,0:14:7.55:8,0,178	0/0:22,0:22:60.16:0,60,1165	0/0:18,0:18:51.10:0,51,895	0/0:22,0:22:63.04:0,63,835
chr10	80006372	.	AATAC	A	3464.93	PASS	AB=1.000;AC=26;AF=0.500;AN=52;BaseQRankSum=5.035;DP=468;FS=22.318;HRun=0;HaplotypeScore=81.6506;InbreedingCoeff=0.6084;MQ=58.23;MQ0=5;MQRankSum=0.876;QD=15.82;ReadPosRankSum=2.409;VQSLOD=1.0770;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:6.02:0,6,98	1/1:1,2:3:6.02:93,6,0	./.	./.	1/1:12,8:20:14.98:174,15,0	1/1:8,11:19:24.08:374,24,0	0/0:12,0:12:17.96:0,18,301	0/0:32,0:32:14.95:0,15,119	1/1:6,14:20:17.93:280,18,0	1/1:7,6:13:21.06:305,21,0	1/1:4,10:14:26.96:340,27,0	0/1:15,0:15:49.92:150,0,50	1/1:15,0:15:19.30:212,19,0	0/1:17,0:17:71.92:116,0,72	1/1:6,12:18:30.10:467,30,0	1/1:6,8:14:21.07:326,21,0	0/0:17,0:16:24.55:0,25,543	1/1:11,16:27:13.11:447,13,0	0/0:24,0:22:21.07:0,21,433	0/0:29,0:29:51.14:0,51,1061	0/0:16,0:15:36.08:0,36,708	0/1:7,0:7:25.02:25,0,39	0/1:4,0:4:14.97:62,0,15	0/0:10,0:10:4.87:0,5,45	1/1:8,5:13:6.02:93,6,0	0/0:22,0:22:10.73:0,11,571	0/0:21,0:21:39.07:0,39,703	0/0:21,0:21:18.06:0,18,287
chr10	80006396	.	C	CATAT	1186.32	PASS	AB=0.540;AC=13;AF=0.232;AN=56;BaseQRankSum=3.922;DP=500;FS=0.589;HRun=0;HaplotypeScore=96.4776;InbreedingCoeff=0.8740;MQ=57.11;MQ0=6;MQRankSum=-1.039;QD=10.98;ReadPosRankSum=1.049;VQSLOD=3.0743;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:4,23:27:7.02:166,0,7	0/0:4,0:4:9.01:0,9,95	0/0:13,0:8:20.99:0,21,205	0/0:12,0:7:20.98:0,21,194	0/0:15,0:15:33:0,33,325	0/0:19,0:19:45.02:0,45,446	0/0:13,0:13:39.02:0,39,448	0/0:40,0:40:99:0,108,996	0/0:21,0:21:32.89:0,33,328	0/0:15,0:14:38.99:0,39,380	0/0:17,0:17:44.87:0,45,424	1/1:19,0:19:7.29:284,7,0	1/1:17,0:17:28.51:181,29,0	1/1:18,0:18:27.77:287,28,0	0/0:18,0:18:48.05:0,48,494	0/0:16,0:16:39.04:0,39,396	0/0:14,0:13:35.61:0,36,514	0/0:28,0:28:62.97:0,63,609	0/0:19,0:16:45.01:0,45,548	0/0:27,0:26:78.12:0,78,1152	0/0:25,0:24:65.99:0,66,888	1/1:6,0:6:11.51:132,12,0	1/1:6,0:6:12.07:100,12,0	1/1:15,0:15:20.98:220,21,0	0/0:13,0:13:29.99:0,30,271	0/0:25,0:25:72.05:0,72,1038	0/0:25,0:25:74.95:0,75,864	0/0:13,0:13:30.02:0,30,433
chr10	80006634	.	C	CTT	3807.56	PASS	AB=0.804;AC=22;AF=0.393;AN=56;BaseQRankSum=-1.857;DP=494;FS=9.611;HRun=10;HaplotypeScore=63.2711;InbreedingCoeff=0.8195;MQ=76.86;MQ0=2;MQRankSum=1.988;QD=22.40;ReadPosRankSum=1.549;VQSLOD=2.1995;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,8:11:15.05:222,15,0	0/0:2,0:2:6.01:0,6,61	0/1:15,0:12:10.22:10,0,79	0/0:13,0:12:1.30:0,1,51	0/0:38,0:41:77.33:0,77,950	1/1:1,12:14:32.60:456,33,0	0/0:19,0:19:54.08:0,54,541	0/0:32,0:32:66.09:0,66,659	0/0:18,0:18:36.02:0,36,366	0/0:20,0:20:54.09:0,54,549	0/0:16,0:17:35.77:0,36,347	1/1:4,11:16:32.60:455,33,0	1/1:1,2:4:8.52:98,9,0	1/1:1,15:18:29.07:374,29,0	0/0:18,0:19:41.77:0,42,463	0/0:11,0:11:24.02:0,24,244	0/0:17,0:18:41.76:0,42,394	0/0:16,0:17:29.76:0,30,346	0/0:23,0:23:30.37:0,30,467	0/0:24,0:24:60.07:0,60,610	0/0:12,0:12:30.05:0,30,305	1/1:2,8:10:27:346,27,0	1/1:4,16:20:45.15:668,45,0	1/1:1,9:11:24.08:357,24,0	1/1:3,13:19:41.63:568,42,0	1/1:3,1:18:24.33:152,24,0	0/0:38,0:38:90.11:0,90,906	0/1:5,1:14:4.17:101,0,4
chr10	80007095	.	TA	T	1494.15	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.032;DP=757;FS=2.059;HRun=1;HaplotypeScore=71.6386;InbreedingCoeff=0.9985;MQ=85.23;MQ0=0;MQRankSum=-4.463;QD=36.44;ReadPosRankSum=-1.836;VQSLOD=3.3042;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:41:99:1589,114,0	0/0:15,0:15:45.15:0,45,716	0/0:32,0:32:96.32:0,96,1500	0/0:25,0:25:64.60:0,65,968	0/0:35,0:35:99:0,105,1656	0/0:28,0:28:78.27:0,78,1241	0/0:31,0:31:93.30:0,93,1456	0/0:21,0:21:63.20:0,63,963	0/0:32,0:32:96.27:0,96,1481	0/0:29,0:29:87.29:0,87,1370	0/0:26,0:26:78.27:0,78,1245	0/0:26,0:26:78.22:0,78,1176	0/0:29,0:29:87.30:0,87,1391	0/0:30,0:30:90.29:0,90,1413	0/0:27,0:27:81.28:0,81,1293	0/0:22,0:22:66.23:0,66,1054	0/0:30,0:30:87.30:0,87,1387	0/0:10,0:10:27.09:0,27,425	0/0:17,0:17:51.17:0,51,815	0/0:27,0:27:81.28:0,81,1295	0/0:29,0:29:87.30:0,87,1386	0/0:25,0:25:75.26:0,75,1197	0/0:28,0:28:84.29:0,84,1342	0/0:34,0:34:99:0,102,1602	0/0:30,0:29:90.27:0,90,1370	0/0:33,0:33:96.33:0,96,1529	0/0:34,0:34:99:0,99,1559	0/0:11,0:11:30.10:0,30,479
chr10	80008021	.	ATGTG	A	1017.29	PASS	AB=1.000;AC=29;AF=0.630;AN=46;BaseQRankSum=2.748;DP=544;FS=0.000;HRun=0;HaplotypeScore=102.0346;InbreedingCoeff=0.5276;MQ=62.90;MQ0=9;MQRankSum=-0.050;QD=3.74;ReadPosRankSum=0.873;VQSLOD=1.5248;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:7,0:8:6.01:67,6,0	./.	./.	1/1:6,4:10:3.01:46,3,0	0/0:15,0:16:8.52:0,9,121	0/0:17,0:17:7.52:0,8,160	0/0:30,0:28:2.29:0,2,5	1/1:21,1:24:11.54:164,12,0	1/1:27,0:25:2.93:28,3,0	./.	1/1:16,3:19:5.13:90,5,0	1/1:21,0:21:6.02:92,6,0	1/1:28,0:28:9.02:117,9,0	1/1:12,3:15:5.81:91,6,0	1/1:15,3:20:9.02:120,9,0	0/1:24,0:24:27.31:27,0,304	1/1:17,1:16:9.02:117,9,0	0/0:19,0:18:6.02:0,6,101	0/0:15,0:15:12.04:0,12,230	0/0:28,0:27:15.04:0,15,227	1/1:22,0:22:6.01:71,6,0	1/1:16,0:16:3:25,3,0	1/1:9,1:12:6.01:74,6,0	0/0:20,0:23:4.72:0,5,17	./.	0/0:20,0:20:9.02:0,9,136	1/1:6,2:8:3.01:46,3,0
chr10	80011064	.	C	CCAAT	4519.87	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-10.368;DP=520;FS=1.075;HRun=0;HaplotypeScore=83.0976;InbreedingCoeff=0.9666;MQ=76.44;MQ0=0;MQRankSum=-0.613;QD=43.05;ReadPosRankSum=1.768;VQSLOD=5.1124;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,7:12:21.07:509,21,0	0/0:9,0:9:18.04:0,18,244	0/0:11,0:11:9.03:0,9,146	0/0:28,0:26:36.08:0,36,525	0/0:26,0:26:57.17:0,57,860	0/0:22,0:22:54.17:0,54,839	0/0:14,0:14:21.06:0,21,308	0/0:33,0:33:45.15:0,45,717	0/0:13,0:13:33.11:0,33,535	0/0:24,0:24:39.13:0,39,598	0/0:25,0:25:54.14:0,54,835	1/1:5,14:18:39.13:928,39,0	1/1:6,14:20:39.13:944,39,0	1/1:7,10:18:27.09:654,27,0	0/0:25,0:26:48.16:0,48,755	0/0:19,0:19:45.15:0,45,723	0/0:6,0:6:9.03:0,9,146	0/0:12,0:12:24.08:0,24,383	0/0:12,0:12:30.10:0,30,485	0/0:30,0:30:66.21:0,66,1027	0/0:22,0:22:57.19:0,57,924	1/1:2,6:8:12.04:215,12,0	1/1:8,8:16:27.09:616,27,0	1/1:3,9:12:27.09:654,27,0	0/0:25,0:25:57.19:0,57,924	0/0:25,0:25:57.19:0,57,919	0/0:24,0:24:57.16:0,57,868	0/0:9,0:9:15.05:0,15,240
chr10	80011311	.	A	AT	219.31	PASS	AB=0.900;AC=3;AF=0.056;AN=54;BaseQRankSum=-3.696;DP=366;FS=8.818;HRun=8;HaplotypeScore=35.9153;InbreedingCoeff=0.5609;MQ=64.08;MQ0=0;MQRankSum=0.450;QD=11.54;ReadPosRankSum=-0.294;VQSLOD=0.9462;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:10:27.08:312,27,0	0/0:12,0:12:35.96:0,36,312	0/0:2,0:2:3:0,3,27	./.	0/0:24,0:24:66.02:0,66,600	0/0:20,0:21:56.06:0,56,500	0/0:6,0:6:15.01:0,15,137	0/0:22,0:22:63.03:0,63,577	0/1:8,1:9:6.54:7,0,193	0/0:21,0:21:57.02:0,57,522	0/0:18,0:18:45.02:0,45,412	0/0:16,0:16:29.83:0,30,394	0/0:13,0:13:36.02:0,36,329	0/0:12,0:12:33.01:0,33,302	0/0:12,0:12:33.02:0,33,302	0/0:9,0:9:27.01:0,27,247	0/0:8,0:8:24.01:0,24,220	0/0:6,0:6:9:0,9,82	0/0:16,0:16:42.02:0,42,384	0/0:26,0:26:75.03:0,75,682	0/0:8,0:8:17.97:0,18,157	0/0:6,0:6:14.98:0,15,131	0/0:15,0:15:42.02:0,42,384	0/0:7,0:7:18.01:0,18,165	0/0:18,0:19:56.07:0,56,500	0/0:20,0:20:60.02:0,60,546	0/0:19,0:19:48.02:0,48,439	0/0:5,0:5:15.01:0,15,137
chr10	80012450	.	T	TTCTCTCTCTC	1983.06	PASS	AB=0.922;AC=14;AF=0.250;AN=56;BaseQRankSum=5.547;DP=562;FS=3.679;HRun=0;HaplotypeScore=195.4806;InbreedingCoeff=0.2203;MQ=56.11;MQ0=20;MQRankSum=-3.571;QD=9.35;ReadPosRankSum=-0.504;VQSLOD=2.7140;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:22.07:165,0,22	0/0:9,0:9:15.05:0,15,436	0/0:36,0:18:36.10:0,36,936	0/0:37,0:18:30.01:0,30,681	0/0:25,0:25:42.04:0,42,1255	0/1:15,13:27:0:0,0,0	0/0:15,0:14:26.76:0,27,745	0/0:24,0:24:30.06:0,30,692	0/0:14,0:14:18.06:0,18,534	0/0:24,0:24:57.19:0,57,1660	0/0:17,0:17:36.12:0,36,1011	0/1:18,0:18:31.02:58,0,31	0/1:18,0:16:49.90:113,0,50	1/1:16,0:16:5.49:69,5,0	0/0:23,0:22:21.07:0,21,598	0/0:22,0:21:51.16:0,51,1412	0/0:22,0:21:35.98:0,36,844	0/0:8,0:8:9.03:0,9,232	0/0:16,0:16:21.03:0,21,554	0/0:23,0:23:42:0,42,1035	0/0:16,0:15:21.05:0,21,562	0/1:17,0:16:67.42:161,0,67	0/1:24,0:23:18.96:241,0,19	0/1:13,0:13:50.18:85,0,50	1/1:25,0:24:2.78:89,3,0	0/1:13,0:23:5.30:970,0,5	0/0:19,0:19:45.14:0,45,1239	1/1:9,0:8:5.97:185,6,0
chr10	80012468	.	CTG	C	1045.20	PASS	AB=0.887;AC=36;AF=0.750;AN=48;BaseQRankSum=2.385;DP=560;FS=3.320;HRun=0;HaplotypeScore=123.1184;InbreedingCoeff=0.0262;MQ=48.42;MQ0=27;MQRankSum=-0.867;QD=2.50;ReadPosRankSum=2.001;VQSLOD=1.8327;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:9,0:9:5.78:46,6,0	./.	./.	1/1:20,9:29:2.99:23,3,0	1/1:23,0:22:5.81:32,6,0	0/0:24,0:23:0.04:0,0,126	./.	1/1:12,0:16:2.52:14,3,0	0/1:32,0:31:7.19:116,0,7	1/1:16,1:17:14.97:126,15,0	1/1:18,0:18:17.04:84,17,0	1/1:16,0:14:11.36:56,11,0	1/1:15,0:15:5.44:24,5,0	0/1:11,12:24:40.27:51,0,40	1/1:19,1:24:17.70:124,18,0	0/1:24,0:21:45.79:46,0,258	0/0:5,0:5:0:0,0,0	1/1:13,0:13:2.95:25,3,0	1/1:15,1:24:8.80:65,9,0	0/1:12,7:18:18.93:26,0,19	1/1:17,0:16:12.40:59,12,0	1/1:16,0:15:10.90:55,11,0	1/1:11,0:11:2.84:14,3,0	0/1:19,0:19:0:0,0,0	0/1:21,0:21:40.51:45,0,41	1/1:14,12:27:14.75:135,15,0	0/0:6,0:4:0.47:0,0,1
chr10	80012486	.	GTGTGTGTGTGTGTGT	G	2273.45	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=7.854;DP=552;FS=3.698;HRun=0;HaplotypeScore=192.8519;InbreedingCoeff=0.7917;MQ=45.14;MQ0=38;MQRankSum=-7.154;QD=20.30;ReadPosRankSum=4.253;VQSLOD=2.5257;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:19:16.85:0,17,216	0/0:7,0:7:15.05:0,15,549	0/0:19,0:6:18.05:0,18,220	0/0:31,0:6:15.05:0,15,187	0/0:27,0:27:38.77:0,39,1393	0/0:26,0:25:17.98:0,18,237	0/0:23,0:22:48.23:0,48,2391	0/0:19,0:18:54.18:0,54,1593	0/0:17,0:17:18.53:0,19,367	0/0:38,0:37:99:0,109,3892	0/0:19,0:18:48.16:0,48,2050	1/1:14,1:16:23.39:690,23,0	1/1:17,1:17:15.05:467,15,0	1/1:13,0:14:6.02:222,6,0	0/0:29,0:27:19.65:0,20,1190	0/0:21,0:20:47.79:0,48,1880	0/0:25,0:22:63.21:0,63,3391	0/0:7,0:7:21.07:0,21,809	0/0:9,0:8:24.07:0,24,718	0/0:25,0:25:42.61:0,43,1577	0/0:22,0:18:24.08:0,24,912	1/1:12,8:18:17.81:579,18,0	1/1:14,0:13:5.08:375,5,0	1/1:6,0:6:3.01:96,3,0	0/1:22,0:21:15.76:16,0,126	0/0:22,0:22:55.96:0,56,1683	0/0:26,0:24:40.08:0,40,1442	0/0:6,0:4:12.04:0,12,172
chr10	80012488	.	GTGTGTGTGTGTGT	G	2620.16	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=8.280;DP=561;FS=8.295;HRun=0;HaplotypeScore=181.0798;InbreedingCoeff=0.7294;MQ=45.13;MQ0=40;MQRankSum=-6.131;QD=17.47;ReadPosRankSum=3.115;VQSLOD=1.3518;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:19:17.18:0,17,211	0/0:7,0:7:15.03:0,15,471	0/0:16,0:5:15.04:0,15,178	0/0:29,0:5:15.05:0,15,185	0/0:28,0:28:41.92:0,42,1213	0/1:27,0:26:13.25:13,0,185	0/0:23,0:22:48.21:0,48,2074	0/0:19,0:18:54.18:0,54,1330	0/0:16,0:16:18.53:0,19,313	0/0:39,0:38:99:0,112,3231	0/0:20,0:19:51.08:0,51,1770	1/1:12,6:19:19.36:793,19,0	1/1:7,13:17:15.05:510,15,0	1/1:4,10:13:6.02:214,6,0	0/0:28,0:26:20.93:0,21,981	0/0:20,0:19:44.72:0,45,1540	0/0:27,0:24:69.23:0,69,2997	0/0:7,0:7:21.07:0,21,691	0/0:8,0:7:21.07:0,21,598	0/0:26,0:26:45.62:0,46,1385	0/0:21,0:17:21.05:0,21,710	1/1:17,2:18:17.81:565,18,0	1/1:7,6:15:17.13:540,17,0	1/1:8,2:11:3.01:125,3,0	0/1:21,0:20:37.56:38,0,93	0/0:23,0:23:27.63:0,28,1339	0/0:26,0:24:39.10:0,39,1171	0/0:6,0:4:12.04:0,12,156
chr10	80012500	.	GT	G	424.17	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=7.783;DP=522;FS=1.577;HRun=1;HaplotypeScore=112.0496;InbreedingCoeff=0.9049;MQ=45.89;MQ0=33;MQRankSum=-6.275;QD=4.61;ReadPosRankSum=2.851;VQSLOD=0.6015;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:15:15.44:0,15,141	0/0:4,0:4:8.17:0,8,58	./.	0/0:20,0:6:14.82:0,15,181	0/0:26,0:26:35.88:0,36,417	0/0:26,0:25:29.42:0,29,343	0/0:21,0:20:40.44:0,40,546	0/0:19,0:18:54.16:0,54,669	0/0:14,0:14:15.93:0,16,191	0/0:34,0:33:93.85:0,94,1061	0/0:19,0:18:46.49:0,46,460	1/1:13,4:17:23.62:158,24,0	1/1:18,1:15:9.12:75,9,0	1/1:10,1:10:6.01:62,6,0	0/0:28,0:26:28.61:0,29,304	0/0:19,0:18:38.26:0,38,371	0/0:30,0:26:74.65:0,75,949	0/0:8,0:8:24.08:0,24,299	0/0:10,0:9:23.86:0,24,248	0/0:26,0:26:45.64:0,46,515	0/0:21,0:17:20.27:0,20,236	1/1:15,2:14:16.10:91,16,0	1/1:13,3:15:20.83:164,21,0	1/1:6,6:10:5.96:45,6,0	0/0:18,0:17:12.02:0,12,136	0/0:23,0:23:57.25:0,57,668	0/0:25,0:23:31.64:0,32,283	0/0:8,0:6:14.96:0,15,154
chr10	80012585	.	C	CT	4033.94	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-7.534;DP=520;FS=0.000;HRun=6;HaplotypeScore=50.3846;InbreedingCoeff=0.9937;MQ=81.46;MQ0=4;MQRankSum=-0.619;QD=32.80;ReadPosRankSum=2.339;VQSLOD=3.7410;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:78.25:981,78,0	0/0:17,0:17:51.11:0,51,520	0/0:20,0:19:21.37:0,21,339	0/0:11,0:11:26.26:0,26,242	0/0:26,0:26:75.15:0,75,757	0/0:23,0:23:57.13:0,57,581	0/0:16,0:16:48.08:0,48,477	0/0:29,0:29:66.11:0,66,656	0/0:9,0:9:24.05:0,24,245	0/0:24,0:24:63.10:0,63,631	0/0:27,0:27:78.17:0,78,796	1/1:0,15:15:45.14:566,45,0	1/1:5,12:16:42.08:498,42,0	1/1:1,12:12:36.12:453,36,0	0/0:22,0:22:60.12:0,60,605	0/0:25,0:25:72.15:0,72,727	0/0:20,0:20:48.11:0,48,489	0/0:10,0:10:24.05:0,24,245	0/0:15,0:15:45.10:0,45,459	0/0:24,0:24:66.14:0,66,667	0/0:12,0:12:33.06:0,33,329	1/1:3,5:7:18.06:226,18,0	1/1:3,22:24:63.19:781,63,0	1/1:1,14:14:42.13:528,42,0	0/0:28,0:28:75.16:0,75,765	0/0:25,0:25:63.14:0,63,643	0/0:9,0:9:27.06:0,27,275	0/0:5,0:5:15.03:0,15,151
chr10	80013127	.	TA	T	2786.52	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.356;DP=354;FS=0.489;HRun=7;HaplotypeScore=40.3234;InbreedingCoeff=0.9528;MQ=72.82;MQ0=0;MQRankSum=-2.354;QD=24.88;ReadPosRankSum=3.301;VQSLOD=3.5538;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:30.07:306,30,0	0/0:8,0:8:21.05:0,21,252	0/0:4,0:4:12:0,12,120	0/0:8,0:8:6.68:0,7,95	0/0:27,0:27:78.06:0,78,917	1/1:0,18:18:48.11:489,48,0	0/0:2,0:2:6.02:0,6,76	0/0:26,0:26:67.06:0,67,779	0/0:9,0:9:27.09:0,27,341	0/0:16,0:16:42.12:0,42,509	0/0:21,0:21:57.17:0,57,706	1/1:1,12:13:35.87:349,36,0	1/1:0,11:11:24.05:245,24,0	1/1:0,13:13:33.08:336,33,0	0/0:12,0:12:36.09:0,36,428	0/0:3,0:3:9.03:0,9,113	0/0:18,0:18:51.15:0,51,630	0/0:18,0:18:48.09:0,48,572	0/0:11,0:11:27.09:0,27,340	0/0:10,0:10:30.10:0,30,378	0/0:9,0:9:27.05:0,27,303	1/1:0,11:11:33.04:326,33,0	1/1:0,14:14:36.08:367,36,0	1/1:0,6:6:18.04:184,18,0	1/1:0,15:15:39.09:398,39,0	0/0:14,0:14:39.08:0,39,443	0/0:14,0:14:42.12:0,42,516	0/0:12,0:12:36.12:0,36,454
chr10	80015725	.	GAA	G	1941.10	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=1.149;DP=649;FS=7.267;HRun=14;HaplotypeScore=97.6868;InbreedingCoeff=0.9668;MQ=74.75;MQ0=2;MQRankSum=1.435;QD=16.18;ReadPosRankSum=5.345;VQSLOD=2.7088;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:46.86:0,47,506	0/0:10,0:11:29.59:0,30,384	0/0:48,0:27:45.86:0,46,453	0/0:33,0:18:11.58:0,12,138	0/0:24,0:27:66.92:0,67,828	0/0:27,0:30:71.08:0,71,815	0/0:13,1:14:8.34:0,8,410	0/0:30,0:34:71.03:0,71,809	0/0:13,0:14:42.13:0,42,562	0/0:24,0:26:47.10:0,47,553	0/0:27,1:30:40.37:0,40,750	1/1:3,10:14:13.98:137,14,0	1/1:1,16:17:45.05:416,45,0	1/1:3,16:19:30.03:325,30,0	0/0:20,1:24:31.92:0,32,621	0/0:17,0:18:47.23:0,47,610	0/0:16,0:17:10.69:0,11,492	0/0:23,0:27:64.54:0,65,770	0/0:6,0:14:24.66:0,25,264	0/0:18,0:30:69.02:0,69,645	0/0:9,0:17:47.52:0,48,403	1/1:7,20:30:51.90:518,52,0	1/1:2,13:16:41.78:370,42,0	1/1:7,17:24:39.01:361,39,0	0/0:13,0:15:37.92:0,38,429	0/0:10,0:27:62.71:0,63,590	0/0:12,0:35:48.57:0,49,527	0/0:7,0:13:33.50:0,34,280
chr10	80018108	.	A	AG	11106.54	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-17.664;DP=637;FS=0.963;HRun=0;HaplotypeScore=56.2443;InbreedingCoeff=0.9988;MQ=72.73;MQ0=0;MQRankSum=-5.651;QD=42.88;ReadPosRankSum=4.821;VQSLOD=5.1168;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:63.21:993,63,0	0/0:15,0:15:45.14:0,45,611	0/0:19,0:19:54.12:0,54,706	0/0:14,0:14:36.06:0,36,445	0/0:39,0:39:99:0,111,1513	1/1:0,44:43:99:2014,126,0	0/0:23,0:23:69.23:0,69,964	0/0:18,0:18:51.17:0,51,713	0/0:15,0:15:45.15:0,45,627	0/0:28,0:28:81.25:0,81,1099	0/0:30,0:30:90.15:0,90,1209	1/1:1,23:24:60.20:959,60,0	1/1:0,26:26:78.27:1247,78,0	1/1:0,19:19:54.18:863,54,0	0/0:21,0:21:60.20:0,60,838	0/0:18,0:18:54.18:0,54,753	0/0:25,0:25:69.67:0,70,944	0/0:15,0:15:42.14:0,42,587	0/0:17,0:17:51.17:0,51,713	0/0:35,0:35:99:0,102,1373	0/0:19,0:19:57.18:0,57,775	1/1:1,25:26:69.24:1102,69,0	1/1:2,27:29:72.03:1105,72,0	1/1:0,19:19:54.18:863,54,0	1/1:2,23:25:57.19:911,57,0	1/1:0,16:16:48.16:762,48,0	0/0:27,0:27:81.23:0,81,1109	1/1:0,6:6:18.06:288,18,0
chr10	80018820	.	T	TAGGCGTTGGATAG	35705.22	PASS	AB=0.969;AC=23;AF=0.411;AN=56;BaseQRankSum=-0.885;DP=707;FS=1.319;HRun=0;HaplotypeScore=248.1312;InbreedingCoeff=0.9245;MQ=60.74;MQ0=0;MQRankSum=-19.613;QD=118.23;ReadPosRankSum=-0.300;VQSLOD=4.5734;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,17:29:78.27:4288,78,0	0/0:6,0:6:18.06:0,18,719	0/0:36,0:35:87.28:0,87,2647	0/0:27,0:27:72.20:0,72,2372	0/0:36,0:36:99:0,102,3481	1/1:13,7:25:57.20:2604,57,0	0/0:20,0:19:51.16:0,51,1883	0/0:39,0:39:99:0,99,3198	0/0:17,0:17:51.16:0,51,1894	0/1:30,1:31:99:104,0,3108	0/0:16,0:16:42.11:0,42,1487	1/1:12,11:26:66.23:3731,66,0	1/1:14,9:28:60.21:3345,60,0	1/1:8,13:23:60.21:3361,60,0	0/0:30,0:30:84.25:0,84,2927	0/0:21,0:21:60.21:0,60,2289	0/0:25,0:25:66.16:0,66,2227	0/0:17,0:16:49.72:0,50,1799	0/0:20,0:20:54.17:0,54,1728	0/0:32,0:32:96.30:0,96,3499	0/0:27,0:27:72.23:0,72,2650	1/1:14,7:23:57.20:2677,57,0	1/1:9,15:27:69.24:3972,69,0	1/1:12,8:21:51.17:2551,51,0	1/1:17,14:34:87.30:4559,87,0	1/1:9,12:25:72.20:3471,72,0	0/0:36,0:36:99:0,102,3716	1/1:5,2:10:21.07:1042,21,0
chr10	80019473	.	CTCT	C	149.75	PASS	AB=0.911;AC=5;AF=0.132;AN=38;BaseQRankSum=4.015;DP=231;FS=0.000;HRun=0;HaplotypeScore=21.6706;InbreedingCoeff=0.0653;MQ=23.95;MQ0=149;MQRankSum=-2.428;QD=6.24;ReadPosRankSum=0.036;VQSLOD=1.4257;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:8:9.68:0,10,127	1/1:1,3:4:12.04:184,12,0	./.	./.	./.	0/0:8,0:4:8.90:0,9,79	0/0:19,0:4:2.72:0,3,24	0/0:28,0:3:7.58:0,8,90	0/1:7,0:4:15.96:16,0,77	0/0:9,1:3:7.82:0,8,59	0/1:5,1:4:9.96:10,0,39	./.	./.	./.	0/0:9,0:4:7.58:0,8,92	0/0:4,0:2:6.01:0,6,69	0/0:5,0:1:3.01:0,3,44	0/0:4,0:2:5.91:0,6,38	0/0:11,0:4:12.03:0,12,152	0/0:4,0:2:6.02:0,6,88	0/0:30,0:4:6:0,6,64	./.	./.	./.	0/0:12,0:6:11.73:0,12,100	0/0:10,0:1:3.01:0,3,44	0/0:5,0:3:8.97:0,9,87	0/1:6,1:3:38.09:45,0,38
chr10	80019506	.	TCC	T	399.44	PASS	AB=0.833;AC=16;AF=0.444;AN=36;BaseQRankSum=3.456;DP=182;FS=0.000;HRun=2;HaplotypeScore=29.9820;InbreedingCoeff=0.2783;MQ=17.37;MQ0=105;MQRankSum=0.509;QD=6.89;ReadPosRankSum=0.561;VQSLOD=-0.1213;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:3:3.86:0,4,23	1/1:2,3:4:5.47:129,5,0	./.	./.	1/1:11,2:9:3.15:17,3,0	0/1:7,0:2:10.54:11,0,39	0/0:16,0:4:5.01:0,5,62	0/0:20,0:3:9.03:0,9,127	1/1:1,1:2:0.99:42,1,0	0/0:10,1:5:5.37:0,5,89	1/1:6,6:8:15.72:108,16,0	./.	./.	./.	1/1:3,2:4:0.28:116,0,0	0/1:1,1:2:32.16:40,0,32	./.	0/0:4,0:2:6.02:0,6,104	0/0:7,0:1:3.01:0,3,46	1/1:8,2:5:3.48:30,3,0	./.	0/0:4,0:1:3.01:0,3,46	./.	./.	0/0:6,0:2:1.25:0,1,3	0/0:5,1:2:3.01:0,3,58	1/1:0,2:2:3:26,3,0	./.
chr10	80021106	.	T	TCTTTATTTA	5677.36	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-6.998;DP=529;FS=3.542;HRun=0;HaplotypeScore=137.3735;InbreedingCoeff=0.9312;MQ=80.25;MQ0=0;MQRankSum=-9.094;QD=69.24;ReadPosRankSum=-0.322;VQSLOD=4.7895;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,7:13:21.07:765,21,0	0/0:2,0:2:6.02:0,6,174	0/0:15,0:15:23:0,23,421	0/0:22,0:22:26.02:0,26,796	0/0:31,0:31:81.23:0,81,2084	1/1:9,11:21:27.09:1267,27,0	0/0:20,0:20:45.15:0,45,1232	0/0:35,0:35:84.27:0,84,2203	0/0:17,0:17:51.15:0,51,1313	0/0:33,0:33:75.25:0,75,2058	0/0:24,0:23:66.22:0,66,1732	0/0:23,0:23:63.22:0,63,1733	0/0:10,0:10:27.08:0,27,693	0/0:21,0:21:57.20:0,57,1615	0/0:27,0:27:66.23:0,66,1903	0/0:17,0:17:45.15:0,45,1254	0/0:16,0:16:45.15:0,45,1199	0/0:16,0:16:39.13:0,39,1105	0/0:25,0:25:51.17:0,51,1321	0/0:18,0:18:45.15:0,45,1245	0/0:11,0:11:24.08:0,24,646	0/0:17,0:17:45.15:0,45,1276	0/0:14,0:14:39.13:0,39,1104	0/0:11,0:11:27.09:0,27,784	1/1:4,14:20:30.10:1338,30,0	1/1:12,15:27:54.18:2167,54,0	0/0:22,0:22:60.19:0,60,1628	1/1:0,1:1:3.01:141,3,0
chr10	80021852	.	GA	G	824.94	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.015;DP=542;FS=4.438;HRun=7;HaplotypeScore=52.5649;InbreedingCoeff=0.9636;MQ=79.56;MQ0=0;MQRankSum=1.279;QD=21.71;ReadPosRankSum=2.048;VQSLOD=3.3186;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:18.05:0,18,214	0/0:9,0:9:24.05:0,24,275	0/0:34,0:28:45.18:0,45,561	0/0:23,0:15:32.83:0,33,326	0/0:25,0:25:60.17:0,60,728	0/0:19,0:19:54.16:0,54,663	0/0:12,0:12:36.11:0,36,440	0/0:34,0:34:90.24:0,90,1055	0/0:17,0:17:42.13:0,42,526	0/0:21,0:21:57.18:0,57,713	0/0:35,0:35:93.27:0,93,1129	0/0:11,0:11:33.09:0,33,400	0/0:21,0:21:60.19:0,60,749	0/0:23,0:23:63.14:0,63,738	0/0:13,0:13:39.11:0,39,475	0/0:14,0:14:39.12:0,39,488	0/0:21,0:21:54.16:0,54,663	0/0:3,0:3:8.99:0,9,96	0/0:23,0:23:62.90:0,63,710	0/0:32,0:32:93.29:0,93,1151	0/0:12,0:12:33.11:0,33,413	0/0:17,0:17:48.15:0,48,597	0/0:19,0:19:54.14:0,54,638	0/0:10,0:10:27.09:0,27,337	0/0:19,0:19:48.15:0,48,601	1/1:4,23:27:69.15:702,69,0	0/0:30,0:30:81.23:0,81,977	1/1:3,8:11:24.05:244,24,0
chr10	80022693	.	T	TAATC	2489.33	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-2.442;DP=447;FS=1.606;HRun=0;HaplotypeScore=89.3056;InbreedingCoeff=0.9801;MQ=82.47;MQ0=0;MQRankSum=-5.901;QD=56.58;ReadPosRankSum=2.665;VQSLOD=5.1420;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,8:11:24.08:598,24,0	0/0:9,0:9:27.09:0,27,513	0/0:14,0:14:39.13:0,39,710	0/0:13,0:13:36.08:0,36,622	0/0:14,0:14:29.72:0,30,569	1/1:5,15:21:54.19:1387,54,0	0/0:6,0:6:18.04:0,18,302	0/0:37,0:37:99:0,105,1946	0/0:14,0:14:39.12:0,39,709	0/0:14,0:14:42.10:0,42,752	0/0:14,0:14:32.87:0,33,619	0/0:9,0:9:27.09:0,27,513	0/0:17,0:17:45.15:0,45,847	0/0:23,0:23:66.23:0,66,1252	0/0:20,0:20:54.17:0,54,992	0/0:16,0:16:48.16:0,48,911	0/0:14,0:14:36.12:0,36,682	0/0:10,0:10:30.10:0,30,569	0/0:23,0:23:60.20:0,60,1082	0/0:21,0:21:57.20:0,57,1081	0/0:23,0:23:69.19:0,69,1234	0/0:12,0:12:23.85:0,24,456	0/0:19,0:19:18.53:0,19,342	0/0:11,0:11:33.11:0,33,603	1/1:3,9:12:24.08:646,24,0	0/0:19,0:19:51.17:0,51,968	0/0:26,0:26:75.26:0,75,1380	0/0:5,0:5:12.04:0,12,221
chr10	80023016	.	CCAGAGGAA	C	3916.30	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.944;DP=609;FS=5.465;HRun=0;HaplotypeScore=149.2483;InbreedingCoeff=0.9875;MQ=81.48;MQ0=0;MQRankSum=-11.241;QD=66.38;ReadPosRankSum=2.875;VQSLOD=3.7519;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,11:15:30.10:844,30,0	0/0:16,0:16:48.16:0,48,2107	0/0:20,0:20:57.20:0,57,2337	0/0:20,0:20:54.19:0,54,2134	0/0:31,0:31:90.29:0,90,3798	1/1:2,27:29:72.21:1971,72,0	0/0:20,0:20:60.19:0,60,2551	0/0:23,0:23:66.21:0,66,2592	0/0:18,0:18:54.19:0,54,2333	0/0:27,0:27:81.28:0,81,3404	0/0:19,0:19:57.20:0,57,2332	0/0:22,0:22:63.22:0,63,2750	0/0:25,0:25:72.25:0,72,3079	0/0:23,0:23:66.23:0,66,2908	0/0:28,0:28:84.29:0,84,3645	0/0:23,0:23:66.23:0,66,2924	0/0:24,0:24:72.23:0,72,3053	0/0:7,0:7:21.07:0,21,886	0/0:22,0:22:60.20:0,60,2550	0/0:42,0:42:99:0,126,5553	0/0:15,0:15:42.14:0,42,1774	0/0:29,0:29:87.30:0,87,3823	0/0:31,0:31:93.31:0,93,3879	0/0:20,0:20:60.21:0,60,2659	1/1:0,15:15:39.13:1102,39,0	0/0:16,0:16:48.16:0,48,1965	0/0:25,0:23:72.19:0,72,2815	0/0:4,0:4:12.04:0,12,532
chr10	80024342	.	GTCTC	G	1177.66	PASS	AB=0.765;AC=4;AF=0.071;AN=56;BaseQRankSum=7.565;DP=871;FS=0.000;HRun=0;HaplotypeScore=175.4436;InbreedingCoeff=0.3989;MQ=74.30;MQ0=21;MQRankSum=-2.310;QD=22.65;ReadPosRankSum=0.123;VQSLOD=3.2811;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:99:0,99,2442	0/0:6,0:6:12.04:0,12,317	0/0:103,0:52:65.66:0,66,1430	0/0:137,0:57:45.19:0,45,935	0/0:24,0:24:60.18:0,60,1469	0/0:28,0:28:63.19:0,63,1506	0/0:17,0:17:41.74:0,42,988	0/0:39,0:39:99:0,102,2384	0/0:23,0:23:59.85:0,60,1572	0/0:33,0:33:96.27:0,96,2349	0/0:16,0:16:42.13:0,42,1054	0/0:17,0:17:12:0,12,462	0/1:19,0:19:3.19:3,0,451	0/0:17,0:17:26.43:0,26,492	0/0:28,0:28:75.24:0,75,1875	0/0:29,0:29:84.19:0,84,1850	0/0:25,0:25:54.39:0,54,1523	0/0:21,0:20:51.18:0,51,1329	0/0:23,0:23:60.15:0,60,1336	0/0:20,0:20:54.17:0,54,1293	0/0:48,0:47:99:0,126,3237	0/0:27,0:27:2.58:0,3,24	0/0:12,0:12:2.99:0,3,23	0/0:33,0:33:48.04:0,48,831	0/0:15,0:15:27.08:0,27,632	0/1:2,16:18:28.10:786,0,28	0/0:32,0:32:96.28:0,96,2256	1/1:3,12:13:27.04:496,27,0
chr10	80024347	.	TCTCTATCTCTGTCTCTGACTCTGTCTCC	T	2797.79	PASS	AB=0.762;AC=12;AF=0.214;AN=56;BaseQRankSum=5.280;DP=825;FS=21.070;HRun=0;HaplotypeScore=462.8733;InbreedingCoeff=0.7987;MQ=73.56;MQ0=19;MQRankSum=-0.672;QD=20.88;ReadPosRankSum=-4.592;VQSLOD=-0.0731;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:99:0,102,2282	0/0:4,0:4:12.04:0,12,617	0/0:94,0:49:33.14:0,33,1340	0/0:126,0:53:44.96:0,45,1071	0/0:22,0:22:62.20:0,62,1756	0/0:29,0:29:60.10:0,60,1582	0/0:18,0:18:45.14:0,45,1096	0/0:36,0:36:96.23:0,96,2320	0/0:23,0:23:64.97:0,65,2373	0/0:33,0:33:93.30:0,93,4025	0/0:15,0:15:42.14:0,42,1737	1/1:17,0:17:39.06:726,39,0	1/1:18,0:18:33.84:589,34,0	1/1:14,0:14:26.55:510,27,0	0/0:25,0:25:75.23:0,75,3036	0/0:30,0:30:78.23:0,78,2875	0/0:23,0:23:61.63:0,62,2022	0/0:20,0:19:54.16:0,54,1839	0/0:21,0:21:57.15:0,57,1908	0/0:18,0:18:51.13:0,51,1755	0/0:46,0:45:99:0,129,5761	1/1:1,25:26:1.55:4,2,0	0/1:1,10:11:0:0,0,0	1/1:30,0:30:43.47:1027,43,0	0/0:14,0:14:24:0,24,1113	0/1:18,0:18:99:105,0,526	0/0:35,0:35:99:0,99,3524	0/0:14,0:13:9.83:0,10,620
chr10	80024348	.	CTCTA	C	745.76	PASS	AB=0.902;AC=8;AF=0.148;AN=54;BaseQRankSum=8.930;DP=825;FS=2.877;HRun=0;HaplotypeScore=165.5026;InbreedingCoeff=0.2355;MQ=73.55;MQ0=18;MQRankSum=-2.503;QD=5.40;ReadPosRankSum=-1.442;VQSLOD=2.5340;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:99:0,102,2479	0/0:4,0:4:12.04:0,12,324	0/0:92,0:48:76.98:0,77,1455	0/0:130,0:56:32.61:0,33,1024	0/0:22,0:22:60.20:0,60,1495	0/0:30,0:30:63.11:0,63,1446	0/0:18,0:18:47.67:0,48,1031	0/0:36,0:36:96.31:0,96,2343	0/0:23,0:23:62.86:0,63,1631	0/0:32,0:32:93.32:0,93,2403	0/0:15,0:15:42.14:0,42,1099	0/1:15,2:17:46.33:46,0,327	0/1:16,4:20:96.02:96,0,296	0/1:10,4:14:6.08:6,0,313	0/0:25,0:25:75.24:0,75,1913	0/0:30,0:30:81.26:0,81,1929	0/0:23,0:23:44.87:0,45,1506	0/0:20,0:19:51.17:0,51,1332	0/0:21,0:21:57.17:0,57,1334	0/0:18,0:18:51.17:0,51,1276	0/0:45,0:44:99:0,126,3330	0/1:25,0:25:0.17:0,0,0	./.	0/1:27,3:30:7.46:7,0,503	0/0:14,0:14:24.08:0,24,591	0/1:18,0:18:51.54:431,0,52	0/0:35,0:35:99:0,99,2221	1/1:14,0:13:27.07:288,27,0
chr10	80024430	.	CTG	C	993.76	PASS	AB=0.954;AC=7;AF=0.125;AN=56;BaseQRankSum=5.738;DP=903;FS=0.000;HRun=0;HaplotypeScore=155.8374;InbreedingCoeff=0.1377;MQ=55.75;MQ0=30;MQRankSum=1.621;QD=4.56;ReadPosRankSum=-1.758;VQSLOD=2.6802;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,27:44:87.14:973,87,0	0/0:7,0:7:18.04:0,18,261	0/0:40,0:14:23.76:0,24,264	0/0:66,0:26:18.27:0,18,358	0/0:29,0:29:60.17:0,60,904	0/0:5,0:45:14.62:0,15,75	0/1:18,1:19:21.95:22,0,428	0/1:34,4:38:56.97:57,0,604	0/0:33,0:33:65.04:0,65,1186	0/1:38,4:42:24.53:25,0,972	0/0:31,0:31:37.22:0,37,981	0/0:24,0:24:47.90:0,48,396	0/1:43,0:42:18.06:18,0,507	0/0:21,0:21:11.80:0,12,237	0/0:42,1:43:78.85:0,79,1692	0/0:30,1:31:33.69:0,34,979	0/0:15,0:15:30.03:0,30,417	0/0:15,0:15:22.30:0,22,301	0/0:26,0:22:19.28:0,19,452	0/0:27,2:29:30.51:0,31,801	0/0:54,4:57:52.22:0,52,1648	0/1:31,0:31:34.56:35,0,306	0/0:20,0:20:41.96:0,42,358	0/0:48,0:48:66.86:0,67,712	0/0:0,0:22:5.49:0,5,24	0/0:42,0:42:99:0,108,1551	0/0:30,2:32:1.22:0,1,850	0/0:7,0:7:21.05:0,21,305
chr10	80024452	.	GTA	G	1255.30	PASS	AB=0.944;AC=10;AF=0.179;AN=56;BaseQRankSum=7.654;DP=856;FS=1.327;HRun=0;HaplotypeScore=150.3079;InbreedingCoeff=0.5668;MQ=61.20;MQ0=15;MQRankSum=0.609;QD=5.76;ReadPosRankSum=-1.368;VQSLOD=3.0614;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:45,0:45:82.72:199,0,83	0/0:11,0:11:30.04:0,30,433	0/0:50,0:23:65.11:0,65,709	0/0:60,0:40:84.82:0,85,1012	0/0:30,0:30:87.12:0,87,1340	0/0:41,0:40:35.56:0,36,242	0/0:19,0:19:43.13:0,43,685	0/0:28,0:28:45.42:0,45,909	0/0:32,0:32:85.50:0,85,1504	0/0:42,0:42:74.34:0,74,1567	0/0:30,0:30:72.91:0,73,1334	1/1:22,0:22:12.40:119,12,0	0/1:40,1:40:1.79:443,0,2	0/1:11,3:14:3.92:58,0,4	0/0:47,0:47:99:0,124,2189	0/0:26,0:26:67.31:0,67,1226	0/0:15,0:15:32.99:0,33,489	0/0:9,0:9:23.53:0,24,342	0/0:23,0:22:60.77:0,61,837	0/0:29,0:29:68.18:0,68,1212	0/0:47,0:47:99:0,107,2135	1/1:25,4:29:15.84:261,16,0	1/1:22,0:22:1.45:121,1,0	0/1:44,1:45:7.10:205,0,7	0/0:17,0:16:26.23:0,26,210	0/0:42,0:42:99:0,126,2098	0/0:32,0:32:64.72:0,65,1270	0/0:8,0:8:24.07:0,24,415
chr10	80024565	.	A	AG	14760.02	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=21.478;DP=826;FS=17.413;HRun=0;HaplotypeScore=110.0904;InbreedingCoeff=0.9850;MQ=84.91;MQ0=0;MQRankSum=-2.586;QD=44.19;ReadPosRankSum=4.732;VQSLOD=2.8150;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:63.21:1006,63,0	0/0:13,0:13:36.12:0,36,503	0/0:27,0:27:75.22:0,75,992	0/0:25,0:25:60.65:0,61,787	0/0:33,0:33:93.31:0,93,1299	1/1:0,30:29:87.30:1389,87,0	0/0:30,0:30:87.29:0,87,1214	0/0:50,0:50:99:0,147,2024	0/0:29,0:29:84.24:0,84,1137	0/0:44,0:43:99:0,132,1842	0/0:22,0:22:66.21:0,66,906	1/1:1,31:32:84.29:1343,84,0	1/1:1,37:38:96.33:1533,96,0	1/1:0,35:35:99:1582,99,0	0/0:30,0:29:90.29:0,90,1241	0/0:23,0:23:66.22:0,66,923	0/0:28,0:28:84.23:0,84,1135	0/0:2,0:2:6.02:0,6,84	0/0:22,0:22:60.20:0,60,839	0/0:45,0:45:99:0,135,1887	0/0:37,0:37:99:0,108,1509	1/1:0,32:32:90.31:1439,90,0	1/1:1,30:31:84.29:1338,84,0	1/1:1,28:29:75.26:1199,75,0	1/1:0,39:39:99:1822,114,0	1/1:0,31:31:93.32:1486,93,0	0/0:32,0:32:96.32:0,96,1341	1/1:0,13:13:39.13:623,39,0
chr10	80025364	.	A	AC	3605.14	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.412;DP=638;FS=3.566;HRun=7;HaplotypeScore=78.3326;InbreedingCoeff=0.9746;MQ=87.85;MQ0=0;MQRankSum=-0.738;QD=27.52;ReadPosRankSum=2.676;VQSLOD=4.4939;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:54.05:0,54,510	0/0:11,0:11:30.05:0,30,290	0/0:23,0:23:40.99:0,41,365	0/0:22,0:21:39.63:0,40,355	0/0:36,0:36:99:0,99,950	0/0:27,0:27:75.11:0,75,724	0/0:13,0:13:33.05:0,33,318	0/0:25,0:25:59.96:0,60,551	0/0:20,0:20:60.10:0,60,579	0/0:27,0:27:75.11:0,75,720	0/0:23,0:23:63.10:0,63,608	1/1:3,22:25:54.16:647,54,0	1/1:3,16:19:48.15:579,48,0	1/1:2,19:21:45.14:543,45,0	0/0:31,0:31:87.11:0,87,829	0/0:24,0:24:66.08:0,66,628	0/0:27,0:27:78.12:0,78,753	0/0:6,0:6:18.03:0,18,174	0/0:28,0:28:66.08:0,66,631	0/0:38,0:38:99:0,108,1033	0/0:17,0:17:48.08:0,48,464	1/1:5,16:21:16.08:459,16,0	1/1:2,28:30:75.23:906,75,0	1/1:1,14:15:39.12:471,39,0	0/0:19,0:19:51.07:0,51,489	0/0:34,0:34:99:0,102,978	0/0:29,0:29:75.08:0,75,710	0/0:5,0:5:5.99:0,6,52
chr10	80025705	.	G	GAAGAC	2759.45	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.411;DP=622;FS=7.017;HRun=0;HaplotypeScore=124.1396;InbreedingCoeff=0.9475;MQ=79.94;MQ0=0;MQRankSum=-7.320;QD=65.70;ReadPosRankSum=0.416;VQSLOD=4.7421;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.19:0,69,1344	0/0:14,0:14:42.09:0,42,783	0/0:23,0:23:66.23:0,66,1308	0/0:21,0:21:52.97:0,53,1034	0/0:28,0:28:78.27:0,78,1596	1/1:4,19:23:54.19:1602,54,0	0/0:22,0:22:57.20:0,57,1167	0/0:35,0:35:87.28:0,87,1704	0/0:22,0:22:66.23:0,66,1321	0/0:27,0:27:72.25:0,72,1475	0/0:17,0:17:45.15:0,45,922	0/0:25,0:25:69.22:0,69,1366	0/0:26,0:26:69.24:0,69,1409	0/0:21,0:21:60.21:0,60,1230	0/0:20,0:20:57.20:0,57,1151	0/0:16,0:16:45.15:0,45,923	0/0:18,0:18:51.16:0,51,1005	0/0:9,0:9:24.08:0,24,492	0/0:18,0:18:54.15:0,54,1013	0/0:36,0:36:99:0,99,2031	0/0:21,0:21:60.17:0,60,1156	0/0:24,0:24:69.22:0,69,1375	0/0:32,0:32:87.28:0,87,1736	0/0:18,0:18:48.16:0,48,985	1/1:1,17:18:42.14:1279,42,0	0/0:31,0:31:90.30:0,90,1801	0/0:30,0:30:87.30:0,87,1777	0/0:2,0:2:6.02:0,6,123
chr10	80025932	.	CCTCTCT	C	1008.69	PASS	AB=0.990;AC=18;AF=0.360;AN=50;BaseQRankSum=2.137;DP=512;FS=2.679;HRun=0;HaplotypeScore=126.6077;InbreedingCoeff=0.2779;MQ=54.62;MQ0=19;MQRankSum=0.244;QD=5.12;ReadPosRankSum=2.352;VQSLOD=1.8518;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:6.01:0,6,71	0/0:6,0:6:3.01:0,3,46	./.	./.	0/0:27,0:27:12.01:0,12,187	0/0:21,0:21:12.93:0,13,288	0/0:22,0:21:27.53:0,28,535	0/0:30,0:30:0:0,0,0	0/0:20,1:20:24.72:0,25,270	0/0:21,0:20:12:0,12,161	0/0:18,0:18:5.52:0,6,413	1/1:15,0:15:9.03:143,9,0	0/1:18,0:19:99:164,0,122	0/1:20,0:20:0.48:42,0,0	0/0:28,0:27:27:0,27,507	0/1:11,0:11:36.26:36,0,40	0/0:16,0:14:6.02:0,6,112	0/0:7,0:6:2.97:0,3,20	1/1:20,0:20:6.02:111,6,0	./.	1/1:9,0:7:9.03:179,9,0	0/1:16,0:15:22.08:44,0,22	0/1:26,0:26:19.66:92,0,20	1/1:13,0:13:3:25,3,0	0/0:24,0:22:0.47:0,0,1	0/1:14,0:14:26.84:27,0,158	1/1:9,15:25:14.92:252,15,0	1/1:4,0:2:3.01:47,3,0
chr10	80025939	.	C	CTCTCTT	468.02	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.843;DP=533;FS=1.976;HRun=0;HaplotypeScore=146.9557;InbreedingCoeff=0.7363;MQ=52.82;MQ0=25;MQRankSum=-1.271;QD=9.96;ReadPosRankSum=-1.957;VQSLOD=2.7178;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:20.48:0,20,213	0/0:9,0:9:17.74:0,18,181	0/0:12,0:4:2.94:0,3,18	0/0:22,0:6:1.28:0,1,61	0/0:25,0:25:46.39:0,46,489	1/1:22,1:23:41.43:521,41,0	0/0:27,0:26:53.88:0,54,765	0/0:24,0:24:59.76:0,60,500	0/0:22,0:21:51.07:0,51,715	0/0:22,0:21:47.77:0,48,473	0/0:23,0:23:56.96:0,57,694	0/0:12,0:11:23.69:0,24,247	0/0:20,0:20:44.25:0,44,463	0/0:19,0:19:41.30:0,41,310	0/0:28,0:26:59.44:0,59,742	0/0:13,0:13:29.99:0,30,295	0/0:18,0:16:26.35:0,26,168	0/0:7,0:6:14.96:0,15,125	0/0:21,0:18:41.54:0,42,391	0/0:27,0:26:27.98:0,28,208	0/0:14,0:11:23.91:0,24,300	0/0:15,0:13:32.46:0,32,268	0/0:24,0:24:17.42:0,17,218	0/0:14,0:13:20.61:0,21,169	1/1:6,18:21:8.85:60,9,0	0/0:15,0:14:35.95:0,36,483	0/0:27,0:27:16.17:0,16,389	0/0:6,0:2:5.95:0,6,65
chr10	80025945	.	C	CTT	1042.69	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=5.634;DP=542;FS=7.760;HRun=1;HaplotypeScore=113.9153;InbreedingCoeff=0.8593;MQ=48.21;MQ0=28;MQRankSum=-1.648;QD=8.08;ReadPosRankSum=-1.382;VQSLOD=-0.5360;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:20.85:0,21,166	0/0:9,0:9:20.97:0,21,181	0/0:9,0:1:2.92:0,3,17	0/0:21,0:6:11.63:0,12,80	0/0:23,0:23:43.70:0,44,402	0/0:23,0:23:16.90:0,17,67	0/0:28,0:27:56.70:0,57,606	0/0:28,0:28:68.67:0,69,556	0/0:23,0:22:47.90:0,48,456	0/0:20,0:19:50.95:0,51,450	0/0:26,0:26:66:0,66,649	1/1:13,0:12:22.12:166,22,0	1/1:20,0:20:5.69:200,6,0	1/1:17,0:17:27.36:315,27,0	0/0:27,0:25:56.57:0,57,564	0/0:14,0:14:29.81:0,30,244	0/0:17,0:15:28.79:0,29,185	0/0:6,0:5:14.97:0,15,121	0/0:20,0:16:47.69:0,48,363	0/0:27,0:26:29.68:0,30,238	0/0:14,0:11:29.92:0,30,262	1/1:15,1:14:36.13:277,36,0	1/1:10,16:26:6.76:71,7,0	1/1:14,0:13:26.02:187,26,0	0/1:23,0:20:0.28:0,0,1	0/0:16,0:15:34.15:0,34,313	0/0:34,0:34:62.47:0,62,476	0/0:8,0:2:5.90:0,6,37
chr10	80025979	.	C	CTGTGTGTGTG	2408.87	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=8.222;DP=513;FS=0.680;HRun=0;HaplotypeScore=173.7813;InbreedingCoeff=0.6374;MQ=45.90;MQ0=21;MQRankSum=-6.138;QD=11.20;ReadPosRankSum=-0.509;VQSLOD=2.6282;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:0.03:0,0,0	0/0:7,0:7:15.05:0,15,454	0/0:24,0:10:20.48:0,20,434	0/0:18,0:4:2.19:0,2,175	0/0:15,0:15:20.94:0,21,554	1/1:19,9:32:0.89:3,1,0	0/0:29,0:28:29.80:0,30,909	0/0:26,0:25:42.09:0,42,1081	0/0:26,0:26:42.14:0,42,1092	0/0:9,0:9:17.75:0,18,476	0/0:22,0:22:39.11:0,39,1002	1/1:13,0:12:8.99:155,9,0	1/1:23,0:23:36.29:899,36,0	1/1:9,0:9:5.98:91,6,0	0/0:24,0:23:36.59:0,37,1013	0/0:15,0:15:27.55:0,28,721	0/1:11,0:9:82.08:84,0,82	0/1:6,0:5:33.88:34,0,190	0/0:12,0:9:12.03:0,12,298	0/0:24,0:23:27.05:0,27,753	0/0:16,0:14:27.06:0,27,681	1/1:25,0:22:15.05:349,15,0	1/1:18,0:18:2.65:77,3,0	1/1:13,1:13:5.51:109,6,0	1/1:16,1:14:2.99:24,3,0	1/1:17,0:16:29.36:680,29,0	0/0:31,0:31:41.82:0,42,1191	1/1:10,0:5:3.01:89,3,0
chr10	80026441	.	C	CGT	1140.22	PASS	AB=0.890;AC=17;AF=0.327;AN=52;BaseQRankSum=-1.260;DP=617;FS=5.194;HRun=0;HaplotypeScore=110.6279;InbreedingCoeff=0.1086;MQ=66.40;MQ0=10;MQRankSum=0.492;QD=3.74;ReadPosRankSum=-1.062;VQSLOD=2.3025;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:29:2.95:3,0,60	0/0:11,0:10:8.22:0,8,106	./.	./.	0/0:16,0:20:11.86:0,12,112	1/1:19,0:19:8.46:77,8,0	0/0:27,0:28:16.22:0,16,230	1/1:26,0:25:0.47:1,0,0	0/0:11,0:14:9.69:0,10,138	0/1:22,0:22:5.76:6,0,175	0/0:11,0:12:5.84:0,6,47	1/1:10,10:21:15.05:223,15,0	0/1:19,2:22:27.74:210,0,28	0/1:23,3:26:29.83:216,0,30	0/0:22,0:21:39.45:0,39,382	0/0:24,0:24:35.37:0,35,305	0/0:21,0:22:8.94:0,9,197	0/1:17,0:17:2.01:2,0,153	0/0:22,0:22:12:0,12,114	0/0:22,0:22:26.91:0,27,293	0/0:36,0:36:30.06:0,30,312	0/1:16,8:23:61.83:106,0,62	0/1:14,4:18:26.87:78,0,27	0/1:14,11:28:62.98:324,0,63	1/1:18,0:27:3:26,3,0	0/0:21,0:21:9.45:0,9,176	0/1:22,0:25:15.46:15,0,209	0/0:6,0:6:0.94:0,1,2
chr10	80027327	.	C	CT	1604.31	PASS	AB=0.801;AC=21;AF=0.375;AN=56;BaseQRankSum=-6.602;DP=479;FS=0.480;HRun=15;HaplotypeScore=77.3539;InbreedingCoeff=0.0822;MQ=59.41;MQ0=10;MQRankSum=-0.848;QD=5.42;ReadPosRankSum=-2.871;VQSLOD=1.8008;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:23:27.58:0,28,101	0/1:1,6:7:3.03:86,0,3	0/0:13,0:7:2.57:0,3,16	0/1:5,0:4:5.27:5,0,11	1/1:12,17:30:3.73:246,4,0	0/0:3,0:19:28.50:0,28,81	0/1:9,1:12:6.43:6,0,64	1/1:19,9:26:3.58:134,4,0	0/1:15,3:17:30.31:30,0,57	1/1:12,11:23:13.82:197,14,0	0/1:9,6:15:41.04:101,0,41	0/0:5,0:10:6.02:0,6,18	0/0:3,0:14:12.17:0,12,35	0/0:8,0:9:8.83:0,9,29	0/1:15,3:19:26.75:100,0,27	1/1:5,6:12:1.85:121,2,0	0/0:17,0:18:39.73:0,40,232	0/1:8,5:11:4.78:65,0,5	0/1:17,5:22:44.28:142,0,44	0/1:9,11:23:52.62:143,0,53	0/1:10,1:10:19.13:45,0,19	0/0:9,0:16:18.37:0,18,61	0/0:3,0:10:4.57:0,5,25	0/0:6,0:15:18.59:0,19,64	0/0:5,0:26:26.16:0,26,84	0/1:19,4:24:43.89:44,0,100	1/1:22,7:32:12.64:306,13,0	0/0:8,0:6:11.71:0,12,71
chr10	80028158	.	TG	T	1292.28	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.105;DP=708;FS=3.040;HRun=1;HaplotypeScore=65.7498;InbreedingCoeff=0.9989;MQ=80.39;MQ0=0;MQRankSum=-1.301;QD=30.77;ReadPosRankSum=2.089;VQSLOD=3.4674;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.16:0,93,1313	0/0:10,0:10:30.09:0,30,428	0/0:17,0:17:49.40:0,49,687	0/0:19,0:19:26.73:0,27,586	0/0:39,0:39:99:0,114,1563	1/1:0,23:23:63.20:869,63,0	0/0:16,0:16:48.16:0,48,717	0/0:36,0:36:99:0,108,1486	0/0:24,0:24:72.24:0,72,1077	0/0:28,0:28:84.26:0,84,1221	0/0:34,0:33:99:0,102,1526	0/0:21,0:21:63.21:0,63,941	0/0:26,0:26:78.26:0,78,1167	0/0:29,0:29:87.25:0,87,1239	0/0:25,0:25:75.20:0,75,1042	0/0:22,0:22:66.21:0,66,967	0/0:26,0:26:72.22:0,72,1054	0/0:10,0:10:30.10:0,30,448	0/0:19,0:19:57.19:0,57,853	0/0:35,0:35:99:0,105,1550	0/0:28,0:28:81.26:0,81,1190	0/0:28,0:28:84.28:0,84,1252	0/0:29,0:29:87.26:0,87,1257	0/0:19,0:19:57.13:0,57,798	1/1:0,19:19:39.13:545,39,0	0/0:39,0:39:99:0,117,1714	0/0:36,0:36:99:0,108,1553	0/0:19,0:19:57.17:0,57,830
chr10	80028475	.	AT	A	5392.91	PASS	AB=0.933;AC=23;AF=0.411;AN=56;BaseQRankSum=15.953;DP=587;FS=5.081;HRun=8;HaplotypeScore=65.6139;InbreedingCoeff=0.9294;MQ=77.28;MQ0=0;MQRankSum=-2.716;QD=22.85;ReadPosRankSum=2.007;VQSLOD=5.6317;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:84.14:811,84,0	0/0:17,0:17:45.14:0,45,543	0/1:13,1:14:12.93:13,0,233	0/0:14,0:14:29.98:0,30,332	0/0:34,0:34:90.27:0,90,1074	1/1:0,13:13:36.06:348,36,0	0/0:31,0:31:90.28:0,90,1087	0/0:25,0:25:51.16:0,51,616	0/0:20,0:20:57.16:0,57,677	0/0:25,0:25:63.16:0,63,745	0/0:20,0:20:54.16:0,54,642	1/1:2,16:18:42.07:406,42,0	1/1:1,17:18:39.06:377,39,0	1/1:1,17:18:45.07:435,45,0	0/0:18,0:18:51.16:0,51,616	0/0:17,0:17:48.15:0,48,580	0/0:28,0:28:75.23:0,75,905	0/0:13,0:13:36.09:0,36,422	0/0:18,0:18:49.39:0,49,583	0/0:20,0:20:54.14:0,54,622	0/0:28,0:28:81.22:0,81,955	1/1:1,30:31:75.10:724,75,0	1/1:3,25:28:72.11:694,72,0	1/1:0,10:10:30.05:290,30,0	1/1:2,18:20:42.06:406,42,0	1/1:2,21:23:29.86:572,30,0	0/0:23,0:23:66.20:0,66,794	1/1:0,11:11:33.05:319,33,0
chr10	80028841	.	C	CT	7688.66	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=7.653;DP=598;FS=18.072;HRun=5;HaplotypeScore=68.5069;InbreedingCoeff=0.9964;MQ=85.30;MQ0=0;MQRankSum=-0.569;QD=33.87;ReadPosRankSum=4.260;VQSLOD=3.1550;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:60.15:770,60,0	0/0:9,0:9:24.05:0,24,250	0/0:19,0:19:13.88:0,14,351	0/0:21,0:21:46.67:0,47,498	0/0:22,0:22:60.12:0,60,628	1/1:1,26:27:75.24:987,75,0	0/0:20,0:20:57.13:0,57,605	0/0:29,0:29:75.19:0,75,806	0/0:24,0:24:66.17:0,66,709	0/0:33,0:33:87.20:0,87,928	0/0:21,0:21:63.13:0,63,660	1/1:0,11:11:30.10:395,30,0	1/1:1,20:21:51.17:671,51,0	1/1:0,22:22:66.21:868,66,0	0/0:22,0:22:66.17:0,66,709	0/0:18,0:18:48.11:0,48,507	0/0:20,0:20:54.13:0,54,580	0/0:17,0:17:45.07:0,45,471	0/0:27,0:27:72.17:0,72,767	0/0:27,0:27:78.20:0,78,838	0/0:21,0:20:63.16:0,63,677	1/1:0,23:23:60.20:790,60,0	1/1:2,20:22:54.13:691,54,0	1/1:1,12:13:33.11:434,33,0	1/1:2,14:16:42.14:553,42,0	1/1:5,32:37:67.05:1216,67,0	0/0:21,0:21:57.13:0,57,604	1/1:2,8:10:24.08:316,24,0
chr10	80031150	.	CTGT	C	9004.44	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.187;DP=605;FS=6.839;HRun=0;HaplotypeScore=93.1578;InbreedingCoeff=0.9744;MQ=69.30;MQ0=0;MQRankSum=-0.381;QD=40.38;ReadPosRankSum=3.359;VQSLOD=6.0931;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:75.18:1155,75,0	0/0:11,0:11:33.11:0,33,708	0/0:10,0:10:23.23:0,23,534	0/0:16,0:16:35.91:0,36,656	0/0:27,0:27:75.24:0,75,1587	1/1:1,28:29:60.20:964,60,0	0/0:15,0:15:42.14:0,42,927	0/0:29,0:29:69.24:0,69,1467	0/0:26,0:26:75.26:0,75,1633	0/0:27,0:27:78.27:0,78,1716	0/0:32,0:32:90.31:0,90,1957	1/1:0,21:21:60.20:964,60,0	1/1:1,15:16:36.12:577,36,0	1/1:2,13:15:39.13:626,39,0	0/0:23,0:23:69.24:0,69,1517	0/0:13,0:13:36.12:0,36,777	0/0:31,0:31:90.31:0,90,1985	0/0:16,0:16:48.16:0,48,1034	0/0:20,0:19:51.17:0,51,1073	0/0:40,0:40:99:0,120,2643	0/0:15,0:15:42.14:0,42,909	1/1:4,13:17:39.13:627,39,0	1/1:0,27:27:75.26:1205,75,0	1/1:1,19:20:57.19:916,57,0	1/1:2,16:18:45.15:723,45,0	1/1:2,25:27:75.26:1200,75,0	0/0:31,0:31:90.30:0,90,1920	1/1:0,5:5:3.01:48,3,0
chr10	80032122	.	CGG	C	291.81	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=1.575;DP=189;FS=3.315;HRun=9;HaplotypeScore=31.5856;InbreedingCoeff=0.6782;MQ=82.02;MQ0=0;MQRankSum=-0.721;QD=17.17;ReadPosRankSum=0.628;VQSLOD=0.4597;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:24.07:0,24,370	0/0:2,0:2:6.01:0,6,75	0/0:7,0:8:14.53:0,15,184	0/0:8,0:8:17.84:0,18,209	0/0:5,0:5:15.04:0,15,224	1/1:0,11:11:24.07:279,24,0	0/0:7,0:7:21.04:0,21,294	0/0:12,0:12:32.99:0,33,376	0/0:5,0:5:9.03:0,9,148	0/0:4,0:5:8.52:0,9,108	0/0:3,0:3:6.02:0,6,98	0/0:9,0:9:24.07:0,24,370	0/0:4,0:4:12.03:0,12,173	0/0:6,0:6:12.04:0,12,194	0/0:4,0:4:9.03:0,9,131	0/0:4,0:4:8.99:0,9,98	0/0:4,0:11:12.02:0,12,131	0/0:3,0:3:6.02:0,6,96	0/0:7,0:7:21.07:0,21,345	0/0:6,0:6:13.29:0,13,200	0/0:11,0:11:27.08:0,27,409	0/0:5,0:5:15.05:0,15,246	0/0:5,0:5:12.04:0,12,195	0/0:15,0:15:33.11:0,33,540	1/1:4,2:6:12:127,12,0	0/0:11,0:11:21.06:0,21,320	0/0:7,0:7:15.05:0,15,246	./.
chr10	80032247	.	TA	T	631.65	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.039;DP=352;FS=0.864;HRun=8;HaplotypeScore=41.5504;InbreedingCoeff=0.9497;MQ=76.96;MQ0=2;MQRankSum=-0.592;QD=21.06;ReadPosRankSum=2.838;VQSLOD=3.3225;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:42.13:0,42,505	0/0:5,0:5:15.05:0,15,181	0/0:22,0:17:15.11:0,15,307	0/0:25,0:16:32.74:0,33,346	0/0:18,0:18:51.16:0,51,616	1/1:0,13:13:39.06:377,39,0	0/0:7,0:7:21.06:0,21,253	0/0:20,0:20:54.07:0,54,624	0/0:7,0:7:15.05:0,15,181	0/0:20,0:20:57.14:0,57,657	0/0:12,0:12:33.10:0,33,399	0/0:13,0:13:39.12:0,39,471	0/0:12,0:12:32.92:0,33,364	0/0:7,0:7:18.06:0,18,217	0/0:16,0:16:48.15:0,48,580	0/0:6,0:6:18.06:0,18,217	0/0:17,0:17:48.13:0,48,568	0/0:9,0:9:24.07:0,24,289	0/0:7,0:7:21.06:0,21,244	0/0:15,0:15:45.14:0,45,543	0/0:7,0:7:21.06:0,21,254	0/0:8,0:8:18.06:0,18,217	0/0:9,0:9:27.07:0,27,315	0/0:6,0:6:18.06:0,18,217	1/1:2,15:17:39.06:377,39,0	0/0:8,0:8:24.07:0,24,290	0/0:21,0:21:60.15:0,60,699	0/0:8,0:8:21.06:0,21,254
chr10	80033844	.	C	CT	442.77	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=4.600;DP=309;FS=3.670;HRun=10;HaplotypeScore=48.6267;InbreedingCoeff=0.5904;MQ=71.12;MQ0=4;MQRankSum=-0.076;QD=5.60;ReadPosRankSum=-0.636;VQSLOD=0.5917;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:17:6.84:34,7,0	0/0:4,0:4:11.98:0,12,98	1/1:23,0:10:8.62:35,9,0	0/0:21,0:11:8.26:0,8,52	0/0:7,0:7:20.94:0,21,166	1/1:2,2:4:9.02:96,9,0	0/0:6,0:6:11.65:0,12,84	0/0:32,0:32:71.58:0,72,580	0/0:5,0:5:11.70:0,12,80	0/0:8,0:8:17.25:0,17,123	0/1:13,0:13:12.45:12,0,142	0/0:5,0:5:14.96:0,15,121	0/0:8,0:8:17.14:0,17,124	0/0:6,0:6:17.96:0,18,144	0/0:6,0:6:14.78:0,15,111	0/1:6,0:6:14.01:14,0,104	0/0:19,0:19:35.79:0,36,281	0/0:14,0:12:23.56:0,24,182	0/0:20,0:20:12.21:0,12,294	0/0:7,0:7:20.35:0,20,155	0/0:6,0:6:14.20:0,14,105	0/0:1,0:1:2.99:0,3,24	0/0:7,0:7:17.71:0,18,130	0/0:6,0:6:14.97:0,15,121	1/1:2,13:15:39.08:404,39,0	0/0:12,0:13:3.59:0,4,36	0/0:9,0:9:18.44:0,18,149	0/0:18,0:20:30.52:0,31,137
chr10	80033852	.	T	TTC	98.52	PASS	AB=0.849;AC=3;AF=0.054;AN=56;BaseQRankSum=3.722;DP=307;FS=3.019;HRun=0;HaplotypeScore=51.7477;InbreedingCoeff=0.1540;MQ=69.77;MQ0=4;MQRankSum=-0.755;QD=3.18;ReadPosRankSum=0.289;VQSLOD=1.4959;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:3,12:16:2.57:166,0,3	0/0:4,0:4:12.04:0,12,171	0/0:28,0:10:16.79:0,17,132	0/0:20,0:10:14.48:0,14,112	0/0:7,0:7:21.07:0,21,298	0/0:4,0:4:7.79:0,8,29	0/0:5,0:5:15.03:0,15,192	0/0:32,0:32:87.70:0,88,1111	0/0:4,0:4:12.04:0,12,160	0/0:8,0:8:20.65:0,21,244	0/0:11,0:11:32.68:0,33,396	0/0:5,0:5:15.05:0,15,194	0/0:8,0:8:19.44:0,19,201	0/0:7,0:7:17.42:0,17,231	0/0:7,0:7:18.05:0,18,235	0/0:6,0:6:17.65:0,18,223	0/0:19,0:19:45.04:0,45,554	0/0:15,0:13:35.85:0,36,400	0/0:15,0:15:44.73:0,45,591	0/0:9,0:9:27.07:0,27,343	0/0:7,0:7:15.05:0,15,204	0/1:2,0:2:0.61:1,0,35	0/0:7,0:7:12.90:0,13,155	0/0:6,0:6:15.05:0,15,194	0/0:16,0:16:37.62:0,38,161	0/1:12,0:12:19.65:20,0,31	0/0:8,0:8:24.02:0,24,292	0/0:18,0:18:18.14:0,18,132
chr10	80033855	.	CTT	C	751.07	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=4.631;DP=297;FS=12.756;HRun=11;HaplotypeScore=48.2691;InbreedingCoeff=0.7975;MQ=70.54;MQ0=3;MQRankSum=-0.304;QD=13.91;ReadPosRankSum=1.390;VQSLOD=0.4749;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:11.98:0,12,99	0/0:4,0:4:9.03:0,9,139	0/0:26,0:10:11.85:0,12,119	0/1:19,0:9:4.75:5,0,37	0/0:7,0:7:18.06:0,18,277	0/0:3,0:3:6.01:0,6,56	0/0:3,0:4:11.53:0,12,147	0/0:28,0:28:42.61:0,43,644	0/0:3,0:4:8.52:0,9,101	0/0:8,0:8:18.05:0,18,258	0/0:12,0:12:32.59:0,33,449	1/1:2,3:5:9:95,9,0	1/1:1,7:8:21.05:222,21,0	1/1:2,6:8:24.06:254,24,0	0/0:7,0:7:18.04:0,18,249	0/0:6,0:6:15.05:0,15,231	0/0:15,1:16:10.20:0,10,533	0/0:15,0:13:33.06:0,33,450	0/0:14,0:15:32.60:0,33,464	0/0:9,0:9:17.42:0,17,237	0/0:5,0:7:11.53:0,12,147	1/1:1,1:2:6.01:63,6,0	1/1:2,4:6:12.03:128,12,0	1/1:0,6:6:15.04:160,15,0	0/0:16,0:16:39.07:0,39,398	0/0:13,0:13:24:0,24,221	0/0:8,0:8:21.07:0,21,304	0/0:18,0:18:47.42:0,47,462
chr10	80033898	.	C	CT	436.86	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=2.541;DP=242;FS=8.747;HRun=9;HaplotypeScore=35.6826;InbreedingCoeff=0.8044;MQ=62.92;MQ0=10;MQRankSum=-1.998;QD=17.47;ReadPosRankSum=0.610;VQSLOD=2.5802;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:11:14.98:0,15,130	./.	0/0:7,0:6:8.94:0,9,78	0/0:7,0:6:11.99:0,12,101	0/0:9,0:9:26.99:0,27,234	0/0:2,0:6:13.18:0,13,56	0/0:7,0:5:12:0,12,104	0/0:15,1:15:32.97:0,33,286	0/0:6,0:5:5.99:0,6,52	0/0:12,0:12:35.99:0,36,313	0/0:14,0:14:35.99:0,36,312	1/1:2,1:3:3.01:33,3,0	1/1:3,4:7:15.04:166,15,0	1/1:0,5:5:15.04:166,15,0	0/0:5,0:4:9:0,9,78	0/0:6,0:6:14.97:0,15,125	0/0:12,0:11:29.98:0,30,260	0/0:9,0:8:20.99:0,21,182	0/0:10,0:9:17.98:0,18,154	0/0:12,0:11:29.99:0,30,260	0/0:15,0:14:26.79:0,27,221	1/1:1,1:2:3.01:33,3,0	1/1:2,4:5:12.03:133,12,0	1/1:0,2:2:6.02:66,6,0	0/0:6,0:15:8.93:0,9,38	0/0:8,0:8:20.99:0,21,182	0/0:7,0:7:17.99:0,18,156	0/0:18,0:15:29.99:0,30,260
chr10	80035644	.	ATCAT	A	1762.40	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.445;DP=423;FS=2.253;HRun=0;HaplotypeScore=76.6718;InbreedingCoeff=0.9191;MQ=81.98;MQ0=0;MQRankSum=-2.929;QD=41.96;ReadPosRankSum=3.433;VQSLOD=3.6054;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.23:0,66,1708	0/0:9,0:9:21.07:0,21,554	0/0:28,0:28:75.26:0,75,1844	0/0:6,0:6:8:0,8,117	0/0:29,0:29:78.27:0,78,1968	1/1:1,24:25:66.23:1182,66,0	0/0:7,0:7:21.07:0,21,516	0/0:22,0:22:60.21:0,60,1544	0/0:7,0:7:21.07:0,21,554	0/0:18,0:18:54.19:0,54,1426	0/0:23,0:23:66.23:0,66,1739	0/0:14,0:14:36.12:0,36,949	0/0:11,0:11:27.09:0,27,713	0/0:10,0:10:27.09:0,27,681	0/0:8,0:8:24.08:0,24,600	0/0:8,0:8:24.04:0,24,542	0/0:11,0:11:33.11:0,33,871	0/0:4,0:4:12.04:0,12,317	0/0:20,0:20:51.16:0,51,1257	0/0:25,0:25:66.23:0,66,1733	0/0:9,0:9:27.09:0,27,711	0/0:18,0:18:51.18:0,51,1344	0/0:13,0:13:39.13:0,39,997	0/0:5,0:5:15.05:0,15,396	1/1:1,16:17:39.13:701,39,0	0/0:23,0:23:60.21:0,60,1551	0/0:22,0:22:63.22:0,63,1586	0/0:8,0:8:12.04:0,12,317
chr10	80035963	.	A	AT	1091.49	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-5.844;DP=489;FS=11.779;HRun=8;HaplotypeScore=49.9485;InbreedingCoeff=0.7955;MQ=84.31;MQ0=1;MQRankSum=-1.393;QD=18.19;ReadPosRankSum=-0.518;VQSLOD=2.0884;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.05:0,84,768	0/0:9,0:9:21.01:0,21,192	0/0:20,0:18:17.79:0,18,214	0/1:21,0:16:3.42:3,0,71	0/0:21,0:21:54.02:0,54,494	1/1:1,19:20:57.17:658,57,0	0/0:12,0:12:36:0,36,324	0/0:29,0:29:66:0,66,600	0/0:19,0:19:54.02:0,54,494	0/0:23,0:23:60.02:0,60,549	0/0:30,1:31:55.43:0,55,762	0/0:13,0:13:36.02:0,36,330	0/0:16,0:16:45.02:0,45,412	0/0:13,0:13:36.02:0,36,329	0/0:18,0:18:51.03:0,51,466	0/0:21,0:21:63.03:0,63,577	0/0:12,0:12:30.01:0,30,275	0/0:6,0:6:14.98:0,15,131	0/0:16,0:16:35.99:0,36,325	0/0:21,0:21:63.03:0,63,577	0/0:10,0:10:27.01:0,27,247	0/0:21,0:21:57.02:0,57,518	0/0:23,0:23:35.47:0,35,497	0/0:4,0:4:12.01:0,12,110	1/1:2,16:18:48.14:554,48,0	0/0:16,0:16:45.02:0,45,412	0/0:24,0:24:66.02:0,66,599	0/0:3,0:3:9:0,9,82
chr10	80037395	.	TGAGAGAGA	T	137.07	PASS	AB=0.967;AC=8;AF=0.160;AN=50;BaseQRankSum=2.787;DP=500;FS=13.058;HRun=0;HaplotypeScore=116.1354;InbreedingCoeff=0.3675;MQ=72.95;MQ0=14;MQRankSum=-3.438;QD=1.40;ReadPosRankSum=0.343;VQSLOD=1.1563;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:21.07:0,21,361	0/0:9,0:9:9.03:0,9,184	0/1:32,0:16:0:0,0,0	./.	0/0:20,0:20:12.04:0,12,233	1/1:13,0:15:5.38:54,5,0	0/1:13,1:14:40.39:64,0,40	0/0:25,0:25:7.69:0,8,34	0/0:16,0:15:21.07:0,21,487	0/0:19,0:19:15.04:0,15,203	0/0:13,0:13:3.01:0,3,67	0/0:17,0:17:9.03:0,9,216	0/0:9,0:8:3.01:0,3,68	0/0:16,0:16:12.04:0,12,294	0/0:10,0:13:9:0,9,91	0/0:16,0:16:3.01:0,3,45	0/0:16,0:20:8.16:0,8,368	0/0:11,0:11:3.01:0,3,64	1/1:18,0:18:3.01:61,3,0	./.	./.	0/0:21,0:21:9.03:0,9,171	0/0:16,0:16:2.99:0,3,24	0/0:18,0:18:18.02:0,18,302	0/0:16,0:16:15.04:0,15,277	0/0:24,0:24:24.07:0,24,495	1/1:16,3:19:3:72,3,0	0/0:5,0:4:5.99:0,6,80
chr10	80037398	.	G	GAC	1150.01	PASS	AB=0.568;AC=10;AF=0.179;AN=56;BaseQRankSum=3.893;DP=513;FS=5.218;HRun=0;HaplotypeScore=73.3421;InbreedingCoeff=0.7568;MQ=70.23;MQ0=17;MQRankSum=0.427;QD=10.95;ReadPosRankSum=1.979;VQSLOD=3.0775;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:38.90:0,39,314	0/0:10,0:10:26.97:0,27,225	0/0:32,0:16:30.95:0,31,240	0/0:41,0:16:30.74:0,31,262	0/0:19,0:19:26.13:0,26,303	0/0:15,0:15:30.68:0,31,267	0/0:14,0:14:35.96:0,36,302	0/0:25,0:25:67.51:0,68,545	0/0:16,0:15:38.83:0,39,368	0/0:22,0:22:51.51:0,52,482	0/0:13,0:13:10.43:0,10,183	0/1:1,15:16:0.93:106,0,1	1/1:11,0:10:14.21:126,14,0	0/1:7,11:18:45.75:46,0,46	0/0:12,0:12:32.95:0,33,272	0/0:21,0:19:35.85:0,36,285	0/0:18,0:17:38.81:0,39,303	0/0:12,0:12:33.30:0,33,271	0/0:17,0:17:50.67:0,51,437	0/0:19,0:18:47.77:0,48,387	0/0:12,0:12:32.94:0,33,271	1/1:25,0:25:28.93:381,29,0	1/1:17,0:17:38.90:310,39,0	1/1:18,0:18:27.68:349,28,0	0/0:18,0:18:29.97:0,30,251	0/0:25,0:24:61.88:0,62,530	0/0:19,0:19:50.74:0,51,401	0/0:5,0:4:0.71:0,1,23
chr10	80038757	.	G	GAGCAGGAGC	651.57	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=4.973;DP=617;FS=0.000;HRun=0;HaplotypeScore=158.3460;InbreedingCoeff=0.6470;MQ=53.71;MQ0=29;MQRankSum=-5.410;QD=18.10;ReadPosRankSum=0.848;VQSLOD=2.7312;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.22:0,87,2345	0/0:9,0:7:13.44:0,13,304	0/0:54,0:11:21.41:0,21,370	0/0:41,0:18:31.76:0,32,477	0/0:27,0:27:75.20:0,75,2056	0/1:22,0:22:12.96:311,0,13	0/0:25,0:25:73.05:0,73,1866	0/0:27,0:24:68.95:0,69,1302	0/0:29,0:28:78.23:0,78,2169	0/0:23,0:22:66.21:0,66,1818	0/0:13,0:13:39.10:0,39,970	0/0:16,0:15:42.11:0,42,949	0/0:19,0:19:57.15:0,57,1456	0/0:21,0:21:30.09:0,30,678	0/0:19,0:17:48.15:0,48,1326	0/0:9,0:9:27.08:0,27,769	0/0:23,0:23:57.04:0,57,1409	0/0:14,0:14:36.12:0,36,1035	0/0:20,0:15:45.06:0,45,825	0/0:19,0:18:51.15:0,51,1378	0/0:30,0:29:78.24:0,78,2060	0/0:15,0:13:29.99:0,30,719	0/0:17,0:17:36.11:0,36,930	0/0:23,0:23:62.94:0,63,1330	1/1:8,5:14:23.29:446,23,0	0/0:23,0:23:66.18:0,66,1555	0/0:25,0:25:75.10:0,75,1695	0/0:5,0:5:15:0,15,391
chr10	80038763	.	GAGGAGC	G	2674.68	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.356;DP=629;FS=0.000;HRun=0;HaplotypeScore=115.3929;InbreedingCoeff=0.9564;MQ=53.32;MQ0=29;MQRankSum=-5.233;QD=24.32;ReadPosRankSum=0.163;VQSLOD=3.2635;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:81.07:0,81,1862	0/0:10,0:8:20.96:0,21,313	0/0:59,0:12:6.90:0,7,216	0/0:48,0:20:16.52:0,17,269	0/0:26,0:26:57.16:0,57,1574	0/0:1,0:25:9.03:0,9,210	0/0:29,0:29:63.13:0,63,1343	0/0:26,0:23:38.91:0,39,787	0/0:28,0:27:60.17:0,60,1651	0/0:22,0:21:45.15:0,45,1320	0/0:13,0:13:18.05:0,18,408	1/1:11,4:14:27.08:504,27,0	1/1:12,6:18:42.14:803,42,0	1/1:5,15:20:18.06:367,18,0	0/0:19,0:17:45.13:0,45,1202	0/0:10,0:10:30.08:0,30,843	0/0:23,0:23:54.03:0,54,1156	0/0:14,0:14:33.07:0,33,858	0/0:21,0:16:27.07:0,27,558	0/0:18,0:17:33.10:0,33,895	0/0:28,0:27:54.16:0,54,1494	1/1:8,8:14:18.06:337,18,0	1/1:4,12:16:18.06:378,18,0	1/1:22,3:25:29.68:471,30,0	0/0:6,0:14:24.05:0,24,361	0/0:22,0:22:45.11:0,45,1038	0/0:22,0:22:60.15:0,60,1500	0/0:5,0:5:14.26:0,14,370
chr10	80038792	.	G	GCA	195.95	PASS	AB=0.848;AC=2;AF=0.036;AN=56;BaseQRankSum=4.751;DP=590;FS=1.256;HRun=0;HaplotypeScore=92.1476;InbreedingCoeff=-0.0377;MQ=55.32;MQ0=11;MQRankSum=-4.547;QD=5.60;ReadPosRankSum=-1.470;VQSLOD=2.8492;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1668	0/0:9,0:9:27.09:0,27,438	0/0:61,0:24:56.23:0,56,766	0/0:52,0:18:42.14:0,42,669	0/0:25,0:25:72.23:0,72,1143	0/1:19,0:19:59.29:59,0,165	0/0:27,0:27:77.87:0,78,1174	0/0:20,0:20:57.13:0,57,855	0/0:19,0:19:57.16:0,57,895	0/0:15,0:15:45.15:0,45,711	0/0:9,0:9:24.07:0,24,369	0/0:14,0:13:30.03:0,30,340	0/0:13,0:13:32.55:0,33,336	0/0:20,0:20:29.56:0,30,359	0/0:25,0:25:72.24:0,72,1158	0/0:12,0:12:36.12:0,36,587	0/0:21,0:21:63.18:0,63,963	0/0:15,0:15:45.15:0,45,728	0/0:20,0:20:54.14:0,54,881	0/0:15,0:15:45.14:0,45,705	0/0:28,0:28:78.26:0,78,1247	0/0:13,0:13:23.41:0,23,262	0/0:16,0:16:23:0,23,227	0/0:21,0:21:39.42:0,39,529	0/1:9,7:16:99:226,0,137	0/0:18,0:18:54.18:0,54,865	0/0:24,0:24:72.23:0,72,1150	0/0:6,0:6:17.99:0,18,240
chr10	80038796	.	G	GC	79.48	PASS	AB=0.848;AC=2;AF=0.036;AN=56;BaseQRankSum=4.626;DP=572;FS=7.968;HRun=0;HaplotypeScore=80.8962;InbreedingCoeff=-0.0384;MQ=55.52;MQ0=12;MQRankSum=-4.230;QD=2.34;ReadPosRankSum=-2.614;VQSLOD=0.9472;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1467	0/0:8,0:8:24.08:0,24,336	0/0:62,0:24:43.56:0,44,668	0/0:53,0:19:44.82:0,45,618	0/0:23,0:23:66.22:0,66,921	0/1:18,0:18:23.30:23,0,248	0/0:24,0:24:68.42:0,68,906	0/0:17,0:17:51.17:0,51,713	0/0:17,0:17:51.17:0,51,713	0/0:14,0:14:42.13:0,42,570	0/0:8,0:8:24.07:0,24,318	0/0:13,0:12:27.09:0,27,373	0/0:13,0:13:33.11:0,33,447	0/0:20,0:20:30.08:0,30,403	0/0:24,0:24:72.24:0,72,1006	0/0:12,0:12:36.12:0,36,502	0/0:20,0:20:57.19:0,57,792	0/0:15,0:15:42.14:0,42,587	0/0:23,0:22:63.20:0,63,865	0/0:13,0:13:36.12:0,36,504	0/0:28,0:28:78.26:0,78,1085	0/0:14,0:14:27.08:0,27,344	0/0:17,0:17:24.08:0,24,325	0/0:19,0:19:38.66:0,39,543	0/1:9,7:16:99:144,0,138	0/0:18,0:18:54.18:0,54,755	0/0:23,0:23:69.23:0,69,964	0/0:4,0:4:12.03:0,12,152
chr10	80038856	.	AGAG	A	1630.67	PASS	AB=0.889;AC=14;AF=0.269;AN=52;BaseQRankSum=5.137;DP=426;FS=0.604;HRun=0;HaplotypeScore=72.8614;InbreedingCoeff=0.6453;MQ=58.64;MQ0=11;MQRankSum=2.217;QD=10.73;ReadPosRankSum=0.457;VQSLOD=3.1412;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:45.63:0,46,768	0/0:6,0:6:12.04:0,12,219	0/1:19,0:7:0.02:0,0,0	0/1:30,0:14:31.34:31,0,48	0/0:12,0:12:18.06:0,18,293	0/0:11,0:12:27.48:0,27,397	0/0:20,0:20:45.07:0,45,758	0/1:13,1:13:24.38:24,0,238	0/0:16,0:16:45.15:0,45,880	0/0:10,0:10:27.09:0,27,469	0/0:10,0:9:15.05:0,15,229	1/1:1,9:10:9.03:129,9,0	1/1:0,11:11:15.05:215,15,0	1/1:10,5:15:27.09:384,27,0	0/0:20,0:20:39.13:0,39,723	0/0:15,0:15:39.13:0,39,755	0/0:22,0:20:37.91:0,38,668	0/0:12,0:12:26.97:0,27,402	0/0:15,0:13:24.08:0,24,413	0/0:11,0:11:24.08:0,24,401	0/0:27,0:26:48.15:0,48,820	1/1:12,0:12:27.08:351,27,0	./.	1/1:11,16:27:27.09:387,27,0	0/0:9,0:9:15.05:0,15,235	0/1:5,8:13:78.76:283,0,79	0/0:20,0:20:57.16:0,57,1028	./.
chr10	80039493	.	T	TGAG	1806.39	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.993;DP=476;FS=26.059;HRun=0;HaplotypeScore=117.1064;InbreedingCoeff=0.9499;MQ=49.62;MQ0=3;MQRankSum=-6.737;QD=17.20;ReadPosRankSum=-1.295;VQSLOD=1.6336;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,20:27:64.14:1128,64,0	0/0:9,0:9:21.07:0,21,355	0/0:26,0:21:56.12:0,56,708	0/0:20,0:17:41.26:0,41,625	0/0:19,0:19:38.67:0,39,657	0/0:13,0:13:32.77:0,33,238	0/0:13,0:13:33.07:0,33,501	0/0:35,0:35:90.02:0,90,1110	0/0:13,0:13:30.10:0,30,506	0/0:22,0:21:57.17:0,57,876	0/0:19,0:18:39.12:0,39,608	1/1:12,0:11:14.99:132,15,0	1/1:15,0:14:25.28:235,25,0	1/1:12,0:12:15:133,15,0	0/0:14,0:14:30.09:0,30,482	0/0:19,0:18:48.10:0,48,755	0/0:15,0:15:36.12:0,36,573	0/0:4,0:4:12:0,12,172	0/0:12,0:12:32.47:0,32,486	0/0:25,0:25:57.17:0,57,878	0/0:27,0:27:81.26:0,81,1330	1/1:16,0:16:24.01:217,24,0	1/1:16,0:16:17.62:130,18,0	1/1:7,0:7:2.98:22,3,0	0/0:10,0:10:16.18:0,16,117	0/0:24,0:24:68.98:0,69,974	0/0:21,0:21:57.19:0,57,964	0/0:11,0:11:24:0,24,320
chr10	80039499	.	T	TGATGAGGAG	4561.25	PASS	AB=1.000;AC=12;AF=0.222;AN=54;BaseQRankSum=4.773;DP=473;FS=15.076;HRun=0;HaplotypeScore=159.7583;InbreedingCoeff=0.8547;MQ=50.13;MQ0=3;MQRankSum=-6.639;QD=40.37;ReadPosRankSum=-1.980;VQSLOD=2.9425;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:0.37:390,0,0	0/0:11,0:11:21.07:0,21,554	0/0:27,0:21:43.56:0,44,611	0/0:21,0:19:44.31:0,44,896	0/0:17,0:17:39.13:0,39,1177	0/0:1,0:12:28.09:0,28,393	0/0:13,0:13:33.55:0,34,786	0/0:29,0:29:80.94:0,81,1174	0/0:12,0:12:30.10:0,30,813	0/0:19,0:18:51.18:0,51,1479	0/0:20,0:19:39.05:0,39,925	1/1:8,5:12:23.94:698,24,0	1/1:11,6:16:47.95:1359,48,0	1/1:2,9:12:18.06:664,18,0	0/0:15,0:15:30.10:0,30,881	0/0:20,0:19:48.11:0,48,1264	0/0:15,0:15:36.04:0,36,656	0/0:4,0:4:12.04:0,12,319	0/0:13,0:13:35.94:0,36,676	0/0:25,0:25:51.01:0,51,1251	0/0:27,0:27:81.21:0,81,2042	1/1:2,12:15:24.01:1038,24,0	1/1:1,14:18:15.05:408,15,0	./.	0/1:7,0:11:3.94:4,0,202	0/0:21,0:21:63.15:0,63,1424	0/0:22,0:22:60.21:0,60,1801	0/0:10,0:10:18.06:0,18,503
chr10	80039613	.	AAG	A	7222.54	PASS	AB=1.000;AC=52;AF=0.963;AN=54;BaseQRankSum=2.406;DP=269;FS=2.979;HRun=0;HaplotypeScore=279.7098;InbreedingCoeff=-0.0823;MQ=49.92;MQ0=0;MQRankSum=-2.362;QD=26.95;ReadPosRankSum=1.184;VQSLOD=5.1298;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:5.98:21,6,0	1/1:8,0:8:24.08:310,24,0	0/1:6,0:6:39.50:144,0,40	0/1:2,0:2:20.09:31,0,20	1/1:31,0:31:81.08:976,81,0	1/1:11,0:11:26.78:356,27,0	1/1:3,0:3:6.02:76,6,0	1/1:27,0:27:51.07:640,51,0	1/1:8,0:8:21.02:246,21,0	1/1:21,0:21:63.16:815,63,0	1/1:24,0:24:66.21:847,66,0	1/1:1,3:3:6.47:53,6,0	1/1:0,1:1:3:26,3,0	1/1:3,1:4:2.98:24,3,0	1/1:8,0:8:18.02:237,18,0	1/1:2,0:2:6.02:73,6,0	1/1:2,0:2:6.02:79,6,0	1/1:2,0:2:6.02:80,6,0	1/1:8,0:8:14.61:152,15,0	1/1:22,1:23:63.15:782,63,0	1/1:1,0:1:3.01:40,3,0	1/1:1,6:7:17.99:159,18,0	1/1:3,10:13:36.35:294,36,0	./.	1/1:8,0:8:18.02:217,18,0	1/1:20,0:20:36.43:137,36,0	1/1:12,1:13:30.06:375,30,0	1/1:8,0:8:10.49:31,10,0
chr10	80039769	.	GT	G	5737.25	PASS	AB=1.000;AC=54;AF=0.964;AN=56;BaseQRankSum=2.904;DP=308;FS=18.064;HRun=1;HaplotypeScore=181.5254;InbreedingCoeff=-0.0558;MQ=64.49;MQ0=0;MQRankSum=-2.270;QD=18.63;ReadPosRankSum=3.498;VQSLOD=3.3266;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:17.97:149,18,0	1/1:16,0:16:47.86:377,48,0	0/1:8,0:8:25.67:62,0,26	0/1:8,0:8:23.81:90,0,24	1/1:25,0:25:59.89:487,60,0	1/1:9,0:9:23.94:189,24,0	1/1:8,0:8:12.45:98,12,0	1/1:18,0:18:8.73:280,9,0	1/1:12,1:13:35.93:302,36,0	1/1:12,0:12:29.84:222,30,0	1/1:11,0:11:29.94:241,30,0	1/1:15,0:15:38.90:310,39,0	1/1:15,0:15:35.92:288,36,0	1/1:8,1:9:20.97:183,21,0	1/1:6,0:6:14.96:119,15,0	1/1:7,0:7:17.94:140,18,0	1/1:4,0:4:2.99:24,3,0	1/1:1,0:1:2.96:19,3,0	1/1:11,0:11:29.15:204,29,0	1/1:19,0:19:47.89:383,48,0	1/1:4,0:4:2.90:23,3,0	1/1:12,1:13:32.96:288,33,0	1/1:14,0:14:32.93:266,33,0	1/1:4,0:4:9:79,9,0	1/1:16,0:16:32.91:260,33,0	1/1:14,0:14:18.82:244,19,0	1/1:11,0:11:26.89:216,27,0	1/1:7,1:8:23.91:194,24,0
chr10	80040946	.	C	CTT	1039.15	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.478;DP=398;FS=3.244;HRun=11;HaplotypeScore=75.4489;InbreedingCoeff=0.7763;MQ=78.42;MQ0=4;MQRankSum=-4.913;QD=25.35;ReadPosRankSum=1.729;VQSLOD=3.8803;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,11:19:21.53:574,22,0	0/0:5,0:5:9.01:0,9,87	0/0:37,0:21:33.01:0,33,309	0/0:22,0:12:2.40:0,2,19	0/0:18,0:18:39.06:0,39,377	1/1:5,7:12:18.06:260,18,0	0/0:12,0:12:4.52:0,5,228	0/0:28,0:28:50.66:0,51,529	0/0:12,0:12:14.93:0,15,132	0/0:13,0:13:29.94:0,30,279	0/0:14,0:14:23.89:0,24,213	0/0:4,0:7:14.28:0,14,81	0/0:8,0:11:25.73:0,26,151	0/0:6,0:8:11.27:0,11,65	0/0:13,0:13:29.64:0,30,251	0/0:7,0:7:21.01:0,21,196	0/0:25,0:25:28.89:0,29,490	0/0:10,0:10:14.98:0,15,140	0/0:21,0:21:38.64:0,39,374	0/0:19,0:18:39:0,39,366	0/0:8,0:8:17.19:0,17,164	0/0:4,0:5:13.83:0,14,61	0/0:4,0:7:2.93:0,3,48	0/0:6,0:11:26.07:0,26,171	1/1:3,7:10:24.08:344,24,0	0/0:21,0:21:14.87:0,15,297	0/0:18,0:17:36.05:0,36,344	0/0:4,0:4:12.02:0,12,114
chr10	80040959	.	G	GT	4302.39	PASS	AB=0.741;AC=45;AF=0.804;AN=56;BaseQRankSum=1.392;DP=397;FS=0.715;HRun=9;HaplotypeScore=59.1787;InbreedingCoeff=0.5279;MQ=69.70;MQ0=6;MQRankSum=-0.661;QD=13.88;ReadPosRankSum=0.154;VQSLOD=4.6133;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,1:20:30.26:232,30,0	1/1:1,4:5:9.02:98,9,0	0/0:31,0:16:2.65:0,3,20	0/0:20,0:10:2.74:0,3,12	1/1:8,13:21:0.84:179,1,0	1/1:8,0:8:11.87:86,12,0	0/0:14,0:14:29.92:0,30,248	1/1:8,16:24:42.11:462,42,0	1/1:1,8:9:12.03:132,12,0	1/1:5,8:13:21.06:232,21,0	1/1:3,8:11:18.48:184,18,0	1/1:10,0:10:25.03:160,25,0	1/1:13,0:11:19.91:115,20,0	1/1:8,0:8:17.62:120,18,0	0/1:6,8:14:5.05:158,0,5	0/1:8,0:8:17.02:57,0,17	0/0:22,0:22:53.93:0,54,457	1/1:1,8:10:17.84:179,18,0	1/1:9,9:18:30.02:306,30,0	1/1:5,15:18:32.75:315,33,0	1/1:5,4:9:15.50:157,15,0	1/1:10,0:10:26.69:190,27,0	1/1:9,0:9:14.01:85,14,0	1/1:11,0:11:19.80:105,20,0	1/1:11,0:11:23.84:181,24,0	1/1:5,5:11:23.84:236,24,0	0/1:8,18:26:4.99:167,0,5	1/1:1,9:9:15.04:165,15,0
chr10	80040961	.	T	TC	3004.47	PASS	AB=0.995;AC=34;AF=0.607;AN=56;BaseQRankSum=6.920;DP=401;FS=4.793;HRun=0;HaplotypeScore=62.4853;InbreedingCoeff=0.1273;MQ=69.65;MQ0=6;MQRankSum=-5.151;QD=10.22;ReadPosRankSum=8.542;VQSLOD=2.8749;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:8,12:20:44.16:460,44,0	0/1:6,0:6:9.48:9,0,57	0/0:31,0:16:34.86:0,35,225	0/0:20,0:10:7.70:0,8,53	0/0:21,0:21:13.46:0,13,226	1/1:2,8:10:23.80:234,24,0	0/0:15,0:15:39.03:0,39,481	0/1:22,0:22:53.43:53,0,142	0/1:10,0:10:13.91:27,0,14	0/1:14,0:14:19.71:20,0,116	0/1:12,0:12:10.53:11,0,73	1/1:4,6:10:28.32:336,28,0	1/1:8,5:11:26.92:282,27,0	1/1:3,5:8:15.72:228,16,0	0/1:15,1:16:42.36:42,0,119	0/1:6,0:6:3.24:3,0,63	0/0:20,0:20:60.07:0,60,786	1/1:9,0:9:15.19:62,15,0	0/1:17,0:17:23.22:23,0,135	0/1:19,0:17:28.54:29,0,66	0/1:9,0:9:17.38:17,0,58	1/1:4,6:10:30.03:389,30,0	1/1:5,4:9:23.73:240,24,0	1/1:4,7:11:23.99:261,24,0	1/1:1,13:14:29.96:375,30,0	0/1:11,0:11:18.27:18,0,57	0/1:28,0:27:35.83:36,0,139	1/1:10,0:9:10.93:36,11,0
chr10	80042913	.	AACAC	A	1085.85	PASS	AB=0.907;AC=18;AF=0.333;AN=54;BaseQRankSum=7.862;DP=549;FS=1.475;HRun=0;HaplotypeScore=102.6713;InbreedingCoeff=0.7080;MQ=68.73;MQ0=11;MQRankSum=-5.591;QD=5.25;ReadPosRankSum=2.645;VQSLOD=1.5268;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:17.80:0,18,355	0/0:6,0:7:5.75:0,6,83	./.	0/0:30,0:15:0.47:0,0,1	0/0:16,0:16:12.04:0,12,274	1/1:17,9:27:12.02:149,12,0	0/1:23,1:25:20.29:20,0,327	0/0:15,0:14:8.24:0,8,96	0/0:9,0:20:18.05:0,18,307	0/0:16,0:16:33.05:0,33,630	0/0:23,0:26:29.57:0,30,581	1/1:16,0:16:6.01:56,6,0	1/1:17,0:17:15.02:140,15,0	1/1:19,0:19:24.03:225,24,0	0/0:12,0:12:20.93:0,21,361	0/0:17,0:19:35.25:0,35,667	0/0:14,0:15:28.06:0,28,479	0/0:18,0:18:15.94:0,16,310	0/0:8,0:8:12.04:0,12,196	0/1:20,1:21:1.94:2,0,800	0/0:22,0:23:20.78:0,21,309	1/1:21,0:21:12.01:113,12,0	1/1:21,0:21:6.01:56,6,0	1/1:15,0:15:6.01:57,6,0	1/1:9,11:21:31.34:452,31,0	0/0:20,0:28:44.83:0,45,800	0/0:16,0:17:23.77:0,24,398	0/0:3,0:6:2.74:0,3,52
chr10	80042946	.	ACACACACACACG	A	1452.50	PASS	AB=0.957;AC=9;AF=0.161;AN=56;BaseQRankSum=7.981;DP=621;FS=0.633;HRun=0;HaplotypeScore=188.7726;InbreedingCoeff=0.5565;MQ=58.27;MQ0=12;MQRankSum=-6.375;QD=13.70;ReadPosRankSum=3.042;VQSLOD=2.7089;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:54.02:0,54,1745	0/0:7,0:7:20.96:0,21,654	0/0:29,0:12:29.16:0,29,309	0/0:37,0:14:20.14:0,20,248	0/0:23,0:23:59.98:0,60,1918	0/0:27,0:26:8.12:0,8,768	0/0:30,0:29:68.47:0,68,2281	0/0:17,0:16:47.90:0,48,851	0/0:25,0:25:44.11:0,44,1357	0/0:23,0:23:67.80:0,68,2574	0/0:23,0:23:54.10:0,54,2042	1/1:12,0:12:6.21:36,6,0	0/1:24,1:25:21.35:329,0,21	0/1:18,2:20:6.38:680,0,6	0/0:15,0:15:42.07:0,42,1703	0/0:25,0:25:60.41:0,60,2550	0/0:23,0:23:65.34:0,65,2127	0/0:20,0:20:55.87:0,56,2022	0/0:10,0:10:27.59:0,28,678	0/0:30,0:29:81.19:0,81,3350	0/0:35,0:35:82:0,82,2448	1/1:18,2:20:17.97:337,18,0	1/1:14,0:13:6.96:115,7,0	0/1:15,0:15:77.89:102,0,78	0/0:28,0:27:69.08:0,69,1446	0/0:26,0:26:75.98:0,76,2712	0/0:24,0:23:62.79:0,63,1981	0/0:9,0:9:21.03:0,21,610
chr10	80042948	.	ACACACACACG	A	2318.81	PASS	AB=0.761;AC=12;AF=0.214;AN=56;BaseQRankSum=6.487;DP=612;FS=0.602;HRun=0;HaplotypeScore=166.5563;InbreedingCoeff=0.7454;MQ=60.47;MQ0=11;MQRankSum=-5.861;QD=18.55;ReadPosRankSum=2.425;VQSLOD=2.2802;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:51.24:0,51,1450	0/0:7,0:7:20.96:0,21,513	0/0:30,0:13:32.15:0,32,332	0/0:34,0:13:20.07:0,20,226	0/0:24,0:24:63.42:0,63,1633	0/1:26,0:25:33.53:34,0,540	0/0:29,0:28:68.45:0,68,1830	0/0:17,0:16:47.75:0,48,689	0/0:26,0:26:47.40:0,47,1119	0/0:23,0:23:67.59:0,68,2136	0/0:22,0:22:51.05:0,51,1664	1/1:13,0:13:9.50:133,10,0	1/1:1,21:22:15.05:493,15,0	1/1:13,6:19:53.90:1004,54,0	0/0:15,0:15:42.07:0,42,1412	0/0:25,0:25:60.18:0,60,2136	0/0:23,0:23:64.76:0,65,1776	0/0:20,0:20:55.21:0,55,1606	0/0:9,0:9:25.01:0,25,546	0/0:30,0:29:81.19:0,81,2766	0/0:36,0:36:84.94:0,85,1951	1/1:3,17:20:17.91:426,18,0	1/1:1,12:12:6.49:206,6,0	0/1:1,11:12:25.28:196,0,25	0/0:29,0:28:71.96:0,72,1050	0/0:26,0:26:74.98:0,75,2219	0/0:25,0:24:58.99:0,59,1564	0/0:9,0:9:21.03:0,21,481
chr10	80042950	.	ACACACACG	A	1772.66	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=7.659;DP=613;FS=1.243;HRun=0;HaplotypeScore=148.9737;InbreedingCoeff=0.8457;MQ=62.41;MQ0=11;MQRankSum=-5.918;QD=14.07;ReadPosRankSum=2.420;VQSLOD=2.6449;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:55.12:0,55,1210	0/0:7,0:7:20.94:0,21,395	0/0:30,0:15:31.24:0,31,343	0/0:33,0:13:19.66:0,20,225	0/0:24,0:24:63.42:0,63,1344	0/1:27,0:26:7.77:8,0,300	0/0:29,0:28:71.39:0,71,1406	0/0:16,0:16:47.61:0,48,569	0/0:25,0:25:44.32:0,44,891	0/0:22,0:22:64.57:0,65,1716	0/0:22,0:22:54.03:0,54,1375	1/1:0,13:13:6.49:178,6,0	1/1:22,0:22:15.05:346,15,0	1/1:20,0:20:59.90:826,60,0	0/0:16,0:16:45.05:0,45,1146	0/0:25,0:25:60.18:0,60,1736	0/0:23,0:23:64.19:0,64,1418	0/0:19,0:19:49.71:0,50,1223	0/0:10,0:10:26.74:0,27,456	0/0:30,0:29:81.13:0,81,2212	0/0:35,0:35:78.87:0,79,1441	1/1:20,0:20:17.91:312,18,0	1/1:13,0:12:6.96:139,7,0	1/1:11,0:11:6.02:138,6,0	0/0:29,0:28:63.46:0,63,674	0/0:26,0:26:74.02:0,74,1750	0/0:26,0:25:61.27:0,61,1217	0/0:10,0:10:24.01:0,24,357
chr10	80043364	.	AAAACAAAC	A	4379.91	PASS	AB=0.571;AC=19;AF=0.339;AN=56;BaseQRankSum=9.151;DP=463;FS=23.024;HRun=0;HaplotypeScore=118.4438;InbreedingCoeff=0.8968;MQ=66.99;MQ0=0;MQRankSum=-9.921;QD=34.76;ReadPosRankSum=2.037;VQSLOD=2.6627;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:55.79:0,56,1337	0/0:6,0:6:15.03:0,15,532	0/0:15,0:14:31.62:0,32,660	0/0:22,0:18:31.10:0,31,759	0/0:22,0:22:54.18:0,54,2092	1/1:2,14:16:18.06:439,18,0	0/0:20,0:20:48.16:0,48,1762	0/0:32,0:32:81.23:0,81,2880	0/0:14,0:14:36.12:0,36,1466	0/0:17,0:17:42.14:0,42,1759	0/0:14,0:14:36.12:0,36,1410	1/1:1,8:9:12.04:242,12,0	1/1:2,15:17:30.10:794,30,0	1/1:2,16:18:27.09:711,27,0	0/0:21,0:21:42.13:0,42,1389	0/0:21,0:21:57.20:0,57,2139	0/0:17,0:17:45.13:0,45,1701	0/0:11,0:11:24.08:0,24,968	0/0:21,0:21:35.71:0,36,1297	0/0:14,0:14:30.10:0,30,1099	0/0:20,0:20:51.14:0,51,2023	1/1:1,7:8:18.06:325,18,0	1/1:2,6:8:15.05:359,15,0	1/1:5,15:20:8.99:137,9,0	1/1:2,8:9:18.06:325,18,0	1/1:4,12:16:33.58:821,34,0	0/0:22,0:22:57.19:0,57,2084	0/1:1,3:4:45.57:226,0,46
chr10	80043375	.	AC	A	1605.97	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=12.907;DP=422;FS=3.646;HRun=1;HaplotypeScore=63.0186;InbreedingCoeff=0.6849;MQ=64.99;MQ0=0;MQRankSum=-8.449;QD=12.26;ReadPosRankSum=4.736;VQSLOD=2.4008;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:63.21:878,63,0	0/0:6,0:6:18.02:0,18,230	0/0:15,0:14:33.74:0,34,390	0/0:21,0:17:35.53:0,36,515	0/0:18,0:18:54.18:0,54,823	1/1:14,0:14:15.49:89,15,0	0/0:21,0:21:61.74:0,62,891	0/0:29,0:29:87.23:0,87,1246	0/0:15,0:15:42.12:0,42,616	0/0:15,0:15:42.13:0,42,642	0/0:15,0:15:45.12:0,45,641	1/1:8,0:8:11.01:102,11,0	1/1:15,0:15:25.16:95,25,0	1/1:17,0:17:22:82,22,0	0/0:15,0:15:45.12:0,45,639	0/0:21,0:21:63.21:0,63,956	0/0:18,0:18:54.13:0,54,775	0/0:11,0:11:33.11:0,33,492	0/0:18,0:18:53.57:0,54,725	0/0:12,0:12:33.11:0,33,501	0/0:20,0:20:60.17:0,60,881	1/1:7,0:7:17.03:185,17,0	0/1:7,0:7:25.14:63,0,25	0/1:16,0:16:17.87:18,0,49	1/1:8,0:8:17.03:185,17,0	0/1:13,0:13:10.43:90,0,10	0/0:21,0:21:63.21:0,63,960	0/1:4,0:4:6.25:18,0,6
chr10	80043556	.	CAT	C	1073.14	PASS	AC=18;AF=0.600;AN=30;BaseQRankSum=2.537;DP=136;FS=15.275;HRun=0;HaplotypeScore=33.6729;InbreedingCoeff=0.5627;MQ=63.04;MQ0=1;MQRankSum=1.607;QD=12.19;ReadPosRankSum=-1.311;VQSLOD=1.2463;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:4,0:4:3.24:8,3,0	./.	0/0:8,0:5:1.55:0,2,5	0/0:2,0:1:3.01:0,3,35	0/0:2,0:2:3:0,3,26	0/0:3,0:3:9.02:0,9,120	1/1:17,20:37:62.93:707,63,0	1/1:3,0:3:0.85:2,1,0	1/1:3,0:3:5.74:49,6,0	./.	./.	./.	./.	./.	1/1:8,0:8:4.94:18,5,0	0/0:23,1:24:31.07:0,31,938	1/1:9,1:10:6.50:110,6,0	1/1:4,5:9:14.07:150,14,0	./.	1/1:2,3:5:3.01:37,3,0	./.	./.	./.	0/0:2,0:2:3:0,3,25	./.	1/1:2,7:9:9.03:110,9,0	./.
chr10	80043558	.	T	TAC	456.15	PASS	AB=1.000;AC=14;AF=0.412;AN=34;BaseQRankSum=1.133;DP=138;FS=1.756;HRun=0;HaplotypeScore=38.4043;InbreedingCoeff=0.2279;MQ=62.81;MQ0=1;MQRankSum=1.488;QD=5.37;ReadPosRankSum=-2.140;VQSLOD=1.9845;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:2.99:0,3,23	1/1:3,1:4:8.34:68,8,0	./.	0/0:8,0:5:2.68:0,3,11	0/0:2,0:1:3.01:0,3,33	0/0:2,0:2:4.81:0,5,30	0/0:3,0:3:9.03:0,9,134	0/1:36,0:36:17.35:17,0,351	1/1:4,0:4:7.53:51,8,0	0/1:3,0:3:5.54:56,0,6	./.	./.	./.	./.	1/1:1,0:1:2.99:24,3,0	1/1:1,7:8:5.69:115,6,0	0/0:24,0:24:67.74:0,68,998	1/1:11,0:11:9.82:188,10,0	0/1:7,0:7:42.71:43,0,60	./.	0/0:5,0:5:8.35:0,8,55	./.	./.	./.	0/0:2,0:2:3:0,3,25	./.	0/1:11,0:11:19.43:19,0,60	./.
chr10	80043683	.	A	ATC	3778.81	PASS	AC=20;AF=0.385;AN=52;BaseQRankSum=8.559;DP=217;FS=23.387;HRun=0;HaplotypeScore=34.3800;InbreedingCoeff=0.8785;MQ=84.30;MQ0=0;MQRankSum=-1.443;QD=54.77;ReadPosRankSum=2.884;VQSLOD=2.1733;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:33.11:670,33,0	0/0:1,0:1:3.01:0,3,49	0/0:8,0:8:18.06:0,18,292	0/0:5,0:5:15.05:0,15,216	0/0:12,0:12:36.12:0,36,587	1/1:0,10:10:30.10:610,30,0	0/0:2,0:2:6.02:0,6,98	0/0:32,0:32:96.31:0,96,1522	./.	0/0:4,0:4:12.04:0,12,196	0/0:10,0:10:30.10:0,30,485	1/1:0,2:2:6.02:122,6,0	1/1:0,6:6:15.05:305,15,0	1/1:0,3:3:9.03:183,9,0	0/0:2,0:2:6.02:0,6,98	0/0:3,0:3:9.03:0,9,147	0/0:22,0:22:63.21:0,63,1018	0/0:8,0:8:24.08:0,24,392	0/0:6,0:6:18.06:0,18,287	0/0:7,0:7:21.07:0,21,343	0/0:8,0:8:24.08:0,24,389	./.	1/1:1,9:10:24.07:487,24,0	1/1:0,10:10:27.09:549,27,0	1/1:0,3:3:9.03:183,9,0	1/1:0,7:7:21.07:427,21,0	0/0:18,0:18:54.18:0,54,881	1/1:0,4:5:12.04:244,12,0
chr10	80044040	.	GGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	G	210.80	PASS	AB=1.000;AC=3;AF=0.058;AN=52;BaseQRankSum=3.045;DP=424;FS=2.721;HRun=0;HaplotypeScore=322.4587;InbreedingCoeff=0.3164;MQ=54.97;MQ0=20;MQRankSum=1.762;QD=7.53;ReadPosRankSum=-0.647;VQSLOD=1.8673;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:21:21.05:0,21,1768	0/0:4,0:3:6.02:0,6,971	./.	./.	0/0:24,0:22:9.03:0,9,1134	0/0:20,0:18:18.06:0,18,1693	0/0:11,0:11:3.01:0,3,107	0/0:27,0:27:44.36:0,44,1889	0/0:12,0:11:12.04:0,12,426	0/0:13,0:12:12.04:0,12,1045	0/0:20,0:19:30.09:0,30,2361	0/0:22,0:22:33.10:0,33,2142	0/0:12,0:12:6.02:0,6,512	0/0:17,0:17:18.06:0,18,1186	0/0:15,0:13:15.03:0,15,584	0/0:7,0:7:15.05:0,15,720	0/0:23,0:23:40.69:0,41,2972	0/0:8,0:8:20.28:0,20,594	0/0:11,0:9:13.44:0,13,507	0/0:11,0:10:9.02:0,9,840	0/0:16,0:14:6.02:0,6,789	0/0:6,0:6:3.01:0,3,306	0/0:15,0:15:6.02:0,6,496	0/0:12,0:12:15.05:0,15,1189	0/0:11,0:9:9.03:0,9,535	1/1:10,5:14:14.91:292,15,0	0/0:17,0:17:20.64:0,21,848	0/1:13,0:9:16.98:17,0,382
chr10	80045495	.	AGT	A	1385.60	PASS	AB=0.889;AC=27;AF=0.500;AN=54;BaseQRankSum=9.444;DP=353;FS=2.970;HRun=0;HaplotypeScore=46.7161;InbreedingCoeff=0.4052;MQ=64.21;MQ0=5;MQRankSum=0.985;QD=6.00;ReadPosRankSum=4.591;VQSLOD=2.3339;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:15.03:0,15,206	0/0:4,0:4:5.86:0,6,91	0/0:10,0:4:3.01:0,3,46	./.	0/0:7,0:6:9.03:0,9,136	1/1:9,0:22:28.41:140,28,0	0/0:8,0:8:6.02:0,6,91	0/0:29,0:29:30.08:0,30,433	0/1:13,2:15:36.93:37,0,333	0/1:16,1:17:0.42:0,0,409	0/1:6,1:7:15.46:15,0,209	1/1:2,5:7:15.04:168,15,0	1/1:5,1:6:3.01:34,3,0	1/1:4,11:15:30.08:335,30,0	0/0:14,0:14:11.71:0,12,476	0/0:6,0:6:12.04:0,12,182	0/1:20,1:23:8.55:9,0,427	0/1:4,1:5:27.50:28,0,39	0/0:8,0:8:3.01:0,3,46	0/1:14,3:17:3.69:4,0,357	0/1:30,3:33:61.42:61,0,414	1/1:2,5:8:14.87:148,15,0	1/1:5,7:12:21.06:235,21,0	1/1:4,4:9:11.87:115,12,0	1/1:6,0:13:19.89:98,20,0	1/1:3,0:6:8.52:42,9,0	0/0:14,0:14:24.05:0,24,322	1/1:9,1:16:17.68:104,18,0
chr10	80048935	.	C	CT	1942.65	PASS	AB=0.930;AC=14;AF=0.250;AN=56;BaseQRankSum=-10.649;DP=499;FS=1.539;HRun=10;HaplotypeScore=50.5718;InbreedingCoeff=0.8360;MQ=68.89;MQ0=0;MQRankSum=0.402;QD=16.60;ReadPosRankSum=0.258;VQSLOD=3.8277;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:41.95:0,42,345	0/0:5,0:5:14.98:0,15,123	0/1:14,1:12:1.89:2,0,91	0/0:9,0:7:13.79:0,14,102	0/0:25,1:27:33.20:0,33,463	0/0:30,1:30:51.91:0,52,633	0/0:15,0:15:38.95:0,39,320	0/0:26,0:29:63.02:0,63,483	0/0:17,0:17:44.87:0,45,361	0/0:34,2:37:21.94:0,22,578	0/0:24,0:25:55.93:0,56,446	1/1:0,15:15:41.84:448,42,0	1/1:1,12:13:26.81:268,27,0	1/1:2,9:11:21.05:224,21,0	0/0:14,0:14:19.35:0,19,170	0/0:6,0:6:14.98:0,15,123	0/0:16,1:17:9.97:0,10,288	0/0:18,0:18:29.93:0,30,246	0/0:11,0:11:20.94:0,21,170	0/0:25,1:27:17.95:0,18,343	0/1:9,1:12:0.94:1,0,178	1/1:5,14:19:41.86:416,42,0	1/1:3,14:17:36.09:384,36,0	1/1:0,15:15:36.09:384,36,0	0/0:17,0:18:46.98:0,47,375	0/0:20,0:20:47.91:0,48,389	0/0:27,0:27:74.86:0,75,607	0/0:12,1:13:3.96:0,4,239
chr10	80050784	.	G	GA	9667.34	PASS	AB=0.556;AC=33;AF=0.589;AN=56;BaseQRankSum=-14.646;DP=612;FS=7.590;HRun=9;HaplotypeScore=57.8135;InbreedingCoeff=0.9118;MQ=71.13;MQ0=0;MQRankSum=-1.156;QD=25.71;ReadPosRankSum=-1.563;VQSLOD=4.9296;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:32.99:0,33,286	1/1:1,9:10:4.64:243,5,0	0/0:13,0:14:20.50:0,21,271	0/0:15,0:15:32.97:0,33,282	1/1:2,25:27:72.19:796,72,0	0/0:26,0:26:68.97:0,69,599	1/1:3,11:14:30.08:332,30,0	1/1:5,24:29:66.15:712,66,0	1/1:4,17:21:48.13:531,48,0	1/1:8,23:31:66.13:703,66,0	1/1:3,23:27:48.90:725,49,0	0/0:30,1:31:52.05:0,52,672	0/0:25,0:25:51.74:0,52,533	0/0:22,0:22:50.98:0,51,443	1/1:1,19:20:57.15:631,57,0	1/1:1,15:16:42.11:465,42,0	1/1:0,13:13:33.09:365,33,0	1/1:1,14:15:36.10:398,36,0	1/1:2,16:18:45.11:489,45,0	1/1:6,34:40:99:1069,99,0	1/1:2,14:16:33.09:365,33,0	0/0:23,0:23:24.75:0,25,391	0/0:28,0:28:53.50:0,54,627	0/0:13,0:13:38.99:0,39,339	0/0:27,0:27:68.92:0,69,599	1/1:9,21:30:63.17:697,63,0	1/1:9,35:44:73.21:1031,73,0	0/1:1,4:5:10.99:118,0,11
chr10	80052302	.	A	ATGTGTG	3049.26	PASS	AB=1.000;AC=23;AF=0.442;AN=52;BaseQRankSum=7.602;DP=606;FS=1.783;HRun=0;HaplotypeScore=130.7555;InbreedingCoeff=0.7995;MQ=61.58;MQ0=9;MQRankSum=-3.760;QD=11.25;ReadPosRankSum=0.608;VQSLOD=2.4049;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:18:3.01:65,3,0	0/0:12,0:12:24.08:0,24,498	./.	0/0:19,0:15:0.28:0,0,58	0/0:24,0:25:48.13:0,48,900	1/1:14,0:26:12.04:313,12,0	0/0:27,0:25:38.98:0,39,633	0/0:29,0:29:24:0,24,383	0/0:19,0:18:36.09:0,36,632	0/0:25,0:25:31.01:0,31,742	0/0:21,0:21:45.12:0,45,823	1/1:5,0:21:13.22:188,13,0	1/1:15,1:31:42.14:573,42,0	1/1:5,0:21:21.07:273,21,0	0/0:12,0:12:21.06:0,21,398	0/0:24,0:24:42.14:0,42,869	0/1:15,0:14:24.59:25,0,175	./.	0/0:19,0:18:7.68:0,8,199	0/0:28,0:28:54.03:0,54,996	0/0:14,0:13:16.91:0,17,321	1/1:7,11:25:18.06:527,18,0	1/1:6,0:23:20.65:267,21,0	1/1:9,0:31:34.52:459,35,0	1/1:10,0:17:6.02:157,6,0	1/1:23,0:23:15.01:327,15,0	0/0:22,0:22:48.14:0,48,956	1/1:16,0:15:5.93:75,6,0
chr10	80052402	.	AAG	A	2915.62	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=4.336;DP=526;FS=4.400;HRun=0;HaplotypeScore=87.3464;InbreedingCoeff=0.8901;MQ=59.75;MQ0=32;MQRankSum=2.178;QD=15.85;ReadPosRankSum=0.728;VQSLOD=3.4305;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:14.76:236,15,0	0/0:5,0:5:15.05:0,15,236	0/0:21,0:11:20.53:0,21,179	0/0:43,0:17:5.62:0,6,77	0/0:31,0:31:57.19:0,57,867	0/1:16,0:15:0.11:1,0,0	0/0:24,0:20:42.79:0,43,633	0/0:22,0:21:50.61:0,51,692	0/0:13,0:13:18.06:0,18,264	0/0:22,0:22:38.48:0,38,560	0/0:20,0:18:24.08:0,24,377	1/1:16,0:16:24.07:283,24,0	1/1:17,2:17:32.89:359,33,0	1/1:17,0:16:29.76:365,30,0	0/0:19,0:18:2.67:0,3,514	0/0:18,0:18:34.93:0,35,523	0/0:13,0:10:16.29:0,16,207	0/0:13,0:10:22.94:0,23,324	0/0:8,0:7:15.05:0,15,213	0/0:29,0:28:50.52:0,51,731	0/0:21,0:17:36.12:0,36,531	1/1:23,1:22:40.55:464,41,0	1/1:15,0:15:27.05:328,27,0	1/1:21,1:20:38.17:377,38,0	1/1:6,0:6:1.98:6,2,0	1/1:5,16:18:47.77:522,48,0	0/0:17,0:15:31.65:0,32,427	1/1:7,0:5:15.05:182,15,0
chr10	80052863	.	GAAT	G	1513.57	PASS	AB=0.871;AC=6;AF=0.107;AN=56;BaseQRankSum=8.716;DP=510;FS=0.000;HRun=0;HaplotypeScore=69.0929;InbreedingCoeff=0.5273;MQ=65.82;MQ0=0;MQRankSum=0.059;QD=20.73;ReadPosRankSum=1.509;VQSLOD=3.3402;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.19:0,57,1127	0/0:9,0:9:21.07:0,21,430	0/0:7,0:7:6.02:0,6,107	0/0:2,0:2:2.98:0,3,22	0/0:31,0:31:72.25:0,72,1448	1/1:3,18:21:48.12:671,48,0	0/0:10,0:10:21.07:0,21,430	0/0:24,0:24:36.12:0,36,729	0/0:14,0:14:39.13:0,39,797	0/0:26,0:26:63.22:0,63,1269	0/0:24,0:24:60.21:0,60,1228	0/0:13,0:13:30.10:0,30,612	0/0:15,0:15:36.12:0,36,737	0/0:20,0:20:48.14:0,48,931	0/0:19,0:19:51.18:0,51,1044	0/0:14,0:14:36.11:0,36,695	0/0:18,0:18:33.11:0,33,675	0/0:25,1:26:16.83:0,17,1114	0/1:11,2:12:62.72:63,0,313	0/0:28,0:28:72.23:0,72,1410	0/0:8,0:8:24.08:0,24,491	0/1:12,2:14:47.68:48,0,582	0/0:17,1:18:4.77:0,5,878	0/0:6,0:6:18.06:0,18,368	1/1:4,21:25:60.20:868,60,0	0/0:32,0:32:81.28:0,81,1659	0/0:31,2:32:28.85:0,29,1369	0/0:18,0:18:51.17:0,51,1005
chr10	80054154	.	A	AT	2768.93	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.213;DP=570;FS=3.886;HRun=8;HaplotypeScore=49.9573;InbreedingCoeff=0.9534;MQ=69.08;MQ0=2;MQRankSum=0.908;QD=24.29;ReadPosRankSum=3.262;VQSLOD=4.3681;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.04:0,84,767	0/0:6,0:6:8.99:0,9,82	0/0:11,0:8:12:0,12,109	0/0:12,0:11:11.95:0,12,154	0/0:21,0:21:57.03:0,57,519	0/0:25,0:24:72.04:0,72,658	0/0:17,0:17:45:0,45,407	0/0:33,0:33:75.03:0,75,686	0/0:17,0:17:51.03:0,51,466	0/0:35,0:35:96.04:0,96,879	0/0:18,0:18:54.03:0,54,494	1/1:3,14:18:17.66:432,18,0	1/1:4,12:16:30.09:346,30,0	1/1:4,18:22:42.12:485,42,0	0/0:22,0:22:54.03:0,54,494	0/0:20,0:20:57.02:0,57,521	0/0:25,0:25:60.02:0,60,549	0/0:13,0:13:36.02:0,36,329	0/0:29,0:29:84.04:0,84,769	0/0:33,0:33:84.02:0,84,769	0/0:14,0:14:39.02:0,39,357	1/1:0,20:20:51.15:586,51,0	1/1:2,19:21:57.17:658,57,0	1/1:3,14:16:39.12:450,39,0	0/0:26,0:26:62.99:0,63,571	0/0:23,0:24:71.07:0,71,633	0/0:23,0:23:69.04:0,69,631	0/0:2,0:2:6:0,6,55
chr10	80054818	.	CTT	C	499.74	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.490;DP=366;FS=0.000;HRun=4;HaplotypeScore=42.8103;InbreedingCoeff=0.9083;MQ=74.71;MQ0=0;MQRankSum=0.813;QD=27.76;ReadPosRankSum=-1.378;VQSLOD=1.3796;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:30.10:0,30,562	0/0:6,0:6:18.05:0,18,306	0/0:5,0:5:9:0,9,131	0/0:11,0:10:23.95:0,24,382	0/0:19,0:19:57.20:0,57,1068	0/0:15,0:15:45.11:0,45,801	0/0:8,0:8:21.06:0,21,352	0/0:40,0:40:99:0,112,1952	0/0:7,0:7:21.07:0,21,387	0/0:18,0:18:51.15:0,51,916	0/0:21,0:21:60.21:0,60,1123	0/0:12,0:12:36.12:0,36,675	0/0:8,0:8:24.08:0,24,444	0/0:11,0:11:24.08:0,24,408	0/0:11,0:11:33.11:0,33,608	0/0:9,0:9:27.09:0,27,500	0/0:8,0:8:24.08:0,24,450	0/0:16,0:16:39.20:0,39,782	0/0:15,0:15:39.13:0,39,724	0/0:27,0:27:78.24:0,78,1391	0/0:5,0:5:15.05:0,15,281	0/0:7,0:7:18.06:0,18,321	0/0:13,0:13:33.10:0,33,581	0/0:5,0:5:15.05:0,15,281	0/0:14,0:14:42.12:0,42,754	1/1:1,13:14:33.11:481,33,0	0/0:26,0:26:78.23:0,78,1399	1/1:0,4:4:9.03:132,9,0
chr10	80058544	.	T	TAAAA	217.82	PASS	AC=2;AF=0.045;AN=44;BaseQRankSum=3.358;DP=338;FS=2.440;HRun=1;HaplotypeScore=25.4430;InbreedingCoeff=0.4436;MQ=27.60;MQ0=126;MQRankSum=-3.079;QD=31.12;ReadPosRankSum=0.140;VQSLOD=0.8127;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:10:24.01:0,24,404	./.	./.	./.	0/0:8,0:4:9.01:0,9,110	./.	./.	0/0:32,0:2:5.99:0,6,84	0/0:11,0:6:8.96:0,9,143	0/0:11,0:7:21.07:0,21,440	0/0:15,0:12:27.03:0,27,472	0/0:10,0:4:8.96:0,9,143	0/0:17,0:9:11.93:0,12,204	0/0:18,0:9:15.05:0,15,287	./.	0/0:8,0:5:3.01:0,3,63	0/0:8,0:6:9.03:0,9,162	0/0:5,0:2:6.02:0,6,125	0/0:15,0:4:9.03:0,9,172	0/0:11,0:9:24.08:0,24,498	0/0:11,0:10:30.10:0,30,563	0/0:11,0:8:21.07:0,21,366	0/0:11,0:8:11.97:0,12,169	0/0:4,0:4:12.04:0,12,227	1/1:3,4:6:10.94:301,11,0	0/0:21,0:12:33.07:0,33,625	0/0:12,0:3:5.98:0,6,83	0/0:7,0:4:9.02:0,9,189
chr10	80058598	.	TC	T	503.59	PASS	AC=26;AF=1.000;AN=26;DP=121;FS=0.000;HRun=1;HaplotypeScore=14.2183;InbreedingCoeff=-0.1192;MQ=18.72;MQ0=16;QD=6.46;VQSLOD=0.3470;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	1/1:0,9:6:17.77:118,18,0	./.	1/1:0,2:1:2.94:18,3,0	1/1:0,11:2:3:25,3,0	1/1:1,4:1:2.99:24,3,0	1/1:2,3:3:3:25,3,0	1/1:0,2:2:5.97:44,6,0	./.	1/1:0,4:4:2.99:24,3,0	./.	1/1:0,3:1:2.98:21,3,0	./.	1/1:0,14:6:8.98:73,9,0	./.	1/1:0,5:2:3:25,3,0	./.	./.	1/1:1,4:5:12.86:98,13,0	1/1:0,7:3:5.91:39,6,0	1/1:1,5:2:5.96:43,6,0	./.
chr10	80059816	.	T	TAC	1488.33	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.421;DP=699;FS=3.338;HRun=0;HaplotypeScore=82.1180;InbreedingCoeff=0.9998;MQ=68.14;MQ0=1;MQRankSum=-0.391;QD=37.21;ReadPosRankSum=2.124;VQSLOD=6.0505;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:64.07:0,64,1163	0/0:15,0:15:42.13:0,42,545	0/0:36,0:28:54.15:0,54,673	0/0:32,0:27:65.95:0,66,815	0/0:40,0:40:99:0,108,1420	1/1:0,21:21:51.17:883,51,0	0/0:23,0:23:60.65:0,61,770	0/0:32,0:32:78.24:0,78,1011	0/0:11,0:11:33.11:0,33,439	0/0:39,0:39:99:0,102,1341	0/0:22,0:22:57.17:0,57,730	0/0:25,0:25:72.21:0,72,927	0/0:27,0:27:69.23:0,69,918	0/0:24,0:24:66.22:0,66,878	0/0:24,0:24:63.21:0,63,838	0/0:17,0:17:48.16:0,48,638	0/0:21,0:21:57.19:0,57,757	0/0:23,0:23:57.08:0,57,698	0/0:25,0:25:51.02:0,51,638	0/0:24,0:24:69.23:0,69,917	0/0:25,0:25:69.23:0,69,918	0/0:19,0:19:51.12:0,51,644	0/0:25,0:25:66.20:0,66,862	0/0:17,0:17:43.02:0,43,561	1/1:1,18:19:42.14:727,42,0	0/0:36,0:36:96.31:0,96,1264	0/0:25,0:25:72.22:0,72,940	0/0:14,0:14:42.10:0,42,535
chr10	80060231	.	G	GC	4813.58	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.876;DP=619;FS=0.370;HRun=4;HaplotypeScore=63.4481;InbreedingCoeff=0.9975;MQ=83.65;MQ0=0;MQRankSum=-1.123;QD=36.19;ReadPosRankSum=1.694;VQSLOD=5.2113;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:54.54:0,55,577	0/0:13,0:13:39.10:0,39,433	0/0:26,0:27:55.95:0,56,602	0/0:19,0:19:24.90:0,25,325	0/0:34,0:34:99:0,99,1123	0/0:20,0:20:56.09:0,56,370	0/0:17,0:17:42.12:0,42,477	0/0:23,0:23:57.13:0,57,629	0/0:21,0:21:60.17:0,60,681	0/0:27,0:27:72.20:0,72,816	0/0:24,0:24:69.20:0,69,783	1/1:1,16:17:42.14:574,42,0	1/1:2,24:27:72.23:974,72,0	1/1:3,31:34:87.29:1183,87,0	0/0:20,0:20:60.17:0,60,681	0/0:16,0:16:48.14:0,48,544	0/0:20,0:20:51.15:0,51,579	0/0:6,0:6:18.05:0,18,204	0/0:25,0:25:69.18:0,69,772	0/0:37,0:37:99:0,102,1157	0/0:28,0:28:78.19:0,78,863	1/1:1,14:15:38.75:533,39,0	1/1:1,17:18:54.18:727,54,0	1/1:1,21:22:60.20:821,60,0	0/0:12,0:12:35.60:0,36,242	0/0:29,0:29:87.25:0,87,987	0/0:23,0:23:66.19:0,66,748	0/0:9,0:9:24.07:0,24,272
chr10	80061434	.	CATT	C	1562.46	PASS	AB=0.512;AC=3;AF=0.054;AN=56;BaseQRankSum=8.208;DP=540;FS=8.084;HRun=0;HaplotypeScore=92.9872;InbreedingCoeff=0.7809;MQ=80.91;MQ0=0;MQRankSum=-3.575;QD=43.40;ReadPosRankSum=-0.731;VQSLOD=4.7169;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:18.06:0,18,415	0/0:16,0:16:45.14:0,45,991	0/0:15,0:15:42.14:0,42,933	0/0:12,0:12:36.07:0,36,684	0/0:17,0:17:48.16:0,48,1104	0/0:21,0:21:63.19:0,63,1366	0/0:11,0:11:33.10:0,33,718	0/0:33,0:33:96.32:0,96,2118	0/0:21,0:21:63.21:0,63,1410	0/0:20,0:20:60.19:0,60,1288	0/0:14,0:14:39.13:0,39,898	0/0:26,0:26:78.24:0,78,1658	0/0:26,0:26:78.24:0,78,1675	0/0:19,0:19:54.17:0,54,1185	0/0:33,0:33:93.28:0,93,1984	0/0:21,0:21:60.21:0,60,1348	0/0:17,0:17:51.15:0,51,1100	0/0:8,0:8:21.07:0,21,484	0/0:11,0:11:33.10:0,33,719	0/0:24,0:24:72.25:0,72,1626	0/0:23,0:23:69.21:0,69,1458	0/0:15,0:15:45.15:0,45,1016	0/0:10,0:10:30.10:0,30,672	0/0:19,0:19:54.19:0,54,1245	0/0:18,0:18:54.19:0,54,1245	0/1:1,21:22:3:953,0,3	0/0:45,0:45:99:0,135,2927	1/1:0,14:14:42.14:715,42,0
chr10	80062338	.	TA	T	636.75	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.311;DP=683;FS=0.000;HRun=2;HaplotypeScore=66.5436;InbreedingCoeff=0.9920;MQ=71.94;MQ0=0;MQRankSum=-2.747;QD=28.94;ReadPosRankSum=-0.353;VQSLOD=2.9604;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:57.18:732,57,0	0/0:13,0:13:39.12:0,39,566	0/0:23,0:23:63.07:0,63,910	0/0:23,0:23:62.07:0,62,893	0/0:35,0:35:99:0,99,1469	0/0:30,0:30:87.29:0,87,1300	0/0:16,0:16:48.16:0,48,717	0/0:36,0:36:99:0,105,1502	0/0:29,0:29:84.27:0,84,1239	0/0:34,0:34:99:0,99,1465	0/0:32,0:32:96.30:0,96,1397	0/0:16,0:16:48.16:0,48,719	0/0:36,0:36:99:0,105,1537	0/0:16,0:16:45.13:0,45,632	0/0:28,0:28:81.27:0,81,1214	0/0:23,0:23:69.21:0,69,995	0/0:16,0:16:48.16:0,48,719	0/0:22,0:22:66.17:0,66,937	0/0:22,0:22:66.22:0,66,971	0/0:31,0:31:93.31:0,93,1386	0/0:20,0:20:57.08:0,57,785	0/0:28,0:28:84.27:0,84,1219	0/0:30,0:30:84.27:0,84,1237	0/0:19,0:19:57.19:0,57,852	0/0:25,0:25:69.23:0,69,1034	0/0:20,0:20:60.20:0,60,898	0/0:32,0:32:96.32:0,96,1425	0/0:6,0:6:18.06:0,18,270
chr10	80062508	.	T	TG	1407.17	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.234;DP=733;FS=9.455;HRun=1;HaplotypeScore=74.2501;InbreedingCoeff=0.9989;MQ=69.09;MQ0=0;MQRankSum=-1.186;QD=34.32;ReadPosRankSum=1.537;VQSLOD=2.9477;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1473	0/0:9,0:9:27.09:0,27,351	0/0:24,0:23:60.10:0,60,704	0/0:22,0:22:61.92:0,62,684	0/0:19,0:19:57.17:0,57,724	1/1:2,15:17:42.14:629,42,0	0/0:30,0:30:84.27:0,84,1087	0/0:34,0:34:93.29:0,93,1184	0/0:32,0:32:96.31:0,96,1247	0/0:18,0:18:54.18:0,54,699	0/0:17,0:17:48.14:0,48,608	0/0:23,0:23:60.19:0,60,779	0/0:38,0:38:99:0,108,1388	0/0:21,0:21:60.17:0,60,750	0/0:35,0:35:99:0,102,1309	0/0:32,0:32:96.31:0,96,1247	0/0:19,0:19:57.19:0,57,738	0/0:26,0:26:74.60:0,75,939	0/0:23,0:22:63.20:0,63,816	0/0:34,0:34:99:0,99,1284	0/0:45,0:45:99:0,129,1672	0/0:16,0:16:48.16:0,48,622	0/0:26,0:26:75.24:0,75,953	0/0:41,0:41:99:0,117,1518	1/1:2,22:24:60.20:899,60,0	0/0:27,0:27:78.24:0,78,989	0/0:32,0:32:93.29:0,93,1193	0/0:9,0:9:27.09:0,27,351
chr10	80062608	.	CA	C	1381.12	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.695;DP=674;FS=2.867;HRun=2;HaplotypeScore=67.1214;InbreedingCoeff=0.9813;MQ=60.78;MQ0=3;MQRankSum=0.953;QD=32.12;ReadPosRankSum=1.537;VQSLOD=3.4974;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1618	0/0:8,0:8:24.05:0,24,337	0/0:36,0:28:67.44:0,67,1087	0/0:32,0:26:75.22:0,75,1088	0/0:17,0:17:51.17:0,51,763	1/1:1,23:24:66.21:857,66,0	0/0:23,0:23:60.20:0,60,898	0/0:41,0:41:99:0,114,1654	0/0:18,0:18:54.16:0,54,770	0/0:24,0:24:72.23:0,72,1044	0/0:17,0:17:48.12:0,48,677	0/0:27,0:27:81.27:0,81,1213	0/0:32,0:32:93.31:0,93,1374	0/0:23,0:23:69.22:0,69,1015	0/0:27,0:27:81.27:0,81,1210	0/0:20,0:20:57.19:0,57,854	0/0:22,0:22:66.22:0,66,985	0/0:24,0:24:69.17:0,69,985	0/0:18,0:17:51.12:0,51,703	0/0:34,0:34:99:0,99,1444	0/0:34,0:34:98.84:0,99,1445	0/0:24,0:24:66.20:0,66,940	0/0:12,0:12:36.12:0,36,538	0/0:19,1:20:21.23:0,21,776	1/1:3,16:19:51.14:646,51,0	0/0:28,0:28:84.27:0,84,1221	0/0:27,0:26:75.23:0,75,1082	0/0:5,0:5:12.04:0,12,180
chr10	80064172	.	AT	A	122.25	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.351;DP=469;FS=3.038;HRun=7;HaplotypeScore=43.5267;InbreedingCoeff=0.7531;MQ=62.57;MQ0=0;MQRankSum=0.179;QD=12.23;ReadPosRankSum=-0.441;VQSLOD=1.7912;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.21:0,66,827	0/0:9,0:9:24.05:0,24,286	0/0:10,0:9:6.61:0,7,176	0/0:6,0:4:12.03:0,12,141	0/0:23,0:23:69.17:0,69,817	0/0:27,0:27:72.21:0,72,881	1/1:1,9:10:21.05:214,21,0	0/0:40,0:40:99:0,108,1317	0/0:8,0:8:21.07:0,21,264	0/0:22,0:21:63.19:0,63,771	0/0:19,0:19:54.16:0,54,666	0/0:11,0:11:27.07:0,27,325	0/0:13,0:13:39.12:0,39,478	0/0:11,0:11:30.10:0,30,374	0/0:13,0:13:36.11:0,36,441	0/0:18,0:18:45.13:0,45,553	0/0:27,0:27:60.17:0,60,739	0/0:31,0:31:73.18:0,73,1007	0/0:15,0:15:42.13:0,42,525	0/0:20,0:20:60.17:0,60,729	0/0:2,0:2:3.01:0,3,38	0/0:9,0:9:21.07:0,21,264	0/0:12,0:12:33.11:0,33,414	0/0:8,0:8:21.02:0,21,246	0/0:25,0:25:66.20:0,66,817	0/0:19,0:19:54.17:0,54,679	0/0:27,0:27:75.24:0,75,943	0/0:10,0:10:30.10:0,30,377
chr10	80064967	.	GTCCT	G	10055.23	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.634;DP=694;FS=32.979;HRun=0;HaplotypeScore=122.3432;InbreedingCoeff=0.9898;MQ=77.80;MQ0=1;MQRankSum=-5.102;QD=50.78;ReadPosRankSum=6.028;VQSLOD=3.6751;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,3129	0/0:8,0:8:24.08:0,24,693	0/0:19,0:18:50.92:0,51,1034	0/0:24,0:24:58.33:0,58,1056	0/0:13,0:13:36.59:0,37,1030	1/1:0,25:25:51.18:1069,51,0	0/0:34,0:34:99:0,102,2924	0/0:31,0:31:81.28:0,81,2343	0/0:21,0:21:63.22:0,63,1819	0/0:26,0:26:75.26:0,75,2134	0/0:18,0:18:54.19:0,54,1552	1/1:0,29:29:78.27:1633,78,0	1/1:0,31:31:84.29:1760,84,0	1/1:0,30:30:72.25:1509,72,0	0/0:36,0:36:99:0,108,3064	0/0:25,0:25:72.25:0,72,2081	0/0:39,0:39:99:0,117,3388	0/0:24,0:24:72.25:0,72,2033	0/0:22,0:22:57.18:0,57,1520	0/0:14,0:14:42.14:0,42,1211	0/0:44,0:44:99:0,129,3603	1/1:0,23:23:57.20:1194,57,0	1/1:0,25:25:57.20:1195,57,0	1/1:0,23:23:54.19:1129,54,0	1/1:1,11:12:27.09:566,27,0	0/0:27,0:27:81.28:0,81,2311	0/0:32,0:32:96.31:0,96,2707	0/0:3,0:3:9.03:0,9,260
chr10	80066132	.	G	GAA	2007.76	PASS	AB=0.933;AC=13;AF=0.232;AN=56;BaseQRankSum=-0.247;DP=531;FS=0.506;HRun=11;HaplotypeScore=74.9146;InbreedingCoeff=0.8755;MQ=71.96;MQ0=2;MQRankSum=-0.622;QD=17.31;ReadPosRankSum=-0.389;VQSLOD=2.4114;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:68.73:0,69,816	0/0:6,0:6:15:0,15,145	0/0:13,0:14:23.12:0,23,164	0/1:13,0:11:1.85:2,0,56	0/0:29,0:29:72.02:0,72,697	0/0:22,0:23:50.75:0,51,470	0/0:16,0:16:42.01:0,42,401	0/0:25,0:26:50.71:0,51,468	0/0:12,0:13:26.73:0,27,245	0/0:24,0:24:48.02:0,48,461	0/0:21,0:25:47.66:0,48,497	1/1:4,17:21:30.10:431,30,0	1/1:3,5:9:24.05:281,24,0	1/1:2,16:18:34.88:450,35,0	0/0:19,0:19:17.36:0,17,353	0/0:18,0:18:38.90:0,39,378	0/0:22,0:23:53.71:0,54,498	0/0:9,0:9:2.34:0,2,164	0/0:13,0:14:32.74:0,33,303	0/0:28,0:31:47.86:0,48,565	0/0:9,0:10:26.78:0,27,245	1/1:2,12:16:35.60:466,36,0	1/1:5,12:20:25.98:316,26,0	1/1:6,8:16:18.06:246,18,0	0/0:21,0:21:35.87:0,36,333	0/0:28,0:28:50.93:0,51,494	0/0:25,0:25:56.94:0,57,542	0/0:2,0:2:6.01:0,6,58
chr10	80066693	.	TC	T	344.41	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.739;DP=480;FS=0.853;HRun=9;HaplotypeScore=60.3836;InbreedingCoeff=0.9821;MQ=73.31;MQ0=0;MQRankSum=0.179;QD=18.13;ReadPosRankSum=0.038;VQSLOD=3.5931;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:48.02:439,48,0	0/0:8,0:8:18.05:0,18,208	0/0:21,0:18:26.88:0,27,278	0/0:21,0:21:33.87:0,34,330	0/0:27,0:27:75.21:0,75,856	0/0:20,0:20:51.10:0,51,549	0/0:12,0:12:27.08:0,27,312	0/0:24,0:24:60.10:0,60,650	0/0:13,0:13:36.09:0,36,405	0/0:17,0:17:47.33:0,47,510	0/0:22,0:22:57.17:0,57,658	0/0:15,0:15:42.29:0,42,204	0/0:16,0:16:39.41:0,39,192	0/0:19,0:19:53.90:0,54,268	0/0:19,0:19:41.31:0,41,576	0/0:11,0:11:30.08:0,30,336	0/0:21,0:21:60.18:0,60,690	0/0:8,0:8:24.07:0,24,276	0/0:12,0:12:33.10:0,33,381	0/0:22,1:23:32.71:0,33,630	0/0:17,0:17:39.09:0,39,430	0/0:12,0:12:31.81:0,32,175	0/0:17,0:17:34.03:0,34,166	0/0:12,0:12:21.33:0,21,115	0/0:17,0:17:42.12:0,42,485	0/0:15,0:15:42.12:0,42,477	0/0:29,0:28:78.21:0,78,884	0/0:12,0:12:36.08:0,36,394
chr10	80066966	.	C	CT	7440.79	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=4.631;DP=601;FS=0.000;HRun=6;HaplotypeScore=64.9396;InbreedingCoeff=0.9995;MQ=82.64;MQ0=0;MQRankSum=0.115;QD=34.77;ReadPosRankSum=2.267;VQSLOD=4.5075;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.07:0,42,420	0/0:13,0:13:36.07:0,36,361	0/0:26,0:26:54.11:0,54,549	0/0:9,0:9:24.05:0,24,245	0/0:32,0:32:90.18:0,90,910	1/1:0,19:19:54.17:679,54,0	0/0:19,0:19:54.12:0,54,551	0/0:42,0:42:96.20:0,96,979	0/0:21,0:21:60.14:0,60,612	0/0:26,0:26:69.15:0,69,699	0/0:14,0:14:42.10:0,42,428	1/1:0,16:16:48.15:604,48,0	1/1:0,29:29:81.26:1019,81,0	1/1:0,19:19:54.17:679,54,0	0/0:26,0:25:69.15:0,69,704	0/0:19,0:19:39.08:0,39,398	0/0:12,0:12:30.05:0,30,299	0/0:17,0:17:51.11:0,51,519	0/0:20,0:20:54.09:0,54,542	0/0:32,0:32:90.19:0,90,912	0/0:20,0:20:45.09:0,45,459	1/1:2,21:23:66.19:815,66,0	1/1:3,18:21:54.17:674,54,0	1/1:0,15:15:45.14:565,45,0	1/1:0,25:25:63.20:793,63,0	1/1:3,28:31:29.05:996,29,0	0/0:24,0:23:72.15:0,72,727	1/1:1,15:16:48.15:617,48,0
chr10	80068615	.	T	TGTGTGTGTGTGTGTGTGTGTGCGC	6550.97	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=5.344;DP=511;FS=5.110;HRun=0;HaplotypeScore=294.3683;InbreedingCoeff=0.5065;MQ=58.97;MQ0=3;MQRankSum=-4.733;QD=35.80;ReadPosRankSum=-0.576;VQSLOD=3.0733;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:2.88:0,3,290	0/0:9,0:9:24.08:0,24,979	0/0:12,0:4:5.05:0,5,64	0/0:16,0:10:14.93:0,15,139	0/0:26,0:26:78.23:0,78,3401	0/1:22,0:21:99:262,0,286	0/0:33,0:33:87.26:0,87,3816	0/0:23,0:23:56.81:0,57,1427	0/0:21,0:21:55.14:0,55,2787	0/0:19,0:18:52.99:0,53,2049	0/0:22,0:22:60.18:0,60,2432	1/1:22,0:22:29.92:1275,30,0	1/1:10,0:10:24.06:1119,24,0	1/1:6,7:16:6.18:646,6,0	0/0:23,0:24:72.23:0,72,3872	0/0:13,0:13:29.93:0,30,1817	0/0:28,0:28:76.26:0,76,3537	0/1:21,0:21:99:154,0,1669	0/0:14,0:14:40.72:0,41,1023	0/0:23,0:23:66.23:0,66,2718	0/1:12,0:12:6.53:7,0,583	1/1:9,0:9:5.95:70,6,0	1/1:7,0:15:6.02:221,6,0	1/1:16,0:16:24.08:400,24,0	0/1:24,0:22:99:351,0,246	0/1:13,0:13:99:1456,0,126	0/0:17,0:17:47.92:0,48,1710	1/1:3,0:3:9.03:590,9,0
chr10	80069185	.	A	AT	7168.23	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.003;DP=565;FS=0.000;HRun=0;HaplotypeScore=64.7627;InbreedingCoeff=0.9998;MQ=82.78;MQ0=0;MQRankSum=-0.575;QD=38.13;ReadPosRankSum=4.675;VQSLOD=4.8231;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:54.18:807,54,0	0/0:10,0:10:30.07:0,30,383	0/0:16,0:16:41.23:0,41,549	0/0:16,0:16:34.59:0,35,531	0/0:30,0:30:90.22:0,90,1214	1/1:0,30:30:78.26:1167,78,0	0/0:15,0:15:45.15:0,45,628	0/0:30,0:30:90.27:0,90,1188	0/0:14,0:14:42.12:0,42,554	0/0:23,0:23:69.22:0,69,935	0/0:29,0:29:87.20:0,87,1174	1/1:0,20:20:51.17:763,51,0	1/1:0,17:17:48.16:718,48,0	1/1:0,20:20:45.15:673,45,0	0/0:21,0:21:60.19:0,60,823	0/0:26,0:26:78.22:0,78,1025	0/0:15,0:15:45.09:0,45,587	0/0:12,0:12:36.09:0,36,466	0/0:19,0:19:57.18:0,57,768	0/0:23,0:23:69.21:0,69,930	0/0:11,0:11:33.10:0,33,442	1/1:1,17:19:51.17:750,51,0	1/1:0,20:20:45.15:674,45,0	1/1:0,20:20:57.19:853,57,0	1/1:0,22:22:51.17:762,51,0	0/0:25,0:25:75.22:0,75,1014	0/0:25,0:25:60.78:0,61,941	0/0:17,0:17:51.15:0,51,686
chr10	80069912	.	A	AT	3115.74	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.687;DP=604;FS=7.326;HRun=8;HaplotypeScore=76.5672;InbreedingCoeff=0.9965;MQ=78.32;MQ0=0;MQRankSum=-3.234;QD=25.96;ReadPosRankSum=1.934;VQSLOD=4.4074;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.02:0,48,439	0/0:9,0:9:17.99:0,18,160	0/0:18,0:18:35.78:0,36,305	0/0:11,0:11:29.05:0,29,253	0/0:43,0:44:99:0,110,989	0/0:30,0:30:72.01:0,72,650	0/0:21,0:21:54.02:0,54,494	0/0:37,0:37:96.03:0,96,875	0/0:22,0:22:63:0,63,567	0/0:21,0:21:53.06:0,53,471	0/0:22,0:22:60.03:0,60,549	1/1:1,18:19:57.13:639,57,0	1/1:6,14:20:51.05:546,51,0	1/1:4,10:15:35.89:371,36,0	0/0:19,0:19:57.02:0,57,517	0/0:22,0:22:60.01:0,60,542	0/0:13,0:14:38.03:0,38,329	0/0:25,0:25:65.53:0,66,585	0/0:21,0:21:57.01:0,57,520	0/0:25,0:25:54.01:0,54,494	0/0:22,0:22:63.03:0,63,577	1/1:5,23:28:75.15:829,75,0	1/1:6,13:19:36.11:415,36,0	1/1:5,14:19:48.03:503,48,0	0/0:20,0:20:54.03:0,54,494	0/0:21,0:21:53.96:0,54,485	0/0:33,0:33:93.05:0,93,850	0/0:8,0:8:18.01:0,18,165
chr10	80069956	.	G	GTT	4328.31	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.694;DP=574;FS=0.000;HRun=7;HaplotypeScore=89.7796;InbreedingCoeff=0.9968;MQ=80.57;MQ0=0;MQRankSum=-9.910;QD=36.37;ReadPosRankSum=-0.925;VQSLOD=4.2652;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.24:0,81,943	0/0:10,0:10:30.07:0,30,338	0/0:21,0:21:45.12:0,45,524	0/0:11,0:11:17.36:0,17,177	0/0:35,0:36:99:0,105,1156	0/0:23,0:23:57.16:0,57,664	0/0:17,0:17:42.11:0,42,478	0/0:27,0:27:54.13:0,54,629	0/0:21,0:21:60.17:0,60,698	0/0:23,0:22:63.18:0,63,726	0/0:25,0:25:63.14:0,63,711	1/1:7,17:24:60.10:867,60,0	1/1:6,15:21:63.16:955,63,0	1/1:5,11:17:36.11:568,36,0	0/0:21,0:21:57.17:0,57,663	0/0:22,0:22:63.17:0,63,724	0/0:13,0:13:36.11:0,36,419	0/0:18,0:18:36.08:0,36,418	0/0:27,0:27:69.17:0,69,793	0/0:20,0:20:57.17:0,57,663	0/0:14,0:14:42.12:0,42,489	1/1:13,13:26:54.06:754,54,0	1/1:2,18:21:60.09:898,60,0	1/1:1,9:10:20.99:286,21,0	0/0:23,0:23:57.13:0,57,654	0/0:20,0:20:60.17:0,60,690	0/0:26,0:26:69.15:0,69,789	0/0:10,0:10:27.05:0,27,301
chr10	80070017	.	C	CAA	3952.67	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=2.026;DP=586;FS=1.903;HRun=8;HaplotypeScore=84.5440;InbreedingCoeff=0.9977;MQ=79.71;MQ0=0;MQRankSum=-2.907;QD=37.29;ReadPosRankSum=-0.162;VQSLOD=3.4470;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:48.12:0,48,535	0/0:14,0:14:39.11:0,39,435	0/0:22,0:21:53.13:0,53,556	0/0:15,0:15:23.01:0,23,238	0/0:34,0:34:93.21:0,93,1018	0/0:21,0:21:60.16:0,60,669	0/0:13,0:13:39.11:0,39,435	0/0:31,0:31:78.17:0,78,869	0/0:15,0:16:44.86:0,45,480	0/0:30,0:30:72.17:0,72,793	0/0:28,0:28:72.19:0,72,802	1/1:3,14:17:41.97:555,42,0	1/1:7,18:25:69.15:985,69,0	1/1:6,9:15:33.07:495,33,0	0/0:28,0:28:78.21:0,78,869	0/0:27,0:27:81.22:0,81,903	0/0:20,0:20:48.09:0,48,535	0/0:21,0:21:57.14:0,57,634	0/0:21,0:22:53.85:0,54,572	0/0:27,0:27:72.19:0,72,802	0/0:18,0:18:42.08:0,42,468	1/1:3,20:24:69.15:1019,69,0	1/1:3,15:18:45.02:613,45,0	1/1:1,6:7:18.06:285,18,0	0/0:24,0:24:69.17:0,69,758	0/0:11,0:11:33.09:0,33,368	0/0:25,0:24:72.16:0,72,784	0/0:12,0:12:36.10:0,36,401
chr10	80070093	.	AAG	A	4424.96	PASS	AB=0.545;AC=11;AF=0.196;AN=56;BaseQRankSum=14.656;DP=610;FS=2.945;HRun=0;HaplotypeScore=81.2744;InbreedingCoeff=0.8866;MQ=79.70;MQ0=0;MQRankSum=-3.373;QD=40.60;ReadPosRankSum=1.892;VQSLOD=6.9451;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.24:0,69,1311	0/0:11,0:11:33.11:0,33,637	0/0:19,0:19:57.20:0,57,1083	0/0:16,0:16:45.63:0,46,839	0/0:31,0:31:90.29:0,90,1691	0/0:27,0:27:81.28:0,81,1564	0/0:14,0:14:42.14:0,42,811	0/0:37,0:37:99:0,105,1935	0/0:24,0:24:69.24:0,69,1321	0/0:33,0:33:99:0,99,1891	0/0:29,0:29:87.30:0,87,1669	1/1:0,14:14:39.13:596,39,0	1/1:0,24:24:66.22:1004,66,0	1/1:3,17:20:54.18:825,54,0	0/0:20,0:20:60.21:0,60,1151	0/0:23,0:23:63.22:0,63,1208	0/0:20,0:20:60.21:0,60,1140	0/0:17,0:17:48.16:0,48,897	0/0:26,0:26:78.27:0,78,1502	0/0:35,0:35:99:0,102,1963	0/0:21,0:21:60.21:0,60,1159	1/1:1,19:20:54.18:827,54,0	1/1:0,19:19:54.18:814,54,0	0/1:2,10:12:27.95:359,0,28	0/0:17,0:17:51.17:0,51,975	0/0:18,0:18:54.19:0,54,1044	0/0:32,0:32:93.32:0,93,1797	0/0:8,0:8:24.08:0,24,464
chr10	80070397	.	A	AT	4079.65	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=2.842;DP=604;FS=0.000;HRun=5;HaplotypeScore=61.6933;InbreedingCoeff=0.9964;MQ=86.48;MQ0=0;MQRankSum=-2.578;QD=32.12;ReadPosRankSum=1.307;VQSLOD=4.1933;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.12:0,48,516	0/0:13,0:13:39.08:0,39,411	0/0:18,0:18:45.09:0,45,470	0/0:21,0:21:43.90:0,44,428	0/0:28,0:28:81.20:0,81,870	0/0:35,0:35:99:0,99,1045	0/0:22,0:22:60.13:0,60,636	0/0:19,0:19:48.11:0,48,510	0/0:30,0:30:84.19:0,84,894	0/0:23,0:23:69.16:0,69,735	0/0:18,0:18:48.12:0,48,516	1/1:1,20:21:54.18:710,54,0	1/1:5,29:34:75.24:987,75,0	1/1:1,24:25:69.22:904,69,0	0/0:32,0:31:84.21:0,84,903	0/0:24,0:24:63.15:0,63,677	0/0:28,0:28:84.17:0,84,884	0/0:10,0:10:27.07:0,27,290	0/0:21,0:21:51.10:0,51,528	0/0:21,0:21:63.14:0,63,669	0/0:25,0:25:75.19:0,75,806	1/1:1,11:12:30.10:393,30,0	1/1:0,19:19:45.05:573,45,0	1/1:2,14:16:39.13:513,39,0	0/0:20,0:20:51.12:0,51,548	0/0:19,0:19:54.13:0,54,580	0/0:28,0:28:75.19:0,75,806	0/0:6,0:6:15.04:0,15,161
chr10	80070906	.	G	GA	6559.97	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-14.016;DP=698;FS=4.593;HRun=1;HaplotypeScore=62.6116;InbreedingCoeff=0.9997;MQ=86.97;MQ0=0;MQRankSum=-0.876;QD=42.88;ReadPosRankSum=2.677;VQSLOD=5.1838;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.20:0,60,779	0/0:10,0:10:27.09:0,27,350	0/0:25,0:25:63.19:0,63,789	0/0:23,0:23:60.14:0,60,745	0/0:22,0:22:63.20:0,63,817	0/0:20,0:20:60.18:0,60,763	0/0:11,0:11:33.11:0,33,428	0/0:46,0:45:99:0,123,1557	0/0:21,0:21:63.18:0,63,802	0/0:29,0:29:84.23:0,84,1071	0/0:21,0:21:57.17:0,57,726	1/1:0,30:30:90.30:1349,90,0	1/1:1,29:30:84.28:1259,84,0	1/1:1,24:25:72.24:1079,72,0	0/0:40,0:40:99:0,120,1558	0/0:33,0:33:96.31:0,96,1247	0/0:21,0:21:60.19:0,60,779	0/0:14,0:14:39.13:0,39,506	0/0:29,0:29:84.27:0,84,1090	0/0:37,0:37:99:0,108,1356	0/0:19,0:19:57.19:0,57,740	1/1:1,23:24:66.22:989,66,0	1/1:0,23:23:69.23:1034,69,0	1/1:2,19:21:57.19:851,57,0	0/0:35,0:35:99:0,105,1363	0/0:16,0:16:42.14:0,42,546	0/0:30,0:30:90.29:0,90,1167	0/0:22,0:22:66.21:0,66,854
chr10	80072316	.	TTTC	T	420.52	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.817;DP=690;FS=16.969;HRun=0;HaplotypeScore=108.3978;InbreedingCoeff=0.9973;MQ=76.21;MQ0=0;MQRankSum=-5.400;QD=15.02;ReadPosRankSum=1.707;VQSLOD=2.2281;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,15:28:48:515,48,0	0/0:14,0:14:42.13:0,42,915	0/0:11,0:11:24.05:0,24,429	0/0:17,0:17:41.15:0,41,875	0/0:41,0:41:99:0,117,2649	0/0:20,0:20:57.17:0,57,1256	0/0:25,0:25:69.21:0,69,1489	0/0:30,0:30:81.23:0,81,1681	0/0:22,0:22:66.23:0,66,1519	0/0:24,0:24:72.24:0,72,1635	0/0:22,0:22:66.23:0,66,1554	0/0:20,0:20:60.19:0,60,1357	0/0:30,0:30:87.26:0,87,1886	0/0:19,0:19:57.17:0,57,1254	0/0:32,0:32:96.31:0,96,2125	0/0:25,0:25:75.24:0,75,1654	0/0:23,0:23:66.23:0,66,1560	0/0:13,0:13:39.09:0,39,869	0/0:33,0:33:93.30:0,93,2058	0/0:28,0:28:84.26:0,84,1829	0/0:32,0:32:90.76:0,91,1994	0/0:28,0:28:84.28:0,84,1941	0/0:22,0:22:63.20:0,63,1389	0/0:34,0:34:99:0,102,2363	0/0:30,0:30:90.27:0,90,1971	0/0:34,0:34:90.29:0,90,2016	0/0:23,0:23:69.22:0,69,1568	0/0:10,0:10:30.10:0,30,708
chr10	80072321	.	GCTGCCACCAAAGCTTTAATTT	G	2298.01	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.424;DP=677;FS=19.340;HRun=0;HaplotypeScore=359.5376;InbreedingCoeff=0.9989;MQ=77.91;MQ0=0;MQRankSum=-7.053;QD=135.18;ReadPosRankSum=1.594;VQSLOD=2.6837;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:17:51.18:2393,51,0	0/0:14,0:14:39.11:0,39,3338	0/0:11,0:11:30.10:0,30,1745	0/0:18,0:19:50.77:0,51,3407	0/0:44,0:44:99:0,129,10844	0/0:17,0:17:51.18:0,51,4562	0/0:23,0:23:69.22:0,69,5318	0/0:30,0:30:84.27:0,84,5850	0/0:22,0:22:66.20:0,66,5421	0/0:28,0:28:84.29:0,84,7556	0/0:24,0:24:72.25:0,72,5882	0/0:21,0:21:63.22:0,63,5561	0/0:26,0:26:78.25:0,78,6825	0/0:21,0:21:60.21:0,60,4913	0/0:31,0:31:93.32:0,93,8104	0/0:24,0:24:72.24:0,72,6351	0/0:24,0:24:72.25:0,72,6606	0/0:14,0:14:42.14:0,42,3552	0/0:31,0:31:86.97:0,87,6339	0/0:28,0:28:81.28:0,81,7344	0/0:30,0:30:83.34:0,83,6406	0/0:29,0:29:84.29:0,84,7842	0/0:22,0:22:66.23:0,66,5889	0/0:34,0:34:99:0,102,9038	0/0:30,0:30:84.29:0,84,7196	0/0:30,0:30:87.30:0,87,6986	0/0:23,0:23:69.24:0,69,6289	0/0:10,0:10:30.10:0,30,2288
chr10	80072342	.	T	TG	125.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.664;DP=655;FS=19.547;HRun=0;HaplotypeScore=78.8314;InbreedingCoeff=0.9049;MQ=85.69;MQ0=0;MQRankSum=-6.799;QD=3.93;ReadPosRankSum=1.778;VQSLOD=1.8046;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,16:32:42.88:221,43,0	0/0:11,0:11:33.11:0,33,461	0/0:16,0:16:44.68:0,45,536	0/0:26,0:26:66.13:0,66,839	0/0:37,0:37:99:0,102,1403	0/0:16,0:16:48.14:0,48,653	0/0:18,0:18:54.18:0,54,755	0/0:28,0:28:84.27:0,84,1144	0/0:21,0:21:63.21:0,63,879	0/0:29,0:29:84.25:0,84,1137	0/0:25,0:25:75.23:0,75,1017	0/0:21,0:21:63.21:0,63,880	0/0:23,0:23:69.21:0,69,931	0/0:21,0:21:60.19:0,60,823	0/0:31,0:31:93.30:0,93,1276	0/0:24,0:24:72.24:0,72,1006	0/0:29,0:29:87.27:0,87,1194	0/0:12,0:12:33.11:0,33,459	0/0:21,0:21:60.18:0,60,803	0/0:34,0:34:99:0,99,1329	0/0:20,0:20:57.19:0,57,797	0/0:25,0:25:75.25:0,75,1048	0/0:26,0:26:78.24:0,78,1057	0/0:36,0:36:99:0,108,1455	0/0:22,0:22:63.19:0,63,859	0/0:24,0:23:69.23:0,69,962	0/0:25,0:25:75.21:0,75,993	0/0:2,0:2:6.02:0,6,84
chr10	80072473	.	G	GA	5854.75	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-11.395;DP=667;FS=3.924;HRun=7;HaplotypeScore=66.6124;InbreedingCoeff=0.9890;MQ=86.01;MQ0=0;MQRankSum=-2.479;QD=31.99;ReadPosRankSum=1.396;VQSLOD=4.8128;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,43:43:99:1434,120,0	0/0:10,0:10:24.02:0,24,226	0/0:24,0:24:51.06:0,51,485	0/0:24,0:22:48.06:0,48,457	0/0:20,0:20:51.07:0,51,492	0/0:22,0:22:66.09:0,66,631	0/0:14,0:14:39.06:0,39,377	0/0:36,0:36:87.11:0,87,836	0/0:16,0:16:48.08:0,48,463	0/0:20,0:20:51.08:0,51,493	0/0:22,0:22:51.07:0,51,487	1/1:0,22:22:63.19:761,63,0	1/1:4,15:19:42.13:507,42,0	1/1:0,28:28:78.24:942,78,0	0/0:43,0:43:99:0,117,1130	0/0:26,0:26:66.09:0,66,632	0/0:32,0:32:72.08:0,72,685	0/0:15,0:15:36.05:0,36,348	0/0:20,0:20:57.09:0,57,551	0/0:31,0:31:87.12:0,87,835	0/0:37,0:37:99:0,102,985	1/1:3,24:27:66.20:797,66,0	1/1:3,23:26:66.20:798,66,0	1/1:1,17:18:51.16:616,51,0	0/0:15,0:15:39.06:0,39,377	0/0:30,0:30:87.11:0,87,830	0/0:22,0:22:66.09:0,66,631	0/0:5,0:5:9.01:0,9,87
chr10	80072595	.	C	CCTT	2690.67	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=6.020;DP=759;FS=0.557;HRun=0;HaplotypeScore=147.3443;InbreedingCoeff=0.9707;MQ=88.58;MQ0=0;MQRankSum=-2.930;QD=50.77;ReadPosRankSum=0.670;VQSLOD=4.9121;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:66:99:0,172,2711	0/0:6,0:6:9.03:0,9,143	0/0:23,0:23:60.19:0,60,910	0/0:34,0:34:69.80:0,70,1010	0/0:31,0:31:84.27:0,84,1309	1/1:5,21:26:72.12:1394,72,0	0/0:29,0:29:84.28:0,84,1306	0/0:41,0:41:99:0,105,1644	0/0:26,0:26:75.26:0,75,1189	0/0:25,0:25:69.23:0,69,1074	0/0:21,0:21:57.19:0,57,904	0/0:26,0:26:75.26:0,75,1189	0/0:24,0:24:66.21:0,66,1025	0/0:37,0:37:99:0,102,1589	0/0:42,0:42:99:0,111,1735	0/0:27,0:26:75.21:0,75,1141	0/0:28,0:28:78.27:0,78,1237	0/0:17,0:16:48.16:0,48,758	0/0:17,0:17:45.15:0,45,714	0/0:19,0:19:54.09:0,54,779	0/0:45,0:45:99:0,120,1832	0/0:28,0:28:81.20:0,81,1209	0/0:17,0:17:42.14:0,42,665	0/0:25,0:25:66.21:0,66,1024	1/1:3,23:27:69.19:1418,69,0	0/0:25,0:25:75.26:0,75,1189	0/0:27,0:27:78.25:0,78,1213	./.
chr10	80075351	.	GCACA	G	19803.55	PASS	AB=0.612;AC=43;AF=0.768;AN=56;BaseQRankSum=6.321;DP=810;FS=1.280;HRun=0;HaplotypeScore=160.7747;InbreedingCoeff=0.6955;MQ=61.07;MQ0=7;MQRankSum=1.261;QD=31.58;ReadPosRankSum=6.403;VQSLOD=4.4856;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,1:44:63.47:0,63,2403	1/1:0,11:11:24.07:405,24,0	0/0:40,0:16:7.48:0,7,175	0/0:35,0:16:24.54:0,25,430	1/1:4,26:31:54.18:911,54,0	1/1:2,20:22:45.15:759,45,0	0/0:24,0:25:57.19:0,57,1318	1/1:16,17:33:51.03:721,51,0	1/1:5,25:30:53.99:1097,54,0	1/1:2,30:34:90.29:1472,90,0	1/1:2,21:23:42.12:709,42,0	1/1:4,23:27:54.18:910,54,0	1/1:9,21:31:54.18:889,54,0	1/1:10,22:33:45.15:737,45,0	1/1:4,34:38:90.31:1518,90,0	1/1:5,31:36:66.22:1114,66,0	0/0:38,0:38:93.28:0,93,2108	0/1:4,8:12:62.18:365,0,62	0/1:9,12:20:7.33:513,0,7	1/1:4,28:34:45.10:683,45,0	1/1:10,31:42:80.86:1344,81,0	1/1:5,22:27:54.18:911,54,0	1/1:4,30:34:75.26:1265,75,0	1/1:7,20:27:38.42:657,38,0	1/1:5,21:26:40.22:942,40,0	1/1:7,20:27:60.20:1001,60,0	1/1:7,17:25:51.17:838,51,0	0/1:1,2:3:17.62:45,0,18
chr10	80077977	.	T	TGTGTGAGA	6004	PASS	AB=1.000;AC=29;AF=0.537;AN=54;BaseQRankSum=-4.217;DP=518;FS=29.778;HRun=0;HaplotypeScore=192.6296;InbreedingCoeff=-0.1953;MQ=46.64;MQ0=14;MQRankSum=-0.353;QD=13.65;ReadPosRankSum=-0.361;VQSLOD=2.3500;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:34.26:34,0,223	0/1:5,0:5:45.21:45,0,45	0/0:8,0:5:6.24:0,6,103	0/0:6,0:1:2.88:0,3,15	0/1:12,0:15:75.23:75,0,83	0/1:22,0:20:78.36:78,0,116	0/0:12,0:26:36.03:0,36,532	1/1:29,0:24:26.83:409,27,0	0/1:17,0:18:99:166,0,151	0/1:27,0:27:62.45:626,0,62	0/1:17,0:19:99:146,0,106	1/1:4,8:16:6.21:227,6,0	1/1:23,0:22:53.84:784,54,0	1/1:4,0:21:7.99:62,8,0	0/1:37,0:38:99:634,0,179	0/1:20,0:24:99:184,0,190	0/0:26,0:26:15.38:0,15,876	0/1:7,0:8:56.80:57,0,82	0/1:10,0:10:18.14:237,0,18	0/1:24,0:24:68.84:303,0,69	0/1:18,0:18:33.55:289,0,34	1/1:9,4:22:15.32:257,15,0	1/1:15,2:23:27.55:490,28,0	1/1:23,0:23:32.82:561,33,0	0/0:10,0:10:8.95:0,9,120	0/1:13,0:12:99:170,0,116	0/1:13,0:15:99:169,0,165	./.
chr10	80078430	.	GAAAACA	G	1921.11	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.758;DP=633;FS=10.980;HRun=0;HaplotypeScore=129.3034;InbreedingCoeff=0.9897;MQ=83.20;MQ0=0;MQRankSum=-7.087;QD=64.04;ReadPosRankSum=-0.224;VQSLOD=3.3013;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.25:0,72,2581	0/0:12,0:12:36.12:0,36,1265	0/0:23,0:23:69.24:0,69,2278	0/0:20,0:20:60.19:0,60,1902	0/0:25,0:25:75.26:0,75,2747	0/0:35,0:35:99:0,105,3622	0/0:25,0:25:75.26:0,75,2656	0/0:27,0:27:75.26:0,75,2621	0/0:22,0:22:66.23:0,66,2310	0/0:26,0:26:78.27:0,78,2813	0/0:24,0:24:72.25:0,72,2641	0/0:22,0:22:63.22:0,63,2250	0/0:36,0:36:99:0,105,3752	0/0:15,0:15:45.15:0,45,1614	0/0:34,0:34:96.33:0,96,3464	0/0:17,0:17:51.18:0,51,1812	0/0:29,0:29:87.28:0,87,3081	0/0:5,0:5:15.05:0,15,549	0/0:19,0:19:57.20:0,57,2031	0/0:31,0:31:90.31:0,90,3230	0/0:14,0:14:42.14:0,42,1482	0/0:18,0:18:54.18:0,54,1880	0/0:18,0:18:51.18:0,51,1803	0/0:17,0:17:51.13:0,51,1762	0/0:26,0:26:75.26:0,75,2749	1/1:2,21:23:63.22:1525,63,0	0/0:39,0:39:99:0,114,4116	1/1:0,7:7:21.07:517,21,0
chr10	80079128	.	AT	A	10490.09	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=7.813;DP=535;FS=0.500;HRun=9;HaplotypeScore=52.6829;InbreedingCoeff=0.9733;MQ=75.60;MQ0=0;MQRankSum=-0.421;QD=23.21;ReadPosRankSum=1.239;VQSLOD=5.5632;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:63.19:0,63,727	1/1:1,4:5:12.01:110,12,0	0/0:16,0:15:24.04:0,24,259	0/0:6,0:6:12.01:0,12,119	1/1:3,18:21:50.95:457,51,0	1/1:2,18:20:54.03:494,54,0	0/0:13,0:13:27.07:0,27,302	1/1:7,34:41:83.19:901,83,0	1/1:1,15:16:42.02:384,42,0	1/1:3,26:30:80.96:725,81,0	1/1:0,21:21:53.94:483,54,0	1/1:0,20:20:60.03:549,60,0	1/1:2,16:18:39.01:357,39,0	1/1:1,10:11:30.02:275,30,0	1/1:0,25:25:69.04:632,69,0	1/1:2,25:27:69.03:632,69,0	0/0:22,0:22:57.12:0,57,633	1/1:3,7:10:18:165,18,0	1/1:3,11:13:33:296,33,0	1/1:2,26:28:75.03:686,75,0	1/1:2,10:12:27.01:247,27,0	1/1:1,7:8:15:137,15,0	1/1:3,18:21:51.03:467,51,0	1/1:0,9:9:15.01:137,15,0	1/1:4,25:29:72.03:659,72,0	1/1:2,24:26:72.01:653,72,0	1/1:1,32:33:96.05:879,96,0	1/1:0,7:7:18.01:165,18,0
chr10	80080868	.	GA	G	4081.14	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.821;DP=640;FS=5.835;HRun=5;HaplotypeScore=62.3773;InbreedingCoeff=0.9965;MQ=79.63;MQ0=0;MQRankSum=-1.889;QD=30.01;ReadPosRankSum=3.083;VQSLOD=4.4201;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.29:0,93,1253	0/0:7,0:7:15.05:0,15,205	0/0:17,0:17:44.47:0,44,512	0/0:21,0:21:54.13:0,54,674	0/0:33,0:33:93.30:0,93,1255	0/0:20,0:20:60.20:0,60,820	0/0:23,0:23:66.21:0,66,888	0/0:25,0:25:63.19:0,63,833	0/0:20,0:20:60.20:0,60,821	0/0:40,0:40:99:0,111,1504	0/0:24,0:24:69.22:0,69,923	1/1:2,23:25:63.18:715,63,0	1/1:0,21:21:63.18:715,63,0	1/1:2,28:30:75.21:851,75,0	0/0:31,0:31:90.29:0,90,1215	0/0:22,0:22:54.18:0,54,739	0/0:27,0:27:81.23:0,81,1086	0/0:12,0:12:36.03:0,36,450	0/0:14,0:14:36.11:0,36,477	0/0:32,0:32:90.29:0,90,1217	0/0:22,0:22:66.22:0,66,895	1/1:0,14:14:42.12:476,42,0	1/1:2,22:24:57.16:647,57,0	1/1:2,20:22:60.17:678,60,0	0/0:20,0:20:51.13:0,51,664	0/0:20,0:20:60.19:0,60,807	0/0:30,0:30:87.27:0,87,1172	0/0:10,0:10:27.09:0,27,369
chr10	80081258	.	C	CA	1277.22	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.749;DP=639;FS=0.628;HRun=5;HaplotypeScore=65.7786;InbreedingCoeff=0.9932;MQ=88.65;MQ0=0;MQRankSum=-0.914;QD=34.52;ReadPosRankSum=0.086;VQSLOD=3.8505;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:56.80:0,57,726	0/0:8,0:8:24.06:0,24,258	0/0:26,0:26:55.30:0,55,522	0/0:21,0:21:37.25:0,37,408	0/0:31,0:31:87.18:0,87,917	0/0:31,0:31:90.21:0,90,959	0/0:17,0:17:51.13:0,51,548	0/0:45,0:45:99:0,108,1141	0/0:23,0:23:66.16:0,66,709	0/0:29,0:29:84.21:0,84,902	0/0:22,0:22:66.17:0,66,709	0/0:18,0:18:51.13:0,51,548	0/0:30,0:30:81.20:0,81,870	0/0:16,0:16:45.10:0,45,475	0/0:11,0:11:30.08:0,30,322	0/0:17,0:17:51.13:0,51,548	0/0:22,0:22:57.14:0,57,613	0/0:8,0:8:18.04:0,18,193	0/0:15,0:15:45.09:0,45,468	0/0:39,0:39:99:0,102,1093	0/0:31,0:31:87.18:0,87,917	0/0:13,0:13:30.03:0,30,298	0/0:28,0:28:69.15:0,69,731	0/0:20,0:20:48.08:0,48,503	0/0:27,0:27:78.16:0,78,821	1/1:1,27:28:84.25:1089,84,0	0/0:28,0:28:78.20:0,78,838	1/1:1,8:9:24.08:310,24,0
chr10	80081371	.	GA	G	2676.05	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.065;DP=588;FS=8.316;HRun=8;HaplotypeScore=59.5816;InbreedingCoeff=0.9649;MQ=91.27;MQ0=0;MQRankSum=-2.830;QD=24.11;ReadPosRankSum=2.743;VQSLOD=4.3967;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:51.62:0,52,605	0/0:13,0:13:36.11:0,36,435	0/0:27,0:27:69.08:0,69,762	0/0:21,0:21:33.62:0,34,391	0/0:33,0:33:84.25:0,84,1003	0/0:40,0:41:99:0,114,1320	0/0:9,0:9:27.08:0,27,326	0/0:30,0:30:75.22:0,75,894	0/0:14,0:14:39.09:0,39,446	0/0:30,0:30:83.92:0,84,979	0/0:28,0:28:72.22:0,72,870	1/1:1,13:14:39.06:377,39,0	1/1:3,21:24:59.94:579,60,0	1/1:1,23:24:66.10:634,66,0	0/0:16,0:16:42.12:0,42,496	0/0:19,0:19:54.17:0,54,652	0/0:13,0:13:33.10:0,33,398	0/0:1,0:1:3.01:0,3,36	0/0:18,0:18:45.10:0,45,519	0/0:38,0:38:99:0,99,1184	0/0:18,0:18:51.16:0,51,616	1/1:0,18:18:51.08:492,51,0	1/1:0,19:19:47.97:463,48,0	1/1:1,11:12:33.05:319,33,0	0/0:23,0:23:57.17:0,57,679	0/0:20,0:20:54.11:0,54,632	0/0:29,0:29:84.26:0,84,1015	0/0:15,0:15:45.12:0,45,530
chr10	80081492	.	ATTC	A	997.81	PASS	AB=0.526;AC=3;AF=0.054;AN=56;BaseQRankSum=3.320;DP=562;FS=5.261;HRun=0;HaplotypeScore=95.9683;InbreedingCoeff=0.6657;MQ=88.30;MQ0=0;MQRankSum=-3.782;QD=36.96;ReadPosRankSum=1.515;VQSLOD=4.5753;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:30.10:0,30,662	0/0:12,0:12:36.12:0,36,794	0/0:25,0:25:72.21:0,72,1442	0/0:16,0:16:45.15:0,45,878	0/0:25,0:25:66.23:0,66,1457	0/0:27,0:27:75.24:0,75,1596	0/0:23,0:23:60.21:0,60,1325	0/0:35,0:35:87.30:0,87,1884	0/0:22,0:22:66.23:0,66,1436	0/0:20,0:20:54.19:0,54,1172	0/0:16,0:16:48.16:0,48,1059	0/0:15,0:15:45.14:0,45,951	0/0:27,0:27:78.27:0,78,1683	0/0:19,0:19:51.18:0,51,1107	0/0:32,0:32:84.29:0,84,1822	0/0:21,0:21:60.21:0,60,1308	0/0:12,0:11:27.09:0,27,573	0/0:7,0:7:18.06:0,18,397	0/0:20,0:20:51.18:0,51,1126	0/0:25,0:25:66.20:0,66,1398	0/0:33,0:33:93.32:0,93,2013	0/0:11,0:11:27.09:0,27,596	0/0:19,0:19:54.19:0,54,1178	0/0:11,0:11:33.11:0,33,729	0/0:18,0:18:54.16:0,54,1131	0/1:2,18:20:12.08:765,0,12	0/0:33,0:33:90.31:0,90,1958	1/1:0,7:7:21.07:337,21,0
chr10	80084303	.	GGTGTGT	G	752.37	PASS	AB=0.895;AC=21;AF=0.404;AN=52;BaseQRankSum=5.264;DP=497;FS=7.025;HRun=0;HaplotypeScore=99.4418;InbreedingCoeff=0.5705;MQ=60.33;MQ0=20;MQRankSum=-2.462;QD=4.73;ReadPosRankSum=0.124;VQSLOD=1.1619;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:18:18.06:0,18,472	1/1:3,0:5:0.89:2,1,0	0/0:41,0:21:0.89:0,1,2	0/0:36,0:15:4.26:0,4,45	0/0:15,0:15:2.19:0,2,41	0/1:15,0:17:4.18:4,0,156	0/0:21,0:21:18.04:0,18,439	0/0:21,0:21:3.01:0,3,75	1/1:5,0:7:0.88:2,1,0	1/1:20,5:26:9.88:127,10,0	0/0:15,0:19:1.90:0,2,12	1/1:8,6:15:12.04:223,12,0	1/1:11,0:13:2.57:41,3,0	./.	0/0:13,0:15:24.08:0,24,686	0/0:16,0:16:24.07:0,24,501	0/0:25,0:27:23.92:0,24,689	0/0:13,0:14:2.12:0,2,20	./.	0/0:13,0:16:5.19:0,5,79	0/0:15,0:18:15.05:0,15,200	1/1:12,7:19:12.02:206,12,0	1/1:13,2:15:6.02:100,6,0	1/1:16,0:18:5.98:62,6,0	0/0:19,1:25:12.04:0,12,179	1/1:15,0:19:6.02:84,6,0	0/0:15,0:18:17.04:0,17,205	1/1:3,1:4:3.01:60,3,0
chr10	80084704	.	TTG	T	7079.83	PASS	AB=0.798;AC=45;AF=0.804;AN=56;BaseQRankSum=5.757;DP=493;FS=21.385;HRun=0;HaplotypeScore=117.7132;InbreedingCoeff=0.6551;MQ=54.98;MQ0=6;MQRankSum=3.145;QD=16.66;ReadPosRankSum=3.565;VQSLOD=3.4604;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:30.04:0,30,381	1/1:4,3:7:12.04:143,12,0	0/1:28,0:17:0.74:1,0,156	0/0:23,0:11:24.02:0,24,294	1/1:10,13:23:53.77:610,54,0	1/1:10,5:14:23.97:244,24,0	0/0:11,0:11:24.05:0,24,339	1/1:17,6:23:21.93:336,22,0	1/1:8,5:13:24.05:274,24,0	1/1:17,13:29:57.10:635,57,0	1/1:6,8:14:36.08:411,36,0	1/1:15,0:17:4.56:92,5,0	1/1:21,0:21:23.86:123,24,0	1/1:18,0:21:18:140,18,0	1/1:8,14:21:57.09:631,57,0	1/1:7,12:19:48.10:544,48,0	0/0:17,0:17:27.09:0,27,433	0/1:8,8:15:10.37:279,0,10	1/1:5,7:12:24.05:274,24,0	1/1:7,14:21:42.13:501,42,0	1/1:1,3:4:6.02:73,6,0	0/1:10,0:15:11.86:94,0,12	1/1:11,0:14:3.78:50,4,0	1/1:14,0:16:19.53:92,20,0	1/1:7,6:12:30.04:331,30,0	1/1:22,4:26:50.95:503,51,0	1/1:11,12:21:50.97:538,51,0	1/1:10,1:11:17.94:163,18,0
chr10	80084732	.	G	GAA	4746.07	PASS	AB=0.990;AC=37;AF=0.661;AN=56;BaseQRankSum=7.778;DP=534;FS=8.653;HRun=1;HaplotypeScore=134.8027;InbreedingCoeff=0.1964;MQ=46.20;MQ0=41;MQRankSum=-2.093;QD=10.89;ReadPosRankSum=4.252;VQSLOD=1.4952;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:14:12.45:0,12,318	1/1:4,0:4:1.10:114,1,0	0/1:53,0:6:3.79:4,0,76	0/0:51,0:13:20.15:0,20,293	1/1:21,1:22:18.10:415,18,0	1/1:13,1:13:26.47:249,26,0	0/0:10,0:10:30.10:0,30,449	0/1:24,0:24:67.49:67,0,77	0/1:12,0:12:2.96:199,0,3	1/1:25,0:24:22.29:345,22,0	1/1:14,1:15:27.37:403,27,0	0/1:22,0:21:4.69:73,0,5	1/1:19,0:19:21.47:213,21,0	0/1:17,0:17:12.13:64,0,12	1/1:22,0:21:39:532,39,0	1/1:21,0:21:16.87:412,17,0	0/0:21,0:20:53.58:0,54,704	0/1:14,2:15:8.72:135,0,9	0/1:15,0:14:14.58:161,0,15	1/1:19,0:19:24.32:342,24,0	0/1:8,0:7:43.44:53,0,43	1/1:16,0:15:4.71:76,5,0	1/1:13,0:13:20.06:88,20,0	0/1:15,0:15:30.38:30,0,33	1/1:17,0:16:22.75:293,23,0	0/1:17,0:17:7.94:48,0,8	1/1:22,0:20:25.57:428,26,0	0/1:8,0:7:2.46:2,0,6
chr10	80084736	.	A	AAGAG	9436.09	PASS	AB=0.982;AC=41;AF=0.732;AN=56;BaseQRankSum=4.925;DP=546;FS=0.000;HRun=0;HaplotypeScore=135.0459;InbreedingCoeff=0.6668;MQ=45.08;MQ0=41;MQRankSum=-2.491;QD=24.20;ReadPosRankSum=1.707;VQSLOD=4.2402;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:14:26.96:0,27,314	1/1:5,0:5:9.03:139,9,0	0/0:52,0:6:9.17:0,9,96	0/0:47,0:10:13.23:0,13,159	1/1:22,0:22:39.05:576,39,0	1/1:14,0:13:27.09:410,27,0	0/0:11,0:11:30.06:0,30,394	1/1:22,0:23:28.69:520,29,0	1/1:12,0:12:4.69:269,5,0	1/1:25,0:24:51.16:777,51,0	1/1:17,0:17:33.11:497,33,0	1/1:23,0:22:50.60:598,51,0	1/1:18,2:20:48.16:720,48,0	1/1:19,0:19:35.94:458,36,0	1/1:23,0:21:45.14:679,45,0	1/1:20,1:21:41.97:597,42,0	0/0:22,0:21:42.14:0,42,619	0/1:18,0:16:3.74:215,0,4	1/1:17,0:16:17.48:427,17,0	1/1:20,0:19:27.09:418,27,0	0/1:9,0:8:43.95:80,0,44	1/1:15,0:14:35.71:335,36,0	1/1:14,0:14:26.98:354,27,0	1/1:15,0:15:17.84:216,18,0	1/1:17,0:16:30.08:409,30,0	0/1:17,1:18:14.05:140,0,14	1/1:23,0:20:39.13:601,39,0	0/0:8,0:7:2.24:0,2,6
chr10	80084746	.	GA	G	2082.36	PASS	AB=0.972;AC=31;AF=0.554;AN=56;BaseQRankSum=5.450;DP=554;FS=1.528;HRun=2;HaplotypeScore=130.5937;InbreedingCoeff=0.0281;MQ=42.73;MQ0=48;MQRankSum=-0.612;QD=5.31;ReadPosRankSum=2.321;VQSLOD=0.8368;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:15:27.97:0,28,438	1/1:7,0:7:11.68:94,12,0	0/0:50,0:5:9.39:0,9,94	0/0:39,0:7:9.25:0,9,127	1/1:18,0:18:21.39:180,21,0	0/1:15,0:14:55.40:55,0,74	0/0:14,0:13:31.34:0,31,384	1/1:27,0:26:24.29:90,24,0	0/1:16,0:16:72.52:73,0,96	0/1:24,0:21:99:127,0,126	0/1:19,0:19:84.31:131,0,84	0/1:22,2:23:13.46:106,0,13	0/0:22,0:21:25.94:0,26,218	0/1:18,2:18:6.87:32,0,7	1/1:21,0:19:40.29:226,40,0	0/1:20,0:20:99:153,0,111	0/0:20,0:19:48.15:0,48,643	0/1:19,0:17:26.23:26,0,96	0/1:19,0:18:23.39:73,0,23	1/1:19,0:16:15.55:103,16,0	0/1:10,0:9:8.19:8,0,120	0/1:15,0:13:11.26:25,0,11	1/1:14,2:16:4.99:25,5,0	1/1:13,1:14:3.45:19,3,0	1/1:17,0:16:20.82:145,21,0	0/1:15,5:19:99:315,0,103	1/1:23,0:20:14.09:170,14,0	0/1:9,0:8:31.99:91,0,32
chr10	80084747	.	A	AG	8474.07	PASS	AB=0.711;AC=34;AF=0.607;AN=56;BaseQRankSum=4.067;DP=543;FS=0.908;HRun=1;HaplotypeScore=105.6153;InbreedingCoeff=0.1197;MQ=43.21;MQ0=49;MQRankSum=-0.667;QD=21.03;ReadPosRankSum=4.002;VQSLOD=5.1531;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:15:34.35:0,34,451	1/1:2,6:8:12.04:170,12,0	0/0:50,0:5:9.87:0,10,109	0/0:39,0:7:14.40:0,14,166	1/1:3,15:18:16.36:491,16,0	0/1:5,10:14:12.87:282,0,13	0/0:14,0:13:32.60:0,33,427	0/1:14,13:25:7.45:459,0,7	0/1:8,9:17:97.74:285,0,98	0/1:7,14:20:78.99:615,0,79	0/1:9,9:18:58.16:429,0,58	1/1:13,11:23:57.04:726,57,0	0/1:19,3:22:70.17:375,0,70	1/1:12,8:18:33.01:392,33,0	1/1:2,19:19:45.10:659,45,0	0/1:6,11:18:37.50:426,0,37	0/0:20,0:19:48.16:0,48,663	0/1:6,8:12:99:188,0,107	0/1:6,11:16:13.72:470,0,14	1/1:4,12:13:25.16:411,25,0	0/1:5,6:9:80.78:81,0,111	1/1:2,13:13:35.99:415,36,0	1/1:7,8:15:27.05:355,27,0	1/1:9,4:13:14.17:250,14,0	1/1:1,15:15:24.82:369,25,0	0/1:20,0:19:8.56:9,0,143	1/1:3,22:22:41.39:608,41,0	0/1:9,0:8:8.16:8,0,55
chr10	80084749	.	GA	G	385.75	PASS	AB=0.987;AC=18;AF=0.321;AN=56;BaseQRankSum=6.293;DP=567;FS=1.348;HRun=2;HaplotypeScore=135.8793;InbreedingCoeff=-0.0602;MQ=43.28;MQ0=50;MQRankSum=-0.250;QD=1.38;ReadPosRankSum=2.434;VQSLOD=-0.5250;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,1:15:5.39:0,5,449	1/1:9,0:9:2.17:17,2,0	0/0:49,0:5:6.43:0,6,63	0/0:39,0:7:9.15:0,9,121	0/1:21,0:21:49.84:51,0,50	0/1:16,0:15:36.84:37,0,126	0/0:14,0:13:32.96:0,33,411	0/1:28,0:25:28.96:29,0,180	0/1:18,0:18:5.04:5,0,244	0/1:23,0:20:76.08:76,0,187	0/1:18,0:18:21.80:22,0,205	0/0:23,1:23:3.33:0,3,106	0/0:25,0:24:42.14:0,42,347	0/0:22,2:22:8.92:0,9,71	1/1:21,0:19:35.84:128,36,0	0/1:19,0:19:26.76:27,0,187	0/0:21,0:20:51.17:0,51,730	0/0:15,0:12:7.11:0,7,201	0/1:16,1:16:33.90:34,0,198	0/1:17,0:14:29.70:34,0,30	0/1:11,0:9:3.89:4,0,121	0/0:15,0:13:12.65:0,13,84	0/1:15,2:17:4.38:4,0,35	0/0:13,1:14:16.05:0,16,71	1/1:16,0:15:8.27:45,8,0	0/0:20,0:19:36.89:0,37,322	0/1:29,0:26:33.95:34,0,105	0/0:9,0:8:17.19:0,17,145
chr10	80084799	.	AGAG	A	5780.24	PASS	AB=0.950;AC=36;AF=0.692;AN=52;BaseQRankSum=1.722;DP=519;FS=16.034;HRun=0;HaplotypeScore=94.6838;InbreedingCoeff=0.2752;MQ=45.44;MQ0=22;MQRankSum=4.125;QD=13.17;ReadPosRankSum=-0.017;VQSLOD=3.4696;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:34.16:0,34,677	1/1:9,1:9:17.67:152,18,0	./.	./.	1/1:21,1:21:54.97:412,55,0	1/1:24,1:24:16.01:356,16,0	0/0:18,0:16:41.91:0,42,362	0/1:22,9:18:2.82:152,0,3	0/1:23,1:24:61.14:348,0,61	0/1:23,0:20:70.41:335,0,70	1/1:21,0:21:4.49:305,4,0	1/1:19,1:20:22.18:382,22,0	0/1:23,1:22:30.54:169,0,31	1/1:21,1:20:29.73:321,30,0	1/1:12,5:15:32.95:280,33,0	0/1:17,0:17:22.19:222,0,22	0/0:23,0:21:32.54:0,33,603	0/1:18,0:16:60.82:239,0,61	1/1:16,0:12:10.36:155,10,0	1/1:18,1:15:24.57:210,25,0	0/1:16,0:14:99:180,0,165	1/1:15,0:15:42:370,42,0	1/1:19,1:20:44.87:370,45,0	1/1:13,1:13:29.91:251,30,0	1/1:12,4:15:26.77:199,27,0	0/1:22,1:21:20.48:20,0,334	1/1:23,2:24:39.81:351,40,0	0/0:14,0:13:35.96:0,36,342
chr10	80089451	.	C	CT	17215.88	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=10.322;DP=638;FS=0.000;HRun=6;HaplotypeScore=108.9313;InbreedingCoeff=0.9992;MQ=69.28;MQ0=0;MQRankSum=-3.692;QD=31.82;ReadPosRankSum=1.469;VQSLOD=4.0471;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:73.14:0,73,807	1/1:0,15:15:42.13:528,42,0	0/0:10,0:10:26.89:0,27,254	0/0:12,0:13:28.27:0,28,266	1/1:5,28:33:57.17:1018,57,0	1/1:3,21:24:54.17:678,54,0	0/0:19,0:19:57.11:0,57,575	1/1:3,27:30:81.23:990,81,0	1/1:0,16:16:45.14:566,45,0	1/1:3,24:27:72.23:903,72,0	1/1:4,23:27:69.17:838,69,0	1/1:3,16:19:48.15:603,48,0	1/1:6,14:20:39.12:491,39,0	1/1:2,15:17:42.13:528,42,0	1/1:2,27:29:78.25:980,78,0	1/1:2,18:20:52.42:676,52,0	0/0:24,0:24:60.13:0,60,612	1/1:2,10:12:30.10:376,30,0	1/1:2,22:24:66.14:810,66,0	1/1:3,24:27:72.19:888,72,0	1/1:1,11:12:33.11:415,33,0	1/1:1,18:19:48.15:604,48,0	1/1:3,25:28:72.23:904,72,0	1/1:2,16:18:45.14:566,45,0	1/1:1,33:34:84.27:1056,84,0	1/1:2,33:34:96.29:1183,96,0	1/1:7,35:41:99:1237,99,0	1/1:1,12:13:30.10:377,30,0
chr10	80089741	.	T	TC	17680.96	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-1.749;DP=598;FS=2.911;HRun=3;HaplotypeScore=78.0991;InbreedingCoeff=0.9955;MQ=69.28;MQ0=0;MQRankSum=-5.841;QD=36.46;ReadPosRankSum=2.562;VQSLOD=5.5042;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63:0,63,702	1/1:0,5:5:15.05:209,15,0	0/0:23,0:23:65.52:0,66,743	0/0:20,0:20:51.16:0,51,611	1/1:2,22:24:66.22:906,66,0	1/1:2,27:29:87.20:1155,87,0	0/0:25,0:25:66.18:0,66,771	1/1:7,33:40:99:1354,99,0	1/1:6,20:26:72.23:988,72,0	1/1:3,18:21:60.15:799,60,0	1/1:2,18:20:57.10:771,57,0	1/1:5,13:18:45.12:594,45,0	1/1:2,20:22:66.22:913,66,0	1/1:2,12:14:42.06:547,42,0	1/1:6,23:29:84.17:1098,84,0	1/1:2,14:17:48.16:665,48,0	0/0:22,0:22:63.18:0,63,743	1/1:4,8:12:27.09:377,27,0	1/1:4,19:23:53.77:755,54,0	1/1:2,19:21:57.04:744,57,0	1/1:2,12:14:32.97:414,33,0	1/1:4,12:16:42.11:553,42,0	1/1:2,18:20:56.99:726,57,0	1/1:1,12:13:33.01:419,33,0	1/1:4,20:24:66.04:843,66,0	1/1:4,23:27:78.24:1059,78,0	1/1:6,32:38:99:1457,108,0	1/1:2,10:12:24.08:336,24,0
chr10	80089782	.	GT	G	10844.07	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=8.825;DP=543;FS=3.780;HRun=8;HaplotypeScore=92.0345;InbreedingCoeff=0.9949;MQ=65.21;MQ0=0;MQRankSum=-5.140;QD=25.10;ReadPosRankSum=2.376;VQSLOD=5.4516;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:26:49.74:0,50,677	1/1:0,11:11:33.05:319,33,0	0/0:19,0:19:48.03:0,48,534	0/0:19,0:18:41.46:0,41,458	1/1:3,21:24:56.59:549,57,0	1/1:2,27:29:84.13:811,84,0	0/0:24,0:24:72.21:0,72,859	1/1:7,14:21:51.05:485,51,0	1/1:2,19:21:57.09:550,57,0	1/1:1,22:23:66.11:637,66,0	1/1:4,20:24:63.08:602,63,0	1/1:2,17:19:51.08:492,51,0	1/1:4,10:14:33.03:311,33,0	1/1:1,15:16:48.07:459,48,0	1/1:2,20:22:60.10:579,60,0	1/1:1,13:14:36.06:348,36,0	0/0:23,0:23:57.15:0,57,666	1/1:3,7:10:16.11:171,16,0	1/1:5,16:21:45.05:429,45,0	1/1:3,16:19:48.08:463,48,0	1/1:3,12:15:33.04:319,33,0	1/1:1,10:11:30.05:290,30,0	1/1:0,16:16:48.08:463,48,0	1/1:1,15:16:45.05:428,45,0	1/1:3,21:24:63.09:605,63,0	1/1:3,21:24:63.10:608,63,0	1/1:3,26:29:78.13:753,78,0	1/1:2,7:9:18.03:174,18,0
chr10	80090760	.	G	GT	10822.94	PASS	AB=0.732;AC=46;AF=0.821;AN=56;BaseQRankSum=-7.381;DP=535;FS=4.556;HRun=9;HaplotypeScore=61.4460;InbreedingCoeff=0.7469;MQ=73.43;MQ0=0;MQRankSum=-1.296;QD=23.23;ReadPosRankSum=2.753;VQSLOD=5.9145;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:34.43:0,34,310	1/1:2,8:10:1.02:239,1,0	0/0:13,0:13:29.54:0,30,245	0/1:6,1:7:9.74:10,0,46	1/1:5,30:36:70.02:973,70,0	1/1:2,0:22:54.04:270,54,0	0/0:16,0:16:47.97:0,48,412	1/1:6,30:36:90.21:971,90,0	1/1:0,17:18:50.97:545,51,0	1/1:7,25:33:77.77:815,78,0	1/1:5,29:34:58.13:857,58,0	1/1:3,17:20:48.09:518,48,0	1/1:3,22:27:59.83:626,60,0	1/1:1,9:10:24.06:265,24,0	1/1:2,14:16:36.10:398,36,0	1/1:5,13:19:15.89:386,16,0	0/0:24,0:24:38.48:0,38,444	1/1:4,11:15:32.30:339,32,0	1/1:1,18:19:54.15:597,54,0	1/1:4,13:18:44.89:450,45,0	1/1:0,4:4:9.02:100,9,0	1/1:2,11:14:32.92:346,33,0	1/1:3,15:20:43.23:449,43,0	0/1:3,7:10:1.99:208,0,2	1/1:2,14:16:35.13:371,35,0	1/1:2,0:23:57.71:307,58,0	1/1:8,24:32:20.09:678,20,0	1/1:0,1:7:17.21:104,17,0
chr10	80091021	.	T	TA	3225.28	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.483;DP=527;FS=1.351;HRun=0;HaplotypeScore=77.0358;InbreedingCoeff=0.9978;MQ=72.08;MQ0=0;MQRankSum=-1.090;QD=28.29;ReadPosRankSum=4.903;VQSLOD=3.9795;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:19:54.12:0,54,703	0/0:14,0:14:39.10:0,39,523	0/0:15,0:14:27.68:0,28,448	0/0:17,0:15:36.90:0,37,390	0/0:23,0:23:69.18:0,69,881	0/0:25,0:25:75.23:0,75,1014	0/0:15,0:15:45.14:0,45,612	0/0:31,0:31:87.26:0,87,1143	0/0:17,0:17:51.15:0,51,679	0/0:34,0:34:99:0,99,1288	0/0:23,0:23:69.21:0,69,931	1/1:0,16:16:39.12:482,39,0	1/1:0,15:15:36.11:445,36,0	1/1:1,16:17:36.11:448,36,0	0/0:19,0:19:57.17:0,57,751	0/0:17,0:17:51.17:0,51,703	0/0:12,0:12:36.11:0,36,482	0/0:13,0:13:39.11:0,39,515	0/0:22,0:22:63.17:0,63,791	0/0:21,0:21:60.18:0,60,797	0/0:6,0:6:18.05:0,18,235	1/1:0,10:10:27.04:319,27,0	1/1:1,25:26:66.12:793,66,0	1/1:0,11:11:27.09:338,27,0	1/1:0,19:19:48.15:598,48,0	0/0:26,0:26:78.25:0,78,1059	0/0:34,0:34:99:0,102,1376	0/0:10,0:10:30.07:0,30,379
chr10	80091663	.	AT	A	1193.74	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.950;DP=607;FS=1.198;HRun=7;HaplotypeScore=83.2161;InbreedingCoeff=0.9814;MQ=64.49;MQ0=0;MQRankSum=0.610;QD=21.32;ReadPosRankSum=1.715;VQSLOD=3.2676;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:54.13:0,54,661	0/0:13,0:13:39.12:0,39,491	0/0:21,0:19:36.11:0,36,446	0/0:12,0:12:24.04:0,24,282	0/0:27,0:27:78.24:0,78,969	1/1:3,27:30:72.16:735,72,0	0/0:12,0:12:33.11:0,33,415	0/0:34,0:34:87.73:0,88,1073	0/0:17,0:17:48.15:0,48,604	0/0:24,0:24:63.20:0,63,781	0/0:36,0:36:99:0,99,1224	0/0:26,0:26:72.22:0,72,895	0/0:41,0:41:99:0,114,1433	0/0:30,0:30:87.28:0,87,1094	0/0:17,0:17:45.14:0,45,566	0/0:24,0:24:72.22:0,72,891	0/0:16,0:16:48.15:0,48,604	0/0:10,0:10:23.77:0,24,258	0/0:20,0:20:57.16:0,57,693	0/0:28,1:29:53.63:0,54,962	0/0:20,0:20:54.17:0,54,679	0/0:20,0:20:54.15:0,54,655	0/0:22,0:22:63.20:0,63,793	0/0:8,0:8:18.06:0,18,226	0/0:33,0:33:93.26:0,93,1152	1/1:4,17:21:13.34:444,13,0	0/0:16,0:16:45.10:0,45,536	1/1:0,5:5:15.03:153,15,0
chr10	80092306	.	TA	T	8724.92	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=5.625;DP=389;FS=1.398;HRun=7;HaplotypeScore=50.2024;InbreedingCoeff=0.9088;MQ=69.02;MQ0=0;MQRankSum=-1.301;QD=26.44;ReadPosRankSum=1.869;VQSLOD=5.4030;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.13:0,42,529	1/1:0,9:9:24.05:245,24,0	0/0:10,0:7:8.96:0,9,72	0/0:10,0:5:1.85:0,2,24	1/1:4,20:24:60.13:612,60,0	1/1:1,11:12:27.06:274,27,0	0/0:8,0:8:21.05:0,21,251	1/1:0,22:22:63.12:635,63,0	1/1:0,11:11:27.06:275,27,0	1/1:1,12:13:36.07:360,36,0	1/1:0,19:19:57.13:581,57,0	1/1:2,4:6:9.02:92,9,0	1/1:2,13:15:36.08:367,36,0	1/1:1,11:12:33.08:336,33,0	1/1:1,9:10:27.06:275,27,0	1/1:1,17:18:45.10:459,45,0	0/0:15,0:15:31.47:0,31,447	1/1:0,9:9:27.06:275,27,0	1/1:0,11:11:33.07:331,33,0	1/1:2,22:24:66.09:660,66,0	1/1:0,4:4:12.03:122,12,0	1/1:0,14:14:39.05:387,39,0	1/1:3,16:19:33.07:336,33,0	1/1:0,6:6:18.04:184,18,0	1/1:2,22:24:63.14:642,63,0	1/1:1,18:19:54.12:551,54,0	1/1:3,20:23:54.11:544,54,0	1/1:0,6:6:18.04:183,18,0
chr10	80094129	.	T	TTAATG	33857.85	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-11.410;DP=641;FS=5.624;HRun=0;HaplotypeScore=122.5085;InbreedingCoeff=0.9694;MQ=84.31;MQ0=0;MQRankSum=-10.182;QD=69.38;ReadPosRankSum=4.241;VQSLOD=5.9791;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:82.13:0,82,1666	1/1:1,7:8:15.05:476,15,0	0/0:27,0:27:75.26:0,75,1533	0/0:24,0:24:66.22:0,66,1295	1/1:6,14:22:41.83:1206,42,0	1/1:6,16:22:48.05:1298,48,0	0/0:36,0:36:99:0,108,2254	1/1:9,14:25:72.25:2117,72,0	1/1:5,25:30:81.24:2452,81,0	1/1:2,14:18:48.14:1381,48,0	1/1:4,7:11:21.07:664,21,0	1/1:6,19:28:57.20:1804,57,0	1/1:1,33:34:90.31:2849,90,0	1/1:6,23:30:75.17:2181,75,0	1/1:2,22:26:66.16:1943,66,0	1/1:1,18:19:54.19:1711,54,0	0/0:36,0:36:99:0,108,2326	1/1:1,18:19:51.18:1615,51,0	1/1:5,13:17:45.15:1345,45,0	1/1:4,6:10:20.75:589,21,0	1/1:12,22:37:73.55:1910,74,0	1/1:6,14:19:41.97:1011,42,0	1/1:2,7:10:5.98:115,6,0	1/1:2,17:22:42.14:1332,42,0	1/1:6,10:17:33.11:1003,33,0	1/1:5,14:20:54.14:1506,54,0	1/1:5,28:34:87.30:2684,87,0	1/1:0,8:8:21.07:665,21,0
chr10	80094535	.	A	ACC	19843.79	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=10.171;DP=526;FS=1.774;HRun=1;HaplotypeScore=159.7151;InbreedingCoeff=0.9730;MQ=63.25;MQ0=1;MQRankSum=-13.039;QD=49.24;ReadPosRankSum=1.266;VQSLOD=4.8516;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.27:0,84,1265	1/1:0,2:2:6.02:114,6,0	0/0:21,0:21:57.12:0,57,796	0/0:20,0:20:60.15:0,60,837	1/1:0,28:28:60.43:1169,60,0	1/1:5,14:19:54.18:1010,54,0	0/0:23,0:23:66.20:0,66,969	1/1:13,22:33:84.24:1506,84,0	1/1:2,23:26:78.21:1403,78,0	1/1:0,23:23:69.20:1266,69,0	1/1:1,12:13:23.82:503,24,0	1/1:1,14:15:39.13:752,39,0	1/1:4,13:17:48.12:848,48,0	1/1:3,22:25:75.26:1431,75,0	1/1:2,17:19:57.20:1085,57,0	1/1:3,18:20:57.20:1087,57,0	0/0:27,0:27:81.27:0,81,1233	1/1:3,6:9:27.05:480,27,0	1/1:2,10:12:36.12:704,36,0	1/1:3,13:17:37.77:729,38,0	1/1:1,15:15:36.12:685,36,0	1/1:4,8:12:30.10:551,30,0	1/1:1,17:19:44.34:845,44,0	1/1:0,10:10:18.06:337,18,0	1/1:6,11:17:39.91:706,40,0	1/1:0,18:18:54.19:1033,54,0	1/1:4,16:20:57.20:1084,57,0	1/1:0,10:10:27.09:517,27,0
chr10	80094540	.	T	TTGC	21037.98	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=12.319;DP=537;FS=2.374;HRun=0;HaplotypeScore=164.2113;InbreedingCoeff=0.9772;MQ=65.10;MQ0=0;MQRankSum=-13.452;QD=51.06;ReadPosRankSum=1.383;VQSLOD=6.5810;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.28:0,93,1494	1/1:1,2:3:9:156,9,0	0/0:23,0:23:50.64:0,51,756	0/0:21,0:21:54.18:0,54,828	1/1:8,18:27:45.15:964,45,0	1/1:2,18:20:51.18:1126,51,0	0/0:22,0:22:66.23:0,66,1095	1/1:8,28:34:81.28:1749,81,0	1/1:3,23:26:63.22:1395,63,0	1/1:3,19:22:63.22:1370,63,0	1/1:5,11:16:39.13:783,39,0	1/1:1,12:13:39.13:851,39,0	1/1:3,15:19:42.14:915,42,0	1/1:3,21:24:66.23:1430,66,0	1/1:3,18:21:51.17:1130,51,0	1/1:3,17:20:45.15:1005,45,0	0/0:26,0:26:78.24:0,78,1272	1/1:2,7:10:21.04:424,21,0	1/1:3,11:14:36.12:783,36,0	1/1:3,14:18:42.14:895,42,0	1/1:8,7:14:21.07:465,21,0	1/1:1,8:9:27.09:600,27,0	1/1:5,17:22:45.15:967,45,0	1/1:2,7:9:12.04:264,12,0	1/1:2,14:16:36.12:792,36,0	1/1:3,16:19:57.19:1202,57,0	1/1:2,16:20:51.17:1118,51,0	1/1:2,10:12:30.10:655,30,0
chr10	80095953	.	T	TCATC	2018.53	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-1.958;DP=354;FS=3.837;HRun=0;HaplotypeScore=101.2899;InbreedingCoeff=0.8669;MQ=59.46;MQ0=2;MQRankSum=-6.739;QD=28.04;ReadPosRankSum=-0.402;VQSLOD=3.3453;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:10:6.24:6,0,98	0/0:6,0:6:15.03:0,15,196	0/0:19,0:14:20.20:0,20,264	0/0:16,0:9:24.04:0,24,300	0/0:15,0:15:39.12:0,39,607	0/0:18,0:18:36.06:0,36,486	0/0:8,0:8:18.93:0,19,269	0/0:34,0:34:31.14:0,31,525	0/0:12,0:12:30.08:0,30,438	0/0:15,0:15:37.10:0,37,612	0/0:17,0:17:42.11:0,42,606	1/1:1,7:8:12.04:287,12,0	1/1:1,8:9:12.04:286,12,0	1/1:1,8:9:15.05:358,15,0	0/0:7,0:6:18.06:0,18,290	0/0:8,0:8:18.06:0,18,289	0/0:22,0:22:57.15:0,57,868	0/0:11,0:11:12.02:0,12,168	0/0:11,0:8:21.06:0,21,318	0/0:10,0:10:30.09:0,30,461	0/0:5,0:5:15.01:0,15,214	1/1:1,8:9:17.70:407,18,0	1/1:3,6:9:12.04:217,12,0	1/1:1,3:4:6.02:143,6,0	1/1:1,13:14:21.07:502,21,0	0/0:21,0:21:42.11:0,42,595	0/0:17,0:17:42.09:0,42,611	0/0:10,0:10:21.07:0,21,339
chr10	80096891	.	T	TTCTC	1797	PASS	AB=0.963;AC=25;AF=0.481;AN=52;BaseQRankSum=1.414;DP=624;FS=14.422;HRun=0;HaplotypeScore=190.4965;InbreedingCoeff=0.3519;MQ=61.25;MQ0=11;MQRankSum=-1.297;QD=5.05;ReadPosRankSum=-0.286;VQSLOD=1.5557;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,16:34:20.54:384,21,0	0/1:4,0:5:0:0,0,0	0/0:31,0:16:0.47:0,0,1	0/0:38,0:19:3.01:0,3,48	1/1:20,0:20:7.54:53,8,0	1/1:13,0:13:5.79:37,6,0	0/0:25,0:26:25.79:0,26,677	0/1:36,0:34:20.13:82,0,20	1/1:11,0:11:5:26,5,0	0/1:34,0:33:5.85:212,0,6	1/1:20,0:20:9:99,9,0	0/0:27,0:27:37.18:0,37,566	0/0:20,0:19:20.54:0,21,282	0/0:15,0:15:6:0,6,70	0/1:35,0:34:5.93:148,0,6	0/1:25,0:25:2.31:225,0,2	0/0:24,0:25:20.15:0,20,558	1/1:9,0:9:5.98:59,6,0	1/1:19,0:18:19.56:139,20,0	1/1:22,0:23:11.73:85,12,0	./.	0/0:21,0:22:5.53:0,6,57	0/0:17,0:18:2.80:0,3,48	0/0:24,0:24:6.47:0,6,72	./.	0/1:26,0:26:26.80:148,0,27	0/1:31,0:32:20.53:179,0,21	1/1:10,0:10:4.95:89,5,0
chr10	80096921	.	CTG	C	908.87	PASS	AB=0.977;AC=20;AF=0.385;AN=52;BaseQRankSum=2.552;DP=639;FS=14.052;HRun=0;HaplotypeScore=165.0736;InbreedingCoeff=0.0942;MQ=35.00;MQ0=26;MQRankSum=2.272;QD=3.09;ReadPosRankSum=0.414;VQSLOD=1.6506;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:20.76:0,21,251	1/1:3,0:2:0.47:1,0,0	0/0:32,0:2:3.45:0,3,23	0/0:44,0:8:11.83:0,12,120	1/1:23,0:22:2.50:23,3,0	1/1:18,0:18:2.90:15,3,0	0/0:23,0:23:48.54:0,49,889	0/0:46,0:43:59.21:0,59,652	1/1:9,0:9:0.11:21,0,0	0/1:34,1:34:99:192,0,295	1/1:22,2:22:5.78:49,6,0	0/0:27,1:28:31.66:0,32,696	0/0:22,0:20:24.06:0,24,370	0/0:13,0:11:6.77:0,7,105	0/1:28,0:26:2.75:119,0,3	0/1:28,0:26:28.18:136,0,28	0/0:24,0:24:44.39:0,44,896	1/1:5,0:5:2.45:19,2,0	0/1:21,0:17:41.98:42,0,167	0/1:25,0:23:9.03:45,0,9	./.	0/0:23,0:23:5.94:0,6,57	0/0:14,0:14:3.01:0,3,55	0/0:20,0:19:5.71:0,6,86	./.	0/1:27,1:25:99:185,0,109	0/1:30,0:29:99:121,0,115	0/1:14,1:14:29.13:89,0,29
chr10	80096922	.	TGTCC	T	2724.19	PASS	AB=0.973;AC=30;AF=0.556;AN=54;BaseQRankSum=5.630;DP=635;FS=14.734;HRun=0;HaplotypeScore=168.0390;InbreedingCoeff=0.4646;MQ=34.87;MQ0=26;MQRankSum=-3.687;QD=6.97;ReadPosRankSum=-3.162;VQSLOD=1.5045;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:22.88:0,23,345	1/1:3,0:2:3.01:34,3,0	0/0:32,0:3:6.49:0,6,92	0/0:44,0:9:20.49:0,20,293	1/1:21,2:22:9:88,9,0	1/1:15,3:18:9.14:81,9,0	0/0:23,0:23:15.25:0,15,1308	0/1:46,0:42:53.87:139,0,54	1/1:8,1:9:6.48:65,6,0	0/1:35,1:34:30.22:430,0,30	1/1:23,0:21:9:99,9,0	0/0:27,0:27:12.62:0,13,434	0/0:22,0:20:18.47:0,18,157	0/1:12,0:10:5.63:6,0,59	1/1:28,1:26:24.26:253,24,0	1/1:26,2:26:31.58:347,32,0	0/0:24,0:24:43.89:0,44,1376	1/1:5,0:5:5.98:59,6,0	0/1:18,2:16:31.51:217,0,32	1/1:25,0:23:14.49:103,14,0	./.	0/0:24,0:24:3.99:0,4,26	0/0:15,0:15:2.58:0,3,43	0/1:20,0:19:14.51:15,0,56	0/1:21,1:22:0:0,0,0	1/1:27,0:24:28:445,28,0	1/1:28,2:29:13:354,13,0	1/1:15,0:14:21.17:175,21,0
chr10	80096929	.	CTG	C	461.97	PASS	AB=0.988;AC=18;AF=0.375;AN=48;BaseQRankSum=4.998;DP=624;FS=27.796;HRun=0;HaplotypeScore=161.9225;InbreedingCoeff=0.0014;MQ=32.85;MQ0=28;MQRankSum=3.376;QD=1.53;ReadPosRankSum=-0.321;VQSLOD=0.7618;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:17.74:0,18,346	1/1:5,0:3:3.48:31,3,0	0/0:28,0:2:6.02:0,6,100	0/0:43,0:10:21.41:0,21,342	1/1:22,0:21:2.99:24,3,0	1/1:17,0:17:2.90:16,3,0	0/0:21,0:21:43.77:0,44,834	0/0:49,0:45:99:0,113,1498	0/1:8,0:8:0.70:20,0,1	0/1:35,1:34:68.22:68,0,780	./.	0/0:27,0:26:16.20:0,16,411	0/0:19,0:17:11.62:0,12,109	0/1:10,0:8:4.19:4,0,18	0/1:31,1:29:4.25:113,0,4	0/1:26,2:26:31.09:100,0,31	0/0:20,0:20:56.61:0,57,945	./.	0/1:23,0:19:19.60:20,0,341	0/1:26,0:24:22.86:23,0,61	./.	1/1:23,0:23:1.72:3,2,0	0/0:18,0:17:3.01:0,3,33	0/0:19,0:19:5.59:0,6,69	./.	0/1:26,0:22:57.12:57,0,182	0/1:32,0:31:70.78:71,0,285	0/1:13,0:12:37.33:54,0,37
chr10	80096937	.	GTCTC	G	1698.05	PASS	AB=0.890;AC=17;AF=0.370;AN=46;BaseQRankSum=5.716;DP=621;FS=3.289;HRun=0;HaplotypeScore=163.3487;InbreedingCoeff=-0.1451;MQ=31.45;MQ0=30;MQRankSum=-5.772;QD=4.68;ReadPosRankSum=4.057;VQSLOD=2.6974;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:20.94:0,21,461	0/0:4,0:2:3.01:0,3,30	0/0:27,0:2:6.02:0,6,155	0/0:38,0:10:18.27:0,18,447	0/0:21,2:22:5.92:0,6,40	0/0:10,8:16:0.47:0,0,1	0/0:21,0:21:51.15:0,51,1118	0/1:58,0:53:99:225,0,184	0/0:10,0:10:2.91:0,3,21	0/1:38,0:35:99:171,0,267	./.	0/1:14,12:25:18.69:255,0,19	1/1:4,15:17:9.03:165,9,0	1/1:3,6:8:2.90:17,3,0	0/1:31,0:28:6.73:20,0,7	0/1:26,0:24:62.55:63,0,64	0/0:21,0:21:54.06:0,54,1295	./.	0/1:26,0:21:76.04:76,0,147	0/1:25,0:23:7.55:8,0,118	./.	1/1:2,20:21:0.47:1,0,0	./.	0/1:9,10:19:10.22:49,0,10	./.	0/1:14,8:18:9.38:526,0,9	0/1:32,1:32:99:145,0,264	0/1:6,3:8:8.14:114,0,8
chr10	80096941	.	C	CTG	2911.63	PASS	AB=0.847;AC=13;AF=0.283;AN=46;BaseQRankSum=3.584;DP=617;FS=4.978;HRun=0;HaplotypeScore=150.8160;InbreedingCoeff=-0.3273;MQ=31.25;MQ0=27;MQRankSum=-7.633;QD=8.56;ReadPosRankSum=4.279;VQSLOD=3.2638;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:20.66:0,21,296	0/0:3,2:3:2.36:0,2,12	0/0:23,0:2:6.02:0,6,92	0/0:34,0:9:17.09:0,17,268	0/0:18,5:22:5.77:0,6,30	0/0:17,1:16:1.25:0,1,4	0/0:24,0:24:54.13:0,54,740	0/1:37,21:52:7.03:1225,0,7	0/0:9,1:10:0.73:0,1,11	0/1:24,13:34:24.19:648,0,24	./.	0/1:24,1:24:34.53:53,0,35	0/1:19,1:18:9.39:33,0,9	0/1:10,0:9:7.29:7,0,15	0/1:23,10:30:20.58:21,0,21	0/1:18,7:23:7.71:17,0,8	0/0:22,0:22:57.16:0,57,826	./.	0/1:16,9:20:49.66:317,0,50	0/1:15,11:23:44.07:44,0,65	./.	0/0:22,0:21:0.47:0,0,1	./.	0/1:18,0:18:10.46:33,0,10	./.	0/1:21,1:18:25.91:309,0,26	0/1:24,9:32:38.29:271,0,38	0/1:7,1:7:8.93:62,0,9
chr10	80096943	.	CTCTG	C	1707.76	PASS	AB=0.939;AC=24;AF=0.545;AN=44;BaseQRankSum=2.835;DP=617;FS=1.090;HRun=0;HaplotypeScore=157.9999;InbreedingCoeff=-0.0561;MQ=31.65;MQ0=27;MQRankSum=-1.293;QD=4.16;ReadPosRankSum=-3.546;VQSLOD=1.6153;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:22:5.33:5,0,394	0/1:5,0:3:17.94:18,0,21	0/0:22,0:2:6.02:0,6,147	0/0:32,0:9:19.15:0,19,443	0/0:20,3:21:2.22:0,2,7	1/1:18,1:17:1.98:35,2,0	0/0:25,0:25:54.11:0,54,1159	0/1:56,0:50:44:44,0,248	./.	0/1:35,3:35:99:237,0,314	./.	1/1:22,1:22:16.66:239,17,0	1/1:20,0:18:2.07:104,2,0	1/1:10,0:9:2.29:37,2,0	1/1:30,4:31:6.79:54,7,0	0/1:22,5:25:45.30:120,0,45	0/0:22,0:22:59.66:0,60,1339	./.	0/1:23,1:20:99:115,0,113	0/1:24,2:23:5.50:6,0,94	./.	1/1:23,0:22:0.47:1,0,0	./.	0/1:17,0:17:9.18:32,0,9	./.	0/1:20,3:20:7.64:488,0,8	0/1:26,6:31:99:199,0,226	1/1:6,2:7:8.61:113,9,0
chr10	80096945	.	CTGTG	C	1575.16	PASS	AB=0.981;AC=25;AF=0.543;AN=46;BaseQRankSum=5.778;DP=613;FS=8.778;HRun=0;HaplotypeScore=154.9736;InbreedingCoeff=-0.1296;MQ=31.98;MQ0=24;MQRankSum=-2.986;QD=3.43;ReadPosRankSum=-1.649;VQSLOD=1.7433;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:23:32.02:32,0,360	0/1:6,0:4:10.76:11,0,26	0/0:20,0:2:6.02:0,6,136	0/0:29,0:9:20.64:0,21,412	1/1:23,0:21:2.84:14,3,0	0/1:18,0:16:0.52:29,0,1	0/0:24,0:24:54.18:0,54,1211	0/1:55,0:49:78.53:79,0,471	./.	0/1:38,0:35:99:170,0,401	./.	1/1:22,0:22:31.69:281,32,0	1/1:22,0:20:5.03:94,5,0	0/1:10,0:9:14.94:69,0,15	0/1:32,1:30:3.26:79,0,3	0/1:27,0:25:79.08:103,0,79	0/0:25,0:25:66.37:0,66,1406	./.	0/1:23,1:19:99:120,0,174	0/1:25,0:22:2.77:3,0,109	./.	1/1:24,0:23:0.47:1,0,0	./.	0/1:14,1:16:2.71:15,0,3	1/1:26,0:25:3.01:36,3,0	0/1:22,1:19:43.86:313,0,44	0/1:33,1:33:99:201,0,320	1/1:7,0:6:8.37:67,8,0
chr10	80096953	.	CTG	C	386.24	PASS	AB=0.985;AC=19;AF=0.365;AN=52;BaseQRankSum=0.947;DP=639;FS=26.622;HRun=0;HaplotypeScore=154.3491;InbreedingCoeff=0.0645;MQ=33.65;MQ0=17;MQRankSum=2.966;QD=1.08;ReadPosRankSum=-3.883;VQSLOD=-0.3087;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:25:20.17:20,0,193	0/0:8,0:6:8.92:0,9,106	0/0:10,0:1:3.01:0,3,58	0/1:20,0:8:0.10:0,0,182	0/1:23,0:21:20.17:20,0,42	0/1:19,0:17:4.28:4,0,52	0/0:26,0:26:50.27:0,50,840	0/0:54,0:47:99:0,132,1845	0/0:9,0:9:3.01:0,3,48	0/0:40,0:37:47.57:0,48,1154	./.	0/1:25,0:24:64.74:65,0,157	0/1:26,1:25:68.07:68,0,118	1/1:16,1:16:14.78:93,15,0	0/1:33,0:30:17.93:18,0,43	0/0:27,0:25:14.91:0,15,216	0/0:26,0:26:62:0,62,943	./.	0/0:26,0:21:30.12:0,30,594	0/0:27,0:24:6.21:0,6,235	1/1:12,0:11:2.97:20,3,0	1/1:26,0:25:3.47:25,3,0	0/1:18,0:17:0:0,0,0	0/1:16,2:18:25.30:74,0,25	1/1:31,0:30:8.83:64,9,0	0/1:27,0:23:62.58:63,0,471	0/1:33,1:33:0.25:0,0,448	0/0:7,0:6:5.95:0,6,60
chr10	80096961	.	GTC	G	256.10	PASS	AB=0.974;AC=13;AF=0.260;AN=50;BaseQRankSum=1.349;DP=661;FS=3.273;HRun=0;HaplotypeScore=146.7859;InbreedingCoeff=-0.1203;MQ=35.44;MQ0=14;MQRankSum=0.792;QD=0.71;ReadPosRankSum=0.913;VQSLOD=2.8102;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,1:30:0.55:1,0,221	0/0:9,0:7:9.03:0,9,134	./.	./.	0/0:27,0:26:0.37:0,0,62	1/1:20,1:20:6.57:76,7,0	0/1:23,1:27:75.33:75,0,241	0/1:53,1:47:15.13:15,0,66	0/0:11,0:11:6:0,6,68	0/1:42,1:40:10.57:11,0,195	0/0:18,1:17:3.01:0,3,44	0/1:23,0:22:0.06:0,0,33	0/1:28,0:26:3.78:4,0,40	0/0:18,0:17:3.29:0,3,15	0/1:24,0:25:23.66:51,0,24	0/0:23,0:26:17.08:0,17,113	0/1:26,3:29:55.46:55,0,387	0/0:6,0:6:0.47:0,0,1	0/0:28,0:21:1.25:0,1,3	0/0:24,2:23:9.03:0,9,136	0/1:15,0:14:6.55:7,0,20	0/0:27,0:26:0.47:0,0,1	0/0:16,0:15:3.46:0,3,25	0/1:23,0:23:1.69:12,0,2	0/0:30,0:29:3.15:0,3,12	0/0:28,0:25:22.06:0,22,179	0/1:36,2:37:71.08:71,0,279	./.
chr10	80097891	.	AAAT	A	25338.03	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=18.256;DP=775;FS=10.254;HRun=0;HaplotypeScore=196.4485;InbreedingCoeff=0.9759;MQ=70.00;MQ0=0;MQRankSum=-9.826;QD=42.66;ReadPosRankSum=3.622;VQSLOD=5.1883;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,162,3479	1/1:0,12:12:30.10:499,30,0	0/0:18,0:18:47.65:0,48,960	0/0:29,0:29:84.29:0,84,1811	1/1:1,26:27:72.20:1168,72,0	1/1:0,29:29:81.28:1349,81,0	0/0:35,0:35:99:0,105,2375	1/1:3,21:23:57.19:949,57,0	1/1:1,24:25:66.23:1099,66,0	1/1:2,28:30:81.19:1237,81,0	1/1:0,20:20:51.13:818,51,0	1/1:2,26:28:69.24:1149,69,0	1/1:2,15:17:39.13:649,39,0	1/1:0,39:39:99:1798,108,0	1/1:2,43:45:99:1948,117,0	1/1:0,24:24:69.24:1149,69,0	0/0:40,0:40:99:0,117,2582	1/1:2,19:21:54.18:899,54,0	1/1:2,16:16:42.13:675,42,0	1/1:1,29:30:81.23:1319,81,0	1/1:0,20:19:48.16:799,48,0	1/1:2,27:29:81.23:1319,81,0	1/1:1,30:31:81.23:1318,81,0	1/1:6,30:36:69.19:1119,69,0	1/1:0,16:16:48.16:799,48,0	1/1:0,30:30:90.26:1429,90,0	1/1:1,40:41:99:1748,105,0	1/1:0,2:2:6.02:100,6,0
chr10	80099572	.	AT	A	8737.67	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=12.340;DP=558;FS=5.148;HRun=7;HaplotypeScore=57.6329;InbreedingCoeff=0.9695;MQ=81.07;MQ0=0;MQRankSum=-2.608;QD=26.97;ReadPosRankSum=2.722;VQSLOD=5.7251;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.28:0,87,1094	1/1:1,6:7:15.03:153,15,0	0/0:13,0:13:33.10:0,33,401	0/0:17,0:17:32.93:0,33,373	1/1:4,25:29:54.10:550,54,0	1/1:1,27:28:78.18:796,78,0	0/0:17,0:17:48.15:0,48,604	1/1:5,36:41:99:1102,108,0	1/1:0,9:9:24.05:245,24,0	1/1:0,28:28:84.14:831,84,0	1/1:1,19:20:57.13:581,57,0	0/0:14,0:14:36.12:0,36,453	0/0:16,1:17:18.53:0,19,528	0/0:15,0:15:45.14:0,45,565	1/1:0,21:21:60.14:612,60,0	1/1:0,17:17:45.10:459,45,0	0/0:28,0:28:81.26:0,81,1018	1/1:0,1:1:3.01:31,3,0	1/1:1,14:15:42.05:412,42,0	1/1:4,26:30:75.16:765,75,0	1/1:0,8:8:24.05:245,24,0	0/0:13,0:13:33.11:0,33,415	0/0:25,0:25:72.23:0,72,905	0/0:10,0:10:27.09:0,27,339	0/0:34,0:34:99:0,99,1231	1/1:2,22:24:66.15:673,66,0	1/1:0,40:40:99:1129,110,0	1/1:1,5:6:15.03:153,15,0
chr10	80101577	.	GCTTTCTTTCTTTCTTT	G	13753.10	PASS	AB=0.978;AC=34;AF=0.630;AN=54;BaseQRankSum=2.897;DP=604;FS=21.202;HRun=0;HaplotypeScore=350.9766;InbreedingCoeff=-0.0040;MQ=49.81;MQ0=9;MQRankSum=-5.108;QD=28.42;ReadPosRankSum=6.303;VQSLOD=2.1324;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:21:12.04:0,12,181	0/1:15,0:15:94.96:517,0,95	./.	0/0:28,0:11:1.04:0,1,134	1/1:26,0:26:57.13:823,57,0	1/1:22,0:21:40.63:655,41,0	0/0:19,0:19:51.16:0,51,1912	0/1:29,0:27:99:148,0,678	0/1:15,0:15:99:345,0,122	0/1:24,0:22:99:544,0,120	0/1:15,0:15:89.19:306,0,89	1/1:12,0:12:33.04:567,33,0	1/1:26,0:24:63.06:1186,63,0	1/1:20,0:20:39.13:712,39,0	0/1:18,0:18:99:536,0,111	0/1:26,0:26:99:788,0,120	0/0:31,0:30:78.19:0,78,3503	0/1:11,0:9:99:162,0,301	0/1:14,8:17:99:322,0,131	0/1:35,0:35:99:921,0,103	0/1:10,0:10:86.66:115,0,87	1/1:25,0:25:46.47:757,46,0	1/1:22,0:22:43.14:586,43,0	1/1:14,0:14:17.61:287,18,0	1/1:29,0:29:75.13:1235,75,0	1/1:20,5:25:44.82:772,45,0	0/1:28,0:28:21.88:881,0,22	1/1:15,0:14:30.03:588,30,0
chr10	80101598	.	CTTTCTTTCTTT	C	17542	PASS	AB=0.792;AC=31;AF=0.554;AN=56;BaseQRankSum=4.619;DP=581;FS=7.323;HRun=0;HaplotypeScore=308.3045;InbreedingCoeff=-0.0227;MQ=41.65;MQ0=10;MQRankSum=-7.135;QD=39.96;ReadPosRankSum=7.277;VQSLOD=2.9232;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:25.51:0,26,322	0/1:9,10:19:99:826,0,217	0/0:17,0:3:5.74:0,6,97	0/0:22,0:6:8.47:0,8,171	1/1:16,9:25:19.63:836,20,0	1/1:13,6:18:10.98:788,11,0	0/0:21,0:21:63.20:0,63,2139	0/0:32,0:32:4.86:0,5,1193	0/1:11,4:15:99:408,0,209	0/1:13,5:16:99:526,0,272	0/1:5,8:13:99:575,0,200	0/1:11,5:16:4.04:719,0,4	1/1:19,8:27:18.13:1172,18,0	1/1:12,9:21:34.48:1053,34,0	0/1:10,10:20:99:897,0,224	0/1:12,14:26:99:1241,0,250	0/0:30,0:29:71.30:0,71,3465	0/1:10,1:10:99:117,0,470	0/1:21,0:19:99:125,0,504	0/1:15,11:24:99:1206,0,203	0/1:6,0:6:22.47:22,0,165	1/1:17,10:27:24.11:1183,24,0	1/1:9,8:17:3.95:793,4,0	0/1:19,1:20:31.27:285,0,31	1/1:11,18:29:76.51:1915,77,0	1/1:11,11:21:0.59:1057,1,0	0/1:22,7:28:99:1225,0,161	1/1:8,4:11:29.72:573,30,0
chr10	80101611	.	TTCCTTCCTTCCTTCCATCCATC	T	5098.21	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=3.442;DP=569;FS=7.061;HRun=0;HaplotypeScore=476.4938;InbreedingCoeff=-0.2051;MQ=40.48;MQ0=2;MQRankSum=-9.602;QD=16.39;ReadPosRankSum=2.637;VQSLOD=0.8509;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:45.79:46,0,2111	0/1:18,0:18:99:385,0,265	0/0:17,0:4:11.99:0,12,407	0/0:12,0:5:15.05:0,15,625	0/0:15,6:21:9.90:0,10,348	0/0:21,0:21:57.13:0,57,2507	0/0:21,0:21:63.19:0,63,3545	0/1:33,0:33:99:293,0,453	0/1:13,0:13:99:337,0,135	0/1:15,0:13:99:622,0,197	0/1:13,0:13:99:400,0,226	0/1:21,0:21:99:172,0,2174	0/0:29,0:28:75.04:0,75,2739	0/1:24,0:24:28.96:29,0,2527	0/1:19,0:19:99:348,0,473	0/1:25,0:25:99:590,0,513	0/0:31,0:31:83.74:0,84,5882	1/1:9,0:9:3.43:376,3,0	0/1:26,0:23:99:230,0,333	0/1:22,0:20:99:320,0,476	1/1:6,0:6:9.03:167,9,0	0/0:25,0:25:72.25:0,72,2882	0/0:17,0:17:42.10:0,42,1438	0/1:16,0:16:99:155,0,856	0/0:31,0:31:78.19:0,78,2500	0/0:26,0:25:56.93:0,57,2701	0/1:26,0:25:99:631,0,320	0/0:6,0:6:18.06:0,18,671
chr10	80101625	.	CCATCCATCTTCTTTCTTT	C	1977.52	PASS	AB=0.976;AC=17;AF=0.304;AN=56;BaseQRankSum=3.640;DP=552;FS=18.508;HRun=0;HaplotypeScore=429.7599;InbreedingCoeff=-0.2984;MQ=39.59;MQ0=3;MQRankSum=-7.237;QD=6.82;ReadPosRankSum=1.459;VQSLOD=0.7050;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:3.12:3,0,1585	0/1:19,0:18:99:210,0,477	0/0:21,0:9:26.76:0,27,899	0/0:19,0:10:30.10:0,30,1003	0/0:17,0:17:2.74:0,3,311	0/0:19,0:19:54.19:0,54,2007	0/0:20,0:20:60.21:0,60,3666	0/1:34,0:32:68.39:68,0,992	0/1:13,0:13:99:228,0,129	0/1:13,0:12:91.74:210,0,92	0/1:13,0:13:99:170,0,333	0/1:20,5:25:99:232,0,2508	0/0:26,1:26:11.09:0,11,2829	0/1:21,7:28:98.49:98,0,2712	0/1:17,0:17:99:124,0,470	0/1:24,0:24:99:162,0,445	0/0:31,0:31:54.33:0,54,4854	0/1:8,0:8:38.07:38,0,93	0/1:17,0:14:78.28:78,0,379	0/1:18,0:16:53.86:54,0,577	1/1:5,0:5:6.42:44,6,0	0/0:28,0:28:57.60:0,58,3272	0/0:15,0:15:26.27:0,26,1397	0/1:12,0:12:99:145,0,1104	0/0:34,0:34:71.85:0,72,2793	0/0:25,0:24:63.69:0,64,2274	0/1:21,0:20:99:271,0,466	0/0:6,0:6:10.04:0,10,460
chr10	80101629	.	CCAT	C	798.32	PASS	AB=0.942;AC=15;AF=0.268;AN=56;BaseQRankSum=0.289;DP=553;FS=23.393;HRun=0;HaplotypeScore=286.8438;InbreedingCoeff=-0.2479;MQ=39.73;MQ0=1;MQRankSum=-2.387;QD=3.52;ReadPosRankSum=-3.552;VQSLOD=0.5618;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,1:22:42.27:42,0,695	0/1:17,2:18:57.79:58,0,618	0/0:23,0:10:5.09:0,5,476	0/0:18,0:10:30.10:0,30,581	0/0:17,0:17:24.96:0,25,381	0/0:20,0:20:54.04:0,54,1068	0/0:25,0:25:75.24:0,75,1580	0/1:27,1:26:67.39:67,0,750	0/1:10,3:13:72.72:73,0,421	0/1:12,1:12:99:149,0,221	0/1:12,1:13:87.01:87,0,392	0/0:25,0:25:14.49:0,14,1019	0/0:27,0:26:58.81:0,59,1095	0/0:28,0:28:59.55:0,60,1144	0/1:15,2:17:84.15:84,0,545	0/1:22,2:24:99:116,0,759	0/0:30,0:30:64.97:0,65,1659	0/1:8,0:8:70.20:70,0,99	0/1:12,1:10:64.48:64,0,423	0/1:18,0:16:37.03:37,0,584	1/1:4,0:4:2.99:24,3,0	0/0:29,0:29:53.95:0,54,1496	0/0:17,0:17:13.31:0,13,648	0/1:14,0:14:21.20:21,0,515	0/0:35,0:35:84.27:0,84,1498	0/0:25,0:24:63.69:0,64,1176	0/1:21,0:20:61.63:62,0,780	0/0:6,0:6:9.34:0,9,248
chr10	80101631	.	ATC	A	86.50	PASS	AB=0.900;AC=4;AF=0.071;AN=56;BaseQRankSum=3.494;DP=569;FS=12.055;HRun=0;HaplotypeScore=287.7030;InbreedingCoeff=0.3484;MQ=39.47;MQ0=1;MQRankSum=-4.202;QD=4.81;ReadPosRankSum=-3.107;VQSLOD=1.2548;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:37.22:0,37,779	0/0:19,0:18:42.02:0,42,753	0/0:23,0:10:26.68:0,27,470	0/0:19,0:10:30.10:0,30,552	0/0:17,0:17:24.96:0,25,403	0/0:23,0:23:51.49:0,51,1012	0/0:25,0:25:75.24:0,75,1385	0/0:29,0:27:31:0,31,857	0/0:15,0:15:22.33:0,22,449	0/0:15,0:14:5.71:0,6,257	0/0:14,0:14:27.44:0,27,500	0/0:25,0:25:45.73:0,46,935	0/0:27,0:26:59.14:0,59,988	0/0:28,0:28:60.98:0,61,1076	0/0:18,0:17:34.21:0,34,658	0/0:25,0:24:39.65:0,40,826	0/0:30,0:30:51.41:0,51,1389	0/1:6,2:8:93.68:134,0,94	0/0:13,0:10:14.69:0,15,415	0/0:18,0:16:40.60:0,41,710	1/1:3,1:4:3.48:45,3,0	0/0:30,0:30:73.53:0,74,1396	0/0:20,0:20:17.92:0,18,625	0/0:13,1:14:23.09:0,23,496	0/0:35,0:35:84.28:0,84,1494	0/0:26,0:25:63.13:0,63,1164	0/0:21,0:20:52.36:0,52,905	0/1:6,0:6:1.27:1,0,261
chr10	80101643	.	TCTTCCTTC	T	1946.71	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=3.707;DP=599;FS=2.171;HRun=0;HaplotypeScore=353.8983;InbreedingCoeff=-0.1771;MQ=39.19;MQ0=2;MQRankSum=-4.063;QD=5.68;ReadPosRankSum=4.685;VQSLOD=1.3523;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,6:23:43.77:804,44,0	1/1:17,0:16:15.02:159,15,0	0/0:20,0:8:8.96:0,9,123	0/0:15,0:9:13.52:0,14,163	0/1:20,0:19:15.46:15,0,239	0/1:25,0:23:99:194,0,166	0/0:25,0:25:48.16:0,48,1430	0/1:38,0:35:99:145,0,186	0/1:13,0:12:99:116,0,110	0/1:19,0:17:85.22:85,0,344	0/1:19,0:18:59.42:59,0,170	0/1:26,0:26:35:35,0,830	0/0:29,0:27:48.12:0,48,1022	0/0:26,0:26:39.95:0,40,725	0/1:20,0:19:79.14:79,0,218	0/1:24,0:22:5.31:5,0,268	0/0:26,0:26:60.12:0,60,1265	0/0:9,0:9:2.39:0,2,15	0/1:8,0:7:52.90:53,0,96	0/1:28,0:26:46.56:47,0,398	0/0:3,0:3:3.01:0,3,47	0/0:31,0:31:63.05:0,63,1035	0/0:18,0:18:39.04:0,39,845	0/0:18,0:18:33.68:0,34,509	0/0:36,0:34:30.10:0,30,532	0/1:28,0:27:99:119,0,393	0/1:27,0:24:99:163,0,203	0/1:8,0:8:35.21:35,0,41
chr10	80101645	.	TTCC	T	1089.30	PASS	AB=0.889;AC=14;AF=0.250;AN=56;BaseQRankSum=8.805;DP=597;FS=23.334;HRun=0;HaplotypeScore=302.2099;InbreedingCoeff=-0.1773;MQ=39.45;MQ0=2;MQRankSum=-5.171;QD=4.08;ReadPosRankSum=1.567;VQSLOD=1.2697;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:40.68:41,0,96	1/1:9,6:15:7.73:170,8,0	0/0:18,0:8:23.66:0,24,298	0/0:15,0:9:24.07:0,24,341	0/1:19,1:19:40.85:41,0,128	0/0:26,0:24:71.13:0,71,775	0/0:25,0:25:75.20:0,75,1336	0/1:15,0:35:99:116,0,152	0/1:9,4:12:49.60:146,0,50	0/1:18,2:19:81.57:82,0,243	0/1:16,2:17:99:125,0,147	0/0:26,0:26:47.18:0,47,639	0/0:29,0:27:59.93:0,60,677	0/0:26,0:26:55.10:0,55,587	0/1:17,2:18:94.71:95,0,96	0/1:24,0:22:49.48:49,0,137	0/0:26,0:26:78.21:0,78,1310	0/1:9,0:9:15.68:16,0,25	0/1:7,1:7:52.25:52,0,114	0/1:26,3:27:93.53:94,0,202	0/0:2,0:2:3.01:0,3,50	0/0:31,0:31:60.87:0,61,837	0/0:18,0:18:50.92:0,51,585	0/0:18,0:18:32.24:0,32,398	0/0:36,0:34:69.49:0,69,660	0/0:28,0:27:71.81:0,72,885	0/1:24,5:26:99:222,0,166	0/0:6,0:6:17.64:0,18,152
chr10	80101664	.	C	CTTTCT	2952.69	PASS	AB=0.977;AC=16;AF=0.286;AN=56;BaseQRankSum=8.274;DP=562;FS=4.552;HRun=0;HaplotypeScore=254.8879;InbreedingCoeff=-0.0362;MQ=41.34;MQ0=6;MQRankSum=-6.458;QD=10.25;ReadPosRankSum=-2.713;VQSLOD=2.4061;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:26.74:0,27,731	1/1:10,0:9:20.94:169,21,0	0/0:8,0:5:11.78:0,12,123	0/0:8,0:6:17.90:0,18,233	0/1:22,0:21:6.59:205,0,7	0/1:20,6:24:41.36:440,0,41	0/0:23,0:23:69.18:0,69,1305	0/1:45,0:39:2.81:3,0,819	1/1:14,0:13:26.67:219,27,0	0/1:26,0:24:99:324,0,174	0/1:13,0:12:38.31:163,0,38	0/0:22,0:22:32.22:0,32,388	0/0:30,0:28:35.44:0,35,420	0/0:25,0:25:44.70:0,45,552	0/1:16,1:16:9.43:205,0,9	0/1:21,0:19:22.54:241,0,23	0/0:29,0:28:59.82:0,60,1264	0/1:6,0:6:39.39:71,0,39	0/1:12,0:9:66.20:129,0,66	0/1:29,0:27:83.02:339,0,83	0/0:3,0:3:3.01:0,3,32	0/0:33,0:33:89.42:0,89,1103	0/0:20,0:20:46.86:0,47,488	0/0:18,0:18:43.21:0,43,525	0/0:27,0:25:29.67:0,30,334	0/1:26,1:26:25.02:400,0,25	0/1:20,0:17:61.31:211,0,61	0/0:3,0:4:2.55:0,3,63
chr10	80101672	.	C	CTTCTTTCT	12239.09	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=4.756;DP=573;FS=16.779;HRun=0;HaplotypeScore=236.7121;InbreedingCoeff=0.6288;MQ=42.87;MQ0=7;MQRankSum=-4.073;QD=23.81;ReadPosRankSum=1.087;VQSLOD=2.3949;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:0.05:0,0,439	1/1:9,0:8:6.02:93,6,0	0/0:4,0:2:6.02:0,6,70	0/0:5,0:4:6.02:0,6,101	1/1:25,0:24:45.11:811,45,0	1/1:23,0:21:47.98:1051,48,0	0/0:25,0:25:45.11:0,45,662	1/1:49,0:43:35.04:398,35,0	1/1:20,0:19:33.02:472,33,0	1/1:27,0:25:58.73:874,59,0	1/1:13,0:12:21.56:449,22,0	1/1:22,1:23:32.99:613,33,0	1/1:14,13:32:12.04:418,12,0	1/1:25,0:25:24.08:417,24,0	1/1:16,0:15:27.09:463,27,0	1/1:19,0:17:27.04:424,27,0	0/1:29,0:28:34.81:35,0,644	1/1:7,0:6:8.98:111,9,0	1/1:17,0:14:24.02:430,24,0	1/1:28,0:26:66.13:1053,66,0	1/1:4,0:4:5.89:37,6,0	1/1:30,0:30:57.12:1090,57,0	1/1:20,0:20:47.96:859,48,0	1/1:18,0:18:23.90:357,24,0	1/1:10,12:28:12.04:243,12,0	1/1:25,0:24:51.17:1134,51,0	1/1:19,0:16:23.98:360,24,0	1/1:4,0:4:4.83:47,5,0
chr10	80102386	.	C	CTAT	338.11	PASS	AB=0.699;AC=11;AF=0.204;AN=54;BaseQRankSum=11.578;DP=398;FS=5.800;HRun=0;HaplotypeScore=85.6192;InbreedingCoeff=0.0015;MQ=69.47;MQ0=1;MQRankSum=-1.720;QD=2.68;ReadPosRankSum=3.530;VQSLOD=0.5312;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:24.08:0,24,432	0/0:7,0:7:21.07:0,21,361	0/1:6,0:5:18.98:19,0,72	0/1:6,0:5:2.84:3,0,48	0/0:21,0:21:63.19:0,63,1057	1/1:3,1:17:35.82:320,36,0	0/0:12,0:12:36.12:0,36,630	0/0:35,0:35:99:0,105,1787	0/0:12,0:13:39.11:0,39,646	0/0:23,0:23:63.21:0,63,1119	0/0:22,0:22:66.20:0,66,1149	0/1:5,0:12:18.38:18,0,158	0/1:6,0:14:11.97:12,0,139	0/1:4,0:8:9.44:9,0,88	0/0:18,0:18:51.16:0,51,867	0/0:13,0:13:33.11:0,33,615	0/0:19,0:19:54.18:0,54,932	0/0:13,0:13:36.12:0,36,640	0/0:6,0:6:18.06:0,18,305	0/0:17,0:17:51.17:0,51,874	0/0:12,0:13:36.08:0,36,554	0/0:4,0:7:4.26:0,4,116	0/1:4,0:9:5.33:5,0,106	./.	0/1:4,0:19:30.89:31,0,176	0/1:8,0:26:56.98:57,0,308	0/0:24,0:24:69.24:0,69,1247	0/1:2,0:9:6.51:7,0,33
chr10	80102769	.	TTC	T	7858.06	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=11.589;DP=712;FS=1.407;HRun=0;HaplotypeScore=98.6505;InbreedingCoeff=0.9716;MQ=80.92;MQ0=9;MQRankSum=0.559;QD=27.57;ReadPosRankSum=0.944;VQSLOD=6.2623;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,129,2118	1/1:0,5:5:15.05:188,15,0	0/0:52,0:41:37.19:0,37,916	0/0:52,0:35:48.78:0,49,742	1/1:3,33:36:93.17:1110,93,0	0/0:16,1:16:42.13:0,42,654	0/0:14,0:14:30.08:0,30,454	1/1:12,13:25:36.10:437,36,0	1/1:4,16:21:29.93:352,30,0	1/1:2,21:23:63.17:763,63,0	1/1:7,16:23:45.14:563,45,0	0/0:19,0:19:17.44:0,17,793	0/0:20,0:20:51.17:0,51,831	0/0:30,0:30:66.22:0,66,1077	1/1:3,21:24:48.13:585,48,0	1/1:3,27:30:69.22:863,69,0	0/0:25,1:26:31.70:0,32,1036	1/1:0,12:12:36.12:450,36,0	1/1:3,12:16:38.95:462,39,0	1/1:2,18:20:57.14:695,57,0	1/1:2,15:17:36.12:450,36,0	0/0:19,0:19:48.16:0,48,782	0/0:33,1:34:58.78:0,59,1433	0/0:34,0:34:90.31:0,90,1482	0/0:23,0:23:60.21:0,60,986	0/0:26,1:27:19.64:0,20,820	1/1:4,29:33:75.13:938,75,0	0/0:4,0:4:3.01:0,3,50
chr10	80104061	.	CA	C	6403.79	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=16.128;DP=519;FS=0.354;HRun=1;HaplotypeScore=88.6703;InbreedingCoeff=0.9984;MQ=93.02;MQ0=1;MQRankSum=-5.721;QD=39.29;ReadPosRankSum=2.330;VQSLOD=5.3698;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1722	0/0:7,0:7:21.07:0,21,336	0/0:24,0:24:67:0,67,1061	0/0:23,0:23:59.93:0,60,869	0/0:20,0:20:60.20:0,60,959	1/1:0,15:15:39.13:531,39,0	0/0:12,0:12:36.12:0,36,576	0/0:19,0:19:57.19:0,57,890	0/0:13,0:13:39.13:0,39,622	0/0:19,0:19:57.19:0,57,912	0/0:24,0:24:69.24:0,69,1103	1/1:0,9:9:27.09:376,27,0	1/1:1,16:17:51.16:694,51,0	1/1:1,25:26:78.23:1067,78,0	0/0:14,0:14:39.13:0,39,624	0/0:22,0:22:60.20:0,60,956	0/0:38,0:38:99:0,114,1823	0/0:17,0:17:45.15:0,45,719	0/0:11,0:11:33.11:0,33,528	0/0:28,0:28:84.26:0,84,1296	0/0:7,0:7:21.07:0,21,336	1/1:0,16:16:42.14:586,42,0	1/1:2,24:26:78.23:1054,78,0	1/1:0,14:14:36.12:502,36,0	1/1:0,13:13:39.13:544,39,0	1/1:0,16:16:48.11:632,48,0	0/0:22,0:22:66.19:0,66,1007	1/1:1,10:10:30.10:419,30,0
chr10	80104140	.	G	GC	9381.50	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-4.765;DP=530;FS=1.114;HRun=8;HaplotypeScore=72.1967;InbreedingCoeff=0.9427;MQ=72.59;MQ0=0;MQRankSum=-0.736;QD=29.78;ReadPosRankSum=1.747;VQSLOD=4.9586;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.03:0,69,631	1/1:1,10:11:27.08:311,27,0	0/0:19,0:19:16.73:0,17,208	0/0:9,0:8:1.18:0,1,33	1/1:4,25:29:64.87:820,65,0	0/0:14,0:14:41.95:0,42,371	0/0:20,0:20:57.01:0,57,516	1/1:5,29:34:87.01:929,87,0	1/1:0,6:6:15.04:173,15,0	1/1:0,7:7:21.06:242,21,0	1/1:2,23:27:66.18:751,66,0	1/1:1,18:19:51.15:586,51,0	1/1:3,18:21:57.10:641,57,0	1/1:7,20:27:72.15:796,72,0	1/1:1,20:21:57.15:646,57,0	1/1:2,18:20:48.14:554,48,0	0/0:25,0:25:62.99:0,63,566	1/1:0,13:14:35.94:393,36,0	0/0:17,1:18:10.41:0,10,350	0/0:15,0:15:42.01:0,42,380	0/0:11,0:11:32.99:0,33,292	1/1:1,21:22:57.17:654,57,0	1/1:2,21:23:66.20:762,66,0	1/1:1,11:12:36.02:396,36,0	1/1:1,21:22:63.19:727,63,0	0/0:24,1:25:31.42:0,31,542	0/0:30,0:30:74.97:0,75,674	0/0:2,0:2:6:0,6,55
chr10	80106605	.	CAT	C	8390.69	PASS	AB=0.782;AC=33;AF=0.589;AN=56;BaseQRankSum=8.716;DP=526;FS=3.946;HRun=0;HaplotypeScore=82.8501;InbreedingCoeff=0.6665;MQ=67.21;MQ0=1;MQRankSum=1.786;QD=23.50;ReadPosRankSum=1.336;VQSLOD=4.9280;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:71.57:0,72,1222	1/1:2,11:13:33.11:413,33,0	0/0:6,0:5:3.01:0,3,34	0/1:6,0:6:0:0,0,0	1/1:3,18:21:45.14:560,45,0	0/1:2,17:19:4.33:480,0,4	0/1:21,2:23:17.93:18,0,680	1/1:14,24:38:51.18:820,51,0	1/1:2,10:12:30.10:375,30,0	1/1:2,27:28:81.23:996,81,0	1/1:3,15:18:33.11:413,33,0	0/0:19,0:19:45.11:0,45,691	0/0:19,0:19:45.15:0,45,738	0/0:22,0:22:57.14:0,57,863	1/1:3,12:15:24.08:300,24,0	1/1:1,25:26:63.20:788,63,0	0/0:15,1:16:7.63:0,8,655	1/1:3,14:17:33.11:413,33,0	1/1:11,14:25:42.12:504,42,0	0/1:5,21:26:4.31:477,0,4	1/1:2,14:16:36.12:450,36,0	0/0:11,0:11:27.09:0,27,446	0/0:17,1:18:7.59:0,8,607	0/1:9,1:10:19.47:19,0,230	0/0:20,1:21:19.60:0,20,749	1/1:4,17:21:54.15:651,54,0	1/1:3,14:17:42.13:525,42,0	1/1:0,5:5:15.05:188,15,0
chr10	80109596	.	C	CCT	5604.35	PASS	AB=0.988;AC=27;AF=0.482;AN=56;BaseQRankSum=6.222;DP=670;FS=16.448;HRun=0;HaplotypeScore=134.9202;InbreedingCoeff=0.8792;MQ=64.07;MQ0=8;MQRankSum=-5.743;QD=16.34;ReadPosRankSum=-1.197;VQSLOD=3.2328;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:48.12:0,48,595	1/1:5,4:9:14.88:189,15,0	0/0:48,0:25:30.85:0,31,344	0/1:81,0:29:11.77:12,0,157	1/1:29,3:32:33.84:622,34,0	0/0:24,0:24:29.87:0,30,211	0/0:15,0:15:36.07:0,36,429	1/1:36,3:36:63.92:927,64,0	1/1:10,0:10:12.46:225,12,0	1/1:26,1:25:32.56:525,33,0	1/1:31,1:31:15.71:603,16,0	0/0:23,0:22:48.14:0,48,581	0/0:15,0:11:21.07:0,21,260	0/0:22,0:20:54.12:0,54,641	1/1:13,0:13:12.11:245,12,0	1/1:11,0:11:24.08:347,24,0	0/0:28,0:28:64.88:0,65,769	1/1:7,0:7:1.45:36,1,0	1/1:12,0:12:25.50:320,25,0	1/1:28,3:31:44.09:824,44,0	1/1:8,0:8:8.48:131,8,0	0/0:18,0:18:42.09:0,42,497	0/0:22,0:22:57.18:0,57,707	0/0:20,0:20:39.07:0,39,457	0/0:37,0:37:87.24:0,87,1051	0/0:23,0:20:34.33:0,34,274	1/1:27,2:29:29.16:598,29,0	0/0:12,0:12:17.77:0,18,93
chr10	80109610	.	T	TC	1244.15	PASS	AB=0.886;AC=13;AF=0.232;AN=56;BaseQRankSum=8.777;DP=724;FS=3.348;HRun=1;HaplotypeScore=151.1346;InbreedingCoeff=-0.0232;MQ=66.34;MQ0=14;MQRankSum=-3.126;QD=4.84;ReadPosRankSum=-1.104;VQSLOD=0.0379;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:55.03:0,55,734	1/1:5,2:7:10.31:87,10,0	0/0:71,0:29:65.06:0,65,712	0/0:109,0:35:40.16:0,40,463	0/1:30,3:33:99:166,0,187	0/0:23,0:23:47.81:0,48,445	0/0:17,0:17:48.16:0,48,655	0/1:40,0:34:61.18:130,0,61	0/1:11,2:13:44.53:45,0,84	0/1:15,8:21:99:176,0,106	0/1:28,3:30:99:239,0,154	0/0:21,0:20:60.15:0,60,794	0/0:14,0:11:30.10:0,30,412	0/0:23,0:21:60.15:0,60,796	0/1:16,2:17:55.25:55,0,104	0/1:10,2:12:2.29:83,0,2	0/0:32,0:32:84.44:0,84,1102	0/0:8,1:8:7.29:0,7,54	0/1:11,2:13:34.46:34,0,123	0/1:25,6:31:68.19:173,0,68	0/1:8,0:8:4.21:22,0,4	0/0:17,0:17:45.10:0,45,589	0/0:20,0:20:57.19:0,57,797	0/0:22,0:22:48.46:0,48,583	0/0:31,0:31:91.16:0,91,1232	0/0:24,0:21:49.10:0,49,489	0/1:23,5:28:99:190,0,112	0/0:13,0:13:23.89:0,24,197
chr10	80109611	.	T	TTCTC	5678.33	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=5.379;DP=722;FS=33.109;HRun=0;HaplotypeScore=168.1011;InbreedingCoeff=0.8409;MQ=66.18;MQ0=14;MQRankSum=-2.455;QD=13.08;ReadPosRankSum=-1.195;VQSLOD=2.7017;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:51.07:0,51,774	1/1:5,0:7:11.71:162,12,0	0/0:72,0:30:32.44:0,32,513	0/1:108,0:34:52.14:52,0,66	1/1:28,0:32:1.88:239,2,0	1/1:4,19:24:32.90:758,33,0	0/0:17,0:17:42.12:0,42,663	1/1:41,0:35:32.76:206,33,0	1/1:10,0:13:15.10:158,15,0	1/1:15,0:21:47.02:658,47,0	1/1:28,0:30:8.84:254,9,0	0/0:22,0:21:54.07:0,54,794	0/0:14,0:11:30.07:0,30,472	0/0:22,0:20:54.18:0,54,896	1/1:16,0:17:19.21:167,19,0	1/1:10,0:12:14.72:158,15,0	0/0:32,0:32:28.51:0,29,1167	1/1:9,0:9:6.82:92,7,0	1/1:11,0:13:26.80:282,27,0	1/1:24,0:30:39.95:546,40,0	1/1:8,0:8:2.92:24,3,0	0/0:16,0:16:39.12:0,39,637	0/0:20,0:20:57.18:0,57,935	0/0:21,0:21:21.63:0,22,548	0/0:30,0:30:78.22:0,78,1239	1/1:2,22:21:54.16:1093,54,0	1/1:22,0:27:28.55:376,29,0	1/1:2,11:13:18.06:453,18,0
chr10	80109705	.	ATCTT	A	7259.66	PASS	AB=0.919;AC=27;AF=0.482;AN=56;BaseQRankSum=8.661;DP=517;FS=1.797;HRun=0;HaplotypeScore=113.0774;InbreedingCoeff=0.8421;MQ=50.00;MQ0=0;MQRankSum=-4.619;QD=28.92;ReadPosRankSum=0.339;VQSLOD=4.5172;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:45.14:0,45,1045	1/1:0,6:6:18.06:304,18,0	0/1:16,0:8:0.91:1,0,113	0/1:13,0:9:5.72:6,0,71	1/1:4,19:23:51.11:826,51,0	0/0:21,0:16:30.09:0,30,673	0/0:15,0:15:33.06:0,33,692	0/1:17,8:20:1.90:34,0,2	1/1:3,14:17:42.14:709,42,0	1/1:5,18:23:54.17:887,54,0	1/1:8,9:17:26.75:429,27,0	0/0:17,0:15:36.11:0,36,842	0/0:23,0:16:45.14:0,45,1039	0/0:22,0:19:51.16:0,51,1220	1/1:1,14:15:42.14:708,42,0	1/1:5,7:12:23.93:379,24,0	0/0:38,0:38:90.23:0,90,1949	1/1:1,9:10:24.08:405,24,0	1/1:5,6:11:8.13:197,8,0	1/1:5,25:30:69.24:1165,69,0	1/1:3,8:11:10.31:198,10,0	0/0:14,0:13:23.90:0,24,597	0/0:16,0:10:30.10:0,30,747	0/0:25,0:24:46.60:0,47,1026	0/0:27,0:23:62.91:0,63,1418	0/0:19,0:14:28.79:0,29,780	1/1:2,20:22:60.21:1012,60,0	0/0:11,0:11:24.08:0,24,595
chr10	80109749	.	ACCTT	A	119.61	PASS	AB=0.876;AC=3;AF=0.056;AN=54;BaseQRankSum=9.206;DP=506;FS=2.119;HRun=0;HaplotypeScore=216.1531;InbreedingCoeff=-0.0728;MQ=41.60;MQ0=13;MQRankSum=-6.247;QD=4.12;ReadPosRankSum=1.000;VQSLOD=2.4089;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:47.22:0,47,1549	0/0:11,0:11:19.37:0,19,230	./.	0/1:12,0:3:36.40:41,0,36	0/0:22,0:22:32.27:0,32,438	0/0:20,0:15:9.42:0,9,192	0/0:11,0:11:33:0,33,704	0/0:31,0:20:10.54:0,11,436	0/0:14,0:14:31.91:0,32,340	0/0:26,0:25:36.73:0,37,521	0/0:17,0:16:2.15:0,2,140	0/0:22,0:20:48.39:0,48,423	0/0:22,0:15:22.44:0,22,348	0/0:20,0:17:40.84:0,41,376	0/0:15,0:15:37.56:0,38,334	0/0:11,0:11:4.95:0,5,151	0/0:33,0:31:64.14:0,64,2089	0/1:5,3:7:41.94:166,0,42	0/0:3,0:3:8.99:0,9,178	0/0:27,0:27:14.38:0,14,465	0/1:8,1:9:2.34:2,0,56	0/0:17,0:16:26.22:0,26,164	0/0:16,0:10:23.93:0,24,227	0/0:15,0:14:16.75:0,17,182	0/0:32,0:27:78.01:0,78,534	0/0:25,0:20:22.17:0,22,285	0/0:23,0:23:21.66:0,22,422	0/0:7,0:7:15.04:0,15,321
chr10	80109769	.	TCCCA	T	14484.73	PASS	AB=0.794;AC=43;AF=0.768;AN=56;BaseQRankSum=9.497;DP=461;FS=0.473;HRun=0;HaplotypeScore=155.0380;InbreedingCoeff=0.4349;MQ=37.97;MQ0=19;MQRankSum=-6.580;QD=39.36;ReadPosRankSum=-0.273;VQSLOD=5.0062;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:48.34:0,48,1680	1/1:0,10:10:27.98:529,28,0	0/0:18,0:1:2.97:0,3,20	0/1:21,0:8:24.60:25,0,89	1/1:3,18:21:57.37:849,57,0	1/1:7,12:14:36.11:662,36,0	0/0:12,0:12:36.12:0,36,960	1/1:6,17:19:56:1081,56,0	1/1:3,7:10:26.21:467,26,0	1/1:3,22:24:70.44:1327,70,0	1/1:1,15:16:45.15:860,45,0	1/1:2,15:15:39.13:785,39,0	1/1:8,14:15:41.42:758,41,0	1/1:8,8:13:21.07:428,21,0	1/1:0,8:7:21.07:386,21,0	1/1:2,10:12:25.33:472,25,0	0/0:35,0:34:95.24:0,95,2365	0/1:4,1:4:46.77:47,0,57	1/1:1,3:4:11.25:185,11,0	1/1:1,19:20:60.14:1076,60,0	0/1:5,2:7:39.75:205,0,40	1/1:0,13:12:30.10:591,30,0	1/1:6,9:9:27.08:511,27,0	0/1:7,3:9:99:122,0,156	1/1:4,26:25:75.23:1400,75,0	0/1:7,16:18:35.82:856,0,36	1/1:2,15:17:48.12:817,48,0	1/1:4,0:4:5.99:48,6,0
chr10	80109772	.	CA	C	821.40	PASS	AB=1.000;AC=32;AF=0.593;AN=54;BaseQRankSum=10.711;DP=446;FS=0.000;HRun=1;HaplotypeScore=178.4829;InbreedingCoeff=0.4172;MQ=35.88;MQ0=18;MQRankSum=-6.285;QD=2.62;ReadPosRankSum=1.056;VQSLOD=-0.4559;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:24:56.69:0,57,951	1/1:10,0:10:15.36:45,15,0	0/0:17,0:2:5.97:0,6,48	0/0:21,0:8:9.28:0,9,122	0/1:20,0:20:16.04:16,0,76	1/1:17,0:12:20.45:64,20,0	0/0:13,0:13:39.10:0,39,576	1/1:22,0:19:12.24:64,12,0	0/1:11,0:11:21.17:26,0,21	1/1:26,0:25:5.98:76,6,0	1/1:16,0:16:19.51:64,20,0	1/1:16,0:14:22.49:81,22,0	0/1:19,0:12:17.27:23,0,17	1/1:16,0:13:14.82:57,15,0	1/1:8,0:7:6.76:19,7,0	0/1:12,0:12:8.10:11,0,8	0/0:30,2:33:72.57:0,73,1395	0/0:5,0:4:4.18:0,4,99	0/1:4,0:4:3.90:4,0,12	1/1:20,0:20:18.38:113,18,0	0/0:5,1:6:2.49:0,2,47	1/1:13,0:12:15.47:57,15,0	1/1:13,0:7:17.35:70,17,0	0/0:10,0:9:5.62:0,6,95	1/1:33,0:28:30.71:119,31,0	0/1:21,0:16:14.94:64,0,15	1/1:16,0:16:0.64:31,1,0	./.
chr10	80109782	.	TCTTTCTTTCCAC	T	10014.02	PASS	AB=1.000;AC=33;AF=0.611;AN=54;BaseQRankSum=4.708;DP=481;FS=2.546;HRun=0;HaplotypeScore=241.6968;InbreedingCoeff=0.1972;MQ=37.34;MQ0=19;MQRankSum=-7.583;QD=27.59;ReadPosRankSum=-1.061;VQSLOD=3.6227;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:60.15:0,60,2856	1/1:10,0:10:24.08:562,24,0	0/0:20,0:2:6.02:0,6,252	0/0:25,0:13:26.10:0,26,1008	1/1:11,11:22:30.46:905,30,0	1/1:18,0:13:23.89:800,24,0	0/0:14,0:14:42.14:0,42,2032	1/1:20,0:19:24.82:530,25,0	1/1:13,0:13:11.24:386,11,0	1/1:27,0:25:44.85:1095,45,0	1/1:19,0:19:36.01:814,36,0	0/1:20,0:18:9.18:161,0,9	0/1:20,0:13:6.28:107,0,6	0/1:16,0:13:6.99:48,0,7	1/1:11,0:10:7.41:321,7,0	1/1:14,0:14:6.08:136,6,0	0/0:32,0:32:79.76:0,80,3839	0/1:7,0:6:77.62:78,0,144	0/1:7,0:7:1.21:119,0,1	1/1:10,13:23:41.34:1466,41,0	0/1:6,0:6:28.77:29,0,91	0/1:15,0:14:5.44:106,0,5	0/1:12,0:6:0.23:127,0,0	0/1:11,0:10:49.10:49,0,178	0/1:33,0:28:99:269,0,787	0/1:21,0:16:99:903,0,147	1/1:9,9:18:36.50:1003,37,0	./.
chr10	80109786	.	TCTTTCCAC	T	13556.16	PASS	AB=0.907;AC=39;AF=0.722;AN=54;BaseQRankSum=8.128;DP=480;FS=4.748;HRun=0;HaplotypeScore=195.9267;InbreedingCoeff=0.5134;MQ=36.65;MQ0=17;MQRankSum=-7.779;QD=37.14;ReadPosRankSum=-0.646;VQSLOD=4.4246;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:50.33:0,50,2105	1/1:3,5:8:23.75:520,24,0	0/0:20,0:3:9.03:0,9,325	0/0:24,0:13:19.56:0,20,902	1/1:27,0:27:55.59:1044,56,0	1/1:9,9:13:36.12:873,36,0	0/0:14,0:14:42.14:0,42,1557	1/1:18,0:17:33.84:585,34,0	1/1:11,3:14:25.99:528,26,0	1/1:15,10:23:55.90:1196,56,0	1/1:11,9:20:51.64:1035,52,0	1/1:19,0:17:40.27:746,40,0	1/1:22,0:15:31.17:607,31,0	1/1:16,0:13:15.05:304,15,0	1/1:9,2:10:12.15:370,12,0	1/1:13,0:13:21.96:412,22,0	0/0:32,0:32:63.95:0,64,2799	0/1:7,1:7:99:236,0,133	1/1:7,0:7:16.88:243,17,0	1/1:23,0:23:44.62:1295,45,0	0/1:5,0:5:77.85:78,0,108	1/1:13,1:13:24.81:564,25,0	1/1:11,1:6:14.86:332,15,0	0/1:11,0:10:99:103,0,154	0/1:34,0:29:85.90:580,0,86	0/1:9,11:15:87.64:903,0,88	1/1:20,0:20:46.38:1003,46,0	./.
chr10	80109790	.	TCCAC	T	14127.08	PASS	AB=0.829;AC=40;AF=0.741;AN=54;BaseQRankSum=10.719;DP=474;FS=13.453;HRun=0;HaplotypeScore=164.9913;InbreedingCoeff=0.5999;MQ=40.16;MQ0=16;MQRankSum=-8.608;QD=39.35;ReadPosRankSum=0.861;VQSLOD=4.6459;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:14.50:0,14,1386	1/1:5,3:8:24.01:420,24,0	0/0:20,0:6:18.06:0,18,496	0/0:25,0:14:20.25:0,20,776	1/1:17,7:24:55.13:953,55,0	1/1:14,3:12:36.12:694,36,0	0/0:16,0:16:48.16:0,48,1252	1/1:7,10:16:34.36:643,34,0	1/1:11,3:14:34.40:570,34,0	1/1:16,7:22:58.08:1105,58,0	1/1:11,10:21:55.03:970,55,0	1/1:4,14:16:47.81:797,48,0	1/1:5,16:14:34.83:639,35,0	1/1:1,16:14:15.05:290,15,0	1/1:7,4:10:24.48:403,24,0	1/1:2,10:12:21.07:404,21,0	0/0:31,0:31:36.49:0,36,1967	0/1:6,1:7:99:219,0,124	1/1:3,4:7:17.85:290,18,0	1/1:22,3:25:67.17:1239,67,0	0/1:6,0:6:71.06:150,0,71	1/1:4,8:11:33.11:635,33,0	1/1:2,11:7:14.49:291,14,0	0/1:5,6:10:70.61:112,0,71	1/1:27,8:30:90.27:1663,90,0	0/1:17,3:16:35.82:822,0,36	1/1:13,6:19:45.63:818,46,0	./.
chr10	80110640	.	C	CTCTGTGTGTG	13448.18	PASS	AB=0.888;AC=36;AF=0.643;AN=56;BaseQRankSum=-1.899;DP=565;FS=10.854;HRun=0;HaplotypeScore=181.4564;InbreedingCoeff=0.1896;MQ=60.76;MQ0=2;MQRankSum=-7.239;QD=30.56;ReadPosRankSum=-0.242;VQSLOD=3.8683;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:21:41.84:0,42,584	1/1:0,6:7:3.01:160,3,0	0/0:29,0:21:50.25:0,50,655	0/0:18,0:11:27:0,27,324	1/1:9,27:43:19.82:1033,20,0	0/1:17,0:23:99:208,0,175	0/0:15,0:15:42.05:0,42,1080	1/1:33,0:31:90.06:1673,90,0	1/1:6,13:23:23.47:1259,23,0	1/1:3,9:17:39.02:1042,39,0	1/1:2,7:16:18.06:858,18,0	0/1:14,0:16:99:203,0,110	0/1:14,0:14:45.30:339,0,45	0/1:19,0:20:99:237,0,135	1/1:3,17:22:21.07:1047,21,0	1/1:2,8:14:15.05:743,15,0	0/0:37,0:42:39.12:0,39,2548	1/1:15,0:15:29.86:488,30,0	1/1:1,6:8:23.97:334,24,0	1/1:5,10:17:15.05:711,15,0	1/1:7,0:7:8.53:311,9,0	0/1:10,0:15:30.88:325,0,31	0/1:19,0:18:59.82:87,0,60	0/1:13,0:16:17.94:107,0,18	0/1:25,0:22:93.42:93,0,211	0/1:14,0:22:99:830,0,109	1/1:6,14:24:26.24:1337,26,0	0/1:20,0:20:22.72:23,0,236
chr10	80110650	.	G	GTGTGTGTGTGTGTGTG	10002	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=4.443;DP=517;FS=6.891;HRun=0;HaplotypeScore=218.3498;InbreedingCoeff=0.5594;MQ=48.44;MQ0=3;MQRankSum=-6.731;QD=22.53;ReadPosRankSum=-0.158;VQSLOD=3.0686;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:15.04:0,15,458	1/1:7,0:7:3.01:81,3,0	0/0:26,0:12:9.03:0,9,206	0/0:15,0:8:3.01:0,3,117	1/1:34,0:33:20.52:509,21,0	1/1:19,0:19:10.85:151,11,0	0/0:13,0:13:33.09:0,33,1284	1/1:30,0:28:33.09:824,33,0	1/1:16,0:16:24.08:650,24,0	1/1:16,0:16:36.04:745,36,0	1/1:20,0:20:18.06:411,18,0	1/1:14,0:13:6.02:396,6,0	1/1:15,0:15:18.53:529,19,0	1/1:19,0:18:8.99:342,9,0	1/1:18,0:18:21.07:554,21,0	1/1:12,0:12:15.05:366,15,0	0/1:41,0:40:27.58:28,0,3010	1/1:14,0:14:9.03:197,9,0	1/1:7,0:6:3.01:79,3,0	1/1:18,0:18:15.05:398,15,0	1/1:8,0:8:5.89:103,6,0	1/1:18,0:18:8.53:679,9,0	1/1:17,2:21:3.01:199,3,0	1/1:18,0:18:12.04:742,12,0	1/1:19,0:16:9.03:193,9,0	1/1:19,0:19:42.14:1028,42,0	1/1:25,0:25:26.97:711,27,0	1/1:15,0:15:3.85:89,4,0
chr10	80110858	.	TA	T	10310.08	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=2.272;DP=531;FS=37.853;HRun=8;HaplotypeScore=59.9253;InbreedingCoeff=0.9527;MQ=80.36;MQ0=1;MQRankSum=-0.979;QD=23.01;ReadPosRankSum=5.346;VQSLOD=2.7809;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:30:0,30,315	1/1:0,8:8:23.94:212,24,0	0/0:26,1:23:33.59:0,34,263	0/0:8,0:6:7.74:0,8,46	1/1:2,36:38:92.98:871,93,0	1/1:6,18:24:49.39:576,49,0	0/0:7,0:7:18.05:0,18,206	1/1:8,25:33:72.10:689,72,0	1/1:0,12:12:33.05:318,33,0	1/1:2,19:21:57.06:542,57,0	1/1:4,25:29:72.05:685,72,0	1/1:2,18:20:39.06:376,39,0	1/1:1,16:17:30.05:289,30,0	1/1:0,14:14:36.06:347,36,0	1/1:0,17:17:48.08:463,48,0	1/1:1,15:16:39.06:376,39,0	0/0:28,1:28:49.76:0,50,848	1/1:3,9:12:18.03:173,18,0	1/1:1,8:9:24.02:225,24,0	1/1:2,26:28:75.08:714,75,0	1/1:2,18:20:42.07:405,42,0	1/1:0,8:8:23.99:222,24,0	1/1:0,20:20:53.95:510,54,0	1/1:1,20:21:42.07:405,42,0	1/1:2,21:23:57.09:549,57,0	1/1:1,21:22:62.97:582,63,0	1/1:1,30:31:74.13:721,74,0	1/1:1,4:5:6.01:58,6,0
chr10	80112718	.	ATGTTT	A	13309.43	PASS	AB=0.750;AC=45;AF=0.804;AN=56;BaseQRankSum=9.861;DP=752;FS=0.459;HRun=0;HaplotypeScore=208.9632;InbreedingCoeff=0.7951;MQ=63.67;MQ0=9;MQRankSum=-7.767;QD=24.16;ReadPosRankSum=3.164;VQSLOD=4.0939;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:92.13:0,92,2286	1/1:4,2:6:6.02:112,6,0	0/0:55,0:32:37.01:0,37,702	0/0:61,0:24:6.56:0,7,353	1/1:10,23:32:57.07:766,57,0	1/1:10,25:35:51.88:915,52,0	0/0:18,0:18:42.14:0,42,1029	1/1:18,7:25:21.03:288,21,0	1/1:7,18:25:8.92:484,9,0	1/1:9,22:31:63.19:1093,63,0	1/1:2,18:20:48.01:720,48,0	1/1:14,19:33:42.14:731,42,0	1/1:13,21:34:45.15:838,45,0	1/1:8,11:19:18.06:300,18,0	1/1:8,20:28:42.14:747,42,0	1/1:7,19:26:39.13:695,39,0	0/0:22,0:22:48.16:0,48,1185	0/1:8,4:12:64.70:85,0,65	1/1:10,10:20:27.04:424,27,0	1/1:3,12:14:33.03:493,33,0	1/1:9,6:15:6.02:112,6,0	1/1:10,13:23:33.11:524,33,0	1/1:11,15:26:33.04:557,33,0	1/1:10,14:24:14.17:259,14,0	1/1:7,29:36:69.23:1217,69,0	1/1:5,26:31:78.20:1331,78,0	1/1:4,20:24:24.08:449,24,0	1/1:7,3:10:9.03:168,9,0
chr10	80113701	.	T	TA	3876.49	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-10.919;DP=504;FS=0.401;HRun=6;HaplotypeScore=50.4576;InbreedingCoeff=0.9123;MQ=72.60;MQ0=0;MQRankSum=0.146;QD=30.52;ReadPosRankSum=2.498;VQSLOD=4.1047;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:36.08:0,36,367	0/0:8,0:8:21.05:0,21,214	0/0:15,0:14:36.07:0,36,358	0/0:7,0:7:14.93:0,15,138	0/0:30,0:30:87.17:0,87,873	0/0:24,0:24:66.13:0,66,668	0/0:12,0:12:33.06:0,33,329	0/0:41,0:41:93.18:0,93,938	0/0:16,0:16:45.10:0,45,459	0/0:22,0:22:63.11:0,63,624	0/0:30,0:30:84.15:0,84,842	1/1:1,21:22:60.19:755,60,0	1/1:2,20:22:60.16:738,60,0	1/1:4,12:16:36.12:453,36,0	0/0:16,0:16:42.09:0,42,429	0/0:22,0:22:60.12:0,60,606	0/0:16,0:16:36.05:0,36,358	0/1:6,0:6:5.79:6,0,76	0/0:15,0:15:45.10:0,45,459	0/0:23,0:23:63.10:0,63,627	0/0:7,0:7:21.05:0,21,214	1/1:0,19:19:54.17:679,54,0	1/1:2,15:17:45.14:566,45,0	1/1:2,3:5:9.03:113,9,0	1/1:3,17:20:45.14:566,45,0	0/0:19,0:19:57.13:0,57,582	0/0:30,0:30:81.15:0,81,811	0/0:11,0:11:33.05:0,33,328
chr10	80114247	.	A	ATT	2108.94	PASS	AB=0.605;AC=5;AF=0.089;AN=56;BaseQRankSum=3.315;DP=501;FS=21.799;HRun=8;HaplotypeScore=94.2308;InbreedingCoeff=0.7221;MQ=76.34;MQ0=0;MQRankSum=-0.832;QD=35.74;ReadPosRankSum=1.552;VQSLOD=2.4149;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:63.16:0,63,702	0/0:8,0:8:21.04:0,21,225	0/0:13,0:14:8.95:0,9,192	0/0:7,0:7:5.76:0,6,47	0/0:24,0:24:60.12:0,60,659	1/1:0,20:20:60.16:924,60,0	0/0:15,0:15:36.07:0,36,401	0/0:41,0:41:99:0,111,1216	0/0:14,0:14:39.09:0,39,434	0/0:13,0:13:39.11:0,39,433	0/0:17,0:17:48.09:0,48,521	0/0:20,0:20:48.10:0,48,526	0/0:17,0:17:45.11:0,45,493	0/0:10,0:10:30.07:0,30,324	0/0:17,0:17:36.06:0,36,401	0/0:17,0:17:42.10:0,42,468	0/0:11,0:11:27.06:0,27,301	0/0:16,0:16:42.02:0,42,442	0/0:23,0:23:66.15:0,66,720	0/0:29,0:29:81.17:0,81,881	0/0:8,0:8:21.03:0,21,224	0/0:12,0:12:33.09:0,33,366	0/0:26,0:26:60.14:0,60,669	0/0:13,0:13:36.10:0,36,401	0/0:20,0:20:48.12:0,48,535	0/1:9,16:25:37.17:746,0,37	0/0:25,0:25:69.16:0,69,759	1/1:1,12:13:36.12:568,36,0
chr10	80115770	.	A	AC	10801.92	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-9.352;DP=491;FS=0.349;HRun=3;HaplotypeScore=47.4279;InbreedingCoeff=0.9698;MQ=84.01;MQ0=0;MQRankSum=-2.253;QD=36.62;ReadPosRankSum=2.959;VQSLOD=5.0925;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39.12:0,39,467	1/1:0,7:7:18.06:252,18,0	0/0:14,0:14:35.41:0,35,347	0/0:16,0:16:42.13:0,42,500	1/1:0,28:28:75.25:1035,75,0	1/1:2,25:27:72.24:1008,72,0	0/0:19,0:19:51.16:0,51,612	1/1:5,34:39:99:1424,102,0	1/1:1,17:18:45.15:630,45,0	1/1:0,12:12:33.11:462,33,0	1/1:0,11:11:33.11:462,33,0	0/0:17,0:17:51.14:0,51,600	0/0:18,0:18:51.14:0,51,601	0/0:16,0:16:45.12:0,45,527	1/1:0,22:22:60.20:840,60,0	1/1:1,19:20:39.13:546,39,0	0/0:10,0:10:24.07:0,24,288	1/1:0,4:4:12.04:168,12,0	1/1:2,12:14:36.12:502,36,0	1/1:1,20:21:54.18:756,54,0	1/1:1,21:22:57.19:798,57,0	0/0:11,0:11:27.08:0,27,324	0/0:20,0:20:57.17:0,57,683	0/0:19,0:19:57.17:0,57,684	0/0:22,0:22:63.16:0,63,741	1/1:2,19:21:60.20:827,60,0	1/1:1,25:26:75.25:1050,75,0	1/1:2,1:3:3.01:42,3,0
chr10	80116202	.	GGAGA	G	438.76	PASS	AB=0.843;AC=12;AF=0.231;AN=52;BaseQRankSum=0.164;DP=503;FS=3.596;HRun=0;HaplotypeScore=95.6351;InbreedingCoeff=0.2066;MQ=61.72;MQ0=11;MQRankSum=0.482;QD=3.07;ReadPosRankSum=1.109;VQSLOD=1.5199;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:14.98:0,15,187	0/0:4,0:4:0:0,0,0	./.	./.	0/0:20,0:20:6.02:0,6,104	0/0:23,0:23:3.01:0,3,56	0/0:8,0:8:2.97:0,3,20	0/0:45,0:45:13.75:0,14,107	0/0:5,0:11:3.01:0,3,52	0/0:16,0:16:27.09:0,27,523	0/0:13,0:13:9.03:0,9,156	0/1:16,1:19:51.89:74,0,52	0/1:10,2:13:55.54:66,0,56	0/1:21,1:28:58.28:92,0,58	0/0:24,0:24:12.50:0,12,220	0/0:14,0:14:9:0,9,116	0/1:15,1:16:34.21:37,0,34	0/0:5,0:9:5.93:0,6,69	0/0:14,0:14:12:0,12,162	0/0:17,0:17:3:0,3,25	0/0:11,0:11:6.02:0,6,124	1/1:12,0:11:0.41:1,0,0	0/0:11,0:11:0:0,0,0	1/1:15,6:21:18.05:256,18,0	0/0:14,0:14:6.02:0,6,124	1/1:19,0:19:0.21:20,0,0	0/0:24,0:23:29.10:0,29,500	1/1:12,0:10:3:25,3,0
chr10	80116251	.	G	GAGAGAG	1439.23	PASS	AB=1.000;AC=32;AF=0.615;AN=52;BaseQRankSum=-4.393;DP=480;FS=2.348;HRun=0;HaplotypeScore=113.6304;InbreedingCoeff=0.5328;MQ=68.63;MQ0=11;MQRankSum=-1.239;QD=4.11;ReadPosRankSum=-3.642;VQSLOD=0.8396;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:8.73:60,9,0	0/1:7,0:7:0:0,0,0	./.	0/1:23,0:13:0:0,0,0	1/1:27,0:27:3.01:81,3,0	1/1:32,0:31:2.99:23,3,0	0/1:11,0:10:0:0,0,0	1/1:35,0:33:5.48:29,5,0	1/1:13,0:13:2.86:95,3,0	1/1:14,0:14:18:248,18,0	1/1:16,0:16:6.02:131,6,0	0/0:15,0:15:12.03:0,12,150	0/0:16,0:15:3.01:0,3,42	0/0:15,0:15:12.04:0,12,173	1/1:22,3:28:11.97:98,12,0	1/1:17,0:17:6:108,6,0	0/0:15,0:15:8.46:0,8,102	1/1:9,0:9:3.67:30,4,0	1/1:22,0:21:8.99:144,9,0	0/1:19,0:19:0.32:0,0,0	./.	1/1:11,0:11:3:25,3,0	0/1:8,0:8:0:1,0,0	0/0:15,0:13:17.65:0,18,219	0/0:14,0:14:3.88:0,4,62	0/0:10,0:9:1.25:0,1,3	1/1:31,0:30:30.05:509,30,0	0/1:6,0:6:0:0,0,0
chr10	80117938	.	CTATGATCTA	C	8262.83	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.261;DP=617;FS=3.055;HRun=0;HaplotypeScore=173.3863;InbreedingCoeff=0.9908;MQ=78.04;MQ0=0;MQRankSum=-13.730;QD=76.51;ReadPosRankSum=3.091;VQSLOD=5.1445;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:36.08:0,36,1417	0/0:10,0:10:30.10:0,30,1398	0/0:15,0:15:39.10:0,39,1533	0/0:20,0:20:60.17:0,60,2251	0/0:34,0:34:99:0,99,4583	1/1:2,27:29:75.26:2368,75,0	0/0:21,0:21:63.22:0,63,2834	0/0:26,0:26:78.27:0,78,3617	0/0:17,0:17:48.16:0,48,2269	0/0:29,0:29:87.28:0,87,3840	0/0:19,0:19:57.18:0,57,2367	0/0:20,0:20:57.20:0,57,2665	1/1:1,24:25:60.21:1855,60,0	0/0:25,0:25:75.26:0,75,3557	0/0:16,0:16:48.16:0,48,2335	0/0:26,0:26:75.26:0,75,3606	0/0:25,0:25:72.25:0,72,3359	0/0:5,0:5:12.04:0,12,595	0/0:25,0:25:72.25:0,72,3411	0/0:23,0:23:69.24:0,69,3321	0/0:14,0:14:42.14:0,42,1969	0/0:24,0:24:63.20:0,63,2772	0/0:31,0:31:93.32:0,93,4312	0/0:28,0:28:78.27:0,78,3509	1/1:3,21:24:57.19:1702,57,0	1/1:2,22:24:63.20:1769,63,0	0/0:41,0:41:99:0,123,5522	1/1:0,6:6:18.06:569,18,0
chr10	80118571	.	T	TC	8822.37	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-14.899;DP=691;FS=0.307;HRun=7;HaplotypeScore=68.3089;InbreedingCoeff=0.9771;MQ=82.60;MQ0=0;MQRankSum=-7.341;QD=27.06;ReadPosRankSum=0.516;VQSLOD=5.4450;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.13:0,87,839	1/1:3,6:9:21.01:229,21,0	0/0:37,0:37:92.85:0,93,860	0/0:28,0:28:68.02:0,68,648	1/1:2,27:29:71.86:853,72,0	0/0:39,0:39:99:0,108,1043	0/0:24,0:24:63.09:0,63,608	1/1:4,19:23:57.10:644,57,0	1/1:2,13:15:33.10:398,33,0	1/1:3,15:18:45.14:542,45,0	1/1:1,17:18:51.16:615,51,0	0/0:39,0:39:84.11:0,84,810	1/1:3,39:42:99:1338,111,0	0/0:30,0:30:78.11:0,78,751	1/1:2,27:29:54.16:652,54,0	0/0:29,0:29:75.11:0,75,724	0/0:16,0:16:45.07:0,45,434	1/1:2,4:6:9.03:109,9,0	1/1:9,15:24:48.15:578,48,0	1/1:4,20:24:51.07:581,51,0	1/1:3,31:34:66.20:797,66,0	0/0:23,0:23:57.08:0,57,550	0/0:16,0:16:45.06:0,45,429	0/0:23,0:23:54.08:0,54,522	1/1:4,16:20:39.12:471,39,0	0/0:26,0:26:69.10:0,69,666	1/1:3,32:35:84.23:1014,84,0	0/0:2,0:2:6.01:0,6,58
chr10	80120582	.	GTA	G	12301.44	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=12.786;DP=551;FS=0.313;HRun=0;HaplotypeScore=99.2685;InbreedingCoeff=0.9733;MQ=76.38;MQ0=2;MQRankSum=-8.232;QD=44.41;ReadPosRankSum=-1.429;VQSLOD=5.6776;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.29:0,84,1682	1/1:0,8:8:24.08:389,24,0	0/0:17,0:17:45.03:0,45,799	0/0:12,0:12:33.03:0,33,604	1/1:3,27:30:87.28:1366,87,0	0/0:26,0:26:60.15:0,60,1141	0/0:16,0:16:46.71:0,47,917	1/1:2,18:20:60.19:932,60,0	1/1:2,17:19:57.18:900,57,0	1/1:0,21:21:63.22:1024,63,0	1/1:0,26:27:75.26:1214,75,0	0/0:27,0:27:81.24:0,81,1525	1/1:2,16:18:54.10:812,54,0	0/0:17,0:17:51.16:0,51,982	1/1:2,21:23:69.23:1097,69,0	0/0:24,1:25:26.35:0,26,1340	0/0:19,0:19:57.18:0,57,1097	1/1:1,9:10:27.06:411,27,0	1/1:2,18:20:60.15:926,60,0	1/1:3,23:26:78.24:1188,78,0	1/1:7,5:12:15.02:174,15,0	0/0:19,0:19:57.14:0,57,1078	0/0:25,0:25:75.24:0,75,1459	0/0:10,0:10:30.10:0,30,608	1/1:1,17:18:54.17:853,54,0	0/0:28,0:28:56.49:0,56,1583	1/1:1,24:23:63.21:1016,63,0	0/0:4,0:4:3.01:0,3,61
chr10	80120608	.	CT	C	6490.35	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=14.968;DP=528;FS=3.890;HRun=10;HaplotypeScore=119.1595;InbreedingCoeff=0.9590;MQ=72.21;MQ0=0;MQRankSum=-7.968;QD=19.85;ReadPosRankSum=-2.938;VQSLOD=3.3022;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:59.98:0,60,633	1/1:1,5:6:15:130,15,0	0/0:12,0:12:21.04:0,21,217	0/0:14,0:14:7.24:0,7,252	1/1:5,19:24:53.93:461,54,0	1/1:2,20:25:51.10:409,51,0	0/0:18,0:18:45.12:0,45,494	1/1:4,18:22:49.53:437,50,0	1/1:5,15:20:44.98:390,45,0	1/1:5,11:16:41.99:365,42,0	1/1:6,13:20:44.01:370,44,0	0/0:22,0:22:46.24:0,46,585	1/1:3,15:18:50.97:438,51,0	0/0:16,0:16:39.11:0,39,431	1/1:5,12:17:38.96:335,39,0	0/0:17,1:19:18.90:0,19,420	0/0:21,0:21:57.12:0,57,618	1/1:3,12:15:32.99:286,33,0	1/1:6,16:22:53.96:462,54,0	1/1:5,20:25:26.84:461,27,0	1/1:0,15:15:32.99:286,33,0	0/0:17,0:17:45.12:0,45,498	0/0:22,0:22:54.14:0,54,590	0/0:12,0:12:27.07:0,27,299	1/1:6,15:21:47.98:416,48,0	1/1:4,19:23:53.97:469,54,0	1/1:4,30:34:86.95:750,87,0	1/1:0,4:4:3:26,3,0
chr10	80121309	.	TTA	T	593.96	PASS	AB=1.000;AC=20;AF=0.500;AN=40;BaseQRankSum=2.933;DP=102;FS=0.000;HRun=0;HaplotypeScore=22.5067;InbreedingCoeff=0.4257;MQ=79.45;MQ0=1;MQRankSum=-1.218;QD=10.80;ReadPosRankSum=-1.561;VQSLOD=2.2030;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:21.07:0,21,341	./.	0/0:4,0:4:5.61:0,6,61	0/1:11,0:6:12.57:13,0,61	1/1:5,0:5:3:25,3,0	0/0:1,0:1:3.01:0,3,50	0/0:3,0:3:6:0,6,70	1/1:4,6:10:18.06:221,18,0	./.	1/1:1,3:4:9.03:113,9,0	./.	./.	1/1:1,0:1:3.01:39,3,0	0/0:3,0:3:6.02:0,6,102	./.	./.	0/0:10,0:10:22.59:0,23,307	1/1:3,0:3:5.97:56,6,0	1/1:4,0:4:3.01:39,3,0	1/1:5,0:5:12.02:140,12,0	1/1:3,0:3:2.99:24,3,0	0/0:2,0:2:3.01:0,3,47	0/0:3,0:3:9.03:0,9,145	0/0:1,0:1:3.01:0,3,51	./.	0/1:7,0:7:29.85:30,0,43	1/1:2,0:2:3.01:39,3,0	./.
chr10	80121763	.	AT	A	6841.18	PASS	AB=0.923;AC=35;AF=0.625;AN=56;BaseQRankSum=15.858;DP=637;FS=1.885;HRun=11;HaplotypeScore=94.4203;InbreedingCoeff=0.9389;MQ=73.01;MQ0=4;MQRankSum=-4.038;QD=17.32;ReadPosRankSum=0.679;VQSLOD=5.4308;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,99,1028	1/1:0,7:7:20.98:172,21,0	0/1:11,0:11:4.03:4,0,98	0/0:20,0:17:21.01:0,21,172	1/1:3,35:38:95.80:787,96,0	1/1:5,0:20:28.51:82,29,0	0/0:21,0:21:26.31:0,26,429	1/1:9,29:32:77.74:619,78,0	1/1:7,18:25:53.86:443,54,0	1/1:7,9:15:26.75:219,27,0	1/1:2,17:19:50.93:418,51,0	0/0:20,0:20:60.07:0,60,615	1/1:2,19:21:53.90:443,54,0	0/0:24,0:24:35.63:0,36,568	1/1:2,34:36:95.83:787,96,0	0/0:30,0:32:78.03:0,78,813	0/0:22,0:22:66.17:0,66,702	1/1:1,12:13:35.96:295,36,0	1/1:5,26:28:68.76:560,69,0	1/1:4,23:26:65.85:541,66,0	1/1:2,15:17:44.89:369,45,0	0/0:25,0:25:63.07:0,63,646	0/0:20,0:20:51.10:0,51,522	0/0:20,0:20:51.12:0,51,537	1/1:0,17:17:47.95:394,48,0	1/1:5,0:24:28.75:84,29,0	1/1:4,24:28:71.85:590,72,0	1/1:1,0:6:11.43:33,11,0
chr10	80124328	.	AG	A	10639.94	PASS	AB=0.929;AC=25;AF=0.446;AN=56;BaseQRankSum=14.623;DP=556;FS=7.262;HRun=1;HaplotypeScore=53.2802;InbreedingCoeff=0.9413;MQ=84.89;MQ0=0;MQRankSum=-2.703;QD=35.82;ReadPosRankSum=0.811;VQSLOD=4.4650;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.18:0,54,863	1/1:0,8:8:21.07:294,21,0	0/0:17,0:17:51.17:0,51,794	0/0:17,0:17:45.15:0,45,718	1/1:0,33:33:90.30:1259,90,0	0/0:12,0:12:36.12:0,36,575	0/0:22,0:22:66.23:0,66,1053	1/1:0,31:31:93.28:1264,93,0	1/1:0,20:20:60.20:839,60,0	1/1:0,30:30:90.26:1237,90,0	1/1:0,21:21:63.21:881,63,0	0/0:14,0:14:42.14:0,42,672	0/0:21,0:21:63.21:0,63,1004	0/0:16,0:16:48.16:0,48,767	1/1:0,32:32:84.28:1175,84,0	0/0:16,0:16:48.16:0,48,767	0/0:19,0:19:54.18:0,54,863	1/1:1,21:22:18.25:833,18,0	1/1:0,14:14:42.14:587,42,0	1/1:0,24:24:63.21:881,63,0	1/1:0,11:11:27.09:378,27,0	0/0:16,0:16:48.16:0,48,762	0/0:23,0:23:69.24:0,69,1103	0/0:14,0:14:42.14:0,42,671	0/0:18,0:18:54.18:0,54,863	0/1:24,2:26:5.66:6,0,1073	1/1:0,25:25:72.24:1007,72,0	0/0:15,0:15:45.15:0,45,719
chr10	80125873	.	C	CAAA	4348.81	PASS	AB=0.750;AC=32;AF=0.593;AN=54;BaseQRankSum=3.453;DP=447;FS=5.629;HRun=15;HaplotypeScore=82.9538;InbreedingCoeff=0.6925;MQ=60.33;MQ0=10;MQRankSum=-2.028;QD=14.40;ReadPosRankSum=-3.827;VQSLOD=2.3314;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:29:59.80:0,60,614	1/1:5,1:11:15.01:174,15,0	0/0:13,0:10:3.45:0,3,99	0/1:10,0:5:5.47:5,0,25	1/1:9,8:19:40.15:581,40,0	1/1:9,1:17:7.21:73,7,0	0/0:12,0:14:17.40:0,17,160	1/1:9,2:18:36.40:349,36,0	1/1:9,2:13:23.89:261,24,0	1/1:8,4:16:29.57:396,30,0	1/1:6,7:16:20.99:257,21,0	0/1:13,0:13:5.47:5,0,128	0/1:7,1:21:14.59:71,0,15	0/0:13,0:14:20.50:0,21,210	1/1:3,0:20:32.89:252,33,0	0/0:7,0:12:14.50:0,15,146	0/0:19,0:20:44.57:0,45,416	1/1:7,2:15:12:147,12,0	1/1:11,1:13:26.85:291,27,0	1/1:12,9:25:58.39:831,58,0	1/1:5,2:11:13.27:170,13,0	0/0:10,0:10:11.55:0,12,116	0/0:16,0:18:40.12:0,40,385	0/0:12,0:12:20.85:0,21,206	0/1:3,0:19:2.05:92,0,2	1/1:7,6:18:25.22:276,25,0	1/1:7,9:17:9.01:116,9,0	./.
chr10	80125974	.	CTTT	C	6175.14	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=7.080;DP=434;FS=2.011;HRun=12;HaplotypeScore=93.1876;InbreedingCoeff=0.9181;MQ=64.81;MQ0=3;MQRankSum=-7.427;QD=28.72;ReadPosRankSum=1.673;VQSLOD=4.4490;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:24:53.85:0,54,441	1/1:2,8:10:24.06:303,24,0	0/0:29,0:15:30.64:0,31,364	0/0:25,0:9:9.03:0,9,117	1/1:1,18:18:38.98:471,39,0	1/1:3,16:19:42.11:531,42,0	0/0:8,0:8:18.06:0,18,340	1/1:1,11:12:33.10:416,33,0	1/1:0,9:9:24.08:303,24,0	1/1:3,17:20:48.12:595,48,0	1/1:5,20:25:54.12:682,54,0	0/0:15,0:15:33.11:0,33,637	0/0:2,0:15:12.46:0,12,27	0/0:18,0:18:42.14:0,42,799	1/1:0,17:17:42.13:530,42,0	0/0:18,0:19:56.94:0,57,961	0/0:15,0:15:37.32:0,37,639	1/1:2,5:7:12.03:151,12,0	1/1:2,3:4:5.94:62,6,0	1/1:3,28:30:78.21:978,78,0	1/1:3,0:3:2.93:18,3,0	0/0:3,0:3:3.01:0,3,59	0/0:15,0:15:45.13:0,45,805	0/0:8,0:10:24.04:0,24,399	0/0:4,0:22:25.94:0,26,97	1/1:2,11:13:33.09:417,33,0	1/1:1,18:19:39.11:493,39,0	1/1:0,6:6:18.06:226,18,0
chr10	80126352	.	T	TTTTG	2561.52	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=12.403;DP=642;FS=1.982;HRun=0;HaplotypeScore=127.4613;InbreedingCoeff=-0.1218;MQ=60.29;MQ0=1;MQRankSum=-10.194;QD=9.42;ReadPosRankSum=-2.734;VQSLOD=2.4519;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:60.56:0,61,897	0/1:8,0:8:57.26:57,0,161	0/0:17,0:13:12.04:0,12,177	0/0:16,0:13:9:0,9,118	0/1:32,0:32:99:102,0,194	0/0:32,0:32:66.20:0,66,1022	0/0:26,0:26:44.88:0,45,667	0/1:44,0:43:83.92:84,0,468	0/1:13,0:13:48.65:129,0,49	0/1:20,0:20:99:133,0,135	0/1:18,0:18:79.45:79,0,96	0/0:24,0:24:51.17:0,51,803	1/1:12,13:26:63.21:1433,63,0	0/0:21,0:21:45.12:0,45,682	0/1:34,0:34:99:344,0,179	0/0:23,0:23:51.14:0,51,757	0/0:22,0:22:48.15:0,48,751	0/1:12,0:12:53.56:54,0,212	0/0:25,0:25:1.52:0,2,320	0/1:24,0:24:99:149,0,211	0/1:15,0:15:9.49:9,0,216	0/0:20,0:20:39.11:0,39,568	0/0:19,0:19:39.08:0,39,601	0/0:26,0:26:60.17:0,60,904	0/0:33,0:33:75.22:0,75,1169	0/0:17,0:17:39.12:0,39,583	0/1:26,0:25:99:145,0,269	0/0:19,0:19:36.12:0,36,583
chr10	80126384	.	G	GTTTTTGT	12006.94	PASS	AB=0.536;AC=28;AF=0.500;AN=56;BaseQRankSum=-8.575;DP=649;FS=1.979;HRun=0;HaplotypeScore=135.3669;InbreedingCoeff=0.8204;MQ=62.27;MQ0=1;MQRankSum=-5.320;QD=32.02;ReadPosRankSum=-4.798;VQSLOD=3.6728;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:63.17:0,63,1309	1/1:5,0:8:18:405,18,0	0/0:17,0:11:29.71:0,30,354	0/0:14,0:9:5.01:0,5,114	1/1:2,25:30:20.24:938,20,0	0/0:3,0:29:32.10:0,32,515	0/0:16,0:16:42.11:0,42,839	1/1:14,0:32:77.82:1237,78,0	1/1:2,12:14:18.06:680,18,0	1/1:3,22:28:56.88:1316,57,0	1/1:2,15:19:21.06:532,21,0	0/0:21,0:21:60.20:0,60,1375	1/1:8,0:31:41.61:1081,42,0	0/0:25,0:25:72.20:0,72,1474	1/1:4,34:39:48.16:1728,48,0	0/0:23,0:23:66.17:0,66,1306	0/0:27,0:27:21.17:0,21,1084	1/1:6,4:11:19.31:561,19,0	1/1:10,20:30:62.23:1175,62,0	1/1:2,21:26:33.11:983,33,0	1/1:2,5:9:6.02:193,6,0	0/0:18,0:18:45.11:0,45,902	0/0:20,0:20:54.13:0,54,1085	0/0:25,0:26:39.67:0,40,1513	0/1:6,0:41:99:120,0,597	0/1:3,0:24:99:152,0,259	1/1:5,23:32:24.08:906,24,0	0/0:0,0:11:33.04:0,33,309
chr10	80126935	.	A	AT	9942.39	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=9.796;DP=515;FS=1.886;HRun=3;HaplotypeScore=86.3983;InbreedingCoeff=0.9971;MQ=74.73;MQ0=0;MQRankSum=-1.375;QD=37.24;ReadPosRankSum=0.653;VQSLOD=5.1577;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.15:0,57,670	1/1:1,11:12:27.09:378,27,0	0/0:9,0:9:27.08:0,27,315	0/0:10,0:10:25.89:0,26,291	1/1:1,31:32:87.20:1174,87,0	0/0:17,0:17:51.14:0,51,600	0/0:10,0:10:30.06:0,30,345	1/1:3,33:36:96.26:1276,96,0	1/1:0,15:15:42.14:588,42,0	1/1:0,32:32:96.32:1345,96,0	1/1:3,21:24:66.18:899,66,0	0/0:13,0:13:39.12:0,39,468	0/0:22,0:22:63.18:0,63,744	0/0:22,0:22:63.18:0,63,746	1/1:2,21:23:60.20:840,60,0	0/0:12,0:12:33.10:0,33,396	0/0:16,0:16:48.09:0,48,558	1/1:2,11:13:33.11:460,33,0	1/1:1,13:14:39.09:510,39,0	1/1:0,33:33:96.32:1340,96,0	1/1:0,5:5:15.05:210,15,0	0/0:18,0:18:51.14:0,51,601	0/0:19,0:19:54.15:0,54,635	0/0:11,0:11:33.10:0,33,396	0/0:23,0:23:69.21:0,69,828	0/0:15,0:15:44.48:0,44,492	1/1:1,27:27:66.22:924,66,0	0/0:12,0:12:33.10:0,33,396
chr10	80127170	.	A	AG	18097.73	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-9.223;DP=593;FS=19.089;HRun=0;HaplotypeScore=62.3089;InbreedingCoeff=0.9931;MQ=82.86;MQ0=0;MQRankSum=-1.434;QD=45.70;ReadPosRankSum=2.284;VQSLOD=2.9085;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.21:0,75,1011	1/1:0,9:9:27.09:432,27,0	0/0:15,0:15:45.12:0,45,592	0/0:20,0:20:51.09:0,51,701	1/1:0,21:21:57.19:911,57,0	1/1:0,24:24:69.24:1103,69,0	0/0:13,0:13:36.12:0,36,504	1/1:1,42:43:99:2010,126,0	1/1:0,16:16:48.16:767,48,0	1/1:0,18:18:54.17:841,54,0	1/1:0,26:26:72.25:1151,72,0	0/0:18,0:18:54.17:0,54,738	1/1:2,32:34:90.30:1422,90,0	0/0:23,0:23:66.22:0,66,921	1/1:0,20:20:60.20:959,60,0	0/0:19,1:20:12.23:0,12,749	0/0:26,0:26:78.24:0,78,1069	1/1:0,14:14:33.06:525,33,0	1/1:0,13:13:39.13:624,39,0	1/1:0,28:28:84.29:1332,84,0	1/1:1,25:26:75.26:1199,75,0	0/0:16,0:16:48.16:0,48,671	0/0:16,0:16:48.16:0,48,671	0/0:5,0:5:15.05:0,15,210	1/1:0,21:21:60.20:959,60,0	1/1:0,39:38:99:1848,117,0	1/1:1,33:33:99:1582,99,0	1/1:0,10:10:27.56:432,28,0
chr10	80127433	.	CT	C	1682.10	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.449;DP=684;FS=0.536;HRun=5;HaplotypeScore=68.8204;InbreedingCoeff=0.9975;MQ=76.63;MQ0=1;MQRankSum=-1.058;QD=28.51;ReadPosRankSum=0.629;VQSLOD=3.8498;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.23:0,69,942	0/0:12,0:12:30.10:0,30,410	0/0:22,0:22:52.73:0,53,693	0/0:15,0:15:39.09:0,39,505	0/0:35,0:35:99:0,102,1379	0/0:19,0:19:54.15:0,54,706	0/0:19,0:19:54.15:0,54,705	0/0:36,0:36:99:0,105,1409	0/0:21,0:21:57.19:0,57,779	0/0:34,0:34:93.30:0,93,1245	0/0:28,0:28:78.26:0,78,1067	0/0:29,0:29:78.25:0,78,1053	1/1:1,34:35:99:1123,99,0	0/0:28,0:28:81.27:0,81,1108	0/0:32,0:32:93.30:0,93,1255	0/0:28,0:28:78.26:0,78,1067	0/0:14,0:14:36.12:0,36,491	0/0:16,0:16:42.14:0,42,572	0/0:23,0:23:63.20:0,63,848	0/0:27,0:27:75.24:0,75,1009	0/0:17,0:16:45.15:0,45,616	0/0:30,0:30:87.28:0,87,1175	0/0:29,0:29:84.28:0,84,1149	0/0:18,0:18:54.17:0,54,724	1/1:3,21:24:60.17:681,60,0	0/0:22,0:22:60.19:0,60,807	0/0:39,0:39:99:0,117,1598	0/0:7,0:7:21.07:0,21,287
chr10	80127579	.	T	TCTCATGCCTTCTGAACTGAA	42598.59	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=17.890;DP=565;FS=15.059;HRun=0;HaplotypeScore=340.5979;InbreedingCoeff=0.9039;MQ=90.29;MQ0=0;MQRankSum=-17.710;QD=196.31;ReadPosRankSum=2.120;VQSLOD=4.1394;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.22:0,63,3551	1/1:7,0:7:21.07:1814,21,0	0/0:28,0:28:72.23:0,72,3151	0/0:23,0:23:63.22:0,63,2576	1/1:7,5:12:36.12:2812,36,0	0/0:25,0:25:69.24:0,69,3765	0/0:20,0:20:60.17:0,60,2664	1/1:21,0:21:63.22:3408,63,0	1/1:13,5:19:57.20:4622,57,0	1/1:16,5:21:58.07:4591,58,0	1/1:12,9:21:54.19:4962,54,0	0/0:25,0:25:72.25:0,72,4027	0/0:30,0:30:87.28:0,87,4482	0/0:25,0:25:72.25:0,72,3791	1/1:16,5:21:57.20:4953,57,0	0/0:30,0:30:90.30:0,90,4795	0/0:26,0:26:69.24:0,69,3705	1/1:4,0:4:6.02:519,6,0	1/1:8,1:9:27.09:1842,27,0	1/1:15,3:18:51.18:4133,51,0	1/1:10,0:10:21.07:1756,21,0	0/0:24,0:24:72.25:0,72,3790	0/0:22,0:22:63.22:0,63,3301	0/0:12,0:12:33.10:0,33,1736	0/0:32,0:32:90.31:0,90,4510	0/1:24,0:24:74.18:74,0,3235	1/1:22,8:30:87.30:7113,87,0	0/0:3,0:3:9.03:0,9,510
chr10	80127581	.	TGAGTATAACCAA	T	193.74	PASS	AB=0.942;AC=6;AF=0.120;AN=50;BaseQRankSum=3.027;DP=427;FS=1.315;HRun=0;HaplotypeScore=211.7420;InbreedingCoeff=0.1147;MQ=101.85;MQ0=0;MQRankSum=-0.186;QD=6.25;ReadPosRankSum=-3.849;VQSLOD=2.1406;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.22:0,63,4001	./.	0/0:26,0:26:78.27:0,78,4143	0/0:24,0:24:69.24:0,69,3529	0/0:5,0:5:8.94:0,9,136	0/0:24,0:24:72.25:0,72,4344	0/0:21,0:21:63.20:0,63,3749	1/1:1,0:1:3.01:53,3,0	0/1:7,0:7:99:130,0,175	0/1:7,3:10:69.07:69,0,207	0/0:9,1:10:27.09:0,27,421	0/0:26,0:26:75.26:0,75,4690	0/0:30,0:30:90.30:0,90,5441	0/0:25,0:25:75.26:0,75,4447	0/0:5,0:5:15.04:0,15,216	0/0:30,0:30:90.30:0,90,5453	0/0:26,0:26:72.23:0,72,4275	./.	0/1:4,0:4:38.86:39,0,88	0/0:3,0:3:9.03:0,9,138	./.	0/0:26,0:26:78.27:0,78,4755	0/0:23,0:23:69.24:0,69,4284	0/0:11,0:11:33.11:0,33,2085	0/0:32,0:32:96.33:0,96,5920	0/0:22,0:22:63.22:0,63,3972	0/1:9,0:9:19.78:20,0,282	0/0:3,0:3:9.03:0,9,572
chr10	80127586	.	A	AG	1293.74	PASS	AC=16;AF=0.333;AN=48;BaseQRankSum=11.114;DP=425;FS=8.557;HRun=0;HaplotypeScore=119.9586;InbreedingCoeff=0.9412;MQ=99.17;MQ0=0;MQRankSum=-10.065;QD=23.52;ReadPosRankSum=4.739;VQSLOD=4.5764;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.21:0,63,881	./.	0/0:26,0:26:75.20:0,75,982	0/0:20,0:20:60.20:0,60,831	1/1:1,5:6:15.51:160,16,0	0/0:24,0:24:69.23:0,69,965	0/0:20,0:20:60.20:0,60,839	./.	1/1:1,6:7:13.73:198,14,0	1/1:3,6:10:18.51:213,19,0	1/1:1,9:10:27.08:301,27,0	0/0:27,0:27:81.27:0,81,1132	0/0:29,0:29:87.26:0,87,1196	0/0:24,0:24:72.24:0,72,1007	1/1:1,5:6:15.51:170,16,0	0/0:30,0:30:87.29:0,87,1201	0/0:25,0:25:69.23:0,69,960	./.	1/1:2,1:3:3.01:35,3,0	1/1:2,3:5:12.02:127,12,0	./.	0/0:27,0:27:81.27:0,81,1133	0/0:25,0:25:75.25:0,75,1046	0/0:13,0:13:33.11:0,33,462	0/0:33,0:33:96.29:0,96,1309	0/0:22,0:22:63.21:0,63,881	1/1:0,8:8:24.07:277,24,0	0/0:3,0:3:9.03:0,9,126
chr10	80127590	.	C	CT	1716.72	PASS	AC=18;AF=0.360;AN=50;BaseQRankSum=11.676;DP=441;FS=1.152;HRun=0;HaplotypeScore=113.0526;InbreedingCoeff=0.9558;MQ=99.61;MQ0=0;MQRankSum=-8.690;QD=26.41;ReadPosRankSum=1.726;VQSLOD=3.7858;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.22:0,66,914	./.	0/0:26,0:26:78.22:0,78,1067	0/0:23,0:23:66.18:0,66,871	1/1:1,5:6:18.05:213,18,0	0/0:24,0:24:69.22:0,69,947	0/0:20,0:20:60.20:0,60,838	1/1:0,3:3:9.03:124,9,0	1/1:1,7:8:20.09:217,20,0	1/1:3,7:10:21.06:259,21,0	1/1:2,9:11:27.08:304,27,0	0/0:28,0:28:81.27:0,81,1132	0/0:29,0:29:87.29:0,87,1217	0/0:25,0:25:75.25:0,75,1043	1/1:0,6:6:18.05:214,18,0	0/0:30,0:30:90.29:0,90,1242	0/0:25,0:25:69.23:0,69,962	./.	1/1:2,1:3:6.01:62,6,0	1/1:1,7:8:15.05:191,15,0	./.	0/0:27,0:27:78.24:0,78,1058	0/0:25,0:25:75.22:0,75,1013	0/0:14,0:14:33.11:0,33,461	0/0:31,0:31:93.31:0,93,1301	0/0:23,0:23:66.22:0,66,922	1/1:2,8:10:27.08:332,27,0	0/0:3,0:3:9.03:0,9,126
chr10	80128358	.	TTTA	T	2607.38	PASS	AC=24;AF=0.480;AN=50;BaseQRankSum=8.460;DP=176;FS=6.316;HRun=0;HaplotypeScore=28.0102;InbreedingCoeff=0.7204;MQ=61.73;MQ0=0;MQRankSum=-2.210;QD=33.43;ReadPosRankSum=-1.067;VQSLOD=2.7125;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:36.12:0,36,785	1/1:0,1:1:3.01:48,3,0	0/0:3,0:1:2.04:0,2,6	0/0:10,0:8:5.42:0,5,34	1/1:0,10:9:21.07:337,21,0	0/0:11,0:11:33.11:0,33,729	0/0:3,0:3:9.01:0,9,156	1/1:2,22:24:66.22:1044,66,0	1/1:1,1:2:3.01:48,3,0	1/1:0,5:5:15.04:210,15,0	1/1:3,3:6:9.03:144,9,0	0/0:2,0:2:6.02:0,6,132	0/0:3,0:3:9.02:0,9,150	0/0:2,0:2:6.02:0,6,132	1/1:0,2:2:3.01:48,3,0	0/0:4,0:4:12.04:0,12,265	0/0:20,0:20:54.17:0,54,1126	1/1:0,4:4:12:165,12,0	1/1:3,14:17:42.12:620,42,0	1/1:0,1:1:3.01:48,3,0	1/1:1,0:1:3:27,3,0	./.	./.	./.	0/0:9,0:9:24.08:0,24,530	0/0:7,0:7:18.06:0,18,397	1/1:2,3:4:3.01:48,3,0	0/0:11,0:11:21.07:0,21,464
chr10	80128649	.	AT	A	1298	PASS	AC=6;AF=0.143;AN=42;BaseQRankSum=3.012;DP=323;FS=14.111;HRun=9;HaplotypeScore=39.6553;InbreedingCoeff=0.7008;MQ=71.27;MQ0=0;MQRankSum=1.242;QD=21.28;ReadPosRankSum=-0.111;VQSLOD=2.5942;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.17:0,72,815	./.	0/0:16,0:14:1.74:0,2,124	0/0:11,0:9:2.53:0,3,119	./.	1/1:2,22:24:57.02:522,57,0	0/0:11,0:11:30.09:0,30,344	0/0:14,0:14:0:0,0,0	./.	./.	0/0:5,0:5:0:0,0,0	0/0:18,0:18:48.14:0,48,554	0/0:18,0:18:45.12:0,45,508	0/0:14,0:14:42.11:0,42,474	0/0:9,0:9:0:0,0,0	0/0:17,0:17:45.13:0,45,519	0/0:29,0:29:72.21:0,72,831	./.	./.	0/0:4,0:4:0:0,0,0	./.	0/0:5,0:5:15.04:0,15,173	0/0:9,0:9:27.08:0,27,312	0/0:4,0:4:12.04:0,12,139	0/0:10,0:10:21.06:0,21,242	1/1:1,19:20:57.02:517,57,0	0/0:12,0:12:0:0,0,0	1/1:3,14:17:42.02:384,42,0
chr10	80128863	.	CT	C	856.18	PASS	AB=0.850;AC=11;AF=0.289;AN=38;BaseQRankSum=5.360;DP=333;FS=1.965;HRun=10;HaplotypeScore=59.9855;InbreedingCoeff=0.4868;MQ=63.40;MQ0=13;MQRankSum=-0.578;QD=7.51;ReadPosRankSum=2.309;VQSLOD=1.6922;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,1:39:73.11:0,73,989	./.	0/0:20,0:7:13.28:0,13,136	0/0:16,0:9:6.54:0,7,87	./.	0/1:21,3:23:18.09:18,0,456	0/1:18,6:23:99:102,0,344	./.	1/1:0,4:4:9:78,9,0	./.	./.	0/0:15,0:15:42.11:0,42,464	1/1:2,14:16:38.99:339,39,0	0/1:21,4:25:43.92:44,0,457	./.	0/0:19,1:20:28:0,28,510	0/0:21,1:20:28.04:0,28,516	1/1:0,1:1:3:26,3,0	0/0:2,0:1:3.01:0,3,33	./.	./.	0/0:14,0:14:42.11:0,42,465	0/0:13,1:14:13.05:0,13,372	0/0:19,1:20:28.10:0,28,529	1/1:2,18:20:44.99:391,45,0	0/0:19,0:20:53.96:0,54,570	./.	0/0:12,0:12:30.08:0,30,332
chr10	80129516	.	ATT	A	910.79	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.866;DP=552;FS=1.569;HRun=7;HaplotypeScore=119.7826;InbreedingCoeff=0.9676;MQ=73.03;MQ0=0;MQRankSum=-0.626;QD=26.79;ReadPosRankSum=0.747;VQSLOD=2.8307;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.17:0,51,891	0/0:7,0:7:21.07:0,21,367	0/0:21,0:21:47.50:0,47,715	0/0:12,0:12:9.06:0,9,349	0/0:22,0:22:63.17:0,63,1052	0/0:20,0:20:54.16:0,54,909	0/0:15,0:15:45.15:0,45,787	0/0:39,0:39:99:0,99,1732	0/0:18,0:18:48.16:0,48,840	0/0:22,0:22:63.22:0,63,1097	0/0:30,0:30:84.28:0,84,1437	0/0:23,0:23:60.21:0,60,1050	1/1:1,13:14:36.11:459,36,0	0/0:24,0:24:69.23:0,69,1187	0/0:29,0:29:81.27:0,81,1383	0/0:24,0:24:72.23:0,72,1232	0/0:21,0:21:60.20:0,60,1032	0/0:11,0:11:24.06:0,24,377	0/0:19,0:19:48.16:0,48,840	0/0:23,0:23:66.23:0,66,1154	0/0:13,0:13:39.12:0,39,656	0/0:14,0:14:39.13:0,39,682	0/0:24,0:24:69.24:0,69,1207	0/0:11,0:11:30.10:0,30,525	1/1:3,17:20:45.14:574,45,0	0/0:20,0:20:60.19:0,60,1021	0/0:23,0:23:63.22:0,63,1102	0/0:14,0:14:38.65:0,39,680
chr10	80129830	.	CAAAA	C	5639.89	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=5.580;DP=409;FS=0.883;HRun=15;HaplotypeScore=74.6099;InbreedingCoeff=0.9460;MQ=57.31;MQ0=3;MQRankSum=-2.736;QD=27.92;ReadPosRankSum=5.235;VQSLOD=4.0462;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:15:39.13:0,39,793	1/1:1,3:4:6:82,6,0	0/0:21,0:12:18.04:0,18,257	0/0:9,0:2:3.01:0,3,34	1/1:2,16:19:38.90:514,39,0	0/0:10,0:12:33.11:0,33,643	0/0:3,0:4:12.04:0,12,246	1/1:7,17:24:44.80:593,45,0	1/1:2,10:12:30.03:409,30,0	1/1:4,22:27:67.35:920,67,0	1/1:2,18:21:52.36:698,52,0	0/0:11,0:12:27.09:0,27,587	0/0:7,0:14:33.08:0,33,479	0/0:15,0:15:33.10:0,33,686	1/1:2,13:15:36.07:491,36,0	0/0:13,0:14:33.11:0,33,705	0/0:7,0:8:24:0,24,486	1/1:5,12:19:30.96:394,31,0	1/1:6,11:18:34.14:432,34,0	1/1:4,13:17:32.96:450,33,0	1/1:1,7:8:12.03:164,12,0	0/0:14,0:17:48.12:0,48,985	0/0:16,0:16:30.10:0,30,654	0/0:11,0:11:27.07:0,27,611	0/0:7,0:12:26.99:0,27,393	0/0:10,0:21:57:0,57,761	1/1:2,15:18:37.36:494,37,0	0/0:0,0:5:12.04:0,12,149
chr10	80130286	.	TG	T	6135.97	PASS	AB=0.850;AC=41;AF=0.732;AN=56;BaseQRankSum=10.023;DP=493;FS=8.374;HRun=10;HaplotypeScore=84.6012;InbreedingCoeff=0.3740;MQ=77.62;MQ0=0;MQRankSum=-2.082;QD=14.20;ReadPosRankSum=3.417;VQSLOD=4.7225;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:9,3:12:60.11:60,0,82	1/1:3,7:10:20.99:182,21,0	0/1:11,1:14:33.43:33,0,198	0/0:19,0:19:15.05:0,15,287	1/1:1,24:25:68.98:599,69,0	1/1:2,25:27:71.98:625,72,0	0/1:17,3:20:33.04:33,0,353	1/1:2,12:14:29.97:260,30,0	1/1:3,11:15:35.02:293,35,0	1/1:3,22:25:62.97:547,63,0	1/1:1,19:20:53.99:469,54,0	0/0:13,0:13:27.05:0,27,282	1/1:1,0:19:34.63:102,35,0	0/0:16,0:16:33.08:0,33,354	1/1:3,17:22:52.53:429,53,0	0/0:12,1:13:7.02:0,7,298	0/1:19,2:21:0.97:1,0,447	1/1:2,2:4:5.99:52,6,0	1/1:3,9:14:31.06:244,31,0	1/1:7,24:31:62.95:547,63,0	1/1:1,11:12:35.99:313,36,0	0/1:12,3:16:36.24:36,0,289	0/1:20,4:24:27.09:27,0,391	0/1:7,4:11:77.18:77,0,122	1/1:5,0:23:35.09:102,35,0	1/1:5,21:26:29.76:479,30,0	1/1:3,20:23:59.97:521,60,0	1/1:0,4:4:12:104,12,0
chr10	80131026	.	T	TTAA	8592.97	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=13.916;DP=597;FS=22.911;HRun=0;HaplotypeScore=105.9163;InbreedingCoeff=0.8890;MQ=72.99;MQ0=0;MQRankSum=-3.031;QD=32.06;ReadPosRankSum=-0.113;VQSLOD=3.1786;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.18:0,84,1409	1/1:2,4:8:11.97:182,12,0	0/0:20,0:20:54.01:0,54,826	0/0:21,0:21:50.70:0,51,653	1/1:3,23:30:80.95:1170,81,0	0/0:29,0:29:87.28:0,87,1542	0/0:24,0:24:66.10:0,66,1195	1/1:10,9:24:36.89:524,37,0	1/1:1,11:15:30.10:529,30,0	1/1:5,11:24:58.23:783,58,0	1/1:1,14:17:41.05:687,41,0	0/0:23,0:23:69.20:0,69,1221	0/1:13,0:13:10.14:10,0,273	0/0:25,0:25:69.24:0,69,1274	1/1:1,22:29:48.16:900,48,0	0/0:26,0:26:75.23:0,75,1324	0/0:21,0:21:63.17:0,63,1108	1/1:3,15:20:38.38:891,38,0	1/1:8,7:16:0.06:382,0,0	1/1:5,19:25:59.93:1110,60,0	1/1:2,2:12:12.37:188,12,0	0/0:24,0:24:69.22:0,69,1240	0/0:29,0:29:87.27:0,87,1540	0/0:9,0:9:27.09:0,27,496	0/0:11,0:11:33.03:0,33,396	0/0:22,0:22:66.21:0,66,1169	1/1:7,24:35:62.87:1236,63,0	0/0:14,0:14:42.12:0,42,749
chr10	80131598	.	A	AT	2972.94	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-11.163;DP=556;FS=2.683;HRun=5;HaplotypeScore=71.4163;InbreedingCoeff=0.9956;MQ=79.29;MQ0=0;MQRankSum=-0.924;QD=31.97;ReadPosRankSum=4.774;VQSLOD=4.1551;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.20:0,81,870	0/0:6,0:6:18.05:0,18,193	0/0:20,0:20:57.08:0,57,577	0/0:14,0:14:24.11:0,24,311	0/0:36,0:36:99:0,99,1064	1/1:2,16:18:42.14:553,42,0	0/0:23,0:23:60.13:0,60,636	0/0:30,0:30:69.13:0,69,718	0/0:14,0:14:39.10:0,39,419	0/0:23,0:23:63.16:0,63,677	0/0:19,0:19:57.13:0,57,604	0/0:26,0:26:75.17:0,75,798	1/1:0,19:19:45.15:592,45,0	0/0:15,0:15:36.09:0,36,387	0/0:16,0:16:48.12:0,48,516	0/0:17,0:17:51.13:0,51,548	0/0:23,0:23:60.15:0,60,645	0/0:11,0:11:27.04:0,27,279	0/0:25,0:25:57.14:0,57,613	0/0:19,0:19:57.13:0,57,605	0/0:19,0:19:51.13:0,51,548	0/0:20,0:20:57.14:0,57,613	0/0:11,0:11:27.05:0,27,282	0/0:15,0:15:42.11:0,42,451	1/1:2,18:20:54.18:711,54,0	1/1:2,16:18:18.91:599,19,0	0/0:32,0:31:84.21:0,84,903	1/1:1,17:18:54.15:694,54,0
chr10	80131763	.	C	CA	4129.28	PASS	AB=0.798;AC=30;AF=0.536;AN=56;BaseQRankSum=1.657;DP=504;FS=16.288;HRun=12;HaplotypeScore=79.8304;InbreedingCoeff=0.4355;MQ=58.74;MQ0=10;MQRankSum=-1.231;QD=11.57;ReadPosRankSum=-3.299;VQSLOD=0.8395;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,13:25:22.53:388,23,0	1/1:1,10:12:29.72:274,30,0	0/1:15,0:6:15.65:16,0,49	0/1:10,0:7:22.81:23,0,36	1/1:17,16:34:25.95:389,26,0	1/1:2,1:16:25.73:143,26,0	0/0:14,0:13:35.27:0,35,246	0/1:12,18:27:15.56:325,0,16	1/1:3,8:11:12.02:116,12,0	1/1:5,16:22:28.21:394,28,0	1/1:7,17:23:26.17:415,26,0	0/0:12,0:12:29.80:0,30,216	0/0:2,0:20:24.44:0,24,71	0/1:6,1:7:18.65:19,0,53	1/1:3,6:9:10.26:90,10,0	0/0:15,0:15:35.76:0,36,262	0/0:22,0:19:44.22:0,44,312	0/1:10,5:13:13.84:151,0,14	0/1:12,6:19:0.64:209,0,1	0/1:17,12:30:21.25:361,0,21	0/1:7,5:12:44.67:96,0,45	0/0:15,0:15:41.76:0,42,306	0/0:21,1:23:22.71:0,23,311	0/0:14,0:12:23.72:0,24,174	0/0:3,0:10:14.25:0,14,42	1/1:10,2:19:5.98:143,6,0	1/1:6,27:33:17.94:461,18,0	1/1:3,1:10:20.52:116,21,0
chr10	80132176	.	T	TAA	679.36	PASS	AB=0.775;AC=9;AF=0.161;AN=56;BaseQRankSum=3.575;DP=645;FS=0.000;HRun=11;HaplotypeScore=86.8276;InbreedingCoeff=0.6667;MQ=57.73;MQ0=3;MQRankSum=-0.684;QD=7.30;ReadPosRankSum=-1.905;VQSLOD=0.2609;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:43:92.81:0,93,883	0/0:5,0:5:15.02:0,15,145	0/0:19,0:12:11.97:0,12,116	0/1:17,0:10:1.93:2,0,81	0/0:27,0:28:56.53:0,57,579	0/1:3,1:18:22.22:67,0,22	0/0:20,0:22:47.78:0,48,448	0/0:23,0:23:50.67:0,51,513	0/0:23,0:23:32.96:0,33,500	0/0:23,0:23:44.23:0,44,464	0/0:26,0:27:71.83:0,72,681	0/0:20,0:23:41.48:0,41,373	1/1:2,16:18:24.08:348,24,0	0/0:29,0:29:66.03:0,66,634	0/0:34,0:38:72.63:0,73,723	0/0:24,0:25:59.76:0,60,557	0/0:27,0:27:68.98:0,69,646	0/0:20,0:20:60.04:0,60,567	0/0:33,0:31:84.01:0,84,801	0/0:27,0:28:62.77:0,63,594	0/0:19,0:19:41.98:0,42,407	0/0:28,0:29:55.46:0,55,528	0/0:25,0:25:47.84:0,48,465	0/0:16,0:17:38.76:0,39,361	1/1:1,12:16:23.99:300,24,0	1/1:7,0:18:27.94:110,28,0	0/0:21,0:21:45.02:0,45,436	0/1:4,0:5:3.10:3,0,24
chr10	80132398	.	T	TA	1246.65	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.524;DP=600;FS=0.000;HRun=0;HaplotypeScore=66.6004;InbreedingCoeff=0.9919;MQ=64.35;MQ0=0;MQRankSum=-8.473;QD=37.78;ReadPosRankSum=-0.223;VQSLOD=3.4662;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,157,2180	0/0:8,0:8:21.07:0,21,293	0/0:22,0:14:32.63:0,33,461	0/0:29,1:22:57.93:0,58,826	0/0:11,0:11:33.11:0,33,461	1/1:0,14:14:36.12:574,36,0	0/0:26,0:26:69.23:0,69,965	0/0:30,0:30:84.28:0,84,1173	0/0:21,0:21:60.20:0,60,838	0/0:20,0:20:57.19:0,57,785	0/0:11,0:11:33.11:0,33,461	0/0:25,0:25:75.25:0,75,1048	0/0:17,0:17:51.15:0,51,691	0/0:17,0:17:48.15:0,48,654	0/0:34,0:34:96.31:0,96,1326	0/0:23,0:23:69.23:0,69,964	0/0:22,0:22:63.21:0,63,881	0/0:30,1:31:39.51:0,40,1127	0/0:19,0:19:57.18:0,57,775	0/0:10,0:10:30.10:0,30,414	0/0:48,0:48:99:0,138,1895	0/0:9,0:9:27.09:0,27,378	0/0:17,0:17:48.16:0,48,671	0/0:20,0:20:57.19:0,57,796	0/0:20,0:20:60.20:0,60,839	1/1:0,14:12:36.12:574,36,0	0/0:21,0:21:63.21:0,63,876	1/1:0,5:5:15.05:239,15,0
chr10	80132659	.	TA	T	245.90	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.765;DP=256;FS=11.412;HRun=8;HaplotypeScore=51.5060;InbreedingCoeff=0.6984;MQ=62.45;MQ0=3;MQRankSum=-0.184;QD=13.66;ReadPosRankSum=-0.189;VQSLOD=1.7827;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:18:41.98:0,42,475	0/0:6,0:5:15.05:0,15,181	0/0:10,0:10:12.49:0,12,178	0/0:7,0:5:12.04:0,12,145	0/0:15,0:14:39.11:0,39,459	1/1:3,4:6:12.02:116,12,0	0/0:6,0:6:15.03:0,15,170	0/0:18,0:17:42.12:0,42,498	0/0:6,0:6:18.05:0,18,214	0/0:10,0:11:29.96:0,30,341	0/0:11,1:12:4.12:0,4,332	0/0:4,0:4:11.06:0,11,115	0/0:11,0:11:27.07:0,27,314	0/0:5,0:5:11.99:0,12,129	0/0:8,0:8:21.06:0,21,250	0/0:4,0:4:9.03:0,9,109	0/0:9,0:9:24.06:0,24,278	0/0:11,0:11:27.04:0,27,308	0/0:14,0:12:27.08:0,27,323	0/0:20,0:20:54.15:0,54,634	0/0:2,0:2:3.01:0,3,37	0/0:1,0:1:3.01:0,3,36	0/0:3,0:3:6.02:0,6,72	0/0:4,0:4:6.02:0,6,72	0/0:21,0:21:63.19:0,63,760	1/1:1,3:4:9.01:86,9,0	0/0:11,0:11:30.09:0,30,359	1/1:0,7:7:18.03:174,18,0
chr10	80132688	.	CAAAAAAA	C	5807.45	PASS	AB=0.542;AC=24;AF=0.429;AN=56;BaseQRankSum=-1.170;DP=276;FS=0.000;HRun=16;HaplotypeScore=81.1620;InbreedingCoeff=0.8045;MQ=64.80;MQ0=5;MQRankSum=-8.812;QD=45.37;ReadPosRankSum=-0.400;VQSLOD=3.7536;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:16:36.12:0,36,895	1/1:0,8:8:21.04:429,21,0	0/0:18,0:9:9.39:0,9,185	0/0:19,0:8:9.01:0,9,132	1/1:5,12:16:29.96:581,30,0	0/0:3,0:5:11.90:0,12,85	0/0:5,0:6:18.06:0,18,641	1/1:2,17:18:48.11:940,48,0	1/1:2,5:7:15.01:306,15,0	1/1:2,7:9:21.04:429,21,0	1/1:4,5:9:17.96:367,18,0	0/0:6,0:6:18.06:0,18,568	0/0:1,0:7:20.83:0,21,182	0/0:5,0:5:12.04:0,12,410	0/1:2,5:7:6.48:288,0,6	0/0:7,0:7:18.06:0,18,630	0/0:9,0:17:36.12:0,36,1223	1/1:3,7:10:27.05:486,27,0	1/1:3,6:9:17.98:368,18,0	1/1:0,16:16:48.16:981,48,0	1/1:2,1:4:5.95:90,6,0	0/0:2,0:4:12.04:0,12,314	0/0:3,0:6:18.06:0,18,610	0/0:4,0:4:9.03:0,9,329	0/0:3,0:20:56.37:0,56,376	0/1:0,1:3:30.32:52,0,30	1/1:1,8:9:24.04:491,24,0	0/0:1,0:6:17.85:0,18,144
chr10	80132772	.	TG	T	5681.76	PASS	AB=0.917;AC=25;AF=0.446;AN=56;BaseQRankSum=5.836;DP=363;FS=2.659;HRun=3;HaplotypeScore=47.9205;InbreedingCoeff=0.9100;MQ=81.43;MQ0=0;MQRankSum=-3.802;QD=30.88;ReadPosRankSum=-0.858;VQSLOD=4.1053;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.17:0,51,734	1/1:1,3:4:9.03:111,9,0	0/0:18,0:18:51.07:0,51,662	0/0:18,0:18:47.37:0,47,639	1/1:1,20:21:57.11:687,57,0	0/0:12,0:12:33.09:0,33,443	0/0:10,0:10:30.08:0,30,413	1/1:2,21:23:63.18:767,63,0	1/1:0,9:9:24.08:297,24,0	1/1:0,11:11:33.10:398,33,0	1/1:1,17:18:45.10:540,45,0	0/0:11,0:11:30.10:0,30,431	0/0:15,0:15:45.13:0,45,629	0/0:11,0:11:33.11:0,33,474	1/1:0,10:10:30.03:352,30,0	0/0:8,0:8:24.08:0,24,346	0/0:13,0:13:39.11:0,39,537	1/1:1,11:12:33.06:391,33,0	1/1:0,17:17:48.13:581,48,0	1/1:0,16:16:42.13:520,42,0	1/1:0,6:6:12.04:149,12,0	0/0:6,0:6:18.06:0,18,259	0/0:13,0:13:36.12:0,36,518	0/0:6,0:6:18.06:0,18,258	0/0:13,0:13:33.07:0,33,452	0/1:10,1:11:31.50:31,0,351	1/1:0,26:26:69.22:855,69,0	0/0:8,0:8:15.05:0,15,216
chr10	80132940	.	TA	T	731.53	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.397;DP=476;FS=5.033;HRun=9;HaplotypeScore=52.8152;InbreedingCoeff=0.8626;MQ=73.95;MQ0=0;MQRankSum=-2.125;QD=16.26;ReadPosRankSum=0.273;VQSLOD=3.5826;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:33.08:0,33,369	0/0:13,0:13:36.11:0,36,415	0/0:12,0:12:2.39:0,2,187	0/0:13,0:13:15.27:0,15,182	0/0:27,0:27:72.16:0,72,808	1/1:1,10:11:27.01:247,27,0	0/0:12,0:12:33.08:0,33,370	0/0:29,0:29:72.21:0,72,824	0/0:15,0:15:42.12:0,42,480	0/0:16,0:16:48.14:0,48,554	0/0:17,0:17:51.15:0,51,587	0/0:15,0:15:42.10:0,42,466	0/0:2,0:22:54.13:0,54,286	0/0:14,0:14:36.09:0,36,404	0/0:14,0:14:39.12:0,39,450	0/0:13,0:12:36.09:0,36,405	0/0:22,0:22:63.19:0,63,727	0/0:9,0:9:18:0,18,183	0/0:20,2:22:2.22:0,2,503	0/0:20,0:20:48.13:0,48,546	0/0:18,0:18:51.14:0,51,579	0/0:12,0:12:36.05:0,36,391	0/0:11,0:11:33.10:0,33,381	0/0:15,0:15:45.12:0,45,508	0/0:1,0:18:48.29:0,48,245	1/1:6,16:22:16.41:405,16,0	0/0:38,0:38:99:0,105,1201	1/1:2,10:12:24.01:219,24,0
chr10	80133395	.	AG	A	2373.29	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.946;DP=692;FS=1.646;HRun=1;HaplotypeScore=92.6021;InbreedingCoeff=0.9993;MQ=68.72;MQ0=0;MQRankSum=-1.706;QD=38.91;ReadPosRankSum=1.207;VQSLOD=4.0941;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1888	0/0:14,0:14:42.12:0,42,644	0/0:23,0:21:61.42:0,61,893	0/0:23,0:22:60.19:0,60,919	0/0:30,0:30:87.23:0,87,1295	1/1:0,25:25:72.24:1006,72,0	0/0:24,0:24:72.25:0,72,1151	0/0:26,0:26:72.25:0,72,1149	0/0:16,0:16:48.16:0,48,767	0/0:28,0:28:84.29:0,84,1343	0/0:23,0:23:63.21:0,63,1004	0/0:22,0:22:66.23:0,66,1055	0/0:18,0:18:51.16:0,51,791	0/0:25,0:25:75.24:0,75,1175	0/0:39,0:39:99:0,114,1818	0/0:23,0:23:69.24:0,69,1103	0/0:24,0:24:72.25:0,72,1151	0/0:18,0:18:48.16:0,48,767	0/0:16,0:16:48.14:0,48,724	0/0:35,0:35:99:0,102,1605	0/0:26,0:26:78.20:0,78,1152	0/0:31,0:31:93.32:0,93,1483	0/0:32,0:32:87.27:0,87,1355	0/0:18,0:18:54.18:0,54,863	0/0:24,0:24:72.25:0,72,1148	1/1:0,28:28:84.28:1174,84,0	0/0:31,0:31:93.32:0,93,1486	1/1:0,8:8:24.08:336,24,0
chr10	80134135	.	GCCAGAAGAACGA	G	4882.10	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.263;DP=784;FS=1.204;HRun=0;HaplotypeScore=310.2958;InbreedingCoeff=0.9936;MQ=84.21;MQ0=1;MQRankSum=-10.395;QD=82.75;ReadPosRankSum=2.659;VQSLOD=4.0793;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,184,10428	0/0:8,0:8:24.08:0,24,1460	0/0:34,0:35:71.84:0,72,4499	0/0:36,0:34:90.96:0,91,3863	0/0:27,0:27:81.28:0,81,4513	1/1:4,23:27:57.20:2198,57,0	0/0:34,0:34:99:0,102,5962	0/0:34,0:34:90.31:0,90,5071	0/0:23,0:22:66.23:0,66,4027	0/0:34,0:34:99:0,102,6019	0/0:22,0:22:66.23:0,66,3977	0/0:19,0:19:57.20:0,57,3340	0/0:28,0:28:84.29:0,84,5167	0/0:28,0:28:81.28:0,81,4711	0/0:35,0:35:99:0,105,6009	0/0:35,0:35:99:0,105,5985	0/0:38,0:38:99:0,111,6579	0/0:17,0:17:48.16:0,48,2858	0/0:18,0:18:54.19:0,54,2941	0/0:32,0:32:96.31:0,96,5475	0/0:29,0:29:84.27:0,84,4862	0/0:29,0:29:87.28:0,87,5249	0/0:24,0:24:69.24:0,69,3948	0/0:29,0:28:84.29:0,84,4986	0/0:27,0:27:81.28:0,81,4829	1/1:1,20:21:57.20:2107,57,0	0/0:22,0:22:66.23:0,66,3785	1/1:1,10:11:15.05:577,15,0
chr10	80134396	.	T	TCTTGTCATG	29420.80	PASS	AB=0.765;AC=33;AF=0.589;AN=56;BaseQRankSum=-0.490;DP=551;FS=0.000;HRun=0;HaplotypeScore=150.2145;InbreedingCoeff=0.9082;MQ=86.39;MQ0=0;MQRankSum=-16.943;QD=101.45;ReadPosRankSum=-0.952;VQSLOD=5.0904;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,2893	1/1:2,3:5:15.05:722,15,0	0/0:23,0:23:62.88:0,63,1560	0/0:28,0:28:78.26:0,78,2042	1/1:5,9:15:36.12:1441,36,0	1/1:3,0:12:27.09:1082,27,0	0/0:16,0:16:45.15:0,45,1317	1/1:29,9:37:99:3783,105,0	1/1:9,13:24:69.24:2926,69,0	1/1:9,13:22:54.18:2320,54,0	1/1:4,4:8:21.07:872,21,0	0/0:24,0:24:69.24:0,69,2002	1/1:5,9:14:39.09:1734,39,0	0/0:21,0:21:60.19:0,60,1674	1/1:7,15:22:60.21:2773,60,0	0/0:17,0:17:39.13:0,39,1152	0/0:24,0:24:66.23:0,66,1891	0/1:9,4:13:99:1000,0,152	1/1:11,6:18:45.15:1745,45,0	1/1:4,7:11:24.08:1110,24,0	1/1:9,7:17:24.08:1028,24,0	0/0:18,0:18:54.19:0,54,1524	0/0:19,0:19:57.20:0,57,1709	0/0:34,0:34:99:0,99,2786	1/1:9,12:20:51.15:2257,51,0	1/1:5,0:21:51.17:1859,51,0	1/1:10,13:26:63.22:2613,63,0	1/1:2,0:2:6.01:153,6,0
chr10	80134424	.	AT	A	3617.76	PASS	AB=0.556;AC=23;AF=0.411;AN=56;BaseQRankSum=9.455;DP=472;FS=5.653;HRun=10;HaplotypeScore=101.8205;InbreedingCoeff=0.8670;MQ=73.16;MQ0=0;MQRankSum=-4.758;QD=18.84;ReadPosRankSum=-2.680;VQSLOD=2.7375;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.17:0,81,868	1/1:1,3:4:9:78,9,0	0/0:15,0:14:18.93:0,19,198	0/0:11,0:11:0.05:0,0,113	1/1:1,14:15:32.97:286,33,0	0/0:16,0:16:39.06:0,39,411	0/0:11,0:11:30.05:0,30,314	1/1:6,24:30:71.97:625,72,0	1/1:5,18:23:50.96:443,51,0	1/1:5,15:20:32.98:286,33,0	1/1:2,5:7:14.98:130,15,0	0/0:18,0:19:44.94:0,45,471	0/0:2,0:10:25.74:0,26,134	0/0:15,0:15:33.07:0,33,354	1/1:3,18:21:47.98:417,48,0	0/0:20,1:22:33.92:0,34,576	0/0:23,1:24:43.13:0,43,704	0/1:2,8:10:39.36:155,0,39	1/1:3,15:18:44.98:390,45,0	1/1:2,15:17:38.98:338,39,0	1/1:3,6:9:8.98:78,9,0	0/0:14,0:14:27.07:0,27,297	0/0:17,0:18:44.94:0,45,471	0/0:32,0:33:96.03:0,96,1014	0/0:5,0:18:34.09:0,34,170	0/0:19,1:20:22.03:0,22,458	1/1:3,15:18:44.99:391,45,0	0/0:5,0:5:15:0,15,146
chr10	80134802	.	ATGTGTG	A	160.87	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=1.658;DP=381;FS=0.000;HRun=0;HaplotypeScore=101.7751;InbreedingCoeff=0.3461;MQ=55.29;MQ0=9;MQRankSum=-2.534;QD=20.11;ReadPosRankSum=-0.302;VQSLOD=3.1564;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:28:15.28:0,15,316	./.	0/0:19,0:13:11.90:0,12,141	0/0:17,0:9:3.01:0,3,31	0/0:14,0:14:9.03:0,9,212	0/0:6,0:5:3.01:0,3,98	0/0:19,0:19:40.93:0,41,1020	0/0:23,0:23:36.10:0,36,822	0/0:12,0:12:6.02:0,6,124	0/0:10,0:9:15.05:0,15,330	0/0:6,0:5:3:0,3,25	0/0:9,0:9:18.06:0,18,539	1/1:2,6:8:11.99:246,12,0	0/0:10,0:11:15.02:0,15,373	0/0:17,0:16:6.02:0,6,150	0/0:14,0:15:36.12:0,36,1026	0/0:21,0:22:39.05:0,39,1016	0/0:11,0:11:15.05:0,15,398	0/0:12,0:11:12.02:0,12,223	0/0:14,0:13:3.01:0,3,62	0/0:15,0:15:6.49:0,6,133	0/0:7,0:7:9.03:0,9,242	0/0:12,0:12:9.01:0,9,140	0/0:19,0:19:45.15:0,45,1313	0/0:13,0:11:6:0,6,126	0/0:14,0:11:24.05:0,24,460	0/0:20,0:19:24.06:0,24,490	./.
chr10	80134843	.	T	TG	948.67	PASS	AB=0.744;AC=11;AF=0.196;AN=56;BaseQRankSum=2.496;DP=384;FS=34.969;HRun=0;HaplotypeScore=81.7849;InbreedingCoeff=-0.2644;MQ=64.56;MQ0=10;MQRankSum=-5.321;QD=5.45;ReadPosRankSum=-3.286;VQSLOD=0.7394;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,4:23:62.63:63,0,360	0/0:2,0:2:2.98:0,3,21	0/0:22,0:13:36.11:0,36,490	0/0:25,0:15:30.94:0,31,555	0/1:4,1:5:33.04:55,0,33	0/0:6,2:7:15.01:0,15,187	0/0:18,0:18:48.39:0,48,679	0/1:20,7:27:99:247,0,714	0/0:9,3:12:17.98:0,18,208	0/1:4,5:8:99:136,0,144	0/0:6,2:7:12.03:0,12,153	0/0:11,0:11:30.10:0,30,413	0/0:7,0:7:18.06:0,18,227	0/0:10,0:10:21.07:0,21,291	0/1:8,7:14:29.55:30,0,169	0/0:12,0:12:36.12:0,36,503	0/0:24,0:24:28.87:0,29,807	0/1:4,5:9:99:167,0,124	0/1:19,3:22:70.42:70,0,575	0/0:7,7:14:21.03:0,21,272	0/1:14,4:18:8.85:9,0,355	0/0:7,0:7:18.06:0,18,252	0/0:4,0:4:12.04:0,12,167	0/0:25,0:25:69.23:0,69,959	0/1:6,7:11:16.96:17,0,131	0/1:6,5:8:99:125,0,108	0/1:11,9:18:99:176,0,346	0/0:1,0:1:3.01:0,3,42
chr10	80136072	.	ATTG	A	640.22	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.333;DP=609;FS=2.255;HRun=0;HaplotypeScore=117.6826;InbreedingCoeff=0.9306;MQ=80.09;MQ0=0;MQRankSum=0.038;QD=30.49;ReadPosRankSum=1.403;VQSLOD=4.1556;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.23:0,81,1750	0/0:4,0:4:9.03:0,9,201	0/0:16,0:16:30.24:0,30,690	0/0:20,0:20:54.18:0,54,1040	0/0:30,0:30:78.24:0,78,1601	0/0:31,0:31:90.31:0,90,1989	0/0:18,0:18:54.18:0,54,1175	0/0:32,0:32:75.26:0,75,1654	0/0:23,0:23:69.20:0,69,1464	0/0:16,0:16:48.16:0,48,1057	0/0:24,0:24:66.23:0,66,1466	0/0:16,0:16:45.15:0,45,990	0/0:29,0:29:75.18:0,75,1532	0/0:22,0:22:63.22:0,63,1387	0/0:29,0:29:72.18:0,72,1473	0/0:26,0:26:72.25:0,72,1581	0/0:21,0:21:57.16:0,57,1209	0/0:15,0:15:36.12:0,36,756	0/0:14,0:14:36.12:0,36,789	0/0:29,0:29:87.30:0,87,1914	0/0:18,0:18:51.18:0,51,1128	0/0:20,0:20:57.20:0,57,1273	0/0:18,0:18:48.16:0,48,1043	0/0:22,0:22:63.22:0,63,1392	1/1:0,21:21:45.15:735,45,0	0/0:26,0:25:72.25:0,72,1553	0/0:31,0:31:81.23:0,81,1762	0/0:8,0:8:15.05:0,15,335
chr10	80136747	.	G	GAC	2641.12	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=5.065;DP=184;FS=0.000;HRun=0;HaplotypeScore=41.8187;InbreedingCoeff=0.7298;MQ=64.76;MQ0=0;MQRankSum=-4.495;QD=28.10;ReadPosRankSum=-0.003;VQSLOD=3.9463;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:20.99:0,21,237	1/1:0,1:1:3.01:51,3,0	0/0:4,0:3:8.54:0,9,48	0/0:6,0:5:16.86:0,17,200	1/1:3,9:12:3.01:50,3,0	1/1:0,4:4:9.03:158,9,0	0/0:11,0:11:30.07:0,30,406	1/1:2,12:14:42.14:729,42,0	1/1:1,2:3:6.02:105,6,0	1/1:0,5:5:15.05:265,15,0	1/1:0,4:4:3.01:49,3,0	0/0:6,0:6:11.93:0,12,165	0/0:5,0:5:12.04:0,12,170	0/0:7,0:7:14.99:0,15,172	1/1:0,11:11:12.04:213,12,0	0/0:4,0:4:12.04:0,12,171	0/0:10,0:10:14.27:0,14,213	1/1:1,2:3:9.02:130,9,0	1/1:1,3:4:12.04:212,12,0	1/1:1,5:6:3.01:50,3,0	1/1:3,4:7:6.02:107,6,0	0/0:12,0:12:6.02:0,6,85	0/0:10,0:10:6.02:0,6,79	0/0:6,0:6:3.01:0,3,35	1/1:1,1:2:3.01:55,3,0	1/1:0,5:6:18.06:307,18,0	1/1:1,6:7:12.04:208,12,0	1/1:0,5:5:9.03:153,9,0
chr10	80138259	.	G	GTT	8758.38	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=13.355;DP=470;FS=10.791;HRun=7;HaplotypeScore=99.0971;InbreedingCoeff=0.9621;MQ=70.45;MQ0=1;MQRankSum=-11.705;QD=31.96;ReadPosRankSum=-3.348;VQSLOD=3.1361;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:6:13.84:119,14,0	1/1:0,3:4:11.91:160,12,0	0/0:26,0:24:36.99:0,37,389	0/0:22,0:18:41.15:0,41,451	1/1:11,5:17:41.97:465,42,0	1/1:5,9:14:34.66:511,35,0	0/0:24,0:24:59.81:0,60,658	1/1:21,7:29:72.22:834,72,0	1/1:6,5:11:25.21:305,25,0	1/1:7,11:19:56.94:759,57,0	1/1:6,10:15:42.08:586,42,0	0/0:12,0:12:30.08:0,30,349	1/1:4,0:11:29.70:268,30,0	0/0:16,0:16:45.08:0,45,498	1/1:10,7:17:32.73:546,33,0	0/0:19,0:19:54.14:0,54,617	0/0:12,0:12:30.09:0,30,350	1/1:9,2:11:17.57:276,18,0	1/1:16,2:17:39.69:510,40,0	1/1:12,15:29:78.68:1120,79,0	1/1:4,1:5:0.42:1,0,0	0/0:14,0:14:42.11:0,42,475	0/0:21,0:21:60.17:0,60,699	0/0:13,0:13:36:0,36,400	0/0:17,0:17:45.12:0,45,520	1/1:17,14:32:84.02:1090,84,0	1/1:13,15:29:79.44:1036,79,0	1/1:3,1:4:12.04:173,12,0
chr10	80138265	.	TTG	T	663.33	PASS	AB=0.971;AC=18;AF=0.321;AN=56;BaseQRankSum=1.841;DP=487;FS=0.920;HRun=0;HaplotypeScore=128.1950;InbreedingCoeff=-0.1604;MQ=66.71;MQ0=1;MQRankSum=3.863;QD=2.39;ReadPosRankSum=-9.114;VQSLOD=0.0833;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:8:7.46:32,0,7	0/1:4,1:5:10.25:16,0,10	0/0:25,0:21:45.93:0,46,585	0/0:22,0:19:46.84:0,47,623	0/1:18,1:19:16.45:89,0,16	0/1:13,0:14:25.76:32,0,26	0/0:21,0:21:60.18:0,60,982	0/1:30,1:31:6:202,0,6	0/0:11,0:11:12.53:0,13,58	0/1:21,2:23:29.55:95,0,30	0/1:16,0:15:18.99:19,0,42	0/0:12,0:12:36.10:0,36,592	0/1:11,0:11:37.69:38,0,163	0/0:17,0:17:50.76:0,51,734	0/1:17,1:18:28.84:36,0,29	0/0:19,0:19:57.17:0,57,957	0/0:11,0:11:32.32:0,32,546	0/1:9,0:9:17.22:17,0,25	0/1:20,0:19:64.16:64,0,80	0/1:30,1:31:18.63:19,0,47	1/1:5,1:6:5.83:40,6,0	0/0:16,0:16:48.12:0,48,749	0/0:22,0:22:63.19:0,63,1097	0/0:16,0:16:44.98:0,45,654	0/0:17,0:17:51.14:0,51,780	0/1:31,0:31:41.47:63,0,41	0/1:31,0:29:30.42:57,0,30	1/1:5,0:5:2.28:9,2,0
chr10	80138266	.	TG	T	4600.89	PASS	AB=0.917;AC=33;AF=0.589;AN=56;BaseQRankSum=13.615;DP=486;FS=6.027;HRun=1;HaplotypeScore=106.9741;InbreedingCoeff=0.9017;MQ=66.76;MQ0=1;MQRankSum=-8.501;QD=16.03;ReadPosRankSum=-3.387;VQSLOD=3.6956;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:17.76:87,18,0	1/1:5,0:5:13.29:67,13,0	0/0:25,0:21:53.09:0,53,576	0/0:21,0:19:46.80:0,47,516	1/1:17,2:19:45.53:329,46,0	1/1:13,1:14:35.39:185,35,0	0/0:21,0:21:60.12:0,60,804	1/1:24,6:30:78.78:664,79,0	1/1:11,0:11:21.02:102,21,0	1/1:21,2:23:61.74:421,62,0	1/1:14,2:15:35.33:222,35,0	0/0:12,0:12:36.11:0,36,487	0/1:10,1:11:23.59:24,0,88	0/0:18,0:18:53.76:0,54,643	1/1:15,3:18:40.38:289,40,0	0/0:19,0:19:57.16:0,57,769	0/0:11,0:11:32.32:0,32,436	1/1:7,2:9:12.77:148,13,0	1/1:17,3:19:29.33:279,29,0	1/1:26,4:30:76.16:538,76,0	1/1:6,0:6:6.40:41,6,0	0/0:17,0:17:51.11:0,51,644	0/0:21,0:21:63.19:0,63,880	0/0:16,0:16:44.98:0,45,549	0/0:17,0:17:51.15:0,51,676	1/1:26,5:31:83.99:591,84,0	1/1:26,5:29:74.67:478,75,0	1/1:2,3:5:14.61:138,15,0
chr10	80138284	.	G	GT	7475.86	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=6.491;DP=443;FS=15.817;HRun=6;HaplotypeScore=80.5373;InbreedingCoeff=0.9625;MQ=65.86;MQ0=1;MQRankSum=-8.269;QD=29.78;ReadPosRankSum=-2.371;VQSLOD=2.9191;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:10:17.97:191,18,0	1/1:3,3:6:15.04:180,15,0	0/0:18,0:14:29.54:0,30,279	0/0:18,0:17:17.71:0,18,233	1/1:2,13:15:42.12:516,42,0	1/1:2,14:16:42.13:528,42,0	0/0:20,0:20:48.08:0,48,482	1/1:3,17:20:51.63:641,52,0	1/1:0,11:11:27.08:332,27,0	1/1:2,18:20:51.16:641,51,0	1/1:3,14:17:39.08:473,39,0	0/0:14,0:14:36.08:0,36,367	1/1:1,9:10:24.08:301,24,0	0/0:18,0:18:51.10:0,51,513	1/1:3,10:13:33.10:403,33,0	0/0:17,0:17:42.09:0,42,429	0/0:14,0:14:39.09:0,39,398	1/1:3,7:10:2.30:169,2,0	1/1:5,9:13:27.07:340,27,0	1/1:6,21:27:62.69:758,63,0	1/1:1,6:7:15.05:185,15,0	0/0:15,0:15:45.08:0,45,451	0/0:25,0:25:72.16:0,72,734	0/0:16,0:16:42.09:0,42,428	0/0:16,0:16:42.09:0,42,429	1/1:1,23:24:69.22:867,69,0	1/1:7,19:26:63.15:763,63,0	1/1:0,5:5:15.05:189,15,0
chr10	80138382	.	CTTTTTTTTTT	C	12542.43	PASS	AB=0.601;AC=32;AF=0.571;AN=56;BaseQRankSum=8.513;DP=470;FS=3.533;HRun=10;HaplotypeScore=138.2345;InbreedingCoeff=0.8440;MQ=70.45;MQ0=7;MQRankSum=-8.718;QD=47.87;ReadPosRankSum=1.840;VQSLOD=2.3062;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:3,3:6:65.60:258,0,66	1/1:5,1:6:18.02:284,18,0	0/0:39,0:17:47.93:0,48,1165	0/0:21,0:8:13.12:0,13,295	1/1:0,26:26:63.48:1431,63,0	1/1:0,25:25:27.09:872,27,0	0/0:16,0:16:48.14:0,48,1936	1/1:0,13:13:38.98:458,39,0	1/1:0,16:16:18.06:555,18,0	1/1:12,7:19:57.07:1073,57,0	1/1:16,4:20:56.53:816,57,0	0/0:9,0:9:27.07:0,27,1177	1/1:0,14:14:21.07:643,21,0	0/0:22,0:23:66.19:0,66,2906	1/1:0,15:15:23.76:736,24,0	0/0:11,0:11:33.11:0,33,1579	0/0:15,0:18:48.16:0,48,2122	1/1:6,3:9:23.97:408,24,0	0/1:2,13:15:77.37:450,0,77	1/1:1,19:20:50.98:1070,51,0	1/1:5,1:6:14.94:213,15,0	0/0:17,0:17:51.14:0,51,2215	0/0:20,0:21:63.19:0,63,2776	0/0:13,0:13:39.13:0,39,1857	0/0:3,0:18:27.08:0,27,1135	1/1:0,11:11:30.03:601,30,0	1/1:9,20:27:81.25:1993,81,0	1/1:0,12:12:21.07:682,21,0
chr10	80138393	.	CT	C	950.25	PASS	AB=0.897;AC=28;AF=0.500;AN=56;BaseQRankSum=9.785;DP=474;FS=1.057;HRun=13;HaplotypeScore=110.2351;InbreedingCoeff=0.4759;MQ=68.15;MQ0=7;MQRankSum=-8.796;QD=3.16;ReadPosRankSum=5.229;VQSLOD=0.4111;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,2:5:10.87:54,11,0	1/1:3,1:4:2.88:15,3,0	0/1:44,0:18:16.92:17,0,93	0/0:23,0:9:11.77:0,12,84	1/1:11,16:27:38.33:204,38,0	0/1:25,1:26:7.91:14,0,8	0/0:14,0:15:28.02:0,28,246	1/1:11,0:12:2.22:7,2,0	1/1:12,5:17:13.65:74,14,0	1/1:9,7:16:12.07:101,12,0	0/1:6,4:10:3.95:41,0,4	0/0:9,0:9:21:0,21,195	1/1:9,6:15:15.49:83,15,0	0/1:17,3:20:10.65:11,0,218	1/1:8,7:15:18.40:100,18,0	0/1:16,2:18:13.94:14,0,259	0/0:16,0:16:38.76:0,39,351	1/1:3,3:6:8.08:48,8,0	0/1:13,0:14:1.94:2,0,15	1/1:12,6:21:24.36:113,24,0	0/0:4,0:4:0.47:0,0,1	0/0:18,0:18:31.62:0,32,300	0/0:27,0:27:15:0,15,414	0/0:14,0:14:27.04:0,27,263	0/0:19,0:19:3.35:0,3,194	0/0:14,0:14:11.41:0,11,61	1/1:11,19:28:45.10:241,45,0	0/0:12,1:13:0.25:0,0,37
chr10	80138677	.	AT	A	6793.49	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=13.459;DP=473;FS=14.449;HRun=9;HaplotypeScore=57.2572;InbreedingCoeff=0.9861;MQ=71.98;MQ0=0;MQRankSum=-3.001;QD=22.72;ReadPosRankSum=0.130;VQSLOD=4.2271;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,12:15:33:302,33,0	1/1:2,7:9:21.01:192,21,0	0/0:9,0:9:14.94:0,15,154	0/0:10,0:10:21.01:0,21,222	1/1:2,23:25:50.85:440,51,0	1/1:1,8:9:24.01:220,24,0	0/0:13,0:13:39.10:0,39,440	1/1:4,22:26:66:594,66,0	1/1:0,5:5:12.01:110,12,0	1/1:0,26:26:78.04:713,78,0	1/1:1,22:23:60.02:549,60,0	0/0:9,0:9:21.06:0,21,242	1/1:1,16:17:39.02:357,39,0	0/0:17,0:17:51.15:0,51,584	1/1:0,14:14:42.02:384,42,0	0/0:17,1:18:23.68:0,24,527	0/0:24,0:24:66.13:0,66,745	1/1:4,13:17:36.02:329,36,0	1/1:3,10:13:30:270,30,0	1/1:1,29:30:87.05:796,87,0	1/1:0,5:5:15.01:137,15,0	0/0:16,0:16:45.12:0,45,511	0/0:25,0:25:66.14:0,66,737	0/0:13,0:13:36.11:0,36,415	0/0:20,0:20:57.16:0,57,649	1/1:0,17:17:51.03:466,51,0	1/1:4,36:40:86.96:796,87,0	1/1:0,8:8:15.01:137,15,0
chr10	80139208	.	A	AT	882.78	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.140;DP=596;FS=0.744;HRun=6;HaplotypeScore=72.9782;InbreedingCoeff=0.9931;MQ=79.74;MQ0=0;MQRankSum=-3.424;QD=29.43;ReadPosRankSum=0.003;VQSLOD=4.1169;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:78.25:978,78,0	0/0:13,0:13:36.06:0,36,360	0/0:17,0:17:33.07:0,33,336	0/0:11,0:11:23.83:0,24,223	0/0:29,0:29:80.84:0,81,799	0/0:19,0:19:54.08:0,54,531	0/0:15,0:15:39.07:0,39,391	0/0:26,0:26:66.15:0,66,673	0/0:17,0:17:42.07:0,42,416	0/0:28,0:28:78.61:0,79,781	0/0:22,0:22:60.05:0,60,598	0/0:17,0:17:48.11:0,48,490	0/0:17,0:17:48.07:0,48,480	0/0:25,0:25:63.13:0,63,636	0/0:23,0:23:63.13:0,63,636	0/0:16,0:16:45.08:0,45,447	0/0:16,0:16:45.02:0,45,438	0/0:26,0:26:75.10:0,75,741	0/0:27,0:27:69.12:0,69,691	0/0:28,0:28:75.10:0,75,741	0/0:7,0:7:21.05:0,21,214	0/0:21,0:21:60.12:0,60,605	0/0:32,0:32:90.13:0,90,887	0/0:20,0:20:54.05:0,54,522	0/0:26,0:26:66.12:0,66,662	0/0:27,0:27:69.13:0,69,696	0/0:29,0:29:75.14:0,75,757	0/0:12,0:12:33.07:0,33,336
chr10	80139514	.	TAC	T	10281.66	PASS	AB=0.531;AC=33;AF=0.589;AN=56;BaseQRankSum=14.748;DP=636;FS=2.868;HRun=0;HaplotypeScore=106.9894;InbreedingCoeff=0.9334;MQ=68.93;MQ0=7;MQRankSum=-0.138;QD=27.64;ReadPosRankSum=2.622;VQSLOD=6.3575;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:31:69.07:826,69,0	1/1:4,8:12:27.09:343,27,0	0/0:26,0:16:17.08:0,17,430	0/0:35,0:27:53.68:0,54,689	1/1:2,31:34:82.14:1006,82,0	1/1:3,12:15:33.11:420,33,0	0/0:23,0:23:63.20:0,63,1028	1/1:6,25:31:72.17:862,72,0	1/1:0,13:13:24.08:302,24,0	1/1:1,17:18:51.16:645,51,0	1/1:4,12:16:33.11:420,33,0	0/0:21,0:21:48.16:0,48,800	1/1:1,20:21:54.17:687,54,0	0/0:34,0:34:96.31:0,96,1579	1/1:2,15:17:36.11:456,36,0	0/0:16,0:16:45.15:0,45,742	0/0:29,0:29:78.27:0,78,1302	1/1:1,15:16:36.11:456,36,0	1/1:5,10:15:27.04:322,27,0	1/1:4,14:18:42.13:529,42,0	1/1:6,49:55:99:1297,105,0	0/0:15,0:15:33.11:0,33,540	0/0:17,0:17:39.12:0,39,626	0/0:25,0:25:72.25:0,72,1192	0/0:23,0:23:60.21:0,60,999	1/1:6,27:33:81.24:1015,81,0	0/1:2,15:17:8:454,0,8	1/1:3,6:8:20.90:243,21,0
chr10	80141760	.	TTA	T	9741.12	PASS	AB=0.889;AC=35;AF=0.625;AN=56;BaseQRankSum=7.883;DP=433;FS=1.451;HRun=0;HaplotypeScore=55.6478;InbreedingCoeff=0.8611;MQ=69.27;MQ0=1;MQRankSum=-0.107;QD=30.54;ReadPosRankSum=0.676;VQSLOD=5.8978;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:15:39.12:497,39,0	1/1:0,7:6:15.05:191,15,0	0/0:6,0:6:5.95:0,6,69	0/0:10,0:8:5.22:0,5,35	1/1:4,27:31:81.14:977,81,0	1/1:1,9:10:24.08:306,24,0	0/1:7,1:8:14.12:14,0,327	1/1:3,26:29:78.23:966,78,0	1/1:1,18:19:48.15:611,48,0	1/1:1,21:22:63.17:774,63,0	1/1:1,30:31:87.11:1034,87,0	0/0:15,0:15:39.13:0,39,653	1/1:1,11:12:33.10:415,33,0	0/0:12,0:12:36.12:0,36,602	1/1:2,19:21:57.15:708,57,0	0/0:9,0:9:24.08:0,24,402	0/0:22,1:23:18.97:0,19,819	1/1:3,9:12:4.32:247,4,0	1/1:3,8:11:24.06:291,24,0	1/1:4,17:21:48.11:593,48,0	1/1:1,12:13:27.09:344,27,0	0/0:5,0:5:15.05:0,15,238	0/0:13,0:13:30.10:0,30,502	0/0:5,0:5:12.04:0,12,201	0/0:1,0:15:27.01:0,27,240	1/1:2,23:25:72.22:904,72,0	1/1:3,13:17:32.94:396,33,0	1/1:1,13:15:38.96:472,39,0
chr10	80142443	.	CACACAT	C	14655.33	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=14.320;DP=457;FS=0.387;HRun=0;HaplotypeScore=103.6904;InbreedingCoeff=0.9655;MQ=53.40;MQ0=0;MQRankSum=-13.040;QD=48.21;ReadPosRankSum=-1.238;VQSLOD=4.6521;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:24.08:487,24,0	1/1:0,12:12:27.09:548,27,0	0/0:12,0:8:18.90:0,19,309	0/0:7,0:3:2.96:0,3,19	1/1:0,24:24:45.15:925,45,0	1/1:0,18:18:36.12:806,36,0	0/0:9,0:9:27.05:0,27,699	1/1:0,22:22:66.15:1255,66,0	1/1:0,18:18:30.10:694,30,0	1/1:0,21:21:60.14:1197,60,0	1/1:1,17:18:39.13:865,39,0	0/0:25,0:25:75.24:0,75,2500	1/1:0,22:22:45.15:967,45,0	0/0:20,0:20:60.19:0,60,2042	1/1:0,14:14:30.10:642,30,0	0/0:17,0:17:48.14:0,48,1605	0/0:6,0:6:18.04:0,18,536	1/1:1,12:13:24.08:558,24,0	1/1:0,13:13:39.09:744,39,0	1/1:0,22:22:54.19:1127,54,0	1/1:0,5:5:12.04:254,12,0	0/0:11,0:11:33.11:0,33,1059	0/0:17,0:17:51.13:0,51,1550	0/0:6,0:6:18.06:0,18,597	0/0:23,0:23:69.21:0,69,2255	1/1:0,31:31:81.20:1809,81,0	1/1:1,28:29:57.19:1317,57,0	1/1:0,8:8:21.07:459,21,0
chr10	80145108	.	GCACACA	G	3092.45	PASS	AB=0.723;AC=30;AF=0.625;AN=48;BaseQRankSum=6.846;DP=494;FS=4.049;HRun=0;HaplotypeScore=138.6587;InbreedingCoeff=0.6826;MQ=60.11;MQ0=9;MQRankSum=-7.710;QD=11.25;ReadPosRankSum=0.793;VQSLOD=2.8966;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,4:30:4.26:124,4,0	1/1:2,0:8:3.51:21,4,0	./.	./.	1/1:5,8:16:8.55:114,9,0	1/1:17,6:25:21.06:362,21,0	0/0:15,0:16:30.10:0,30,799	./.	1/1:10,4:15:18.04:300,18,0	1/1:10,3:13:6.63:178,7,0	1/1:8,7:14:6.01:61,6,0	0/0:4,0:7:9.03:0,9,143	0/0:12,0:12:21.07:0,21,477	0/1:15,0:19:12.62:13,0,742	1/1:6,5:11:15.05:276,15,0	0/0:13,0:14:20.21:0,20,629	0/0:21,0:22:29.23:0,29,787	0/1:5,5:13:31.79:190,0,32	1/1:12,0:14:6.02:84,6,0	1/1:10,7:18:15.02:265,15,0	./.	0/0:11,0:12:18.06:0,18,488	0/0:17,1:21:21.07:0,21,552	0/0:19,0:20:24.08:0,24,611	1/1:16,16:35:36.12:646,36,0	1/1:14,3:17:9.03:182,9,0	1/1:12,3:15:12.02:206,12,0	1/1:3,4:8:14.72:254,15,0
chr10	80145547	.	GT	G	8616.42	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=10.099;DP=584;FS=9.605;HRun=9;HaplotypeScore=57.8964;InbreedingCoeff=0.9706;MQ=66.21;MQ0=2;MQRankSum=-0.451;QD=21.65;ReadPosRankSum=2.092;VQSLOD=5.3227;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,31:36:89.08:801,89,0	1/1:3,9:12:30.01:274,30,0	0/0:22,0:16:19.89:0,20,244	0/0:20,0:14:29.98:0,30,296	1/1:2,23:25:62.91:557,63,0	1/1:1,26:27:69.04:631,69,0	0/0:12,1:13:2.62:0,3,284	1/1:7,19:26:56.96:507,57,0	1/1:2,17:19:42.02:384,42,0	1/1:5,19:24:54.01:489,54,0	1/1:3,18:21:53.98:486,54,0	0/0:17,0:17:42.12:0,42,485	1/1:2,14:16:36.01:329,36,0	0/0:17,0:17:45.13:0,45,519	1/1:2,14:16:33.01:302,33,0	0/0:19,0:19:57.15:0,57,640	0/0:24,0:24:63.07:0,63,695	1/1:1,16:17:48.03:439,48,0	1/1:1,18:19:51:467,51,0	1/1:3,20:23:60:541,60,0	1/1:1,8:9:21.01:192,21,0	0/0:15,0:15:42.11:0,42,474	0/0:20,0:20:54.15:0,54,615	0/0:18,0:19:47.97:0,48,534	1/1:5,30:35:75.04:685,75,0	1/1:6,19:25:53.98:488,54,0	1/1:4,18:22:48.02:439,48,0	1/1:2,24:26:66.03:604,66,0
chr10	80146172	.	GA	G	630.84	PASS	AC=24;AF=0.480;AN=50;BaseQRankSum=-0.837;DP=134;FS=10.066;HRun=2;HaplotypeScore=23.6317;InbreedingCoeff=0.7234;MQ=74.70;MQ0=0;MQRankSum=2.187;QD=12.62;ReadPosRankSum=-0.883;VQSLOD=0.6943;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:23.88:0,24,192	./.	0/0:8,0:7:20.24:0,20,182	0/0:11,0:10:7.34:0,7,119	1/1:6,0:6:5.99:48,6,0	1/1:1,0:1:3:26,3,0	0/0:7,0:7:18:0,18,197	1/1:0,5:5:15.01:149,15,0	1/1:8,0:8:6.78:70,7,0	1/1:1,0:1:3:27,3,0	1/1:3,0:3:6:53,6,0	0/0:4,1:5:11.43:0,11,80	0/0:8,0:8:14.73:0,15,189	0/0:4,0:4:4.54:0,5,83	1/1:2,0:2:1.33:24,1,0	0/0:9,0:9:27.05:0,27,303	0/0:3,0:3:8.97:0,9,70	1/1:4,3:7:14.57:149,15,0	1/1:5,0:5:15:129,15,0	1/1:3,0:3:6:50,6,0	1/1:5,0:6:8.85:59,9,0	0/0:4,0:4:8.68:0,9,64	0/0:2,0:2:6.01:0,6,61	0/0:9,0:9:20.91:0,21,199	0/0:4,0:4:11.98:0,12,99	./.	1/1:3,0:3:3.58:30,4,0	./.
chr10	80147276	.	GA	G	12814.55	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=15.572;DP=747;FS=1.248;HRun=7;HaplotypeScore=71.8598;InbreedingCoeff=0.9985;MQ=83.24;MQ0=0;MQRankSum=-0.722;QD=27.56;ReadPosRankSum=2.719;VQSLOD=5.6383;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:75.17:765,75,0	1/1:0,13:13:36.08:367,36,0	0/0:31,0:31:62.40:0,62,776	0/0:13,0:12:24.07:0,24,283	1/1:3,32:35:93.21:948,93,0	1/1:1,31:32:84.19:857,84,0	0/0:26,0:26:72.23:0,72,906	1/1:4,32:36:93.16:927,93,0	1/1:2,24:26:69.15:704,69,0	1/1:5,34:39:99:1039,102,0	1/1:2,20:22:54.11:551,54,0	0/0:30,0:30:81.25:0,81,1008	1/1:0,25:25:66.14:666,66,0	0/0:23,0:23:69.21:0,69,857	1/1:0,34:34:96.22:979,96,0	0/0:31,0:31:90.26:0,90,1106	0/0:25,0:25:72.22:0,72,893	1/1:1,7:8:18.04:184,18,0	1/1:1,28:29:84.10:820,84,0	1/1:5,43:48:99:1284,126,0	1/1:1,27:28:78.17:796,78,0	0/0:25,0:25:72.23:0,72,905	0/0:33,0:33:84.25:0,84,1032	0/0:22,0:22:63.20:0,63,793	0/0:23,0:23:63.20:0,63,782	1/1:1,21:22:63.14:642,63,0	1/1:0,23:23:69.16:704,69,0	1/1:0,19:19:57.13:581,57,0
chr10	80148033	.	AAT	A	192	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.404;DP=477;FS=3.453;HRun=0;HaplotypeScore=55.7973;InbreedingCoeff=0.9663;MQ=74.41;MQ0=1;MQRankSum=0.481;QD=21.33;ReadPosRankSum=-0.191;VQSLOD=3.5121;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:30.10:0,30,526	0/0:7,0:7:18.06:0,18,316	0/0:13,0:13:33.03:0,33,478	0/0:9,0:9:20.94:0,21,298	0/0:21,0:21:63.21:0,63,1089	0/0:18,0:18:51.16:0,51,855	0/0:13,0:13:33.11:0,33,578	0/0:26,0:26:75.25:0,75,1274	0/0:14,0:14:42.14:0,42,736	0/0:22,0:22:63.22:0,63,1097	0/0:25,0:25:66.21:0,66,1120	0/0:14,0:14:33.11:0,33,563	0/0:16,0:16:48.16:0,48,828	0/0:9,0:9:27.09:0,27,469	0/0:21,0:21:60.19:0,60,1019	0/0:17,0:17:51.16:0,51,866	0/0:20,0:20:57.18:0,57,971	0/0:21,0:20:48.16:0,48,810	0/0:20,0:20:45.15:0,45,775	0/0:24,0:24:69.24:0,69,1197	0/0:20,0:20:57.20:0,57,999	0/0:13,0:13:36.12:0,36,616	0/0:25,0:25:69.22:0,69,1181	0/0:6,0:6:15.05:0,15,263	1/1:2,7:9:21.07:284,21,0	0/0:15,0:15:39.13:0,39,684	0/0:30,0:30:78.27:0,78,1336	0/0:18,0:18:36.59:0,37,631
chr10	80148347	.	CGT	C	763.40	PASS	AB=0.879;AC=16;AF=0.286;AN=56;BaseQRankSum=9.750;DP=707;FS=0.000;HRun=0;HaplotypeScore=94.1409;InbreedingCoeff=-0.2661;MQ=59.16;MQ0=11;MQRankSum=2.391;QD=2.07;ReadPosRankSum=1.913;VQSLOD=1.8030;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,3:33:49.43:49,0,678	0/0:5,0:5:12.04:0,12,190	0/0:31,0:18:12.12:0,12,299	0/0:34,0:18:37.01:0,37,545	0/0:28,0:29:68.86:0,69,964	0/1:28,2:30:10.41:10,0,770	0/0:35,3:38:7.15:0,7,1011	0/0:26,0:26:42.12:0,42,603	0/0:19,0:19:0.23:0,0,616	0/0:34,2:35:4.13:0,4,986	0/1:17,3:20:28.94:29,0,494	0/0:23,1:24:18.66:0,19,765	1/1:4,0:22:28.41:140,28,0	0/0:24,0:24:45.15:0,45,701	0/1:23,2:25:16.78:17,0,695	0/0:22,1:23:24.70:0,25,844	0/1:22,3:25:33.90:34,0,597	0/1:9,3:13:47.10:47,0,186	0/0:26,0:25:27.05:0,27,387	0/1:21,2:24:45.75:46,0,386	0/1:39,5:42:99:114,0,1107	0/0:23,1:24:12.60:0,13,636	0/1:25,4:29:43.45:43,0,753	0/1:24,5:29:72.93:73,0,820	0/1:12,1:13:14.48:14,0,262	0/1:21,6:27:99:136,0,562	0/1:18,4:22:93.88:94,0,496	0/1:9,3:11:76.55:77,0,303
chr10	80148805	.	C	CG	844.13	PASS	AC=34;AF=0.680;AN=50;BaseQRankSum=-1.627;DP=318;FS=9.919;HRun=0;HaplotypeScore=101.7737;InbreedingCoeff=0.7135;MQ=32.11;MQ0=23;MQRankSum=-1.430;QD=3.70;ReadPosRankSum=-1.279;VQSLOD=2.2922;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,2:14:8.91:66,9,0	1/1:6,3:6:4.19:20,4,0	./.	./.	1/1:11,3:12:8.30:51,8,0	1/1:9,0:6:2.98:24,3,0	0/0:13,0:13:14.90:0,15,113	1/1:12,3:13:0.38:82,0,0	./.	1/1:15,1:14:10.76:56,11,0	1/1:17,2:17:14.58:100,15,0	0/0:8,0:8:17.71:0,18,125	1/1:3,0:2:5.34:21,5,0	0/0:10,0:9:8.94:0,9,69	1/1:8,1:7:5.91:43,6,0	0/0:11,0:11:20.95:0,21,182	0/0:21,0:19:26.65:0,27,205	1/1:4,0:3:5.96:45,6,0	1/1:13,2:10:9.03:47,9,0	1/1:18,3:14:17.96:111,18,0	1/1:7,0:4:5.99:50,6,0	0/0:6,0:6:9.01:0,9,84	0/0:12,0:10:17.96:0,18,156	0/0:5,0:5:9.88:0,10,80	1/1:12,2:14:23.44:135,23,0	1/1:13,1:8:5.79:33,6,0	1/1:16,3:16:20.29:120,20,0	1/1:22,1:9:2.96:19,3,0
chr10	80148837	.	A	ACC	59.86	PASS	AB=1.000;AC=4;AF=0.074;AN=54;BaseQRankSum=-0.688;DP=447;FS=0.000;HRun=0;HaplotypeScore=107.3660;InbreedingCoeff=0.4311;MQ=43.05;MQ0=44;MQRankSum=-1.129;QD=1.09;ReadPosRankSum=-2.548;VQSLOD=1.5847;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:18:39.03:0,39,436	0/0:7,0:5:11.25:0,11,118	0/1:24,0:8:9.98:10,0,87	0/0:11,0:3:8.08:0,8,102	0/0:21,0:17:30.09:0,30,382	0/0:11,0:7:15.05:0,15,186	0/0:13,0:11:15.01:0,15,170	0/0:34,0:25:48.54:0,49,626	0/0:12,0:9:15.05:0,15,196	0/0:23,0:21:42.11:0,42,529	0/0:19,0:15:36.10:0,36,462	0/0:14,0:11:33.09:0,33,392	1/1:7,7:12:15.82:146,16,0	0/0:10,0:9:27.09:0,27,354	0/0:11,0:10:30.09:0,30,365	0/0:8,0:7:21.07:0,21,291	0/0:24,0:20:50.18:0,50,613	0/0:9,0:8:15.05:0,15,189	0/1:17,0:11:5.28:5,0,291	0/0:13,0:8:21.07:0,21,270	./.	0/0:5,0:5:15.04:0,15,210	0/0:12,0:11:30.93:0,31,371	0/0:8,0:7:18.06:0,18,229	0/0:18,0:16:45.15:0,45,594	0/0:26,0:18:51.12:0,51,628	0/0:16,0:13:26.75:0,27,338	0/0:39,0:9:12.01:0,12,111
chr10	80150085	.	AGAGAGAGG	A	1868.87	PASS	AB=0.922;AC=32;AF=0.640;AN=50;BaseQRankSum=5.289;DP=417;FS=4.733;HRun=0;HaplotypeScore=128.4076;InbreedingCoeff=0.4144;MQ=46.16;MQ0=31;MQRankSum=-2.830;QD=6.47;ReadPosRankSum=-0.379;VQSLOD=2.3353;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:14:1.26:34,1,0	1/1:9,0:8:17.92:142,18,0	./.	./.	1/1:4,13:15:8.85:56,9,0	1/1:22,0:20:16.06:182,16,0	0/1:16,0:13:4.28:4,0,84	1/1:33,0:31:36.70:370,37,0	0/1:2,16:17:0:0,0,0	1/1:17,0:16:11.27:339,11,0	./.	0/0:16,0:14:16.21:0,16,279	1/1:8,0:5:4.66:14,5,0	0/0:17,0:17:26.29:0,26,520	0/0:3,20:23:1.64:0,2,5	0/1:10,0:8:17.85:18,0,109	0/0:29,0:26:18.58:0,19,555	0/1:11,0:11:18.54:155,0,19	1/1:12,0:11:20.81:194,21,0	1/1:18,0:18:0.53:30,1,0	0/1:12,0:8:3.07:46,0,3	0/0:12,0:11:8.90:0,9,63	0/1:19,0:19:3.30:3,0,40	0/0:15,0:14:26.99:0,27,546	1/1:15,0:14:8.81:73,9,0	1/1:15,1:14:32.89:323,33,0	1/1:16,0:16:4.33:23,4,0	1/1:4,0:2:2.99:24,3,0
chr10	80150087	.	AGAGAGG	A	1969.50	PASS	AB=1.000;AC=33;AF=0.688;AN=48;BaseQRankSum=5.048;DP=410;FS=3.702;HRun=0;HaplotypeScore=118.5366;InbreedingCoeff=0.5072;MQ=46.09;MQ0=31;MQRankSum=-2.341;QD=7.38;ReadPosRankSum=-0.799;VQSLOD=1.9409;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:15:0.61:33,1,0	1/1:9,0:8:17.92:142,18,0	./.	./.	1/1:17,0:15:8.85:56,9,0	1/1:19,0:17:16.56:182,17,0	0/1:16,0:13:4.44:4,0,84	1/1:32,0:30:44.54:394,45,0	./.	1/1:17,0:16:22.21:301,22,0	./.	0/0:16,0:14:16.54:0,17,202	1/1:8,0:5:4.66:14,5,0	0/0:16,0:16:25.98:0,26,444	0/0:23,0:23:1.65:0,2,4	0/1:11,0:9:39.80:40,0,106	0/0:29,0:26:18.15:0,18,444	1/1:11,0:11:0.99:137,1,0	1/1:3,8:10:20.95:248,21,0	1/1:3,15:18:0.72:30,1,0	1/1:12,0:8:9:97,9,0	0/0:12,0:11:8.90:0,9,63	0/1:17,0:17:3.30:3,0,40	0/0:16,0:15:26.86:0,27,392	1/1:16,0:15:11.44:99,11,0	1/1:16,0:14:32.89:303,33,0	1/1:2,14:16:4.51:23,5,0	1/1:4,0:2:2.99:24,3,0
chr10	80151307	.	C	CTGGCCCGTAGCTAGACCAGC	42096.04	PASS	AB=0.786;AC=53;AF=0.981;AN=54;BaseQRankSum=-5.267;DP=414;FS=23.888;HRun=0;HaplotypeScore=477.1007;InbreedingCoeff=-0.0380;MQ=61.57;MQ0=0;MQRankSum=0.505;QD=101.93;ReadPosRankSum=2.202;VQSLOD=3.7808;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:50.13:2405,50,0	1/1:14,0:14:39.73:1900,40,0	1/1:4,0:7:21.03:997,21,0	0/1:8,1:11:9.89:1009,0,10	1/1:26,0:26:36.12:2027,36,0	1/1:12,0:12:28.84:1195,29,0	1/1:16,0:16:2.34:1109,2,0	1/1:14,0:14:42.13:1550,42,0	1/1:14,0:14:37.11:1553,37,0	1/1:20,0:20:52.82:3109,53,0	1/1:17,0:17:6.92:1090,7,0	1/1:15,0:15:39.23:1360,39,0	1/1:12,0:12:12.77:1387,13,0	1/1:6,0:6:13.53:932,14,0	1/1:16,0:16:29.90:1454,30,0	1/1:20,0:20:46.60:2123,47,0	1/1:12,0:12:24.08:1334,24,0	1/1:1,0:1:3.01:204,3,0	1/1:8,0:8:20.08:712,20,0	1/1:35,0:35:73.55:3108,74,0	1/1:16,0:16:24.04:798,24,0	1/1:14,0:14:25.46:1224,25,0	1/1:18,0:18:34.53:1199,35,0	1/1:8,0:8:12.04:399,12,0	1/1:15,0:15:39.13:2176,39,0	1/1:18,0:18:50.48:2301,50,0	1/1:27,0:27:17.56:3438,18,0	./.
chr10	80151308	.	T	TGGCCCGTAGCTAGACCTCGGT	50535.79	PASS	AB=0.909;AC=52;AF=0.929;AN=56;BaseQRankSum=-6.215;DP=406;FS=11.940;HRun=0;HaplotypeScore=445.9186;InbreedingCoeff=0.2001;MQ=55.17;MQ0=0;MQRankSum=0.046;QD=124.78;ReadPosRankSum=1.498;VQSLOD=3.5719;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:45.97:2950,46,0	1/1:14,0:14:39.61:2400,40,0	1/1:1,0:4:12.04:685,12,0	0/1:7,1:9:15.91:563,0,16	1/1:26,0:26:41.70:2686,42,0	1/1:11,0:11:20.81:1571,21,0	1/1:16,0:16:26.81:1308,27,0	1/1:14,0:14:42.13:1861,42,0	1/1:14,0:14:29.12:1799,29,0	1/1:20,0:20:53.62:3788,54,0	0/1:17,0:17:7.52:1448,0,8	1/1:15,0:15:39.27:1788,39,0	1/1:12,0:12:2.76:1606,3,0	1/1:6,0:6:15.94:1206,16,0	1/1:16,0:16:29.53:1735,30,0	1/1:20,0:20:31.56:2455,32,0	1/1:12,0:12:24.08:1576,24,0	1/1:1,0:1:3.01:276,3,0	1/1:8,0:8:21.03:782,21,0	1/1:35,0:35:73.55:3930,74,0	1/1:16,0:16:24.04:872,24,0	1/1:14,0:14:20.15:1522,20,0	1/1:18,0:18:35.22:1653,35,0	1/1:6,0:6:12.04:507,12,0	1/1:15,0:15:39.13:2666,39,0	1/1:18,0:18:50.82:2587,51,0	1/1:27,0:27:22.36:4315,22,0	0/0:1,0:1:2.04:0,2,6
chr10	80152185	.	TCTCC	T	12297.08	PASS	AB=0.917;AC=29;AF=0.518;AN=56;BaseQRankSum=12.225;DP=415;FS=0.388;HRun=0;HaplotypeScore=110.6214;InbreedingCoeff=0.9233;MQ=58.66;MQ0=0;MQRankSum=-7.980;QD=46.76;ReadPosRankSum=0.824;VQSLOD=5.4336;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:14:39.13:707,39,0	1/1:1,11:12:36.12:661,36,0	0/0:15,0:14:30.37:0,30,956	0/0:9,0:8:24.08:0,24,581	1/1:1,25:26:72.24:1269,72,0	0/0:20,0:20:60.21:0,60,1584	0/0:12,0:12:36.12:0,36,910	1/1:3,21:24:63.20:1144,63,0	1/1:0,8:8:24.08:448,24,0	1/1:2,18:20:57.19:1047,57,0	1/1:1,22:23:66.23:1183,66,0	0/0:9,0:9:27.09:0,27,690	1/1:2,11:13:33.11:616,33,0	0/0:17,0:17:51.18:0,51,1322	1/1:1,13:14:39.13:728,39,0	0/0:8,0:8:24.08:0,24,640	0/0:13,0:14:42.14:0,42,1042	1/1:2,5:7:15.05:280,15,0	1/1:5,15:20:42.13:732,42,0	1/1:3,26:29:78.26:1336,78,0	1/1:3,8:11:24.08:445,24,0	0/0:7,0:7:21.06:0,21,506	0/0:10,0:10:30.10:0,30,784	0/0:6,0:6:18.06:0,18,479	0/0:16,0:16:42.13:0,42,1050	0/1:10,1:11:22.89:23,0,742	1/1:1,30:31:90.31:1679,90,0	0/0:9,0:9:24.08:0,24,640
chr10	80152242	.	CATATAT	C	8425.66	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=1.411;DP=339;FS=5.204;HRun=0;HaplotypeScore=108.8763;InbreedingCoeff=0.8595;MQ=61.77;MQ0=0;MQRankSum=-11.140;QD=40.70;ReadPosRankSum=-1.386;VQSLOD=3.9096;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:16:42.14:0,42,550	1/1:2,8:10:24.08:529,24,0	0/1:8,0:5:6.16:6,0,6	0/0:10,0:7:12.29:0,12,98	1/1:6,20:26:54.18:1165,54,0	0/0:2,0:13:24.08:0,24,315	0/0:2,0:2:6.02:0,6,172	1/1:8,20:28:57.08:964,57,0	1/1:3,4:7:9.03:199,9,0	1/1:8,14:22:54.11:1048,54,0	1/1:8,7:15:21.07:466,21,0	0/0:6,0:6:18.06:0,18,603	0/0:3,0:7:20.66:0,21,255	0/0:10,0:10:27.08:0,27,669	1/1:1,8:9:24.08:531,24,0	0/0:5,0:5:6.02:0,6,203	0/0:13,0:15:45.15:0,45,1411	1/1:7,2:9:11.93:171,12,0	1/1:8,6:14:24:402,24,0	1/1:4,20:23:60.19:1285,60,0	1/1:2,3:5:9.03:199,9,0	0/0:2,0:2:6.02:0,6,144	0/0:5,0:5:15.05:0,15,478	0/0:2,0:2:6.02:0,6,205	0/0:0,0:19:39.13:0,39,512	0/0:2,0:15:42.13:0,42,552	1/1:9,21:30:66.23:1460,66,0	0/0:1,0:5:12.04:0,12,157
chr10	80152336	.	AG	A	6964.42	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=10.617;DP=411;FS=28.342;HRun=1;HaplotypeScore=45.2214;InbreedingCoeff=0.9894;MQ=80.38;MQ0=1;MQRankSum=-1.318;QD=38.91;ReadPosRankSum=-0.783;VQSLOD=2.5036;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.22:0,66,1008	1/1:0,6:6:18.06:252,18,0	0/0:16,0:16:25.11:0,25,553	0/0:13,0:13:35.43:0,35,476	1/1:0,20:20:57.10:752,57,0	0/0:20,0:20:54.18:0,54,812	0/0:13,0:13:39.13:0,39,597	1/1:1,24:24:60.16:806,60,0	1/1:0,3:3:9.03:126,9,0	1/1:0,21:21:63.17:842,63,0	1/1:0,15:15:45.15:629,45,0	0/0:8,0:8:24.08:0,24,353	0/0:11,0:11:33.10:0,33,470	0/0:14,0:14:42.12:0,42,599	1/1:0,8:8:24.08:335,24,0	0/0:8,0:8:24.08:0,24,367	0/0:25,0:24:72.24:0,72,1101	1/1:0,24:24:66.22:918,66,0	1/1:0,16:16:45.14:612,45,0	1/1:0,18:18:54.18:754,54,0	1/1:0,11:11:33.11:461,33,0	0/0:10,0:10:30.10:0,30,459	0/0:10,0:10:30.09:0,30,435	0/0:15,0:15:38.94:0,39,595	0/0:21,0:21:48.16:0,48,734	0/0:14,0:14:42.14:0,42,629	1/1:2,10:12:36.11:477,36,0	0/0:11,0:11:33.11:0,33,505
chr10	80152532	.	G	GA	10094.87	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-11.590;DP=480;FS=5.993;HRun=7;HaplotypeScore=43.0843;InbreedingCoeff=0.9946;MQ=72.85;MQ0=0;MQRankSum=-2.327;QD=30.87;ReadPosRankSum=0.988;VQSLOD=5.0497;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:31:72.22:870,72,0	1/1:0,10:10:27.08:326,27,0	0/0:10,0:9:17.73:0,18,197	0/0:9,0:9:18.47:0,18,167	1/1:2,19:21:57.13:672,57,0	1/1:2,17:19:48.15:580,48,0	0/0:28,0:28:72.11:0,72,695	1/1:5,18:23:57.14:654,57,0	1/1:1,12:13:33.10:399,33,0	1/1:0,24:24:72.22:869,72,0	1/1:1,18:19:54.17:652,54,0	0/0:15,0:15:45.07:0,45,435	1/1:0,13:13:39.12:471,39,0	0/0:15,0:15:45.07:0,45,435	1/1:1,17:18:48.15:580,48,0	0/0:9,0:9:27.04:0,27,261	0/0:28,0:28:75.11:0,75,724	1/1:3,15:18:36.11:435,36,0	1/1:2,9:11:27.08:326,27,0	1/1:0,17:17:45.14:543,45,0	1/1:2,13:15:39.12:471,39,0	0/0:13,0:13:36.06:0,36,348	0/0:10,0:10:30.05:0,30,289	0/0:16,0:16:42.07:0,42,406	1/1:1,22:23:51.16:616,51,0	1/1:1,25:26:75.23:906,75,0	1/1:3,17:20:45.14:544,45,0	1/1:0,6:6:15.05:181,15,0
chr10	80152904	.	TCACACACA	T	333.34	PASS	AB=1.000;AC=4;AF=0.074;AN=54;BaseQRankSum=6.020;DP=496;FS=6.453;HRun=0;HaplotypeScore=112.2641;InbreedingCoeff=0.2764;MQ=51.50;MQ0=17;MQRankSum=-5.657;QD=5.75;ReadPosRankSum=-3.122;VQSLOD=0.6263;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:9.03:0,9,231	0/0:10,0:10:2.30:0,2,46	./.	0/0:29,0:10:0:0,0,0	0/0:23,0:23:10.72:0,11,173	0/0:12,0:10:6.02:0,6,246	0/0:15,0:16:11.62:0,12,433	0/0:29,0:27:8.13:0,8,82	0/0:10,0:10:11.40:0,11,138	0/0:18,0:18:21.03:0,21,251	0/0:14,0:14:4.75:0,5,29	0/0:18,0:18:33.10:0,33,891	0/0:8,0:8:17.96:0,18,288	0/0:24,0:24:38.85:0,39,970	0/1:18,0:18:7.26:7,0,60	0/0:11,0:11:15.03:0,15,453	0/0:25,0:27:48.14:0,48,1548	0/0:12,0:10:3.01:0,3,57	0/0:13,0:11:11.96:0,12,128	0/1:26,0:26:76.81:149,0,77	0/0:18,0:14:14.95:0,15,118	0/0:13,0:14:18.06:0,18,574	0/0:17,0:16:6.02:0,6,184	0/0:23,0:23:35.94:0,36,1052	1/1:7,7:14:12.04:280,12,0	0/0:19,0:19:36.12:0,36,1197	0/0:15,0:14:9.99:0,10,153	0/0:7,0:7:15:0,15,327
chr10	80152943	.	CACACACAT	C	1506.08	PASS	AB=0.954;AC=17;AF=0.304;AN=56;BaseQRankSum=2.135;DP=559;FS=4.580;HRun=0;HaplotypeScore=133.3659;InbreedingCoeff=0.0037;MQ=54.88;MQ0=8;MQRankSum=-1.383;QD=5.75;ReadPosRankSum=0.267;VQSLOD=2.4856;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:99:114,0,173	0/1:7,0:7:13.57:14,0,18	0/0:30,0:15:44.94:0,45,424	0/0:29,0:11:26.10:0,26,277	0/1:33,0:33:12.66:13,0,56	0/0:15,0:14:27:0,27,509	0/0:20,0:19:50.52:0,51,857	1/1:18,0:17:1.16:261,1,0	0/1:15,0:15:16.34:16,0,18	0/1:20,0:20:35.91:225,0,36	1/1:20,0:19:3.15:11,3,0	0/0:27,0:27:75.15:0,75,1459	0/0:12,0:11:21.02:0,21,463	0/0:30,0:30:65.96:0,66,1504	0/1:19,1:20:49.47:67,0,49	0/0:13,0:13:33.04:0,33,690	0/0:35,0:35:93.02:0,93,2358	0/1:17,0:15:20.83:143,0,21	0/1:11,0:12:21.38:119,0,21	0/1:10,17:27:7.49:226,0,7	1/1:25,0:23:15.02:246,15,0	0/0:16,0:16:33.10:0,33,810	0/0:12,0:12:21.04:0,21,438	0/0:23,0:23:53.98:0,54,1218	0/1:16,0:16:99:178,0,145	0/0:27,0:27:77.97:0,78,1458	0/1:15,0:14:35.40:37,0,35	0/0:8,0:8:23.79:0,24,432
chr10	80152945	.	CACACAT	C	2095.10	PASS	AB=0.852;AC=25;AF=0.446;AN=56;BaseQRankSum=1.927;DP=565;FS=0.989;HRun=0;HaplotypeScore=118.5862;InbreedingCoeff=0.6757;MQ=58.15;MQ0=8;MQRankSum=-1.995;QD=7.91;ReadPosRankSum=0.395;VQSLOD=2.1917;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:76.30:192,0,76	1/1:2,5:7:3.01:64,3,0	0/0:31,0:17:50.55:0,51,463	0/0:27,0:12:29.08:0,29,298	1/1:9,24:33:3.48:66,3,0	0/0:15,0:14:27:0,27,411	0/0:23,0:22:59.70:0,60,769	1/1:19,0:18:38.73:325,39,0	1/1:5,10:15:3.01:67,3,0	1/1:21,0:21:32.82:309,33,0	1/1:6,14:19:3.48:56,3,0	0/0:27,0:27:60.06:0,60,910	0/0:11,0:10:24.02:0,24,392	0/0:29,0:29:63.08:0,63,1099	0/1:4,16:20:7.95:247,0,8	0/0:13,0:13:33.04:0,33,538	0/0:34,0:34:85.02:0,85,1743	1/1:18,0:16:26.66:197,27,0	1/1:12,0:12:20.80:158,21,0	1/1:25,0:25:12.46:144,12,0	1/1:24,0:22:37.46:294,37,0	0/0:17,0:17:35.98:0,36,516	0/0:13,0:13:23.93:0,24,318	0/0:23,0:23:50.88:0,51,869	0/1:17,0:17:46.24:46,0,168	0/0:29,0:29:83.75:0,84,1193	1/1:6,9:15:6.02:134,6,0	0/0:8,0:8:23.79:0,24,329
chr10	80152949	.	CAT	C	1798.46	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=1.719;DP=523;FS=11.068;HRun=0;HaplotypeScore=83.0301;InbreedingCoeff=0.7118;MQ=63.04;MQ0=7;MQRankSum=-2.972;QD=8.56;ReadPosRankSum=-0.360;VQSLOD=2.2599;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,1:19:17.73:287,18,0	1/1:6,0:6:2.97:20,3,0	0/0:29,0:17:50.94:0,51,477	0/0:30,0:16:37.82:0,38,348	1/1:28,0:28:2.81:20,3,0	0/0:15,0:14:26.99:0,27,286	0/0:22,0:21:51.70:0,52,552	1/1:18,0:17:41.91:355,42,0	1/1:11,0:11:2.98:21,3,0	1/1:17,0:17:24.41:337,24,0	1/1:16,1:17:2.28:9,2,0	0/0:27,0:27:46.86:0,47,524	0/0:10,0:9:9:0,9,202	0/0:26,0:26:46.72:0,47,612	0/1:19,0:19:26.09:63,0,26	0/0:12,0:12:23.17:0,23,322	0/0:34,0:34:49.27:0,49,844	1/1:15,0:15:18.58:226,19,0	1/1:4,7:11:29.02:213,29,0	1/1:19,0:19:11.84:78,12,0	1/1:20,0:18:41.89:338,42,0	0/0:18,0:18:14.63:0,15,260	0/0:11,0:11:3:0,3,121	0/0:22,0:22:56.71:0,57,598	0/0:18,0:18:32.87:0,33,252	0/0:31,0:31:26.03:0,26,613	0/1:10,0:9:14.01:33,0,14	0/0:8,0:8:23.79:0,24,217
chr10	80153199	.	ACTGCGTGCTCC	A	1426.26	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.111;DP=602;FS=2.270;HRun=0;HaplotypeScore=187.3098;InbreedingCoeff=0.9048;MQ=81.21;MQ0=0;MQRankSum=-6.197;QD=83.90;ReadPosRankSum=1.131;VQSLOD=3.4004;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.26:0,75,4011	0/0:21,0:21:63.15:0,63,3088	0/0:20,0:20:60.21:0,60,2879	0/0:15,0:15:42.14:0,42,1898	0/0:27,0:27:81.28:0,81,4217	0/0:21,0:21:60.19:0,60,3035	0/0:14,0:14:36.11:0,36,1661	0/0:22,0:22:66.22:0,66,3194	0/0:21,0:21:63.22:0,63,3656	0/0:26,0:26:78.27:0,78,4133	0/0:22,0:22:66.21:0,66,3326	0/0:23,0:23:69.24:0,69,4022	1/1:1,16:17:42.14:1521,42,0	0/0:28,0:28:81.28:0,81,4463	0/0:25,0:25:75.24:0,75,4124	0/0:26,0:26:78.27:0,78,4458	0/0:22,0:22:66.23:0,66,3686	0/0:18,0:17:51.16:0,51,2486	0/0:22,0:22:63.22:0,63,3384	0/0:22,0:22:66.23:0,66,3791	0/0:10,0:10:30.10:0,30,1749	0/0:24,0:24:72.25:0,72,3977	0/0:29,0:29:84.24:0,84,4412	0/0:23,0:22:69.24:0,69,4017	0/0:25,0:25:69.24:0,69,3880	0/0:25,0:25:75.26:0,75,4107	0/0:27,0:27:81.28:0,81,4370	0/0:2,0:2:6.02:0,6,350
chr10	80153275	.	AT	A	612.82	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=6.241;DP=594;FS=6.603;HRun=7;HaplotypeScore=59.1670;InbreedingCoeff=0.6424;MQ=71.04;MQ0=0;MQRankSum=-0.973;QD=18.02;ReadPosRankSum=-0.234;VQSLOD=3.0909;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.21:0,75,917	0/0:9,0:9:27.09:0,27,338	0/0:8,0:8:21.06:0,21,242	0/1:9,0:9:13.15:13,0,115	0/0:27,0:27:75.23:0,75,931	0/0:23,0:23:69.21:0,69,857	0/0:21,0:21:51.16:0,51,641	0/0:32,0:32:75.22:0,75,923	0/0:22,0:22:66.19:0,66,805	0/0:29,0:29:84.27:0,84,1053	0/0:23,0:23:63.20:0,63,793	0/0:18,0:18:36.12:0,36,453	0/0:27,0:27:69.19:0,69,849	0/0:22,0:22:63.20:0,63,793	0/0:21,0:21:54.17:0,54,679	0/0:18,0:18:51.15:0,51,626	0/0:16,0:16:45.11:0,45,527	0/0:18,0:17:54.11:0,54,639	0/0:24,0:24:66.20:0,66,819	0/0:32,0:32:90.25:0,90,1113	0/0:21,0:21:60.18:0,60,743	0/0:22,0:22:60.19:0,60,755	0/0:22,0:22:63.19:0,63,780	0/0:22,0:22:63.20:0,63,792	1/1:1,24:25:69.16:704,69,0	0/0:24,0:24:60.19:0,60,755	0/0:27,0:26:78.22:0,78,964	0/0:4,0:4:12.04:0,12,151
chr10	80153599	.	T	TA	11382.52	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-4.625;DP=620;FS=11.806;HRun=1;HaplotypeScore=76.2940;InbreedingCoeff=0.9654;MQ=66.74;MQ0=0;MQRankSum=0.864;QD=27.49;ReadPosRankSum=0.500;VQSLOD=3.4430;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:48.11:507,48,0	1/1:1,7:8:21.07:311,21,0	0/0:14,0:12:14.68:0,15,175	0/0:11,0:10:20.48:0,20,195	1/1:9,11:20:42.06:596,42,0	1/1:3,29:31:79:1130,79,0	0/0:18,0:18:51.56:0,52,594	1/1:7,23:30:80.85:846,81,0	1/1:1,19:20:42.14:608,42,0	1/1:5,24:29:77.96:932,78,0	1/1:6,23:29:67.57:737,68,0	0/0:22,0:22:50.96:0,51,551	1/1:20,0:20:11.85:117,12,0	0/0:29,0:29:81.12:0,81,881	1/1:4,20:24:40.95:581,41,0	0/0:24,0:25:64.34:0,64,773	0/0:27,0:27:71.23:0,71,671	1/1:7,6:13:27.67:308,28,0	1/1:5,6:11:30.05:370,30,0	1/1:3,30:33:89.32:1051,89,0	1/1:2,24:26:52.99:758,53,0	0/0:30,0:30:82.13:0,82,938	0/0:15,0:15:32.95:0,33,367	0/0:15,0:15:39.07:0,39,443	1/1:27,0:27:51.12:540,51,0	1/1:28,2:30:79.98:823,80,0	1/1:6,29:35:81.11:1138,81,0	1/1:2,0:2:3.01:32,3,0
chr10	80153600	.	A	AATT	7687.18	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=3.905;DP=637;FS=13.903;HRun=0;HaplotypeScore=115.7409;InbreedingCoeff=0.9102;MQ=67.08;MQ0=0;MQRankSum=-0.536;QD=18.13;ReadPosRankSum=1.165;VQSLOD=3.4464;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:28:48.16:1009,48,0	1/1:8,0:8:20.59:126,21,0	0/0:15,0:13:20.09:0,20,257	0/0:10,0:10:20.63:0,21,235	1/1:21,0:21:7.53:258,8,0	1/1:31,0:31:60.60:434,61,0	0/0:19,0:19:51.54:0,52,793	1/1:24,0:25:49.53:442,50,0	1/1:19,0:20:41.26:274,41,0	1/1:30,0:30:53.94:488,54,0	1/1:27,0:28:28.65:354,29,0	0/0:21,0:23:50.67:0,51,715	1/1:2,20:27:11.90:244,12,0	0/0:29,0:30:81.09:0,81,1129	1/1:22,0:22:14.17:203,14,0	0/0:22,0:26:72.11:0,72,1120	0/0:24,0:27:64.80:0,65,807	0/1:14,0:14:1.24:143,0,1	1/1:11,0:11:29.62:211,30,0	1/1:31,0:31:59.74:468,60,0	1/1:27,0:27:45.57:297,46,0	0/0:23,0:30:90.14:0,90,1313	0/0:13,0:16:31.69:0,32,486	0/0:14,0:15:39:0,39,594	1/1:0,24:32:51.16:1115,51,0	1/1:4,1:31:86.63:1038,87,0	1/1:33,1:35:61.01:544,61,0	1/1:0,0:2:3.01:40,3,0
chr10	80154383	.	GA	G	1769.51	PASS	AB=0.856;AC=13;AF=0.232;AN=56;BaseQRankSum=9.394;DP=475;FS=4.789;HRun=9;HaplotypeScore=48.0603;InbreedingCoeff=0.7070;MQ=83.53;MQ0=0;MQRankSum=-1.714;QD=13.51;ReadPosRankSum=2.711;VQSLOD=3.2243;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:54.02:494,54,0	0/1:3,1:4:15.44:15,0,84	0/0:19,0:18:12.82:0,13,353	0/0:17,0:17:45.59:0,46,502	0/0:16,0:16:42.11:0,42,476	1/1:2,18:20:42.02:384,42,0	0/0:10,0:10:30.05:0,30,331	0/0:26,0:26:54.16:0,54,623	0/0:11,0:11:30.09:0,30,346	0/0:22,0:22:54.16:0,54,621	0/0:15,0:15:39.12:0,39,450	0/0:19,0:19:51.15:0,51,589	1/1:1,14:15:36.02:329,36,0	0/0:16,0:16:42.12:0,42,485	0/0:27,0:27:75.21:0,75,856	0/0:11,0:11:24.07:0,24,277	0/0:17,0:16:51.15:0,51,588	0/1:16,3:18:34.27:34,0,402	0/0:18,1:19:20.66:0,21,471	0/0:17,0:17:51.15:0,51,589	0/0:9,0:9:24.07:0,24,277	0/0:14,0:14:30.09:0,30,346	0/0:15,0:15:39.12:0,39,450	0/0:13,0:13:33.10:0,33,381	0/1:17,2:19:6.79:7,0,436	1/1:2,20:23:62.05:550,62,0	0/0:31,0:31:93.23:0,93,1058	1/1:2,6:8:15:137,15,0
chr10	80154518	.	TTTTTC	T	7425.95	PASS	AB=1.000;AC=35;AF=0.648;AN=54;BaseQRankSum=8.843;DP=356;FS=2.750;HRun=0;HaplotypeScore=75.6255;InbreedingCoeff=0.8666;MQ=74.14;MQ0=8;MQRankSum=-2.393;QD=29.82;ReadPosRankSum=1.857;VQSLOD=4.6676;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,12:17:27.09:510,27,0	1/1:0,8:8:21.07:397,21,0	0/0:26,0:10:4.32:0,4,94	0/1:33,0:15:1.44:1,0,78	1/1:5,9:14:24.01:382,24,0	1/1:4,9:13:21.07:395,21,0	./.	1/1:7,9:16:9.87:295,10,0	1/1:2,4:6:9.03:170,9,0	1/1:3,14:17:42.13:727,42,0	1/1:1,12:13:24.08:431,24,0	0/0:9,0:9:21.07:0,21,582	1/1:1,3:4:9.03:170,9,0	0/0:9,0:9:18.05:0,18,395	1/1:3,8:11:21.07:395,21,0	0/0:5,0:5:12.03:0,12,263	0/0:22,0:22:54.14:0,54,1340	1/1:3,12:15:27.09:510,27,0	1/1:8,9:17:27.05:454,27,0	1/1:3,10:13:27.06:454,27,0	1/1:0,2:2:6.02:113,6,0	0/0:6,0:6:15.05:0,15,410	0/0:10,0:10:30.10:0,30,860	0/0:4,0:4:9.03:0,9,238	0/0:16,0:16:45.15:0,45,1287	1/1:2,13:15:42.13:719,42,0	1/1:6,21:27:54.19:1019,54,0	1/1:3,5:8:15.05:283,15,0
chr10	80154635	.	CCCCCT	C	948.27	PASS	AB=0.917;AC=18;AF=0.563;AN=32;BaseQRankSum=2.947;DP=141;FS=3.424;HRun=0;HaplotypeScore=15.7689;InbreedingCoeff=0.4232;MQ=25.88;MQ0=70;MQRankSum=-4.140;QD=18.24;ReadPosRankSum=-0.813;VQSLOD=2.2470;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,1:1:3.01:62,3,0	./.	./.	1/1:5,2:5:3:25,3,0	./.	./.	1/1:2,6:8:15.05:310,15,0	./.	1/1:3,4:4:12.04:248,12,0	./.	0/1:3,0:2:0:0,0,0	./.	0/0:5,0:1:3.01:0,3,75	./.	0/0:8,0:2:3.01:0,3,38	0/0:14,0:4:12.02:0,12,253	1/1:5,2:3:6.02:124,6,0	1/1:4,1:1:3.01:62,3,0	1/1:2,2:2:3.01:62,3,0	./.	0/0:4,0:2:3.01:0,3,90	0/0:1,0:1:3.01:0,3,36	./.	0/0:11,0:11:18.05:0,18,502	0/1:4,1:2:56.08:56,0,84	./.	1/1:3,2:2:6.02:118,6,0
chr10	80157248	.	T	TC	2075.61	PASS	AC=16;AF=0.471;AN=34;BaseQRankSum=1.937;DP=572;FS=105.780;HRun=1;HaplotypeScore=36.1256;InbreedingCoeff=0.8474;MQ=24.54;MQ0=166;MQRankSum=-8.236;QD=19.96;ReadPosRankSum=3.203;VQSLOD=-0.2169;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,5:4:9.03:134,9,0	./.	./.	1/1:8,15:16:33.03:464,33,0	./.	./.	./.	./.	1/1:9,4:4:12.04:179,12,0	1/1:5,8:10:26.92:347,27,0	0/0:38,0:26:54.13:0,54,673	./.	0/0:34,0:21:18:0,18,213	./.	0/0:33,0:26:18.06:0,18,228	0/0:45,0:26:24.01:0,24,283	./.	0/0:16,2:2:3.01:0,3,39	1/1:4,13:15:36.12:523,36,0	./.	0/0:29,0:22:18.06:0,18,233	0/0:42,0:33:56.99:0,57,660	0/0:46,0:33:21.07:0,21,270	1/1:2,6:6:12.04:179,12,0	0/0:8,2:2:3.01:0,3,39	1/1:10,1:1:3.01:45,3,0	1/1:6,8:8:24.08:358,24,0
chr10	80157443	.	CT	C	2664.85	PASS	AB=0.938;AC=23;AF=0.460;AN=50;BaseQRankSum=3.301;DP=472;FS=17.086;HRun=4;HaplotypeScore=33.8165;InbreedingCoeff=0.8561;MQ=21.48;MQ0=141;MQRankSum=-0.581;QD=13.26;ReadPosRankSum=3.741;VQSLOD=1.0061;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:8:15.05:0,15,209	1/1:1,10:8:20.93:215,21,0	./.	./.	1/1:4,21:11:27.08:323,27,0	0/0:17,0:13:33.11:0,33,450	0/0:13,0:7:21.07:0,21,293	1/1:2,8:9:24.07:288,24,0	1/1:4,9:9:21.06:251,21,0	1/1:8,9:7:21.06:251,21,0	1/1:5,17:13:27.08:323,27,0	0/0:18,0:12:30.07:0,30,394	0/0:13,0:5:12.04:0,12,166	0/0:24,0:12:27.09:0,27,377	1/1:9,12:14:33.10:395,33,0	0/0:17,0:13:27.02:0,27,353	0/0:29,0:14:30.10:0,30,419	0/1:14,1:2:13.87:14,0,36	1/1:6,3:5:9.03:108,9,0	1/1:16,9:9:15.05:179,15,0	1/1:9,2:1:3.01:36,3,0	0/0:24,0:19:45.11:0,45,606	0/0:29,0:21:24.08:0,24,330	0/0:12,0:3:6.02:0,6,84	0/0:25,0:13:21.07:0,21,289	0/0:22,0:11:27.06:0,27,356	1/1:8,14:17:42.06:485,42,0	./.
chr10	80160003	.	GA	G	7781.05	PASS	AB=0.871;AC=36;AF=0.643;AN=56;BaseQRankSum=9.964;DP=579;FS=10.124;HRun=10;HaplotypeScore=61.7031;InbreedingCoeff=0.8501;MQ=72.01;MQ0=0;MQRankSum=-0.578;QD=18.98;ReadPosRankSum=0.191;VQSLOD=5.2634;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:27:44.81:132,45,0	1/1:1,4:5:8.99:78,9,0	0/1:7,2:9:40.08:40,0,54	0/1:11,1:11:5:5,0,172	1/1:2,39:41:83.79:955,84,0	1/1:0,24:24:68.99:599,69,0	0/0:20,0:20:51.13:0,51,560	1/1:5,26:31:77.94:670,78,0	1/1:2,21:24:42.33:454,42,0	1/1:4,29:33:86.94:747,87,0	1/1:3,30:33:83.97:729,84,0	0/0:10,0:10:30.08:0,30,332	0/0:0,0:12:25.93:0,26,136	0/0:19,0:19:51.14:0,51,562	1/1:1,23:24:62.99:547,63,0	0/0:15,1:16:16.06:0,16,405	0/0:18,0:18:48.12:0,48,522	1/1:1,11:12:26.99:234,27,0	1/1:5,11:16:32.97:284,33,0	1/1:4,30:34:89.96:781,90,0	1/1:1,10:11:26.99:234,27,0	0/0:18,0:18:45.12:0,45,492	0/0:33,0:33:84.23:0,84,927	0/0:23,0:23:63.16:0,63,687	1/1:3,0:20:30.55:90,31,0	1/1:3,18:21:53.97:466,54,0	1/1:2,26:28:71.98:625,72,0	1/1:0,4:5:14.03:110,14,0
chr10	80160254	.	A	AT	536.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.733;DP=450;FS=3.180;HRun=9;HaplotypeScore=47.0847;InbreedingCoeff=0.7144;MQ=63.88;MQ0=0;MQRankSum=0.737;QD=24.37;ReadPosRankSum=1.358;VQSLOD=4.4551;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:38.97:0,39,335	0/0:11,0:11:29.99:0,30,260	0/0:3,0:3:6:0,6,52	0/0:3,0:3:2.99:0,3,24	0/0:23,0:24:59.02:0,59,501	0/0:19,0:19:44.98:0,45,391	0/0:11,0:11:23.99:0,24,208	0/0:32,0:32:86.96:0,87,751	0/0:17,0:17:50.97:0,51,439	0/0:27,0:27:74.98:0,75,651	0/0:19,0:19:44.87:0,45,390	0/0:13,0:13:26.99:0,27,234	0/0:19,0:19:50.97:0,51,439	0/0:17,0:17:44.98:0,45,391	0/0:10,0:10:29.99:0,30,260	0/0:13,0:13:32.99:0,33,286	0/0:13,0:13:32.97:0,33,282	0/0:10,0:10:29.99:0,30,260	0/0:19,0:20:47.02:0,47,397	0/0:19,0:19:41.97:0,42,365	0/0:19,0:19:47.99:0,48,417	0/0:17,0:17:41.98:0,42,365	0/0:19,0:19:53.99:0,54,469	0/0:3,0:3:6:0,6,52	1/1:0,22:22:57.15:631,57,0	0/0:24,0:24:56.95:0,57,490	0/0:23,0:23:59.98:0,60,520	0/0:9,0:9:26.99:0,27,234
chr10	80160319	.	CA	C	7823.12	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=11.985;DP=518;FS=0.000;HRun=9;HaplotypeScore=50.4363;InbreedingCoeff=0.9671;MQ=68.85;MQ0=0;MQRankSum=-1.856;QD=24.45;ReadPosRankSum=1.795;VQSLOD=5.4436;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.14:0,48,554	1/1:0,5:5:15.01:137,15,0	0/0:9,0:9:17.88:0,18,162	0/0:3,0:3:2.99:0,3,24	1/1:4,32:36:93.03:847,93,0	1/1:0,25:25:69.04:632,69,0	0/0:12,1:13:11.65:0,12,388	1/1:3,10:14:32.05:281,32,0	1/1:1,16:17:45.02:412,45,0	1/1:3,23:26:69.03:631,69,0	1/1:1,23:24:66.03:604,66,0	0/0:15,0:15:45.13:0,45,519	0/0:21,0:21:60.18:0,60,692	0/0:18,1:19:29.70:0,30,596	1/1:0,16:16:45.02:412,45,0	0/0:14,0:14:39.11:0,39,442	1/1:0,11:11:30.02:275,30,0	1/1:2,12:14:36.02:330,36,0	1/1:3,15:18:32.84:408,33,0	1/1:4,27:31:78.03:714,78,0	1/1:0,17:17:48.03:439,48,0	0/0:17,0:17:45.13:0,45,519	0/0:30,0:30:75.17:0,75,855	0/0:12,0:12:36.05:0,36,391	0/0:28,0:28:78.23:0,78,900	1/1:2,24:26:69.03:632,69,0	1/1:0,31:31:90.05:824,90,0	1/1:0,9:9:27.01:247,27,0
chr10	80160830	.	C	CACGT	451.85	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.277;DP=531;FS=1.472;HRun=0;HaplotypeScore=117.1275;InbreedingCoeff=0.9159;MQ=75.04;MQ0=5;MQRankSum=-3.292;QD=21.52;ReadPosRankSum=0.641;VQSLOD=3.4516;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:73.04:0,73,820	0/0:7,0:7:20.66:0,21,321	0/0:26,0:18:52:0,52,909	0/0:36,0:24:66.22:0,66,1241	0/0:29,0:29:81.06:0,81,1110	0/0:11,0:11:27.02:0,27,343	0/0:17,0:17:51.11:0,51,1022	0/0:22,0:22:52.84:0,53,706	0/0:15,0:15:39.59:0,40,575	0/0:24,0:24:67.16:0,67,985	0/0:14,0:14:35.55:0,36,492	0/0:17,0:17:42.09:0,42,838	1/1:4,5:11:15.05:404,15,0	1/1:3,7:10:6.02:155,6,0	0/0:15,0:15:36.59:0,37,615	0/0:20,0:20:54.19:0,54,1124	0/0:27,0:27:69.56:0,70,1087	0/0:17,0:17:48.11:0,48,716	0/0:17,0:17:39.30:0,39,506	0/0:24,0:24:57.15:0,57,853	0/0:16,0:16:36.74:0,37,497	0/0:25,0:24:66.17:0,66,1289	0/0:17,0:17:48.16:0,48,968	0/0:22,0:22:57.12:0,57,1039	0/0:19,0:19:42.14:0,42,679	0/0:20,0:20:57.20:0,57,1135	0/0:18,0:18:48.16:0,48,742	0/0:7,0:6:12.04:0,12,251
chr10	80161237	.	C	CAAAAA	14099.86	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=0.545;DP=599;FS=3.250;HRun=9;HaplotypeScore=117.3521;InbreedingCoeff=0.9927;MQ=81.04;MQ0=0;MQRankSum=-9.299;QD=35.97;ReadPosRankSum=-6.062;VQSLOD=1.7188;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:30:39.13:836,39,0	1/1:4,5:9:15.05:380,15,0	0/0:22,0:22:35.98:0,36,593	0/0:20,0:19:41.97:0,42,606	1/1:11,17:31:63.17:1399,63,0	1/1:8,0:27:36.08:553,36,0	0/0:16,0:16:39.07:0,39,646	1/1:21,11:34:60.17:1382,60,0	0/0:21,0:22:48.05:0,48,775	1/1:10,11:28:61.99:1289,62,0	1/1:7,10:19:42.10:868,42,0	0/0:26,0:26:72.19:0,72,1163	1/1:9,0:26:30.10:508,30,0	1/1:7,0:23:27.56:467,28,0	1/1:8,4:14:15.05:290,15,0	0/0:10,0:10:27.08:0,27,444	1/1:3,11:16:18.06:488,18,0	1/1:9,11:20:21.07:544,21,0	1/1:13,2:21:33.09:673,33,0	1/1:4,18:22:54.19:1368,54,0	1/1:6,8:16:22.63:547,23,0	0/0:24,0:24:63.15:0,63,1016	0/0:27,0:27:66.21:0,66,1080	0/0:9,0:9:27.09:0,27,447	1/1:11,12:23:51.17:1215,51,0	0/0:20,0:20:57.18:0,57,944	1/1:15,17:32:54.18:1292,54,0	0/0:11,0:11:33.11:0,33,547
chr10	80161593	.	AT	A	8122.06	PASS	AB=0.813;AC=31;AF=0.554;AN=56;BaseQRankSum=9.901;DP=477;FS=13.230;HRun=5;HaplotypeScore=47.6936;InbreedingCoeff=0.9249;MQ=81.63;MQ0=0;MQRankSum=-1.889;QD=27.44;ReadPosRankSum=2.767;VQSLOD=3.5790;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:33.09:374,33,0	1/1:0,5:5:15.04:170,15,0	0/0:25,0:24:68.99:0,69,819	0/0:16,0:14:32.79:0,33,368	1/1:2,22:24:57.16:645,57,0	1/1:2,13:15:33.09:374,33,0	0/0:11,0:11:30.10:0,30,410	1/1:0,23:23:69.15:753,69,0	0/0:13,0:13:39.13:0,39,533	1/1:2,13:15:36.09:399,36,0	1/1:0,17:17:45.13:510,45,0	0/0:16,0:16:42.12:0,42,543	0/0:18,0:18:54.09:0,54,695	0/0:15,0:15:42.13:0,42,557	1/1:1,18:19:48.14:544,48,0	0/0:18,0:18:54.17:0,54,724	1/1:0,29:29:81.23:918,81,0	1/1:3,15:18:51.10:563,51,0	1/1:0,17:17:51.12:563,51,0	1/1:2,20:22:60.17:680,60,0	1/1:0,17:17:36.10:408,36,0	0/0:11,0:11:27.09:0,27,369	0/0:9,0:9:27.09:0,27,369	0/0:20,0:20:60.15:0,60,757	1/1:2,18:20:42.12:476,42,0	0/1:10,3:13:65.98:66,0,319	1/1:3,24:27:60.02:679,60,0	0/0:9,0:9:27.05:0,27,321
chr10	80161831	.	AAAT	A	813.05	PASS	AB=0.917;AC=3;AF=0.054;AN=56;BaseQRankSum=6.745;DP=367;FS=5.760;HRun=0;HaplotypeScore=71.5153;InbreedingCoeff=0.4667;MQ=70.47;MQ0=0;MQRankSum=0.922;QD=24.64;ReadPosRankSum=2.693;VQSLOD=3.2904;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:57.19:899,57,0	0/0:8,0:8:24.07:0,24,466	0/1:10,1:9:18.89:19,0,83	0/0:8,0:5:2:0,2,59	0/0:28,0:28:84.27:0,84,1780	0/0:20,0:20:51.16:0,51,1069	0/0:6,0:6:18.06:0,18,394	0/0:23,0:22:66.21:0,66,1363	0/0:8,0:8:21.07:0,21,459	0/0:14,0:14:42.13:0,42,814	0/0:17,0:17:51.15:0,51,1037	0/0:11,0:11:33.11:0,33,689	0/0:11,0:11:33.09:0,33,625	0/0:12,0:12:30.09:0,30,594	0/0:11,0:11:33.09:0,33,641	0/0:11,0:11:33.11:0,33,707	0/0:20,0:20:60.21:0,60,1307	0/0:9,0:9:26.99:0,27,499	0/0:10,0:10:30.09:0,30,603	0/0:20,0:20:51.17:0,51,1091	0/0:13,0:13:39.12:0,39,802	0/0:1,0:1:3:0,3,25	0/0:5,0:5:9:0,9,116	0/0:3,0:3:9.01:0,9,155	0/0:27,0:27:78.26:0,78,1652	0/0:13,0:13:39.13:0,39,855	0/0:17,0:17:48.16:0,48,1047	0/0:8,0:8:24.08:0,24,507
chr10	80162933	.	CT	C	520.33	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=0.902;DP=332;FS=2.624;HRun=1;HaplotypeScore=41.7832;InbreedingCoeff=0.4584;MQ=70.30;MQ0=1;MQRankSum=-1.012;QD=14.06;ReadPosRankSum=-2.961;VQSLOD=1.7633;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:35.19:0,35,213	0/0:2,0:2:1.90:0,2,23	0/0:14,0:13:28.72:0,29,322	0/0:11,0:10:26.83:0,27,258	0/0:6,0:6:5.66:0,6,57	0/0:13,0:13:20.58:0,21,133	0/0:34,0:34:76.64:0,77,1159	0/0:11,0:10:21.03:0,21,204	0/0:18,0:18:53.86:0,54,640	0/0:11,0:11:27.01:0,27,238	0/0:3,2:5:2.99:0,3,25	0/0:17,0:17:43.78:0,44,489	1/1:10,4:14:41.26:323,41,0	1/1:9,5:14:34.65:269,35,0	0/0:6,0:6:8.71:0,9,53	0/0:10,0:10:30.06:0,30,350	0/0:14,0:14:11.77:0,12,105	0/0:15,0:15:14.38:0,14,74	0/0:6,0:6:17.49:0,17,147	0/0:5,0:5:8.94:0,9,73	0/0:10,0:10:5.35:0,5,74	0/0:11,0:11:33.05:0,33,377	0/0:14,0:14:39.07:0,39,459	0/0:17,0:17:48.16:0,48,637	0/1:4,0:4:18.23:18,0,38	0/0:13,0:13:36.05:0,36,406	0/1:5,0:5:43.44:44,0,43	0/0:6,0:6:18:0,18,201
chr10	80163089	.	CTGGT	C	9185.35	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=14.443;DP=500;FS=10.686;HRun=0;HaplotypeScore=81.6321;InbreedingCoeff=0.9882;MQ=53.78;MQ0=9;MQRankSum=-1.293;QD=40.11;ReadPosRankSum=2.393;VQSLOD=4.7567;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,16:21:42.14:755,42,0	1/1:0,4:4:12.04:216,12,0	0/0:21,0:9:18.06:0,18,407	0/0:25,0:15:30.03:0,30,664	1/1:2,14:16:39.13:697,39,0	1/1:3,16:18:39.13:701,39,0	0/0:24,0:24:69.24:0,69,1785	1/1:4,14:15:24.06:398,24,0	0/0:23,0:23:63.22:0,63,1606	1/1:1,18:19:48.16:863,48,0	1/1:4,6:10:21.07:368,21,0	0/0:14,0:14:39.13:0,39,998	0/0:26,0:26:69.24:0,69,1790	0/0:21,0:21:60.21:0,60,1557	1/1:2,23:25:72.23:1265,72,0	0/0:18,0:18:51.14:0,51,1217	1/1:2,17:17:45.14:779,45,0	1/1:3,11:13:27.09:485,27,0	1/1:2,4:5:12.03:189,12,0	1/1:3,12:15:39.12:667,39,0	1/1:1,19:20:51.17:907,51,0	0/0:21,0:21:60.21:0,60,1559	0/0:15,0:15:45.15:0,45,1106	0/0:20,0:20:57.20:0,57,1481	1/1:3,6:9:18.06:313,18,0	0/0:31,0:30:81.28:0,81,2045	1/1:3,10:13:33.11:584,33,0	0/0:12,0:12:36.12:0,36,904
chr10	80163166	.	T	TGG	7235.89	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-3.018;DP=546;FS=18.640;HRun=7;HaplotypeScore=73.4375;InbreedingCoeff=0.9885;MQ=56.30;MQ0=11;MQRankSum=-2.268;QD=24.78;ReadPosRankSum=-1.089;VQSLOD=2.3690;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:24:18.01:199,18,0	1/1:2,10:10:21.07:344,21,0	0/0:23,0:12:12.41:0,12,161	0/0:24,0:15:29.24:0,29,295	1/1:5,9:14:23.56:334,24,0	1/1:9,0:16:27.04:277,27,0	0/0:23,0:23:60.17:0,60,699	1/1:9,7:10:18.04:247,18,0	0/0:32,0:33:90.25:0,90,1048	1/1:11,9:14:18.03:268,18,0	1/1:6,8:10:20.56:301,21,0	0/0:17,0:17:51.15:0,51,594	0/0:17,0:17:48.14:0,48,559	0/0:18,0:18:48.14:0,48,556	1/1:10,19:28:63.20:1007,63,0	0/0:15,0:15:45.13:0,45,524	1/1:5,21:24:57.18:910,57,0	1/1:0,16:15:41.63:648,42,0	1/1:9,9:11:23.57:344,24,0	1/1:1,0:20:44.52:156,45,0	1/1:2,16:16:42.14:689,42,0	0/0:19,0:19:54.16:0,54,629	0/0:18,0:18:51.15:0,51,594	0/0:19,0:19:51.15:0,51,594	1/1:3,17:21:53.67:844,54,0	0/0:21,1:21:57.16:0,57,664	1/1:1,15:16:44.60:668,45,0	0/0:6,0:6:15.04:0,15,175
chr10	80164101	.	TGAG	T	2394	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.249;DP=721;FS=6.642;HRun=0;HaplotypeScore=109.5226;InbreedingCoeff=0.9986;MQ=61.57;MQ0=8;MQRankSum=-0.402;QD=47.88;ReadPosRankSum=2.875;VQSLOD=5.7593;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.25:0,78,1866	0/0:13,0:13:39.13:0,39,960	0/0:21,0:14:39.07:0,39,740	0/0:18,0:13:26.70:0,27,508	0/0:31,0:31:93.32:0,93,2292	0/0:26,0:26:78.27:0,78,1921	0/0:22,0:21:51.18:0,51,1253	0/0:27,0:26:72.24:0,72,1727	0/0:15,0:15:45.15:0,45,1058	0/0:32,0:32:96.32:0,96,2279	0/0:31,0:31:93.32:0,93,2280	0/0:21,0:21:63.22:0,63,1495	1/1:0,23:23:66.23:1230,66,0	1/1:0,27:27:69.24:1286,69,0	0/0:24,0:24:72.25:0,72,1769	0/0:24,0:24:72.25:0,72,1770	0/0:40,0:40:99:0,111,2730	0/0:22,0:22:66.23:0,66,1583	0/0:36,0:29:84.28:0,84,2019	0/0:38,0:38:99:0,114,2784	0/0:35,0:35:99:0,105,2435	0/0:31,0:31:93.32:0,93,2292	0/0:29,0:29:83.97:0,84,2069	0/0:9,0:9:27.07:0,27,586	0/0:22,0:22:66.23:0,66,1577	0/0:29,0:27:81.28:0,81,1997	0/0:37,0:36:99:0,111,2730	0/0:10,0:10:30.07:0,30,638
chr10	80164805	.	TACACACACAC	T	11074.21	PASS	AB=0.673;AC=30;AF=0.536;AN=56;BaseQRankSum=11.537;DP=556;FS=6.256;HRun=0;HaplotypeScore=169.2447;InbreedingCoeff=0.7070;MQ=60.59;MQ0=3;MQRankSum=-11.559;QD=33.16;ReadPosRankSum=3.182;VQSLOD=4.1500;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,13:24:23.38:555,23,0	1/1:2,4:7:9.03:252,9,0	0/0:28,0:17:12.04:0,12,482	0/0:20,0:16:18.06:0,18,412	1/1:7,21:28:45.07:1159,45,0	1/1:9,9:20:35.15:965,35,0	0/0:21,0:21:48.16:0,48,2176	0/1:18,12:30:90.22:392,0,90	0/0:22,0:22:39.11:0,39,1794	1/1:5,12:19:29.84:897,30,0	1/1:10,16:26:21.07:636,21,0	0/0:13,0:13:36.12:0,36,1653	1/1:9,9:19:21.07:617,21,0	1/1:6,7:13:18.06:547,18,0	1/1:4,14:18:33.11:887,33,0	0/0:14,0:18:42.13:0,42,1650	1/1:9,3:12:14.91:289,15,0	0/1:6,4:10:10.97:173,0,11	0/1:9,7:17:5.54:497,0,6	1/1:4,15:20:33.11:980,33,0	0/1:4,9:14:67.78:68,0,70	0/0:18,0:21:42.13:0,42,1833	0/0:20,0:20:39.12:0,39,1670	0/0:29,0:31:69.22:0,69,2736	1/1:10,14:28:42.14:1159,42,0	0/0:17,0:20:48.16:0,48,1837	1/1:8,20:27:33.11:1002,33,0	0/0:7,0:6:9.03:0,9,413
chr10	80167442	.	T	TGG	15719.49	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=14.380;DP=448;FS=0.000;HRun=0;HaplotypeScore=91.7466;InbreedingCoeff=0.9640;MQ=81.66;MQ0=0;MQRankSum=-7.228;QD=53.83;ReadPosRankSum=3.120;VQSLOD=5.5581;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:42.14:827,42,0	1/1:0,6:6:18.06:366,18,0	0/0:14,0:14:27.27:0,27,455	0/0:13,0:13:33.10:0,33,449	1/1:1,21:22:60.20:1194,60,0	1/1:1,21:22:60.21:1216,60,0	0/0:11,0:11:33.10:0,33,512	1/1:1,32:34:99:1960,99,0	0/0:13,0:13:39.13:0,39,636	1/1:1,20:22:63.20:1240,63,0	1/1:0,22:24:51.17:1035,51,0	0/0:16,0:16:45.15:0,45,734	1/1:1,19:20:54.19:1096,54,0	1/1:2,10:12:27.09:548,27,0	1/1:0,9:9:27.09:548,27,0	0/0:16,0:16:45.14:0,45,710	1/1:0,10:10:23.76:487,24,0	1/1:0,11:11:33.11:670,33,0	1/1:0,12:12:36.12:730,36,0	1/1:0,24:24:69.24:1375,69,0	1/1:4,10:14:30.10:602,30,0	0/0:15,0:15:42.13:0,42,641	0/0:26,0:26:72.25:0,72,1175	0/0:7,0:7:18.02:0,18,262	1/1:0,13:13:36.12:731,36,0	0/0:20,1:21:2.22:0,2,894	1/1:0,20:20:54.19:1096,54,0	0/0:4,0:4:12.04:0,12,196
chr10	80168000	.	AGTGTGTGTGTGTGTGTGTGT	A	7961.67	PASS	AB=0.894;AC=24;AF=0.429;AN=56;BaseQRankSum=9.936;DP=476;FS=20.560;HRun=0;HaplotypeScore=257.3887;InbreedingCoeff=0.6301;MQ=57.92;MQ0=3;MQRankSum=-7.788;QD=34.77;ReadPosRankSum=0.872;VQSLOD=2.5412;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:24.05:0,24,650	1/1:4,2:5:3.01:160,3,0	0/0:17,0:12:6.02:0,6,230	0/0:19,0:13:6.02:0,6,111	1/1:10,9:17:21.07:924,21,0	1/1:8,1:9:3.01:160,3,0	0/0:18,0:18:39.12:0,39,1933	0/1:18,0:18:0.95:47,0,1	0/0:13,0:21:12.51:0,13,848	1/1:18,7:22:15.01:530,15,0	1/1:11,7:16:15.05:718,15,0	0/0:13,0:16:24.08:0,24,1571	0/0:10,0:15:13.86:0,14,913	0/0:19,0:19:30.09:0,30,1924	1/1:10,9:19:24.08:1256,24,0	0/0:14,0:14:16.76:0,17,2059	0/1:12,3:15:28.76:402,0,29	0/1:9,3:12:58.85:466,0,59	0/1:15,0:16:5.11:94,0,5	1/1:12,14:25:30.10:1477,30,0	1/1:13,0:13:3:25,3,0	0/0:8,0:10:18.06:0,18,1248	0/0:18,0:18:18.06:0,18,1373	0/0:18,0:22:42.14:0,42,2764	1/1:6,4:9:9.03:459,9,0	0/0:13,0:17:27.09:0,27,1569	1/1:8,9:17:24.08:1244,24,0	0/0:7,0:13:18.06:0,18,1103
chr10	80168184	.	CT	C	5319.40	PASS	AB=0.944;AC=36;AF=0.643;AN=56;BaseQRankSum=13.282;DP=483;FS=7.494;HRun=11;HaplotypeScore=95.9620;InbreedingCoeff=0.8191;MQ=71.38;MQ0=0;MQRankSum=-2.489;QD=15.11;ReadPosRankSum=2.743;VQSLOD=5.0699;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,20:31:46.90:375,47,0	1/1:1,2:3:3:25,3,0	0/0:12,0:12:9.25:0,9,146	0/1:9,0:9:10.45:10,0,66	1/1:6,12:19:31.98:252,32,0	1/1:4,16:20:15.94:337,16,0	0/0:9,0:9:24.02:0,24,244	1/1:7,19:26:56.91:465,57,0	0/0:14,0:14:29.38:0,29,364	1/1:5,15:21:46.95:372,47,0	1/1:4,24:29:64.87:517,65,0	0/0:13,0:13:30.06:0,30,311	1/1:4,0:18:18.33:53,18,0	1/1:1,0:12:22.41:65,22,0	1/1:4,19:23:50.93:419,51,0	0/1:7,1:8:6.60:7,0,142	1/1:3,6:8:17.97:148,18,0	1/1:2,19:21:50.94:419,51,0	1/1:5,10:15:32.88:260,33,0	1/1:6,23:29:62.85:512,63,0	1/1:1,3:4:8.99:74,9,0	0/0:15,0:16:44.98:0,45,460	0/0:17,0:18:38.93:0,39,393	0/0:15,0:15:42.11:0,42,448	1/1:6,23:29:62.92:517,63,0	0/0:19,1:20:29.47:0,29,506	1/1:2,24:25:59.92:493,60,0	0/0:14,0:14:42.10:0,42,441
chr10	80168351	.	TAA	T	7004.33	PASS	AB=0.957;AC=32;AF=0.571;AN=56;BaseQRankSum=9.887;DP=380;FS=2.070;HRun=4;HaplotypeScore=40.1812;InbreedingCoeff=0.8286;MQ=58.35;MQ0=12;MQRankSum=-1.026;QD=26.23;ReadPosRankSum=0.345;VQSLOD=2.7129;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:15:39.13:574,39,0	1/1:0,3:2:6.02:88,6,0	0/1:4,0:2:3.46:3,0,37	0/0:5,0:2:6.01:0,6,67	1/1:0,14:9:24.08:353,24,0	1/1:1,17:18:39.13:575,39,0	0/0:10,0:10:21.07:0,21,393	1/1:3,25:24:66.22:971,66,0	0/0:16,0:16:45.15:0,45,843	1/1:0,17:12:33.11:486,33,0	1/1:0,12:8:24.08:353,24,0	0/0:10,0:10:27.06:0,27,470	0/0:22,0:21:57.20:0,57,1057	0/0:11,0:11:30.10:0,30,553	1/1:0,24:24:57.19:839,57,0	0/0:6,0:6:12.04:0,12,225	1/1:0,12:11:21.07:309,21,0	1/1:0,11:11:15.05:221,15,0	1/1:1,14:12:36.12:528,36,0	1/1:0,18:15:36.12:530,36,0	1/1:0,16:16:24.08:354,24,0	0/0:12,0:12:27.09:0,27,506	0/0:8,0:8:18.06:0,18,332	0/0:6,0:5:12.04:0,12,225	1/1:1,10:9:12.04:176,12,0	0/1:19,2:21:24.19:24,0,1005	1/1:0,23:19:42.14:619,42,0	0/0:7,0:7:18.06:0,18,337
chr10	80168575	.	T	TCCCCCTC	1834.95	PASS	AC=22;AF=0.579;AN=38;BaseQRankSum=-0.846;DP=214;FS=0.000;HRun=0;HaplotypeScore=24.7533;InbreedingCoeff=0.5449;MQ=28.12;MQ0=85;MQRankSum=-3.186;QD=19.73;ReadPosRankSum=0.290;VQSLOD=1.7102;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,2:1:3.01:115,3,0	./.	./.	1/1:6,2:4:3.01:115,3,0	./.	0/0:9,0:4:9.03:0,9,202	1/1:8,6:9:21.04:711,21,0	0/0:11,0:7:18.06:0,18,432	./.	1/1:5,1:4:3.01:115,3,0	0/0:8,0:6:18.05:0,18,385	1/1:4,2:2:3.01:115,3,0	1/1:5,2:3:3.01:114,3,0	./.	0/0:5,0:3:3.01:0,3,72	1/1:6,1:3:3.01:115,3,0	1/1:4,1:4:3.01:115,3,0	./.	1/1:2,3:3:6.02:230,6,0	./.	0/0:11,0:4:6.02:0,6,111	./.	0/0:8,0:3:6.02:0,6,144	1/1:12,6:10:3.01:114,3,0	0/0:8,0:3:6.02:0,6,144	1/1:11,1:3:3.01:115,3,0	0/0:5,0:5:15.05:0,15,360
chr10	80168637	.	C	CCA	77.58	PASS	AB=0.750;AC=9;AF=0.643;AN=14;BaseQRankSum=2.219;DP=213;FS=7.782;HRun=0;HaplotypeScore=9.0340;MQ=8.53;MQ0=164;MQRankSum=0.361;QD=1.44;ReadPosRankSum=-1.307;VQSLOD=-0.5883;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,1:1:2.97:20,3,0	./.	./.	./.	./.	./.	./.	./.	0/0:11,0:2:6.02:0,6,91	./.	./.	./.	./.	1/1:14,0:3:5.68:41,6,0	1/1:9,1:1:3.01:41,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/1:4,2:3:0:0,0,0	0/0:11,0:2:6.02:0,6,91	1/1:4,4:2:3.01:57,3,0	./.
chr10	80171178	.	ATGTGTGTGTGTGTGTG	A	5434.54	PASS	AB=0.885;AC=24;AF=0.480;AN=50;BaseQRankSum=4.024;DP=462;FS=10.155;HRun=0;HaplotypeScore=176.0368;InbreedingCoeff=0.7052;MQ=62.78;MQ0=16;MQRankSum=-3.700;QD=21.23;ReadPosRankSum=0.774;VQSLOD=3.2302;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,1:25:6.11:165,6,0	1/1:3,5:7:2.77:131,3,0	./.	./.	./.	1/1:5,10:15:21.07:919,21,0	0/0:10,0:10:12.04:0,12,544	1/1:22,7:26:17.64:230,18,0	0/0:15,0:14:21:0,21,1229	1/1:10,10:20:15:309,15,0	1/1:8,16:23:9.03:394,9,0	0/0:12,0:12:12.04:0,12,636	0/0:9,0:14:3.48:0,3,89	0/0:7,0:10:12.04:0,12,370	1/1:2,7:9:15.05:657,15,0	0/0:8,0:10:21.07:0,21,1251	0/1:21,9:30:4.15:85,0,4	0/0:12,0:11:18.06:0,18,466	1/1:8,6:13:17.99:293,18,0	1/1:6,9:15:9.03:394,9,0	0/1:30,0:29:32.88:153,0,33	0/0:5,0:5:6.02:0,6,422	0/0:11,0:15:13.30:0,13,553	0/0:11,0:20:11.22:0,11,719	1/1:11,5:15:12.04:525,12,0	0/0:21,0:21:29.78:0,30,1666	1/1:6,14:20:25.52:1180,26,0	0/0:4,0:3:6.02:0,6,270
chr10	80172259	.	TTGGTTGA	T	4976.74	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.878;DP=572;FS=1.021;HRun=0;HaplotypeScore=166.0996;InbreedingCoeff=0.9948;MQ=82.51;MQ0=0;MQRankSum=-10.782;QD=72.13;ReadPosRankSum=0.023;VQSLOD=5.0566;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.19:0,57,2193	0/0:9,0:9:27.09:0,27,1076	0/0:19,0:20:56.78:0,57,1739	0/0:22,0:22:60.10:0,60,1896	0/0:22,0:22:63.22:0,63,2450	0/0:20,0:20:60.21:0,60,2375	0/0:22,0:22:66.23:0,66,2597	0/0:45,0:45:99:0,129,4608	0/0:15,0:15:45.15:0,45,1775	0/0:26,0:26:78.25:0,78,2853	0/0:20,0:19:57.19:0,57,2027	0/0:13,0:13:33.01:0,33,1329	1/1:5,13:18:45.15:1158,45,0	1/1:3,21:24:66.23:1751,66,0	0/0:25,0:25:66.21:0,66,2552	0/0:17,0:17:51.16:0,51,1880	0/0:25,0:25:72.25:0,72,2761	0/0:11,0:11:33.11:0,33,1328	0/0:18,0:18:54.19:0,54,2105	0/0:28,0:27:78.27:0,78,3012	0/0:18,0:18:51.18:0,51,2030	0/0:28,0:28:84.26:0,84,3192	0/0:19,0:19:57.20:0,57,2240	0/0:12,0:12:27.09:0,27,1017	0/0:20,0:20:60.21:0,60,2338	1/1:3,18:22:66.21:1664,66,0	0/0:28,0:28:81.28:0,81,3195	1/1:0,5:5:15.05:404,15,0
chr10	80172336	.	TG	T	10177.07	PASS	AB=1.000;AC=55;AF=0.982;AN=56;BaseQRankSum=0.590;DP=644;FS=1.396;HRun=1;HaplotypeScore=138.8659;InbreedingCoeff=-0.0273;MQ=89.40;MQ0=0;MQRankSum=-3.419;QD=15.80;ReadPosRankSum=4.857;VQSLOD=5.2297;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:54.67:396,55,0	1/1:0,11:11:32.45:206,32,0	1/1:26,0:26:0.87:191,1,0	0/1:32,0:32:19.58:296,0,20	1/1:0,31:31:82.52:526,83,0	1/1:3,19:22:60.43:441,60,0	1/1:0,15:15:43.79:251,44,0	1/1:0,39:39:99:626,113,0	1/1:1,17:18:25.96:256,26,0	1/1:1,32:33:88.94:484,89,0	1/1:0,25:25:69.10:451,69,0	1/1:0,22:22:61.69:373,62,0	1/1:1,17:18:47.31:319,47,0	1/1:0,24:24:63.30:417,63,0	1/1:0,27:27:67.48:406,67,0	1/1:1,25:26:74.72:433,75,0	1/1:1,30:31:83.06:494,83,0	1/1:0,8:8:23.48:144,23,0	1/1:0,19:19:51.93:294,52,0	1/1:2,27:29:76.21:469,76,0	1/1:0,10:10:26.38:157,26,0	1/1:1,21:22:58.76:359,59,0	1/1:2,14:16:22.09:252,22,0	1/1:0,26:26:61.59:366,62,0	1/1:1,23:24:61.47:364,61,0	1/1:1,25:26:70.63:440,71,0	1/1:1,35:36:98.76:661,99,0	1/1:0,5:5:14.87:106,15,0
chr10	80172373	.	TA	T	1444.02	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.585;DP=660;FS=5.838;HRun=2;HaplotypeScore=127.9900;InbreedingCoeff=0.9896;MQ=93.45;MQ0=0;MQRankSum=-7.761;QD=30.08;ReadPosRankSum=-0.574;VQSLOD=2.7720;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:66.21:851,66,0	0/0:11,0:11:33.11:0,33,494	0/0:36,0:36:99:0,102,1471	0/0:24,0:24:63.19:0,63,895	0/0:31,0:31:93.27:0,93,1365	1/1:2,19:21:57.13:715,57,0	0/0:21,0:21:63.20:0,63,922	0/0:36,0:36:99:0,108,1602	0/0:23,0:23:66.22:0,66,988	0/0:35,0:35:99:0,105,1518	0/0:28,0:28:78.26:0,78,1166	0/0:19,0:19:57.17:0,57,816	0/0:18,0:18:51.16:0,51,740	0/0:23,0:23:60.20:0,60,898	0/0:27,0:27:75.18:0,75,1068	0/0:25,0:25:75.25:0,75,1123	0/0:30,0:30:84.24:0,84,1197	0/0:5,0:5:15.01:0,15,200	0/0:23,0:22:69.23:0,69,1028	0/0:22,0:22:66.22:0,66,971	0/0:16,0:16:45.15:0,45,674	0/0:25,0:25:75.24:0,75,1098	0/0:16,0:16:48.16:0,48,719	0/0:27,0:27:75.19:0,75,1061	0/0:24,0:24:66.21:0,66,970	0/0:21,0:21:63.21:0,63,944	0/0:38,0:36:99:0,108,1617	0/0:8,0:8:21.07:0,21,309
chr10	80172587	.	T	TA	5409.34	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=11.793;DP=451;FS=10.522;HRun=4;HaplotypeScore=167.3839;InbreedingCoeff=0.9096;MQ=65.28;MQ0=1;MQRankSum=-11.219;QD=16.24;ReadPosRankSum=1.207;VQSLOD=3.3191;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,2:20:43.56:275,44,0	1/1:9,0:9:15.04:120,15,0	0/0:20,0:13:29.90:0,30,287	0/0:16,0:11:17.40:0,17,169	1/1:18,0:18:44.44:217,44,0	1/1:1,15:17:33:512,33,0	0/0:13,0:13:33.05:0,33,358	1/1:27,0:29:53.58:314,54,0	0/0:9,0:9:18.03:0,18,194	1/1:21,0:22:43.84:256,44,0	1/1:27,0:28:64.47:349,64,0	0/0:9,0:9:27.08:0,27,306	1/1:5,8:14:38.88:413,39,0	1/1:1,8:13:36.11:447,36,0	1/1:3,1:7:17.05:105,17,0	0/0:16,0:16:42.09:0,42,457	1/1:14,0:16:24.02:136,24,0	0/1:6,0:6:4.31:35,0,4	1/1:16,0:17:33.17:182,33,0	1/1:26,0:28:53.16:290,53,0	1/1:2,0:3:3.48:32,3,0	0/0:13,0:13:30.08:0,30,340	0/0:10,0:10:30.09:0,30,340	0/0:12,0:12:30.08:0,30,340	1/1:22,0:22:37.66:242,38,0	1/1:3,20:24:66.19:814,66,0	1/1:26,1:29:60.96:348,61,0	1/1:1,6:10:27.02:324,27,0
chr10	80172591	.	AC	A	4828.39	PASS	AB=0.667;AC=37;AF=0.661;AN=56;BaseQRankSum=11.792;DP=442;FS=9.852;HRun=1;HaplotypeScore=155.8310;InbreedingCoeff=0.8821;MQ=60.81;MQ0=1;MQRankSum=-10.567;QD=14.50;ReadPosRankSum=2.255;VQSLOD=3.9003;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,6:20:43.03:324,43,0	1/1:4,5:9:22.48:171,22,0	0/0:17,0:11:10.55:0,11,362	0/0:14,0:9:9.97:0,10,176	1/1:6,12:18:41.92:346,42,0	1/1:17,0:17:20.26:148,20,0	0/0:12,0:12:33.11:0,33,458	1/1:19,11:30:42.86:429,43,0	0/0:7,0:7:18.03:0,18,218	1/1:11,11:22:19.60:309,20,0	1/1:8,19:27:72.47:609,72,0	0/0:9,0:9:27.09:0,27,399	1/1:12,1:13:17.57:106,18,0	1/1:14,0:14:26.92:93,27,0	1/1:6,2:8:17.05:141,17,0	0/0:14,0:14:42.12:0,42,587	1/1:7,7:14:26.41:214,26,0	0/1:3,3:6:13.92:49,0,14	1/1:11,5:16:26.90:211,27,0	1/1:15,15:29:46.47:449,46,0	1/1:1,1:2:6.01:61,6,0	0/0:14,0:14:36.08:0,36,508	0/0:10,0:10:30.10:0,30,458	0/0:11,0:11:30:0,30,458	1/1:8,13:21:39.83:408,40,0	1/1:26,0:26:49.86:209,50,0	1/1:14,15:29:38.39:489,38,0	1/1:11,0:11:11.93:60,12,0
chr10	80172601	.	CAAAAAAA	C	4163.63	PASS	AB=0.705;AC=21;AF=0.375;AN=56;BaseQRankSum=3.844;DP=480;FS=0.000;HRun=15;HaplotypeScore=210.6842;InbreedingCoeff=0.1968;MQ=56.43;MQ0=3;MQRankSum=-4.179;QD=14.11;ReadPosRankSum=1.252;VQSLOD=0.1879;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:15.18:0,15,305	0/1:6,3:9:2.31:98,0,2	0/0:27,0:15:27.09:0,27,591	0/0:15,0:6:12.93:0,13,282	1/1:12,7:20:12.65:347,13,0	0/0:15,0:15:43.08:0,43,381	0/0:12,0:13:33.11:0,33,1026	0/1:17,10:27:30.04:548,0,30	0/0:6,0:6:12.04:0,12,349	0/1:14,8:22:4.54:506,0,5	1/1:20,10:30:20.82:440,21,0	0/0:13,0:13:33.11:0,33,841	0/0:3,0:14:27.11:0,27,229	0/1:5,4:16:24.98:25,0,91	0/1:5,4:10:23.37:66,0,23	0/0:9,0:11:21.07:0,21,763	1/1:9,5:14:9.35:157,9,0	0/1:5,0:6:65.99:66,0,78	1/1:7,11:18:35.84:480,36,0	0/1:21,10:30:27.27:555,0,27	0/1:2,0:3:19.25:53,0,19	0/0:17,0:18:54.14:0,54,1524	0/0:13,0:16:39.13:0,39,1106	0/0:15,0:15:36.59:0,37,1164	0/1:15,5:20:23.12:185,0,23	0/1:5,5:26:68.91:146,0,69	1/1:19,11:31:21.56:466,22,0	0/1:3,0:12:28.79:29,0,109
chr10	80172603	.	A	AC	2275.99	PASS	AB=0.854;AC=36;AF=0.643;AN=56;BaseQRankSum=12.074;DP=471;FS=12.428;HRun=0;HaplotypeScore=169.6768;InbreedingCoeff=0.6476;MQ=56.54;MQ0=3;MQRankSum=-5.654;QD=6.30;ReadPosRankSum=4.361;VQSLOD=2.8143;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:6.45:68,6,0	1/1:3,6:9:16.65:88,17,0	0/1:29,0:14:5.51:6,0,70	0/0:17,0:6:11.11:0,11,91	1/1:10,10:20:20.97:139,21,0	1/1:15,0:15:1.21:10,1,0	0/0:14,0:14:36.92:0,37,370	0/1:22,5:27:7.98:162,0,8	0/0:5,0:5:12:0,12,116	1/1:15,7:22:28.03:200,28,0	1/1:15,15:30:35.84:233,36,0	0/0:13,0:13:36.61:0,37,309	1/1:13,0:13:11.24:66,11,0	1/1:16,0:16:33.07:149,33,0	1/1:8,2:10:18.58:83,19,0	0/0:11,0:11:27.94:0,28,314	1/1:8,4:12:16.74:93,17,0	0/1:3,2:5:9.28:34,0,9	0/1:15,3:18:17:67,0,17	1/1:22,8:29:31.15:254,31,0	1/1:2,1:3:5.02:20,5,0	0/0:19,0:19:51.03:0,51,555	0/0:17,0:17:42.82:0,43,398	0/0:14,0:14:36.05:0,36,376	1/1:9,10:19:35.97:198,36,0	1/1:24,0:24:54.60:246,55,0	1/1:19,11:30:27.39:242,27,0	1/1:12,0:12:28.51:122,29,0
chr10	80172605	.	A	AC	646.49	PASS	AB=0.751;AC=12;AF=0.214;AN=56;BaseQRankSum=9.714;DP=476;FS=27.015;HRun=0;HaplotypeScore=172.7335;InbreedingCoeff=-0.0889;MQ=59.05;MQ0=4;MQRankSum=-6.717;QD=2.90;ReadPosRankSum=5.264;VQSLOD=1.6454;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:41.83:0,42,332	1/1:3,6:9:2.67:41,3,0	0/0:32,0:16:17.31:0,17,113	0/0:19,0:7:11.82:0,12,106	0/1:10,10:20:29.54:122,0,30	0/0:15,0:15:45.09:0,45,478	0/0:15,0:15:37.29:0,37,379	0/1:22,5:27:22.65:23,0,148	0/0:5,0:5:12.01:0,12,122	0/1:15,7:22:62.84:63,0,76	0/1:13,15:28:12.61:199,0,13	0/0:13,0:13:35.89:0,36,322	0/0:13,0:13:25.85:0,26,102	0/0:16,0:16:11.98:0,12,78	0/1:8,2:10:20.47:23,0,20	0/0:11,0:11:28.29:0,28,313	0/1:7,4:11:7.17:34,0,7	0/0:3,2:5:6.23:0,6,49	0/1:15,3:18:55.12:55,0,82	0/1:22,8:29:34.23:34,0,109	0/0:3,0:3:3.59:0,4,10	0/0:19,0:19:54.07:0,54,604	0/0:18,0:18:48.88:0,49,465	0/0:15,0:15:42.04:0,42,428	0/1:9,10:19:9.44:89,0,9	0/0:24,0:24:10.60:0,11,122	0/1:18,11:29:71.03:111,0,71	0/0:12,0:12:24.42:0,24,97
chr10	80172723	.	TA	T	9784.99	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=7.788;DP=418;FS=15.155;HRun=5;HaplotypeScore=48.4589;InbreedingCoeff=0.9616;MQ=65.49;MQ0=0;MQRankSum=-4.816;QD=28.78;ReadPosRankSum=3.199;VQSLOD=3.6610;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,9:11:27.08:306,27,0	1/1:1,8:9:21.06:238,21,0	0/0:12,0:9:12.10:0,12,259	0/0:8,0:8:20.91:0,21,242	1/1:3,33:36:96.27:1084,96,0	1/1:0,13:13:39.11:442,39,0	0/0:7,0:7:20.43:0,20,254	1/1:1,25:26:75.18:829,75,0	0/0:8,0:8:18.05:0,18,232	1/1:1,20:21:54.15:611,54,0	1/1:2,20:22:54.15:610,54,0	0/0:11,0:11:30.09:0,30,394	1/1:0,7:7:18.05:204,18,0	1/1:0,12:12:27.08:306,27,0	1/1:0,12:12:33.09:373,33,0	0/0:12,0:12:36.11:0,36,477	1/1:1,14:15:36.10:405,36,0	1/1:3,14:17:39.11:442,39,0	1/1:1,22:23:63.17:706,63,0	1/1:1,20:21:57.16:645,57,0	1/1:0,9:9:24.07:272,24,0	0/0:2,0:2:3.01:0,3,41	0/0:9,0:9:27.09:0,27,368	0/0:9,0:9:24.08:0,24,328	1/1:3,19:22:48.14:544,48,0	1/1:1,15:16:45.13:510,45,0	1/1:2,16:18:45.13:511,45,0	1/1:2,28:30:65.85:747,66,0
chr10	80172784	.	G	GA	1062.59	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.173;DP=495;FS=2.475;HRun=4;HaplotypeScore=61.7442;InbreedingCoeff=0.9964;MQ=81.06;MQ0=0;MQRankSum=-1.995;QD=30.36;ReadPosRankSum=0.958;VQSLOD=4.0121;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:36.04:446,36,0	0/0:11,0:11:27.08:0,27,306	0/0:14,0:14:30.07:0,30,332	0/0:18,0:18:48.14:0,48,543	0/0:28,0:28:75.21:0,75,846	1/1:2,20:22:54.18:738,54,0	0/0:12,0:12:30.08:0,30,340	0/0:21,0:21:60.16:0,60,673	0/0:13,0:13:33.08:0,33,366	0/0:27,0:27:81.23:0,81,919	0/0:21,0:21:60.17:0,60,680	0/0:14,0:14:42.10:0,42,467	0/0:11,0:11:30.09:0,30,340	0/0:14,0:14:33.09:0,33,374	0/0:10,0:10:24.07:0,24,272	0/0:16,0:16:48.14:0,48,545	0/0:17,0:17:45.13:0,45,510	0/0:11,0:11:27.08:0,27,306	0/0:18,0:18:48.14:0,48,544	0/0:30,0:30:81.23:0,81,919	0/0:14,0:14:42.12:0,42,476	0/0:13,0:13:39.11:0,39,442	0/0:24,0:24:66.19:0,66,748	0/0:11,0:11:30.09:0,30,340	0/0:21,0:21:51.14:0,51,578	0/0:26,0:26:78.22:0,78,882	0/0:25,0:25:69.20:0,69,780	0/0:20,0:20:57.16:0,57,646
chr10	80173017	.	T	TG	4242.59	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=17.704;DP=528;FS=23.123;HRun=0;HaplotypeScore=149.5448;InbreedingCoeff=0.9633;MQ=81.15;MQ0=0;MQRankSum=-15.965;QD=23.70;ReadPosRankSum=2.944;VQSLOD=3.5255;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.12:0,63,803	1/1:1,5:7:20.92:163,21,0	0/0:20,0:20:57.11:0,57,708	0/0:15,0:16:13.73:0,14,495	1/1:2,27:29:86.14:652,86,0	0/0:40,0:40:99:0,120,1677	0/0:18,0:18:51.15:0,51,690	1/1:3,19:22:66.06:624,66,0	0/0:27,0:27:75.25:0,75,1048	1/1:4,20:23:65.79:594,66,0	1/1:2,16:18:50.78:389,51,0	0/0:25,0:25:69.17:0,69,896	0/0:34,0:34:99:0,102,1408	0/0:19,0:19:57.18:0,57,779	1/1:0,17:17:50.87:401,51,0	0/0:24,0:24:69.21:0,69,947	1/1:0,7:7:20.95:174,21,0	1/1:0,1:1:3:27,3,0	1/1:3,7:10:24.03:238,24,0	1/1:0,8:8:23.92:188,24,0	1/1:1,4:5:8.98:73,9,0	0/0:23,0:23:69.23:0,69,965	0/0:19,0:19:57.19:0,57,795	0/0:21,0:21:63.20:0,63,864	1/1:1,17:18:50.89:403,51,0	0/0:28,0:28:84.27:0,84,1160	1/1:0,13:13:38.92:317,39,0	0/0:12,0:12:36.12:0,36,503
chr10	80173020	.	TGTTTGTTTA	T	12392.80	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=17.920;DP=519;FS=21.198;HRun=0;HaplotypeScore=205.5117;InbreedingCoeff=0.9660;MQ=81.56;MQ0=0;MQRankSum=-16.921;QD=72.47;ReadPosRankSum=4.464;VQSLOD=3.1212;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.22:0,63,3096	1/1:2,5:7:21.07:504,21,0	0/0:21,0:21:60.21:0,60,2510	0/0:15,0:15:38.34:0,38,1497	1/1:1,27:28:84.29:2053,84,0	0/0:42,0:42:99:0,123,6131	0/0:17,0:17:51.18:0,51,2435	1/1:1,19:20:57.17:1530,57,0	0/0:27,0:27:78.73:0,79,3612	1/1:3,20:22:63.20:1619,63,0	1/1:1,16:17:51.17:1234,51,0	0/0:24,0:24:72.25:0,72,3526	0/0:34,0:34:99:0,102,4909	0/0:18,0:18:54.19:0,54,2733	1/1:1,16:17:51.18:1280,51,0	0/0:22,0:22:66.21:0,66,3216	1/1:1,6:7:21.07:510,21,0	1/1:0,1:1:3.01:80,3,0	1/1:2,7:9:21.03:505,21,0	1/1:0,8:8:24.08:613,24,0	1/1:0,4:4:9.03:231,9,0	0/0:23,0:23:69.24:0,69,3391	0/0:20,0:20:60.19:0,60,2589	0/0:22,0:22:63.20:0,63,2994	1/1:0,17:17:48.16:1226,48,0	0/0:27,0:27:81.28:0,81,3924	1/1:0,13:13:39.13:1007,39,0	0/0:15,0:15:45.15:0,45,2231
chr10	80173193	.	GCA	G	434.55	PASS	AB=0.900;AC=12;AF=0.214;AN=56;BaseQRankSum=8.248;DP=582;FS=34.195;HRun=0;HaplotypeScore=138.5675;InbreedingCoeff=-0.2600;MQ=49.95;MQ0=18;MQRankSum=-7.036;QD=1.91;ReadPosRankSum=-3.288;VQSLOD=0.1320;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,11:39:44.48:44,0,404	0/1:7,0:7:5.49:5,0,82	0/0:21,0:7:12.02:0,12,152	0/0:10,0:5:6.91:0,7,94	0/1:18,0:18:5.66:6,0,92	0/0:24,0:24:44.27:0,44,612	0/0:25,0:23:54.18:0,54,898	0/0:35,0:30:72.68:0,73,1129	0/0:24,0:24:53.21:0,53,842	0/1:15,0:14:11.35:11,0,164	0/1:9,0:9:16.12:16,0,89	0/0:29,0:29:75.26:0,75,1256	0/1:19,9:26:99:115,0,416	0/1:24,13:37:28.82:29,0,658	0/1:9,0:9:5.65:6,0,92	0/0:18,0:18:42.13:0,42,679	0/0:14,0:14:23.77:0,24,403	0/0:14,0:14:26.44:0,26,388	0/0:16,0:15:32.77:0,33,487	0/1:15,0:14:12.93:13,0,185	0/0:45,0:40:51.17:0,51,839	0/0:21,0:21:51.16:0,51,829	0/0:25,0:25:69.24:0,69,1164	0/0:28,0:28:60.21:0,60,1012	0/1:16,0:16:42.27:42,0,131	0/1:22,9:30:99:258,0,779	0/0:6,0:6:9.03:0,9,143	0/1:2,1:3:32.59:33,0,45
chr10	80173207	.	G	GCA	319.75	PASS	AB=0.980;AC=13;AF=0.232;AN=56;BaseQRankSum=7.704;DP=580;FS=5.457;HRun=0;HaplotypeScore=153.9819;InbreedingCoeff=-0.1447;MQ=47.64;MQ0=20;MQRankSum=-7.221;QD=1.85;ReadPosRankSum=1.822;VQSLOD=2.2614;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:39.83:0,40,490	0/1:6,0:6:17.26:17,0,68	1/1:16,0:4:2.97:20,3,0	0/0:10,0:4:1.81:0,2,5	0/1:18,0:17:20.41:20,0,33	0/1:21,0:21:6.51:7,0,241	0/0:26,0:24:39.13:0,39,502	0/0:32,0:25:38.92:0,39,436	0/0:24,0:24:53.91:0,54,639	0/1:17,0:16:76.81:77,0,100	0/1:7,0:7:48.89:49,0,62	0/0:30,0:30:63.19:0,63,794	0/0:26,0:24:36.12:0,36,463	0/0:37,0:37:30.19:0,30,386	0/1:9,2:11:19.71:20,0,34	0/0:18,0:18:39.13:0,39,502	0/1:14,1:15:43.22:43,0,214	0/1:16,0:16:5.45:5,0,158	0/1:14,0:13:65.40:65,0,205	0/1:17,0:16:42.52:43,0,65	0/0:49,1:43:30.10:0,30,387	0/0:21,0:21:51.17:0,51,656	0/0:25,0:25:69.22:0,69,883	0/0:26,0:26:60.67:0,61,773	0/1:15,0:15:56.40:102,0,56	0/0:32,0:31:81.10:0,81,1033	0/0:3,0:3:6.02:0,6,77	0/0:5,0:5:12.04:0,12,153
chr10	80173219	.	GCACACACACATGCA	G	3798.33	PASS	AB=1.000;AC=25;AF=0.463;AN=54;BaseQRankSum=4.840;DP=608;FS=0.522;HRun=0;HaplotypeScore=241.1687;InbreedingCoeff=0.8419;MQ=46.74;MQ0=25;MQRankSum=-4.464;QD=15.13;ReadPosRankSum=-2.692;VQSLOD=1.4752;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:25.91:0,26,635	1/1:1,6:7:6.02:211,6,0	0/0:23,0:9:21.01:0,21,284	0/0:25,0:13:20.16:0,20,373	1/1:4,14:16:3.01:121,3,0	0/0:19,0:19:17.05:0,17,293	0/0:23,0:21:47.98:0,48,1284	1/1:28,0:21:21.43:290,21,0	0/0:21,0:21:51.16:0,51,1905	1/1:6,16:19:24.09:449,24,0	1/1:1,8:9:9.03:321,9,0	0/1:25,0:25:9.68:10,0,2247	0/0:28,0:26:29.66:0,30,656	0/0:39,0:39:31.89:0,32,392	1/1:10,1:11:8.19:191,8,0	0/0:20,0:20:44.64:0,45,1524	1/1:18,0:18:9.57:332,10,0	1/1:16,0:17:17.08:260,17,0	1/1:6,9:14:24.75:361,25,0	1/1:2,16:17:9.03:276,9,0	1/1:46,0:40:30.53:384,31,0	0/0:20,0:20:45.02:0,45,1770	0/0:28,0:28:49.72:0,50,3140	0/0:25,0:26:51.77:0,52,2200	1/1:3,14:17:15.05:592,15,0	0/0:33,0:32:75.55:0,76,1570	./.	0/0:6,0:6:9:0,9,141
chr10	80173229	.	ATG	A	791.22	PASS	AB=0.964;AC=19;AF=0.352;AN=54;BaseQRankSum=5.026;DP=602;FS=3.067;HRun=0;HaplotypeScore=156.9400;InbreedingCoeff=0.1981;MQ=47.20;MQ0=21;MQRankSum=-5.473;QD=3.07;ReadPosRankSum=-0.202;VQSLOD=2.8593;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:42.40:0,42,686	1/1:6,0:6:5.91:52,6,0	0/0:40,0:15:41.08:0,41,590	0/1:34,1:18:10.93:11,0,617	1/1:17,0:15:2.88:15,3,0	0/1:17,0:17:25.87:26,0,166	0/0:23,0:22:51.02:0,51,908	0/1:22,3:20:96.34:96,0,131	0/0:23,0:23:27.40:0,27,913	0/1:22,0:20:74.27:74,0,76	1/1:8,0:8:8.88:75,9,0	0/0:26,0:26:74.69:0,75,1275	0/0:27,0:25:32.86:0,33,578	0/0:37,0:37:38.75:0,39,697	0/1:8,0:8:7.57:8,0,19	0/0:18,0:18:47.82:0,48,814	0/1:13,1:14:36.29:59,0,36	0/1:16,2:17:36.83:92,0,37	0/1:15,0:12:80.49:126,0,80	1/1:17,0:16:2.63:27,3,0	0/1:39,1:35:4.30:201,0,4	0/0:19,0:19:53.88:0,54,987	0/0:28,0:28:81.24:0,81,1475	0/0:24,0:24:59.56:0,60,983	1/1:15,0:15:14.62:99,15,0	0/0:30,0:29:77.13:0,77,1352	./.	0/0:5,0:5:9.03:0,9,174
chr10	80173231	.	GCA	G	1702.77	PASS	AB=0.874;AC=28;AF=0.519;AN=54;BaseQRankSum=4.467;DP=597;FS=0.000;HRun=0;HaplotypeScore=152.0769;InbreedingCoeff=0.5639;MQ=47.02;MQ0=21;MQRankSum=-1.163;QD=5.81;ReadPosRankSum=-0.549;VQSLOD=3.0449;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:38:29.64:0,30,329	1/1:6,0:6:3:29,3,0	0/0:45,0:18:45.10:0,45,674	0/0:36,0:19:13.76:0,14,501	1/1:15,1:15:3.01:31,3,0	0/0:16,0:16:12.39:0,12,63	0/0:18,0:20:21.96:0,22,486	1/1:11,11:18:32.21:368,32,0	0/1:20,3:23:28.97:29,0,528	1/1:21,1:20:21.07:278,21,0	1/1:8,0:8:9:90,9,0	0/1:22,4:26:37.44:37,0,882	0/0:26,0:24:26.66:0,27,189	0/0:36,0:36:29.37:0,29,212	1/1:1,5:7:8.90:99,9,0	0/1:15,3:18:33.75:34,0,441	1/1:4,9:14:3.55:207,4,0	1/1:11,5:15:6.02:72,6,0	1/1:15,0:12:13.96:180,14,0	1/1:17,0:16:9.02:92,9,0	1/1:20,22:37:14.77:160,15,0	0/0:16,1:18:18.62:0,19,750	0/0:26,0:27:14.52:0,15,843	0/1:21,3:24:61.51:62,0,526	1/1:14,1:15:14.90:133,15,0	0/0:30,0:29:53.55:0,54,380	./.	0/0:5,0:5:8.93:0,9,64
chr10	80173236	.	C	CACACATGT	229.57	PASS	AB=0.924;AC=6;AF=0.111;AN=54;BaseQRankSum=2.771;DP=632;FS=3.653;HRun=0;HaplotypeScore=216.9528;InbreedingCoeff=-0.1171;MQ=48.67;MQ0=20;MQRankSum=-2.434;QD=1.59;ReadPosRankSum=-1.521;VQSLOD=2.5447;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:47.46:47,0,407	0/0:7,0:7:2.82:0,3,16	0/0:50,0:23:27.63:0,28,1268	0/0:44,0:23:61.10:0,61,1238	0/0:19,0:17:5.89:0,6,56	0/1:3,11:18:44.58:125,0,45	0/0:19,0:18:39.12:0,39,973	0/0:25,0:22:14.43:0,14,539	0/0:21,0:21:47.99:0,48,1198	0/0:24,0:22:30.96:0,31,303	0/0:9,0:9:3.28:0,3,10	0/0:29,0:29:81.28:0,81,1991	0/1:27,0:25:22.77:23,0,81	0/0:38,0:38:29:0,29,158	0/0:8,0:8:11.84:0,12,149	0/0:17,0:17:45.15:0,45,1049	0/1:15,0:15:5.44:5,0,215	0/1:18,0:17:3.63:4,0,92	0/0:20,0:18:41.70:0,42,526	0/0:18,0:17:11.77:0,12,121	0/0:45,0:40:21.01:0,21,274	0/0:19,0:19:57.18:0,57,1451	0/0:28,0:28:75.24:0,75,1797	0/0:22,0:22:48.16:0,48,1190	0/0:16,0:16:14.50:0,14,89	0/1:28,0:27:99:138,0,211	./.	0/0:5,0:5:8.68:0,9,46
chr10	80173240	.	C	CATGT	551.04	PASS	AB=0.950;AC=10;AF=0.185;AN=54;BaseQRankSum=6.735;DP=637;FS=2.052;HRun=0;HaplotypeScore=181.7848;InbreedingCoeff=0.6536;MQ=50.90;MQ0=19;MQRankSum=-0.620;QD=3.65;ReadPosRankSum=1.245;VQSLOD=2.6544;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,4:36:42.02:42,0,585	0/0:7,0:7:3.01:0,3,33	0/0:53,0:25:53.38:0,53,1237	0/0:48,0:27:62.23:0,62,1105	0/0:20,0:18:6:0,6,89	0/1:17,0:17:58.44:58,0,90	0/0:19,0:18:39.13:0,39,751	0/0:26,0:23:57.18:0,57,822	0/0:21,0:21:51.17:0,51,946	0/0:27,0:25:39.99:0,40,481	0/0:9,0:9:8.20:0,8,86	0/0:28,0:28:81.27:0,81,1542	1/1:26,0:24:28.14:146,28,0	1/1:40,0:40:25.95:120,26,0	0/0:8,0:8:12.02:0,12,162	0/0:17,0:17:45.14:0,45,815	0/0:15,0:15:30.09:0,30,401	0/0:17,0:16:16.75:0,17,189	0/0:23,0:20:45.14:0,45,688	0/0:18,0:17:12.04:0,12,161	0/0:39,0:35:23.68:0,24,318	0/0:21,0:21:63.19:0,63,1177	0/0:27,0:27:81.26:0,81,1516	0/0:21,0:21:48.16:0,48,884	0/0:16,0:16:15.04:0,15,183	1/1:27,0:26:41.68:310,42,0	./.	1/1:5,0:5:8.29:37,8,0
chr10	80173241	.	A	ATG	2615.88	PASS	AB=0.986;AC=10;AF=0.185;AN=54;BaseQRankSum=-0.787;DP=637;FS=0.588;HRun=0;HaplotypeScore=155.0816;InbreedingCoeff=0.6768;MQ=51.28;MQ0=19;MQRankSum=-1.587;QD=17.56;ReadPosRankSum=0.943;VQSLOD=3.4082;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:35,1:36:15.93:16,0,457	0/0:7,0:7:5.91:0,6,38	0/0:55,0:27:62.04:0,62,1045	0/0:50,0:27:69.22:0,69,961	0/0:20,0:18:5.98:0,6,61	0/1:16,0:16:37.46:37,0,74	0/0:19,0:18:42.09:0,42,626	0/0:26,0:23:59.93:0,60,620	0/0:21,0:21:51.13:0,51,758	0/0:26,0:25:42.68:0,43,384	0/0:9,0:9:11.87:0,12,102	0/0:28,0:28:81.21:0,81,1231	1/1:2,22:23:29.99:584,30,0	1/1:0,40:40:32.71:645,33,0	0/0:8,0:8:11.82:0,12,111	0/0:16,0:17:44.94:0,45,640	0/0:15,0:15:31.17:0,31,289	0/0:16,1:16:14.56:0,15,123	0/0:22,0:20:47.89:0,48,565	0/0:18,0:17:11.94:0,12,107	0/0:38,0:34:20.89:0,21,219	0/0:21,0:21:61.07:0,61,940	0/0:27,0:27:81.22:0,81,1232	0/0:21,0:21:48.57:0,49,702	0/0:16,0:16:17.80:0,18,132	1/1:2,25:26:69.71:1313,70,0	./.	1/1:0,5:5:9.03:183,9,0
chr10	80173436	.	AT	A	963.83	PASS	AB=0.736;AC=13;AF=0.241;AN=54;BaseQRankSum=10.169;DP=290;FS=13.492;HRun=1;HaplotypeScore=51.7761;InbreedingCoeff=-0.1785;MQ=72.05;MQ0=0;MQRankSum=-8.934;QD=8.31;ReadPosRankSum=0.781;VQSLOD=-0.6481;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.11:0,57,805	0/1:2,3:5:16.34:45,0,16	0/0:6,0:6:17.99:0,18,218	0/0:7,0:7:8.98:0,9,108	0/1:8,4:12:11.31:83,0,11	0/0:21,0:21:63.20:0,63,900	0/0:10,0:10:30.07:0,30,400	0/1:14,15:29:99:429,0,270	0/0:20,0:20:60.12:0,60,796	0/1:2,4:6:28.36:82,0,28	0/1:4,4:8:33.85:147,0,34	0/0:15,0:15:45.15:0,45,658	0/0:3,0:3:6:0,6,57	0/0:4,0:4:9.01:0,9,85	0/1:3,2:5:44.41:49,0,44	0/0:17,0:16:51.14:0,51,693	0/1:5,5:10:38.41:107,0,38	1/1:1,1:2:3.01:41,3,0	0/1:7,3:10:71.37:71,0,159	0/0:6,0:6:15.01:0,15,141	0/0:1,0:1:2.96:0,3,19	0/0:20,0:20:60.17:0,60,823	0/0:14,0:14:42.14:0,42,610	0/0:8,0:8:24.08:0,24,351	0/1:7,1:8:7.97:8,0,66	0/1:7,1:8:16.87:17,0,149	0/1:11,2:13:32.66:33,0,141	./.
chr10	80173628	.	T	TA	6384.59	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=10.750;DP=378;FS=24.464;HRun=6;HaplotypeScore=55.1014;InbreedingCoeff=0.9801;MQ=82.07;MQ0=0;MQRankSum=-3.955;QD=30.40;ReadPosRankSum=0.169;VQSLOD=2.8808;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:18.73:0,19,319	1/1:0,3:3:9.03:113,9,0	0/0:17,1:18:18.88:0,19,373	0/0:13,0:13:31.62:0,32,309	1/1:2,12:14:30.10:377,30,0	0/0:13,0:13:39.09:0,39,398	0/0:12,0:12:27.04:0,27,269	1/1:6,18:24:51.15:627,51,0	0/0:17,0:17:48.09:0,48,483	1/1:2,11:13:30.10:377,30,0	1/1:1,8:9:24.03:284,24,0	0/0:18,0:18:48.11:0,48,490	1/1:1,8:9:21.07:264,21,0	1/1:0,11:11:33.11:415,33,0	1/1:1,15:16:39.12:491,39,0	0/0:17,0:17:45.10:0,45,459	1/1:3,8:11:22.62:268,23,0	1/1:0,4:4:12.04:151,12,0	1/1:1,15:16:45.14:565,45,0	1/1:0,10:10:30.10:377,30,0	1/1:1,6:7:18.06:226,18,0	0/0:16,0:16:48.10:0,48,483	0/0:18,0:18:54.12:0,54,551	0/0:13,0:13:36.05:0,36,359	1/1:3,11:14:33.11:415,33,0	1/1:5,18:23:51.16:642,51,0	1/1:3,17:20:48.15:603,48,0	1/1:1,5:6:15.05:189,15,0
chr10	80174048	.	T	TAA	8981.61	PASS	AB=0.857;AC=33;AF=0.635;AN=52;BaseQRankSum=-0.417;DP=256;FS=5.136;HRun=0;HaplotypeScore=46.4518;InbreedingCoeff=0.8151;MQ=74.63;MQ0=0;MQRankSum=-1.391;QD=47.52;ReadPosRankSum=-0.308;VQSLOD=5.7313;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:33.11:0,33,535	1/1:2,0:2:5.98:47,6,0	0/0:4,0:4:9.43:0,9,83	0/1:5,0:6:15.66:16,0,50	1/1:5,6:11:33:486,33,0	0/0:26,0:25:72.19:0,72,1059	0/0:3,0:3:9.02:0,9,123	1/1:1,45:47:99:2617,141,0	0/0:5,0:5:15.03:0,15,198	1/1:1,10:11:33.11:637,33,0	1/1:3,6:9:24.05:413,24,0	0/0:5,0:5:12.01:0,12,167	1/1:3,0:4:12.01:116,12,0	./.	1/1:0,6:6:15.05:304,15,0	0/0:5,0:5:15.03:0,15,199	1/1:1,14:16:39.09:746,39,0	1/1:0,8:8:18.01:322,18,0	1/1:1,17:18:51.16:999,51,0	1/1:0,7:7:20.94:296,21,0	1/1:0,1:1:3.01:60,3,0	./.	0/0:4,0:4:12.03:0,12,166	0/0:2,0:2:6.01:0,6,74	1/1:1,10:12:24.07:451,24,0	1/1:1,11:13:36.07:585,36,0	1/1:2,7:9:27.08:502,27,0	1/1:1,8:9:21.03:385,21,0
chr10	80174098	.	ATG	A	6862.05	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=5.774;DP=285;FS=1.826;HRun=0;HaplotypeScore=62.4177;InbreedingCoeff=0.7686;MQ=68.21;MQ0=1;MQRankSum=-1.669;QD=27.67;ReadPosRankSum=1.614;VQSLOD=5.5534;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,10:12:21.07:272,21,0	1/1:0,1:1:3.01:39,3,0	0/1:14,0:9:12.89:13,0,24	0/1:12,0:7:0.64:1,0,92	1/1:7,21:28:57.01:757,57,0	1/1:3,11:14:27.06:334,27,0	0/0:9,0:9:24.04:0,24,330	1/1:17,18:35:75.23:950,75,0	0/0:7,0:7:21.05:0,21,329	1/1:2,8:10:30.05:359,30,0	1/1:1,14:15:45.08:562,45,0	0/0:4,0:4:9.03:0,9,153	1/1:0,10:10:30.10:389,30,0	1/1:0,5:5:15.05:194,15,0	1/1:0,8:8:24.08:311,24,0	0/0:6,0:6:18.06:0,18,306	1/1:4,10:14:33.09:413,33,0	1/1:0,6:6:18.06:234,18,0	1/1:7,10:17:45.14:571,45,0	1/1:2,6:8:21.04:256,21,0	1/1:1,6:7:15.05:195,15,0	0/0:2,0:2:6.01:0,6,76	0/0:6,0:6:18.06:0,18,306	0/0:3,0:3:9.03:0,9,153	1/1:2,8:10:24.08:311,24,0	1/1:1,9:10:29.98:353,30,0	1/1:3,6:9:27:311,27,0	1/1:2,1:3:3.01:39,3,0
chr10	80174129	.	TAC	T	2611.29	PASS	AB=0.867;AC=35;AF=0.700;AN=50;BaseQRankSum=5.808;DP=401;FS=3.870;HRun=0;HaplotypeScore=86.9774;InbreedingCoeff=0.3677;MQ=54.18;MQ0=15;MQRankSum=-3.113;QD=9.67;ReadPosRankSum=0.443;VQSLOD=3.3142;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:16:14.05:0,14,132	1/1:2,2:4:6.02:67,6,0	./.	./.	1/1:19,8:29:35.74:350,36,0	0/1:18,1:17:0.07:0,0,392	0/0:10,0:10:9.03:0,9,136	0/1:23,2:25:3.51:134,0,4	0/1:12,1:13:3.18:3,0,373	1/1:12,2:15:17.84:160,18,0	0/1:11,3:18:4.45:121,0,4	0/1:6,1:7:18.22:18,0,163	1/1:5,5:11:17.88:180,18,0	1/1:2,6:8:18.05:200,18,0	1/1:1,5:6:12.03:133,12,0	0/0:8,0:8:15.05:0,15,226	1/1:8,7:16:19.86:204,20,0	1/1:5,2:7:3.01:33,3,0	1/1:9,2:11:6.01:67,6,0	1/1:5,9:15:32.64:317,33,0	1/1:8,4:11:9.02:100,9,0	0/1:4,0:4:16.06:16,0,58	0/0:7,0:7:9.03:0,9,136	0/1:3,3:6:50.77:85,0,51	1/1:10,4:15:14.87:146,15,0	1/1:11,8:20:29.89:304,30,0	1/1:6,2:9:14.86:137,15,0	./.
chr10	80174227	.	T	TA	5532.62	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-4.737;DP=324;FS=3.213;HRun=7;HaplotypeScore=41.2576;InbreedingCoeff=0.9582;MQ=91.09;MQ0=0;MQRankSum=-2.727;QD=31.98;ReadPosRankSum=0.585;VQSLOD=4.5997;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:27.04:0,27,260	1/1:0,4:4:12.04:145,12,0	0/0:14,0:14:30:0,30,277	0/0:15,0:15:35.54:0,36,323	1/1:0,16:16:48.15:580,48,0	0/0:21,0:21:51.08:0,51,492	0/0:9,0:9:24.03:0,24,226	1/1:7,29:36:87.25:1039,87,0	0/0:11,0:11:27.04:0,27,261	1/1:0,8:8:24.06:278,24,0	1/1:1,8:9:24.07:290,24,0	0/0:7,0:7:18.02:0,18,174	0/0:10,0:10:30.05:0,30,290	0/0:7,0:7:15.02:0,15,145	1/1:0,5:5:15.05:181,15,0	0/0:10,0:10:30.05:0,30,290	1/1:0,15:15:39.12:471,39,0	1/1:2,11:13:33.10:398,33,0	1/1:2,20:22:57.12:652,57,0	1/1:0,11:11:33.07:383,33,0	1/1:1,11:12:30.09:362,30,0	0/0:2,0:2:6.01:0,6,58	0/0:4,0:4:9.01:0,9,87	0/0:11,0:11:30.04:0,30,290	1/1:0,9:9:27.08:326,27,0	0/0:15,0:15:45.07:0,45,434	1/1:2,11:13:36.10:427,36,0	0/0:4,0:4:9.01:0,9,87
chr10	80174592	.	CA	C	837.51	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.373;DP=412;FS=2.321;HRun=7;HaplotypeScore=39.8981;InbreedingCoeff=0.9796;MQ=74.17;MQ0=0;MQRankSum=-0.132;QD=23.93;ReadPosRankSum=1.664;VQSLOD=3.5747;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.23:0,72,905	0/0:5,0:5:15.05:0,15,188	0/0:6,0:6:18.04:0,18,205	0/0:10,0:10:21.07:0,21,260	0/0:25,0:25:66.20:0,66,815	0/0:18,0:18:45.14:0,45,566	0/0:9,0:9:27.09:0,27,340	0/0:27,0:27:81.26:0,81,1019	0/0:18,0:18:51.16:0,51,641	0/0:11,0:11:30.10:0,30,377	0/0:16,0:16:45.13:0,45,542	0/0:14,0:14:42.13:0,42,527	0/0:18,0:18:51.15:0,51,629	0/0:13,0:13:39.12:0,39,491	0/0:14,0:14:42.13:0,42,528	0/0:11,0:11:33.11:0,33,415	0/0:16,0:16:48.15:0,48,603	0/0:17,0:17:44.51:0,45,534	0/0:21,0:21:57.18:0,57,708	0/0:12,0:12:33.11:0,33,415	0/0:9,0:9:27.07:0,27,326	0/0:12,0:12:33.10:0,33,404	0/0:10,0:10:24.08:0,24,302	0/0:9,0:9:24.06:0,24,289	0/0:7,0:7:21.07:0,21,264	1/1:2,23:25:34.39:653,34,0	0/0:24,0:24:66.21:0,66,830	1/1:0,10:10:30.07:306,30,0
chr10	80174745	.	TC	T	922.29	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.379;DP=442;FS=3.873;HRun=4;HaplotypeScore=82.1449;InbreedingCoeff=0.8024;MQ=81.77;MQ0=0;MQRankSum=-2.697;QD=26.35;ReadPosRankSum=-3.722;VQSLOD=1.4306;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.18:0,57,779	0/0:9,0:9:23.22:0,23,129	0/0:13,0:13:21.13:0,21,406	0/0:11,0:11:23.78:0,24,287	0/0:22,0:22:61.22:0,61,350	0/0:12,0:12:36.12:0,36,504	0/0:11,0:11:33.11:0,33,462	0/0:36,0:36:9.34:0,9,314	0/0:12,0:12:36.12:0,36,503	0/0:18,0:18:43.90:0,44,204	0/0:18,0:18:47.84:0,48,305	0/0:11,0:11:33.10:0,33,444	1/1:0,20:20:48.15:576,48,0	1/1:0,15:15:39.12:468,39,0	0/0:14,0:14:40.10:0,40,207	0/0:11,0:11:30.09:0,30,403	0/0:14,0:14:9.25:0,9,142	0/0:9,0:9:4.54:0,5,118	0/0:20,0:20:3.01:0,3,182	0/0:16,0:16:14.46:0,14,189	0/0:16,0:16:46.34:0,46,254	0/0:14,0:14:42.13:0,42,570	0/0:16,0:16:48.13:0,48,623	0/0:15,0:15:45.15:0,45,622	0/0:15,0:15:37.49:0,37,200	0/0:17,0:17:21.37:0,21,211	0/0:25,0:25:69.16:0,69,385	0/0:12,0:12:18.24:0,18,177
chr10	80175414	.	CTA	C	886.91	PASS	AB=0.889;AC=12;AF=0.214;AN=56;BaseQRankSum=6.252;DP=573;FS=3.490;HRun=0;HaplotypeScore=163.3502;InbreedingCoeff=-0.2596;MQ=57.20;MQ0=3;MQRankSum=-8.115;QD=4.07;ReadPosRankSum=-3.513;VQSLOD=1.9568;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,2:16:5.91:6,0,655	0/1:8,0:8:9.22:9,0,212	0/0:31,0:23:54.08:0,54,1075	0/0:29,0:22:58.90:0,59,1171	0/0:32,0:32:6.53:0,7,882	0/0:29,0:28:66.18:0,66,883	0/0:19,0:19:57.18:0,57,1118	0/1:17,7:23:99:211,0,903	0/0:16,0:16:48.16:0,48,971	0/1:26,0:26:87.34:87,0,805	0/1:19,0:19:43.69:44,0,390	0/0:17,0:17:51.18:0,51,1035	0/1:14,6:20:99:208,0,611	0/1:11,8:19:99:229,0,555	0/0:19,0:19:18.06:0,18,313	0/0:13,0:13:39.13:0,39,773	0/0:14,0:15:32.82:0,33,481	0/1:15,1:16:3.28:3,0,694	0/0:16,0:16:13.29:0,13,521	0/0:34,0:34:15.99:0,16,530	0/0:9,0:9:24.06:0,24,418	0/0:18,0:18:54.19:0,54,1083	0/0:35,0:34:99:0,105,2088	0/0:23,0:23:69.24:0,69,1383	0/1:19,0:19:19.75:20,0,256	0/1:15,3:18:99:135,0,654	0/1:26,0:26:10.18:10,0,457	0/1:5,2:7:69.19:69,0,197
chr10	80175416	.	A	AAACC	6575.55	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=11.752;DP=586;FS=4.503;HRun=0;HaplotypeScore=171.3328;InbreedingCoeff=0.9302;MQ=55.46;MQ0=3;MQRankSum=-10.100;QD=16.99;ReadPosRankSum=-2.495;VQSLOD=4.1929;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:16.21:157,16,0	1/1:8,0:8:5.93:69,6,0	0/0:29,0:20:15:0,15,153	0/0:28,0:21:33.06:0,33,409	1/1:31,0:31:23.87:316,24,0	1/1:6,23:30:48.16:1128,48,0	0/0:18,0:18:42.11:0,42,618	1/1:31,0:29:47.61:441,48,0	0/0:16,0:16:42.09:0,42,592	1/1:26,0:26:35.40:454,35,0	1/1:19,0:19:24.03:381,24,0	0/0:18,0:18:39.07:0,39,521	1/1:20,0:20:44.47:414,44,0	1/1:23,0:23:56.71:526,57,0	1/1:18,0:18:9.03:156,9,0	0/0:14,0:14:30.04:0,30,416	1/1:16,0:16:9.82:212,10,0	1/1:15,0:15:26.93:278,27,0	1/1:16,0:16:26.94:330,27,0	1/1:35,0:35:23.93:347,24,0	1/1:8,0:8:8.82:54,9,0	0/0:18,0:18:42.08:0,42,569	0/0:34,0:33:78.20:0,78,1138	0/0:24,0:24:62.97:0,63,778	1/1:18,0:18:6.02:100,6,0	1/1:18,0:22:62.74:735,63,0	1/1:24,0:25:12.04:205,12,0	1/1:6,0:8:17.93:273,18,0
chr10	80175435	.	C	CCAACCAACCAAACAAA	20040.24	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=1.578;DP=626;FS=15.214;HRun=0;HaplotypeScore=227.2397;InbreedingCoeff=0.8122;MQ=51.06;MQ0=7;MQRankSum=-9.461;QD=51.25;ReadPosRankSum=-0.314;VQSLOD=2.8117;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:24.96:785,25,0	1/1:1,4:7:6.02:269,6,0	0/0:30,0:16:29.91:0,30,438	0/0:30,0:21:52.06:0,52,1021	1/1:1,22:28:39.13:1557,39,0	0/0:33,0:32:58.53:0,59,824	0/0:17,0:17:51.16:0,51,1746	1/1:38,0:36:96.26:1738,96,0	0/0:18,0:18:54.17:0,54,1614	1/1:2,17:28:58.94:2318,59,0	1/1:1,18:26:33.03:1765,33,0	0/0:16,0:16:48.11:0,48,1402	0/1:19,0:19:47.67:862,0,48	0/1:20,0:20:99:748,0,120	1/1:0,16:24:9.03:690,9,0	0/0:16,0:16:48.14:0,48,1377	1/1:15,0:15:33.11:657,33,0	1/1:15,0:15:45.12:1267,45,0	1/1:1,7:18:51.03:1903,51,0	1/1:2,30:38:33.03:1639,33,0	1/1:11,0:11:24.08:353,24,0	0/0:16,0:16:48.13:0,48,1436	0/0:29,0:29:81.26:0,81,2918	0/0:30,0:30:87.23:0,87,2247	1/1:1,17:26:8.06:477,8,0	1/1:23,0:22:61.92:1569,62,0	1/1:2,20:31:12.04:940,12,0	1/1:8,0:8:18.79:504,19,0
chr10	80175452	.	CAG	C	1503.01	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.512;DP=538;FS=4.163;HRun=0;HaplotypeScore=132.2084;InbreedingCoeff=0.9020;MQ=64.60;MQ0=6;MQRankSum=-6.927;QD=23.48;ReadPosRankSum=3.893;VQSLOD=4.2765;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:16:16.15:0,16,619	0/0:3,0:3:3.01:0,3,36	0/0:21,0:13:35.95:0,36,621	0/0:30,0:24:68.79:0,69,1086	0/0:20,0:20:38.25:0,38,695	0/0:33,0:32:81.24:0,81,1436	0/0:20,0:20:60.21:0,60,1144	0/0:39,0:37:74.70:0,75,1411	0/0:19,0:19:57.18:0,57,1043	0/0:23,0:23:62.78:0,63,1055	0/0:21,0:21:42.13:0,42,677	0/0:12,0:12:36.11:0,36,662	1/1:4,11:16:33:449,33,0	1/1:3,12:15:36.12:532,36,0	0/0:15,0:15:12.04:0,12,183	0/0:16,0:16:48.16:0,48,914	0/0:14,0:14:5.07:0,5,385	0/0:12,0:12:25.02:0,25,424	0/0:20,0:20:54.15:0,54,859	0/0:21,0:21:45.15:0,45,794	0/0:12,0:12:24.08:0,24,462	0/0:13,0:13:36.12:0,36,683	0/0:23,0:23:66.20:0,66,1201	0/0:27,0:27:72.23:0,72,1355	0/0:18,0:18:12.04:0,12,190	1/1:4,3:21:42.67:350,43,0	0/0:26,0:26:36.12:0,36,608	1/1:1,5:11:31.05:331,31,0
chr10	80175455	.	A	AC	511.31	PASS	AB=0.899;AC=10;AF=0.179;AN=56;BaseQRankSum=7.402;DP=531;FS=3.796;HRun=0;HaplotypeScore=120.8329;InbreedingCoeff=0.1726;MQ=66.54;MQ0=6;MQRankSum=-8.302;QD=3.90;ReadPosRankSum=0.302;VQSLOD=3.1955;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:22.88:0,23,497	1/1:2,0:2:0.89:2,1,0	0/0:19,0:13:35.68:0,36,479	0/0:28,0:23:67.04:0,67,848	0/1:20,0:20:38.63:39,0,447	0/0:33,0:32:84.26:0,84,1131	0/0:23,0:23:66.20:0,66,888	0/1:33,6:37:99:137,0,1105	0/0:18,0:18:54.17:0,54,737	0/0:25,0:25:66.09:0,66,802	0/0:23,0:23:47.78:0,48,485	0/0:13,0:13:39.13:0,39,545	0/1:13,0:13:10.72:11,0,47	0/0:12,0:12:9.63:0,10,77	0/0:17,0:17:16.02:0,16,147	0/0:16,0:16:48.15:0,48,656	0/1:10,3:13:67.66:68,0,266	0/1:9,3:12:76.46:76,0,319	0/0:20,0:20:57.14:0,57,713	0/0:22,0:22:47.96:0,48,556	0/0:10,1:11:24.08:0,24,335	0/0:13,0:13:39.11:0,39,514	0/0:22,0:22:66.20:0,66,890	0/0:25,0:25:72.22:0,72,989	0/0:17,0:17:11.99:0,12,130	1/1:18,3:20:13.79:250,14,0	0/0:26,0:26:35.96:0,36,438	0/1:10,1:11:10.99:68,0,11
chr10	80175973	.	GA	G	444.29	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.495;DP=254;FS=7.791;HRun=1;HaplotypeScore=36.8233;InbreedingCoeff=0.7672;MQ=68.42;MQ0=1;MQRankSum=-4.154;QD=11.69;ReadPosRankSum=-2.366;VQSLOD=0.4842;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,2:22:50.76:0,51,412	0/0:2,0:2:5.99:0,6,50	0/0:12,0:9:22.48:0,22,163	0/0:14,0:9:12.80:0,13,129	0/0:7,0:7:12.75:0,13,86	1/1:9,0:10:26.89:218,27,0	0/0:13,1:14:4.82:0,5,137	0/0:11,0:11:26.95:0,27,226	0/0:11,0:11:20.41:0,20,212	0/0:9,0:9:20.26:0,20,165	0/0:5,0:5:11.93:0,12,91	0/0:9,1:10:23.97:0,24,206	1/1:14,0:14:29.65:199,30,0	1/1:3,0:3:2.97:20,3,0	0/0:6,0:6:8.02:0,8,73	0/0:4,0:4:11.84:0,12,80	0/0:12,1:13:23.94:0,24,223	0/0:9,1:9:20.93:0,21,173	0/0:7,0:6:14.97:0,15,126	0/0:3,0:3:8.88:0,9,61	0/0:18,1:18:41.86:0,42,338	0/0:4,1:5:5.97:0,6,46	0/0:7,0:7:9.91:0,10,113	0/0:10,0:10:23.30:0,23,184	0/0:7,0:7:17.92:0,18,144	1/1:10,0:10:23.55:148,24,0	0/0:7,1:8:17.87:0,18,140	1/1:1,0:1:2.88:15,3,0
chr10	80175993	.	A	AGGCCTTCT	4241.36	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=1.834;DP=340;FS=3.162;HRun=0;HaplotypeScore=98.9344;InbreedingCoeff=0.8747;MQ=88.97;MQ0=1;MQRankSum=-9.185;QD=92.20;ReadPosRankSum=0.390;VQSLOD=5.4577;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:63.22:0,63,1709	0/0:1,0:1:3.01:0,3,81	0/0:21,0:20:54.16:0,54,1299	0/0:19,0:18:42.12:0,42,1020	0/0:9,0:9:24.08:0,24,639	0/0:12,0:12:27.09:0,27,729	0/0:11,0:11:24.07:0,24,533	0/0:17,0:17:42.14:0,42,960	0/0:16,0:16:45.14:0,45,1122	0/0:11,0:11:27.09:0,27,719	0/0:6,0:6:18.06:0,18,455	0/0:15,0:15:36.12:0,36,945	1/1:7,11:18:45.15:1794,45,0	1/1:7,3:11:24.08:950,24,0	0/0:6,0:6:18.06:0,18,480	0/0:5,0:5:15.05:0,15,404	0/0:12,0:12:30.06:0,30,722	0/0:15,0:14:39.13:0,39,1025	0/0:10,0:9:24.08:0,24,555	0/0:7,0:7:21.07:0,21,570	0/0:28,0:28:72.22:0,72,1739	0/0:6,0:6:12.04:0,12,297	0/0:11,0:11:30.09:0,30,756	0/0:15,0:15:39.13:0,39,1058	0/0:6,0:6:12.04:0,12,326	1/1:6,9:16:39.12:1368,39,0	0/0:9,0:9:27.02:0,27,525	1/1:0,1:1:3.01:129,3,0
chr10	80176112	.	GTC	G	2576.08	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-3.060;DP=595;FS=1.659;HRun=0;HaplotypeScore=99.0425;InbreedingCoeff=0.9955;MQ=70.04;MQ0=1;MQRankSum=-1.173;QD=40.25;ReadPosRankSum=0.843;VQSLOD=4.9509;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:70,0:70:99:0,211,3879	0/0:9,0:9:27.09:0,27,505	0/0:26,0:24:69.17:0,69,1172	0/0:24,0:24:33.21:0,33,1083	0/0:11,0:11:30.10:0,30,551	0/0:21,0:21:57.15:0,57,974	0/0:22,0:22:66.23:0,66,1216	0/0:18,0:18:54.19:0,54,1012	0/0:23,0:23:66.23:0,66,1215	0/0:21,0:21:57.19:0,57,1039	0/0:9,0:9:27.08:0,27,468	0/0:18,0:18:54.17:0,54,979	1/1:1,22:23:66.22:972,66,0	1/1:1,14:14:42.14:618,42,0	0/0:22,0:22:66.23:0,66,1236	0/0:18,0:17:54.19:0,54,1012	0/0:43,0:43:99:0,129,2405	0/0:30,0:30:90.22:0,90,1615	0/0:19,0:18:51.17:0,51,955	0/0:9,0:9:27.09:0,27,478	0/0:44,0:44:99:0,117,2148	0/0:15,0:15:44.82:0,45,789	0/0:6,0:6:18.06:0,18,337	0/0:19,0:19:57.20:0,57,1068	0/0:17,0:17:48.16:0,48,899	1/1:0,19:19:57.19:837,57,0	0/0:17,0:17:48.16:0,48,898	1/1:0,7:7:21.07:309,21,0
chr10	80176550	.	GAAAAA	G	10599.21	PASS	AB=0.941;AC=37;AF=0.661;AN=56;BaseQRankSum=6.092;DP=520;FS=5.397;HRun=13;HaplotypeScore=119.1284;InbreedingCoeff=0.9089;MQ=63.10;MQ0=2;MQRankSum=-7.838;QD=30.11;ReadPosRankSum=4.393;VQSLOD=3.6028;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:40:63.20:0,63,1491	1/1:3,5:8:14.97:225,15,0	0/0:18,0:15:25.81:0,26,473	0/1:15,1:15:18.73:19,0,251	1/1:5,18:23:19.34:351,19,0	1/1:2,18:20:42.11:719,42,0	0/0:12,0:12:33.11:0,33,888	1/1:6,21:26:20.13:932,20,0	0/0:17,0:19:47.83:0,48,1282	1/1:2,24:26:72.21:1202,72,0	1/1:2,14:16:23.91:363,24,0	0/0:15,0:15:36.12:0,36,969	1/1:1,13:14:33.10:553,33,0	1/1:3,14:17:36.01:512,36,0	1/1:1,28:29:66.04:944,66,0	0/0:18,0:18:45.15:0,45,1172	1/1:2,24:26:57.15:976,57,0	1/1:1,4:5:11.99:174,12,0	1/1:4,12:14:27:422,27,0	1/1:1,18:19:29.94:498,30,0	1/1:8,16:24:26.46:464,26,0	0/0:17,0:18:48.64:0,49,1338	0/0:11,0:11:24.08:0,24,611	0/0:13,0:16:42.14:0,42,1068	1/1:2,14:16:27.01:354,27,0	1/1:3,17:20:48.11:791,48,0	1/1:1,24:25:51.14:842,51,0	1/1:0,5:5:15.05:257,15,0
chr10	80176956	.	AT	A	7235.49	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=10.058;DP=395;FS=15.154;HRun=9;HaplotypeScore=43.0409;InbreedingCoeff=0.8575;MQ=73.47;MQ0=0;MQRankSum=-2.653;QD=22.61;ReadPosRankSum=-0.240;VQSLOD=3.7332;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:16.42:405,16,0	1/1:0,8:8:24.01:220,24,0	0/1:11,0:11:2.50:3,0,73	0/1:5,0:5:4.57:5,0,28	1/1:1,17:18:47.98:431,48,0	1/1:1,14:15:36.02:329,36,0	0/0:12,0:12:33.07:0,33,362	1/1:3,36:39:99:966,108,0	0/0:16,0:16:48.14:0,48,554	1/1:0,16:16:47.95:428,48,0	1/1:1,14:15:39.02:357,39,0	0/0:7,0:7:18.05:0,18,208	1/1:2,6:8:18.01:165,18,0	1/1:0,12:12:33.02:302,33,0	1/1:1,10:11:26.97:239,27,0	0/0:8,0:8:21.05:0,21,232	1/1:3,24:27:63.02:577,63,0	1/1:0,19:19:48.03:439,48,0	1/1:1,16:17:48.01:435,48,0	1/1:1,19:20:53.99:487,54,0	1/1:0,3:3:9:82,9,0	0/0:9,0:9:24.07:0,24,277	0/0:13,0:13:33.09:0,33,371	0/0:10,0:10:27.08:0,27,312	1/1:0,19:19:54.03:494,54,0	1/1:1,13:14:39:351,39,0	1/1:2,17:19:48.02:439,48,0	1/1:2,3:5:9:82,9,0
chr10	80177127	.	ATATTTTTTTT	A	14533.24	PASS	AC=36;AF=0.692;AN=52;BaseQRankSum=4.382;DP=268;FS=4.848;HRun=0;HaplotypeScore=101.1930;InbreedingCoeff=0.8525;MQ=54.30;MQ0=0;MQRankSum=-7.008;QD=61.58;ReadPosRankSum=4.247;VQSLOD=4.5511;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,6:11:21.04:575,21,0	1/1:1,5:6:12.04:366,12,0	0/0:6,0:5:12.04:0,12,281	0/0:6,0:4:11.71:0,12,203	1/1:2,10:12:24.01:533,24,0	1/1:4,15:19:39.12:1163,39,0	0/0:5,0:5:15.04:0,15,536	1/1:9,12:21:33.08:801,33,0	0/0:5,0:5:15.05:0,15,736	1/1:2,13:15:39.13:1103,39,0	1/1:2,17:19:51.13:1396,51,0	0/0:1,0:1:3.01:0,3,78	1/1:0,3:3:9.03:275,9,0	1/1:1,9:10:27.09:820,27,0	1/1:1,3:4:9.03:268,9,0	0/0:5,0:5:15.05:0,15,731	1/1:9,8:17:7.38:801,7,0	1/1:4,5:9:12.03:364,12,0	1/1:9,8:17:42.11:1078,42,0	1/1:2,13:15:39.13:1136,39,0	./.	0/0:1,0:1:3.01:0,3,142	0/0:3,0:3:9.03:0,9,410	./.	1/1:2,17:19:39.13:1163,39,0	1/1:1,15:16:45.15:1320,45,0	1/1:3,16:19:39.12:1164,39,0	1/1:2,2:4:9.01:206,9,0
chr10	80177204	.	C	CTTTA	10674.90	PASS	AC=32;AF=0.615;AN=52;BaseQRankSum=-7.798;DP=328;FS=25.696;HRun=0;HaplotypeScore=62.4657;InbreedingCoeff=0.9323;MQ=61.15;MQ0=0;MQRankSum=-4.121;QD=44.66;ReadPosRankSum=-0.860;VQSLOD=3.0119;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,11:16:27.09:664,27,0	./.	0/0:4,0:4:6.01:0,6,64	0/0:10,0:10:12.04:0,12,183	1/1:5,8:13:27.09:604,27,0	0/0:14,0:14:36.08:0,36,566	0/0:6,0:6:6.02:0,6,100	1/1:10,14:29:57.09:921,57,0	0/0:9,0:9:21.07:0,21,350	1/1:12,10:22:36.12:864,36,0	1/1:8,8:16:24.08:569,24,0	0/0:9,0:9:21.07:0,21,350	1/1:0,2:3:6.02:148,6,0	1/1:5,3:8:12.04:260,12,0	1/1:3,6:10:15.05:369,15,0	0/0:10,0:10:24.08:0,24,400	1/1:4,13:17:42.14:983,42,0	1/1:1,12:14:36.12:885,36,0	1/1:6,14:21:45.13:1003,45,0	1/1:1,7:8:24.08:566,24,0	./.	0/0:5,0:5:15.04:0,15,224	0/0:9,0:9:24.08:0,24,400	0/0:9,0:9:24.08:0,24,400	1/1:3,8:11:24.08:552,24,0	1/1:11,9:20:33.11:789,33,0	1/1:8,12:21:42.14:989,42,0	1/1:3,6:10:21.07:508,21,0
chr10	80177514	.	ATTCT	A	8785.48	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=9.831;DP=513;FS=1.220;HRun=0;HaplotypeScore=131.3757;InbreedingCoeff=0.9892;MQ=58.82;MQ0=2;MQRankSum=-6.972;QD=34.73;ReadPosRankSum=-1.129;VQSLOD=4.6759;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,8:20:40.01:592,40,0	1/1:4,6:10:27.07:417,27,0	0/0:18,0:15:33.11:0,33,725	0/0:20,0:15:35.96:0,36,773	1/1:13,9:22:47.96:685,48,0	0/0:27,0:27:57.16:0,57,1151	0/0:16,0:16:36.11:0,36,774	1/1:8,37:45:89.49:1657,89,0	0/0:24,0:24:69.21:0,69,1574	1/1:13,11:24:57.13:871,57,0	1/1:12,11:24:50.98:764,51,0	0/0:16,0:16:42.14:0,42,943	0/0:22,0:22:36.11:0,36,728	0/0:19,0:19:20.87:0,21,388	1/1:7,5:12:29.93:377,30,0	0/0:14,0:14:36.11:0,36,845	1/1:8,2:10:13.76:229,14,0	1/1:1,7:8:15.05:254,15,0	1/1:9,9:18:33.06:513,33,0	1/1:6,19:25:54.11:845,54,0	1/1:5,4:9:24.01:325,24,0	0/0:19,0:19:51.16:0,51,1206	0/0:21,0:21:60.18:0,60,1407	0/0:12,0:12:36.12:0,36,825	1/1:0,8:8:24.08:420,24,0	0/0:25,0:25:66.22:0,66,1522	1/1:4,14:18:51.11:836,51,0	0/0:6,0:6:12.04:0,12,281
chr10	80177545	.	TTTCCTTCCTTCCTTTCTTTCC	T	14615.98	PASS	AB=0.958;AC=36;AF=0.643;AN=56;BaseQRankSum=13.160;DP=455;FS=5.895;HRun=0;HaplotypeScore=266.3673;InbreedingCoeff=0.8309;MQ=48.25;MQ0=7;MQRankSum=-11.111;QD=51.28;ReadPosRankSum=2.886;VQSLOD=3.6176;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,2:19:19.28:671,19,0	1/1:6,1:7:15.04:431,15,0	0/0:19,0:11:16.43:0,16,391	0/0:23,0:12:22.89:0,23,344	1/1:12,5:17:42.14:1273,42,0	1/1:21,3:24:42.14:1491,42,0	0/0:15,0:15:33.11:0,33,1690	1/1:31,0:31:39.09:759,39,0	0/0:28,0:28:78.25:0,78,4273	1/1:17,2:19:45.15:1611,45,0	1/1:14,4:18:39.13:1312,39,0	0/0:12,0:12:30.10:0,30,1709	1/1:4,13:17:11.66:651,12,0	1/1:3,19:22:12.04:665,12,0	1/1:3,3:6:9.03:444,9,0	0/0:12,0:12:33.11:0,33,1991	0/1:10,1:11:79.14:520,0,79	1/1:9,0:9:5.02:229,5,0	1/1:10,0:9:12.04:366,12,0	1/1:14,4:18:39.12:1299,39,0	1/1:10,0:10:14.84:271,15,0	0/0:21,0:21:45.15:0,45,2920	0/0:23,0:23:60.21:0,60,3412	0/0:17,0:17:33.09:0,33,2710	1/1:7,3:10:18.06:768,18,0	1/1:17,0:16:36.12:1141,36,0	1/1:13,1:14:21.07:571,21,0	0/1:6,0:5:0.36:141,0,0
chr10	80177557	.	C	CTTG	10416.09	PASS	AB=0.672;AC=35;AF=0.625;AN=56;BaseQRankSum=14.465;DP=450;FS=8.070;HRun=0;HaplotypeScore=152.8847;InbreedingCoeff=0.7626;MQ=46.67;MQ0=7;MQRankSum=-13.474;QD=39.45;ReadPosRankSum=0.803;VQSLOD=5.4624;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,7:15:8.38:432,8,0	1/1:5,3:8:24.06:370,24,0	0/0:25,0:13:5:0,5,493	0/0:22,0:10:26.12:0,26,400	1/1:6,10:16:42.11:790,42,0	1/1:7,17:24:53.85:931,54,0	0/0:14,0:14:42.13:0,42,683	1/1:14,10:24:60.16:1162,60,0	0/0:30,0:30:87.28:0,87,1454	1/1:7,14:21:60.14:1155,60,0	1/1:9,9:18:54.17:996,54,0	0/0:16,0:16:39.13:0,39,665	1/1:13,0:13:11.92:195,12,0	1/1:20,0:20:15.05:267,15,0	1/1:4,0:4:9.03:170,9,0	0/0:14,0:14:42.14:0,42,713	0/1:4,7:13:42.19:308,0,42	1/1:3,2:7:7.05:216,7,0	1/1:5,4:8:21:429,21,0	0/1:7,8:15:5.71:700,0,6	1/1:3,7:10:14.76:311,15,0	0/0:18,0:18:48.16:0,48,814	0/0:20,0:20:60.21:0,60,1023	0/0:27,0:27:57.18:0,57,1146	1/1:8,3:12:27.40:400,27,0	1/1:10,8:18:48.07:899,48,0	1/1:6,5:11:33.11:622,33,0	0/1:2,2:4:0.36:63,0,0
chr10	80177564	.	TC	T	2725.77	PASS	AB=0.857;AC=26;AF=0.464;AN=56;BaseQRankSum=13.611;DP=415;FS=13.284;HRun=2;HaplotypeScore=142.1069;InbreedingCoeff=0.1918;MQ=45.05;MQ0=6;MQRankSum=-13.396;QD=11.85;ReadPosRankSum=-0.722;VQSLOD=0.9842;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,1:13:23.94:116,0,24	0/1:4,1:5:8.59:82,0,9	0/0:20,2:10:26.30:0,26,352	0/0:18,0:7:18.04:0,18,217	1/1:15,2:17:21.23:269,21,0	0/1:16,3:19:1.45:268,0,1	0/0:14,0:14:42.13:0,42,608	0/1:10,5:15:52.78:211,0,53	0/0:31,0:31:93.28:0,93,1346	0/1:17,4:20:56.99:214,0,57	1/1:13,3:16:42.67:300,43,0	0/0:17,0:17:48.15:0,48,690	1/1:13,0:13:11.82:113,12,0	1/1:19,0:19:11.78:102,12,0	1/1:3,0:3:8.49:59,8,0	0/0:16,0:16:48.15:0,48,696	0/1:11,2:13:6.54:148,0,7	1/1:5,1:6:12.93:83,13,0	0/1:4,5:7:13.59:119,0,14	0/1:13,1:14:74.37:189,0,74	0/1:7,1:8:11.79:54,0,12	0/0:19,0:19:57.12:0,57,786	0/0:21,0:21:63.20:0,63,919	0/0:26,1:27:66.63:0,67,1141	1/1:7,3:10:22.17:259,22,0	0/1:11,6:16:99:242,0,106	0/1:7,0:7:32.98:72,0,33	0/1:5,0:4:6.23:16,0,6
chr10	80177586	.	TTTCC	T	4336.62	PASS	AB=0.871;AC=29;AF=0.518;AN=56;BaseQRankSum=10.507;DP=433;FS=2.089;HRun=0;HaplotypeScore=148.8991;InbreedingCoeff=0.7395;MQ=46.97;MQ0=9;MQRankSum=-8.193;QD=22.13;ReadPosRankSum=0.321;VQSLOD=4.4280;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,3:13:20.14:253,20,0	1/1:1,3:4:9.03:148,9,0	0/0:24,0:9:12.04:0,12,220	0/0:17,0:7:15.05:0,15,275	1/1:4,8:12:19.90:316,20,0	1/1:11,12:23:46.80:763,47,0	0/0:22,0:22:54.10:0,54,988	1/1:19,1:18:42.05:523,42,0	0/0:27,0:27:69.21:0,69,1454	1/1:12,10:20:29.24:493,29,0	1/1:5,10:15:24.34:334,24,0	0/0:20,0:20:48.15:0,48,1041	0/0:12,0:12:9.04:0,9,34	0/0:19,0:19:11.76:0,12,77	1/1:0,5:5:14.53:171,15,0	0/0:22,0:22:54.17:0,54,1207	1/1:8,3:11:10.51:182,11,0	0/1:6,0:6:10.03:24,0,10	1/1:9,3:8:11.51:167,12,0	0/1:5,5:10:52.83:236,0,53	1/1:3,2:5:11.63:134,12,0	0/0:17,0:17:42.13:0,42,883	0/0:22,0:22:48.14:0,48,968	0/0:28,0:28:66.20:0,66,1445	1/1:6,6:12:17.83:384,18,0	0/1:17,1:18:13.82:14,0,402	1/1:2,6:8:10.33:194,10,0	0/0:7,0:6:14.90:0,15,152
chr10	80178161	.	T	TA	2464.54	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.745;DP=537;FS=3.625;HRun=6;HaplotypeScore=92.2586;InbreedingCoeff=0.9880;MQ=75.18;MQ0=0;MQRankSum=1.096;QD=28.66;ReadPosRankSum=0.117;VQSLOD=3.8926;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.04:0,51,500	0/0:9,0:9:25.46:0,25,155	0/0:14,0:14:18.02:0,18,177	0/0:9,0:9:21.03:0,21,207	0/0:29,0:29:56.25:0,56,348	0/0:27,0:27:66.14:0,66,673	0/0:19,0:19:45.10:0,45,459	0/0:22,0:22:50.68:0,51,274	0/0:17,0:17:48.11:0,48,489	0/0:16,0:16:41.85:0,42,240	0/0:32,0:32:57.48:0,57,365	0/0:19,0:19:54.11:0,54,544	1/1:0,28:28:63.20:793,63,0	1/1:1,17:18:42.13:524,42,0	0/0:15,0:15:32.46:0,32,151	0/0:19,0:19:54.12:0,54,551	0/0:21,0:21:52.59:0,53,304	0/0:6,0:6:12.49:0,12,61	0/0:13,0:13:28.12:0,28,162	0/0:29,0:29:75.15:0,75,340	0/0:15,0:15:33.98:0,34,163	0/0:14,0:14:36.08:0,36,367	0/0:29,0:29:84.17:0,84,848	0/0:14,0:14:42.10:0,42,428	0/0:16,0:16:39.68:0,40,228	1/1:4,23:27:69.21:855,69,0	0/0:29,0:29:64.42:0,64,352	1/1:0,13:13:36.12:453,36,0
chr10	80178168	.	T	TAAA	13832.47	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-15.051;DP=530;FS=2.942;HRun=6;HaplotypeScore=75.3231;InbreedingCoeff=0.9735;MQ=73.24;MQ0=0;MQRankSum=-3.228;QD=54.24;ReadPosRankSum=-1.041;VQSLOD=4.4952;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.17:0,51,803	1/1:2,7:9:27.09:527,27,0	0/0:10,0:10:24.08:0,24,372	0/0:9,0:9:20.95:0,21,333	1/1:3,24:27:72.12:1416,72,0	0/0:24,0:24:69.22:0,69,1078	0/0:17,0:17:45.14:0,45,695	1/1:3,20:24:66.18:1270,66,0	0/0:16,0:16:45.15:0,45,719	1/1:3,15:18:48.15:1015,48,0	1/1:3,27:31:81.19:1707,81,0	0/0:18,0:18:51.16:0,51,792	0/0:29,0:29:62.88:0,63,676	0/0:19,0:19:48.09:0,48,505	1/1:0,14:14:36.12:815,36,0	0/0:19,0:19:54.17:0,54,840	1/1:4,18:22:51.18:1136,51,0	1/1:1,6:7:2.67:259,3,0	1/1:1,9:10:27.09:577,27,0	1/1:0,31:32:93.25:1921,93,0	1/1:1,12:13:36.12:816,36,0	0/0:15,0:15:39.01:0,39,542	0/0:29,0:29:87.28:0,87,1366	0/0:15,0:15:45.15:0,45,714	1/1:4,12:16:39.13:855,39,0	0/0:24,0:24:72.17:0,72,808	1/1:5,24:32:69.24:1518,69,0	0/0:13,0:13:36.05:0,36,351
chr10	80178275	.	A	AGGG	1130.73	PASS	AB=0.591;AC=7;AF=0.125;AN=56;BaseQRankSum=8.038;DP=524;FS=11.271;HRun=1;HaplotypeScore=135.0340;InbreedingCoeff=0.6667;MQ=47.43;MQ0=17;MQRankSum=-5.215;QD=32.31;ReadPosRankSum=2.943;VQSLOD=0.8774;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:35.69:0,36,443	0/0:14,0:11:20.51:0,21,198	0/0:17,0:5:12.04:0,12,205	0/0:20,0:7:15.05:0,15,250	0/0:24,0:24:24.77:0,25,262	0/0:32,0:32:72.14:0,72,988	0/0:14,0:14:39.58:0,40,628	0/0:43,0:43:99:0,113,1425	0/0:19,0:19:51.17:0,51,878	0/0:21,0:21:60.98:0,61,738	0/0:19,0:19:20.48:0,20,170	0/0:18,0:18:48.16:0,48,841	1/1:2,5:7:15.05:336,15,0	1/1:3,5:7:15.05:308,15,0	0/0:11,0:11:1.43:0,1,107	0/0:20,0:20:59.96:0,60,932	0/0:25,0:25:47.87:0,48,588	0/0:8,0:8:5.27:0,5,283	0/0:18,0:16:43.61:0,44,544	0/0:28,0:26:35.87:0,36,413	0/0:10,0:9:0.46:0,0,1	0/0:31,0:31:78.03:0,78,1230	0/0:22,0:22:60.14:0,60,969	0/0:25,0:25:60.21:0,60,1051	0/0:18,0:18:17.49:0,17,208	0/1:4,9:13:97.40:544,0,97	0/0:11,0:10:24:0,24,321	1/1:2,4:5:5.61:78,6,0
chr10	80178328	.	GGA	G	1779.01	PASS	AB=0.545;AC=19;AF=0.413;AN=46;BaseQRankSum=7.301;DP=402;FS=11.645;HRun=0;HaplotypeScore=107.1467;InbreedingCoeff=0.8572;MQ=68.99;MQ0=19;MQRankSum=-3.603;QD=23.10;ReadPosRankSum=-0.733;VQSLOD=3.9039;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,1:20:42.15:0,42,748	./.	0/0:33,0:14:17.80:0,18,494	0/0:60,2:31:41.49:0,41,550	./.	0/0:32,0:32:32.25:0,32,797	0/0:17,0:17:38.37:0,38,908	./.	0/0:10,0:10:26.92:0,27,480	1/1:2,5:7:17.11:252,17,0	0/0:0,9:9:1.36:0,1,3	0/0:16,0:16:10.84:0,11,602	1/1:9,5:14:36.10:483,36,0	1/1:2,6:8:5.93:82,6,0	./.	0/0:20,0:19:36.47:0,36,946	1/1:3,4:7:20.38:217,20,0	1/1:3,3:6:12:126,12,0	1/1:5,3:5:9.03:124,9,0	0/1:1,5:5:0:0,0,0	0/0:1,5:6:1.72:0,2,4	0/0:21,0:21:42.49:0,42,770	0/0:25,0:25:51.72:0,52,1012	0/0:28,0:28:59.58:0,60,1102	./.	1/1:4,6:9:24.08:352,24,0	1/1:0,4:4:9.03:117,9,0	1/1:7,0:7:18.01:205,18,0
chr10	80178346	.	GATGA	G	2006.62	PASS	AB=0.882;AC=18;AF=0.375;AN=48;BaseQRankSum=7.579;DP=502;FS=4.528;HRun=0;HaplotypeScore=137.0386;InbreedingCoeff=0.8046;MQ=73.68;MQ0=15;MQRankSum=-7.434;QD=18.24;ReadPosRankSum=-2.472;VQSLOD=2.9083;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:54.19:0,54,1387	1/1:3,3:4:3.01:54,3,0	0/0:49,0:27:45.17:0,45,1566	0/0:84,0:44:29.63:0,30,1167	./.	0/0:34,0:34:63.18:0,63,1444	0/0:19,0:19:54.18:0,54,1404	1/1:3,10:13:39.08:668,39,0	0/0:12,0:12:33.11:0,33,882	1/1:1,4:5:12.04:230,12,0	./.	0/0:15,0:15:42.14:0,42,1026	0/0:20,0:20:45.41:0,45,1119	0/0:10,0:10:24.01:0,24,526	./.	0/0:18,0:17:48.16:0,48,1319	1/1:2,11:14:18.06:303,18,0	1/1:5,2:7:14.70:183,15,0	1/1:3,4:7:18.06:323,18,0	1/1:6,14:19:3.01:52,3,0	./.	0/0:13,0:13:36.12:0,36,951	0/0:21,0:21:51.17:0,51,1396	0/0:24,0:24:55.26:0,55,1522	0/1:9,4:13:0:0,0,0	0/1:15,0:14:17.24:17,0,873	1/1:2,8:10:21.54:356,22,0	0/0:8,0:8:13.80:0,14,539
chr10	80178347	.	AT	A	559.59	PASS	AB=0.626;AC=18;AF=0.360;AN=50;BaseQRankSum=8.496;DP=478;FS=4.726;HRun=1;HaplotypeScore=115.5426;InbreedingCoeff=0.8661;MQ=75.29;MQ0=15;MQRankSum=-6.812;QD=5.54;ReadPosRankSum=-2.390;VQSLOD=-0.4117;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,1:23:57.17:0,57,853	1/1:3,1:4:2.92:17,3,0	0/0:49,0:27:70.04:0,70,1062	0/0:84,0:44:48.26:0,48,841	0/1:7,8:15:0:0,0,0	0/0:34,0:34:60.20:0,60,894	0/0:20,0:20:57.13:0,57,855	1/1:10,2:13:38.30:243,38,0	0/0:12,0:12:36.11:0,36,550	1/1:4,0:4:11.85:78,12,0	./.	0/0:15,0:15:42.13:0,42,637	0/0:18,0:18:48.15:0,48,736	0/0:9,0:9:21.07:0,21,334	./.	0/0:16,0:15:48.16:0,48,766	1/1:12,1:13:16.73:90,17,0	1/1:3,4:7:13.84:69,14,0	1/1:5,1:6:17.75:116,18,0	1/1:14,4:18:2.84:14,3,0	./.	0/0:12,0:12:36.11:0,36,552	0/0:19,0:19:51.17:0,51,815	0/0:23,0:23:37.58:0,38,864	0/1:4,8:12:0:0,0,0	0/0:14,1:14:20.77:0,21,546	1/1:8,1:9:20.13:111,20,0	0/0:7,0:8:20.98:0,21,331
chr10	80178350	.	A	AG	486.60	PASS	AB=0.802;AC=19;AF=0.365;AN=52;BaseQRankSum=8.880;DP=486;FS=5.834;HRun=1;HaplotypeScore=117.9677;InbreedingCoeff=0.8413;MQ=75.50;MQ0=14;MQRankSum=-7.785;QD=4.02;ReadPosRankSum=-2.023;VQSLOD=-0.3950;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:54.18:0,54,755	1/1:4,0:4:2.80:13,3,0	0/0:48,0:28:75.81:0,76,934	0/0:79,0:44:40.91:0,41,693	0/1:14,3:17:0.01:0,0,0	0/0:34,0:34:51.14:0,51,690	0/0:21,0:21:60.19:0,60,822	1/1:14,1:15:43.49:254,43,0	0/0:13,0:13:39.10:0,39,511	1/1:4,0:4:11.56:62,12,0	0/1:7,4:11:0:0,0,0	0/0:14,0:14:42.14:0,42,576	0/0:19,0:19:54.09:0,54,711	0/0:9,0:9:24.04:0,24,314	./.	0/0:16,0:15:48.16:0,48,670	1/1:13,1:14:16.62:77,17,0	1/1:4,3:7:11.97:65,12,0	1/1:7,0:7:17.39:95,17,0	1/1:17,1:18:2.54:10,3,0	./.	0/0:12,0:12:33.11:0,33,461	0/0:18,0:18:51.17:0,51,713	0/0:23,0:23:62.94:0,63,849	0/1:11,3:14:0:0,0,0	0/0:16,0:15:23.97:0,24,489	1/1:9,1:10:18.95:87,19,0	0/0:8,0:8:20.86:0,21,294
chr10	80178352	.	GAC	G	620.55	PASS	AB=0.975;AC=14;AF=0.269;AN=52;BaseQRankSum=9.495;DP=500;FS=2.720;HRun=0;HaplotypeScore=125.6793;InbreedingCoeff=0.5192;MQ=75.68;MQ0=12;MQRankSum=-5.794;QD=3.72;ReadPosRankSum=-3.668;VQSLOD=1.9327;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:60.21:0,60,1135	1/1:4,0:4:2.90:16,3,0	0/0:48,0:31:37.40:0,37,1030	0/1:75,2:44:13.04:13,0,808	0/0:16,1:17:2.98:0,3,21	0/0:34,0:34:54.19:0,54,1029	0/0:21,0:21:60.19:0,60,1124	0/1:17,1:18:5.63:248,0,6	0/0:12,0:12:36.12:0,36,693	1/1:5,0:5:14.76:104,15,0	0/0:11,0:11:2.96:0,3,19	0/0:14,0:14:39.13:0,39,722	0/0:20,0:20:54.19:0,54,1027	0/0:9,0:9:24.08:0,24,461	./.	0/0:17,0:16:51.17:0,51,925	0/1:15,0:15:3.05:74,0,3	0/1:7,0:7:8.22:28,0,8	1/1:7,1:8:18.53:108,19,0	1/1:21,0:21:12.34:87,12,0	./.	0/0:12,0:12:33.11:0,33,626	0/0:18,0:18:54.19:0,54,1042	0/0:23,0:23:63.07:0,63,1163	0/0:14,0:14:2.89:0,3,20	0/0:16,0:15:25.40:0,25,700	1/1:10,0:10:2.38:103,2,0	0/0:11,0:11:17.72:0,18,456
chr10	80178934	.	C	CTG	5447.20	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-12.802;DP=628;FS=0.393;HRun=0;HaplotypeScore=71.8176;InbreedingCoeff=0.9512;MQ=85.41;MQ0=2;MQRankSum=-1.668;QD=46.56;ReadPosRankSum=1.917;VQSLOD=5.9969;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,37:38:99:1890,105,0	0/0:13,0:13:30.10:0,30,420	0/0:20,0:20:48.11:0,48,624	0/0:20,0:20:54.65:0,55,748	0/0:30,0:30:84.28:0,84,1176	0/0:19,0:19:48.14:0,48,654	0/0:21,0:21:63.20:0,63,865	0/0:29,0:29:69.23:0,69,966	0/0:21,0:21:54.16:0,54,724	0/0:23,0:23:66.22:0,66,925	0/0:20,0:20:51.16:0,51,692	0/0:19,0:19:54.18:0,54,756	1/1:3,28:31:84.22:1470,84,0	1/1:1,17:18:51.17:918,51,0	0/0:25,0:25:63.18:0,63,848	0/0:25,0:25:66.19:0,66,890	0/0:15,0:15:42.14:0,42,586	0/0:2,0:2:6.02:0,6,84	0/0:25,0:25:69.23:0,69,965	0/0:30,0:30:90.29:0,90,1243	0/0:22,0:22:63.20:0,63,864	0/0:23,0:23:69.23:0,69,965	0/0:29,0:29:87.28:0,87,1199	0/0:27,0:27:75.19:0,75,1010	0/0:24,0:24:66.22:0,66,924	1/1:4,16:19:6.12:737,6,0	0/0:29,0:29:81.20:0,81,1094	1/1:0,8:9:24.08:432,24,0
chr10	80179142	.	CA	C	13224.58	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=12.352;DP=581;FS=0.000;HRun=4;HaplotypeScore=58.4789;InbreedingCoeff=0.9689;MQ=72.67;MQ0=0;MQRankSum=-3.032;QD=32.73;ReadPosRankSum=2.345;VQSLOD=5.3281;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:63.19:756,63,0	1/1:0,13:13:39.12:468,39,0	0/0:17,0:17:46.38:0,46,600	0/0:9,0:9:24.13:0,24,283	1/1:0,32:32:96.29:1152,96,0	0/0:21,0:21:54.16:0,54,737	0/0:12,0:12:36.12:0,36,503	1/1:1,19:20:57.14:660,57,0	0/0:19,0:19:54.18:0,54,756	1/1:2,26:28:78.24:936,78,0	1/1:2,42:44:99:1404,117,0	0/0:18,0:18:54.18:0,54,756	1/1:1,20:21:57.17:684,57,0	1/1:1,15:16:45.13:529,45,0	1/1:1,14:15:3.13:462,3,0	0/0:18,0:17:54.18:0,54,756	1/1:2,22:24:63.19:756,63,0	1/1:0,8:8:24.07:288,24,0	1/1:1,23:24:30.50:786,31,0	1/1:2,37:39:99:1260,105,0	1/1:0,7:7:21.06:252,21,0	0/0:21,0:21:63.21:0,63,881	0/0:28,0:28:78.24:0,78,1060	0/0:14,0:14:36.12:0,36,502	1/1:0,27:27:72.22:864,72,0	1/1:5,21:26:72.21:852,72,0	1/1:0,31:31:81.25:972,81,0	1/1:0,5:5:12.04:144,12,0
chr10	80179207	.	A	AT	1683.82	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=1.084;DP=600;FS=1.120;HRun=8;HaplotypeScore=75.1276;InbreedingCoeff=0.9583;MQ=69.93;MQ0=0;MQRankSum=-1.959;QD=24.76;ReadPosRankSum=0.199;VQSLOD=4.2448;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:62.94:0,63,557	0/0:7,0:7:15:0,15,137	0/0:10,0:9:17.94:0,18,155	0/0:10,0:10:24:0,24,220	0/0:31,0:31:78.02:0,78,709	0/0:22,0:21:63.03:0,63,576	0/0:5,0:5:14.99:0,15,132	0/0:30,0:30:68.99:0,69,621	0/0:21,0:21:57.03:0,57,521	0/0:25,0:25:69.01:0,69,621	0/0:35,0:35:90.02:0,90,823	0/0:17,0:17:45:0,45,407	1/1:3,10:15:39.11:448,39,0	1/1:4,19:23:57.17:656,57,0	0/0:21,0:21:60.03:0,60,548	0/0:24,0:24:60:0,60,545	0/0:31,0:30:84.04:0,84,769	0/0:13,0:13:36.02:0,36,329	0/0:22,0:22:53.94:0,54,483	0/0:39,0:39:99:0,102,932	0/0:12,0:12:36:0,36,323	0/0:25,0:25:66.02:0,66,601	0/0:29,0:29:81.03:0,81,736	0/0:18,0:18:53.99:0,54,482	0/0:26,0:26:60.02:0,60,549	1/1:7,20:27:35.72:665,36,0	0/0:35,0:35:83.99:0,84,752	1/1:1,2:3:6.02:69,6,0
chr10	80180485	.	CACACATATATAT	C	2402.29	PASS	AB=0.993;AC=20;AF=0.435;AN=46;BaseQRankSum=2.737;DP=275;FS=16.200;HRun=0;HaplotypeScore=117.3204;InbreedingCoeff=-0.0551;MQ=37.21;MQ0=9;MQRankSum=-1.649;QD=11.23;ReadPosRankSum=1.026;VQSLOD=1.1671;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:7:9.03:0,9,262	1/1:7,0:7:2.52:50,3,0	./.	./.	1/1:24,0:24:7.01:104,7,0	0/1:13,0:12:47.19:65,0,47	0/0:7,0:6:12.04:0,12,369	0/1:31,0:26:31.02:623,0,31	0/0:5,0:5:9.50:0,10,249	0/1:12,0:11:23.57:254,0,24	1/1:10,0:8:2.41:16,2,0	./.	./.	0/0:2,0:2:3.01:0,3,50	0/0:7,1:8:5.28:0,5,31	0/0:4,0:3:6.02:0,6,330	0/1:17,0:17:76.98:220,0,77	0/1:9,0:9:6.57:135,0,7	1/1:3,0:3:5.02:60,5,0	0/1:19,0:19:7.35:153,0,7	0/1:7,0:6:14.06:34,0,14	./.	0/0:7,0:7:12.50:0,12,313	0/0:6,0:6:6.02:0,6,114	0/1:13,1:14:14.29:71,0,14	0/1:17,0:16:99:157,0,471	1/1:21,2:23:27.72:555,28,0	0/1:7,0:5:51.66:52,0,230
chr10	80180487	.	CACATATATAT	C	3201.02	PASS	AB=0.974;AC=30;AF=0.652;AN=46;BaseQRankSum=-0.664;DP=263;FS=14.421;HRun=0;HaplotypeScore=108.7196;InbreedingCoeff=0.2114;MQ=36.96;MQ0=9;MQRankSum=-1.253;QD=14.16;ReadPosRankSum=-1.866;VQSLOD=1.0668;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:8:12.01:0,12,284	1/1:5,1:6:2.57:70,3,0	./.	./.	1/1:18,5:24:10.67:151,11,0	0/1:12,0:11:21.45:21,0,48	0/0:7,0:6:12.01:0,12,292	1/1:28,0:23:38.76:754,39,0	0/1:5,0:5:12.34:12,0,178	1/1:11,0:11:17.52:360,18,0	1/1:9,1:8:2.55:23,3,0	./.	./.	0/0:2,0:2:3:0,3,25	1/1:6,1:7:5.95:43,6,0	0/0:3,0:2:6.02:0,6,272	0/1:13,3:16:55.95:309,0,56	1/1:8,1:9:14.40:143,14,0	1/1:2,1:3:5.78:120,6,0	1/1:18,1:19:17.29:200,17,0	1/1:6,1:6:6.02:111,6,0	./.	0/1:7,0:7:12.35:12,0,199	0/0:6,0:6:5.99:0,6,48	1/1:10,3:13:5.08:101,5,0	0/1:17,0:16:99:178,0,254	1/1:21,1:23:38.99:696,39,0	0/1:7,0:5:51.75:52,0,166
chr10	80180489	.	CATATATAT	C	2365.13	PASS	AB=0.803;AC=23;AF=0.575;AN=40;BaseQRankSum=0.505;DP=252;FS=1.092;HRun=0;HaplotypeScore=108.3461;InbreedingCoeff=0.2763;MQ=36.60;MQ0=9;MQRankSum=-1.414;QD=12.38;ReadPosRankSum=-1.329;VQSLOD=1.9836;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:8:6.02:0,6,202	1/1:1,5:6:2.59:70,3,0	./.	./.	1/1:15,9:23:4.56:92,5,0	0/0:12,0:11:4.59:0,5,63	0/0:6,0:5:6.02:0,6,204	1/1:19,7:23:26.95:662,27,0	0/0:5,0:5:6.02:0,6,159	1/1:8,1:11:11.99:231,12,0	0/1:6,4:8:0:0,0,0	./.	./.	./.	./.	0/0:3,0:2:6.02:0,6,212	0/1:12,3:16:58.73:255,0,59	0/1:8,0:9:1.86:67,0,2	1/1:3,0:3:2.80:65,3,0	1/1:11,6:18:8.04:53,8,0	1/1:6,1:6:6.02:100,6,0	./.	0/0:6,0:6:3.01:0,3,126	./.	1/1:8,4:13:2.27:76,2,0	0/1:10,0:15:88.73:259,0,89	1/1:14,5:22:26.36:495,26,0	0/1:6,0:5:73.47:73,0,80
chr10	80180529	.	CACATATATATAT	C	2835.21	PASS	AB=0.985;AC=15;AF=0.313;AN=48;BaseQRankSum=1.914;DP=287;FS=1.508;HRun=0;HaplotypeScore=138.4913;InbreedingCoeff=-0.1777;MQ=42.45;MQ0=6;MQRankSum=-3.161;QD=14.25;ReadPosRankSum=0.806;VQSLOD=2.6166;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:6.02:0,6,171	1/1:7,1:8:6.74:161,7,0	0/0:8,0:2:3.62:0,4,11	0/1:9,0:2:12.66:13,0,15	0/0:27,0:27:2.95:0,3,25	1/1:12,0:12:0.47:1,0,0	0/0:1,0:1:3.01:0,3,90	0/1:39,1:36:99:729,0,280	0/0:2,0:2:6.01:0,6,95	0/1:11,0:10:27.58:296,0,28	0/0:9,0:8:0.94:0,1,1	0/0:2,0:2:2.98:0,3,188	./.	./.	./.	0/0:2,0:2:5.99:0,6,49	0/1:18,0:18:99:313,0,136	0/1:13,1:14:9.96:196,0,10	0/1:12,1:12:88.60:305,0,89	0/1:14,0:14:0:0,0,1	0/1:11,0:11:38.95:39,0,51	./.	0/0:2,0:2:6.01:0,6,177	0/0:2,0:2:3.01:0,3,188	0/0:13,0:13:3.47:0,3,27	0/1:19,0:19:49.97:303,0,50	0/1:26,0:25:0.71:536,0,1	0/1:4,0:4:25.42:70,0,25
chr10	80180531	.	CATATATATAT	C	4619.48	PASS	AB=0.665;AC=23;AF=0.479;AN=48;BaseQRankSum=0.184;DP=284;FS=0.000;HRun=0;HaplotypeScore=119.5380;InbreedingCoeff=0.4729;MQ=45.63;MQ0=6;MQRankSum=-3.129;QD=21.39;ReadPosRankSum=1.093;VQSLOD=3.8729;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:6.01:0,6,120	1/1:2,6:8:8.91:207,9,0	0/0:8,0:3:6.52:0,7,22	0/0:10,0:2:2.98:0,3,21	0/1:13,13:26:0.05:0,0,0	1/1:1,2:11:0.47:1,0,0	0/0:1,0:1:3.01:0,3,40	1/1:18,23:37:67.79:1342,68,0	0/0:2,0:2:3.01:0,3,48	1/1:5,6:10:18.04:434,18,0	0/0:4,5:8:0.47:0,0,1	0/0:2,0:2:2.99:0,3,152	./.	./.	./.	./.	0/1:11,6:18:68.12:401,0,68	1/1:6,8:14:6.02:167,6,0	1/1:5,8:12:26.09:492,26,0	0/1:5,7:14:0.02:0,0,1	1/1:6,5:11:5.89:63,6,0	0/0:1,0:1:3.01:0,3,118	0/0:2,0:2:3.01:0,3,119	0/0:2,0:2:3.01:0,3,152	0/0:5,5:11:0.46:0,0,1	1/1:7,1:18:30.04:524,30,0	1/1:6,20:27:32.78:907,33,0	1/1:3,0:4:3.01:80,3,0
chr10	80181043	.	TTCCAGGCCCCCTA	T	1036.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.129;DP=504;FS=5.060;HRun=0;HaplotypeScore=180.4056;InbreedingCoeff=0.9912;MQ=73.56;MQ0=0;MQRankSum=-5.282;QD=57.56;ReadPosRankSum=1.262;VQSLOD=2.8571;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:27.09:1130,27,0	0/0:8,0:8:24.08:0,24,1420	0/0:25,0:24:67.22:0,67,3453	0/0:14,0:11:30.10:0,30,1557	0/0:23,0:23:69.24:0,69,4581	0/0:23,0:23:69.24:0,69,4385	0/0:7,0:7:21.07:0,21,1403	0/0:39,0:39:99:0,117,7277	0/0:15,0:15:45.15:0,45,2921	0/0:20,0:20:60.21:0,60,3760	0/0:22,0:22:66.23:0,66,4251	0/0:11,0:11:33.11:0,33,2189	0/0:15,0:15:45.15:0,45,2907	0/0:11,0:11:33.11:0,33,1926	0/0:11,0:11:33.11:0,33,2112	0/0:15,0:15:45.15:0,45,2886	0/0:20,0:20:60.21:0,60,3832	0/0:23,0:23:66.23:0,66,4397	0/0:26,0:26:78.27:0,78,4441	0/0:21,0:21:57.20:0,57,3328	0/0:12,0:12:36.12:0,36,2035	0/0:17,0:17:51.18:0,51,3231	0/0:26,0:26:78.27:0,78,4835	0/0:11,0:11:33.11:0,33,1971	0/0:12,0:12:36.12:0,36,2433	0/0:17,0:17:51.18:0,51,3367	0/0:20,0:20:60.21:0,60,3770	0/0:21,0:21:63.22:0,63,4240
chr10	80181915	.	TTGGTCTC	T	9862.05	PASS	AB=0.517;AC=25;AF=0.446;AN=56;BaseQRankSum=12.338;DP=418;FS=17.825;HRun=0;HaplotypeScore=105.1200;InbreedingCoeff=0.9194;MQ=65.70;MQ0=0;MQRankSum=-12.563;QD=50.06;ReadPosRankSum=-2.076;VQSLOD=2.6178;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,3942	1/1:0,6:6:18.06:452,18,0	0/0:21,0:19:48.62:0,49,1744	0/0:38,0:36:78.82:0,79,3033	1/1:3,13:16:30.06:718,30,0	0/0:13,0:13:39.13:0,39,1560	0/0:9,0:9:27.09:0,27,1080	1/1:2,23:25:69.23:1678,69,0	0/0:11,0:11:33.11:0,33,1277	1/1:1,15:16:45.14:1107,45,0	1/1:0,15:15:33.11:774,33,0	0/0:13,0:13:39.13:0,39,1418	0/0:8,0:8:24.08:0,24,893	0/0:11,0:11:30.10:0,30,1149	1/1:0,11:11:30.10:778,30,0	0/0:11,0:11:33.11:0,33,1263	1/1:0,16:16:21.07:545,21,0	0/1:1,14:15:36.62:507,0,37	1/1:3,10:13:30.07:708,30,0	1/1:1,17:18:39.09:909,39,0	1/1:5,19:24:20.92:456,21,0	0/0:9,0:9:27.09:0,27,1079	0/0:9,0:9:27.09:0,27,1025	0/0:14,0:14:42.13:0,42,1583	1/1:2,13:15:36.12:919,36,0	0/0:10,0:10:30.09:0,30,1059	1/1:2,5:7:12.04:311,12,0	0/0:7,0:7:21.07:0,21,794
chr10	80184451	.	TAC	T	454.76	PASS	AC=20;AF=0.625;AN=32;BaseQRankSum=-2.052;DP=63;FS=0.000;HRun=0;HaplotypeScore=12.8977;InbreedingCoeff=0.5099;MQ=101.53;MQ0=2;MQRankSum=-3.897;QD=16.84;ReadPosRankSum=-0.143;VQSLOD=2.8461;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,0:1:3:25,3,0	0/0:3,0:3:5.97:0,6,48	0/0:14,0:6:8.08:0,8,81	1/1:1,0:1:2.99:24,3,0	./.	./.	1/1:10,0:10:26.97:233,27,0	0/0:1,0:1:2.99:0,3,24	1/1:1,0:1:3:28,3,0	1/1:2,0:2:5.99:50,6,0	0/0:1,0:1:2.99:0,3,23	./.	./.	1/1:2,0:2:5.99:50,6,0	./.	1/1:5,0:5:5.91:38,6,0	./.	1/1:3,0:3:9:81,9,0	./.	./.	0/0:1,0:1:2.99:0,3,24	0/0:4,0:4:11.97:0,12,96	./.	1/1:1,0:1:3:25,3,0	./.	1/1:1,0:1:2.99:24,3,0	./.
chr10	80185171	.	CA	C	1577.86	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.890;DP=481;FS=1.772;HRun=8;HaplotypeScore=46.2913;InbreedingCoeff=0.9803;MQ=72.72;MQ0=0;MQRankSum=-0.134;QD=23.91;ReadPosRankSum=2.249;VQSLOD=4.1645;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:57.09:550,57,0	0/0:7,0:7:21.06:0,21,254	0/0:7,0:7:12.04:0,12,145	0/0:8,0:8:12.03:0,12,135	0/0:23,0:23:63.18:0,63,751	1/1:0,10:10:30.05:290,30,0	0/0:13,0:13:36.09:0,36,421	0/0:27,0:27:72.22:0,72,869	0/0:12,0:12:33.10:0,33,399	0/0:22,0:22:57.16:0,57,672	0/0:34,0:34:96.29:0,96,1155	0/0:17,0:17:36.11:0,36,435	1/1:1,17:18:48.08:464,48,0	1/1:1,16:17:45.07:435,45,0	0/0:18,0:18:51.12:0,51,601	0/0:15,0:15:36.11:0,36,435	0/0:23,0:23:54.16:0,54,642	0/0:9,0:9:21.06:0,21,254	0/0:21,0:21:54.16:0,54,644	0/0:23,0:23:66.20:0,66,797	0/0:15,0:15:42.13:0,42,507	0/0:16,0:16:39.12:0,39,471	0/0:19,0:19:48.11:0,48,541	0/0:12,0:12:30.08:0,30,352	0/0:14,0:14:39.12:0,39,471	0/0:21,0:22:63.15:0,63,741	0/0:26,0:26:72.16:0,72,821	0/0:12,0:12:36.11:0,36,435
chr10	80185317	.	GT	G	4032.93	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=0.986;DP=415;FS=2.767;HRun=10;HaplotypeScore=67.9925;InbreedingCoeff=0.8391;MQ=64.57;MQ0=11;MQRankSum=1.818;QD=17.02;ReadPosRankSum=3.891;VQSLOD=4.4126;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:33.05:0,33,351	1/1:3,6:9:26.89:214,27,0	0/0:29,0:13:1.27:0,1,167	0/0:31,0:9:11.25:0,11,83	1/1:13,9:22:45.04:400,45,0	0/0:15,0:15:42.09:0,42,444	0/1:11,0:11:7.04:7,0,140	1/1:13,13:22:9.29:339,9,0	0/0:10,0:10:20.26:0,20,198	1/1:10,2:12:23.87:206,24,0	1/1:12,5:16:34.52:338,35,0	0/0:11,0:11:27.28:0,27,264	0/0:2,0:10:8.48:0,8,35	0/0:6,0:13:27.65:0,28,130	1/1:13,6:19:44.93:390,45,0	0/0:3,0:2:6.02:0,6,65	1/1:14,6:20:46.65:397,47,0	1/1:10,0:9:14.91:114,15,0	1/1:8,13:21:29.72:283,30,0	1/1:0,13:13:38.99:337,39,0	1/1:7,1:8:16.48:152,16,0	0/0:14,0:14:30.55:0,31,332	0/0:16,0:16:36.05:0,36,381	0/0:3,0:5:9.02:0,9,94	1/1:7,9:16:41.91:349,42,0	1/1:15,2:17:32.88:318,33,0	1/1:8,3:10:14.91:121,15,0	1/1:5,0:5:5.02:67,5,0
chr10	80185331	.	T	TTC	2911.90	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=6.457;DP=442;FS=12.172;HRun=0;HaplotypeScore=74.3935;InbreedingCoeff=0.4224;MQ=53.70;MQ0=28;MQRankSum=2.473;QD=9.19;ReadPosRankSum=2.690;VQSLOD=2.4348;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:29.35:121,29,0	1/1:7,1:8:22.28:164,22,0	0/1:26,0:8:2.99:3,0,86	0/0:33,0:8:5.42:0,5,47	1/1:23,0:23:18.42:278,18,0	0/1:13,0:13:17.44:112,0,17	0/0:13,0:12:29.91:0,30,263	1/1:28,2:26:31.66:423,32,0	0/0:11,0:11:25.48:0,25,223	0/1:12,0:12:17.87:117,0,18	1/1:19,0:17:26.34:257,26,0	0/0:13,0:12:32.23:0,32,250	1/1:5,0:5:11.51:74,12,0	1/1:14,0:12:27.58:132,28,0	1/1:20,0:19:31.91:266,32,0	0/0:4,0:3:8:0,8,61	1/1:21,0:21:46.24:286,46,0	0/1:13,0:12:20.11:45,0,20	0/1:19,0:18:12.18:108,0,12	0/1:16,0:15:17.46:103,0,17	1/1:10,0:9:9.25:67,9,0	0/0:14,0:14:35.93:0,36,322	0/0:16,0:16:38.65:0,39,333	0/0:7,0:5:8.96:0,9,72	1/1:14,1:15:35.03:263,35,0	0/1:21,0:20:11.04:257,0,11	0/0:14,0:11:6.51:0,7,44	0/1:12,0:7:3.29:35,0,3
chr10	80185332	.	T	TC	4946.83	PASS	AB=0.938;AC=36;AF=0.643;AN=56;BaseQRankSum=7.222;DP=447;FS=10.200;HRun=0;HaplotypeScore=62.4705;InbreedingCoeff=0.6654;MQ=53.45;MQ0=31;MQRankSum=3.155;QD=14.72;ReadPosRankSum=3.887;VQSLOD=5.7361;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:33.06:332,33,0	1/1:6,2:8:23.73:176,24,0	0/1:26,0:8:2.95:3,0,78	0/0:34,0:8:5.22:0,5,47	1/1:22,1:23:37.83:408,38,0	1/1:13,0:13:2.16:135,2,0	0/0:13,0:12:29.93:0,30,268	1/1:21,9:26:27.65:493,28,0	0/0:10,0:10:25.94:0,26,211	0/1:11,3:14:4.73:227,0,5	1/1:16,4:18:31.48:410,31,0	0/0:13,0:12:32.23:0,32,252	1/1:3,2:5:11.72:93,12,0	1/1:5,9:12:29.87:285,30,0	1/1:17,3:19:53.96:477,54,0	0/0:4,0:3:8.22:0,8,62	1/1:16,5:21:35.02:422,35,0	0/1:12,1:12:1.33:177,0,1	1/1:19,0:17:7.41:148,7,0	1/1:16,0:15:14.84:138,15,0	1/1:9,1:9:12.44:152,12,0	0/0:13,0:13:35.35:0,35,310	0/0:17,0:16:38.89:0,39,334	0/0:7,0:5:7.82:0,8,57	1/1:12,3:15:43.19:338,43,0	1/1:20,1:20:21.83:404,22,0	0/1:13,0:10:5.55:6,0,13	1/1:15,0:9:1.79:125,2,0
chr10	80185616	.	C	CTA	10865.74	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=13.297;DP=388;FS=14.984;HRun=0;HaplotypeScore=67.4102;InbreedingCoeff=0.9577;MQ=75.33;MQ0=0;MQRankSum=-4.313;QD=47.66;ReadPosRankSum=0.781;VQSLOD=4.4384;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.13:0,45,663	1/1:0,9:9:21.07:385,21,0	0/0:10,0:10:24.05:0,24,340	0/0:8,0:8:21.07:0,21,321	1/1:2,12:14:36.12:649,36,0	0/0:24,0:24:72.24:0,72,1102	0/0:9,0:9:27.08:0,27,393	1/1:8,21:31:84.24:1435,84,0	0/0:9,0:9:27.09:0,27,413	1/1:1,16:18:48.15:851,48,0	1/1:0,21:21:63.22:1155,63,0	0/0:8,0:8:24.07:0,24,346	1/1:2,9:11:27.09:496,27,0	1/1:2,12:14:36.12:661,36,0	1/1:1,8:9:24.08:440,24,0	0/0:12,0:12:36.12:0,36,551	1/1:0,6:6:18.06:330,18,0	1/1:0,1:3:3.01:55,3,0	1/1:15,2:17:48.15:799,48,0	1/1:1,23:25:63.22:1137,63,0	1/1:0,2:2:6.02:110,6,0	0/0:10,0:10:27.09:0,27,413	0/0:18,0:18:51.16:0,51,759	0/0:9,0:9:27.09:0,27,413	1/1:0,15:16:42.14:769,42,0	0/0:17,0:17:51.17:0,51,781	1/1:0,30:31:87.77:1592,88,0	0/0:10,0:9:24.08:0,24,367
chr10	80185618	.	G	GTA	10957.38	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=11.979;DP=391;FS=17.183;HRun=0;HaplotypeScore=67.0329;InbreedingCoeff=0.9740;MQ=74.05;MQ0=0;MQRankSum=-3.220;QD=47.85;ReadPosRankSum=0.218;VQSLOD=4.2032;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.14:0,45,667	1/1:7,0:7:21.07:384,21,0	0/0:10,0:10:24.05:0,24,305	0/0:7,0:7:21.07:0,21,322	1/1:13,0:13:36.12:652,36,0	0/0:26,0:26:75.24:0,75,1126	0/0:8,0:8:24.08:0,24,367	1/1:25,0:25:72.22:1246,72,0	0/0:9,0:9:27.09:0,27,413	1/1:17,0:17:51.17:888,51,0	1/1:21,0:21:63.22:1151,63,0	0/0:9,0:9:21.07:0,21,322	1/1:13,0:13:30.07:485,30,0	1/1:14,0:14:39.13:708,39,0	1/1:12,0:12:33.07:512,33,0	0/0:13,0:13:39.12:0,39,574	1/1:7,0:7:21.04:351,21,0	1/1:5,0:5:9.01:155,9,0	1/1:4,13:19:48.13:820,48,0	1/1:25,0:25:66.21:1160,66,0	1/1:2,0:2:6.02:109,6,0	0/0:10,0:10:27.09:0,27,412	0/0:18,0:18:51.15:0,51,753	0/0:9,0:9:27.09:0,27,413	1/1:16,0:16:42.14:769,42,0	0/0:17,0:17:51.17:0,51,781	1/1:33,0:32:87.77:1568,88,0	0/0:10,0:9:24.08:0,24,367
chr10	80186446	.	G	GTA	969.24	PASS	AB=0.534;AC=4;AF=0.083;AN=48;BaseQRankSum=-5.718;DP=226;FS=7.271;HRun=0;HaplotypeScore=33.1875;InbreedingCoeff=0.2934;MQ=84.35;MQ0=1;MQRankSum=0.738;QD=26.20;ReadPosRankSum=2.771;VQSLOD=3.8855;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:12:5.68:0,6,28	./.	0/0:7,0:4:4.04:0,4,12	0/0:15,0:14:0.44:0,0,18	0/0:11,0:11:18.06:0,18,218	0/1:2,9:11:11.79:315,0,12	0/0:6,0:6:9:0,9,95	0/0:25,0:26:62.96:0,63,694	0/0:6,0:6:12.04:0,12,145	0/0:12,0:12:14.83:0,15,159	0/0:11,0:11:24.07:0,24,291	0/0:5,0:5:6.02:0,6,73	0/0:0,0:1:2.84:0,3,14	0/0:4,0:4:9.03:0,9,109	0/0:6,0:6:6.02:0,6,73	0/0:6,0:6:12.04:0,12,146	0/0:9,0:9:27.08:0,27,325	0/0:7,0:7:14.99:0,15,152	0/0:17,0:17:38.92:0,39,471	0/0:7,0:7:6.02:0,6,73	./.	0/0:4,0:4:6.02:0,6,73	./.	./.	0/0:7,0:7:18.06:0,18,218	1/1:4,8:12:21.04:313,21,0	0/0:5,0:5:6.02:0,6,73	0/1:1,12:14:3.26:451,0,3
chr10	80189493	.	AT	A	8720.57	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=13.223;DP=630;FS=0.000;HRun=7;HaplotypeScore=62.1340;InbreedingCoeff=0.9840;MQ=59.90;MQ0=3;MQRankSum=2.592;QD=26.43;ReadPosRankSum=1.792;VQSLOD=5.4968;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:86.96:0,87,1047	1/1:0,12:12:36.08:367,36,0	0/0:11,0:6:9.03:0,9,109	0/0:14,0:9:21.06:0,21,253	1/1:0,32:32:93.21:949,93,0	0/0:30,0:30:87.27:0,87,1082	0/0:13,0:13:36.12:0,36,453	1/1:4,19:20:13.38:452,13,0	0/0:17,0:17:45.13:0,45,553	1/1:2,27:29:81.18:825,81,0	1/1:1,24:25:66.14:673,66,0	0/0:21,0:21:57.12:0,57,675	0/0:25,0:25:66.18:0,66,794	0/0:19,0:19:54.17:0,54,679	1/1:3,24:27:69.16:704,69,0	0/0:19,0:19:50.83:0,51,614	1/1:6,23:29:72.11:717,72,0	1/1:8,23:31:59.81:667,60,0	1/1:1,18:19:54.12:550,54,0	1/1:1,29:30:81.18:826,81,0	1/1:0,15:15:39.09:398,39,0	0/0:16,0:16:42.13:0,42,528	0/0:26,0:26:69.18:0,69,829	0/0:21,0:21:59.99:0,60,755	1/1:2,22:24:66.15:673,66,0	0/0:29,0:29:75.22:0,75,921	1/1:3,31:34:90.20:918,90,0	0/0:7,0:7:12.04:0,12,151
chr10	80189833	.	A	AT	865.18	PASS	AB=0.770;AC=2;AF=0.036;AN=56;BaseQRankSum=-0.226;DP=579;FS=5.766;HRun=5;HaplotypeScore=62.9754;InbreedingCoeff=0.1048;MQ=65.13;MQ0=2;MQRankSum=-0.012;QD=20.60;ReadPosRankSum=-0.344;VQSLOD=2.7967;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:5,29:34:7.54:939,0,8	0/0:11,0:11:33.07:0,33,347	0/1:8,0:6:7.84:8,0,83	0/0:20,0:15:7.99:0,8,113	0/0:29,0:29:78.18:0,78,830	0/0:23,0:23:69.17:0,69,737	0/0:19,0:19:48.12:0,48,516	0/0:27,0:27:66.14:0,66,694	0/0:21,0:21:60.15:0,60,645	0/0:29,0:29:69.15:0,69,730	0/0:27,0:27:78.19:0,78,838	0/0:17,0:17:45.11:0,45,484	0/0:21,0:21:63.16:0,63,677	0/0:22,0:22:57.14:0,57,613	0/0:18,0:18:48.10:0,48,508	0/0:16,0:16:48.12:0,48,516	0/0:22,0:22:63.16:0,63,674	0/0:16,0:16:42.04:0,42,436	0/0:16,0:15:45.11:0,45,484	0/0:29,0:29:75.19:0,75,806	0/0:8,0:8:24.06:0,24,258	0/0:14,0:14:39.09:0,39,415	0/0:25,0:25:66.16:0,66,709	0/0:11,0:11:30.05:0,30,312	0/0:23,0:23:60.15:0,60,645	0/0:24,0:24:66.17:0,66,709	0/0:36,0:36:90.19:0,90,948	0/0:13,0:13:36.09:0,36,387
chr10	80190378	.	GT	G	454.60	PASS	AB=0.978;AC=15;AF=0.268;AN=56;BaseQRankSum=6.971;DP=491;FS=2.545;HRun=11;HaplotypeScore=95.1850;InbreedingCoeff=0.2758;MQ=57.57;MQ0=1;MQRankSum=-4.541;QD=2.32;ReadPosRankSum=3.025;VQSLOD=-0.4457;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:8.68:9,0,64	0/0:8,0:8:0.11:0,0,2	0/0:14,0:10:19.86:0,20,168	0/0:13,0:9:0.67:0,1,63	0/0:20,0:20:2.24:0,2,140	1/1:4,17:21:50.93:419,51,0	0/0:18,0:18:40.20:0,40,384	0/1:18,0:17:8.07:8,0,69	0/0:20,1:21:32.44:0,32,524	0/1:18,0:17:9.10:9,0,51	0/1:14,0:14:0.40:0,0,13	0/0:16,0:16:39.06:0,39,391	1/1:16,0:16:20.34:60,20,0	1/1:14,0:14:15.20:59,15,0	1/1:21,0:21:2.66:17,3,0	0/1:15,4:22:15.23:15,0,399	0/0:15,0:16:9.49:0,9,32	0/0:10,0:10:1.25:0,1,3	0/0:21,0:18:4:0,4,66	0/1:17,0:17:5.18:5,0,27	0/0:13,0:13:5.96:0,6,43	0/0:20,0:20:48.10:0,48,491	0/0:25,0:25:53.02:0,53,506	0/0:10,0:10:24.06:0,24,255	0/1:12,0:13:8.58:9,0,57	0/0:16,1:17:14.92:0,15,352	0/0:34,0:34:7.17:0,7,108	0/0:18,0:18:44.53:0,45,423
chr10	80190383	.	TTTTTTTGTTG	T	1676.37	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=1.596;DP=506;FS=13.148;HRun=0;HaplotypeScore=174.7080;InbreedingCoeff=0.5604;MQ=58.26;MQ0=1;MQRankSum=-7.332;QD=23.95;ReadPosRankSum=3.474;VQSLOD=2.1564;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:99:189,0,113	0/0:8,0:8:14.96:0,15,166	0/0:14,0:11:21.26:0,21,516	0/0:15,0:11:20.47:0,20,374	0/0:22,0:22:50.74:0,51,536	0/0:20,0:20:49.21:0,49,1497	0/0:17,0:17:45.10:0,45,1619	0/0:18,0:17:27.98:0,28,451	0/0:21,0:21:63.21:0,63,2563	0/0:23,0:22:62.79:0,63,591	0/0:17,0:17:7.87:0,8,369	0/0:16,0:16:42.14:0,42,1546	1/1:0,19:19:33.11:985,33,0	1/1:2,12:14:21.06:614,21,0	0/0:23,0:23:16.12:0,16,182	0/0:23,0:23:64.09:0,64,2422	0/1:16,0:16:23.54:24,0,154	0/0:6,0:6:9.01:0,9,105	0/0:20,0:16:39.88:0,40,423	0/0:23,0:23:66.62:0,67,588	0/0:16,0:16:6.02:0,6,89	0/0:17,0:17:51.18:0,51,1937	0/0:23,0:23:57.19:0,57,1794	0/0:10,0:10:27.08:0,27,1090	0/0:16,0:16:46.20:0,46,507	0/0:18,0:18:51.17:0,51,1861	0/0:34,0:34:85.01:0,85,882	0/0:16,0:16:45.61:0,46,1868
chr10	80190384	.	TTTTTTGTTG	T	1394.08	PASS	AB=0.861;AC=7;AF=0.125;AN=56;BaseQRankSum=3.789;DP=500;FS=3.266;HRun=0;HaplotypeScore=164.5459;InbreedingCoeff=0.4339;MQ=58.32;MQ0=1;MQRankSum=-7.035;QD=16.40;ReadPosRankSum=2.293;VQSLOD=2.9839;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:6,15:21:50.01:421,0,50	0/0:8,0:8:11.73:0,12,104	0/0:15,0:12:31.87:0,32,477	0/0:13,0:9:20.72:0,21,339	0/0:22,0:22:43.56:0,44,336	0/0:20,0:20:53.93:0,54,1343	0/0:17,0:17:45.07:0,45,1386	0/0:18,0:17:7.36:0,7,331	0/0:21,0:21:63.17:0,63,2245	0/0:24,0:23:24.51:0,25,438	0/1:17,0:17:11.28:11,0,296	0/0:14,0:14:42.06:0,42,1263	1/1:19,0:19:33.11:667,33,0	1/1:12,0:12:21.07:412,21,0	0/0:23,0:23:4.22:0,4,111	0/0:23,0:23:66.07:0,66,2108	0/1:16,0:16:23.59:24,0,108	0/0:6,0:6:8.99:0,9,75	0/0:20,0:16:14.52:0,15,284	0/0:23,0:23:57.70:0,58,442	0/0:15,0:15:5.97:0,6,46	0/0:17,0:17:51.12:0,51,1596	0/0:22,0:22:60.04:0,60,1466	0/0:11,0:11:30.07:0,30,1009	0/0:16,0:16:38.94:0,39,346	0/0:17,0:17:51.14:0,51,1568	0/0:34,0:34:69.22:0,69,599	0/0:16,0:16:32.74:0,33,1595
chr10	80190389	.	TG	T	3824.49	PASS	AB=0.833;AC=33;AF=0.589;AN=56;BaseQRankSum=12.744;DP=493;FS=2.896;HRun=1;HaplotypeScore=87.4937;InbreedingCoeff=0.7914;MQ=56.21;MQ0=1;MQRankSum=-4.112;QD=11.99;ReadPosRankSum=-4.267;VQSLOD=0.6658;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:37.73:38,0,64	1/1:0,2:6:8.90:61,9,0	0/0:16,0:14:21.02:0,21,270	0/1:16,0:11:10.72:11,0,82	1/1:4,16:20:31.55:217,32,0	1/1:17,0:17:11.95:31,12,0	0/0:17,0:17:35.32:0,35,442	1/1:8,8:18:43.68:360,44,0	0/0:22,0:22:52.63:0,53,628	1/1:13,8:22:63.46:517,63,0	1/1:10,3:16:47.51:365,48,0	0/0:13,0:14:35.94:0,36,383	1/1:19,0:19:27.92:112,28,0	1/1:12,0:12:17.19:62,17,0	1/1:0,3:24:20.81:163,21,0	0/0:21,1:22:25.76:0,26,488	1/1:1,1:17:14.62:89,15,0	1/1:0,0:6:5.93:40,6,0	1/1:12,3:14:36.75:268,37,0	1/1:17,3:22:62.74:513,63,0	0/1:0,14:14:0:0,0,0	0/0:19,0:19:47.67:0,48,514	0/0:21,0:21:8.17:0,8,421	0/0:11,0:11:30.04:0,30,335	1/1:9,4:15:40.66:328,41,0	0/0:17,0:17:33.13:0,33,444	1/1:24,7:35:83.11:647,83,0	0/0:15,0:15:42.08:0,42,504
chr10	80190392	.	TGTTG	T	5410.85	PASS	AB=1.000;AC=28;AF=0.519;AN=54;BaseQRankSum=11.971;DP=487;FS=9.431;HRun=0;HaplotypeScore=104.9816;InbreedingCoeff=0.8603;MQ=57.91;MQ0=1;MQRankSum=-4.651;QD=20.27;ReadPosRankSum=-3.282;VQSLOD=3.1099;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:38.81:39,0,116	1/1:4,1:6:11.99:152,12,0	0/0:18,0:16:42.61:0,43,803	0/0:20,0:15:34.46:0,34,588	1/1:20,0:20:30.14:275,30,0	0/0:18,0:18:54.15:0,54,1076	0/0:16,0:16:43.33:0,43,960	1/1:15,0:16:38.73:486,39,0	0/0:19,0:19:57.20:0,57,1502	1/1:23,0:22:51.93:704,52,0	1/1:14,1:15:44.73:528,45,0	0/0:15,0:15:45.15:0,45,1018	1/1:19,0:19:29.55:134,30,0	0/1:12,0:12:1.03:57,0,1	1/1:21,2:24:21.07:311,21,0	0/0:23,0:23:66.08:0,66,1463	1/1:16,0:17:14.37:182,14,0	1/1:6,0:6:6.02:119,6,0	1/1:17,1:14:17.54:317,18,0	1/1:20,1:22:58.46:697,58,0	./.	0/0:19,0:19:54.17:0,54,1263	0/0:15,0:15:41.34:0,41,913	0/0:11,0:11:33.11:0,33,793	1/1:14,1:15:38.75:465,39,0	0/0:17,0:17:47.37:0,47,1083	1/1:32,1:34:80.31:946,80,0	0/0:16,0:16:48.16:0,48,1173
chr10	80191098	.	G	GACA	18407.01	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=17.046;DP=543;FS=1.014;HRun=0;HaplotypeScore=111.7963;InbreedingCoeff=0.9914;MQ=81.97;MQ0=0;MQRankSum=-5.207;QD=59.00;ReadPosRankSum=1.395;VQSLOD=6.5565;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:51.17:1055,51,0	1/1:1,11:12:36.12:772,36,0	0/0:19,0:19:57.14:0,57,945	0/0:14,0:14:36.12:0,36,597	1/1:5,39:44:99:2508,132,0	0/0:22,0:22:66.23:0,66,1231	0/0:14,0:14:42.13:0,42,738	1/1:3,18:21:62.95:1106,63,0	0/0:22,0:22:63.22:0,63,1175	1/1:1,19:20:60.20:1282,60,0	1/1:2,22:24:71.83:1421,72,0	0/0:17,0:17:51.17:0,51,933	1/1:4,17:21:63.21:1193,63,0	1/1:0,8:8:24.08:483,24,0	1/1:2,18:20:60.21:1197,60,0	0/0:16,0:16:48.15:0,48,864	1/1:1,9:10:27.09:547,27,0	1/1:0,10:10:27.09:559,27,0	1/1:3,16:19:57.20:1246,57,0	1/1:2,25:27:78.27:1566,78,0	1/1:4,13:17:48.15:986,48,0	0/0:29,0:29:87.28:0,87,1584	0/0:26,0:26:75.26:0,75,1378	0/0:11,0:11:33.11:0,33,614	1/1:2,22:24:72.23:1490,72,0	0/0:25,1:26:9.11:0,9,1330	1/1:3,14:17:50.65:997,51,0	0/0:15,0:15:42.14:0,42,783
chr10	80191099	.	CT	C	8097.51	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=18.059;DP=546;FS=3.192;HRun=2;HaplotypeScore=127.0326;InbreedingCoeff=0.9992;MQ=83.22;MQ0=0;MQRankSum=-6.514;QD=25.95;ReadPosRankSum=1.624;VQSLOD=4.7621;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:50.79:461,51,0	1/1:1,11:12:35.97:353,36,0	0/0:21,0:21:60.15:0,60,818	0/0:14,0:14:33.06:0,33,420	1/1:4,40:44:99:1123,127,0	0/0:22,0:22:66.22:0,66,989	0/0:13,0:13:36.12:0,36,540	1/1:5,18:23:65.65:502,66,0	0/0:23,0:23:66.21:0,66,968	1/1:0,19:19:57.02:589,57,0	1/1:2,22:24:71.53:632,72,0	0/0:17,0:17:48.16:0,48,720	1/1:3,18:21:58.59:503,59,0	1/1:0,8:8:23.76:204,24,0	1/1:3,18:21:59.57:516,60,0	0/0:15,0:15:45.15:0,45,675	1/1:1,9:10:23.96:224,24,0	1/1:0,10:10:26.97:245,27,0	1/1:3,16:19:53.97:528,54,0	1/1:2,25:27:77.68:684,78,0	1/1:3,13:16:46.31:447,46,0	0/0:29,0:29:84.28:0,84,1259	0/0:26,0:26:78.26:0,78,1150	0/0:13,0:13:39.08:0,39,541	1/1:1,22:23:65.76:622,66,0	0/0:25,1:26:44.10:0,44,1067	1/1:3,14:17:50.88:464,51,0	0/0:15,0:15:42.14:0,42,630
chr10	80193947	.	AAC	A	1037.76	PASS	AB=0.930;AC=12;AF=0.214;AN=56;BaseQRankSum=0.512;DP=722;FS=10.327;HRun=0;HaplotypeScore=127.6036;InbreedingCoeff=0.3162;MQ=70.02;MQ0=7;MQRankSum=1.478;QD=5.04;ReadPosRankSum=0.089;VQSLOD=2.0074;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:41:83.42:0,83,711	0/0:10,0:10:21.07:0,21,315	0/0:44,0:28:17.19:0,17,172	0/0:35,0:23:24.06:0,24,306	0/0:32,0:32:33.47:0,33,953	1/1:1,18:20:38.95:443,39,0	0/0:37,1:38:42.49:0,42,1127	0/1:26,0:26:2.65:3,0,414	0/0:23,1:24:30.46:0,30,949	0/0:30,0:30:35.36:0,35,844	0/1:23,3:27:22.17:22,0,837	0/0:13,0:13:33.11:0,33,521	0/0:20,0:29:40.33:0,40,337	0/0:20,0:21:8.89:0,9,98	0/0:27,0:27:28.56:0,29,867	0/0:24,1:26:27.42:0,27,864	0/1:22,2:24:11.26:11,0,798	0/1:20,2:22:29.41:29,0,498	0/0:14,0:14:10.39:0,10,447	0/0:27,1:28:24.43:0,24,829	0/0:36,2:39:28.66:0,29,1124	0/1:18,3:21:10.46:10,0,554	0/0:17,0:17:27.09:0,27,424	0/0:27,0:27:33.99:0,34,1001	0/0:21,0:21:20.19:0,20,552	1/1:11,15:25:0.34:466,0,0	0/1:27,1:28:7.34:7,0,826	1/1:3,9:10:18.01:199,18,0
chr10	80194013	.	T	TACACCACACC	22140.31	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-5.410;DP=726;FS=2.083;HRun=0;HaplotypeScore=215.0702;InbreedingCoeff=0.9438;MQ=74.25;MQ0=1;MQRankSum=-12.415;QD=57.06;ReadPosRankSum=0.018;VQSLOD=4.4047;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:34:57.13:612,57,0	1/1:2,6:9:15.05:758,15,0	0/0:49,0:43:65.66:0,66,1423	0/0:60,0:57:6.11:0,6,1416	1/1:14,15:30:30.06:1294,30,0	0/0:20,0:20:42.10:0,42,1080	0/0:41,0:41:90.29:0,90,2550	1/1:33,0:33:51.15:1388,51,0	0/0:23,0:23:57.20:0,57,1670	1/1:10,17:30:57.20:2149,57,0	1/1:11,8:21:21.07:952,21,0	0/0:18,0:18:48.15:0,48,1377	1/1:4,14:21:27.05:1231,27,0	1/1:5,13:23:36.12:1816,36,0	1/1:9,11:21:39.13:1729,39,0	0/0:28,0:28:60.21:0,60,1733	1/1:8,16:26:36.12:1796,36,0	1/1:7,8:16:24.08:1102,24,0	1/1:7,8:16:33.10:1089,33,0	1/1:11,18:29:54.10:2210,54,0	1/1:20,12:33:12.04:514,12,0	0/0:26,0:26:66.22:0,66,1854	0/0:14,0:14:30.10:0,30,868	0/0:26,0:26:69.24:0,69,1887	1/1:10,14:25:36.12:1757,36,0	0/0:22,0:22:0.73:0,1,1551	1/1:9,11:20:36.12:1744,36,0	0/0:10,0:10:22.92:0,23,663
chr10	80195541	.	AG	A	701.98	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.497;DP=330;FS=1.097;HRun=1;HaplotypeScore=38.8138;InbreedingCoeff=0.9281;MQ=71.85;MQ0=0;MQRankSum=-1.833;QD=36.95;ReadPosRankSum=0.290;VQSLOD=3.3932;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:57.19:797,57,0	0/0:4,0:4:12.04:0,12,192	0/0:21,0:20:60.20:0,60,928	0/0:14,0:14:39.11:0,39,575	0/0:12,0:12:36.12:0,36,576	0/0:4,0:4:12.04:0,12,192	0/0:8,0:8:24.08:0,24,384	0/0:22,0:22:63.20:0,63,964	0/0:8,0:8:24.08:0,24,381	0/0:8,0:8:24.07:0,24,363	0/0:11,0:11:33.11:0,33,528	0/0:11,0:11:33.11:0,33,527	0/0:11,0:11:33.11:0,33,527	0/0:11,0:11:33.11:0,33,525	0/0:7,0:7:21.07:0,21,333	0/0:11,0:11:33.11:0,33,528	0/0:17,0:17:51.17:0,51,815	0/0:13,0:13:36.12:0,36,574	0/0:14,0:14:42.14:0,42,672	0/0:12,0:12:36.12:0,36,576	0/0:16,0:16:48.13:0,48,717	0/0:9,0:9:27.09:0,27,432	0/0:11,0:11:33.11:0,33,528	0/0:12,0:12:36.12:0,36,576	0/0:11,0:11:33.11:0,33,528	0/0:10,0:10:30.10:0,30,478	0/0:13,0:13:39.13:0,39,623	0/0:10,0:10:24.08:0,24,372
chr10	80195592	.	T	TATA	1131.44	PASS	AB=0.857;AC=32;AF=0.727;AN=44;BaseQRankSum=0.159;DP=211;FS=0.000;HRun=0;HaplotypeScore=39.0251;InbreedingCoeff=0.2484;MQ=62.83;MQ0=0;MQRankSum=-2.390;QD=7.40;ReadPosRankSum=-3.322;VQSLOD=0.7063;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:14:21.02:0,21,234	./.	./.	./.	1/1:10,0:10:3.01:37,3,0	1/1:4,0:4:6.02:78,6,0	0/0:2,0:2:3.01:0,3,39	0/1:29,0:29:19.76:124,0,20	0/0:3,0:3:6.02:0,6,78	./.	1/1:10,0:10:3.01:55,3,0	0/0:6,0:6:3.01:0,3,39	1/1:7,0:9:6.02:78,6,0	1/1:9,0:9:3.01:39,3,0	1/1:1,0:2:3.01:39,3,0	./.	1/1:8,0:11:6:62,6,0	1/1:11,0:11:2.98:21,3,0	1/1:6,0:8:9.03:144,9,0	1/1:5,0:5:3.01:57,3,0	1/1:2,1:3:3.01:57,3,0	./.	1/1:6,1:8:3.01:57,3,0	0/0:5,0:5:3.01:0,3,39	0/1:6,1:10:24.09:187,0,24	1/1:4,0:5:3.01:57,3,0	1/1:6,3:9:3.01:57,3,0	1/1:6,4:10:6.02:114,6,0
chr10	80195639	.	TTCC	T	414.70	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.749;DP=272;FS=12.850;HRun=0;HaplotypeScore=44.1926;InbreedingCoeff=0.5648;MQ=68.56;MQ0=0;MQRankSum=-0.781;QD=24.39;ReadPosRankSum=1.093;VQSLOD=1.8186;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,7:17:39.09:509,39,0	0/0:1,0:1:3.01:0,3,51	0/0:13,0:11:29.91:0,30,594	0/0:14,0:13:22.44:0,22,384	0/0:13,0:13:36.12:0,36,710	0/0:5,0:5:15.05:0,15,315	0/0:3,0:3:6.02:0,6,126	0/0:35,0:35:72.22:0,72,1384	0/0:9,0:9:22.63:0,23,424	0/0:11,0:11:30.10:0,30,631	0/0:11,0:11:33.11:0,33,662	0/0:3,0:3:8.99:0,9,142	0/0:8,0:8:21.07:0,21,418	0/0:4,0:4:12.04:0,12,252	0/0:7,0:7:20.28:0,20,381	0/0:2,0:2:6.02:0,6,122	0/0:20,0:20:47.76:0,48,982	0/0:16,0:16:45.15:0,45,895	0/0:15,0:15:39.13:0,39,751	0/0:9,0:9:24.08:0,24,500	0/0:4,0:4:12.03:0,12,210	0/0:9,0:9:27.09:0,27,546	0/0:7,0:7:18.06:0,18,365	0/0:3,0:3:9.03:0,9,185	0/0:15,0:15:39.13:0,39,791	0/0:3,0:3:9.03:0,9,182	0/0:5,0:5:9.03:0,9,181	0/0:10,0:10:24.06:0,24,406
chr10	80196517	.	GGT	G	978.24	PASS	AB=0.750;AC=25;AF=0.500;AN=50;BaseQRankSum=1.884;DP=84;FS=2.859;HRun=0;HaplotypeScore=15.5969;InbreedingCoeff=0.4923;MQ=56.50;MQ0=4;MQRankSum=-1.743;QD=20.81;ReadPosRankSum=0.930;VQSLOD=3.3508;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,3:4:6.02:76,6,0	0/0:2,0:2:5.93:0,6,61	0/0:9,0:4:9:0,9,121	1/1:0,4:4:12.04:151,12,0	0/1:2,1:3:28.82:29,0,90	0/0:1,0:1:3.01:0,3,50	1/1:1,9:9:20.98:226,21,0	./.	1/1:0,1:1:3.01:38,3,0	1/1:1,2:3:6.02:76,6,0	0/0:1,0:1:3.01:0,3,50	0/0:3,0:3:9.03:0,9,147	0/0:3,0:3:9.03:0,9,137	1/1:0,2:2:6.02:76,6,0	0/0:1,0:1:3.01:0,3,50	1/1:0,9:9:18.01:207,18,0	1/1:0,2:2:3.01:37,3,0	1/1:0,1:1:3.01:38,3,0	1/1:0,1:1:3.01:38,3,0	./.	0/0:6,0:6:18.06:0,18,287	0/0:2,0:2:3.01:0,3,50	0/0:1,0:1:3.01:0,3,50	1/1:1,4:5:9.03:112,9,0	0/0:1,0:1:3.01:0,3,50	1/1:0,2:2:3.01:38,3,0	0/0:5,0:3:3.01:0,3,49
chr10	80196646	.	CACACACACACACACAG	C	837.02	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.061;DP=396;FS=0.810;HRun=0;HaplotypeScore=140.6431;InbreedingCoeff=-0.0464;MQ=51.15;MQ0=18;MQRankSum=0.241;QD=3.59;ReadPosRankSum=-1.483;VQSLOD=2.5940;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:10.94:11,0,336	0/0:4,0:4:9.03:0,9,468	0/1:32,0:13:12.46:12,0,124	0/1:43,0:9:34.93:35,0,72	0/1:11,0:11:10.94:11,0,511	0/0:17,0:17:13.16:0,13,1277	0/0:16,0:16:39.08:0,39,2271	0/1:27,0:25:99:103,0,1218	0/0:7,0:7:14.98:0,15,519	0/1:12,0:11:31.96:32,0,944	0/0:8,0:8:15.02:0,15,604	0/0:8,0:7:17.65:0,18,979	1/1:0,6:6:6.02:269,6,0	1/1:1,7:8:9.03:404,9,0	0/0:9,0:9:18.06:0,18,877	0/0:15,0:15:21.05:0,21,1595	0/1:16,0:16:4.94:5,0,555	0/1:18,0:18:11.23:11,0,1315	0/1:9,0:9:5.55:6,0,516	0/0:10,0:10:9.03:0,9,535	0/1:18,0:16:66.95:67,0,709	0/0:11,0:11:18.05:0,18,1063	0/0:8,0:8:12.03:0,12,491	0/0:21,0:20:42.14:0,42,2583	0/0:12,0:12:21.07:0,21,1243	0/1:17,0:15:26.97:27,0,1515	0/0:13,0:12:7.94:0,8,490	0/0:4,0:4:6.02:0,6,311
chr10	80196660	.	CAG	C	1331.91	PASS	AB=0.967;AC=30;AF=0.536;AN=56;BaseQRankSum=5.294;DP=387;FS=2.725;HRun=0;HaplotypeScore=61.7048;InbreedingCoeff=0.1609;MQ=51.13;MQ0=22;MQRankSum=-0.370;QD=4.38;ReadPosRankSum=-3.918;VQSLOD=1.1952;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:11.73:95,12,0	0/1:3,0:3:9.02:27,0,9	0/1:33,0:7:3.64:53,0,4	0/1:42,0:5:26.54:30,0,27	1/1:9,0:9:4.40:26,4,0	1/1:19,0:19:21.27:181,21,0	0/0:18,0:18:47.36:0,47,561	0/1:10,18:25:29.05:247,0,29	0/0:9,0:9:20.94:0,21,198	0/1:12,0:11:2.52:97,0,3	0/1:6,0:6:17.58:18,0,29	0/0:9,0:8:22.81:0,23,226	1/1:6,0:6:5.88:36,6,0	1/1:8,0:8:8.83:53,9,0	0/1:8,0:8:1.90:65,0,2	0/0:13,0:13:23.84:0,24,257	0/1:13,0:13:12.48:47,0,12	1/1:18,1:19:7.73:115,8,0	0/1:8,0:8:6.98:30,0,7	1/1:9,0:9:5.98:46,6,0	1/1:20,0:18:6.37:112,6,0	0/0:8,0:8:18:0,18,200	0/0:7,0:7:10.39:0,10,83	0/0:19,0:18:32.07:0,32,512	0/1:12,0:12:16.55:28,0,17	0/1:17,0:15:5.80:155,0,6	1/1:13,0:13:6.56:30,7,0	0/1:4,0:4:6.47:18,0,6
chr10	80196664	.	C	CAG	1320.74	PASS	AB=0.798;AC=17;AF=0.304;AN=56;BaseQRankSum=4.152;DP=390;FS=2.051;HRun=0;HaplotypeScore=64.9342;InbreedingCoeff=0.1249;MQ=51.33;MQ0=21;MQRankSum=2.381;QD=7.63;ReadPosRankSum=1.188;VQSLOD=2.9923;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:12.15:0,12,94	1/1:3,0:3:1.68:30,2,0	0/0:32,0:7:9.52:0,10,113	0/0:41,0:5:5.30:0,5,69	1/1:1,7:8:9.03:173,9,0	0/1:18,0:18:16.41:52,0,16	0/0:18,0:18:48.09:0,48,625	0/1:29,0:26:62.35:196,0,62	0/0:8,0:8:18.04:0,18,252	1/1:11,0:10:16.51:161,17,0	0/1:3,1:4:4.70:50,0,5	0/0:9,0:8:23.99:0,24,237	0/0:6,0:6:5.72:0,6,29	0/0:7,0:7:8.56:0,9,44	1/1:8,0:8:6.67:87,7,0	0/0:14,0:14:32.97:0,33,328	0/1:7,8:15:39.13:39,0,66	0/1:8,10:20:44.36:194,0,44	0/1:9,1:10:11.89:66,0,12	0/0:5,5:10:6.78:0,7,24	0/1:19,0:17:25.23:139,0,25	0/0:8,0:8:14.97:0,15,120	0/0:7,0:7:9.47:0,9,95	0/0:19,0:18:45.06:0,45,581	0/1:5,8:13:53.15:196,0,53	0/0:17,0:15:8.05:0,8,130	0/1:4,11:14:9.35:105,0,9	0/0:4,0:4:3.46:0,3,24
chr10	80196971	.	A	AG	2516.68	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.011;DP=570;FS=3.259;HRun=0;HaplotypeScore=54.4449;InbreedingCoeff=0.9941;MQ=87.35;MQ0=0;MQRankSum=-5.682;QD=39.95;ReadPosRankSum=0.341;VQSLOD=4.0215;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:51.15:790,51,0	0/0:6,0:6:18.05:0,18,237	0/0:22,0:22:66.21:0,66,894	0/0:18,0:18:44.94:0,45,586	0/0:23,0:23:66.22:0,66,920	0/0:25,0:25:75.25:0,75,1049	0/0:13,0:13:39.13:0,39,546	0/0:23,0:23:66.20:0,66,881	0/0:14,0:14:42.13:0,42,570	0/0:27,0:27:81.26:0,81,1117	0/0:28,0:28:81.27:0,81,1127	0/0:12,0:12:36.11:0,36,486	1/1:0,26:26:72.25:1150,72,0	1/1:0,19:19:45.15:719,45,0	0/0:21,0:21:63.21:0,63,881	0/0:13,0:13:39.13:0,39,546	0/0:14,0:14:42.14:0,42,587	0/0:14,0:13:42.14:0,42,585	0/0:14,0:14:42.12:0,42,554	0/0:37,0:37:99:0,108,1428	0/0:12,0:12:36.11:0,36,483	0/0:26,0:26:75.23:0,75,1013	0/0:29,0:29:81.27:0,81,1132	0/0:6,0:6:18.06:0,18,252	0/0:21,0:21:63.19:0,63,837	0/0:25,0:25:72.23:0,72,991	0/0:40,0:40:99:0,117,1617	0/0:24,0:24:72.19:0,72,939
chr10	80197847	.	CATCCATAGT	C	15956.38	PASS	AB=0.950;AC=27;AF=0.482;AN=56;BaseQRankSum=14.575;DP=463;FS=0.000;HRun=0;HaplotypeScore=146.3002;InbreedingCoeff=0.9100;MQ=75.20;MQ0=0;MQRankSum=-14.895;QD=61.61;ReadPosRankSum=1.785;VQSLOD=4.7557;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.13:0,45,1779	1/1:1,10:11:30.10:896,30,0	0/0:14,0:14:16.65:0,17,996	0/0:12,0:12:29.31:0,29,1002	1/1:6,28:34:60.21:1811,60,0	0/0:21,0:21:60.19:0,60,2699	0/0:12,0:12:36.12:0,36,1605	1/1:6,17:23:51.16:1465,51,0	0/0:15,0:15:42.14:0,42,1807	1/1:2,22:24:66.20:1820,66,0	1/1:5,16:21:51.18:1575,51,0	0/0:12,0:12:36.10:0,36,1444	0/0:21,0:21:60.19:0,60,2612	0/0:17,0:17:51.16:0,51,2333	1/1:2,14:16:39.13:1203,39,0	0/0:9,0:9:27.09:0,27,1190	1/1:2,15:17:36.12:1060,36,0	1/1:1,4:5:9.03:279,9,0	1/1:3,11:14:33.07:837,33,0	1/1:8,28:36:81.28:2470,81,0	1/1:1,6:7:9.03:274,9,0	0/0:8,0:8:24.08:0,24,1110	0/0:27,0:27:81.28:0,81,3721	0/0:9,0:9:24.07:0,24,1050	1/1:2,13:15:30.10:929,30,0	0/1:18,1:19:35.82:36,0,2424	1/1:1,16:17:42.14:1302,42,0	0/0:11,0:11:33.11:0,33,1595
chr10	80198268	.	AACACACACAC	A	1043.78	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.618;DP=533;FS=5.975;HRun=0;HaplotypeScore=145.8492;InbreedingCoeff=0.6848;MQ=74.95;MQ0=13;MQRankSum=-4.732;QD=22.21;ReadPosRankSum=1.233;VQSLOD=2.4318;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:26:9.01:0,9,232	0/0:6,0:6:2.90:0,3,16	0/0:29,0:19:5.91:0,6,39	0/0:34,0:26:9.90:0,10,107	0/0:17,0:17:17.94:0,18,262	0/0:23,0:24:40.55:0,41,1291	0/0:9,0:16:9.48:0,9,167	0/0:17,0:15:21.01:0,21,291	0/0:18,0:18:27.09:0,27,1022	0/0:16,0:16:24.05:0,24,342	0/0:22,0:22:23.98:0,24,924	0/0:15,0:15:18.02:0,18,456	1/1:14,3:18:24.04:570,24,0	1/1:14,15:28:20.66:592,21,0	0/0:17,0:17:9.01:0,9,197	0/0:11,0:14:21.07:0,21,888	0/0:24,0:24:2.57:0,3,19	0/0:13,0:12:24.78:0,25,334	0/0:19,0:19:15.82:0,16,139	0/0:11,0:11:12.01:0,12,183	0/0:31,0:30:35.87:0,36,574	0/0:20,0:22:33.10:0,33,1342	0/0:21,0:21:33.06:0,33,1045	0/0:24,0:24:41.98:0,42,1656	0/0:5,0:6:9.47:0,9,146	0/0:16,0:16:32.46:0,32,1047	0/0:11,0:14:18:0,18,224	0/0:8,0:9:21.07:0,21,621
chr10	80198302	.	CACACACAT	C	1550.88	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=-1.098;DP=573;FS=2.832;HRun=0;HaplotypeScore=134.4981;InbreedingCoeff=-0.1479;MQ=53.45;MQ0=23;MQRankSum=-1.879;QD=5.81;ReadPosRankSum=-1.534;VQSLOD=1.7575;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:32.51:0,33,349	1/1:2,5:7:2.11:35,2,0	0/0:32,0:11:30:0,30,286	0/0:28,0:18:51:0,51,514	0/0:16,0:16:10.70:0,11,101	0/0:23,0:23:47.93:0,48,1118	0/0:18,0:18:27.01:0,27,396	0/1:31,0:29:30.91:271,0,31	0/0:18,0:18:40.88:0,41,1083	0/1:16,0:16:84.06:135,0,84	0/1:18,0:18:36.46:36,0,602	0/0:17,0:17:38.94:0,39,733	0/1:20,0:20:99:173,0,146	0/1:23,0:22:86.84:203,0,87	0/0:15,0:15:6:0,6,75	0/0:13,0:13:28.32:0,28,810	0/1:24,0:24:0.11:0,0,0	0/1:16,0:14:29.32:136,0,29	0/1:15,0:11:32.37:74,0,32	0/1:13,0:12:31.03:141,0,31	0/1:55,0:52:93.22:364,0,93	0/0:19,0:19:44.92:0,45,1317	0/0:22,0:22:38.39:0,38,923	0/0:26,0:26:54.14:0,54,1609	0/1:14,0:14:62.46:62,0,92	0/0:19,0:16:42.49:0,42,922	0/1:15,0:15:31.38:70,0,31	0/0:8,0:8:23:0,23,416
chr10	80198306	.	CACAT	C	3112.17	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=-1.690;DP=558;FS=0.871;HRun=0;HaplotypeScore=98.0337;InbreedingCoeff=0.7031;MQ=56.88;MQ0=21;MQRankSum=-0.999;QD=11.79;ReadPosRankSum=-0.493;VQSLOD=2.6766;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:32.22:0,32,266	1/1:7,0:7:3.35:18,3,0	0/0:29,0:13:39.02:0,39,384	0/0:31,0:24:62.18:0,62,642	1/1:4,10:14:9.03:141,9,0	0/0:24,0:24:50.90:0,51,775	0/0:17,0:17:23.98:0,24,266	1/1:31,0:28:66.23:536,66,0	0/0:20,0:20:20.62:0,21,714	1/1:15,0:15:36.03:345,36,0	0/1:17,0:17:71.69:72,0,138	0/0:16,0:16:19.72:0,20,461	0/1:20,0:20:11.39:11,0,178	0/1:23,0:22:34.56:35,0,91	1/1:15,0:15:0.26:1,0,0	0/0:14,0:14:30.02:0,30,516	0/0:23,0:23:0:0,0,0	1/1:13,1:13:29.91:276,30,0	1/1:13,0:9:17.68:132,18,0	1/1:13,1:13:33.86:335,34,0	1/1:54,0:52:97.05:832,97,0	0/0:20,0:20:47.96:0,48,863	0/0:18,0:18:38.59:0,39,605	0/0:23,0:23:54.11:0,54,1058	1/1:14,0:14:27.82:233,28,0	0/0:19,0:16:44.97:0,45,649	1/1:13,0:13:35.39:350,35,0	0/0:8,0:8:20.44:0,20,234
chr10	80198308	.	CAT	C	2953.37	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=-2.467;DP=556;FS=0.000;HRun=0;HaplotypeScore=84.2221;InbreedingCoeff=0.7962;MQ=58.48;MQ0=19;MQRankSum=0.004;QD=11.77;ReadPosRankSum=0.108;VQSLOD=2.9466;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:32.54:0,33,258	1/1:7,0:7:3.81:19,4,0	0/0:31,0:14:42.02:0,42,417	0/0:31,0:25:50.68:0,51,645	1/1:14,0:14:11.87:85,12,0	0/0:25,0:25:41.32:0,41,555	0/0:16,0:16:26.99:0,27,280	1/1:29,0:26:67.37:527,67,0	0/0:19,0:19:46.74:0,47,544	1/1:15,0:15:35.97:319,36,0	0/1:17,0:17:8.11:162,0,8	0/0:16,0:16:37.30:0,37,373	0/0:21,0:21:23.06:0,23,278	0/0:24,0:23:25.03:0,25,165	1/1:1,14:15:2.90:46,3,0	0/0:13,0:13:5.38:0,5,336	0/1:22,0:22:0:0,0,0	1/1:13,0:12:32.85:254,33,0	1/1:13,0:9:17.68:132,18,0	1/1:15,0:14:38.92:326,39,0	1/1:56,0:54:93.90:808,94,0	0/0:20,0:20:42.22:0,42,638	0/0:18,0:18:28.83:0,29,462	0/0:24,0:24:57.09:0,57,819	1/1:14,0:14:25.21:227,25,0	0/0:19,0:16:22.65:0,23,434	1/1:13,0:13:29.85:254,30,0	0/1:8,0:8:2.63:3,0,107
chr10	80198478	.	A	AGTGTGT	5030.63	PASS	AB=0.818;AC=35;AF=0.673;AN=52;BaseQRankSum=-0.725;DP=476;FS=1.586;HRun=0;HaplotypeScore=122.8215;InbreedingCoeff=0.6978;MQ=65.78;MQ0=10;MQRankSum=-5.450;QD=18.10;ReadPosRankSum=-1.447;VQSLOD=4.2412;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:2.73:0,3,12	1/1:2,0:2:3.01:96,3,0	./.	./.	1/1:9,0:10:12.04:239,12,0	1/1:16,0:16:12.03:219,12,0	0/0:8,0:10:9.03:0,9,144	1/1:30,0:29:26.01:410,26,0	0/0:15,0:15:18.03:0,18,274	1/1:10,0:11:6.02:83,6,0	1/1:8,0:9:1.06:45,1,0	0/0:10,0:12:6.02:0,6,84	1/1:16,4:21:24.08:597,24,0	1/1:12,1:19:12.04:311,12,0	0/1:7,0:9:31.28:31,0,56	0/0:21,0:21:27:0,27,492	1/1:16,0:16:19.59:428,20,0	1/1:16,0:14:24.05:353,24,0	1/1:21,2:23:30.10:729,30,0	1/1:11,3:14:12.04:333,12,0	1/1:27,0:27:7.91:193,8,0	0/0:9,0:9:9.02:0,9,182	0/0:11,0:14:17.93:0,18,345	0/0:23,0:26:33.09:0,33,555	1/1:9,2:11:9.03:254,9,0	1/1:14,0:14:11.86:146,12,0	1/1:17,0:18:18.06:402,18,0	1/1:5,0:6:6.02:163,6,0
chr10	80198533	.	A	AT	7009.85	PASS	AB=0.732;AC=26;AF=0.464;AN=56;BaseQRankSum=-8.502;DP=422;FS=3.812;HRun=0;HaplotypeScore=62.1411;InbreedingCoeff=0.8255;MQ=75.36;MQ0=3;MQRankSum=-1.267;QD=40.06;ReadPosRankSum=1.751;VQSLOD=5.5521;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.08:0,75,958	1/1:0,1:1:3.01:48,3,0	0/0:32,0:26:56.59:0,57,857	0/0:33,0:29:81.19:0,81,1090	1/1:0,9:9:27.09:431,27,0	0/0:17,0:17:48.16:0,48,671	0/0:16,0:16:45.15:0,45,628	1/1:0,27:27:81.23:1253,81,0	0/0:7,0:7:21.07:0,21,293	1/1:0,15:15:45.15:719,45,0	1/1:0,9:9:24.08:383,24,0	0/0:6,0:6:18.05:0,18,236	0/0:21,0:20:57.18:0,57,778	0/0:17,0:17:42.14:0,42,586	1/1:0,7:7:20.90:272,21,0	0/0:17,0:17:51.15:0,51,675	1/1:0,15:15:38.84:621,39,0	0/1:1,4:5:24.20:176,0,24	1/1:1,20:21:60.14:876,60,0	1/1:0,15:15:42.09:641,42,0	1/1:3,19:22:54.18:836,54,0	0/0:17,0:17:51.14:0,51,674	0/0:16,0:16:45.15:0,45,629	0/0:16,0:16:48.16:0,48,670	1/1:0,8:8:18.06:287,18,0	0/1:9,1:10:17.87:18,0,333	1/1:0,11:11:29.86:449,30,0	0/0:5,0:5:12.01:0,12,148
chr10	80198665	.	ACCACC	A	739.23	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=3.633;DP=284;FS=3.255;HRun=0;HaplotypeScore=70.3288;InbreedingCoeff=0.3258;MQ=60.56;MQ0=9;MQRankSum=-3.259;QD=15.73;ReadPosRankSum=-0.425;VQSLOD=2.9260;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:23:21.07:453,21,0	0/0:2,0:2:6.01:0,6,102	0/0:19,0:5:14.87:0,15,118	0/0:18,0:9:26.95:0,27,317	0/0:9,0:9:20.82:0,21,429	0/0:6,0:6:15.01:0,15,187	0/0:5,0:5:15.01:0,15,317	0/0:19,0:19:57.05:0,57,827	0/0:11,0:11:33.09:0,33,821	0/0:8,0:8:17.79:0,18,186	0/0:6,0:6:12.02:0,12,268	0/0:8,0:8:24.07:0,24,650	0/1:7,0:7:34.44:128,0,34	0/1:9,0:9:28.01:272,0,28	0/0:10,0:10:27.07:0,27,538	0/0:13,0:13:39.11:0,39,1016	0/0:11,0:11:27.06:0,27,515	0/0:5,0:5:15.02:0,15,205	0/0:11,0:9:27.02:0,27,459	0/0:7,0:7:14.94:0,15,313	0/0:9,0:9:18.49:0,18,258	0/0:7,0:7:13.96:0,14,240	0/0:10,0:10:27.04:0,27,547	0/0:18,0:18:54.14:0,54,1331	0/0:5,0:5:10.96:0,11,258	0/1:8,0:8:0.43:0,0,290	0/0:15,0:14:28.47:0,28,402	0/0:5,0:5:15.05:0,15,327
chr10	80198682	.	C	CACCACC	1797.92	PASS	AB=1.000;AC=33;AF=0.611;AN=54;BaseQRankSum=1.471;DP=300;FS=21.712;HRun=0;HaplotypeScore=87.4117;InbreedingCoeff=0.7361;MQ=46.13;MQ0=16;MQRankSum=-4.833;QD=11.75;ReadPosRankSum=-0.464;VQSLOD=0.8004;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:18.43:0,18,218	1/1:4,0:4:3.01:53,3,0	./.	0/0:23,0:12:11.82:0,12,128	1/1:8,0:8:15.05:235,15,0	1/1:4,0:3:3.01:78,3,0	0/0:5,0:5:9.03:0,9,163	1/1:24,0:20:12.27:139,12,0	0/0:10,0:10:24.08:0,24,445	1/1:8,0:8:6.02:74,6,0	1/1:8,0:7:8.94:81,9,0	0/0:9,0:9:21.05:0,21,379	0/0:7,0:7:12.04:0,12,163	0/0:7,0:7:18.06:0,18,246	1/1:11,0:10:12.04:147,12,0	0/0:14,0:14:30.10:0,30,576	1/1:11,0:11:12.04:167,12,0	1/1:2,0:2:3.01:42,3,0	1/1:15,0:13:14.46:225,14,0	1/1:10,0:10:6.02:67,6,0	1/1:6,0:6:5.51:62,6,0	0/1:5,0:5:1.26:1,0,102	0/0:8,0:8:12:0,12,246	0/0:16,0:16:39.10:0,39,681	1/1:9,0:9:6.02:68,6,0	1/1:5,0:5:6.02:84,6,0	1/1:12,4:17:14.95:410,15,0	1/1:5,0:5:6:59,6,0
chr10	80198683	.	ACC	A	75.75	PASS	AB=0.681;AC=2;AF=0.036;AN=56;BaseQRankSum=2.265;DP=300;FS=7.185;HRun=2;HaplotypeScore=70.5554;InbreedingCoeff=-0.0328;MQ=46.13;MQ0=16;MQRankSum=-1.456;QD=5.41;ReadPosRankSum=1.451;VQSLOD=-0.5362;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:28.06:0,28,224	0/0:4,0:4:10.77:0,11,92	0/0:22,0:5:15.04:0,15,182	0/0:22,0:11:29.58:0,30,397	0/0:8,0:8:22.51:0,23,310	0/0:3,0:2:3.01:0,3,50	0/0:5,0:5:15.05:0,15,259	0/0:24,0:20:51.05:0,51,640	0/0:9,0:9:27.09:0,27,539	0/0:8,0:8:18.82:0,19,176	0/0:9,0:8:20.58:0,21,235	0/0:9,0:9:27.09:0,27,503	0/1:5,2:7:45.50:54,0,45	0/1:2,5:7:14.39:110,0,14	0/0:11,0:10:26.47:0,26,340	0/0:14,0:14:39.12:0,39,728	0/0:11,0:11:23.60:0,24,355	0/0:2,0:2:5.89:0,6,72	0/0:15,0:13:33.05:0,33,435	0/0:10,0:10:28.56:0,29,260	0/0:6,0:6:11.71:0,12,112	0/0:5,0:5:9.72:0,10,164	0/0:8,0:8:20.97:0,21,379	0/0:16,0:16:48.16:0,48,917	0/0:9,0:9:26.21:0,26,239	0/0:5,0:5:10.58:0,11,191	0/0:18,0:17:37.04:0,37,301	0/0:5,0:5:15.05:0,15,290
chr10	80198686	.	ACCAC	A	481.45	PASS	AB=0.949;AC=11;AF=0.196;AN=56;BaseQRankSum=5.518;DP=315;FS=25.935;HRun=0;HaplotypeScore=81.7727;InbreedingCoeff=-0.2604;MQ=46.85;MQ0=16;MQRankSum=-5.693;QD=4.59;ReadPosRankSum=-1.135;VQSLOD=-0.3955;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:26.85:0,27,391	0/1:4,0:4:22.10:44,0,22	0/0:22,0:6:18.05:0,18,235	0/0:23,0:12:33.11:0,33,505	0/1:11,0:11:93:93,0,317	0/0:4,0:3:3.01:0,3,52	0/0:6,0:6:15.05:0,15,322	0/0:25,0:21:12.72:0,13,585	0/0:9,0:9:27.08:0,27,638	0/1:6,0:6:4.78:5,0,89	0/1:10,0:9:29.81:30,0,205	0/0:9,0:9:27.09:0,27,651	0/1:6,2:8:40.94:90,0,41	0/1:4,5:9:22.48:173,0,22	0/1:12,0:11:33.31:33,0,312	0/0:13,0:13:36.11:0,36,853	0/0:11,0:11:13.60:0,14,273	0/0:3,0:3:4.15:0,4,77	0/0:15,0:13:29.45:0,29,443	0/1:10,0:10:30.21:30,0,251	0/1:7,0:7:22.18:22,0,119	0/0:6,0:6:14.85:0,15,248	0/0:8,0:8:21.05:0,21,470	0/0:16,0:16:45.15:0,45,1130	0/1:10,0:10:31.84:32,0,239	0/0:5,0:5:10.57:0,11,152	0/1:18,0:17:73.28:73,0,244	0/0:5,0:5:15.05:0,15,247
chr10	80198690	.	C	CCACCACCACCACCACCAACAA	7954.36	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=5.954;DP=319;FS=26.551;HRun=0;HaplotypeScore=173.4706;InbreedingCoeff=0.8253;MQ=47.69;MQ0=14;MQRankSum=-7.418;QD=50.34;ReadPosRankSum=-0.145;VQSLOD=2.6135;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:50.53:0,51,1129	1/1:4,0:4:12.04:202,12,0	0/0:20,0:6:17.27:0,17,290	0/0:23,0:12:33.09:0,33,654	1/1:12,0:12:33.04:838,33,0	1/1:1,3:7:3.01:301,3,0	0/0:6,0:6:15.05:0,15,515	1/1:24,0:20:54.09:943,54,0	0/0:9,0:9:27.08:0,27,1163	1/1:7,0:7:18.03:239,18,0	1/1:10,0:9:23.99:573,24,0	0/0:9,0:9:27.09:0,27,1000	0/0:8,0:8:11.21:0,11,347	0/0:9,0:9:13.88:0,14,539	1/1:12,0:11:30.10:817,30,0	0/0:13,0:13:33.11:0,33,1458	1/1:9,0:9:17.93:403,18,0	1/1:3,0:3:9.03:155,9,0	0/1:15,0:13:3.26:756,0,3	1/1:10,0:10:30.08:618,30,0	0/1:7,0:7:4.25:131,0,4	0/0:8,0:8:14.20:0,14,273	0/0:11,0:11:21.10:0,21,792	0/0:16,0:16:45.13:0,45,1759	1/1:10,0:10:30.10:630,30,0	1/1:4,0:4:6.74:292,7,0	1/1:18,0:17:39.12:985,39,0	1/1:5,0:5:9.39:72,9,0
chr10	80198926	.	TC	T	1180.76	PASS	AB=0.548;AC=5;AF=0.089;AN=56;BaseQRankSum=5.509;DP=319;FS=5.620;HRun=1;HaplotypeScore=37.4480;InbreedingCoeff=0.7100;MQ=67.56;MQ0=0;MQRankSum=-1.716;QD=31.07;ReadPosRankSum=0.608;VQSLOD=2.9779;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:30.10:0,30,479	0/0:4,0:4:12.04:0,12,192	0/0:10,0:9:21.02:0,21,269	0/0:11,0:11:11.28:0,11,325	0/0:19,0:19:57.19:0,57,897	1/1:0,11:11:27.09:378,27,0	0/0:14,0:14:39.13:0,39,620	0/0:23,0:23:69.22:0,69,1062	0/0:9,0:9:27.09:0,27,431	0/0:11,0:11:33.11:0,33,515	0/0:10,0:10:24.08:0,24,382	0/0:10,0:10:30.10:0,30,477	0/0:11,0:11:33.11:0,33,527	0/0:12,0:12:33.11:0,33,526	0/0:10,0:10:30.09:0,30,456	0/0:9,0:9:27.09:0,27,431	0/0:19,0:19:57.18:0,57,877	0/0:10,0:10:30.08:0,30,454	0/0:14,0:14:42.14:0,42,672	0/0:19,0:19:57.17:0,57,855	0/0:3,0:3:9.03:0,9,144	0/0:3,0:3:9.03:0,9,144	0/0:7,0:7:21.07:0,21,333	0/0:5,0:5:15.05:0,15,239	0/0:8,0:8:24.08:0,24,383	0/1:3,14:17:44.81:555,0,45	0/0:19,0:19:54.15:0,54,813	1/1:0,10:10:27.56:377,28,0
chr10	80198940	.	GA	G	746.91	PASS	AB=0.788;AC=8;AF=0.143;AN=56;BaseQRankSum=8.734;DP=320;FS=0.000;HRun=8;HaplotypeScore=41.8694;InbreedingCoeff=0.7901;MQ=75.21;MQ0=0;MQRankSum=-2.253;QD=12.05;ReadPosRankSum=2.066;VQSLOD=1.7699;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:10:1.43:84,0,1	0/0:6,0:6:18.06:0,18,217	0/0:12,1:12:23.07:0,23,223	0/0:8,0:8:20.97:0,21,206	0/0:17,0:17:48.15:0,48,578	0/0:10,0:10:24.07:0,24,290	0/0:11,0:11:27.07:0,27,315	0/0:22,0:22:57.17:0,57,679	0/0:11,0:11:33.07:0,33,375	0/0:11,0:11:27.08:0,27,326	0/0:10,0:10:21.02:0,21,237	0/0:9,0:9:24.07:0,24,290	1/1:13,0:13:31.68:167,32,0	1/1:14,0:14:34.52:192,35,0	0/0:10,0:10:27.08:0,27,326	0/0:8,0:8:24.07:0,24,290	0/0:19,0:19:48.15:0,48,580	0/0:10,0:10:21.06:0,21,254	0/0:20,0:20:48.15:0,48,580	0/0:18,0:18:51.16:0,51,616	0/0:4,0:4:12.04:0,12,145	0/0:2,0:2:6.02:0,6,71	0/0:8,0:8:21.06:0,21,254	0/0:3,0:3:6.02:0,6,72	0/0:8,0:8:21.06:0,21,252	0/1:4,11:15:0.19:283,0,0	0/0:20,0:20:54.17:0,54,652	1/1:4,6:10:18.03:174,18,0
chr10	80198948	.	AT	A	1189.70	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=7.472;DP=314;FS=1.254;HRun=1;HaplotypeScore=39.0487;InbreedingCoeff=0.7917;MQ=79.45;MQ0=0;MQRankSum=-1.592;QD=20.51;ReadPosRankSum=3.049;VQSLOD=3.8932;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:21.07:292,21,0	0/0:6,0:6:18.06:0,18,256	0/0:14,0:13:8.86:0,9,291	0/0:9,0:9:26.03:0,26,290	0/0:16,0:16:48.14:0,48,661	0/0:9,0:9:24.08:0,24,343	0/0:8,0:8:24.08:0,24,343	0/0:21,0:21:60.19:0,60,837	0/0:12,0:12:36.09:0,36,473	0/0:10,0:10:30.09:0,30,411	0/0:9,0:9:27.06:0,27,340	0/0:12,0:12:36.07:0,36,443	1/1:0,13:13:33.11:460,33,0	1/1:0,15:15:36.12:492,36,0	0/0:10,0:10:30.08:0,30,410	0/0:9,0:9:27.08:0,27,368	0/0:18,0:18:54.14:0,54,731	0/0:10,0:10:30.01:0,30,365	0/0:21,0:21:63.15:0,63,808	0/0:17,0:17:51.17:0,51,726	0/0:4,0:4:12.04:0,12,171	0/0:2,0:2:5.99:0,6,65	0/0:8,0:8:24.07:0,24,322	0/0:2,0:2:6.02:0,6,86	0/0:7,0:7:21.04:0,21,277	0/1:15,0:15:46.73:47,0,66	0/0:22,0:22:64.38:0,64,841	1/1:6,0:6:15.66:61,16,0
chr10	80205910	.	A	AAGGGG	4297.12	PASS	AC=34;AF=0.944;AN=36;BaseQRankSum=-1.732;DP=125;FS=17.404;HRun=0;HaplotypeScore=15.2802;InbreedingCoeff=0.2334;MQ=23.45;MQ0=43;MQRankSum=-0.094;QD=46.71;ReadPosRankSum=0.976;VQSLOD=2.7640;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:1:3:0,3,25	./.	./.	./.	1/1:2,2:3:6.02:181,6,0	1/1:1,3:5:9.03:271,9,0	1/1:2,2:2:6.02:181,6,0	1/1:2,4:7:9:153,9,0	1/1:1,2:4:6.02:180,6,0	1/1:3,6:8:24.04:601,24,0	1/1:3,2:3:6.02:126,6,0	1/1:3,3:6:9.03:266,9,0	./.	./.	1/1:1,1:1:3.01:90,3,0	./.	1/1:2,1:3:6.02:125,6,0	./.	./.	1/1:1,6:7:21.07:578,21,0	1/1:5,1:1:3.01:90,3,0	1/1:1,2:5:6.02:180,6,0	./.	./.	1/1:2,4:6:15:381,15,0	1/1:3,2:4:12:259,12,0	1/1:0,3:3:9.03:271,9,0	1/1:3,4:4:12.04:362,12,0
chr10	80205989	.	T	TA	719.10	PASS	AC=6;AF=0.120;AN=50;BaseQRankSum=-6.645;DP=248;FS=5.070;HRun=10;HaplotypeScore=42.3684;InbreedingCoeff=0.7212;MQ=54.93;MQ0=29;MQRankSum=2.351;QD=21.15;ReadPosRankSum=1.080;VQSLOD=4.4909;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:0,0:2:5.60:0,6,26	0/0:6,0:3:2.68:0,3,22	0/0:13,0:9:5.44:0,5,67	0/0:9,0:9:18.14:0,18,68	1/1:2,7:9:21.05:224,21,0	0/0:18,0:15:23.94:0,24,197	0/0:9,0:10:12.36:0,12,57	0/0:6,0:6:11.98:0,12,98	0/0:10,0:11:17.49:0,17,56	0/0:9,0:10:22.84:0,23,84	0/0:6,0:5:8.99:0,9,74	./.	./.	0/0:4,0:3:6.11:0,6,17	0/0:4,0:3:8.99:0,9,74	0/0:9,0:9:16.85:0,17,51	0/0:10,0:6:10.37:0,10,30	0/0:11,0:9:16.72:0,17,53	0/0:5,0:11:23.49:0,23,90	0/0:7,0:5:10.18:0,10,43	0/0:8,0:8:17.98:0,18,147	0/0:16,0:16:41.94:0,42,345	0/0:8,0:8:20.98:0,21,172	0/0:3,0:5:6.87:0,7,25	1/1:4,15:17:45.09:470,45,0	0/0:7,0:9:15.61:0,16,53	1/1:1,5:5:15.04:160,15,0
chr10	80206001	.	C	CA	3100.59	PASS	AB=0.917;AC=26;AF=0.520;AN=50;BaseQRankSum=0.941;DP=244;FS=11.965;HRun=8;HaplotypeScore=38.2221;InbreedingCoeff=0.7937;MQ=64.81;MQ0=11;MQRankSum=-1.912;QD=22.47;ReadPosRankSum=-1.274;VQSLOD=2.2679;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,2:2:6:54,6,0	0/1:8,0:5:21.63:22,0,44	0/0:16,0:12:22.87:0,23,181	1/1:9,4:13:33.06:366,33,0	0/0:9,0:9:23.99:0,24,218	0/0:11,0:10:30.02:0,30,274	1/1:11,7:16:23.90:248,24,0	0/0:5,0:5:12:0,12,110	1/1:8,1:9:24.07:268,24,0	1/1:10,4:12:33.06:354,33,0	0/0:5,0:5:11.99:0,12,105	./.	./.	1/1:3,1:4:12.04:139,12,0	0/0:4,0:3:9:0,9,82	1/1:10,0:10:27.08:308,27,0	1/1:8,1:6:18.05:207,18,0	1/1:9,10:15:42.12:477,42,0	1/1:5,7:12:33.07:349,33,0	0/1:4,1:5:12.38:116,0,12	0/0:9,0:9:21.01:0,21,192	0/0:16,0:16:45.02:0,45,412	0/0:8,0:8:21.01:0,21,192	1/1:3,3:6:12.03:131,12,0	0/0:17,0:16:42.01:0,42,383	1/1:6,3:9:24.06:264,24,0	0/0:5,0:5:15.01:0,15,136
chr10	80206132	.	CA	C	1851.15	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.694;DP=473;FS=13.474;HRun=5;HaplotypeScore=52.2135;InbreedingCoeff=0.9752;MQ=67.25;MQ0=4;MQRankSum=-1.940;QD=25.71;ReadPosRankSum=1.937;VQSLOD=2.1551;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,31:35:84.22:941,84,0	0/0:3,0:3:9.03:0,9,123	0/0:15,0:12:26.12:0,26,375	0/0:18,0:16:42.07:0,42,525	0/0:16,0:15:42.13:0,42,559	0/0:12,0:12:36.12:0,36,492	0/0:22,0:22:54.18:0,54,737	0/0:23,0:23:66.20:0,66,861	0/0:11,0:11:27.08:0,27,353	0/0:21,0:21:57.15:0,57,758	0/0:12,0:12:36.12:0,36,492	0/0:12,0:12:36.12:0,36,492	1/1:0,20:20:51.15:578,51,0	1/1:2,15:17:42.12:475,42,0	0/0:14,0:14:42.10:0,42,553	0/0:9,0:9:27.08:0,27,355	0/0:30,0:29:69.20:0,69,924	0/0:17,0:16:45.08:0,45,592	0/0:21,0:20:60.19:0,60,807	0/0:13,0:13:39.12:0,39,517	0/0:24,0:24:72.23:0,72,969	0/0:10,0:10:30.09:0,30,394	0/0:15,0:15:42.10:0,42,553	0/0:16,0:16:45.15:0,45,614	0/0:12,0:12:36.11:0,36,476	0/0:23,0:23:66.22:0,66,903	0/0:25,0:25:63.20:0,63,845	0/0:6,0:6:18.03:0,18,213
chr10	80207851	.	AAAATAAATAAAT	A	2149.85	PASS	AB=0.775;AC=18;AF=0.474;AN=38;BaseQRankSum=0.897;DP=220;FS=7.160;HRun=0;HaplotypeScore=69.3517;InbreedingCoeff=0.4745;MQ=48.82;MQ0=6;MQRankSum=-3.704;QD=20.47;ReadPosRankSum=-3.260;VQSLOD=0.1940;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:6.02:0,6,350	1/1:3,1:4:3.01:103,3,0	./.	./.	1/1:3,6:9:12.01:330,12,0	0/0:7,0:12:15.05:0,15,407	./.	1/1:22,0:19:3.01:40,3,0	0/0:2,0:2:3.01:0,3,78	./.	0/0:5,0:5:3.01:0,3,43	0/0:4,0:7:6.02:0,6,299	0/0:5,0:8:12.04:0,12,505	./.	1/1:1,4:4:6.02:206,6,0	./.	1/1:9,6:14:11.91:381,12,0	0/1:8,4:10:6.16:297,0,6	0/1:9,3:9:33.39:214,0,33	1/1:3,2:5:6.02:206,6,0	./.	./.	0/0:4,0:4:3.01:0,3,157	./.	1/1:6,7:11:12.04:412,12,0	0/0:2,0:5:9.03:0,9,447	1/1:7,1:6:3.01:103,3,0	0/0:16,0:21:39.13:0,39,1812
chr10	80208308	.	T	TTA	255.23	PASS	AB=0.563;AC=1;AF=0.019;AN=54;BaseQRankSum=3.464;DP=234;FS=3.322;HRun=0;HaplotypeScore=30.4741;InbreedingCoeff=-0.0080;MQ=74.43;MQ0=0;MQRankSum=-1.718;QD=28.36;ReadPosRankSum=1.370;VQSLOD=4.2182;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:2,7:9:14.52:329,0,15	0/0:1,0:1:3.01:0,3,39	0/0:5,0:4:2.36:0,2,8	0/0:15,0:10:8.61:0,9,78	0/0:13,0:13:30.10:0,30,386	0/0:12,0:12:30.10:0,30,385	0/0:4,0:4:9.03:0,9,116	0/0:39,0:39:99:0,99,1262	0/0:4,0:4:6.02:0,6,76	0/0:4,0:4:6.02:0,6,77	0/0:6,0:6:9.03:0,9,116	0/0:1,0:1:3.01:0,3,39	0/0:12,0:12:24.08:0,24,309	0/0:8,0:8:21.07:0,21,270	0/0:4,0:4:12.04:0,12,154	0/0:7,0:7:3:0,3,25	0/0:9,0:9:21.07:0,21,270	0/0:10,0:10:24.04:0,24,291	0/0:14,0:14:33.09:0,33,400	0/0:5,0:5:15.04:0,15,179	0/0:7,0:7:18.04:0,18,215	./.	0/0:7,0:7:15.02:0,15,165	0/0:2,0:2:6.02:0,6,77	0/0:8,0:8:15.04:0,15,180	0/0:6,0:6:18.06:0,18,230	0/0:15,0:15:30.08:0,30,372	0/0:5,0:5:9.03:0,9,114
chr10	80209056	.	CTCCTCT	C	1706.41	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.142;DP=575;FS=10.590;HRun=0;HaplotypeScore=127.3570;InbreedingCoeff=0.9548;MQ=63.25;MQ0=1;MQRankSum=-7.797;QD=27.09;ReadPosRankSum=2.630;VQSLOD=3.0035;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,9:20:8.95:165,9,0	0/0:5,0:5:9.03:0,9,286	0/0:22,0:20:33.10:0,33,870	0/0:30,0:20:34.41:0,34,700	0/0:35,0:35:84.25:0,84,2609	0/0:19,0:19:47.65:0,48,1465	0/0:13,0:13:30.09:0,30,924	0/0:29,0:29:60.19:0,60,1729	0/0:23,0:23:60.18:0,60,1804	0/0:15,0:15:30.10:0,30,970	0/0:29,0:29:66.23:0,66,1995	0/0:9,0:9:27.09:0,27,906	1/1:1,25:26:53.92:1162,54,0	1/1:4,13:17:24.08:516,24,0	0/0:18,0:18:51.18:0,51,1612	0/0:14,0:14:30.09:0,30,751	0/0:16,0:16:27.31:0,27,882	0/0:11,0:11:27.03:0,27,745	0/0:12,0:12:27.09:0,27,825	0/0:43,0:43:99:0,105,3305	0/0:17,0:17:42.10:0,42,1170	0/0:23,0:23:51.12:0,51,1468	0/0:20,0:20:54.19:0,54,1743	0/0:12,0:12:27.09:0,27,878	0/0:28,0:28:75.24:0,75,2410	0/0:27,0:27:63.22:0,63,2063	0/0:28,0:28:63.20:0,63,2025	0/0:13,0:13:30.10:0,30,924
chr10	80209174	.	TG	T	10044.03	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=2.440;DP=499;FS=24.549;HRun=1;HaplotypeScore=59.8009;InbreedingCoeff=0.9830;MQ=86.58;MQ0=0;MQRankSum=-0.784;QD=39.86;ReadPosRankSum=1.679;VQSLOD=2.8667;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:41.99:0,42,587	1/1:0,9:9:27.09:378,27,0	0/0:16,0:16:48.16:0,48,746	0/0:18,0:18:54.18:0,54,856	1/1:0,28:28:75.25:1046,75,0	0/0:14,0:14:42.14:0,42,671	0/0:13,0:13:39.12:0,39,589	1/1:0,31:31:93.29:1269,93,0	0/0:16,0:16:48.16:0,48,767	1/1:0,27:27:81.26:1117,81,0	1/1:0,27:27:69.23:964,69,0	0/0:9,0:9:27.09:0,27,429	0/0:26,0:26:75.24:0,75,1171	0/0:15,0:15:42.13:0,42,646	1/1:0,19:19:57.19:797,57,0	0/0:13,0:13:39.13:0,39,621	1/1:0,9:9:27.09:376,27,0	1/1:0,10:10:30.10:419,30,0	1/1:0,21:21:63.16:826,63,0	1/1:0,20:20:60.20:839,60,0	1/1:0,3:3:6.02:84,6,0	0/0:21,0:21:63.21:0,63,1006	0/0:22,0:22:53.84:0,54,854	0/0:17,0:17:51.17:0,51,815	1/1:0,14:14:42.14:587,42,0	0/0:18,1:19:15.25:0,15,821	1/1:0,34:34:96.32:1342,96,0	0/0:12,0:12:36.10:0,36,539
chr10	80212239	.	T	TA	5154.27	PASS	AC=32;AF=0.640;AN=50;BaseQRankSum=1.443;DP=291;FS=26.025;HRun=9;HaplotypeScore=39.7738;InbreedingCoeff=0.9667;MQ=64.90;MQ0=4;MQRankSum=-0.387;QD=25.77;ReadPosRankSum=0.130;VQSLOD=3.1778;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,5:5:12.03:133,12,0	0/0:12,0:9:23.67:0,24,193	0/0:8,0:8:20.19:0,20,162	1/1:4,12:16:33.09:365,33,0	1/1:2,7:9:18.05:199,18,0	0/0:5,0:5:15:0,15,130	1/1:8,17:25:51.14:564,51,0	0/0:13,0:12:29.98:0,30,260	1/1:6,19:25:57.15:631,57,0	1/1:0,14:14:42.11:465,42,0	0/0:4,0:4:12:0,12,104	./.	./.	1/1:1,8:8:21.06:232,21,0	0/0:7,0:7:18:0,18,156	1/1:0,10:11:27.07:299,27,0	1/1:3,3:6:8.99:87,9,0	1/1:4,11:15:36.08:385,36,0	1/1:1,11:12:30.08:332,30,0	1/1:3,10:12:28.32:302,28,0	0/0:10,0:10:29.99:0,30,260	0/0:12,0:11:29.98:0,30,260	0/0:18,0:18:44.99:0,45,391	1/1:2,11:12:33.09:365,33,0	1/1:1,12:12:36.10:398,36,0	1/1:1,8:9:24.06:265,24,0	1/1:0,5:5:12.03:133,12,0
chr10	80212330	.	CA	C	1758.48	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.648;DP=408;FS=23.833;HRun=6;HaplotypeScore=55.9855;InbreedingCoeff=0.9798;MQ=77.21;MQ0=0;MQRankSum=-3.574;QD=27.91;ReadPosRankSum=3.546;VQSLOD=1.9083;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:57.14:613,57,0	0/0:10,0:10:30.10:0,30,394	0/0:11,0:11:27.08:0,27,333	0/0:10,0:10:21.06:0,21,260	0/0:19,0:19:54.18:0,54,707	0/0:18,0:18:51.16:0,51,657	0/0:10,0:10:24.07:0,24,303	0/0:24,0:24:63.19:0,63,815	0/0:19,0:19:51.12:0,51,649	0/0:14,0:14:33.09:0,33,409	0/0:19,0:19:48.16:0,48,631	0/0:6,0:6:18.06:0,18,231	1/1:1,21:22:63.16:677,63,0	1/1:1,19:20:57.14:612,57,0	0/0:12,0:12:33.06:0,33,403	0/0:11,0:11:30.10:0,30,392	0/0:12,0:12:33.11:0,33,434	0/0:21,0:21:51.17:0,51,669	0/0:23,0:23:60.15:0,60,758	0/0:14,0:14:39.13:0,39,513	0/0:6,0:6:12.04:0,12,158	0/0:9,0:9:21.07:0,21,276	0/0:11,0:11:27.09:0,27,355	0/0:10,0:10:30.10:0,30,395	0/0:12,0:12:36.10:0,36,458	0/0:9,0:9:21.06:0,21,264	0/0:17,0:17:48.15:0,48,618	0/0:18,0:18:45.15:0,45,592
chr10	80212836	.	GAACA	G	11184.02	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=10.746;DP=589;FS=0.326;HRun=0;HaplotypeScore=121.6872;InbreedingCoeff=0.9981;MQ=71.65;MQ0=0;MQRankSum=-4.768;QD=40.67;ReadPosRankSum=1.519;VQSLOD=5.2678;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:48.16:0,48,1185	1/1:2,10:12:23.83:417,24,0	0/0:16,0:16:42.14:0,42,966	0/0:17,0:17:42.12:0,42,912	1/1:2,33:35:90.31:1559,90,0	0/0:27,0:27:66.23:0,66,1672	0/0:16,0:16:33.11:0,33,838	1/1:4,12:16:36.11:594,36,0	0/0:21,0:21:57.20:0,57,1419	1/1:6,27:33:81.26:1381,81,0	1/1:3,21:24:57.19:989,57,0	0/0:17,0:17:45.15:0,45,1139	0/0:28,0:28:78.25:0,78,1926	0/0:19,0:19:57.20:0,57,1444	1/1:0,23:23:63.22:1096,63,0	0/0:12,0:12:33.11:0,33,837	1/1:1,7:8:18.06:313,18,0	1/1:4,9:13:24.08:417,24,0	1/1:5,12:17:36.11:589,36,0	1/1:1,27:28:72.25:1252,72,0	1/1:2,14:16:30.06:490,30,0	0/0:23,0:23:66.21:0,66,1529	0/0:37,0:37:99:0,102,2565	0/0:15,0:15:36.12:0,36,914	1/1:4,13:17:36.12:626,36,0	0/0:29,0:29:75.26:0,75,1880	1/1:4,29:33:84.29:1461,84,0	0/0:17,0:17:48.16:0,48,1219
chr10	80216313	.	A	AAC	1466.25	PASS	AB=0.905;AC=21;AF=0.420;AN=50;BaseQRankSum=-5.020;DP=476;FS=2.623;HRun=0;HaplotypeScore=87.4956;InbreedingCoeff=0.4878;MQ=64.97;MQ0=9;MQRankSum=1.732;QD=6.11;ReadPosRankSum=-1.580;VQSLOD=3.0279;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:14.70:0,15,125	1/1:5,4:9:1.78:164,2,0	./.	./.	0/1:21,9:29:68.30:192,0,68	0/0:7,0:11:11.40:0,11,57	0/1:14,0:15:27.37:27,0,87	0/1:18,0:17:0:0,0,0	0/0:12,0:13:26.73:0,27,250	1/1:6,2:8:10.27:118,10,0	1/1:8,10:18:6.72:195,7,0	0/0:10,0:10:8.98:0,9,85	./.	0/0:12,0:21:16.82:0,17,80	1/1:2,5:7:3.01:44,3,0	0/0:10,0:12:23.73:0,24,220	0/0:13,0:15:14.87:0,15,142	1/1:19,2:22:9.03:133,9,0	0/1:16,4:20:86.93:88,0,87	1/1:7,8:16:12.04:158,12,0	0/1:18,0:19:17.37:97,0,17	0/0:10,0:12:17.74:0,18,142	0/0:9,0:17:13.89:0,14,66	0/0:13,0:13:11.86:0,12,110	1/1:29,2:34:31.04:333,31,0	0/0:13,0:21:17.04:0,17,83	1/1:13,5:19:5.89:89,6,0	0/0:6,0:10:11.36:0,11,56
chr10	80217706	.	C	CT	1781	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.524;DP=659;FS=21.292;HRun=4;HaplotypeScore=74.6455;InbreedingCoeff=0.9987;MQ=84.08;MQ0=0;MQRankSum=-2.758;QD=28.27;ReadPosRankSum=1.491;VQSLOD=1.9584;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,10:15:33.06:409,33,0	0/0:8,0:8:24.07:0,24,272	0/0:20,0:20:51.04:0,51,549	0/0:21,0:21:45.10:0,45,493	0/0:41,0:41:99:0,111,1259	0/0:37,0:37:99:0,111,1256	0/0:13,0:13:39.11:0,39,442	0/0:35,0:35:99:0,99,1098	0/0:18,0:18:54.15:0,54,612	0/0:27,0:27:78.22:0,78,885	0/0:25,0:25:66.17:0,66,737	0/0:10,0:10:27.08:0,27,306	1/1:1,18:19:54.18:700,54,0	1/1:2,27:29:63.20:815,63,0	0/0:36,0:36:99:0,105,1191	0/0:22,0:22:60.17:0,60,679	0/0:22,0:21:66.16:0,66,729	0/0:15,0:15:42.12:0,42,476	0/0:29,0:29:84.24:0,84,952	0/0:39,0:39:99:0,108,1204	0/0:18,0:18:48.13:0,48,545	0/0:25,0:25:72.19:0,72,807	0/0:21,0:21:63.18:0,63,715	0/0:17,0:17:45.11:0,45,500	0/0:21,0:21:60.17:0,60,680	0/0:27,0:27:78.18:0,78,856	0/0:36,0:36:90.26:0,90,1021	0/0:13,0:13:39.11:0,39,442
chr10	80217744	.	T	TTA	523.27	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.755;DP=657;FS=0.000;HRun=0;HaplotypeScore=89.0366;InbreedingCoeff=0.9972;MQ=80.26;MQ0=1;MQRankSum=-3.247;QD=27.54;ReadPosRankSum=-0.780;VQSLOD=4.5512;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,15:18:35.95:618,36,0	0/0:11,0:11:33.10:0,33,455	0/0:26,0:26:51.59:0,52,881	0/0:21,0:21:54.13:0,54,724	0/0:36,0:36:99:0,105,1470	0/0:39,0:39:99:0,111,1547	0/0:11,0:11:33.09:0,33,454	0/0:29,0:29:78.26:0,78,1098	0/0:14,0:14:42.14:0,42,598	0/0:31,0:31:84.28:0,84,1195	0/0:29,0:29:84.28:0,84,1193	0/0:8,0:8:24.08:0,24,344	0/0:22,0:22:66.21:0,66,925	0/0:22,0:22:63.21:0,63,898	0/0:32,0:32:90.30:0,90,1285	0/0:24,0:24:69.21:0,69,949	0/0:19,0:19:54.16:0,54,748	0/0:13,0:13:39.13:0,39,559	0/0:28,0:28:84.20:0,84,1149	0/0:40,0:39:99:0,114,1611	0/0:27,0:27:78.26:0,78,1118	0/0:31,0:31:84.28:0,84,1200	0/0:25,0:25:72.24:0,72,1030	0/0:19,0:19:54.18:0,54,774	0/0:16,0:16:45.15:0,45,645	0/0:25,0:25:72.24:0,72,1025	0/0:23,0:23:66.21:0,66,922	0/0:17,0:17:51.17:0,51,731
chr10	80218386	.	G	GT	1497.56	PASS	AB=0.895;AC=7;AF=0.125;AN=56;BaseQRankSum=-7.702;DP=562;FS=2.379;HRun=9;HaplotypeScore=52.5963;InbreedingCoeff=0.8112;MQ=77.62;MQ0=0;MQRankSum=-2.608;QD=17.62;ReadPosRankSum=1.411;VQSLOD=3.8034;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:49.15:770,49,0	0/0:8,0:8:20.98:0,21,182	0/0:22,0:19:8.04:0,8,201	0/0:9,0:8:14.97:0,15,124	0/0:27,1:28:41.80:0,42,592	0/0:26,0:26:65.98:0,66,573	0/0:15,0:15:32.99:0,33,287	0/0:29,0:29:62.91:0,63,531	0/0:18,0:18:50.98:0,51,443	0/0:25,0:25:62.95:0,63,543	0/0:25,0:26:68:0,68,579	0/0:16,0:16:38.98:0,39,339	1/1:4,18:22:42.09:453,42,0	1/1:1,15:16:16.09:405,16,0	0/0:18,0:18:47.98:0,48,416	0/0:13,0:13:35.99:0,36,312	0/0:14,0:14:38.98:0,39,339	0/0:33,0:33:83.96:0,84,729	0/0:26,0:26:68.98:0,69,598	0/0:20,0:20:56.99:0,57,495	0/0:19,0:19:50.99:0,51,443	0/1:15,2:17:15.25:15,0,340	0/0:16,0:16:47.99:0,48,417	0/0:13,0:13:32.98:0,33,286	0/0:23,1:24:32.80:0,33,514	0/0:27,0:27:68.97:0,69,596	0/0:23,0:23:33.48:0,33,445	0/0:9,0:9:26.99:0,27,234
chr10	80219389	.	GT	G	1127.26	PASS	AB=0.748;AC=25;AF=0.446;AN=56;BaseQRankSum=2.473;DP=562;FS=4.000;HRun=17;HaplotypeScore=87.2733;InbreedingCoeff=0.0681;MQ=67.36;MQ0=1;MQRankSum=0.854;QD=3.08;ReadPosRankSum=3.705;VQSLOD=0.1421;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:17.41:0,17,82	1/1:4,4:8:11.57:67,12,0	0/0:28,0:16:14.38:0,14,88	0/1:17,2:13:12.03:12,0,68	0/1:12,16:29:13.51:119,0,14	0/1:7,0:18:3.52:26,0,4	0/1:19,2:21:13.38:13,0,111	0/1:17,11:30:31.32:126,0,31	0/1:18,1:20:1.74:2,0,203	0/0:15,1:18:7.04:0,7,141	0/0:19,1:20:21.94:0,22,247	0/0:18,2:19:2.22:0,2,182	0/0:12,0:11:11.23:0,11,55	0/0:16,0:15:8.31:0,8,38	1/1:9,4:17:25.20:116,25,0	0/0:21,1:24:8.37:0,8,207	0/1:10,15:28:10:180,0,10	0/1:11,2:17:18:18,0,51	0/1:9,6:14:4.52:78,0,5	1/1:7,5:13:24.14:121,24,0	1/1:13,3:16:12.51:61,13,0	0/1:11,2:15:12.93:30,0,13	0/1:14,4:19:33.33:33,0,56	0/0:25,5:30:12.54:0,13,366	0/1:13,6:22:33.62:102,0,34	1/1:5,1:15:19.10:63,19,0	0/1:22,12:33:99:115,0,111	1/1:2,0:6:8.06:23,8,0
chr10	80219393	.	T	TTTTTTTGTTTTT	2933.16	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.336;DP=572;FS=18.642;HRun=0;HaplotypeScore=224.8673;InbreedingCoeff=0.9165;MQ=66.90;MQ0=1;MQRankSum=-5.632;QD=47.31;ReadPosRankSum=-1.672;VQSLOD=1.8627;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:26:54.17:1680,54,0	0/0:8,0:8:21.02:0,21,434	0/0:30,0:16:16.21:0,16,271	0/0:19,0:13:8.40:0,8,441	0/0:32,0:32:53.25:0,53,1104	0/0:19,0:19:26.48:0,26,577	0/0:19,0:18:32.57:0,33,615	0/0:26,0:26:59.43:0,59,1407	0/0:21,0:21:41.48:0,41,821	0/0:17,0:17:28.96:0,29,684	0/0:21,0:21:41.75:0,42,782	0/0:21,0:20:23.47:0,23,580	1/1:9,0:12:26.82:953,27,0	1/1:4,8:21:8.59:436,9,0	0/0:19,0:19:43.61:0,44,857	0/0:22,0:22:47.70:0,48,1011	0/0:31,0:30:65.97:0,66,1730	0/0:18,0:17:33.37:0,33,722	0/0:16,0:15:34.76:0,35,626	0/0:12,0:12:28.61:0,29,636	0/0:17,0:16:29.83:0,30,513	0/0:15,0:15:7.98:0,8,410	0/0:18,0:18:43.79:0,44,774	0/0:30,0:30:64.70:0,65,1655	0/0:24,0:24:46.87:0,47,1043	0/0:15,0:15:33.06:0,33,754	0/0:33,0:32:74.33:0,74,1494	0/0:7,0:7:14.98:0,15,377
chr10	80219763	.	AT	A	2350.61	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.966;DP=535;FS=32.078;HRun=2;HaplotypeScore=56.0306;InbreedingCoeff=0.9211;MQ=81.11;MQ0=0;MQRankSum=0.942;QD=31.77;ReadPosRankSum=1.897;VQSLOD=1.6038;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:75.24:974,75,0	0/0:5,0:5:15.05:0,15,225	0/0:13,0:14:5.95:0,6,230	0/0:13,0:13:5.57:0,6,260	0/0:20,0:20:57.19:0,57,854	0/0:17,0:17:48.16:0,48,719	0/0:19,0:19:54.17:0,54,788	0/0:25,0:25:75.25:0,75,1125	0/0:15,0:15:45.14:0,45,652	0/0:19,0:19:57.19:0,57,855	0/0:18,0:18:54.17:0,54,788	0/0:21,0:21:63.21:0,63,943	1/1:1,23:24:63.20:818,63,0	1/1:1,20:21:54.18:701,54,0	0/0:19,0:19:54.18:0,54,809	0/0:14,0:14:42.13:0,42,610	0/0:19,0:19:57.19:0,57,854	0/0:25,0:25:72.24:0,72,1079	0/0:15,0:15:45.14:0,45,656	0/0:17,0:17:51.17:0,51,764	0/0:29,0:29:81.23:0,81,1214	0/0:18,0:18:51.17:0,51,763	0/0:22,0:22:57.19:0,57,854	0/0:26,0:26:78.26:0,78,1169	0/0:23,0:23:69.23:0,69,1031	0/0:18,0:18:54.18:0,54,809	0/0:17,0:17:51.17:0,51,763	0/0:13,0:13:39.13:0,39,584
chr10	80221020	.	CA	C	7947.52	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=14.247;DP=522;FS=6.312;HRun=4;HaplotypeScore=52.2525;InbreedingCoeff=0.9655;MQ=84.14;MQ0=0;MQRankSum=-4.656;QD=32.31;ReadPosRankSum=-0.087;VQSLOD=5.0153;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.23:0,69,966	1/1:0,8:8:24.07:288,24,0	0/0:17,0:17:46.90:0,47,585	0/0:14,0:14:2.56:0,3,248	1/1:2,20:22:54.13:633,54,0	0/0:21,0:21:57.18:0,57,779	0/0:13,0:13:39.12:0,39,529	1/1:1,30:31:90.28:1080,90,0	0/0:14,0:14:39.13:0,39,546	1/1:0,30:30:90.23:1045,90,0	1/1:0,15:15:39.12:468,39,0	0/0:17,0:17:45.15:0,45,627	0/0:15,0:15:45.15:0,45,629	0/0:23,0:23:69.20:0,69,931	1/1:0,19:19:57.17:684,57,0	0/0:21,0:21:63.20:0,63,867	1/1:1,13:14:33.10:396,33,0	1/1:0,3:3:9.03:108,9,0	1/1:3,24:27:72.22:864,72,0	1/1:1,28:29:69.14:798,69,0	1/1:1,13:14:39.12:468,39,0	0/0:27,0:27:78.25:0,78,1077	0/0:19,0:19:51.15:0,51,683	0/0:11,0:11:30.08:0,30,387	1/1:1,23:24:69.21:828,69,0	0/0:20,1:21:24.16:0,24,728	1/1:1,9:10:24.07:288,24,0	0/0:18,0:18:54.18:0,54,756
chr10	80224638	.	C	CT	2119.17	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.465;DP=525;FS=2.372;HRun=6;HaplotypeScore=47.0018;InbreedingCoeff=0.9844;MQ=83.87;MQ0=0;MQRankSum=-3.825;QD=30.27;ReadPosRankSum=1.526;VQSLOD=4.1938;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:29:72.23:903,72,0	0/0:7,0:7:18.04:0,18,183	0/0:17,0:17:39.07:0,39,390	0/0:14,0:14:35.95:0,36,349	0/0:22,0:22:66.15:0,66,673	0/0:19,0:19:51.11:0,51,520	0/0:22,0:22:60.13:0,60,612	0/0:27,0:27:69.14:0,69,699	0/0:8,0:8:24.05:0,24,245	0/0:19,0:19:51.11:0,51,520	0/0:23,0:23:66.15:0,66,673	0/0:9,0:9:24.05:0,24,244	1/1:1,22:23:60.19:755,60,0	1/1:1,17:18:48.15:604,48,0	0/0:21,0:21:63.11:0,63,628	0/0:20,0:20:60.14:0,60,612	0/0:19,0:19:45.09:0,45,458	0/0:5,0:5:12.03:0,12,122	0/0:16,0:16:42.09:0,42,428	0/0:24,0:24:69.16:0,69,703	0/0:19,0:19:51.12:0,51,520	0/0:15,0:15:45.10:0,45,459	0/0:25,0:25:66.13:0,66,666	0/0:10,0:10:30.07:0,30,306	0/0:23,0:23:63.14:0,63,643	0/0:27,0:28:80.21:0,80,802	0/0:33,0:31:87.19:0,87,888	0/0:10,0:10:30.07:0,30,306
chr10	80224731	.	CAA	C	6564.63	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=1.501;DP=490;FS=7.694;HRun=10;HaplotypeScore=69.9451;InbreedingCoeff=0.9857;MQ=67.59;MQ0=0;MQRankSum=0.252;QD=27.58;ReadPosRankSum=1.034;VQSLOD=4.6197;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:29:75.20:836,75,0	1/1:2,5:7:12.02:134,12,0	0/0:11,0:10:14.76:0,15,166	0/0:11,0:9:21.06:0,21,306	1/1:1,18:19:51.13:566,51,0	0/0:2,0:16:39.06:0,39,372	0/0:16,0:16:39.13:0,39,619	1/1:2,29:31:87.21:960,87,0	0/0:23,0:24:71.73:0,72,1101	1/1:2,20:22:60.15:667,60,0	1/1:0,10:10:30.08:334,30,0	0/0:17,0:17:45.15:0,45,713	0/0:7,0:22:54.07:0,54,260	0/0:5,0:19:44.46:0,44,157	1/1:3,25:28:75.19:836,75,0	0/0:15,0:15:42.14:0,42,665	1/1:1,12:14:24:326,24,0	1/1:0,12:12:30.08:334,30,0	1/1:4,5:9:15.03:167,15,0	1/1:2,17:19:45.10:502,45,0	1/1:1,8:9:18.05:201,18,0	0/0:19,0:20:56.67:0,57,844	0/0:18,0:18:45.14:0,45,675	0/0:26,0:27:74.74:0,75,1150	1/1:3,6:9:18.04:201,18,0	0/0:5,2:30:17.27:0,17,750	1/1:2,18:20:45.12:502,45,0	0/0:1,0:6:18.03:0,18,191
chr10	80225099	.	AAAGAAGAAGAAGAAGAAG	A	3578.80	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.037;DP=595;FS=3.647;HRun=0;HaplotypeScore=288.6330;InbreedingCoeff=0.8449;MQ=56.20;MQ0=3;MQRankSum=-2.069;QD=62.79;ReadPosRankSum=3.232;VQSLOD=3.0029;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:44.58:0,45,2489	0/0:8,0:8:18.06:0,18,1250	0/0:25,0:21:6.02:0,6,95	0/0:12,0:7:6.02:0,6,165	0/0:28,0:28:60.21:0,60,4036	1/1:9,13:22:30.10:1462,30,0	0/0:19,0:26:36.11:0,36,1384	0/0:32,0:30:69.23:0,69,4148	0/0:11,0:23:54.19:0,54,3525	0/0:30,0:28:60.21:0,60,4127	0/0:26,0:25:63.22:0,63,4274	0/0:3,0:14:15.36:0,15,1180	0/0:25,0:25:69.19:0,69,4211	0/0:24,0:24:54.18:0,54,3415	0/0:22,0:22:36.12:0,36,2254	0/0:19,0:20:45.15:0,45,3329	0/0:10,0:10:10.28:0,10,431	0/0:2,0:2:3.01:0,3,235	0/0:19,0:18:30.10:0,30,1038	0/0:24,0:24:60.21:0,60,3529	0/0:7,0:7:14.33:0,14,548	0/0:10,0:22:48.16:0,48,3296	0/0:17,0:34:59.01:0,59,4143	0/0:6,0:14:24.08:0,24,1639	0/0:28,0:28:69.24:0,69,4688	1/1:5,16:21:42.09:1385,42,0	0/0:37,0:37:72.25:0,72,4830	1/1:9,5:14:15.05:732,15,0
chr10	80226637	.	AGT	A	8000.93	PASS	AB=0.821;AC=33;AF=0.589;AN=56;BaseQRankSum=6.185;DP=687;FS=10.053;HRun=0;HaplotypeScore=103.1426;InbreedingCoeff=0.7604;MQ=68.29;MQ0=10;MQRankSum=0.804;QD=18.35;ReadPosRankSum=3.158;VQSLOD=4.6342;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,22:41:27.16:515,27,0	1/1:1,7:8:18.06:215,18,0	0/0:39,0:23:26.81:0,27,421	0/0:40,0:27:18.98:0,19,251	1/1:2,38:39:93.29:1108,93,0	0/0:12,0:27:50.74:0,51,445	0/0:13,0:13:28.34:0,28,433	1/1:16,22:39:68.78:743,69,0	0/1:15,3:18:65.13:65,0,481	1/1:10,12:21:36.06:402,36,0	1/1:3,24:29:66.03:765,66,0	0/0:16,1:17:6.37:0,6,562	1/1:3,0:22:53.97:265,54,0	1/1:4,0:17:34.05:167,34,0	1/1:2,11:13:27.08:322,27,0	0/0:16,0:16:42.12:0,42,640	1/1:8,20:27:39.92:481,40,0	0/1:7,8:15:7.78:295,0,8	1/1:6,8:14:6.85:275,7,0	1/1:3,24:28:74.89:850,75,0	1/1:8,15:26:41.41:413,41,0	0/0:20,0:20:54.17:0,54,828	0/0:29,1:31:28.35:0,28,1046	0/1:19,1:20:18.99:19,0,596	1/1:4,23:28:54:622,54,0	0/0:4,1:28:37.32:0,37,572	1/1:4,16:21:41.96:479,42,0	0/0:9,0:20:38.78:0,39,353
chr10	80227182	.	A	AT	2147.02	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.002;DP=558;FS=15.369;HRun=2;HaplotypeScore=55.7801;InbreedingCoeff=0.9924;MQ=88.66;MQ0=0;MQRankSum=-2.941;QD=37.02;ReadPosRankSum=1.564;VQSLOD=2.5395;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:36.12:518,36,0	0/0:13,0:13:39.10:0,39,468	0/0:24,0:24:66.13:0,66,763	0/0:17,0:16:45.14:0,45,558	0/0:36,0:36:99:0,102,1250	0/0:32,0:32:93.29:0,93,1152	0/0:5,0:5:15.05:0,15,186	0/0:33,0:33:93.28:0,93,1132	0/0:16,0:16:48.15:0,48,595	0/0:21,0:21:63.20:0,63,781	0/0:29,0:29:72.21:0,72,881	0/0:23,0:23:63.18:0,63,768	1/1:0,22:22:60.20:864,60,0	1/1:0,21:21:63.21:907,63,0	0/0:20,0:19:57.15:0,57,691	0/0:17,0:17:51.16:0,51,632	0/0:16,0:16:39.12:0,39,483	0/0:7,0:7:21.04:0,21,244	0/0:16,0:16:45.14:0,45,558	0/0:24,0:24:69.19:0,69,830	0/0:12,0:12:36.11:0,36,446	0/0:16,0:16:48.15:0,48,595	0/0:19,0:19:48.15:0,48,595	0/0:9,0:9:27.08:0,27,335	0/0:18,0:18:51.13:0,51,616	0/0:22,0:22:60.16:0,60,709	0/0:30,0:30:84.26:0,84,1041	0/0:25,0:25:75.24:0,75,929
chr10	80227325	.	T	TC	1473.68	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.343;DP=600;FS=7.795;HRun=5;HaplotypeScore=63.7256;InbreedingCoeff=0.9102;MQ=88.22;MQ0=1;MQRankSum=-1.986;QD=27.81;ReadPosRankSum=0.700;VQSLOD=3.5443;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:18.03:0,18,186	0/0:3,0:3:3.01:0,3,32	0/0:60,0:49:81.90:0,82,901	0/0:35,0:28:30.37:0,30,395	0/0:29,0:29:84.15:0,84,874	0/0:31,0:31:87.11:0,87,890	0/0:11,0:11:30.06:0,30,315	0/0:26,0:27:63.09:0,63,639	0/0:16,0:16:45.11:0,45,483	0/0:20,0:20:60.15:0,60,644	0/0:26,0:26:78.16:0,78,824	0/0:18,0:18:54.12:0,54,571	1/1:3,27:30:63.20:817,63,0	1/1:1,22:23:60.19:778,60,0	0/0:22,0:22:63.16:0,63,676	0/0:22,0:22:66.15:0,66,699	0/0:13,0:13:32.97:0,33,319	0/0:12,0:12:30.07:0,30,319	0/0:10,0:10:21.05:0,21,220	0/0:24,0:24:72.17:0,72,764	0/0:19,0:19:54.12:0,54,570	0/0:15,0:15:45.11:0,45,483	0/0:23,0:23:60.14:0,60,637	0/0:10,0:10:30.06:0,30,313	0/0:16,0:16:48.08:0,48,502	0/0:22,0:22:66.15:0,66,691	0/0:42,0:42:99:0,126,1311	0/0:14,0:14:42.11:0,42,450
chr10	80227722	.	ACAAGCAAG	A	1701.20	PASS	AC=28;AF=0.609;AN=46;BaseQRankSum=5.071;DP=235;FS=5.903;HRun=0;HaplotypeScore=64.8291;InbreedingCoeff=0.6947;MQ=64.40;MQ0=6;MQRankSum=-5.907;QD=13.94;ReadPosRankSum=0.166;VQSLOD=1.3598;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:4,0:4:9.03:207,9,0	0/0:24,0:13:21.07:0,21,585	0/0:23,0:15:22.62:0,23,491	1/1:14,0:14:3.01:77,3,0	1/1:4,0:4:6.02:65,6,0	0/0:6,0:6:15.05:0,15,573	1/1:17,2:18:15.03:259,15,0	0/0:7,0:7:12.04:0,12,493	1/1:6,0:6:3.01:65,3,0	1/1:15,0:15:5.98:97,6,0	0/0:6,0:6:15.05:0,15,594	1/1:3,0:3:3.01:77,3,0	./.	1/1:6,0:6:8.96:148,9,0	./.	1/1:7,2:9:6.02:142,6,0	1/1:9,0:9:6.02:142,6,0	1/1:5,0:5:3.01:65,3,0	1/1:9,0:9:3.01:77,3,0	./.	0/0:6,0:6:12.04:0,12,435	0/0:4,0:4:9.03:0,9,368	0/0:7,0:7:12.04:0,12,493	./.	0/0:11,0:11:6.04:0,6,126	1/1:9,3:12:21.05:430,21,0	1/1:7,0:7:6.75:22,7,0
chr10	80227744	.	AAGCAAGCAATATAT	A	3904.14	PASS	AB=1.000;AC=27;AF=0.563;AN=48;BaseQRankSum=1.871;DP=232;FS=6.506;HRun=0;HaplotypeScore=78.0268;InbreedingCoeff=0.6463;MQ=66.67;MQ0=10;MQRankSum=-5.860;QD=39.44;ReadPosRankSum=2.664;VQSLOD=1.7024;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,5:5:9.03:336,9,0	0/0:40,0:15:36.06:0,36,832	0/0:52,0:20:39.43:0,39,732	1/1:4,4:8:3.01:77,3,0	0/0:3,0:3:5.97:0,6,44	0/0:5,0:5:15.05:0,15,573	1/1:28,0:28:63.19:1202,63,0	0/0:4,0:4:12.04:0,12,528	1/1:0,6:6:7.32:255,7,0	1/1:2,4:6:6.02:161,6,0	0/0:5,0:5:15.05:0,15,720	1/1:2,0:2:3.01:38,3,0	0/0:1,0:1:3.01:0,3,73	1/1:1,5:6:9.03:341,9,0	./.	1/1:3,1:4:6.02:246,6,0	1/1:2,2:4:9.03:311,9,0	1/1:1,2:3:3.01:129,3,0	1/1:1,5:6:3.01:77,3,0	./.	0/0:4,0:4:12.04:0,12,435	0/0:3,0:3:9.03:0,9,368	0/0:4,0:4:12.04:0,12,493	./.	0/1:7,0:7:81.19:81,0,99	1/1:7,2:9:21.05:564,21,0	1/1:5,0:5:9.01:85,9,0
chr10	80227748	.	AAGCAATATAT	A	3136.66	PASS	AC=28;AF=0.583;AN=48;BaseQRankSum=3.255;DP=211;FS=4.028;HRun=0;HaplotypeScore=59.5546;InbreedingCoeff=0.7209;MQ=71.52;MQ0=10;MQRankSum=-5.032;QD=38.72;ReadPosRankSum=4.160;VQSLOD=2.3879;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:5,0:5:9.03:190,9,0	0/0:42,0:15:26.51:0,27,411	0/0:56,0:21:32.26:0,32,360	1/1:4,0:4:3.01:30,3,0	1/1:0,0:3:6.02:78,6,0	0/0:5,0:5:15.04:0,15,287	1/1:25,0:25:57.18:1064,57,0	0/0:4,0:4:12.04:0,12,316	1/1:6,0:6:8.31:208,8,0	1/1:4,0:4:6.02:94,6,0	0/0:5,0:5:15.03:0,15,436	0/0:2,0:2:1.82:0,2,5	0/0:1,0:1:3.01:0,3,56	1/1:5,0:5:9.03:225,9,0	./.	1/1:3,0:3:6.02:148,6,0	1/1:3,0:3:9.03:212,9,0	1/1:2,0:2:3.01:80,3,0	1/1:5,0:5:3.01:30,3,0	./.	0/0:3,0:3:9.03:0,9,210	0/0:3,0:3:9.03:0,9,209	0/0:4,0:4:12.04:0,12,261	./.	1/1:0,6:6:18.04:387,18,0	1/1:5,0:5:15.04:263,15,0	1/1:0,5:5:9.03:304,9,0
chr10	80227752	.	AATATAT	A	2238.53	PASS	AC=24;AF=0.600;AN=40;BaseQRankSum=-1.198;DP=212;FS=5.942;HRun=0;HaplotypeScore=54.7590;InbreedingCoeff=0.5931;MQ=74.14;MQ0=10;MQRankSum=-2.855;QD=30.66;ReadPosRankSum=1.745;VQSLOD=2.1318;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:5,0:5:6.01:105,6,0	0/0:44,0:16:9.03:0,9,131	0/0:60,0:21:23.51:0,24,249	0/0:4,0:4:0:0,0,0	1/1:3,0:3:5.99:47,6,0	./.	1/1:3,22:26:54.17:1058,54,0	0/0:3,0:3:3.01:0,3,37	1/1:6,0:6:9.03:181,9,0	1/1:4,0:4:3:64,3,0	0/0:4,0:4:6.02:0,6,139	0/0:3,0:3:2.99:0,3,27	0/0:2,0:2:6.02:0,6,140	1/1:5,0:5:9.03:169,9,0	./.	1/1:3,0:3:6.02:92,6,0	1/1:2,1:3:9.03:156,9,0	1/1:2,0:2:3.01:52,3,0	0/0:5,0:5:0:0,0,0	./.	./.	./.	./.	./.	1/1:6,0:6:9.03:170,9,0	1/1:5,0:5:8.90:121,9,0	1/1:5,0:5:9.03:159,9,0
chr10	80227831	.	T	TTA	2326.35	PASS	AC=24;AF=0.571;AN=42;BaseQRankSum=-7.076;DP=150;FS=15.468;HRun=0;HaplotypeScore=28.7366;InbreedingCoeff=0.5944;MQ=83.87;MQ0=2;MQRankSum=2.089;QD=31.02;ReadPosRankSum=-0.912;VQSLOD=3.1598;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,1:2:3.01:49,3,0	0/0:18,0:10:2.80:0,3,73	0/0:24,0:8:6.99:0,7,34	1/1:0,1:1:3.01:49,3,0	0/0:4,0:4:12.04:0,12,147	./.	1/1:15,24:40:75.23:1164,75,0	0/0:1,0:2:2.84:0,3,14	1/1:1,2:3:6.02:97,6,0	1/1:0,2:2:3.01:49,3,0	0/0:2,0:2:6.02:0,6,72	./.	0/0:2,0:2:5.68:0,6,28	1/1:1,1:2:3.01:49,3,0	0/0:2,0:2:6.02:0,6,73	1/1:0,9:10:24.08:389,24,0	1/1:0,4:4:12.04:195,12,0	./.	1/1:1,1:2:3.01:49,3,0	1/1:0,1:1:3.01:49,3,0	./.	./.	./.	1/1:0,5:5:15.05:243,15,0	0/0:2,0:2:6.02:0,6,73	1/1:0,3:3:6.02:97,6,0	0/0:16,0:17:45.14:0,45,550
chr10	80228011	.	G	GA	854.18	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.902;DP=349;FS=0.000;HRun=2;HaplotypeScore=34.3074;InbreedingCoeff=0.9551;MQ=91.43;MQ0=0;MQRankSum=-2.104;QD=34.17;ReadPosRankSum=1.690;VQSLOD=3.1674;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:4:12.04:173,12,0	0/0:7,0:7:18.06:0,18,223	0/0:17,0:17:47.99:0,48,529	0/0:12,0:12:30.08:0,30,350	0/0:16,0:16:42.11:0,42,495	0/0:22,0:22:63.14:0,63,749	0/0:9,0:9:24.08:0,24,297	0/0:31,0:31:87.25:0,87,1047	0/0:13,0:13:39.12:0,39,483	0/0:22,0:22:60.19:0,60,742	0/0:7,0:7:21.07:0,21,260	0/0:13,0:13:39.11:0,39,470	1/1:0,10:10:27.09:389,27,0	1/1:0,11:11:30.10:432,30,0	0/0:12,0:12:36.11:0,36,446	0/0:9,0:9:24.07:0,24,297	0/0:17,0:17:45.14:0,45,557	0/0:4,0:4:9.03:0,9,112	0/0:17,0:17:51.14:0,51,602	0/0:10,0:10:30.09:0,30,369	0/0:11,0:11:33.10:0,33,408	0/0:10,0:10:30.09:0,30,372	0/0:12,0:12:33.10:0,33,409	0/0:5,0:5:15:0,15,169	0/0:9,0:9:27.08:0,27,334	0/0:14,0:14:39.12:0,39,483	0/0:17,0:16:51.14:0,51,618	0/0:8,0:8:24.08:0,24,297
chr10	80228381	.	GTGTA	G	351.52	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.444;DP=588;FS=8.445;HRun=0;HaplotypeScore=124.3533;InbreedingCoeff=0.8757;MQ=65.69;MQ0=6;MQRankSum=-1.395;QD=5.33;ReadPosRankSum=-2.179;VQSLOD=1.3689;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:12.93:241,13,0	0/0:9,0:9:15.01:0,15,196	0/0:32,0:20:47.19:0,47,474	0/0:28,0:22:44.95:0,45,442	0/0:37,0:37:50.89:0,51,542	0/0:17,0:17:33.91:0,34,470	0/0:25,0:25:44.09:0,44,948	0/0:32,0:31:25.29:0,25,559	0/0:20,0:20:17.83:0,18,253	0/0:26,0:26:62.48:0,62,810	0/0:11,0:11:17.95:0,18,206	0/0:13,0:13:29.73:0,30,504	1/1:2,10:12:8.63:122,9,0	1/1:2,29:30:5.54:112,6,0	0/0:10,0:10:8.91:0,9,66	0/0:15,0:15:39.02:0,39,579	0/0:12,0:12:20.78:0,21,277	0/0:11,0:11:17.83:0,18,127	0/0:12,0:12:32.52:0,33,417	0/0:22,0:22:41.24:0,41,444	0/0:23,0:23:12.11:0,12,306	0/0:25,0:25:39.11:0,39,758	0/0:16,0:16:34.28:0,34,396	0/0:32,0:32:70.30:0,70,1113	0/0:25,0:25:32.99:0,33,327	0/0:26,0:26:28.47:0,28,918	0/0:30,0:30:75.13:0,75,864	0/0:13,0:13:35.93:0,36,724
chr10	80228385	.	A	ATGTGTG	2437.98	PASS	AB=0.900;AC=29;AF=0.558;AN=52;BaseQRankSum=1.343;DP=603;FS=1.401;HRun=0;HaplotypeScore=144.5895;InbreedingCoeff=0.3983;MQ=60.00;MQ0=8;MQRankSum=-1.775;QD=6.48;ReadPosRankSum=-3.173;VQSLOD=1.9665;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:15.44:19,0,15	1/1:9,1:10:5.99:48,6,0	./.	./.	1/1:19,18:39:5.61:106,6,0	0/1:9,0:18:21.70:156,0,22	0/0:24,0:24:23.14:0,23,625	1/1:28,0:27:13.25:162,13,0	0/0:7,0:19:3.16:0,3,19	1/1:14,10:26:26.19:460,26,0	1/1:7,2:10:5.95:92,6,0	0/1:14,0:14:0.48:0,0,282	0/1:15,0:14:8.86:9,0,32	0/0:32,0:31:5.39:0,5,73	1/1:11,0:11:3.01:49,3,0	0/0:14,0:14:15.05:0,15,262	1/1:12,0:12:6.02:168,6,0	0/1:5,6:12:0:0,0,0	1/1:9,5:14:15.50:332,16,0	1/1:11,11:25:9.03:229,9,0	0/1:24,0:24:12.23:148,0,12	0/0:25,0:25:19.32:0,19,418	0/0:15,0:15:13.73:0,14,198	0/0:30,0:30:40.29:0,40,628	1/1:11,14:27:6.02:193,6,0	0/1:27,0:27:12.03:12,0,426	1/1:21,13:35:15.52:430,16,0	0/0:15,0:13:24.08:0,24,475
chr10	80228805	.	T	TA	748.24	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.707;DP=554;FS=11.918;HRun=7;HaplotypeScore=54.7162;InbreedingCoeff=0.9853;MQ=70.76;MQ0=0;MQRankSum=0.600;QD=24.94;ReadPosRankSum=-0.870;VQSLOD=2.9122;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:36.03:0,36,340	0/0:12,0:12:33:0,33,309	0/0:23,0:22:35.27:0,35,414	0/0:9,0:9:13.57:0,14,121	0/0:25,0:25:69.11:0,69,665	0/0:34,0:34:93.15:0,93,898	0/0:19,0:19:54.09:0,54,521	0/0:32,0:32:78.10:0,78,744	0/0:15,0:15:45.06:0,45,429	0/0:25,0:25:72.11:0,72,692	0/0:28,0:28:78.12:0,78,753	0/0:21,0:21:60.09:0,60,579	1/1:1,12:13:30.09:362,30,0	1/1:0,17:17:42.13:507,42,0	0/0:17,0:17:51.08:0,51,493	0/0:14,0:14:30.04:0,30,290	0/0:32,0:32:93.10:0,93,884	0/0:21,0:21:63.04:0,63,592	0/0:16,0:16:45.07:0,45,434	0/0:30,0:30:81.12:0,81,782	0/0:11,0:11:27.04:0,27,261	0/0:21,0:21:54.04:0,54,504	0/0:18,0:18:45.06:0,45,435	0/0:17,0:17:45.06:0,45,428	0/0:17,0:17:51.08:0,51,492	0/0:15,0:15:45.06:0,45,431	0/0:23,0:23:63.10:0,63,608	0/0:11,0:11:21.03:0,21,203
chr10	80228833	.	GT	G	282.56	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.272;DP=585;FS=10.146;HRun=1;HaplotypeScore=59.9950;InbreedingCoeff=0.9006;MQ=68.86;MQ0=0;MQRankSum=-3.581;QD=25.69;ReadPosRankSum=0.649;VQSLOD=2.3783;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:27.09:377,27,0	0/0:15,0:15:45.15:0,45,719	0/0:24,0:23:60.80:0,61,809	0/0:8,0:7:21.06:0,21,311	0/0:31,0:31:93.29:0,93,1436	0/0:36,0:36:99:0,108,1723	0/0:20,0:20:60.19:0,60,936	0/0:34,0:34:99:0,102,1517	0/0:16,0:16:48.16:0,48,765	0/0:29,0:29:87.27:0,87,1365	0/0:30,0:30:90.26:0,90,1364	0/0:22,0:22:66.17:0,66,961	0/0:18,0:18:48.15:0,48,744	0/0:15,0:15:36.12:0,36,575	0/0:17,0:17:51.16:0,51,792	0/0:14,0:14:42.13:0,42,640	0/0:33,0:33:98.33:0,98,1486	0/0:23,0:23:66.20:0,66,1029	0/0:22,0:21:63.21:0,63,977	0/0:29,0:29:87.24:0,87,1330	0/0:11,0:11:33.10:0,33,504	0/0:15,0:15:45.14:0,45,691	0/0:18,0:18:51.17:0,51,812	0/0:22,0:22:56.51:0,57,909	0/0:17,0:17:51.17:0,51,814	0/0:23,0:23:69.24:0,69,1102	0/0:30,0:30:90.31:0,90,1436	0/0:2,0:2:6.02:0,6,96
chr10	80229392	.	T	TA	1237.14	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.218;DP=586;FS=0.000;HRun=6;HaplotypeScore=58.8365;InbreedingCoeff=0.9753;MQ=77.28;MQ0=0;MQRankSum=-1.060;QD=30.93;ReadPosRankSum=1.222;VQSLOD=4.1247;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.18:0,78,795	0/0:7,0:7:15.03:0,15,153	0/0:27,0:25:64.33:0,64,620	0/0:18,0:18:42.07:0,42,414	0/0:24,0:24:60.11:0,60,605	0/0:21,0:21:63.14:0,63,643	0/0:9,0:9:27.06:0,27,276	0/0:28,0:28:66.13:0,66,668	0/0:30,0:30:87.20:0,87,887	0/0:22,0:22:54.12:0,54,551	0/0:23,0:23:63.12:0,63,629	0/0:19,0:19:48.06:0,48,469	1/1:0,18:18:51.16:642,51,0	1/1:2,20:22:57.18:717,57,0	0/0:14,0:14:39.09:0,39,398	0/0:21,0:21:63.12:0,63,635	0/0:22,0:22:57.13:0,57,581	0/0:16,0:16:39.06:0,39,388	0/0:24,0:24:66.14:0,66,668	0/0:33,0:33:87.19:0,87,886	0/0:10,0:10:27.03:0,27,266	0/0:20,0:20:54.12:0,54,551	0/0:20,0:20:54.12:0,54,551	0/0:20,0:20:57.13:0,57,582	0/0:21,0:21:51.11:0,51,520	0/0:32,0:32:81.17:0,81,820	0/0:34,0:34:90.18:0,90,910	0/0:4,0:4:12.03:0,12,122
chr10	80230303	.	AGG	A	2179.20	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=9.431;DP=640;FS=2.651;HRun=2;HaplotypeScore=68.7614;InbreedingCoeff=0.9151;MQ=55.38;MQ0=15;MQRankSum=3.242;QD=41.12;ReadPosRankSum=2.862;VQSLOD=3.8716;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:78.27:0,78,1561	0/0:10,0:10:30.10:0,30,609	0/0:3,0:1:3.01:0,3,71	./.	0/0:28,0:28:81.28:0,81,1644	0/0:18,0:18:54.12:0,54,1053	0/0:25,0:23:57.19:0,57,1125	0/0:42,0:33:96.33:0,96,1923	0/0:25,0:25:75.26:0,75,1522	0/0:35,0:35:99:0,99,1999	0/0:16,0:15:45.15:0,45,914	0/0:19,0:19:57.20:0,57,1158	1/1:1,24:25:60.20:979,60,0	1/1:0,28:28:81.28:1321,81,0	0/0:24,0:24:72.25:0,72,1463	0/0:16,0:16:48.14:0,48,905	0/0:32,0:32:93.32:0,93,1888	0/0:19,0:19:54.17:0,54,1059	0/0:20,0:14:42.14:0,42,830	0/0:36,0:36:99:0,108,2123	0/0:21,0:20:60.21:0,60,1208	0/0:31,0:30:87.30:0,87,1760	0/0:21,0:21:63.22:0,63,1280	0/0:8,0:8:24.08:0,24,488	0/0:23,0:23:69.24:0,69,1401	0/0:31,0:31:90.30:0,90,1796	0/0:38,0:38:99:0,114,2261	0/0:13,0:13:36.12:0,36,730
chr10	80230575	.	AACTCAAGAATTTAG	A	24206.05	PASS	AB=0.529;AC=31;AF=0.554;AN=56;BaseQRankSum=16.695;DP=504;FS=1.615;HRun=0;HaplotypeScore=200.6273;InbreedingCoeff=0.8998;MQ=50.97;MQ0=5;MQRankSum=-14.782;QD=84.05;ReadPosRankSum=2.063;VQSLOD=4.3300;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.23:0,69,4222	1/1:0,5:5:12.04:503,12,0	0/0:25,0:19:46.34:0,46,2376	0/0:15,0:11:30.10:0,30,1401	1/1:1,25:26:69.11:2359,69,0	1/1:0,22:22:39.13:1635,39,0	0/0:14,0:14:36.11:0,36,2170	1/1:4,22:26:65.98:1803,66,0	0/0:12,0:12:30.10:0,30,2079	1/1:1,18:19:54.11:1940,54,0	1/1:2,23:25:60.21:2378,60,0	0/0:19,0:19:57.18:0,57,3636	1/1:0,22:22:48.16:2011,48,0	1/1:1,16:17:39.13:1635,39,0	1/1:0,18:18:45.15:1887,45,0	0/0:15,0:15:45.15:0,45,2990	0/1:2,16:18:99:608,0,175	1/1:1,7:8:9.03:377,9,0	1/1:3,12:13:36.05:1137,36,0	1/1:1,23:23:60.16:2409,60,0	1/1:1,5:6:6.02:252,6,0	0/0:23,0:23:69.19:0,69,3882	0/0:23,0:23:66.23:0,66,4507	0/0:6,0:6:18.06:0,18,1219	1/1:2,11:13:27.09:1132,27,0	0/0:24,0:24:72.24:0,72,4682	1/1:1,23:24:50.89:2138,51,0	0/0:14,0:14:42.14:0,42,2797
chr10	80231793	.	T	TC	3568.24	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-0.157;DP=660;FS=4.567;HRun=3;HaplotypeScore=75.4314;InbreedingCoeff=0.9972;MQ=65.63;MQ0=1;MQRankSum=-2.318;QD=37.17;ReadPosRankSum=3.605;VQSLOD=4.1781;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:99:1385,99,0	0/0:8,0:8:24.03:0,24,272	0/0:26,0:26:72.18:0,72,848	0/0:29,0:27:69.17:0,69,774	0/0:27,0:27:72.12:0,72,832	1/1:1,22:23:57.19:798,57,0	0/0:19,0:19:45.14:0,45,540	0/0:34,0:34:87.27:0,87,1044	0/0:24,0:24:66.15:0,66,774	0/0:30,0:30:84.25:0,84,1000	0/0:21,0:21:57.17:0,57,683	0/0:23,0:23:69.21:0,69,827	1/1:0,20:20:60.20:840,60,0	1/1:0,15:15:39.13:546,39,0	0/0:28,0:28:81.24:0,81,962	0/0:19,0:19:54.16:0,54,638	0/0:33,0:33:90.28:0,90,1079	0/0:24,0:24:57.17:0,57,683	0/0:17,0:17:48.15:0,48,576	0/0:25,0:25:69.12:0,69,787	0/0:44,0:44:99:0,123,1445	0/0:26,0:26:72.16:0,72,805	0/0:16,0:16:45.14:0,45,539	0/0:25,0:25:75.19:0,75,883	0/0:18,0:18:48.13:0,48,563	0/0:20,0:20:57.14:0,57,668	0/0:22,0:22:60.03:0,60,719	0/0:6,0:6:18.06:0,18,216
chr10	80231889	.	CCA	C	11653.46	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=0.924;DP=630;FS=3.169;HRun=0;HaplotypeScore=102.7533;InbreedingCoeff=0.9997;MQ=77.87;MQ0=2;MQRankSum=-0.503;QD=43.32;ReadPosRankSum=1.143;VQSLOD=6.5146;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,2436	1/1:0,9:9:24.08:391,24,0	0/0:28,0:27:71.43:0,71,1481	0/0:20,0:20:50.06:0,50,855	1/1:0,20:20:57.19:907,57,0	0/0:17,0:17:51.18:0,51,1036	0/0:24,0:24:72.25:0,72,1462	1/1:0,33:33:93.30:1475,93,0	0/0:18,0:18:54.19:0,54,1096	1/1:0,26:25:72.25:1165,72,0	1/1:0,16:16:45.07:701,45,0	0/0:20,0:20:60.21:0,60,1201	0/0:21,0:21:63.22:0,63,1280	0/0:36,0:36:99:0,99,2010	1/1:0,19:19:54.18:880,54,0	0/0:23,0:23:69.23:0,69,1368	1/1:0,27:27:66.23:1076,66,0	1/1:0,17:17:39.13:635,39,0	1/1:0,19:20:57.19:907,57,0	1/1:1,24:25:63.22:1026,63,0	1/1:0,18:18:48.16:782,48,0	0/0:22,0:22:66.19:0,66,1223	0/0:21,0:21:63.22:0,63,1227	0/0:22,0:22:66.23:0,66,1339	1/1:0,21:20:54.18:880,54,0	0/0:33,1:34:53.45:0,53,1843	1/1:0,18:18:51.17:828,51,0	0/0:14,0:14:42.14:0,42,852
chr10	80231935	.	TA	T	3711.06	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.186;DP=557;FS=3.924;HRun=7;HaplotypeScore=79.6060;InbreedingCoeff=0.9913;MQ=63.75;MQ0=2;MQRankSum=-0.753;QD=25.95;ReadPosRankSum=3.727;VQSLOD=4.4403;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:99:1008,99,0	0/0:12,0:12:36.09:0,36,437	0/0:15,0:13:24.04:0,24,276	0/0:8,0:8:18.50:0,19,212	0/0:20,0:20:48.15:0,48,604	1/1:1,19:20:51.12:520,51,0	0/0:20,0:20:57.18:0,57,717	0/0:34,0:34:96.27:0,96,1159	0/0:18,0:18:51.16:0,51,640	0/0:25,0:25:66.21:0,66,821	0/0:19,0:19:48.13:0,48,578	0/0:18,0:18:45.14:0,45,565	1/1:1,20:21:54.11:551,54,0	1/1:4,20:24:48.10:489,48,0	0/0:18,0:18:48.14:0,48,582	0/0:22,0:22:60.19:0,60,754	0/0:15,0:15:33.11:0,33,415	0/0:18,0:18:44.95:0,45,508	0/0:28,0:27:66.09:0,66,829	0/0:22,0:21:51.16:0,51,642	0/0:10,0:10:30.10:0,30,377	0/0:11,0:11:30.08:0,30,363	0/0:20,0:20:54.15:0,54,654	0/0:15,0:15:36.12:0,36,453	0/0:17,0:17:45.12:0,45,551	1/1:2,27:29:11.86:745,12,0	0/0:29,0:29:81.26:0,81,1018	1/1:1,13:13:39.09:398,39,0
chr10	80232088	.	TA	T	7757.78	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=12.279;DP=472;FS=17.315;HRun=9;HaplotypeScore=65.1841;InbreedingCoeff=0.9760;MQ=73.92;MQ0=0;MQRankSum=-2.357;QD=22.68;ReadPosRankSum=1.314;VQSLOD=3.8862;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:12:30.02:275,30,0	1/1:0,8:8:21.01:192,21,0	0/0:10,0:10:23.28:0,23,247	0/0:12,0:12:24.06:0,24,261	1/1:0,26:26:78.04:714,78,0	1/1:3,14:17:36.01:330,36,0	0/0:12,0:12:36.11:0,36,415	1/1:4,29:33:84:763,84,0	0/0:21,0:21:57.16:0,57,650	1/1:2,17:19:51.02:467,51,0	1/1:5,16:21:45.01:412,45,0	0/0:8,0:8:21.06:0,21,242	1/1:3,19:22:31.01:493,31,0	1/1:2,23:25:57.03:522,57,0	1/1:0,16:16:45.02:412,45,0	0/0:21,0:21:54.15:0,54,614	1/1:0,3:3:9:82,9,0	1/1:3,10:13:27.01:247,27,0	1/1:1,15:16:45.02:412,45,0	1/1:3,21:25:50.03:445,50,0	1/1:2,10:12:30.01:275,30,0	0/0:15,0:15:36.11:0,36,415	0/0:18,0:18:54.08:0,54,587	0/0:13,0:13:39.07:0,39,435	1/1:1,15:16:42.02:384,42,0	1/1:2,28:30:81.02:737,81,0	1/1:5,13:18:7.44:322,7,0	1/1:0,10:10:30.02:274,30,0
chr10	80233609	.	AGGAAGGAG	A	7751.45	PASS	AB=0.919;AC=28;AF=0.500;AN=56;BaseQRankSum=6.796;DP=702;FS=2.675;HRun=0;HaplotypeScore=203.2266;InbreedingCoeff=0.5233;MQ=47.88;MQ0=18;MQRankSum=-5.272;QD=22.53;ReadPosRankSum=-1.774;VQSLOD=4.2733;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:13:33.51:34,0,68	1/1:2,4:6:9.03:210,9,0	0/0:35,0:12:8.76:0,9,129	0/0:56,0:18:23.11:0,23,407	1/1:6,7:13:27.04:555,27,0	0/1:12,0:12:66.81:67,0,194	0/0:32,0:32:60.95:0,61,1731	1/1:13,13:23:36.57:685,37,0	0/0:45,0:45:99:0,115,3880	1/1:27,3:29:44.88:745,45,0	1/1:9,14:21:18.06:411,18,0	0/0:34,0:34:87.17:0,87,2633	0/1:32,0:31:21.09:21,0,848	0/1:24,0:23:20.99:21,0,659	1/1:22,6:25:34.52:600,35,0	0/0:35,0:35:93.32:0,93,3244	0/1:18,4:22:99:503,0,116	1/1:16,1:17:1.49:483,1,0	0/1:8,8:14:10.06:570,0,10	1/1:4,17:21:39.02:794,39,0	1/1:18,1:18:31.52:528,32,0	0/0:17,0:17:38.97:0,39,956	0/0:23,0:22:42.13:0,42,1200	0/0:42,0:41:75.84:0,76,3007	1/1:17,2:17:30.09:585,30,0	0/0:28,0:28:60.09:0,60,1676	1/1:20,2:22:51.07:940,51,0	0/0:8,0:7:9.03:0,9,160
chr10	80233621	.	AGGAG	A	3073.53	PASS	AB=0.994;AC=21;AF=0.375;AN=56;BaseQRankSum=9.968;DP=746;FS=0.000;HRun=0;HaplotypeScore=215.8257;InbreedingCoeff=-0.2118;MQ=46.38;MQ0=14;MQRankSum=-4.311;QD=7.25;ReadPosRankSum=-2.177;VQSLOD=2.3635;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,8:13:28.21:399,28,0	0/1:10,0:9:54.34:54,0,88	0/0:24,0:7:11.85:0,12,147	0/0:37,0:14:29.95:0,30,502	0/1:25,0:25:31.56:396,0,32	0/1:12,0:12:69.79:70,0,83	0/0:30,0:29:70.69:0,71,1538	0/1:25,0:20:99:181,0,114	0/0:50,0:50:47.61:0,48,2767	0/1:32,0:29:72.65:250,0,73	1/1:16,0:15:6.10:103,6,0	0/1:40,0:40:14.63:15,0,1901	0/1:37,0:36:82.44:82,0,428	0/1:28,0:27:75.80:76,0,313	1/1:26,0:23:6.31:265,6,0	0/0:38,0:38:99:0,111,2597	0/1:26,0:25:99:188,0,153	0/1:21,1:21:54.19:230,0,54	0/1:16,0:13:92.96:176,0,93	0/1:23,0:24:17.91:259,0,18	0/1:25,0:23:61.05:124,0,61	0/0:22,0:22:10.27:0,10,838	0/0:21,0:20:15.41:0,15,970	0/0:49,0:47:2.06:0,2,2286	0/1:22,0:21:20.02:161,0,20	0/0:35,0:35:23.05:0,23,1254	0/1:24,0:24:18.67:216,0,19	0/0:12,0:11:8.96:0,9,164
chr10	80233629	.	AG	A	1572.27	PASS	AB=0.906;AC=12;AF=0.214;AN=56;BaseQRankSum=1.000;DP=818;FS=1.533;HRun=2;HaplotypeScore=218.4198;InbreedingCoeff=-0.2652;MQ=44.79;MQ0=28;MQRankSum=-0.816;QD=5.28;ReadPosRankSum=1.062;VQSLOD=0.4946;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:4.95:0,5,111	0/1:18,0:17:1.53:2,0,422	0/0:18,0:5:11.98:0,12,134	0/0:41,0:10:29.59:0,30,403	0/1:26,1:27:13.61:14,0,558	0/0:16,0:16:32.42:0,32,397	0/0:31,0:28:77.38:0,77,1072	0/1:27,0:18:99:320,0,212	0/0:57,0:56:99:0,147,2053	0/1:26,6:25:99:170,0,538	0/1:23,0:22:1.89:2,0,342	0/0:46,0:46:99:0,129,1705	0/0:35,0:33:90.18:0,90,1222	0/0:30,0:29:67.99:0,68,922	0/0:30,1:28:4.15:0,4,474	0/0:49,0:48:99:0,126,1810	0/1:24,2:25:99:142,0,213	0/1:17,5:21:99:182,0,298	0/1:19,0:16:53.40:53,0,217	0/1:29,0:29:60.41:60,0,390	0/1:20,5:24:99:196,0,185	0/0:28,0:27:68.97:0,69,907	0/0:23,0:22:66.07:0,66,924	0/0:52,0:50:99:0,135,1868	0/1:21,6:26:99:193,0,471	0/0:36,0:36:95.05:0,95,1347	0/1:12,11:23:99:380,0,151	0/0:11,0:11:22.32:0,22,316
chr10	80233637	.	A	AG	856.57	PASS	AB=0.858;AC=5;AF=0.089;AN=56;BaseQRankSum=7.434;DP=899;FS=6.388;HRun=1;HaplotypeScore=251.7050;InbreedingCoeff=-0.0989;MQ=44.11;MQ0=44;MQRankSum=-6.844;QD=7.51;ReadPosRankSum=-1.112;VQSLOD=0.1804;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:15:5.05:5,0,218	0/0:19,0:18:48.15:0,48,606	0/0:20,0:3:5.87:0,6,78	0/0:36,0:9:21.03:0,21,270	0/0:34,0:34:78.18:0,78,1037	0/1:12,4:16:99:200,0,147	0/0:32,0:29:79.09:0,79,950	0/0:29,0:18:39.12:0,39,494	0/0:62,0:59:99:0,150,1860	0/0:37,0:27:72.22:0,72,905	0/0:30,0:28:48.70:0,49,585	0/0:49,0:49:99:0,124,1641	0/1:27,9:33:99:346,0,698	0/1:22,10:31:99:402,0,384	0/0:36,0:32:68.50:0,69,910	0/0:48,1:47:99:0,107,1428	0/0:29,0:28:15.46:0,15,497	0/0:26,1:25:22.73:0,23,583	0/0:20,0:17:45.12:0,45,544	0/0:35,0:34:78.19:0,78,942	0/0:29,0:27:49.47:0,49,607	0/0:30,0:28:72.10:0,72,881	0/0:29,0:28:68.96:0,69,948	0/0:55,0:52:69.27:0,69,1551	0/0:28,0:27:71.21:0,71,865	0/0:42,2:41:11.67:0,12,1167	0/0:23,0:23:55.90:0,56,667	0/1:12,1:13:14.79:15,0,287
chr10	80233657	.	AAG	A	1695.22	PASS	AB=0.727;AC=4;AF=0.074;AN=54;BaseQRankSum=5.591;DP=1129;FS=4.903;HRun=0;HaplotypeScore=346.3093;InbreedingCoeff=-0.0825;MQ=42.30;MQ0=92;MQRankSum=-4.783;QD=15.41;ReadPosRankSum=4.501;VQSLOD=2.4978;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,6:15:56.93:186,0,57	0/0:25,0:23:60.20:0,60,1059	./.	0/0:48,0:4:9:0,9,105	0/0:49,0:49:94.09:0,94,2057	0/1:15,5:19:99:310,0,156	0/0:42,0:34:79.30:0,79,1187	0/0:21,0:10:24.08:0,24,405	0/0:73,0:68:99:0,153,2413	0/0:64,0:53:99:0,139,2418	0/0:37,0:34:67.50:0,68,1414	0/0:54,0:53:99:0,137,2312	0/1:21,22:40:99:877,0,430	0/1:19,12:31:99:431,0,440	0/0:50,0:45:89.85:0,90,1866	0/0:62,0:60:99:0,135,2251	0/0:35,0:34:57.41:0,57,1124	0/0:32,0:29:70.95:0,71,1248	0/0:26,0:19:48.05:0,48,758	0/0:45,0:43:99:0,117,2008	0/0:35,0:33:72.74:0,73,1255	0/0:43,0:41:99:0,105,1703	0/0:37,0:36:89.21:0,89,1635	0/0:67,0:64:99:0,152,2887	0/0:37,0:36:59.35:0,59,1578	0/0:58,0:51:99:0,129,2424	0/0:28,0:28:39.89:0,40,1055	0/0:15,0:15:39.01:0,39,602
chr10	80233673	.	GAGGA	G	7864.29	PASS	AB=0.814;AC=15;AF=0.268;AN=56;BaseQRankSum=-4.722;DP=1301;FS=21.912;HRun=0;HaplotypeScore=478.3794;InbreedingCoeff=-0.3819;MQ=40.89;MQ0=102;MQRankSum=-2.257;QD=12.54;ReadPosRankSum=0.366;VQSLOD=2.6523;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:24.63:0,25,374	0/1:26,5:30:99:308,0,595	0/0:38,0:1:3.01:0,3,51	0/0:47,0:3:9.03:0,9,209	0/1:45,13:60:99:730,0,1007	0/1:23,2:24:37.04:37,0,657	0/0:43,0:35:71.67:0,72,1254	0/1:24,3:13:99:179,0,163	0/0:80,0:73:99:0,139,2858	0/1:62,18:68:99:1162,0,1072	0/1:37,5:39:99:183,0,772	0/0:59,0:58:99:0,153,3163	0/0:51,2:50:36.78:0,37,2829	0/1:31,3:34:31.65:32,0,1509	0/1:44,15:53:99:781,0,1011	0/0:66,0:64:99:0,144,3094	0/1:30,12:41:99:682,0,330	0/1:20,15:32:99:874,0,156	0/1:21,3:15:99:236,0,150	0/1:36,12:48:99:725,0,696	0/1:27,10:35:99:557,0,417	0/0:56,0:53:99:0,138,2875	0/0:46,0:45:99:0,112,2208	0/0:71,0:70:99:0,170,3442	0/1:25,20:43:99:845,0,512	0/0:64,1:58:99:0,101,3294	0/1:20,13:33:99:532,0,397	0/0:19,0:20:15.33:0,15,928
chr10	80233690	.	G	GGGAA	15660.10	PASS	AB=0.945;AC=27;AF=0.482;AN=56;BaseQRankSum=-1.964;DP=1508;FS=9.992;HRun=0;HaplotypeScore=563.8723;InbreedingCoeff=-0.8070;MQ=41.10;MQ0=79;MQRankSum=-0.539;QD=10.79;ReadPosRankSum=-2.577;VQSLOD=0.8579;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:23:33.77:223,0,34	0/1:33,0:32:99:426,0,490	0/0:26,0:3:5.77:0,6,60	0/0:31,0:3:8.83:0,9,79	0/1:74,0:74:99:629,0,1043	1/1:32,2:32:18.82:641,19,0	0/1:48,0:38:99:402,0,521	0/1:45,0:27:47.95:48,0,408	0/1:61,27:80:99:814,0,924	0/1:92,2:83:99:694,0,1587	0/1:50,2:50:99:665,0,483	0/1:67,6:71:99:1234,0,798	0/1:55,13:64:99:1710,0,273	0/1:44,6:50:99:864,0,313	0/1:61,1:55:99:470,0,1030	0/1:54,24:74:99:666,0,1137	0/1:44,0:43:80.35:80,0,844	0/1:40,0:38:12.12:12,0,1011	0/1:33,0:20:32.55:33,0,515	0/1:57,1:56:99:549,0,1048	0/1:48,0:44:99:232,0,767	0/1:53,21:70:99:1326,0,721	0/1:51,1:51:99:994,0,528	0/1:71,10:77:99:1136,0,1198	0/1:59,1:57:99:262,0,1184	0/1:76,0:68:99:936,0,830	0/1:34,2:36:99:244,0,708	0/1:21,0:21:99:371,0,227
chr10	80233735	.	A	AG	2843.93	PASS	AB=0.944;AC=16;AF=0.286;AN=56;BaseQRankSum=16.288;DP=1072;FS=206.158;HRun=1;HaplotypeScore=387.8044;InbreedingCoeff=-0.4462;MQ=38.78;MQ0=71;MQRankSum=-10.111;QD=4.96;ReadPosRankSum=-0.382;VQSLOD=-0.5172;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,6:15:82.84:282,0,83	0/1:14,0:14:99:108,0,216	0/0:36,0:3:2.84:0,3,39	0/0:31,0:1:3.01:0,3,39	0/1:40,4:42:99:296,0,648	0/1:19,4:21:99:152,0,334	0/0:49,0:35:81.16:0,81,1009	0/1:45,1:35:5.21:5,0,880	0/0:61,0:57:99:0,104,1421	0/1:62,4:59:99:367,0,1181	0/1:34,0:33:91.91:92,0,713	0/0:48,1:46:99:0,102,1407	0/1:39,3:40:99:294,0,837	0/1:33,5:37:99:344,0,602	0/1:31,0:29:99:107,0,609	0/0:57,1:52:66.39:0,66,1224	0/1:33,1:33:99:188,0,592	0/0:27,1:26:0.30:0,0,723	0/0:30,0:19:9.37:0,9,547	0/1:37,1:37:99:154,0,650	0/1:29,0:28:99:121,0,412	0/0:53,0:53:99:0,108,1315	0/0:34,0:33:29.07:0,29,719	0/0:57,0:54:99:0,144,1786	0/1:38,2:38:99:230,0,666	0/1:50,0:42:15.01:15,0,810	0/1:27,1:27:99:239,0,357	0/0:12,0:12:4.15:0,4,184
chr10	80233744	.	AG	A	1590.98	PASS	AB=0.855;AC=17;AF=0.304;AN=56;BaseQRankSum=17.121;DP=915;FS=157.621;HRun=1;HaplotypeScore=323.6796;InbreedingCoeff=-0.4402;MQ=38.36;MQ0=81;MQRankSum=-12.027;QD=3.22;ReadPosRankSum=1.957;VQSLOD=0.0547;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,6:13:28.76:240,0,29	0/1:8,3:11:86.90:87,0,255	0/0:40,0:1:0:0,0,0	0/0:32,0:1:3.01:0,3,48	0/1:32,8:38:99:125,0,801	0/1:10,3:12:99:121,0,180	0/0:42,3:32:70.79:0,71,1106	0/0:32,2:25:21.77:0,22,908	0/0:54,3:53:18.64:0,19,1376	0/1:46,9:48:99:154,0,1333	0/1:26,3:28:14.91:15,0,906	0/0:42,4:43:64.67:0,65,1225	0/1:31,3:32:99:148,0,844	0/1:28,5:32:99:219,0,489	0/1:23,3:24:39.73:40,0,699	0/0:43,2:40:56.97:0,57,977	0/1:24,4:27:90.80:91,0,617	0/0:23,1:21:16.17:0,16,781	0/0:25,1:15:8.74:0,9,635	0/1:27,5:31:67.99:68,0,829	0/1:23,4:26:92.62:93,0,478	0/1:40,5:45:25.84:26,0,1087	0/0:23,1:23:33.64:0,34,671	0/0:47,1:45:99:0,109,1673	0/1:22,10:31:99:118,0,783	0/1:36,2:32:41.69:42,0,970	0/1:19,6:24:99:125,0,506	0/1:11,1:12:37.06:37,0,212
chr10	80233756	.	AG	A	3124.20	PASS	AB=0.842;AC=22;AF=0.423;AN=52;BaseQRankSum=16.713;DP=698;FS=234.843;HRun=1;HaplotypeScore=259.4560;InbreedingCoeff=-0.7410;MQ=37.89;MQ0=79;MQRankSum=-10.627;QD=5.82;ReadPosRankSum=-0.554;VQSLOD=-0.6815;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,4:11:71.76:159,0,72	0/1:6,1:7:75.34:75,0,126	./.	./.	0/1:19,9:26:99:245,0,282	0/1:8,4:11:99:130,0,213	0/0:34,3:24:12.29:0,12,746	0/0:21,0:12:33.08:0,33,479	0/1:39,4:39:99:107,0,789	0/1:31,7:31:99:299,0,679	0/1:18,3:22:99:105,0,609	0/1:26,5:29:99:214,0,865	0/1:19,6:23:99:184,0,624	0/1:20,7:26:99:313,0,496	0/1:17,4:19:95.15:95,0,525	0/1:31,1:27:10.92:11,0,600	0/1:20,2:21:99:140,0,348	0/0:20,0:17:31.69:0,32,611	0/0:23,0:14:7.38:0,7,581	0/1:16,4:19:99:116,0,469	0/1:21,1:22:99:135,0,383	0/1:33,5:38:99:235,0,969	0/1:13,5:17:61.98:62,0,566	0/1:39,3:39:29.90:30,0,1223	0/1:18,5:23:99:140,0,571	0/1:25,5:24:99:153,0,583	0/1:12,3:14:99:137,0,246	0/1:4,4:8:26.96:188,0,27
chr10	80233762	.	AG	A	866.67	PASS	AB=0.848;AC=15;AF=0.288;AN=52;BaseQRankSum=12.199;DP=606;FS=140.447;HRun=2;HaplotypeScore=246.7109;InbreedingCoeff=-0.4079;MQ=37.25;MQ0=67;MQRankSum=-8.349;QD=3.05;ReadPosRankSum=-1.673;VQSLOD=0.1874;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,2:11:34.62:50,0,35	0/1:2,3:5:71.52:74,0,72	./.	./.	0/1:18,7:23:99:108,0,230	0/0:12,0:11:1.22:0,1,260	0/0:33,0:20:42.14:0,42,611	0/0:12,0:5:8.99:0,9,110	0/0:35,0:33:40.40:0,40,790	0/1:25,5:23:99:128,0,493	0/1:15,5:20:52.99:53,0,410	0/0:29,0:27:53.48:0,53,846	0/1:22,0:20:7.33:7,0,435	0/1:21,3:24:99:100,0,433	0/1:17,2:17:37.93:38,0,384	0/0:27,0:23:32.26:0,32,483	0/1:16,4:19:90.67:91,0,275	0/0:19,0:16:37.54:0,38,567	0/0:15,1:10:0.89:0,1,375	0/1:11,4:14:43.05:43,0,240	0/1:20,3:22:51.07:51,0,261	0/0:37,0:37:58.67:0,59,992	0/0:16,0:15:28.70:0,29,444	0/0:38,0:35:86.88:0,87,1143	0/1:13,6:19:99:141,0,307	0/1:27,1:22:2.63:3,0,512	0/1:10,4:13:99:120,0,194	0/1:8,0:8:1.47:1,0,120
chr10	80233849	.	AG	A	2516.22	PASS	AB=0.845;AC=23;AF=0.442;AN=52;BaseQRankSum=4.683;DP=445;FS=28.370;HRun=2;HaplotypeScore=152.4054;InbreedingCoeff=0.1607;MQ=29.45;MQ0=14;MQRankSum=-2.328;QD=9.22;ReadPosRankSum=1.034;VQSLOD=-0.1913;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:9:25.62:0,26,324	1/1:2,2:4:9:97,9,0	./.	./.	1/1:4,9:13:22.38:214,22,0	0/1:2,5:7:4.35:4,0,24	0/0:17,0:13:17.39:0,17,204	0/1:17,7:23:38.61:308,0,39	0/0:35,1:29:29.22:0,29,580	1/1:12,15:20:12.68:487,13,0	1/1:5,8:10:23.93:267,24,0	0/0:23,0:20:25.94:0,26,447	0/0:22,0:20:38.88:0,39,237	0/1:15,0:15:30.26:30,0,83	0/1:17,7:19:70:241,0,70	0/1:27,2:25:2.79:3,0,515	0/1:7,1:7:11.88:12,0,55	0/1:8,1:8:14.77:15,0,184	0/1:13,4:12:69.78:174,0,70	1/1:6,11:16:42.75:475,43,0	0/1:10,0:9:0.22:0,0,149	0/0:12,1:13:9.44:0,9,343	0/0:17,0:16:6.05:0,6,229	0/0:23,0:21:26.13:0,26,293	1/1:8,5:12:13.09:155,13,0	0/1:31,0:23:25.28:25,0,408	0/1:5,7:12:61.03:181,0,61	0/0:10,1:8:2.95:0,3,200
chr10	80233851	.	GA	G	1793.95	PASS	AB=0.855;AC=22;AF=0.407;AN=54;BaseQRankSum=6.791;DP=478;FS=12.163;HRun=2;HaplotypeScore=158.3537;InbreedingCoeff=-0.0574;MQ=29.62;MQ0=15;MQRankSum=-2.780;QD=5.70;ReadPosRankSum=2.374;VQSLOD=-0.4446;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:10:26.03:0,26,328	1/1:4,1:5:1.38:67,1,0	./.	0/0:1,0:1:3.01:0,3,34	1/1:13,2:15:3.92:119,4,0	0/0:7,0:7:16.89:0,17,103	0/0:16,1:13:18:0,18,225	0/1:21,6:25:99:271,0,101	0/0:37,2:32:1.29:0,1,640	1/1:22,5:20:13.06:311,13,0	1/1:13,2:12:9.30:145,9,0	0/1:19,4:20:20.66:21,0,521	0/0:24,0:21:46.58:0,47,447	0/0:16,0:16:20.16:0,20,222	0/1:21,3:19:55.81:152,0,56	0/1:27,3:26:39.84:40,0,551	0/1:5,3:7:29.77:30,0,72	0/0:10,1:10:3.70:0,4,161	0/1:15,4:14:66.97:136,0,67	1/1:15,3:17:44.51:329,45,0	0/1:7,3:9:18.72:19,0,143	0/0:13,0:13:12.16:0,12,340	0/1:17,1:17:17.66:18,0,314	0/0:22,1:21:13.49:0,13,339	0/1:16,3:18:7.87:92,0,8	0/1:30,4:26:99:109,0,409	0/1:11,1:12:62.81:87,0,63	0/1:9,2:8:16.12:16,0,165
chr10	80233853	.	AG	A	1605.36	PASS	AB=0.973;AC=18;AF=0.321;AN=56;BaseQRankSum=6.624;DP=498;FS=12.905;HRun=2;HaplotypeScore=155.8501;InbreedingCoeff=-0.1992;MQ=30.18;MQ0=15;MQRankSum=-1.571;QD=5.18;ReadPosRankSum=2.347;VQSLOD=-0.5931;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:11:16.27:0,16,300	0/1:5,0:5:3.94:56,0,4	0/0:2,0:1:3.01:0,3,32	0/0:2,0:2:6.02:0,6,77	0/1:14,1:15:1.46:82,0,1	0/0:8,0:8:12.09:0,12,66	0/0:17,0:13:16.84:0,17,206	0/1:26,2:26:86.37:225,0,86	0/0:41,0:34:36.03:0,36,832	0/1:29,0:21:16.45:337,0,16	0/1:15,0:12:3.74:52,0,4	0/0:23,0:20:18.41:0,18,555	0/0:25,0:22:43.94:0,44,543	0/0:17,0:17:29.44:0,29,327	0/1:23,1:19:32.34:198,0,32	0/1:32,1:29:9.67:10,0,713	0/1:8,0:7:9.87:10,0,94	0/1:11,0:10:5.05:5,0,176	0/1:21,0:15:32.43:71,0,32	1/1:18,0:17:20.58:244,21,0	0/1:10,0:9:9.67:10,0,158	0/1:13,1:14:20.85:21,0,393	0/0:18,0:17:14.45:0,14,353	0/0:23,0:21:34.55:0,35,441	0/1:18,1:18:69.73:77,0,70	0/1:34,2:28:99:215,0,274	0/1:12,1:13:51.65:138,0,52	0/1:11,0:8:15.54:16,0,130
chr10	80233861	.	AG	A	4588.20	PASS	AB=0.730;AC=22;AF=0.393;AN=56;BaseQRankSum=5.552;DP=581;FS=29.114;HRun=2;HaplotypeScore=159.3632;InbreedingCoeff=-0.3721;MQ=32.03;MQ0=19;MQRankSum=-5.025;QD=10.00;ReadPosRankSum=1.545;VQSLOD=1.1834;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,10:15:32.04:285,0,32	0/1:2,3:5:10.76:121,0,11	0/0:4,1:3:8.89:0,9,95	0/0:4,0:3:9.03:0,9,122	0/1:4,14:18:5.90:372,0,6	0/0:10,0:10:27.09:0,27,383	0/1:13,5:14:18.75:19,0,200	0/1:19,16:30:81.19:500,0,81	0/1:35,9:37:77.90:78,0,826	0/1:10,22:24:99:510,0,112	1/1:3,13:13:18.05:359,18,0	0/1:23,4:24:89.81:90,0,514	0/0:25,2:24:44.45:0,44,711	0/0:18,2:20:6.98:0,7,492	0/1:15,11:21:99:326,0,155	0/1:28,6:30:89.59:90,0,652	0/1:8,4:11:99:111,0,118	0/1:9,3:10:82.34:82,0,208	0/1:17,8:18:99:224,0,139	0/1:5,14:18:13.43:477,0,13	0/0:15,2:15:7.70:0,8,190	0/1:18,1:19:24.56:25,0,441	0/1:12,9:20:50.04:50,0,363	0/0:24,3:25:5.15:0,5,440	1/1:8,15:22:24.72:444,25,0	0/1:35,8:34:99:162,0,747	0/1:6,8:14:16.36:266,0,16	0/0:11,1:9:4.77:0,5,208
chr10	80233873	.	AG	A	3829.35	PASS	AB=0.882;AC=25;AF=0.446;AN=56;BaseQRankSum=7.443;DP=669;FS=83.114;HRun=2;HaplotypeScore=175.5595;InbreedingCoeff=0.0536;MQ=34.48;MQ0=18;MQRankSum=-3.716;QD=7.63;ReadPosRankSum=-1.359;VQSLOD=-0.7116;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:29.31:0,29,575	1/1:9,0:9:26.20:157,26,0	0/0:10,0:6:18.06:0,18,232	0/0:6,0:5:14.97:0,15,167	1/1:20,2:22:56:404,56,0	0/0:11,0:11:27.09:0,27,384	0/0:20,3:18:30.10:0,30,420	0/1:33,10:36:20.89:450,0,21	0/1:41,7:42:98.47:98,0,1116	1/1:31,5:28:15.64:396,16,0	1/1:17,2:16:41.16:293,41,0	0/1:26,6:30:90.75:91,0,841	0/0:34,0:31:77.06:0,77,1049	0/0:24,0:24:54.05:0,54,727	0/1:28,3:26:99:274,0,105	0/1:29,6:32:99:151,0,817	0/1:12,1:12:79.75:98,0,80	0/1:14,1:12:42.21:42,0,225	0/1:21,5:22:82.98:247,0,83	1/1:20,1:20:53.44:399,53,0	0/1:15,2:16:98.05:98,0,190	0/1:16,4:20:94.74:95,0,615	0/1:21,2:22:31.06:31,0,504	0/0:27,2:27:29.67:0,30,656	1/1:22,2:23:50.14:300,50,0	0/1:45,4:40:42.97:43,0,1197	0/1:14,2:16:40.76:161,0,41	0/0:10,0:9:14.74:0,15,224
chr10	80233875	.	GA	G	5859.73	PASS	AB=0.802;AC=24;AF=0.429;AN=56;BaseQRankSum=5.141;DP=678;FS=68.643;HRun=2;HaplotypeScore=167.6787;InbreedingCoeff=0.1141;MQ=34.87;MQ0=19;MQRankSum=-3.594;QD=12.06;ReadPosRankSum=-1.051;VQSLOD=1.0906;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:39.10:0,39,627	1/1:1,9:10:30.08:373,30,0	0/0:10,0:6:18.06:0,18,251	0/0:7,0:5:15.05:0,15,206	1/1:4,18:22:56.14:666,56,0	0/0:11,0:11:29.99:0,30,388	0/0:24,0:18:30.10:0,30,424	0/1:30,16:38:90.83:532,0,91	0/1:48,3:44:13.53:14,0,1178	1/1:15,22:29:24.73:720,25,0	1/1:6,13:16:42.07:520,42,0	0/1:33,2:32:24.49:24,0,882	0/0:34,1:32:70.91:0,71,1091	0/0:25,0:25:57.04:0,57,751	0/1:18,14:27:98.45:467,0,98	0/1:34,2:32:29.41:29,0,859	0/1:7,5:11:78.52:188,0,79	0/1:9,6:12:99:161,0,186	0/1:14,10:20:99:417,0,100	1/1:6,14:19:52.87:623,53,0	0/1:10,7:16:99:179,0,149	0/1:20,0:20:15.09:15,0,642	0/0:20,3:22:12.83:0,13,546	0/0:28,1:27:43.57:0,44,635	1/1:10,15:24:31.35:620,31,0	0/1:45,4:40:21.03:21,0,1216	0/1:5,11:16:67.17:289,0,67	0/0:10,0:8:7.50:0,8,214
chr10	80233968	.	AT	A	6228.66	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=8.598;DP=435;FS=4.650;HRun=10;HaplotypeScore=63.9336;InbreedingCoeff=0.9587;MQ=68.50;MQ0=0;MQRankSum=-1.390;QD=20.49;ReadPosRankSum=0.889;VQSLOD=5.9120;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:44.98:389,45,0	1/1:3,10:14:29.03:240,29,0	0/0:7,0:7:12.02:0,12,123	0/0:8,0:9:2.75:0,3,45	1/1:0,20:20:56.99:495,57,0	1/1:2,18:21:53.01:449,53,0	0/0:7,0:6:11.99:0,12,119	1/1:11,26:37:71.90:610,72,0	0/0:17,0:18:35.92:0,36,370	1/1:5,15:19:44.98:389,45,0	1/1:2,15:17:44.94:384,45,0	0/0:15,0:14:26.99:0,27,272	1/1:3,9:11:20.98:182,21,0	1/1:2,17:19:50.99:443,51,0	1/1:4,10:14:29.98:260,30,0	0/0:15,0:15:42.11:0,42,464	1/1:1,15:16:41.99:365,42,0	1/1:2,7:8:21:182,21,0	1/1:7,13:20:41.96:356,42,0	1/1:2,17:19:44.98:391,45,0	1/1:2,8:10:24:208,24,0	0/0:17,0:17:51.06:0,51,537	0/0:8,0:8:21.06:0,21,232	0/0:10,0:11:29.91:0,30,306	1/1:3,17:20:50.98:443,51,0	0/0:12,1:13:13.05:0,13,372	1/1:1,17:18:50.99:443,51,0	0/0:11,0:11:30.08:0,30,331
chr10	80234952	.	GATATATATATATATATATATATATATATAT	G	603.66	PASS	AC=8;AF=0.250;AN=32;BaseQRankSum=3.481;DP=188;FS=21.765;HRun=0;HaplotypeScore=125.9969;InbreedingCoeff=0.4205;MQ=78.39;MQ0=6;MQRankSum=-3.579;QD=8.62;ReadPosRankSum=1.667;VQSLOD=0.8798;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,3:26:2.84:146,3,0	./.	0/0:9,0:4:3.01:0,3,32	0/0:21,0:10:9.01:0,9,262	./.	1/1:8,7:15:6.02:76,6,0	./.	0/0:6,0:6:12.03:0,12,533	0/0:4,0:5:6.02:0,6,518	./.	0/0:9,0:9:6.02:0,6,401	./.	1/1:11,6:17:6.02:255,6,0	1/1:5,7:12:3.01:233,3,0	0/0:7,0:7:3.01:0,3,64	./.	0/0:8,0:6:6.02:0,6,477	./.	./.	./.	0/0:2,0:2:3.01:0,3,111	0/0:2,0:2:3:0,3,26	./.	0/0:1,0:3:0.93:0,1,269	0/0:7,0:7:9.02:0,9,279	0/0:9,0:9:6.01:0,6,118	./.	./.
chr10	80234964	.	T	TC	86.55	PASS	AC=8;AF=0.235;AN=34;BaseQRankSum=3.725;DP=92;FS=15.877;HRun=0;HaplotypeScore=35.3812;InbreedingCoeff=0.4032;MQ=63.43;MQ0=8;MQRankSum=-2.975;QD=2.55;ReadPosRankSum=3.225;VQSLOD=0.6522;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,3:6:3.01:33,3,0	./.	0/0:7,0:1:3.01:0,3,32	0/0:20,0:5:9:0,9,89	./.	1/1:7,4:11:6.02:72,6,0	./.	0/0:6,0:5:15.04:0,15,193	0/0:3,0:3:5.81:0,6,54	./.	0/0:2,0:2:6.02:0,6,83	./.	1/1:6,2:8:6.02:81,6,0	1/1:7,2:9:1.55:4,2,0	0/0:1,0:1:3.01:0,3,41	./.	0/0:4,0:2:6.02:0,6,83	./.	./.	./.	0/0:1,0:1:3.01:0,3,42	0/0:1,0:1:3:0,3,26	0/0:1,0:1:3.01:0,3,41	0/0:2,0:2:2.84:0,3,14	0/0:5,0:4:9.02:0,9,109	0/0:2,0:2:6.01:0,6,68	./.	./.
chr10	80234996	.	A	ATGTGTGTGTG	1653.58	PASS	AC=18;AF=0.500;AN=36;BaseQRankSum=3.481;DP=216;FS=18.385;HRun=0;HaplotypeScore=79.1995;InbreedingCoeff=0.6861;MQ=33.67;MQ0=22;MQRankSum=-4.864;QD=13.78;ReadPosRankSum=-0.582;VQSLOD=-0.2683;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,6:30:3.01:62,3,0	./.	0/0:26,0:5:15.04:0,15,375	0/0:25,0:3:2.79:0,3,88	./.	1/1:20,0:18:6:118,6,0	0/0:1,0:2:3.01:0,3,30	1/1:13,0:11:12.03:392,12,0	0/0:5,0:5:15.03:0,15,308	1/1:3,0:3:6.02:160,6,0	./.	0/0:2,0:2:6.02:0,6,180	1/1:21,0:19:16.39:349,16,0	1/1:20,0:20:9.92:241,10,0	./.	0/0:3,0:3:6.02:0,6,180	./.	./.	1/1:2,0:2:3:26,3,0	./.	./.	0/0:4,0:6:18.03:0,18,376	0/0:4,0:4:12.04:0,12,324	0/0:9,0:9:9.03:0,9,270	1/1:5,0:3:6.02:90,6,0	1/1:5,0:5:12.04:360,12,0	./.	./.
chr10	80235575	.	G	GC	4861.17	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-10.574;DP=690;FS=1.749;HRun=0;HaplotypeScore=66.6175;InbreedingCoeff=0.9969;MQ=81.88;MQ0=1;MQRankSum=-1.110;QD=43.02;ReadPosRankSum=2.406;VQSLOD=5.5457;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,46:46:99:2051,129,0	0/0:13,0:13:39.13:0,39,545	0/0:21,0:21:56.75:0,57,706	0/0:23,0:23:66.08:0,66,875	0/0:23,0:23:69.22:0,69,949	1/1:1,23:24:60.20:947,60,0	0/0:27,0:27:81.21:0,81,1060	0/0:33,0:32:87.27:0,87,1183	0/0:25,0:25:75.23:0,75,1016	0/0:34,0:34:99:0,99,1356	0/0:13,0:13:39.12:0,39,527	0/0:24,0:24:69.20:0,69,930	1/1:0,23:23:63.21:1005,63,0	1/1:0,20:20:54.18:858,54,0	0/0:19,0:19:54.16:0,54,737	0/0:23,0:23:69.22:0,69,947	0/0:23,0:23:69.19:0,69,927	0/0:22,0:22:22.38:0,22,792	0/0:33,0:33:99:0,99,1328	0/0:19,0:19:54.17:0,54,737	0/0:27,0:27:81.27:0,81,1130	0/0:32,0:32:96.30:0,96,1323	0/0:32,0:32:93.29:0,93,1281	0/0:27,0:27:78.26:0,78,1090	0/0:25,0:25:75.23:0,75,1015	0/0:25,0:25:75.25:0,75,1049	0/0:28,0:27:84.26:0,84,1154	0/0:6,0:6:18.02:0,18,215
chr10	80236437	.	GTT	G	1103.34	PASS	AB=0.889;AC=7;AF=0.125;AN=56;BaseQRankSum=10.198;DP=626;FS=3.299;HRun=12;HaplotypeScore=91.5410;InbreedingCoeff=0.8367;MQ=63.27;MQ0=2;MQRankSum=-0.865;QD=11.86;ReadPosRankSum=2.657;VQSLOD=2.6078;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:24:34.24:145,34,0	0/0:6,0:6:15.05:0,15,224	0/0:15,0:12:21.61:0,22,323	0/0:13,0:6:10.69:0,11,125	0/0:31,0:33:86.77:0,87,1240	0/0:4,0:27:55.93:0,56,265	0/0:13,0:14:33.10:0,33,474	0/0:33,0:34:66.22:0,66,955	0/0:25,0:27:65.65:0,66,901	0/0:23,0:25:62.15:0,62,825	0/0:24,0:24:63.21:0,63,937	0/0:14,1:16:8.65:0,9,489	1/1:4,22:26:60.10:610,60,0	1/1:2,17:19:48.10:488,48,0	0/0:16,0:19:47.62:0,48,624	0/0:27,0:27:69.21:0,69,986	0/0:31,0:32:75.25:0,75,1103	0/0:35,0:35:93.22:0,93,1276	0/1:21,2:23:4.71:5,0,597	0/0:17,0:17:39.13:0,39,576	0/0:19,0:23:59.17:0,59,802	0/0:26,0:27:63.19:0,63,891	0/0:20,0:21:56.67:0,57,786	0/0:22,0:22:60.15:0,60,849	0/0:16,0:17:39.08:0,39,541	0/0:24,0:26:70.50:0,70,922	0/0:23,0:22:60.20:0,60,875	0/0:7,0:9:18.05:0,18,252
chr10	80237063	.	A	AT	723.71	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.365;DP=666;FS=2.431;HRun=6;HaplotypeScore=109.2428;InbreedingCoeff=0.9930;MQ=78.50;MQ0=0;MQRankSum=-3.811;QD=23.35;ReadPosRankSum=-2.820;VQSLOD=1.6290;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,26:31:66.21:819,66,0	0/0:8,0:8:20.49:0,20,121	0/0:25,0:25:56.05:0,56,539	0/0:15,0:15:27.13:0,27,364	0/0:27,0:26:56.56:0,57,407	0/0:30,0:30:73.76:0,74,418	0/0:15,0:15:39.08:0,39,398	0/0:30,0:30:71.20:0,71,358	0/0:30,0:30:84.19:0,84,856	0/0:30,0:30:73.24:0,73,367	0/0:24,0:24:66.61:0,67,371	0/0:20,0:20:54.11:0,54,544	0/0:29,0:29:80.11:0,80,459	0/0:31,0:31:61.96:0,62,428	0/0:27,0:27:67.95:0,68,366	0/0:15,0:15:42.08:0,42,422	0/0:27,0:27:72.83:0,73,414	0/0:21,0:21:55.22:0,55,311	0/0:20,0:20:31.37:0,31,255	0/0:36,0:36:46.72:0,47,465	0/0:12,0:12:32.10:0,32,185	0/0:29,0:29:75.16:0,75,765	0/0:32,0:32:90.20:0,90,916	0/0:22,0:22:63.13:0,63,637	0/0:16,0:16:31.06:0,31,169	0/0:29,0:29:84.15:0,84,842	0/0:24,0:24:67.10:0,67,386	0/0:11,0:11:33.08:0,33,337
chr10	80237856	.	A	AG	3971.57	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-11.668;DP=600;FS=0.444;HRun=0;HaplotypeScore=83.6073;InbreedingCoeff=0.9932;MQ=74.57;MQ0=0;MQRankSum=-2.153;QD=43.64;ReadPosRankSum=3.587;VQSLOD=4.0140;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:43.17:760,43,0	0/0:11,0:11:33.09:0,33,443	0/0:25,0:24:66.15:0,66,838	0/0:27,0:26:75.20:0,75,986	0/0:23,0:23:69.23:0,69,965	1/1:0,31:31:90.31:1439,90,0	0/0:15,0:15:45.15:0,45,627	0/0:34,0:34:96.31:0,96,1307	0/0:26,0:26:75.25:0,75,1045	0/0:19,0:19:54.17:0,54,740	0/0:27,0:27:81.27:0,81,1133	0/0:11,0:11:33.11:0,33,462	1/1:0,19:19:54.18:863,54,0	1/1:2,19:21:57.19:911,57,0	0/0:26,0:26:75.25:0,75,1048	0/0:18,0:18:54.17:0,54,737	0/0:16,0:16:45.15:0,45,629	0/0:5,0:5:15.05:0,15,210	0/0:24,0:24:72.22:0,72,965	0/0:38,0:38:99:0,111,1538	0/0:22,0:22:66.22:0,66,922	0/0:16,0:16:45.15:0,45,629	0/0:21,0:21:63.21:0,63,881	0/0:21,0:21:63.19:0,63,862	0/0:22,0:22:66.19:0,66,887	0/0:18,0:18:54.18:0,54,755	0/0:38,0:37:99:0,111,1491	0/0:6,0:6:18.06:0,18,252
chr10	80238640	.	TAC	T	214.58	PASS	AB=0.960;AC=24;AF=0.444;AN=54;BaseQRankSum=6.957;DP=627;FS=5.711;HRun=0;HaplotypeScore=144.5897;InbreedingCoeff=0.3692;MQ=59.72;MQ0=2;MQRankSum=-5.377;QD=0.57;ReadPosRankSum=-0.634;VQSLOD=2.3300;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:28:0.21:0,0,0	1/1:9,0:10:8.52:42,9,0	0/0:16,0:14:6.02:0,6,86	./.	0/1:37,0:37:0.19:0,0,0	0/0:16,0:19:5.99:0,6,50	0/0:30,0:30:14.89:0,15,638	0/1:30,0:29:3.44:3,0,10	0/0:37,0:37:63.16:0,63,935	1/1:23,0:23:6.65:107,7,0	0/1:22,0:23:0:1,0,0	0/1:19,4:23:6.83:7,0,319	0/0:16,0:17:17.93:0,18,183	0/0:18,0:18:6.02:0,6,88	1/1:30,0:29:2.87:15,3,0	0/1:25,3:28:13.68:14,0,655	0/1:20,0:20:1.38:9,0,1	1/1:6,0:6:5.68:28,6,0	1/1:9,0:9:0.31:20,0,0	0/1:23,0:23:0.02:0,0,0	0/0:19,0:18:0:0,0,0	0/0:19,0:19:38.94:0,39,523	0/1:29,1:29:7.07:7,0,573	0/0:26,0:26:9.55:0,10,436	1/1:20,0:20:4.07:15,4,0	0/0:20,0:19:35.24:0,35,249	1/1:34,0:34:5.03:90,5,0	0/0:7,0:7:5.98:0,6,55
chr10	80238664	.	CACACACACAT	C	2058.50	PASS	AB=0.983;AC=21;AF=0.375;AN=56;BaseQRankSum=8.478;DP=688;FS=3.420;HRun=0;HaplotypeScore=223.2728;InbreedingCoeff=0.3491;MQ=53.10;MQ0=7;MQRankSum=0.007;QD=6.26;ReadPosRankSum=-3.282;VQSLOD=2.3339;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:2.55:0,3,23	1/1:12,0:12:9.03:114,9,0	0/0:23,0:9:7.03:0,7,218	0/0:20,0:7:11.41:0,11,130	1/1:33,1:34:5.80:75,6,0	0/1:21,0:20:17.68:18,0,171	0/0:28,0:28:69.21:0,69,2807	1/1:34,0:32:36.37:386,36,0	0/0:35,0:35:62:0,62,3461	1/1:26,1:27:35.73:625,36,0	1/1:25,0:25:4.38:22,4,0	0/0:28,0:28:65.18:0,65,1787	0/1:20,0:20:12.59:13,0,608	0/1:24,0:24:9.72:10,0,254	0/0:30,0:29:0.39:0,0,2	0/0:27,0:27:69.16:0,69,2645	0/1:16,0:16:12.21:66,0,12	1/1:9,0:9:8.94:93,9,0	1/1:16,0:15:30.58:290,31,0	0/1:27,3:30:17.69:32,0,18	0/0:25,0:23:0.47:0,0,1	0/0:22,0:21:62.90:0,63,2193	0/0:36,0:35:84.25:0,84,3183	0/0:28,0:28:60.17:0,60,2305	0/1:28,0:28:47.98:223,0,48	0/0:18,0:17:22.15:0,22,1472	0/1:32,1:33:52.08:274,0,52	0/0:9,0:9:12.02:0,12,352
chr10	80238666	.	CACACACAT	C	4256.05	PASS	AB=0.809;AC=27;AF=0.482;AN=56;BaseQRankSum=8.501;DP=682;FS=10.118;HRun=0;HaplotypeScore=199.7417;InbreedingCoeff=0.5126;MQ=54.83;MQ0=6;MQRankSum=-0.805;QD=11.08;ReadPosRankSum=-3.263;VQSLOD=2.5256;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:30:0.13:0,0,0	1/1:1,11:12:9.03:253,9,0	0/0:22,0:9:7.01:0,7,143	0/0:20,0:7:2.97:0,3,58	1/1:5,26:31:3.23:16,3,0	0/1:20,0:19:21.04:21,0,113	0/0:27,0:27:69.16:0,69,2235	1/1:5,27:31:76.24:811,76,0	0/0:33,0:33:60.90:0,61,2845	1/1:3,24:27:74.89:1125,75,0	0/1:2,23:25:0.09:2,0,0	0/0:27,0:27:61.99:0,62,1454	0/1:20,0:20:12.43:12,0,454	0/1:23,0:23:9.48:9,0,202	1/1:30,0:29:2.99:24,3,0	0/0:27,0:27:69.16:0,69,2162	1/1:15,1:16:7.42:123,7,0	1/1:2,7:9:8.95:186,9,0	1/1:2,14:15:41.93:499,42,0	1/1:7,22:29:1.68:16,2,0	0/0:5,19:22:0:0,0,0	0/0:23,0:22:62.89:0,63,1788	0/0:38,0:37:90.21:0,90,2564	0/0:28,0:28:60.11:0,60,1839	1/1:21,9:30:45.44:510,45,0	0/0:18,0:17:42.08:0,42,1160	0/1:3,29:32:14.17:648,0,14	0/0:11,0:11:18.01:0,18,383
chr10	80238668	.	CACACAT	C	2789.89	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=9.931;DP=661;FS=11.368;HRun=0;HaplotypeScore=186.3902;InbreedingCoeff=0.5506;MQ=55.75;MQ0=6;MQRankSum=-1.299;QD=7.17;ReadPosRankSum=-3.137;VQSLOD=1.4332;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:27:0.21:0,0,0	1/1:12,0:12:8.64:150,9,0	0/0:22,0:9:6.54:0,7,120	0/1:22,0:8:1.27:1,0,42	1/1:29,0:30:1.61:4,2,0	0/1:18,0:17:20.91:21,0,73	0/0:26,0:26:46.01:0,46,1734	1/1:28,0:26:76.16:591,76,0	0/0:32,0:32:43.88:0,44,2265	1/1:26,0:26:63.95:773,64,0	0/1:25,0:25:0:2,0,0	0/0:29,0:29:61.99:0,62,1185	0/1:20,0:20:12.66:13,0,290	0/1:24,0:24:9.74:10,0,150	1/1:1,27:27:3.01:70,3,0	0/0:28,0:28:72.16:0,72,1797	1/1:13,0:13:7.83:90,8,0	1/1:9,0:9:8.95:117,9,0	1/1:16,0:15:41.38:363,41,0	1/1:27,0:27:2.09:17,2,0	0/0:23,0:21:0:0,0,0	0/0:22,0:21:62.89:0,63,1504	0/0:37,0:36:90.05:0,90,2008	0/0:28,0:28:57.12:0,57,1450	1/1:30,0:30:43.81:371,44,0	0/0:17,0:16:42.09:0,42,846	1/1:32,0:32:5.77:380,6,0	0/0:8,0:8:18.01:0,18,318
chr10	80238674	.	TACATAG	T	335.07	PASS	AB=0.959;AC=16;AF=0.296;AN=54;BaseQRankSum=8.623;DP=654;FS=20.673;HRun=0;HaplotypeScore=195.8416;InbreedingCoeff=0.1464;MQ=57.65;MQ0=6;MQRankSum=-8.086;QD=1.31;ReadPosRankSum=3.464;VQSLOD=1.4747;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:24:0.21:0,0,0	1/1:11,0:12:8.39:53,8,0	0/0:25,0:9:16.22:0,16,147	0/0:25,0:11:1.31:0,1,112	0/0:29,0:29:2.89:0,3,47	0/1:10,0:17:23.96:24,0,34	0/0:29,0:29:61.68:0,62,2091	0/0:29,0:27:30.55:0,31,560	0/0:33,0:33:86.80:0,87,2565	0/1:26,0:26:88.92:89,0,231	0/1:23,1:24:0:2,0,0	0/0:27,0:27:63.22:0,63,1688	0/1:18,0:18:54.40:54,0,165	0/1:27,0:27:28.02:28,0,117	1/1:28,0:27:3.01:35,3,0	0/0:30,0:30:81.22:0,81,2180	0/1:13,0:13:6.46:6,0,62	1/1:7,0:8:8.60:52,9,0	0/0:16,0:15:2.59:0,3,169	0/0:25,0:25:3.38:0,3,18	./.	0/0:24,0:23:69.22:0,69,1796	0/0:36,0:35:89.76:0,90,2456	0/0:23,0:23:60.19:0,60,1811	0/1:26,0:26:48.45:48,0,223	0/0:19,0:18:53.78:0,54,1089	0/1:31,0:31:30.24:90,0,30	0/0:8,0:8:18.04:0,18,421
chr10	80238685	.	A	ATC	78.19	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=4.133;DP=654;FS=6.072;HRun=0;HaplotypeScore=170.8546;InbreedingCoeff=0.5558;MQ=64.18;MQ0=4;MQRankSum=-2.509;QD=1.60;ReadPosRankSum=-1.824;VQSLOD=1.6304;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:2.99:0,3,24	0/0:11,0:11:7.62:0,8,132	0/0:26,0:10:2.12:0,2,55	0/0:33,0:15:9.84:0,10,73	0/0:30,0:30:14.95:0,15,187	1/1:17,7:23:14.69:166,15,0	0/0:23,0:23:66.21:0,66,983	0/0:28,0:26:76.12:0,76,1110	0/0:31,0:31:87.18:0,87,1219	0/0:26,0:26:71.40:0,71,998	0/1:25,0:25:0.05:0,0,0	0/0:25,0:25:63.17:0,63,900	0/0:19,0:19:8.34:0,8,151	0/0:24,0:24:8.95:0,9,109	0/0:30,0:29:15.01:0,15,166	0/0:26,0:26:75.23:0,75,1101	0/0:11,0:11:18.03:0,18,250	0/0:8,0:8:9:0,9,113	0/0:13,0:13:36.11:0,36,514	0/0:30,0:30:17.83:0,18,232	0/0:20,0:20:15.01:0,15,165	0/0:24,0:23:69.21:0,69,1011	0/0:33,0:33:90.22:0,90,1265	0/0:22,0:22:60.64:0,61,875	0/0:28,0:28:48.62:0,49,712	0/0:15,0:14:41.90:0,42,581	0/0:32,0:32:42.08:0,42,573	0/0:9,0:9:24.01:0,24,334
chr10	80238700	.	TGTGA	T	516.42	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=5.504;DP=663;FS=5.615;HRun=0;HaplotypeScore=181.3828;InbreedingCoeff=0.7560;MQ=68.69;MQ0=2;MQRankSum=-4.028;QD=6.62;ReadPosRankSum=1.624;VQSLOD=2.2806;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:11.98:0,12,312	0/0:12,0:12:12.01:0,12,287	0/0:20,0:14:6.85:0,7,71	0/0:32,0:19:6.02:0,6,149	0/0:32,0:32:38.60:0,39,1003	1/1:5,18:23:12.04:228,12,0	0/0:22,0:22:57.20:0,57,1478	0/0:28,0:27:81.23:0,81,1896	0/0:30,0:30:87.28:0,87,2233	0/0:27,0:27:69.24:0,69,1840	0/0:22,0:22:14.31:0,14,387	0/0:28,0:28:75.25:0,75,1944	1/1:1,21:22:14.96:284,15,0	1/1:0,26:26:8.94:132,9,0	0/0:30,0:29:27.09:0,27,676	0/0:30,0:30:81.26:0,81,2096	0/0:12,0:12:23.93:0,24,577	0/1:7,0:7:5.26:5,0,129	0/0:13,0:13:36.12:0,36,971	0/0:26,0:26:36.09:0,36,895	0/0:24,0:24:36.12:0,36,930	0/0:26,0:25:72.24:0,72,1850	0/0:32,0:32:87.28:0,87,2260	0/0:21,0:21:53.77:0,54,1333	0/0:31,0:31:66.20:0,66,1711	0/0:20,0:20:57.19:0,57,1453	0/0:33,0:33:53.99:0,54,1377	0/0:7,0:7:21.07:0,21,567
chr10	80238835	.	T	TAC	2686.03	PASS	AB=0.780;AC=26;AF=0.500;AN=52;BaseQRankSum=0.393;DP=635;FS=12.465;HRun=0;HaplotypeScore=127.7747;InbreedingCoeff=0.1916;MQ=60.14;MQ0=25;MQRankSum=-0.260;QD=7.01;ReadPosRankSum=-2.435;VQSLOD=2.2740;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:21:5.04:32,5,0	0/1:5,7:12:41.89:246,0,42	./.	./.	0/1:16,13:29:42.08:246,0,42	0/0:12,0:27:28.84:0,29,139	0/0:17,0:19:22.36:0,22,274	1/1:29,0:29:15.40:114,15,0	0/0:19,0:19:4.33:0,4,251	1/1:13,10:23:20.73:307,21,0	1/1:11,9:22:9.03:135,9,0	0/1:14,1:17:21.22:21,0,168	0/0:8,0:18:18.86:0,19,89	0/0:9,0:20:14.20:0,14,70	0/1:15,3:19:11.59:166,0,12	0/0:23,0:25:26.88:0,27,267	1/1:15,4:19:20.83:246,21,0	0/1:7,4:11:27.10:160,0,27	0/1:13,1:14:74.31:74,0,84	1/1:15,15:31:15.05:225,15,0	0/1:14,7:22:54.11:78,0,54	0/0:24,0:25:33.97:0,34,424	0/0:15,0:16:11.86:0,12,113	0/1:21,0:21:3.15:3,0,158	0/1:13,14:28:39.04:288,0,39	1/1:29,0:29:29.34:201,29,0	0/1:14,14:27:9.06:277,0,9	1/1:6,0:6:5.97:45,6,0
chr10	80238861	.	C	CACACACAA	1285.34	PASS	AB=0.862;AC=5;AF=0.089;AN=56;BaseQRankSum=-2.350;DP=708;FS=4.939;HRun=0;HaplotypeScore=200.9622;InbreedingCoeff=0.3342;MQ=54.25;MQ0=26;MQRankSum=0.792;QD=17.14;ReadPosRankSum=0.180;VQSLOD=2.8112;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:70.49:70,0,81	0/0:11,0:11:20.99:0,21,272	0/0:54,0:13:35.89:0,36,343	0/0:54,0:17:24.95:0,25,271	0/0:30,0:29:53.90:0,54,532	0/0:28,0:28:51.03:0,51,779	0/0:19,0:19:45.09:0,45,824	0/0:26,0:26:59.72:0,60,495	0/0:21,0:21:54.04:0,54,878	0/0:26,0:26:39.90:0,40,423	0/0:21,0:21:32.86:0,33,259	0/0:18,0:18:48.03:0,48,752	0/0:18,0:18:35.78:0,36,504	0/0:25,0:25:41.93:0,42,518	0/0:26,0:26:46.55:0,47,498	0/0:25,0:25:56.97:0,57,919	0/0:24,0:25:47.49:0,47,359	0/0:9,0:9:17.89:0,18,134	0/0:16,0:16:40.14:0,40,485	0/0:36,0:36:65.83:0,66,527	0/0:24,0:23:41.95:0,42,456	0/0:30,0:30:80.89:0,81,1384	0/0:22,0:21:53.97:0,54,607	0/1:18,0:18:12.53:13,0,447	0/0:32,0:32:53.23:0,53,553	0/1:10,22:33:14.41:1196,0,14	0/0:37,0:36:72.67:0,73,629	1/1:5,0:5:11.76:124,12,0
chr10	80240081	.	ATACAGTG	A	3823.72	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.691;DP=564;FS=23.401;HRun=0;HaplotypeScore=126.8765;InbreedingCoeff=0.9746;MQ=85.68;MQ0=0;MQRankSum=-11.227;QD=56.23;ReadPosRankSum=2.776;VQSLOD=1.5254;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,4:5:9.03:230,9,0	0/0:11,0:11:30.10:0,30,1186	0/0:23,0:23:51.09:0,51,1606	0/0:17,0:17:51.04:0,51,1419	0/0:31,0:31:90.27:0,90,3240	1/1:2,20:22:51.18:1306,51,0	0/0:17,0:17:45.15:0,45,1591	0/0:39,0:39:99:0,108,3758	0/0:20,0:20:60.21:0,60,2234	0/0:35,0:35:99:0,102,3998	0/0:31,0:31:90.31:0,90,3529	0/0:26,0:26:72.25:0,72,2740	1/1:2,18:20:42.14:1075,42,0	1/1:1,20:21:48.16:1212,48,0	0/0:23,0:23:66.20:0,66,2382	0/0:20,0:20:57.20:0,57,2235	0/0:5,0:5:15.05:0,15,571	0/0:6,0:6:18.04:0,18,598	0/0:19,0:19:54.18:0,54,1908	0/0:24,0:24:72.25:0,72,2773	0/0:15,0:15:45.15:0,45,1731	0/0:17,0:17:51.16:0,51,1903	0/0:24,0:24:69.22:0,69,2516	0/0:6,0:6:18.06:0,18,706	0/0:19,0:19:54.19:0,54,2137	0/0:19,0:19:57.20:0,57,2198	0/0:34,0:34:93.30:0,93,3450	0/0:15,0:15:39.13:0,39,1399
chr10	80240267	.	T	TGG	1692.47	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=1.333;DP=510;FS=2.052;HRun=7;HaplotypeScore=90.9508;InbreedingCoeff=0.9426;MQ=78.93;MQ0=0;MQRankSum=-5.195;QD=36.01;ReadPosRankSum=-0.579;VQSLOD=3.3022;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,5:8:18.06:293,18,0	0/0:6,0:6:18.05:0,18,206	0/0:24,0:22:7.17:0,7,403	0/0:20,0:17:11.95:0,12,361	0/0:23,0:23:54.15:0,54,624	1/1:2,10:12:33.11:529,33,0	0/0:19,0:19:48.13:0,48,558	0/0:28,0:28:60.08:0,60,667	0/0:11,0:11:27.07:0,27,314	0/0:29,0:29:78.03:0,78,838	0/0:31,0:31:78.19:0,78,875	0/0:17,0:17:48.12:0,48,549	1/1:6,7:13:33.07:489,33,0	1/1:5,9:14:33.11:540,33,0	0/0:19,0:19:42.12:0,42,500	0/0:20,0:20:57.06:0,57,624	0/0:17,0:17:33.09:0,33,375	0/0:10,0:10:21.06:0,21,243	0/0:21,0:21:57.17:0,57,676	0/0:24,0:24:54.15:0,54,623	0/0:7,0:7:15.04:0,15,174	0/0:30,0:30:90.24:0,90,1028	0/0:28,0:28:72.21:0,72,837	0/0:3,0:3:9.03:0,9,105	0/0:22,0:22:60.16:0,60,683	0/0:16,0:16:48.14:0,48,559	0/0:30,0:29:78.23:0,78,907	0/0:8,0:8:24.07:0,24,280
chr10	80240301	.	C	CTTTTT	10537.68	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=8.112;DP=474;FS=0.405;HRun=8;HaplotypeScore=101.8262;InbreedingCoeff=0.9489;MQ=66.04;MQ0=0;MQRankSum=-10.112;QD=34.66;ReadPosRankSum=-1.281;VQSLOD=2.1702;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:9:16.89:106,17,0	1/1:0,7:9:21.07:590,21,0	0/0:14,0:13:33.09:0,33,532	0/0:14,0:11:21.42:0,21,299	1/1:16,10:29:57.15:1308,57,0	1/1:2,0:9:21.05:221,21,0	0/0:14,0:14:39.08:0,39,615	1/1:6,16:22:45.15:1085,45,0	0/0:11,0:11:33.09:0,33,536	1/1:4,15:24:60.19:1495,60,0	1/1:10,13:25:33.07:850,33,0	0/0:13,0:13:39.12:0,39,640	1/1:2,0:14:20.34:112,20,0	1/1:5,0:20:34.33:181,34,0	1/1:7,14:22:36.11:928,36,0	0/0:18,0:18:54.16:0,54,895	1/1:4,6:12:12.04:276,12,0	1/1:3,6:9:3.01:87,3,0	1/1:8,8:18:30.09:705,30,0	1/1:10,17:31:45.04:1001,45,0	1/1:2,2:4:6.02:173,6,0	0/0:27,0:27:69.14:0,69,1102	0/0:24,0:24:63.12:0,63,994	0/0:5,0:5:15.05:0,15,257	1/1:8,12:21:30.10:850,30,0	0/0:20,0:20:51.13:0,51,850	1/1:12,12:24:20.92:570,21,0	0/0:10,0:10:27.09:0,27,454
chr10	80241662	.	A	AT	8090.83	PASS	AC=38;AF=0.704;AN=54;BaseQRankSum=-5.873;DP=283;FS=0.000;HRun=6;HaplotypeScore=26.3521;InbreedingCoeff=0.9036;MQ=71.79;MQ0=0;MQRankSum=-1.486;QD=32.89;ReadPosRankSum=1.158;VQSLOD=4.0803;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:9:24.08:302,24,0	1/1:0,6:6:18.06:226,18,0	0/0:6,0:6:11.96:0,12,108	0/0:3,0:3:9.02:0,9,90	1/1:1,11:12:33.11:415,33,0	1/1:0,7:7:21.07:264,21,0	0/0:5,0:5:12.02:0,12,122	1/1:8,38:46:99:1381,114,0	0/0:6,0:6:15.03:0,15,153	1/1:4,12:16:42.13:524,42,0	1/1:3,12:15:42.13:528,42,0	0/0:4,0:4:9.02:0,9,92	1/1:1,6:7:15.05:188,15,0	1/1:0,3:3:9.03:113,9,0	1/1:2,4:6:12.04:151,12,0	0/0:6,0:6:18.03:0,18,178	1/1:3,10:13:33.08:399,33,0	1/1:1,14:16:45.14:557,45,0	1/1:1,9:10:27.09:339,27,0	1/1:2,15:17:45.14:566,45,0	1/1:0,2:1:6.02:75,6,0	0/0:2,0:2:6.01:0,6,61	0/0:5,0:5:15.03:0,15,153	./.	1/1:2,11:13:39.10:466,39,0	1/1:0,17:17:51.14:627,51,0	1/1:1,21:22:63.13:773,63,0	1/1:1,8:9:15.05:196,15,0
chr10	80241761	.	T	TTA	6802.48	PASS	AB=0.733;AC=25;AF=0.463;AN=54;BaseQRankSum=-1.917;DP=279;FS=2.599;HRun=0;HaplotypeScore=59.0124;InbreedingCoeff=0.7968;MQ=58.48;MQ0=0;MQRankSum=3.380;QD=37.17;ReadPosRankSum=-0.224;VQSLOD=6.6799;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:15.24:0,15,70	1/1:0,5:5:15.05:253,15,0	./.	0/0:6,0:1:3.01:0,3,38	1/1:2,17:19:51.17:813,51,0	0/0:9,0:9:17.58:0,18,122	0/0:4,0:4:12.04:0,12,154	1/1:13,21:34:69.24:1162,69,0	0/0:4,0:4:12.04:0,12,153	1/1:3,12:15:41.73:668,42,0	0/1:7,4:11:20.55:235,0,21	0/0:4,0:4:12.03:0,12,141	0/0:5,0:5:13.72:0,14,59	0/0:2,0:2:5.49:0,5,24	1/1:2,5:7:18.06:290,18,0	0/0:2,0:2:6.02:0,6,77	1/1:4,6:9:18.02:273,18,0	1/1:6,6:12:18.06:304,18,0	1/1:7,13:20:42.14:709,42,0	1/1:5,12:17:39.12:619,39,0	1/1:2,1:3:6.02:75,6,0	0/0:4,0:4:9.03:0,9,116	0/0:7,0:7:21.07:0,21,270	0/0:1,0:1:3.01:0,3,39	1/1:3,12:15:45.15:746,45,0	0/0:16,0:16:36.11:0,36,451	1/1:4,11:15:39.13:655,39,0	0/0:16,0:16:24.08:0,24,302
chr10	80241762	.	TA	T	41.31	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=3.201;DP=274;FS=0.000;HRun=1;HaplotypeScore=76.9002;InbreedingCoeff=0.4931;MQ=56.56;MQ0=0;MQRankSum=-4.165;QD=3.76;ReadPosRankSum=1.112;VQSLOD=0.1403;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,7:11:23.13:133,23,0	0/0:5,0:5:14.94:0,15,116	./.	0/0:6,0:1:3.01:0,3,33	0/0:19,0:19:44.84:0,45,367	0/0:9,0:9:20.32:0,20,124	0/0:4,0:4:12.04:0,12,192	0/0:32,0:32:95.81:0,96,878	0/0:4,0:4:12.04:0,12,192	0/0:15,0:15:41.85:0,42,337	0/0:10,0:10:26.98:0,27,285	0/0:4,0:4:12.04:0,12,192	0/0:5,0:5:12.54:0,13,46	0/0:2,0:2:4.99:0,5,18	0/0:6,0:6:14.94:0,15,116	0/0:2,0:2:6.02:0,6,96	0/0:10,0:9:23.93:0,24,219	0/0:12,0:12:29.95:0,30,285	0/0:20,0:20:53.86:0,54,466	0/0:16,0:16:42.36:0,42,354	0/0:3,0:3:3.47:0,3,26	0/0:4,0:4:12.04:0,12,180	0/0:7,0:7:21.07:0,21,336	0/0:1,0:1:3.01:0,3,48	0/0:15,0:15:42.31:0,42,327	0/0:17,0:17:45.11:0,45,680	0/0:15,0:15:41.88:0,42,351	0/0:16,0:16:24.08:0,24,383
chr10	80241764	.	TATATATACATG	T	422.61	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.617;DP=270;FS=1.628;HRun=0;HaplotypeScore=126.7833;InbreedingCoeff=0.4816;MQ=56.42;MQ0=0;MQRankSum=-3.902;QD=38.42;ReadPosRankSum=2.047;VQSLOD=3.4327;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,7:11:18.06:513,18,0	0/0:5,0:5:15.05:0,15,677	0/0:4,0:2:3.01:0,3,33	0/0:6,0:1:3.01:0,3,84	0/0:19,0:19:47.89:0,48,2113	0/0:9,0:9:24.03:0,24,839	0/0:4,0:4:12.04:0,12,607	0/0:31,0:31:93.06:0,93,3280	0/0:4,0:4:12.04:0,12,515	0/0:15,0:15:45.15:0,45,1687	0/0:9,0:9:24.08:0,24,837	0/0:4,0:4:12.04:0,12,597	0/0:5,0:5:15:0,15,132	0/0:2,0:2:6:0,6,52	0/0:6,0:6:15.05:0,15,766	0/0:3,0:3:9.03:0,9,499	0/0:10,0:9:24.01:0,24,954	0/0:13,0:13:33.11:0,33,1232	0/0:19,0:19:53.92:0,54,2367	0/0:15,0:15:41.93:0,42,1839	0/0:3,0:3:9.03:0,9,397	0/0:3,0:3:9.03:0,9,534	0/0:7,0:7:21.07:0,21,1036	0/0:1,0:1:3.01:0,3,178	0/0:15,0:15:45.13:0,45,1941	0/0:17,0:17:48.16:0,48,1719	0/0:14,0:14:38.80:0,39,1643	0/0:16,0:16:24.08:0,24,956
chr10	80241769	.	ATACATG	A	632	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.064;DP=267;FS=3.026;HRun=0;HaplotypeScore=102.1711;InbreedingCoeff=0.6486;MQ=54.30;MQ0=0;MQRankSum=-1.935;QD=37.18;ReadPosRankSum=-1.124;VQSLOD=3.4494;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:18.06:258,18,0	0/0:5,0:5:11.27:0,11,321	0/0:3,0:1:3:0,3,26	0/0:6,0:1:3.01:0,3,66	0/0:21,0:21:21.77:0,22,1133	0/0:10,0:10:18.93:0,19,243	0/0:5,0:5:15.05:0,15,365	0/0:30,0:30:52.57:0,53,1580	0/0:5,0:5:15.04:0,15,368	0/0:16,0:16:43.31:0,43,744	0/0:9,0:9:13.50:0,14,421	0/0:5,0:5:15.04:0,15,398	1/1:0,5:5:15.05:359,15,0	1/1:0,2:2:6.02:144,6,0	0/0:7,0:7:18.06:0,18,452	0/0:3,0:3:9.03:0,9,303	0/0:9,0:8:1.08:0,1,490	0/0:10,0:10:18.97:0,19,594	0/0:19,0:19:21.62:0,22,1167	0/0:13,0:13:14.18:0,14,945	0/0:3,0:3:9.03:0,9,280	0/0:3,0:3:9.03:0,9,324	0/0:8,0:8:24.08:0,24,674	0/0:1,0:1:3.01:0,3,108	0/0:16,0:16:38.55:0,39,1017	0/0:17,0:17:30.66:0,31,625	0/0:15,0:15:11.75:0,12,876	0/0:11,0:11:23.44:0,23,361
chr10	80241775	.	GTA	G	586.44	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=0.347;DP=283;FS=13.124;HRun=0;HaplotypeScore=88.2120;InbreedingCoeff=0.7963;MQ=55.15;MQ0=0;MQRankSum=-2.102;QD=13.33;ReadPosRankSum=1.567;VQSLOD=2.8107;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:15.94:66,16,0	0/0:6,0:6:15.04:0,15,164	./.	0/0:7,0:2:2.97:0,3,20	0/0:21,1:22:28.91:0,29,498	0/0:10,0:10:17.94:0,18,164	0/0:6,0:6:12.04:0,12,197	0/0:34,0:34:75.61:0,76,753	0/0:5,0:5:12.03:0,12,165	0/0:18,1:19:2.05:0,2,342	0/0:10,0:10:21.06:0,21,230	0/0:4,0:4:12.04:0,12,198	1/1:6,0:6:12.48:47,12,0	1/1:2,0:2:5.09:19,5,0	0/0:8,0:8:21.06:0,21,232	0/0:3,0:3:9.03:0,9,146	0/0:10,0:9:24.05:0,24,280	0/0:9,0:9:24.07:0,24,269	0/0:19,0:19:48.11:0,48,522	0/0:14,0:13:42.06:0,42,475	0/0:5,0:5:12.04:0,12,140	0/0:3,0:3:9.03:0,9,149	0/0:9,0:9:21.07:0,21,347	0/0:2,0:2:6.02:0,6,99	0/0:16,0:16:39.11:0,39,439	1/1:3,11:15:35.95:426,36,0	0/0:16,0:16:39.12:0,39,462	1/1:6,7:13:15.05:188,15,0
chr10	80241816	.	ATTTG	A	1792.54	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=0.943;DP=368;FS=2.459;HRun=0;HaplotypeScore=112.9444;InbreedingCoeff=0.9215;MQ=67.99;MQ0=0;MQRankSum=-6.572;QD=42.68;ReadPosRankSum=0.120;VQSLOD=4.0926;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:17:36.08:626,36,0	0/0:5,0:5:15.04:0,15,341	0/0:7,0:7:21.07:0,21,455	0/0:4,0:4:0.89:0,1,2	0/0:21,0:21:57.20:0,57,1431	1/1:0,9:9:24.08:441,24,0	0/0:11,0:11:33.11:0,33,858	0/0:43,0:43:99:0,114,2968	0/0:13,0:13:39.13:0,39,1030	0/0:21,0:20:63.22:0,63,1651	0/0:13,0:13:39.13:0,39,1011	0/0:7,0:7:21.07:0,21,546	1/1:0,11:11:33.11:607,33,0	1/1:0,5:5:15.05:275,15,0	0/0:10,0:10:24.08:0,24,596	0/0:5,0:5:15.05:0,15,396	0/0:16,0:16:48.16:0,48,1241	0/0:8,0:8:21.07:0,21,539	0/0:27,0:27:75.26:0,75,1915	0/0:23,0:22:60.21:0,60,1554	0/0:10,0:10:27.09:0,27,699	0/0:7,0:7:21.07:0,21,551	0/0:10,0:10:30.10:0,30,786	0/0:3,0:3:9.03:0,9,230	0/0:20,0:20:54.18:0,54,1364	0/0:15,0:15:45.15:0,45,1182	0/0:20,0:20:57.20:0,57,1461	0/0:7,0:7:18.06:0,18,475
chr10	80241827	.	AT	A	6242.32	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=4.048;DP=392;FS=17.264;HRun=7;HaplotypeScore=71.9376;InbreedingCoeff=0.9653;MQ=77.35;MQ0=0;MQRankSum=0.066;QD=26.45;ReadPosRankSum=1.709;VQSLOD=3.6295;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:36.06:0,36,403	1/1:1,3:4:9.02:92,9,0	0/0:16,0:16:43.68:0,44,511	0/0:3,0:3:5.50:0,6,47	1/1:1,19:20:48.10:486,48,0	0/0:10,0:10:27.08:0,27,309	0/0:13,0:13:39.12:0,39,491	1/1:5,29:34:87.17:874,87,0	0/0:16,0:16:48.13:0,48,579	1/1:3,22:25:66.14:668,66,0	1/1:2,14:16:42.09:428,42,0	0/0:8,0:8:24.06:0,24,289	0/0:14,0:14:36.09:0,36,399	0/0:8,0:8:24.07:0,24,275	1/1:1,8:9:27.05:268,27,0	0/0:8,0:8:24.08:0,24,302	1/1:0,21:21:54.12:551,54,0	1/1:0,10:10:27.06:275,27,0	1/1:3,18:21:54.10:538,54,0	1/1:2,19:21:54.12:546,54,0	1/1:0,10:10:27.06:274,27,0	0/0:8,0:8:24.08:0,24,302	0/0:11,0:11:27.09:0,27,340	0/0:3,0:3:9.03:0,9,113	1/1:1,20:21:60.13:605,60,0	0/0:17,0:17:51.16:0,51,630	1/1:2,22:24:63.13:636,63,0	0/0:7,0:7:18.06:0,18,226
chr10	80242266	.	A	ATTTGTTTG	15694.47	PASS	AB=0.680;AC=33;AF=0.589;AN=56;BaseQRankSum=0.640;DP=727;FS=5.276;HRun=0;HaplotypeScore=179.6058;InbreedingCoeff=0.7386;MQ=63.92;MQ0=2;MQRankSum=-9.298;QD=32.90;ReadPosRankSum=-3.994;VQSLOD=3.4724;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:28:39.13:1148,39,0	1/1:7,2:10:9.02:273,9,0	0/0:36,0:31:39.08:0,39,695	0/0:27,0:22:6.40:0,6,181	1/1:13,10:25:33.07:895,33,0	0/1:2,0:26:99:182,0,109	0/0:21,0:21:45.15:0,45,1052	1/1:40,0:46:45.12:1175,45,0	0/0:26,0:26:33.11:0,33,780	1/1:10,9:21:27.05:843,27,0	1/1:11,12:24:45.15:1722,45,0	0/0:28,0:28:66.21:0,66,1571	0/1:7,0:37:85.17:357,0,85	1/1:3,0:29:52.33:351,52,0	1/1:23,10:35:39.12:1480,39,0	0/0:18,0:18:39.12:0,39,913	1/1:19,6:27:15.05:463,15,0	1/1:7,3:10:6.02:243,6,0	1/1:18,3:22:24.06:676,24,0	1/1:12,12:27:42.13:1422,42,0	1/1:12,2:18:18.03:545,18,0	0/0:23,0:23:45.15:0,45,1119	0/0:16,0:17:39.13:0,39,943	0/0:32,0:32:75.22:0,75,1687	1/1:14,12:29:36.12:1405,36,0	0/1:28,0:29:46.80:47,0,1312	1/1:13,20:34:60.68:2470,61,0	0/0:22,0:22:51.18:0,51,1296
chr10	80243702	.	GC	G	2969.30	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.067;DP=535;FS=1.456;HRun=2;HaplotypeScore=62.3022;InbreedingCoeff=0.9987;MQ=77.77;MQ0=0;MQRankSum=-3.235;QD=35.35;ReadPosRankSum=2.518;VQSLOD=4.1844;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:60.19:778,60,0	0/0:10,0:10:27.09:0,27,405	0/0:16,0:15:42.02:0,42,566	0/0:13,0:13:25.75:0,26,359	0/0:29,0:29:87.20:0,87,1235	1/1:0,27:27:78.25:1012,78,0	0/0:13,0:13:39.12:0,39,566	0/0:31,0:31:93.28:0,93,1353	0/0:23,0:23:69.23:0,69,1034	0/0:15,0:15:45.15:0,45,674	0/0:25,0:25:69.23:0,69,1033	0/0:16,0:16:48.16:0,48,719	1/1:0,15:15:45.15:583,45,0	1/1:1,19:20:60.15:756,60,0	0/0:32,0:32:93.31:0,93,1367	0/0:14,0:14:39.13:0,39,584	0/0:12,0:12:27.09:0,27,405	0/0:11,0:11:30.10:0,30,450	0/0:19,0:19:57.19:0,57,848	0/0:19,0:19:57.18:0,57,830	0/0:19,0:19:48.13:0,48,677	0/0:13,0:13:36.11:0,36,521	0/0:20,0:20:60.20:0,60,895	0/0:11,0:11:33.11:0,33,495	0/0:17,0:17:51.16:0,51,746	0/0:26,0:26:78.26:0,78,1166	0/0:29,0:29:80.97:0,81,1186	0/0:18,0:18:54.10:0,54,781
chr10	80243774	.	C	CT	1834.47	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.227;DP=520;FS=1.797;HRun=5;HaplotypeScore=114.5922;InbreedingCoeff=0.9321;MQ=76.83;MQ0=0;MQRankSum=-10.103;QD=30.07;ReadPosRankSum=1.401;VQSLOD=3.0838;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,6:11:18.05:221,18,0	0/0:10,0:10:27.07:0,27,290	0/0:14,0:14:27.30:0,27,233	0/0:11,0:11:1.04:0,1,227	0/0:33,0:32:78.19:0,78,836	1/1:3,20:23:63.16:808,63,0	0/0:12,0:12:27.06:0,27,290	0/0:37,0:37:90.21:0,90,960	0/0:17,0:17:51.11:0,51,539	0/0:19,0:19:48.09:0,48,504	0/0:25,0:25:69.14:0,69,725	0/0:17,0:17:45.11:0,45,483	1/1:0,14:14:42.14:552,42,0	1/1:3,10:13:33.06:412,33,0	0/0:26,0:26:75.09:0,75,766	0/0:14,0:14:42.11:0,42,451	0/0:21,0:21:51.12:0,51,548	0/0:9,0:9:18.01:0,18,181	0/0:22,0:22:60.15:0,60,645	0/0:19,0:19:51.13:0,51,547	0/0:10,0:10:30.08:0,30,322	0/0:14,0:14:36.07:0,36,379	0/0:32,0:32:87.19:0,87,919	0/0:9,0:9:21.05:0,21,226	0/0:25,0:25:69.17:0,69,740	0/0:23,0:23:66.10:0,66,694	0/0:27,0:27:66.05:0,66,709	0/0:13,0:13:30.07:0,30,322
chr10	80243794	.	T	TG	14481.51	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=13.367;DP=500;FS=5.523;HRun=0;HaplotypeScore=80.9995;InbreedingCoeff=0.9842;MQ=78.02;MQ0=0;MQRankSum=-3.502;QD=42.47;ReadPosRankSum=-0.133;VQSLOD=5.1918;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:15.05:239,15,0	1/1:0,11:11:24.08:383,24,0	0/0:14,0:14:39.06:0,39,483	0/0:11,0:11:33.10:0,33,445	1/1:0,29:28:78.09:1156,78,0	1/1:1,23:24:72.24:1119,72,0	0/0:10,0:10:30.10:0,30,418	1/1:0,26:26:78.25:1220,78,0	0/0:15,0:15:45.15:0,45,629	1/1:1,25:26:72.25:1143,72,0	1/1:0,27:27:75.25:1162,75,0	0/0:14,0:14:42.14:0,42,587	1/1:0,21:21:57.19:845,57,0	1/1:0,11:11:33.11:520,33,0	1/1:1,25:26:28.74:1012,29,0	0/0:16,0:16:48.16:0,48,671	1/1:0,21:21:51.17:801,51,0	1/1:0,9:9:15.05:237,15,0	1/1:2,20:22:63.20:967,63,0	1/1:1,23:24:63.21:1005,63,0	1/1:0,10:10:30.10:479,30,0	0/0:16,0:16:48.16:0,48,671	0/0:30,0:30:90.28:0,90,1240	0/0:8,0:8:18.06:0,18,252	1/1:0,24:24:72.24:1139,72,0	0/0:21,1:22:18.24:0,18,833	1/1:1,24:25:66.23:1055,66,0	0/0:3,0:3:9.03:0,9,126
chr10	80243972	.	T	TTTTC	868.70	PASS	AB=0.818;AC=4;AF=0.071;AN=56;BaseQRankSum=8.136;DP=475;FS=8.761;HRun=0;HaplotypeScore=101.8437;InbreedingCoeff=-0.0792;MQ=59.57;MQ0=2;MQRankSum=-7.155;QD=17.37;ReadPosRankSum=-1.254;VQSLOD=2.3097;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:8,2:12:32.61:258,0,33	0/0:3,0:3:9.03:0,9,185	0/0:29,0:14:33.53:0,34,578	0/0:32,0:20:47.14:0,47,778	0/0:11,0:11:33.11:0,33,645	0/1:11,1:12:99:159,0,125	0/0:21,0:21:63.20:0,63,1249	0/0:26,0:26:75.26:0,75,1469	0/0:19,0:19:57.17:0,57,1103	0/0:14,0:14:42.14:0,42,866	0/0:23,0:23:69.15:0,69,1302	0/0:14,0:14:42.12:0,42,769	0/1:15,5:20:99:438,0,287	0/1:4,2:6:99:123,0,125	0/0:15,0:15:39.13:0,39,762	0/0:21,0:21:63.20:0,63,1263	0/0:7,0:8:20.90:0,21,343	0/0:24,0:24:69.24:0,69,1393	0/0:8,0:8:24.07:0,24,460	0/0:24,0:24:72.24:0,72,1386	0/0:19,0:19:56.66:0,57,904	0/0:11,0:11:33.11:0,33,669	0/0:12,0:12:36.10:0,36,671	0/0:14,0:14:39.13:0,39,752	0/0:23,0:23:69.24:0,69,1412	0/0:21,0:21:63.17:0,63,1256	0/0:16,0:16:48.15:0,48,938	0/0:15,0:15:45.14:0,45,889
chr10	80243974	.	TTTC	T	917.68	PASS	AB=0.806;AC=6;AF=0.107;AN=56;BaseQRankSum=9.770;DP=474;FS=6.553;HRun=0;HaplotypeScore=90.8842;InbreedingCoeff=0.4206;MQ=58.32;MQ0=2;MQRankSum=-8.624;QD=11.47;ReadPosRankSum=-0.474;VQSLOD=2.1018;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:9,1:12:39.09:79,0,39	0/0:3,0:3:9.03:0,9,204	0/1:29,0:14:9.28:9,0,551	0/0:33,0:19:47.62:0,48,844	0/0:11,0:11:27.09:0,27,596	0/1:3,7:11:3.09:311,0,3	0/0:22,0:22:63.22:0,63,1379	0/0:27,0:27:66.23:0,66,1455	0/0:18,0:18:54.19:0,54,1216	0/0:14,0:14:42.14:0,42,942	0/0:23,0:23:65.78:0,66,1293	0/0:13,0:13:33.11:0,33,742	0/1:6,9:20:3.04:451,0,3	1/1:0,4:6:15.10:193,15,0	0/0:15,0:15:36.12:0,36,790	0/0:20,0:20:60.20:0,60,1318	0/0:8,0:8:18.04:0,18,324	0/0:24,0:24:69.22:0,69,1496	0/0:8,0:8:21.07:0,21,476	0/0:24,0:24:66.20:0,66,1389	0/0:18,0:18:47.82:0,48,947	0/0:11,0:11:33.11:0,33,708	0/0:12,0:12:33.10:0,33,688	0/0:14,0:14:36.08:0,36,731	0/0:23,0:23:69.22:0,69,1518	0/0:21,0:21:60.21:0,60,1341	0/0:18,0:18:54.18:0,54,1157	0/0:14,0:14:42.11:0,42,863
chr10	80244035	.	T	TTCTG	3071.26	PASS	AB=0.958;AC=8;AF=0.143;AN=56;BaseQRankSum=12.426;DP=468;FS=22.724;HRun=0;HaplotypeScore=139.8470;InbreedingCoeff=0.6635;MQ=55.24;MQ0=5;MQRankSum=-11.556;QD=34.90;ReadPosRankSum=0.686;VQSLOD=1.8165;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:9:21.07:192,0,21	0/0:3,0:3:9.03:0,9,171	0/0:15,0:9:18.11:0,18,243	0/0:23,0:11:11.22:0,11,224	0/0:19,0:19:57.05:0,57,969	1/1:20,2:22:50.15:1039,50,0	0/0:13,0:14:36.51:0,37,525	0/0:32,0:29:78.19:0,78,1235	0/0:21,0:21:60.17:0,60,1009	0/0:18,0:18:48.13:0,48,817	0/0:14,0:14:42.09:0,42,731	0/0:8,0:8:24.08:0,24,454	1/1:25,2:27:72.83:1270,73,0	1/1:17,2:19:23.64:681,24,0	0/0:15,0:15:45.08:0,45,781	0/0:16,0:16:48.15:0,48,839	0/0:7,0:7:9.83:0,10,311	0/0:18,0:18:33.27:0,33,608	0/0:16,0:16:45.13:0,45,728	0/0:14,0:14:36.07:0,36,609	0/0:30,0:30:84.29:0,84,1584	0/0:9,0:9:27.09:0,27,511	0/1:10,0:11:43.28:43,0,463	0/0:16,0:17:45.13:0,45,804	0/0:23,0:23:66.08:0,66,1089	0/0:21,0:21:60.18:0,60,1016	0/0:22,0:22:66.10:0,66,1088	0/0:3,0:3:9.03:0,9,170
chr10	80244041	.	C	CT	2260.93	PASS	AB=0.850;AC=9;AF=0.161;AN=56;BaseQRankSum=12.906;DP=483;FS=29.848;HRun=3;HaplotypeScore=122.1133;InbreedingCoeff=0.7826;MQ=53.30;MQ0=5;MQRankSum=-12.225;QD=22.84;ReadPosRankSum=0.895;VQSLOD=1.7416;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,4:9:3.40:144,3,0	0/0:3,0:3:9.03:0,9,112	0/0:18,0:9:22.30:0,22,248	0/0:21,0:10:16.17:0,16,150	0/0:22,0:22:60.19:0,60,740	1/1:11,14:24:64.46:707,64,0	0/0:17,0:17:45.57:0,46,514	0/0:31,0:29:68.19:0,68,794	0/0:20,0:20:57.18:0,57,706	0/0:21,0:21:54.17:0,54,667	0/0:14,0:14:42.13:0,42,520	0/0:10,0:10:27.08:0,27,335	1/1:11,19:30:68.95:907,69,0	1/1:6,12:18:51.12:638,51,0	0/0:16,0:16:48.14:0,48,581	0/0:16,0:16:45.14:0,45,556	0/0:7,0:6:11.25:0,11,214	0/1:14,2:17:21.41:21,0,334	0/0:14,0:14:39.12:0,39,483	0/0:12,0:12:36.11:0,36,446	0/0:31,0:31:90.28:0,90,1114	0/0:10,0:10:27.08:0,27,334	0/0:12,0:12:19.29:0,19,358	0/0:20,0:20:53.16:0,53,624	0/0:23,0:23:63.20:0,63,780	0/0:21,0:21:60.19:0,60,743	0/0:21,0:21:60.19:0,60,743	0/0:3,0:3:9.03:0,9,112
chr10	80244044	.	C	CA	356.29	PASS	AB=0.944;AC=6;AF=0.107;AN=56;BaseQRankSum=11.054;DP=480;FS=12.472;HRun=0;HaplotypeScore=130.3354;InbreedingCoeff=0.5658;MQ=52.80;MQ0=5;MQRankSum=-10.450;QD=4.51;ReadPosRankSum=1.473;VQSLOD=3.0180;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:9:3.11:3,0,45	0/0:4,0:4:4.91:0,5,120	0/0:17,0:8:23.11:0,23,294	0/0:21,0:9:2.55:0,3,138	0/0:24,0:24:66.22:0,66,906	0/1:21,3:23:63.58:150,0,64	0/0:16,0:16:45.14:0,45,571	0/0:31,0:29:78.21:0,78,1005	0/0:19,0:19:57.19:0,57,796	0/0:21,0:21:57.19:0,57,776	0/0:15,0:14:42.14:0,42,586	0/0:10,0:10:30.10:0,30,418	1/1:26,2:28:16.94:171,17,0	1/1:15,3:18:16.36:160,16,0	0/0:16,0:16:48.16:0,48,668	0/0:16,0:16:48.16:0,48,668	0/0:8,0:7:21.03:0,21,271	0/0:14,0:14:21.34:0,21,381	0/0:14,0:14:42.14:0,42,585	0/0:12,0:12:36.12:0,36,503	0/0:32,0:32:90.29:0,90,1240	0/0:10,0:10:30.09:0,30,402	0/0:12,0:12:33.09:0,33,442	0/0:21,0:21:48.48:0,48,746	0/0:23,0:23:69.21:0,69,931	0/0:22,0:22:57.27:0,57,809	0/0:20,0:20:60.20:0,60,836	0/0:3,0:3:9.03:0,9,125
chr10	80244052	.	C	CT	1002.18	PASS	AB=0.905;AC=8;AF=0.143;AN=56;BaseQRankSum=12.819;DP=456;FS=8.694;HRun=1;HaplotypeScore=129.1296;InbreedingCoeff=0.6482;MQ=49.80;MQ0=9;MQRankSum=-12.111;QD=12.07;ReadPosRankSum=-0.879;VQSLOD=1.3609;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,1:8:8.01:119,0,8	0/0:4,0:4:2.09:0,2,107	0/0:13,0:6:15.03:0,15,174	0/0:19,0:7:3.46:0,3,24	0/0:32,0:30:61.47:0,61,878	1/1:21,3:22:22.68:419,23,0	0/0:18,0:17:51.13:0,51,623	0/0:26,0:25:60.33:0,60,737	0/0:19,0:19:54.16:0,54,684	0/0:23,0:22:57.15:0,57,701	0/0:17,0:15:29.20:0,29,407	0/0:8,0:8:24.08:0,24,311	1/1:22,1:23:47.53:356,48,0	1/1:17,0:17:34.85:253,35,0	0/0:18,0:18:50.98:0,51,600	0/0:13,0:13:38.90:0,39,465	0/0:8,0:7:19.60:0,20,253	0/1:9,1:10:3.30:3,0,209	0/0:11,0:10:30.10:0,30,389	0/0:10,0:10:30.08:0,30,374	0/0:28,0:28:76.88:0,77,1010	0/0:8,0:8:24.07:0,24,299	0/0:12,0:12:36.12:0,36,467	0/0:18,0:18:23.20:0,23,614	0/0:24,0:24:56.04:0,56,706	0/0:22,0:22:36.40:0,36,693	0/0:19,0:19:57.19:0,57,738	0/0:2,0:1:3.01:0,3,39
chr10	80244053	.	TCCC	T	1501.46	PASS	AB=0.884;AC=8;AF=0.143;AN=56;BaseQRankSum=12.458;DP=456;FS=17.153;HRun=3;HaplotypeScore=134.0864;InbreedingCoeff=0.5855;MQ=49.74;MQ0=11;MQRankSum=-10.734;QD=16.32;ReadPosRankSum=1.339;VQSLOD=-0.4078;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,2:7:1.95:212,2,0	0/0:4,0:4:12.04:0,12,205	0/0:13,0:6:15.03:0,15,270	0/0:19,0:7:6.41:0,6,42	0/0:34,0:31:71.62:0,72,1624	0/1:19,4:21:27.53:517,0,28	0/0:19,0:18:54.17:0,54,1142	0/0:26,0:23:63.82:0,64,1056	0/0:19,0:19:53.88:0,54,1234	0/0:24,0:23:63.11:0,63,1112	0/0:17,0:15:36.04:0,36,736	0/0:8,0:8:24.08:0,24,556	1/1:17,6:23:60.56:513,61,0	1/1:12,4:16:43.04:392,43,0	0/0:18,0:18:54.08:0,54,1017	0/0:13,0:13:27.18:0,27,778	0/0:8,0:7:24.05:0,24,459	0/0:10,0:10:18.01:0,18,389	0/0:12,0:10:30.10:0,30,633	0/0:11,0:11:30.09:0,30,643	0/0:28,0:28:76.64:0,77,1761	0/0:8,0:8:24.07:0,24,543	0/0:12,0:12:36.12:0,36,773	0/0:17,0:17:51.10:0,51,1062	0/0:23,0:23:60.07:0,60,1287	0/1:20,2:22:7.27:7,0,1184	0/0:19,0:19:57.20:0,57,1341	0/0:2,0:1:3.01:0,3,74
chr10	80244069	.	TC	T	820.04	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=11.842;DP=439;FS=5.952;HRun=3;HaplotypeScore=117.3189;InbreedingCoeff=0.6126;MQ=47.31;MQ0=16;MQRankSum=-8.452;QD=9.21;ReadPosRankSum=0.889;VQSLOD=1.0473;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:11.81:78,12,0	0/0:3,0:4:0.79:0,1,64	0/0:9,0:3:9.03:0,9,134	0/0:10,0:2:3.01:0,3,48	0/0:34,0:31:70.91:0,71,1021	0/1:21,0:19:22.80:195,0,23	0/0:21,0:20:56.98:0,57,848	0/0:19,0:15:36.06:0,36,523	0/0:21,0:21:57.13:0,57,888	0/0:21,0:20:31.54:0,32,585	0/0:16,0:12:28.50:0,28,396	0/0:9,0:9:27.09:0,27,429	1/1:20,0:20:58.62:401,59,0	1/1:17,0:17:38.44:288,38,0	0/0:17,0:17:17.92:0,18,499	0/0:15,0:15:43.96:0,44,671	0/0:9,0:8:21.34:0,21,277	0/0:9,0:9:14.21:0,14,238	0/0:14,0:11:33.08:0,33,471	0/0:7,1:8:21.07:0,21,336	0/0:23,3:26:70.45:0,70,1031	0/0:10,0:9:27.09:0,27,429	0/0:15,0:15:45.09:0,45,681	0/0:20,0:20:57.19:0,57,881	0/0:23,0:23:53.46:0,53,794	0/1:23,0:23:2.27:2,0,742	0/0:17,0:17:48.16:0,48,757	0/0:3,0:2:6.02:0,6,90
chr10	80244070	.	CT	C	1807.96	PASS	AB=0.893;AC=11;AF=0.196;AN=56;BaseQRankSum=12.222;DP=435;FS=3.648;HRun=1;HaplotypeScore=107.8850;InbreedingCoeff=0.4185;MQ=47.37;MQ0=16;MQRankSum=-9.517;QD=16.00;ReadPosRankSum=-0.018;VQSLOD=3.7221;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,4:5:14.93:160,15,0	0/1:4,0:4:4.10:4,0,41	0/0:9,0:4:9.03:0,9,134	0/0:9,0:1:3.01:0,3,48	0/0:33,1:31:22.95:0,23,968	0/1:7,13:18:7:459,0,7	0/0:21,0:20:56.98:0,57,853	0/0:19,0:14:32.41:0,32,514	0/0:21,0:21:57.11:0,57,884	0/0:21,0:20:5.98:0,6,564	0/0:16,0:12:14.22:0,14,374	0/0:9,0:9:27.09:0,27,429	1/1:2,19:21:60.18:769,60,0	1/1:1,14:15:39.13:511,39,0	0/1:15,1:16:15.41:15,0,464	0/0:15,0:15:45.13:0,45,679	0/0:9,0:8:7.67:0,8,263	0/1:9,0:9:4.84:5,0,222	0/0:15,0:12:33.06:0,33,463	0/0:8,0:8:21.07:0,21,333	0/0:26,0:26:72.14:0,72,1065	0/0:10,0:9:27.09:0,27,432	0/0:15,0:15:45.15:0,45,704	0/0:21,0:21:60.16:0,60,928	0/0:23,0:23:52.56:0,53,761	0/1:20,2:22:41.96:42,0,742	0/0:18,0:18:27.31:0,27,716	0/0:3,0:2:6.02:0,6,77
chr10	80244118	.	TCTC	T	185.29	PASS	AB=0.857;AC=6;AF=0.107;AN=56;BaseQRankSum=6.548;DP=503;FS=3.246;HRun=0;HaplotypeScore=138.7490;InbreedingCoeff=-0.1389;MQ=62.56;MQ0=11;MQRankSum=-2.077;QD=2.57;ReadPosRankSum=-4.163;VQSLOD=1.3440;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:51.67:0,52,1325	0/0:6,0:6:18.06:0,18,387	0/0:51,0:23:50.66:0,51,1129	0/0:63,0:26:21.51:0,22,772	0/1:15,8:21:99:116,0,973	0/0:14,0:14:35.11:0,35,817	0/0:24,0:24:72.25:0,72,1724	0/0:17,0:16:42.06:0,42,904	0/0:14,0:15:44.18:0,44,1005	0/1:12,3:15:82.06:82,0,767	0/0:10,1:11:30.10:0,30,723	0/0:12,0:12:36.12:0,36,860	0/0:26,0:26:36.76:0,37,1459	0/0:19,0:19:44.59:0,45,1168	0/0:15,0:15:42.14:0,42,976	0/0:16,0:16:48.16:0,48,1150	0/0:10,0:10:7.60:0,8,447	0/1:11,0:11:33.16:33,0,387	0/0:12,0:12:33.11:0,33,731	0/0:11,0:11:4.80:0,5,501	0/0:21,0:21:2.95:0,3,1045	0/0:9,0:9:27.09:0,27,657	0/0:15,0:15:45.14:0,45,1023	0/0:25,0:25:75.26:0,75,1838	0/1:7,2:9:10.79:11,0,384	0/0:14,1:14:0.22:0,0,635	0/1:7,1:8:2.89:3,0,419	0/1:5,1:6:55.71:56,0,132
chr10	80244157	.	TC	T	3127.81	PASS	AB=0.969;AC=9;AF=0.161;AN=56;BaseQRankSum=10.170;DP=526;FS=14.539;HRun=2;HaplotypeScore=86.2929;InbreedingCoeff=0.8821;MQ=71.71;MQ0=0;MQRankSum=-9.012;QD=25.22;ReadPosRankSum=4.421;VQSLOD=2.2800;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:72.15:913,72,0	0/0:9,0:9:27.09:0,27,405	0/1:30,1:20:6.79:7,0,473	0/0:40,0:30:24.36:0,24,724	0/0:22,0:22:63.21:0,63,944	1/1:0,21:21:54.18:700,54,0	0/0:28,0:28:81.27:0,81,1212	0/0:20,0:20:57.13:0,57,791	0/0:16,0:16:48.15:0,48,700	0/0:14,0:14:42.14:0,42,629	0/0:17,0:17:45.15:0,45,673	0/0:13,0:13:39.13:0,39,584	1/1:1,24:25:72.23:933,72,0	1/1:0,21:21:57.19:739,57,0	0/0:20,0:20:60.16:0,60,874	0/0:15,0:15:45.14:0,45,655	0/0:15,0:15:37.01:0,37,541	0/0:11,0:11:27.06:0,27,379	0/0:22,0:22:66.20:0,66,945	0/0:16,0:16:48.16:0,48,719	0/0:17,0:17:48.16:0,48,718	0/0:11,0:11:33.11:0,33,495	0/0:13,0:13:39.13:0,39,581	0/0:26,0:26:75.25:0,75,1121	0/0:16,0:16:48.16:0,48,719	0/0:21,0:21:63.21:0,63,944	0/0:12,0:12:36.12:0,36,539	0/0:8,0:8:13.24:0,13,262
chr10	80244347	.	AG	A	269.87	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.015;DP=393;FS=21.926;HRun=2;HaplotypeScore=53.7614;InbreedingCoeff=0.8682;MQ=74.44;MQ0=0;MQRankSum=-4.940;QD=11.73;ReadPosRankSum=-0.546;VQSLOD=0.4187;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,1:2:6:52,6,0	0/0:5,0:5:15.05:0,15,224	0/0:15,0:13:21.47:0,21,275	0/0:11,0:10:15.35:0,15,194	0/0:26,0:26:75.21:0,75,1056	1/1:2,6:8:20.93:171,21,0	0/0:18,0:18:54.17:0,54,784	0/0:23,0:23:66.21:0,66,946	0/0:13,0:13:36.10:0,36,497	0/0:18,0:18:54.17:0,54,762	0/0:20,0:20:60.19:0,60,876	0/0:7,0:7:21.07:0,21,311	1/1:4,6:10:20.68:165,21,0	1/1:2,1:3:3:26,3,0	0/0:17,0:17:50.49:0,50,664	0/0:13,0:13:39.13:0,39,582	0/0:27,0:27:81.24:0,81,1158	0/0:11,0:11:30.09:0,30,429	0/0:13,0:13:39.02:0,39,472	0/0:25,0:25:75.22:0,75,1061	0/0:5,0:5:15.05:0,15,223	0/0:10,0:10:30.10:0,30,447	0/0:14,0:14:42.12:0,42,588	0/0:6,0:6:18.06:0,18,269	0/0:22,0:22:60.20:0,60,895	0/0:18,0:18:53.94:0,54,474	0/0:31,0:31:93.31:0,93,1361	0/0:2,0:2:5.75:0,6,39
chr10	80244349	.	G	GT	537	PASS	AB=0.923;AC=7;AF=0.125;AN=56;BaseQRankSum=2.188;DP=398;FS=11.900;HRun=9;HaplotypeScore=52.8442;InbreedingCoeff=0.4765;MQ=73.24;MQ0=0;MQRankSum=0.873;QD=10.13;ReadPosRankSum=-1.680;VQSLOD=0.6200;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:2.04:0,2,6	0/0:5,0:5:15:0,15,130	0/0:17,0:14:23.76:0,24,147	0/0:10,0:9:11.32:0,11,92	0/0:26,0:26:68.96:0,69,594	0/0:8,0:8:9.08:0,9,26	0/0:18,0:18:50.97:0,51,439	0/0:23,0:23:59.87:0,60,510	0/0:12,0:12:26.98:0,27,234	0/0:17,1:18:14.79:0,15,357	0/0:20,0:20:59.98:0,60,518	0/0:8,0:8:20.99:0,21,182	0/0:10,0:10:10.77:0,11,29	0/0:3,0:3:1.75:0,2,5	0/0:17,0:17:37.43:0,37,336	0/0:13,0:13:35.98:0,36,313	0/0:27,0:27:56.07:0,56,606	0/1:9,2:11:3.18:3,0,204	0/1:11,1:12:6.15:6,0,181	0/0:25,0:25:65.98:0,66,573	0/1:6,0:6:5.51:6,0,112	0/0:10,0:10:29.99:0,30,260	0/0:14,0:14:35.99:0,36,312	0/0:6,0:6:18:0,18,156	0/0:22,0:22:59.96:0,60,516	1/1:0,18:18:53.98:578,54,0	0/0:31,0:31:65.09:0,65,747	1/1:0,5:6:6.02:65,6,0
chr10	80244355	.	TTTTGTTTGTTTG	T	1174.34	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.542;DP=401;FS=39.570;HRun=0;HaplotypeScore=139.0346;InbreedingCoeff=0.8458;MQ=71.24;MQ0=0;MQRankSum=-4.491;QD=61.81;ReadPosRankSum=0.625;VQSLOD=1.7444;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:1:3.01:93,3,0	0/0:5,0:5:15.05:0,15,894	0/0:16,0:13:35.98:0,36,963	0/0:10,0:9:14.15:0,14,654	0/0:26,0:26:69.23:0,69,3969	1/1:0,6:6:15.05:480,15,0	0/0:20,0:20:60.19:0,60,3212	0/0:22,0:22:63.10:0,63,3173	0/0:11,0:11:27.08:0,27,1609	0/0:18,0:18:51.16:0,51,2981	0/0:21,0:21:63.22:0,63,3249	0/0:8,0:8:24.08:0,24,1429	1/1:8,1:9:18.06:632,18,0	1/1:3,0:3:3.01:108,3,0	0/0:16,0:16:45.15:0,45,2532	0/0:16,0:16:45.14:0,45,2538	0/0:26,0:26:78.27:0,78,4494	0/0:11,0:11:30.10:0,30,1604	0/0:12,0:12:33.11:0,33,1633	0/0:26,0:26:75.20:0,75,4171	0/0:6,0:6:18.06:0,18,1056	0/0:10,0:10:30.10:0,30,1542	0/0:13,0:13:39.13:0,39,2164	0/0:7,0:7:21.07:0,21,1214	0/0:22,0:22:60.18:0,60,3296	0/0:19,0:19:47.73:0,48,2712	0/0:35,0:35:94.04:0,94,5309	0/0:6,0:6:6.02:0,6,315
chr10	80244356	.	TTTGTTTGTTTG	T	1006.98	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.234;DP=400;FS=43.120;HRun=0;HaplotypeScore=130.8104;InbreedingCoeff=0.8458;MQ=70.19;MQ0=0;MQRankSum=-5.099;QD=53.00;ReadPosRankSum=1.440;VQSLOD=1.1925;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:1:3.01:86,3,0	0/0:5,0:5:15.05:0,15,830	0/0:16,0:13:36.08:0,36,924	0/0:9,0:8:14.15:0,14,622	0/0:25,0:25:69.22:0,69,3670	1/1:6,0:6:15.05:435,15,0	0/0:20,0:20:60.19:0,60,2989	0/0:22,0:22:63.06:0,63,2927	0/0:10,0:10:27.08:0,27,1493	0/0:18,0:18:51.16:0,51,2764	0/0:21,0:21:63.22:0,63,2985	0/0:8,0:8:24.08:0,24,1326	1/1:4,5:9:18.06:534,18,0	1/1:2,1:3:3.01:90,3,0	0/0:16,0:16:45.15:0,45,2349	0/0:16,0:16:45.14:0,45,2358	0/0:26,0:26:78.27:0,78,4166	0/0:11,0:11:30.10:0,30,1475	0/0:12,0:12:33.11:0,33,1517	0/0:26,0:26:75.21:0,75,3870	0/0:6,0:6:18.06:0,18,979	0/0:11,0:11:33.10:0,33,1516	0/0:13,0:13:39.13:0,39,2006	0/0:7,0:7:21.07:0,21,1127	0/0:23,0:23:63.19:0,63,3162	0/0:19,0:19:56.41:0,56,2525	0/0:35,0:35:99:0,105,4928	0/0:6,0:6:6.02:0,6,289
chr10	80244516	.	T	TGTAGA	19085.73	PASS	AB=0.944;AC=35;AF=0.625;AN=56;BaseQRankSum=-10.574;DP=443;FS=2.255;HRun=0;HaplotypeScore=71.8707;InbreedingCoeff=0.8542;MQ=84.60;MQ0=0;MQRankSum=-9.211;QD=64.70;ReadPosRankSum=-0.128;VQSLOD=5.6149;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,1:2:3.01:80,3,0	1/1:0,12:12:33.11:1006,33,0	0/0:15,0:15:32.11:0,32,553	0/0:21,0:21:51.10:0,51,1042	1/1:3,17:21:48.16:1468,48,0	1/1:1,5:6:18.06:549,18,0	0/0:18,0:18:51.16:0,51,1024	1/1:3,22:25:69.21:1944,69,0	0/0:17,0:17:51.18:0,51,1079	1/1:2,17:19:51.12:1519,51,0	1/1:2,17:21:45.15:1375,45,0	0/0:12,0:12:36.12:0,36,746	1/1:0,4:4:3.01:94,3,0	1/1:2,3:5:6.02:149,6,0	1/1:1,17:19:38.75:1207,39,0	0/0:16,0:16:45.15:0,45,946	1/1:1,20:23:54.19:1686,54,0	1/1:0,7:7:12.04:375,12,0	1/1:6,14:23:60.21:1649,60,0	1/1:4,15:19:45.15:1375,45,0	1/1:3,11:16:27.09:810,27,0	0/0:12,0:12:36.12:0,36,754	0/0:12,0:12:36.12:0,36,767	0/0:13,0:13:36.12:0,36,757	1/1:1,14:17:33.11:1019,33,0	0/1:16,1:17:45.62:46,0,875	1/1:4,31:39:90.78:2734,91,0	0/0:12,0:12:33.11:0,33,682
chr10	80244701	.	A	AT	3615.49	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.198;DP=620;FS=0.000;HRun=5;HaplotypeScore=95.2795;InbreedingCoeff=0.9954;MQ=68.36;MQ0=0;MQRankSum=-7.045;QD=34.11;ReadPosRankSum=0.008;VQSLOD=3.0774;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:72.19:926,72,0	0/0:5,0:5:15.04:0,15,161	0/0:20,0:20:52.36:0,52,540	0/0:21,0:21:54.06:0,54,560	0/0:25,0:25:72.18:0,72,774	1/1:2,22:24:63.20:828,63,0	0/0:17,0:17:48.12:0,48,516	0/0:26,0:26:72.16:0,72,774	0/0:23,0:23:60.15:0,60,645	0/0:26,0:26:72.13:0,72,755	0/0:23,0:23:66.16:0,66,709	0/0:17,0:17:51.13:0,51,548	1/1:0,26:26:72.23:947,72,0	1/1:2,25:27:43.25:914,43,0	0/0:20,0:20:51.12:0,51,547	0/0:20,0:20:54.13:0,54,580	0/0:16,0:15:45.11:0,45,483	0/0:14,0:14:36.09:0,36,387	0/0:17,0:17:48.12:0,48,516	0/0:37,0:37:99:0,105,1119	0/0:16,0:16:39.09:0,39,419	0/0:17,0:17:45.11:0,45,484	0/0:25,0:25:63.14:0,63,669	0/0:31,0:31:81.20:0,81,871	0/0:31,0:31:81.20:0,81,870	0/0:20,0:20:51.12:0,51,542	0/0:35,0:35:99:0,102,1086	0/0:12,0:12:33.08:0,33,355
chr10	80245109	.	CAATT	C	1582.21	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.662;DP=646;FS=8.122;HRun=0;HaplotypeScore=161.5889;InbreedingCoeff=0.9996;MQ=76.35;MQ0=1;MQRankSum=-3.180;QD=43.95;ReadPosRankSum=0.846;VQSLOD=3.5726;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.16:0,57,1258	0/0:12,0:12:36.12:0,36,691	0/0:14,0:14:42.01:0,42,1014	0/0:14,0:14:39.09:0,39,822	0/0:27,0:27:81.17:0,81,1489	0/0:26,0:26:63.21:0,63,1586	0/0:23,0:23:60.21:0,60,1449	0/0:39,0:39:99:0,102,1822	0/0:21,0:21:60.21:0,60,1522	0/0:32,0:32:90.29:0,90,1622	0/0:23,0:23:60.21:0,60,1150	0/0:21,0:21:57.19:0,57,1394	0/0:36,0:36:96.33:0,96,2432	0/0:29,0:29:81.26:0,81,2014	0/0:30,0:30:81.28:0,81,1500	0/0:22,0:22:63.21:0,63,1549	0/0:25,0:25:66.23:0,66,1262	0/0:14,0:14:39.13:0,39,795	0/0:29,0:29:75.21:0,75,1337	0/0:28,0:28:75.20:0,75,1343	0/0:14,0:14:42.12:0,42,736	0/0:20,0:20:54.18:0,54,1279	0/0:26,0:26:75.26:0,75,1930	0/0:11,0:11:33.11:0,33,831	0/0:26,0:26:78.27:0,78,1473	1/1:1,23:24:69.16:1111,69,0	0/0:29,0:29:87.27:0,87,1594	1/1:1,11:11:33.11:593,33,0
chr10	80246185	.	G	GA	2060.28	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=1.029;DP=441;FS=1.103;HRun=5;HaplotypeScore=46.9986;InbreedingCoeff=0.9241;MQ=69.39;MQ0=0;MQRankSum=-4.304;QD=34.92;ReadPosRankSum=1.621;VQSLOD=3.7765;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:21.07:276,21,0	0/0:6,0:6:18.05:0,18,193	0/0:3,0:3:6.01:0,6,64	0/0:9,0:9:22.02:0,22,200	0/0:33,0:33:87.19:0,87,924	1/1:1,18:19:57.17:734,57,0	0/0:5,0:5:12.03:0,12,129	0/0:33,0:33:84.16:0,84,884	0/0:18,0:18:48.12:0,48,516	0/0:34,0:34:90.22:0,90,968	0/0:27,0:27:75.16:0,75,795	0/0:9,0:9:24.06:0,24,258	1/1:3,14:17:48.15:618,48,0	1/1:2,14:16:45.15:591,45,0	0/0:17,0:17:48.08:0,48,497	0/0:14,0:14:39.10:0,39,419	0/0:11,0:11:33.08:0,33,354	0/0:5,0:5:15.04:0,15,161	0/0:18,0:18:48.12:0,48,516	0/0:28,0:28:75.18:0,75,806	0/0:3,0:3:9:0,9,87	0/0:13,0:13:36.09:0,36,387	0/0:23,0:23:60.15:0,60,644	0/0:9,0:9:27.07:0,27,290	0/0:18,0:18:51.10:0,51,538	0/0:15,0:15:45.11:0,45,484	0/0:27,0:26:72.16:0,72,765	0/0:4,0:4:9.02:0,9,97
chr10	80246232	.	TCC	T	2368.04	PASS	AB=0.533;AC=7;AF=0.125;AN=56;BaseQRankSum=9.306;DP=461;FS=2.541;HRun=2;HaplotypeScore=63.5330;InbreedingCoeff=0.8180;MQ=83.91;MQ0=1;MQRankSum=-5.061;QD=41.54;ReadPosRankSum=0.798;VQSLOD=3.7143;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:1,7:8:21.29:272,0,21	0/0:6,0:6:18.06:0,18,366	0/0:19,0:19:51.65:0,52,1006	0/0:18,0:17:46.79:0,47,726	0/0:26,0:26:78.25:0,78,1522	1/1:2,18:20:60.20:974,60,0	0/0:9,0:9:27.09:0,27,537	0/0:28,0:28:84.27:0,84,1638	0/0:17,0:17:50.20:0,50,969	0/0:31,0:31:93.31:0,93,1824	0/0:27,0:27:78.25:0,78,1520	0/0:14,0:14:42.14:0,42,849	1/1:1,11:12:33.11:538,33,0	1/1:0,17:17:45.15:733,45,0	0/0:21,0:21:63.22:0,63,1270	0/0:12,0:12:33.11:0,33,661	0/0:15,0:15:45.15:0,45,881	0/0:5,0:5:15.05:0,15,303	0/0:23,0:23:69.24:0,69,1374	0/0:20,0:20:60.21:0,60,1205	0/0:5,0:5:15.05:0,15,305	0/0:12,0:12:36.12:0,36,710	0/0:24,0:24:69.23:0,69,1341	0/0:8,0:8:24.08:0,24,487	0/0:21,0:21:63.20:0,63,1195	0/0:12,0:12:36.12:0,36,732	0/0:27,0:27:81.28:0,81,1634	0/0:4,0:4:12.04:0,12,244
chr10	80246428	.	CA	C	1956.85	PASS	AB=0.909;AC=9;AF=0.161;AN=56;BaseQRankSum=10.938;DP=477;FS=2.287;HRun=5;HaplotypeScore=48.8941;InbreedingCoeff=0.8857;MQ=78.39;MQ0=0;MQRankSum=-3.284;QD=24.46;ReadPosRankSum=3.221;VQSLOD=2.5274;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:30:312,30,0	0/0:6,0:6:18.06:0,18,246	0/0:10,0:10:15.13:0,15,229	0/0:12,0:12:28.64:0,29,351	0/0:39,0:39:99:0,117,1568	1/1:3,16:19:45.13:510,45,0	0/0:15,0:15:42.14:0,42,574	0/0:24,0:24:69.23:0,69,944	0/0:15,0:15:45.12:0,45,572	0/0:24,0:24:72.23:0,72,971	0/0:21,0:21:63.21:0,63,862	0/0:26,0:26:78.26:0,78,1067	1/1:0,24:24:66.19:748,66,0	1/1:0,17:17:48.14:544,48,0	0/0:14,0:14:42.12:0,42,557	0/0:11,0:11:27.08:0,27,352	0/0:7,0:7:18.06:0,18,246	0/0:6,0:6:12.01:0,12,144	0/0:16,0:16:48.15:0,48,640	0/0:29,0:29:84.28:0,84,1149	0/0:16,0:16:45.14:0,45,600	0/0:12,0:12:36.10:0,36,461	0/0:18,0:18:54.15:0,54,719	0/1:9,1:10:3.93:4,0,339	0/0:19,0:19:54.18:0,54,738	0/0:20,0:20:54.17:0,54,724	0/0:31,0:30:90.30:0,90,1230	0/0:6,0:6:18.06:0,18,246
chr10	80246753	.	G	GA	7671.83	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-14.428;DP=493;FS=6.024;HRun=7;HaplotypeScore=45.1721;InbreedingCoeff=0.9952;MQ=79.16;MQ0=0;MQRankSum=-0.751;QD=30.44;ReadPosRankSum=1.040;VQSLOD=5.1538;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:27.04:0,27,261	1/1:2,13:15:36.11:435,36,0	0/0:11,0:11:20.40:0,20,182	0/0:15,0:15:36.01:0,36,334	1/1:8,23:31:69.21:834,69,0	0/0:20,0:20:60.07:0,60,568	0/0:17,0:17:42.03:0,42,406	1/1:8,27:35:81.21:944,81,0	0/0:15,0:15:45.07:0,45,435	1/1:4,19:23:60.16:711,60,0	1/1:1,20:21:57.17:689,57,0	0/0:20,0:20:60.06:0,60,562	0/0:15,0:15:45.03:0,45,426	0/0:24,0:24:63.10:0,63,608	1/1:0,18:18:48.15:580,48,0	0/0:16,0:16:48.08:0,48,464	1/1:0,7:7:18.01:201,18,0	1/1:3,10:13:30.05:344,30,0	1/1:2,11:13:33.10:399,33,0	1/1:1,23:24:69.21:834,69,0	1/1:2,7:9:21.06:254,21,0	0/0:21,0:21:60.09:0,60,579	0/0:19,0:19:48.05:0,48,457	0/0:15,0:15:42.05:0,42,399	1/1:1,16:17:48.15:580,48,0	0/0:19,0:19:51.08:0,51,493	1/1:1,25:25:72.22:870,72,0	0/0:5,0:5:15.02:0,15,145
chr10	80246937	.	C	CA	11576.42	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-9.465;DP=497;FS=6.311;HRun=4;HaplotypeScore=53.1741;InbreedingCoeff=0.9882;MQ=78.98;MQ0=0;MQRankSum=-2.247;QD=35.95;ReadPosRankSum=0.593;VQSLOD=5.0992;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:15.05:205,15,0	1/1:0,4:4:12.04:164,12,0	0/0:13,0:13:22.25:0,22,220	0/0:11,0:11:24:0,24,236	1/1:1,29:30:87.18:1146,87,0	1/1:0,23:23:63.21:859,63,0	0/0:13,0:13:39.11:0,39,442	1/1:5,26:30:75.24:1010,75,0	0/0:16,0:16:45.13:0,45,510	1/1:2,24:26:72.21:953,72,0	1/1:0,18:18:51.17:698,51,0	0/0:22,0:22:60.15:0,60,662	1/1:1,14:15:42.14:575,42,0	1/1:1,14:15:36.12:490,36,0	1/1:2,15:17:42.14:575,42,0	0/0:20,0:20:54.12:0,54,593	1/1:1,12:13:35.91:461,36,0	1/1:6,15:22:50.68:667,51,0	1/1:1,14:15:42.14:565,42,0	1/1:0,24:24:72.20:964,72,0	1/1:1,6:7:15.05:205,15,0	0/0:15,0:15:42.10:0,42,465	0/0:24,0:24:72.21:0,72,817	0/0:13,0:13:39.11:0,39,442	1/1:0,22:22:60.20:821,60,0	0/0:19,1:20:16.10:0,16,558	1/1:3,32:35:90.19:1221,90,0	0/0:8,0:8:24.02:0,24,248
chr10	80248305	.	C	CTTCT	1195.60	PASS	AB=1.000;AC=13;AF=0.250;AN=52;BaseQRankSum=1.507;DP=603;FS=1.563;HRun=0;HaplotypeScore=135.6000;InbreedingCoeff=0.5220;MQ=58.63;MQ0=10;MQRankSum=-2.703;QD=6.53;ReadPosRankSum=-2.620;VQSLOD=2.3223;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,7:18:17.73:363,18,0	0/0:9,0:9:18.95:0,19,280	./.	./.	0/0:38,0:37:79.12:0,79,1134	1/1:18,0:18:1.41:3,1,0	0/0:12,0:12:12.01:0,12,141	1/1:27,0:26:0.47:1,0,0	0/0:19,0:20:30.10:0,30,452	0/0:16,0:16:27.08:0,27,380	0/0:23,0:23:42.13:0,42,623	0/0:20,0:20:36.09:0,36,516	0/0:26,0:25:42.07:0,42,575	0/0:18,0:17:25.72:0,26,396	0/0:17,0:19:30.09:0,30,464	0/0:22,0:22:39.12:0,39,577	0/1:27,0:27:48.10:48,0,250	0/1:17,0:16:31.61:32,0,124	0/0:15,0:12:15.05:0,15,230	0/0:34,0:34:41.13:0,41,743	0/0:12,0:13:15.05:0,15,231	1/1:13,12:26:17.43:773,17,0	0/0:34,0:34:69.22:0,69,1046	0/0:22,0:22:33.09:0,33,487	0/0:26,0:25:39.12:0,39,580	0/1:31,0:30:69.92:70,0,84	0/0:32,0:32:34.99:0,35,651	1/1:5,0:11:3.01:52,3,0
chr10	80248501	.	A	AT	12264	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-15.064;DP=575;FS=0.982;HRun=0;HaplotypeScore=68.1814;InbreedingCoeff=0.9890;MQ=68.30;MQ0=0;MQRankSum=0.901;QD=40.74;ReadPosRankSum=1.771;VQSLOD=5.5555;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:27.89:0,28,376	1/1:0,9:9:24.08:359,24,0	0/0:10,0:10:29.75:0,30,315	0/0:5,0:4:9.02:0,9,111	1/1:0,32:32:93.25:1364,93,0	0/0:24,0:24:72.15:0,72,936	0/0:11,0:11:33.11:0,33,461	1/1:0,34:34:99:1438,99,0	0/0:15,0:15:45.15:0,45,628	1/1:1,22:23:66.17:921,66,0	1/1:0,23:23:57.19:851,57,0	0/0:22,0:22:66.21:0,66,901	0/0:20,0:20:60.14:0,60,781	0/0:22,0:22:66.17:0,66,889	1/1:0,28:28:78.26:1168,78,0	0/0:30,0:30:90.30:0,90,1256	1/1:0,9:9:24.08:359,24,0	1/1:0,6:6:18.06:269,18,0	1/1:2,27:29:75.20:1044,75,0	1/1:1,37:38:99:1528,108,0	1/1:0,22:22:60.20:898,60,0	0/0:22,0:22:66.20:0,66,889	0/0:30,0:30:87.27:0,87,1180	0/0:16,0:16:48.16:0,48,668	1/1:0,21:21:63.21:943,63,0	0/0:30,0:29:60.31:0,60,1088	1/1:0,27:27:75.25:1122,75,0	0/0:6,0:6:18.06:0,18,251
chr10	80248679	.	C	CAT	4235.39	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.684;DP=644;FS=4.040;HRun=0;HaplotypeScore=128.7195;InbreedingCoeff=0.9994;MQ=71.18;MQ0=0;MQRankSum=-10.596;QD=46.04;ReadPosRankSum=0.054;VQSLOD=5.2426;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:18:36.12:673,36,0	0/0:13,0:13:39.13:0,39,574	0/0:10,0:10:27.09:0,27,398	0/0:15,0:15:42.12:0,42,580	0/0:25,0:25:75.25:0,75,1101	1/1:3,22:25:69.22:1257,69,0	0/0:10,0:10:30.09:0,30,423	0/0:33,0:33:93.30:0,93,1335	0/0:22,0:22:62.80:0,63,890	0/0:29,0:29:82.16:0,82,1195	0/0:28,0:28:81.26:0,81,1172	0/0:16,0:16:45.15:0,45,662	1/1:7,19:26:66.23:1226,66,0	1/1:6,17:23:60.19:1079,60,0	0/0:21,0:21:60.19:0,60,856	0/0:39,0:39:99:0,111,1635	0/0:20,0:20:57.19:0,57,836	0/0:13,0:13:33.11:0,33,485	0/0:26,0:26:72.23:0,72,1040	0/0:38,0:38:99:0,114,1678	0/0:21,0:21:63.21:0,63,927	0/0:25,0:25:75.25:0,75,1104	0/0:27,0:27:78.25:0,78,1128	0/0:22,0:22:66.22:0,66,972	0/0:30,0:30:90.30:0,90,1326	0/0:26,0:26:75.25:0,75,1105	0/0:29,0:29:87.28:0,87,1260	0/0:14,0:14:42.14:0,42,619
chr10	80248692	.	A	AT	2619.60	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=13.005;DP=647;FS=3.503;HRun=1;HaplotypeScore=124.4340;InbreedingCoeff=0.9997;MQ=74.83;MQ0=0;MQRankSum=-12.030;QD=36.90;ReadPosRankSum=0.423;VQSLOD=3.2734;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:49.96:0,50,324	0/0:15,0:15:45.15:0,45,584	0/0:19,0:19:51.15:0,51,643	0/0:17,0:17:51.16:0,51,655	0/0:27,0:27:78.25:0,78,1012	1/1:1,27:28:81.24:1078,81,0	0/0:11,0:11:33.11:0,33,428	0/0:26,0:26:75.24:0,75,961	0/0:23,0:23:66.21:0,66,857	0/0:26,0:26:78.25:0,78,1013	0/0:32,0:32:96.31:0,96,1246	0/0:16,0:16:48.16:0,48,623	1/1:0,23:24:72.24:974,72,0	1/1:1,18:19:54.11:711,54,0	0/0:20,0:20:60.20:0,60,779	0/0:34,0:34:99:0,102,1296	0/0:18,0:18:51.17:0,51,662	0/0:10,0:10:30.05:0,30,370	0/0:17,0:17:48.16:0,48,623	0/0:35,0:35:99:0,105,1347	0/0:22,0:22:63.19:0,63,803	0/0:29,0:29:87.26:0,87,1095	0/0:27,0:27:72.23:0,72,935	0/0:21,0:21:63.19:0,63,803	0/0:35,0:35:99:0,102,1325	0/0:32,0:32:96.30:0,96,1232	0/0:32,0:32:93.27:0,93,1176	0/0:12,0:12:36.12:0,36,467
chr10	80249504	.	G	GA	15942.77	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-11.573;DP=563;FS=0.346;HRun=0;HaplotypeScore=51.4739;InbreedingCoeff=0.9967;MQ=76.32;MQ0=0;MQRankSum=-4.483;QD=40.57;ReadPosRankSum=4.461;VQSLOD=5.0895;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:45.15:704,45,0	1/1:0,8:8:21.07:335,21,0	0/0:21,0:20:54.07:0,54,666	0/0:17,0:16:35.61:0,36,475	1/1:0,33:33:83.88:1255,84,0	1/1:0,27:27:75.26:1190,75,0	0/0:12,0:12:33.11:0,33,454	1/1:0,30:30:87.24:1281,87,0	0/0:16,0:16:47.98:0,48,623	1/1:0,23:23:63.21:1002,63,0	1/1:0,25:25:75.19:1155,75,0	0/0:20,0:20:60.19:0,60,812	1/1:2,28:30:66.09:1049,66,0	1/1:1,18:19:42.14:670,42,0	1/1:0,16:16:36.12:560,36,0	0/0:16,0:16:48.12:0,48,618	1/1:0,18:18:42.14:667,42,0	1/1:0,10:11:30.10:450,30,0	1/1:2,17:19:45.12:668,45,0	1/1:1,20:21:60.08:882,60,0	1/1:0,20:20:57.19:909,57,0	0/0:22,0:22:63.15:0,63,825	0/0:20,0:20:60.20:0,60,837	0/0:26,0:26:75.22:0,75,996	1/1:0,23:23:60.20:957,60,0	1/1:0,13:13:39.11:596,39,0	1/1:0,34:34:87.30:1381,87,0	1/1:1,5:6:15.02:231,15,0
chr10	80249632	.	C	CATAAACATGAAGCCATGTA	48456.80	PASS	AB=0.533;AC=30;AF=0.536;AN=56;BaseQRankSum=-6.313;DP=516;FS=0.000;HRun=0;HaplotypeScore=250.3722;InbreedingCoeff=0.7820;MQ=83.45;MQ0=0;MQRankSum=-15.715;QD=173.06;ReadPosRankSum=0.746;VQSLOD=4.6698;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:1,0:15:15.19:15,0,859	1/1:4,4:9:24.08:2067,24,0	0/0:22,0:22:66.21:0,66,2872	0/0:18,0:18:51.15:0,51,2307	1/1:9,18:27:72.25:5996,72,0	0/0:31,0:31:90.31:0,90,4483	0/0:16,0:16:48.16:0,48,2375	1/1:33,0:32:93.28:4807,93,0	0/0:13,0:13:39.13:0,39,1815	1/1:13,18:33:93.32:7523,93,0	1/1:5,12:23:45.15:4021,45,0	0/0:13,0:13:39.13:0,39,2025	0/0:1,0:19:1.43:0,1,1212	0/1:3,0:17:19.06:19,0,965	1/1:16,5:27:63.22:4881,63,0	0/0:14,0:14:42.14:0,42,2103	1/1:5,2:9:18.06:1564,18,0	1/1:1,1:2:6.02:548,6,0	1/1:10,3:15:45.11:2232,45,0	1/1:13,3:19:42.14:3004,42,0	1/1:1,3:5:9.03:826,9,0	0/0:28,0:28:84.27:0,84,4060	0/0:25,0:25:75.26:0,75,3910	0/0:19,0:19:57.18:0,57,2546	1/1:9,10:20:57.20:4624,57,0	0/0:1,0:18:54.18:0,54,1531	1/1:8,14:24:72.25:6279,72,0	1/1:0,0:1:3.01:50,3,0
chr10	80249633	.	TGGCA	T	2942.96	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.715;DP=506;FS=4.463;HRun=0;HaplotypeScore=186.1811;InbreedingCoeff=0.9137;MQ=83.04;MQ0=0;MQRankSum=-1.651;QD=42.65;ReadPosRankSum=1.021;VQSLOD=3.8141;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:39.13:596,39,0	0/0:8,0:8:23.07:0,23,358	0/0:21,0:21:63.22:0,63,1732	0/0:18,0:18:54.16:0,54,1479	0/0:28,0:28:45.35:0,45,1294	0/0:32,0:32:96.33:0,96,2610	0/0:16,0:16:48.15:0,48,1314	0/0:34,0:34:99:0,99,2059	0/0:13,0:13:39.13:0,39,1129	0/0:32,0:31:93.26:0,93,1964	0/0:21,0:21:48.92:0,49,883	0/0:13,0:13:39.12:0,39,1060	1/1:1,18:19:57.19:862,57,0	1/1:2,14:16:48.16:792,48,0	0/0:25,0:25:44.94:0,45,693	0/0:14,0:14:42.14:0,42,1204	0/0:7,0:7:15.05:0,15,308	0/0:2,0:2:6.02:0,6,126	0/0:14,0:14:42.14:0,42,877	0/0:18,0:18:32.94:0,33,505	0/0:4,0:4:7.84:0,8,116	0/0:28,0:28:84.29:0,84,2408	0/0:25,0:25:75.26:0,75,2137	0/0:18,0:18:54.19:0,54,1549	0/0:20,0:20:54.05:0,54,928	1/1:1,17:18:54.18:819,54,0	0/0:26,0:26:75.21:0,75,1546	1/1:0,1:1:3.01:40,3,0
chr10	80249637	.	A	AT	2489.51	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.901;DP=531;FS=10.773;HRun=0;HaplotypeScore=168.1756;InbreedingCoeff=0.9467;MQ=80.40;MQ0=0;MQRankSum=-1.549;QD=30.36;ReadPosRankSum=-0.584;VQSLOD=1.8014;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,1:17:45.07:509,45,0	0/0:8,0:8:16.51:0,17,264	0/0:19,0:19:57.19:0,57,777	0/0:18,0:18:54.16:0,54,735	0/0:29,0:29:44.27:0,44,867	0/0:28,0:28:84.28:0,84,1175	0/0:14,0:14:42.14:0,42,587	0/0:38,0:38:99:0,111,1549	0/0:13,0:13:39.12:0,39,530	0/0:34,0:33:93.31:0,93,1293	0/0:21,0:21:45.98:0,46,596	0/0:13,0:13:39.13:0,39,544	1/1:20,3:23:66.13:764,66,0	1/1:14,3:17:48.13:614,48,0	0/0:27,0:27:50.94:0,51,582	0/0:13,0:13:39.13:0,39,544	0/0:7,0:7:15.05:0,15,209	0/0:3,0:3:6.02:0,6,84	0/0:16,0:16:48.16:0,48,669	0/0:22,0:22:32.94:0,33,371	0/0:6,0:6:10.58:0,11,130	0/0:29,0:29:84.28:0,84,1174	0/0:26,0:26:75.24:0,75,1032	0/0:18,0:18:54.17:0,54,738	0/0:21,0:21:57.06:0,57,726	1/1:21,1:22:60.14:683,60,0	0/0:26,0:26:75.21:0,75,1008	1/1:3,0:3:9.02:91,9,0
chr10	80249878	.	A	ATT	18794.73	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=1.987;DP=633;FS=12.893;HRun=1;HaplotypeScore=88.3231;InbreedingCoeff=0.9894;MQ=84.51;MQ0=3;MQRankSum=-2.594;QD=49.85;ReadPosRankSum=1.297;VQSLOD=3.5702;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:8:15.05:0,15,230	1/1:1,9:10:27.09:521,27,0	0/0:19,0:19:48.02:0,48,657	0/0:23,0:23:66.18:0,66,969	1/1:1,30:31:87.21:1600,87,0	0/0:38,0:38:99:0,105,1496	0/0:14,0:14:42.13:0,42,620	1/1:3,31:34:93.29:1714,93,0	0/0:14,0:14:42.14:0,42,643	1/1:0,36:37:99:2041,108,0	1/1:2,30:30:84.20:1520,84,0	0/0:21,0:21:57.17:0,57,828	0/0:22,0:22:66.21:0,66,986	0/0:16,0:16:45.15:0,45,689	1/1:0,25:24:69.24:1333,69,0	0/0:25,0:25:72.23:0,72,1080	1/1:0,14:14:36.12:694,36,0	1/1:0,3:3:9.03:174,9,0	1/1:1,28:30:90.25:1590,90,0	1/1:2,31:34:87.30:1680,87,0	1/1:0,23:23:57.20:1101,57,0	0/0:21,0:21:63.19:0,63,922	0/0:26,0:26:72.19:0,72,1035	0/0:8,0:8:24.08:0,24,367	1/1:1,27:28:78.27:1506,78,0	1/1:1,27:27:78.24:1429,78,0	1/1:4,25:30:69.15:1254,69,0	1/1:2,16:18:33.11:637,33,0
chr10	80251050	.	A	ATG	7880.43	PASS	AB=0.667;AC=25;AF=0.446;AN=56;BaseQRankSum=-14.560;DP=587;FS=9.378;HRun=0;HaplotypeScore=75.2490;InbreedingCoeff=0.9311;MQ=73.09;MQ0=3;MQRankSum=0.900;QD=29.96;ReadPosRankSum=0.871;VQSLOD=5.8118;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:9.13:0,9,455	1/1:1,5:6:9.03:146,9,0	0/0:25,0:22:50.29:0,50,540	0/0:27,0:27:34.43:0,34,492	1/1:5,23:29:54.18:876,54,0	0/0:35,0:36:87.07:0,87,1014	0/0:16,0:17:38.94:0,39,440	1/1:16,25:41:51.66:1059,52,0	0/0:17,0:17:39.12:0,39,476	1/1:5,29:33:84.28:1338,84,0	1/1:5,19:23:14.43:559,14,0	0/0:30,0:30:78.21:0,78,916	0/0:18,0:18:33.10:0,33,403	0/0:27,0:27:78.25:0,78,952	1/1:2,20:22:17.55:790,18,0	0/0:9,0:9:21.05:0,21,244	1/1:3,8:11:21.04:340,21,0	0/1:4,4:8:1.57:153,0,2	1/1:8,10:19:36.10:546,36,0	1/1:4,12:16:33.11:535,33,0	1/1:4,14:18:30.10:486,30,0	0/0:13,0:13:36.10:0,36,428	0/0:14,0:14:36.11:0,36,440	0/0:22,0:22:51.08:0,51,568	1/1:4,15:19:39.13:632,39,0	0/0:30,0:32:80.89:0,81,921	1/1:4,12:15:11.18:419,11,0	0/0:10,0:10:24.03:0,24,265
chr10	80251205	.	G	GA	2670.01	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.177;DP=489;FS=9.501;HRun=2;HaplotypeScore=48.3356;InbreedingCoeff=0.9609;MQ=79.58;MQ0=0;MQRankSum=-0.215;QD=35.60;ReadPosRankSum=2.441;VQSLOD=3.5461;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:36.11:0,36,445	0/0:9,0:9:27.08:0,27,335	0/0:14,0:14:32.12:0,32,363	0/0:13,0:13:39.07:0,39,452	0/0:23,0:23:63.18:0,63,768	0/0:25,0:25:72.23:0,72,892	0/0:15,0:15:45.14:0,45,558	0/0:37,0:37:99:0,111,1364	0/0:12,0:12:36.10:0,36,434	0/0:19,0:19:57.18:0,57,707	0/0:15,0:15:45.14:0,45,558	0/0:23,0:23:63.18:0,63,768	1/1:2,14:16:42.14:600,42,0	1/1:1,18:19:51.17:735,51,0	0/0:21,0:21:63.20:0,63,781	0/0:4,0:4:12.04:0,12,149	0/0:12,0:12:36.11:0,36,446	0/0:7,0:7:15.05:0,15,185	0/0:17,0:17:45.14:0,45,558	0/0:25,0:25:72.23:0,72,893	0/0:20,0:20:57.18:0,57,707	0/0:10,0:10:30.08:0,30,358	0/0:18,0:18:54.17:0,54,669	0/0:14,0:14:42.13:0,42,521	0/0:25,0:25:72.22:0,72,881	1/1:3,25:28:6.84:984,7,0	0/0:19,0:18:57.18:0,57,706	1/1:0,12:12:36.12:505,36,0
chr10	80251306	.	GT	G	4245.97	PASS	AB=0.935;AC=38;AF=0.679;AN=56;BaseQRankSum=1.791;DP=337;FS=0.554;HRun=11;HaplotypeScore=43.6359;InbreedingCoeff=0.6747;MQ=80.71;MQ0=0;MQRankSum=-1.588;QD=15.00;ReadPosRankSum=1.306;VQSLOD=4.8808;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:13:22.88:65,23,0	1/1:2,2:4:5.99:49,6,0	0/0:9,1:10:12.02:0,12,115	0/1:12,0:10:7.04:7,0,65	1/1:4,22:26:53.03:442,53,0	1/1:2,8:10:23.97:197,24,0	0/0:9,0:9:24.06:0,24,256	1/1:7,19:26:56.87:462,57,0	0/1:9,1:10:0.58:1,0,200	1/1:1,15:16:38.91:318,39,0	1/1:1,15:16:25.01:325,25,0	0/0:12,0:12:24.06:0,24,256	1/1:1,10:11:26.97:221,27,0	1/1:1,11:12:29.96:246,30,0	1/1:0,13:13:32.96:271,33,0	0/0:3,0:3:6.02:0,6,64	1/1:2,12:14:29.96:246,30,0	1/1:0,3:3:5.99:49,6,0	1/1:3,12:15:35.93:295,36,0	1/1:6,10:16:32.93:271,33,0	1/1:1,6:7:17.97:148,18,0	0/1:6,1:7:9.61:10,0,113	0/0:5,0:7:11.86:0,12,110	0/0:7,0:7:18.05:0,18,192	1/1:1,13:14:38.95:320,39,0	0/1:20,1:20:21:21,0,151	1/1:2,14:17:24.54:281,25,0	0/0:6,0:6:17.17:0,17,91
chr10	80251716	.	A	AC	1407.71	PASS	AB=0.601;AC=5;AF=0.089;AN=56;BaseQRankSum=13.073;DP=645;FS=0.000;HRun=0;HaplotypeScore=85.5229;InbreedingCoeff=0.2705;MQ=91.27;MQ0=0;MQRankSum=-11.914;QD=15.82;ReadPosRankSum=2.023;VQSLOD=5.4671;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.30:0,90,1251	0/0:11,0:11:33.11:0,33,461	0/0:28,0:28:81.21:0,81,1064	0/0:26,0:26:78.25:0,78,1064	0/0:19,0:19:57.19:0,57,797	0/0:26,0:26:75.24:0,75,1032	0/0:21,0:21:63.19:0,63,862	0/0:29,0:29:87.27:0,87,1171	0/0:29,0:29:87.29:0,87,1214	0/0:37,0:37:99:0,111,1552	0/0:23,0:23:66.21:0,66,906	0/0:25,0:25:75.25:0,75,1047	0/1:13,22:35:99:482,0,222	0/1:10,15:25:99:455,0,109	0/0:31,0:31:93.28:0,93,1260	0/0:24,0:24:72.24:0,72,1006	0/0:12,0:12:33.11:0,33,461	0/0:12,0:12:36.08:0,36,481	0/0:16,0:16:48.16:0,48,672	0/0:13,0:13:39.13:0,39,546	0/0:37,0:37:99:0,108,1507	0/0:23,0:23:66.22:0,66,922	0/0:16,0:16:48.16:0,48,668	0/0:24,0:24:72.24:0,72,1006	0/0:11,0:11:33.11:0,33,461	0/1:6,21:27:99:524,0,103	0/0:30,0:30:90.30:0,90,1258	1/1:0,2:2:6.01:62,6,0
chr10	80251717	.	T	TAGGGAA	6494.34	PASS	AB=0.563;AC=7;AF=0.125;AN=56;BaseQRankSum=12.515;DP=645;FS=8.729;HRun=0;HaplotypeScore=141.7944;InbreedingCoeff=0.7988;MQ=91.27;MQ0=0;MQRankSum=-12.583;QD=72.97;ReadPosRankSum=-0.876;VQSLOD=5.1988;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.23:0,93,2203	0/0:11,0:11:33.11:0,33,836	0/0:29,0:29:84.27:0,84,1902	0/0:25,0:25:75.19:0,75,1612	0/0:20,0:20:57.18:0,57,1402	0/0:25,0:25:75.24:0,75,1869	0/0:21,0:21:63.17:0,63,1452	0/0:26,0:26:78.25:0,78,1851	0/0:29,0:29:87.28:0,87,2118	0/0:37,0:37:99:0,111,2600	0/0:24,0:24:66.20:0,66,1573	0/0:25,0:25:75.26:0,75,1917	1/1:13,21:35:99:2550,105,0	1/1:10,15:25:75.11:1793,75,0	0/0:30,0:30:87.21:0,87,2141	0/0:24,0:24:72.23:0,72,1727	0/0:13,0:13:33.10:0,33,787	0/0:12,0:12:33.11:0,33,821	0/0:17,0:17:48.16:0,48,1214	0/0:14,0:14:39.13:0,39,999	0/0:37,0:37:99:0,111,2622	0/0:22,0:22:66.21:0,66,1622	0/0:17,0:17:48.13:0,48,1091	0/0:24,0:24:72.23:0,72,1762	0/0:11,0:11:33.10:0,33,792	0/1:6,20:27:49.55:2026,0,50	0/0:31,0:31:90.29:0,90,2234	1/1:1,1:2:6.02:126,6,0
chr10	80252071	.	TAC	T	2028.85	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.392;DP=575;FS=8.669;HRun=0;HaplotypeScore=65.6285;InbreedingCoeff=0.9810;MQ=68.31;MQ0=1;MQRankSum=0.644;QD=26.35;ReadPosRankSum=2.719;VQSLOD=4.4432;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.20:0,69,1095	0/0:8,1:9:20.82:0,21,345	0/0:17,0:14:27.09:0,27,449	0/0:19,0:17:11.57:0,12,434	0/0:30,0:30:81.28:0,81,1354	0/0:20,0:20:51.14:0,51,799	0/0:16,0:16:42.13:0,42,676	0/0:34,0:34:78.25:0,78,1256	0/0:20,0:20:57.14:0,57,874	0/0:16,0:16:45.15:0,45,739	0/0:29,0:29:75.26:0,75,1254	0/0:16,0:16:42.14:0,42,699	1/1:1,23:24:54.17:687,54,0	1/1:0,15:15:39.12:496,39,0	0/0:17,0:17:48.15:0,48,772	0/0:17,0:17:45.14:0,45,727	0/0:18,0:18:45.15:0,45,736	0/0:6,0:6:18.06:0,18,283	0/0:19,0:19:51.15:0,51,781	0/0:30,0:30:81.21:0,81,1247	0/0:14,0:14:36.12:0,36,602	0/0:27,1:27:43.12:0,43,1259	0/0:20,0:20:57.19:0,57,953	0/0:7,0:7:21.06:0,21,326	0/0:34,0:34:84.26:0,84,1345	1/1:7,21:28:15.99:738,16,0	0/0:35,0:35:96.28:0,96,1523	1/1:3,7:10:21.07:267,21,0
chr10	80252256	.	TA	T	1406.56	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.683;DP=532;FS=2.121;HRun=1;HaplotypeScore=57.8416;InbreedingCoeff=0.9951;MQ=68.88;MQ0=0;MQRankSum=0.095;QD=35.16;ReadPosRankSum=1.867;VQSLOD=3.7653;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.15:0,69,907	0/0:8,0:8:24.04:0,24,288	0/0:7,0:7:21.04:0,21,276	0/0:10,0:10:26.98:0,27,293	0/0:34,0:34:99:0,102,1396	0/0:21,0:21:63.14:0,63,840	0/0:12,0:12:36.09:0,36,477	0/0:31,0:31:93.25:0,93,1201	0/0:22,0:22:66.16:0,66,867	0/0:21,0:21:63.16:0,63,807	0/0:26,0:26:78.15:0,78,1052	0/0:16,0:16:47.88:0,48,637	0/0:24,0:24:66.26:0,66,375	0/0:20,0:20:54.56:0,55,310	0/0:16,0:16:48.14:0,48,667	0/0:19,0:19:57.18:0,57,797	0/0:18,0:16:51.13:0,51,688	0/0:9,0:9:27.07:0,27,362	0/0:26,0:26:78.20:0,78,1028	0/0:18,0:18:54.15:0,54,736	0/0:12,0:12:36.09:0,36,476	0/0:17,0:17:51.14:0,51,691	0/0:21,0:21:60.63:0,61,802	0/0:9,0:9:27.09:0,27,385	0/0:17,0:17:51.17:0,51,727	1/1:1,26:27:52.25:984,52,0	0/0:34,0:34:99:0,102,1408	1/1:0,13:13:39.13:544,39,0
chr10	80252257	.	A	AT	1310.27	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.821;DP=533;FS=0.623;HRun=6;HaplotypeScore=58.9926;InbreedingCoeff=0.9822;MQ=69.71;MQ0=0;MQRankSum=-0.525;QD=29.12;ReadPosRankSum=0.791;VQSLOD=4.2159;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.14:0,66,667	0/0:8,0:8:18.04:0,18,183	0/0:8,0:8:15.90:0,16,146	0/0:10,0:10:21.03:0,21,206	0/0:33,0:33:96.22:0,96,979	0/0:20,0:20:57.13:0,57,581	0/0:12,0:12:33.07:0,33,336	0/0:31,0:31:81.17:0,81,821	0/0:21,0:21:54.12:0,54,551	0/0:20,0:20:48.10:0,48,485	0/0:26,0:26:69.11:0,69,689	0/0:16,0:16:42.07:0,42,422	1/1:4,21:25:60.19:753,60,0	1/1:1,19:20:54.17:679,54,0	0/0:16,0:16:48.11:0,48,490	0/0:19,0:19:57.13:0,57,581	0/0:18,0:16:51.11:0,51,519	0/0:9,0:9:24.01:0,24,234	0/0:25,0:25:69.15:0,69,699	0/0:19,0:19:51.11:0,51,520	0/0:12,0:12:33.06:0,33,329	0/0:17,0:17:48.08:0,48,476	0/0:22,0:22:54.57:0,55,544	0/0:9,0:9:24.05:0,24,245	0/0:17,0:17:48.11:0,48,490	0/0:27,0:27:33.34:0,33,87	0/0:35,0:35:90.19:0,90,915	0/0:14,0:14:20.21:0,20,52
chr10	80254141	.	A	AAC	402.26	PASS	AB=0.936;AC=19;AF=0.396;AN=48;BaseQRankSum=-0.102;DP=398;FS=3.870;HRun=0;HaplotypeScore=82.3177;InbreedingCoeff=0.0612;MQ=62.02;MQ0=19;MQRankSum=-0.694;QD=2.25;ReadPosRankSum=-0.459;VQSLOD=1.2770;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:29:13.03:0,13,75	./.	./.	./.	1/1:11,0:11:3.01:40,3,0	0/0:8,0:14:5.68:0,6,28	0/0:18,0:17:11.99:0,12,114	./.	0/0:10,0:9:6.73:0,7,48	1/1:14,3:17:11.83:137,12,0	1/1:10,1:12:2.82:32,3,0	0/0:9,0:9:5.96:0,6,51	0/1:13,0:15:10.94:19,0,11	0/0:8,0:7:3.52:0,4,17	0/1:10,1:14:15.09:61,0,15	0/0:15,0:15:11.45:0,11,88	0/1:17,1:17:22.53:35,0,23	0/1:12,0:7:4.93:5,0,26	0/1:11,3:11:10.52:83,0,11	0/1:11,2:10:30.95:48,0,31	0/1:11,0:10:8.92:27,0,9	0/0:18,0:18:6.49:0,6,65	0/0:9,0:11:2.84:0,3,14	0/0:20,0:19:17.96:0,18,191	0/1:11,0:12:8.27:8,0,8	0/1:7,0:7:2.58:3,0,17	1/1:10,0:11:2.14:24,2,0	1/1:8,0:9:5.31:26,5,0
chr10	80254185	.	CA	C	307.88	PASS	AB=0.776;AC=4;AF=0.071;AN=56;BaseQRankSum=6.955;DP=534;FS=3.138;HRun=1;HaplotypeScore=83.6009;InbreedingCoeff=0.0540;MQ=49.96;MQ0=56;MQRankSum=-5.618;QD=6.69;ReadPosRankSum=2.040;VQSLOD=1.0035;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:28:35.71:0,36,328	0/0:5,0:4:5.75:0,6,50	0/0:47,0:7:14.11:0,14,192	0/0:48,0:12:15.51:0,16,181	0/0:15,0:15:27.09:0,27,345	0/0:28,1:29:28.46:0,28,565	0/0:22,0:21:48.58:0,49,620	0/0:23,0:12:36.12:0,36,453	0/0:16,0:16:35.33:0,35,442	0/0:19,0:17:51.15:0,51,641	0/0:13,0:13:15.52:0,16,204	0/0:15,0:15:27.09:0,27,359	0/1:14,2:13:24.07:177,0,24	0/1:8,3:9:2.81:62,0,3	0/0:15,0:15:30.09:0,30,371	0/0:17,0:16:35.17:0,35,423	0/0:17,0:15:38.95:0,39,493	0/0:15,0:10:24.89:0,25,280	0/0:22,0:16:43.67:0,44,526	0/0:15,0:11:26.55:0,27,299	0/0:17,0:11:24.17:0,24,293	0/0:13,0:13:26.86:0,27,323	0/0:16,0:13:17.21:0,17,166	0/0:31,0:29:51.17:0,51,701	0/0:12,0:10:3.37:0,3,213	0/1:9,4:8:56.48:121,0,56	0/0:12,0:10:21.04:0,21,252	0/1:3,3:5:56.92:57,0,60
chr10	80254186	.	A	AC	402.33	PASS	AB=0.866;AC=5;AF=0.089;AN=56;BaseQRankSum=7.434;DP=535;FS=1.649;HRun=1;HaplotypeScore=85.2594;InbreedingCoeff=-0.0607;MQ=49.82;MQ0=56;MQRankSum=-5.829;QD=5.09;ReadPosRankSum=-1.224;VQSLOD=-0.0809;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,1:27:16.93:17,0,263	0/0:5,0:4:0.68:0,1,34	0/0:49,0:7:20.08:0,20,214	0/0:51,0:15:16.85:0,17,187	0/0:14,0:14:26.30:0,26,312	0/0:29,0:28:47.89:0,48,597	0/0:22,0:21:40.66:0,41,564	0/0:23,0:12:36.08:0,36,439	0/0:15,0:15:32.86:0,33,399	0/0:19,0:17:45.07:0,45,487	0/0:13,0:13:11.90:0,12,164	0/0:14,0:14:23.60:0,24,336	0/1:10,5:12:32.02:191,0,32	0/1:9,2:9:6.29:71,0,6	0/0:16,0:16:24.18:0,24,275	0/0:17,0:16:28.08:0,28,346	0/0:17,0:15:34.62:0,35,400	0/0:15,0:10:22.74:0,23,248	0/0:21,0:15:33.50:0,33,426	0/0:15,0:11:25.59:0,26,278	0/0:15,1:11:3.59:0,4,257	0/0:12,0:12:24.06:0,24,291	0/0:16,0:13:14.97:0,15,160	0/0:32,0:30:51.16:0,51,651	0/0:12,0:10:4.09:0,4,226	0/1:9,4:8:53.78:181,0,54	0/0:12,0:10:19.59:0,20,218	0/1:8,0:7:37.56:57,0,38
chr10	80254190	.	AC	A	300.20	PASS	AB=0.787;AC=6;AF=0.107;AN=56;BaseQRankSum=5.876;DP=515;FS=0.801;HRun=2;HaplotypeScore=80.9758;InbreedingCoeff=0.2700;MQ=52.54;MQ0=54;MQRankSum=-3.803;QD=5.56;ReadPosRankSum=-0.091;VQSLOD=0.4489;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:24:36.88:0,37,317	0/0:5,0:4:3.01:0,3,40	0/0:54,0:10:22.97:0,23,278	0/0:54,0:18:29.76:0,30,326	0/0:13,0:13:24.07:0,24,306	0/0:29,0:28:50.61:0,51,617	0/0:20,0:19:43.81:0,44,548	0/0:24,0:14:15.42:0,15,478	0/0:13,0:13:29.68:0,30,374	0/0:16,0:14:4.59:0,5,427	0/0:12,0:12:15.52:0,16,201	0/0:12,0:12:16.56:0,17,270	0/1:11,4:12:34.61:116,0,35	0/1:5,4:7:5.11:47,0,5	0/0:13,0:13:26:0,26,346	0/0:15,0:14:27.29:0,27,321	0/0:15,0:14:35.93:0,36,475	0/0:13,3:11:26.67:0,27,340	0/0:23,0:17:40.19:0,40,518	0/0:16,0:12:28.40:0,28,279	0/0:18,0:12:10.69:0,11,239	0/0:8,0:8:20.96:0,21,264	0/0:15,0:12:17.64:0,18,196	0/0:30,0:28:48.13:0,48,640	0/0:11,0:9:23.66:0,24,278	0/1:6,6:8:33.96:109,0,34	0/1:10,0:8:4.45:4,0,213	1/1:3,5:7:14.93:146,15,0
chr10	80254191	.	C	CA	402.04	PASS	AB=0.887;AC=6;AF=0.107;AN=56;BaseQRankSum=6.279;DP=508;FS=0.000;HRun=1;HaplotypeScore=81.0145;InbreedingCoeff=0.2453;MQ=53.93;MQ0=52;MQRankSum=-5.224;QD=6.70;ReadPosRankSum=-0.419;VQSLOD=0.1452;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:24:37.56:0,38,370	0/0:5,0:4:3.01:0,3,40	0/0:55,0:11:28.66:0,29,292	0/0:55,0:19:31.10:0,31,332	0/0:12,0:13:22.88:0,23,284	0/0:29,0:28:51.60:0,52,648	0/0:19,0:18:43.33:0,43,540	0/0:23,0:14:15.42:0,15,481	0/0:11,0:11:30.08:0,30,386	0/1:16,0:14:0.72:1,0,374	0/0:12,0:12:15:0,15,174	0/0:12,0:12:7.95:0,8,260	0/1:11,2:12:53.74:153,0,54	0/1:8,0:7:12.10:62,0,12	0/0:13,0:13:23.32:0,23,321	0/0:15,0:14:30.06:0,30,360	0/0:13,0:13:33.41:0,33,440	0/0:15,0:10:25.30:0,25,335	0/0:22,0:16:42.65:0,43,516	0/0:16,0:12:25.40:0,25,281	0/0:18,0:12:11.11:0,11,255	0/0:8,0:8:21.06:0,21,270	0/0:14,0:12:18.04:0,18,221	0/0:29,0:27:48.13:0,48,630	0/0:11,0:9:24.06:0,24,300	0/1:10,0:8:33.83:123,0,34	0/0:10,0:8:16.34:0,16,228	1/1:6,2:7:15.05:184,15,0
chr10	80254245	.	TTCTCTC	T	1113.83	PASS	AB=1.000;AC=18;AF=0.409;AN=44;BaseQRankSum=1.169;DP=363;FS=0.000;HRun=0;HaplotypeScore=88.4998;InbreedingCoeff=0.4521;MQ=77.85;MQ0=18;MQRankSum=2.194;QD=10.13;ReadPosRankSum=3.247;VQSLOD=1.0822;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:10:9:137,9,0	0/0:6,0:6:3:0,3,26	./.	0/0:35,0:23:0.47:0,0,1	./.	0/0:23,0:22:3.01:0,3,71	0/0:13,0:13:18.53:0,19,377	0/0:26,0:26:0.89:0,1,2	./.	1/1:8,0:7:3.01:57,3,0	./.	0/0:8,0:8:6.02:0,6,98	0/0:8,0:6:12.04:0,12,259	0/0:5,0:3:3.01:0,3,49	1/1:14,0:14:6.02:105,6,0	0/0:8,0:8:12.04:0,12,231	0/0:15,0:14:14.95:0,15,125	1/1:9,0:7:8.83:64,9,0	1/1:15,1:16:1.74:57,2,0	./.	1/1:14,0:12:30.10:538,30,0	0/1:9,0:9:47.33:47,0,100	0/0:10,0:11:3.01:0,3,53	0/0:20,0:20:12.51:0,13,246	1/1:9,0:7:6.02:110,6,0	0/1:11,0:8:37.98:38,0,201	1/1:9,0:9:6.02:108,6,0	./.
chr10	80254469	.	GT	G	1345.80	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=6.873;DP=305;FS=5.055;HRun=1;HaplotypeScore=155.4665;InbreedingCoeff=0.3917;MQ=43.85;MQ0=0;MQRankSum=-7.725;QD=4.72;ReadPosRankSum=8.529;VQSLOD=0.2568;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:37.22:121,37,0	1/1:4,0:4:7.18:30,7,0	0/0:6,0:2:0.67:0,1,31	0/0:9,0:8:3.42:0,3,65	1/1:12,0:12:15.36:67,15,0	1/1:10,0:10:17.51:55,18,0	1/1:9,0:9:15.68:57,16,0	1/1:22,0:20:10.10:37,10,0	1/1:12,0:12:24.81:82,25,0	1/1:7,0:7:7.58:21,8,0	1/1:16,0:16:27.57:111,28,0	0/1:4,0:4:3.89:4,0,4	1/1:12,1:13:5.99:49,6,0	1/1:9,0:9:5.12:33,5,0	0/1:10,0:10:0.03:26,0,0	1/1:14,0:14:19.46:78,19,0	1/1:8,0:8:7.39:35,7,0	0/0:5,0:5:1.48:0,1,11	0/1:8,0:8:1.94:13,0,2	1/1:10,2:12:29.15:114,29,0	1/1:10,0:10:7.47:28,7,0	1/1:16,0:16:18.68:73,19,0	1/1:18,2:20:39.60:154,40,0	1/1:11,0:11:16.75:58,17,0	1/1:20,0:20:29.85:110,30,0	1/1:7,0:7:8.09:31,8,0	1/1:8,0:8:14.43:51,14,0	1/1:5,0:5:8.47:24,8,0
chr10	80254952	.	ATG	A	1043.82	PASS	AB=0.890;AC=28;AF=0.583;AN=48;BaseQRankSum=1.895;DP=513;FS=0.821;HRun=0;HaplotypeScore=74.7196;InbreedingCoeff=0.2432;MQ=63.86;MQ0=11;MQRankSum=-0.025;QD=3.48;ReadPosRankSum=1.433;VQSLOD=1.9137;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:28:7.58:0,8,68	1/1:5,3:8:0.41:85,0,0	./.	./.	1/1:19,8:27:9.02:97,9,0	0/0:13,0:19:2.49:0,2,22	0/0:15,0:14:5.88:0,6,81	./.	0/1:9,1:10:23.14:23,0,57	1/1:15,8:23:9.48:95,9,0	1/1:12,1:15:5.85:46,6,0	0/0:11,0:10:6.02:0,6,88	1/1:8,0:17:11.59:53,12,0	1/1:5,6:11:6.02:64,6,0	1/1:6,7:12:6.02:64,6,0	0/1:12,3:15:43.23:43,0,198	0/1:20,3:22:12.38:125,0,12	0/1:11,1:12:36.93:37,0,49	./.	1/1:11,7:18:9.02:97,9,0	1/1:25,3:28:7.66:152,8,0	0/0:17,0:17:13.96:0,14,169	0/0:11,0:10:14.99:0,15,161	0/1:17,4:21:47.88:48,0,203	1/1:17,3:20:3.01:32,3,0	0/0:20,0:19:16.81:0,17,106	1/1:12,7:18:11.87:128,12,0	0/1:18,1:16:17.14:17,0,101
chr10	80255290	.	C	CT	6337.90	PASS	AB=0.571;AC=24;AF=0.429;AN=56;BaseQRankSum=-12.164;DP=578;FS=1.104;HRun=10;HaplotypeScore=63.8673;InbreedingCoeff=0.8757;MQ=71.82;MQ0=0;MQRankSum=-0.499;QD=20.92;ReadPosRankSum=-0.212;VQSLOD=5.5928;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:80.78:0,81,648	1/1:0,9:9:21.05:224,21,0	0/0:17,0:17:29.93:0,30,237	0/0:15,0:14:19.58:0,20,138	0/1:5,16:20:0.64:317,0,1	0/0:11,0:11:26.97:0,27,222	0/0:10,0:10:29.97:0,30,246	1/1:7,22:31:47.22:666,47,0	0/0:19,0:19:47.92:0,48,392	1/1:8,21:29:62.06:665,62,0	1/1:4,20:25:10.84:514,11,0	0/0:19,0:19:47.92:0,48,394	0/0:0,0:14:26.48:0,26,77	0/0:1,0:13:19.25:0,19,66	1/1:3,16:19:24.07:398,24,0	0/0:21,1:22:24.90:0,25,403	1/1:4,19:23:48.12:512,48,0	1/1:5,15:20:39.10:416,39,0	1/1:1,22:23:44.49:655,44,0	1/1:5,18:24:42.02:423,42,0	1/1:2,15:17:36.09:384,36,0	0/0:17,0:18:43.68:0,44,342	0/0:9,0:10:14:0,14,104	0/0:33,0:33:68.79:0,69,553	1/1:5,18:23:17.48:391,17,0	0/0:20,0:21:52.94:0,53,421	0/1:10,29:39:27.94:774,0,28	0/0:16,0:17:43.79:0,44,340
chr10	80256309	.	AGT	A	1692.39	PASS	AB=0.876;AC=17;AF=0.304;AN=56;BaseQRankSum=8.536;DP=590;FS=5.442;HRun=0;HaplotypeScore=71.6495;InbreedingCoeff=0.2785;MQ=56.43;MQ0=23;MQRankSum=0.593;QD=6.99;ReadPosRankSum=2.161;VQSLOD=2.7350;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,15:25:37.59:403,38,0	0/0:5,0:6:18.05:0,18,249	0/0:47,0:10:7.84:0,8,87	0/0:50,0:22:24.03:0,24,291	0/0:20,1:21:0.77:0,1,460	0/1:28,0:28:6.67:29,0,7	0/1:16,1:17:4.76:5,0,393	0/1:18,1:17:14.26:14,0,226	0/0:15,0:15:30.10:0,30,467	0/0:26,0:26:33.11:0,33,512	0/0:20,0:22:45.14:0,45,685	0/1:10,1:12:13.33:13,0,410	1/1:3,9:12:18.05:212,18,0	1/1:8,9:17:27.08:317,27,0	0/1:21,4:25:99:107,0,601	0/1:13,1:13:5.25:5,0,371	0/1:25,2:26:9.98:10,0,764	0/0:19,0:19:31.29:0,31,425	0/0:16,0:12:21.04:0,21,297	0/1:16,2:18:40.56:41,0,345	0/0:21,1:21:9.67:0,10,547	0/0:23,1:25:9.81:0,10,577	0/0:17,0:17:39.57:0,40,558	0/0:13,0:13:30.08:0,30,450	0/0:26,0:27:9.94:0,10,584	0/1:2,13:16:2.42:416,0,2	0/0:21,1:22:15.81:0,16,668	1/1:2,8:11:26.91:297,27,0
chr10	80257355	.	GC	G	699.31	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=4.471;DP=425;FS=15.999;HRun=9;HaplotypeScore=47.7001;InbreedingCoeff=0.7275;MQ=89.33;MQ0=1;MQRankSum=-0.956;QD=12.71;ReadPosRankSum=-1.585;VQSLOD=1.1002;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:18:34.26:0,34,193	0/0:9,0:9:24.07:0,24,277	0/0:26,0:25:20.50:0,21,476	0/1:16,0:16:22.07:22,0,145	0/0:12,0:12:33.10:0,33,380	1/1:3,14:17:42.02:384,42,0	0/0:18,0:18:48.14:0,48,554	0/0:22,0:21:36.09:0,36,400	0/0:18,0:18:51.14:0,51,578	0/0:27,1:28:47.79:0,48,786	0/0:14,1:15:14.66:0,15,418	0/0:12,0:12:36.04:0,36,399	0/0:10,0:10:30.09:0,30,344	0/0:12,0:12:33.09:0,33,373	0/0:19,1:19:17.67:0,18,457	0/0:11,0:11:33.10:0,33,381	0/0:14,0:14:42.12:0,42,485	0/0:8,0:8:21.06:0,21,242	0/0:12,0:12:33.10:0,33,378	0/0:15,0:15:42.10:0,42,466	0/0:15,0:15:42.10:0,42,463	0/0:11,0:11:0.90:0,1,251	0/0:14,0:14:42.12:0,42,484	0/0:22,0:22:60.18:0,60,688	0/0:15,0:15:39.10:0,39,441	1/1:5,13:18:7.39:322,7,0	0/0:13,0:13:36.11:0,36,415	1/1:0,4:4:12.01:110,12,0
chr10	80257952	.	T	TG	8003.30	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=6.088;DP=591;FS=2.133;HRun=8;HaplotypeScore=79.7442;InbreedingCoeff=0.9313;MQ=74.17;MQ0=1;MQRankSum=-0.496;QD=18.97;ReadPosRankSum=2.048;VQSLOD=4.7960;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,16:23:56.91:614,57,0	0/1:9,0:9:6.63:106,0,7	0/0:24,1:24:21.81:0,22,288	0/0:13,0:11:20.32:0,20,153	1/1:30,0:30:79.93:526,80,0	1/1:2,14:16:36.11:415,36,0	0/0:14,0:14:34.56:0,35,301	1/1:18,0:18:41.06:256,41,0	0/0:15,0:15:42.02:0,42,384	1/1:31,0:31:81.55:477,82,0	1/1:20,0:20:53.28:349,53,0	0/0:21,0:21:54.03:0,54,494	1/1:3,20:22:51.15:589,51,0	1/1:4,18:22:42.12:482,42,0	1/1:19,0:19:47.38:312,47,0	0/0:18,0:18:51.03:0,51,467	1/1:27,0:27:31.88:357,32,0	1/1:18,0:18:41.42:276,41,0	1/1:20,0:20:52.86:324,53,0	1/1:31,0:31:85.97:592,86,0	1/1:12,0:12:23.65:151,24,0	0/0:22,0:22:47.99:0,48,435	0/0:22,0:22:63.01:0,63,571	0/0:19,0:19:54.03:0,54,494	1/1:24,0:24:65.06:425,65,0	1/1:10,25:35:53.69:829,54,0	1/1:38,0:38:99:717,107,0	1/1:0,6:6:18.05:208,18,0
chr10	80257960	.	G	GC	12012.94	PASS	AB=0.994;AC=33;AF=0.589;AN=56;BaseQRankSum=-6.730;DP=600;FS=1.923;HRun=0;HaplotypeScore=64.4602;InbreedingCoeff=0.6323;MQ=70.34;MQ0=2;MQRankSum=-0.613;QD=27.81;ReadPosRankSum=4.990;VQSLOD=5.6091;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:70.83:131,0,71	1/1:1,10:11:18.57:272,19,0	0/0:23,0:22:53.84:0,54,599	0/0:13,0:12:26.87:0,27,284	1/1:0,31:31:84.07:1189,84,0	0/1:18,0:18:38.79:77,0,39	0/0:17,0:17:51.06:0,51,603	1/1:1,19:20:57.10:728,57,0	0/0:14,0:14:42.14:0,42,580	1/1:0,30:30:90.28:1262,90,0	1/1:0,25:25:54.18:789,54,0	0/0:21,0:21:63.17:0,63,822	1/1:24,0:23:1.71:111,2,0	0/1:21,0:21:7.73:97,0,8	1/1:0,18:18:48.16:702,48,0	0/0:19,0:19:57.16:0,57,757	1/1:1,27:28:54.76:823,55,0	1/1:1,17:18:42.14:606,42,0	1/1:1,18:19:57.18:803,57,0	1/1:0,34:34:90.23:1283,90,0	1/1:2,11:13:24.08:351,24,0	0/0:18,0:18:54.12:0,54,692	0/0:22,0:22:66.18:0,66,887	0/0:20,0:20:60.17:0,60,800	1/1:0,22:22:66.22:964,66,0	0/1:31,1:32:40.61:209,0,41	1/1:0,37:37:99:1578,108,0	0/1:7,0:7:3.77:36,0,4
chr10	80260697	.	G	GCACACA	7380.04	PASS	AB=0.726;AC=39;AF=0.722;AN=54;BaseQRankSum=-3.607;DP=391;FS=3.725;HRun=0;HaplotypeScore=249.2231;InbreedingCoeff=0.5003;MQ=48.17;MQ0=0;MQRankSum=-0.428;QD=23.50;ReadPosRankSum=-1.077;VQSLOD=4.4199;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:14.87:0,15,107	1/1:0,5:9:6.02:150,6,0	1/1:9,0:7:20.23:172,20,0	0/0:4,0:3:5.85:0,6,43	1/1:11,12:23:2.99:24,3,0	0/1:8,0:20:39.22:138,0,39	0/0:11,0:12:1.01:0,1,147	1/1:18,1:19:56.40:568,56,0	0/0:16,0:16:20.92:0,21,228	1/1:11,10:22:62.18:1292,62,0	1/1:12,4:16:8.91:73,9,0	0/0:10,0:10:13.04:0,13,160	1/1:5,0:11:26.93:342,27,0	1/1:4,0:23:42.14:712,42,0	1/1:1,8:13:12.04:393,12,0	0/1:12,0:12:41.84:42,0,158	1/1:7,2:10:8.89:196,9,0	1/1:7,1:8:16.55:177,17,0	1/1:5,4:10:29.98:548,30,0	1/1:5,5:11:3.01:99,3,0	1/1:2,3:5:3.01:99,3,0	0/0:17,0:17:18.04:0,18,204	1/1:18,0:18:8.97:70,9,0	./.	1/1:6,8:16:30.07:866,30,0	0/1:4,1:21:29.28:448,0,29	1/1:13,11:25:38.37:923,38,0	1/1:2,0:10:4.21:48,4,0
chr10	80260737	.	AGC	A	216.84	PASS	AB=0.991;AC=25;AF=0.463;AN=54;BaseQRankSum=-2.221;DP=454;FS=11.921;HRun=0;HaplotypeScore=223.5070;InbreedingCoeff=-0.0251;MQ=52.34;MQ0=17;MQRankSum=-0.997;QD=0.66;ReadPosRankSum=-4.324;VQSLOD=0.3975;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:14.08:14,0,16	1/1:7,0:7:3.85:23,4,0	0/1:21,0:11:2.91:3,0,54	0/1:30,0:9:3.33:3,0,10	1/1:28,2:26:2.98:25,3,0	0/1:19,0:19:0.23:0,0,124	0/0:15,0:15:11.44:0,11,221	0/0:23,0:23:5.78:0,6,246	0/1:15,0:15:14.32:14,0,52	0/0:22,0:21:22.05:0,22,206	1/1:18,0:17:10.54:64,11,0	0/1:11,1:11:8.25:8,0,67	0/1:12,0:12:13.16:13,0,92	0/1:23,0:23:3.83:4,0,167	1/1:14,0:14:8.85:55,9,0	0/1:12,0:12:19.76:20,0,181	0/0:7,0:7:7.50:0,8,34	0/1:9,0:8:2.92:33,0,3	0/1:11,0:11:7.32:7,0,61	1/1:13,0:13:2.99:24,3,0	./.	0/0:17,0:17:5.50:0,6,67	0/0:16,1:16:8.83:0,9,121	0/0:11,0:11:0.03:0,0,190	1/1:21,0:21:2.51:18,3,0	0/1:19,0:19:26:26,0,201	0/1:22,1:21:13.54:14,0,117	0/0:6,0:6:8.55:0,9,78
chr10	80260739	.	CGAGA	C	1034.67	PASS	AB=0.932;AC=25;AF=0.463;AN=54;BaseQRankSum=1.124;DP=453;FS=11.839;HRun=0;HaplotypeScore=219.7679;InbreedingCoeff=0.3624;MQ=52.76;MQ0=18;MQRankSum=-3.358;QD=4.03;ReadPosRankSum=1.214;VQSLOD=1.1710;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:22:1.89:14,2,0	1/1:5,1:6:6.02:93,6,0	0/0:21,0:11:2.94:0,3,18	0/0:31,0:9:0.47:0,0,2	1/1:26,2:26:2.12:7,2,0	0/0:17,2:19:8.24:0,8,133	0/0:14,0:15:20.74:0,21,391	0/1:22,0:22:32.53:33,0,39	0/0:15,1:17:7.72:0,8,101	1/1:18,1:19:8.76:97,9,0	1/1:16,2:17:12.19:169,12,0	0/0:10,0:11:5.98:0,6,83	0/0:12,0:12:11.52:0,12,130	0/1:22,0:22:22.71:23,0,139	1/1:9,2:13:7.84:93,8,0	0/0:10,0:13:13.59:0,14,232	1/1:5,1:7:5.75:85,6,0	1/1:5,2:7:9.02:114,9,0	1/1:9,2:11:11.84:131,12,0	1/1:10,2:13:6:71,6,0	./.	0/0:14,0:16:5.95:0,6,90	0/0:16,0:15:12.03:0,12,230	0/0:9,0:11:17.53:0,18,311	0/1:17,4:23:26.17:42,0,26	0/1:19,0:20:13:87,0,13	0/1:20,1:20:14.72:151,0,15	0/0:6,0:6:4.02:0,4,23
chr10	80261471	.	C	CT	6839.81	PASS	AB=0.545;AC=25;AF=0.446;AN=56;BaseQRankSum=-13.817;DP=527;FS=4.225;HRun=9;HaplotypeScore=51.3497;InbreedingCoeff=0.9511;MQ=78.17;MQ0=0;MQRankSum=-2.133;QD=24.69;ReadPosRankSum=1.878;VQSLOD=5.7403;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:38.98:0,39,338	1/1:3,15:18:45.12:498,45,0	0/0:15,0:16:18.44:0,18,202	0/0:18,0:16:31.64:0,32,244	1/1:7,20:27:34.15:604,34,0	0/0:11,0:11:29.99:0,30,260	0/0:17,0:17:44.96:0,45,386	1/1:12,17:29:26.60:490,27,0	0/0:18,0:18:50.97:0,51,439	1/1:3,9:12:30.08:330,30,0	1/1:4,27:32:84.02:897,84,0	0/0:18,1:19:20.81:0,21,410	0/0:21,0:21:56.99:0,57,495	0/0:18,0:18:44.96:0,45,391	1/1:2,18:20:48.13:531,48,0	0/0:12,0:12:20.98:0,21,182	1/1:1,15:16:45.12:498,45,0	0/1:2,10:12:1.99:208,0,2	1/1:5,12:17:15.95:388,16,0	1/1:4,29:33:81.14:869,81,0	1/1:2,10:12:27.07:299,27,0	0/0:15,0:15:38.98:0,39,338	0/0:23,0:23:47.92:0,48,409	0/0:9,0:9:23.99:0,24,208	1/1:3,21:24:57.15:631,57,0	0/0:22,0:22:56.99:0,57,495	1/1:4,21:25:54.15:597,54,0	0/0:14,0:14:41.99:0,42,365
chr10	80262072	.	C	CACAA	30188.88	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-12.896;DP=587;FS=0.000;HRun=0;HaplotypeScore=74.2991;InbreedingCoeff=0.9959;MQ=78.64;MQ0=1;MQRankSum=-5.467;QD=66.64;ReadPosRankSum=1.370;VQSLOD=6.9725;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:63.22:1698,63,0	1/1:0,7:7:21.07:566,21,0	0/0:15,0:15:42.10:0,42,701	0/0:15,0:15:39.03:0,39,627	1/1:4,29:35:87.17:2163,87,0	1/1:1,26:28:75.26:2005,75,0	0/0:14,0:14:39.12:0,39,684	1/1:5,18:28:81.20:1799,81,0	0/0:16,0:16:48.15:0,48,879	1/1:1,25:27:78.26:2048,78,0	1/1:2,26:28:81.05:1877,81,0	0/0:16,0:16:45.15:0,45,853	1/1:3,22:27:59.99:1533,60,0	1/1:1,18:20:51.13:1314,51,0	1/1:1,29:30:84.29:2265,84,0	0/0:10,0:10:27.09:0,27,512	1/1:1,17:19:45.15:1214,45,0	1/1:0,5:5:15.05:404,15,0	1/1:5,16:22:60.20:1509,60,0	1/1:1,24:26:75.15:1840,75,0	1/1:3,9:12:30.10:802,30,0	0/0:11,0:11:30.07:0,30,504	0/0:13,0:13:33.11:0,33,626	0/0:24,0:24:69.20:0,69,1242	1/1:3,32:38:99:2425,99,0	1/1:1,32:32:99:2419,99,0	1/1:3,25:30:69.15:1740,69,0	1/1:0,8:12:21.07:567,21,0
chr10	80262535	.	G	GCACACA	3939.06	PASS	AB=0.896;AC=31;AF=0.574;AN=54;BaseQRankSum=8.733;DP=541;FS=1.648;HRun=0;HaplotypeScore=148.6946;InbreedingCoeff=0.6719;MQ=56.58;MQ0=12;MQRankSum=-6.865;QD=11.52;ReadPosRankSum=-1.565;VQSLOD=2.6830;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,17:39:10.29:182,10,0	1/1:6,0:7:15.98:126,16,0	0/0:33,0:16:1.55:0,2,4	./.	1/1:17,0:22:1.81:365,2,0	1/1:2,0:12:14.92:199,15,0	0/0:14,0:18:29.84:0,30,525	1/1:32,0:31:35.70:192,36,0	0/0:15,0:15:36.08:0,36,637	1/1:11,0:13:14.27:159,14,0	1/1:15,0:17:28.72:336,29,0	0/0:9,0:9:9.29:0,9,362	1/1:2,1:12:9.03:235,9,0	1/1:4,4:24:6.02:196,6,0	1/1:20,0:21:41.27:330,41,0	0/0:12,0:14:19.33:0,19,482	0/1:21,0:23:8.62:208,0,9	1/1:18,0:20:32.67:291,33,0	0/1:24,0:23:22.88:155,0,23	1/1:13,0:13:5.93:84,6,0	0/1:12,0:14:8.33:42,0,8	0/0:13,0:12:20.80:0,21,335	0/0:13,0:13:33.11:0,33,659	0/0:34,0:35:42.14:0,42,1173	1/1:21,0:26:40.75:497,41,0	0/0:16,0:15:33.11:0,33,596	1/1:15,0:17:37.16:342,37,0	0/0:8,0:7:15.05:0,15,310
chr10	80262570	.	CA	C	1887.14	PASS	AB=0.825;AC=14;AF=0.250;AN=56;BaseQRankSum=12.652;DP=630;FS=1.341;HRun=2;HaplotypeScore=136.1703;InbreedingCoeff=0.1940;MQ=57.76;MQ0=15;MQRankSum=-9.771;QD=8.42;ReadPosRankSum=-0.432;VQSLOD=0.9245;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:31.87:0,32,837	0/1:8,1:9:0.08:65,0,0	0/0:63,0:25:67.14:0,67,798	0/0:68,0:31:92.55:0,93,1173	0/1:15,5:20:99:165,0,113	0/0:17,0:16:32.37:0,32,466	0/0:22,0:21:51.17:0,51,735	0/0:31,0:30:12.46:0,12,340	0/0:16,0:16:42.10:0,42,585	0/1:14,2:14:45.07:45,0,82	1/1:8,7:13:18.95:200,19,0	0/0:15,0:15:45.15:0,45,645	0/0:11,0:11:18.02:0,18,231	0/0:25,0:25:27.09:0,27,394	1/1:19,10:29:21.48:414,21,0	0/0:14,0:14:40.69:0,41,583	0/1:22,2:24:87.11:87,0,116	0/1:10,9:18:7.08:173,0,7	0/1:12,3:14:68.88:118,0,69	0/1:9,3:12:16.14:102,0,16	0/1:24,1:22:35.93:36,0,37	0/0:7,0:7:21.07:0,21,305	0/0:14,0:14:42.13:0,42,594	0/0:35,1:36:78.17:0,78,1264	0/1:17,8:25:40.68:394,0,41	0/0:19,0:18:54.08:0,54,730	0/1:8,6:14:0.20:254,0,0	0/0:8,0:7:18.06:0,18,265
chr10	80262571	.	AACACAC	A	6082.22	PASS	AB=0.825;AC=23;AF=0.411;AN=56;BaseQRankSum=11.093;DP=623;FS=3.701;HRun=0;HaplotypeScore=162.1535;InbreedingCoeff=0.7498;MQ=58.16;MQ0=15;MQRankSum=-10.494;QD=24.62;ReadPosRankSum=1.009;VQSLOD=4.6820;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:38:66.70:0,67,1974	0/1:7,2:9:37.14:226,0,37	0/0:64,0:26:68.13:0,68,1528	0/0:69,0:32:92.98:0,93,2192	1/1:13,6:20:19.86:296,20,0	0/0:17,0:16:36.12:0,36,1122	0/0:22,0:21:42.14:0,42,1351	1/1:9,16:24:45.08:729,45,0	0/0:15,0:15:38.98:0,39,1079	1/1:6,10:15:33.02:645,33,0	1/1:14,1:13:8.72:155,9,0	0/0:15,0:15:42.14:0,42,1284	0/0:11,0:11:18.06:0,18,552	0/0:24,0:24:27.09:0,27,884	1/1:15,14:29:63.17:1151,63,0	0/0:15,0:15:45.15:0,45,1393	1/1:13,8:23:4.40:193,4,0	0/1:16,1:18:12.74:339,0,13	1/1:7,8:14:32.69:645,33,0	1/1:6,6:12:20.74:410,21,0	0/1:13,10:21:13.55:125,0,14	0/0:7,0:7:18.06:0,18,605	0/0:16,0:16:48.16:0,48,1313	0/0:35,0:35:87.30:0,87,2818	1/1:16,6:25:47.96:776,48,0	0/0:20,0:19:48.16:0,48,1423	1/1:11,2:14:23.95:391,24,0	0/0:8,0:7:15.05:0,15,509
chr10	80262576	.	AC	A	2125.84	PASS	AB=0.833;AC=15;AF=0.268;AN=56;BaseQRankSum=13.533;DP=613;FS=7.275;HRun=1;HaplotypeScore=127.0010;InbreedingCoeff=0.0706;MQ=61.14;MQ0=14;MQRankSum=-10.681;QD=9.75;ReadPosRankSum=1.193;VQSLOD=1.2116;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:75.56:0,76,1146	0/1:8,1:9:47.34:49,0,47	0/0:68,0:30:88.85:0,89,1156	0/0:74,0:36:99:0,99,1300	0/1:13,6:19:44.27:160,0,44	0/0:18,0:17:39.13:0,39,613	0/0:23,0:22:53.89:0,54,833	0/1:19,0:19:99:201,0,132	0/0:14,0:14:39.13:0,39,585	0/1:14,2:14:48.83:145,0,49	1/1:5,6:9:5.79:103,6,0	0/0:16,0:16:48.16:0,48,738	0/0:12,0:12:21.07:0,21,324	0/0:24,0:24:30.10:0,30,469	1/1:18,10:28:58.44:502,58,0	0/0:15,0:15:45.15:0,45,707	0/1:19,1:20:38.71:39,0,88	0/1:10,5:14:54.65:111,0,55	0/1:11,3:13:3.32:225,0,3	0/1:8,3:11:10.49:109,0,10	0/1:22,0:20:11.67:12,0,69	0/0:8,0:8:24.07:0,24,351	0/0:17,0:17:51.17:0,51,786	0/0:33,0:33:87.07:0,87,1357	0/1:10,11:21:3.10:380,0,3	0/0:20,0:19:57.19:0,57,867	0/1:6,7:13:17.59:257,0,18	0/0:13,0:12:33.09:0,33,451
chr10	80264408	.	G	GTCTCTCTCTC	6037.91	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=3.559;DP=644;FS=0.000;HRun=0;HaplotypeScore=199.0927;InbreedingCoeff=0.6830;MQ=62.54;MQ0=20;MQRankSum=-5.847;QD=12.53;ReadPosRankSum=-0.379;VQSLOD=3.2116;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:11.96:206,12,0	1/1:8,0:8:5.90:121,6,0	0/1:35,0:20:0:0,0,0	0/0:55,0:16:3.32:0,3,29	1/1:27,0:26:12.01:202,12,0	1/1:34,0:33:38.91:481,39,0	0/0:15,0:16:30.03:0,30,686	1/1:38,0:38:9.94:111,10,0	0/0:22,0:24:43.14:0,43,1231	1/1:35,0:35:68.97:1260,69,0	0/1:18,0:18:0.03:0,0,0	0/0:14,0:14:26.73:0,27,599	1/1:25,0:25:18.02:399,18,0	1/1:16,0:26:12.04:446,12,0	1/1:15,17:33:6.02:279,6,0	0/0:12,0:12:3.09:0,3,591	1/1:14,0:13:12.01:203,12,0	1/1:3,0:3:8.98:137,9,0	1/1:24,0:21:20.88:342,21,0	1/1:20,0:20:15.48:227,15,0	1/1:13,0:11:6.01:108,6,0	0/1:17,0:17:37.83:38,0,432	0/0:19,0:19:3.25:0,3,390	0/0:19,0:22:32.89:0,33,724	1/1:36,0:35:27.01:312,27,0	1/1:23,0:22:26.97:493,27,0	1/1:23,0:23:29.61:367,30,0	1/1:14,0:13:19.78:305,20,0
chr10	80265769	.	GAAAAAAAAAAAGA	G	2924.58	PASS	AB=0.909;AC=20;AF=0.370;AN=54;BaseQRankSum=5.863;DP=390;FS=6.807;HRun=0;HaplotypeScore=127.8054;InbreedingCoeff=0.0705;MQ=48.29;MQ0=26;MQRankSum=-5.089;QD=12.88;ReadPosRankSum=5.211;VQSLOD=1.6681;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:13:9.03:247,9,0	1/1:6,0:5:6.02:136,6,0	./.	0/0:15,0:2:6.02:0,6,130	0/0:19,0:21:12.31:0,12,92	0/1:13,5:18:65.79:667,0,66	0/0:8,0:9:15.02:0,15,591	0/0:27,0:24:14.52:0,15,112	0/0:16,0:15:27.09:0,27,1355	0/0:12,0:12:7.33:0,7,33	0/1:20,0:21:80.48:100,0,80	0/0:10,0:10:12.04:0,12,568	1/1:1,3:4:3.01:104,3,0	1/1:7,0:8:6:73,6,0	0/1:9,0:10:54.85:74,0,55	0/0:12,0:12:30.08:0,30,1104	0/1:17,0:18:47.74:48,0,117	0/1:7,1:7:13.74:46,0,14	0/1:19,0:16:22.93:23,0,58	0/1:17,0:16:8.66:188,0,9	0/0:8,0:8:9.85:0,10,79	0/0:2,0:2:3:0,3,26	0/0:11,0:11:10.28:0,10,538	0/0:8,0:8:14.07:0,14,632	0/1:25,0:26:57.52:460,0,58	0/1:10,9:19:14.02:455,0,14	0/1:21,0:19:51.65:56,0,52	1/1:9,7:15:11.75:417,12,0
chr10	80265782	.	AAAAAAAAAAAAG	A	4226.56	PASS	AB=0.840;AC=29;AF=0.537;AN=54;BaseQRankSum=7.902;DP=378;FS=0.602;HRun=0;HaplotypeScore=116.0511;InbreedingCoeff=0.2816;MQ=48.96;MQ0=20;MQRankSum=1.763;QD=14.83;ReadPosRankSum=4.543;VQSLOD=3.2008;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:12:7.48:221,7,0	1/1:1,4:4:6.02:197,6,0	./.	0/0:21,0:5:11.91:0,12,168	0/1:7,16:23:15.09:162,0,15	0/1:17,0:17:99:468,0,109	0/0:8,0:8:18.06:0,18,707	1/1:13,12:23:14.69:300,15,0	0/0:13,0:12:27.09:0,27,1260	1/1:11,0:11:14.80:99,15,0	1/1:11,12:23:5.89:236,6,0	0/0:12,0:12:21.05:0,21,817	0/1:4,0:4:17.16:75,0,17	0/1:7,0:7:9.39:9,0,71	0/1:5,5:10:1.96:119,0,2	0/0:12,0:12:30.10:0,30,1089	0/1:9,10:19:23.03:106,0,23	1/1:8,0:8:9.23:74,9,0	1/1:6,12:17:20:303,20,0	1/1:3,9:11:26.49:439,26,0	0/1:9,0:9:15.32:17,0,15	0/0:3,0:2:0:0,0,0	0/0:9,0:9:16.30:0,16,710	0/0:9,0:9:12.51:0,13,593	1/1:8,20:28:11.02:676,11,0	0/1:18,0:18:16.62:283,0,17	0/1:10,12:20:7.06:119,0,7	1/1:13,0:11:11.77:324,12,0
chr10	80265794	.	G	GA	1197.78	PASS	AB=0.980;AC=17;AF=0.315;AN=54;BaseQRankSum=1.167;DP=355;FS=13.480;HRun=12;HaplotypeScore=64.5362;InbreedingCoeff=0.4121;MQ=54.21;MQ0=13;MQRankSum=5.409;QD=7.05;ReadPosRankSum=-5.685;VQSLOD=-0.6718;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:17:1.07:0,1,93	0/0:5,0:4:3.63:0,4,9	0/0:10,0:2:1.72:0,2,10	0/0:24,0:9:7.45:0,7,61	1/1:20,0:20:1.47:155,1,0	0/0:17,0:17:32.42:0,32,191	0/0:7,0:7:6.75:0,7,102	1/1:21,0:20:15.72:306,16,0	0/0:11,0:11:29.08:0,29,205	1/1:3,10:13:25.06:209,25,0	0/1:18,1:19:1.10:139,0,1	0/0:7,0:8:18.79:0,19,125	0/0:4,0:4:5.48:0,5,32	0/0:8,0:8:16.89:0,17,110	1/1:10,0:10:0.99:16,1,0	0/0:11,0:12:29.38:0,29,183	0/0:16,0:16:0.09:0,0,3	0/1:8,0:8:8.04:85,0,8	1/1:16,0:17:30.77:270,31,0	1/1:11,0:10:7.61:115,8,0	0/1:7,0:7:12.88:38,0,13	./.	0/0:8,0:8:17.88:0,18,138	0/0:10,0:10:11.79:0,12,90	0/1:25,0:25:5.86:6,0,11	0/0:15,0:15:19.16:0,19,109	0/1:18,1:17:12.26:22,0,12	0/0:11,0:10:15.95:0,16,82
chr10	80268666	.	CT	C	8172.83	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=12.735;DP=414;FS=9.077;HRun=1;HaplotypeScore=38.8115;InbreedingCoeff=0.9715;MQ=78.95;MQ0=0;MQRankSum=-1.694;QD=39.87;ReadPosRankSum=1.651;VQSLOD=4.6460;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.16:0,54,832	1/1:0,4:4:9.03:126,9,0	0/0:13,0:13:39.13:0,39,619	0/0:8,0:8:21.07:0,21,336	1/1:0,23:23:69.23:965,69,0	0/0:16,0:16:48.16:0,48,765	0/0:11,0:11:33.11:0,33,528	1/1:0,26:26:78.25:1073,78,0	0/0:13,0:13:39.13:0,39,624	1/1:0,12:12:36.12:500,36,0	1/1:0,21:21:63.21:872,63,0	0/0:10,0:10:27.09:0,27,432	0/0:13,0:13:39.12:0,39,597	0/0:15,0:15:45.15:0,45,720	1/1:0,15:15:42.14:587,42,0	0/0:13,0:13:39.12:0,39,601	1/1:0,16:16:42.14:582,42,0	1/1:0,17:17:45.15:629,45,0	1/1:0,9:9:27.09:378,27,0	1/1:0,20:20:57.19:790,57,0	1/1:0,13:13:36.12:504,36,0	0/0:11,0:11:33.11:0,33,523	0/0:15,0:15:45.15:0,45,719	0/0:11,0:11:33.09:0,33,503	1/1:0,12:12:36.12:496,36,0	0/0:27,2:29:4.30:0,4,1188	1/1:0,17:17:48.16:671,48,0	0/0:13,0:13:39.13:0,39,623
chr10	80278306	.	A	AT	534.15	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.353;DP=556;FS=0.841;HRun=8;HaplotypeScore=53.8991;InbreedingCoeff=0.8791;MQ=54.58;MQ0=6;MQRankSum=0.752;QD=19.78;ReadPosRankSum=-1.014;VQSLOD=2.9878;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:33.44:629,33,0	0/0:7,0:7:15.01:0,15,137	0/0:23,0:7:11.11:0,11,119	0/0:10,0:6:7.93:0,8,83	0/0:26,0:26:72.04:0,72,658	0/0:22,0:22:60.01:0,60,544	0/0:14,0:14:29.99:0,30,269	0/0:30,0:30:78.02:0,78,710	0/0:13,0:13:33.01:0,33,302	0/0:27,0:27:66.03:0,66,603	0/0:29,0:29:75.01:0,75,680	0/0:16,0:16:39.01:0,39,353	0/0:21,0:21:51.03:0,51,467	0/0:12,0:12:29.99:0,30,268	0/0:17,0:16:44.99:0,45,402	0/0:12,0:12:35.97:0,36,314	0/0:26,0:26:65.99:0,66,595	0/0:20,0:20:59.99:0,60,541	0/0:21,0:15:45.02:0,45,410	0/0:27,0:27:78.04:0,78,713	0/0:10,0:10:20.98:0,21,188	0/0:21,0:21:63.03:0,63,577	0/0:26,0:26:68.97:0,69,616	0/0:14,0:13:42.02:0,42,384	0/0:20,0:20:51.01:0,51,463	0/0:25,0:25:63.02:0,63,573	0/0:30,0:30:63:0,63,577	0/0:6,0:7:20.05:0,20,171
chr10	80278589	.	AT	A	484.94	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.349;DP=610;FS=0.862;HRun=6;HaplotypeScore=52.2861;InbreedingCoeff=0.8065;MQ=56.66;MQ0=17;MQRankSum=-1.950;QD=17.32;ReadPosRankSum=0.651;VQSLOD=3.1014;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:27:54.13:580,54,0	0/0:8,0:8:24.08:0,24,316	0/0:23,1:10:1.28:0,1,290	0/0:16,0:6:18.05:0,18,209	0/0:35,0:35:99:0,105,1367	0/0:18,0:18:54.18:0,54,711	0/0:11,0:11:27.05:0,27,324	0/0:29,0:21:54.17:0,54,696	0/0:17,1:17:33.09:0,33,418	0/0:25,0:25:75.23:0,75,972	0/0:26,0:26:75.23:0,75,973	0/0:17,0:17:26.52:0,27,534	0/0:27,0:27:72.23:0,72,930	0/0:17,1:18:45.15:0,45,592	0/0:19,0:19:54.16:0,54,696	0/0:23,0:23:63.20:0,63,829	0/0:21,0:20:51.11:0,51,638	0/0:16,0:16:42.12:0,42,537	0/0:18,0:11:30.10:0,30,395	0/0:35,0:35:99:0,102,1287	0/0:22,0:22:63.20:0,63,829	0/0:28,0:28:81.23:0,81,1047	0/0:26,0:26:69.21:0,69,893	0/0:15,0:15:45.15:0,45,592	0/0:19,0:19:54.18:0,54,710	0/0:26,0:26:75.24:0,75,987	0/0:30,0:30:81.26:0,81,1062	0/0:12,0:12:27.09:0,27,351
chr10	80279174	.	TC	T	492.05	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=4.122;DP=677;FS=7.107;HRun=1;HaplotypeScore=77.5318;InbreedingCoeff=0.9947;MQ=44.46;MQ0=38;MQRankSum=-1.304;QD=22.37;ReadPosRankSum=1.890;VQSLOD=3.4360;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:20:42.14:586,42,0	0/0:20,0:17:51.16:0,51,788	./.	./.	0/0:32,0:32:78.16:0,78,1231	0/0:27,0:26:66.23:0,66,1051	0/0:13,0:10:30.10:0,30,475	0/0:37,0:34:99:0,99,1544	0/0:18,0:18:27.04:0,27,380	0/0:24,0:21:63.19:0,63,978	0/0:29,0:26:63.21:0,63,1004	0/0:14,0:14:39.12:0,39,598	0/0:30,0:30:69.20:0,69,1046	0/0:24,0:23:45.13:0,45,671	0/0:19,0:19:39.07:0,39,598	0/0:21,0:21:57.08:0,57,830	0/0:32,0:25:51.17:0,51,804	0/0:28,0:23:48.12:0,48,735	0/0:37,0:31:93.32:0,93,1484	0/0:42,0:37:96.33:0,96,1530	0/0:20,0:15:26.97:0,27,430	0/0:28,0:27:66.23:0,66,1049	0/0:27,0:24:57.17:0,57,873	0/0:19,0:13:24.08:0,24,383	0/0:30,0:29:75.23:0,75,1160	0/0:29,1:30:47.68:0,48,1266	0/0:39,0:38:99:0,111,1740	0/0:15,0:10:30.10:0,30,479
chr10	80280738	.	CT	C	4542.42	PASS	AB=0.906;AC=29;AF=0.518;AN=56;BaseQRankSum=4.112;DP=473;FS=0.387;HRun=11;HaplotypeScore=59.4468;InbreedingCoeff=0.7834;MQ=77.47;MQ0=0;MQRankSum=1.888;QD=15.94;ReadPosRankSum=0.556;VQSLOD=5.3437;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:31:55.01:0,55,351	1/1:2,11:13:32.95:271,33,0	0/0:12,0:11:1.63:0,2,115	0/1:18,1:18:26.46:26,0,64	1/1:5,26:31:62.82:512,63,0	0/0:11,0:11:21.02:0,21,212	0/1:11,2:13:13.24:13,0,271	1/1:6,28:34:71.72:573,72,0	0/0:23,1:24:41.56:0,42,646	1/1:2,13:15:38.93:319,39,0	1/1:2,19:21:53.88:437,54,0	0/0:13,0:13:39.08:0,39,407	0/1:8,1:9:0.59:1,0,199	0/0:14,0:14:33.08:0,33,348	1/1:4,8:12:20.95:172,21,0	0/0:12,0:12:33.08:0,33,352	1/1:3,14:19:43.01:332,43,0	1/1:2,5:7:14.98:123,15,0	1/1:2,9:11:26.95:219,27,0	1/1:5,18:23:50.93:418,51,0	1/1:1,12:15:40.03:307,40,0	0/0:8,0:8:15.04:0,15,160	0/0:16,0:16:39.09:0,39,410	0/0:10,0:10:27.03:0,27,276	1/1:2,16:18:38.95:320,39,0	0/0:24,2:27:12.93:0,13,555	1/1:1,23:25:61.90:498,62,0	0/0:10,0:9:24.04:0,24,245
chr10	80281798	.	CCTCCTCCTCCTT	C	649.73	PASS	AB=0.968;AC=6;AF=0.107;AN=56;BaseQRankSum=4.377;DP=367;FS=2.195;HRun=0;HaplotypeScore=74.4394;InbreedingCoeff=0.0823;MQ=36.89;MQ0=84;MQRankSum=-3.659;QD=10.31;ReadPosRankSum=-0.556;VQSLOD=1.3589;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,4:16:99:502,0,277	0/0:5,0:5:3:0,3,27	0/0:47,0:4:11.94:0,12,104	0/0:52,0:11:6.83:0,7,190	0/0:9,0:8:18.04:0,18,437	0/0:17,0:15:41.89:0,42,936	0/0:16,0:12:23.72:0,24,208	0/0:14,0:9:15.48:0,15,262	0/0:9,0:7:10.67:0,11,72	0/0:7,0:7:21.02:0,21,397	0/0:5,0:5:15.02:0,15,303	0/0:7,0:3:3.47:0,3,27	0/1:4,0:3:49.84:50,0,72	0/0:12,0:4:6.01:0,6,57	0/0:9,0:2:0.27:0,0,23	0/0:7,0:7:15.92:0,16,392	0/1:9,0:6:56.69:57,0,268	1/1:9,0:5:8.89:127,9,0	0/0:4,0:3:6:0,6,112	0/0:6,0:4:9.01:0,9,189	0/0:15,0:8:12.01:0,12,185	0/0:11,0:10:21.07:0,21,630	0/0:11,0:10:27.06:0,27,739	0/1:13,0:11:36.51:37,0,222	0/0:8,0:6:18.02:0,18,529	0/0:17,0:11:26.97:0,27,693	0/0:5,0:3:9.02:0,9,180	0/0:10,0:4:12.02:0,12,321
chr10	80284202	.	GA	G	10230.13	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=9.677;DP=525;FS=3.599;HRun=8;HaplotypeScore=51.8781;InbreedingCoeff=0.9656;MQ=78.07;MQ0=0;MQRankSum=-3.497;QD=25.20;ReadPosRankSum=2.051;VQSLOD=5.7082;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:45.07:435,45,0	1/1:1,11:12:27.04:261,27,0	0/0:11,0:11:24.06:0,24,272	0/0:12,0:12:5.15:0,5,220	1/1:2,35:37:96.15:927,96,0	1/1:1,20:21:60.10:579,60,0	0/0:8,0:8:24.04:0,24,267	1/1:1,20:21:60.08:574,60,0	0/0:12,1:13:7.13:0,7,370	1/1:5,25:30:69.09:662,69,0	1/1:0,18:18:54.09:520,54,0	0/0:16,0:16:42.11:0,42,495	1/1:2,19:21:51.08:493,51,0	1/1:1,11:12:30.05:290,30,0	1/1:2,23:25:63.10:608,63,0	0/0:9,0:9:27.07:0,27,315	1/1:3,21:24:60.09:579,60,0	1/1:2,12:14:36.05:347,36,0	1/1:1,22:23:66.09:631,66,0	1/1:2,31:33:87.14:840,87,0	1/1:1,10:11:30.05:290,30,0	0/0:20,0:20:57.17:0,57,689	0/0:22,0:22:57.17:0,57,688	0/0:8,0:8:24.07:0,24,290	1/1:3,21:24:63.09:608,63,0	1/1:2,21:23:63.10:608,63,0	1/1:3,25:28:35.88:630,36,0	1/1:0,13:13:36.06:348,36,0
chr10	80285719	.	GA	G	509.42	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.934;DP=540;FS=3.858;HRun=9;HaplotypeScore=59.7834;InbreedingCoeff=0.7890;MQ=80.96;MQ0=0;MQRankSum=-1.980;QD=19.59;ReadPosRankSum=0.339;VQSLOD=4.1220;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:66.04:604,66,0	0/0:11,0:11:24.95:0,25,271	0/0:17,1:18:2.62:0,3,279	0/0:15,0:16:9.43:0,9,300	0/0:35,0:35:96.27:0,96,1091	0/0:28,0:27:81.23:0,81,927	0/0:11,0:11:30.09:0,30,346	0/0:25,1:26:41.74:0,42,734	0/0:15,0:16:41.96:0,42,462	0/0:30,0:32:81.07:0,81,915	0/0:26,0:26:72.17:0,72,795	0/0:24,0:24:60.17:0,60,682	0/0:17,0:17:39.12:0,39,450	0/0:7,0:7:18.05:0,18,208	0/0:16,0:16:45.12:0,45,511	0/0:16,0:16:45.13:0,45,519	0/0:14,1:15:17.65:0,18,446	0/0:1,0:14:31.25:0,31,159	0/0:18,0:18:48.09:0,48,531	0/0:30,0:30:78.22:0,78,891	0/0:11,0:11:30.09:0,30,346	0/0:17,0:17:42.11:0,42,472	0/0:20,0:20:51.14:0,51,579	0/0:18,0:18:48.14:0,48,553	0/0:17,0:17:51.15:0,51,589	0/0:9,0:23:42.19:0,42,241	0/0:20,0:20:54.16:0,54,620	0/0:4,0:11:19.92:0,20,102
chr10	80285826	.	CT	C	577.01	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.596;DP=526;FS=0.770;HRun=8;HaplotypeScore=53.4252;InbreedingCoeff=0.9244;MQ=72.40;MQ0=0;MQRankSum=-0.958;QD=16.97;ReadPosRankSum=0.259;VQSLOD=3.3729;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.18:0,63,749	0/0:5,0:5:12.04:0,12,144	0/0:23,0:18:28.05:0,28,231	0/0:14,0:11:14.98:0,15,145	0/0:28,0:28:78.21:0,78,918	0/0:23,0:23:60.17:0,60,709	0/0:15,0:15:42.10:0,42,474	0/0:26,0:26:69.20:0,69,823	0/0:16,0:16:45.13:0,45,531	0/0:30,0:30:84.26:0,84,1007	0/0:22,0:22:54.06:0,54,605	0/0:15,0:15:45.14:0,45,543	0/0:11,0:11:33.09:0,33,386	0/0:15,0:15:42.13:0,42,507	0/0:20,0:19:57.17:0,57,686	0/0:17,0:17:48.15:0,48,579	0/0:16,0:16:48.15:0,48,579	0/0:14,0:14:36.11:0,36,434	0/0:16,0:16:42.13:0,42,507	0/0:31,0:31:90.18:0,90,1029	0/0:3,0:3:6.02:0,6,72	0/0:19,0:19:54.11:0,54,635	0/0:17,0:17:48.15:0,48,579	0/0:12,0:12:30.08:0,30,351	0/0:35,0:35:93.28:0,93,1116	1/1:4,17:21:27.70:466,28,0	0/0:28,0:28:72.20:0,72,855	1/1:1,12:13:23.83:231,24,0
chr10	80288286	.	AGATG	A	8169.26	PASS	AB=0.762;AC=41;AF=0.788;AN=52;BaseQRankSum=6.992;DP=603;FS=4.033;HRun=0;HaplotypeScore=100.0937;InbreedingCoeff=0.8427;MQ=56.69;MQ0=24;MQRankSum=0.318;QD=18.32;ReadPosRankSum=0.993;VQSLOD=4.4513;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:23:15.05:0,15,244	1/1:5,11:15:24.08:371,24,0	./.	./.	1/1:18,6:24:36.11:537,36,0	0/0:20,0:20:33.11:0,33,751	0/0:13,0:13:15.05:0,15,351	1/1:33,0:25:5.95:42,6,0	0/0:22,0:22:33.08:0,33,636	1/1:21,4:25:24.07:333,24,0	1/1:5,6:11:18.06:278,18,0	1/1:10,12:22:21.07:325,21,0	1/1:13,4:17:21.07:317,21,0	1/1:7,15:21:30.10:464,30,0	1/1:10,21:31:42.14:649,42,0	0/0:18,0:18:33.10:0,33,728	1/1:10,15:24:15.05:232,15,0	0/1:11,5:16:27.83:127,0,28	1/1:8,6:14:18.06:277,18,0	1/1:9,14:23:54.13:807,54,0	1/1:16,14:27:27.09:418,27,0	1/1:10,6:16:27.09:415,27,0	1/1:12,17:28:30.10:464,30,0	1/1:8,13:21:30.10:464,30,0	1/1:8,10:18:27.09:417,27,0	1/1:13,12:24:36.12:554,36,0	1/1:5,9:14:30.09:444,30,0	1/1:7,7:13:15.05:232,15,0
chr10	80288570	.	C	CTGTGTG	3721.46	PASS	AB=0.940;AC=33;AF=0.635;AN=52;BaseQRankSum=-0.735;DP=524;FS=0.000;HRun=0;HaplotypeScore=136.2628;InbreedingCoeff=0.3744;MQ=57.39;MQ0=14;MQRankSum=-0.678;QD=9.82;ReadPosRankSum=-1.475;VQSLOD=2.3936;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:24.14:24,0,125	1/1:9,0:9:18.03:325,18,0	./.	./.	0/1:22,0:24:27.72:54,0,28	0/0:13,0:14:12.93:0,13,229	0/0:18,0:20:26.96:0,27,524	1/1:22,0:19:3.48:38,3,0	0/0:12,0:13:9.03:0,9,162	1/1:15,0:15:16.39:305,16,0	1/1:14,0:14:6.02:155,6,0	0/0:6,0:6:3.01:0,3,42	1/1:10,0:14:9.03:116,9,0	0/1:16,0:18:28.57:198,0,29	1/1:11,0:14:2.45:38,2,0	0/0:12,0:12:3:0,3,30	0/1:17,1:19:25.52:88,0,26	1/1:13,0:13:12.98:227,13,0	1/1:23,0:23:18.05:374,18,0	1/1:33,0:33:9.78:304,10,0	1/1:34,0:34:26.33:484,26,0	0/0:18,0:20:15.05:0,15,252	0/0:16,0:18:6.02:0,6,95	0/1:15,0:14:17:17,0,17	1/1:7,2:12:2.80:95,3,0	1/1:25,0:31:25.88:395,26,0	1/1:16,6:22:14.48:332,14,0	1/1:7,0:18:12.04:153,12,0
chr10	80288659	.	GAA	G	478.38	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.905;DP=425;FS=2.152;HRun=7;HaplotypeScore=57.3527;InbreedingCoeff=0.9652;MQ=85.23;MQ0=0;MQRankSum=-1.523;QD=25.18;ReadPosRankSum=0.297;VQSLOD=2.5279;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:45.14:573,45,0	0/0:11,0:11:33.11:0,33,577	0/0:20,0:20:46.03:0,46,723	0/0:19,0:19:38.83:0,39,554	0/0:17,0:17:51.14:0,51,860	0/0:14,0:14:42.14:0,42,735	0/0:10,0:11:30.03:0,30,462	0/0:25,0:25:69.23:0,69,1180	0/0:12,0:12:33.11:0,33,577	0/0:20,0:20:60.21:0,60,1050	0/0:12,0:12:30.09:0,30,497	0/0:10,0:10:30.09:0,30,493	0/0:16,0:16:48.15:0,48,795	0/0:16,0:16:45.15:0,45,787	0/0:15,0:15:42.14:0,42,735	0/0:10,0:10:24.08:0,24,420	0/0:11,0:11:33.10:0,33,550	0/0:10,0:10:30.10:0,30,513	0/0:19,0:19:51.16:0,51,865	0/0:16,0:16:36.11:0,36,604	0/0:17,0:17:45.13:0,45,757	0/0:11,0:11:33.11:0,33,577	0/0:15,0:15:45.15:0,45,757	0/0:14,0:14:39.13:0,39,682	0/0:18,0:18:48.16:0,48,834	0/0:18,0:18:48.16:0,48,840	0/0:23,0:23:69.24:0,69,1207	0/0:6,0:6:12.04:0,12,210
chr10	80289763	.	G	GA	528.32	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.022;DP=609;FS=5.625;HRun=8;HaplotypeScore=57.0811;InbreedingCoeff=0.9944;MQ=79.03;MQ0=0;MQRankSum=-1.689;QD=24.01;ReadPosRankSum=0.391;VQSLOD=4.3543;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.03:0,54,494	0/0:10,0:10:30.02:0,30,275	0/0:15,0:16:35.04:0,35,306	0/0:14,0:14:36.02:0,36,329	0/0:29,0:29:72.01:0,72,659	1/1:4,18:22:54.16:623,54,0	0/0:14,0:14:36.02:0,36,329	0/0:22,0:22:57.01:0,57,517	0/0:20,0:20:54.03:0,54,494	0/0:25,0:25:69.01:0,69,625	0/0:24,0:24:66.01:0,66,599	0/0:14,0:14:42.02:0,42,384	0/0:30,0:30:60.36:0,60,712	0/0:22,0:22:63.02:0,63,573	0/0:26,1:27:40.42:0,40,624	0/0:23,0:23:63.02:0,63,577	0/0:13,0:13:39:0,39,351	0/0:13,0:13:23.99:0,24,219	0/0:23,0:23:54.01:0,54,494	0/0:27,1:28:45.35:0,45,580	0/0:14,0:14:32.99:0,33,296	0/0:32,0:32:84.01:0,84,763	0/0:38,0:37:99:0,108,988	0/0:14,0:14:36.02:0,36,330	0/0:29,0:29:81.04:0,81,741	0/0:32,0:32:80.71:0,81,725	0/0:33,0:33:87.03:0,87,791	0/0:8,0:8:24.01:0,24,220
chr10	80290851	.	CCTCTCT	C	913.14	PASS	AB=0.990;AC=17;AF=0.386;AN=44;BaseQRankSum=3.821;DP=477;FS=17.946;HRun=0;HaplotypeScore=110.5290;InbreedingCoeff=0.3945;MQ=61.91;MQ0=10;MQRankSum=0.915;QD=4.96;ReadPosRankSum=1.460;VQSLOD=0.5394;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,1:31:33.29:78,0,33	./.	./.	./.	0/0:18,0:18:6.01:0,6,121	0/0:8,0:10:0.47:0,0,1	1/1:16,1:17:6.02:97,6,0	0/0:29,0:27:3.90:0,4,46	1/1:10,0:11:6.62:74,7,0	0/0:25,0:24:2.48:0,2,81	0/1:16,0:16:18.93:53,0,19	0/1:15,0:15:6.20:54,0,6	1/1:13,0:14:10.10:166,10,0	0/0:10,0:11:5.94:0,6,43	1/1:18,0:19:7.53:120,8,0	0/0:9,0:9:9.02:0,9,160	0/0:11,0:11:5.96:0,6,45	0/0:19,0:18:24.08:0,24,586	0/0:15,0:14:6.02:0,6,146	./.	0/0:23,0:23:12.04:0,12,223	1/1:16,0:18:1.25:3,1,0	./.	1/1:19,2:20:17.96:334,18,0	0/0:14,0:15:3.01:0,3,50	1/1:19,0:19:4.77:81,5,0	0/0:9,0:9:6.02:0,6,179	./.
chr10	80290947	.	CGTGTGT	C	2038.66	PASS	AB=0.675;AC=28;AF=0.538;AN=52;BaseQRankSum=2.278;DP=545;FS=9.824;HRun=0;HaplotypeScore=148.5397;InbreedingCoeff=0.6251;MQ=48.42;MQ0=20;MQRankSum=-7.783;QD=7.01;ReadPosRankSum=-0.463;VQSLOD=1.8019;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:34:25.42:0,25,332	1/1:5,4:9:6.02:77,6,0	./.	./.	0/1:7,18:25:0.02:0,0,0	0/0:10,0:11:19.25:0,19,340	0/0:20,0:28:15.01:0,15,279	1/1:19,2:19:11.87:173,12,0	0/0:7,0:21:30.10:0,30,744	1/1:11,6:18:20.66:381,21,0	0/1:8,7:15:0.01:0,0,0	0/0:6,0:16:21.96:0,22,572	1/1:6,0:14:11.59:133,12,0	0/0:7,0:17:0:0,0,0	1/1:7,16:24:1.51:5,2,0	0/0:2,0:8:8.53:0,9,309	0/1:12,10:22:69.93:148,0,70	1/1:6,10:17:18.01:329,18,0	1/1:17,3:17:14.71:221,15,0	1/1:3,13:16:2.89:61,3,0	1/1:38,3:36:7.37:85,7,0	0/0:11,0:21:30.10:0,30,737	0/0:12,0:17:30.10:0,30,893	0/0:9,0:20:15.05:0,15,375	1/1:10,4:15:11.90:139,12,0	1/1:9,0:18:20.37:367,20,0	0/1:6,2:9:24.56:57,0,25	1/1:0,0:4:3.01:42,3,0
chr10	80291268	.	G	GA	8247.49	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-10.710;DP=502;FS=1.758;HRun=8;HaplotypeScore=46.7619;InbreedingCoeff=0.9816;MQ=63.25;MQ0=6;MQRankSum=-1.112;QD=25.22;ReadPosRankSum=1.257;VQSLOD=5.5119;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.02:0,72,653	1/1:0,5:5:15:158,15,0	0/0:8,0:7:14.95:0,15,128	0/0:12,0:11:23.23:0,23,240	1/1:4,24:26:69.12:765,69,0	1/1:2,10:12:27.08:311,27,0	0/0:23,0:23:47.97:0,48,425	1/1:5,20:25:60.16:680,60,0	0/0:17,0:17:42.02:0,42,384	1/1:6,21:27:38.68:667,39,0	1/1:1,13:14:30.06:332,30,0	0/0:13,0:13:30:0,30,271	1/1:2,7:9:18.05:207,18,0	1/1:4,15:19:30.09:346,30,0	1/1:3,6:9:18.05:208,18,0	0/0:15,0:15:36.02:0,36,329	1/1:0,26:26:63.19:727,63,0	1/1:1,21:23:60.01:672,60,0	1/1:6,10:16:32.90:345,33,0	1/1:0,16:16:36.07:401,36,0	1/1:3,14:17:30.09:346,30,0	0/0:28,0:28:63:0,63,571	0/0:21,0:20:53.95:0,54,483	0/0:10,0:10:21.01:0,21,192	1/1:3,15:18:47.97:534,48,0	1/1:5,11:16:8.59:330,9,0	1/1:2,25:27:60.18:692,60,0	1/1:2,16:17:23.72:526,24,0
chr10	80292364	.	AT	A	371.83	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.926;DP=504;FS=2.000;HRun=9;HaplotypeScore=57.5367;InbreedingCoeff=0.9075;MQ=75.76;MQ0=0;MQRankSum=-2.061;QD=18.59;ReadPosRankSum=1.668;VQSLOD=4.0855;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:51.02:467,51,0	0/0:6,0:7:17.89:0,18,188	0/0:15,0:15:30.08:0,30,337	0/0:8,0:8:15.51:0,16,159	0/0:32,0:32:78.22:0,78,890	0/0:25,0:25:66.20:0,66,762	0/0:9,0:9:21.06:0,21,242	0/0:24,0:24:63.64:0,64,711	0/0:10,0:10:30.09:0,30,346	0/0:20,1:21:20.67:0,21,485	0/0:27,0:28:81.06:0,81,905	0/0:17,0:17:45.13:0,45,519	0/0:24,0:24:66.20:0,66,762	0/0:13,0:13:36.09:0,36,399	0/0:16,0:16:48.13:0,48,545	0/0:18,0:17:51.11:0,51,574	0/0:10,0:10:24.06:0,24,267	0/0:10,0:10:27.08:0,27,311	0/0:25,0:25:69.18:0,69,772	0/0:28,0:28:81.24:0,81,935	0/0:12,0:12:33.09:0,33,372	0/0:15,0:15:36.09:0,36,405	0/0:30,0:30:81.24:0,81,935	0/0:8,0:8:18.05:0,18,208	0/0:18,0:18:48.14:0,48,554	0/0:22,0:22:48.14:0,48,546	0/0:33,0:32:93.25:0,93,1054	0/0:6,0:6:9.03:0,9,104
chr10	80293735	.	CATTCCAT	C	1350.99	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.687;DP=641;FS=3.143;HRun=0;HaplotypeScore=140.7096;InbreedingCoeff=0.9915;MQ=60.58;MQ0=5;MQRankSum=-7.185;QD=58.74;ReadPosRankSum=0.353;VQSLOD=3.4288;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.31:0,90,3374	0/0:11,0:11:33.11:0,33,1269	0/0:16,0:8:19.61:0,20,475	0/0:23,0:14:39.13:0,39,1178	0/0:34,0:34:96.33:0,96,3645	1/1:3,20:23:57.20:1446,57,0	0/0:15,0:15:33.11:0,33,1301	0/0:40,0:39:99:0,108,4081	0/0:25,0:25:75.26:0,75,2946	0/0:31,0:31:93.32:0,93,3454	0/0:20,0:20:57.18:0,57,2025	0/0:24,0:24:63.22:0,63,2400	0/0:24,0:24:69.22:0,69,2536	0/0:11,0:11:33.11:0,33,1254	0/0:25,0:25:69.24:0,69,2708	0/0:15,0:15:42.13:0,42,1486	0/0:17,0:17:51.18:0,51,2004	0/0:23,0:23:63.69:0,64,2461	0/0:22,0:20:48.16:0,48,1892	0/0:25,0:25:69.24:0,69,2666	0/0:21,0:21:57.18:0,57,2138	0/0:34,0:34:93.32:0,93,3534	0/0:31,0:31:90.31:0,90,3376	0/0:15,0:15:42.14:0,42,1645	0/0:24,0:23:69.24:0,69,2692	0/0:30,0:30:84.29:0,84,3311	0/0:20,0:20:54.19:0,54,2048	0/0:10,0:10:24.08:0,24,846
chr10	80294416	.	GTT	G	9938.90	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=7.536;DP=548;FS=10.630;HRun=10;HaplotypeScore=70.5942;InbreedingCoeff=0.9952;MQ=57.63;MQ0=8;MQRankSum=3.987;QD=26.15;ReadPosRankSum=3.103;VQSLOD=3.7785;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:30:68.63:784,69,0	1/1:1,8:9:24.06:268,24,0	0/0:21,0:10:21.02:0,21,290	0/0:16,0:10:13.79:0,14,157	1/1:2,17:19:51.14:569,51,0	1/1:0,19:19:54.15:602,54,0	0/0:14,0:16:38.61:0,39,561	1/1:10,18:28:51.04:559,51,0	0/0:21,0:21:63.20:0,63,956	1/1:6,15:20:45.11:502,45,0	1/1:2,19:22:48.05:586,48,0	0/0:13,0:13:30.09:0,30,456	1/1:0,20:20:57.15:635,57,0	1/1:2,13:15:36.09:401,36,0	1/1:2,20:22:60.16:669,60,0	0/0:13,0:13:33.11:0,33,524	1/1:3,19:22:48.13:535,48,0	1/1:2,11:13:27.07:301,27,0	1/1:5,10:14:30.07:334,30,0	1/1:5,18:24:53.85:580,54,0	1/1:2,12:14:27.07:301,27,0	0/0:7,0:23:44.98:0,45,426	0/0:26,0:26:69.24:0,69,1093	0/0:17,0:18:45.14:0,45,693	1/1:1,18:20:53.88:581,54,0	1/1:9,22:31:38.35:663,38,0	1/1:1,20:21:54.14:602,54,0	1/1:1,14:15:42.11:468,42,0
chr10	80295191	.	C	CTT	2410.42	PASS	AB=0.599;AC=30;AF=0.536;AN=56;BaseQRankSum=7.720;DP=481;FS=1.965;HRun=11;HaplotypeScore=73.3254;InbreedingCoeff=0.6062;MQ=68.41;MQ0=1;MQRankSum=-1.076;QD=7.24;ReadPosRankSum=-1.485;VQSLOD=0.1525;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:26:29.85:267,30,0	1/1:0,0:7:14.97:51,15,0	0/0:6,0:6:1.90:0,2,51	0/0:12,0:12:1.17:0,1,45	1/1:8,1:25:10.75:174,11,0	1/1:9,0:21:21.93:221,22,0	0/0:3,0:3:6:0,6,58	1/1:9,0:29:24.95:174,25,0	0/0:16,0:16:36.02:0,36,349	1/1:6,0:20:28.81:108,29,0	1/1:5,1:26:28.24:219,28,0	0/0:10,0:11:20.84:0,21,253	0/0:19,0:19:42.03:0,42,407	0/0:14,0:15:5.83:0,6,221	0/1:2,0:14:27.21:55,0,27	0/0:9,0:9:24.03:0,24,233	0/1:8,0:14:24.30:24,0,34	1/1:8,1:23:37.94:164,38,0	0/1:5,0:15:26.76:67,0,27	1/1:8,0:29:44.32:191,44,0	1/1:3,0:13:17.47:60,17,0	0/0:18,0:19:44.79:0,45,419	0/0:26,0:30:41.58:0,42,489	0/0:8,0:8:23.99:0,24,223	0/1:5,0:16:29.73:49,0,30	1/1:1,16:20:47.48:532,47,0	1/1:7,0:22:20.24:86,20,0	1/1:2,6:8:12.04:174,12,0
chr10	80297143	.	C	CT	883.93	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.761;DP=625;FS=1.746;HRun=1;HaplotypeScore=57.8213;InbreedingCoeff=0.9456;MQ=57.18;MQ0=5;MQRankSum=2.534;QD=30.48;ReadPosRankSum=2.071;VQSLOD=3.4518;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.20:0,66,840	0/0:14,0:14:39.13:0,39,506	0/0:28,0:15:39.13:0,39,506	0/0:19,0:15:39.13:0,39,505	0/0:34,0:34:99:0,99,1264	0/0:26,0:26:78.22:0,78,982	0/0:13,0:13:36.12:0,36,467	0/0:23,0:23:63.20:0,63,804	0/0:22,0:22:66.21:0,66,857	0/0:29,0:29:81.26:0,81,1050	0/0:33,0:33:93.30:0,93,1206	0/0:16,0:16:48.16:0,48,623	1/1:1,9:10:27.09:405,27,0	1/1:1,18:19:6.30:591,6,0	0/0:27,0:27:81.23:0,81,1023	0/0:17,0:17:45.14:0,45,571	0/0:24,0:24:72.20:0,72,904	0/0:16,0:16:42.14:0,42,545	0/0:15,0:13:36.12:0,36,468	0/0:36,0:36:99:0,108,1402	0/0:23,0:23:66.18:0,66,825	0/0:18,0:18:51.15:0,51,647	0/0:25,0:25:72.23:0,72,934	0/0:20,0:20:54.16:0,54,686	0/0:27,0:27:81.25:0,81,1037	0/0:25,0:25:72.23:0,72,935	0/0:28,0:28:84.27:0,84,1091	0/0:13,0:13:39.13:0,39,506
chr10	80297573	.	A	AT	1132.49	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.086;DP=602;FS=2.320;HRun=4;HaplotypeScore=58.4192;InbreedingCoeff=0.9939;MQ=64.45;MQ0=1;MQRankSum=-0.819;QD=32.36;ReadPosRankSum=0.647;VQSLOD=4.1605;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:54.12:0,54,599	0/0:7,0:7:21.06:0,21,238	0/0:21,0:20:54.13:0,54,593	0/0:11,0:10:22.30:0,22,235	0/0:30,0:30:87.25:0,87,987	0/0:26,0:26:69.18:0,69,772	0/0:9,0:9:24.07:0,24,272	0/0:30,0:29:75.20:0,75,843	0/0:24,0:24:63.18:0,63,715	0/0:26,0:26:72.19:0,72,801	0/0:28,0:28:69.19:0,69,783	0/0:14,0:14:42.12:0,42,476	0/0:24,0:24:69.20:0,69,783	0/0:38,0:38:99:0,114,1264	0/0:24,0:24:69.15:0,69,753	0/0:32,0:32:96.26:0,96,1079	0/0:17,0:17:48.14:0,48,544	0/0:15,0:15:39.11:0,39,442	0/0:26,0:26:66.19:0,66,748	0/0:28,0:28:78.22:0,78,884	0/0:15,0:15:42.10:0,42,465	0/0:18,0:18:51.14:0,51,579	0/0:19,0:19:57.15:0,57,636	0/0:13,0:13:39.11:0,39,442	0/0:22,0:22:60.17:0,60,681	1/1:3,18:21:23.13:687,23,0	0/0:25,0:25:72.21:0,72,817	1/1:1,13:14:42.14:567,42,0
chr10	80297797	.	C	CGTGT	2519.32	PASS	AB=0.931;AC=30;AF=0.625;AN=48;BaseQRankSum=1.828;DP=450;FS=3.530;HRun=0;HaplotypeScore=106.0501;InbreedingCoeff=0.4293;MQ=67.08;MQ0=5;MQRankSum=-2.062;QD=8.51;ReadPosRankSum=-2.595;VQSLOD=2.2020;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:13,2:20:0.93:65,0,1	./.	./.	0/0:33,0:26:0:0,0,0	1/1:22,0:22:5.98:118,6,0	1/1:8,0:9:2.74:13,3,0	0/1:10,0:11:13.51:14,0,22	1/1:25,0:25:17.98:257,18,0	0/0:14,0:16:12.03:0,12,167	1/1:22,0:22:24.04:350,24,0	1/1:20,0:20:8.54:149,9,0	0/0:4,0:4:6.02:0,6,92	0/0:12,0:16:14.89:0,15,130	0/0:9,0:10:3:0,3,28	1/1:15,0:15:3.01:50,3,0	0/0:14,0:16:15.04:0,15,191	1/1:15,0:15:9.03:158,9,0	./.	1/1:25,0:24:27.09:477,27,0	1/1:11,0:11:3.48:50,3,0	./.	0/0:4,0:4:11.99:0,12,139	0/1:11,0:12:11.09:11,0,39	0/1:26,0:26:11.95:12,0,127	1/1:11,0:10:2.53:49,3,0	1/1:14,5:21:30.06:505,30,0	1/1:22,0:22:18.02:278,18,0	1/1:4,1:7:6.02:122,6,0
chr10	80297830	.	G	GTGTGTGTGTA	2865.18	PASS	AB=0.886;AC=24;AF=0.429;AN=56;BaseQRankSum=-1.915;DP=490;FS=18.142;HRun=0;HaplotypeScore=134.3520;InbreedingCoeff=0.5624;MQ=52.84;MQ0=19;MQRankSum=2.190;QD=10.57;ReadPosRankSum=0.225;VQSLOD=1.6433;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:17:7.74:0,8,105	1/1:9,0:9:11.83:89,12,0	0/0:23,0:11:24.83:0,25,202	0/0:30,0:16:31.20:0,31,273	1/1:21,0:21:6.50:253,6,0	0/0:13,0:9:20.97:0,21,183	0/0:17,0:17:37.41:0,37,340	1/1:31,0:30:21.73:397,22,0	0/0:14,0:14:26.35:0,26,459	1/1:32,0:32:5.08:451,5,0	1/1:20,0:19:30.40:295,30,0	0/0:10,0:10:20.98:0,21,309	0/0:14,0:13:26.91:0,27,405	0/0:14,0:13:26.96:0,27,270	0/1:3,12:18:12.97:148,0,13	0/0:12,0:12:30.01:0,30,527	1/1:14,0:14:13.17:117,13,0	0/0:2,0:2:0.47:0,0,1	0/1:23,0:20:4.69:378,0,5	1/1:4,0:9:3.01:56,3,0	1/1:22,0:19:0.29:141,0,0	0/0:10,0:9:26.99:0,27,377	0/0:14,0:12:22.79:0,23,242	0/0:26,0:26:10.52:0,11,483	1/1:7,7:15:3.01:152,3,0	0/1:18,0:18:85.04:134,0,85	1/1:24,0:26:23.83:420,24,0	0/1:11,0:10:25.89:26,0,69
chr10	80298027	.	T	TA	180.20	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=-2.222;DP=341;FS=0.000;HRun=7;HaplotypeScore=34.9806;InbreedingCoeff=0.7675;MQ=66.31;MQ0=0;MQRankSum=-0.250;QD=15.02;ReadPosRankSum=-0.669;VQSLOD=2.2039;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:45.07:0,45,434	0/0:5,0:5:15.01:0,15,139	0/0:3,0:3:6:0,6,56	0/0:2,0:3:4.82:0,5,34	0/0:33,0:33:90.13:0,90,865	0/0:15,0:15:39.06:0,39,376	0/0:2,0:2:6.01:0,6,58	0/0:26,0:26:69.10:0,69,663	0/0:8,0:8:21.03:0,21,203	0/0:19,0:19:57.09:0,57,550	0/0:23,0:23:66.11:0,66,637	0/0:7,0:7:18.02:0,18,170	1/1:0,4:4:12.04:145,12,0	1/1:0,8:7:12.04:145,12,0	0/0:10,0:10:30.05:0,30,290	0/0:13,0:13:36.06:0,36,348	0/0:13,0:13:36.06:0,36,347	0/0:11,0:11:12.45:0,12,232	0/0:18,0:18:48.06:0,48,454	0/0:20,0:20:51.08:0,51,493	0/0:5,0:5:15.02:0,15,145	./.	0/0:8,0:8:18.03:0,18,174	0/0:4,0:4:12.02:0,12,116	0/0:13,0:13:29.92:0,30,267	0/0:20,0:20:60.10:0,60,579	0/0:26,0:26:69.11:0,69,666	0/0:6,0:6:15.02:0,15,145
chr10	80298399	.	AT	A	919.26	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.038;DP=512;FS=8.134;HRun=7;HaplotypeScore=48.1754;InbreedingCoeff=0.9394;MQ=77.23;MQ0=0;MQRankSum=-4.144;QD=25.54;ReadPosRankSum=1.198;VQSLOD=3.8603;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:42.10:429,42,0	0/0:8,0:8:21.07:0,21,264	0/0:10,0:10:24.07:0,24,286	0/0:15,0:15:29.97:0,30,320	0/0:25,0:25:75.24:0,75,943	1/1:1,21:22:60.14:612,60,0	0/0:11,0:11:30.10:0,30,377	0/0:33,0:33:87.27:0,87,1084	0/0:23,0:23:63.20:0,63,792	0/0:22,0:22:51.16:0,51,632	0/0:27,0:27:72.23:0,72,906	0/0:15,0:15:45.14:0,45,566	0/0:19,0:19:57.18:0,57,717	0/0:19,0:19:51.16:0,51,642	0/0:15,0:15:36.12:0,36,453	0/0:14,0:14:42.13:0,42,528	0/0:6,0:6:18.02:0,18,209	0/0:2,0:2:5.98:0,6,58	0/0:25,0:25:69.15:0,69,848	0/0:29,0:29:81.26:0,81,1019	0/0:20,0:20:57.17:0,57,703	0/0:14,0:14:39.12:0,39,491	0/0:32,0:32:90.25:0,90,1114	0/0:11,0:11:27.09:0,27,340	0/0:15,0:15:42.13:0,42,517	0/0:19,0:19:48.15:0,48,604	0/0:32,0:32:90.28:0,90,1121	0/0:15,0:15:24.08:0,24,302
chr10	80299452	.	TG	T	1930.36	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=11.622;DP=636;FS=3.861;HRun=3;HaplotypeScore=65.7299;InbreedingCoeff=0.9484;MQ=70.51;MQ0=0;MQRankSum=-1.490;QD=32.17;ReadPosRankSum=2.267;VQSLOD=4.1027;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:94.84:1119,95,0	0/0:14,0:14:42.14:0,42,605	0/0:24,0:21:60.20:0,60,861	0/0:24,0:23:67.74:0,68,886	0/0:35,0:35:99:0,105,1499	1/1:1,27:28:78.24:932,78,0	0/0:18,0:17:45.14:0,45,632	0/0:26,0:25:72.24:0,72,1035	0/0:24,0:24:66.22:0,66,950	0/0:32,0:32:96.32:0,96,1383	0/0:31,0:31:87.28:0,87,1232	0/0:15,0:15:45.09:0,45,607	0/0:23,0:23:66.22:0,66,949	0/0:14,0:14:36.11:0,36,500	0/0:17,0:17:51.16:0,51,716	0/0:18,0:18:54.18:0,54,776	0/0:18,0:18:51.17:0,51,734	0/0:14,0:14:42.14:0,42,596	0/0:16,0:16:45.15:0,45,646	0/0:23,0:23:63.21:0,63,905	0/0:36,0:36:99:0,105,1511	0/0:25,0:25:75.25:0,75,1078	0/0:26,0:26:78.26:0,78,1123	0/0:22,0:22:66.20:0,66,931	0/0:14,0:14:42.14:0,42,604	0/0:32,0:32:96.29:0,96,1342	0/0:33,0:33:99:0,99,1369	0/0:2,0:2:6.02:0,6,86
chr10	80301606	.	A	AT	1413.59	PASS	AC=26;AF=0.520;AN=50;BaseQRankSum=5.056;DP=535;FS=1.940;HRun=1;HaplotypeScore=25.7225;InbreedingCoeff=0.6852;MQ=18.17;MQ0=282;MQRankSum=-0.598;QD=6.86;ReadPosRankSum=-0.886;VQSLOD=0.3830;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,2:2:3.01:37,3,0	./.	./.	1/1:18,4:6:6.02:74,6,0	0/0:31,0:14:17.29:0,17,126	0/0:16,0:2:3.01:0,3,39	1/1:19,5:2:6.02:74,6,0	0/0:25,0:10:14.65:0,15,180	1/1:21,2:5:5.52:74,6,0	1/1:14,9:10:13.97:165,14,0	0/0:17,0:9:12.04:0,12,152	0/0:23,0:7:6.02:0,6,78	0/0:21,0:6:6.02:0,6,74	1/1:9,12:13:36.08:429,36,0	0/0:33,0:12:18.06:0,18,224	1/1:4,2:1:3.01:37,3,0	1/1:10,2:3:3.01:36,3,0	1/1:4,3:3:6.02:74,6,0	1/1:6,5:2:6.02:74,6,0	1/1:8,3:3:9.03:111,9,0	0/0:28,0:15:18.06:0,18,233	0/0:30,0:6:9.03:0,9,109	0/0:27,0:12:9.03:0,9,116	1/1:7,2:3:3.01:37,3,0	0/0:30,0:12:29.49:0,29,191	1/1:19,12:12:30.09:369,30,0	0/0:7,0:2:2.98:0,3,21
chr10	80301641	.	CA	C	990.79	PASS	AC=22;AF=0.478;AN=46;BaseQRankSum=4.640;DP=416;FS=14.710;HRun=5;HaplotypeScore=24.8655;InbreedingCoeff=0.6581;MQ=25.49;MQ0=108;MQRankSum=-4.972;QD=8.06;ReadPosRankSum=3.583;VQSLOD=-0.5254;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:7,2:3:3.01:34,3,0	0/0:28,0:17:20.94:0,21,223	0/0:16,0:6:8.83:0,9,123	1/1:5,13:8:21.06:238,21,0	0/0:20,0:13:18.02:0,18,226	1/1:10,2:2:3.01:34,3,0	1/1:4,5:3:3.01:34,3,0	0/0:19,0:18:20.98:0,21,245	0/0:15,0:9:5.95:0,6,42	0/0:17,0:6:2.97:0,3,20	1/1:4,13:13:27.08:306,27,0	0/0:25,0:16:23.99:0,24,285	1/1:1,5:4:3.01:34,3,0	1/1:9,3:4:3.01:34,3,0	1/1:6,3:6:9.02:102,9,0	1/1:1,4:1:3.01:34,3,0	./.	0/0:27,0:19:9:0,9,103	0/0:18,0:7:6.02:0,6,81	0/0:24,0:16:3.01:0,3,41	1/1:2,3:2:3.01:34,3,0	0/0:26,0:15:39.13:0,39,532	1/1:10,11:14:24.07:272,24,0	0/0:6,0:5:9.03:0,9,123
chr10	80322942	.	G	GT	108.69	PASS	AC=6;AF=0.75;AN=8;BaseQRankSum=-0.731;DP=57;FS=0.000;HRun=1;HaplotypeScore=13.9922;MQ=37.74;MQ0=26;MQRankSum=-0.731;QD=8.36;ReadPosRankSum=0.731;VQSLOD=0.6395;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:14,0:1:2.74:0,3,12	./.	./.	./.	./.	./.	./.	./.	1/1:1,2:2:3.01:45,3,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,5:5:3.01:45,3,0	./.	./.	./.	./.	1/1:1,4:5:6.02:90,6,0	./.	./.	./.
chr10	80325782	.	GA	G	519.12	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.388;DP=554;FS=8.743;HRun=2;HaplotypeScore=97.8447;InbreedingCoeff=0.9976;MQ=57.13;MQ0=1;MQRankSum=-1.871;QD=25.96;ReadPosRankSum=-1.210;VQSLOD=2.3227;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:48.15:614,48,0	0/0:10,0:10:27.09:0,27,404	0/0:17,0:14:36.06:0,36,480	0/0:26,0:25:72.06:0,72,956	0/0:36,0:36:93.31:0,93,1381	0/0:21,0:21:63.21:0,63,943	0/0:18,0:18:54.18:0,54,808	0/0:31,0:31:90.30:0,90,1343	0/0:20,0:20:57.19:0,57,853	0/0:28,0:28:81.26:0,81,1192	0/0:24,0:24:69.19:0,69,1008	0/0:14,0:14:39.04:0,39,515	0/0:18,0:18:48.12:0,48,693	0/0:15,0:15:42.06:0,42,580	0/0:20,0:20:54.18:0,54,809	0/0:17,0:17:45.15:0,45,674	0/0:16,0:16:48.14:0,48,694	0/0:10,0:10:30.10:0,30,449	0/0:15,0:15:42.14:0,42,629	0/0:25,0:25:75.21:0,75,1090	0/0:15,0:15:42.14:0,42,629	0/0:17,0:17:42.14:0,42,628	0/0:26,0:26:75.25:0,75,1123	0/0:13,0:13:39.13:0,39,584	0/0:20,0:20:57.11:0,57,786	0/0:26,0:26:75.24:0,75,1103	0/0:26,0:25:75.25:0,75,1110	0/0:10,0:10:30.10:0,30,450
chr10	80326322	.	AACACACACAC	A	476.60	PASS	AB=0.889;AC=13;AF=0.283;AN=46;BaseQRankSum=2.944;DP=433;FS=1.803;HRun=0;HaplotypeScore=116.9029;InbreedingCoeff=0.3121;MQ=65.37;MQ0=17;MQRankSum=-1.285;QD=3.38;ReadPosRankSum=0.437;VQSLOD=2.3470;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:27:24.11:0,24,279	./.	./.	./.	0/0:17,0:15:9:0,9,84	1/1:7,5:12:3.01:88,3,0	0/0:20,0:19:19:0,19,449	0/0:16,0:16:5.38:0,5,42	0/0:8,0:8:3.01:0,3,48	0/1:18,1:19:18.81:107,0,19	./.	0/0:10,0:9:6.02:0,6,162	0/0:8,0:8:9.01:0,9,193	0/0:13,0:13:12.04:0,12,284	./.	1/1:8,0:8:2.96:20,3,0	0/0:14,0:13:8.31:0,8,87	1/1:13,0:12:0.30:35,0,0	1/1:13,2:14:5.23:95,5,0	0/1:13,0:16:35.16:49,0,35	0/1:41,0:37:74.69:109,0,75	0/0:5,0:7:12.04:0,12,249	0/0:15,0:14:3.01:0,3,70	0/0:25,0:26:27.07:0,27,669	1/1:12,0:12:6.02:110,6,0	0/0:14,0:16:8.61:0,9,84	0/0:13,0:12:11.97:0,12,116	0/0:4,0:4:6.02:0,6,98
chr10	80326560	.	C	CT	2560.39	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-2.900;DP=419;FS=11.716;HRun=0;HaplotypeScore=55.3874;InbreedingCoeff=0.9823;MQ=82.47;MQ0=0;MQRankSum=-6.826;QD=40.64;ReadPosRankSum=2.292;VQSLOD=3.4646;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:66.21:1021,66,0	0/0:6,0:6:18.06:0,18,250	0/0:18,0:18:45.15:0,45,610	0/0:17,0:17:51.17:0,51,713	0/0:22,0:22:63.20:0,63,856	0/0:14,0:14:39.12:0,39,526	0/0:14,0:14:39.13:0,39,544	0/0:26,0:26:72.23:0,72,977	0/0:7,0:7:18.06:0,18,250	0/0:23,0:23:60.20:0,60,838	0/0:16,0:16:48.15:0,48,654	0/0:16,0:16:45.11:0,45,606	0/0:9,0:9:27.07:0,27,355	0/0:8,0:8:21.07:0,21,288	0/0:10,0:10:30.10:0,30,419	0/0:6,0:6:18.06:0,18,245	0/0:23,0:23:63.21:0,63,874	0/0:8,0:8:24.06:0,24,317	0/0:5,0:5:15.05:0,15,207	0/0:26,0:26:78.26:0,78,1087	0/0:9,0:9:27.09:0,27,377	0/0:15,0:15:45.14:0,45,612	0/0:24,0:24:72.22:0,72,969	0/0:12,0:12:36.03:0,36,459	0/0:10,0:10:30.10:0,30,419	1/1:2,23:25:33.37:1088,33,0	0/0:12,0:12:30.10:0,30,409	1/1:5,10:15:42.09:595,42,0
chr10	80326600	.	T	TAA	10371.98	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-7.495;DP=441;FS=0.428;HRun=8;HaplotypeScore=57.1843;InbreedingCoeff=0.9908;MQ=81.20;MQ0=1;MQRankSum=-2.628;QD=33.57;ReadPosRankSum=0.554;VQSLOD=4.6368;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:24:51.13:781,51,0	1/1:1,6:7:18.06:286,18,0	0/0:19,0:19:17.91:0,18,333	0/0:20,0:17:29.65:0,30,302	1/1:4,25:30:77.71:1171,78,0	1/1:0,0:18:39.93:137,40,0	0/0:11,0:11:27.05:0,27,291	1/1:6,13:21:44.55:579,45,0	0/0:14,0:14:36.08:0,36,392	1/1:2,18:21:45.15:710,45,0	1/1:0,16:16:45.11:687,45,0	0/0:10,0:10:30.08:0,30,334	0/0:9,0:9:18.02:0,18,201	0/0:6,0:6:18.03:0,18,191	1/1:2,13:15:33.11:524,33,0	1/1:2,8:10:21.07:333,21,0	1/1:1,16:19:44.12:636,44,0	1/1:1,6:7:15.05:238,15,0	1/1:2,8:10:24.04:350,24,0	1/1:4,12:17:39.02:519,39,0	1/1:3,7:10:21.07:333,21,0	0/0:10,0:10:30.07:0,30,325	0/0:20,0:20:51.07:0,51,543	0/0:12,0:12:33.08:0,33,368	1/1:0,15:17:47.64:704,48,0	1/1:8,13:22:48.13:680,48,0	1/1:1,23:25:66.18:1012,66,0	1/1:2,17:19:45.14:692,45,0
chr10	80326855	.	GC	G	1123.35	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.070;DP=600;FS=3.271;HRun=2;HaplotypeScore=57.7207;InbreedingCoeff=0.9939;MQ=88.70;MQ0=0;MQRankSum=-3.279;QD=28.80;ReadPosRankSum=2.437;VQSLOD=3.3798;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1637	0/0:6,0:6:18.05:0,18,251	0/0:20,0:20:54.15:0,54,744	0/0:23,0:23:40.08:0,40,757	0/0:30,0:30:90.27:0,90,1286	0/0:31,0:31:93.25:0,93,1311	0/0:23,0:23:69.22:0,69,1010	0/0:26,0:26:75.21:0,75,1033	0/0:26,0:26:75.24:0,75,1103	0/0:21,0:21:60.20:0,60,898	0/0:18,0:18:51.15:0,51,723	0/0:10,0:10:30.10:0,30,449	1/1:0,17:17:42.14:544,42,0	1/1:0,22:22:54.18:701,54,0	0/0:26,0:26:78.25:0,78,1146	0/0:19,0:19:57.17:0,57,814	0/0:14,0:14:42.14:0,42,628	0/0:24,0:24:70.03:0,70,985	0/0:17,0:17:51.11:0,51,720	0/0:29,0:29:84.28:0,84,1254	0/0:21,0:21:63.21:0,63,942	0/0:14,0:14:42.13:0,42,608	0/0:27,0:27:81.27:0,81,1213	0/0:8,0:8:24.05:0,24,336	0/0:23,0:23:63.19:0,63,906	0/0:16,0:16:45.14:0,45,656	0/0:43,0:43:99:0,126,1824	0/0:9,0:9:27.09:0,27,404
chr10	80327555	.	T	TA	10735.71	PASS	AB=0.571;AC=35;AF=0.625;AN=56;BaseQRankSum=-14.120;DP=511;FS=1.182;HRun=6;HaplotypeScore=43.3110;InbreedingCoeff=0.9526;MQ=81.40;MQ0=0;MQRankSum=-3.218;QD=31.67;ReadPosRankSum=2.043;VQSLOD=5.0598;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.11:0,54,544	1/1:2,6:8:18.06:226,18,0	0/0:12,0:12:27.05:0,27,269	0/0:17,0:17:38.83:0,39,352	1/1:1,30:31:87.28:1095,87,0	0/0:20,0:20:60.14:0,60,612	0/0:10,0:10:24.05:0,24,245	1/1:6,15:21:45.14:566,45,0	0/0:21,0:21:60.11:0,60,604	1/1:3,16:19:51.16:638,51,0	1/1:2,19:21:54.13:659,54,0	0/0:11,0:11:27.06:0,27,275	1/1:4,19:23:54.17:679,54,0	1/1:4,13:17:36.11:452,36,0	1/1:1,18:19:51.16:642,51,0	0/1:4,12:16:0.52:310,0,1	1/1:0,15:15:45.14:566,45,0	1/1:2,5:7:12.04:151,12,0	1/1:3,14:17:45.10:547,45,0	1/1:4,31:35:81.22:1001,81,0	1/1:0,16:16:48.15:604,48,0	0/0:26,0:26:72.16:0,72,734	0/0:26,0:26:72.12:0,72,719	0/0:9,0:9:24.04:0,24,238	1/1:1,15:16:42.13:528,42,0	1/1:2,23:25:69.22:868,69,0	1/1:2,18:20:57.18:713,57,0	1/1:0,13:13:39.12:491,39,0
chr10	80327690	.	CA	C	9265.69	PASS	AB=0.938;AC=39;AF=0.696;AN=56;BaseQRankSum=10.220;DP=522;FS=1.281;HRun=9;HaplotypeScore=51.4620;InbreedingCoeff=0.9426;MQ=77.98;MQ0=1;MQRankSum=-1.745;QD=23.28;ReadPosRankSum=2.860;VQSLOD=5.6159;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:26:63.03:577,63,0	1/1:0,9:9:18.01:165,18,0	0/1:14,1:15:2.15:2,0,238	0/0:10,0:10:17.82:0,18,170	1/1:4,29:33:75.03:687,75,0	1/1:1,26:27:75.03:686,75,0	0/0:13,0:13:33.09:0,33,372	1/1:3,23:26:69.04:631,69,0	0/0:15,0:15:36.07:0,36,388	1/1:0,24:24:72.04:659,72,0	1/1:4,17:21:51.02:467,51,0	0/0:11,0:11:30.08:0,30,338	0/0:17,0:17:45.13:0,45,519	0/0:18,0:18:48.12:0,48,536	1/1:0,18:18:54.03:494,54,0	1/1:2,9:11:27.01:247,27,0	1/1:0,19:19:57.03:522,57,0	1/1:1,14:14:36.02:329,36,0	1/1:2,19:21:57.02:518,57,0	1/1:3,24:27:72.02:654,72,0	1/1:1,11:12:30.02:275,30,0	1/1:2,18:20:51.03:467,51,0	0/0:27,0:27:69.20:0,69,796	0/0:13,0:13:33.09:0,33,372	1/1:1,14:15:36.02:330,36,0	1/1:0,24:24:72:652,72,0	1/1:1,29:30:84.05:769,84,0	1/1:0,5:5:15.01:137,15,0
chr10	80327979	.	C	CTTT	4378.15	PASS	AB=0.724;AC=32;AF=0.571;AN=56;BaseQRankSum=0.166;DP=432;FS=2.385;HRun=14;HaplotypeScore=80.2125;InbreedingCoeff=0.6500;MQ=65.43;MQ0=1;MQRankSum=-1.493;QD=15.05;ReadPosRankSum=-2.584;VQSLOD=3.0472;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:30:16.21:16,0,38	1/1:2,5:9:19.18:220,19,0	0/0:13,0:10:2.49:0,2,25	0/0:10,0:7:11.54:0,12,90	1/1:11,5:26:40.41:419,40,0	1/1:3,2:17:32.92:308,33,0	0/0:13,0:15:38.75:0,39,366	1/1:12,5:20:21:290,21,0	0/0:13,0:14:29.77:0,30,295	1/1:14,2:23:38.97:449,39,0	1/1:8,12:24:45.88:554,46,0	0/0:9,0:11:20.56:0,21,189	0/1:4,0:5:11.72:12,0,51	1/1:4,0:9:9.80:36,10,0	1/1:1,7:8:18.06:297,18,0	0/1:4,3:7:24.80:46,0,25	0/1:8,6:15:15.79:165,0,16	1/1:9,5:16:10.56:131,11,0	1/1:11,6:19:30.01:385,30,0	1/1:8,8:22:37.98:433,38,0	1/1:2,6:10:17.52:194,18,0	0/0:11,0:14:29.56:0,30,262	0/0:24,0:26:45.46:0,45,462	0/0:10,0:10:11.26:0,11,123	1/1:4,4:18:23.99:284,24,0	0/0:9,0:20:28.84:0,29,173	1/1:3,9:12:9.50:141,10,0	0/0:3,0:7:11.63:0,12,70
chr10	80328979	.	C	CT	857.19	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.790;DP=497;FS=1.499;HRun=7;HaplotypeScore=74.6012;InbreedingCoeff=0.8682;MQ=77.69;MQ0=0;MQRankSum=0.658;QD=25.21;ReadPosRankSum=0.830;VQSLOD=4.2352;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.03:0,45,417	0/0:6,0:6:18:0,18,166	0/0:20,0:18:4.60:0,5,96	0/0:10,0:7:11.69:0,12,88	0/0:34,0:34:99:0,99,945	0/0:2,0:18:24.44:0,24,72	0/0:13,0:13:36.04:0,36,342	0/0:33,0:33:72.08:0,72,683	0/0:11,0:11:30.04:0,30,285	0/0:23,0:23:57.07:0,57,546	0/0:18,0:18:48.06:0,48,460	0/0:12,0:12:33.03:0,33,308	1/1:1,22:23:54.17:652,54,0	1/1:1,10:11:27.08:326,27,0	0/0:21,0:21:57.05:0,57,534	0/0:15,0:15:45.04:0,45,423	0/0:22,0:22:56.93:0,57,520	0/0:13,0:13:33:0,33,304	0/0:11,0:11:30.02:0,30,279	0/0:26,0:26:72.10:0,72,691	0/0:15,0:15:36.04:0,36,341	0/0:19,0:19:42.04:0,42,398	0/0:21,0:21:60.06:0,60,565	0/0:2,0:2:6.01:0,6,58	0/0:17,0:17:51.03:0,51,473	0/0:22,0:23:45.64:0,46,168	0/0:27,0:27:72.11:0,72,695	0/0:16,0:16:23.29:0,23,86
chr10	80328984	.	T	TAA	874.24	PASS	AB=0.575;AC=3;AF=0.054;AN=56;BaseQRankSum=8.521;DP=485;FS=4.838;HRun=0;HaplotypeScore=82.1356;InbreedingCoeff=0.5989;MQ=77.55;MQ0=0;MQRankSum=-5.053;QD=23.63;ReadPosRankSum=0.067;VQSLOD=4.1042;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:45.15:0,45,734	0/0:6,0:6:18.06:0,18,292	0/0:19,0:17:33.58:0,34,401	0/0:13,0:9:9.24:0,9,253	0/0:36,0:36:99:0,105,1708	0/0:17,0:17:38.80:0,39,289	0/0:12,0:12:36.12:0,36,586	0/0:33,0:33:87.29:0,87,1387	0/0:10,0:10:30.10:0,30,490	0/0:23,0:23:66.23:0,66,1068	0/0:17,0:17:51.17:0,51,830	0/0:11,0:11:33.11:0,33,539	0/0:22,0:22:54.09:0,54,537	0/0:10,0:10:27.06:0,27,274	0/0:19,0:19:57.19:0,57,930	0/0:16,0:16:48.16:0,48,768	0/0:20,0:20:57.19:0,57,930	0/0:13,0:13:36.12:0,36,580	0/0:14,0:14:42.11:0,42,643	0/0:26,0:26:78.27:0,78,1269	0/0:13,0:13:39.12:0,39,611	0/0:17,0:17:51.17:0,51,824	0/0:20,0:20:60.20:0,60,979	0/0:2,0:2:6.02:0,6,98	0/0:17,0:17:51.17:0,51,831	0/1:6,17:23:12.37:573,0,12	0/0:27,0:27:78.25:0,78,1246	1/1:3,10:14:27.24:407,27,0
chr10	80329517	.	CA	C	670.50	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.014;DP=626;FS=0.000;HRun=4;HaplotypeScore=89.8520;InbreedingCoeff=0.9972;MQ=90.54;MQ0=0;MQRankSum=-6.725;QD=27.94;ReadPosRankSum=0.409;VQSLOD=2.9300;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,150,2003	0/0:11,0:11:30.10:0,30,420	0/0:27,0:27:56.03:0,56,1058	0/0:22,0:22:60.16:0,60,817	0/0:25,0:25:66.22:0,66,922	0/0:17,0:17:51.17:0,51,714	0/0:16,0:16:45.15:0,45,630	0/0:38,0:38:99:0,108,1512	0/0:31,0:31:90.30:0,90,1258	0/0:33,0:33:90.27:0,90,1215	0/0:16,0:16:48.15:0,48,656	0/0:16,0:16:48.16:0,48,672	0/0:23,0:23:69.22:0,69,949	0/0:22,0:22:63.21:0,63,881	0/0:18,0:18:51.16:0,51,697	0/0:12,0:12:33.11:0,33,461	0/0:23,0:23:66.17:0,66,885	0/0:12,0:12:30.10:0,30,416	0/0:18,0:18:54.18:0,54,744	0/0:29,0:29:78.26:0,78,1092	0/0:28,0:28:81.25:0,81,1116	0/0:28,0:28:84.26:0,84,1148	0/0:26,0:26:75.24:0,75,1032	0/0:18,0:18:54.17:0,54,740	0/0:16,0:16:45.15:0,45,630	1/1:1,16:16:45.14:539,45,0	0/0:25,0:25:75.25:0,75,1047	1/1:0,7:7:21.06:252,21,0
chr10	80329540	.	A	AAGT	1852.46	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.313;DP=599;FS=0.000;HRun=0;HaplotypeScore=115.2146;InbreedingCoeff=0.9972;MQ=86.97;MQ0=0;MQRankSum=-7.814;QD=61.75;ReadPosRankSum=0.457;VQSLOD=5.2105;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1800	0/0:10,0:10:24.08:0,24,424	0/0:24,0:24:69.14:0,69,1110	0/0:18,0:17:48.16:0,48,836	0/0:26,0:26:75.23:0,75,1260	0/0:16,0:16:45.15:0,45,782	0/0:20,0:20:57.18:0,57,977	0/0:32,0:32:96.28:0,96,1586	0/0:29,0:29:84.29:0,84,1467	0/0:31,0:31:93.31:0,93,1615	0/0:19,0:19:54.19:0,54,953	0/0:19,0:19:54.13:0,54,886	0/0:21,0:21:60.20:0,60,1035	0/0:20,0:20:57.20:0,57,1005	0/0:17,0:17:51.17:0,51,900	0/0:12,0:12:33.11:0,33,582	0/0:19,0:19:57.20:0,57,990	0/0:11,0:11:27.09:0,27,457	0/0:19,0:19:51.17:0,51,900	0/0:27,0:27:81.28:0,81,1429	0/0:29,0:29:84.29:0,84,1482	0/0:31,0:31:90.27:0,90,1504	0/0:30,0:30:90.31:0,90,1580	0/0:21,0:21:63.22:0,63,1112	0/0:16,0:16:45.15:0,45,793	1/1:2,20:21:63.22:1438,63,0	0/0:18,0:18:54.18:0,54,951	1/1:0,8:8:24.08:535,24,0
chr10	80329620	.	A	AC	622.46	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.868;DP=531;FS=7.609;HRun=5;HaplotypeScore=54.7901;InbreedingCoeff=0.9779;MQ=94.64;MQ0=0;MQRankSum=-2.678;QD=24.90;ReadPosRankSum=0.145;VQSLOD=2.4244;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.10:0,57,593	0/0:9,0:9:27.07:0,27,290	0/0:34,0:34:80.98:0,81,848	0/0:23,0:23:54.13:0,54,580	0/0:28,0:28:81.17:0,81,853	0/0:22,0:22:63.16:0,63,677	0/0:20,0:20:51.13:0,51,548	0/0:35,0:35:96.21:0,96,1003	0/0:23,0:23:60.12:0,60,635	0/0:19,0:19:51.12:0,51,542	0/0:17,0:17:45.06:0,45,463	0/0:18,0:18:54.12:0,54,572	0/0:18,0:18:51.13:0,51,548	0/0:11,0:11:33.08:0,33,354	0/0:24,0:24:63.16:0,63,677	0/0:16,0:16:48.12:0,48,516	0/0:16,0:16:45.11:0,45,483	0/0:8,0:8:24.06:0,24,258	0/0:26,0:26:66.12:0,66,697	0/0:15,0:15:39.08:0,39,410	0/0:26,0:26:72.17:0,72,767	0/0:14,0:14:42.11:0,42,451	0/0:14,0:14:33.08:0,33,355	0/0:15,0:15:42.11:0,42,451	0/0:9,0:9:27.07:0,27,289	1/1:3,18:21:18.89:583,19,0	0/0:24,0:24:66.14:0,66,697	1/1:0,4:4:12.04:154,12,0
chr10	80332665	.	T	TA	724.82	PASS	AB=1.000;AC=10;AF=0.185;AN=54;BaseQRankSum=8.099;DP=272;FS=2.740;HRun=4;HaplotypeScore=42.2900;InbreedingCoeff=0.5405;MQ=63.44;MQ0=1;MQRankSum=1.264;QD=9.17;ReadPosRankSum=1.761;VQSLOD=0.5947;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.18:0,54,754	0/0:5,0:4:2:0,2,115	0/1:13,0:6:0.60:1,0,67	0/1:13,0:6:33.42:33,0,96	0/0:9,0:8:24.06:0,24,317	1/1:3,14:17:45.02:493,45,0	0/0:6,0:6:18.06:0,18,245	0/0:13,0:13:39.13:0,39,536	0/0:12,0:12:36.12:0,36,504	0/0:12,0:11:33.11:0,33,445	0/0:11,0:11:33.11:0,33,452	0/0:8,0:8:24.08:0,24,335	1/1:1,5:6:14.98:165,15,0	1/1:0,5:5:15.04:173,15,0	0/0:4,0:4:7.97:0,8,91	0/0:8,0:8:18.53:0,19,252	0/0:7,0:7:21.07:0,21,289	0/0:5,0:5:12.04:0,12,164	0/0:11,0:11:27.09:0,27,377	0/0:13,0:12:33.11:0,33,461	./.	0/0:3,0:3:9.03:0,9,126	0/0:9,0:9:27.09:0,27,377	0/0:11,0:11:33.11:0,33,454	0/1:13,0:13:3.63:4,0,311	0/0:14,0:14:42.13:0,42,572	0/1:12,0:12:0.84:1,0,384	0/0:13,0:13:39.13:0,39,540
chr10	80333088	.	ACAGATGT	A	14728.82	PASS	AB=0.729;AC=27;AF=0.482;AN=56;BaseQRankSum=4.042;DP=545;FS=26.153;HRun=0;HaplotypeScore=154.9484;InbreedingCoeff=0.7743;MQ=58.13;MQ0=0;MQRankSum=-15.369;QD=53.56;ReadPosRankSum=3.067;VQSLOD=3.0910;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:54.15:0,54,2077	1/1:0,7:7:15.05:395,15,0	0/0:17,0:12:33.11:0,33,1093	0/0:32,0:31:90.31:0,90,3106	1/1:1,21:22:39.08:1026,39,0	0/0:21,0:21:57.20:0,57,2128	0/0:24,0:24:66.23:0,66,2606	1/1:1,17:18:51.13:1119,51,0	0/0:23,0:23:69.24:0,69,2767	1/1:3,22:25:66.23:1736,66,0	1/1:0,16:16:36.12:947,36,0	0/0:16,0:16:48.16:0,48,1898	0/0:28,0:28:81.25:0,81,2939	0/0:15,0:15:45.15:0,45,1735	1/1:0,25:25:63.22:1658,63,0	1/1:0,17:17:45.15:1184,45,0	0/1:3,5:8:87.82:301,0,88	0/1:5,6:11:63.59:377,0,64	1/1:1,20:20:60.21:1558,60,0	1/1:2,33:35:78.27:2053,78,0	1/1:3,8:11:8.59:237,9,0	0/0:24,0:24:69.24:0,69,2765	0/0:14,0:14:42.14:0,42,1695	0/0:20,0:20:54.17:0,54,2025	1/1:0,10:10:27.09:710,27,0	0/1:23,2:25:85.82:86,0,2447	1/1:1,23:23:50.76:1342,51,0	0/0:14,0:14:42.14:0,42,1310
chr10	80334551	.	TAA	T	6501.14	PASS	AB=0.578;AC=36;AF=0.643;AN=56;BaseQRankSum=6.334;DP=468;FS=9.301;HRun=12;HaplotypeScore=69.0187;InbreedingCoeff=0.7899;MQ=59.51;MQ0=11;MQRankSum=0.005;QD=19.52;ReadPosRankSum=1.397;VQSLOD=3.4906;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,1:18:0.44:0,0,81	1/1:0,3:3:9.02:92,9,0	0/0:16,0:7:20.55:0,21,254	0/0:16,0:6:12.98:0,13,191	1/1:3,18:21:45.06:458,45,0	1/1:0,0:17:43.91:190,44,0	0/0:17,0:18:44.64:0,45,627	1/1:7,24:30:66.09:664,66,0	0/0:19,0:20:50.66:0,51,721	1/1:6,21:27:49.06:598,49,0	1/1:8,15:23:45.07:458,45,0	0/0:6,0:7:20.56:0,21,278	1/1:2,0:13:27.44:119,27,0	0/1:1,0:5:24.46:24,0,34	1/1:0,12:12:27.06:275,27,0	0/1:3,6:9:23.65:162,0,24	1/1:3,19:23:56.84:561,57,0	1/1:7,15:22:39.05:397,39,0	1/1:8,11:17:33.03:335,33,0	1/1:2,21:22:53.99:536,54,0	1/1:0,8:8:21.05:214,21,0	0/0:9,0:9:21.07:0,21,313	0/0:20,0:20:48.13:0,48,670	0/0:10,0:10:21.07:0,21,309	1/1:3,14:17:36.07:365,36,0	1/1:3,0:21:50.65:217,51,0	1/1:4,25:28:72.14:730,72,0	1/1:0,0:10:24.70:107,25,0
chr10	80334955	.	GC	G	1708.70	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.540;DP=628;FS=5.882;HRun=1;HaplotypeScore=71.2841;InbreedingCoeff=0.9983;MQ=62.23;MQ0=2;MQRankSum=0.796;QD=29.46;ReadPosRankSum=-0.237;VQSLOD=2.9988;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.22:0,66,1051	0/0:10,0:10:30.10:0,30,474	0/0:23,0:16:38.68:0,39,665	0/0:23,0:16:48.15:0,48,740	0/0:40,0:40:99:0,120,1918	1/1:0,16:16:48.14:551,48,0	0/0:15,0:15:45.15:0,45,720	0/0:28,0:28:84.28:0,84,1321	0/0:22,0:22:66.22:0,66,1049	0/0:36,0:36:99:0,108,1708	0/0:23,0:23:69.20:0,69,1045	0/0:21,0:21:63.21:0,63,1007	1/1:2,23:25:64.93:736,65,0	1/1:0,17:17:48.14:564,48,0	0/0:19,0:19:57.16:0,57,862	0/0:20,0:19:60.19:0,60,934	0/0:26,0:26:75.24:0,75,1174	0/0:16,0:16:48.16:0,48,754	0/0:22,0:22:66.21:0,66,1026	0/0:34,0:34:99:0,102,1612	0/0:23,0:23:69.22:0,69,1076	0/0:20,0:20:60.19:0,60,935	0/0:27,0:27:81.26:0,81,1255	0/0:7,0:7:21.07:0,21,329	0/0:19,0:19:57.19:0,57,911	0/0:31,0:31:93.32:0,93,1488	0/0:26,0:26:78.27:0,78,1244	0/0:14,0:14:42.14:0,42,671
chr10	80335869	.	G	GA	1270.23	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.445;DP=549;FS=4.888;HRun=7;HaplotypeScore=60.7492;InbreedingCoeff=0.9691;MQ=64.30;MQ0=0;MQRankSum=2.116;QD=24.91;ReadPosRankSum=1.698;VQSLOD=4.4170;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:72.11:0,72,695	0/0:7,0:7:21.03:0,21,203	0/0:9,0:9:21.03:0,21,202	0/0:12,0:12:7.56:0,8,215	0/0:31,0:31:84.11:0,84,804	1/1:4,20:24:60.18:725,60,0	0/0:15,0:15:42.06:0,42,405	0/0:34,0:34:87.09:0,87,830	0/0:23,0:23:57.08:0,57,550	0/0:24,0:24:63.08:0,63,605	0/0:20,0:20:57.07:0,57,544	0/0:13,0:13:33.05:0,33,318	1/1:6,8:14:27.08:325,27,0	1/1:1,12:13:30.09:362,30,0	0/0:15,0:16:38.33:0,38,400	0/0:14,0:14:36.05:0,36,348	0/0:30,0:30:74.94:0,75,703	0/0:19,0:19:51.97:0,52,494	0/0:16,0:16:45.06:0,45,430	0/0:31,0:31:81.11:0,81,775	0/0:17,0:17:42.06:0,42,406	0/0:16,0:16:45.07:0,45,435	0/0:23,0:23:54.05:0,54,515	0/0:18,0:18:40.86:0,41,376	0/0:15,0:15:39.06:0,39,377	0/0:33,0:32:93.11:0,93,889	0/0:20,0:20:51.06:0,51,487	0/0:11,0:11:33.05:0,33,319
chr10	80336093	.	G	GA	1124.40	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=2.408;DP=688;FS=9.608;HRun=6;HaplotypeScore=73.1727;InbreedingCoeff=0.9161;MQ=55.70;MQ0=12;MQRankSum=1.374;QD=28.83;ReadPosRankSum=-0.094;VQSLOD=3.7718;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:93.21:0,93,949	0/0:10,0:10:30.05:0,30,299	./.	0/0:11,0:4:3:0,3,30	0/0:33,0:32:96.17:0,96,958	0/0:28,0:28:81.18:0,81,826	0/0:22,0:20:48.09:0,48,483	0/0:36,0:26:69.13:0,69,688	0/0:24,0:24:63.14:0,63,643	0/0:23,0:23:66.14:0,66,669	0/0:18,0:18:42.08:0,42,422	0/0:22,0:22:57.12:0,57,580	1/1:1,19:20:51.16:641,51,0	1/1:2,17:19:48.15:604,48,0	0/0:20,0:20:57.13:0,57,581	0/0:17,0:17:42.09:0,42,428	0/0:42,0:42:99:0,105,1070	0/0:21,0:21:60.14:0,60,612	0/0:25,0:20:54.11:0,54,545	0/0:33,0:33:96.18:0,96,964	0/0:21,0:21:57.11:0,57,574	0/0:22,0:22:57.13:0,57,582	0/0:25,0:25:72.16:0,72,734	0/0:33,0:33:90.18:0,90,910	0/0:25,0:25:69.16:0,69,704	0/0:36,0:36:99:0,99,1005	0/0:40,0:40:99:0,105,1071	0/0:22,0:21:48.11:0,48,490
chr10	80337095	.	TGATAAGTG	T	3032.37	PASS	AB=0.593;AC=9;AF=0.161;AN=56;BaseQRankSum=9.192;DP=517;FS=53.167;HRun=0;HaplotypeScore=122.5873;InbreedingCoeff=0.8325;MQ=55.33;MQ0=3;MQRankSum=-9.332;QD=50.54;ReadPosRankSum=1.644;VQSLOD=1.5525;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:96.33:0,96,3870	0/0:7,0:7:15.05:0,15,660	0/0:20,0:15:36.12:0,36,1203	0/0:25,0:21:55.43:0,55,2124	0/0:15,0:15:42.14:0,42,1773	1/1:4,13:17:33.11:922,33,0	0/0:11,0:11:30.09:0,30,1213	0/0:27,0:25:60.21:0,60,2559	0/0:18,0:18:36.12:0,36,1584	0/0:27,0:27:78.26:0,78,3240	0/0:20,0:20:54.19:0,54,2271	0/0:11,0:11:26.81:0,27,1056	1/1:1,9:10:24.08:624,24,0	1/1:2,11:13:24.08:671,24,0	0/0:27,0:27:45.15:0,45,1931	0/0:14,0:14:30.10:0,30,1296	0/0:21,0:20:33.07:0,33,1328	0/0:14,0:13:30.10:0,30,1224	0/0:15,0:13:33.11:0,33,1292	0/0:18,0:18:48.16:0,48,2006	0/0:24,0:23:69.24:0,69,2787	0/0:26,0:26:60.14:0,60,2290	0/0:20,0:20:51.16:0,51,1847	0/0:19,0:19:48.16:0,48,1959	0/0:13,0:13:33.11:0,33,1143	0/1:5,11:16:98.61:806,0,99	0/0:24,0:24:63.17:0,63,2579	1/1:1,3:4:6.02:168,6,0
chr10	80337176	.	G	GGGA	3531.61	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=9.113;DP=442;FS=87.998;HRun=0;HaplotypeScore=68.8480;InbreedingCoeff=0.8392;MQ=44.83;MQ0=19;MQRankSum=-8.937;QD=23.86;ReadPosRankSum=-3.169;VQSLOD=-0.2512;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,114,1889	1/1:0,4:2:3.01:70,3,0	0/0:25,0:3:6.02:0,6,89	0/0:44,0:10:17.63:0,18,246	1/1:4,12:13:3.01:52,3,0	0/0:12,0:9:15:0,15,230	0/0:18,0:18:51.10:0,51,810	1/1:7,8:14:30.09:578,30,0	0/0:27,0:26:54.19:0,54,952	1/1:3,11:13:29.92:583,30,0	1/1:3,8:9:15.05:248,15,0	0/0:20,0:20:42.09:0,42,735	0/0:6,0:6:9.03:0,9,158	0/0:13,0:11:21.07:0,21,369	1/1:1,13:15:12.03:252,12,0	1/1:0,4:4:6.02:127,6,0	1/1:0,15:15:24.08:479,24,0	1/1:3,1:3:8.98:101,9,0	1/1:7,6:9:18.03:351,18,0	1/1:0,8:7:15.05:312,15,0	1/1:4,3:6:2.99:57,3,0	0/0:17,0:17:42.14:0,42,704	0/0:17,0:17:42.10:0,42,707	0/0:18,0:18:48.13:0,48,788	1/1:0,10:8:6.02:128,6,0	0/0:18,0:15:45.07:0,45,705	1/1:1,8:9:8.92:195,9,0	0/0:7,0:6:9.03:0,9,158
chr10	80340979	.	G	GA	486.75	PASS	AC=26;AF=1.000;AN=26;DP=34;FS=0.000;HRun=2;HaplotypeScore=10.9338;InbreedingCoeff=-0.1624;MQ=39.48;MQ0=0;QD=18.03;VQSLOD=3.2475;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,2:3:3.01:33,3,0	./.	./.	./.	./.	1/1:0,3:3:8.83:54,9,0	1/1:1,0:1:2.97:20,3,0	1/1:2,3:5:12.04:151,12,0	1/1:1,0:1:3:25,3,0	1/1:1,0:1:3.01:43,3,0	1/1:1,1:2:3.01:34,3,0	./.	1/1:1,0:1:3.01:42,3,0	./.	1/1:1,2:3:3.01:31,3,0	./.	1/1:1,0:1:3.01:41,3,0	./.	1/1:1,1:1:2.98:21,3,0	./.	./.	./.	./.	./.	./.	1/1:0,1:1:2.97:20,3,0	1/1:1,2:3:3.01:42,3,0	./.
chr10	80341049	.	TA	T	3565.11	PASS	AB=0.538;AC=37;AF=0.661;AN=56;BaseQRankSum=6.777;DP=184;FS=13.406;HRun=8;HaplotypeScore=25.3308;InbreedingCoeff=0.7464;MQ=65.03;MQ0=0;MQRankSum=-0.892;QD=25.83;ReadPosRankSum=3.603;VQSLOD=2.4575;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:32.93:0,33,375	1/1:0,2:2:6.01:58,6,0	0/0:9,0:8:18.03:0,18,219	0/0:9,0:3:9.03:0,9,108	1/1:1,6:7:18.03:174,18,0	1/1:1,7:8:18.02:174,18,0	0/0:2,0:2:3.01:0,3,36	1/1:2,7:9:21.03:203,21,0	0/0:4,0:4:12.04:0,12,144	1/1:0,4:4:12.02:116,12,0	1/1:0,9:9:27.04:261,27,0	0/0:2,0:2:6.02:0,6,72	1/1:0,6:6:18.03:174,18,0	1/1:0,3:3:6.01:58,6,0	1/1:1,5:6:15.02:145,15,0	0/1:1,6:7:14.60:153,0,15	1/1:0,9:9:21.03:203,21,0	1/1:0,9:9:27.04:261,27,0	1/1:1,3:4:9.01:87,9,0	1/1:0,4:4:12.02:116,12,0	1/1:0,7:7:18.03:174,18,0	0/0:2,0:2:6.02:0,6,72	0/0:3,0:3:9.03:0,9,109	0/0:1,0:1:3.01:0,3,36	1/1:0,4:4:12.02:116,12,0	1/1:0,15:15:45.06:429,45,0	1/1:1,11:12:33.05:319,33,0	1/1:1,12:12:36.06:348,36,0
chr10	80341238	.	TG	T	993.07	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=6.795;DP=324;FS=5.145;HRun=2;HaplotypeScore=38.8952;InbreedingCoeff=0.7662;MQ=80.75;MQ0=0;MQRankSum=1.191;QD=34.24;ReadPosRankSum=2.297;VQSLOD=3.4135;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.21:0,66,969	./.	0/0:26,0:26:75.21:0,75,1058	0/0:22,0:21:60.11:0,60,800	0/0:1,0:1:3.01:0,3,45	1/1:0,4:4:12.04:156,12,0	0/0:11,0:11:33.09:0,33,474	0/0:15,0:15:45.15:0,45,670	0/0:13,0:13:39.13:0,39,585	0/0:4,0:4:12.04:0,12,172	0/0:3,0:3:6.02:0,6,89	0/0:12,0:12:36.11:0,36,520	1/1:0,10:10:30.10:389,30,0	1/1:0,15:15:45.15:584,45,0	0/0:7,0:7:21.07:0,21,315	0/0:13,0:13:39.13:0,39,583	0/0:23,0:23:69.23:0,69,1034	0/0:5,0:5:15.05:0,15,225	0/0:16,0:16:48.15:0,48,693	0/0:1,0:1:3.01:0,3,45	0/0:21,0:21:63.21:0,63,936	0/0:2,0:2:6.02:0,6,90	0/0:2,0:2:6.02:0,6,90	0/0:23,0:23:69.21:0,69,994	0/0:4,0:4:12.01:0,12,139	0/0:23,0:23:66.22:0,66,990	0/0:14,0:14:42.14:0,42,629	0/0:8,0:8:24.08:0,24,360
chr10	80341304	.	CG	C	758.06	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.629;DP=329;FS=18.319;HRun=5;HaplotypeScore=38.1163;InbreedingCoeff=0.8420;MQ=89.46;MQ0=0;MQRankSum=-3.592;QD=22.30;ReadPosRankSum=2.241;VQSLOD=1.8437;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.23:0,72,966	0/0:2,0:2:6.02:0,6,82	0/0:19,0:19:51.15:0,51,673	0/0:23,0:23:63.19:0,63,829	0/0:13,0:13:33.07:0,33,401	0/0:4,0:4:12.04:0,12,164	0/0:10,0:10:30.09:0,30,390	0/0:13,0:13:30.10:0,30,410	0/0:14,0:14:39.10:0,39,499	0/0:5,0:5:12.04:0,12,163	0/0:6,0:6:15.04:0,15,189	0/0:6,0:6:15.05:0,15,205	0/0:15,0:15:39.13:0,39,531	0/0:11,0:11:30.10:0,30,409	0/0:10,0:10:27.09:0,27,369	0/0:14,0:14:39.10:0,39,499	0/0:17,0:17:48.16:0,48,654	0/0:3,0:3:9.03:0,9,123	0/0:15,0:15:42.13:0,42,558	0/0:4,0:4:12.03:0,12,147	0/0:22,0:22:60.15:0,60,778	0/0:10,0:10:27.07:0,27,342	0/0:6,0:6:15.05:0,15,205	0/0:8,0:8:21.07:0,21,287	0/0:10,0:10:30.10:0,30,409	1/1:4,18:22:11.91:534,12,0	0/0:10,0:10:27.09:0,27,369	1/1:0,12:12:30.09:340,30,0
chr10	80341770	.	TA	T	729.41	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.074;DP=319;FS=10.772;HRun=9;HaplotypeScore=37.4282;InbreedingCoeff=0.9110;MQ=77.29;MQ0=0;MQRankSum=-0.010;QD=21.45;ReadPosRankSum=-0.238;VQSLOD=3.2065;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.19:0,69,786	0/0:5,0:5:12.04:0,12,139	0/0:20,0:11:20.85:0,21,179	0/0:13,0:11:11.81:0,12,138	0/0:12,0:12:36.11:0,36,415	0/0:0,0:5:11.36:0,11,58	0/0:13,0:13:39.12:0,39,450	0/0:17,0:17:45.12:0,45,511	0/0:12,0:12:27.07:0,27,303	0/0:12,0:12:33.10:0,33,381	0/0:8,0:8:18.05:0,18,208	0/0:10,0:10:21.06:0,21,242	0/0:0,0:10:22.73:0,23,115	0/0:0,0:5:14.20:0,14,72	0/0:6,0:6:15.04:0,15,173	0/0:9,0:9:21.06:0,21,242	0/0:11,0:11:24.07:0,24,277	0/0:11,0:11:30.05:0,30,331	0/0:16,0:16:39.10:0,39,440	0/0:13,0:13:30.09:0,30,346	0/0:8,0:8:18.05:0,18,208	0/0:9,0:9:24.07:0,24,277	0/0:9,0:9:24.06:0,24,269	0/0:10,0:10:27.08:0,27,312	0/0:9,0:9:21.05:0,21,233	1/1:3,19:22:57.03:521,57,0	0/0:9,0:8:18.05:0,18,208	1/1:0,12:12:36.02:329,36,0
chr10	80341916	.	G	GAAC	488.89	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=0.391;DP=169;FS=5.228;HRun=0;HaplotypeScore=33.1471;InbreedingCoeff=0.7639;MQ=80.38;MQ0=0;MQRankSum=-5.316;QD=32.59;ReadPosRankSum=-3.489;VQSLOD=2.1080;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:30.08:0,30,463	./.	0/0:14,0:14:36.11:0,36,557	0/0:19,0:18:48.12:0,48,707	0/0:7,0:7:18.06:0,18,294	1/1:2,1:3:6.02:71,6,0	0/0:9,0:9:27.09:0,27,441	0/0:9,0:9:27.09:0,27,441	0/0:7,0:7:18.06:0,18,293	0/0:7,0:7:15.05:0,15,245	0/0:1,0:1:3.01:0,3,49	0/0:3,0:3:9.03:0,9,147	1/1:2,1:3:9.03:121,9,0	1/1:0,3:4:9.03:169,9,0	0/0:4,0:4:9.03:0,9,147	0/0:4,0:4:12.04:0,12,196	0/0:10,0:10:27.09:0,27,421	0/0:7,0:7:18.06:0,18,294	0/0:6,0:6:18.06:0,18,275	0/0:5,0:5:15.05:0,15,245	0/0:12,0:12:36.06:0,36,503	0/0:3,0:3:9.03:0,9,127	0/0:2,0:2:6.02:0,6,98	0/0:6,0:6:18.06:0,18,294	0/0:4,0:4:12.03:0,12,166	1/1:1,3:4:12.04:238,12,0	0/0:5,0:5:15.05:0,15,245	1/1:1,0:1:3.01:36,3,0
chr10	80342454	.	TA	T	9885.15	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=16.591;DP=515;FS=0.000;HRun=2;HaplotypeScore=89.1300;InbreedingCoeff=0.9955;MQ=86.71;MQ0=0;MQRankSum=-5.626;QD=36.08;ReadPosRankSum=1.715;VQSLOD=5.2122;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.19:0,69,1009	1/1:0,5:5:15.05:195,15,0	0/0:13,0:13:39.13:0,39,576	0/0:21,0:21:57.11:0,57,774	1/1:0,30:30:87.28:1129,87,0	0/0:31,0:31:93.30:0,93,1370	0/0:11,0:11:33.11:0,33,495	1/1:0,34:34:96.26:1200,96,0	0/0:18,0:18:54.18:0,54,807	1/1:0,22:22:66.21:857,66,0	1/1:0,22:22:54.18:701,54,0	0/0:14,0:14:42.14:0,42,629	0/0:12,0:12:36.12:0,36,537	0/0:14,0:14:42.14:0,42,630	1/1:1,13:14:39.13:506,39,0	1/1:0,14:14:39.13:506,39,0	1/1:0,17:17:51.17:662,51,0	1/1:2,6:8:17.96:233,18,0	1/1:1,20:21:57.18:740,57,0	1/1:1,19:20:51.17:662,51,0	1/1:0,24:24:69.22:896,69,0	0/0:21,0:21:60.20:0,60,899	0/0:12,0:12:36.12:0,36,540	0/0:6,0:6:18.06:0,18,268	1/1:0,23:23:66.21:857,66,0	0/0:25,1:26:39.30:0,39,1083	1/1:0,20:20:57.19:740,57,0	0/0:18,0:18:54.18:0,54,806
chr10	80342769	.	G	GA	1274.17	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-1.536;DP=391;FS=13.810;HRun=9;HaplotypeScore=67.1011;InbreedingCoeff=0.7942;MQ=64.56;MQ0=3;MQRankSum=-0.487;QD=23.17;ReadPosRankSum=-0.827;VQSLOD=3.0343;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:68.98:0,69,599	0/0:2,0:2:6:0,6,52	0/0:14,0:12:25.97:0,26,206	0/0:10,0:8:0.37:0,0,112	0/0:24,0:24:62.98:0,63,547	1/1:1,13:14:42.06:450,42,0	0/0:11,0:11:7.85:0,8,235	0/0:25,1:27:25.81:0,26,442	0/0:6,0:6:11.98:0,12,104	0/0:17,0:17:38.96:0,39,335	0/0:24,0:24:65.97:0,66,568	0/0:8,0:8:17.97:0,18,153	1/1:1,8:9:21.06:232,21,0	1/1:1,3:4:3.01:33,3,0	0/0:4,0:4:6:0,6,52	0/0:9,0:9:26.99:0,27,234	0/0:20,1:21:8.84:0,9,305	0/0:19,0:19:49.81:0,50,422	0/0:13,0:13:29.98:0,30,258	0/0:23,0:23:62.96:0,63,543	0/0:7,0:7:15:0,15,130	0/0:8,0:8:15:0,15,130	0/0:12,0:12:29.99:0,30,260	0/0:12,0:12:35.99:0,36,313	0/0:12,0:12:26.98:0,27,234	1/1:3,10:13:7.03:306,7,0	0/0:25,0:25:65.97:0,66,569	1/1:1,13:15:38.94:412,39,0
chr10	80343284	.	C	CT	5059.35	PASS	AB=0.625;AC=29;AF=0.518;AN=56;BaseQRankSum=-4.706;DP=451;FS=1.866;HRun=10;HaplotypeScore=58.6861;InbreedingCoeff=0.8788;MQ=63.58;MQ0=2;MQRankSum=-2.249;QD=20.65;ReadPosRankSum=-1.589;VQSLOD=5.2389;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,3:48:29.83:0,30,860	0/1:2,3:5:10.40:84,0,10	0/0:21,0:18:8.08:0,8,170	0/0:13,0:13:9.37:0,9,78	1/1:2,18:20:42.11:448,42,0	1/1:2,5:7:15.51:161,16,0	0/0:11,0:10:23.97:0,24,197	1/1:9,22:30:32.48:530,32,0	0/0:10,0:10:20.97:0,21,172	1/1:6,14:20:33.04:338,33,0	1/1:2,15:17:39.10:415,39,0	0/0:11,0:11:23.95:0,24,197	0/0:3,0:3:2.99:0,3,25	0/0:7,0:7:17.97:0,18,147	1/1:4,10:14:21.05:223,21,0	1/1:1,13:14:11.44:326,11,0	1/1:4,14:18:48.09:496,48,0	1/1:4,13:16:36.98:387,37,0	1/1:6,14:20:42.07:436,42,0	1/1:9,15:24:32.45:530,32,0	1/1:2,9:11:24.06:256,24,0	0/0:11,0:11:20.97:0,21,172	0/0:20,0:20:38.94:0,39,320	0/0:16,0:16:35.94:0,36,295	1/1:4,13:18:26.90:270,27,0	0/0:4,0:14:16.76:0,17,48	1/1:1,8:9:15.04:160,15,0	0/0:2,0:19:34.63:0,35,100
chr10	80343687	.	C	CG	470.93	PASS	AB=0.714;AC=7;AF=0.159;AN=44;BaseQRankSum=0.580;DP=569;FS=21.721;HRun=1;HaplotypeScore=75.5139;InbreedingCoeff=0.5888;MQ=24.43;MQ0=109;MQRankSum=-0.782;QD=9.61;ReadPosRankSum=-0.730;VQSLOD=-0.1833;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:18,0:17:35.99:0,36,446	./.	./.	0/0:41,0:36:69.22:0,69,887	1/1:3,6:6:3.01:45,3,0	0/0:38,0:9:27.01:0,27,312	./.	0/0:25,0:9:9.03:0,9,116	0/0:29,0:21:57.18:0,57,722	0/0:20,0:14:12.04:0,12,155	0/0:24,0:14:23.97:0,24,270	0/1:6,4:6:45.50:46,0,58	1/1:3,11:10:8.99:107,9,0	0/0:17,0:5:12.04:0,12,155	0/0:20,0:14:33.11:0,33,427	0/0:16,0:7:3.01:0,3,39	0/0:24,0:9:12.04:0,12,151	0/0:11,0:2:6.02:0,6,75	0/0:32,0:30:57.14:0,57,710	./.	0/0:34,0:33:45.15:0,45,581	0/0:19,0:18:26.89:0,27,332	0/0:33,0:12:3.01:0,3,39	0/0:24,0:22:36.12:0,36,465	1/1:5,11:10:27.09:399,27,0	0/0:15,0:11:21.04:0,21,252	./.
chr10	80344272	.	A	AT	7988.95	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=14.143;DP=597;FS=1.032;HRun=8;HaplotypeScore=137.6436;InbreedingCoeff=0.9825;MQ=84.94;MQ0=0;MQRankSum=-4.712;QD=27.45;ReadPosRankSum=-0.168;VQSLOD=2.9146;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.04:0,90,819	1/1:1,11:12:33.06:366,33,0	0/0:30,0:30:54:0,54,493	0/0:16,0:16:35.97:0,36,323	1/1:4,24:28:66.19:758,66,0	0/0:33,0:33:93.05:0,93,851	0/0:23,0:23:51.01:0,51,462	1/1:8,25:33:47.71:781,48,0	0/0:23,0:24:71.07:0,71,638	1/1:1,27:28:81.23:924,81,0	1/1:4,16:21:44.96:492,45,0	0/0:14,0:14:36.02:0,36,330	0/0:11,0:11:6.64:0,7,243	0/0:11,0:11:33.02:0,33,302	1/1:5,25:30:72.13:811,72,0	1/1:1,15:15:42.12:485,42,0	1/1:1,13:14:33.10:381,33,0	1/1:3,8:11:24.07:277,24,0	1/1:4,15:19:45.13:519,45,0	1/1:8,24:32:69.16:782,69,0	1/1:0,10:10:27.08:309,27,0	0/0:25,0:25:69.02:0,69,628	0/0:31,0:31:86.99:0,87,780	0/0:18,0:18:48.01:0,48,434	1/1:1,15:16:45.13:519,45,0	0/0:30,1:31:46.29:0,46,662	1/1:1,20:21:51.15:586,51,0	0/0:8,0:8:12:0,12,110
chr10	80345237	.	ATT	A	9453.59	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=10.206;DP=506;FS=6.661;HRun=11;HaplotypeScore=81.9924;InbreedingCoeff=0.9937;MQ=66.42;MQ0=1;MQRankSum=-2.095;QD=25.69;ReadPosRankSum=1.324;VQSLOD=4.7961;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:65.71:0,66,977	1/1:0,9:9:18.04:192,18,0	0/0:17,0:15:20.27:0,20,295	0/0:9,0:7:15.04:0,15,202	1/1:2,18:20:48.10:511,48,0	1/1:3,0:20:46.64:203,47,0	0/0:12,0:12:30.10:0,30,462	1/1:5,23:28:69.12:719,69,0	0/0:11,0:11:30.06:0,30,435	1/1:4,19:23:57.13:607,57,0	1/1:1,29:30:69.14:734,69,0	0/0:18,0:19:56.68:0,57,836	1/1:2,8:10:21.04:224,21,0	1/1:0,9:9:27.07:287,27,0	1/1:3,15:18:45.09:479,45,0	1/1:3,13:16:39.09:415,39,0	1/1:1,14:15:39.10:415,39,0	1/1:1,12:13:30.06:319,30,0	1/1:3,16:18:48.10:502,48,0	1/1:1,33:34:95.83:999,96,0	1/1:3,8:11:24.05:255,24,0	0/0:20,0:20:39.10:0,39,557	0/0:12,0:13:33.58:0,34,491	0/0:8,0:8:24.08:0,24,369	1/1:0,14:14:39.10:415,39,0	1/1:3,22:24:69.16:724,69,0	1/1:2,28:31:69.14:787,69,0	1/1:4,18:22:63.14:666,63,0
chr10	80345250	.	CT	C	943.90	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=6.044;DP=521;FS=20.664;HRun=7;HaplotypeScore=105.5739;InbreedingCoeff=0.8324;MQ=58.89;MQ0=1;MQRankSum=-5.134;QD=16.56;ReadPosRankSum=1.594;VQSLOD=2.3767;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.18:0,69,821	0/0:10,0:10:21.07:0,21,264	0/0:14,0:10:20.43:0,20,228	0/0:9,0:5:11.97:0,12,127	0/0:22,0:22:63.12:0,63,755	0/0:21,0:20:48.15:0,48,602	0/0:11,0:11:30.10:0,30,377	0/0:35,0:35:90.27:0,90,1107	0/0:14,0:14:33.11:0,33,415	0/0:23,0:23:66.19:0,66,801	0/0:30,0:30:78.23:0,78,953	0/0:18,0:18:51.15:0,51,628	0/1:8,0:8:2.44:2,0,205	0/0:9,0:9:27.09:0,27,338	0/0:18,0:17:48.15:0,48,604	0/0:14,0:14:39.12:0,39,491	0/0:17,0:17:45.14:0,45,566	0/0:15,0:15:39.10:0,39,475	0/0:19,0:18:42.13:0,42,517	0/0:37,0:37:99:0,99,1211	0/0:9,0:9:24.06:0,24,288	0/0:18,0:18:42.13:0,42,528	0/0:15,0:15:42.13:0,42,519	0/0:9,0:9:24.08:0,24,302	0/0:17,0:17:48.15:0,48,603	1/1:5,23:27:66.13:670,66,0	0/0:33,0:33:81.24:0,81,1001	1/1:7,14:21:39.07:394,39,0
chr10	80346468	.	ATTG	A	966.32	PASS	AB=0.528;AC=3;AF=0.054;AN=56;BaseQRankSum=6.648;DP=571;FS=0.000;HRun=0;HaplotypeScore=78.7025;InbreedingCoeff=0.6329;MQ=94.10;MQ0=0;MQRankSum=-4.884;QD=38.65;ReadPosRankSum=2.846;VQSLOD=4.6018;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.23:0,66,1472	0/0:14,0:14:42.14:0,42,938	0/0:31,0:31:81.20:0,81,1566	0/0:22,0:22:50.97:0,51,960	0/0:30,0:30:87.30:0,87,1921	0/0:34,0:34:99:0,99,2169	0/0:11,0:11:33.11:0,33,722	0/0:30,0:30:81.28:0,81,1766	0/0:25,0:25:75.26:0,75,1645	0/0:22,0:22:60.21:0,60,1301	0/0:25,0:25:72.24:0,72,1568	0/0:11,0:11:33.11:0,33,737	0/0:16,0:16:45.15:0,45,980	0/0:19,0:19:54.19:0,54,1206	0/0:22,0:22:66.23:0,66,1474	0/0:15,0:15:42.14:0,42,938	0/0:11,0:11:30.10:0,30,670	0/0:6,0:6:15.05:0,15,334	0/0:23,0:23:60.21:0,60,1296	0/0:39,0:39:99:0,117,2613	0/0:23,0:23:69.24:0,69,1522	0/0:19,0:19:54.19:0,54,1205	0/0:20,0:20:57.20:0,57,1257	0/0:19,0:19:57.20:0,57,1274	0/0:13,0:13:39.13:0,39,871	0/1:2,17:19:76.92:776,0,77	0/0:24,0:24:69.24:0,69,1482	1/1:0,6:6:18.06:294,18,0
chr10	80348447	.	ATGTATG	A	501.33	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=2.376;DP=418;FS=0.000;HRun=0;HaplotypeScore=111.6426;InbreedingCoeff=0.3289;MQ=54.74;MQ0=9;MQRankSum=-0.706;QD=3.89;ReadPosRankSum=-1.670;VQSLOD=1.8006;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:26:72.20:0,72,1973	0/0:10,0:10:13.99:0,14,123	0/0:7,0:3:6.02:0,6,82	0/0:4,0:3:2.68:0,3,11	0/0:23,0:23:7.88:0,8,226	1/1:15,0:15:3.01:46,3,0	0/0:14,0:14:33.10:0,33,796	0/0:21,0:20:0.05:0,0,270	0/0:12,0:11:30.09:0,30,790	0/1:17,0:15:9.26:9,0,273	0/0:20,0:20:34.52:0,35,317	0/0:14,0:14:39.12:0,39,1189	1/1:17,0:17:5.15:356,5,0	0/1:15,0:15:0:0,0,0	1/1:2,9:11:9.03:181,9,0	0/0:14,0:14:24.96:0,25,321	0/1:20,0:19:22.56:23,0,259	0/0:4,0:4:6.22:0,6,40	0/1:13,0:12:17.41:17,0,116	0/1:21,0:20:3.06:3,0,170	0/0:15,0:13:12.90:0,13,85	0/0:8,0:8:18.06:0,18,559	0/0:12,0:12:33.10:0,33,820	0/0:20,0:20:53.69:0,54,1575	0/0:19,0:18:39.03:0,39,427	0/0:22,0:21:41.73:0,42,931	0/0:13,0:11:29.24:0,29,281	0/0:7,0:7:9.01:0,9,209
chr10	80348478	.	T	TGTGTGTGA	498.98	PASS	AB=0.960;AC=10;AF=0.192;AN=52;BaseQRankSum=1.160;DP=445;FS=0.000;HRun=0;HaplotypeScore=126.9554;InbreedingCoeff=0.0383;MQ=45.21;MQ0=28;MQRankSum=-1.133;QD=2.90;ReadPosRankSum=-0.490;VQSLOD=1.9461;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:27:99:109,0,135	0/0:5,0:5:4.19:0,4,88	./.	./.	0/0:22,0:22:21.76:0,22,254	0/1:23,0:23:5.89:90,0,6	0/0:21,0:20:25.42:0,25,210	0/0:37,0:32:8.52:0,9,347	0/0:13,0:11:20.51:0,21,275	0/1:22,0:19:37.26:37,0,244	0/1:20,0:18:18.46:18,0,147	0/0:9,0:9:18.01:0,18,263	0/1:9,6:16:7.32:200,0,7	1/1:21,0:21:9.02:109,9,0	0/0:9,0:9:5.78:0,6,32	0/1:10,0:8:7.50:7,0,85	0/0:27,0:24:19.81:0,20,188	0/1:7,0:6:25.78:26,0,60	0/0:15,0:10:26.82:0,27,244	0/1:21,0:19:40.44:40,0,184	0/0:19,0:15:0:0,0,0	0/0:10,0:10:12:0,12,157	0/0:8,0:7:11.69:0,12,143	0/0:23,0:21:48.01:0,48,714	0/0:13,0:12:11.33:0,11,107	0/0:21,0:20:26.53:0,27,303	0/0:16,0:12:28.37:0,28,185	0/0:5,0:5:8.46:0,8,70
chr10	80350002	.	AG	A	1456.33	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.226;DP=539;FS=0.000;HRun=2;HaplotypeScore=68.5148;InbreedingCoeff=0.9879;MQ=91.86;MQ0=0;MQRankSum=-0.964;QD=31.66;ReadPosRankSum=3.038;VQSLOD=3.3865;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,163,2367	0/0:6,0:6:18.06:0,18,270	0/0:20,0:20:60.20:0,60,882	0/0:31,0:31:83.78:0,84,1166	0/0:17,0:17:48.16:0,48,718	1/1:1,17:18:51.16:632,51,0	0/0:22,0:22:66.21:0,66,970	0/0:23,0:23:66.22:0,66,989	0/0:21,0:21:63.20:0,63,924	0/0:14,0:14:39.13:0,39,584	0/0:10,0:10:30.10:0,30,450	0/0:21,0:21:60.19:0,60,879	1/1:0,12:12:36.11:446,36,0	1/1:1,15:16:42.13:521,42,0	0/0:10,0:10:27.09:0,27,404	0/0:22,0:22:66.22:0,66,989	0/0:26,0:26:78.26:0,78,1163	0/0:6,0:6:18.06:0,18,270	0/0:25,0:25:75.22:0,75,1075	0/0:16,0:16:48.15:0,48,700	0/0:37,0:37:99:0,111,1622	0/0:11,0:11:33.10:0,33,474	0/0:12,0:12:36.11:0,36,521	0/0:12,0:12:36.12:0,36,540	0/0:13,0:13:39.13:0,39,585	0/0:25,0:25:75.24:0,75,1105	0/0:32,0:31:93.31:0,93,1389	0/0:5,0:5:15.05:0,15,225
chr10	80350256	.	G	GT	297.71	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.087;DP=234;FS=0.000;HRun=7;HaplotypeScore=41.3999;InbreedingCoeff=0.6799;MQ=65.21;MQ0=2;MQRankSum=-0.983;QD=16.54;ReadPosRankSum=0.492;VQSLOD=2.7747;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:24.02:0,24,224	0/0:7,0:7:17.98:0,18,159	0/0:8,0:4:5.91:0,6,44	0/0:12,0:6:3.04:0,3,93	0/0:16,0:16:46.89:0,47,437	1/1:3,6:9:18.05:208,18,0	0/0:5,0:5:15.02:0,15,144	0/0:27,0:25:57.09:0,57,550	0/0:9,0:9:23.99:0,24,222	0/0:7,0:7:21.02:0,21,197	0/0:3,0:3:8.93:0,9,75	0/0:3,0:3:9.01:0,9,87	1/1:0,4:4:9.03:109,9,0	1/1:1,4:5:9.03:109,9,0	0/0:6,0:6:12.02:0,12,114	0/0:7,0:7:18.03:0,18,172	0/0:17,0:15:39.06:0,39,375	0/0:12,0:12:27.01:0,27,252	0/0:12,0:11:33.04:0,33,314	0/0:7,0:7:21.03:0,21,203	0/0:2,0:2:6.01:0,6,58	0/0:2,0:2:3:0,3,29	0/0:7,0:7:15.02:0,15,145	0/0:2,0:2:3:0,3,29	0/0:9,0:9:24.03:0,24,227	0/0:9,0:9:24.03:0,24,228	0/0:11,0:11:27.02:0,27,253	0/0:5,0:5:12.01:0,12,112
chr10	80350264	.	GTTATTTAT	G	1292.86	PASS	AC=28;AF=0.667;AN=42;BaseQRankSum=0.362;DP=210;FS=1.366;HRun=0;HaplotypeScore=57.5005;InbreedingCoeff=0.4688;MQ=62.39;MQ0=2;MQRankSum=-3.359;QD=9.79;ReadPosRankSum=-0.494;VQSLOD=1.5448;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:9:12.04:0,12,419	1/1:4,2:6:3.01:72,3,0	./.	./.	1/1:13,4:17:6.02:117,6,0	1/1:3,3:6:12.04:238,12,0	0/0:5,0:5:3.01:0,3,100	1/1:23,0:20:5.96:44,6,0	0/0:7,0:7:3.01:0,3,85	1/1:6,1:7:3.01:73,3,0	1/1:2,1:3:3.01:66,3,0	0/0:3,0:3:6.02:0,6,246	0/0:4,0:4:3.01:0,3,123	0/0:3,0:3:6.02:0,6,235	1/1:2,4:6:6.02:149,6,0	1/1:4,4:8:6.02:147,6,0	1/1:11,6:15:3.01:75,3,0	1/1:10,0:10:3.01:75,3,0	./.	./.	./.	./.	0/0:5,0:5:6.02:0,6,222	./.	1/1:7,0:7:3.01:51,3,0	1/1:7,0:7:6.01:101,6,0	1/1:7,3:10:6.02:147,6,0	1/1:3,2:5:3.01:74,3,0
chr10	80350739	.	AG	A	12039.24	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=9.862;DP=497;FS=9.142;HRun=3;HaplotypeScore=50.9284;InbreedingCoeff=0.9969;MQ=90.22;MQ0=0;MQRankSum=-5.433;QD=33.35;ReadPosRankSum=2.731;VQSLOD=4.8827;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:33.11:0,33,474	1/1:0,11:11:33.10:409,33,0	0/0:20,0:20:57.13:0,57,751	0/0:18,0:18:47.89:0,48,577	1/1:0,19:19:56.96:633,57,0	1/1:1,18:19:51.16:632,51,0	0/0:6,0:6:18.06:0,18,259	1/1:0,29:29:87.25:1055,87,0	0/0:12,0:12:36.10:0,36,497	1/1:0,21:21:60.19:744,60,0	1/1:0,30:30:81.14:967,81,0	0/0:14,0:14:42.14:0,42,605	1/1:0,20:20:57.18:706,57,0	1/1:0,10:10:27.08:335,27,0	1/1:0,20:20:57.18:706,57,0	1/1:0,13:13:39.12:483,39,0	1/1:2,13:15:33.04:390,33,0	1/1:0,11:11:30.09:372,30,0	1/1:1,13:14:39.09:458,39,0	1/1:1,39:40:99:1394,114,0	1/1:0,12:12:36.11:446,36,0	0/0:16,0:16:22.67:0,23,581	0/0:27,0:27:78.25:0,78,1104	0/0:12,0:12:36.12:0,36,518	1/1:0,9:9:21.07:260,21,0	1/1:1,23:24:69.19:829,69,0	1/1:1,32:33:75.23:924,75,0	1/1:0,11:11:24.08:297,24,0
chr10	80351075	.	GT	G	15659.54	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=13.113;DP=629;FS=1.057;HRun=3;HaplotypeScore=60.4303;InbreedingCoeff=0.9997;MQ=85.61;MQ0=0;MQRankSum=-6.425;QD=34.34;ReadPosRankSum=2.696;VQSLOD=5.4434;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:45.15:0,45,647	1/1:0,10:10:27.08:335,27,0	0/0:27,0:27:78.19:0,78,1049	0/0:13,0:13:36.11:0,36,456	1/1:0,24:24:69.12:817,69,0	1/1:1,35:36:99:1264,102,0	0/0:12,0:12:36.11:0,36,502	1/1:1,41:42:99:1499,123,0	0/0:24,0:24:72.24:0,72,1036	1/1:2,27:29:78.23:944,78,0	1/1:0,32:32:93.21:1133,93,0	0/0:28,0:28:84.27:0,84,1191	1/1:1,17:18:51.16:632,51,0	1/1:1,20:21:57.18:707,57,0	1/1:0,21:21:57.18:707,57,0	1/1:0,16:16:48.15:595,48,0	1/1:1,22:23:63.20:780,63,0	1/1:1,26:27:69.22:855,69,0	1/1:0,17:17:51.16:632,51,0	1/1:2,32:34:96.30:1190,96,0	1/1:0,23:23:66.21:818,66,0	0/0:22,0:22:66.22:0,66,950	0/0:16,0:16:48.15:0,48,673	0/0:16,0:16:48.16:0,48,690	1/1:0,12:12:30.09:372,30,0	1/1:0,27:27:78.24:966,78,0	1/1:0,25:25:63.20:781,63,0	1/1:0,19:19:51.16:632,51,0
chr10	80351986	.	T	TAC	4264.32	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=4.443;DP=328;FS=56.454;HRun=0;HaplotypeScore=116.7942;InbreedingCoeff=0.7819;MQ=61.82;MQ0=0;MQRankSum=-4.103;QD=15.97;ReadPosRankSum=1.551;VQSLOD=2.5259;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:24.02:0,24,231	1/1:5,0:5:9.05:39,9,0	0/0:9,0:8:3.47:0,3,25	0/0:11,0:10:8.89:0,9,89	1/1:14,0:14:26.39:242,26,0	1/1:17,0:17:27.77:248,28,0	0/0:11,0:11:21.07:0,21,267	1/1:12,19:30:60.01:651,60,0	0/0:4,0:4:12.04:0,12,153	1/1:16,0:16:4.08:453,4,0	1/1:19,0:19:35.19:279,35,0	0/0:3,0:3:6.01:0,6,63	1/1:12,0:12:23.71:232,24,0	1/1:16,0:16:24.04:203,24,0	1/1:9,0:9:14.47:114,14,0	1/1:13,0:13:23.60:207,24,0	1/1:6,0:6:11.68:98,12,0	1/1:5,0:5:3.01:39,3,0	1/1:14,0:14:26.77:273,27,0	1/1:4,15:19:14.31:93,14,0	1/1:8,0:8:8.66:50,9,0	0/0:3,0:3:9.03:0,9,115	0/0:4,0:4:9.03:0,9,114	0/0:6,0:6:12.02:0,12,137	1/1:21,0:21:46.04:414,46,0	1/1:5,16:21:32.98:329,33,0	1/1:15,0:16:35.39:285,35,0	0/1:5,0:5:5.23:15,0,5
chr10	80352001	.	TATATATATATATGTGTGTATATATATATATATATATATA	T	8140.16	PASS	AB=0.864;AC=21;AF=0.389;AN=54;BaseQRankSum=8.198;DP=252;FS=29.233;HRun=0;HaplotypeScore=262.7880;InbreedingCoeff=0.0061;MQ=48.19;MQ0=4;MQRankSum=-7.762;QD=44.97;ReadPosRankSum=7.523;VQSLOD=1.9174;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:27.04:0,27,2067	1/1:2,3:5:6.02:555,6,0	0/0:6,0:3:5.85:0,6,59	0/0:7,0:3:6.02:0,6,70	0/1:11,2:13:12.35:249,0,12	0/1:9,0:14:23.97:915,0,24	0/0:7,0:7:21.05:0,21,875	0/1:19,0:18:11.30:11,0,43	0/0:4,0:4:12.04:0,12,177	0/1:15,1:16:19.68:431,0,20	0/0:12,1:13:10.42:0,10,45	./.	0/0:10,0:10:8.45:0,8,62	0/1:10,0:12:47.02:200,0,47	1/1:4,2:7:1.97:572,2,0	0/1:7,2:9:24.05:514,0,24	0/1:4,1:5:5:279,0,5	0/1:3,1:3:7.45:200,0,7	0/1:11,1:11:21.93:518,0,22	1/1:13,2:15:3.01:272,3,0	0/0:6,0:6:2.66:0,3,12	0/0:3,0:3:9.03:0,9,257	0/0:2,0:2:6.02:0,6,274	0/0:3,0:3:9.03:0,9,157	0/1:14,5:19:29.13:935,0,29	0/1:14,1:15:23.06:240,0,23	1/1:7,6:13:22.42:1662,22,0	1/1:1,2:3:8.95:585,9,0
chr10	80352039	.	TA	T	841.15	PASS	AC=32;AF=0.800;AN=40;BaseQRankSum=1.079;DP=91;FS=0.000;HRun=1;HaplotypeScore=82.2616;InbreedingCoeff=0.4842;MQ=68.91;MQ0=8;MQRankSum=-1.315;QD=16.18;ReadPosRankSum=0.880;VQSLOD=3.6199;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:15.05:0,15,203	1/1:4,0:4:8.84:74,9,0	0/0:6,0:3:5.88:0,6,52	0/0:16,0:4:6.46:0,6,51	1/1:3,0:3:8.82:66,9,0	0/0:7,0:7:6.71:0,7,25	./.	1/1:1,0:1:3.01:40,3,0	./.	1/1:1,2:3:9.03:119,9,0	1/1:1,3:4:5.98:60,6,0	./.	./.	./.	1/1:3,0:3:5.94:41,6,0	1/1:2,0:2:5.87:36,6,0	1/1:1,0:1:2.98:21,3,0	1/1:5,0:3:5.84:60,6,0	1/1:3,0:2:2.35:20,2,0	1/1:3,0:3:5.87:40,6,0	1/1:1,0:1:3.01:39,3,0	./.	./.	./.	1/1:6,1:6:17.65:128,18,0	1/1:1,0:1:3.01:40,3,0	1/1:7,0:7:20.67:153,21,0	1/1:4,0:3:1.54:33,2,0
chr10	80352446	.	GT	G	2545.11	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.391;DP=702;FS=2.907;HRun=1;HaplotypeScore=102.0178;InbreedingCoeff=0.9995;MQ=98.60;MQ0=0;MQRankSum=-3.582;QD=36.36;ReadPosRankSum=2.580;VQSLOD=3.8858;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1914	0/0:9,0:9:27.06:0,27,406	0/0:41,0:41:99:0,123,1933	0/0:32,0:32:96.23:0,96,1418	0/0:33,0:33:99:0,99,1556	1/1:0,26:26:75.25:1049,75,0	0/0:24,0:24:72.25:0,72,1148	0/0:38,0:38:99:0,114,1792	0/0:27,0:27:81.28:0,81,1287	0/0:21,0:21:60.20:0,60,960	0/0:27,0:27:81.28:0,81,1294	0/0:24,0:24:72.25:0,72,1146	1/1:1,18:19:48.15:656,48,0	1/1:1,24:25:72.17:983,72,0	0/0:26,0:26:78.25:0,78,1214	0/0:25,0:25:72.25:0,72,1151	0/0:29,0:28:84.26:0,84,1307	0/0:18,0:18:54.18:0,54,854	0/0:25,0:25:75.26:0,75,1198	0/0:33,0:33:96.31:0,96,1461	0/0:18,0:17:54.18:0,54,850	0/0:31,0:31:93.32:0,93,1486	0/0:16,0:16:48.16:0,48,755	0/0:11,0:11:33.11:0,33,528	0/0:22,0:22:66.20:0,66,1028	0/0:21,0:21:63.21:0,63,1007	0/0:29,0:28:84.29:0,84,1340	0/0:12,0:12:36.12:0,36,564
chr10	80354329	.	CT	C	8928.73	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=12.307;DP=427;FS=1.300;HRun=5;HaplotypeScore=64.4013;InbreedingCoeff=0.9931;MQ=79.37;MQ0=0;MQRankSum=-1.907;QD=29.86;ReadPosRankSum=0.902;VQSLOD=5.4090;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.14:0,48,638	1/1:0,5:5:15.04:170,15,0	0/0:16,0:16:42.13:0,42,544	0/0:13,0:13:33.02:0,33,413	1/1:0,14:14:42.12:475,42,0	1/1:0,17:17:48.14:545,48,0	0/0:10,0:10:30.10:0,30,410	1/1:2,15:17:45.13:511,45,0	0/0:17,0:17:51.13:0,51,662	1/1:0,21:21:60.14:662,60,0	1/1:0,14:14:42.12:476,42,0	0/0:12,0:12:33.11:0,33,451	1/1:4,7:11:18.05:204,18,0	1/1:0,8:8:21.06:238,21,0	1/1:0,23:23:63.18:715,63,0	1/1:2,8:10:21.06:238,21,0	1/1:1,23:24:63.18:714,63,0	1/1:2,10:12:30.09:340,30,0	1/1:4,23:27:69.18:771,69,0	1/1:3,16:19:45.13:510,45,0	1/1:1,7:8:18.05:204,18,0	0/0:13,0:13:36.12:0,36,492	0/0:11,0:11:33.11:0,33,451	0/0:19,0:19:54.13:0,54,700	1/1:0,14:14:39.11:442,39,0	1/1:2,18:20:54.11:588,54,0	1/1:0,27:27:75.21:851,75,0	1/1:0,8:8:24.07:272,24,0
chr10	80354892	.	G	GAAGAGA	5451.06	PASS	AB=0.818;AC=38;AF=0.679;AN=56;BaseQRankSum=4.695;DP=503;FS=3.648;HRun=0;HaplotypeScore=131.1650;InbreedingCoeff=0.8049;MQ=60.09;MQ0=12;MQRankSum=-2.137;QD=17.87;ReadPosRankSum=-2.432;VQSLOD=3.7600;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:34:30.69:0,31,365	1/1:4,0:4:8.99:77,9,0	0/0:30,0:13:13.17:0,13,198	0/0:32,0:9:14.06:0,14,140	1/1:18,0:18:42.90:334,43,0	1/1:29,0:29:61.42:459,61,0	0/0:18,0:18:47.66:0,48,582	1/1:25,0:25:60.68:636,61,0	0/0:20,0:20:59.99:0,60,901	1/1:14,0:14:37.75:356,38,0	1/1:8,0:8:9.89:83,10,0	0/0:21,0:21:55.22:0,55,672	1/1:5,15:22:14.94:265,15,0	1/1:15,1:15:40.72:406,41,0	1/1:17,0:16:32.86:280,33,0	1/1:11,0:11:25.02:262,25,0	1/1:16,0:15:19.03:223,19,0	1/1:24,0:23:58.55:546,59,0	1/1:15,0:14:30.12:266,30,0	1/1:15,0:14:38.91:405,39,0	1/1:13,0:12:20.96:172,21,0	0/0:11,0:13:5.28:0,5,285	0/1:6,0:14:4.70:5,0,90	0/0:20,0:29:64.64:0,65,566	1/1:6,0:5:14.94:123,15,0	0/1:16,0:16:99:230,0,142	1/1:10,0:10:13.18:154,13,0	1/1:11,0:10:23.78:170,24,0
chr10	80354963	.	AT	A	5781.92	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=4.660;DP=331;FS=0.000;HRun=7;HaplotypeScore=50.3658;InbreedingCoeff=0.9427;MQ=76.03;MQ0=0;MQRankSum=-2.154;QD=26.77;ReadPosRankSum=3.655;VQSLOD=5.2758;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:66.10:0,66,804	1/1:1,3:4:9.02:92,9,0	0/0:10,0:8:6.97:0,7,82	0/0:15,0:13:20.42:0,20,151	1/1:0,9:9:21.05:214,21,0	1/1:1,17:18:45.09:458,45,0	0/0:5,0:5:12.04:0,12,150	1/1:5,19:24:57.11:574,57,0	0/0:13,0:13:35.98:0,36,428	1/1:1,6:7:18.04:183,18,0	1/1:0,2:2:6.01:61,6,0	0/0:8,0:8:24.05:0,24,276	1/1:3,3:6:9.02:92,9,0	1/1:0,9:9:26.93:249,27,0	1/1:1,10:11:30.07:305,30,0	1/1:0,11:11:33.08:336,33,0	1/1:1,12:13:36.07:366,36,0	1/1:1,11:12:33.07:335,33,0	1/1:2,14:15:39.04:386,39,0	1/1:0,12:12:36.08:367,36,0	1/1:0,12:12:36.01:352,36,0	0/0:11,0:11:33.11:0,33,412	0/0:9,0:9:21.05:0,21,241	0/0:17,0:17:42.13:0,42,523	1/1:1,10:11:30:292,30,0	1/1:0,17:17:51.12:520,51,0	1/1:1,12:13:36.08:367,36,0	1/1:2,7:9:24.02:235,24,0
chr10	80355033	.	A	AACACACACACACAC	6222.07	PASS	AB=0.708;AC=35;AF=0.625;AN=56;BaseQRankSum=6.251;DP=395;FS=0.602;HRun=0;HaplotypeScore=165.3623;InbreedingCoeff=0.8132;MQ=52.04;MQ0=4;MQRankSum=-8.713;QD=26.25;ReadPosRankSum=-3.675;VQSLOD=2.6926;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:48.15:0,48,1509	1/1:2,0:6:6.02:127,6,0	0/0:36,0:21:25.60:0,26,723	0/0:24,0:14:14.27:0,14,349	1/1:9,0:11:20.99:302,21,0	1/1:13,0:22:35.90:585,36,0	0/0:13,0:13:27.06:0,27,715	1/1:16,0:35:62.94:998,63,0	0/0:10,0:10:24.08:0,24,889	1/1:12,0:15:30.10:688,30,0	1/1:8,0:11:26.94:314,27,0	0/0:7,0:7:18:0,18,372	1/1:3,1:9:3.01:203,3,0	1/1:7,0:7:3:25,3,0	1/1:7,0:12:18.04:353,18,0	1/1:0,0:4:3.48:64,3,0	1/1:12,0:16:21.07:446,21,0	1/1:8,0:9:11.95:197,12,0	1/1:12,0:9:11.98:123,12,0	1/1:8,0:16:29.59:574,30,0	1/1:9,0:13:18:269,18,0	0/0:12,0:12:30.06:0,30,711	0/0:9,0:9:18.02:0,18,584	0/0:15,0:15:33.09:0,33,1022	1/1:8,0:13:30.03:437,30,0	0/1:10,0:17:83.47:215,0,83	1/1:3,0:6:17.97:304,18,0	0/0:2,0:6:11.70:0,12,68
chr10	80355084	.	AT	A	263.14	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-2.376;DP=272;FS=1.569;HRun=4;HaplotypeScore=60.1438;InbreedingCoeff=0.5835;MQ=65.09;MQ0=0;MQRankSum=1.559;QD=17.54;ReadPosRankSum=0.038;VQSLOD=3.0022;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:54.17:0,54,733	0/0:7,0:7:18.06:0,18,250	0/0:9,0:8:19.88:0,20,217	0/1:4,0:3:1.60:2,0,30	0/0:11,0:11:27.09:0,27,375	0/0:15,0:15:39.13:0,39,541	0/0:7,0:7:21.07:0,21,292	0/0:23,0:22:63.18:0,63,843	0/0:8,0:8:21.07:0,21,290	0/0:11,0:11:30.06:0,30,394	0/0:14,0:14:42.14:0,42,583	0/0:4,0:4:12.04:0,12,167	0/0:6,0:6:9.03:0,9,125	0/0:3,0:3:9.03:0,9,125	0/0:6,0:6:12.03:0,12,150	0/0:9,0:9:15.04:0,15,195	0/0:15,0:15:39.13:0,39,538	0/0:6,0:6:18.06:0,18,250	0/0:9,0:8:21.04:0,21,272	0/0:12,0:12:30.06:0,30,382	0/0:11,0:11:24.05:0,24,309	1/1:0,11:11:32.93:357,33,0	0/0:6,0:6:15.01:0,15,187	0/0:10,0:10:30.07:0,30,381	0/0:13,0:13:30.09:0,30,403	0/0:12,0:12:36.12:0,36,501	0/0:4,0:4:9.01:0,9,107	0/0:3,0:3:9.03:0,9,125
chr10	80356217	.	GA	G	530.46	PASS	AB=0.900;AC=23;AF=0.821;AN=28;BaseQRankSum=-2.417;DP=55;FS=25.281;HRun=3;HaplotypeScore=15.2779;InbreedingCoeff=0.0784;MQ=110.76;MQ0=1;MQRankSum=-3.057;QD=16.07;ReadPosRankSum=0.284;VQSLOD=1.4507;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:4:8.99:94,9,0	./.	0/1:8,1:6:24.92:25,0,76	0/0:13,0:5:3.73:0,4,33	0/0:0,1:1:0:0,0,0	1/1:0,1:1:3.01:37,3,0	1/1:1,1:2:3.01:37,3,0	1/1:1,6:6:15:168,15,0	./.	1/1:0,1:1:3.01:37,3,0	1/1:0,2:2:3.01:37,3,0	./.	1/1:0,1:1:3.01:37,3,0	./.	./.	1/1:0,1:1:3.01:37,3,0	./.	./.	1/1:1,1:1:3.01:37,3,0	./.	1/1:0,2:2:3.01:37,3,0	./.	./.	./.	1/1:0,1:1:3.01:37,3,0	./.	./.	./.
chr10	80356346	.	T	TA	498.94	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-4.974;DP=174;FS=0.000;HRun=7;HaplotypeScore=20.7078;InbreedingCoeff=0.6259;MQ=88.16;MQ0=0;MQRankSum=0.495;QD=13.48;ReadPosRankSum=0.116;VQSLOD=1.1362;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:6:8.15:0,8,24	0/0:2,0:2:6.01:0,6,58	0/0:15,0:10:13.31:0,13,111	0/1:11,0:9:23.21:23,0,25	0/0:8,0:8:18.03:0,18,173	1/1:1,7:8:12.04:145,12,0	0/0:3,0:3:9.01:0,9,87	0/0:28,0:28:69.11:0,69,666	0/0:4,0:4:12.02:0,12,116	0/0:4,0:4:12.02:0,12,116	0/0:8,0:8:24.04:0,24,232	0/0:4,0:4:9.01:0,9,87	1/1:1,2:3:6.02:72,6,0	1/1:0,5:5:9.03:109,9,0	0/0:3,0:3:9.01:0,9,87	0/0:2,0:2:3:0,3,29	0/0:6,0:6:12.02:0,12,116	0/0:12,0:12:27.02:0,27,254	0/0:8,0:8:24.04:0,24,232	0/0:4,0:4:12.02:0,12,116	0/0:5,0:5:9.01:0,9,87	0/0:2,0:2:6.01:0,6,58	0/0:4,0:4:12.02:0,12,116	0/0:1,0:1:3:0,3,29	0/0:4,0:4:12.02:0,12,116	1/1:1,2:3:8.97:91,9,0	0/0:4,0:4:9.01:0,9,87	1/1:0,6:6:18.06:217,18,0
chr10	80357253	.	C	CA	15306.61	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=7.344;DP=554;FS=0.679;HRun=2;HaplotypeScore=71.2283;InbreedingCoeff=0.9813;MQ=104.51;MQ0=0;MQRankSum=-6.410;QD=45.69;ReadPosRankSum=2.563;VQSLOD=4.1614;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.23:0,69,965	1/1:0,3:3:9.03:144,9,0	0/0:38,0:38:99:0,108,1507	0/0:31,0:31:87.26:0,87,1144	1/1:0,17:17:51.11:785,51,0	1/1:0,15:15:45.15:719,45,0	0/0:25,0:24:75.25:0,75,1049	1/1:0,27:27:81.28:1295,81,0	0/0:18,0:18:54.16:0,54,722	1/1:0,28:28:84.27:1316,84,0	1/1:0,17:17:48.16:767,48,0	0/0:28,0:28:84.27:0,84,1158	1/1:0,24:24:66.23:1054,66,0	1/1:1,19:20:51.17:813,51,0	1/1:0,22:22:63.21:1007,63,0	1/1:0,16:16:48.16:767,48,0	1/1:0,16:16:48.16:767,48,0	1/1:1,8:9:21.07:335,21,0	1/1:0,16:16:48.15:744,48,0	1/1:0,17:17:45.15:719,45,0	1/1:0,21:21:63.21:1007,63,0	0/0:13,0:13:39.13:0,39,545	0/0:25,0:25:75.25:0,75,1047	0/0:18,0:18:54.11:0,54,731	1/1:0,12:12:36.12:575,36,0	1/1:0,19:19:57.19:911,57,0	1/1:0,33:33:90.31:1438,90,0	1/1:0,3:3:9.03:144,9,0
chr10	80357992	.	T	TTTAC	2316.76	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=5.665;DP=226;FS=2.060;HRun=0;HaplotypeScore=43.1558;InbreedingCoeff=0.1336;MQ=54.95;MQ0=2;MQRankSum=-1.137;QD=16.79;ReadPosRankSum=5.470;VQSLOD=2.9456;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:16.89:0,17,127	1/1:4,0:4:8.05:74,8,0	0/0:7,0:2:6.01:0,6,60	0/0:5,0:4:9.02:0,9,98	0/1:17,0:17:14.93:15,0,97	1/1:1,13:14:18.06:454,18,0	0/0:4,0:4:9.03:0,9,170	0/0:21,0:20:41.73:0,42,401	0/0:2,0:2:6.01:0,6,84	0/1:7,0:7:25.29:25,0,34	0/1:7,0:7:7.49:91,0,7	0/0:3,0:3:6:0,6,52	1/1:6,0:6:16.22:125,16,0	0/1:8,0:8:34.07:158,0,34	0/0:5,0:5:11.99:0,12,100	0/0:8,0:8:16.76:0,17,136	0/1:10,0:10:35.90:57,0,36	0/0:16,0:16:3.70:0,4,206	0/1:15,0:15:99:151,0,161	0/1:7,0:7:27.58:28,0,29	0/0:1,0:1:2.99:0,3,24	0/0:1,0:1:0.89:0,1,2	0/0:3,0:3:6.01:0,6,82	0/0:1,0:1:3.01:0,3,57	0/1:4,0:4:32.96:51,0,33	1/1:1,17:19:54.07:974,54,0	0/1:12,0:12:39.87:57,0,40	1/1:1,7:8:9.03:228,9,0
chr10	80358002	.	T	TATTTATTC	6134.17	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=-1.970;DP=274;FS=6.070;HRun=0;HaplotypeScore=64.8185;InbreedingCoeff=0.6602;MQ=66.67;MQ0=1;MQRankSum=-0.593;QD=25.67;ReadPosRankSum=1.008;VQSLOD=3.3277;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:10:61.82:110,0,62	1/1:0,4:5:6.02:264,6,0	0/0:7,0:4:9.02:0,9,96	0/0:5,0:5:12.01:0,12,121	1/1:1,13:22:41.27:366,41,0	1/1:14,0:14:0.06:181,0,0	0/0:4,0:4:12.03:0,12,282	1/1:6,0:28:49.78:620,50,0	0/0:4,0:4:12.01:0,12,128	1/1:0,4:8:20.89:266,21,0	1/1:0,6:9:20.75:403,21,0	0/0:5,0:5:12:0,12,106	1/1:7,0:7:17.99:248,18,0	1/1:6,0:8:21.02:418,21,0	1/1:7,0:7:20.98:175,21,0	1/1:13,0:13:38.76:300,39,0	1/1:2,8:17:6.02:264,6,0	1/1:17,0:17:26.32:210,26,0	1/1:3,17:22:56.93:962,57,0	1/1:0,4:6:11.87:189,12,0	1/1:2,0:2:5.99:50,6,0	0/0:2,0:2:2.98:0,3,21	0/0:5,0:5:15.02:0,15,193	0/0:3,0:3:9.01:0,9,138	1/1:4,0:5:14.96:277,15,0	1/1:17,0:17:51.05:495,51,0	1/1:0,13:15:5.68:263,6,0	0/1:5,0:5:11.96:74,0,12
chr10	80358682	.	AT	A	395.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.209;DP=569;FS=3.516;HRun=7;HaplotypeScore=78.4242;InbreedingCoeff=0.8480;MQ=64.60;MQ0=0;MQRankSum=-0.135;QD=20.79;ReadPosRankSum=1.477;VQSLOD=3.4647;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:48.11:490,48,0	0/0:13,0:13:39.12:0,39,489	0/0:7,0:8:23.82:0,24,222	0/0:2,0:2:2.98:0,3,22	0/0:35,0:35:96.29:0,96,1193	0/0:25,0:25:60.18:0,60,741	0/0:15,0:15:42.13:0,42,528	0/0:33,0:33:93.29:0,93,1153	0/0:17,0:17:42.13:0,42,527	0/0:30,0:30:87.27:0,87,1081	0/0:29,0:29:81.26:0,81,1018	0/0:19,0:19:57.18:0,57,714	0/0:20,0:20:57.18:0,57,717	0/0:13,0:13:39.12:0,39,490	0/0:24,0:24:66.21:0,66,829	0/0:30,0:30:84.27:0,84,1056	0/0:20,0:20:51.15:0,51,626	0/0:17,1:18:45.08:0,45,532	0/0:27,0:27:75.23:0,75,930	0/0:29,0:29:87.28:0,87,1093	0/0:12,0:12:36.11:0,36,450	0/0:18,0:18:51.15:0,51,628	0/0:18,0:18:51.16:0,51,638	0/0:17,0:17:45.14:0,45,566	0/0:21,0:21:54.17:0,54,679	0/0:28,0:28:81.25:0,81,1006	0/0:20,0:20:54.17:0,54,676	0/0:9,0:9:24.08:0,24,302
chr10	80358721	.	AT	A	11711.13	PASS	AB=0.920;AC=39;AF=0.696;AN=56;BaseQRankSum=9.627;DP=645;FS=1.104;HRun=8;HaplotypeScore=78.5605;InbreedingCoeff=0.9115;MQ=81.53;MQ0=0;MQRankSum=-3.729;QD=24.50;ReadPosRankSum=2.771;VQSLOD=5.6024;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.20:0,72,849	1/1:0,7:7:21.03:203,21,0	0/1:21,2:23:26.46:26,0,416	0/0:17,0:17:25.38:0,25,424	1/1:5,26:31:75.11:724,75,0	1/1:0,20:20:51.08:493,51,0	0/0:19,0:19:54.17:0,54,652	1/1:7,25:32:75.11:719,75,0	0/0:14,0:14:33.10:0,33,399	1/1:1,29:30:87.14:840,87,0	1/1:2,30:32:84.13:811,84,0	0/0:17,0:17:45.14:0,45,543	1/1:1,24:25:66.11:637,66,0	1/1:1,15:16:42.07:406,42,0	1/1:1,25:26:69.11:666,69,0	1/1:3,27:30:75.12:724,75,0	1/1:1,18:19:54.08:521,54,0	1/1:0,18:18:51.08:492,51,0	1/1:3,23:26:35.87:630,36,0	1/1:2,35:37:96.14:927,96,0	1/1:1,11:12:33.05:319,33,0	0/0:29,0:29:78.24:0,78,942	0/0:24,2:26:14.26:0,14,739	0/0:19,0:19:39.12:0,39,471	1/1:0,27:27:72.12:695,72,0	1/1:1,29:30:87.12:833,87,0	1/1:0,25:25:75.12:724,75,0	1/1:0,12:12:33.05:319,33,0
chr10	80358876	.	TC	T	11057.94	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=19.300;DP=674;FS=7.507;HRun=1;HaplotypeScore=98.9165;InbreedingCoeff=0.9993;MQ=83.24;MQ0=0;MQRankSum=-0.671;QD=33.11;ReadPosRankSum=1.328;VQSLOD=4.0782;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.23:0,78,1194	1/1:0,9:9:21.07:268,21,0	0/0:17,1:18:29.24:0,29,735	0/0:22,0:22:62.68:0,63,893	1/1:0,36:36:99:1205,99,0	0/0:28,0:28:84.24:0,84,1253	0/0:24,0:24:72.20:0,72,1082	1/1:1,29:30:78.21:897,78,0	0/0:24,0:24:69.23:0,69,1075	1/1:0,29:29:87.21:1025,87,0	1/1:1,27:28:82.34:948,82,0	0/0:26,0:26:78.27:0,78,1246	0/0:31,0:31:93.30:0,93,1460	0/0:27,0:27:81.26:0,81,1251	1/1:3,21:24:70.08:848,70,0	1/1:0,32:32:84.27:1061,84,0	1/1:0,15:15:39.12:489,39,0	1/1:2,14:15:38.51:472,39,0	1/1:2,11:13:36.58:443,37,0	1/1:0,37:37:99:1338,108,0	1/1:3,17:20:58.04:692,58,0	0/0:25,0:25:69.23:0,69,1100	0/0:26,0:26:78.25:0,78,1219	0/0:20,0:20:60.19:0,60,932	1/1:1,21:22:47.83:609,48,0	0/0:28,1:29:49.32:0,49,1260	1/1:0,23:23:60.19:763,60,0	0/0:13,0:13:39.13:0,39,623
chr10	80360212	.	GT	G	8771.50	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=6.518;DP=589;FS=0.360;HRun=10;HaplotypeScore=59.8148;InbreedingCoeff=0.9873;MQ=78.41;MQ0=0;MQRankSum=-1.580;QD=20.83;ReadPosRankSum=2.844;VQSLOD=5.7588;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.13:0,69,735	1/1:0,12:12:32.99:286,33,0	0/0:11,0:11:21.03:0,21,221	0/0:18,0:19:20.41:0,20,350	1/1:7,22:29:65.97:573,66,0	1/1:3,24:27:71.98:625,72,0	0/0:19,0:19:54.15:0,54,597	1/1:8,25:33:44.80:618,45,0	0/0:11,0:11:11.19:0,11,293	1/1:1,23:24:68.99:599,69,0	1/1:3,19:22:50.98:443,51,0	0/0:13,0:13:39.11:0,39,431	1/1:2,13:15:38.99:339,39,0	1/1:1,19:20:53.99:469,54,0	1/1:3,26:29:68.98:599,69,0	1/1:1,17:18:47.99:417,48,0	1/1:7,23:31:62:527,62,0	1/1:1,8:9:23.99:208,24,0	1/1:6,16:22:47.97:417,48,0	1/1:3,28:31:77.97:677,78,0	1/1:4,12:16:32.98:287,33,0	0/0:22,2:24:25.08:0,25,502	0/0:24,0:25:75.02:0,75,801	0/0:18,0:20:47.96:0,48,512	1/1:3,23:26:65.97:573,66,0	1/1:2,21:23:59.96:517,60,0	1/1:5,24:29:56.95:494,57,0	1/1:1,4:5:11.99:104,12,0
chr10	80361571	.	TG	T	8678.03	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=14.656;DP=430;FS=6.454;HRun=1;HaplotypeScore=60.5786;InbreedingCoeff=0.9853;MQ=83.63;MQ0=0;MQRankSum=-2.475;QD=37.90;ReadPosRankSum=-0.317;VQSLOD=5.0302;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:21.07:0,21,327	1/1:0,4:4:12.04:168,12,0	0/0:16,0:16:44.34:0,44,576	0/0:12,1:13:9.71:0,10,311	1/1:0,22:22:57.16:776,57,0	0/0:20,0:20:60.12:0,60,823	0/0:6,0:6:18.06:0,18,282	1/1:0,29:29:87.25:1152,87,0	0/0:18,0:18:54.14:0,54,776	1/1:0,11:11:33.10:445,33,0	1/1:0,25:25:72.15:962,72,0	0/0:18,0:18:54.18:0,54,841	0/0:11,0:11:33.11:0,33,515	0/0:12,0:12:36.11:0,36,539	1/1:0,12:12:30.10:420,30,0	1/1:0,12:12:33.11:461,33,0	1/1:0,12:12:36.12:500,36,0	1/1:0,20:20:51.01:712,51,0	1/1:0,14:14:42.14:587,42,0	1/1:0,25:25:75.22:1028,75,0	1/1:0,8:8:21.07:294,21,0	0/0:17,0:17:51.14:0,51,752	0/0:29,0:29:87.26:0,87,1311	0/0:13,0:12:39.12:0,39,588	1/1:0,19:19:48.16:671,48,0	0/0:15,0:15:42.14:0,42,657	1/1:0,16:16:36.12:503,36,0	0/0:6,0:6:18.06:0,18,281
chr10	80362273	.	AT	A	759.70	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.178;DP=519;FS=9.249;HRun=7;HaplotypeScore=85.0828;InbreedingCoeff=0.9939;MQ=79.81;MQ0=0;MQRankSum=-0.735;QD=18.99;ReadPosRankSum=3.680;VQSLOD=2.7262;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.20:0,66,817	0/0:7,0:7:21.05:0,21,251	0/0:17,0:17:47.81:0,48,566	0/0:15,0:14:31.91:0,32,382	0/0:26,0:26:69.22:0,69,867	0/0:18,0:18:45.13:0,45,554	0/0:14,0:14:42.13:0,42,528	0/0:31,0:31:84.26:0,84,1045	0/0:10,0:10:30.10:0,30,377	0/0:20,0:20:45.14:0,45,564	0/0:19,0:19:51.15:0,51,628	0/0:7,0:7:21.07:0,21,264	0/0:12,0:12:36.10:0,36,440	0/0:17,0:17:42.11:0,42,502	0/0:15,0:15:45.13:0,45,555	0/0:15,0:15:39.12:0,39,491	0/0:22,0:22:64.40:0,64,754	0/0:19,0:19:51.11:0,51,603	0/0:21,0:21:54.16:0,54,657	0/0:29,0:29:78.25:0,78,976	0/0:18,0:18:54.17:0,54,679	0/0:11,0:11:30.10:0,30,377	0/0:21,0:21:60.19:0,60,754	0/0:16,0:16:39.11:0,39,472	0/0:23,0:23:60.18:0,60,744	1/1:4,22:26:25.64:575,26,0	0/0:30,0:30:81.22:0,81,981	1/1:4,10:14:30.06:306,30,0
chr10	80362327	.	CTGTGTG	C	476.21	PASS	AB=0.879;AC=21;AF=0.457;AN=46;BaseQRankSum=4.460;DP=546;FS=1.298;HRun=0;HaplotypeScore=137.9809;InbreedingCoeff=0.5233;MQ=55.63;MQ0=19;MQRankSum=-3.970;QD=2.41;ReadPosRankSum=0.036;VQSLOD=2.2257;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:18.03:0,18,211	1/1:7,0:7:0.47:1,0,0	./.	./.	1/1:23,0:23:2.64:26,3,0	1/1:15,0:15:9.03:125,9,0	0/0:21,0:20:9.18:0,9,286	0/0:22,0:22:0:0,0,0	0/0:14,0:14:12.04:0,12,195	0/0:19,0:19:1.82:0,2,5	0/1:14,0:14:0.03:0,0,0	0/0:11,0:10:8.99:0,9,141	1/1:9,0:11:6.49:84,6,0	1/1:17,0:21:3.01:42,3,0	1/1:15,1:18:9.91:129,10,0	1/1:9,4:12:3.01:60,3,0	0/1:17,5:22:0:0,0,0	0/1:11,3:14:6.04:54,0,6	1/1:12,0:12:3.01:42,3,0	./.	./.	0/0:20,0:19:6.02:0,6,143	0/0:24,0:25:15.03:0,15,210	0/0:18,0:18:33.08:0,33,715	./.	0/0:25,0:24:30.09:0,30,727	1/1:19,4:21:2.79:52,3,0	0/0:9,0:9:3.01:0,3,36
chr10	80362679	.	GTTT	G	10658.82	PASS	AB=0.500;AC=35;AF=0.625;AN=56;BaseQRankSum=3.723;DP=540;FS=15.613;HRun=12;HaplotypeScore=99.6990;InbreedingCoeff=0.9463;MQ=70.40;MQ0=0;MQRankSum=-4.162;QD=27.69;ReadPosRankSum=3.975;VQSLOD=2.3595;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:30.10:0,30,569	1/1:1,9:10:24.06:303,24,0	0/0:15,0:13:27.03:0,27,384	0/0:13,0:12:18:0,18,225	1/1:1,20:22:44.99:531,45,0	1/1:3,20:23:51.12:644,51,0	0/0:12,0:14:33.09:0,33,587	1/1:6,25:31:75.17:946,75,0	0/0:14,0:17:30.09:0,30,784	1/1:3,21:24:63.17:796,63,0	1/1:3,14:17:39.09:493,39,0	0/0:20,0:21:60.18:0,60,1112	1/1:2,19:21:48.15:607,48,0	1/1:1,13:14:39.12:493,39,0	1/1:2,17:20:51.05:624,51,0	1/1:1,19:20:54.16:682,54,0	1/1:3,19:22:54.13:682,54,0	1/1:2,14:16:23.51:474,24,0	1/1:6,13:20:42.02:510,42,0	1/1:7,28:36:76.80:979,77,0	1/1:1,10:12:30.03:359,30,0	0/0:15,0:16:39.08:0,39,676	0/0:20,0:21:58.06:0,58,1044	0/0:11,0:11:30.09:0,30,560	1/1:1,15:16:33.08:417,33,0	0/1:0,1:26:2.20:2,0,41	1/1:3,31:35:90.21:1116,90,0	0/0:0,0:14:12.49:0,12,27
chr10	80362789	.	A	AGG	21063.33	PASS	AB=0.909;AC=35;AF=0.625;AN=56;BaseQRankSum=-2.850;DP=545;FS=0.348;HRun=0;HaplotypeScore=64.1336;InbreedingCoeff=0.9170;MQ=76.50;MQ0=0;MQRankSum=-3.001;QD=52.53;ReadPosRankSum=0.553;VQSLOD=5.5706;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.19:0,57,930	1/1:0,6:6:18.06:366,18,0	0/0:17,0:17:48.14:0,48,722	0/0:6,0:6:12.01:0,12,168	1/1:1,33:34:93.32:1890,93,0	1/1:0,26:27:66.23:1341,66,0	0/0:12,0:12:33.11:0,33,536	1/1:2,29:31:90.31:1810,90,0	0/0:9,0:9:27.09:0,27,441	1/1:1,20:22:66.21:1274,66,0	1/1:1,25:26:63.22:1280,63,0	0/0:17,0:17:51.17:0,51,830	1/1:1,10:11:26.71:548,27,0	1/1:0,15:15:42.14:853,42,0	1/1:0,24:24:69.24:1402,69,0	1/1:1,18:20:54.19:1097,54,0	1/1:0,17:18:48.16:975,48,0	1/1:0,21:21:54.14:1034,54,0	1/1:1,17:19:57.18:1109,57,0	1/1:2,21:23:63.17:1216,63,0	1/1:0,15:15:42.14:847,42,0	0/0:20,0:20:60.20:0,60,979	0/0:24,0:24:72.23:0,72,1151	0/0:13,0:13:30.10:0,30,490	1/1:0,32:32:90.31:1829,90,0	0/1:18,2:20:61.62:62,0,821	1/1:1,35:37:99:2132,105,0	0/0:7,0:7:21.07:0,21,343
chr10	80362948	.	CTTTT	C	10477.44	PASS	AB=0.784;AC=38;AF=0.679;AN=56;BaseQRankSum=6.966;DP=479;FS=7.097;HRun=13;HaplotypeScore=91.2416;InbreedingCoeff=0.8361;MQ=71.55;MQ0=3;MQRankSum=-3.378;QD=27.50;ReadPosRankSum=5.670;VQSLOD=3.6030;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:19:54.15:0,54,1123	1/1:1,6:7:18.06:263,18,0	0/1:28,0:17:1.95:2,0,574	0/0:11,0:6:9.03:0,9,148	1/1:4,22:26:51.09:745,51,0	1/1:2,14:16:39.11:570,39,0	0/0:9,0:10:27.09:0,27,619	1/1:9,18:27:54:731,54,0	0/0:11,0:13:39.13:0,39,819	1/1:4,18:22:54.14:771,54,0	1/1:4,16:20:45.09:657,45,0	0/0:15,0:17:51.17:0,51,1115	1/1:2,13:15:33.10:482,33,0	1/1:4,13:17:33.07:482,33,0	1/1:3,28:31:75.22:1097,75,0	1/1:4,19:23:48.10:702,48,0	1/1:2,14:16:33.07:483,33,0	1/1:0,8:8:21.07:307,21,0	1/1:4,18:22:54.13:766,54,0	1/1:3,19:22:54.14:790,54,0	1/1:4,11:15:28.29:398,28,0	0/0:8,0:9:21.07:0,21,490	0/0:7,0:9:27.08:0,27,530	0/0:8,0:10:30.10:0,30,644	1/1:1,9:10:24.07:351,24,0	0/1:6,1:25:36.27:83,0,36	1/1:5,22:27:54.12:789,54,0	1/1:0,0:4:3.74:10,4,0
chr10	80363669	.	C	CTG	1742.98	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.519;DP=699;FS=1.248;HRun=0;HaplotypeScore=85.4857;InbreedingCoeff=0.9413;MQ=71.14;MQ0=4;MQRankSum=0.344;QD=41.50;ReadPosRankSum=-0.339;VQSLOD=4.7638;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:24.97:0,25,456	0/0:11,0:11:30.10:0,30,375	0/0:39,0:26:45.05:0,45,518	0/0:35,0:25:42.50:0,43,556	0/0:26,0:26:72.22:0,72,888	0/0:30,0:30:84.25:0,84,1027	0/0:20,0:20:25.04:0,25,560	0/0:29,0:29:69.20:0,69,835	0/0:16,0:16:45.14:0,45,563	0/0:33,0:33:75.23:0,75,922	0/0:21,0:21:51.16:0,51,638	0/0:27,0:27:72.22:0,72,887	0/0:20,0:20:48.13:0,48,576	0/0:18,0:18:48.14:0,48,588	0/0:32,0:32:69.19:0,69,838	0/0:19,0:19:45.14:0,45,563	0/0:31,0:31:86.62:0,87,1045	0/0:15,0:15:30.05:0,30,352	0/0:15,0:17:44.76:0,45,502	0/0:34,0:34:90.28:0,90,1114	0/0:34,0:34:87.24:0,87,1057	0/0:22,0:22:57.18:0,57,713	0/0:24,0:24:57.17:0,57,699	0/0:20,0:20:48.15:0,48,600	0/0:22,0:22:60.19:0,60,751	1/1:3,36:39:99:1756,108,0	0/0:37,0:38:99:0,108,1315	1/1:1,2:3:6.02:99,6,0
chr10	80365590	.	T	TTCCAAAATTG	1129.03	PASS	AB=0.652;AC=1;AF=0.018;AN=56;BaseQRankSum=4.914;DP=436;FS=0.000;HRun=0;HaplotypeScore=136.2725;InbreedingCoeff=-0.0199;MQ=78.97;MQ0=0;MQRankSum=-3.751;QD=75.27;ReadPosRankSum=2.663;VQSLOD=3.7382;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.32:0,93,3235	0/0:5,0:5:15.05:0,15,524	0/0:11,0:11:30.07:0,30,897	0/0:13,0:14:30.26:0,30,1106	0/0:20,0:20:57.18:0,57,1854	0/0:12,0:12:36.12:0,36,1208	0/0:15,0:15:39.13:0,39,1277	0/0:35,0:35:99:0,105,3359	0/0:18,0:18:54.19:0,54,1804	0/0:18,0:18:54.19:0,54,1820	0/0:19,0:19:51.18:0,51,1701	0/0:13,0:13:39.13:0,39,1251	0/0:11,0:11:33.11:0,33,1115	0/0:7,0:7:21.07:0,21,699	0/0:13,0:13:39.13:0,39,1319	0/0:15,0:15:45.15:0,45,1570	0/0:24,0:24:72.25:0,72,2387	0/0:12,0:12:27.05:0,27,897	0/0:23,0:23:63.21:0,63,1980	0/0:17,0:17:48.16:0,48,1540	0/0:6,0:6:18.06:0,18,629	0/0:13,0:13:39.11:0,39,1149	0/0:16,0:16:48.10:0,48,1590	0/0:8,0:8:24.08:0,24,829	0/0:19,0:19:57.20:0,57,1835	0/1:7,8:15:99:1203,0,517	0/0:19,0:19:57.16:0,57,1771	0/0:6,0:6:15.04:0,15,219
chr10	80365593	.	A	AGGATTGG	1110	PASS	AB=0.652;AC=3;AF=0.054;AN=56;BaseQRankSum=5.138;DP=437;FS=5.271;HRun=0;HaplotypeScore=106.0836;InbreedingCoeff=0.6229;MQ=80.68;MQ0=0;MQRankSum=-3.980;QD=52.86;ReadPosRankSum=-0.116;VQSLOD=3.0446;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.32:0,93,2564	0/0:6,0:6:18.05:0,18,445	0/0:12,0:12:35.95:0,36,758	0/0:14,0:15:33.26:0,33,815	0/0:19,0:19:57.18:0,57,1445	0/0:12,0:12:33.11:0,33,922	0/0:16,0:16:48.15:0,48,1137	0/0:33,0:33:99:0,99,2527	0/0:17,0:17:51.17:0,51,1387	0/0:18,0:18:54.19:0,54,1458	0/0:19,0:19:54.19:0,54,1363	0/0:11,0:11:33.11:0,33,845	0/0:12,0:12:36.12:0,36,879	0/0:7,0:7:21.07:0,21,544	0/0:15,0:15:45.11:0,45,1049	0/0:15,0:15:45.15:0,45,1248	0/0:23,0:23:69.24:0,69,1797	0/0:15,0:15:33.01:0,33,734	0/0:23,0:23:69.23:0,69,1683	0/0:14,0:14:42.14:0,42,1064	0/0:6,0:6:18.06:0,18,503	0/0:11,0:11:33.10:0,33,817	0/0:16,0:16:45.14:0,45,1233	0/0:9,0:9:24.08:0,24,636	0/0:18,0:18:54.17:0,54,1378	0/1:7,8:15:99:951,0,153	0/0:22,0:22:63.20:0,63,1566	1/1:6,0:6:15.05:261,15,0
chr10	80365709	.	GT	G	1310.88	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.581;DP=438;FS=1.840;HRun=8;HaplotypeScore=47.0067;InbreedingCoeff=0.9640;MQ=83.40;MQ0=0;MQRankSum=-1.821;QD=22.60;ReadPosRankSum=2.330;VQSLOD=4.1501;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:47.45:487,47,0	0/0:3,0:3:9.03:0,9,109	0/0:17,0:16:9.33:0,9,221	0/0:21,0:20:42.01:0,42,451	0/0:22,0:22:63.19:0,63,760	1/1:0,16:17:42.07:405,42,0	0/0:11,0:11:30.08:0,30,350	0/0:27,0:27:60.15:0,60,686	0/0:23,0:23:60.17:0,60,712	0/0:18,0:18:48.15:0,48,576	0/0:16,0:16:42.12:0,42,497	0/0:13,0:13:36.09:0,36,420	1/1:2,9:11:27.04:261,27,0	1/1:0,12:12:33.05:318,33,0	0/0:15,0:15:45.14:0,45,543	0/0:11,0:11:27.07:0,27,314	0/0:12,0:12:36.09:0,36,419	0/0:19,0:19:51.12:0,51,598	0/0:16,0:16:48.13:0,48,559	0/0:16,0:16:48.15:0,48,579	0/0:16,0:16:42.13:0,42,507	0/0:5,0:5:15.05:0,15,181	0/0:14,0:14:39.12:0,39,470	0/0:12,0:12:30.06:0,30,336	0/0:20,0:20:54.16:0,54,641	0/0:24,0:24:69.21:0,69,826	0/0:16,0:16:47.63:0,48,553	0/0:12,0:13:38.99:0,39,448
chr10	80367373	.	A	ATTAT	3568.63	PASS	AB=0.556;AC=11;AF=0.196;AN=56;BaseQRankSum=2.559;DP=382;FS=4.388;HRun=0;HaplotypeScore=73.7211;InbreedingCoeff=0.8245;MQ=75.73;MQ0=0;MQRankSum=-6.597;QD=49.56;ReadPosRankSum=0.539;VQSLOD=4.3571;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,9:12:33.11:774,33,0	0/0:10,0:10:27.09:0,27,485	0/0:14,0:14:36.07:0,36,516	0/0:3,0:3:8.28:0,8,61	0/0:30,0:30:78.24:0,78,1344	1/1:9,10:19:39.13:923,39,0	0/0:5,0:5:12.04:0,12,216	0/0:38,0:38:96.30:0,96,1631	0/0:8,0:8:18.05:0,18,294	0/0:21,0:21:57.06:0,57,908	0/0:14,0:14:36.10:0,36,616	0/0:8,0:8:24.07:0,24,395	1/1:3,3:6:15:276,15,0	1/1:2,4:6:18.02:387,18,0	0/0:10,0:10:30.10:0,30,532	0/0:14,0:14:39.12:0,39,659	0/0:27,0:27:78.25:0,78,1352	0/0:10,0:10:30.02:0,30,445	0/0:16,0:16:48.16:0,48,836	0/0:13,0:13:33.11:0,33,592	0/0:6,0:6:12.04:0,12,207	0/0:6,0:6:15.03:0,15,239	0/0:10,0:10:27.09:0,27,478	0/0:7,0:7:21.03:0,21,325	0/0:15,0:15:45.13:0,45,771	0/1:4,14:19:46.63:1053,0,47	0/0:25,0:25:69.19:0,69,1118	1/1:7,2:9:6.02:156,6,0
chr10	80367412	.	ATGTGTGTGTGAGTGTG	A	4435.59	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.957;DP=508;FS=2.256;HRun=0;HaplotypeScore=211.3620;InbreedingCoeff=0.9726;MQ=67.21;MQ0=9;MQRankSum=-9.422;QD=69.31;ReadPosRankSum=1.393;VQSLOD=4.4938;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,7:11:12.04:348,12,0	0/0:12,0:12:30.10:0,30,1849	0/0:32,0:19:20.77:0,21,1258	0/0:29,0:19:42.28:0,42,1673	0/0:24,0:24:66.21:0,66,4580	1/1:4,21:25:45.15:1861,45,0	0/0:8,0:8:24.08:0,24,1621	0/0:38,0:38:96.32:0,96,5201	0/0:15,0:15:42.14:0,42,3071	0/0:27,0:27:69.24:0,69,4826	0/0:12,0:12:30.10:0,30,2140	0/0:19,0:19:57.20:0,57,3968	1/1:2,13:15:27.09:1234,27,0	1/1:2,11:13:33.04:992,33,0	0/0:17,0:17:51.17:0,51,3564	0/0:16,0:16:42.14:0,42,3106	0/0:25,0:25:66.20:0,66,3861	0/0:18,0:18:39.11:0,39,2336	0/0:25,0:21:60.21:0,60,3417	0/0:12,0:12:30.10:0,30,1852	0/0:13,0:13:39.13:0,39,2585	0/0:12,0:12:36.12:0,36,2566	0/0:12,0:12:30.10:0,30,2272	0/0:17,0:16:48.16:0,48,3421	0/0:14,0:14:39.13:0,39,2931	0/0:15,0:14:42.14:0,42,2456	0/0:28,0:28:81.28:0,81,5585	0/0:4,0:4:9.03:0,9,555
chr10	80367559	.	CAT	C	2419.91	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.915;DP=598;FS=10.197;HRun=0;HaplotypeScore=89.1045;InbreedingCoeff=0.9994;MQ=57.73;MQ0=0;MQRankSum=-5.644;QD=32.27;ReadPosRankSum=3.104;VQSLOD=5.8459;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:51.17:778,51,0	0/0:10,0:10:30.09:0,30,559	0/0:33,0:29:86.59:0,87,1509	0/0:20,0:17:49.41:0,49,914	0/0:22,0:22:60.17:0,60,1132	1/1:0,20:20:41.97:566,42,0	0/0:13,0:13:39.12:0,39,735	0/0:42,0:42:99:0,126,2384	0/0:24,0:24:72.19:0,72,1304	0/0:28,0:27:81.27:0,81,1614	0/0:22,0:22:66.13:0,66,1164	0/0:23,0:23:69.21:0,69,1328	1/1:0,11:12:30.10:479,30,0	1/1:0,21:21:48.16:757,48,0	0/0:29,0:29:87.23:0,87,1549	0/0:19,0:19:54.19:0,54,1071	0/0:28,0:28:50.90:0,51,1512	0/0:25,0:24:75.23:0,75,1440	0/0:19,0:19:57.19:0,57,1113	0/0:17,0:17:51.18:0,51,1035	0/0:29,0:29:87.20:0,87,1551	0/0:15,0:15:39.11:0,39,719	0/0:10,0:10:30.08:0,30,568	0/0:14,0:14:39.13:0,39,758	0/0:22,0:22:66.20:0,66,1267	0/0:28,0:26:75.24:0,75,1447	0/0:21,0:21:63.19:0,63,1192	0/0:10,0:10:30.10:0,30,609
chr10	80368050	.	AT	A	11287.17	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=3.150;DP=571;FS=3.675;HRun=1;HaplotypeScore=61.0076;InbreedingCoeff=0.9979;MQ=58.06;MQ0=2;MQRankSum=3.687;QD=38.13;ReadPosRankSum=2.117;VQSLOD=5.5759;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1581	1/1:0,6:6:18.06:252,18,0	0/0:19,0:8:21.02:0,21,265	0/0:20,0:9:27.07:0,27,388	1/1:0,23:23:65.89:922,66,0	0/0:16,0:16:48.16:0,48,767	0/0:24,0:24:69.22:0,69,1076	1/1:0,24:23:66.22:921,66,0	0/0:15,0:15:45.15:0,45,718	1/1:0,25:25:75.25:1048,75,0	1/1:0,12:12:30.10:419,30,0	0/0:24,0:24:69.19:0,69,1027	0/0:16,0:16:48.16:0,48,765	0/0:12,0:12:33.11:0,33,522	1/1:0,27:27:75.25:1049,75,0	1/1:0,16:16:48.16:671,48,0	1/1:0,25:25:72.24:1007,72,0	1/1:0,22:22:66.22:923,66,0	1/1:1,22:22:57.12:753,57,0	1/1:1,11:12:33.06:430,33,0	1/1:0,35:35:84.28:1174,84,0	0/0:17,0:17:48.16:0,48,733	0/0:12,0:12:33.11:0,33,524	0/0:32,0:32:96.28:0,96,1504	1/1:0,24:24:69.23:965,69,0	0/0:23,0:23:69.24:0,69,1092	1/1:2,20:22:54.18:753,54,0	0/0:10,0:10:30.10:0,30,479
chr10	80370563	.	AGG	A	1747.08	PASS	AB=0.974;AC=8;AF=0.143;AN=56;BaseQRankSum=-1.860;DP=628;FS=1.021;HRun=9;HaplotypeScore=127.4652;InbreedingCoeff=0.7024;MQ=83.10;MQ0=2;MQRankSum=-1.614;QD=15.06;ReadPosRankSum=-0.406;VQSLOD=1.3582;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:26:61.32:0,61,590	0/0:9,0:8:21:0,21,184	0/0:26,0:27:29.42:0,29,489	0/1:17,0:17:14.76:15,0,231	0/0:19,0:19:41.96:0,42,360	1/1:4,26:30:57.15:663,57,0	0/0:18,0:18:51.17:0,51,815	0/0:27,0:27:55.11:0,55,428	0/0:13,0:13:36.11:0,36,546	0/0:31,0:31:83.90:0,84,721	0/0:14,0:14:26.37:0,26,218	0/0:30,0:30:84.21:0,84,1266	1/1:0,21:21:51.15:594,51,0	1/1:2,20:22:51.15:594,51,0	0/0:39,0:38:74.99:0,75,657	0/0:26,0:26:65.96:0,66,571	0/0:8,0:8:21:0,21,184	0/0:8,0:8:20.99:0,21,183	0/0:15,0:15:44.34:0,44,369	0/0:31,0:30:68.90:0,69,589	0/0:26,0:26:74.99:0,75,661	0/0:26,0:26:63.20:0,63,1011	0/0:17,0:17:36.10:0,36,539	0/0:20,0:20:54.12:0,54,781	0/0:26,0:26:68.99:0,69,603	0/0:23,0:23:12.24:0,12,410	0/0:33,0:31:80.98:0,81,707	0/1:25,0:25:35.18:35,0,357
chr10	80371593	.	G	GTTTT	1369.40	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.218;DP=532;FS=4.046;HRun=8;HaplotypeScore=102.8768;InbreedingCoeff=0.9795;MQ=83.49;MQ0=0;MQRankSum=-6.282;QD=52.67;ReadPosRankSum=-0.796;VQSLOD=3.2015;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:45.10:0,45,681	0/0:5,0:5:12.03:0,12,180	0/0:23,0:23:45.09:0,45,634	0/0:15,0:15:36.06:0,36,484	0/0:33,0:33:93.30:0,93,1407	0/0:19,0:19:54.18:0,54,817	0/0:26,0:26:60.13:0,60,908	0/0:24,0:24:57.14:0,57,862	0/0:15,0:15:39.06:0,39,547	0/0:18,0:18:45.12:0,45,678	0/0:17,0:17:51.17:0,51,772	0/0:26,0:26:75.22:0,75,1104	0/0:14,0:14:39.12:0,39,587	0/0:19,0:19:51.13:0,51,772	0/0:19,0:19:51.15:0,51,770	0/0:10,0:10:30.10:0,30,454	0/0:18,0:18:54.16:0,54,793	0/0:13,0:13:30.10:0,30,454	0/0:23,0:23:66.22:0,66,987	0/0:26,0:26:69.21:0,69,1042	0/0:20,0:20:60.20:0,60,907	0/0:22,0:23:60.16:0,60,884	0/0:21,0:21:57.19:0,57,854	0/0:20,0:20:54.18:0,54,816	0/0:17,0:17:48.14:0,48,721	1/1:6,14:20:49.94:1070,50,0	0/0:24,0:24:66.21:0,66,989	1/1:2,4:6:18.06:419,18,0
chr10	80371839	.	AAAAC	A	853.99	PASS	AB=0.558;AC=3;AF=0.054;AN=56;BaseQRankSum=5.414;DP=571;FS=14.002;HRun=0;HaplotypeScore=111.6344;InbreedingCoeff=0.4872;MQ=79.22;MQ0=1;MQRankSum=-2.520;QD=32.85;ReadPosRankSum=1.640;VQSLOD=2.7697;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:87.24:0,87,2091	0/0:8,0:8:21.07:0,21,535	0/0:29,0:26:38.74:0,39,1227	0/0:36,0:30:63.21:0,63,1387	0/0:24,0:24:63.19:0,63,1441	0/0:16,0:15:45.15:0,45,1099	0/0:18,0:18:54.19:0,54,1310	0/0:25,0:25:60.20:0,60,1389	0/0:23,0:23:57.18:0,57,1372	0/0:22,0:22:60.10:0,60,1455	0/0:20,0:20:39.13:0,39,988	0/0:21,0:21:57.20:0,57,1437	0/0:19,0:19:48.15:0,48,1155	0/0:18,0:18:51.10:0,51,1102	0/0:18,0:18:54.18:0,54,1294	0/0:21,0:21:60.19:0,60,1451	0/0:25,0:24:72.22:0,72,1729	0/0:13,0:13:39.13:0,39,959	0/0:19,0:19:44.94:0,45,966	0/0:18,0:18:42.14:0,42,1043	0/0:23,0:23:66.16:0,66,1607	0/0:16,0:16:45.15:0,45,1061	0/0:23,0:23:60.10:0,60,1360	0/0:18,0:18:51.18:0,51,1299	0/0:14,0:14:39.13:0,39,964	0/1:5,19:24:16.06:893,0,16	0/0:22,0:22:63.22:0,63,1513	1/1:2,0:2:3.01:53,3,0
chr10	80371865	.	CCACA	C	520.25	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=-0.494;DP=617;FS=4.171;HRun=0;HaplotypeScore=136.5973;InbreedingCoeff=0.6950;MQ=60.52;MQ0=12;MQRankSum=1.302;QD=14.06;ReadPosRankSum=0.161;VQSLOD=3.2450;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,20:37:29.59:614,30,0	0/0:10,0:11:23.82:0,24,471	0/0:39,0:21:3.01:0,3,71	0/0:37,0:22:0.47:0,0,1	0/0:18,0:19:35.86:0,36,806	0/0:18,0:26:3.48:0,3,53	0/0:21,0:23:37.94:0,38,813	0/0:29,0:29:36.90:0,37,593	0/0:18,0:18:33.11:0,33,784	0/0:23,0:26:62.95:0,63,1284	0/0:16,0:16:24.48:0,24,367	0/0:20,0:21:41.24:0,41,826	0/0:9,0:20:20.56:0,21,322	0/0:10,0:19:27.09:0,27,489	0/0:21,0:22:33.10:0,33,715	0/0:24,0:24:45.14:0,45,975	0/0:24,0:25:38.87:0,39,850	0/0:18,0:18:33.54:0,34,663	0/0:14,0:16:22.62:0,23,430	0/0:16,0:18:26.83:0,27,573	0/0:28,0:29:62.57:0,63,1248	0/0:11,0:18:21.54:0,22,368	0/0:16,0:21:43.81:0,44,687	0/0:21,0:21:47.90:0,48,1070	0/0:9,0:9:21.05:0,21,379	0/0:21,0:24:42.08:0,42,654	0/0:23,0:24:45.10:0,45,939	./.
chr10	80371951	.	AAC	A	4218.38	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.282;DP=644;FS=0.862;HRun=0;HaplotypeScore=108.8011;InbreedingCoeff=0.9882;MQ=90.26;MQ0=0;MQRankSum=-7.675;QD=45.36;ReadPosRankSum=2.487;VQSLOD=6.3246;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,2386	0/0:5,0:5:15.05:0,15,284	0/0:21,0:21:63.22:0,63,1220	0/0:33,0:32:90.30:0,90,1713	0/0:24,0:24:72.25:0,72,1443	1/1:1,21:21:60.20:969,60,0	0/0:24,0:24:72.25:0,72,1393	0/0:36,0:36:99:0,108,2100	0/0:30,0:30:90.31:0,90,1827	0/0:24,0:24:72.23:0,72,1370	0/0:14,0:14:42.14:0,42,853	0/0:28,0:28:84.29:0,84,1632	1/1:0,20:20:60.19:946,60,0	1/1:0,20:21:60.20:972,60,0	0/0:19,0:19:57.20:0,57,1136	0/0:22,0:22:66.23:0,66,1340	0/0:26,0:26:75.26:0,75,1523	0/0:16,0:16:45.15:0,45,903	0/0:20,0:20:60.19:0,60,1163	0/0:18,0:18:54.19:0,54,1096	0/0:35,0:35:99:0,101,1884	0/0:12,0:12:36.12:0,36,730	0/0:25,0:25:75.26:0,75,1466	0/0:23,0:23:69.24:0,69,1382	0/0:29,0:29:87.30:0,87,1762	1/1:1,24:25:14.27:1088,14,0	0/0:23,0:23:69.22:0,69,1364	1/1:0,5:5:15.05:244,15,0
chr10	80371958	.	A	AT	4252.04	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.165;DP=656;FS=0.000;HRun=0;HaplotypeScore=95.0049;InbreedingCoeff=0.9909;MQ=91.94;MQ0=0;MQRankSum=-8.756;QD=44.29;ReadPosRankSum=2.490;VQSLOD=4.8274;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,1593	0/0:4,0:4:12.04:0,12,168	0/0:23,0:23:66.19:0,66,876	0/0:35,0:34:90.22:0,90,1151	0/0:30,0:30:87.29:0,87,1215	1/1:0,20:19:57.19:904,57,0	0/0:23,0:23:66.21:0,66,905	0/0:35,0:35:99:0,105,1447	0/0:32,0:32:93.31:0,93,1300	0/0:23,0:23:63.21:0,63,880	0/0:14,0:14:42.14:0,42,587	0/0:27,0:27:81.27:0,81,1132	1/1:3,18:21:60.19:927,60,0	1/1:4,19:23:66.22:1032,66,0	0/0:18,0:18:54.18:0,54,754	0/0:28,0:28:78.26:0,78,1085	0/0:27,0:27:78.26:0,78,1090	0/0:14,0:14:39.13:0,39,545	0/0:21,0:21:60.20:0,60,838	0/0:21,0:21:54.18:0,54,755	0/0:31,0:31:93.30:0,93,1281	0/0:14,0:14:42.14:0,42,587	0/0:25,0:25:72.24:0,72,1007	0/0:23,0:23:69.23:0,69,964	0/0:28,0:28:84.28:0,84,1175	1/1:2,24:26:33.28:1106,33,0	0/0:23,0:23:69.23:0,69,965	1/1:1,5:6:18.06:284,18,0
chr10	80373291	.	T	TGTCTG	4903.88	PASS	AB=0.844;AC=10;AF=0.179;AN=56;BaseQRankSum=3.905;DP=699;FS=14.779;HRun=0;HaplotypeScore=140.3090;InbreedingCoeff=0.7584;MQ=79.19;MQ0=0;MQRankSum=-9.021;QD=39.55;ReadPosRankSum=-0.982;VQSLOD=4.0365;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:51.10:0,51,881	0/0:15,0:15:33.08:0,33,522	0/0:29,0:27:20.03:0,20,509	0/0:41,0:36:41.50:0,42,727	0/0:19,0:19:30.08:0,30,496	1/1:12,15:27:41.88:1130,42,0	0/0:29,0:29:51.16:0,51,907	0/0:32,0:32:60.18:0,60,1002	0/0:18,0:18:45.15:0,45,809	0/0:24,0:24:54.18:0,54,986	0/0:19,0:19:39.13:0,39,697	0/0:24,0:24:54.19:0,54,1007	1/1:8,18:27:57.20:1580,57,0	1/1:5,19:25:42.14:1182,42,0	0/0:27,0:27:60.15:0,60,1002	0/0:26,0:26:66.22:0,66,1192	0/0:24,0:24:54.17:0,54,979	0/1:9,0:9:7.26:7,0,176	0/0:18,0:18:33.09:0,33,553	0/0:32,0:32:72.24:0,72,1310	0/0:38,0:38:87.14:0,87,1507	0/0:22,0:22:33.11:0,33,591	0/0:23,0:23:48.16:0,48,901	0/0:17,0:17:45.15:0,45,842	0/0:30,0:30:60.15:0,60,1026	0/1:17,12:31:17.31:746,0,17	0/0:38,0:38:99:0,105,1927	1/1:2,3:5:9.03:258,9,0
chr10	80373713	.	T	TTG	3055.58	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=0.082;DP=619;FS=5.422;HRun=0;HaplotypeScore=83.9394;InbreedingCoeff=0.9781;MQ=70.80;MQ0=4;MQRankSum=-2.628;QD=36.38;ReadPosRankSum=2.341;VQSLOD=6.0108;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:60.01:0,60,765	0/0:8,0:8:24.08:0,24,312	0/0:21,0:17:33.06:0,33,408	0/0:32,0:28:61.78:0,62,749	0/0:16,0:16:45.13:0,45,570	1/1:4,20:24:51.17:867,51,0	0/0:21,0:21:54.17:0,54,702	0/0:35,0:35:84.25:0,84,1058	0/0:24,0:24:63.20:0,63,819	0/0:20,0:20:48.15:0,48,613	0/0:15,0:15:36.12:0,36,468	0/0:24,0:24:63.20:0,63,819	1/1:0,22:22:60.21:1020,60,0	1/1:3,10:13:24.08:408,24,0	0/0:21,0:21:51.17:0,51,663	0/0:27,0:27:75.20:0,75,942	0/0:30,0:30:65.95:0,66,851	0/0:19,0:19:48.16:0,48,623	0/0:24,0:24:57.15:0,57,713	0/0:35,0:35:99:0,99,1259	0/0:20,0:20:54.18:0,54,701	0/0:16,0:16:39.13:0,39,507	0/0:16,0:16:45.15:0,45,585	0/0:24,0:24:37.80:0,38,755	0/0:25,0:25:63.19:0,63,805	1/1:3,18:20:12.14:777,12,0	0/0:35,0:35:90.26:0,90,1139	1/1:1,3:4:9.03:153,9,0
chr10	80373744	.	AGT	A	495.71	PASS	AB=0.906;AC=4;AF=0.071;AN=56;BaseQRankSum=4.299;DP=684;FS=2.379;HRun=0;HaplotypeScore=104.4555;InbreedingCoeff=0.4015;MQ=63.93;MQ0=5;MQRankSum=1.184;QD=5.22;ReadPosRankSum=0.411;VQSLOD=2.6055;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,20:28:30.26:527,30,0	0/0:13,0:13:33.11:0,33,533	0/0:41,0:20:19.91:0,20,310	0/0:47,0:32:44.75:0,45,647	0/0:24,0:24:26.94:0,27,880	0/0:28,0:29:44.88:0,45,520	0/0:22,2:24:17.53:0,18,785	0/1:30,3:33:55.24:55,0,632	0/0:28,0:28:78.24:0,78,1207	0/0:18,1:19:9.41:0,9,647	0/0:18,0:18:48.15:0,48,732	0/0:21,1:22:20.99:0,21,813	0/0:29,0:29:78.17:0,78,859	0/0:13,0:13:30.08:0,30,339	0/0:26,0:26:29.70:0,30,978	0/0:25,0:25:72.23:0,72,1127	0/0:22,0:21:48.16:0,48,764	0/0:20,1:21:5.96:0,6,581	0/0:19,0:19:30.05:0,30,414	0/0:30,0:30:81.28:0,81,1292	0/0:22,0:22:57.19:0,57,914	0/0:19,0:19:54.18:0,54,874	0/0:14,0:14:30.08:0,30,458	0/0:30,0:30:66.19:0,66,1014	0/0:24,1:26:26.52:0,27,863	0/0:15,0:23:47.96:0,48,488	0/1:30,4:34:28.71:29,0,1056	0/0:4,0:5:9.43:0,9,71
chr10	80373958	.	ACTGACTT	A	4751.22	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.365;DP=642;FS=4.542;HRun=0;HaplotypeScore=146.6841;InbreedingCoeff=0.9581;MQ=79.97;MQ0=2;MQRankSum=-12.961;QD=60.91;ReadPosRankSum=2.324;VQSLOD=5.1293;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,3838	0/0:11,0:11:33.11:0,33,1293	0/0:22,0:22:54.18:0,54,1842	0/0:11,0:11:33.09:0,33,1099	0/0:23,0:23:63.22:0,63,2467	1/1:5,23:28:60.21:1506,60,0	0/0:25,0:25:69.24:0,69,2639	0/0:33,0:33:90.30:0,90,3358	0/0:31,0:31:84.29:0,84,3257	0/0:25,0:25:72.24:0,72,2730	0/0:24,0:24:69.24:0,69,2641	0/0:28,0:28:78.26:0,78,2965	1/1:4,17:20:51.17:1283,51,0	1/1:0,13:13:39.13:981,39,0	0/0:30,0:30:90.31:0,90,3480	0/0:22,0:22:60.21:0,60,2352	0/0:20,0:20:57.20:0,57,2211	0/0:11,0:11:33.11:0,33,1254	0/0:26,0:26:72.25:0,72,2559	0/0:33,0:33:96.32:0,96,3660	0/0:28,0:28:84.29:0,84,3209	0/0:21,0:21:63.21:0,63,2252	0/0:22,0:22:60.18:0,60,2133	0/0:24,0:24:66.23:0,66,2509	0/0:30,0:30:75.26:0,75,2940	1/1:2,13:14:36.12:906,36,0	0/0:29,0:29:84.29:0,84,3234	1/1:0,1:1:3.01:76,3,0
chr10	80374185	.	T	TA	371.37	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.813;DP=460;FS=26.187;HRun=6;HaplotypeScore=68.4357;InbreedingCoeff=0.8959;MQ=72.98;MQ0=1;MQRankSum=-4.955;QD=18.57;ReadPosRankSum=0.627;VQSLOD=2.0155;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.10:0,45,459	0/0:6,0:6:18.02:0,18,176	0/0:20,0:18:17.23:0,17,301	0/0:10,0:9:20.91:0,21,198	0/0:21,0:21:60.14:0,60,612	1/1:0,5:5:15.04:174,15,0	0/0:16,0:16:45.10:0,45,459	0/0:29,0:29:56.20:0,56,633	0/0:15,0:15:33.07:0,33,336	0/0:23,0:23:54.07:0,54,536	0/0:21,0:21:57.13:0,57,581	0/0:15,0:15:42.07:0,42,417	1/1:2,4:6:12.03:138,12,0	1/1:3,2:5:6.02:69,6,0	0/0:31,0:31:78.17:0,78,790	0/0:16,0:16:33.06:0,33,328	0/0:19,0:19:48.05:0,48,461	0/0:12,0:12:27.03:0,27,266	0/0:18,0:18:45.09:0,45,452	0/0:27,0:27:69.14:0,69,697	0/0:10,0:9:15.03:0,15,153	0/0:18,0:18:54.12:0,54,551	0/0:27,0:27:72.16:0,72,734	0/0:12,0:12:33.07:0,33,336	0/0:31,0:31:69.15:0,69,703	1/1:0,3:3:9.03:108,9,0	0/0:26,0:25:63.14:0,63,642	1/1:0,1:1:3.01:35,3,0
chr10	80374196	.	G	GA	416.71	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.939;DP=461;FS=24.512;HRun=4;HaplotypeScore=84.3158;InbreedingCoeff=0.9019;MQ=75.03;MQ0=0;MQRankSum=-5.102;QD=27.78;ReadPosRankSum=2.413;VQSLOD=1.9651;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:31.05:0,31,481	0/0:9,0:9:21.04:0,21,229	0/0:24,0:22:57.66:0,58,589	0/0:14,0:11:21.87:0,22,222	0/0:22,0:22:60.14:0,60,660	1/1:0,5:5:15.05:187,15,0	0/0:18,0:18:51.14:0,51,570	0/0:24,0:24:57.14:0,57,630	0/0:11,0:11:30.09:0,30,340	0/0:23,0:23:60.16:0,60,674	0/0:23,0:23:63.16:0,63,704	0/0:16,0:16:48.11:0,48,525	1/1:0,4:4:12.04:151,12,0	1/1:0,2:2:6.02:76,6,0	0/0:31,0:31:75.20:0,75,841	0/0:11,0:11:27.08:0,27,306	0/0:20,0:20:51.15:0,51,578	0/0:11,0:11:24.07:0,24,272	0/0:14,0:14:39.11:0,39,442	0/0:29,0:29:78.20:0,78,874	0/0:11,0:10:24.07:0,24,272	0/0:18,0:18:54.15:0,54,612	0/0:27,0:27:69.19:0,69,783	0/0:13,0:13:36.09:0,36,398	0/0:34,0:34:72.19:0,72,808	1/1:0,3:3:9.03:118,9,0	0/0:26,0:25:66.15:0,66,734	1/1:0,1:1:3.01:38,3,0
chr10	80374245	.	GAT	G	8171.86	PASS	AB=0.955;AC=32;AF=0.696;AN=46;BaseQRankSum=10.108;DP=482;FS=0.483;HRun=0;HaplotypeScore=89.8005;InbreedingCoeff=0.7206;MQ=76.12;MQ0=2;MQRankSum=-2.183;QD=22.76;ReadPosRankSum=2.226;VQSLOD=5.2117;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,20:24:42.13:519,42,0	1/1:1,7:8:21.07:260,21,0	0/0:13,0:8:5.36:0,5,29	0/0:24,0:19:1.31:0,1,96	1/1:8,18:26:36.11:446,36,0	./.	0/1:9,1:10:10.10:10,0,366	1/1:8,25:33:75.21:903,75,0	0/1:12,0:12:25.77:26,0,453	1/1:4,20:24:60.18:730,60,0	1/1:1,19:21:50.99:606,51,0	0/0:15,1:16:39.13:0,39,636	./.	./.	1/1:1,27:29:69.22:855,69,0	1/1:2,12:15:26.92:311,27,0	1/1:4,14:19:23.91:274,24,0	1/1:1,15:17:32.93:384,33,0	1/1:5,9:14:27.06:320,27,0	1/1:5,20:25:48.15:592,48,0	1/1:0,19:19:39.12:483,39,0	0/0:15,0:15:30.10:0,30,492	0/0:24,3:27:10.96:0,11,672	0/0:19,0:19:48.16:0,48,787	1/1:4,28:32:57.18:707,57,0	./.	1/1:5,25:30:60.19:744,60,0	./.
chr10	80374528	.	C	CACA	1699.98	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=-7.382;DP=730;FS=11.056;HRun=0;HaplotypeScore=116.8587;InbreedingCoeff=0.9996;MQ=73.89;MQ0=0;MQRankSum=-2.480;QD=58.62;ReadPosRankSum=-1.067;VQSLOD=4.2317;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,1857	0/0:13,0:13:33.09:0,33,512	0/0:28,0:28:72.17:0,72,1039	0/0:16,0:16:41.15:0,41,563	0/0:28,0:28:75.26:0,75,1221	0/0:20,0:20:60.20:0,60,977	0/0:26,0:26:77.72:0,78,1179	0/0:43,0:43:99:0,117,1845	0/0:25,0:25:75.26:0,75,1219	0/0:27,0:27:75.26:0,75,1223	0/0:16,0:16:48.12:0,48,710	0/0:23,0:23:66.23:0,66,1078	0/0:40,0:40:99:0,111,1790	0/0:32,0:32:87.30:0,87,1415	0/0:28,0:28:78.25:0,78,1247	1/1:1,28:29:81.28:1795,81,0	0/0:23,0:23:69.22:0,69,1097	0/0:27,0:27:78.08:0,78,1204	0/0:26,0:26:72.24:0,72,1153	0/0:29,0:29:81.27:0,81,1298	0/0:44,0:44:99:0,126,2054	0/0:14,0:14:39.13:0,39,630	0/0:28,0:28:75.25:0,75,1208	0/0:24,0:24:69.24:0,69,1126	0/0:24,0:24:69.20:0,69,1077	0/0:27,0:27:78.27:0,78,1273	0/0:28,0:28:84.29:0,84,1365	./.
chr10	80375140	.	CA	C	748.86	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.967;DP=478;FS=7.672;HRun=6;HaplotypeScore=54.3817;InbreedingCoeff=0.9778;MQ=73.23;MQ0=0;MQRankSum=-1.032;QD=26.74;ReadPosRankSum=1.311;VQSLOD=4.0045;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:75.18:0,75,965	0/0:11,0:11:33.11:0,33,434	0/0:8,0:8:18:0,18,197	0/0:11,0:10:18.06:0,18,230	0/0:21,0:21:60.19:0,60,787	0/0:16,0:16:48.16:0,48,632	0/0:13,0:13:30.10:0,30,395	0/0:41,0:41:99:0,114,1472	0/0:18,0:18:48.16:0,48,632	0/0:17,0:17:48.15:0,48,621	0/0:20,0:20:57.17:0,57,735	0/0:16,0:16:45.14:0,45,584	0/0:15,0:15:45.15:0,45,592	0/0:15,0:15:42.14:0,42,553	0/0:16,0:16:39.13:0,39,513	0/0:25,0:25:75.24:0,75,985	0/0:11,0:11:33.08:0,33,417	0/0:18,0:18:43.21:0,43,573	0/0:18,0:18:54.17:0,54,692	0/0:21,0:21:60.19:0,60,777	0/0:9,0:9:24.08:0,24,316	0/0:5,0:5:15.05:0,15,197	0/0:11,0:11:33.11:0,33,434	0/0:7,0:7:18.06:0,18,237	0/0:30,0:30:84.26:0,84,1092	1/1:1,16:17:48.12:516,48,0	0/0:27,0:27:72.23:0,72,947	1/1:0,11:11:33.08:354,33,0
chr10	80375293	.	ATC	A	752.08	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=5.479;DP=368;FS=1.688;HRun=0;HaplotypeScore=48.9449;InbreedingCoeff=0.5383;MQ=70.79;MQ0=0;MQRankSum=-0.755;QD=22.12;ReadPosRankSum=2.481;VQSLOD=3.5382;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.18:0,57,952	0/0:7,0:7:18.05:0,18,284	0/0:7,0:6:15.05:0,15,248	0/0:6,0:6:6.02:0,6,87	0/0:22,0:22:63.18:0,63,1031	0/0:20,0:20:29.04:0,29,414	0/0:5,0:5:15.05:0,15,260	0/0:33,0:33:84.26:0,84,1351	0/0:7,0:7:21.07:0,21,364	0/0:15,0:15:39.13:0,39,652	0/0:26,0:26:75.18:0,75,1186	0/0:13,0:13:39.11:0,39,618	0/1:4,0:4:14.76:15,0,49	0/1:5,0:5:11.29:11,0,65	0/0:8,0:8:24.07:0,24,389	0/0:14,0:14:33.09:0,33,517	0/0:17,0:17:45.05:0,45,683	0/0:18,0:18:51.09:0,51,784	0/0:17,0:17:48.12:0,48,706	0/0:15,0:15:45.13:0,45,725	0/0:1,0:1:2.99:0,3,24	0/0:3,0:3:9:0,9,102	0/0:5,0:5:15.05:0,15,260	0/0:5,0:5:12.04:0,12,207	0/0:21,0:21:57.05:0,57,906	1/1:1,15:16:45.11:580,45,0	0/0:29,0:29:78.24:0,78,1288	1/1:2,7:9:21.07:280,21,0
chr10	80376209	.	ATTG	A	3598.23	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.700;DP=704;FS=0.865;HRun=0;HaplotypeScore=123.3801;InbreedingCoeff=0.9634;MQ=73.73;MQ0=0;MQRankSum=-8.478;QD=37.88;ReadPosRankSum=2.810;VQSLOD=4.8083;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,2504	0/0:14,0:14:42.13:0,42,948	0/0:16,0:16:4.30:0,4,580	0/0:12,0:12:30.02:0,30,456	0/0:31,0:31:87.30:0,87,2057	1/1:1,23:24:69.22:901,69,0	0/0:28,0:28:81.28:0,81,1892	0/0:34,0:34:99:0,99,2212	0/0:30,0:30:90.31:0,90,2108	0/0:29,0:29:87.30:0,87,2060	0/0:22,0:22:66.22:0,66,1517	0/0:32,0:32:96.33:0,96,2269	1/1:3,16:19:48.14:604,48,0	1/1:2,17:19:54.16:672,54,0	0/0:33,0:33:96.33:0,96,2270	0/0:32,0:32:93.32:0,93,2160	0/0:25,0:25:75.23:0,75,1724	0/0:8,0:8:24.08:0,24,567	0/0:15,0:15:45.15:0,45,1048	0/0:42,0:42:99:0,123,2890	0/0:34,0:34:99:0,102,2364	0/0:22,0:22:63.22:0,63,1490	0/0:32,0:32:93.32:0,93,2154	0/0:15,0:15:45.15:0,45,1064	0/0:30,0:30:84.27:0,84,1941	1/1:5,20:28:75.21:1172,75,0	0/0:37,0:36:99:0,111,2473	1/1:0,5:5:15.05:249,15,0
chr10	80376214	.	C	CA	2530.07	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.835;DP=687;FS=1.362;HRun=3;HaplotypeScore=95.9814;InbreedingCoeff=0.9924;MQ=73.43;MQ0=0;MQRankSum=-8.608;QD=27.50;ReadPosRankSum=2.222;VQSLOD=3.0814;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.29:0,96,1152	0/0:14,0:14:39.12:0,39,468	0/0:15,0:15:15.46:0,15,314	0/0:11,0:11:24.54:0,25,282	0/0:29,0:29:87.24:0,87,1020	1/1:2,24:26:72.09:691,72,0	0/0:25,0:25:69.21:0,69,828	0/0:34,0:34:90.27:0,90,1080	0/0:29,0:29:81.25:0,81,972	0/0:29,0:29:84.26:0,84,1008	0/0:22,0:22:57.17:0,57,684	0/0:32,0:32:93.28:0,93,1116	1/1:1,16:17:50.91:449,51,0	1/1:3,17:20:54.03:490,54,0	0/0:33,0:33:90.28:0,90,1080	0/0:34,0:34:99:0,99,1166	0/0:24,0:24:66.20:0,66,788	0/0:10,0:10:30.09:0,30,360	0/0:16,0:16:48.13:0,48,558	0/0:42,0:42:99:0,117,1390	0/0:32,0:32:96.29:0,96,1152	0/0:21,0:21:63.19:0,63,755	0/0:30,0:30:87.27:0,87,1044	0/0:16,0:16:42.13:0,42,504	0/0:28,0:28:72.22:0,72,864	1/1:4,20:24:69.20:879,69,0	0/0:34,0:33:99:0,102,1220	1/1:0,5:5:15.05:195,15,0
chr10	80376226	.	AT	A	2152.09	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.131;DP=698;FS=3.648;HRun=4;HaplotypeScore=93.9629;InbreedingCoeff=0.9940;MQ=73.27;MQ0=0;MQRankSum=-10.824;QD=30.74;ReadPosRankSum=0.505;VQSLOD=3.7708;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1426	0/0:15,0:15:45.15:0,45,630	0/0:13,0:13:36.12:0,36,485	0/0:11,0:11:30.06:0,30,386	0/0:37,0:37:99:0,111,1537	1/1:1,27:28:81.25:968,81,0	0/0:19,0:19:54.18:0,54,755	0/0:31,0:31:93.27:0,93,1279	0/0:31,0:31:87.29:0,87,1218	0/0:37,0:37:99:0,99,1386	0/0:22,0:22:63.21:0,63,882	0/0:32,0:32:90.30:0,90,1259	1/1:2,17:19:51.15:608,51,0	1/1:2,21:23:60.18:718,60,0	0/0:35,0:35:99:0,102,1427	0/0:35,0:35:99:0,99,1371	0/0:19,0:19:54.18:0,54,756	0/0:12,0:12:33.11:0,33,462	0/0:19,0:19:51.16:0,51,698	0/0:43,0:43:99:0,126,1764	0/0:32,0:32:96.32:0,96,1342	0/0:19,0:19:57.19:0,57,797	0/0:29,0:29:84.28:0,84,1173	0/0:14,0:14:36.12:0,36,504	0/0:24,0:24:72.24:0,72,1007	0/0:22,0:22:63.21:0,63,882	0/0:37,0:36:93.28:0,93,1277	0/0:5,0:5:15.04:0,15,193
chr10	80376580	.	AT	A	1147.05	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.106;DP=474;FS=2.038;HRun=6;HaplotypeScore=51.0356;InbreedingCoeff=0.9803;MQ=71.02;MQ0=0;MQRankSum=1.386;QD=24.41;ReadPosRankSum=2.832;VQSLOD=3.3266;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:33.11:0,33,434	0/0:10,0:10:27.09:0,27,355	0/0:12,0:10:12.02:0,12,134	0/0:10,0:10:17.92:0,18,150	0/0:28,0:28:81.25:0,81,1052	1/1:0,23:23:63.16:677,63,0	0/0:10,0:10:24.08:0,24,313	0/0:33,0:33:87.25:0,87,1093	0/0:11,0:11:33.11:0,33,434	0/0:25,0:25:72.23:0,72,943	0/0:16,1:17:18.91:0,19,586	0/0:15,0:15:39.11:0,39,497	1/1:3,10:13:30.07:322,30,0	1/1:1,10:11:27.07:290,27,0	0/0:21,0:21:57.17:0,57,734	0/0:16,0:16:42.12:0,42,537	0/0:13,0:13:33.08:0,33,417	0/0:14,0:14:42.14:0,42,550	0/0:19,0:19:54.18:0,54,709	0/0:36,0:36:99:0,105,1356	0/0:10,0:10:30.10:0,30,394	0/0:9,0:9:27.08:0,27,343	0/0:24,0:24:69.21:0,69,893	0/0:9,0:9:24.08:0,24,314	0/0:21,0:21:57.17:0,57,734	0/0:22,0:22:57.19:0,57,750	0/0:21,0:21:57.15:0,57,706	0/0:9,0:9:27.09:0,27,353
chr10	80377141	.	TAA	T	4480.53	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.312;DP=612;FS=1.841;HRun=2;HaplotypeScore=73.7770;InbreedingCoeff=0.9995;MQ=79.62;MQ0=0;MQRankSum=-1.450;QD=45.26;ReadPosRankSum=4.816;VQSLOD=4.8827;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.25:0,93,1710	0/0:12,0:12:33.10:0,33,654	0/0:17,0:17:41.27:0,41,767	0/0:13,0:13:38.36:0,38,564	0/0:29,0:29:87.28:0,87,1730	1/1:0,14:14:36.12:587,36,0	0/0:17,0:17:51.10:0,51,959	0/0:36,0:36:99:0,108,2112	0/0:22,0:22:66.20:0,66,1256	0/0:20,0:20:60.19:0,60,1147	0/0:12,0:12:36.12:0,36,730	0/0:22,0:22:66.23:0,66,1341	1/1:0,23:23:66.23:1069,66,0	1/1:0,21:21:57.19:929,57,0	0/0:33,0:33:96.30:0,96,1836	0/0:21,0:21:63.20:0,63,1244	0/0:23,0:23:69.19:0,69,1276	0/0:10,0:10:30.10:0,30,609	0/0:26,0:26:78.26:0,78,1536	0/0:28,0:28:78.27:0,78,1556	0/0:16,0:16:48.16:0,48,975	0/0:28,0:28:84.21:0,84,1570	0/0:28,0:28:84.25:0,84,1619	0/0:19,0:19:57.14:0,57,1082	0/0:15,0:15:45.15:0,45,914	1/1:1,29:30:29.36:1358,29,0	0/0:35,0:35:99:0,105,2112	1/1:0,11:11:33.11:538,33,0
chr10	80377468	.	AAC	A	1676.57	PASS	AB=0.877;AC=34;AF=0.680;AN=50;BaseQRankSum=3.642;DP=597;FS=33.417;HRun=0;HaplotypeScore=120.7301;InbreedingCoeff=0.2278;MQ=55.86;MQ0=18;MQRankSum=1.024;QD=3.77;ReadPosRankSum=2.034;VQSLOD=0.7347;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:10.86:0,11,76	1/1:4,5:9:8.39:73,8,0	./.	./.	1/1:23,6:30:49.53:448,50,0	0/1:18,0:17:0:0,0,0	0/1:19,6:25:24.67:25,0,64	1/1:28,0:28:2.37:8,2,0	0/1:16,1:17:95.37:95,0,210	0/1:17,10:28:25.16:121,0,25	1/1:13,0:13:2.34:28,2,0	0/1:11,0:11:16.16:16,0,69	0/0:12,0:12:0.40:0,0,1	1/1:16,0:16:3.78:17,4,0	1/1:16,6:23:26.54:251,27,0	1/1:9,12:21:17.84:197,18,0	1/1:14,13:26:10.87:199,11,0	1/1:9,7:15:7.72:96,8,0	1/1:6,0:8:7.41:42,7,0	1/1:19,1:27:3.81:58,4,0	0/1:28,0:38:2.56:3,0,60	0/1:18,7:25:17.19:17,0,121	0/0:19,2:21:38.04:0,38,426	0/0:38,0:34:23.59:0,24,401	1/1:11,0:18:11.33:56,11,0	./.	1/1:13,0:26:12.64:77,13,0	0/1:13,0:13:1.83:2,0,25
chr10	80378150	.	T	TACAA	19935.70	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-8.517;DP=698;FS=2.362;HRun=0;HaplotypeScore=114.5478;InbreedingCoeff=0.9904;MQ=71.22;MQ0=1;MQRankSum=-4.956;QD=38.41;ReadPosRankSum=-0.236;VQSLOD=5.1179;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,1:27:42.09:641,42,0	1/1:3,10:13:24.08:580,24,0	0/0:28,0:25:10.50:0,10,192	0/0:25,0:24:27.04:0,27,328	1/1:7,22:29:63.18:1464,63,0	1/1:16,1:33:45.15:764,45,0	0/0:12,0:12:21.05:0,21,315	1/1:19,12:34:46.33:1212,46,0	0/0:23,0:23:48.15:0,48,743	1/1:4,17:24:60.18:1342,60,0	1/1:15,21:38:66.07:1420,66,0	0/0:23,0:23:57.16:0,57,879	1/1:8,1:26:36.12:628,36,0	1/1:11,1:19:24.05:394,24,0	1/1:7,20:27:36.11:870,36,0	1/1:6,12:19:27.09:653,27,0	1/1:7,13:21:30.10:725,30,0	1/1:4,9:16:24.08:579,24,0	1/1:11,12:23:39.09:880,39,0	1/1:11,24:35:60.13:1345,60,0	1/1:9,20:29:63.17:1451,63,0	0/0:26,0:26:63.21:0,63,1018	0/0:29,0:30:72.21:0,72,1085	0/0:12,0:12:27.09:0,27,428	1/1:10,23:33:57.20:1372,57,0	1/1:7,15:23:48.15:1077,48,0	1/1:9,28:38:72.25:1740,72,0	1/1:0,11:11:33.11:797,33,0
chr10	80382979	.	A	ACG	4159.48	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-6.235;DP=417;FS=11.693;HRun=0;HaplotypeScore=45.9138;InbreedingCoeff=0.9852;MQ=75.30;MQ0=0;MQRankSum=-0.002;QD=42.44;ReadPosRankSum=3.638;VQSLOD=4.8210;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.16:0,54,791	0/0:7,0:7:18.05:0,18,254	0/0:14,0:14:36.10:0,36,488	0/0:6,0:6:15:0,15,183	0/0:25,0:25:75.25:0,75,1143	1/1:0,27:27:57.20:1090,57,0	0/0:11,0:11:33.10:0,33,480	0/0:33,0:33:96.27:0,96,1323	0/0:6,0:6:18.06:0,18,273	0/0:16,0:16:48.15:0,48,699	0/0:22,0:22:63.21:0,63,959	0/0:13,0:13:39.11:0,39,553	1/1:2,13:15:30.10:572,30,0	1/1:0,17:17:33.11:634,33,0	0/0:12,0:12:36.12:0,36,549	0/0:11,0:11:30.10:0,30,459	0/0:16,0:16:48.10:0,48,666	0/0:9,0:9:27.05:0,27,387	0/0:11,0:11:33.11:0,33,504	0/0:18,0:18:54.18:0,54,823	0/0:7,0:7:21.05:0,21,299	0/0:5,0:5:15.04:0,15,208	0/0:8,0:8:21.07:0,21,321	0/0:7,0:7:21.07:0,21,318	0/0:14,0:14:42.13:0,42,620	1/1:6,23:29:32.28:1334,32,0	0/0:29,0:28:87.24:0,87,1279	1/1:4,6:10:30.10:528,30,0
chr10	80383034	.	AG	A	1207.99	PASS	AB=0.950;AC=6;AF=0.107;AN=56;BaseQRankSum=5.527;DP=412;FS=0.000;HRun=2;HaplotypeScore=53.9421;InbreedingCoeff=0.6879;MQ=74.06;MQ0=0;MQRankSum=-0.277;QD=21.57;ReadPosRankSum=-0.380;VQSLOD=3.2427;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.15:0,51,724	0/0:7,0:7:21.06:0,21,296	0/1:8,0:7:2.52:3,0,166	0/1:8,0:9:5.09:5,0,95	0/0:20,0:20:60.17:0,60,852	0/0:16,0:16:42.13:0,42,606	0/0:12,0:12:36.10:0,36,517	0/0:32,0:32:93.25:0,93,1252	0/0:14,0:14:42.14:0,42,626	0/0:16,0:16:48.14:0,48,662	0/0:17,0:17:50.97:0,51,648	0/0:18,0:18:54.16:0,54,767	0/0:14,0:14:36.12:0,36,537	0/0:22,0:22:57.18:0,57,816	0/0:15,0:15:45.15:0,45,673	0/0:8,0:8:24.07:0,24,339	0/0:14,0:14:39.09:0,39,558	0/0:17,0:17:51.10:0,51,733	0/0:21,0:21:63.15:0,63,890	0/0:12,0:12:36.12:0,36,538	0/0:10,0:10:30.10:0,30,448	0/0:3,0:3:9.03:0,9,133	0/0:9,0:9:27.05:0,27,345	0/0:5,0:5:15.05:0,15,224	0/0:12,0:12:36.12:0,36,538	1/1:5,24:29:36.33:942,36,0	0/0:25,0:23:75.18:0,75,1026	1/1:0,10:10:30.10:385,30,0
chr10	80383352	.	TATC	T	2503.29	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.081;DP=464;FS=14.990;HRun=0;HaplotypeScore=65.6897;InbreedingCoeff=0.9453;MQ=76.76;MQ0=0;MQRankSum=-2.551;QD=36.81;ReadPosRankSum=1.756;VQSLOD=3.1495;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.15:0,45,967	0/0:7,0:7:21.07:0,21,464	0/0:13,0:13:36.12:0,36,721	0/0:7,0:7:6.52:0,7,188	0/0:41,0:41:99:0,123,2670	1/1:0,17:17:45.15:723,45,0	0/0:12,0:12:30.10:0,30,660	0/0:40,0:40:99:0,102,2172	0/0:8,0:8:21.07:0,21,464	0/0:21,0:21:63.22:0,63,1371	0/0:25,0:25:75.26:0,75,1651	0/0:10,0:10:30.10:0,30,639	1/1:1,12:13:33.11:530,33,0	1/1:0,11:11:24.08:385,24,0	0/0:16,0:16:42.14:0,42,910	0/0:15,0:15:45.15:0,45,991	0/0:14,0:14:42.14:0,42,924	0/0:17,0:17:39.13:0,39,845	0/0:17,0:17:48.13:0,48,919	0/0:25,0:25:72.23:0,72,1542	0/0:7,0:7:18.06:0,18,378	0/0:12,0:12:36.12:0,36,794	0/0:18,0:18:54.19:0,54,1170	0/0:5,0:5:15.05:0,15,331	0/0:20,0:20:54.19:0,54,1171	1/1:1,20:21:60.18:938,60,0	0/0:30,0:30:78.27:0,78,1717	1/1:0,6:6:6.02:96,6,0
chr10	80384478	.	G	GGAT	6336.58	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.893;DP=747;FS=7.820;HRun=0;HaplotypeScore=96.9638;InbreedingCoeff=0.9799;MQ=72.85;MQ0=0;MQRankSum=-2.219;QD=41.42;ReadPosRankSum=4.621;VQSLOD=5.8634;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,31:36:75.26:1545,75,0	0/0:7,0:7:14.99:0,15,180	0/0:19,0:19:44.93:0,45,604	0/0:25,0:25:54.55:0,55,703	0/0:32,0:32:81.25:0,81,1187	1/1:3,21:24:48.16:982,48,0	0/0:28,0:28:75.22:0,75,1064	0/0:31,0:31:78.21:0,78,1055	0/0:31,0:31:84.25:0,84,1196	0/0:36,0:36:93.30:0,93,1359	0/0:21,0:21:57.18:0,57,834	0/0:31,0:31:87.28:0,87,1277	1/1:10,26:37:15.30:1094,15,0	1/1:3,22:25:60.21:1252,60,0	0/0:35,0:35:93.28:0,93,1332	0/0:34,0:34:93.27:0,93,1315	0/0:12,0:12:36.12:0,36,538	0/0:12,0:12:19.96:0,20,393	0/0:23,0:23:54.13:0,54,721	0/0:36,0:36:90.27:0,90,1304	0/0:42,0:42:99:0,111,1604	0/0:29,0:29:75.23:0,75,1083	0/0:27,0:27:63.14:0,63,858	0/0:23,0:23:66.20:0,66,949	0/0:31,0:31:78.21:0,78,1085	1/1:4,23:27:21.39:1275,21,0	0/0:29,0:29:69.20:0,69,989	1/1:1,3:4:9.03:188,9,0
chr10	80386171	.	AGTGTGTGTGT	A	276.51	PASS	AC=4;AF=0.105;AN=38;BaseQRankSum=4.059;DP=543;FS=0.000;HRun=0;HaplotypeScore=146.4912;InbreedingCoeff=0.4743;MQ=59.89;MQ0=24;MQRankSum=-4.317;QD=6.58;ReadPosRankSum=-1.262;VQSLOD=2.2655;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:8.37:0,8,115	0/0:6,0:5:2.99:0,3,24	./.	0/0:25,0:16:0.47:0,0,1	./.	0/0:16,0:23:8.70:0,9,168	0/0:31,0:30:15.98:0,16,530	0/0:23,0:22:1.82:0,2,6	0/0:20,0:19:9.01:0,9,168	./.	./.	0/0:18,0:17:6.49:0,6,251	0/0:19,0:19:30.10:0,30,1132	0/0:25,0:24:36.12:0,36,1338	./.	./.	1/1:21,2:27:14.83:335,15,0	0/0:18,0:17:3.06:0,3,8	0/0:25,0:23:0.47:0,0,1	1/1:13,2:14:3.01:38,3,0	./.	0/0:12,0:13:6.01:0,6,75	0/0:14,0:14:6.02:0,6,189	0/0:32,0:33:47.63:0,48,1681	./.	0/0:18,0:18:9.03:0,9,367	./.	0/0:6,0:4:3.01:0,3,110
chr10	80386833	.	T	TA	987.16	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=-5.755;DP=551;FS=1.437;HRun=8;HaplotypeScore=53.3336;InbreedingCoeff=0.9446;MQ=78.73;MQ0=0;MQRankSum=-0.400;QD=26.68;ReadPosRankSum=1.853;VQSLOD=4.3613;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:42.02:0,42,384	0/0:6,0:6:18.01:0,18,165	0/0:17,0:17:16.71:0,17,141	0/0:7,0:8:6.66:0,7,126	0/0:33,0:33:81.02:0,81,737	0/0:17,0:17:48.03:0,48,439	0/0:11,0:11:30.02:0,30,274	0/0:23,0:23:48:0,48,436	0/0:18,0:18:51.03:0,51,467	0/0:24,0:24:63.01:0,63,576	0/0:25,0:25:72.04:0,72,658	0/0:17,0:17:51.03:0,51,466	1/1:1,19:20:54.16:623,54,0	1/1:1,16:17:42.12:485,42,0	0/0:17,0:17:51.03:0,51,467	0/0:25,0:24:63:0,63,571	0/0:33,0:33:87.04:0,87,796	0/0:16,0:16:42.02:0,42,384	0/0:18,0:18:47.99:0,48,429	0/0:34,0:35:90.03:0,90,823	0/0:19,0:19:45.01:0,45,412	0/0:28,0:28:69.03:0,69,632	0/0:14,0:14:41.99:0,42,377	0/0:21,0:21:57.03:0,57,520	0/0:17,0:17:48.03:0,48,439	0/0:28,0:28:75.02:0,75,679	0/0:25,0:25:75.04:0,75,686	./.
chr10	80387253	.	T	TC	11245.46	PASS	AB=0.556;AC=39;AF=0.696;AN=56;BaseQRankSum=18.649;DP=578;FS=12.060;HRun=0;HaplotypeScore=194.3268;InbreedingCoeff=0.8861;MQ=77.61;MQ0=0;MQRankSum=-18.217;QD=29.99;ReadPosRankSum=3.482;VQSLOD=2.8101;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:41.80:406,42,0	1/1:0,14:14:41.94:416,42,0	0/0:24,0:24:69.22:0,69,925	0/0:16,0:16:42.08:0,42,494	1/1:0,21:21:57.10:563,57,0	1/1:3,18:21:56.97:594,57,0	0/0:25,0:25:66.21:0,66,907	1/1:0,24:24:72.21:884,72,0	0/0:21,0:21:63.21:0,63,881	1/1:1,27:30:83.34:1050,83,0	1/1:4,19:23:51.30:496,51,0	0/0:19,0:19:51.17:0,51,713	1/1:2,23:25:74.98:744,75,0	1/1:0,24:24:71.92:706,72,0	1/1:0,20:20:60.05:607,60,0	1/1:2,20:22:66.15:698,66,0	1/1:0,6:6:11.89:107,12,0	0/1:1,4:5:20.48:119,0,20	1/1:2,8:10:30.07:358,30,0	1/1:0,34:34:96.07:978,96,0	1/1:0,3:3:6.01:61,6,0	0/0:38,0:38:99:0,114,1588	0/0:32,0:32:96.31:0,96,1328	0/0:28,0:28:84.27:0,84,1155	1/1:1,17:18:44.89:455,45,0	1/1:0,28:28:84.22:969,84,0	1/1:1,28:30:89.72:931,90,0	1/1:0,3:3:9.03:103,9,0
chr10	80387254	.	TAATG	T	11727.77	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=19.444;DP=569;FS=9.607;HRun=0;HaplotypeScore=225.1628;InbreedingCoeff=0.9620;MQ=76.46;MQ0=0;MQRankSum=-18.776;QD=31.78;ReadPosRankSum=4.256;VQSLOD=3.1114;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:42.01:427,42,0	1/1:0,14:14:42.07:456,42,0	0/0:23,0:23:66.19:0,66,1582	0/0:15,0:15:45.15:0,45,1162	1/1:0,21:21:57.15:629,57,0	1/1:3,18:21:54.06:572,54,0	0/0:25,0:25:75.24:0,75,2077	1/1:2,21:23:69.21:849,69,0	0/0:21,0:21:63.22:0,63,1825	1/1:3,27:30:87.26:1078,87,0	1/1:3,18:21:50.95:515,51,0	0/0:19,0:19:57.20:0,57,1590	1/1:1,23:24:72.14:781,72,0	1/1:1,23:24:72.10:759,72,0	1/1:0,20:20:60.14:662,60,0	1/1:1,20:21:63.16:699,63,0	1/1:0,6:6:12:121,12,0	1/1:1,4:5:12.04:141,12,0	1/1:2,8:10:27.07:327,27,0	1/1:0,34:34:96.21:1063,96,0	1/1:0,3:3:5.75:67,6,0	0/0:38,0:38:99:0,114,3107	0/0:32,0:32:96.33:0,96,2776	0/0:27,0:27:81.26:0,81,2275	1/1:1,17:18:45.06:472,45,0	1/1:0,28:28:84.26:1014,84,0	1/1:1,28:28:87.23:989,87,0	1/1:0,3:3:9.03:107,9,0
chr10	80387260	.	ATT	A	12352.51	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=19.252;DP=569;FS=1.411;HRun=3;HaplotypeScore=202.2221;InbreedingCoeff=0.9648;MQ=76.43;MQ0=0;MQRankSum=-18.534;QD=33.39;ReadPosRankSum=3.387;VQSLOD=4.5190;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:39.06:423,39,0	1/1:0,14:14:42.11:479,42,0	0/0:19,0:19:57.18:0,57,1041	0/0:19,0:19:53.67:0,54,966	1/1:1,21:22:60.18:704,60,0	1/1:2,18:20:57.09:645,57,0	0/0:25,0:25:75.26:0,75,1435	1/1:0,21:21:63.20:795,63,0	0/0:21,0:21:63.22:0,63,1212	1/1:3,27:30:87.01:1073,87,0	1/1:3,18:21:51.42:534,51,0	0/0:21,0:21:63.22:0,63,1210	1/1:0,23:23:69.18:811,69,0	1/1:1,24:25:75.18:841,75,0	1/1:1,20:21:63.16:731,63,0	1/1:0,20:20:60.18:718,60,0	1/1:0,6:6:12.02:128,12,0	1/1:1,4:5:15.01:168,15,0	1/1:4,8:12:34.90:405,35,0	1/1:1,34:35:98.30:1128,98,0	1/1:0,3:3:5.84:69,6,0	0/0:35,0:35:99:0,105,2012	0/0:34,0:34:99:0,102,1964	0/0:25,0:25:75.26:0,75,1437	1/1:0,17:17:42.09:480,42,0	1/1:0,28:28:84.26:1035,84,0	1/1:2,29:31:92.27:1072,92,0	1/1:0,3:3:9.03:113,9,0
chr10	80387993	.	AT	A	693.99	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.528;DP=531;FS=11.219;HRun=7;HaplotypeScore=67.4121;InbreedingCoeff=0.9866;MQ=64.84;MQ0=2;MQRankSum=0.413;QD=23.13;ReadPosRankSum=0.352;VQSLOD=3.1002;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:30:76.77:789,77,0	0/0:12,0:12:33.11:0,33,415	0/0:20,0:15:26.64:0,27,285	0/0:15,1:11:18.86:0,19,243	0/0:22,0:22:60.19:0,60,755	0/0:13,0:13:39.12:0,39,490	0/0:8,0:8:24.08:0,24,301	0/0:23,0:23:60.18:0,60,744	0/0:11,0:11:33.11:0,33,415	0/0:28,0:28:75.24:0,75,943	0/0:24,0:24:66.21:0,66,830	0/0:18,0:18:51.15:0,51,629	0/0:13,0:13:36.10:0,36,438	0/0:16,0:16:39.11:0,39,476	0/0:11,0:11:33.11:0,33,415	0/0:17,0:17:51.16:0,51,642	0/0:25,0:25:72.21:0,72,891	0/0:15,0:15:42.13:0,42,526	0/0:16,0:16:39.12:0,39,479	0/0:30,0:30:84.27:0,84,1056	0/0:8,0:8:24.08:0,24,302	0/0:17,0:17:48.15:0,48,603	0/0:25,0:25:72.19:0,72,885	0/0:10,0:10:30.10:0,30,377	0/0:41,0:39:99:0,120,1496	0/0:25,0:25:66.18:0,66,803	0/0:22,0:22:60.18:0,60,741	0/0:13,0:13:39.12:0,39,490
chr10	80391721	.	GTGTA	G	353.95	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.666;DP=526;FS=1.228;HRun=0;HaplotypeScore=88.5182;InbreedingCoeff=0.9947;MQ=59.13;MQ0=3;MQRankSum=-5.681;QD=22.12;ReadPosRankSum=-2.377;VQSLOD=2.7789;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:27.06:0,27,651	0/0:15,0:15:45.13:0,45,1128	0/0:28,0:16:42.12:0,42,949	0/0:29,0:13:32.76:0,33,652	0/0:24,0:24:72.25:0,72,1921	1/1:0,16:16:32.97:449,33,0	0/0:14,0:14:42.11:0,42,921	0/0:30,0:30:87.17:0,87,1887	0/0:15,0:15:42.14:0,42,1088	0/0:23,0:23:66.22:0,66,1713	0/0:21,0:21:57.20:0,57,1511	0/0:15,0:15:42.13:0,42,1054	0/0:10,0:10:27.04:0,27,548	0/0:19,0:19:56.54:0,57,1395	0/0:17,0:17:48.16:0,48,1279	0/0:14,0:14:42.14:0,42,1133	0/0:28,0:28:66.17:0,66,1591	0/0:11,0:11:33.07:0,33,728	0/0:17,0:15:45.07:0,45,1018	0/0:25,0:25:72.25:0,72,1886	0/0:25,0:25:72.25:0,72,1850	0/0:16,0:16:48.14:0,48,1169	0/0:8,0:8:24.08:0,24,647	0/0:16,0:16:33.04:0,33,695	0/0:23,0:23:69.22:0,69,1805	0/0:15,0:15:42.14:0,42,1079	0/0:22,0:22:63.18:0,63,1555	0/0:16,0:16:48.08:0,48,1063
chr10	80391894	.	A	AT	11067.11	PASS	AB=0.556;AC=35;AF=0.625;AN=56;BaseQRankSum=-8.690;DP=400;FS=25.086;HRun=5;HaplotypeScore=41.8267;InbreedingCoeff=0.8924;MQ=70.29;MQ0=1;MQRankSum=-1.579;QD=35.13;ReadPosRankSum=-0.825;VQSLOD=2.5213;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:37.45:691,37,0	1/1:1,9:10:24.08:316,24,0	0/0:7,0:6:12.03:0,12,127	0/0:8,0:7:12:0,12,115	1/1:1,22:23:66.17:846,66,0	1/1:0,13:13:33.11:427,33,0	0/0:8,0:8:24.06:0,24,258	1/1:0,38:38:99:1485,114,0	0/0:8,0:8:24.04:0,24,249	1/1:1,16:17:45.13:578,45,0	1/1:1,19:20:51.17:671,51,0	0/0:6,0:6:18.05:0,18,193	0/0:9,0:9:24.06:0,24,256	0/0:15,0:15:45.11:0,45,484	1/1:0,11:11:30.10:390,30,0	1/1:1,5:6:15.05:197,15,0	1/1:2,17:19:48.15:625,48,0	1/1:2,5:7:2.26:182,2,0	0/1:2,8:9:5.04:288,0,5	1/1:3,19:22:57.19:750,57,0	1/1:0,4:4:12.04:156,12,0	0/0:11,0:11:33.08:0,33,355	0/0:8,0:8:21.05:0,21,226	0/0:5,0:5:15.04:0,15,161	1/1:2,19:21:48.16:632,48,0	1/1:1,23:24:69.18:863,69,0	1/1:0,30:31:93.30:1222,93,0	1/1:1,19:20:57.19:750,57,0
chr10	80392380	.	TG	T	722.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.408;DP=708;FS=0.000;HRun=3;HaplotypeScore=69.1080;InbreedingCoeff=0.9988;MQ=75.83;MQ0=4;MQRankSum=0.350;QD=26.77;ReadPosRankSum=0.903;VQSLOD=2.6373;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1642	0/0:14,0:14:42.09:0,42,548	0/0:30,0:26:78.20:0,78,1053	0/0:37,0:27:81.26:0,81,1126	0/0:30,0:30:87.27:0,87,1227	1/1:2,25:27:66.21:818,66,0	0/0:23,0:23:66.19:0,66,913	0/0:33,0:33:93.29:0,93,1315	0/0:19,0:19:57.17:0,57,785	0/0:24,0:24:60.19:0,60,832	0/0:12,0:12:36.01:0,36,490	0/0:25,0:25:75.22:0,75,1024	0/0:23,0:23:69.22:0,69,973	0/0:17,0:17:51.16:0,51,714	0/0:30,0:30:90.29:0,90,1272	0/0:18,0:18:54.15:0,54,739	0/0:24,0:23:69.23:0,69,993	0/0:23,0:23:69.23:0,69,986	0/0:28,0:28:72.24:0,72,1036	0/0:23,0:23:69.20:0,69,954	0/0:39,0:39:99:0,111,1495	0/0:25,0:24:66.21:0,66,931	0/0:29,0:29:75.24:0,75,1051	0/0:27,0:27:78.22:0,78,1068	0/0:16,0:16:48.14:0,48,657	0/0:25,0:25:69.22:0,69,976	0/0:37,0:37:99:0,111,1577	0/0:9,0:9:27.09:0,27,377
chr10	80393312	.	C	CT	694.33	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.932;DP=612;FS=5.934;HRun=5;HaplotypeScore=70.6070;InbreedingCoeff=0.9960;MQ=58.83;MQ0=5;MQRankSum=0.226;QD=24.80;ReadPosRankSum=-1.629;VQSLOD=2.0462;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:28:60.20:789,60,0	0/0:12,0:12:33.08:0,33,355	0/0:23,0:16:30.07:0,30,318	0/0:19,0:10:23.99:0,24,223	0/0:30,0:30:84.21:0,84,903	0/0:26,0:26:69.16:0,69,733	0/0:13,0:13:36.09:0,36,387	0/0:40,0:39:99:0,108,1161	0/0:10,0:10:30.08:0,30,322	0/0:36,0:36:99:0,99,1048	0/0:24,0:24:72.17:0,72,767	0/0:13,0:13:33.08:0,33,354	0/0:29,0:29:81.19:0,81,862	0/0:17,0:17:51.13:0,51,548	0/0:22,0:22:57.12:0,57,605	0/0:16,0:16:48.12:0,48,516	0/0:26,0:26:66.14:0,66,700	0/0:18,0:18:45.09:0,45,470	0/0:25,0:21:45.11:0,45,484	0/0:28,0:28:78.19:0,78,832	0/0:19,0:19:57.14:0,57,612	0/0:22,0:22:63.16:0,63,676	0/0:22,0:22:60.15:0,60,644	0/0:18,0:18:45.11:0,45,484	0/0:23,0:23:69.14:0,69,725	0/0:20,0:20:60.15:0,60,645	0/0:22,0:21:54.13:0,54,580	0/0:11,0:11:33.08:0,33,355
chr10	80393712	.	TC	T	672.54	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.858;DP=609;FS=2.759;HRun=5;HaplotypeScore=59.3725;InbreedingCoeff=0.9105;MQ=56.09;MQ0=10;MQRankSum=-1.987;QD=26.90;ReadPosRankSum=1.599;VQSLOD=3.7592;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:45.15:0,45,614	0/0:17,0:17:48.13:0,48,623	0/0:19,0:3:9.03:0,9,117	0/0:17,0:4:12.04:0,12,155	0/0:40,0:40:99:0,114,1501	1/1:0,25:25:69.16:767,69,0	0/0:18,0:18:51.17:0,51,697	0/0:40,0:39:99:0,105,1390	0/0:15,0:15:42.13:0,42,557	0/0:21,0:21:60.19:0,60,796	0/0:28,0:28:75.23:0,75,995	0/0:12,0:12:33.08:0,33,418	0/0:27,0:27:81.26:0,81,1090	0/0:17,0:17:51.15:0,51,680	0/0:23,0:23:69.22:0,69,928	0/0:17,0:17:51.16:0,51,683	0/0:19,0:19:51.17:0,51,697	0/0:8,0:7:18.06:0,18,243	0/0:17,0:17:45.11:0,45,582	0/0:30,0:29:81.25:0,81,1076	0/0:18,0:18:51.10:0,51,629	0/0:20,0:20:57.18:0,57,764	0/0:18,0:18:54.17:0,54,722	0/0:15,0:15:45.12:0,45,568	0/0:35,0:35:99:0,99,1301	0/0:21,0:21:57.19:0,57,779	0/0:41,0:41:99:0,119,1552	0/0:11,0:10:27.07:0,27,352
chr10	80394167	.	AC	A	15619.04	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=11.728;DP=627;FS=14.075;HRun=1;HaplotypeScore=102.2688;InbreedingCoeff=0.9772;MQ=71.44;MQ0=0;MQRankSum=1.572;QD=37.55;ReadPosRankSum=3.232;VQSLOD=3.6553;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:6.81:507,7,0	1/1:0,4:4:8.99:104,9,0	0/0:20,0:20:59.98:0,60,855	0/0:14,0:13:34.14:0,34,543	1/1:1,41:42:72.44:1539,72,0	0/0:29,0:28:84.20:0,84,1261	0/0:14,0:14:42.09:0,42,598	1/1:0,30:30:90.29:1241,90,0	0/0:10,0:10:30.10:0,30,478	1/1:0,19:19:57.19:794,57,0	1/1:0,28:28:78.09:1021,78,0	0/0:18,0:18:54.18:0,54,860	0/0:28,0:28:84.24:0,84,1263	0/0:18,0:18:54.18:0,54,860	1/1:0,28:28:78.26:1090,78,0	1/1:0,27:27:69.23:964,69,0	1/1:0,23:23:60.20:837,60,0	1/1:0,10:10:24.08:335,24,0	1/1:0,20:20:60.16:786,60,0	1/1:0,40:40:99:1551,114,0	1/1:0,14:14:36.12:502,36,0	0/0:26,0:26:78.12:0,78,1185	0/0:19,0:19:57.11:0,57,873	0/0:15,0:15:45.13:0,45,681	1/1:0,34:34:93.31:1300,93,0	1/1:0,34:34:99:1372,102,0	1/1:0,37:37:99:1425,102,0	1/1:0,8:8:18.06:250,18,0
chr10	80394217	.	TTTTGAC	T	1273.07	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.138;DP=650;FS=0.881;HRun=0;HaplotypeScore=161.0972;InbreedingCoeff=0.8961;MQ=58.13;MQ0=6;MQRankSum=-6.896;QD=43.90;ReadPosRankSum=2.523;VQSLOD=3.5606;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.20:0,57,2028	0/0:7,0:7:21.03:0,21,668	0/0:13,0:2:6.02:0,6,201	0/0:15,0:10:21.07:0,21,654	0/0:32,0:32:96.32:0,96,3262	1/1:5,24:28:57.19:1368,57,0	0/0:20,0:20:57.20:0,57,2051	0/0:25,0:23:69.23:0,69,2358	0/0:21,0:21:63.22:0,63,2209	0/0:16,0:16:45.15:0,45,1597	0/0:36,0:36:99:0,105,3674	0/0:29,0:29:87.30:0,87,3068	0/0:37,0:37:99:0,108,3845	0/0:18,0:18:51.16:0,51,1657	0/0:22,0:22:57.20:0,57,1997	0/0:29,0:29:75.25:0,75,2577	0/0:34,0:32:96.33:0,96,3392	0/0:15,0:15:42.14:0,42,1476	0/0:23,0:17:48.16:0,48,1723	0/0:38,0:38:99:0,114,4062	0/0:9,0:9:27.09:0,27,923	0/0:19,0:19:51.18:0,51,1796	0/0:23,0:23:69.22:0,69,2364	0/0:16,0:16:48.16:0,48,1631	0/0:26,0:26:69.24:0,69,2386	0/0:32,0:32:96.27:0,96,3012	0/0:34,0:33:99:0,102,3528	0/0:10,0:10:24.08:0,24,865
chr10	80394966	.	T	TA	1056.56	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.807;DP=600;FS=7.300;HRun=0;HaplotypeScore=60.2763;InbreedingCoeff=0.7983;MQ=67.65;MQ0=0;MQRankSum=-2.851;QD=39.13;ReadPosRankSum=1.690;VQSLOD=3.8844;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:0.70:0,1,501	0/0:6,0:6:18.05:0,18,235	0/0:23,0:23:69.18:0,69,928	0/0:13,0:13:27.56:0,28,368	0/0:36,0:36:99:0,105,1448	1/1:0,27:27:72.25:1151,72,0	0/0:13,0:13:39.13:0,39,545	0/0:25,0:25:72.21:0,72,948	0/0:20,0:20:60.19:0,60,822	0/0:21,0:21:60.20:0,60,824	0/0:34,0:34:99:0,99,1344	0/0:20,0:20:60.18:0,60,821	0/0:29,0:29:87.28:0,87,1199	0/0:18,0:18:54.17:0,54,738	0/0:25,0:25:72.24:0,72,1006	0/0:27,0:27:78.26:0,78,1089	0/0:29,0:29:44.05:0,44,895	0/0:18,0:18:42.23:0,42,623	0/0:11,0:11:33.11:0,33,462	0/0:26,0:26:78.26:0,78,1089	0/0:16,0:16:48.16:0,48,671	0/0:15,0:15:39.13:0,39,545	0/0:25,0:25:75.24:0,75,1032	0/0:16,0:16:48.16:0,48,671	0/0:21,0:21:63.21:0,63,881	0/0:27,0:27:81.26:0,81,1114	0/0:25,0:25:75.25:0,75,1047	0/0:19,0:19:57.10:0,57,753
chr10	80395351	.	A	AT	1192.89	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.906;DP=472;FS=1.389;HRun=8;HaplotypeScore=49.2969;InbreedingCoeff=0.8869;MQ=77.86;MQ0=0;MQRankSum=0.804;QD=27.74;ReadPosRankSum=0.086;VQSLOD=3.9731;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.01:0,51,462	0/0:9,0:9:27:0,27,242	0/0:14,0:14:34.60:0,35,315	0/0:10,1:10:4.77:0,5,87	0/0:24,0:24:63.02:0,63,577	0/0:4,0:24:41.21:0,41,121	0/0:13,0:13:39.02:0,39,357	0/0:29,0:29:66.02:0,66,604	0/0:13,0:13:36.02:0,36,329	0/0:23,0:23:63.03:0,63,572	0/0:22,0:22:60.03:0,60,548	0/0:11,0:11:33.02:0,33,302	1/1:2,15:17:45.13:518,45,0	1/1:3,23:26:69.20:796,69,0	0/0:17,0:17:45.02:0,45,412	0/0:17,0:17:42.01:0,42,384	0/0:8,0:8:24.01:0,24,220	0/0:3,0:3:6:0,6,55	0/0:21,0:21:51.02:0,51,467	0/0:26,0:26:69.03:0,69,632	0/0:12,0:12:27:0,27,247	0/0:17,0:17:45.02:0,45,412	0/0:18,0:18:48:0,48,434	0/0:10,0:10:24.01:0,24,220	0/0:12,0:12:33.02:0,33,302	0/0:24,0:24:66.02:0,66,600	0/0:16,0:16:45:0,45,407	0/0:17,0:17:51.03:0,51,467
chr10	80395399	.	AT	A	732.36	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.682;DP=438;FS=0.000;HRun=4;HaplotypeScore=43.8053;InbreedingCoeff=0.9490;MQ=73.30;MQ0=0;MQRankSum=-3.823;QD=28.17;ReadPosRankSum=0.709;VQSLOD=2.6567;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.14:0,42,588	0/0:8,0:8:24.08:0,24,336	0/0:10,0:10:30.10:0,30,405	0/0:8,0:8:18.06:0,18,252	0/0:16,0:16:48.16:0,48,672	1/1:2,24:26:69.21:827,69,0	0/0:9,0:9:24.08:0,24,336	0/0:32,0:32:96.30:0,96,1314	0/0:15,0:15:36.12:0,36,502	0/0:21,0:21:60.19:0,60,813	0/0:22,0:22:66.21:0,66,906	0/0:12,0:12:33.11:0,33,462	0/0:15,0:15:45.14:0,45,614	0/0:16,0:16:45.15:0,45,630	0/0:22,0:22:66.22:0,66,924	0/0:18,0:18:51.17:0,51,714	0/0:12,0:12:33.11:0,33,462	0/0:7,0:7:18.06:0,18,252	0/0:17,0:17:45.13:0,45,599	0/0:19,0:19:57.19:0,57,788	0/0:4,0:4:12.04:0,12,168	0/0:11,0:11:33.10:0,33,447	0/0:15,0:15:42.13:0,42,571	0/0:10,0:10:27.09:0,27,378	0/0:15,0:15:45.15:0,45,630	0/0:31,0:31:90.30:0,90,1259	0/0:21,0:21:60.20:0,60,840	0/0:11,0:11:30.09:0,30,404
chr10	80395486	.	AT	A	6803.59	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=8.243;DP=431;FS=7.380;HRun=8;HaplotypeScore=45.7461;InbreedingCoeff=0.9723;MQ=72.28;MQ0=0;MQRankSum=1.429;QD=24.56;ReadPosRankSum=-0.616;VQSLOD=5.0473;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:20.05:0,20,244	1/1:1,8:9:24.04:232,24,0	0/0:16,0:10:13.42:0,13,109	0/0:10,0:8:6.02:0,6,73	1/1:0,32:32:90.14:869,90,0	0/0:20,0:20:51.12:0,51,600	0/0:6,0:6:15.05:0,15,181	1/1:10,22:32:63.06:598,63,0	0/0:17,0:17:48.13:0,48,568	1/1:1,13:14:39.06:376,39,0	1/1:4,27:31:81.13:782,81,0	0/0:9,0:9:27.08:0,27,326	0/0:16,0:16:45.12:0,45,523	0/0:16,0:16:48.15:0,48,580	1/1:4,13:17:39.05:377,39,0	1/1:1,8:9:24.03:232,24,0	1/1:3,15:18:42.06:405,42,0	1/1:1,13:14:39.06:376,39,0	1/1:1,16:17:48.02:449,48,0	1/1:3,7:10:21:195,21,0	1/1:0,9:9:27.04:261,27,0	0/0:6,0:6:18.06:0,18,217	0/0:15,0:15:45.13:0,45,533	0/0:12,0:12:36.06:0,36,408	1/1:1,15:16:39.06:377,39,0	1/1:3,25:28:75.12:724,75,0	1/1:1,15:16:45.07:435,45,0	1/1:0,5:5:12.02:116,12,0
chr10	80395656	.	G	GTA	385.85	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=-5.346;DP=299;FS=0.000;HRun=0;HaplotypeScore=36.0135;InbreedingCoeff=0.7972;MQ=64.25;MQ0=0;MQRankSum=-0.199;QD=25.72;ReadPosRankSum=1.194;VQSLOD=3.9927;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:21.07:0,21,264	0/0:10,0:10:30.10:0,30,378	0/0:5,0:5:5.44:0,5,67	./.	0/0:14,0:14:33.07:0,33,388	./.	0/0:3,0:3:6.02:0,6,75	0/0:35,0:35:69.20:0,69,838	0/0:12,0:12:24.06:0,24,289	0/0:14,0:14:33.11:0,33,416	0/0:13,0:13:33.11:0,33,416	0/0:10,0:10:24.08:0,24,303	1/1:3,6:9:18.06:299,18,0	1/1:2,4:6:12.04:199,12,0	0/0:17,0:17:45.13:0,45,554	0/0:8,0:8:18.06:0,18,227	0/0:7,0:7:12.04:0,12,151	0/0:5,0:5:14.88:0,15,157	0/0:19,0:19:33.11:0,33,416	0/0:9,0:9:21.07:0,21,265	0/0:9,0:9:27.09:0,27,340	0/0:2,0:2:6.02:0,6,76	0/0:7,0:7:21.05:0,21,251	0/0:7,0:7:15.05:0,15,189	0/0:17,0:17:45.13:0,45,553	0/0:13,0:13:39.12:0,39,481	0/0:18,0:18:48.12:0,48,577	0/0:9,0:9:27.09:0,27,341
chr10	80395787	.	T	TTA	204.95	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.384;DP=382;FS=1.399;HRun=0;HaplotypeScore=47.6202;InbreedingCoeff=0.7202;MQ=75.37;MQ0=1;MQRankSum=-1.099;QD=12.81;ReadPosRankSum=0.868;VQSLOD=3.2983;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:12.04:0,12,158	0/0:9,0:9:24.06:0,24,298	1/1:5,0:2:2.04:6,2,0	0/0:18,0:13:0.08:0,0,69	0/0:31,0:31:84.24:0,84,1059	1/1:0,11:11:18.06:295,18,0	0/0:7,0:7:21.07:0,21,276	0/0:38,0:38:99:0,102,1327	0/0:14,0:14:39.11:0,39,487	0/0:20,0:20:57.16:0,57,710	0/0:21,0:21:63.17:0,63,796	0/0:5,0:5:15.05:0,15,197	0/0:11,0:11:30.10:0,30,394	0/0:12,0:12:36.10:0,36,457	0/0:15,0:15:30.10:0,30,394	0/0:12,0:12:33.11:0,33,432	0/0:10,0:10:18.05:0,18,221	0/0:10,0:10:27.09:0,27,355	0/0:12,0:12:27.55:0,28,343	0/0:16,0:16:45.04:0,45,522	0/0:6,0:6:14.95:0,15,160	0/0:5,0:5:15.05:0,15,197	0/0:11,0:11:27.09:0,27,354	0/0:6,0:6:15.05:0,15,194	0/0:20,0:20:42.14:0,42,551	0/0:18,0:18:48.12:0,48,589	0/0:23,0:23:57.17:0,57,731	0/0:12,0:12:27.09:0,27,353
chr10	80395878	.	AC	A	10612.45	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=11.860;DP=472;FS=8.231;HRun=3;HaplotypeScore=71.0944;InbreedingCoeff=0.9955;MQ=74.37;MQ0=0;MQRankSum=-2.815;QD=34.23;ReadPosRankSum=1.544;VQSLOD=5.3237;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:15.05:0,15,210	1/1:0,13:13:33.10:409,33,0	0/0:9,0:9:24.07:0,24,321	0/0:11,0:11:26.99:0,27,310	1/1:1,23:24:69.22:855,69,0	0/0:17,0:17:45.15:0,45,648	0/0:13,0:13:39.13:0,39,561	1/1:0,28:28:84.26:1041,84,0	0/0:17,1:18:16.99:0,17,697	1/1:0,12:12:36.10:433,36,0	1/1:0,22:22:66.21:817,66,0	0/0:18,0:18:54.17:0,54,758	0/0:23,0:23:69.22:0,69,972	0/0:14,0:14:39.13:0,39,561	1/1:0,18:18:42.13:521,42,0	1/1:0,13:13:36.11:446,36,0	1/1:0,17:17:42.13:521,42,0	1/1:1,10:11:27.08:335,27,0	1/1:1,19:20:57.16:680,57,0	1/1:0,14:14:39.05:464,39,0	1/1:0,13:13:33.10:409,33,0	0/0:11,0:11:33.11:0,33,474	0/0:11,0:11:30.10:0,30,423	0/0:12,0:12:36.12:0,36,518	1/1:0,23:23:63.20:781,63,0	1/1:0,22:22:66.21:818,66,0	1/1:1,35:36:96.30:1190,96,0	1/1:0,24:24:72.23:892,72,0
chr10	80395897	.	TAAACA	T	156.77	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.709;DP=480;FS=0.000;HRun=0;HaplotypeScore=148.2439;InbreedingCoeff=0.9498;MQ=75.51;MQ0=0;MQRankSum=-1.582;QD=31.35;ReadPosRankSum=-0.582;VQSLOD=3.3107;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:12.04:243,12,0	0/0:15,0:15:45.15:0,45,1067	0/0:16,0:16:48.16:0,48,1529	0/0:6,0:6:15.02:0,15,371	0/0:24,0:24:68.64:0,69,1511	0/0:22,0:22:66.20:0,66,1540	0/0:11,0:11:33.10:0,33,991	0/0:36,0:36:99:0,108,2234	0/0:16,0:16:48.16:0,48,1571	0/0:14,0:14:42.06:0,42,915	0/0:25,0:25:69.22:0,69,1561	0/0:16,0:16:48.16:0,48,1588	0/0:23,0:23:69.24:0,69,1627	0/0:13,0:13:39.12:0,39,861	0/0:15,0:15:42.14:0,42,981	0/0:13,0:13:36.12:0,36,838	0/0:17,0:17:45.15:0,45,1079	0/0:16,0:16:45.15:0,45,957	0/0:18,0:18:49.11:0,49,1113	0/0:12,0:12:36.12:0,36,863	0/0:14,0:14:39.13:0,39,882	0/0:16,0:16:48.15:0,48,1521	0/0:8,0:8:24.08:0,24,704	0/0:10,0:10:30.10:0,30,945	0/0:19,0:19:57.20:0,57,1365	0/0:21,0:21:63.22:0,63,1400	0/0:35,0:35:99:0,99,2206	0/0:24,0:24:72.25:0,72,1728
chr10	80396716	.	TA	T	747.53	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.089;DP=497;FS=1.499;HRun=8;HaplotypeScore=47.1983;InbreedingCoeff=0.9561;MQ=78.30;MQ0=0;MQRankSum=-1.566;QD=19.17;ReadPosRankSum=1.239;VQSLOD=3.2985;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:48.07:463,48,0	0/0:5,0:5:12.04:0,12,145	0/0:11,0:11:21.06:0,21,246	0/0:12,0:12:12.04:0,12,143	0/0:32,0:32:93.27:0,93,1111	1/1:2,15:17:42.07:406,42,0	0/0:12,0:12:36.09:0,36,413	0/0:22,0:22:51.16:0,51,616	0/0:13,0:13:39.12:0,39,471	0/0:14,0:14:42.13:0,42,505	0/0:28,0:28:78.24:0,78,942	0/0:7,0:7:21.06:0,21,254	0/0:15,1:16:19.16:0,19,505	0/0:14,0:14:42.12:0,42,493	0/0:18,0:18:51.15:0,51,606	0/0:17,0:17:51.12:0,51,584	0/0:15,0:15:45.14:0,45,542	0/0:16,0:16:45.10:0,45,525	0/0:20,0:20:51.16:0,51,616	0/0:28,0:28:81.25:0,81,978	0/0:8,0:8:21.06:0,21,254	0/0:16,0:16:42.13:0,42,507	0/0:15,0:15:36.11:0,36,435	0/0:6,0:6:18.06:0,18,217	0/0:21,0:21:54.17:0,54,652	0/0:28,0:28:81.25:0,81,979	0/0:41,0:41:99:0,117,1409	0/0:23,0:23:69.21:0,69,828
chr10	80396813	.	A	ATT	840.52	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.582;DP=554;FS=1.855;HRun=7;HaplotypeScore=69.8853;InbreedingCoeff=0.8952;MQ=75.51;MQ0=0;MQRankSum=-0.341;QD=31.13;ReadPosRankSum=1.673;VQSLOD=3.6297;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:93.24:0,93,1071	0/0:8,0:8:24.06:0,24,269	0/0:15,0:15:44.92:0,45,501	0/0:13,0:13:22.82:0,23,274	0/0:23,0:23:57.14:0,57,652	1/1:2,25:27:57.19:935,57,0	0/0:21,0:21:60.16:0,60,689	0/0:31,0:31:74.86:0,75,856	0/0:13,0:13:36.09:0,36,408	0/0:26,0:25:72.18:0,72,823	0/0:16,0:16:39.10:0,39,452	0/0:21,0:21:57.15:0,57,654	0/0:21,0:21:57.11:0,57,630	0/0:19,0:19:51.11:0,51,573	0/0:25,0:25:75.21:0,75,863	0/0:21,0:21:51.08:0,51,551	0/0:15,0:15:36.08:0,36,408	0/0:9,0:9:17.79:0,18,209	0/0:18,0:18:48.11:0,48,533	0/0:25,0:25:69.19:0,69,801	0/0:17,0:17:51.14:0,51,583	0/0:9,0:9:24.05:0,24,266	0/0:10,0:10:6.20:0,6,248	0/0:27,0:27:75.21:0,75,874	0/0:15,0:15:39.11:0,39,454	0/0:28,0:28:66.16:0,66,760	0/0:30,0:28:84.17:0,84,940	0/0:14,0:14:36.07:0,36,405
chr10	80397310	.	AT	A	2654.04	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=6.817;DP=247;FS=42.090;HRun=10;HaplotypeScore=40.7691;InbreedingCoeff=0.8231;MQ=75.83;MQ0=0;MQRankSum=-0.469;QD=18.30;ReadPosRankSum=1.717;VQSLOD=1.5538;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:21:182,21,0	1/1:2,3:5:9:78,9,0	0/0:12,0:10:4.77:0,5,62	0/0:4,0:4:3.01:0,3,33	1/1:3,7:10:14.98:130,15,0	0/0:7,0:7:12.03:0,12,133	0/0:11,0:11:28.31:0,28,294	1/1:2,21:23:62.97:543,63,0	0/0:15,0:16:35.93:0,36,377	1/1:2,7:9:20.99:182,21,0	1/1:1,9:10:23.98:208,24,0	0/0:20,0:20:48.12:0,48,521	1/1:0,1:1:3:26,3,0	1/1:0,2:2:6:52,6,0	1/1:1,6:6:15:130,15,0	1/1:2,2:4:6:52,6,0	1/1:3,5:6:5.99:52,6,0	1/1:0,4:4:9:78,9,0	1/1:1,9:10:23.98:208,24,0	1/1:2,8:10:20.98:182,21,0	1/1:1,5:6:11.99:104,12,0	0/0:9,0:9:27.07:0,27,299	0/0:14,1:15:13.05:0,13,371	0/0:8,0:8:18.05:0,18,199	1/1:1,4:5:9:78,9,0	1/1:1,6:7:17.96:151,18,0	1/1:0,12:12:35.99:312,36,0	1/1:0,4:4:12:104,12,0
chr10	80397343	.	T	TTAA	1497.38	PASS	AB=1.000;AC=33;AF=0.660;AN=50;BaseQRankSum=8.685;DP=212;FS=18.446;HRun=0;HaplotypeScore=73.3128;InbreedingCoeff=0.6829;MQ=54.99;MQ0=3;MQRankSum=-7.238;QD=12.80;ReadPosRankSum=-2.264;VQSLOD=1.3789;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:3.60:87,4,0	1/1:1,2:3:8.99:135,9,0	0/0:6,0:6:11.69:0,12,77	0/0:6,0:5:2.18:0,2,50	1/1:8,3:10:14.85:115,15,0	1/1:4,3:7:9.03:135,9,0	0/0:13,0:13:32.78:0,33,320	1/1:19,0:18:26.73:186,27,0	0/0:17,0:17:29.93:0,30,345	1/1:6,0:6:2.96:19,3,0	1/1:6,1:6:9:108,9,0	0/0:20,0:20:44.75:0,45,452	./.	1/1:3,0:3:5.94:45,6,0	1/1:3,1:3:3.01:58,3,0	./.	1/1:6,1:4:11.89:133,12,0	0/1:5,0:5:9.04:38,0,9	1/1:6,0:5:11.88:81,12,0	1/1:9,0:9:11.94:94,12,0	./.	0/0:10,0:10:21.01:0,21,228	0/0:10,0:10:20.30:0,20,167	0/0:10,0:10:14.68:0,15,144	1/1:3,0:3:2.98:22,3,0	1/1:5,2:6:11.99:175,12,0	1/1:6,2:8:17.96:208,18,0	1/1:2,0:2:5.95:42,6,0
chr10	80398422	.	A	AAAGTAGAT	912.87	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.541;DP=621;FS=28.403;HRun=0;HaplotypeScore=184.0907;InbreedingCoeff=0.9921;MQ=74.13;MQ0=0;MQRankSum=-3.908;QD=76.07;ReadPosRankSum=-0.780;VQSLOD=2.0956;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.18:0,57,1543	0/0:9,0:9:27.09:0,27,764	0/0:14,0:14:30.77:0,31,799	0/0:9,0:9:23.50:0,24,358	0/0:36,0:36:99:0,105,2856	1/1:3,7:12:24.08:1006,24,0	0/0:21,0:21:60.19:0,60,1581	0/0:33,0:33:90.28:0,90,2270	0/0:24,0:24:69.21:0,69,1811	0/0:32,0:32:96.32:0,96,2610	0/0:28,0:28:81.26:0,81,2060	0/0:20,0:20:57.19:0,57,1485	0/0:27,0:27:78.23:0,78,1994	0/0:23,0:23:66.21:0,66,1775	0/0:21,0:21:57.18:0,57,1543	0/0:21,0:21:60.19:0,60,1630	0/0:23,0:23:69.24:0,69,1953	0/0:9,0:9:24.05:0,24,579	0/0:20,0:20:48.11:0,48,1107	0/0:29,0:29:81.27:0,81,2186	0/0:19,0:19:57.20:0,57,1591	0/0:22,0:22:63.22:0,63,1783	0/0:29,0:29:78.26:0,78,2115	0/0:24,0:23:63.11:0,63,1514	0/0:22,0:22:60.18:0,60,1547	0/0:26,0:26:69.22:0,69,1861	0/0:35,0:35:99:0,102,2642	0/0:13,0:13:39.13:0,39,1104
chr10	80398777	.	GGTGTGT	G	2538.69	PASS	AB=0.902;AC=31;AF=0.596;AN=52;BaseQRankSum=4.321;DP=619;FS=5.485;HRun=0;HaplotypeScore=134.0723;InbreedingCoeff=0.4325;MQ=66.44;MQ0=15;MQRankSum=-5.292;QD=7.19;ReadPosRankSum=1.693;VQSLOD=2.2584;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:35:17.18:0,17,256	1/1:6,3:8:3.01:60,3,0	./.	./.	1/1:23,10:34:11.62:182,12,0	0/1:14,3:17:23.84:72,0,24	0/0:20,0:21:24:0,24,526	0/1:18,0:16:13.94:14,0,14	0/0:14,0:16:17.94:0,18,520	0/1:20,7:26:27.82:218,0,28	1/1:11,5:18:19.83:277,20,0	0/0:13,0:13:15.05:0,15,407	1/1:14,4:18:1.09:57,1,0	1/1:15,8:24:5.94:102,6,0	1/1:9,8:17:20.99:336,21,0	1/1:13,10:23:11.95:241,12,0	0/1:27,0:27:29.62:94,0,30	0/1:16,3:19:6.74:55,0,7	1/1:10,0:9:3:27,3,0	1/1:11,7:21:14.98:202,15,0	0/0:29,4:33:2.98:0,3,21	0/0:25,0:25:45.13:0,45,908	0/0:23,0:23:42.14:0,42,989	0/0:26,0:25:32.60:0,33,808	1/1:16,4:19:11.93:197,12,0	1/1:17,9:26:33.04:445,33,0	1/1:10,6:15:2.61:60,3,0	1/1:6,0:7:6.02:84,6,0
chr10	80398930	.	CAG	C	13381.42	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=4.491;DP=640;FS=0.000;HRun=0;HaplotypeScore=88.6668;InbreedingCoeff=0.9975;MQ=83.18;MQ0=0;MQRankSum=-2.751;QD=36.76;ReadPosRankSum=3.222;VQSLOD=6.8970;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.30:0,87,1555	1/1:0,5:5:15.05:210,15,0	0/0:21,0:21:59.55:0,60,968	0/0:22,0:22:57.19:0,57,946	1/1:1,16:17:42.14:583,42,0	0/0:18,0:18:48.16:0,48,851	0/0:20,0:20:57.20:0,57,1026	1/1:3,22:25:66.18:872,66,0	0/0:20,0:20:60.21:0,60,1075	1/1:2,18:20:54.17:739,54,0	1/1:3,14:17:36.12:504,36,0	0/0:24,0:24:63.22:0,63,1128	0/0:25,0:25:72.25:0,72,1280	0/0:29,0:29:81.28:0,81,1458	1/1:2,28:30:72.24:1008,72,0	1/1:0,25:25:69.23:966,69,0	1/1:2,22:24:60.20:840,60,0	1/1:3,14:17:39.13:546,39,0	1/1:1,22:23:63.16:826,63,0	1/1:2,29:31:87.29:1203,87,0	1/1:2,25:27:63.21:882,63,0	0/0:27,0:27:75.26:0,75,1336	0/0:16,0:16:48.16:0,48,864	0/0:23,0:23:69.24:0,69,1236	1/1:1,19:20:57.19:798,57,0	1/1:2,39:41:99:1680,120,0	1/1:1,33:34:99:1386,99,0	1/1:0,8:8:24.08:336,24,0
chr10	80398975	.	CCATCT	C	862.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.358;DP=592;FS=0.000;HRun=0;HaplotypeScore=132.7555;InbreedingCoeff=0.9758;MQ=86.72;MQ0=0;MQRankSum=-3.989;QD=53.93;ReadPosRankSum=1.806;VQSLOD=3.6115;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.26:0,75,2400	0/0:6,0:6:18.06:0,18,576	0/0:21,0:21:63.22:0,63,1891	0/0:19,0:19:48.16:0,48,1326	0/0:21,0:21:63.22:0,63,2020	1/1:1,15:16:45.15:958,45,0	0/0:19,0:19:54.19:0,54,1693	0/0:41,0:41:99:0,117,3633	0/0:26,0:26:78.25:0,78,2334	0/0:28,0:28:84.28:0,84,2643	0/0:19,0:19:57.20:0,57,1816	0/0:19,0:19:57.20:0,57,1776	0/0:15,0:15:42.11:0,42,1257	0/0:28,0:28:81.28:0,81,2587	0/0:31,0:30:84.27:0,84,2583	0/0:25,0:25:72.25:0,72,2265	0/0:21,0:21:57.20:0,57,1817	0/0:7,0:7:15.05:0,15,484	0/0:15,0:15:45.15:0,45,1334	0/0:16,0:16:45.14:0,45,1376	0/0:27,0:27:72.25:0,72,2265	0/0:29,0:29:87.30:0,87,2758	0/0:18,0:18:51.18:0,51,1646	0/0:21,0:21:63.22:0,63,2009	0/0:21,0:21:60.16:0,60,1799	0/0:25,0:25:75.26:0,75,2388	0/0:23,0:23:66.18:0,66,1891	0/0:9,0:9:27.09:0,27,871
chr10	80399188	.	G	GAA	338.73	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.252;DP=682;FS=2.289;HRun=0;HaplotypeScore=114.0208;InbreedingCoeff=0.9957;MQ=83.84;MQ0=0;MQRankSum=-5.491;QD=21.17;ReadPosRankSum=-0.001;VQSLOD=4.0996;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,150,2289	0/0:10,0:10:30.07:0,30,438	0/0:23,0:23:59.35:0,59,936	0/0:18,0:18:45.06:0,45,611	0/0:26,0:26:75.24:0,75,1195	1/1:5,11:16:24.62:432,25,0	0/0:27,0:27:81.16:0,81,1128	0/0:23,0:22:66.18:0,66,983	0/0:28,0:28:84.25:0,84,1317	0/0:21,0:21:63.18:0,63,972	0/0:20,0:20:54.13:0,54,826	0/0:23,0:23:69.22:0,69,1100	0/0:24,0:24:72.25:0,72,1173	0/0:42,0:42:99:0,123,1913	0/0:30,0:30:90.24:0,90,1344	0/0:25,0:25:75.21:0,75,1146	0/0:35,0:35:99:0,105,1583	0/0:18,0:18:54.18:0,54,877	0/0:19,0:19:54.12:0,54,809	0/0:19,0:19:57.15:0,57,854	0/0:36,0:36:99:0,99,1577	0/0:20,0:20:57.16:0,57,880	0/0:21,0:21:63.19:0,63,973	0/0:27,0:27:81.26:0,81,1295	0/0:21,0:21:57.14:0,57,853	0/0:19,0:19:57.18:0,57,884	0/0:33,0:33:96.26:0,96,1451	0/0:8,0:8:24.06:0,24,366
chr10	80399192	.	A	AAT	331.49	PASS	AB=0.607;AC=1;AF=0.018;AN=56;BaseQRankSum=5.768;DP=680;FS=2.507;HRun=0;HaplotypeScore=117.7669;InbreedingCoeff=0.0724;MQ=82.77;MQ0=0;MQRankSum=-5.229;QD=19.50;ReadPosRankSum=0.535;VQSLOD=3.5932;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,156,2419	0/0:8,0:8:24.08:0,24,391	0/0:21,0:21:60.20:0,60,946	0/0:17,0:17:48.10:0,48,692	0/0:27,0:27:81.25:0,81,1284	0/1:6,11:17:13.03:406,0,13	0/0:24,0:24:72.25:0,72,1152	0/0:25,0:24:75.23:0,75,1171	0/0:28,0:28:84.27:0,84,1340	0/0:20,0:20:60.17:0,60,947	0/0:19,0:19:54.18:0,54,869	0/0:23,0:23:69.21:0,69,1098	0/0:24,0:24:72.25:0,72,1175	0/0:44,0:44:99:0,129,2043	0/0:29,0:29:87.28:0,87,1377	0/0:25,0:25:72.25:0,72,1167	0/0:34,0:34:99:0,99,1587	0/0:19,0:19:57.15:0,57,900	0/0:20,0:20:57.19:0,57,911	0/0:18,0:18:54.17:0,54,850	0/0:36,0:36:99:0,99,1609	0/0:18,0:18:54.16:0,54,854	0/0:20,0:20:60.20:0,60,979	0/0:29,0:29:87.29:0,87,1393	0/0:20,0:20:54.17:0,54,852	0/0:20,0:20:57.19:0,57,920	0/0:33,0:33:93.32:0,93,1500	0/0:8,0:8:24.08:0,24,385
chr10	80399281	.	G	GA	399.97	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.861;DP=727;FS=1.165;HRun=1;HaplotypeScore=73.0915;InbreedingCoeff=0.9430;MQ=88.18;MQ0=0;MQRankSum=-1.015;QD=36.36;ReadPosRankSum=0.233;VQSLOD=3.8035;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,1852	0/0:8,0:8:24.08:0,24,312	0/0:29,0:29:84.25:0,84,1053	0/0:24,0:24:57.15:0,57,714	0/0:19,0:19:54.16:0,54,687	1/1:0,11:11:33.11:495,33,0	0/0:27,0:27:72.22:0,72,919	0/0:17,0:17:51.17:0,51,661	0/0:26,0:26:78.24:0,78,998	0/0:24,0:24:69.22:0,69,896	0/0:19,0:19:51.17:0,51,662	0/0:25,0:25:75.24:0,75,974	0/0:33,0:33:96.29:0,96,1230	0/0:27,0:27:78.25:0,78,1012	0/0:38,0:38:99:0,114,1480	0/0:37,0:37:99:0,105,1364	0/0:49,0:49:99:0,144,1869	0/0:25,0:25:65.98:0,66,856	0/0:27,0:27:78.25:0,78,1012	0/0:23,0:23:69.21:0,69,879	0/0:30,0:30:87.28:0,87,1130	0/0:29,0:29:87.27:0,87,1116	0/0:23,0:23:69.20:0,69,879	0/0:32,0:32:90.27:0,90,1151	0/0:12,0:12:33.11:0,33,428	0/0:21,0:21:63.20:0,63,818	0/0:40,0:40:99:0,117,1500	0/0:3,0:3:9.03:0,9,117
chr10	80400128	.	CAT	C	12119.27	PASS	AB=0.550;AC=36;AF=0.643;AN=56;BaseQRankSum=15.011;DP=521;FS=10.781;HRun=0;HaplotypeScore=109.4975;InbreedingCoeff=0.8807;MQ=68.76;MQ0=1;MQRankSum=-3.866;QD=31.56;ReadPosRankSum=1.675;VQSLOD=6.6244;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,11:13:27.09:355,27,0	1/1:3,7:10:21.07:276,21,0	0/0:9,0:9:24.08:0,24,402	0/0:10,0:9:17.95:0,18,309	1/1:5,36:41:87.28:1143,87,0	0/0:21,0:20:57.20:0,57,978	0/0:17,0:17:42.14:0,42,720	1/1:6,24:29:72.21:917,72,0	0/0:15,0:15:42.14:0,42,720	1/1:6,25:31:75.23:971,75,0	1/1:3,15:18:42.14:552,42,0	0/0:16,0:16:45.15:0,45,771	1/1:1,17:18:54.18:709,54,0	1/1:0,12:12:36.12:473,36,0	1/1:3,19:22:57.18:749,57,0	0/1:1,18:19:0.14:580,0,0	1/1:5,12:17:33.11:434,33,0	1/1:0,11:11:30.10:394,30,0	0/1:5,12:17:12.30:403,0,12	1/1:1,25:26:63.20:828,63,0	1/1:1,11:12:15.05:197,15,0	0/0:16,0:16:42.14:0,42,720	0/0:22,0:22:57.20:0,57,974	0/0:11,0:11:30.10:0,30,514	1/1:0,24:24:63.20:828,63,0	1/1:1,27:28:81.25:1051,81,0	1/1:1,19:20:54.18:709,54,0	1/1:1,14:15:42.14:552,42,0
chr10	80400531	.	ACCC	A	6382.80	PASS	AB=0.609;AC=30;AF=0.536;AN=56;BaseQRankSum=17.825;DP=531;FS=4.959;HRun=3;HaplotypeScore=142.4822;InbreedingCoeff=0.4199;MQ=88.80;MQ0=0;MQRankSum=-16.519;QD=19.88;ReadPosRankSum=4.772;VQSLOD=1.9169;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:2.99:23,3,0	1/1:2,7:9:19.17:187,19,0	0/0:31,0:31:57.74:0,58,1923	0/0:26,0:26:69.62:0,70,1350	0/1:6,29:35:40.11:531,0,40	0/0:20,0:20:60.17:0,60,1375	0/0:13,0:13:39.13:0,39,934	0/1:17,15:32:67.86:536,0,68	0/0:21,0:21:63.22:0,63,1480	1/1:4,24:28:22.92:680,23,0	1/1:6,18:24:10.70:447,11,0	0/0:21,0:21:63.22:0,63,1506	0/1:5,9:14:50.10:229,0,50	1/1:4,11:15:5.74:299,6,0	1/1:1,17:18:40.32:471,40,0	1/1:1,14:15:8.98:359,9,0	0/1:1,3:4:5.06:50,0,5	1/1:0,4:4:12.03:127,12,0	0/1:4,7:11:6.97:145,0,7	1/1:5,18:23:23.50:520,24,0	0/1:3,9:12:54.65:178,0,55	0/0:27,0:27:81.26:0,81,1863	0/0:26,0:26:78.27:0,78,1864	0/0:25,0:25:75.26:0,75,1821	1/1:3,20:23:63.58:632,64,0	1/1:5,14:19:20.07:413,20,0	0/1:5,14:19:66:384,0,66	0/1:7,5:12:2.95:172,0,3
chr10	80400535	.	TTC	T	4917.13	PASS	AB=0.595;AC=26;AF=0.481;AN=54;BaseQRankSum=18.120;DP=521;FS=4.949;HRun=0;HaplotypeScore=135.6889;InbreedingCoeff=0.2517;MQ=88.74;MQ0=0;MQRankSum=-16.601;QD=16.02;ReadPosRankSum=4.922;VQSLOD=4.5932;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,7:7:17.94:141,18,0	0/0:31,0:31:78.80:0,79,1697	0/0:25,0:25:71.48:0,71,1289	0/1:6,29:35:62.19:384,0,62	0/0:19,0:19:57.20:0,57,1156	0/0:13,0:13:39.13:0,39,792	0/1:14,15:29:82.39:441,0,82	0/0:20,0:20:60.20:0,60,1175	1/1:5,24:29:2.48:525,2,0	0/1:5,18:23:2.82:323,0,3	0/0:23,0:23:69.24:0,69,1400	0/1:2,9:11:21.89:174,0,22	0/1:3,11:14:3.09:217,0,3	1/1:2,17:19:34.58:383,35,0	1/1:1,14:15:1.45:263,1,0	0/1:1,3:4:11.70:37,0,12	1/1:0,4:4:11.98:99,12,0	0/1:5,7:12:20.39:136,0,20	1/1:5,18:23:29.70:407,30,0	0/1:4,9:13:30.88:162,0,31	0/0:26,0:26:78.25:0,78,1514	0/0:29,0:29:87.28:0,87,1729	0/0:26,0:26:78.25:0,78,1529	1/1:2,20:22:55.92:472,56,0	1/1:2,14:16:26.38:323,26,0	0/1:5,14:19:54.39:312,0,54	0/1:7,5:12:17.04:119,0,17
chr10	80400536	.	TC	T	3787.35	PASS	AB=1.000;AC=34;AF=0.630;AN=54;BaseQRankSum=17.228;DP=521;FS=4.550;HRun=3;HaplotypeScore=131.6937;InbreedingCoeff=0.7995;MQ=91.16;MQ0=0;MQRankSum=-16.698;QD=12.38;ReadPosRankSum=2.693;VQSLOD=2.5008;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:7,0:7:13.26:94,13,0	0/0:33,0:33:87.72:0,88,1189	0/0:26,0:26:63.61:0,64,879	0/1:34,0:34:24.25:244,0,24	0/0:19,0:19:57.18:0,57,801	0/0:13,0:13:39.13:0,39,561	1/1:25,3:28:49.54:379,50,0	0/0:20,0:20:60.19:0,60,845	1/1:27,1:28:41.12:426,41,0	1/1:24,0:24:30.54:278,31,0	0/0:23,0:23:69.22:0,69,976	1/1:11,0:11:8.12:125,8,0	1/1:14,0:14:31.94:180,32,0	1/1:18,1:19:29.65:263,30,0	1/1:15,0:15:21.32:199,21,0	0/1:4,0:4:10.61:23,0,11	1/1:5,0:5:14.73:95,15,0	1/1:10,2:12:1.93:108,2,0	1/1:23,0:23:36.01:291,36,0	1/1:12,1:13:23.35:147,23,0	0/0:24,0:24:72.24:0,72,1035	0/0:29,0:29:84.28:0,84,1206	0/0:26,0:26:75.24:0,75,1062	1/1:22,0:22:58.17:340,58,0	1/1:16,0:16:24.31:227,24,0	1/1:19,0:19:44.01:278,44,0	1/1:12,0:12:17.05:90,17,0
chr10	80400684	.	TAAAAG	T	16839.16	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=16.918;DP=543;FS=13.486;HRun=0;HaplotypeScore=151.2401;InbreedingCoeff=0.9813;MQ=71.34;MQ0=0;MQRankSum=-16.939;QD=47.84;ReadPosRankSum=0.280;VQSLOD=4.6629;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,4:6:12.04:247,12,0	1/1:0,9:9:27.09:557,27,0	0/0:20,0:20:57.18:0,57,1654	0/0:13,0:13:28.85:0,29,689	1/1:3,33:36:87.28:1730,87,0	0/0:19,0:19:51.15:0,51,1482	0/0:17,0:17:51.18:0,51,1557	1/1:6,33:39:81.39:1531,81,0	0/0:25,0:25:63.22:0,63,1952	1/1:3,18:21:53.53:1113,54,0	1/1:0,21:21:60.21:1215,60,0	0/0:27,0:27:81.28:0,81,2511	1/1:4,9:13:25.31:552,25,0	1/1:4,12:16:39.13:800,39,0	1/1:1,14:15:33.11:678,33,0	1/1:6,11:17:39:713,39,0	1/1:3,3:6:10.21:201,10,0	1/1:3,7:10:18.06:372,18,0	1/1:4,9:13:33.06:603,33,0	1/1:4,37:41:99:2316,116,0	1/1:0,7:7:12.04:247,12,0	0/0:28,0:28:75.26:0,75,2325	0/0:29,0:29:84.29:0,84,2597	0/0:13,0:13:36.12:0,36,1114	1/1:5,11:16:37.26:721,37,0	1/1:2,17:19:51.15:1013,51,0	1/1:2,33:35:82.64:1720,83,0	1/1:1,11:12:27.04:511,27,0
chr10	80401851	.	GATAGAC	G	256.72	PASS	AB=1.000;AC=7;AF=0.88;AN=8;DP=259;FS=0.000;HRun=0;HaplotypeScore=47.3154;MQ=16.61;MQ0=190;QD=5.03;VQSLOD=1.0332;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:4,4:4:12.04:226,12,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/1:20,0:13:0:0,0,0	./.	1/1:8,5:6:3.01:68,3,0	1/1:10,0:1:3:28,3,0	./.	./.
chr10	80401855	.	GAC	G	147.60	PASS	AC=6;AF=0.75;AN=8;DP=260;FS=0.000;HRun=0;HaplotypeScore=47.0716;MQ=15.96;MQ0=195;QD=4.47;VQSLOD=1.4814;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:7,2:4:12.02:142,12,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/0:22,0:13:0:0,0,0	./.	1/1:12,2:6:3:25,3,0	1/1:7,3:1:3.01:46,3,0	./.	./.
chr10	80401899	.	GATCGATAGAC	G	136.02	PASS	AB=0.909;AC=7;AF=0.583;AN=12;DP=199;FS=0.000;HRun=0;HaplotypeScore=30.6610;MQ=12.80;MQ0=165;QD=2.57;VQSLOD=1.0043;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:5,1:1:3.01:100,3,0	0/0:7,3:6:0:0,0,0	./.	./.	./.	./.	./.	./.	1/1:2,0:1:3.01:99,3,0	./.	0/1:5,3:3:0:0,0,0	./.	0/1:19,0:8:0:0,0,0	0/1:18,0:13:0:0,0,0	./.	./.	./.	./.	./.
chr10	80402011	.	GATAGATAGACAGAC	G	124.42	PASS	AB=0.875;AC=3;AF=0.75;AN=4;DP=322;FS=0.000;HRun=0;HaplotypeScore=48.3905;MQ=10.47;MQ0=275;QD=3.27;VQSLOD=1.0820;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:15,2:2:6.02:185,6,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/1:18,3:13:0:0,0,0	./.	./.	./.	./.	./.	./.	./.	./.
chr10	80402697	.	G	GAT	349.61	PASS	AB=0.889;AC=5;AF=0.83;AN=6;BaseQRankSum=-0.212;DP=319;FS=0.000;HRun=0;HaplotypeScore=15.6776;MQ=13.60;MQ0=244;MQRankSum=1.344;QD=6.13;ReadPosRankSum=-0.919;VQSLOD=1.5802;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/1:19,3:10:99:141,0,151	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:17,0:7:2.04:6,2,0	./.	./.	./.	./.	./.	1/1:8,7:6:15.05:272,15,0	./.	./.
chr10	80402817	.	GAC	G	39.73	PASS	AB=1.000;AC=7;AF=0.500;AN=14;BaseQRankSum=1.221;DP=267;FS=0.000;HRun=0;HaplotypeScore=18.9669;MQ=18.69;MQ0=167;MQRankSum=-0.956;QD=1.17;ReadPosRankSum=-0.322;VQSLOD=0.6518;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,2:4:0.47:1,0,0	./.	./.	./.	0/0:15,0:3:0:0,0,0	0/1:8,0:1:0:0,0,0	./.	./.	0/0:15,0:4:11.75:0,12,148	./.	./.	0/0:9,2:10:0.88:0,1,2	./.	./.	./.	./.	1/1:2,2:3:6.02:84,6,0	./.	./.	./.	./.	./.	./.	./.	1/1:16,1:1:3:28,3,0	./.	./.
chr10	80402877	.	GAC	G	64.04	PASS	AB=0.895;AC=12;AF=0.500;AN=24;BaseQRankSum=0.978;DP=208;FS=0.000;HRun=0;HaplotypeScore=23.7504;InbreedingCoeff=0.3002;MQ=22.02;MQ0=99;MQRankSum=0.715;QD=1.00;ReadPosRankSum=0.566;VQSLOD=0.9817;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:0:0,0,0	./.	./.	./.	./.	0/1:9,0:3:0:0,0,0	0/1:9,0:3:0:0,0,0	0/1:16,0:4:2.62:3,0,44	./.	0/0:5,0:2:2:0,2,13	./.	./.	0/0:16,0:9:1.04:0,1,3	./.	./.	0/1:2,6:7:0.08:0,0,0	0/1:1,0:1:0:0,0,0	./.	1/1:4,1:4:10.25:63,10,0	0/1:6,2:6:0:0,0,0	./.	./.	./.	./.	./.	./.	1/1:2,4:6:3.01:46,3,0	1/1:2,0:2:3:28,3,0
chr10	80402889	.	TAGATAGAC	T	793.92	PASS	AB=0.929;AC=17;AF=0.607;AN=28;BaseQRankSum=0.382;DP=239;FS=0.000;HRun=0;HaplotypeScore=25.9638;InbreedingCoeff=0.3105;MQ=22.26;MQ0=118;MQRankSum=0.273;QD=7.09;ReadPosRankSum=0.273;VQSLOD=0.9813;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:5:0:0,0,0	./.	./.	./.	./.	0/0:8,0:3:0:0,0,0	0/1:8,0:3:0:0,0,0	1/1:14,12:12:33:401,33,0	./.	0/1:7,0:3:28.97:29,0,76	./.	./.	0/1:15,0:8:0:0,0,0	./.	1/1:2,3:4:2.92:17,3,0	0/1:8,0:7:0:0,0,0	0/1:1,1:1:0:0,0,0	./.	1/1:5,3:4:12.04:325,12,0	0/1:8,2:7:0:0,0,0	./.	./.	0/0:17,0:6:2.92:0,3,17	./.	./.	./.	1/1:6,2:6:1.25:3,1,0	1/1:4,2:4:5.95:101,6,0
chr10	80402895	.	GACAGAC	G	108.62	PASS	AB=0.936;AC=12;AF=0.462;AN=26;BaseQRankSum=3.399;DP=232;FS=0.000;HRun=0;HaplotypeScore=26.3902;InbreedingCoeff=0.2011;MQ=22.06;MQ0=116;MQRankSum=-1.317;QD=1.26;ReadPosRankSum=3.889;VQSLOD=0.8384;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:5:0.89:0,1,2	./.	./.	./.	./.	0/1:6,0:4:0:0,0,0	0/1:7,0:3:0:0,0,0	0/1:26,0:12:14.89:15,0,245	./.	0/0:7,0:3:9.03:0,9,123	./.	./.	0/1:14,0:7:0.07:0,0,0	./.	0/0:5,0:4:3.01:0,3,39	0/1:3,5:7:0:0,0,0	1/1:3,0:1:0.47:1,0,0	./.	1/1:8,0:4:10.79:75,11,0	./.	./.	./.	0/0:16,0:5:3.01:0,3,58	./.	./.	./.	1/1:5,3:6:3.01:74,3,0	0/1:6,0:4:27.01:31,0,27
chr10	80402931	.	CATAG	C	147.09	PASS	AB=0.817;AC=8;AF=0.308;AN=26;BaseQRankSum=-0.741;DP=298;FS=0.000;HRun=0;HaplotypeScore=39.6960;InbreedingCoeff=0.1793;MQ=23.64;MQ0=134;MQRankSum=0.365;QD=2.13;ReadPosRankSum=0.365;VQSLOD=1.2585;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:5,0:3:0:0,0,0	./.	./.	0/0:13,0:10:0:0,0,0	0/0:8,0:6:3.01:0,3,52	./.	./.	./.	0/1:7,3:8:11.97:82,0,12	./.	./.	./.	./.	0/0:7,1:6:0:0,0,0	0/0:8,0:7:0:0,0,0	./.	./.	0/0:9,0:5:3.01:0,3,57	./.	0/1:6,1:2:0:0,0,0	./.	0/1:15,2:6:0:0,0,0	0/0:21,0:7:0:0,0,1	./.	0/1:5,3:3:3.40:53,0,3	1/1:12,3:10:3.01:45,3,0	1/1:8,4:6:3.01:45,3,0
chr10	80403142	.	C	CAT	272.05	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=6.384;DP=420;FS=0.000;HRun=0;HaplotypeScore=98.2224;InbreedingCoeff=0.6178;MQ=47.50;MQ0=12;MQRankSum=-3.076;QD=9.72;ReadPosRankSum=1.192;VQSLOD=2.9972;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:75.17:0,75,1154	0/0:2,0:2:2.92:0,3,17	0/0:18,0:9:24.95:0,25,331	./.	0/0:11,0:10:6.02:0,6,95	0/0:20,0:20:35.93:0,36,435	0/0:23,0:23:63.18:0,63,996	0/0:28,0:27:72.11:0,72,908	0/0:11,0:11:24.08:0,24,380	0/0:11,0:11:23.75:0,24,368	0/0:4,0:3:2.80:0,3,13	0/0:16,0:15:36.12:0,36,575	1/1:8,3:10:7.59:187,8,0	1/1:10,7:17:14.09:192,14,0	0/0:19,0:18:29.63:0,30,346	0/0:10,0:10:20.70:0,21,271	0/0:33,0:32:66.03:0,66,978	0/0:19,0:19:35.96:0,36,575	0/0:18,0:15:34.86:0,35,381	0/0:5,0:5:3.01:0,3,47	0/0:22,0:18:14.75:0,15,242	0/0:6,0:6:18.06:0,18,259	0/0:16,0:16:39.11:0,39,593	0/0:14,0:14:36.08:0,36,547	0/0:10,0:10:10.50:0,10,94	0/0:13,0:11:8.06:0,8,299	0/0:14,0:14:6.56:0,7,407	0/0:7,0:5:10.74:0,11,183
chr10	80403149	.	G	GCA	315.06	PASS	AB=0.961;AC=10;AF=0.179;AN=56;BaseQRankSum=5.241;DP=432;FS=15.982;HRun=0;HaplotypeScore=103.2690;InbreedingCoeff=-0.1366;MQ=51.92;MQ0=9;MQRankSum=-1.755;QD=2.46;ReadPosRankSum=-2.864;VQSLOD=0.5895;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:75.24:0,75,1118	0/0:2,0:2:2.90:0,3,16	0/0:19,0:11:27.08:0,27,381	0/1:7,0:2:6.31:6,0,40	0/0:11,0:10:6.02:0,6,92	0/0:23,0:23:33.11:0,33,464	0/0:25,0:25:72.13:0,72,1042	0/1:26,0:26:8.38:8,0,788	0/0:14,0:14:30.10:0,30,443	0/1:10,0:10:37.27:37,0,294	0/1:4,0:3:0:0,0,0	0/0:14,0:14:36.07:0,36,523	0/0:13,0:12:23.91:0,24,320	0/0:19,0:19:29.42:0,29,372	0/0:21,0:21:41.76:0,42,541	0/0:9,0:9:23.87:0,24,307	0/0:33,0:33:75.05:0,75,1053	0/1:16,3:19:99:116,0,558	0/1:15,0:12:3.72:4,0,424	0/0:7,0:7:6.01:0,6,71	0/0:28,0:24:29.74:0,30,398	0/0:9,0:9:27.09:0,27,396	0/0:17,0:17:36.12:0,36,540	0/0:10,0:10:27.06:0,27,387	0/1:6,3:9:33.83:161,0,34	0/1:14,0:12:55.40:55,0,306	0/1:15,0:15:21.91:22,0,414	0/1:9,0:7:34.88:35,0,243
chr10	80403409	.	C	CATTT	4801.15	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=9.322;DP=510;FS=5.918;HRun=0;HaplotypeScore=115.0684;InbreedingCoeff=0.8794;MQ=74.54;MQ0=2;MQRankSum=-7.103;QD=16.73;ReadPosRankSum=-3.522;VQSLOD=3.5919;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:78.19:0,78,1190	1/1:6,0:6:5.93:50,6,0	0/0:24,0:22:32.37:0,32,409	0/0:21,0:19:30.90:0,31,394	1/1:21,0:21:26.76:223,27,0	0/0:19,0:19:39.10:0,39,610	0/0:18,0:17:48.05:0,48,708	1/1:44,0:43:65.28:669,65,0	0/0:27,0:27:78.11:0,78,1064	1/1:19,0:19:19.30:252,19,0	1/1:8,0:8:7.94:127,8,0	0/0:33,0:33:87.14:0,87,1283	1/1:13,9:22:57.12:958,57,0	1/1:11,4:15:33.08:582,33,0	1/1:14,0:14:24.01:279,24,0	0/1:14,0:14:11.98:79,0,12	1/1:17,0:17:27.39:323,27,0	1/1:13,0:13:12.56:90,13,0	1/1:14,0:14:13.26:136,13,0	1/1:12,0:12:22.73:241,23,0	1/1:10,0:10:8.83:62,9,0	0/0:13,0:13:36.09:0,36,558	0/0:19,0:19:45.03:0,45,627	0/0:17,0:17:39.01:0,39,583	1/1:14,0:14:15.43:187,15,0	1/1:18,0:18:22.81:208,23,0	1/1:13,0:13:17.99:199,18,0	1/1:13,0:13:15.37:137,15,0
chr10	80403426	.	G	GTTTATTTA	4748.49	PASS	AB=0.937;AC=19;AF=0.339;AN=56;BaseQRankSum=9.224;DP=519;FS=22.512;HRun=0;HaplotypeScore=148.6469;InbreedingCoeff=-0.2368;MQ=57.04;MQ0=3;MQRankSum=-10.120;QD=16.60;ReadPosRankSum=0.732;VQSLOD=2.1378;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,2297	0/0:5,0:5:8.41:0,8,114	0/0:22,0:18:15.97:0,16,618	0/0:15,0:13:28.91:0,29,633	0/1:14,8:23:99:267,0,260	0/0:25,0:25:72.20:0,72,1725	0/0:20,0:19:51.16:0,51,1311	0/1:49,0:48:99:282,0,711	0/0:30,0:30:84.21:0,84,1930	0/1:14,0:14:99:359,0,265	0/1:10,0:10:99:181,0,146	0/0:29,0:29:78.24:0,78,2001	0/1:30,0:30:99:688,0,222	0/1:12,0:12:99:269,0,203	1/1:12,0:12:9.03:303,9,0	0/1:9,3:12:99:100,0,250	0/1:17,0:17:37.76:390,0,38	0/1:15,1:16:99:181,0,334	0/1:12,0:12:99:181,0,214	0/1:9,0:9:55.20:283,0,55	0/1:7,0:7:99:111,0,114	0/0:14,0:14:39.12:0,39,995	0/0:19,0:19:54.13:0,54,1208	0/0:19,0:19:54.04:0,54,1217	0/1:19,1:20:99:413,0,196	0/1:20,0:20:99:425,0,236	1/1:12,0:12:6.02:204,6,0	0/1:5,5:11:99:110,0,137
chr10	80403430	.	G	GTTTATTTATTTA	8142.76	PASS	AB=0.986;AC=35;AF=0.625;AN=56;BaseQRankSum=11.317;DP=511;FS=4.997;HRun=0;HaplotypeScore=170.6050;InbreedingCoeff=0.7327;MQ=56.96;MQ0=3;MQRankSum=-7.146;QD=26.61;ReadPosRankSum=-2.237;VQSLOD=3.7776;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,100,2693	1/1:5,0:5:11.34:84,11,0	0/1:21,0:18:4.58:5,0,627	0/0:15,0:13:19.64:0,20,492	1/1:20,1:21:29.78:461,30,0	0/0:26,0:26:78.18:0,78,2191	0/0:21,0:20:59.99:0,60,1319	1/1:48,0:47:81.47:931,81,0	0/0:28,0:28:72.18:0,72,2156	1/1:10,3:13:21.21:712,21,0	1/1:4,5:10:9.41:373,9,0	0/0:27,0:27:75.20:0,75,2253	0/1:29,0:29:99:305,0,132	0/1:12,0:12:99:112,0,216	1/1:0,7:11:9.03:531,9,0	1/1:10,0:10:17.94:242,18,0	1/1:2,14:18:12.04:708,12,0	1/1:16,0:16:12.26:336,12,0	1/1:5,3:11:16.70:401,17,0	1/1:6,3:9:23.65:622,24,0	1/1:6,0:6:12.43:328,12,0	0/0:13,0:13:36.11:0,36,1147	0/0:18,0:18:51.11:0,51,1470	0/0:19,0:19:51.11:0,51,1259	1/1:7,11:19:12.04:633,12,0	1/1:5,10:22:37.27:812,37,0	1/1:0,7:13:6.02:356,6,0	1/1:11,0:11:11.87:191,12,0
chr10	80403434	.	G	GTTTA	3929.90	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=12.288;DP=487;FS=2.903;HRun=0;HaplotypeScore=111.3683;InbreedingCoeff=0.8608;MQ=57.12;MQ0=3;MQRankSum=-8.930;QD=14.56;ReadPosRankSum=-0.768;VQSLOD=3.0128;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:90.05:0,90,1209	1/1:6,0:6:5.92:39,6,0	0/0:20,0:17:13.15:0,13,284	0/0:14,0:12:18.04:0,18,223	1/1:19,0:19:20.96:236,21,0	0/0:26,0:26:72.14:0,72,989	0/0:22,0:21:41.73:0,42,544	1/1:47,0:46:56.11:461,56,0	0/0:23,0:23:60.16:0,60,912	1/1:14,0:14:15.05:224,15,0	1/1:9,0:9:6.02:105,6,0	0/0:25,0:25:60.16:0,60,930	1/1:7,23:32:33.11:760,33,0	1/1:8,4:12:27.07:447,27,0	1/1:8,0:8:9.03:157,9,0	1/1:11,0:11:3.01:53,3,0	1/1:15,0:15:15.05:262,15,0	1/1:16,0:16:11.25:96,11,0	1/1:9,0:9:9.02:122,9,0	1/1:9,0:9:9.03:157,9,0	1/1:5,0:5:5.93:70,6,0	0/0:13,0:13:33.08:0,33,500	0/0:19,0:19:48.10:0,48,671	0/0:17,0:17:36.05:0,36,490	1/1:18,0:18:12.04:213,12,0	1/1:16,0:16:25.36:329,25,0	1/1:11,0:11:6.02:104,6,0	1/1:13,0:13:8.97:95,9,0
chr10	80403942	.	G	GA	19054.44	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=0.857;DP=588;FS=0.352;HRun=0;HaplotypeScore=119.1445;InbreedingCoeff=0.9875;MQ=63.99;MQ0=1;MQRankSum=-11.783;QD=43.60;ReadPosRankSum=2.976;VQSLOD=4.2760;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:81.28:1289,81,0	1/1:1,10:11:30.10:477,30,0	0/0:24,2:23:59.38:0,59,817	0/0:18,0:17:40.02:0,40,565	1/1:2,22:24:63.20:975,63,0	1/1:0,21:21:57.19:909,57,0	0/0:14,0:14:42.14:0,42,586	1/1:5,23:28:81.14:1177,81,0	0/0:21,0:21:60.19:0,60,819	1/1:3,17:20:60.15:923,60,0	1/1:0,22:22:66.22:1043,66,0	0/0:12,0:12:33.10:0,33,445	1/1:0,27:27:75.26:1197,75,0	1/1:0,25:25:69.24:1101,69,0	1/1:2,31:33:99:1513,99,0	1/1:2,24:26:36.31:1116,36,0	1/1:2,20:22:60.07:884,60,0	1/1:1,14:15:45.01:616,45,0	1/1:3,11:14:42.06:593,42,0	1/1:3,24:27:36.36:1147,36,0	1/1:0,5:5:14.98:208,15,0	0/0:25,0:25:75.22:0,75,1012	0/0:14,0:14:42.14:0,42,585	0/0:20,1:21:57.17:0,57,775	1/1:3,23:26:72.18:1089,72,0	1/1:1,26:27:81.19:1233,81,0	1/1:1,29:31:90.31:1421,90,0	1/1:0,3:3:9.03:143,9,0
chr10	80403961	.	AAAAAG	A	12640.58	PASS	AB=0.593;AC=30;AF=0.536;AN=56;BaseQRankSum=12.119;DP=592;FS=7.003;HRun=0;HaplotypeScore=190.1415;InbreedingCoeff=0.8494;MQ=69.37;MQ0=1;MQRankSum=-16.825;QD=39.63;ReadPosRankSum=1.710;VQSLOD=4.4391;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,2808	1/1:2,5:7:15.05:292,15,0	0/0:43,0:38:96.30:0,96,2115	0/0:22,0:21:35.10:0,35,687	1/1:5,21:26:56.82:749,57,0	0/0:21,0:21:48.14:0,48,1330	0/0:14,0:14:42.14:0,42,1208	1/1:8,23:31:78.13:1355,78,0	0/0:19,0:19:45.15:0,45,1218	1/1:1,10:11:33.11:613,33,0	1/1:1,24:25:66.14:1207,66,0	0/0:15,0:15:41.93:0,42,1130	0/0:25,0:25:63.20:0,63,1701	0/0:25,0:25:66.19:0,66,1729	1/1:12,14:26:54.14:979,54,0	0/1:5,17:22:26.92:1010,0,27	1/1:7,16:23:45.08:788,45,0	1/1:8,6:14:26.97:413,27,0	1/1:2,12:14:36.01:554,36,0	0/1:9,14:23:16.16:740,0,16	1/1:2,3:5:14.92:169,15,0	0/0:19,0:19:47.97:0,48,1196	0/0:17,0:17:42.14:0,42,1144	0/0:16,0:16:39.06:0,39,1062	1/1:5,25:30:66.09:1138,66,0	1/1:4,21:25:63.22:1226,63,0	1/1:6,24:30:66.13:1175,66,0	1/1:0,7:7:12.04:233,12,0
chr10	80403969	.	AAG	A	3122.92	PASS	AB=0.974;AC=19;AF=0.339;AN=56;BaseQRankSum=17.112;DP=572;FS=0.315;HRun=0;HaplotypeScore=180.3535;InbreedingCoeff=0.0522;MQ=70.29;MQ0=1;MQRankSum=-16.388;QD=10.27;ReadPosRankSum=6.136;VQSLOD=3.0988;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1760	0/1:7,0:7:6.58:67,0,7	0/0:41,0:36:51.96:0,52,1260	0/0:22,0:21:24.60:0,25,500	0/1:23,2:25:99:143,0,199	0/0:20,0:20:51.15:0,51,854	0/0:17,0:17:51.14:0,51,826	1/1:25,3:28:9.83:373,10,0	0/0:17,0:17:51.13:0,51,800	0/1:14,1:15:29.45:176,0,29	0/1:27,0:27:36.57:274,0,37	0/0:18,0:18:53.96:0,54,851	0/0:23,0:23:66.20:0,66,1065	0/0:26,0:26:72.19:0,72,1142	0/1:21,0:21:9.54:278,0,10	0/1:22,0:22:34.12:273,0,34	0/1:19,1:20:4.17:209,0,4	0/1:13,1:14:33.96:136,0,34	0/1:15,0:15:21.46:144,0,21	0/1:18,1:19:36.40:230,0,36	0/1:6,0:6:29.32:33,0,29	0/0:19,0:19:57.17:0,57,901	0/0:15,0:15:45.14:0,45,724	0/0:13,0:13:39.13:0,39,670	0/1:26,1:27:0.14:295,0,0	0/1:25,0:25:32.68:294,0,33	1/1:26,0:26:13.02:304,13,0	1/1:7,0:7:11.75:70,12,0
chr10	80404516	.	C	CTTT	11583.52	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-6.036;DP=645;FS=3.112;HRun=11;HaplotypeScore=104.7166;InbreedingCoeff=0.9176;MQ=71.28;MQ0=0;MQRankSum=-2.265;QD=28.46;ReadPosRankSum=-4.060;VQSLOD=3.3077;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:58.03:0,58,698	1/1:1,8:10:15.05:246,15,0	0/0:20,0:17:16.82:0,17,180	0/1:13,0:13:28.09:28,0,64	1/1:6,22:32:70.27:985,70,0	0/0:27,0:26:72.15:0,72,831	0/0:18,0:19:28.23:0,28,538	1/1:7,21:30:60.14:984,60,0	0/0:16,0:16:15.80:0,16,397	1/1:8,19:31:63.07:913,63,0	1/1:4,12:18:35.93:563,36,0	0/0:11,0:12:25.58:0,26,301	0/0:21,0:25:34.23:0,34,422	0/0:28,0:29:62.89:0,63,701	1/1:5,28:35:63.21:1143,63,0	1/1:3,8:13:18:253,18,0	1/1:5,12:19:24.04:384,24,0	1/1:1,11:12:20.49:394,20,0	1/1:8,21:36:84.14:1265,84,0	1/1:14,16:34:60.14:999,60,0	1/1:6,9:18:30.04:464,30,0	0/0:27,0:29:64.53:0,65,741	0/0:23,0:24:52.62:0,53,628	0/0:15,0:15:42.12:0,42,491	1/1:12,13:27:68.60:970,69,0	1/1:12,16:29:45.94:646,46,0	1/1:8,29:37:57.10:1043,57,0	1/1:5,7:12:21.03:303,21,0
chr10	80405428	.	ATGTT	A	19763.87	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=15.632;DP=633;FS=4.029;HRun=0;HaplotypeScore=114.5612;InbreedingCoeff=0.9304;MQ=79.72;MQ0=0;MQRankSum=-6.942;QD=49.53;ReadPosRankSum=0.479;VQSLOD=5.4971;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:66.23:1277,66,0	1/1:0,10:10:24.08:464,24,0	0/0:23,0:23:62.78:0,63,1488	0/1:11,0:11:9.53:10,0,477	1/1:1,31:32:75.22:1433,75,0	0/0:26,0:26:78.27:0,78,2090	0/0:16,0:16:42.14:0,42,1147	1/1:2,21:23:60.21:1162,60,0	0/0:21,0:21:60.21:0,60,1630	1/1:3,28:31:84.29:1627,84,0	1/1:2,23:25:66.23:1237,66,0	0/0:31,0:31:90.31:0,90,2458	0/0:22,0:22:63.22:0,63,1709	0/0:28,0:28:75.26:0,75,2048	1/1:2,28:30:81.28:1570,81,0	1/1:0,25:25:66.23:1278,66,0	1/1:1,16:17:48.16:911,48,0	1/1:0,8:8:21.07:406,21,0	1/1:2,16:18:48.14:838,48,0	1/1:0,38:38:99:2034,111,0	1/1:1,19:20:48.16:928,48,0	0/0:28,0:28:78.27:0,78,2117	0/0:28,0:28:84.29:0,84,2263	0/0:11,0:11:33.11:0,33,903	1/1:1,22:23:60.21:1162,60,0	1/1:1,28:29:84.29:1626,84,0	1/1:0,25:25:69.24:1337,69,0	1/1:0,11:11:24.08:465,24,0
chr10	80407702	.	A	AT	502.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.142;DP=606;FS=6.981;HRun=9;HaplotypeScore=59.4157;InbreedingCoeff=0.9128;MQ=66.32;MQ0=0;MQRankSum=-0.949;QD=17.95;ReadPosRankSum=0.212;VQSLOD=3.6140;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,23:28:54.15:597,54,0	0/0:20,0:20:50.98:0,51,442	0/0:12,0:9:6.64:0,7,141	0/0:11,0:11:29.98:0,30,256	0/0:28,0:28:80.98:0,81,702	0/0:13,0:13:35.99:0,36,312	0/0:19,0:19:44.95:0,45,382	0/0:39,0:39:80.93:0,81,698	0/0:15,0:15:41.99:0,42,365	0/0:23,0:23:50.96:0,51,441	0/0:17,0:17:44.99:0,45,391	0/0:18,0:18:47.98:0,48,417	0/0:21,0:21:54.46:0,54,470	0/0:14,0:14:35.99:0,36,312	0/0:24,0:24:59.98:0,60,521	0/0:21,0:21:32.66:0,33,438	0/0:21,0:21:53.97:0,54,468	0/0:32,0:32:77.34:0,77,658	0/0:22,0:22:53.98:0,54,469	0/0:30,1:31:56.54:0,57,704	0/0:9,0:9:26.99:0,27,234	0/0:24,0:24:62.94:0,63,538	0/0:41,0:41:99:0,111,948	0/0:13,0:13:35.99:0,36,313	0/0:17,0:17:44.97:0,45,387	0/0:27,0:27:77.89:0,78,667	0/0:30,0:29:57.53:0,58,649	0/0:16,0:16:35.98:0,36,313
chr10	80408676	.	CA	C	303.28	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=9.083;DP=680;FS=1.384;HRun=8;HaplotypeScore=65.5111;InbreedingCoeff=0.6983;MQ=76.66;MQ0=0;MQRankSum=1.196;QD=6.32;ReadPosRankSum=1.020;VQSLOD=0.3915;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:54.12:0,54,636	0/0:12,0:12:36.11:0,36,435	0/0:15,0:15:36.09:0,36,395	0/1:13,0:14:5.23:5,0,152	0/0:33,0:33:87.27:0,87,1051	1/1:34,0:34:38.96:397,39,0	0/0:16,0:16:45.14:0,45,540	0/0:34,0:35:93.14:0,93,1092	0/0:23,0:23:66.18:0,66,776	0/0:34,0:34:90.27:0,90,1079	0/0:25,0:25:72.22:0,72,870	0/0:28,0:28:78.24:0,78,942	0/0:38,0:38:99:0,105,1266	0/0:32,0:32:93.29:0,93,1122	0/0:32,1:33:61.24:0,61,993	0/0:17,0:17:45.13:0,45,534	0/0:21,1:22:31.21:0,31,660	0/0:13,0:13:30.09:0,30,360	0/0:20,0:20:54.16:0,54,642	0/0:22,0:22:57.13:0,57,662	0/0:20,2:22:28.18:0,28,611	0/0:30,0:30:81.20:0,81,958	0/0:29,0:29:81.24:0,81,966	0/0:19,0:19:48.15:0,48,580	0/0:33,1:34:67.32:0,67,1095	0/0:31,0:31:87.27:0,87,1051	0/0:22,0:22:48.15:0,48,578	0/0:5,0:5:15.05:0,15,181
chr10	80408684	.	AT	A	1089.18	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.038;DP=672;FS=0.637;HRun=1;HaplotypeScore=61.2921;InbreedingCoeff=0.9809;MQ=76.78;MQ0=0;MQRankSum=-3.274;QD=31.12;ReadPosRankSum=2.724;VQSLOD=3.3766;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.10:0,60,809	0/0:12,0:12:36.12:0,36,526	0/0:17,0:17:44.20:0,44,528	0/0:12,0:12:15.34:0,15,199	0/0:32,0:32:90.26:0,90,1272	1/1:1,34:35:87.18:1184,87,0	0/0:16,0:16:48.15:0,48,680	0/0:36,0:36:99:0,105,1426	0/0:23,0:23:69.22:0,69,988	0/0:33,0:33:96.30:0,96,1354	0/0:24,0:24:72.23:0,72,1030	0/0:27,0:27:81.25:0,81,1146	0/0:35,0:35:99:0,105,1505	0/0:32,0:32:96.29:0,96,1363	0/0:32,0:32:87.81:0,88,1234	0/0:15,0:15:45.15:0,45,658	0/0:24,0:24:63.73:0,64,899	0/0:13,0:13:30.10:0,30,435	0/0:21,0:21:63.17:0,63,864	0/0:22,0:22:66.17:0,66,886	0/0:20,0:20:51.74:0,52,764	0/0:28,0:28:81.25:0,81,1147	0/0:31,0:31:93.24:0,93,1279	0/0:18,0:18:51.16:0,51,726	0/0:34,0:34:96.88:0,97,1407	0/0:30,0:30:90.29:0,90,1282	0/0:22,0:22:66.06:0,66,820	0/0:7,0:7:21.03:0,21,264
chr10	80410921	.	A	ATT	397.49	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=-0.486;DP=463;FS=0.965;HRun=10;HaplotypeScore=63.5125;InbreedingCoeff=0.9226;MQ=75.21;MQ0=0;MQRankSum=0.353;QD=20.92;ReadPosRankSum=0.608;VQSLOD=2.6118;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:77.85:0,78,843	0/0:6,0:6:18.04:0,18,183	0/0:15,0:15:23.80:0,24,216	0/0:12,0:11:9.11:0,9,73	0/0:22,0:22:57.10:0,57,573	1/1:2,17:19:33.11:491,33,0	0/0:13,0:13:33.07:0,33,336	0/0:24,0:24:51.06:0,51,503	0/0:14,0:14:39.01:0,39,377	0/0:20,0:20:45.06:0,45,447	0/0:19,0:20:44.78:0,45,496	0/0:11,0:11:18:0,18,183	./.	./.	0/0:14,0:14:36.06:0,36,363	0/0:16,0:16:42.09:0,42,427	0/0:20,0:22:53.56:0,54,576	0/0:11,0:11:24.03:0,24,242	0/0:17,0:17:38.06:0,38,361	0/0:23,0:23:60.06:0,60,593	0/0:9,0:9:27.06:0,27,275	0/0:17,0:17:48.10:0,48,488	0/0:20,0:20:54.09:0,54,549	0/0:10,0:10:20.98:0,21,196	0/0:23,0:23:44.71:0,45,441	0/0:27,0:27:72.14:0,72,732	0/0:20,0:20:50.71:0,51,568	0/0:25,0:25:66.09:0,66,671
chr10	80411991	.	AT	A	93.67	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=4.338;DP=324;FS=0.000;HRun=7;HaplotypeScore=33.7682;InbreedingCoeff=0.8143;MQ=74.75;MQ0=0;MQRankSum=0.414;QD=10.41;ReadPosRankSum=-1.566;VQSLOD=0.1500;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.19:0,60,755	0/0:8,0:8:21.07:0,21,264	0/0:6,0:5:9.02:0,9,98	0/0:11,0:11:7.46:0,7,283	0/0:15,0:15:42.13:0,42,528	1/1:4,5:9:18.04:184,18,0	0/0:7,0:7:15.01:0,15,171	0/0:30,0:30:84.27:0,84,1057	0/0:7,0:7:18.06:0,18,226	0/0:16,0:16:42.13:0,42,519	0/0:11,0:11:33.11:0,33,415	0/0:10,0:10:27.09:0,27,340	./.	./.	0/0:9,0:9:27.09:0,27,340	0/0:10,0:10:30.10:0,30,377	0/0:26,0:26:75.23:0,75,929	0/0:6,0:6:18.06:0,18,226	0/0:14,0:14:39.12:0,39,491	0/0:15,0:15:42.13:0,42,528	0/0:11,0:11:30.05:0,30,337	0/0:6,0:6:15.05:0,15,189	0/0:9,0:9:24.05:0,24,286	0/0:5,0:5:15.05:0,15,189	0/0:15,0:15:42.13:0,42,528	0/0:12,0:12:36.12:0,36,453	0/0:26,0:26:66.21:0,66,830	0/0:9,0:9:24.08:0,24,302
chr10	80412087	.	GT	G	9863.19	PASS	AC=36;AF=0.692;AN=52;BaseQRankSum=9.961;DP=469;FS=4.809;HRun=7;HaplotypeScore=54.6346;InbreedingCoeff=0.9822;MQ=78.13;MQ0=0;MQRankSum=-1.808;QD=27.63;ReadPosRankSum=1.921;VQSLOD=5.6883;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:54.12:551,54,0	1/1:1,9:10:27.06:275,27,0	0/0:13,0:13:24.07:0,24,284	0/0:7,0:7:11.24:0,11,98	1/1:2,20:22:60.13:612,60,0	1/1:2,23:25:60.13:612,60,0	0/0:19,0:19:57.12:0,57,685	1/1:2,27:29:81.14:811,81,0	0/0:20,0:20:60.19:0,60,754	1/1:3,23:26:69.14:696,69,0	1/1:0,14:14:39.09:398,39,0	0/0:21,0:21:57.17:0,57,704	./.	./.	1/1:2,23:25:66.12:673,66,0	1/1:1,24:25:37.43:697,37,0	1/1:2,22:24:60.14:612,60,0	1/1:0,4:4:9.02:92,9,0	1/1:0,15:15:45.08:452,45,0	1/1:0,16:16:45.10:459,45,0	1/1:0,12:12:33.08:337,33,0	0/0:13,0:13:36.12:0,36,453	0/0:12,0:12:33.10:0,33,412	0/0:7,0:7:21.07:0,21,264	1/1:1,23:24:66.15:673,66,0	1/1:0,19:19:57.09:567,57,0	1/1:2,35:37:99:1040,102,0	1/1:0,10:10:30.07:306,30,0
chr10	80413183	.	CA	C	487.22	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=5.790;DP=486;FS=6.050;HRun=7;HaplotypeScore=46.2454;InbreedingCoeff=0.9624;MQ=64.67;MQ0=1;MQRankSum=-0.305;QD=22.15;ReadPosRankSum=0.980;VQSLOD=3.1427;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:57.13:581,57,0	0/0:7,0:7:21.07:0,21,264	0/0:10,0:6:15.05:0,15,189	0/0:7,0:7:15.03:0,15,168	0/0:24,0:24:72.23:0,72,905	0/0:21,0:21:60.14:0,60,723	0/0:8,0:8:24.08:0,24,302	0/0:37,0:37:90.26:0,90,1097	0/0:12,0:12:33.10:0,33,410	0/0:20,0:20:51.16:0,51,642	0/0:20,0:20:57.16:0,57,692	0/0:24,0:24:72.23:0,72,906	./.	./.	0/0:23,0:23:66.21:0,66,830	0/0:19,0:19:54.17:0,54,679	0/0:21,0:21:60.19:0,60,752	0/0:24,0:24:66.21:0,66,830	0/0:12,0:12:36.11:0,36,441	0/0:22,0:22:60.19:0,60,755	0/0:12,0:12:33.11:0,33,415	0/0:11,0:11:30.08:0,30,364	0/0:14,0:14:39.12:0,39,491	0/0:14,0:14:39.08:0,39,473	0/0:30,0:30:81.25:0,81,1007	0/0:26,0:26:69.22:0,69,868	0/0:29,0:28:87.28:0,87,1094	0/0:17,0:16:48.15:0,48,604
chr10	80417225	.	C	CATATAT	3520.14	PASS	AB=0.887;AC=32;AF=0.667;AN=48;BaseQRankSum=2.802;DP=227;FS=4.475;HRun=0;HaplotypeScore=71.3277;InbreedingCoeff=0.6314;MQ=72.67;MQ0=0;MQRankSum=-4.863;QD=22.86;ReadPosRankSum=-3.358;VQSLOD=2.2791;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:7:3.01:44,3,0	1/1:3,0:4:3.01:39,3,0	./.	./.	0/1:15,1:16:0:0,0,0	0/0:8,0:18:11.25:0,11,87	0/0:6,0:6:9.03:0,9,185	1/1:28,0:29:54.14:1266,54,0	0/0:4,0:4:6.02:0,6,116	1/1:7,0:7:9.03:219,9,0	0/1:4,0:5:0:0,0,0	0/0:9,0:9:21.07:0,21,438	./.	./.	1/1:5,1:6:6.02:157,6,0	1/1:6,2:9:3.01:101,3,0	1/1:8,2:11:9:160,9,0	1/1:1,2:3:6.02:183,6,0	1/1:7,0:8:15.04:264,15,0	1/1:4,6:10:3.01:101,3,0	1/1:9,1:10:6:65,6,0	0/0:4,0:4:6.01:0,6,75	0/0:8,0:8:21.07:0,21,389	0/0:10,0:10:24.08:0,24,518	1/1:4,0:4:3.01:51,3,0	1/1:8,1:9:15.04:375,15,0	1/1:9,2:11:17.79:439,18,0	1/1:5,0:5:3.01:57,3,0
chr10	80417237	.	TATACAC	T	1218.92	PASS	AB=0.862;AC=10;AF=0.208;AN=48;BaseQRankSum=-0.957;DP=179;FS=1.780;HRun=0;HaplotypeScore=70.6622;InbreedingCoeff=-0.1922;MQ=49.72;MQ0=1;MQRankSum=-3.190;QD=16.93;ReadPosRankSum=0.411;VQSLOD=2.5302;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:2.51:0,3,6	0/0:1,0:1:3.01:0,3,81	./.	./.	0/0:8,4:12:5.87:0,6,120	0/0:19,0:19:50.84:0,51,1123	0/0:3,0:3:9.03:0,9,315	0/1:21,7:28:99:666,0,605	0/0:3,0:3:6.02:0,6,206	0/1:3,1:4:73.60:74,0,92	0/0:5,1:6:2.94:0,3,84	0/0:9,0:9:27.09:0,27,717	./.	./.	0/0:3,0:3:3.01:0,3,64	0/0:7,0:7:12.04:0,12,269	0/0:10,0:10:1.45:0,1,139	0/1:4,0:4:50.91:51,0,105	0/1:5,2:7:97.79:98,0,396	0/0:5,0:5:3.01:0,3,67	0/1:9,0:9:14.96:15,0,139	0/0:2,0:2:6.01:0,6,75	0/0:7,0:7:21.07:0,21,590	0/0:9,0:9:27.09:0,27,793	0/1:3,1:4:42.13:42,0,136	0/1:4,1:5:99:125,0,145	0/1:7,1:8:99:220,0,118	1/1:3,0:3:3.01:57,3,0
chr10	80417239	.	TACAC	T	905.21	PASS	AB=0.920;AC=9;AF=0.188;AN=48;BaseQRankSum=0.370;DP=182;FS=0.828;HRun=0;HaplotypeScore=67.4440;InbreedingCoeff=-0.2937;MQ=49.56;MQ0=1;MQRankSum=-3.497;QD=12.23;ReadPosRankSum=-0.376;VQSLOD=2.9162;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:2.45:0,2,6	0/0:1,0:1:3.01:0,3,56	./.	./.	0/0:11,1:12:5.97:0,6,97	0/0:19,0:19:49.71:0,50,926	0/0:4,0:4:12.04:0,12,301	0/1:26,3:29:99:515,0,642	0/0:2,0:2:6.02:0,6,168	0/1:3,1:4:72.35:101,0,72	0/0:5,1:6:2.94:0,3,72	0/0:9,0:9:27.09:0,27,606	./.	./.	0/0:3,0:3:3.01:0,3,54	0/0:6,1:7:12.04:0,12,237	0/0:9,0:9:8.54:0,9,135	0/1:4,0:4:31.96:32,0,117	0/1:7,0:7:45.35:45,0,320	0/0:5,0:5:3.01:0,3,55	0/1:9,0:9:11.94:12,0,165	0/0:2,0:2:6.01:0,6,75	0/0:7,0:7:21.07:0,21,498	0/0:9,0:9:27.09:0,27,665	0/1:4,0:4:42.14:42,0,115	0/1:5,0:5:95.31:95,0,108	0/1:8,0:8:74.71:158,0,75	0/1:1,3:4:31.74:32,0,40
chr10	80417281	.	CAT	C	3143.33	PASS	AB=0.712;AC=31;AF=0.620;AN=50;BaseQRankSum=4.771;DP=205;FS=5.190;HRun=0;HaplotypeScore=50.7055;InbreedingCoeff=0.5451;MQ=61.71;MQ0=0;MQRankSum=0.315;QD=19.17;ReadPosRankSum=2.052;VQSLOD=3.3340;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:4:2.51:0,3,7	./.	0/0:3,0:2:3.48:0,3,41	0/0:7,0:5:8.63:0,9,48	1/1:1,9:10:15.05:189,15,0	1/1:3,15:18:27.07:327,27,0	0/1:5,0:5:12.69:13,0,137	1/1:6,23:28:62.97:689,63,0	0/0:1,0:1:3.01:0,3,50	1/1:1,5:6:12.04:151,12,0	1/1:0,6:6:9.03:113,9,0	0/0:8,0:8:24.06:0,24,362	./.	./.	1/1:0,4:4:6.02:76,6,0	1/1:2,5:7:12.04:151,12,0	1/1:3,12:15:18.03:226,18,0	1/1:3,1:5:8.79:70,9,0	1/1:1,14:15:42.09:489,42,0	1/1:2,2:4:9.03:113,9,0	0/1:3,8:11:19.51:136,0,20	0/0:2,0:2:5.99:0,6,50	0/0:8,0:8:24.08:0,24,398	0/0:7,0:7:18.04:0,18,268	1/1:0,7:7:18.06:227,18,0	1/1:3,6:9:17.96:210,18,0	0/1:2,8:10:28.39:101,0,28	1/1:1,2:3:3.01:38,3,0
chr10	80417676	.	A	AATT	718.63	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=3.096;DP=378;FS=1.186;HRun=0;HaplotypeScore=84.4706;InbreedingCoeff=0.9441;MQ=73.35;MQ0=0;MQRankSum=-1.633;QD=55.28;ReadPosRankSum=1.697;VQSLOD=5.5887;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:36.12:0,36,664	0/0:8,0:8:24.08:0,24,440	0/0:13,0:13:39.12:0,39,655	0/0:6,0:6:15.05:0,15,269	0/0:19,0:19:54.17:0,54,967	1/1:1,11:13:33.09:813,33,0	0/0:10,0:10:27.09:0,27,498	0/0:25,0:25:72.24:0,72,1302	0/0:15,0:15:45.12:0,45,763	0/0:17,0:17:51.16:0,51,889	0/0:20,0:20:60.17:0,60,998	0/0:11,0:11:30.10:0,30,530	./.	./.	0/0:16,0:16:45.15:0,45,831	0/0:17,0:17:51.16:0,51,913	0/0:13,0:12:36.12:0,36,648	0/0:15,0:15:42.14:0,42,757	0/0:17,0:17:51.16:0,51,896	0/0:18,0:18:54.17:0,54,967	0/0:4,0:3:12.04:0,12,203	0/0:7,0:7:21.06:0,21,361	0/0:22,0:22:63.20:0,63,1108	0/0:12,0:12:33.11:0,33,603	0/0:21,0:21:60.19:0,60,1081	0/0:22,0:22:66.23:0,66,1212	0/0:17,0:17:45.14:0,45,806	0/0:8,0:8:21.07:0,21,383
chr10	80419024	.	CT	C	4926.45	PASS	AB=0.760;AC=34;AF=0.607;AN=56;BaseQRankSum=2.257;DP=438;FS=11.207;HRun=11;HaplotypeScore=49.6655;InbreedingCoeff=0.8401;MQ=61.50;MQ0=20;MQRankSum=-1.885;QD=16.81;ReadPosRankSum=-0.207;VQSLOD=4.7523;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:31:75.02:0,75,780	1/1:4,2:4:5.97:49,6,0	0/0:15,0:10:9.80:0,10,108	0/0:7,0:7:10.23:0,10,78	1/1:2,22:24:58.95:473,59,0	0/0:0,0:12:25.57:0,26,128	0/0:10,0:9:18.05:0,18,192	1/1:7,17:24:49.95:400,50,0	0/1:7,1:7:9.61:10,0,105	1/1:1,19:20:50.93:418,51,0	1/1:2,12:14:32.94:270,33,0	1/1:1,12:13:29.96:246,30,0	0/0:8,0:8:24.06:0,24,255	0/0:8,1:8:18.05:0,18,192	1/1:6,9:13:26.95:222,27,0	0/1:5,7:12:5.04:170,0,5	1/1:6,13:14:35.96:296,36,0	1/1:2,11:12:32.96:271,33,0	1/1:8,7:14:22.78:176,23,0	1/1:3,15:18:24.80:346,25,0	1/1:3,8:11:14.96:123,15,0	0/0:15,0:15:35.96:0,36,366	0/0:16,0:15:38.73:0,39,369	0/0:15,0:14:24.06:0,24,256	1/1:4,16:20:50.92:419,51,0	1/1:2,16:18:33.92:356,34,0	1/1:4,16:19:47.88:388,48,0	1/1:4,16:18:35.94:296,36,0
chr10	80420279	.	CT	C	2047.49	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.084;DP=599;FS=1.043;HRun=4;HaplotypeScore=55.4282;InbreedingCoeff=0.9870;MQ=71.93;MQ0=0;MQRankSum=-3.455;QD=30.56;ReadPosRankSum=2.756;VQSLOD=3.9110;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:36.11:432,36,0	0/0:5,0:5:15.05:0,15,206	0/0:16,0:16:36.11:0,36,474	0/0:10,0:10:28.90:0,29,373	0/0:36,0:36:99:0,108,1509	0/0:26,0:26:75.21:0,75,998	0/0:14,0:14:42.14:0,42,587	0/0:35,0:35:99:0,99,1343	0/0:20,0:20:57.16:0,57,763	0/0:31,0:31:84.25:0,84,1120	0/0:24,0:24:66.10:0,66,814	0/0:19,0:19:54.17:0,54,739	1/1:0,27:27:75.23:900,75,0	1/1:1,25:26:72.22:859,72,0	0/0:31,0:31:87.29:0,87,1218	0/0:24,0:24:69.23:0,69,966	0/0:16,0:16:48.11:0,48,633	0/0:14,0:14:42.12:0,42,570	0/0:24,0:24:54.18:0,54,755	0/0:31,0:31:90.30:0,90,1258	0/0:17,0:17:51.15:0,51,681	0/0:14,0:14:42.14:0,42,588	0/0:20,0:20:60.19:0,60,823	0/0:7,0:7:21.03:0,21,272	0/0:26,0:26:75.25:0,75,1046	0/0:31,0:31:90.28:0,90,1216	0/0:36,0:36:99:0,108,1477	0/0:5,0:5:15.05:0,15,210
chr10	80420358	.	AG	A	668.24	PASS	AB=0.607;AC=1;AF=0.018;AN=56;BaseQRankSum=5.068;DP=651;FS=7.445;HRun=1;HaplotypeScore=61.6013;InbreedingCoeff=-0.0182;MQ=79.36;MQ0=0;MQRankSum=-0.364;QD=19.65;ReadPosRankSum=1.566;VQSLOD=3.4605;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.19:0,57,910	0/0:16,0:16:48.13:0,48,720	0/0:21,0:21:62.55:0,63,903	0/0:10,0:10:30.01:0,30,416	0/0:32,0:32:90.31:0,90,1425	0/0:28,0:28:84.29:0,84,1341	0/0:21,0:21:63.21:0,63,993	0/0:33,0:33:99:0,99,1540	0/0:18,0:18:54.17:0,54,839	0/0:24,0:24:72.24:0,72,1127	0/0:34,0:34:99:0,102,1580	0/0:16,0:16:48.16:0,48,767	0/0:28,0:28:75.22:0,75,1147	0/0:29,0:29:84.29:0,84,1331	0/0:23,0:23:69.19:0,69,1032	0/0:29,0:29:87.30:0,87,1388	0/0:16,0:16:48.16:0,48,767	0/0:13,0:13:36.08:0,36,532	0/0:20,0:20:57.17:0,57,866	0/1:12,22:34:99:743,0,479	0/0:28,0:28:84.25:0,84,1291	0/0:17,0:17:51.17:0,51,813	0/0:21,0:21:63.20:0,63,979	0/0:13,0:13:39.13:0,39,623	0/0:25,0:25:75.24:0,75,1171	0/0:33,0:33:99:0,99,1527	0/0:39,0:39:99:0,114,1817	0/0:9,0:9:27.09:0,27,431
chr10	80420624	.	TAAAA	T	14624.60	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=9.806;DP=593;FS=8.889;HRun=13;HaplotypeScore=130.0688;InbreedingCoeff=0.9646;MQ=72.82;MQ0=1;MQRankSum=-3.385;QD=32.43;ReadPosRankSum=5.644;VQSLOD=2.7762;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:51.12:738,51,0	1/1:1,10:11:24.04:351,24,0	0/0:21,0:21:30.10:0,30,567	0/0:10,0:8:12.01:0,12,166	1/1:4,23:27:57.08:826,57,0	1/1:4,30:34:81.21:1185,81,0	0/0:16,0:19:48.16:0,48,955	1/1:11,20:32:62.96:876,63,0	0/0:21,0:23:66.11:0,66,1430	1/1:1,25:26:75.20:1050,75,0	1/1:2,15:18:48.12:643,48,0	0/0:12,0:12:27.06:0,27,598	1/1:4,24:28:60.18:871,60,0	1/1:1,15:16:42.14:600,42,0	1/1:2,25:28:63.17:894,63,0	1/1:5,18:23:48.12:702,48,0	1/1:8,31:39:82.45:1188,82,0	1/1:1,2:3:2.99:44,3,0	1/1:4,12:16:36.01:470,36,0	1/1:1,24:25:66.16:958,66,0	1/1:1,15:16:36.09:511,36,0	0/0:16,0:18:54.17:0,54,1136	0/0:20,0:21:54.18:0,54,1217	0/0:17,0:17:48.16:0,48,1071	1/1:4,14:19:42.09:594,42,0	1/1:5,19:24:60.16:857,60,0	1/1:4,27:31:66.18:965,66,0	1/1:0,11:11:21.07:301,21,0
chr10	80421107	.	ACTTTT	A	12059.41	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=13.686;DP=418;FS=0.791;HRun=0;HaplotypeScore=82.6820;InbreedingCoeff=0.9712;MQ=82.10;MQ0=0;MQRankSum=-4.186;QD=50.04;ReadPosRankSum=1.213;VQSLOD=5.0796;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.23:0,75,2168	1/1:0,7:7:21.07:441,21,0	0/0:14,0:14:30.10:0,30,902	0/0:10,0:10:27.08:0,27,634	1/1:1,17:18:47.85:771,48,0	0/0:17,0:17:51.11:0,51,1505	0/0:17,0:17:45.14:0,45,1302	1/1:2,28:29:81.23:1586,81,0	0/0:11,0:11:33.11:0,33,1023	1/1:1,20:21:60.20:1216,60,0	1/1:0,16:16:41.95:788,42,0	0/0:18,0:18:54.19:0,54,1656	0/0:16,0:16:45.14:0,45,1326	0/0:12,0:12:36.12:0,36,1116	1/1:0,14:14:39.07:774,39,0	1/1:1,13:14:36.06:710,36,0	1/1:1,18:19:36.12:752,36,0	1/1:1,7:8:15.05:315,15,0	1/1:1,8:9:24.08:494,24,0	1/1:0,18:18:53.91:926,54,0	1/1:2,12:14:33.03:647,33,0	0/0:11,0:11:33.10:0,33,957	0/0:19,0:19:54.19:0,54,1591	0/0:6,0:6:18.05:0,18,491	1/1:1,14:15:33.11:693,33,0	1/1:0,15:15:45.13:859,45,0	1/1:1,20:21:51.12:1026,51,0	1/1:0,2:2:3.01:63,3,0
chr10	80422415	.	AGCTT	A	3945.23	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=6.531;DP=287;FS=13.084;HRun=0;HaplotypeScore=56.9838;InbreedingCoeff=0.6602;MQ=76.90;MQ0=0;MQRankSum=-3.739;QD=17.53;ReadPosRankSum=-0.429;VQSLOD=1.5592;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,4:6:3.01:51,3,0	1/1:0,3:3:3.01:51,3,0	0/0:10,0:10:12.02:0,12,119	0/1:8,0:8:32.10:32,0,150	1/1:3,4:7:18.03:246,18,0	1/1:1,8:9:6.02:101,6,0	0/0:4,0:4:6.01:0,6,96	1/1:10,15:23:39.12:630,39,0	0/0:8,0:8:24.07:0,24,523	1/1:5,12:17:23.67:271,24,0	1/1:5,2:7:7.22:103,7,0	0/0:13,0:13:30.10:0,30,735	1/1:6,7:13:3.01:49,3,0	1/1:1,4:5:3.01:51,3,0	1/1:6,1:7:11.61:133,12,0	1/1:5,1:6:11.61:99,12,0	1/1:2,12:14:7.58:106,8,0	1/1:3,3:6:3.48:52,3,0	1/1:6,13:19:39.02:507,39,0	1/1:6,8:14:13.19:351,13,0	1/1:1,1:2:3.01:51,3,0	0/0:7,0:7:15.04:0,15,318	0/0:11,0:11:27.08:0,27,611	0/0:9,0:9:21.06:0,21,466	1/1:8,9:17:17.33:236,17,0	1/1:7,11:18:35.03:442,35,0	1/1:3,13:16:16.47:257,16,0	1/1:5,1:6:11.89:128,12,0
chr10	80422438	.	T	TATTTATTTATTTA	4784.88	PASS	AB=0.913;AC=18;AF=0.321;AN=56;BaseQRankSum=0.486;DP=238;FS=21.458;HRun=0;HaplotypeScore=93.4765;InbreedingCoeff=-0.4227;MQ=57.82;MQ0=2;MQRankSum=-4.950;QD=26.29;ReadPosRankSum=1.138;VQSLOD=1.6223;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:6:7.35:224,0,7	0/0:2,0:2:2.92:0,3,17	0/0:7,0:4:11.67:0,12,116	0/0:4,0:4:7.16:0,7,60	0/1:4,0:5:40.18:151,0,40	0/1:10,0:9:23.73:160,0,24	0/0:2,0:2:6.01:0,6,152	0/1:33,0:29:99:863,0,142	0/0:7,0:7:21.05:0,21,429	0/1:11,0:11:42.58:74,0,43	0/1:2,2:4:16.16:323,0,16	0/0:10,0:10:30.10:0,30,656	0/1:4,1:5:4.80:162,0,5	0/1:5,0:5:7.49:43,0,7	0/1:2,0:3:23.87:156,0,24	0/1:4,2:6:6.17:533,0,6	0/1:13,0:14:23.73:166,0,24	0/1:6,0:6:27.42:151,0,27	0/1:19,0:18:99:371,0,153	0/1:10,0:10:75.86:95,0,76	0/0:1,0:1:2.90:0,3,16	0/0:5,0:5:15.05:0,15,362	0/0:8,0:8:24.06:0,24,472	0/0:9,0:10:30.10:0,30,685	0/1:11,2:13:34.93:700,0,35	0/1:10,1:11:60.73:272,0,61	0/1:13,2:15:99:315,0,100	0/1:6,0:6:13.39:24,0,13
chr10	80422754	.	T	TA	10004.22	PASS	AB=0.783;AC=38;AF=0.679;AN=56;BaseQRankSum=-10.010;DP=545;FS=9.808;HRun=9;HaplotypeScore=50.3005;InbreedingCoeff=0.8515;MQ=67.06;MQ0=0;MQRankSum=-0.978;QD=25.39;ReadPosRankSum=0.792;VQSLOD=5.1262;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:30:63.17:690,63,0	1/1:0,5:5:15.04:166,15,0	0/0:26,0:18:2.01:0,2,205	0/0:10,0:8:13.06:0,13,100	1/1:1,15:17:47.92:497,48,0	1/1:2,1:15:34.12:171,34,0	0/0:24,0:24:59.97:0,60,521	1/1:4,28:32:81.16:865,81,0	0/0:23,0:23:62.98:0,63,547	1/1:2,18:20:51.12:555,51,0	1/1:0,17:17:51.10:549,51,0	0/0:15,0:15:44.94:0,45,381	1/1:3,18:21:51.14:564,51,0	1/1:6,19:25:51.14:564,51,0	1/1:3,32:35:75.20:830,75,0	1/1:0,18:18:48.12:523,48,0	1/1:4,17:21:54.08:581,54,0	0/1:4,13:17:16.01:296,0,16	1/1:2,14:16:36.10:397,36,0	1/1:2,7:9:18.05:199,18,0	1/1:3,11:14:30.08:332,30,0	0/0:12,0:12:32.97:0,33,283	0/0:14,0:14:38.98:0,39,339	0/0:27,0:27:65.96:0,66,569	1/1:8,18:25:66:697,66,0	1/1:4,25:29:75.16:810,75,0	1/1:3,23:26:66.15:718,66,0	0/1:1,0:1:0:0,0,0
chr10	80423122	.	C	CA	1048.38	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.630;DP=624;FS=0.656;HRun=6;HaplotypeScore=56.7353;InbreedingCoeff=0.9961;MQ=58.05;MQ0=6;MQRankSum=4.546;QD=25.57;ReadPosRankSum=1.604;VQSLOD=3.6913;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:90.17:0,90,909	0/0:8,0:8:24.05:0,24,245	0/0:19,0:13:28.83:0,29,357	0/0:14,0:10:28.87:0,29,276	0/0:25,0:25:63.13:0,63,636	0/0:23,0:23:63.14:0,63,643	0/0:15,0:15:39.07:0,39,391	0/0:35,0:35:93.18:0,93,932	0/0:18,0:18:51.08:0,51,506	0/0:20,0:20:54.12:0,54,551	0/0:28,0:28:72.16:0,72,734	0/0:21,0:21:60.14:0,60,612	1/1:3,14:17:42.13:528,42,0	1/1:6,18:24:51.16:642,51,0	0/0:20,0:20:60.14:0,60,612	0/0:28,0:28:84.18:0,84,850	0/0:34,1:35:49.45:0,49,811	0/0:27,0:27:59.96:0,60,681	0/0:20,0:19:51.10:0,51,514	0/0:21,0:21:60.13:0,60,612	0/0:17,0:16:42.06:0,42,418	0/0:19,0:19:48.11:0,48,490	0/0:23,0:23:63.14:0,63,643	0/0:15,0:15:45.10:0,45,459	0/0:27,0:27:72.16:0,72,735	0/0:31,0:31:84.18:0,84,857	0/0:31,0:31:93.21:0,93,949	0/0:8,0:8:21.05:0,21,214
chr10	80425082	.	AGAGAGAGAGAGAGAGG	A	4198.62	PASS	AB=0.969;AC=35;AF=0.648;AN=54;BaseQRankSum=10.416;DP=520;FS=5.595;HRun=0;HaplotypeScore=195.5907;InbreedingCoeff=0.7431;MQ=58.63;MQ0=24;MQRankSum=3.284;QD=12.03;ReadPosRankSum=-0.752;VQSLOD=2.3219;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:99:154,0,393	1/1:15,0:13:4.53:170,5,0	0/0:18,0:5:4.94:0,5,60	0/0:25,0:5:1.14:0,1,46	1/1:6,21:27:29.11:287,29,0	1/1:23,0:23:31.64:297,32,0	0/0:13,0:13:29.99:0,30,324	1/1:25,0:22:20.11:299,20,0	0/0:12,0:12:29.93:0,30,486	1/1:17,0:17:26.13:210,26,0	1/1:21,0:21:34.70:261,35,0	0/0:18,0:16:32.99:0,33,591	1/1:19,0:18:38.58:321,39,0	1/1:16,0:16:6:71,6,0	1/1:19,0:18:29.82:340,30,0	1/1:14,0:13:13.57:167,14,0	1/1:21,0:21:25.38:372,25,0	0/0:6,0:5:4.40:0,4,18	1/1:4,8:10:4.17:141,4,0	1/1:18,0:18:32.39:206,32,0	./.	0/0:27,0:25:59.63:0,60,1026	0/0:16,0:15:31.25:0,31,436	0/0:15,0:15:30.84:0,31,291	1/1:14,0:14:25.80:186,26,0	1/1:29,0:27:46.82:401,47,0	1/1:9,17:25:5.13:271,5,0	1/1:2,0:2:5.97:44,6,0
chr10	80425096	.	AGG	A	4593.08	PASS	AB=1.000;AC=37;AF=0.685;AN=54;BaseQRankSum=8.958;DP=501;FS=0.000;HRun=3;HaplotypeScore=90.6481;InbreedingCoeff=0.8123;MQ=76.94;MQ0=20;MQRankSum=1.054;QD=15.01;ReadPosRankSum=1.232;VQSLOD=1.7586;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:33.16:359,33,0	1/1:13,0:11:32.76:238,33,0	0/0:33,0:19:33.13:0,33,361	0/0:38,0:15:20.86:0,21,226	1/1:23,0:23:29.07:172,29,0	1/1:17,0:17:48.44:338,48,0	0/0:19,0:19:47.83:0,48,421	1/1:5,32:35:72.21:640,72,0	0/0:15,0:15:41.84:0,42,347	1/1:2,14:16:40.21:304,40,0	1/1:16,0:16:35.40:263,35,0	0/0:18,0:16:7.90:0,8,272	1/1:17,0:17:50.02:390,50,0	1/1:0,10:10:2.99:23,3,0	1/1:9,0:9:26.77:192,27,0	1/1:14,0:13:27.74:234,28,0	1/1:14,0:14:19.78:227,20,0	0/1:3,0:6:8:14,0,8	1/1:11,0:9:4.41:142,4,0	1/1:2,19:21:47.14:297,47,0	./.	0/0:28,0:26:15.95:0,16,410	0/0:13,0:12:4.26:0,4,182	0/0:14,0:14:29.95:0,30,251	1/1:12,0:12:29.83:221,30,0	1/1:1,22:22:56.30:432,56,0	1/1:19,0:18:5.90:42,6,0	1/1:3,0:3:8.94:65,9,0
chr10	80425098	.	G	GGA	8027.15	PASS	AC=38;AF=0.704;AN=54;BaseQRankSum=3.477;DP=505;FS=0.000;HRun=0;HaplotypeScore=79.6453;InbreedingCoeff=0.8700;MQ=77.77;MQ0=19;MQRankSum=-0.646;QD=25.98;ReadPosRankSum=0.484;VQSLOD=5.4361;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:0.83:24,1,0	1/1:13,0:11:33.11:521,33,0	0/0:33,0:19:42.74:0,43,504	0/0:39,0:16:29.34:0,29,372	1/1:25,0:25:29.76:345,30,0	1/1:17,0:17:51.13:755,51,0	0/0:19,0:19:47.95:0,48,618	1/1:37,0:35:99:1328,99,0	0/0:15,0:15:39.13:0,39,500	1/1:15,0:15:42.09:600,42,0	1/1:17,0:17:36.11:515,36,0	0/0:17,0:16:36.07:0,36,427	1/1:17,0:17:7.85:59,8,0	1/1:10,0:10:3.01:41,3,0	1/1:11,0:11:30.09:442,30,0	1/1:14,0:13:33.11:534,33,0	1/1:13,1:14:33.30:425,33,0	1/1:6,1:6:0.47:1,0,0	1/1:11,0:9:21.06:305,21,0	1/1:21,0:21:48.06:576,48,0	./.	0/0:28,0:26:60.12:0,60,731	0/0:12,0:11:27.08:0,27,335	0/0:15,0:15:33.05:0,33,392	1/1:12,0:12:30.03:485,30,0	1/1:23,0:22:57.19:879,57,0	1/1:18,0:17:5.47:24,5,0	1/1:4,0:4:12.03:167,12,0
chr10	80426189	.	T	TATAC	375.56	PASS	AB=0.963;AC=18;AF=0.391;AN=46;BaseQRankSum=-0.483;DP=738;FS=0.936;HRun=0;HaplotypeScore=208.9781;InbreedingCoeff=0.3181;MQ=65.47;MQ0=6;MQRankSum=0.355;QD=0.91;ReadPosRankSum=0.965;VQSLOD=2.6594;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:0.47:0,0,1	0/1:8,0:8:0:0,0,0	./.	./.	1/1:34,0:34:2.82:23,3,0	0/1:36,0:36:0:0,0,0	0/0:12,0:12:12:0,12,120	1/1:47,0:46:3.61:41,4,0	0/0:27,0:27:39.12:0,39,575	0/1:45,0:44:36.80:37,0,332	0/1:24,0:24:0:0,0,0	0/0:37,0:37:53.99:0,54,588	1/1:29,0:29:2.99:24,3,0	0/1:27,0:27:0:0,0,0	0/1:34,0:34:0:0,0,0	0/1:36,0:36:0:0,0,0	0/0:11,0:11:0.47:0,0,1	1/1:7,0:7:2.99:24,3,0	0/1:21,0:18:10.88:11,0,54	./.	./.	0/1:10,15:25:50.08:330,0,50	0/0:31,0:31:51.12:0,51,697	0/0:26,0:26:36.02:0,36,439	0/1:38,0:38:0:0,0,0	0/0:26,0:26:28.96:0,29,256	0/0:30,0:30:5.07:0,5,79	./.
chr10	80426224	.	ACATACATACATG	A	1637.95	PASS	AB=0.929;AC=15;AF=0.313;AN=48;BaseQRankSum=11.056;DP=743;FS=3.365;HRun=0;HaplotypeScore=272.3261;InbreedingCoeff=0.1568;MQ=55.92;MQ0=15;MQRankSum=-0.215;QD=4.82;ReadPosRankSum=0.558;VQSLOD=2.5382;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:5.02:0,5,48	0/0:11,0:11:0.21:0,0,0	1/1:13,0:3:2.04:6,2,0	./.	1/1:39,0:39:2.07:91,2,0	0/0:1,31:32:0:0,0,0	0/0:15,0:15:39.07:0,39,800	0/1:51,0:48:99:441,0,213	0/0:33,0:33:90.21:0,90,2966	0/1:47,0:45:17.58:401,0,18	0/0:27,0:27:2.46:0,2,25	0/0:27,0:27:78.20:0,78,2718	1/1:3,23:26:3.01:46,3,0	0/1:0,33:33:0:0,0,0	0/0:38,0:38:2.73:0,3,25	1/1:31,0:31:1.23:3,1,0	./.	0/1:13,0:12:83.71:84,0,85	0/1:23,0:19:24.49:229,0,24	0/0:26,0:26:3:0,3,26	./.	0/0:25,0:25:45.10:0,45,1618	0/0:24,0:24:69.17:0,69,2937	0/0:24,0:24:66.14:0,66,2332	0/0:39,1:40:5.99:0,6,50	0/1:33,0:33:3.52:420,0,4	0/1:31,0:31:3.94:42,0,4	./.
chr10	80426228	.	ACATACATG	A	6538.04	PASS	AB=0.654;AC=27;AF=0.500;AN=54;BaseQRankSum=11.315;DP=736;FS=4.684;HRun=0;HaplotypeScore=218.4301;InbreedingCoeff=0.5442;MQ=56.30;MQ0=13;MQRankSum=-0.203;QD=13.45;ReadPosRankSum=-2.776;VQSLOD=3.5144;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,23:28:0.89:2,1,0	0/0:0,12:12:0.35:0,0,1	1/1:10,0:1:2.04:6,2,0	0/0:12,0:1:0:0,0,0	1/1:1,40:41:2.11:45,2,0	0/0:31,0:31:0:0,0,0	0/0:15,0:15:39.05:0,39,605	1/1:50,0:47:99:943,125,0	0/0:29,0:29:84.16:0,84,2103	1/1:3,46:47:99:2512,135,0	0/1:1,26:27:0.27:0,0,1	0/0:28,0:28:81.18:0,81,2181	1/1:24,0:24:2.96:19,3,0	0/1:33,0:33:0.09:0,0,0	0/1:2,36:38:0:0,0,0	1/1:0,28:28:2.97:71,3,0	0/1:1,7:8:0:0,0,0	0/1:13,0:12:36.67:196,0,37	1/1:3,17:18:50.91:682,51,0	0/1:1,25:26:0.09:0,0,0	0/1:1,25:26:0:0,0,0	0/0:25,0:25:45.09:0,45,1105	0/0:24,0:24:66.17:0,66,2195	0/0:26,0:26:72.13:0,72,1790	0/0:3,37:40:0.37:0,0,1	1/1:1,31:32:93.05:1650,93,0	1/1:0,32:32:15.05:411,15,0	./.
chr10	80426232	.	ACATG	A	3808.52	PASS	AB=1.000;AC=27;AF=0.540;AN=50;BaseQRankSum=12.721;DP=734;FS=4.034;HRun=0;HaplotypeScore=201.5407;InbreedingCoeff=0.5675;MQ=56.19;MQ0=11;MQRankSum=0.641;QD=7.97;ReadPosRankSum=-1.175;VQSLOD=2.4419;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:0.88:2,1,0	0/0:12,0:12:0.35:0,0,1	1/1:12,0:1:2.04:6,2,0	0/0:14,0:1:0:0,0,0	1/1:41,0:41:2.65:22,3,0	./.	0/0:19,0:19:44.83:0,45,433	1/1:13,34:44:99:775,101,0	0/0:32,0:32:93.07:0,93,1369	1/1:48,0:46:99:1314,129,0	0/1:26,0:26:0.04:0,0,0	0/0:30,0:30:80.99:0,81,1143	1/1:24,0:24:2.98:21,3,0	0/1:33,0:33:0.11:0,0,0	./.	1/1:28,0:28:2.93:25,3,0	0/1:8,0:8:0:0,0,0	0/1:14,0:12:14.20:128,0,14	1/1:19,0:18:43.51:406,44,0	0/1:25,0:25:0:0,0,0	0/1:26,0:26:0:0,0,0	0/0:25,0:25:48.04:0,48,688	0/0:24,0:24:49.11:0,49,1250	0/0:25,0:25:63.07:0,63,965	0/1:38,0:38:0.11:0,0,0	1/1:32,0:32:90.03:931,90,0	1/1:32,0:32:15.04:179,15,0	./.
chr10	80427067	.	C	CT	2327.26	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-8.637;DP=562;FS=1.457;HRun=9;HaplotypeScore=53.1080;InbreedingCoeff=0.9926;MQ=76.55;MQ0=0;MQRankSum=-1.670;QD=23.51;ReadPosRankSum=2.901;VQSLOD=4.4763;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,14:20:47.33:487,47,0	0/0:9,0:9:23.99:0,24,208	0/0:24,0:24:20.98:0,21,323	0/0:18,0:16:29.97:0,30,258	0/0:12,0:12:32.98:0,33,287	1/1:6,23:29:36.84:666,37,0	0/0:16,0:16:32.98:0,33,286	0/0:37,0:37:74.94:0,75,646	0/0:14,0:14:26.94:0,27,231	0/0:29,2:31:39.82:0,40,611	0/0:19,1:20:20.81:0,21,409	0/0:26,0:26:74.95:0,75,646	1/1:2,27:29:72.19:796,72,0	1/1:1,20:21:28.73:539,29,0	0/0:34,0:34:95.98:0,96,833	0/0:21,0:21:56.96:0,57,491	0/0:22,0:22:56.99:0,57,495	0/0:6,0:6:18:0,18,156	0/0:16,0:16:38.97:0,39,336	0/0:15,0:15:41.99:0,42,365	0/0:21,0:21:56.98:0,57,495	0/0:9,0:9:20.99:0,21,182	0/0:15,0:15:41.99:0,42,364	0/0:14,0:14:38.99:0,39,339	0/0:13,0:13:32.98:0,33,286	0/0:24,0:24:68.99:0,69,599	0/0:35,0:35:95.94:0,96,828	0/0:11,0:11:32.99:0,33,286
chr10	80430006	.	TTATATATATA	T	3546.97	PASS	AC=34;AF=0.773;AN=44;BaseQRankSum=0.205;DP=209;FS=6.009;HRun=0;HaplotypeScore=71.0988;InbreedingCoeff=0.3561;MQ=77.59;MQ0=1;MQRankSum=-0.839;QD=23.65;ReadPosRankSum=-0.392;VQSLOD=1.8645;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:2.99:0,3,24	1/1:1,1:2:3.01:90,3,0	0/0:8,0:4:0.47:0,0,1	0/0:18,0:10:0.47:0,0,1	1/1:4,2:6:3.01:90,3,0	0/0:1,0:4:6.02:0,6,242	./.	1/1:23,7:30:21.03:409,21,0	./.	1/1:10,3:13:9.03:271,9,0	1/1:3,5:8:6.02:181,6,0	./.	1/1:10,0:9:3.01:59,3,0	1/1:1,0:5:12.04:279,12,0	1/1:3,2:5:3.01:90,3,0	1/1:4,3:6:9.03:271,9,0	1/1:6,6:12:12.04:361,12,0	1/1:5,1:6:3.01:90,3,0	0/0:11,0:10:1.25:0,1,3	1/1:5,1:6:3.01:90,3,0	1/1:4,0:4:3.01:90,3,0	./.	./.	./.	1/1:7,6:13:15.05:452,15,0	1/1:7,7:14:21.06:541,21,0	1/1:7,1:8:3.01:90,3,0	1/1:0,1:1:3.01:90,3,0
chr10	80432233	.	CTCTCTCTCTCCG	C	3393.66	PASS	AB=0.995;AC=33;AF=0.589;AN=56;BaseQRankSum=3.409;DP=491;FS=32.998;HRun=0;HaplotypeScore=156.3441;InbreedingCoeff=-0.2484;MQ=35.05;MQ0=85;MQRankSum=-0.503;QD=9.98;ReadPosRankSum=-1.672;VQSLOD=1.0183;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:11:0.93:68,0,1	0/1:8,0:8:9.68:43,0,10	0/0:64,0:2:5.93:0,6,48	0/0:62,0:3:4.56:0,5,44	0/1:25,2:26:5.35:152,0,5	0/1:19,0:16:19.23:19,0,468	1/1:14,0:13:10:197,10,0	0/1:8,0:8:99:161,0,144	0/1:13,0:13:99:184,0,198	1/1:12,4:15:15.82:799,16,0	0/0:12,1:12:0.47:0,0,1	0/1:17,0:17:99:222,0,158	0/1:16,0:14:78.40:78,0,144	0/1:8,0:8:23.61:24,0,66	0/0:11,1:10:0.16:0,0,16	1/1:13,1:14:5.08:48,5,0	1/1:11,0:9:3.68:127,4,0	1/1:7,0:4:3.86:23,4,0	0/1:14,0:11:63.75:64,0,263	0/1:12,0:11:21.21:21,0,51	1/1:6,0:4:0.89:2,1,0	0/1:21,0:21:0.91:247,0,1	1/1:21,0:18:14.87:178,15,0	0/1:22,0:22:99:159,0,372	1/1:17,1:18:12.51:178,13,0	0/1:14,0:13:99:246,0,186	0/1:19,0:18:99:135,0,101	1/1:3,0:3:2.94:18,3,0
chr10	80432237	.	CTCTCTCCG	C	4159.59	PASS	AB=0.994;AC=40;AF=0.714;AN=56;BaseQRankSum=2.079;DP=476;FS=7.068;HRun=0;HaplotypeScore=135.9616;InbreedingCoeff=-0.0391;MQ=34.77;MQ0=86;MQRankSum=0.265;QD=12.02;ReadPosRankSum=-0.034;VQSLOD=1.8900;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:10:0.93:39,0,1	1/1:8,0:8:7.92:54,8,0	0/0:68,0:2:5.93:0,6,48	0/0:62,0:3:4.56:0,5,44	1/1:21,1:21:12.89:120,13,0	0/1:19,0:16:20.65:21,0,160	1/1:14,0:13:17.05:251,17,0	0/1:7,0:7:58.42:182,0,58	0/1:12,0:12:48.52:188,0,49	1/1:14,1:14:41.99:691,42,0	0/1:12,0:11:0:0,0,0	0/1:18,0:18:2.15:253,0,2	1/1:15,0:13:21.73:148,22,0	0/1:8,0:8:3.88:59,0,4	1/1:12,0:10:4.41:15,4,0	1/1:12,0:12:5.59:43,6,0	1/1:12,0:10:14.49:85,14,0	1/1:6,0:3:0.89:2,1,0	0/1:12,1:10:48.72:221,0,49	0/1:12,0:11:11.49:26,0,11	1/1:6,0:5:2.37:8,2,0	1/1:20,0:20:21.03:271,21,0	1/1:17,0:16:14.93:180,15,0	0/1:23,0:23:58.28:284,0,58	1/1:16,1:16:12.51:341,13,0	0/1:14,0:13:30.48:348,0,30	0/1:17,0:16:3.96:313,0,4	1/1:3,0:3:2.94:18,3,0
chr10	80432239	.	CTCTCCG	C	4602.85	PASS	AB=0.985;AC=47;AF=0.839;AN=56;BaseQRankSum=1.457;DP=469;FS=0.000;HRun=0;HaplotypeScore=128.2496;InbreedingCoeff=0.1874;MQ=34.65;MQ0=86;MQRankSum=1.379;QD=13.66;ReadPosRankSum=-0.255;VQSLOD=4.1424;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:10:0.96:17,0,1	1/1:7,1:8:8.55:55,9,0	0/0:69,0:2:5.93:0,6,48	0/0:63,0:3:4.56:0,5,44	1/1:22,0:21:12.89:104,13,0	0/1:19,0:16:22.27:32,0,22	1/1:15,0:14:23.56:370,24,0	0/1:8,0:8:16.60:182,0,17	1/1:13,0:13:3.04:237,3,0	1/1:15,0:14:41.99:588,42,0	0/1:11,1:11:0:0,0,0	1/1:16,1:17:25.26:347,25,0	1/1:12,0:11:24.71:218,25,0	1/1:8,0:8:11.29:101,11,0	1/1:12,0:10:5.37:32,5,0	1/1:12,0:12:4.10:21,4,0	1/1:9,0:7:10.96:69,11,0	1/1:6,0:3:3.90:46,4,0	1/1:13,0:10:0.45:273,0,0	1/1:12,0:11:4.25:47,4,0	1/1:6,0:5:3:25,3,0	1/1:20,0:20:21.03:271,21,0	1/1:18,0:17:17.95:205,18,0	1/1:21,0:21:8.83:385,9,0	1/1:15,1:15:12.51:248,13,0	0/1:11,0:10:5.70:339,0,6	1/1:16,1:16:18.09:374,18,0	1/1:3,0:3:2.94:18,3,0
chr10	80432243	.	CCG	C	4923.85	PASS	AB=0.746;AC=49;AF=0.875;AN=56;BaseQRankSum=0.700;DP=455;FS=0.000;HRun=0;HaplotypeScore=116.8677;InbreedingCoeff=0.4034;MQ=35.17;MQ0=83;MQRankSum=1.687;QD=15.24;ReadPosRankSum=2.052;VQSLOD=4.6511;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,5:10:0.95:18,0,1	1/1:6,2:8:9.33:57,9,0	0/0:69,0:2:5.93:0,6,48	0/0:63,0:3:4.56:0,5,44	1/1:13,8:20:8.82:68,9,0	1/1:18,0:15:22.31:279,22,0	1/1:9,5:13:27.09:381,27,0	1/1:0,7:7:18.49:224,18,0	1/1:8,3:11:24.31:350,24,0	1/1:10,4:13:38.93:378,39,0	0/1:9,3:11:0:0,0,0	1/1:12,6:18:32.79:443,33,0	1/1:12,1:12:30.96:260,31,0	1/1:7,0:7:11.80:119,12,0	1/1:10,3:11:8.87:71,9,0	1/1:10,2:12:5.91:38,6,0	1/1:5,3:7:12.25:74,12,0	1/1:4,1:3:5.38:52,5,0	1/1:8,2:10:25.26:218,25,0	1/1:8,2:9:5.92:50,6,0	1/1:3,1:5:2.97:25,3,0	1/1:9,9:18:20.99:272,21,0	1/1:9,8:15:18:209,18,0	1/1:19,2:21:42.14:634,42,0	1/1:14,2:15:12.02:134,12,0	0/1:7,4:10:5.68:281,0,6	1/1:14,2:16:33.03:271,33,0	1/1:2,0:3:2.94:18,3,0
chr10	80433781	.	G	GT	1255.62	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.020;DP=621;FS=3.040;HRun=7;HaplotypeScore=63.1666;InbreedingCoeff=0.9908;MQ=83.74;MQ0=0;MQRankSum=-4.991;QD=27.90;ReadPosRankSum=0.271;VQSLOD=4.3745;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.04:0,57,536	0/0:5,0:5:15.02:0,15,145	0/0:22,0:22:42.05:0,42,402	0/0:14,0:14:32.96:0,33,299	0/0:31,0:31:90.14:0,90,869	1/1:4,19:23:51.16:616,51,0	1/1:0,22:22:63.19:761,63,0	0/0:42,0:42:99:0,99,924	0/0:28,0:28:78.12:0,78,753	0/0:21,0:21:48.07:0,48,463	0/0:27,0:27:75.12:0,75,724	0/0:25,0:25:66.08:0,66,626	0/0:25,0:25:66.10:0,66,637	0/0:22,0:22:54.08:0,54,521	0/0:21,0:21:57.09:0,57,550	0/0:15,0:15:42.04:0,42,398	0/0:19,0:19:51.08:0,51,492	0/0:12,0:12:29.42:0,29,288	0/0:21,0:21:54.05:0,54,509	0/0:22,0:22:60.08:0,60,574	0/0:11,0:11:27.04:0,27,260	0/0:31,0:31:90.14:0,90,869	0/0:19,0:19:51.08:0,51,493	0/0:17,0:17:48.08:0,48,463	0/0:27,0:27:75.12:0,75,724	0/0:26,0:26:63.09:0,63,608	0/0:35,0:35:81.11:0,81,782	0/0:17,0:17:42.05:0,42,406
chr10	80436821	.	ATAAG	A	1932.05	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.472;DP=574;FS=0.000;HRun=0;HaplotypeScore=121.0917;InbreedingCoeff=0.9849;MQ=68.88;MQ0=1;MQRankSum=-3.559;QD=40.25;ReadPosRankSum=3.070;VQSLOD=3.9584;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.14:0,57,1350	0/0:7,0:7:15.05:0,15,391	0/0:11,0:11:24.05:0,24,479	0/0:7,0:7:17.42:0,17,381	0/0:28,0:28:84.26:0,84,2027	0/0:22,0:22:60.16:0,60,1340	0/0:19,0:19:54.19:0,54,1374	0/0:32,0:32:87.28:0,87,2048	0/0:15,0:15:45.12:0,45,1010	0/0:33,0:33:90.29:0,90,2151	0/0:25,0:25:72.22:0,72,1753	0/0:15,0:15:45.15:0,45,1112	1/1:0,25:23:60.21:1088,60,0	1/1:2,21:23:57.11:965,57,0	0/0:28,0:28:81.26:0,81,1996	0/0:13,0:13:39.11:0,39,866	0/0:21,0:21:57.03:0,57,1180	0/0:23,0:23:57.20:0,57,1458	0/0:18,0:18:44.92:0,45,999	0/0:20,0:20:57.18:0,57,1406	0/0:28,0:28:81.22:0,81,1971	0/0:14,0:14:42.14:0,42,1089	0/0:22,0:22:60.17:0,60,1432	0/0:13,0:13:33.10:0,33,810	0/0:16,0:16:48.12:0,48,1024	0/0:30,0:30:81.27:0,81,2032	0/0:38,0:37:99:0,111,2699	0/0:8,0:8:24.08:0,24,585
chr10	80437272	.	TTGTGTGTGTGTGTG	T	9828.40	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=2.824;DP=531;FS=7.543;HRun=0;HaplotypeScore=235.2911;InbreedingCoeff=0.8983;MQ=61.87;MQ0=7;MQRankSum=-5.453;QD=36.27;ReadPosRankSum=-0.244;VQSLOD=3.2707;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:30:11.63:0,12,266	1/1:2,4:7:8.95:217,9,0	0/0:36,0:19:12.04:0,12,348	0/0:33,0:19:15.05:0,15,384	1/1:7,17:25:32.90:678,33,0	0/0:7,0:18:12.43:0,12,229	0/0:13,0:20:6.86:0,7,259	1/1:26,0:26:6:58,6,0	0/0:15,0:16:39.13:0,39,2064	1/1:5,15:19:39.13:1401,39,0	1/1:5,6:11:11.99:363,12,0	0/0:20,0:21:54.12:0,54,3080	0/0:11,0:23:42.13:0,42,681	0/0:8,0:22:51.15:0,51,814	1/1:7,11:18:30.10:1079,30,0	1/1:6,9:15:21.07:775,21,0	1/1:9,7:16:15.05:566,15,0	1/1:4,2:7:6.02:216,6,0	1/1:12,7:19:21.03:624,21,0	1/1:11,9:20:24.03:767,24,0	1/1:13,6:20:9.03:273,9,0	0/0:5,0:6:9.03:0,9,434	0/0:14,0:16:30.09:0,30,1486	0/0:16,0:18:27.09:0,27,1348	1/1:5,10:17:27.09:901,27,0	1/1:12,13:27:39.08:1148,39,0	1/1:11,5:16:12.04:440,12,0	1/1:2,4:6:9.03:321,9,0
chr10	80437318	.	T	TTG	907.03	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.583;DP=578;FS=0.000;HRun=0;HaplotypeScore=185.3779;InbreedingCoeff=0.9197;MQ=52.91;MQ0=10;MQRankSum=-7.170;QD=21.60;ReadPosRankSum=-0.857;VQSLOD=3.5678;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:26.88:0,27,336	0/0:7,0:7:14.98:0,15,176	0/0:45,0:17:31.05:0,31,272	0/0:40,0:16:24.85:0,25,275	0/0:25,0:25:24.08:0,24,312	0/0:23,0:23:33.11:0,33,429	0/0:17,0:17:27.07:0,27,336	0/0:27,0:27:54.12:0,54,679	0/0:19,0:19:51.12:0,51,618	0/0:33,0:33:93.26:0,93,1183	0/0:24,0:24:60.08:0,60,765	0/0:29,0:29:66.13:0,66,783	1/1:4,13:17:30.04:402,30,0	1/1:5,20:25:42.14:627,42,0	0/0:17,0:17:27.09:0,27,351	0/0:16,0:16:33.11:0,33,429	0/0:17,0:17:32.90:0,33,407	0/0:10,0:10:24.08:0,24,312	0/0:18,0:18:45.59:0,46,556	0/0:20,0:19:36.12:0,36,468	0/0:10,0:10:12:0,12,136	0/0:7,0:7:21.07:0,21,273	0/0:17,0:17:33.08:0,33,414	0/0:16,0:16:33.11:0,33,429	0/0:26,0:26:42.12:0,42,530	0/0:26,0:26:69.22:0,69,887	0/0:17,0:17:33.11:0,33,429	0/0:5,0:5:6.02:0,6,78
chr10	80437338	.	ATGTATATATG	A	1906.64	PASS	AB=0.629;AC=3;AF=0.054;AN=56;BaseQRankSum=6.492;DP=514;FS=3.021;HRun=0;HaplotypeScore=218.3842;InbreedingCoeff=0.5781;MQ=60.23;MQ0=2;MQRankSum=-6.545;QD=45.40;ReadPosRankSum=-0.592;VQSLOD=3.2483;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:36.12:0,36,1687	0/0:7,0:7:15.05:0,15,704	0/0:14,0:10:21.47:0,21,261	0/0:13,0:6:17.89:0,18,265	0/0:20,0:20:36.12:0,36,1808	0/0:27,0:27:48.16:0,48,2494	0/0:15,0:15:39.05:0,39,1804	0/0:32,0:32:96.28:0,96,3568	0/0:17,0:17:51.04:0,51,2147	0/0:33,0:33:96.12:0,96,4553	0/0:27,0:27:72.25:0,72,3726	0/0:16,0:16:48.16:0,48,2354	1/1:11,9:20:9.09:723,9,0	0/1:9,13:22:99:1281,0,105	0/0:18,0:18:39.13:0,39,2099	0/0:17,0:17:36.12:0,36,1850	0/0:19,0:19:36.02:0,36,1259	0/0:13,0:13:36.10:0,36,1495	0/0:19,0:19:57.16:0,57,2085	0/0:20,0:19:42.14:0,42,2262	0/0:11,0:11:24.05:0,24,966	0/0:7,0:7:21.05:0,21,993	0/0:15,0:15:39.13:0,39,1817	0/0:13,0:13:32.91:0,33,1446	0/0:24,0:24:54.17:0,54,2626	0/0:26,0:26:66.19:0,66,3061	0/0:18,0:18:42.14:0,42,2158	0/0:7,0:7:21.07:0,21,1070
chr10	80437537	.	A	AGT	1250.56	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.005;DP=450;FS=8.568;HRun=0;HaplotypeScore=93.5425;InbreedingCoeff=0.9860;MQ=80.72;MQ0=0;MQRankSum=-4.317;QD=43.12;ReadPosRankSum=2.662;VQSLOD=5.2009;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:27.05:0,27,364	0/0:7,0:7:21.04:0,21,280	0/0:9,0:9:24.06:0,24,317	0/0:15,0:15:39.13:0,39,543	0/0:23,0:23:66.22:0,66,941	0/0:25,0:25:72.24:0,72,1030	0/0:9,0:9:27.08:0,27,368	0/0:19,0:19:51.17:0,51,731	0/0:18,0:18:51.17:0,51,731	0/0:26,0:26:69.21:0,69,942	0/0:18,0:18:48.14:0,48,643	0/0:10,0:10:27.09:0,27,387	1/1:1,17:18:51.17:933,51,0	1/1:2,9:11:24.08:439,24,0	0/0:19,0:19:54.18:0,54,774	0/0:15,0:15:42.14:0,42,602	0/0:19,0:19:51.17:0,51,731	0/0:6,0:6:15.05:0,15,215	0/0:17,0:17:48.15:0,48,670	0/0:19,0:19:54.17:0,54,756	0/0:15,0:15:45.15:0,45,645	0/0:16,0:16:45.15:0,45,645	0/0:20,0:20:54.17:0,54,756	0/0:13,0:13:39.11:0,39,539	0/0:13,0:13:39.13:0,39,559	0/0:19,0:19:57.19:0,57,817	0/0:18,0:18:51.17:0,51,731	0/0:23,0:23:69.23:0,69,988
chr10	80439372	.	AC	A	862.49	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.108;DP=578;FS=14.034;HRun=1;HaplotypeScore=60.4774;InbreedingCoeff=0.9620;MQ=80.47;MQ0=0;MQRankSum=-5.342;QD=27.82;ReadPosRankSum=0.974;VQSLOD=2.1126;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:80.30:0,80,1248	0/0:12,0:12:36.12:0,36,574	0/0:20,0:20:40.39:0,40,656	0/0:10,0:10:27.06:0,27,379	0/0:49,0:49:99:0,147,2215	0/0:32,0:32:93.30:0,93,1441	0/0:10,0:10:30.10:0,30,474	0/0:35,0:35:99:0,105,1612	0/0:13,0:13:39.10:0,39,572	0/0:29,0:29:87.23:0,87,1316	0/0:25,0:25:75.23:0,75,1151	0/0:15,0:15:45.15:0,45,713	1/1:2,15:17:46.70:557,47,0	1/1:2,12:14:36.03:427,36,0	0/0:27,0:27:75.24:0,75,1170	0/0:18,0:18:54.17:0,54,825	0/0:21,0:21:60.20:0,60,956	0/0:15,0:15:45.12:0,45,664	0/0:17,0:17:48.14:0,48,714	0/0:30,0:30:90.29:0,90,1405	0/0:5,0:5:15.01:0,15,190	0/0:12,0:12:36.12:0,36,574	0/0:23,0:23:69.21:0,69,1053	0/0:13,0:13:39.12:0,39,596	0/0:24,0:24:72.25:0,72,1148	0/0:30,0:30:90.31:0,90,1436	0/0:32,0:32:96.29:0,96,1471	0/0:3,0:3:9.03:0,9,143
chr10	80439858	.	GCA	G	952.81	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.997;DP=817;FS=21.534;HRun=0;HaplotypeScore=105.8210;InbreedingCoeff=0.9997;MQ=79.97;MQ0=0;MQRankSum=-9.019;QD=25.75;ReadPosRankSum=1.629;VQSLOD=3.0505;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,2405	0/0:18,0:18:54.17:0,54,1037	0/0:29,0:28:84.26:0,84,1470	0/0:30,1:31:81.20:0,81,1499	0/0:39,0:39:99:0,117,2314	0/0:42,0:42:99:0,126,2445	0/0:19,0:19:57.17:0,57,1095	0/0:40,0:40:99:0,120,2336	0/0:23,0:23:69.24:0,69,1318	0/0:36,0:36:99:0,108,2136	0/0:32,0:32:96.33:0,96,1897	0/0:25,0:25:75.26:0,75,1489	1/1:0,19:19:51.14:557,51,0	1/1:2,16:18:48.10:518,48,0	0/0:34,0:34:99:0,102,2058	0/0:23,0:23:69.22:0,69,1343	0/0:19,0:19:57.20:0,57,1143	0/0:16,0:16:42.14:0,42,828	0/0:21,0:21:63.22:0,63,1224	0/0:46,0:46:99:0,138,2734	0/0:32,0:32:93.32:0,93,1888	0/0:35,0:35:99:0,105,2098	0/0:41,0:41:99:0,123,2437	0/0:32,0:32:96.31:0,96,1870	0/0:28,0:28:84.29:0,84,1697	0/0:32,0:32:96.33:0,96,1942	0/0:33,0:33:99:0,99,1911	0/0:10,0:10:30.10:0,30,609
chr10	80439861	.	TACAC	T	1214.81	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.459;DP=824;FS=32.904;HRun=0;HaplotypeScore=140.4619;InbreedingCoeff=0.9997;MQ=80.22;MQ0=0;MQRankSum=-8.882;QD=32.83;ReadPosRankSum=1.321;VQSLOD=1.9669;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,117,2786	0/0:17,0:17:48.14:0,48,1235	0/0:29,0:28:78.25:0,78,1816	0/0:31,0:31:81.23:0,81,1882	0/0:39,0:39:99:0,111,2942	0/0:40,0:40:99:0,114,2981	0/0:19,0:19:57.16:0,57,1384	0/0:40,0:40:99:0,117,2896	0/0:21,0:21:57.20:0,57,1456	0/0:37,0:37:99:0,105,2669	0/0:32,0:32:96.30:0,96,2406	0/0:25,0:25:72.25:0,72,1889	1/1:0,19:19:51.17:695,51,0	1/1:3,15:18:48.14:641,48,0	0/0:36,0:36:99:0,108,2817	0/0:24,0:24:66.23:0,66,1717	0/0:19,0:19:57.20:0,57,1499	0/0:16,0:16:42.10:0,42,1024	0/0:23,0:23:60.21:0,60,1503	0/0:51,0:51:99:0,141,3578	0/0:34,0:34:99:0,99,2565	0/0:36,0:36:99:0,102,2688	0/0:42,0:42:99:0,123,3223	0/0:30,0:30:90.29:0,90,2319	0/0:28,0:28:84.29:0,84,2236	0/0:35,0:35:99:0,102,2669	0/0:30,0:30:90.30:0,90,2372	0/0:10,0:10:30.10:0,30,809
chr10	80440064	.	T	TAA	1577.67	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.279;DP=678;FS=3.407;HRun=0;HaplotypeScore=87.2169;InbreedingCoeff=0.9996;MQ=86.01;MQ0=0;MQRankSum=-7.586;QD=45.08;ReadPosRankSum=0.655;VQSLOD=5.1621;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.15:0,57,874	0/0:11,0:11:33.09:0,33,490	0/0:18,0:18:54.18:0,54,872	0/0:27,0:27:48.75:0,49,1172	0/0:37,0:37:99:0,111,1780	0/0:29,0:29:87.30:0,87,1419	0/0:13,0:13:39.13:0,39,636	0/0:37,0:36:99:0,108,1716	0/0:30,0:30:90.28:0,90,1417	0/0:37,0:37:99:0,108,1759	0/0:29,0:29:87.29:0,87,1394	0/0:28,0:28:81.26:0,81,1295	1/1:4,15:21:47.99:910,48,0	1/1:0,14:14:39.13:789,39,0	0/0:22,0:22:66.23:0,66,1074	0/0:26,0:26:78.25:0,78,1246	0/0:20,0:20:53.53:0,54,880	0/0:13,0:13:39.09:0,39,607	0/0:28,0:28:84.25:0,84,1322	0/0:34,0:34:99:0,99,1584	0/0:16,0:16:48.15:0,48,758	0/0:26,0:26:75.26:0,75,1224	0/0:30,0:30:84.26:0,84,1316	0/0:11,0:11:33.10:0,33,513	0/0:28,0:28:84.29:0,84,1371	0/0:32,0:32:93.31:0,93,1492	0/0:30,0:30:90.29:0,90,1444	0/0:12,0:12:36.12:0,36,587
chr10	80441746	.	TA	T	256.53	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.832;DP=527;FS=10.132;HRun=2;HaplotypeScore=52.8217;InbreedingCoeff=0.9338;MQ=72.82;MQ0=0;MQRankSum=-2.107;QD=25.65;ReadPosRankSum=1.059;VQSLOD=2.1935;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:27.09:351,27,0	0/0:13,0:13:39.13:0,39,584	0/0:10,0:10:27.07:0,27,363	0/0:11,0:11:29.50:0,29,339	0/0:28,0:28:78.23:0,78,1112	0/0:28,0:28:84.27:0,84,1240	0/0:9,0:9:27.09:0,27,403	0/0:30,0:30:81.27:0,81,1213	0/0:6,0:6:18.06:0,18,270	0/0:30,0:30:87.28:0,87,1285	0/0:34,0:34:99:0,102,1471	0/0:11,0:11:33.11:0,33,494	0/0:28,0:28:81.27:0,81,1213	0/0:16,0:16:48.16:0,48,718	0/0:20,0:20:60.20:0,60,899	0/0:13,0:13:39.13:0,39,584	0/0:20,0:20:57.18:0,57,830	0/0:15,0:15:42.14:0,42,629	0/0:21,0:21:63.20:0,63,904	0/0:28,0:28:84.28:0,84,1242	0/0:11,0:11:30.10:0,30,450	0/0:19,0:19:54.17:0,54,789	0/0:26,0:26:78.24:0,78,1128	0/0:3,0:3:9.03:0,9,135	0/0:22,0:22:66.22:0,66,989	0/0:31,0:31:90.30:0,90,1349	0/0:23,0:23:69.23:0,69,1034	0/0:11,0:11:33.11:0,33,495
chr10	80441912	.	G	GT	1901.55	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.518;DP=530;FS=1.917;HRun=1;HaplotypeScore=48.6878;InbreedingCoeff=0.9868;MQ=82.24;MQ0=0;MQRankSum=-3.587;QD=39.62;ReadPosRankSum=-0.104;VQSLOD=3.8757;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:30.10:0,30,389	0/0:5,0:5:15.05:0,15,195	0/0:15,0:15:42.12:0,42,522	0/0:15,0:15:32.98:0,33,459	0/0:32,0:32:96.28:0,96,1216	0/0:23,0:23:69.22:0,69,896	0/0:8,0:8:24.06:0,24,298	0/0:27,0:26:81.26:0,81,1052	0/0:15,0:15:45.11:0,45,553	0/0:26,0:26:66.21:0,66,857	0/0:20,0:20:60.18:0,60,766	0/0:20,0:20:60.20:0,60,779	1/1:1,21:22:63.21:944,63,0	1/1:1,25:26:72.24:1079,72,0	0/0:22,0:22:66.21:0,66,855	0/0:21,0:21:60.19:0,60,779	0/0:9,0:9:27.09:0,27,351	0/0:9,0:9:24.08:0,24,312	0/0:15,0:15:45.14:0,45,571	0/0:20,0:20:54.18:0,54,701	0/0:20,0:20:60.18:0,60,762	0/0:21,0:21:57.18:0,57,739	0/0:30,0:30:90.28:0,90,1154	0/0:17,0:17:51.17:0,51,662	0/0:20,0:20:57.17:0,57,727	0/0:29,0:29:87.28:0,87,1129	0/0:24,0:23:72.23:0,72,933	0/0:8,0:8:21.07:0,21,273
chr10	80442510	.	AT	A	683.26	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.998;DP=452;FS=9.254;HRun=9;HaplotypeScore=48.3460;InbreedingCoeff=0.8614;MQ=78.07;MQ0=2;MQRankSum=-1.330;QD=17.98;ReadPosRankSum=0.393;VQSLOD=3.2022;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:10:24.01:219,24,0	0/0:8,0:8:18.05:0,18,208	0/0:19,0:16:9.08:0,9,295	0/0:24,0:16:8.04:0,8,235	0/0:24,0:24:66.07:0,66,729	1/1:3,14:17:39.01:357,39,0	1/1:2,9:11:27.01:247,27,0	0/0:30,0:30:60.15:0,60,672	0/0:12,0:12:36.08:0,36,397	0/0:14,0:14:42.12:0,42,479	0/0:19,0:19:51.06:0,51,554	0/0:13,0:14:35.94:0,36,395	0/0:33,0:33:0:0,0,0	0/0:20,0:20:0:0,0,0	0/0:17,0:16:40.32:0,40,438	0/0:14,0:13:36.11:0,36,415	0/0:20,0:20:60.18:0,60,692	0/0:13,0:13:39.10:0,39,439	0/0:19,0:19:45.12:0,45,508	0/0:10,0:10:27.08:0,27,312	0/0:7,0:7:18.05:0,18,207	0/0:15,0:15:24.06:0,24,267	0/0:16,0:16:42.06:0,42,461	0/0:7,0:7:18.05:0,18,208	0/0:9,0:9:24.05:0,24,265	0/0:13,0:13:30.09:0,30,346	0/0:26,0:27:72:0,72,786	0/0:9,0:9:27.08:0,27,312
chr10	80456664	.	TAAGGCACGCTTGCACTTTCAC	T	1996.26	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.782;DP=563;FS=32.695;HRun=0;HaplotypeScore=293.0882;InbreedingCoeff=0.9337;MQ=77.45;MQ0=0;MQRankSum=-5.781;QD=99.81;ReadPosRankSum=2.795;VQSLOD=2.1998;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.04:0,93,6599	0/0:6,0:5:15.05:0,15,1343	0/0:16,0:16:39.13:0,39,1842	0/0:16,0:16:45.10:0,45,1991	0/0:19,0:19:54.19:0,54,4775	0/0:17,0:17:48.13:0,48,3214	0/0:11,0:11:33:0,33,1948	0/0:32,0:31:96.32:0,96,6595	0/0:28,0:28:72.25:0,72,6259	0/0:24,0:24:69.22:0,69,5560	0/0:23,0:23:63.21:0,63,4863	0/0:28,0:28:72.25:0,72,5591	1/1:2,2:4:6.02:351,6,0	1/1:0,16:16:30.10:1757,30,0	0/0:26,0:26:69.24:0,69,6365	0/0:20,0:20:57.19:0,57,5284	0/0:27,0:27:75.13:0,75,4733	0/0:19,0:19:54.11:0,54,3160	0/0:26,0:26:72.23:0,72,4624	0/0:26,0:26:78.22:0,78,6947	0/0:31,0:31:87.28:0,87,6693	0/0:18,0:18:48.15:0,48,3475	0/0:10,0:10:30.10:0,30,2306	0/0:17,0:16:42.14:0,42,3745	0/0:9,0:9:24.08:0,24,1987	0/0:23,0:23:66.15:0,66,5523	0/0:22,0:22:63.22:0,63,4946	0/0:17,0:17:51.18:0,51,5057
chr10	80457330	.	G	GA	8500.40	PASS	AB=0.583;AC=33;AF=0.589;AN=56;BaseQRankSum=2.141;DP=471;FS=0.000;HRun=8;HaplotypeScore=74.9636;InbreedingCoeff=0.9243;MQ=64.82;MQ0=1;MQRankSum=-2.272;QD=28.15;ReadPosRankSum=0.760;VQSLOD=5.1655;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:57.15:647,57,0	0/1:2,5:7:12.42:123,0,12	0/0:12,0:10:26.69:0,27,227	0/0:6,0:5:14.98:0,15,130	1/1:2,17:18:48.14:554,48,0	0/0:13,0:13:33.01:0,33,302	0/0:6,0:6:18.01:0,18,165	1/1:8,21:29:63.13:701,63,0	0/0:20,0:20:54.01:0,54,490	1/1:5,9:14:27.08:311,27,0	1/1:0,9:9:24.03:262,24,0	0/0:11,0:11:30.01:0,30,275	0/0:26,0:26:72.04:0,72,658	0/0:19,0:19:57.03:0,57,521	1/1:0,15:15:42.12:485,42,0	1/1:1,9:10:24.07:277,24,0	1/1:1,20:21:48.14:554,48,0	1/1:1,6:7:18.05:208,18,0	1/1:0,9:9:24.07:277,24,0	1/1:2,20:22:51.15:588,51,0	1/1:0,21:21:48.10:539,48,0	0/0:14,0:14:39.01:0,39,357	0/0:21,0:21:60.03:0,60,549	0/0:21,0:21:54.01:0,54,494	1/1:0,25:25:69.21:796,69,0	1/1:1,18:19:54.16:623,54,0	1/1:2,34:36:90.74:1036,91,0	1/1:0,16:16:45.13:519,45,0
chr10	80457731	.	AG	A	1898.62	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.401;DP=660;FS=1.688;HRun=3;HaplotypeScore=219.0467;InbreedingCoeff=0.9604;MQ=78.78;MQ0=0;MQRankSum=-5.327;QD=32.18;ReadPosRankSum=-0.504;VQSLOD=2.4232;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:75.25:0,75,1079	0/0:7,0:7:21.07:0,21,294	0/0:21,0:21:60.20:0,60,855	0/0:29,0:29:77.84:0,78,1045	0/0:31,0:31:66:0,66,1028	0/0:29,0:29:72.24:0,72,1027	0/0:18,0:18:51.17:0,51,733	0/0:39,0:39:99:0,114,1570	0/0:19,0:19:57.19:0,57,818	0/0:37,0:37:99:0,111,1585	0/0:28,0:28:75.25:0,75,1077	0/0:20,0:20:57.19:0,57,819	1/1:2,26:28:81.24:983,81,0	1/1:0,31:31:84.26:1037,84,0	0/0:31,0:31:78.26:0,78,1120	0/0:16,0:16:45.15:0,45,646	0/0:7,0:7:18.06:0,18,259	0/0:3,0:3:9.03:0,9,129	0/0:32,0:32:90.25:0,90,1234	0/0:37,0:37:99:0,105,1508	0/0:17,0:17:20.89:0,21,407	0/0:23,0:23:69.23:0,69,992	0/0:22,0:22:66.22:0,66,943	0/0:22,0:22:57.19:0,57,821	0/0:11,0:11:21.03:0,21,279	0/0:26,0:26:75.25:0,75,1079	0/0:32,0:31:75.05:0,75,1059	0/0:11,0:11:27.09:0,27,388
chr10	80457753	.	A	AAGTAGTTTCACAG	75812.93	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=-2.814;DP=691;FS=2.536;HRun=0;HaplotypeScore=220.0501;InbreedingCoeff=0.8472;MQ=71.55;MQ0=0;MQRankSum=-16.230;QD=133.24;ReadPosRankSum=0.746;VQSLOD=5.0779;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,9:31:63.22:2955,63,0	1/1:4,3:9:18.06:1020,18,0	0/0:16,0:16:45.06:0,45,1434	0/0:25,0:25:61.96:0,62,1775	1/1:16,17:37:84.29:4078,84,0	1/1:17,15:35:88.46:4887,88,0	1/1:13,2:17:1.08:1627,1,0	1/1:31,9:48:99:6663,135,0	0/0:17,0:17:51.16:0,51,1806	1/1:16,28:46:99:8228,135,0	1/1:9,17:31:72.25:3945,72,0	0/1:20,0:20:99:138,0,2136	1/1:14,15:30:81.26:4354,81,0	1/1:13,13:27:72.25:4159,72,0	1/1:11,19:34:84.29:4958,84,0	1/1:8,13:21:63.22:3561,63,0	1/1:2,6:9:24.08:1458,24,0	1/1:3,0:3:8.99:175,9,0	1/1:14,11:26:72.25:4132,72,0	1/1:7,20:33:93.32:5141,93,0	1/1:9,5:16:30.10:1599,30,0	0/0:21,0:21:63.22:0,63,2366	0/0:26,0:26:78.27:0,78,2977	0/0:17,0:17:42.14:0,42,1518	1/1:11,5:21:45.15:2455,45,0	1/1:10,9:23:66.21:3208,66,0	1/1:12,16:33:81.10:4713,81,0	1/1:3,11:17:36.12:2359,36,0
chr10	80458690	.	A	ACTT	1933.44	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.762;DP=505;FS=1.485;HRun=0;HaplotypeScore=95.7011;InbreedingCoeff=0.9870;MQ=82.75;MQ0=0;MQRankSum=-4.676;QD=55.24;ReadPosRankSum=0.623;VQSLOD=5.8010;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:51.10:0,51,848	0/0:5,0:5:15.04:0,15,250	0/0:20,0:20:53.34:0,53,964	0/0:17,0:17:30.63:0,31,581	0/0:21,0:21:45.15:0,45,833	0/0:18,0:18:45.14:0,45,809	0/0:20,0:20:48.15:0,48,862	0/0:21,0:21:60.17:0,60,1000	0/0:9,0:9:24.07:0,24,411	0/0:14,0:14:39.13:0,39,711	0/0:21,0:21:57.19:0,57,1049	0/0:14,0:14:42.14:0,42,775	1/1:0,15:15:45.15:1101,45,0	1/1:1,19:20:39.13:954,39,0	0/0:11,0:11:24.08:0,24,446	0/0:10,0:10:30.10:0,30,531	0/0:16,0:16:42.14:0,42,773	0/0:13,0:13:21.07:0,21,390	0/0:21,0:21:63.18:0,63,1067	0/0:19,0:19:54.17:0,54,966	0/0:14,0:14:39.12:0,39,694	0/0:19,0:19:57.20:0,57,1059	0/0:26,0:26:72.23:0,72,1302	0/0:23,0:23:69.21:0,69,1235	0/0:26,0:26:69.22:0,69,1221	0/0:31,0:31:87.29:0,87,1622	0/0:21,0:21:57.13:0,57,974	0/0:11,0:11:33.09:0,33,580
chr10	80458724	.	GTGTT	G	333.18	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=4.693;DP=508;FS=3.169;HRun=0;HaplotypeScore=126.5798;InbreedingCoeff=0.5236;MQ=59.00;MQ0=13;MQRankSum=-4.205;QD=5.21;ReadPosRankSum=-5.673;VQSLOD=-0.0581;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:5.06:0,5,489	0/0:5,0:5:14.93:0,15,177	0/0:20,0:10:26.51:0,27,265	0/0:20,0:14:22.83:0,23,247	0/0:19,0:19:38.86:0,39,456	0/0:20,0:19:36.09:0,36,570	0/0:20,0:20:33.10:0,33,644	0/0:22,0:22:17.34:0,17,802	0/0:14,0:14:39.11:0,39,806	0/0:13,0:13:17.30:0,17,509	0/0:19,0:19:6.61:0,7,374	0/0:17,0:17:48.13:0,48,1113	1/1:12,4:14:28.68:256,29,0	1/1:14,7:21:17.48:179,17,0	0/0:10,0:10:14.99:0,15,165	0/1:7,0:7:21.49:21,0,114	0/0:20,0:19:36.05:0,36,523	0/0:13,0:13:1.26:0,1,188	0/0:17,0:16:26.39:0,26,478	0/0:13,0:13:13.96:0,14,350	0/1:20,0:19:7.26:7,0,346	0/0:16,0:16:45.08:0,45,1043	0/0:25,0:25:65.97:0,66,1334	0/0:32,0:31:93.18:0,93,1929	0/0:22,0:22:25.33:0,25,592	0/0:25,0:26:78.12:0,78,1182	0/0:16,0:15:33.07:0,33,553	0/0:11,0:11:27.03:0,27,401
chr10	80458728	.	T	TTGTGTG	8246.65	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-2.228;DP=531;FS=9.333;HRun=0;HaplotypeScore=126.5760;InbreedingCoeff=0.6784;MQ=57.88;MQ0=15;MQRankSum=-5.036;QD=20.21;ReadPosRankSum=-2.650;VQSLOD=2.9121;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:5.55:274,6,0	1/1:2,2:5:6.02:138,6,0	0/0:22,0:10:2.89:0,3,42	0/1:23,0:13:0:0,0,0	1/1:6,14:21:9.03:296,9,0	1/1:7,1:22:14.32:252,14,0	1/1:2,0:17:5.59:297,6,0	1/1:20,0:20:24.01:354,24,0	0/0:14,0:14:27.09:0,27,536	1/1:4,8:13:24.07:515,24,0	1/1:5,13:23:29.60:538,30,0	0/0:16,0:16:39.11:0,39,748	0/1:15,0:13:7.67:8,0,109	0/1:22,0:22:6.28:6,0,112	1/1:4,6:10:6.02:197,6,0	1/1:5,2:10:6.02:76,6,0	1/1:7,12:20:21.07:681,21,0	1/1:4,9:13:9.03:236,9,0	1/1:13,4:20:29.29:357,29,0	1/1:4,10:14:18.06:471,18,0	1/1:22,1:21:18.96:355,19,0	0/0:13,0:15:36.11:0,36,699	0/0:23,0:23:32.93:0,33,695	0/0:31,0:32:66.20:0,66,1263	1/1:7,13:25:27.09:687,27,0	1/1:10,14:28:46.81:1364,47,0	1/1:5,9:16:28.81:651,29,0	1/1:3,8:11:15.05:495,15,0
chr10	80458749	.	T	TGTGTGC	6595.54	PASS	AB=0.987;AC=24;AF=0.429;AN=56;BaseQRankSum=7.320;DP=489;FS=3.930;HRun=0;HaplotypeScore=122.8631;InbreedingCoeff=-0.1834;MQ=54.16;MQ0=14;MQRankSum=-7.405;QD=19.34;ReadPosRankSum=1.816;VQSLOD=4.1359;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,23:32:11.51:477,12,0	0/1:8,0:8:80.22:97,0,80	0/0:13,0:5:12.12:0,12,76	0/0:14,0:5:8.45:0,8,45	0/1:18,0:18:54.45:227,0,54	0/1:20,0:19:81.37:191,0,81	0/1:22,0:22:78.13:273,0,78	0/1:15,0:15:55.20:219,0,55	0/0:11,0:11:27.09:0,27,653	0/1:13,0:12:43.97:387,0,44	0/1:25,0:25:35.30:354,0,35	0/0:17,0:17:48.12:0,48,924	0/1:13,0:11:10.79:11,0,78	0/0:23,0:23:9.06:0,9,108	0/1:8,0:8:15.78:152,0,16	0/1:7,1:8:37.63:63,0,38	1/1:16,1:16:23.82:658,24,0	0/1:12,0:12:26.89:158,0,27	0/1:16,0:15:52.40:249,0,52	0/1:19,0:19:99:328,0,112	0/1:23,0:21:99:258,0,112	0/0:16,0:16:42.10:0,42,856	0/0:17,0:17:48:0,48,843	0/0:36,0:36:90.17:0,90,1676	0/1:25,1:26:38.35:548,0,38	1/1:19,0:19:23.13:1001,23,0	0/1:16,0:16:14.30:546,0,14	1/1:10,0:10:15.05:398,15,0
chr10	80458766	.	GTT	G	285.49	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.944;DP=522;FS=2.213;HRun=3;HaplotypeScore=106.2058;InbreedingCoeff=0.9579;MQ=57.81;MQ0=6;MQRankSum=-2.487;QD=10.20;ReadPosRankSum=0.935;VQSLOD=0.4394;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:26.90:0,27,330	0/0:7,0:7:21.06:0,21,361	0/0:22,0:11:13.48:0,13,291	0/0:21,0:8:17.08:0,17,223	0/0:20,0:20:41.99:0,42,610	0/0:21,0:20:39.08:0,39,663	0/0:20,0:20:51.15:0,51,867	0/0:21,0:21:63.14:0,63,955	0/0:11,0:11:33.11:0,33,637	0/0:14,0:14:42.13:0,42,772	0/0:26,0:26:68.21:0,68,1090	0/0:19,0:19:57.20:0,57,1072	1/1:7,6:13:26.75:284,27,0	1/1:7,8:15:14.05:119,14,0	0/0:10,0:10:27.05:0,27,471	0/0:14,0:14:30.10:0,30,573	0/0:16,0:16:23.44:0,23,260	0/0:8,0:8:20.95:0,21,312	0/0:19,0:18:54.15:0,54,946	0/0:21,0:21:63.11:0,63,1058	0/0:26,0:25:66.86:0,67,1140	0/0:17,0:17:48.13:0,48,844	0/0:15,0:15:45.15:0,45,836	0/0:45,0:44:99:0,123,2339	0/0:27,0:27:61.09:0,61,990	0/0:21,0:21:58.26:0,58,869	0/0:15,0:14:35.61:0,36,536	0/0:10,0:10:15.01:0,15,251
chr10	80458900	.	AG	A	1583.07	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.085;DP=563;FS=1.192;HRun=3;HaplotypeScore=59.2247;InbreedingCoeff=0.9835;MQ=85.61;MQ0=0;MQRankSum=-3.935;QD=31.04;ReadPosRankSum=0.877;VQSLOD=3.4872;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.20:0,84,1179	0/0:4,0:4:12.04:0,12,173	0/0:20,0:20:60.02:0,60,773	0/0:18,0:18:47.49:0,47,547	0/0:28,0:28:81.27:0,81,1161	0/0:24,0:24:72.23:0,72,1019	0/0:17,0:17:51.15:0,51,715	0/0:37,0:37:99:0,105,1511	0/0:10,0:10:30.10:0,30,431	0/0:23,0:23:69.23:0,69,994	0/0:18,0:18:54.17:0,54,758	0/0:22,0:22:66.22:0,66,950	1/1:1,26:27:72.23:889,72,0	1/1:0,24:24:66.21:816,66,0	0/0:13,0:13:36.05:0,36,493	0/0:11,0:11:30.10:0,30,431	0/0:22,0:22:66.19:0,66,928	0/0:12,0:12:30.06:0,30,409	0/0:19,0:19:56:0,56,782	0/0:22,0:22:66.22:0,66,950	0/0:19,0:19:48.13:0,48,654	0/0:13,0:13:39.13:0,39,558	0/0:17,0:17:51.17:0,51,734	0/0:15,0:15:45.15:0,45,645	0/0:13,0:13:39.13:0,39,562	0/0:23,0:23:69.23:0,69,985	0/0:37,0:37:99:0,105,1509	0/0:26,0:26:78.26:0,78,1122
chr10	80459379	.	A	ATAGATAGG	664.04	PASS	AB=0.768;AC=4;AF=0.071;AN=56;BaseQRankSum=-1.888;DP=675;FS=6.844;HRun=0;HaplotypeScore=248.5350;InbreedingCoeff=0.4024;MQ=56.40;MQ0=5;MQRankSum=2.315;QD=6.39;ReadPosRankSum=0.021;VQSLOD=1.4969;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:39:25.14:25,0,200	0/0:10,0:10:15.85:0,16,175	0/0:15,0:7:2.97:0,3,20	0/0:15,0:13:14.83:0,15,119	0/0:27,0:27:60.06:0,60,993	0/0:18,0:18:45.04:0,45,715	0/0:13,0:13:15.01:0,15,177	0/0:34,0:33:77.53:0,78,668	0/0:24,0:24:71.43:0,71,1108	0/0:30,0:28:69.52:0,70,1114	0/0:17,0:16:30.03:0,30,495	0/0:27,0:27:75.12:0,75,1311	0/1:4,26:30:18.38:116,0,18	1/1:34,1:34:18.01:637,18,0	0/0:25,0:25:45.01:0,45,639	0/0:32,0:32:69.01:0,69,1135	0/0:21,0:21:27.28:0,27,624	0/0:22,0:22:53.94:0,54,797	0/0:23,0:23:69.03:0,69,1018	0/0:36,0:36:74.97:0,75,1148	0/0:23,0:23:26.83:0,27,308	0/0:23,0:23:60.10:0,60,1231	0/0:22,0:22:57.09:0,57,997	0/0:26,0:25:45:0,45,744	0/0:14,0:14:24.04:0,24,421	0/0:39,0:38:92.89:0,93,1064	0/0:28,0:27:68.66:0,69,997	0/0:7,0:6:15.27:0,15,94
chr10	80459505	.	A	ATG	1187.78	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.157;DP=729;FS=3.561;HRun=0;HaplotypeScore=134.3500;InbreedingCoeff=0.8393;MQ=62.01;MQ0=0;MQRankSum=-1.257;QD=22.00;ReadPosRankSum=0.916;VQSLOD=4.1908;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:62.13:0,62,776	0/0:12,0:12:30.10:0,30,386	0/0:30,0:17:11.43:0,11,173	0/0:33,0:20:14.88:0,15,262	0/0:23,0:23:60.18:0,60,754	0/0:25,0:25:51.14:0,51,627	0/0:28,0:27:55.05:0,55,680	0/0:33,0:33:72.15:0,72,886	0/0:29,0:29:75.24:0,75,955	0/0:33,0:33:78.17:0,78,986	0/0:26,0:26:54.16:0,54,682	0/0:35,0:35:77.88:0,78,1001	1/1:5,18:23:0.96:535,1,0	1/1:7,24:31:45.15:759,45,0	0/0:28,0:28:66.33:0,66,821	0/0:31,0:31:75.22:0,75,936	0/0:26,0:26:54.17:0,54,694	0/0:11,0:11:30.10:0,30,386	0/0:19,0:19:42.11:0,42,513	0/0:19,0:19:42.13:0,42,540	0/0:46,0:46:99:0,105,1321	0/0:23,0:23:57.13:0,57,718	0/0:19,0:19:42.12:0,42,525	0/0:25,0:25:48.06:0,48,617	0/0:18,0:18:54.18:0,54,695	0/0:25,0:25:63.20:0,63,810	0/0:30,0:30:75.07:0,75,958	0/0:9,0:9:24.08:0,24,309
chr10	80459553	.	C	CAGACAGAG	1166.83	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.404;DP=736;FS=11.353;HRun=0;HaplotypeScore=195.0468;InbreedingCoeff=0.9816;MQ=61.50;MQ0=16;MQRankSum=-1.547;QD=22.44;ReadPosRankSum=-3.305;VQSLOD=1.9045;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:45.89:0,46,1036	0/0:6,0:6:12.04:0,12,304	0/0:50,0:19:26.05:0,26,452	0/0:71,0:36:40.89:0,41,595	0/0:22,0:22:66.11:0,66,1414	0/0:17,0:17:48.12:0,48,1137	0/0:23,0:22:50.15:0,50,865	0/0:40,0:36:96.15:0,96,1634	0/0:26,0:26:78.23:0,78,1925	0/0:28,0:27:67.36:0,67,1905	0/0:20,0:20:60.16:0,60,1510	0/0:24,0:24:72.22:0,72,1771	1/1:20,5:26:39.13:827,39,0	1/1:20,6:26:28.38:461,28,0	0/0:30,0:30:63.61:0,64,1443	0/0:25,0:25:66.14:0,66,1486	0/0:23,0:23:51.15:0,51,1331	0/0:10,0:10:30.04:0,30,664	0/0:20,0:19:47.89:0,48,1174	0/0:20,0:20:54.08:0,54,1348	0/0:39,0:38:96.20:0,96,2212	0/0:29,0:29:72.21:0,72,1839	0/0:22,0:22:60.16:0,60,1512	0/0:33,0:33:81.03:0,81,1902	0/0:10,0:10:30.09:0,30,776	0/0:26,0:25:49.25:0,49,1342	0/0:22,0:22:63.12:0,63,1400	0/0:8,0:8:23.73:0,24,449
chr10	80461308	.	GCA	G	479.97	PASS	AB=0.922;AC=17;AF=0.340;AN=50;BaseQRankSum=3.706;DP=544;FS=3.703;HRun=0;HaplotypeScore=76.9454;InbreedingCoeff=0.3477;MQ=50.26;MQ0=42;MQRankSum=-2.405;QD=2.22;ReadPosRankSum=0.882;VQSLOD=1.6798;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,5:31:14.86:145,15,0	./.	./.	./.	0/0:13,0:20:8.36:0,8,126	1/1:8,0:17:14.20:70,14,0	1/1:16,0:26:5.68:28,6,0	0/0:19,0:11:3.01:0,3,37	0/0:23,2:25:0.39:0,0,411	0/0:19,0:17:19.76:0,20,230	1/1:4,0:9:0.47:1,0,0	0/1:20,0:19:8.53:9,0,263	1/1:8,10:20:11.59:93,12,0	1/1:9,14:23:21.06:228,21,0	0/0:4,0:10:8.70:0,9,92	0/0:10,0:17:6:0,6,53	0/1:17,6:21:22.35:22,0,60	0/0:20,0:23:6.86:0,7,274	0/0:16,0:13:17.91:0,18,211	0/0:11,0:13:17.62:0,18,179	0/0:39,0:36:26.90:0,27,346	0/1:11,2:13:26.69:27,0,39	0/0:12,0:12:3:0,3,27	0/0:34,7:42:7.82:0,8,583	0/0:5,0:10:3.01:0,3,45	0/0:21,0:20:23.50:0,23,276	0/1:15,1:20:11.71:12,0,173	0/1:9,0:9:2.57:3,0,18
chr10	80461881	.	T	TTA	5989.39	PASS	AB=0.588;AC=37;AF=0.712;AN=52;BaseQRankSum=-5.509;DP=226;FS=1.713;HRun=0;HaplotypeScore=26.7475;InbreedingCoeff=0.7049;MQ=71.47;MQ0=2;MQRankSum=-0.426;QD=33.27;ReadPosRankSum=0.402;VQSLOD=5.9165;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:11:17.93:150,18,0	1/1:0,5:4:9.03:149,9,0	0/0:8,0:6:3.82:0,4,93	0/0:8,0:6:3.01:0,3,36	1/1:1,6:7:15.05:248,15,0	0/0:8,0:8:18.06:0,18,225	./.	1/1:11,24:36:75.24:1205,75,0	0/0:5,0:5:9.03:0,9,113	1/1:1,5:6:15.03:221,15,0	1/1:4,3:7:9.03:148,9,0	0/0:6,0:6:18.06:0,18,225	1/1:1,2:3:6.02:99,6,0	1/1:2,6:8:12.04:198,12,0	1/1:0,4:4:12.04:198,12,0	1/1:2,3:5:6.02:99,6,0	1/1:3,18:21:51.17:842,51,0	0/1:3,7:10:50.96:263,0,51	1/1:1,6:7:18.06:297,18,0	1/1:0,4:4:12.04:187,12,0	1/1:1,0:1:3.01:50,3,0	0/0:3,0:3:9.03:0,9,113	0/0:7,0:7:12.04:0,12,150	./.	1/1:2,11:13:27.09:446,27,0	1/1:2,6:9:18.06:297,18,0	1/1:1,8:10:21.07:346,21,0	1/1:0,13:13:33.11:545,33,0
chr10	80462282	.	C	CG	9099.12	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-11.009;DP=552;FS=6.000;HRun=5;HaplotypeScore=57.4464;InbreedingCoeff=0.9863;MQ=73.08;MQ0=0;MQRankSum=-2.742;QD=31.06;ReadPosRankSum=0.614;VQSLOD=5.4032;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,114,1196	1/1:2,5:7:9.03:118,9,0	0/0:15,0:15:33.02:0,33,327	0/0:15,0:15:36.09:0,36,381	1/1:1,15:16:36.12:473,36,0	0/0:15,0:15:39.03:0,39,404	0/0:21,0:21:60.09:0,60,625	1/1:5,14:19:42.12:538,42,0	0/0:19,0:19:44.98:0,45,454	1/1:0,21:21:63.20:828,63,0	1/1:1,13:14:42.05:524,42,0	0/0:15,0:15:42.10:0,42,451	0/0:27,0:27:78.16:0,78,825	0/0:23,0:23:63.16:0,63,677	1/1:0,24:24:60.19:777,60,0	1/1:1,29:30:69.22:905,69,0	1/1:3,26:29:78.17:996,78,0	1/1:5,17:22:48.16:631,48,0	1/1:2,11:13:33.09:409,33,0	1/1:0,9:9:18.02:217,18,0	1/1:2,21:23:54.18:710,54,0	0/0:15,0:15:36.09:0,36,387	0/0:15,0:15:42.08:0,42,441	0/0:37,0:37:99:0,99,1054	1/1:1,12:13:33.11:434,33,0	1/1:2,16:18:48.16:632,48,0	1/1:6,21:27:57.19:750,57,0	1/1:1,7:8:12.04:158,12,0
chr10	80463701	.	TG	T	1292.98	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.367;DP=662;FS=2.714;HRun=2;HaplotypeScore=115.4050;InbreedingCoeff=0.9820;MQ=72.86;MQ0=1;MQRankSum=-1.334;QD=26.94;ReadPosRankSum=3.097;VQSLOD=3.5232;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:14.09:0,14,85	0/0:6,0:6:18.03:0,18,227	0/0:39,0:28:64.39:0,64,538	0/0:22,0:16:25.23:0,25,292	0/0:41,0:41:99:0,121,1504	0/0:23,0:23:28.76:0,29,232	0/0:16,0:16:26.97:0,27,235	0/0:30,0:31:71.81:0,72,780	0/0:23,0:23:59.43:0,59,735	0/0:36,0:36:99:0,103,1178	0/0:30,0:30:87.15:0,87,1131	0/0:14,0:14:39.60:0,40,562	1/1:0,27:27:69.22:880,69,0	1/1:0,21:21:42.13:534,42,0	0/0:21,0:21:61.96:0,62,800	0/0:22,0:22:66.16:0,66,883	0/0:24,0:24:65.30:0,65,749	0/0:17,0:17:48.15:0,48,674	0/0:18,0:18:45.19:0,45,627	0/0:26,0:26:75.12:0,75,924	0/0:17,0:18:51.09:0,51,641	0/0:20,0:20:60.19:0,60,860	0/0:15,0:15:45.07:0,45,543	0/0:24,0:24:57.79:0,58,749	0/0:27,0:27:70.70:0,71,871	0/0:24,0:24:58.41:0,58,764	0/0:34,0:34:95.68:0,96,1212	0/0:16,0:16:20.71:0,21,552
chr10	80463703	.	GT	G	811.80	PASS	AB=0.889;AC=9;AF=0.161;AN=56;BaseQRankSum=8.366;DP=670;FS=2.634;HRun=12;HaplotypeScore=117.5028;InbreedingCoeff=0.6090;MQ=73.35;MQ0=1;MQRankSum=0.073;QD=5.34;ReadPosRankSum=4.461;VQSLOD=2.2214;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:53.78:418,54,0	0/0:7,0:7:15.02:0,15,146	0/0:41,0:29:32.53:0,33,284	0/1:21,1:17:0.75:1,0,117	0/0:39,1:41:54.80:0,55,838	0/0:3,0:25:25.28:0,25,129	0/0:3,0:18:17.04:0,17,86	0/1:24,4:30:34.27:34,0,381	0/0:24,0:24:18.78:0,19,499	0/0:31,2:37:30.17:0,30,640	0/0:28,0:29:74.67:0,75,726	0/0:12,1:14:18.68:0,19,356	1/1:27,0:27:64.05:306,64,0	1/1:21,0:21:39.20:193,39,0	0/0:22,0:22:62.88:0,63,591	0/0:22,0:22:54.11:0,54,548	0/0:24,0:25:44.94:0,45,455	0/0:17,0:17:45.03:0,45,437	0/0:15,0:17:47.76:0,48,451	0/0:27,0:28:69.83:0,70,666	0/0:15,0:18:50.27:0,50,443	0/0:21,0:21:62.58:0,63,597	0/0:14,0:15:32.90:0,33,319	0/1:18,4:23:12.79:13,0,404	0/0:19,1:26:39.25:0,39,516	0/0:22,2:24:4.65:0,5,398	0/0:27,3:31:37.54:0,38,712	0/0:15,1:16:9.25:0,9,326
chr10	80468398	.	G	GACAGTTCTCC	56805.80	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-7.517;DP=585;FS=1.269;HRun=0;HaplotypeScore=133.1779;InbreedingCoeff=0.9855;MQ=67.34;MQ0=0;MQRankSum=-15.061;QD=122.43;ReadPosRankSum=0.424;VQSLOD=5.7026;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,4:9:15.05:785,15,0	1/1:5,4:9:24.08:1151,24,0	0/0:20,0:20:51.17:0,51,1452	0/0:13,0:13:23.87:0,24,552	1/1:7,25:35:81.28:3997,81,0	1/1:8,17:25:72.25:3587,72,0	1/1:6,7:16:39.13:1939,39,0	1/1:13,9:28:81.25:3474,81,0	0/0:27,0:27:81.26:0,81,2540	1/1:6,16:24:72.25:3592,72,0	1/1:5,17:22:57.20:2850,57,0	0/0:11,0:11:33.11:0,33,1101	1/1:7,15:24:63.22:2929,63,0	1/1:9,10:20:51.18:2449,51,0	1/1:5,14:23:48.16:2351,48,0	1/1:10,7:19:42.14:1799,42,0	1/1:0,10:14:27.09:1436,27,0	1/1:4,9:15:33.07:1602,33,0	1/1:8,11:21:57.20:2541,57,0	1/1:10,25:35:96.33:4756,96,0	1/1:2,2:6:9.03:479,9,0	0/0:14,0:14:42.14:0,42,1381	0/0:21,0:21:63.22:0,63,2038	0/0:15,0:15:42.14:0,42,1344	1/1:6,18:28:69.24:3533,69,0	1/1:11,23:36:99:5257,108,0	1/1:10,26:41:96.33:4653,96,0	1/1:7,6:14:36.12:1647,36,0
chr10	80469770	.	A	AT	7035.53	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-13.555;DP=514;FS=5.530;HRun=9;HaplotypeScore=53.9774;InbreedingCoeff=0.9225;MQ=67.00;MQ0=0;MQRankSum=-1.317;QD=25.58;ReadPosRankSum=-0.077;VQSLOD=5.4024;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:0,0:20:25.01:0,25,78	1/1:0,9:9:27.07:299,27,0	0/0:14,0:13:3.60:0,4,153	0/0:13,0:12:25.01:0,25,192	1/1:5,23:28:17.12:645,17,0	0/0:29,0:29:68.96:0,69,595	0/0:15,0:15:44.99:0,45,391	1/1:4,19:23:54.11:578,54,0	0/0:23,0:23:59.98:0,60,521	1/1:6,17:23:51.14:563,51,0	1/1:4,9:13:30.07:324,30,0	0/0:19,0:18:50.97:0,51,439	0/0:19,0:19:50.95:0,51,436	0/0:19,0:19:53.98:0,54,468	1/1:4,12:16:36.10:398,36,0	1/1:1,13:14:39.07:419,39,0	1/1:3,17:20:2.05:479,2,0	1/1:2,9:11:4.04:273,4,0	1/1:3,11:13:33.06:350,33,0	1/1:2,25:27:52.12:790,52,0	1/1:3,8:11:21.06:232,21,0	0/0:18,0:18:47.98:0,48,417	0/0:20,0:20:53.96:0,54,464	0/0:28,1:29:44.79:0,45,618	1/1:0,22:22:54.15:597,54,0	1/1:3,10:13:30.08:332,30,0	1/1:6,21:26:37.08:625,37,0	1/1:0,4:4:12.03:133,12,0
chr10	80469865	.	AGTGTGTGTGTGT	A	1811.73	PASS	AB=0.851;AC=25;AF=0.568;AN=44;BaseQRankSum=3.114;DP=427;FS=1.110;HRun=0;HaplotypeScore=142.5569;InbreedingCoeff=0.3452;MQ=53.99;MQ0=26;MQRankSum=-3.579;QD=9.64;ReadPosRankSum=2.944;VQSLOD=2.6889;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:19:8.22:0,8,106	1/1:4,0:5:6.02:146,6,0	./.	./.	1/1:10,1:11:6.01:99,6,0	1/1:11,0:14:3.01:88,3,0	0/0:13,1:14:1.82:0,2,5	./.	1/1:7,0:8:6.02:169,6,0	1/1:13,0:14:2.07:63,2,0	1/1:11,0:11:3.01:32,3,0	0/0:15,0:13:24.05:0,24,957	./.	./.	1/1:16,0:18:12:270,12,0	0/1:12,1:15:23.33:138,0,23	0/0:8,0:7:3.01:0,3,44	1/1:10,0:10:5.02:103,5,0	0/1:19,0:19:18.94:69,0,19	1/1:12,2:15:2.52:66,3,0	./.	0/0:13,0:13:18.52:0,19,734	0/0:13,0:12:12.04:0,12,625	0/0:27,0:27:42.14:0,42,1885	0/0:13,2:17:0.47:0,0,1	1/1:20,0:19:1.02:54,1,0	0/1:12,4:16:27.14:462,0,27	1/1:2,2:2:6.02:199,6,0
chr10	80471217	.	TG	T	17598.56	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=7.908;DP=729;FS=2.861;HRun=5;HaplotypeScore=84.8285;InbreedingCoeff=0.9894;MQ=74.99;MQ0=0;MQRankSum=-3.095;QD=31.26;ReadPosRankSum=3.017;VQSLOD=5.5145;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,54:57:99:1769,156,0	1/1:1,12:13:36.10:408,36,0	0/0:25,0:24:62.58:0,63,725	0/0:22,0:22:50.67:0,51,626	1/1:1,27:28:81.23:918,81,0	1/1:2,23:24:66.19:749,66,0	1/1:1,25:26:66.19:749,66,0	1/1:0,28:28:81.20:900,81,0	0/0:18,0:18:54.18:0,54,738	1/1:0,30:30:90.25:1015,90,0	1/1:1,27:28:78.22:885,78,0	0/0:22,0:22:66.22:0,66,903	1/1:0,26:26:72.21:816,72,0	1/1:1,23:24:63.18:714,63,0	1/1:2,24:26:69.20:783,69,0	1/1:0,27:27:78.22:885,78,0	1/1:1,33:34:96.27:1089,96,0	1/1:1,22:23:63.18:714,63,0	1/1:0,12:12:33.09:374,33,0	1/1:2,32:34:90.26:1021,90,0	1/1:0,31:31:93.27:1054,93,0	0/0:25,0:25:69.20:0,69,903	0/0:30,0:30:87.27:0,87,1161	0/0:24,0:24:69.23:0,69,943	1/1:2,21:23:63.18:715,63,0	1/1:1,24:25:72.20:816,72,0	1/1:1,34:35:99:1123,99,0	1/1:0,8:7:9.03:102,9,0
chr10	80472789	.	T	TCACCA	38906.59	PASS	AC=40;AF=0.741;AN=54;BaseQRankSum=-13.319;DP=708;FS=5.362;HRun=0;HaplotypeScore=119.8635;InbreedingCoeff=0.9997;MQ=72.50;MQ0=0;MQRankSum=-11.070;QD=76.44;ReadPosRankSum=3.076;VQSLOD=6.9706;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,36:45:99:3099,102,0	1/1:2,10:12:33.11:988,33,0	0/0:26,0:25:60.21:0,60,1240	0/0:33,0:33:90.28:0,90,1819	1/1:4,15:19:39.13:1232,39,0	1/1:5,17:23:54.14:1578,54,0	1/1:4,19:26:66.23:1913,66,0	1/1:7,21:33:87.26:2487,87,0	0/0:21,0:21:60.19:0,60,1261	1/1:3,22:28:84.25:2504,84,0	1/1:2,12:15:33.11:1046,33,0	0/0:25,0:25:75.24:0,75,1589	1/1:4,29:34:90.27:2715,90,0	1/1:7,23:33:87.25:2555,87,0	1/1:2,23:26:69.19:2112,69,0	1/1:3,26:32:81.15:2488,81,0	1/1:1,21:23:54.19:1712,54,0	1/1:1,10:10:27.09:848,27,0	1/1:4,11:15:42.14:1245,42,0	1/1:3,16:19:48.12:1442,48,0	1/1:4,19:23:44.28:1423,44,0	0/0:33,0:33:99:0,99,2132	0/0:22,0:22:63.22:0,63,1335	0/0:39,0:39:99:0,108,2304	1/1:3,23:25:63.17:1916,63,0	1/1:8,20:29:84.29:2596,84,0	1/1:8,29:37:96.33:3007,96,0	./.
chr10	80473771	.	C	CTA	14476.56	PASS	AB=0.545;AC=41;AF=0.732;AN=56;BaseQRankSum=-10.101;DP=513;FS=1.566;HRun=0;HaplotypeScore=62.0852;InbreedingCoeff=0.8536;MQ=70.87;MQ0=4;MQRankSum=-0.709;QD=34.39;ReadPosRankSum=2.170;VQSLOD=6.6375;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:45.15:759,45,0	1/1:1,3:4:6.02:101,6,0	0/0:8,0:8:19.61:0,20,219	0/0:9,0:10:15.03:0,15,168	1/1:2,30:31:66.23:1113,66,0	1/1:4,16:20:45.15:759,45,0	1/1:2,6:8:3.01:51,3,0	1/1:12,29:41:87.30:1426,87,0	0/0:14,0:14:39.11:0,39,486	1/1:9,25:34:78.27:1298,78,0	1/1:3,19:22:48.16:800,48,0	0/0:16,0:16:42.11:0,42,513	1/1:2,1:16:27.01:240,27,0	1/1:4,0:14:24.01:214,24,0	1/1:5,10:14:18.06:303,18,0	1/1:1,14:15:42.14:709,42,0	0/1:2,10:12:43.57:422,0,44	1/1:1,8:10:21.06:330,21,0	1/1:4,15:18:42.14:700,42,0	1/1:4,27:31:63.22:1063,63,0	1/1:1,10:11:27.09:456,27,0	0/0:8,0:8:15.05:0,15,192	0/0:25,0:25:63.13:0,63,755	0/0:11,0:11:27.09:0,27,347	1/1:5,14:19:39.13:658,39,0	1/1:3,29:32:84.26:1354,84,0	1/1:3,27:30:75.26:1265,75,0	1/1:2,13:14:27.09:455,27,0
chr10	80475200	.	G	GACAC	7001.06	PASS	AB=0.682;AC=37;AF=0.661;AN=56;BaseQRankSum=10.638;DP=693;FS=7.352;HRun=0;HaplotypeScore=164.3872;InbreedingCoeff=0.4445;MQ=61.71;MQ0=5;MQRankSum=-1.754;QD=12.80;ReadPosRankSum=1.497;VQSLOD=3.6141;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:32:6.59:156,0,7	1/1:2,0:5:5.49:25,5,0	0/0:40,0:32:27.28:0,27,395	0/1:32,0:26:3.35:3,0,445	1/1:4,0:27:5.63:213,6,0	1/1:10,17:28:12.36:1359,12,0	1/1:6,13:20:24.08:532,24,0	0/1:26,0:51:24.84:291,0,25	0/0:17,0:17:30.10:0,30,498	1/1:8,0:30:11.62:274,12,0	1/1:3,0:20:46.44:218,46,0	0/0:24,0:24:60.18:0,60,940	1/1:9,17:30:41.88:972,42,0	1/1:11,18:29:45.15:1100,45,0	0/1:12,0:39:99:201,0,103	1/1:3,0:24:52.15:236,52,0	0/1:14,0:21:23.26:69,0,23	0/1:5,0:14:22.15:118,0,22	1/1:7,0:14:22.01:100,22,0	1/1:3,1:20:44.23:261,44,0	1/1:5,0:28:46.71:212,47,0	0/0:18,0:18:33.11:0,33,548	0/0:20,0:20:45.15:0,45,748	0/0:25,0:25:57.19:0,57,951	1/1:4,0:17:30.19:137,30,0	1/1:9,0:28:52.90:274,53,0	0/1:4,0:26:38.98:188,0,39	1/1:3,0:8:13.78:62,14,0
chr10	80476497	.	C	CT	666.55	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.999;DP=497;FS=0.818;HRun=7;HaplotypeScore=44.0792;InbreedingCoeff=0.7155;MQ=68.38;MQ0=0;MQRankSum=-0.073;QD=25.64;ReadPosRankSum=-1.085;VQSLOD=3.4690;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:63.19:761,63,0	0/0:7,0:7:15.02:0,15,145	0/0:6,0:6:2.81:0,3,28	0/0:4,0:4:3:0,3,28	0/0:28,1:29:50.85:0,51,756	0/0:11,0:11:21.03:0,21,203	0/0:8,0:8:24.04:0,24,232	0/0:24,0:24:66.10:0,66,634	0/0:19,0:19:51.08:0,51,492	0/0:24,0:24:69.11:0,69,666	0/0:27,0:27:78.11:0,78,747	0/0:15,0:15:45.07:0,45,434	0/0:29,0:29:87.14:0,87,840	0/0:12,0:12:36.06:0,36,348	0/0:21,0:21:57.09:0,57,550	0/0:20,0:20:57.09:0,57,550	0/0:18,0:18:45.06:0,45,434	0/0:9,0:9:18.03:0,18,174	0/0:19,0:19:51.08:0,51,493	0/0:22,0:22:57.09:0,57,550	0/0:18,0:18:48.06:0,48,457	0/0:9,0:9:21.03:0,21,203	0/0:21,0:20:57.07:0,57,544	0/0:19,0:19:48.08:0,48,464	0/0:20,0:20:54.08:0,54,522	0/0:25,0:25:69.11:0,69,666	0/0:21,0:21:60.08:0,60,574	0/0:14,0:14:39.06:0,39,377
chr10	80478873	.	GTT	G	6723.37	PASS	AB=0.583;AC=41;AF=0.732;AN=56;BaseQRankSum=4.649;DP=556;FS=9.186;HRun=13;HaplotypeScore=109.6855;InbreedingCoeff=0.8929;MQ=64.20;MQ0=2;MQRankSum=0.559;QD=15.86;ReadPosRankSum=4.327;VQSLOD=3.2907;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:36:47.49:254,47,0	1/1:3,5:9:14.38:124,14,0	0/0:25,0:15:25.93:0,26,238	0/0:22,0:12:12.23:0,12,92	1/1:7,14:25:52.91:453,53,0	1/1:1,0:14:32.77:141,33,0	1/1:7,0:23:35.02:149,35,0	1/1:12,18:30:32.76:458,33,0	0/0:9,0:18:45.71:0,46,419	1/1:7,20:27:37.16:573,37,0	1/1:4,13:17:32.96:320,33,0	0/0:13,0:13:30.06:0,30,411	1/1:3,16:21:41.58:381,42,0	1/1:4,19:23:51.03:495,51,0	1/1:2,18:20:22.71:411,23,0	1/1:5,11:16:12.81:253,13,0	1/1:6,15:23:38.49:344,38,0	1/1:4,17:21:39.05:378,39,0	1/1:7,12:20:23:268,23,0	1/1:4,21:25:50.92:493,51,0	1/1:3,12:15:20.04:304,20,0	0/0:9,0:11:33.04:0,33,404	0/0:22,0:22:49.68:0,50,634	0/0:18,0:20:51.16:0,51,706	1/1:4,8:14:23.12:197,23,0	1/1:7,8:17:20.63:236,21,0	1/1:2,13:19:44.02:368,44,0	0/1:2,5:7:25.21:125,0,25
chr10	80478885	.	TTA	T	689.91	PASS	AB=0.991;AC=22;AF=0.393;AN=56;BaseQRankSum=7.714;DP=524;FS=15.925;HRun=0;HaplotypeScore=115.5219;InbreedingCoeff=-0.3555;MQ=59.66;MQ0=2;MQRankSum=0.924;QD=1.86;ReadPosRankSum=6.310;VQSLOD=0.1318;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:47.88:0,48,201	1/1:6,0:6:2.64:11,3,0	0/0:23,0:12:28.54:0,29,293	0/1:18,1:9:16.51:17,0,74	0/1:22,0:22:45.35:45,0,58	0/0:15,0:15:32.40:0,32,130	0/0:22,0:22:24.29:0,24,155	0/1:25,0:25:21.49:21,0,131	0/1:20,0:20:28.17:28,0,421	0/1:24,2:26:54.94:96,0,55	0/1:15,0:15:26.30:26,0,38	0/0:12,0:12:33.07:0,33,477	0/1:23,1:24:80.07:98,0,80	0/1:22,0:22:33.49:55,0,33	0/1:21,0:21:14.07:76,0,14	0/1:16,0:15:18.28:18,0,34	1/1:17,0:17:12.44:69,12,0	0/1:22,0:22:46.03:46,0,66	0/1:18,0:17:11.83:25,0,12	0/1:23,0:23:54.03:71,0,54	0/1:17,0:17:40.07:40,0,64	0/0:13,0:13:36.07:0,36,507	0/0:18,0:18:45.49:0,45,625	0/0:20,0:20:56.78:0,57,807	0/1:12,0:12:38.08:40,0,38	0/1:13,0:13:29.39:29,0,67	0/1:20,0:20:27.31:37,0,27	0/1:12,0:12:1.90:2,0,101
chr10	80480466	.	CACACATATAT	C	2178.27	PASS	AB=0.957;AC=16;AF=0.333;AN=48;BaseQRankSum=4.387;DP=310;FS=0.811;HRun=0;HaplotypeScore=111.6563;InbreedingCoeff=-0.0095;MQ=48.57;MQ0=8;MQRankSum=-1.443;QD=11.35;ReadPosRankSum=-0.616;VQSLOD=2.3340;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:4:0.47:0,0,1	0/1:5,0:4:39.89:57,0,40	./.	./.	0/0:25,0:25:6.02:0,6,77	./.	./.	0/1:18,0:17:3.09:432,0,3	0/0:3,0:2:3.01:0,3,109	0/1:6,8:13:37.78:314,0,38	0/1:17,0:17:13.26:118,0,13	0/0:11,0:11:11.99:0,12,489	0/0:14,0:14:11.96:0,12,131	0/0:12,0:12:5.96:0,6,69	0/0:9,0:9:0:0,0,0	0/1:7,0:7:27.80:53,0,28	0/1:18,0:17:35.72:171,0,36	0/1:13,0:13:7.14:85,0,7	1/1:10,0:9:10.50:221,11,0	0/1:30,0:30:41.08:74,0,41	1/1:10,0:10:18.05:289,18,0	0/0:4,0:4:3.01:0,3,50	0/0:7,0:7:9.03:0,9,244	0/0:11,0:11:25:0,25,876	0/0:12,0:12:0:0,0,0	1/1:16,0:16:32.86:449,33,0	0/1:19,0:19:24.71:25,0,46	0/1:13,0:12:33.73:37,0,34
chr10	80480468	.	CACATATAT	C	3171.57	PASS	AB=0.769;AC=24;AF=0.500;AN=48;BaseQRankSum=3.025;DP=304;FS=1.985;HRun=0;HaplotypeScore=100.9128;InbreedingCoeff=0.3904;MQ=49.14;MQ0=8;MQRankSum=-1.560;QD=15.62;ReadPosRankSum=-0.207;VQSLOD=2.6961;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:4:0.47:0,0,1	0/1:5,0:4:15.96:57,0,16	./.	./.	0/0:3,21:24:5.35:0,5,30	0/0:1,0:1:3.01:0,3,72	./.	1/1:21,0:20:35.87:534,36,0	0/0:4,0:3:6.02:0,6,141	1/1:14,1:13:21.14:432,21,0	1/1:16,2:17:12.75:201,13,0	0/0:10,0:10:11.88:0,12,433	0/1:14,0:14:11.80:12,0,34	0/0:12,0:12:3.93:0,4,24	0/0:0,9:9:0:0,0,0	1/1:8,0:8:12:203,12,0	1/1:18,0:17:4.01:317,4,0	1/1:12,0:12:20.08:203,20,0	1/1:9,1:9:24.07:389,24,0	1/1:3,23:28:2.81:64,3,0	1/1:8,0:8:17.98:246,18,0	0/0:4,0:4:3:0,3,25	0/0:7,0:7:9.02:0,9,153	0/0:11,0:11:1.05:0,1,662	./.	1/1:0,15:16:42:624,42,0	0/1:2,15:18:10.27:10,0,14	0/1:2,10:11:13.85:37,0,14
chr10	80480470	.	CATATAT	C	2259.56	PASS	AB=1.000;AC=29;AF=0.630;AN=46;BaseQRankSum=3.792;DP=299;FS=6.435;HRun=0;HaplotypeScore=97.9652;InbreedingCoeff=0.5609;MQ=49.17;MQ0=9;MQRankSum=-2.326;QD=10.04;ReadPosRankSum=-1.546;VQSLOD=1.1775;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,0:4:3.01:63,3,0	./.	./.	0/1:24,0:24:0:0,0,1	0/0:1,0:1:3.01:0,3,72	./.	1/1:9,12:21:35.99:536,36,0	0/0:3,0:3:6.02:0,6,124	1/1:15,0:13:24.84:260,25,0	1/1:17,0:17:12.06:163,12,0	0/0:10,0:10:11.65:0,12,360	1/1:4,10:14:3.01:41,3,0	0/0:4,7:11:0.47:0,0,1	0/0:9,0:9:0:0,0,1	1/1:4,4:8:6.02:89,6,0	1/1:9,0:16:12.02:203,12,0	1/1:11,0:11:5.21:65,5,0	1/1:8,1:9:20.18:267,20,0	1/1:26,0:27:2.84:46,3,0	1/1:8,0:8:9.03:179,9,0	./.	0/0:7,0:7:6:0,6,72	0/0:10,0:10:18.05:0,18,492	0/0:11,0:11:0:0,0,0	1/1:16,0:16:29.31:429,29,0	1/1:18,0:17:2.66:15,3,0	1/1:12,0:11:3.01:43,3,0
chr10	80481426	.	AT	A	1358.12	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.385;DP=652;FS=8.834;HRun=2;HaplotypeScore=94.1791;InbreedingCoeff=0.9482;MQ=82.45;MQ0=0;MQRankSum=-1.356;QD=32.34;ReadPosRankSum=-0.063;VQSLOD=2.5825;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.14:0,57,808	0/0:11,0:11:33.11:0,33,495	0/0:14,0:14:42.13:0,42,567	0/0:22,0:22:56.86:0,57,784	0/0:30,0:30:87.29:0,87,1304	1/1:1,28:29:75.24:973,75,0	1/1:0,13:13:39.13:506,39,0	0/0:37,0:37:99:0,105,1539	0/0:27,0:27:81.23:0,81,1190	0/0:27,0:27:81.27:0,81,1198	0/0:28,0:28:84.27:0,84,1239	0/0:22,0:22:63.21:0,63,944	0/0:27,0:27:81.26:0,81,1191	0/0:18,0:18:54.18:0,54,806	0/0:31,0:31:90.30:0,90,1331	0/0:21,0:21:60.20:0,60,899	0/0:15,0:15:45.15:0,45,662	0/0:2,0:2:6.02:0,6,90	0/0:18,0:18:51.17:0,51,764	0/0:47,0:47:99:0,141,2091	0/0:25,0:25:72.23:0,72,1057	0/0:29,0:29:87.27:0,87,1255	0/0:19,0:19:57.18:0,57,836	0/0:12,0:12:33.10:0,33,476	0/0:28,0:28:81.27:0,81,1213	0/0:31,0:31:90.30:0,90,1349	0/0:37,0:37:99:0,108,1571	0/0:12,0:12:36.11:0,36,514
chr10	80482590	.	CCTTGT	C	286.95	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.469;DP=536;FS=0.000;HRun=0;HaplotypeScore=100.9960;InbreedingCoeff=0.9827;MQ=73.59;MQ0=3;MQRankSum=-1.741;QD=35.87;ReadPosRankSum=-0.148;VQSLOD=3.3481;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,6:8:18.06:377,18,0	0/0:9,0:9:24.08:0,24,744	0/0:18,0:18:46.68:0,47,1096	0/0:20,0:20:27.76:0,28,1491	0/0:23,0:23:69.24:0,69,2060	0/0:24,0:24:66.21:0,66,1954	0/0:12,0:12:33.11:0,33,925	0/0:36,0:36:96.33:0,96,2873	0/0:14,0:14:39.13:0,39,1164	0/0:35,0:35:93.32:0,93,2866	0/0:21,0:20:54.17:0,54,1572	0/0:15,0:15:45.15:0,45,1370	0/0:30,0:29:84.27:0,84,2481	0/0:15,0:15:42.14:0,42,1301	0/0:20,0:20:57.20:0,57,1766	0/0:27,0:27:60.19:0,60,1748	0/0:8,0:8:21.07:0,21,651	0/0:9,0:9:27.09:0,27,836	0/0:14,0:14:42.14:0,42,1224	0/0:16,0:16:42.14:0,42,1283	0/0:15,0:15:30.10:0,30,908	0/0:16,0:16:48.14:0,48,1352	0/0:16,0:16:48.16:0,48,1332	0/0:12,0:12:33.11:0,33,956	0/0:27,0:26:75.26:0,75,2271	0/0:31,0:31:93.32:0,93,2783	0/0:30,0:29:66.21:0,66,1881	0/0:15,0:13:33.11:0,33,1023
chr10	80482664	.	TCA	T	3475.80	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=3.967;DP=503;FS=24.413;HRun=0;HaplotypeScore=109.6614;InbreedingCoeff=0.7544;MQ=66.91;MQ0=29;MQRankSum=-2.182;QD=10.10;ReadPosRankSum=0.287;VQSLOD=1.0766;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,6:8:17.93:173,18,0	0/0:6,0:5:5.06:0,5,16	0/0:19,0:13:8.51:0,9,212	0/0:32,0:22:43.10:0,43,498	1/1:17,0:16:5.04:35,5,0	1/1:19,0:18:41.95:291,42,0	1/1:15,1:14:32.65:252,33,0	1/1:42,0:38:89.61:745,90,0	0/0:14,0:14:23.72:0,24,367	1/1:25,0:24:40.24:304,40,0	1/1:19,0:16:33.06:227,33,0	0/0:19,0:19:38.73:0,39,585	1/1:19,0:16:30.43:233,30,0	1/1:19,0:16:17.32:119,17,0	1/1:16,0:15:13.15:166,13,0	0/1:21,0:20:13.96:15,0,14	1/1:13,0:12:11.86:82,12,0	1/1:5,0:4:1.69:33,2,0	1/1:11,0:9:13.11:85,13,0	1/1:16,0:11:13:112,13,0	1/1:16,0:15:5.99:50,6,0	0/0:17,0:16:43.57:0,44,638	0/0:21,0:21:49.18:0,49,610	0/0:23,0:23:37.17:0,37,680	1/1:20,0:16:24.27:243,24,0	1/1:18,0:16:22.67:297,23,0	0/1:21,0:16:0.31:13,0,0	0/0:8,0:4:4.26:0,4,13
chr10	80482668	.	A	ACTCTCTCTCTCTT	10590.32	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=-1.324;DP=490;FS=26.994;HRun=0;HaplotypeScore=163.3566;InbreedingCoeff=0.6118;MQ=65.14;MQ0=31;MQRankSum=-4.645;QD=30.79;ReadPosRankSum=-1.990;VQSLOD=2.3768;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:11:37.21:37,0,155	1/1:4,1:4:12.04:536,12,0	0/0:18,0:12:15.35:0,15,296	0/0:30,0:20:56.99:0,57,1041	1/1:3,0:15:11.97:360,12,0	0/1:18,0:17:99:108,0,440	0/1:17,0:15:99:143,0,213	1/1:40,0:36:99:1450,99,0	0/0:14,0:14:39.07:0,39,958	1/1:22,0:21:54.16:1041,54,0	1/1:16,1:14:36.02:554,36,0	0/0:18,0:18:48.15:0,48,1518	1/1:19,0:16:42.10:874,42,0	1/1:19,0:16:29.55:556,30,0	1/1:12,1:12:30.07:561,30,0	1/1:19,1:19:11.80:508,12,0	1/1:14,0:13:13.38:298,13,0	0/1:5,0:4:52.09:52,0,54	1/1:12,0:9:23.86:343,24,0	1/1:12,3:10:30.03:818,30,0	1/1:5,4:13:6.49:81,6,0	0/0:19,0:18:51.15:0,51,1497	0/0:22,0:22:60.18:0,60,1757	0/0:25,0:25:63.18:0,63,2029	1/1:18,1:15:42.10:778,42,0	1/1:3,7:15:45.06:897,45,0	1/1:6,10:14:5.95:211,6,0	1/1:5,2:4:6.02:383,6,0
chr10	80482669	.	C	CTCTCTCTCTCT	9444.37	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=1.453;DP=473;FS=25.581;HRun=0;HaplotypeScore=154.6073;InbreedingCoeff=0.6144;MQ=62.70;MQ0=31;MQRankSum=-5.499;QD=28.53;ReadPosRankSum=-1.199;VQSLOD=2.6978;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:11:38.14:38,0,154	1/1:5,1:5:12.04:539,12,0	0/0:15,0:9:14.84:0,15,285	0/0:30,0:20:56.99:0,57,931	1/1:13,0:12:8.98:275,9,0	0/1:19,0:18:99:109,0,374	0/1:17,0:15:99:139,0,193	1/1:41,0:37:99:1464,102,0	0/0:14,0:14:39.10:0,39,906	1/1:23,0:22:54.16:1052,54,0	1/1:17,2:16:35.39:441,35,0	0/0:18,0:18:48.15:0,48,1384	1/1:19,0:16:42.03:812,42,0	1/1:18,0:15:28.64:425,29,0	1/1:12,0:11:29.86:437,30,0	1/1:3,15:19:11.87:522,12,0	1/1:14,0:13:14.25:231,14,0	0/1:5,0:4:41.49:51,0,41	1/1:12,0:9:23.91:353,24,0	1/1:15,1:11:29.84:687,30,0	1/1:7,0:6:6.49:81,6,0	0/0:19,0:18:51.15:0,51,1357	0/0:22,0:22:63.18:0,63,1570	0/0:24,0:24:66.19:0,66,1882	1/1:18,1:15:41.76:641,42,0	1/1:11,0:9:27.07:671,27,0	1/1:17,0:12:5.95:164,6,0	1/1:9,0:4:8.96:311,9,0
chr10	80482679	.	C	CT	3649.54	PASS	AB=0.835;AC=21;AF=0.375;AN=56;BaseQRankSum=8.507;DP=572;FS=1.279;HRun=1;HaplotypeScore=137.0386;InbreedingCoeff=-0.4544;MQ=50.58;MQ0=32;MQRankSum=-3.656;QD=9.08;ReadPosRankSum=2.467;VQSLOD=1.4011;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,1:11:12.01:47,0,12	0/1:9,1:9:91.47:91,0,127	0/0:11,0:4:8.96:0,9,84	0/0:31,0:15:36.11:0,36,434	0/1:25,1:24:61.08:92,0,61	1/1:19,0:18:35.83:193,36,0	0/1:17,1:16:36.86:116,0,37	0/1:14,27:37:93.57:886,0,94	0/0:15,0:15:39.02:0,39,479	0/1:12,17:28:99:448,0,385	0/1:18,5:20:99:243,0,115	0/0:18,0:18:48.02:0,48,568	0/1:15,4:16:99:195,0,99	0/1:12,9:18:12.57:64,0,13	0/1:18,4:21:99:181,0,103	0/1:24,0:23:67.48:67,0,77	0/1:6,10:15:40.02:62,0,40	0/1:6,2:7:25.10:25,0,138	0/1:9,7:13:99:247,0,118	0/1:22,4:21:99:211,0,105	0/1:10,0:9:29.49:70,0,29	0/0:21,0:20:54.11:0,54,637	0/0:25,0:25:71.91:0,72,833	0/0:26,0:26:68.82:0,69,805	0/1:22,6:24:99:194,0,111	0/1:16,1:14:99:207,0,154	0/0:21,2:18:2.24:0,2,176	0/1:14,1:10:9:9,0,215
chr10	80482680	.	TC	T	3573.89	PASS	AB=0.900;AC=21;AF=0.375;AN=56;BaseQRankSum=5.767;DP=567;FS=0.401;HRun=1;HaplotypeScore=135.0533;InbreedingCoeff=-0.3017;MQ=50.37;MQ0=32;MQRankSum=-1.393;QD=9.28;ReadPosRankSum=0.094;VQSLOD=0.9411;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,3:11:15.50:117,15,0	0/1:10,0:9:21.34:21,0,200	0/0:11,0:3:8.96:0,9,84	0/0:30,0:14:36.10:0,36,431	0/1:26,0:24:57.39:57,0,72	1/1:3,15:17:45.15:617,45,0	0/1:7,11:16:17.15:329,0,17	0/1:39,0:36:99:736,0,219	0/0:14,0:14:37.94:0,38,530	0/1:29,0:28:99:260,0,472	0/1:17,5:19:99:224,0,143	0/0:18,0:18:46.95:0,47,653	0/1:14,5:16:99:185,0,144	0/1:22,0:19:42.59:61,0,43	0/1:19,3:21:99:149,0,133	0/1:23,2:24:18.75:19,0,134	0/1:16,0:15:45.51:46,0,61	0/1:8,0:7:25.10:25,0,161	0/1:14,2:13:99:182,0,145	0/1:20,6:21:99:137,0,163	0/1:7,3:9:29.60:70,0,30	0/0:20,0:19:54.36:0,54,741	0/0:25,0:25:68.91:0,69,910	0/0:26,0:26:67.73:0,68,946	0/1:23,5:24:99:162,0,139	0/1:16,1:14:99:176,0,208	0/0:20,3:18:17.73:0,18,238	0/0:14,1:10:22.72:0,23,323
chr10	80482708	.	TCA	T	110.85	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.203;DP=559;FS=5.065;HRun=0;HaplotypeScore=173.2601;InbreedingCoeff=0.8677;MQ=47.04;MQ0=6;MQRankSum=-2.226;QD=10.08;ReadPosRankSum=1.539;VQSLOD=2.8384;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,7:9:16.97:201,17,0	0/0:10,0:10:24.07:0,24,379	0/0:25,0:9:21.69:0,22,330	0/0:27,0:7:9.03:0,9,145	0/0:22,0:22:25.68:0,26,423	0/0:18,0:18:26.17:0,26,676	0/0:18,0:18:27.79:0,28,355	0/0:28,0:27:59.76:0,60,800	0/0:14,0:14:39.13:0,39,644	0/0:31,0:31:61.96:0,62,930	0/0:22,0:22:32.35:0,32,541	0/0:17,0:17:45.15:0,45,754	0/0:22,0:22:47.32:0,47,709	0/0:20,0:20:29.57:0,30,459	0/0:26,0:26:48.16:0,48,770	0/0:21,0:20:51.10:0,51,756	0/0:15,0:15:24:0,24,357	0/0:9,0:9:17.96:0,18,223	0/0:13,0:13:30.07:0,30,442	0/0:29,0:29:47.61:0,48,676	0/0:9,0:9:8.99:0,9,134	0/0:20,0:19:32:0,32,568	0/0:21,0:21:30.87:0,31,873	0/0:31,0:31:78.25:0,78,1231	0/0:32,0:32:54.18:0,54,888	0/0:14,0:14:35.39:0,35,608	0/0:20,0:19:48:0,48,657	0/0:12,0:12:33.11:0,33,506
chr10	80482732	.	ACACC	A	11502.41	PASS	AB=0.833;AC=40;AF=0.714;AN=56;BaseQRankSum=4.293;DP=601;FS=3.792;HRun=0;HaplotypeScore=138.5863;InbreedingCoeff=0.7507;MQ=47.58;MQ0=16;MQRankSum=0.615;QD=28.05;ReadPosRankSum=0.586;VQSLOD=4.8364;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,1:11:10.49:180,10,0	1/1:8,3:11:21:327,21,0	0/0:48,0:12:25.97:0,26,308	0/0:39,0:9:10.05:0,10,138	1/1:10,10:20:27.55:458,28,0	1/1:16,0:16:29.30:272,29,0	0/1:14,0:14:68.67:103,0,69	1/1:23,9:31:69.09:890,69,0	0/0:16,0:16:43.01:0,43,948	1/1:10,12:21:51.13:827,51,0	1/1:12,10:22:39.80:659,40,0	0/0:18,0:18:46.86:0,47,895	1/1:5,17:22:39.77:645,40,0	1/1:11,6:17:33.89:544,34,0	1/1:2,22:24:47.78:822,48,0	0/1:11,11:22:35.77:657,0,36	1/1:11,5:16:26.92:374,27,0	1/1:2,9:11:0.21:251,0,0	1/1:13,5:16:43.57:536,44,0	1/1:16,12:28:51.63:872,52,0	1/1:9,6:14:21.04:299,21,0	0/0:16,0:15:31.05:0,31,643	0/0:22,0:22:6.22:0,6,862	0/0:32,0:32:79.86:0,80,1557	1/1:5,27:32:51.17:914,51,0	1/1:12,8:19:47.99:710,48,0	1/1:16,8:23:54.06:779,54,0	1/1:4,5:9:22.74:381,23,0
chr10	80482734	.	ACC	A	2608.56	PASS	AB=0.982;AC=30;AF=0.536;AN=56;BaseQRankSum=6.584;DP=595;FS=10.128;HRun=3;HaplotypeScore=145.7747;InbreedingCoeff=0.4333;MQ=47.89;MQ0=17;MQRankSum=4.941;QD=6.90;ReadPosRankSum=2.827;VQSLOD=-0.3074;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:11:8.94:70,9,0	0/1:11,0:11:49.29:66,0,49	0/0:46,0:12:36.07:0,36,577	0/0:39,0:9:20.54:0,21,271	1/1:21,1:22:17.81:148,18,0	0/0:16,0:16:26.61:0,27,98	0/0:14,0:14:19.65:0,20,150	0/1:34,1:34:99:200,0,123	0/0:15,0:15:45.14:0,45,793	1/1:25,0:24:39.39:269,39,0	1/1:20,0:20:35.39:186,35,0	0/0:17,0:17:51.15:0,51,879	1/1:21,0:21:15.95:141,16,0	0/1:15,1:16:2.49:134,0,2	1/1:24,0:24:29:197,29,0	0/1:22,0:22:17.92:148,0,18	0/1:15,1:16:27.46:72,0,27	0/1:11,0:11:51.76:52,0,52	0/1:18,0:16:47.15:101,0,47	1/1:25,0:25:48.15:256,48,0	1/1:15,0:14:18.35:118,18,0	0/0:16,0:15:41.81:0,42,627	0/0:22,0:22:31.98:0,32,839	0/0:31,0:31:84.27:0,84,1464	1/1:31,0:31:48.28:244,48,0	0/1:19,0:18:17.73:142,0,18	1/1:23,0:22:11.42:166,11,0	1/1:9,0:9:16.48:103,16,0
chr10	80482736	.	CCACCCA	C	1861.58	PASS	AB=0.963;AC=27;AF=0.482;AN=56;BaseQRankSum=8.728;DP=597;FS=0.824;HRun=0;HaplotypeScore=178.8601;InbreedingCoeff=0.2159;MQ=49.32;MQ0=18;MQRankSum=-2.001;QD=4.95;ReadPosRankSum=4.897;VQSLOD=2.5081;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:9:8.55:54,9,0	1/1:11,0:11:9.29:36,9,0	0/0:47,0:12:25.98:0,26,397	0/0:37,0:10:13.39:0,13,192	0/1:20,1:21:18.92:44,0,19	0/0:17,0:17:3.55:0,4,15	0/0:14,0:14:17.57:0,18,127	0/1:34,2:35:59.32:375,0,59	0/0:15,0:15:43.03:0,43,1349	0/1:21,1:21:21.10:121,0,21	1/1:19,0:19:11.89:48,12,0	0/0:17,0:17:46.91:0,47,1275	1/1:20,1:21:27.95:160,28,0	0/1:15,0:15:2.91:24,0,3	1/1:24,0:24:29.89:94,30,0	0/1:22,0:22:37.39:37,0,116	0/1:16,1:16:33.51:93,0,34	0/1:10,0:10:15.36:15,0,31	0/1:19,1:18:59.03:212,0,59	0/1:26,0:26:29.60:40,0,30	0/1:15,0:14:2.69:3,0,38	0/0:15,0:14:31.09:0,31,874	0/0:25,0:25:15.32:0,15,1349	0/0:32,0:32:86.07:0,86,2277	1/1:29,2:31:34.87:114,35,0	1/1:18,1:18:19.41:150,19,0	1/1:20,3:22:19.04:287,19,0	0/1:8,2:10:43.23:145,0,43
chr10	80482738	.	ACC	A	3530.24	PASS	AB=0.989;AC=29;AF=0.518;AN=56;BaseQRankSum=8.267;DP=597;FS=2.137;HRun=3;HaplotypeScore=138.9270;InbreedingCoeff=0.3725;MQ=49.54;MQ0=18;MQRankSum=1.609;QD=9.27;ReadPosRankSum=6.423;VQSLOD=0.4072;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:9:32.24:32,0,33	1/1:11,0:11:20.20:113,20,0	0/0:46,1:11:25.46:0,25,273	0/0:38,0:11:9.60:0,10,141	0/1:21,1:22:26.93:132,0,27	0/0:16,0:16:22.44:0,22,86	0/0:15,0:15:36.06:0,36,261	0/1:36,0:35:25.53:326,0,26	0/0:15,0:15:43.03:0,43,777	0/1:26,0:24:13.77:224,0,14	1/1:20,0:20:14.77:206,15,0	0/0:17,0:17:36.81:0,37,700	1/1:22,0:22:16.08:207,16,0	1/1:13,1:14:16.93:148,17,0	1/1:22,2:24:46.79:291,47,0	0/1:22,0:22:33.52:185,0,34	0/1:15,1:15:4.88:129,0,5	1/1:10,0:10:17.08:97,17,0	0/1:21,0:19:49.21:210,0,49	1/1:25,0:25:10.72:226,11,0	0/1:15,0:14:2.40:63,0,2	0/0:12,0:11:13.29:0,13,460	0/0:23,0:23:5.19:0,5,781	0/0:33,0:33:66.97:0,67,1313	1/1:30,1:31:49.99:305,50,0	1/1:20,0:19:22.38:240,22,0	1/1:23,0:22:37.47:271,37,0	0/1:10,0:10:6.66:124,0,7
chr10	80482739	.	CCCA	C	2205.05	PASS	AB=0.998;AC=26;AF=0.464;AN=56;BaseQRankSum=12.370;DP=597;FS=7.151;HRun=0;HaplotypeScore=148.8963;InbreedingCoeff=-0.0813;MQ=49.77;MQ0=18;MQRankSum=1.011;QD=5.34;ReadPosRankSum=8.828;VQSLOD=1.0368;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,4:9:11.85:92,12,0	0/1:10,0:10:0.44:56,0,0	0/0:48,0:12:21.02:0,21,404	0/0:37,0:10:24.03:0,24,300	0/1:21,0:21:50.03:85,0,50	1/1:15,0:15:29.10:125,29,0	0/1:15,0:15:21.45:21,0,124	0/1:37,0:36:99:105,0,183	0/0:15,0:15:45.15:0,45,1006	0/1:26,1:25:99:151,0,142	0/1:20,0:20:14.46:129,0,14	0/0:16,0:16:47.37:0,47,936	0/1:22,0:22:18.73:145,0,19	1/1:14,0:14:11.88:115,12,0	1/1:24,0:24:26.60:200,27,0	0/1:21,0:21:62.95:150,0,63	0/1:16,0:15:58.65:59,0,67	0/1:10,0:10:22.10:57,0,22	0/1:22,0:20:55.02:55,0,200	0/1:25,0:25:1.63:172,0,2	0/1:15,0:14:10.60:37,0,11	0/0:12,0:11:33.11:0,33,673	0/0:23,0:23:62.16:0,62,1094	0/0:33,0:33:85.46:0,85,1689	1/1:30,0:30:47.04:249,47,0	0/1:20,0:19:86.07:126,0,86	0/1:26,0:25:97.92:159,0,98	0/1:10,0:10:42.90:97,0,43
chr10	80482740	.	CCA	C	1254.63	PASS	AB=0.995;AC=28;AF=0.500;AN=56;BaseQRankSum=13.151;DP=600;FS=0.845;HRun=0;HaplotypeScore=144.2828;InbreedingCoeff=-0.1929;MQ=49.83;MQ0=18;MQRankSum=-2.544;QD=2.70;ReadPosRankSum=6.504;VQSLOD=2.1079;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:9:10.39:74,10,0	1/1:10,0:10:11.68:35,12,0	0/1:48,0:12:2.96:3,0,88	0/0:37,0:10:11.40:0,11,132	0/1:22,0:22:34.22:34,0,83	1/1:15,0:16:32.73:168,33,0	0/1:15,0:15:4.59:42,0,5	0/1:36,1:36:71.15:71,0,216	0/0:15,0:15:42.11:0,42,633	0/1:27,0:25:71.02:71,0,137	0/1:20,0:20:19.37:58,0,19	0/0:16,1:17:2.46:0,2,524	0/1:22,0:22:11.31:74,0,11	0/1:15,0:15:23.21:43,0,23	1/1:24,0:24:35.38:120,35,0	0/1:21,0:21:49.47:67,0,49	0/1:15,1:15:40.93:58,0,41	1/1:10,0:10:2.76:28,3,0	0/1:22,0:20:43.89:44,0,148	0/1:25,0:25:23.73:74,0,24	0/1:15,0:14:12.01:12,0,28	0/0:12,0:11:24.08:0,24,389	0/0:22,1:23:8.49:0,8,630	0/0:30,2:32:1.90:0,2,1000	1/1:30,0:30:43.36:153,43,0	0/1:20,0:19:58.13:60,0,58	0/1:26,0:25:81.23:81,0,112	0/1:10,0:10:25.70:52,0,26
chr10	80482741	.	CACA	C	449.29	PASS	AB=0.929;AC=6;AF=0.107;AN=56;BaseQRankSum=4.212;DP=602;FS=2.927;HRun=0;HaplotypeScore=157.9147;InbreedingCoeff=0.2697;MQ=50.06;MQ0=18;MQRankSum=-4.387;QD=5.69;ReadPosRankSum=0.894;VQSLOD=3.0249;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:9:10.98:11,0,36	0/0:10,0:10:16.47:0,16,69	0/0:44,0:11:26.20:0,26,389	0/0:36,0:10:24.04:0,24,347	0/0:22,0:22:31.33:0,31,268	1/1:6,10:16:35.56:361,36,0	0/1:9,6:15:11.36:179,0,11	0/0:38,0:37:43.48:0,43,745	0/0:16,0:16:48.15:0,48,1071	0/0:27,0:25:34.92:0,35,489	0/0:21,0:21:35.89:0,36,213	0/0:17,0:17:50.84:0,51,1027	0/0:22,0:22:9.62:0,10,135	0/0:15,0:15:20.81:0,21,126	0/0:24,0:24:30.03:0,30,116	0/0:22,0:22:35.17:0,35,259	0/0:16,0:15:18.73:0,19,178	0/0:10,0:10:12.78:0,13,86	0/0:22,0:20:35.72:0,36,491	0/0:26,0:26:40.19:0,40,256	0/0:15,0:14:17.48:0,17,120	0/0:12,0:11:33.10:0,33,698	0/0:24,0:24:65.86:0,66,1248	0/0:32,0:32:86.37:0,86,1821	0/0:30,0:30:39.69:0,40,139	0/0:20,0:19:27.78:0,28,315	0/1:25,0:24:11.70:12,0,287	0/1:10,0:10:13.89:14,0,123
chr10	80485682	.	TTCTCTCTCTCCC	T	4927.44	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-3.104;DP=450;FS=0.000;HRun=0;HaplotypeScore=141.0781;InbreedingCoeff=0.4959;MQ=73.65;MQ0=12;MQRankSum=-0.678;QD=15.89;ReadPosRankSum=1.311;VQSLOD=2.9892;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:24:8.56:169,0,9	1/1:7,0:7:20.94:170,21,0	0/0:21,0:12:10.88:0,11,149	0/0:38,0:18:4.58:0,5,218	1/1:11,0:11:12.47:163,12,0	1/1:29,0:29:65.65:537,66,0	1/1:13,1:14:26.93:220,27,0	1/1:37,0:37:48.87:609,49,0	0/0:21,0:21:42.04:0,42,529	1/1:13,0:11:27.01:251,27,0	1/1:8,0:8:11.99:100,12,0	0/0:15,0:15:35.65:0,36,548	0/1:10,0:10:38.30:152,0,38	0/1:13,0:13:80.77:81,0,184	1/1:13,0:16:30.54:341,31,0	1/1:4,19:22:13.86:345,14,0	1/1:10,0:10:1.89:147,2,0	0/1:8,0:8:1.36:83,0,1	1/1:2,0:7:14.22:172,14,0	1/1:8,0:8:1.01:110,1,0	1/1:13,0:13:7.58:201,8,0	0/0:14,0:14:21.03:0,21,355	0/0:9,0:9:20.12:0,20,188	0/0:22,0:22:32.86:0,33,538	1/1:19,0:19:35.99:309,36,0	1/1:17,0:17:42.04:389,42,0	1/1:14,0:13:0.88:311,1,0	0/1:7,0:7:31.18:68,0,31
chr10	80485693	.	CCTCT	C	217.98	PASS	AB=0.917;AC=14;AF=0.318;AN=44;BaseQRankSum=1.770;DP=455;FS=16.693;HRun=0;HaplotypeScore=96.8851;InbreedingCoeff=0.2867;MQ=62.00;MQ0=33;MQRankSum=0.076;QD=1.61;ReadPosRankSum=2.406;VQSLOD=0.7573;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:0:0,0,0	0/0:8,0:8:3:0,3,25	0/0:16,0:7:0:0,0,0	./.	0/0:11,0:10:3.01:0,3,36	0/0:31,0:31:3.53:0,4,45	0/0:14,0:13:3.92:0,4,39	0/0:28,0:26:2.13:0,2,5	1/1:16,6:22:2.75:45,3,0	./.	./.	1/1:14,4:17:3.01:46,3,0	0/0:14,0:13:3.28:0,3,65	0/0:14,0:14:3.47:0,3,33	0/0:18,0:16:0.24:0,0,1	1/1:22,0:21:2.45:46,2,0	0/0:12,0:11:1.25:0,1,3	./.	1/1:7,0:6:2.28:26,2,0	./.	0/0:14,0:14:0.47:0,0,1	1/1:14,4:17:3.01:47,3,0	0/1:8,2:10:0.06:0,0,0	1/1:14,7:20:6.02:93,6,0	./.	0/0:16,0:16:3.06:0,3,8	0/1:17,0:13:24.60:25,0,30	0/0:9,0:6:2.22:0,2,7
chr10	80487896	.	GGTTTT	G	11670.63	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=0.959;DP=455;FS=0.000;HRun=0;HaplotypeScore=94.4111;InbreedingCoeff=0.9588;MQ=65.85;MQ0=1;MQRankSum=-3.444;QD=41.39;ReadPosRankSum=4.371;VQSLOD=4.7466;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.10:0,54,736	1/1:2,5:8:17.69:342,18,0	0/0:19,0:7:7.78:0,8,254	0/0:12,0:9:23.95:0,24,387	1/1:3,13:19:47.16:932,47,0	0/0:18,0:18:44.59:0,45,376	0/0:11,0:11:20.99:0,21,181	1/1:1,17:18:41.07:608,41,0	0/0:14,0:14:39.13:0,39,1185	1/1:0,27:27:81.16:1421,81,0	1/1:0,22:23:49.06:958,49,0	0/0:13,0:13:18.06:0,18,533	0/0:20,0:20:54.10:0,54,913	0/0:17,0:17:39.09:0,39,712	1/1:0,0:15:23.52:214,24,0	1/1:0,15:16:25.63:596,26,0	1/1:6,14:20:50.90:856,51,0	1/1:0,18:19:27.02:571,27,0	1/1:0,24:24:68.99:1154,69,0	1/1:0,23:26:71.99:1367,72,0	1/1:0,4:4:3.01:68,3,0	0/0:10,0:10:30.09:0,30,697	0/0:12,0:12:34.62:0,35,741	0/0:7,0:7:18.04:0,18,412	1/1:0,15:16:27.06:579,27,0	1/1:6,13:19:57.07:996,57,0	1/1:0,19:19:26.95:604,27,0	1/1:0,9:9:18.06:404,18,0
chr10	80487897	.	GTT	G	2724.35	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=8.615;DP=454;FS=1.192;HRun=15;HaplotypeScore=103.6551;InbreedingCoeff=0.8475;MQ=66.82;MQ0=1;MQRankSum=-4.358;QD=7.02;ReadPosRankSum=6.939;VQSLOD=0.6218;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,16:20:38.92:343,39,0	1/1:8,0:8:13.90:65,14,0	0/1:21,0:8:1.63:2,0,115	0/0:10,0:9:11.90:0,12,85	1/1:19,0:19:37.60:170,38,0	1/1:2,0:18:36.27:153,36,0	1/1:1,0:10:13.70:59,14,0	1/1:18,0:18:21.30:92,21,0	0/0:12,0:14:39.07:0,39,502	1/1:27,0:27:41.90:206,42,0	1/1:23,0:23:38.81:179,39,0	0/0:5,0:13:18.05:0,18,226	1/1:11,9:20:2.10:179,2,0	1/1:9,7:17:11.36:91,11,0	1/1:15,0:15:22.16:102,22,0	1/1:16,0:16:25.05:115,25,0	1/1:20,0:20:30.59:136,31,0	1/1:19,0:19:25.14:118,25,0	1/1:24,0:24:34.29:165,34,0	1/1:26,0:26:58.45:271,58,0	1/1:4,0:4:2.80:13,3,0	0/0:7,0:10:26.04:0,26,270	0/0:10,0:10:23.74:0,24,276	0/0:7,0:7:14.58:0,15,188	1/1:16,0:16:24.13:109,24,0	1/1:19,0:19:34.35:152,34,0	1/1:19,0:19:25.11:116,25,0	1/1:9,0:9:16.79:78,17,0
chr10	80488005	.	ATTTG	A	12255.19	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=13.406;DP=519;FS=14.333;HRun=0;HaplotypeScore=92.0895;InbreedingCoeff=0.9896;MQ=71.80;MQ0=0;MQRankSum=-3.577;QD=38.91;ReadPosRankSum=2.825;VQSLOD=4.0056;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.22:0,78,1857	1/1:2,7:9:24.08:419,24,0	0/0:15,0:15:30.48:0,30,582	0/0:11,0:11:27.07:0,27,579	1/1:2,32:34:84.29:1488,84,0	0/0:17,0:17:45.15:0,45,1160	0/0:10,0:10:27.09:0,27,697	1/1:4,8:12:24.06:395,24,0	0/0:13,0:13:33.11:0,33,852	1/1:3,18:21:54.14:900,54,0	1/1:7,23:30:66.23:1173,66,0	0/0:20,0:20:54.17:0,54,1339	0/0:20,0:20:60.18:0,60,1445	0/0:24,0:24:63.20:0,63,1523	1/1:4,16:20:42.14:748,42,0	1/1:0,17:17:39.13:691,39,0	1/1:3,9:12:27.09:478,27,0	1/1:1,14:15:24.08:427,24,0	1/1:2,17:19:51.17:880,51,0	1/1:4,31:35:81.28:1438,81,0	1/1:3,10:13:21.07:374,21,0	0/0:8,0:8:24.08:0,24,584	0/0:19,0:19:54.19:0,54,1393	0/0:18,0:18:45.15:0,45,1161	1/1:0,14:14:33.11:587,33,0	1/1:1,24:25:69.23:1192,69,0	1/1:3,27:30:51.17:906,51,0	1/1:7,2:9:9.03:159,9,0
chr10	80489795	.	G	GT	2844.03	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=1.866;DP=515;FS=2.061;HRun=6;HaplotypeScore=66.4429;InbreedingCoeff=0.9868;MQ=78.75;MQ0=0;MQRankSum=-2.389;QD=30.91;ReadPosRankSum=2.444;VQSLOD=4.4189;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:42.13:528,42,0	0/0:11,0:11:33.07:0,33,336	0/0:16,0:16:36:0,36,343	0/0:12,0:12:9.80:0,10,205	0/0:35,0:35:90.20:0,90,918	1/1:0,21:20:60.19:755,60,0	1/1:2,13:15:36.12:453,36,0	0/0:36,0:36:96.21:0,96,979	0/0:12,0:12:30.06:0,30,304	0/0:29,0:29:84.19:0,84,853	0/0:15,0:15:39.07:0,39,392	0/0:14,0:14:33.06:0,33,337	1/1:3,21:24:60.19:755,60,0	1/1:0,15:15:42.13:528,42,0	0/0:23,0:23:66.15:0,66,673	0/0:13,0:13:36.08:0,36,367	0/0:8,0:8:21.03:0,21,207	0/0:14,0:14:39.09:0,39,398	0/0:16,0:16:39.08:0,39,398	0/0:24,0:24:69.14:0,69,697	0/0:13,0:13:32.98:0,33,304	0/0:12,0:12:30.06:0,30,306	0/0:11,0:11:30.06:0,30,306	0/0:11,0:11:32.95:0,33,312	0/0:23,0:23:63.61:0,64,644	0/0:26,0:26:75.17:0,75,765	0/0:35,0:35:99:0,102,1035	0/0:14,0:14:33.07:0,33,336
chr10	80494732	.	ACT	A	15700.47	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=15.624;DP=639;FS=6.520;HRun=0;HaplotypeScore=78.2967;InbreedingCoeff=0.9909;MQ=79.15;MQ0=0;MQRankSum=-0.687;QD=44.23;ReadPosRankSum=2.806;VQSLOD=6.4438;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.20:0,57,1158	1/1:0,5:5:15.05:245,15,0	0/0:13,0:13:36.12:0,36,685	0/0:17,0:17:22.91:0,23,776	1/1:0,35:35:87.30:1419,87,0	0/0:31,0:31:93.32:0,93,1889	0/0:21,0:21:63.22:0,63,1268	1/1:0,27:27:81.27:1299,81,0	0/0:31,0:31:93.30:0,93,1852	1/1:0,30:30:90.29:1431,90,0	1/1:0,19:19:54.18:881,54,0	0/0:27,0:27:81.26:0,81,1597	0/0:30,0:30:90.31:0,90,1787	0/0:33,0:33:99:0,99,1947	1/1:0,31:31:69.23:1111,69,0	1/1:0,26:26:75.26:1223,75,0	1/1:0,23:23:57.19:930,57,0	1/1:0,4:4:12.04:195,12,0	1/1:0,17:17:51.16:809,51,0	1/1:0,34:34:96.33:1561,96,0	1/1:0,16:16:45.15:734,45,0	0/0:22,0:22:66.20:0,66,1291	0/0:20,0:20:60.21:0,60,1219	0/0:20,0:20:60.21:0,60,1219	1/1:0,24:24:60.20:979,60,0	1/1:0,26:26:75.26:1219,75,0	1/1:0,33:33:87.30:1419,87,0	1/1:0,5:5:15.05:245,15,0
chr10	80494985	.	G	GT	15400.10	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-16.173;DP=586;FS=8.399;HRun=2;HaplotypeScore=52.9413;InbreedingCoeff=0.9950;MQ=82.53;MQ0=0;MQRankSum=-3.766;QD=38.31;ReadPosRankSum=2.556;VQSLOD=5.2027;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:27.08:0,27,323	1/1:0,14:14:42.14:605,42,0	0/0:14,0:14:39.09:0,39,450	0/0:17,0:17:47.81:0,48,550	1/1:0,30:30:87.29:1253,87,0	1/1:0,24:24:69.23:994,69,0	1/1:3,11:14:27.09:389,27,0	1/1:3,28:31:84.27:1193,84,0	0/0:22,0:22:66.21:0,66,818	1/1:2,20:22:60.17:822,60,0	1/1:1,19:20:42.14:605,42,0	0/0:14,0:14:42.13:0,42,520	0/0:30,0:30:84.19:0,84,967	0/0:19,0:19:51.10:0,51,585	1/1:0,22:22:60.20:864,60,0	1/1:2,21:23:63.21:907,63,0	1/1:1,23:24:66.18:927,66,0	1/1:1,9:10:30.09:415,30,0	1/1:2,26:28:81.24:1125,81,0	1/1:1,34:35:99:1356,99,0	1/1:0,19:19:48.16:691,48,0	0/0:23,0:23:69.20:0,69,843	0/0:18,0:18:54.16:0,54,657	0/0:18,0:18:54.17:0,54,669	1/1:1,26:27:75.25:1076,75,0	1/1:2,25:27:75.23:1056,75,0	1/1:2,26:28:66.22:950,66,0	1/1:0,4:4:12.04:173,12,0
chr10	80495525	.	AT	A	5657.87	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=7.478;DP=440;FS=1.760;HRun=8;HaplotypeScore=76.7368;InbreedingCoeff=0.9948;MQ=71.78;MQ0=0;MQRankSum=-2.719;QD=23.38;ReadPosRankSum=1.184;VQSLOD=5.5317;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,1:30:55.28:0,55,934	1/1:1,19:20:48.07:463,48,0	0/0:15,0:14:28.58:0,29,287	0/0:18,0:15:17.83:0,18,160	1/1:4,16:20:45.02:425,45,0	0/0:17,0:17:45.14:0,45,543	0/0:14,0:14:27.08:0,27,326	1/1:2,20:22:57.09:550,57,0	0/0:14,0:14:30.09:0,30,362	1/1:2,17:19:51.08:492,51,0	1/1:1,19:20:51:480,51,0	0/0:15,0:15:36.11:0,36,435	0/0:17,0:17:42.13:0,42,506	0/0:11,0:11:33.09:0,33,385	1/1:2,11:13:27.04:261,27,0	1/1:3,10:13:20.98:192,21,0	1/1:0,10:10:27.04:261,27,0	1/1:0,5:5:15.02:145,15,0	1/1:1,13:14:36.05:343,36,0	1/1:2,16:18:45.02:434,45,0	1/1:1,9:10:24.04:232,24,0	0/0:14,0:14:42.10:0,42,477	0/0:19,0:19:48.14:0,48,569	0/0:14,0:14:30.09:0,30,362	1/1:3,17:20:48.08:463,48,0	1/1:2,11:13:33:309,33,0	1/1:3,12:15:36.05:347,36,0	1/1:0,10:10:27.04:261,27,0
chr10	80495548	.	A	AGTGTGT	2909.41	PASS	AB=1.000;AC=33;AF=0.635;AN=52;BaseQRankSum=2.839;DP=493;FS=4.701;HRun=0;HaplotypeScore=148.5789;InbreedingCoeff=0.5800;MQ=53.99;MQ0=8;MQRankSum=-4.631;QD=9.06;ReadPosRankSum=-2.035;VQSLOD=2.2964;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:6.07:0,6,412	1/1:15,1:16:17.59:197,18,0	./.	0/1:21,0:12:0:0,0,0	1/1:24,1:25:17.63:299,18,0	1/1:17,0:17:2.99:24,3,0	1/1:14,0:14:3.48:59,3,0	1/1:32,0:32:25.94:300,26,0	0/1:15,0:14:27.87:28,0,305	1/1:23,0:23:30.02:628,30,0	1/1:16,2:19:6:77,6,0	0/0:12,0:12:16.60:0,17,225	0/0:13,0:13:6.02:0,6,112	0/0:13,0:14:15.05:0,15,258	0/0:18,1:19:0.89:0,1,2	1/1:10,1:12:2.82:24,3,0	1/1:7,0:9:9.03:159,9,0	0/1:5,0:5:4.23:86,0,4	1/1:16,0:14:11.93:268,12,0	1/1:17,5:22:5.26:115,5,0	1/1:11,0:11:5.90:42,6,0	0/0:17,0:17:22.87:0,23,355	0/0:20,0:20:10.46:0,10,343	0/0:15,0:14:14.99:0,15,223	1/1:21,0:21:5.53:95,6,0	1/1:22,0:22:32.09:517,32,0	1/1:20,0:20:9.50:164,10,0	./.
chr10	80495608	.	AGT	A	1431.25	PASS	AB=0.911;AC=31;AF=0.574;AN=54;BaseQRankSum=8.463;DP=509;FS=1.072;HRun=0;HaplotypeScore=102.7641;InbreedingCoeff=0.5982;MQ=67.74;MQ0=31;MQRankSum=-7.675;QD=4.97;ReadPosRankSum=-4.872;VQSLOD=1.2404;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:36.19:0,36,889	1/1:3,2:5:6.41:42,6,0	0/0:54,0:16:15.59:0,16,154	0/1:96,0:36:40.20:40,0,241	1/1:11,7:18:3:25,3,0	0/1:16,0:16:15.06:15,0,52	0/0:7,0:7:2.89:0,3,56	1/1:9,2:8:23.90:214,24,0	0/0:14,0:14:37.44:0,37,505	1/1:7,4:11:29.84:283,30,0	./.	0/0:11,1:12:4.88:0,5,340	0/0:10,0:10:6.45:0,6,308	0/0:18,0:18:15.88:0,16,698	1/1:8,14:22:2.47:45,2,0	1/1:6,4:9:2.53:27,3,0	1/1:4,2:6:10.17:92,10,0	1/1:2,1:3:2.96:19,3,0	1/1:6,2:6:17.97:183,18,0	1/1:13,9:21:7.46:23,7,0	1/1:4,1:5:2.95:18,3,0	0/0:16,0:16:38.09:0,38,563	0/0:21,0:21:52.87:0,53,795	0/0:24,0:22:56.94:0,57,808	0/1:14,8:21:0:0,0,0	1/1:10,5:14:35.92:391,36,0	1/1:7,6:13:16.41:127,16,0	1/1:3,2:5:11.78:74,12,0
chr10	80495629	.	GAC	G	246.95	PASS	AB=0.995;AC=17;AF=0.340;AN=50;BaseQRankSum=10.099;DP=604;FS=16.599;HRun=0;HaplotypeScore=138.2777;InbreedingCoeff=0.1723;MQ=75.40;MQ0=18;MQRankSum=-4.902;QD=0.83;ReadPosRankSum=-3.919;VQSLOD=0.0625;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:66.19:0,66,1164	0/0:3,0:3:0.88:0,1,2	0/0:81,0:40:15.28:0,15,441	0/1:137,0:54:7.21:7,0,463	./.	0/1:19,0:18:5.32:5,0,32	0/1:10,0:10:5.03:24,0,5	0/1:16,0:15:45.81:71,0,46	0/0:14,0:13:31.82:0,32,472	0/1:9,0:9:4.53:34,0,5	./.	0/0:12,0:12:1.96:0,2,407	0/0:15,0:15:23.07:0,23,519	0/0:19,0:19:48.13:0,48,880	0/1:20,1:21:0.02:0,0,0	1/1:15,0:14:4.97:21,5,0	0/0:6,0:5:5.73:0,6,34	1/1:3,0:3:2.90:16,3,0	0/1:11,0:10:23.69:63,0,24	1/1:20,1:20:4.35:26,4,0	0/0:5,0:5:0.47:0,0,1	0/0:15,0:15:39.13:0,39,751	0/0:18,0:18:40.13:0,40,778	0/0:30,0:29:77.93:0,78,1448	./.	0/1:17,0:17:33.43:60,0,33	0/1:14,0:14:7.01:35,0,7	1/1:4,0:4:4.95:27,5,0
chr10	80495631	.	CAG	C	1070.27	PASS	AB=0.806;AC=27;AF=0.540;AN=50;BaseQRankSum=10.001;DP=603;FS=3.379;HRun=0;HaplotypeScore=135.7563;InbreedingCoeff=0.6475;MQ=75.32;MQ0=19;MQRankSum=-7.083;QD=3.60;ReadPosRankSum=-2.196;VQSLOD=1.9453;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:32:63.17:0,63,971	1/1:0,3:3:2.92:17,3,0	0/0:84,0:41:37.85:0,38,534	0/1:138,0:54:19.54:20,0,330	./.	0/0:4,0:17:5.01:0,5,27	1/1:4,0:11:5.65:20,6,0	1/1:4,11:14:3.05:209,3,0	0/0:12,0:11:27.09:0,27,435	1/1:1,8:9:23.86:202,24,0	./.	0/0:13,0:13:8.23:0,8,386	0/0:15,0:15:36.01:0,36,515	0/0:19,0:19:48.15:0,48,779	0/1:10,12:22:0.02:0,0,0	1/1:4,11:14:5.81:56,6,0	0/1:5,2:6:0:0,0,0	1/1:3,0:3:2.37:8,2,0	1/1:4,7:10:10.06:175,10,0	1/1:6,15:20:0.78:5,1,0	1/1:2,3:5:2.86:24,3,0	0/0:13,0:13:39.13:0,39,651	0/0:19,0:19:42.60:0,43,678	0/0:29,0:28:75.26:0,75,1257	./.	1/1:5,12:17:36.23:282,36,0	1/1:5,9:14:17.79:146,18,0	1/1:2,2:4:8.98:78,9,0
chr10	80495642	.	AGCGT	A	3113.02	PASS	AB=0.983;AC=29;AF=0.558;AN=52;BaseQRankSum=9.636;DP=604;FS=8.252;HRun=0;HaplotypeScore=143.2473;InbreedingCoeff=0.6582;MQ=73.87;MQ0=24;MQRankSum=-9.099;QD=9.32;ReadPosRankSum=-1.440;VQSLOD=2.4380;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:54.17:0,54,1396	1/1:4,0:4:3.01:48,3,0	0/0:94,0:45:35:0,35,810	0/1:140,0:55:27.52:28,0,432	./.	1/1:18,0:17:5.39:31,5,0	1/1:11,0:11:11.44:116,11,0	1/1:18,0:17:39.02:553,39,0	0/0:10,0:9:27.09:0,27,698	1/1:9,0:9:27.09:482,27,0	./.	0/0:14,0:14:32.99:0,33,690	0/0:17,0:17:39.60:0,40,915	0/0:18,0:18:51.15:0,51,1335	0/1:17,1:18:0.28:0,0,0	1/1:15,0:14:7.49:132,7,0	1/1:6,0:5:3.01:35,3,0	1/1:2,1:3:5.98:79,6,0	0/1:13,0:11:36.56:407,0,37	1/1:21,0:20:11.94:104,12,0	0/1:5,0:5:0:0,0,0	0/0:16,0:16:48.16:0,48,1176	0/0:18,0:18:38.59:0,39,1103	0/0:28,0:28:81.23:0,81,2058	0/1:15,0:15:0:0,0,0	1/1:15,0:15:42.12:719,42,0	1/1:11,1:12:18.03:317,18,0	1/1:6,0:6:18.01:245,18,0
chr10	80495644	.	CGT	C	2113.71	PASS	AB=0.667;AC=28;AF=0.560;AN=50;BaseQRankSum=10.278;DP=603;FS=4.405;HRun=0;HaplotypeScore=136.7003;InbreedingCoeff=0.6600;MQ=73.28;MQ0=24;MQRankSum=-8.314;QD=6.46;ReadPosRankSum=-0.433;VQSLOD=3.0901;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:53.83:0,54,928	1/1:0,4:4:2.99:24,3,0	0/0:93,0:46:43.10:0,43,745	0/1:134,1:54:27.07:27,0,280	./.	1/1:3,15:17:1.74:26,2,0	1/1:2,9:11:11.52:129,12,0	1/1:1,16:16:39.12:494,39,0	0/0:10,0:9:27.09:0,27,472	1/1:0,9:9:27.02:283,27,0	./.	0/0:15,0:15:35.73:0,36,497	0/0:16,0:16:36.32:0,36,655	0/0:20,0:20:57.15:0,57,940	0/1:5,13:18:0.05:0,0,0	1/1:1,14:14:7.85:101,8,0	1/1:4,2:5:2.96:19,3,0	1/1:2,1:3:5.93:53,6,0	0/1:5,9:12:11.61:319,0,12	1/1:8,14:21:8.98:70,9,0	./.	0/0:16,0:16:48.14:0,48,831	0/0:18,0:18:39.62:0,40,791	0/0:27,0:27:78.26:0,78,1425	0/1:1,14:15:0:0,0,0	1/1:1,14:15:42.03:413,42,0	1/1:2,10:12:17.90:159,18,0	1/1:1,5:6:17.95:179,18,0
chr10	80495653	.	GAC	G	1058.72	PASS	AB=0.997;AC=26;AF=0.500;AN=52;BaseQRankSum=8.407;DP=666;FS=11.401;HRun=0;HaplotypeScore=153.7224;InbreedingCoeff=0.6745;MQ=69.12;MQ0=26;MQRankSum=-6.674;QD=3.18;ReadPosRankSum=-0.629;VQSLOD=2.0905;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:51.09:0,51,784	1/1:4,0:4:2.37:8,2,0	0/0:106,0:48:51.32:0,51,592	0/1:144,1:50:15.08:15,0,250	./.	0/0:23,0:22:5.92:0,6,55	0/0:14,0:14:6.93:0,7,85	1/1:22,0:22:30.69:216,31,0	0/0:10,0:9:18.02:0,18,397	1/1:9,0:9:21.49:141,21,0	./.	0/0:13,0:13:12.37:0,12,433	0/0:16,0:16:28.86:0,29,594	0/0:20,0:20:59.99:0,60,965	1/1:22,0:22:2.64:13,3,0	1/1:16,1:16:8.73:64,9,0	1/1:7,0:6:2.99:24,3,0	1/1:5,0:5:8.85:57,9,0	0/1:17,0:13:72.30:123,0,72	1/1:20,1:21:11.50:77,11,0	0/0:6,0:6:0:0,0,0	0/0:15,0:15:45:0,45,772	0/0:20,0:20:41.72:0,42,745	0/0:31,0:31:81.31:0,81,1322	1/1:21,0:21:8.43:40,8,0	1/1:17,0:17:32.75:205,33,0	1/1:18,0:18:20.67:144,21,0	1/1:7,1:8:15.58:120,16,0
chr10	80495655	.	CAG	C	2379.88	PASS	AB=0.812;AC=25;AF=0.463;AN=54;BaseQRankSum=5.466;DP=676;FS=3.763;HRun=0;HaplotypeScore=153.1351;InbreedingCoeff=0.6768;MQ=68.77;MQ0=26;MQRankSum=-6.726;QD=11.61;ReadPosRankSum=-1.779;VQSLOD=3.3836;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:36.10:0,36,560	1/1:1,4:5:5.99:49,6,0	0/0:108,0:49:27.21:0,27,402	0/0:149,0:53:17.41:0,17,266	./.	0/0:23,0:22:11.92:0,12,113	0/0:14,0:14:18.25:0,18,194	1/1:11,13:24:45.13:544,45,0	0/0:9,0:8:21.03:0,21,313	1/1:1,8:9:24.07:290,24,0	0/0:5,5:11:2.98:0,3,21	0/1:12,1:13:7.80:8,0,374	0/0:16,0:16:21.37:0,21,523	0/0:20,0:20:54.13:0,54,824	1/1:10,13:23:5.84:61,6,0	1/1:6,11:16:8.83:112,9,0	0/1:5,2:6:11.96:29,0,12	1/1:4,1:5:8.50:73,9,0	0/1:12,7:15:14.36:288,0,14	1/1:10,9:19:15.25:115,15,0	0/0:2,4:6:0:0,0,0	0/0:16,0:16:45.12:0,45,680	0/0:20,0:20:42.60:0,43,664	0/0:30,0:30:72.17:0,72,1111	1/1:11,10:21:8.94:112,9,0	1/1:6,11:17:36.10:425,36,0	1/1:4,14:18:21.03:251,21,0	1/1:4,4:8:20.87:223,21,0
chr10	80495691	.	CAG	C	1120.96	PASS	AB=0.943;AC=17;AF=0.315;AN=54;BaseQRankSum=0.091;DP=732;FS=4.997;HRun=0;HaplotypeScore=173.2458;InbreedingCoeff=0.3319;MQ=59.66;MQ0=30;MQRankSum=2.346;QD=2.52;ReadPosRankSum=2.271;VQSLOD=2.5389;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,11:21:17.95:217,18,0	0/0:6,0:6:3.01:0,3,48	0/1:106,0:31:2.44:2,0,58	0/1:133,0:39:9.37:9,0,43	0/0:25,2:27:11.84:0,12,193	1/1:19,0:18:8.71:108,9,0	1/1:30,0:30:14:178,14,0	0/1:39,1:38:12.11:12,0,797	0/0:7,0:6:12.01:0,12,145	0/1:18,1:18:12.63:13,0,273	0/0:15,0:15:8.83:0,9,144	0/1:15,1:17:13:13,0,486	1/1:2,13:15:30.09:361,30,0	1/1:7,10:17:26.93:325,27,0	0/0:19,0:19:11.77:0,12,192	0/0:24,0:24:23.86:0,24,354	0/0:10,0:9:6.30:0,6,96	0/0:7,0:7:6.02:0,6,96	0/0:18,1:16:5.77:0,6,454	0/0:24,0:23:26.50:0,27,370	./.	0/0:22,1:23:14.64:0,15,627	0/0:22,2:24:15:0,15,684	0/0:32,0:32:69.08:0,69,996	0/0:14,2:16:12.02:0,12,192	0/1:12,2:13:35.69:36,0,375	0/0:20,1:21:18.29:0,18,387	0/1:10,1:11:21.16:21,0,149
chr10	80495719	.	GAGAC	G	2438.80	PASS	AB=0.997;AC=41;AF=0.759;AN=54;BaseQRankSum=8.387;DP=660;FS=25.015;HRun=0;HaplotypeScore=174.7411;InbreedingCoeff=0.4616;MQ=59.15;MQ0=31;MQRankSum=-2.830;QD=4.58;ReadPosRankSum=-0.010;VQSLOD=1.0780;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,18:27:17.86:147,18,0	1/1:6,0:6:8.88:63,9,0	0/1:73,0:20:7.32:7,0,91	0/1:119,0:34:3.79:4,0,85	1/1:21,0:20:11.95:97,12,0	0/1:14,0:14:30.40:48,0,30	0/1:28,0:28:1.80:13,0,2	1/1:27,0:26:35.89:292,36,0	1/1:13,0:12:3.99:109,4,0	1/1:19,0:17:29.46:222,29,0	1/1:9,0:9:5.83:50,6,0	0/0:27,0:27:56.53:0,57,993	1/1:13,2:15:20.82:204,21,0	1/1:12,9:21:29.93:298,30,0	1/1:17,0:17:8.88:73,9,0	1/1:21,0:21:20.25:180,20,0	0/1:7,0:7:6.92:59,0,7	1/1:5,0:5:11.85:79,12,0	1/1:8,0:8:8.94:68,9,0	1/1:23,0:23:14.71:116,15,0	./.	0/0:23,0:23:63.04:0,63,986	0/0:27,0:27:61.04:0,61,740	0/0:25,0:25:3.90:0,4,357	1/1:13,0:13:5.60:50,6,0	1/1:14,0:13:28.69:228,29,0	1/1:23,0:23:17.57:116,18,0	1/1:7,0:7:11.89:84,12,0
chr10	80495723	.	CAGACAGACAGAGAGAG	C	5949.77	PASS	AB=1.000;AC=32;AF=0.593;AN=54;BaseQRankSum=3.440;DP=635;FS=16.479;HRun=0;HaplotypeScore=225.1652;InbreedingCoeff=0.7153;MQ=58.22;MQ0=30;MQRankSum=-4.609;QD=23.61;ReadPosRankSum=-1.764;VQSLOD=2.4527;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:11.82:0,12,457	1/1:3,3:6:9.03:220,9,0	0/0:69,0:20:25.70:0,26,286	0/0:109,0:29:4.61:0,5,515	1/1:13,6:20:12.04:191,12,0	0/1:15,0:15:67.64:68,0,148	1/1:24,0:25:4.08:51,4,0	1/1:3,23:25:65.95:925,66,0	0/0:14,0:13:21.05:0,21,803	1/1:2,17:17:41.65:887,42,0	1/1:5,4:9:5.91:100,6,0	0/0:26,0:26:66.67:0,67,3411	0/0:14,0:14:13.39:0,13,502	0/0:21,0:21:13.75:0,14,585	1/1:10,5:15:9.44:148,9,0	1/1:11,9:20:27.69:828,28,0	1/1:6,1:7:14.64:199,15,0	0/1:5,0:5:55.95:110,0,56	1/1:5,1:6:12.01:241,12,0	1/1:11,10:22:6.38:303,6,0	./.	0/0:22,0:22:63.22:0,63,3451	0/0:27,0:27:69.20:0,69,2861	0/0:23,0:23:60.12:0,60,2732	1/1:6,6:12:5.40:98,5,0	1/1:9,4:13:36.07:920,36,0	1/1:5,18:23:17.18:498,17,0	1/1:7,0:7:11.87:165,12,0
chr10	80495729	.	GAC	G	2350.71	PASS	AB=0.984;AC=40;AF=0.741;AN=54;BaseQRankSum=9.588;DP=610;FS=4.844;HRun=0;HaplotypeScore=149.0882;InbreedingCoeff=0.2298;MQ=55.00;MQ0=30;MQRankSum=-3.082;QD=4.54;ReadPosRankSum=-1.975;VQSLOD=2.4976;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:43.93:123,0,44	1/1:8,0:8:17.76:123,18,0	0/1:60,0:16:14.52:15,0,90	0/1:101,0:26:9.49:9,0,82	1/1:20,0:19:11.98:97,12,0	1/1:16,0:16:11.79:86,12,0	0/1:24,0:24:10.43:12,0,10	1/1:24,0:23:44.86:364,45,0	0/0:15,0:14:15.08:0,15,60	1/1:19,0:17:32.32:225,32,0	1/1:9,0:9:5.86:50,6,0	0/0:28,0:28:49.66:0,50,876	0/1:13,0:13:49.05:128,0,49	0/1:19,2:21:1.07:197,0,1	1/1:15,1:16:11.98:97,12,0	1/1:20,0:20:23.36:158,23,0	1/1:7,0:7:9.86:65,10,0	1/1:6,0:6:11.85:79,12,0	1/1:3,0:3:8.77:54,9,0	1/1:20,0:20:15.39:118,15,0	./.	0/0:23,0:23:44.16:0,44,729	0/1:24,1:25:10.49:10,0,529	0/1:25,0:25:52.51:53,0,136	1/1:11,0:11:5.55:50,6,0	1/1:12,0:11:31.66:212,32,0	1/1:21,0:21:17.57:112,18,0	1/1:7,0:7:11.89:84,12,0
chr10	80495731	.	CAG	C	577.04	PASS	AB=0.970;AC=20;AF=0.400;AN=50;BaseQRankSum=4.861;DP=624;FS=0.754;HRun=0;HaplotypeScore=163.0035;InbreedingCoeff=0.1353;MQ=54.21;MQ0=29;MQRankSum=-3.235;QD=1.78;ReadPosRankSum=4.523;VQSLOD=1.8704;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:9:0,9,128	1/1:8,0:8:2.46:12,2,0	0/1:57,0:16:0:0,0,0	0/0:96,0:23:5.79:0,6,40	0/1:23,0:22:0:1,0,0	0/0:16,0:16:5.55:0,6,47	0/0:23,0:23:2.90:0,3,16	0/0:24,0:23:2.03:0,2,6	1/1:2,0:14:14.20:70,14,0	0/1:18,0:16:1.18:23,0,1	0/0:13,0:13:2.79:0,3,24	0/1:25,3:28:11.64:12,0,635	0/1:13,0:13:19.60:20,0,96	0/1:23,0:23:0.80:1,0,66	0/0:18,0:18:6.19:0,6,50	1/1:23,0:23:12.10:53,12,0	0/0:9,0:8:2.99:0,3,24	./.	0/1:5,0:5:5.08:5,0,37	0/0:19,0:19:2.22:0,2,16	./.	0/1:22,2:24:4.29:4,0,353	0/1:23,4:27:99:100,0,268	1/1:9,14:25:35.77:370,36,0	0/0:12,0:12:2.78:0,3,25	0/1:13,0:12:14.19:28,0,14	1/1:21,0:21:5.20:19,5,0	./.
chr10	80498707	.	GA	G	4607.89	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=3.715;DP=471;FS=6.151;HRun=11;HaplotypeScore=52.6204;InbreedingCoeff=0.9369;MQ=67.27;MQ0=0;MQRankSum=-0.523;QD=16.70;ReadPosRankSum=1.875;VQSLOD=5.6777;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:34:68.70:0,69,394	1/1:0,6:6:8.99:74,9,0	0/0:6,0:5:14.85:0,15,130	0/0:8,0:8:17.50:0,18,160	1/1:3,18:21:38.91:320,39,0	0/0:16,1:18:14.28:0,14,334	0/0:13,0:15:41.75:0,42,403	1/1:6,19:25:21.89:381,22,0	0/0:17,0:17:48.12:0,48,512	1/1:7,15:23:46.97:375,47,0	1/1:3,17:20:18.98:362,19,0	0/0:17,0:17:36.09:0,36,384	0/0:4,0:12:17.24:0,17,97	0/0:4,0:9:25.86:0,26,145	1/1:5,17:22:43.98:351,44,0	1/1:1,17:19:43.99:351,44,0	1/1:5,15:21:12:294,12,0	1/1:1,6:7:17.98:148,18,0	1/1:1,10:11:29.92:239,30,0	1/1:4,19:23:18.92:362,19,0	1/1:2,12:14:6.97:264,7,0	0/0:14,1:15:17.47:0,17,391	0/0:25,1:27:47.37:0,47,693	0/0:16,0:16:45.11:0,45,480	1/1:4,19:23:53.93:443,54,0	1/1:5,14:19:9.94:288,10,0	1/1:1,10:11:29.96:246,30,0	1/1:5,5:10:4.41:110,4,0
chr10	80499418	.	ATGT	A	227.07	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=4.959;DP=266;FS=1.128;HRun=0;HaplotypeScore=73.4907;InbreedingCoeff=0.5054;MQ=79.80;MQ0=4;MQRankSum=-5.028;QD=18.92;ReadPosRankSum=2.662;VQSLOD=3.1890;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:9.03:0,9,195	0/0:3,0:3:9.03:0,9,207	0/0:14,0:7:4.69:0,5,23	0/0:43,0:19:23.41:0,23,242	0/0:8,0:8:21.07:0,21,458	1/1:2,10:12:35.31:321,35,0	./.	0/0:36,0:36:99:0,108,2316	0/0:5,0:5:15.05:0,15,331	0/0:7,0:7:21.07:0,21,459	0/0:11,0:11:27.09:0,27,578	0/0:4,0:4:12.04:0,12,296	0/0:4,0:4:12.04:0,12,276	0/0:4,0:4:6.01:0,6,90	0/0:3,0:3:9.03:0,9,186	0/0:4,0:4:9.03:0,9,209	0/0:16,0:16:48.12:0,48,1069	0/0:6,0:6:18.06:0,18,400	0/0:10,0:9:27.09:0,27,619	0/0:8,0:8:24.06:0,24,523	0/0:2,0:2:6.02:0,6,130	0/0:4,0:4:12.04:0,12,271	0/0:5,0:5:15.05:0,15,352	0/0:1,0:1:3.01:0,3,74	0/0:11,0:11:33.11:0,33,720	0/0:10,0:10:30.10:0,30,713	0/0:15,0:15:45.15:0,45,1043	0/0:15,0:15:45.15:0,45,960
chr10	80499422	.	ATATATGTGTATATATATATATATATAT	A	2278.75	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.857;DP=268;FS=0.000;HRun=0;HaplotypeScore=177.9107;InbreedingCoeff=0.6239;MQ=75.78;MQ0=5;MQRankSum=-6.867;QD=108.51;ReadPosRankSum=1.076;VQSLOD=3.2607;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:9.03:0,9,579	0/0:3,0:3:9.03:0,9,842	0/0:16,0:7:7.46:0,7,58	0/0:41,0:17:27.38:0,27,355	0/0:8,0:8:18.02:0,18,1274	1/1:6,10:16:48.16:2210,48,0	1/1:5,0:5:15.03:186,15,0	0/0:36,0:36:99:0,108,5776	0/0:4,0:4:12.04:0,12,1093	0/0:7,0:7:21.07:0,21,1664	0/0:10,0:10:24.08:0,24,1852	0/0:4,0:4:12.04:0,12,1132	0/0:3,0:3:9.03:0,9,429	0/0:4,0:4:3.01:0,3,274	0/0:3,0:3:9.03:0,9,180	0/0:4,0:4:9:0,9,867	0/0:17,0:16:48.16:0,48,4557	0/0:6,0:6:18.06:0,18,1744	0/0:11,0:9:27.09:0,27,1935	0/0:7,0:7:21.07:0,21,1420	0/0:2,0:2:6:0,6,126	0/0:2,0:2:6.02:0,6,530	0/0:6,0:6:18.06:0,18,1271	0/0:1,0:1:3.01:0,3,85	0/0:10,0:10:30.10:0,30,2097	0/0:10,0:10:30.10:0,30,2775	0/0:14,0:14:42.14:0,42,3072	0/0:14,0:14:42.14:0,42,3453
chr10	80499426	.	ATG	A	1775.61	PASS	AB=0.956;AC=31;AF=0.574;AN=54;BaseQRankSum=-3.381;DP=260;FS=9.617;HRun=0;HaplotypeScore=65.0426;InbreedingCoeff=0.3595;MQ=73.13;MQ0=6;MQRankSum=1.326;QD=8.30;ReadPosRankSum=-0.891;VQSLOD=2.0493;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:5.92:41,6,0	0/0:3,0:3:3.02:0,3,7	0/0:15,0:7:4.03:0,4,21	0/1:37,0:15:11.75:12,0,27	0/1:6,0:6:2.02:17,0,2	1/1:18,0:18:20.58:127,21,0	0/0:5,0:5:2.96:0,3,9	1/1:36,0:36:51.09:541,51,0	0/0:4,0:4:12.04:0,12,219	1/1:2,5:7:19.23:168,19,0	0/1:10,0:10:1.07:51,0,1	0/0:4,0:4:9.02:0,9,135	1/1:4,0:4:2.99:24,3,0	1/1:4,0:4:2.99:24,3,0	0/0:2,0:2:0.94:0,1,2	0/0:4,0:4:1.41:0,1,3	0/1:16,1:16:13.13:79,0,13	1/1:5,1:6:0.92:77,1,0	1/1:10,1:8:17.19:144,17,0	1/1:6,0:6:4.83:47,5,0	1/1:1,0:1:2.99:24,3,0	0/0:2,0:2:6:0,6,79	0/0:6,0:6:17.99:0,18,215	./.	1/1:9,1:10:13.88:140,14,0	1/1:9,0:9:13.60:108,14,0	1/1:13,0:13:3.94:87,4,0	0/1:12,3:15:13.96:225,0,14
chr10	80499428	.	GTGTA	G	1230.53	PASS	AB=1.000;AC=21;AF=0.389;AN=54;BaseQRankSum=-4.412;DP=255;FS=20.180;HRun=0;HaplotypeScore=75.6701;InbreedingCoeff=-0.1860;MQ=70.09;MQ0=6;MQRankSum=-0.823;QD=7.03;ReadPosRankSum=-2.452;VQSLOD=0.1174;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:6.02:96,6,0	0/0:3,0:3:9.02:0,9,96	0/0:14,0:6:2.61:0,3,18	0/0:36,0:13:3.31:0,3,52	0/1:6,0:6:11.91:12,0,86	0/1:18,0:18:21.54:218,0,22	0/0:5,0:5:6.47:0,6,50	0/1:37,0:37:99:341,0,324	0/0:4,0:4:12.04:0,12,335	0/1:7,0:7:9.69:104,0,10	0/1:10,0:10:1.28:1,0,173	0/0:3,0:3:9.03:0,9,207	1/1:0,2:2:3.01:60,3,0	1/1:0,4:4:3.01:60,3,0	0/0:3,0:3:6.47:0,6,55	0/0:4,0:4:9.02:0,9,92	0/1:17,0:16:17.98:18,0,328	0/1:6,0:6:38.10:38,0,85	0/1:11,0:8:58.84:88,0,59	0/1:5,0:5:33.83:34,0,80	1/1:1,0:1:2.99:24,3,0	0/0:2,0:2:6:0,6,108	0/0:6,0:6:18.05:0,18,364	./.	0/1:11,0:11:84.77:85,0,124	0/1:9,0:9:27.91:28,0,160	0/1:13,0:13:60.79:61,0,208	0/1:15,0:15:99:116,0,202
chr10	80499579	.	AAC	A	1647.96	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.058;DP=476;FS=0.000;HRun=0;HaplotypeScore=57.4260;InbreedingCoeff=0.9953;MQ=87.06;MQ0=0;MQRankSum=-1.438;QD=38.32;ReadPosRankSum=1.780;VQSLOD=5.6089;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:48.16:734,48,0	0/0:6,0:6:18.06:0,18,347	0/0:19,0:19:51.97:0,52,861	0/0:23,0:23:45.25:0,45,922	0/0:27,0:27:81.26:0,81,1528	0/0:34,0:34:99:0,99,1829	0/0:13,0:13:39.13:0,39,751	0/0:38,0:38:99:0,105,2012	0/0:14,0:14:42.14:0,42,798	0/0:22,0:22:66.19:0,66,1206	0/0:18,0:18:54.19:0,54,1042	0/0:16,0:16:45.05:0,45,794	1/1:0,14:14:39.13:597,39,0	1/1:0,10:10:30.10:459,30,0	0/0:16,0:16:48.16:0,48,917	0/0:9,0:9:27.09:0,27,521	0/0:12,0:12:30.06:0,30,541	0/0:10,0:10:24.08:0,24,448	0/0:13,0:13:36.12:0,36,691	0/0:16,0:16:45.15:0,45,868	0/0:12,0:12:36.12:0,36,695	0/0:10,0:10:30.10:0,30,579	0/0:12,0:12:36.12:0,36,695	0/0:13,0:13:39.09:0,39,683	0/0:20,0:20:54.19:0,54,1043	0/0:19,0:19:54.19:0,54,1042	0/0:23,0:23:69.24:0,69,1332	0/0:18,0:18:51.17:0,51,983
chr10	80501399	.	ATGTGTCTGTGTGTG	A	1121.72	PASS	AB=0.907;AC=9;AF=0.161;AN=56;BaseQRankSum=-4.871;DP=510;FS=5.351;HRun=0;HaplotypeScore=154.7093;InbreedingCoeff=0.1435;MQ=74.10;MQ0=15;MQRankSum=-0.220;QD=8.90;ReadPosRankSum=-0.718;VQSLOD=1.6988;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:63.11:0,63,1609	0/0:11,0:11:5.03:0,5,209	0/0:24,0:16:15.90:0,16,234	0/0:27,0:23:30.87:0,31,355	0/0:25,0:24:4.77:0,5,224	1/1:8,0:9:23.86:222,24,0	0/1:3,7:10:32.83:33,0,121	0/1:29,0:26:57.96:429,0,58	0/0:10,0:10:25.84:0,26,595	0/1:21,0:19:99:128,0,964	1/1:15,0:14:2.92:17,3,0	0/0:15,0:14:25.83:0,26,991	0/0:15,0:15:29.98:0,30,617	0/0:8,0:8:24.04:0,24,640	0/0:15,0:15:8.71:0,9,345	0/0:15,0:14:4.73:0,5,201	0/0:20,0:20:15.05:0,15,564	0/0:26,0:25:9.03:0,9,336	0/1:17,0:17:99:187,0,491	0/0:16,0:16:9.03:0,9,304	0/0:40,0:38:9.03:0,9,330	0/0:9,0:7:17.94:0,18,237	0/0:8,0:7:12.04:0,12,594	0/0:19,0:19:45.05:0,45,1742	0/0:13,0:13:3.01:0,3,116	0/1:24,0:24:99:245,0,616	0/0:26,0:25:10.07:0,10,250	0/0:10,0:10:3.01:0,3,110
chr10	80501401	.	GTGTC	G	2309.43	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=3.218;DP=514;FS=7.776;HRun=0;HaplotypeScore=95.4409;InbreedingCoeff=0.5205;MQ=68.94;MQ0=17;MQRankSum=-1.705;QD=5.91;ReadPosRankSum=-2.520;VQSLOD=1.0339;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:51.29:51,0,278	1/1:10,1:11:3.90:51,4,0	0/0:22,0:14:15.90:0,16,234	0/0:23,0:19:31.01:0,31,355	1/1:25,0:24:5.71:21,6,0	1/1:9,0:9:23.86:192,24,0	0/0:10,0:10:3.01:0,3,52	1/1:30,0:27:67.80:539,68,0	0/0:10,0:10:25.22:0,25,206	1/1:22,0:20:50.63:445,51,0	1/1:15,0:14:2.92:17,3,0	0/0:15,0:14:10.62:0,11,316	0/0:15,0:15:2.09:0,2,188	0/1:8,0:8:41:41,0,124	1/1:17,0:17:7.26:28,7,0	1/1:14,1:13:5.51:66,6,0	1/1:21,0:21:12.65:51,13,0	1/1:26,0:25:7.87:33,8,0	1/1:16,2:17:34.41:368,34,0	1/1:17,0:17:8.50:60,8,0	1/1:40,0:38:8.27:36,8,0	0/1:9,0:7:6.53:7,0,97	0/0:9,0:8:13.41:0,13,170	0/0:19,0:18:44.98:0,45,615	1/1:15,0:15:2.37:8,2,0	1/1:24,0:24:60.29:455,60,0	1/1:26,0:25:2.98:13,3,0	1/1:10,0:10:2.74:12,3,0
chr10	80501403	.	GTC	G	3507.94	PASS	AB=0.993;AC=38;AF=0.679;AN=56;BaseQRankSum=2.989;DP=505;FS=15.474;HRun=0;HaplotypeScore=80.1973;InbreedingCoeff=0.5241;MQ=65.61;MQ0=17;MQRankSum=-1.026;QD=8.68;ReadPosRankSum=-2.807;VQSLOD=1.0324;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:33,1:34:33.70:34,0,290	1/1:1,10:11:5.98:65,6,0	0/0:20,0:12:15.90:0,16,234	0/0:21,0:17:31.01:0,31,355	1/1:2,22:23:6.02:91,6,0	1/1:10,0:10:23.83:178,24,0	0/0:9,0:9:2.94:0,3,18	1/1:28,0:25:68.51:555,69,0	0/0:10,0:10:24.45:0,24,206	1/1:19,4:21:62.44:593,62,0	1/1:2,13:14:2.92:17,3,0	0/1:15,0:14:19.94:20,0,204	0/0:13,0:13:19.44:0,19,206	0/1:8,0:8:4.27:4,0,126	1/1:0,17:17:9.03:137,9,0	1/1:3,12:13:6:70,6,0	1/1:0,23:23:15.05:227,15,0	1/1:2,24:25:9.01:136,9,0	1/1:18,1:18:36.10:416,36,0	1/1:1,16:17:8.82:107,9,0	1/1:2,38:38:9.03:136,9,0	0/0:9,0:7:14.25:0,14,114	0/1:9,0:8:4.49:4,0,104	0/0:19,0:18:22.64:0,23,353	1/1:0,13:13:3.01:46,3,0	1/1:0,23:23:62.93:533,63,0	1/1:0,26:26:5.49:91,5,0	1/1:0,8:8:3.01:46,3,0
chr10	80501405	.	CTGTG	C	241.59	PASS	AB=0.990;AC=12;AF=0.240;AN=50;BaseQRankSum=-0.541;DP=515;FS=8.720;HRun=0;HaplotypeScore=103.4348;InbreedingCoeff=0.0240;MQ=63.08;MQ0=20;MQRankSum=-0.077;QD=1.46;ReadPosRankSum=-0.386;VQSLOD=1.3131;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,3:36:44.33:120,0,44	0/1:13,0:12:21.40:21,0,32	./.	./.	0/0:24,0:23:5.59:0,6,28	0/1:10,0:10:17.94:22,0,18	0/0:9,0:9:5.92:0,6,79	0/0:30,0:26:14.82:0,15,75	0/0:9,0:9:4.26:0,4,52	0/1:24,0:22:22.50:23,0,60	./.	0/0:16,0:15:16.29:0,16,265	1/1:10,3:13:3.01:46,3,0	1/1:9,0:8:5.88:58,6,0	0/0:17,0:17:8.11:0,8,46	0/1:15,0:13:9.64:33,0,10	0/0:25,0:25:14.42:0,14,67	0/0:25,0:24:8.34:0,8,38	0/1:19,0:18:43.33:43,0,45	0/1:18,0:18:10.84:11,0,15	0/0:41,0:39:11.03:0,11,57	0/1:8,0:6:0:0,0,0	0/0:11,0:10:11.83:0,12,132	0/0:19,0:18:24.95:0,25,430	0/0:13,0:13:2.92:0,3,17	0/0:24,0:24:11.03:0,11,57	0/0:26,0:25:7.43:0,7,38	0/0:8,0:8:2.74:0,3,12
chr10	80502125	.	TAA	T	9378.25	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-2.643;DP=521;FS=17.083;HRun=8;HaplotypeScore=113.9573;InbreedingCoeff=0.9951;MQ=72.25;MQ0=0;MQRankSum=-2.200;QD=28.59;ReadPosRankSum=1.560;VQSLOD=3.4452;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:30:65.35:0,65,239	1/1:0,14:14:39.12:472,39,0	0/0:14,0:14:21.05:0,21,316	0/0:7,0:7:15.02:0,15,193	1/1:1,35:36:87.23:1056,87,0	0/0:2,0:20:39.93:0,40,141	0/0:0,0:10:17.35:0,17,66	1/1:2,13:15:35.97:378,36,0	0/0:11,0:11:30.02:0,30,446	1/1:4,24:28:72.22:876,72,0	1/1:1,15:16:42.13:507,42,0	0/0:15,0:15:32.95:0,33,558	0/0:3,0:21:42.42:0,42,149	0/0:2,0:23:42.99:0,43,149	1/1:2,15:17:33.09:399,33,0	1/1:1,14:15:30.09:362,30,0	1/1:1,22:23:42.13:512,42,0	1/1:1,12:13:30.03:347,30,0	1/1:2,19:21:57.03:620,57,0	1/1:2,20:22:54.16:651,54,0	1/1:0,18:18:36.11:439,36,0	0/0:13,0:13:33.11:0,33,558	0/0:20,0:20:48.14:0,48,779	0/0:8,0:8:24.05:0,24,374	1/1:2,28:30:72.22:874,72,0	1/1:0,22:22:66.15:756,66,0	1/1:0,28:28:63.19:764,63,0	1/1:0,10:10:30.09:366,30,0
chr10	80502341	.	TAA	T	6987.88	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-4.792;DP=460;FS=6.590;HRun=13;HaplotypeScore=65.0133;InbreedingCoeff=0.9268;MQ=56.92;MQ0=12;MQRankSum=3.569;QD=21.37;ReadPosRankSum=3.701;VQSLOD=4.3992;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,1:34:47.63:0,48,577	1/1:1,5:6:14.82:145,15,0	0/0:2,0:1:2.98:0,3,22	0/0:8,0:5:11.19:0,11,95	1/1:3,23:26:71.85:680,72,0	0/0:6,0:14:33.06:0,33,339	0/0:3,0:8:17.99:0,18,167	1/1:9,35:40:96.02:925,96,0	0/0:15,0:15:36.08:0,36,482	1/1:2,15:17:44.75:404,45,0	1/1:2,13:14:35.96:349,36,0	0/0:8,0:8:18.02:0,18,236	0/0:11,0:15:26.99:0,27,274	0/0:5,0:14:20.99:0,21,187	1/1:3,10:12:24.02:233,24,0	1/1:1,13:14:33.05:320,33,0	1/1:4,16:21:38.77:361,39,0	1/1:7,12:15:30.05:291,30,0	1/1:2,19:21:50.78:477,51,0	1/1:6,30:36:80.38:727,80,0	1/1:0,4:4:12.02:116,12,0	0/0:2,0:2:3.01:0,3,43	0/0:5,0:5:12.04:0,12,174	0/0:6,0:6:12.04:0,12,169	1/1:3,15:19:32.99:370,33,0	1/1:5,18:21:53.51:523,54,0	1/1:3,21:24:63.09:610,63,0	1/1:0,19:20:42.01:457,42,0
chr10	80502383	.	AAT	A	754.97	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.522;DP=490;FS=6.068;HRun=0;HaplotypeScore=89.2241;InbreedingCoeff=0.9544;MQ=78.18;MQ0=0;MQRankSum=-1.328;QD=35.95;ReadPosRankSum=0.358;VQSLOD=5.7669;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:54.08:0,54,1049	0/0:7,0:7:21.07:0,21,427	0/0:17,0:16:48.16:0,48,937	0/0:9,0:9:23.44:0,23,410	0/0:32,0:32:93.31:0,93,1838	1/1:2,14:16:45.09:676,45,0	1/1:0,5:5:12.04:195,12,0	0/0:36,0:36:99:0,108,2061	0/0:17,0:17:51.18:0,51,1035	0/0:32,0:32:96.33:0,96,1933	0/0:19,0:19:54.19:0,54,1096	0/0:9,0:9:24.08:0,24,487	0/0:13,0:13:39.13:0,39,791	0/0:11,0:11:30.06:0,30,567	0/0:16,0:16:42.14:0,42,853	0/0:12,0:12:36.12:0,36,731	0/0:20,0:20:51.16:0,51,988	0/0:12,0:12:27.09:0,27,548	0/0:28,0:28:84.22:0,84,1561	0/0:25,0:25:75.19:0,75,1382	0/0:8,0:8:24.08:0,24,488	0/0:5,0:5:15.05:0,15,305	0/0:14,0:14:42.14:0,42,852	0/0:5,0:5:12.04:0,12,244	0/0:21,0:21:54.17:0,54,1028	0/0:23,0:23:69.24:0,69,1383	0/0:37,0:37:99:0,111,2130	0/0:17,0:17:48.10:0,48,861
chr10	80503161	.	GT	G	8594.43	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=6.442;DP=501;FS=9.204;HRun=5;HaplotypeScore=104.8726;InbreedingCoeff=0.9946;MQ=72.44;MQ0=0;MQRankSum=-6.096;QD=29.53;ReadPosRankSum=3.052;VQSLOD=4.4885;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:60.20:0,60,819	1/1:0,9:9:24.07:272,24,0	0/0:12,0:12:30.10:0,30,401	0/0:13,0:11:22.61:0,23,289	1/1:2,30:32:74.87:849,75,0	0/0:20,0:20:54.17:0,54,723	0/0:14,0:14:39.01:0,39,457	1/1:0,25:25:75.14:817,75,0	0/0:16,0:16:48.15:0,48,630	1/1:1,21:22:66.19:747,66,0	1/1:0,13:13:36.10:399,36,0	0/0:18,0:18:51.13:0,51,651	0/0:22,0:22:66.22:0,66,902	0/0:18,0:18:51.16:0,51,683	1/1:1,21:22:51.14:577,51,0	1/1:1,13:14:42.12:474,42,0	1/1:1,11:12:33.09:374,33,0	1/1:2,12:14:36.10:408,36,0	1/1:1,16:17:48.09:516,48,0	1/1:3,20:23:66.16:726,66,0	1/1:0,16:16:33.09:374,33,0	0/0:15,0:15:42.14:0,42,567	0/0:20,0:20:60.20:0,60,821	0/0:17,0:17:45.09:0,45,578	1/1:5,15:20:51.09:554,51,0	1/1:2,22:24:66.17:737,66,0	1/1:1,20:21:57.16:646,57,0	1/1:3,4:7:11.79:124,12,0
chr10	80503191	.	A	AT	10934.18	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=10.524;DP=587;FS=22.833;HRun=7;HaplotypeScore=150.1448;InbreedingCoeff=0.9963;MQ=68.23;MQ0=2;MQRankSum=-10.491;QD=25.73;ReadPosRankSum=0.086;VQSLOD=2.8196;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:25:48.94:253,49,0	1/1:3,8:11:27.08:315,27,0	0/0:30,0:21:29.53:0,30,319	0/0:37,0:26:49.92:0,50,468	1/1:9,22:31:75.21:864,75,0	1/1:3,18:21:51.16:613,51,0	1/1:0,12:12:33.10:391,33,0	1/1:16,19:35:81.67:957,82,0	0/0:18,0:18:51.08:0,51,493	1/1:9,17:26:66.67:783,67,0	1/1:4,11:15:39.07:445,39,0	0/0:24,0:24:69.11:0,69,666	1/1:10,0:23:58.24:310,58,0	1/1:5,0:17:37.44:196,37,0	1/1:6,18:23:66.20:787,66,0	1/1:5,10:15:39.12:466,39,0	1/1:10,11:21:57.02:637,57,0	1/1:8,5:13:26.92:285,27,0	1/1:10,8:18:45.41:515,45,0	1/1:9,17:26:66.12:756,66,0	1/1:4,7:11:30.09:353,30,0	0/0:16,0:16:42.07:0,42,405	0/0:20,0:20:48.07:0,48,464	0/0:16,0:16:39.06:0,39,377	1/1:9,7:16:30.09:357,30,0	1/1:8,18:26:60.18:716,60,0	1/1:10,20:28:70:791,70,0	1/1:5,3:8:14.95:145,15,0
chr10	80503200	.	C	CTT	9421.98	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=11.237;DP=618;FS=12.978;HRun=8;HaplotypeScore=170.4849;InbreedingCoeff=0.9147;MQ=68.80;MQ0=5;MQRankSum=-12.466;QD=21.27;ReadPosRankSum=-2.020;VQSLOD=1.7556;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:23:29.63:335,30,0	1/1:4,5:13:21.06:282,21,0	0/0:40,0:27:24.22:0,24,519	0/0:39,0:26:40.19:0,40,430	1/1:17,16:33:42.50:794,42,0	1/1:3,0:21:42.83:346,43,0	1/1:4,0:13:13.87:250,14,0	1/1:25,9:35:42.45:504,42,0	0/0:22,0:22:66.18:0,66,735	1/1:11,15:30:50.06:827,50,0	1/1:5,10:16:28.86:416,29,0	0/0:26,0:26:69.16:0,69,759	1/1:10,0:25:2.95:266,3,0	1/1:5,1:16:2.75:186,3,0	1/1:10,13:24:44.44:628,44,0	1/1:6,10:17:34.36:506,34,0	1/1:10,10:20:22.86:414,23,0	1/1:7,5:12:15.95:210,16,0	1/1:17,4:20:24.77:326,25,0	1/1:12,15:30:62.26:796,62,0	1/1:8,0:11:9.90:93,10,0	0/0:14,0:14:33.08:0,33,368	0/0:17,0:17:51.14:0,51,569	0/0:14,0:14:36.09:0,36,401	1/1:3,14:18:30.10:462,30,0	1/1:9,14:25:43.21:764,43,0	1/1:9,18:27:58.34:828,58,0	1/1:5,3:9:11.34:187,11,0
chr10	80503208	.	TC	T	2838.79	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=12.478;DP=543;FS=14.033;HRun=3;HaplotypeScore=150.5179;InbreedingCoeff=0.9474;MQ=66.45;MQ0=8;MQRankSum=-8.894;QD=7.89;ReadPosRankSum=-1.103;VQSLOD=-0.2313;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,1:20:25.57:144,26,0	1/1:9,0:9:14.07:45,14,0	0/0:39,1:24:38.79:0,39,604	0/0:42,1:21:45.57:0,46,439	1/1:24,0:23:36.05:174,36,0	1/1:19,0:19:41.49:193,41,0	1/1:14,0:14:20.68:125,21,0	1/1:21,0:21:41.92:221,42,0	0/0:25,0:24:72.21:0,72,960	1/1:27,0:27:52.23:271,52,0	1/1:16,0:16:30.41:166,30,0	0/0:25,0:25:75.23:0,75,1002	1/1:20,0:20:14.55:132,15,0	1/1:15,1:16:21.08:148,21,0	1/1:17,1:17:30.19:105,30,0	1/1:14,0:14:27.27:119,27,0	1/1:19,0:19:35.42:196,35,0	1/1:10,0:10:19.82:101,20,0	1/1:8,0:8:8.56:46,9,0	1/1:26,0:26:48.58:242,49,0	1/1:5,0:5:5.19:14,5,0	0/0:13,0:13:39.09:0,39,490	0/0:21,0:21:63.16:0,63,803	0/0:15,0:15:42.02:0,42,521	1/1:18,0:18:28.35:141,28,0	1/1:22,0:22:29.64:166,30,0	1/1:27,0:26:55.47:258,55,0	1/1:7,0:7:8.90:34,9,0
chr10	80505079	.	CAG	C	1158.34	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.251;DP=542;FS=6.262;HRun=0;HaplotypeScore=92.7016;InbreedingCoeff=0.9969;MQ=64.43;MQ0=0;MQRankSum=-0.095;QD=32.18;ReadPosRankSum=2.103;VQSLOD=6.0253;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.27:0,90,1611	0/0:12,0:12:36.12:0,36,663	0/0:14,0:14:38.90:0,39,660	0/0:10,0:8:21.07:0,21,372	0/0:26,0:26:75.23:0,75,1319	1/1:1,17:19:45.15:662,45,0	1/1:1,16:17:42.14:618,42,0	0/0:31,0:31:87.30:0,87,1606	0/0:19,0:19:54.19:0,54,1004	0/0:21,0:21:60.19:0,60,1068	0/0:19,0:19:57.20:0,57,1067	0/0:28,0:28:84.27:0,84,1489	0/0:21,0:21:57.20:0,57,1043	0/0:22,0:22:63.22:0,63,1179	0/0:15,0:15:45.15:0,45,842	0/0:17,0:17:51.17:0,51,948	0/0:19,0:19:54.18:0,54,981	0/0:11,0:11:30.10:0,30,551	0/0:18,0:18:54.19:0,54,998	0/0:25,0:25:75.24:0,75,1373	0/0:9,0:9:27.09:0,27,471	0/0:16,0:16:48.16:0,48,893	0/0:30,0:30:87.30:0,87,1587	0/0:18,0:18:54.18:0,54,962	0/0:21,0:21:60.21:0,60,1123	0/0:24,0:24:72.23:0,72,1283	0/0:19,0:19:57.20:0,57,1067	0/0:11,0:11:33.10:0,33,587
chr10	80505970	.	TAA	T	1567.41	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.680;DP=480;FS=1.778;HRun=12;HaplotypeScore=66.6660;InbreedingCoeff=0.9695;MQ=77.43;MQ0=1;MQRankSum=-3.510;QD=21.47;ReadPosRankSum=2.252;VQSLOD=3.3502;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,29:32:77.28:753,77,0	0/0:10,0:12:32.59:0,33,438	0/0:17,0:15:17.89:0,18,226	0/0:17,0:16:25.59:0,26,281	0/0:23,0:23:62.69:0,63,885	0/0:5,0:13:17.47:0,17,61	0/0:2,0:12:8.92:0,9,63	0/0:20,0:23:41.11:0,41,545	0/0:12,0:12:33.06:0,33,428	0/0:13,0:13:33.10:0,33,474	0/0:11,0:12:33.09:0,33,455	0/0:9,0:10:27.09:0,27,384	1/1:1,18:20:47.68:469,48,0	1/1:2,18:19:48.10:488,48,0	0/0:27,0:29:80.74:0,81,1135	0/0:19,0:19:54.17:0,54,776	0/0:16,0:18:47.43:0,47,613	0/0:12,0:12:30.07:0,30,425	0/0:9,0:13:31.56:0,32,366	0/0:11,0:13:27.82:0,28,351	0/0:12,0:13:29.59:0,30,403	0/0:8,0:8:24.07:0,24,339	0/0:10,0:13:30.07:0,30,381	0/0:18,0:18:48.16:0,48,715	0/0:25,0:26:77.75:0,78,1121	0/0:23,0:24:47.65:0,48,679	0/0:25,0:24:60.12:0,60,865	0/0:11,0:11:24.07:0,24,333
chr10	80506100	.	CATATATATATAT	C	4618.93	PASS	AB=0.785;AC=27;AF=0.540;AN=50;BaseQRankSum=1.775;DP=248;FS=8.425;HRun=0;HaplotypeScore=107.9375;InbreedingCoeff=0.3910;MQ=63.32;MQ0=3;MQRankSum=-2.663;QD=27.33;ReadPosRankSum=2.921;VQSLOD=3.2346;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:0.47:0,0,1	0/0:1,2:3:0.47:0,0,1	0/0:5,0:4:0.47:0,0,1	0/0:15,0:9:3.38:0,3,95	1/1:4,8:13:2.07:77,2,0	0/0:13,0:13:6.48:0,6,124	./.	0/1:6,8:13:99:595,0,107	./.	1/1:2,4:6:12.04:422,12,0	1/1:12,5:20:8.93:172,9,0	0/0:2,0:2:3.01:0,3,154	1/1:13,0:14:11.90:91,12,0	0/1:7,0:9:13.48:13,0,20	1/1:1,4:8:12.04:292,12,0	1/1:3,1:6:12.02:225,12,0	1/1:2,3:7:12.04:376,12,0	1/1:3,1:5:9.03:233,9,0	0/1:8,1:9:99:114,0,140	1/1:3,7:11:2.92:72,3,0	0/0:5,0:6:3.01:0,3,147	0/0:3,0:3:3.01:0,3,179	0/0:2,0:2:3.01:0,3,179	0/0:3,0:3:6.02:0,6,358	1/1:8,3:13:15.02:246,15,0	1/1:4,6:11:24.08:745,24,0	1/1:5,12:23:36.06:944,36,0	./.
chr10	80506119	.	ATATATATGTG	A	2134.13	PASS	AB=1.000;AC=22;AF=0.407;AN=54;BaseQRankSum=1.574;DP=257;FS=0.757;HRun=0;HaplotypeScore=123.3856;InbreedingCoeff=0.1013;MQ=47.36;MQ0=5;MQRankSum=-2.718;QD=11.35;ReadPosRankSum=6.584;VQSLOD=1.7462;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:0.47:0,0,1	0/0:4,0:4:0:0,0,0	0/0:2,0:1:0:0,0,0	0/0:11,0:7:5.36:0,5,30	0/1:15,0:14:5.01:51,0,5	0/0:10,0:9:2.99:0,3,25	./.	0/1:22,0:20:67.07:217,0,67	0/0:2,0:2:6.02:0,6,154	0/1:10,0:10:22.38:164,0,22	1/1:13,0:13:2.95:30,3,0	0/0:1,0:1:3.01:0,3,99	1/1:1,16:17:11.97:353,12,0	1/1:6,2:8:5.89:149,6,0	1/1:12,0:11:8.09:161,8,0	1/1:4,0:4:6.02:90,6,0	0/1:13,0:13:27.51:155,0,28	0/1:5,0:5:7.47:69,0,7	0/1:12,0:11:33.58:34,0,143	1/1:10,0:10:2.95:31,3,0	0/0:6,0:6:7.08:0,7,145	0/0:4,0:4:3.01:0,3,160	0/0:2,0:2:3.01:0,3,161	0/0:6,0:6:9.03:0,9,363	1/1:8,0:7:6.01:61,6,0	0/1:17,0:17:99:279,0,112	0/1:22,0:21:11.27:441,0,11	0/0:7,0:7:11.15:0,11,52
chr10	80506121	.	ATATATGTG	A	1416.63	PASS	AB=1.000;AC=22;AF=0.407;AN=54;BaseQRankSum=2.494;DP=259;FS=0.726;HRun=0;HaplotypeScore=123.0753;InbreedingCoeff=0.1187;MQ=41.96;MQ0=5;MQRankSum=-1.650;QD=7.34;ReadPosRankSum=6.778;VQSLOD=1.7643;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:3,11:14:0:0,0,0	0/0:4,0:4:0:0,0,0	0/0:2,0:1:3.01:0,3,54	0/0:7,0:5:10.93:0,11,93	0/1:16,0:15:5.29:16,0,5	0/0:5,0:9:0:0,0,1	./.	0/1:24,0:21:56.39:127,0,56	0/0:3,0:3:9.03:0,9,180	0/1:10,0:10:21.82:99,0,22	1/1:13,0:13:2.98:44,3,0	0/0:1,0:1:3.01:0,3,73	1/1:17,0:17:12.04:230,12,0	1/1:8,0:8:5.92:90,6,0	1/1:12,0:11:8.06:136,8,0	1/1:4,0:4:6:67,6,0	0/1:14,0:14:31.49:116,0,31	0/1:5,0:5:7.47:62,0,7	0/1:13,0:12:16.43:16,0,102	1/1:10,0:10:3.01:46,3,0	0/0:6,0:6:7.08:0,7,120	0/0:4,0:4:3.01:0,3,134	0/0:2,0:2:3.01:0,3,135	0/0:5,0:5:9.03:0,9,311	1/1:8,0:7:6.02:86,6,0	0/1:17,0:17:99:162,0,113	0/1:22,0:21:11.39:271,0,11	0/0:7,0:7:11.15:0,11,52
chr10	80506149	.	G	GTATA	2147.59	PASS	AB=0.854;AC=25;AF=0.500;AN=50;BaseQRankSum=8.119;DP=313;FS=15.417;HRun=0;HaplotypeScore=137.3320;InbreedingCoeff=0.5243;MQ=40.61;MQ0=12;MQRankSum=-7.538;QD=12.07;ReadPosRankSum=1.723;VQSLOD=2.6318;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:8.83:0,9,127	./.	0/0:23,0:8:24.07:0,24,390	0/0:20,0:14:20.73:0,21,414	1/1:15,2:16:2.84:15,3,0	./.	./.	1/1:22,0:20:21.76:522,22,0	0/0:5,0:5:12.04:0,12,215	1/1:5,4:11:18.68:312,19,0	1/1:9,3:15:3.01:40,3,0	0/0:4,0:4:12.04:0,12,203	0/0:19,0:19:15.05:0,15,222	0/0:9,0:9:9.03:0,9,122	1/1:8,1:8:6.49:79,6,0	1/1:6,0:6:6.02:79,6,0	0/1:8,4:13:13.82:116,0,14	1/1:3,1:3:6.91:125,7,0	0/1:7,1:6:26.35:170,0,26	1/1:6,3:9:2.91:39,3,0	0/0:2,2:4:2.79:0,3,23	0/0:6,0:6:3.01:0,3,60	0/0:5,0:5:12.04:0,12,219	0/0:8,0:8:15.05:0,15,284	1/1:12,1:11:6.02:82,6,0	0/1:18,1:19:19.98:280,0,20	1/1:22,2:23:35.92:358,36,0	1/1:3,4:7:11.86:108,12,0
chr10	80506151	.	G	GTATA	1955.52	PASS	AB=0.788;AC=26;AF=0.500;AN=52;BaseQRankSum=8.222;DP=253;FS=12.204;HRun=0;HaplotypeScore=99.1002;InbreedingCoeff=0.6147;MQ=43.35;MQ0=12;MQRankSum=-6.883;QD=16.43;ReadPosRankSum=4.763;VQSLOD=2.0851;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:11.81:0,12,158	./.	0/0:23,0:8:24.08:0,24,423	0/0:20,0:14:38.62:0,39,526	1/1:10,0:10:2.84:14,3,0	0/0:10,0:9:2.92:0,3,17	./.	1/1:13,0:12:18.05:407,18,0	0/0:5,0:5:12.04:0,12,216	1/1:6,0:6:9.03:166,9,0	1/1:9,0:9:3.01:40,3,0	0/0:4,0:4:12.04:0,12,203	0/0:19,0:19:20.95:0,21,225	0/0:11,0:11:12:0,12,145	1/1:7,0:7:8.94:95,9,0	1/1:6,0:6:8.92:95,9,0	1/1:9,0:9:8.86:83,9,0	1/1:4,0:3:9.03:158,9,0	0/1:6,0:4:17.27:131,0,17	1/1:4,0:4:3.01:39,3,0	0/0:4,0:4:2.79:0,3,24	0/0:5,0:5:6.01:0,6,85	0/0:5,0:5:12.04:0,12,219	0/0:9,0:9:15.05:0,15,275	1/1:9,0:8:6.02:84,6,0	0/1:4,11:15:10.36:298,0,10	1/1:16,0:15:35.84:422,36,0	1/1:5,0:5:9.03:110,9,0
chr10	80507716	.	G	GTATA	337.86	PASS	AB=1.000;AC=14;AF=0.389;AN=36;BaseQRankSum=-0.217;DP=145;FS=1.440;HRun=0;HaplotypeScore=44.9182;InbreedingCoeff=0.3801;MQ=84.52;MQ0=3;MQRankSum=-0.150;QD=4.22;ReadPosRankSum=-3.050;VQSLOD=0.8834;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:2.99:23,3,0	./.	0/1:7,0:5:0.04:1,0,0	0/1:21,0:12:0.07:0,0,0	0/0:4,0:4:3:0,3,26	0/0:8,0:8:1.93:0,2,17	./.	1/1:21,0:20:10.31:76,10,0	./.	./.	0/0:3,0:3:2.47:0,2,25	0/0:9,0:9:21.04:0,21,299	1/1:7,3:10:17.65:260,18,0	1/1:3,1:4:3.01:71,3,0	0/0:3,0:3:3:0,3,26	0/0:8,0:8:8.99:0,9,74	1/1:5,0:5:0.47:1,0,0	./.	./.	./.	./.	./.	0/0:6,0:6:6.02:0,6,101	0/0:3,0:3:6.02:0,6,97	0/1:3,0:3:17.78:18,0,20	./.	0/1:5,0:5:0:0,0,0	0/0:4,0:4:2.77:0,3,24
chr10	80507731	.	TAC	T	1108.22	PASS	AB=1.000;AC=31;AF=0.738;AN=42;BaseQRankSum=3.244;DP=132;FS=0.000;HRun=0;HaplotypeScore=43.1473;InbreedingCoeff=0.4272;MQ=73.59;MQ0=3;MQRankSum=-0.219;QD=11.67;ReadPosRankSum=-0.241;VQSLOD=2.5151;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:7:33.08:46,0,33	1/1:2,1:3:2.98:25,3,0	0/1:8,0:5:0:0,0,0	0/0:17,0:7:1.82:0,2,5	1/1:3,1:4:5.99:51,6,0	1/1:8,2:10:11.98:97,12,0	./.	1/1:13,3:15:34.07:276,34,0	./.	./.	1/1:1,1:2:6:51,6,0	0/0:8,0:8:24.03:0,24,359	0/1:9,0:9:2.51:98,0,3	1/1:5,0:5:1.68:54,2,0	1/1:2,3:5:8.99:76,9,0	1/1:0,6:6:9.01:97,9,0	1/1:4,1:5:8.98:73,9,0	1/1:1,0:1:2.94:18,3,0	./.	1/1:1,0:1:3:25,3,0	./.	./.	0/0:6,0:6:12:0,12,162	0/0:3,0:3:9:0,9,106	1/1:2,1:3:8.99:75,9,0	./.	1/1:3,0:3:6.46:49,6,0	1/1:6,1:7:19.52:131,20,0
chr10	80507733	.	C	CAT	281.96	PASS	AB=1.000;AC=14;AF=0.368;AN=38;BaseQRankSum=0.560;DP=130;FS=1.421;HRun=0;HaplotypeScore=49.2967;InbreedingCoeff=0.3995;MQ=73.92;MQ0=3;MQRankSum=-1.256;QD=3.97;ReadPosRankSum=-1.770;VQSLOD=1.1341;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:7:32.93:33,0,67	./.	0/1:8,0:5:0.01:0,0,0	0/1:18,0:7:0.01:0,0,0	0/0:4,0:4:2.80:0,3,13	0/0:10,0:10:2.84:0,3,14	./.	1/1:14,0:13:6.79:40,7,0	./.	./.	0/0:2,0:2:2.80:0,3,13	0/0:7,0:7:18.04:0,18,206	1/1:6,3:9:11.07:135,11,0	1/1:4,1:5:12.04:182,12,0	0/0:5,0:5:2.77:0,3,13	0/0:6,0:6:8.27:0,8,37	1/1:5,0:5:0.47:1,0,0	1/1:2,0:2:0.47:1,0,0	./.	./.	./.	./.	0/0:7,0:7:11.97:0,12,126	0/0:3,0:3:6.02:0,6,72	0/0:3,0:3:2.80:0,3,13	./.	0/1:3,0:3:0:0,0,0	0/0:7,0:7:2.55:0,3,13
chr10	80507747	.	TATAC	T	1340.86	PASS	AC=28;AF=0.609;AN=46;BaseQRankSum=1.229;DP=150;FS=13.870;HRun=0;HaplotypeScore=42.6757;InbreedingCoeff=0.7312;MQ=83.39;MQ0=2;MQRankSum=-2.321;QD=17.41;ReadPosRankSum=-0.277;VQSLOD=0.9980;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:15.02:0,15,225	./.	0/0:11,0:9:17.98:0,18,155	0/0:13,0:4:2.47:0,2,19	1/1:6,1:7:11.99:111,12,0	1/1:7,0:7:6.01:65,6,0	./.	1/1:18,1:18:45.03:460,45,0	0/0:4,0:4:9.01:0,9,116	1/1:1,0:1:3:28,3,0	1/1:2,0:2:3.01:54,3,0	0/0:8,0:8:24.04:0,24,479	0/0:7,0:7:17.95:0,18,185	0/0:8,0:8:20.97:0,21,254	1/1:5,0:5:9:103,9,0	1/1:4,1:5:8.76:105,9,0	1/1:3,0:3:3:25,3,0	1/1:2,0:2:0.85:2,1,0	./.	1/1:5,0:5:8.99:75,9,0	1/1:1,0:1:2.99:24,3,0	./.	0/0:8,0:8:24.05:0,24,410	0/0:5,0:5:12.02:0,12,224	1/1:4,0:4:9:103,9,0	./.	1/1:7,0:7:11.97:96,12,0	1/1:8,1:9:26.97:263,27,0
chr10	80507749	.	TAC	T	1360.89	PASS	AC=30;AF=0.600;AN=50;BaseQRankSum=1.007;DP=156;FS=10.718;HRun=0;HaplotypeScore=34.1796;InbreedingCoeff=0.7637;MQ=85.27;MQ0=2;MQRankSum=-3.303;QD=16.60;ReadPosRankSum=-0.791;VQSLOD=1.9248;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:15.02:0,15,196	./.	0/0:11,0:9:20.98:0,21,180	0/0:12,0:5:5.50:0,6,42	1/1:6,0:6:11.50:98,12,0	1/1:8,0:8:11.99:101,12,0	./.	1/1:17,2:18:50.88:446,51,0	0/0:4,0:4:9:0,9,94	1/1:1,0:1:3:28,3,0	1/1:1,1:2:6:51,6,0	0/0:9,0:9:27.04:0,27,389	0/0:7,0:7:17.99:0,18,129	0/0:8,0:8:21.02:0,21,232	1/1:2,3:5:8.99:76,9,0	1/1:4,1:5:9.01:98,9,0	1/1:3,0:3:3:25,3,0	1/1:5,0:5:7.70:51,8,0	./.	1/1:5,0:5:11.99:100,12,0	1/1:1,0:1:2.99:24,3,0	0/0:1,0:1:2.99:0,3,24	0/0:8,0:8:23.96:0,24,312	0/0:5,0:5:15.02:0,15,211	1/1:2,1:3:8.99:76,9,0	1/1:2,0:2:6:54,6,0	1/1:6,0:6:11.97:96,12,0	1/1:11,0:11:31.48:226,31,0
chr10	80507901	.	A	AG	2330.99	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.021;DP=511;FS=8.497;HRun=2;HaplotypeScore=95.2164;InbreedingCoeff=0.9962;MQ=90.84;MQ0=0;MQRankSum=-4.109;QD=37.00;ReadPosRankSum=1.053;VQSLOD=3.6528;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:78.26:1087,78,0	0/0:7,0:7:21.05:0,21,248	0/0:16,0:16:35.29:0,35,475	0/0:25,0:25:74.78:0,75,864	0/0:14,0:14:39.12:0,39,483	0/0:21,0:21:57.16:0,57,693	0/0:12,0:12:36.06:0,36,416	0/0:34,0:34:93.23:0,93,1115	0/0:27,0:27:75.22:0,75,917	0/0:14,0:14:39.12:0,39,475	0/0:16,0:16:48.10:0,48,564	0/0:17,0:17:48.11:0,48,578	1/1:2,14:16:42.14:591,42,0	1/1:1,19:20:57.19:796,57,0	0/0:28,0:28:84.24:0,84,1016	0/0:17,0:17:48.12:0,48,569	0/0:10,0:10:27.08:0,27,335	0/0:7,0:7:21.05:0,21,246	0/0:17,0:17:48.14:0,48,584	0/0:27,0:27:78.24:0,78,966	0/0:35,0:35:99:0,99,1226	0/0:13,0:13:33.10:0,33,409	0/0:11,0:11:33.10:0,33,409	0/0:11,0:11:30.08:0,30,358	0/0:21,0:21:60.18:0,60,731	0/0:18,0:18:54.16:0,54,658	0/0:18,0:18:54.17:0,54,669	0/0:12,0:12:36.11:0,36,446
chr10	80508293	.	C	CAA	11344.23	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-5.610;DP=604;FS=2.475;HRun=11;HaplotypeScore=92.6694;InbreedingCoeff=0.9850;MQ=75.15;MQ0=0;MQRankSum=-2.906;QD=24.34;ReadPosRankSum=-2.717;VQSLOD=4.2413;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,8:14:26.57:335,27,0	1/1:0,7:9:20.55:254,21,0	0/0:19,0:21:41.94:0,42,300	0/0:11,0:11:13.83:0,14,119	1/1:3,21:25:57.13:746,57,0	1/1:8,22:29:51.17:727,51,0	1/1:1,8:12:26.51:298,27,0	1/1:8,17:28:60.14:797,60,0	0/0:14,0:16:23.90:0,24,277	1/1:3,20:27:62.68:797,63,0	1/1:3,17:23:53.36:560,53,0	0/0:25,0:25:53.87:0,54,550	1/1:7,21:29:38.53:477,39,0	1/1:6,7:15:26.03:293,26,0	1/1:4,20:26:33.11:478,33,0	1/1:8,17:25:13.04:530,13,0	1/1:5,20:28:51.54:705,52,0	1/1:6,6:14:17.03:186,17,0	1/1:5,13:20:45.48:589,45,0	1/1:5,33:38:96.83:1262,97,0	1/1:1,14:17:41.62:559,42,0	0/0:29,0:29:70.78:0,71,689	0/0:22,0:22:49.25:0,49,462	0/0:14,0:14:35.97:0,36,339	1/1:1,14:20:38.58:473,39,0	1/1:4,12:16:37.92:500,38,0	1/1:11,21:37:46.98:560,47,0	1/1:0,12:12:15.05:217,15,0
chr10	80509015	.	C	CAT	2092.58	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.082;DP=557;FS=0.586;HRun=0;HaplotypeScore=62.5210;InbreedingCoeff=0.8907;MQ=75.49;MQ0=1;MQRankSum=-0.106;QD=33.75;ReadPosRankSum=1.828;VQSLOD=5.5265;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:25:48.16:816,48,0	0/0:11,0:11:24.08:0,24,312	0/0:17,0:13:4.03:0,4,47	0/0:24,0:15:4.17:0,4,54	0/0:29,0:29:78.25:0,78,1014	0/0:21,0:21:54.18:0,54,702	0/0:16,0:16:45.15:0,45,585	0/0:33,0:33:75.22:0,75,950	0/0:7,0:7:18.06:0,18,234	0/0:26,0:26:69.22:0,69,890	0/0:27,0:27:69.20:0,69,869	0/0:20,0:20:54.18:0,54,702	1/1:1,14:15:36.12:610,36,0	1/1:1,20:21:48.16:809,48,0	0/0:21,0:21:57.18:0,57,741	0/0:19,0:19:48.16:0,48,624	0/0:10,0:10:18.06:0,18,234	0/0:9,0:9:24.08:0,24,312	0/0:24,0:24:57.16:0,57,724	0/0:42,0:42:99:0,111,1429	0/0:6,0:6:15.05:0,15,195	0/0:13,0:13:27.04:0,27,332	0/0:24,0:24:66.21:0,66,858	0/0:13,0:13:36.10:0,36,453	0/0:21,0:21:48.13:0,48,596	0/0:19,0:19:48.16:0,48,624	0/0:33,0:33:84.27:0,84,1081	0/0:10,0:10:21.07:0,21,273
chr10	80509879	.	G	GAGAGAC	2167.43	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-2.104;DP=649;FS=13.352;HRun=0;HaplotypeScore=134.2757;InbreedingCoeff=0.9593;MQ=64.90;MQ0=5;MQRankSum=-7.585;QD=36.12;ReadPosRankSum=-2.058;VQSLOD=2.2342;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,8:26:9.63:556,10,0	0/0:5,0:5:12.04:0,12,251	0/0:43,0:27:47.63:0,48,705	0/0:51,0:34:24.46:0,24,448	0/0:26,0:26:60.21:0,60,1255	0/0:37,0:37:75.23:0,75,1417	0/0:16,0:16:30.09:0,30,574	0/0:42,0:42:48.13:0,48,839	0/0:26,0:26:57.20:0,57,1179	0/0:22,0:22:39.07:0,39,700	0/0:16,0:16:33.10:0,33,638	0/0:23,0:23:54.16:0,54,1043	1/1:6,5:12:24.08:737,24,0	1/1:7,14:22:33.11:1011,33,0	0/0:18,0:18:30.10:0,30,599	0/0:20,0:20:48.15:0,48,954	0/0:31,0:31:53.06:0,53,1259	0/0:8,0:8:13.78:0,14,171	0/0:15,0:15:27.09:0,27,530	0/0:27,0:27:51.18:0,51,1066	0/0:23,0:23:36.11:0,36,714	0/0:11,0:11:24.08:0,24,502	0/0:28,0:28:45.15:0,45,880	0/0:11,0:11:24.01:0,24,333	0/0:19,0:19:48.08:0,48,958	0/0:17,0:17:48.16:0,48,966	0/0:31,0:30:78.20:0,78,1475	0/0:20,0:19:36.05:0,36,669
chr10	80510524	.	G	GCACACACA	9766.13	PASS	AB=0.693;AC=39;AF=0.722;AN=54;BaseQRankSum=-0.119;DP=622;FS=0.520;HRun=0;HaplotypeScore=186.3987;InbreedingCoeff=0.5789;MQ=52.59;MQ0=3;MQRankSum=-7.787;QD=21.46;ReadPosRankSum=-4.810;VQSLOD=3.0520;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:28:26.41:447,26,0	0/1:9,5:16:41.09:467,0,41	./.	0/0:23,0:7:3.01:0,3,42	1/1:28,9:44:5.09:245,5,0	1/1:19,0:20:11.42:333,11,0	1/1:26,0:26:11.91:232,12,0	1/1:14,0:13:12.04:365,12,0	0/0:23,0:26:48.16:0,48,1093	1/1:22,1:31:36.11:819,36,0	1/1:19,5:27:13.79:515,14,0	0/0:20,0:22:44.78:0,45,971	0/1:10,0:25:42.77:447,0,43	1/1:8,0:20:27.08:539,27,0	1/1:15,14:32:11.31:912,11,0	0/1:15,9:24:48.84:960,0,49	1/1:12,1:16:12.03:336,12,0	1/1:5,2:7:9.58:367,10,0	1/1:14,0:14:15.37:305,15,0	1/1:14,3:19:9.02:271,9,0	1/1:17,0:22:8.49:161,8,0	0/0:24,0:26:47.83:0,48,1000	0/0:16,0:17:36.08:0,36,703	0/0:22,0:25:57.19:0,57,1396	1/1:14,4:20:8.85:368,9,0	1/1:16,6:23:36.11:1082,36,0	1/1:19,1:20:17.72:565,18,0	1/1:4,0:4:3:29,3,0
chr10	80512463	.	TA	T	17101.92	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=10.669;DP=615;FS=3.435;HRun=3;HaplotypeScore=107.6347;InbreedingCoeff=0.9956;MQ=60.77;MQ0=0;MQRankSum=-9.963;QD=34.48;ReadPosRankSum=-1.645;VQSLOD=3.9623;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,43:47:99:1642,135,0	1/1:1,8:9:24.08:297,24,0	0/0:9,0:9:24.08:0,24,334	0/0:9,0:9:24.03:0,24,276	1/1:1,26:27:63.18:767,63,0	1/1:0,16:16:48.15:594,48,0	1/1:4,23:27:72.23:890,72,0	1/1:0,23:23:69.22:855,69,0	0/0:15,0:15:45.15:0,45,648	1/1:0,25:25:72.23:890,72,0	1/1:3,24:27:69.22:854,69,0	0/0:28,0:28:84.28:0,84,1209	1/1:0,29:29:87.27:1077,87,0	1/1:1,28:29:87.23:1059,87,0	1/1:2,29:31:87.27:1076,87,0	1/1:2,19:21:60.18:730,60,0	1/1:1,35:36:99:1226,99,0	1/1:0,12:12:36.11:446,36,0	1/1:1,14:15:45.13:547,45,0	1/1:3,20:23:69.20:840,69,0	1/1:4,22:26:60.61:703,61,0	0/0:23,0:23:60.20:0,60,858	0/0:9,0:9:24.07:0,24,327	0/0:26,0:26:78.25:0,78,1106	1/1:2,20:22:66.17:788,66,0	1/1:0,22:22:66.21:818,66,0	1/1:1,22:23:66.21:818,66,0	1/1:0,6:6:15.05:186,15,0
chr10	80512491	.	CG	C	11654.09	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=10.461;DP=562;FS=1.405;HRun=6;HaplotypeScore=115.6105;InbreedingCoeff=0.9596;MQ=66.25;MQ0=1;MQRankSum=-10.212;QD=25.56;ReadPosRankSum=-0.282;VQSLOD=3.6237;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,43:48:99:1255,118,0	1/1:1,6:7:15.04:161,15,0	0/0:7,0:7:15.02:0,15,167	0/0:15,0:15:33.10:0,33,421	1/1:3,23:26:57.14:610,57,0	1/1:0,20:20:57.14:612,57,0	1/1:4,20:24:69.15:731,69,0	1/1:6,18:24:63.14:667,63,0	0/0:16,0:16:45.15:0,45,592	1/1:5,16:21:51.09:534,51,0	1/1:1,20:21:51.11:539,51,0	0/0:19,0:19:48.10:0,48,570	1/1:5,18:23:60.15:643,60,0	1/1:4,18:22:54.13:579,54,0	1/1:4,27:31:66.14:700,66,0	1/1:1,17:18:45.11:483,45,0	1/1:10,19:29:54.13:577,54,0	1/1:2,11:13:30.07:322,30,0	1/1:3,8:11:24.06:257,24,0	1/1:3,25:28:72.18:771,72,0	1/1:3,20:23:39.56:420,40,0	0/0:19,0:19:54.18:0,54,711	0/0:5,0:5:15.05:0,15,197	0/0:25,0:25:69.18:0,69,888	1/1:4,19:23:60.14:636,60,0	1/1:5,15:20:48.12:514,48,0	1/1:1,20:21:57.14:611,57,0	1/1:1,1:2:3.01:32,3,0
chr10	80513172	.	A	AAAAC	2496.94	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.607;DP=598;FS=12.350;HRun=0;HaplotypeScore=93.3571;InbreedingCoeff=0.9248;MQ=70.70;MQ0=2;MQRankSum=0.530;QD=33.29;ReadPosRankSum=0.304;VQSLOD=3.0344;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,13:21:30.10:631,30,0	0/0:8,0:8:18.06:0,18,288	0/0:21,0:16:9.01:0,9,107	0/0:22,0:15:6.02:0,6,90	0/0:27,0:27:45.13:0,45,657	0/0:21,0:21:48.16:0,48,751	0/0:14,0:14:27.05:0,27,370	0/0:36,0:36:33.11:0,33,481	0/0:18,0:18:45.15:0,45,718	0/0:13,0:13:27.09:0,27,410	0/0:34,0:34:81.27:0,81,1274	0/0:21,0:21:48.13:0,48,715	1/1:4,20:26:51.18:1225,51,0	1/1:9,17:26:33.11:784,33,0	0/0:25,0:25:54.18:0,54,845	0/0:20,0:20:39.13:0,39,624	0/0:20,0:20:36.12:0,36,562	0/0:10,0:10:12.04:0,12,181	0/0:14,0:15:18.05:0,18,268	0/0:34,0:34:72.24:0,72,1126	0/0:21,0:21:39.13:0,39,601	0/0:17,0:17:33.11:0,33,514	0/0:28,0:28:60.20:0,60,949	0/0:28,0:28:57.19:0,57,889	0/0:18,0:18:33.11:0,33,528	0/0:24,0:25:57.19:0,57,878	0/0:18,0:18:36.12:0,36,576	0/0:9,0:9:17.18:0,17,246
chr10	80515196	.	GA	G	5064.79	PASS	AB=0.905;AC=34;AF=0.607;AN=56;BaseQRankSum=4.142;DP=525;FS=1.344;HRun=11;HaplotypeScore=81.6231;InbreedingCoeff=0.8417;MQ=63.68;MQ0=10;MQRankSum=1.195;QD=14.27;ReadPosRankSum=1.885;VQSLOD=5.4186;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:16:20.01:0,20,105	1/1:1,6:7:20.01:153,20,0	0/0:20,0:13:17.31:0,17,148	0/1:24,1:10:5.06:5,0,26	1/1:4,25:29:62.88:517,63,0	0/1:18,4:22:1.17:1,0,400	0/0:18,1:20:29.24:0,29,487	1/1:11,14:19:9.92:284,10,0	0/0:13,0:13:36.09:0,36,383	1/1:8,21:28:59.90:493,60,0	1/1:4,12:16:32.96:271,33,0	0/0:18,0:18:32.26:0,32,370	0/0:4,1:16:19.98:0,20,102	0/0:9,0:19:15.67:0,16,94	1/1:5,11:16:29.96:246,30,0	1/1:6,13:19:6.95:263,7,0	1/1:7,24:31:39.44:534,39,0	1/1:2,12:15:26.01:203,26,0	1/1:5,10:12:29.96:246,30,0	1/1:2,21:23:32.46:462,32,0	1/1:0,3:4:11.03:80,11,0	0/0:12,0:12:33.08:0,33,345	0/0:15,0:15:21.05:0,21,223	0/0:17,0:17:51.13:0,51,544	1/1:3,12:15:2.27:216,2,0	1/1:5,18:24:49.95:400,50,0	1/1:5,25:30:68.90:567,69,0	1/1:2,7:8:14.97:123,15,0
chr10	80517074	.	A	AGGCC	26084.51	PASS	AB=0.556;AC=41;AF=0.732;AN=56;BaseQRankSum=-3.089;DP=582;FS=16.548;HRun=0;HaplotypeScore=105.4965;InbreedingCoeff=0.9173;MQ=69.72;MQ0=2;MQRankSum=-8.563;QD=57.84;ReadPosRankSum=2.703;VQSLOD=5.1592;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,40:44:93.15:2379,93,0	1/1:0,12:12:33.11:876,33,0	0/0:15,0:15:37.62:0,38,571	0/0:14,0:14:34.47:0,34,465	1/1:3,8:13:18.02:417,18,0	1/1:1,25:26:66.23:1745,66,0	1/1:2,19:22:66.23:1738,66,0	1/1:8,19:29:69.13:1636,69,0	0/0:19,0:19:57.17:0,57,1029	1/1:6,17:24:54.05:1361,54,0	1/1:1,22:26:57.20:1512,57,0	0/0:20,0:20:60.21:0,60,1112	1/1:2,21:23:54.19:1429,54,0	1/1:4,27:31:72.20:1855,72,0	1/1:5,19:24:57.20:1514,57,0	1/1:5,16:22:54.19:1428,54,0	1/1:3,21:24:62.43:1604,62,0	1/1:2,11:13:35.99:881,36,0	1/1:3,10:14:33.11:828,33,0	1/1:4,9:14:26.83:645,27,0	1/1:6,24:33:57.19:1450,57,0	0/0:24,0:24:63.20:0,63,1138	0/0:11,0:11:18.06:0,18,336	0/0:28,0:28:80.62:0,81,1431	1/1:5,6:12:21.07:558,21,0	1/1:5,13:19:42.01:983,42,0	1/1:5,12:17:45.15:1169,45,0	0/1:1,4:5:7.92:74,0,8
chr10	80520190	.	C	CA	9391.30	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=12.300;DP=469;FS=3.025;HRun=2;HaplotypeScore=63.1862;InbreedingCoeff=0.9515;MQ=53.07;MQ0=29;MQRankSum=-10.842;QD=29.35;ReadPosRankSum=0.032;VQSLOD=4.2705;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:7:18.06:285,18,0	1/1:0,5:5:9.03:143,9,0	0/0:21,0:17:39.17:0,39,659	0/0:16,0:16:42.13:0,42,565	1/1:1,28:24:45.15:696,45,0	1/1:1,20:17:30.10:462,30,0	1/1:1,4:4:9.03:143,9,0	1/1:1,2:3:6.01:73,6,0	0/0:21,0:21:54.18:0,54,748	1/1:0,10:8:24.08:379,24,0	1/1:1,26:23:42.14:666,42,0	0/0:19,0:19:48.16:0,48,670	1/1:0,16:12:27.09:419,27,0	1/1:0,14:8:18.06:269,18,0	1/1:0,15:11:30.10:460,30,0	1/1:0,19:10:27.09:414,27,0	1/1:0,11:10:21.07:334,21,0	1/1:0,8:8:15.05:237,15,0	1/1:0,10:9:24.08:379,24,0	1/1:1,30:26:63.21:999,63,0	1/1:0,7:6:18.06:287,18,0	0/0:38,0:38:99:0,108,1502	0/0:19,0:19:48.16:0,48,671	0/0:15,0:15:42.14:0,42,585	1/1:1,18:17:30.10:477,30,0	1/1:0,16:15:45.15:697,45,0	1/1:1,28:24:53.87:855,54,0	1/1:0,16:15:45.15:716,45,0
chr10	80520364	.	A	ATATAAGGC	20003.56	PASS	AC=40;AF=0.741;AN=54;BaseQRankSum=-6.694;DP=375;FS=14.012;HRun=0;HaplotypeScore=71.5086;InbreedingCoeff=0.9243;MQ=46.35;MQ0=10;MQRankSum=-12.621;QD=76.06;ReadPosRankSum=-0.712;VQSLOD=3.7014;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,4:9:17.64:544,18,0	1/1:2,4:6:9.03:397,9,0	0/0:15,0:13:39.13:0,39,1038	0/0:12,0:7:21.06:0,21,536	1/1:3,18:23:44.98:1596,45,0	1/1:7,8:15:42.14:1518,42,0	1/1:1,1:3:3.01:132,3,0	1/1:5,6:11:30.08:1143,30,0	0/0:15,0:15:42.12:0,42,1045	1/1:3,7:6:18.06:646,18,0	1/1:1,8:12:18.06:794,18,0	0/0:12,0:11:30.05:0,30,725	1/1:2,11:15:39.13:1568,39,0	1/1:6,10:13:30.10:1240,30,0	1/1:8,8:13:39.13:1239,39,0	1/1:3,12:17:39.13:1612,39,0	1/1:4,5:8:15.05:588,15,0	1/1:3,1:4:12.04:473,12,0	1/1:2,3:6:18.06:657,18,0	1/1:2,11:19:33.04:1234,33,0	./.	0/0:21,0:21:54.19:0,54,1490	0/0:21,0:21:57.19:0,57,1465	0/0:15,0:14:36.12:0,36,1019	1/1:1,9:11:24.08:1060,24,0	1/1:5,12:18:42.14:1657,42,0	1/1:10,11:18:39.13:1639,39,0	1/1:0,2:2:6.02:265,6,0
chr10	80520369	.	A	AG	83.62	PASS	AB=0.833;AC=2;AF=0.037;AN=54;BaseQRankSum=1.701;DP=355;FS=1.534;HRun=1;HaplotypeScore=91.6278;InbreedingCoeff=0.2595;MQ=44.38;MQ0=27;MQRankSum=-1.396;QD=3.80;ReadPosRankSum=-1.007;VQSLOD=-0.1728;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:5,5:9:2.66:157,0,3	0/0:5,0:3:5.89:0,6,17	0/0:15,0:13:39.13:0,39,501	0/0:9,0:7:21.07:0,21,273	0/0:22,0:17:16.95:0,17,111	0/0:17,0:16:38.03:0,38,298	0/0:3,0:2:2.37:0,2,8	0/0:13,0:9:24.12:0,24,198	0/0:14,0:13:36.12:0,36,467	0/0:13,0:6:18.76:0,19,144	0/0:10,0:6:11.12:0,11,32	0/0:12,0:10:24.08:0,24,312	0/0:14,0:14:33.36:0,33,190	0/0:17,0:13:27.80:0,28,167	0/0:18,0:14:37.48:0,37,325	0/0:16,0:14:33.02:0,33,183	0/0:8,0:5:13.02:0,13,93	0/0:6,0:5:11.52:0,12,126	0/0:10,0:9:25.64:0,26,247	0/1:12,0:10:0.69:1,0,37	./.	0/0:21,0:20:57.19:0,57,739	0/0:21,0:19:54.18:0,54,701	0/0:16,0:15:36.12:0,36,467	0/0:10,0:8:16.97:0,17,53	0/0:17,0:15:34.02:0,34,181	0/0:22,0:15:29.37:0,29,148	0/0:2,0:2:4.26:0,4,13
chr10	80520918	.	ATAT	A	161.52	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=2.288;DP=576;FS=1.681;HRun=0;HaplotypeScore=62.5648;InbreedingCoeff=0.6672;MQ=41.81;MQ0=40;MQRankSum=-0.597;QD=7.69;ReadPosRankSum=-0.654;VQSLOD=2.5629;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:12:9.03:0,9,191	0/0:17,0:17:39.13:0,39,845	./.	0/0:7,0:3:9.03:0,9,156	0/0:31,0:28:33.11:0,33,726	1/1:1,20:14:15.05:249,15,0	./.	0/0:33,0:15:39.10:0,39,820	0/0:18,0:18:33.11:0,33,729	0/0:22,0:17:39.13:0,39,837	0/0:29,0:24:39.13:0,39,859	0/0:13,0:13:12.02:0,12,208	0/0:19,0:19:15:0,15,290	0/0:20,0:18:27.09:0,27,580	0/0:31,0:30:21.04:0,21,409	0/0:18,0:18:21.07:0,21,470	0/0:38,0:34:24.05:0,24,495	0/0:19,0:11:15.05:0,15,339	0/0:25,0:10:30.07:0,30,600	0/0:32,0:24:53.81:0,54,1198	0/0:18,0:16:12.04:0,12,269	0/0:19,0:16:12.04:0,12,252	0/0:15,0:15:24.08:0,24,521	0/0:19,0:19:21.07:0,21,427	0/0:16,0:16:14.88:0,15,323	0/0:22,0:20:57.20:0,57,1271	0/0:38,0:31:42.14:0,42,920	0/0:7,0:5:3.01:0,3,68
chr10	80521481	.	A	ATT	5443.56	PASS	AB=0.750;AC=41;AF=0.732;AN=56;BaseQRankSum=9.592;DP=598;FS=5.181;HRun=8;HaplotypeScore=85.6439;InbreedingCoeff=0.8703;MQ=51.36;MQ0=31;MQRankSum=-2.227;QD=12.72;ReadPosRankSum=0.100;VQSLOD=2.0127;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:30:37.43:129,37,0	1/1:2,15:12:15.52:239,16,0	0/0:20,0:6:5.21:0,5,40	0/0:22,0:10:16.25:0,16,154	1/1:6,15:17:26.87:398,27,0	1/1:2,0:28:39.93:138,40,0	1/1:4,0:18:19.96:69,20,0	0/1:6,0:1:0:0,0,0	0/0:17,0:17:39.09:0,39,435	1/1:6,23:23:48.10:677,48,0	1/1:3,20:17:27.09:428,27,0	0/0:32,0:32:62.56:0,63,701	1/1:3,1:30:40.44:176,40,0	1/1:5,0:29:34.72:120,35,0	1/1:4,25:19:21.07:333,21,0	1/1:2,14:11:18.06:286,18,0	1/1:1,11:9:24.08:381,24,0	1/1:2,4:4:6.02:76,6,0	1/1:6,2:2:6.02:95,6,0	1/1:6,19:17:30.57:453,31,0	1/1:1,4:4:3.01:48,3,0	0/0:17,0:18:30.07:0,30,334	0/0:33,0:33:72.18:0,72,801	0/0:24,0:24:63.17:0,63,702	1/1:4,27:23:33.11:512,33,0	1/1:5,12:11:24.07:358,24,0	1/1:5,11:11:12.04:190,12,0	1/1:4,12:15:22.89:338,23,0
chr10	80523043	.	G	GA	13100.18	PASS	AC=36;AF=0.720;AN=50;BaseQRankSum=-10.703;DP=568;FS=15.013;HRun=5;HaplotypeScore=68.2946;InbreedingCoeff=0.9964;MQ=82.30;MQ0=0;MQRankSum=-6.860;QD=32.67;ReadPosRankSum=1.164;VQSLOD=3.9170;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,11:13:26.92:355,27,0	0/0:29,0:26:66.15:0,66,700	0/0:27,0:25:25.27:0,25,551	1/1:1,12:13:33.11:434,33,0	1/1:1,21:22:54.13:691,54,0	1/1:4,18:22:54.18:710,54,0	1/1:4,30:34:90.26:1140,90,0	0/0:20,0:20:39.09:0,39,419	1/1:1,15:16:45.14:577,45,0	1/1:0,18:18:45.15:592,45,0	0/0:24,0:24:60.15:0,60,645	./.	./.	1/1:2,29:31:75.24:987,75,0	1/1:0,22:22:60.15:770,60,0	1/1:3,20:23:48.16:631,48,0	1/1:0,31:31:81.26:1066,81,0	1/1:1,5:6:15.05:197,15,0	1/1:4,21:25:60.20:789,60,0	1/1:2,24:26:69.22:903,69,0	0/0:17,0:17:42.09:0,42,444	0/0:21,0:21:57.12:0,57,604	0/0:29,0:28:78.20:0,78,838	1/1:0,20:20:42.13:553,42,0	1/1:2,29:31:87.27:1129,87,0	1/1:0,28:28:75.24:987,75,0	1/1:1,18:19:45.15:590,45,0
chr10	80528073	.	CT	C	9428.36	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=9.064;DP=507;FS=24.498;HRun=9;HaplotypeScore=69.0570;InbreedingCoeff=0.9932;MQ=68.31;MQ0=0;MQRankSum=-2.187;QD=22.50;ReadPosRankSum=2.025;VQSLOD=3.5936;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:23:57.02:522,57,0	1/1:1,7:8:21.01:192,21,0	0/0:18,0:17:33.98:0,34,374	0/0:11,0:10:20.39:0,20,225	1/1:3,18:21:51.02:467,51,0	1/1:0,21:21:60.03:549,60,0	1/1:3,6:9:15:137,15,0	1/1:9,21:30:62.94:561,63,0	0/0:6,0:6:18.02:0,18,194	1/1:6,20:26:60.02:549,60,0	1/1:2,16:18:48.02:439,48,0	0/0:14,0:14:42.07:0,42,469	1/1:2,14:16:35.99:329,36,0	1/1:1,12:13:33.02:302,33,0	1/1:0,13:13:36.02:330,36,0	1/1:0,15:15:42.02:384,42,0	1/1:0,26:26:75.04:686,75,0	1/1:1,17:18:51:460,51,0	1/1:5,12:17:36.01:329,36,0	1/1:2,22:24:62.06:555,62,0	1/1:3,8:11:24.01:220,24,0	0/0:10,0:10:27.08:0,27,312	0/0:16,0:16:42.12:0,42,484	0/0:13,0:13:39.10:0,39,439	1/1:4,33:37:90.04:824,90,0	1/1:1,24:25:69.02:632,69,0	1/1:3,24:27:66.02:604,66,0	1/1:7,14:21:39.02:357,39,0
chr10	80529776	.	CATCTGGATTGTTTTCAGCTTCTGCCT	C	36285.54	PASS	AB=0.714;AC=31;AF=0.554;AN=56;BaseQRankSum=18.198;DP=664;FS=10.172;HRun=0;HaplotypeScore=446.4259;InbreedingCoeff=0.9012;MQ=52.32;MQ0=5;MQRankSum=-14.837;QD=115.19;ReadPosRankSum=6.040;VQSLOD=3.7395;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:99:0,108,11698	1/1:1,7:8:18.06:1264,18,0	0/0:17,0:12:33.11:0,33,2713	0/0:27,0:21:60.21:0,60,4640	1/1:5,18:23:45.15:2752,45,0	0/0:28,0:28:84.29:0,84,8744	0/0:27,0:27:75.26:0,75,8057	1/1:14,5:18:15.04:708,15,0	0/0:31,0:31:93.32:0,93,9820	1/1:11,19:30:54.17:3608,54,0	1/1:5,11:16:29.44:1845,29,0	0/0:27,0:27:75.25:0,75,7939	0/0:45,0:45:99:0,126,14034	0/0:25,0:25:72.25:0,72,8222	1/1:5,20:25:57.20:4003,57,0	1/1:7,26:33:66.23:4634,66,0	0/1:9,6:15:99:1191,0,152	1/1:7,6:13:15.02:865,15,0	1/1:6,8:12:24.08:1475,24,0	1/1:6,18:24:39.13:2425,39,0	1/1:6,7:13:4.25:418,4,0	0/0:28,0:28:81.28:0,81,8515	0/0:25,0:25:75.24:0,75,7913	0/0:26,0:26:75.24:0,75,7799	1/1:1,20:21:45.15:3137,45,0	1/1:5,15:20:45.15:2908,45,0	1/1:10,20:28:54.19:3791,54,0	1/1:4,7:11:18.06:1264,18,0
chr10	80531471	.	TTGTG	T	5999.87	PASS	AB=0.600;AC=41;AF=0.732;AN=56;BaseQRankSum=6.074;DP=551;FS=5.281;HRun=0;HaplotypeScore=92.9743;InbreedingCoeff=0.7578;MQ=50.44;MQ0=27;MQRankSum=-0.132;QD=16.71;ReadPosRankSum=1.949;VQSLOD=4.2699;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:11:3:28,3,0	1/1:4,6:11:12.03:171,12,0	0/0:60,0:6:3.01:0,3,35	0/0:60,0:11:2.90:0,3,16	1/1:6,13:21:39.12:580,39,0	1/1:6,0:23:33.04:307,33,0	1/1:7,0:12:9.01:84,9,0	1/1:17,7:23:18.03:238,18,0	0/0:10,0:11:14.77:0,15,252	1/1:13,7:20:24.08:375,24,0	1/1:11,8:19:15.01:209,15,0	0/0:15,0:15:24.08:0,24,542	1/1:6,0:18:18.02:168,18,0	1/1:2,0:8:6.01:56,6,0	1/1:9,7:16:12.04:190,12,0	1/1:7,11:19:21.06:314,21,0	1/1:7,8:15:12.04:191,12,0	1/1:3,11:13:24.08:381,24,0	1/1:9,8:15:21.02:328,21,0	1/1:7,9:15:18.02:258,18,0	1/1:16,11:25:42.14:650,42,0	0/0:15,0:15:15.05:0,15,355	0/0:20,0:20:38.66:0,39,824	0/0:11,0:11:24.08:0,24,568	0/1:5,10:15:12.80:309,0,13	1/1:8,12:20:20.14:426,20,0	1/1:9,17:27:35.69:548,36,0	1/1:0,5:5:12.04:191,12,0
chr10	80531835	.	C	CA	279.87	PASS	AB=0.514;AC=34;AF=0.850;AN=40;BaseQRankSum=-3.244;DP=54;FS=0.000;HRun=0;HaplotypeScore=82.3090;InbreedingCoeff=0.1486;MQ=42.17;MQ0=1;MQRankSum=2.030;QD=5.95;ReadPosRankSum=-2.544;VQSLOD=2.6692;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:0,3:3:0:0,0,0	./.	./.	./.	./.	1/1:1,1:2:4.83:18,5,0	1/1:2,0:2:6:51,6,0	1/1:2,0:2:5.94:42,6,0	1/1:1,0:1:2.84:14,3,0	1/1:0,1:1:1.25:3,1,0	1/1:1,0:1:2.99:23,3,0	./.	0/1:1,4:5:8.80:12,0,9	0/0:1,3:4:0.04:0,0,3	1/1:0,4:4:0.47:2,0,0	1/1:1,1:2:0.19:20,0,0	1/1:1,1:2:2.97:20,3,0	1/1:0,1:1:2.68:11,3,0	./.	1/1:1,1:2:5.52:25,6,0	1/1:2,0:2:2.99:24,3,0	0/1:0,1:1:0:0,0,0	0/1:0,2:2:0.20:0,0,0	1/1:2,2:4:2.97:20,3,0	1/1:1,1:2:2.99:23,3,0	./.	1/1:3,5:8:10.98:52,11,0	./.
chr10	80532395	.	CA	C	1017.77	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=7.373;DP=320;FS=0.682;HRun=5;HaplotypeScore=31.3533;InbreedingCoeff=0.8778;MQ=62.54;MQ0=0;MQRankSum=-0.688;QD=26.78;ReadPosRankSum=-0.113;VQSLOD=2.3494;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:45.13:510,45,0	0/0:3,0:3:6.02:0,6,82	0/0:3,0:3:8.04:0,8,71	./.	0/0:15,0:15:42.13:0,42,557	0/0:16,0:16:45.15:0,45,616	0/0:4,0:4:12.04:0,12,164	0/0:32,0:32:81.25:0,81,1080	0/0:15,0:15:45.15:0,45,613	0/0:14,0:14:39.13:0,39,531	0/0:10,0:10:30.10:0,30,401	0/0:10,0:10:27.09:0,27,369	1/1:1,14:15:42.12:476,42,0	1/1:0,5:5:15.04:170,15,0	0/0:9,0:9:27.09:0,27,369	0/0:18,0:18:51.17:0,51,695	0/0:11,0:11:33.11:0,33,451	0/0:19,0:19:51.15:0,51,680	0/0:8,0:8:24.06:0,24,298	0/0:11,0:11:27.09:0,27,369	0/0:8,0:8:21.07:0,21,287	0/0:3,0:3:9.03:0,9,120	0/0:6,0:6:18.06:0,18,246	0/0:5,0:5:15.05:0,15,205	0/0:3,0:3:9.03:0,9,123	0/0:13,0:12:36.12:0,36,493	0/0:23,0:23:69.22:0,69,928	0/0:23,0:23:69.23:0,69,941
chr10	80532644	.	CATATATATAT	C	138.96	PASS	AC=8;AF=0.571;AN=14;BaseQRankSum=0.000;DP=101;FS=0.000;HRun=0;HaplotypeScore=30.0859;MQ=83.28;MQ0=2;MQRankSum=-0.720;QD=4.96;ReadPosRankSum=0.000;VQSLOD=1.0050;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:6,0:3:0.89:0,1,2	./.	./.	./.	1/1:2,0:2:1.25:3,1,0	1/1:13,0:13:3.01:52,3,0	./.	0/0:2,0:2:3:0,3,27	./.	./.	./.	./.	./.	./.	./.	./.	0/0:3,0:3:0:0,0,0	./.	./.	./.	./.	./.	1/1:5,0:6:3.01:68,3,0	./.	./.	1/1:7,0:7:3.01:89,3,0
chr10	80532852	.	GA	G	15877.94	PASS	AC=54;AF=0.964;AN=56;BaseQRankSum=-1.732;DP=449;FS=0.000;HRun=2;HaplotypeScore=44.4291;InbreedingCoeff=0.6789;MQ=64.46;MQ0=0;MQRankSum=-1.715;QD=35.52;ReadPosRankSum=1.681;VQSLOD=4.8512;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:48.16:619,48,0	1/1:0,6:6:15.05:195,15,0	1/1:0,2:2:6:63,6,0	0/0:2,0:2:2.98:0,3,21	1/1:0,12:12:30.10:386,30,0	1/1:0,21:21:54.18:701,54,0	1/1:0,9:9:27.09:351,27,0	1/1:1,45:46:99:1707,135,0	1/1:0,19:19:48.16:623,48,0	1/1:0,20:20:57.19:739,57,0	1/1:0,16:16:42.14:545,42,0	1/1:0,13:13:30.10:390,30,0	1/1:0,26:26:75.24:974,75,0	1/1:0,26:26:69.22:896,69,0	1/1:0,24:24:69.22:896,69,0	1/1:0,22:22:57.19:740,57,0	1/1:1,11:12:30.10:389,30,0	1/1:0,6:6:18.06:234,18,0	1/1:0,19:19:57.19:740,57,0	1/1:0,11:11:33.11:428,33,0	1/1:0,21:21:63.20:818,63,0	1/1:0,9:9:24.08:312,24,0	1/1:0,11:11:30.03:389,30,0	1/1:0,12:12:36.12:464,36,0	1/1:0,12:12:33.11:429,33,0	1/1:0,22:22:63.20:818,63,0	1/1:1,20:21:57.14:721,57,0	1/1:0,11:11:24.08:312,24,0
chr10	80533267	.	T	TAA	24989.08	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-7.038;DP=629;FS=5.451;HRun=1;HaplotypeScore=73.7977;InbreedingCoeff=0.9729;MQ=81.36;MQ0=1;MQRankSum=-4.912;QD=51.63;ReadPosRankSum=2.157;VQSLOD=4.7125;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:17:39.13:754,39,0	1/1:2,15:17:39.13:753,39,0	0/0:23,0:23:57.18:0,57,815	0/0:11,0:11:30.09:0,30,406	1/1:1,43:44:99:2375,129,0	1/1:1,29:30:78.22:1469,78,0	1/1:1,7:9:18.06:348,18,0	1/1:2,24:26:72.25:1359,72,0	0/0:14,0:14:42.14:0,42,642	1/1:1,42:43:99:2428,129,0	1/1:0,41:41:99:2244,117,0	0/0:20,0:20:60.20:0,60,919	1/1:2,23:25:72.20:1322,72,0	1/1:0,22:22:54.19:1041,54,0	1/1:0,21:22:63.22:1217,63,0	1/1:1,18:19:8.25:940,8,0	1/1:0,6:6:18.06:348,18,0	1/1:0,3:3:9.03:174,9,0	1/1:2,18:20:60.15:1048,60,0	1/1:1,33:34:99:1905,102,0	1/1:0,19:19:48.16:927,48,0	0/0:24,0:24:66.21:0,66,986	0/0:33,0:33:99:0,99,1493	0/0:20,0:20:60.16:0,60,892	1/1:1,27:28:75.21:1411,75,0	1/1:0,18:19:57.17:1029,57,0	1/1:5,28:33:84.23:1549,84,0	1/1:0,6:6:18.06:348,18,0
chr10	80534737	.	G	GCA	6361.59	PASS	AB=0.729;AC=30;AF=0.536;AN=56;BaseQRankSum=-5.367;DP=609;FS=0.944;HRun=0;HaplotypeScore=93.7333;InbreedingCoeff=0.0401;MQ=62.66;MQ0=8;MQRankSum=-1.734;QD=13.45;ReadPosRankSum=-2.014;VQSLOD=4.1491;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,1:32:11.65:85,12,0	1/1:2,5:8:12.04:184,12,0	0/1:19,0:7:0:0,0,0	0/0:21,0:10:2.92:0,3,17	1/1:5,14:21:24.98:537,25,0	0/1:11,14:25:72.53:417,0,73	0/1:13,8:20:15.69:197,0,16	0/1:23,0:23:18.73:105,0,19	0/0:18,0:23:56.28:0,56,529	0/1:11,9:21:55.93:392,0,56	0/1:10,8:18:6.87:126,0,7	0/0:26,0:28:56.24:0,56,604	1/1:8,0:21:31.27:254,31,0	1/1:13,1:27:25.54:245,26,0	0/1:14,18:32:16.64:637,0,17	0/1:8,10:17:12.85:255,0,13	1/1:10,10:22:19.40:395,19,0	0/1:8,5:14:24.19:219,0,24	0/1:16,3:19:18.96:139,0,19	1/1:9,13:22:33.11:485,33,0	0/1:21,19:41:99:355,0,141	0/0:20,0:20:36.10:0,36,407	0/0:21,0:21:44.79:0,45,482	0/0:20,0:22:38.77:0,39,400	1/1:6,14:21:9.33:521,9,0	0/1:9,9:18:31.74:409,0,32	0/1:9,7:17:4.25:230,0,4	0/1:2,7:8:13.33:176,0,13
chr10	80536157	.	GAC	G	418.15	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.734;DP=658;FS=1.816;HRun=0;HaplotypeScore=106.3220;InbreedingCoeff=0.8745;MQ=55.81;MQ0=11;MQRankSum=-1.165;QD=7.09;ReadPosRankSum=0.631;VQSLOD=3.3324;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:14.91:113,15,0	0/0:11,0:11:33.03:0,33,528	0/0:17,0:5:7.88:0,8,100	0/0:30,0:11:12.44:0,12,176	0/0:24,0:24:32.12:0,32,732	0/0:22,0:22:25.11:0,25,477	0/0:20,0:19:24.01:0,24,329	0/0:33,0:26:74.90:0,75,927	0/0:22,0:22:54.66:0,55,1029	0/0:31,0:30:83.98:0,84,1181	0/0:27,0:26:28.95:0,29,752	0/0:25,0:25:60.05:0,60,1042	1/1:15,4:19:5.45:161,5,0	1/1:21,4:25:27.06:276,27,0	0/0:19,0:19:53.97:0,54,690	0/0:15,0:15:42.12:0,42,708	0/0:30,0:30:37.93:0,38,903	0/0:14,0:14:19.13:0,19,414	0/0:23,0:21:41.42:0,41,531	0/0:36,1:37:37.54:0,38,1252	0/0:33,0:33:96.10:0,96,1315	0/0:31,0:31:61.75:0,62,1171	0/0:25,1:26:53.78:0,54,860	0/0:24,0:24:17.16:0,17,723	0/0:23,0:23:63.01:0,63,880	0/0:28,0:28:65.90:0,66,1152	0/0:31,0:30:37.09:0,37,974	0/0:3,0:3:6.02:0,6,106
chr10	80536163	.	GAC	G	434.13	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.233;DP=652;FS=2.369;HRun=0;HaplotypeScore=104.8225;InbreedingCoeff=0.8760;MQ=54.71;MQ0=17;MQRankSum=0.776;QD=7.75;ReadPosRankSum=-0.067;VQSLOD=3.0974;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:17.90:137,18,0	0/0:10,0:10:30.10:0,30,545	0/0:17,1:4:9.92:0,10,173	0/0:30,0:8:8.38:0,8,85	0/0:27,0:27:57.07:0,57,1043	0/0:20,0:20:35.90:0,36,451	0/0:18,0:17:18.04:0,18,256	0/0:35,0:27:80.68:0,81,1364	0/0:21,0:21:63.22:0,63,1205	0/0:26,0:25:75.25:0,75,1400	0/0:28,0:27:63.17:0,63,1041	0/0:26,0:26:75.26:0,75,1415	1/1:16,3:19:5.42:157,5,0	1/1:19,3:22:26.32:273,26,0	0/0:18,0:18:54.11:0,54,966	0/0:14,0:14:39.12:0,39,713	0/0:33,0:33:62.03:0,62,1186	0/0:14,0:14:22.72:0,23,564	0/0:24,0:21:57.14:0,57,988	0/0:36,0:36:85.54:0,86,1669	0/0:33,0:33:99:0,99,1780	0/0:30,0:30:65.11:0,65,1342	0/0:23,0:23:60.17:0,60,1043	0/0:27,0:28:56.86:0,57,1110	0/0:23,0:23:60.21:0,60,1138	0/0:28,0:28:83.84:0,84,1456	0/0:30,0:29:85.23:0,85,1443	0/0:3,0:3:5.99:0,6,80
chr10	80536171	.	CAG	C	387.44	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=6.747;DP=663;FS=1.782;HRun=0;HaplotypeScore=107.6454;InbreedingCoeff=0.6769;MQ=54.56;MQ0=21;MQRankSum=-0.516;QD=6.57;ReadPosRankSum=-0.363;VQSLOD=2.8854;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:14.12:0,14,229	0/0:10,0:10:27.08:0,27,446	0/0:23,0:8:10.70:0,11,123	0/0:36,0:8:5.76:0,6,69	0/0:28,0:28:66.21:0,66,1100	1/1:3,18:21:26.30:337,26,0	1/1:2,17:18:12.03:165,12,0	0/0:34,0:26:60.07:0,60,989	0/0:21,0:21:63.22:0,63,1083	0/0:28,0:27:66.22:0,66,1143	0/0:26,0:25:54.18:0,54,905	0/0:24,0:24:60.20:0,60,1041	0/0:20,0:20:5.54:0,6,296	0/1:19,0:19:5.70:6,0,247	0/0:19,0:19:57.19:0,57,989	0/0:14,0:14:36.12:0,36,638	0/0:32,0:32:78.19:0,78,1157	0/0:14,0:14:33.01:0,33,453	0/0:22,0:19:54.17:0,54,870	0/0:40,0:40:88.67:0,89,1500	0/0:34,0:34:96.28:0,96,1628	0/0:27,0:27:66.16:0,66,1097	0/0:22,0:22:51.16:0,51,863	0/0:29,0:29:59.93:0,60,1151	0/0:24,0:24:63.17:0,63,1015	0/0:28,0:28:75.26:0,75,1304	0/0:28,0:27:81.26:0,81,1385	0/0:3,0:2:6.02:0,6,90
chr10	80536244	.	CAGACAGACAGAAAGAA	C	2448.04	PASS	AB=0.931;AC=7;AF=0.130;AN=54;BaseQRankSum=8.157;DP=674;FS=1.281;HRun=0;HaplotypeScore=265.5431;InbreedingCoeff=0.4801;MQ=55.71;MQ0=6;MQRankSum=-4.611;QD=28.47;ReadPosRankSum=-2.001;VQSLOD=1.8390;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,1:14:24:402,24,0	0/0:13,0:13:39.13:0,39,1761	0/0:26,0:4:2.33:0,2,10	./.	0/0:42,0:42:99:0,123,5359	0/1:23,0:23:21.21:21,0,522	0/1:13,0:13:99:188,0,241	0/0:39,0:33:90.22:0,90,1499	0/0:24,0:24:72.23:0,72,3265	0/0:26,0:26:78.25:0,78,3682	0/0:27,0:27:78.27:0,78,4267	0/0:27,0:27:81.25:0,81,3556	1/1:1,15:17:21.07:705,21,0	0/1:14,5:19:18.75:1272,0,19	0/0:24,0:24:69.17:0,69,2401	0/0:16,0:16:45.15:0,45,3071	0/0:40,0:40:28.79:0,29,4941	0/0:13,0:13:35.03:0,35,1209	0/0:18,0:18:54.14:0,54,2003	0/0:35,0:35:99:0,99,4071	0/0:21,0:21:51.15:0,51,1165	0/0:26,0:26:78.25:0,78,3437	0/0:23,0:23:63.22:0,63,2986	0/0:32,0:32:86.02:0,86,3331	0/0:24,0:24:69.09:0,69,3143	0/0:29,0:29:84.27:0,84,4346	0/0:24,0:24:69.20:0,69,2417	0/0:7,0:7:21:0,21,1207
chr10	80536351	.	C	CAAAG	1643.78	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.321;DP=744;FS=0.000;HRun=0;HaplotypeScore=122.0173;InbreedingCoeff=0.9750;MQ=59.43;MQ0=4;MQRankSum=0.308;QD=23.48;ReadPosRankSum=2.902;VQSLOD=3.1023;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:26:24.07:618,24,0	0/0:14,0:14:36.12:0,36,634	0/0:23,0:17:40.61:0,41,546	0/0:17,0:12:10.11:0,10,376	0/0:41,0:41:99:0,102,1570	0/0:27,0:27:51.08:0,51,733	0/0:25,0:24:42.69:0,43,487	0/0:31,0:31:75.19:0,75,1152	0/0:28,0:28:72.22:0,72,1163	0/0:42,0:42:99:0,120,2020	0/0:28,0:27:78.09:0,78,1160	0/0:27,0:27:75.18:0,75,1173	1/1:0,21:21:20.79:544,21,0	1/1:0,22:23:24.08:624,24,0	0/0:24,0:24:63.20:0,63,1063	0/0:24,0:24:63.17:0,63,1015	0/0:37,0:37:73.92:0,74,1547	0/0:10,0:10:15.05:0,15,250	0/0:14,0:14:39.09:0,39,575	0/0:37,0:37:87.18:0,87,1318	0/0:16,0:16:40.63:0,41,671	0/0:33,0:33:90.24:0,90,1468	0/0:28,0:28:69.20:0,69,1138	0/0:27,0:27:72.22:0,72,1224	0/0:31,0:31:80.60:0,81,1284	0/0:30,0:30:78.24:0,78,1298	0/0:30,0:30:81.13:0,81,1254	0/0:29,0:29:76.97:0,77,1318
chr10	80540822	.	G	GA	1273.05	PASS	AB=0.944;AC=8;AF=0.143;AN=56;BaseQRankSum=-4.834;DP=470;FS=2.670;HRun=9;HaplotypeScore=52.4078;InbreedingCoeff=0.6527;MQ=73.71;MQ0=1;MQRankSum=0.934;QD=16.11;ReadPosRankSum=0.654;VQSLOD=3.6623;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:60.16:664,60,0	0/0:4,0:4:9:0,9,78	0/1:8,0:8:10.68:11,0,20	0/0:10,0:9:4:0,4,61	0/0:20,0:20:56.97:0,57,491	0/0:26,0:26:77.98:0,78,677	0/0:9,0:9:17.99:0,18,156	0/0:25,0:26:74:0,74,626	0/0:15,0:15:35.99:0,36,313	0/0:21,0:21:53.98:0,54,469	0/0:21,1:22:20.77:0,21,405	0/0:10,0:10:26.99:0,27,234	1/1:6,14:20:19.07:437,19,0	1/1:1,10:12:26.91:280,27,0	0/0:11,0:11:32.99:0,33,286	0/0:23,0:24:64.99:0,65,547	0/0:14,0:15:35.03:0,35,292	0/0:8,0:8:17.99:0,18,156	0/1:14,2:16:33.38:33,0,201	0/0:34,0:34:95.96:0,96,830	0/0:6,0:6:18:0,18,156	0/0:20,0:20:53.99:0,54,469	0/0:13,0:14:37.97:0,38,310	0/0:5,0:5:9:0,9,78	0/0:18,0:19:53.03:0,53,449	0/0:25,0:25:65.97:0,66,569	0/0:36,0:35:99:0,108,933	0/0:11,0:11:20.98:0,21,182
chr10	80540950	.	G	GAGTTA	2808.31	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.004;DP=519;FS=4.304;HRun=0;HaplotypeScore=91.8475;InbreedingCoeff=0.9449;MQ=79.59;MQ0=0;MQRankSum=-9.067;QD=68.50;ReadPosRankSum=-2.739;VQSLOD=4.1057;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.24:0,75,1455	0/0:11,0:11:27.09:0,27,544	0/0:19,0:19:30.12:0,30,751	0/0:13,0:13:36.12:0,36,696	0/0:25,0:25:72.25:0,72,1466	1/1:2,27:29:69.19:2003,69,0	1/1:1,11:12:30.10:926,30,0	0/0:33,0:33:87.28:0,87,1696	0/0:16,0:16:45.15:0,45,916	0/0:16,0:16:48.16:0,48,953	0/0:26,0:26:78.27:0,78,1628	0/0:13,0:13:39.12:0,39,771	0/0:10,0:10:30.10:0,30,589	0/0:18,0:18:51.17:0,51,1022	0/0:11,0:11:33.10:0,33,635	0/0:19,0:19:57.20:0,57,1178	0/0:10,0:10:30.06:0,30,587	0/0:7,0:7:21.07:0,21,395	0/0:19,0:19:54.18:0,54,1081	0/0:36,0:36:99:0,105,2135	0/0:17,0:17:48.16:0,48,983	0/0:23,0:23:66.23:0,66,1376	0/0:26,0:26:75.26:0,75,1549	0/0:17,0:17:51.18:0,51,1063	0/0:19,0:19:51.16:0,51,1006	0/0:19,0:19:51.17:0,51,1046	0/0:28,0:28:84.29:0,84,1732	0/0:2,0:2:6.02:0,6,126
chr10	80541815	.	TA	T	1030.59	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.019;DP=596;FS=3.231;HRun=3;HaplotypeScore=59.0783;InbreedingCoeff=0.9951;MQ=84.03;MQ0=0;MQRankSum=-1.537;QD=28.63;ReadPosRankSum=-0.317;VQSLOD=2.6740;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.21:0,78,1081	0/0:18,0:18:54.18:0,54,772	0/0:16,0:16:48.16:0,48,669	0/0:20,0:20:36.94:0,37,603	0/0:39,0:39:99:0,117,1679	1/1:1,24:25:63.20:780,63,0	1/1:1,10:11:30.09:372,30,0	0/0:30,0:30:87.29:0,87,1253	0/0:12,0:12:36.12:0,36,518	0/0:26,0:26:78.26:0,78,1123	0/0:27,0:27:78.25:0,78,1097	0/0:14,0:14:42.14:0,42,605	0/0:25,0:25:72.24:0,72,1037	0/0:15,0:15:45.15:0,45,647	0/0:16,0:16:48.16:0,48,691	0/0:23,0:23:69.23:0,69,992	0/0:7,0:7:21.07:0,21,298	0/0:20,0:20:60.20:0,60,859	0/0:19,0:19:54.17:0,54,763	0/0:33,0:33:99:0,99,1405	0/0:10,0:10:30.10:0,30,432	0/0:21,0:21:63.21:0,63,907	0/0:41,0:41:99:0,120,1706	0/0:12,0:12:36.12:0,36,518	0/0:15,0:15:45.13:0,45,628	0/0:28,0:28:81.27:0,81,1151	0/0:39,0:38:99:0,117,1684	0/0:8,0:8:21.07:0,21,302
chr10	80542168	.	AT	A	847.73	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.064;DP=468;FS=3.388;HRun=6;HaplotypeScore=50.3485;InbreedingCoeff=0.9411;MQ=86.07;MQ0=0;MQRankSum=-2.777;QD=25.69;ReadPosRankSum=0.800;VQSLOD=3.6162;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:36.09:0,36,443	0/0:3,0:3:6.02:0,6,79	0/0:13,0:13:24.07:0,24,298	0/0:17,0:17:24.61:0,25,434	0/0:18,0:18:48.13:0,48,603	1/1:0,26:26:72.18:774,72,0	1/1:0,7:7:18.05:193,18,0	0/0:37,0:37:99:0,99,1302	0/0:15,0:15:45.09:0,45,557	0/0:22,0:22:66.21:0,66,852	0/0:14,0:14:39.13:0,39,513	0/0:16,0:16:45.15:0,45,592	0/0:12,0:12:33.11:0,33,432	0/0:15,0:15:39.13:0,39,513	0/0:13,0:13:39.13:0,39,513	0/0:17,0:17:48.14:0,48,617	0/0:12,0:12:30.07:0,30,377	0/0:11,0:11:27.07:0,27,340	0/0:18,0:18:48.16:0,48,631	0/0:40,0:40:99:0,120,1578	0/0:13,0:13:30.08:0,30,379	0/0:17,0:17:51.17:0,51,671	0/0:25,0:25:72.23:0,72,947	0/0:12,0:12:36.12:0,36,473	0/0:16,0:16:42.14:0,42,552	0/0:15,0:15:42.14:0,42,553	0/0:20,0:20:57.19:0,57,749	0/0:12,0:12:36.12:0,36,474
chr10	80542284	.	AT	A	887.69	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.998;DP=532;FS=0.693;HRun=7;HaplotypeScore=51.1165;InbreedingCoeff=0.9890;MQ=80.00;MQ0=0;MQRankSum=-5.006;QD=23.99;ReadPosRankSum=-0.876;VQSLOD=3.3348;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.17:0,54,679	0/0:8,0:8:21.07:0,21,264	0/0:13,1:14:35.57:0,36,361	0/0:18,0:18:42.13:0,42,506	0/0:31,0:31:87.26:0,87,1080	1/1:1,26:27:69.15:703,69,0	1/1:0,10:10:30.07:306,30,0	0/0:34,0:34:90.28:0,90,1121	0/0:18,0:18:54.17:0,54,679	0/0:23,0:23:69.21:0,69,853	0/0:21,0:21:57.18:0,57,717	0/0:12,0:12:30.10:0,30,377	0/0:17,0:17:42.11:0,42,511	0/0:16,0:16:39.11:0,39,477	0/0:23,0:23:69.22:0,69,868	0/0:14,0:14:39.12:0,39,491	0/0:22,0:22:63.17:0,63,776	0/0:14,0:14:39.12:0,39,491	0/0:19,0:19:39.12:0,39,491	0/0:26,0:26:75.23:0,75,930	0/0:14,0:14:39.12:0,39,491	0/0:23,0:23:63.19:0,63,781	0/0:20,0:20:54.17:0,54,679	0/0:15,0:15:39.12:0,39,488	0/0:23,0:23:63.20:0,63,793	0/0:19,0:19:48.14:0,48,590	0/0:23,0:23:60.16:0,60,717	0/0:7,0:7:15.03:0,15,174
chr10	80542423	.	A	AGCTTC	2924.64	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.374;DP=575;FS=8.082;HRun=0;HaplotypeScore=101.3679;InbreedingCoeff=0.9911;MQ=85.44;MQ0=0;MQRankSum=-8.515;QD=66.47;ReadPosRankSum=-0.627;VQSLOD=4.3635;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.23:0,75,1565	0/0:15,0:15:45.13:0,45,900	0/0:17,0:17:51.15:0,51,1024	0/0:23,0:22:50.80:0,51,1122	0/0:19,0:19:54.14:0,54,1050	1/1:4,19:27:57.19:1723,57,0	1/1:3,12:17:42.14:1323,42,0	0/0:31,0:31:93.30:0,93,1989	0/0:23,0:23:69.23:0,69,1496	0/0:33,0:33:93.32:0,93,2072	0/0:28,0:28:84.25:0,84,1746	0/0:11,0:11:33.10:0,33,691	0/0:22,0:22:63.19:0,63,1321	0/0:26,0:26:69.24:0,69,1531	0/0:20,0:20:60.19:0,60,1292	0/0:10,0:10:30.09:0,30,626	0/0:11,0:11:30.06:0,30,581	0/0:6,0:6:18.03:0,18,355	0/0:21,0:21:63.17:0,63,1237	0/0:30,0:30:90.30:0,90,1944	0/0:23,0:23:66.21:0,66,1426	0/0:19,0:19:57.20:0,57,1269	0/0:25,0:25:72.23:0,72,1540	0/0:16,0:16:48.12:0,48,1005	0/0:19,0:19:51.18:0,51,1117	0/0:22,0:22:63.22:0,63,1396	0/0:29,0:28:84.29:0,84,1871	0/0:6,0:6:18.06:0,18,401
chr10	80542727	.	CAG	C	2377.23	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.980;DP=584;FS=0.000;HRun=0;HaplotypeScore=81.0594;InbreedingCoeff=0.9959;MQ=80.83;MQ0=0;MQRankSum=-5.366;QD=31.28;ReadPosRankSum=2.449;VQSLOD=5.2186;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,37:43:96.32:1344,96,0	0/0:9,0:9:27.09:0,27,486	0/0:16,0:15:33.11:0,33,548	0/0:19,0:19:42.12:0,42,666	0/0:21,0:21:60.21:0,60,1081	0/0:23,0:23:69.24:0,69,1226	0/0:20,0:20:54.19:0,54,973	0/0:35,0:35:99:0,99,1767	0/0:15,0:15:42.14:0,42,743	0/0:23,0:23:63.21:0,63,1091	0/0:18,0:18:48.16:0,48,864	0/0:16,0:16:48.16:0,48,864	1/1:2,15:17:45.15:630,45,0	1/1:2,14:16:39.13:546,39,0	0/0:24,0:24:72.23:0,72,1267	0/0:15,0:15:42.14:0,42,749	0/0:37,0:37:99:0,108,1888	0/0:7,0:7:18.06:0,18,324	0/0:22,0:22:66.21:0,66,1141	0/0:27,0:27:81.28:0,81,1428	0/0:39,0:39:99:0,117,2093	0/0:17,0:17:45.15:0,45,797	0/0:24,0:24:66.23:0,66,1187	0/0:18,0:18:54.19:0,54,972	0/0:16,0:16:45.14:0,45,744	0/0:20,0:20:60.21:0,60,1081	0/0:19,0:18:57.20:0,57,1026	0/0:8,0:8:24.08:0,24,432
chr10	80542745	.	A	AG	1602.08	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.618;DP=566;FS=0.000;HRun=4;HaplotypeScore=68.2649;InbreedingCoeff=0.9923;MQ=75.69;MQ0=0;MQRankSum=0.763;QD=34.09;ReadPosRankSum=0.434;VQSLOD=4.0818;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,108,1212	0/0:12,0:12:36.09:0,36,398	0/0:13,0:12:21.02:0,21,214	0/0:12,0:12:20.10:0,20,231	0/0:20,0:20:57.15:0,57,638	1/1:3,23:26:69.23:944,69,0	1/1:0,21:21:57.19:780,57,0	0/0:39,0:39:99:0,105,1157	0/0:9,0:9:27.07:0,27,298	0/0:21,0:21:57.15:0,57,631	0/0:14,0:14:39.10:0,39,434	0/0:14,0:14:42.12:0,42,476	0/0:17,0:17:51.05:0,51,539	0/0:14,0:14:39.03:0,39,414	0/0:23,0:23:60.16:0,60,671	0/0:16,0:16:45.12:0,45,502	0/0:33,0:33:96.27:0,96,1088	0/0:7,0:7:21.06:0,21,238	0/0:25,0:25:72.20:0,72,816	0/0:30,0:30:84.18:0,84,928	0/0:40,0:40:99:0,111,1259	0/0:12,0:12:33.07:0,33,359	0/0:27,0:27:72.20:0,72,816	0/0:18,0:18:45.09:0,45,496	0/0:12,0:12:36.10:0,36,408	0/0:20,0:20:60.16:0,60,670	0/0:15,0:15:39.11:0,39,442	0/0:13,0:13:39.11:0,39,442
chr10	80543132	.	C	CGG	1760.51	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.351;DP=703;FS=0.000;HRun=1;HaplotypeScore=88.3358;InbreedingCoeff=0.9999;MQ=85.06;MQ0=0;MQRankSum=-3.058;QD=42.94;ReadPosRankSum=-1.056;VQSLOD=3.3202;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1538	0/0:17,0:17:51.16:0,51,760	0/0:28,0:28:78.26:0,78,1181	0/0:16,0:16:45.12:0,45,636	0/0:31,0:31:93.30:0,93,1403	1/1:2,20:22:66.22:1050,66,0	1/1:4,15:19:51.17:832,51,0	0/0:22,0:21:66.21:0,66,972	0/0:35,0:35:99:0,105,1606	0/0:29,0:29:87.28:0,87,1308	0/0:22,0:22:60.20:0,60,918	0/0:28,0:28:81.26:0,81,1219	0/0:28,0:28:81.28:0,81,1239	0/0:28,0:28:81.27:0,81,1239	0/0:31,0:31:81.27:0,81,1240	0/0:22,0:22:60.20:0,60,919	0/0:20,0:20:60.20:0,60,912	0/0:13,0:13:36.12:0,36,551	0/0:23,0:23:69.23:0,69,1056	0/0:33,0:33:90.30:0,90,1378	0/0:25,0:25:72.23:0,72,1081	0/0:17,0:17:48.16:0,48,734	0/0:31,0:31:93.27:0,93,1397	0/0:25,0:25:72.24:0,72,1102	0/0:29,0:29:84.29:0,84,1286	0/0:24,0:24:72.24:0,72,1102	0/0:26,0:26:75.25:0,75,1148	0/0:24,0:24:72.24:0,72,1102
chr10	80543134	.	AT	A	1013.35	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.447;DP=720;FS=2.930;HRun=3;HaplotypeScore=78.1567;InbreedingCoeff=1.0000;MQ=85.53;MQ0=0;MQRankSum=-3.522;QD=23.57;ReadPosRankSum=-1.143;VQSLOD=2.7028;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1453	0/0:17,0:17:51.17:0,51,732	0/0:30,0:30:87.28:0,87,1234	0/0:16,0:16:48.12:0,48,652	0/0:32,0:32:96.30:0,96,1346	1/1:3,20:23:68.88:647,69,0	1/1:5,15:20:50.75:488,51,0	0/0:21,0:20:60.18:0,60,830	0/0:37,0:37:99:0,105,1474	0/0:29,0:29:84.28:0,84,1210	0/0:22,0:22:66.22:0,66,950	0/0:27,0:27:81.26:0,81,1148	0/0:28,0:28:84.24:0,84,1186	0/0:28,0:28:84.27:0,84,1193	0/0:31,0:31:93.30:0,93,1321	0/0:22,0:22:66.22:0,66,951	0/0:22,0:22:60.15:0,60,812	0/0:13,0:13:39.13:0,39,561	0/0:23,0:23:63.20:0,63,891	0/0:32,0:32:96.32:0,96,1383	0/0:25,0:25:75.25:0,75,1078	0/0:19,0:19:54.17:0,54,759	0/0:32,0:32:96.31:0,96,1363	0/0:25,0:25:75.20:0,75,1039	0/0:32,0:32:96.30:0,96,1361	0/0:24,0:24:72.24:0,72,1037	0/0:27,0:27:81.26:0,81,1148	0/0:27,0:27:81.27:0,81,1163
chr10	80543552	.	GTGTC	G	1080.71	PASS	AB=0.958;AC=6;AF=0.107;AN=56;BaseQRankSum=8.711;DP=776;FS=20.397;HRun=0;HaplotypeScore=130.7035;InbreedingCoeff=0.6956;MQ=69.68;MQ0=3;MQRankSum=-1.237;QD=10.81;ReadPosRankSum=0.464;VQSLOD=1.9616;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:28:9:0,9,1150	0/0:17,0:17:45.14:0,45,1035	0/0:26,0:23:20.76:0,21,348	0/0:40,0:35:40.91:0,41,799	0/0:23,0:23:51.13:0,51,1041	1/1:9,27:36:54.18:861,54,0	1/1:11,7:18:24.05:338,24,0	0/0:47,0:47:57.16:0,57,1117	0/0:42,0:42:93.32:0,93,2166	0/0:36,0:36:78.25:0,78,1741	0/0:21,0:21:48.15:0,48,1101	0/0:25,0:25:60.18:0,60,1320	0/0:38,0:38:99:0,99,2234	0/0:30,0:30:54.07:0,54,1142	0/0:31,0:31:69.19:0,69,1514	0/1:22,1:23:3.04:3,0,914	0/1:22,1:22:3.04:3,0,862	0/0:15,0:15:27.02:0,27,534	0/0:16,0:16:13.24:0,13,220	0/0:26,0:26:57.20:0,57,1347	0/0:43,3:46:30.03:0,30,1561	0/0:22,0:21:33.09:0,33,680	0/0:27,0:27:45.09:0,45,865	0/0:30,0:30:72.25:0,72,1732	0/0:14,0:14:33.10:0,33,698	0/0:35,0:35:75.24:0,75,1643	0/0:28,0:28:60.19:0,60,1394	0/0:13,0:13:30.10:0,30,709
chr10	80543696	.	TCA	T	923.36	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.436;DP=736;FS=6.578;HRun=0;HaplotypeScore=97.1533;InbreedingCoeff=0.9950;MQ=88.34;MQ0=0;MQRankSum=-7.110;QD=26.38;ReadPosRankSum=1.734;VQSLOD=4.9615;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,114,1971	0/0:13,0:13:30.09:0,30,511	0/0:29,0:29:72.22:0,72,1240	0/0:26,0:26:68.75:0,69,1025	0/0:20,0:20:57.20:0,57,1020	1/1:0,25:24:57.19:793,57,0	1/1:2,8:10:18.06:250,18,0	0/0:39,0:39:99:0,105,1768	0/0:26,0:26:65.78:0,66,1152	0/0:30,0:30:87.28:0,87,1512	0/0:21,0:21:60.14:0,60,961	0/0:30,0:30:90.28:0,90,1529	0/0:31,0:31:90.28:0,90,1554	0/0:26,0:26:69.22:0,69,1206	0/0:45,0:45:99:0,126,2139	0/0:17,0:17:51.17:0,51,912	0/0:20,0:20:54.16:0,54,940	0/0:17,0:17:45.05:0,45,677	0/0:19,0:19:57.12:0,57,926	0/0:34,0:34:93.29:0,93,1613	0/0:38,0:37:99:0,108,1882	0/0:29,0:29:84.25:0,84,1425	0/0:29,0:29:81.24:0,81,1388	0/0:27,0:27:75.26:0,75,1341	0/0:21,0:21:60.19:0,60,1050	0/0:40,0:40:99:0,114,2023	0/0:22,0:22:63.20:0,63,1103	0/0:9,0:9:27.09:0,27,486
chr10	80543915	.	GGGA	G	204.32	PASS	AB=0.964;AC=6;AF=0.107;AN=56;BaseQRankSum=6.093;DP=341;FS=16.027;HRun=0;HaplotypeScore=68.3085;InbreedingCoeff=0.3406;MQ=71.68;MQ0=1;MQRankSum=-1.320;QD=4.64;ReadPosRankSum=-2.367;VQSLOD=-0.3721;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:8:14.46:14,0,86	0/0:14,0:14:39.11:0,39,713	0/0:22,0:20:53.80:0,54,755	0/0:15,0:15:5.25:0,5,496	0/0:9,0:9:21.04:0,21,299	0/1:10,2:12:0.97:140,0,1	1/1:7,2:9:17.79:130,18,0	0/0:11,0:10:26.89:0,27,216	0/0:18,0:18:51.11:0,51,878	0/0:13,0:13:33:0,33,454	0/0:10,0:10:26.98:0,27,397	0/0:14,0:14:37.62:0,38,588	0/1:4,0:4:14.96:15,0,35	0/1:10,0:10:32.33:32,0,88	0/0:14,0:14:30.09:0,30,586	0/0:5,0:5:15.05:0,15,294	0/0:23,0:23:69.17:0,69,1310	0/0:15,0:15:39.13:0,39,782	0/0:15,0:15:45.11:0,45,746	0/0:10,0:10:21.02:0,21,307	0/0:10,0:9:24.04:0,24,326	0/0:12,0:12:33.03:0,33,569	0/0:7,0:7:8.98:0,9,127	0/0:16,0:16:44.93:0,45,882	0/0:11,0:11:29.82:0,30,429	0/0:15,0:15:39.06:0,39,655	0/0:13,0:13:38.15:0,38,668	0/0:5,0:5:15.04:0,15,250
chr10	80544892	.	TG	T	1224.09	PASS	AC=38;AF=0.905;AN=42;BaseQRankSum=-0.018;DP=59;FS=0.000;HRun=4;HaplotypeScore=21.4418;InbreedingCoeff=0.2542;MQ=85.14;MQ0=0;MQRankSum=-3.908;QD=25.50;ReadPosRankSum=2.085;VQSLOD=1.9122;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,1:1:3.01:36,3,0	0/0:7,0:4:14.87:0,15,147	0/0:3,0:1:1.82:0,2,5	1/1:0,3:3:6.02:71,6,0	1/1:1,1:2:3.01:36,3,0	1/1:0,1:1:3.01:36,3,0	1/1:1,4:4:9.03:108,9,0	1/1:0,2:2:6.02:72,6,0	1/1:0,2:2:6.02:72,6,0	./.	1/1:0,1:1:3.01:36,3,0	1/1:0,1:1:3.01:36,3,0	1/1:0,2:2:6.02:72,6,0	1/1:1,1:2:3.01:36,3,0	1/1:2,1:3:3.01:36,3,0	./.	./.	1/1:1,2:3:6.02:72,6,0	1/1:1,4:5:12.04:143,12,0	./.	1/1:0,3:3:9.03:107,9,0	1/1:0,2:2:6.02:71,6,0	./.	1/1:0,2:2:6.02:72,6,0	./.	1/1:0,2:2:6.02:72,6,0	1/1:0,6:6:12.04:144,12,0
chr10	80546847	.	T	TC	41.97	PASS	AC=4;AF=0.154;AN=26;BaseQRankSum=-1.308;DP=392;FS=0.000;HRun=0;HaplotypeScore=7.1711;InbreedingCoeff=0.4829;MQ=12.14;MQ0=139;MQRankSum=1.474;QD=3.82;ReadPosRankSum=0.083;VQSLOD=2.5429;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	1/1:1,8:2:6.02:84,6,0	./.	0/0:20,0:3:9.03:0,9,125	0/0:19,0:4:9.03:0,9,125	0/0:27,0:1:3.01:0,3,42	./.	./.	1/1:1,1:1:3.01:46,3,0	./.	0/0:18,0:8:6.02:0,6,83	0/0:17,0:7:15.05:0,15,209	0/0:13,0:4:12:0,12,145	./.	0/0:16,0:4:12.04:0,12,167	./.	0/0:7,0:3:6.02:0,6,79	./.	0/0:27,0:1:3.01:0,3,38	0/0:11,0:3:9:0,9,104	./.	0/0:22,0:6:18.06:0,18,251	./.	./.
chr10	80551724	.	CG	C	1453.20	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=4.844;DP=577;FS=0.000;HRun=2;HaplotypeScore=62.6109;InbreedingCoeff=0.8813;MQ=42.45;MQ0=110;MQRankSum=1.841;QD=18.39;ReadPosRankSum=2.473;VQSLOD=3.7212;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,38:35:60.20:778,60,0	0/0:14,0:10:15.04:0,15,196	./.	./.	0/0:17,0:15:15.05:0,15,225	0/0:21,0:18:24.04:0,24,333	0/0:35,0:23:30.01:0,30,390	0/0:25,0:8:24.08:0,24,358	0/0:26,0:25:39.12:0,39,565	0/0:20,0:13:39.09:0,39,542	0/0:13,0:11:15.05:0,15,224	0/0:19,0:17:26.79:0,27,360	1/1:2,20:18:26.92:348,27,0	1/1:1,15:14:36.12:467,36,0	0/0:15,0:14:15.05:0,15,225	0/0:7,0:7:15.05:0,15,225	0/0:31,0:27:33.08:0,33,460	0/0:30,0:25:33.55:0,34,459	0/0:16,0:5:15.04:0,15,205	0/0:12,0:10:15.05:0,15,224	0/0:39,0:33:42.01:0,42,577	0/0:14,0:13:5.97:0,6,90	0/0:19,0:14:18.06:0,18,266	0/0:26,0:16:27.09:0,27,405	0/0:15,0:10:15.05:0,15,224	0/0:19,0:14:42.13:0,42,608	0/0:16,0:12:18.06:0,18,269	0/0:10,0:9:6.02:0,6,90
chr10	80552846	.	TTC	T	49.74	PASS	AB=0.898;AC=9;AF=0.173;AN=52;BaseQRankSum=3.204;DP=363;FS=0.000;HRun=0;HaplotypeScore=46.2461;InbreedingCoeff=-0.0316;MQ=77.44;MQ0=3;MQRankSum=-0.660;QD=0.46;ReadPosRankSum=1.187;VQSLOD=1.3382;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:10:8.99:0,9,76	0/0:4,0:4:9:0,9,95	./.	0/0:23,0:14:0:0,0,0	0/0:16,1:17:2.38:0,2,377	./.	0/0:9,0:9:6.01:0,6,67	0/1:28,2:29:36.79:37,0,206	0/0:10,0:11:18.06:0,18,274	0/1:16,0:16:12.57:13,0,215	0/0:7,0:7:12.04:0,12,179	0/1:9,2:11:18.59:19,0,167	0/0:11,0:16:6:0,6,52	0/0:1,0:3:3:0,3,26	0/0:7,0:7:6.01:0,6,71	0/0:7,0:7:15.05:0,15,228	0/0:19,0:18:21.86:0,22,454	0/0:3,0:3:1.55:0,2,4	0/0:21,0:21:34.11:0,34,405	0/1:8,2:10:18.63:19,0,143	0/0:14,0:13:11.56:0,12,124	0/1:12,0:12:0.84:1,0,346	0/0:11,0:12:21.05:0,21,296	1/1:4,0:5:5.85:47,6,0	0/1:5,2:7:21.61:22,0,125	0/1:14,2:15:16.94:17,0,104	0/0:19,2:21:2.48:0,2,466	0/0:15,0:15:3.58:0,4,405
chr10	80552929	.	C	CTA	69.02	PASS	AC=6;AF=0.143;AN=42;BaseQRankSum=-0.028;DP=293;FS=5.222;HRun=0;HaplotypeScore=43.2676;InbreedingCoeff=0.4847;MQ=76.39;MQ0=52;MQRankSum=0.710;QD=4.06;ReadPosRankSum=0.182;VQSLOD=1.3735;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,4:4:6.02:106,6,0	0/0:2,0:2:6.02:0,6,82	./.	0/0:45,0:23:1.82:0,2,21	0/0:10,0:7:9.02:0,9,107	1/1:6,0:4:2.68:11,3,0	./.	0/0:54,0:41:99:0,105,1149	./.	0/0:10,0:8:21.05:0,21,259	0/0:5,0:5:15.05:0,15,205	0/0:2,0:2:2.99:0,3,24	1/1:3,1:2:3.01:53,3,0	./.	./.	./.	0/0:24,0:13:14.31:0,14,185	0/0:16,0:8:17.91:0,18,247	0/0:17,0:12:33.04:0,33,384	0/0:4,0:4:12.04:0,12,165	0/0:5,0:2:3.01:0,3,41	0/0:1,0:1:3:0,3,25	0/0:3,0:1:3.01:0,3,41	./.	0/0:9,0:7:18.03:0,18,213	0/0:7,0:5:15.02:0,15,171	0/0:10,0:10:24.08:0,24,329	0/0:32,0:25:69.63:0,70,876
chr10	80553025	.	CTA	C	2415.14	PASS	AC=34;AF=0.895;AN=38;BaseQRankSum=3.368;DP=217;FS=2.186;HRun=0;HaplotypeScore=33.2244;InbreedingCoeff=0.4259;MQ=35.79;MQ0=64;MQRankSum=3.879;QD=12.98;ReadPosRankSum=2.130;VQSLOD=3.2962;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,5:6:12.04:172,12,0	./.	./.	1/1:2,3:5:5.84:84,6,0	1/1:5,1:4:2.04:6,2,0	1/1:0,1:1:3.01:43,3,0	1/1:25,21:28:35.03:501,35,0	0/0:7,0:6:12.04:0,12,185	1/1:1,3:4:11.99:148,12,0	1/1:1,9:10:15.05:215,15,0	0/0:2,0:2:3.01:0,3,52	./.	./.	./.	1/1:2,4:5:8.90:101,9,0	1/1:24,5:13:1.34:126,1,0	1/1:7,0:1:2.96:19,3,0	1/1:11,8:15:16.93:323,17,0	1/1:1,5:6:8.90:101,9,0	1/1:1,2:2:6.02:86,6,0	./.	./.	./.	1/1:2,6:6:12.04:172,12,0	1/1:4,1:2:6.01:72,6,0	1/1:4,5:8:4.96:95,5,0	1/1:6,10:10:18.06:258,18,0
chr10	80553027	.	A	ATC	193.29	PASS	AB=0.972;AC=10;AF=0.263;AN=38;BaseQRankSum=-2.674;DP=214;FS=17.605;HRun=0;HaplotypeScore=45.2310;InbreedingCoeff=0.2619;MQ=36.26;MQ0=60;MQRankSum=-3.233;QD=1.79;ReadPosRankSum=-2.337;VQSLOD=-0.6070;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:6:7.27:0,7,18	./.	./.	1/1:4,2:6:0.03:39,0,0	0/0:7,0:5:2.92:0,3,17	0/0:1,0:1:1.55:0,2,4	1/1:45,0:29:0.85:155,1,0	0/0:6,0:6:12.04:0,12,183	0/0:4,0:4:5.19:0,5,13	0/0:9,1:10:9.08:0,9,23	0/0:2,0:2:3.01:0,3,46	./.	./.	./.	0/0:6,0:5:6.59:0,7,28	0/1:28,0:13:3.25:3,0,20	1/1:6,0:1:3:29,3,0	0/1:16,1:15:50.91:51,0,52	0/0:6,0:6:6.59:0,7,28	0/0:3,0:2:3.63:0,4,9	./.	./.	./.	0/0:8,0:6:6.70:0,7,16	1/1:6,0:3:2.70:24,3,0	0/0:9,0:8:8.63:0,9,34	0/0:16,0:10:10.90:0,11,27
chr10	80553045	.	ATC	A	52.34	PASS	AB=0.932;AC=8;AF=0.174;AN=46;BaseQRankSum=2.622;DP=233;FS=0.000;HRun=0;HaplotypeScore=49.3875;InbreedingCoeff=0.1001;MQ=62.88;MQ0=34;MQRankSum=-1.030;QD=0.99;ReadPosRankSum=-0.705;VQSLOD=1.1666;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:6:12.04:0,12,200	0/0:7,0:5:5.67:0,6,61	0/1:14,0:5:0.41:0,0,26	0/1:8,1:9:62.58:63,0,74	1/1:6,0:5:2.04:6,2,0	0/0:1,0:1:2.97:0,3,20	0/0:41,0:38:99:0,105,1104	0/0:6,0:6:15.05:0,15,240	0/0:6,0:6:17.08:0,17,203	0/0:11,1:12:21.07:0,21,322	0/0:2,0:2:3.01:0,3,56	./.	./.	0/0:1,0:1:3.01:0,3,30	0/1:7,1:7:28.52:29,0,126	0/0:27,0:17:0.36:0,0,287	0/0:7,0:2:5.90:0,6,37	0/1:14,1:15:19.92:20,0,365	0/0:10,0:10:20.95:0,21,270	0/0:3,0:3:9.03:0,9,136	./.	1/1:0,1:1:3.01:44,3,0	./.	0/0:7,0:7:15.05:0,15,236	0/0:10,0:6:17.85:0,18,228	0/0:8,0:7:11.90:0,12,151	0/0:15,0:13:27.09:0,27,473
chr10	80553828	.	T	TGGC	147.30	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=4.200;DP=359;FS=7.111;HRun=0;HaplotypeScore=44.0457;InbreedingCoeff=0.6827;MQ=45.18;MQ0=71;MQRankSum=-4.282;QD=14.73;ReadPosRankSum=-2.832;VQSLOD=1.5727;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:3:6.02:70,6,0	0/0:10,0:8:21.07:0,21,384	0/0:1,0:1:3.01:0,3,35	./.	0/0:32,0:26:54.17:0,54,934	1/1:1,1:1:3.01:34,3,0	1/1:0,2:2:6.02:108,6,0	0/0:17,0:11:33.10:0,33,579	0/0:26,0:24:39.13:0,39,727	0/0:17,0:13:39.12:0,39,696	0/0:20,0:18:33.11:0,33,598	0/0:14,0:11:27.09:0,27,503	1/1:0,1:2:3.01:34,3,0	1/1:0,1:1:3.01:35,3,0	0/0:10,0:8:9.03:0,9,163	0/0:15,0:13:33.10:0,33,584	0/0:7,0:6:9.03:0,9,168	0/0:4,0:1:3.01:0,3,56	0/0:18,0:12:36.11:0,36,639	0/0:30,0:23:66.23:0,66,1225	0/0:8,0:3:9.03:0,9,161	0/0:8,0:7:12.04:0,12,224	0/0:24,0:22:51.17:0,51,950	0/0:6,0:6:12.04:0,12,224	0/0:18,0:15:33.07:0,33,579	0/0:26,0:22:66.21:0,66,1198	0/0:19,0:14:30.09:0,30,538	0/0:15,0:14:42.14:0,42,764
chr10	80562431	.	C	CT	2050.66	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-0.524;DP=556;FS=2.176;HRun=9;HaplotypeScore=62.3972;InbreedingCoeff=0.9920;MQ=86.43;MQ0=0;MQRankSum=-2.308;QD=27.71;ReadPosRankSum=1.985;VQSLOD=3.8179;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:18:42.11:464,42,0	0/0:6,0:6:18:0,18,156	0/0:16,0:17:31.23:0,31,245	0/0:27,0:27:43.89:0,44,409	0/0:30,1:31:41.77:0,42,592	0/0:5,0:24:35.58:0,36,122	0/0:1,0:16:24.22:0,24,71	0/0:29,2:31:35.78:0,36,540	0/0:24,0:24:65.93:0,66,566	0/0:25,0:25:59.97:0,60,518	0/0:13,0:13:32.99:0,33,286	0/0:8,0:8:17.99:0,18,156	1/1:3,31:34:96.26:1059,96,0	1/1:1,21:22:63.09:670,63,0	0/0:19,0:19:50.98:0,51,443	0/0:15,0:15:29.99:0,30,260	0/0:13,0:13:38.99:0,39,339	0/0:12,0:12:32.98:0,33,287	0/0:28,0:30:69.85:0,70,603	0/0:16,0:16:44.99:0,45,391	0/0:22,0:22:56.98:0,57,495	0/0:15,0:15:35.98:0,36,312	0/0:27,0:27:71.98:0,72,625	0/0:11,0:11:23.98:0,24,208	0/0:19,0:19:38.96:0,39,338	0/0:24,0:24:65.96:0,66,567	0/0:25,0:24:62.96:0,63,545	0/0:12,0:12:35.99:0,36,313
chr10	80564402	.	AT	A	6782.02	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=10.959;DP=539;FS=13.054;HRun=9;HaplotypeScore=57.6540;InbreedingCoeff=0.9936;MQ=83.34;MQ0=1;MQRankSum=-0.855;QD=21.67;ReadPosRankSum=2.066;VQSLOD=4.8393;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.14:0,48,554	1/1:1,10:11:24.01:220,24,0	0/0:35,0:26:46.86:0,47,458	0/0:26,0:21:14.56:0,15,243	1/1:1,21:22:57.02:520,57,0	0/0:17,0:17:48.14:0,48,554	0/0:12,0:12:36.11:0,36,416	1/1:10,14:24:42:379,42,0	0/0:17,0:17:45.11:0,45,498	1/1:3,18:21:54:488,54,0	1/1:3,21:24:59.98:540,60,0	0/0:19,0:19:48.14:0,48,554	0/0:20,0:20:54.16:0,54,623	0/0:16,0:16:45.13:0,45,519	1/1:1,21:22:54.03:494,54,0	1/1:1,14:15:36.02:329,36,0	1/1:3,10:13:26.44:246,26,0	1/1:0,7:7:15.01:137,15,0	1/1:2,22:24:66.03:600,66,0	1/1:3,21:24:60.03:549,60,0	1/1:3,14:17:30.01:275,30,0	0/0:18,0:18:51.15:0,51,589	0/0:21,0:21:60.17:0,60,682	0/0:6,0:6:18.05:0,18,208	1/1:0,21:21:60.03:549,60,0	1/1:2,21:23:63.03:577,63,0	1/1:3,22:25:57.03:522,57,0	1/1:0,20:20:39.02:357,39,0
chr10	80565639	.	A	AAATAAT	4940.31	PASS	AC=36;AF=0.783;AN=46;BaseQRankSum=-2.923;DP=245;FS=6.440;HRun=0;HaplotypeScore=52.9292;InbreedingCoeff=0.5740;MQ=69.94;MQ0=3;MQRankSum=-2.689;QD=26.28;ReadPosRankSum=-2.480;VQSLOD=3.0230;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:16:18.06:356,18,0	1/1:2,0:3:2.94:18,3,0	./.	./.	1/1:6,3:11:12.04:256,12,0	0/0:6,0:14:18.06:0,18,250	0/0:3,0:5:2.97:0,3,20	1/1:37,0:36:33.11:831,33,0	0/0:5,0:5:6.02:0,6,102	1/1:1,1:2:3.01:97,3,0	1/1:6,2:8:6.02:194,6,0	0/0:5,0:5:9.03:0,9,184	1/1:6,0:7:6.02:157,6,0	1/1:7,0:8:3.01:78,3,0	1/1:3,1:4:3.01:97,3,0	1/1:4,3:6:3.01:97,3,0	1/1:6,6:13:21.07:509,21,0	1/1:10,2:12:9.03:291,9,0	1/1:16,2:18:21.04:561,21,0	1/1:6,3:10:12.04:330,12,0	./.	./.	0/0:5,0:5:6.02:0,6,123	./.	1/1:4,3:9:12.04:327,12,0	1/1:3,1:5:6.02:142,6,0	1/1:6,4:11:17.99:502,18,0	1/1:5,1:6:3.01:97,3,0
chr10	80567356	.	A	AT	1431.11	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-3.494;DP=511;FS=8.433;HRun=9;HaplotypeScore=51.2783;InbreedingCoeff=0.8181;MQ=64.22;MQ0=2;MQRankSum=0.919;QD=18.35;ReadPosRankSum=0.163;VQSLOD=3.3332;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,21:27:60.16:663,60,0	0/0:4,0:4:12:0,12,104	0/1:19,0:13:20.44:20,0,84	0/0:10,0:9:14.99:0,15,129	0/0:28,0:29:76.98:0,77,649	0/0:22,0:22:56.94:0,57,486	0/0:13,0:13:29.97:0,30,257	0/0:25,0:25:71.95:0,72,618	0/0:20,0:20:53.98:0,54,469	0/0:24,0:24:68.96:0,69,594	0/0:20,0:20:53.98:0,54,469	0/0:7,0:7:21:0,21,182	1/1:0,17:17:45.12:498,45,0	1/1:1,13:14:36.10:398,36,0	0/0:20,0:20:59.99:0,60,521	0/0:9,0:9:23.99:0,24,206	0/0:22,0:22:56.93:0,57,487	0/0:30,0:29:45.67:0,46,524	0/0:22,0:22:59.98:0,60,520	0/0:27,0:27:74.98:0,75,651	0/0:14,0:14:41.97:0,42,360	0/0:9,0:9:26.99:0,27,234	0/0:20,0:20:53.95:0,54,462	0/0:11,0:11:29.98:0,30,256	0/0:19,0:19:50.99:0,51,443	0/0:17,0:17:50.98:0,51,440	0/0:29,0:28:77.96:0,78,673	0/0:10,0:10:14.51:0,15,219
chr10	80574420	.	TG	T	2348.03	PASS	AB=0.994;AC=47;AF=0.839;AN=56;BaseQRankSum=-0.600;DP=387;FS=6.221;HRun=1;HaplotypeScore=89.6253;InbreedingCoeff=-0.1113;MQ=74.11;MQ0=13;MQRankSum=0.244;QD=6.07;ReadPosRankSum=4.979;VQSLOD=0.7524;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:12:25.99:98,26,0	1/1:4,0:4:10.37:40,10,0	0/1:30,1:13:61.96:133,0,62	0/1:35,1:13:48.41:53,0,48	1/1:16,0:16:33.57:125,34,0	0/1:21,0:21:10.26:10,0,15	1/1:5,0:5:12.84:49,13,0	1/1:21,0:21:36.92:230,37,0	0/1:14,0:14:30.39:62,0,30	1/1:15,0:15:13.61:158,14,0	0/1:20,0:20:1.96:2,0,2	1/1:11,0:11:26.53:107,27,0	1/1:10,0:10:21.24:99,21,0	0/1:5,0:5:18.87:19,0,20	1/1:11,2:11:28.42:185,28,0	1/1:10,0:10:25.28:110,25,0	0/1:18,0:18:59.72:60,0,62	1/1:7,0:7:9.99:53,10,0	1/1:12,0:12:33.88:163,34,0	1/1:20,0:20:43.23:166,43,0	1/1:6,0:5:10.18:38,10,0	0/1:13,0:12:38.26:55,0,38	1/1:7,0:7:3.58:45,4,0	0/1:10,0:10:3.45:30,0,3	1/1:15,0:15:24.60:129,25,0	1/1:17,0:17:21.64:109,22,0	1/1:14,0:14:35.11:142,35,0	1/1:2,0:2:5.09:19,5,0
chr10	80574422	.	TG	T	2752.84	PASS	AB=0.978;AC=51;AF=0.911;AN=56;BaseQRankSum=-0.182;DP=399;FS=0.000;HRun=1;HaplotypeScore=89.9936;InbreedingCoeff=-0.1098;MQ=75.82;MQ0=12;MQRankSum=-0.533;QD=6.90;ReadPosRankSum=4.175;VQSLOD=0.7868;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:13:25.64:98,26,0	1/1:5,0:5:13.36:65,13,0	0/1:29,3:14:83.53:106,0,84	0/1:36,1:14:68.94:69,0,83	1/1:16,0:16:35.32:131,35,0	0/1:22,0:22:5.05:26,0,5	1/1:5,0:5:12.84:49,13,0	1/1:21,0:21:39.40:232,39,0	1/1:13,0:13:4.88:70,5,0	1/1:17,0:17:24.97:216,25,0	1/1:21,0:21:10.14:91,10,0	1/1:14,0:14:35.50:180,36,0	1/1:10,0:10:21.21:91,21,0	0/1:5,0:5:2.86:23,0,3	1/1:11,2:11:28.40:176,28,0	1/1:10,0:10:26.30:108,26,0	0/1:16,0:16:14.18:45,0,14	1/1:7,0:7:10.05:51,10,0	1/1:12,0:12:33.88:163,34,0	1/1:21,0:21:43.32:166,43,0	1/1:5,0:5:13.15:58,13,0	1/1:14,0:13:2.29:82,2,0	1/1:9,0:9:8.45:53,8,0	1/1:11,0:11:10.66:74,11,0	1/1:15,0:15:27.60:134,28,0	1/1:17,0:17:29.76:146,30,0	1/1:14,0:14:34.57:146,35,0	1/1:2,0:2:5.09:19,5,0
chr10	80576371	.	AT	A	2436.77	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=12.691;DP=521;FS=7.383;HRun=7;HaplotypeScore=55.9205;InbreedingCoeff=0.8520;MQ=71.84;MQ0=0;MQRankSum=-0.357;QD=23.66;ReadPosRankSum=2.394;VQSLOD=3.7619;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,12:13:30.07:306,30,0	0/0:8,0:8:24.07:0,24,292	0/0:10,0:10:14.06:0,14,126	0/1:8,0:8:12.44:12,0,101	0/0:26,0:26:75.24:0,75,943	1/1:0,24:24:69.16:704,69,0	1/1:3,17:20:48.11:490,48,0	0/0:31,0:31:87.27:0,87,1082	0/0:15,0:15:36.11:0,36,449	0/0:29,0:29:75.24:0,75,944	0/0:25,0:26:69.07:0,69,832	0/0:11,0:11:33.11:0,33,415	1/1:1,17:18:48.11:490,48,0	1/1:0,20:20:60.14:612,60,0	0/0:25,0:25:63.20:0,63,792	0/0:15,0:15:42.13:0,42,528	0/0:19,0:19:51.16:0,51,640	0/0:16,0:16:48.15:0,48,604	0/0:14,0:14:39.11:0,39,479	0/0:34,0:34:93.29:0,93,1158	0/0:8,0:8:21.07:0,21,264	0/0:19,0:19:54.16:0,54,664	0/0:23,0:23:69.22:0,69,868	0/0:8,0:7:21.07:0,21,264	0/0:19,0:19:51.16:0,51,641	0/0:21,0:21:51.16:0,51,642	0/0:39,0:39:99:0,108,1339	0/0:2,0:2:3.01:0,3,38
chr10	80577298	.	AACACACACACACACACACACAC	A	1195.14	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.055;DP=367;FS=9.593;HRun=0;HaplotypeScore=179.1837;InbreedingCoeff=0.7804;MQ=70.96;MQ0=14;MQRankSum=-4.726;QD=37.35;ReadPosRankSum=1.022;VQSLOD=1.8625;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,5:9:3.90:115,4,0	0/0:6,0:6:18.06:0,18,1461	0/0:28,0:21:54.17:0,54,3318	0/0:23,0:18:51.15:0,51,2655	0/0:23,0:23:69.24:0,69,4893	1/1:3,0:9:3.01:146,3,0	0/0:6,0:4:3.01:0,3,226	0/0:28,0:26:72.25:0,72,5191	0/0:17,0:16:45.15:0,45,3664	0/0:8,0:8:18.06:0,18,1444	0/0:17,0:17:45.15:0,45,3730	0/0:7,0:6:12.03:0,12,643	1/1:2,5:6:12.04:710,12,0	1/1:1,3:4:6.02:355,6,0	0/0:8,0:8:21.07:0,21,1446	0/0:17,0:17:36.12:0,36,2450	0/0:10,0:9:24.08:0,24,1628	0/0:7,0:6:15.02:0,15,736	0/0:21,0:20:42.14:0,42,3128	0/0:16,0:16:36.11:0,36,2358	0/0:18,0:16:33.11:0,33,2662	0/0:8,0:8:15.05:0,15,1106	0/0:9,0:9:27.08:0,27,1652	0/0:21,0:17:33.11:0,33,2533	0/0:9,0:9:27.09:0,27,2219	0/0:15,0:15:39.13:0,39,3163	0/0:9,0:9:18.06:0,18,1445	0/0:4,0:4:12.04:0,12,999
chr10	80577784	.	A	ATGTGTGTG	1702.83	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=3.346;DP=480;FS=4.320;HRun=0;HaplotypeScore=121.0751;InbreedingCoeff=0.7453;MQ=66.37;MQ0=1;MQRankSum=-5.214;QD=10.20;ReadPosRankSum=-2.575;VQSLOD=1.6990;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:36:15.01:193,15,0	0/0:3,0:3:9.03:0,9,230	0/1:31,0:18:14.51:23,0,15	0/1:31,0:24:2.90:3,0,29	0/0:19,0:20:39.10:0,39,859	1/1:5,11:18:21.07:780,21,0	1/1:12,10:22:6.02:246,6,0	0/0:30,0:30:28.76:0,29,643	0/0:16,0:16:24.06:0,24,534	0/0:17,0:17:45.13:0,45,1049	0/0:10,0:11:18.06:0,18,408	0/0:17,0:17:45.15:0,45,1079	1/1:3,0:14:18.05:347,18,0	1/1:6,0:15:15.04:281,15,0	0/0:7,0:8:23.92:0,24,411	0/0:5,0:5:9.02:0,9,178	0/0:27,0:27:51.17:0,51,1267	0/0:12,0:12:15.03:0,15,295	0/0:15,0:17:21.03:0,21,413	0/0:10,0:11:18.02:0,18,344	0/0:27,0:29:61.03:0,61,1291	0/0:10,0:11:24.08:0,24,552	0/0:7,0:7:15.04:0,15,331	0/0:23,0:24:51.14:0,51,1175	0/0:16,0:18:36.12:0,36,876	0/0:13,0:13:15.01:0,15,326	0/0:11,0:11:27.09:0,27,689	0/0:5,0:5:9.01:0,9,176
chr10	80577929	.	A	AATAT	901.70	PASS	AB=1.000;AC=9;AF=0.180;AN=50;BaseQRankSum=3.568;DP=178;FS=0.000;HRun=0;HaplotypeScore=33.2222;InbreedingCoeff=0.5686;MQ=79.38;MQ0=0;MQRankSum=-1.011;QD=31.09;ReadPosRankSum=0.049;VQSLOD=3.1148;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:12.04:306,12,0	0/0:3,0:3:6.02:0,6,105	0/0:7,0:6:2.02:0,2,4	0/0:8,0:4:6.56:0,7,58	0/0:8,0:8:12.04:0,12,210	1/1:4,0:4:8.99:94,9,0	./.	0/0:35,0:35:81.28:0,81,1385	0/0:3,0:3:6.02:0,6,105	0/0:4,0:4:9.03:0,9,158	0/0:4,0:4:6.01:0,6,77	0/0:6,0:6:12.04:0,12,197	1/1:1,4:6:9.03:229,9,0	1/1:1,6:7:15.05:378,15,0	0/0:2,0:2:3.01:0,3,53	./.	0/0:11,0:11:33.11:0,33,569	0/0:3,0:3:7.99:0,8,77	0/0:13,0:13:27.09:0,27,470	0/1:3,0:3:37.23:37,0,47	./.	0/0:1,0:1:3.01:0,3,53	0/0:7,0:7:15.05:0,15,259	0/0:2,0:2:3.01:0,3,53	0/0:9,0:9:24.06:0,24,354	0/0:7,0:7:21.07:0,21,343	0/0:7,0:7:18.06:0,18,311	0/0:6,0:6:18.05:0,18,288
chr10	80578187	.	CTTTTTTTT	C	2035.65	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.782;DP=320;FS=11.549;HRun=17;HaplotypeScore=77.3913;InbreedingCoeff=0.8390;MQ=74.18;MQ0=2;MQRankSum=-8.211;QD=31.32;ReadPosRankSum=4.636;VQSLOD=-0.3547;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,13:20:26.92:598,27,0	0/0:2,0:4:12.03:0,12,293	0/0:28,0:13:12.31:0,12,165	0/0:20,0:9:12.47:0,12,216	0/0:8,0:14:42.14:0,42,1187	1/1:3,13:16:26.98:601,27,0	1/1:0,5:5:6.02:134,6,0	0/0:23,0:38:77.07:0,77,2089	0/0:8,0:8:21.07:0,21,626	0/0:6,0:11:33.11:0,33,908	0/0:5,0:10:27.09:0,27,753	0/0:10,0:10:21.07:0,21,631	1/1:4,12:16:23.90:534,24,0	1/1:2,6:8:14.97:335,15,0	0/0:8,0:9:21.07:0,21,644	0/0:2,0:2:6.02:0,6,176	0/0:11,0:18:48.16:0,48,1417	0/0:6,0:11:18.06:0,18,447	0/0:10,0:13:27.09:0,27,766	0/0:4,0:9:21.07:0,21,573	0/0:4,0:4:12.04:0,12,381	0/0:4,0:4:6.02:0,6,159	0/0:2,0:2:3.01:0,3,95	0/0:3,0:4:12.04:0,12,413	0/0:5,0:7:18.06:0,18,509	0/0:6,0:6:15.05:0,15,449	0/0:11,0:14:24.08:0,24,771	0/0:4,0:6:12.04:0,12,286
chr10	80578365	.	CGG	C	1009.82	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.418;DP=339;FS=2.332;HRun=9;HaplotypeScore=49.2369;InbreedingCoeff=0.9614;MQ=78.13;MQ0=0;MQRankSum=-4.158;QD=27.29;ReadPosRankSum=0.885;VQSLOD=3.2151;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:36.10:419,36,0	0/0:5,0:5:15.05:0,15,233	0/0:9,0:8:18.04:0,18,246	0/0:13,0:14:23.29:0,23,378	0/0:15,0:15:36.09:0,36,560	0/0:10,0:13:19.46:0,19,205	0/0:7,0:9:15.89:0,16,168	0/0:11,0:13:26.98:0,27,330	0/0:10,0:10:27.09:0,27,443	0/0:7,0:7:12.04:0,12,197	0/0:15,0:15:36.12:0,36,590	0/0:15,0:15:39:0,39,560	1/1:1,13:14:39.12:454,39,0	1/1:2,7:9:24.07:279,24,0	0/0:22,0:22:65.67:0,66,1009	0/0:6,0:6:18.05:0,18,271	0/0:9,0:9:21.07:0,21,345	0/0:9,0:9:20.39:0,20,334	0/0:16,0:17:48.16:0,48,784	0/0:9,0:9:27.09:0,27,438	0/0:10,0:10:24.07:0,24,371	0/0:11,0:11:27.09:0,27,443	0/0:16,0:16:45.15:0,45,736	0/0:11,0:11:27.01:0,27,384	0/0:19,0:20:56.67:0,57,873	0/0:11,0:11:30.08:0,30,444	0/0:18,0:20:47.63:0,48,701	0/0:6,0:6:18.06:0,18,295
chr10	80578443	.	CT	C	2077.34	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.192;DP=440;FS=1.750;HRun=1;HaplotypeScore=54.2038;InbreedingCoeff=0.9715;MQ=84.93;MQ0=0;MQRankSum=-3.013;QD=31.01;ReadPosRankSum=2.510;VQSLOD=3.4331;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:21:54.13:633,54,0	0/0:7,0:7:21.07:0,21,336	0/0:17,0:17:49.41:0,49,761	0/0:16,0:16:42.13:0,42,633	0/0:21,0:21:63.21:0,63,1007	1/1:0,10:10:30.09:360,30,0	1/1:0,13:13:39.12:468,39,0	0/0:32,0:32:96.31:0,96,1494	0/0:10,0:10:30.10:0,30,478	0/0:23,0:23:69.23:0,69,1084	0/0:21,0:21:63.21:0,63,1007	0/0:15,0:15:45.15:0,45,717	1/1:1,13:14:39.12:468,39,0	1/1:0,9:9:27.08:324,27,0	0/0:18,0:18:54.18:0,54,861	0/0:10,0:10:30.10:0,30,477	0/0:15,0:15:45.15:0,45,714	0/0:8,0:8:21.07:0,21,335	0/0:20,0:20:60.19:0,60,937	0/0:22,0:22:66.23:0,66,1053	0/0:10,0:10:30.10:0,30,480	0/0:10,0:10:30.09:0,30,454	0/0:17,0:17:51.17:0,51,813	0/0:6,0:6:18.06:0,18,288	0/0:16,0:16:48.16:0,48,765	0/0:19,0:19:57.19:0,57,912	0/0:38,0:37:99:0,114,1799	0/0:2,0:2:6.02:0,6,92
chr10	80579191	.	CCA	C	2273	PASS	AB=0.933;AC=12;AF=0.214;AN=56;BaseQRankSum=11.437;DP=700;FS=4.151;HRun=0;HaplotypeScore=78.0581;InbreedingCoeff=0.7574;MQ=60.39;MQ0=33;MQRankSum=1.626;QD=12.09;ReadPosRankSum=5.522;VQSLOD=3.0273;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:21:19.97:435,20,0	0/0:10,0:10:27.09:0,27,428	0/1:34,0:9:13.84:14,0,25	0/0:25,0:9:7.68:0,8,65	0/0:34,0:32:87.27:0,87,1355	1/1:4,22:24:36.11:454,36,0	1/1:3,15:16:21.07:265,21,0	0/0:39,0:39:99:0,108,1660	0/0:25,0:24:60.20:0,60,967	0/0:27,0:23:63.21:0,63,1014	0/0:26,0:26:72.25:0,72,1186	0/0:16,0:16:39.13:0,39,617	1/1:4,31:35:60.19:752,60,0	1/1:3,23:24:39.12:492,39,0	0/0:26,0:25:54.18:0,54,875	0/0:17,0:17:47.65:0,48,731	0/0:25,0:23:48.14:0,48,755	0/0:7,0:7:9.03:0,9,130	0/0:22,1:18:10.29:0,10,635	0/0:22,2:24:22.33:0,22,852	0/0:33,1:29:34.37:0,34,1049	0/0:18,0:15:27.09:0,27,440	0/1:22,4:26:41.36:41,0,905	0/0:19,0:18:36.10:0,36,541	0/0:27,1:27:40.18:0,40,1144	0/0:41,1:39:76.62:0,77,1744	0/0:26,0:25:53.94:0,54,1010	0/0:20,0:20:35.35:0,35,817
chr10	80580479	.	C	CA	2090.23	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-2.865;DP=464;FS=1.704;HRun=6;HaplotypeScore=41.1010;InbreedingCoeff=0.9538;MQ=69.22;MQ0=0;MQRankSum=1.150;QD=26.13;ReadPosRankSum=1.058;VQSLOD=3.5155;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:60.19:755,60,0	0/0:5,0:5:12.03:0,12,122	0/0:7,0:7:7.20:0,7,52	0/0:6,0:6:14.98:0,15,141	0/0:32,0:32:87.18:0,87,880	1/1:3,12:15:33.11:415,33,0	1/1:0,11:11:21.07:264,21,0	0/0:31,0:31:87.19:0,87,882	0/0:13,0:13:36.06:0,36,360	0/0:15,0:15:45.09:0,45,454	0/0:21,0:21:60.11:0,60,604	0/0:15,0:15:45.10:0,45,459	1/1:4,14:18:33.11:415,33,0	1/1:1,13:14:33.11:415,33,0	0/0:19,0:19:45.10:0,45,459	0/0:12,0:12:24.05:0,24,245	0/0:16,0:16:45.10:0,45,458	0/0:13,0:13:39.09:0,39,398	0/0:19,0:19:51.11:0,51,520	0/0:28,0:28:72.16:0,72,735	0/0:4,0:4:9.02:0,9,92	0/0:21,0:21:60.14:0,60,612	0/0:19,0:19:57.13:0,57,582	0/0:13,0:13:33.07:0,33,337	0/0:20,0:20:54.10:0,54,542	0/0:26,0:26:78.16:0,78,784	0/0:22,0:22:66.13:0,66,665	0/0:7,0:7:18.04:0,18,184
chr10	80582516	.	A	AAT	2931.39	PASS	AC=48;AF=1.000;AN=48;BaseQRankSum=0.282;DP=158;FS=0.000;HRun=0;HaplotypeScore=140.6855;InbreedingCoeff=-0.0320;MQ=31.26;MQ0=0;MQRankSum=0.577;QD=18.55;ReadPosRankSum=-0.900;VQSLOD=3.6140;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:5:4.81:28,5,0	1/1:1,3:4:11.95:92,12,0	./.	./.	1/1:0,10:15:25.73:189,26,0	1/1:0,4:7:11.97:94,12,0	1/1:1,3:4:11.94:89,12,0	1/1:4,7:11:33.02:342,33,0	1/1:1,3:4:8.97:71,9,0	1/1:1,6:11:22.15:209,22,0	1/1:1,8:9:26.68:193,27,0	1/1:1,3:4:11.95:91,12,0	1/1:1,3:5:14.90:111,15,0	1/1:1,6:7:20.90:158,21,0	1/1:0,2:2:5.98:46,6,0	1/1:0,5:5:14.97:119,15,0	1/1:4,2:6:11.89:84,12,0	./.	1/1:0,2:4:11.49:85,11,0	1/1:4,7:11:29.08:211,29,0	./.	1/1:0,1:2:2.99:23,3,0	1/1:0,5:12:14.94:115,15,0	1/1:3,0:2:5.93:40,6,0	1/1:0,6:6:17.96:142,18,0	1/1:1,10:11:32.95:286,33,0	1/1:0,7:8:20.94:168,21,0	1/1:1,0:2:2.98:21,3,0
chr10	80584195	.	AACACACACACACAC	A	213.55	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=1.682;DP=431;FS=5.154;HRun=0;HaplotypeScore=158.7157;InbreedingCoeff=0.3185;MQ=63.61;MQ0=34;MQRankSum=-2.545;QD=13.35;ReadPosRankSum=1.047;VQSLOD=2.5495;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:9.91:0,10,167	0/0:4,0:3:7.27:0,7,285	0/0:35,0:23:4.26:0,4,63	0/0:27,0:15:3.01:0,3,116	0/0:15,0:15:18.06:0,18,869	1/1:8,8:15:9.03:296,9,0	./.	0/0:23,0:20:23.87:0,24,809	0/0:19,0:18:21.07:0,21,648	0/0:12,0:10:12.04:0,12,407	0/0:12,0:11:3.01:0,3,168	0/0:10,0:9:9.01:0,9,151	0/0:13,0:11:21.05:0,21,445	0/0:17,0:16:27.07:0,27,674	0/0:11,0:11:10.28:0,10,315	0/0:10,0:9:18.06:0,18,805	0/0:17,0:14:18.24:0,18,831	0/0:7,0:6:2.88:0,3,15	0/0:14,0:14:18.06:0,18,785	0/0:11,0:9:18.06:0,18,912	0/0:13,0:10:9.03:0,9,327	0/0:8,0:8:3.01:0,3,167	0/0:13,0:12:6.02:0,6,345	0/0:36,0:35:39.13:0,39,1685	0/0:16,0:16:24.05:0,24,1107	0/0:19,0:18:33.11:0,33,1515	0/0:15,0:14:27.09:0,27,1300	0/0:6,0:4:3.01:0,3,87
chr10	80584239	.	CAGAGAGAG	C	332.91	PASS	AB=0.972;AC=12;AF=0.261;AN=46;BaseQRankSum=0.023;DP=377;FS=13.317;HRun=0;HaplotypeScore=122.8553;InbreedingCoeff=-0.0628;MQ=38.49;MQ0=46;MQRankSum=1.257;QD=2.38;ReadPosRankSum=-0.563;VQSLOD=1.7372;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:6,0:5:1.44:29,1,0	./.	./.	0/1:16,0:15:2.97:68,0,3	0/0:21,0:20:5.62:0,6,111	0/0:11,0:9:2.83:0,3,98	0/0:31,0:28:0:0,0,0	0/1:14,0:13:19.57:20,0,343	0/1:15,0:14:46.68:47,0,88	./.	0/0:12,0:11:11.87:0,12,337	0/0:14,0:12:11.58:0,12,136	0/0:14,0:11:2.68:0,3,94	0/0:12,0:11:4.07:0,4,13	0/0:11,0:10:3.01:0,3,43	0/0:20,0:14:5.04:0,5,79	0/1:9,0:5:8.41:8,0,11	0/1:14,2:15:91.89:112,0,92	0/0:14,0:12:3:0,3,61	1/1:11,0:8:2.50:9,2,0	./.	0/0:10,0:9:3.01:0,3,44	0/0:31,0:30:18.06:0,18,394	0/1:15,0:15:1.28:29,0,1	0/1:16,1:16:28.47:79,0,28	0/1:20,0:19:54.39:54,0,97	0/0:6,0:2:2.90:0,3,17
chr10	80584616	.	AT	A	1884.53	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.896;DP=515;FS=4.231;HRun=9;HaplotypeScore=58.8120;InbreedingCoeff=0.9788;MQ=72.89;MQ0=0;MQRankSum=-3.812;QD=21.17;ReadPosRankSum=1.469;VQSLOD=4.4169;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,7:9:21.01:192,21,0	0/0:6,0:6:18.05:0,18,208	0/0:14,0:14:32.08:0,32,315	0/0:6,0:7:8.89:0,9,133	0/0:26,1:26:50.76:0,51,829	1/1:1,25:26:69.03:632,69,0	1/1:4,14:18:42.02:384,42,0	0/0:23,0:23:63.19:0,63,727	0/0:21,0:21:51.15:0,51,588	0/0:21,1:22:38.73:0,39,700	0/0:19,0:19:54.16:0,54,623	0/0:14,0:14:39.10:0,39,440	1/1:2,10:12:30.01:275,30,0	1/1:1,23:24:63.03:577,63,0	0/0:21,0:21:57.14:0,57,639	0/0:24,0:24:63.19:0,63,727	0/0:22,0:22:57.11:0,57,631	0/0:20,0:20:42.04:0,42,445	0/0:25,0:25:75.21:0,75,855	0/0:19,0:19:51.15:0,51,588	0/0:11,0:11:30.04:0,30,331	0/0:11,0:11:27.08:0,27,312	0/0:19,0:20:56.98:0,57,621	0/0:14,0:14:42.12:0,42,485	0/0:13,1:14:14.63:0,15,403	0/0:25,0:25:72.05:0,72,811	0/0:31,0:31:81.20:0,81,920	0/0:16,0:16:39.10:0,39,441
chr10	80585083	.	T	TATC	565.09	PASS	AB=1.000;AC=5;AF=0.100;AN=50;BaseQRankSum=-3.550;DP=196;FS=4.570;HRun=0;HaplotypeScore=29.0332;InbreedingCoeff=0.4931;MQ=72.80;MQ0=0;MQRankSum=0.247;QD=29.74;ReadPosRankSum=1.917;VQSLOD=2.8327;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:15.05:0,15,245	0/0:2,0:2:6.02:0,6,98	0/1:7,0:5:3.60:4,0,127	./.	0/0:7,0:7:21.07:0,21,343	1/1:1,10:11:27.09:603,27,0	1/1:0,1:1:3.01:67,3,0	0/0:32,0:32:75.23:0,75,1152	0/0:2,0:2:6.02:0,6,98	0/0:1,0:1:3.01:0,3,49	0/0:11,0:11:30.10:0,30,490	0/0:5,0:5:15.05:0,15,237	0/0:4,0:4:9.03:0,9,139	0/0:2,0:2:6.02:0,6,98	0/0:5,0:5:15.05:0,15,245	0/0:2,0:2:6.02:0,6,98	0/0:23,0:23:66.22:0,66,1053	0/0:5,0:5:15.05:0,15,245	0/0:16,0:16:48.15:0,48,735	0/0:12,0:12:36.12:0,36,572	0/0:5,0:5:15.05:0,15,245	./.	0/0:2,0:2:6.02:0,6,90	./.	0/0:5,0:5:15.05:0,15,245	0/0:9,0:9:27.09:0,27,441	0/0:8,0:8:24.08:0,24,383	0/0:8,0:8:21.07:0,21,319
chr10	80586158	.	GTGTGTGTATA	G	2788.07	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.835;DP=272;FS=4.673;HRun=0;HaplotypeScore=79.2737;InbreedingCoeff=0.8890;MQ=72.73;MQ0=2;MQRankSum=-9.179;QD=49.79;ReadPosRankSum=3.227;VQSLOD=2.6460;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:18.06:608,18,0	0/0:5,0:5:12.04:0,12,465	0/0:9,0:7:21.07:0,21,490	0/0:9,0:6:12.47:0,12,221	0/0:11,0:11:24.08:0,24,1059	1/1:0,0:16:36.12:944,36,0	1/1:1,0:8:12.04:288,12,0	0/0:28,0:28:78.27:0,78,2986	0/0:8,0:8:21.07:0,21,834	0/0:9,0:9:27.09:0,27,1139	0/0:12,0:12:30.10:0,30,1276	0/0:6,0:6:18.06:0,18,745	1/1:1,13:14:18.06:609,18,0	1/1:0,10:10:15.05:508,15,0	0/0:8,0:8:24.08:0,24,968	0/0:5,0:5:15.05:0,15,665	0/0:17,0:17:48.14:0,48,1943	0/0:5,0:5:12.04:0,12,571	0/0:14,0:14:42.13:0,42,1516	0/0:8,0:8:24.08:0,24,1107	0/0:4,0:4:12.02:0,12,500	0/0:3,0:3:9.03:0,9,423	0/0:5,0:5:12.04:0,12,347	0/0:9,0:9:27.09:0,27,1061	0/0:5,0:5:15.05:0,15,748	0/0:16,0:16:48.16:0,48,2243	0/0:18,0:18:48.15:0,48,2258	0/0:1,0:1:3.01:0,3,105
chr10	80586164	.	GTA	G	678.07	PASS	AB=0.852;AC=23;AF=0.442;AN=52;BaseQRankSum=9.127;DP=268;FS=3.996;HRun=0;HaplotypeScore=44.7877;InbreedingCoeff=0.0644;MQ=69.79;MQ0=2;MQRankSum=-3.605;QD=4.13;ReadPosRankSum=1.312;VQSLOD=1.7163;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:17.08:85,17,0	0/1:4,1:5:23.97:24,0,84	./.	0/0:9,0:5:2.74:0,3,12	0/1:10,1:11:17.89:18,0,217	1/1:16,0:16:34.09:167,34,0	1/1:7,0:7:8.52:42,9,0	0/0:29,0:29:0.93:0,1,556	0/1:6,1:7:23.91:24,0,132	0/0:9,0:9:15.04:0,15,220	0/1:11,2:13:44.87:45,0,261	0/1:5,1:6:23.94:24,0,132	1/1:14,0:14:17.04:84,17,0	1/1:10,0:10:14.20:71,14,0	0/1:6,2:8:53.92:54,0,133	0/0:5,0:5:12.03:0,12,169	0/1:14,4:18:35.84:36,0,369	0/0:5,0:5:9.03:0,9,144	0/0:13,0:13:21.05:0,21,274	0/1:8,0:8:3.58:4,0,256	0/0:3,0:3:9.02:0,9,121	0/1:2,1:3:26.92:27,0,87	1/1:2,3:5:6.02:72,6,0	0/1:7,0:9:7.22:7,0,219	0/0:6,0:6:15.04:0,15,218	0/1:13,3:16:65.91:66,0,443	0/0:16,0:16:36.11:0,36,552	./.
chr10	80586483	.	CT	C	5514.55	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=16.198;DP=562;FS=5.679;HRun=1;HaplotypeScore=65.5261;InbreedingCoeff=0.9697;MQ=89.51;MQ0=0;MQRankSum=-5.523;QD=38.56;ReadPosRankSum=3.887;VQSLOD=5.5210;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,50:50:99:2005,144,0	0/0:3,0:3:9.02:0,9,119	0/0:20,0:20:57.19:0,57,911	0/0:22,0:22:57.10:0,57,779	0/0:23,0:23:69.20:0,69,1055	1/1:0,25:25:66.22:920,66,0	1/1:0,17:17:48.16:668,48,0	0/0:26,0:26:75.26:0,75,1198	0/0:15,0:15:45.13:0,45,673	0/0:17,0:17:51.16:0,51,777	0/0:17,0:17:51.16:0,51,791	0/0:17,0:17:51.15:0,51,768	1/1:0,29:29:87.29:1212,87,0	1/1:0,22:22:51.17:710,51,0	0/0:27,0:27:81.24:0,81,1223	0/0:26,0:26:78.26:0,78,1221	0/0:22,0:22:63.20:0,63,981	0/0:9,0:9:21.03:0,21,307	0/0:30,0:30:90.28:0,90,1391	0/0:14,0:14:36.11:0,36,549	0/0:34,0:34:99:0,102,1579	0/0:7,0:7:21.07:0,21,333	0/0:6,0:6:18.06:0,18,284	0/0:22,0:22:66.23:0,66,1053	0/0:13,0:13:39.13:0,39,622	0/0:14,0:14:42.13:0,42,626	0/0:32,0:32:96.33:0,96,1532	0/0:3,0:3:9.03:0,9,144
chr10	80586937	.	CT	C	1970.48	PASS	AB=0.929;AC=11;AF=0.196;AN=56;BaseQRankSum=10.144;DP=538;FS=7.195;HRun=10;HaplotypeScore=54.5275;InbreedingCoeff=0.8825;MQ=66.55;MQ0=0;MQRankSum=2.296;QD=16.56;ReadPosRankSum=-0.213;VQSLOD=3.7517;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:68.99:599,69,0	0/0:9,0:9:5.19:0,5,244	0/1:12,1:11:5.02:5,0,152	0/0:8,1:10:17.95:0,18,160	0/0:23,0:23:42.40:0,42,495	1/1:4,18:22:50.98:443,51,0	1/1:3,10:13:26.99:234,27,0	0/0:36,1:38:54.99:0,55,811	0/0:11,0:11:21.06:0,21,232	0/0:17,0:17:39.11:0,39,431	0/0:18,0:18:54.14:0,54,591	0/0:12,0:12:33.08:0,33,358	1/1:1,16:18:47.03:397,47,0	1/1:2,22:24:53.98:469,54,0	0/0:19,0:20:30.38:0,30,491	0/0:16,0:16:45.12:0,45,498	0/0:19,0:19:51.14:0,51,564	0/0:11,0:11:21.06:0,21,232	0/0:18,1:19:19.07:0,19,439	0/0:20,0:20:54.15:0,54,597	0/0:26,0:27:75.19:0,75,822	0/0:14,0:14:33.09:0,33,365	0/0:17,0:17:39.10:0,39,430	0/0:18,0:18:51.10:0,51,545	0/0:19,0:19:48.12:0,48,525	0/0:33,0:33:78.17:0,78,839	0/0:22,0:23:63:0,63,677	0/0:25,0:25:66.18:0,66,730
chr10	80589082	.	GTATATATATATATATATATATATATATATATATATATATATATATA	G	370.09	PASS	AC=6;AF=0.188;AN=32;BaseQRankSum=-0.206;DP=124;FS=21.756;HRun=0;HaplotypeScore=115.0514;InbreedingCoeff=0.3290;MQ=72.44;MQ0=3;MQRankSum=-0.324;QD=14.80;ReadPosRankSum=-0.029;VQSLOD=0.4929;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:12,0:4:3.01:0,3,79	0/0:5,0:5:3.01:0,3,122	1/1:4,8:12:3.01:345,3,0	1/1:2,0:2:3:27,3,0	0/0:11,0:10:15.05:0,15,1022	./.	./.	0/0:6,0:6:3.01:0,3,100	./.	1/1:11,0:10:6.01:95,6,0	./.	./.	0/0:1,0:1:3:0,3,26	0/0:11,0:11:24.03:0,24,1955	0/0:1,0:1:3.01:0,3,285	0/0:5,0:5:3.01:0,3,92	0/0:4,0:4:9:0,9,139	./.	./.	./.	0/0:2,0:2:3.01:0,3,121	./.	0/0:2,0:2:2.68:0,3,11	0/0:5,0:5:6.01:0,6,74	0/0:3,0:3:3.01:0,3,414
chr10	80589526	.	CT	C	3577.71	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.682;DP=427;FS=0.917;HRun=2;HaplotypeScore=42.4163;InbreedingCoeff=0.9752;MQ=90.88;MQ0=0;MQRankSum=-2.769;QD=34.40;ReadPosRankSum=1.724;VQSLOD=3.4505;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:40:99:1479,114,0	0/0:5,0:5:15.05:0,15,225	0/0:16,0:15:42.13:0,42,597	0/0:22,0:22:60.17:0,60,834	0/0:14,0:14:39.13:0,39,571	1/1:1,23:24:66.21:856,66,0	1/1:0,11:11:21.07:273,21,0	0/0:22,0:22:60.20:0,60,900	0/0:18,0:18:54.18:0,54,807	0/0:21,0:21:60.20:0,60,899	0/0:16,0:16:48.14:0,48,681	0/0:13,0:13:39.12:0,39,566	1/1:0,14:14:36.12:467,36,0	1/1:0,15:15:39.13:503,39,0	0/0:16,0:16:48.16:0,48,719	0/0:10,0:10:30.10:0,30,450	0/0:15,0:15:45.15:0,45,671	0/0:7,0:7:15.02:0,15,202	0/0:25,0:25:75.24:0,75,1104	0/0:10,0:10:30.09:0,30,430	0/0:17,0:17:51.17:0,51,763	0/0:3,0:3:9.03:0,9,134	0/0:6,0:6:18.06:0,18,270	0/0:18,0:17:54.14:0,54,747	0/0:10,0:10:30.09:0,30,431	0/0:13,0:13:39.12:0,39,548	0/0:19,0:19:57.17:0,57,814	0/0:7,0:7:21.05:0,21,294
chr10	80590454	.	A	ATTGT	6269.22	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-2.175;DP=486;FS=6.688;HRun=0;HaplotypeScore=77.8238;InbreedingCoeff=0.9949;MQ=75.04;MQ0=0;MQRankSum=-4.072;QD=56.99;ReadPosRankSum=1.936;VQSLOD=6.3486;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,12:16:39.13:896,39,0	0/0:5,0:5:15.05:0,15,263	0/0:15,0:15:42.10:0,42,662	0/0:18,0:18:36.12:0,36,605	0/0:18,0:18:42.14:0,42,735	1/1:2,30:33:81.28:2067,81,0	1/1:2,14:19:39.13:987,39,0	0/0:15,0:15:42.14:0,42,709	0/0:17,0:17:48.14:0,48,781	0/0:19,0:19:45.15:0,45,787	0/0:17,0:17:51.17:0,51,893	0/0:17,0:17:51.15:0,51,838	1/1:5,19:24:54.19:1375,54,0	1/1:2,15:17:39.12:944,39,0	0/0:17,0:17:42.14:0,42,731	0/0:12,0:12:36.12:0,36,622	0/0:12,0:12:33.10:0,33,550	0/0:11,0:11:27.54:0,28,443	0/0:20,0:20:54.17:0,54,920	0/0:31,0:31:72.22:0,72,1230	0/0:12,0:12:35.71:0,36,587	0/0:16,0:16:45.15:0,45,762	0/0:23,0:23:63.22:0,63,1089	0/0:14,0:14:39.05:0,39,612	0/0:16,0:16:45.15:0,45,783	0/0:15,0:15:36.12:0,36,628	0/0:27,0:26:69.22:0,69,1171	0/0:9,0:9:21.06:0,21,340
chr10	80590543	.	A	AC	325.76	PASS	AB=0.847;AC=5;AF=0.089;AN=56;BaseQRankSum=4.503;DP=472;FS=5.509;HRun=0;HaplotypeScore=79.1145;InbreedingCoeff=-0.0100;MQ=62.68;MQ0=10;MQRankSum=-2.593;QD=5.01;ReadPosRankSum=4.430;VQSLOD=2.7446;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:13,2:14:57.87:129,0,58	0/0:6,0:6:14.99:0,15,132	0/0:33,0:9:20.52:0,21,151	0/0:34,0:9:7.52:0,8,138	0/0:31,0:29:86.92:0,87,791	0/1:12,1:13:28.46:28,0,49	0/1:12,3:15:45.64:149,0,46	0/0:17,0:17:37.25:0,37,307	0/0:21,0:21:58.46:0,58,488	0/0:22,0:21:62.58:0,63,578	0/0:15,0:15:39:0,39,353	0/0:17,0:17:41.07:0,41,334	0/1:4,2:6:4.60:47,0,5	0/1:13,3:16:59.92:90,0,60	0/0:13,0:13:32.18:0,32,292	0/0:9,0:9:27.03:0,27,293	0/0:15,0:14:33.26:0,33,330	0/0:13,0:13:24.90:0,25,263	0/0:27,0:26:74.74:0,75,702	0/0:24,0:23:62.72:0,63,487	0/0:5,0:4:11.96:0,12,98	0/0:8,0:8:23.93:0,24,202	0/0:21,0:21:56.92:0,57,493	0/0:12,0:12:32.96:0,33,306	0/0:17,0:17:43.49:0,43,376	0/0:22,0:21:53:0,53,534	0/0:22,0:22:65.86:0,66,613	0/0:3,0:3:9:0,9,79
chr10	80590546	.	AAAAAC	A	1735.11	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.308;DP=478;FS=15.736;HRun=0;HaplotypeScore=107.7170;InbreedingCoeff=0.8674;MQ=63.34;MQ0=13;MQRankSum=-5.605;QD=26.69;ReadPosRankSum=0.017;VQSLOD=2.4678;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,3:14:40.54:377,41,0	0/0:6,0:6:16.84:0,17,265	0/0:31,0:8:7.20:0,7,90	0/0:37,0:12:8.98:0,9,180	0/0:30,0:28:64.78:0,65,1000	1/1:8,6:14:38.94:477,39,0	1/1:10,4:14:4.80:401,5,0	0/0:17,0:17:6.54:0,7,447	0/0:21,0:21:58.66:0,59,951	0/0:22,0:21:42.86:0,43,620	0/0:15,0:15:33.85:0,34,558	0/0:17,0:17:15.10:0,15,376	1/1:5,2:7:17.50:223,18,0	1/1:9,6:15:37.27:423,37,0	0/0:13,0:13:29.53:0,30,478	0/0:8,0:8:20.40:0,20,385	0/0:15,0:14:30.13:0,30,442	0/0:13,0:13:21.47:0,21,385	0/0:27,0:25:29.24:0,29,917	0/0:26,0:25:54.03:0,54,898	0/0:7,0:4:4.72:0,5,32	0/0:8,0:8:13.81:0,14,167	0/0:20,0:20:43.02:0,43,463	0/0:13,0:13:19.24:0,19,386	0/0:18,0:18:21.72:0,22,672	0/0:22,0:21:44.49:0,44,770	0/0:22,0:22:21.63:0,22,832	0/0:5,0:5:14.71:0,15,195
chr10	80590572	.	AAAAC	A	1619.75	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.448;DP=475;FS=3.951;HRun=0;HaplotypeScore=99.7783;InbreedingCoeff=0.9488;MQ=61.81;MQ0=11;MQRankSum=-8.006;QD=21.89;ReadPosRankSum=0.510;VQSLOD=3.2694;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:14:28.94:159,29,0	0/0:6,0:6:11.77:0,12,295	0/0:19,0:5:15.04:0,15,214	0/0:25,0:13:22.59:0,23,224	0/0:29,0:28:75.56:0,76,1446	1/1:10,8:18:45.11:696,45,0	1/1:1,12:13:15.09:497,15,0	0/0:19,0:19:46.41:0,46,1010	0/0:22,0:22:57.34:0,57,1151	0/0:27,0:26:60.02:0,60,1177	0/0:18,0:18:45.08:0,45,1001	0/0:17,0:17:22.45:0,22,791	1/1:8,1:9:24.59:171,25,0	1/1:18,1:19:40.89:270,41,0	0/0:15,0:15:40.71:0,41,627	0/0:9,0:9:27.09:0,27,607	0/0:17,0:16:45.07:0,45,771	0/0:14,0:14:33.11:0,33,724	0/0:29,0:28:75.06:0,75,1644	0/0:23,0:22:41.54:0,42,924	0/0:6,0:3:9.03:0,9,184	0/0:9,0:9:6.78:0,7,427	0/0:15,0:15:39.03:0,39,850	0/0:11,0:11:27.06:0,27,501	0/0:23,0:23:62.14:0,62,1380	0/0:17,0:17:31.71:0,32,626	0/0:23,0:23:63.03:0,63,1193	0/0:8,0:8:24.08:0,24,548
chr10	80590573	.	AAAC	A	2058.66	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.222;DP=476;FS=0.000;HRun=0;HaplotypeScore=89.1758;InbreedingCoeff=0.9493;MQ=63.12;MQ0=11;MQRankSum=-8.358;QD=27.82;ReadPosRankSum=-0.799;VQSLOD=3.2399;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,12:14:35.99:496,36,0	0/0:6,0:6:11.66:0,12,243	0/0:20,0:7:20.96:0,21,237	0/0:25,0:13:13.03:0,13,195	0/0:30,0:29:61.37:0,61,1166	1/1:18,0:18:45.02:414,45,0	1/1:13,0:13:27.32:279,27,0	0/0:20,0:20:48.44:0,48,895	0/0:22,0:22:49.25:0,49,924	0/0:26,0:25:59.93:0,60,1000	0/0:18,0:18:43.57:0,44,812	0/0:17,0:17:21.51:0,22,620	1/1:5,4:9:27.08:371,27,0	1/1:11,8:19:53.83:674,54,0	0/0:16,0:16:28.16:0,28,507	0/0:9,0:9:27.08:0,27,493	0/0:17,0:16:42.59:0,43,581	0/0:13,0:13:33.11:0,33,590	0/0:29,0:28:74.89:0,75,1372	0/0:23,0:22:40.22:0,40,738	0/0:6,0:3:9.03:0,9,160	0/0:9,0:9:6.66:0,7,336	0/0:16,0:16:41.99:0,42,726	0/0:11,0:11:27.05:0,27,404	0/0:22,0:22:60.86:0,61,1116	0/0:17,0:17:31.32:0,31,478	0/0:22,0:22:58.80:0,59,971	0/0:8,0:8:24.07:0,24,449
chr10	80592314	.	CTCTCTG	C	993.18	PASS	AB=0.964;AC=5;AF=0.100;AN=50;BaseQRankSum=6.542;DP=767;FS=1.984;HRun=0;HaplotypeScore=163.9318;InbreedingCoeff=0.7466;MQ=70.75;MQ0=14;MQRankSum=-7.219;QD=12.57;ReadPosRankSum=0.324;VQSLOD=2.8387;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:12,0:12:24.08:0,24,700	./.	./.	0/0:22,0:22:29.82:0,30,782	0/0:31,0:36:26.59:0,27,355	0/0:16,0:16:8.61:0,9,88	0/0:50,0:46:48.60:0,49,650	0/0:23,0:23:45.15:0,45,1432	0/0:27,0:27:38.71:0,39,951	0/0:18,0:18:27.09:0,27,847	0/0:32,0:32:57.17:0,57,1681	1/1:19,13:32:27.09:551,27,0	1/1:8,12:20:27.09:552,27,0	0/0:29,0:29:57.20:0,57,1570	0/0:24,0:24:48.15:0,48,1108	0/0:23,0:23:44.92:0,45,1326	0/0:14,0:14:27.05:0,27,623	0/0:20,0:19:18.01:0,18,435	0/1:26,1:27:16.14:16,0,984	0/0:33,0:33:45.13:0,45,1038	0/0:14,0:13:18.05:0,18,481	0/0:23,0:23:42.06:0,42,1037	0/0:45,0:45:69.14:0,69,1904	0/0:21,0:21:48.16:0,48,1307	0/0:27,0:27:66.21:0,66,1725	0/0:30,0:30:60.21:0,60,1703	0/0:13,0:13:15.05:0,15,385
chr10	80592366	.	CTGTCCT	C	128.19	PASS	AB=0.856;AC=2;AF=0.036;AN=56;BaseQRankSum=4.723;DP=702;FS=2.973;HRun=0;HaplotypeScore=145.8754;InbreedingCoeff=-0.0472;MQ=55.39;MQ0=35;MQRankSum=-3.214;QD=3.20;ReadPosRankSum=-0.147;VQSLOD=2.7760;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:13:20.17:0,20,411	0/0:13,0:13:39.13:0,39,1242	0/0:48,0:8:18.02:0,18,334	0/0:79,0:18:30.02:0,30,714	0/0:21,0:21:54.86:0,55,1684	0/1:16,7:22:99:160,0,481	0/0:12,0:12:12.51:0,13,308	0/0:39,0:37:99:0,108,2895	0/0:27,0:27:78.71:0,79,2449	0/0:30,0:29:84.28:0,84,2687	0/0:21,0:21:63.20:0,63,1907	0/0:25,0:25:69.22:0,69,2054	0/0:19,0:19:36.12:0,36,615	0/0:17,0:17:45.06:0,45,678	0/0:27,0:27:75.24:0,75,2343	0/0:20,0:20:60.19:0,60,1978	0/0:21,0:21:55.74:0,56,1618	0/1:16,0:16:56.33:56,0,964	0/0:20,0:19:51.16:0,51,1347	0/0:25,0:25:66.23:0,66,2124	0/0:31,0:30:87.30:0,87,2795	0/0:17,0:17:51.18:0,51,1700	0/0:20,0:20:60.19:0,60,1790	0/0:36,0:35:93.27:0,93,2990	0/0:18,0:18:51.17:0,51,1600	0/0:32,0:32:96.32:0,96,3159	0/0:23,0:23:66.23:0,66,2137	0/0:6,0:6:1.01:0,1,393
chr10	80592578	.	GT	G	2812.37	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.134;DP=572;FS=0.885;HRun=5;HaplotypeScore=54.0892;InbreedingCoeff=0.9990;MQ=79.91;MQ0=0;MQRankSum=-2.546;QD=28.41;ReadPosRankSum=0.702;VQSLOD=3.7906;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:60.17:679,60,0	0/0:8,0:8:24.08:0,24,328	0/0:14,0:14:30.10:0,30,401	0/0:15,0:15:38.85:0,39,442	0/0:33,0:33:96.31:0,96,1296	1/1:0,19:19:57.16:644,57,0	1/1:1,22:23:63.18:715,63,0	0/0:35,0:35:99:0,99,1348	0/0:11,0:11:33.11:0,33,451	0/0:20,0:20:54.17:0,54,724	0/0:31,0:31:81.27:0,81,1107	0/0:17,0:17:48.16:0,48,655	1/1:0,19:19:48.13:542,48,0	1/1:0,13:13:36.10:408,36,0	0/0:22,0:22:66.21:0,66,886	0/0:16,0:16:48.16:0,48,657	0/0:26,0:26:72.24:0,72,984	0/0:9,0:9:27.09:0,27,368	0/0:21,0:21:60.20:0,60,821	0/0:26,0:26:78.26:0,78,1067	0/0:18,0:18:51.15:0,51,681	0/0:21,0:21:63.21:0,63,852	0/0:22,0:22:66.22:0,66,900	0/0:16,0:16:45.15:0,45,616	0/0:22,0:22:63.19:0,63,843	0/0:26,0:25:69.23:0,69,941	0/0:29,0:28:84.28:0,84,1148	0/0:15,0:15:39.10:0,39,499
chr10	80592736	.	CT	C	733.25	PASS	AB=0.767;AC=8;AF=0.143;AN=56;BaseQRankSum=2.047;DP=380;FS=1.469;HRun=1;HaplotypeScore=61.0867;InbreedingCoeff=0.6405;MQ=83.90;MQ0=0;MQRankSum=-1.240;QD=10.18;ReadPosRankSum=0.186;VQSLOD=1.3831;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,5:21:26.51:218,27,0	0/0:3,0:3:3.48:0,3,49	0/0:22,0:19:56.37:0,56,510	0/0:24,0:23:13.64:0,14,368	0/0:14,0:14:29.95:0,30,328	1/1:7,1:8:5.05:87,5,0	0/1:15,0:15:4.96:125,0,5	0/0:15,0:15:30.03:0,30,348	0/0:4,0:4:12.03:0,12,166	0/0:12,0:12:32.09:0,32,312	0/0:19,0:19:42.12:0,42,611	0/0:12,0:12:27.05:0,27,331	1/1:6,6:12:23.98:266,24,0	0/1:2,14:16:29.34:183,0,29	0/0:16,0:16:29.29:0,29,382	0/0:14,0:14:33.07:0,33,454	0/0:23,0:23:57:0,57,713	0/0:6,0:6:15.03:0,15,192	0/0:14,0:14:22.28:0,22,320	0/0:19,0:19:48.06:0,48,579	0/0:13,0:13:29.15:0,29,324	0/0:8,0:8:16.57:0,17,236	0/0:11,0:11:20.96:0,21,227	0/0:13,0:13:28.43:0,28,391	0/0:15,0:15:21.63:0,22,265	0/0:10,0:10:18.05:0,18,231	0/0:18,0:18:30.95:0,31,396	0/0:3,0:3:9:0,9,96
chr10	80592818	.	GCACATGCACACAACACA	G	716.06	PASS	AB=1.000;AC=5;AF=0.096;AN=52;BaseQRankSum=2.753;DP=422;FS=2.650;HRun=0;HaplotypeScore=139.5503;InbreedingCoeff=0.4716;MQ=55.06;MQ0=47;MQRankSum=-2.753;QD=17.90;ReadPosRankSum=-1.542;VQSLOD=2.2886;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:3,0:3:9.03:0,9,252	0/0:43,0:23:57.19:0,57,1403	0/0:42,0:20:44.82:0,45,1264	0/0:10,0:9:3.01:0,3,121	1/1:4,13:17:15.05:693,15,0	1/1:10,0:7:8.97:98,9,0	0/0:19,0:13:27.77:0,28,322	0/0:14,0:14:36.12:0,36,2051	0/0:8,0:6:12.04:0,12,288	0/0:9,0:8:3.01:0,3,122	0/0:21,0:21:63.22:0,63,2721	0/0:15,0:13:12.02:0,12,155	0/0:10,0:8:3:0,3,28	0/0:15,0:13:14.95:0,15,608	0/0:13,0:12:18.04:0,18,518	0/0:16,0:14:12.03:0,12,317	./.	0/1:11,0:10:41.89:42,0,364	0/0:7,0:4:6.16:0,6,94	0/0:12,0:8:4.09:0,4,45	0/0:11,0:11:30.10:0,30,1490	0/0:12,0:12:33.11:0,33,1823	0/0:23,0:22:48.49:0,48,2899	0/0:18,0:16:11.71:0,12,404	0/0:18,0:10:27.49:0,27,376	0/0:15,0:13:11.54:0,12,219	0/0:4,0:4:11.80:0,12,275
chr10	80592821	.	CATGCACACA	C	1039.69	PASS	AB=1.000;AC=17;AF=0.327;AN=52;BaseQRankSum=6.592;DP=421;FS=0.000;HRun=0;HaplotypeScore=99.1156;InbreedingCoeff=0.2449;MQ=53.20;MQ0=47;MQRankSum=-6.291;QD=7.27;ReadPosRankSum=-1.019;VQSLOD=1.5520;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:3,0:3:6.05:6,0,59	0/0:40,0:20:57.19:0,57,1403	0/0:39,0:17:45.09:0,45,1262	0/0:10,0:9:2.97:0,3,20	1/1:19,0:17:15.05:357,15,0	1/1:10,0:7:8.97:98,9,0	0/1:18,0:12:53.43:53,0,224	0/0:14,0:14:36.12:0,36,1342	1/1:8,0:6:3.34:36,3,0	0/0:8,0:7:2.97:0,3,20	0/0:23,0:23:63.22:0,63,2053	1/1:4,12:14:12.04:334,12,0	1/1:5,8:10:3.01:95,3,0	0/0:15,0:13:14.82:0,15,100	0/0:12,0:11:3.07:0,3,118	0/1:15,0:13:18.34:18,0,76	./.	0/1:12,0:11:76.40:76,0,97	0/1:7,0:4:6.41:9,0,6	0/0:13,0:9:5.75:0,6,48	0/0:11,0:11:30.10:0,30,971	0/0:13,0:13:38.96:0,39,1252	0/0:25,0:24:54.46:0,54,1908	0/0:18,0:16:11.81:0,12,105	0/1:18,0:10:52.14:52,0,138	0/0:14,0:12:11.39:0,11,118	0/1:4,0:4:27.93:66,0,28
chr10	80592822	.	ATG	A	97.72	PASS	AB=0.969;AC=8;AF=0.154;AN=52;BaseQRankSum=5.403;DP=416;FS=5.703;HRun=0;HaplotypeScore=71.8088;InbreedingCoeff=0.5123;MQ=53.01;MQ0=47;MQRankSum=-3.442;QD=1.40;ReadPosRankSum=-0.761;VQSLOD=0.9835;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:3,0:3:8.89:0,9,85	0/0:39,0:19:57.20:0,57,1122	0/0:39,0:17:44.89:0,45,868	0/0:11,0:10:2.94:0,3,18	1/1:16,3:17:14.70:96,15,0	1/1:4,6:7:8.73:60,9,0	0/0:18,0:12:37.18:0,37,537	0/0:14,0:14:36.12:0,36,729	0/0:8,0:6:12:0,12,121	0/0:8,0:7:3.01:0,3,34	0/0:23,0:23:63.22:0,63,1255	0/1:14,1:13:10.87:48,0,11	1/1:9,4:10:2.97:20,3,0	0/0:14,0:12:14.96:0,15,184	0/0:12,0:11:18:0,18,206	0/0:15,0:13:11.22:0,11,115	./.	0/0:12,0:11:24.23:0,24,293	0/0:7,0:4:6:0,6,74	0/0:13,0:9:4.68:0,5,71	0/0:11,0:11:29.44:0,29,501	0/1:13,0:13:0.46:0,0,664	0/0:25,0:24:54.02:0,54,1018	0/0:17,0:15:12:0,12,127	0/0:18,0:10:20.80:0,21,378	0/0:14,0:12:12.01:0,12,137	0/0:4,0:4:11.60:0,12,95
chr10	80592824	.	GCACACAA	G	2079.69	PASS	AB=1.000;AC=37;AF=0.685;AN=54;BaseQRankSum=8.416;DP=421;FS=5.875;HRun=0;HaplotypeScore=86.3254;InbreedingCoeff=0.7262;MQ=48.64;MQ0=49;MQRankSum=-5.140;QD=8.89;ReadPosRankSum=0.861;VQSLOD=1.4231;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,1:3:5.93:93,6,0	0/0:36,0:16:36.10:0,36,464	0/0:37,0:15:38.86:0,39,518	1/1:14,0:12:2.92:17,3,0	1/1:19,0:17:15.05:245,15,0	1/1:8,0:5:1.53:4,2,0	1/1:17,0:11:26.91:301,27,0	0/0:15,0:15:39.10:0,39,877	1/1:3,6:7:12.04:264,12,0	1/1:11,1:10:2.90:17,3,0	0/0:23,0:23:57.19:0,57,1142	1/1:15,0:13:9.50:139,10,0	1/1:13,0:10:3.01:46,3,0	1/1:15,0:13:14.62:87,15,0	1/1:10,1:10:11.87:141,12,0	1/1:16,0:14:8.79:52,9,0	0/0:7,0:6:0.47:0,0,1	1/1:10,2:11:21.87:319,22,0	1/1:6,1:4:5.71:113,6,0	0/1:12,0:8:0.50:1,0,0	0/0:14,0:14:36.12:0,36,931	0/0:13,0:13:39.13:0,39,952	0/0:26,0:25:50.95:0,51,1407	1/1:15,2:15:8.79:53,9,0	1/1:17,1:10:23.86:297,24,0	1/1:12,0:10:3.40:18,3,0	1/1:4,0:4:9.24:54,9,0
chr10	80592825	.	CACACA	C	2743.48	PASS	AB=0.833;AC=36;AF=0.667;AN=54;BaseQRankSum=7.279;DP=424;FS=5.753;HRun=0;HaplotypeScore=77.3696;InbreedingCoeff=0.6618;MQ=48.55;MQ0=49;MQRankSum=-4.945;QD=11.72;ReadPosRankSum=1.433;VQSLOD=2.0361;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,1:3:6.02:105,6,0	0/0:36,0:16:36.10:0,36,465	0/0:37,0:15:38.86:0,39,518	1/1:2,12:12:3.01:62,3,0	1/1:19,0:17:15.04:176,15,0	1/1:8,0:5:1.53:4,2,0	1/1:17,0:11:27.09:343,27,0	0/0:16,0:16:39.10:0,39,710	1/1:8,1:7:12.04:167,12,0	1/1:4,8:10:2.96:62,3,0	0/0:22,0:22:57.19:0,57,990	1/1:15,0:13:11.06:116,11,0	1/1:13,0:10:3.01:37,3,0	1/1:2,13:13:15.05:311,15,0	1/1:4,7:10:12.04:229,12,0	1/1:2,13:13:9.03:186,9,0	0/0:2,5:6:0:0,0,0	1/1:4,8:11:22.31:303,22,0	1/1:7,0:4:5.91:81,6,0	0/1:12,0:8:0.19:1,0,0	0/0:14,0:14:36.12:0,36,826	0/0:13,0:13:39.13:0,39,834	0/0:28,0:27:49.91:0,50,1171	1/1:5,12:15:9.03:186,9,0	1/1:18,0:10:24.08:308,24,0	1/1:2,9:9:3.01:63,3,0	0/1:3,3:6:43.37:186,0,43
chr10	80592829	.	CA	C	1327.16	PASS	AB=0.978;AC=35;AF=0.648;AN=54;BaseQRankSum=8.258;DP=431;FS=6.766;HRun=2;HaplotypeScore=68.0415;InbreedingCoeff=0.6013;MQ=47.52;MQ0=50;MQRankSum=-5.042;QD=5.67;ReadPosRankSum=1.555;VQSLOD=0.6580;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,0:2:5.78:30,6,0	0/0:33,0:13:36.10:0,36,465	0/0:36,0:14:38.86:0,39,518	0/1:16,0:14:12.05:30,0,12	1/1:17,2:17:11.88:57,12,0	1/1:6,4:6:0.31:1,0,0	1/1:4,11:10:27.09:343,27,0	0/0:16,0:16:38.55:0,39,468	1/1:9,0:7:11.75:91,12,0	1/1:12,0:10:2.90:16,3,0	0/0:22,0:22:57.18:0,57,766	1/1:15,0:13:10.98:51,11,0	0/1:13,1:11:2.52:6,0,3	1/1:15,0:13:14.51:78,15,0	1/1:11,1:10:11.58:62,12,0	1/1:15,1:14:8.71:47,9,0	1/1:7,1:7:0.47:1,0,0	1/1:11,0:10:22.73:204,23,0	1/1:2,6:5:5.88:53,6,0	0/0:5,6:8:0.55:0,1,2	0/0:14,0:14:35.61:0,36,479	0/0:13,0:13:38.72:0,39,521	0/0:29,0:28:52.51:0,53,676	1/1:14,2:14:8.68:47,9,0	1/1:4,13:9:24.07:297,24,0	1/1:10,1:9:2.90:16,3,0	0/1:8,0:8:46.43:79,0,46
chr10	80592830	.	A	AC	904.03	PASS	AB=0.938;AC=27;AF=0.500;AN=54;BaseQRankSum=6.036;DP=451;FS=0.732;HRun=1;HaplotypeScore=78.5923;InbreedingCoeff=0.4852;MQ=46.98;MQ0=50;MQRankSum=-3.085;QD=4.39;ReadPosRankSum=0.257;VQSLOD=0.1992;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,0:2:1.36:2,1,0	0/0:32,0:12:36.10:0,36,465	0/0:36,0:14:38.86:0,39,518	0/1:17,1:17:14.07:18,0,14	0/1:18,2:18:9.55:19,0,10	0/0:7,3:6:0.88:0,1,2	1/1:15,3:12:9.52:347,10,0	0/0:12,0:16:38.99:0,39,468	1/1:7,2:7:7.35:63,7,0	1/1:12,2:12:0.86:2,1,0	0/0:22,0:22:56.40:0,56,732	0/0:14,2:14:1.54:0,2,5	0/0:11,3:11:3.46:0,3,10	1/1:16,2:16:7.11:19,7,0	1/1:11,0:9:4.06:9,4,0	1/1:17,1:16:6.76:44,7,0	0/0:8,1:8:0.79:0,1,4	1/1:12,0:11:18.97:169,19,0	1/1:8,1:6:3.95:39,4,0	0/0:11,1:8:1.71:0,2,4	0/0:12,0:13:36.10:0,36,464	0/0:13,0:13:36.12:0,36,492	0/0:26,0:28:53.33:0,53,674	1/1:17,0:15:2.66:5,3,0	1/1:15,3:10:21.95:269,22,0	1/1:11,1:10:0.89:2,1,0	0/1:9,0:9:50.52:59,0,51
chr10	80593032	.	A	AGCATT	5878.22	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-9.409;DP=473;FS=7.911;HRun=0;HaplotypeScore=81.2766;InbreedingCoeff=0.9963;MQ=87.37;MQ0=0;MQRankSum=-5.618;QD=80.52;ReadPosRankSum=1.881;VQSLOD=7.0312;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:13:33.11:1032,33,0	0/0:7,0:7:21.07:0,21,442	0/0:21,0:21:57.16:0,57,1119	0/0:16,0:15:39.13:0,39,812	0/0:22,0:22:60.19:0,60,1296	1/1:1,17:19:51.18:1646,51,0	1/1:2,7:10:21.07:664,21,0	0/0:29,0:29:87.29:0,87,1800	0/0:15,0:15:45.15:0,45,1003	0/0:18,0:18:51.18:0,51,1138	0/0:30,0:30:90.31:0,90,1952	0/0:12,0:12:33.11:0,33,735	1/1:2,15:19:48.13:1472,48,0	1/1:3,9:12:33.11:1064,33,0	0/0:29,0:29:78.27:0,78,1739	0/0:15,0:15:45.15:0,45,1003	0/0:15,0:15:45.15:0,45,993	0/0:7,0:7:21.07:0,21,448	0/0:25,0:25:75.24:0,75,1593	0/0:22,0:22:66.19:0,66,1411	0/0:13,0:13:36.12:0,36,803	0/0:10,0:10:27.09:0,27,570	0/0:16,0:16:45.14:0,45,936	0/0:10,0:10:30.10:0,30,669	0/0:23,0:22:69.24:0,69,1539	0/0:19,0:19:54.19:0,54,1203	0/0:9,0:9:27.08:0,27,536	0/0:17,0:17:51.18:0,51,1137
chr10	80593442	.	T	TA	2697.19	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.333;DP=478;FS=2.868;HRun=4;HaplotypeScore=46.5445;InbreedingCoeff=0.9779;MQ=77.15;MQ0=0;MQRankSum=-0.014;QD=35.03;ReadPosRankSum=0.576;VQSLOD=3.9718;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:54.18:738,54,0	0/0:6,0:6:18.05:0,18,204	0/0:14,0:14:36.10:0,36,408	0/0:7,0:7:15.04:0,15,163	0/0:38,0:38:99:0,105,1188	1/1:1,18:19:51.17:697,51,0	1/1:0,4:4:12.04:164,12,0	0/0:28,0:28:66.17:0,66,733	0/0:18,0:18:54.15:0,54,612	0/0:24,0:24:72.21:0,72,817	0/0:19,0:19:54.15:0,54,612	0/0:9,0:9:27.06:0,27,295	1/1:0,18:18:51.17:697,51,0	1/1:0,15:15:42.14:574,42,0	0/0:17,0:17:51.15:0,51,579	0/0:15,0:15:45.13:0,45,510	0/0:21,0:21:60.17:0,60,680	0/0:17,0:17:48.12:0,48,535	0/0:18,0:18:48.14:0,48,545	0/0:33,0:33:84.22:0,84,943	0/0:11,0:11:30.07:0,30,329	0/0:19,0:19:57.13:0,57,626	0/0:15,0:15:45.11:0,45,501	0/0:4,0:4:12.03:0,12,136	0/0:17,0:17:51.15:0,51,579	0/0:21,0:21:54.15:0,54,613	0/0:24,0:24:66.13:0,66,716	0/0:6,0:6:18.05:0,18,204
chr10	80593635	.	AG	A	2845.42	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.622;DP=537;FS=4.238;HRun=1;HaplotypeScore=52.8963;InbreedingCoeff=0.9916;MQ=83.48;MQ0=0;MQRankSum=-1.536;QD=37.94;ReadPosRankSum=1.772;VQSLOD=4.0925;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:39.13:545,39,0	0/0:11,0:11:33.11:0,33,516	0/0:19,0:19:50.21:0,50,713	0/0:12,0:12:33.08:0,33,464	0/0:22,0:22:66.21:0,66,1010	1/1:0,15:15:45.15:629,45,0	1/1:0,4:4:12.04:168,12,0	0/0:35,0:35:99:0,105,1527	0/0:17,0:17:51.17:0,51,798	0/0:30,0:30:87.28:0,87,1324	0/0:32,0:32:96.27:0,96,1411	0/0:10,0:10:30.10:0,30,469	1/1:0,20:20:60.20:839,60,0	1/1:0,23:23:59.90:839,60,0	0/0:19,0:19:57.18:0,57,867	0/0:21,0:21:63.21:0,63,985	0/0:21,0:21:60.18:0,60,910	0/0:23,0:23:63.09:0,63,893	0/0:16,0:16:48.15:0,48,728	0/0:24,0:24:72.21:0,72,1080	0/0:20,0:20:60.19:0,60,914	0/0:13,0:13:39.13:0,39,610	0/0:22,0:22:63.18:0,63,940	0/0:8,0:8:24.06:0,24,352	0/0:20,0:20:60.17:0,60,891	0/0:20,0:20:60.20:0,60,939	0/0:39,0:39:99:0,117,1828	0/0:8,0:8:24.08:0,24,375
chr10	80594926	.	C	CT	348.04	PASS	AB=1.000;AC=7;AF=0.135;AN=52;BaseQRankSum=5.126;DP=283;FS=52.705;HRun=0;HaplotypeScore=26.3791;InbreedingCoeff=0.5198;MQ=44.35;MQ0=56;MQRankSum=-3.119;QD=8.49;ReadPosRankSum=-1.489;VQSLOD=1.3923;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:5,0:5:9.03:0,9,119	0/0:21,0:2:6.01:0,6,68	0/1:24,0:3:32.69:45,0,33	0/0:13,0:12:18.06:0,18,251	1/1:1,6:3:9.03:144,9,0	./.	0/0:13,0:5:9.03:0,9,126	0/0:10,0:8:18.06:0,18,251	0/0:10,0:6:18.06:0,18,249	0/0:11,0:11:24.07:0,24,334	0/0:17,0:13:15.05:0,15,209	1/1:0,4:1:3.01:48,3,0	1/1:0,6:5:15.05:239,15,0	0/0:17,0:14:27.09:0,27,377	0/0:8,0:6:18.06:0,18,252	0/0:18,0:18:18.06:0,18,251	0/0:13,0:11:18.06:0,18,251	0/0:6,0:1:3.01:0,3,42	0/0:5,0:5:9.03:0,9,125	0/0:21,0:18:30.10:0,30,413	0/0:4,0:4:12.04:0,12,167	0/0:7,0:5:15.05:0,15,209	0/0:15,1:14:15.03:0,15,209	0/0:7,0:7:15.05:0,15,209	0/0:5,0:2:3.01:0,3,42	0/0:7,1:6:9.03:0,9,125	0/0:1,0:1:3.01:0,3,42
chr10	80595664	.	C	CT	1576.01	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.729;DP=557;FS=8.487;HRun=2;HaplotypeScore=92.0709;InbreedingCoeff=0.9954;MQ=80.55;MQ0=0;MQRankSum=-12.807;QD=17.91;ReadPosRankSum=-0.421;VQSLOD=2.8664;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,3:15:25.36:244,25,0	0/0:7,0:7:18.06:0,18,223	0/0:25,0:25:72.20:0,72,858	0/0:7,0:7:21.04:0,21,243	0/0:37,0:37:99:0,99,1161	1/1:18,8:26:74.49:572,74,0	1/1:11,0:11:26.38:200,26,0	0/0:31,0:31:87.23:0,87,1020	0/0:14,0:14:39.10:0,39,460	0/0:25,0:25:69.20:0,69,835	0/0:28,0:28:84.23:0,84,997	0/0:21,0:21:60.18:0,60,733	1/1:15,7:22:59.18:453,59,0	1/1:11,3:14:38.59:282,39,0	0/0:22,0:22:63.20:0,63,780	0/0:25,0:25:75.19:0,75,901	0/0:23,0:23:66.13:0,66,773	0/0:10,0:10:30.09:0,30,371	0/0:16,0:16:42.11:0,42,496	0/0:26,0:26:69.17:0,69,806	0/0:12,0:12:36.10:0,36,434	0/0:15,0:15:45.14:0,45,557	0/0:26,0:26:72.21:0,72,878	0/0:8,0:8:24.06:0,24,284	0/0:16,0:16:45.14:0,45,558	0/0:30,0:30:81.25:0,81,994	0/0:37,0:37:99:0,111,1331	0/0:8,0:7:24.08:0,24,297
chr10	80595667	.	A	AAGGAAAATTAAATATTTT	13538.13	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.780;DP=548;FS=2.707;HRun=0;HaplotypeScore=257.8838;InbreedingCoeff=0.9967;MQ=81.51;MQ0=0;MQRankSum=-12.680;QD=159.27;ReadPosRankSum=-0.231;VQSLOD=4.5504;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,3:15:37.85:1722,38,0	0/0:7,0:7:21.06:0,21,971	0/0:25,0:25:72.25:0,72,2896	0/0:8,0:8:21.07:0,21,717	0/0:33,0:33:99:0,99,4103	1/1:16,9:25:72.25:4877,72,0	1/1:11,0:11:28.31:1264,28,0	0/0:30,0:30:84.27:0,84,3396	0/0:12,0:12:36.11:0,36,1734	0/0:24,0:24:69.24:0,69,3190	0/0:28,0:28:84.28:0,84,3679	0/0:21,0:21:63.20:0,63,2986	1/1:14,7:21:46.20:3493,46,0	1/1:10,3:13:34:2182,34,0	0/0:22,0:22:65.81:0,66,3127	0/0:25,0:25:72.25:0,72,3425	0/0:22,0:22:63.19:0,63,3009	0/0:10,0:10:30.10:0,30,1577	0/0:14,0:14:42.13:0,42,1631	0/0:25,0:25:75.22:0,75,3028	0/0:11,0:11:33.11:0,33,1734	0/0:17,0:17:51.14:0,51,2345	0/0:27,0:27:75.23:0,75,3519	0/0:9,0:9:24.08:0,24,1087	0/0:17,0:17:51.15:0,51,2237	0/0:30,0:30:90.28:0,90,3950	0/0:38,0:38:99:0,111,5285	0/0:8,0:7:24.08:0,24,1219
chr10	80597262	.	CAGAT	C	2749.79	PASS	AB=0.944;AC=31;AF=0.596;AN=52;BaseQRankSum=8.704;DP=560;FS=4.001;HRun=0;HaplotypeScore=108.3831;InbreedingCoeff=0.6867;MQ=64.64;MQ0=5;MQRankSum=-0.270;QD=8.54;ReadPosRankSum=-0.625;VQSLOD=2.5473;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:2.96:0,3,22	1/1:6,6:12:15.05:229,15,0	./.	./.	1/1:19,15:34:18.06:266,18,0	1/1:9,0:22:9.01:85,9,0	0/0:10,0:10:0:0,0,0	0/0:25,0:25:0:0,0,0	1/1:11,11:22:24.08:366,24,0	0/0:24,0:23:39.13:0,39,873	0/0:15,0:15:27.09:0,27,599	1/1:12,9:21:21.07:321,21,0	1/1:24,4:28:1.45:127,1,0	1/1:13,5:18:8.91:64,9,0	1/1:10,10:20:15.05:229,15,0	1/1:10,7:17:18.06:275,18,0	1/1:15,6:21:2.65:45,3,0	0/1:16,1:17:34.30:34,0,77	0/0:16,0:15:9.03:0,9,192	0/0:22,0:22:27.08:0,27,537	0/0:24,0:24:27.09:0,27,602	0/0:22,0:22:42.09:0,42,818	1/1:12,0:23:5.54:44,6,0	1/1:4,9:13:12.04:183,12,0	1/1:10,10:20:15.05:229,15,0	1/1:14,10:24:30.04:388,30,0	0/0:35,0:35:18.05:0,18,336	1/1:0,9:9:3.01:46,3,0
chr10	80597837	.	A	AAT	460.60	PASS	AC=8;AF=0.160;AN=50;BaseQRankSum=-1.028;DP=180;FS=2.499;HRun=0;HaplotypeScore=26.1111;InbreedingCoeff=0.5699;MQ=78.37;MQ0=0;MQRankSum=-0.793;QD=20.94;ReadPosRankSum=1.831;VQSLOD=3.3344;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:4:3:27,3,0	0/0:4,0:4:12.03:0,12,141	0/0:6,0:6:10.70:0,11,129	0/0:11,0:7:4.72:0,5,32	0/0:9,0:9:21.05:0,21,256	1/1:1,12:13:30.10:506,30,0	./.	0/0:34,0:34:84.27:0,84,1075	./.	0/0:8,0:8:24.08:0,24,309	0/0:2,0:2:6.02:0,6,77	0/0:2,0:2:6.02:0,6,77	1/1:1,0:2:3:27,3,0	1/1:0,0:3:3:27,3,0	0/0:5,0:5:15.05:0,15,193	0/0:2,0:2:6.02:0,6,77	0/0:7,0:7:21.07:0,21,269	0/0:11,0:11:33.11:0,33,423	0/0:14,0:14:33.11:0,33,425	0/0:2,0:2:6.02:0,6,77	0/0:3,0:3:9.03:0,9,116	./.	0/0:3,0:3:6.02:0,6,77	0/0:1,0:1:3.01:0,3,39	0/0:6,0:6:18.06:0,18,231	0/0:1,0:1:3.01:0,3,39	0/0:9,0:9:27.09:0,27,347	0/0:18,0:18:42.12:0,42,521
chr10	80598620	.	CATATATATATAT	C	444.64	PASS	AC=2;AF=0.083;AN=24;BaseQRankSum=2.024;DP=112;FS=11.929;HRun=0;HaplotypeScore=43.4238;InbreedingCoeff=0.3852;MQ=87.23;MQ0=3;MQRankSum=-2.335;QD=63.52;ReadPosRankSum=2.647;VQSLOD=1.7181;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:11,0:5:0.47:0,0,1	./.	1/1:2,5:7:15.05:526,15,0	./.	0/0:19,0:19:27.09:0,27,1021	./.	0/0:5,0:5:2.96:0,3,19	./.	./.	./.	./.	0/0:2,0:2:6.02:0,6,347	0/0:3,0:3:3.01:0,3,144	0/0:3,0:6:12.04:0,12,548	./.	0/0:7,0:7:3.01:0,3,123	./.	./.	./.	./.	0/0:4,0:4:3.01:0,3,177	0/0:2,0:2:3:0,3,26	./.	0/0:4,0:5:9.03:0,9,298	0/0:6,0:6:12.04:0,12,706
chr10	80598781	.	AT	A	36.81	PASS	AB=0.545;AC=3;AF=0.060;AN=50;BaseQRankSum=1.830;DP=242;FS=4.472;HRun=9;HaplotypeScore=44.3660;InbreedingCoeff=0.2845;MQ=63.65;MQ0=1;MQRankSum=-2.387;QD=4.60;ReadPosRankSum=-0.841;VQSLOD=-0.2311;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:6:18.05:0,18,208	0/0:6,0:4:8.88:0,9,98	0/0:5,0:4:9.01:0,9,94	0/0:11,0:11:30.04:0,30,321	0/0:8,0:8:1.22:0,1,3	./.	0/0:28,0:28:75.22:0,75,860	0/0:6,0:6:18.04:0,18,196	0/0:6,0:6:15.04:0,15,166	0/0:14,0:14:39.09:0,39,433	0/1:1,5:6:16.67:110,0,17	1/1:2,0:2:1.55:4,2,0	./.	0/0:12,0:12:33.10:0,33,380	0/0:9,0:9:27.08:0,27,309	0/0:9,0:9:18.90:0,19,195	0/0:10,0:10:1.74:0,2,188	0/0:19,0:19:54.11:0,54,605	0/0:16,0:16:39.11:0,39,442	0/0:6,0:6:15.04:0,15,172	0/0:2,0:2:6.02:0,6,69	0/0:9,0:9:27.08:0,27,311	0/0:6,0:6:18.05:0,18,206	0/0:7,0:7:21.06:0,21,235	0/0:5,0:5:9.03:0,9,102	0/0:18,0:18:51.13:0,51,568	0/0:11,0:12:28.73:0,29,295
chr10	80599023	.	C	CT	2511.14	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.045;DP=597;FS=5.543;HRun=1;HaplotypeScore=68.0782;InbreedingCoeff=0.9939;MQ=84.31;MQ0=0;MQRankSum=-5.792;QD=39.86;ReadPosRankSum=0.269;VQSLOD=4.1885;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,10:12:32.71:396,33,0	0/0:11,0:11:33.09:0,33,414	0/0:28,0:28:44.25:0,44,817	0/0:32,0:32:69.19:0,69,891	0/0:21,0:21:63.20:0,63,818	0/0:25,0:24:69.22:0,69,893	0/0:15,0:15:39.13:0,39,505	0/0:38,0:38:99:0,111,1375	0/0:16,0:16:48.15:0,48,609	0/0:22,0:22:63.19:0,63,795	0/0:32,0:32:96.31:0,96,1236	0/0:26,0:26:78.24:0,78,997	1/1:2,26:28:84.28:1238,84,0	1/1:2,21:23:69.23:1020,69,0	0/0:29,0:29:87.28:0,87,1128	0/0:16,0:16:48.16:0,48,622	0/0:14,0:14:39.12:0,39,492	0/0:5,0:5:15.05:0,15,194	0/0:11,0:11:33.11:0,33,428	0/0:20,0:20:60.17:0,60,750	0/0:18,0:18:51.17:0,51,661	0/0:12,0:12:36.09:0,36,439	0/0:29,0:29:78.25:0,78,1010	0/0:11,0:11:33.08:0,33,410	0/0:23,0:23:69.22:0,69,895	0/0:18,0:18:48.15:0,48,611	0/0:40,0:40:99:0,120,1472	0/0:21,0:21:63.20:0,63,817
chr10	80599055	.	TA	T	1814.85	PASS	AB=0.938;AC=11;AF=0.196;AN=56;BaseQRankSum=10.955;DP=563;FS=12.012;HRun=9;HaplotypeScore=60.3515;InbreedingCoeff=0.8667;MQ=77.39;MQ0=0;MQRankSum=-4.106;QD=17.12;ReadPosRankSum=1.142;VQSLOD=2.6317;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,5:8:8.99:82,9,0	0/0:11,0:11:33.10:0,33,381	0/0:19,0:19:39.06:0,39,409	0/1:13,1:15:29.95:30,0,81	0/0:28,0:28:75.16:0,75,841	1/1:0,22:22:63.03:576,63,0	1/1:3,14:17:33.01:302,33,0	0/0:30,0:30:72.20:0,72,822	0/0:19,0:19:51.15:0,51,589	0/0:26,0:26:78.21:0,78,885	0/0:30,0:30:81.23:0,81,927	0/0:24,1:25:41.73:0,42,724	1/1:5,15:20:53.97:479,54,0	1/1:3,21:24:57.02:521,57,0	0/0:23,0:23:57.16:0,57,648	0/0:15,0:15:39.08:0,39,423	0/0:15,0:15:39.10:0,39,440	0/0:4,0:4:11.94:0,12,108	0/0:14,0:14:39.12:0,39,450	0/0:28,0:28:49.10:0,49,743	0/0:18,0:18:45.13:0,45,519	0/0:12,0:12:36.10:0,36,407	0/0:28,0:28:66.18:0,66,752	0/0:12,0:12:30.09:0,30,346	0/0:25,1:26:41.73:0,42,725	0/0:19,0:19:48.11:0,48,541	0/0:33,0:33:96.27:0,96,1094	0/0:22,0:22:48.14:0,48,554
chr10	80599866	.	TA	T	1883.15	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.796;DP=476;FS=2.819;HRun=9;HaplotypeScore=48.2121;InbreedingCoeff=0.9907;MQ=76.06;MQ0=0;MQRankSum=0.455;QD=21.16;ReadPosRankSum=2.888;VQSLOD=4.2841;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:47.72:439,48,0	0/0:8,0:8:24.07:0,24,277	0/0:20,0:20:30.39:0,30,334	0/0:9,0:9:13.94:0,14,166	0/0:26,0:26:72.21:0,72,831	1/1:0,23:23:63.03:577,63,0	1/1:1,17:18:45.02:412,45,0	0/0:27,0:27:65.62:0,66,740	0/0:9,0:9:18.05:0,18,208	0/0:21,0:22:57:0,57,638	0/0:28,0:28:69.20:0,69,796	0/0:11,0:11:33.10:0,33,381	1/1:2,13:15:36.02:329,36,0	1/1:1,13:14:32.99:302,33,0	0/0:19,0:19:54.12:0,54,600	0/0:14,0:14:39.12:0,39,449	0/0:15,0:15:36.11:0,36,415	0/0:7,0:7:21.06:0,21,242	0/0:22,0:22:60.16:0,60,676	0/0:27,0:27:66.20:0,66,762	0/0:14,0:14:42.12:0,42,485	0/0:17,0:17:45.12:0,45,509	0/0:20,0:20:51.15:0,51,588	0/0:13,0:13:33.10:0,33,381	0/0:14,0:14:39.12:0,39,450	0/0:16,0:16:45.13:0,45,519	0/0:22,0:22:60.18:0,60,692	0/0:7,0:7:21.06:0,21,242
chr10	80600729	.	AT	A	1838.75	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.363;DP=542;FS=16.236;HRun=9;HaplotypeScore=52.4174;InbreedingCoeff=0.9843;MQ=74.87;MQ0=0;MQRankSum=-3.465;QD=20.43;ReadPosRankSum=0.547;VQSLOD=2.5498;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,22:27:44.93:530,45,0	0/0:5,0:5:12.04:0,12,139	0/0:17,0:17:24.87:0,25,373	0/0:18,0:17:40.33:0,40,437	0/0:38,0:39:99:0,108,1226	1/1:2,23:25:69.04:631,69,0	1/1:3,6:9:15:137,15,0	0/0:35,0:34:78.21:0,78,883	0/0:16,0:16:45.13:0,45,519	0/0:23,0:23:66.20:0,66,760	0/0:26,0:26:66.20:0,66,762	0/0:14,0:14:39.12:0,39,450	1/1:0,15:15:42.02:384,42,0	1/1:0,14:14:36.02:329,36,0	0/0:13,0:13:33.09:0,33,372	0/0:19,0:19:54.16:0,54,623	0/0:17,0:18:47.97:0,48,534	0/0:12,0:12:36.07:0,36,401	0/0:14,0:14:33.10:0,33,380	0/0:22,0:22:60.17:0,60,684	0/0:7,0:7:15.03:0,15,164	0/0:20,0:20:51.15:0,51,588	0/0:23,0:23:66.20:0,66,762	0/0:18,0:18:48.14:0,48,554	0/0:27,0:27:72.21:0,72,824	0/0:20,1:22:26.52:0,27,541	0/0:33,1:35:71.64:0,72,1050	0/0:9,0:9:27.05:0,27,298
chr10	80600870	.	GTCTATCTATCTA	G	325.81	PASS	AC=4;AF=0.080;AN=50;BaseQRankSum=0.164;DP=542;FS=1.518;HRun=0;HaplotypeScore=192.4317;InbreedingCoeff=0.8917;MQ=62.00;MQ0=7;MQRankSum=-1.826;QD=11.23;ReadPosRankSum=-0.660;VQSLOD=2.2512;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,10:16:6.02:175,6,0	0/0:8,0:7:15.04:0,15,439	0/0:15,0:14:21.05:0,21,444	0/0:9,0:7:12.03:0,12,217	0/0:33,0:31:60.21:0,60,1864	./.	1/1:11,0:11:15.05:257,15,0	0/0:48,0:48:99:0,114,2399	0/0:18,0:18:39.13:0,39,1353	0/0:25,0:25:51.16:0,51,1570	0/0:13,0:12:33.10:0,33,1064	0/0:18,0:16:48.15:0,48,1267	./.	./.	0/0:19,0:18:36.11:0,36,1266	0/0:23,0:21:47.69:0,48,1733	0/0:25,0:25:41.73:0,42,1548	0/0:17,0:15:23.42:0,23,613	0/0:19,0:19:36.11:0,36,1198	0/0:28,0:28:72.25:0,72,2256	0/0:16,0:16:39.13:0,39,1174	0/0:15,0:15:42.14:0,42,1413	0/0:18,0:18:42.12:0,42,1301	0/0:17,0:17:41.74:0,42,1690	0/0:20,0:20:45.13:0,45,1158	0/0:24,0:24:57.18:0,57,1703	0/0:32,0:31:78.23:0,78,2436	0/0:7,0:5:12.04:0,12,362
chr10	80603089	.	GA	G	2569.21	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.061;DP=628;FS=7.295;HRun=9;HaplotypeScore=62.5864;InbreedingCoeff=0.9992;MQ=78.47;MQ0=1;MQRankSum=-1.265;QD=21.77;ReadPosRankSum=2.557;VQSLOD=4.5802;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:72.03:658,72,0	0/0:10,0:10:27.08:0,27,311	0/0:17,0:16:35.50:0,36,329	0/0:16,0:14:30.04:0,30,313	0/0:39,0:39:99:0,111,1281	1/1:2,25:27:69.04:632,69,0	1/1:2,23:25:60.03:549,60,0	0/0:27,0:27:66.19:0,66,754	0/0:17,0:17:51.11:0,51,559	0/0:29,1:30:56.77:0,57,893	0/0:28,1:29:56.75:0,57,894	0/0:16,0:16:42.12:0,42,485	1/1:0,16:16:42.02:384,42,0	1/1:2,20:22:57.03:522,57,0	0/0:23,0:23:69.07:0,69,776	0/0:18,0:18:48.13:0,48,545	0/0:29,0:29:69.21:0,69,796	0/0:22,0:22:60.18:0,60,692	0/0:14,0:14:30.08:0,30,337	0/0:36,0:36:96.27:0,96,1090	0/0:17,0:17:48.14:0,48,554	0/0:25,0:25:69.21:0,69,796	0/0:22,0:22:63.19:0,63,727	0/0:11,0:11:27.08:0,27,312	0/0:25,0:25:60.18:0,60,692	0/0:27,0:27:72.21:0,72,824	0/0:23,0:23:63.19:0,63,727	0/0:17,0:17:51.08:0,51,534
chr10	80606617	.	TAA	T	353.46	PASS	AB=0.765;AC=5;AF=0.089;AN=56;BaseQRankSum=5.176;DP=301;FS=6.423;HRun=14;HaplotypeScore=39.7659;InbreedingCoeff=0.6661;MQ=49.89;MQ0=6;MQRankSum=-0.907;QD=10.71;ReadPosRankSum=1.478;VQSLOD=1.3082;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:9,4:11:4.50:96,0,4	0/0:5,0:6:18.02:0,18,230	0/0:5,0:2:6:0,6,54	0/0:3,0:2:3.68:0,4,15	0/0:16,0:22:43.72:0,44,399	0/0:10,0:12:24.02:0,24,287	0/0:7,0:7:17.40:0,17,147	0/0:15,0:15:36.03:0,36,433	0/0:12,0:12:30.04:0,30,371	0/0:12,0:12:23.92:0,24,262	0/0:13,0:15:37.96:0,38,395	0/0:12,0:12:27:0,27,331	1/1:2,8:10:23.99:221,24,0	1/1:4,6:10:15.68:163,16,0	0/0:12,0:11:12.87:0,13,148	0/0:8,0:9:23.98:0,24,262	0/0:13,0:14:23.22:0,23,254	0/0:12,0:12:32.90:0,33,324	0/0:9,0:10:22.45:0,22,169	0/0:6,0:6:11.96:0,12,111	0/0:6,0:5:5.95:0,6,44	0/0:5,0:5:5.98:0,6,62	0/0:10,0:11:29.39:0,29,347	0/0:6,0:7:17.31:0,17,153	0/0:13,0:15:23.95:0,24,247	0/0:14,0:13:26.94:0,27,311	0/0:9,0:9:14.95:0,15,166	0/0:9,0:11:30.41:0,30,324
chr10	80606677	.	A	ATT	1163.53	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-0.117;DP=358;FS=0.770;HRun=11;HaplotypeScore=50.5574;InbreedingCoeff=0.8554;MQ=75.87;MQ0=0;MQRankSum=-2.060;QD=24.76;ReadPosRankSum=0.904;VQSLOD=3.0667;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:42.14:607,42,0	0/0:6,0:6:11.98:0,12,116	0/0:10,0:10:17.99:0,18,173	0/0:13,0:13:5.84:0,6,101	0/0:17,0:19:38.43:0,38,343	0/0:8,0:8:17.99:0,18,169	0/0:5,0:6:8.95:0,9,136	0/0:25,0:26:62.79:0,63,589	0/0:21,0:22:62.78:0,63,582	0/0:9,0:9:14.99:0,15,145	0/0:16,0:17:44.76:0,45,419	0/0:10,0:10:17.96:0,18,174	1/1:6,12:18:32.92:413,33,0	1/1:4,8:12:21.06:285,21,0	0/0:17,0:17:48.03:0,48,458	0/0:9,0:9:17.97:0,18,175	0/0:18,0:19:32.97:0,33,369	0/0:14,0:15:23.98:0,24,276	0/0:12,0:12:30.03:0,30,291	0/0:13,0:13:39.06:0,39,378	0/0:4,0:4:12.02:0,12,116	0/0:5,0:5:11.99:0,12,116	0/0:12,0:12:26.94:0,27,250	0/0:9,0:9:13.46:0,13,168	0/0:14,0:14:35.72:0,36,324	0/0:17,0:18:44.74:0,45,413	0/0:9,0:9:17.96:0,18,163	0/0:8,0:8:5.93:0,6,58
chr10	80607618	.	A	AT	452.01	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.572;DP=440;FS=0.984;HRun=6;HaplotypeScore=39.0794;InbreedingCoeff=0.9072;MQ=77.97;MQ0=0;MQRankSum=-1.401;QD=20.55;ReadPosRankSum=-0.629;VQSLOD=2.4765;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:24.04:0,24,238	0/0:2,0:2:6.01:0,6,61	0/0:8,0:8:18.04:0,18,183	0/0:11,0:11:26.24:0,26,240	0/0:20,0:20:54.12:0,54,551	1/1:1,15:16:36.12:453,36,0	1/1:3,3:6:9.03:113,9,0	0/0:42,0:42:99:0,111,1123	0/0:11,0:11:27.05:0,27,270	0/0:29,0:29:79.99:0,80,800	0/0:20,0:20:60.14:0,60,612	0/0:13,0:13:36.08:0,36,367	0/0:16,0:16:42.09:0,42,428	0/0:16,0:16:42.09:0,42,428	0/0:7,0:7:21.05:0,21,214	0/0:12,0:12:30.06:0,30,306	0/0:21,0:21:54.08:0,54,541	0/0:8,0:8:21.05:0,21,214	0/0:14,0:14:39.08:0,39,393	0/0:21,0:21:57.13:0,57,581	0/0:19,0:19:54.12:0,54,551	0/0:14,0:14:42.08:0,42,421	0/0:20,0:20:54.12:0,54,551	0/0:9,0:9:27.06:0,27,275	0/0:17,0:17:48.11:0,48,490	0/0:16,0:16:48.11:0,48,490	0/0:31,0:31:81.17:0,81,826	0/0:12,0:12:33.07:0,33,337
chr10	80607998	.	TA	T	1502.52	PASS	AB=0.857;AC=11;AF=0.196;AN=56;BaseQRankSum=10.262;DP=514;FS=2.874;HRun=10;HaplotypeScore=49.0186;InbreedingCoeff=0.8507;MQ=69.12;MQ0=0;MQRankSum=0.632;QD=15.03;ReadPosRankSum=2.193;VQSLOD=3.7692;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,15:19:8.51:339,9,0	0/0:5,0:5:15.04:0,15,166	0/1:10,2:12:36.69:37,0,101	0/0:7,0:7:9.02:0,9,92	0/0:32,0:32:87.23:0,87,954	1/1:2,18:20:44.99:391,45,0	1/1:4,9:13:23.99:208,24,0	0/0:25,0:25:60.16:0,60,657	0/0:18,0:18:48.13:0,48,526	0/0:31,0:31:87.22:0,87,949	0/0:28,0:28:84.23:0,84,929	0/0:10,0:10:27.07:0,27,299	1/1:1,17:18:38.99:339,39,0	1/1:2,16:18:41.99:365,42,0	0/0:18,0:18:54.11:0,54,584	0/0:22,0:22:60.11:0,60,643	0/0:6,0:6:15.04:0,15,166	0/0:18,0:18:48.10:0,48,518	0/0:23,1:24:28.07:0,28,524	0/0:35,0:35:90.21:0,90,973	0/0:8,0:8:18.05:0,18,199	0/0:22,0:22:60.15:0,60,656	0/0:9,0:9:24.06:0,24,265	0/0:10,0:10:27.07:0,27,299	0/0:20,0:20:48.13:0,48,530	0/0:18,1:20:27.91:0,28,511	0/0:27,1:28:49.06:0,49,754	0/0:18,0:18:54.15:0,54,597
chr10	80608214	.	T	TTAGA	2548.56	PASS	AB=0.684;AC=16;AF=0.320;AN=50;BaseQRankSum=-6.501;DP=540;FS=28.142;HRun=0;HaplotypeScore=105.9760;InbreedingCoeff=0.6670;MQ=80.25;MQ0=4;MQRankSum=1.350;QD=14.90;ReadPosRankSum=0.286;VQSLOD=1.2696;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:31:14.94:0,15,129	0/0:11,0:11:12.04:0,12,181	./.	./.	1/1:16,11:29:21.07:484,21,0	0/0:15,0:15:12.04:0,12,181	0/0:14,0:14:3.01:0,3,42	./.	0/0:17,0:17:21.07:0,21,313	0/0:28,0:28:33.11:0,33,482	0/0:21,0:21:45.15:0,45,668	0/0:2,0:10:18.93:0,19,192	0/0:19,0:19:24.08:0,24,355	0/0:18,0:18:27.08:0,27,389	1/1:9,7:17:12.04:265,12,0	0/0:20,0:20:27.09:0,27,403	0/0:11,0:16:6.92:0,7,80	0/0:12,0:12:14.64:0,15,185	1/1:7,6:14:21.07:455,21,0	0/1:13,11:24:24.24:394,0,24	0/1:8,6:15:99:124,0,121	0/0:11,0:14:3:0,3,28	0/0:16,0:19:15.50:0,15,169	1/1:7,0:7:0.26:1,0,0	0/0:23,0:23:21.04:0,21,280	1/1:13,9:22:30.06:587,30,0	1/1:26,2:28:11.89:139,12,0	1/1:9,4:14:12.04:276,12,0
chr10	80609268	.	CA	C	434.44	PASS	AB=0.813;AC=10;AF=0.179;AN=56;BaseQRankSum=4.981;DP=525;FS=8.739;HRun=15;HaplotypeScore=67.6077;InbreedingCoeff=0.5992;MQ=65.08;MQ0=1;MQRankSum=-0.053;QD=4.26;ReadPosRankSum=5.518;VQSLOD=0.6625;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,14:23:21.22:221,21,0	0/0:9,0:10:17.26:0,17,161	0/0:6,0:3:2.96:0,3,19	0/0:9,0:6:4.10:0,4,29	0/0:30,2:33:43.14:0,43,441	1/1:8,11:21:7.10:158,7,0	1/1:7,0:8:4.82:25,5,0	0/0:33,0:33:51.94:0,52,395	0/0:20,0:20:33.21:0,33,259	0/0:17,0:17:23.98:0,24,205	0/0:17,1:18:14.80:0,15,218	0/0:14,0:14:14.93:0,15,115	1/1:22,3:25:11.67:74,12,0	0/1:12,5:18:1.58:97,0,2	0/0:14,0:14:28.48:0,28,215	0/0:17,0:17:29.57:0,30,223	0/0:21,0:21:47.76:0,48,371	0/1:6,1:7:8.48:8,0,75	0/0:12,0:12:16.46:0,16,112	0/0:34,0:34:58.49:0,58,486	0/0:6,0:6:14.98:0,15,126	0/0:27,1:29:14.75:0,15,236	0/0:19,0:23:26.12:0,26,278	0/0:13,1:15:3.99:0,4,124	0/0:14,1:16:8.68:0,9,209	0/0:17,1:20:4.58:0,5,146	0/0:29,0:44:18.32:0,18,346	0/0:9,1:12:4.57:0,5,153
chr10	80609728	.	AAC	A	518.71	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.830;DP=378;FS=5.146;HRun=0;HaplotypeScore=46.9721;InbreedingCoeff=0.9247;MQ=63.75;MQ0=0;MQRankSum=-1.362;QD=20.75;ReadPosRankSum=0.384;VQSLOD=2.6918;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.16:0,54,898	0/0:8,0:8:24.04:0,24,359	0/0:9,0:7:18.03:0,18,254	0/0:5,0:5:9.03:0,9,141	0/0:29,0:29:72.23:0,72,1220	1/1:3,11:14:24.08:320,24,0	1/1:1,10:11:24.08:319,24,0	0/0:43,0:43:99:0,117,1993	0/0:7,0:7:18.06:0,18,311	0/0:23,0:23:54.17:0,54,902	0/0:25,0:25:69.18:0,69,1104	0/0:6,0:6:18.06:0,18,307	0/0:13,0:13:36.12:0,36,623	0/0:8,0:8:21.07:0,21,364	0/0:9,0:9:24.08:0,24,416	0/0:5,0:5:15.05:0,15,260	0/0:15,0:15:42.10:0,42,695	0/0:13,0:13:27.06:0,27,411	0/0:13,0:13:33.09:0,33,516	0/0:17,0:17:45.15:0,45,754	0/0:5,0:5:15.05:0,15,260	0/0:7,0:7:18.06:0,18,312	0/0:10,0:10:27.09:0,27,467	0/0:5,0:5:15.05:0,15,260	0/0:15,0:15:39.12:0,39,643	0/0:11,0:11:24.08:0,24,416	0/0:21,0:20:57.17:0,57,957	0/0:10,0:10:27.09:0,27,467
chr10	80611001	.	G	GGTT	10008.77	PASS	AB=0.661;AC=28;AF=0.500;AN=56;BaseQRankSum=-12.563;DP=739;FS=11.284;HRun=0;HaplotypeScore=108.2571;InbreedingCoeff=0.6537;MQ=61.80;MQ0=5;MQRankSum=1.624;QD=23.38;ReadPosRankSum=0.431;VQSLOD=4.0560;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:21:17.86:0,18,126	1/1:2,3:5:6.02:117,6,0	0/0:30,0:22:12.01:0,12,140	0/0:35,0:23:8.53:0,9,91	1/1:24,1:35:26.98:325,27,0	0/0:9,0:22:32.43:0,32,220	0/0:5,0:9:2.98:0,3,21	1/1:23,6:30:13.26:170,13,0	0/0:26,0:27:54.11:0,54,673	1/1:17,18:35:51.16:942,51,0	1/1:17,15:32:45.11:836,45,0	0/0:21,0:21:36.10:0,36,455	0/0:5,0:21:47.61:0,48,334	0/0:6,0:20:38.68:0,39,271	0/1:11,18:28:26.34:851,0,26	1/1:10,15:27:1.90:717,2,0	1/1:10,14:24:30.10:583,30,0	1/1:7,11:18:21.07:408,21,0	1/1:12,11:22:33.07:599,33,0	0/1:20,15:36:29.73:621,0,30	1/1:10,6:16:18.06:350,18,0	0/0:35,0:35:57.12:0,57,702	0/0:34,0:35:40.59:0,41,428	0/0:35,0:35:75.22:0,75,963	0/1:12,13:26:1.13:659,0,1	1/1:7,17:25:16.93:976,17,0	1/1:15,27:43:11.23:1261,11,0	0/1:13,11:24:38.43:595,0,38
chr10	80611440	.	GCATGCACACA	G	1380.22	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=2.724;DP=508;FS=7.095;HRun=0;HaplotypeScore=158.0769;InbreedingCoeff=0.8416;MQ=63.36;MQ0=6;MQRankSum=-1.762;QD=24.65;ReadPosRankSum=-0.207;VQSLOD=2.5110;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:4:12.04:0,12,214	0/0:14,0:7:0.05:0,0,46	0/0:18,0:8:8.82:0,9,109	0/0:19,0:19:42.14:0,42,1043	1/1:11,1:16:33.11:609,33,0	1/1:1,0:11:3.01:80,3,0	0/0:22,0:22:66.22:0,66,1339	0/0:12,0:12:30.09:0,30,831	0/0:23,0:23:60.12:0,60,1356	0/0:13,0:13:21.07:0,21,568	0/0:17,0:17:48.16:0,48,1438	1/1:0,12:14:12.04:360,12,0	1/1:1,13:15:14.64:475,15,0	0/0:12,0:12:33.11:0,33,873	0/0:18,0:18:42.13:0,42,1166	0/0:25,0:26:56.93:0,57,1397	0/0:16,0:16:39:0,39,749	0/0:19,0:19:42.14:0,42,816	0/0:19,0:19:57.19:0,57,895	0/0:33,0:31:78.27:0,78,1868	0/0:20,0:20:45.15:0,45,1395	0/0:25,0:25:60.20:0,60,1815	0/0:20,0:20:51.17:0,51,2289	0/0:22,0:22:54.18:0,54,1208	0/0:17,0:17:51.16:0,51,1178	0/0:18,0:18:54.19:0,54,1473	0/0:17,0:15:45.15:0,45,1193
chr10	80611444	.	GCA	G	3568.05	PASS	AB=0.734;AC=36;AF=0.750;AN=48;BaseQRankSum=6.146;DP=518;FS=0.000;HRun=0;HaplotypeScore=90.9773;InbreedingCoeff=0.2310;MQ=60.60;MQ0=10;MQRankSum=-0.435;QD=8.90;ReadPosRankSum=1.913;VQSLOD=3.2967;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:8,11:20:20.89:214,21,0	1/1:16,0:15:8.58:44,9,0	1/1:11,0:10:2.84:14,3,0	1/1:25,3:27:3.18:106,3,0	0/0:9,0:10:15.05:0,15,217	1/1:11,8:21:32.32:294,32,0	1/1:4,8:14:17.71:161,18,0	0/0:18,0:18:24.06:0,24,335	1/1:14,0:14:5.81:37,6,0	1/1:14,0:15:14.18:76,14,0	1/1:4,7:13:26.74:261,27,0	1/1:3,11:15:29.91:313,30,0	1/1:15,12:27:26.88:328,27,0	0/1:9,3:17:21.32:121,0,21	1/1:11,0:15:8.52:42,9,0	1/1:15,2:19:14.54:108,15,0	1/1:25,9:32:30.80:338,31,0	0/1:17,2:21:53.61:54,0,223	0/0:22,4:26:7.30:0,7,341	0/1:16,4:19:84.94:85,0,495	0/1:12,9:24:61.52:168,0,62	0/1:10,8:18:24.46:159,0,24	1/1:5,12:19:35.76:360,36,0	0/1:9,9:17:8.43:286,0,8
chr10	80614354	.	G	GA	454.09	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=5.626;DP=442;FS=4.691;HRun=9;HaplotypeScore=51.2771;InbreedingCoeff=0.8240;MQ=42.37;MQ0=18;MQRankSum=-5.546;QD=9.46;ReadPosRankSum=-1.512;VQSLOD=1.4833;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,11:17:13.05:351,13,0	0/0:11,0:11:11.97:0,12,104	0/1:6,0:1:0:0,0,0	0/1:12,0:2:0:0,0,0	0/0:24,0:21:32.98:0,33,286	0/0:10,0:9:11.78:0,12,103	0/0:11,0:10:17.95:0,18,148	0/0:20,0:7:11.98:0,12,104	0/0:21,0:21:41.96:0,42,364	0/0:30,0:26:50.90:0,51,435	0/0:25,0:24:53.96:0,54,466	0/0:13,0:12:29.98:0,30,260	1/1:2,3:5:9.02:99,9,0	1/1:2,6:6:12.03:131,12,0	0/0:9,0:8:20.95:0,21,175	0/0:13,0:13:26.99:0,27,234	0/0:17,0:17:41.97:0,42,364	0/0:10,0:10:23.99:0,24,208	0/0:9,0:4:12:0,12,104	0/0:24,0:23:44.95:0,45,390	0/0:14,0:13:14.98:0,15,130	0/0:19,0:19:23.97:0,24,208	0/0:9,0:9:17.97:0,18,155	0/0:23,0:23:41.91:0,42,364	0/0:22,0:22:50.91:0,51,433	0/0:24,0:20:44.85:0,45,378	0/0:21,0:19:23.92:0,24,207	0/0:12,0:13:24.91:0,25,182
chr10	80614378	.	A	AAG	444.20	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=6.375;DP=467;FS=10.505;HRun=0;HaplotypeScore=60.1409;InbreedingCoeff=0.7306;MQ=47.72;MQ0=18;MQRankSum=-2.648;QD=10.58;ReadPosRankSum=1.298;VQSLOD=2.1969;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:1.94:2,0,53	0/0:7,0:7:18.03:0,18,229	0/0:14,0:2:5.96:0,6,44	0/0:17,0:9:10.14:0,10,125	0/0:23,0:21:54.02:0,54,662	1/1:3,8:9:18.06:299,18,0	1/1:1,7:8:15.05:249,15,0	0/0:22,0:18:48.09:0,48,588	0/0:20,0:20:51.15:0,51,679	0/0:30,0:27:81.12:0,81,941	0/0:27,0:26:72.12:0,72,923	0/0:17,0:15:32.98:0,33,400	1/1:5,0:5:4.65:23,5,0	0/0:3,0:2:2.97:0,3,20	0/0:12,0:11:30.06:0,30,396	0/0:13,0:13:30.03:0,30,376	0/0:21,0:21:57.18:0,57,780	0/0:13,0:13:34.83:0,35,389	0/0:16,0:11:32.92:0,33,350	0/0:24,0:23:57.16:0,57,762	0/0:5,0:4:9.03:0,9,126	0/0:17,0:17:38.76:0,39,484	0/0:15,0:15:41.68:0,42,516	0/0:19,0:19:57.17:0,57,764	0/0:21,0:20:53.75:0,54,654	0/0:29,0:25:72.09:0,72,868	0/0:27,0:25:71.25:0,71,822	0/0:12,0:11:30.08:0,30,399
chr10	80614381	.	G	GAA	495.25	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=7.484;DP=467;FS=7.360;HRun=11;HaplotypeScore=62.5267;InbreedingCoeff=0.9268;MQ=48.13;MQ0=16;MQRankSum=-3.541;QD=11.26;ReadPosRankSum=0.482;VQSLOD=1.1654;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,10:19:17.84:204,18,0	0/0:6,0:6:18.04:0,18,191	0/0:14,0:2:6:0,6,55	0/0:18,0:9:17.69:0,18,170	0/0:24,0:22:43.46:0,43,414	1/1:9,1:9:18.04:198,18,0	1/1:9,0:8:15.04:160,15,0	0/0:24,0:20:47.44:0,47,479	0/0:19,0:19:32.97:0,33,329	0/0:27,0:25:62.69:0,63,639	0/0:28,0:28:59.90:0,60,651	0/0:18,0:16:26.87:0,27,261	1/1:4,1:5:7.89:84,8,0	./.	0/0:12,0:11:26.99:0,27,271	0/0:14,0:14:30.04:0,30,309	0/0:22,0:22:48.07:0,48,510	0/0:14,0:14:33.05:0,33,340	0/0:17,0:12:29.84:0,30,289	0/0:22,0:22:48.01:0,48,483	0/0:6,0:5:12.01:0,12,124	0/0:16,0:16:33.03:0,33,336	0/0:14,0:14:39.08:0,39,406	0/0:21,0:21:51.05:0,51,522	0/0:20,0:19:53.28:0,53,523	0/0:26,0:25:59.97:0,60,665	0/0:28,0:26:69.02:0,69,696	0/0:10,0:10:27.07:0,27,286
chr10	80618413	.	T	TA	1310.12	PASS	AB=0.750;AC=11;AF=0.196;AN=56;BaseQRankSum=-3.893;DP=375;FS=1.718;HRun=8;HaplotypeScore=32.0431;InbreedingCoeff=0.7814;MQ=51.36;MQ0=29;MQRankSum=0.251;QD=22.98;ReadPosRankSum=-0.078;VQSLOD=3.3209;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:19:48.14:554,48,0	0/0:6,0:6:18.01:0,18,165	0/0:9,0:4:6:0,6,55	0/0:2,0:2:2.99:0,3,25	0/0:21,0:20:57.03:0,57,521	1/1:2,9:9:21.06:242,21,0	1/1:1,2:2:3.01:35,3,0	0/0:19,0:14:39:0,39,352	0/0:15,0:14:39.01:0,39,352	0/0:21,0:18:48:0,48,436	0/0:18,0:18:42.01:0,42,382	0/0:8,0:7:21.01:0,21,192	1/1:1,5:6:15.04:173,15,0	1/1:0,14:14:39.12:450,39,0	0/0:21,0:18:54.03:0,54,494	0/0:10,0:9:24.01:0,24,220	0/0:24,0:19:51.03:0,51,466	0/0:17,0:14:33:0,33,301	0/0:7,0:6:17.98:0,18,156	0/0:12,0:10:27.01:0,27,247	0/0:10,0:8:21:0,21,192	0/1:2,1:3:25.58:26,0,46	0/0:16,0:14:42.02:0,42,384	0/0:9,0:9:24:0,24,218	0/0:18,0:17:38.94:0,39,357	0/0:24,0:23:69.03:0,69,631	0/0:17,0:16:48.03:0,48,438	0/0:14,0:13:36.01:0,36,330
chr10	80618609	.	GA	G	5125.93	PASS	AB=0.963;AC=35;AF=0.625;AN=56;BaseQRankSum=-3.915;DP=471;FS=0.398;HRun=11;HaplotypeScore=70.8832;InbreedingCoeff=0.7739;MQ=63.46;MQ0=3;MQRankSum=4.572;QD=15.49;ReadPosRankSum=2.820;VQSLOD=5.5436;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:19:37.29:0,37,202	1/1:0,1:1:3:25,3,0	0/1:12,0:7:2.75:3,0,56	0/1:14,1:7:7.76:8,0,97	1/1:2,15:17:41.93:345,42,0	0/0:6,0:14:34.89:0,35,185	0/0:6,0:8:20.33:0,20,128	1/1:3,20:24:58.94:474,59,0	0/0:15,1:17:23.28:0,23,421	1/1:2,18:22:54.98:428,55,0	1/1:2,9:12:17:129,17,0	0/1:16,1:19:0.72:1,0,336	0/0:4,0:12:19.99:0,20,104	0/0:15,0:27:56.14:0,56,324	1/1:2,20:22:53.92:443,54,0	1/1:3,15:20:45.23:339,45,0	1/1:2,20:22:41.94:345,42,0	1/1:6,13:19:6.91:263,7,0	1/1:4,19:23:24.88:405,25,0	1/1:1,14:15:38.94:320,39,0	1/1:3,6:9:1.18:128,1,0	0/0:7,0:8:17.88:0,18,174	0/0:14,0:16:38.92:0,39,392	0/0:15,0:16:41.94:0,42,430	1/1:3,9:12:23.97:197,24,0	1/1:3,25:28:74.91:616,75,0	1/1:4,19:24:29.96:442,30,0	1/1:3,11:14:23.34:216,23,0
chr10	80618626	.	C	CAA	815.07	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.060;DP=519;FS=4.728;HRun=9;HaplotypeScore=99.2092;InbreedingCoeff=0.9494;MQ=68.43;MQ0=5;MQRankSum=-5.717;QD=9.70;ReadPosRankSum=-4.209;VQSLOD=0.4003;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:16:24.25:202,24,0	0/0:3,0:3:9:0,9,87	0/0:21,0:12:9.90:0,10,167	0/0:19,0:11:15.68:0,16,166	0/0:20,0:20:54.10:0,54,566	1/1:11,4:19:32.69:351,33,0	1/1:5,8:12:17.85:234,18,0	0/0:26,0:26:66.12:0,66,696	0/0:17,0:17:35.11:0,35,381	0/0:21,0:21:54.13:0,54,574	0/0:12,0:12:33.08:0,33,351	0/0:17,0:17:36.06:0,36,383	1/1:10,0:10:15.47:70,15,0	1/1:24,0:24:8.59:128,9,0	0/0:22,0:22:42.08:0,42,447	0/0:23,0:23:60.14:0,60,637	0/0:25,0:25:54.10:0,54,567	0/0:18,0:19:39.01:0,39,470	0/0:26,0:26:66.15:0,66,702	0/0:16,0:16:32.93:0,33,334	0/0:14,0:14:39.06:0,39,406	0/0:10,0:10:18.02:0,18,191	0/0:17,0:17:48.03:0,48,475	0/0:19,0:19:45.10:0,45,478	0/0:13,0:13:33.08:0,33,350	0/0:34,0:34:87.12:0,87,906	0/0:24,0:23:66.14:0,66,694	0/0:17,0:17:39.08:0,39,415
chr10	80619482	.	CA	C	1042.35	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.669;DP=500;FS=2.259;HRun=4;HaplotypeScore=51.6283;InbreedingCoeff=0.9837;MQ=86.28;MQ0=0;MQRankSum=-3.761;QD=28.17;ReadPosRankSum=2.498;VQSLOD=3.0715;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.16:0,48,672	0/0:7,0:7:21.07:0,21,294	0/0:21,0:21:49.63:0,50,615	0/0:13,0:13:27.80:0,28,348	0/0:31,0:31:93.29:0,93,1262	1/1:1,23:24:63.18:719,63,0	1/1:0,13:13:39.11:445,39,0	0/0:35,0:35:99:0,102,1414	0/0:11,0:11:33.10:0,33,444	0/0:26,0:26:75.25:0,75,1037	0/0:14,0:14:39.12:0,39,530	0/0:6,0:6:18.06:0,18,252	0/0:16,0:16:48.15:0,48,654	0/0:20,0:20:60.19:0,60,823	0/0:12,0:12:33.10:0,33,444	0/0:19,0:19:48.14:0,48,641	0/0:13,0:13:36.08:0,36,482	0/0:9,0:8:27.09:0,27,375	0/0:27,0:27:81.24:0,81,1087	0/0:25,0:25:75.25:0,75,1049	0/0:18,0:18:48.16:0,48,672	0/0:20,0:20:54.17:0,54,740	0/0:18,0:18:51.17:0,51,714	0/0:10,0:10:30.09:0,30,404	0/0:10,0:9:27.08:0,27,361	0/0:22,0:22:66.22:0,66,924	0/0:38,0:38:99:0,111,1498	0/0:5,0:5:15.05:0,15,210
chr10	80619908	.	G	GTA	285.03	PASS	AB=1.000;AC=9;AF=0.173;AN=52;BaseQRankSum=-1.256;DP=316;FS=0.000;HRun=0;HaplotypeScore=45.7393;InbreedingCoeff=0.6882;MQ=62.01;MQ0=3;MQRankSum=0.182;QD=11.40;ReadPosRankSum=0.861;VQSLOD=2.8059;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:2.03:6,2,0	0/0:6,0:6:15.05:0,15,191	./.	0/0:10,0:4:0:0,0,0	0/0:26,0:26:63.19:0,63,787	0/1:7,0:7:0:0,0,0	1/1:1,0:1:2.99:24,3,0	0/0:36,0:36:78.25:0,78,992	0/0:10,0:10:27.09:0,27,343	0/0:11,0:11:33.11:0,33,420	0/0:15,0:15:30.09:0,30,369	0/0:7,0:7:15.03:0,15,178	./.	1/1:2,0:2:2.51:24,3,0	0/0:7,0:7:21.07:0,21,267	0/0:13,0:13:33.11:0,33,420	0/0:20,0:20:39.05:0,39,496	0/0:15,0:14:33.10:0,33,411	0/0:13,0:12:29.83:0,30,351	0/0:18,0:18:36.11:0,36,457	0/0:11,0:11:29.97:0,30,381	0/0:3,0:3:6.02:0,6,76	0/0:6,0:6:6.02:0,6,76	0/0:4,0:4:6.01:0,6,63	1/1:1,9:9:21.07:351,21,0	0/0:18,0:18:51.02:0,51,615	0/0:24,0:24:66.20:0,66,825	0/0:10,0:9:22.31:0,22,270
chr10	80619928	.	ATG	A	89.22	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=3.128;DP=377;FS=3.695;HRun=0;HaplotypeScore=49.3194;InbreedingCoeff=0.7197;MQ=54.61;MQ0=10;MQRankSum=-0.113;QD=3.08;ReadPosRankSum=-0.808;VQSLOD=1.5480;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,8:11:0.89:3,1,0	0/0:9,0:9:24.05:0,24,351	0/0:22,0:7:11.91:0,12,87	0/0:27,0:14:26.06:0,26,204	0/0:24,0:24:63.19:0,63,1003	1/1:8,0:8:6.01:62,6,0	1/1:1,2:3:3.01:38,3,0	0/0:37,0:36:66.19:0,66,1004	0/0:11,0:11:27.06:0,27,399	0/0:15,0:15:45.14:0,45,704	0/0:14,0:14:33.09:0,33,493	0/0:8,0:8:24.07:0,24,376	1/1:0,5:5:2.86:38,3,0	1/1:0,2:2:6.02:75,6,0	0/0:7,0:7:21.04:0,21,301	0/0:16,0:16:42.11:0,42,650	0/0:23,0:23:47.71:0,48,728	0/0:15,0:14:16.35:0,16,326	0/0:11,0:10:23.85:0,24,323	0/0:17,0:17:45.11:0,45,676	0/0:12,0:12:24.07:0,24,369	0/0:2,0:2:3.01:0,3,50	0/0:9,0:9:24.05:0,24,345	0/0:5,0:4:6.02:0,6,100	0/0:11,0:10:30.08:0,30,451	0/0:19,0:19:45.13:0,45,683	0/0:23,0:23:63.15:0,63,959	0/0:11,0:10:27.09:0,27,448
chr10	80620318	.	A	AC	1643.84	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.048;DP=484;FS=5.126;HRun=0;HaplotypeScore=47.1013;InbreedingCoeff=0.9777;MQ=83.64;MQ0=0;MQRankSum=-2.699;QD=40.09;ReadPosRankSum=1.347;VQSLOD=3.9399;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:27.08:0,27,360	0/0:8,0:8:24.08:0,24,336	0/0:10,0:10:29.92:0,30,373	0/0:18,0:18:50.95:0,51,676	0/0:22,0:22:60.20:0,60,838	1/1:0,24:24:69.24:1097,69,0	1/1:0,17:17:42.14:668,42,0	0/0:28,0:28:75.25:0,75,1049	0/0:21,0:21:63.20:0,63,864	0/0:32,0:32:96.32:0,96,1339	0/0:16,0:16:39.13:0,39,545	0/0:10,0:10:30.10:0,30,420	0/0:24,0:24:72.24:0,72,1002	0/0:15,0:15:45.15:0,45,628	0/0:18,0:18:54.18:0,54,755	0/0:17,0:17:48.16:0,48,668	0/0:11,0:11:33.07:0,33,439	0/0:5,0:5:12.04:0,12,168	0/0:21,0:21:63.21:0,63,881	0/0:27,0:27:78.23:0,78,1057	0/0:23,0:23:69.23:0,69,962	0/0:21,0:21:63.21:0,63,881	0/0:11,0:11:33.11:0,33,461	0/0:10,0:10:30.09:0,30,404	0/0:13,0:13:39.13:0,39,546	0/0:24,0:24:72.23:0,72,993	0/0:23,0:23:63.21:0,63,880	0/0:6,0:6:18.06:0,18,252
chr10	80620687	.	TG	T	1532.49	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.187;DP=588;FS=1.116;HRun=6;HaplotypeScore=58.3300;InbreedingCoeff=0.9911;MQ=85.51;MQ0=0;MQRankSum=-3.976;QD=25.12;ReadPosRankSum=2.487;VQSLOD=3.8478;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,9:12:24.06:258,24,0	0/0:9,0:9:24.08:0,24,316	0/0:12,0:12:31.20:0,31,343	0/0:25,0:26:53.40:0,53,744	0/0:27,0:27:75.23:0,75,968	0/0:25,0:25:75.19:0,75,952	0/0:14,0:14:42.14:0,42,549	0/0:33,0:33:90.18:0,90,1083	0/0:25,0:25:72.23:0,72,941	0/0:31,0:31:81.26:0,81,1054	0/0:26,0:26:72.23:0,72,945	0/0:15,0:15:39.13:0,39,513	1/1:2,22:24:60.15:644,60,0	1/1:1,24:25:72.18:773,72,0	0/0:26,0:26:75.24:0,75,982	0/0:20,0:20:57.16:0,57,720	0/0:8,0:8:18.06:0,18,236	0/0:7,0:7:17.98:0,18,199	0/0:20,0:20:59.91:0,60,735	0/0:41,0:41:99:0,111,1430	0/0:13,0:13:39.03:0,39,444	0/0:21,0:21:57.17:0,57,733	0/0:22,0:22:57.19:0,57,749	0/0:15,0:15:39.10:0,39,483	0/0:22,0:22:66.21:0,66,867	0/0:16,0:16:48.14:0,48,607	0/0:45,0:43:99:0,123,1554	0/0:8,0:8:21.07:0,21,276
chr10	80621070	.	A	AGCATATG	9111.01	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-6.614;DP=546;FS=0.935;HRun=0;HaplotypeScore=117.7480;InbreedingCoeff=0.9720;MQ=80.37;MQ0=0;MQRankSum=-14.022;QD=94.91;ReadPosRankSum=-0.034;VQSLOD=5.8526;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,10:13:33.07:1235,33,0	0/0:8,0:8:24.07:0,24,590	0/0:17,0:17:38.49:0,38,920	0/0:14,0:14:29.86:0,30,644	0/0:36,0:36:99:0,108,2811	1/1:9,17:28:66.19:2544,66,0	1/1:4,5:10:24.08:936,24,0	0/0:30,0:30:87.28:0,87,2212	0/0:19,0:19:57.18:0,57,1454	0/0:27,0:27:81.28:0,81,2184	0/0:30,0:30:84.29:0,84,2184	0/0:13,0:13:39.12:0,39,928	1/1:5,14:20:51.18:2003,51,0	1/1:6,17:25:63.22:2393,63,0	0/0:26,0:26:78.27:0,78,2097	0/0:16,0:16:48.16:0,48,1294	0/0:2,0:2:6.02:0,6,162	0/0:8,0:8:21.07:0,21,509	0/0:25,0:25:72.25:0,72,1863	0/0:35,0:35:99:0,105,2819	0/0:15,0:15:42.14:0,42,1097	0/0:25,0:25:72.25:0,72,1895	0/0:23,0:23:66.23:0,66,1770	0/0:6,0:6:18.06:0,18,485	0/0:17,0:16:51.18:0,51,1375	0/0:22,0:22:66.23:0,66,1773	0/0:26,0:26:78.27:0,78,2060	0/0:10,0:10:30.10:0,30,769
chr10	80622108	.	C	CAAA	2145.94	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-0.849;DP=511;FS=18.860;HRun=10;HaplotypeScore=73.0735;InbreedingCoeff=0.9796;MQ=81.06;MQ0=0;MQRankSum=-3.354;QD=23.33;ReadPosRankSum=-1.106;VQSLOD=0.3158;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,8:16:27.05:429,27,0	0/0:12,0:12:33.09:0,33,401	0/0:14,0:14:14.86:0,15,159	0/0:14,0:16:18.87:0,19,245	0/0:19,0:22:56.82:0,57,705	1/1:7,13:21:29.80:559,30,0	1/1:6,10:17:33.07:509,33,0	0/0:35,0:35:96.23:0,96,1157	0/0:16,0:16:48.15:0,48,584	0/0:26,0:26:66.17:0,66,803	0/0:24,0:24:57.10:0,57,691	0/0:10,0:10:24.04:0,24,289	1/1:2,14:18:30.06:455,30,0	1/1:2,17:20:21.07:370,21,0	0/0:19,0:19:54.15:0,54,657	0/0:12,0:12:24.01:0,24,292	0/0:14,0:14:33.07:0,33,401	0/0:11,0:11:20.97:0,21,255	0/0:13,0:15:34.37:0,34,397	0/0:24,0:25:56.99:0,57,647	0/0:18,0:19:52.52:0,53,654	0/0:11,0:11:27.06:0,27,328	0/0:26,0:26:56.26:0,56,651	0/0:5,0:7:11.75:0,12,177	0/0:21,0:21:45:0,45,536	0/0:24,0:24:66.17:0,66,794	0/0:30,0:31:81.01:0,81,920	0/0:8,0:8:14.97:0,15,182
chr10	80623053	.	TA	T	1774.79	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.689;DP=514;FS=16.937;HRun=9;HaplotypeScore=52.7681;InbreedingCoeff=0.9894;MQ=72.47;MQ0=0;MQRankSum=-0.936;QD=23.35;ReadPosRankSum=1.104;VQSLOD=2.5985;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:36.02:329,36,0	0/0:8,0:8:21.06:0,21,242	0/0:16,0:16:36.10:0,36,411	0/0:12,0:10:18.05:0,18,201	0/0:33,0:33:87.26:0,87,1004	1/1:0,21:21:63.03:577,63,0	1/1:2,7:9:18.01:165,18,0	0/0:23,0:23:54.15:0,54,615	0/0:18,0:18:48.14:0,48,554	0/0:21,0:21:57.17:0,57,658	0/0:26,0:26:69.20:0,69,794	0/0:7,0:7:18.05:0,18,208	1/1:0,20:20:60.03:549,60,0	1/1:0,13:13:36.02:330,36,0	0/0:19,0:19:51.15:0,51,587	0/0:15,0:15:36.09:0,36,405	0/0:19,0:19:48.14:0,48,554	0/0:5,0:5:15:0,15,158	0/0:18,0:18:45.13:0,45,519	0/0:35,1:36:65.80:0,66,1004	0/0:10,0:10:30.09:0,30,346	0/0:24,1:25:41.73:0,42,724	0/0:22,0:22:60.13:0,60,669	0/0:13,0:13:39.12:0,39,450	0/0:27,0:27:75.19:0,75,837	0/0:19,0:19:51.15:0,51,589	0/0:33,1:34:65.80:0,66,1001	0/0:12,0:12:36.11:0,36,415
chr10	80623162	.	TA	T	1420.13	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=10.225;DP=512;FS=7.808;HRun=3;HaplotypeScore=78.8187;InbreedingCoeff=0.8831;MQ=70.50;MQ0=0;MQRankSum=-0.617;QD=12.35;ReadPosRankSum=3.661;VQSLOD=1.7629;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,10:15:41.99:439,42,0	0/0:11,0:11:33.09:0,33,438	0/0:16,0:15:26.96:0,27,283	0/0:13,0:13:32.72:0,33,373	0/0:28,0:28:76.79:0,77,1060	1/1:31,0:31:16.80:141,17,0	1/1:15,1:16:27.92:165,28,0	0/0:27,0:27:69.13:0,69,803	0/0:10,0:10:23.23:0,23,197	0/0:29,1:30:58.95:0,59,1018	0/0:19,0:19:51.16:0,51,713	0/0:7,0:7:18.01:0,18,165	1/1:0,22:22:48.15:593,48,0	1/1:2,11:13:21.03:243,21,0	0/1:18,0:18:11.63:17,0,12	0/0:16,0:16:48.16:0,48,689	0/0:11,0:11:30.06:0,30,409	0/0:7,0:7:21.03:0,21,278	0/0:17,0:17:50.73:0,51,626	0/0:33,0:33:99:0,99,1266	0/0:21,0:21:59.68:0,60,802	0/0:26,0:26:59.98:0,60,553	0/0:22,0:22:47.65:0,48,404	0/0:14,0:14:36.01:0,36,323	0/0:16,0:16:45.14:0,45,616	0/0:20,0:20:60.18:0,60,824	0/0:28,1:29:47.21:0,47,1061	0/0:4,0:4:12.03:0,12,155
chr10	80623165	.	A	AC	1456.29	PASS	AB=0.698;AC=10;AF=0.179;AN=56;BaseQRankSum=-4.219;DP=518;FS=5.722;HRun=9;HaplotypeScore=83.2915;InbreedingCoeff=0.7475;MQ=71.19;MQ0=0;MQRankSum=0.501;QD=14.56;ReadPosRankSum=-0.800;VQSLOD=3.6567;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:23.79:0,24,146	0/0:11,0:11:32.95:0,33,278	0/1:13,4:16:38.55:88,0,39	0/0:16,0:16:7.11:0,7,123	0/0:28,0:29:68.88:0,69,576	0/0:33,0:33:43.18:0,43,389	0/0:20,0:20:6.82:0,7,149	0/0:23,0:23:35.98:0,36,312	1/1:2,9:11:24.05:257,24,0	0/0:28,0:28:75.18:0,75,622	0/0:17,0:17:44.95:0,45,383	1/1:1,7:8:18.05:199,18,0	0/0:22,0:22:42.85:0,43,179	0/0:12,0:12:18.21:0,18,73	0/0:2,0:17:28.52:0,29,84	0/0:16,0:16:47.99:0,48,417	0/0:11,0:11:29.99:0,30,260	0/0:7,0:7:17.99:0,18,156	0/0:19,0:19:47.77:0,48,392	0/0:31,0:31:86.80:0,87,728	0/0:20,0:21:53.02:0,53,449	0/1:8,19:27:3.42:416,0,3	1/1:7,16:23:30.01:332,30,0	1/1:3,11:14:30.08:332,30,0	0/0:15,0:15:41.97:0,42,360	0/0:20,1:21:23.77:0,24,435	0/0:28,0:28:74.66:0,75,635	0/0:4,0:4:9:0,9,78
chr10	80623167	.	C	CA	569.89	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=9.651;DP=525;FS=16.943;HRun=0;HaplotypeScore=87.6504;InbreedingCoeff=0.3030;MQ=70.93;MQ0=0;MQRankSum=0.280;QD=3.63;ReadPosRankSum=2.192;VQSLOD=2.0993;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:47.41:0,47,455	0/0:11,0:11:33.11:0,33,459	0/1:16,0:15:10.36:10,0,225	0/0:16,0:16:37.65:0,38,392	0/0:30,0:30:79.97:0,80,1016	1/1:30,3:33:39.10:271,39,0	1/1:19,2:21:34.55:260,35,0	0/0:21,0:21:63.14:0,63,747	0/1:12,0:12:9.66:33,0,10	0/0:28,0:28:81.20:0,81,1078	0/0:21,0:21:51.15:0,51,676	0/1:8,0:8:10.12:24,0,10	0/0:21,0:21:51.10:0,51,523	0/0:11,0:11:21.03:0,21,212	0/0:16,0:16:44.22:0,44,285	0/0:16,0:16:48.16:0,48,669	0/0:11,0:11:30.10:0,30,417	0/0:8,0:8:21.05:0,21,274	0/0:19,0:19:57.16:0,57,734	0/0:33,0:33:93.29:0,93,1256	0/0:21,0:21:63.08:0,63,799	0/1:29,0:29:39.37:39,0,196	0/1:23,0:23:51.16:51,0,62	0/1:15,0:15:36.21:36,0,65	0/0:14,0:14:42.14:0,42,585	0/0:21,0:21:56.77:0,57,799	0/0:28,0:28:81.24:0,81,1076	0/0:4,0:4:12.03:0,12,150
chr10	80623543	.	GA	G	875.77	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.701;DP=524;FS=1.430;HRun=6;HaplotypeScore=51.0540;InbreedingCoeff=0.9805;MQ=64.90;MQ0=0;MQRankSum=0.989;QD=22.46;ReadPosRankSum=1.748;VQSLOD=2.7864;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:25:35.82:0,36,800	0/0:10,0:10:30.10:0,30,395	0/0:17,0:16:46.59:0,47,553	0/0:11,0:11:24.08:0,24,315	0/0:22,0:22:54.16:0,54,695	1/1:3,23:26:66.16:709,66,0	1/1:3,10:13:27.06:288,27,0	0/0:28,0:28:78.25:0,78,1013	0/0:22,0:22:66.21:0,66,866	0/0:28,0:28:84.27:0,84,1105	0/0:21,0:21:60.18:0,60,775	0/0:12,0:12:33.11:0,33,433	0/0:13,0:13:33.11:0,33,434	0/0:17,0:17:48.16:0,48,631	0/0:20,0:20:54.16:0,54,695	0/0:19,0:19:54.17:0,54,697	0/0:19,0:19:50.51:0,51,625	0/0:12,0:12:32.47:0,32,400	0/0:13,0:13:12.19:0,12,374	0/0:23,0:23:63.20:0,63,829	0/0:15,0:15:39.13:0,39,511	0/0:21,0:21:57.19:0,57,750	0/0:21,0:21:57.19:0,57,749	0/0:14,0:14:40.94:0,41,517	0/0:18,0:18:54.18:0,54,711	0/0:31,0:31:75.24:0,75,987	0/0:26,0:26:78.25:0,78,1022	0/0:7,0:7:21.07:0,21,276
chr10	80624958	.	GATAC	G	1286.93	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.639;DP=585;FS=9.940;HRun=0;HaplotypeScore=114.0897;InbreedingCoeff=0.7822;MQ=63.63;MQ0=8;MQRankSum=-0.045;QD=17.39;ReadPosRankSum=0.651;VQSLOD=2.8592;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,10:27:24.08:373,24,0	0/0:6,0:6:12.04:0,12,250	0/0:25,0:10:3.90:0,4,74	0/0:21,0:14:0.01:0,0,36	0/0:30,0:30:69.21:0,69,1513	0/0:25,0:24:12.15:0,12,280	1/1:6,0:6:2.50:9,2,0	0/0:47,0:47:72.21:0,72,1366	0/0:15,0:15:39.13:0,39,876	0/0:16,0:16:36.12:0,36,830	0/0:24,0:24:45.02:0,45,997	0/0:12,0:12:36.12:0,36,835	1/1:4,18:22:42.10:644,42,0	1/1:7,11:18:27.07:407,27,0	0/0:25,0:25:48.14:0,48,1055	0/0:31,0:31:75.26:0,75,1756	0/0:17,0:17:36.12:0,36,805	0/0:11,0:11:21.07:0,21,460	0/0:16,0:14:27.08:0,27,585	0/0:23,0:23:48.16:0,48,1101	0/0:21,0:21:5.31:0,5,971	0/0:7,0:7:18.06:0,18,429	0/0:19,0:19:45.15:0,45,1007	0/0:9,0:9:21.07:0,21,492	0/0:22,0:22:45.15:0,45,1058	0/0:41,0:41:93.32:0,93,2178	0/0:23,1:24:9.15:0,9,1148	0/0:24,0:24:51.17:0,51,1116
chr10	80624986	.	C	CATGG	677.27	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=5.688;DP=629;FS=1.988;HRun=0;HaplotypeScore=115.4063;InbreedingCoeff=0.4273;MQ=56.73;MQ0=11;MQRankSum=-1.437;QD=7.28;ReadPosRankSum=-0.394;VQSLOD=2.2988;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:28:18.96:19,0,138	0/0:6,0:6:18.06:0,18,322	0/0:30,0:13:21.91:0,22,475	0/0:19,0:8:17.83:0,18,211	0/0:30,0:30:87.27:0,87,1542	1/1:1,19:21:27.05:677,27,0	1/1:0,5:5:2.88:15,3,0	0/0:52,0:52:99:0,147,2490	0/0:21,0:21:63.22:0,63,1137	0/0:24,0:24:72.25:0,72,1334	0/0:25,0:25:72.25:0,72,1309	0/0:19,0:19:54.18:0,54,994	0/1:24,0:24:78.14:78,0,120	0/1:14,0:14:19.65:20,0,96	0/0:23,0:23:69.20:0,69,1212	0/0:28,0:28:84.29:0,84,1594	0/0:14,0:14:36.12:0,36,686	0/0:10,0:10:27.09:0,27,483	0/0:18,0:16:48.14:0,48,818	0/0:30,0:30:84.27:0,84,1483	0/0:34,0:34:99:0,102,1741	0/0:14,0:14:39.13:0,39,690	0/0:23,0:23:66.23:0,66,1203	0/0:11,0:11:33.11:0,33,597	0/0:18,0:18:54.19:0,54,1022	0/0:38,0:38:99:0,105,1974	0/0:26,0:26:75.24:0,75,1314	0/0:23,0:23:57.19:0,57,1019
chr10	80628452	.	A	AT	1141.35	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.992;DP=637;FS=2.293;HRun=5;HaplotypeScore=61.2132;InbreedingCoeff=0.9886;MQ=57.59;MQ0=2;MQRankSum=1.534;QD=25.94;ReadPosRankSum=-0.939;VQSLOD=2.7413;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:80.23:0,80,844	0/0:12,0:12:33.07:0,33,347	0/0:12,0:9:21.05:0,21,225	0/0:11,0:7:14.95:0,15,137	0/0:26,0:26:60.15:0,60,644	1/1:3,23:26:51.17:671,51,0	1/1:0,18:18:45.15:592,45,0	0/0:35,0:35:99:0,102,1087	0/0:15,0:15:42.10:0,42,451	0/0:32,0:32:90.22:0,90,966	0/0:27,0:27:66.16:0,66,709	0/0:23,0:23:66.17:0,66,709	0/0:29,0:29:69.17:0,69,741	0/0:15,0:15:30.08:0,30,322	0/0:32,0:32:93.23:0,93,999	0/0:18,0:18:51.13:0,51,547	0/0:22,0:22:36.30:0,36,523	0/0:13,0:13:39.10:0,39,419	0/0:29,0:26:75.17:0,75,796	0/0:23,0:23:66.17:0,66,709	0/0:23,0:23:60.15:0,60,645	0/0:28,0:28:84.19:0,84,893	0/0:19,0:19:48.11:0,48,516	0/0:23,0:23:63.14:0,63,669	0/0:19,0:19:54.13:0,54,580	0/0:29,0:29:81.19:0,81,864	0/0:34,0:34:93.23:0,93,999	0/0:12,0:12:27.04:0,27,280
chr10	80630339	.	TGAATC	T	3699.44	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=11.307;DP=551;FS=11.299;HRun=0;HaplotypeScore=101.3849;InbreedingCoeff=0.8218;MQ=62.45;MQ0=1;MQRankSum=-6.420;QD=40.65;ReadPosRankSum=2.847;VQSLOD=3.3394;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:22:51.18:1056,51,0	0/0:10,0:10:27.09:0,27,801	0/0:20,1:19:2.42:0,2,1329	0/0:16,0:16:48.16:0,48,1425	0/0:30,0:30:81.28:0,81,2486	1/1:0,20:20:36.12:746,36,0	1/1:1,5:6:12.04:248,12,0	0/0:30,0:30:78.26:0,78,2222	0/0:16,0:15:39.13:0,39,1185	0/0:30,0:30:81.28:0,81,2425	0/0:27,0:27:69.24:0,69,2119	0/0:18,0:18:51.18:0,51,1534	1/1:2,19:21:51.18:1056,51,0	1/1:2,10:11:27.09:559,27,0	0/0:17,0:17:48.16:0,48,1427	0/0:13,0:13:33.11:0,33,1003	0/0:24,0:24:63.22:0,63,1934	0/0:29,0:29:60.02:0,60,1789	0/0:13,0:13:30.10:0,30,839	0/0:37,0:37:99:0,102,2946	0/0:17,0:17:48.16:0,48,1468	0/0:12,0:12:30.10:0,30,922	0/0:24,0:24:63.22:0,63,1934	0/1:10,0:10:33:33,0,710	0/0:14,0:13:39.13:0,39,1198	0/0:28,0:28:75.26:0,75,2291	0/0:32,0:32:81.08:0,81,2441	0/0:2,0:2:6.02:0,6,184
chr10	80632020	.	GTA	G	243.08	PASS	AB=1.000;AC=9;AF=0.180;AN=50;BaseQRankSum=4.782;DP=182;FS=0.000;HRun=0;HaplotypeScore=25.9783;InbreedingCoeff=0.4259;MQ=76.76;MQ0=2;MQRankSum=1.669;QD=5.52;ReadPosRankSum=2.544;VQSLOD=1.3269;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,3:4:9.03:116,9,0	0/0:2,0:2:3.01:0,3,51	0/0:13,0:6:5.42:0,5,41	0/1:26,0:11:9.47:9,0,69	0/0:4,0:4:6.02:0,6,101	1/1:6,0:6:8.87:58,9,0	0/0:2,0:2:3:0,3,25	0/0:44,0:44:99:0,102,1639	0/0:1,0:1:3.01:0,3,51	0/0:3,0:3:3.01:0,3,50	0/0:4,0:4:6.01:0,6,76	./.	1/1:0,4:4:6.02:77,6,0	1/1:0,3:3:9.03:116,9,0	0/0:2,0:2:6.02:0,6,101	0/0:1,0:1:3.01:0,3,51	0/0:4,0:3:6.02:0,6,101	0/0:3,0:3:9.03:0,9,138	0/0:15,0:15:32.85:0,33,505	0/0:7,0:7:15.02:0,15,197	0/0:2,0:2:3.01:0,3,51	./.	0/0:2,0:2:3.01:0,3,51	./.	0/0:6,0:6:6.02:0,6,99	0/0:4,0:4:12.04:0,12,200	0/0:6,0:6:9.01:0,9,125	0/0:12,0:12:30.10:0,30,492
chr10	80632734	.	A	AATAC	2170.69	PASS	AB=0.775;AC=13;AF=0.232;AN=56;BaseQRankSum=5.681;DP=580;FS=6.618;HRun=0;HaplotypeScore=120.5318;InbreedingCoeff=0.6748;MQ=73.27;MQ0=16;MQRankSum=-3.528;QD=11.86;ReadPosRankSum=-2.028;VQSLOD=2.4474;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:22:32.92:366,33,0	0/0:6,0:9:15.64:0,16,247	0/0:31,0:19:47.94:0,48,478	0/0:33,0:24:38.89:0,39,473	0/0:16,0:22:38.88:0,39,348	1/1:3,24:31:33.08:738,33,0	1/1:1,10:12:27.08:687,27,0	0/1:28,0:27:1.47:1,0,565	0/0:15,0:19:8.23:0,8,688	0/0:20,0:24:16.66:0,17,512	0/0:12,0:22:30.78:0,31,308	0/0:7,0:10:17.16:0,17,320	1/1:7,0:22:17.24:223,17,0	1/1:4,0:25:15.05:302,15,0	0/0:9,0:15:26.99:0,27,292	0/0:8,0:14:14.89:0,15,122	0/1:10,0:18:16.05:16,0,124	0/0:13,0:15:20.88:0,21,146	0/0:8,0:14:4.80:0,5,87	0/0:20,0:35:50.93:0,51,556	0/0:10,0:17:22.39:0,22,278	0/0:15,0:15:44.90:0,45,610	0/0:16,0:16:45.05:0,45,668	0/0:19,0:23:63.04:0,63,834	0/0:9,0:24:15.07:0,15,147	0/0:5,0:16:7.37:0,7,117	0/1:10,0:22:14.73:15,0,132	0/0:8,0:13:17.55:0,18,249
chr10	80632942	.	T	TA	1487.81	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.544;DP=428;FS=4.665;HRun=7;HaplotypeScore=45.7766;InbreedingCoeff=0.9458;MQ=90.30;MQ0=0;MQRankSum=-1.675;QD=28.61;ReadPosRankSum=3.902;VQSLOD=4.1074;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:33.10:398,33,0	0/0:4,0:4:12.02:0,12,116	0/0:20,0:20:42.03:0,42,395	0/0:16,0:16:42.06:0,42,401	0/0:22,0:22:63.10:0,63,608	0/0:16,0:16:39.06:0,39,377	0/0:15,0:15:36.05:0,36,348	0/0:30,0:30:66.09:0,66,633	0/0:17,0:17:42.07:0,42,405	0/0:19,0:19:51.08:0,51,492	0/0:19,0:19:54.09:0,54,521	0/0:16,0:16:33.05:0,33,319	1/1:1,17:18:48.15:580,48,0	1/1:1,19:20:54.17:652,54,0	0/0:19,0:19:54.07:0,54,516	0/0:12,0:12:36.06:0,36,348	0/0:12,0:12:33.05:0,33,318	0/0:6,0:6:9.01:0,9,86	0/0:16,0:16:39.06:0,39,376	0/0:20,0:20:60.08:0,60,573	0/0:8,0:8:18.02:0,18,174	0/0:12,0:12:33.05:0,33,318	0/0:18,0:18:51.07:0,51,487	0/0:9,0:9:27.04:0,27,261	0/0:15,0:15:42.03:0,42,397	0/0:12,0:12:33.04:0,33,314	0/0:20,0:20:57.07:0,57,544	0/0:3,0:3:9.01:0,9,87
chr10	80634302	.	T	TG	739.11	PASS	AB=0.943;AC=13;AF=0.232;AN=56;BaseQRankSum=0.534;DP=398;FS=7.179;HRun=8;HaplotypeScore=50.6511;InbreedingCoeff=0.7249;MQ=83.06;MQ0=0;MQRankSum=-2.973;QD=6.84;ReadPosRankSum=0.250;VQSLOD=0.1668;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:22.44:107,22,0	0/0:3,0:3:9:0,9,82	0/0:15,0:15:35.74:0,36,309	0/1:13,0:13:1.98:2,0,143	0/0:10,0:10:27.01:0,27,247	1/1:0,3:3:9.03:104,9,0	1/1:5,17:22:45.13:519,45,0	0/0:21,0:21:44.98:0,45,404	0/0:12,0:12:36.02:0,36,330	0/0:21,0:21:54.02:0,54,493	0/0:10,0:10:30:0,30,271	0/0:7,0:7:18:0,18,160	1/1:9,0:9:9.76:87,10,0	1/1:11,0:11:14.20:70,14,0	0/0:12,0:12:36.02:0,36,329	0/0:11,0:12:35.06:0,35,308	0/0:22,0:22:54.01:0,54,494	0/0:10,0:10:14.53:0,15,183	0/0:16,0:16:39.02:0,39,357	0/0:16,0:16:36.02:0,36,330	0/0:18,0:18:39:0,39,357	0/1:11,1:12:1.60:2,0,242	0/0:17,0:17:42.01:0,42,384	0/1:17,2:19:18.23:18,0,355	0/0:24,0:24:57.02:0,57,521	0/0:13,0:13:33.01:0,33,302	0/0:21,0:21:63.03:0,63,577	0/0:10,0:10:21.01:0,21,192
chr10	80634308	.	G	GGGGA	1431.84	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-1.785;DP=386;FS=5.572;HRun=0;HaplotypeScore=68.2405;InbreedingCoeff=0.9225;MQ=85.38;MQ0=0;MQRankSum=-2.582;QD=40.91;ReadPosRankSum=0.394;VQSLOD=3.2309;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,12:16:27.08:619,27,0	0/0:3,0:3:9.03:0,9,159	0/0:17,0:17:31.21:0,31,606	0/0:14,0:14:33.22:0,33,422	0/0:10,0:10:27.09:0,27,476	0/0:3,0:3:8.39:0,8,38	0/0:19,0:19:41.85:0,42,188	0/0:18,0:18:54.15:0,54,826	0/0:12,0:12:36.12:0,36,637	0/0:21,0:21:63.17:0,63,1006	0/0:12,0:12:36.09:0,36,556	0/0:6,0:6:18.06:0,18,309	1/1:3,6:9:24.07:541,24,0	1/1:3,6:10:18.04:413,18,0	0/0:12,0:12:36.12:0,36,635	0/0:12,0:12:36.12:0,36,614	0/0:21,0:21:60.15:0,60,992	0/0:10,0:11:7.51:0,8,375	0/0:15,0:15:39.13:0,39,688	0/0:13,0:13:36.12:0,36,637	0/0:17,0:17:45.12:0,45,741	0/0:12,0:12:32.90:0,33,543	0/0:17,0:17:48.14:0,48,793	0/0:19,0:19:50.74:0,51,811	0/0:21,0:21:63.16:0,63,1053	0/0:13,0:13:33.10:0,33,559	0/0:23,0:23:69.19:0,69,1134	0/0:10,0:10:20.55:0,21,370
chr10	80634365	.	T	TA	674.09	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=4.617;DP=210;FS=0.942;HRun=6;HaplotypeScore=26.4986;InbreedingCoeff=0.7219;MQ=68.88;MQ0=0;MQRankSum=-2.569;QD=23.24;ReadPosRankSum=1.203;VQSLOD=2.0483;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:9:24.08:302,24,0	0/0:1,0:1:3.01:0,3,31	0/0:3,0:3:6.01:0,6,61	0/1:5,0:4:0.01:0,0,0	0/0:10,0:10:24.05:0,24,245	0/0:2,0:2:6.01:0,6,61	0/0:4,0:4:9.02:0,9,92	0/0:20,0:20:42.07:0,42,423	0/0:7,0:7:18.03:0,18,179	0/0:10,0:10:18.03:0,18,180	0/0:7,0:7:12.03:0,12,122	0/0:6,0:6:15.02:0,15,146	1/1:1,8:9:24.08:302,24,0	1/1:1,5:6:18.02:208,18,0	0/0:4,0:4:12.03:0,12,122	0/0:5,0:5:9.02:0,9,92	0/0:16,0:16:39.09:0,39,398	0/0:7,0:7:12.03:0,12,122	0/0:7,0:7:18.04:0,18,189	0/0:8,0:8:24.05:0,24,245	0/0:6,0:6:18.04:0,18,183	0/0:3,0:3:3.01:0,3,31	0/0:8,0:8:18.04:0,18,184	0/0:9,0:9:17.98:0,18,165	0/0:11,0:11:30.07:0,30,306	0/0:5,0:5:12.03:0,12,122	0/0:10,0:10:30.07:0,30,306	0/0:12,0:12:36.08:0,36,367
chr10	80634408	.	C	CAAT	1269.65	PASS	AB=0.804;AC=24;AF=0.571;AN=42;BaseQRankSum=-2.868;DP=157;FS=9.058;HRun=0;HaplotypeScore=33.3185;InbreedingCoeff=0.3770;MQ=60.85;MQ0=1;MQRankSum=0.145;QD=12.21;ReadPosRankSum=-3.766;VQSLOD=0.7950;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:0.89:2,1,0	1/1:1,0:1:3.01:36,3,0	./.	./.	0/0:6,0:6:1.55:0,2,4	1/1:2,3:5:3.01:58,3,0	0/0:4,0:4:9.01:0,9,102	1/1:28,0:28:21.01:244,21,0	0/0:2,0:2:6.02:0,6,80	1/1:4,2:6:6.02:107,6,0	./.	0/0:2,0:2:3.01:0,3,40	0/0:4,0:5:1.82:0,2,5	0/0:3,0:5:4.22:0,4,24	./.	./.	0/1:6,11:17:15.74:381,0,16	1/1:3,4:7:1.11:55,1,0	1/1:7,0:9:8.99:87,9,0	1/1:5,0:5:3.01:40,3,0	1/1:0,2:2:6.02:116,6,0	./.	./.	0/0:3,0:3:3.01:0,3,40	1/1:3,5:8:12.04:231,12,0	0/1:2,0:5:9.76:10,0,15	1/1:3,0:5:3.01:39,3,0	0/0:0,0:14:38.69:0,39,272
chr10	80636204	.	TAC	T	1004.19	PASS	AC=26;AF=0.619;AN=42;BaseQRankSum=1.326;DP=230;FS=5.456;HRun=0;HaplotypeScore=53.7140;InbreedingCoeff=0.6598;MQ=49.85;MQ0=10;MQRankSum=-0.507;QD=7.85;ReadPosRankSum=-2.977;VQSLOD=2.1150;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,0:3:2.99:24,3,0	./.	0/0:18,0:3:5.88:0,6,37	1/1:11,0:11:2.99:24,3,0	0/0:7,0:7:8.99:0,9,74	0/0:8,0:8:11.95:0,12,94	1/1:13,13:26:41.60:347,42,0	0/0:6,0:6:11.97:0,12,96	1/1:5,0:5:9:82,9,0	1/1:4,0:4:5.99:49,6,0	0/0:7,0:7:11.99:0,12,100	./.	./.	./.	1/1:3,0:3:5.99:47,6,0	1/1:14,0:14:5.93:40,6,0	1/1:11,0:10:5.96:44,6,0	1/1:11,0:11:17.97:146,18,0	1/1:6,0:6:5.99:49,6,0	./.	0/0:6,0:6:3:0,3,25	0/0:4,0:4:8.99:0,9,75	0/0:1,0:1:3:0,3,25	./.	1/1:9,0:9:23.81:183,24,0	1/1:11,0:10:2.68:11,3,0	1/1:14,0:12:16.05:112,16,0
chr10	80636220	.	CACACACATATATATAT	C	1139.37	PASS	AB=1.000;AC=10;AF=0.238;AN=42;BaseQRankSum=6.491;DP=195;FS=4.894;HRun=0;HaplotypeScore=84.4001;InbreedingCoeff=0.0344;MQ=45.33;MQ0=9;MQRankSum=-5.567;QD=17.01;ReadPosRankSum=3.958;VQSLOD=1.2878;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:2,0:2:43.92:57,0,44	./.	0/0:12,0:2:6.02:0,6,114	0/1:10,0:10:39.92:59,0,40	0/0:8,0:8:9.03:0,9,244	0/0:7,0:7:12.04:0,12,298	0/0:25,0:23:57.21:0,57,462	0/0:6,0:6:18.06:0,18,704	0/1:5,0:5:72.53:134,0,73	0/0:6,0:6:5.98:0,6,48	0/0:6,0:6:12.04:0,12,299	./.	./.	./.	0/0:3,0:3:6.01:0,6,77	0/1:9,0:9:7.17:7,0,28	0/0:8,0:7:16.72:0,17,172	0/1:9,0:8:45.97:256,0,46	0/0:5,0:5:5.99:0,6,49	./.	0/0:2,0:2:3.01:0,3,75	0/0:4,0:4:12.03:0,12,250	0/0:1,0:1:3.01:0,3,74	./.	0/1:10,0:10:74.03:344,0,74	1/1:9,0:8:3.01:37,3,0	1/1:13,0:13:21.07:376,21,0
chr10	80636224	.	CACATATATATATAT	C	2786.05	PASS	AB=1.000;AC=25;AF=0.595;AN=42;BaseQRankSum=1.135;DP=188;FS=2.107;HRun=0;HaplotypeScore=72.6038;InbreedingCoeff=0.6536;MQ=45.58;MQ0=8;MQRankSum=-0.235;QD=24.44;ReadPosRankSum=1.751;VQSLOD=2.0557;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,1:2:3.01:129,3,0	./.	0/0:12,0:2:5.88:0,6,37	1/1:2,7:9:3.01:128,3,0	0/0:8,0:8:9:0,9,92	0/0:6,0:6:11.95:0,12,94	1/1:23,0:21:44.75:369,45,0	0/0:6,0:6:18.01:0,18,560	1/1:5,0:5:15.03:285,15,0	1/1:7,0:7:5.99:49,6,0	0/0:6,0:6:11.99:0,12,100	./.	./.	./.	1/1:4,0:4:5.68:48,6,0	1/1:9,0:9:8.84:73,9,0	0/1:7,0:6:0.06:36,0,0	1/1:1,1:8:24.04:461,24,0	1/1:4,0:5:5.99:49,6,0	./.	0/0:2,0:2:3:0,3,25	0/0:3,0:3:8.99:0,9,75	0/0:1,0:1:3:0,3,25	./.	1/1:0,10:11:30.02:710,30,0	1/1:1,0:8:3.01:59,3,0	1/1:4,1:14:21.07:545,21,0
chr10	80636226	.	CATATATATATAT	C	2041.86	PASS	AC=20;AF=0.833;AN=24;BaseQRankSum=2.959;DP=180;FS=10.212;HRun=0;HaplotypeScore=70.2485;InbreedingCoeff=0.3707;MQ=45.87;MQ0=7;MQRankSum=-2.166;QD=22.44;ReadPosRankSum=1.312;VQSLOD=1.0521;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,0:1:3.01:93,3,0	./.	./.	1/1:9,0:9:3.01:93,3,0	./.	./.	1/1:21,0:20:2.88:22,3,0	0/0:6,0:6:9.03:0,9,435	1/1:2,2:4:6.02:202,6,0	./.	./.	./.	./.	./.	1/1:4,0:4:2.67:26,3,0	1/1:7,2:9:2.90:34,3,0	0/0:7,0:6:2.37:0,2,8	1/1:9,0:8:15.05:423,15,0	./.	./.	./.	./.	./.	./.	1/1:11,0:11:18.05:499,18,0	1/1:8,0:8:3.01:82,3,0	1/1:12,1:14:21.07:661,21,0
chr10	80636344	.	TC	T	714.91	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=7.222;DP=210;FS=0.000;HRun=3;HaplotypeScore=26.8089;InbreedingCoeff=0.7438;MQ=68.22;MQ0=0;MQRankSum=0.242;QD=27.50;ReadPosRankSum=1.245;VQSLOD=2.5013;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:18.06:221,18,0	0/0:3,0:3:9.03:0,9,122	0/0:6,0:6:10.87:0,11,145	0/0:2,0:2:5.97:0,6,60	0/0:14,0:14:42.14:0,42,570	1/1:0,13:13:36.11:442,36,0	1/1:0,1:1:3.01:37,3,0	0/0:25,0:25:69.10:0,69,811	0/0:9,0:9:27.08:0,27,350	0/0:9,0:9:27.09:0,27,367	0/0:8,0:8:21.07:0,21,280	0/0:2,0:2:6.01:0,6,65	1/1:0,2:2:6.02:74,6,0	1/1:0,3:3:8.96:92,9,0	0/0:4,0:4:12.04:0,12,162	0/0:2,0:2:6.02:0,6,81	0/0:25,0:26:74.66:0,75,911	0/0:14,0:14:42.04:0,42,527	0/0:11,0:11:33.09:0,33,408	0/0:8,0:8:24.08:0,24,317	./.	0/0:1,0:1:3.01:0,3,40	0/0:1,0:1:3.01:0,3,41	./.	0/0:13,0:13:39.08:0,39,467	0/0:9,0:9:27.02:0,27,305	0/0:7,0:7:21.04:0,21,252	0/0:10,0:10:27.01:0,27,310
chr10	80636551	.	AT	A	473.78	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=5.831;DP=332;FS=6.124;HRun=7;HaplotypeScore=32.5735;InbreedingCoeff=0.8779;MQ=85.86;MQ0=0;MQRankSum=-0.074;QD=15.28;ReadPosRankSum=2.234;VQSLOD=2.3874;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:15.03:153,15,0	0/0:4,0:4:12.04:0,12,151	0/1:9,0:9:0.09:0,0,160	0/0:14,0:14:32.99:0,33,369	0/0:17,0:17:48.14:0,48,580	0/0:18,0:18:54.17:0,54,668	0/0:10,0:10:30.09:0,30,366	0/0:36,0:36:96.29:0,96,1185	0/0:9,0:9:18.05:0,18,216	0/0:12,0:12:33.11:0,33,415	0/0:10,0:10:30.09:0,30,365	0/0:4,0:4:12.04:0,12,151	1/1:0,10:10:27.06:275,27,0	1/1:1,6:7:18.04:184,18,0	0/0:7,0:7:21.07:0,21,264	0/0:10,0:10:27.08:0,27,329	0/0:10,0:10:24.08:0,24,302	0/0:12,0:12:36.12:0,36,453	0/0:21,0:21:60.17:0,60,721	0/0:13,0:13:36.12:0,36,453	0/0:13,0:13:36.12:0,36,453	0/0:10,0:10:30.10:0,30,377	0/0:9,0:9:27.09:0,27,340	0/0:11,0:11:30.10:0,30,377	0/0:10,0:10:30.03:0,30,358	0/0:15,0:15:45.13:0,45,554	0/0:18,0:18:54.16:0,54,665	0/0:8,0:8:24.08:0,24,302
chr10	80636967	.	A	ATCTC	807.05	PASS	AB=0.690;AC=4;AF=0.071;AN=56;BaseQRankSum=5.937;DP=474;FS=23.628;HRun=0;HaplotypeScore=88.7770;InbreedingCoeff=0.5326;MQ=60.52;MQ0=4;MQRankSum=-6.114;QD=24.46;ReadPosRankSum=1.008;VQSLOD=1.3687;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:3,3:6:2.57:75,0,3	0/0:1,0:1:3.01:0,3,46	0/0:19,0:9:17.25:0,17,374	0/0:17,0:12:19.58:0,20,224	0/0:24,0:24:66.11:0,66,1053	0/0:21,0:20:57.20:0,57,1044	0/0:6,0:6:18.05:0,18,309	0/0:38,0:38:99:0,111,1807	0/0:14,0:14:42.13:0,42,755	0/0:25,0:25:75.22:0,75,1349	0/0:17,0:17:48.12:0,48,815	0/0:4,0:4:12.04:0,12,228	1/1:8,8:17:20.95:641,21,0	0/1:6,4:10:14.28:205,0,14	0/0:19,0:19:54.13:0,54,925	0/0:13,0:13:36.11:0,36,676	0/0:18,0:17:39.07:0,39,631	0/0:27,0:27:75.06:0,75,1299	0/0:27,0:22:63.18:0,63,1099	0/0:22,0:22:57.20:0,57,1075	0/0:13,0:13:36.05:0,36,551	0/0:11,0:11:33.08:0,33,559	0/0:9,0:9:27.09:0,27,502	0/0:9,0:8:21:0,21,398	0/0:18,0:18:48.15:0,48,870	0/0:19,0:19:51.17:0,51,962	0/0:29,0:29:81.26:0,81,1484	0/0:20,0:20:54.18:0,54,971
chr10	80636976	.	T	TC	279.55	PASS	AB=0.857;AC=4;AF=0.071;AN=56;BaseQRankSum=3.856;DP=482;FS=6.205;HRun=0;HaplotypeScore=64.5775;InbreedingCoeff=0.3801;MQ=58.98;MQ0=4;MQRankSum=-4.246;QD=5.95;ReadPosRankSum=-3.769;VQSLOD=1.7880;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,1:6:3.73:0,4,12	0/0:2,0:2:5.99:0,6,64	0/0:21,0:9:23.82:0,24,282	0/0:20,1:13:22.25:0,22,222	0/0:22,0:22:60.66:0,61,823	0/0:20,0:19:57.19:0,57,794	0/0:6,0:6:15.05:0,15,210	0/0:41,1:42:99:0,123,1703	0/0:16,0:16:45.15:0,45,629	0/0:27,0:27:81.26:0,81,1107	0/0:15,0:15:45.15:0,45,629	0/0:6,0:6:15.05:0,15,210	0/1:12,0:15:51.51:112,0,52	1/1:6,0:10:12.41:254,12,0	0/0:18,0:18:54.07:0,54,729	0/0:13,1:14:39.12:0,39,531	0/0:18,1:17:45.08:0,45,587	0/0:27,0:27:75.05:0,75,980	0/0:26,0:21:63.20:0,63,865	0/0:22,0:22:63.19:0,63,851	0/0:9,0:9:27.09:0,27,378	0/0:11,0:11:30.10:0,30,419	0/0:11,0:11:33.11:0,33,461	0/0:10,0:9:23.90:0,24,314	0/0:19,0:19:57.19:0,57,796	0/0:18,0:18:54.18:0,54,755	0/0:27,0:27:81.27:0,81,1133	0/1:19,3:22:24.66:25,0,734
chr10	80636991	.	T	TTATA	886.08	PASS	AB=0.834;AC=6;AF=0.107;AN=56;BaseQRankSum=6.470;DP=478;FS=23.557;HRun=0;HaplotypeScore=88.4107;InbreedingCoeff=0.2368;MQ=57.25;MQ0=4;MQRankSum=-5.704;QD=11.36;ReadPosRankSum=-0.732;VQSLOD=1.2040;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,3:8:11.85:289,12,0	0/0:2,0:2:3.01:0,3,57	0/1:21,0:5:14.45:14,0,102	0/1:21,0:11:9.58:10,0,76	0/0:23,0:23:63.20:0,63,1154	0/0:18,0:16:45.14:0,45,777	0/0:6,0:5:9.03:0,9,163	0/0:43,0:42:99:0,117,2055	0/0:16,0:16:45.14:0,45,788	0/0:27,0:27:75.23:0,75,1312	0/0:17,0:17:48.11:0,48,756	0/0:7,0:7:18.06:0,18,324	0/1:8,7:16:9.79:584,0,10	0/1:6,2:9:96.72:112,0,97	0/0:18,0:17:51.05:0,51,860	0/0:11,0:11:30.07:0,30,505	0/0:22,0:20:51.02:0,51,801	0/0:26,0:26:75.16:0,75,1297	0/0:23,0:19:57.16:0,57,972	0/0:19,0:19:57.18:0,57,1033	0/0:9,0:9:27.09:0,27,512	0/0:7,0:7:18.05:0,18,310	0/0:11,0:11:27.08:0,27,481	0/0:12,0:11:24.01:0,24,439	0/0:17,0:17:51.16:0,51,935	0/0:20,0:20:57.18:0,57,1026	0/0:23,0:23:66.18:0,66,1136	0/0:22,0:23:65.80:0,66,1188
chr10	80637014	.	T	TTATC	486.18	PASS	AB=0.876;AC=6;AF=0.107;AN=56;BaseQRankSum=6.780;DP=448;FS=3.744;HRun=0;HaplotypeScore=85.9821;InbreedingCoeff=0.4800;MQ=55.04;MQ0=6;MQRankSum=-6.364;QD=8.84;ReadPosRankSum=-1.287;VQSLOD=2.3046;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,2:10:11.40:200,11,0	0/0:6,0:6:18.06:0,18,286	0/0:16,0:3:2.98:0,3,51	0/0:11,0:5:0.80:0,1,2	0/0:23,0:23:60.21:0,60,1017	0/1:14,0:13:1.08:1,0,16	0/1:4,0:4:0:0,0,0	0/0:34,0:32:54.16:0,54,835	0/0:16,0:16:48.16:0,48,791	0/0:21,0:20:57.20:0,57,967	0/0:15,0:15:42.10:0,42,672	0/0:10,0:10:27.09:0,27,458	0/1:12,3:15:0.66:346,0,1	0/1:8,1:9:41.49:48,0,41	0/0:19,0:18:45.15:0,45,734	0/0:12,0:12:30.09:0,30,475	0/0:25,0:24:63.11:0,63,971	0/0:23,0:24:10.11:0,10,916	0/0:18,0:16:33.11:0,33,560	0/0:19,0:19:45.15:0,45,744	0/0:12,0:12:30.10:0,30,498	0/0:6,0:6:12.04:0,12,194	0/0:14,0:14:24.08:0,24,397	0/0:16,0:15:30.03:0,30,509	0/0:17,0:17:44.92:0,45,719	0/0:19,0:19:45.14:0,45,719	0/0:19,0:19:39.13:0,39,662	0/0:20,0:20:54.18:0,54,916
chr10	80637029	.	T	TC	202.58	PASS	AB=0.710;AC=6;AF=0.107;AN=56;BaseQRankSum=6.941;DP=457;FS=0.885;HRun=0;HaplotypeScore=61.8846;InbreedingCoeff=0.4811;MQ=53.24;MQ0=8;MQRankSum=-5.890;QD=4.71;ReadPosRankSum=-2.789;VQSLOD=2.7686;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,2:10:5.42:58,5,0	0/0:6,0:6:18.06:0,18,252	0/0:8,0:1:3.01:0,3,42	0/0:4,0:2:0.89:0,1,2	0/0:25,0:25:69.23:0,69,965	0/1:5,8:11:99:228,0,176	0/0:5,2:6:12:0,12,146	0/0:35,0:32:43.54:0,44,1136	0/0:17,0:17:51.16:0,51,699	0/0:26,0:25:75.25:0,75,1037	0/0:18,0:18:54.18:0,54,754	0/0:13,0:13:36.12:0,36,504	1/1:9,2:11:4.69:24,5,0	0/1:6,1:8:4.02:4,0,34	0/0:20,1:20:60.20:0,60,838	0/0:15,0:15:39.08:0,39,495	0/0:29,1:30:81.10:0,81,1045	0/0:23,1:24:40.10:0,40,875	0/0:16,0:14:42.14:0,42,588	0/0:22,0:22:66.22:0,66,922	0/0:14,0:14:42.14:0,42,587	0/0:5,0:4:12.04:0,12,167	0/0:13,0:13:39.13:0,39,545	0/0:15,1:15:36.12:0,36,504	0/0:22,1:23:40.43:0,40,877	0/0:19,0:19:57.18:0,57,780	0/0:18,0:18:54.17:0,54,740	0/0:19,0:19:57.19:0,57,797
chr10	80637052	.	T	TC	155.15	PASS	AB=0.815;AC=4;AF=0.077;AN=52;BaseQRankSum=5.724;DP=467;FS=0.000;HRun=0;HaplotypeScore=63.7446;InbreedingCoeff=0.3306;MQ=52.34;MQ0=13;MQRankSum=-5.500;QD=5.17;ReadPosRankSum=-1.648;VQSLOD=2.6623;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,3:12:64.93:97,0,65	0/0:8,0:8:24.08:0,24,336	./.	./.	0/0:30,0:29:84.28:0,84,1175	0/0:9,0:10:13.27:0,13,282	0/0:7,0:6:14.98:0,15,186	0/0:39,1:30:39.35:0,39,1102	0/0:15,0:15:45.14:0,45,612	0/0:25,1:25:75.22:0,75,1001	0/0:21,1:22:15.39:0,15,774	0/0:13,0:13:39.13:0,39,545	0/1:7,2:9:60.07:60,0,88	1/1:7,1:8:8.74:104,9,0	0/0:22,0:21:60.20:0,60,839	0/0:15,1:16:0.35:0,0,566	0/0:32,0:32:87.12:0,87,1140	0/0:21,0:21:31.61:0,32,631	0/0:22,0:16:48.16:0,48,671	0/0:20,0:20:60.19:0,60,824	0/0:14,0:14:42.14:0,42,587	0/0:5,0:4:12.04:0,12,168	0/0:14,0:14:42.14:0,42,586	0/0:12,0:11:27.05:0,27,356	0/0:22,0:22:24.47:0,24,839	0/0:16,0:16:48.16:0,48,671	0/0:18,0:18:54.18:0,54,755	0/0:24,0:23:69.21:0,69,946
chr10	80637087	.	CTAT	C	124.09	PASS	AB=0.752;AC=3;AF=0.054;AN=56;BaseQRankSum=5.914;DP=501;FS=2.522;HRun=0;HaplotypeScore=77.4282;InbreedingCoeff=-0.0550;MQ=56.15;MQ0=3;MQRankSum=-5.740;QD=4.43;ReadPosRankSum=-1.674;VQSLOD=1.7103;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,3:11:80.25:130,0,80	0/0:9,0:9:27.09:0,27,525	0/0:15,0:8:20.81:0,21,361	0/0:3,0:3:9.03:0,9,172	0/0:36,0:35:99:0,105,2196	0/0:18,0:18:10.72:0,11,829	0/0:7,0:7:11.90:0,12,216	0/0:38,0:35:99:0,105,1839	0/0:11,0:11:27.09:0,27,574	0/0:25,0:25:75.26:0,75,1494	0/0:28,0:28:72.25:0,72,1498	0/0:12,0:12:33.11:0,33,689	0/1:7,2:9:15.06:36,0,15	0/1:3,4:7:46.01:58,0,46	0/0:18,0:17:51.17:0,51,1083	0/0:19,0:19:57.19:0,57,1132	0/0:32,0:32:0.62:0,1,1080	0/0:21,0:21:47.62:0,48,1017	0/0:14,0:14:39.13:0,39,806	0/0:31,0:31:90.31:0,90,1932	0/0:16,0:16:48.16:0,48,975	0/0:6,0:6:18.06:0,18,356	0/0:20,0:20:60.20:0,60,1173	0/0:15,0:14:33.11:0,33,614	0/0:26,0:26:75.26:0,75,1544	0/0:15,0:15:39.13:0,39,806	0/0:19,0:19:57.19:0,57,1135	0/0:19,0:19:54.18:0,54,1103
chr10	80637090	.	T	TTATC	725.88	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.887;DP=496;FS=32.073;HRun=0;HaplotypeScore=83.7140;InbreedingCoeff=0.8826;MQ=56.40;MQ0=3;MQRankSum=-7.289;QD=26.88;ReadPosRankSum=-1.347;VQSLOD=1.5733;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,6:10:21:369,21,0	0/0:9,0:9:18.04:0,18,255	0/0:15,0:8:21.27:0,21,293	0/0:3,0:3:9.01:0,9,125	0/0:36,0:36:93.30:0,93,1503	0/0:18,0:18:24.62:0,25,614	0/0:7,0:8:3.01:0,3,50	0/0:41,0:38:81.15:0,81,1044	0/0:9,0:9:21.06:0,21,329	0/0:26,0:26:63.18:0,63,937	0/0:26,0:26:60.20:0,60,985	0/0:11,0:11:24.06:0,24,355	1/1:3,3:7:8.96:136,9,0	1/1:4,3:10:17.99:356,18,0	0/0:17,0:17:42.12:0,42,634	0/0:19,0:19:42.14:0,42,678	0/0:28,0:29:33.56:0,34,743	0/0:21,0:21:19.85:0,20,471	0/0:14,0:14:36.11:0,36,557	0/0:31,0:31:90.27:0,90,1415	0/0:16,0:16:42.13:0,42,656	0/0:6,0:6:15.05:0,15,252	0/0:21,0:21:57.12:0,57,830	0/0:15,0:14:24.05:0,24,374	0/0:25,0:25:69.24:0,69,1156	0/0:14,0:14:33.10:0,33,500	0/0:20,0:20:51.17:0,51,833	0/0:19,0:19:45.11:0,45,678
chr10	80637248	.	CCACCCTAGCATTCCTCTA	C	2657.91	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.014;DP=561;FS=0.000;HRun=0;HaplotypeScore=248.2738;InbreedingCoeff=0.9665;MQ=57.35;MQ0=6;MQRankSum=-6.650;QD=63.28;ReadPosRankSum=2.134;VQSLOD=3.0470;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.28:0,81,6184	0/0:5,0:5:9.03:0,9,608	0/0:26,0:16:45.15:0,45,2326	0/0:20,0:11:33.11:0,33,1985	0/0:24,0:24:69.24:0,69,4956	1/1:1,14:15:21.07:1082,21,0	1/1:6,21:27:33.11:1696,33,0	0/0:26,0:26:72.71:0,73,5066	0/0:14,0:14:42.13:0,42,3157	0/0:17,0:16:48.16:0,48,3720	0/0:15,0:15:39.61:0,40,2927	0/0:13,0:13:39.13:0,39,3267	0/0:18,0:18:51.18:0,51,3881	0/0:25,0:25:66.23:0,66,5137	0/0:17,0:17:48.16:0,48,3742	0/0:15,0:15:42.14:0,42,3457	0/0:23,0:23:69.24:0,69,5849	0/0:16,0:16:45.15:0,45,3250	0/0:22,0:21:63.22:0,63,4355	0/0:22,0:22:63.21:0,63,4154	0/0:52,0:52:99:0,157,12268	0/0:9,0:9:24.08:0,24,1703	0/0:12,0:12:33.11:0,33,2441	0/0:35,0:35:93.27:0,93,6953	0/0:24,0:24:66.20:0,66,4970	0/0:10,0:10:30.10:0,30,2492	0/0:18,0:18:54.19:0,54,4122	0/0:10,0:10:27.09:0,27,2038
chr10	80640327	.	T	TG	3497.76	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.146;DP=593;FS=0.453;HRun=0;HaplotypeScore=66.7546;InbreedingCoeff=0.9975;MQ=74.47;MQ0=0;MQRankSum=-1.333;QD=42.14;ReadPosRankSum=2.003;VQSLOD=4.3178;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:96.33:1534,96,0	0/0:8,0:8:21.07:0,21,294	0/0:10,0:10:23.88:0,24,253	0/0:13,0:13:28.55:0,29,366	0/0:29,0:29:87.25:0,87,1195	0/0:21,0:21:63.21:0,63,881	0/0:17,0:17:51.17:0,51,713	0/0:34,0:34:99:0,99,1383	0/0:14,0:14:42.11:0,42,554	0/0:31,0:31:93.29:0,93,1259	0/0:26,0:26:75.25:0,75,1047	0/0:16,0:16:45.15:0,45,630	1/1:0,23:23:60.20:959,60,0	1/1:1,23:24:63.21:1005,63,0	0/0:17,0:17:51.16:0,51,694	0/0:19,0:19:57.19:0,57,797	0/0:29,0:29:78.26:0,78,1091	0/0:26,0:26:75.25:0,75,1040	0/0:24,0:24:72.24:0,72,1001	0/0:25,0:25:72.23:0,72,990	0/0:14,0:14:36.12:0,36,500	0/0:22,0:22:63.17:0,63,853	0/0:17,0:17:51.16:0,51,696	0/0:17,0:17:51.17:0,51,708	0/0:25,0:25:72.24:0,72,1007	0/0:19,0:19:57.19:0,57,797	0/0:20,0:20:57.19:0,57,797	0/0:17,0:17:48.16:0,48,677
chr10	80640404	.	C	CTG	6451.16	PASS	AB=0.689;AC=28;AF=0.500;AN=56;BaseQRankSum=-9.637;DP=600;FS=1.440;HRun=0;HaplotypeScore=104.6111;InbreedingCoeff=0.3943;MQ=58.20;MQ0=17;MQRankSum=4.906;QD=17.25;ReadPosRankSum=-2.291;VQSLOD=4.1103;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:14.44:0,14,137	0/1:2,5:8:26.92:72,0,27	0/0:28,0:8:5.24:0,5,38	0/0:36,0:11:3.44:0,3,21	0/1:6,10:17:15.27:270,0,15	1/1:17,0:17:16.55:199,17,0	0/1:18,0:18:65.37:182,0,65	1/1:10,22:30:65.89:757,66,0	0/0:11,0:15:32.85:0,33,345	1/1:8,13:21:41.21:488,41,0	0/1:6,10:18:2.83:225,0,3	0/0:22,0:22:47.95:0,48,542	0/0:24,0:24:38.43:0,38,308	0/0:23,0:23:16.77:0,17,129	1/1:2,6:8:11.07:152,11,0	1/1:3,5:7:6.02:97,6,0	0/1:8,21:30:30.67:518,0,31	1/1:7,26:33:60.16:924,60,0	1/1:11,13:20:12.50:469,13,0	1/1:5,16:20:12.04:195,12,0	0/1:16,32:46:62.84:538,0,63	0/0:13,0:13:26.71:0,27,300	0/0:17,0:17:36.08:0,36,413	0/0:25,0:25:71.91:0,72,775	1/1:5,14:17:12.04:195,12,0	1/1:9,22:31:57.31:878,57,0	0/1:2,7:9:11.12:43,0,11	0/1:10,0:10:7.77:250,0,8
chr10	80640427	.	CGCGTGT	C	1144.97	PASS	AB=0.969;AC=8;AF=0.143;AN=56;BaseQRankSum=2.101;DP=529;FS=6.099;HRun=0;HaplotypeScore=142.0328;InbreedingCoeff=0.6945;MQ=59.43;MQ0=11;MQRankSum=-4.806;QD=13.79;ReadPosRankSum=-0.456;VQSLOD=2.0765;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,7:20:20.79:279,21,0	0/0:8,0:8:15.01:0,15,293	0/1:7,0:3:5.83:6,0,69	0/1:14,0:5:31.89:32,0,134	0/0:18,0:18:35.28:0,35,1107	0/0:22,0:22:63.06:0,63,1070	0/0:27,0:27:38.47:0,38,945	0/0:22,0:22:59.93:0,60,974	0/0:16,0:16:39.11:0,39,1052	0/0:20,0:20:60.14:0,60,1699	0/0:16,0:16:27.06:0,27,808	0/0:20,0:20:57.01:0,57,1239	1/1:1,23:24:36.12:756,36,0	1/1:0,17:17:11.40:220,11,0	0/0:13,0:13:29.31:0,29,786	0/0:6,0:5:9.03:0,9,279	0/0:23,0:23:54.16:0,54,1577	0/0:32,0:32:75.26:0,75,2394	0/0:26,0:23:69.07:0,69,1573	0/0:17,0:17:21.07:0,21,638	0/0:45,0:44:75.26:0,75,2244	0/0:11,0:11:30.02:0,30,706	0/0:18,0:18:54.09:0,54,1152	0/0:26,0:26:61.90:0,62,2001	0/0:19,0:17:30.10:0,30,852	0/0:22,0:22:14.98:0,15,1363	0/0:10,0:10:17.78:0,18,465	0/0:9,0:8:20.88:0,21,210
chr10	80640429	.	CGT	C	727.67	PASS	AB=0.986;AC=13;AF=0.232;AN=56;BaseQRankSum=2.156;DP=526;FS=0.555;HRun=0;HaplotypeScore=108.4784;InbreedingCoeff=0.5684;MQ=59.40;MQ0=12;MQRankSum=0.712;QD=4.73;ReadPosRankSum=-1.337;VQSLOD=2.7940;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:20:8.63:48,9,0	0/0:9,0:9:12:0,12,122	0/1:8,0:3:8.82:9,0,49	0/1:15,0:6:6.90:7,0,34	0/0:18,0:18:13.24:0,13,464	1/1:20,2:22:6.01:228,6,0	1/1:25,2:27:33.82:422,34,0	0/0:21,0:21:38.74:0,39,360	0/0:16,0:16:32.29:0,32,441	0/0:21,0:21:59.12:0,59,766	0/0:14,0:14:24.07:0,24,354	0/0:21,0:21:33.06:0,33,474	1/1:23,0:23:7.50:99,7,0	1/1:17,0:17:8.79:52,9,0	0/0:13,0:13:27.94:0,28,354	0/0:6,0:5:9.03:0,9,142	0/0:24,1:25:21.19:0,21,706	0/0:34,0:34:57.38:0,57,1076	0/0:27,0:24:52.52:0,53,669	0/0:15,0:15:21.04:0,21,282	0/0:44,0:43:21.18:0,21,964	0/0:11,0:11:11.22:0,11,236	0/0:17,1:18:2.26:0,2,416	0/0:23,0:23:54.18:0,54,850	0/0:19,0:17:30.07:0,30,393	0/1:21,1:22:27.12:27,0,486	0/0:10,0:10:16.28:0,16,200	0/0:7,0:6:3.01:0,3,39
chr10	80641909	.	TTAGGTGGATCTTTTCCCACTAATGCC	T	7157.42	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.660;DP=526;FS=0.000;HRun=0;HaplotypeScore=334.3572;InbreedingCoeff=0.9976;MQ=64.27;MQ0=1;MQRankSum=-9.573;QD=166.45;ReadPosRankSum=3.964;VQSLOD=3.9202;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:45.15:3043,45,0	0/0:7,0:7:21.07:0,21,2239	0/0:19,0:16:47.94:0,48,2538	0/0:19,0:19:57.19:0,57,4114	0/0:26,0:26:78.25:0,78,8099	0/0:13,0:13:39.13:0,39,3774	0/0:18,0:18:54.19:0,54,5295	0/0:24,0:24:72.25:0,72,5972	0/0:25,0:25:75.26:0,75,8363	0/0:25,0:25:75.26:0,75,7867	0/0:15,0:15:45.15:0,45,5118	0/0:21,0:21:63.21:0,63,6803	1/1:1,11:12:33.11:2382,33,0	1/1:0,10:10:24.08:1732,24,0	0/0:24,0:24:72.23:0,72,7852	0/0:17,0:17:51.18:0,51,6176	0/0:26,0:26:78.24:0,78,7661	0/0:15,0:15:42.14:0,42,4282	0/0:18,0:18:54.19:0,54,4923	0/0:18,0:18:54.19:0,54,6173	0/0:36,0:36:99:0,108,11592	0/0:11,0:11:33.11:0,33,3730	0/0:16,0:16:48.16:0,48,5370	0/0:19,0:19:51.18:0,51,6083	0/0:16,0:16:48.16:0,48,5081	0/0:18,0:18:54.19:0,54,5655	0/0:24,0:24:72.25:0,72,8517	0/0:13,0:13:39.13:0,39,4476
chr10	80645479	.	GT	G	10976.01	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=7.549;DP=590;FS=9.976;HRun=9;HaplotypeScore=59.4329;InbreedingCoeff=0.9927;MQ=57.57;MQ0=6;MQRankSum=3.463;QD=23.45;ReadPosRankSum=3.147;VQSLOD=5.4403;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:54.02:494,54,0	1/1:1,8:9:24.01:220,24,0	0/0:21,0:11:30.09:0,30,346	0/0:17,0:10:30.09:0,30,341	1/1:4,33:37:90.03:823,90,0	1/1:5,30:35:87.04:796,87,0	1/1:2,8:10:21.01:192,21,0	1/1:5,24:29:68.98:623,69,0	0/0:14,0:14:36.09:0,36,405	1/1:0,22:22:66.04:604,66,0	1/1:1,21:22:54.02:494,54,0	0/0:6,0:6:12.04:0,12,138	1/1:2,22:24:63.03:577,63,0	1/1:0,14:14:42.02:384,42,0	1/1:1,18:19:51.02:467,51,0	1/1:1,15:16:45.02:412,45,0	1/1:2,30:33:84.52:770,85,0	1/1:3,21:24:60.03:549,60,0	1/1:3,18:21:54.02:494,54,0	1/1:1,31:32:87.04:796,87,0	1/1:1,19:20:57.03:522,57,0	0/0:23,0:23:60.17:0,60,683	0/0:21,0:21:57.15:0,57,639	0/0:18,0:18:45.13:0,45,519	1/1:2,20:22:54.03:494,54,0	1/1:2,12:14:36.01:330,36,0	1/1:3,28:31:78.04:714,78,0	1/1:2,8:10:24.46:220,24,0
chr10	80646722	.	A	ATG	438.63	PASS	AC=20;AF=0.500;AN=40;BaseQRankSum=-0.129;DP=231;FS=10.369;HRun=0;HaplotypeScore=39.3006;InbreedingCoeff=0.6952;MQ=73.89;MQ0=15;MQRankSum=-2.192;QD=18.28;ReadPosRankSum=-4.990;VQSLOD=0.8967;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:24,0:13:37.92:0,38,523	0/0:20,0:13:32.89:0,33,450	1/1:1,0:1:3.01:52,3,0	0/0:31,0:30:87.30:0,87,1393	0/0:28,0:26:75.22:0,75,1172	1/1:5,0:5:9.02:126,9,0	0/0:21,0:20:57.19:0,57,925	./.	1/1:0,1:2:3.01:33,3,0	0/0:17,0:16:45.07:0,45,664	1/1:3,0:3:3.01:52,3,0	1/1:2,0:2:3.01:32,3,0	./.	./.	./.	0/0:4,0:4:7.65:0,8,43	./.	1/1:0,4:4:3.01:46,3,0	1/1:1,0:1:2.97:20,3,0	0/0:18,0:17:51.17:0,51,823	0/0:22,0:20:60.18:0,60,918	0/0:18,0:17:51.17:0,51,830	1/1:2,0:2:6.02:83,6,0	1/1:3,0:2:6.02:92,6,0	1/1:1,0:1:3.01:52,3,0	./.
chr10	80647271	.	T	TG	111.30	PASS	AC=4;AF=0.40;AN=10;BaseQRankSum=2.520;DP=50;FS=0.000;HRun=0;HaplotypeScore=7.6277;MQ=22.28;MQ0=34;MQRankSum=-0.678;QD=18.55;ReadPosRankSum=-0.597;VQSLOD=4.4213;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	1/1:0,3:3:6.02:94,6,0	1/1:1,2:2:6.02:95,6,0	./.	0/0:6,0:6:15.05:0,15,209	./.	./.	0/0:2,0:1:3.01:0,3,42	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/0:2,0:1:3.01:0,3,42	./.	./.	./.	./.
chr10	80647349	.	TA	T	124.64	PASS	AC=4;AF=0.143;AN=28;BaseQRankSum=1.311;DP=81;FS=0.000;HRun=9;HaplotypeScore=22.2427;InbreedingCoeff=0.4939;MQ=81.66;MQ0=9;MQRankSum=-0.635;QD=12.46;ReadPosRankSum=2.231;VQSLOD=1.3430;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:0,0:1:2.92:0,3,17	./.	0/0:16,0:10:1.95:0,2,191	0/0:13,0:5:6.02:0,6,67	./.	1/1:0,6:6:18.01:165,18,0	1/1:2,2:2:6:55,6,0	./.	0/0:8,0:8:18.05:0,18,208	0/0:1,0:1:1.25:0,1,3	./.	0/0:3,0:3:9.03:0,9,104	./.	./.	./.	./.	./.	0/0:1,0:1:2.50:0,2,9	./.	0/0:1,0:1:0.47:0,0,1	./.	0/0:3,0:3:6.02:0,6,69	0/0:12,0:12:27.08:0,27,312	0/0:4,0:4:11.99:0,12,123	0/0:2,0:2:2.04:0,2,6	./.	./.	./.
chr10	80648133	.	C	CTTTGT	1456.62	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=2.872;DP=561;FS=6.223;HRun=0;HaplotypeScore=112.1753;InbreedingCoeff=0.7501;MQ=76.72;MQ0=0;MQRankSum=-6.736;QD=18.21;ReadPosRankSum=-4.025;VQSLOD=2.0986;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:8,9:20:3.06:213,3,0	0/0:5,0:5:12.04:0,12,224	0/0:25,0:24:22.53:0,23,265	0/1:24,0:15:9.50:10,0,59	0/0:42,0:42:93.29:0,93,1636	0/0:19,0:19:30.10:0,30,545	0/0:12,0:12:9.02:0,9,137	0/0:26,0:26:30.09:0,30,499	0/0:16,0:16:33.11:0,33,616	0/0:29,0:29:47.29:0,47,863	0/0:26,0:26:57.19:0,57,1065	0/0:17,0:17:45.15:0,45,840	1/1:6,12:18:12.04:342,12,0	1/1:5,12:18:36.12:1026,36,0	0/0:15,0:15:39.12:0,39,698	0/0:16,0:16:27.09:0,27,505	0/0:12,0:12:27.09:0,27,477	0/0:13,0:13:36.04:0,36,572	0/0:32,0:32:39.10:0,39,634	0/0:18,0:18:36.12:0,36,673	0/0:20,0:20:42.14:0,42,769	0/0:16,0:16:36.11:0,36,630	0/0:16,0:16:36.11:0,36,633	0/0:22,0:22:36.11:0,36,638	0/0:20,0:20:45.11:0,45,793	0/0:33,0:33:84.29:0,84,1551	0/0:16,0:16:39.13:0,39,725	0/0:15,0:15:42.14:0,42,785
chr10	80648538	.	T	TC	2428.35	PASS	AB=0.787;AC=34;AF=0.607;AN=56;BaseQRankSum=-4.761;DP=399;FS=0.529;HRun=10;HaplotypeScore=58.1532;InbreedingCoeff=0.4845;MQ=63.36;MQ0=3;MQRankSum=0.306;QD=9.03;ReadPosRankSum=-3.396;VQSLOD=1.3893;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,12:22:15.05:175,15,0	1/1:8,0:8:17.95:152,18,0	0/0:17,0:8:11.19:0,11,76	0/0:17,0:15:25.22:0,25,187	1/1:11,2:13:17.53:155,18,0	0/0:3,0:13:19.87:0,20,57	0/0:8,0:27:30.54:0,31,88	0/1:12,6:18:9.61:113,0,10	0/0:20,1:22:20.93:0,21,362	1/1:1,5:6:15.01:148,15,0	1/1:9,1:10:11.93:102,12,0	0/0:12,0:13:25.95:0,26,200	1/1:3,6:9:12.03:128,12,0	1/1:1,11:13:2.15:51,2,0	1/1:3,8:11:21.04:217,21,0	1/1:3,0:3:9:83,9,0	1/1:5,17:22:26.14:306,26,0	1/1:4,7:14:7.08:141,7,0	0/1:10,2:11:10.29:77,0,10	0/1:8,1:9:9.04:65,0,9	1/1:11,17:28:21.49:213,21,0	0/0:9,0:9:11.93:0,12,96	0/0:9,0:10:22.91:0,23,170	0/1:17,2:22:27.96:28,0,179	1/1:7,7:13:5.59:148,6,0	0/1:6,4:10:48.57:49,0,59	1/1:4,13:17:24.06:252,24,0	0/1:2,5:7:18.63:26,0,19
chr10	80649639	.	C	CTTTT	11491.91	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-7.072;DP=521;FS=1.225;HRun=10;HaplotypeScore=88.1767;InbreedingCoeff=0.9718;MQ=74.02;MQ0=0;MQRankSum=-5.398;QD=38.43;ReadPosRankSum=-4.963;VQSLOD=2.9677;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:20:55.36:0,55,728	1/1:1,10:12:20.94:462,21,0	0/0:16,0:15:29.92:0,30,355	0/0:15,0:16:4.36:0,4,257	1/1:6,11:20:42.07:794,42,0	0/0:28,0:29:78.12:0,78,1045	0/0:17,0:17:45.12:0,45,637	1/1:9,8:19:42.14:915,42,0	0/0:18,0:18:42.09:0,42,594	1/1:10,11:26:42.01:799,42,0	1/1:4,11:18:42.10:896,42,0	0/0:13,0:14:39.10:0,39,533	0/0:11,0:11:23.98:0,24,317	0/0:23,0:24:63.11:0,63,872	1/1:10,14:25:43.96:943,44,0	1/1:3,8:14:18.06:399,18,0	1/1:6,9:18:28.34:572,28,0	1/1:1,4:7:18.06:377,18,0	1/1:6,4:12:21.07:465,21,0	1/1:11,19:31:63.17:1312,63,0	1/1:4,4:9:12.04:250,12,0	0/0:21,0:21:54.12:0,54,745	0/0:23,0:23:60.13:0,60,830	0/0:11,0:13:36.07:0,36,472	1/1:8,15:23:39.13:918,39,0	1/1:11,14:32:69.22:1334,69,0	1/1:8,12:21:29.28:560,29,0	1/1:1,8:11:24.08:497,24,0
chr10	80650829	.	ATCTCTCTCTCTCTCTCTCTC	A	3127.40	PASS	AC=30;AF=0.750;AN=40;BaseQRankSum=4.515;DP=486;FS=13.455;HRun=0;HaplotypeScore=212.8135;InbreedingCoeff=0.4895;MQ=64.74;MQ0=26;MQRankSum=-1.846;QD=11.98;ReadPosRankSum=2.536;VQSLOD=1.6591;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,3:19:3.01:58,3,0	1/1:9,0:10:2.32:153,2,0	./.	./.	./.	1/1:10,0:11:3.95:101,4,0	./.	1/1:27,0:25:0.47:1,0,0	0/0:11,0:11:0.47:0,0,1	1/1:16,6:22:18.02:535,18,0	./.	0/0:17,0:16:5.59:0,6,283	1/1:14,0:14:3.01:56,3,0	1/1:12,0:16:3.01:147,3,0	1/1:14,0:16:3.01:154,3,0	1/1:25,0:24:9.03:398,9,0	1/1:13,1:14:6.02:284,6,0	./.	1/1:16,2:18:6.02:272,6,0	./.	1/1:23,0:21:11.99:147,12,0	0/0:22,0:22:6.02:0,6,513	0/0:23,0:23:3.01:0,3,48	0/0:29,0:26:21.96:0,22,1110	1/1:4,2:6:0.47:1,0,0	1/1:16,6:20:18.03:619,18,0	1/1:9,5:14:9.03:325,9,0	./.
chr10	80650863	.	CTCTCTCTCTCTCTCTCTCTCTCTCTG	C	2907.54	PASS	AB=0.975;AC=21;AF=0.404;AN=52;BaseQRankSum=5.383;DP=499;FS=5.008;HRun=0;HaplotypeScore=208.4059;InbreedingCoeff=-0.3965;MQ=40.24;MQ0=58;MQRankSum=1.909;QD=7.94;ReadPosRankSum=1.071;VQSLOD=2.4706;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:18:97.96:98,0,171	1/1:11,0:9:5.95:121,6,0	./.	./.	0/0:27,0:23:10.37:0,10,129	0/1:24,0:22:80.93:101,0,81	0/0:18,0:16:11.92:0,12,131	0/0:14,0:11:10.21:0,10,118	0/1:15,0:15:8.90:9,0,62	0/1:26,0:22:99:370,0,319	0/1:25,0:23:12.84:40,0,13	0/1:13,0:12:7.27:7,0,708	0/1:12,0:11:96.97:97,0,130	1/1:12,0:12:2.60:180,3,0	0/1:23,0:23:19.65:98,0,20	0/1:10,25:32:12.93:548,0,13	0/1:18,0:15:99:243,0,146	0/1:12,0:11:22.22:22,0,147	0/1:13,0:11:99:161,0,203	0/1:24,0:23:51.94:54,0,52	0/1:21,0:16:13.40:128,0,13	0/0:12,0:11:15.02:0,15,865	0/0:13,0:11:15.49:0,15,462	0/0:30,0:23:46.02:0,46,2794	0/1:16,0:13:13.23:19,0,13	0/1:25,0:23:99:502,0,197	0/1:17,0:16:53.07:264,0,53	0/0:12,0:6:14.67:0,15,137
chr10	80650865	.	CTCTCTCTCTCTCTCTCTCTCTCTG	C	3825.46	PASS	AB=0.996;AC=27;AF=0.519;AN=52;BaseQRankSum=2.383;DP=497;FS=4.960;HRun=0;HaplotypeScore=202.2285;InbreedingCoeff=-0.0450;MQ=40.14;MQ0=58;MQRankSum=1.168;QD=10.12;ReadPosRankSum=-0.346;VQSLOD=2.4606;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:19:62.87:63,0,158	1/1:12,0:10:5.95:148,6,0	./.	./.	0/0:15,12:23:9.99:0,10,59	0/1:26,0:24:91.45:151,0,91	0/0:18,0:16:8.98:0,9,73	0/1:12,0:10:11.04:40,0,11	0/1:14,0:14:8.90:9,0,62	0/1:26,0:22:68.46:533,0,68	1/1:25,0:23:7.55:53,8,0	0/1:12,0:11:3:3,0,572	0/1:12,0:11:60.52:61,0,104	1/1:12,0:12:2.30:163,2,0	1/1:21,0:21:2.31:129,2,0	1/1:34,0:31:9.03:477,9,0	0/1:16,0:13:24.69:260,0,25	0/1:12,0:11:25.93:26,0,65	0/1:13,0:11:54.58:261,0,55	0/1:24,0:23:5.14:79,0,5	1/1:23,0:18:16.25:232,16,0	0/0:12,0:11:15.02:0,15,787	0/0:13,0:11:12.41:0,12,374	0/0:31,0:24:45.99:0,46,2452	1/1:17,0:14:14.98:125,15,0	0/1:24,0:22:2.57:645,0,3	0/1:17,1:17:12.10:369,0,12	0/0:12,0:6:5.77:0,6,26
chr10	80650867	.	CTCTCTCTCTCTCTCTCTCTCTG	C	4284.85	PASS	AB=1.000;AC=35;AF=0.673;AN=52;BaseQRankSum=0.857;DP=476;FS=13.647;HRun=0;HaplotypeScore=179.0304;InbreedingCoeff=0.3566;MQ=40.17;MQ0=58;MQRankSum=0.611;QD=11.80;ReadPosRankSum=0.052;VQSLOD=2.8418;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:18:44.05:44,0,128	1/1:6,6:10:5.95:193,6,0	./.	./.	0/0:25,0:21:1.29:0,1,3	0/1:23,0:21:84.46:84,0,94	0/0:14,0:12:5.99:0,6,50	1/1:11,0:9:3.40:22,3,0	0/1:14,0:14:9.31:9,0,62	1/1:23,0:19:32.88:667,33,0	1/1:24,0:22:9:99,9,0	0/0:12,0:11:11.60:0,12,492	0/1:11,0:10:41.72:42,0,96	1/1:12,0:12:1.82:145,2,0	1/1:10,11:21:2.45:174,2,0	1/1:33,0:30:8.78:431,9,0	1/1:16,0:13:10.67:342,11,0	0/1:11,0:10:14.11:33,0,14	1/1:12,0:10:11.87:327,12,0	1/1:24,0:23:14.47:118,14,0	1/1:23,0:18:23.62:240,24,0	0/0:12,0:11:15.02:0,15,709	0/0:13,0:11:12.48:0,12,332	0/0:32,0:25:45.98:0,46,2163	1/1:16,0:13:11.99:100,12,0	1/1:23,0:21:35.88:766,36,0	1/1:18,0:17:14.96:395,15,0	1/1:12,0:6:4.55:55,5,0
chr10	80650887	.	CTG	C	2104.72	PASS	AB=1.000;AC=31;AF=0.574;AN=54;BaseQRankSum=-5.714;DP=515;FS=0.661;HRun=0;HaplotypeScore=113.2698;InbreedingCoeff=0.7336;MQ=45.70;MQ0=43;MQRankSum=-0.569;QD=6.34;ReadPosRankSum=-1.496;VQSLOD=2.5762;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:25:16.94:0,17,136	1/1:9,0:7:5.84:34,6,0	./.	0/0:8,0:3:2.99:0,3,24	0/1:24,0:20:0:0,0,0	0/0:21,0:20:14.56:0,15,104	0/0:23,0:21:11.14:0,11,99	1/1:6,8:14:23.88:190,24,0	0/1:12,0:12:6.79:7,0,83	1/1:23,0:19:26.93:237,27,0	1/1:25,0:24:20.98:172,21,0	0/0:9,0:8:8.92:0,9,67	0/0:13,0:13:17.73:0,18,120	0/0:17,0:17:5.82:0,6,49	1/1:19,0:19:2.92:17,3,0	1/1:34,0:31:5.87:42,6,0	1/1:16,0:15:19.76:149,20,0	1/1:15,0:14:23.83:177,24,0	1/1:16,0:16:17.90:155,18,0	1/1:27,0:26:26.93:212,27,0	1/1:22,0:19:29.78:236,30,0	0/0:18,0:17:32.94:0,33,270	0/0:11,0:9:14.80:0,15,121	0/0:28,0:21:38.90:0,39,328	0/1:18,0:15:3.98:128,0,4	1/1:23,0:22:23.89:201,24,0	1/1:20,0:19:23.90:183,24,0	1/1:15,0:11:23.66:162,24,0
chr10	80651579	.	AC	A	13802.88	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=17.508;DP=654;FS=0.596;HRun=1;HaplotypeScore=118.4623;InbreedingCoeff=0.9999;MQ=88.68;MQ0=0;MQRankSum=-5.276;QD=35.21;ReadPosRankSum=2.901;VQSLOD=4.5898;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.25:0,81,1269	1/1:0,14:14:42.13:521,42,0	0/0:24,0:24:72.23:0,72,1124	0/0:25,0:25:69.17:0,69,1003	1/1:0,28:28:78.25:967,78,0	0/0:31,0:31:93.32:0,93,1486	0/0:18,0:18:54.17:0,54,831	1/1:2,30:32:90.25:1090,90,0	0/0:18,0:18:54.17:0,54,840	1/1:2,28:30:81.21:976,81,0	1/1:0,25:25:72.23:889,72,0	0/0:10,0:10:30.09:0,30,456	0/0:29,0:29:87.30:0,87,1381	0/0:18,0:18:54.18:0,54,863	1/1:0,18:18:54.17:670,54,0	1/1:0,23:23:63.20:781,63,0	1/1:1,12:13:36.11:446,36,0	1/1:0,14:14:42.13:521,42,0	1/1:0,27:27:81.21:975,81,0	1/1:1,38:39:99:1413,114,0	1/1:0,24:24:72.23:893,72,0	0/0:26,0:26:78.25:0,78,1213	0/0:25,0:25:72.22:0,72,1125	0/0:11,0:11:33.11:0,33,527	1/1:0,18:18:54.17:670,54,0	1/1:2,31:33:96.28:1170,96,0	1/1:0,35:35:90.28:1115,90,0	1/1:0,19:19:57.18:707,57,0
chr10	80652782	.	CA	C	832.51	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=7.094;DP=512;FS=6.481;HRun=11;HaplotypeScore=65.3969;InbreedingCoeff=0.7546;MQ=77.00;MQ0=1;MQRankSum=1.348;QD=11.73;ReadPosRankSum=1.330;VQSLOD=3.2004;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,22:34:49.51:452,50,0	0/0:8,0:8:21.05:0,21,224	0/0:29,0:18:1.25:0,1,155	0/0:27,2:23:23.44:0,23,223	0/0:36,0:36:96.18:0,96,997	0/0:15,0:16:38.92:0,39,390	0/0:9,0:9:21.05:0,21,224	0/0:25,0:25:51.09:0,51,518	0/0:13,0:14:38.92:0,39,392	0/0:27,0:28:59.93:0,60,599	0/0:19,2:21:7.84:0,8,485	0/0:13,0:13:30.06:0,30,310	1/1:3,22:25:22.07:387,22,0	1/1:0,5:6:17.02:129,17,0	0/0:9,0:9:21.04:0,21,216	0/0:11,0:11:30.08:0,30,320	0/0:9,0:8:18.05:0,18,192	0/0:11,0:12:29.88:0,30,291	0/0:16,0:15:41.59:0,42,419	0/0:36,1:36:77.56:0,78,1011	0/1:6,0:6:9.60:10,0,113	0/0:20,0:20:51.11:0,51,536	0/0:16,0:17:44.95:0,45,460	0/0:5,0:5:12.01:0,12,118	0/0:16,0:16:45.11:0,45,477	0/0:22,0:23:57.01:0,57,590	0/0:19,0:19:28.85:0,29,485	0/0:18,0:18:48.12:0,48,509
chr10	80654273	.	TGG	T	425.39	PASS	AC=6;AF=0.250;AN=24;BaseQRankSum=3.777;DP=254;FS=7.432;HRun=2;HaplotypeScore=51.7175;InbreedingCoeff=0.9258;MQ=34.77;MQ0=96;MQRankSum=-3.672;QD=13.29;ReadPosRankSum=-1.216;VQSLOD=-0.0155;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,13:8:12.04:195,12,0	./.	0/0:14,0:7:18.06:0,18,340	0/0:23,0:12:36.06:0,36,678	./.	0/0:9,0:8:18.06:0,18,364	0/0:13,0:11:24.08:0,24,481	./.	0/0:31,0:26:78.23:0,78,1537	./.	./.	0/0:17,0:15:39.13:0,39,767	1/1:1,5:5:15.05:244,15,0	1/1:1,2:2:6.02:98,6,0	./.	./.	./.	./.	./.	./.	./.	0/0:23,0:18:54.11:0,54,1011	0/0:22,0:16:48.13:0,48,933	0/0:20,0:18:54.19:0,54,1096	./.	./.	./.	./.
chr10	80654464	.	C	CCT	374.26	PASS	AC=6;AF=0.333;AN=18;BaseQRankSum=-1.749;DP=335;FS=5.136;HRun=0;HaplotypeScore=24.2713;MQ=16.97;MQ0=230;MQRankSum=-1.943;QD=9.85;ReadPosRankSum=1.328;VQSLOD=2.2194;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	1/1:4,5:7:15.05:262,15,0	1/1:23,1:2:3.01:52,3,0	./.	0/0:24,0:22:39.11:0,39,505	./.	./.	0/0:16,0:13:27.09:0,27,364	1/1:2,3:3:9.03:157,9,0	./.	./.	0/0:3,0:2:3.01:0,3,40	./.	./.	./.	./.	./.	0/0:33,0:7:5.98:0,6,60	0/0:35,0:4:3.01:0,3,41	0/0:23,0:10:15.01:0,15,182	./.	./.	./.	./.
chr10	80677192	.	C	CTG	10070.91	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=15.592;DP=551;FS=2.277;HRun=0;HaplotypeScore=110.0851;InbreedingCoeff=0.9796;MQ=88.21;MQ0=0;MQRankSum=-8.705;QD=39.65;ReadPosRankSum=3.949;VQSLOD=6.6261;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.28:0,81,1321	1/1:0,4:4:12.04:165,12,0	0/0:23,0:23:66.16:0,66,981	0/0:26,0:26:75.22:0,75,1180	1/1:2,17:20:51.17:701,51,0	0/0:32,0:32:90.28:0,90,1420	0/0:18,0:18:51.17:0,51,830	1/1:0,18:24:72.23:1052,72,0	0/0:30,0:30:87.30:0,87,1420	1/1:3,8:12:27.09:399,27,0	1/1:2,11:13:30.10:413,30,0	0/0:22,0:22:66.23:0,66,1077	0/0:34,0:34:84.29:0,84,1364	0/0:21,0:21:63.22:0,63,1028	1/1:0,24:24:66.22:978,66,0	1/1:1,22:23:66.22:977,66,0	1/1:3,20:23:60.20:913,60,0	1/1:0,2:2:6.02:89,6,0	1/1:1,8:10:27.09:425,27,0	1/1:4,11:15:39.12:577,39,0	1/1:2,15:18:51.16:786,51,0	0/0:14,0:14:30.10:0,30,479	0/0:16,0:16:48.16:0,48,782	0/0:31,0:31:90.29:0,90,1429	1/1:0,15:15:42.14:606,42,0	1/1:3,18:21:60.20:935,60,0	1/1:0,19:19:54.18:788,54,0	1/1:2,6:8:18.06:268,18,0
chr10	80677193	.	A	AG	7433.17	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=17.727;DP=576;FS=0.000;HRun=0;HaplotypeScore=123.5717;InbreedingCoeff=0.9797;MQ=86.54;MQ0=0;MQRankSum=-9.623;QD=26.45;ReadPosRankSum=2.656;VQSLOD=5.2730;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.25:0,81,1113	1/1:0,4:4:12.01:113,12,0	0/0:23,0:23:63.16:0,63,855	0/0:26,0:26:72.24:0,72,994	1/1:5,17:22:50.11:432,50,0	0/0:31,0:31:90.28:0,90,1222	0/0:18,0:18:51.17:0,51,712	1/1:15,18:33:95.65:902,96,0	0/0:30,0:30:90.29:0,90,1241	1/1:3,8:11:29.86:322,30,0	1/1:4,11:15:30.02:282,30,0	0/0:22,0:22:66.22:0,66,917	0/0:34,0:34:84:0,84,1108	0/0:21,0:21:63.21:0,63,880	1/1:2,24:26:69.06:715,69,0	1/1:3,22:24:72.13:744,72,0	1/1:5,20:24:63.12:686,63,0	1/1:0,2:2:6.01:62,6,0	1/1:5,8:13:36.01:362,36,0	1/1:3,11:14:36.05:389,36,0	1/1:5,16:21:50.98:537,51,0	0/0:14,0:14:30.10:0,30,412	0/0:16,0:16:48.16:0,48,670	0/0:30,0:30:90.26:0,90,1212	1/1:2,15:17:42.07:423,42,0	1/1:5,18:23:58.97:654,59,0	1/1:3,19:21:60.12:621,60,0	1/1:2,6:8:18.04:189,18,0
chr10	80677258	.	T	TAC	4520.78	PASS	AB=0.799;AC=30;AF=0.536;AN=56;BaseQRankSum=8.359;DP=576;FS=13.056;HRun=0;HaplotypeScore=162.7309;InbreedingCoeff=0.2533;MQ=59.75;MQ0=25;MQRankSum=-6.986;QD=11.68;ReadPosRankSum=-2.488;VQSLOD=3.6434;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,5:28:6.66:316,0,7	1/1:2,2:4:5.75:60,6,0	0/1:60,0:15:8.60:9,0,47	0/0:66,0:17:6.30:0,6,40	1/1:14,12:26:8.58:220,9,0	0/0:25,0:25:30.96:0,31,351	0/0:21,0:21:23.13:0,23,230	0/1:17,14:31:18.14:544,0,18	0/0:17,0:16:24.07:0,24,290	0/1:10,4:14:9.34:321,0,9	0/1:8,3:11:7.80:110,0,8	0/0:13,0:13:36.07:0,36,419	0/1:12,12:25:7.64:195,0,8	0/1:12,4:16:10.96:128,0,11	1/1:14,4:18:17.10:86,17,0	0/1:14,6:20:12.91:223,0,13	1/1:7,6:13:26.82:354,27,0	1/1:5,0:5:3.83:69,4,0	1/1:9,2:11:0.76:200,1,0	1/1:11,7:18:36.92:454,37,0	0/1:21,4:25:23.73:104,0,24	0/0:8,0:8:12.04:0,12,145	0/0:11,0:11:12.04:0,12,145	0/0:28,0:28:57.16:0,57,678	1/1:8,6:14:17:117,17,0	1/1:18,6:23:41.81:570,42,0	1/1:15,5:20:32.84:406,33,0	0/1:3,1:4:5.88:35,0,6
chr10	80677274	.	CAG	C	1227.47	PASS	AB=0.976;AC=21;AF=0.375;AN=56;BaseQRankSum=1.790;DP=605;FS=0.431;HRun=0;HaplotypeScore=157.5869;InbreedingCoeff=-0.4834;MQ=48.88;MQ0=34;MQRankSum=0.161;QD=3.14;ReadPosRankSum=-1.503;VQSLOD=2.1792;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:4.24:104,0,4	0/1:4,0:4:4.89:5,0,7	0/0:62,0:10:5.73:0,6,130	0/0:71,0:12:4.14:0,4,77	0/1:27,0:27:57.31:57,0,78	0/0:18,0:18:17.04:0,17,246	0/1:23,0:23:99:122,0,140	0/1:25,0:24:89.64:188,0,90	0/0:11,0:10:27.03:0,27,386	0/1:15,1:16:46.67:47,0,79	0/1:14,0:14:16.02:16,0,39	0/0:17,0:17:47.68:0,48,575	0/1:27,0:27:4.05:127,0,4	0/1:19,0:19:3.36:65,0,3	0/1:16,0:16:13.46:13,0,53	0/1:24,0:24:52.62:60,0,53	0/1:16,0:16:14.24:109,0,14	0/1:10,0:10:11.33:43,0,11	0/1:7,4:10:40.05:63,0,40	0/1:18,1:19:50.87:51,0,69	0/1:33,1:33:15.33:36,0,15	0/0:6,0:6:0.73:0,1,162	0/1:12,0:12:8.27:8,0,199	0/0:27,0:27:71.51:0,72,994	0/1:14,0:14:17.55:18,0,31	0/1:23,3:25:21.72:144,0,22	0/1:17,0:17:55.85:87,0,56	0/1:6,0:5:3.99:16,0,4
chr10	80677276	.	GAC	G	846.72	PASS	AB=0.924;AC=16;AF=0.286;AN=56;BaseQRankSum=-3.088;DP=589;FS=0.642;HRun=0;HaplotypeScore=153.5661;InbreedingCoeff=-0.1882;MQ=50.26;MQ0=34;MQRankSum=1.441;QD=3.56;ReadPosRankSum=-3.218;VQSLOD=2.0371;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:6.79:0,7,46	0/1:4,1:5:21.04:60,0,21	0/0:63,0:11:18.04:0,18,205	0/0:72,0:13:8.53:0,9,103	0/1:25,2:27:66.53:109,0,67	0/0:19,0:19:5.96:0,6,44	0/0:20,0:20:7.41:0,7,69	0/1:24,1:24:34.47:55,0,34	0/0:11,0:10:21.07:0,21,330	0/1:14,1:15:2:154,0,2	0/0:13,0:13:8.18:0,8,36	0/0:17,0:17:26.81:0,27,421	0/0:25,0:26:12.38:0,12,78	0/0:18,0:18:3.37:0,3,26	0/1:14,1:15:39.04:53,0,39	0/1:21,2:23:19.87:92,0,20	0/1:15,2:17:18.25:136,0,18	0/1:10,0:10:9.44:69,0,9	1/1:11,0:10:1.03:31,1,0	0/0:19,0:19:19.70:0,20,95	0/1:28,0:28:0:0,0,0	0/1:4,2:6:23.93:24,0,132	0/1:10,1:11:15.69:16,0,220	0/0:27,0:27:46.29:0,46,792	0/0:13,0:13:10.93:0,11,48	0/1:19,4:22:34.96:130,0,35	0/1:14,0:14:45.68:46,0,52	0/1:7,0:6:6.18:20,0,6
chr10	80677278	.	C	CACACAG	7272.36	PASS	AB=0.983;AC=35;AF=0.625;AN=56;BaseQRankSum=3.567;DP=610;FS=39.098;HRun=0;HaplotypeScore=159.7705;InbreedingCoeff=0.5826;MQ=49.40;MQ0=32;MQRankSum=-4.794;QD=19.09;ReadPosRankSum=0.882;VQSLOD=2.5699;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:12.70:13,0,56	1/1:3,2:5:8.31:143,8,0	0/0:64,0:11:18.02:0,18,235	0/0:74,0:16:20.44:0,20,263	1/1:13,13:27:22.31:487,22,0	0/1:19,0:19:21.25:21,0,142	0/0:19,0:19:27.19:0,27,224	1/1:25,0:24:47.94:589,48,0	0/0:11,0:10:27.05:0,27,504	1/1:11,5:16:33.49:850,33,0	1/1:5,9:14:11.82:223,12,0	0/0:17,0:17:36.08:0,36,661	0/1:27,0:27:32.61:33,0,128	0/1:18,0:18:10.48:10,0,50	1/1:10,5:15:12.04:276,12,0	1/1:18,5:23:30.08:716,30,0	1/1:14,4:18:44.39:753,44,0	0/1:10,1:11:4.79:137,0,5	1/1:12,2:13:29.29:372,29,0	1/1:11,9:20:30.07:703,30,0	1/1:14,17:35:4.64:37,5,0	0/0:6,0:6:12.04:0,12,250	0/0:9,0:9:21.07:0,21,383	0/0:28,0:28:72.13:0,72,1263	1/1:2,11:16:6.01:148,6,0	1/1:17,5:21:53.28:986,53,0	1/1:8,6:14:20.26:621,20,0	1/1:1,8:8:8.99:155,9,0
chr10	80677280	.	C	CACAG	3145.71	PASS	AB=0.996;AC=25;AF=0.446;AN=56;BaseQRankSum=9.134;DP=612;FS=50.768;HRun=0;HaplotypeScore=158.9258;InbreedingCoeff=0.4330;MQ=47.14;MQ0=32;MQRankSum=-6.179;QD=10.11;ReadPosRankSum=1.891;VQSLOD=0.9952;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:4.39:4,0,93	1/1:5,0:5:0.86:58,1,0	0/0:63,0:8:18.05:0,18,266	0/0:73,0:15:23.69:0,24,229	1/1:28,0:28:10.35:182,10,0	0/0:20,0:20:32.41:0,32,249	0/0:19,0:19:27.89:0,28,223	0/1:27,0:26:4.39:368,0,4	0/0:11,0:10:27.05:0,27,435	0/1:16,0:16:29.46:326,0,29	1/1:14,0:14:13.30:102,13,0	0/0:14,0:14:39.07:0,39,606	0/0:27,0:27:33.31:0,33,224	0/0:18,0:18:1.19:0,1,52	1/1:15,1:16:5.14:99,5,0	1/1:22,0:22:16.84:286,17,0	0/1:18,0:18:12.99:332,0,13	0/0:11,0:11:6.99:0,7,78	0/1:14,0:13:22.43:135,0,22	1/1:20,0:20:32.08:405,32,0	0/1:36,1:36:16.36:29,0,16	0/0:6,0:6:12.04:0,12,204	0/0:9,0:9:21.07:0,21,338	0/0:29,0:29:75.08:0,75,1149	1/1:16,0:16:14.08:79,14,0	1/1:21,3:23:21.67:601,22,0	1/1:14,0:14:18.50:300,18,0	0/1:9,0:8:8.47:33,0,8
chr10	80677284	.	C	CACATAA	1950.36	PASS	AB=0.973;AC=16;AF=0.286;AN=56;BaseQRankSum=7.954;DP=625;FS=3.727;HRun=0;HaplotypeScore=178.3122;InbreedingCoeff=-0.2470;MQ=48.72;MQ0=31;MQRankSum=-7.774;QD=6.68;ReadPosRankSum=3.474;VQSLOD=2.6506;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:45.87:302,0,46	0/0:6,0:6:9.60:0,10,69	0/0:64,0:10:16.06:0,16,363	0/0:72,0:15:26.93:0,27,490	0/1:27,0:27:34.62:35,0,192	0/0:20,0:20:33.33:0,33,441	0/0:20,0:20:35.79:0,36,467	0/0:31,0:30:57.85:0,58,611	0/0:10,0:9:27.09:0,27,587	0/1:16,0:16:99:199,0,268	0/1:15,0:15:61.52:62,0,95	0/0:14,0:14:34.65:0,35,733	0/1:27,0:27:31.56:475,0,32	0/1:9,8:22:3.81:4,0,57	0/1:12,0:12:40.83:41,0,85	0/1:21,0:21:87.74:168,0,88	0/1:18,0:18:99:114,0,294	0/0:11,0:11:25.25:0,25,275	0/1:17,0:15:53.67:54,0,189	0/1:22,0:22:94.53:195,0,95	0/0:39,0:38:19.62:0,20,246	0/0:7,0:7:15.05:0,15,309	0/0:9,0:9:21.07:0,21,455	0/0:29,0:29:75.24:0,75,1555	1/1:16,0:16:5.96:45,6,0	0/1:26,0:25:99:198,0,411	0/1:12,0:12:36.37:202,0,36	0/1:10,0:9:17.99:18,0,51
chr10	80677432	.	AGAT	A	6257.26	PASS	AB=0.773;AC=32;AF=0.571;AN=56;BaseQRankSum=8.834;DP=375;FS=41.146;HRun=0;HaplotypeScore=132.9074;InbreedingCoeff=0.8611;MQ=77.14;MQ0=15;MQRankSum=-10.191;QD=25.96;ReadPosRankSum=7.009;VQSLOD=3.0707;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:89.98:0,90,1065	1/1:0,14:14:27.07:349,27,0	0/1:15,0:15:3.73:4,0,274	0/0:30,0:26:35.58:0,36,481	1/1:1,23:23:41.67:566,42,0	0/0:3,0:3:6.02:0,6,104	0/0:7,0:7:15.03:0,15,283	1/1:2,27:26:72.13:1182,72,0	0/0:7,0:7:21.06:0,21,435	1/1:1,14:14:39.10:606,39,0	1/1:2,15:14:15.05:202,15,0	0/0:7,0:7:21.06:0,21,383	0/0:11,0:11:26.79:0,27,260	0/0:14,0:14:37.60:0,38,353	1/1:1,9:8:15.05:203,15,0	1/1:0,9:8:15.05:217,15,0	1/1:1,4:4:3.01:40,3,0	1/1:4,5:7:12.04:206,12,0	1/1:1,15:15:42.12:645,42,0	1/1:1,13:13:21.07:284,21,0	0/1:1,5:5:0.01:0,0,0	0/0:5,0:5:15.04:0,15,262	0/0:4,0:4:12.03:0,12,237	0/0:8,0:8:21.07:0,21,459	1/1:0,17:16:30.10:406,30,0	1/1:4,12:15:36.12:527,36,0	1/1:2,5:7:15.05:214,15,0	1/1:1,17:18:45.62:605,46,0
chr10	80677434	.	AT	A	1793.41	PASS	AB=0.929;AC=32;AF=0.571;AN=56;BaseQRankSum=10.645;DP=368;FS=25.589;HRun=2;HaplotypeScore=136.7429;InbreedingCoeff=0.8187;MQ=76.54;MQ0=15;MQRankSum=-11.158;QD=7.54;ReadPosRankSum=5.875;VQSLOD=-0.6816;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:57.33:0,57,342	1/1:14,0:14:24.72:124,25,0	0/1:14,0:14:32.23:32,0,131	0/0:29,0:25:31.07:0,31,344	1/1:24,0:23:38.07:166,38,0	0/0:3,0:3:5.99:0,6,61	0/0:6,0:6:12.04:0,12,160	1/1:28,1:26:58.27:394,58,0	0/0:6,0:6:18.05:0,18,245	1/1:15,0:14:34.22:211,34,0	1/1:17,0:14:13.52:57,14,0	0/0:6,0:6:18.06:0,18,255	0/0:11,0:11:10.28:0,10,59	0/0:14,0:14:17.55:0,18,80	1/1:10,0:8:13.72:58,14,0	1/1:9,0:8:13.90:69,14,0	1/1:4,1:4:2.68:11,3,0	1/1:6,1:5:11.57:80,12,0	1/1:15,1:15:36.01:169,36,0	1/1:14,0:13:18.88:79,19,0	0/1:5,1:5:0.01:0,0,0	0/0:4,0:4:12.02:0,12,149	0/0:3,0:3:9.03:0,9,130	0/0:8,0:8:21.07:0,21,300	1/1:17,0:16:26.85:113,27,0	1/1:12,4:15:32.86:157,33,0	1/1:7,0:7:14.13:76,14,0	1/1:17,1:18:41.26:208,41,0
chr10	80677435	.	TTA	T	2417.36	PASS	AB=0.983;AC=34;AF=0.680;AN=50;BaseQRankSum=6.170;DP=366;FS=3.233;HRun=0;HaplotypeScore=139.2893;InbreedingCoeff=0.6589;MQ=76.45;MQ0=15;MQRankSum=-1.717;QD=8.57;ReadPosRankSum=3.929;VQSLOD=3.6033;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,31:38:60.19:739,60,0	1/1:14,0:14:24.95:116,25,0	0/0:13,0:13:2.04:0,2,6	0/1:28,1:24:64.07:72,0,64	1/1:23,0:23:39.72:192,40,0	./.	./.	0/0:28,0:26:8.40:0,8,36	0/0:6,0:6:12.04:0,12,196	1/1:14,0:14:12.91:94,13,0	1/1:15,0:14:14.20:69,14,0	0/0:6,0:6:9.03:0,9,147	1/1:3,8:11:12.04:148,12,0	1/1:4,10:14:24.08:295,24,0	1/1:9,0:8:14.20:69,14,0	1/1:9,0:8:10.19:53,10,0	1/1:5,0:4:2.84:14,3,0	0/1:6,0:5:1.58:8,0,2	1/1:16,0:15:16.37:117,16,0	1/1:13,0:13:19.89:96,20,0	./.	0/0:4,0:4:3.01:0,3,49	0/0:3,0:3:6.02:0,6,98	0/0:8,0:8:12.04:0,12,187	1/1:17,0:16:28.41:137,28,0	1/1:16,0:15:31.39:159,31,0	1/1:5,0:7:6.71:48,7,0	1/1:18,0:18:18.25:161,18,0
chr10	80677443	.	ATATATATATG	A	9509.90	PASS	AB=0.889;AC=31;AF=0.554;AN=56;BaseQRankSum=9.354;DP=326;FS=2.522;HRun=0;HaplotypeScore=147.8868;InbreedingCoeff=0.8075;MQ=72.06;MQ0=10;MQRankSum=-10.152;QD=46.62;ReadPosRankSum=2.868;VQSLOD=4.8500;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:75.24:0,75,2400	1/1:2,9:11:27.09:722,27,0	0/0:9,0:9:6.23:0,6,45	0/0:28,0:23:27.36:0,27,357	1/1:4,19:22:41.65:1158,42,0	0/0:2,0:2:3.01:0,3,44	0/0:2,0:2:3.01:0,3,44	1/1:23,1:21:53.19:499,53,0	0/0:5,0:5:15.05:0,15,604	1/1:9,6:15:38.52:754,39,0	1/1:7,7:13:17.55:425,18,0	0/0:6,0:6:18.05:0,18,711	0/0:10,0:10:12.04:0,12,382	0/0:11,0:11:27.09:0,27,820	1/1:1,5:5:15.05:417,15,0	1/1:2,5:6:15:351,15,0	1/1:4,1:4:5.38:91,5,0	0/1:7,1:6:1.42:146,0,1	1/1:7,9:15:39.06:886,39,0	1/1:5,8:12:24.08:630,24,0	1/1:5,0:5:2.68:11,3,0	0/0:2,0:2:6.02:0,6,265	0/0:2,0:2:6.02:0,6,318	0/0:6,0:6:18:0,18,624	1/1:7,13:19:35.53:858,36,0	1/1:2,11:12:33.11:938,33,0	1/1:1,5:6:15.05:380,15,0	1/1:1,17:18:47.67:1244,48,0
chr10	80679055	.	A	AGT	577.44	PASS	AB=0.966;AC=27;AF=0.587;AN=46;BaseQRankSum=-2.456;DP=471;FS=1.233;HRun=0;HaplotypeScore=100.7380;InbreedingCoeff=-0.0519;MQ=69.99;MQ0=7;MQRankSum=1.760;QD=1.86;ReadPosRankSum=0.028;VQSLOD=2.0879;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:4.54:0,5,16	./.	./.	./.	0/1:18,0:17:4.56:37,0,5	0/0:11,0:11:1.08:0,1,3	1/1:12,0:11:5.74:30,6,0	1/1:20,0:20:0.47:1,0,0	0/1:17,0:17:25.59:77,0,26	1/1:23,0:23:7.53:63,8,0	1/1:13,0:13:3:25,3,0	0/1:17,0:17:20.62:21,0,61	0/1:9,0:9:8.17:12,0,8	0/1:19,0:18:11.81:17,0,12	0/1:11,0:11:0:0,0,0	./.	0/1:27,0:27:10.33:66,0,10	1/1:15,0:14:5.77:34,6,0	1/1:6,0:6:0.47:1,0,0	0/0:18,0:17:2.99:0,3,23	0/1:21,0:20:0.35:0,0,0	0/1:17,0:17:33.70:55,0,34	0/1:6,4:12:28.04:77,0,28	0/1:21,1:22:4.53:149,0,5	1/1:14,0:14:1.96:8,2,0	1/1:16,0:15:4.36:29,4,0	0/0:13,0:13:14.41:0,14,77	./.
chr10	80679086	.	GTGTGTGTGTGTGTGTT	G	1664.64	PASS	AB=0.952;AC=29;AF=0.537;AN=54;BaseQRankSum=0.635;DP=486;FS=24.848;HRun=0;HaplotypeScore=166.4442;InbreedingCoeff=0.1876;MQ=46.95;MQ0=36;MQRankSum=0.751;QD=5.17;ReadPosRankSum=-1.669;VQSLOD=1.0607;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,30:52:33.80:64,0,34	1/1:7,0:7:0.36:0,0,0	0/0:25,0:7:11.05:0,11,102	0/0:42,0:7:11.80:0,12,77	0/1:24,0:22:99:107,0,152	0/0:12,0:11:0.47:0,0,1	0/1:11,0:10:8.50:9,0,88	0/1:15,0:9:56.90:57,0,62	0/0:18,0:18:45.56:0,46,1307	0/1:18,0:18:99:116,0,191	0/1:15,0:15:0.88:102,0,1	0/0:12,0:11:23.36:0,23,678	1/1:9,0:9:15:245,15,0	1/1:9,2:10:9.03:118,9,0	1/1:8,0:8:2.39:17,2,0	1/1:7,1:6:12.01:181,12,0	0/1:26,0:26:99:216,0,117	0/1:14,0:13:21.10:21,0,96	1/1:8,0:7:2.57:20,3,0	1/1:16,0:13:1.97:7,2,0	1/1:25,0:21:7.57:89,8,0	0/0:11,0:11:18.06:0,18,833	0/0:13,0:13:20.01:0,20,708	0/0:30,0:29:57.14:0,57,1853	1/1:19,0:19:3.27:14,3,0	0/1:19,0:18:27.74:28,0,101	1/1:13,1:13:23.32:422,23,0	./.
chr10	80679088	.	GTGTGTGTGTGTGTT	G	2176.13	PASS	AB=0.987;AC=30;AF=0.556;AN=54;BaseQRankSum=-0.882;DP=480;FS=29.598;HRun=0;HaplotypeScore=150.1979;InbreedingCoeff=0.3580;MQ=46.96;MQ0=36;MQRankSum=-0.282;QD=7.50;ReadPosRankSum=-2.106;VQSLOD=0.7667;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:49,0:47:27.23:31,0,27	1/1:7,0:7:0.34:0,0,0	0/0:28,0:8:14.01:0,14,121	0/0:41,0:5:11.72:0,12,76	0/1:23,1:22:34.90:191,0,35	1/1:12,0:11:2.79:25,3,0	0/1:12,0:10:9.20:9,0,46	0/1:16,0:10:21.54:79,0,22	0/0:18,0:18:45.42:0,45,994	0/1:17,0:17:99:212,0,142	1/1:15,0:15:8.63:177,9,0	0/0:12,0:11:20.38:0,20,552	1/1:9,0:9:15:209,15,0	1/1:10,0:9:8.02:71,8,0	1/1:8,0:8:2.94:18,3,0	1/1:7,0:5:12.01:175,12,0	0/1:24,1:25:53.71:376,0,54	1/1:13,0:12:2.34:34,2,0	1/1:7,0:6:7.87:44,8,0	0/0:9,8:14:2.98:0,3,22	1/1:26,0:22:17.90:137,18,0	0/0:11,0:11:18.05:0,18,714	0/0:13,0:13:19.92:0,20,574	0/0:30,0:29:57.11:0,57,1575	0/0:19,0:19:0.57:0,1,3	1/1:19,0:18:13.37:130,13,0	1/1:13,1:13:24.81:435,25,0	./.
chr10	80679090	.	GTGTGTGTGTGTT	G	2584.92	PASS	AB=0.907;AC=34;AF=0.630;AN=54;BaseQRankSum=-1.738;DP=473;FS=21.208;HRun=0;HaplotypeScore=135.7289;InbreedingCoeff=0.5466;MQ=46.77;MQ0=37;MQRankSum=-0.563;QD=8.73;ReadPosRankSum=-0.910;VQSLOD=0.5987;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:47,0:46:19.11:20,0,19	1/1:7,0:7:0.37:0,0,0	0/0:30,0:9:20.02:0,20,179	0/0:45,0:6:14.56:0,15,89	1/1:24,0:22:13.57:257,14,0	1/1:12,0:11:2.80:49,3,0	1/1:13,0:11:4.68:84,5,0	0/1:14,0:8:2.25:99,0,2	0/0:18,0:18:39.62:0,40,922	0/1:7,7:14:99:268,0,117	1/1:14,1:15:17.20:192,17,0	0/0:11,0:10:20.37:0,20,530	1/1:9,0:9:14.83:174,15,0	1/1:10,0:9:8.16:51,8,0	1/1:4,3:7:2.93:18,3,0	1/1:7,0:5:12.01:205,12,0	0/1:24,1:25:7.38:441,0,7	1/1:12,0:11:18.52:116,19,0	1/1:5,0:5:8.89:45,9,0	0/0:17,0:14:2.99:0,3,24	1/1:25,0:21:17.91:137,18,0	0/0:10,0:10:18.05:0,18,602	0/0:13,0:13:20.26:0,20,496	0/0:32,0:31:62.77:0,63,1366	1/1:2,17:19:3.48:40,3,0	1/1:17,0:16:17.62:229,18,0	1/1:13,0:12:17.78:344,18,0	./.
chr10	80679092	.	GTGTGTGTGTT	G	2298.81	PASS	AB=1.000;AC=34;AF=0.630;AN=54;BaseQRankSum=-0.737;DP=471;FS=20.818;HRun=0;HaplotypeScore=125.2257;InbreedingCoeff=0.6258;MQ=48.10;MQ0=37;MQRankSum=-0.813;QD=7.85;ReadPosRankSum=-0.115;VQSLOD=0.8622;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:41:5.48:5,0,14	0/0:7,0:7:0:0,0,0	0/0:35,0:9:20.02:0,20,179	0/0:47,0:8:17.56:0,18,117	1/1:24,0:22:26.69:260,27,0	1/1:3,9:11:2.80:92,3,0	1/1:13,0:11:9.28:80,9,0	1/1:15,0:9:14.10:114,14,0	0/0:21,0:21:48.60:0,49,854	0/1:13,0:13:92.92:191,0,93	1/1:15,0:15:16.07:133,16,0	0/0:11,0:10:20.18:0,20,462	1/1:8,0:8:15:178,15,0	0/1:10,0:9:7.60:30,0,8	1/1:7,0:7:2.93:18,3,0	1/1:7,0:5:12.01:160,12,0	1/1:26,0:26:31.52:424,32,0	1/1:12,0:11:20.15:126,20,0	1/1:3,0:3:7.95:44,8,0	0/1:16,0:13:0:0,0,0	1/1:24,0:20:18.38:137,18,0	0/0:10,0:10:17.79:0,18,504	0/0:13,0:13:20.26:0,20,426	0/0:32,0:31:63.05:0,63,1152	1/1:19,0:19:3.38:11,3,0	1/1:14,0:13:17.80:178,18,0	1/1:11,0:11:20.77:304,21,0	./.
chr10	80679093	.	T	TGT	561.28	PASS	AB=0.982;AC=25;AF=0.543;AN=46;BaseQRankSum=-2.854;DP=469;FS=2.761;HRun=0;HaplotypeScore=95.7302;InbreedingCoeff=-0.0518;MQ=47.97;MQ0=37;MQRankSum=1.382;QD=1.99;ReadPosRankSum=-1.674;VQSLOD=1.8005;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:4.54:0,5,16	./.	./.	0/0:49,0:9:0:0,0,0	0/1:24,0:22:4.56:37,0,5	0/0:12,0:11:1.08:0,1,3	1/1:13,0:11:5.74:30,6,0	1/1:15,0:9:0.47:1,0,0	0/1:22,0:22:25.59:78,0,26	1/1:12,0:12:7.69:62,8,0	1/1:15,0:15:3:25,3,0	0/1:11,0:10:20.62:21,0,61	0/1:8,0:8:8.17:12,0,8	0/1:9,0:8:11.81:17,0,12	0/1:6,0:6:0:0,0,0	./.	0/1:24,0:24:12.91:48,0,13	1/1:12,0:11:6.25:35,6,0	./.	0/0:16,0:13:2.99:0,3,23	0/1:23,0:19:0:0,0,0	0/1:10,0:10:33.70:55,0,34	0/1:13,0:13:28.04:77,0,28	0/1:24,7:31:4.53:149,0,5	1/1:19,0:19:1.96:8,2,0	1/1:14,0:13:4.35:30,4,0	0/0:13,0:12:14.41:0,14,77	./.
chr10	80679098	.	GTGTT	G	2219.11	PASS	AB=1.000;AC=37;AF=0.712;AN=52;BaseQRankSum=-0.870;DP=473;FS=12.754;HRun=0;HaplotypeScore=97.0631;InbreedingCoeff=0.5632;MQ=48.92;MQ0=42;MQRankSum=-1.248;QD=7.76;ReadPosRankSum=-1.018;VQSLOD=1.2476;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:38:0.01:1,0,0	0/0:1,6:7:0:0,0,0	0/0:44,0:10:22.05:0,22,185	0/0:53,0:10:16.71:0,17,132	1/1:22,0:20:32.51:268,33,0	1/1:10,0:9:3.01:32,3,0	1/1:14,0:12:13.99:96,14,0	1/1:14,0:8:20.74:139,21,0	0/0:22,0:22:49.46:0,49,534	0/1:11,0:11:35.10:90,0,35	1/1:15,0:15:23.56:189,24,0	0/1:11,0:10:4.60:5,0,188	1/1:9,0:9:17.92:146,18,0	1/1:9,0:8:4.91:72,5,0	1/1:7,0:7:5.92:43,6,0	1/1:7,0:5:14.91:115,15,0	1/1:21,0:21:44.36:367,44,0	1/1:12,0:11:20.66:134,21,0	1/1:3,0:3:7.95:44,8,0	./.	1/1:23,0:19:23.88:183,24,0	0/1:11,0:11:15.17:15,0,200	0/0:14,0:14:8.43:0,8,251	0/0:33,0:32:41.25:0,41,634	1/1:19,0:19:3.43:20,3,0	1/1:15,0:14:28.45:228,28,0	1/1:13,0:12:23.75:201,24,0	./.
chr10	80679100	.	GTT	G	2206.60	PASS	AB=1.000;AC=37;AF=0.712;AN=52;BaseQRankSum=-0.605;DP=474;FS=8.489;HRun=3;HaplotypeScore=87.7283;InbreedingCoeff=0.5491;MQ=50.35;MQ0=44;MQRankSum=-1.031;QD=7.97;ReadPosRankSum=-0.284;VQSLOD=-0.3945;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:37:2.75:16,3,0	0/0:7,0:7:0:0,0,0	0/0:49,0:13:13.04:0,13,190	0/0:56,0:12:19.58:0,20,148	1/1:20,0:18:32.77:254,33,0	1/1:10,0:9:2.99:24,3,0	1/1:16,0:14:20.02:147,20,0	1/1:14,0:8:20.75:141,21,0	0/0:23,0:23:42:0,42,390	0/1:10,0:10:35.18:73,0,35	1/1:13,0:13:23.93:190,24,0	0/1:11,0:10:26.40:26,0,112	1/1:7,0:8:17.86:132,18,0	1/1:7,0:7:11.84:82,12,0	1/1:7,0:7:5.92:43,6,0	1/1:6,1:5:14.91:115,15,0	1/1:19,1:20:52.62:355,53,0	1/1:12,0:11:20.68:135,21,0	1/1:3,0:3:7.95:44,8,0	./.	1/1:22,0:18:23.88:183,24,0	0/1:12,0:12:12.96:13,0,163	0/0:13,1:14:10.79:0,11,203	0/0:35,0:34:42.22:0,42,520	1/1:18,1:19:3.43:20,3,0	1/1:14,0:13:28.17:228,28,0	1/1:13,0:12:23.60:159,24,0	./.
chr10	80679974	.	TTTTATATATATATATATATATATATATATATATATATATA	T	8966.78	PASS	AC=30;AF=0.577;AN=52;BaseQRankSum=3.932;DP=203;FS=35.841;HRun=0;HaplotypeScore=155.0084;InbreedingCoeff=0.6380;MQ=59.43;MQ0=1;MQRankSum=-4.173;QD=52.13;ReadPosRankSum=5.681;VQSLOD=2.4846;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:8.97:0,9,73	1/1:0,4:4:3.01:311,3,0	0/0:4,0:4:8.99:0,9,81	0/0:3,0:2:5.99:0,6,49	1/1:1,16:17:9.03:893,9,0	0/0:2,0:2:3:0,3,27	./.	1/1:21,0:21:47.52:506,48,0	0/0:3,0:3:9.01:0,9,110	1/1:11,0:11:23.76:166,24,0	1/1:1,12:13:6.02:621,6,0	0/0:4,0:4:12.01:0,12,110	0/0:1,0:1:3.01:0,3,136	0/0:3,0:3:8.97:0,9,74	1/1:0,10:10:6.02:621,6,0	1/1:0,12:12:8.69:932,9,0	1/1:3,0:3:2.94:22,3,0	1/1:1,5:5:3.01:311,3,0	1/1:5,0:5:11.91:88,12,0	1/1:0,22:22:8.99:641,9,0	./.	0/0:1,0:1:3:0,3,28	0/0:3,0:3:6.01:0,6,106	0/0:1,0:1:3:0,3,27	1/1:7,0:7:3:25,3,0	1/1:0,14:14:20.94:1033,21,0	1/1:0,17:17:21.07:2175,21,0	1/1:0,10:10:6.02:622,6,0
chr10	80680187	.	T	TA	14468.49	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=9.348;DP=423;FS=23.536;HRun=0;HaplotypeScore=76.0712;InbreedingCoeff=0.9883;MQ=65.95;MQ0=0;MQRankSum=-1.852;QD=40.08;ReadPosRankSum=-0.363;VQSLOD=2.8854;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:42.14:617,42,0	1/1:0,7:7:18.06:266,18,0	0/0:4,0:4:12.04:0,12,157	0/0:8,0:8:17.93:0,18,190	1/1:1,20:21:51.08:718,51,0	1/1:0,11:11:33.11:484,33,0	1/1:0,8:8:24.08:351,24,0	1/1:1,34:35:96.32:1419,96,0	0/0:15,0:15:45.15:0,45,629	1/1:1,19:20:57.18:823,57,0	1/1:0,19:19:51.17:747,51,0	0/0:9,0:9:27.09:0,27,378	1/1:0,9:9:27.09:395,27,0	1/1:2,10:12:35.77:476,36,0	1/1:0,16:16:42.14:618,42,0	1/1:0,19:19:57.19:840,57,0	1/1:0,30:29:81.27:1190,81,0	1/1:1,12:13:30.10:435,30,0	1/1:0,15:15:45.12:628,45,0	1/1:0,27:27:81.27:1190,81,0	1/1:0,13:13:33.11:486,33,0	0/0:9,0:9:27.08:0,27,363	0/0:10,0:10:30.10:0,30,419	0/0:7,0:7:21.07:0,21,293	1/1:0,12:12:24.08:354,24,0	1/1:0,22:22:66.22:974,66,0	1/1:0,26:26:78.26:1148,78,0	1/1:1,8:9:20.85:311,21,0
chr10	80680420	.	TG	T	1467.35	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.699;DP=552;FS=7.627;HRun=8;HaplotypeScore=85.0581;InbreedingCoeff=0.9701;MQ=77.57;MQ0=4;MQRankSum=-0.249;QD=22.23;ReadPosRankSum=2.347;VQSLOD=3.9695;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:60.03:568,60,0	0/0:5,0:5:15.05:0,15,181	0/0:53,0:45:81.48:0,81,1002	0/0:54,0:30:50.06:0,50,479	0/0:23,0:23:66.19:0,66,783	0/0:21,0:21:57.17:0,57,688	0/0:17,1:18:22.15:0,22,517	0/0:20,0:20:54.11:0,54,625	0/0:14,0:14:39.11:0,39,459	0/0:23,0:23:66.19:0,66,781	0/0:13,0:13:33.96:0,34,376	0/0:13,0:13:38.44:0,38,410	1/1:2,22:24:57.09:550,57,0	1/1:0,19:19:51.08:492,51,0	0/0:25,0:25:57.17:0,57,687	0/0:18,0:18:30.62:0,31,583	0/0:13,0:13:39.12:0,39,471	0/0:14,0:14:33.10:0,33,396	0/0:13,0:13:27.07:0,27,314	0/0:15,0:15:39.11:0,39,461	0/0:15,0:15:42.10:0,42,482	0/0:14,0:14:39.11:0,39,458	0/0:23,0:23:63.17:0,63,736	0/0:18,1:19:22.18:0,22,540	0/0:13,0:13:36.09:0,36,412	0/0:16,1:17:22.18:0,22,548	0/0:25,0:25:72.12:0,72,802	0/0:3,0:3:9.03:0,9,109
chr10	80680613	.	G	GGATA	22660.98	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-2.169;DP=476;FS=6.576;HRun=0;HaplotypeScore=85.5908;InbreedingCoeff=0.9850;MQ=83.35;MQ0=0;MQRankSum=-10.129;QD=62.95;ReadPosRankSum=1.407;VQSLOD=6.6158;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:57.20:1472,57,0	1/1:2,8:10:18.06:490,18,0	0/0:22,0:22:56.14:0,56,1032	0/0:12,0:12:29.97:0,30,502	1/1:3,25:31:75.26:1922,75,0	1/1:0,16:16:42.14:1143,42,0	1/1:1,11:13:27.09:734,27,0	1/1:8,21:32:87.23:2049,87,0	0/0:18,0:18:54.19:0,54,1031	1/1:5,11:18:45.13:1029,45,0	1/1:4,16:20:51.18:1358,51,0	0/0:12,0:12:36.11:0,36,659	1/1:1,20:22:57.20:1537,57,0	1/1:2,11:15:30.10:792,30,0	1/1:1,11:16:36.12:978,36,0	1/1:0,13:13:33.11:898,33,0	1/1:4,6:10:15.05:408,15,0	1/1:0,6:6:15.05:408,15,0	1/1:2,10:14:39.09:828,39,0	1/1:6,22:31:72.25:1895,72,0	1/1:3,6:10:18.06:443,18,0	0/0:16,0:16:45.13:0,45,796	0/0:26,0:26:72.23:0,72,1331	0/0:10,0:10:30.09:0,30,549	1/1:2,9:11:27.09:708,27,0	1/1:5,20:26:75.24:1911,75,0	1/1:4,14:21:54.19:1340,54,0	1/1:1,3:4:12.04:318,12,0
chr10	80681113	.	G	GTA	16681.33	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-14.908;DP=681;FS=2.445;HRun=0;HaplotypeScore=74.4625;InbreedingCoeff=0.9935;MQ=90.56;MQ0=2;MQRankSum=-3.976;QD=46.99;ReadPosRankSum=2.251;VQSLOD=6.0943;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:72.24:0,72,1008	1/1:0,4:4:12.04:216,12,0	0/0:23,0:22:54.18:0,54,734	0/0:32,0:32:85.16:0,85,1145	1/1:2,29:31:78.27:1405,78,0	0/0:29,0:29:78.25:0,78,1075	0/0:20,0:20:54.16:0,54,738	1/1:6,20:26:60.19:1051,60,0	0/0:32,0:32:87.26:0,87,1184	1/1:1,25:25:75.24:1306,75,0	1/1:2,23:24:66.23:1188,66,0	0/0:19,0:19:48.16:0,48,672	0/0:24,0:24:69.23:0,69,966	0/0:31,0:31:78.26:0,78,1091	1/1:0,26:26:69.24:1242,69,0	1/1:1,18:19:51.17:918,51,0	1/1:2,11:13:34.67:598,35,0	1/1:2,5:7:15.05:270,15,0	1/1:1,19:20:57.18:998,57,0	1/1:2,38:40:99:1982,111,0	1/1:3,25:28:63.22:1134,63,0	0/0:35,0:35:99:0,102,1428	0/0:34,0:34:99:0,99,1349	0/0:18,0:18:54.18:0,54,756	1/1:1,20:21:54.19:973,54,0	1/1:0,20:20:57.20:1026,57,0	1/1:1,31:32:81.28:1458,81,0	1/1:0,17:17:51.17:916,51,0
chr10	80681202	.	C	CA	2891.57	PASS	AB=0.877;AC=39;AF=0.696;AN=56;BaseQRankSum=11.640;DP=561;FS=4.129;HRun=8;HaplotypeScore=134.4419;InbreedingCoeff=0.7190;MQ=73.17;MQ0=5;MQRankSum=-7.850;QD=7.92;ReadPosRankSum=-2.817;VQSLOD=0.6845;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:36.76:184,37,0	0/1:4,0:4:5.16:5,0,14	0/0:26,0:21:12.98:0,13,189	0/0:29,0:23:20.32:0,20,250	1/1:20,3:23:10.10:116,10,0	1/1:30,0:29:47.56:219,48,0	1/1:21,0:21:16.79:77,17,0	1/1:22,5:27:14.59:232,15,0	0/0:21,0:21:57.03:0,57,521	1/1:19,2:20:27.84:175,28,0	1/1:20,2:21:28.52:189,29,0	0/0:21,0:21:60.02:0,60,545	1/1:15,0:15:34.19:172,34,0	1/1:21,0:21:31.25:153,31,0	0/1:14,5:19:6.25:247,0,6	1/1:13,1:14:4.76:159,5,0	1/1:8,3:11:16.70:83,17,0	1/1:3,1:4:8.60:58,9,0	1/1:14,2:16:1.54:130,2,0	0/1:21,5:25:3.59:160,0,4	1/1:6,2:8:11.76:103,12,0	0/0:35,0:35:90.05:0,90,824	0/0:35,0:35:87.02:0,87,791	0/0:28,0:29:76.80:0,77,672	1/1:8,3:11:12.35:118,12,0	1/1:9,7:16:25.21:216,25,0	1/1:19,2:21:30.81:171,31,0	1/1:9,2:11:15.09:123,15,0
chr10	80681206	.	A	AAAAC	1787.67	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=0.416;DP=544;FS=9.793;HRun=0;HaplotypeScore=167.7666;InbreedingCoeff=0.7375;MQ=70.99;MQ0=3;MQRankSum=1.151;QD=15.54;ReadPosRankSum=2.796;VQSLOD=2.8840;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:4.26:36,0,4	0/0:4,0:4:10.80:0,11,90	0/0:26,0:20:0.14:0,0,235	0/0:33,0:25:33.66:0,34,434	0/0:21,0:21:32.91:0,33,232	1/1:1,29:29:51.17:1294,51,0	1/1:0,19:20:18.06:462,18,0	0/0:24,0:24:43.63:0,44,327	0/0:22,0:22:60.19:0,60,988	0/0:18,0:18:4.36:0,4,168	0/0:18,0:18:5.01:0,5,148	0/0:22,0:22:63.20:0,63,1006	1/1:16,0:16:8.37:88,8,0	1/1:22,0:22:19.99:65,20,0	0/0:21,0:21:42.78:0,43,348	0/0:14,0:14:31.24:0,31,297	0/0:10,0:10:21.08:0,21,139	0/0:4,0:4:11.80:0,12,93	0/0:13,0:13:30.32:0,30,226	0/0:24,0:23:46.87:0,47,389	0/0:7,0:7:6.73:0,7,33	0/0:32,0:32:93.30:0,93,1477	0/0:33,0:33:90.29:0,90,1398	0/0:27,0:27:74.40:0,74,1325	0/0:10,0:10:21.41:0,21,158	0/0:16,0:16:27.27:0,27,196	0/0:18,0:18:28.23:0,28,255	0/0:11,0:11:16.57:0,17,112
chr10	80681213	.	AAAC	A	2494.17	PASS	AB=0.857;AC=27;AF=0.482;AN=56;BaseQRankSum=10.601;DP=562;FS=2.194;HRun=0;HaplotypeScore=177.1432;InbreedingCoeff=0.6597;MQ=66.70;MQ0=3;MQRankSum=-11.939;QD=9.56;ReadPosRankSum=-4.829;VQSLOD=1.8992;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:44.64:0,45,648	0/1:4,0:4:23.89:28,0,24	0/0:24,0:18:30.33:0,30,466	0/0:36,0:27:40.36:0,40,784	1/1:25,4:29:35.41:221,35,0	0/0:27,0:26:54.18:0,54,1159	0/0:19,0:19:24.08:0,24,481	0/1:20,4:24:16.22:189,0,16	0/0:22,0:22:66.20:0,66,1368	1/1:20,5:25:14.79:232,15,0	1/1:14,7:21:35.26:260,35,0	0/0:21,0:21:63.21:0,63,1293	0/0:17,0:17:39.13:0,39,561	0/0:24,0:24:38.93:0,39,546	1/1:14,6:20:14.99:217,15,0	1/1:7,8:15:24.90:247,25,0	1/1:9,2:11:11.07:72,11,0	1/1:2,2:4:8.75:70,9,0	0/1:13,3:16:11.43:156,0,11	0/1:18,6:23:3.57:281,0,4	1/1:5,1:6:11.75:75,12,0	0/0:32,0:32:87.29:0,87,1811	0/0:30,0:30:87.28:0,87,1729	0/0:26,0:26:78.27:0,78,1732	1/1:12,4:16:12.44:169,12,0	1/1:14,2:16:30.24:188,30,0	0/1:16,6:21:4.71:202,0,5	1/1:4,4:8:14.37:99,14,0
chr10	80681214	.	AAC	A	2444.42	PASS	AB=0.871;AC=30;AF=0.536;AN=56;BaseQRankSum=11.387;DP=557;FS=4.989;HRun=0;HaplotypeScore=167.2750;InbreedingCoeff=0.8017;MQ=66.85;MQ0=3;MQRankSum=-11.488;QD=9.51;ReadPosRankSum=-6.669;VQSLOD=1.5076;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:44.15:0,44,487	0/1:3,1:4:7.72:8,0,20	0/0:25,0:19:6.30:0,6,345	0/0:36,0:27:14.51:0,15,663	1/1:28,1:29:40.88:268,41,0	0/0:26,0:25:54.18:0,54,968	0/0:18,0:18:24.07:0,24,395	1/1:24,0:24:3.46:193,3,0	0/0:22,0:22:66.20:0,66,1152	1/1:22,1:22:33.73:299,34,0	1/1:21,0:21:42.01:289,42,0	0/0:21,0:21:63.08:0,63,1082	0/0:18,0:18:42.08:0,42,455	0/0:22,0:22:37.92:0,38,414	1/1:20,0:20:13.87:183,14,0	1/1:15,0:15:29.94:222,30,0	1/1:11,0:11:11.17:76,11,0	1/1:4,0:4:8.60:63,9,0	0/1:15,1:16:6.08:145,0,6	1/1:21,2:22:7.59:233,8,0	1/1:5,1:6:10.91:48,11,0	0/0:32,0:32:87.29:0,87,1544	0/0:31,0:31:93.08:0,93,1499	0/0:26,0:26:78.27:0,78,1422	1/1:15,1:16:23.74:168,24,0	1/1:16,0:16:29.36:169,29,0	1/1:20,1:20:10.66:207,11,0	1/1:8,0:8:14:88,14,0
chr10	80681216	.	CAAAACAAAACA	C	8428	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=11.677;DP=546;FS=21.842;HRun=0;HaplotypeScore=235.9053;InbreedingCoeff=0.8954;MQ=65.14;MQ0=3;MQRankSum=-13.106;QD=34.26;ReadPosRankSum=-4.818;VQSLOD=2.5860;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:48.14:0,48,2003	0/1:6,0:6:5.05:54,0,5	0/0:22,0:16:41.49:0,41,1161	0/0:36,0:27:69.60:0,70,2116	1/1:27,2:29:28.91:917,29,0	0/0:28,0:27:60.68:0,61,3022	0/0:20,0:20:33.11:0,33,1303	1/1:22,0:22:22.54:565,23,0	0/0:23,0:23:63.22:0,63,3216	1/1:22,0:21:42.05:846,42,0	1/1:19,0:19:26.09:614,26,0	0/0:21,0:21:63.19:0,63,3075	0/0:18,0:18:42.14:0,42,1825	0/0:23,0:23:41.97:0,42,1689	1/1:19,2:21:30.34:716,30,0	1/1:13,2:15:38.94:838,39,0	1/1:10,0:10:14.56:294,15,0	1/1:3,0:3:4.71:166,5,0	1/1:11,0:11:20.64:464,21,0	1/1:21,2:22:22.52:877,23,0	1/1:8,0:8:5.49:90,5,0	0/0:30,0:30:87.30:0,87,4590	0/0:30,0:30:84.29:0,84,4082	0/0:26,0:26:78.27:0,78,4411	1/1:15,1:16:31.09:659,31,0	1/1:13,1:14:17.44:447,17,0	1/1:21,0:20:25.52:695,26,0	1/1:6,0:6:7.98:187,8,0
chr10	80681221	.	CAAAACA	C	6685.30	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=12.967;DP=482;FS=10.970;HRun=0;HaplotypeScore=175.7869;InbreedingCoeff=0.9469;MQ=70.69;MQ0=4;MQRankSum=-13.840;QD=36.14;ReadPosRankSum=-4.989;VQSLOD=2.6090;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:52.99:0,53,1280	1/1:4,0:4:6.01:65,6,0	0/0:23,0:16:9.78:0,10,659	0/0:40,0:31:71.48:0,71,1350	1/1:21,5:26:62.30:714,62,0	0/0:26,0:25:60.21:0,60,1876	0/0:16,0:16:36.12:0,36,875	1/1:8,4:12:31.99:456,32,0	0/0:23,0:23:66.23:0,66,2054	1/1:15,5:18:47.99:668,48,0	1/1:5,7:12:30.09:494,30,0	0/0:19,0:19:57.20:0,57,1857	0/0:18,0:18:42.14:0,42,1091	0/0:22,0:22:44.99:0,45,1052	1/1:9,6:15:41.05:550,41,0	1/1:6,8:14:37.33:578,37,0	1/1:5,2:7:18.05:268,18,0	1/1:0,2:2:6.02:132,6,0	1/1:5,4:9:26.87:413,27,0	1/1:9,8:16:43.08:683,43,0	1/1:5,1:6:11.92:111,12,0	0/0:32,0:32:87.30:0,87,2752	0/0:28,0:28:78.27:0,78,2411	0/0:27,0:27:81.28:0,81,2792	1/1:8,5:13:32.96:505,33,0	1/1:5,2:7:21.06:343,21,0	1/1:11,6:16:38.78:570,39,0	1/1:0,4:4:7.58:137,8,0
chr10	80681226	.	CA	C	5240.60	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=12.737;DP=491;FS=10.422;HRun=4;HaplotypeScore=143.8538;InbreedingCoeff=0.9520;MQ=67.33;MQ0=3;MQRankSum=-12.340;QD=26.33;ReadPosRankSum=-3.488;VQSLOD=2.3644;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:51.17:0,51,712	1/1:0,2:2:6.02:65,6,0	0/0:16,0:14:35.93:0,36,417	0/0:39,0:30:60.08:0,60,811	1/1:10,15:25:59.71:572,60,0	0/0:27,0:26:66.22:0,66,918	0/0:17,0:17:39.13:0,39,545	1/1:4,10:14:38.12:414,38,0	0/0:23,0:23:69.23:0,69,966	1/1:6,15:19:54.12:582,54,0	1/1:11,4:15:39.10:425,39,0	0/0:20,0:20:60.19:0,60,822	0/0:22,0:22:54.16:0,54,722	0/0:22,0:22:47.95:0,48,666	1/1:8,7:15:38.66:355,39,0	1/1:10,4:14:35.67:327,36,0	1/1:6,4:10:27.07:300,27,0	1/1:2,0:2:6.01:63,6,0	1/1:7,8:15:45.11:487,45,0	1/1:13,5:17:44.86:439,45,0	1/1:4,3:7:12.38:105,12,0	0/0:29,0:29:84.25:0,84,1141	0/0:26,0:26:72.24:0,72,1006	0/0:30,0:30:90.29:0,90,1241	1/1:6,8:14:36.02:382,36,0	1/1:5,3:8:24.01:239,24,0	1/1:7,8:15:42.04:422,42,0	1/1:4,0:4:6.01:63,6,0
chr10	80681334	.	T	TAA	2070.13	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.396;DP=662;FS=17.177;HRun=2;HaplotypeScore=146.0690;InbreedingCoeff=0.9977;MQ=63.53;MQ0=4;MQRankSum=0.790;QD=44.05;ReadPosRankSum=1.071;VQSLOD=2.1652;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,1431	0/0:8,0:8:21.07:0,21,301	0/0:26,0:16:41.88:0,42,538	0/0:22,0:17:39.13:0,39,536	0/0:25,0:25:69.20:0,69,976	1/1:0,24:24:66.23:1236,66,0	1/1:3,20:23:51.17:956,51,0	0/0:36,0:36:99:0,102,1448	0/0:26,0:26:72.24:0,72,1060	0/0:21,0:21:57.19:0,57,839	0/0:18,0:18:42.13:0,42,592	0/0:24,0:24:72.23:0,72,1040	0/0:27,0:27:81.23:0,81,1168	0/0:26,0:26:72.24:0,72,1058	0/0:27,0:27:75.23:0,75,1067	0/0:16,0:16:45.15:0,45,660	0/0:21,0:21:63.21:0,63,922	0/0:17,0:17:51.17:0,51,751	0/0:19,0:19:48.16:0,48,705	0/0:29,0:29:78.25:0,78,1129	0/0:19,0:19:54.17:0,54,775	0/0:26,0:26:75.24:0,75,1085	0/0:28,0:28:75.19:0,75,1021	0/0:30,0:30:87.23:0,87,1221	0/0:18,0:18:51.16:0,51,730	0/0:28,0:28:78.25:0,78,1121	0/0:29,0:28:81.27:0,81,1192	0/0:11,0:11:33.11:0,33,486
chr10	80681683	.	T	TAGAA	18909.49	PASS	AB=0.558;AC=31;AF=0.554;AN=56;BaseQRankSum=17.001;DP=582;FS=1.853;HRun=0;HaplotypeScore=135.4023;InbreedingCoeff=0.9142;MQ=88.70;MQ0=0;MQRankSum=-17.678;QD=61.39;ReadPosRankSum=-2.345;VQSLOD=5.9120;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:45.66:0,46,881	1/1:4,8:12:27.05:666,27,0	0/0:28,0:28:72.10:0,72,1287	0/0:26,0:26:61.06:0,61,1081	1/1:4,27:32:81.28:2052,81,0	0/0:24,0:24:63.22:0,63,1196	0/0:24,0:24:72.25:0,72,1367	1/1:12,15:27:75.19:1819,75,0	0/0:19,0:19:51.17:0,51,959	1/1:3,21:24:69.24:1815,69,0	1/1:10,17:27:48.55:1169,49,0	0/0:19,0:19:51.17:0,51,959	0/0:21,0:21:57.20:0,57,1072	0/0:24,0:24:72.25:0,72,1357	1/1:5,10:15:42.06:928,42,0	0/1:5,19:24:5.80:1233,0,6	1/1:2,6:8:15.05:322,15,0	1/1:1,3:4:3.01:81,3,0	1/1:10,9:20:42.12:1000,42,0	1/1:0,23:24:69.24:1773,69,0	1/1:3,3:6:15.05:404,15,0	0/0:25,0:25:69.22:0,69,1269	0/0:21,0:21:60.19:0,60,1098	0/0:22,0:22:60.21:0,60,1139	1/1:5,18:23:48.16:1252,48,0	1/1:3,22:25:69.24:1732,69,0	1/1:8,19:27:75.21:1855,75,0	1/1:0,10:10:30.10:808,30,0
chr10	80682209	.	GC	G	8375.50	PASS	AB=0.519;AC=29;AF=0.537;AN=54;BaseQRankSum=18.277;DP=534;FS=9.474;HRun=1;HaplotypeScore=176.4926;InbreedingCoeff=0.8944;MQ=86.18;MQ0=0;MQRankSum=-18.417;QD=32.21;ReadPosRankSum=0.800;VQSLOD=3.2634;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.08:0,51,760	1/1:0,10:10:30.10:413,30,0	0/0:17,0:17:48.13:0,48,706	0/0:32,0:32:93.15:0,93,1326	1/1:0,29:29:72.17:957,72,0	0/0:29,0:29:81.28:0,81,1288	0/0:24,0:24:60.20:0,60,952	1/1:1,21:22:42.13:569,42,0	0/0:9,0:9:27.09:0,27,431	1/1:0,21:21:57.15:768,57,0	1/1:0,20:20:48.09:639,48,0	0/0:24,0:24:72.23:0,72,1123	0/0:19,0:19:51.16:0,51,788	0/0:20,0:20:60.20:0,60,956	1/1:1,16:17:39.10:522,39,0	0/1:1,13:14:20.85:307,0,21	1/1:0,8:8:12.04:167,12,0	./.	1/1:1,15:16:24.55:331,25,0	1/1:0,29:29:87.18:1159,87,0	1/1:0,5:5:3.01:42,3,0	0/0:30,0:30:90.29:0,90,1414	0/0:27,0:27:81.28:0,81,1287	0/0:23,0:23:66.22:0,66,1049	1/1:1,23:24:72.17:962,72,0	1/1:0,22:22:57.19:791,57,0	1/1:0,18:18:39.13:543,39,0	1/1:0,5:5:15.05:205,15,0
chr10	80682240	.	C	CA	12704.05	PASS	AB=0.528;AC=39;AF=0.722;AN=54;BaseQRankSum=5.645;DP=568;FS=2.007;HRun=0;HaplotypeScore=161.8927;InbreedingCoeff=0.8741;MQ=89.76;MQ0=0;MQRankSum=-11.761;QD=33.70;ReadPosRankSum=4.226;VQSLOD=4.4608;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:57.19:911,57,0	1/1:3,8:11:21.07:334,21,0	0/0:26,0:26:72.24:0,72,1003	0/0:28,0:28:81.26:0,81,1101	1/1:1,28:29:51.17:812,51,0	1/1:0,30:30:78.27:1247,78,0	1/1:0,21:21:45.15:720,45,0	1/1:4,14:18:36.08:538,36,0	0/0:16,0:16:45.15:0,45,620	1/1:1,18:19:54.18:849,54,0	1/1:2,23:25:45.15:716,45,0	0/0:28,0:28:84.28:0,84,1174	1/1:0,20:20:51.17:815,51,0	1/1:0,22:22:63.21:1007,63,0	1/1:0,17:17:21.07:333,21,0	0/1:2,17:19:14.85:355,0,15	1/1:1,10:11:15.05:239,15,0	1/1:0,1:1:3.01:48,3,0	1/1:0,11:11:18.53:288,19,0	1/1:2,32:34:72.25:1147,72,0	./.	0/0:30,0:30:84.28:0,84,1174	0/0:36,0:36:99:0,105,1465	0/0:25,0:25:75.25:0,75,1046	1/1:0,24:24:66.22:1052,66,0	1/1:0,19:19:42.14:670,42,0	1/1:2,15:17:18.06:287,18,0	1/1:1,7:8:21.07:335,21,0
chr10	80682906	.	TTAAGTATTCGA	T	21435.79	PASS	AC=30;AF=0.556;AN=54;BaseQRankSum=17.217;DP=495;FS=3.024;HRun=0;HaplotypeScore=201.5937;InbreedingCoeff=0.9920;MQ=83.32;MQ0=0;MQRankSum=-16.415;QD=88.58;ReadPosRankSum=2.770;VQSLOD=4.8492;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.23:0,72,4077	1/1:0,11:11:30.10:1116,30,0	0/0:19,0:19:50.32:0,50,2494	0/0:19,0:19:51.15:0,51,2554	1/1:0,17:17:45.15:1668,45,0	0/0:28,0:28:81.21:0,81,3805	0/0:15,0:15:45.15:0,45,2581	1/1:0,29:29:87.07:2632,87,0	0/0:21,0:21:63.13:0,63,3047	1/1:0,20:20:51.12:1743,51,0	1/1:0,18:18:42.06:1407,42,0	0/0:13,0:13:39.12:0,39,2125	0/0:29,0:29:84.29:0,84,4737	0/0:26,0:26:78.26:0,78,4171	1/1:0,11:11:21.07:778,21,0	1/1:0,18:18:45.15:1672,45,0	1/1:0,9:9:12.04:446,12,0	./.	1/1:0,13:13:39.02:1095,39,0	1/1:0,22:22:54.12:1914,54,0	1/1:0,9:9:21.07:735,21,0	0/0:17,0:17:48.15:0,48,2285	0/0:23,0:23:69.21:0,69,3625	0/0:19,0:19:57.18:0,57,3076	1/1:0,12:12:33.11:1220,33,0	1/1:0,27:27:81.28:2891,81,0	1/1:0,21:21:41.66:1562,42,0	1/1:0,5:5:15.05:558,15,0
chr10	80683075	.	CA	C	441.56	PASS	AB=0.837;AC=12;AF=0.214;AN=56;BaseQRankSum=-5.654;DP=503;FS=7.992;HRun=15;HaplotypeScore=133.6183;InbreedingCoeff=0.4206;MQ=61.56;MQ0=6;MQRankSum=6.694;QD=2.74;ReadPosRankSum=5.474;VQSLOD=-0.2322;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:14:16.27:47,16,0	0/0:3,0:9:22.79:0,23,110	0/1:24,0:9:1.38:1,0,33	0/1:24,0:12:3.12:3,0,59	0/0:23,0:30:36.01:0,36,192	0/1:14,20:34:17.21:268,0,17	0/1:4,10:14:29.01:91,0,29	0/0:18,0:17:23.09:0,23,130	0/0:14,1:15:12.93:0,13,221	0/0:21,0:27:54.81:0,55,312	0/0:17,0:23:32.02:0,32,164	0/1:9,2:11:29.58:30,0,129	1/1:4,1:13:12.79:48,13,0	1/1:6,0:19:33.47:107,33,0	0/0:9,0:11:25.86:0,26,139	0/0:7,0:12:22.10:0,22,106	0/0:10,0:11:16.99:0,17,88	0/1:5,0:5:2.24:2,0,27	0/0:11,0:10:11.45:0,11,65	0/0:30,0:37:71.63:0,72,365	0/0:9,0:11:17.17:0,17,88	0/0:14,0:16:38.78:0,39,320	0/0:27,1:31:39.67:0,40,479	0/0:8,0:8:18:0,18,158	0/0:14,0:15:28.30:0,28,137	0/0:16,0:18:29.27:0,29,160	0/0:23,0:24:34.11:0,34,185	0/0:10,0:9:20.31:0,20,117
chr10	80683102	.	G	GA	5514.14	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=3.838;DP=507;FS=5.074;HRun=8;HaplotypeScore=91.2830;InbreedingCoeff=0.9274;MQ=63.69;MQ0=8;MQRankSum=-5.742;QD=18.63;ReadPosRankSum=-1.001;VQSLOD=4.2752;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:27:0,27,247	1/1:6,8:14:18.05:208,18,0	0/1:31,0:13:2.27:2,0,97	0/0:35,1:18:34.71:0,35,258	1/1:7,22:29:63.08:704,63,0	0/0:26,0:26:63.03:0,63,576	0/0:21,0:21:48.02:0,48,439	1/1:5,24:27:63.19:727,63,0	0/0:18,0:18:42.01:0,42,383	1/1:6,10:16:33.06:366,33,0	1/1:8,12:20:30.09:341,30,0	0/0:12,0:12:30:0,30,274	0/0:13,0:13:27.01:0,27,247	0/0:19,0:19:48:0,48,433	1/1:3,9:12:24.07:277,24,0	1/1:5,7:12:18.05:208,18,0	1/1:4,10:14:24.07:277,24,0	1/1:4,3:7:6.49:70,6,0	1/1:4,9:12:27.55:312,28,0	1/1:12,21:32:61.12:695,61,0	1/1:1,4:5:9.03:104,9,0	0/0:14,0:14:33.01:0,33,302	0/0:24,0:24:60:0,60,545	0/0:11,0:11:27.01:0,27,246	1/1:5,14:19:33.10:381,33,0	1/1:9,9:18:36.04:388,36,0	1/1:9,9:18:23.36:247,23,0	1/1:1,5:6:18.05:208,18,0
chr10	80683214	.	GA	G	8123.94	PASS	AB=0.776;AC=36;AF=0.643;AN=56;BaseQRankSum=10.945;DP=615;FS=2.001;HRun=10;HaplotypeScore=83.2284;InbreedingCoeff=0.8538;MQ=74.99;MQ0=2;MQRankSum=-3.182;QD=18.63;ReadPosRankSum=1.255;VQSLOD=5.5230;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:13.22:0,13,371	1/1:1,11:12:26.99:234,27,0	0/0:18,0:16:35.96:0,36,342	0/1:18,0:17:6.44:6,0,144	1/1:2,27:29:71.96:624,72,0	1/1:2,0:35:57.03:168,57,0	1/1:0,0:11:22.41:66,22,0	1/1:5,28:32:80.93:692,81,0	0/0:20,0:21:50.96:0,51,536	1/1:4,24:28:77.98:676,78,0	1/1:2,29:31:83.97:725,84,0	0/0:16,0:16:19.49:0,19,439	0/0:22,0:22:57.15:0,57,631	0/0:24,0:24:66.18:0,66,730	1/1:3,19:21:53.98:469,54,0	1/1:5,18:23:50.98:443,51,0	1/1:0,22:22:53.99:469,54,0	1/1:2,15:17:38.99:339,39,0	1/1:3,12:15:32.98:286,33,0	1/1:4,31:35:89.95:781,90,0	0/1:3,13:16:24.37:270,0,24	0/0:31,0:32:75.02:0,75,802	0/0:22,0:23:56.95:0,57,595	0/0:9,0:9:21.04:0,21,222	1/1:2,19:21:47.98:417,48,0	1/1:5,19:24:34.42:446,34,0	1/1:1,29:30:80.98:703,81,0	1/1:1,13:14:35.98:312,36,0
chr10	80683315	.	CA	C	11362.92	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=16.310;DP=661;FS=0.612;HRun=4;HaplotypeScore=153.8471;InbreedingCoeff=0.9907;MQ=76.66;MQ0=0;MQRankSum=-3.509;QD=31.22;ReadPosRankSum=1.377;VQSLOD=3.1678;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.26:0,78,1091	1/1:0,12:12:36.11:431,36,0	0/0:18,0:18:51.17:0,51,702	0/0:18,0:18:17.84:0,18,585	1/1:1,33:34:93.28:1114,93,0	0/0:33,0:32:99:0,99,1385	0/0:16,0:16:45.12:0,45,594	1/1:5,29:34:87.26:1042,87,0	0/0:24,0:24:72.21:0,72,974	1/1:0,28:28:84.22:982,84,0	1/1:1,23:24:57.17:680,57,0	0/0:25,0:25:72.18:0,72,969	0/0:30,0:30:87.27:0,87,1176	0/0:29,0:29:81.27:0,81,1134	1/1:1,25:26:69.21:826,69,0	1/1:2,23:25:63.19:755,63,0	1/1:0,19:19:57.17:683,57,0	1/1:1,3:4:9.03:108,9,0	1/1:2,16:18:45.11:516,45,0	1/1:2,30:32:84.26:1006,84,0	1/1:1,20:21:45.14:537,45,0	0/0:28,0:28:81.24:0,81,1111	0/0:32,0:32:96.30:0,96,1312	0/0:18,0:18:54.14:0,54,734	1/1:2,14:16:42.13:504,42,0	1/1:4,27:31:78.22:922,78,0	1/1:2,26:28:72.22:860,72,0	1/1:1,11:12:33.10:396,33,0
chr10	80684773	.	ATGT	A	16527.03	PASS	AB=0.556;AC=41;AF=0.732;AN=56;BaseQRankSum=14.838;DP=559;FS=2.150;HRun=0;HaplotypeScore=149.6009;InbreedingCoeff=0.9071;MQ=67.74;MQ0=0;MQRankSum=-6.810;QD=37.91;ReadPosRankSum=1.896;VQSLOD=5.7865;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:30:75.25:1082,75,0	1/1:1,9:10:30.10:453,30,0	0/0:9,0:9:27.09:0,27,608	0/0:7,0:7:21.07:0,21,444	1/1:1,29:30:84.05:1106,84,0	1/1:2,18:20:60.10:788,60,0	1/1:2,9:11:33.08:384,33,0	1/1:8,23:31:66.19:959,66,0	0/0:23,0:23:69.24:0,69,1607	1/1:1,21:23:66.22:979,66,0	1/1:6,23:29:75.14:1029,75,0	0/0:13,0:13:39.13:0,39,919	1/1:2,12:14:39.11:520,39,0	1/1:2,20:22:66.21:925,66,0	1/1:1,15:16:48.06:679,48,0	0/1:3,12:15:25.82:567,0,26	1/1:3,22:25:68.83:923,69,0	1/1:1,9:10:30.09:414,30,0	1/1:4,11:15:39.13:567,39,0	1/1:4,35:39:99:1610,111,0	1/1:2,19:21:50.93:721,51,0	0/0:25,0:25:75.26:0,75,1766	0/0:37,0:37:99:0,111,2522	0/0:9,0:9:27.09:0,27,626	1/1:5,19:24:60.18:818,60,0	1/1:3,14:17:42.14:659,42,0	1/1:3,24:27:72.23:1033,72,0	1/1:0,7:7:21.07:310,21,0
chr10	80684779	.	A	AT	13778.02	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=15.185;DP=560;FS=5.863;HRun=3;HaplotypeScore=141.9597;InbreedingCoeff=0.9926;MQ=71.69;MQ0=0;MQRankSum=-6.779;QD=31.82;ReadPosRankSum=1.968;VQSLOD=3.6622;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:31:81.20:958,81,0	1/1:0,9:9:27.08:333,27,0	0/0:13,0:13:35.32:0,35,415	0/0:8,0:8:21.07:0,21,265	1/1:2,26:28:69.13:800,69,0	1/1:1,18:19:54.08:578,54,0	1/1:3,9:12:36.01:351,36,0	1/1:8,23:31:93.02:930,93,0	0/0:22,0:22:66.21:0,66,856	1/1:2,20:22:63.15:758,63,0	1/1:3,24:27:76.70:876,77,0	0/0:13,0:13:33.11:0,33,428	1/1:2,12:14:37.61:402,38,0	1/1:2,20:22:63.10:711,63,0	1/1:1,15:16:45.13:561,45,0	1/1:6,12:18:12.17:528,12,0	1/1:3,22:25:60.07:679,60,0	1/1:2,9:11:33.05:363,33,0	1/1:3,12:15:39.10:461,39,0	1/1:4,35:38:99:1354,114,0	1/1:3,19:22:58.02:685,58,0	0/0:28,0:28:84.25:0,84,1063	0/0:34,0:34:99:0,102,1310	0/0:9,0:9:27.09:0,27,351	1/1:1,19:20:60.10:669,60,0	1/1:2,14:16:24.67:527,25,0	1/1:4,24:27:81.17:963,81,0	1/1:1,7:8:24.06:291,24,0
chr10	80685106	.	T	TA	15408.45	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-2.130;DP=592;FS=2.593;HRun=4;HaplotypeScore=85.4058;InbreedingCoeff=0.9780;MQ=86.77;MQ0=0;MQRankSum=-7.860;QD=35.10;ReadPosRankSum=2.420;VQSLOD=5.2807;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,39:41:99:1526,117,0	1/1:0,5:5:15.05:205,15,0	0/0:28,0:27:75.68:0,76,761	0/0:26,0:26:56.90:0,57,615	1/1:3,23:26:60.20:815,60,0	1/1:3,18:21:51.17:696,51,0	1/1:2,18:20:45.15:615,45,0	1/1:3,28:31:84.18:1072,84,0	0/0:23,0:23:66.19:0,66,748	1/1:1,22:23:66.22:902,66,0	1/1:2,16:18:45.15:611,45,0	0/0:19,0:19:54.15:0,54,612	1/1:2,22:24:63.21:859,63,0	1/1:0,16:16:45.14:598,45,0	1/1:0,32:32:87.25:1166,87,0	1/1:1,23:24:60.20:819,60,0	1/1:0,15:15:42.14:573,42,0	1/1:1,18:19:57.19:778,57,0	1/1:3,17:20:51.14:678,51,0	1/1:2,23:25:66.18:881,66,0	1/1:2,12:13:27.05:347,27,0	0/0:16,0:16:45.06:0,45,494	0/0:18,0:18:42.12:0,42,476	0/0:23,0:23:69.16:0,69,768	1/1:1,15:16:36.12:482,36,0	1/1:1,17:18:51.17:696,51,0	1/1:3,26:29:75.25:1022,75,0	1/1:0,2:2:6.01:66,6,0
chr10	80685612	.	G	GT	12515.20	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-10.933;DP=489;FS=10.269;HRun=6;HaplotypeScore=42.6073;InbreedingCoeff=0.9974;MQ=79.92;MQ0=0;MQRankSum=-3.851;QD=32.17;ReadPosRankSum=0.555;VQSLOD=4.5071;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:84.27:1055,84,0	1/1:0,10:10:30.10:377,30,0	0/0:16,0:16:39.03:0,39,379	0/0:8,0:7:18:0,18,172	1/1:2,13:15:33.06:397,33,0	1/1:2,15:17:45.14:566,45,0	1/1:1,25:26:63.20:793,63,0	1/1:2,29:31:81.25:1005,81,0	0/0:26,0:26:66.14:0,66,673	1/1:2,11:13:33.10:403,33,0	1/1:0,11:11:30.05:360,30,0	0/0:11,0:11:30.05:0,30,299	1/1:0,20:20:54.17:679,54,0	1/1:0,13:13:33.11:415,33,0	1/1:1,16:17:48.15:604,48,0	1/1:2,21:23:60.19:755,60,0	1/1:2,29:32:90.12:1109,90,0	1/1:2,20:22:54.17:679,54,0	1/1:3,10:13:30.10:377,30,0	1/1:0,12:12:36.12:453,36,0	1/1:1,12:13:30.10:377,30,0	0/0:9,0:9:27.06:0,27,275	0/0:10,0:10:30.05:0,30,299	0/0:20,0:20:60.14:0,60,612	1/1:2,11:13:27.09:340,27,0	1/1:0,15:15:45.14:566,45,0	1/1:7,14:21:36.11:450,36,0	1/1:0,21:21:60.19:755,60,0
chr10	80686658	.	A	AGATCCAC	40343.30	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-8.621;DP=638;FS=3.515;HRun=0;HaplotypeScore=125.3020;InbreedingCoeff=0.9777;MQ=80.80;MQ0=0;MQRankSum=-17.282;QD=86.76;ReadPosRankSum=3.103;VQSLOD=5.7769;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,10:16:27.09:1100,27,0	1/1:0,6:10:18.06:734,18,0	0/0:27,0:27:78.25:0,78,2024	0/0:24,0:24:59.11:0,59,1467	1/1:3,20:27:48.16:1952,48,0	1/1:9,19:31:60.21:2289,60,0	1/1:6,8:18:30.10:1209,30,0	1/1:9,14:33:96.28:3231,96,0	0/0:25,0:25:69.20:0,69,1688	1/1:6,21:31:81.28:3209,81,0	1/1:3,16:24:48.10:1849,48,0	0/0:23,0:23:66.18:0,66,1611	1/1:5,23:32:90.31:3572,90,0	1/1:1,12:19:36.12:1395,36,0	1/1:2,21:27:57.20:2322,57,0	1/1:4,19:27:66.23:2512,66,0	1/1:2,10:17:27.09:1101,27,0	1/1:0,6:6:18.06:735,18,0	1/1:9,5:16:39.13:1418,39,0	1/1:4,17:28:54.19:2105,54,0	1/1:2,2:6:6.02:244,6,0	0/0:26,0:26:78.25:0,78,1960	0/0:27,0:27:78.24:0,78,1910	0/0:21,0:21:54.18:0,54,1404	1/1:3,22:26:60.21:2418,60,0	1/1:4,14:22:57.20:2196,57,0	1/1:1,28:35:84.29:3407,84,0	1/1:0,12:14:33.11:1347,33,0
chr10	80686910	.	G	GT	19981.17	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-9.916;DP=646;FS=11.764;HRun=1;HaplotypeScore=66.8403;InbreedingCoeff=0.9992;MQ=89.83;MQ0=0;MQRankSum=-7.255;QD=40.28;ReadPosRankSum=2.197;VQSLOD=4.7358;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:84.28:1259,84,0	1/1:0,13:13:39.13:584,39,0	0/0:25,0:25:72.20:0,72,905	0/0:25,0:25:60.18:0,60,740	1/1:0,25:25:72.11:1004,72,0	1/1:0,31:31:81.23:1189,81,0	1/1:1,15:16:45.15:675,45,0	1/1:2,31:33:93.32:1393,93,0	0/0:20,0:20:57.19:0,57,740	1/1:0,20:20:60.20:899,60,0	1/1:0,22:22:63.21:943,63,0	0/0:20,0:20:60.20:0,60,779	1/1:1,29:30:75.25:1124,75,0	1/1:0,29:29:81.27:1214,81,0	1/1:0,26:26:72.24:1079,72,0	1/1:0,17:17:45.15:675,45,0	1/1:1,22:23:51.07:764,51,0	1/1:1,9:10:20.96:396,21,0	1/1:0,23:23:69.22:1014,69,0	1/1:0,30:30:87.25:1279,87,0	1/1:1,21:22:54.18:809,54,0	0/0:19,0:19:54.16:0,54,688	0/0:20,0:20:54.14:0,54,670	0/0:21,0:21:63.19:0,63,802	1/1:1,34:35:90.22:1299,90,0	1/1:1,23:24:69.70:1035,70,0	1/1:5,19:24:50.90:764,51,0	1/1:0,13:13:39.13:584,39,0
chr10	80687922	.	ACCCGG	A	14834.36	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=16.722;DP=456;FS=10.231;HRun=0;HaplotypeScore=237.7427;InbreedingCoeff=0.9658;MQ=85.66;MQ0=0;MQRankSum=-16.280;QD=46.94;ReadPosRankSum=4.207;VQSLOD=3.4132;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:12:30.10:493,30,0	1/1:0,6:6:18.06:300,18,0	0/0:20,0:20:60.17:0,60,1622	0/0:23,0:23:60.18:0,60,1708	1/1:0,24:24:54.18:882,54,0	1/1:1,28:28:84.27:1370,84,0	1/1:1,11:12:33.11:542,33,0	1/1:0,21:21:60.21:1036,60,0	0/0:17,0:17:51.16:0,51,1517	1/1:0,12:12:33.11:573,33,0	1/1:0,13:13:39.13:630,39,0	0/0:26,0:26:78.27:0,78,2596	1/1:1,24:25:75.24:1211,75,0	1/1:0,17:17:51.17:816,51,0	1/1:0,16:16:48.16:788,48,0	1/1:0,22:22:66.23:1100,66,0	1/1:0,6:6:18.06:297,18,0	1/1:0,5:5:15.05:226,15,0	1/1:0,11:11:33.11:579,33,0	1/1:0,17:17:51.17:846,51,0	1/1:0,6:6:9.46:144,9,0	0/0:24,0:24:69.24:0,69,2244	0/0:13,0:13:39.13:0,39,1216	0/0:17,0:17:51.18:0,51,1697	1/1:0,16:16:42.14:692,42,0	1/1:0,23:23:69.24:1177,69,0	1/1:0,20:21:63.21:1032,63,0	1/1:0,2:2:6.02:98,6,0
chr10	80687928	.	TC	T	6651.75	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=16.492;DP=451;FS=5.427;HRun=1;HaplotypeScore=231.8821;InbreedingCoeff=0.9641;MQ=82.75;MQ0=0;MQRankSum=-15.969;QD=20.92;ReadPosRankSum=3.731;VQSLOD=4.7189;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,11:13:32.78:237,33,0	1/1:0,6:6:17.90:133,18,0	0/0:17,0:17:51.17:0,51,780	0/0:22,0:22:59.77:0,60,824	1/1:0,24:24:53.59:380,54,0	1/1:1,28:28:83.53:615,84,0	1/1:0,11:11:32.77:235,33,0	1/1:0,21:21:59.86:478,60,0	0/0:15,0:15:45.15:0,45,719	1/1:0,12:12:32.93:266,33,0	1/1:1,13:14:41.61:292,42,0	0/0:27,0:27:81.28:0,81,1295	1/1:0,24:24:71.53:518,72,0	1/1:0,17:17:49.43:342,49,0	1/1:1,16:17:50.64:367,51,0	1/1:0,22:22:65.65:487,66,0	1/1:0,6:6:17.88:130,18,0	1/1:0,5:5:14.81:100,15,0	1/1:1,11:12:35.96:312,36,0	1/1:0,17:17:50.70:372,51,0	1/1:0,6:6:8.89:61,9,0	0/0:23,0:23:66.23:0,66,1055	0/0:12,0:12:36.12:0,36,576	0/0:17,0:17:51.13:0,51,787	1/1:0,16:16:41.71:302,42,0	1/1:0,23:23:68.77:535,69,0	1/1:1,20:21:61.87:447,62,0	1/1:0,2:2:5.94:42,6,0
chr10	80687965	.	CCAA	C	17230.05	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=13.425;DP=520;FS=2.298;HRun=0;HaplotypeScore=196.1876;InbreedingCoeff=0.9728;MQ=73.52;MQ0=0;MQRankSum=-13.219;QD=43.40;ReadPosRankSum=-0.178;VQSLOD=5.5696;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:16:21.07:501,21,0	1/1:0,4:4:9.03:153,9,0	0/0:9,0:9:24.08:0,24,434	0/0:27,0:27:59.81:0,60,1191	1/1:3,26:29:78.27:1325,78,0	1/1:4,28:32:69.24:1175,69,0	1/1:1,18:19:51.17:868,51,0	1/1:4,27:31:78.25:1298,78,0	0/0:14,0:14:42.14:0,42,969	1/1:1,20:21:54.14:892,54,0	1/1:3,11:14:30.10:509,30,0	0/0:23,0:23:66.23:0,66,1520	1/1:3,25:28:69.24:1171,69,0	1/1:1,20:21:60.21:1021,60,0	1/1:1,21:22:60.21:1022,60,0	1/1:2,19:21:57.20:970,57,0	1/1:1,9:10:21.07:358,21,0	1/1:1,7:8:18.06:307,18,0	1/1:0,17:17:48.15:791,48,0	1/1:1,17:18:51.13:835,51,0	1/1:0,6:6:15.05:255,15,0	0/0:22,0:22:58.85:0,59,1379	0/0:11,0:11:33.10:0,33,708	0/0:17,0:16:51.18:0,51,1159	1/1:0,20:20:60.21:1021,60,0	1/1:1,26:27:78.27:1325,78,0	1/1:3,27:30:75.26:1278,75,0	1/1:0,3:3:9.03:153,9,0
chr10	80688117	.	A	AT	15916.08	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=7.155;DP=528;FS=0.833;HRun=1;HaplotypeScore=91.3070;InbreedingCoeff=0.9987;MQ=65.35;MQ0=0;MQRankSum=-3.222;QD=37.81;ReadPosRankSum=1.178;VQSLOD=5.2089;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:48.16:708,48,0	1/1:0,8:8:24.08:359,24,0	0/0:10,0:10:30.09:0,30,361	0/0:9,0:9:26.76:0,27,288	1/1:2,28:30:81.19:1175,81,0	1/1:4,26:30:81.12:1001,81,0	1/1:6,6:12:30:342,30,0	1/1:1,25:26:75.17:1027,75,0	0/0:13,0:13:39.13:0,39,505	1/1:0,21:21:63.20:923,63,0	1/1:1,21:22:57.15:827,57,0	0/0:17,0:17:51.15:0,51,647	1/1:2,19:21:51.10:725,51,0	1/1:0,25:25:63.21:931,63,0	1/1:1,22:23:60.20:898,60,0	1/1:0,14:14:39.13:573,39,0	1/1:1,14:15:33.11:494,33,0	1/1:1,15:16:42.03:598,42,0	1/1:1,22:24:69.21:976,69,0	1/1:0,19:19:54.11:781,54,0	1/1:0,13:13:33.11:494,33,0	0/0:20,0:20:57.18:0,57,728	0/0:23,0:23:66.19:0,66,830	0/0:15,0:15:45.14:0,45,570	1/1:1,23:24:60.20:898,60,0	1/1:4,23:27:72.21:1020,72,0	1/1:0,21:21:54.18:807,54,0	1/1:1,9:10:24.08:359,24,0
chr10	80688720	.	GA	G	708.11	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=7.853;DP=530;FS=1.474;HRun=9;HaplotypeScore=51.0297;InbreedingCoeff=0.7543;MQ=66.60;MQ0=0;MQRankSum=0.764;QD=17.27;ReadPosRankSum=-0.891;VQSLOD=3.3726;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.10:0,42,466	0/0:8,0:8:21.06:0,21,242	0/1:4,0:4:12.57:13,0,51	0/0:5,1:6:10.56:0,11,131	0/0:27,0:27:78.05:0,78,858	1/1:3,14:17:39.02:357,39,0	1/1:1,19:20:51.03:467,51,0	0/0:28,0:28:72.19:0,72,823	0/0:24,0:24:69.18:0,69,777	0/0:25,0:25:66.19:0,66,752	0/0:26,0:26:69.17:0,69,768	0/0:14,0:14:39.12:0,39,450	0/0:17,0:17:48.09:0,48,529	0/0:15,0:15:33.10:0,33,380	0/0:15,0:16:44.97:0,45,499	0/0:26,0:26:69.20:0,69,788	0/0:26,0:26:69.20:0,69,796	0/0:4,0:4:9.03:0,9,104	0/0:17,0:17:45.09:0,45,495	0/0:25,0:25:63.14:0,63,704	0/0:18,0:18:48.13:0,48,545	0/0:20,0:20:57.17:0,57,658	0/0:29,0:29:75.21:0,75,857	0/0:22,0:22:63.13:0,63,701	0/0:26,0:25:44.81:0,45,769	0/0:13,0:13:39.10:0,39,441	0/0:30,0:30:78.23:0,78,900	0/0:12,0:12:36.09:0,36,405
chr10	80689532	.	TGCACAC	T	2661.55	PASS	AB=0.939;AC=33;AF=0.611;AN=54;BaseQRankSum=13.987;DP=542;FS=6.953;HRun=0;HaplotypeScore=154.3086;InbreedingCoeff=0.3361;MQ=68.39;MQ0=5;MQRankSum=-9.289;QD=7.67;ReadPosRankSum=2.864;VQSLOD=2.1611;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:9.36:74,9,0	1/1:9,0:9:23.59:159,24,0	0/0:34,0:25:72.03:0,72,2101	0/0:39,0:31:69.57:0,70,2261	1/1:21,0:21:5.67:64,6,0	0/1:31,0:31:31.94:121,0,32	0/1:22,0:22:11.36:11,0,41	0/1:30,0:30:64.42:406,0,64	0/0:24,0:24:57.17:0,57,1748	0/1:14,0:13:5.30:165,0,5	1/1:13,0:13:2.46:41,2,0	0/0:21,0:21:63.22:0,63,1891	0/1:23,0:23:18.17:221,0,18	1/1:18,0:18:6.02:95,6,0	1/1:28,0:28:3.41:137,3,0	1/1:23,0:24:18.06:251,18,0	1/1:8,0:8:20.77:148,21,0	1/1:5,0:5:11.85:79,12,0	0/1:5,8:13:33.08:195,0,33	1/1:14,0:14:5.97:71,6,0	./.	0/0:21,0:21:60.18:0,60,1791	0/0:18,0:18:54.15:0,54,1510	0/0:26,0:26:72.23:0,72,2206	1/1:15,0:15:11.20:81,11,0	1/1:16,0:16:1.77:242,2,0	0/1:19,1:20:34.89:229,0,35	1/1:4,0:4:8.87:57,9,0
chr10	80689533	.	GCACACA	G	6309.64	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=14.841;DP=543;FS=14.685;HRun=0;HaplotypeScore=142.2887;InbreedingCoeff=0.8729;MQ=66.52;MQ0=5;MQRankSum=-11.306;QD=17.58;ReadPosRankSum=-2.511;VQSLOD=3.1604;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:35.53:310,36,0	1/1:9,0:9:23.94:287,24,0	0/0:33,0:24:55.13:0,55,1694	0/0:38,0:30:69.54:0,70,1886	1/1:22,0:22:11.80:108,12,0	1/1:30,0:30:12.04:213,12,0	1/1:22,0:22:3.01:38,3,0	1/1:5,24:29:72.23:1007,72,0	0/0:24,0:24:51.18:0,51,1367	1/1:13,0:12:30.10:399,30,0	1/1:13,0:13:8.86:89,9,0	0/0:22,0:22:66.18:0,66,1512	1/1:23,0:23:50.95:571,51,0	1/1:18,0:18:6.02:110,6,0	1/1:28,0:28:62.15:519,62,0	1/1:25,0:25:17.80:288,18,0	1/1:8,0:8:21.07:296,21,0	1/1:5,0:5:12.04:157,12,0	1/1:14,0:14:23.27:364,23,0	1/1:14,0:14:8.96:110,9,0	1/1:12,0:11:2.96:19,3,0	0/0:21,0:21:54.19:0,54,1351	0/0:19,0:19:48.12:0,48,1120	0/0:27,0:27:69.24:0,69,1711	1/1:15,0:15:29.62:275,30,0	1/1:17,0:17:36.12:513,36,0	1/1:20,0:20:44.86:522,45,0	1/1:4,0:4:9.03:114,9,0
chr10	80689536	.	CACACACAGAG	C	6782.08	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=14.435;DP=532;FS=16.935;HRun=0;HaplotypeScore=163.5655;InbreedingCoeff=0.8720;MQ=61.81;MQ0=5;MQRankSum=-10.995;QD=19.54;ReadPosRankSum=-1.935;VQSLOD=2.8724;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:35.53:310,36,0	1/1:7,1:9:24.01:361,24,0	0/0:31,0:22:55.14:0,55,1694	0/0:34,0:26:69.54:0,70,1885	1/1:4,19:23:11.80:153,12,0	1/1:0,0:31:12.04:319,12,0	1/1:2,0:22:3.01:60,3,0	1/1:29,0:29:72.23:1007,72,0	0/0:26,0:26:55.07:0,55,1668	1/1:13,0:12:30.10:399,30,0	1/1:3,0:11:8.86:117,9,0	0/0:27,0:27:74.79:0,75,1907	1/1:23,0:23:50.95:571,51,0	1/1:2,14:17:6.02:183,6,0	1/1:24,0:25:62.15:547,62,0	1/1:8,15:24:17.80:499,18,0	1/1:7,0:7:21.06:273,21,0	1/1:5,0:5:12.04:157,12,0	1/1:14,0:14:20.26:304,20,0	1/1:0,0:13:8.96:104,9,0	1/1:2,0:10:2.96:19,3,0	0/0:21,0:21:54.19:0,54,1437	0/0:18,0:18:48.12:0,48,1263	0/0:28,0:28:69.24:0,69,1853	1/1:15,0:15:21.21:171,21,0	1/1:0,16:16:39.07:624,39,0	1/1:18,0:18:44.85:489,45,0	1/1:3,0:3:9.03:114,9,0
chr10	80689728	.	A	AG	16655.63	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=9.420;DP=620;FS=1.027;HRun=0;HaplotypeScore=89.2429;InbreedingCoeff=0.9993;MQ=77.76;MQ0=0;MQRankSum=-6.369;QD=39.56;ReadPosRankSum=2.451;VQSLOD=5.3537;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:30:86.60:1226,87,0	1/1:0,7:7:21.07:313,21,0	0/0:21,0:21:60.43:0,60,762	0/0:29,0:27:58.73:0,59,776	1/1:0,34:34:84.21:1211,84,0	0/0:24,0:24:72.22:0,72,972	0/0:21,0:21:57.18:0,57,781	1/1:0,24:24:72.16:1027,72,0	0/0:22,0:22:63.15:0,63,841	1/1:0,22:22:66.17:955,66,0	1/1:0,19:19:57.11:825,57,0	0/0:18,0:18:51.14:0,51,667	1/1:0,24:24:63.21:938,63,0	1/1:0,19:19:51.17:762,51,0	1/1:0,19:19:54.18:805,54,0	1/1:0,23:23:60.20:896,60,0	1/1:0,22:22:54.11:780,54,0	1/1:2,14:16:48.07:666,48,0	1/1:0,24:24:69.17:967,69,0	1/1:0,24:24:60.08:842,60,0	1/1:0,15:15:36.12:539,36,0	0/0:25,0:25:75.24:0,75,1018	0/0:23,0:23:69.19:0,69,921	0/0:16,0:16:48.14:0,48,637	1/1:1,17:18:48.16:707,48,0	1/1:1,19:20:54.13:779,54,0	1/1:1,33:34:87.29:1298,87,0	1/1:2,25:27:75.25:1119,75,0
chr10	80691368	.	CA	C	5433.30	PASS	AB=0.591;AC=19;AF=0.352;AN=54;BaseQRankSum=11.984;DP=589;FS=2.298;HRun=9;HaplotypeScore=61.7384;InbreedingCoeff=0.8904;MQ=82.19;MQ0=0;MQRankSum=0.496;QD=22.73;ReadPosRankSum=0.228;VQSLOD=5.6414;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:57.03:522,57,0	0/0:10,0:10:30.08:0,30,338	0/0:17,1:18:8.52:0,9,331	0/0:19,0:19:42.11:0,42,466	0/0:26,0:26:75.21:0,75,856	1/1:1,20:21:57.03:522,57,0	0/1:4,9:13:36.22:214,0,36	1/1:4,21:25:63:566,63,0	0/0:22,0:22:66.18:0,66,752	0/0:35,1:36:71.84:0,72,1081	0/0:20,0:20:57.17:0,57,658	0/0:14,0:14:42.12:0,42,485	1/1:1,30:31:81.04:741,81,0	1/1:3,21:24:51.01:467,51,0	0/0:29,0:30:84.08:0,84,949	0/0:24,0:24:63.18:0,63,718	0/0:16,1:18:23.52:0,24,506	0/0:16,0:16:42.10:0,42,472	1/1:1,16:17:47.99:432,48,0	1/1:3,29:32:72.01:659,72,0	1/1:1,13:14:33.02:302,33,0	0/0:19,2:21:5.38:0,5,568	0/0:22,0:22:63.19:0,63,727	0/0:7,0:7:21.06:0,21,242	0/0:19,0:19:57.16:0,57,649	0/0:27,1:28:44.75:0,45,769	1/1:3,39:42:82.45:1009,82,0	./.
chr10	80691652	.	A	ATACCC	35582.85	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-14.727;DP=597;FS=1.916;HRun=0;HaplotypeScore=90.4533;InbreedingCoeff=0.9899;MQ=78.39;MQ0=0;MQRankSum=-12.612;QD=86.79;ReadPosRankSum=3.748;VQSLOD=7.2259;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:21:54.18:1719,54,0	1/1:0,9:9:27.09:889,27,0	0/0:23,0:23:65.71:0,66,1335	0/0:13,0:13:36.09:0,36,679	1/1:3,23:30:66.22:2159,66,0	0/0:29,0:29:87.30:0,87,2009	0/0:15,0:15:42.13:0,42,879	1/1:9,25:35:99:3145,102,0	0/0:21,0:21:63.21:0,63,1424	1/1:1,27:29:87.28:2786,87,0	1/1:1,31:32:93.32:3042,93,0	0/0:18,0:18:51.18:0,51,1174	1/1:5,20:25:72.25:2272,72,0	1/1:2,23:28:72.25:2305,72,0	1/1:0,21:24:63.22:2067,63,0	1/1:2,16:18:54.18:1719,54,0	1/1:0,7:8:21.07:691,21,0	1/1:5,15:21:57.19:1724,57,0	1/1:2,9:10:30.07:846,30,0	1/1:3,36:39:99:3417,105,0	1/1:0,10:10:27.09:889,27,0	0/0:23,0:23:66.22:0,66,1466	0/0:33,0:33:99:0,99,2275	0/0:12,0:12:36.07:0,36,742	1/1:2,15:17:45.15:1480,45,0	1/1:0,13:18:54.16:1478,54,0	1/1:1,26:30:81.28:2662,81,0	1/1:0,3:3:9.03:296,9,0
chr10	80691820	.	C	CG	23219.47	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-12.198;DP=721;FS=0.000;HRun=1;HaplotypeScore=67.5080;InbreedingCoeff=0.9943;MQ=64.76;MQ0=0;MQRankSum=-3.277;QD=40.81;ReadPosRankSum=1.187;VQSLOD=5.3482;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:81.19:1161,81,0	1/1:1,12:13:33.11:494,33,0	0/0:20,0:18:51.13:0,51,644	0/0:29,0:27:65.83:0,66,822	1/1:0,28:28:84.28:1258,84,0	1/1:0,39:39:99:1662,111,0	1/1:1,17:18:51.17:764,51,0	1/1:3,36:39:99:1572,108,0	0/0:21,0:21:60.18:0,60,765	1/1:0,31:31:87.29:1292,87,0	1/1:1,22:23:60.20:899,60,0	0/0:26,0:26:78.25:0,78,1012	1/1:2,26:28:81.27:1212,81,0	1/1:0,30:30:81.27:1211,81,0	1/1:1,32:33:87.29:1302,87,0	1/1:2,36:38:99:1482,99,0	1/1:1,34:35:99:1509,102,0	1/1:2,28:30:85.51:1232,86,0	1/1:1,17:17:39.11:561,39,0	1/1:1,30:31:90.26:1323,90,0	1/1:1,15:16:42.14:629,42,0	0/0:21,0:21:60.19:0,60,777	0/0:17,0:17:48.16:0,48,623	0/0:18,0:18:51.17:0,51,662	1/1:0,28:28:81.27:1213,81,0	1/1:1,24:25:72.22:1053,72,0	1/1:0,29:28:81.27:1212,81,0	1/1:0,4:4:12.04:179,12,0
chr10	80692098	.	G	GT	18804.87	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=18.713;DP=696;FS=0.308;HRun=0;HaplotypeScore=171.6580;InbreedingCoeff=0.9908;MQ=66.25;MQ0=2;MQRankSum=-4.904;QD=39.76;ReadPosRankSum=4.267;VQSLOD=4.0049;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:93.31:1317,93,0	1/1:0,16:16:48.16:682,48,0	0/0:25,0:22:60.19:0,60,816	0/0:21,0:16:42.09:0,42,549	1/1:2,18:20:57.17:773,57,0	0/0:27,0:27:78.25:0,78,1072	0/0:20,0:20:60.18:0,60,821	1/1:3,25:28:71.97:1010,72,0	0/0:32,0:32:96.31:0,96,1325	1/1:2,29:30:88.13:1206,88,0	1/1:1,20:21:57.16:780,57,0	0/0:36,0:36:99:0,108,1492	1/1:1,31:32:93.31:1327,93,0	1/1:0,25:25:75.25:1071,75,0	1/1:0,35:35:99:1488,105,0	1/1:0,30:30:87.29:1238,87,0	1/1:0,25:25:72.24:1019,72,0	1/1:0,14:14:39.13:557,39,0	1/1:2,9:11:30.56:414,31,0	1/1:1,29:30:84.16:1157,84,0	1/1:0,30:30:81.27:1143,81,0	0/0:30,0:30:90.30:0,90,1258	0/0:11,0:11:30.10:0,30,420	0/0:21,0:21:63.21:0,63,881	1/1:0,27:27:75.25:1048,75,0	1/1:0,30:30:90.28:1248,90,0	1/1:1,29:30:84.19:1198,84,0	1/1:0,3:3:9.03:129,9,0
chr10	80693348	.	T	TG	16542.08	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-9.558;DP=651;FS=0.319;HRun=0;HaplotypeScore=77.0870;InbreedingCoeff=0.9994;MQ=85.01;MQ0=0;MQRankSum=-5.245;QD=36.76;ReadPosRankSum=4.664;VQSLOD=4.8045;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:41:84.24:1343,84,0	1/1:1,11:12:24.08:384,24,0	0/0:26,0:26:50.85:0,51,912	0/0:17,0:17:50.77:0,51,584	1/1:1,27:28:35.47:511,35,0	0/0:28,0:28:83.87:0,84,1007	0/0:18,0:18:54.17:0,54,737	1/1:1,27:28:78.24:1199,78,0	0/0:13,0:13:39.12:0,39,531	1/1:1,21:22:60.14:842,60,0	1/1:0,22:22:36.12:569,36,0	0/0:26,0:26:78.22:0,78,1013	1/1:1,22:23:66.22:1055,66,0	1/1:1,20:21:54.18:863,54,0	1/1:1,26:27:69.24:1103,69,0	1/1:1,26:27:78.27:1247,78,0	1/1:1,28:29:81.28:1295,81,0	1/1:1,14:15:42.14:671,42,0	1/1:0,14:14:42.12:646,42,0	1/1:2,19:21:39.11:606,39,0	1/1:1,29:30:57.19:911,57,0	0/0:23,0:23:63.16:0,63,804	0/0:15,0:15:39.98:0,40,485	0/0:35,0:35:99:0,105,1450	1/1:1,28:29:51.14:790,51,0	1/1:1,23:24:72.15:1022,72,0	1/1:0,22:22:66.23:1055,66,0	1/1:0,15:15:27.09:431,27,0
chr10	80694048	.	AAC	A	16953.14	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=15.542;DP=676;FS=7.831;HRun=0;HaplotypeScore=109.8219;InbreedingCoeff=0.9957;MQ=88.59;MQ0=1;MQRankSum=-4.900;QD=36.30;ReadPosRankSum=4.158;VQSLOD=7.0968;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:51.17:699,51,0	1/1:0,11:11:33.11:454,33,0	0/0:27,0:27:75.24:0,75,1275	0/0:20,0:21:57.01:0,57,867	1/1:2,36:38:99:1442,108,0	0/0:29,0:29:75.26:0,75,1324	0/0:18,0:18:54.15:0,54,900	1/1:2,30:32:90.29:1219,90,0	0/0:21,1:22:21.96:0,22,985	1/1:2,31:33:93.31:1278,93,0	1/1:2,26:28:78.26:1070,78,0	0/0:20,0:20:60.21:0,60,1060	1/1:2,29:30:75.25:1031,75,0	1/1:2,22:24:57.19:783,57,0	1/1:0,21:21:63.21:866,63,0	1/1:3,24:27:66.13:907,66,0	1/1:0,15:15:42.14:577,42,0	1/1:0,6:6:15.05:206,15,0	1/1:1,18:19:54.18:739,54,0	1/1:2,33:35:99:1271,99,0	1/1:2,16:18:45.15:619,45,0	0/0:33,0:33:96.31:0,96,1669	0/0:28,0:28:81.28:0,81,1422	0/0:11,0:11:33.10:0,33,556	1/1:1,33:34:96.32:1320,96,0	1/1:4,26:30:75.25:1031,75,0	1/1:2,31:33:87.23:1196,87,0	1/1:0,11:11:18.06:247,18,0
chr10	80695213	.	GAA	G	12999.66	PASS	AC=36;AF=0.667;AN=54;BaseQRankSum=7.174;DP=599;FS=1.134;HRun=9;HaplotypeScore=89.8646;InbreedingCoeff=0.9798;MQ=74.51;MQ0=0;MQRankSum=0.653;QD=30.80;ReadPosRankSum=0.191;VQSLOD=5.0104;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:57.17:664,57,0	1/1:0,6:6:18.05:210,18,0	0/0:16,0:16:33.11:0,33,480	0/0:10,0:10:5.97:0,6,155	1/1:0,29:29:87.26:1014,87,0	0/0:1,0:28:62.38:0,62,220	0/0:5,0:12:17.47:0,17,61	1/1:2,22:24:66.15:754,66,0	0/0:18,0:18:51.15:0,51,792	1/1:2,35:37:99:1210,105,0	1/1:1,25:26:75.22:874,75,0	0/0:22,0:22:57.19:0,57,930	1/1:1,19:20:48.14:559,48,0	1/1:1,15:16:42.12:489,42,0	1/1:4,24:28:69.19:804,69,0	1/1:1,27:28:81.24:944,81,0	1/1:0,12:12:30.08:350,30,0	1/1:0,10:10:24.07:280,24,0	1/1:3,20:23:60.15:689,60,0	1/1:1,39:40:99:1223,105,0	1/1:1,14:15:33.10:385,33,0	0/0:21,0:21:57.19:0,57,934	0/0:31,0:31:87.27:0,87,1359	0/0:19,0:19:54.18:0,54,886	1/1:1,26:27:72.21:839,72,0	1/1:1,14:15:42.12:490,42,0	1/1:4,41:45:99:1223,105,0	./.
chr10	80695812	.	G	GA	13905.60	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=10.156;DP=554;FS=8.394;HRun=6;HaplotypeScore=79.2888;InbreedingCoeff=0.9781;MQ=69.97;MQ0=0;MQRankSum=-0.838;QD=33.51;ReadPosRankSum=0.879;VQSLOD=4.6674;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:39.12:490,39,0	1/1:0,11:11:33.11:415,33,0	0/0:9,0:9:24.05:0,24,245	0/0:5,0:5:12.02:0,12,122	1/1:0,27:28:81.26:1017,81,0	0/0:25,0:25:72.15:0,72,728	0/0:11,0:11:27.05:0,27,275	1/1:7,34:41:99:1205,99,0	0/0:22,0:22:54.12:0,54,551	1/1:1,25:26:75.23:931,75,0	1/1:1,29:30:81.22:1001,81,0	0/0:16,0:16:45.10:0,45,459	1/1:0,23:23:69.22:868,69,0	1/1:1,19:20:58.43:719,58,0	1/1:2,17:19:48.12:584,48,0	1/1:2,18:20:51.16:642,51,0	1/1:0,17:17:48.15:604,48,0	1/1:4,18:22:41.84:524,42,0	1/1:4,18:22:57.18:716,57,0	1/1:3,20:23:60.19:755,60,0	1/1:0,2:2:6.02:75,6,0	0/0:18,0:18:45.10:0,45,459	0/0:23,0:23:60.13:0,60,612	0/0:10,0:10:27.06:0,27,275	1/1:3,25:28:72.23:906,72,0	1/1:0,30:30:90.29:1132,90,0	1/1:4,25:29:75.24:943,75,0	1/1:0,10:10:30.10:377,30,0
chr10	80696508	.	A	AG	14758.32	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-11.637;DP=471;FS=6.560;HRun=0;HaplotypeScore=42.7846;InbreedingCoeff=0.9971;MQ=60.13;MQ0=0;MQRankSum=0.294;QD=43.41;ReadPosRankSum=1.828;VQSLOD=5.0046;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:48.16:765,48,0	1/1:0,6:6:18.06:288,18,0	0/0:11,0:10:24.51:0,25,277	0/0:14,0:12:33.11:0,33,458	1/1:0,17:17:48.16:746,48,0	0/0:18,0:18:54.18:0,54,755	0/0:14,0:14:42.14:0,42,587	1/1:1,31:32:90.30:1400,90,0	0/0:16,0:16:48.13:0,48,634	1/1:1,19:19:57.17:866,57,0	1/1:0,16:16:48.16:756,48,0	0/0:15,0:15:45.13:0,45,597	1/1:0,9:9:21.07:335,21,0	1/1:0,18:18:45.15:719,45,0	1/1:0,11:11:27.09:432,27,0	1/1:0,21:21:60.20:957,60,0	1/1:0,23:23:69.24:1101,69,0	1/1:2,25:27:78.27:1234,78,0	1/1:0,18:19:57.19:881,57,0	1/1:1,16:17:45.15:707,45,0	1/1:2,16:17:39.13:623,39,0	0/0:11,0:11:33.11:0,33,461	0/0:16,0:16:45.14:0,45,612	0/0:16,0:16:48.16:0,48,670	1/1:0,24:24:69.24:1103,69,0	1/1:0,22:22:66.21:1032,66,0	1/1:0,9:9:27.09:432,27,0	1/1:0,13:13:24.08:383,24,0
chr10	80696648	.	CG	C	15822.22	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=12.813;DP=583;FS=1.058;HRun=1;HaplotypeScore=60.1450;InbreedingCoeff=0.9958;MQ=60.03;MQ0=0;MQRankSum=0.513;QD=39.46;ReadPosRankSum=1.214;VQSLOD=5.4422;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:50.69:657,51,0	1/1:0,9:9:24.08:335,24,0	0/0:15,0:15:35.29:0,35,563	0/0:18,0:17:48.11:0,48,690	1/1:0,24:24:72.24:1006,72,0	0/0:35,0:35:99:0,105,1648	0/0:18,0:18:54.18:0,54,855	1/1:0,28:28:84.28:1174,84,0	0/0:17,0:17:51.17:0,51,814	1/1:0,27:27:81.27:1133,81,0	1/1:0,5:5:15.05:210,15,0	0/0:24,0:24:69.18:0,69,1050	1/1:0,26:26:75.25:1048,75,0	1/1:0,26:26:75.25:1047,75,0	1/1:0,22:22:60.20:839,60,0	1/1:0,37:37:99:1384,99,0	1/1:0,26:26:69.23:963,69,0	1/1:3,19:22:41.53:837,42,0	1/1:0,19:18:54.15:721,54,0	1/1:0,21:21:57.19:797,57,0	1/1:0,21:21:63.21:881,63,0	0/0:21,0:21:60.19:0,60,935	0/0:23,0:23:69.19:0,69,1067	0/0:11,0:11:30.10:0,30,472	1/1:0,24:24:63.21:881,63,0	1/1:0,22:22:66.22:923,66,0	1/1:0,18:18:54.18:755,54,0	1/1:0,6:6:18.03:230,18,0
chr10	80696821	.	AG	A	17035.35	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=13.046;DP=669;FS=5.089;HRun=1;HaplotypeScore=62.1875;InbreedingCoeff=0.9999;MQ=63.13;MQ0=1;MQRankSum=-2.754;QD=38.45;ReadPosRankSum=2.891;VQSLOD=5.5291;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:60.20:839,60,0	1/1:0,12:12:36.12:498,36,0	0/0:28,0:23:57.24:0,57,1040	0/0:22,1:19:57.19:0,57,911	1/1:1,35:36:99:1433,105,0	0/0:39,0:39:99:0,117,1818	0/0:19,0:19:57.19:0,57,909	1/1:0,27:27:81.27:1133,81,0	0/0:25,0:25:75.24:0,75,1174	1/1:0,22:22:66.22:922,66,0	1/1:0,14:14:39.13:545,39,0	0/0:28,0:28:81.28:0,81,1295	1/1:0,34:34:84.28:1175,84,0	1/1:0,22:22:51.17:713,51,0	1/1:0,24:24:63.21:881,63,0	1/1:0,31:31:84.28:1175,84,0	1/1:1,20:21:57.15:772,57,0	1/1:0,22:22:60.20:836,60,0	1/1:0,21:19:57.19:797,57,0	1/1:0,23:23:66.22:916,66,0	1/1:0,36:36:99:1427,102,0	0/0:21,0:21:63.20:0,63,983	0/0:24,0:24:72.20:0,72,1123	0/0:19,0:19:45.15:0,45,720	1/1:0,23:23:60.20:838,60,0	1/1:0,24:24:72.24:1006,72,0	1/1:0,18:18:48.16:668,48,0	1/1:0,11:11:33.11:461,33,0
chr10	80697234	.	TGTAGGAGGACCAGCA	T	28926.79	PASS	AB=0.540;AC=37;AF=0.661;AN=56;BaseQRankSum=17.159;DP=542;FS=12.201;HRun=0;HaplotypeScore=249.2905;InbreedingCoeff=0.8876;MQ=54.00;MQ0=6;MQRankSum=-12.254;QD=86.09;ReadPosRankSum=-0.100;VQSLOD=3.2705;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,28:38:60.20:2606,60,0	1/1:0,6:6:18.06:765,18,0	0/0:31,0:23:63.22:0,63,3492	0/0:25,0:22:66.23:0,66,4043	1/1:4,10:14:18.06:489,18,0	0/0:23,0:23:63.22:0,63,4299	0/0:28,0:28:84.29:0,84,5736	1/1:8,15:23:45.11:1822,45,0	0/0:30,0:30:90.31:0,90,6316	1/1:3,22:25:66.23:2413,66,0	1/1:1,10:11:15.05:665,15,0	0/0:24,0:24:72.25:0,72,5048	1/1:2,23:25:56.84:2524,57,0	1/1:3,12:15:36.12:1635,36,0	1/1:2,17:19:45.15:2050,45,0	0/1:5,29:34:99:3606,0,141	1/1:4,11:15:24.08:1070,24,0	1/1:4,11:15:21.07:957,21,0	1/1:5,18:20:51.16:1915,51,0	1/1:0,8:8:21.07:854,21,0	1/1:6,12:18:21.07:823,21,0	0/0:12,0:12:36.12:0,36,2446	0/0:10,0:10:30.10:0,30,2267	0/0:23,0:23:69.19:0,69,4473	1/1:2,11:13:27.09:1230,27,0	1/1:3,11:14:33.11:1499,33,0	1/1:3,16:19:42.14:1867,42,0	1/1:0,1:1:3.01:137,3,0
chr10	80697616	.	TA	T	5972.97	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=6.251;DP=323;FS=3.004;HRun=9;HaplotypeScore=66.3546;InbreedingCoeff=0.9315;MQ=74.93;MQ0=0;MQRankSum=-4.289;QD=23.99;ReadPosRankSum=3.249;VQSLOD=5.8111;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:39.01:357,39,0	1/1:1,6:7:15.01:137,15,0	0/0:10,0:8:1.65:0,2,100	0/0:13,0:9:7.44:0,7,88	1/1:1,14:15:42.02:384,42,0	0/0:11,0:11:30.09:0,30,346	0/0:7,0:7:21.06:0,21,242	1/1:3,17:20:51.02:467,51,0	0/0:8,0:8:24.07:0,24,277	1/1:1,23:24:69.04:631,69,0	1/1:1,19:20:54.03:494,54,0	0/0:6,0:6:15.04:0,15,173	1/1:1,6:7:15.01:137,15,0	1/1:1,10:11:27.01:247,27,0	1/1:0,10:10:24.01:219,24,0	1/1:0,6:6:18.01:165,18,0	1/1:1,12:13:30.01:274,30,0	1/1:2,11:13:33.02:302,33,0	1/1:0,15:15:41.99:377,42,0	1/1:0,14:14:42.02:384,42,0	1/1:0,4:4:12.01:110,12,0	0/0:6,0:6:15.04:0,15,173	0/0:5,0:5:15.04:0,15,173	0/0:7,0:7:18.05:0,18,206	1/1:0,13:13:33.01:302,33,0	1/1:1,15:16:45.02:411,45,0	1/1:2,13:15:33.01:302,33,0	1/1:1,10:11:30.01:271,30,0
chr10	80697647	.	AGTGTGTGTGTGTGTGTGTGTGTGT	A	6662.61	PASS	AB=0.830;AC=30;AF=0.577;AN=52;BaseQRankSum=7.813;DP=344;FS=13.469;HRun=0;HaplotypeScore=209.3196;InbreedingCoeff=0.5266;MQ=62.74;MQ0=9;MQRankSum=-5.110;QD=31.43;ReadPosRankSum=2.711;VQSLOD=2.9133;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:18:99:167,0,432	./.	0/0:20,0:11:9.03:0,9,295	0/0:27,0:10:12.04:0,12,443	1/1:9,4:13:12.04:636,12,0	0/0:13,0:16:20.97:0,21,1557	0/0:10,0:14:24.08:0,24,1633	1/1:17,6:23:18.02:270,18,0	0/0:11,0:11:18.04:0,18,1281	1/1:16,2:18:9.03:449,9,0	1/1:14,1:15:6.02:234,6,0	0/0:5,0:5:9.03:0,9,828	0/1:7,0:10:99:265,0,179	0/1:5,0:7:99:244,0,122	1/1:6,3:9:12.04:660,12,0	1/1:5,1:7:9.03:402,9,0	1/1:12,0:12:3.01:46,3,0	1/1:8,0:7:2.99:24,3,0	1/1:13,0:13:3.01:47,3,0	1/1:9,2:11:18.06:644,18,0	./.	0/0:7,0:8:15.05:0,15,1355	0/0:7,0:7:15.05:0,15,1386	0/0:12,0:13:33.11:0,33,3350	1/1:7,4:13:21.07:1074,21,0	1/1:7,4:11:15.05:849,15,0	1/1:9,2:11:9.03:469,9,0	0/1:11,1:11:99:183,0,261
chr10	80698852	.	CT	C	10007.75	PASS	AC=36;AF=0.667;AN=54;BaseQRankSum=15.526;DP=572;FS=1.105;HRun=7;HaplotypeScore=141.8155;InbreedingCoeff=0.9955;MQ=75.78;MQ0=0;MQRankSum=-6.979;QD=26.41;ReadPosRankSum=0.305;VQSLOD=2.9171;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:6:18.04:183,18,0	1/1:1,6:7:18.04:184,18,0	0/0:19,0:19:46.66:0,47,510	0/0:13,0:13:25.88:0,26,249	1/1:2,29:31:78.17:794,78,0	0/0:29,0:29:72.23:0,72,906	0/0:15,0:15:45.14:0,45,566	1/1:2,32:34:96.20:973,96,0	0/0:18,0:18:54.17:0,54,679	1/1:3,22:25:69.15:699,69,0	1/1:4,16:20:45.09:452,45,0	0/0:23,0:23:60.18:0,60,740	1/1:3,15:18:45.10:458,45,0	1/1:2,33:34:96.21:979,96,0	1/1:5,17:22:57.07:558,57,0	1/1:0,29:29:87.20:887,87,0	1/1:0,11:11:30.07:305,30,0	1/1:3,10:13:24.05:244,24,0	1/1:2,13:15:39.08:397,39,0	1/1:0,28:28:72.16:734,72,0	1/1:3,7:10:18.04:184,18,0	0/0:24,0:24:69.22:0,69,867	0/0:31,0:31:87.27:0,87,1083	0/0:14,0:14:42.13:0,42,527	1/1:5,18:23:51.09:514,51,0	1/1:3,22:25:66.14:673,66,0	1/1:2,25:27:78.16:789,78,0	./.
chr10	80698919	.	C	CA	10904.43	PASS	AC=36;AF=0.667;AN=54;BaseQRankSum=-3.749;DP=556;FS=2.075;HRun=8;HaplotypeScore=75.9593;InbreedingCoeff=0.9527;MQ=69.64;MQ0=0;MQRankSum=-5.278;QD=28.25;ReadPosRankSum=0.141;VQSLOD=5.1271;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,12:13:36.07:401,36,0	1/1:1,10:11:30.09:346,30,0	0/0:16,0:15:1.63:0,2,150	0/0:9,0:9:20.66:0,21,180	1/1:5,33:38:96.20:1074,96,0	0/0:24,0:23:69.02:0,69,626	0/0:15,0:15:42:0,42,379	1/1:7,28:35:81.24:935,81,0	0/0:12,0:12:30.01:0,30,274	1/1:7,25:32:78.23:900,78,0	1/1:1,17:18:48.06:524,48,0	0/0:22,0:22:60.03:0,60,549	1/1:1,21:22:57.17:658,57,0	1/1:6,25:31:69.21:796,69,0	1/1:2,24:26:69.20:796,69,0	1/1:3,14:17:42.12:484,42,0	1/1:1,5:6:13.28:141,13,0	1/1:4,10:14:9.96:291,10,0	1/1:1,10:12:32.93:360,33,0	1/1:5,22:27:63.19:727,63,0	1/1:2,7:9:21.06:242,21,0	0/0:25,0:25:66.02:0,66,600	0/0:35,0:35:99:0,99,901	0/0:12,0:12:30:0,30,269	1/1:7,18:25:54.11:607,54,0	1/1:1,21:22:66.03:741,66,0	1/1:3,24:28:80.86:879,81,0	./.
chr10	80699793	.	G	GT	12452.86	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=7.162;DP=554;FS=0.379;HRun=7;HaplotypeScore=84.7457;InbreedingCoeff=0.8833;MQ=76.81;MQ0=0;MQRankSum=-1.334;QD=30.45;ReadPosRankSum=2.888;VQSLOD=4.7276;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:36.11:435,36,0	1/1:2,3:5:9.03:109,9,0	0/0:17,0:17:6.33:0,6,142	0/1:7,0:7:13.51:14,0,30	1/1:0,34:34:99:1162,99,0	0/0:26,0:26:60.08:0,60,574	0/0:12,0:12:33.04:0,33,312	1/1:4,30:34:90.15:998,90,0	0/0:26,0:26:72.11:0,72,695	1/1:1,22:23:69.21:827,69,0	1/1:2,26:28:78.24:942,78,0	0/0:18,0:18:54.04:0,54,503	1/1:2,14:16:33.10:399,33,0	1/1:5,20:25:60.18:724,60,0	1/1:1,23:24:63.19:761,63,0	1/1:3,16:19:48.15:580,48,0	1/1:3,17:20:51.15:609,51,0	1/1:1,4:5:9.03:109,9,0	1/1:1,16:17:48.15:580,48,0	1/1:3,34:37:96.19:1126,96,0	1/1:2,7:9:21.06:254,21,0	0/0:21,0:21:54.02:0,54,506	0/0:17,0:17:48.06:0,48,457	0/0:7,0:7:21.03:0,21,203	1/1:4,27:31:78.11:921,78,0	1/1:2,20:22:57.15:674,57,0	1/1:3,26:28:72.22:870,72,0	1/1:0,10:10:30.09:362,30,0
chr10	80700068	.	A	AC	7793.61	PASS	AC=36;AF=0.667;AN=54;BaseQRankSum=18.190;DP=579;FS=13.471;HRun=1;HaplotypeScore=174.4191;InbreedingCoeff=0.9532;MQ=84.01;MQ0=0;MQRankSum=-13.389;QD=19.98;ReadPosRankSum=3.417;VQSLOD=3.5253;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,12:15:21.57:264,22,0	1/1:3,6:9:3.30:100,3,0	0/0:19,0:19:56.82:0,57,726	0/0:27,0:27:65.37:0,65,910	1/1:8,21:29:58.10:483,58,0	0/0:25,0:25:75.25:0,75,1049	0/0:11,0:11:33.11:0,33,461	1/1:8,18:26:71.08:599,71,0	0/0:29,0:29:87.25:0,87,1166	1/1:9,26:35:86.18:719,86,0	1/1:2,17:19:47.77:390,48,0	0/0:30,0:30:90.30:0,90,1259	1/1:1,24:26:74.13:591,74,0	1/1:6,27:33:81.22:655,81,0	1/1:1,21:21:59.85:501,60,0	1/1:5,24:29:69.45:624,69,0	1/1:4,9:13:29.88:234,30,0	1/1:1,5:6:14.99:128,15,0	1/1:2,9:11:15.88:193,16,0	1/1:2,23:25:62.86:530,63,0	1/1:3,10:13:6.37:152,6,0	0/0:19,0:19:57.18:0,57,781	0/0:15,0:15:45.09:0,45,588	0/0:13,0:13:39.13:0,39,545	1/1:5,23:28:51.79:525,52,0	1/1:5,15:20:52.53:456,53,0	1/1:5,26:31:80.74:650,81,0	./.
chr10	80700069	.	A	AC	7589.19	PASS	AC=36;AF=0.667;AN=54;BaseQRankSum=17.655;DP=580;FS=12.603;HRun=0;HaplotypeScore=173.3824;InbreedingCoeff=0.9921;MQ=83.30;MQ0=0;MQRankSum=-13.793;QD=19.36;ReadPosRankSum=3.717;VQSLOD=5.3546;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,12:15:35.91:301,36,0	1/1:3,6:9:14.57:113,15,0	0/0:19,0:19:53.89:0,54,729	0/0:26,0:26:68.29:0,68,933	1/1:8,21:29:59.85:504,60,0	0/0:26,0:26:75.25:0,75,1049	0/0:11,0:11:33.11:0,33,461	1/1:8,18:26:33.90:465,34,0	0/0:27,0:27:81.26:0,81,1116	1/1:9,26:35:44.17:647,44,0	1/1:2,17:19:47.72:389,48,0	0/0:30,0:30:90.30:0,90,1259	1/1:2,24:26:74.59:596,75,0	1/1:3,27:30:73.31:584,73,0	1/1:1,21:21:59.85:501,60,0	1/1:4,24:28:77.05:603,77,0	1/1:6,9:15:14.98:196,15,0	1/1:1,5:6:17.98:151,18,0	1/1:2,9:11:32.20:254,32,0	1/1:4,23:27:62.86:530,63,0	1/1:5,10:15:18.90:169,19,0	0/0:19,0:19:57.18:0,57,781	0/0:16,0:16:45.05:0,45,581	0/0:13,0:13:39.13:0,39,545	1/1:5,23:28:52.54:509,53,0	1/1:5,15:20:43.19:440,43,0	1/1:5,26:31:67.72:638,68,0	./.
chr10	80700775	.	TA	T	655.81	PASS	AB=0.768;AC=19;AF=0.528;AN=36;BaseQRankSum=1.464;DP=126;FS=3.448;HRun=1;HaplotypeScore=101.6262;InbreedingCoeff=0.0060;MQ=35.38;MQ0=4;MQRankSum=-0.933;QD=7.63;ReadPosRankSum=4.144;VQSLOD=1.2380;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:5.16:0,5,25	1/1:2,1:3:2.99:23,3,0	0/0:2,0:1:2.92:0,3,17	0/0:10,0:1:3:0,3,28	0/1:6,4:11:15.86:16,0,27	./.	./.	0/0:10,0:10:17.29:0,17,154	./.	0/1:4,3:6:34.68:35,0,94	1/1:1,2:3:2.90:33,3,0	./.	0/0:5,0:3:2.96:0,3,19	./.	1/1:5,1:6:3:28,3,0	./.	1/1:8,3:11:20.84:176,21,0	0/1:5,1:6:13.70:14,0,26	0/1:6,1:7:11.81:12,0,125	1/1:2,2:4:5.95:46,6,0	./.	./.	./.	./.	0/1:5,3:8:2.61:121,0,3	0/1:6,3:9:67.43:67,0,95	0/1:5,2:7:7.35:107,0,7	1/1:3,1:4:11.52:103,12,0
chr10	80700778	.	ATATATATAT	A	2290.91	PASS	AB=0.871;AC=32;AF=0.762;AN=42;BaseQRankSum=4.643;DP=126;FS=0.000;HRun=0;HaplotypeScore=104.1948;InbreedingCoeff=0.1465;MQ=35.37;MQ0=5;MQRankSum=-0.671;QD=21.02;ReadPosRankSum=1.845;VQSLOD=2.7063;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:14.35:111,14,0	1/1:2,1:3:8.94:119,9,0	0/0:2,0:1:2.80:0,3,13	0/0:13,0:1:2.96:0,3,19	1/1:7,4:11:18.81:251,19,0	./.	0/0:1,0:1:0:0,0,0	0/1:10,0:10:10.22:10,0,97	./.	1/1:4,3:6:13.27:189,13,0	1/1:1,2:3:6.02:105,6,0	./.	1/1:3,0:3:4.25:29,4,0	./.	1/1:5,1:6:12.80:135,13,0	1/1:2,0:2:2.96:19,3,0	1/1:9,3:12:9.97:255,10,0	0/1:5,1:6:26.96:70,0,27	0/1:6,1:7:84.99:85,0,99	1/1:1,2:3:6.49:138,6,0	1/1:1,0:1:3.01:35,3,0	./.	./.	./.	1/1:5,3:8:14.48:246,14,0	0/1:6,3:9:0.55:261,0,1	1/1:5,2:7:9.02:178,9,0	1/1:3,1:4:6.02:170,6,0
chr10	80700787	.	T	TAAAGCTTA	5464.09	PASS	AB=0.958;AC=36;AF=0.783;AN=46;BaseQRankSum=-0.203;DP=139;FS=2.909;HRun=0;HaplotypeScore=90.1251;InbreedingCoeff=0.4166;MQ=52.26;MQ0=5;MQRankSum=-1.737;QD=46.70;ReadPosRankSum=1.539;VQSLOD=4.1623;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:17.73:384,18,0	1/1:4,0:4:12.01:244,12,0	0/0:4,0:3:5.05:0,5,55	0/0:14,0:3:6.01:0,6,99	0/1:10,0:11:25.24:242,0,25	./.	0/0:2,0:2:2.82:0,3,45	1/1:14,0:14:33.11:804,33,0	./.	1/1:9,0:8:20.91:479,21,0	1/1:3,0:3:3.59:36,4,0	./.	1/1:4,0:4:9.03:223,9,0	1/1:2,0:2:3.01:93,3,0	1/1:7,0:7:16.30:414,16,0	1/1:2,0:2:3.01:93,3,0	1/1:5,5:10:15.05:228,15,0	1/1:4,0:4:12.01:322,12,0	1/1:7,0:7:12.04:344,12,0	1/1:7,0:7:13.28:193,13,0	1/1:3,0:3:6.02:130,6,0	./.	0/0:1,0:1:3.01:0,3,46	./.	0/1:5,0:5:8.88:165,0,9	1/1:8,0:8:24.08:517,24,0	1/1:5,0:5:15.05:363,15,0	1/1:3,0:3:9.03:189,9,0
chr10	80701013	.	T	TTC	15301.96	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=15.612;DP=444;FS=2.248;HRun=0;HaplotypeScore=113.8035;InbreedingCoeff=0.9706;MQ=89.96;MQ0=0;MQRankSum=-10.553;QD=51.87;ReadPosRankSum=2.881;VQSLOD=5.6277;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:21:60.20:1131,60,0	1/1:0,7:7:21.07:380,21,0	0/0:21,0:21:50.27:0,50,789	0/0:19,0:19:46.88:0,47,657	1/1:0,17:17:42.14:728,42,0	0/0:15,0:15:42.14:0,42,685	0/0:15,0:15:45.14:0,45,709	1/1:0,25:26:78.25:1478,78,0	0/0:22,1:23:11.27:0,11,1019	1/1:0,12:12:36.12:700,36,0	1/1:1,14:16:39.13:730,39,0	0/0:22,1:23:33.28:0,33,1035	1/1:0,15:15:45.15:848,45,0	1/1:0,23:23:60.20:1142,60,0	1/1:0,15:15:42.14:792,42,0	1/1:0,11:11:33.11:638,33,0	1/1:2,18:20:45.11:834,45,0	1/1:0,17:18:51.13:945,51,0	1/1:0,14:15:39.12:710,39,0	1/1:0,4:4:12.04:234,12,0	1/1:0,19:20:48.16:929,48,0	0/0:6,0:6:18.04:0,18,269	0/0:7,0:7:21.07:0,21,341	0/0:20,0:20:60.20:0,60,969	1/1:0,15:15:42.14:816,42,0	1/1:0,12:12:36.12:696,36,0	1/1:0,25:26:75.26:1455,75,0	1/1:0,2:2:6.02:117,6,0
chr10	80701849	.	G	GT	15940.06	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-16.657;DP=663;FS=4.107;HRun=5;HaplotypeScore=58.7480;InbreedingCoeff=0.9951;MQ=88.32;MQ0=0;MQRankSum=-4.516;QD=35.50;ReadPosRankSum=3.798;VQSLOD=4.9561;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:75.24:986,75,0	1/1:2,12:14:33.11:434,33,0	0/0:24,0:24:69.14:0,69,716	0/0:22,0:22:54.13:0,54,578	1/1:2,40:42:99:1546,120,0	0/0:26,0:26:75.17:0,75,798	0/0:18,0:18:51.11:0,51,540	1/1:1,24:25:72.22:932,72,0	0/0:20,0:20:54.13:0,54,580	1/1:1,31:32:93.30:1223,93,0	1/1:2,16:18:45.15:589,45,0	0/0:22,0:22:66.17:0,66,709	1/1:1,21:22:57.19:750,57,0	1/1:3,21:24:63.20:829,63,0	1/1:1,28:29:84.27:1105,84,0	1/1:2,22:24:30.95:757,31,0	1/1:1,27:28:78.25:1026,78,0	1/1:1,15:16:45.15:591,45,0	1/1:4,18:22:54.18:707,54,0	1/1:1,40:41:99:1423,111,0	1/1:0,16:16:48.16:631,48,0	0/0:30,0:30:81.18:0,81,860	0/0:26,0:26:75.16:0,75,795	0/0:26,0:26:78.18:0,78,829	1/1:0,12:12:36.12:474,36,0	1/1:1,20:21:60.20:790,60,0	1/1:2,25:27:75.24:986,75,0	1/1:1,4:5:12.04:158,12,0
chr10	80704867	.	A	AAAG	5678.43	PASS	AB=0.766;AC=32;AF=0.571;AN=56;BaseQRankSum=6.365;DP=336;FS=2.071;HRun=0;HaplotypeScore=82.3578;InbreedingCoeff=0.3524;MQ=69.09;MQ0=2;MQRankSum=-7.540;QD=24.37;ReadPosRankSum=2.108;VQSLOD=4.9414;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,4:8:15.76:276,16,0	1/1:1,1:2:5.99:76,6,0	0/0:25,0:10:19.61:0,20,246	0/1:21,0:14:6.75:7,0,180	0/1:6,7:13:13.55:355,0,14	0/0:21,0:21:48.13:0,48,750	0/0:9,0:9:21.06:0,21,301	1/1:13,9:22:1.51:724,2,0	0/0:11,0:11:29.99:0,30,325	1/1:6,10:16:20.92:635,21,0	0/1:12,4:15:24.04:255,0,24	0/0:10,0:10:29.69:0,30,335	1/1:8,2:10:14.28:186,14,0	0/1:2,7:9:1.64:272,0,2	1/1:8,5:13:13.14:348,13,0	1/1:3,0:3:5.79:38,6,0	1/1:5,6:11:0.84:298,1,0	1/1:3,5:8:2.56:168,3,0	1/1:8,3:10:16.24:235,16,0	1/1:6,6:12:18.11:403,18,0	0/1:5,1:6:6.71:91,0,7	0/0:6,0:6:17.99:0,18,198	0/0:11,0:11:27.04:0,27,389	0/0:10,0:10:27.05:0,27,343	0/1:6,7:14:36.31:329,0,36	0/1:8,3:11:15.27:220,0,15	1/1:14,7:22:47.18:681,47,0	0/1:4,1:5:17.67:83,0,18
chr10	80704873	.	AG	A	1856.08	PASS	AB=0.961;AC=41;AF=0.732;AN=56;BaseQRankSum=7.336;DP=326;FS=6.797;HRun=1;HaplotypeScore=80.9243;InbreedingCoeff=0.4973;MQ=67.08;MQ0=2;MQRankSum=-6.067;QD=6.51;ReadPosRankSum=-1.120;VQSLOD=0.0549;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:17.90:82,18,0	1/1:2,0:2:0.70:10,1,0	0/1:28,1:12:2.65:3,0,99	0/1:17,4:13:8.94:9,0,96	1/1:15,1:16:23.84:220,24,0	0/1:21,0:21:16.21:16,0,31	0/1:9,0:9:12.22:12,0,15	1/1:18,0:18:22.53:154,23,0	0/0:11,0:11:12.81:0,13,231	1/1:15,0:15:31.60:197,32,0	1/1:16,0:15:24.09:164,24,0	0/1:11,0:11:3.01:3,0,200	1/1:9,1:10:6.03:30,6,0	1/1:7,0:7:17.24:90,17,0	1/1:9,0:9:7.31:71,7,0	0/0:3,0:3:2.22:0,2,7	1/1:9,0:9:19.07:93,19,0	1/1:7,0:7:13.92:79,14,0	1/1:7,1:7:13.32:70,13,0	1/1:10,0:10:18.60:107,19,0	1/1:7,0:7:15.24:82,15,0	0/0:7,0:7:7.41:0,7,126	0/0:10,0:10:22.86:0,23,262	0/0:10,0:10:27.88:0,28,245	1/1:18,0:18:39.43:225,39,0	1/1:11,0:11:15.20:111,15,0	1/1:19,1:20:22.97:178,23,0	1/1:3,0:3:6.67:26,7,0
chr10	80704874	.	G	GAA	3142	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=5.719;DP=338;FS=18.840;HRun=11;HaplotypeScore=85.8360;InbreedingCoeff=0.8541;MQ=66.70;MQ0=2;MQRankSum=-7.932;QD=15.25;ReadPosRankSum=-1.563;VQSLOD=0.3444;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,4:8:12.97:156,13,0	1/1:0,2:2:6.02:85,6,0	0/0:29,0:12:19.62:0,20,148	0/0:22,0:14:15.29:0,15,88	1/1:12,3:16:10.81:253,11,0	0/0:3,0:21:38.45:0,38,167	0/0:1,0:9:16.40:0,16,70	1/1:15,3:18:19.74:174,20,0	0/0:11,0:11:29.06:0,29,260	1/1:9,6:15:26.67:331,27,0	1/1:14,3:16:16.49:274,16,0	0/0:11,0:12:24.99:0,25,226	1/1:1,8:10:8.89:89,9,0	1/1:4,3:7:14.64:179,15,0	1/1:3,6:10:17.42:224,17,0	1/1:1,3:4:3.01:44,3,0	1/1:6,2:9:21.11:157,21,0	1/1:8,0:8:0.48:40,0,0	1/1:2,7:8:21.01:251,21,0	1/1:8,3:11:17.53:192,18,0	1/1:5,2:7:14.54:118,15,0	0/0:7,0:7:10.85:0,11,89	0/0:10,0:10:26.79:0,27,244	0/0:10,0:10:26.75:0,27,231	1/1:13,4:18:40.66:378,41,0	1/1:7,4:11:14.65:147,15,0	1/1:10,11:22:10.51:241,11,0	1/1:2,0:4:5.99:19,6,0
chr10	80704996	.	A	AGTTTC	4767.81	PASS	AC=30;AF=0.577;AN=52;BaseQRankSum=-5.174;DP=128;FS=0.000;HRun=0;HaplotypeScore=88.4741;InbreedingCoeff=0.6581;MQ=61.21;MQ0=0;MQRankSum=-7.207;QD=57.44;ReadPosRankSum=0.638;VQSLOD=5.1746;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,2:3:5.98:184,6,0	0/0:5,0:4:12:0,12,169	0/0:5,0:4:8.98:0,9,110	1/1:0,6:6:18.06:537,18,0	0/0:16,0:16:48.16:0,48,1008	0/0:5,0:5:15.05:0,15,296	1/1:4,7:11:33.11:829,33,0	0/0:2,0:2:6.02:0,6,126	1/1:0,2:2:6.02:183,6,0	1/1:5,1:6:4.30:98,4,0	0/0:4,0:4:12.04:0,12,239	1/1:1,2:3:6.02:183,6,0	1/1:3,2:5:6.02:181,6,0	0/0:1,0:1:1.25:0,1,3	0/0:2,0:2:3.01:0,3,46	1/1:3,2:5:14.41:339,14,0	1/1:8,0:8:1.44:120,1,0	1/1:1,1:2:3.01:92,3,0	1/1:1,5:6:15.03:450,15,0	./.	0/0:1,0:1:3.01:0,3,63	0/0:3,0:3:6.02:0,6,126	0/0:1,0:1:3.01:0,3,63	1/1:5,7:12:20.04:638,20,0	1/1:2,1:3:2.94:102,3,0	1/1:1,3:4:11.07:279,11,0	1/1:1,6:7:18.53:552,19,0
chr10	80706581	.	G	GGCCAGTGGTAAT	44229.12	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-4.425;DP=602;FS=0.000;HRun=0;HaplotypeScore=179.9422;InbreedingCoeff=0.9872;MQ=85.84;MQ0=0;MQRankSum=-16.773;QD=113.70;ReadPosRankSum=0.202;VQSLOD=4.7584;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,5:19:27.09:1579,27,0	1/1:3,5:13:24.08:1264,24,0	0/0:24,0:24:23.62:0,24,1797	0/0:29,0:29:67.31:0,67,2123	1/1:2,12:27:42.01:1458,42,0	0/0:26,0:26:75.26:0,75,2743	0/0:21,0:21:57.18:0,57,2017	1/1:20,4:44:99:6171,129,0	0/0:17,0:17:48.15:0,48,1684	1/1:2,8:14:33.11:2041,33,0	1/1:5,23:36:75.26:4357,75,0	0/0:22,0:22:63.22:0,63,2284	1/1:3,10:20:39.13:2205,39,0	1/1:2,5:12:21.07:1295,21,0	1/1:2,7:16:27.09:1642,27,0	1/1:4,5:15:24.08:1359,24,0	1/1:2,7:15:24.08:1276,24,0	1/1:2,7:16:27.09:1540,27,0	1/1:8,5:20:60.21:3221,60,0	1/1:11,19:33:78.27:4319,78,0	1/1:3,2:8:9.03:426,9,0	0/0:25,0:25:69.22:0,69,2409	0/0:24,0:24:66.21:0,66,2206	0/0:25,0:25:75.26:0,75,2776	1/1:6,20:35:75.25:4018,75,0	1/1:5,9:16:45.15:2532,45,0	1/1:4,12:21:48.16:2925,48,0	1/1:4,2:8:18.06:602,18,0
chr10	80707460	.	CTT	C	10038.85	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=12.344;DP=598;FS=8.161;HRun=11;HaplotypeScore=135.9814;InbreedingCoeff=0.9303;MQ=68.61;MQ0=0;MQRankSum=-1.450;QD=23.08;ReadPosRankSum=3.906;VQSLOD=3.2355;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,41:45:99:1110,108,0	1/1:2,9:11:24.05:254,24,0	0/0:16,0:13:6.43:0,6,141	0/0:10,0:7:8.77:0,9,70	1/1:3,19:22:51.06:541,51,0	0/0:8,0:21:48.09:0,48,510	0/0:2,0:12:21.03:0,21,201	1/1:15,13:28:16.37:361,16,0	0/0:20,0:22:66.18:0,66,948	1/1:3,21:24:63.13:661,63,0	1/1:3,7:10:20.99:208,21,0	0/0:22,0:24:71.70:0,72,1012	1/1:6,27:34:65.97:740,66,0	1/1:1,30:32:69.12:790,69,0	1/1:2,21:25:62.61:631,63,0	1/1:3,14:18:38.80:395,39,0	1/1:1,16:18:44.83:459,45,0	1/1:3,12:15:16.30:329,16,0	1/1:3,15:18:45.09:478,45,0	1/1:3,22:25:54.03:550,54,0	1/1:5,14:21:0.19:279,0,0	0/0:22,0:22:60.20:0,60,904	0/0:9,0:11:32.03:0,32,368	0/0:18,0:24:68.69:0,69,936	1/1:1,19:20:51.12:540,51,0	1/1:3,22:25:65.88:682,66,0	1/1:3,22:26:56.74:586,57,0	1/1:4,14:18:42.10:445,42,0
chr10	80709224	.	T	TA	1252.23	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.072;DP=399;FS=2.288;HRun=6;HaplotypeScore=51.9644;InbreedingCoeff=0.8865;MQ=67.53;MQ0=0;MQRankSum=-0.860;QD=29.82;ReadPosRankSum=2.726;VQSLOD=4.3309;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:45.14:566,45,0	0/0:5,0:5:15.03:0,15,153	0/0:6,0:6:11.98:0,12,115	0/0:3,0:3:8.69:0,9,72	0/0:28,0:28:84.19:0,84,856	0/0:26,0:26:75.14:0,75,748	0/0:4,0:4:12.03:0,12,122	0/0:22,0:22:60.12:0,60,607	0/0:14,0:14:36.07:0,36,362	0/0:20,0:20:51.10:0,51,510	0/0:22,0:22:63.13:0,63,638	0/0:9,0:9:27.06:0,27,275	1/1:0,13:14:36.11:451,36,0	1/1:1,10:11:30.10:377,30,0	0/0:19,0:19:48.09:0,48,482	0/0:15,0:15:45.08:0,45,447	0/0:21,0:21:63.14:0,63,642	0/0:12,0:12:33.03:0,33,326	0/0:18,0:18:48.10:0,48,487	0/0:21,0:21:57.12:0,57,576	0/0:6,0:6:12.02:0,12,122	0/0:6,0:6:18.04:0,18,184	0/0:7,0:7:21.05:0,21,214	0/0:2,0:2:6.01:0,6,61	0/0:25,0:25:66.15:0,66,673	0/0:14,0:14:42.10:0,42,429	0/0:29,0:29:81.16:0,81,819	0/0:3,0:3:9.02:0,9,92
chr10	80719800	.	A	AT	1425.69	PASS	AC=28;AF=0.583;AN=48;BaseQRankSum=-1.932;DP=228;FS=21.570;HRun=0;HaplotypeScore=30.6587;InbreedingCoeff=0.6988;MQ=70.24;MQ0=60;MQRankSum=-3.734;QD=13.98;ReadPosRankSum=-1.138;VQSLOD=1.7788;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:5:9:0,9,104	1/1:0,2:1:3.01:43,3,0	0/0:23,0:11:30.72:0,31,240	0/0:20,0:8:12:0,12,117	1/1:1,0:1:2.94:18,3,0	0/0:20,0:17:48.14:0,48,650	0/0:15,0:11:33.06:0,33,418	1/1:5,17:7:21.03:281,21,0	0/0:6,0:4:12.03:0,12,152	1/1:3,3:3:6:69,6,0	./.	0/0:9,0:7:20.98:0,21,248	0/0:6,0:3:9:0,9,104	0/0:11,0:6:18.04:0,18,219	1/1:4,5:7:21.04:266,21,0	1/1:5,1:2:3.01:43,3,0	1/1:4,2:2:6.02:87,6,0	1/1:8,1:2:2.98:22,3,0	1/1:2,4:2:3.01:44,3,0	1/1:1,0:1:3.01:42,3,0	1/1:1,4:5:14.91:165,15,0	./.	./.	0/0:5,0:1:3.01:0,3,42	1/1:2,2:1:3.01:43,3,0	1/1:3,6:3:9.02:114,9,0	1/1:4,12:9:27.02:366,27,0	./.
chr10	80719841	.	G	GA	3978.72	PASS	AC=42;AF=0.808;AN=52;BaseQRankSum=0.547;DP=179;FS=0.000;HRun=7;HaplotypeScore=24.3442;InbreedingCoeff=0.7657;MQ=57.91;MQ0=7;MQRankSum=-3.279;QD=27.63;ReadPosRankSum=0.819;VQSLOD=3.0855;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,6:7:18.05:215,18,0	1/1:0,2:2:6.02:72,6,0	0/0:8,0:5:8.97:0,9,78	0/0:5,0:5:12.01:0,12,113	1/1:0,4:4:12.04:145,12,0	1/1:14,0:14:32.84:252,33,0	1/1:15,0:14:29.86:233,30,0	1/1:2,19:21:57.07:606,57,0	0/0:7,0:6:18.03:0,18,174	1/1:0,4:4:12.04:145,12,0	1/1:0,1:1:3.01:36,3,0	0/0:8,0:8:18.03:0,18,174	1/1:1,5:4:12.04:145,12,0	1/1:1,10:10:30.09:362,30,0	1/1:0,9:9:27.08:326,27,0	1/1:0,2:2:6.02:72,6,0	1/1:0,5:5:15.05:181,15,0	1/1:1,2:2:6.02:72,6,0	1/1:1,5:5:15.05:180,15,0	1/1:0,1:1:3.01:36,3,0	1/1:2,4:6:12.04:145,12,0	./.	./.	0/0:7,0:6:18.01:0,18,168	1/1:0,2:2:6.02:72,6,0	1/1:2,8:7:21.06:254,21,0	1/1:2,10:11:27.08:319,27,0	1/1:0,3:3:9.03:109,9,0
chr10	80719847	.	A	AC	1808.04	PASS	AB=1.000;AC=37;AF=0.712;AN=52;BaseQRankSum=4.511;DP=181;FS=2.393;HRun=0;HaplotypeScore=31.8167;InbreedingCoeff=0.4351;MQ=55.62;MQ0=1;MQRankSum=-2.885;QD=12.05;ReadPosRankSum=4.372;VQSLOD=3.7831;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:7:13.84:67,14,0	1/1:2,0:2:5.78:31,6,0	0/0:8,0:6:18.02:0,18,195	0/0:4,0:4:12.04:0,12,168	0/1:6,0:6:5.77:43,0,6	1/1:0,13:13:33.11:492,33,0	1/1:0,13:13:30.10:447,30,0	0/1:25,0:25:82.64:94,0,83	0/0:6,0:6:18.06:0,18,251	1/1:4,0:4:10.54:45,11,0	1/1:1,0:1:2.88:15,3,0	0/0:7,0:7:18.06:0,18,250	1/1:6,0:4:10.75:50,11,0	1/1:10,0:10:27.60:137,28,0	1/1:9,0:9:23.92:111,24,0	1/1:2,0:2:5.27:25,5,0	0/1:6,0:6:7.28:48,0,7	1/1:3,0:3:5.49:24,5,0	0/1:9,0:8:25.98:26,0,59	1/1:1,0:1:2.50:9,2,0	0/1:6,0:6:3.01:52,0,3	./.	./.	0/0:6,0:6:18.06:0,18,251	1/1:2,0:2:5.74:31,6,0	1/1:10,0:7:18.08:77,18,0	1/1:11,0:11:24.24:121,24,0	1/1:3,0:3:7.93:34,8,0
chr10	80720093	.	TAC	T	908.05	PASS	AB=1.000;AC=29;AF=0.659;AN=44;BaseQRankSum=-3.008;DP=99;FS=4.901;HRun=0;HaplotypeScore=21.6262;InbreedingCoeff=0.5097;MQ=88.57;MQ0=1;MQRankSum=-1.756;QD=13.55;ReadPosRankSum=-1.328;VQSLOD=2.3268;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:2.99:24,3,0	1/1:2,0:2:5.99:50,6,0	0/0:6,0:6:9.01:0,9,84	0/0:9,0:6:7.27:0,7,57	1/1:6,0:6:11.97:95,12,0	1/1:3,6:9:15.02:167,15,0	1/1:2,0:2:5.99:50,6,0	1/1:16,0:16:10.74:215,11,0	0/0:2,0:2:3.01:0,3,52	1/1:2,0:2:6.01:55,6,0	1/1:2,0:2:5.99:50,6,0	0/0:3,0:3:9.01:0,9,128	1/1:1,0:1:3:25,3,0	1/1:2,0:2:2.99:24,3,0	1/1:2,0:1:3:25,3,0	./.	1/1:7,0:7:5.98:46,6,0	./.	0/1:3,0:3:10.56:28,0,11	1/1:3,0:3:8.99:75,9,0	./.	./.	0/0:3,0:3:8.98:0,9,72	0/0:2,0:2:6:0,6,76	0/0:2,0:2:0.47:0,0,1	./.	1/1:7,0:7:12.80:126,13,0	./.
chr10	80721085	.	CGTGTGTGT	C	419.19	PASS	AB=0.963;AC=9;AF=0.281;AN=32;BaseQRankSum=3.537;DP=457;FS=1.552;HRun=0;HaplotypeScore=108.5998;InbreedingCoeff=0.4245;MQ=69.55;MQ0=16;MQRankSum=-3.385;QD=4.87;ReadPosRankSum=1.290;VQSLOD=2.1471;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:0:0,0,0	./.	./.	./.	./.	0/0:30,0:29:18.04:0,18,471	./.	0/0:19,0:17:0.47:0,0,1	0/0:19,0:19:18.06:0,18,377	0/0:23,0:22:3.01:0,3,83	./.	0/0:16,0:16:12.04:0,12,398	./.	1/1:10,0:11:3.01:44,3,0	1/1:14,0:15:3.01:42,3,0	1/1:11,2:16:6.49:148,6,0	0/1:25,1:25:58.39:186,0,58	0/0:14,1:14:3.01:0,3,83	./.	./.	./.	0/0:14,0:14:6.02:0,6,189	0/0:15,0:14:12.04:0,12,418	0/0:17,0:15:9.03:0,9,277	./.	0/0:12,0:12:0.89:0,1,2	1/1:16,0:17:3.39:107,3,0	./.
chr10	80723244	.	TATC	T	14856.31	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=13.117;DP=519;FS=0.367;HRun=0;HaplotypeScore=78.5360;InbreedingCoeff=0.9827;MQ=80.51;MQ0=0;MQRankSum=-5.112;QD=40.59;ReadPosRankSum=2.619;VQSLOD=6.0331;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:54.18:899,54,0	1/1:0,10:10:30.10:500,30,0	0/0:12,0:12:33.11:0,33,716	0/0:18,0:18:42.34:0,42,985	1/1:0,15:15:45.15:749,45,0	0/0:24,0:24:69.24:0,69,1542	0/0:13,0:13:36.12:0,36,816	1/1:5,35:40:99:1664,105,0	0/0:19,0:19:57.20:0,57,1272	1/1:0,18:18:54.17:875,54,0	1/1:1,21:22:60.03:906,60,0	0/0:16,0:16:48.16:0,48,1088	1/1:2,16:18:48.16:799,48,0	1/1:1,18:19:48.16:799,48,0	1/1:0,21:21:45.15:749,45,0	1/1:1,15:16:30.08:500,30,0	1/1:1,10:11:27.09:450,27,0	1/1:0,13:13:39.13:649,39,0	1/1:2,14:16:42.13:672,42,0	1/1:0,23:23:54.18:899,54,0	1/1:0,11:11:21.07:350,21,0	0/0:20,0:20:54.19:0,54,1201	0/0:15,0:15:42.14:0,42,934	0/0:16,0:16:45.15:0,45,990	1/1:1,23:24:63.22:1049,63,0	1/1:4,21:25:63.22:1049,63,0	1/1:3,28:31:72.25:1198,72,0	1/1:0,5:5:6.02:100,6,0
chr10	80723540	.	ACTATCTAT	A	381.86	PASS	AB=0.724;AC=7;AF=0.152;AN=46;BaseQRankSum=2.768;DP=454;FS=1.177;HRun=0;HaplotypeScore=133.0067;InbreedingCoeff=0.5959;MQ=69.50;MQ0=1;MQRankSum=-2.127;QD=5.38;ReadPosRankSum=2.182;VQSLOD=2.5530;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,5:27:18.04:284,18,0	0/0:9,0:10:2.99:0,3,24	./.	./.	0/0:23,0:23:39.12:0,39,1320	0/1:13,7:21:15.35:99,0,15	1/1:6,4:10:3.01:36,3,0	./.	0/0:14,0:15:12.04:0,12,412	0/0:12,0:12:24.08:0,24,943	0/0:5,0:12:5.88:0,6,189	0/0:17,0:17:27.09:0,27,973	1/1:8,0:13:9.02:89,9,0	./.	0/0:8,0:14:21.07:0,21,617	0/0:12,0:15:21.02:0,21,537	0/0:20,0:20:42.10:0,42,1446	0/0:14,0:14:18.05:0,18,529	0/0:11,0:11:3.01:0,3,122	0/0:20,0:20:24.08:0,24,935	0/0:22,0:22:27.07:0,27,915	0/0:12,0:12:12.04:0,12,487	0/0:8,0:8:12.01:0,12,290	0/0:12,0:12:12.04:0,12,334	0/0:9,5:20:17.98:0,18,168	0/0:13,0:13:24.08:0,24,871	0/0:28,0:28:33.11:0,33,1259	./.
chr10	80723621	.	CTATA	C	946.93	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.834;DP=474;FS=2.611;HRun=0;HaplotypeScore=123.9810;InbreedingCoeff=0.7769;MQ=98.50;MQ0=6;MQRankSum=-0.345;QD=20.59;ReadPosRankSum=2.401;VQSLOD=3.1279;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,8:11:15.05:260,15,0	0/0:7,0:6:12.03:0,12,253	0/0:50,0:33:10.34:0,10,91	0/0:97,0:55:41.16:0,41,398	0/0:11,0:11:27.09:0,27,647	0/0:18,0:18:42.14:0,42,1049	0/0:7,0:7:12.03:0,12,250	0/0:33,0:33:69.20:0,69,1509	0/0:11,0:12:26.88:0,27,610	0/0:14,0:14:30.07:0,30,566	0/0:8,0:8:9.02:0,9,225	0/0:13,0:14:31.71:0,32,698	1/1:5,15:20:35.50:614,36,0	1/1:6,9:15:11.19:207,11,0	0/0:7,0:7:18.06:0,18,452	0/0:11,0:11:11.88:0,12,294	0/0:17,0:18:38.77:0,39,781	0/0:8,0:8:18.06:0,18,436	0/0:19,0:20:44.90:0,45,906	0/0:11,0:11:21.03:0,21,352	0/0:4,0:5:5.60:0,6,101	0/0:4,0:4:6.01:0,6,101	0/0:8,0:8:18.05:0,18,400	0/0:2,0:2:3.01:0,3,76	0/0:25,0:25:51.16:0,51,1198	0/0:17,0:17:45.08:0,45,980	0/0:17,0:17:27.08:0,27,630	0/0:4,0:4:9.01:0,9,132
chr10	80723659	.	T	TGA	784.09	PASS	AB=0.921;AC=30;AF=0.714;AN=42;BaseQRankSum=-1.457;DP=373;FS=0.000;HRun=0;HaplotypeScore=74.5262;InbreedingCoeff=0.4329;MQ=68.27;MQ0=7;MQRankSum=-0.373;QD=3.29;ReadPosRankSum=0.710;VQSLOD=1.5130;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:0.45:1,0,0	./.	./.	./.	1/1:11,0:11:2.99:24,3,0	0/0:15,0:20:2.72:0,3,13	0/0:7,0:12:11.06:0,11,53	0/1:30,0:30:0:0,0,0	1/1:9,1:15:6.01:70,6,0	1/1:10,0:13:6:65,6,0	./.	1/1:10,4:14:5.93:61,6,0	1/1:15,0:15:3.01:42,3,0	1/1:14,3:17:12.02:155,12,0	./.	1/1:8,0:8:5.97:60,6,0	0/0:10,0:12:14.26:0,14,139	1/1:4,0:4:3:25,3,0	1/1:21,0:20:5.98:47,6,0	0/0:16,0:16:2.99:0,3,24	./.	./.	1/1:18,0:18:5.79:37,6,0	0/0:4,0:4:2.79:0,3,18	1/1:18,0:18:18:167,18,0	1/1:18,0:18:11.97:125,12,0	0/1:13,3:16:32.14:32,0,75	1/1:4,0:4:0.47:1,0,0
chr10	80724270	.	T	TA	8049.26	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-5.732;DP=400;FS=6.452;HRun=6;HaplotypeScore=39.6431;InbreedingCoeff=0.9228;MQ=73.32;MQ0=0;MQRankSum=-0.341;QD=32.72;ReadPosRankSum=-2.250;VQSLOD=4.0461;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:39.09:0,39,398	1/1:0,2:2:6.02:75,6,0	0/0:8,0:9:0.81:0,1,81	0/0:4,0:4:2.99:0,3,27	1/1:1,10:11:30.10:377,30,0	0/0:15,0:15:45.10:0,45,459	0/0:14,0:14:30.05:0,30,299	1/1:1,25:26:75.24:943,75,0	0/0:8,0:8:24.05:0,24,245	1/1:0,12:12:36.10:440,36,0	1/1:6,24:30:75.15:903,75,0	0/0:10,0:10:30.07:0,30,305	0/0:15,0:15:39.08:0,39,398	0/0:11,0:11:33.07:0,33,337	1/1:0,14:14:42.13:528,42,0	1/1:1,7:8:15.05:189,15,0	1/1:0,18:18:45.14:566,45,0	1/1:0,12:12:30.10:377,30,0	1/1:2,8:10:21.05:251,21,0	1/1:2,30:32:87.19:1059,87,0	1/1:0,11:11:30.10:377,30,0	0/0:22,0:22:63.14:0,63,643	0/0:22,0:22:60.14:0,60,612	0/0:11,0:11:27.06:0,27,275	1/1:0,16:16:48.15:604,48,0	1/1:2,16:18:48.15:604,48,0	1/1:1,18:19:42.13:528,42,0	1/1:0,7:7:18.06:226,18,0
chr10	80724741	.	C	CTCT	5606.70	PASS	AB=0.993;AC=39;AF=0.696;AN=56;BaseQRankSum=8.066;DP=487;FS=3.135;HRun=0;HaplotypeScore=100.2807;InbreedingCoeff=0.6215;MQ=52.37;MQ0=42;MQRankSum=-7.471;QD=15.32;ReadPosRankSum=0.026;VQSLOD=4.6892;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:14:1.52:263,2,0	1/1:10,0:10:13.28:163,13,0	0/0:35,0:12:20.98:0,21,252	0/1:45,0:20:17.75:18,0,261	1/1:23,0:22:35.13:404,35,0	1/1:11,15:23:8.17:110,8,0	0/0:17,0:15:3.48:0,3,30	0/1:29,0:27:52.35:491,0,52	0/0:13,0:13:36.12:0,36,489	1/1:22,0:20:33.96:527,34,0	1/1:16,0:14:14.92:140,15,0	0/0:10,0:9:6.98:0,7,141	1/1:15,0:14:41.72:410,42,0	1/1:7,0:4:12.03:146,12,0	1/1:15,0:15:26.09:315,26,0	1/1:16,0:15:42.13:547,42,0	1/1:15,0:10:12.04:153,12,0	0/1:6,0:3:16.62:38,0,17	1/1:15,0:13:15.01:382,15,0	1/1:17,0:15:33.83:442,34,0	1/1:10,0:8:8.50:71,8,0	0/0:12,0:12:19.76:0,20,284	0/0:19,0:18:32.83:0,33,406	0/0:14,0:13:15.13:0,15,222	1/1:14,0:12:16.30:203,16,0	1/1:16,0:14:10.93:278,11,0	1/1:20,0:18:17.63:362,18,0	1/1:10,0:5:12.02:144,12,0
chr10	80724743	.	C	CT	5629.17	PASS	AB=0.978;AC=35;AF=0.625;AN=56;BaseQRankSum=8.337;DP=485;FS=2.974;HRun=1;HaplotypeScore=86.3911;InbreedingCoeff=0.4215;MQ=48.34;MQ0=46;MQRankSum=-7.783;QD=15.42;ReadPosRankSum=-0.111;VQSLOD=4.6915;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,5:14:21.98:283,22,0	0/1:8,0:8:9.36:147,0,9	0/0:29,0:10:20.88:0,21,259	0/1:43,0:18:11.08:11,0,268	1/1:15,11:25:35.45:402,35,0	0/1:26,3:26:9.90:54,0,10	0/0:15,2:16:6.02:0,6,70	0/1:30,0:27:99:484,0,150	0/0:15,0:15:36.12:0,36,457	1/1:10,12:20:16.41:494,16,0	1/1:14,1:13:14.92:140,15,0	0/0:10,0:9:22.95:0,23,215	1/1:8,7:14:42.13:539,42,0	1/1:6,1:4:12.04:161,12,0	1/1:10,5:14:26.81:311,27,0	1/1:12,4:15:42.14:554,42,0	1/1:15,1:10:8.77:160,9,0	0/1:7,0:3:31.57:38,0,32	0/1:12,1:13:11.20:410,0,11	1/1:13,4:15:33.83:442,34,0	1/1:7,3:8:8.48:68,8,0	0/0:12,0:12:19.51:0,20,284	0/0:20,0:19:41.86:0,42,517	0/0:14,0:13:19.61:0,20,235	1/1:9,2:9:16.26:203,16,0	0/1:17,0:15:39.34:272,0,39	1/1:10,9:17:3.76:314,4,0	1/1:10,0:5:12.02:144,12,0
chr10	80724744	.	TC	T	5108.88	PASS	AB=0.789;AC=32;AF=0.571;AN=56;BaseQRankSum=8.423;DP=481;FS=0.464;HRun=1;HaplotypeScore=83.2858;InbreedingCoeff=0.3307;MQ=47.05;MQ0=47;MQRankSum=-8.191;QD=14.35;ReadPosRankSum=0.392;VQSLOD=4.1732;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,5:14:22.12:283,22,0	0/1:4,4:8:20.76:147,0,21	0/0:29,0:9:20.90:0,21,259	0/1:42,0:17:11.07:11,0,268	1/1:14,12:25:35.45:402,35,0	0/1:30,0:26:22.95:23,0,73	0/0:14,4:16:5.93:0,6,80	0/1:14,15:26:99:484,0,150	0/0:15,0:15:42.11:0,42,527	1/1:17,4:19:0.90:358,1,0	1/1:9,5:13:14.92:140,15,0	0/0:10,0:9:27.08:0,27,348	1/1:9,6:15:39.12:541,39,0	1/1:3,4:4:12.04:158,12,0	1/1:10,5:14:26.81:311,27,0	1/1:6,10:15:38.99:515,39,0	0/1:13,3:10:15.65:107,0,16	0/0:6,0:2:5.23:0,5,54	0/1:7,7:13:13:338,0,13	1/1:8,9:15:33.83:442,34,0	1/1:8,0:6:2.49:6,2,0	0/0:12,0:12:19.51:0,20,284	0/0:20,0:19:44.87:0,45,558	0/0:15,0:13:21.07:0,21,288	1/1:5,5:9:16.12:203,16,0	0/1:9,9:16:83.72:253,0,84	0/1:14,5:17:47.97:244,0,48	1/1:7,3:5:12.02:144,12,0
chr10	80724783	.	CTCTCTCTGCG	C	1090.93	PASS	AB=0.958;AC=20;AF=0.370;AN=54;BaseQRankSum=3.749;DP=388;FS=5.629;HRun=0;HaplotypeScore=125.0017;InbreedingCoeff=0.3235;MQ=44.21;MQ0=27;MQRankSum=-1.467;QD=5.83;ReadPosRankSum=-0.613;VQSLOD=2.0414;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:16:5.80:0,6,137	0/1:5,0:5:1.06:13,0,1	0/0:14,0:6:15.05:0,15,316	0/0:14,0:8:22.88:0,23,464	1/1:22,0:19:17.83:133,18,0	0/0:17,0:16:4.51:0,5,568	0/0:18,0:16:30.10:0,30,667	1/1:7,0:6:14.71:105,15,0	0/0:15,0:15:45.15:0,45,1175	0/1:18,0:16:99:192,0,197	0/1:18,0:17:0.01:0,0,0	0/0:13,0:12:36.12:0,36,982	0/0:19,0:18:50.09:0,50,754	0/0:11,0:9:22.58:0,23,436	./.	0/1:19,0:19:27.36:123,0,27	0/1:16,0:11:20.09:20,0,20	0/0:5,0:2:4.57:0,5,78	0/1:7,7:11:44.22:246,0,44	1/1:18,0:18:2.94:18,3,0	1/1:10,0:8:2.67:23,3,0	0/0:13,0:13:12:0,12,259	0/0:12,0:11:30.10:0,30,848	0/0:15,0:13:24.03:0,24,753	1/1:5,0:4:5.59:48,6,0	1/1:10,0:9:9.98:131,10,0	0/1:19,0:18:58.59:138,0,59	0/1:6,0:5:7.30:70,0,7
chr10	80724786	.	TCTCTGC	T	2331.55	PASS	AB=0.847;AC=25;AF=0.463;AN=54;BaseQRankSum=5.200;DP=385;FS=0.000;HRun=0;HaplotypeScore=103.7531;InbreedingCoeff=0.6249;MQ=47.80;MQ0=20;MQRankSum=-2.788;QD=12.74;ReadPosRankSum=0.777;VQSLOD=2.2667;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:16:5.81:0,6,97	1/1:0,5:5:3.01:34,3,0	0/0:15,0:7:15.04:0,15,213	0/0:17,0:11:32.06:0,32,399	1/1:22,0:19:18.02:257,18,0	0/0:15,0:15:19.15:0,19,354	0/0:18,0:16:29.45:0,29,410	1/1:7,0:6:14.95:190,15,0	0/0:17,0:17:51.17:0,51,819	0/1:19,0:17:99:311,0,117	0/1:3,17:19:0.01:0,0,0	0/0:12,0:12:36.12:0,36,622	0/0:19,0:19:18.21:0,18,434	0/0:11,0:9:16.09:0,16,275	./.	1/1:18,0:18:4.76:271,5,0	1/1:11,0:8:1.19:151,1,0	0/0:5,0:2:3.89:0,4,31	0/1:14,0:11:14.76:246,0,15	1/1:18,0:18:3.01:36,3,0	1/1:10,0:8:2.91:44,3,0	0/0:13,0:13:15:0,15,214	0/0:12,0:12:33.11:0,33,567	0/0:14,0:13:20.74:0,21,501	1/1:5,0:4:5.62:89,6,0	1/1:10,0:9:26.99:320,27,0	1/1:17,1:17:15.60:445,16,0	1/1:6,0:5:10.58:124,11,0
chr10	80724789	.	CTGCG	C	1425.66	PASS	AB=1.000;AC=26;AF=0.481;AN=54;BaseQRankSum=6.525;DP=392;FS=0.000;HRun=0;HaplotypeScore=99.1820;InbreedingCoeff=0.7587;MQ=48.66;MQ0=19;MQRankSum=-2.013;QD=7.79;ReadPosRankSum=-1.557;VQSLOD=2.3540;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:15:5.80:0,6,136	1/1:5,0:5:2.94:18,3,0	0/0:17,0:8:14.32:0,14,375	0/0:20,0:13:35.46:0,35,641	1/1:20,0:18:17.93:139,18,0	0/0:15,0:15:12.08:0,12,524	0/0:17,0:15:27.09:0,27,586	1/1:7,0:6:14.87:105,15,0	0/0:17,0:17:48.81:0,49,974	1/1:20,1:19:36.98:269,37,0	0/1:20,0:19:0:0,0,0	0/0:12,0:12:26.45:0,26,505	0/0:20,0:20:50.45:0,50,699	0/0:11,0:9:24.04:0,24,499	./.	1/1:18,0:18:17.90:153,18,0	1/1:10,0:7:8.98:74,9,0	0/0:5,0:2:3:0,3,41	1/1:13,1:11:26.88:252,27,0	1/1:17,1:18:2.94:18,3,0	1/1:10,0:8:2.99:24,3,0	0/0:13,0:13:15.01:0,15,327	0/0:13,0:13:36.12:0,36,823	0/0:16,0:15:30.05:0,30,663	1/1:5,0:4:5.86:48,6,0	1/1:10,1:10:29.28:249,29,0	1/1:18,0:17:27.90:204,28,0	0/1:6,0:5:7.30:70,0,7
chr10	80724790	.	TGC	T	2311.85	PASS	AB=1.000;AC=27;AF=0.500;AN=54;BaseQRankSum=5.525;DP=373;FS=1.177;HRun=0;HaplotypeScore=76.3017;InbreedingCoeff=0.7927;MQ=51.75;MQ0=19;MQRankSum=-2.880;QD=13.93;ReadPosRankSum=-1.448;VQSLOD=3.3191;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:15:5.94:0,6,96	1/1:5,0:5:3.01:34,3,0	0/0:20,0:11:24.07:0,24,344	0/0:20,0:13:35.07:0,35,456	1/1:15,2:16:18.06:257,18,0	0/0:15,0:15:2.15:0,2,325	0/0:15,0:13:26.78:0,27,389	1/1:6,1:6:15.01:190,15,0	0/0:17,0:17:14.82:0,15,594	1/1:13,3:14:35.95:421,36,0	0/1:19,0:18:0:0,0,0	0/0:12,0:12:15.85:0,16,313	0/0:19,0:19:50.80:0,51,577	0/0:11,0:9:24.07:0,24,355	./.	1/1:2,11:15:18.04:194,18,0	1/1:9,0:6:9.01:110,9,0	0/0:5,0:2:2.82:0,3,14	1/1:11,2:10:26.97:275,27,0	1/1:3,13:16:3.01:36,3,0	1/1:8,0:7:2.96:45,3,0	0/0:14,0:14:18.01:0,18,264	0/0:13,0:13:36.12:0,36,536	0/0:15,0:14:29.77:0,30,476	1/1:4,0:3:6.02:89,6,0	1/1:11,1:11:32.93:341,33,0	1/1:14,2:16:33.03:395,33,0	1/1:5,1:5:10.58:124,11,0
chr10	80725864	.	TA	T	10230.64	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=11.508;DP=511;FS=3.446;HRun=6;HaplotypeScore=49.9037;InbreedingCoeff=0.9878;MQ=77.56;MQ0=0;MQRankSum=-0.980;QD=27.95;ReadPosRankSum=1.517;VQSLOD=5.4233;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:51.05:532,51,0	1/1:1,9:10:24.06:258,24,0	0/0:15,0:15:29.88:0,30,361	0/0:6,0:6:15.04:0,15,187	1/1:4,36:40:99:1146,108,0	0/0:23,0:23:63.20:0,63,819	0/0:12,0:12:33.07:0,33,391	1/1:3,12:15:36.08:379,36,0	0/0:24,0:24:63.18:0,63,789	1/1:0,31:31:93.22:991,93,0	1/1:1,28:29:78.03:798,78,0	0/0:14,0:14:33.10:0,33,421	1/1:2,19:21:54.14:580,54,0	1/1:0,11:11:33.08:355,33,0	1/1:1,7:8:21.05:226,21,0	1/1:2,19:21:11.65:476,12,0	1/1:1,14:15:42.07:438,42,0	1/1:0,12:12:33.08:354,33,0	1/1:2,23:25:69.13:729,69,0	1/1:4,23:27:69.14:730,69,0	1/1:0,9:9:27.07:290,27,0	0/0:15,0:15:45.14:0,45,579	0/0:29,0:29:78.24:0,78,1012	0/0:7,0:7:21.06:0,21,262	1/1:3,12:15:36.09:387,36,0	1/1:0,19:19:57.14:612,57,0	1/1:1,31:32:75.08:789,75,0	1/1:0,5:5:15.04:161,15,0
chr10	80726791	.	ATAT	A	6546.79	PASS	AC=38;AF=0.704;AN=54;BaseQRankSum=3.834;DP=218;FS=2.360;HRun=0;HaplotypeScore=45.2974;InbreedingCoeff=0.7903;MQ=73.69;MQ0=0;MQRankSum=-1.869;QD=39.20;ReadPosRankSum=3.212;VQSLOD=5.5845;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,7:8:15.05:249,15,0	1/1:0,3:3:9.03:153,9,0	0/0:7,0:7:17.56:0,18,156	0/0:17,0:9:14.38:0,14,200	1/1:2,13:15:35.97:527,36,0	0/0:14,0:14:42.13:0,42,829	0/0:5,0:5:15.05:0,15,316	1/1:0,25:25:72.20:1099,72,0	0/0:1,0:1:3.01:0,3,69	1/1:0,8:8:24.08:401,24,0	1/1:0,5:5:9.03:153,9,0	0/0:2,0:2:6.02:0,6,138	1/1:1,3:4:9.03:153,9,0	1/1:0,2:2:6.02:102,6,0	1/1:0,3:3:6.02:102,6,0	1/1:0,4:4:9.03:153,9,0	1/1:0,14:14:30.10:511,30,0	1/1:2,9:11:15.05:256,15,0	1/1:1,18:19:54.06:832,54,0	1/1:0,5:5:15.05:227,15,0	1/1:0,1:1:3.01:51,3,0	./.	0/0:4,0:4:9.01:0,9,162	0/0:1,0:1:3.01:0,3,40	1/1:1,7:8:15.05:256,15,0	1/1:0,6:6:18.06:281,18,0	1/1:0,12:12:27.09:460,27,0	1/1:0,13:14:36.04:580,36,0
chr10	80729090	.	AT	A	750.82	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.506;DP=490;FS=13.441;HRun=6;HaplotypeScore=47.1509;InbreedingCoeff=0.9860;MQ=79.57;MQ0=0;MQRankSum=-2.261;QD=20.86;ReadPosRankSum=1.245;VQSLOD=1.9190;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39.11:0,39,497	0/0:7,0:7:21.07:0,21,276	0/0:18,0:18:37.93:0,38,467	0/0:9,1:10:18.06:0,18,226	0/0:25,0:25:72.23:0,72,946	1/1:0,23:23:63.16:677,63,0	1/1:3,10:13:18.04:193,18,0	0/0:30,0:30:81.26:0,81,1053	0/0:14,0:14:39.13:0,39,513	0/0:27,0:27:78.21:0,78,1003	0/0:26,0:26:66.21:0,66,868	0/0:18,0:18:48.14:0,48,616	0/0:16,0:16:42.14:0,42,552	0/0:16,0:16:45.13:0,45,565	0/0:12,0:12:36.12:0,36,474	0/0:15,0:15:45.15:0,45,592	0/0:17,0:17:48.08:0,48,593	0/0:8,0:8:21.07:0,21,276	0/0:17,0:17:45.15:0,45,592	0/0:33,0:33:90.29:0,90,1183	0/0:19,0:19:48.16:0,48,632	0/0:12,0:12:36.12:0,36,473	0/0:16,0:16:45.15:0,45,592	0/0:17,0:17:42.12:0,42,538	0/0:16,0:16:48.13:0,48,615	0/0:21,0:21:60.19:0,60,780	0/0:19,0:19:54.18:0,54,706	0/0:11,0:11:23.11:0,23,282
chr10	80729267	.	A	ATT	4858.47	PASS	AB=0.571;AC=31;AF=0.554;AN=56;BaseQRankSum=-2.455;DP=447;FS=2.710;HRun=13;HaplotypeScore=64.0592;InbreedingCoeff=0.8285;MQ=69.32;MQ0=2;MQRankSum=-0.634;QD=18.54;ReadPosRankSum=-3.575;VQSLOD=3.2088;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:12:29.45:0,29,235	1/1:1,8:9:15.05:204,15,0	0/0:4,0:4:2.97:0,3,26	0/0:6,0:7:8.54:0,9,55	1/1:6,14:23:45.77:490,46,0	0/0:23,0:28:50.34:0,50,523	0/0:12,0:12:20.92:0,21,185	1/1:12,11:25:9.59:364,10,0	0/0:15,0:14:23.86:0,24,211	1/1:5,5:19:32.01:314,32,0	1/1:4,10:16:31.70:348,32,0	0/0:16,0:17:14.24:0,14,117	0/0:18,0:19:41.56:0,42,355	0/0:19,0:21:20.24:0,20,214	1/1:2,9:14:17.54:200,18,0	1/1:4,10:14:21.03:261,21,0	1/1:0,4:5:9.03:122,9,0	1/1:3,0:3:5.98:58,6,0	1/1:7,13:22:24.09:490,24,0	1/1:1,14:17:21.65:408,22,0	0/1:3,3:12:6.39:148,0,6	0/0:18,0:18:38.87:0,39,343	0/0:19,0:22:38:0,38,299	0/0:8,0:10:2.63:0,3,110	1/1:2,20:28:52.63:625,53,0	1/1:4,13:19:41.60:515,42,0	1/1:9,14:25:23.78:231,24,0	1/1:5,3:7:6.02:82,6,0
chr10	80729916	.	TA	T	8189.80	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=10.260;DP=477;FS=0.878;HRun=8;HaplotypeScore=60.7507;InbreedingCoeff=0.9915;MQ=68.36;MQ0=1;MQRankSum=-3.035;QD=23.27;ReadPosRankSum=1.133;VQSLOD=5.5194;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:54.08:521,54,0	1/1:1,6:7:18.03:174,18,0	0/0:15,0:12:29.91:0,30,286	0/0:10,0:8:16.23:0,16,166	1/1:3,23:26:63.09:607,63,0	0/0:16,0:16:45.13:0,45,534	0/0:6,0:6:12.95:0,13,178	1/1:7,20:27:56.83:550,57,0	0/0:18,0:18:48.15:0,48,580	1/1:3,16:19:48.08:463,48,0	1/1:4,23:27:66.10:637,66,0	0/0:16,0:16:36.11:0,36,435	1/1:1,13:14:36.06:348,36,0	1/1:1,14:15:36.06:347,36,0	1/1:0,17:17:36.06:348,36,0	1/1:2,11:13:30.05:290,30,0	1/1:2,13:15:27.04:261,27,0	1/1:3,21:24:60.09:579,60,0	1/1:2,19:21:57.07:544,57,0	1/1:4,22:26:57.08:550,57,0	1/1:0,8:8:21.03:203,21,0	0/0:17,0:17:45.14:0,45,544	0/0:16,0:16:42.10:0,42,493	0/0:11,0:11:27.08:0,27,326	1/1:1,16:17:45.07:435,45,0	1/1:3,18:21:54.09:522,54,0	1/1:4,21:25:57.08:550,57,0	1/1:0,10:10:27.04:261,27,0
chr10	80730303	.	G	GAAA	12083.34	PASS	AB=0.900;AC=39;AF=0.696;AN=56;BaseQRankSum=10.830;DP=355;FS=3.689;HRun=6;HaplotypeScore=93.4021;InbreedingCoeff=0.8274;MQ=59.11;MQ0=0;MQRankSum=-10.264;QD=44.59;ReadPosRankSum=-3.011;VQSLOD=4.1551;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,4:7:15.04:280,15,0	1/1:4,2:6:6.02:127,6,0	0/1:8,0:8:27.76:28,0,182	0/0:11,0:9:20.66:0,21,266	1/1:10,17:27:60.11:1114,60,0	0/0:15,0:15:42.14:0,42,596	0/0:4,0:4:9.03:0,9,128	1/1:7,9:16:30.57:587,31,0	0/0:13,0:13:39.12:0,39,536	1/1:6,13:19:51.13:985,51,0	1/1:5,12:17:45.15:928,45,0	0/0:15,0:15:42.14:0,42,595	1/1:3,8:11:15.05:317,15,0	1/1:1,8:9:24.08:506,24,0	1/1:3,9:12:33.11:673,33,0	1/1:0,8:8:24.08:507,24,0	1/1:3,1:4:3.01:63,3,0	1/1:3,4:8:17.93:294,18,0	1/1:14,8:22:45.15:889,45,0	1/1:5,12:19:57.18:1067,57,0	1/1:2,2:4:6.02:127,6,0	0/0:5,0:5:9.02:0,9,128	0/0:16,0:16:48.16:0,48,681	0/0:5,0:5:15.05:0,15,211	1/1:4,13:20:51.16:956,51,0	1/1:3,12:15:39.13:791,39,0	1/1:11,15:25:66.21:1272,66,0	1/1:6,6:12:30.10:573,30,0
chr10	80730327	.	T	TAA	5137.55	PASS	AB=0.755;AC=39;AF=0.722;AN=54;BaseQRankSum=5.999;DP=365;FS=8.960;HRun=12;HaplotypeScore=103.9434;InbreedingCoeff=0.5990;MQ=67.55;MQ0=1;MQRankSum=-7.802;QD=17.24;ReadPosRankSum=-0.366;VQSLOD=3.2458;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:7:7.49:26,7,0	./.	0/1:22,0:15:36.84:37,0,100	0/0:11,0:8:8.89:0,9,83	1/1:8,12:25:44.38:458,44,0	1/1:3,1:17:6.20:110,6,0	1/1:0,0:4:7.49:26,7,0	1/1:14,4:18:24.70:357,25,0	0/0:11,0:11:29.99:0,30,276	1/1:10,7:17:24.05:316,24,0	1/1:4,15:19:33.11:457,33,0	0/0:12,0:13:29.73:0,30,257	0/1:5,0:9:8.87:55,0,9	1/1:5,0:8:0.36:23,0,0	1/1:2,7:10:24.08:328,24,0	1/1:6,2:7:9.02:113,9,0	0/1:2,5:8:15.73:114,0,16	1/1:0,6:5:12.04:168,12,0	1/1:13,7:20:36.62:438,37,0	1/1:4,16:22:53.57:663,54,0	1/1:1,4:5:2.96:20,3,0	0/0:5,0:6:17.73:0,18,141	0/0:18,0:18:32.99:0,33,326	0/0:6,0:6:15.01:0,15,139	1/1:13,5:20:19.22:309,19,0	1/1:12,5:17:27.02:326,27,0	1/1:5,18:23:47.58:586,48,0	1/1:4,5:9:15.05:210,15,0
chr10	80730449	.	T	TTA	9592.22	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=5.011;DP=375;FS=0.929;HRun=0;HaplotypeScore=70.1617;InbreedingCoeff=0.9613;MQ=73.21;MQ0=0;MQRankSum=-2.472;QD=39.31;ReadPosRankSum=0.022;VQSLOD=6.2146;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:33.11:0,33,424	1/1:0,4:4:12.04:202,12,0	0/0:10,0:10:14.62:0,15,190	0/0:8,0:8:12.02:0,12,130	1/1:0,18:19:48.16:803,48,0	0/0:22,0:22:51.17:0,51,656	0/0:4,0:4:12.04:0,12,154	1/1:9,22:32:69.22:1138,69,0	0/0:14,0:14:30.10:0,30,386	1/1:0,23:23:69.24:1163,69,0	1/1:3,18:21:39.13:658,39,0	0/0:16,0:16:42.14:0,42,540	0/0:14,0:14:39.10:0,39,485	0/0:9,0:9:27.07:0,27,333	1/1:2,12:14:33.11:556,33,0	1/1:3,9:12:21.07:354,21,0	1/1:2,9:11:24.08:405,24,0	1/1:0,2:2:6.02:101,6,0	1/1:4,12:16:42.14:687,42,0	1/1:5,21:26:63.21:1049,63,0	1/1:2,10:12:24.08:405,24,0	0/0:4,0:4:12.04:0,12,154	0/0:11,0:11:21.07:0,21,270	0/0:7,0:7:18.06:0,18,230	1/1:1,9:10:24.08:405,24,0	1/1:2,13:15:39.13:658,39,0	1/1:4,13:16:42.14:706,42,0	1/1:2,8:10:18.06:303,18,0
chr10	80734897	.	GGT	G	113.19	PASS	AB=0.976;AC=16;AF=0.364;AN=44;BaseQRankSum=5.178;DP=496;FS=0.000;HRun=0;HaplotypeScore=91.5375;InbreedingCoeff=0.0404;MQ=65.03;MQ0=17;MQRankSum=-3.467;QD=0.52;ReadPosRankSum=-1.332;VQSLOD=1.3711;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:2.47:0,2,21	./.	./.	./.	./.	0/1:17,0:17:1.44:1,0,35	0/0:27,0:27:11.87:0,12,103	./.	0/0:17,0:16:9.01:0,9,112	0/1:21,0:21:3.37:3,0,14	0/0:9,0:7:2.99:0,3,24	0/1:15,1:16:16.76:17,0,141	1/1:21,0:21:17.21:70,17,0	0/1:14,0:13:15.23:16,0,15	1/1:17,0:17:2.74:12,3,0	0/1:18,0:18:14.19:15,0,14	0/1:22,0:22:14.23:16,0,14	1/1:18,0:15:2.66:11,3,0	0/0:11,0:11:2.92:0,3,8	./.	0/0:34,0:33:2.56:0,3,26	0/0:15,0:15:11.69:0,12,95	0/0:14,0:14:7.58:0,8,91	0/1:22,4:24:13.75:14,0,178	1/1:12,0:12:8.16:34,8,0	0/0:23,0:23:5.38:0,5,48	0/1:15,0:14:30.48:39,0,30	0/0:9,0:9:8.76:0,9,56
chr10	80734945	.	TGTGTGC	T	1802.27	PASS	AB=1.000;AC=26;AF=0.500;AN=52;BaseQRankSum=4.914;DP=513;FS=4.986;HRun=0;HaplotypeScore=97.4764;InbreedingCoeff=0.4763;MQ=58.43;MQ0=25;MQRankSum=0.073;QD=6.96;ReadPosRankSum=-0.865;VQSLOD=1.5419;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:2.92:0,3,17	1/1:6,0:4:5.90:46,6,0	0/0:24,0:11:15.82:0,16,193	0/1:34,0:20:36.31:36,0,148	./.	0/0:20,0:20:5.15:0,5,76	0/0:28,0:27:2.98:0,3,76	1/1:25,0:24:18.37:378,18,0	0/0:12,0:10:14.67:0,15,256	1/1:16,0:14:29.64:220,30,0	1/1:8,0:7:14.96:117,15,0	0/0:25,0:25:53.73:0,54,859	1/1:19,2:21:18.55:438,19,0	1/1:13,2:14:26.81:295,27,0	1/1:15,0:15:2.94:18,3,0	1/1:20,0:20:1.39:29,1,0	0/0:21,0:21:2.34:0,2,21	0/1:14,0:12:11.88:12,0,27	0/1:12,0:12:58.81:84,0,59	./.	0/1:38,0:37:15:15,0,68	0/0:8,0:8:9.03:0,9,170	0/0:14,0:13:24:0,24,385	0/0:37,0:35:71:0,71,964	1/1:13,0:13:8.64:46,9,0	1/1:15,1:15:10:204,10,0	0/0:17,0:17:15.72:0,16,197	1/1:6,0:6:5.97:45,6,0
chr10	80734947	.	TGTGC	T	2475.33	PASS	AB=0.940;AC=33;AF=0.635;AN=52;BaseQRankSum=4.479;DP=507;FS=2.345;HRun=0;HaplotypeScore=82.7713;InbreedingCoeff=0.3220;MQ=60.10;MQ0=24;MQRankSum=0.216;QD=6.67;ReadPosRankSum=-0.134;VQSLOD=1.5829;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:27:2.99:24,3,0	1/1:5,0:3:5.64:46,6,0	0/0:25,0:12:18.82:0,19,218	0/1:34,0:20:36.31:36,0,147	./.	0/1:20,0:20:16.57:17,0,41	0/1:26,0:25:3.87:4,0,45	1/1:26,0:25:34.52:440,35,0	0/0:12,0:10:17.50:0,17,231	1/1:4,12:14:32.90:287,33,0	1/1:8,0:7:14.96:117,15,0	0/0:23,0:23:53.67:0,54,682	1/1:18,3:21:49.28:521,49,0	1/1:15,0:14:29.97:298,30,0	1/1:14,1:15:3.01:56,3,0	1/1:5,14:19:2.85:144,3,0	1/1:22,1:23:1.25:4,1,0	0/1:4,11:13:7.56:51,0,8	0/1:10,0:10:33.89:84,0,34	./.	0/1:35,0:35:27.35:40,0,27	0/0:8,0:8:12:0,12,117	0/0:14,0:13:23.56:0,24,274	0/0:37,0:35:76.94:0,77,808	1/1:1,11:12:9.03:169,9,0	1/1:15,1:15:30.64:251,31,0	0/1:21,0:21:19.93:20,0,79	1/1:6,0:6:5.97:45,6,0
chr10	80734949	.	TGC	T	2230.79	PASS	AB=0.986;AC=34;AF=0.654;AN=52;BaseQRankSum=5.473;DP=492;FS=1.702;HRun=0;HaplotypeScore=69.8953;InbreedingCoeff=0.3712;MQ=60.76;MQ0=22;MQRankSum=-0.205;QD=6.15;ReadPosRankSum=-0.003;VQSLOD=3.0426;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:27:2.99:24,3,0	1/1:5,0:3:5.90:46,6,0	0/0:25,0:12:18.82:0,19,218	0/1:34,0:20:36.31:36,0,147	./.	0/1:20,0:20:15.21:17,0,15	0/1:24,1:24:3.88:4,0,19	1/1:5,20:24:41.57:445,42,0	0/0:12,0:10:16.87:0,17,182	1/1:15,0:13:32.88:256,33,0	1/1:8,0:7:14.96:117,15,0	0/0:22,0:22:44.59:0,45,520	1/1:20,0:20:49.38:394,49,0	1/1:16,0:15:32.90:262,33,0	1/1:17,0:17:5.99:50,6,0	1/1:16,0:16:8.95:69,9,0	1/1:5,18:23:3.95:47,4,0	1/1:15,0:13:5.98:47,6,0	0/1:11,0:11:8.34:103,0,8	./.	0/1:33,0:33:4.23:40,0,4	0/0:8,0:8:2.36:0,2,24	0/0:12,0:11:3.97:0,4,192	0/0:34,0:33:65.59:0,66,636	1/1:11,0:11:8.99:75,9,0	1/1:15,0:15:31.70:250,32,0	0/1:20,1:21:10.64:74,0,11	1/1:5,0:5:5.97:45,6,0
chr10	80734951	.	C	CGT	3446.40	PASS	AB=0.711;AC=35;AF=0.700;AN=50;BaseQRankSum=2.376;DP=483;FS=0.545;HRun=0;HaplotypeScore=68.7624;InbreedingCoeff=0.6650;MQ=62.71;MQ0=18;MQRankSum=-1.222;QD=11.45;ReadPosRankSum=0.573;VQSLOD=3.3232;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:5,0:3:6.02:96,6,0	0/0:25,0:12:32.82:0,33,387	0/0:35,0:21:54.46:0,54,572	./.	0/1:6,13:20:0:0,0,0	0/1:4,19:23:0:0,0,0	1/1:26,0:25:60.19:869,60,0	0/0:10,0:9:18.06:0,18,231	1/1:14,0:13:33.10:438,33,0	1/1:6,0:6:15.05:234,15,0	0/0:22,0:22:57.18:0,57,744	1/1:21,0:21:34.27:365,34,0	1/1:14,0:13:32.42:391,32,0	1/1:17,0:17:5.84:39,6,0	1/1:17,0:17:5.24:23,5,0	1/1:21,0:21:2.16:8,2,0	1/1:14,1:13:5.85:44,6,0	1/1:10,0:10:21.03:259,21,0	./.	1/1:7,27:34:2.74:12,3,0	0/1:8,0:8:31.01:70,0,31	0/0:11,0:11:18.06:0,18,239	0/0:31,0:30:75.24:0,75,966	1/1:11,0:11:5.94:22,6,0	1/1:15,0:15:30.09:439,30,0	1/1:5,14:20:8.55:54,9,0	1/1:3,0:3:6.02:81,6,0
chr10	80734956	.	G	GTG	3609.62	PASS	AB=1.000;AC=37;AF=0.712;AN=52;BaseQRankSum=2.243;DP=488;FS=1.135;HRun=0;HaplotypeScore=77.5054;InbreedingCoeff=0.6450;MQ=71.89;MQ0=12;MQRankSum=-1.681;QD=11.11;ReadPosRankSum=-0.764;VQSLOD=3.2618;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:0:0,0,0	1/1:4,0:3:6.02:96,6,0	0/0:29,0:16:32.82:0,33,387	0/0:40,0:26:54.46:0,54,572	./.	1/1:19,0:19:2.89:26,3,0	0/1:22,0:21:0:0,0,0	1/1:28,0:27:63.20:902,63,0	0/0:13,0:13:18.06:0,18,231	1/1:17,0:17:33.10:438,33,0	1/1:9,0:9:15.05:234,15,0	0/0:21,0:21:57.15:0,57,744	1/1:19,0:19:34.27:365,34,0	1/1:14,0:14:32.42:391,32,0	1/1:4,11:16:5.84:39,6,0	1/1:19,0:19:5.24:23,5,0	1/1:18,0:18:5.38:39,5,0	1/1:11,0:11:5.85:44,6,0	1/1:10,0:10:23.90:333,24,0	./.	1/1:33,0:33:2.74:12,3,0	0/1:8,0:8:31.01:70,0,31	0/0:10,0:10:9.48:0,9,228	0/0:28,0:27:75.24:0,75,966	1/1:11,0:11:5.94:22,6,0	1/1:15,0:15:30.09:439,30,0	1/1:19,0:19:8.55:54,9,0	1/1:3,0:3:6.02:81,6,0
chr10	80736873	.	AG	A	2770.22	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.880;DP=587;FS=2.703;HRun=4;HaplotypeScore=86.5842;InbreedingCoeff=0.9969;MQ=66.69;MQ0=0;MQRankSum=-1.278;QD=30.78;ReadPosRankSum=3.950;VQSLOD=4.0468;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,47:47:99:1440,120,0	0/0:6,0:6:18.06:0,18,252	0/0:20,0:20:57.14:0,57,733	0/0:24,0:24:67.67:0,68,832	0/0:18,0:18:45.14:0,45,614	0/0:13,0:13:39.12:0,39,529	0/0:19,0:19:48.12:0,48,622	0/0:30,0:30:87.27:0,87,1188	0/0:13,0:13:39.13:0,39,541	0/0:22,0:22:63.17:0,63,858	0/0:15,0:15:42.14:0,42,586	0/0:16,0:16:48.15:0,48,655	1/1:1,18:19:51.16:610,51,0	1/1:0,24:24:72.22:864,72,0	0/0:29,0:29:81.27:0,81,1134	0/0:15,0:15:45.15:0,45,630	0/0:24,0:24:69.16:0,69,921	0/0:23,0:23:64.50:0,65,919	0/0:21,0:21:60.18:0,60,821	0/0:13,0:13:39.13:0,39,545	0/0:35,0:35:99:0,102,1428	0/0:19,0:19:54.17:0,54,740	0/0:12,0:12:33.11:0,33,462	0/0:28,0:28:78.26:0,78,1079	0/0:25,0:25:66.15:0,66,899	0/0:18,0:18:54.18:0,54,755	0/0:20,0:19:60.19:0,60,823	0/0:19,0:19:57.12:0,57,740
chr10	80737068	.	TG	T	635.54	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.728;DP=488;FS=3.153;HRun=1;HaplotypeScore=142.0192;InbreedingCoeff=0.9656;MQ=63.86;MQ0=0;MQRankSum=1.615;QD=31.78;ReadPosRankSum=0.871;VQSLOD=3.4145;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.25:0,72,1145	0/0:11,0:11:33.06:0,33,498	0/0:14,0:11:23.30:0,23,402	0/0:5,0:6:15.02:0,15,180	0/0:26,0:26:78.25:0,78,1219	1/1:0,14:14:39.13:544,39,0	1/1:0,6:6:15.05:210,15,0	0/0:32,0:31:93.20:0,93,1385	0/0:13,0:13:39.13:0,39,622	0/0:24,0:24:72.24:0,72,1131	0/0:31,0:31:93.29:0,93,1459	0/0:12,0:12:36.12:0,36,573	0/0:17,0:17:51.14:0,51,767	0/0:14,0:14:42.13:0,42,647	0/0:18,0:18:54.18:0,54,860	0/0:12,0:12:36.10:0,36,531	0/0:18,0:18:51.17:0,51,806	0/0:17,0:17:48.16:0,48,766	0/0:12,0:12:30.10:0,30,480	0/0:24,0:24:72.20:0,72,1077	0/0:4,0:4:12.02:0,12,168	0/0:17,0:17:51.17:0,51,811	0/0:25,0:25:72.19:0,72,1077	0/0:10,0:10:30.09:0,30,455	0/0:22,0:22:66.20:0,66,1007	0/0:32,0:32:96.31:0,96,1475	0/0:24,0:24:72.18:0,72,1115	0/0:9,0:9:27.06:0,27,384
chr10	80737471	.	G	GA	11393.72	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-10.549;DP=643;FS=5.725;HRun=8;HaplotypeScore=66.0735;InbreedingCoeff=0.9834;MQ=78.29;MQ0=0;MQRankSum=-1.211;QD=26.37;ReadPosRankSum=-2.610;VQSLOD=4.6647;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.03:0,60,549	1/1:1,12:13:30.07:345,30,0	0/0:21,0:22:26.75:0,27,238	0/0:15,0:15:21.82:0,22,262	1/1:2,17:19:48.10:539,48,0	1/1:3,0:25:42.57:215,43,0	1/1:0,0:26:62.50:318,62,0	1/1:4,33:37:93.24:1051,93,0	0/0:29,0:29:78.04:0,78,714	1/1:4,38:42:99:1259,111,0	1/1:4,18:22:29.87:596,30,0	0/0:28,0:28:69.03:0,69,632	0/0:22,0:22:60.03:0,60,549	0/0:12,0:12:27:0,27,242	1/1:4,25:29:75.22:866,75,0	1/1:3,15:18:45.13:519,45,0	1/1:4,17:21:30.03:580,30,0	1/1:6,14:19:42.12:482,42,0	1/1:2,23:25:69.20:789,69,0	1/1:5,24:29:72.12:789,72,0	1/1:2,13:15:36.11:415,36,0	0/0:23,0:23:59.99:0,60,538	0/0:20,0:20:57.01:0,57,516	0/0:18,0:18:45.02:0,45,412	1/1:2,17:19:36.11:415,36,0	1/1:4,32:36:96.29:1108,96,0	1/1:1,32:33:90.27:1039,90,0	1/1:1,2:3:6.02:69,6,0
chr10	80737776	.	ACC	A	3491.52	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=4.941;DP=409;FS=12.888;HRun=2;HaplotypeScore=85.0662;InbreedingCoeff=0.4837;MQ=69.96;MQ0=4;MQRankSum=-5.136;QD=14.79;ReadPosRankSum=-0.966;VQSLOD=-0.5233;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:37.97:38,0,122	1/1:4,0:4:8.96:71,9,0	0/0:34,0:21:49.26:0,49,630	0/0:29,0:23:42.38:0,42,601	1/1:11,0:11:20.97:180,21,0	1/1:0,17:17:35.91:544,36,0	1/1:5,5:12:32.08:380,32,0	1/1:11,0:11:13.76:241,14,0	0/0:20,0:20:59.70:0,60,730	0/1:20,0:20:15.20:240,0,15	1/1:11,0:11:24.34:171,24,0	0/0:20,0:20:48.32:0,48,917	0/1:14,0:14:57.55:58,0,64	0/1:19,0:19:69.45:69,0,109	1/1:10,0:10:25.42:190,25,0	0/1:9,0:9:35.03:124,0,35	1/1:5,0:5:14.84:104,15,0	0/1:5,0:5:34.14:34,0,40	1/1:7,0:7:5.77:79,6,0	1/1:13,0:13:29.83:229,30,0	1/1:8,0:8:15.46:97,15,0	0/0:20,0:20:60.06:0,60,812	0/0:25,0:25:62.43:0,62,1161	0/0:25,0:23:50.60:0,51,941	1/1:9,0:9:3.41:122,3,0	1/1:15,0:15:28.27:226,28,0	1/1:14,0:14:26.17:170,26,0	1/1:7,0:7:17.25:126,17,0
chr10	80737777	.	CCA	C	951.98	PASS	AB=1.000;AC=9;AF=0.180;AN=50;BaseQRankSum=5.251;DP=428;FS=0.717;HRun=0;HaplotypeScore=97.3299;InbreedingCoeff=0.6436;MQ=66.13;MQ0=4;MQRankSum=3.055;QD=12.20;ReadPosRankSum=3.306;VQSLOD=3.4044;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,5:15:15.02:176,15,0	./.	0/0:32,0:20:17.62:0,18,189	0/0:28,0:22:9.49:0,9,266	./.	1/1:18,0:18:32.79:244,33,0	0/1:12,0:12:3.88:109,0,4	0/0:15,0:13:9.38:0,9,78	0/0:19,0:19:23.28:0,23,411	0/0:21,0:21:27.24:0,27,238	0/0:12,0:12:5.76:0,6,43	0/0:20,1:21:9.95:0,10,577	1/1:7,7:14:24.07:280,24,0	1/1:11,7:19:26.91:295,27,0	0/0:11,0:11:2.99:0,3,24	0/0:12,0:12:5.82:0,6,62	./.	0/0:5,0:5:9.03:0,9,117	0/0:12,0:12:20:0,20,166	0/0:12,0:12:0:0,0,0	0/0:9,0:8:2.98:0,3,21	0/0:21,0:21:27.09:0,27,423	0/0:23,2:25:21.98:0,22,759	0/0:24,3:25:6.78:0,7,578	0/0:11,0:10:3.01:0,3,45	0/0:15,0:15:17.71:0,18,115	0/0:13,0:13:20.66:0,21,134	0/0:7,0:7:5.98:0,6,46
chr10	80737906	.	CAG	C	2053.12	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-1.486;DP=484;FS=6.313;HRun=0;HaplotypeScore=108.8373;InbreedingCoeff=0.9684;MQ=90.39;MQ0=1;MQRankSum=-2.582;QD=36.02;ReadPosRankSum=1.573;VQSLOD=5.5236;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:18:54.18:794,54,0	0/0:4,0:4:12.04:0,12,224	0/0:24,0:24:61.50:0,61,1136	0/0:18,0:18:54.18:0,54,959	0/0:15,0:15:33.11:0,33,608	0/0:13,0:13:39.13:0,39,723	0/0:18,0:18:51.17:0,51,929	0/0:20,0:20:57.20:0,57,1058	0/0:30,0:30:87.28:0,87,1598	0/0:17,0:17:48.16:0,48,868	0/0:10,0:10:30.09:0,30,525	0/0:22,0:22:66.23:0,66,1236	1/1:1,21:21:54.18:789,54,0	1/1:0,16:15:42.14:612,42,0	0/0:23,0:23:69.24:0,69,1291	0/0:12,0:12:36.12:0,36,673	0/0:17,0:17:48.16:0,48,880	0/0:4,0:4:9.03:0,9,169	0/0:27,0:27:75.25:0,75,1351	0/0:14,0:14:42.14:0,42,781	0/0:14,0:14:36.12:0,36,644	0/0:21,0:21:63.22:0,63,1177	0/0:20,0:20:60.21:0,60,1090	0/0:18,0:18:54.19:0,54,1011	0/0:11,0:11:33.11:0,33,599	0/0:16,0:16:45.15:0,45,813	0/0:29,0:29:84.27:0,84,1498	0/0:10,0:10:30.10:0,30,557
chr10	80738211	.	TG	T	4072.73	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=13.698;DP=354;FS=4.501;HRun=1;HaplotypeScore=104.3929;InbreedingCoeff=0.9801;MQ=71.34;MQ0=0;MQRankSum=-14.043;QD=20.78;ReadPosRankSum=0.723;VQSLOD=3.8016;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.14:0,54,764	1/1:1,4:5:11.99:100,12,0	0/0:16,0:16:45.11:0,45,613	0/0:10,0:9:26.55:0,27,322	1/1:5,11:16:29.86:233,30,0	1/1:2,13:15:41.93:347,42,0	1/1:2,10:12:23.97:200,24,0	1/1:4,14:18:45.37:371,45,0	0/0:18,0:18:54.17:0,54,786	1/1:3,17:19:50.73:412,51,0	1/1:0,10:10:29.94:243,30,0	0/0:15,0:15:45.12:0,45,633	0/0:26,0:26:78.25:0,78,1146	0/0:12,0:12:36.12:0,36,538	1/1:1,11:12:35.95:298,36,0	1/1:1,8:9:26.97:224,27,0	1/1:2,6:8:17.98:150,18,0	1/1:2,7:9:16.74:148,17,0	1/1:4,11:15:43.04:352,43,0	1/1:4,3:7:14.93:115,15,0	1/1:2,5:7:15.43:122,15,0	0/0:16,0:16:48.15:0,48,698	0/0:20,0:20:57.01:0,57,782	0/0:6,0:6:18.06:0,18,269	1/1:1,7:8:20.98:175,21,0	1/1:2,5:7:20.96:175,21,0	1/1:4,10:14:38.46:308,38,0	1/1:0,4:4:11.99:101,12,0
chr10	80738216	.	TTTA	T	4976.22	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=12.255;DP=364;FS=1.975;HRun=0;HaplotypeScore=114.6334;InbreedingCoeff=0.9696;MQ=66.88;MQ0=0;MQRankSum=-13.909;QD=24.27;ReadPosRankSum=0.908;VQSLOD=5.0451;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:51.17:0,51,1111	1/1:0,4:4:12.03:129,12,0	0/0:15,0:15:36.10:0,36,742	0/0:10,0:7:17.99:0,18,349	1/1:4,11:15:38.52:368,39,0	1/1:5,13:18:42.10:450,42,0	1/1:2,10:12:24.06:259,24,0	1/1:8,14:22:45.53:474,46,0	0/0:18,0:18:51.14:0,51,1040	1/1:5,17:21:50.44:524,50,0	1/1:2,10:12:30.07:318,30,0	0/0:14,0:14:39.13:0,39,860	0/0:27,0:27:81.26:0,81,1695	0/0:13,0:13:39.13:0,39,858	1/1:0,11:11:33.08:353,33,0	1/1:0,8:8:24.06:260,24,0	1/1:2,6:8:14.59:161,15,0	1/1:2,7:9:15.04:167,15,0	1/1:6,11:17:41.88:413,42,0	1/1:3,3:6:9.02:97,9,0	1/1:5,5:10:16.77:142,17,0	0/0:16,0:16:48.16:0,48,1043	0/0:20,0:20:51.07:0,51,1066	0/0:6,0:6:18.06:0,18,386	1/1:1,7:8:21.05:226,21,0	1/1:2,5:7:15.04:164,15,0	1/1:2,10:12:32.76:339,33,0	1/1:0,4:4:12.03:131,12,0
chr10	80738218	.	TA	T	3670.39	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=12.836;DP=343;FS=3.829;HRun=1;HaplotypeScore=99.1240;InbreedingCoeff=0.9791;MQ=63.94;MQ0=0;MQRankSum=-14.220;QD=19.32;ReadPosRankSum=0.499;VQSLOD=3.8879;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.17:0,51,725	1/1:4,0:4:11.90:85,12,0	0/0:14,0:13:35.91:0,36,496	0/0:9,0:6:18.04:0,18,237	1/1:12,3:15:41.48:277,41,0	1/1:16,0:16:47.68:353,48,0	1/1:10,0:10:23.81:170,24,0	1/1:21,0:21:53.63:390,54,0	0/0:18,0:18:54.13:0,54,716	1/1:17,2:18:50.36:364,50,0	1/1:10,2:12:29.71:207,30,0	0/0:13,0:13:39.13:0,39,557	0/0:28,0:28:84.22:0,84,1124	0/0:13,0:13:39.13:0,39,556	1/1:11,0:11:32.72:231,33,0	1/1:8,0:8:23.82:172,24,0	1/1:7,0:7:17.84:125,18,0	1/1:7,0:7:14.92:112,15,0	1/1:16,0:16:44.58:319,45,0	1/1:6,0:6:14.93:116,15,0	1/1:9,0:9:20.80:144,21,0	0/0:16,0:16:48.15:0,48,668	0/0:18,0:18:51.02:0,51,683	0/0:6,0:6:18.06:0,18,254	1/1:8,0:8:23.80:169,24,0	1/1:6,0:6:17.87:129,18,0	1/1:11,0:11:31.05:220,31,0	1/1:4,0:4:11.91:86,12,0
chr10	80738698	.	A	AAAC	16655.55	PASS	AB=0.841;AC=33;AF=0.589;AN=56;BaseQRankSum=-15.994;DP=612;FS=8.096;HRun=0;HaplotypeScore=86.8222;InbreedingCoeff=0.7803;MQ=75.16;MQ0=0;MQRankSum=-4.972;QD=43.37;ReadPosRankSum=2.230;VQSLOD=6.3995;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:78.21:0,78,1342	1/1:0,6:6:18.06:401,18,0	0/0:50,0:49:99:0,112,1744	0/0:24,0:24:63.21:0,63,959	1/1:1,34:35:93.27:1935,93,0	0/1:25,0:25:23.42:23,0,177	0/1:16,0:16:16.04:16,0,108	1/1:6,24:31:75.10:1209,75,0	0/0:15,0:15:39.12:0,39,612	1/1:2,28:31:77.98:1508,78,0	1/1:2,13:15:36.12:769,36,0	0/0:12,0:12:36.12:0,36,575	0/0:17,0:17:45.15:0,45,727	0/0:15,0:15:45.14:0,45,703	1/1:0,13:13:33.11:737,33,0	0/1:1,11:12:15.90:637,0,16	1/1:0,26:26:69.24:1539,69,0	1/1:7,22:31:58.75:1246,59,0	1/1:2,17:20:53.72:931,54,0	1/1:2,16:18:39.13:808,39,0	1/1:2,13:16:30.10:669,30,0	0/0:20,0:20:57.19:0,57,924	0/0:15,0:15:45.13:0,45,672	0/0:26,0:26:63.12:0,63,1058	1/1:1,24:25:54.19:1204,54,0	1/1:1,17:18:51.12:1030,51,0	1/1:2,31:33:61.26:1594,61,0	1/1:4,8:12:18.06:399,18,0
chr10	80739450	.	CT	C	5117.81	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=18.328;DP=507;FS=5.610;HRun=1;HaplotypeScore=176.3126;InbreedingCoeff=0.9847;MQ=81.10;MQ0=0;MQRankSum=-17.311;QD=19.46;ReadPosRankSum=1.888;VQSLOD=4.9489;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,2158	1/1:1,7:8:23.74:184,24,0	0/0:22,0:22:45.79:0,46,797	0/0:15,0:15:45.11:0,45,660	1/1:1,26:27:55.65:380,56,0	1/1:0,13:13:38.58:276,39,0	1/1:1,7:8:17.74:121,18,0	1/1:0,9:9:26.68:188,27,0	0/0:25,0:25:75.24:0,75,1176	1/1:2,19:21:62.29:461,62,0	1/1:1,15:16:43.22:312,43,0	0/0:22,0:22:63.21:0,63,1007	0/0:22,0:22:66.22:0,66,1046	0/0:21,0:21:63.20:0,63,983	1/1:2,19:21:61.60:430,62,0	1/1:1,10:11:32.60:228,33,0	1/1:4,13:17:43.52:296,44,0	1/1:2,3:5:14.47:131,14,0	1/1:1,6:7:20.67:138,21,0	1/1:0,15:15:38.48:272,38,0	1/1:1,6:7:17.85:129,18,0	0/0:28,0:28:84.29:0,84,1343	0/0:19,0:19:57.19:0,57,905	0/0:23,0:23:69.22:0,69,1079	1/1:1,26:27:75.84:498,76,0	1/1:0,17:17:49.97:332,50,0	1/1:6,25:31:91.94:688,92,0	1/1:0,3:3:8.85:56,9,0
chr10	80739452	.	CATCAGGACAA	C	19215.34	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=17.495;DP=495;FS=5.036;HRun=0;HaplotypeScore=214.9303;InbreedingCoeff=0.9846;MQ=82.99;MQ0=0;MQRankSum=-18.210;QD=76.25;ReadPosRankSum=2.298;VQSLOD=4.6386;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,6944	1/1:0,7:7:21.07:581,21,0	0/0:21,0:21:59.50:0,60,2591	0/0:17,0:17:51.17:0,51,2135	1/1:1,26:27:57.20:1528,57,0	1/1:0,13:13:39.13:1091,39,0	1/1:1,7:8:18.06:497,18,0	1/1:0,9:9:27.09:752,27,0	0/0:24,0:24:72.25:0,72,3907	1/1:2,19:21:62.57:1614,63,0	1/1:0,15:15:42.14:1159,42,0	0/0:22,0:22:66.23:0,66,3401	0/0:21,0:21:63.22:0,63,3224	0/0:21,0:21:63.20:0,63,3289	1/1:1,19:20:60.21:1617,60,0	1/1:0,10:10:30.10:829,30,0	1/1:0,13:13:39.13:1072,39,0	1/1:2,3:5:15.05:312,15,0	1/1:0,6:6:18.06:492,18,0	1/1:0,15:15:42.14:1122,42,0	1/1:1,6:7:18.06:485,18,0	0/0:28,0:28:84.27:0,84,4428	0/0:18,0:18:54.17:0,54,2705	0/0:23,0:23:69.24:0,69,3639	1/1:0,26:26:78.06:2057,78,0	1/1:0,17:17:51.18:1397,51,0	1/1:5,25:30:90.20:2367,90,0	1/1:0,3:3:9.03:244,9,0
chr10	80739793	.	GA	G	9540.09	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=8.360;DP=541;FS=3.377;HRun=7;HaplotypeScore=68.5117;InbreedingCoeff=0.9881;MQ=73.66;MQ0=0;MQRankSum=-4.203;QD=28.23;ReadPosRankSum=1.671;VQSLOD=5.6973;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:63.18:0,63,778	1/1:0,8:8:24.05:245,24,0	0/0:13,0:13:33.10:0,33,392	0/0:8,0:8:17.94:0,18,182	1/1:0,34:34:99:1010,99,0	0/0:27,0:27:78.19:0,78,950	0/0:18,0:18:51.15:0,51,619	1/1:3,29:32:84.19:857,84,0	0/0:21,0:21:60.19:0,60,755	1/1:2,20:22:60.14:612,60,0	1/1:4,22:26:57.12:581,57,0	0/0:13,0:13:36.11:0,36,442	0/0:14,0:14:36.11:0,36,442	0/0:15,0:15:39.11:0,39,478	1/1:0,27:27:78.18:796,78,0	1/1:0,19:19:54.12:551,54,0	1/1:0,15:15:45.10:459,45,0	1/1:0,5:5:15.03:153,15,0	1/1:1,12:13:36.08:367,36,0	1/1:1,29:30:78.17:795,78,0	1/1:0,12:12:36.08:367,36,0	0/0:20,0:20:60.18:0,60,744	0/0:26,0:26:75.24:0,75,938	0/0:4,0:4:9.03:0,9,113	1/1:0,20:20:60.14:612,60,0	1/1:1,28:29:84.17:849,84,0	1/1:0,33:33:87.20:887,87,0	1/1:0,13:13:39.09:398,39,0
chr10	80740321	.	TG	T	7428.71	PASS	AB=0.556;AC=47;AF=0.979;AN=48;BaseQRankSum=0.293;DP=355;FS=0.000;HRun=1;HaplotypeScore=331.7505;InbreedingCoeff=-0.0338;MQ=28.80;MQ0=0;MQRankSum=0.364;QD=20.99;ReadPosRankSum=3.912;VQSLOD=3.7602;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,8:11:26.17:200,26,0	1/1:1,8:9:23.95:194,24,0	./.	./.	1/1:2,28:30:83.91:699,84,0	1/1:1,12:13:34.19:272,34,0	1/1:1,8:9:23.95:193,24,0	1/1:2,20:17:39.89:283,40,0	1/1:0,8:8:23.95:193,24,0	1/1:1,25:26:56.66:553,57,0	1/1:0,22:22:64.17:525,64,0	1/1:1,11:12:32.94:269,33,0	1/1:0,13:13:38.93:327,39,0	1/1:1,13:14:38.95:323,39,0	1/1:0,11:11:31.19:246,31,0	1/1:0,12:12:35.93:290,36,0	1/1:1,4:5:8.98:73,9,0	./.	1/1:1,8:9:4.19:119,4,0	1/1:2,26:28:74.86:606,75,0	./.	1/1:0,14:13:38.95:324,39,0	1/1:0,25:25:68.92:572,69,0	1/1:0,4:4:11.98:97,12,0	1/1:2,17:19:41.87:336,42,0	1/1:0,15:15:44.81:340,45,0	0/1:4,16:20:20.08:323,0,20	1/1:0,3:3:8.97:71,9,0
chr10	80740932	.	T	TGC	398.53	PASS	AB=0.807;AC=9;AF=0.237;AN=38;BaseQRankSum=0.896;DP=221;FS=27.990;HRun=0;HaplotypeScore=43.8990;InbreedingCoeff=-0.0500;MQ=27.04;MQ0=82;MQRankSum=-0.336;QD=5.18;ReadPosRankSum=-0.493;VQSLOD=0.7730;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,1:3:0.08:0,0,0	./.	./.	./.	./.	0/0:9,0:6:6:0,6,72	./.	0/0:41,0:9:14.79:0,15,183	0/0:9,3:8:10.25:0,10,108	0/1:6,4:7:99:161,0,146	0/0:4,1:2:6.02:0,6,98	0/0:9,1:8:9.03:0,9,147	./.	./.	./.	0/1:3,2:5:0.07:0,0,0	0/0:11,0:8:8.79:0,9,110	0/1:9,1:6:25.31:25,0,126	0/1:7,1:5:45.91:46,0,174	0/0:4,0:1:3.01:0,3,49	0/0:6,4:7:3.01:0,3,49	0/0:1,2:2:3.01:0,3,31	0/0:4,0:4:2.99:0,3,24	1/1:14,2:7:5.66:61,6,0	./.	0/1:9,2:7:45.90:46,0,181	0/0:4,1:2:3.01:0,3,49	0/1:6,3:7:81.70:168,0,82
chr10	80741053	.	A	ATG	765.16	PASS	AB=0.774;AC=9;AF=0.265;AN=34;BaseQRankSum=1.780;DP=284;FS=1.315;HRun=0;HaplotypeScore=24.0562;InbreedingCoeff=-0.0262;MQ=28.79;MQ0=79;MQRankSum=-2.781;QD=8.05;ReadPosRankSum=-0.413;VQSLOD=2.5966;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:14,0:1:3.01:0,3,46	0/0:11,0:2:0.34:0,0,33	./.	1/1:12,0:5:2.98:22,3,0	./.	0/1:30,7:22:57.92:261,0,58	0/0:24,0:13:12.04:0,12,181	0/1:4,4:5:24.66:216,0,25	./.	0/0:23,0:14:18.06:0,18,275	./.	./.	0/0:2,3:5:3.01:0,3,36	./.	0/0:8,0:5:0:0,0,1	0/1:4,2:3:27.31:52,0,27	0/1:6,1:3:39.80:51,0,40	0/0:7,1:5:3.01:0,3,37	./.	0/0:3,0:2:6.02:0,6,92	0/0:22,0:15:33.11:0,33,505	0/0:15,0:11:15.05:0,15,224	./.	0/1:9,5:9:6.12:266,0,6	./.	1/1:11,0:6:1.55:4,2,0
chr10	80741061	.	A	ATG	419.68	PASS	AB=1.000;AC=11;AF=0.306;AN=36;BaseQRankSum=4.706;DP=243;FS=4.801;HRun=0;HaplotypeScore=28.5900;InbreedingCoeff=0.3335;MQ=32.90;MQ0=38;MQRankSum=-3.521;QD=5.52;ReadPosRankSum=-2.163;VQSLOD=1.0991;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:14,0:1:3.01:0,3,36	0/0:13,0:3:0.97:0,1,34	./.	0/0:10,0:6:3:0,3,26	./.	0/1:26,0:22:1.43:96,0,1	0/0:16,0:13:12.04:0,12,183	1/1:7,0:6:2.39:93,2,0	./.	0/0:16,0:14:18.04:0,18,253	./.	./.	0/0:4,2:6:2.74:0,3,12	./.	0/0:4,3:6:0:0,0,0	0/1:5,0:3:7.77:8,0,16	0/1:7,0:4:12.72:13,0,40	0/0:5,3:5:2.84:0,3,14	./.	0/0:3,0:3:9.03:0,9,136	0/0:16,0:14:33.11:0,33,505	0/0:14,0:11:15.05:0,15,229	./.	1/1:10,3:10:26.50:258,27,0	1/1:8,0:8:5.94:41,6,0	1/1:9,1:6:3.01:32,3,0
chr10	80741064	.	CACATGT	C	655.56	PASS	AB=0.954;AC=16;AF=0.444;AN=36;BaseQRankSum=4.140;DP=234;FS=9.888;HRun=0;HaplotypeScore=33.1257;InbreedingCoeff=0.3057;MQ=33.60;MQ0=28;MQRankSum=-2.565;QD=7.05;ReadPosRankSum=-0.556;VQSLOD=-0.1108;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:15,0:1:2.80:0,3,13	0/0:13,0:3:4.25:0,4,34	./.	0/0:9,0:6:3:0,3,25	./.	0/1:24,2:22:35.97:256,0,36	0/0:15,0:13:11.89:0,12,208	0/1:7,0:6:18.85:69,0,19	./.	0/0:15,0:14:18.06:0,18,384	./.	./.	1/1:6,0:6:3.01:69,3,0	./.	0/1:7,1:7:0:0,0,0	1/1:4,0:3:2.79:13,3,0	0/1:7,0:4:13.21:13,0,15	1/1:6,2:5:3.01:69,3,0	./.	0/0:3,0:3:9.03:0,9,196	0/0:16,0:14:33.11:0,33,725	0/0:12,0:10:18.06:0,18,369	./.	1/1:11,2:10:21.55:220,22,0	1/1:8,0:8:0.89:2,1,0	1/1:1,5:6:3.01:67,3,0
chr10	80741152	.	CATATACACAT	C	594.25	PASS	AB=1.000;AC=11;AF=0.500;AN=22;BaseQRankSum=2.302;DP=133;FS=9.901;HRun=0;HaplotypeScore=24.0326;InbreedingCoeff=0.3563;MQ=54.51;MQ0=24;MQRankSum=-3.411;QD=15.64;ReadPosRankSum=-0.915;VQSLOD=-0.4950;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:13,0:5:0.62:0,1,2	./.	0/0:13,0:10:12.04:0,12,261	./.	0/1:17,0:6:8.84:187,0,9	./.	1/1:4,2:5:2.62:160,3,0	./.	./.	./.	./.	./.	./.	0/0:7,0:6:0:0,0,0	1/1:1,0:1:0.89:2,1,0	./.	./.	./.	0/0:3,0:3:3.01:0,3,65	0/0:8,0:8:21.07:0,21,458	./.	./.	1/1:2,2:3:6.02:188,6,0	1/1:2,1:3:3.01:94,3,0	1/1:4,3:6:2.96:56,3,0
chr10	80741184	.	CATATACACAT	C	70.84	PASS	AB=1.000;AC=7;AF=0.292;AN=24;BaseQRankSum=0.796;DP=106;FS=2.077;HRun=0;HaplotypeScore=20.7966;InbreedingCoeff=0.2595;MQ=30.91;MQ0=20;MQRankSum=-2.763;QD=3.22;ReadPosRankSum=0.140;VQSLOD=0.9819;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:2,2:4:3.01:0,3,38	./.	./.	./.	0/0:16,0:10:6:0,6,68	./.	1/1:10,0:1:2.90:16,3,0	./.	1/1:4,0:4:7.92:73,8,0	./.	./.	./.	./.	./.	./.	0/0:4,0:3:2.29:0,2,6	0/0:2,0:2:2.88:0,3,15	0/1:5,0:2:37.62:60,0,38	./.	./.	0/0:2,0:2:3.01:0,3,65	0/0:7,0:7:9.03:0,9,214	./.	./.	1/1:3,0:3:0.03:13,0,0	0/0:1,0:1:1.55:0,2,4	0/0:5,1:6:0:0,0,0
chr10	80741246	.	TAC	T	968.65	PASS	AB=0.641;AC=13;AF=0.406;AN=32;BaseQRankSum=-0.036;DP=121;FS=13.011;HRun=0;HaplotypeScore=32.1917;InbreedingCoeff=0.0204;MQ=30.77;MQ0=11;MQRankSum=-0.415;QD=12.92;ReadPosRankSum=2.430;VQSLOD=1.7962;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,1:3:3.01:46,3,0	./.	./.	./.	1/1:13,0:10:2.94:18,3,0	0/0:2,0:1:3.01:0,3,55	0/1:11,11:13:99:304,0,133	0/0:2,0:2:3.01:0,3,58	0/1:3,4:6:53.58:148,0,54	./.	0/0:1,0:1:3.01:0,3,58	./.	./.	1/1:1,0:1:3:28,3,0	./.	0/0:3,4:7:2.88:0,3,15	0/0:2,0:2:0:0,0,1	0/1:2,10:12:53.33:361,0,53	./.	./.	./.	0/0:2,0:2:3.01:0,3,58	./.	0/1:2,2:4:0:0,0,0	1/1:0,4:4:9.03:136,9,0	0/0:1,0:1:3.01:0,3,53	0/1:5,4:9:33.38:33,0,112
chr10	80741268	.	CAT	C	541.70	PASS	AB=0.765;AC=13;AF=0.464;AN=28;BaseQRankSum=-2.135;DP=101;FS=12.725;HRun=0;HaplotypeScore=39.8955;InbreedingCoeff=0.2770;MQ=30.93;MQ0=5;MQRankSum=-0.775;QD=11.06;ReadPosRankSum=-3.307;VQSLOD=0.5572;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,0:2:3.01:38,3,0	./.	./.	./.	./.	0/0:2,0:1:3.01:0,3,50	1/1:6,6:12:20.94:216,21,0	0/0:1,0:1:3.01:0,3,50	0/1:5,1:5:14.27:46,0,14	./.	0/0:1,0:1:3.01:0,3,50	./.	./.	1/1:2,0:2:0.89:2,1,0	0/0:2,2:4:2.49:0,2,9	0/0:4,4:8:2.90:0,3,16	./.	1/1:7,5:10:22.73:217,23,0	./.	./.	./.	./.	./.	0/1:3,1:4:0:0,0,0	1/1:1,3:4:9.03:106,9,0	0/0:1,0:1:2.80:0,3,13	0/1:3,4:7:15.50:23,0,16
chr10	80741280	.	TAC	T	173.77	PASS	AB=1.000;AC=13;AF=0.382;AN=34;BaseQRankSum=-1.574;DP=105;FS=15.862;HRun=0;HaplotypeScore=48.5207;InbreedingCoeff=0.1390;MQ=32.06;MQ0=5;MQRankSum=-1.833;QD=3.22;ReadPosRankSum=-2.872;VQSLOD=-0.4751;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,0:1:2.84:14,3,0	./.	./.	./.	0/0:10,0:10:3:0,3,25	0/0:2,0:1:3.01:0,3,58	1/1:8,0:8:17.41:97,17,0	0/0:1,0:1:3.01:0,3,57	0/1:4,0:4:15.47:15,0,31	0/0:4,0:4:2.94:0,3,18	0/0:1,0:1:3.01:0,3,58	./.	./.	0/0:3,0:3:2.92:0,3,17	1/1:4,0:4:0.47:1,0,0	0/1:9,0:9:9.56:10,0,10	./.	1/1:10,0:8:16.34:95,16,0	./.	./.	./.	0/0:2,0:2:0:0,0,0	./.	0/1:4,0:4:0:0,0,0	0/1:5,0:5:5.28:37,0,5	0/0:1,0:1:2.98:0,3,21	0/1:9,0:9:12.62:13,0,31
chr10	80741290	.	T	TAC	30.40	PASS	AB=1.000;AC=12;AF=0.333;AN=36;BaseQRankSum=1.071;DP=136;FS=6.066;HRun=0;HaplotypeScore=48.6532;InbreedingCoeff=0.3795;MQ=38.28;MQ0=5;MQRankSum=-0.145;QD=0.68;ReadPosRankSum=2.711;VQSLOD=0.5975;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,4:7:0:0,0,0	./.	./.	0/0:11,0:2:5.74:0,6,36	./.	0/0:12,0:11:3.01:0,3,42	0/0:2,0:1:3.01:0,3,46	0/0:12,0:12:12.57:0,13,105	0/0:1,0:1:3.01:0,3,46	1/1:4,0:4:8.04:40,8,0	1/1:4,0:4:2.04:6,2,0	0/0:2,0:2:6:0,6,70	./.	./.	0/0:4,0:4:2.92:0,3,17	1/1:5,0:5:2.94:18,3,0	1/1:13,0:13:5.83:34,6,0	0/0:2,0:2:1.55:0,2,4	0/0:14,0:11:13.40:0,13,94	./.	./.	./.	./.	./.	0/1:5,0:5:0:0,0,0	0/0:4,0:4:7.14:0,7,39	1/1:3,0:3:2.90:16,3,0	0/1:11,0:11:16.56:28,0,17
chr10	80741292	.	T	TAC	705.43	PASS	AB=0.873;AC=20;AF=0.526;AN=38;BaseQRankSum=-1.280;DP=147;FS=4.642;HRun=0;HaplotypeScore=48.0029;InbreedingCoeff=0.2490;MQ=38.94;MQ0=4;MQRankSum=-0.252;QD=8.20;ReadPosRankSum=0.449;VQSLOD=2.5940;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:0:0,0,0	./.	./.	0/0:10,0:2:2.55:0,3,9	0/1:3,0:2:0:0,0,0	0/0:13,0:12:3.01:0,3,42	0/0:2,0:1:3.01:0,3,46	0/1:14,1:15:54.20:111,0,54	0/0:1,0:1:3.01:0,3,46	1/1:3,2:5:11.98:153,12,0	1/1:2,2:4:3.01:55,3,0	0/0:3,0:3:6:0,6,70	./.	./.	./.	1/1:2,3:5:3.01:53,3,0	1/1:4,11:15:6.02:105,6,0	1/1:2,0:2:2.97:20,3,0	0/1:14,0:11:43.16:92,0,43	./.	./.	./.	0/0:2,0:2:3:0,3,25	./.	0/1:1,4:5:0:0,0,0	1/1:4,0:4:1.73:4,2,0	1/1:0,3:3:3.01:54,3,0	1/1:8,3:11:3.76:171,4,0
chr10	80741297	.	GTATA	G	1024.53	PASS	AB=0.988;AC=15;AF=0.395;AN=38;BaseQRankSum=-1.871;DP=163;FS=1.131;HRun=0;HaplotypeScore=53.0609;InbreedingCoeff=0.2819;MQ=50.13;MQ0=2;MQRankSum=-1.176;QD=11.14;ReadPosRankSum=-1.401;VQSLOD=2.4104;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:12.02:161,12,0	./.	0/0:7,0:3:5.65:0,6,31	0/0:10,0:2:6:0,6,61	0/0:4,0:3:0:0,0,1	0/0:10,0:9:2.86:0,3,24	./.	1/1:17,0:17:32.95:374,33,0	./.	0/1:4,0:4:11.71:72,0,12	0/0:5,0:5:0.02:0,0,0	0/0:3,0:3:9.03:0,9,175	./.	1/1:7,0:7:6.01:72,6,0	./.	0/0:5,0:5:2.04:0,2,6	0/1:15,1:16:2.98:29,0,3	1/1:2,0:2:3.01:41,3,0	1/1:12,1:11:17.94:209,18,0	./.	./.	./.	0/0:5,0:5:12.03:0,12,175	./.	0/1:5,0:5:0:0,0,0	0/1:5,0:5:43.50:43,0,48	0/0:3,0:3:2.74:0,3,12	0/1:12,0:12:23.14:147,0,23
chr10	80741581	.	GTCCATTT	G	13006.39	PASS	AB=0.571;AC=34;AF=0.607;AN=56;BaseQRankSum=15.550;DP=490;FS=18.135;HRun=0;HaplotypeScore=184.2302;InbreedingCoeff=0.8206;MQ=52.74;MQ0=10;MQRankSum=-14.032;QD=52.45;ReadPosRankSum=-0.042;VQSLOD=3.6191;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:90.31:0,90,3505	1/1:3,5:8:18.06:429,18,0	0/0:36,0:17:48.16:0,48,1833	0/0:38,0:13:35.91:0,36,1108	1/1:6,13:17:30.10:668,30,0	1/1:8,15:22:45.14:1089,45,0	1/1:4,7:11:24.08:580,24,0	1/1:2,11:10:24.08:616,24,0	0/0:18,0:18:33.11:0,33,1244	1/1:3,15:17:42.10:1021,42,0	1/1:1,6:7:15.05:375,15,0	0/0:20,0:20:48.16:0,48,1882	0/0:17,0:17:45.15:0,45,1752	0/0:20,0:20:51.18:0,51,1961	1/1:4,12:15:36.11:860,36,0	0/1:5,11:16:80.89:818,0,81	0/1:2,9:9:12.19:507,0,12	1/1:2,2:3:3.01:77,3,0	1/1:2,6:7:18.06:456,18,0	1/1:1,19:20:57.20:1439,57,0	1/1:6,10:15:24.07:555,24,0	0/0:15,0:14:42.13:0,42,1585	0/0:13,0:13:36.12:0,36,1439	0/0:24,0:24:57.18:0,57,2074	1/1:4,18:22:51.18:1290,51,0	1/1:3,13:16:39.13:999,39,0	1/1:4,12:16:39.13:974,39,0	1/1:1,3:4:12.02:253,12,0
chr10	80741593	.	GATAGCT	G	12845.82	PASS	AB=0.552;AC=33;AF=0.589;AN=56;BaseQRankSum=15.911;DP=442;FS=16.199;HRun=0;HaplotypeScore=161.9528;InbreedingCoeff=0.7670;MQ=56.13;MQ0=4;MQRankSum=-14.119;QD=65.21;ReadPosRankSum=1.732;VQSLOD=4.2041;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:87.30:0,87,3225	1/1:1,5:6:18.06:438,18,0	0/0:44,0:21:60.17:0,60,1825	0/0:41,0:20:49.61:0,50,1665	1/1:1,14:14:33.11:758,33,0	1/1:0,15:14:42.14:1049,42,0	1/1:0,7:7:21.07:524,21,0	1/1:0,12:10:27.09:652,27,0	0/0:15,0:15:33.11:0,33,1196	1/1:0,15:14:39.13:987,39,0	0/1:1,7:8:67.86:351,0,68	0/0:18,0:18:51.18:0,51,1852	0/0:17,0:17:51.18:0,51,1856	0/0:18,0:18:48.16:0,48,1803	1/1:0,12:11:33.11:824,33,0	0/1:1,11:12:76.83:784,0,77	1/1:1,9:8:24.08:599,24,0	0/1:1,2:2:69.97:70,0,103	1/1:0,5:6:18.06:447,18,0	1/1:0,19:19:57.20:1420,57,0	1/1:0,10:9:21.07:524,21,0	0/0:17,0:17:45.15:0,45,1667	0/0:15,0:15:42.14:0,42,1459	0/0:23,0:23:60.18:0,60,2258	1/1:0,18:18:51.18:1264,51,0	1/1:0,13:13:39.13:986,39,0	1/1:1,12:13:39.13:942,39,0	1/1:0,3:3:9.03:226,9,0
chr10	80741599	.	T	TG	5480.05	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=15.775;DP=495;FS=6.665;HRun=1;HaplotypeScore=177.0561;InbreedingCoeff=0.7710;MQ=55.72;MQ0=3;MQRankSum=-14.131;QD=21.66;ReadPosRankSum=-0.535;VQSLOD=4.2392;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:87.27:0,87,1114	1/1:7,1:8:23.93:224,24,0	0/0:40,0:18:53.90:0,54,662	0/0:40,0:20:58.64:0,59,679	1/1:19,2:20:41.46:410,41,0	1/1:18,1:18:53.88:489,54,0	1/1:9,0:9:23.93:206,24,0	1/1:19,0:17:38.97:384,39,0	0/0:16,0:16:36.12:0,36,466	1/1:22,2:23:65.88:613,66,0	0/1:10,0:10:16.90:134,0,17	0/0:16,0:16:45.15:0,45,584	0/0:19,0:19:57.19:0,57,739	0/0:19,0:19:45.15:0,45,584	1/1:15,0:14:38.90:325,39,0	0/1:14,0:14:35.99:235,0,36	1/1:12,1:11:32.95:304,33,0	0/1:5,0:4:26.95:64,0,27	1/1:10,0:10:23.95:212,24,0	1/1:20,0:20:59.82:486,60,0	1/1:13,0:12:23.91:185,24,0	0/0:17,0:17:42.14:0,42,545	0/0:14,0:14:33.11:0,33,428	0/0:24,0:24:63.16:0,63,799	1/1:18,0:18:50.72:384,51,0	1/1:15,0:15:44.93:397,45,0	1/1:16,0:16:36.27:355,36,0	1/1:4,0:4:8.97:71,9,0
chr10	80742081	.	A	AT	2093.91	PASS	AB=0.962;AC=7;AF=0.125;AN=56;BaseQRankSum=5.695;DP=681;FS=0.000;HRun=5;HaplotypeScore=67.3414;InbreedingCoeff=0.8498;MQ=62.74;MQ0=6;MQRankSum=0.895;QD=21.37;ReadPosRankSum=0.987;VQSLOD=2.8052;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,24:31:72.22:930,72,0	0/0:9,0:9:24.06:0,24,258	0/1:24,1:16:9.62:10,0,254	0/0:20,0:12:36.04:0,36,369	0/0:33,0:33:93.20:0,93,982	0/0:25,0:25:66.13:0,66,692	0/0:12,0:12:36.09:0,36,387	0/0:37,0:36:87.18:0,87,913	0/0:28,0:28:78.16:0,78,819	0/0:29,0:29:69.15:0,69,731	0/0:31,0:31:90.20:0,90,956	0/0:18,0:18:54.14:0,54,580	1/1:2,16:18:45.15:591,45,0	1/1:0,23:23:54.18:711,54,0	0/0:21,0:21:57.14:0,57,613	0/0:23,0:23:66.14:0,66,693	0/0:19,0:20:51.06:0,51,533	0/0:32,0:32:66.49:0,66,875	0/0:21,0:19:51.09:0,51,535	0/0:32,0:32:90.21:0,90,959	0/0:20,0:20:60.15:0,60,645	0/0:22,0:22:63.14:0,63,669	0/0:22,0:22:63.16:0,63,677	0/0:27,0:27:78.17:0,78,829	0/0:29,0:29:75.15:0,75,789	0/0:31,0:30:78.05:0,78,823	0/0:33,0:31:93.21:0,93,990	0/0:8,0:8:24.06:0,24,258
chr10	80743874	.	GTT	G	7439.89	PASS	AB=0.939;AC=35;AF=0.625;AN=56;BaseQRankSum=5.415;DP=504;FS=4.555;HRun=11;HaplotypeScore=124.7521;InbreedingCoeff=0.8061;MQ=71.05;MQ0=3;MQRankSum=-1.185;QD=22.28;ReadPosRankSum=2.070;VQSLOD=4.0214;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:3.13:3,0,105	1/1:2,9:11:24.04:254,24,0	0/0:22,0:19:40.72:0,41,343	0/1:16,0:10:1.09:1,0,96	1/1:1,27:28:66.61:693,67,0	0/0:10,0:26:24.17:0,24,141	0/1:7,1:9:14.02:14,0,69	1/1:9,18:27:57.06:594,57,0	0/0:17,0:19:44.11:0,44,598	1/1:3,27:30:78.13:814,78,0	1/1:4,20:24:60.11:631,60,0	0/0:11,0:11:30.10:0,30,461	0/0:19,0:19:41.98:0,42,361	0/0:15,0:15:18.27:0,18,245	1/1:2,18:20:54.13:575,54,0	1/1:1,13:14:36.08:381,36,0	1/1:0,9:9:24.06:255,24,0	1/1:2,10:12:12.81:248,13,0	1/1:5,14:19:4.01:336,4,0	1/1:3,18:21:51.11:536,51,0	1/1:2,9:11:21.04:222,21,0	0/0:17,0:17:44.97:0,45,639	0/0:21,0:22:56.66:0,57,798	0/0:15,0:17:45.13:0,45,653	1/1:2,12:14:36.08:383,36,0	1/1:4,21:25:63.10:650,63,0	1/1:1,24:25:66.15:691,66,0	1/1:0,6:6:15.04:160,15,0
chr10	80743877	.	T	TTTTGG	4550.53	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=-8.077;DP=507;FS=3.792;HRun=0;HaplotypeScore=163.4145;InbreedingCoeff=-0.0148;MQ=70.56;MQ0=3;MQRankSum=-6.709;QD=15.12;ReadPosRankSum=-7.122;VQSLOD=2.0369;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:4,11:15:5.24:605,5,0	0/1:10,0:10:23.65:24,0,141	0/0:24,0:19:44.67:0,45,540	0/0:16,0:10:14.44:0,14,202	0/1:28,0:28:99:162,0,256	0/0:22,0:22:57.26:0,57,832	0/0:8,0:8:21.07:0,21,319	0/1:27,0:27:99:310,0,303	0/0:18,0:18:48.16:0,48,926	0/1:32,0:32:99:213,0,356	0/1:24,0:24:91.17:91,0,284	0/0:12,0:12:33.11:0,33,667	1/1:2,18:21:48.16:1289,48,0	1/1:1,13:16:36.08:969,36,0	0/0:21,0:21:51.61:0,52,283	0/1:14,0:14:64.02:64,0,148	0/0:9,0:9:12.64:0,13,93	0/1:15,0:15:99:115,0,141	0/1:18,0:18:99:219,0,157	0/1:21,0:21:99:136,0,233	0/1:11,0:11:37.30:37,0,94	0/0:17,0:17:48.16:0,48,924	0/0:21,0:21:60.19:0,60,1156	0/0:18,0:18:48.15:0,48,923	0/0:14,0:14:40.44:0,40,260	0/1:23,0:23:99:218,0,222	0/1:26,0:26:99:100,0,261	0/0:6,0:6:14.27:0,14,73
chr10	80743940	.	AT	A	884.67	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.135;DP=506;FS=7.576;HRun=4;HaplotypeScore=73.9736;InbreedingCoeff=0.9923;MQ=73.64;MQ0=0;MQRankSum=-1.282;QD=29.49;ReadPosRankSum=1.107;VQSLOD=3.5309;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:42.14:0,42,573	0/0:7,0:7:21.07:0,21,290	0/0:11,0:11:33.11:0,33,448	0/0:8,0:8:24.08:0,24,335	0/0:24,0:24:69.19:0,69,942	1/1:0,21:21:63.19:753,63,0	1/1:0,9:9:21.06:252,21,0	0/0:30,0:30:87.29:0,87,1218	0/0:20,0:20:60.19:0,60,823	0/0:25,0:25:72.24:0,72,1002	0/0:15,0:15:39.12:0,39,521	0/0:16,0:16:48.16:0,48,661	0/0:13,0:13:30.10:0,30,405	0/0:12,0:12:33.11:0,33,457	0/0:20,0:20:57.18:0,57,782	0/0:21,0:21:54.17:0,54,738	0/0:12,0:12:36.12:0,36,504	0/0:17,0:17:42.12:0,42,570	0/0:25,0:25:66.19:0,66,890	0/0:21,0:21:60.20:0,60,828	0/0:18,0:18:51.17:0,51,710	0/0:23,0:23:66.21:0,66,906	0/0:30,0:30:87.29:0,87,1212	0/0:11,0:11:30.06:0,30,397	0/0:10,0:10:27.09:0,27,378	0/0:27,0:27:75.23:0,75,1030	0/0:33,0:33:87.27:0,87,1186	0/0:8,0:8:24.08:0,24,336
chr10	80744192	.	ATCTCTGGTG	A	2452.46	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=1.899;DP=447;FS=6.678;HRun=0;HaplotypeScore=144.5955;InbreedingCoeff=0.5401;MQ=101.25;MQ0=0;MQRankSum=-5.966;QD=35.54;ReadPosRankSum=-3.261;VQSLOD=2.4848;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:18.06:585,18,0	0/0:5,0:5:15.05:0,15,599	0/0:26,0:26:78.24:0,78,2942	0/0:32,0:32:89.35:0,89,3878	0/0:17,0:17:0.17:0,0,1565	0/0:15,0:15:32.76:0,33,1536	0/0:14,0:14:42.13:0,42,1905	0/0:19,0:19:0.18:0,0,1593	0/0:20,0:20:60.21:0,60,2985	0/0:14,0:14:42.14:0,42,1617	0/0:12,0:12:10.11:0,10,1173	0/0:13,0:13:39.10:0,39,1687	1/1:0,8:8:24.08:777,24,0	1/1:0,13:13:36.12:1168,36,0	0/0:14,0:14:42.14:0,42,1693	0/0:25,0:25:41.21:0,41,2379	0/0:11,0:11:30.09:0,30,966	0/0:7,0:7:18.06:0,18,663	0/1:10,0:10:21.90:22,0,697	0/0:19,0:19:1.17:0,1,1650	0/1:27,0:27:49.29:49,0,2253	0/0:15,0:15:42.06:0,42,1958	0/0:14,0:14:42.13:0,42,1841	0/0:25,0:25:69.22:0,69,3333	0/0:13,0:13:11.10:0,11,1075	0/0:20,0:20:33.21:0,33,2165	0/0:23,0:23:29.21:0,29,2342	0/0:5,0:5:15.05:0,15,545
chr10	80744238	.	T	TACACACAC	4721.77	PASS	AB=0.864;AC=37;AF=0.740;AN=50;BaseQRankSum=-1.279;DP=510;FS=6.358;HRun=0;HaplotypeScore=171.0915;InbreedingCoeff=0.5656;MQ=53.67;MQ0=18;MQRankSum=-4.552;QD=13.04;ReadPosRankSum=-3.518;VQSLOD=2.2832;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:19:6.17:62,6,0	1/1:3,2:8:2.86:122,3,0	./.	0/1:39,0:21:0:0,0,0	0/0:10,3:18:0.13:0,0,1	1/1:17,0:16:3.48:104,3,0	1/1:18,0:17:6.02:91,6,0	1/1:20,0:20:35.32:749,35,0	0/0:17,0:17:18.06:0,18,450	1/1:12,6:22:33.09:747,33,0	./.	0/0:11,0:11:15.05:0,15,340	./.	1/1:16,0:15:2.77:43,3,0	1/1:12,3:19:9.03:309,9,0	1/1:17,4:24:5.75:245,6,0	1/1:15,1:16:8.44:308,8,0	1/1:8,0:9:5.09:238,5,0	1/1:5,0:4:3.90:58,4,0	1/1:19,1:20:12.02:275,12,0	0/1:17,1:17:0.02:0,0,0	0/0:17,0:20:36.12:0,36,851	0/1:8,0:20:1.32:1,0,126	0/0:22,0:23:30.10:0,30,700	1/1:8,2:11:2.74:12,3,0	1/1:18,2:22:25.87:570,26,0	1/1:20,3:26:14.97:539,15,0	1/1:2,3:5:6.02:245,6,0
chr10	80744923	.	A	ATT	1981.61	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.373;DP=596;FS=0.000;HRun=9;HaplotypeScore=79.7674;InbreedingCoeff=0.9880;MQ=68.73;MQ0=0;MQRankSum=-0.520;QD=30.49;ReadPosRankSum=-0.829;VQSLOD=3.5902;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,24:33:63.21:970,63,0	0/0:10,0:10:30.08:0,30,319	0/0:19,0:18:14.21:0,14,236	0/0:16,0:16:31.88:0,32,319	0/0:39,0:39:93.13:0,93,980	0/0:3,0:23:52.13:0,52,227	0/0:1,0:20:43.90:0,44,192	0/0:21,0:21:51.08:0,51,528	0/0:26,0:26:66.14:0,66,702	0/0:32,0:33:86.94:0,87,901	0/0:30,0:30:78.15:0,78,829	0/0:15,0:15:16.91:0,17,382	1/1:1,14:15:42.14:647,42,0	1/1:3,14:17:33.11:508,33,0	0/0:17,0:17:45.08:0,45,471	0/0:13,0:13:33.07:0,33,351	0/0:19,0:19:48.11:0,48,511	0/0:17,0:17:39.04:0,39,405	0/0:15,0:15:33.07:0,33,345	0/0:31,0:31:78.17:0,78,830	0/0:14,0:14:23.99:0,24,255	0/0:24,0:24:60.10:0,60,628	0/0:26,0:26:54.04:0,54,574	0/0:12,0:14:32.55:0,33,311	0/0:22,0:22:60.12:0,60,631	0/0:27,0:27:69.05:0,69,703	0/0:27,0:27:69.10:0,69,717	0/0:13,0:13:36.09:0,36,383
chr10	80747181	.	T	TA	14034.56	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=8.902;DP=503;FS=13.200;HRun=5;HaplotypeScore=117.9295;InbreedingCoeff=0.9756;MQ=70.09;MQ0=0;MQRankSum=-3.785;QD=33.50;ReadPosRankSum=1.408;VQSLOD=3.1021;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:72.19:916,72,0	1/1:1,8:9:24.08:311,24,0	0/0:10,0:9:20.99:0,21,210	0/0:12,0:12:17.11:0,17,242	1/1:5,30:35:84.27:1091,84,0	1/1:2,20:22:57.19:750,57,0	1/1:0,16:16:45.15:588,45,0	1/1:5,27:32:87.21:1068,87,0	0/0:17,0:17:39.10:0,39,419	1/1:2,23:25:66.17:811,66,0	1/1:4,25:29:72.19:918,72,0	0/0:4,0:4:6.01:0,6,64	1/1:2,19:21:48.16:625,48,0	1/1:0,10:10:30.10:390,30,0	1/1:0,9:9:24.08:312,24,0	1/1:1,7:8:21.07:273,21,0	1/1:0,12:12:33.11:430,33,0	1/1:1,23:24:66.21:859,66,0	1/1:2,16:18:48.13:607,48,0	1/1:3,28:31:84.20:1056,84,0	1/1:1,10:11:30.10:390,30,0	0/0:16,0:16:48.12:0,48,510	0/0:17,0:17:48.10:0,48,500	0/0:8,0:8:21.05:0,21,226	1/1:1,16:17:45.15:586,45,0	1/1:3,21:24:63.20:804,63,0	1/1:3,21:23:57.10:703,57,0	1/1:1,14:15:42.14:546,42,0
chr10	80747336	.	T	TAC	19546.23	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-15.772;DP=584;FS=6.292;HRun=0;HaplotypeScore=62.7962;InbreedingCoeff=0.9970;MQ=92.03;MQ0=1;MQRankSum=-4.751;QD=50.64;ReadPosRankSum=2.111;VQSLOD=5.4464;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:54.19:1042,54,0	1/1:0,6:7:18.06:324,18,0	0/0:30,0:30:77.97:0,78,1033	0/0:18,0:18:42.14:0,42,616	1/1:2,27:29:66.23:1274,66,0	0/0:25,0:25:72.21:0,72,1054	0/0:20,0:20:60.20:0,60,914	1/1:2,34:36:99:1889,99,0	0/0:18,0:18:54.15:0,54,783	1/1:0,21:20:60.21:1129,60,0	1/1:0,30:30:84.29:1622,84,0	0/0:16,0:16:45.15:0,45,689	1/1:0,21:21:54.19:1042,54,0	1/1:0,15:15:36.12:695,36,0	1/1:0,9:10:27.09:521,27,0	1/1:0,8:8:18.06:348,18,0	1/1:0,22:22:60.21:1158,60,0	1/1:2,10:12:24.08:463,24,0	1/1:0,13:13:39.13:739,39,0	1/1:2,33:36:84.29:1600,84,0	1/1:0,22:22:63.22:1217,63,0	0/0:16,0:16:48.16:0,48,732	0/0:30,0:30:81.28:0,81,1240	0/0:25,0:25:75.25:0,75,1147	1/1:0,14:14:39.13:753,39,0	1/1:0,23:23:69.22:1297,69,0	1/1:2,26:28:75.26:1448,75,0	1/1:0,19:19:51.17:984,51,0
chr10	80747995	.	CTGTCTGTG	C	7583.28	PASS	AB=0.750;AC=33;AF=0.611;AN=54;BaseQRankSum=11.039;DP=449;FS=18.863;HRun=0;HaplotypeScore=151.8429;InbreedingCoeff=0.8551;MQ=79.75;MQ0=0;MQRankSum=-11.653;QD=31.73;ReadPosRankSum=-0.208;VQSLOD=3.4820;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,6:16:17.47:354,17,0	1/1:1,8:9:15.05:331,15,0	0/0:31,0:30:57.19:0,57,1974	0/0:40,0:35:59.58:0,60,1862	1/1:3,8:11:20.94:305,21,0	0/0:23,0:23:48.12:0,48,1839	0/0:18,0:18:48.16:0,48,1837	1/1:7,19:24:50.96:852,51,0	0/0:14,0:14:24.08:0,24,953	1/1:8,13:21:42.02:838,42,0	1/1:10,4:14:12:174,12,0	0/0:12,0:12:24.07:0,24,885	1/1:2,8:10:15.05:373,15,0	1/1:8,12:20:26.76:594,27,0	1/1:1,11:12:21.07:449,21,0	0/1:6,3:8:99:166,0,112	1/1:6,7:13:12.04:315,12,0	./.	1/1:1,6:7:18.01:270,18,0	1/1:1,18:20:36.08:730,36,0	0/0:4,3:7:0:0,0,0	0/0:21,0:21:60.21:0,60,2464	0/0:14,0:14:30.09:0,30,1081	0/0:29,0:29:66.63:0,67,2473	1/1:5,12:17:27.05:577,27,0	1/1:5,13:18:36.10:851,36,0	1/1:2,6:8:12:251,12,0	1/1:5,3:8:6.02:153,6,0
chr10	80748025	.	A	ATCTC	2599.61	PASS	AB=0.919;AC=42;AF=0.808;AN=52;BaseQRankSum=2.972;DP=491;FS=7.128;HRun=0;HaplotypeScore=189.2210;InbreedingCoeff=0.3025;MQ=53.30;MQ0=14;MQRankSum=-4.929;QD=6.95;ReadPosRankSum=-1.029;VQSLOD=2.0053;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:3.48:69,3,0	1/1:12,0:12:6.93:60,7,0	0/0:34,0:18:1.55:0,2,4	./.	1/1:13,0:13:0.47:1,0,0	1/1:19,0:21:21.03:251,21,0	1/1:22,0:22:14.70:138,15,0	1/1:28,0:25:14.87:105,15,0	0/1:11,0:14:14.88:15,0,198	1/1:17,0:16:22.18:246,22,0	1/1:14,0:14:1.03:3,1,0	0/0:11,0:12:11.87:0,12,122	1/1:12,0:12:2.98:22,3,0	1/1:21,0:20:12.98:174,13,0	1/1:13,0:13:2.80:13,3,0	1/1:8,0:8:3.90:51,4,0	1/1:9,0:9:8.99:118,9,0	./.	1/1:10,0:10:11.95:119,12,0	1/1:25,0:25:6.45:70,6,0	0/1:7,0:6:0:0,0,0	0/0:24,0:26:23.79:0,24,308	0/1:11,3:14:22.15:326,0,22	0/1:28,4:34:35.88:374,0,36	1/1:20,0:20:6.49:102,6,0	1/1:20,0:20:33.34:355,33,0	1/1:11,0:11:3.01:50,3,0	1/1:11,0:10:5.97:75,6,0
chr10	80748053	.	C	CTCTCTCTCTT	4583.27	PASS	AB=0.938;AC=34;AF=0.630;AN=54;BaseQRankSum=4.124;DP=459;FS=7.559;HRun=0;HaplotypeScore=176.5825;InbreedingCoeff=0.3806;MQ=43.48;MQ0=20;MQRankSum=-6.879;QD=13.72;ReadPosRankSum=-1.525;VQSLOD=2.7775;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:20:10.59:367,0,11	1/1:9,1:10:20.86:255,21,0	0/1:23,0:6:0.84:1,0,19	0/0:29,0:6:10.77:0,11,58	0/1:14,0:14:4.41:4,0,10	0/1:20,0:20:78.59:182,0,79	0/1:20,0:20:24.32:24,0,146	1/1:23,0:22:37.75:455,38,0	0/0:16,0:16:43.24:0,43,699	1/1:17,1:17:16.86:494,17,0	1/1:12,1:13:11:64,11,0	0/0:12,0:12:24.02:0,24,384	0/1:12,0:12:29.20:102,0,29	1/1:18,0:18:25.42:390,25,0	1/1:12,1:12:3.57:25,4,0	1/1:6,0:7:17.57:191,18,0	1/1:5,2:6:12.47:353,12,0	./.	1/1:17,0:15:18.89:284,19,0	1/1:22,2:23:8.49:251,8,0	1/1:7,0:5:0.47:1,0,0	0/0:20,0:19:47.81:0,48,846	0/0:17,0:16:18.66:0,19,229	0/0:30,0:29:25.70:0,26,271	1/1:21,1:24:37.28:369,37,0	1/1:21,0:22:14:614,14,0	0/1:2,8:11:10.57:149,0,11	0/1:9,0:8:10.50:11,0,37
chr10	80748081	.	G	GACACAC	2126.82	PASS	AB=0.778;AC=32;AF=0.640;AN=50;BaseQRankSum=2.751;DP=442;FS=7.270;HRun=0;HaplotypeScore=148.6825;InbreedingCoeff=0.4495;MQ=45.32;MQ0=12;MQRankSum=-5.222;QD=7.68;ReadPosRankSum=-5.250;VQSLOD=-0.2290;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:26:32.94:33,0,122	1/1:8,0:8:3.01:68,3,0	1/1:30,0:7:1.25:3,1,0	0/0:29,0:6:3.01:0,3,55	0/1:9,1:12:0:0,0,1	1/1:14,6:23:2.89:26,3,0	1/1:7,5:18:0.51:33,1,0	1/1:16,0:15:6.49:161,6,0	0/0:13,0:15:27.09:0,27,524	1/1:15,1:14:9.92:256,10,0	./.	0/0:10,0:9:12.04:0,12,224	0/0:6,0:11:5.67:0,6,66	0/1:10,0:12:12.69:13,0,63	0/1:8,1:8:0:1,0,0	1/1:10,0:12:6.02:156,6,0	1/1:3,0:3:3.01:78,3,0	./.	1/1:10,0:10:3.01:82,3,0	1/1:14,0:13:3.01:65,3,0	./.	0/0:20,0:24:36.10:0,36,631	0/0:11,0:16:18.06:0,18,308	0/0:23,0:26:30.10:0,30,572	1/1:15,1:20:8.55:203,9,0	1/1:19,0:22:36.96:827,37,0	1/1:13,0:13:6.02:122,6,0	1/1:6,0:7:6.02:157,6,0
chr10	80749160	.	A	AGT	1047.39	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-7.052;DP=319;FS=3.059;HRun=0;HaplotypeScore=36.3259;InbreedingCoeff=0.7148;MQ=71.71;MQ0=1;MQRankSum=-1.049;QD=26.18;ReadPosRankSum=-0.309;VQSLOD=3.9221;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:21:42.14:685,42,0	0/0:6,0:6:18.06:0,18,222	0/0:12,0:11:24.06:0,24,283	0/0:14,0:12:12.03:0,12,140	0/0:18,0:18:51.16:0,51,628	0/0:25,0:25:66.19:0,66,799	0/1:6,0:6:13.53:14,0,98	0/0:30,0:30:54.17:0,54,665	0/0:6,0:6:12.04:0,12,148	0/0:13,0:13:36.10:0,36,426	0/0:10,0:11:23.91:0,24,273	0/0:7,0:7:18.06:0,18,222	1/1:0,4:4:6.02:98,6,0	1/1:0,8:8:24.08:391,24,0	0/0:6,0:6:6.01:0,6,62	0/0:9,0:9:21.07:0,21,258	0/0:10,0:10:27.08:0,27,332	0/0:10,0:10:24.08:0,24,295	0/0:10,0:10:21.06:0,21,247	0/0:16,0:16:45.14:0,45,554	0/0:3,0:3:6.02:0,6,74	0/0:7,0:7:15.05:0,15,184	0/0:11,0:11:27.07:0,27,319	0/0:4,0:4:12.04:0,12,148	0/0:10,0:10:24.05:0,24,281	0/0:17,0:17:45.14:0,45,554	0/0:14,0:14:33.10:0,33,406	0/0:9,0:9:27.01:0,27,299
chr10	80750456	.	AT	A	568.90	PASS	AC=4;AF=0.250;AN=16;BaseQRankSum=6.718;DP=97;FS=13.302;HRun=8;HaplotypeScore=38.8221;MQ=55.88;MQ0=2;MQRankSum=-0.156;QD=23.70;ReadPosRankSum=-0.847;VQSLOD=2.4175;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:2,0:1:2.99:0,3,24	./.	1/1:1,13:14:39.06:377,39,0	1/1:0,10:10:30.05:290,30,0	./.	0/0:16,0:16:45.13:0,45,534	./.	./.	0/0:12,0:11:24.07:0,24,290	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/0:12,0:12:33.06:0,33,381	0/0:18,0:18:39.10:0,39,471	0/0:8,0:8:24.07:0,24,290	./.	./.	./.	./.
chr10	80752751	.	CTT	C	1005.25	PASS	AC=32;AF=0.727;AN=44;BaseQRankSum=-0.947;DP=93;FS=31.512;HRun=11;HaplotypeScore=22.9398;InbreedingCoeff=0.5288;MQ=95.13;MQ0=9;MQRankSum=-4.299;QD=23.93;ReadPosRankSum=4.054;VQSLOD=0.6733;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:3.01:32,3,0	1/1:0,1:1:3.01:32,3,0	0/0:20,0:12:24.99:0,25,272	0/0:16,0:10:5.68:0,6,199	1/1:0,2:2:6.02:64,6,0	./.	./.	1/1:2,2:2:6.02:64,6,0	0/0:4,0:4:12.04:0,12,184	1/1:0,3:3:9.02:96,9,0	1/1:0,1:1:3.01:32,3,0	0/0:1,0:1:3.01:0,3,46	1/1:0,2:2:6.02:64,6,0	./.	1/1:0,1:1:3.01:32,3,0	1/1:0,1:1:3.01:32,3,0	1/1:0,3:3:9.02:96,9,0	1/1:0,3:3:9.02:96,9,0	1/1:2,4:4:12.03:128,12,0	1/1:0,4:4:12.03:128,12,0	1/1:2,1:1:3.01:32,3,0	0/0:4,0:2:3.01:0,3,46	0/0:6,0:3:6.02:0,6,92	./.	./.	1/1:0,1:1:3.01:32,3,0	1/1:0,6:6:18.05:191,18,0	./.
chr10	80755563	.	T	TG	97.69	PASS	AC=2;AF=0.091;AN=22;BaseQRankSum=2.966;DP=343;FS=5.468;HRun=0;HaplotypeScore=29.9531;InbreedingCoeff=0.5449;MQ=40.44;MQ0=99;MQRankSum=0.072;QD=9.77;ReadPosRankSum=0.788;VQSLOD=2.4193;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:39,0:21:60.18:0,60,767	0/0:39,0:11:33.11:0,33,450	./.	0/0:9,0:3:6.02:0,6,84	0/0:12,0:4:3.01:0,3,42	./.	0/0:24,0:9:18.06:0,18,251	./.	./.	0/0:20,0:5:9.03:0,9,125	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/0:22,0:6:15.05:0,15,209	0/0:20,0:4:9.03:0,9,125	0/0:28,0:13:18.02:0,18,229	./.	./.	0/0:10,0:1:3.01:0,3,42	1/1:6,4:4:12.04:178,12,0
chr10	80759830	.	A	AC	2349.16	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=8.105;DP=637;FS=6.690;HRun=1;HaplotypeScore=106.0640;InbreedingCoeff=0.6480;MQ=48.41;MQ0=18;MQRankSum=-14.734;QD=5.86;ReadPosRankSum=1.820;VQSLOD=0.6585;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:35:32.70:143,33,0	1/1:12,0:12:20.40:90,20,0	0/0:54,0:11:21.22:0,21,362	0/0:53,0:12:3.05:0,3,236	1/1:28,0:26:21.73:120,22,0	1/1:3,11:10:21.07:314,21,0	1/1:5,11:13:33.11:497,33,0	1/1:16,0:16:34.15:112,34,0	0/0:29,0:29:81.26:0,81,1114	0/1:24,0:21:22.26:57,0,22	1/1:11,0:10:0.67:19,1,0	0/0:25,0:25:69.20:0,69,929	1/1:15,0:13:26.62:127,27,0	1/1:29,0:29:34.25:182,34,0	1/1:27,0:25:44.40:220,44,0	0/1:20,0:16:23.78:66,0,24	1/1:20,0:17:10.44:55,10,0	1/1:8,0:6:4.41:15,4,0	1/1:10,0:7:13.44:47,13,0	1/1:18,0:15:26.92:119,27,0	0/1:25,0:18:2.18:21,0,2	0/0:20,0:18:51.17:0,51,705	0/0:21,0:21:60.16:0,60,811	0/0:34,0:33:87.29:0,87,1216	1/1:19,0:16:19.36:90,19,0	1/1:17,0:15:10.04:71,10,0	1/1:23,0:23:30.50:164,31,0	1/1:9,0:9:2.67:13,3,0
chr10	80759831	.	T	TG	14062.23	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-0.551;DP=647;FS=19.524;HRun=0;HaplotypeScore=67.6954;InbreedingCoeff=0.9543;MQ=48.65;MQ0=18;MQRankSum=-8.420;QD=34.30;ReadPosRankSum=2.975;VQSLOD=3.3249;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,34:36:69.23:1099,69,0	1/1:0,12:12:36.12:574,36,0	0/0:54,0:11:29.46:0,29,382	0/0:53,0:12:8.75:0,9,311	1/1:2,26:26:51.03:810,51,0	1/1:13,0:9:21.07:305,21,0	1/1:17,0:14:36.12:520,36,0	1/1:0,16:16:45.15:718,45,0	0/0:29,0:29:87.27:0,87,1184	1/1:2,21:20:60.20:948,60,0	1/1:3,11:13:21.07:335,21,0	0/0:26,0:26:75.22:0,75,996	1/1:2,13:13:33.11:526,33,0	1/1:0,28:28:72.25:1148,72,0	1/1:2,25:25:72.25:1147,72,0	1/1:7,15:18:3.18:628,3,0	1/1:3,17:17:39.13:623,39,0	1/1:1,7:6:18.06:288,18,0	1/1:2,10:7:21.07:332,21,0	1/1:2,17:16:33.11:526,33,0	1/1:7,18:18:44.53:718,45,0	0/0:19,0:18:51.17:0,51,713	0/0:22,0:22:60.19:0,60,822	0/0:34,0:33:87.29:0,87,1217	1/1:1,19:17:42.14:670,42,0	1/1:1,16:15:42.11:670,42,0	1/1:1,22:24:66.22:1045,66,0	1/1:0,9:9:27.09:431,27,0
chr10	80759872	.	TG	T	637.12	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.302;DP=630;FS=0.000;HRun=3;HaplotypeScore=112.4131;InbreedingCoeff=0.9951;MQ=58.87;MQ0=13;MQRankSum=-2.714;QD=16.77;ReadPosRankSum=-1.033;VQSLOD=2.7654;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:38:96.24:0,96,1321	0/0:12,0:12:33.11:0,33,474	0/0:31,0:16:44.09:0,44,477	0/0:43,0:17:25.12:0,25,474	0/0:28,0:26:66.05:0,66,896	1/1:0,15:13:27.08:333,27,0	1/1:4,19:23:36.04:426,36,0	0/0:25,0:22:66.16:0,66,891	0/0:24,0:24:69.23:0,69,989	0/0:26,0:24:72.24:0,72,1036	0/0:19,0:19:45.05:0,45,602	0/0:26,0:26:66.21:0,66,932	0/0:12,0:11:27.09:0,27,378	0/0:21,0:21:48.09:0,48,630	0/0:21,0:19:48.08:0,48,644	0/0:23,0:20:51.14:0,51,712	0/0:22,0:21:54.07:0,54,728	0/0:10,0:9:27.09:0,27,388	0/0:10,0:9:21.02:0,21,256	0/0:25,0:25:59.78:0,60,708	0/0:23,0:21:55.07:0,55,779	0/0:18,0:16:45.14:0,45,629	0/0:23,0:23:66.22:0,66,949	0/0:37,0:36:99:0,99,1386	0/0:16,0:15:36.11:0,36,502	0/0:21,0:21:60.19:0,60,847	0/0:24,0:24:69.15:0,69,946	0/0:11,0:11:33.11:0,33,475
chr10	80760210	.	A	AAAG	12242.29	PASS	AB=0.553;AC=36;AF=0.643;AN=56;BaseQRankSum=14.313;DP=373;FS=10.883;HRun=0;HaplotypeScore=137.2594;InbreedingCoeff=0.8151;MQ=63.00;MQ0=0;MQRankSum=-14.039;QD=45.51;ReadPosRankSum=1.001;VQSLOD=6.4971;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,10:14:39.13:674,39,0	1/1:1,7:8:24.06:396,24,0	0/0:6,0:6:18.06:0,18,315	0/0:7,0:7:18.06:0,18,311	1/1:8,24:32:65.91:1346,66,0	0/0:9,0:8:27.07:0,27,469	0/0:16,0:16:48.16:0,48,895	1/1:9,8:17:51.17:865,51,0	0/0:10,0:11:30.10:0,30,559	1/1:8,14:22:6.25:835,6,0	1/1:4,16:20:54.18:945,54,0	0/0:10,0:10:30.10:0,30,559	1/1:2,8:10:27.09:475,27,0	1/1:1,13:14:42.14:733,42,0	1/1:1,5:6:18.06:304,18,0	0/1:1,5:6:37.86:250,0,38	1/1:4,4:8:21.06:356,21,0	1/1:1,1:2:3.48:57,3,0	1/1:3,4:7:18.06:314,18,0	1/1:6,25:31:93.10:1554,93,0	1/1:1,2:3:9.03:159,9,0	0/0:10,0:10:30.09:0,30,529	0/0:24,0:24:69.24:0,69,1285	0/0:11,0:11:30.10:0,30,559	1/1:5,13:17:54.14:923,54,0	1/1:7,9:16:35.28:540,35,0	0/1:5,18:23:3.63:1019,0,4	1/1:3,9:12:27.09:498,27,0
chr10	80760212	.	A	ATT	9909.93	PASS	AB=0.545;AC=37;AF=0.661;AN=56;BaseQRankSum=13.702;DP=379;FS=9.972;HRun=1;HaplotypeScore=138.1407;InbreedingCoeff=0.8826;MQ=62.73;MQ0=0;MQRankSum=-13.335;QD=36.30;ReadPosRankSum=-0.047;VQSLOD=4.0198;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,10:14:42.12:537,42,0	1/1:0,7:7:21.07:283,21,0	0/0:6,0:6:17.79:0,18,230	0/0:7,0:7:17.08:0,17,189	1/1:5,24:29:81.06:1048,81,0	0/0:9,0:8:27.01:0,27,408	0/0:16,0:16:48.16:0,48,783	1/1:9,8:17:48.16:689,48,0	0/0:11,0:11:30.10:0,30,489	1/1:8,14:22:63.19:843,63,0	1/1:6,16:22:60.44:748,60,0	0/0:10,0:10:30.10:0,30,489	1/1:3,8:11:30.07:385,30,0	1/1:1,13:14:42.14:569,42,0	1/1:0,5:10:18.06:235,18,0	0/1:1,5:6:30.87:187,0,31	1/1:3,4:7:17.99:237,18,0	1/1:3,1:4:3.90:44,4,0	1/1:3,4:7:21.06:264,21,0	1/1:5,25:30:90.24:1207,90,0	1/1:1,2:3:9.03:120,9,0	0/0:10,0:10:30.09:0,30,465	0/0:25,0:25:72.23:0,72,1149	0/0:12,0:12:33.07:0,33,509	1/1:5,13:18:50.91:716,51,0	1/1:6,9:15:39.04:497,39,0	1/1:5,18:23:66.19:856,66,0	1/1:4,9:13:36:443,36,0
chr10	80761569	.	T	TAC	1174.85	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.027;DP=381;FS=4.809;HRun=0;HaplotypeScore=45.9272;InbreedingCoeff=0.9342;MQ=73.22;MQ0=0;MQRankSum=0.484;QD=35.60;ReadPosRankSum=0.588;VQSLOD=5.4906;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:30.10:0,30,377	0/0:4,0:4:12.04:0,12,151	0/0:17,0:16:36.10:0,36,438	0/0:17,0:13:14.44:0,14,218	0/0:13,0:13:36.11:0,36,453	1/1:2,16:18:42.14:698,42,0	1/1:1,14:15:36.12:598,36,0	0/0:30,0:29:74.94:0,75,875	0/0:12,0:12:33.07:0,33,416	0/0:21,0:21:63.18:0,63,762	0/0:6,0:6:18.04:0,18,214	0/0:6,0:6:12.02:0,12,137	0/0:9,0:9:27.09:0,27,340	0/0:7,0:7:21.07:0,21,265	0/0:9,0:9:27.09:0,27,340	0/0:6,0:6:18.06:0,18,227	0/0:15,0:15:39.12:0,39,491	0/0:22,0:23:63.03:0,63,769	0/0:19,0:19:36.11:0,36,453	0/0:16,0:16:42.13:0,42,530	0/0:15,0:15:45.14:0,45,568	0/0:10,0:10:30.10:0,30,378	0/0:11,0:12:30.08:0,30,365	0/0:4,0:4:12.04:0,12,150	0/0:16,0:16:48.13:0,48,579	0/0:14,0:14:39.12:0,39,492	0/0:17,0:17:39.12:0,39,490	0/0:18,0:18:48.15:0,48,605
chr10	80762956	.	TTATTATGTGATGAA	T	695.34	PASS	AC=24;AF=0.500;AN=48;BaseQRankSum=1.013;DP=504;FS=6.784;HRun=0;HaplotypeScore=212.2332;InbreedingCoeff=0.7400;MQ=75.78;MQ0=0;MQRankSum=-0.296;QD=26.74;ReadPosRankSum=-6.193;VQSLOD=-0.1265;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:99:0,123,6830	1/1:1,0:1:2.99:24,3,0	0/0:38,0:36:93.03:0,93,5170	0/0:26,0:26:4.90:0,5,3424	1/1:2,0:2:6.02:113,6,0	0/0:20,0:19:60.17:0,60,3654	0/0:50,0:50:99:0,147,9072	./.	0/0:47,0:47:99:0,139,8787	1/1:1,0:1:3.01:53,3,0	1/1:1,0:1:3.01:47,3,0	0/0:42,0:42:99:0,123,8198	0/0:41,0:41:99:0,108,5629	0/0:44,0:44:93.28:0,93,4673	1/1:4,0:4:11.99:140,12,0	1/1:1,0:1:3:25,3,0	1/1:2,0:2:3.01:44,3,0	1/1:2,0:2:6:80,6,0	1/1:3,0:3:9:89,9,0	./.	1/1:4,0:4:6.02:98,6,0	0/0:46,0:46:99:0,138,8847	0/0:28,0:28:84.29:0,84,5257	0/0:42,0:42:99:0,126,8001	1/1:3,0:3:6.01:89,6,0	1/1:2,0:2:6.01:70,6,0	./.	./.
chr10	80762958	.	A	AC	243.78	PASS	AC=20;AF=0.455;AN=44;BaseQRankSum=4.628;DP=496;FS=20.293;HRun=0;HaplotypeScore=89.2086;InbreedingCoeff=0.7050;MQ=76.15;MQ0=0;MQRankSum=-0.831;QD=14.34;ReadPosRankSum=-4.932;VQSLOD=2.0106;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:99:0,108,1470	./.	0/0:38,0:36:99:0,105,1352	0/0:26,1:27:31.84:0,32,873	1/1:2,0:2:6:66,6,0	0/0:19,0:18:57.18:0,57,779	0/0:49,0:49:99:0,141,1936	./.	0/0:49,0:49:99:0,142,1935	1/1:1,0:1:3:25,3,0	1/1:1,0:1:2.99:24,3,0	0/0:42,0:42:99:0,123,1719	0/0:41,0:41:99:0,105,1442	0/0:43,0:43:84.28:0,84,1172	1/1:1,0:1:3.01:43,3,0	./.	1/1:0,2:2:3.01:45,3,0	1/1:0,1:1:3.01:44,3,0	1/1:2,0:2:2.87:15,3,0	./.	1/1:4,0:4:5.99:49,6,0	0/0:46,0:46:99:0,138,1914	0/0:29,0:29:84.27:0,84,1159	0/0:42,0:42:99:0,123,1720	1/1:0,2:2:3.01:45,3,0	1/1:0,1:1:3.01:43,3,0	./.	./.
chr10	80762984	.	GCTGTGTGATGGCCA	G	5425.13	PASS	AC=8;AF=0.267;AN=30;BaseQRankSum=10.046;DP=460;FS=2.866;HRun=0;HaplotypeScore=274.5079;InbreedingCoeff=0.8472;MQ=76.25;MQ0=2;MQRankSum=-9.839;QD=46.77;ReadPosRankSum=2.275;VQSLOD=4.4654;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,23:39:36.12:1427,36,0	./.	0/0:35,0:28:33.09:0,33,1196	0/0:36,0:33:58.44:0,58,2060	./.	0/0:20,0:20:48.16:0,48,2741	0/0:46,0:46:99:0,108,6064	0/0:1,0:1:3.01:0,3,41	0/0:50,0:50:99:0,135,8438	./.	./.	0/0:38,0:38:90.31:0,90,5626	1/1:10,25:35:51.18:2024,51,0	1/1:6,34:40:51.17:1958,51,0	./.	./.	./.	1/1:1,0:1:2.88:15,3,0	./.	./.	0/0:2,0:2:4.88:0,5,20	0/0:45,0:45:81.28:0,81,4491	0/0:22,0:22:33.11:0,33,1931	0/0:43,0:43:99:0,108,6430	./.	./.	./.	./.
chr10	80763021	.	TATCCACTGC	T	104.37	PASS	AC=6;AF=0.188;AN=32;BaseQRankSum=3.441;DP=461;FS=2.018;HRun=0;HaplotypeScore=278.2728;InbreedingCoeff=0.7350;MQ=84.01;MQ0=0;MQRankSum=-2.822;QD=13.05;ReadPosRankSum=0.473;VQSLOD=2.5134;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:77.89:0,78,2324	./.	0/0:33,0:32:96.26:0,96,3530	0/0:31,0:30:87.24:0,87,3023	./.	0/0:18,0:18:51.18:0,51,2406	0/0:51,0:51:99:0,151,6721	./.	0/0:47,0:47:99:0,141,6635	./.	./.	0/0:43,0:43:99:0,129,6088	0/0:34,0:34:82.85:0,83,2087	0/0:45,0:45:95.94:0,96,2708	./.	./.	1/1:1,0:1:3.01:39,3,0	1/1:1,1:2:6.02:122,6,0	./.	./.	0/0:0,4:4:2.94:0,3,23	0/0:33,0:33:99:0,99,4531	0/0:26,0:26:72.06:0,72,3565	0/0:49,0:49:99:0,147,7154	./.	./.	1/1:0,5:5:3.01:46,3,0	./.
chr10	80763055	.	CTG	C	4941.78	PASS	AB=0.586;AC=30;AF=0.536;AN=56;BaseQRankSum=14.777;DP=636;FS=9.329;HRun=0;HaplotypeScore=167.4155;InbreedingCoeff=0.8272;MQ=59.22;MQ0=15;MQRankSum=-14.211;QD=28.90;ReadPosRankSum=-2.872;VQSLOD=4.9894;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:96.33:0,96,1727	1/1:0,7:7:18.04:251,18,0	0/0:48,0:20:52.21:0,52,792	0/0:41,0:24:61.89:0,62,1012	1/1:0,11:11:17.92:251,18,0	0/0:19,0:19:54.19:0,54,972	0/0:46,0:46:99:0,132,2329	0/1:2,4:5:5.66:153,0,6	0/0:34,0:34:87.26:0,87,1506	1/1:0,11:11:30.10:420,30,0	1/1:0,10:10:12.04:168,12,0	0/0:47,0:47:99:0,138,2447	0/0:41,0:41:93.28:0,93,1633	0/0:40,0:40:99:0,102,1827	1/1:0,17:17:48.16:665,48,0	1/1:0,8:8:24.08:335,24,0	1/1:0,7:7:12.04:168,12,0	0/1:3,9:12:77.51:305,0,78	1/1:0,7:7:21.07:294,21,0	1/1:0,8:8:9.03:126,9,0	1/1:1,31:32:20.15:590,20,0	0/0:35,0:35:99:0,99,1742	0/0:26,0:26:66.21:0,66,1149	0/0:45,0:45:99:0,123,2207	1/1:0,11:11:21.07:294,21,0	1/1:1,9:9:27.09:378,27,0	1/1:0,13:13:36.12:503,36,0	1/1:0,1:1:3.01:42,3,0
chr10	80763167	.	TCGGC	T	508.43	PASS	AB=0.912;AC=5;AF=0.089;AN=56;BaseQRankSum=6.100;DP=885;FS=4.084;HRun=0;HaplotypeScore=160.2754;InbreedingCoeff=0.8018;MQ=63.16;MQ0=1;MQRankSum=-4.931;QD=11.56;ReadPosRankSum=-1.658;VQSLOD=3.0999;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,175,4695	0/0:19,0:19:57.20:0,57,1497	0/0:17,2:19:42.60:0,43,1181	0/1:28,1:27:0.04:0,0,1186	0/0:27,0:27:81.26:0,81,2207	1/1:1,6:7:5.01:301,5,0	1/1:0,6:6:15.05:314,15,0	0/0:20,0:20:57.14:0,57,1425	0/0:41,0:41:99:0,123,3405	0/0:42,0:42:99:0,126,3442	0/0:19,0:19:57.18:0,57,1588	0/0:40,0:40:99:0,120,3290	0/0:42,0:42:99:0,120,3317	0/0:47,0:47:99:0,138,3463	0/0:36,0:36:99:0,108,2726	0/0:37,0:37:99:0,111,3086	0/0:30,0:30:79.51:0,80,2202	0/0:28,0:28:78.27:0,78,2203	0/0:23,0:23:66.21:0,66,1810	0/0:26,0:26:78.27:0,78,2255	0/0:93,0:93:99:0,231,6429	0/0:20,0:20:60.19:0,60,1596	0/0:22,0:22:66.23:0,66,1910	0/0:44,0:44:99:0,132,3685	0/0:34,0:34:99:0,99,2753	0/0:36,0:36:99:0,108,2978	0/0:27,0:27:81.26:0,81,2281	0/0:8,0:8:24.08:0,24,678
chr10	80765416	.	CA	C	15711.80	PASS	AB=1.000;AC=55;AF=0.982;AN=56;BaseQRankSum=3.291;DP=919;FS=2.499;HRun=1;HaplotypeScore=252.6064;InbreedingCoeff=-0.0188;MQ=52.46;MQ0=0;MQRankSum=-2.407;QD=17.10;ReadPosRankSum=6.637;VQSLOD=4.7859;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:79.88:542,80,0	1/1:25,1:26:64.93:451,65,0	1/1:24,1:23:39.95:239,40,0	0/1:16,0:15:16.85:113,0,17	1/1:21,0:21:59.30:421,59,0	1/1:18,0:18:50.48:364,50,0	1/1:36,0:36:94.49:638,94,0	1/1:25,0:25:71.90:408,72,0	1/1:47,0:47:99:849,121,0	1/1:63,0:63:99:921,122,0	1/1:21,0:21:27.97:342,28,0	1/1:40,0:40:81.51:689,82,0	1/1:43,0:43:99:895,122,0	1/1:40,1:41:99:776,110,0	1/1:56,0:56:99:1017,145,0	1/1:44,0:44:99:768,111,0	1/1:21,0:21:61.59:371,62,0	1/1:25,0:25:64.92:434,65,0	1/1:23,0:23:55.13:321,55,0	1/1:22,1:23:63.46:403,63,0	1/1:61,0:61:99:990,139,0	1/1:28,0:28:52.31:516,52,0	1/1:15,0:15:16.78:272,17,0	1/1:51,0:51:99:874,132,0	1/1:27,0:27:73.96:516,74,0	1/1:44,0:44:99:756,123,0	1/1:33,1:33:91.73:636,92,0	1/1:12,0:13:15:188,15,0
chr10	80765664	.	TAGTAGTGGAC	T	15439.62	PASS	AB=0.685;AC=36;AF=0.643;AN=56;BaseQRankSum=12.212;DP=799;FS=1.775;HRun=0;HaplotypeScore=253.4611;InbreedingCoeff=0.7727;MQ=58.73;MQ0=2;MQRankSum=-12.862;QD=30.70;ReadPosRankSum=1.944;VQSLOD=4.4803;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,25:39:42.14:1267,42,0	1/1:9,8:17:14.74:452,15,0	0/0:37,0:28:27.56:0,28,952	0/0:54,0:48:39.77:0,40,1983	1/1:8,6:14:5.81:172,6,0	0/0:15,0:15:33.11:0,33,1431	0/0:38,0:38:75.26:0,75,3545	1/1:25,13:38:37.36:813,37,0	0/0:37,0:37:75.24:0,75,3370	1/1:20,10:30:27.08:744,27,0	1/1:9,5:14:5.84:180,6,0	0/0:40,0:40:84.29:0,84,3850	1/1:15,24:39:60.21:1790,60,0	1/1:17,15:32:39.13:1152,39,0	1/1:16,26:42:72.08:2141,72,0	1/1:10,23:33:57.20:1720,57,0	1/1:14,18:32:18.06:518,18,0	0/1:11,10:21:56.53:431,0,57	1/1:14,5:20:18.03:386,18,0	1/1:8,7:15:10.28:358,10,0	0/1:25,20:45:18.03:496,0,18	0/0:18,0:18:15.05:0,15,457	0/0:12,0:12:6.02:0,6,197	0/0:45,0:45:99:0,105,5041	1/1:8,6:14:9.03:271,9,0	1/1:11,14:25:39.10:1034,39,0	1/1:12,17:29:39.13:1177,39,0	1/1:0,4:4:12.04:337,12,0
chr10	80767192	.	ATCCATCACAGTG	A	562.37	PASS	AB=0.725;AC=2;AF=0.036;AN=56;BaseQRankSum=6.352;DP=1028;FS=0.000;HRun=0;HaplotypeScore=362.8568;InbreedingCoeff=-0.0371;MQ=63.77;MQ0=1;MQRankSum=-3.714;QD=6.62;ReadPosRankSum=-2.939;VQSLOD=0.9717;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,6695	0/0:23,0:23:69.16:0,69,2860	0/0:28,0:24:54.04:0,54,1556	0/0:45,0:43:99:0,114,3173	0/0:16,0:16:45.14:0,45,2333	0/1:16,18:34:99:240,0,1127	0/1:38,13:51:99:411,0,2183	0/0:48,0:48:99:0,144,5546	0/0:56,0:56:99:0,169,8003	0/0:52,0:52:99:0,157,7849	0/0:13,0:13:36.09:0,36,2031	0/0:58,0:58:99:0,175,8603	0/0:52,0:52:99:0,156,7419	0/0:32,0:32:96.29:0,96,4371	0/0:51,0:51:99:0,150,7000	0/0:42,0:42:99:0,126,6086	0/0:35,0:35:99:0,105,5750	0/0:22,0:22:66.21:0,66,3326	0/0:23,0:22:66.20:0,66,2794	0/0:21,0:21:60.19:0,60,2774	0/0:65,0:65:99:0,192,9176	0/0:33,0:33:90.30:0,90,4377	0/0:22,0:22:66.23:0,66,3728	0/0:37,0:37:99:0,103,4893	0/0:39,0:39:99:0,117,6223	0/0:33,0:33:96.33:0,96,5488	0/0:32,0:32:96.33:0,96,4775	0/0:16,0:16:28.84:0,29,2371
chr10	80768869	.	AT	A	674.96	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.227;DP=473;FS=0.000;HRun=7;HaplotypeScore=45.3615;InbreedingCoeff=0.8378;MQ=75.52;MQ0=0;MQRankSum=0.735;QD=18.24;ReadPosRankSum=0.186;VQSLOD=2.8594;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.20:0,63,793	0/0:2,0:2:6.02:0,6,75	0/0:10,0:10:0.82:0,1,240	0/0:12,0:12:20.51:0,21,218	0/0:25,0:25:72.23:0,72,906	1/1:2,17:19:39.09:398,39,0	1/1:2,16:18:39.09:398,39,0	0/0:31,0:31:81.25:0,81,1002	0/0:14,0:14:42.11:0,42,513	0/0:26,0:26:72.22:0,72,895	0/0:16,0:16:48.15:0,48,604	0/0:13,0:13:39.12:0,39,491	0/0:11,0:11:33.09:0,33,399	0/0:15,0:15:42.13:0,42,528	0/0:22,0:22:57.18:0,57,715	0/0:14,0:14:39.12:0,39,489	0/0:22,0:22:66.21:0,66,830	0/0:18,0:18:44.85:0,45,566	0/0:16,0:16:45.14:0,45,556	0/0:24,0:24:63.20:0,63,784	0/0:6,0:6:15.04:0,15,176	0/0:12,0:12:33.06:0,33,395	0/0:17,0:17:39.11:0,39,477	0/0:13,0:13:39.12:0,39,491	0/0:23,0:23:69.17:0,69,838	0/0:20,0:20:60.18:0,60,744	0/0:24,0:24:69.21:0,69,855	0/0:9,0:9:24.08:0,24,302
chr10	80769068	.	ATT	A	8273.16	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=4.889;DP=336;FS=6.673;HRun=8;HaplotypeScore=56.7294;InbreedingCoeff=0.9094;MQ=79.21;MQ0=1;MQRankSum=-1.593;QD=29.03;ReadPosRankSum=1.620;VQSLOD=4.4730;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:12:27.08:329,27,0	1/1:1,6:7:15.05:183,15,0	0/0:12,0:11:5.54:0,6,119	0/0:5,0:5:8.61:0,9,106	1/1:2,17:19:48.15:582,48,0	1/1:1,0:8:17.89:130,18,0	1/1:1,1:7:17.81:133,18,0	1/1:1,23:24:69.20:828,69,0	0/0:7,0:7:21.06:0,21,307	1/1:1,18:19:54.16:657,54,0	1/1:1,17:17:39.11:472,39,0	0/0:6,0:6:18.06:0,18,303	1/1:1,9:10:18.06:220,18,0	1/1:1,13:14:33.10:403,33,0	1/1:0,10:10:27.08:329,27,0	1/1:1,5:6:15.04:183,15,0	1/1:3,19:22:50.89:622,51,0	1/1:4,11:15:27.08:329,27,0	1/1:4,9:13:27.05:314,27,0	1/1:0,10:10:30.09:366,30,0	1/1:1,0:1:3.01:36,3,0	0/0:6,0:6:18.06:0,18,302	0/0:9,0:9:21.07:0,21,347	0/0:6,0:6:9.03:0,9,152	1/1:1,11:12:33.10:403,33,0	1/1:1,24:25:66.19:803,66,0	1/1:2,17:19:45.14:549,45,0	1/1:0,13:13:33.10:403,33,0
chr10	80769343	.	T	TG	1790	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=-3.278;DP=517;FS=7.091;HRun=7;HaplotypeScore=70.5347;InbreedingCoeff=0.9956;MQ=80.15;MQ0=0;MQRankSum=-2.910;QD=25.94;ReadPosRankSum=0.783;VQSLOD=4.2958;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:36:81.11:957,81,0	0/0:7,0:7:21.03:0,21,203	0/0:23,0:23:29.27:0,29,347	0/0:16,0:16:25.70:0,26,273	0/0:19,0:19:54.08:0,54,519	0/0:1,0:12:20.37:0,20,60	0/0:2,0:26:40.74:0,41,119	0/0:16,0:16:33.01:0,33,309	0/0:16,0:16:42.06:0,42,406	0/0:18,0:18:48.06:0,48,460	0/0:15,0:15:42.04:0,42,393	0/0:18,0:18:45.06:0,45,434	1/1:2,12:14:33.10:396,33,0	1/1:1,18:19:48.15:579,48,0	0/0:17,0:17:48.05:0,48,452	0/0:25,0:25:66.10:0,66,637	0/0:32,0:32:87.12:0,87,832	0/0:17,0:17:48.07:0,48,464	0/0:19,0:19:42.05:0,42,402	0/0:13,0:13:33.04:0,33,313	0/0:32,0:32:90.14:0,90,868	0/0:11,0:11:33.05:0,33,318	0/0:12,0:12:36.06:0,36,347	0/0:32,0:32:87.13:0,87,840	0/0:14,0:14:42.07:0,42,405	0/0:16,0:16:42.06:0,42,405	0/0:22,0:22:63.06:0,63,597	./.
chr10	80769720	.	CT	C	8755.23	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=11.047;DP=518;FS=6.531;HRun=9;HaplotypeScore=54.0151;InbreedingCoeff=0.9548;MQ=71.93;MQ0=0;MQRankSum=-0.358;QD=22.86;ReadPosRankSum=1.501;VQSLOD=5.7561;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:66.03:604,66,0	1/1:0,8:8:24.01:220,24,0	0/0:9,0:9:2.04:0,2,91	0/0:10,0:10:8.96:0,9,76	1/1:2,24:27:71.07:637,71,0	0/0:26,0:26:72.18:0,72,817	0/0:10,0:10:30.08:0,30,336	1/1:3,18:21:51.01:462,51,0	0/0:19,0:19:57.16:0,57,650	1/1:7,23:30:69.03:632,69,0	1/1:1,22:23:57.02:522,57,0	0/0:13,0:13:30.08:0,30,337	1/1:2,17:19:51.03:467,51,0	1/1:1,20:21:60.03:549,60,0	1/1:2,16:18:48.02:439,48,0	1/1:5,16:21:42.02:384,42,0	1/1:6,10:16:27:247,27,0	1/1:1,16:17:33.02:302,33,0	1/1:5,17:22:51.02:467,51,0	1/1:3,28:31:81.04:741,81,0	1/1:1,7:8:21:192,21,0	0/0:15,0:15:42.12:0,42,485	0/0:18,0:18:42.09:0,42,463	0/0:15,0:15:39.12:0,39,450	1/1:3,15:18:48.02:439,48,0	1/1:0,16:16:48.01:435,48,0	1/1:2,34:36:96:879,96,0	1/1:1,5:6:15.01:137,15,0
chr10	80771283	.	C	CGTGTGT	3575.44	PASS	AB=1.000;AC=41;AF=0.788;AN=52;BaseQRankSum=1.255;DP=573;FS=12.665;HRun=0;HaplotypeScore=159.3687;InbreedingCoeff=0.3886;MQ=66.52;MQ0=8;MQRankSum=-1.269;QD=8.30;ReadPosRankSum=-4.065;VQSLOD=0.0503;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:19.07:374,19,0	1/1:3,2:7:3.01:78,3,0	./.	./.	1/1:22,0:22:3.46:25,3,0	1/1:24,0:22:15.37:153,15,0	0/1:22,0:23:14.78:15,0,46	1/1:24,0:23:8.88:51,9,0	0/0:17,0:17:15.93:0,16,248	1/1:17,0:17:9.91:179,10,0	1/1:12,0:12:6.02:118,6,0	0/1:22,0:22:9.67:10,0,135	1/1:4,6:12:4.25:99,4,0	1/1:22,0:22:8.86:215,9,0	1/1:11,0:11:6.49:139,6,0	1/1:23,0:23:17.85:250,18,0	1/1:13,6:19:6.02:170,6,0	0/1:16,0:15:25.17:240,0,25	1/1:20,0:19:26.95:542,27,0	1/1:16,4:20:5.93:113,6,0	1/1:35,0:35:12.67:140,13,0	0/0:16,0:16:3.01:0,3,60	0/0:15,0:15:8.77:0,9,181	0/0:26,0:26:25.82:0,26,362	1/1:21,0:28:3.47:26,3,0	1/1:23,0:20:27.29:470,27,0	1/1:22,0:22:10.58:135,11,0	1/1:3,0:3:5.87:34,6,0
chr10	80774431	.	AT	A	947.55	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.877;DP=542;FS=5.675;HRun=9;HaplotypeScore=56.2207;InbreedingCoeff=0.9820;MQ=81.88;MQ0=0;MQRankSum=-0.096;QD=19.74;ReadPosRankSum=0.940;VQSLOD=4.0854;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:10:23.97:211,24,0	0/0:5,0:5:15.03:0,15,163	0/0:19,1:20:20.64:0,21,466	0/0:16,0:14:13.98:0,14,293	0/0:33,0:34:99:0,99,1122	0/0:29,0:29:79.86:0,80,516	0/0:22,0:22:62.11:0,62,401	0/0:25,0:25:69.18:0,69,779	0/0:22,0:22:57.16:0,57,648	0/0:33,0:34:90.07:0,90,1005	0/0:18,1:19:26.70:0,27,561	0/0:18,0:18:54.16:0,54,623	1/1:4,17:21:51.01:467,51,0	1/1:0,17:17:45.02:412,45,0	0/0:17,0:17:39.12:0,39,450	0/0:15,0:14:36.07:0,36,387	0/0:10,0:10:30.05:0,30,331	0/0:10,0:10:24.04:0,24,262	0/0:11,0:11:30.09:0,30,346	0/0:25,1:26:41.72:0,42,716	0/0:19,0:19:57.17:0,57,658	0/0:20,0:20:57.15:0,57,647	0/0:23,0:23:54.16:0,54,623	0/0:17,0:17:48.13:0,48,544	0/0:28,0:29:78.06:0,78,873	0/0:21,0:21:63.19:0,63,727	0/0:24,0:24:66.14:0,66,729	0/0:8,0:8:21.06:0,21,242
chr10	80775855	.	GT	G	8422.48	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=12.352;DP=545;FS=0.000;HRun=8;HaplotypeScore=76.2907;InbreedingCoeff=0.9990;MQ=84.87;MQ0=0;MQRankSum=-3.449;QD=24.34;ReadPosRankSum=3.531;VQSLOD=5.4619;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:27.05:0,27,310	1/1:2,10:12:30.05:290,30,0	0/0:24,0:25:41.03:0,41,485	0/0:16,0:16:23.96:0,24,254	1/1:2,27:29:72.10:695,72,0	0/0:20,0:20:57.15:0,57,674	0/0:18,0:18:42.13:0,42,507	1/1:7,27:34:84.12:810,84,0	0/0:16,0:16:42.13:0,42,507	1/1:5,21:26:63.10:608,63,0	1/1:2,25:27:69.10:666,69,0	0/0:19,0:19:54.17:0,54,652	0/0:12,0:12:30.09:0,30,362	0/0:10,0:10:30.09:0,30,362	1/1:1,22:23:60.09:579,60,0	1/1:1,17:18:48.08:464,48,0	1/1:0,18:18:45.07:435,45,0	1/1:1,10:11:30.05:290,30,0	1/1:5,10:15:30.04:290,30,0	1/1:2,32:34:93.14:898,93,0	1/1:1,10:11:30.04:290,30,0	0/0:16,0:16:45.14:0,45,544	0/0:22,0:22:57.17:0,57,678	0/0:15,0:15:42.12:0,42,497	1/1:3,15:18:42.06:406,42,0	1/1:4,17:21:54.08:521,54,0	1/1:4,33:37:93.14:898,93,0	1/1:3,9:12:30.03:283,30,0
chr10	80776766	.	G	GA	1388.69	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-3.364;DP=514;FS=3.392;HRun=6;HaplotypeScore=81.7642;InbreedingCoeff=0.8844;MQ=72.42;MQ0=0;MQRankSum=-1.895;QD=23.54;ReadPosRankSum=-2.019;VQSLOD=2.2912;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:51.13:625,51,0	0/0:8,0:8:20.43:0,20,118	0/0:11,0:11:24.04:0,24,236	0/1:9,0:9:1.90:2,0,105	0/0:37,0:37:71.76:0,72,529	0/0:26,0:26:69.15:0,69,704	0/0:8,0:8:21.04:0,21,214	0/0:21,0:21:51.49:0,51,261	0/0:18,0:18:54.12:0,54,551	0/0:18,0:18:44.73:0,45,222	0/0:30,0:30:78.26:0,78,436	0/0:10,0:10:21.04:0,21,214	1/1:1,13:14:36.12:453,36,0	1/1:2,14:16:36.12:453,36,0	0/0:20,0:20:20.17:0,20,192	0/0:15,0:15:43.20:0,43,229	0/0:15,0:15:43.82:0,44,264	0/0:22,0:22:41.13:0,41,311	0/0:23,0:23:17.01:0,17,258	0/0:35,0:35:95.93:0,96,539	0/0:10,0:10:29.32:0,29,177	0/0:17,0:17:45.08:0,45,452	0/0:19,0:19:54.12:0,54,551	0/0:8,0:8:24.05:0,24,245	0/0:25,0:25:34.06:0,34,282	0/0:27,0:27:66.63:0,67,342	0/0:25,0:25:67.08:0,67,385	0/0:7,0:7:20.48:0,20,120
chr10	80777346	.	TCAAAAGAGCACAATTAA	T	5695.59	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.232;DP=626;FS=2.914;HRun=0;HaplotypeScore=277.7378;InbreedingCoeff=0.9941;MQ=66.99;MQ0=1;MQRankSum=-10.347;QD=99.92;ReadPosRankSum=2.577;VQSLOD=4.5765;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,21:26:54.19:2498,54,0	0/0:12,0:12:36.12:0,36,2838	0/0:18,0:17:45.15:0,45,3070	0/0:23,0:21:54.18:0,54,3372	0/0:21,0:21:63.22:0,63,4971	0/0:31,0:31:87.30:0,87,6362	0/0:23,0:23:57.18:0,57,3548	0/0:30,0:30:87.28:0,87,5973	0/0:20,0:20:51.17:0,51,3830	0/0:26,0:26:72.25:0,72,5420	0/0:22,0:22:57.20:0,57,4666	0/0:30,0:30:84.27:0,84,6109	1/1:2,13:15:30.10:1454,30,0	1/1:5,11:16:36.12:1744,36,0	0/0:28,0:28:78.25:0,78,5667	0/0:22,0:22:63.22:0,63,4923	0/0:22,0:22:63.22:0,63,5097	0/0:20,0:20:60.21:0,60,4584	0/0:22,0:22:57.20:0,57,4290	0/0:24,0:24:72.24:0,72,5193	0/0:26,0:26:69.24:0,69,5268	0/0:26,0:26:78.25:0,78,5542	0/0:19,0:19:51.18:0,51,3941	0/0:27,0:27:75.26:0,75,5839	0/0:20,0:20:57.20:0,57,4163	0/0:30,0:30:90.31:0,90,6859	0/0:22,0:22:66.23:0,66,5164	0/0:5,0:5:15.05:0,15,1128
chr10	80777449	.	G	GA	2144.36	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.103;DP=583;FS=1.728;HRun=4;HaplotypeScore=129.1932;InbreedingCoeff=0.9986;MQ=73.75;MQ0=0;MQRankSum=-7.418;QD=33.51;ReadPosRankSum=4.139;VQSLOD=2.3839;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:72.24:984,72,0	0/0:10,0:10:30.07:0,30,329	0/0:23,0:21:60.17:0,60,677	0/0:12,0:12:30.05:0,30,324	0/0:31,0:31:90.21:0,90,990	0/0:19,0:19:54.15:0,54,612	0/0:14,0:14:36.10:0,36,408	0/0:38,0:38:99:0,102,1134	0/0:20,0:20:57.16:0,57,646	0/0:25,0:25:72.14:0,72,786	0/0:19,0:19:54.13:0,54,600	0/0:21,0:21:63.16:0,63,704	1/1:2,15:17:42.14:574,42,0	1/1:2,19:21:54.18:729,54,0	0/0:27,0:27:78.21:0,78,875	0/0:16,0:16:45.13:0,45,510	0/0:24,0:24:66.19:0,66,748	0/0:12,0:12:36.10:0,36,406	0/0:23,0:22:54.08:0,54,585	0/0:26,0:26:78.21:0,78,875	0/0:17,0:17:51.10:0,51,556	0/0:31,0:31:90.23:0,90,1000	0/0:24,0:24:69.20:0,69,782	0/0:14,0:14:36.10:0,36,408	0/0:18,0:18:54.13:0,54,601	0/0:24,1:25:31.15:0,31,732	0/0:22,0:22:66.17:0,66,738	0/0:8,0:8:24.07:0,24,272
chr10	80777570	.	C	CAAAT	2950.28	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.589;DP=568;FS=4.653;HRun=0;HaplotypeScore=109.3820;InbreedingCoeff=0.9966;MQ=77.32;MQ0=0;MQRankSum=-5.801;QD=60.21;ReadPosRankSum=-0.041;VQSLOD=5.0784;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:17:48.06:1100,48,0	0/0:8,0:8:24.08:0,24,440	0/0:25,0:25:58.37:0,58,1075	0/0:10,0:10:27.09:0,27,481	0/0:41,0:41:99:0,114,2093	0/0:18,0:18:54.17:0,54,966	0/0:7,0:7:21.06:0,21,361	0/0:37,0:37:99:0,105,1955	0/0:21,0:21:63.19:0,63,1113	0/0:23,0:23:66.22:0,66,1205	0/0:38,0:38:99:0,111,2039	0/0:16,0:16:45.13:0,45,777	1/1:2,10:12:27.09:716,27,0	1/1:2,18:20:48.16:1277,48,0	0/0:16,0:16:42.59:0,43,752	0/0:13,0:13:39.13:0,39,727	0/0:26,0:26:69.22:0,69,1254	0/0:16,0:16:36.08:0,36,671	0/0:14,0:14:42.13:0,42,722	0/0:35,0:35:99:0,105,1927	0/0:9,0:9:27.08:0,27,472	0/0:23,0:23:69.24:0,69,1269	0/0:17,0:17:48.15:0,48,864	0/0:18,0:18:45.15:0,45,831	0/0:22,0:22:60.19:0,60,1088	0/0:26,0:26:78.27:0,78,1455	0/0:20,0:20:54.19:0,54,1007	0/0:20,0:20:57.20:0,57,1052
chr10	80778887	.	AC	A	2682.39	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.980;DP=716;FS=2.778;HRun=1;HaplotypeScore=80.4406;InbreedingCoeff=0.9964;MQ=63.16;MQ0=7;MQRankSum=1.510;QD=33.95;ReadPosRankSum=2.618;VQSLOD=3.7902;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,37:39:99:1357,99,0	0/0:9,0:9:27.09:0,27,423	0/0:31,0:24:27.70:0,28,686	0/0:38,0:29:76.10:0,76,1012	0/0:29,0:29:87.30:0,87,1383	0/0:26,0:26:78.27:0,78,1240	0/0:24,0:24:72.25:0,72,1150	0/0:27,0:27:81.23:0,81,1264	0/0:25,0:25:75.24:0,75,1150	0/0:28,0:28:84.20:0,84,1232	0/0:28,0:28:75.25:0,75,1175	0/0:32,0:32:96.26:0,96,1454	1/1:0,16:16:42.14:587,42,0	1/1:0,24:24:63.21:881,63,0	0/0:26,0:26:78.25:0,78,1217	0/0:24,0:24:72.21:0,72,1101	0/0:26,0:26:68.08:0,68,1093	0/0:16,0:16:48.14:0,48,725	0/0:21,0:17:51.16:0,51,791	0/0:40,0:40:99:0,114,1784	0/0:26,0:26:72.24:0,72,1129	0/0:27,0:27:81.23:0,81,1248	0/0:27,0:27:75.25:0,75,1166	0/0:21,0:21:60.18:0,60,915	0/0:17,0:17:51.16:0,51,792	0/0:22,0:22:66.23:0,66,1053	0/0:41,0:41:99:0,120,1882	0/0:6,0:6:18.03:0,18,261
chr10	80779116	.	TA	T	11267.73	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=5.517;DP=572;FS=3.638;HRun=3;HaplotypeScore=62.8904;InbreedingCoeff=0.9998;MQ=71.05;MQ0=1;MQRankSum=-2.052;QD=34.14;ReadPosRankSum=2.507;VQSLOD=5.5720;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.19:0,57,819	1/1:1,11:12:33.10:409,33,0	0/0:28,0:27:77.27:0,77,1011	0/0:20,0:18:49.71:0,50,683	1/1:1,29:30:75.23:930,75,0	0/0:26,0:26:72.24:0,72,1037	0/0:10,0:10:30.10:0,30,432	1/1:0,24:24:69.21:845,69,0	0/0:19,0:19:54.18:0,54,778	1/1:2,18:20:54.16:658,54,0	1/1:1,20:21:60.19:744,60,0	0/0:21,0:21:63.20:0,63,888	0/0:26,0:26:78.26:0,78,1123	0/0:19,0:19:51.16:0,51,716	1/1:1,25:26:69.22:856,69,0	1/1:2,12:14:33.10:409,33,0	1/1:0,18:18:54.17:669,54,0	1/1:1,20:21:57.18:706,57,0	1/1:0,16:15:45.14:555,45,0	1/1:1,23:24:63.20:781,63,0	1/1:2,22:24:66.21:818,66,0	0/0:19,0:19:57.19:0,57,821	0/0:24,0:23:69.22:0,69,974	0/0:11,0:11:33.11:0,33,475	1/1:0,19:19:54.17:670,54,0	1/1:0,25:25:75.22:916,75,0	1/1:0,25:25:72.23:893,72,0	1/1:0,11:11:33.10:409,33,0
chr10	80780073	.	T	TA	7181.61	PASS	AC=30;AF=0.556;AN=54;BaseQRankSum=13.488;DP=437;FS=3.371;HRun=8;HaplotypeScore=98.1016;InbreedingCoeff=0.9928;MQ=80.62;MQ0=0;MQRankSum=-1.347;QD=27.94;ReadPosRankSum=-0.458;VQSLOD=4.3701;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.02:0,42,384	1/1:2,4:6:12.04:138,12,0	0/0:11,0:11:17.99:0,18,164	0/0:15,0:15:36.01:0,36,329	1/1:2,17:19:51.07:556,51,0	0/0:20,0:19:47.98:0,48,427	0/0:13,0:13:31.44:0,31,300	1/1:5,24:29:72.21:830,72,0	0/0:16,0:16:45.02:0,45,412	1/1:2,22:24:63.19:727,63,0	1/1:1,17:18:45.09:504,45,0	0/0:11,0:11:30.02:0,30,275	0/0:14,0:14:42.02:0,42,384	0/0:15,0:15:41.99:0,42,375	1/1:0,16:16:42.12:485,42,0	1/1:3,13:16:36.10:407,36,0	1/1:2,11:13:30.09:346,30,0	1/1:1,7:8:21.06:242,21,0	1/1:6,14:20:42.12:485,42,0	1/1:2,18:20:51.08:560,51,0	1/1:1,12:13:30.09:346,30,0	0/0:14,0:14:36.01:0,36,329	0/0:24,0:24:66.01:0,66,600	0/0:11,0:11:33.02:0,33,302	1/1:1,7:8:21.06:240,21,0	1/1:2,21:23:60.18:692,60,0	1/1:2,22:24:54.16:623,54,0	./.
chr10	80780341	.	GCACA	G	453.41	PASS	AB=0.964;AC=8;AF=0.154;AN=52;BaseQRankSum=1.890;DP=650;FS=0.999;HRun=0;HaplotypeScore=207.3980;InbreedingCoeff=0.5721;MQ=54.93;MQ0=15;MQRankSum=-2.596;QD=4.36;ReadPosRankSum=1.948;VQSLOD=2.7668;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,17:35:12.03:152,12,0	0/0:16,0:16:5.92:0,6,92	./.	0/0:39,0:19:3.01:0,3,43	0/1:20,0:20:0:0,0,0	0/0:13,0:15:17.08:0,17,245	0/0:22,0:31:13.95:0,14,144	0/0:33,0:30:48.54:0,49,618	0/1:12,1:13:17.80:18,0,613	0/0:22,0:21:33.07:0,33,440	0/0:19,0:19:2.72:0,3,50	0/0:24,0:29:45.87:0,46,905	1/1:11,7:21:18.04:227,18,0	1/1:7,8:15:12.04:192,12,0	0/0:35,0:35:6.72:0,7,230	0/0:30,0:30:17.85:0,18,185	0/0:19,0:19:17.56:0,18,252	0/0:11,0:11:12.29:0,12,126	0/0:19,0:17:15.14:0,15,129	0/0:34,0:33:8.70:0,9,84	0/0:39,0:38:5.93:0,6,85	0/0:16,0:19:38.34:0,38,751	0/0:16,0:19:29.57:0,30,552	0/0:22,0:23:44.89:0,45,898	0/0:18,0:18:3.01:0,3,44	0/0:28,0:27:36.11:0,36,483	0/0:21,0:21:12.03:0,12,186	./.
chr10	80780348	.	C	CAT	2948.49	PASS	AB=0.962;AC=22;AF=0.393;AN=56;BaseQRankSum=10.059;DP=675;FS=0.369;HRun=0;HaplotypeScore=182.6916;InbreedingCoeff=0.1012;MQ=49.16;MQ0=24;MQRankSum=-7.168;QD=7.43;ReadPosRankSum=0.063;VQSLOD=3.3747;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:32.32:0,32,246	0/1:5,10:16:36.96:60,0,37	0/0:27,0:4:8.95:0,9,67	0/0:39,0:12:16.34:0,16,181	1/1:20,0:20:20.68:140,21,0	0/1:15,0:15:6.50:7,0,207	0/0:30,0:30:43.98:0,44,393	0/1:36,0:30:26.56:298,0,27	0/0:17,0:17:42.01:0,42,526	0/1:23,0:22:59.19:283,0,59	0/1:16,0:16:3.36:68,0,3	0/0:30,0:29:68.96:0,69,795	0/0:18,0:18:32.74:0,33,237	0/0:14,0:14:26.86:0,27,203	0/1:36,0:36:19.77:295,0,20	1/1:31,0:31:3.99:240,4,0	0/1:20,0:21:13.66:253,0,14	0/1:12,0:12:31.03:31,0,45	0/1:24,0:22:22.84:198,0,23	1/1:34,0:33:24.99:265,25,0	1/1:40,0:39:28.75:205,29,0	0/0:23,0:22:54.03:0,54,645	0/0:21,0:21:33.53:0,34,515	0/0:23,0:23:63.93:0,64,703	0/1:20,0:20:30.06:155,0,30	0/1:28,0:27:29.50:388,0,29	0/1:22,0:22:54.41:180,0,54	1/1:3,0:3:8.94:66,9,0
chr10	80781612	.	TA	T	1342.83	PASS	AB=0.984;AC=25;AF=0.446;AN=56;BaseQRankSum=13.841;DP=476;FS=5.525;HRun=1;HaplotypeScore=114.3877;InbreedingCoeff=0.4577;MQ=84.08;MQ0=0;MQRankSum=-3.897;QD=5.13;ReadPosRankSum=3.472;VQSLOD=0.7379;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.21:0,78,1130	1/1:5,0:5:12.35:46,12,0	0/0:21,0:20:57.18:0,57,872	0/0:16,0:16:36.93:0,37,463	1/1:13,2:15:31.72:177,32,0	0/0:13,0:13:39.13:0,39,615	0/0:23,0:23:69.24:0,69,1093	0/1:28,0:28:53.95:54,0,131	0/0:22,0:22:63.14:0,63,879	1/1:9,0:9:0.28:44,0,0	0/1:7,1:8:12.43:41,0,12	0/0:17,0:17:51.14:0,51,751	0/0:15,0:15:45.15:0,45,703	0/0:21,0:21:63.21:0,63,979	0/1:16,0:16:25.12:61,0,25	0/1:21,0:21:30.06:81,0,30	1/1:19,0:19:34:130,34,0	1/1:15,0:15:14.99:109,15,0	0/1:15,0:15:13.78:44,0,14	1/1:19,3:21:48.16:260,48,0	1/1:32,1:33:34.71:172,35,0	0/0:10,0:10:27.09:0,27,425	0/0:9,0:9:24.05:0,24,325	0/0:17,0:17:42.14:0,42,660	1/1:15,0:15:24.51:78,25,0	0/1:13,0:13:29.39:31,0,29	1/1:16,1:17:42.08:195,42,0	0/1:11,0:11:22.61:23,0,68
chr10	80781613	.	AC	A	6089.30	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=12.458;DP=479;FS=2.599;HRun=7;HaplotypeScore=99.1478;InbreedingCoeff=0.9832;MQ=84.12;MQ0=0;MQRankSum=-4.109;QD=23.42;ReadPosRankSum=1.985;VQSLOD=4.8612;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.17:0,84,945	1/1:0,5:5:15.03:153,15,0	0/0:21,0:20:57.14:0,57,662	0/0:16,0:16:20.67:0,21,368	1/1:3,13:16:36.07:364,36,0	0/0:15,0:15:42.11:0,42,503	0/0:24,0:24:72.20:0,72,880	1/1:7,20:27:57.10:570,57,0	0/0:22,0:22:60.17:0,60,731	1/1:1,8:9:24.05:245,24,0	1/1:5,3:8:9.49:92,9,0	0/0:17,0:17:45.14:0,45,566	0/0:16,0:16:45.13:0,45,553	0/0:21,0:21:63.20:0,63,792	1/1:3,13:16:33.07:337,33,0	1/1:2,18:20:13.37:452,13,0	1/1:0,19:19:51.11:520,51,0	1/1:1,14:15:42.10:428,42,0	1/1:2,13:15:39.07:392,39,0	1/1:3,19:21:54.12:549,54,0	1/1:3,28:31:72.16:734,72,0	0/0:10,0:10:30.08:0,30,360	0/0:9,0:9:21.02:0,21,222	0/0:17,0:17:48.12:0,48,566	1/1:2,13:15:33.07:337,33,0	1/1:4,10:14:27.05:275,27,0	1/1:1,16:17:48.11:487,48,0	1/1:6,5:11:15.03:153,15,0
chr10	80781830	.	CT	C	10271.96	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=12.211;DP=566;FS=0.000;HRun=5;HaplotypeScore=94.8015;InbreedingCoeff=0.9988;MQ=72.02;MQ0=0;MQRankSum=-2.177;QD=30.21;ReadPosRankSum=1.908;VQSLOD=5.0466;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1429	1/1:2,7:9:21.06:238,21,0	0/0:17,0:17:37.56:0,38,437	0/0:15,0:15:32.89:0,33,391	1/1:0,23:23:57.16:643,57,0	0/0:18,0:18:54.16:0,54,721	0/0:17,0:17:48.15:0,48,642	1/1:0,21:21:60.16:673,60,0	0/0:16,0:16:45.15:0,45,615	1/1:1,22:23:60.17:678,60,0	1/1:0,22:22:60.17:679,60,0	0/0:18,0:18:51.17:0,51,697	0/0:12,0:12:36.10:0,36,475	0/0:17,0:17:48.16:0,48,656	1/1:1,26:27:78.22:884,78,0	1/1:2,22:24:57.16:646,57,0	1/1:1,25:26:75.21:850,75,0	1/1:1,20:21:57.16:646,57,0	1/1:2,17:19:51.14:576,51,0	1/1:2,22:24:54.15:612,54,0	1/1:3,27:30:81.23:916,81,0	0/0:22,0:22:63.21:0,63,861	0/0:21,0:21:60.17:0,60,774	0/0:18,0:18:48.14:0,48,639	1/1:1,19:20:54.15:611,54,0	1/1:0,22:22:63.16:703,63,0	1/1:1,20:21:60.17:680,60,0	1/1:0,8:8:21.06:238,21,0
chr10	80782144	.	ACCATAAGAGGTCATT	A	17534.30	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=13.855;DP=430;FS=1.300;HRun=0;HaplotypeScore=262.9404;InbreedingCoeff=0.9558;MQ=74.53;MQ0=0;MQRankSum=-13.589;QD=85.53;ReadPosRankSum=3.612;VQSLOD=4.5148;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.14:0,51,3044	1/1:2,5:7:18.06:819,18,0	0/0:15,0:15:36.12:0,36,1645	0/0:11,0:11:12.95:0,13,720	1/1:4,12:16:33.11:1357,33,0	0/0:23,0:23:69.24:0,69,4309	0/0:21,0:21:60.21:0,60,4040	1/1:14,6:18:21.06:759,21,0	0/0:23,0:23:66.20:0,66,4381	1/1:10,11:21:42.14:1858,42,0	1/1:6,9:15:30.10:1365,30,0	0/0:24,0:24:72.25:0,72,4875	0/0:14,0:14:42.14:0,42,2697	0/0:22,0:22:66.23:0,66,4782	1/1:2,10:12:33.11:1373,33,0	1/1:3,9:12:30.09:1256,30,0	1/1:5,3:8:9.03:336,9,0	1/1:3,2:5:6.02:274,6,0	1/1:7,7:12:24.07:984,24,0	1/1:5,12:17:39.13:1776,39,0	1/1:4,2:6:6.02:273,6,0	0/0:18,0:18:51.18:0,51,3547	0/0:22,0:22:66.23:0,66,4702	0/0:15,0:15:42.14:0,42,3001	1/1:4,8:12:27.09:1143,27,0	1/1:5,14:19:42.14:1914,42,0	1/1:5,9:14:27.09:1227,27,0	1/1:0,7:7:18.06:821,18,0
chr10	80782145	.	CCATAAGAGGTCATT	C	12365.18	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=14.825;DP=366;FS=0.401;HRun=0;HaplotypeScore=247.2915;InbreedingCoeff=0.8863;MQ=79.68;MQ0=0;MQRankSum=-13.379;QD=80.29;ReadPosRankSum=3.415;VQSLOD=4.3710;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.14:0,48,2834	1/1:5,0:6:18.06:587,18,0	0/0:14,0:15:36.12:0,36,1517	0/1:11,0:11:16.11:16,0,595	1/1:12,0:12:33.11:931,33,0	0/0:23,0:23:69.21:0,69,4005	0/0:21,0:21:60.21:0,60,3814	1/1:9,0:8:17.55:498,18,0	0/0:22,0:22:60.21:0,60,4081	1/1:13,1:14:42.14:1319,42,0	1/1:9,1:10:30.10:978,30,0	0/0:24,0:24:72.25:0,72,4587	0/0:14,0:14:42.12:0,42,2509	0/0:22,0:22:66.23:0,66,4506	1/1:11,0:11:32.85:946,33,0	1/1:10,0:10:27.09:881,27,0	1/1:5,0:5:9.01:220,9,0	1/1:2,0:2:6.02:196,6,0	1/1:9,0:8:21.07:685,21,0	1/1:12,1:13:39.13:1278,39,0	1/1:2,0:2:6.02:196,6,0	0/0:17,0:17:51.18:0,51,3322	0/0:23,0:23:69.19:0,69,4446	0/0:14,0:14:42.14:0,42,2826	1/1:9,0:9:26.76:794,27,0	1/1:14,0:14:42.14:1371,42,0	1/1:9,1:9:27.09:883,27,0	1/1:7,0:7:18.06:587,18,0
chr10	80782170	.	A	AT	9345.91	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.751;DP=478;FS=4.847;HRun=2;HaplotypeScore=208.8311;InbreedingCoeff=0.9258;MQ=64.33;MQ0=1;MQRankSum=-6.432;QD=21.63;ReadPosRankSum=4.246;VQSLOD=4.7278;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,4:17:44.75:450,45,0	1/1:1,7:8:20.56:139,21,0	0/0:24,0:21:49.49:0,49,354	0/0:22,0:19:16.84:0,17,211	1/1:3,14:17:42.04:219,42,0	1/1:15,4:19:50.88:570,51,0	1/1:12,6:18:53.26:503,53,0	1/1:5,13:14:32.89:256,33,0	1/1:18,8:26:65.68:699,66,0	1/1:8,17:25:67.02:589,67,0	1/1:3,17:20:42.83:247,43,0	1/1:19,3:22:56.96:647,57,0	1/1:10,3:13:38.68:397,39,0	1/1:18,3:21:62.66:694,63,0	1/1:2,13:15:34.83:207,35,0	1/1:0,11:11:31.97:178,32,0	1/1:4,6:10:13.65:108,14,0	1/1:2,6:8:11.89:85,12,0	1/1:3,13:14:32.93:268,33,0	1/1:4,15:19:46.63:286,47,0	1/1:1,7:8:7.85:39,8,0	1/1:15,2:17:44.76:503,45,0	1/1:25,3:28:70.85:839,71,0	1/1:14,7:20:39.73:400,40,0	1/1:2,11:13:32.15:200,32,0	1/1:3,16:18:53.59:416,54,0	1/1:2,14:15:43.08:287,43,0	1/1:0,7:7:17.78:121,18,0
chr10	80782174	.	TG	T	9809.38	PASS	AB=0.903;AC=54;AF=0.964;AN=56;BaseQRankSum=1.081;DP=488;FS=2.537;HRun=2;HaplotypeScore=209.1273;InbreedingCoeff=0.0875;MQ=64.28;MQ0=1;MQRankSum=-6.173;QD=20.10;ReadPosRankSum=2.082;VQSLOD=4.8245;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,4:16:47.36:447,47,0	1/1:1,7:8:22.82:148,23,0	0/1:21,3:21:16.67:17,0,321	0/1:19,1:19:8.95:9,0,204	1/1:3,16:19:48.78:323,49,0	1/1:17,3:20:56.91:557,57,0	1/1:11,7:18:52.18:454,52,0	1/1:4,17:17:41.58:327,42,0	1/1:14,7:21:61.85:554,62,0	1/1:9,17:26:69.14:598,69,0	1/1:0,21:21:50.04:388,50,0	1/1:16,5:21:62.66:644,63,0	1/1:9,4:13:35.09:340,35,0	1/1:17,3:20:58.83:585,59,0	1/1:1,14:15:41.97:273,42,0	1/1:1,11:12:33.30:170,33,0	1/1:2,9:11:22.71:168,23,0	1/1:0,8:8:17.69:145,18,0	1/1:3,15:16:44.68:362,45,0	1/1:2,17:19:53.46:353,53,0	1/1:1,8:9:19.71:165,20,0	1/1:15,4:19:56.20:565,56,0	1/1:24,3:27:66.31:780,66,0	1/1:13,8:20:41.82:404,42,0	1/1:1,12:13:36.75:230,37,0	1/1:3,16:18:52.70:340,53,0	1/1:4,14:17:48.23:323,48,0	1/1:2,7:9:23.35:141,23,0
chr10	80782624	.	G	GAAAA	13921.05	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-9.573;DP=510;FS=0.000;HRun=7;HaplotypeScore=86.7766;InbreedingCoeff=0.9925;MQ=79.80;MQ0=0;MQRankSum=-7.213;QD=48.17;ReadPosRankSum=-1.680;VQSLOD=3.6599;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:57.12:0,57,844	1/1:1,9:13:27.09:585,27,0	0/0:28,0:28:70.21:0,70,948	0/0:21,0:20:30.85:0,31,525	1/1:5,22:30:60.08:1249,60,0	0/0:21,0:21:63.21:0,63,985	0/0:17,0:17:48.12:0,48,703	1/1:13,16:32:69.21:1395,69,0	0/0:10,0:10:30.09:0,30,447	1/1:6,19:25:57.18:1307,57,0	1/1:4,12:16:30.10:716,30,0	0/0:17,0:17:39.10:0,39,610	0/0:18,0:18:48.15:0,48,749	0/0:13,0:13:36.11:0,36,561	1/1:5,19:24:46.71:1067,47,0	1/1:1,8:10:18.06:401,18,0	1/1:4,13:17:36.12:890,36,0	1/1:4,6:11:24.08:551,24,0	1/1:4,10:16:36.11:769,36,0	1/1:3,19:23:60.20:1356,60,0	1/1:1,3:7:17.95:215,18,0	0/0:17,0:17:45.13:0,45,682	0/0:18,0:18:51.16:0,51,798	0/0:15,0:15:42.13:0,42,657	1/1:2,12:14:24.08:601,24,0	1/1:5,18:23:57.20:1339,57,0	1/1:2,18:22:48.16:1184,48,0	1/1:1,5:6:12.04:294,12,0
chr10	80782890	.	AC	A	1176.80	PASS	AB=0.900;AC=12;AF=0.214;AN=56;BaseQRankSum=2.223;DP=453;FS=19.662;HRun=1;HaplotypeScore=141.4887;InbreedingCoeff=0.5912;MQ=74.61;MQ0=0;MQRankSum=-2.917;QD=10.14;ReadPosRankSum=-2.643;VQSLOD=-0.1439;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,6:10:7.81:135,8,0	0/0:8,0:8:10.72:0,11,42	0/0:22,0:19:24.93:0,25,428	0/0:17,0:11:19.07:0,19,156	0/0:26,0:26:22.15:0,22,64	1/1:1,15:16:44.13:402,44,0	1/1:0,10:10:28.72:186,29,0	0/1:22,0:22:6.42:6,0,75	0/0:15,0:15:45.13:0,45,567	0/0:23,0:23:10.83:0,11,103	0/0:25,0:25:21.46:0,21,57	0/0:14,0:14:41.97:0,42,491	1/1:5,17:21:40.76:435,41,0	0/1:4,8:12:6.90:166,0,7	0/0:22,0:22:25.59:0,26,65	0/0:17,0:17:23.22:0,23,85	0/0:10,0:10:12.76:0,13,31	0/1:13,0:13:9.01:9,0,15	0/0:17,0:17:3.78:0,4,19	0/0:21,0:21:19.80:0,20,50	0/1:10,0:10:0.15:0,0,5	0/0:14,0:14:42.04:0,42,455	0/0:15,0:15:45.15:0,45,582	0/0:6,0:6:18.06:0,18,232	0/0:15,0:15:16.76:0,17,41	0/0:18,0:18:5.89:0,6,26	0/0:23,0:23:25.87:0,26,65	0/0:9,0:9:13.07:0,13,39
chr10	80782891	.	C	CT	13354.66	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=10.550;DP=453;FS=0.000;HRun=0;HaplotypeScore=98.6666;InbreedingCoeff=0.8747;MQ=74.88;MQ0=0;MQRankSum=-4.438;QD=36.39;ReadPosRankSum=1.261;VQSLOD=4.5880;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,2:10:24.04:260,24,0	1/1:0,8:9:14.77:223,15,0	0/0:22,0:19:49.01:0,49,552	0/1:16,0:11:9.28:9,0,110	1/1:0,26:27:69.23:1009,69,0	1/1:15,0:15:45.11:545,45,0	1/1:10,0:10:30.04:311,30,0	1/1:0,21:21:63.17:907,63,0	0/0:15,0:15:45.15:0,45,628	1/1:0,21:21:63.20:896,63,0	1/1:0,25:25:69.22:1003,69,0	0/0:14,0:14:41.97:0,42,558	1/1:21,1:21:63.09:744,63,0	1/1:10,2:12:35.99:415,36,0	1/1:0,22:22:60.20:893,60,0	1/1:1,14:16:3.24:589,3,0	1/1:0,10:10:27.09:406,27,0	1/1:0,14:14:39.07:541,39,0	1/1:0,17:17:48.16:716,48,0	1/1:0,21:21:54.18:802,54,0	1/1:1,10:11:21.07:317,21,0	0/0:14,0:14:42.13:0,42,568	0/0:15,0:15:45.15:0,45,629	0/0:6,0:6:18.06:0,18,251	1/1:0,15:15:36.12:544,36,0	1/1:0,19:19:57.18:833,57,0	1/1:0,23:23:66.22:994,66,0	1/1:0,9:9:27.09:395,27,0
chr10	80782892	.	A	ACTG	10668.71	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=11.006;DP=467;FS=0.434;HRun=0;HaplotypeScore=127.7964;InbreedingCoeff=0.8798;MQ=73.75;MQ0=0;MQRankSum=-3.060;QD=29.47;ReadPosRankSum=1.324;VQSLOD=5.2581;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,6:13:27.05:375,27,0	1/1:9,0:9:4.40:120,4,0	0/0:23,0:20:47.07:0,47,765	0/0:17,0:11:7.20:0,7,253	1/1:27,0:27:69:651,69,0	1/1:4,15:19:51.17:830,51,0	1/1:1,10:11:30.09:421,30,0	1/1:21,0:20:60.16:707,60,0	0/0:15,0:15:45.15:0,45,839	1/1:20,0:20:59.70:628,60,0	1/1:24,0:24:68.96:631,69,0	0/0:14,0:14:42.14:0,42,783	1/1:6,17:22:63.14:1026,63,0	1/1:5,8:13:36.08:523,36,0	1/1:22,0:22:60:570,60,0	0/1:18,0:18:7.90:400,0,8	1/1:10,0:10:26.98:236,27,0	1/1:14,0:14:38.92:367,39,0	1/1:18,0:18:51.12:597,51,0	1/1:19,0:19:53.87:508,54,0	1/1:11,0:11:20.99:204,21,0	0/0:14,0:14:42.14:0,42,776	0/0:16,0:16:45.15:0,45,839	0/0:6,0:6:18.06:0,18,336	1/1:15,0:15:36.04:338,36,0	1/1:20,0:20:57.14:646,57,0	1/1:25,0:25:68.03:651,68,0	1/1:9,0:9:26.93:238,27,0
chr10	80782896	.	GA	G	1425.31	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.625;DP=484;FS=2.216;HRun=8;HaplotypeScore=143.3051;InbreedingCoeff=0.9687;MQ=73.15;MQ0=0;MQRankSum=-4.757;QD=16.57;ReadPosRankSum=0.365;VQSLOD=2.2312;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:13:21.72:190,22,0	0/0:7,1:8:14.18:0,14,173	0/0:22,0:19:10.11:0,10,332	0/0:17,0:11:21.75:0,22,184	0/0:26,0:26:69.20:0,69,795	1/1:1,18:19:47.66:404,48,0	1/1:6,6:12:23.45:160,23,0	0/0:24,0:23:60.18:0,60,708	0/0:17,0:17:48.14:0,48,570	0/0:19,0:19:48.12:0,48,553	0/0:25,0:25:66.20:0,66,769	0/0:16,0:16:48.14:0,48,570	1/1:11,15:25:59.22:478,59,0	1/1:4,11:15:44.37:367,44,0	0/0:22,0:22:51.14:0,51,587	0/0:20,0:20:51.12:0,51,577	0/0:9,0:9:27.08:0,27,311	0/0:14,1:15:10.86:0,11,352	0/0:18,0:18:45.14:0,45,529	0/0:19,0:19:51.15:0,51,593	0/0:11,0:11:21.06:0,21,246	0/0:15,0:15:42.13:0,42,507	0/0:16,0:16:42.13:0,42,507	0/0:6,0:6:15.05:0,15,181	0/0:14,0:14:39.12:0,39,456	0/0:22,0:22:66.20:0,66,784	0/0:28,0:28:72.20:0,72,817	0/0:9,0:9:27.07:0,27,305
chr10	80783617	.	GT	G	53.90	PASS	AC=4;AF=0.105;AN=38;BaseQRankSum=1.974;DP=105;FS=4.971;HRun=3;HaplotypeScore=19.6452;InbreedingCoeff=0.5122;MQ=138.41;MQ0=0;MQRankSum=-1.664;QD=13.47;ReadPosRankSum=1.302;VQSLOD=2.3079;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:9.03:112,9,0	./.	0/0:18,0:18:51.13:0,51,695	0/0:10,0:10:30.10:0,30,410	./.	0/0:3,0:2:9.03:0,9,129	0/0:3,0:3:9.03:0,9,130	0/0:6,0:6:18.06:0,18,259	0/0:10,0:10:30.10:0,30,432	0/0:1,0:1:3.01:0,3,43	./.	0/0:9,0:9:27.09:0,27,389	1/1:0,1:1:3.01:37,3,0	./.	./.	./.	0/0:3,0:3:9.03:0,9,130	0/0:1,0:1:3.01:0,3,43	0/0:5,0:5:15.05:0,15,216	./.	0/0:11,0:11:33.11:0,33,474	0/0:8,0:8:21.07:0,21,302	0/0:6,0:6:18.06:0,18,259	0/0:5,0:5:12:0,12,146	./.	0/0:1,0:1:3.01:0,3,43	./.	0/0:1,0:1:3.01:0,3,43
chr10	80783788	.	CG	C	7618.16	PASS	AB=0.522;AC=31;AF=0.554;AN=56;BaseQRankSum=10.993;DP=414;FS=59.137;HRun=2;HaplotypeScore=71.3109;InbreedingCoeff=0.9141;MQ=109.51;MQ0=0;MQRankSum=-6.225;QD=39.47;ReadPosRankSum=1.065;VQSLOD=0.0058;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.13:0,45,694	1/1:0,5:5:15.05:210,15,0	0/0:39,0:39:99:0,117,1799	0/0:21,0:21:60.20:0,60,922	1/1:0,17:17:48.16:671,48,0	0/0:18,0:18:51.17:0,51,814	0/0:11,0:11:33.11:0,33,527	1/1:0,14:14:42.14:588,42,0	0/0:22,0:22:66.23:0,66,1054	1/1:0,11:11:33.07:440,33,0	1/1:0,8:8:18.06:251,18,0	0/0:19,0:19:57.19:0,57,911	0/0:5,0:5:15.05:0,15,239	0/0:10,0:10:30.10:0,30,462	1/1:0,10:10:30.10:420,30,0	0/1:1,11:12:11.79:425,0,12	1/1:0,6:6:12.04:168,12,0	1/1:0,11:11:30.10:419,30,0	1/1:0,14:14:42.14:587,42,0	1/1:0,18:18:54.18:755,54,0	1/1:0,15:15:39.13:545,39,0	0/0:24,0:24:70.79:0,71,1095	0/0:20,0:20:60.19:0,60,935	0/0:16,0:16:48.16:0,48,767	1/1:0,10:10:30.10:420,30,0	1/1:0,12:12:36.12:504,36,0	1/1:0,27:27:78.26:1091,78,0	1/1:0,3:3:9.03:126,9,0
chr10	80784107	.	A	AC	4177.02	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-5.197;DP=605;FS=0.000;HRun=1;HaplotypeScore=91.2278;InbreedingCoeff=0.9980;MQ=79.41;MQ0=0;MQRankSum=-1.523;QD=40.95;ReadPosRankSum=3.338;VQSLOD=3.9537;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:39.13:584,39,0	0/0:13,0:13:36.11:0,36,454	0/0:20,0:20:60.06:0,60,739	0/0:18,0:18:53.87:0,54,650	0/0:32,0:32:96.28:0,96,1217	1/1:0,24:24:63.21:944,63,0	1/1:1,12:13:36.12:536,36,0	0/0:33,0:33:99:0,99,1274	0/0:35,0:35:99:0,102,1324	0/0:25,0:25:75.24:0,75,962	0/0:26,0:26:78.25:0,78,1006	0/0:16,0:16:48.10:0,48,603	1/1:0,29:29:78.26:1169,78,0	1/1:1,22:23:63.21:944,63,0	0/0:22,0:22:66.21:0,66,857	0/0:23,0:23:66.21:0,66,857	0/0:15,0:15:45.11:0,45,553	0/0:13,0:13:39.13:0,39,506	0/0:31,0:31:90.28:0,90,1156	0/0:37,0:37:99:0,105,1299	0/0:20,0:20:54.17:0,54,689	0/0:20,0:20:57.19:0,57,740	0/0:25,0:25:75.24:0,75,961	0/0:7,0:7:21.07:0,21,272	0/0:21,0:21:63.17:0,63,789	0/0:15,0:15:45.15:0,45,582	0/0:29,0:29:87.25:0,87,1097	0/0:7,0:7:21.07:0,21,271
chr10	80784611	.	C	CT	9772.24	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-14.482;DP=523;FS=4.136;HRun=7;HaplotypeScore=60.1177;InbreedingCoeff=0.9964;MQ=89.15;MQ0=0;MQRankSum=-4.068;QD=29.88;ReadPosRankSum=0.151;VQSLOD=5.3458;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:36.06:0,36,348	1/1:2,14:16:42.13:506,42,0	0/0:17,0:17:32.47:0,32,289	0/0:27,0:27:18.48:0,18,432	1/1:2,24:26:63.19:761,63,0	0/0:22,0:22:63.10:0,63,608	0/0:12,0:12:30.04:0,30,290	1/1:5,26:31:81.22:963,81,0	0/0:11,0:11:33.05:0,33,319	1/1:6,18:24:28.15:596,28,0	1/1:1,22:23:60.18:725,60,0	0/0:18,0:18:54.09:0,54,522	0/0:14,0:14:39.06:0,39,377	0/0:14,0:14:42.07:0,42,406	1/1:2,19:21:22.18:551,22,0	1/1:0,18:18:48.15:580,48,0	1/1:1,19:20:54.17:652,54,0	1/1:2,7:9:21.06:254,21,0	1/1:5,15:20:42.13:507,42,0	1/1:4,22:26:37.14:699,37,0	1/1:0,8:8:21.06:254,21,0	0/0:19,0:19:57.09:0,57,550	0/0:17,0:17:45.07:0,45,434	0/0:11,0:11:30:0,30,280	1/1:2,19:21:54.17:652,54,0	1/1:1,28:29:87.19:1021,87,0	1/1:5,23:28:66.20:797,66,0	1/1:0,7:7:21.06:254,21,0
chr10	80787229	.	T	TAAA	288.94	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.064;DP=426;FS=0.000;HRun=11;HaplotypeScore=74.0382;InbreedingCoeff=0.8753;MQ=63.34;MQ0=3;MQRankSum=-1.976;QD=12.56;ReadPosRankSum=-0.180;VQSLOD=0.7169;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:58.96:0,59,804	0/0:2,0:2:6.02:0,6,70	0/0:17,0:7:11.95:0,12,123	0/0:12,0:9:17.29:0,17,143	0/0:16,0:17:35.95:0,36,401	1/1:2,7:9:12.01:190,12,0	1/1:4,7:13:17.02:213,17,0	0/0:26,0:28:61.17:0,61,636	0/0:10,0:10:27.02:0,27,303	0/0:17,0:17:32.96:0,33,372	0/0:15,0:15:30:0,30,340	0/0:13,0:13:33.06:0,33,385	0/0:12,0:11:27.08:0,27,315	0/0:14,0:14:27.04:0,27,314	0/0:14,0:15:39.02:0,39,438	0/0:8,0:7:18.05:0,18,210	0/0:31,0:31:75.16:0,75,862	0/0:12,0:13:22.58:0,23,275	0/0:14,0:14:29.90:0,30,331	0/0:20,0:20:42.10:0,42,485	0/0:10,0:10:18.01:0,18,210	0/0:14,0:16:29.86:0,30,314	0/0:10,0:12:11.99:0,12,153	0/0:21,0:21:30.03:0,30,347	0/0:19,0:19:36.04:0,36,420	0/0:16,0:16:38.94:0,39,438	0/0:8,0:10:23.86:0,24,246	0/0:7,0:7:15.02:0,15,167
chr10	80788070	.	G	GA	12347.94	PASS	AB=0.524;AC=31;AF=0.554;AN=56;BaseQRankSum=17.988;DP=669;FS=14.688;HRun=1;HaplotypeScore=151.8777;InbreedingCoeff=0.9303;MQ=79.34;MQ0=0;MQRankSum=-18.927;QD=37.65;ReadPosRankSum=0.937;VQSLOD=2.6193;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,1284	1/1:1,16:17:48.16:718,48,0	0/0:35,0:35:99:0,99,1187	0/0:35,0:34:86.66:0,87,1121	1/1:1,24:25:54.76:778,55,0	0/0:27,0:27:78.24:0,78,998	0/0:27,0:27:81.25:0,81,1036	1/1:1,35:36:99:1552,105,0	0/0:24,0:24:69.22:0,69,895	1/1:3,25:29:84.28:1237,84,0	1/1:0,18:18:47.29:630,47,0	0/0:28,0:28:75.23:0,75,959	0/0:30,0:30:87.28:0,87,1129	0/0:20,0:20:60.19:0,60,778	1/1:0,23:23:63.21:941,63,0	1/1:0,14:14:42.14:628,42,0	0/1:1,10:11:7.59:306,0,8	1/1:1,11:12:36.08:513,36,0	1/1:0,16:16:48.13:688,48,0	1/1:3,25:29:56.25:837,56,0	1/1:0,19:19:32.07:369,32,0	0/0:27,0:27:78.25:0,78,1012	0/0:30,0:30:84.27:0,84,1090	0/0:22,0:22:63.16:0,63,798	1/1:0,22:22:57.15:826,57,0	1/1:1,28:29:84.28:1256,84,0	1/1:1,23:24:63.21:941,63,0	1/1:0,4:4:9.03:127,9,0
chr10	80788074	.	A	AG	7478.98	PASS	AB=0.647;AC=31;AF=0.554;AN=56;BaseQRankSum=21.093;DP=653;FS=9.771;HRun=1;HaplotypeScore=175.9698;InbreedingCoeff=0.9240;MQ=73.63;MQ0=0;MQRankSum=-20.039;QD=23.15;ReadPosRankSum=-0.008;VQSLOD=3.5302;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:91.82:0,92,1258	1/1:3,14:17:47.96:416,48,0	0/0:26,0:26:75.21:0,75,937	0/0:38,0:36:87.86:0,88,1221	1/1:4,21:25:48.64:438,49,0	0/0:26,0:26:78.25:0,78,1012	0/0:30,0:30:90.29:0,90,1168	1/1:11,21:32:92.96:833,93,0	0/0:22,0:22:66.21:0,66,857	1/1:7,21:28:77.53:682,78,0	1/1:2,15:17:45.73:397,46,0	0/0:26,0:26:78.25:0,78,1009	0/0:29,0:29:87.28:0,87,1128	0/0:22,0:22:66.20:0,66,843	1/1:4,20:24:54.81:512,55,0	1/1:2,13:15:36.81:353,37,0	0/1:5,6:11:11.90:173,0,12	1/1:4,7:11:28.82:246,29,0	1/1:4,11:15:42.03:391,42,0	1/1:5,24:29:79.96:686,80,0	1/1:4,14:18:35.62:325,36,0	0/0:26,0:26:75.24:0,75,974	0/0:29,0:29:84.26:0,84,1075	0/0:21,0:21:63.20:0,63,818	1/1:3,22:25:71.96:630,72,0	1/1:3,25:28:75.05:694,75,0	1/1:3,21:24:66.04:603,66,0	1/1:3,1:4:9.02:98,9,0
chr10	80788076	.	T	TAG	12814.51	PASS	AB=0.684;AC=31;AF=0.554;AN=56;BaseQRankSum=20.909;DP=671;FS=10.260;HRun=0;HaplotypeScore=171.8511;InbreedingCoeff=0.9088;MQ=72.25;MQ0=0;MQRankSum=-20.365;QD=38.25;ReadPosRankSum=-0.000;VQSLOD=5.0670;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1652	1/1:2,14:16:48.16:678,48,0	0/0:28,0:28:81.24:0,81,1274	0/0:39,0:37:99:0,105,1605	1/1:6,21:27:60.18:818,60,0	0/0:27,0:27:78.27:0,78,1270	0/0:31,0:31:90.31:0,90,1466	1/1:7,21:28:46.60:1055,47,0	0/0:23,0:23:66.23:0,66,1075	1/1:5,21:26:75.25:1104,75,0	1/1:5,15:20:48.16:648,48,0	0/0:27,0:27:81.25:0,81,1289	0/0:30,0:30:90.29:0,90,1442	0/0:22,0:22:66.23:0,66,1072	1/1:4,20:24:69.23:982,69,0	1/1:2,13:15:42.14:578,42,0	0/1:7,6:13:15.76:391,0,16	1/1:4,7:11:10.04:343,10,0	1/1:6,11:17:32.46:724,32,0	1/1:9,24:33:81:1392,81,0	1/1:6,14:20:42.13:599,42,0	0/0:26,0:26:78.26:0,78,1250	0/0:28,0:28:84.27:0,84,1344	0/0:21,0:21:63.22:0,63,1028	1/1:7,22:29:75.25:1118,75,0	1/1:5,25:30:87.28:1250,87,0	1/1:3,21:24:72.24:1049,72,0	1/1:1,1:2:6.02:86,6,0
chr10	80789311	.	AT	A	574.35	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.114;DP=477;FS=2.750;HRun=8;HaplotypeScore=128.6970;InbreedingCoeff=0.9700;MQ=64.95;MQ0=0;MQRankSum=3.629;QD=17.95;ReadPosRankSum=0.356;VQSLOD=2.4251;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:84.12:0,84,993	0/0:11,0:11:33.09:0,33,387	0/0:12,0:11:14.91:0,15,151	0/0:7,1:8:11.98:0,12,128	0/0:26,0:26:66.16:0,66,780	1/1:1,17:18:48.08:464,48,0	1/1:3,11:14:24.04:232,24,0	0/0:21,0:21:51.15:0,51,608	0/0:18,0:18:51.14:0,51,605	0/0:34,0:34:87.23:0,87,1019	0/0:16,0:16:39.04:0,39,438	0/0:11,0:11:33.10:0,33,397	0/0:18,0:18:54.15:0,54,639	0/0:13,0:13:39.11:0,39,460	0/0:15,0:15:39.11:0,39,460	0/0:10,0:10:27.08:0,27,325	0/0:12,0:12:27.08:0,27,326	0/0:11,0:11:24.07:0,24,289	0/0:18,0:17:48.15:0,48,579	0/0:28,0:28:75.10:0,75,853	0/0:8,0:8:21.06:0,21,254	0/0:20,0:20:57.17:0,57,688	0/0:13,0:13:36.11:0,36,434	0/0:14,0:14:39.12:0,39,471	0/0:20,0:20:48.15:0,48,579	0/0:25,0:25:72.21:0,72,859	0/0:20,0:20:60.18:0,60,723	0/0:14,0:14:27.08:0,27,324
chr10	80789355	.	TTTAAAATACGACTTGCTGTGAGAATA	T	27075.21	PASS	AC=30;AF=0.556;AN=54;BaseQRankSum=14.763;DP=412;FS=2.439;HRun=0;HaplotypeScore=293.0881;InbreedingCoeff=0.9424;MQ=71.71;MQ0=0;MQRankSum=-11.363;QD=117.21;ReadPosRankSum=4.150;VQSLOD=4.1597;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.24:0,69,7011	1/1:2,8:10:21.07:1483,21,0	0/0:17,0:17:48.16:0,48,2777	0/0:3,0:3:3.01:0,3,198	1/1:6,20:25:48.08:2665,48,0	0/0:15,0:15:39.13:0,39,4510	0/0:10,0:10:27.09:0,27,2426	1/1:11,6:17:18.03:742,18,0	0/0:18,0:18:54.17:0,54,4674	1/1:4,17:21:48.15:3202,48,0	1/1:2,19:21:48.08:3006,48,0	0/0:13,0:13:39.13:0,39,4437	0/0:20,0:20:57.19:0,57,6393	0/0:15,0:15:45.15:0,45,4787	1/1:3,9:12:21.07:1483,21,0	1/1:0,8:8:21.07:1483,21,0	1/1:5,6:11:9.03:636,9,0	1/1:0,5:5:6.02:424,6,0	1/1:10,7:16:18.02:734,18,0	1/1:10,16:26:45.11:2986,45,0	./.	0/0:16,0:16:45.15:0,45,4479	0/0:13,0:13:33.11:0,33,3457	0/0:15,0:15:45.15:0,45,4689	1/1:0,14:14:39.13:2754,39,0	1/1:3,18:21:54.17:3146,54,0	1/1:9,6:15:12.04:848,12,0	1/1:0,7:7:21.07:1483,21,0
chr10	80789694	.	TC	T	9574.64	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=8.901;DP=471;FS=11.640;HRun=2;HaplotypeScore=60.2060;InbreedingCoeff=0.9980;MQ=80.44;MQ0=5;MQRankSum=-4.140;QD=32.35;ReadPosRankSum=0.460;VQSLOD=3.5957;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:60.19:774,60,0	1/1:0,9:9:24.08:307,24,0	0/0:26,0:23:62.85:0,63,898	0/0:31,0:21:59.39:0,59,825	1/1:1,27:26:54.17:682,54,0	0/0:17,0:16:45.15:0,45,666	0/0:28,0:28:84.28:0,84,1255	1/1:2,23:25:69.22:894,69,0	0/0:10,0:10:27.09:0,27,393	1/1:0,19:19:51.05:662,51,0	1/1:0,19:19:45.14:555,45,0	0/0:10,0:10:30.10:0,30,450	1/1:0,14:14:33.11:428,33,0	1/1:0,9:9:24.08:311,24,0	1/1:0,10:10:24.08:312,24,0	1/1:0,14:14:36.12:467,36,0	1/1:0,11:11:30.10:389,30,0	1/1:0,10:10:27.09:350,27,0	1/1:0,9:9:27.03:317,27,0	1/1:0,18:18:51.16:632,51,0	1/1:1,13:14:30.10:390,30,0	0/0:21,0:21:63.21:0,63,936	0/0:13,0:13:36.09:0,36,486	0/0:19,0:19:57.19:0,57,843	1/1:0,17:17:39.12:483,39,0	1/1:0,21:21:63.20:818,63,0	1/1:1,13:14:36.11:454,36,0	1/1:0,9:9:27.09:350,27,0
chr10	80789830	.	AGTGT	A	339.15	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=-1.012;DP=523;FS=11.021;HRun=0;HaplotypeScore=94.6337;InbreedingCoeff=0.3093;MQ=54.98;MQ0=37;MQRankSum=0.696;QD=1.60;ReadPosRankSum=0.535;VQSLOD=1.0289;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,4:27:12.02:152,12,0	1/1:4,0:4:0.47:1,0,0	0/0:43,0:9:8.65:0,9,50	0/0:40,0:11:8.17:0,8,69	0/0:10,0:10:3:0,3,25	0/1:19,0:17:34.73:49,0,35	0/1:24,0:21:76.01:115,0,76	0/0:20,0:19:5.81:0,6,31	0/0:19,0:17:16.30:0,16,289	0/0:19,0:17:2.62:0,3,7	0/0:7,0:11:3:0,3,25	0/0:8,0:7:0.47:0,0,1	1/1:6,11:17:8.53:95,9,0	1/1:2,15:17:3.01:44,3,0	0/1:22,0:21:0.06:0,0,0	0/0:23,0:22:1.83:0,2,4	1/1:13,0:12:1.46:6,1,0	0/0:7,0:4:2.58:0,3,20	0/0:20,0:19:6.20:0,6,65	0/0:7,0:7:1.41:0,1,3	0/1:41,0:37:0.56:1,0,2	0/0:14,0:11:9.01:0,9,100	0/0:5,0:5:1.36:0,1,4	0/0:31,0:30:32.97:0,33,370	0/0:17,0:16:1.82:0,2,4	0/1:16,0:16:1.63:2,0,46	0/0:16,0:16:3.25:0,3,7	0/1:9,0:8:0.17:0,0,0
chr10	80789854	.	TGC	T	3680.80	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=-3.726;DP=447;FS=4.347;HRun=0;HaplotypeScore=57.4909;InbreedingCoeff=0.2761;MQ=46.25;MQ0=64;MQRankSum=0.425;QD=8.44;ReadPosRankSum=1.043;VQSLOD=2.8805;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,17:30:11.64:79,12,0	1/1:2,0:2:3:25,3,0	1/1:27,0:3:6.11:18,6,0	0/1:25,0:5:3.59:4,0,13	1/1:7,0:6:11.98:97,12,0	1/1:20,0:18:19.10:94,19,0	1/1:33,0:24:45.14:255,45,0	1/1:8,0:6:14.82:105,15,0	0/1:18,0:15:35.48:35,0,116	1/1:13,0:11:32.74:283,33,0	0/1:4,0:4:0:0,0,0	1/1:8,0:6:11.93:91,12,0	1/1:20,0:18:14.09:98,14,0	1/1:24,0:22:5.63:42,6,0	1/1:17,0:15:32.09:336,32,0	1/1:12,0:11:23.96:196,24,0	1/1:10,0:8:13.88:87,14,0	1/1:9,0:4:8.93:66,9,0	1/1:4,7:8:20.89:164,21,0	1/1:5,0:5:11.95:92,12,0	1/1:35,0:30:49.92:393,50,0	0/0:8,3:6:5.19:0,5,27	1/1:7,0:6:5.98:46,6,0	0/1:37,0:33:44.19:153,0,44	1/1:12,0:11:23.96:197,24,0	1/1:14,0:12:35.92:306,36,0	1/1:13,0:13:38.87:309,39,0	1/1:8,0:5:14.90:110,15,0
chr10	80791284	.	C	CACCAA	29298.96	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-13.117;DP=572;FS=18.015;HRun=0;HaplotypeScore=88.2604;InbreedingCoeff=0.9822;MQ=87.86;MQ0=1;MQRankSum=-9.909;QD=78.55;ReadPosRankSum=2.426;VQSLOD=5.6398;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:31:60.21:1928,60,0	1/1:1,10:12:33.11:1050,33,0	0/0:23,0:23:63.20:0,63,1298	0/0:26,0:26:75.22:0,75,1551	1/1:4,18:23:63.64:1836,64,0	0/0:32,0:32:96.33:0,96,2124	0/0:20,0:20:60.21:0,60,1305	1/1:2,29:34:99:3012,99,0	0/0:19,0:19:57.20:0,57,1271	1/1:2,22:26:75.26:2280,75,0	1/1:2,17:20:48.12:1466,48,0	0/0:16,0:16:45.15:0,45,999	1/1:2,12:14:42.14:1353,42,0	1/1:1,8:11:26.66:853,27,0	1/1:2,20:24:69.15:2143,69,0	1/1:3,14:17:42.14:1353,42,0	1/1:0,13:15:33.11:1066,33,0	1/1:2,7:12:18.06:566,18,0	1/1:2,11:17:45.13:1289,45,0	1/1:3,18:22:60.16:1816,60,0	1/1:3,15:21:45.15:1396,45,0	0/0:18,0:18:54.19:0,54,1169	0/0:23,0:23:66.21:0,66,1429	0/0:22,0:22:66.23:0,66,1417	1/1:0,24:26:66.23:2131,66,0	1/1:3,20:25:69.18:2020,69,0	1/1:2,15:19:48.16:1548,48,0	1/1:0,3:3:6.02:194,6,0
chr10	80791783	.	G	GA	556.06	PASS	AB=1.000;AC=39;AF=0.722;AN=54;BaseQRankSum=0.710;DP=232;FS=0.000;HRun=1;HaplotypeScore=66.8441;InbreedingCoeff=0.3043;MQ=62.81;MQ0=11;MQRankSum=-0.769;QD=3.56;ReadPosRankSum=0.733;VQSLOD=-0.0492;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:7:3.06:3,0,3	1/1:4,0:4:0.52:35,1,0	0/0:25,0:8:8:0,8,106	0/0:24,0:12:12.16:0,12,69	1/1:10,0:9:0.47:1,0,0	1/1:11,1:11:10.10:91,10,0	1/1:8,2:8:4.35:63,4,0	1/1:9,0:6:2.09:8,2,0	0/0:4,0:3:2.97:0,3,20	1/1:9,0:9:16.45:129,16,0	./.	1/1:6,0:5:1.36:2,1,0	1/1:7,0:7:0.47:1,0,0	1/1:5,0:5:2.99:25,3,0	1/1:8,0:8:0.40:1,0,0	1/1:6,1:7:3.37:18,3,0	1/1:7,0:7:4.70:27,5,0	0/0:6,0:5:0.21:0,0,1	0/1:7,0:6:5.41:29,0,5	1/1:7,0:7:0.06:20,0,0	1/1:7,0:6:5.95:44,6,0	0/1:6,0:6:18.31:18,0,21	0/0:7,0:4:3:0,3,26	0/0:5,0:4:2.62:0,3,25	1/1:7,0:6:1.05:3,1,0	1/1:10,0:8:3.75:32,4,0	1/1:9,0:9:11.13:89,11,0	1/1:2,0:2:5.99:48,6,0
chr10	80794638	.	AT	A	675.04	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.323;DP=505;FS=6.229;HRun=7;HaplotypeScore=47.3383;InbreedingCoeff=0.8828;MQ=62.12;MQ0=5;MQRankSum=1.829;QD=19.85;ReadPosRankSum=2.338;VQSLOD=3.0175;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:52.82:0,53,700	0/0:7,0:7:21.07:0,21,264	0/0:11,0:5:6.02:0,6,75	0/0:8,0:6:6.02:0,6,76	0/0:28,0:28:78.25:0,78,981	1/1:2,21:23:54.12:551,54,0	1/1:3,8:11:24.05:245,24,0	0/0:33,0:31:75.24:0,75,943	0/0:20,0:20:60.19:0,60,755	0/0:24,0:24:72.23:0,72,906	0/0:16,0:16:42.13:0,42,528	0/0:12,0:12:30.10:0,30,377	0/0:18,0:17:42.13:0,42,528	0/0:14,0:14:42.12:0,42,515	0/0:19,0:19:54.13:0,54,661	0/0:13,0:13:33.11:0,33,414	0/0:19,0:17:45.14:0,45,565	0/0:26,0:26:72.23:0,72,905	0/0:22,0:22:54.16:0,54,667	0/0:18,0:18:39.12:0,39,491	0/0:9,0:9:27.09:0,27,339	0/0:9,0:9:21.07:0,21,264	0/0:16,0:16:42.07:0,42,484	0/0:16,0:16:42.08:0,42,496	0/0:28,0:27:75.22:0,75,921	0/0:30,0:31:65.69:0,66,849	0/0:23,0:23:63.17:0,63,774	0/0:6,0:6:12.04:0,12,148
chr10	80795012	.	AACACACACACACACAC	A	6862.67	PASS	AB=0.824;AC=25;AF=0.481;AN=52;BaseQRankSum=4.693;DP=373;FS=5.426;HRun=0;HaplotypeScore=157.9743;InbreedingCoeff=0.7352;MQ=66.81;MQ0=6;MQRankSum=-4.861;QD=38.34;ReadPosRankSum=3.141;VQSLOD=3.7767;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:20:18.06:0,18,481	1/1:2,3:5:6.02:264,6,0	0/0:22,0:14:12.04:0,12,310	0/0:18,0:13:15.05:0,15,479	1/1:10,3:13:2.99:24,3,0	0/0:15,0:16:15.05:0,15,683	0/0:19,0:19:27.09:0,27,1520	1/1:24,0:24:5.79:126,6,0	0/0:6,0:7:9.03:0,9,492	1/1:6,5:11:21.07:779,21,0	1/1:3,16:18:39.05:1480,39,0	0/0:8,0:11:10.28:0,10,599	0/0:4,0:5:8.52:0,9,244	0/0:6,0:15:21.07:0,21,616	1/1:8,5:13:15.05:662,15,0	1/1:3,3:6:6.02:265,6,0	0/1:11,3:13:35.90:126,0,36	0/0:4,0:4:2.22:0,2,7	1/1:7,8:15:21.03:627,21,0	1/1:5,5:10:12.01:415,12,0	./.	0/0:7,0:7:3.01:0,3,229	0/0:6,0:6:9.03:0,9,391	0/0:24,0:26:42.12:0,42,2733	1/1:9,3:13:9.03:373,9,0	1/1:6,11:17:35.51:1078,36,0	1/1:9,7:16:14.02:641,14,0	./.
chr10	80795546	.	AAT	A	3843.59	PASS	AB=1.000;AC=37;AF=0.712;AN=52;BaseQRankSum=2.821;DP=188;FS=0.999;HRun=0;HaplotypeScore=40.7489;InbreedingCoeff=0.6631;MQ=71.28;MQ0=0;MQRankSum=-0.578;QD=25.45;ReadPosRankSum=1.078;VQSLOD=3.6662;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,3:4:3.01:38,3,0	1/1:2,1:3:9.03:112,9,0	./.	0/1:8,0:3:1.31:1,0,36	1/1:2,3:5:9.03:113,9,0	0/0:6,0:6:6:0,6,53	0/0:4,0:4:2.99:0,3,23	1/1:6,37:43:99:1197,102,0	0/0:3,0:3:6:0,6,73	1/1:5,4:9:21.07:262,21,0	1/1:3,1:4:6.02:75,6,0	0/0:2,0:2:6.01:0,6,59	1/1:0,2:2:6.02:75,6,0	1/1:3,2:5:15.05:187,15,0	1/1:0,1:1:3.01:38,3,0	1/1:2,2:4:9.02:100,9,0	1/1:8,5:13:21.07:261,21,0	1/1:1,3:4:8.99:95,9,0	1/1:7,4:11:23.98:268,24,0	1/1:1,2:3:6.02:75,6,0	./.	0/0:3,0:3:9.03:0,9,145	0/0:2,0:2:6.02:0,6,96	0/0:6,0:6:12.04:0,12,187	1/1:0,4:4:12.04:150,12,0	1/1:6,4:10:27.02:312,27,0	1/1:5,3:8:18.06:224,18,0	1/1:2,8:10:21.07:263,21,0
chr10	80795564	.	T	TAC	192.66	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=-0.988;DP=197;FS=17.190;HRun=0;HaplotypeScore=69.4714;InbreedingCoeff=0.4469;MQ=48.42;MQ0=1;MQRankSum=0.521;QD=14.82;ReadPosRankSum=-1.221;VQSLOD=1.8576;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:2.81:0,3,45	0/0:2,0:2:6.01:0,6,70	./.	0/0:12,0:2:0.47:0,0,1	0/0:5,0:5:9.03:0,9,142	1/1:6,3:9:23.47:228,23,0	1/1:3,1:4:5.85:71,6,0	0/0:43,0:42:99:0,108,1464	0/0:1,0:1:3.01:0,3,46	0/0:9,0:9:24.08:0,24,346	0/0:3,0:3:3.01:0,3,46	0/0:3,0:3:8.99:0,9,109	0/0:2,0:2:6.02:0,6,90	0/0:5,0:5:14.77:0,15,173	0/0:2,0:2:3.01:0,3,46	0/0:4,0:4:6.02:0,6,92	0/0:12,0:12:27.03:0,27,334	0/0:4,0:4:9.03:0,9,131	0/0:9,0:9:27.08:0,27,394	0/0:4,0:4:6.01:0,6,71	./.	0/0:2,0:2:6.02:0,6,92	0/0:2,0:2:6.01:0,6,71	0/0:3,0:3:6.02:0,6,92	0/0:11,0:11:12.04:0,12,182	0/0:12,0:10:29.93:0,30,353	0/0:10,0:10:26.99:0,27,351	0/0:11,0:11:27.09:0,27,399
chr10	80795588	.	TACAC	T	2798.26	PASS	AC=28;AF=0.609;AN=46;BaseQRankSum=3.243;DP=249;FS=26.553;HRun=0;HaplotypeScore=82.2901;InbreedingCoeff=0.7577;MQ=50.39;MQ0=3;MQRankSum=-3.895;QD=18.29;ReadPosRankSum=1.490;VQSLOD=1.5171;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:10:0.02:0,0,0	1/1:0,1:1:3.01:51,3,0	0/0:10,0:5:15.05:0,15,286	0/0:16,0:4:4.52:0,5,85	1/1:3,6:9:9.03:138,9,0	0/0:1,0:9:16.95:0,17,82	0/0:2,0:7:14.18:0,14,74	1/1:27,7:33:66.09:919,66,0	0/0:3,0:3:6.02:0,6,127	1/1:2,8:10:27:369,27,0	./.	0/0:5,0:5:15.05:0,15,347	1/1:0,0:4:3:28,3,0	1/1:0,0:4:6.01:56,6,0	./.	./.	1/1:6,10:16:11.99:169,12,0	1/1:1,2:3:6.02:102,6,0	1/1:5,4:9:12.04:198,12,0	./.	./.	0/0:4,0:5:14.84:0,15,277	0/0:6,0:5:15.03:0,15,297	0/0:6,0:6:12.02:0,12,242	1/1:1,12:13:3.01:51,3,0	1/1:4,9:11:21.02:311,21,0	1/1:1,14:15:24.06:379,24,0	1/1:5,6:12:12.04:203,12,0
chr10	80797413	.	GTAGA	G	14000.89	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=12.233;DP=597;FS=0.784;HRun=0;HaplotypeScore=119.6182;InbreedingCoeff=0.9495;MQ=63.95;MQ0=1;MQRankSum=0.655;QD=32.11;ReadPosRankSum=4.096;VQSLOD=4.8129;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,7:13:15.05:259,15,0	1/1:1,6:7:18.06:311,18,0	0/0:9,0:8:19.42:0,19,314	0/0:7,0:8:12.31:0,12,221	1/1:4,34:38:66.23:1140,66,0	0/0:26,0:26:63.19:0,63,1518	0/0:16,0:16:39.12:0,39,935	1/1:12,29:41:87.17:1264,87,0	0/0:19,0:19:51.16:0,51,1202	1/1:5,35:39:99:1713,105,0	1/1:2,26:28:48.16:829,48,0	0/0:23,0:23:57.18:0,57,1371	1/1:2,12:14:17.89:311,18,0	1/1:3,15:18:27.09:467,27,0	1/1:5,23:28:36.12:622,36,0	1/1:2,13:15:30.10:518,30,0	1/1:3,13:16:33.11:570,33,0	1/1:6,5:11:1.34:228,1,0	1/1:8,22:30:66.22:1119,66,0	1/1:2,37:39:78.27:1348,78,0	1/1:1,15:16:21.07:363,21,0	0/0:21,0:21:54.19:0,54,1334	0/0:27,0:27:75.21:0,75,1666	0/0:11,0:11:27.08:0,27,612	1/1:1,20:21:30.10:518,30,0	1/1:1,27:28:81.28:1385,81,0	1/1:5,22:26:48.16:829,48,0	1/1:2,4:6:12.04:207,12,0
chr10	80797534	.	AT	A	14240.67	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=12.637;DP=577;FS=0.000;HRun=1;HaplotypeScore=55.2184;InbreedingCoeff=0.9972;MQ=79.98;MQ0=1;MQRankSum=0.026;QD=39.34;ReadPosRankSum=1.213;VQSLOD=5.2363;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:36.57:0,37,546	1/1:0,6:6:15.05:210,15,0	0/0:16,0:16:48.15:0,48,743	0/0:12,0:12:30.07:0,30,453	1/1:0,35:35:99:1402,105,0	0/0:20,0:20:60.20:0,60,952	0/0:11,0:11:33.10:0,33,504	1/1:0,44:44:99:1810,132,0	0/0:22,0:22:66.21:0,66,1028	1/1:0,26:26:78.23:1069,78,0	1/1:0,36:36:99:1422,108,0	0/0:22,0:22:66.21:0,66,1032	0/0:15,0:15:45.15:0,45,717	0/0:23,0:23:69.24:0,69,1103	1/1:0,21:21:57.19:797,57,0	1/1:0,18:18:54.18:755,54,0	1/1:0,15:15:45.12:607,45,0	1/1:0,9:9:24.08:335,24,0	1/1:0,25:24:72.24:1004,72,0	1/1:0,27:27:78.14:1026,78,0	1/1:0,12:12:27.09:378,27,0	0/0:12,0:12:36.12:0,36,570	0/0:36,0:36:99:0,108,1726	0/0:13,0:13:39.13:0,39,623	1/1:0,21:21:51.17:713,51,0	1/1:0,27:27:81.26:1117,81,0	1/1:0,28:28:78.26:1091,78,0	1/1:0,12:12:36.12:503,36,0
chr10	80797703	.	GA	G	1016.92	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.402;DP=574;FS=1.284;HRun=8;HaplotypeScore=53.7055;InbreedingCoeff=0.9275;MQ=81.83;MQ0=0;MQRankSum=-0.835;QD=22.60;ReadPosRankSum=1.027;VQSLOD=3.9384;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,7:8:21.03:203,21,0	0/0:8,0:8:24.07:0,24,290	0/0:20,0:20:39.10:0,39,454	0/0:16,0:16:32.59:0,33,370	0/0:36,0:37:99:0,105,1208	0/0:24,0:23:63.10:0,63,732	0/0:14,0:14:42.13:0,42,507	0/0:30,0:30:81.24:0,81,969	0/0:28,0:28:84.24:0,84,1002	0/0:26,0:26:72.22:0,72,869	0/0:29,0:29:75.22:0,75,886	0/0:16,0:16:42.05:0,42,477	1/1:2,16:18:45.07:434,45,0	1/1:0,19:19:54.09:522,54,0	0/0:23,0:23:69.20:0,69,823	0/0:15,0:15:42.13:0,42,507	0/0:9,0:9:27.01:0,27,294	0/0:4,0:4:11.77:0,12,121	0/0:20,0:19:51.15:0,51,607	0/0:38,0:38:99:0,105,1257	0/0:15,0:15:39.12:0,39,471	0/0:26,0:26:69.21:0,69,834	0/0:21,0:21:63.19:0,63,751	0/0:14,0:14:42.13:0,42,507	0/0:25,0:25:69.20:0,69,824	0/0:28,0:28:78.23:0,78,933	0/0:42,0:42:99:0,117,1388	0/0:1,0:1:3.01:0,3,36
chr10	80799596	.	A	AT	1267.64	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.650;DP=549;FS=2.019;HRun=7;HaplotypeScore=50.7870;InbreedingCoeff=0.9683;MQ=80.15;MQ0=0;MQRankSum=0.227;QD=26.97;ReadPosRankSum=0.209;VQSLOD=4.1831;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:57.17:689,57,0	0/0:9,0:9:27.04:0,27,261	0/0:13,0:13:13.64:0,14,160	0/0:14,0:14:8.97:0,9,149	0/0:25,0:25:69.11:0,69,666	0/0:19,0:19:54.09:0,54,521	0/0:20,0:20:51.06:0,51,486	0/0:39,0:39:99:0,111,1058	0/0:20,0:20:54.08:0,54,521	0/0:27,0:27:69.11:0,69,666	0/0:29,0:29:72.11:0,72,695	0/0:8,0:8:21.03:0,21,203	1/1:1,9:10:27.08:326,27,0	1/1:1,11:12:33.10:396,33,0	0/0:14,0:14:42.07:0,42,406	0/0:23,0:23:66.10:0,66,637	0/0:12,0:11:33:0,33,309	0/0:13,0:13:36.05:0,36,348	0/0:12,0:12:26.99:0,27,247	0/0:28,0:28:75.11:0,75,719	0/0:10,0:10:24.02:0,24,225	0/0:24,0:24:69.09:0,69,655	0/0:26,0:26:69.10:0,69,666	0/0:14,0:14:36.04:0,36,341	0/0:30,0:30:87.13:0,87,835	0/0:27,0:27:78.10:0,78,744	0/0:35,0:35:87.13:0,87,840	0/0:11,0:11:30.05:0,30,290
chr10	80802794	.	C	CTTT	1501.89	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.370;DP=536;FS=2.155;HRun=5;HaplotypeScore=127.1475;InbreedingCoeff=0.9784;MQ=80.09;MQ0=0;MQRankSum=-4.976;QD=33.38;ReadPosRankSum=-1.869;VQSLOD=1.0246;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,8:17:35.55:652,36,0	0/0:13,0:13:39.03:0,39,572	0/0:16,0:16:41.31:0,41,546	0/0:16,0:16:13.99:0,14,457	0/0:28,0:28:81.26:0,81,1237	0/0:25,0:25:75.25:0,75,1149	0/0:14,0:14:42.13:0,42,664	0/0:26,0:26:78.20:0,78,1122	0/0:19,0:19:54.18:0,54,923	0/0:29,0:29:84.28:0,84,1350	0/0:19,0:19:54.10:0,54,843	0/0:16,0:16:48.16:0,48,842	1/1:4,7:14:25.27:536,25,0	1/1:9,4:14:32.99:456,33,0	0/0:20,0:20:57.16:0,57,842	0/0:20,0:20:57.18:0,57,893	0/0:22,0:22:63.08:0,63,949	0/0:12,0:12:33.11:0,33,518	0/0:26,0:26:75.21:0,75,1152	0/0:30,0:30:81.27:0,81,1299	0/0:8,0:8:18.06:0,18,293	0/0:25,0:25:72.19:0,72,1155	0/0:12,0:12:36.04:0,36,571	0/0:16,0:16:45.14:0,45,743	0/0:29,0:29:87.29:0,87,1355	0/0:25,0:25:75.21:0,75,1214	0/0:21,0:20:54.18:0,54,870	0/0:4,0:4:12.01:0,12,169
chr10	80802796	.	GT	G	9262.27	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=4.486;DP=529;FS=5.170;HRun=8;HaplotypeScore=76.8762;InbreedingCoeff=0.9930;MQ=78.16;MQ0=0;MQRankSum=-2.195;QD=25.17;ReadPosRankSum=2.426;VQSLOD=5.7791;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:31.60:0,32,168	1/1:1,12:13:36.06:348,36,0	0/0:14,0:14:28.63:0,29,319	0/0:15,0:15:35.16:0,35,363	1/1:1,26:27:78.13:753,78,0	1/1:2,23:25:69.11:666,69,0	1/1:1,12:13:36.06:348,36,0	1/1:3,23:26:69.08:655,69,0	0/0:18,0:18:54.15:0,54,640	1/1:5,24:29:72.10:691,72,0	1/1:2,17:19:48.07:464,48,0	0/0:16,0:16:45.14:0,45,543	0/0:14,0:14:35.87:0,36,193	0/0:14,0:14:26.12:0,26,151	1/1:2,18:20:54.09:521,54,0	1/1:2,17:19:17.84:457,18,0	1/1:2,20:22:54.08:522,54,0	1/1:1,11:12:30.04:290,30,0	1/1:4,21:25:66.10:637,66,0	1/1:2,26:28:72.11:695,72,0	1/1:1,7:8:21.03:202,21,0	0/0:25,0:25:60.18:0,60,725	0/0:12,0:12:33.10:0,33,399	0/0:16,0:16:39.12:0,39,471	1/1:4,26:30:81.10:775,81,0	1/1:7,19:26:63.07:601,63,0	1/1:2,20:22:54.08:521,54,0	1/1:0,4:4:12.02:116,12,0
chr10	80802853	.	C	CT	10220.26	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-1.340;DP=540;FS=0.873;HRun=8;HaplotypeScore=90.3346;InbreedingCoeff=0.9828;MQ=68.21;MQ0=1;MQRankSum=-4.515;QD=24.93;ReadPosRankSum=0.715;VQSLOD=5.2189;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:11.40:37,11,0	1/1:2,8:10:27.08:311,27,0	0/0:25,0:20:21.27:0,21,248	0/0:14,0:11:14.97:0,15,130	1/1:4,25:29:78.23:896,78,0	1/1:11,1:26:42.90:229,43,0	1/1:7,0:15:29.93:163,30,0	1/1:4,25:29:72.18:816,72,0	0/0:19,0:19:51.02:0,51,467	1/1:3,20:23:66.17:736,66,0	1/1:3,14:17:45.13:511,45,0	0/0:12,0:12:23.99:0,24,220	1/1:13,0:13:29.30:132,29,0	1/1:14,0:14:25.90:152,26,0	1/1:2,25:27:69.20:793,69,0	1/1:1,16:17:45.13:519,45,0	1/1:7,14:21:45.13:517,45,0	1/1:4,6:11:23.83:236,24,0	1/1:2,24:26:72.20:818,72,0	1/1:9,15:24:26.69:560,27,0	1/1:2,17:19:48.13:544,48,0	0/0:22,0:22:53.99:0,54,485	0/0:20,0:20:57.02:0,57,517	0/0:18,0:18:48.02:0,48,439	1/1:3,19:22:60.14:677,60,0	1/1:6,23:29:78.22:892,78,0	1/1:4,14:18:48.13:543,48,0	1/1:2,3:5:12.04:138,12,0
chr10	80802858	.	T	TGTTTGTTTG	3616.50	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=3.201;DP=553;FS=1.265;HRun=0;HaplotypeScore=197.6864;InbreedingCoeff=0.2280;MQ=64.53;MQ0=1;MQRankSum=-8.657;QD=17.30;ReadPosRankSum=-3.694;VQSLOD=2.4472;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:18:20.99:835,21,0	0/0:11,0:11:4.82:0,5,346	0/0:24,0:19:56.89:0,57,951	0/0:14,0:11:26.91:0,27,462	0/1:29,0:29:6.53:7,0,1267	0/0:25,0:25:68.91:0,69,710	0/0:17,0:17:46.05:0,46,445	0/0:30,0:30:19.09:0,19,973	0/0:21,0:21:60.19:0,60,1646	0/0:23,0:23:31.49:0,31,1105	0/1:16,0:16:28.31:28,0,597	0/0:11,0:11:33.09:0,33,702	1/1:1,9:13:36.12:1553,36,0	1/1:1,8:16:30.10:1054,30,0	0/0:27,0:27:7.63:0,8,1234	0/1:19,0:19:32.75:33,0,649	0/1:22,0:22:32.57:33,0,550	0/1:11,0:10:27.76:28,0,260	0/1:26,0:26:27.82:28,0,888	0/0:23,0:23:9.23:0,9,1031	0/0:19,0:19:38.13:0,38,944	0/0:23,0:23:69.19:0,69,1706	0/0:21,0:21:63.16:0,63,1807	0/0:18,0:18:24.68:0,25,1392	0/1:23,0:23:12.73:13,0,807	0/0:30,0:30:37.81:0,38,1407	0/1:16,0:16:6.55:7,0,652	0/0:7,0:7:12.71:0,13,271
chr10	80803613	.	GAA	G	1148.64	PASS	AB=0.857;AC=7;AF=0.125;AN=56;BaseQRankSum=8.986;DP=438;FS=2.221;HRun=8;HaplotypeScore=58.1151;InbreedingCoeff=0.8101;MQ=76.46;MQ0=0;MQRankSum=-1.056;QD=24.44;ReadPosRankSum=1.786;VQSLOD=2.7311;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:45.14:549,45,0	0/0:4,0:4:12.04:0,12,203	0/1:5,0:6:15.10:15,0,151	0/0:12,0:12:19.61:0,20,266	0/0:32,0:32:93.31:0,93,1551	0/0:3,0:16:29.94:0,30,105	0/0:1,0:14:29.94:0,30,105	0/0:23,0:23:63.22:0,63,1064	0/0:16,0:16:48.16:0,48,812	0/0:24,0:24:60.21:0,60,1015	0/0:29,0:29:87.30:0,87,1464	0/0:7,0:7:21.07:0,21,355	1/1:0,6:6:18.06:220,18,0	1/1:1,15:16:42.13:512,42,0	0/0:18,0:18:54.18:0,54,911	0/0:22,0:22:57.20:0,57,964	0/0:4,0:4:12.04:0,12,203	0/0:11,0:11:27.09:0,27,457	0/0:19,0:19:48.16:0,48,812	0/0:17,0:17:51.17:0,51,858	0/0:12,0:12:36.12:0,36,607	0/0:15,0:15:42.13:0,42,685	0/0:19,0:19:54.18:0,54,910	0/0:13,0:13:39.13:0,39,660	0/0:14,0:14:39.13:0,39,658	0/0:23,0:23:60.21:0,60,1010	0/0:23,0:23:60.19:0,60,981	0/0:4,0:4:12.04:0,12,203
chr10	80804216	.	GAT	G	1026.99	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.047;DP=556;FS=6.412;HRun=0;HaplotypeScore=78.6517;InbreedingCoeff=0.9802;MQ=73.58;MQ0=0;MQRankSum=0.244;QD=36.68;ReadPosRankSum=-0.332;VQSLOD=5.1530;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:51.17:0,51,953	0/0:10,0:10:30.10:0,30,562	0/0:15,0:15:45.09:0,45,740	0/0:6,0:6:12.51:0,13,180	0/0:37,0:37:99:0,99,1822	1/1:0,18:18:48.16:707,48,0	1/1:0,10:10:30.10:442,30,0	0/0:30,0:30:84.27:0,84,1501	0/0:21,0:21:60.21:0,60,1122	0/0:28,0:28:81.28:0,81,1509	0/0:36,0:36:99:0,108,2000	0/0:16,0:16:48.16:0,48,871	0/0:22,0:22:66.22:0,66,1183	0/0:17,0:17:39.13:0,39,730	0/0:17,0:17:48.16:0,48,898	0/0:17,0:17:51.17:0,51,955	0/0:26,0:26:75.26:0,75,1402	0/0:6,0:6:18.06:0,18,337	0/0:18,0:17:48.16:0,48,889	0/0:35,0:35:99:0,105,1918	0/0:14,0:14:42.14:0,42,787	0/0:24,0:24:72.23:0,72,1303	0/0:21,0:21:63.22:0,63,1180	0/0:18,0:18:54.17:0,54,971	0/0:23,0:23:69.24:0,69,1273	0/0:26,0:26:78.27:0,78,1432	0/0:16,0:16:48.15:0,48,859	0/0:9,0:9:24.08:0,24,400
chr10	80804362	.	CCTCTCT	C	305.76	PASS	AC=10;AF=0.200;AN=50;BaseQRankSum=2.666;DP=596;FS=2.792;HRun=0;HaplotypeScore=137.3065;InbreedingCoeff=0.5746;MQ=61.72;MQ0=24;MQRankSum=-2.341;QD=3.29;ReadPosRankSum=0.459;VQSLOD=2.4911;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:7:2.92:0,3,79	./.	0/0:55,0:18:0.94:0,1,1	0/0:28,0:28:9.03:0,9,183	0/0:21,0:20:14.17:0,14,308	0/0:24,0:23:9.03:0,9,173	0/0:29,0:28:5.93:0,6,63	0/0:24,0:24:18.06:0,18,411	0/0:24,0:25:21.07:0,21,448	0/0:24,0:24:3:0,3,25	0/0:10,0:10:9.03:0,9,265	1/1:12,0:12:2.04:6,2,0	./.	0/0:18,0:21:9.03:0,9,221	0/0:15,0:21:12.03:0,12,272	0/0:12,0:14:6.49:0,6,169	0/0:10,0:9:3.01:0,3,77	1/1:13,4:17:2.08:75,2,0	1/1:19,6:23:11.95:149,12,0	1/1:17,7:21:3.01:56,3,0	0/0:15,0:16:21.07:0,21,400	0/0:23,0:23:12.03:0,12,289	0/0:20,0:19:21.01:0,21,392	0/0:26,0:26:9.03:0,9,199	0/0:19,0:23:27.64:0,28,376	1/1:12,3:15:11.71:150,12,0	0/0:9,0:8:6.02:0,6,159
chr10	80804411	.	CTGTTTG	C	553.35	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=5.061;DP=450;FS=16.746;HRun=0;HaplotypeScore=102.2112;InbreedingCoeff=0.6577;MQ=62.98;MQ0=12;MQRankSum=-5.733;QD=11.77;ReadPosRankSum=0.523;VQSLOD=1.2794;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,8:10:8.99:161,9,0	0/0:3,0:3:2.92:0,3,76	0/0:17,0:12:36.11:0,36,856	0/0:27,0:16:27.35:0,27,475	0/0:21,0:21:54.18:0,54,1382	0/0:25,0:24:54.67:0,55,1240	0/0:12,0:11:26.57:0,27,644	0/0:20,0:19:42.41:0,42,1045	0/0:15,0:15:37.81:0,38,978	0/0:28,0:28:25.98:0,26,1843	0/0:20,0:20:49.05:0,49,1210	0/0:9,0:9:24.08:0,24,690	1/1:0,9:9:24.08:434,24,0	1/1:1,8:8:3.01:54,3,0	0/0:18,0:18:36.10:0,36,949	0/0:17,0:17:36.12:0,36,943	0/0:20,0:19:4.94:0,5,741	0/0:8,0:7:21.02:0,21,423	0/0:16,0:13:28.74:0,29,896	0/0:19,0:19:28.86:0,29,926	0/0:26,0:23:31.79:0,32,704	0/0:17,0:17:45.15:0,45,1202	0/0:10,0:10:24.08:0,24,652	0/0:16,0:16:30.99:0,31,881	0/0:16,0:16:12.91:0,13,901	0/0:19,0:18:50.71:0,51,1296	0/1:19,0:19:37:37,0,733	0/0:4,0:4:12.04:0,12,363
chr10	80804771	.	C	CT	972.25	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=3.364;DP=516;FS=0.730;HRun=4;HaplotypeScore=60.3534;InbreedingCoeff=0.8500;MQ=76.45;MQ0=0;MQRankSum=0.830;QD=23.15;ReadPosRankSum=0.659;VQSLOD=2.5704;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:33.10:0,33,401	0/0:7,0:7:21.06:0,21,252	0/1:12,0:12:2.11:2,0,239	0/0:11,0:10:24.06:0,24,275	0/0:31,0:31:90.28:0,90,1080	1/1:1,18:19:54.18:756,54,0	1/1:1,10:11:24.08:336,24,0	0/0:33,0:33:81.24:0,81,962	0/0:22,0:22:66.20:0,66,791	0/0:29,0:29:84.26:0,84,1008	0/0:24,0:24:63.05:0,63,723	0/0:15,0:15:45.14:0,45,540	0/0:16,0:16:48.15:0,48,573	0/0:15,0:15:45.14:0,45,540	0/0:17,0:17:51.16:0,51,612	0/0:15,0:15:45.13:0,45,528	0/0:25,0:25:66.19:0,66,777	0/0:17,0:17:39.07:0,39,456	0/0:26,0:26:69.17:0,69,794	0/0:25,0:24:69.21:0,69,827	0/0:13,0:13:39.12:0,39,466	0/0:16,0:16:45.14:0,45,540	0/0:17,0:17:48.15:0,48,576	0/0:13,0:13:36.11:0,36,432	0/0:16,0:16:48.15:0,48,576	0/0:25,0:25:75.23:0,75,899	0/0:21,0:21:63.18:0,63,743	0/0:10,0:10:30.09:0,30,360
chr10	80804979	.	GTTTA	G	2302.58	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.664;DP=524;FS=1.297;HRun=0;HaplotypeScore=84.3198;InbreedingCoeff=0.9611;MQ=87.04;MQ0=0;MQRankSum=-6.174;QD=46.99;ReadPosRankSum=1.886;VQSLOD=4.3358;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:21.07:440,21,0	0/0:10,0:10:30.09:0,30,808	0/0:17,0:17:48.06:0,48,1158	0/0:21,0:21:63.20:0,63,1453	0/0:23,0:23:69.24:0,69,1965	0/0:23,0:22:69.24:0,69,1935	0/0:14,0:14:42.14:0,42,1202	0/0:33,0:32:99:0,99,2713	0/0:21,0:21:63.22:0,63,1755	0/0:27,0:27:81.28:0,81,2286	0/0:37,0:37:99:0,111,3063	0/0:13,0:13:39.13:0,39,1093	1/1:0,17:17:39.13:818,39,0	1/1:0,21:21:57.20:1187,57,0	0/0:11,0:11:33.11:0,33,917	0/0:16,0:16:48.16:0,48,1392	0/0:8,0:8:24.08:0,24,695	0/0:2,0:2:6.02:0,6,174	0/0:11,0:11:33.11:0,33,899	0/0:38,0:38:99:0,111,3120	0/0:17,0:17:51.18:0,51,1480	0/0:17,0:17:51.18:0,51,1440	0/0:16,0:16:45.15:0,45,1303	0/0:11,0:11:33.11:0,33,956	0/0:14,0:14:42.14:0,42,1138	0/0:30,0:30:90.31:0,90,2603	0/0:30,0:29:90.31:0,90,2580	0/0:15,0:15:45.15:0,45,1287
chr10	80805276	.	TA	T	5018.98	PASS	AB=0.804;AC=33;AF=0.589;AN=56;BaseQRankSum=2.275;DP=451;FS=5.213;HRun=11;HaplotypeScore=55.1272;InbreedingCoeff=0.7405;MQ=71.29;MQ0=0;MQRankSum=1.507;QD=15.44;ReadPosRankSum=2.610;VQSLOD=5.4436;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:8:8.52:0,9,43	1/1:0,4:4:8.99:74,9,0	0/1:14,0:9:6.06:6,0,53	0/0:17,0:12:4.44:0,4,33	1/1:6,20:27:39.15:418,39,0	0/1:20,3:24:26.65:27,0,394	0/0:12,0:12:24.05:0,24,249	1/1:10,16:28:51.59:398,52,0	0/0:10,0:10:21.02:0,21,208	1/1:5,15:20:21.36:334,21,0	1/1:2,22:26:35:472,35,0	0/0:12,0:12:30.06:0,30,312	0/0:3,0:12:31.69:0,32,175	0/0:3,0:18:39.98:0,40,209	1/1:1,15:16:41.95:345,42,0	1/1:2,16:18:35.94:296,36,0	1/1:1,6:8:20.01:154,20,0	0/1:2,8:10:25.21:124,0,25	1/1:5,15:20:21.35:335,21,0	1/1:9,24:34:38.89:510,39,0	1/1:1,9:11:26.01:203,26,0	0/0:14,0:15:38.93:0,39,398	0/0:14,0:14:41.97:0,42,426	0/0:8,0:8:18.05:0,18,192	1/1:2,10:13:29:228,29,0	1/1:2,12:15:40.90:315,41,0	1/1:1,22:23:62.92:517,63,0	1/1:1,13:14:6.98:264,7,0
chr10	80805630	.	GT	G	2918.66	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.336;DP=541;FS=1.408;HRun=4;HaplotypeScore=56.9557;InbreedingCoeff=0.9923;MQ=82.21;MQ0=0;MQRankSum=-2.282;QD=31.72;ReadPosRankSum=1.480;VQSLOD=4.1503;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:75.23:900,75,0	0/0:4,0:4:12.04:0,12,168	0/0:16,0:16:45.15:0,45,606	0/0:17,0:17:45.07:0,45,563	0/0:30,0:30:84.28:0,84,1174	1/1:0,23:23:69.21:827,69,0	1/1:1,11:12:30.09:360,30,0	0/0:38,0:38:99:0,99,1371	0/0:20,0:20:57.18:0,57,780	0/0:21,0:21:63.21:0,63,880	0/0:22,0:22:60.19:0,60,823	0/0:16,0:16:48.15:0,48,654	1/1:0,15:15:45.14:540,45,0	1/1:0,16:16:39.12:468,39,0	0/0:24,0:24:72.23:0,72,991	0/0:14,0:14:39.12:0,39,529	0/0:11,0:11:30.09:0,30,403	0/0:12,0:12:33.10:0,33,444	0/0:24,0:24:72.23:0,72,989	0/0:31,0:31:90.30:0,90,1260	0/0:25,0:25:72.24:0,72,1008	0/0:19,0:19:54.18:0,54,756	0/0:16,0:16:45.15:0,45,629	0/0:18,0:18:54.18:0,54,754	0/0:15,0:15:45.15:0,45,630	0/0:22,0:22:63.20:0,63,868	0/0:25,0:25:70.93:0,71,988	0/0:9,0:9:27.09:0,27,378
chr10	80805854	.	AT	A	974.30	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=8.131;DP=491;FS=0.000;HRun=9;HaplotypeScore=84.4209;InbreedingCoeff=0.8441;MQ=79.00;MQ0=0;MQRankSum=-1.988;QD=14.33;ReadPosRankSum=0.147;VQSLOD=3.6863;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:29:62.94:566,63,0	0/0:14,0:14:42.12:0,42,484	0/0:14,0:14:24.02:0,24,235	0/1:13,0:12:0.06:0,0,138	0/0:21,0:21:55.69:0,56,614	0/0:2,0:10:25.81:0,26,139	0/0:3,0:19:37.06:0,37,193	0/0:25,0:25:63.15:0,63,712	0/0:13,1:14:11.65:0,12,387	0/0:18,0:18:51.15:0,51,589	0/0:24,0:24:57.09:0,57,628	0/0:12,0:12:36.11:0,36,415	1/1:0,8:8:18.01:165,18,0	1/1:2,16:18:42.02:384,42,0	0/0:28,0:28:75.18:0,75,834	0/0:14,0:14:39.12:0,39,450	0/0:22,0:21:51.15:0,51,588	0/0:7,0:7:17.83:0,18,207	0/0:11,0:11:24.06:0,24,270	0/0:28,0:28:78.23:0,78,900	0/0:12,0:12:30.09:0,30,346	0/0:18,0:18:48.08:0,48,537	0/0:19,0:19:48.13:0,48,545	0/0:13,0:13:36.11:0,36,414	0/0:28,0:27:78.19:0,78,864	0/0:30,0:30:78.20:0,78,871	0/0:20,0:19:51.15:0,51,589	0/0:2,0:2:3.01:0,3,35
chr10	80805906	.	CT	C	754.28	PASS	AB=0.983;AC=9;AF=0.161;AN=56;BaseQRankSum=8.345;DP=509;FS=2.963;HRun=4;HaplotypeScore=96.8514;InbreedingCoeff=0.7928;MQ=76.45;MQ0=14;MQRankSum=-5.471;QD=7.12;ReadPosRankSum=1.342;VQSLOD=0.3749;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,12:22:42.10:463,42,0	0/0:8,0:8:17.92:0,18,190	0/1:58,1:16:13.19:13,0,245	0/0:62,0:27:18.85:0,19,431	0/0:22,0:22:42.02:0,42,494	1/1:7,0:7:11.17:35,11,0	0/0:7,0:7:6.40:0,6,41	0/0:31,0:31:75.10:0,75,862	0/0:8,0:8:20.79:0,21,225	0/0:14,0:14:38.79:0,39,449	0/0:18,0:18:43.04:0,43,452	0/0:8,0:8:20.79:0,21,223	1/1:1,3:4:9.03:101,9,0	1/1:5,8:12:30.04:299,30,0	0/0:21,0:21:40.99:0,41,397	0/0:13,0:13:24.24:0,24,365	0/0:22,0:21:41.62:0,42,400	0/0:12,0:12:24:0,24,231	0/0:23,0:22:47.95:0,48,544	0/0:20,0:20:52.70:0,53,655	0/0:7,0:7:18.05:0,18,210	0/0:16,0:16:39.87:0,40,463	0/0:22,0:22:51.26:0,51,641	0/0:13,0:13:26.93:0,27,322	0/0:18,0:18:31.31:0,31,400	0/0:22,0:22:48.65:0,49,546	0/0:14,0:14:30.06:0,30,356	0/0:2,0:2:6.01:0,6,67
chr10	80805907	.	TTTTC	T	895.47	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=7.781;DP=518;FS=1.942;HRun=0;HaplotypeScore=116.9855;InbreedingCoeff=0.8231;MQ=76.54;MQ0=14;MQRankSum=-5.425;QD=16.28;ReadPosRankSum=0.757;VQSLOD=3.2466;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:21:30.65:336,31,0	0/0:7,0:7:17.99:0,18,212	0/0:60,0:16:4.65:0,5,228	0/0:65,0:28:16.55:0,17,373	0/0:22,0:22:43.29:0,43,439	1/1:3,4:7:21.06:337,21,0	0/1:8,0:8:3.32:56,0,3	0/0:31,0:31:73.06:0,73,806	0/0:9,0:9:22.61:0,23,361	0/0:15,0:15:35.91:0,36,395	0/0:18,0:18:44.58:0,45,454	0/0:8,0:8:10.41:0,10,271	1/1:4,0:4:8.81:71,9,0	1/1:14,0:13:20.58:254,21,0	0/0:20,0:20:45.28:0,45,465	0/0:13,0:13:35.38:0,35,368	0/0:23,0:22:42.76:0,43,456	0/0:13,0:13:19.95:0,20,220	0/0:23,0:22:52.94:0,53,520	0/0:21,0:21:53.56:0,54,603	0/0:7,0:7:17.42:0,17,203	0/0:16,0:16:42.43:0,42,411	0/0:21,0:21:47.25:0,47,775	0/0:14,0:14:29.35:0,29,376	0/0:19,0:19:30.72:0,31,375	0/0:21,0:21:49.53:0,50,532	0/0:14,0:14:26.88:0,27,331	0/0:2,0:2:6.02:0,6,104
chr10	80805911	.	CT	C	1152.83	PASS	AB=0.805;AC=35;AF=0.625;AN=56;BaseQRankSum=1.062;DP=539;FS=1.832;HRun=17;HaplotypeScore=96.4315;InbreedingCoeff=0.0950;MQ=71.35;MQ0=19;MQRankSum=1.228;QD=2.69;ReadPosRankSum=3.881;VQSLOD=-0.0885;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,5:21:13.70:63,14,0	1/1:1,4:6:13.70:72,14,0	0/1:69,0:13:1.28:1,0,57	0/0:70,0:27:13.36:0,13,127	0/1:15,2:21:42.49:52,0,42	1/1:9,0:9:10.07:28,10,0	0/0:5,0:6:8.78:0,9,56	1/1:17,12:31:13.10:156,13,0	0/0:10,0:10:13.20:0,13,110	1/1:9,4:14:4.56:60,5,0	1/1:10,10:20:15.17:84,15,0	0/0:10,0:10:3.12:0,3,101	1/1:2,1:4:2.18:7,2,0	1/1:5,4:12:0.73:27,1,0	0/1:8,11:20:5.15:102,0,5	1/1:12,2:15:1.45:54,1,0	1/1:9,13:23:4.46:106,4,0	1/1:7,5:11:17.18:90,17,0	0/1:17,5:21:11.99:88,0,12	0/1:13,7:21:23.13:65,0,23	1/1:6,2:8:13.19:61,13,0	0/1:19,1:20:1.78:2,0,57	0/1:17,1:19:7.32:7,0,181	0/0:12,1:14:4.05:0,4,115	0/1:11,10:21:7.65:56,0,8	0/1:13,10:23:19.82:93,0,20	0/1:7,3:13:11.45:32,0,11	0/1:2,0:2:10.77:11,0,18
chr10	80806062	.	GT	G	494.19	PASS	AB=1.000;AC=5;AF=0.093;AN=54;BaseQRankSum=7.267;DP=407;FS=5.995;HRun=6;HaplotypeScore=41.2282;InbreedingCoeff=0.8354;MQ=66.25;MQ0=0;MQRankSum=-0.566;QD=16.47;ReadPosRankSum=-1.110;VQSLOD=2.5285;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:72.22:0,72,931	0/0:6,0:6:18.06:0,18,235	0/1:8,0:8:1.97:2,0,203	./.	0/0:21,0:21:60.18:0,60,763	1/1:0,14:14:39.10:419,39,0	1/1:0,8:8:18.04:193,18,0	0/0:35,0:35:87.28:0,87,1144	0/0:10,0:10:30.10:0,30,395	0/0:28,0:28:84.27:0,84,1101	0/0:11,0:11:27.09:0,27,355	0/0:12,0:12:33.11:0,33,434	0/0:7,0:7:21.07:0,21,276	0/0:11,0:11:33.11:0,33,433	0/0:24,0:24:69.20:0,69,879	0/0:14,0:14:42.14:0,42,553	0/0:25,0:25:72.23:0,72,947	0/0:12,0:12:33.11:0,33,433	0/0:22,0:22:63.20:0,63,816	0/0:5,0:5:15.05:0,15,197	0/0:15,0:15:45.13:0,45,577	0/0:11,0:11:33.10:0,33,419	0/0:14,0:14:39.12:0,39,500	0/0:10,0:10:30.09:0,30,381	0/0:16,0:16:45.15:0,45,592	0/0:19,0:19:57.17:0,57,736	0/0:13,0:13:36.12:0,36,474	0/0:6,0:6:18.06:0,18,236
chr10	80806338	.	A	AT	115.99	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=4.400;DP=244;FS=4.510;HRun=7;HaplotypeScore=44.3311;InbreedingCoeff=0.4776;MQ=80.64;MQ0=3;MQRankSum=-2.667;QD=16.57;ReadPosRankSum=0.359;VQSLOD=3.1242;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:12.02:0,12,113	0/0:7,0:7:15.02:0,15,145	0/0:21,0:15:19.55:0,20,133	0/0:18,0:10:8.18:0,8,74	0/0:14,0:14:39.06:0,39,377	1/1:2,5:7:20.88:207,21,0	./.	0/0:19,0:19:42.05:0,42,401	0/0:3,0:3:6.01:0,6,58	0/0:20,0:20:54.09:0,54,521	0/0:10,0:10:30.05:0,30,290	0/0:2,0:2:6.01:0,6,58	0/0:5,0:5:12.02:0,12,114	0/0:5,0:5:3:0,3,29	0/0:9,0:9:21.03:0,21,203	0/0:7,0:7:12.01:0,12,114	0/0:11,0:11:24.04:0,24,231	0/0:5,0:5:15.02:0,15,145	0/0:15,0:15:36.93:0,37,344	0/0:6,0:6:15.02:0,15,145	0/0:5,0:5:12.02:0,12,116	0/0:2,0:2:3:0,3,29	0/0:4,0:4:9.01:0,9,87	./.	0/0:10,0:10:30.05:0,30,290	0/0:14,0:14:39.06:0,39,377	0/0:9,0:9:27.04:0,27,260	0/0:5,0:5:6.37:0,6,83
chr10	80806346	.	CT	C	173.38	PASS	AB=1.000;AC=10;AF=0.200;AN=50;BaseQRankSum=-1.715;DP=229;FS=4.326;HRun=9;HaplotypeScore=42.4520;InbreedingCoeff=0.4606;MQ=77.65;MQ0=9;MQRankSum=-0.045;QD=5.10;ReadPosRankSum=-2.410;VQSLOD=-0.4636;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:12.01:110,12,0	0/0:6,0:5:10.27:0,10,59	0/0:19,0:13:11.98:0,12,156	0/0:17,0:9:8.83:0,9,94	0/0:14,0:14:0.18:0,0,98	1/1:7,0:7:0.78:10,1,0	./.	0/0:18,0:17:26.83:0,27,160	0/0:3,0:3:6.02:0,6,66	0/0:18,0:18:37.92:0,38,187	0/0:10,0:10:20.09:0,20,111	0/0:2,0:2:6:0,6,59	1/1:0,6:6:15.01:137,15,0	1/1:0,3:3:3:27,3,0	0/1:7,0:7:7.44:7,0,55	0/1:4,0:4:8.64:17,0,9	0/0:11,0:9:20.46:0,20,125	0/0:9,0:6:14.77:0,15,110	0/0:16,0:16:5.96:0,6,131	0/0:6,0:6:11.57:0,12,64	0/0:4,0:4:8.73:0,9,52	./.	0/0:4,0:3:3.01:0,3,34	./.	0/0:11,0:11:20.57:0,21,122	0/0:13,0:13:27.90:0,28,150	0/0:9,0:9:16.67:0,17,112	0/0:4,0:4:8.35:0,8,41
chr10	80806353	.	TTTA	T	219.51	PASS	AB=1.000;AC=5;AF=0.096;AN=52;BaseQRankSum=5.587;DP=225;FS=0.000;HRun=0;HaplotypeScore=49.0440;InbreedingCoeff=0.4140;MQ=68.42;MQ0=24;MQRankSum=-3.498;QD=8.44;ReadPosRankSum=-0.915;VQSLOD=2.3775;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:7:11.90:0,12,84	0/0:6,0:5:15.02:0,15,160	0/0:17,0:11:10.85:0,11,214	0/1:14,0:6:10.13:10,0,146	0/0:13,0:13:33.86:0,34,346	1/1:3,6:9:26.84:301,27,0	1/1:3,0:1:2.97:20,3,0	0/0:15,0:14:41.97:0,42,440	0/0:2,0:2:6.02:0,6,119	0/0:18,0:17:50.92:0,51,518	0/0:9,0:8:21.05:0,21,247	0/0:3,0:2:2.97:0,3,25	0/0:8,0:6:14.89:0,15,107	0/0:3,0:3:2.98:0,3,21	0/0:6,0:6:15.89:0,16,168	0/0:3,0:3:6.90:0,7,65	0/0:14,0:9:24:0,24,279	0/0:8,0:5:15.05:0,15,209	0/0:16,0:16:39.93:0,40,431	0/0:4,0:4:12.04:0,12,141	0/0:6,0:4:9.01:0,9,111	./.	0/0:2,0:1:3:0,3,25	./.	0/0:11,0:11:30.07:0,30,333	0/0:12,0:12:36.08:0,36,396	0/0:9,0:9:27.03:0,27,299	0/0:4,0:4:1.69:0,2,63
chr10	80813984	.	G	GCA	514.12	PASS	AB=0.625;AC=5;AF=0.093;AN=54;BaseQRankSum=3.706;DP=391;FS=14.216;HRun=0;HaplotypeScore=40.3530;InbreedingCoeff=0.4565;MQ=36.51;MQ0=99;MQRankSum=-2.687;QD=22.35;ReadPosRankSum=-0.776;VQSLOD=2.2781;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:3:3.01:52,3,0	0/0:8,0:5:15.05:0,15,221	0/0:26,1:5:8.11:0,8,84	0/0:25,0:2:6.02:0,6,88	0/0:12,0:10:18.06:0,18,265	0/0:9,0:5:6.02:0,6,88	0/0:4,0:2:6.02:0,6,88	./.	0/0:18,0:16:30.10:0,30,434	0/0:15,0:8:24.05:0,24,329	0/0:4,0:3:9.01:0,9,112	0/0:25,0:22:41.74:0,42,611	1/1:1,4:6:15.05:263,15,0	0/1:4,6:9:52.41:312,0,52	0/0:9,0:6:15.05:0,15,221	0/0:12,0:5:12:0,12,145	0/0:30,0:11:15.05:0,15,221	0/0:22,0:13:33.07:0,33,454	0/0:14,0:4:12.04:0,12,177	0/0:16,0:10:18.06:0,18,265	0/0:11,0:5:3.01:0,3,44	0/0:10,0:8:18.06:0,18,265	0/0:10,0:8:15.05:0,15,220	0/0:21,0:17:27.05:0,27,373	0/0:11,0:8:17.72:0,18,217	0/0:17,0:10:30.10:0,30,442	0/0:15,0:5:12.04:0,12,177	0/0:10,0:4:9.03:0,9,132
chr10	80815335	.	C	CT	487.20	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.063;DP=429;FS=5.498;HRun=1;HaplotypeScore=45.9831;InbreedingCoeff=0.8790;MQ=45.30;MQ0=46;MQRankSum=-3.204;QD=16.24;ReadPosRankSum=-0.692;VQSLOD=3.2323;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:33.11:0,33,428	0/0:6,0:6:18.06:0,18,233	1/1:6,0:3:3:29,3,0	0/0:7,0:2:5.99:0,6,61	0/0:25,0:24:63.19:0,63,802	1/1:0,17:17:50.88:434,51,0	1/1:0,7:7:20:155,20,0	0/0:18,0:15:45.13:0,45,559	0/0:8,0:8:17.95:0,18,233	0/0:31,0:26:75.24:0,75,963	0/0:29,0:26:63.20:0,63,817	0/0:11,0:10:27.09:0,27,350	0/0:20,0:17:51.17:0,51,661	0/0:13,0:12:30.10:0,30,389	0/0:8,0:7:18.05:0,18,219	0/0:14,0:13:33.11:0,33,428	0/0:24,0:20:42.14:0,42,544	0/0:12,0:11:33.06:0,33,409	0/0:13,0:10:27.09:0,27,351	0/0:26,0:25:69.22:0,69,895	0/0:10,0:8:18.06:0,18,234	0/0:18,0:17:42.13:0,42,531	0/0:16,0:15:36.12:0,36,467	0/0:6,0:6:18.06:0,18,234	0/0:25,0:24:63.20:0,63,812	0/0:16,0:14:39.12:0,39,495	0/0:18,0:16:39.13:0,39,506	0/0:11,0:11:18.06:0,18,230
chr10	80815337	.	CAT	C	620.63	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.136;DP=425;FS=4.126;HRun=0;HaplotypeScore=50.5485;InbreedingCoeff=0.8225;MQ=43.97;MQ0=51;MQRankSum=-2.972;QD=24.83;ReadPosRankSum=-0.801;VQSLOD=3.5962;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:36.08:0,36,689	0/0:6,0:6:18.06:0,18,365	0/0:3,0:1:3.01:0,3,37	0/0:7,0:2:3.01:0,3,61	0/0:25,0:24:66.14:0,66,1212	1/1:1,17:18:54.07:534,54,0	1/1:0,7:7:21.03:207,21,0	0/0:19,0:13:39.13:0,39,792	0/0:8,0:8:18.06:0,18,349	0/0:31,0:26:72.24:0,72,1429	0/0:30,0:27:66.17:0,66,1261	0/0:12,0:11:27.09:0,27,547	0/0:20,0:17:51.16:0,51,997	0/0:14,0:13:30.10:0,30,607	0/0:8,0:7:18.03:0,18,324	0/0:13,0:12:36.07:0,36,654	0/0:23,0:19:42.12:0,42,807	0/0:11,0:10:30.10:0,30,609	0/0:14,0:11:33.11:0,33,605	0/0:25,0:24:72.19:0,72,1381	0/0:9,0:7:18.06:0,18,362	0/0:18,0:17:39.13:0,39,790	0/0:15,0:14:42.06:0,42,770	0/0:6,0:6:18.06:0,18,366	0/0:26,0:24:72.10:0,72,1301	0/0:15,0:13:39.13:0,39,780	0/0:19,0:16:39.13:0,39,791	0/0:8,0:8:18:0,18,284
chr10	80815801	.	CT	C	1263.88	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.483;DP=492;FS=0.520;HRun=10;HaplotypeScore=50.4361;InbreedingCoeff=0.9174;MQ=51.37;MQ0=28;MQRankSum=-0.488;QD=20.39;ReadPosRankSum=0.009;VQSLOD=4.1880;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,35:35:92.97:807,93,0	0/0:4,0:3:9.02:0,9,100	0/0:13,0:4:8.89:0,9,81	0/0:15,0:6:11.97:0,12,109	0/0:21,0:20:57.15:0,57,628	0/0:1,0:15:37.10:0,37,203	0/0:3,0:16:34.09:0,34,170	0/0:29,0:22:63.16:0,63,690	0/0:13,0:13:36.10:0,36,398	0/0:30,0:29:84.23:0,84,929	0/0:27,0:25:69.19:0,69,760	0/0:14,0:13:36.06:0,36,384	1/1:1,11:12:29.99:260,30,0	1/1:0,14:13:38.99:339,39,0	0/0:12,0:13:32.92:0,33,346	0/0:15,0:14:42.06:0,42,444	0/0:28,1:27:46.11:0,46,723	0/0:17,0:15:38.84:0,39,410	0/0:16,1:15:16.06:0,16,405	0/0:21,1:20:34.11:0,34,602	0/0:8,0:8:24.06:0,24,265	0/0:13,1:13:13.31:0,13,360	0/0:19,0:18:45.12:0,45,498	0/0:17,0:17:42.11:0,42,465	0/0:16,0:16:45.12:0,45,498	0/0:21,0:21:60.14:0,60,653	0/0:16,0:16:48.13:0,48,528	0/0:6,1:4:9.02:0,9,100
chr10	80816023	.	GGGAATA	G	1309.71	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.533;DP=565;FS=4.156;HRun=0;HaplotypeScore=117.3532;InbreedingCoeff=0.9937;MQ=93.44;MQ0=0;MQRankSum=-7.882;QD=43.66;ReadPosRankSum=-0.419;VQSLOD=3.2439;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.29:0,84,2854	0/0:10,0:10:27.09:0,27,916	0/0:27,0:27:78.27:0,78,2569	0/0:29,0:29:77.87:0,78,2419	0/0:22,0:22:66.23:0,66,2347	1/1:0,20:20:48.16:1081,48,0	1/1:2,8:10:17.98:348,18,0	0/0:23,0:23:60.21:0,60,2086	0/0:27,0:27:81.28:0,81,2837	0/0:25,0:25:75.26:0,75,2652	0/0:25,0:25:72.25:0,72,2519	0/0:21,0:21:60.21:0,60,2094	0/0:16,0:16:42.14:0,42,1424	0/0:27,0:27:75.26:0,75,2618	0/0:18,0:18:48.16:0,48,1709	0/0:19,0:19:54.19:0,54,1924	0/0:19,0:19:51.18:0,51,1797	0/0:11,0:11:33.11:0,33,1173	0/0:16,0:16:42.14:0,42,1491	0/0:24,0:24:66.23:0,66,2345	0/0:24,0:24:69.24:0,69,2458	0/0:15,0:15:42.14:0,42,1450	0/0:20,0:20:60.21:0,60,2114	0/0:24,0:24:72.25:0,72,2530	0/0:12,0:12:30.10:0,30,998	0/0:25,0:25:72.25:0,72,2542	0/0:19,0:19:57.20:0,57,2026	0/0:8,0:8:24.08:0,24,811
chr10	80816170	.	GC	G	3481.76	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-1.447;DP=596;FS=0.426;HRun=1;HaplotypeScore=81.6003;InbreedingCoeff=0.9965;MQ=84.08;MQ0=0;MQRankSum=-1.579;QD=38.69;ReadPosRankSum=3.406;VQSLOD=4.2685;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,45:45:99:1762,126,0	0/0:10,0:10:30.09:0,30,449	0/0:19,1:20:39.44:0,39,734	0/0:17,0:17:39.29:0,39,666	0/0:23,0:23:69.24:0,69,1102	0/0:24,0:24:62.80:0,63,992	0/0:16,0:16:48.16:0,48,762	0/0:24,0:24:72.23:0,72,1129	0/0:22,0:22:66.20:0,66,1010	0/0:32,0:32:96.33:0,96,1534	0/0:22,0:22:63.21:0,63,1007	0/0:20,0:20:60.19:0,60,934	1/1:0,22:22:54.18:754,54,0	1/1:0,23:23:69.23:965,69,0	0/0:22,0:22:66.19:0,66,1002	0/0:20,0:20:60.20:0,60,957	0/0:21,0:21:63.21:0,63,1007	0/0:9,0:9:27.09:0,27,432	0/0:14,0:14:42.13:0,42,650	0/0:22,0:22:66.23:0,66,1051	0/0:39,0:39:99:0,114,1820	0/0:14,0:14:42.14:0,42,654	0/0:16,0:16:48.15:0,48,742	0/0:31,0:31:93.30:0,93,1439	0/0:15,0:15:42.14:0,42,671	0/0:26,0:26:78.27:0,78,1246	0/0:21,0:21:63.18:0,63,960	0/0:6,0:6:18.01:0,18,236
chr10	80817697	.	AT	A	679.27	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.091;DP=496;FS=3.520;HRun=7;HaplotypeScore=50.0229;InbreedingCoeff=0.9694;MQ=73.43;MQ0=0;MQRankSum=0.325;QD=22.64;ReadPosRankSum=2.061;VQSLOD=3.3912;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:33.11:0,33,415	0/0:9,0:9:27.09:0,27,340	0/0:10,0:10:17.38:0,17,275	0/0:14,0:14:33.09:0,33,390	0/0:29,0:29:81.24:0,81,995	1/1:3,22:25:66.15:673,66,0	1/1:0,5:5:12.03:122,12,0	0/0:35,0:35:99:0,99,1234	0/0:9,0:9:27.09:0,27,340	0/0:31,0:31:78.25:0,78,976	0/0:30,0:30:81.23:0,81,982	0/0:21,0:21:60.19:0,60,755	0/0:12,0:12:33.11:0,33,415	0/0:20,0:20:60.19:0,60,754	0/0:18,0:18:54.17:0,54,679	0/0:15,0:15:45.14:0,45,566	0/0:12,0:12:36.11:0,36,450	0/0:10,0:10:21.01:0,21,246	0/0:22,1:23:23.56:0,24,611	0/0:36,0:36:90.25:0,90,1085	0/0:8,0:8:18.06:0,18,226	0/0:19,0:19:57.18:0,57,717	0/0:13,0:13:30.08:0,30,354	0/0:12,0:12:36.12:0,36,453	0/0:11,0:11:27.09:0,27,339	0/0:22,0:22:57.18:0,57,717	0/0:16,0:16:48.15:0,48,603	0/0:19,0:19:57.18:0,57,717
chr10	80819388	.	CT	C	8951.21	PASS	AB=0.526;AC=37;AF=0.661;AN=56;BaseQRankSum=6.914;DP=438;FS=14.368;HRun=7;HaplotypeScore=47.2283;InbreedingCoeff=0.9072;MQ=81.20;MQ0=0;MQRankSum=-2.966;QD=27.29;ReadPosRankSum=1.466;VQSLOD=4.1067;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:41.23:427,41,0	1/1:0,9:9:27.06:275,27,0	0/0:14,0:14:27.08:0,27,330	0/0:12,0:11:27.94:0,28,304	1/1:2,19:21:51.11:520,51,0	0/0:18,0:18:48.14:0,48,592	0/0:6,0:6:18.04:0,18,213	1/1:4,32:36:96.19:966,96,0	0/0:16,0:16:48.15:0,48,604	1/1:0,17:17:51.12:520,51,0	1/1:0,14:14:39.09:398,39,0	0/0:7,0:7:18.06:0,18,226	1/1:2,21:23:60.14:612,60,0	1/1:0,11:11:33.08:337,33,0	1/1:1,21:22:60.14:612,60,0	0/1:1,9:10:7.67:245,0,8	1/1:1,12:13:36.08:367,36,0	1/1:0,17:17:48.11:490,48,0	1/1:3,14:17:4.33:353,4,0	1/1:2,22:24:63.14:643,63,0	1/1:0,13:13:36.08:367,36,0	0/0:9,0:9:24.08:0,24,302	0/0:18,0:18:54.17:0,54,679	0/0:10,0:10:30.10:0,30,377	1/1:1,13:14:33.07:337,33,0	1/1:1,22:23:66.09:655,66,0	1/1:0,17:17:48.11:490,48,0	1/1:0,11:11:33.08:337,33,0
chr10	80820484	.	ATT	A	6145.17	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=1.793;DP=316;FS=16.361;HRun=11;HaplotypeScore=42.3170;InbreedingCoeff=0.8359;MQ=65.92;MQ0=0;MQRankSum=2.068;QD=24.78;ReadPosRankSum=-0.604;VQSLOD=2.4419;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:13:30.42:0,30,114	1/1:0,3:3:9.02:96,9,0	0/1:5,0:5:10.91:22,0,11	0/0:3,0:2:2.92:0,3,17	1/1:3,20:23:60.15:639,60,0	1/1:0,18:18:45.11:479,45,0	1/1:3,3:6:9.01:96,9,0	1/1:5,17:22:50.90:515,51,0	0/0:11,0:11:30.09:0,30,441	1/1:1,7:8:21.05:223,21,0	1/1:1,14:15:39.10:415,39,0	0/0:9,0:9:24.08:0,24,370	0/0:0,0:9:17.47:0,17,60	0/0:0,0:3:4.99:0,5,17	1/1:0,8:8:21.05:224,21,0	1/1:0,7:7:21.05:224,21,0	1/1:4,17:21:45.10:479,45,0	1/1:1,6:7:15.04:160,15,0	1/1:3,11:14:33.07:351,33,0	1/1:1,14:15:39.09:415,39,0	1/1:3,7:10:21.02:223,21,0	0/0:2,0:3:9.03:0,9,121	0/0:14,0:14:39.12:0,39,580	0/0:3,0:3:9.03:0,9,139	1/1:2,16:18:42.10:447,42,0	1/1:2,15:17:45.07:469,45,0	1/1:2,15:17:39.01:415,39,0	1/1:4,10:14:24.05:255,24,0
chr10	80822048	.	GTGTGTT	G	2717.13	PASS	AB=0.921;AC=34;AF=0.607;AN=56;BaseQRankSum=6.942;DP=545;FS=17.770;HRun=0;HaplotypeScore=125.8852;InbreedingCoeff=-0.2147;MQ=51.74;MQ0=45;MQRankSum=4.646;QD=5.61;ReadPosRankSum=-1.417;VQSLOD=0.9598;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:29:19.68:223,20,0	0/1:14,0:13:46.38:93,0,46	0/0:18,0:3:5.74:0,6,34	0/1:18,0:3:6.59:7,0,24	0/1:18,0:17:24.56:74,0,25	1/1:18,0:18:28.94:222,29,0	1/1:22,0:16:9.21:120,9,0	0/1:16,0:13:55.12:82,0,55	0/0:20,0:20:5.25:0,5,420	0/1:21,0:20:9.67:241,0,10	0/1:13,0:13:14.40:51,0,14	0/1:18,0:18:54.30:54,0,137	1/1:14,0:14:17.78:139,18,0	1/1:20,0:18:14.88:126,15,0	0/1:6,26:30:22.63:61,0,23	0/1:5,12:16:41.60:60,0,42	1/1:23,0:22:13.69:144,14,0	0/1:14,0:9:16.13:96,0,16	0/1:21,0:19:80.27:80,0,105	0/1:4,9:13:9.37:69,0,9	0/1:25,0:17:46.96:61,0,47	0/0:22,0:19:13.53:0,14,338	0/1:19,0:19:30.56:31,0,242	0/1:26,0:24:1.97:2,0,583	1/1:21,0:19:1.82:279,2,0	0/1:25,0:25:31.51:230,0,32	1/1:16,0:16:10.71:242,11,0	1/1:9,0:5:14.80:98,15,0
chr10	80822054	.	T	TTG	2656.73	PASS	AB=0.980;AC=20;AF=0.357;AN=56;BaseQRankSum=1.386;DP=545;FS=10.675;HRun=0;HaplotypeScore=104.0875;InbreedingCoeff=-0.1941;MQ=51.72;MQ0=45;MQRankSum=2.868;QD=8.12;ReadPosRankSum=-1.813;VQSLOD=2.4638;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:5.17:0,5,15	0/1:14,0:13:69.31:92,0,69	0/0:23,0:4:2.55:0,3,11	0/0:25,0:6:2.71:0,3,91	0/1:17,0:16:49.10:128,0,49	0/1:20,0:20:4.49:28,0,4	0/0:21,0:15:7:0,7,19	0/1:14,0:12:16.14:186,0,16	0/0:19,0:19:33.02:0,33,374	0/1:22,0:21:52.46:306,0,52	0/1:12,0:12:20.07:124,0,20	0/0:19,0:19:13.77:0,14,121	0/1:9,0:9:7.32:7,0,18	0/0:16,0:14:7.82:0,8,27	0/1:32,0:30:7.76:8,0,30	0/1:17,0:16:5.53:6,0,61	0/1:12,11:22:22.05:30,0,22	1/1:16,0:11:15.05:214,15,0	0/1:20,0:18:46.56:170,0,47	0/1:12,0:12:20.09:119,0,20	0/1:23,0:16:56.80:73,0,57	0/0:20,0:17:29.42:0,29,320	0/0:22,0:22:25.07:0,25,242	0/0:26,0:24:40.72:0,41,402	0/1:23,0:21:3.11:320,0,3	0/1:25,0:25:25.35:436,0,25	0/1:17,0:17:4.46:347,0,4	1/1:11,0:7:15.05:224,15,0
chr10	80822488	.	AT	A	5182.67	PASS	AB=0.941;AC=46;AF=0.821;AN=56;BaseQRankSum=9.325;DP=468;FS=5.680;HRun=2;HaplotypeScore=227.7740;InbreedingCoeff=-0.0227;MQ=44.44;MQ0=0;MQRankSum=-1.837;QD=11.15;ReadPosRankSum=9.699;VQSLOD=2.6242;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:30.81:239,31,0	0/1:12,0:12:12.92:96,0,13	0/0:3,0:2:2.98:0,3,22	0/1:6,0:4:34.21:61,0,34	0/1:2,19:21:6.57:94,0,7	0/1:25,0:25:40.66:232,0,41	1/1:14,0:14:37.41:197,37,0	1/1:20,0:19:22.67:176,23,0	1/1:16,0:16:22.20:198,22,0	0/1:18,0:18:40.02:84,0,40	0/1:22,0:22:7.82:193,0,8	1/1:21,0:21:32.31:254,32,0	1/1:10,0:10:28.93:173,29,0	1/1:18,0:18:51.48:289,51,0	1/1:21,0:21:60.27:340,60,0	1/1:17,0:17:40.28:201,40,0	1/1:21,0:21:53.64:273,54,0	1/1:19,0:19:27.58:206,28,0	1/1:13,0:13:32.24:161,32,0	1/1:25,0:24:59.87:322,60,0	0/1:23,0:23:5.76:178,0,6	1/1:17,0:17:47.55:242,48,0	0/1:25,0:25:20.50:235,0,20	1/1:9,0:9:25.93:144,26,0	1/1:13,0:13:29.68:164,30,0	1/1:16,0:16:43.40:202,43,0	1/1:14,0:14:12.48:142,12,0	1/1:6,0:6:16.96:87,17,0
chr10	80823259	.	CTTCTT	C	2721.03	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.614;DP=503;FS=0.580;HRun=0;HaplotypeScore=96.8302;InbreedingCoeff=0.9982;MQ=59.98;MQ0=0;MQRankSum=-9.922;QD=50.39;ReadPosRankSum=1.657;VQSLOD=3.9353;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:33.11:703,33,0	0/0:11,0:11:33.11:0,33,1046	0/0:11,0:10:27.08:0,27,716	0/0:17,0:17:42.11:0,42,1174	0/0:26,0:26:78.27:0,78,2352	0/0:20,0:20:60.21:0,60,1887	0/0:9,0:9:27.09:0,27,873	0/0:25,0:25:75.26:0,75,2225	0/0:19,0:19:57.20:0,57,1833	0/0:28,0:28:81.28:0,81,2610	0/0:20,0:20:60.21:0,60,1812	0/0:14,0:14:42.14:0,42,1357	1/1:1,15:16:33.11:734,33,0	1/1:0,23:23:66.23:1427,66,0	0/0:22,0:22:63.21:0,63,1811	0/0:22,0:22:63.22:0,63,1978	0/0:10,0:10:30.10:0,30,939	0/0:14,0:14:42.10:0,42,1231	0/0:24,0:24:72.25:0,72,2121	0/0:26,0:26:78.27:0,78,2453	0/0:12,0:12:36.12:0,36,1139	0/0:23,0:23:69.22:0,69,2108	0/0:16,0:16:48.16:0,48,1446	0/0:11,0:11:30.06:0,30,843	0/0:9,0:9:27.09:0,27,868	0/0:18,0:18:54.18:0,54,1676	0/0:25,0:25:75.25:0,75,2341	0/0:17,0:17:51.17:0,51,1538
chr10	80825091	.	CCCG	C	1239.46	PASS	AB=0.956;AC=20;AF=0.357;AN=56;BaseQRankSum=6.923;DP=321;FS=27.180;HRun=0;HaplotypeScore=67.0263;InbreedingCoeff=0.0214;MQ=85.67;MQ0=2;MQRankSum=-3.747;QD=6.11;ReadPosRankSum=8.770;VQSLOD=0.0239;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:2.97:0,3,96	1/1:4,1:5:14.67:105,15,0	0/0:42,0:23:37.32:0,37,517	0/1:24,0:16:44.83:45,0,142	0/1:16,0:16:64.92:65,0,101	0/0:9,0:9:23.94:0,24,345	0/0:9,0:9:20.28:0,20,253	0/1:16,0:16:47.52:66,0,48	0/0:6,0:6:15.02:0,15,210	0/1:13,0:13:15.25:23,0,15	0/1:17,0:17:74.55:75,0,85	0/0:3,0:3:5.99:0,6,48	0/0:8,0:8:11.99:0,12,157	0/0:11,0:11:26.94:0,27,384	0/1:11,0:11:23.04:85,0,23	0/1:6,1:7:50.62:56,0,51	0/1:7,0:7:21.43:28,0,21	0/1:7,3:10:18.76:102,0,19	0/1:12,1:13:45.64:84,0,46	1/1:17,0:17:12.29:144,12,0	1/1:9,1:10:8.72:67,9,0	0/0:6,0:6:8.95:0,9,76	0/0:8,0:8:20.95:0,21,264	0/0:8,0:8:20.95:0,21,278	0/1:8,0:8:3.41:75,0,3	0/1:8,1:9:22.55:122,0,23	1/1:19,1:20:34.78:274,35,0	0/0:2,0:2:2.68:0,3,11
chr10	80825360	.	ATT	A	7746.53	PASS	AB=0.758;AC=38;AF=0.679;AN=56;BaseQRankSum=8.344;DP=514;FS=11.642;HRun=12;HaplotypeScore=79.6391;InbreedingCoeff=0.8441;MQ=70.29;MQ0=4;MQRankSum=-1.821;QD=20.55;ReadPosRankSum=3.004;VQSLOD=3.0788;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:26:42.55:240,43,0	1/1:0,8:8:24.05:244,24,0	0/1:14,0:13:3.85:4,0,248	0/0:18,0:16:29.83:0,30,339	1/1:3,24:27:66.10:671,66,0	0/0:15,0:15:39.13:0,39,581	0/0:9,0:11:26.58:0,27,360	1/1:11,20:31:60.09:610,60,0	0/0:22,0:22:63.14:0,63,887	1/1:4,23:27:69.09:692,69,0	1/1:1,20:21:53.35:548,53,0	0/0:10,0:10:24.08:0,24,358	1/1:4,0:12:19.05:82,19,0	1/1:3,0:20:41.16:180,41,0	1/1:2,19:22:44.83:510,45,0	1/1:3,14:16:39.08:397,39,0	1/1:0,14:13:36.08:366,36,0	1/1:2,3:5:6.01:61,6,0	1/1:2,9:11:27.05:275,27,0	1/1:2,23:24:64.02:643,64,0	0/1:3,8:11:19.53:190,0,20	0/0:16,0:19:50.01:0,50,669	0/0:22,0:22:51.16:0,51,738	0/0:19,0:19:57.19:0,57,841	1/1:4,14:19:35.78:418,36,0	1/1:1,21:22:63.14:641,63,0	1/1:7,30:37:75.12:763,75,0	1/1:0,7:7:21.05:214,21,0
chr10	80826786	.	AACACACACAC	A	2179.73	PASS	AB=0.909;AC=23;AF=0.411;AN=56;BaseQRankSum=-0.819;DP=599;FS=3.107;HRun=0;HaplotypeScore=204.0678;InbreedingCoeff=0.4295;MQ=66.01;MQ0=11;MQRankSum=0.720;QD=8.97;ReadPosRankSum=0.617;VQSLOD=2.5399;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:13.14:0,13,133	0/1:5,1:6:0:0,0,0	0/0:38,0:24:14.85:0,15,104	0/0:43,0:33:9:0,9,78	1/1:7,10:17:2.84:14,3,0	0/0:20,0:20:14.63:0,15,116	0/0:21,0:20:3:0,3,25	0/1:26,0:25:80.28:80,0,100	0/0:15,0:16:33.08:0,33,1026	1/1:23,0:24:32.98:490,33,0	0/1:12,2:14:11.52:144,0,12	0/0:11,0:11:21.07:0,21,719	0/0:25,0:25:38.93:0,39,639	0/0:28,0:27:19.72:0,20,227	1/1:4,11:16:2.99:24,3,0	1/1:7,0:8:6:61,6,0	0/1:21,2:24:1.48:464,0,1	0/1:9,0:9:5.53:162,0,6	0/1:14,0:14:13.52:103,0,14	1/1:14,14:28:5.96:47,6,0	0/0:35,23:56:0:0,0,0	0/0:14,0:15:30.06:0,30,1023	0/0:16,0:15:31.31:0,31,715	0/0:30,0:31:52.81:0,53,1185	1/1:15,1:17:21:273,21,0	0/1:11,6:17:57.24:175,0,57	1/1:14,1:16:14.98:164,15,0	1/1:5,0:5:6.02:155,6,0
chr10	80826825	.	ACT	A	974.76	PASS	AB=0.980;AC=25;AF=0.446;AN=56;BaseQRankSum=9.608;DP=598;FS=51.013;HRun=0;HaplotypeScore=138.9892;InbreedingCoeff=-0.1088;MQ=44.01;MQ0=33;MQRankSum=-2.185;QD=2.55;ReadPosRankSum=-2.872;VQSLOD=0.3115;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,6:28:5.99:68,6,0	0/1:6,0:6:8.99:9,0,40	0/1:29,0:10:18.61:26,0,19	0/0:39,0:10:1.74:0,2,69	0/0:24,0:22:17.69:0,18,139	1/1:15,0:15:5.99:49,6,0	1/1:19,1:18:8.95:71,9,0	0/0:26,0:25:44.58:0,45,485	0/1:17,1:16:31.24:31,0,324	0/1:20,0:20:67.81:68,0,167	0/1:16,0:16:50.27:50,0,90	0/1:16,0:16:22.67:23,0,238	1/1:21,6:27:32.04:348,32,0	1/1:20,3:23:17.78:147,18,0	0/1:17,0:17:8.38:8,0,70	0/0:7,0:7:1.95:0,2,87	0/1:20,0:20:67.61:68,0,106	0/1:12,0:10:44.06:62,0,44	0/1:16,0:11:1.83:2,0,143	0/1:26,0:24:3.50:4,0,130	0/0:74,0:65:38.70:0,39,321	0/0:13,0:13:24.20:0,24,430	0/1:17,0:16:6.38:6,0,261	0/1:31,0:31:26.54:27,0,487	0/1:18,1:19:61.35:61,0,109	0/0:18,0:18:9.95:0,10,183	0/0:14,0:14:20.83:0,21,181	0/1:4,1:3:15.92:16,0,17
chr10	80826840	.	GACAC	G	95.62	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.719;DP=596;FS=7.158;HRun=0;HaplotypeScore=148.9872;InbreedingCoeff=0.6142;MQ=47.37;MQ0=26;MQRankSum=-1.125;QD=4.78;ReadPosRankSum=-0.595;VQSLOD=1.8527;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:31:5.99:0,6,50	0/0:5,0:5:9.03:0,9,211	0/0:48,0:17:23.22:0,23,578	0/0:67,0:16:16.37:0,16,456	0/0:17,0:17:17.91:0,18,462	0/0:6,7:13:0:0,0,0	1/1:20,0:19:14.84:183,15,0	0/0:25,0:25:66.01:0,66,1391	0/0:17,0:16:45.13:0,45,903	0/0:13,0:13:35.33:0,35,816	0/0:11,0:11:18.06:0,18,421	0/0:20,0:20:41.94:0,42,935	0/0:27,0:28:18.97:0,19,228	0/0:19,0:19:5.67:0,6,33	0/0:15,0:15:15.05:0,15,340	0/0:9,0:9:20.10:0,20,408	0/0:21,0:21:42.01:0,42,753	0/0:15,0:13:17.09:0,17,275	0/0:13,0:10:23.88:0,24,411	0/0:24,0:24:26.90:0,27,682	0/0:64,0:62:63.21:0,63,1420	0/0:15,0:15:33.11:0,33,781	0/0:10,0:10:21.07:0,21,431	0/0:22,0:22:54.16:0,54,1241	0/0:17,0:17:5.50:0,6,479	0/0:13,0:13:38.62:0,39,783	0/0:13,0:13:23.65:0,24,560	0/0:9,0:9:6.32:0,6,252
chr10	80826871	.	T	TCA	686.29	PASS	AB=0.899;AC=7;AF=0.125;AN=56;BaseQRankSum=7.158;DP=636;FS=7.900;HRun=0;HaplotypeScore=116.7082;InbreedingCoeff=0.4914;MQ=46.16;MQ0=40;MQRankSum=-1.745;QD=6.24;ReadPosRankSum=-3.132;VQSLOD=1.7013;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,15:30:18.06:302,18,0	0/0:8,0:7:10.31:0,10,122	0/0:86,0:19:35.54:0,36,358	0/0:94,0:14:24.08:0,24,305	0/0:12,0:12:15.52:0,16,193	0/0:12,0:13:2.79:0,3,33	0/0:16,0:16:20.69:0,21,270	0/0:20,0:16:6.60:0,7,276	0/0:10,0:10:18.04:0,18,216	0/0:18,0:16:38.72:0,39,433	0/0:14,0:14:18.06:0,18,224	0/0:17,0:17:30.09:0,30,371	1/1:10,13:23:32.99:454,33,0	0/1:9,7:16:2.79:45,0,3	0/0:15,0:15:11.93:0,12,154	0/0:10,0:10:21.05:0,21,239	0/1:29,0:29:13.44:13,0,415	0/0:19,0:18:10.87:0,11,186	0/0:15,0:15:20.15:0,20,319	0/0:19,0:18:17.92:0,18,334	0/0:45,0:44:51.01:0,51,630	0/1:12,0:11:9.82:10,0,104	0/0:4,0:4:9.03:0,9,116	0/0:30,0:30:63.16:0,63,756	0/0:18,0:18:16.85:0,17,252	0/0:17,0:17:20.75:0,21,409	0/0:14,0:14:15.78:0,16,249	0/0:8,0:9:16.71:0,17,220
chr10	80827048	.	TA	T	1022.96	PASS	AB=0.889;AC=7;AF=0.125;AN=56;BaseQRankSum=7.186;DP=427;FS=0.645;HRun=6;HaplotypeScore=38.9466;InbreedingCoeff=0.7941;MQ=70.85;MQ0=0;MQRankSum=0.075;QD=18.27;ReadPosRankSum=1.153;VQSLOD=2.6782;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:26:60.15:645,60,0	0/0:6,0:6:18.06:0,18,237	0/0:8,0:8:15.05:0,15,195	0/0:6,0:6:12:0,12,110	0/0:29,0:29:75.23:0,75,971	0/0:14,0:14:36.02:0,36,437	0/0:5,0:5:15.05:0,15,197	0/0:33,0:33:90.26:0,90,1132	0/0:8,0:8:24.08:0,24,315	0/0:23,0:23:63.16:0,63,809	0/0:34,0:34:90.29:0,90,1184	0/0:13,0:13:33.09:0,33,418	1/1:0,12:12:27.07:290,27,0	1/1:2,8:10:21.05:226,21,0	0/0:7,0:7:18.06:0,18,236	0/0:9,0:9:27.09:0,27,349	0/0:19,0:19:51.10:0,51,633	0/0:16,0:16:45.15:0,45,592	0/1:7,1:8:8.18:8,0,252	0/0:28,0:28:78.22:0,78,996	0/0:3,0:3:6.02:0,6,79	0/0:9,0:9:21.07:0,21,276	0/0:17,0:17:48.16:0,48,632	0/0:4,0:4:11.95:0,12,119	0/0:21,0:21:63.20:0,63,829	0/0:22,0:22:60.19:0,60,776	0/0:25,0:24:69.22:0,69,904	0/0:12,0:12:27.09:0,27,355
chr10	80827686	.	GTCC	G	2769.23	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.385;DP=575;FS=9.011;HRun=0;HaplotypeScore=81.3467;InbreedingCoeff=0.9873;MQ=88.97;MQ0=0;MQRankSum=-6.310;QD=44.67;ReadPosRankSum=2.120;VQSLOD=5.0154;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:63.22:1074,63,0	0/0:7,0:7:21.07:0,21,483	0/0:23,0:23:69.24:0,69,1550	0/0:21,0:21:53.83:0,54,1088	0/0:19,0:19:57.20:0,57,1309	0/0:28,0:28:84.29:0,84,1932	0/0:12,0:12:36.12:0,36,827	0/0:21,0:21:57.20:0,57,1300	0/0:27,0:27:81.28:0,81,1863	0/0:30,0:30:90.31:0,90,2035	0/0:26,0:26:78.27:0,78,1790	0/0:22,0:22:63.20:0,63,1396	1/1:0,17:17:51.17:868,51,0	1/1:0,20:20:57.20:970,57,0	0/0:15,0:15:42.14:0,42,964	0/0:17,0:17:51.18:0,51,1176	0/0:27,0:27:81.28:0,81,1841	0/0:5,0:5:12.04:0,12,277	0/0:15,0:15:45.15:0,45,1002	0/0:30,0:30:90.31:0,90,2069	0/0:26,0:26:75.26:0,75,1698	0/0:19,0:19:57.20:0,57,1315	0/0:21,0:21:63.22:0,63,1435	0/0:24,0:24:49.24:0,49,1498	0/0:21,0:21:63.20:0,63,1365	0/0:20,0:20:57.20:0,57,1301	0/0:28,0:27:81.28:0,81,1829	0/0:9,0:9:27.09:0,27,621
chr10	80828783	.	GT	G	14867.93	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.618;DP=603;FS=4.122;HRun=7;HaplotypeScore=65.3143;InbreedingCoeff=0.9145;MQ=86.89;MQ0=0;MQRankSum=-10.019;QD=26.50;ReadPosRankSum=5.848;VQSLOD=5.1873;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:81.18:826,81,0	1/1:1,11:12:33.08:337,33,0	0/0:18,0:18:42.13:0,42,512	0/0:24,0:24:66.19:0,66,791	1/1:2,22:24:66.15:671,66,0	1/1:0,22:22:63.14:643,63,0	1/1:0,14:14:42.10:428,42,0	1/1:4,21:25:63.13:636,63,0	1/1:0,14:14:35.95:367,36,0	1/1:3,24:27:72.14:723,72,0	1/1:2,25:27:69.15:704,69,0	1/1:2,15:17:36.07:367,36,0	1/1:3,20:23:57.13:579,57,0	1/1:1,23:24:63.14:642,63,0	1/1:4,13:17:39.04:387,39,0	1/1:0,20:20:57.13:581,57,0	1/1:2,14:16:42.09:428,42,0	1/1:2,1:3:3:31,3,0	1/1:5,21:26:63.14:643,63,0	1/1:3,22:25:63.14:642,63,0	1/1:0,19:19:54.12:551,54,0	1/1:5,27:32:75.16:765,75,0	1/1:4,26:30:78.17:796,78,0	1/1:0,20:20:54.12:551,54,0	1/1:1,24:25:69.15:704,69,0	1/1:0,22:22:63.14:642,63,0	1/1:3,38:40:99:1010,99,0	1/1:0,7:7:21.05:214,21,0
chr10	80830329	.	CT	C	7166.18	PASS	AB=0.810;AC=37;AF=0.661;AN=56;BaseQRankSum=11.839;DP=535;FS=11.420;HRun=11;HaplotypeScore=79.4044;InbreedingCoeff=0.7991;MQ=73.55;MQ0=1;MQRankSum=-0.422;QD=17.92;ReadPosRankSum=1.966;VQSLOD=5.3079;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.14:0,60,632	1/1:2,8:11:26.01:203,26,0	0/0:27,0:19:24.61:0,25,268	0/1:14,1:11:13.42:13,0,56	1/1:4,25:29:65.85:535,66,0	1/1:1,15:16:38.95:320,39,0	0/1:6,14:20:13.25:254,0,13	1/1:9,25:34:74.86:609,75,0	0/0:17,0:17:39.57:0,40,417	1/1:3,27:30:71.90:591,72,0	1/1:2,26:28:77.90:640,78,0	0/0:14,1:15:14.43:0,14,344	0/0:18,0:18:39.07:0,39,395	0/1:8,1:9:0.50:1,0,191	1/1:2,11:14:25.99:202,26,0	1/1:1,19:20:47.93:394,48,0	1/1:1,27:28:71.91:591,72,0	1/1:1,12:13:32.96:271,33,0	1/1:2,10:12:26.95:222,27,0	1/1:1,22:23:59.89:491,60,0	1/1:1,11:12:20.97:172,21,0	0/0:8,0:8:18.03:0,18,185	0/0:24,0:24:60.15:0,60,639	0/0:6,0:6:15.04:0,15,160	1/1:2,30:32:71.90:591,72,0	1/1:6,16:22:47.91:394,48,0	1/1:2,21:23:61.97:499,62,0	1/1:1,7:8:20.96:172,21,0
chr10	80832360	.	T	TC	14216.54	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=14.166;DP=491;FS=11.160;HRun=1;HaplotypeScore=82.3958;InbreedingCoeff=0.9887;MQ=90.51;MQ0=0;MQRankSum=-4.300;QD=43.08;ReadPosRankSum=1.122;VQSLOD=4.2523;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.21:0,63,877	1/1:0,4:4:9.03:144,9,0	0/0:27,0:27:75.22:0,75,990	0/0:16,0:16:34.89:0,35,550	1/1:0,27:27:69.12:1054,69,0	1/1:0,18:18:51.17:814,51,0	1/1:0,15:15:36.12:574,36,0	1/1:2,33:35:96.22:1492,96,0	0/0:17,0:17:51.16:0,51,695	1/1:1,20:21:60.08:901,60,0	1/1:1,14:15:32.94:492,33,0	0/0:12,0:12:36.12:0,36,503	0/0:14,0:14:42.14:0,42,587	0/0:13,0:13:39.13:0,39,543	1/1:1,22:23:66.23:1053,66,0	1/1:0,17:17:48.16:766,48,0	1/1:1,16:17:48.16:766,48,0	1/1:0,12:12:33.11:521,33,0	1/1:1,17:18:54.07:809,54,0	1/1:0,29:29:75.26:1197,75,0	1/1:0,22:22:63.21:1005,63,0	0/0:9,0:9:27.09:0,27,375	0/0:16,0:16:48.16:0,48,671	0/0:16,0:16:45.15:0,45,629	1/1:0,14:14:42.14:670,42,0	1/1:0,16:16:48.16:762,48,0	1/1:0,22:22:60.20:957,60,0	1/1:0,5:5:15.05:239,15,0
chr10	80832825	.	AATCATGCT	A	15189.66	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=17.377;DP=559;FS=0.344;HRun=0;HaplotypeScore=165.4403;InbreedingCoeff=0.9269;MQ=76.25;MQ0=0;MQRankSum=-16.088;QD=52.02;ReadPosRankSum=0.031;VQSLOD=4.7214;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.21:0,60,2566	1/1:2,8:10:21.07:569,21,0	0/0:21,0:21:51.17:0,51,1889	0/0:18,0:18:33.11:0,33,1329	1/1:3,32:35:72.20:1657,72,0	0/0:20,0:20:60.21:0,60,2559	0/0:22,0:22:66.23:0,66,2831	1/1:4,20:24:63.13:1314,63,0	0/0:25,0:25:69.22:0,69,2841	1/1:3,22:25:63.22:1701,63,0	1/1:0,21:21:48.63:976,49,0	0/0:33,0:33:93.32:0,93,3855	0/0:25,0:25:66.23:0,66,2792	0/0:22,0:22:66.23:0,66,2739	1/1:2,16:18:45.15:1219,45,0	1/1:3,14:17:33.11:894,33,0	1/1:1,11:12:27.09:703,27,0	1/1:2,1:3:3.01:81,3,0	1/1:2,12:14:36.08:798,36,0	1/1:5,25:30:60.20:1358,60,0	1/1:3,5:8:3.01:81,3,0	0/0:17,0:17:51.18:0,51,2092	0/0:25,0:25:63.20:0,63,2538	0/0:16,0:16:48.16:0,48,1982	1/1:1,17:18:42.14:821,42,0	1/1:4,15:19:45.14:1158,45,0	1/1:2,30:30:69.23:1777,69,0	1/1:5,1:6:3.01:81,3,0
chr10	80834391	.	CA	C	975.49	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=7.988;DP=516;FS=1.373;HRun=6;HaplotypeScore=45.8407;InbreedingCoeff=0.8517;MQ=74.88;MQ0=0;MQRankSum=-2.621;QD=20.76;ReadPosRankSum=0.841;VQSLOD=2.8061;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:24.08:0,24,316	0/0:10,0:10:30.10:0,30,395	0/0:10,0:10:30.09:0,30,369	0/1:9,0:9:2.05:2,0,176	0/0:36,0:36:99:0,99,1288	1/1:1,23:24:63.16:677,63,0	1/1:1,13:14:39.10:419,39,0	0/0:24,0:24:66.21:0,66,854	0/0:19,0:19:51.17:0,51,671	0/0:25,0:25:69.22:0,69,896	0/0:25,0:25:75.24:0,75,987	0/0:14,0:14:42.14:0,42,553	0/0:18,0:18:54.16:0,54,693	0/0:15,0:15:45.13:0,45,570	0/0:14,0:14:39.10:0,39,484	0/0:18,0:18:54.18:0,54,711	0/0:30,0:30:81.24:0,81,1049	0/0:10,0:10:24.08:0,24,316	0/0:17,0:17:48.16:0,48,632	0/0:31,0:31:93.30:0,93,1219	0/0:13,0:13:39.13:0,39,513	0/0:21,0:21:63.20:0,63,827	0/0:21,0:21:57.19:0,57,750	0/0:18,0:18:51.17:0,51,671	0/0:21,0:21:57.16:0,57,733	0/0:20,0:20:54.17:0,54,699	0/0:21,0:21:63.20:0,63,827	0/0:10,0:10:24.08:0,24,316
chr10	80835340	.	TAA	T	6905.54	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-2.271;DP=546;FS=13.443;HRun=13;HaplotypeScore=74.8695;InbreedingCoeff=0.9864;MQ=58.88;MQ0=0;MQRankSum=1.488;QD=21.51;ReadPosRankSum=2.954;VQSLOD=3.0226;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:23:54.92:0,55,509	1/1:0,8:8:21.03:204,21,0	0/0:15,0:14:11.96:0,12,101	0/0:14,0:11:11.32:0,11,136	1/1:6,15:22:36.83:400,37,0	0/0:4,0:20:35.44:0,35,136	0/0:3,1:23:16.33:0,16,117	1/1:12,25:37:39.01:402,39,0	0/0:18,0:19:47.61:0,48,620	1/1:3,25:29:74.83:709,75,0	1/1:2,9:11:27.03:262,27,0	0/0:18,0:18:46.29:0,46,595	0/0:6,0:19:27.03:0,27,260	0/0:4,0:22:42.06:0,42,411	1/1:2,21:23:51.05:495,51,0	1/1:4,18:22:45.01:436,45,0	1/1:4,16:20:42.03:403,42,0	1/1:2,18:20:51.05:495,51,0	1/1:2,13:15:39.04:376,39,0	1/1:7,26:33:72:698,72,0	1/1:3,10:13:27.01:262,27,0	0/0:10,0:10:22.89:0,23,308	0/0:15,0:18:39.08:0,39,525	0/0:21,0:21:54.15:0,54,729	1/1:2,15:17:45.06:436,45,0	1/1:2,15:17:45.06:436,45,0	1/1:4,24:28:75.06:717,75,0	1/1:0,6:6:18.03:175,18,0
chr10	80836013	.	CCACA	C	2278.76	PASS	AB=0.829;AC=31;AF=0.620;AN=50;BaseQRankSum=-3.172;DP=513;FS=6.826;HRun=0;HaplotypeScore=99.4476;InbreedingCoeff=0.5320;MQ=70.35;MQ0=19;MQRankSum=-0.751;QD=7.94;ReadPosRankSum=2.451;VQSLOD=1.9300;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:2.30:2,0,96	1/1:4,5:10:12.03:167,12,0	./.	./.	1/1:11,3:14:9.50:140,10,0	0/0:10,0:15:10.98:0,11,49	0/0:13,0:16:5.49:0,5,24	1/1:27,0:27:2.97:21,3,0	0/0:12,0:14:2.74:0,3,12	1/1:15,0:19:12.28:98,12,0	1/1:6,1:8:6.01:74,6,0	0/1:7,2:15:70.19:70,0,81	0/0:15,0:16:18.02:0,18,269	0/0:18,0:19:9.03:0,9,173	1/1:9,13:23:42.08:632,42,0	1/1:12,7:19:11.52:313,12,0	./.	0/0:8,0:8:6.02:0,6,103	1/1:11,2:12:3.01:46,3,0	1/1:18,4:23:12.50:168,13,0	1/1:17,5:20:4.92:91,5,0	0/1:16,0:19:17.21:17,0,20	0/0:14,0:19:8.23:0,8,37	0/0:16,0:21:19.48:0,19,138	1/1:9,5:14:6.02:93,6,0	1/1:10,3:14:11.17:166,11,0	1/1:17,5:21:18.06:279,18,0	1/1:2,1:4:6.01:74,6,0
chr10	80837958	.	T	TAC	43.44	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.735;DP=660;FS=1.773;HRun=0;HaplotypeScore=153.5508;InbreedingCoeff=0.8222;MQ=61.08;MQ0=2;MQRankSum=-1.499;QD=1.11;ReadPosRankSum=-0.398;VQSLOD=2.1668;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:97.41:0,97,1200	0/0:5,0:5:15.05:0,15,206	0/0:32,0:25:62.08:0,62,812	0/0:32,0:25:65.02:0,65,858	0/0:29,0:29:78.26:0,78,1061	1/1:19,2:21:6.90:71,7,0	1/1:15,2:18:9.56:76,10,0	0/0:24,0:24:63.19:0,63,828	0/0:26,0:26:66.18:0,66,881	0/0:43,0:43:99:0,111,1438	0/0:23,0:23:66.16:0,66,838	0/0:22,0:22:51.06:0,51,654	0/0:14,0:14:27.05:0,27,334	0/0:18,0:18:45.14:0,45,612	0/0:22,0:22:48.16:0,48,656	0/0:9,0:9:18.06:0,18,247	0/0:23,0:23:57.19:0,57,770	0/0:14,0:14:23.78:0,24,297	0/0:18,0:18:47.93:0,48,623	0/0:31,0:31:90.28:0,90,1215	0/0:31,0:31:87.27:0,87,1173	0/0:20,0:20:51.61:0,52,663	0/0:24,0:24:69.10:0,69,868	0/0:33,0:33:78.92:0,79,1002	0/0:24,0:24:60.19:0,60,803	0/0:29,0:29:84.17:0,84,1046	0/0:29,0:27:81.22:0,81,1047	0/0:9,0:9:2.48:0,2,40
chr10	80837983	.	ACGCGCG	A	300.90	PASS	AB=0.857;AC=3;AF=0.054;AN=56;BaseQRankSum=1.576;DP=727;FS=0.000;HRun=0;HaplotypeScore=216.0393;InbreedingCoeff=0.6523;MQ=60.99;MQ0=5;MQRankSum=-0.085;QD=7.52;ReadPosRankSum=-4.237;VQSLOD=1.2974;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,1:43:99:0,108,3350	0/0:9,0:9:27.09:0,27,697	0/0:34,0:19:44.28:0,44,1027	0/0:52,0:32:51.80:0,52,1315	0/0:35,0:35:99:0,105,2382	1/1:19,3:22:7.83:310,8,0	0/1:15,3:18:3.05:86,0,3	0/0:33,0:33:96.33:0,96,2275	0/0:23,0:23:66.23:0,66,2150	0/0:36,0:36:99:0,99,2303	0/0:31,0:31:59.90:0,60,2017	0/0:19,0:19:51.16:0,51,1602	0/0:11,0:11:27.09:0,27,877	0/0:22,0:22:48.16:0,48,1587	0/0:28,0:28:57.12:0,57,1405	0/0:15,0:15:33.11:0,33,795	0/0:26,0:26:59.83:0,60,1530	0/0:9,0:9:27.09:0,27,572	0/0:24,0:23:66.02:0,66,1432	0/0:32,0:32:96.31:0,96,2479	0/0:40,0:40:99:0,111,2768	0/0:25,0:25:75.22:0,75,2154	0/0:24,0:24:72.19:0,72,2166	0/0:36,0:36:86.99:0,87,2514	0/0:20,0:20:51.12:0,51,1319	0/0:29,0:29:87.28:0,87,2275	0/0:29,0:28:81.28:0,81,2080	0/0:1,0:1:3.01:0,3,108
chr10	80838014	.	C	CAG	292.24	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.920;DP=765;FS=4.163;HRun=0;HaplotypeScore=150.1372;InbreedingCoeff=0.9155;MQ=64.37;MQ0=14;MQRankSum=0.519;QD=6.64;ReadPosRankSum=-1.829;VQSLOD=2.6857;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:92.49:0,92,1135	0/0:13,0:13:39.12:0,39,494	0/0:53,0:24:26.53:0,27,287	0/0:65,0:34:18.11:0,18,239	0/0:34,0:34:90.24:0,90,1112	1/1:2,23:26:18.06:301,18,0	1/1:2,15:18:6.02:100,6,0	0/0:29,0:27:54.13:0,54,636	0/0:23,0:23:45.14:0,45,572	0/0:25,0:25:63.19:0,63,792	0/0:30,0:29:63.18:0,63,786	0/0:22,0:22:57.17:0,57,707	0/0:8,0:8:21.05:0,21,252	0/0:25,0:25:51.62:0,52,634	0/0:24,0:24:48.14:0,48,596	0/0:14,0:14:36.12:0,36,458	0/0:23,0:23:51.03:0,51,572	0/0:11,0:11:23.55:0,24,250	0/0:20,0:20:45.13:0,45,547	0/0:33,0:33:81.23:0,81,998	0/0:40,0:40:69.06:0,69,1007	0/0:23,0:23:63.18:0,63,773	0/0:25,0:25:57.15:0,57,693	0/0:43,0:43:90.21:0,90,1094	0/0:23,0:23:45.13:0,45,560	0/0:33,0:33:93.29:0,93,1169	0/0:28,0:27:66.21:0,66,835	0/0:5,0:5:12.04:0,12,152
chr10	80838123	.	G	GCA	5333.63	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=-0.370;DP=683;FS=2.483;HRun=0;HaplotypeScore=139.2726;InbreedingCoeff=0.7153;MQ=69.07;MQ0=20;MQRankSum=-1.858;QD=11.80;ReadPosRankSum=0.538;VQSLOD=4.7455;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:53.71:398,54,0	1/1:4,0:4:9:89,9,0	0/0:62,0:28:38.34:0,38,365	0/0:87,0:35:17.51:0,18,347	1/1:6,21:28:9.17:95,9,0	1/1:16,0:16:15.76:174,16,0	0/1:19,0:19:7.80:127,0,8	1/1:31,0:31:83.79:711,84,0	0/0:19,0:19:47.49:0,47,435	1/1:26,2:28:63.87:662,64,0	1/1:15,1:16:9.70:44,10,0	0/0:19,0:19:47.90:0,48,448	1/1:15,0:15:32.92:221,33,0	1/1:23,0:23:47.54:347,48,0	1/1:22,1:24:8.78:173,9,0	1/1:20,0:20:6.01:64,6,0	1/1:21,1:21:15.52:206,16,0	1/1:8,1:9:19.33:151,19,0	1/1:24,0:23:53.58:448,54,0	1/1:22,0:22:11.83:92,12,0	1/1:21,1:23:6.76:157,7,0	0/1:17,0:18:23.69:24,0,248	0/0:18,0:18:35.98:0,36,329	0/0:25,0:24:51.36:0,51,410	1/1:22,0:22:34.93:270,35,0	1/1:20,0:20:37.23:417,37,0	1/1:7,19:27:30.08:412,30,0	1/1:2,4:5:3.01:52,3,0
chr10	80838128	.	C	CACAG	5646.57	PASS	AB=0.793;AC=33;AF=0.589;AN=56;BaseQRankSum=-3.822;DP=707;FS=22.563;HRun=0;HaplotypeScore=166.8945;InbreedingCoeff=0.3544;MQ=68.08;MQ0=18;MQRankSum=1.219;QD=12.20;ReadPosRankSum=1.518;VQSLOD=3.1334;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:34:21.83:348,22,0	1/1:4,0:4:9:131,9,0	0/0:55,0:23:39.63:0,40,368	0/0:80,0:32:18.80:0,19,347	0/1:27,1:30:5:123,0,5	0/1:15,0:18:44.32:136,0,44	0/1:20,0:21:82.37:114,0,82	1/1:36,0:36:88.95:736,89,0	0/0:20,0:21:53:0,53,601	1/1:6,20:28:58.36:760,58,0	1/1:4,0:20:5.85:34,6,0	0/0:18,0:20:50.42:0,50,576	0/1:11,0:15:3.57:169,0,4	1/1:16,0:21:13.19:294,13,0	0/1:3,19:25:4.60:301,0,5	0/1:2,16:20:0.95:78,0,1	1/1:6,18:23:16.77:354,17,0	1/1:9,0:9:19.45:118,19,0	1/1:26,0:25:43.89:547,44,0	0/1:3,18:24:7.67:121,0,8	0/1:7,14:25:27.85:98,0,28	0/0:18,0:24:14.27:0,14,349	0/0:18,0:19:38.98:0,39,420	0/0:25,0:24:56.62:0,57,456	1/1:22,0:25:33.36:265,33,0	0/1:20,0:21:49.80:332,0,50	1/1:29,2:31:3.36:569,3,0	1/1:4,0:4:2.97:20,3,0
chr10	80838990	.	GAC	G	413.75	PASS	AB=0.917;AC=5;AF=0.089;AN=56;BaseQRankSum=3.303;DP=427;FS=0.000;HRun=0;HaplotypeScore=58.1902;InbreedingCoeff=0.7114;MQ=70.62;MQ0=1;MQRankSum=-0.782;QD=11.49;ReadPosRankSum=-0.167;VQSLOD=3.1026;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:36.11:0,36,573	0/0:7,0:7:21.07:0,21,331	0/0:13,0:12:27.09:0,27,416	0/0:8,0:8:15.02:0,15,221	0/0:25,0:25:72.25:0,72,1193	1/1:3,12:15:21.07:265,21,0	1/1:2,8:10:21.07:265,21,0	0/0:34,1:35:40.42:0,40,1185	0/0:14,1:15:4.28:0,4,610	0/0:21,0:21:51.17:0,51,848	0/0:23,0:23:60.21:0,60,995	0/0:9,0:9:27.09:0,27,445	0/0:14,0:14:39.13:0,39,648	0/0:7,0:7:21.07:0,21,349	0/0:12,0:12:33.11:0,33,549	0/0:6,0:6:15.05:0,15,249	0/0:14,0:14:32.66:0,33,547	0/0:7,0:6:8.90:0,9,149	0/0:22,0:22:51.17:0,51,822	0/0:34,3:37:58.45:0,58,1483	0/0:5,0:5:15.05:0,15,249	0/1:10,1:11:7.77:8,0,419	0/0:14,0:14:39.13:0,39,648	0/0:5,0:5:15.05:0,15,245	0/0:17,0:17:51.17:0,51,848	0/0:23,0:23:66.23:0,66,1098	0/0:21,0:20:63.22:0,63,1046	0/0:14,0:14:42.14:0,42,697
chr10	80840886	.	CTGTGTGTGTG	C	3845.23	PASS	AB=0.831;AC=27;AF=0.519;AN=52;BaseQRankSum=5.850;DP=527;FS=47.141;HRun=0;HaplotypeScore=151.4385;InbreedingCoeff=0.5622;MQ=68.09;MQ0=13;MQRankSum=-5.012;QD=13.98;ReadPosRankSum=-0.417;VQSLOD=1.1789;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:39.11:0,39,1306	1/1:6,4:10:12.04:356,12,0	0/0:26,0:16:3.01:0,3,45	0/0:31,0:22:3.01:0,3,42	1/1:9,8:17:12.98:356,13,0	0/1:12,1:22:47.12:47,0,315	0/1:16,0:18:35.58:36,0,104	1/1:28,0:27:0.12:36,0,0	0/0:11,0:14:9.03:0,9,275	1/1:13,4:17:15.03:313,15,0	1/1:12,4:17:12.03:297,12,0	0/0:7,0:9:18.05:0,18,444	0/0:20,0:22:40:0,40,1198	0/0:15,0:15:21.07:0,21,923	1/1:21,3:23:9.02:267,9,0	1/1:8,5:13:9.03:267,9,0	./.	0/0:9,0:7:2.04:0,2,6	1/1:13,7:20:17.42:388,17,0	1/1:10,3:13:3.01:89,3,0	./.	0/0:11,0:14:21.06:0,21,601	0/0:17,0:16:18.06:0,18,815	0/0:23,0:23:30.10:0,30,1260	0/1:15,1:16:82.98:83,0,96	1/1:19,5:24:11.51:352,12,0	1/1:17,10:28:26.73:781,27,0	1/1:5,2:7:6.02:178,6,0
chr10	80841900	.	ATATCTCTC	A	456.09	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.155;DP=507;FS=0.924;HRun=0;HaplotypeScore=119.5009;InbreedingCoeff=0.9194;MQ=74.88;MQ0=15;MQRankSum=-0.367;QD=16.29;ReadPosRankSum=0.724;VQSLOD=2.5875;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:36.02:0,36,567	0/0:9,0:9:23.95:0,24,295	0/0:26,0:16:25.13:0,25,268	0/0:47,0:18:22.31:0,22,327	0/0:22,0:21:56.91:0,57,585	1/1:2,17:19:15.02:321,15,0	1/1:7,0:8:23.89:253,24,0	0/0:31,0:29:80.74:0,81,757	0/0:8,0:7:21.01:0,21,286	0/0:21,0:21:63.05:0,63,842	0/0:23,0:23:62.98:0,63,732	0/0:7,0:7:17.93:0,18,297	0/0:18,0:18:48:0,48,675	0/0:20,0:20:41.81:0,42,703	0/0:15,0:15:27.12:0,27,398	0/0:8,0:8:24.01:0,24,441	0/0:12,0:12:26.99:0,27,530	0/0:2,0:2:5.20:0,5,29	0/0:17,0:16:42.44:0,42,582	0/0:27,0:26:65.89:0,66,727	0/0:12,0:12:26.95:0,27,309	0/0:16,0:16:29.68:0,30,333	0/0:18,0:18:45.02:0,45,621	0/0:20,0:20:50.77:0,51,552	0/0:25,0:25:66.15:0,66,982	0/0:22,0:22:66.08:0,66,1232	0/0:22,0:22:51.03:0,51,1065	0/0:10,0:10:26.83:0,27,221
chr10	80841902	.	ATC	A	255.24	PASS	AB=0.980;AC=15;AF=0.300;AN=50;BaseQRankSum=1.373;DP=563;FS=7.996;HRun=0;HaplotypeScore=78.0357;InbreedingCoeff=0.3437;MQ=72.22;MQ0=17;MQRankSum=1.491;QD=1.39;ReadPosRankSum=0.775;VQSLOD=0.8277;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:23:8.15:55,0,8	0/0:9,0:9:5.97:0,6,46	./.	./.	0/1:28,0:27:8.41:8,0,81	1/1:21,0:20:8.39:41,8,0	1/1:8,0:8:2.84:14,3,0	0/0:33,0:31:5.83:0,6,33	1/1:6,3:9:5.85:46,6,0	0/0:22,0:23:20.89:0,21,164	0/0:26,0:26:9.02:0,9,109	1/1:4,4:6:9.02:97,9,0	0/0:14,0:21:11.86:0,12,118	0/0:20,0:20:12:0,12,129	0/0:24,0:24:11.99:0,12,99	0/0:9,0:9:9.01:0,9,96	0/0:12,0:13:15.01:0,15,158	0/0:5,0:5:9.83:0,10,68	0/0:19,0:18:11.91:0,12,92	0/0:27,0:29:3.64:0,4,44	0/0:13,0:13:5.72:0,6,51	1/1:10,5:15:5.60:42,6,0	0/1:16,2:18:18.88:26,0,19	0/1:24,0:24:7.73:68,0,8	0/0:27,0:27:24.02:0,24,264	0/0:22,0:21:17.75:0,18,164	0/1:19,0:28:10.91:11,0,183	./.
chr10	80842679	.	CA	C	4226.78	PASS	AB=0.875;AC=33;AF=0.611;AN=54;BaseQRankSum=0.959;DP=248;FS=1.724;HRun=9;HaplotypeScore=27.9840;InbreedingCoeff=0.7711;MQ=78.09;MQ0=0;MQRankSum=-2.179;QD=22.48;ReadPosRankSum=-0.040;VQSLOD=4.7495;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:24.07:0,24,277	1/1:0,8:8:24.01:220,24,0	0/0:8,0:8:17.99:0,18,173	0/0:11,0:8:4.60:0,5,46	1/1:1,9:10:24:220,24,0	0/0:3,0:3:3.01:0,3,33	0/0:3,0:3:6.01:0,6,65	1/1:2,22:24:65.99:594,66,0	0/0:7,0:7:18.05:0,18,208	1/1:2,7:9:18.01:165,18,0	1/1:0,9:9:24.01:220,24,0	0/0:1,0:1:3.01:0,3,35	0/0:13,0:13:27.08:0,27,312	0/0:2,0:2:6.02:0,6,69	1/1:2,6:8:18.01:165,18,0	1/1:2,2:4:6:55,6,0	1/1:2,17:19:48.02:439,48,0	1/1:0,9:9:24.01:220,24,0	1/1:0,9:9:27.01:243,27,0	1/1:2,8:10:24.01:220,24,0	1/1:0,4:4:9:82,9,0	./.	0/1:6,1:7:12.42:12,0,123	0/0:2,0:2:6.02:0,6,69	1/1:0,13:13:33.02:302,33,0	1/1:1,13:14:39.02:357,39,0	1/1:5,13:18:39.01:357,39,0	1/1:0,13:13:39.02:357,39,0
chr10	80842693	.	A	ATTCTT	92.46	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=-0.995;DP=240;FS=0.000;HRun=0;HaplotypeScore=62.7241;InbreedingCoeff=0.5539;MQ=72.71;MQ0=1;MQRankSum=-1.225;QD=23.11;ReadPosRankSum=0.029;VQSLOD=3.0643;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:24.08:0,24,502	0/0:9,0:9:27.09:0,27,559	0/0:11,0:7:17.04:0,17,151	0/0:9,0:5:2.84:0,3,21	0/0:10,0:10:30.07:0,30,551	1/1:0,2:2:3.01:93,3,0	1/1:0,2:2:3.01:93,3,0	0/0:28,0:28:78.20:0,78,1433	0/0:6,0:6:18.06:0,18,390	0/0:8,0:8:21.07:0,21,444	0/0:9,0:9:24.08:0,24,466	./.	0/0:9,0:9:27.04:0,27,499	0/0:2,0:2:6.02:0,6,130	0/0:6,0:6:18.06:0,18,373	0/0:2,0:2:6.02:0,6,125	0/0:18,0:18:51.16:0,51,1008	0/0:12,0:12:17.93:0,18,461	0/0:13,0:13:33.09:0,33,615	0/0:8,0:8:24.07:0,24,466	0/0:4,0:4:9.03:0,9,187	./.	0/0:5,0:5:15.05:0,15,322	0/0:2,0:2:6.02:0,6,130	0/0:13,0:13:36.12:0,36,714	0/0:15,0:15:39.11:0,39,753	0/0:14,0:14:42.13:0,42,805	0/0:13,0:13:39.13:0,39,788
chr10	80847125	.	G	GA	1556.35	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.545;DP=608;FS=9.208;HRun=0;HaplotypeScore=59.4719;InbreedingCoeff=0.9951;MQ=82.58;MQ0=0;MQRankSum=1.457;QD=37.96;ReadPosRankSum=1.768;VQSLOD=3.5557;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1430	0/0:9,0:9:27.09:0,27,377	0/0:25,0:25:57.22:0,57,874	0/0:19,0:18:51.09:0,51,662	0/0:23,0:23:63.12:0,63,818	1/1:0,20:20:54.18:863,54,0	1/1:0,21:21:51.17:815,51,0	0/0:23,0:23:69.22:0,69,936	0/0:26,0:26:78.23:0,78,1056	0/0:20,0:19:60.20:0,60,838	0/0:11,0:11:33.03:0,33,400	0/0:15,0:15:45.15:0,45,629	0/0:23,0:23:69.23:0,69,963	0/0:30,0:30:90.13:0,90,1230	0/0:25,0:25:75.24:0,75,1030	0/0:29,0:29:84.27:0,84,1157	0/0:22,0:21:66.22:0,66,922	0/0:12,0:12:36.09:0,36,477	0/0:25,0:25:75.22:0,75,1014	0/0:24,0:24:69.16:0,69,924	0/0:35,0:35:99:0,105,1430	0/0:18,0:18:51.15:0,51,694	0/0:23,0:23:69.19:0,69,926	0/0:21,0:21:60.20:0,60,839	0/0:15,0:15:45.08:0,45,570	0/0:17,0:17:51.17:0,51,713	0/0:34,0:34:99:0,99,1349	0/0:6,0:6:18.06:0,18,252
chr10	80847606	.	G	GA	3849.53	PASS	AB=0.616;AC=28;AF=0.500;AN=56;BaseQRankSum=-10.130;DP=379;FS=9.356;HRun=10;HaplotypeScore=42.7359;InbreedingCoeff=0.7035;MQ=75.10;MQ0=0;MQRankSum=1.802;QD=20.59;ReadPosRankSum=-0.504;VQSLOD=3.8672;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,123,1005	1/1:0,4:4:12.03:127,12,0	0/0:14,0:13:17.19:0,17,119	0/0:15,0:15:14.85:0,15,114	0/1:6,8:14:0.58:200,0,1	0/0:1,0:11:20.37:0,20,59	0/0:0,0:25:46.85:0,47,136	1/1:5,14:19:36.07:370,36,0	0/0:9,0:9:23.96:0,24,197	1/1:4,10:14:20.61:307,21,0	0/1:2,3:5:12.61:84,0,13	0/0:9,0:9:26.97:0,27,222	0/0:7,0:7:20.97:0,21,172	0/0:14,0:14:35.96:0,36,296	1/1:2,8:10:18.05:192,18,0	1/1:3,2:6:5.85:46,6,0	1/1:4,18:22:29.49:519,29,0	1/1:3,9:13:5.28:246,5,0	1/1:1,12:13:35.92:365,36,0	1/1:1,6:7:18.05:192,18,0	1/1:3,21:25:53.93:557,54,0	0/0:6,0:6:14.98:0,15,123	0/0:14,0:14:38.95:0,39,320	0/0:17,0:17:35.93:0,36,295	0/1:3,5:8:52.88:107,0,53	1/1:2,11:13:33.05:334,33,0	0/1:3,7:10:3.59:171,0,4	1/1:0,3:3:3.01:32,3,0
chr10	80849157	.	G	GCATTTTGGTC	2539.06	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.862;DP=757;FS=14.087;HRun=0;HaplotypeScore=177.4910;InbreedingCoeff=0.8693;MQ=50.07;MQ0=69;MQRankSum=-7.219;QD=101.56;ReadPosRankSum=0.395;VQSLOD=3.1352;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:45.88:0,46,1878	0/0:12,0:12:33.11:0,33,981	0/0:35,0:1:2.98:0,3,22	0/0:38,0:4:6.02:0,6,145	0/0:36,0:36:78.27:0,78,2356	1/1:4,12:13:33.11:1696,33,0	1/1:7,2:8:21.07:964,21,0	0/0:34,0:21:54.13:0,54,1434	0/0:22,0:22:60.21:0,60,1805	0/0:42,0:41:99:0,114,3196	0/0:23,0:23:60.19:0,60,1762	0/0:32,0:32:69.24:0,69,1941	0/0:28,0:28:62.96:0,63,1694	0/0:28,0:27:51.17:0,51,1499	0/0:33,0:33:81.28:0,81,2395	0/0:26,0:26:54.13:0,54,1520	0/0:27,0:27:65.02:0,65,2303	0/0:20,0:19:44.99:0,45,1383	0/0:22,0:10:30.10:0,30,945	0/0:35,0:35:81.28:0,81,2501	0/0:29,0:28:72.23:0,72,2182	0/0:31,0:31:69.23:0,69,2003	0/0:28,0:28:69.24:0,69,2045	0/0:23,0:23:57.20:0,57,1721	0/0:22,0:21:51.16:0,51,1480	0/0:31,0:28:81.28:0,81,2552	0/0:29,0:29:72.11:0,72,1961	0/0:13,0:13:27.06:0,27,639
chr10	80852084	.	A	AGC	385.92	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=0.012;DP=438;FS=2.722;HRun=0;HaplotypeScore=80.1622;InbreedingCoeff=0.7739;MQ=71.20;MQ0=0;MQRankSum=-3.669;QD=9.19;ReadPosRankSum=-3.506;VQSLOD=2.3081;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:48:0,48,592	0/1:8,0:8:4.05:4,0,119	0/0:23,0:20:51.11:0,51,647	0/0:17,0:14:33.04:0,33,452	0/0:24,0:24:58.26:0,58,503	1/1:7,8:16:16.19:161,16,0	1/1:10,8:18:23.91:342,24,0	0/0:19,0:19:25.76:0,26,230	0/0:15,0:15:42.10:0,42,576	0/0:16,0:16:9.82:0,10,184	0/0:17,0:17:45.26:0,45,401	0/0:8,0:8:21.07:0,21,296	0/0:11,0:11:20.99:0,21,196	0/0:18,0:18:26.92:0,27,254	0/0:12,0:12:30.36:0,30,237	0/0:16,0:16:41.19:0,41,321	0/0:31,0:31:83.93:0,84,647	0/0:11,0:11:26.23:0,26,201	0/0:10,0:10:18.34:0,18,116	0/0:13,0:13:10.03:0,10,263	0/0:23,0:23:60.70:0,61,478	0/0:8,0:7:18.06:0,18,263	0/0:13,0:13:36.11:0,36,505	0/0:6,0:6:15.05:0,15,219	0/0:11,0:11:25.71:0,26,195	0/0:21,0:21:26.20:0,26,366	0/0:25,0:25:51.77:0,52,498	0/0:8,0:8:23.84:0,24,176
chr10	80852087	.	A	AC	855.53	PASS	AB=0.882;AC=11;AF=0.196;AN=56;BaseQRankSum=-3.423;DP=433;FS=0.585;HRun=9;HaplotypeScore=66.9608;InbreedingCoeff=0.6592;MQ=76.12;MQ0=0;MQRankSum=-2.255;QD=7.44;ReadPosRankSum=-1.874;VQSLOD=1.0430;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,11:20:45.26:212,0,45	0/0:7,0:7:18:0,18,156	0/0:24,1:21:37.67:0,38,251	0/0:20,0:18:13.60:0,14,138	0/0:23,0:23:55.58:0,56,441	1/1:14,0:14:17.95:125,18,0	1/1:17,0:17:28.85:171,29,0	0/1:18,0:18:3.13:3,0,195	0/0:16,0:16:41.98:0,42,362	0/1:16,0:16:80.18:80,0,191	0/0:18,0:18:47.73:0,48,394	0/0:7,0:7:14.98:0,15,130	1/1:1,10:11:18.05:199,18,0	1/1:2,17:19:21.06:232,21,0	0/0:12,0:12:29.79:0,30,256	0/0:16,0:16:12.91:0,13,331	0/0:30,0:30:80.01:0,80,681	0/0:10,0:10:23.99:0,24,208	0/0:8,0:8:19.40:0,19,144	0/0:12,0:12:13.42:0,13,263	0/0:24,0:24:59.70:0,60,499	0/0:7,0:6:11.99:0,12,104	0/0:13,0:13:29.97:0,30,260	0/0:6,0:6:18:0,18,156	0/0:11,0:11:23.99:0,24,208	0/0:21,0:21:47.98:0,48,415	0/0:23,0:23:33.04:0,33,508	0/0:9,0:9:23.94:0,24,197
chr10	80852342	.	GTTTGTTTTTTT	G	7229.16	PASS	AB=0.781;AC=29;AF=0.518;AN=56;BaseQRankSum=5.567;DP=538;FS=11.138;HRun=0;HaplotypeScore=157.1817;InbreedingCoeff=0.4520;MQ=50.35;MQ0=38;MQRankSum=-2.530;QD=23.24;ReadPosRankSum=-0.129;VQSLOD=3.4987;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:20.69:0,21,387	1/1:2,5:6:2.78:94,3,0	0/0:45,0:9:10.93:0,11,68	0/0:71,0:8:3.41:0,3,72	1/1:7,22:27:55.42:1001,55,0	0/1:8,0:11:15.45:15,0,423	0/1:5,0:8:28.85:29,0,63	1/1:20,0:19:26.49:360,26,0	0/0:11,0:11:27.05:0,27,795	1/1:6,26:30:57.60:1337,58,0	1/1:6,18:24:41.68:738,42,0	0/0:5,0:5:12.04:0,12,353	0/0:19,0:19:20.95:0,21,957	0/0:11,0:10:0.50:0,0,76	0/1:4,8:12:51.13:267,0,51	1/1:4,11:14:16.49:463,16,0	0/1:7,10:17:35.31:85,0,35	0/1:14,0:14:4.28:171,0,4	1/1:7,14:19:44.08:659,44,0	1/1:4,16:20:33.06:604,33,0	1/1:9,3:7:3.01:94,3,0	0/0:16,0:13:30.06:0,30,1157	0/0:22,0:21:57.12:0,57,1580	0/0:15,0:15:32.53:0,33,1125	0/1:7,9:16:0.20:181,0,0	1/1:7,11:14:30.01:547,30,0	1/1:6,17:22:15.04:367,15,0	0/1:10,0:10:4.57:218,0,5
chr10	80852346	.	GT	G	1081.61	PASS	AB=0.933;AC=25;AF=0.446;AN=56;BaseQRankSum=7.460;DP=528;FS=12.513;HRun=10;HaplotypeScore=109.8272;InbreedingCoeff=-0.0819;MQ=51.06;MQ0=39;MQRankSum=-4.670;QD=2.96;ReadPosRankSum=3.667;VQSLOD=-0.2842;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,7:10:15.55:134,16,0	1/1:6,0:5:1.90:6,2,0	0/1:49,1:8:12.94:18,0,13	0/0:72,0:9:8.23:0,8,101	0/1:29,0:27:48.16:98,0,48	0/0:8,0:11:13.98:0,14,82	0/0:6,0:9:13.14:0,13,69	1/1:11,6:17:5.23:135,5,0	0/0:11,0:11:26.87:0,27,264	0/1:32,0:30:70.84:131,0,71	0/1:22,0:24:16.99:90,0,17	0/0:4,0:4:12.01:0,12,115	0/1:4,15:19:2.59:213,0,3	1/1:3,8:10:5.91:51,6,0	0/1:9,0:9:22.98:25,0,23	0/1:14,0:14:2.03:47,0,2	0/1:15,0:16:23.19:23,0,24	0/1:11,3:14:11.97:12,0,53	0/1:20,1:18:15.95:76,0,16	0/1:18,0:19:13.57:75,0,14	0/1:10,0:5:13.39:13,0,14	0/0:16,0:13:30.08:0,30,332	0/0:23,0:22:58.91:0,59,600	0/0:14,0:14:31.90:0,32,329	1/1:14,0:14:7.04:32,7,0	0/1:14,0:14:5.93:6,0,49	0/1:21,0:21:12.17:28,0,12	0/1:4,5:10:35.16:35,0,47
chr10	80852356	.	TG	T	1677.97	PASS	AB=0.952;AC=35;AF=0.625;AN=56;BaseQRankSum=9.602;DP=524;FS=0.979;HRun=1;HaplotypeScore=111.0024;InbreedingCoeff=0.0934;MQ=56.19;MQ0=34;MQRankSum=-5.360;QD=3.69;ReadPosRankSum=5.757;VQSLOD=0.3213;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,1:11:0.96:56,0,1	1/1:5,0:5:2.82:19,3,0	0/1:49,9:10:18.41:36,0,18	0/1:70,4:12:18.30:18,0,52	0/1:29,0:27:64.14:159,0,64	1/1:11,1:10:21.46:107,21,0	1/1:10,0:10:19.78:110,20,0	0/1:19,0:17:53.10:63,0,53	0/0:11,0:11:26.70:0,27,180	1/1:30,1:29:6.68:238,7,0	1/1:22,0:22:1.91:155,2,0	0/0:4,0:4:7.75:0,8,49	1/1:18,1:19:4.91:92,5,0	1/1:10,0:9:0.35:19,0,0	0/1:10,0:10:32.07:39,0,32	1/1:14,0:13:11.48:84,11,0	0/1:15,1:16:39.12:39,0,52	0/1:15,2:16:5.16:5,0,117	0/1:18,0:16:7.97:139,0,8	1/1:18,0:18:31.46:180,31,0	0/1:8,0:5:10.57:13,0,11	0/0:15,0:12:32.89:0,33,305	0/0:24,0:23:37.82:0,38,405	0/0:15,0:15:24.05:0,24,217	1/1:11,0:11:8.71:52,9,0	1/1:14,0:13:6.96:113,7,0	1/1:19,0:19:14.48:88,14,0	0/1:9,1:10:23.26:25,0,23
chr10	80852357	.	GT	G	56.01	PASS	AB=0.965;AC=19;AF=0.339;AN=56;BaseQRankSum=8.417;DP=528;FS=4.658;HRun=15;HaplotypeScore=118.2465;InbreedingCoeff=0.0262;MQ=56.08;MQ0=34;MQRankSum=-6.180;QD=0.17;ReadPosRankSum=6.529;VQSLOD=-0.0666;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,1:11:2.50:3,0,86	1/1:5,0:5:1.90:6,2,0	0/1:59,0:10:10.09:10,0,19	0/1:73,0:13:5.45:5,0,49	0/0:29,0:27:4.60:0,5,117	0/0:12,0:10:20.63:0,21,91	0/0:10,0:10:13.29:0,13,67	0/0:21,0:19:36.38:0,36,163	0/0:9,1:11:7.79:0,8,155	0/1:31,0:29:19.29:19,0,31	0/1:22,0:22:2.91:3,0,34	0/1:3,1:4:10.32:10,0,36	0/0:19,0:19:28.21:0,28,187	0/0:10,0:9:5.97:0,6,36	0/1:10,0:10:5.57:6,0,7	0/1:13,0:13:5.24:20,0,5	0/1:15,1:16:20.43:28,0,20	0/0:17,0:16:7.14:0,7,109	0/1:17,1:16:14.69:15,0,41	0/1:18,0:18:8.78:9,0,10	0/1:9,0:6:0.28:0,0,15	0/0:14,0:12:27.26:0,27,213	0/0:22,0:23:50.44:0,50,401	0/0:14,0:15:9.87:0,10,153	1/1:10,1:11:6.91:26,7,0	0/1:14,0:13:3.08:12,0,3	1/1:18,0:19:9.01:34,9,0	0/0:11,0:11:8.48:0,8,41
chr10	80852363	.	T	TTTG	457.37	PASS	AB=0.852;AC=5;AF=0.089;AN=56;BaseQRankSum=1.397;DP=525;FS=0.899;HRun=0;HaplotypeScore=133.7904;InbreedingCoeff=0.0156;MQ=57.12;MQ0=32;MQRankSum=-1.083;QD=4.08;ReadPosRankSum=0.039;VQSLOD=2.7109;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:29.26:0,29,355	0/0:5,0:5:2.99:0,3,24	0/0:51,0:11:10.98:0,11,108	0/1:61,0:11:15.78:16,0,79	0/0:31,0:29:68.76:0,69,707	0/1:6,6:10:3.82:331,0,4	0/1:4,6:11:19.29:207,0,19	0/0:23,0:21:53.97:0,54,610	0/0:11,0:11:29.88:0,30,322	0/0:36,0:35:68.92:0,69,648	0/0:23,0:23:45.82:0,46,431	0/0:4,0:4:11.95:0,12,122	0/0:18,0:18:36.11:0,36,528	0/0:11,0:10:11.94:0,12,132	0/0:10,0:10:15:0,15,149	0/0:14,0:13:14.37:0,14,141	0/1:16,0:16:4.33:4,0,128	0/0:18,0:17:35.31:0,35,394	0/0:21,0:19:32.87:0,33,327	0/0:18,0:18:27.14:0,27,222	0/0:9,0:6:6:0,6,64	0/0:15,0:12:32.97:0,33,365	0/0:22,0:21:57.07:0,57,751	0/0:16,0:16:35.36:0,35,391	0/1:11,0:11:1.53:2,0,40	0/0:15,0:15:30:0,30,228	0/0:20,0:20:12.42:0,12,111	0/0:8,0:8:14.85:0,15,149
chr10	80852962	.	G	GT	694.55	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=0.019;DP=491;FS=12.307;HRun=10;HaplotypeScore=74.7081;InbreedingCoeff=0.6633;MQ=66.84;MQ0=0;MQRankSum=-2.211;QD=16.54;ReadPosRankSum=-0.341;VQSLOD=2.9062;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:38:75.74:0,76,687	0/0:8,0:8:17.98:0,18,148	0/0:10,0:10:20.76:0,21,155	0/1:10,0:8:3.52:4,0,38	0/0:21,0:21:50.92:0,51,417	1/1:3,19:22:57.14:608,57,0	1/1:5,5:10:3.78:195,4,0	0/0:33,0:33:65.89:0,66,543	0/0:18,0:18:46.98:0,47,375	0/0:27,0:27:35.87:0,36,410	0/0:14,1:15:26.95:0,27,226	0/0:13,0:13:32.92:0,33,265	0/0:15,0:15:35.94:0,36,296	0/0:23,0:24:52.94:0,53,421	0/0:8,0:9:14.01:0,14,109	0/0:16,0:16:39.41:0,39,325	0/0:23,0:23:49.96:0,50,399	0/0:12,0:12:29.97:0,30,251	0/0:13,1:14:0.97:0,1,214	0/0:16,0:17:35.90:0,36,296	0/0:7,0:8:20.20:0,20,154	0/0:15,0:16:37.97:0,38,299	0/0:22,1:23:30.91:0,31,458	0/0:11,0:11:32.92:0,33,265	0/0:18,0:18:41.91:0,42,343	0/0:21,0:22:58.96:0,59,473	0/0:28,0:28:71.93:0,72,600	0/0:9,0:9:26.91:0,27,215
chr10	80853000	.	GT	G	347.94	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.052;DP=505;FS=6.853;HRun=10;HaplotypeScore=120.9248;InbreedingCoeff=0.9283;MQ=63.92;MQ0=3;MQRankSum=-1.180;QD=15.82;ReadPosRankSum=-3.327;VQSLOD=2.2554;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:79.28:0,79,334	0/0:6,0:6:10.78:0,11,44	0/0:24,0:16:14.80:0,15,234	0/0:16,0:12:18.15:0,18,156	0/0:20,0:19:48.82:0,49,209	1/1:2,13:15:41.97:361,42,0	1/1:3,4:7:11.98:104,12,0	0/0:22,0:22:35.94:0,36,171	0/0:22,0:22:48.12:0,48,523	0/0:18,0:17:28.87:0,29,135	0/0:17,0:17:28.12:0,28,139	0/0:16,0:16:48.10:0,48,518	0/0:18,0:18:29.53:0,30,122	0/0:25,0:25:56.31:0,56,232	0/0:11,0:11:23.64:0,24,114	0/0:18,0:18:39.37:0,39,171	0/0:16,0:16:37.50:0,37,153	0/0:11,0:11:17.26:0,17,90	0/0:17,0:17:40.49:0,40,170	0/0:22,1:23:39.93:0,40,210	0/0:6,0:5:13.67:0,14,63	0/0:16,0:16:45.11:0,45,489	0/0:22,0:25:62.82:0,63,651	0/0:17,0:17:44.92:0,45,460	0/0:15,0:15:34.82:0,35,152	0/0:22,0:22:53.75:0,54,222	0/0:32,0:32:60.25:0,60,273	0/0:9,0:9:16.26:0,16,69
chr10	80853008	.	T	TG	12018.29	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-5.455;DP=522;FS=9.333;HRun=0;HaplotypeScore=88.3470;InbreedingCoeff=0.9891;MQ=57.58;MQ0=8;MQRankSum=-2.521;QD=33.95;ReadPosRankSum=1.614;VQSLOD=3.6818;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:39:96.28:1302,96,0	1/1:1,4:5:12.51:167,13,0	0/0:25,0:13:32.51:0,33,339	0/0:23,0:12:28.18:0,28,260	1/1:3,20:23:53.15:734,53,0	0/0:16,0:16:35.41:0,35,217	0/0:7,0:7:15.64:0,16,96	1/1:3,19:22:48.34:720,48,0	0/0:18,0:18:51.15:0,51,674	1/1:3,15:17:53.68:657,54,0	1/1:5,15:20:51:620,51,0	0/0:18,0:18:54.09:0,54,693	1/1:0,16:16:33.11:459,33,0	1/1:0,27:27:63.21:877,63,0	1/1:2,9:11:33.04:422,33,0	1/1:2,18:20:52.41:703,52,0	1/1:1,16:17:38.18:576,38,0	1/1:3,8:11:24.89:285,25,0	1/1:3,16:17:49.38:641,49,0	1/1:4,20:24:69.07:887,69,0	1/1:1,5:5:14.98:184,15,0	0/0:19,0:19:48.14:0,48,650	0/0:24,0:24:53.82:0,54,803	0/0:18,0:18:45.11:0,45,606	1/1:2,14:16:45.62:612,46,0	1/1:0,21:21:60.19:829,60,0	1/1:3,28:31:84.17:1115,84,0	1/1:2,5:7:18.03:229,18,0
chr10	80853022	.	G	GTTTGT	9194.94	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-1.043;DP=535;FS=4.983;HRun=0;HaplotypeScore=133.6985;InbreedingCoeff=0.8432;MQ=54.43;MQ0=13;MQRankSum=-6.563;QD=33.44;ReadPosRankSum=-2.159;VQSLOD=3.7213;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:56.82:0,57,945	1/1:1,1:5:12.04:250,12,0	0/0:32,0:15:2.91:0,3,36	0/0:29,0:13:11.16:0,11,155	1/1:10,7:21:33.11:812,33,0	0/0:4,0:14:21.06:0,21,245	0/0:3,0:5:12.03:0,12,138	1/1:27,0:29:0.18:251,0,0	0/0:19,0:19:51.16:0,51,851	1/1:5,10:16:33.11:804,33,0	1/1:6,6:17:33.11:873,33,0	0/0:15,0:15:33.08:0,33,573	0/0:17,0:17:27.09:0,27,456	0/0:25,0:25:45.08:0,45,722	1/1:3,10:13:21.07:595,21,0	1/1:11,4:18:24.08:627,24,0	1/1:12,1:15:15.04:280,15,0	1/1:9,0:9:0.89:2,1,0	1/1:15,4:15:18.06:510,18,0	1/1:6,18:25:54.15:1275,54,0	1/1:4,1:6:12.03:233,12,0	0/0:20,0:20:39.12:0,39,649	0/0:23,0:23:45.15:0,45,788	0/0:18,0:18:33.11:0,33,569	1/1:8,6:18:27.09:675,27,0	1/1:11,8:20:30.09:747,30,0	1/1:17,8:31:2.30:1176,2,0	1/1:5,2:7:3.01:85,3,0
chr10	80853151	.	T	TTATC	2569.58	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-4.854;DP=477;FS=2.877;HRun=0;HaplotypeScore=79.3447;InbreedingCoeff=0.5623;MQ=67.15;MQ0=4;MQRankSum=3.407;QD=24.95;ReadPosRankSum=-1.654;VQSLOD=3.0021;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,11:30:44.39:1156,44,0	0/0:5,0:5:9.03:0,9,143	0/0:19,0:14:0.44:0,0,67	0/1:13,0:10:4.99:5,0,58	0/0:23,0:23:33.09:0,33,484	0/0:1,0:12:14.96:0,15,130	0/1:6,0:6:9.68:18,0,10	0/0:37,0:37:51.10:0,51,664	0/0:18,0:18:27.09:0,27,432	0/0:31,0:31:63.20:0,63,946	0/0:21,0:21:48.16:0,48,764	0/0:17,0:17:48.12:0,48,741	1/1:3,15:18:27.09:650,27,0	1/1:5,14:20:36.12:866,36,0	0/0:13,0:13:24.08:0,24,384	0/0:14,0:14:27.07:0,27,390	0/1:16,0:16:29.02:29,0,265	0/0:5,0:4:9.03:0,9,144	0/0:10,0:10:18.06:0,18,286	0/0:18,0:18:15.05:0,15,238	0/0:18,0:18:33.11:0,33,526	0/0:10,0:10:18.06:0,18,288	0/0:14,0:14:33.08:0,33,461	0/0:6,0:6:12.03:0,12,171	0/0:18,0:18:30.06:0,30,453	0/0:18,0:18:39.08:0,39,556	0/0:25,0:25:57.17:0,57,870	0/0:22,0:21:51.15:0,51,770
chr10	80855491	.	GT	G	7512.71	PASS	AB=0.938;AC=37;AF=0.661;AN=56;BaseQRankSum=12.418;DP=585;FS=2.425;HRun=10;HaplotypeScore=64.3481;InbreedingCoeff=0.9034;MQ=74.47;MQ0=1;MQRankSum=-4.657;QD=18.78;ReadPosRankSum=1.526;VQSLOD=5.8772;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.11:0,60,641	1/1:3,10:13:26.90:234,27,0	0/1:14,1:15:13.83:14,0,159	0/0:14,1:15:5.07:0,5,252	1/1:2,19:22:53.01:449,53,0	1/1:1,0:26:48.89:143,49,0	1/1:0,0:18:32.59:95,33,0	1/1:2,19:21:56.86:472,57,0	0/0:22,0:22:66.10:0,66,706	1/1:1,24:25:71.95:618,72,0	1/1:2,16:18:44.98:390,45,0	0/0:15,0:15:42.11:0,42,457	0/0:32,0:32:90.23:0,90,986	0/0:18,0:18:51.13:0,51,557	1/1:1,22:23:56.99:495,57,0	1/1:1,10:11:26.99:234,27,0	1/1:4,10:14:29.97:260,30,0	1/1:1,13:14:35.99:313,36,0	1/1:5,15:20:44.93:378,45,0	1/1:5,24:29:71.92:614,72,0	1/1:3,23:26:36.96:495,37,0	0/0:22,0:22:54.14:0,54,590	0/0:17,2:19:25.05:0,25,504	0/0:20,0:20:54.15:0,54,596	1/1:1,22:23:56.99:495,57,0	1/1:1,23:24:59.75:587,60,0	1/1:1,32:33:92.97:807,93,0	1/1:7,17:24:48.43:417,48,0
chr10	80855951	.	AC	A	455.20	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.171;DP=417;FS=5.392;HRun=9;HaplotypeScore=44.5752;InbreedingCoeff=0.8454;MQ=75.73;MQ0=0;MQRankSum=-2.880;QD=18.21;ReadPosRankSum=-2.824;VQSLOD=2.6417;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:69.20:0,69,796	0/0:4,0:4:12.04:0,12,138	0/0:17,1:19:8.40:0,8,377	0/0:18,0:17:8.49:0,8,283	0/0:11,0:11:30.09:0,30,346	1/1:2,10:12:30.02:274,30,0	1/1:0,13:13:33.02:302,33,0	0/0:23,0:23:34.28:0,34,339	0/0:17,0:17:51.15:0,51,589	0/0:15,0:15:39.12:0,39,449	0/0:15,0:15:42.07:0,42,460	0/0:11,0:11:24.07:0,24,274	0/0:7,0:7:21.06:0,21,242	0/0:13,0:13:36.57:0,37,409	0/0:14,0:14:42.11:0,42,475	0/0:11,0:11:30.09:0,30,346	0/0:19,0:19:48.14:0,48,554	0/0:14,0:14:42.11:0,42,475	0/0:7,0:9:20.86:0,21,200	0/0:14,0:14:33.10:0,33,381	0/0:20,0:20:48.11:0,48,538	0/0:17,0:17:42.12:0,42,484	0/0:16,0:16:42.11:0,42,475	0/0:20,0:20:54.13:0,54,603	0/0:11,1:12:5.63:0,6,319	0/0:16,0:16:42.11:0,42,474	0/0:22,0:21:57.17:0,57,658	0/0:4,0:4:9.01:0,9,94
chr10	80856655	.	A	ACCTTTCC	32119.21	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=16.702;DP=656;FS=3.513;HRun=0;HaplotypeScore=184.3435;InbreedingCoeff=0.9958;MQ=79.25;MQ0=1;MQRankSum=-18.164;QD=88.97;ReadPosRankSum=-1.055;VQSLOD=5.3831;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,117,2755	1/1:1,4:7:14.33:532,14,0	0/0:40,0:38:81.31:0,81,1844	0/0:23,0:21:37.46:0,37,769	1/1:5,17:22:54.09:1594,54,0	0/0:13,0:13:33.09:0,33,763	0/0:21,0:21:60.17:0,60,1451	1/1:22,8:33:96.26:3110,96,0	0/0:20,0:20:57.20:0,57,1479	1/1:6,15:25:69.24:2540,69,0	1/1:5,18:28:69.24:2575,69,0	0/0:23,0:23:69.24:0,69,1791	0/0:23,0:23:69.24:0,69,1746	0/0:19,0:19:54.15:0,54,1249	1/1:8,24:36:84.29:3262,84,0	1/1:10,10:20:57.20:2133,57,0	1/1:8,10:21:42.14:1623,42,0	1/1:6,4:10:27.09:1002,27,0	1/1:4,2:9:24.08:707,24,0	1/1:6,17:26:75.25:2316,75,0	1/1:16,6:24:48.12:1702,48,0	0/0:30,0:30:81.26:0,81,2051	0/0:23,0:23:66.23:0,66,1625	0/0:15,0:15:39.09:0,39,949	1/1:7,20:29:75.26:2793,75,0	1/1:12,15:32:87.27:2827,87,0	1/1:8,19:28:75.26:2728,75,0	1/1:3,5:8:18.06:676,18,0
chr10	80857237	.	T	TAAA	12586.50	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-5.229;DP=578;FS=4.569;HRun=9;HaplotypeScore=84.1156;InbreedingCoeff=0.9837;MQ=60.96;MQ0=0;MQRankSum=-1.756;QD=32.61;ReadPosRankSum=-2.123;VQSLOD=3.8362;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:19.91:0,20,559	1/1:3,5:9:15.03:260,15,0	0/0:20,0:15:23.83:0,24,270	0/0:12,0:10:10.90:0,11,167	1/1:8,24:33:67.56:1090,68,0	1/1:2,0:28:63.98:482,64,0	1/1:3,1:16:28.16:246,28,0	1/1:5,18:26:54.13:926,54,0	0/0:19,0:20:49.69:0,50,624	1/1:6,22:29:75.12:1193,75,0	1/1:7,22:31:60.08:1032,60,0	0/0:22,0:22:66.20:0,66,820	0/0:15,0:16:37.67:0,38,490	0/0:17,0:17:48.13:0,48,606	1/1:2,19:22:42.10:756,42,0	1/1:3,10:15:24.08:457,24,0	1/1:5,13:22:39.08:663,39,0	1/1:3,4:8:21.06:346,21,0	1/1:3,12:19:51.15:894,51,0	1/1:5,23:33:75.93:1273,76,0	1/1:2,5:8:18.06:339,18,0	0/0:24,0:24:42.29:0,42,703	0/0:26,0:26:54.75:0,55,723	0/0:13,0:13:33.10:0,33,416	1/1:7,14:21:30.09:556,30,0	1/1:3,19:23:60.18:1083,60,0	1/1:4,24:29:39.13:753,39,0	1/1:1,10:11:12.04:237,12,0
chr10	80860435	.	A	AT	411.92	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.787;DP=657;FS=3.622;HRun=6;HaplotypeScore=59.2873;InbreedingCoeff=0.8935;MQ=56.05;MQ0=29;MQRankSum=-0.247;QD=15.26;ReadPosRankSum=1.222;VQSLOD=3.2182;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:39.08:0,39,398	0/0:14,0:14:39.09:0,39,398	0/0:13,2:5:6.01:0,6,60	0/0:12,0:6:8.89:0,9,75	0/0:41,0:40:99:0,99,1001	1/1:0,16:16:30.10:377,30,0	1/1:2,9:9:12.04:151,12,0	0/0:41,0:19:20.43:0,20,315	0/0:13,0:13:33.08:0,33,337	0/0:33,0:32:75.14:0,75,755	0/0:37,0:37:72.14:0,72,727	0/0:17,0:16:36.07:0,36,367	0/0:20,0:20:54.11:0,54,544	0/0:28,0:28:75.17:0,75,765	0/0:26,0:26:72.13:0,72,724	0/0:22,0:22:54.12:0,54,551	0/0:21,0:19:48.11:0,48,490	0/0:24,0:22:54.12:0,54,551	0/0:13,0:8:21.05:0,21,214	0/0:34,0:33:90.13:0,90,901	0/0:21,0:21:54.12:0,54,551	0/0:34,0:34:84.18:0,84,850	0/0:24,0:24:63.14:0,63,643	0/0:15,0:15:39.09:0,39,398	0/0:25,0:25:53.67:0,54,546	0/0:28,0:27:72.15:0,72,730	0/0:41,0:40:99:0,108,1088	0/0:8,0:7:15.03:0,15,153
chr10	80861808	.	CGCCTCTATACCAAGGCTTTCAACTTCACTAACCTCTCG	C	577.53	PASS	AB=0.811;AC=7;AF=0.175;AN=40;BaseQRankSum=6.799;DP=701;FS=0.939;HRun=0;HaplotypeScore=222.1097;InbreedingCoeff=0.2432;MQ=32.05;MQ0=126;MQRankSum=-5.795;QD=3.82;ReadPosRankSum=2.587;VQSLOD=2.4568;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:40:27.09:0,27,4342	0/0:8,0:6:3.01:0,3,55	./.	./.	0/0:28,0:13:3.01:0,3,55	0/0:36,0:20:9.03:0,9,1091	0/0:28,0:17:19.31:0,19,1533	0/1:39,0:20:31.04:92,0,31	0/0:20,0:20:20.79:0,21,3328	0/1:18,12:19:99:161,0,644	./.	0/0:30,0:28:33.11:0,33,5462	0/0:28,0:19:17.72:0,18,3031	0/0:31,0:25:27.09:0,27,4460	0/0:8,12:13:3.01:0,3,224	./.	0/0:16,0:12:1.25:0,1,3	./.	1/1:12,4:6:12.01:200,12,0	./.	./.	0/0:35,0:28:30.06:0,30,4834	0/0:32,0:27:20.82:0,21,2883	0/0:25,0:23:21.07:0,21,3409	./.	0/1:17,11:18:99:220,0,937	1/1:19,19:27:2.98:21,3,0	0/0:3,0:3:3.01:0,3,394
chr10	80861833	.	TCACTAAC	T	219.98	PASS	AB=0.941;AC=6;AF=0.158;AN=38;BaseQRankSum=5.540;DP=653;FS=4.043;HRun=0;HaplotypeScore=75.4611;InbreedingCoeff=0.0047;MQ=31.50;MQ0=142;MQRankSum=-3.958;QD=1.85;ReadPosRankSum=-0.528;VQSLOD=0.6881;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:68,0:48:48.12:0,48,1758	0/0:7,0:4:3.01:0,3,55	./.	./.	0/0:20,0:7:3.01:0,3,55	0/0:31,0:17:18.06:0,18,719	0/0:30,0:20:29.60:0,30,1051	0/1:20,9:10:31.04:92,0,31	0/0:24,0:22:33.11:0,33,1284	0/1:23,0:16:81.89:82,0,406	./.	0/0:26,0:24:39.12:0,39,1582	0/0:27,0:21:30.10:0,30,1208	0/0:27,0:22:36.12:0,36,1455	0/0:18,0:11:3.01:0,3,122	./.	./.	./.	0/1:9,0:4:47.66:62,0,48	./.	./.	0/0:39,0:33:38.79:0,39,1595	0/0:32,0:28:20.15:0,20,859	0/0:23,0:20:24.08:0,24,970	./.	0/1:25,0:12:71.90:72,0,423	1/1:33,0:22:2.98:21,3,0	0/0:5,0:3:3.01:0,3,123
chr10	80862772	.	CCTCTCTCTCT	C	274.96	PASS	AB=0.833;AC=5;AF=0.093;AN=54;BaseQRankSum=4.645;DP=479;FS=0.000;HRun=0;HaplotypeScore=117.8263;InbreedingCoeff=0.3446;MQ=59.99;MQ0=29;MQRankSum=-2.336;QD=6.39;ReadPosRankSum=-1.643;VQSLOD=2.0425;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:14:10.97:46,0,11	0/0:9,0:9:3.01:0,3,49	0/0:36,0:10:0:0,0,0	./.	0/0:14,0:14:9.01:0,9,164	0/0:15,0:20:5.38:0,5,34	0/0:12,0:13:7.77:0,8,48	0/0:22,0:21:12:0,12,171	0/0:16,0:16:21.07:0,21,964	0/0:15,0:15:9.03:0,9,423	0/0:10,0:9:3.01:0,3,72	0/0:14,0:17:18.05:0,18,505	1/1:5,8:14:8.77:247,9,0	1/1:9,5:14:3.01:89,3,0	0/0:23,0:25:37.32:0,37,1067	0/0:12,0:15:33.09:0,33,886	0/0:9,0:8:9.03:0,9,184	0/0:10,0:10:13.29:0,13,330	0/0:16,0:15:3.01:0,3,97	0/0:13,0:12:9.01:0,9,135	0/0:16,0:19:15.04:0,15,304	0/0:9,0:13:5.78:0,6,180	0/0:11,0:12:5.70:0,6,90	0/0:12,0:12:8.83:0,9,322	0/0:9,0:9:3.01:0,3,84	0/0:14,0:14:21.07:0,21,662	0/0:18,0:20:24.06:0,24,392	0/0:14,0:12:6:0,6,141
chr10	80864008	.	GTC	G	12959.73	PASS	AB=0.512;AC=35;AF=0.625;AN=56;BaseQRankSum=8.564;DP=556;FS=3.006;HRun=0;HaplotypeScore=83.1835;InbreedingCoeff=0.9301;MQ=86.14;MQ0=0;MQRankSum=-2.815;QD=34.93;ReadPosRankSum=5.746;VQSLOD=6.6531;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:18.03:0,18,214	1/1:0,10:10:24.08:389,24,0	0/0:26,0:27:42.87:0,43,1128	0/0:14,1:15:35.81:0,36,466	1/1:0,29:29:72.88:1059,73,0	1/1:23,0:23:15.81:45,16,0	1/1:23,0:23:17.68:51,18,0	1/1:0,22:23:69.07:949,69,0	0/0:21,0:21:63.17:0,63,1138	1/1:0,20:20:60.20:972,60,0	1/1:0,17:17:45.15:728,45,0	0/0:18,0:18:54.14:0,54,1010	0/0:4,0:4:11.23:0,11,104	0/0:12,0:12:19.16:0,19,179	1/1:0,24:24:66.23:1070,66,0	0/1:1,20:22:4.96:751,0,5	1/1:0,24:25:50.38:783,50,0	1/1:0,8:8:21.07:340,21,0	1/1:0,11:12:36.07:489,36,0	1/1:0,40:40:99:1673,114,0	1/1:1,22:25:55.61:832,56,0	0/0:32,0:32:96.33:0,96,1895	0/0:22,0:22:66.16:0,66,1188	0/0:18,0:18:54.14:0,54,977	1/1:0,13:13:36.12:584,36,0	1/1:0,25:25:72.19:1080,72,0	1/1:0,21:21:45.15:728,45,0	1/1:0,11:11:27.09:437,27,0
chr10	80864009	.	T	TCC	233.85	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=6.372;DP=554;FS=10.724;HRun=9;HaplotypeScore=132.3058;InbreedingCoeff=0.8005;MQ=86.11;MQ0=0;MQRankSum=-1.110;QD=2.54;ReadPosRankSum=-0.667;VQSLOD=-0.1369;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,9:15:9.03:131,9,0	0/0:10,0:10:22.68:0,23,109	0/0:28,0:28:49.28:0,49,518	0/1:15,0:14:7.49:7,0,140	0/0:29,0:29:59.39:0,59,283	1/1:23,0:23:35.09:103,35,0	1/1:23,0:23:27.82:88,28,0	0/0:23,0:23:47.54:0,48,222	0/0:20,0:20:54.11:0,54,574	0/0:20,0:20:56.63:0,57,272	0/0:17,0:17:42.57:0,43,204	0/0:17,0:17:48.10:0,48,511	1/1:6,0:6:3.01:34,3,0	1/1:10,0:10:3:27,3,0	0/0:24,0:24:62.50:0,62,300	0/0:22,0:22:51.30:0,51,264	0/0:25,0:24:48:0,48,229	0/0:8,0:8:19.89:0,20,96	0/0:12,0:12:25.51:0,26,123	0/0:40,0:40:92.94:0,93,439	0/0:25,0:25:51.60:0,52,246	0/0:32,0:32:84.14:0,84,893	0/0:21,0:22:51.07:0,51,535	0/0:18,0:18:45.11:0,45,479	0/0:13,0:13:34.09:0,34,164	0/0:25,0:25:37.80:0,38,242	0/0:21,0:21:42.54:0,43,204	0/0:11,0:11:25.57:0,26,123
chr10	80864010	.	C	CG	1662.40	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-4.274;DP=566;FS=1.222;HRun=0;HaplotypeScore=120.6524;InbreedingCoeff=0.6208;MQ=85.52;MQ0=0;MQRankSum=-1.589;QD=22.77;ReadPosRankSum=-0.876;VQSLOD=4.1150;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:14.65:0,15,98	0/0:10,0:10:8.17:0,8,20	0/0:30,0:30:43.44:0,43,814	0/0:13,0:12:2.82:0,3,267	0/0:31,0:31:37.62:0,38,141	1/1:0,25:25:66.22:939,66,0	1/1:0,23:23:57.19:810,57,0	0/0:23,0:23:10.90:0,11,129	0/0:20,0:20:60.18:0,60,802	0/0:20,0:20:19:0,19,51	0/0:20,0:20:16.48:0,16,40	0/0:17,0:17:51.16:0,51,693	0/0:6,0:6:11.53:0,12,77	0/0:9,0:9:14.75:0,15,94	0/0:25,0:25:24.17:0,24,56	0/0:22,0:22:22.64:0,23,89	0/0:25,0:24:17.13:0,17,64	0/0:8,0:8:8:0,8,18	0/0:12,0:12:19.50:0,19,96	0/0:42,0:42:53.19:0,53,178	0/0:26,0:26:23.06:0,23,97	0/0:32,0:32:96.27:0,96,1263	0/0:23,0:23:63.10:0,63,805	0/0:18,0:18:54.15:0,54,704	0/0:13,0:13:13.51:0,14,30	0/1:25,0:25:42.38:42,0,59	0/0:22,0:22:14.13:0,14,34	0/0:11,0:11:9.77:0,10,23
chr10	80865470	.	AG	A	841.27	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.478;DP=418;FS=0.000;HRun=7;HaplotypeScore=49.2993;InbreedingCoeff=0.9681;MQ=73.45;MQ0=9;MQRankSum=-0.977;QD=20.03;ReadPosRankSum=1.770;VQSLOD=2.9758;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:16:39.08:398,39,0	0/0:7,0:7:18.06:0,18,223	0/0:31,0:19:41.97:0,42,467	0/0:23,0:17:19.54:0,20,213	0/0:18,0:18:45.14:0,45,566	0/0:15,0:15:39.11:0,39,491	0/0:11,0:11:30.06:0,30,349	0/0:21,0:20:56.96:0,57,611	0/0:9,0:9:12:0,12,134	0/0:13,0:13:33.10:0,33,403	0/0:17,0:17:48.15:0,48,602	0/0:14,0:14:33.09:0,33,402	1/1:0,15:15:36.03:355,36,0	1/1:3,8:10:23.97:231,24,0	0/0:24,0:24:51.16:0,51,640	0/0:14,0:14:38.95:0,39,453	0/0:16,0:16:38.22:0,38,504	0/0:7,0:7:12.04:0,12,151	0/0:20,0:20:37.31:0,37,439	0/0:13,0:13:36.02:0,36,421	0/0:12,0:12:30.10:0,30,374	0/0:16,0:15:39.12:0,39,490	0/0:16,0:16:45.13:0,45,551	0/0:14,0:14:33.11:0,33,415	0/0:7,0:7:18.06:0,18,226	0/0:15,0:15:39.12:0,39,487	0/0:10,0:10:27.09:0,27,339	0/0:11,0:9:24.08:0,24,302
chr10	80865483	.	AAGAGAG	A	120.19	PASS	AB=0.818;AC=8;AF=0.167;AN=48;BaseQRankSum=3.866;DP=443;FS=21.516;HRun=0;HaplotypeScore=96.6700;InbreedingCoeff=0.1341;MQ=64.90;MQ0=16;MQRankSum=-1.643;QD=1.14;ReadPosRankSum=-1.643;VQSLOD=-0.5062;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:12.03:0,12,233	0/0:8,0:7:2.98:0,3,25	./.	0/0:19,0:13:0:0,0,0	0/0:17,0:17:7.55:0,8,171	0/1:16,3:19:8.98:53,0,9	1/1:10,0:10:3.01:57,3,0	0/0:23,0:21:5.90:0,6,37	0/0:9,0:9:3.01:0,3,46	0/0:17,0:17:17.99:0,18,177	0/0:17,0:17:8.95:0,9,69	0/0:17,0:17:12.04:0,12,251	1/1:17,0:17:2.74:12,3,0	0/1:15,0:15:8.57:9,0,16	0/1:19,7:25:16.96:54,0,17	0/1:10,1:16:50.83:51,0,54	0/0:22,0:21:7.76:0,8,63	./.	0/0:14,0:14:10.28:0,10,201	0/0:15,0:14:2.14:0,2,23	0/0:12,0:11:12.02:0,12,189	0/0:14,0:13:3.01:0,3,50	0/0:16,0:15:12.01:0,12,161	0/0:16,0:19:11.99:0,12,178	./.	0/0:12,0:12:9.01:0,9,90	0/0:16,0:16:24.06:0,24,383	./.
chr10	80866180	.	AT	A	16157.80	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=10.523;DP=628;FS=1.231;HRun=4;HaplotypeScore=59.7751;InbreedingCoeff=0.9981;MQ=82.26;MQ0=0;MQRankSum=-1.914;QD=32.06;ReadPosRankSum=2.367;VQSLOD=5.3960;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:54.16:647,54,0	1/1:0,8:8:24.07:288,24,0	0/0:17,0:17:42.09:0,42,498	0/0:16,0:16:28.44:0,28,375	1/1:1,30:31:87.18:1011,87,0	1/1:3,38:41:99:1223,102,0	1/1:1,7:8:21.06:252,21,0	1/1:1,30:31:87.24:1022,87,0	0/0:21,0:21:63.21:0,63,881	1/1:1,28:29:84.26:1008,84,0	1/1:0,31:31:90.11:1041,90,0	0/0:16,0:16:45.07:0,45,588	1/1:2,30:32:84.26:1007,84,0	1/1:1,18:19:48.15:576,48,0	1/1:0,18:18:39.12:468,39,0	1/1:0,18:18:51.16:612,51,0	1/1:0,25:25:66.09:756,66,0	1/1:0,15:15:36.11:431,36,0	1/1:0,24:24:72.16:811,72,0	1/1:0,35:35:99:1190,102,0	1/1:2,11:13:33.10:396,33,0	0/0:24,0:24:72.22:0,72,974	0/0:20,0:20:57.18:0,57,783	0/0:10,0:10:27.09:0,27,377	1/1:1,25:26:72.22:863,72,0	1/1:1,39:40:99:1410,120,0	1/1:2,28:30:72.22:863,72,0	1/1:1,8:9:24.07:285,24,0
chr10	80866763	.	C	CATGTGTGTGTGT	12552.07	PASS	AB=0.869;AC=35;AF=0.673;AN=52;BaseQRankSum=-0.414;DP=579;FS=6.228;HRun=0;HaplotypeScore=200.4730;InbreedingCoeff=0.6425;MQ=66.72;MQ0=3;MQRankSum=-5.989;QD=31.30;ReadPosRankSum=-4.210;VQSLOD=3.2014;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:24:41.98:595,42,0	1/1:4,6:13:3.01:189,3,0	0/0:35,0:18:39.93:0,40,379	0/0:24,0:15:34.76:0,35,277	1/1:8,0:20:3.48:104,3,0	0/1:16,0:17:99:144,0,579	0/1:18,0:18:99:129,0,635	1/1:19,0:18:54.09:813,54,0	0/0:17,0:18:50.98:0,51,1204	1/1:7,0:29:75.06:1753,75,0	1/1:3,0:23:21:614,21,0	0/0:13,0:14:39.08:0,39,1166	1/1:8,0:18:15.52:625,16,0	1/1:20,0:20:24.99:566,25,0	1/1:9,10:24:12.04:714,12,0	0/1:6,1:16:25.66:514,0,26	./.	1/1:14,0:13:28.78:439,29,0	1/1:7,0:24:59.26:1116,59,0	1/1:10,12:30:9.03:485,9,0	./.	0/0:15,0:15:35.97:0,36,949	0/0:22,0:26:54.44:0,54,1578	0/0:17,0:18:33.40:0,33,1244	1/1:12,5:22:8.24:381,8,0	1/1:32,0:33:94.72:2396,95,0	1/1:7,12:27:12.76:599,13,0	1/1:1,2:6:6.02:377,6,0
chr10	80867005	.	T	TA	1321.70	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.467;DP=463;FS=6.352;HRun=4;HaplotypeScore=46.5052;InbreedingCoeff=0.9835;MQ=77.21;MQ0=0;MQRankSum=-2.349;QD=32.24;ReadPosRankSum=1.153;VQSLOD=3.9736;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:21.07:287,21,0	0/0:7,0:7:21.06:0,21,238	0/0:16,0:16:39.06:0,39,413	0/0:9,0:9:23.92:0,24,240	0/0:24,0:24:69.15:0,69,768	0/0:13,0:13:39.10:0,39,432	0/0:6,0:6:18.05:0,18,204	0/0:33,0:33:99:0,99,1123	0/0:17,0:17:51.15:0,51,578	0/0:25,0:25:75.21:0,75,843	0/0:26,0:26:66.16:0,66,728	0/0:13,0:13:36.09:0,36,401	1/1:0,14:14:39.13:533,39,0	1/1:2,15:17:48.15:643,48,0	0/0:12,0:12:33.06:0,33,354	0/0:19,0:19:57.16:0,57,646	0/0:14,0:14:22.91:0,23,330	0/0:11,0:11:30.09:0,30,340	0/0:31,0:31:87.25:0,87,987	0/0:32,0:32:90.26:0,90,1020	0/0:5,0:5:15.04:0,15,170	0/0:7,0:7:21.06:0,21,238	0/0:21,0:21:57.15:0,57,639	0/0:7,0:7:20.80:0,21,216	0/0:15,0:15:45.13:0,45,510	0/0:21,0:21:60.17:0,60,681	0/0:28,0:28:78.19:0,78,863	0/0:10,0:10:30.05:0,30,326
chr10	80867466	.	G	GA	11023.23	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-9.194;DP=542;FS=1.957;HRun=8;HaplotypeScore=55.7950;InbreedingCoeff=0.9337;MQ=62.71;MQ0=4;MQRankSum=-2.988;QD=25.64;ReadPosRankSum=1.564;VQSLOD=5.6883;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,43:48:99:1294,99,0	1/1:2,7:9:18.05:208,18,0	0/0:9,0:7:5.21:0,5,78	0/0:10,0:9:2.58:0,3,119	1/1:2,22:24:66.14:728,66,0	1/1:3,17:20:54.12:606,54,0	1/1:4,15:19:33.10:378,33,0	1/1:7,11:18:31.34:366,31,0	0/0:15,0:15:36.02:0,36,329	1/1:3,17:20:51.15:589,51,0	1/1:5,19:24:36.54:628,37,0	0/0:15,0:15:39.02:0,39,357	1/1:2,7:9:15.04:173,15,0	1/1:4,10:14:33.10:378,33,0	1/1:2,10:12:24.07:277,24,0	1/1:2,18:20:20.67:489,21,0	1/1:6,32:37:54.01:873,54,0	1/1:5,16:20:47.97:533,48,0	1/1:4,15:18:42.10:474,42,0	1/1:1,18:19:48.14:547,48,0	1/1:2,8:10:18.05:208,18,0	0/0:19,0:19:18.88:0,19,407	0/0:27,0:26:63.03:0,63,576	0/0:17,0:17:45.02:0,45,411	1/1:3,15:18:39.06:450,39,0	1/1:2,24:26:72.19:819,72,0	1/1:3,20:23:26.69:557,27,0	1/1:3,16:18:39.12:450,39,0
chr10	80873361	.	G	GTTGT	13618.56	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=7.791;DP=421;FS=0.000;HRun=0;HaplotypeScore=80.2673;InbreedingCoeff=0.9272;MQ=65.90;MQ0=0;MQRankSum=-4.060;QD=49.52;ReadPosRankSum=1.528;VQSLOD=5.5387;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:39.95:0,40,623	1/1:1,1:2:3.01:76,3,0	0/0:18,0:19:19.88:0,20,587	0/0:12,0:12:24.08:0,24,401	1/1:4,15:19:48.08:1108,48,0	0/0:19,0:19:48.15:0,48,790	0/0:11,0:11:27.08:0,27,426	1/1:8,27:39:92.72:1698,93,0	0/0:14,0:14:36.10:0,36,578	1/1:1,14:15:45.06:908,45,0	1/1:4,14:19:44.99:948,45,0	0/0:13,0:13:36.10:0,36,617	0/0:6,0:6:12.04:0,12,201	0/0:7,0:7:21.05:0,21,350	1/1:0,12:13:39.13:991,39,0	1/1:4,10:14:8.03:671,8,0	1/1:3,19:22:30.10:762,30,0	1/1:4,22:27:33.89:1013,34,0	1/1:7,9:18:45.12:960,45,0	1/1:3,15:18:48.08:1085,48,0	1/1:3,11:15:33.03:746,33,0	0/0:8,0:8:15.05:0,15,273	0/0:9,0:9:27.09:0,27,491	0/0:9,0:9:21.05:0,21,351	1/1:4,10:14:24.38:492,24,0	1/1:4,10:15:42.07:891,42,0	1/1:2,11:14:30.10:762,30,0	1/1:2,9:11:1.65:507,2,0
chr10	80873425	.	CTAT	C	1095.68	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.956;DP=291;FS=2.701;HRun=0;HaplotypeScore=53.6278;InbreedingCoeff=0.6828;MQ=69.24;MQ0=1;MQRankSum=-0.401;QD=23.31;ReadPosRankSum=2.773;VQSLOD=3.2061;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:15:24.08:358,24,0	0/0:1,0:1:3.01:0,3,63	0/0:7,0:7:11.78:0,12,116	0/0:7,0:5:6.60:0,7,64	0/0:14,0:14:24.07:0,24,464	1/1:4,12:16:30.10:448,30,0	1/1:2,2:4:6.02:90,6,0	0/0:37,0:37:72.24:0,72,1409	0/0:7,0:7:12.03:0,12,215	0/0:16,0:16:39.13:0,39,787	0/0:9,0:9:27.07:0,27,491	0/0:5,0:5:3:0,3,27	1/1:0,6:6:12.04:179,12,0	1/1:2,4:6:12.04:179,12,0	0/0:5,0:5:3.01:0,3,63	0/0:5,0:5:3.01:0,3,63	0/0:14,0:14:27.02:0,27,468	0/0:20,0:19:39.13:0,39,816	0/0:15,0:15:39.13:0,39,772	0/0:5,0:5:3.01:0,3,63	0/0:9,0:9:15.05:0,15,298	0/0:2,0:2:3.01:0,3,63	0/0:6,0:6:6.01:0,6,79	0/0:5,0:5:6.02:0,6,125	0/0:15,0:15:30.10:0,30,604	0/0:17,0:17:50.75:0,51,971	0/0:14,0:14:27.09:0,27,540	0/0:9,0:9:27.09:0,27,565
chr10	80874208	.	G	GCA	15018.52	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=15.125;DP=665;FS=16.697;HRun=0;HaplotypeScore=123.6715;InbreedingCoeff=0.9992;MQ=70.67;MQ0=0;MQRankSum=-8.103;QD=43.66;ReadPosRankSum=-1.999;VQSLOD=4.2680;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,175,2655	1/1:0,11:11:33.11:575,33,0	0/0:19,0:19:50.84:0,51,724	0/0:23,0:21:56.93:0,57,831	1/1:1,12:15:26.83:466,27,0	0/0:18,0:18:54.18:0,54,826	0/0:24,0:24:72.21:0,72,1059	1/1:3,30:34:99:1732,99,0	0/0:21,0:21:57.18:0,57,845	1/1:2,23:27:69.21:1124,69,0	1/1:2,15:18:33.11:536,33,0	0/0:34,0:34:96.33:0,96,1463	0/0:28,0:28:75.24:0,75,1121	0/0:24,0:24:69.17:0,69,1000	1/1:1,29:31:78.20:1358,78,0	1/1:1,27:28:72.25:1269,72,0	1/1:4,24:28:66.11:1108,66,0	1/1:2,26:29:78.26:1374,78,0	1/1:6,13:19:46.59:691,47,0	1/1:2,19:23:63.21:1094,63,0	1/1:4,13:17:39.12:650,39,0	0/0:25,0:25:72.24:0,72,1100	0/0:27,0:27:78.25:0,78,1168	0/0:20,0:20:51.17:0,51,781	1/1:2,11:13:33.11:587,33,0	1/1:7,14:21:60.19:989,60,0	1/1:2,19:22:66.16:1121,66,0	1/1:1,6:7:21.03:346,21,0
chr10	80874603	.	A	AT	9579.52	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-13.843;DP=638;FS=25.662;HRun=9;HaplotypeScore=63.4101;InbreedingCoeff=0.9870;MQ=73.80;MQ0=0;MQRankSum=-0.510;QD=25.61;ReadPosRankSum=-0.627;VQSLOD=3.2175;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:68.96:0,69,599	1/1:1,11:12:33.09:365,33,0	0/0:23,0:23:34.40:0,34,349	0/0:6,0:6:17.87:0,18,145	1/1:1,31:32:90.16:969,90,0	0/0:22,0:22:59.97:0,60,516	0/0:11,0:11:26.99:0,27,234	1/1:6,22:28:43.11:688,43,0	0/0:20,0:20:56.98:0,57,495	1/1:5,24:29:66.18:730,66,0	1/1:6,19:25:28.05:524,28,0	0/0:25,0:25:68.95:0,69,592	0/0:28,0:28:71.94:0,72,620	0/0:31,0:34:87.08:0,87,721	1/1:6,18:24:7.91:485,8,0	1/1:3,21:24:40.12:671,40,0	1/1:2,20:22:31.10:571,31,0	1/1:5,12:18:38.94:411,39,0	1/1:6,15:21:45.10:486,45,0	1/1:1,23:24:69.15:750,69,0	1/1:0,11:11:27.07:299,27,0	0/0:26,0:26:65.98:0,66,573	0/0:23,0:23:59.95:0,60,516	0/0:17,0:17:47.98:0,48,417	1/1:6,28:34:78.21:863,78,0	1/1:4,22:27:45.97:718,46,0	1/1:6,31:37:78.21:863,78,0	1/1:1,5:6:18.02:187,18,0
chr10	80875218	.	T	TA	12005.93	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-8.065;DP=397;FS=2.590;HRun=3;HaplotypeScore=36.6592;InbreedingCoeff=0.9451;MQ=66.22;MQ0=0;MQRankSum=-2.639;QD=35.63;ReadPosRankSum=0.279;VQSLOD=4.7776;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:27.09:378,27,0	1/1:1,10:11:24.08:336,24,0	0/0:6,0:6:15.04:0,15,174	0/0:2,0:2:6.02:0,6,72	1/1:0,23:23:69.09:917,69,0	1/1:1,10:11:27.09:378,27,0	1/1:0,5:5:15.05:210,15,0	1/1:5,36:40:99:1400,105,0	0/0:10,0:10:27.07:0,27,312	1/1:2,12:14:36.06:486,36,0	1/1:3,16:19:48.16:672,48,0	0/0:17,0:17:51.16:0,51,612	1/1:2,11:13:33.11:462,33,0	1/1:0,7:7:21.07:294,21,0	1/1:1,13:14:39.13:542,39,0	1/1:1,11:12:36.09:483,36,0	1/1:0,21:21:51.17:708,51,0	1/1:3,6:8:17.89:224,18,0	1/1:2,16:18:48.16:672,48,0	1/1:2,31:33:89.14:1219,89,0	1/1:0,9:9:24.08:335,24,0	0/0:9,0:9:18.05:0,18,216	0/0:12,0:12:30.09:0,30,360	0/0:4,0:4:12.02:0,12,132	1/1:3,12:15:33.07:440,33,0	1/1:1,24:25:72.18:967,72,0	1/1:3,18:21:57.19:797,57,0	1/1:0,3:3:6.02:84,6,0
chr10	80875300	.	CATATAT	C	11589.52	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=4.619;DP=337;FS=1.123;HRun=0;HaplotypeScore=90.3121;InbreedingCoeff=0.8623;MQ=63.86;MQ0=0;MQRankSum=-9.046;QD=47.89;ReadPosRankSum=1.868;VQSLOD=4.9680;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39.13:0,39,1234	1/1:0,7:7:21.07:407,21,0	0/0:8,0:6:9.81:0,10,106	0/0:9,0:9:9.36:0,9,110	1/1:5,20:25:54.18:1117,54,0	0/0:8,0:13:15.05:0,15,397	0/0:0,0:2:3.01:0,3,80	1/1:4,24:27:69.22:1415,69,0	0/0:6,0:6:15.05:0,15,506	1/1:6,10:16:39.13:849,39,0	1/1:5,12:17:39.13:834,39,0	0/0:12,0:13:36.12:0,36,1137	0/0:12,0:12:30.10:0,30,1021	0/0:6,0:6:18.06:0,18,610	1/1:4,9:13:30.10:622,30,0	1/1:2,6:8:21.07:452,21,0	1/1:8,7:15:21.07:437,21,0	1/1:2,4:5:9.03:175,9,0	1/1:4,14:18:45.15:958,45,0	1/1:8,14:22:51.16:1058,51,0	1/1:1,5:6:6.02:104,6,0	0/0:1,0:1:3.01:0,3,103	0/0:9,0:9:15.05:0,15,394	0/0:2,0:2:3.01:0,3,90	1/1:2,5:7:15.05:318,15,0	1/1:6,11:17:39.13:862,39,0	1/1:5,30:35:84.29:1849,84,0	1/1:0,2:2:6.02:133,6,0
chr10	80875575	.	A	AT	7208.60	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-4.253;DP=385;FS=1.361;HRun=7;HaplotypeScore=56.4598;InbreedingCoeff=0.9682;MQ=74.30;MQ0=0;MQRankSum=-6.796;QD=29.67;ReadPosRankSum=-0.261;VQSLOD=5.2113;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.05:0,48,457	0/0:12,0:12:30.03:0,30,284	0/0:9,0:9:14.01:0,14,168	0/0:10,0:10:20.22:0,20,170	1/1:4,18:22:51.16:616,51,0	0/0:18,0:18:45.05:0,45,424	0/0:12,0:12:27.03:0,27,255	1/1:10,26:36:58.27:974,58,0	0/0:10,0:9:27.02:0,27,254	1/1:4,16:20:51.16:616,51,0	1/1:5,13:18:42.12:497,42,0	0/0:10,0:10:30.05:0,30,290	0/0:16,0:16:42.07:0,42,406	0/0:9,0:9:24.04:0,24,232	1/1:1,18:19:57.13:672,57,0	1/1:2,7:9:24.06:279,24,0	1/1:3,11:14:38.99:422,39,0	1/1:2,6:8:18.06:217,18,0	1/1:4,14:18:45.13:534,45,0	1/1:3,20:23:63.11:728,63,0	1/1:3,5:8:11.99:129,12,0	0/0:7,0:7:21.03:0,21,203	0/0:8,0:8:21.03:0,21,203	0/0:3,0:3:6.01:0,6,58	1/1:1,5:6:15:165,15,0	1/1:3,11:14:39.10:458,39,0	1/1:4,17:21:63.19:758,63,0	1/1:2,4:6:12.04:145,12,0
chr10	80875610	.	TTA	T	901.48	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-4.325;DP=367;FS=16.973;HRun=0;HaplotypeScore=94.2247;InbreedingCoeff=0.7442;MQ=69.34;MQ0=1;MQRankSum=2.791;QD=24.36;ReadPosRankSum=0.398;VQSLOD=3.0796;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:43.69:0,44,250	0/0:8,0:8:23.34:0,23,147	0/0:9,0:8:17.18:0,17,208	0/0:7,0:7:8.65:0,9,125	0/0:16,0:16:40.52:0,41,219	1/1:0,22:21:48.16:776,48,0	1/1:0,8:8:15.05:243,15,0	0/0:31,0:31:64.67:0,65,450	0/0:9,0:8:24.08:0,24,472	0/0:23,0:23:63.72:0,64,360	0/0:12,0:12:12.79:0,13,174	0/0:16,0:16:48.13:0,48,839	0/0:9,0:9:26.22:0,26,151	0/0:5,0:5:14.71:0,15,99	0/0:22,0:22:61.95:0,62,379	0/0:10,0:10:29.05:0,29,167	0/0:12,0:12:28.72:0,29,201	0/0:5,0:5:14.57:0,15,102	0/0:18,0:18:52.24:0,52,312	0/0:22,0:22:34.02:0,34,317	0/1:7,0:7:3.21:3,0,99	0/0:12,0:12:33.09:0,33,566	0/0:9,0:9:24.07:0,24,424	0/0:2,0:2:6.02:0,6,111	0/0:9,0:9:26.01:0,26,161	0/0:20,0:20:57.92:0,58,334	0/0:21,0:20:61.02:0,61,378	0/0:7,0:7:20.54:0,21,136
chr10	80875611	.	TA	T	6205.05	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=7.895;DP=363;FS=5.765;HRun=9;HaplotypeScore=68.7840;InbreedingCoeff=0.8341;MQ=69.38;MQ0=1;MQRankSum=-6.761;QD=20.21;ReadPosRankSum=1.068;VQSLOD=5.5836;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:15:39.02:357,39,0	1/1:3,6:9:15:137,15,0	0/0:9,0:8:14.98:0,15,130	0/1:7,0:7:26.45:26,0,37	1/1:2,14:16:44.86:386,45,0	1/1:22,0:21:42.85:182,43,0	1/1:8,0:8:13.52:57,14,0	1/1:9,22:31:80.93:713,81,0	0/0:8,1:8:24.07:0,24,277	1/1:3,20:23:60.03:548,60,0	1/1:1,10:11:26.96:239,27,0	0/0:16,0:16:39.10:0,39,440	1/1:0,8:8:24.01:220,24,0	1/1:2,3:5:9:82,9,0	1/1:5,16:21:50.93:452,51,0	1/1:4,7:11:27:242,27,0	1/1:4,8:12:27:243,27,0	1/1:0,5:5:12:109,12,0	1/1:3,15:18:48.02:439,48,0	1/1:6,15:22:49.77:420,50,0	1/1:3,4:7:8.87:63,9,0	0/0:11,0:11:24.07:0,24,277	0/0:9,0:9:24.05:0,24,259	0/0:2,0:2:6.02:0,6,69	1/1:0,9:9:24.01:219,24,0	1/1:2,18:20:54.03:493,54,0	1/1:3,17:19:51.02:466,51,0	1/1:3,4:7:12.01:110,12,0
chr10	80875673	.	TC	T	9831.87	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=6.424;DP=400;FS=0.395;HRun=1;HaplotypeScore=54.4249;InbreedingCoeff=0.9821;MQ=78.05;MQ0=1;MQRankSum=-2.686;QD=39.17;ReadPosRankSum=0.234;VQSLOD=5.1473;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:33.09:0,33,461	1/1:0,9:9:27.09:376,27,0	0/0:17,0:17:44.55:0,45,529	0/0:6,0:6:10.95:0,11,101	1/1:1,16:17:48.15:655,48,0	0/0:22,0:21:47.92:0,48,662	0/0:12,0:12:33.08:0,33,444	1/1:0,23:23:69.21:931,69,0	0/0:10,0:10:30.08:0,30,419	1/1:2,18:20:57.08:734,57,0	1/1:1,13:14:42.14:586,42,0	0/0:15,0:15:45.14:0,45,639	0/0:15,0:15:45.11:0,45,596	0/0:8,0:8:18.05:0,18,244	1/1:1,18:19:57.14:757,57,0	1/1:3,13:16:40.72:591,41,0	1/1:3,9:12:36.08:455,36,0	1/1:1,6:7:21.04:269,21,0	1/1:3,11:14:42.11:540,42,0	1/1:0,23:23:69.10:895,69,0	1/1:0,5:5:15.05:209,15,0	0/0:15,0:15:45.15:0,45,658	0/0:14,0:14:42.10:0,42,558	0/0:3,0:3:9.03:0,9,132	1/1:0,16:16:48.12:647,48,0	1/1:4,20:24:72.18:954,72,0	1/1:2,20:22:66.16:879,66,0	1/1:0,10:10:30:355,30,0
chr10	80875749	.	TTTG	T	1059.57	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=0.633;DP=553;FS=27.987;HRun=0;HaplotypeScore=140.8738;InbreedingCoeff=0.4794;MQ=65.89;MQ0=1;MQRankSum=-6.496;QD=5.00;ReadPosRankSum=0.586;VQSLOD=1.3268;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:23.81:137,24,0	0/0:6,0:6:4.41:0,4,30	0/0:22,0:20:19.53:0,20,415	0/0:6,0:4:9.03:0,9,167	0/0:35,0:35:21.78:0,22,225	1/1:22,2:24:33.30:258,33,0	1/1:14,0:14:25.43:159,25,0	0/1:28,0:28:15.96:16,0,179	0/0:13,0:13:10.11:0,10,651	0/0:31,0:31:45.17:0,45,279	0/0:27,0:27:15.49:0,15,101	0/0:18,0:18:51.13:0,51,871	1/1:24,2:26:54.68:385,55,0	1/1:23,0:23:38.45:224,38,0	0/1:21,0:21:21.45:21,0,27	0/0:20,0:20:17.21:0,17,93	0/0:25,0:25:5.62:0,6,86	0/1:15,0:15:4.30:4,0,51	0/0:23,0:23:37.22:0,37,222	0/0:24,0:24:11.11:0,11,131	0/0:8,0:8:5.28:0,5,25	0/0:11,0:11:30.06:0,30,507	0/0:24,0:24:69.05:0,69,1029	0/0:11,0:11:29.28:0,29,509	0/0:16,0:16:14.45:0,14,126	0/0:21,0:21:2.11:0,2,75	0/1:27,0:27:30.03:30,0,56	0/1:15,0:15:5.23:5,0,55
chr10	80875750	.	TTG	T	2519.93	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-6.585;DP=552;FS=1.040;HRun=0;HaplotypeScore=125.9965;InbreedingCoeff=0.8711;MQ=65.10;MQ0=1;MQRankSum=-1.589;QD=19.69;ReadPosRankSum=-1.856;VQSLOD=3.6879;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:19:26.91:354,27,0	0/0:6,0:6:13.73:0,14,59	0/1:22,0:20:12.07:12,0,314	0/0:5,0:3:9.03:0,9,133	0/0:35,0:35:71.42:0,71,360	1/1:5,18:23:38.95:500,39,0	1/1:3,11:14:32.82:401,33,0	0/0:28,0:28:40.18:0,40,272	0/0:13,0:13:30.02:0,30,537	0/0:32,0:32:70.56:0,71,385	0/0:28,0:28:47.45:0,47,208	0/0:18,0:18:50.88:0,51,681	1/1:17,10:27:77.40:861,77,0	1/1:4,19:23:41.81:570,42,0	0/0:21,0:21:25.60:0,26,105	0/0:20,0:20:40.67:0,41,178	0/0:25,0:25:47.76:0,48,203	0/0:15,0:15:17.84:0,18,92	0/0:23,0:23:58.90:0,59,318	0/0:24,0:24:47.83:0,48,231	0/0:8,0:8:16.06:0,16,60	0/0:11,0:11:30.03:0,30,397	0/0:24,0:24:68.81:0,69,855	0/0:10,0:10:29.58:0,30,419	0/0:15,0:15:34.46:0,34,190	0/0:21,0:21:29.55:0,30,157	0/0:27,0:27:28.68:0,29,155	0/0:15,0:15:22.52:0,23,114
chr10	80875751	.	TG	T	1729.41	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-6.109;DP=550;FS=1.001;HRun=1;HaplotypeScore=118.4054;InbreedingCoeff=0.9258;MQ=64.34;MQ0=1;MQRankSum=1.374;QD=16.32;ReadPosRankSum=-1.946;VQSLOD=3.2054;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,3:19:26.90:222,27,0	0/0:6,0:6:16.88:0,17,89	0/0:21,0:19:0.17:0,0,284	0/0:5,0:3:9.03:0,9,107	0/0:35,0:35:90.54:0,91,498	1/1:20,3:23:38.93:342,39,0	1/1:12,2:14:32.97:313,33,0	0/0:29,0:29:63.60:0,64,364	0/0:14,0:14:34.50:0,34,435	0/0:31,0:31:80.03:0,80,498	0/0:26,0:26:58.64:0,59,301	0/0:18,0:18:49.84:0,50,521	1/1:24,3:27:77.86:659,78,0	1/1:19,4:23:41.56:367,42,0	0/0:21,0:21:46.64:0,47,205	0/0:20,0:20:48.32:0,48,261	0/0:25,0:25:64.90:0,65,317	0/0:14,0:14:28.53:0,29,132	0/0:23,0:23:66.29:0,66,409	0/0:23,0:23:60.65:0,61,320	0/0:8,0:8:19.66:0,20,95	0/0:11,0:11:29.81:0,30,288	0/0:25,0:25:69.14:0,69,709	0/0:10,0:10:29.30:0,29,330	0/0:15,0:15:41.87:0,42,249	0/0:21,0:21:42.35:0,42,236	0/0:27,0:27:57.52:0,58,284	0/0:16,0:16:35.98:0,36,178
chr10	80875752	.	GTTTT	G	11110.10	PASS	AB=0.538;AC=31;AF=0.554;AN=56;BaseQRankSum=-3.120;DP=546;FS=24.993;HRun=12;HaplotypeScore=114.8858;InbreedingCoeff=0.8888;MQ=62.65;MQ0=1;MQRankSum=-0.201;QD=32.87;ReadPosRankSum=5.764;VQSLOD=1.7483;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:26.96:0,27,237	1/1:1,5:6:15.05:227,15,0	0/0:16,0:17:42.95:0,43,508	0/0:5,0:3:9.03:0,9,186	1/1:6,28:34:80.85:1111,81,0	0/0:23,0:23:38.20:0,38,338	0/0:14,0:14:0.39:0,0,290	1/1:7,21:29:64.30:804,64,0	0/0:14,0:15:45.13:0,45,933	1/1:5,26:31:71.96:969,72,0	1/1:1,25:26:71.70:895,72,0	0/0:15,0:17:51.16:0,51,1065	0/0:27,0:27:77.18:0,77,672	0/0:23,0:23:41.91:0,42,376	1/1:2,19:21:51.16:771,51,0	1/1:3,17:20:45.12:661,45,0	1/1:4,21:25:60.16:906,60,0	0/1:2,12:14:9.13:378,0,9	1/1:4,18:22:51.07:725,51,0	1/1:9,14:23:51.11:769,51,0	1/1:1,7:8:18.05:272,18,0	0/0:9,0:11:30.09:0,30,647	0/0:23,0:25:63.18:0,63,1193	0/0:10,0:10:30.09:0,30,643	1/1:6,9:15:33.08:479,33,0	1/1:2,19:21:47.96:646,48,0	1/1:3,24:27:66.21:998,66,0	1/1:4,12:16:33.07:499,33,0
chr10	80876099	.	A	AT	11841.56	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=11.209;DP=580;FS=3.774;HRun=3;HaplotypeScore=103.9649;InbreedingCoeff=0.9220;MQ=81.04;MQ0=0;MQRankSum=-2.719;QD=32.89;ReadPosRankSum=2.491;VQSLOD=4.9246;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.13:0,48,554	1/1:2,4:6:12.51:162,13,0	0/0:25,0:25:43.89:0,44,496	0/1:10,0:10:17.98:18,0,172	1/1:2,40:42:99:1436,114,0	0/0:22,0:22:58.41:0,58,301	0/0:14,0:14:37.66:0,38,196	1/1:4,23:27:72.17:885,72,0	0/0:16,0:16:42.11:0,42,490	1/1:1,20:21:60.10:722,60,0	1/1:3,25:28:76.39:949,76,0	0/0:11,0:11:30.08:0,30,350	0/0:23,0:23:69.14:0,69,757	0/0:23,0:23:67.98:0,68,763	1/1:1,21:23:60.19:792,60,0	1/1:1,16:17:45.15:608,45,0	1/1:2,21:23:54.18:714,54,0	1/1:1,15:16:39.13:514,39,0	1/1:1,18:19:54.10:652,54,0	1/1:2,36:38:99:1379,109,0	1/1:1,9:10:24.08:321,24,0	0/0:23,0:23:66.18:0,66,776	0/0:31,0:31:90.22:0,90,1034	0/0:15,0:15:39.10:0,39,446	1/1:1,21:22:54.18:725,54,0	1/1:1,18:19:54.18:720,54,0	1/1:2,31:33:75.25:1003,75,0	1/1:0,6:6:18.06:243,18,0
chr10	80876102	.	T	TAA	1335.39	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.692;DP=567;FS=4.166;HRun=8;HaplotypeScore=150.8351;InbreedingCoeff=0.9786;MQ=80.71;MQ0=0;MQRankSum=-3.058;QD=35.14;ReadPosRankSum=-0.322;VQSLOD=2.0860;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:45.59:0,46,502	0/0:5,0:5:13.57:0,14,78	0/0:23,0:24:56.65:0,57,551	0/0:10,0:10:25.89:0,26,239	0/0:40,0:40:95.41:0,95,433	1/1:4,20:24:57.19:886,57,0	1/1:2,12:14:36.12:571,36,0	0/0:24,0:24:65.36:0,65,358	0/0:14,0:14:39.10:0,39,435	0/0:22,0:22:45.81:0,46,222	0/0:27,0:27:68.71:0,69,363	0/0:10,0:10:27.07:0,27,301	0/0:24,0:24:60.15:0,60,669	0/0:24,0:24:39.64:0,40,634	0/0:22,0:22:51.31:0,51,256	0/0:16,0:16:42.10:0,42,201	0/0:21,0:21:46.95:0,47,207	0/0:16,0:16:34.71:0,35,167	0/0:18,0:18:45.75:0,46,247	0/0:38,0:38:87.18:0,87,449	0/0:9,0:9:22.17:0,22,102	0/0:22,0:22:63.16:0,63,699	0/0:32,0:32:84.20:0,84,936	0/0:14,0:14:39.11:0,39,435	0/0:22,0:22:53.35:0,53,256	0/0:20,0:20:56.81:0,57,281	0/0:31,0:31:68.88:0,69,314	0/0:6,0:6:15.57:0,16,64
chr10	80876840	.	A	AT	11782.68	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=15.619;DP=640;FS=8.952;HRun=6;HaplotypeScore=87.9504;InbreedingCoeff=0.9734;MQ=85.17;MQ0=0;MQRankSum=-3.107;QD=31.01;ReadPosRankSum=0.775;VQSLOD=4.7749;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.10:0,60,603	1/1:0,17:17:42.13:518,42,0	0/0:27,0:27:71.90:0,72,685	0/0:16,0:15:29.26:0,29,325	1/1:1,22:23:63.13:760,63,0	0/0:35,0:35:99:0,99,991	0/0:18,0:18:54.12:0,54,551	1/1:0,34:34:99:1209,102,0	0/0:21,0:21:63.11:0,63,625	1/1:3,29:31:87.16:990,87,0	1/1:0,17:17:48.15:597,48,0	0/0:13,0:13:36.06:0,36,357	0/0:17,0:17:48.11:0,48,490	0/0:27,0:27:75.13:0,75,751	1/1:0,29:29:66.11:822,66,0	1/1:2,24:26:66.21:822,66,0	1/1:0,17:17:48.10:578,48,0	1/1:1,15:16:39.12:484,39,0	1/1:5,18:23:23.52:555,24,0	1/1:1,33:34:99:1227,99,0	1/1:2,10:12:2.50:342,2,0	0/0:23,0:23:57.07:0,57,559	0/0:21,0:21:60.14:0,60,612	0/0:21,0:21:63.14:0,63,642	1/1:5,26:31:66.21:822,66,0	1/1:3,23:26:69.18:825,69,0	1/1:4,26:30:66.21:822,66,0	1/1:0,13:13:33.10:410,33,0
chr10	80877064	.	A	AC	14157.27	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-3.038;DP=608;FS=6.268;HRun=7;HaplotypeScore=67.9602;InbreedingCoeff=0.9993;MQ=85.07;MQ0=0;MQRankSum=-3.125;QD=29.68;ReadPosRankSum=0.198;VQSLOD=5.3187;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:20:42.13:507,42,0	1/1:0,12:12:30.09:361,30,0	0/0:22,0:21:60.07:0,60,570	0/0:18,0:18:30.40:0,30,276	1/1:7,23:30:87.23:1017,87,0	1/1:1,27:28:75.23:901,75,0	1/1:4,13:17:36.11:430,36,0	1/1:9,24:33:63.16:737,63,0	0/0:14,0:14:39.06:0,39,377	1/1:1,21:22:63.19:760,63,0	1/1:1,24:25:54.17:652,54,0	0/0:19,0:19:48.06:0,48,458	1/1:0,24:24:62.99:761,63,0	1/1:3,20:23:54.17:652,54,0	1/1:2,25:27:72.22:870,72,0	1/1:1,23:24:57.17:689,57,0	1/1:2,11:13:33.06:382,33,0	1/1:2,19:21:51.16:616,51,0	1/1:1,15:16:45.14:542,45,0	1/1:1,24:25:63.06:739,63,0	1/1:2,27:29:75.23:906,75,0	0/0:23,0:23:66.09:0,66,632	0/0:21,0:21:60.10:0,60,579	0/0:14,0:14:39.06:0,39,377	1/1:2,27:29:69.21:833,69,0	1/1:2,22:24:66.14:758,66,0	1/1:4,21:25:63.19:754,63,0	1/1:1,9:10:24.07:290,24,0
chr10	80877487	.	T	TACACAC	7057.05	PASS	AB=0.646;AC=35;AF=0.648;AN=54;BaseQRankSum=1.498;DP=661;FS=2.312;HRun=0;HaplotypeScore=185.4617;InbreedingCoeff=0.8188;MQ=59.43;MQ0=9;MQRankSum=-5.212;QD=17.69;ReadPosRankSum=-6.777;VQSLOD=2.1280;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:22.43:0,22,995	1/1:5,3:9:3.01:97,3,0	./.	0/0:43,0:26:8.86:0,9,120	1/1:15,7:27:8.95:183,9,0	1/1:7,0:19:14.65:192,15,0	1/1:17,4:27:19.50:501,20,0	1/1:24,0:24:15:195,15,0	0/0:15,0:16:30.10:0,30,596	0/1:14,10:31:3.60:1069,0,4	1/1:15,6:25:6.02:162,6,0	0/0:26,0:27:48.85:0,49,864	0/0:18,0:18:33.09:0,33,627	0/0:14,0:13:30.10:0,30,616	1/1:9,6:19:23.32:652,23,0	1/1:12,5:21:18.06:407,18,0	1/1:21,0:21:15.05:297,15,0	1/1:9,3:16:9.03:189,9,0	1/1:15,1:18:18.02:262,18,0	1/1:5,8:17:6.02:188,6,0	1/1:29,0:29:14.19:235,14,0	0/0:15,0:17:30.10:0,30,582	0/0:16,0:18:27.09:0,27,502	0/0:32,0:34:63.17:0,63,1138	1/1:15,9:29:18.04:500,18,0	1/1:21,11:41:74.21:1500,74,0	1/1:7,8:15:9.03:292,9,0	1/1:4,1:8:6.02:136,6,0
chr10	80878221	.	TTC	T	12919.58	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=14.314;DP=565;FS=0.664;HRun=0;HaplotypeScore=75.1886;InbreedingCoeff=0.9984;MQ=73.87;MQ0=6;MQRankSum=-2.435;QD=38.91;ReadPosRankSum=3.230;VQSLOD=6.6245;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.13:0,48,785	1/1:0,15:15:42.14:643,42,0	0/0:26,0:20:46.98:0,47,687	0/0:16,0:13:35.77:0,36,444	1/1:0,27:27:78.14:1113,78,0	0/0:23,0:23:69.20:0,69,1141	0/0:15,0:15:42.12:0,42,704	1/1:1,32:33:96.23:1298,96,0	0/0:18,0:18:51.13:0,51,818	1/1:0,24:24:72.22:1060,72,0	1/1:1,24:23:63.13:910,63,0	0/0:23,0:23:69.24:0,69,1213	0/0:20,0:20:57.17:0,57,991	0/0:17,0:17:51.12:0,51,836	1/1:0,22:21:57.19:872,57,0	1/1:1,12:13:33.11:505,33,0	1/1:0,19:19:36.12:551,36,0	1/1:1,12:13:23.98:450,24,0	1/1:0,19:19:54.16:767,54,0	1/1:0,20:20:53.97:675,54,0	1/1:1,7:8:18.06:275,18,0	0/0:23,0:23:66.15:0,66,1138	0/0:20,0:20:60.20:0,60,1045	0/0:15,0:15:45.05:0,45,771	1/1:0,26:26:66.22:1010,66,0	1/1:0,26:26:75.23:1124,75,0	1/1:1,32:33:84.12:1253,84,0	1/1:0,9:9:27.09:413,27,0
chr10	80878657	.	G	GAAAGGTACAGC	6648.13	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-9.333;DP=469;FS=8.843;HRun=0;HaplotypeScore=169.2338;InbreedingCoeff=0.9742;MQ=82.67;MQ0=0;MQRankSum=-9.675;QD=97.77;ReadPosRankSum=1.207;VQSLOD=4.6279;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,9:15:27.09:1455,27,0	0/0:15,0:15:36.12:0,36,1173	0/0:15,0:15:30.08:0,30,728	0/0:14,0:14:9.64:0,10,767	0/0:27,0:27:75.24:0,75,2302	1/1:4,10:14:30.10:1679,30,0	1/1:5,4:11:18.06:833,18,0	0/0:17,0:17:48.16:0,48,1348	0/0:7,0:7:18.03:0,18,535	0/0:19,0:19:54.19:0,54,1753	0/0:22,0:22:60.19:0,60,1914	0/0:18,0:18:48.15:0,48,1384	1/1:1,12:13:30.10:1683,30,0	1/1:5,8:15:18.06:998,18,0	0/0:12,0:12:36.11:0,36,1134	0/0:14,0:14:39.11:0,39,1080	0/0:19,0:19:51.14:0,51,1499	0/0:10,0:10:27.09:0,27,913	0/0:18,0:18:51.15:0,51,1511	0/0:32,0:32:93.31:0,93,2896	0/0:9,0:9:27.09:0,27,865	0/0:11,0:11:33.11:0,33,1069	0/0:28,0:28:78.21:0,78,2300	0/0:5,0:5:15.05:0,15,446	0/0:23,0:23:66.23:0,66,2155	0/0:24,0:24:66.22:0,66,2083	0/0:37,0:36:99:0,108,3430	0/0:5,0:5:15.05:0,15,502
chr10	80878701	.	G	GA	7223.42	PASS	AB=0.909;AC=33;AF=0.589;AN=56;BaseQRankSum=-5.424;DP=462;FS=8.919;HRun=9;HaplotypeScore=62.5534;InbreedingCoeff=0.8782;MQ=75.09;MQ0=0;MQRankSum=0.173;QD=25.52;ReadPosRankSum=0.742;VQSLOD=5.2905;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:50.96:0,51,439	1/1:5,5:10:12.03:133,12,0	0/0:9,0:9:11.96:0,12,98	0/0:14,0:14:23.18:0,23,186	1/1:0,21:22:65.93:681,66,0	0/0:18,0:18:32.98:0,33,286	0/0:18,0:18:41.97:0,42,365	1/1:2,29:32:90.04:956,90,0	0/0:15,0:15:44.93:0,45,383	1/1:3,15:18:22.09:464,22,0	1/1:4,14:19:41.95:446,42,0	0/0:17,1:18:5.79:0,6,279	0/0:11,0:11:23.98:0,24,208	0/0:16,0:16:41.99:0,42,364	1/1:1,13:14:42.11:463,42,0	1/1:1,15:16:45.12:498,45,0	1/1:1,20:22:33.94:585,34,0	1/1:2,11:13:30.08:332,30,0	1/1:4,11:15:7.01:294,7,0	1/1:4,17:21:51.14:564,51,0	1/1:2,6:8:18.05:199,18,0	0/0:13,1:14:2.84:0,3,249	0/0:23,0:23:62.98:0,63,547	0/1:9,1:10:3.14:3,0,204	1/1:4,15:20:41.91:432,42,0	1/1:3,17:20:48.12:522,48,0	1/1:4,16:20:51.11:551,51,0	1/1:0,3:3:9.02:100,9,0
chr10	80879071	.	ATG	A	152.71	PASS	AB=0.973;AC=8;AF=0.143;AN=56;BaseQRankSum=6.203;DP=600;FS=2.600;HRun=0;HaplotypeScore=167.0023;InbreedingCoeff=0.0965;MQ=69.91;MQ0=5;MQRankSum=-5.882;QD=1.16;ReadPosRankSum=-5.789;VQSLOD=0.8337;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:28,1:28:43.95:44,0,675	0/0:5,0:5:9.03:0,9,154	0/0:37,0:30:90.15:0,90,1678	0/0:28,0:24:72.24:0,72,1429	0/0:18,0:18:23.87:0,24,486	0/0:23,0:23:36.12:0,36,732	0/0:23,0:23:24.08:0,24,475	0/0:25,0:25:21.97:0,22,1170	0/0:21,1:22:52.14:0,52,1066	0/0:21,0:21:38.46:0,38,770	0/0:15,0:15:6.35:0,6,119	0/0:20,0:20:60.21:0,60,1206	0/1:14,1:15:9.71:10,0,211	0/1:22,0:22:92.75:93,0,664	0/0:31,0:31:11.05:0,11,247	0/0:26,0:26:32.28:0,32,608	1/1:8,0:8:5.96:34,6,0	0/0:4,0:4:6.02:0,6,121	0/0:17,0:17:51.11:0,51,792	0/1:21,0:21:54.75:55,0,162	0/0:40,0:40:29.27:0,29,547	0/0:18,0:18:51.16:0,51,987	0/0:26,0:26:72.09:0,72,1265	0/0:42,0:42:99:0,117,2372	0/1:13,1:14:5.04:11,0,5	0/0:23,0:23:32.31:0,32,970	0/1:23,0:23:38.25:38,0,361	0/0:4,0:3:6.02:0,6,95
chr10	80879078	.	G	GACATACACAT	10549.16	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=1.558;DP=651;FS=5.823;HRun=0;HaplotypeScore=220.9501;InbreedingCoeff=0.6789;MQ=60.40;MQ0=6;MQRankSum=-9.141;QD=22.54;ReadPosRankSum=-4.261;VQSLOD=3.1491;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:27:18.67:162,19,0	1/1:4,0:6:3.01:30,3,0	0/0:30,0:23:66.09:0,66,1087	0/0:26,0:20:57.11:0,57,1034	1/1:15,0:15:11.03:121,11,0	0/1:24,0:24:37.10:37,0,172	0/1:27,0:27:38.91:39,0,57	1/1:25,0:25:60.09:962,60,0	0/0:28,0:28:57.66:0,58,1176	1/1:2,17:25:41.68:693,42,0	1/1:1,13:18:9.03:424,9,0	0/0:21,0:21:51.63:0,52,1208	1/1:7,0:20:9.92:299,10,0	1/1:27,0:27:6.99:212,7,0	1/1:10,23:42:26.09:1082,26,0	1/1:5,23:34:36.11:1664,36,0	1/1:10,0:10:14.71:166,15,0	1/1:7,0:7:8.79:97,9,0	1/1:4,15:21:52.59:987,53,0	1/1:2,13:21:18.06:795,18,0	1/1:37,0:37:0.97:156,1,0	0/0:16,0:17:42.14:0,42,1086	0/0:19,0:22:62.26:0,62,1283	0/0:36,0:39:99:0,108,2165	1/1:2,12:19:3.48:147,3,0	1/1:5,19:31:53.64:993,54,0	1/1:19,3:24:30.57:1181,31,0	1/1:2,1:4:6.02:302,6,0
chr10	80879080	.	C	CAT	3417.95	PASS	AB=0.889;AC=34;AF=0.607;AN=56;BaseQRankSum=8.982;DP=644;FS=9.182;HRun=0;HaplotypeScore=174.2277;InbreedingCoeff=0.3259;MQ=59.00;MQ0=6;MQRankSum=-7.736;QD=7.41;ReadPosRankSum=1.454;VQSLOD=2.4061;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:27:2.94:106,0,3	1/1:6,0:6:1.44:4,1,0	0/0:30,0:22:65.97:0,66,631	0/0:26,0:19:57.01:0,57,570	1/1:16,0:16:9.75:65,10,0	1/1:1,23:24:21.35:565,21,0	0/1:4,25:29:2.55:372,0,3	0/1:24,0:24:10.47:325,0,10	0/0:28,0:28:66.49:0,66,795	1/1:25,0:25:19.27:266,19,0	1/1:16,0:16:2.43:27,2,0	0/0:20,0:20:54.49:0,54,661	1/1:17,0:17:8.70:71,9,0	1/1:27,0:27:3.66:207,4,0	1/1:38,1:41:0.13:156,0,0	1/1:33,0:34:9.38:253,9,0	0/1:11,0:11:4.35:112,0,4	0/1:7,0:7:26.13:26,0,27	1/1:21,0:21:12.54:294,13,0	1/1:19,0:20:14.16:70,14,0	1/1:35,0:35:5.06:35,5,0	0/0:16,0:16:45.08:0,45,578	0/0:22,0:22:45.28:0,45,602	0/0:41,0:41:84.28:0,84,1072	0/1:17,0:18:10.76:11,0,15	0/1:29,1:30:55.08:230,0,55	0/1:12,0:25:48.59:161,0,49	1/1:4,0:4:6.01:62,6,0
chr10	80879261	.	A	AT	15608.85	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-5.107;DP=599;FS=1.177;HRun=5;HaplotypeScore=66.6754;InbreedingCoeff=0.9978;MQ=88.28;MQ0=0;MQRankSum=-4.503;QD=34.31;ReadPosRankSum=2.060;VQSLOD=5.2135;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:48.08:593,48,0	1/1:1,13:14:39.13:513,39,0	0/0:18,0:18:48.10:0,48,499	0/0:26,0:26:60.08:0,60,616	1/1:2,26:28:81.22:1042,81,0	1/1:2,22:24:63.20:829,63,0	1/1:3,15:18:54.16:686,54,0	1/1:5,30:35:90.27:1156,90,0	0/0:19,0:19:54.14:0,54,580	1/1:0,24:24:72.20:915,72,0	1/1:2,25:27:72.19:928,72,0	0/0:21,0:21:57.14:0,57,613	1/1:1,26:27:68.92:889,69,0	1/1:1,18:19:51.12:651,51,0	1/1:1,23:24:60.16:771,60,0	1/1:3,28:31:78.25:1026,78,0	1/1:0,10:10:24.08:316,24,0	1/1:1,11:12:30.10:395,30,0	1/1:2,34:36:99:1286,99,0	1/1:0,25:25:69.19:889,69,0	1/1:0,10:10:27.09:355,27,0	0/0:25,0:25:72.16:0,72,766	0/0:15,0:15:36.08:0,36,387	0/0:20,0:20:60.15:0,60,645	1/1:0,17:17:39.08:494,39,0	1/1:1,21:22:63.20:828,63,0	1/1:0,23:23:63.16:809,63,0	1/1:3,6:9:18.06:237,18,0
chr10	80880680	.	T	TTTTTCG	14503.99	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-2.719;DP=466;FS=55.256;HRun=0;HaplotypeScore=124.3640;InbreedingCoeff=0.9099;MQ=66.59;MQ0=0;MQRankSum=-10.584;QD=54.32;ReadPosRankSum=-1.222;VQSLOD=2.7009;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:57.20:0,57,1192	1/1:3,2:5:15.02:368,15,0	0/0:20,0:16:18.31:0,18,568	0/1:15,0:13:3.71:4,0,121	1/1:13,11:24:51.16:1432,51,0	0/0:21,0:21:54.19:0,54,1170	0/0:20,0:20:51.14:0,51,1059	1/1:8,14:23:43.37:966,43,0	0/0:13,0:13:39.13:0,39,827	1/1:7,17:25:45.12:1271,45,0	1/1:4,18:22:42.14:1302,42,0	0/0:15,0:15:30.10:0,30,650	0/0:7,0:6:18.03:0,18,352	0/0:16,0:16:39.12:0,39,812	1/1:3,10:13:30.10:835,30,0	1/1:4,6:10:15.05:507,15,0	1/1:3,6:9:18.06:568,18,0	1/1:1,8:9:15.05:438,15,0	1/1:6,15:21:51.13:1170,51,0	1/1:6,16:22:51.17:1588,51,0	1/1:1,3:4:3.01:102,3,0	0/0:16,0:16:39.12:0,39,818	0/0:22,0:22:63.19:0,63,1282	0/0:22,0:22:57.16:0,57,1092	1/1:9,21:30:45.08:1443,45,0	1/1:4,10:14:39.11:1062,39,0	1/1:6,11:16:39.13:1151,39,0	1/1:2,2:4:12.02:299,12,0
chr10	80880716	.	T	TTTTTG	7690.02	PASS	AB=1.000;AC=28;AF=0.519;AN=54;BaseQRankSum=4.652;DP=491;FS=1.351;HRun=0;HaplotypeScore=221.3618;InbreedingCoeff=0.2192;MQ=53.80;MQ0=4;MQRankSum=-6.862;QD=24.26;ReadPosRankSum=0.318;VQSLOD=4.1455;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,4:22:16.14:669,16,0	1/1:6,0:6:3.39:109,3,0	0/0:28,0:18:15.18:0,15,267	0/0:39,0:24:32.09:0,32,428	0/1:25,0:25:7.57:485,0,8	1/1:16,5:21:48.12:1044,48,0	1/1:14,7:21:48.13:1090,48,0	0/0:22,0:21:12.87:0,13,139	0/0:16,0:16:45.14:0,45,804	0/1:22,0:21:41.98:233,0,42	0/1:12,0:12:28.27:28,0,39	0/0:10,0:10:24.08:0,24,460	1/1:10,4:13:30.01:681,30,0	1/1:8,8:16:42.13:1133,42,0	0/1:14,0:14:16.33:299,0,16	0/1:8,0:8:19.70:20,0,35	1/1:7,0:7:2.65:155,3,0	0/1:7,0:7:8.27:24,0,8	0/1:25,0:23:59.29:59,0,86	0/1:22,0:22:57.67:190,0,58	./.	0/0:13,0:13:24.08:0,24,431	0/0:25,0:25:60.18:0,60,1074	0/0:17,0:17:42.12:0,42,723	0/1:23,0:23:34.19:336,0,34	0/1:16,0:16:22.31:288,0,22	1/1:30,0:29:16.42:679,16,0	1/1:4,0:4:12.04:169,12,0
chr10	80880726	.	G	GT	3122.39	PASS	AB=0.979;AC=37;AF=0.661;AN=56;BaseQRankSum=12.474;DP=489;FS=0.886;HRun=9;HaplotypeScore=196.8046;InbreedingCoeff=0.5583;MQ=51.07;MQ0=4;MQRankSum=-11.134;QD=9.29;ReadPosRankSum=4.177;VQSLOD=0.5173;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:22:68.37:68,0,69	1/1:6,0:6:9.35:64,9,0	0/0:28,0:16:19.12:0,19,153	0/0:45,0:28:17.77:0,18,271	1/1:26,0:27:41.15:309,41,0	0/1:20,0:21:1.96:106,0,2	0/1:18,0:18:32.47:89,0,32	1/1:20,0:19:37.64:283,38,0	0/0:16,0:17:46.81:0,47,396	1/1:19,0:19:27.54:211,28,0	1/1:9,0:10:14.74:110,15,0	0/0:10,0:10:26.99:0,27,234	0/1:15,1:15:55.38:55,0,118	0/1:20,0:20:64.99:65,0,132	1/1:12,1:14:25.53:190,26,0	1/1:9,0:9:15.03:107,15,0	1/1:5,0:6:17.06:112,17,0	1/1:5,0:5:1.52:46,2,0	1/1:23,0:21:10.14:131,10,0	1/1:21,0:21:42.47:289,42,0	1/1:3,0:2:0.47:1,0,0	0/0:8,0:8:20.99:0,21,182	0/0:25,0:25:68.98:0,69,599	0/0:19,0:19:44.93:0,45,383	1/1:22,0:22:49.72:345,50,0	1/1:17,1:18:32.87:238,33,0	1/1:27,1:27:58.75:401,59,0	1/1:4,1:5:14.67:98,15,0
chr10	80880729	.	T	TTG	1733.17	PASS	AB=0.977;AC=20;AF=0.357;AN=56;BaseQRankSum=5.443;DP=498;FS=5.075;HRun=0;HaplotypeScore=214.7608;InbreedingCoeff=-0.4110;MQ=50.73;MQ0=4;MQRankSum=-5.071;QD=5.43;ReadPosRankSum=7.852;VQSLOD=1.7474;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,1:23:99:245,0,136	0/1:6,0:6:20.66:26,0,21	0/0:30,0:17:34.73:0,35,403	0/0:44,0:28:38.81:0,39,564	0/1:28,0:28:3.43:3,0,154	0/1:20,1:21:99:406,0,108	0/1:17,1:18:84.47:387,0,84	0/0:20,0:19:49.81:0,50,293	0/0:17,0:17:51.13:0,51,733	0/1:22,0:21:58.34:58,0,115	0/1:11,0:11:9.25:9,0,62	0/0:10,0:10:30.09:0,30,437	0/1:16,1:16:99:160,0,260	0/1:17,2:19:99:195,0,259	0/1:13,0:14:19.57:20,0,94	0/1:8,0:8:10.60:11,0,62	0/1:6,0:6:16.73:40,0,17	0/1:4,0:4:8.38:8,0,54	0/1:22,0:20:13.79:14,0,107	0/1:21,0:21:13.36:13,0,130	0/0:3,0:2:3.85:0,4,21	0/0:10,0:10:27.06:0,27,371	0/0:25,0:25:75.24:0,75,1109	0/0:19,0:19:54.13:0,54,757	0/1:22,0:22:55.30:55,0,137	0/1:22,0:22:53.52:54,0,141	0/1:26,0:27:85.96:150,0,86	1/1:5,0:5:3.53:37,4,0
chr10	80880732	.	T	TG	3877.75	PASS	AB=0.687;AC=17;AF=0.304;AN=56;BaseQRankSum=8.493;DP=481;FS=2.910;HRun=0;HaplotypeScore=197.3811;InbreedingCoeff=-0.0459;MQ=53.52;MQ0=4;MQRankSum=-8.916;QD=16.93;ReadPosRankSum=2.984;VQSLOD=4.4719;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:42.06:0,42,316	0/1:3,3:6:6.82:89,0,7	0/0:32,0:19:36.10:0,36,401	0/0:42,0:26:47.77:0,48,563	0/1:17,11:28:82.61:410,0,83	0/0:20,0:20:51.51:0,52,322	0/0:18,0:18:45.07:0,45,295	1/1:8,10:17:2.53:417,3,0	0/0:16,0:16:48.07:0,48,645	0/1:13,11:23:85.46:301,0,85	0/1:3,5:8:8.32:131,0,8	0/0:10,0:10:30.09:0,30,404	0/0:17,0:16:33.86:0,34,407	0/0:19,0:19:52.73:0,53,477	0/1:7,5:12:31.33:236,0,31	0/1:4,4:8:46.95:133,0,47	0/1:4,2:6:1.94:104,0,2	0/1:1,3:4:20.31:106,0,20	0/1:12,6:16:65.80:208,0,66	0/1:10,10:20:26.97:350,0,27	0/0:2,1:2:5.91:0,6,37	0/0:10,0:10:30.04:0,30,365	0/0:24,0:24:72.23:0,72,987	0/0:18,0:18:54.13:0,54,700	1/1:3,16:19:22.13:542,22,0	0/1:13,9:22:99:336,0,146	0/1:16,12:27:71.31:424,0,71	0/1:5,3:8:6.21:90,0,6
chr10	80880736	.	G	GTTTTTTT	11141.56	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=13.544;DP=472;FS=21.770;HRun=9;HaplotypeScore=223.7635;InbreedingCoeff=0.4912;MQ=54.98;MQ0=2;MQRankSum=-12.677;QD=31.65;ReadPosRankSum=0.523;VQSLOD=0.0724;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:18:76.68:77,0,227	1/1:4,2:6:12.03:276,12,0	0/1:32,0:19:12.55:13,0,433	0/0:39,0:26:46.54:0,47,754	1/1:23,1:26:64.37:1251,64,0	0/1:20,0:20:54.98:507,0,55	0/1:19,0:19:73.83:74,0,217	1/1:17,0:16:46.66:548,47,0	0/0:16,0:16:45.15:0,45,1082	1/1:20,4:22:53.63:908,54,0	1/1:9,0:9:20.94:291,21,0	0/0:11,0:11:30.08:0,30,611	0/1:15,0:14:25.57:26,0,406	0/1:19,0:19:15.15:15,0,436	1/1:10,1:12:35.98:814,36,0	1/1:8,1:9:26.89:344,27,0	1/1:6,0:6:18.03:415,18,0	1/1:3,1:4:12:219,12,0	1/1:18,0:16:33.12:356,33,0	1/1:17,1:19:51.07:826,51,0	0/0:3,0:2:0.67:0,1,7	0/0:9,0:9:27.08:0,27,584	0/0:27,0:27:81.23:0,81,1773	0/0:15,0:15:42.14:0,42,963	1/1:11,5:19:54.09:1166,54,0	1/1:19,2:22:59.33:901,59,0	1/1:20,6:27:79.06:1741,79,0	1/1:5,2:8:20.50:375,20,0
chr10	80880759	.	G	GTTTTTT	5107.02	PASS	AB=0.928;AC=16;AF=0.286;AN=56;BaseQRankSum=8.454;DP=402;FS=16.958;HRun=1;HaplotypeScore=180.2597;InbreedingCoeff=-0.2363;MQ=60.07;MQ0=1;MQRankSum=-8.763;QD=31.33;ReadPosRankSum=3.534;VQSLOD=0.1901;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:33.67:0,34,375	0/1:5,1:6:22.71:212,0,23	0/0:31,0:22:39.28:0,39,910	0/0:34,0:29:54.26:0,54,913	0/1:17,0:20:12.83:776,0,13	0/0:15,0:15:38.94:0,39,378	0/0:18,0:18:41.54:0,42,381	0/1:9,0:9:99:134,0,117	0/0:14,0:14:42.14:0,42,934	0/1:19,1:19:65.82:860,0,66	0/1:4,0:5:30.24:179,0,30	0/0:15,0:15:45.15:0,45,988	0/0:15,0:16:29.68:0,30,346	0/0:18,0:18:44.78:0,45,407	1/1:11,1:12:3.02:256,3,0	0/1:7,0:7:4.42:169,0,4	0/1:6,0:6:16.74:240,0,17	0/1:3,0:3:25.56:115,0,26	0/1:8,0:8:36.75:224,0,37	0/1:11,0:11:80.32:274,0,80	0/0:2,0:2:2.92:0,3,18	0/0:8,0:8:21.04:0,21,396	0/0:25,0:25:72.21:0,72,1584	0/0:22,0:22:57.11:0,57,1091	0/1:9,1:12:96.10:257,0,96	0/1:16,2:19:99:518,0,109	0/1:17,2:19:99:632,0,102	0/1:5,1:6:23.25:261,0,23
chr10	80880761	.	C	CTT	6082.87	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=7.951;DP=427;FS=11.875;HRun=8;HaplotypeScore=158.7898;InbreedingCoeff=0.9196;MQ=60.12;MQ0=1;MQRankSum=-9.097;QD=22.61;ReadPosRankSum=1.478;VQSLOD=2.5331;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,12:17:39.65:526,40,0	1/1:3,0:7:11.99:108,12,0	0/0:35,0:23:45.22:0,45,433	0/0:40,0:32:18.57:0,19,432	1/1:14,0:24:56.03:518,56,0	1/1:1,13:15:35.61:532,36,0	1/1:0,16:16:45.15:704,45,0	1/1:8,0:9:7.25:57,7,0	0/0:15,0:15:36.07:0,36,401	1/1:9,0:19:44.66:413,45,0	1/1:4,0:6:12.02:123,12,0	0/0:16,0:16:39.08:0,39,435	1/1:4,12:17:41.73:628,42,0	1/1:1,16:18:41.63:627,42,0	1/1:6,0:10:14.72:146,15,0	1/1:5,0:8:16.04:126,16,0	1/1:4,0:7:14.24:122,14,0	1/1:2,0:4:8.93:74,9,0	1/1:8,0:11:21.92:204,22,0	1/1:7,0:11:20.99:204,21,0	0/1:2,0:2:0:0,0,0	0/0:4,0:6:14.51:0,15,124	0/0:25,0:25:63.15:0,63,698	0/0:21,0:21:54.09:0,54,587	1/1:13,0:16:29.72:253,30,0	1/1:15,0:19:28.66:239,29,0	1/1:18,0:22:36.07:326,36,0	1/1:4,0:7:17.91:152,18,0
chr10	80880818	.	T	TG	2086.23	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=5.368;DP=444;FS=30.564;HRun=1;HaplotypeScore=96.0537;InbreedingCoeff=0.8658;MQ=63.80;MQ0=19;MQRankSum=-3.254;QD=12.20;ReadPosRankSum=2.028;VQSLOD=0.7584;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:17:42.12:0,42,531	1/1:5,2:7:6:89,6,0	0/0:53,0:26:35.35:0,35,725	0/0:47,0:22:52:0,52,618	1/1:15,2:12:8.66:80,9,0	0/0:14,0:14:35.14:0,35,434	0/0:21,0:20:51.03:0,51,632	1/1:13,0:9:26.79:232,27,0	0/0:11,0:11:33.08:0,33,406	1/1:16,1:15:27.34:255,27,0	1/1:9,0:8:17.86:160,18,0	0/0:19,0:19:54.16:0,54,684	0/0:9,0:8:21.07:0,21,271	0/0:18,0:18:39.11:0,39,491	1/1:7,1:7:12.02:136,12,0	1/1:3,2:5:11.88:85,12,0	1/1:13,4:16:38.40:336,38,0	0/1:10,0:10:7.56:61,0,8	1/1:7,1:6:8.82:90,9,0	1/1:14,2:16:32.54:305,33,0	1/1:13,1:12:14.58:117,15,0	0/0:17,0:17:43.66:0,44,530	0/0:17,0:17:36.12:0,36,464	0/0:20,0:19:47.64:0,48,593	1/1:9,2:10:14.74:110,15,0	1/1:10,0:8:16.46:128,16,0	1/1:9,0:8:17.44:125,17,0	0/0:5,0:4:2.59:0,3,10
chr10	80880819	.	GTGTT	G	3020.65	PASS	AB=0.846;AC=24;AF=0.429;AN=56;BaseQRankSum=-0.342;DP=444;FS=44.912;HRun=0;HaplotypeScore=99.0260;InbreedingCoeff=0.5340;MQ=61.63;MQ0=20;MQRankSum=-1.888;QD=17.66;ReadPosRankSum=3.281;VQSLOD=1.4046;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:17:45.10:0,45,1051	0/0:4,2:6:3.84:0,4,10	0/0:52,0:23:31.02:0,31,1257	0/0:47,0:22:54:0,54,1073	1/1:12,4:12:0.49:111,0,0	0/0:14,0:14:35.80:0,36,731	0/0:21,0:20:50.81:0,51,845	1/1:4,9:9:27.04:422,27,0	0/0:12,0:12:36.12:0,36,757	0/1:13,2:13:0.71:476,0,1	1/1:6,2:7:12.22:227,12,0	0/0:19,0:19:57.19:0,57,1282	0/0:9,0:8:21.07:0,21,480	0/0:18,0:18:39.12:0,39,905	1/1:6,2:8:10.45:142,10,0	0/1:4,1:5:12.59:70,0,13	0/1:17,0:18:51.82:292,0,52	0/1:10,0:10:7.32:7,0,85	1/1:5,3:6:9.03:164,9,0	0/1:10,3:17:2.08:249,0,2	1/1:9,1:11:4.87:155,5,0	0/0:18,0:18:45.98:0,46,999	0/0:16,0:16:39.01:0,39,837	0/0:21,0:20:51.05:0,51,1034	1/1:7,4:11:6.47:151,6,0	1/1:6,3:9:23.91:395,24,0	1/1:5,3:8:18.06:306,18,0	0/1:4,1:5:18.04:46,0,18
chr10	80880821	.	GT	G	1934.93	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=4.441;DP=451;FS=2.253;HRun=2;HaplotypeScore=87.3653;InbreedingCoeff=0.8648;MQ=61.03;MQ0=23;MQRankSum=-2.070;QD=10.75;ReadPosRankSum=1.160;VQSLOD=1.9165;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:17:45.06:0,45,534	1/1:7,0:7:11.95:93,12,0	0/0:48,0:20:44.17:0,44,672	0/0:47,0:22:49.97:0,50,620	1/1:12,5:12:11.84:108,12,0	0/0:14,0:14:33.03:0,33,393	0/0:22,0:21:46.99:0,47,482	1/1:13,0:9:18.29:97,18,0	0/0:11,0:11:30.06:0,30,411	1/1:13,3:14:24.50:314,24,0	1/1:9,0:8:20.71:163,21,0	0/0:19,0:19:57.15:0,57,749	0/0:9,0:8:18.06:0,18,237	0/0:17,0:17:36.10:0,36,428	1/1:7,2:8:12:108,12,0	1/1:2,3:5:8.64:53,9,0	1/1:18,3:20:3.88:281,4,0	1/1:8,1:10:12.32:148,12,0	1/1:8,0:6:7.59:46,8,0	1/1:13,4:17:33.15:280,33,0	1/1:11,5:14:0.83:122,1,0	0/0:18,0:18:47.72:0,48,596	0/0:17,0:16:38.54:0,39,477	0/0:20,1:20:8.60:0,9,479	1/1:10,3:11:11.69:96,12,0	1/1:9,1:8:20.10:131,20,0	1/1:8,1:8:17.24:111,17,0	0/0:7,0:5:2.04:0,2,42
chr10	80880822	.	T	TG	2300.42	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=4.112;DP=463;FS=3.647;HRun=1;HaplotypeScore=93.8376;InbreedingCoeff=0.8964;MQ=60.41;MQ0=23;MQRankSum=-3.360;QD=12.30;ReadPosRankSum=0.540;VQSLOD=2.3189;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:17:39.42:0,39,350	1/1:5,2:7:12:140,12,0	0/0:49,0:20:44.17:0,44,672	0/0:46,0:22:49.50:0,49,619	1/1:16,2:13:11.86:113,12,0	0/0:13,0:16:30.97:0,31,402	0/0:19,1:23:46.61:0,47,539	1/1:14,0:10:21.30:134,21,0	0/0:12,0:12:30.05:0,30,401	1/1:16,1:15:27.81:364,28,0	1/1:10,0:9:22.77:179,23,0	0/0:20,0:20:57.12:0,57,723	0/0:8,0:7:17.92:0,18,215	0/0:17,0:17:32.66:0,33,242	1/1:9,0:8:12.01:133,12,0	1/1:5,0:5:8.83:60,9,0	1/1:17,5:21:10.39:412,10,0	1/1:9,1:10:12.66:154,13,0	1/1:7,0:5:5.77:41,6,0	1/1:16,2:18:33.28:336,33,0	1/1:15,1:14:0.59:122,1,0	0/0:18,0:19:44.96:0,45,530	0/0:14,0:16:39.08:0,39,491	0/0:19,0:19:9:0,9,493	1/1:12,1:11:11.69:101,12,0	1/1:11,0:9:13.14:118,13,0	1/1:9,1:9:18.13:114,18,0	0/0:7,0:5:11.06:0,11,69
chr10	80880836	.	G	GTGTT	1436.87	PASS	AB=0.996;AC=12;AF=0.214;AN=56;BaseQRankSum=0.362;DP=474;FS=14.499;HRun=0;HaplotypeScore=108.0044;InbreedingCoeff=0.2860;MQ=48.69;MQ0=29;MQRankSum=1.967;QD=8.03;ReadPosRankSum=2.225;VQSLOD=1.8573;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,3:21:42.37:609,42,0	0/1:8,0:8:6.14:6,0,16	0/1:36,0:7:5.41:5,0,138	0/0:37,0:13:16.61:0,17,193	0/0:19,0:14:0.30:0,0,59	0/0:17,0:17:29.41:0,29,242	0/0:22,0:21:46.37:0,46,365	0/0:11,0:7:20.76:0,21,143	0/0:12,0:12:17.66:0,18,312	0/1:17,0:15:18.51:19,0,183	0/0:10,0:9:16.73:0,17,121	0/0:16,0:16:41.97:0,42,467	1/1:11,0:10:18.47:201,18,0	1/1:13,6:18:29.17:696,29,0	0/0:10,0:9:11.36:0,11,85	0/0:7,0:7:1.28:0,1,62	0/1:26,0:25:35.67:36,0,219	0/0:13,0:13:0.08:0,0,121	0/0:12,0:8:14.52:0,15,105	0/1:21,0:21:14:14,0,170	0/0:18,0:16:0.94:0,1,89	0/0:19,0:18:9.36:0,9,409	0/0:16,0:15:29.97:0,30,287	0/0:25,0:24:48.24:0,48,482	0/1:16,0:13:6.34:6,0,7	0/0:12,0:10:29.66:0,30,236	0/0:12,0:11:23.57:0,24,152	0/0:7,0:5:15.02:0,15,197
chr10	80881553	.	A	AC	14633.74	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=4.462;DP=672;FS=1.259;HRun=1;HaplotypeScore=81.4677;InbreedingCoeff=0.9874;MQ=89.87;MQ0=0;MQRankSum=-2.647;QD=40.42;ReadPosRankSum=-0.182;VQSLOD=5.1631;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.22:0,87,1082	1/1:0,10:10:27.09:404,27,0	0/0:19,0:19:57.06:0,57,675	0/0:31,0:31:72.36:0,72,1069	1/1:0,29:29:75.25:1124,75,0	0/0:20,0:20:60.20:0,60,779	0/0:20,0:20:54.18:0,54,701	1/1:1,26:27:78.22:1102,78,0	0/0:25,1:26:33.32:0,33,929	1/1:0,27:27:81.27:1213,81,0	1/1:0,23:23:54.18:809,54,0	0/0:23,0:23:69.21:0,69,879	0/0:30,0:30:87.28:0,87,1129	0/0:26,0:26:75.24:0,75,972	1/1:0,26:26:72.24:1079,72,0	1/1:0,24:24:60.20:899,60,0	1/1:0,18:18:48.16:719,48,0	1/1:0,5:5:12.04:180,12,0	1/1:0,25:25:75.24:1103,75,0	1/1:2,28:30:78.26:1169,78,0	1/1:0,31:31:81.27:1213,81,0	0/0:29,0:29:81.25:0,81,1037	0/0:24,0:24:66.21:0,66,856	0/0:31,0:31:93.29:0,93,1192	1/1:1,17:18:45.15:674,45,0	1/1:0,23:23:69.22:1015,69,0	1/1:1,42:43:99:1796,120,0	1/1:0,3:3:9.03:135,9,0
chr10	80882830	.	G	GT	7554.02	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=8.158;DP=453;FS=3.436;HRun=9;HaplotypeScore=59.4740;InbreedingCoeff=0.9342;MQ=76.41;MQ0=0;MQRankSum=-2.105;QD=25.69;ReadPosRankSum=0.245;VQSLOD=5.5456;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:23.95:0,24,203	1/1:1,5:7:11.87:114,12,0	0/0:11,0:11:26.95:0,27,228	0/0:8,0:9:10.96:0,11,126	1/1:6,31:38:72.93:978,73,0	0/0:17,0:17:44.98:0,45,390	0/0:10,0:10:20.98:0,21,182	1/1:9,21:29:62.95:644,63,0	0/0:14,0:14:29.97:0,30,260	1/1:4,11:15:36.10:397,36,0	1/1:0,24:24:66.18:730,66,0	0/0:12,0:12:32.97:0,33,283	0/0:19,0:19:50.98:0,51,443	0/0:8,0:8:17.98:0,18,156	1/1:3,10:13:4.02:273,4,0	1/1:3,15:18:45.12:498,45,0	1/1:2,10:12:24.06:265,24,0	1/1:1,19:20:51.14:563,51,0	1/1:2,18:20:54.11:578,54,0	1/1:2,21:23:60.16:664,60,0	1/1:0,4:4:12.03:133,12,0	0/0:22,0:22:62.98:0,63,547	0/0:22,0:22:62.99:0,63,547	0/0:4,0:4:12:0,12,104	1/1:5,24:29:44.38:707,44,0	1/1:4,10:15:29.91:313,30,0	1/1:5,19:25:63:676,63,0	1/1:1,0:1:2.99:23,3,0
chr10	80884105	.	GA	G	4368.54	PASS	AB=0.732;AC=40;AF=0.714;AN=56;BaseQRankSum=8.263;DP=489;FS=6.078;HRun=14;HaplotypeScore=90.0995;InbreedingCoeff=0.5097;MQ=73.25;MQ0=2;MQRankSum=-0.536;QD=10.81;ReadPosRankSum=4.651;VQSLOD=4.5181;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:62.40:431,62,0	1/1:3,3:6:11.86:79,12,0	0/1:16,2:14:36.79:37,0,72	0/1:18,1:17:6.34:6,0,88	1/1:3,19:22:22.64:301,23,0	1/1:5,11:16:17.44:208,17,0	1/1:6,19:25:44.45:375,44,0	1/1:9,13:22:10.77:219,11,0	0/0:17,0:17:40.28:0,40,361	1/1:6,14:20:18.89:248,19,0	0/1:11,9:20:30.23:166,0,30	0/0:11,1:14:9.69:0,10,166	1/1:4,15:19:46.54:313,47,0	1/1:2,8:10:20.80:144,21,0	0/1:7,11:18:3.55:102,0,4	1/1:4,9:13:23.72:164,24,0	1/1:3,12:16:17.64:230,18,0	1/1:5,9:14:26.75:185,27,0	1/1:5,13:19:12.76:223,13,0	0/1:12,11:23:2.16:137,0,2	0/1:5,7:12:7.45:102,0,7	0/0:12,0:13:34.11:0,34,291	0/0:21,0:21:46.27:0,46,413	0/0:17,0:20:35.65:0,36,351	1/1:8,13:21:14.41:222,14,0	1/1:7,8:16:28.67:190,29,0	1/1:9,11:20:7.77:198,8,0	1/1:0,5:6:13.94:88,14,0
chr10	80884225	.	GGAGAGAGA	G	384.08	PASS	AB=0.909;AC=7;AF=0.135;AN=52;BaseQRankSum=4.365;DP=430;FS=26.392;HRun=0;HaplotypeScore=105.9378;InbreedingCoeff=0.6140;MQ=58.70;MQ0=13;MQRankSum=-4.307;QD=7.25;ReadPosRankSum=1.417;VQSLOD=-0.1259;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:13:2.95:20,3,0	0/0:6,0:6:3.01:0,3,93	./.	./.	0/0:23,0:23:12.04:0,12,379	0/0:16,0:18:21.03:0,21,362	0/0:16,0:16:9.50:0,10,184	0/0:20,0:20:6.02:0,6,117	0/0:9,0:8:9.03:0,9,222	0/0:18,0:18:15.05:0,15,377	0/0:14,0:14:18.06:0,18,543	0/1:9,0:10:3.84:4,0,169	1/1:16,4:18:12.04:297,12,0	1/1:4,5:9:9.03:185,9,0	0/0:12,0:12:18.03:0,18,404	0/0:8,0:9:21.07:0,21,663	0/0:18,0:18:21.07:0,21,705	0/0:17,0:17:29.99:0,30,758	0/0:13,0:13:21.02:0,21,500	0/0:21,0:21:11.14:0,11,671	0/0:9,0:9:12.03:0,12,303	0/0:13,0:13:9.03:0,9,218	0/0:13,0:13:15.05:0,15,446	0/0:11,0:11:15.05:0,15,582	0/0:20,0:20:24.05:0,24,664	0/0:15,0:15:18.06:0,18,382	0/0:23,0:24:36.99:0,37,1080	0/0:8,0:7:15.05:0,15,388
chr10	80885237	.	T	TGA	18703.29	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=3.353;DP=638;FS=3.432;HRun=0;HaplotypeScore=95.2904;InbreedingCoeff=0.9899;MQ=74.92;MQ0=0;MQRankSum=-2.336;QD=49.22;ReadPosRankSum=0.400;VQSLOD=5.5533;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.19:0,60,854	1/1:0,9:9:21.07:393,21,0	0/0:20,0:20:54.17:0,54,753	0/0:4,0:4:8.86:0,9,132	1/1:4,22:26:57.20:1063,57,0	0/0:26,0:26:78.26:0,78,1147	0/0:17,0:17:51.17:0,51,747	1/1:1,32:33:99:1769,99,0	0/0:20,0:20:57.19:0,57,840	1/1:1,20:21:63.17:1125,63,0	1/1:1,21:22:54.19:1011,54,0	0/0:23,0:23:69.23:0,69,1016	0/0:32,0:32:96.32:0,96,1413	0/0:18,0:18:51.17:0,51,747	1/1:1,29:30:75.26:1404,75,0	1/1:0,23:23:63.22:1180,63,0	1/1:0,24:24:69.24:1293,69,0	1/1:1,7:8:21.07:393,21,0	1/1:2,22:25:69.22:1261,69,0	1/1:2,47:49:99:2412,129,0	1/1:5,18:24:54.18:963,54,0	0/0:33,0:33:96.32:0,96,1414	0/0:29,0:28:87.29:0,87,1278	0/0:16,0:16:48.15:0,48,688	1/1:1,23:24:66.23:1236,66,0	1/1:1,19:20:57.20:1068,57,0	1/1:1,31:34:93.32:1738,93,0	1/1:1,7:8:21.07:393,21,0
chr10	80886469	.	A	AG	6819.18	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-0.358;DP=456;FS=2.309;HRun=5;HaplotypeScore=62.6018;InbreedingCoeff=0.9783;MQ=76.23;MQ0=1;MQRankSum=-3.347;QD=30.58;ReadPosRankSum=-0.721;VQSLOD=5.1678;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.16:0,69,733	1/1:0,7:7:18.06:236,18,0	0/0:28,0:27:55.72:0,56,667	0/0:14,0:13:35.94:0,36,342	1/1:1,9:10:12:138,12,0	0/0:15,0:15:42.10:0,42,449	0/0:23,0:23:63.16:0,63,676	1/1:3,19:22:54.16:691,54,0	0/0:11,0:11:33.08:0,33,355	1/1:3,10:13:27.07:337,27,0	1/1:0,3:3:9.03:118,9,0	0/0:17,0:17:45.11:0,45,483	0/0:24,0:24:69.17:0,69,741	0/0:17,0:17:45.09:0,45,475	1/1:3,20:23:57.19:750,57,0	1/1:1,18:19:48.16:631,48,0	1/1:3,22:25:56.53:749,57,0	1/1:0,15:15:42.14:553,42,0	1/1:0,7:7:21.05:259,21,0	1/1:1,9:10:21.03:257,21,0	1/1:1,24:25:56.74:731,57,0	0/0:16,0:16:36.07:0,36,379	0/0:12,0:12:36.09:0,36,386	0/0:31,0:31:90.23:0,90,967	1/1:2,4:6:15.04:185,15,0	1/1:2,8:10:24.08:316,24,0	1/1:3,20:23:54.18:711,54,0	1/1:0,5:5:12.04:158,12,0
chr10	80886572	.	G	GT	7294.85	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=12.682;DP=425;FS=0.000;HRun=6;HaplotypeScore=75.7441;InbreedingCoeff=0.8645;MQ=64.38;MQ0=0;MQRankSum=-13.468;QD=29.53;ReadPosRankSum=-2.904;VQSLOD=4.1367;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.12:0,72,726	1/1:1,5:6:15.05:189,15,0	0/1:12,0:11:2.01:2,0,149	0/1:10,0:8:3.13:3,0,96	1/1:2,14:16:45.14:566,45,0	0/0:16,0:16:48.11:0,48,490	0/0:13,0:13:33.07:0,33,337	1/1:6,10:16:39.12:479,39,0	0/0:10,0:10:30.07:0,30,306	1/1:1,16:17:48.15:603,48,0	1/1:4,15:19:48.14:590,48,0	0/0:19,0:19:57.13:0,57,582	0/0:20,0:20:60.14:0,60,612	0/0:22,0:22:60.09:0,60,596	1/1:3,16:19:48.15:603,48,0	1/1:1,11:12:36.12:453,36,0	1/1:0,5:5:15.05:189,15,0	1/1:2,2:4:6.02:75,6,0	1/1:4,12:16:39.11:477,39,0	1/1:4,21:25:72.23:903,72,0	1/1:2,6:8:12:133,12,0	0/0:18,0:18:48.11:0,48,490	0/0:21,0:21:63.14:0,63,643	0/0:13,0:13:36.08:0,36,367	1/1:4,19:23:66.21:828,66,0	1/1:5,12:17:14.53:486,15,0	1/1:2,18:20:51.16:641,51,0	1/1:0,2:2:6.02:75,6,0
chr10	80886584	.	A	AT	6926.96	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=9.831;DP=419;FS=0.000;HRun=6;HaplotypeScore=75.8362;InbreedingCoeff=0.8857;MQ=61.17;MQ0=0;MQRankSum=-12.962;QD=29.60;ReadPosRankSum=-1.927;VQSLOD=4.5838;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.15:0,66,673	1/1:1,4:5:14.97:156,15,0	0/0:10,0:9:20.99:0,21,201	0/1:12,0:10:31.96:32,0,87	1/1:1,20:21:51.12:623,51,0	0/0:16,0:16:42.10:0,42,429	0/0:8,0:8:21.03:0,21,208	1/1:4,9:13:27.09:339,27,0	0/0:12,0:12:36.08:0,36,367	1/1:3,15:18:48.15:593,48,0	1/1:2,17:19:45.14:565,45,0	0/0:18,0:18:54.12:0,54,551	0/0:25,0:25:66.14:0,66,668	0/0:20,0:20:54.10:0,54,544	1/1:2,14:16:45.13:553,45,0	1/1:0,12:12:33.11:415,33,0	1/1:3,5:8:18.06:226,18,0	1/1:1,3:4:9.03:113,9,0	1/1:3,10:13:36.08:435,36,0	1/1:3,25:28:75.23:933,75,0	1/1:2,3:5:6.02:75,6,0	0/0:21,0:21:60.13:0,60,611	0/0:20,0:20:60.13:0,60,607	0/0:11,0:11:33.08:0,33,337	1/1:3,17:20:57.14:687,57,0	1/1:4,12:16:8.48:406,8,0	1/1:0,19:19:51.16:641,51,0	1/1:4,1:5:12.02:135,12,0
chr10	80886692	.	A	AC	7094.49	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=1.111;DP=317;FS=0.515;HRun=5;HaplotypeScore=42.1208;InbreedingCoeff=0.9521;MQ=76.80;MQ0=1;MQRankSum=-3.221;QD=29.56;ReadPosRankSum=2.013;VQSLOD=4.9439;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,16:20:55.88:699,56,0	1/1:0,3:3:9.03:118,9,0	0/0:14,0:14:38.96:0,39,379	0/0:10,0:10:24.05:0,24,247	1/1:2,11:13:33.11:433,33,0	1/1:0,11:11:27.09:355,27,0	1/1:0,14:14:36.12:474,36,0	1/1:1,7:8:18.06:237,18,0	0/0:9,0:9:27.05:0,27,281	1/1:1,8:9:21.07:272,21,0	1/1:0,8:8:21.07:276,21,0	0/0:12,0:12:36.09:0,36,383	1/1:0,12:12:24.08:316,24,0	1/1:0,19:19:36.12:473,36,0	1/1:0,12:12:30.10:395,30,0	1/1:1,7:8:18.06:236,18,0	1/1:2,19:21:19.34:599,19,0	1/1:1,12:13:33.58:435,34,0	1/1:6,7:13:32.93:394,33,0	1/1:0,6:6:15.05:192,15,0	1/1:2,15:16:27.09:355,27,0	0/0:12,0:12:36.09:0,36,385	0/0:13,0:13:39.07:0,39,402	0/0:7,0:7:21.03:0,21,217	1/1:2,6:8:15.05:197,15,0	1/1:4,12:16:33.08:410,33,0	1/1:2,5:7:12.04:150,12,0	1/1:0,2:2:6.02:79,6,0
chr10	80887222	.	GACACACACACACACAC	G	9567.01	PASS	AB=0.770;AC=38;AF=0.731;AN=52;BaseQRankSum=9.764;DP=716;FS=5.590;HRun=0;HaplotypeScore=293.1911;InbreedingCoeff=0.4999;MQ=50.57;MQ0=15;MQRankSum=-7.286;QD=17.02;ReadPosRankSum=1.765;VQSLOD=3.0178;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:66:10.12:234,10,0	1/1:3,8:10:8.17:394,8,0	./.	./.	1/1:11,15:27:9.97:361,10,0	0/1:9,1:21:63.62:149,0,64	0/1:21,0:23:59.86:220,0,60	1/1:20,0:28:11.54:115,12,0	0/0:22,0:22:36.03:0,36,1808	1/1:12,19:32:37.87:1144,38,0	1/1:7,9:16:0.94:2,1,0	0/0:16,0:16:24.08:0,24,987	1/1:18,0:30:24.08:813,24,0	1/1:10,0:27:16.62:565,17,0	1/1:18,19:37:25.41:1144,25,0	1/1:11,14:26:20.80:857,21,0	1/1:16,12:28:9:231,9,0	1/1:9,12:21:2.39:131,2,0	0/1:14,1:16:50.22:212,0,50	0/1:14,13:27:22:406,0,22	1/1:32,0:30:0.89:2,1,0	0/0:17,0:15:21.07:0,21,1069	0/0:19,0:18:30.10:0,30,1498	0/0:34,0:37:66.18:0,66,3364	1/1:8,14:21:12.04:429,12,0	1/1:11,12:22:36.09:866,36,0	1/1:17,13:32:14.12:632,14,0	1/1:2,10:10:15.05:660,15,0
chr10	80889638	.	T	TC	2541.86	PASS	AB=0.671;AC=17;AF=0.304;AN=56;BaseQRankSum=12.087;DP=470;FS=9.864;HRun=0;HaplotypeScore=164.6633;InbreedingCoeff=-0.0811;MQ=59.51;MQ0=0;MQRankSum=-9.569;QD=9.21;ReadPosRankSum=6.474;VQSLOD=3.1926;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:49.60:0,50,373	0/1:3,6:9:25.07:99,0,25	0/0:14,0:14:39.07:0,39,465	0/0:8,0:8:18.03:0,18,205	0/1:15,20:35:81.46:285,0,81	0/0:15,0:15:40.66:0,41,316	0/0:10,0:10:26.03:0,26,171	0/1:18,6:24:99:131,0,156	0/0:17,0:17:51.16:0,51,694	0/1:9,11:20:31.04:233,0,31	0/1:9,15:24:60.77:222,0,61	0/0:17,0:17:48.15:0,48,653	0/0:14,0:14:37.82:0,38,323	0/0:20,0:20:54.72:0,55,398	0/1:7,17:24:24.79:283,0,25	0/1:6,5:11:55.80:76,0,56	0/1:7,4:11:13.24:68,0,13	0/1:3,4:7:5.41:72,0,5	0/1:10,2:12:31.18:31,0,52	0/1:12,13:25:55.65:213,0,56	0/0:4,0:4:3.35:0,3,16	0/0:26,0:26:75.22:0,75,1013	0/0:17,0:17:51.16:0,51,698	0/0:14,0:14:42.14:0,42,587	1/1:1,17:18:35.18:341,35,0	0/1:8,11:19:20.49:229,0,20	0/1:13,17:30:99:299,0,99	1/1:2,5:7:18.33:129,18,0
chr10	80889639	.	A	ATTTTAAGG	34670.30	PASS	AB=0.697;AC=34;AF=0.607;AN=56;BaseQRankSum=9.368;DP=561;FS=6.800;HRun=0;HaplotypeScore=188.5660;InbreedingCoeff=0.5310;MQ=56.21;MQ0=0;MQRankSum=-16.101;QD=78.80;ReadPosRankSum=6.504;VQSLOD=4.1410;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:22:8.89:1399,9,0	1/1:6,6:12:33.11:1067,33,0	0/0:15,0:15:35.25:0,35,710	0/0:8,0:8:17.95:0,18,390	0/1:23,19:43:99:2793,0,130	1/1:13,0:24:21.29:1936,21,0	0/1:5,0:14:34.23:916,0,34	1/1:25,6:31:19.43:2377,19,0	0/0:16,0:16:48.16:0,48,1310	0/1:16,12:28:6.06:2172,0,6	1/1:15,15:29:58.19:2323,58,0	0/0:18,0:18:51.15:0,51,1363	0/1:6,0:15:2.97:1134,0,3	1/1:9,0:26:24.45:1902,24,0	1/1:10,17:27:9.28:2301,9,0	1/1:8,5:13:18.27:1177,18,0	1/1:8,4:12:15.12:948,15,0	0/1:4,4:8:16.06:543,0,16	0/1:16,2:18:19.47:1124,0,19	1/1:18,13:31:25.18:2390,25,0	0/0:5,0:5:5.93:0,6,44	0/0:26,0:26:75.24:0,75,2070	0/0:19,0:19:51.13:0,51,1304	0/0:14,0:14:42.14:0,42,1202	1/1:3,17:20:60.21:2214,60,0	1/1:13,11:24:69.22:2306,69,0	1/1:17,17:34:40.05:2883,40,0	1/1:3,5:8:3.60:764,4,0
chr10	80891244	.	A	AC	11918.82	PASS	AB=0.591;AC=37;AF=0.661;AN=56;BaseQRankSum=-8.748;DP=573;FS=2.230;HRun=7;HaplotypeScore=61.6416;InbreedingCoeff=0.9295;MQ=71.40;MQ0=3;MQRankSum=-0.020;QD=28.38;ReadPosRankSum=2.458;VQSLOD=5.6611;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,37:39:87.26:1051,87,0	1/1:1,9:10:23.45:288,23,0	0/0:16,0:11:19.72:0,20,146	0/0:21,0:16:45.03:0,45,420	1/1:1,23:24:54.17:652,54,0	0/0:22,0:22:54.08:0,54,521	0/0:20,0:20:45.06:0,45,434	1/1:5,19:24:60.10:690,60,0	0/0:22,0:22:57.05:0,57,538	1/1:1,24:25:63.14:742,63,0	1/1:2,29:31:75.13:867,75,0	0/0:14,0:14:42.04:0,42,394	1/1:2,26:28:75.23:906,75,0	1/1:0,15:15:39.12:471,39,0	1/1:2,19:21:51.16:616,51,0	0/1:4,9:13:7.91:196,0,8	1/1:3,29:32:37.23:732,37,0	1/1:2,13:15:39.12:471,39,0	1/1:1,22:23:66.17:763,66,0	1/1:1,27:28:76.35:870,76,0	1/1:2,9:13:35.83:380,36,0	0/0:9,0:9:24.03:0,24,227	0/0:14,0:14:39.04:0,39,370	0/0:14,0:14:36.06:0,36,347	1/1:2,17:19:48.15:580,48,0	1/1:1,16:17:48.12:557,48,0	1/1:1,22:23:47.64:579,48,0	1/1:3,16:19:42.13:507,42,0
chr10	80892205	.	T	TG	61.89	PASS	AB=0.750;AC=1;AF=0.018;AN=56;BaseQRankSum=4.068;DP=504;FS=0.000;HRun=2;HaplotypeScore=54.8816;InbreedingCoeff=-0.0185;MQ=74.44;MQ0=0;MQRankSum=3.393;QD=4.13;ReadPosRankSum=-1.306;VQSLOD=-0.1396;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.29:0,93,1151	0/0:9,0:9:27.08:0,27,329	0/1:10,5:15:99:136,0,250	0/0:25,0:24:44.54:0,45,655	0/0:15,0:15:39.12:0,39,480	0/0:24,0:24:66.18:0,66,791	0/0:17,0:17:45.14:0,45,558	0/0:32,0:32:90.28:0,90,1105	0/0:22,0:22:57.87:0,58,715	0/0:18,0:18:51.15:0,51,621	0/0:22,0:22:63.20:0,63,776	0/0:9,0:9:24.07:0,24,297	0/0:15,0:15:45.14:0,45,557	0/0:18,0:18:51.16:0,51,630	0/0:22,0:22:66.21:0,66,818	0/0:16,0:16:42.13:0,42,521	0/0:16,0:16:48.15:0,48,594	0/0:10,0:10:30.07:0,30,357	0/0:16,0:16:45.12:0,45,538	0/0:21,0:21:60.19:0,60,743	0/0:25,0:25:69.22:0,69,855	0/0:12,0:12:33.10:0,33,409	0/0:18,0:18:54.17:0,54,668	0/0:13,0:13:39.12:0,39,484	0/0:11,0:11:30.09:0,30,372	0/0:23,0:23:69.22:0,69,851	0/0:20,0:20:57.17:0,57,694	0/0:7,0:7:21.07:0,21,260
chr10	80892679	.	TAA	T	6216.08	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=15.848;DP=418;FS=5.901;HRun=2;HaplotypeScore=126.5888;InbreedingCoeff=0.9590;MQ=61.92;MQ0=0;MQRankSum=-14.518;QD=22.69;ReadPosRankSum=1.148;VQSLOD=3.2350;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.22:0,63,1255	1/1:3,6:9:21.02:196,21,0	0/0:6,0:6:18.06:0,18,334	0/0:7,0:7:21.07:0,21,351	1/1:2,24:26:56.36:482,56,0	0/0:26,0:26:78.27:0,78,1568	0/0:9,0:9:27.09:0,27,549	1/1:3,21:24:46.03:589,46,0	0/0:13,0:13:39.12:0,39,757	1/1:5,19:24:44.79:578,45,0	1/1:5,22:27:48.04:576,48,0	0/0:12,0:12:36.12:0,36,731	0/0:12,0:12:36.12:0,36,728	0/0:10,0:10:30.10:0,30,609	1/1:0,13:13:36.66:293,37,0	1/1:2,13:15:39.76:335,40,0	1/1:4,6:10:7.33:139,7,0	1/1:2,4:6:12.02:115,12,0	1/1:4,12:16:13.38:315,13,0	1/1:5,24:29:76.49:754,76,0	1/1:1,1:2:5.97:46,6,0	0/0:9,0:9:27.09:0,27,549	0/0:11,0:11:30.10:0,30,610	0/0:8,0:8:24.08:0,24,488	1/1:1,19:20:57.91:511,58,0	1/1:3,12:15:11.77:295,12,0	1/1:2,23:25:60.63:639,61,0	1/1:2,11:13:39.02:353,39,0
chr10	80892682	.	TTAAA	T	9504.58	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=15.759;DP=398;FS=6.786;HRun=0;HaplotypeScore=126.5540;InbreedingCoeff=0.9669;MQ=62.82;MQ0=0;MQRankSum=-14.876;QD=38.02;ReadPosRankSum=0.043;VQSLOD=4.3962;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.20:0,63,1720	1/1:1,6:7:21.07:292,21,0	0/0:6,0:6:18.05:0,18,435	0/0:7,0:7:21.06:0,21,447	1/1:1,24:25:60.09:762,60,0	0/0:26,0:26:78.27:0,78,2213	0/0:9,0:9:27.09:0,27,769	1/1:2,21:23:68.69:913,69,0	0/0:12,0:12:36.12:0,36,1018	1/1:1,19:20:60.20:839,60,0	1/1:2,22:24:70.77:908,71,0	0/0:13,0:13:39.13:0,39,1109	0/0:11,0:11:33.11:0,33,913	0/0:11,0:11:33.11:0,33,922	1/1:0,13:13:39.03:475,39,0	1/1:1,13:14:42.12:552,42,0	1/1:1,6:7:16.29:206,16,0	1/1:2,4:6:12.04:171,12,0	1/1:2,12:14:38.34:519,38,0	1/1:4,24:28:83.09:1116,83,0	1/1:0,1:1:3.01:40,3,0	0/0:11,0:11:33.11:0,33,874	0/0:12,0:12:33.11:0,33,924	0/0:8,0:8:24.08:0,24,669	1/1:0,19:19:57.19:776,57,0	1/1:1,12:13:37.67:497,38,0	1/1:2,23:25:73.46:981,73,0	1/1:0,11:11:33.11:459,33,0
chr10	80894939	.	CAA	C	9736.14	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-3.379;DP=551;FS=2.416;HRun=9;HaplotypeScore=78.5299;InbreedingCoeff=0.9995;MQ=79.12;MQ0=2;MQRankSum=-3.334;QD=29.15;ReadPosRankSum=0.371;VQSLOD=5.1435;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:21:39.93:0,40,141	1/1:1,13:14:36.10:419,36,0	0/0:22,0:22:47.17:0,47,757	0/0:9,0:10:26.83:0,27,398	1/1:2,31:33:87.25:1014,87,0	0/0:1,0:26:59.89:0,60,211	0/0:1,0:16:37.43:0,37,132	1/1:8,21:29:63.11:691,63,0	0/0:17,0:17:45.14:0,45,706	1/1:3,18:21:54.15:628,54,0	1/1:1,18:19:48.05:541,48,0	0/0:15,0:15:45.15:0,45,736	0/0:2,0:18:37.43:0,37,132	0/0:1,0:24:46.36:0,46,170	1/1:4,17:21:48.13:559,48,0	1/1:1,18:19:48.14:559,48,0	1/1:1,19:20:51.15:594,51,0	1/1:1,14:15:36.11:419,36,0	1/1:3,16:18:45.09:501,45,0	1/1:2,19:21:54.15:629,54,0	1/1:1,15:16:42.12:489,42,0	0/0:22,0:22:63.21:0,63,1013	0/0:15,0:15:45.14:0,45,713	0/0:9,0:9:24.07:0,24,370	1/1:0,14:14:39.12:454,39,0	1/1:1,21:22:63.19:734,63,0	1/1:5,26:30:69.20:804,69,0	1/1:0,20:20:60.18:699,60,0
chr10	80895881	.	A	AG	1990.07	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.280;DP=598;FS=8.951;HRun=1;HaplotypeScore=58.6886;InbreedingCoeff=0.9924;MQ=82.72;MQ0=0;MQRankSum=-1.437;QD=39.02;ReadPosRankSum=1.046;VQSLOD=3.8883;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.19:0,84,1038	0/0:7,0:7:21.07:0,21,272	0/0:18,0:18:48.11:0,48,591	0/0:17,0:17:41.96:0,42,497	0/0:33,0:33:96.30:0,96,1231	1/1:0,39:39:99:1572,105,0	1/1:0,12:12:36.12:539,36,0	0/0:35,0:35:99:0,99,1275	0/0:24,0:24:69.18:0,69,864	0/0:26,0:26:66.21:0,66,846	0/0:21,0:21:60.19:0,60,774	0/0:19,0:19:54.18:0,54,701	0/0:16,0:16:42.14:0,42,545	0/0:18,0:18:51.15:0,51,648	0/0:6,0:6:18.06:0,18,233	0/0:13,0:13:39.12:0,39,493	0/0:14,0:14:39.11:0,39,491	0/0:8,0:8:24.04:0,24,270	0/0:24,0:24:69.22:0,69,896	0/0:31,0:31:93.30:0,93,1207	0/0:35,0:35:99:0,105,1319	0/0:29,0:29:87.28:0,87,1129	0/0:21,0:21:63.19:0,63,803	0/0:20,0:20:51.17:0,51,661	0/0:15,0:15:42.14:0,42,545	0/0:29,0:29:78.25:0,78,1013	0/0:26,0:26:72.23:0,72,933	0/0:11,0:11:33.11:0,33,426
chr10	80895971	.	ATCTCTCTCTCTCTCTCTCTC	A	5523.77	PASS	AC=30;AF=0.652;AN=46;BaseQRankSum=5.262;DP=540;FS=2.493;HRun=0;HaplotypeScore=239.0110;InbreedingCoeff=0.5857;MQ=59.60;MQ0=11;MQRankSum=-2.957;QD=19.11;ReadPosRankSum=1.750;VQSLOD=3.6867;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:33:6.46:280,6,0	1/1:4,5:9:9.03:476,9,0	./.	./.	1/1:10,8:18:6.02:207,6,0	0/0:11,0:11:6.02:0,6,221	0/0:7,0:10:3.01:0,3,143	0/0:34,0:33:1.77:0,2,4	0/0:13,0:17:9.03:0,9,669	1/1:18,9:27:25.53:773,26,0	1/1:9,10:18:9.03:460,9,0	0/0:19,0:18:17.91:0,18,1022	1/1:14,0:26:12.04:558,12,0	1/1:6,0:11:3.01:133,3,0	1/1:8,7:15:15.05:734,15,0	1/1:10,3:13:3.01:159,3,0	1/1:12,0:12:2.13:50,2,0	1/1:12,2:14:7.53:336,8,0	./.	1/1:18,6:22:9.03:294,9,0	./.	0/0:29,0:29:5.58:0,6,223	0/0:16,0:16:3.01:0,3,192	0/0:15,0:16:7.17:0,7,427	1/1:12,9:21:3.01:159,3,0	./.	1/1:25,12:37:16.95:884,17,0	1/1:9,0:9:2.70:20,3,0
chr10	80895991	.	C	CA	736.46	PASS	AB=0.952;AC=10;AF=0.179;AN=56;BaseQRankSum=6.441;DP=505;FS=5.719;HRun=0;HaplotypeScore=114.1081;InbreedingCoeff=-0.2177;MQ=47.99;MQ0=21;MQRankSum=-2.527;QD=4.88;ReadPosRankSum=-1.944;VQSLOD=2.8061;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:29:14.91:0,15,257	0/1:7,0:7:11.58:12,0,87	0/0:17,0:6:15.04:0,15,194	0/0:19,0:6:13.81:0,14,146	0/1:17,0:17:90.57:91,0,105	0/0:21,0:21:33.11:0,33,453	0/0:14,0:14:20.94:0,21,244	0/0:23,0:19:26.04:0,26,611	0/0:26,0:26:38.98:0,39,517	0/1:25,0:25:99:207,0,476	0/1:17,0:16:58.77:59,0,77	0/0:20,0:18:42.14:0,42,566	0/0:23,0:23:24.89:0,25,226	0/0:10,0:10:8.62:0,9,123	0/1:14,0:14:32.18:32,0,120	0/0:9,0:9:17.55:0,18,216	0/0:11,0:11:18.52:0,19,223	0/1:13,3:14:99:123,0,280	0/1:9,1:10:57.38:57,0,301	0/1:24,0:22:67.33:67,0,230	0/0:20,0:19:12.04:0,12,166	0/0:27,0:26:48.15:0,48,645	0/0:17,0:17:45.14:0,45,603	0/0:14,0:13:15.02:0,15,192	0/0:23,0:22:15.60:0,16,213	0/1:9,4:13:99:226,0,133	0/0:31,0:31:15.89:0,16,441	0/1:8,0:8:3.07:3,0,154
chr10	80905102	.	T	TA	675.15	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=-3.042;DP=292;FS=11.057;HRun=9;HaplotypeScore=29.9618;InbreedingCoeff=0.8798;MQ=56.94;MQ0=21;MQRankSum=-0.499;QD=23.28;ReadPosRankSum=-0.040;VQSLOD=3.0628;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,9:9:27.03:285,27,0	0/0:6,0:6:15:0,15,130	./.	0/0:6,0:6:16.80:0,17,131	0/0:14,0:13:32.89:0,33,286	0/0:0,0:7:10.19:0,10,30	0/0:1,0:6:10.18:0,10,30	0/0:23,0:23:56.93:0,57,486	0/0:7,0:6:11.99:0,12,104	0/0:16,0:16:38.99:0,39,339	0/0:18,0:17:47.99:0,48,417	0/0:2,0:2:6:0,6,52	1/1:1,10:11:30.08:331,30,0	1/1:0,6:6:18.05:199,18,0	0/0:8,0:8:20.99:0,21,182	0/0:7,0:6:14.99:0,15,130	0/0:16,0:12:29.99:0,30,260	0/0:8,0:7:21:0,21,182	0/0:13,0:11:32.99:0,33,286	0/0:11,0:10:29.98:0,30,257	0/0:9,0:6:9:0,9,78	0/0:12,0:12:32.99:0,33,286	0/0:17,0:15:41.99:0,42,365	0/0:7,0:5:15:0,15,130	0/0:12,0:12:35.97:0,36,308	0/0:14,0:14:35.97:0,36,312	0/0:11,0:10:29.99:0,30,260	0/0:11,0:10:23.99:0,24,208
chr10	80906871	.	GACAGACACACAC	G	3130.81	PASS	AB=1.000;AC=35;AF=0.673;AN=52;BaseQRankSum=5.168;DP=477;FS=29.102;HRun=0;HaplotypeScore=169.2801;InbreedingCoeff=0.7123;MQ=65.14;MQ0=19;MQRankSum=-5.432;QD=11.43;ReadPosRankSum=-0.990;VQSLOD=1.2219;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,1:20:32.80:253,33,0	1/1:2,0:8:3.01:93,3,0	0/0:37,0:22:52.27:0,52,579	0/0:42,0:21:56.92:0,57,587	./.	0/1:19,0:19:12.97:13,0,224	0/0:18,0:18:12.31:0,12,225	1/1:20,0:20:47.55:343,48,0	0/0:11,0:11:30.03:0,30,912	1/1:4,0:19:26.72:226,27,0	./.	0/0:8,0:8:21.01:0,21,575	1/1:10,0:14:26.36:266,26,0	1/1:14,0:18:26.81:232,27,0	1/1:1,0:17:3.01:69,3,0	1/1:2,15:17:8.95:218,9,0	1/1:1,7:9:9.03:248,9,0	1/1:2,0:8:0.07:67,0,0	1/1:0,1:9:23.88:372,24,0	1/1:0,21:22:5.70:199,6,0	1/1:11,0:10:5.99:50,6,0	0/0:10,0:10:21.06:0,21,980	0/0:14,0:14:24:0,24,458	0/0:25,0:25:47.13:0,47,2215	1/1:13,0:15:5.99:50,6,0	1/1:4,0:19:26.70:233,27,0	1/1:5,14:19:8.38:282,8,0	1/1:3,2:4:3.01:107,3,0
chr10	80906873	.	CAG	C	1789.06	PASS	AB=1.000;AC=33;AF=0.635;AN=52;BaseQRankSum=5.984;DP=464;FS=40.585;HRun=0;HaplotypeScore=113.4958;InbreedingCoeff=0.7900;MQ=64.16;MQ0=19;MQRankSum=-5.419;QD=7.45;ReadPosRankSum=-1.260;VQSLOD=1.0279;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:32.80:253,33,0	1/1:6,0:6:2.99:23,3,0	0/0:37,0:22:52.25:0,52,547	0/0:41,0:20:56.91:0,57,556	./.	0/0:18,0:18:35.31:0,35,270	0/0:17,0:17:20.80:0,21,261	1/1:0,16:16:47.55:343,48,0	0/0:12,0:12:29.81:0,30,338	1/1:16,0:16:26.71:190,27,0	./.	0/0:8,0:8:11.14:0,11,182	1/1:14,0:13:26.74:208,27,0	1/1:19,0:18:26.79:207,27,0	1/1:17,0:17:3.01:30,3,0	1/1:17,0:16:8.51:50,9,0	1/1:9,0:9:8.63:55,9,0	0/1:9,0:7:0.23:19,0,0	1/1:9,0:9:23.77:168,24,0	1/1:22,0:22:5.99:55,6,0	1/1:10,0:9:5.99:50,6,0	0/0:12,0:12:23.99:0,24,309	0/0:15,0:15:15:0,15,198	0/0:28,0:28:31.05:0,31,687	1/1:15,0:15:5.99:50,6,0	1/1:18,0:18:26.68:183,27,0	1/1:17,0:17:8.76:81,9,0	1/1:5,0:4:2.96:19,3,0
chr10	80906875	.	GAC	G	207.28	PASS	AB=0.937;AC=32;AF=0.800;AN=40;BaseQRankSum=5.836;DP=469;FS=0.000;HRun=0;HaplotypeScore=119.5403;InbreedingCoeff=0.0625;MQ=62.46;MQ0=28;MQRankSum=-4.804;QD=0.76;ReadPosRankSum=1.647;VQSLOD=1.5670;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:6,0:6:2.84:14,3,0	./.	./.	./.	1/1:17,0:17:3.54:11,4,0	0/1:16,0:17:3.59:4,0,19	./.	0/1:15,0:14:1.99:2,0,169	1/1:15,0:15:2.80:13,3,0	./.	0/1:8,1:11:17.33:17,0,103	1/1:12,0:11:4.43:20,4,0	./.	1/1:17,0:17:2.88:15,3,0	1/1:18,0:16:2.66:14,3,0	1/1:10,0:9:6.10:24,6,0	1/1:10,0:7:2.84:14,3,0	1/1:10,0:9:8.05:37,8,0	1/1:24,0:22:5.71:29,6,0	0/1:12,0:10:0:0,0,0	0/0:12,0:15:20.98:0,21,214	0/1:11,5:16:23.33:23,0,59	0/1:28,0:27:19.68:20,0,330	./.	1/1:15,0:15:2.84:14,3,0	1/1:15,0:15:8.34:43,8,0	1/1:3,0:2:2.50:9,2,0
chr10	80906933	.	C	CAG	837.76	PASS	AB=0.994;AC=17;AF=0.315;AN=54;BaseQRankSum=5.869;DP=571;FS=19.455;HRun=0;HaplotypeScore=181.3569;InbreedingCoeff=0.1947;MQ=49.29;MQ0=41;MQRankSum=-4.260;QD=3.19;ReadPosRankSum=1.451;VQSLOD=1.5841;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:14:3.01:32,3,0	0/0:9,0:8:12.40:0,12,96	0/0:15,0:11:20.72:0,21,230	0/0:30,0:19:21.13:0,21,312	0/0:24,0:23:11.19:0,11,70	1/1:4,19:23:27.09:421,27,0	1/1:7,12:22:15.05:257,15,0	0/1:35,0:23:9.71:10,0,191	0/0:15,0:13:27.09:0,27,359	0/1:17,0:14:21.96:22,0,158	0/0:21,0:20:11.74:0,12,81	0/0:15,0:12:26.10:0,26,310	0/0:19,0:16:14.77:0,15,77	0/1:18,0:15:0:0,0,0	0/1:18,0:16:13.26:13,0,45	1/1:14,0:13:4.51:23,5,0	0/1:16,1:14:15.85:16,0,76	0/1:20,0:18:18.81:19,0,162	0/1:27,0:25:99:112,0,136	0/0:29,0:27:3.51:0,4,135	./.	0/0:23,0:23:50.90:0,51,650	0/0:23,0:22:36.10:0,36,463	0/0:26,0:25:51.17:0,51,677	0/0:14,0:14:11.35:0,11,67	0/1:30,0:28:61.47:61,0,372	0/0:28,0:28:11.44:0,11,305	0/1:4,0:2:10.79:15,0,11
chr10	80906941	.	C	CAG	2257.50	PASS	AB=0.807;AC=37;AF=0.661;AN=56;BaseQRankSum=5.388;DP=605;FS=11.693;HRun=0;HaplotypeScore=172.8369;InbreedingCoeff=0.5746;MQ=54.11;MQ0=37;MQRankSum=-0.462;QD=5.11;ReadPosRankSum=-3.933;VQSLOD=1.6886;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,12:18:0.45:76,0,0	1/1:7,0:6:8.38:44,8,0	0/0:28,0:21:37.85:0,38,514	0/0:36,0:24:23.40:0,23,456	1/1:26,0:25:20.14:172,20,0	0/1:26,0:26:15.04:15,0,105	1/1:19,0:18:5.14:19,5,0	1/1:42,0:30:29.01:327,29,0	0/0:12,0:11:33.11:0,33,431	1/1:16,0:15:11.79:111,12,0	1/1:20,0:19:19.47:171,19,0	0/0:14,0:11:24.06:0,24,292	0/1:11,8:18:30.07:30,0,46	0/1:10,7:14:0:0,0,0	1/1:17,0:16:18.57:150,19,0	1/1:15,0:14:0.95:44,1,0	1/1:19,0:17:7.78:115,8,0	1/1:19,0:17:17.32:98,17,0	1/1:25,0:23:21.69:135,22,0	1/1:30,0:28:17.57:168,18,0	1/1:16,0:11:3.01:47,3,0	0/0:23,0:23:51.16:0,51,664	0/0:23,0:22:42.14:0,42,554	0/0:26,0:25:57.14:0,57,730	1/1:13,0:13:5.92:43,6,0	1/1:34,0:32:26.45:394,26,0	0/1:30,0:30:16.20:143,0,16	1/1:9,0:7:12.77:145,13,0
chr10	80907778	.	G	GC	1553.93	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.215;DP=540;FS=6.334;HRun=0;HaplotypeScore=57.1642;InbreedingCoeff=0.9546;MQ=81.33;MQ0=0;MQRankSum=-2.634;QD=43.16;ReadPosRankSum=-0.052;VQSLOD=3.9116;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.24:0,81,1090	0/0:6,0:6:15.05:0,15,209	0/0:13,0:13:35.79:0,36,471	0/0:21,0:21:47.69:0,48,683	0/0:20,0:20:60.18:0,60,817	1/1:0,23:23:69.24:1101,69,0	1/1:0,13:13:36.12:574,36,0	0/0:28,0:28:81.25:0,81,1091	0/0:21,0:21:63.20:0,63,862	0/0:22,0:22:66.21:0,66,894	0/0:21,0:21:60.19:0,60,807	0/0:14,0:14:42.14:0,42,587	0/0:22,0:22:66.21:0,66,905	0/0:28,0:28:84.27:0,84,1158	0/0:24,0:24:72.19:0,72,953	0/0:14,0:14:42.13:0,42,570	0/0:15,0:15:39.11:0,39,527	0/0:5,0:5:14.93:0,15,162	0/0:9,0:9:27.09:0,27,378	0/0:22,0:22:66.22:0,66,922	0/0:32,0:32:96.26:0,96,1269	0/0:19,0:19:57.17:0,57,758	0/0:27,0:27:78.26:0,78,1085	0/0:24,0:24:69.17:0,69,922	0/0:16,0:16:45.15:0,45,628	0/0:28,0:27:81.26:0,81,1115	0/0:23,0:23:66.21:0,66,902	0/0:3,0:3:9.03:0,9,124
chr10	80907877	.	ACGCAAATAAG	A	1836.96	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.368;DP=606;FS=6.157;HRun=0;HaplotypeScore=175.3412;InbreedingCoeff=0.9971;MQ=77.10;MQ0=0;MQRankSum=-7.331;QD=87.47;ReadPosRankSum=1.388;VQSLOD=3.5796;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.28:0,81,4132	0/0:17,0:17:51.14:0,51,2190	0/0:14,0:14:42.14:0,42,1747	0/0:12,0:12:36.12:0,36,1461	0/0:29,0:29:87.30:0,87,4481	1/1:0,8:8:21.07:733,21,0	1/1:0,13:13:36.12:1224,36,0	0/0:37,0:37:99:0,108,5232	0/0:25,0:25:75.26:0,75,3566	0/0:39,0:39:99:0,117,5880	0/0:20,0:20:60.21:0,60,3006	0/0:16,0:16:48.16:0,48,2104	0/0:16,0:16:48.16:0,48,2218	0/0:31,0:31:93.32:0,93,4866	0/0:18,0:18:54.19:0,54,2396	0/0:14,0:14:42.14:0,42,2185	0/0:18,0:18:54.18:0,54,2556	0/0:9,0:9:27.09:0,27,1355	0/0:15,0:15:45.15:0,45,2293	0/0:39,0:39:99:0,117,5834	0/0:25,0:25:75.26:0,75,3941	0/0:21,0:21:63.22:0,63,3175	0/0:29,0:29:87.28:0,87,4166	0/0:21,0:21:63.19:0,63,3101	0/0:19,0:19:57.20:0,57,2945	0/0:25,0:25:75.26:0,75,3835	0/0:36,0:36:99:0,105,5391	0/0:12,0:12:36.12:0,36,1954
chr10	80908066	.	TA	T	1184.85	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.185;DP=414;FS=0.620;HRun=5;HaplotypeScore=40.8889;InbreedingCoeff=0.9422;MQ=79.99;MQ0=0;MQRankSum=0.075;QD=24.18;ReadPosRankSum=0.192;VQSLOD=2.0901;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:60.17:681,60,0	0/0:6,0:6:15.05:0,15,205	0/0:13,0:13:21.24:0,21,384	0/0:10,0:10:24.01:0,24,293	0/0:21,0:21:63.21:0,63,861	0/0:6,0:6:14.98:0,15,158	0/0:3,0:3:9.03:0,9,118	0/0:26,0:26:69.22:0,69,929	0/0:15,0:15:45.15:0,45,614	0/0:22,0:22:63.21:0,63,862	0/0:26,0:26:75.25:0,75,1026	0/0:11,0:11:33.11:0,33,452	1/1:0,11:11:27.08:306,27,0	1/1:1,14:15:30.09:340,30,0	0/0:9,0:9:24.08:0,24,328	0/0:10,0:10:27.09:0,27,369	0/0:8,0:8:24.08:0,24,326	0/0:19,0:19:51.17:0,51,696	0/0:17,0:17:51.17:0,51,697	0/0:29,0:29:66.22:0,66,902	0/0:4,0:4:9.03:0,9,123	0/0:15,0:15:45.15:0,45,616	0/0:13,0:13:39.13:0,39,524	0/0:11,0:11:33.11:0,33,451	0/0:20,0:20:57.18:0,57,751	0/0:27,0:27:78.24:0,78,1037	0/0:17,0:17:45.11:0,45,594	0/0:7,0:7:18.06:0,18,245
chr10	80908163	.	A	AT	354.91	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.623;DP=465;FS=12.679;HRun=7;HaplotypeScore=43.0860;InbreedingCoeff=0.9547;MQ=74.62;MQ0=0;MQRankSum=-0.853;QD=20.88;ReadPosRankSum=0.387;VQSLOD=1.9283;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:51.07:0,51,492	0/0:7,0:7:18.03:0,18,174	0/0:10,0:10:14.53:0,15,179	0/0:7,0:7:15.02:0,15,145	0/0:35,0:35:99:0,99,956	1/1:2,9:11:27.08:326,27,0	1/1:1,5:6:12.04:145,12,0	0/0:23,0:23:60.09:0,60,579	0/0:11,0:11:27.03:0,27,255	0/0:31,0:31:87.14:0,87,840	0/0:31,0:31:87.13:0,87,840	0/0:16,0:16:48.06:0,48,457	0/0:15,0:15:39.05:0,39,377	0/0:15,0:15:39.05:0,39,371	0/0:10,0:10:30.05:0,30,290	0/0:18,0:18:54.05:0,54,508	0/0:6,0:6:18:0,18,166	0/0:11,0:11:24.04:0,24,232	0/0:12,0:12:36.05:0,36,343	0/0:27,0:27:72.11:0,72,695	0/0:9,0:9:27.04:0,27,261	0/0:14,0:14:42.07:0,42,406	0/0:16,0:16:48.08:0,48,464	0/0:10,0:10:24.03:0,24,232	0/0:23,0:23:63.10:0,63,608	0/0:24,0:24:63.10:0,63,608	0/0:31,0:31:93.14:0,93,893	0/0:15,0:15:45.07:0,45,435
chr10	80908408	.	CTGGTGAT	C	4372.67	PASS	AB=0.511;AC=5;AF=0.089;AN=56;BaseQRankSum=2.057;DP=602;FS=0.529;HRun=0;HaplotypeScore=172.4599;InbreedingCoeff=0.7592;MQ=87.42;MQ0=0;MQRankSum=-11.752;QD=71.68;ReadPosRankSum=2.711;VQSLOD=4.6550;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:42.14:1172,42,0	0/0:7,0:7:21.07:0,21,798	0/0:23,0:23:66.19:0,66,2136	0/0:29,0:29:81.61:0,82,3019	0/0:29,0:29:87.30:0,87,3578	0/0:21,0:21:60.21:0,60,1871	0/0:17,0:17:36.12:0,36,1188	0/0:36,0:36:99:0,105,4188	0/0:17,0:17:51.18:0,51,2131	0/0:26,0:26:75.26:0,75,3153	0/0:28,0:28:84.29:0,84,3471	0/0:14,0:14:42.13:0,42,1648	1/1:0,19:19:57.20:1590,57,0	0/1:1,23:24:70.21:1610,0,70	0/0:21,0:21:63.19:0,63,2386	0/0:13,0:13:39.13:0,39,1636	0/0:29,0:28:84.29:0,84,3445	0/0:3,0:3:9.03:0,9,378	0/0:18,0:18:51.15:0,51,1891	0/0:37,0:37:99:0,108,4202	0/0:23,0:23:69.21:0,69,2735	0/0:21,0:21:63.20:0,63,2514	0/0:20,0:20:60.21:0,60,2518	0/0:22,0:22:66.23:0,66,2744	0/0:11,0:11:33.11:0,33,1385	0/0:31,0:31:93.32:0,93,3805	0/0:33,0:33:99:0,99,4021	0/0:12,0:12:36.12:0,36,1511
chr10	80908857	.	CAGAGTAAATG	C	22040.14	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=13.645;DP=421;FS=4.444;HRun=0;HaplotypeScore=145.6471;InbreedingCoeff=0.9729;MQ=77.54;MQ0=0;MQRankSum=-15.177;QD=88.87;ReadPosRankSum=1.656;VQSLOD=5.1369;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.16:0,48,2591	1/1:0,5:5:15.05:522,15,0	0/0:18,0:18:54.19:0,54,2560	0/0:8,0:8:24.07:0,24,853	1/1:0,26:26:60.20:1927,60,0	0/0:20,0:20:60.21:0,60,3199	0/0:8,0:8:24.08:0,24,1111	1/1:0,14:14:39.13:1232,39,0	0/0:17,0:17:48.16:0,48,2246	1/1:0,13:13:36.12:1137,36,0	1/1:0,20:20:54.18:1803,54,0	0/0:17,0:17:51.18:0,51,2681	0/0:20,0:20:60.21:0,60,3223	0/0:13,0:13:39.13:0,39,2083	1/1:0,15:15:45.15:1543,45,0	1/1:0,14:14:36.12:1250,36,0	1/1:0,5:5:12.04:417,12,0	1/1:0,2:2:6.02:209,6,0	1/1:0,14:14:42.06:1238,42,0	1/1:0,32:32:93.32:3179,93,0	1/1:1,7:8:12.04:298,12,0	0/0:7,0:7:21.07:0,21,1155	0/0:21,0:21:63.22:0,63,3172	0/0:7,0:7:21.07:0,21,1113	1/1:0,15:15:36.12:1244,36,0	1/1:0,23:23:69.24:2283,69,0	1/1:0,23:23:60.21:2084,60,0	1/1:0,19:19:48.16:1673,48,0
chr10	80909746	.	T	TA	1292.39	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.805;DP=524;FS=0.595;HRun=8;HaplotypeScore=51.2619;InbreedingCoeff=0.9822;MQ=80.05;MQ0=0;MQRankSum=-1.060;QD=27.50;ReadPosRankSum=-0.730;VQSLOD=3.8402;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:30.01:0,30,275	0/0:5,0:5:15.01:0,15,137	0/0:11,0:11:23.99:0,24,213	0/0:15,0:15:18.43:0,18,268	0/0:16,0:16:48.03:0,48,439	1/1:2,27:29:75.22:865,75,0	1/1:1,16:18:48.14:549,48,0	0/0:29,0:29:72:0,72,648	0/0:26,0:26:66.02:0,66,604	0/0:32,0:32:93.04:0,93,848	0/0:27,0:27:78.04:0,78,714	0/0:17,0:17:45:0,45,407	0/0:20,0:20:54.03:0,54,494	0/0:12,0:12:36.02:0,36,329	0/0:21,0:21:63.02:0,63,572	0/0:14,0:14:35.99:0,36,324	0/0:17,0:17:39.64:0,40,359	0/0:15,0:15:33:0,33,302	0/0:11,0:11:33.02:0,33,302	0/0:22,0:22:60.03:0,60,549	0/0:17,0:17:42.02:0,42,384	0/0:18,0:18:48.01:0,48,435	0/0:26,0:26:69.03:0,69,631	0/0:15,0:15:42:0,42,379	0/0:24,0:24:69.04:0,69,632	0/0:23,0:23:57.01:0,57,517	0/0:25,0:25:72.03:0,72,654	0/0:6,0:6:18.01:0,18,165
chr10	80910008	.	TA	T	1630.52	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-1.295;DP=445;FS=0.000;HRun=10;HaplotypeScore=72.0802;InbreedingCoeff=0.9426;MQ=60.79;MQ0=1;MQRankSum=-0.467;QD=19.64;ReadPosRankSum=2.113;VQSLOD=4.4815;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:53.98:468,54,0	0/0:2,0:2:6.02:0,6,66	0/0:14,0:10:24.02:0,24,245	0/0:8,0:6:15.04:0,15,166	0/0:18,0:18:48.11:0,48,522	1/1:1,14:15:41.98:364,42,0	1/1:1,6:7:12:104,12,0	0/0:20,0:20:39.10:0,39,425	0/0:24,1:25:40.12:0,40,662	0/0:25,0:25:63.16:0,63,688	0/0:16,0:16:45.12:0,45,498	0/0:8,0:8:24.06:0,24,266	1/1:2,15:17:41.99:365,42,0	1/1:5,18:23:59.35:503,59,0	0/0:13,0:13:39.09:0,39,424	0/0:12,0:12:36.10:0,36,398	0/0:20,2:21:11.60:0,12,488	0/0:11,0:11:15.41:0,15,284	0/0:29,0:29:54.77:0,55,806	0/0:18,0:18:42.09:0,42,449	0/0:13,0:13:39.11:0,39,431	0/0:9,0:9:27.07:0,27,299	0/0:12,1:13:10.04:0,10,339	0/0:12,0:12:33.08:0,33,357	0/0:20,0:20:60.16:0,60,659	0/0:24,0:24:66.17:0,66,724	0/0:19,0:18:48.13:0,48,531	0/0:11,0:11:32.68:0,33,342
chr10	80910083	.	TGGTGGTGGTGAAGTAAG	T	2564.60	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.482;DP=414;FS=0.000;HRun=0;HaplotypeScore=188.1784;InbreedingCoeff=0.9450;MQ=77.14;MQ0=1;MQRankSum=-6.533;QD=88.43;ReadPosRankSum=0.930;VQSLOD=3.4361;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:39.13:0,39,3166	0/0:8,0:8:24.08:0,24,1836	0/0:10,0:10:24.05:0,24,1056	0/0:15,0:14:35.23:0,35,2538	0/0:22,0:22:57.20:0,57,4193	1/1:6,16:21:51.16:2250,51,0	1/1:3,4:7:9.03:429,9,0	0/0:28,0:28:66.23:0,66,4054	0/0:9,0:9:24.08:0,24,1435	0/0:17,0:17:48.16:0,48,3279	0/0:17,0:17:48.16:0,48,3685	0/0:8,0:8:24.08:0,24,1986	0/0:10,0:10:24.08:0,24,1842	0/0:12,0:12:27.09:0,27,2118	0/0:7,0:7:18.06:0,18,1443	0/0:7,0:7:21.07:0,21,1486	0/0:25,0:25:72.25:0,72,4801	0/0:9,0:8:21.07:0,21,1737	0/0:25,0:24:66.23:0,66,4180	0/0:18,0:18:51.18:0,51,3852	0/0:18,0:18:48.16:0,48,3336	0/0:6,0:6:15.05:0,15,971	0/0:11,0:11:33.11:0,33,2551	0/0:19,0:19:54.19:0,54,4041	0/0:26,0:26:72.25:0,72,5243	0/0:24,0:24:72.25:0,72,5054	0/0:11,0:11:30.10:0,30,2162	0/0:7,0:7:21.07:0,21,1552
chr10	80910492	.	T	TA	786.29	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.564;DP=595;FS=1.636;HRun=7;HaplotypeScore=66.9707;InbreedingCoeff=0.9665;MQ=77.54;MQ0=0;MQRankSum=-1.938;QD=23.83;ReadPosRankSum=-0.610;VQSLOD=3.7723;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:57.08:0,57,550	0/0:4,0:4:9.01:0,9,87	0/0:25,0:23:60.01:0,60,558	0/0:25,0:25:46.25:0,46,419	0/0:22,0:22:63.10:0,63,608	1/1:3,21:24:57.17:689,57,0	1/1:2,7:9:18.06:217,18,0	0/0:42,0:42:96.14:0,96,927	0/0:28,0:28:84.11:0,84,800	0/0:29,0:29:78.11:0,78,749	0/0:21,0:21:54.07:0,54,517	0/0:17,0:17:48.07:0,48,464	0/0:17,0:17:45.07:0,45,434	0/0:22,0:22:66.11:0,66,637	0/0:18,0:18:42.06:0,42,406	0/0:17,0:17:45.06:0,45,429	0/0:23,0:23:63.08:0,63,601	0/0:23,0:22:53.61:0,54,521	0/0:21,0:21:54.07:0,54,517	0/0:17,0:17:51.07:0,51,487	0/0:17,0:17:45.06:0,45,429	0/0:16,0:16:42.06:0,42,406	0/0:16,0:16:45.07:0,45,434	0/0:18,0:18:48.07:0,48,463	0/0:16,0:16:48.08:0,48,464	0/0:26,0:26:75.11:0,75,720	0/0:28,0:28:72.08:0,72,683	0/0:30,0:30:84.14:0,84,811
chr10	80911229	.	GGGGAGTCTGACTCGCGCT	G	3760.16	PASS	AC=42;AF=0.913;AN=46;BaseQRankSum=0.910;DP=77;FS=8.605;HRun=0;HaplotypeScore=101.9497;InbreedingCoeff=0.2236;MQ=49.71;MQ0=0;MQRankSum=-2.404;QD=51.51;ReadPosRankSum=0.210;VQSLOD=1.9208;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:14.86:231,15,0	1/1:2,0:2:5.92:38,6,0	0/0:2,0:1:3.01:0,3,38	0/0:2,0:2:3.01:0,3,137	1/1:1,0:1:2.97:20,3,0	1/1:5,0:5:15.05:678,15,0	./.	./.	1/1:2,2:4:5.90:37,6,0	1/1:1,0:1:3.01:152,3,0	./.	1/1:2,8:10:23.71:287,24,0	1/1:3,0:3:9:303,9,0	1/1:1,0:1:2.96:19,3,0	1/1:2,0:2:5.98:173,6,0	1/1:1,0:1:2.94:18,3,0	1/1:5,0:5:12.04:593,12,0	1/1:1,0:1:3.01:151,3,0	1/1:1,0:1:3.01:137,3,0	1/1:4,0:3:8.58:48,9,0	./.	1/1:3,2:5:5.90:37,6,0	1/1:6,4:10:8.95:194,9,0	1/1:5,2:7:2.87:17,3,0	1/1:1,0:1:2.94:18,3,0	1/1:2,0:2:6.02:302,6,0	1/1:2,0:2:6.02:306,6,0	./.
chr10	80911234	.	GTCTGACTCGCGCT	G	2108.98	PASS	AB=0.524;AC=27;AF=0.750;AN=36;BaseQRankSum=2.648;DP=65;FS=14.907;HRun=0;HaplotypeScore=87.3267;InbreedingCoeff=0.3504;MQ=68.51;MQ0=0;MQRankSum=-2.809;QD=45.85;ReadPosRankSum=2.167;VQSLOD=2.1570;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,4:5:3.01:118,3,0	0/1:0,2:2:0:0,0,0	0/0:5,0:3:6.02:0,6,104	0/0:5,0:3:3.48:0,3,136	./.	1/1:0,0:5:15.05:452,15,0	./.	./.	./.	1/1:0,1:1:3.01:108,3,0	./.	1/1:8,0:8:3.01:91,3,0	1/1:1,2:3:6.02:183,6,0	0/1:0,1:1:0:0,0,0	1/1:0,2:2:3.01:109,3,0	./.	1/1:2,3:5:13.60:419,14,0	1/1:0,1:1:3.01:107,3,0	1/1:1,0:1:3.01:93,3,0	0/1:1,3:3:0:0,0,0	./.	./.	1/1:4,0:4:3.01:91,3,0	0/0:2,0:2:0.47:0,0,1	./.	1/1:0,2:2:6.02:214,6,0	1/1:0,2:2:6.02:221,6,0	./.
chr10	80911240	.	CTCGCGCTG	C	1247.95	PASS	AB=1.000;AC=25;AF=0.833;AN=30;BaseQRankSum=3.899;DP=72;FS=4.537;HRun=0;HaplotypeScore=86.3133;InbreedingCoeff=0.3527;MQ=71.69;MQ0=0;MQRankSum=-2.778;QD=30.44;ReadPosRankSum=3.440;VQSLOD=3.0594;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:3.01:81,3,0	./.	0/0:8,0:3:8.99:0,9,119	0/0:8,0:4:6.48:0,6,145	./.	1/1:5,0:5:15.04:189,15,0	./.	./.	./.	1/1:1,0:1:3.01:71,3,0	./.	1/1:8,0:8:3.01:57,3,0	1/1:3,0:3:6.02:113,6,0	./.	1/1:2,0:2:3.01:69,3,0	./.	1/1:3,2:5:7.61:281,8,0	1/1:1,0:1:3.01:70,3,0	1/1:0,1:1:3.01:78,3,0	./.	./.	./.	1/1:4,0:4:3.01:63,3,0	0/1:2,0:2:0:0,0,0	./.	1/1:2,0:2:6.02:144,6,0	1/1:2,0:2:6.02:133,6,0	./.
chr10	80911486	.	A	AG	9784.01	PASS	AB=0.750;AC=41;AF=0.732;AN=56;BaseQRankSum=0.399;DP=440;FS=0.423;HRun=1;HaplotypeScore=81.1784;InbreedingCoeff=0.8358;MQ=67.70;MQ0=1;MQRankSum=-3.973;QD=31.06;ReadPosRankSum=1.661;VQSLOD=4.5810;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:14:24.64:210,25,0	1/1:2,7:9:24.03:314,24,0	0/0:22,0:17:26.89:0,27,328	0/0:18,0:11:1.33:0,1,60	1/1:4,14:18:41.07:600,41,0	1/1:4,0:17:44.69:336,45,0	1/1:3,0:11:32.79:265,33,0	1/1:5,26:31:93.11:1172,93,0	0/0:21,0:21:55.77:0,56,576	1/1:2,12:14:39.09:527,39,0	1/1:2,10:12:27.09:379,27,0	0/0:8,0:8:20.80:0,21,244	1/1:2,1:10:9.39:132,9,0	1/1:8,0:18:47.65:392,48,0	1/1:4,12:16:25.30:515,25,0	1/1:3,7:10:11.09:316,11,0	1/1:4,9:11:27.09:375,27,0	0/1:2,1:3:11.36:53,0,11	1/1:2,17:19:57.13:762,57,0	1/1:7,18:25:71.98:860,72,0	1/1:4,7:11:6.63:270,7,0	0/0:20,0:20:59.73:0,60,556	0/0:27,0:27:78.05:0,78,901	0/0:9,0:9:27.05:0,27,300	1/1:2,5:7:15.05:207,15,0	1/1:6,19:25:72.06:912,72,0	1/1:5,22:25:72.18:974,72,0	1/1:0,5:5:15.05:211,15,0
chr10	80911487	.	G	GA	3790.93	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=2.098;DP=440;FS=18.055;HRun=8;HaplotypeScore=102.9372;InbreedingCoeff=0.5918;MQ=67.58;MQ0=1;MQRankSum=-4.688;QD=12.00;ReadPosRankSum=4.869;VQSLOD=1.4766;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:11.62:14,0,12	1/1:8,0:8:19.58:142,20,0	0/0:22,0:17:18.33:0,18,325	0/0:18,0:11:11.58:0,12,81	1/1:18,0:18:15.52:269,16,0	0/1:16,0:16:7.03:19,0,7	0/1:11,0:11:2.47:39,0,2	1/1:31,0:31:65.20:379,65,0	0/0:20,0:20:55.22:0,55,567	1/1:14,0:14:16.21:225,16,0	1/1:11,0:11:26.84:207,27,0	0/0:8,0:8:20.80:0,21,228	1/1:9,1:10:0.52:16,1,0	1/1:13,4:18:15.36:159,15,0	1/1:16,0:16:21.73:241,22,0	0/1:10,0:10:5.90:109,0,6	1/1:13,0:11:7.80:161,8,0	1/1:4,0:4:1.18:19,1,0	1/1:19,0:19:47.14:307,47,0	1/1:26,0:26:57.44:391,57,0	1/1:11,0:11:14.06:92,14,0	0/0:20,0:20:58.34:0,58,638	0/0:26,0:26:78.24:0,78,925	0/0:9,0:9:21.06:0,21,251	0/1:7,0:7:3.08:80,0,3	1/1:25,0:25:52.46:380,52,0	1/1:28,0:26:64.83:445,65,0	1/1:5,0:5:14.72:95,15,0
chr10	80911508	.	CAAAA	C	5790.60	PASS	AB=0.727;AC=33;AF=0.611;AN=54;BaseQRankSum=2.525;DP=427;FS=18.431;HRun=14;HaplotypeScore=114.8751;InbreedingCoeff=0.9042;MQ=67.52;MQ0=3;MQRankSum=-5.409;QD=25.07;ReadPosRankSum=1.490;VQSLOD=2.0590;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:18:45.06:0,45,708	1/1:2,3:5:9:127,9,0	0/0:31,0:18:33.29:0,33,440	0/0:30,0:16:28.87:0,29,376	0/1:10,6:16:1.31:194,0,1	1/1:1,0:9:21.42:167,21,0	1/1:4,0:14:25.93:230,26,0	1/1:14,9:23:49.26:632,49,0	0/0:16,0:17:45:0,45,869	1/1:4,11:15:39.07:504,39,0	1/1:6,4:10:23.91:267,24,0	0/0:9,0:11:30.01:0,30,579	0/0:9,0:11:27.44:0,27,452	0/0:17,0:20:51.14:0,51,861	1/1:4,14:19:37.35:505,37,0	1/1:3,6:10:27.04:322,27,0	1/1:4,6:9:8.99:127,9,0	1/1:1,3:4:6.01:85,6,0	1/1:6,10:16:36.10:495,36,0	1/1:8,12:21:47.17:568,47,0	1/1:3,4:7:12.03:169,12,0	0/0:20,1:22:15.67:0,16,1085	0/0:25,0:29:69.02:0,69,1152	0/0:7,0:7:18.06:0,18,424	1/1:1,3:4:8.98:104,9,0	1/1:8,20:28:60.01:807,60,0	1/1:8,12:19:39.02:488,39,0	./.
chr10	80911704	.	A	AC	8315.56	PASS	AC=42;AF=0.778;AN=54;BaseQRankSum=3.676;DP=425;FS=5.121;HRun=2;HaplotypeScore=50.8716;InbreedingCoeff=0.8725;MQ=36.83;MQ0=80;MQRankSum=-4.260;QD=26.23;ReadPosRankSum=-0.606;VQSLOD=4.0350;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,14:14:33.07:452,33,0	1/1:3,3:5:9.03:130,9,0	0/0:13,0:2:3:0,3,28	./.	1/1:2,17:19:27.09:388,27,0	1/1:1,12:12:33.11:458,33,0	1/1:9,10:11:24.04:321,24,0	1/1:11,13:16:45.11:618,45,0	0/0:15,0:14:27.08:0,27,333	1/1:1,15:15:42.10:581,42,0	1/1:2,15:16:36.12:518,36,0	0/0:17,0:13:33.10:0,33,406	1/1:2,18:20:51.17:733,51,0	1/1:2,15:15:42.06:557,42,0	1/1:0,11:11:27.05:364,27,0	1/1:1,18:18:50.98:615,51,0	1/1:4,1:1:3.01:43,3,0	1/1:3,3:3:6.02:86,6,0	1/1:5,8:10:24.08:345,24,0	1/1:1,5:6:11.95:126,12,0	1/1:15,8:9:21.07:302,21,0	0/0:9,0:8:9.03:0,9,106	0/0:17,0:16:39.12:0,39,483	0/0:18,0:12:21.06:0,21,260	1/1:2,11:13:32.98:405,33,0	1/1:2,12:13:39.09:538,39,0	1/1:2,14:14:36.12:517,36,0	1/1:6,5:5:15.05:216,15,0
chr10	80911792	.	C	CA	315.75	PASS	AB=0.824;AC=3;AF=0.068;AN=44;BaseQRankSum=-2.101;DP=353;FS=0.000;HRun=4;HaplotypeScore=39.3662;InbreedingCoeff=0.4741;MQ=22.03;MQ0=134;MQRankSum=0.794;QD=11.28;ReadPosRankSum=0.425;VQSLOD=0.6357;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:5:15.04:0,15,169	0/0:8,0:7:21.06:0,21,238	./.	./.	0/0:9,0:9:8.71:0,9,102	1/1:5,9:10:24.04:307,24,0	0/1:11,3:5:21.94:111,0,22	0/0:16,0:7:18.01:0,18,189	0/0:11,0:8:21.06:0,21,237	0/0:20,0:18:51.15:0,51,578	0/0:6,0:5:12.03:0,12,136	0/0:3,0:1:3.01:0,3,34	0/0:8,0:5:12.03:0,12,136	0/0:10,0:8:18.01:0,18,188	0/0:13,0:12:30.09:0,30,340	0/0:8,0:6:9.03:0,9,102	./.	./.	0/0:16,0:13:33.05:0,33,359	0/0:17,0:15:30.08:0,30,339	./.	0/0:16,0:15:45.13:0,45,507	0/0:13,0:12:30.08:0,30,340	0/0:23,0:8:15.04:0,15,170	0/0:8,0:6:12.03:0,12,135	0/0:13,0:12:30.08:0,30,339	0/0:14,0:13:33.09:0,33,374	./.
chr10	80915901	.	AG	A	388.70	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=3.603;DP=608;FS=2.544;HRun=1;HaplotypeScore=39.3272;InbreedingCoeff=0.8152;MQ=38.66;MQ0=75;MQRankSum=-0.868;QD=12.15;ReadPosRankSum=0.137;VQSLOD=1.9557;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:24:72.24:0,72,1135	0/0:9,0:5:6.02:0,6,95	./.	0/0:22,0:6:18.05:0,18,263	0/0:26,0:20:30.10:0,30,477	1/1:0,15:10:27.09:376,27,0	1/1:5,12:4:9.03:126,9,0	0/0:24,0:16:51.17:0,51,814	0/0:18,0:12:36.12:0,36,564	0/0:23,0:14:24.08:0,24,384	0/0:24,0:18:6.02:0,6,95	0/0:16,0:14:42.14:0,42,668	0/0:19,0:18:54.18:0,54,859	0/0:23,0:18:54.18:0,54,855	0/0:22,0:15:15.05:0,15,238	0/0:22,0:14:15.05:0,15,239	0/0:29,0:26:51.17:0,51,803	0/0:17,0:9:14.98:0,15,239	0/0:11,0:8:15.05:0,15,239	0/0:26,0:20:30.10:0,30,477	0/0:28,0:26:48.16:0,48,765	0/0:20,0:16:48.16:0,48,763	0/0:32,0:28:84.29:0,84,1327	0/0:17,0:14:36.12:0,36,573	0/0:28,0:22:36.12:0,36,573	0/0:30,0:24:39.13:0,39,623	0/0:37,0:26:33.11:0,33,524	0/0:5,0:3:9.03:0,9,144
chr10	80919922	.	CT	C	6010.29	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=3.542;DP=344;FS=5.038;HRun=2;HaplotypeScore=66.2779;InbreedingCoeff=0.9555;MQ=53.41;MQ0=27;MQRankSum=-1.880;QD=30.35;ReadPosRankSum=2.040;VQSLOD=4.3912;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:13:27.01:0,27,354	1/1:0,8:8:20.79:272,21,0	0/0:11,0:2:6.02:0,6,90	0/0:18,0:6:10.59:0,11,140	1/1:0,10:10:21.07:272,21,0	0/0:15,0:14:36:0,36,463	0/0:6,0:6:18.03:0,18,246	1/1:3,12:12:33.11:428,33,0	0/0:16,0:16:45.14:0,45,653	1/1:0,11:9:27.02:330,27,0	1/1:1,5:6:9.03:116,9,0	0/0:14,0:14:42.12:0,42,607	0/0:14,0:13:33.03:0,33,445	0/0:9,0:9:18.06:0,18,270	1/1:0,16:16:42.14:545,42,0	1/1:0,16:16:45:583,45,0	1/1:0,24:22:57.19:739,57,0	1/1:0,6:6:15.05:194,15,0	1/1:1,15:14:39.10:489,39,0	1/1:0,5:5:15.05:195,15,0	1/1:1,13:10:15.05:195,15,0	0/0:8,0:8:21.07:0,21,315	0/0:8,0:8:24.08:0,24,345	0/0:12,0:12:36.12:0,36,539	1/1:0,10:10:24.08:311,24,0	1/1:0,20:20:57.14:720,57,0	1/1:1,15:15:36.12:466,36,0	1/1:1,4:4:12.04:156,12,0
chr10	80919949	.	TA	T	1366.84	PASS	AB=0.923;AC=7;AF=0.125;AN=56;BaseQRankSum=1.632;DP=383;FS=3.851;HRun=1;HaplotypeScore=94.6760;InbreedingCoeff=0.8192;MQ=71.93;MQ0=0;MQRankSum=-3.931;QD=23.17;ReadPosRankSum=0.338;VQSLOD=3.6498;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:45.14:579,45,0	0/0:12,0:12:30.10:0,30,480	0/1:11,1:11:11.60:12,0,349	0/0:18,0:16:22.63:0,23,421	0/0:13,0:13:39.13:0,39,620	0/0:12,0:12:27.09:0,27,416	0/0:4,0:4:12.04:0,12,189	0/0:17,0:17:48.16:0,48,767	0/0:21,0:21:63.21:0,63,1005	0/0:11,0:11:33.11:0,33,519	0/0:9,0:9:27.09:0,27,428	0/0:11,0:11:33.11:0,33,524	1/1:0,16:15:39.13:499,39,0	1/1:0,12:12:33.11:424,33,0	0/0:20,0:20:48.16:0,48,766	0/0:14,0:14:42.14:0,42,670	0/0:24,0:23:63.21:0,63,1005	0/0:6,0:6:15.05:0,15,239	0/0:26,0:26:75.25:0,75,1173	0/0:8,0:8:24.08:0,24,384	0/0:7,0:7:18.06:0,18,287	0/0:8,0:8:21.07:0,21,336	0/0:10,0:10:30.10:0,30,480	0/0:12,0:12:36.12:0,36,572	0/0:14,0:14:36.12:0,36,575	0/0:21,0:21:63.21:0,63,977	0/0:18,0:18:51.17:0,51,812	0/0:8,0:8:12.04:0,12,192
chr10	80919952	.	GAA	G	277.68	PASS	AB=0.947;AC=5;AF=0.089;AN=56;BaseQRankSum=0.839;DP=383;FS=2.166;HRun=10;HaplotypeScore=103.4426;InbreedingCoeff=0.7247;MQ=73.50;MQ0=0;MQRankSum=1.258;QD=8.17;ReadPosRankSum=0.812;VQSLOD=1.1887;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:49.48:0,49,316	0/0:11,0:11:30.10:0,30,476	0/0:12,0:12:15.12:0,15,340	0/1:17,0:16:32.71:33,0,301	0/0:13,0:14:36.11:0,36,523	1/1:1,11:12:24.06:268,24,0	1/1:1,3:4:9.02:100,9,0	0/0:17,0:17:42.09:0,42,616	0/0:21,0:21:57.16:0,57,865	0/0:11,0:11:27.04:0,27,381	0/0:9,0:9:27.09:0,27,429	0/0:12,0:12:33.11:0,33,523	0/0:17,0:16:40.98:0,41,277	0/0:12,0:12:31.84:0,32,197	0/0:21,0:21:48.16:0,48,744	0/0:14,0:14:39.13:0,39,617	0/0:23,0:23:63.09:0,63,887	0/0:6,0:6:15.05:0,15,231	0/0:28,0:28:75.23:0,75,1159	0/0:9,0:9:27.09:0,27,429	0/0:7,0:8:21.05:0,21,290	0/0:8,0:8:21.07:0,21,333	0/0:10,0:10:27.08:0,27,405	0/0:11,0:11:33.11:0,33,524	0/0:13,0:13:36.12:0,36,571	0/0:17,0:18:50.66:0,51,769	0/0:19,0:19:51.16:0,51,787	0/0:6,0:6:12.04:0,12,190
chr10	80920131	.	G	GA	9786.75	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-10.475;DP=483;FS=3.882;HRun=6;HaplotypeScore=48.4438;InbreedingCoeff=0.9486;MQ=72.37;MQ0=0;MQRankSum=-1.784;QD=31.07;ReadPosRankSum=1.967;VQSLOD=5.3920;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:60.11:0,60,606	1/1:0,7:7:21.07:261,21,0	0/0:20,0:20:31.46:0,31,195	0/1:1,0:2:1.56:23,0,2	1/1:4,31:35:87.28:1090,87,0	1/1:4,22:26:66.21:830,66,0	1/1:2,10:12:27.09:339,27,0	1/1:5,12:17:33.11:414,33,0	0/0:15,0:15:45.10:0,45,459	1/1:4,27:31:81.26:1019,81,0	1/1:2,21:23:60.15:733,60,0	0/0:12,0:12:33.03:0,33,325	0/0:19,0:19:57.10:0,57,568	0/0:16,0:16:39.08:0,39,397	1/1:1,7:8:21.07:264,21,0	1/1:1,16:17:45.04:566,45,0	1/1:1,14:15:39.12:491,39,0	1/1:4,5:8:17.85:202,18,0	1/1:3,15:18:45.13:552,45,0	1/1:4,21:25:57.06:664,57,0	1/1:1,10:11:30.10:377,30,0	0/0:11,0:11:33.07:0,33,336	0/0:33,0:33:90.20:0,90,917	0/0:17,0:17:42.09:0,42,428	1/1:3,14:17:42.13:528,42,0	1/1:2,16:18:48.15:604,48,0	1/1:1,17:18:48.15:604,48,0	1/1:0,6:6:18.06:226,18,0
chr10	80920344	.	AT	A	11742.94	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=14.497;DP=576;FS=5.197;HRun=2;HaplotypeScore=118.7418;InbreedingCoeff=0.9971;MQ=76.30;MQ0=0;MQRankSum=-1.446;QD=35.37;ReadPosRankSum=0.829;VQSLOD=4.3237;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.23:0,69,1034	1/1:0,13:13:36.12:467,36,0	0/0:18,0:18:54.09:0,54,739	0/0:23,0:23:69:0,69,948	1/1:2,23:25:57.18:740,57,0	0/0:21,0:21:60.20:0,60,895	0/0:20,0:20:57.19:0,57,854	1/1:3,27:30:81.24:1026,81,0	0/0:19,0:19:57.19:0,57,854	1/1:2,42:44:99:1566,123,0	1/1:0,23:23:63.20:818,63,0	0/0:11,0:11:33.09:0,33,473	0/0:17,0:17:51.16:0,51,743	0/0:21,0:21:63.21:0,63,942	1/1:0,6:6:18.06:234,18,0	1/1:0,15:15:45.15:584,45,0	1/1:0,21:21:54.18:701,54,0	1/1:0,15:15:33.11:428,33,0	1/1:0,20:20:60.18:762,60,0	1/1:0,21:21:63.20:812,63,0	1/1:0,23:23:60.20:779,60,0	0/0:19,0:19:57.14:0,57,808	0/0:29,0:29:87.28:0,87,1283	0/0:23,0:23:69.23:0,69,1034	1/1:0,7:7:21.07:273,21,0	1/1:0,33:33:99:1267,99,0	1/1:1,29:30:81.26:1051,81,0	1/1:0,6:6:18.06:234,18,0
chr10	80922322	.	G	GA	748.39	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.765;DP=534;FS=8.250;HRun=7;HaplotypeScore=55.4861;InbreedingCoeff=0.9932;MQ=71.94;MQ0=0;MQRankSum=-1.012;QD=22.01;ReadPosRankSum=1.275;VQSLOD=3.1238;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.09:0,69,661	0/0:8,0:8:21.03:0,21,202	0/0:9,0:8:24:0,24,221	0/0:10,0:10:21.03:0,21,203	0/0:24,0:24:69.09:0,69,660	1/1:2,18:20:42.13:507,42,0	1/1:1,13:14:30.09:362,30,0	0/0:29,0:29:75.08:0,75,711	0/0:17,0:17:51.08:0,51,492	0/0:32,0:31:84.12:0,84,808	0/0:25,0:25:72.10:0,72,691	0/0:10,0:10:30.05:0,30,289	0/0:16,0:16:39.06:0,39,376	0/0:14,0:14:39.06:0,39,377	0/0:17,0:17:42.05:0,42,400	0/0:13,0:13:36.06:0,36,348	0/0:36,0:36:99:0,105,1007	0/0:20,0:19:54.09:0,54,521	0/0:28,0:28:43.73:0,44,663	0/0:17,0:17:51.07:0,51,488	0/0:15,0:15:42.06:0,42,406	0/0:12,0:12:33.05:0,33,319	0/0:11,0:11:27.04:0,27,261	0/0:12,0:12:33.05:0,33,319	0/0:27,0:27:78.12:0,78,753	0/0:20,0:20:60.10:0,60,579	0/0:35,0:35:99:0,99,956	0/0:18,0:18:51.08:0,51,492
chr10	80924160	.	G	GT	12237.62	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-15.450;DP=588;FS=1.977;HRun=7;HaplotypeScore=56.8602;InbreedingCoeff=0.9992;MQ=85.45;MQ0=0;MQRankSum=-4.583;QD=30.59;ReadPosRankSum=-0.664;VQSLOD=4.8517;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.05:0,42,399	1/1:2,13:15:36.07:434,36,0	0/0:27,0:27:68.87:0,69,624	0/0:14,0:14:26.81:0,27,234	1/1:0,30:30:84.22:998,84,0	1/1:2,19:21:51.16:616,51,0	1/1:1,9:10:24.07:290,24,0	1/1:6,29:35:87.25:1037,87,0	0/0:28,0:28:78.12:0,78,753	1/1:3,25:28:75.21:892,75,0	1/1:0,20:20:60.18:725,60,0	0/0:14,0:14:42.05:0,42,400	0/0:13,0:13:30.05:0,30,290	0/0:20,0:20:57.09:0,57,550	1/1:1,17:18:46.38:547,46,0	1/1:1,24:25:66.20:797,66,0	1/1:2,19:21:48.15:580,48,0	1/1:6,16:22:48.11:563,48,0	1/1:6,14:20:45.11:511,45,0	1/1:4,34:38:96.17:1111,96,0	1/1:1,9:10:27.08:326,27,0	0/0:19,0:19:54.08:0,54,522	0/0:26,0:26:69.10:0,69,662	0/0:12,0:12:36.06:0,36,347	1/1:1,20:21:54.17:652,54,0	1/1:2,23:25:72.20:854,72,0	1/1:1,23:24:60.18:724,60,0	1/1:1,16:17:48.15:580,48,0
chr10	80925353	.	GT	G	10304.90	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=10.683;DP=552;FS=0.440;HRun=9;HaplotypeScore=91.0375;InbreedingCoeff=0.9876;MQ=67.28;MQ0=0;MQRankSum=-2.895;QD=22.90;ReadPosRankSum=2.539;VQSLOD=5.3456;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:93.05:851,93,0	1/1:1,7:8:18.01:165,18,0	0/0:12,0:10:21.03:0,21,236	0/0:11,0:10:14.53:0,15,171	1/1:0,25:25:60.01:549,60,0	1/1:2,19:21:51.03:467,51,0	1/1:2,27:29:72.04:659,72,0	1/1:2,25:27:75.04:686,75,0	0/0:13,0:14:38.92:0,39,417	1/1:3,18:21:54.01:490,54,0	1/1:0,13:13:30.01:275,30,0	0/0:13,0:13:36.11:0,36,415	1/1:1,19:20:51.03:467,51,0	1/1:1,9:10:27.01:247,27,0	1/1:3,18:21:51.02:467,51,0	1/1:1,20:21:51.03:467,51,0	1/1:4,27:31:78.03:714,78,0	1/1:2,23:25:63.03:577,63,0	1/1:4,18:21:47.99:433,48,0	1/1:3,18:21:48.01:439,48,0	1/1:1,15:16:42.02:384,42,0	0/0:19,0:19:45.12:0,45,509	0/0:12,1:13:11.64:0,12,376	0/0:20,0:20:57.17:0,57,658	1/1:1,16:17:42.02:384,42,0	1/1:2,26:28:78.01:707,78,0	1/1:4,26:30:72.02:659,72,0	1/1:0,8:8:24.01:220,24,0
chr10	80926989	.	T	TA	11288.86	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-4.518;DP=587;FS=6.093;HRun=9;HaplotypeScore=68.9390;InbreedingCoeff=0.9906;MQ=77.78;MQ0=0;MQRankSum=-3.036;QD=24.02;ReadPosRankSum=1.541;VQSLOD=5.8302;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:22:62.62:318,63,0	1/1:0,4:4:12.03:133,12,0	0/0:16,0:16:23.91:0,24,199	0/0:16,0:17:25.26:0,25,210	1/1:5,35:40:99:1083,102,0	1/1:5,12:17:36.10:398,36,0	1/1:3,11:14:30.08:332,30,0	1/1:4,31:35:93.20:1001,93,0	0/0:16,0:16:41.99:0,42,365	1/1:10,17:27:53.92:569,54,0	1/1:6,21:27:60.16:662,60,0	0/0:10,0:10:26.99:0,27,234	1/1:3,1:20:39.77:199,40,0	1/1:2,0:10:19.89:99,20,0	1/1:1,17:18:48.13:531,48,0	1/1:2,23:25:63.17:697,63,0	1/1:2,20:22:57.09:615,57,0	1/1:5,15:20:19.29:378,19,0	1/1:5,22:28:74.87:791,75,0	1/1:7,29:36:81.15:880,81,0	1/1:1,10:11:30.08:332,30,0	0/0:14,0:14:35.99:0,36,313	0/0:33,0:33:83.97:0,84,729	0/0:11,0:11:32.99:0,33,287	1/1:3,17:21:44.95:479,45,0	1/1:8,21:29:66.17:721,66,0	1/1:2,22:24:54.15:597,54,0	1/1:4,16:20:22.14:472,22,0
chr10	80927191	.	GC	G	8602.48	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=7.293;DP=492;FS=5.431;HRun=5;HaplotypeScore=78.3160;InbreedingCoeff=0.9988;MQ=88.87;MQ0=0;MQRankSum=-3.989;QD=31.40;ReadPosRankSum=-1.422;VQSLOD=4.8780;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.25:0,81,1089	1/1:0,11:11:33.09:374,33,0	0/0:19,0:19:51.17:0,51,693	0/0:17,0:17:45.11:0,45,582	1/1:1,17:18:42.12:476,42,0	0/0:20,0:20:57.18:0,57,763	0/0:14,0:14:39.11:0,39,515	1/1:4,34:38:99:1157,102,0	0/0:17,0:17:45.15:0,45,616	1/1:1,25:26:75.21:851,75,0	1/1:0,13:13:39.11:442,39,0	0/0:23,0:23:63.20:0,63,843	0/0:20,0:20:57.19:0,57,780	0/0:14,0:14:42.14:0,42,574	1/1:0,26:26:75.21:851,75,0	1/1:1,17:18:47.86:544,48,0	1/1:1,14:15:39.11:437,39,0	1/1:0,8:8:24.07:272,24,0	1/1:1,18:19:54.15:612,54,0	1/1:1,19:20:54.15:612,54,0	1/1:0,16:16:45.13:510,45,0	0/0:10,0:10:30.10:0,30,408	0/0:11,0:11:27.09:0,27,369	0/0:26,0:26:75.24:0,75,1007	1/1:0,12:12:30.09:340,30,0	1/1:0,14:14:42.12:476,42,0	1/1:1,12:13:36.10:408,36,0	1/1:0,7:7:21.06:238,21,0
chr10	80927376	.	T	TA	11910.96	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-12.343;DP=488;FS=3.465;HRun=5;HaplotypeScore=42.0753;InbreedingCoeff=0.9198;MQ=63.15;MQ0=0;MQRankSum=-0.547;QD=33.18;ReadPosRankSum=0.684;VQSLOD=5.0897;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.06:0,66,667	1/1:0,11:11:33.02:412,33,0	0/0:4,0:4:9:0,9,83	0/1:4,0:3:8.92:9,0,25	1/1:6,41:47:99:1515,117,0	1/1:2,22:23:57.19:750,57,0	1/1:1,12:13:33.11:434,33,0	1/1:7,17:24:51.09:621,51,0	0/0:14,0:14:39.06:0,39,406	1/1:2,26:28:75.24:985,75,0	1/1:3,20:23:63.12:801,63,0	0/0:15,0:15:36.06:0,36,369	0/0:14,0:14:39.10:0,39,419	0/0:9,0:9:27.07:0,27,290	1/1:1,13:14:36.05:452,36,0	1/1:1,9:10:24.01:294,24,0	1/1:1,16:17:36.12:474,36,0	1/1:0,13:13:36.12:474,36,0	1/1:0,17:16:48.16:632,48,0	1/1:1,20:21:60.14:769,60,0	1/1:0,10:10:27.09:353,27,0	0/0:18,0:18:51.11:0,51,540	0/0:20,0:20:57.14:0,57,612	0/0:11,0:11:30.07:0,30,322	1/1:0,31:31:84.27:1105,84,0	1/1:0,15:14:42.14:553,42,0	1/1:1,21:22:57.10:727,57,0	1/1:0,15:15:42.14:553,42,0
chr10	80927507	.	TTGTGTGTGTGTGTGTGTGTGTGTGTG	T	7966.79	PASS	AB=0.800;AC=29;AF=0.537;AN=54;BaseQRankSum=5.985;DP=410;FS=19.512;HRun=0;HaplotypeScore=245.2412;InbreedingCoeff=0.7442;MQ=61.90;MQ0=13;MQRankSum=-3.314;QD=36.38;ReadPosRankSum=-0.236;VQSLOD=1.8718;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:20:24.08:0,24,1628	1/1:0,4:4:12.04:808,12,0	0/0:16,0:12:5.99:0,6,120	0/0:22,0:18:15.03:0,15,294	1/1:12,5:16:12.47:627,12,0	0/0:7,0:14:18.03:0,18,670	0/0:11,0:14:15.05:0,15,760	1/1:15,5:19:14.98:245,15,0	0/0:15,0:19:29.13:0,29,2683	1/1:15,7:22:18.03:945,18,0	1/1:7,6:11:11.95:439,12,0	0/0:13,0:13:21.07:0,21,1560	0/0:8,0:12:12.04:0,12,852	0/0:3,0:6:3.01:0,3,217	1/1:10,7:16:12.04:808,12,0	1/1:10,8:18:12.09:808,12,0	1/1:10,1:11:3.01:199,3,0	0/1:6,1:8:47.84:371,0,48	1/1:16,0:13:3:27,3,0	1/1:8,7:14:14.96:646,15,0	1/1:9,0:8:3.48:52,3,0	0/0:19,0:19:16.80:0,17,1296	0/0:13,0:13:16.76:0,17,1284	0/0:20,0:19:27.09:0,27,2193	1/1:13,0:12:3.01:53,3,0	1/1:17,8:24:17.96:928,18,0	1/1:4,7:11:15.05:1010,15,0	./.
chr10	80928891	.	GC	G	7800.02	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=0.416;DP=578;FS=4.155;HRun=9;HaplotypeScore=68.9946;InbreedingCoeff=0.9744;MQ=79.56;MQ0=0;MQRankSum=-0.977;QD=22.94;ReadPosRankSum=3.832;VQSLOD=5.8163;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:20:27.23:0,27,146	1/1:1,12:13:36.02:329,36,0	0/0:28,0:27:54.91:0,55,516	0/0:13,0:13:8.02:0,8,119	1/1:4,22:26:63.41:598,63,0	0/0:4,0:22:51.62:0,52,309	0/0:4,0:17:39.92:0,40,212	1/1:5,14:19:39.02:356,39,0	0/0:18,0:18:54.14:0,54,612	1/1:2,25:27:72.03:659,72,0	1/1:2,26:28:66.03:603,66,0	0/0:25,0:25:75.21:0,75,855	0/0:8,0:19:7.72:0,8,35	0/0:7,0:14:14.49:0,14,88	1/1:2,23:25:66.03:604,66,0	1/1:2,21:23:57.03:522,57,0	1/1:1,30:31:87.05:796,87,0	1/1:0,12:12:30.02:274,30,0	1/1:6,18:24:54:489,54,0	1/1:1,21:22:54.01:489,54,0	1/1:1,13:14:33.01:302,33,0	0/0:19,0:19:51.15:0,51,588	0/0:22,0:22:60.18:0,60,692	0/0:21,0:21:57.16:0,57,648	1/1:1,19:20:48.02:439,48,0	1/1:2,15:17:45.01:406,45,0	1/1:3,31:34:87.05:796,87,0	1/1:0,5:5:15.01:137,15,0
chr10	80930114	.	CT	C	977.30	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.248;DP=550;FS=4.425;HRun=10;HaplotypeScore=86.0773;InbreedingCoeff=0.9876;MQ=70.56;MQ0=1;MQRankSum=-0.309;QD=16.29;ReadPosRankSum=-0.006;VQSLOD=3.9404;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,32:37:29.63:713,30,0	0/0:9,0:9:26.66:0,27,176	0/0:16,0:14:32.85:0,33,325	0/0:15,0:10:20.39:0,20,195	0/0:23,0:23:61.97:0,62,389	0/0:3,0:17:37.35:0,37,197	0/0:8,0:24:40.18:0,40,212	0/0:26,0:26:67.06:0,67,400	0/0:9,0:9:21.06:0,21,232	0/0:29,0:29:62.77:0,63,325	0/0:25,0:25:57.89:0,58,363	0/0:19,0:19:42.11:0,42,457	1/1:3,8:12:20.03:162,20,0	1/1:2,9:11:29.49:244,29,0	0/0:14,0:14:34.71:0,35,211	0/0:18,0:18:45.96:0,46,270	0/0:25,0:25:61.82:0,62,402	0/0:23,0:25:67.23:0,67,410	0/0:20,0:20:46.15:0,46,263	0/0:23,0:23:63.96:0,64,397	0/0:23,0:23:63.63:0,64,386	0/0:18,0:18:48.11:0,48,516	0/0:15,0:15:42.11:0,42,464	0/0:23,0:23:66.18:0,66,730	0/0:24,0:24:61.72:0,62,373	0/0:23,0:23:58.37:0,58,343	0/0:22,0:22:58.47:0,58,357	0/0:5,0:5:14.47:0,14,94
chr10	80930705	.	A	AACC	36.70	PASS	AB=1.000;AC=6;AF=0.111;AN=54;BaseQRankSum=-2.334;DP=470;FS=0.000;HRun=0;HaplotypeScore=87.4059;InbreedingCoeff=0.3504;MQ=61.30;MQ0=8;MQRankSum=1.252;QD=0.55;ReadPosRankSum=-2.139;VQSLOD=1.3640;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:17.80:0,18,122	0/0:3,0:3:3:0,3,25	./.	0/0:18,0:14:2.92:0,3,17	0/0:11,0:11:15.01:0,15,137	1/1:6,4:10:3.01:58,3,0	1/1:8,8:16:3.01:59,3,0	0/0:20,0:19:14.85:0,15,118	0/0:20,0:18:24.03:0,24,261	0/0:16,0:16:11.96:0,12,115	0/0:15,0:15:20.91:0,21,177	0/0:20,0:20:27.08:0,27,348	0/0:14,0:14:14.78:0,15,99	0/0:16,0:16:17.82:0,18,123	0/0:19,0:19:24.03:0,24,226	0/0:20,0:18:18.02:0,18,166	0/0:27,0:27:38.91:0,39,334	0/0:18,0:18:17.92:0,18,140	0/0:19,0:17:14.96:0,15,126	0/0:16,0:16:20.75:0,21,156	0/0:21,0:21:18.01:0,18,164	0/0:13,0:13:24.03:0,24,253	0/1:13,0:13:22.94:23,0,129	0/1:28,0:28:2.20:2,0,488	0/0:13,0:12:15.02:0,15,141	0/0:15,0:14:17.94:0,18,159	0/0:19,0:19:26.70:0,27,248	0/0:4,0:4:3:0,3,29
chr10	80930731	.	CCACCACCAACAACAA	C	2055.62	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.256;DP=489;FS=2.086;HRun=0;HaplotypeScore=161.4465;InbreedingCoeff=0.8652;MQ=57.01;MQ0=18;MQRankSum=-6.865;QD=32.63;ReadPosRankSum=3.561;VQSLOD=2.9365;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,30:33:15.70:702,16,0	0/0:4,0:4:12.01:0,12,234	0/0:12,0:4:6.49:0,6,108	0/0:12,0:3:9.03:0,9,223	0/0:16,0:16:38.75:0,39,750	0/0:11,0:11:21.06:0,21,647	0/0:23,0:23:48.57:0,49,1925	0/0:19,0:18:51.11:0,51,1039	0/0:17,0:17:51.13:0,51,2474	0/0:19,0:19:48.07:0,48,1228	0/0:18,0:17:47.17:0,47,1237	0/0:20,0:20:54.16:0,54,2683	1/1:0,9:9:18.06:782,18,0	1/1:1,15:16:17.69:708,18,0	0/0:19,0:19:27.09:0,27,1038	0/0:13,0:12:21.05:0,21,762	0/0:23,0:23:38.87:0,39,1556	0/0:15,0:15:24.08:0,24,681	0/0:21,0:13:36.04:0,36,781	0/0:15,0:15:35.94:0,36,870	0/0:29,0:26:18.06:0,18,773	0/0:17,0:17:51.17:0,51,1878	0/0:16,0:16:42.13:0,42,2336	0/0:22,0:22:62.03:0,62,3739	0/0:20,0:18:20.94:0,21,607	0/0:22,0:21:54.58:0,55,1111	0/0:21,0:21:27.56:0,28,1100	0/0:2,0:2:3.01:0,3,143
chr10	80930737	.	CCAA	C	3566.51	PASS	AB=0.700;AC=37;AF=0.661;AN=56;BaseQRankSum=10.677;DP=503;FS=9.164;HRun=0;HaplotypeScore=78.6733;InbreedingCoeff=0.8597;MQ=57.91;MQ0=16;MQRankSum=3.823;QD=10.40;ReadPosRankSum=2.983;VQSLOD=2.3901;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:29:14.38:104,14,0	1/1:4,0:4:11.97:96,12,0	0/0:12,0:7:8.16:0,8,95	0/0:15,0:7:11.14:0,11,130	1/1:4,13:17:20.73:176,21,0	0/0:9,0:9:17.93:0,18,164	0/0:21,0:21:40.29:0,40,496	1/1:21,0:20:35:293,35,0	0/0:17,0:17:38.94:0,39,494	1/1:2,19:21:50.13:449,50,0	1/1:5,15:19:17.17:203,17,0	0/0:21,0:21:32.76:0,33,706	1/1:9,0:9:17.78:121,18,0	1/1:15,0:15:14.54:104,15,0	1/1:3,16:19:18.06:256,18,0	1/1:4,6:9:8.92:128,9,0	1/1:6,18:24:23.57:308,24,0	0/1:8,6:14:0.05:38,0,0	1/1:12,8:13:25.60:224,26,0	1/1:3,12:15:19.94:200,20,0	1/1:6,27:30:9.03:128,9,0	0/0:24,0:24:13.20:0,13,515	0/0:19,0:19:51.02:0,51,645	0/0:20,0:20:54.15:0,54,954	1/1:8,12:18:6.02:85,6,0	1/1:5,19:23:20.78:396,21,0	1/1:4,16:20:14.94:213,15,0	1/1:0,3:3:3.01:43,3,0
chr10	80932515	.	TCAAGAC	T	3722.17	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.709;DP=578;FS=0.000;HRun=0;HaplotypeScore=134.3276;InbreedingCoeff=0.9753;MQ=83.14;MQ0=0;MQRankSum=-12.048;QD=50.99;ReadPosRankSum=-0.820;VQSLOD=3.4522;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:42.05:871,42,0	0/0:13,0:13:33.10:0,33,1067	0/0:26,0:26:75.24:0,75,2479	0/0:9,0:9:27.09:0,27,922	0/0:34,0:34:93.29:0,93,3005	0/0:21,0:21:63.22:0,63,2194	0/0:10,0:10:30.09:0,30,976	0/0:33,0:33:90.27:0,90,2688	0/0:19,0:19:51.15:0,51,1583	0/0:27,0:27:75.25:0,75,2548	0/0:26,0:26:78.25:0,78,2612	0/0:10,0:10:24.07:0,24,767	1/1:1,30:31:78.27:1808,78,0	1/1:1,21:22:45.15:1043,45,0	0/0:22,0:21:63.22:0,63,2170	0/0:29,0:29:87.26:0,87,2816	0/0:3,0:3:9.03:0,9,318	0/0:6,0:6:18.06:0,18,626	0/0:17,0:17:48.14:0,48,1461	0/0:19,0:19:57.18:0,57,1911	0/0:27,0:27:78.27:0,78,2740	0/0:23,0:23:69.24:0,69,2421	0/0:16,0:16:45.15:0,45,1565	0/0:16,0:16:48.16:0,48,1587	0/0:28,0:28:81.28:0,81,2775	0/0:29,0:29:81.26:0,81,2729	0/0:32,0:32:96.30:0,96,3144	0/0:10,0:10:30.10:0,30,1029
chr10	80932634	.	TGATA	T	1593.57	PASS	AB=0.667;AC=7;AF=0.135;AN=52;BaseQRankSum=8.774;DP=601;FS=7.816;HRun=0;HaplotypeScore=108.1881;InbreedingCoeff=0.7489;MQ=56.11;MQ0=4;MQRankSum=0.541;QD=17.32;ReadPosRankSum=0.672;VQSLOD=2.9662;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:39.61:0,40,884	1/1:3,8:11:21.07:331,21,0	./.	./.	0/0:24,0:24:27.09:0,27,641	0/0:10,0:17:8.99:0,9,90	0/0:20,0:20:1.79:0,2,48	0/0:45,0:43:39.09:0,39,758	0/0:27,0:27:42.14:0,42,998	0/0:26,0:26:51.17:0,51,1153	0/0:24,0:24:33.11:0,33,782	0/0:16,0:17:14.30:0,14,903	1/1:9,20:29:30.10:472,30,0	1/1:12,14:26:27.09:423,27,0	0/0:20,0:20:42.13:0,42,940	0/0:23,0:23:48.16:0,48,1103	0/0:12,0:12:24.08:0,24,570	0/0:10,0:13:12.84:0,13,184	0/0:16,0:15:27.09:0,27,614	0/0:41,0:41:84.27:0,84,1925	0/0:19,0:19:24.08:0,24,564	0/0:24,0:24:33.11:0,33,740	0/0:16,0:16:27.09:0,27,594	0/0:18,0:18:27.09:0,27,614	0/1:13,13:26:99:513,0,352	0/0:24,0:24:51.17:0,51,1182	0/0:26,0:26:57.16:0,57,1277	0/0:10,0:10:21.07:0,21,472
chr10	80933093	.	A	AAACTAC	39440.84	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-6.656;DP=654;FS=20.804;HRun=0;HaplotypeScore=123.1896;InbreedingCoeff=0.9853;MQ=81.20;MQ0=0;MQRankSum=-18.215;QD=85.93;ReadPosRankSum=0.799;VQSLOD=4.3971;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,19:33:63.17:2164,63,0	1/1:4,8:12:30.10:1022,30,0	0/0:27,0:27:75.19:0,75,1610	0/0:22,0:22:57.08:0,57,1149	1/1:7,28:39:78.22:2642,78,0	0/0:22,0:22:66.21:0,66,1573	0/0:17,0:17:51.11:0,51,1041	1/1:16,10:30:84.27:2714,84,0	0/0:22,0:22:63.22:0,63,1545	1/1:5,16:21:59.78:2102,60,0	1/1:7,24:33:84.25:2750,84,0	0/0:21,0:21:63.21:0,63,1503	1/1:6,25:33:87.30:3111,87,0	1/1:3,18:24:60.21:2126,60,0	1/1:1,17:19:48.16:1747,48,0	1/1:6,21:28:81.28:2817,81,0	1/1:2,10:14:27.09:985,27,0	1/1:1,3:5:12.04:439,12,0	1/1:6,13:20:54.18:1871,54,0	1/1:7,37:49:99:4588,135,0	1/1:6,6:17:21.07:756,21,0	0/0:25,0:25:75.24:0,75,1751	0/0:25,0:25:69.24:0,69,1676	0/0:14,0:14:42.14:0,42,1033	1/1:4,23:29:75.26:2720,75,0	1/1:2,20:25:75.23:2435,75,0	1/1:4,18:24:60.21:2124,60,0	1/1:0,4:4:9.03:329,9,0
chr10	80934187	.	A	AT	1515.82	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=0.371;DP=498;FS=5.516;HRun=8;HaplotypeScore=51.7270;InbreedingCoeff=0.9642;MQ=75.30;MQ0=0;MQRankSum=-1.058;QD=24.45;ReadPosRankSum=1.130;VQSLOD=4.3879;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,14:20:48.14:554,48,0	0/0:10,0:10:27:0,27,242	0/0:15,0:14:23.23:0,23,214	0/0:6,0:6:9:0,9,82	0/0:27,0:27:78.02:0,78,708	0/0:15,0:15:36:0,36,325	0/0:6,0:6:18.01:0,18,165	0/0:25,0:25:63.02:0,63,573	0/0:11,0:11:33.02:0,33,302	0/0:26,0:26:72.03:0,72,657	0/0:22,0:22:60.01:0,60,540	0/0:20,0:20:54.01:0,54,490	1/1:4,16:20:45.13:519,45,0	1/1:5,17:22:51.15:586,51,0	0/0:18,0:17:54.03:0,54,494	0/0:17,0:17:45.02:0,45,412	0/0:16,0:16:39.02:0,39,357	0/0:10,0:10:30.02:0,30,275	0/0:20,0:20:47.99:0,48,432	0/0:22,0:22:59.99:0,60,536	0/0:18,0:18:54.03:0,54,494	0/0:20,0:20:57.02:0,57,517	0/0:14,0:14:42.01:0,42,380	0/0:5,0:5:15.01:0,15,137	0/0:21,0:21:57.02:0,57,521	0/0:34,0:34:93.05:0,93,851	0/0:33,0:32:95.99:0,96,865	0/0:5,0:5:15.01:0,15,137
chr10	80934307	.	CAA	C	2471	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.735;DP=625;FS=10.237;HRun=3;HaplotypeScore=77.2215;InbreedingCoeff=0.9998;MQ=88.87;MQ0=0;MQRankSum=-4.579;QD=33.85;ReadPosRankSum=4.553;VQSLOD=2.4861;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:59.72:917,60,0	0/0:15,0:15:45.15:0,45,869	0/0:30,0:30:87.27:0,87,1576	0/0:24,0:24:50.17:0,50,831	0/0:26,0:26:75.22:0,75,1327	0/0:23,0:23:69.24:0,69,1333	0/0:14,0:14:42.14:0,42,811	0/0:35,0:35:99:0,105,1938	0/0:14,0:14:42.14:0,42,780	0/0:25,0:25:68.92:0,69,1303	0/0:23,0:23:69.22:0,69,1272	0/0:24,0:24:72.25:0,72,1380	1/1:0,26:26:72.24:1100,72,0	1/1:0,17:17:39.13:596,39,0	0/0:19,0:19:57.20:0,57,1101	0/0:24,0:24:72.25:0,72,1391	0/0:14,0:14:42.14:0,42,811	0/0:14,0:14:39.10:0,39,716	0/0:25,0:25:75.25:0,75,1418	0/0:33,0:33:99:0,99,1881	0/0:27,0:27:81.21:0,81,1462	0/0:22,0:22:66.23:0,66,1275	0/0:17,0:17:48.16:0,48,927	0/0:17,0:17:51.17:0,51,977	0/0:14,0:14:42.14:0,42,812	0/0:29,0:29:87.28:0,87,1590	0/0:33,0:33:96.28:0,96,1755	0/0:11,0:11:33.11:0,33,637
chr10	80935087	.	C	CT	3457.60	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=8.970;DP=454;FS=0.000;HRun=8;HaplotypeScore=104.4812;InbreedingCoeff=0.6789;MQ=76.58;MQ0=1;MQRankSum=-7.183;QD=9.91;ReadPosRankSum=4.702;VQSLOD=1.7400;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:36,3:39:84.77:673,85,0	1/1:7,0:7:5.60:55,6,0	0/1:27,0:13:1.57:2,0,157	0/0:18,1:18:3.06:0,3,175	1/1:22,0:23:29.97:247,30,0	0/0:9,0:9:27.01:0,27,247	0/0:12,0:12:30.01:0,30,274	0/1:20,0:20:6.58:99,0,7	0/0:10,0:10:20.80:0,21,176	1/1:24,0:24:25.10:221,25,0	1/1:26,0:26:18.89:209,19,0	0/0:18,0:18:20.86:0,21,294	1/1:15,1:16:41.66:275,42,0	1/1:13,1:14:27.87:222,28,0	1/1:11,0:10:20.61:135,21,0	0/1:11,0:11:9.70:80,0,10	1/1:18,0:19:40.93:260,41,0	1/1:17,0:17:23.39:161,23,0	0/1:15,0:15:7.01:82,0,7	1/1:14,0:13:5.01:80,5,0	1/1:10,0:10:17.29:102,17,0	0/0:9,0:9:24.01:0,24,220	0/0:10,0:10:27.01:0,27,247	0/0:17,0:17:36:0,36,324	1/1:14,0:13:14.32:132,14,0	1/1:17,0:17:17.26:120,17,0	1/1:15,0:15:10.61:182,11,0	1/1:9,0:9:20.20:119,20,0
chr10	80935094	.	T	TC	6287.60	PASS	AB=0.888;AC=34;AF=0.607;AN=56;BaseQRankSum=2.829;DP=427;FS=1.318;HRun=0;HaplotypeScore=87.2138;InbreedingCoeff=0.7250;MQ=72.32;MQ0=4;MQRankSum=2.802;QD=20.22;ReadPosRankSum=0.044;VQSLOD=6.1605;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:69.76:70,0,113	1/1:1,7:8:11.40:134,11,0	0/0:23,0:9:18.66:0,19,231	0/0:18,0:16:33.72:0,34,354	1/1:1,19:20:57.13:675,57,0	0/0:9,0:9:27.09:0,27,377	0/0:12,0:11:33.06:0,33,437	1/1:5,16:21:45.88:427,46,0	0/0:8,0:8:23.43:0,23,282	1/1:2,21:23:59.82:678,60,0	1/1:1,23:24:45.73:628,46,0	0/0:16,0:16:48.08:0,48,580	0/1:17,0:17:2.05:2,0,91	0/1:12,0:12:13.08:13,0,65	1/1:1,8:9:21.94:279,22,0	0/1:2,9:11:26.84:153,0,27	1/1:1,20:21:41.90:592,42,0	1/1:1,14:14:29.13:388,29,0	1/1:2,12:13:31.60:330,32,0	1/1:1,12:12:25.05:244,25,0	1/1:1,9:10:18.02:232,18,0	0/0:8,0:8:24.08:0,24,335	0/0:10,0:10:30.07:0,30,391	0/0:12,0:12:36.12:0,36,501	1/1:2,13:14:26.76:345,27,0	1/1:2,15:16:45.07:466,45,0	1/1:2,11:14:22.72:358,23,0	1/1:1,8:9:21.04:275,21,0
chr10	80935096	.	CT	C	144.65	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.019;DP=420;FS=16.387;HRun=9;HaplotypeScore=109.7851;InbreedingCoeff=0.8296;MQ=70.59;MQ0=5;MQRankSum=-7.775;QD=2.19;ReadPosRankSum=-0.278;VQSLOD=-0.4646;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,3:38:26.87:161,27,0	0/0:7,0:8:8.17:0,8,34	0/0:23,0:9:6.47:0,6,63	0/0:17,0:15:6.52:0,7,205	0/0:22,0:21:38.81:0,39,158	0/0:9,0:9:21.05:0,21,234	0/0:13,0:11:27.06:0,27,297	0/0:18,0:20:34.65:0,35,159	0/0:7,0:7:15.04:0,15,173	0/0:21,0:21:42.31:0,42,188	0/0:23,0:23:48.15:0,48,213	0/0:14,0:14:41.48:0,41,448	1/1:15,2:17:17.05:84,17,0	1/1:10,1:11:4.32:31,4,0	0/0:10,0:10:19.42:0,19,82	0/0:10,0:10:16.62:0,17,98	0/0:21,0:21:37.60:0,38,150	0/0:16,0:14:24.11:0,24,98	0/0:14,0:13:21.88:0,22,99	0/0:12,0:11:16.29:0,16,80	0/0:10,0:10:16.14:0,16,66	0/0:9,0:9:18.05:0,18,208	0/0:11,0:11:27.02:0,27,284	0/0:12,0:12:27.08:0,27,312	0/0:15,0:15:21.25:0,21,98	0/0:13,0:12:27.48:0,27,129	0/0:14,0:14:33.40:0,33,169	0/0:9,0:9:18.36:0,18,73
chr10	80935289	.	G	GTGGATT	12437.54	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=8.418;DP=375;FS=0.000;HRun=0;HaplotypeScore=104.2423;InbreedingCoeff=0.9598;MQ=79.79;MQ0=7;MQRankSum=-14.266;QD=72.73;ReadPosRankSum=-4.127;VQSLOD=4.4617;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:48.16:0,48,1143	1/1:1,5:6:12.04:412,12,0	0/0:31,0:23:59.38:0,59,1168	0/0:33,0:18:30.54:0,31,999	1/1:5,9:16:39.09:963,39,0	0/0:13,0:13:39.13:0,39,944	0/0:30,0:30:84.17:0,84,1648	1/1:3,12:16:48.12:1620,48,0	0/0:8,0:8:24.05:0,24,481	1/1:4,2:8:21.07:734,21,0	1/1:1,7:8:20.10:493,20,0	0/0:7,0:7:18.05:0,18,390	0/0:13,0:13:30.03:0,30,654	0/0:14,0:14:36.10:0,36,834	1/1:2,13:15:36.12:1057,36,0	1/1:0,5:5:12.04:406,12,0	1/1:2,9:12:10.41:858,10,0	1/1:1,3:4:12.04:415,12,0	1/1:2,3:5:12.04:395,12,0	1/1:2,7:9:23.11:626,23,0	1/1:5,15:23:42.82:1163,43,0	0/0:3,0:3:9.03:0,9,221	0/0:6,0:6:17.89:0,18,383	0/0:21,0:21:54.19:0,54,1313	1/1:4,12:16:39.09:1094,39,0	1/1:2,11:13:36.08:1104,36,0	1/1:3,7:10:27.09:871,27,0	1/1:2,2:5:11.96:227,12,0
chr10	80937139	.	CT	C	1512.56	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.763;DP=593;FS=1.189;HRun=4;HaplotypeScore=62.9544;InbreedingCoeff=0.9990;MQ=62.83;MQ0=0;MQRankSum=0.661;QD=28.54;ReadPosRankSum=2.627;VQSLOD=3.6216;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:51.07:612,51,0	0/0:9,0:9:27.09:0,27,376	0/0:21,0:17:48.15:0,48,656	0/0:13,0:11:33.11:0,33,462	0/0:34,0:34:99:0,102,1424	0/0:21,0:21:60.17:0,60,801	0/0:11,0:11:30.10:0,30,419	0/0:27,0:27:75.21:0,75,1010	0/0:16,0:16:45.15:0,45,628	0/0:38,0:38:99:0,102,1424	0/0:25,0:25:72.24:0,72,1005	0/0:16,0:16:45.15:0,45,630	1/1:0,13:13:30.09:360,30,0	1/1:0,20:20:57.17:684,57,0	0/0:19,0:19:54.17:0,54,736	0/0:20,0:20:57.18:0,57,783	0/0:21,0:21:42.66:0,43,787	0/0:30,0:30:78.72:0,79,1076	0/0:16,0:16:42.14:0,42,586	0/0:31,0:31:93.26:0,93,1230	0/0:24,0:24:69.23:0,69,966	0/0:20,0:20:57.19:0,57,797	0/0:25,0:25:69.23:0,69,960	0/0:12,0:12:33.11:0,33,462	0/0:20,0:20:57.18:0,57,780	0/0:20,0:20:54.17:0,54,741	0/0:31,0:31:90.28:0,90,1218	0/0:20,0:20:60.20:0,60,840
chr10	80937441	.	TA	T	1507.49	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.386;DP=457;FS=2.738;HRun=4;HaplotypeScore=50.0325;InbreedingCoeff=0.9931;MQ=69.09;MQ0=0;MQRankSum=-1.496;QD=26.92;ReadPosRankSum=2.749;VQSLOD=2.5875;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:51.57:592,52,0	0/0:5,0:5:15.04:0,15,190	0/0:10,0:10:26.72:0,27,258	0/0:12,0:12:28.98:0,29,373	0/0:20,0:20:54.17:0,54,727	0/0:22,0:22:66.22:0,66,909	0/0:12,0:12:36.07:0,36,445	0/0:27,0:27:81.21:0,81,1030	0/0:18,0:18:54.15:0,54,711	0/0:20,0:20:57.13:0,57,738	0/0:18,0:18:51.14:0,51,661	0/0:15,0:15:45.14:0,45,606	1/1:0,15:15:36.04:413,36,0	1/1:0,21:21:54.17:645,54,0	0/0:18,0:18:51.16:0,51,686	0/0:13,0:13:39.10:0,39,504	0/0:11,0:11:33.05:0,33,415	0/0:17,0:17:51.11:0,51,663	0/0:14,0:14:36.07:0,36,432	0/0:24,0:24:72.23:0,72,980	0/0:14,0:14:42.09:0,42,542	0/0:12,0:12:36.09:0,36,463	0/0:10,0:10:30.09:0,30,390	0/0:12,0:12:36.11:0,36,481	0/0:20,0:20:60.19:0,60,809	0/0:22,0:22:63.16:0,63,790	0/0:24,0:24:72.22:0,72,961	0/0:11,0:11:33.11:0,33,455
chr10	80937879	.	T	TGCATCAGATTATTAGATTATCAGATTA	15619.25	PASS	AB=0.907;AC=6;AF=0.107;AN=56;BaseQRankSum=8.379;DP=708;FS=10.297;HRun=0;HaplotypeScore=440.6908;InbreedingCoeff=0.6249;MQ=53.26;MQ0=8;MQRankSum=-12.780;QD=143.30;ReadPosRankSum=-0.362;VQSLOD=3.4625;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:33.11:2374,33,0	0/0:12,0:12:33.11:0,33,1840	0/0:19,0:10:24.03:0,24,737	0/0:16,0:8:21.06:0,21,680	0/0:34,0:34:96.33:0,96,6193	0/0:28,0:27:81.28:0,81,4781	0/0:19,0:19:54.19:0,54,2801	0/0:45,0:44:99:0,129,6573	0/0:19,0:19:57.20:0,57,3207	0/0:27,0:27:78.26:0,78,4413	0/0:32,0:32:96.30:0,96,5313	0/1:21,1:22:99:318,0,3535	1/1:32,6:36:99:7361,99,0	0/1:25,3:28:99:5566,0,164	0/0:31,0:31:87.30:0,87,4862	0/0:26,0:25:75.26:0,75,4716	0/0:37,0:36:99:0,99,6391	0/0:29,0:29:84.29:0,84,5407	0/0:23,0:16:48.16:0,48,2654	0/0:32,0:32:93.31:0,93,5679	0/0:24,0:24:69.24:0,69,4299	0/0:26,0:26:75.26:0,75,4642	0/0:24,0:24:69.24:0,69,4732	0/0:15,0:15:39.09:0,39,2297	0/0:17,0:16:42.14:0,42,2304	0/0:22,0:22:66.22:0,66,4382	0/0:30,0:29:87.30:0,87,4995	0/0:12,0:12:33.11:0,33,2005
chr10	80938278	.	A	AT	1048.94	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.493;DP=595;FS=0.674;HRun=6;HaplotypeScore=88.8938;InbreedingCoeff=0.8795;MQ=59.91;MQ0=0;MQRankSum=2.525;QD=29.14;ReadPosRankSum=0.005;VQSLOD=3.8320;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:57.04:0,57,567	0/0:12,0:12:33.07:0,33,337	0/0:5,0:5:0.72:0,1,106	0/0:15,0:15:28.59:0,29,297	0/0:41,0:39:99:0,104,1045	1/1:1,22:23:57.18:717,57,0	1/1:1,12:13:36.12:453,36,0	0/0:19,0:19:42.08:0,42,423	0/0:11,0:11:30.06:0,30,306	0/0:32,0:31:90.21:0,90,918	0/0:37,0:35:99:0,105,1053	0/0:22,0:22:54.11:0,54,551	0/0:24,0:24:66.15:0,66,673	0/0:17,0:17:39.08:0,39,398	0/0:13,0:13:36.06:0,36,361	0/0:20,0:20:54.10:0,54,543	0/0:31,0:31:81.15:0,81,818	0/0:24,0:24:66.96:0,67,654	0/0:20,0:20:57.13:0,57,580	0/0:35,0:35:90.20:0,90,918	0/0:10,0:10:27.06:0,27,275	0/0:17,0:15:24.04:0,24,245	0/0:31,0:27:72.16:0,72,735	0/0:6,0:6:15.03:0,15,153	0/0:23,0:22:66.15:0,66,673	0/0:25,0:25:69.15:0,69,704	0/0:29,0:29:81.18:0,81,826	0/0:14,0:14:42.10:0,42,428
chr10	80938769	.	ATAGTC	A	2803.21	PASS	AB=0.543;AC=5;AF=0.089;AN=56;BaseQRankSum=10.896;DP=663;FS=10.254;HRun=0;HaplotypeScore=121.7171;InbreedingCoeff=0.7773;MQ=56.06;MQ0=7;MQRankSum=-10.431;QD=40.05;ReadPosRankSum=0.155;VQSLOD=2.8299;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:3,16:19:37.10:636,0,37	0/0:10,0:10:27.09:0,27,825	0/0:31,0:19:51.15:0,51,1381	0/0:30,0:16:48.16:0,48,1254	0/0:34,0:34:99:0,99,3110	0/0:21,0:21:63.22:0,63,1940	0/0:23,0:23:66.16:0,66,1960	0/0:35,0:35:99:0,105,3193	0/0:21,0:21:63.22:0,63,2036	0/0:33,0:33:93.31:0,93,2840	0/0:21,0:21:63.22:0,63,1820	0/0:24,0:24:72.25:0,72,2297	1/1:1,21:22:39.07:820,39,0	1/1:1,28:29:69.24:1477,69,0	0/0:27,0:27:81.28:0,81,2593	0/0:23,0:23:69.24:0,69,2124	0/0:22,0:22:66.14:0,66,1944	0/0:26,0:26:72.25:0,72,2184	0/0:16,0:15:42.14:0,42,1166	0/0:25,0:25:75.26:0,75,2383	0/0:22,0:22:66.23:0,66,1986	0/0:23,0:23:66.22:0,66,1961	0/0:28,0:28:81.26:0,81,2423	0/0:15,0:15:45.15:0,45,1393	0/0:18,0:18:54.17:0,54,1603	0/0:28,0:28:84.27:0,84,2488	0/0:31,0:31:93.29:0,93,2777	0/0:6,0:6:18.06:0,18,581
chr10	80939061	.	AT	A	871.16	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.346;DP=448;FS=2.317;HRun=6;HaplotypeScore=49.2571;InbreedingCoeff=0.9885;MQ=77.95;MQ0=0;MQRankSum=-6.485;QD=22.34;ReadPosRankSum=2.549;VQSLOD=2.9382;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:21:48.04:485,48,0	0/0:6,0:6:15.05:0,15,197	0/0:13,0:13:36.11:0,36,459	0/0:10,0:10:20.74:0,21,238	0/0:35,0:35:99:0,105,1378	0/0:13,0:13:36.12:0,36,474	0/0:13,0:13:39.13:0,39,513	0/0:26,0:26:57.18:0,57,736	0/0:13,0:13:33.11:0,33,434	0/0:24,0:24:72.23:0,72,947	0/0:23,0:23:63.18:0,63,801	0/0:20,0:20:54.16:0,54,696	1/1:0,7:7:21.05:223,21,0	1/1:1,10:11:30.04:306,30,0	0/0:14,0:14:42.12:0,42,538	0/0:13,0:13:39.12:0,39,500	0/0:18,0:18:51.17:0,51,671	0/0:15,0:15:39.13:0,39,507	0/0:13,0:13:36.11:0,36,460	0/0:28,0:28:81.26:0,81,1054	0/0:10,0:10:27.09:0,27,355	0/0:10,0:10:27.09:0,27,352	0/0:16,0:16:45.13:0,45,578	0/0:12,0:12:33.10:0,33,419	0/0:17,0:17:42.13:0,42,539	0/0:19,0:19:54.17:0,54,698	0/0:18,0:18:48.16:0,48,632	0/0:10,0:10:20.88:0,21,276
chr10	80939254	.	CT	C	302.25	PASS	AB=0.933;AC=7;AF=0.125;AN=56;BaseQRankSum=7.418;DP=432;FS=23.290;HRun=1;HaplotypeScore=65.9194;InbreedingCoeff=0.8447;MQ=80.62;MQ0=0;MQRankSum=-3.527;QD=8.64;ReadPosRankSum=0.786;VQSLOD=-0.4362;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:11.93:90,12,0	0/0:4,0:4:12.04:0,12,192	0/1:13,1:14:4.18:4,0,565	0/0:9,0:9:23.74:0,24,335	0/0:18,0:18:54.16:0,54,838	0/0:20,0:20:60.20:0,60,959	0/0:5,0:5:15.05:0,15,240	0/0:37,0:37:99:0,111,1732	0/0:18,0:18:48.14:0,48,722	0/0:21,0:21:60.20:0,60,960	0/0:20,0:20:57.19:0,57,911	0/0:23,0:23:69.24:0,69,1103	1/1:1,7:8:20.86:160,21,0	1/1:1,7:8:23.86:188,24,0	0/0:12,0:12:36.12:0,36,572	0/0:12,0:12:36.12:0,36,573	0/0:19,0:19:57.19:0,57,899	0/0:5,0:5:15.04:0,15,218	0/0:13,0:13:39.13:0,39,624	0/0:30,0:30:84.29:0,84,1343	0/0:16,0:16:45.14:0,45,691	0/0:12,0:12:36.11:0,36,552	0/0:18,0:18:54.18:0,54,860	0/0:8,0:8:24.06:0,24,357	0/0:19,0:19:54.18:0,54,863	0/0:27,0:27:81.28:0,81,1294	0/0:20,0:20:54.17:0,54,840	0/0:11,0:11:30.10:0,30,480
chr10	80939256	.	AG	A	368.73	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.935;DP=432;FS=26.565;HRun=1;HaplotypeScore=67.3787;InbreedingCoeff=0.9659;MQ=83.28;MQ0=0;MQRankSum=-3.647;QD=16.76;ReadPosRankSum=0.076;VQSLOD=2.2711;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,5:7:20.89:160,21,0	0/0:4,0:4:12.04:0,12,192	0/0:16,0:16:37.27:0,37,680	0/0:9,1:10:17.98:0,18,254	0/0:17,0:17:51.17:0,51,812	0/0:20,0:20:60.20:0,60,959	0/0:6,0:6:18.04:0,18,258	0/0:36,0:36:99:0,108,1687	0/0:17,0:17:45.15:0,45,719	0/0:21,0:21:63.20:0,63,968	0/0:20,0:20:57.19:0,57,909	0/0:23,0:23:69.24:0,69,1103	1/1:0,7:7:20.86:161,21,0	1/1:1,7:8:23.86:189,24,0	0/0:11,0:11:33.11:0,33,527	0/0:14,0:14:42.13:0,42,646	0/0:18,0:18:54.18:0,54,862	0/0:4,0:4:12.04:0,12,191	0/0:13,0:13:39.13:0,39,624	0/0:30,0:30:84.27:0,84,1317	0/0:17,0:17:48.13:0,48,717	0/0:12,0:12:36.12:0,36,575	0/0:17,0:17:51.17:0,51,813	0/0:6,0:6:18.06:0,18,288	0/0:20,0:20:57.15:0,57,883	0/0:27,0:27:81.27:0,81,1275	0/0:20,0:20:54.17:0,54,839	0/0:11,0:11:30.10:0,30,479
chr10	80939278	.	T	TA	8504.43	PASS	AB=0.632;AC=41;AF=0.732;AN=56;BaseQRankSum=-8.211;DP=410;FS=7.304;HRun=9;HaplotypeScore=46.4294;InbreedingCoeff=0.8762;MQ=76.57;MQ0=0;MQRankSum=-2.335;QD=26.09;ReadPosRankSum=-0.138;VQSLOD=5.0879;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,10:12:27.07:299,27,0	1/1:1,4:5:9.02:100,9,0	0/0:12,0:13:24.70:0,25,231	0/0:4,0:5:2.87:0,3,15	1/1:3,15:18:39.04:416,39,0	1/1:2,21:23:63.17:697,63,0	1/1:0,6:6:15.04:166,15,0	1/1:4,27:31:52.11:778,52,0	0/0:16,0:16:38.98:0,39,339	1/1:0,15:15:45.11:490,45,0	1/1:3,20:23:60:645,60,0	0/0:20,0:21:55.98:0,56,469	1/1:0,11:11:27.07:298,27,0	0/1:5,7:12:1.99:208,0,2	1/1:1,14:15:36.10:398,36,0	1/1:0,12:12:36.10:398,36,0	1/1:2,12:14:33.09:365,33,0	1/1:2,3:5:6.02:66,6,0	1/1:4,11:15:33.09:365,33,0	1/1:5,24:29:71.97:726,72,0	1/1:1,15:16:39.11:431,39,0	0/0:7,0:7:18:0,18,156	0/0:16,0:16:44.99:0,45,390	0/0:6,0:6:18:0,18,156	1/1:5,12:17:33.09:365,33,0	1/1:2,18:20:28.07:529,28,0	1/1:1,16:18:45.12:498,45,0	1/1:0,8:8:24.06:265,24,0
chr10	80939643	.	TACACACACACACATACAC	T	2589.08	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.502;DP=502;FS=0.000;HRun=0;HaplotypeScore=218.5084;InbreedingCoeff=0.8623;MQ=60.83;MQ0=12;MQRankSum=-3.829;QD=40.45;ReadPosRankSum=2.367;VQSLOD=2.8880;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,26:31:18.06:869,18,0	0/0:5,0:5:3.01:0,3,236	0/0:25,0:12:18.04:0,18,252	0/0:36,0:19:16.79:0,17,397	0/0:20,0:20:21.48:0,21,539	0/0:25,0:25:33.09:0,33,1802	0/0:9,0:9:12.01:0,12,401	0/0:25,0:25:60.10:0,60,2382	0/0:13,0:13:27.08:0,27,1879	0/0:24,0:23:51.10:0,51,2144	0/0:13,0:13:15.50:0,15,593	0/0:24,0:24:60.13:0,60,3330	1/1:3,17:20:21.07:1044,21,0	1/1:7,5:12:24.02:815,24,0	0/0:15,0:15:24.04:0,24,1168	0/0:11,0:11:11.89:0,12,440	0/0:18,0:18:15.89:0,16,596	0/0:15,0:15:32.88:0,33,1216	0/0:23,0:23:51.07:0,51,1961	0/0:18,0:18:21.04:0,21,1115	0/0:14,0:13:17.97:0,18,535	0/0:3,0:3:6.02:0,6,515	0/0:10,0:10:27.09:0,27,2082	0/0:27,0:27:63.16:0,63,4499	0/0:11,0:11:21.04:0,21,806	0/0:24,0:24:69.22:0,69,4301	0/0:16,0:15:27.04:0,27,1457	0/0:13,0:13:30.05:0,30,1633
chr10	80942937	.	TTTTCTC	T	668.79	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=7.122;DP=497;FS=3.690;HRun=0;HaplotypeScore=105.4930;InbreedingCoeff=0.4697;MQ=61.10;MQ0=31;MQRankSum=-3.220;QD=6.14;ReadPosRankSum=0.367;VQSLOD=1.8377;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:17:35.36:291,35,0	0/0:6,0:6:14.97:0,15,119	0/0:15,0:10:30:0,30,301	0/0:17,0:14:20.64:0,21,262	0/0:26,0:25:39.42:0,39,478	0/0:15,0:15:42.03:0,42,406	0/0:16,0:13:35.61:0,36,387	0/0:31,0:31:91.62:0,92,842	0/0:22,0:21:16.80:0,17,590	0/0:22,0:22:62.91:0,63,555	0/0:19,0:18:43.82:0,44,386	0/0:13,0:11:27.75:0,28,271	1/1:9,1:10:22.31:218,22,0	1/1:4,12:14:9.03:166,9,0	0/1:20,0:19:64.76:65,0,326	0/1:15,0:14:59.36:59,0,138	0/0:20,0:19:17.61:0,18,323	0/1:12,0:11:13.26:13,0,123	0/0:20,0:20:42.18:0,42,477	0/0:26,0:24:39.11:0,39,473	0/0:10,0:10:29.97:0,30,260	0/0:10,0:9:20.62:0,21,224	0/0:16,0:14:38.34:0,38,302	0/0:17,0:16:32.95:0,33,468	0/0:21,0:19:12.32:0,12,407	0/0:25,0:24:46.99:0,47,537	0/1:18,0:18:13.86:14,0,290	0/0:20,0:18:5.01:0,5,304
chr10	80942939	.	TTCTCTCTC	T	1229.06	PASS	AB=0.921;AC=28;AF=0.538;AN=52;BaseQRankSum=4.994;DP=506;FS=3.567;HRun=0;HaplotypeScore=122.6825;InbreedingCoeff=0.1943;MQ=59.16;MQ0=32;MQRankSum=-3.743;QD=3.63;ReadPosRankSum=0.233;VQSLOD=2.1484;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:18:3.01:35,3,0	1/1:6,0:6:3.01:41,3,0	./.	./.	0/1:22,5:26:6.02:132,0,6	0/0:17,0:17:12.04:0,12,231	0/0:13,0:13:12.02:0,12,189	1/1:31,0:31:0.47:1,0,0	0/1:19,0:19:0.91:1,0,288	0/0:22,0:22:2.80:0,3,13	0/0:20,0:19:6:0,6,56	0/0:15,0:12:6.02:0,6,208	0/1:12,0:12:1.30:1,0,74	0/1:16,0:14:3.96:4,0,21	0/1:18,1:19:28.33:92,0,28	1/1:8,7:15:9.16:273,9,0	0/1:20,1:20:50.63:106,0,51	0/1:8,4:11:8.70:144,0,9	1/1:19,0:18:2.94:18,3,0	1/1:24,0:23:3.01:56,3,0	1/1:11,0:11:0.47:1,0,0	0/0:9,0:8:6.01:0,6,83	0/0:18,0:16:6:0,6,88	0/0:18,0:16:12.02:0,12,317	1/1:20,0:20:6.01:112,6,0	0/1:22,0:22:30.24:46,0,30	1/1:15,0:18:9.03:168,9,0	1/1:19,1:18:6.02:148,6,0
chr10	80943318	.	C	CT	1674.47	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=6.098;DP=603;FS=1.169;HRun=4;HaplotypeScore=66.9103;InbreedingCoeff=0.8413;MQ=70.42;MQ0=3;MQRankSum=-5.653;QD=21.20;ReadPosRankSum=-1.716;VQSLOD=2.6859;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:18:15.02:542,15,0	0/0:8,0:8:21.06:0,21,238	0/0:39,0:17:26.41:0,26,228	0/1:27,0:19:9.51:10,0,200	0/0:35,0:35:99:0,99,1122	0/0:26,0:26:69.15:0,69,754	0/0:14,0:14:39.55:0,40,423	0/0:30,0:30:69.03:0,69,760	0/0:17,0:17:51.15:0,51,578	0/0:32,0:31:93.25:0,93,1040	0/0:21,0:21:57.15:0,57,637	0/0:16,0:16:48.12:0,48,535	1/1:2,15:17:48.16:657,48,0	1/1:3,14:16:45.15:612,45,0	0/0:21,0:21:63.18:0,63,714	0/0:18,0:18:54.15:0,54,612	0/0:16,0:16:36.10:0,36,408	0/0:10,0:10:24.07:0,24,271	0/0:22,0:22:63.17:0,63,704	0/0:33,0:33:81.18:0,81,889	0/0:6,0:6:18.05:0,18,204	0/0:21,0:21:57.15:0,57,636	0/0:21,0:21:54.15:0,54,612	0/0:18,0:18:54.14:0,54,603	0/0:27,0:27:81.22:0,81,909	0/0:26,0:26:66.18:0,66,740	0/0:36,0:36:99:0,99,1111	0/0:11,0:11:33.09:0,33,373
chr10	80943339	.	C	CTT	1501.33	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.652;DP=567;FS=1.304;HRun=8;HaplotypeScore=74.5626;InbreedingCoeff=0.9210;MQ=70.62;MQ0=2;MQRankSum=-7.263;QD=31.28;ReadPosRankSum=0.524;VQSLOD=3.8145;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,12:15:24.08:380,24,0	0/0:7,0:7:21.06:0,21,234	0/0:35,0:20:17.27:0,17,275	0/0:26,0:19:1.98:0,2,147	0/0:35,0:35:99:0,99,1078	0/0:25,0:24:75.20:0,75,835	0/0:11,0:11:24.06:0,24,265	0/0:26,0:26:41.11:0,41,532	0/0:17,0:17:48.13:0,48,535	0/0:28,0:28:66.15:0,66,734	0/0:23,0:23:63.17:0,63,700	0/0:17,0:17:45.10:0,45,493	1/1:2,16:18:45.14:692,45,0	1/1:3,12:14:36.12:571,36,0	0/0:22,0:22:57.14:0,57,635	0/0:15,0:15:33.07:0,33,368	0/0:19,0:19:57.15:0,57,635	0/0:8,0:8:18.05:0,18,201	0/0:16,0:16:39.09:0,39,434	0/0:28,0:28:78.21:0,78,869	0/0:8,0:8:21.03:0,21,216	0/0:21,0:21:57.13:0,57,625	0/0:19,0:19:39.08:0,39,435	0/0:18,0:18:48.12:0,48,535	0/0:27,0:27:69.16:0,69,760	0/0:23,0:23:60.16:0,60,669	0/0:35,0:35:96.25:0,96,1070	0/0:8,0:8:24.06:0,24,268
chr10	80944740	.	G	GT	906.42	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=4.381;DP=455;FS=1.391;HRun=9;HaplotypeScore=83.7336;InbreedingCoeff=0.8346;MQ=80.51;MQ0=1;MQRankSum=-1.912;QD=19.29;ReadPosRankSum=-2.177;VQSLOD=3.0913;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:10:24.03:252,24,0	0/0:7,0:7:21:0,21,182	0/0:25,0:19:20.24:0,20,204	0/1:8,0:8:12.18:12,0,18	0/0:22,0:22:56.97:0,57,490	0/0:18,0:18:50.99:0,51,443	0/0:8,0:8:23.95:0,24,201	0/0:34,0:34:65.62:0,66,536	0/0:7,0:7:20.99:0,21,180	0/0:25,0:25:74.95:0,75,645	0/0:20,0:20:59.99:0,60,521	0/0:14,0:14:41.98:0,42,361	1/1:6,7:13:30:295,30,0	1/1:3,13:16:45.12:494,45,0	0/0:18,0:18:48.45:0,48,414	0/0:11,0:11:26.96:0,27,227	0/0:12,0:12:29.90:0,30,247	0/0:10,0:10:14.65:0,15,111	0/0:14,0:15:38.40:0,38,301	0/0:20,0:20:51.44:0,51,439	0/0:9,0:9:20.74:0,21,168	0/0:12,0:12:26.97:0,27,234	0/0:20,0:20:53.99:0,54,469	0/0:13,0:13:35.93:0,36,298	0/0:21,0:21:56.31:0,56,473	0/0:20,0:20:56.18:0,56,471	0/0:35,0:35:77.01:0,77,632	0/0:12,0:12:20.96:0,21,176
chr10	80944795	.	TA	T	6913.67	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=8.967;DP=441;FS=0.465;HRun=10;HaplotypeScore=57.7338;InbreedingCoeff=0.9322;MQ=77.72;MQ0=1;MQRankSum=-0.533;QD=20.27;ReadPosRankSum=1.102;VQSLOD=5.6414;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,6:10:23.95:199,24,0	1/1:1,7:8:20.98:182,21,0	0/0:15,0:13:8.11:0,8,62	0/0:9,0:9:8.94:0,9,64	1/1:4,18:22:47.72:402,48,0	1/1:2,21:22:56.98:495,57,0	1/1:1,9:10:23.99:208,24,0	1/1:6,24:30:68.88:581,69,0	0/0:8,0:8:24.06:0,24,266	1/1:7,19:26:50.97:442,51,0	1/1:3,14:17:38.97:339,39,0	0/0:16,0:16:42.11:0,42,464	1/1:2,13:15:44.99:390,45,0	1/1:1,12:13:35.74:298,36,0	1/1:2,14:16:35.99:313,36,0	1/1:1,11:12:26.99:234,27,0	1/1:1,12:13:29.99:260,30,0	1/1:1,8:9:21:182,21,0	1/1:1,15:16:5.79:279,6,0	1/1:2,16:18:47.99:417,48,0	1/1:1,3:4:6:52,6,0	0/0:14,0:14:39.11:0,39,431	0/0:20,0:20:54.15:0,54,597	0/0:17,0:17:50.97:0,51,545	1/1:2,16:18:44.99:391,45,0	1/1:1,21:22:62.99:547,63,0	1/1:6,28:34:65.98:573,66,0	1/1:0,5:5:15:130,15,0
chr10	80945159	.	ACACT	A	2877.02	PASS	AB=0.724;AC=5;AF=0.089;AN=56;BaseQRankSum=11.068;DP=701;FS=4.563;HRun=0;HaplotypeScore=111.6666;InbreedingCoeff=0.7790;MQ=68.80;MQ0=1;MQRankSum=-2.282;QD=36.42;ReadPosRankSum=2.845;VQSLOD=3.4571;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,8:21:19.89:383,0,20	0/0:9,0:9:27.08:0,27,673	0/0:32,0:24:38.87:0,39,1057	0/0:20,0:14:31.85:0,32,550	0/0:30,0:30:90.21:0,90,2063	0/0:26,0:26:72.19:0,72,1713	0/0:17,0:17:51.11:0,51,1066	0/0:41,0:41:99:0,117,2613	0/0:25,0:25:69.20:0,69,1692	0/0:26,0:26:78.24:0,78,1792	0/0:32,0:32:93.23:0,93,2161	0/0:28,0:28:81.25:0,81,1967	1/1:3,32:35:81.27:1483,81,0	1/1:2,21:23:63.21:1141,63,0	0/0:25,0:25:75.18:0,75,1688	0/0:39,0:39:99:0,114,2752	0/0:23,0:23:66.16:0,66,1485	0/0:14,0:14:38.99:0,39,753	0/0:22,0:22:60.17:0,60,1397	0/0:36,0:36:99:0,105,2467	0/0:29,0:29:84.27:0,84,2181	0/0:29,0:29:84.27:0,84,2185	0/0:24,0:24:72.23:0,72,1849	0/0:11,0:11:24.06:0,24,590	0/0:23,0:23:69.19:0,69,1578	0/0:23,0:23:69.22:0,69,1727	0/0:31,0:31:91.04:0,91,1795	0/0:7,0:7:18.02:0,18,369
chr10	80945760	.	CT	C	13819.75	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=15.393;DP=627;FS=1.310;HRun=2;HaplotypeScore=60.9074;InbreedingCoeff=0.9988;MQ=80.30;MQ0=0;MQRankSum=-3.455;QD=36.46;ReadPosRankSum=2.120;VQSLOD=5.4798;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.27:0,81,1211	1/1:1,11:12:33.11:428,33,0	0/0:17,0:17:51.17:0,51,764	0/0:15,0:15:33.42:0,33,505	1/1:0,35:35:99:1324,102,0	0/0:28,0:28:84.28:0,84,1238	0/0:13,0:13:39.12:0,39,564	1/1:0,29:29:87.27:1115,87,0	0/0:20,0:20:57.19:0,57,845	1/1:0,33:33:99:1285,99,0	1/1:0,27:27:69.22:896,69,0	0/0:18,0:18:51.17:0,51,765	0/0:19,0:19:57.19:0,57,854	0/0:15,0:15:45.15:0,45,675	1/1:0,29:29:78.25:1013,78,0	1/1:2,22:24:18.23:723,18,0	1/1:0,16:16:45.15:584,45,0	1/1:0,18:18:51.17:662,51,0	1/1:0,19:19:57.19:740,57,0	1/1:1,33:34:99:1286,99,0	1/1:0,20:20:54.18:701,54,0	0/0:27,0:27:81.26:0,81,1191	0/0:23,0:23:69.22:0,69,1009	0/0:25,0:25:72.24:0,72,1076	1/1:0,16:16:48.16:623,48,0	1/1:1,29:30:87.27:1114,87,0	1/1:0,26:26:69.22:896,69,0	1/1:0,11:11:33.11:428,33,0
chr10	80947164	.	GTT	G	8837.11	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=0.846;DP=664;FS=2.947;HRun=13;HaplotypeScore=98.3242;InbreedingCoeff=0.9197;MQ=67.09;MQ0=0;MQRankSum=0.694;QD=20.46;ReadPosRankSum=2.342;VQSLOD=4.6074;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:46.98:0,47,422	1/1:2,18:20:45.04:436,45,0	0/0:27,1:17:6.78:0,7,248	0/1:17,0:14:3.57:4,0,139	1/1:9,31:42:79.93:771,80,0	1/1:8,24:33:53.93:573,54,0	1/1:4,5:9:14.99:145,15,0	1/1:7,24:31:68.96:654,69,0	0/0:24,0:24:57.18:0,57,806	1/1:7,27:34:78.03:756,78,0	1/1:3,28:32:65.91:690,66,0	0/0:22,0:22:54.09:0,54,716	0/0:28,0:28:38.65:0,39,364	0/0:26,0:26:62.94:0,63,537	1/1:2,21:23:60.08:582,60,0	1/1:3,23:26:60.07:582,60,0	1/1:4,14:19:35.78:332,36,0	1/1:4,21:25:54.01:524,54,0	1/1:4,9:12:30.03:289,30,0	1/1:3,23:27:62.76:592,63,0	1/1:4,3:7:8.97:87,9,0	0/0:24,0:24:69.23:0,69,999	0/0:26,0:27:74.74:0,75,1049	0/0:20,0:20:47.64:0,48,646	1/1:3,16:19:45.04:436,45,0	1/1:2,20:23:54.02:573,54,0	1/1:1,21:22:57.09:553,57,0	1/1:1,9:10:27.03:259,27,0
chr10	80947522	.	AT	A	10371.55	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=14.407;DP=500;FS=1.551;HRun=4;HaplotypeScore=65.0903;InbreedingCoeff=0.9281;MQ=79.07;MQ0=0;MQRankSum=-2.686;QD=32.11;ReadPosRankSum=0.656;VQSLOD=5.3406;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.18:0,66,882	1/1:0,13:13:39.12:468,39,0	0/0:13,0:13:23.76:0,24,363	0/1:10,0:10:3.86:4,0,231	1/1:3,21:24:54.16:648,54,0	0/0:22,0:22:66.22:0,66,924	0/0:16,0:16:45.15:0,45,630	1/1:1,19:20:57.16:672,57,0	0/0:13,0:13:36.11:0,36,487	1/1:0,29:29:84.24:995,84,0	1/1:1,23:24:66.20:792,66,0	0/0:17,0:17:48.16:0,48,662	0/0:25,0:25:75.24:0,75,1033	0/0:12,0:12:36.12:0,36,504	1/1:0,17:17:45.14:540,45,0	1/1:0,15:15:45.14:540,45,0	1/1:0,12:12:33.10:396,33,0	1/1:0,17:17:51.16:612,51,0	1/1:0,20:20:60.17:708,60,0	1/1:0,25:25:75.23:900,75,0	1/1:0,4:4:12.04:144,12,0	0/0:15,0:15:45.15:0,45,630	0/0:14,0:14:42.13:0,42,573	0/0:7,0:7:21.07:0,21,293	1/1:0,24:24:69.21:828,69,0	1/1:1,30:31:90.28:1080,90,0	1/1:1,29:30:81.25:972,81,0	1/1:4,4:8:6.02:72,6,0
chr10	80952429	.	A	AG	17459.24	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-12.128;DP=568;FS=1.222;HRun=0;HaplotypeScore=48.6160;InbreedingCoeff=0.9932;MQ=70.32;MQ0=0;MQRankSum=-1.045;QD=39.68;ReadPosRankSum=0.849;VQSLOD=4.9474;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:90.31:1377,90,0	1/1:0,14:14:33.03:473,33,0	0/0:6,0:6:12.04:0,12,167	0/0:9,0:9:17.57:0,18,169	1/1:0,24:24:63.04:902,63,0	0/0:20,0:20:60.16:0,60,785	1/1:0,18:18:39.13:596,39,0	1/1:0,22:22:66.06:931,66,0	0/0:15,0:15:45.15:0,45,628	1/1:0,17:17:51.16:752,51,0	1/1:0,12:12:36.12:548,36,0	0/0:19,0:19:57.08:0,57,747	1/1:0,24:24:66.21:1009,66,0	1/1:3,14:17:36.12:550,36,0	1/1:1,33:34:93.32:1423,93,0	1/1:0,24:24:60.20:918,60,0	1/1:0,22:22:66.22:1010,66,0	1/1:1,13:14:33.11:504,33,0	1/1:1,23:24:70.10:1037,70,0	1/1:1,35:36:99:1501,102,0	1/1:2,25:27:60.20:918,60,0	0/0:21,0:21:63.12:0,63,810	0/0:17,0:17:48.14:0,48,650	0/0:21,0:21:63.19:0,63,861	1/1:0,24:24:63.21:960,63,0	1/1:2,13:15:41.78:580,42,0	1/1:0,20:20:50.91:780,51,0	1/1:0,15:15:45.15:688,45,0
chr10	80952679	.	T	TACAC	9841.81	PASS	AB=0.775;AC=36;AF=0.643;AN=56;BaseQRankSum=2.974;DP=828;FS=10.405;HRun=0;HaplotypeScore=169.4492;InbreedingCoeff=0.4871;MQ=61.99;MQ0=15;MQRankSum=0.500;QD=15.47;ReadPosRankSum=-2.014;VQSLOD=3.6912;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:39:30:184,30,0	1/1:0,2:3:6.02:144,6,0	0/0:41,0:16:5.99:0,6,64	0/1:53,0:18:23.72:24,0,120	1/1:6,14:25:15.05:352,15,0	0/0:20,0:20:31.02:0,31,515	0/1:16,0:31:24.20:73,0,24	0/1:35,1:35:12.09:448,0,12	0/0:21,0:23:11.14:0,11,470	1/1:16,17:32:57.20:1290,57,0	1/1:7,12:21:27.09:647,27,0	0/0:28,0:29:35.22:0,35,982	1/1:14,0:31:12.85:108,13,0	0/1:16,0:35:82.60:83,0,112	1/1:13,17:31:29.94:721,30,0	1/1:13,19:36:41.34:789,41,0	1/1:16,11:35:46.88:915,47,0	1/1:9,10:21:18.78:315,19,0	1/1:15,0:15:11.83:226,12,0	0/1:18,12:30:16.55:613,0,17	1/1:28,21:57:29.51:661,30,0	0/0:18,0:18:39.13:0,39,601	0/0:26,0:28:33.88:0,34,765	0/0:33,0:33:52.06:0,52,844	1/1:12,13:27:29.62:602,30,0	1/1:19,16:39:30.78:1022,31,0	0/1:8,8:17:27.15:359,0,27	1/1:8,5:14:12.04:266,12,0
chr10	80954520	.	CAT	C	371.04	PASS	AB=0.943;AC=7;AF=0.125;AN=56;BaseQRankSum=5.004;DP=1144;FS=0.648;HRun=0;HaplotypeScore=194.6918;InbreedingCoeff=0.7545;MQ=49.26;MQ0=60;MQRankSum=-0.057;QD=3.04;ReadPosRankSum=-4.713;VQSLOD=1.6078;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,2:32:1.86:58,0,2	0/0:14,0:14:7.07:0,7,517	0/0:32,0:1:3.01:0,3,41	0/0:35,0:3:2.17:0,2,51	0/0:29,0:28:81.22:0,81,1440	0/0:16,0:15:38.66:0,39,735	1/1:21,5:23:9.75:128,10,0	0/0:67,0:39:84.48:0,84,1242	0/0:52,0:50:99:0,120,2089	0/0:53,0:51:99:0,148,2372	0/0:29,0:28:71.63:0,72,1224	0/0:41,0:39:99:0,105,1890	1/1:23,6:29:11.08:152,11,0	1/1:28,6:33:13.41:169,13,0	0/0:56,0:55:99:0,139,2333	0/0:57,0:53:99:0,129,2152	0/0:41,0:41:99:0,103,1583	0/0:33,1:34:32.91:0,33,1292	0/0:35,0:24:59.90:0,60,916	0/0:32,0:32:90.22:0,90,1567	0/0:124,1:119:99:0,155,2622	0/0:38,0:38:98.12:0,98,1760	0/0:30,0:31:86.72:0,87,1370	0/0:66,0:66:99:0,159,2699	0/0:31,1:32:77.69:0,78,1309	0/0:60,0:53:99:0,110,2120	0/0:30,0:30:71.92:0,72,1219	0/0:15,0:15:33:0,33,557
chr10	80954530	.	CAT	C	1380.39	PASS	AB=0.571;AC=7;AF=0.125;AN=56;BaseQRankSum=3.424;DP=1135;FS=34.100;HRun=0;HaplotypeScore=199.7813;InbreedingCoeff=0.8413;MQ=49.71;MQ0=58;MQRankSum=-0.857;QD=11.60;ReadPosRankSum=-1.937;VQSLOD=1.4647;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,15:29:36.05:506,36,0	0/0:14,0:14:11.01:0,11,575	0/0:37,0:1:3.01:0,3,47	0/0:41,0:4:8.70:0,9,93	0/0:33,0:32:92.53:0,93,1578	0/0:21,0:20:56.59:0,57,909	1/1:13,7:20:27:317,27,0	0/0:62,0:29:42.64:0,43,976	0/0:57,0:54:99:0,126,2163	0/0:54,0:51:99:0,141,2330	0/0:29,0:27:68.75:0,69,1234	0/0:41,0:39:98.75:0,99,1736	0/1:9,27:36:0.92:318,0,1	1/1:26,6:31:25.06:388,25,0	0/0:52,0:51:99:0,117,2281	0/0:58,0:53:99:0,129,2304	0/0:34,0:34:87.73:0,88,1589	0/0:34,0:35:53.39:0,53,1299	0/0:31,0:23:32.93:0,33,708	0/0:34,0:34:92.24:0,92,1568	0/0:118,0:115:99:0,155,2617	0/0:39,0:39:99:0,100,1842	0/0:28,0:28:72.19:0,72,1339	0/0:63,0:63:99:0,153,2600	0/0:35,0:35:63.87:0,64,1314	0/0:59,0:52:99:0,117,2215	0/0:28,0:28:71.99:0,72,1251	0/0:13,0:13:33.07:0,33,556
chr10	80954545	.	TCA	T	13913.45	PASS	AB=0.958;AC=32;AF=0.571;AN=56;BaseQRankSum=7.471;DP=1090;FS=20.218;HRun=0;HaplotypeScore=153.0358;InbreedingCoeff=0.8317;MQ=50.20;MQ0=58;MQRankSum=-0.683;QD=21.15;ReadPosRankSum=3.176;VQSLOD=3.5237;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:44.85:0,45,717	1/1:5,7:12:24.96:310,25,0	0/0:49,0:3:8.24:0,8,109	0/0:45,0:3:5.81:0,6,63	1/1:13,22:33:79.95:1024,80,0	0/0:25,0:24:57.18:0,57,908	0/0:22,0:21:39.08:0,39,644	0/1:44,3:24:55.86:272,0,56	0/0:56,0:54:99:0,120,1965	1/1:23,18:38:84.27:1076,84,0	1/1:5,18:22:48.16:618,48,0	0/0:36,0:34:87.75:0,88,1389	0/1:39,1:40:12.82:13,0,498	0/0:34,0:33:31.20:0,31,737	1/1:18,31:48:99:1562,123,0	1/1:13,45:53:99:1375,108,0	1/1:12,20:32:74.90:924,75,0	1/1:6,28:34:47.44:786,47,0	1/1:19,4:15:24.08:304,24,0	1/1:9,19:28:73.77:911,74,0	1/1:34,79:110:99:1602,126,0	0/0:39,0:39:64.03:0,64,1615	0/0:32,0:32:90.12:0,90,1352	0/0:59,0:59:99:0,129,2128	1/1:4,28:32:49.62:829,50,0	1/1:25,25:47:50.87:1189,51,0	1/1:3,25:28:63.20:810,63,0	1/1:3,10:13:24.07:309,24,0
chr10	80954655	.	TCA	T	14698.79	PASS	AB=0.868;AC=32;AF=0.571;AN=56;BaseQRankSum=9.935;DP=1035;FS=5.508;HRun=0;HaplotypeScore=210.6452;InbreedingCoeff=0.9128;MQ=55.38;MQ0=24;MQRankSum=1.418;QD=23.15;ReadPosRankSum=3.769;VQSLOD=4.4755;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:53.86:0,54,893	1/1:1,11:12:32.94:400,33,0	0/0:48,0:10:23.76:0,24,293	0/1:58,0:25:1.77:2,0,569	1/1:4,29:33:84.27:1077,84,0	0/0:29,0:28:66.21:0,66,1073	0/0:20,0:20:42.11:0,42,640	1/1:29,15:32:20.22:440,20,0	0/0:45,0:45:99:0,108,1778	1/1:4,35:39:99:1322,105,0	1/1:9,17:26:57.17:718,57,0	0/0:44,0:44:91.24:0,91,1671	0/0:43,0:43:99:0,99,1608	0/0:46,0:46:69.15:0,69,1414	1/1:8,44:51:99:1233,99,0	1/1:20,29:48:61.39:1321,61,0	1/1:4,29:33:53.25:742,53,0	1/1:12,12:24:60.05:689,60,0	0/1:16,9:16:1.15:312,0,1	1/1:3,31:34:72.19:905,72,0	1/1:37,44:80:99:2089,168,0	0/0:28,0:28:69.20:0,69,1086	0/0:28,0:28:60.07:0,60,991	0/0:38,0:38:98.63:0,99,1601	1/1:7,21:28:63.07:745,63,0	1/1:6,43:49:99:1595,126,0	1/1:9,29:40:69.69:878,70,0	1/1:1,7:8:18.06:231,18,0
chr10	80954666	.	CAT	C	5049.47	PASS	AB=0.986;AC=22;AF=0.393;AN=56;BaseQRankSum=16.507;DP=1043;FS=7.644;HRun=0;HaplotypeScore=250.5543;InbreedingCoeff=0.2700;MQ=54.82;MQ0=24;MQRankSum=2.557;QD=8.18;ReadPosRankSum=8.396;VQSLOD=2.6376;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:48.82:0,49,863	0/1:14,0:14:4.19:142,0,4	0/0:36,0:9:16.63:0,17,257	0/0:50,0:23:35.08:0,35,732	0/1:38,0:38:17.73:362,0,18	0/0:25,0:25:55.20:0,55,1153	0/0:21,0:21:39.02:0,39,568	0/1:51,0:34:99:140,0,167	0/0:40,0:40:99:0,114,1873	0/1:46,0:46:99:424,0,120	1/1:25,1:26:25.18:238,25,0	0/0:42,0:42:99:0,118,1792	0/0:43,0:43:99:0,99,1338	0/0:42,0:42:76.01:0,76,1217	1/1:54,0:53:16.41:466,16,0	0/1:49,0:48:55.87:428,0,56	1/1:34,1:35:39.76:349,40,0	0/1:21,2:23:23.29:274,0,23	0/1:24,0:17:42.05:86,0,42	0/1:39,0:39:65.98:277,0,66	1/1:85,0:84:20.56:644,21,0	0/0:26,0:26:71.06:0,71,1191	0/0:26,0:26:50.12:0,50,1025	0/0:43,0:43:99:0,114,1737	1/1:27,0:27:18.61:253,19,0	0/1:55,2:57:46.19:527,0,46	0/1:40,1:42:42.23:342,0,42	1/1:7,0:7:17.47:99,17,0
chr10	80954680	.	TACACAC	T	2584.43	PASS	AB=0.824;AC=7;AF=0.125;AN=56;BaseQRankSum=2.363;DP=976;FS=1.158;HRun=0;HaplotypeScore=297.2729;InbreedingCoeff=0.8311;MQ=53.57;MQ0=21;MQRankSum=-10.587;QD=20.51;ReadPosRankSum=-1.335;VQSLOD=2.3128;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,6:27:79.22:314,0,79	0/0:14,0:14:30.10:0,30,949	0/0:32,0:10:18.06:0,18,481	0/0:50,0:23:30.45:0,30,501	0/0:42,0:43:90.29:0,90,2555	0/0:27,0:27:54.08:0,54,1470	1/1:7,13:20:24.08:416,24,0	0/0:48,0:37:71.93:0,72,1872	0/0:37,0:38:72.25:0,72,2185	0/0:45,0:45:99:0,108,3329	0/0:24,0:24:52.80:0,53,1588	0/0:39,0:39:96.29:0,96,2914	1/1:12,27:39:51.17:988,51,0	1/1:14,25:39:51.17:1015,51,0	0/0:50,0:50:99:0,100,3066	0/0:44,0:43:90.30:0,90,2671	0/0:33,0:33:69.43:0,69,1932	0/0:23,0:21:42.14:0,42,1277	0/0:20,0:14:27.09:0,27,736	0/0:35,0:35:90.31:0,90,2908	0/0:75,0:75:99:0,121,3614	0/0:25,0:27:75.26:0,75,2360	0/0:21,0:24:50.76:0,51,1437	0/0:35,0:37:87.30:0,87,2660	0/0:25,0:26:46.94:0,47,1600	0/0:49,0:49:99:0,105,3350	0/0:34,0:35:81.28:0,81,2481	0/0:6,0:7:18.06:0,18,485
chr10	80955722	.	A	AT	9637.81	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-1.879;DP=533;FS=4.101;HRun=8;HaplotypeScore=70.3176;InbreedingCoeff=0.9940;MQ=77.20;MQ0=1;MQRankSum=-2.017;QD=24.52;ReadPosRankSum=2.533;VQSLOD=5.8551;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:22:54.25:287,54,0	1/1:2,10:12:27.08:312,27,0	0/0:17,0:16:21.35:0,21,284	0/0:17,0:16:22.14:0,22,191	1/1:2,16:18:51.13:576,51,0	0/0:24,0:24:66.01:0,66,599	1/1:4,14:18:39.12:450,39,0	1/1:5,15:20:45.08:478,45,0	0/0:15,0:15:39:0,39,352	1/1:3,26:29:72.19:819,72,0	1/1:3,20:23:57.04:625,57,0	0/0:17,0:17:45.01:0,45,411	1/1:0,0:12:25.57:130,26,0	1/1:4,1:25:48.13:242,48,0	1/1:3,14:17:39.12:450,39,0	1/1:3,13:16:33.10:381,33,0	1/1:3,27:30:69.21:796,69,0	1/1:2,18:20:20.69:492,21,0	1/1:4,7:11:21.06:242,21,0	1/1:1,24:25:68.50:749,68,0	1/1:1,10:11:27.08:312,27,0	0/0:14,0:14:38.98:0,39,346	0/0:23,0:23:66.04:0,66,604	0/0:13,0:13:38.99:0,39,347	1/1:1,21:22:60.18:692,60,0	1/1:3,19:23:53.20:642,53,0	1/1:4,24:29:72.05:811,72,0	1/1:4,4:9:14.88:153,15,0
chr10	80956902	.	CTT	C	952.26	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.160;DP=509;FS=0.000;HRun=2;HaplotypeScore=70.8681;InbreedingCoeff=0.9647;MQ=86.73;MQ0=0;MQRankSum=-7.578;QD=32.84;ReadPosRankSum=2.573;VQSLOD=3.6656;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:9.03:140,9,0	0/0:4,0:4:12.04:0,12,244	0/0:20,0:20:60.19:0,60,1134	0/0:16,0:16:44.78:0,45,877	0/0:19,0:19:54.18:0,54,1054	0/0:39,0:39:99:0,117,2322	0/0:15,0:15:45.15:0,45,914	0/0:25,0:25:75.25:0,75,1492	0/0:15,0:15:45.15:0,45,868	0/0:27,0:27:81.26:0,81,1537	0/0:29,0:29:87.26:0,87,1727	0/0:19,0:19:57.18:0,57,1105	1/1:3,13:17:47.88:672,48,0	1/1:0,7:7:18.06:276,18,0	0/0:17,0:17:51.18:0,51,1036	0/0:11,0:11:33.11:0,33,671	0/0:15,0:15:42.10:0,42,766	0/0:16,0:16:48.16:0,48,925	0/0:20,0:20:57.19:0,57,1124	0/0:27,0:27:81.23:0,81,1597	0/0:11,0:11:33.11:0,33,671	0/0:13,0:13:39.13:0,39,785	0/0:21,0:21:63.22:0,63,1270	0/0:11,0:11:33.09:0,33,599	0/0:18,0:18:54.19:0,54,1087	0/0:29,0:29:87.30:0,87,1761	0/0:27,0:27:81.28:0,81,1643	0/0:16,0:16:48.12:0,48,900
chr10	80956907	.	CT	C	584.78	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.104;DP=510;FS=0.000;HRun=1;HaplotypeScore=61.7440;InbreedingCoeff=0.9648;MQ=86.08;MQ0=0;MQRankSum=-7.977;QD=21.66;ReadPosRankSum=3.476;VQSLOD=3.7666;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:9.02:96,9,0	0/0:4,0:4:12.04:0,12,192	0/0:18,0:18:54.16:0,54,831	0/0:17,0:17:45.03:0,45,707	0/0:19,0:19:54.17:0,54,840	0/0:38,0:38:99:0,114,1795	0/0:15,0:15:45.14:0,45,695	0/0:26,0:26:78.26:0,78,1225	0/0:14,0:14:39.12:0,39,601	0/0:23,0:23:69.23:0,69,1084	0/0:30,0:30:90.31:0,90,1437	0/0:17,0:17:51.17:0,51,795	1/1:2,13:15:42.06:433,42,0	1/1:0,7:7:18.04:192,18,0	0/0:19,0:19:54.17:0,54,840	0/0:14,0:14:42.12:0,42,625	0/0:14,0:14:39.13:0,39,623	0/0:16,0:16:48.16:0,48,767	0/0:20,0:20:57.19:0,57,911	0/0:27,0:27:81.28:0,81,1295	0/0:12,0:12:36.12:0,36,576	0/0:13,0:13:39.13:0,39,624	0/0:23,0:23:69.22:0,69,1076	0/0:11,0:11:33.11:0,33,527	0/0:18,0:18:54.17:0,54,840	0/0:30,0:30:90.31:0,90,1440	0/0:31,0:31:93.30:0,93,1459	0/0:14,0:14:42.14:0,42,671
chr10	80957302	.	TAGACAGAC	T	8035.48	PASS	AB=0.961;AC=31;AF=0.574;AN=54;BaseQRankSum=4.346;DP=507;FS=3.171;HRun=0;HaplotypeScore=190.4063;InbreedingCoeff=0.3870;MQ=50.83;MQ0=3;MQRankSum=-2.437;QD=20.39;ReadPosRankSum=-7.477;VQSLOD=1.2909;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:30:99:311,0,625	1/1:4,0:4:6.02:127,6,0	0/0:2,0:1:3.01:0,3,42	./.	1/1:27,7:34:43.85:728,44,0	0/0:21,0:21:53.83:0,54,1241	1/1:11,0:11:14.04:248,14,0	1/1:19,0:43:44.70:730,45,0	0/0:17,0:17:45.14:0,45,925	1/1:19,8:27:69.21:1327,69,0	1/1:22,3:25:32.71:552,33,0	0/0:18,0:18:42.14:0,42,1070	0/1:25,0:25:99:307,0,613	0/1:17,0:17:57.91:58,0,711	1/1:18,2:20:34.88:574,35,0	1/1:2,12:14:6.02:131,6,0	1/1:12,2:15:24.07:344,24,0	0/1:11,0:11:21.92:216,0,22	1/1:13,0:13:15.66:201,16,0	0/1:17,0:19:16.01:287,0,16	0/1:14,0:14:17.94:44,0,18	0/0:7,0:7:18.06:0,18,526	0/0:19,0:18:51.17:0,51,1125	0/0:15,0:16:38.78:0,39,1090	1/1:16,1:17:36.10:609,36,0	1/1:23,1:24:57.13:907,57,0	0/1:22,0:28:31.70:335,0,32	0/0:1,0:13:3.56:0,4,13
chr10	80957403	.	TAGACAG	T	6130.34	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=12.878;DP=587;FS=0.000;HRun=0;HaplotypeScore=142.9107;InbreedingCoeff=0.9074;MQ=68.68;MQ0=5;MQRankSum=-7.659;QD=17.67;ReadPosRankSum=-5.535;VQSLOD=2.7550;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:33.07:0,33,943	1/1:0,3:3:6.02:114,6,0	0/0:25,0:15:12.03:0,12,251	0/0:24,0:17:9.50:0,9,164	1/1:14,24:38:47.43:495,47,0	0/0:15,0:15:30.10:0,30,886	0/0:10,0:10:27.07:0,27,664	1/1:31,14:45:42.11:684,42,0	0/0:25,0:25:51.16:0,51,1486	1/1:16,15:30:45.14:861,45,0	1/1:17,18:35:41.60:393,42,0	0/0:16,0:16:36.12:0,36,1126	0/0:26,0:26:51.15:0,51,1526	0/0:24,0:24:45.14:0,45,1330	1/1:5,9:14:9.03:113,9,0	1/1:8,12:20:27.06:516,27,0	1/1:4,3:7:5.55:79,6,0	1/1:9,0:9:3.01:44,3,0	1/1:9,8:16:24.08:458,24,0	1/1:14,28:42:74.28:821,74,0	1/1:14,0:14:5.98:69,6,0	0/0:18,0:18:42.12:0,42,1185	0/0:22,0:22:42.14:0,42,1232	0/0:13,0:13:19.50:0,19,633	1/1:8,18:26:29.71:279,30,0	1/1:6,10:16:24.01:387,24,0	1/1:6,17:23:35.92:549,36,0	1/1:3,4:7:15.01:267,15,0
chr10	80957793	.	AT	A	9202.38	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=10.920;DP=680;FS=0.702;HRun=10;HaplotypeScore=78.6860;InbreedingCoeff=0.9974;MQ=80.04;MQ0=0;MQRankSum=-1.749;QD=18.33;ReadPosRankSum=1.538;VQSLOD=5.5453;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:25:40.74:120,41,0	1/1:1,8:9:20.99:182,21,0	0/0:15,0:15:29.63:0,30,286	0/0:20,0:21:27.51:0,28,367	1/1:5,36:41:89.94:781,90,0	0/0:30,0:30:62.35:0,62,874	1/1:5,0:23:32.58:96,33,0	1/1:11,32:43:86.92:749,87,0	0/0:23,0:23:69.18:0,69,756	1/1:5,36:41:80.73:917,81,0	1/1:5,29:34:83.96:729,84,0	0/0:24,0:24:66.15:0,66,707	1/1:0,0:14:28.52:84,29,0	1/1:1,0:16:24.44:72,24,0	1/1:2,36:38:65.88:800,66,0	1/1:1,13:14:35.99:313,36,0	1/1:3,21:24:26.81:462,27,0	1/1:1,10:11:26.99:234,27,0	1/1:4,17:21:20.80:409,21,0	1/1:6,34:40:98.95:859,99,0	1/1:2,16:18:41.98:365,42,0	0/0:32,0:32:78.21:0,78,863	0/0:20,1:21:34.11:0,34,604	0/0:11,0:11:33.08:0,33,357	1/1:4,16:20:44.98:391,45,0	1/1:3,25:28:71.97:625,72,0	1/1:2,24:26:68.98:599,69,0	1/1:0,16:16:47.99:417,48,0
chr10	80958208	.	T	TAAAA	12998.05	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=7.148;DP=478;FS=6.321;HRun=8;HaplotypeScore=99.6950;InbreedingCoeff=0.9117;MQ=76.00;MQ0=0;MQRankSum=-7.546;QD=39.39;ReadPosRankSum=0.638;VQSLOD=3.2987;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:43.07:43,0,378	1/1:0,6:6:18.01:387,18,0	0/0:12,0:12:14.71:0,15,255	0/0:17,0:15:27.02:0,27,368	1/1:5,22:29:75.21:1647,75,0	0/0:22,0:22:57.16:0,57,842	0/0:8,0:8:21.02:0,21,274	1/1:6,0:30:75.11:912,75,0	0/0:16,0:16:42.11:0,42,636	1/1:4,14:19:42.14:919,42,0	1/1:7,31:39:90.18:1875,90,0	0/0:15,0:15:39.08:0,39,547	0/0:18,0:18:54.18:0,54,817	0/0:8,0:8:21.05:0,21,296	1/1:6,14:23:39.13:872,39,0	1/1:1,9:10:24.08:589,24,0	1/1:2,11:14:33.11:773,33,0	1/1:2,8:14:30.10:668,30,0	1/1:2,0:10:29.99:334,30,0	1/1:1,1:33:84.13:1074,84,0	1/1:0,0:6:12.04:150,12,0	0/0:9,0:9:24.08:0,24,363	0/0:18,0:18:51.15:0,51,772	0/0:5,0:5:12.03:0,12,182	1/1:4,14:18:36.12:883,36,0	1/1:5,3:27:59.97:768,60,0	1/1:5,0:27:60.19:767,60,0	1/1:2,0:14:27.08:337,27,0
chr10	80959151	.	AT	A	8906.54	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=15.431;DP=636;FS=1.771;HRun=8;HaplotypeScore=84.9407;InbreedingCoeff=0.9361;MQ=71.68;MQ0=0;MQRankSum=-2.005;QD=22.90;ReadPosRankSum=1.386;VQSLOD=5.3812;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.21:0,78,919	1/1:1,5:6:12.02:116,12,0	0/0:12,0:12:32.87:0,33,328	0/1:14,0:14:5.84:6,0,199	1/1:4,24:28:69.11:666,69,0	0/0:18,0:18:51.16:0,51,616	0/0:17,0:17:48.14:0,48,567	1/1:4,26:30:78.11:747,78,0	0/0:31,0:31:87.24:0,87,1028	1/1:5,21:26:63.10:608,63,0	1/1:3,21:24:63:589,63,0	0/0:27,0:27:72.18:0,72,843	0/0:21,0:21:60.18:0,60,723	0/0:24,0:24:63.16:0,63,736	1/1:5,19:24:54.08:522,54,0	1/1:1,18:19:45.07:435,45,0	1/1:1,25:26:69.11:666,69,0	1/1:1,14:15:42.07:406,42,0	1/1:6,30:36:90.07:850,90,0	1/1:2,31:33:59.92:862,60,0	1/1:2,13:15:36.05:348,36,0	0/0:20,0:20:48.13:0,48,569	0/0:30,0:30:87.22:0,87,1034	0/0:20,0:20:60.15:0,60,689	1/1:2,18:20:48.08:464,48,0	1/1:2,29:31:87.14:840,87,0	1/1:2,26:28:63.10:608,63,0	1/1:5,9:14:18.03:174,18,0
chr10	80959319	.	TTTAA	T	2689.40	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-2.412;DP=492;FS=1.133;HRun=0;HaplotypeScore=119.6208;InbreedingCoeff=0.9613;MQ=77.06;MQ0=0;MQRankSum=-2.544;QD=39.55;ReadPosRankSum=1.696;VQSLOD=3.9279;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:24.08:487,24,0	0/0:13,0:13:39.13:0,39,775	0/0:17,0:12:33.08:0,33,553	0/0:18,0:15:9.74:0,10,390	0/0:25,0:25:74.91:0,75,1421	0/0:17,0:17:51.18:0,51,1407	1/1:0,0:12:32.56:216,33,0	0/0:29,0:29:86.61:0,87,1408	0/0:18,0:18:54.19:0,54,1464	0/0:22,0:22:66.22:0,66,1208	0/0:24,0:24:72.22:0,72,1341	0/0:12,0:12:36.12:0,36,966	1/1:0,20:20:48.16:987,48,0	1/1:0,24:24:57.20:1159,57,0	0/0:15,0:15:45.15:0,45,868	0/0:22,0:22:62.87:0,63,1142	0/0:17,0:17:50.96:0,51,979	0/0:13,0:13:32.94:0,33,576	0/0:17,0:17:51.17:0,51,986	0/0:24,0:24:70.94:0,71,1279	0/0:4,0:4:12.04:0,12,222	0/0:14,0:14:42.13:0,42,1066	0/0:25,0:25:72.23:0,72,1842	0/0:11,0:11:33.11:0,33,880	0/0:12,0:12:36.12:0,36,707	0/0:28,0:28:84.26:0,84,1580	0/0:24,0:24:72.25:0,72,1453	0/0:3,0:3:9.03:0,9,188
chr10	80959368	.	CA	C	9706.32	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=9.275;DP=479;FS=6.844;HRun=4;HaplotypeScore=64.2957;InbreedingCoeff=0.9925;MQ=78.25;MQ0=0;MQRankSum=-1.462;QD=33.94;ReadPosRankSum=1.233;VQSLOD=5.4737;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:24.08:0,24,336	1/1:1,8:9:24.07:288,24,0	0/0:14,0:14:36.12:0,36,481	0/0:8,0:8:24.06:0,24,307	1/1:2,21:23:63.19:756,63,0	0/0:23,0:23:69.23:0,69,966	0/0:15,0:15:45.06:0,45,586	1/1:3,28:31:84.25:997,84,0	0/0:21,0:21:63.21:0,63,882	1/1:1,26:27:78.24:936,78,0	1/1:2,20:22:60.18:719,60,0	0/0:16,0:16:45.14:0,45,602	0/0:15,0:15:42.14:0,42,588	0/0:27,0:27:72.18:0,72,965	1/1:0,16:16:48.15:576,48,0	1/1:0,16:16:45.14:540,45,0	1/1:0,14:14:42.13:504,42,0	1/1:1,7:8:21.06:252,21,0	1/1:0,16:16:48.13:564,48,0	1/1:0,20:20:60.18:720,60,0	1/1:0,7:7:21.06:252,21,0	0/0:6,0:6:18.06:0,18,252	0/0:23,0:23:66.21:0,66,906	0/0:10,0:10:30.10:0,30,417	1/1:1,17:18:51.16:612,51,0	1/1:1,26:27:75.20:875,75,0	1/1:0,28:28:81.25:971,81,0	1/1:0,4:4:12.04:144,12,0
chr10	80962370	.	G	GA	5158.32	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-8.555;DP=581;FS=2.039;HRun=8;HaplotypeScore=74.8770;InbreedingCoeff=0.9934;MQ=81.81;MQ0=0;MQRankSum=-1.633;QD=28.98;ReadPosRankSum=3.989;VQSLOD=4.8809;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:54.63:624,55,0	0/0:8,0:8:18.01:0,18,165	0/0:25,0:25:49.94:0,50,517	0/0:9,0:9:12:0,12,110	0/0:37,0:37:99:0,101,931	1/1:4,17:21:48.14:554,48,0	0/0:18,0:18:47.99:0,48,430	0/0:23,0:23:56.99:0,57,509	1/1:1,22:23:57.17:658,57,0	0/0:19,0:19:51.02:0,51,467	0/0:23,0:23:63.02:0,63,572	1/1:3,17:20:51.15:589,51,0	1/1:5,22:27:66.20:760,66,0	1/1:2,12:14:33.10:381,33,0	0/0:29,0:29:78.02:0,78,709	0/0:25,0:25:69.01:0,69,623	0/0:28,0:28:72.02:0,72,654	0/0:10,0:10:30.02:0,30,274	0/0:18,0:18:48.02:0,48,438	0/0:38,0:38:99:0,102,929	0/0:16,0:16:48.03:0,48,439	1/1:1,14:15:42.12:485,42,0	1/1:3,15:18:45.13:519,45,0	1/1:0,17:17:51.15:589,51,0	0/0:12,0:12:33.02:0,33,302	0/0:28,0:28:72.03:0,72,659	0/0:26,0:25:66.02:0,66,604	0/0:11,0:11:24.01:0,24,219
chr10	80964186	.	ACACACG	A	9501.77	PASS	AB=0.603;AC=36;AF=0.643;AN=56;BaseQRankSum=11.291;DP=659;FS=0.000;HRun=0;HaplotypeScore=147.5647;InbreedingCoeff=0.8287;MQ=56.71;MQ0=9;MQRankSum=-8.472;QD=21.16;ReadPosRankSum=2.246;VQSLOD=4.0986;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,20:38:12.08:253,12,0	1/1:1,4:5:12.04:252,12,0	0/0:39,0:20:20.99:0,21,280	0/0:27,0:16:12.01:0,12,141	1/1:11,15:26:21.07:442,21,0	0/0:24,0:24:51.17:0,51,1577	0/0:22,0:22:30.06:0,30,803	1/1:17,16:33:48.06:650,48,0	0/0:13,0:13:27.09:0,27,831	1/1:14,15:29:46.34:834,46,0	1/1:7,17:24:36.04:711,36,0	0/0:24,0:24:54.15:0,54,1334	1/1:10,15:25:30.10:631,30,0	1/1:8,9:17:14.44:315,14,0	1/1:8,26:34:45.15:946,45,0	0/1:13,24:37:16.88:898,0,17	1/1:8,16:24:16.53:297,17,0	0/1:7,14:21:6.40:362,0,6	1/1:7,8:14:21.03:329,21,0	1/1:6,13:19:9.03:189,9,0	1/1:15,0:15:15.04:217,15,0	0/0:14,0:14:30.09:0,30,829	0/0:20,0:20:40.67:0,41,1124	0/0:27,0:27:66.21:0,66,1966	1/1:5,16:21:24.08:505,24,0	1/1:11,12:24:36.05:576,36,0	1/1:19,14:33:30.02:591,30,0	1/1:1,8:9:24.08:505,24,0
chr10	80964716	.	G	GA	9194.95	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-14.844;DP=585;FS=21.367;HRun=7;HaplotypeScore=53.2518;InbreedingCoeff=0.9966;MQ=79.50;MQ0=0;MQRankSum=-2.125;QD=30.75;ReadPosRankSum=0.706;VQSLOD=3.0551;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:38:96.14:0,96,926	1/1:0,5:5:15.05:181,15,0	0/0:18,0:18:38.52:0,39,342	0/0:27,0:26:58.86:0,59,538	1/1:2,21:24:63.06:739,63,0	0/0:31,0:31:81.11:0,81,775	0/0:24,0:24:66.10:0,66,637	1/1:5,32:37:99:1182,99,0	0/0:26,0:26:72.12:0,72,695	1/1:2,12:14:36.11:435,36,0	1/1:2,19:21:28.20:622,28,0	0/0:26,0:26:63.07:0,63,601	0/0:23,0:23:66.09:0,66,632	0/0:24,0:24:51.08:0,51,492	1/1:2,23:25:66.20:797,66,0	1/1:2,18:20:51.16:616,51,0	1/1:2,22:24:51.16:613,51,0	1/1:5,11:16:30.09:362,30,0	1/1:0,12:12:36.11:434,36,0	1/1:0,17:17:51.16:616,51,0	1/1:1,10:11:30.09:362,30,0	0/0:9,0:9:21.03:0,21,203	0/0:14,0:14:39.06:0,39,377	0/0:26,0:26:75.12:0,75,724	1/1:2,22:23:63.19:761,63,0	1/1:2,18:20:54.15:640,54,0	1/1:5,16:21:45.14:543,45,0	1/1:0,8:8:24.07:290,24,0
chr10	80964783	.	CGT	C	926.55	PASS	AB=0.854;AC=20;AF=0.400;AN=50;BaseQRankSum=6.367;DP=629;FS=0.682;HRun=0;HaplotypeScore=101.4727;InbreedingCoeff=0.1804;MQ=69.17;MQ0=21;MQRankSum=-1.924;QD=2.81;ReadPosRankSum=2.909;VQSLOD=2.0414;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:32:14.58:31,0,15	./.	./.	./.	0/1:27,1:25:39.69:40,0,98	0/1:13,10:21:4.06:154,0,4	0/1:24,2:27:8.32:8,0,231	0/0:25,0:24:0:0,0,0	1/1:20,3:24:9.08:61,9,0	0/0:18,0:18:8.51:0,9,94	0/0:24,1:25:0.23:0,0,261	0/1:13,5:17:30.35:85,0,30	1/1:10,0:20:14.20:70,14,0	1/1:6,1:20:22.89:130,23,0	0/0:20,0:19:21.04:0,21,266	0/0:23,0:22:30.38:0,30,330	0/0:27,0:28:3.89:0,4,162	0/1:19,1:19:34.90:35,0,114	0/0:13,0:12:3:0,3,26	0/1:21,1:22:20.17:20,0,120	0/0:22,0:21:6.47:0,6,68	1/1:9,5:15:8.85:78,9,0	1/1:10,7:18:5.73:64,6,0	1/1:22,10:31:20.94:199,21,0	0/1:25,2:27:99:114,0,108	0/0:24,0:24:14.28:0,14,180	0/0:15,0:14:6.01:0,6,67	0/0:8,0:10:9:0,9,79
chr10	80966321	.	ATAT	A	17617.90	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=16.515;DP=665;FS=8.393;HRun=0;HaplotypeScore=100.6880;InbreedingCoeff=0.9976;MQ=93.16;MQ0=0;MQRankSum=-8.106;QD=46.24;ReadPosRankSum=1.169;VQSLOD=6.9011;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.26:0,75,1771	1/1:1,11:12:33.11:582,33,0	0/0:28,0:28:80.08:0,80,1767	0/0:33,0:33:81.52:0,82,1944	1/1:0,27:27:72.25:1266,72,0	0/0:30,0:30:90.31:0,90,2101	0/0:20,0:20:60.19:0,60,1329	1/1:2,30:32:93.32:1597,93,0	0/0:25,0:25:72.25:0,72,1696	1/1:0,30:30:87.30:1531,87,0	1/1:1,22:23:63.17:1078,63,0	0/0:19,0:19:51.17:0,51,1158	0/0:20,0:20:60.21:0,60,1417	0/0:17,0:17:51.18:0,51,1206	1/1:1,26:27:60.21:1058,60,0	1/1:1,17:18:27.09:476,27,0	1/1:0,28:28:72.25:1265,72,0	1/1:0,7:7:21.07:370,21,0	1/1:1,24:25:69.22:1182,69,0	1/1:0,27:27:78.22:1338,78,0	1/1:1,24:25:66.23:1158,66,0	0/0:23,0:23:69.24:0,69,1603	0/0:24,0:24:72.25:0,72,1703	0/0:20,0:20:60.21:0,60,1417	1/1:0,21:21:60.21:1052,60,0	1/1:1,28:29:16.31:1394,16,0	1/1:0,36:36:93.19:1636,93,0	1/1:0,14:14:36.12:633,36,0
chr10	80966772	.	TAG	T	5071.10	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=0.140;DP=535;FS=2.951;HRun=0;HaplotypeScore=112.3779;InbreedingCoeff=0.9443;MQ=68.94;MQ0=13;MQRankSum=-3.058;QD=19.28;ReadPosRankSum=-3.166;VQSLOD=4.2040;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:25:57.91:0,58,482	1/1:3,0:3:6:54,6,0	0/0:33,0:16:48.04:0,48,601	0/0:38,0:24:58.48:0,58,667	1/1:25,0:25:51.65:401,52,0	0/0:19,0:19:11.22:0,11,106	0/0:17,0:17:41.17:0,41,770	1/1:30,0:29:79.29:695,79,0	0/0:23,0:23:55.04:0,55,454	1/1:5,9:14:38.94:336,39,0	1/1:14,0:14:32.46:265,32,0	0/0:16,0:15:14.98:0,15,127	0/0:16,0:15:33.40:0,33,311	0/0:16,0:16:32.28:0,32,292	1/1:22,2:24:66.87:592,67,0	1/1:15,0:15:41.50:350,41,0	1/1:21,0:21:32.06:371,32,0	1/1:6,0:6:14.66:112,15,0	1/1:13,1:14:39.52:376,40,0	1/1:19,1:18:30.67:222,31,0	1/1:18,0:16:47.85:392,48,0	0/0:17,0:17:8.33:0,8,74	0/0:25,0:25:59.28:0,59,479	0/0:24,0:23:55.90:0,56,422	1/1:15,0:15:38.96:337,39,0	1/1:17,0:17:50.92:440,51,0	1/1:1,21:22:4.99:27,5,0	1/1:4,0:4:11.98:101,12,0
chr10	80966790	.	GTGTGTA	G	4731.13	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=2.052;DP=523;FS=0.000;HRun=0;HaplotypeScore=129.5037;InbreedingCoeff=0.2481;MQ=57.19;MQ0=28;MQRankSum=-0.879;QD=10.07;ReadPosRankSum=0.119;VQSLOD=3.8061;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:36:42.25:297,0,42	1/1:3,0:3:3:25,3,0	0/0:26,0:9:13.76:0,14,103	0/1:27,0:14:30:30,0,36	1/1:21,0:21:8.77:51,9,0	1/1:4,24:28:3.01:68,3,0	0/0:27,0:25:31.02:0,31,462	1/1:13,0:12:23.83:182,24,0	1/1:24,1:24:44.78:399,45,0	1/1:13,0:12:26.92:214,27,0	1/1:15,0:15:29.79:244,30,0	1/1:7,13:19:3.01:62,3,0	0/1:17,0:15:51.09:194,0,51	0/1:23,0:23:99:158,0,123	1/1:22,0:22:44.94:414,45,0	1/1:12,0:12:35.84:284,36,0	1/1:15,0:15:7.15:190,7,0	1/1:6,0:5:11.74:88,12,0	1/1:8,0:5:11.87:89,12,0	1/1:26,0:24:11.80:100,12,0	1/1:24,0:20:41.87:333,42,0	1/1:1,18:19:2.87:16,3,0	1/1:22,0:22:44.93:390,45,0	1/1:27,0:26:44.67:357,45,0	1/1:12,0:10:20.98:177,21,0	1/1:15,0:14:35.86:290,36,0	1/1:12,0:12:4.90:31,5,0	1/1:3,0:2:5.99:50,6,0
chr10	80966794	.	GTA	G	5279.54	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=3.450;DP=540;FS=5.278;HRun=0;HaplotypeScore=110.4339;InbreedingCoeff=0.5135;MQ=56.23;MQ0=28;MQRankSum=-0.360;QD=10.84;ReadPosRankSum=-0.231;VQSLOD=4.2727;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:35:48.64:371,49,0	1/1:4,0:4:5.99:48,6,0	0/0:24,0:8:13.76:0,14,103	0/1:25,0:12:29.70:30,0,35	1/1:1,19:20:8.77:51,9,0	1/1:28,0:28:2.99:23,3,0	0/0:29,0:27:25.61:0,26,359	1/1:12,0:11:17.14:189,17,0	1/1:26,0:25:47.81:377,48,0	1/1:13,0:12:29.92:240,30,0	1/1:18,0:18:32.73:268,33,0	1/1:19,0:18:2.97:20,3,0	1/1:18,0:16:32.26:252,32,0	1/1:22,0:22:29.83:224,30,0	1/1:27,0:26:59.82:473,60,0	1/1:15,0:14:41.76:323,42,0	1/1:19,0:19:16.68:255,17,0	1/1:8,0:6:14.87:109,15,0	1/1:8,0:5:14.82:108,15,0	1/1:4,23:25:11.77:73,12,0	1/1:24,0:20:44.86:356,45,0	1/1:19,0:19:2.88:16,3,0	1/1:21,0:21:44.89:362,45,0	1/1:28,0:27:53.59:427,54,0	1/1:16,0:14:32.80:255,33,0	1/1:15,0:14:41.86:341,42,0	1/1:13,0:13:5.58:40,6,0	1/1:4,0:3:5.95:50,6,0
chr10	80969201	.	ATC	A	5813.36	PASS	AB=0.995;AC=43;AF=0.768;AN=56;BaseQRankSum=11.972;DP=720;FS=15.270;HRun=0;HaplotypeScore=161.5147;InbreedingCoeff=0.3108;MQ=69.76;MQ0=1;MQRankSum=-2.479;QD=8.99;ReadPosRankSum=11.536;VQSLOD=2.3869;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:45,0:45:16.44:378,16,0	1/1:8,0:8:18.18:82,18,0	0/0:24,0:20:50.14:0,50,973	0/0:20,0:18:29.93:0,30,725	0/1:25,1:26:49.76:208,0,50	0/1:28,0:27:6.63:206,0,7	0/0:29,0:29:82.12:0,82,1462	0/1:29,0:29:93.53:94,0,188	1/1:25,0:25:38.36:250,38,0	1/1:22,0:22:47.52:174,48,0	0/1:12,0:12:13.29:110,0,13	0/1:26,0:26:9.99:193,0,10	1/1:27,0:27:72.81:323,73,0	1/1:30,1:31:32.57:306,33,0	1/1:34,0:34:17.91:276,18,0	1/1:26,0:26:15.15:210,15,0	1/1:36,0:36:67.99:380,68,0	1/1:28,0:28:24.80:250,25,0	0/1:14,0:13:54.50:57,0,54	1/1:18,0:18:19.14:176,19,0	0/1:41,0:41:63.01:275,0,63	1/1:25,0:25:61.76:296,62,0	1/1:18,2:20:46.47:247,46,0	1/1:29,1:30:54.59:333,55,0	1/1:28,0:28:44.74:269,45,0	1/1:27,0:27:67.50:315,67,0	1/1:32,0:32:39.15:319,39,0	1/1:9,0:9:16.53:87,17,0
chr10	80969202	.	TCC	T	19132.92	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.453;DP=715;FS=3.997;HRun=9;HaplotypeScore=116.6659;InbreedingCoeff=0.9960;MQ=69.82;MQ0=1;MQRankSum=-4.209;QD=29.80;ReadPosRankSum=6.787;VQSLOD=4.3205;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:5,40:45:99:1293,111,0	1/1:1,7:8:18.05:210,18,0	0/0:24,0:20:50.62:0,51,737	0/0:19,0:18:38.28:0,38,597	1/1:5,20:25:63.17:730,63,0	1/1:3,24:26:66.19:769,66,0	0/0:28,0:29:77.75:0,78,1213	1/1:10,19:29:57.12:651,57,0	1/1:1,24:25:63.18:734,63,0	1/1:0,22:22:63.18:734,63,0	1/1:1,11:12:27.08:314,27,0	1/1:2,23:25:60.18:699,60,0	1/1:0,27:27:81.24:944,81,0	1/1:3,28:31:81.23:944,81,0	1/1:3,31:34:93.28:1084,93,0	1/1:3,23:26:66.19:767,66,0	1/1:1,35:36:96.28:1119,96,0	1/1:2,26:28:72.20:836,72,0	1/1:3,10:12:27.06:305,27,0	1/1:1,17:18:45.13:524,45,0	1/1:7,34:41:96.26:1118,96,0	1/1:0,25:25:69.21:804,69,0	1/1:2,18:20:51.62:595,52,0	1/1:2,28:30:81.24:944,81,0	1/1:0,27:27:72.21:837,72,0	1/1:0,27:27:78.22:908,78,0	1/1:2,30:32:84.25:979,84,0	1/1:0,8:9:26.82:292,27,0
chr10	80969503	.	C	CA	2856.42	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.291;DP=661;FS=3.399;HRun=5;HaplotypeScore=61.3387;InbreedingCoeff=0.9995;MQ=90.98;MQ0=0;MQRankSum=-1.669;QD=31.39;ReadPosRankSum=2.801;VQSLOD=4.4722;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,36:38:96.31:1263,96,0	0/0:10,0:10:30.08:0,30,322	0/0:30,0:30:70.37:0,70,740	0/0:26,0:25:48.06:0,48,503	0/0:23,0:23:48.09:0,48,500	0/0:15,0:15:42.10:0,42,451	0/0:19,0:19:54.13:0,54,580	0/0:30,0:30:78.19:0,78,838	0/0:16,0:16:36.09:0,36,386	0/0:41,0:41:99:0,99,1064	0/0:16,0:16:42.09:0,42,443	0/0:26,0:25:57.14:0,57,613	1/1:1,22:23:60.20:789,60,0	1/1:4,25:29:72.23:947,72,0	0/0:27,0:27:72.12:0,72,747	0/0:24,0:23:54.12:0,54,573	0/0:25,0:24:72.18:0,72,774	0/0:16,0:16:42.10:0,42,451	0/0:18,0:18:42.10:0,42,452	0/0:20,0:20:54.12:0,54,572	0/0:29,0:29:81.20:0,81,870	0/0:31,0:31:75.19:0,75,806	0/0:19,0:19:45.11:0,45,484	0/0:20,0:20:60.13:0,60,635	0/0:20,0:19:48.12:0,48,516	0/0:26,0:26:78.18:0,78,830	0/0:32,0:31:87.22:0,87,935	0/0:11,0:10:30.08:0,30,322
chr10	80969667	.	T	TACACACACACACAC	3768.78	PASS	AB=0.841;AC=32;AF=0.615;AN=52;BaseQRankSum=0.777;DP=520;FS=1.618;HRun=0;HaplotypeScore=165.0928;InbreedingCoeff=0.5607;MQ=43.77;MQ0=20;MQRankSum=-7.614;QD=12.08;ReadPosRankSum=-4.521;VQSLOD=0.8772;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,3:23:3.01:201,3,0	1/1:10,0:9:2.98:55,3,0	0/0:22,0:10:11.67:0,12,184	0/0:26,0:10:12.01:0,12,225	1/1:12,0:14:3.01:63,3,0	0/1:8,0:15:0.15:0,0,73	0/0:25,0:26:29.67:0,30,861	1/1:16,0:9:14.20:177,14,0	0/0:7,0:18:18.97:0,19,160	1/1:14,0:22:27.02:605,27,0	./.	0/0:8,0:13:3.06:0,3,43	1/1:16,0:18:11.48:566,11,0	1/1:8,0:13:6.02:330,6,0	1/1:9,0:18:9.03:208,9,0	1/1:8,0:17:8.23:147,8,0	./.	1/1:9,0:11:3.01:58,3,0	0/1:14,0:7:23.73:24,0,92	1/1:12,0:21:3.01:102,3,0	0/0:12,0:13:2.92:0,3,17	0/0:8,0:14:14.67:0,15,127	0/0:7,0:10:2.92:0,3,17	0/0:10,0:24:17.58:0,18,105	1/1:10,0:16:3.01:63,3,0	1/1:20,0:24:41.59:696,42,0	1/1:13,0:21:3.48:64,3,0	1/1:12,0:8:13.79:411,14,0
chr10	80970369	.	A	AAT	21912.68	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-9.033;DP=508;FS=0.599;HRun=0;HaplotypeScore=47.9897;InbreedingCoeff=0.9923;MQ=82.59;MQ0=0;MQRankSum=-7.590;QD=47.23;ReadPosRankSum=4.382;VQSLOD=5.7605;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:57.20:1045,57,0	1/1:1,14:15:42.14:769,42,0	0/0:20,0:20:25.97:0,26,751	0/0:11,0:11:27.09:0,27,383	1/1:2,18:20:39.13:715,39,0	1/1:0,17:17:45.15:824,45,0	0/0:13,0:13:39.13:0,39,559	1/1:2,38:40:99:2009,114,0	1/1:5,21:26:54.18:990,54,0	1/1:2,15:17:48.15:840,48,0	1/1:0,22:22:60.21:1099,60,0	1/1:1,16:17:45.15:825,45,0	1/1:1,16:17:45.15:825,45,0	1/1:0,18:19:51.17:935,51,0	1/1:0,21:23:63.21:1136,63,0	1/1:1,14:15:42.14:745,42,0	1/1:4,10:14:27.09:495,27,0	1/1:2,17:19:48.16:879,48,0	1/1:1,15:16:45.15:825,45,0	1/1:1,21:22:60.21:1100,60,0	1/1:1,9:10:27.09:495,27,0	1/1:2,13:16:39.13:712,39,0	1/1:2,15:17:42.14:766,42,0	1/1:0,12:12:27.09:495,27,0	1/1:0,22:22:63.21:1134,63,0	1/1:1,16:17:48.16:880,48,0	1/1:3,19:22:60.21:1098,60,0	1/1:3,7:10:15.05:275,15,0
chr10	80970582	.	AACACAC	A	382.89	PASS	AB=1.000;AC=9;AF=0.173;AN=52;BaseQRankSum=2.659;DP=533;FS=0.000;HRun=0;HaplotypeScore=124.2008;InbreedingCoeff=0.3774;MQ=68.92;MQ0=25;MQRankSum=1.550;QD=3.51;ReadPosRankSum=1.794;VQSLOD=2.3212;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,1:25:6.02:120,6,0	0/0:12,0:11:12.04:0,12,260	./.	./.	0/0:16,0:16:15.03:0,15,299	0/1:27,0:27:43.83:44,0,639	0/0:28,0:26:12.02:0,12,212	0/0:27,0:25:12.04:0,12,208	0/0:18,0:16:13.40:0,13,257	0/0:13,0:10:7.50:0,7,35	0/1:11,0:11:48.13:48,0,58	0/0:18,0:18:27.33:0,27,620	1/1:11,0:11:12:165,12,0	1/1:12,3:14:6.02:120,6,0	0/0:26,0:26:18.06:0,18,429	0/0:19,0:19:15.05:0,15,355	0/1:18,0:18:24.03:24,0,54	0/0:16,0:13:12.93:0,13,226	0/0:11,0:9:11.96:0,12,132	0/0:14,0:14:3.01:0,3,68	0/0:22,0:18:2.75:0,3,62	0/0:15,0:14:9.03:0,9,216	0/0:19,0:19:27.09:0,27,669	0/0:29,0:27:18.06:0,18,425	0/0:20,0:20:9.03:0,9,224	0/0:20,0:18:24.08:0,24,523	0/0:19,0:18:9.50:0,10,164	0/0:10,0:8:12.04:0,12,214
chr10	80970628	.	CAGAGAGAGAGAG	C	2082.39	PASS	AB=1.000;AC=17;AF=0.425;AN=40;BaseQRankSum=2.746;DP=515;FS=7.974;HRun=0;HaplotypeScore=188.9640;InbreedingCoeff=0.6396;MQ=39.25;MQ0=41;MQRankSum=-5.069;QD=13.35;ReadPosRankSum=0.771;VQSLOD=1.4629;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:27:0.43:0,0,1	1/1:9,4:13:11.73:400,12,0	./.	./.	./.	0/0:26,0:25:27.09:0,27,1007	0/0:24,0:22:27.56:0,28,1337	0/1:21,0:21:0:0,0,0	0/0:20,0:18:11.57:0,12,344	1/1:19,0:17:4.22:185,4,0	./.	0/0:26,0:26:23.87:0,24,762	1/1:14,0:20:4.64:163,5,0	./.	0/0:15,11:26:2.92:0,3,17	1/1:9,4:14:5.64:185,6,0	0/0:15,6:19:1.77:0,2,4	1/1:13,0:9:2.97:96,3,0	1/1:9,2:10:9.03:295,9,0	./.	0/0:19,0:13:0.47:0,0,1	0/0:21,0:18:3.01:0,3,107	0/0:20,0:19:5.72:0,6,245	0/0:27,0:25:24.08:0,24,1000	./.	1/1:16,5:19:12.04:366,12,0	1/1:7,9:17:18.06:533,18,0	./.
chr10	80970634	.	G	GAG	589.40	PASS	AB=1.000;AC=15;AF=0.417;AN=36;BaseQRankSum=-4.447;DP=483;FS=0.000;HRun=0;HaplotypeScore=148.1445;InbreedingCoeff=0.5199;MQ=39.51;MQ0=40;MQRankSum=5.046;QD=2.68;ReadPosRankSum=-0.916;VQSLOD=2.3159;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:26:0:0,0,0	0/0:12,0:11:11.35:0,11,56	./.	./.	./.	1/1:24,0:22:17.97:147,18,0	0/1:25,0:24:9.31:120,0,9	./.	1/1:18,0:16:9.34:76,9,0	0/0:18,0:16:5.68:0,6,28	./.	1/1:24,0:24:17.77:131,18,0	0/0:23,0:20:5.22:0,5,29	./.	./.	0/0:13,0:13:3.01:0,3,16	0/1:20,0:18:0:1,0,0	0/0:10,0:7:2.79:0,3,16	0/0:13,0:10:5.68:0,6,28	./.	0/1:17,0:11:0:0,0,0	1/1:17,5:20:2.99:25,3,0	0/1:17,0:16:0:0,0,0	1/1:23,0:21:29.56:215,30,0	./.	0/0:19,0:17:8.18:0,8,37	0/0:17,0:17:14.37:0,14,75	./.
chr10	80971476	.	C	CGA	837.61	PASS	AB=0.933;AC=31;AF=0.674;AN=46;BaseQRankSum=-2.582;DP=530;FS=26.077;HRun=0;HaplotypeScore=76.9363;InbreedingCoeff=0.4009;MQ=66.83;MQ0=24;MQRankSum=0.753;QD=2.82;ReadPosRankSum=-0.600;VQSLOD=0.1743;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:23:0.89:2,1,0	./.	./.	./.	./.	0/0:12,0:12:2.99:0,3,32	0/1:12,4:15:22.87:79,0,23	1/1:23,0:23:2.98:21,3,0	1/1:20,0:20:8.89:93,9,0	0/1:18,0:18:2.89:23,0,3	1/1:18,0:18:9:84,9,0	1/1:10,0:10:3:25,3,0	0/0:14,0:16:2.84:0,3,14	0/0:9,0:9:2.38:0,2,12	1/1:12,0:12:3.01:38,3,0	1/1:13,0:13:3:25,3,0	1/1:18,0:18:9.96:106,10,0	1/1:17,0:16:5.99:48,6,0	1/1:13,0:13:3.48:36,3,0	0/1:18,0:18:0:0,0,0	1/1:21,0:18:13.77:140,14,0	0/0:19,0:20:6.30:0,6,39	0/0:12,0:12:8.69:0,9,60	0/0:11,0:14:17.54:0,18,138	./.	1/1:22,0:22:8.89:65,9,0	1/1:24,0:23:17.87:171,18,0	1/1:8,0:8:2.24:21,2,0
chr10	80971522	.	A	AGAGAGC	5394.69	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=-3.021;DP=534;FS=10.638;HRun=0;HaplotypeScore=112.8594;InbreedingCoeff=0.8236;MQ=65.05;MQ0=21;MQRankSum=-1.885;QD=14.82;ReadPosRankSum=-0.017;VQSLOD=3.6029;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:7.10:0,7,253	1/1:10,0:10:14.84:101,15,0	0/0:23,0:11:19.96:0,20,183	0/0:25,0:9:11.10:0,11,97	1/1:25,0:25:49.44:347,49,0	0/0:21,0:21:50.85:0,51,462	0/0:13,0:12:26.34:0,26,233	1/1:35,0:33:61.35:564,61,0	0/1:18,0:18:19.33:19,0,156	1/1:18,0:18:45.80:489,46,0	1/1:17,0:17:41.73:356,42,0	0/1:15,0:15:1.02:1,0,145	0/0:6,0:6:9:0,9,87	0/0:9,0:8:20.94:0,21,169	1/1:21,0:21:31.56:241,32,0	1/1:15,0:15:23.62:195,24,0	1/1:23,0:23:46.41:453,46,0	1/1:15,0:14:7.68:218,8,0	1/1:19,0:20:6.82:394,7,0	1/1:26,0:26:42.65:320,43,0	1/1:22,0:20:21.77:329,22,0	0/0:19,0:19:18.44:0,18,148	0/0:16,0:16:41.99:0,42,446	0/0:15,0:15:30.04:0,30,455	1/1:14,0:14:11.94:91,12,0	1/1:21,0:21:50.77:691,51,0	1/1:2,17:24:16.17:205,16,0	1/1:24,0:23:56.37:380,56,0
chr10	80971734	.	GTGTGTA	G	4178.96	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=2.566;DP=680;FS=2.856;HRun=0;HaplotypeScore=176.4297;InbreedingCoeff=0.0114;MQ=52.21;MQ0=25;MQRankSum=2.354;QD=6.29;ReadPosRankSum=2.416;VQSLOD=2.7931;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:32:31.97:32,0,123	1/1:8,1:9:12.95:136,13,0	0/1:36,0:6:16.75:17,0,19	0/1:42,0:9:2.92:3,0,30	1/1:30,0:30:16.35:127,16,0	1/1:22,0:22:22.34:338,22,0	0/0:16,0:16:24.75:0,25,549	0/1:25,0:21:19.72:254,0,20	1/1:31,0:30:23.75:169,24,0	1/1:26,0:25:31.24:395,31,0	1/1:24,0:23:20.33:168,20,0	1/1:23,1:23:12.94:82,13,0	0/1:22,0:20:76.69:166,0,77	0/1:26,0:25:99:146,0,134	1/1:26,0:26:10.85:145,11,0	1/1:31,0:31:29.87:233,30,0	0/1:12,0:12:14.02:36,0,14	0/1:16,0:15:19.47:82,0,19	0/1:18,0:18:24.87:122,0,25	1/1:27,0:27:15.76:158,16,0	1/1:35,1:35:2.99:23,3,0	1/1:22,1:23:16.70:164,17,0	1/1:21,0:21:8.96:96,9,0	1/1:30,0:30:29.86:226,30,0	1/1:24,1:25:26.13:194,26,0	1/1:17,1:18:53.52:440,54,0	1/1:19,0:19:17.43:106,17,0	1/1:12,0:12:10.98:120,11,0
chr10	80971736	.	GTGTA	G	8281.88	PASS	AB=0.880;AC=47;AF=0.839;AN=56;BaseQRankSum=2.676;DP=680;FS=0.000;HRun=0;HaplotypeScore=148.3545;InbreedingCoeff=0.1305;MQ=52.86;MQ0=24;MQRankSum=2.787;QD=12.51;ReadPosRankSum=2.845;VQSLOD=4.4998;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:33:53.94:54,0,54	1/1:1,8:9:17.76:254,18,0	0/1:36,0:7:13.75:14,0,41	0/1:40,0:8:2.97:3,0,29	1/1:1,28:29:21.07:375,21,0	1/1:18,5:23:38.33:643,38,0	0/0:18,0:18:33.85:0,34,503	1/1:29,0:25:30.59:421,31,0	1/1:2,29:30:24.01:407,24,0	1/1:2,24:25:52.65:709,53,0	1/1:3,22:24:20.91:372,21,0	1/1:2,23:24:18:318,18,0	0/1:22,0:20:4.74:191,0,5	0/1:26,0:25:36.70:179,0,37	1/1:7,20:27:10.67:337,11,0	1/1:3,26:29:30.03:528,30,0	0/1:2,9:11:13.97:104,0,14	0/1:5,9:13:12.99:174,0,13	1/1:6,10:16:21.14:281,21,0	1/1:3,23:26:20.81:331,21,0	1/1:4,32:35:3.48:58,3,0	1/1:5,19:24:19.99:304,20,0	1/1:1,21:22:9.03:148,9,0	1/1:2,29:31:10.12:543,10,0	1/1:3,22:25:26.23:422,26,0	1/1:1,17:18:53.56:472,54,0	1/1:2,16:18:18.43:335,18,0	1/1:6,4:10:14.59:304,15,0
chr10	80971738	.	GTA	G	4970.84	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=4.721;DP=674;FS=1.450;HRun=0;HaplotypeScore=144.5092;InbreedingCoeff=0.4078;MQ=53.32;MQ0=24;MQRankSum=1.978;QD=8.11;ReadPosRankSum=4.310;VQSLOD=4.7735;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:33:1.61:79,2,0	1/1:9,0:9:17.66:124,18,0	0/1:40,0:9:14.57:15,0,68	0/0:42,0:10:2.68:0,3,66	1/1:28,0:28:20.88:162,21,0	1/1:23,0:23:47.20:431,47,0	0/0:19,0:19:21.84:0,22,390	1/1:7,23:26:34.04:443,34,0	1/1:30,0:29:23.86:181,24,0	1/1:26,0:25:52.51:483,53,0	1/1:25,0:24:20.30:156,20,0	1/1:25,0:24:17.88:137,18,0	1/1:22,0:20:43.67:300,44,0	1/1:25,0:24:22.76:271,23,0	1/1:24,0:24:5.71:128,6,0	1/1:28,0:28:29.88:237,30,0	0/1:10,0:10:14:40,0,14	1/1:12,0:11:13.72:95,14,0	1/1:16,0:16:19.63:214,20,0	1/1:25,0:25:17.10:135,17,0	1/1:35,0:34:3.46:25,3,0	1/1:24,0:24:19.92:142,20,0	1/1:22,0:22:8.78:69,9,0	1/1:30,0:30:9.95:220,10,0	1/1:25,0:25:22.92:186,23,0	1/1:18,0:18:53.50:393,53,0	1/1:17,1:18:17.94:141,18,0	1/1:9,0:9:15.15:162,15,0
chr10	80971740	.	A	ATGTGTG	819.39	PASS	AB=0.981;AC=12;AF=0.214;AN=56;BaseQRankSum=-6.529;DP=679;FS=13.074;HRun=0;HaplotypeScore=189.1794;InbreedingCoeff=0.4594;MQ=54.50;MQ0=23;MQRankSum=1.185;QD=4.34;ReadPosRankSum=-6.418;VQSLOD=-0.5714;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,13:35:8.46:90,8,0	0/0:9,0:9:2.18:0,2,126	0/0:40,0:10:5.92:0,6,152	0/0:43,0:12:23.44:0,23,221	0/0:28,0:28:17.75:0,18,161	0/1:24,0:24:29.38:29,0,126	0/0:19,0:20:20.28:0,20,527	1/1:31,0:27:14.17:129,14,0	0/0:32,0:31:17.81:0,18,156	0/1:26,0:25:16.35:16,0,82	0/0:24,0:23:18:0,18,198	0/0:25,0:24:15.03:0,15,167	1/1:21,0:19:27.39:327,27,0	1/1:24,1:24:26.97:375,27,0	0/0:24,0:24:23.92:0,24,260	0/0:28,0:28:26.95:0,27,262	0/0:12,0:12:12.03:0,12,152	0/1:11,0:11:6.07:6,0,49	0/1:14,0:14:11.50:12,0,32	0/0:24,0:24:17.94:0,18,199	0/0:34,0:34:3.01:0,3,31	0/0:24,0:24:17.69:0,18,161	0/0:22,0:22:8.83:0,9,99	0/0:30,0:30:32.72:0,33,300	0/0:26,0:26:17.38:0,17,207	0/0:18,0:18:9.99:0,10,89	0/0:17,0:17:15.95:0,16,158	0/0:9,0:9:6.22:0,6,70
chr10	80972690	.	GTATA	G	7773.03	PASS	AB=0.542;AC=46;AF=0.852;AN=54;BaseQRankSum=-2.272;DP=296;FS=0.000;HRun=0;HaplotypeScore=58.4594;InbreedingCoeff=0.4864;MQ=75.10;MQ0=3;MQRankSum=-2.242;QD=29.44;ReadPosRankSum=3.252;VQSLOD=4.4965;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,6:7:9.03:154,9,0	1/1:2,0:2:3.01:51,3,0	0/0:10,0:8:5.37:0,5,98	0/0:18,0:10:5.63:0,6,22	1/1:4,12:16:32.98:471,33,0	1/1:2,0:19:42.05:390,42,0	0/0:2,0:2:6.02:0,6,151	1/1:8,39:47:99:1805,123,0	1/1:1,0:7:15.02:139,15,0	1/1:2,5:7:15:222,15,0	1/1:3,7:10:20.93:293,21,0	1/1:2,0:9:14.99:132,15,0	1/1:2,1:3:3.01:51,3,0	1/1:4,9:13:18.06:308,18,0	1/1:0,3:3:6.02:103,6,0	1/1:2,3:5:8.96:121,9,0	1/1:2,8:10:18.06:309,18,0	1/1:0,8:6:12.04:206,12,0	1/1:5,13:18:39.11:594,39,0	1/1:3,10:13:30.07:482,30,0	1/1:0,2:2:3.01:51,3,0	0/1:0,0:3:6.60:47,0,7	0/1:2,0:7:0.60:97,0,1	./.	1/1:7,13:20:27.09:463,27,0	1/1:2,8:10:24.05:358,24,0	1/1:2,13:15:27.09:461,27,0	1/1:0,9:9:27.09:463,27,0
chr10	80973424	.	ATG	A	14991.85	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=7.154;DP=809;FS=5.658;HRun=0;HaplotypeScore=130.1923;InbreedingCoeff=0.9995;MQ=76.46;MQ0=1;MQRankSum=-4.866;QD=32.10;ReadPosRankSum=3.488;VQSLOD=6.8682;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:93.32:0,93,1578	1/1:1,8:9:24.04:299,24,0	0/0:34,0:34:84.27:0,84,1379	0/0:36,0:34:87.28:0,87,1458	1/1:3,44:47:99:1456,123,0	0/0:28,0:28:66.23:0,66,1128	0/0:25,0:25:63.20:0,63,1035	1/1:7,18:25:54.15:686,54,0	0/0:24,0:24:63.20:0,63,1030	1/1:4,40:44:99:1594,120,0	1/1:1,31:32:83.97:1013,84,0	0/0:28,0:28:69.16:0,69,1108	0/0:27,0:27:81.28:0,81,1399	0/0:26,0:26:72.25:0,72,1223	1/1:4,35:39:93.31:1239,93,0	1/1:1,28:29:63.21:839,63,0	1/1:2,19:20:51.12:658,51,0	1/1:1,13:14:33.11:438,33,0	1/1:2,17:19:51.17:668,51,0	1/1:6,39:45:99:1419,108,0	1/1:0,16:16:45.15:599,45,0	0/0:30,0:30:78.23:0,78,1320	0/0:27,0:27:69.24:0,69,1187	0/0:21,0:21:57.19:0,57,975	1/1:2,34:36:96.32:1279,96,0	1/1:4,27:31:75.25:998,75,0	1/1:2,48:50:99:1457,111,0	1/1:1,9:10:27.08:349,27,0
chr10	80973495	.	TGA	T	5176.35	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-8.903;DP=880;FS=9.760;HRun=0;HaplotypeScore=174.0560;InbreedingCoeff=0.9969;MQ=71.76;MQ0=4;MQRankSum=-2.572;QD=26.96;ReadPosRankSum=3.659;VQSLOD=5.8979;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:86.92:0,87,1729	0/0:12,0:12:36.12:0,36,598	0/0:32,0:24:36.05:0,36,503	0/0:34,0:30:23.74:0,24,443	0/0:39,0:39:81.28:0,81,1331	1/1:6,26:31:48.15:606,48,0	0/0:30,1:31:34.37:0,34,1051	0/0:31,0:31:72.22:0,72,1102	1/1:0,33:33:81.26:1022,81,0	0/0:32,0:32:69.22:0,69,1097	0/0:34,0:34:84.24:0,84,1350	1/1:1,26:27:66.21:833,66,0	0/0:27,0:27:72.23:0,72,1154	0/0:31,0:31:75.23:0,75,1174	0/0:44,0:44:99:0,99,1609	0/0:39,2:41:32.65:0,33,1605	0/0:24,0:24:60.13:0,60,912	0/0:14,0:14:33.05:0,33,474	0/0:21,0:21:57.17:0,57,878	0/0:40,1:41:99:0,108,1723	0/0:51,0:51:99:0,138,2258	1/1:6,33:39:84.27:1059,84,0	1/1:6,25:31:16.37:711,16,0	1/1:2,28:30:75.24:946,75,0	0/0:22,0:22:54.17:0,54,853	0/0:28,0:28:78.25:0,78,1247	0/0:41,0:40:90.28:0,90,1450	0/0:12,0:12:33.10:0,33,511
chr10	80973696	.	CT	C	3532.38	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.751;DP=813;FS=5.669;HRun=3;HaplotypeScore=78.4644;InbreedingCoeff=0.9980;MQ=86.53;MQ0=0;MQRankSum=-2.527;QD=35.32;ReadPosRankSum=1.805;VQSLOD=4.3611;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:99:1264,102,0	0/0:9,0:9:27.09:0,27,389	0/0:24,0:24:69.15:0,69,907	0/0:30,0:30:84.15:0,84,1053	0/0:31,0:31:93.31:0,93,1338	0/0:19,0:19:57.17:0,57,801	0/0:27,0:27:78.24:0,78,1086	0/0:34,0:34:99:0,102,1454	0/0:39,0:39:99:0,117,1685	0/0:31,0:31:87.26:0,87,1205	0/0:29,0:29:84.28:0,84,1210	0/0:35,0:35:99:0,102,1468	1/1:0,30:30:87.27:1079,87,0	1/1:1,34:35:96.30:1190,96,0	0/0:42,0:42:99:0,123,1772	0/0:40,0:40:99:0,117,1667	0/0:17,0:17:45.15:0,45,648	0/0:10,0:10:30.10:0,30,431	0/0:37,0:37:99:0,105,1477	0/0:38,0:38:99:0,114,1606	0/0:41,0:41:99:0,114,1635	0/0:18,0:18:54.17:0,54,752	0/0:23,0:23:66.20:0,66,906	0/0:25,0:25:72.24:0,72,1037	0/0:24,0:24:72.23:0,72,1006	0/0:42,0:42:99:0,126,1795	0/0:41,0:41:99:0,117,1645	0/0:7,0:7:21.05:0,21,281
chr10	80974109	.	T	TAA	12912.96	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-4.037;DP=398;FS=10.926;HRun=7;HaplotypeScore=45.4771;InbreedingCoeff=0.9427;MQ=65.68;MQ0=4;MQRankSum=-0.106;QD=39.73;ReadPosRankSum=1.276;VQSLOD=3.3427;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.23:0,84,965	1/1:0,3:3:9.03:148,9,0	0/0:7,0:5:8.71:0,9,101	0/0:11,0:11:24.04:0,24,266	1/1:0,26:26:78.07:1115,78,0	1/1:2,19:20:45.15:739,45,0	0/0:5,0:5:12.03:0,12,140	1/1:1,14:15:42.12:634,42,0	1/1:1,6:7:15.05:246,15,0	1/1:1,16:17:48.16:783,48,0	1/1:2,21:23:63.17:996,63,0	1/1:0,5:6:15.05:246,15,0	0/0:11,0:11:33.10:0,33,384	0/0:9,0:9:24.07:0,24,279	1/1:1,11:12:23.97:394,24,0	1/1:1,9:10:27.09:443,27,0	1/1:1,19:20:51.17:837,51,0	1/1:2,8:10:11.67:188,12,0	1/1:0,24:25:75.21:1174,75,0	1/1:3,14:18:42.14:689,42,0	1/1:2,14:16:27.09:443,27,0	1/1:0,3:3:8.99:118,9,0	1/1:1,11:11:30.10:491,30,0	1/1:2,19:21:54.18:886,54,0	1/1:5,9:14:27.09:443,27,0	1/1:0,16:16:48.16:768,48,0	1/1:2,16:18:39.13:640,39,0	1/1:1,10:10:30.10:492,30,0
chr10	80974305	.	ATTTATTTTTT	A	14612.08	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=10.400;DP=302;FS=0.000;HRun=0;HaplotypeScore=105.0594;InbreedingCoeff=0.8639;MQ=64.65;MQ0=0;MQRankSum=-5.731;QD=65.53;ReadPosRankSum=1.338;VQSLOD=4.6865;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:33.11:0,33,1564	1/1:0,7:7:14.97:433,15,0	0/0:6,0:5:11.98:0,12,204	0/0:10,0:9:12.16:0,12,294	1/1:0,21:21:59.93:1558,60,0	0/0:22,0:22:66.21:0,66,3079	0/0:4,0:4:12.04:0,12,540	1/1:0,32:32:96.24:1822,96,0	0/0:9,0:9:27.09:0,27,1425	1/1:1,22:23:60.18:1727,60,0	1/1:0,17:17:38.94:1045,39,0	0/0:3,0:3:9.03:0,9,376	0/0:1,0:1:3.01:0,3,165	0/0:4,0:4:12.02:0,12,518	1/1:0,11:11:15.05:521,15,0	1/1:0,6:6:15.05:520,15,0	1/1:0,6:6:9.03:312,9,0	1/1:0,11:11:7.05:309,7,0	1/1:0,14:14:39.13:924,39,0	1/1:0,22:22:57.04:1610,57,0	1/1:0,3:3:3.01:104,3,0	0/0:2,0:2:6.02:0,6,330	0/0:2,0:2:6.01:0,6,192	0/0:5,0:5:15.05:0,15,572	1/1:0,11:11:15.05:521,15,0	1/1:0,14:14:39.13:1227,39,0	1/1:0,19:18:39.13:1353,39,0	1/1:0,6:6:18.06:626,18,0
chr10	80974444	.	AT	A	8001.42	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=11.834;DP=474;FS=12.120;HRun=7;HaplotypeScore=66.0710;InbreedingCoeff=0.9934;MQ=81.51;MQ0=0;MQRankSum=-2.638;QD=26.58;ReadPosRankSum=-0.299;VQSLOD=4.5478;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:63.12:0,63,755	1/1:0,4:4:12.03:122,12,0	0/0:14,0:14:36.08:0,36,422	0/0:14,0:14:36.05:0,36,397	1/1:4,18:22:54.12:551,54,0	0/0:23,0:23:69.22:0,69,865	0/0:7,0:7:21.07:0,21,264	1/1:2,34:36:99:1030,102,0	0/0:17,0:17:48.15:0,48,593	1/1:1,21:22:63.13:636,63,0	1/1:0,17:17:45.10:459,45,0	0/0:18,0:18:54.17:0,54,679	0/0:14,0:14:39.12:0,39,490	0/0:11,0:11:30.09:0,30,372	1/1:0,20:20:54.12:551,54,0	1/1:1,17:18:51.12:520,51,0	1/1:1,20:21:45.10:459,45,0	1/1:1,10:11:24.01:233,24,0	1/1:5,14:19:45.07:450,45,0	1/1:2,15:17:42.09:429,42,0	1/1:0,14:14:36.08:367,36,0	0/0:12,0:12:30.09:0,30,366	0/0:7,0:7:18.04:0,18,212	0/0:10,0:10:30.10:0,30,376	1/1:0,19:19:48.11:490,48,0	1/1:0,17:17:51.09:511,51,0	1/1:2,26:27:72.16:734,72,0	1/1:1,15:16:45.10:459,45,0
chr10	80974854	.	TTTC	T	4805.26	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=3.293;DP=631;FS=6.487;HRun=0;HaplotypeScore=116.4726;InbreedingCoeff=0.9991;MQ=82.13;MQ0=0;MQRankSum=-2.798;QD=38.44;ReadPosRankSum=2.027;VQSLOD=5.6728;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,2850	0/0:12,0:12:33.11:0,33,747	0/0:22,0:22:63.21:0,63,1346	0/0:21,0:21:47.93:0,48,1040	0/0:26,0:26:78.27:0,78,1755	1/1:4,23:27:60.20:999,60,0	0/0:15,0:15:42.14:0,42,952	0/0:28,0:28:81.28:0,81,1778	1/1:1,17:18:42.14:699,42,0	0/0:22,0:22:63.22:0,63,1398	0/0:13,0:13:36.12:0,36,815	1/1:1,21:22:54.14:869,54,0	0/0:23,0:23:69.22:0,69,1499	0/0:18,0:18:51.17:0,51,1130	0/0:25,0:25:69.24:0,69,1564	0/0:19,0:19:57.20:0,57,1251	0/0:26,0:26:78.24:0,78,1708	0/0:7,0:7:21.07:0,21,476	0/0:14,0:14:42.14:0,42,923	0/0:36,0:36:99:0,102,2281	0/0:39,0:39:99:0,111,2413	1/1:1,21:22:48.16:800,48,0	1/1:0,16:16:42.10:669,42,0	1/1:0,20:20:48.12:770,48,0	0/0:34,0:34:99:0,102,2257	0/0:25,0:25:69.23:0,69,1482	0/0:23,0:23:57.19:0,57,1279	0/0:15,0:15:42.14:0,42,951
chr10	80976630	.	TCACA	T	3642.92	PASS	AB=1.000;AC=41;AF=0.891;AN=46;BaseQRankSum=0.887;DP=322;FS=5.427;HRun=0;HaplotypeScore=67.5934;InbreedingCoeff=0.4184;MQ=68.17;MQ0=8;MQRankSum=0.591;QD=14.40;ReadPosRankSum=1.002;VQSLOD=2.7300;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:14:9.02:106,9,0	1/1:4,0:4:3.01:45,3,0	./.	./.	1/1:3,15:19:15.47:238,15,0	./.	0/0:8,0:8:12.02:0,12,215	0/1:26,0:23:18.85:137,0,19	./.	1/1:6,10:16:26.38:408,26,0	1/1:5,10:14:12.04:190,12,0	1/1:9,0:9:15.05:226,15,0	1/1:3,0:7:10.26:89,10,0	1/1:6,2:10:12.03:150,12,0	1/1:3,6:9:12.04:190,12,0	1/1:2,7:9:12.03:170,12,0	1/1:6,12:19:21.06:313,21,0	0/0:5,0:10:8.50:0,8,60	1/1:7,3:10:9.01:113,9,0	1/1:10,6:16:6.02:86,6,0	1/1:9,4:12:3.01:47,3,0	1/1:6,0:6:6.02:91,6,0	1/1:4,0:4:6.02:90,6,0	./.	1/1:4,4:8:3.01:47,3,0	1/1:5,11:16:33.09:479,33,0	1/1:8,10:18:18.06:285,18,0	1/1:0,4:4:9.03:142,9,0
chr10	80977375	.	G	GCACA	4341.37	PASS	AB=0.697;AC=34;AF=0.607;AN=56;BaseQRankSum=-2.250;DP=811;FS=10.067;HRun=0;HaplotypeScore=171.8598;InbreedingCoeff=0.1708;MQ=61.54;MQ0=23;MQRankSum=0.774;QD=7.66;ReadPosRankSum=-0.518;VQSLOD=3.4975;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:41:11.22:0,11,352	0/1:9,0:12:13.61:55,0,14	0/0:53,0:24:2.97:0,3,21	0/0:56,0:22:11.77:0,12,119	0/1:9,0:22:28.08:54,0,28	0/1:8,0:17:0.10:0,0,1	0/0:27,0:32:54.39:0,54,744	1/1:40,0:39:38.18:500,38,0	1/1:14,2:31:11.57:145,12,0	0/1:18,0:27:99:110,0,106	0/1:6,0:10:29:29,0,123	1/1:11,3:26:6.01:143,6,0	0/0:11,0:29:17.69:0,18,264	0/0:11,0:32:26.83:0,27,236	0/1:18,0:32:22.24:88,0,22	0/1:11,0:23:64.37:64,0,177	0/1:23,0:30:99:162,0,157	1/1:13,0:18:1.56:75,2,0	1/1:18,5:21:18.53:286,19,0	1/1:19,2:20:15.05:300,15,0	1/1:30,24:59:17.84:396,18,0	1/1:7,1:28:2.97:72,3,0	1/1:11,1:21:2.80:71,3,0	0/1:29,11:47:29.97:217,0,30	0/1:6,0:19:28.46:54,0,28	1/1:13,11:27:44.18:786,44,0	1/1:6,11:21:21.28:442,21,0	1/1:3,3:7:17.46:293,17,0
chr10	80985640	.	C	CA	10037.34	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.794;DP=474;FS=0.000;HRun=1;HaplotypeScore=35.6251;InbreedingCoeff=0.6765;MQ=46.74;MQ0=46;MQRankSum=-0.854;QD=24.24;ReadPosRankSum=1.279;VQSLOD=4.6425;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:14:30.10:437,30,0	1/1:0,7:6:15.05:224,15,0	0/0:33,0:5:11.70:0,12,116	0/1:37,0:9:24.26:24,0,148	1/1:1,22:22:36.08:503,36,0	1/1:1,12:12:30.10:447,30,0	0/0:27,0:24:54.12:0,54,676	1/1:6,2:2:6.02:89,6,0	1/1:0,16:15:33.11:477,33,0	1/1:2,19:16:48.16:718,48,0	1/1:1,16:16:30.04:438,30,0	1/1:4,11:14:33.11:492,33,0	1/1:3,15:16:39.13:565,39,0	1/1:0,14:14:30.10:447,30,0	1/1:2,15:14:33.11:481,33,0	1/1:3,13:14:27.09:395,27,0	1/1:2,18:17:42.14:609,42,0	1/1:2,6:7:12.04:171,12,0	1/1:12,2:2:6.02:90,6,0	1/1:0,13:13:30.10:438,30,0	1/1:10,11:12:27.09:404,27,0	1/1:0,14:11:21.07:312,21,0	1/1:1,16:15:24.08:358,24,0	1/1:1,9:10:21.07:313,21,0	1/1:1,14:13:24.08:359,24,0	1/1:1,12:13:36.12:533,36,0	1/1:3,15:13:30.10:443,30,0	1/1:5,8:8:18.06:269,18,0
chr10	80987204	.	AT	A	2114.78	PASS	AB=0.714;AC=11;AF=0.220;AN=50;BaseQRankSum=4.851;DP=671;FS=1.175;HRun=1;HaplotypeScore=37.8495;InbreedingCoeff=0.8645;MQ=29.44;MQ0=262;MQRankSum=0.592;QD=17.33;ReadPosRankSum=0.252;VQSLOD=3.6987;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:11:24.05:0,24,342	0/0:13,0:5:15.05:0,15,228	./.	./.	0/0:42,0:16:48.03:0,48,657	1/1:13,17:17:36.08:479,36,0	0/0:15,0:5:9.03:0,9,137	./.	1/1:6,10:10:24.04:313,24,0	0/0:29,0:16:45.12:0,45,644	0/0:26,0:15:39.06:0,39,549	1/1:8,9:8:21.07:293,21,0	0/0:18,0:14:39.08:0,39,568	0/0:21,0:17:48.16:0,48,731	0/0:27,0:20:57.19:0,57,852	0/0:23,0:13:39.05:0,39,514	0/0:32,0:11:27.02:0,27,384	0/0:29,0:12:30.10:0,30,458	0/0:36,0:12:36.12:0,36,551	0/0:41,0:14:33.06:0,33,477	0/0:24,0:17:48.16:0,48,731	1/1:6,12:12:33.07:438,33,0	1/1:6,15:15:33.11:460,33,0	0/1:12,8:10:57.31:305,0,57	0/0:29,0:9:24.08:0,24,365	0/0:34,0:19:56.78:0,57,834	0/0:35,0:18:51.17:0,51,750	0/0:16,0:9:21.07:0,21,321
chr10	80988364	.	TA	T	675.10	PASS	AB=0.875;AC=17;AF=0.315;AN=54;BaseQRankSum=-3.071;DP=236;FS=1.918;HRun=10;HaplotypeScore=40.9390;InbreedingCoeff=0.6212;MQ=55.93;MQ0=4;MQRankSum=-0.139;QD=8.88;ReadPosRankSum=-0.739;VQSLOD=1.1935;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,3:14:10.97:199,11,0	0/0:3,0:3:8.68:0,9,47	0/0:12,0:3:7.26:0,7,66	0/0:13,0:3:8.33:0,8,55	0/0:13,0:13:11.81:0,12,140	1/1:0,7:7:12:104,12,0	0/0:1,0:1:3.01:0,3,33	0/1:22,1:22:0.01:0,0,199	0/1:2,2:4:6.37:43,0,6	0/0:15,0:15:37.32:0,37,202	0/1:5,0:5:9.39:9,0,46	1/1:0,7:7:18:156,18,0	1/1:4,2:6:17.80:130,18,0	./.	0/0:5,0:5:8.63:0,9,45	0/0:4,0:4:11.75:0,12,76	0/0:24,0:24:23.02:0,23,304	0/0:4,0:4:2.21:0,2,27	0/0:7,0:7:10.87:0,11,68	0/0:11,0:11:20.34:0,20,114	0/0:4,0:4:8.79:0,9,52	1/1:0,1:1:3:26,3,0	1/1:0,3:3:9:78,9,0	1/1:1,4:5:12.88:106,13,0	0/0:8,0:8:17.25:0,17,91	0/0:8,0:8:19.68:0,20,118	0/0:15,0:14:17.11:0,17,219	0/0:12,0:12:24.93:0,25,143
chr10	80988376	.	T	TA	414.49	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=0.943;DP=242;FS=12.991;HRun=9;HaplotypeScore=41.4468;InbreedingCoeff=0.6948;MQ=61.57;MQ0=1;MQRankSum=-0.249;QD=20.72;ReadPosRankSum=0.082;VQSLOD=2.9627;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,3:14:13.93:356,14,0	0/0:3,0:3:9:0,9,78	0/0:14,0:6:13.54:0,14,107	0/0:8,0:4:8.94:0,9,69	0/0:15,0:15:44.97:0,45,387	0/0:7,0:7:12:0,12,104	0/0:1,0:1:3:0,3,26	0/0:25,0:24:65.97:0,66,569	0/0:5,0:5:15:0,15,130	0/0:15,0:15:35.98:0,36,312	0/0:5,0:5:15:0,15,130	0/0:7,0:7:15:0,15,130	1/1:4,2:6:18.01:172,18,0	./.	0/0:8,0:8:21:0,21,182	0/0:8,0:8:24:0,24,208	0/0:20,0:20:53.99:0,54,469	0/0:5,0:5:12:0,12,104	0/0:7,0:7:17.99:0,18,155	0/0:7,0:7:21:0,21,182	0/0:4,0:4:12:0,12,104	0/0:1,0:1:3:0,3,26	0/0:4,0:4:12:0,12,104	0/0:5,0:5:12:0,12,104	0/0:8,0:8:11.99:0,12,104	0/0:11,0:11:23.99:0,24,208	0/0:16,0:15:47.99:0,48,417	0/0:13,0:13:38.99:0,39,339
chr10	80988510	.	TTTAG	T	719.72	PASS	AB=0.977;AC=22;AF=0.500;AN=44;BaseQRankSum=6.641;DP=370;FS=5.798;HRun=0;HaplotypeScore=114.9403;InbreedingCoeff=0.5390;MQ=59.92;MQ0=3;MQRankSum=-3.657;QD=3.27;ReadPosRankSum=-0.443;VQSLOD=1.9271;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:7.57:0,8,58	./.	0/0:12,0:9:20.22:0,20,259	./.	0/1:15,0:15:0:0,0,1	0/1:18,2:20:72.83:73,0,233	0/0:6,0:6:17.98:0,18,314	0/1:36,0:35:0.01:0,0,0	0/0:13,0:13:15.04:0,15,262	1/1:17,0:16:14.46:104,14,0	1/1:15,0:15:2.91:28,3,0	0/0:15,0:15:27.09:0,27,533	0/0:7,0:7:2.98:0,3,22	./.	./.	1/1:16,0:16:5.98:56,6,0	1/1:16,0:15:6.01:56,6,0	./.	0/1:14,0:13:7.86:74,0,8	1/1:11,0:11:3:28,3,0	1/1:5,0:5:2.22:7,2,0	0/0:13,0:13:15.05:0,15,275	0/0:14,0:14:24.08:0,24,463	1/1:5,4:9:9.03:136,9,0	0/0:12,0:12:2.97:0,3,20	1/1:21,0:21:13.17:108,13,0	1/1:25,0:25:16.89:203,17,0	./.
chr10	80988554	.	GATAGATAGATAGATA	G	3183.17	PASS	AB=1.000;AC=21;AF=0.389;AN=54;BaseQRankSum=0.264;DP=412;FS=3.145;HRun=0;HaplotypeScore=180.1701;InbreedingCoeff=0.4711;MQ=53.05;MQ0=10;MQRankSum=0.050;QD=14.60;ReadPosRankSum=-0.927;VQSLOD=2.6382;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:24.98:0,25,634	./.	0/0:9,0:5:13.59:0,14,171	0/0:4,0:2:6.02:0,6,65	0/0:1,13:14:2.83:0,3,4	0/0:12,0:12:27.09:0,27,1233	0/0:8,0:8:21.03:0,21,613	1/1:30,0:25:26.80:615,27,0	0/1:21,0:21:0.77:1,0,1031	0/1:24,0:23:99:622,0,220	1/1:9,0:9:2.24:31,2,0	0/0:22,0:22:48.14:0,48,2142	0/0:12,0:12:15.01:0,15,701	0/0:18,0:16:10.39:0,10,199	0/0:24,0:23:9.02:0,9,113	0/1:15,0:15:36.90:54,0,37	1/1:15,0:15:6.02:66,6,0	0/1:15,0:15:22.40:205,0,22	0/1:18,0:16:68.69:389,0,69	1/1:11,0:11:2.69:31,3,0	1/1:9,0:9:20.78:264,21,0	0/0:11,0:11:27.09:0,27,688	0/0:12,0:11:33.11:0,33,1387	0/0:13,0:13:24.55:0,25,701	0/0:12,0:12:3.01:0,3,45	1/1:19,0:19:6.78:510,7,0	1/1:27,0:27:24.07:346,24,0	1/1:5,0:5:15.05:229,15,0
chr10	80988558	.	GATAGATAGATA	G	5810.17	PASS	AC=24;AF=0.462;AN=52;BaseQRankSum=0.754;DP=414;FS=0.507;HRun=0;HaplotypeScore=155.1066;InbreedingCoeff=0.7628;MQ=53.38;MQ0=9;MQRankSum=1.682;QD=29.34;ReadPosRankSum=-0.105;VQSLOD=4.1442;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:23.31:0,23,459	./.	0/0:9,0:6:16.60:0,17,213	0/0:4,0:2:6.02:0,6,65	0/0:14,0:14:1.32:0,1,3	0/0:13,0:13:27.09:0,27,889	0/0:10,0:10:27.05:0,27,593	1/1:30,0:25:46.17:769,46,0	0/0:21,0:21:2.22:0,2,883	1/1:24,0:23:33.78:769,34,0	1/1:1,8:9:2.24:102,2,0	0/0:23,0:23:48.16:0,48,1742	0/0:11,0:11:15.01:0,15,525	0/0:18,0:16:9.50:0,10,148	./.	1/1:2,13:15:6.02:205,6,0	1/1:2,11:13:6.02:205,6,0	1/1:16,0:16:0.71:253,1,0	1/1:3,16:17:48.13:906,48,0	1/1:0,12:12:2.07:102,2,0	1/1:10,0:10:24.08:402,24,0	0/0:10,0:10:24.08:0,24,574	0/0:12,0:11:30.10:0,30,1032	0/0:13,0:13:24.55:0,25,471	0/0:11,1:12:2.97:0,3,20	1/1:1,18:19:54.18:1082,54,0	1/1:1,25:26:24.08:786,24,0	1/1:5,0:5:15.05:229,15,0
chr10	80988562	.	GATAGATA	G	5343.78	PASS	AB=1.000;AC=25;AF=0.500;AN=50;BaseQRankSum=0.542;DP=404;FS=2.355;HRun=0;HaplotypeScore=135.2308;InbreedingCoeff=0.7168;MQ=55.26;MQ0=8;MQRankSum=0.241;QD=25.57;ReadPosRankSum=-0.513;VQSLOD=4.7090;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:16.66:17,0,318	./.	0/0:13,0:9:25.90:0,26,340	0/0:4,0:2:6.02:0,6,65	0/0:13,0:13:1.33:0,1,2	0/0:12,0:12:26.99:0,27,519	0/0:10,0:10:30.02:0,30,495	1/1:23,0:19:57.19:871,57,0	0/0:22,0:22:2.19:0,2,740	1/1:1,24:24:72.25:1223,72,0	1/1:9,0:9:2.77:57,3,0	0/0:22,0:22:48.12:0,48,1282	0/0:12,0:12:15.01:0,15,357	0/0:17,0:15:9.50:0,10,127	./.	1/1:15,0:15:6.02:114,6,0	1/1:12,0:12:6.02:114,6,0	1/1:13,0:13:2.06:256,2,0	1/1:19,0:17:45.15:703,45,0	1/1:12,0:12:2.45:57,2,0	1/1:11,0:11:27.09:402,27,0	0/0:9,0:9:18.06:0,18,377	0/0:12,0:11:24.08:0,24,687	0/0:11,0:11:24.48:0,24,297	./.	1/1:18,0:18:53.92:814,54,0	1/1:26,0:26:24.08:442,24,0	1/1:6,0:6:18.06:275,18,0
chr10	80988569	.	A	AG	4382.92	PASS	AB=0.938;AC=26;AF=0.520;AN=50;BaseQRankSum=-0.742;DP=406;FS=3.117;HRun=0;HaplotypeScore=114.4594;InbreedingCoeff=0.7116;MQ=59.51;MQ0=2;MQRankSum=0.626;QD=19.57;ReadPosRankSum=-0.091;VQSLOD=6.3172;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,3:21:73.46:73,0,167	./.	0/0:15,0:11:31.35:0,31,417	0/0:6,0:4:9.03:0,9,105	0/1:14,0:14:0.66:1,0,1	0/0:11,0:11:27.01:0,27,320	0/0:10,0:10:30.01:0,30,375	1/1:1,28:29:84.28:1224,84,0	0/0:22,1:23:7.13:0,7,583	1/1:24,0:24:67.61:932,68,0	1/1:9,0:9:0.28:2,0,0	0/0:22,0:22:51.13:0,51,690	0/0:12,1:13:14.99:0,15,170	0/0:17,1:16:11.51:0,12,145	./.	1/1:13,0:13:0.94:3,1,0	1/1:11,0:11:0.94:3,1,0	1/1:1,12:13:5.98:290,6,0	1/1:16,0:16:38.24:526,38,0	1/1:12,0:12:0.47:2,0,0	1/1:1,11:12:27.07:374,27,0	0/0:7,0:7:18.06:0,18,252	0/0:10,0:9:24.08:0,24,335	0/0:12,0:12:27.04:0,27,324	./.	1/1:18,0:18:46.51:640,47,0	1/1:26,0:26:7.14:48,7,0	1/1:0,6:6:18.06:264,18,0
chr10	80988603	.	AATGTATGTATGTATGT	A	958.26	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=3.632;DP=486;FS=0.000;HRun=0;HaplotypeScore=224.0512;InbreedingCoeff=0.7849;MQ=59.41;MQ0=6;MQRankSum=-4.782;QD=14.52;ReadPosRankSum=1.813;VQSLOD=2.5047;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,11:20:6.02:265,6,0	0/0:2,0:2:3.01:0,3,229	0/1:14,0:6:0:0,0,0	./.	0/0:15,0:15:22.19:0,22,1253	0/0:12,0:12:18.06:0,18,1227	0/0:14,0:14:30.09:0,30,1856	0/0:42,0:41:51.16:0,51,2703	0/0:28,0:28:54.15:0,54,2887	0/0:31,0:31:75.23:0,75,5074	0/0:15,0:15:24.07:0,24,1530	0/0:18,0:18:33.11:0,33,1892	1/1:7,8:15:9.03:397,9,0	1/1:4,13:17:12.01:418,12,0	0/0:21,0:21:21.07:0,21,1422	0/0:18,0:18:24.08:0,24,1802	0/0:7,0:7:6.02:0,6,456	0/0:19,0:19:33.11:0,33,2244	0/0:22,0:20:27.09:0,27,2058	0/0:15,0:15:30.10:0,30,1888	0/0:25,0:25:59.69:0,60,4091	0/0:8,0:8:24.08:0,24,1440	0/0:7,0:7:15.05:0,15,990	0/0:18,0:18:36.12:0,36,2076	0/0:16,0:16:21.07:0,21,1600	0/0:25,0:25:57.20:0,57,4266	0/0:20,0:20:15.05:0,15,1120	0/0:13,0:13:36.12:0,36,2361
chr10	80991524	.	G	GA	4299.72	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-13.661;DP=578;FS=0.379;HRun=7;HaplotypeScore=55.6045;InbreedingCoeff=0.9902;MQ=80.95;MQ0=0;MQRankSum=-1.337;QD=31.85;ReadPosRankSum=3.402;VQSLOD=4.5131;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.01:0,45,423	0/0:15,0:15:42.05:0,42,399	0/0:21,0:21:44.59:0,45,395	0/0:11,0:11:26.24:0,26,233	0/0:35,0:35:90.13:0,90,869	1/1:1,25:25:75.23:906,75,0	0/0:7,0:7:15.02:0,15,145	0/0:36,0:36:93.13:0,93,894	1/1:2,23:26:69.08:812,69,0	0/0:29,0:29:75.10:0,75,719	0/0:12,0:12:33.05:0,33,319	1/1:1,19:20:51.16:616,51,0	0/0:16,0:16:45.01:0,45,423	0/0:17,0:17:48.06:0,48,458	0/0:26,0:26:78.13:0,78,753	0/0:23,0:23:66.10:0,66,637	0/0:19,0:19:42.52:0,43,405	0/0:5,0:5:12.02:0,12,116	0/0:17,0:17:45.03:0,45,426	0/0:29,0:29:72.09:0,72,689	0/0:13,0:13:39.06:0,39,377	1/1:1,22:23:60.14:708,60,0	1/1:3,23:26:69.20:823,69,0	1/1:1,13:14:36.11:435,36,0	0/0:18,0:18:48.05:0,48,453	0/0:29,0:29:84.12:0,84,806	0/0:31,0:31:87.11:0,87,828	0/0:18,0:18:48.08:0,48,464
chr10	80991714	.	GT	G	9940.43	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=2.656;DP=543;FS=14.352;HRun=9;HaplotypeScore=64.0343;InbreedingCoeff=0.9614;MQ=73.14;MQ0=0;MQRankSum=-3.768;QD=21.94;ReadPosRankSum=2.224;VQSLOD=4.4994;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:17.99:0,18,237	1/1:1,8:9:24.01:220,24,0	0/0:25,0:24:50.02:0,50,564	0/0:14,0:14:5.14:0,5,192	1/1:2,22:24:57.01:522,57,0	1/1:0,26:26:66.04:604,66,0	0/0:11,0:11:27.07:0,27,302	1/1:4,33:37:96:863,96,0	1/1:1,21:22:51.03:467,51,0	1/1:3,26:29:78.01:707,78,0	1/1:2,28:30:81.04:740,81,0	1/1:2,10:12:24.01:220,24,0	0/0:12,0:12:33.10:0,33,381	0/0:19,0:20:47.95:0,48,522	1/1:3,11:14:27.01:247,27,0	1/1:3,23:26:63.03:577,63,0	1/1:0,5:5:12.01:110,12,0	1/1:2,12:14:39.01:356,39,0	1/1:5,18:23:22.49:454,22,0	1/1:4,38:42:99:932,102,0	1/1:1,11:12:30.02:275,30,0	1/1:2,14:16:36.01:329,36,0	1/1:1,30:31:74.81:678,75,0	1/1:1,13:14:30.01:275,30,0	1/1:3,15:18:42.02:384,42,0	1/1:2,11:13:32.99:296,33,0	1/1:3,23:26:60.02:549,60,0	1/1:2,8:10:15.01:137,15,0
chr10	80999078	.	C	CA	312.15	PASS	AC=6;AF=0.75;AN=8;BaseQRankSum=-1.826;DP=26;FS=10.414;HRun=0;HaplotypeScore=27.5612;MQ=123.07;MQ0=12;MQRankSum=-1.611;QD=18.36;ReadPosRankSum=-0.967;VQSLOD=4.3204;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	1/1:2,0:2:5.39:23,5,0	0/0:4,0:4:6.02:0,6,69	./.	./.	./.	1/1:3,1:1:3.01:46,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:4,7:7:21.07:319,21,0	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	81004338	.	G	GA	5782.49	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-14.649;DP=629;FS=7.831;HRun=8;HaplotypeScore=57.3829;InbreedingCoeff=0.9979;MQ=82.11;MQ0=0;MQRankSum=-0.722;QD=28.21;ReadPosRankSum=2.666;VQSLOD=5.3879;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:51.11:574,51,0	0/0:6,0:6:18.01:0,18,165	0/0:22,0:22:54.01:0,54,494	0/0:13,0:13:25.83:0,26,225	0/0:21,0:21:54.03:0,54,494	1/1:5,26:31:78.23:900,78,0	0/0:21,0:21:57.03:0,57,521	0/0:39,0:39:96.03:0,96,873	1/1:1,26:27:63.19:727,63,0	0/0:31,0:31:80.99:0,81,729	0/0:27,0:27:75.03:0,75,686	1/1:1,18:19:48.14:554,48,0	1/1:3,17:20:60.15:670,60,0	1/1:2,12:14:33.10:378,33,0	0/0:18,0:18:39:0,39,357	0/0:31,0:31:87.01:0,87,787	0/0:19,0:19:57.03:0,57,522	0/0:12,0:12:23.84:0,24,219	0/0:26,0:26:72.02:0,72,654	0/0:30,0:30:84.04:0,84,769	0/0:17,0:17:42.01:0,42,384	1/1:4,18:22:51.15:588,51,0	1/1:2,23:25:35.57:665,36,0	1/1:4,23:27:63.19:727,63,0	0/0:25,0:25:63.03:0,63,576	0/0:22,0:22:57.02:0,57,521	0/0:33,0:33:96.05:0,96,879	0/0:11,0:11:27.01:0,27,247
chr10	81005248	.	GGTGTGTGTGT	G	1024.88	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=3.019;DP=641;FS=15.741;HRun=0;HaplotypeScore=187.9908;InbreedingCoeff=0.8687;MQ=67.73;MQ0=21;MQRankSum=-5.741;QD=13.14;ReadPosRankSum=1.172;VQSLOD=1.8996;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,10:33:13.15:286,13,0	0/0:4,0:10:16.09:0,16,498	./.	./.	0/0:22,0:23:24.08:0,24,913	0/0:20,0:22:18.06:0,18,708	0/0:13,0:16:11.21:0,11,143	0/0:27,0:25:18.93:0,19,496	0/0:25,0:26:24.49:0,24,866	0/0:13,0:19:30.10:0,30,1195	0/0:9,0:13:6.02:0,6,269	0/0:22,0:22:36.12:0,36,1473	1/1:15,8:23:18.06:534,18,0	1/1:15,5:21:12.04:337,12,0	0/0:15,0:23:19.48:0,19,768	0/0:17,0:24:23.09:0,23,955	0/0:14,0:24:24.06:0,24,850	0/0:16,0:16:29.10:0,29,1039	0/0:10,0:10:13.60:0,14,517	0/0:11,0:22:9.50:0,10,376	0/0:27,0:44:24.03:0,24,736	0/0:17,0:17:30.10:0,30,1088	0/0:20,0:22:39.13:0,39,1624	0/0:24,0:25:36.11:0,36,1357	0/0:11,0:21:18.53:0,19,790	0/0:20,0:29:51.17:0,51,1957	0/0:19,0:19:26.74:0,27,955	0/0:10,0:9:9.03:0,9,404
chr10	81007042	.	C	CA	2838.24	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.784;DP=611;FS=6.164;HRun=2;HaplotypeScore=57.0016;InbreedingCoeff=0.9983;MQ=78.20;MQ0=0;MQRankSum=-5.023;QD=35.93;ReadPosRankSum=2.016;VQSLOD=4.2227;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:63.21:907,63,0	0/0:9,0:9:24.07:0,24,298	0/0:24,0:22:50.98:0,51,613	0/0:15,0:15:40.94:0,41,445	0/0:21,0:21:60.19:0,60,744	0/0:40,0:40:99:0,120,1449	0/0:18,0:18:54.17:0,54,668	0/0:29,0:29:78.24:0,78,967	0/0:19,0:19:57.18:0,57,707	0/0:28,0:28:81.25:0,81,995	0/0:31,0:31:90.26:0,90,1101	0/0:17,0:17:45.14:0,45,558	1/1:1,24:25:63.21:908,63,0	1/1:1,31:32:81.27:1167,81,0	0/0:28,0:28:78.23:0,78,955	0/0:17,0:17:51.16:0,51,632	0/0:21,0:21:63.20:0,63,781	0/0:11,0:11:30.09:0,30,372	0/0:15,0:15:45.13:0,45,546	0/0:26,0:26:75.24:0,75,930	0/0:15,0:15:45.12:0,45,544	0/0:23,0:23:69.20:0,69,842	0/0:22,0:22:66.19:0,66,805	0/0:19,0:19:54.17:0,54,669	0/0:28,0:28:84.24:0,84,1018	0/0:23,0:23:66.21:0,66,818	0/0:24,0:24:69.22:0,69,855	0/0:8,0:8:24.08:0,24,297
chr10	81007170	.	GA	G	2831.74	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=10.035;DP=561;FS=2.340;HRun=8;HaplotypeScore=95.9823;InbreedingCoeff=0.9924;MQ=76.56;MQ0=0;MQRankSum=-1.451;QD=22.12;ReadPosRankSum=2.206;VQSLOD=3.9201;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.19:0,63,761	0/0:7,0:7:21.06:0,21,254	0/0:15,0:15:33.08:0,33,385	0/0:10,1:11:13.50:0,13,163	0/0:30,0:30:84.26:0,84,1014	1/1:3,28:31:72.11:695,72,0	0/0:14,0:14:39.10:0,39,450	0/0:27,0:27:72.19:0,72,847	1/1:1,13:15:38.09:353,38,0	0/0:27,0:27:75.22:0,75,898	0/0:31,0:31:72.21:0,72,858	1/1:2,22:24:60.09:579,60,0	0/0:14,0:14:39.11:0,39,458	0/0:24,0:24:60.18:0,60,725	0/0:18,0:18:48.14:0,48,570	0/0:28,0:28:78.22:0,78,930	0/0:32,0:32:89.85:0,90,1050	0/0:8,0:8:18.06:0,18,217	0/0:17,0:17:42.11:0,42,485	0/0:26,0:26:72.22:0,72,867	0/0:16,0:16:42.13:0,42,507	1/1:3,20:23:51.07:492,51,0	1/1:3,24:27:69.10:666,69,0	1/1:0,8:8:24.04:232,24,0	0/0:24,0:24:66.20:0,66,797	0/0:18,0:18:48.11:0,48,548	0/0:22,0:21:57.17:0,57,689	./.
chr10	81007578	.	A	ATTTTT	17743.50	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-2.924;DP=429;FS=21.747;HRun=9;HaplotypeScore=88.4145;InbreedingCoeff=0.8184;MQ=79.74;MQ0=0;MQRankSum=-7.055;QD=45.85;ReadPosRankSum=0.332;VQSLOD=1.8549;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,3:20:33.11:693,33,0	1/1:1,3:6:18.06:443,18,0	0/0:16,0:16:0.36:0,0,411	0/0:16,0:16:20.76:0,21,346	1/1:4,10:14:27.09:710,27,0	1/1:2,3:14:30.10:639,30,0	0/0:9,0:10:21.02:0,21,319	1/1:21,10:35:63.20:1517,63,0	1/1:4,11:19:42.14:1006,42,0	1/1:4,6:15:27.08:586,27,0	1/1:7,10:17:30.10:843,30,0	1/1:5,10:16:21.07:572,21,0	1/1:4,1:17:36.12:835,36,0	1/1:8,1:22:24.08:592,24,0	1/1:6,8:17:33.11:851,33,0	1/1:7,9:16:30.10:795,30,0	1/1:7,10:18:27.09:681,27,0	1/1:1,1:2:3.01:85,3,0	1/1:10,9:21:45.14:1020,45,0	1/1:3,9:16:39.10:917,39,0	1/1:6,6:12:12.02:271,12,0	1/1:1,6:11:30.10:679,30,0	1/1:2,3:8:15.05:377,15,0	1/1:6,10:17:36.09:923,36,0	1/1:3,11:15:27.09:724,27,0	1/1:5,8:14:29.46:688,29,0	1/1:2,5:10:21.07:549,21,0	1/1:6,7:15:27.08:748,27,0
chr10	81007689	.	T	TAC	5803.39	PASS	AB=0.750;AC=31;AF=0.554;AN=56;BaseQRankSum=-2.880;DP=374;FS=3.287;HRun=0;HaplotypeScore=91.2929;InbreedingCoeff=0.6254;MQ=53.93;MQ0=9;MQRankSum=-2.980;QD=23.78;ReadPosRankSum=0.821;VQSLOD=5.5198;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:9:11.87:0,12,109	1/1:2,9:11:27.09:405,27,0	0/1:24,0:7:1.92:2,0,35	0/0:21,0:4:3.01:0,3,33	1/1:8,14:22:24.60:350,25,0	0/0:17,0:17:32.96:0,33,328	0/0:8,0:8:15.04:0,15,176	1/1:17,11:27:42.09:610,42,0	0/0:13,0:13:17.97:0,18,172	1/1:3,11:14:36.11:545,36,0	0/1:6,5:11:20.12:174,0,20	0/0:14,0:14:29.71:0,30,323	0/0:7,0:7:11.99:0,12,125	0/0:12,0:13:17.84:0,18,174	1/1:4,4:9:18.05:223,18,0	1/1:1,7:9:24.08:366,24,0	1/1:7,11:17:39.13:586,39,0	1/1:1,3:4:9.03:141,9,0	1/1:5,1:6:6.02:92,6,0	0/1:5,10:15:1.15:352,0,1	1/1:4,4:8:6.02:94,6,0	0/0:13,0:13:27:0,27,286	0/0:14,0:15:26.90:0,27,275	0/1:6,1:7:38.15:38,0,61	1/1:7,14:21:51.12:681,51,0	0/1:3,7:10:11.08:306,0,11	1/1:7,15:22:48.16:701,48,0	1/1:0,0:5:15:136,15,0
chr10	81007728	.	CTA	C	4267.62	PASS	AB=0.767;AC=40;AF=0.833;AN=48;BaseQRankSum=-0.556;DP=260;FS=0.000;HRun=0;HaplotypeScore=97.2885;InbreedingCoeff=0.4975;MQ=78.53;MQ0=2;MQRankSum=-1.291;QD=19.49;ReadPosRankSum=1.819;VQSLOD=4.7625;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,3:4:3.01:43,3,0	0/1:16,0:10:19.12:19,0,105	0/0:29,0:16:6.45:0,6,103	1/1:2,14:16:12.01:170,12,0	1/1:0,15:16:15.01:215,15,0	0/0:3,0:3:9.03:0,9,158	1/1:7,34:38:99:1421,102,0	1/1:1,7:8:9.03:129,9,0	1/1:1,7:8:21.07:300,21,0	1/1:2,4:6:6.02:84,6,0	1/1:3,5:10:18.05:238,18,0	0/0:3,0:3:5.99:0,6,49	./.	0/1:1,7:8:0:0,0,0	1/1:0,4:4:9.03:128,9,0	1/1:5,7:12:12.51:165,13,0	1/1:5,2:7:7.66:102,8,0	1/1:1,6:7:15.05:210,15,0	./.	1/1:0,2:2:6.02:86,6,0	1/1:0,3:3:3.01:43,3,0	1/1:1,7:8:9.03:129,9,0	./.	1/1:2,12:14:6.02:85,6,0	1/1:3,5:8:18.05:240,18,0	1/1:4,11:15:23.99:317,24,0	1/1:1,5:6:12.02:145,12,0
chr10	81007779	.	TATATATATATACACAC	T	3025.66	PASS	AB=0.839;AC=24;AF=0.706;AN=34;BaseQRankSum=-0.149;DP=152;FS=1.428;HRun=0;HaplotypeScore=87.9157;InbreedingCoeff=0.2806;MQ=37.69;MQ0=1;MQRankSum=-1.682;QD=26.31;ReadPosRankSum=2.055;VQSLOD=1.5779;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,1:3:3.01:143,3,0	0/0:3,0:1:3.01:0,3,62	0/0:2,0:2:6.02:0,6,101	0/1:12,0:12:0:0,0,0	1/1:4,0:4:3.01:77,3,0	./.	1/1:31,0:28:61.90:982,62,0	./.	1/1:2,7:8:14.85:242,15,0	0/1:0,4:4:0:0,0,0	1/1:6,0:6:3.01:76,3,0	0/0:1,0:1:3.01:0,3,51	./.	./.	./.	1/1:11,0:10:1.87:331,2,0	0/1:5,0:5:98.44:165,0,98	1/1:2,8:10:12.83:255,13,0	./.	1/1:2,0:2:2.98:22,3,0	./.	./.	./.	./.	0/1:5,1:6:3.74:253,0,4	1/1:5,2:6:6.49:216,6,0	1/1:4,1:4:9.03:371,9,0
chr10	81007785	.	TATATACACAC	T	2339.67	PASS	AB=0.950;AC=20;AF=0.588;AN=34;BaseQRankSum=2.401;DP=151;FS=7.378;HRun=0;HaplotypeScore=77.5872;InbreedingCoeff=0.3165;MQ=44.75;MQ0=1;MQRankSum=-1.948;QD=22.72;ReadPosRankSum=3.742;VQSLOD=1.1732;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,0:3:3.01:85,3,0	0/0:6,0:4:12.04:0,12,312	0/0:3,0:3:8.92:0,9,117	0/1:12,0:12:0:0,0,0	1/1:4,0:4:3.01:51,3,0	0/0:1,0:1:3.01:0,3,75	1/1:26,0:24:38.86:774,39,0	./.	1/1:9,0:8:12.03:197,12,0	./.	1/1:6,0:6:3.01:52,3,0	0/0:1,0:1:3.01:0,3,51	./.	./.	./.	1/1:5,6:10:11.96:284,12,0	0/1:3,1:4:65.82:142,0,66	0/1:10,0:10:14.64:233,0,15	./.	0/0:1,0:1:2.98:0,3,21	./.	./.	./.	./.	0/1:7,0:7:3.85:232,0,4	1/1:6,0:6:6.02:138,6,0	1/1:2,3:4:9.03:276,9,0
chr10	81007787	.	TATACACAC	T	2095.21	PASS	AB=1.000;AC=20;AF=0.625;AN=32;BaseQRankSum=3.503;DP=146;FS=6.538;HRun=0;HaplotypeScore=71.7103;InbreedingCoeff=0.3091;MQ=52.81;MQ0=1;MQRankSum=-1.605;QD=21.60;ReadPosRankSum=4.388;VQSLOD=1.3048;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,0:3:3.01:67,3,0	0/0:7,0:5:15.05:0,15,418	0/0:5,0:5:14.94:0,15,261	0/1:10,0:10:0.01:0,0,0	1/1:4,0:4:3.01:45,3,0	0/0:1,0:1:3.01:0,3,75	0/1:22,0:21:4.85:773,0,5	./.	1/1:8,0:7:12.03:165,12,0	./.	1/1:7,0:7:3.01:45,3,0	0/0:1,0:1:3.01:0,3,51	./.	./.	./.	1/1:9,1:9:12.04:211,12,0	0/1:4,0:4:55.93:108,0,56	0/1:10,0:10:14.93:233,0,15	./.	./.	./.	./.	./.	./.	1/1:7,0:7:15.05:274,15,0	1/1:7,0:7:5.97:109,6,0	1/1:5,0:4:9.03:185,9,0
chr10	81007789	.	TACACAC	T	2086.25	PASS	AB=0.650;AC=22;AF=0.688;AN=32;BaseQRankSum=3.551;DP=149;FS=13.022;HRun=0;HaplotypeScore=70.7721;InbreedingCoeff=0.5283;MQ=56.39;MQ0=1;MQRankSum=-3.517;QD=22.93;ReadPosRankSum=3.926;VQSLOD=1.9492;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,5:6:2.99:53,3,0	0/0:8,0:6:18.06:0,18,525	0/0:5,0:5:14.94:0,15,261	0/1:0,10:10:0:0,0,0	1/1:2,1:4:3.01:37,3,0	0/0:1,0:1:3.01:0,3,75	1/1:1,17:18:45.14:849,45,0	./.	1/1:7,0:7:12.03:166,12,0	./.	1/1:2,5:7:3.01:38,3,0	0/0:4,0:4:6.02:0,6,123	./.	./.	./.	1/1:8,0:7:12.04:163,12,0	0/1:2,1:4:53.95:95,0,54	1/1:8,0:8:17.07:256,17,0	./.	./.	./.	./.	./.	./.	1/1:1,6:7:18.05:285,18,0	1/1:2,5:7:6.02:122,6,0	1/1:5,0:4:9.03:146,9,0
chr10	81008040	.	AGT	A	4408.57	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.191;DP=585;FS=0.841;HRun=0;HaplotypeScore=99.7707;InbreedingCoeff=0.9991;MQ=87.86;MQ0=0;MQRankSum=-3.993;QD=40.82;ReadPosRankSum=3.773;VQSLOD=6.6925;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,2544	0/0:8,0:8:24.08:0,24,483	0/0:21,0:21:63.17:0,63,1156	0/0:24,0:24:71.36:0,71,1179	0/0:19,0:19:54.19:0,54,1090	1/1:1,28:29:84.28:1237,84,0	0/0:24,0:24:72.21:0,72,1363	0/0:31,0:31:93.31:0,93,1835	1/1:1,16:17:48.16:707,48,0	0/0:20,0:20:60.21:0,60,1195	0/0:13,0:13:33.11:0,33,668	1/1:0,16:16:45.15:663,45,0	0/0:25,0:25:75.23:0,75,1449	0/0:26,0:26:75.26:0,75,1508	0/0:33,0:33:99:0,99,2011	0/0:27,0:27:81.28:0,81,1622	0/0:24,0:24:72.25:0,72,1459	0/0:9,0:9:27.09:0,27,526	0/0:15,0:15:45.15:0,45,912	0/0:23,0:23:69.22:0,69,1357	0/0:27,0:27:81.26:0,81,1609	1/1:0,13:13:39.13:569,39,0	1/1:1,11:12:33.11:483,33,0	1/1:0,21:21:51.17:751,51,0	0/0:16,0:16:48.16:0,48,974	0/0:23,0:23:69.24:0,69,1392	0/0:17,0:17:51.18:0,51,1034	0/0:10,0:10:30.10:0,30,609
chr10	81008719	.	A	AT	17344.07	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-6.893;DP=665;FS=8.272;HRun=3;HaplotypeScore=67.6339;InbreedingCoeff=0.9973;MQ=79.47;MQ0=0;MQRankSum=-1.120;QD=38.54;ReadPosRankSum=-0.236;VQSLOD=4.7469;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:48.12:650,48,0	1/1:0,5:5:15.05:210,15,0	0/0:13,0:13:39.01:0,39,434	0/0:18,0:18:45.14:0,45,545	1/1:3,22:25:63.17:860,63,0	0/0:31,0:31:90.28:0,90,1080	0/0:19,0:19:54.16:0,54,647	1/1:0,34:34:99:1412,102,0	0/0:27,0:27:78.24:0,78,936	1/1:0,24:24:72.24:1008,72,0	1/1:1,32:33:96.28:1322,96,0	0/0:20,0:20:60.18:0,60,720	1/1:2,25:27:69.23:961,69,0	1/1:3,25:28:75.25:1050,75,0	1/1:4,26:30:78.26:1092,78,0	1/1:2,24:26:66.22:924,66,0	1/1:1,19:20:51.17:714,51,0	1/1:0,11:11:33.07:440,33,0	1/1:3,10:13:30.10:420,30,0	1/1:1,37:38:99:1532,111,0	1/1:0,21:21:60.20:840,60,0	0/0:26,0:26:78.22:0,78,923	0/0:33,0:33:96.29:0,96,1151	0/0:28,0:28:84.26:0,84,1007	1/1:2,24:26:72.24:1008,72,0	1/1:2,32:34:96.32:1345,96,0	1/1:0,26:26:78.26:1092,78,0	1/1:0,11:11:33.11:462,33,0
chr10	81009043	.	A	ATT	16667.06	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-11.055;DP=516;FS=12.205;HRun=7;HaplotypeScore=53.0314;InbreedingCoeff=0.9429;MQ=77.03;MQ0=1;MQRankSum=-1.840;QD=39.59;ReadPosRankSum=1.513;VQSLOD=3.3853;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:48.13:0,48,559	1/1:1,5:7:18.02:266,18,0	0/0:7,0:7:2.24:0,2,63	0/0:19,0:19:47.33:0,47,526	1/1:4,22:26:66.16:1012,66,0	1/1:2,21:23:60.20:985,60,0	0/0:22,0:22:66.20:0,66,769	1/1:2,34:36:99:1590,102,0	1/1:0,18:18:45.15:739,45,0	1/1:3,25:28:75.24:1207,75,0	1/1:0,28:29:86.70:1328,87,0	1/1:2,7:10:18.06:295,18,0	0/0:16,0:16:48.14:0,48,559	0/0:11,0:11:33.09:0,33,374	1/1:5,16:21:42.14:689,42,0	1/1:0,13:13:33.11:542,33,0	1/1:2,12:14:33.11:541,33,0	1/1:1,19:22:53.66:825,54,0	1/1:5,22:26:63.02:904,63,0	1/1:5,20:25:60.20:953,60,0	1/1:0,15:16:23.89:530,24,0	1/1:1,9:10:27.01:384,27,0	1/1:3,17:20:51.17:837,51,0	1/1:0,7:7:21.07:345,21,0	1/1:2,17:21:42.14:689,42,0	1/1:0,20:21:60.19:961,60,0	1/1:2,20:23:56.68:895,57,0	1/1:0,3:3:9.03:148,9,0
chr10	81009201	.	TTA	T	8904.80	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=9.545;DP=424;FS=7.495;HRun=0;HaplotypeScore=55.7402;InbreedingCoeff=0.9102;MQ=80.05;MQ0=2;MQRankSum=-0.738;QD=30.60;ReadPosRankSum=0.088;VQSLOD=6.1484;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:63.21:0,63,1052	1/1:2,3:5:9.03:117,9,0	0/0:12,0:11:12.02:0,12,123	0/0:21,0:14:11.46:0,11,136	1/1:0,23:23:63.20:820,63,0	0/0:16,0:16:48.16:0,48,817	0/0:7,0:7:18.06:0,18,306	1/1:7,28:35:84.26:1077,84,0	0/0:10,0:10:30.10:0,30,510	1/1:3,20:23:57.18:741,57,0	1/1:2,18:20:45.10:566,45,0	0/0:9,0:9:24.08:0,24,408	0/0:16,0:16:48.16:0,48,806	0/0:6,0:6:15.05:0,15,255	1/1:2,12:14:27.09:351,27,0	1/1:0,11:11:30.10:390,30,0	1/1:0,12:12:36.12:465,36,0	1/1:3,17:19:47.64:593,48,0	1/1:4,10:14:27.09:350,27,0	1/1:2,23:25:60.15:757,60,0	1/1:3,4:7:12.04:156,12,0	0/0:1,0:1:3.01:0,3,51	0/0:6,0:6:6.02:0,6,102	0/0:2,0:2:3.01:0,3,51	1/1:4,26:30:72.23:937,72,0	1/1:1,13:14:36.10:453,36,0	1/1:1,26:27:57.19:741,57,0	1/1:1,10:11:30.10:390,30,0
chr10	81010256	.	C	CA	4659.79	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=6.702;DP=529;FS=7.076;HRun=7;HaplotypeScore=56.3202;InbreedingCoeff=0.9280;MQ=77.92;MQ0=0;MQRankSum=-2.250;QD=27.74;ReadPosRankSum=2.337;VQSLOD=5.6078;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:66.20:797,66,0	0/0:13,0:13:33:0,33,308	0/0:12,0:12:30.04:0,30,286	0/1:10,0:10:8.44:8,0,178	0/0:30,0:30:81.09:0,81,771	1/1:5,19:24:54.17:652,54,0	0/0:7,0:7:18.03:0,18,174	0/0:37,0:37:93.11:0,93,889	1/1:2,14:16:48.15:577,48,0	0/0:23,0:23:63.10:0,63,608	0/0:26,0:26:66.10:0,66,637	1/1:0,21:21:51.63:617,52,0	1/1:3,14:17:39.12:471,39,0	1/1:7,16:23:48.13:558,48,0	0/0:14,0:14:36.06:0,36,347	0/0:16,0:16:42.06:0,42,406	0/0:29,0:29:87.14:0,87,840	0/0:13,0:13:39.06:0,39,377	0/0:14,0:14:36.05:0,36,347	0/0:33,0:33:93.15:0,93,898	0/0:17,0:17:51.08:0,51,492	1/1:0,8:8:24.07:290,24,0	1/1:1,11:12:33.10:399,33,0	1/1:1,8:9:24.07:289,24,0	0/0:23,0:23:63.10:0,63,608	0/0:24,0:24:72.12:0,72,695	0/0:19,0:19:54.09:0,54,521	0/0:11,0:11:33.05:0,33,319
chr10	81010439	.	AG	A	7672.41	PASS	AC=30;AF=0.556;AN=54;BaseQRankSum=10.363;DP=499;FS=0.000;HRun=7;HaplotypeScore=56.8124;InbreedingCoeff=0.9886;MQ=85.77;MQ0=0;MQRankSum=-2.782;QD=25.92;ReadPosRankSum=2.149;VQSLOD=5.3496;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.17:0,54,679	1/1:1,8:9:24.05:245,24,0	0/0:20,0:20:33.75:0,34,541	0/0:14,0:14:13.28:0,13,211	1/1:3,22:25:60.13:608,60,0	0/0:23,1:24:41.65:0,42,837	0/0:15,0:15:45.14:0,45,565	1/1:9,26:35:75.15:758,75,0	0/0:15,0:15:39.11:0,39,478	1/1:3,26:29:78.15:782,78,0	1/1:1,19:20:54.12:551,54,0	0/0:10,0:10:30.09:0,30,366	0/0:16,0:16:42.13:0,42,522	0/0:22,0:22:60.17:0,60,725	1/1:2,15:17:39.09:398,39,0	1/1:1,17:18:48.11:490,48,0	1/1:1,11:12:33.07:337,33,0	1/1:0,7:7:18.04:184,18,0	1/1:0,18:18:54.12:551,54,0	1/1:3,20:23:28.41:605,28,0	1/1:0,14:14:42.10:429,42,0	0/0:12,0:12:36.12:0,36,453	0/0:17,0:17:42.12:0,42,515	0/0:16,0:16:45.14:0,45,566	1/1:0,25:25:60.14:612,60,0	1/1:4,15:19:10.36:421,10,0	1/1:1,24:25:69.15:703,69,0	./.
chr10	81012134	.	AG	A	2048.72	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.053;DP=611;FS=1.657;HRun=3;HaplotypeScore=65.4080;InbreedingCoeff=0.9993;MQ=88.37;MQ0=0;MQRankSum=-3.590;QD=33.04;ReadPosRankSum=2.363;VQSLOD=4.2253;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:42.13:520,42,0	0/0:12,0:12:33.11:0,33,474	0/0:21,0:21:59.98:0,60,820	0/0:23,0:23:54.21:0,54,846	0/0:23,0:23:66.20:0,66,912	0/0:26,0:26:72.24:0,72,1037	0/0:20,0:20:60.20:0,60,863	0/0:30,0:30:87.29:0,87,1250	0/0:22,0:22:66.22:0,66,950	0/0:34,0:34:99:0,99,1375	0/0:29,0:29:78.24:0,78,1087	0/0:31,0:31:93.31:0,93,1325	1/1:1,22:23:69.22:853,69,0	1/1:1,23:24:66.21:818,66,0	0/0:25,0:25:75.25:0,75,1078	0/0:18,0:18:54.18:0,54,778	0/0:9,0:9:27.09:0,27,389	0/0:12,0:12:36.12:0,36,518	0/0:21,0:21:57.19:0,57,819	0/0:28,0:28:81.27:0,81,1166	0/0:20,0:20:60.20:0,60,857	0/0:18,0:18:54.18:0,54,777	0/0:15,0:15:42.14:0,42,602	0/0:17,0:17:51.17:0,51,719	0/0:26,0:26:72.24:0,72,1036	0/0:31,0:31:93.31:0,93,1339	0/0:28,0:28:81.27:0,81,1165	0/0:10,0:10:30.10:0,30,431
chr10	81012261	.	CA	C	13380.55	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=11.071;DP=627;FS=4.291;HRun=1;HaplotypeScore=81.9540;InbreedingCoeff=0.9964;MQ=83.60;MQ0=0;MQRankSum=-4.366;QD=39.24;ReadPosRankSum=1.286;VQSLOD=5.5197;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.24:0,69,1093	1/1:0,8:8:21.07:294,21,0	0/0:17,0:17:47.88:0,48,705	0/0:20,0:20:60.12:0,60,900	1/1:0,21:21:51.17:713,51,0	0/0:34,0:34:99:0,99,1556	0/0:18,0:18:54.18:0,54,845	1/1:0,29:29:87.23:1161,87,0	0/0:25,0:25:75.24:0,75,1169	1/1:0,39:39:99:1635,117,0	1/1:0,21:21:60.20:839,60,0	0/0:26,0:26:78.27:0,78,1243	0/0:27,0:27:81.28:0,81,1291	0/0:18,0:18:54.18:0,54,858	1/1:0,22:22:66.22:923,66,0	1/1:0,30:30:87.29:1217,87,0	1/1:0,20:20:48.16:671,48,0	1/1:0,5:5:15.05:210,15,0	1/1:0,19:19:57.15:760,57,0	1/1:0,30:30:87.29:1216,87,0	1/1:0,22:22:63.21:881,63,0	0/0:26,0:26:75.24:0,75,1176	0/0:24,0:24:72.25:0,72,1151	0/0:28,0:28:84.28:0,84,1314	1/1:0,17:17:48.16:671,48,0	1/1:1,23:24:24.23:890,24,0	1/1:0,27:27:72.24:1007,72,0	1/1:0,7:7:21.07:294,21,0
chr10	81012388	.	A	ATTT	18637.79	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=5.621;DP=635;FS=7.258;HRun=7;HaplotypeScore=148.1938;InbreedingCoeff=0.9845;MQ=77.74;MQ0=1;MQRankSum=-6.835;QD=32.02;ReadPosRankSum=5.936;VQSLOD=2.1079;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:30:77.68:600,78,0	1/1:3,8:12:24.03:454,24,0	0/0:18,0:18:34.10:0,34,547	0/0:15,0:15:27.44:0,27,342	1/1:5,20:26:60.08:1073,60,0	1/1:4,0:32:29.90:67,30,0	0/0:20,0:20:54.01:0,54,665	1/1:5,31:36:93.28:1813,93,0	1/1:1,0:20:22.07:50,22,0	1/1:2,30:34:96.33:1939,96,0	1/1:4,34:39:99:2098,105,0	1/1:3,0:23:23.67:53,24,0	1/1:1,0:24:62.76:487,63,0	1/1:0,0:21:50.81:394,51,0	1/1:7,17:24:33.11:684,33,0	1/1:4,16:21:48.16:975,48,0	1/1:2,16:19:39.09:766,39,0	1/1:1,5:6:15.01:268,15,0	1/1:3,11:15:39.12:733,39,0	1/1:3,29:34:92.31:1748,92,0	1/1:2,12:16:36.06:665,36,0	1/1:2,0:23:22.43:51,22,0	1/1:1,0:23:26.16:59,26,0	1/1:3,0:21:21.18:48,21,0	1/1:2,21:23:51.17:1010,51,0	1/1:7,19:26:57.15:1062,57,0	1/1:1,24:25:60.21:1244,60,0	1/1:2,6:7:17.09:296,17,0
chr10	81012535	.	C	CTT	10885.93	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=8.737;DP=539;FS=12.668;HRun=8;HaplotypeScore=119.1178;InbreedingCoeff=0.9540;MQ=68.47;MQ0=0;MQRankSum=-3.184;QD=23.01;ReadPosRankSum=4.824;VQSLOD=2.6328;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:45:49.41:241,49,0	1/1:1,9:11:27.09:409,27,0	0/0:19,0:15:36.09:0,36,400	0/0:24,0:16:35.98:0,36,381	1/1:6,12:17:33.07:496,33,0	1/1:6,0:22:7.04:110,7,0	0/0:21,0:21:54.10:0,54,584	1/1:14,22:36:63.18:946,63,0	1/1:1,0:16:32.44:112,32,0	1/1:8,18:27:59.69:905,60,0	1/1:3,15:18:45.15:705,45,0	1/1:1,1:10:22.97:117,23,0	1/1:3,0:15:24.50:84,24,0	1/1:3,0:15:22.93:88,23,0	1/1:4,12:17:33.07:496,33,0	1/1:1,12:12:33.11:524,33,0	1/1:3,23:26:66.18:1014,66,0	1/1:2,8:11:27.09:409,27,0	1/1:7,9:17:33.07:477,33,0	1/1:6,12:18:39.12:598,39,0	1/1:4,18:22:48.11:733,48,0	1/1:3,0:13:12.48:43,12,0	1/1:1,0:15:32.44:112,32,0	1/1:2,0:19:37.43:129,37,0	1/1:4,16:20:42.10:639,42,0	1/1:3,13:18:47.11:642,47,0	1/1:6,16:22:36.59:572,37,0	1/1:1,8:9:18.06:286,18,0
chr10	81013676	.	C	CT	1801.16	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-9.186;DP=498;FS=4.548;HRun=10;HaplotypeScore=54.7212;InbreedingCoeff=0.9593;MQ=71.99;MQ0=0;MQRankSum=0.389;QD=19.37;ReadPosRankSum=1.602;VQSLOD=4.7135;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:29.95:0,30,246	0/0:6,0:7:17.01:0,17,129	0/0:16,0:15:29.85:0,30,259	0/0:7,0:7:14.97:0,15,122	0/0:32,0:32:68.87:0,69,566	1/1:3,18:21:51.13:544,51,0	0/0:9,0:9:23.97:0,24,197	0/0:24,0:24:53.91:0,54,440	1/1:1,12:13:11.45:327,11,0	0/0:21,0:21:50.91:0,51,419	0/0:21,1:23:23.86:0,24,382	1/1:4,14:18:5.47:262,5,0	0/0:20,0:21:58.93:0,59,469	0/0:23,0:23:59.89:0,60,489	0/0:27,1:28:36.93:0,37,510	0/0:14,0:14:41.95:0,42,345	0/0:7,0:7:20.98:0,21,172	0/0:8,0:8:20.98:0,21,172	0/0:24,0:24:53.89:0,54,442	0/0:32,0:32:83.66:0,84,674	0/0:11,0:11:29.96:0,30,246	1/1:1,13:14:24.33:273,24,0	1/1:2,14:16:33.08:352,33,0	1/1:1,10:11:21.05:224,21,0	0/0:25,0:25:65.89:0,66,539	0/0:17,0:17:38.93:0,39,320	0/0:28,0:28:76.82:0,77,607	0/0:13,0:13:32.96:0,33,271
chr10	81015221	.	A	AT	12248.93	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-6.762;DP=609;FS=6.191;HRun=8;HaplotypeScore=62.2979;InbreedingCoeff=0.9930;MQ=75.68;MQ0=0;MQRankSum=0.338;QD=28.16;ReadPosRankSum=1.907;VQSLOD=5.4902;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:26:41.70:719,42,0	1/1:0,7:7:15.04:173,15,0	0/0:12,0:12:17.21:0,17,142	0/0:10,0:10:17.12:0,17,109	1/1:5,22:27:66.15:745,66,0	0/0:26,0:25:69:0,69,621	0/0:21,0:21:57.03:0,57,521	1/1:6,25:31:75.17:832,75,0	0/0:23,0:23:69.04:0,69,630	1/1:2,30:32:90.27:1039,90,0	1/1:3,24:27:44.75:769,45,0	0/0:12,0:12:33.02:0,33,302	1/1:2,17:19:51.15:587,51,0	1/1:1,21:22:54.16:623,54,0	1/1:3,18:21:48.61:555,49,0	1/1:1,15:16:39.12:450,39,0	1/1:3,19:22:54.11:608,54,0	1/1:3,21:24:60.18:692,60,0	1/1:6,17:23:51.15:587,51,0	1/1:4,37:41:99:1181,104,0	1/1:2,12:14:30.09:346,30,0	0/0:22,0:22:57.02:0,57,521	0/0:22,0:22:59.16:0,59,547	0/0:26,0:26:53.99:0,54,486	1/1:3,18:21:54.16:623,54,0	1/1:7,21:28:63.17:716,63,0	1/1:1,26:28:69.20:796,69,0	1/1:0,6:6:18.05:208,18,0
chr10	81016336	.	C	CG	14551.42	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-7.270;DP=618;FS=0.000;HRun=3;HaplotypeScore=64.6345;InbreedingCoeff=0.9958;MQ=92.41;MQ0=0;MQRankSum=-6.314;QD=34.00;ReadPosRankSum=2.316;VQSLOD=5.3605;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:98.89:846,99,0	1/1:0,8:8:18.06:252,18,0	0/0:31,0:31:60.76:0,61,906	0/0:22,0:23:42.96:0,43,641	1/1:3,36:39:99:1383,102,0	0/0:16,0:16:48.15:0,48,575	0/0:29,0:29:81.24:0,81,960	1/1:4,31:34:93.25:1226,93,0	0/0:21,2:23:15.22:0,15,606	1/1:1,23:24:69.23:965,69,0	1/1:0,21:21:57.19:795,57,0	0/0:11,0:11:33.10:0,33,396	1/1:34,0:34:86.89:751,87,0	1/1:13,0:13:38.95:331,39,0	1/1:0,27:27:69.23:966,69,0	1/1:1,23:24:60.20:840,60,0	1/1:0,19:19:48.16:672,48,0	1/1:0,10:10:24.08:336,24,0	1/1:1,15:16:45.15:625,45,0	1/1:1,29:30:87.24:1182,87,0	1/1:1,11:12:33.11:462,33,0	0/0:13,0:13:39.12:0,39,468	0/0:19,0:19:51.16:0,51,612	0/0:25,0:25:69.17:0,69,812	1/1:1,15:16:40.38:549,40,0	1/1:1,19:20:57.19:794,57,0	1/1:4,28:33:87.29:1213,87,0	1/1:2,8:10:29.72:363,30,0
chr10	81016337	.	G	GC	8088.72	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=9.910;DP=623;FS=1.019;HRun=1;HaplotypeScore=88.3763;InbreedingCoeff=0.9733;MQ=92.74;MQ0=0;MQRankSum=-4.922;QD=18.72;ReadPosRankSum=4.604;VQSLOD=5.2670;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,35:36:99:1580,99,0	1/1:9,0:9:17.42:99,17,0	0/0:31,0:31:60.84:0,61,1130	0/0:24,0:24:54.34:0,54,783	1/1:39,0:39:51.54:511,52,0	0/0:17,0:17:48.16:0,48,671	0/0:29,0:29:87.26:0,87,1178	1/1:36,0:35:27.65:336,28,0	0/0:22,0:22:48.08:0,48,789	1/1:25,0:25:39.67:310,40,0	1/1:21,0:21:55.05:308,55,0	0/0:12,0:12:33.11:0,33,461	1/1:1,36:37:87.30:1387,87,0	1/1:0,13:13:39.13:623,39,0	1/1:27,0:27:66.15:346,66,0	1/1:24,0:24:33.89:281,34,0	1/1:19,0:19:46.22:248,46,0	1/1:10,0:10:6.58:128,7,0	1/1:16,0:16:19.54:212,20,0	1/1:29,0:30:81.97:471,82,0	1/1:12,0:12:8.88:142,9,0	0/0:13,0:13:39.13:0,39,542	0/0:19,0:19:54.17:0,54,738	0/0:24,0:24:69.23:0,69,960	1/1:16,0:16:30.16:192,30,0	1/1:20,0:20:54.48:284,54,0	1/1:32,0:32:46.08:471,46,0	1/1:10,0:10:28.94:161,29,0
chr10	81017918	.	CA	C	5729.08	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=5.823;DP=368;FS=1.116;HRun=9;HaplotypeScore=41.0998;InbreedingCoeff=0.9677;MQ=72.71;MQ0=0;MQRankSum=-2.893;QD=21.78;ReadPosRankSum=2.323;VQSLOD=5.3388;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,15:19:22.30:362,22,0	1/1:0,5:5:12.01:110,12,0	0/0:21,0:15:14.41:0,14,175	0/0:15,0:14:23.81:0,24,201	1/1:2,17:19:51.03:467,51,0	0/0:16,0:16:48.14:0,48,551	0/0:11,0:11:27.08:0,27,312	1/1:7,33:40:96.01:871,96,0	0/0:15,0:15:39.10:0,39,440	1/1:3,5:8:15.01:137,15,0	1/1:1,23:24:60.01:549,60,0	0/0:9,0:9:18.04:0,18,198	1/1:2,8:10:17.90:165,18,0	1/1:2,7:9:21.01:192,21,0	1/1:1,13:14:36.02:329,36,0	1/1:1,9:10:27.01:247,27,0	1/1:0,11:11:30.02:275,30,0	1/1:1,7:8:21:192,21,0	1/1:4,19:23:54.01:490,54,0	1/1:2,12:14:33:301,33,0	1/1:1,9:10:24.01:220,24,0	0/0:4,0:4:9.03:0,9,104	0/0:8,0:8:21.05:0,21,234	0/0:6,0:6:12.04:0,12,139	1/1:1,9:10:24.01:220,24,0	1/1:2,8:10:24.01:220,24,0	1/1:4,8:12:21.01:192,21,0	1/1:0,7:7:21.01:192,21,0
chr10	81018052	.	GTTAT	G	798.68	PASS	AC=8;AF=0.182;AN=44;BaseQRankSum=-2.700;DP=228;FS=7.123;HRun=0;HaplotypeScore=48.4854;InbreedingCoeff=0.5301;MQ=67.29;MQ0=0;MQRankSum=4.189;QD=24.20;ReadPosRankSum=1.832;VQSLOD=2.0923;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:15.01:0,15,221	0/0:3,0:3:3.01:0,3,46	./.	./.	0/0:2,0:2:2.97:0,3,20	1/1:3,15:18:33.11:525,33,0	0/0:5,0:5:6.02:0,6,142	0/0:45,0:46:54.12:0,54,789	1/1:0,6:6:15.05:239,15,0	0/0:9,0:9:12.04:0,12,210	./.	./.	0/0:7,0:7:3.01:0,3,56	0/0:5,0:5:6.02:0,6,72	0/0:7,0:7:6.02:0,6,109	0/0:5,0:5:3:0,3,27	0/0:13,0:13:12.03:0,12,171	0/0:5,0:5:3.01:0,3,47	0/0:18,0:18:15.05:0,15,293	0/0:5,0:5:3.01:0,3,42	0/0:5,0:5:6.02:0,6,122	./.	1/1:6,0:6:5.99:70,6,0	1/1:0,3:3:6.02:95,6,0	0/0:6,0:6:9.03:0,9,152	0/0:6,0:6:3.01:0,3,51	0/0:13,0:12:14.99:0,15,222	./.
chr10	81018088	.	TA	T	353.48	PASS	AB=0.767;AC=11;AF=0.220;AN=50;BaseQRankSum=0.923;DP=203;FS=3.933;HRun=1;HaplotypeScore=56.6050;InbreedingCoeff=0.0216;MQ=73.56;MQ0=0;MQRankSum=-3.204;QD=5.61;ReadPosRankSum=-1.103;VQSLOD=0.2605;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:34.67:38,0,35	0/1:1,1:2:7.93:16,0,8	0/0:22,1:12:32.70:0,33,465	0/0:22,0:14:32.69:0,33,418	0/0:2,0:2:2.74:0,3,12	0/0:17,0:17:39.05:0,39,400	0/0:6,0:6:18.05:0,18,264	0/1:18,4:21:99:135,0,299	0/0:10,0:10:27.06:0,27,331	1/1:0,4:4:10.26:93,10,0	./.	0/0:5,0:5:15.05:0,15,240	0/1:3,1:4:16.33:16,0,22	0/0:4,0:4:11.02:0,11,48	0/1:3,1:4:13.56:23,0,14	./.	0/1:3,2:5:17.44:72,0,17	0/1:4,1:5:27.25:27,0,64	0/0:10,0:10:28.11:0,28,253	0/0:2,0:2:5.74:0,6,36	0/0:3,0:3:5.23:0,5,54	0/0:4,0:4:12.04:0,12,181	0/0:9,0:9:27.09:0,27,412	0/0:15,0:15:28.42:0,28,557	0/1:1,3:4:1.76:48,0,2	0/1:1,1:2:7.01:28,0,7	0/0:6,0:5:11.77:0,12,95	./.
chr10	81018090	.	TTGTA	T	2449.14	PASS	AB=0.714;AC=31;AF=0.620;AN=50;BaseQRankSum=5.139;DP=201;FS=30.012;HRun=0;HaplotypeScore=58.9083;InbreedingCoeff=0.7431;MQ=73.61;MQ0=0;MQRankSum=-8.145;QD=29.16;ReadPosRankSum=2.678;VQSLOD=1.6943;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:18.05:281,18,0	1/1:2,0:2:6.02:97,6,0	0/0:25,0:13:36.97:0,37,736	0/0:23,0:16:14.84:0,15,729	1/1:1,0:1:3.01:49,3,0	0/0:17,0:17:42.11:0,42,841	0/0:6,0:6:18.05:0,18,420	1/1:17,2:18:26.66:539,27,0	0/0:10,0:10:27.09:0,27,642	1/1:4,0:4:9:79,9,0	./.	0/0:5,0:5:15.05:0,15,405	1/1:4,0:4:11.96:166,12,0	1/1:4,0:4:12.04:196,12,0	1/1:4,0:4:6.02:99,6,0	./.	1/1:4,0:4:11.78:155,12,0	0/1:3,2:5:31.54:145,0,32	1/1:10,0:10:27.06:378,27,0	1/1:2,0:2:6.02:97,6,0	1/1:3,0:3:6:79,6,0	0/0:4,0:4:12.02:0,12,265	0/0:9,0:9:27.05:0,27,651	0/0:15,0:15:42.12:0,42,1008	1/1:4,0:4:9:119,9,0	1/1:2,0:2:5.38:58,5,0	1/1:5,0:4:6.02:104,6,0	./.
chr10	81018092	.	GTA	G	1355.98	PASS	AB=0.833;AC=31;AF=0.620;AN=50;BaseQRankSum=6.355;DP=206;FS=32.457;HRun=0;HaplotypeScore=56.4812;InbreedingCoeff=0.7383;MQ=74.90;MQ0=2;MQRankSum=-7.991;QD=16.74;ReadPosRankSum=2.847;VQSLOD=1.8482;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,4:10:16.22:146,16,0	1/1:1,1:2:6.01:59,6,0	0/0:28,1:14:39.02:0,39,584	0/0:26,0:17:24.39:0,24,603	1/1:0,1:1:3.01:30,3,0	0/0:17,0:17:42.11:0,42,738	0/0:6,0:6:18.05:0,18,305	1/1:17,2:18:26.40:304,26,0	0/0:10,0:10:27.09:0,27,519	1/1:4,0:4:8.23:62,8,0	./.	0/0:6,0:6:18.06:0,18,338	1/1:1,3:4:9.49:94,9,0	1/1:0,4:4:12.02:121,12,0	1/1:1,2:3:6.01:61,6,0	./.	1/1:3,1:4:11.73:97,12,0	0/1:4,1:5:13.05:54,0,13	1/1:4,6:10:27.04:268,27,0	1/1:0,2:2:6.01:59,6,0	1/1:3,0:3:5.94:42,6,0	0/0:4,0:4:12.02:0,12,197	0/0:9,0:9:13.68:0,14,449	0/0:16,0:16:45.14:0,45,794	1/1:3,1:4:7.57:64,8,0	1/1:1,1:2:5.38:39,5,0	1/1:3,1:3:5.96:49,6,0	./.
chr10	81018105	.	TGTTGC	T	2814.71	PASS	AB=0.833;AC=31;AF=0.620;AN=50;BaseQRankSum=7.115;DP=231;FS=31.730;HRun=0;HaplotypeScore=68.0959;InbreedingCoeff=0.7359;MQ=74.41;MQ0=5;MQRankSum=-8.075;QD=31.27;ReadPosRankSum=0.789;VQSLOD=1.4962;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,4:14:19.55:381,20,0	1/1:2,1:3:8.99:128,9,0	0/0:37,0:20:50.04:0,50,1034	0/0:30,0:22:56.62:0,57,1276	1/1:0,1:1:3.01:54,3,0	0/0:13,0:13:36.12:0,36,1063	0/0:7,0:7:21.06:0,21,557	1/1:13,2:15:39.06:495,39,0	0/0:13,0:13:36.12:0,36,1053	1/1:2,0:2:2.90:34,3,0	./.	0/0:9,0:9:27.09:0,27,853	1/1:5,3:7:21.06:293,21,0	1/1:5,4:8:24.07:344,24,0	1/1:0,2:2:6.02:109,6,0	./.	1/1:5,1:6:14.83:183,15,0	0/1:4,1:5:20.33:148,0,20	1/1:5,5:10:27.06:402,27,0	1/1:0,2:2:6.02:108,6,0	1/1:5,0:5:5.93:44,6,0	0/0:4,0:4:9.03:0,9,299	0/0:11,0:11:18.74:0,19,915	0/0:16,0:16:45.15:0,45,1400	1/1:2,1:3:9.03:141,9,0	1/1:0,1:1:3.01:55,3,0	1/1:3,1:3:6.02:84,6,0	./.
chr10	81018106	.	GT	G	664.57	PASS	AB=0.892;AC=27;AF=0.540;AN=50;BaseQRankSum=7.704;DP=232;FS=26.604;HRun=2;HaplotypeScore=59.9759;InbreedingCoeff=0.4708;MQ=74.26;MQ0=5;MQRankSum=-7.121;QD=7.38;ReadPosRankSum=1.751;VQSLOD=-0.6726;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,3:14:2.86:121,3,0	1/1:3,0:3:5.47:25,5,0	0/0:38,0:20:18.21:0,18,610	0/0:30,0:22:35.56:0,36,668	1/1:1,0:1:2.68:11,3,0	0/0:13,0:13:33.11:0,33,495	0/0:6,0:6:18.06:0,18,260	0/1:15,0:15:68.59:69,0,81	0/0:13,0:13:36.12:0,36,514	1/1:2,0:2:2.99:24,3,0	./.	0/0:9,0:9:27.09:0,27,399	1/1:8,0:7:20.58:165,21,0	1/1:9,0:8:23.12:184,23,0	1/1:2,0:2:5.36:22,5,0	./.	0/1:7,0:7:9.35:9,0,12	0/1:4,1:5:12.33:31,0,12	1/1:10,0:10:18.49:81,18,0	1/1:2,0:2:5.27:21,5,0	0/1:2,3:5:6.54:12,0,7	0/0:4,0:4:9.03:0,9,135	0/0:11,0:11:31.66:0,32,448	0/0:17,0:17:48.15:0,48,692	1/1:3,0:3:8.50:47,9,0	1/1:1,0:1:2.68:11,3,0	0/1:3,0:2:5.24:5,0,12	./.
chr10	81018107	.	TTGC	T	2593.07	PASS	AC=32;AF=0.640;AN=50;BaseQRankSum=8.595;DP=227;FS=30.362;HRun=0;HaplotypeScore=59.9325;InbreedingCoeff=0.8102;MQ=74.93;MQ0=5;MQRankSum=-6.873;QD=29.81;ReadPosRankSum=-0.470;VQSLOD=1.7744;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:29.96:407,30,0	1/1:1,2:3:8.99:109,9,0	0/0:37,0:21:24.67:0,25,671	0/0:29,0:22:35.85:0,36,834	1/1:1,0:1:3.01:43,3,0	0/0:13,0:13:33.08:0,33,669	0/0:6,0:6:18.06:0,18,405	1/1:8,7:15:38.64:411,39,0	0/0:13,0:13:36.07:0,36,746	1/1:0,1:1:3.01:51,3,0	./.	0/0:9,0:9:27.09:0,27,615	1/1:3,5:7:21.07:332,21,0	1/1:4,4:8:24.08:372,24,0	1/1:2,0:2:6.02:87,6,0	./.	1/1:4,3:7:13.51:124,14,0	1/1:4,0:4:11.95:133,12,0	1/1:6,4:10:27.04:333,27,0	1/1:2,0:2:6.02:85,6,0	1/1:5,0:5:5.95:53,6,0	0/0:4,0:4:9.03:0,9,206	0/0:11,0:11:33.08:0,33,666	0/0:17,0:17:45.15:0,45,1012	1/1:1,2:3:9.03:139,9,0	1/1:1,0:1:3.01:44,3,0	1/1:3,0:2:5.98:63,6,0	./.
chr10	81018252	.	G	GTCATCATCA	6254.53	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-4.550;DP=421;FS=68.250;HRun=0;HaplotypeScore=113.9589;InbreedingCoeff=0.8511;MQ=52.96;MQ0=10;MQRankSum=-8.647;QD=37.91;ReadPosRankSum=1.904;VQSLOD=1.7613;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:87.28:0,87,2104	1/1:1,7:8:18.06:822,18,0	0/0:17,0:14:23.94:0,24,326	0/0:17,0:9:6.02:0,6,93	1/1:5,6:11:12.04:457,12,0	0/0:18,0:18:29.15:0,29,987	0/0:27,0:27:45.14:0,45,1074	1/1:16,0:16:9.03:180,9,0	0/0:32,0:31:69.64:0,70,1565	1/1:5,6:10:6.02:275,6,0	1/1:2,1:9:9.03:311,9,0	0/0:11,0:11:30.05:0,30,653	0/0:19,0:20:39.02:0,39,701	0/0:21,0:20:45.14:0,45,951	1/1:3,12:17:9.03:412,9,0	1/1:3,8:14:9.03:410,9,0	1/1:4,0:4:6.02:193,6,0	1/1:9,0:9:14.98:293,15,0	1/1:7,1:6:12.04:361,12,0	1/1:1,8:10:6.02:273,6,0	1/1:10,0:10:14.59:429,15,0	0/0:4,0:4:9.03:0,9,230	0/0:14,0:14:30.01:0,30,560	0/0:24,0:26:51.17:0,51,1290	1/1:4,9:13:24.08:1016,24,0	1/1:6,5:11:9.03:206,9,0	1/1:3,8:12:12.04:549,12,0	1/1:1,0:1:3.01:68,3,0
chr10	81018633	.	GT	G	3809.80	PASS	AB=0.984;AC=29;AF=0.518;AN=56;BaseQRankSum=-6.162;DP=726;FS=1.834;HRun=3;HaplotypeScore=161.0220;InbreedingCoeff=0.7799;MQ=70.63;MQ0=2;MQRankSum=3.845;QD=8.66;ReadPosRankSum=-4.874;VQSLOD=-0.6337;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:35,1:36:6.78:7,0,284	0/0:8,0:8:1.89:0,2,3	0/0:32,0:26:78.16:0,78,1008	0/0:29,0:24:63.07:0,63,775	1/1:30,0:30:26.72:320,27,0	0/0:26,0:26:78.25:0,78,1089	0/0:19,0:19:57.19:0,57,811	1/1:32,0:30:64.74:769,65,0	0/0:28,0:28:81.23:0,81,1118	1/1:20,0:20:44.31:560,44,0	1/1:25,1:26:31.93:337,32,0	0/0:28,0:28:82.52:0,83,1166	0/0:19,0:19:22.54:0,23,154	0/0:28,1:28:35.07:0,35,288	0/1:44,1:45:0.96:30,0,1	1/1:24,0:24:0.85:6,1,0	1/1:28,1:29:12.53:143,13,0	1/1:13,2:15:4.48:70,4,0	1/1:21,0:21:37.69:460,38,0	1/1:27,1:27:34.77:424,35,0	1/1:17,1:18:10.03:96,10,0	0/0:20,0:20:60.20:0,60,857	0/0:19,0:19:54.18:0,54,769	0/0:29,0:29:87.29:0,87,1235	1/1:32,0:32:7.04:49,7,0	1/1:31,1:32:30.83:377,31,0	0/1:35,0:36:0.11:0,0,1	1/1:13,3:16:13.18:164,13,0
chr10	81018634	.	T	TTG	15434.91	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-7.521;DP=735;FS=3.968;HRun=0;HaplotypeScore=135.0292;InbreedingCoeff=0.9886;MQ=70.49;MQ0=3;MQRankSum=2.969;QD=36.66;ReadPosRankSum=2.300;VQSLOD=6.9773;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:35:8.62:0,9,462	1/1:0,8:8:15.05:290,15,0	0/0:33,0:26:78.16:0,78,1011	0/0:29,0:24:63.07:0,63,787	1/1:1,29:32:72.24:1214,72,0	0/0:26,0:26:78.25:0,78,1133	0/0:19,0:19:57.19:0,57,840	1/1:2,32:34:93.26:1288,93,0	0/0:27,0:27:81.23:0,81,1164	1/1:0,19:19:57.18:788,57,0	1/1:3,24:27:62.31:1069,62,0	0/0:28,0:29:84.26:0,84,1240	0/0:3,0:19:44.89:0,45,405	0/0:9,0:28:59.88:0,60,555	1/1:1,43:44:82.08:1619,82,0	1/1:1,24:25:54.18:1042,54,0	1/1:3,26:29:45.15:806,45,0	1/1:3,12:15:23.97:402,24,0	1/1:5,19:25:63.18:884,63,0	1/1:4,23:27:67.03:1116,67,0	1/1:1,16:17:30.91:613,31,0	0/0:20,0:20:60.20:0,60,896	0/0:19,0:19:54.18:0,54,799	0/0:29,0:29:87.29:0,87,1290	1/1:1,31:32:51.17:984,51,0	1/1:1,31:32:85.13:1489,85,0	1/1:0,35:36:66.23:1275,66,0	1/1:3,13:16:30.91:557,31,0
chr10	81019946	.	G	GA	8623.67	PASS	AB=0.567;AC=31;AF=0.554;AN=56;BaseQRankSum=8.865;DP=441;FS=0.806;HRun=7;HaplotypeScore=60.1099;InbreedingCoeff=0.8933;MQ=83.24;MQ0=0;MQRankSum=-2.810;QD=30.58;ReadPosRankSum=0.241;VQSLOD=5.1214;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.08:0,48,463	1/1:2,11:13:33.10:397,33,0	0/0:15,0:15:20.84:0,21,246	0/0:12,0:12:0.44:0,0,122	1/1:5,25:30:72.18:851,72,0	0/0:20,0:20:60.10:0,60,579	0/0:12,0:12:33.02:0,33,307	1/1:1,31:32:93.26:1099,93,0	0/0:14,0:14:33.05:0,33,319	1/1:1,27:28:81.25:978,81,0	1/1:2,14:16:42.09:491,42,0	0/0:12,0:12:30.04:0,30,290	0/0:13,0:13:36.06:0,36,348	0/0:11,0:11:30.01:0,30,281	1/1:1,10:11:27.08:326,27,0	1/1:1,11:12:27.08:326,27,0	1/1:2,12:14:36.11:435,36,0	1/1:1,9:10:27.08:322,27,0	0/1:4,13:17:9.84:444,0,10	1/1:2,24:26:69.17:817,69,0	1/1:1,7:8:15.05:181,15,0	0/0:8,0:8:21.03:0,21,203	0/0:19,0:19:48.08:0,48,463	0/0:5,0:5:15:0,15,138	1/1:0,17:17:45.14:544,45,0	1/1:5,13:18:39.12:471,39,0	1/1:2,17:19:48.15:580,48,0	1/1:0,11:11:30.09:362,30,0
chr10	81027854	.	T	TA	672.98	PASS	AB=0.967;AC=13;AF=0.464;AN=28;BaseQRankSum=-2.369;DP=143;FS=6.311;HRun=8;HaplotypeScore=22.4753;InbreedingCoeff=0.5048;MQ=71.06;MQ0=12;MQRankSum=0.838;QD=9.61;ReadPosRankSum=2.535;VQSLOD=0.1062;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:15:30.09:346,30,0	./.	0/1:28,0:13:35.98:36,0,81	0/0:41,0:13:8.59:0,9,39	./.	0/0:7,0:7:9:0,9,81	0/0:4,0:4:9:0,9,82	./.	./.	./.	./.	0/0:1,0:1:3:0,3,27	1/1:1,5:6:15.04:173,15,0	1/1:2,3:4:9.02:100,9,0	./.	./.	./.	1/1:5,1:5:3.01:35,3,0	./.	./.	./.	0/0:1,0:1:2.50:0,2,9	0/0:3,0:3:9:0,9,82	0/0:1,0:1:3:0,3,27	./.	./.	1/1:0,1:1:3.01:35,3,0	1/1:6,2:7:6.02:69,6,0
chr10	81030173	.	AG	A	218.36	PASS	AC=10;AF=0.556;AN=18;BaseQRankSum=1.373;DP=73;FS=0.000;HRun=6;HaplotypeScore=20.9394;MQ=20.64;MQ0=34;MQRankSum=0.387;QD=10.40;ReadPosRankSum=-0.599;VQSLOD=-0.4070;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:3:6.02:0,6,78	./.	./.	./.	./.	1/1:0,2:2:6.02:64,6,0	0/0:2,0:2:6.02:0,6,79	./.	1/1:0,3:3:6.01:63,6,0	./.	./.	1/1:0,6:4:12.03:127,12,0	0/0:6,0:6:12.04:0,12,154	0/0:4,0:4:8.99:0,9,99	./.	./.	./.	./.	./.	./.	./.	1/1:0,5:2:3.01:32,3,0	1/1:1,4:4:3.01:32,3,0	./.	./.	./.	./.	./.
chr10	81030252	.	T	TA	887.78	PASS	AB=1.000;AC=9;AF=0.346;AN=26;BaseQRankSum=-4.790;DP=140;FS=2.327;HRun=10;HaplotypeScore=42.6685;InbreedingCoeff=0.6536;MQ=58.90;MQ0=4;MQRankSum=0.087;QD=14.09;ReadPosRankSum=-1.938;VQSLOD=2.8509;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:20:23.46:443,23,0	./.	0/0:5,0:3:5.98:0,6,49	0/0:3,0:1:3:0,3,25	./.	0/0:10,0:10:21.58:0,22,108	0/0:8,0:8:17.98:0,18,148	./.	0/0:10,0:10:3.20:0,3,76	./.	./.	0/0:7,0:7:14.43:0,14,80	1/1:3,10:13:27.07:286,27,0	1/1:3,11:14:26.66:265,27,0	./.	./.	./.	./.	1/1:3,0:3:1.92:8,2,0	./.	./.	0/1:11,0:11:4.44:4,0,46	0/0:25,0:24:22.86:0,23,214	0/0:6,0:6:14.53:0,15,84	./.	./.	./.	./.
chr10	81030691	.	CA	C	39.31	PASS	AB=0.560;AC=4;AF=0.071;AN=56;BaseQRankSum=-1.337;DP=371;FS=1.211;HRun=9;HaplotypeScore=150.2116;InbreedingCoeff=0.1590;MQ=66.66;MQ0=0;MQRankSum=1.466;QD=0.79;ReadPosRankSum=-0.399;VQSLOD=0.0822;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,19:26:28.69:101,0,29	0/0:8,0:8:11.76:0,12,75	0/0:9,0:8:11.02:0,11,78	0/0:9,0:6:3:0,3,25	0/0:15,0:15:14.51:0,15,82	0/0:15,0:15:21.05:0,21,231	0/0:10,1:11:3.89:0,4,219	0/0:21,0:22:47.83:0,48,251	0/0:11,0:11:12.03:0,12,137	0/0:14,0:14:18.10:0,18,132	0/0:8,0:8:5.68:0,6,28	0/0:11,0:12:17.92:0,18,185	0/1:2,11:13:15.67:23,0,16	1/1:1,10:11:2.84:14,3,0	0/0:14,0:14:13.82:0,14,81	0/0:20,0:20:6.19:0,6,30	0/0:9,0:10:11.52:0,12,63	0/0:7,0:7:5.82:0,6,37	0/0:16,0:18:38.56:0,39,183	0/0:15,0:15:14.49:0,14,82	0/0:9,0:9:11.53:0,12,62	0/0:11,0:11:21.03:0,21,226	0/0:13,0:12:21.03:0,21,227	0/0:10,0:10:15.04:0,15,171	0/0:15,0:16:17.17:0,17,91	0/0:16,0:16:36.95:0,37,180	0/0:24,0:24:23.13:0,23,132	0/0:4,0:4:8.69:0,9,50
chr10	81030893	.	T	TAA	1380.84	PASS	AB=0.759;AC=18;AF=0.321;AN=56;BaseQRankSum=1.999;DP=469;FS=13.667;HRun=15;HaplotypeScore=84.3351;InbreedingCoeff=0.7370;MQ=58.40;MQ0=7;MQRankSum=-2.524;QD=10.23;ReadPosRankSum=-2.724;VQSLOD=0.2372;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:27:38.84:387,39,0	0/1:7,0:9:3.25:3,0,58	0/0:20,0:10:3.96:0,4,27	0/0:12,1:7:2.34:0,2,10	0/0:21,0:23:17.32:0,17,141	1/1:1,8:10:12.03:133,12,0	0/0:14,0:17:16.83:0,17,118	0/0:30,0:29:44.31:0,44,353	1/1:1,6:9:12.02:123,12,0	0/0:24,0:26:46.75:0,47,343	0/0:19,0:19:29.25:0,29,230	1/1:1,1:10:6.01:56,6,0	1/1:2,8:12:17.49:178,17,0	0/1:8,6:13:1.69:170,0,2	0/0:20,0:23:31.74:0,32,271	0/0:20,0:21:47.43:0,47,407	0/0:16,0:16:26.62:0,27,213	0/0:8,0:10:8.78:0,9,110	0/0:10,0:12:5.54:0,6,79	0/0:16,0:22:11.75:0,12,250	0/0:7,0:7:5.60:0,6,47	1/1:3,8:12:14.93:142,15,0	1/1:13,3:19:35.14:315,35,0	1/1:1,0:7:6.01:63,6,0	0/0:14,0:18:22.57:0,23,153	0/0:18,0:18:8.84:0,9,185	0/0:18,0:20:32.67:0,33,287	0/0:13,0:14:12.45:0,12,153
chr10	81031699	.	A	AG	487.10	PASS	AB=1.000;AC=13;AF=0.325;AN=40;BaseQRankSum=-0.821;DP=126;FS=0.000;HRun=5;HaplotypeScore=23.4314;InbreedingCoeff=0.4990;MQ=50.73;MQ0=13;MQRankSum=-1.997;QD=14.76;ReadPosRankSum=-1.176;VQSLOD=1.1073;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:5:3.01:0,3,32	0/0:1,0:1:0:0,0,0	0/0:17,0:5:5.16:0,5,58	0/0:16,0:4:5.97:0,6,47	1/1:1,9:10:3.01:39,3,0	0/0:7,0:5:3.01:0,3,31	0/0:1,0:1:3.01:0,3,31	1/1:1,7:7:18.06:237,18,0	0/0:6,0:5:15.04:0,15,161	1/1:1,3:4:12.03:146,12,0	./.	0/1:3,0:3:0:0,0,0	0/0:4,0:3:6.02:0,6,64	0/0:5,0:4:6.01:0,6,63	./.	1/1:0,1:1:3.01:36,3,0	0/0:1,0:1:3.01:0,3,32	./.	./.	0/0:1,1:2:3.01:0,3,32	./.	0/0:3,0:3:3.01:0,3,32	0/0:7,0:5:12.03:0,12,129	./.	./.	1/1:0,1:1:3.01:39,3,0	1/1:0,6:6:9.03:118,9,0	./.
chr10	81031713	.	GT	G	1838.68	PASS	AC=46;AF=0.920;AN=50;BaseQRankSum=-3.839;DP=139;FS=7.145;HRun=4;HaplotypeScore=22.3563;InbreedingCoeff=0.3085;MQ=51.24;MQ0=10;MQRankSum=0.182;QD=18.20;ReadPosRankSum=1.368;VQSLOD=2.0261;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:6:12.04:144,12,0	1/1:0,1:1:3.01:36,3,0	0/0:17,0:5:8.17:0,8,78	0/0:18,0:4:8.97:0,9,82	1/1:1,10:11:3.01:36,3,0	1/1:1,6:6:3.01:36,3,0	1/1:0,1:1:3.01:36,3,0	1/1:2,4:6:12.04:142,12,0	1/1:0,7:6:15.05:180,15,0	1/1:0,4:4:12.04:144,12,0	1/1:0,7:6:6.02:71,6,0	./.	1/1:0,4:4:9.03:108,9,0	1/1:1,5:5:9.03:108,9,0	1/1:0,2:2:3.01:36,3,0	1/1:0,1:1:3.01:36,3,0	1/1:1,2:3:9.02:97,9,0	./.	1/1:0,2:2:6.02:72,6,0	1/1:0,2:2:3.01:36,3,0	./.	1/1:0,2:2:3.01:36,3,0	1/1:0,7:6:12.04:144,12,0	1/1:0,2:2:6.02:72,6,0	1/1:0,8:8:15.05:179,15,0	1/1:0,1:1:3.01:36,3,0	1/1:0,5:5:6.02:72,6,0	1/1:1,3:4:9.02:97,9,0
chr10	81031783	.	T	TA	4366.16	PASS	AB=0.545;AC=31;AF=0.554;AN=56;BaseQRankSum=-3.646;DP=298;FS=31.109;HRun=10;HaplotypeScore=37.5379;InbreedingCoeff=0.8636;MQ=57.60;MQ0=5;MQRankSum=0.304;QD=24.53;ReadPosRankSum=1.868;VQSLOD=3.3351;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:48.76:0,49,396	1/1:2,6:8:24.02:243,24,0	0/0:6,0:2:5.95:0,6,44	0/0:6,1:5:9.81:0,10,40	1/1:1,14:15:33.08:350,33,0	0/0:6,0:7:14.02:0,14,104	0/0:11,0:11:26.97:0,27,222	1/1:5,20:24:59.94:606,60,0	0/0:15,0:14:35.95:0,36,294	1/1:2,9:11:30.05:310,30,0	1/1:2,5:7:15.04:160,15,0	0/0:5,0:5:8.98:0,9,73	0/0:11,0:11:26.95:0,27,219	0/0:10,0:9:23.95:0,24,196	1/1:0,4:4:12.03:128,12,0	1/1:1,4:5:6.02:64,6,0	1/1:2,11:13:33.08:352,33,0	1/1:0,15:15:42.11:448,42,0	1/1:4,2:6:12.03:126,12,0	0/1:1,5:6:6.60:142,0,7	1/1:0,4:4:9.02:96,9,0	0/0:3,0:3:8.99:0,9,74	0/0:10,0:10:20.97:0,21,171	0/0:8,0:8:23.97:0,24,197	1/1:2,18:20:45.11:480,45,0	1/1:3,6:9:18.05:192,18,0	1/1:4,11:15:36.09:381,36,0	1/1:1,13:13:27.07:288,27,0
chr10	81033227	.	G	GA	3888.25	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-12.510;DP=604;FS=11.737;HRun=7;HaplotypeScore=58.0221;InbreedingCoeff=0.9884;MQ=68.84;MQ0=0;MQRankSum=-1.302;QD=30.86;ReadPosRankSum=3.631;VQSLOD=3.1425;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:75.07:0,75,716	0/0:7,0:7:21:0,21,195	0/0:16,0:16:21.83:0,22,330	0/0:7,0:7:15.02:0,15,141	0/0:34,0:34:81.12:0,81,782	1/1:3,22:25:60.18:725,60,0	0/0:17,0:17:45.06:0,45,429	0/0:33,0:33:90.14:0,90,869	1/1:1,15:16:43.37:510,43,0	0/0:32,0:32:78.11:0,78,750	0/0:22,0:22:54.08:0,54,521	1/1:2,17:19:50.52:588,51,0	0/0:23,0:23:60.09:0,60,579	0/0:20,0:20:57.06:0,57,539	0/0:20,0:20:54.07:0,54,516	0/0:24,0:24:63.08:0,63,602	0/0:18,0:18:51.07:0,51,486	0/0:8,0:8:12.01:0,12,116	0/0:26,0:26:69.10:0,69,662	0/0:35,0:35:93.13:0,93,892	0/0:10,0:10:30.05:0,30,290	1/1:1,19:20:57.17:688,57,0	1/1:2,35:37:90.26:1087,90,0	1/1:0,9:9:24.07:290,24,0	0/0:22,0:22:63.10:0,63,608	0/0:34,0:34:96.15:0,96,927	0/0:29,0:29:75.12:0,75,724	0/0:11,0:11:33.05:0,33,319
chr10	81033653	.	A	ATG	14307.79	PASS	AB=0.531;AC=37;AF=0.661;AN=56;BaseQRankSum=-3.654;DP=729;FS=7.668;HRun=0;HaplotypeScore=110.9205;InbreedingCoeff=0.8910;MQ=61.00;MQ0=6;MQRankSum=1.263;QD=28.67;ReadPosRankSum=1.195;VQSLOD=6.5037;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:57.19:921,57,0	1/1:0,8:8:12.04:201,12,0	0/0:33,0:21:20.80:0,21,471	0/0:32,0:16:26.16:0,26,349	1/1:4,28:32:69.10:1110,69,0	0/0:27,0:27:69.22:0,69,873	0/0:21,0:21:45.02:0,45,520	1/1:16,23:41:78.21:1153,78,0	0/0:23,0:23:57.17:0,57,710	1/1:5,35:39:99:1706,111,0	1/1:7,20:27:38.80:587,39,0	0/0:15,0:15:39.11:0,39,481	0/1:2,15:17:2.06:515,0,2	1/1:2,18:20:24.08:401,24,0	1/1:9,28:39:4.55:842,5,0	1/1:1,28:29:69.24:1154,69,0	1/1:9,17:26:32.39:507,32,0	1/1:11,2:13:14.01:167,14,0	1/1:6,15:21:51.17:826,51,0	1/1:4,18:22:2.90:612,3,0	1/1:11,31:43:75.04:1249,75,0	0/0:29,0:29:56.01:0,56,824	0/0:28,0:28:66.20:0,66,818	0/0:21,0:21:45.61:0,46,573	1/1:8,18:27:36.11:575,36,0	1/1:7,20:26:63.10:983,63,0	1/1:5,20:25:37.68:595,38,0	1/1:3,11:14:12.51:202,13,0
chr10	81033758	.	ATG	A	753.58	PASS	AB=0.958;AC=34;AF=0.739;AN=46;BaseQRankSum=3.328;DP=576;FS=0.000;HRun=0;HaplotypeScore=152.6042;InbreedingCoeff=0.2935;MQ=58.18;MQ0=3;MQRankSum=-1.876;QD=1.82;ReadPosRankSum=3.944;VQSLOD=2.5166;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:27:2.37:8,2,0	0/1:5,0:5:0:0,0,0	./.	./.	1/1:16,0:19:2.84:14,3,0	1/1:17,9:26:9.02:98,9,0	0/0:22,0:22:18.50:0,18,225	0/0:29,0:28:2.99:0,3,23	1/1:15,7:23:11.86:111,12,0	1/1:17,0:18:2.84:14,3,0	./.	0/1:12,2:14:26.48:26,0,37	1/1:14,0:20:17.04:83,17,0	1/1:17,0:25:10.89:50,11,0	1/1:21,0:27:23.61:114,24,0	1/1:13,0:19:2.84:14,3,0	1/1:15,0:17:8.05:36,8,0	0/0:6,0:6:5.81:0,6,53	0/0:15,0:15:1.36:0,1,3	1/1:19,0:20:2.79:18,3,0	0/1:53,0:53:14.23:15,0,14	1/1:17,0:17:4.55:28,5,0	1/1:14,1:16:6.02:65,6,0	1/1:14,10:25:14.87:144,15,0	1/1:17,0:20:6.15:29,6,0	0/1:21,0:22:9.06:18,0,9	./.	./.
chr10	81033982	.	G	GTT	2752.80	PASS	AB=1.000;AC=40;AF=0.800;AN=50;BaseQRankSum=1.223;DP=255;FS=6.667;HRun=1;HaplotypeScore=60.6778;InbreedingCoeff=0.4981;MQ=33.36;MQ0=3;MQRankSum=-2.139;QD=13.05;ReadPosRankSum=2.369;VQSLOD=0.7883;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:11:3.06:3,0,32	1/1:3,0:3:5.95:42,6,0	./.	0/0:6,0:2:2.44:0,2,30	1/1:2,8:10:8.22:42,8,0	1/1:10,0:10:8.14:37,8,0	./.	1/1:14,0:14:11.39:214,11,0	0/1:22,0:22:3.47:3,0,32	1/1:16,0:16:42.86:670,43,0	1/1:13,0:13:29.72:190,30,0	0/0:7,0:7:2.45:0,2,17	./.	0/0:6,0:5:2.67:0,3,24	1/1:9,0:9:25.81:157,26,0	1/1:5,0:5:9.62:53,10,0	1/1:7,0:8:4.36:24,4,0	1/1:3,0:3:6.42:43,6,0	1/1:2,3:4:6.16:122,6,0	1/1:13,0:12:32.08:244,32,0	1/1:6,1:7:14.63:122,15,0	1/1:12,0:12:6.91:36,7,0	1/1:15,0:14:0.47:1,0,0	0/0:7,0:7:5.98:0,6,47	1/1:9,0:9:21.05:140,21,0	1/1:10,0:10:29.59:370,30,0	1/1:11,0:11:27.90:293,28,0	1/1:4,0:4:11.89:83,12,0
chr10	81034114	.	TAC	T	546.60	PASS	AB=1.000;AC=26;AF=0.684;AN=38;BaseQRankSum=5.721;DP=121;FS=20.453;HRun=0;HaplotypeScore=55.1621;InbreedingCoeff=0.2191;MQ=37.02;MQ0=11;MQRankSum=-0.649;QD=5.81;ReadPosRankSum=-0.112;VQSLOD=1.0740;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:5,0:5:1.07:14,1,0	./.	0/0:4,0:1:3:0,3,27	0/0:10,0:10:0.94:0,1,3	1/1:1,3:4:12.02:136,12,0	./.	1/1:20,0:17:10.50:139,11,0	./.	1/1:8,0:8:5.03:58,5,0	0/1:12,0:12:3.84:11,0,4	1/1:0,1:1:3.01:37,3,0	0/0:1,0:2:0.47:0,0,1	./.	1/1:1,0:1:2.94:18,3,0	./.	1/1:4,0:4:2.94:18,3,0	1/1:1,0:1:2.96:19,3,0	1/1:9,0:4:11.88:79,12,0	0/1:9,0:9:3.74:10,0,4	./.	./.	0/0:1,0:1:0.47:0,0,1	./.	1/1:10,0:9:1.97:29,2,0	1/1:5,0:5:7.37:55,7,0	0/0:6,0:6:0.94:0,1,1	1/1:5,0:2:2.89:17,3,0
chr10	81034135	.	ATGTG	A	1950.21	PASS	AB=0.600;AC=27;AF=0.794;AN=34;BaseQRankSum=1.035;DP=118;FS=7.548;HRun=0;HaplotypeScore=51.1178;InbreedingCoeff=0.3179;MQ=45.21;MQ0=7;MQRankSum=-1.391;QD=23.22;ReadPosRankSum=2.393;VQSLOD=2.2227;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,2:2:3.01:52,3,0	0/0:2,0:2:6.02:0,6,129	0/0:5,0:2:3.01:0,3,35	./.	1/1:1,0:6:11.73:86,12,0	./.	1/1:7,15:21:42.14:688,42,0	0/0:1,0:2:2.60:0,3,10	1/1:2,5:7:18.06:292,18,0	1/1:3,3:6:3.01:52,3,0	1/1:0,0:1:3:26,3,0	./.	./.	1/1:0,1:1:3.01:52,3,0	./.	1/1:3,4:7:6.02:104,6,0	1/1:2,0:2:3.01:41,3,0	1/1:5,5:5:15.03:231,15,0	1/1:1,2:3:3.01:52,3,0	./.	./.	./.	./.	1/1:2,4:6:6.02:104,6,0	1/1:0,5:5:15.04:233,15,0	./.	0/1:2,4:5:11.93:46,0,12
chr10	81034207	.	G	GTA	834.08	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.278;DP=276;FS=7.677;HRun=0;HaplotypeScore=45.5973;InbreedingCoeff=0.7684;MQ=70.26;MQ0=0;MQRankSum=1.717;QD=33.36;ReadPosRankSum=1.387;VQSLOD=5.2160;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:33.11:561,33,0	0/0:7,0:7:18.03:0,18,216	0/0:11,0:7:14.90:0,15,147	0/0:10,0:8:10.84:0,11,61	0/0:17,0:17:39.13:0,39,505	0/0:9,0:9:18.06:0,18,234	0/0:3,0:3:9.03:0,9,116	0/0:47,0:47:99:0,114,1351	0/0:8,0:8:21.04:0,21,244	0/0:11,0:11:30.10:0,30,390	0/0:13,0:13:27.09:0,27,351	0/0:2,0:2:6.02:0,6,78	1/1:1,5:6:9.03:153,9,0	1/1:0,5:5:15.05:254,15,0	0/0:10,0:10:30.10:0,30,389	0/0:7,0:7:17.98:0,18,199	0/0:14,0:14:39.11:0,39,490	0/0:5,0:5:15.05:0,15,192	0/0:13,0:13:36.09:0,36,438	0/0:10,0:9:24.05:0,24,283	0/0:3,0:3:9.01:0,9,100	0/0:1,0:1:3.01:0,3,39	0/0:6,0:6:15.05:0,15,194	0/0:4,0:4:12.04:0,12,155	0/0:13,0:13:36.12:0,36,468	0/0:4,0:4:12.04:0,12,156	0/0:18,0:18:42.08:0,42,525	0/0:5,0:5:6.02:0,6,78
chr10	81034965	.	GT	G	2590.11	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.962;DP=514;FS=0.473;HRun=2;HaplotypeScore=69.3513;InbreedingCoeff=0.9609;MQ=95.90;MQ0=0;MQRankSum=-2.902;QD=31.98;ReadPosRankSum=1.204;VQSLOD=3.3701;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:75.24:971,75,0	0/0:13,0:13:36.12:0,36,539	0/0:25,0:25:69.21:0,69,1005	0/0:24,0:24:72.20:0,72,1017	0/0:11,0:11:21.07:0,21,313	0/0:24,0:24:60.20:0,60,896	0/0:23,0:23:69.23:0,69,1033	0/0:16,0:16:48.14:0,48,669	0/0:22,0:22:66.20:0,66,950	0/0:14,0:14:36.12:0,36,538	0/0:17,0:17:51.15:0,51,723	0/0:20,0:20:54.17:0,54,784	1/1:0,26:26:63.20:814,63,0	1/1:2,26:28:36.26:947,36,0	0/0:25,0:25:72.24:0,72,1078	0/0:15,0:15:45.13:0,45,634	0/0:11,0:11:27.09:0,27,404	0/0:3,0:3:5.99:0,6,66	0/0:16,0:16:45.13:0,45,636	0/0:14,0:14:42.14:0,42,627	0/0:17,0:17:45.12:0,45,633	0/0:13,0:13:36.12:0,36,540	0/0:8,0:8:24.08:0,24,360	0/0:24,0:24:72.23:0,72,1056	0/0:21,0:21:60.20:0,60,891	0/0:22,0:22:63.19:0,63,908	0/0:18,0:18:51.17:0,51,762	0/0:17,0:17:51.17:0,51,762
chr10	81035020	.	AT	A	11302.68	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=0.913;DP=605;FS=4.745;HRun=10;HaplotypeScore=71.9390;InbreedingCoeff=0.9568;MQ=77.58;MQ0=0;MQRankSum=-4.192;QD=20.59;ReadPosRankSum=5.561;VQSLOD=5.5203;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:32:71.96:625,72,0	1/1:1,10:12:32.03:266,32,0	0/0:18,0:16:34.66:0,35,322	0/0:17,0:15:18.38:0,18,205	1/1:3,18:21:47.97:417,48,0	1/1:3,23:27:65.01:553,65,0	0/0:21,0:21:54.15:0,54,597	1/1:6,22:28:65.91:562,66,0	1/1:1,22:23:62.99:547,63,0	1/1:1,17:18:50.99:443,51,0	1/1:3,27:30:65.95:573,66,0	1/1:5,12:17:32.97:286,33,0	1/1:5,13:18:41.94:358,42,0	1/1:3,21:24:17.78:383,18,0	1/1:3,25:28:40.31:544,40,0	1/1:1,17:18:47.99:417,48,0	1/1:1,15:16:38.99:339,39,0	1/1:0,2:2:6:52,6,0	1/1:2,18:20:23.77:429,24,0	1/1:1,34:35:95.98:833,96,0	1/1:1,19:20:47.99:417,48,0	1/1:3,22:25:68.98:598,69,0	1/1:2,20:22:53.55:468,54,0	1/1:3,17:20:47.98:417,48,0	1/1:4,23:27:42.24:500,42,0	1/1:0,24:24:68.98:599,69,0	1/1:4,23:27:47.98:417,48,0	1/1:5,10:15:29.96:260,30,0
chr10	81035609	.	G	GA	2378.36	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.778;DP=545;FS=5.736;HRun=3;HaplotypeScore=49.4471;InbreedingCoeff=0.9938;MQ=87.79;MQ0=0;MQRankSum=-4.040;QD=33.98;ReadPosRankSum=3.102;VQSLOD=4.0413;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:87.29:1219,87,0	0/0:10,0:10:30.05:0,30,334	0/0:15,0:15:42.11:0,42,486	0/0:24,0:23:63:0,63,702	0/0:29,0:29:81.25:0,81,970	0/0:17,0:17:51.16:0,51,612	0/0:13,0:13:36.11:0,36,432	0/0:36,0:36:99:0,105,1242	0/0:20,0:20:57.17:0,57,684	0/0:17,0:17:45.14:0,45,540	0/0:20,0:20:54.15:0,54,636	0/0:18,0:18:45.14:0,45,540	1/1:0,13:13:30.08:420,30,0	1/1:2,23:25:63.21:882,63,0	0/0:22,0:22:66.20:0,66,792	0/0:20,0:20:60.18:0,60,719	0/0:22,0:22:63.19:0,63,755	0/0:6,0:6:18.06:0,18,216	0/0:16,0:16:45.14:0,45,538	0/0:28,0:28:78.24:0,78,935	0/0:12,0:12:36.11:0,36,432	0/0:19,0:19:51.16:0,51,611	0/0:24,0:24:69.21:0,69,827	0/0:20,0:19:60.18:0,60,720	0/0:20,0:20:60.18:0,60,720	0/0:22,0:22:63.19:0,63,756	0/0:19,0:19:57.17:0,57,684	0/0:6,0:6:18.06:0,18,216
chr10	81036011	.	G	GA	1508.29	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-1.226;DP=418;FS=1.964;HRun=6;HaplotypeScore=65.4877;InbreedingCoeff=0.9759;MQ=69.66;MQ0=1;MQRankSum=-3.537;QD=27.93;ReadPosRankSum=0.899;VQSLOD=4.2930;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:28:66.15:799,66,0	0/0:6,0:5:15.03:0,15,152	0/0:12,0:12:32.87:0,33,293	0/0:9,0:9:14.19:0,14,169	0/0:26,0:26:72.14:0,72,725	0/0:15,0:15:42.05:0,42,417	0/0:10,0:10:24.02:0,24,234	0/0:32,0:32:90.14:0,90,895	0/0:10,0:10:30.05:0,30,298	0/0:20,0:20:57.12:0,57,577	0/0:14,0:14:27.06:0,27,275	0/0:10,0:10:21.04:0,21,214	1/1:1,10:11:30.10:374,30,0	1/1:1,13:14:39.11:477,39,0	0/0:8,0:8:21.01:0,21,203	0/0:8,0:8:17.95:0,18,162	0/0:23,0:22:54.12:0,54,550	0/0:6,0:6:18.04:0,18,183	0/0:15,0:15:45.09:0,45,454	0/0:19,0:19:50.98:0,51,504	0/0:11,0:11:27.05:0,27,269	0/0:8,0:8:24.05:0,24,245	0/0:10,0:10:27.05:0,27,269	0/0:10,0:10:30.04:0,30,297	0/0:23,0:23:69.15:0,69,698	0/0:18,0:18:42.08:0,42,419	0/0:24,0:23:54.11:0,54,550	0/0:17,0:17:51.12:0,51,519
chr10	81036064	.	ATT	A	4629.90	PASS	AB=0.639;AC=40;AF=0.714;AN=56;BaseQRankSum=-5.815;DP=311;FS=3.024;HRun=13;HaplotypeScore=54.6194;InbreedingCoeff=0.6361;MQ=60.66;MQ0=8;MQRankSum=1.850;QD=19.45;ReadPosRankSum=2.754;VQSLOD=4.1770;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:22:42.08:0,42,419	1/1:3,7:9:21:198,21,0	0/0:5,1:6:2.37:0,2,8	0/0:11,0:9:10.48:0,10,101	1/1:1,10:11:24.03:233,24,0	1/1:2,6:8:18.02:175,18,0	0/0:8,0:10:17.46:0,17,171	1/1:9,13:22:26.28:310,26,0	0/1:2,4:7:0.12:99,0,0	0/1:6,11:18:0.96:255,0,1	1/1:0,6:7:20.77:187,21,0	1/1:3,4:6:9:87,9,0	0/0:3,0:8:18.03:0,18,170	0/0:7,0:10:22.83:0,23,224	1/1:1,3:4:9.01:87,9,0	1/1:1,10:10:30.05:290,30,0	1/1:5,11:16:30.03:291,30,0	0/1:3,1:4:23.06:23,0,27	0/1:4,10:14:50.84:255,0,51	1/1:4,11:14:39.05:372,39,0	1/1:1,3:4:9.01:87,9,0	1/1:0,9:9:27.04:261,27,0	1/1:1,12:12:33.04:319,33,0	1/1:3,6:9:15.01:145,15,0	1/1:5,4:9:14.99:145,15,0	1/1:2,12:14:36.05:349,36,0	1/1:3,8:11:33.04:315,33,0	1/1:7,5:12:15.01:145,15,0
chr10	81036082	.	C	CTT	2788.63	PASS	AB=0.935;AC=35;AF=0.625;AN=56;BaseQRankSum=-2.309;DP=368;FS=6.304;HRun=13;HaplotypeScore=76.0807;InbreedingCoeff=0.5979;MQ=40.00;MQ0=11;MQRankSum=-4.386;QD=10.10;ReadPosRankSum=-2.507;VQSLOD=1.5898;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:21:22.65:0,23,95	1/1:6,7:12:24.91:306,25,0	1/1:4,0:2:3.01:32,3,0	0/1:8,0:5:0:0,0,0	1/1:10,4:15:14.94:158,15,0	0/0:14,0:13:23.89:0,24,208	0/0:11,0:11:17.91:0,18,157	1/1:23,3:26:32.44:318,32,0	0/0:9,0:7:8.85:0,9,79	1/1:10,7:18:24.78:354,25,0	1/1:3,10:16:29.47:314,29,0	0/1:8,1:7:28.71:29,0,67	0/0:4,0:5:5.25:0,5,23	0/1:7,0:7:6.22:7,0,6	0/1:3,0:3:0:0,0,0	0/1:10,2:13:9.19:120,0,9	1/1:11,10:20:13.90:139,14,0	1/1:4,0:3:2.04:6,2,0	1/1:17,2:20:16.70:197,17,0	1/1:9,4:14:17.37:191,17,0	0/1:3,0:3:0:0,0,0	0/1:11,0:13:0.38:0,0,44	0/0:19,0:19:38.44:0,38,316	0/0:8,0:9:20.73:0,21,169	1/1:4,10:14:15.47:183,15,0	1/1:16,4:20:23.95:251,24,0	1/1:12,3:15:14.41:164,14,0	1/1:7,5:12:15.05:201,15,0
chr10	81037285	.	A	ATTGTT	4118.16	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.537;DP=657;FS=0.547;HRun=0;HaplotypeScore=126.6361;InbreedingCoeff=0.9885;MQ=76.45;MQ0=0;MQRankSum=-4.909;QD=47.89;ReadPosRankSum=2.882;VQSLOD=3.8085;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,25:41:75.21:1958,75,0	0/0:15,0:15:36.09:0,36,613	0/0:16,0:17:34.26:0,34,521	0/0:29,0:29:41.64:0,42,707	0/0:37,0:37:90.26:0,90,1579	0/0:28,0:28:54.14:0,54,995	0/0:20,0:20:48.15:0,48,885	0/0:28,0:28:54.17:0,54,948	0/0:29,0:29:60.19:0,60,1104	0/0:27,0:27:60.19:0,60,1088	0/0:18,0:18:36.11:0,36,643	0/0:26,0:26:69.22:0,69,1230	1/1:9,13:24:39.13:1133,39,0	1/1:5,15:21:36.12:1027,36,0	0/0:26,0:26:66.20:0,66,1189	0/0:21,0:21:57.18:0,57,1024	0/0:23,0:23:45.13:0,45,805	0/0:12,0:12:27.04:0,27,478	0/0:23,0:23:45.15:0,45,821	0/0:22,0:22:57.18:0,57,1030	0/0:25,0:25:54.18:0,54,1032	0/0:26,0:26:60.19:0,60,1116	0/0:26,0:26:69.21:0,69,1243	0/0:29,0:29:81.26:0,81,1502	0/0:18,0:18:48.16:0,48,908	0/0:23,0:23:60.20:0,60,1117	0/0:19,0:19:54.19:0,54,1020	0/0:4,0:4:12.04:0,12,219
chr10	81038074	.	TA	T	16184.08	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=15.895;DP=644;FS=3.119;HRun=2;HaplotypeScore=97.0447;InbreedingCoeff=0.9938;MQ=90.09;MQ0=0;MQRankSum=-4.808;QD=36.45;ReadPosRankSum=2.848;VQSLOD=5.2791;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,51:52:99:1868,144,0	1/1:0,5:5:12.04:156,12,0	0/0:28,0:28:77.96:0,78,1096	0/0:22,0:22:63.21:0,63,914	1/1:0,29:29:87.22:1093,87,0	0/0:16,0:16:48.16:0,48,719	0/0:27,0:27:81.27:0,81,1214	1/1:1,26:27:78.25:1013,78,0	0/0:21,0:21:63.19:0,63,906	1/1:1,28:29:78.21:980,78,0	1/1:0,21:21:60.20:779,60,0	0/0:29,0:29:87.28:0,87,1283	1/1:0,22:22:66.21:857,66,0	1/1:1,20:21:60.19:779,60,0	1/1:0,24:24:72.23:935,72,0	1/1:1,28:29:81.26:1052,81,0	1/1:0,22:22:60.20:779,60,0	1/1:0,10:10:27.09:350,27,0	1/1:1,19:20:57.19:740,57,0	1/1:0,24:24:72.17:913,72,0	1/1:0,27:27:78.12:988,78,0	0/0:18,0:18:54.17:0,54,790	0/0:22,0:22:66.18:0,66,914	0/0:17,0:17:51.17:0,51,763	1/1:0,21:21:60.20:779,60,0	1/1:0,24:24:72.22:920,72,0	1/1:1,29:30:74.81:973,75,0	1/1:0,7:7:18.06:234,18,0
chr10	81038235	.	TAC	T	10730.74	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-5.208;DP=754;FS=2.854;HRun=0;HaplotypeScore=157.1912;InbreedingCoeff=0.9696;MQ=61.03;MQ0=5;MQRankSum=-0.042;QD=20.60;ReadPosRankSum=3.733;VQSLOD=5.4129;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,28:42:60.16:705,60,0	1/1:4,13:17:28.33:324,28,0	0/0:30,0:18:23.76:0,24,266	0/0:25,0:20:30.21:0,30,367	1/1:8,29:37:56.51:681,57,0	0/0:22,0:23:21.94:0,22,272	0/0:25,0:25:57.06:0,57,755	1/1:22,27:49:78.09:838,78,0	0/0:23,0:23:41.91:0,42,353	1/1:10,23:33:63.14:732,63,0	1/1:5,30:35:57.17:683,57,0	0/0:23,0:23:35.04:0,35,298	1/1:4,19:23:54.17:647,54,0	1/1:3,16:19:39.12:464,39,0	1/1:4,21:25:42.13:504,42,0	1/1:7,13:20:51.63:612,52,0	1/1:7,16:23:30.09:357,30,0	1/1:10,6:16:2.54:213,3,0	1/1:5,10:15:26.94:262,27,0	1/1:4,23:27:51.16:611,51,0	1/1:9,13:22:36.11:430,36,0	0/0:26,0:26:44.03:0,44,374	0/0:32,0:32:55.05:0,55,452	0/0:26,0:26:42.45:0,42,362	1/1:10,27:37:66.20:792,66,0	1/1:13,20:33:70.99:803,71,0	1/1:10,21:31:54.14:641,54,0	1/1:0,17:17:36.11:431,36,0
chr10	81039364	.	AT	A	7461.54	PASS	AB=0.524;AC=37;AF=0.661;AN=56;BaseQRankSum=12.263;DP=485;FS=3.069;HRun=10;HaplotypeScore=66.9460;InbreedingCoeff=0.8839;MQ=80.96;MQ0=0;MQRankSum=-2.054;QD=21.20;ReadPosRankSum=1.115;VQSLOD=5.9460;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:41.99:365,42,0	1/1:1,9:10:23.99:208,24,0	0/0:17,0:17:20.89:0,21,276	0/0:10,0:10:12.03:0,12,127	1/1:1,23:24:68.98:599,69,0	0/0:23,0:23:51.14:0,51,564	0/0:10,0:10:27.04:0,27,280	1/1:10,20:30:59.97:518,60,0	0/0:15,0:15:45.11:0,45,490	1/1:4,22:26:65.92:562,66,0	1/1:3,24:27:56.95:495,57,0	0/0:9,1:10:4.05:0,4,273	1/1:0,8:8:21:182,21,0	1/1:1,16:17:47.99:417,48,0	1/1:3,9:12:20.99:182,21,0	0/1:1,10:11:3.19:204,0,3	1/1:1,12:13:35.99:313,36,0	1/1:1,8:9:23.99:208,24,0	1/1:6,14:20:2:316,2,0	1/1:3,20:23:59.97:521,60,0	1/1:0,13:13:29.99:260,30,0	0/0:17,0:17:42.11:0,42,465	0/0:24,0:24:57.14:0,57,623	0/0:7,0:7:21.06:0,21,232	1/1:0,23:24:68.02:579,68,0	1/1:1,26:27:74.95:646,75,0	1/1:2,12:14:35.99:313,36,0	1/1:3,26:29:65.98:573,66,0
chr10	81039784	.	TGA	T	5607.54	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=17.405;DP=590;FS=7.671;HRun=0;HaplotypeScore=177.0275;InbreedingCoeff=0.9201;MQ=95.96;MQ0=0;MQRankSum=-10.378;QD=14.45;ReadPosRankSum=3.576;VQSLOD=3.8473;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:44,0:43:99:657,107,0	1/1:11,0:11:23.98:109,24,0	0/0:34,0:34:93.23:0,93,1639	0/0:28,0:28:70.61:0,71,1176	1/1:23,0:23:44.43:233,44,0	0/0:18,0:18:54.19:0,54,1011	0/0:20,0:20:60.16:0,60,1083	1/1:28,0:25:53.58:324,54,0	0/0:23,0:23:66.23:0,66,1228	1/1:30,0:30:81.59:573,82,0	1/1:16,2:18:39.58:272,40,0	0/0:15,0:15:45.14:0,45,804	1/1:13,1:14:32.82:193,33,0	1/1:14,2:16:40.71:288,41,0	1/1:22,0:21:50.58:357,51,0	0/1:18,0:17:12.29:247,0,12	1/1:16,0:16:43.98:290,44,0	1/1:8,0:8:20.41:133,20,0	1/1:10,0:9:24.87:127,25,0	1/1:23,0:23:47.30:271,47,0	1/1:14,2:16:33:192,33,0	0/0:20,0:20:57.20:0,57,1068	0/0:23,0:23:69.22:0,69,1260	0/0:21,0:21:60.21:0,60,1123	1/1:26,0:26:60.58:374,61,0	1/1:26,0:25:60.51:470,61,0	1/1:32,1:33:73.38:435,73,0	1/1:6,0:6:13.69:63,14,0
chr10	81039789	.	T	TCTC	20734.01	PASS	AB=0.517;AC=37;AF=0.661;AN=56;BaseQRankSum=15.756;DP=577;FS=4.403;HRun=0;HaplotypeScore=131.7582;InbreedingCoeff=0.9187;MQ=99.54;MQ0=0;MQRankSum=-9.351;QD=56.65;ReadPosRankSum=6.194;VQSLOD=6.7476;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:40:99:2326,102,0	1/1:0,9:9:27.09:633,27,0	0/0:37,0:37:95.17:0,95,1664	0/0:29,0:30:76.39:0,76,1206	1/1:0,21:22:39.13:912,39,0	0/0:18,0:18:54.19:0,54,1007	0/0:23,0:23:69.22:0,69,1231	1/1:0,20:20:57.18:1240,57,0	0/0:22,0:22:66.23:0,66,1221	1/1:3,28:31:87.29:2018,87,0	1/1:2,15:17:39.13:894,39,0	0/0:16,0:16:48.15:0,48,862	1/1:1,12:13:36.12:819,36,0	1/1:2,13:15:42.14:935,42,0	1/1:1,20:21:51.18:1198,51,0	0/1:1,13:14:16.60:806,0,17	1/1:0,17:17:45.15:1059,45,0	1/1:0,8:8:21.07:495,21,0	1/1:1,10:11:30.07:660,30,0	1/1:0,20:22:51.18:1200,51,0	1/1:2,15:18:30.10:694,30,0	0/0:22,0:22:63.20:0,63,1136	0/0:22,0:22:66.23:0,66,1228	0/0:21,0:21:63.20:0,63,1139	1/1:0,24:24:63.22:1475,63,0	1/1:0,18:20:60.16:1201,60,0	1/1:1,30:31:78.27:1821,78,0	1/1:0,6:6:15.05:348,15,0
chr10	81041089	.	TTGG	T	4008.94	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=3.475;DP=206;FS=76.541;HRun=0;HaplotypeScore=44.2237;InbreedingCoeff=0.5677;MQ=79.96;MQ0=13;MQRankSum=-4.408;QD=30.84;ReadPosRankSum=4.595;VQSLOD=0.9608;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:10:23.69:236,24,0	1/1:0,2:2:3.01:52,3,0	0/0:45,0:15:16.51:0,17,446	0/0:22,0:11:11.74:0,12,123	1/1:1,5:6:15.05:246,15,0	1/1:5,0:5:11.98:110,12,0	0/0:9,0:9:23.98:0,24,363	1/1:3,10:10:27.05:362,27,0	1/1:5,0:5:9.01:88,9,0	1/1:0,6:6:18.06:300,18,0	1/1:0,6:6:12.04:195,12,0	1/1:5,0:5:5.85:44,6,0	1/1:0,0:3:9.03:113,9,0	1/1:0,0:1:3.01:36,3,0	1/1:0,3:3:6.02:104,6,0	1/1:0,4:4:9.03:157,9,0	1/1:1,4:5:12.04:194,12,0	1/1:1,3:4:6.02:104,6,0	1/1:2,8:9:24.08:394,24,0	1/1:1,5:5:12.04:209,12,0	1/1:2,2:3:6.02:91,6,0	1/1:2,0:2:3.89:35,4,0	1/1:2,0:2:5.99:48,6,0	1/1:4,0:3:5.99:51,6,0	1/1:0,1:1:3.01:52,3,0	1/1:2,11:12:30.10:474,30,0	1/1:2,6:8:18.06:314,18,0	0/1:2,0:2:0:0,0,0
chr10	81041091	.	GGTTT	G	1678.06	PASS	AB=1.000;AC=47;AF=0.870;AN=54;BaseQRankSum=3.800;DP=206;FS=79.473;HRun=0;HaplotypeScore=53.2749;InbreedingCoeff=0.5595;MQ=75.43;MQ0=20;MQRankSum=-4.079;QD=12.91;ReadPosRankSum=5.023;VQSLOD=-0.3781;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:10:4.71:27,5,0	1/1:3,0:2:2.90:16,3,0	0/0:44,0:14:31.66:0,32,394	0/0:21,0:10:16.04:0,16,136	1/1:6,0:6:14.45:79,14,0	1/1:1,3:4:8.99:172,9,0	0/0:9,0:9:27.03:0,27,459	1/1:14,0:10:23.41:138,23,0	1/1:1,3:5:9.03:149,9,0	1/1:6,0:6:17.57:103,18,0	1/1:6,0:6:11.56:63,12,0	1/1:0,4:5:5.23:67,5,0	1/1:3,0:3:2.98:22,3,0	0/1:1,0:1:0:0,0,0	1/1:3,0:3:5.75:30,6,0	1/1:5,0:4:8.68:47,9,0	1/1:5,0:5:11.57:64,12,0	1/1:3,0:3:5.78:31,6,0	1/1:9,0:8:23.48:141,23,0	1/1:8,0:5:11.52:60,12,0	1/1:4,0:3:5.86:35,6,0	1/1:3,0:2:6.01:77,6,0	1/1:0,2:2:6.02:106,6,0	1/1:1,3:3:6.02:109,6,0	1/1:2,0:1:2.90:16,3,0	1/1:12,0:11:29.31:176,29,0	1/1:6,0:6:17.35:93,17,0	./.
chr10	81041776	.	T	TTC	21411.82	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-10.343;DP=630;FS=10.885;HRun=0;HaplotypeScore=72.8753;InbreedingCoeff=0.9995;MQ=59.45;MQ0=2;MQRankSum=-3.706;QD=45.95;ReadPosRankSum=3.075;VQSLOD=5.7323;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:27:59.32:1024,59,0	1/1:0,14:14:33.11:592,33,0	0/0:19,0:17:37.32:0,37,442	0/0:19,0:14:38.94:0,39,459	1/1:2,19:22:48.15:858,48,0	0/0:27,0:27:78.22:0,78,1152	0/0:10,0:10:27.04:0,27,374	1/1:1,30:31:90.21:1451,90,0	0/0:12,0:12:33.07:0,33,455	1/1:0,27:28:81.23:1349,81,0	1/1:0,33:34:90.30:1611,90,0	0/0:20,0:20:60.20:0,60,905	1/1:0,25:25:72.25:1289,72,0	1/1:1,20:21:45.15:805,45,0	1/1:0,25:25:66.23:1179,66,0	1/1:2,23:25:63.21:1128,63,0	1/1:0,21:21:57.20:1021,57,0	1/1:0,16:16:36.12:646,36,0	1/1:2,24:26:72.18:1215,72,0	1/1:0,22:22:63.15:1092,63,0	1/1:1,16:17:42.14:754,42,0	0/0:25,0:25:71.94:0,72,1029	0/0:19,0:19:48.16:0,48,725	0/0:13,0:13:39.13:0,39,590	1/1:0,27:27:78.27:1396,78,0	1/1:0,28:28:84.28:1477,84,0	1/1:2,42:44:99:2039,114,0	1/1:0,10:10:27.09:484,27,0
chr10	81042626	.	C	CT	14777.40	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=0.657;DP=667;FS=1.023;HRun=6;HaplotypeScore=96.5583;InbreedingCoeff=0.9974;MQ=78.13;MQ0=0;MQRankSum=-3.570;QD=32.19;ReadPosRankSum=2.357;VQSLOD=4.5327;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:57.14:699,57,0	1/1:0,7:7:18.06:226,18,0	0/0:20,0:20:44.91:0,45,429	0/0:17,0:16:35.98:0,36,355	1/1:0,33:33:90.09:1072,90,0	0/0:31,0:31:87.18:0,87,882	0/0:17,0:17:45.08:0,45,452	1/1:5,22:27:66.18:803,66,0	0/0:25,0:25:69.15:0,69,699	1/1:4,32:36:96.31:1205,96,0	1/1:1,26:27:75.16:907,75,0	0/0:27,0:27:75.16:0,75,764	1/1:1,24:25:66.21:830,66,0	1/1:0,20:20:51.16:642,51,0	1/1:1,33:34:93.30:1170,93,0	1/1:0,22:22:63.20:793,63,0	1/1:3,21:24:57.18:717,57,0	1/1:0,6:5:18.06:226,18,0	1/1:5,20:25:57.16:716,57,0	1/1:0,40:40:99:1416,114,0	1/1:1,13:15:39.12:480,39,0	0/0:31,0:31:90.17:0,90,904	0/0:19,0:19:48.08:0,48,482	0/0:21,0:21:60.14:0,60,612	1/1:1,15:16:45.10:548,45,0	1/1:2,21:23:60.18:742,60,0	1/1:5,34:39:90.29:1132,90,0	1/1:2,13:15:36.12:453,36,0
chr10	81042908	.	CAGAGAGAGAGAGAGAG	C	4852.61	PASS	AB=0.792;AC=31;AF=0.620;AN=50;BaseQRankSum=4.616;DP=453;FS=37.915;HRun=0;HaplotypeScore=194.9545;InbreedingCoeff=0.6975;MQ=70.55;MQ0=19;MQRankSum=-5.476;QD=21.86;ReadPosRankSum=0.610;VQSLOD=2.5109;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:19:23.33:82,0,23	1/1:3,1:7:9.01:95,9,0	0/0:39,0:18:6.29:0,6,93	0/0:57,0:30:38.46:0,38,442	1/1:8,0:14:9.02:156,9,0	0/0:4,0:17:39.13:0,39,1191	0/0:26,0:31:54.63:0,55,1722	1/1:15,17:32:51.12:950,51,0	0/0:3,0:10:12.04:0,12,450	1/1:5,12:17:39.11:908,39,0	./.	0/0:10,0:15:30.99:0,31,853	1/1:8,1:12:24.07:510,24,0	1/1:3,0:7:3.01:81,3,0	1/1:10,1:11:3.01:97,3,0	./.	1/1:12,0:13:6.02:179,6,0	1/1:4,0:10:6.02:178,6,0	1/1:23,0:22:23.98:475,24,0	1/1:6,8:13:3.01:82,3,0	1/1:9,0:9:3.01:50,3,0	0/0:5,0:7:18.06:0,18,664	0/0:1,0:6:12.04:0,12,568	0/0:9,0:18:33.11:0,33,1301	./.	1/1:5,1:11:27.02:693,27,0	1/1:14,1:13:6.02:164,6,0	1/1:4,0:5:6.02:153,6,0
chr10	81042922	.	G	GAC	2476.45	PASS	AC=32;AF=0.640;AN=50;BaseQRankSum=8.229;DP=370;FS=42.306;HRun=0;HaplotypeScore=99.4655;InbreedingCoeff=0.7733;MQ=59.34;MQ0=22;MQRankSum=-5.779;QD=15.19;ReadPosRankSum=0.994;VQSLOD=1.3163;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:19:7.93:66,8,0	1/1:5,2:7:5.94:43,6,0	0/0:29,0:11:12.61:0,13,80	0/0:45,0:19:40.28:0,40,348	1/1:10,0:10:9:97,9,0	0/0:20,0:20:47.65:0,48,366	0/0:29,0:27:57.06:0,57,677	1/1:23,0:22:50.87:504,51,0	0/0:10,0:10:14.96:0,15,118	1/1:12,2:14:39.02:530,39,0	./.	0/0:14,0:14:19.10:0,19,181	1/1:9,0:9:23.89:229,24,0	1/1:5,0:5:3.01:47,3,0	1/1:1,4:5:3.01:52,3,0	./.	1/1:4,6:10:6.02:99,6,0	1/1:7,1:8:6.02:95,6,0	1/1:10,2:9:23.93:288,24,0	1/1:9,1:9:3.01:47,3,0	1/1:8,0:7:3:25,3,0	0/0:8,0:7:17.96:0,18,161	0/0:8,0:7:14.95:0,15,114	0/0:19,0:17:29.21:0,29,254	./.	1/1:8,1:9:26.98:348,27,0	1/1:2,8:9:6.02:101,6,0	1/1:1,2:3:6.02:94,6,0
chr10	81042934	.	G	GAC	1892.23	PASS	AB=0.965;AC=25;AF=0.500;AN=50;BaseQRankSum=6.787;DP=350;FS=18.768;HRun=0;HaplotypeScore=104.3737;InbreedingCoeff=0.2417;MQ=46.61;MQ0=17;MQRankSum=-6.146;QD=10.12;ReadPosRankSum=1.810;VQSLOD=1.9826;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:2.87:0,3,15	0/0:6,0:6:2.94:0,3,18	0/0:13,0:2:2.84:0,3,14	0/0:23,0:6:8.97:0,9,95	1/1:12,0:12:3.01:47,3,0	0/0:19,0:19:42.70:0,43,258	0/0:23,0:21:44.58:0,45,555	1/1:22,0:21:10.11:263,10,0	0/0:10,0:10:11.71:0,12,82	0/1:18,0:18:30.97:428,0,31	./.	0/1:10,2:12:81.97:82,0,100	1/1:8,0:8:14.90:155,15,0	1/1:6,0:6:3.01:47,3,0	1/1:12,0:12:2.68:52,3,0	./.	1/1:9,0:9:6.02:99,6,0	1/1:11,0:11:6.49:95,6,0	0/1:12,0:10:38.89:179,0,39	1/1:14,0:13:2.97:47,3,0	./.	0/0:7,0:6:14.29:0,14,89	0/0:8,0:7:14.69:0,15,104	0/1:16,2:16:84:84,0,140	0/1:10,0:10:0:0,0,0	0/1:10,0:10:12.88:282,0,13	0/1:11,0:10:8.96:97,0,9	1/1:2,0:2:6.02:94,6,0
chr10	81042970	.	CAGAGAG	C	1453.35	PASS	AB=0.981;AC=29;AF=0.518;AN=56;BaseQRankSum=3.400;DP=455;FS=52.553;HRun=0;HaplotypeScore=149.7645;InbreedingCoeff=0.5184;MQ=36.80;MQ0=52;MQRankSum=-7.240;QD=7.12;ReadPosRankSum=0.660;VQSLOD=1.1721;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:14:0:0,0,0	1/1:6,1:7:11.64:84,12,0	0/0:67,0:10:16.60:0,17,158	0/0:82,0:8:14.93:0,15,122	0/1:12,0:12:0.20:0,0,1	0/0:15,0:15:23.62:0,24,464	0/0:23,0:22:26.33:0,26,431	1/1:16,0:15:44.67:350,45,0	0/0:10,0:10:9.03:0,9,161	1/1:19,0:19:2.77:311,3,0	0/1:15,0:15:0:1,0,0	0/0:9,0:9:8.43:0,8,178	1/1:8,1:9:1.69:59,2,0	1/1:4,0:4:2.16:8,2,0	0/1:15,1:16:0.40:0,0,1	1/1:7,0:7:5.69:56,6,0	0/0:6,0:6:0:0,0,0	1/1:8,0:8:8.05:59,8,0	0/1:12,0:11:4.62:221,0,5	1/1:17,2:18:5.52:68,6,0	1/1:7,0:6:2.97:20,3,0	0/0:10,0:9:8.91:0,9,211	0/0:9,0:9:11.64:0,12,242	0/0:19,0:17:29.64:0,30,527	0/1:10,0:10:0:1,0,0	1/1:10,1:11:5.20:239,5,0	0/1:11,1:11:8.58:83,0,9	1/1:5,0:4:5.39:55,5,0
chr10	81042992	.	GACAGAGAC	G	3989.09	PASS	AB=0.625;AC=38;AF=0.679;AN=56;BaseQRankSum=5.282;DP=483;FS=29.035;HRun=0;HaplotypeScore=145.4827;InbreedingCoeff=0.5315;MQ=45.83;MQ0=46;MQRankSum=-3.462;QD=17.57;ReadPosRankSum=4.039;VQSLOD=1.4390;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:5,9:14:0:0,0,0	1/1:1,4:5:9.03:230,9,0	0/0:84,0:14:11.99:0,12,213	0/0:122,0:27:22.54:0,23,798	0/0:3,11:14:0.73:0,1,1	1/1:8,4:12:12.03:243,12,0	0/0:22,0:22:15.64:0,16,1255	1/1:15,0:14:15.05:255,15,0	0/1:1,7:8:0:0,0,0	1/1:4,10:14:36.10:818,36,0	0/1:6,4:10:0:0,0,0	0/1:2,9:11:0:0,0,0	1/1:3,6:9:2.72:76,3,0	1/1:0,4:4:2.75:77,3,0	1/1:5,13:18:2.12:54,2,0	1/1:2,5:7:8.77:209,9,0	0/1:2,1:3:0.14:0,0,0	1/1:5,3:8:3.01:77,3,0	1/1:6,5:11:15.05:384,15,0	1/1:6,9:14:8.67:211,9,0	1/1:3,1:4:3.01:77,3,0	0/0:2,9:10:0.09:0,0,0	0/1:3,6:9:0:0,0,0	0/1:8,7:14:0:0,0,0	0/1:2,7:9:0:0,0,0	1/1:2,8:10:24.08:614,24,0	1/1:4,6:10:12.04:307,12,0	1/1:3,3:5:15.05:357,15,0
chr10	81042998	.	GAC	G	734.08	PASS	AB=0.976;AC=28;AF=0.500;AN=56;BaseQRankSum=6.768;DP=457;FS=29.527;HRun=0;HaplotypeScore=139.4804;InbreedingCoeff=0.0430;MQ=50.30;MQ0=40;MQRankSum=-3.026;QD=3.32;ReadPosRankSum=3.222;VQSLOD=0.7240;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,1:14:0:1,0,0	0/1:5,0:5:24.02:24,0,41	0/0:74,1:16:43.34:0,43,559	0/0:104,0:25:19:0,19,505	0/1:12,2:14:0.29:0,0,0	0/1:11,0:11:77.90:78,0,113	0/0:24,1:25:59.26:0,59,1066	0/1:16,2:17:99:184,0,305	0/0:8,0:8:3.01:0,3,55	0/1:13,0:13:76.04:76,0,93	0/1:9,0:9:0:1,0,0	0/1:10,0:10:0:1,0,0	0/1:9,1:10:18.83:19,0,19	1/1:4,0:4:2.45:12,2,0	1/1:19,0:19:5.43:80,5,0	1/1:7,0:7:8.30:59,8,0	0/1:3,0:3:0.07:0,0,0	0/1:7,0:7:2.92:3,0,65	0/1:11,0:11:26.50:27,0,232	1/1:16,0:15:3.67:53,4,0	1/1:4,0:4:2.74:12,3,0	0/1:10,0:9:0.34:1,0,0	0/0:9,0:8:2.13:0,2,54	0/0:13,0:12:5.84:0,6,110	0/1:9,0:9:0:1,0,0	0/1:10,0:10:42.48:65,0,42	0/1:10,0:10:39.26:39,0,40	1/1:5,2:6:17.22:141,17,0
chr10	81043016	.	C	CAG	261.59	PASS	AB=0.975;AC=19;AF=0.339;AN=56;BaseQRankSum=3.149;DP=373;FS=2.872;HRun=0;HaplotypeScore=140.9758;InbreedingCoeff=-0.1198;MQ=63.21;MQ0=15;MQRankSum=-0.907;QD=1.13;ReadPosRankSum=-2.413;VQSLOD=2.3714;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:13:0:0,0,0	1/1:4,0:4:8.90:60,9,0	0/0:48,0:20:44.69:0,45,678	0/1:78,0:35:17.56:18,0,606	0/0:15,0:15:2.54:0,3,45	0/1:10,0:10:30.05:30,0,96	0/0:24,0:24:49.33:0,49,903	0/1:19,2:20:74.37:74,0,451	0/0:8,0:8:3.01:0,3,46	0/1:12,0:12:48.41:48,0,119	0/1:6,0:6:0:1,0,0	0/1:9,0:9:0:0,0,0	0/1:9,0:9:12.04:12,0,40	0/0:4,0:4:2.70:0,3,15	0/0:14,2:16:5.50:0,6,81	0/1:6,0:6:9.09:9,0,43	0/0:1,0:1:0:0,0,0	0/0:7,0:7:5.91:0,6,60	0/0:10,0:10:26.53:0,27,261	0/1:13,0:13:49.60:87,0,50	0/1:2,2:4:14:14,0,40	0/1:9,0:9:0.05:0,0,0	0/0:8,0:7:2.72:0,3,43	0/1:8,0:7:0:0,0,0	0/1:8,0:8:0:0,0,0	0/1:8,0:8:14.55:15,0,83	0/1:7,0:7:4.49:4,0,47	0/1:6,0:6:17.97:18,0,113
chr10	81043044	.	CAG	C	2354.83	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=2.895;DP=283;FS=23.612;HRun=0;HaplotypeScore=115.7324;InbreedingCoeff=0.6876;MQ=81.84;MQ0=4;MQRankSum=-5.850;QD=20.13;ReadPosRankSum=1.021;VQSLOD=1.8021;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,8:10:18.03:234,18,0	0/0:3,1:4:0:0,0,0	0/0:41,0:31:23.54:0,24,648	0/0:51,0:31:43.54:0,44,490	1/1:4,6:10:2.63:39,3,0	0/0:6,0:6:9.03:0,9,153	0/0:18,0:18:51.17:0,51,867	1/1:4,14:18:42.14:545,42,0	0/0:6,0:6:15.05:0,15,255	1/1:4,5:9:15.05:195,15,0	0/0:4,0:4:0:0,0,0	0/0:8,0:8:9.03:0,9,153	1/1:3,5:8:15.05:194,15,0	1/1:1,2:3:5.99:78,6,0	1/1:0,11:11:27.03:346,27,0	1/1:1,3:4:9:117,9,0	0/0:1,0:1:0:0,0,0	1/1:2,1:3:3.01:39,3,0	1/1:6,4:9:12.04:155,12,0	1/1:3,6:9:8.88:117,9,0	1/1:1,2:3:3.01:39,3,0	0/0:7,0:7:0.47:0,0,1	0/0:8,0:8:12.01:0,12,174	0/0:6,0:5:0:0,0,0	0/0:2,1:3:0:0,0,0	1/1:4,3:7:9.03:117,9,0	1/1:1,5:6:12.01:156,12,0	1/1:2,4:6:12.04:156,12,0
chr10	81043819	.	G	GT	516.17	PASS	AB=0.921;AC=16;AF=0.286;AN=56;BaseQRankSum=-4.771;DP=521;FS=24.084;HRun=0;HaplotypeScore=334.6970;InbreedingCoeff=0.2533;MQ=48.30;MQ0=0;MQRankSum=1.225;QD=1.98;ReadPosRankSum=-5.475;VQSLOD=1.0582;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:28,1:29:13.63:14,0,14	0/0:5,0:5:4.37:0,4,10	0/1:6,3:9:47.53:121,0,48	0/1:7,3:11:32.61:90,0,33	0/0:22,1:23:17.82:0,18,66	0/0:20,0:20:5.85:0,6,21	0/0:9,0:9:6.26:0,6,12	1/1:37,2:39:32.60:157,33,0	0/0:20,0:20:15.80:0,16,36	1/1:35,0:35:20.34:108,20,0	0/1:21,1:22:4.91:5,0,58	0/1:22,0:22:20.68:36,0,21	0/0:24,0:24:22.06:0,22,83	0/0:19,0:19:5.14:0,5,33	0/1:24,1:25:12.86:27,0,13	0/0:13,0:13:9.51:0,10,25	0/0:13,0:13:10.12:0,10,23	0/1:9,0:9:0.32:2,0,0	1/1:18,0:18:14.17:48,14,0	0/0:23,0:23:21.19:0,21,52	0/0:10,0:10:6.04:0,6,14	0/0:13,0:13:10.81:0,11,25	0/0:13,0:13:2.53:0,3,19	0/0:8,1:9:9:0,9,21	0/1:21,0:21:12.65:15,0,13	1/1:21,0:21:10.19:62,10,0	0/0:32,0:32:17.83:0,18,58	0/0:14,0:14:3.83:0,4,17
chr10	81043821	.	C	CA	9058.59	PASS	AB=0.842;AC=53;AF=0.946;AN=56;BaseQRankSum=2.151;DP=524;FS=63.729;HRun=1;HaplotypeScore=302.2231;InbreedingCoeff=-0.0691;MQ=47.46;MQ0=0;MQRankSum=-0.773;QD=17.29;ReadPosRankSum=10.199;VQSLOD=1.4185;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:2.09:350,2,0	1/1:5,0:5:7.42:70,7,0	0/1:5,3:8:50.74:129,0,51	0/1:9,3:11:45.98:145,0,46	1/1:23,0:23:17.28:317,17,0	0/1:19,0:19:1.05:277,0,1	1/1:5,8:13:30.01:388,30,0	1/1:38,0:38:60.92:616,61,0	1/1:21,0:21:13.40:307,13,0	1/1:35,0:35:68.69:635,69,0	1/1:22,0:22:43.69:399,44,0	1/1:21,0:21:59.95:468,60,0	1/1:24,0:24:46.92:446,47,0	1/1:19,0:19:40.06:366,40,0	1/1:25,0:25:68.41:564,68,0	1/1:14,0:14:15.23:195,15,0	1/1:12,0:12:18.31:171,18,0	1/1:8,0:8:11.24:110,11,0	1/1:19,0:19:16.72:255,17,0	1/1:24,0:24:27.92:389,28,0	1/1:10,0:10:4.23:66,4,0	1/1:13,0:13:19.72:196,20,0	1/1:13,0:13:27.99:280,28,0	1/1:9,0:9:19.36:147,19,0	1/1:20,0:20:15.69:290,16,0	1/1:20,0:20:52.79:443,53,0	1/1:34,0:34:82.60:711,83,0	1/1:14,0:14:40.50:327,41,0
chr10	81043822	.	A	AT	17969.66	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=1.734;DP=534;FS=7.261;HRun=1;HaplotypeScore=278.2051;InbreedingCoeff=-0.0549;MQ=47.08;MQ0=0;MQRankSum=-2.806;QD=33.65;ReadPosRankSum=2.484;VQSLOD=3.4372;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,20:28:50.35:788,50,0	1/1:2,3:5:14.91:168,15,0	0/1:7,0:7:16.54:27,0,17	0/1:12,0:11:47.57:50,0,48	1/1:4,20:24:56.74:698,57,0	1/1:5,14:19:50.79:638,51,0	0/1:12,0:12:12.69:177,0,13	1/1:12,26:38:99:1408,114,0	1/1:4,17:21:59.67:717,60,0	1/1:6,28:34:99:1321,99,0	1/1:4,18:22:59.86:777,60,0	1/1:3,20:23:66.18:922,66,0	1/1:4,18:22:65.94:850,66,0	1/1:4,16:20:53.93:714,54,0	1/1:3,23:26:72.17:1013,72,0	1/1:5,9:14:41.63:482,42,0	1/1:4,9:13:38.72:453,39,0	1/1:5,5:10:26.87:345,27,0	1/1:11,12:23:57.03:737,57,0	1/1:4,20:24:62.89:817,63,0	1/1:3,6:9:20.62:197,21,0	1/1:3,9:12:29.91:387,30,0	1/1:2,11:13:38.91:521,39,0	1/1:1,9:10:21.02:274,21,0	1/1:7,14:21:53.79:663,54,0	1/1:2,19:21:57.12:821,57,0	1/1:4,32:36:99:1400,102,0	1/1:2,13:15:42.13:605,42,0
chr10	81046187	.	G	GT	9648.01	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-9.263;DP=546;FS=10.686;HRun=8;HaplotypeScore=58.9300;InbreedingCoeff=0.9793;MQ=79.99;MQ0=0;MQRankSum=-1.336;QD=26.29;ReadPosRankSum=2.622;VQSLOD=5.2257;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:23:37.97:200,38,0	1/1:3,4:7:12.04:139,12,0	0/0:28,0:25:52.89:0,53,446	0/0:20,0:17:11.59:0,12,200	1/1:1,21:22:60.18:693,60,0	0/0:27,0:27:63.02:0,63,577	0/0:19,0:19:57.03:0,57,521	1/1:5,27:32:78.22:888,78,0	0/0:14,0:14:41.90:0,42,372	1/1:2,12:14:11.65:388,12,0	1/1:0,16:16:45.13:519,45,0	0/0:17,0:17:45.02:0,45,411	1/1:3,0:22:39.73:207,40,0	1/1:1,0:15:36.68:187,37,0	1/1:1,12:13:36.11:415,36,0	1/1:1,16:17:42.12:485,42,0	1/1:0,17:17:42.12:485,42,0	1/1:1,14:15:40.67:454,41,0	1/1:2,17:19:48.10:523,48,0	1/1:3,28:31:81.12:891,81,0	1/1:0,8:8:24.07:277,24,0	0/0:22,0:22:57.02:0,57,522	0/0:27,0:27:69.03:0,69,632	0/0:4,0:4:12.01:0,12,110	1/1:0,20:20:60.18:693,60,0	1/1:1,24:25:69.19:784,69,0	1/1:5,34:40:90.27:1039,90,0	1/1:0,11:11:33.10:381,33,0
chr10	81046789	.	AGTGT	A	8588.15	PASS	AB=0.771;AC=49;AF=0.875;AN=56;BaseQRankSum=4.802;DP=531;FS=4.166;HRun=0;HaplotypeScore=126.3879;InbreedingCoeff=0.5141;MQ=58.42;MQ0=7;MQRankSum=-2.130;QD=17.42;ReadPosRankSum=2.431;VQSLOD=4.5762;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:29:12.04:139,12,0	1/1:1,8:9:14.95:246,15,0	0/0:12,0:5:2.97:0,3,20	0/1:13,0:10:0.01:0,0,130	1/1:8,15:24:30.09:470,30,0	1/1:5,0:19:33.04:308,33,0	0/0:23,0:25:44.55:0,45,889	1/1:9,8:17:24.06:315,24,0	1/1:4,0:15:21.02:196,21,0	1/1:8,12:20:36.04:504,36,0	1/1:9,14:24:27.08:409,27,0	1/1:4,0:15:18.02:168,18,0	1/1:16,0:16:27.08:326,27,0	1/1:18,0:18:27.07:303,27,0	1/1:4,8:12:17.84:274,18,0	1/1:3,5:9:9.02:126,9,0	1/1:6,30:36:69.24:1130,69,0	0/1:7,6:14:21.79:157,0,22	1/1:18,1:18:23.98:269,24,0	1/1:5,14:21:33.10:519,33,0	1/1:7,17:24:18.06:274,18,0	1/1:7,0:23:24.50:227,25,0	1/1:8,0:17:18.02:168,18,0	0/1:9,0:20:42.91:143,0,43	1/1:6,17:23:30.10:491,30,0	1/1:7,20:28:47.47:831,47,0	1/1:2,12:15:18.06:272,18,0	1/1:3,7:11:21.06:322,21,0
chr10	81046811	.	TGTGTGC	T	4393.52	PASS	AB=0.998;AC=29;AF=0.518;AN=56;BaseQRankSum=7.366;DP=509;FS=18.659;HRun=0;HaplotypeScore=149.9226;InbreedingCoeff=-0.2615;MQ=53.57;MQ0=8;MQRankSum=-6.843;QD=10.69;ReadPosRankSum=6.987;VQSLOD=2.3048;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,31:35:12.04:291,12,0	0/0:11,0:11:11.26:0,11,64	0/0:8,0:1:2.97:0,3,20	0/1:10,0:5:0.01:0,0,130	0/1:23,0:23:30.18:30,0,117	1/1:15,0:15:12.12:473,12,0	0/0:21,0:20:51.10:0,51,1335	0/1:16,0:16:99:199,0,163	0/1:14,0:14:25.86:295,0,26	0/1:19,0:19:78.31:78,0,96	0/1:20,0:20:29.94:30,0,75	0/1:16,0:16:12.91:265,0,13	1/1:1,16:17:27.09:645,27,0	1/1:2,16:18:27.09:639,27,0	0/1:12,0:12:21.38:43,0,21	0/1:10,0:10:33.69:34,0,77	0/0:36,0:36:22.29:0,22,108	0/1:11,0:11:52.04:52,0,55	1/1:7,6:11:1.46:207,1,0	0/1:24,0:25:18.02:18,0,142	0/1:28,0:26:9.95:10,0,91	0/1:22,0:22:67.36:339,0,67	0/1:14,0:14:52.87:236,0,53	0/1:17,0:17:99:257,0,104	0/0:22,0:22:5.94:0,6,32	0/1:29,0:28:99:156,0,162	1/1:16,0:14:5.90:55,6,0	0/1:10,0:10:15.40:42,0,15
chr10	81047959	.	AC	A	12701.23	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=4.672;DP=658;FS=26.785;HRun=10;HaplotypeScore=149.7558;InbreedingCoeff=0.8153;MQ=68.49;MQ0=0;MQRankSum=-3.041;QD=20.42;ReadPosRankSum=5.377;VQSLOD=3.4510;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,29:34:83.91:719,84,0	1/1:0,11:11:32.91:272,33,0	0/1:18,0:17:7.04:7,0,184	0/0:15,1:16:17.29:0,17,130	1/1:5,35:40:98.65:819,99,0	1/1:1,21:23:62.02:527,62,0	0/0:18,0:18:45.11:0,45,489	1/1:11,17:28:59.75:509,60,0	1/1:3,16:20:47.02:397,47,0	1/1:5,25:31:79.96:674,80,0	1/1:1,17:18:47.88:408,48,0	1/1:4,13:17:22.21:319,22,0	1/1:5,25:30:65.92:573,66,0	1/1:1,24:25:68.98:599,69,0	1/1:3,31:34:92.92:807,93,0	1/1:2,14:16:38.99:338,39,0	1/1:6,20:26:62.93:547,63,0	1/1:1,15:16:38.99:338,39,0	1/1:2,14:16:41.97:364,42,0	1/1:3,30:33:83.94:729,84,0	1/1:5,30:35:86.40:734,86,0	1/1:3,14:17:29.99:260,30,0	1/1:3,21:24:44.98:391,45,0	1/1:3,17:20:44.98:391,45,0	1/1:4,21:25:62.97:547,63,0	1/1:1,22:23:65.93:561,66,0	1/1:8,23:31:77.87:664,78,0	1/1:3,8:11:23.99:208,24,0
chr10	81048410	.	G	GA	18194.23	PASS	AB=0.522;AC=37;AF=0.661;AN=56;BaseQRankSum=17.552;DP=688;FS=3.010;HRun=0;HaplotypeScore=156.1283;InbreedingCoeff=0.9288;MQ=71.92;MQ0=0;MQRankSum=-5.707;QD=40.52;ReadPosRankSum=3.764;VQSLOD=4.2225;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:99:1670,108,0	1/1:1,9:10:21.07:334,21,0	0/0:24,0:23:60.18:0,60,803	0/0:18,0:18:50.70:0,51,686	1/1:1,24:25:51.14:701,51,0	0/0:27,0:27:78.24:0,78,1065	0/0:28,0:28:81.27:0,81,1130	1/1:4,21:25:66.17:987,66,0	0/0:42,0:42:99:0,123,1694	1/1:0,23:23:63.20:972,63,0	1/1:0,17:17:45.15:700,45,0	0/0:27,0:27:81.27:0,81,1127	1/1:2,28:30:81.26:1209,81,0	1/1:0,29:29:84.29:1327,84,0	1/1:0,31:31:93.31:1445,93,0	1/1:0,28:27:78.26:1172,78,0	1/1:0,25:25:66.23:1050,66,0	0/1:1,11:12:8.66:446,0,9	1/1:4,21:25:69.15:1001,69,0	1/1:0,18:18:45.15:702,45,0	1/1:2,43:45:99:1754,110,0	0/0:21,0:21:57.15:0,57,778	0/0:21,0:21:60.20:0,60,839	0/0:31,0:31:93.27:0,93,1271	1/1:0,12:12:30.10:461,30,0	1/1:3,25:28:78.22:1194,78,0	1/1:1,19:20:42.14:667,42,0	1/1:0,9:9:27.09:401,27,0
chr10	81048705	.	TTGTCACTG	T	11072.88	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=15.464;DP=425;FS=46.944;HRun=0;HaplotypeScore=162.0121;InbreedingCoeff=0.9388;MQ=92.60;MQ0=0;MQRankSum=-15.181;QD=51.99;ReadPosRankSum=1.093;VQSLOD=2.9015;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:19:36.12:1022,36,0	1/1:1,7:8:21.07:500,21,0	0/0:29,0:29:55.01:0,55,3077	0/0:18,0:18:48.12:0,48,1462	1/1:2,8:10:8.99:192,9,0	0/0:21,0:21:63.22:0,63,2610	0/0:27,0:27:78.27:0,78,3307	1/1:6,6:12:15.05:430,15,0	0/0:20,0:20:60.21:0,60,2567	1/1:1,11:12:33.11:946,33,0	1/1:4,6:10:6.02:172,6,0	0/0:31,0:31:93.32:0,93,4140	1/1:1,10:11:33.11:932,33,0	1/1:2,10:12:24.08:688,24,0	1/1:2,8:10:21.07:602,21,0	1/1:0,10:10:24.08:688,24,0	1/1:0,6:6:12.04:344,12,0	1/1:2,7:9:12.04:344,12,0	1/1:4,5:9:12.04:344,12,0	1/1:7,12:19:27.05:708,27,0	1/1:2,15:17:21.07:590,21,0	0/0:21,0:21:60.68:0,61,2673	0/0:11,0:11:33.11:0,33,1402	0/0:34,0:34:99:0,99,4425	1/1:4,9:13:21.07:589,21,0	1/1:1,9:10:27.09:774,27,0	1/1:0,14:14:36.12:1033,36,0	1/1:0,2:2:6.02:172,6,0
chr10	81048885	.	ACC	A	8225.42	PASS	AB=0.529;AC=37;AF=0.661;AN=56;BaseQRankSum=16.020;DP=529;FS=2.464;HRun=7;HaplotypeScore=144.6826;InbreedingCoeff=0.9094;MQ=87.11;MQ0=0;MQRankSum=-13.289;QD=28.36;ReadPosRankSum=0.931;VQSLOD=3.3847;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,11:16:24.07:300,24,0	1/1:2,6:8:18.06:229,18,0	0/0:23,0:23:60.20:0,60,1011	0/0:22,0:22:54.18:0,54,886	1/1:2,17:19:24.08:306,24,0	0/0:22,0:22:66.23:0,66,1143	0/0:36,0:36:90.25:0,90,1492	1/1:6,29:35:84.24:1053,84,0	0/0:33,0:33:93.32:0,93,1618	1/1:2,16:18:45.14:563,45,0	1/1:1,11:12:27.09:344,27,0	0/0:32,0:32:90.31:0,90,1570	1/1:1,24:25:63.16:781,63,0	1/1:1,12:13:36.11:450,36,0	1/1:1,13:14:33.10:420,33,0	0/1:1,8:9:31.41:208,0,31	1/1:5,7:12:15.04:188,15,0	1/1:2,6:8:12.04:153,12,0	1/1:0,8:8:24.08:303,24,0	1/1:0,22:22:51.16:644,51,0	1/1:0,10:10:21.53:265,22,0	0/0:16,0:16:42.14:0,42,723	0/0:16,0:16:45.14:0,45,756	0/0:39,0:39:99:0,111,1938	1/1:0,19:19:51.16:650,51,0	1/1:1,16:17:48.15:609,48,0	1/1:2,16:18:42.13:531,42,0	1/1:1,6:7:18.06:229,18,0
chr10	81051809	.	T	TA	10766.93	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-11.778;DP=448;FS=0.876;HRun=6;HaplotypeScore=39.1216;InbreedingCoeff=0.9591;MQ=70.99;MQ0=0;MQRankSum=0.766;QD=32.43;ReadPosRankSum=0.832;VQSLOD=4.7045;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:6:15.05:189,15,0	1/1:1,3:4:9.03:114,9,0	0/0:9,0:9:12:0,12,115	0/0:7,0:5:11.46:0,11,77	1/1:3,24:27:69.22:870,69,0	0/0:16,0:16:48.09:0,48,479	0/0:10,0:10:30.03:0,30,287	1/1:2,28:30:84.18:989,84,0	0/0:18,0:18:48.09:0,48,482	1/1:5,18:23:60.19:752,60,0	1/1:3,32:35:96.31:1208,96,0	0/0:17,0:17:48.09:0,48,482	1/1:1,18:19:48.15:605,48,0	1/1:5,12:17:48.11:560,48,0	1/1:3,9:12:21.07:265,21,0	1/1:2,15:17:42.13:530,42,0	1/1:0,12:12:33.07:399,33,0	1/1:1,5:6:18.05:214,18,0	1/1:2,16:18:48.15:605,48,0	1/1:2,22:24:66.21:832,66,0	1/1:0,2:2:6.02:76,6,0	0/0:10,0:10:27.05:0,27,271	0/0:20,0:20:54.10:0,54,543	0/0:9,0:9:21.04:0,21,214	1/1:2,20:22:51.16:643,51,0	1/1:3,17:20:51.15:629,51,0	1/1:1,24:25:63.20:794,63,0	1/1:2,11:13:39.12:492,39,0
chr10	81051909	.	G	GC	19608.13	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-8.936;DP=514;FS=0.631;HRun=1;HaplotypeScore=41.7391;InbreedingCoeff=0.9891;MQ=83.33;MQ0=0;MQRankSum=-8.342;QD=41.19;ReadPosRankSum=5.038;VQSLOD=4.6252;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:21.07:314,21,0	1/1:1,12:13:36.07:513,36,0	0/0:17,0:17:51.08:0,51,609	0/0:13,0:13:39.11:0,39,484	1/1:1,26:27:75.21:1099,75,0	1/1:0,32:31:90.09:1348,90,0	0/0:8,0:8:24.08:0,24,312	1/1:1,31:32:93.23:1271,93,0	1/1:1,12:13:36.12:539,36,0	1/1:2,29:31:87.28:1283,87,0	1/1:0,27:27:78.21:1143,78,0	1/1:2,12:14:39.12:565,39,0	1/1:1,17:18:42.14:629,42,0	1/1:0,24:24:63.21:944,63,0	1/1:0,18:18:51.17:764,51,0	1/1:2,10:13:39.12:550,39,0	1/1:0,8:8:24.08:359,24,0	1/1:0,8:8:24.08:360,24,0	1/1:3,24:27:75.24:1089,75,0	1/1:1,27:28:81.18:1163,81,0	1/1:1,7:8:21.07:315,21,0	1/1:0,15:15:45.15:674,45,0	1/1:0,18:18:54.18:807,54,0	1/1:1,6:7:15.05:225,15,0	1/1:1,13:14:39.13:584,39,0	1/1:1,16:17:51:734,51,0	1/1:0,18:18:51.17:764,51,0	1/1:2,36:38:99:1573,105,0
chr10	81052086	.	C	CT	13576.70	PASS	AB=0.875;AC=39;AF=0.696;AN=56;BaseQRankSum=-11.642;DP=514;FS=13.335;HRun=3;HaplotypeScore=46.6981;InbreedingCoeff=0.9116;MQ=67.44;MQ0=3;MQRankSum=-2.240;QD=35.54;ReadPosRankSum=0.931;VQSLOD=4.0367;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:66.21:906,66,0	1/1:0,5:5:15.01:188,15,0	0/0:15,0:11:30.07:0,30,344	0/0:15,0:12:30.98:0,31,359	1/1:0,28:28:84.24:1154,84,0	0/0:30,0:30:89.97:0,90,1039	0/0:11,0:11:24.06:0,24,276	1/1:2,26:27:75.19:995,75,0	0/0:16,0:16:48.15:0,48,576	1/1:1,29:30:87.29:1216,87,0	1/1:2,23:25:60.20:840,60,0	0/0:11,0:11:30.09:0,30,360	1/1:1,23:24:60.20:840,60,0	1/1:1,24:25:66.22:924,66,0	1/1:0,14:14:39.13:546,39,0	1/1:2,12:14:36.12:503,36,0	1/1:1,14:15:29.46:386,29,0	1/1:2,9:11:30.06:398,30,0	1/1:2,13:15:33.58:463,34,0	1/1:1,18:19:51.17:710,51,0	1/1:0,8:8:21.07:294,21,0	0/0:13,0:13:36.11:0,36,431	0/0:21,0:21:57.17:0,57,683	0/1:12,2:14:44.91:45,0,357	1/1:2,22:24:60.20:840,60,0	1/1:1,19:20:57.19:798,57,0	1/1:1,22:23:63.14:858,63,0	1/1:0,16:16:48.16:672,48,0
chr10	81052247	.	AT	A	8703	PASS	AB=0.581;AC=37;AF=0.661;AN=56;BaseQRankSum=11.329;DP=518;FS=12.588;HRun=8;HaplotypeScore=51.6363;InbreedingCoeff=0.9220;MQ=54.32;MQ0=13;MQRankSum=-0.270;QD=23.21;ReadPosRankSum=2.717;VQSLOD=4.5912;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:20:52.65:470,53,0	1/1:0,7:7:15.02:145,15,0	0/0:15,0:4:6.01:0,6,72	0/0:11,0:5:6.02:0,6,67	1/1:4,16:20:53.93:490,54,0	0/0:16,0:15:33.10:0,33,396	0/0:14,0:13:39.10:0,39,459	1/1:8,20:26:57.09:550,57,0	0/0:19,0:19:57.17:0,57,687	1/1:3,24:27:69.11:665,69,0	1/1:4,15:18:41.94:384,42,0	0/0:28,0:28:78.24:0,78,942	1/1:1,20:21:57.09:550,57,0	1/1:3,16:19:42.06:405,42,0	1/1:2,18:19:48.08:464,48,0	0/1:5,13:16:0.14:283,0,0	1/1:3,30:32:78.12:753,78,0	1/1:1,18:19:51.08:492,51,0	1/1:4,17:20:51.08:492,51,0	1/1:2,12:14:36:338,36,0	1/1:2,8:10:24.04:232,24,0	0/0:18,0:18:48.12:0,48,557	0/0:14,0:14:39.11:0,39,461	0/0:8,0:8:21.06:0,21,253	1/1:2,8:10:24.04:232,24,0	1/1:1,22:23:66.08:630,66,0	1/1:3,26:27:75.12:723,75,0	1/1:3,14:15:42.07:405,42,0
chr10	81052892	.	G	GAA	5994.08	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-12.816;DP=705;FS=6.447;HRun=7;HaplotypeScore=84.9783;InbreedingCoeff=0.9592;MQ=57.11;MQ0=1;MQRankSum=6.124;QD=41.34;ReadPosRankSum=2.330;VQSLOD=4.4172;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.19:0,69,794	0/0:12,0:12:30.08:0,30,348	0/0:25,0:22:52.15:0,52,554	0/0:21,0:21:45.02:0,45,490	0/0:31,0:31:72.20:0,72,839	1/1:2,26:28:66.23:1083,66,0	0/0:16,0:16:42.12:0,42,489	0/0:33,0:33:78.19:0,78,909	1/1:1,24:26:69.24:1132,69,0	0/0:25,0:25:66.19:0,66,769	0/0:25,0:25:48.12:0,48,559	1/1:4,22:26:57.19:935,57,0	0/0:26,0:26:72.21:0,72,839	0/0:26,0:26:72.21:0,72,839	0/0:26,0:26:69.20:0,69,803	0/0:17,1:18:1.89:0,2,504	0/0:33,0:33:90.26:0,90,1045	0/0:25,0:26:68.93:0,69,781	0/0:27,0:26:63.18:0,63,734	0/0:35,0:35:99:0,99,1142	0/0:18,0:18:51.15:0,51,594	1/1:1,25:27:77.75:1240,78,0	1/1:1,18:19:51.17:816,51,0	1/1:2,16:18:48.16:788,48,0	0/0:30,0:30:84.24:0,84,977	0/0:14,0:14:36.06:0,36,404	0/0:30,0:30:84.23:0,84,976	0/0:37,0:37:99:0,105,1148
chr10	81053273	.	T	TA	11727.32	PASS	AB=0.714;AC=54;AF=0.964;AN=56;BaseQRankSum=-2.928;DP=475;FS=0.000;HRun=2;HaplotypeScore=62.7029;InbreedingCoeff=-0.0342;MQ=46.75;MQ0=1;MQRankSum=0.235;QD=24.69;ReadPosRankSum=1.560;VQSLOD=4.5292;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,7:27:33.09:455,33,0	1/1:11,2:13:33.04:430,33,0	0/1:4,5:7:1.79:157,0,2	0/1:8,3:9:39.15:107,0,39	1/1:13,7:20:33.10:456,33,0	1/1:10,1:11:11.96:128,12,0	1/1:2,13:15:45.15:633,45,0	1/1:3,16:19:48.15:669,48,0	1/1:10,3:13:15.04:198,15,0	1/1:12,11:23:57.17:786,57,0	1/1:11,3:14:25.44:340,25,0	1/1:15,3:18:27.09:388,27,0	1/1:4,2:6:15.05:216,15,0	1/1:13,2:15:24.07:328,24,0	1/1:15,7:21:45.15:647,45,0	1/1:14,5:19:33.09:454,33,0	1/1:28,4:31:45.14:624,45,0	1/1:8,4:12:12.04:172,12,0	1/1:10,6:16:36.10:484,36,0	1/1:10,12:21:45.15:644,45,0	1/1:11,3:14:39.05:497,39,0	1/1:10,7:17:29.39:396,29,0	1/1:6,4:10:16.82:217,17,0	1/1:13,5:18:24.01:287,24,0	1/1:11,4:15:18.06:259,18,0	1/1:11,7:18:33.11:474,33,0	1/1:20,10:30:63.20:903,63,0	1/1:11,5:16:17.13:376,17,0
chr10	81053335	.	TTTTTC	T	3702.97	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.015;DP=530;FS=6.397;HRun=0;HaplotypeScore=115.4667;InbreedingCoeff=0.9887;MQ=61.52;MQ0=2;MQRankSum=-0.403;QD=34.93;ReadPosRankSum=2.252;VQSLOD=2.9571;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:63.13:0,63,1735	0/0:11,0:11:27.01:0,27,697	0/0:31,0:22:31.95:0,32,487	0/0:24,0:19:12.01:0,12,340	0/0:24,0:24:54.19:0,54,1545	1/1:4,16:20:42.14:794,42,0	0/0:15,0:15:33.11:0,33,944	0/0:27,0:27:45.13:0,45,1094	1/1:4,13:17:36.12:680,36,0	0/0:29,0:29:63.04:0,63,1691	0/0:14,0:14:36.12:0,36,1001	1/1:6,9:15:18.06:322,18,0	0/0:9,0:9:24.08:0,24,593	0/0:15,0:15:30.10:0,30,819	0/0:27,0:26:63.22:0,63,1647	0/0:13,0:13:27.09:0,27,676	0/0:18,0:17:39.13:0,39,1089	0/0:10,0:10:24.08:0,24,637	0/0:15,0:15:30.10:0,30,824	0/0:29,0:29:63.21:0,63,1679	0/0:10,0:10:24.08:0,24,658	1/1:6,8:14:24.05:398,24,0	1/1:5,11:16:30.04:498,30,0	1/1:5,19:24:54.19:1011,54,0	0/0:19,0:19:36.12:0,36,974	0/0:16,0:16:35.84:0,36,813	0/0:25,0:24:51.01:0,51,1410	0/0:14,0:14:21.07:0,21,601
chr10	81054277	.	GTTTC	G	9252.86	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=1.493;DP=576;FS=4.143;HRun=0;HaplotypeScore=119.8313;InbreedingCoeff=0.9499;MQ=63.66;MQ0=4;MQRankSum=9.010;QD=27.06;ReadPosRankSum=5.079;VQSLOD=4.7390;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:18.92:0,19,237	1/1:4,9:13:24.08:388,24,0	0/0:23,0:21:5.35:0,5,264	0/0:19,0:15:9.03:0,9,188	1/1:5,25:29:69.16:1059,69,0	0/0:5,0:26:30.10:0,30,492	0/0:15,0:15:30.10:0,30,709	1/1:24,11:35:33.07:479,33,0	0/0:3,0:16:18.06:0,18,268	1/1:6,18:25:57.19:914,57,0	1/1:7,12:19:36.08:553,36,0	0/0:4,0:16:18.06:0,18,309	0/0:23,0:33:69.22:0,69,1182	0/0:16,0:18:33.10:0,33,490	1/1:9,11:20:27.09:436,27,0	1/1:5,6:11:15.05:242,15,0	1/1:14,15:29:39.12:630,39,0	1/1:7,10:19:36.10:537,36,0	1/1:7,8:15:27.04:330,27,0	1/1:8,22:30:66.06:933,66,0	1/1:2,7:9:18.06:291,18,0	0/0:6,0:17:33.11:0,33,527	0/0:3,0:26:18.46:0,18,245	0/0:8,0:8:6.02:0,6,121	1/1:3,14:16:36.07:552,36,0	1/1:6,16:22:48.14:749,48,0	1/1:6,25:31:56.11:916,56,0	1/1:5,9:14:14.91:242,15,0
chr10	81055074	.	CT	C	2082	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.854;DP=574;FS=3.582;HRun=6;HaplotypeScore=60.0427;InbreedingCoeff=0.9991;MQ=86.52;MQ0=0;MQRankSum=-1.811;QD=25.08;ReadPosRankSum=2.499;VQSLOD=3.7345;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,32:36:81.20:870,81,0	0/0:13,0:13:33.11:0,33,434	0/0:22,0:22:51.13:0,51,636	0/0:17,0:17:42.09:0,42,495	0/0:29,0:29:81.26:0,81,1052	0/0:19,0:19:57.19:0,57,749	0/0:15,0:15:45.13:0,45,577	0/0:29,0:29:78.25:0,78,1015	0/0:16,0:16:48.14:0,48,617	0/0:26,0:26:72.23:0,72,948	0/0:26,0:26:66.16:0,66,855	0/0:18,0:18:51.17:0,51,670	1/1:1,22:23:60.15:645,60,0	1/1:0,24:24:66.17:709,66,0	0/0:16,0:16:45.15:0,45,591	0/0:25,0:25:69.22:0,69,907	0/0:17,0:17:48.13:0,48,611	0/0:13,0:13:39.11:0,39,498	0/0:18,0:18:51.17:0,51,671	0/0:26,0:26:75.24:0,75,987	0/0:20,0:20:60.20:0,60,790	0/0:16,0:16:42.14:0,42,553	0/0:18,0:18:54.18:0,54,711	0/0:25,0:25:69.22:0,69,907	0/0:21,0:21:57.18:0,57,747	0/0:18,0:18:48.16:0,48,631	0/0:19,0:19:57.18:0,57,737	0/0:9,0:9:24.04:0,24,315
chr10	81057304	.	AGATTCCCTG	A	6337.68	PASS	AB=0.519;AC=11;AF=0.196;AN=56;BaseQRankSum=12.670;DP=610;FS=3.537;HRun=0;HaplotypeScore=173.4752;InbreedingCoeff=0.8656;MQ=83.03;MQ0=0;MQRankSum=-13.156;QD=51.11;ReadPosRankSum=2.792;VQSLOD=4.5161;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.30:0,87,4219	0/0:8,0:8:24.08:0,24,1190	0/0:21,0:21:60.01:0,60,2383	0/0:19,0:19:54.19:0,54,2464	0/0:21,0:21:60.19:0,60,2827	1/1:9,21:30:42.14:1269,42,0	0/0:22,0:22:63.22:0,63,2988	0/0:35,0:35:99:0,102,4602	0/1:2,25:27:82.66:1890,0,83	0/0:29,0:29:81.28:0,81,3786	0/0:15,0:15:45.15:0,45,2115	1/1:4,16:20:45.15:1404,45,0	0/0:23,0:23:69.24:0,69,3139	0/0:19,0:19:57.20:0,57,2660	0/0:19,0:19:57.20:0,57,2652	0/0:20,0:20:60.21:0,60,2876	0/0:23,0:23:69.24:0,69,3384	0/0:18,0:18:54.19:0,54,2591	0/0:25,0:25:75.26:0,75,3536	0/0:26,0:26:78.27:0,78,3620	0/0:30,0:30:90.31:0,90,4328	1/1:7,9:16:12.04:379,12,0	1/1:6,12:18:27.09:853,27,0	1/1:2,11:13:18.04:543,18,0	0/0:21,0:21:63.19:0,63,2882	0/0:30,0:30:90.31:0,90,4332	0/0:30,0:29:87.30:0,87,4210	0/0:3,0:3:9.03:0,9,435
chr10	81058270	.	CTT	C	5277.55	PASS	AB=0.654;AC=42;AF=0.750;AN=56;BaseQRankSum=5.019;DP=510;FS=5.125;HRun=14;HaplotypeScore=97.9233;InbreedingCoeff=0.8264;MQ=63.72;MQ0=7;MQRankSum=-1.416;QD=13.71;ReadPosRankSum=1.931;VQSLOD=4.1839;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:38:81.56:0,82,846	1/1:4,7:11:17.89:156,18,0	0/0:21,0:13:11.49:0,11,92	0/0:16,0:11:20.81:0,21,186	1/1:7,19:26:46.29:362,46,0	1/1:7,11:17:35.20:329,35,0	0/0:17,0:18:41.51:0,42,486	1/1:7,15:20:29.36:262,29,0	1/1:4,10:13:35.77:282,36,0	1/1:8,14:21:28.97:298,29,0	1/1:3,16:22:31.33:276,31,0	1/1:7,3:10:10.64:84,11,0	0/0:13,0:13:33.02:0,33,386	0/0:17,0:18:43.48:0,43,529	1/1:11,9:20:31.71:262,32,0	1/1:2,9:10:8.90:127,9,0	1/1:6,12:18:28.34:302,28,0	1/1:5,18:24:50.41:429,50,0	1/1:3,11:14:35.30:281,35,0	0/1:2,10:14:4.04:153,0,4	0/1:7,2:10:3.25:21,0,3	1/1:11,7:18:45.74:343,46,0	1/1:7,6:14:33.05:225,33,0	1/1:10,4:14:14.71:124,15,0	1/1:3,20:25:46.99:390,47,0	1/1:6,13:19:28.64:234,29,0	1/1:9,10:22:12.14:189,12,0	1/1:1,9:10:17.69:150,18,0
chr10	81058282	.	TTTC	T	2605.84	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-1.034;DP=505;FS=16.061;HRun=0;HaplotypeScore=123.1071;InbreedingCoeff=0.0331;MQ=55.40;MQ0=11;MQRankSum=0.143;QD=6.73;ReadPosRankSum=-0.436;VQSLOD=1.8047;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:60.39:0,60,924	1/1:8,0:8:6.90:36,7,0	0/0:17,0:9:5.24:0,5,34	0/0:14,0:8:18.03:0,18,162	1/1:23,1:23:21.26:160,21,0	1/1:20,1:20:26:393,26,0	0/0:16,0:15:41.74:0,42,540	0/1:20,0:18:33.69:116,0,34	1/1:16,1:15:38.32:386,38,0	0/1:18,0:17:17.70:18,0,36	0/1:24,0:23:46.55:125,0,47	1/1:14,0:13:19.69:152,20,0	0/0:17,0:17:37.98:0,38,404	0/0:16,0:16:32.75:0,33,465	0/1:16,0:16:38.83:45,0,39	0/1:14,0:13:12.87:13,0,27	0/1:15,0:16:5.55:27,0,6	0/1:29,0:28:14.23:14,0,69	0/1:17,0:16:48.25:89,0,48	0/1:16,0:16:43.37:68,0,43	0/1:10,0:9:13.25:13,0,37	1/1:21,1:20:49.74:397,50,0	1/1:18,0:18:42.82:382,43,0	1/1:11,1:12:21.06:140,21,0	1/1:24,0:23:0.92:104,1,0	0/1:19,0:18:52.09:78,0,52	0/1:16,0:15:22.93:23,0,81	0/1:12,0:12:10.90:11,0,15
chr10	81058283	.	TTC	T	2699.11	PASS	AB=0.966;AC=33;AF=0.589;AN=56;BaseQRankSum=2.954;DP=503;FS=30.944;HRun=0;HaplotypeScore=114.8405;InbreedingCoeff=0.0743;MQ=55.34;MQ0=11;MQRankSum=1.316;QD=6.70;ReadPosRankSum=3.415;VQSLOD=1.6936;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:34.81:0,35,668	1/1:7,1:8:12.14:70,12,0	0/1:17,0:9:4.85:16,0,5	0/0:14,0:8:16.41:0,16,105	1/1:22,2:23:28.49:206,28,0	1/1:20,0:19:30.76:270,31,0	0/0:16,0:15:37.42:0,37,406	0/1:19,1:18:22.61:116,0,23	1/1:17,0:15:38.20:277,38,0	0/1:17,0:16:16.98:59,0,17	0/1:24,0:23:18.65:158,0,19	1/1:12,1:12:19.66:132,20,0	0/0:17,0:17:37.75:0,38,313	0/0:16,0:16:30.73:0,31,316	0/1:15,1:16:10.52:96,0,11	0/1:14,0:13:15.30:20,0,15	1/1:16,0:16:14.70:96,15,0	0/1:29,0:28:44.97:59,0,45	0/1:18,1:18:55.34:117,0,55	0/1:17,0:17:39.89:83,0,40	0/1:7,3:9:15.71:23,0,16	1/1:22,0:20:49.76:336,50,0	1/1:18,0:18:42.83:308,43,0	1/1:11,0:11:21.05:113,21,0	1/1:24,0:23:19:124,19,0	0/1:18,1:18:47.63:107,0,48	0/1:16,0:15:37.87:65,0,38	0/1:12,0:12:4.93:36,0,5
chr10	81058285	.	CT	C	1062	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=1.017;DP=501;FS=0.000;HRun=14;HaplotypeScore=118.0910;InbreedingCoeff=0.7510;MQ=53.71;MQ0=11;MQRankSum=-4.093;QD=8.50;ReadPosRankSum=0.052;VQSLOD=2.4448;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,1:35:43.71:0,44,654	0/0:9,0:9:7.98:0,8,54	0/0:11,0:6:2.68:0,3,11	0/0:12,0:7:11.52:0,12,92	0/0:23,0:22:26.03:0,26,155	1/1:3,16:18:32.48:279,32,0	0/0:15,0:14:35.95:0,36,392	0/1:20,0:18:8.88:9,0,73	1/1:5,13:16:26.74:240,27,0	0/0:19,0:17:29.44:0,29,200	0/0:25,0:24:28.14:0,28,210	1/1:5,11:15:11.87:109,12,0	0/0:17,0:17:27:0,27,286	0/0:17,0:17:30.03:0,30,297	0/0:17,0:17:34.74:0,35,215	0/0:15,0:14:1.77:0,2,118	0/0:15,1:16:7.25:0,7,176	0/0:29,0:28:56.10:0,56,365	0/0:19,0:18:30.92:0,31,211	0/0:17,0:17:23.68:0,24,164	0/0:9,0:8:8.44:0,8,52	1/1:11,11:20:28.37:232,28,0	1/1:6,13:19:26.71:233,27,0	1/1:4,7:11:14.99:141,15,0	0/0:23,1:23:1.29:0,1,237	0/0:19,0:18:20.34:0,20,116	0/0:16,0:15:34.51:0,35,217	0/0:12,0:12:14.84:0,15,102
chr10	81059144	.	C	CTT	1755.50	PASS	AB=0.833;AC=28;AF=0.500;AN=56;BaseQRankSum=2.462;DP=320;FS=7.396;HRun=0;HaplotypeScore=135.6443;InbreedingCoeff=0.0039;MQ=30.05;MQ0=46;MQRankSum=-0.368;QD=9.75;ReadPosRankSum=1.768;VQSLOD=2.8799;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,2:8:21.61:76,0,22	1/1:0,1:1:3.01:47,3,0	0/0:55,0:5:0.04:0,0,84	0/0:48,0:4:1.26:0,1,34	0/1:6,5:11:2.89:10,0,3	0/1:8,0:8:0.85:1,0,9	0/0:5,0:5:11.62:0,12,67	1/1:13,2:12:19.04:181,19,0	0/1:7,0:5:1.75:3,0,2	0/1:6,5:8:42.11:236,0,42	1/1:2,4:6:4.19:20,4,0	0/0:12,0:10:7.20:0,7,53	1/1:4,5:9:15.04:199,15,0	1/1:1,5:5:15.05:219,15,0	0/1:6,2:6:27.31:67,0,27	0/1:4,2:5:6.96:102,0,7	1/1:4,1:4:1.23:33,1,0	0/0:4,0:1:2.22:0,2,7	0/1:10,1:9:7.88:65,0,8	0/1:9,3:11:7.12:7,0,56	0/0:3,0:3:2.37:0,2,8	1/1:7,0:7:6.32:42,6,0	0/1:10,0:10:9.85:22,0,10	0/0:6,0:3:2.83:0,3,14	0/0:4,3:5:0.24:0,0,1	1/1:4,8:9:11.21:327,11,0	0/1:8,3:9:14.19:38,0,14	0/1:10,5:11:41.95:208,0,42
chr10	81059146	.	C	CTTT	1160.99	PASS	AB=0.963;AC=23;AF=0.411;AN=56;BaseQRankSum=2.900;DP=311;FS=14.788;HRun=0;HaplotypeScore=140.9962;InbreedingCoeff=0.2389;MQ=30.26;MQ0=42;MQRankSum=-1.200;QD=9.29;ReadPosRankSum=-3.253;VQSLOD=2.0062;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:7:21.33:21,0,35	0/0:1,0:1:0:0,0,0	0/0:55,0:5:12.01:0,12,119	0/0:48,0:4:1.01:0,1,38	0/1:11,0:11:13.37:13,0,14	1/1:2,6:8:9.02:120,9,0	0/0:7,0:7:11.86:0,12,130	0/0:14,0:12:8.43:0,8,70	1/1:3,5:6:12.04:253,12,0	0/0:11,0:8:2.45:0,2,56	0/0:6,0:6:2.22:0,2,29	0/1:6,6:10:25.80:313,0,26	0/1:9,0:9:0.29:0,0,1	1/1:6,0:5:11.76:55,12,0	0/1:8,0:6:14.60:27,0,15	0/1:6,0:5:0.89:13,0,1	0/1:5,0:4:3.91:4,0,49	0/0:3,0:1:2.88:0,3,15	0/0:11,0:9:22.26:0,22,175	0/1:12,0:11:2.73:3,0,74	1/1:3,0:3:2.88:15,3,0	1/1:3,2:5:12.04:243,12,0	1/1:4,3:7:17.77:198,18,0	1/1:5,0:2:3.01:39,3,0	0/0:7,0:5:1.17:0,1,13	0/1:12,0:9:2.15:2,0,12	0/0:10,0:8:5.49:0,5,33	0/0:12,0:11:10.46:0,10,76
chr10	81059147	.	C	CTT	3758.99	PASS	AB=0.882;AC=34;AF=0.607;AN=56;BaseQRankSum=6.469;DP=349;FS=5.249;HRun=0;HaplotypeScore=185.0071;InbreedingCoeff=0.0546;MQ=32.93;MQ0=41;MQRankSum=-0.305;QD=16.63;ReadPosRankSum=1.229;VQSLOD=3.5225;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,2:11:34.50:178,0,35	1/1:0,1:1:3.01:51,3,0	0/0:55,0:5:12:0,12,111	0/0:49,0:5:1.08:0,1,31	1/1:8,5:13:14.80:159,15,0	0/1:8,0:8:3.55:4,0,7	0/0:7,0:7:14.80:0,15,124	0/1:13,2:13:20.04:156,0,20	1/1:9,0:7:9.71:38,10,0	0/1:10,5:12:34.71:389,0,35	1/1:4,4:8:17.60:187,18,0	0/1:12,0:10:13.38:13,0,17	1/1:8,5:13:27.09:397,27,0	1/1:1,5:5:15.05:250,15,0	0/1:6,2:6:11.17:97,0,11	1/1:8,2:9:14.18:286,14,0	0/1:4,1:4:38.07:47,0,38	0/1:4,0:2:2.99:3,0,5	0/1:10,1:9:40.65:82,0,41	0/1:15,4:18:50.16:263,0,50	0/1:4,0:4:0:0,0,0	1/1:5,0:5:8.32:31,8,0	0/0:6,0:6:1.03:0,1,9	0/0:6,0:3:2.37:0,2,8	1/1:4,3:5:6.91:77,7,0	1/1:8,8:13:26.06:550,26,0	1/1:9,3:10:14.40:226,14,0	0/1:8,5:12:72.38:275,0,72
chr10	81059296	.	AC	A	856.50	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=6.621;DP=374;FS=0.640;HRun=5;HaplotypeScore=98.3381;InbreedingCoeff=0.7686;MQ=90.01;MQ0=0;MQRankSum=-5.992;QD=17.84;ReadPosRankSum=1.163;VQSLOD=2.9998;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:22:54.03:497,54,0	0/1:7,0:7:14.11:14,0,51	0/0:19,0:19:19.08:0,19,432	0/0:17,0:17:37.48:0,37,280	0/0:11,0:11:16.55:0,17,97	0/0:20,0:20:30.18:0,30,150	0/0:12,0:12:13.76:0,14,81	0/0:24,0:24:59.54:0,60,385	0/0:15,0:15:27.31:0,27,146	0/0:8,0:8:21.74:0,22,145	0/0:4,0:4:11.50:0,12,59	0/0:13,0:13:11.08:0,11,77	1/1:1,8:9:22:221,22,0	1/1:0,10:10:29.98:272,30,0	0/0:16,0:16:36.09:0,36,189	0/0:11,0:11:17.61:0,18,89	0/0:23,0:23:41.42:0,41,204	0/0:11,0:11:25.51:0,26,114	0/0:20,0:20:42.91:0,43,195	0/0:11,0:11:12.87:0,13,124	0/0:11,0:11:18.17:0,18,91	0/0:11,0:11:19.57:0,20,95	0/0:16,0:16:36.51:0,37,199	0/0:5,0:5:6.47:0,6,37	0/0:8,0:8:15.64:0,16,100	0/0:13,0:13:31.38:0,31,184	0/0:16,0:16:37.28:0,37,226	0/0:11,0:11:27.87:0,28,127
chr10	81059461	.	C	CT	5163.22	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-4.495;DP=488;FS=0.778;HRun=6;HaplotypeScore=58.7791;InbreedingCoeff=0.9921;MQ=74.38;MQ0=0;MQRankSum=-0.807;QD=32.89;ReadPosRankSum=2.234;VQSLOD=5.1030;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:45.14:566,45,0	0/0:7,0:7:21.05:0,21,214	0/0:12,0:11:30.05:0,30,296	0/0:14,0:12:10.74:0,11,215	0/0:30,0:30:78.17:0,78,795	1/1:4,21:25:57.18:717,57,0	0/0:11,0:11:33.08:0,33,337	0/0:31,0:31:81.15:0,81,808	1/1:0,16:16:45.14:566,45,0	0/0:16,0:16:33.06:0,33,332	0/0:16,0:16:42.10:0,42,428	1/1:1,10:11:30.09:372,30,0	1/1:1,18:19:51.16:641,51,0	1/1:0,25:25:66.21:830,66,0	0/0:14,0:14:36.07:0,36,361	0/0:13,0:13:36.08:0,36,367	0/0:24,0:24:63.14:0,63,643	0/0:11,0:11:30.06:0,30,306	0/0:17,0:17:45.09:0,45,453	0/0:19,0:19:54.12:0,54,550	0/0:16,0:16:42.09:0,42,428	1/1:1,11:12:27.09:340,27,0	1/1:2,22:24:66.21:829,66,0	1/1:0,8:8:24.08:302,24,0	0/0:14,0:14:39.09:0,39,398	0/0:20,0:20:51.10:0,51,513	0/0:31,0:31:81.07:0,81,794	0/0:15,0:15:39.09:0,39,398
chr10	81059997	.	A	ACG	11371.73	PASS	AB=0.950;AC=36;AF=0.643;AN=56;BaseQRankSum=-0.260;DP=650;FS=6.368;HRun=0;HaplotypeScore=161.7418;InbreedingCoeff=0.3189;MQ=60.46;MQ0=5;MQRankSum=4.306;QD=22.04;ReadPosRankSum=4.771;VQSLOD=5.1442;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:38.85:0,39,302	1/1:4,10:14:15.12:396,15,0	0/0:14,0:9:0.25:0,0,84	0/0:11,0:7:5.95:0,6,58	1/1:5,14:19:27.09:452,27,0	0/1:27,0:27:99:186,0,214	0/0:34,0:34:83.42:0,83,1071	0/1:25,0:25:7.44:318,0,7	0/1:17,0:17:99:105,0,177	1/1:7,36:43:59.75:1314,60,0	1/1:3,20:23:9.37:464,9,0	0/1:14,0:14:64.65:128,0,65	0/0:28,0:28:53.73:0,54,410	0/0:20,0:20:28.85:0,29,237	1/1:1,16:17:30.10:506,30,0	0/1:3,6:9:9.88:194,0,10	1/1:12,20:32:72.85:1255,73,0	1/1:6,30:36:63.21:1095,63,0	1/1:2,12:14:21.83:572,22,0	1/1:8,16:24:33.04:546,33,0	1/1:3,32:35:48.20:937,48,0	0/1:21,0:21:75.88:76,0,178	0/1:24,0:24:99:103,0,207	0/1:40,0:38:99:197,0,397	1/1:14,9:23:46.96:687,47,0	1/1:2,15:17:39.63:655,40,0	1/1:6,15:21:20.15:425,20,0	1/1:10,10:21:56.97:761,57,0
chr10	81059999	.	G	GCA	7396.13	PASS	AB=0.854;AC=34;AF=0.607;AN=56;BaseQRankSum=1.462;DP=644;FS=3.575;HRun=0;HaplotypeScore=175.8235;InbreedingCoeff=0.0541;MQ=60.40;MQ0=5;MQRankSum=3.170;QD=14.01;ReadPosRankSum=3.654;VQSLOD=4.9333;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:26:20.89:0,21,105	0/1:12,0:13:8.45:193,0,8	0/0:13,0:8:4.79:0,5,40	0/1:12,0:8:10.30:19,0,10	1/1:15,0:19:26.55:265,27,0	0/1:12,16:28:49.53:501,0,50	0/0:30,0:33:52.23:0,52,650	0/1:12,0:25:45.42:53,0,45	0/1:7,8:15:28.91:293,0,29	1/1:39,0:41:1.18:532,1,0	0/1:24,0:24:32.74:245,0,33	1/1:8,6:14:17.74:336,18,0	0/0:10,0:26:28.41:0,28,139	0/0:6,0:17:16.70:0,17,79	1/1:17,0:18:29.28:289,29,0	0/1:9,0:10:9.45:112,0,9	1/1:29,0:31:34.80:633,35,0	1/1:35,0:36:63.07:603,63,0	1/1:14,0:14:32.26:303,32,0	1/1:22,0:24:33.08:361,33,0	1/1:35,0:35:3.70:452,4,0	0/1:9,14:23:16.25:214,0,16	0/1:11,14:26:21.41:297,0,21	0/1:21,18:37:99:544,0,118	0/1:22,0:23:21.44:249,0,21	0/1:18,0:18:18.50:291,0,19	1/1:19,0:21:29.42:277,29,0	1/1:19,0:19:33.06:335,33,0
chr10	81061912	.	TACACACACACACAC	T	1478.09	PASS	AB=0.857;AC=13;AF=0.271;AN=48;BaseQRankSum=-0.064;DP=376;FS=2.534;HRun=0;HaplotypeScore=173.2279;InbreedingCoeff=0.6001;MQ=47.12;MQ0=16;MQRankSum=-2.499;QD=27.89;ReadPosRankSum=1.913;VQSLOD=3.1435;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:13:6.02:195,6,0	0/0:6,0:6:9.03:0,9,318	./.	./.	0/0:21,0:21:20.89:0,21,393	1/1:4,8:12:15.05:590,15,0	0/0:11,0:10:21.07:0,21,964	0/0:43,0:39:34.76:0,35,1163	1/1:2,4:6:12.04:414,12,0	0/0:14,0:14:30.10:0,30,1045	0/0:15,0:15:9.01:0,9,157	./.	1/1:1,0:4:3.01:98,3,0	1/1:5,0:7:3.01:98,3,0	0/0:9,0:9:3.01:0,3,146	0/0:5,0:5:3.01:0,3,59	0/0:18,0:18:11.33:0,11,277	0/0:14,0:12:12.04:0,12,456	0/0:20,0:19:15.39:0,15,703	0/0:21,0:21:0.46:0,0,1	0/0:10,0:9:0:0,0,0	1/1:3,2:5:3.01:118,3,0	0/1:5,1:6:89.01:112,0,89	./.	0/0:12,0:12:15.05:0,15,318	0/0:13,0:13:30.10:0,30,938	0/0:22,0:22:36.12:0,36,995	0/0:10,0:10:14.07:0,14,459
chr10	81061930	.	C	CATAT	4519.43	PASS	AB=0.880;AC=21;AF=0.375;AN=56;BaseQRankSum=-5.468;DP=351;FS=0.637;HRun=0;HaplotypeScore=119.2419;InbreedingCoeff=-0.0205;MQ=44.18;MQ0=18;MQRankSum=0.552;QD=17.05;ReadPosRankSum=0.587;VQSLOD=4.6814;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:7:5.87:0,6,35	0/1:6,0:6:25.42:138,0,25	0/1:20,0:4:0.24:2,0,0	0/0:27,0:5:8.81:0,9,121	1/1:13,8:20:29.95:405,30,0	0/0:12,0:12:21.03:0,21,220	0/0:11,0:9:27.08:0,27,442	0/1:51,0:47:99:932,0,395	0/0:6,0:6:12.02:0,12,121	0/1:10,2:12:51.49:367,0,51	0/1:9,5:14:4.96:208,0,5	0/0:2,0:2:2.99:0,3,24	0/0:3,0:3:2.90:0,3,16	0/0:3,0:3:2.57:0,3,16	1/1:2,1:3:6.02:125,6,0	0/1:3,3:6:22.87:46,0,23	1/1:15,2:17:6.29:235,6,0	0/1:9,2:9:15.04:280,0,15	0/1:22,1:22:86.75:275,0,87	0/1:14,3:17:48.59:109,0,49	0/1:7,0:6:0.01:0,0,0	0/0:5,0:5:6.02:0,6,74	0/0:5,0:5:12.03:0,12,144	0/0:4,0:3:2.99:0,3,44	1/1:10,2:12:20.89:289,21,0	0/1:12,1:13:36.50:283,0,37	0/1:15,5:20:21.98:653,0,22	0/1:9,3:12:57.67:170,0,58
chr10	81061940	.	C	CACACATAT	4064.51	PASS	AB=0.962;AC=23;AF=0.442;AN=52;BaseQRankSum=1.052;DP=303;FS=1.506;HRun=0;HaplotypeScore=133.9014;InbreedingCoeff=-0.0165;MQ=51.71;MQ0=20;MQRankSum=-2.940;QD=16.07;ReadPosRankSum=1.169;VQSLOD=2.9389;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:7:6.02:0,6,100	0/0:4,0:4:9.03:0,9,121	0/1:15,0:4:6.58:7,0,72	0/1:24,0:5:36.60:52,0,37	0/1:14,3:17:9.60:208,0,10	0/0:10,0:10:18.06:0,18,321	0/0:10,0:8:18.03:0,18,338	0/1:44,0:40:83.55:569,0,84	0/0:4,0:4:12.04:0,12,207	0/1:10,1:12:97.53:389,0,98	0/1:9,1:10:10.39:192,0,10	./.	0/0:4,0:4:6.02:0,6,98	0/0:3,0:3:6.02:0,6,97	1/1:2,0:2:3.01:113,3,0	1/1:5,0:5:6:110,6,0	0/1:17,0:17:76.49:144,0,76	0/1:10,0:8:23.57:317,0,24	0/1:22,0:22:60.85:378,0,61	1/1:13,1:14:5.90:40,6,0	1/1:7,0:6:4.20:22,4,0	0/0:3,0:2:3.01:0,3,58	0/0:2,0:2:3.90:0,4,60	./.	0/1:11,0:11:42.82:139,0,43	0/1:11,0:11:99:303,0,116	1/1:17,0:18:35.17:686,35,0	1/1:12,0:12:19.19:393,19,0
chr10	81061942	.	C	CACATAT	1782.33	PASS	AB=0.953;AC=15;AF=0.288;AN=52;BaseQRankSum=3.350;DP=294;FS=1.520;HRun=0;HaplotypeScore=132.6121;InbreedingCoeff=-0.2703;MQ=54.42;MQ0=17;MQRankSum=-5.078;QD=9.33;ReadPosRankSum=4.023;VQSLOD=2.2049;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:7:6.02:0,6,77	0/0:4,0:4:9.03:0,9,124	0/0:14,0:4:11.66:0,12,98	0/0:20,0:6:13.32:0,13,102	0/1:16,1:16:8.57:153,0,9	0/0:10,0:10:14.47:0,14,172	0/0:10,0:8:17.90:0,18,300	0/1:43,0:39:88.74:89,0,473	0/0:4,0:4:9.02:0,9,103	0/1:12,0:12:99:182,0,122	0/1:6,2:9:36.39:98,0,36	./.	0/0:4,0:4:6.02:0,6,84	0/0:3,0:3:6.02:0,6,82	1/1:2,0:2:3.01:81,3,0	0/1:4,1:5:3.19:58,0,3	0/1:17,0:17:81.42:81,0,123	0/1:10,0:8:49.30:243,0,49	0/1:22,0:22:99:141,0,178	0/0:13,1:14:5.26:0,5,25	0/0:7,0:6:5.84:0,6,42	0/0:3,0:2:3.01:0,3,35	0/1:2,0:2:15.24:15,0,29	./.	0/1:11,0:11:67.21:79,0,67	0/1:11,0:11:99:129,0,123	0/1:15,0:18:9.63:385,0,10	0/1:12,0:12:34.61:194,0,35
chr10	81061944	.	C	CATAT	727.05	PASS	AB=0.873;AC=14;AF=0.269;AN=52;BaseQRankSum=4.529;DP=285;FS=2.904;HRun=0;HaplotypeScore=124.8873;InbreedingCoeff=-0.2777;MQ=54.80;MQ0=17;MQRankSum=-3.224;QD=5.12;ReadPosRankSum=2.386;VQSLOD=2.6105;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:7:6:0,6,50	0/0:4,0:4:9.03:0,9,111	0/0:14,0:4:11.68:0,12,109	0/0:19,0:6:14.60:0,15,152	0/1:12,4:15:9.02:59,0,9	0/0:10,0:10:13.24:0,13,133	0/0:10,0:8:18.04:0,18,293	0/0:41,0:37:65.06:0,65,959	0/0:4,0:4:8.46:0,8,81	0/1:11,1:12:74.22:74,0,219	0/1:8,2:10:22.59:23,0,46	./.	0/0:4,0:4:6:0,6,61	0/0:3,0:3:6:0,6,61	1/1:1,1:2:3.01:55,3,0	0/1:3,2:5:25.12:25,0,28	0/1:14,2:16:41.68:42,0,97	0/1:8,2:8:67.38:155,0,67	0/1:19,1:20:14.78:15,0,389	0/0:13,1:14:6.02:0,6,76	0/0:7,0:6:6.02:0,6,73	0/0:3,0:2:3:0,3,28	0/1:2,0:2:16.14:16,0,22	./.	0/1:7,2:9:22.92:23,0,71	0/1:10,1:11:51.89:52,0,183	0/1:17,0:17:94.12:224,0,94	0/1:9,3:12:99:109,0,101
chr10	81061952	.	C	CACACAT	3616.51	PASS	AB=1.000;AC=38;AF=0.731;AN=52;BaseQRankSum=-4.467;DP=241;FS=0.000;HRun=0;HaplotypeScore=112.5539;InbreedingCoeff=0.1853;MQ=60.47;MQ0=9;MQRankSum=-1.323;QD=16.82;ReadPosRankSum=-2.795;VQSLOD=2.4597;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:11:15.99:16,0,42	0/1:3,0:3:14.08:18,0,14	0/1:12,0:4:3.13:3,0,28	0/0:15,0:7:14:0,14,82	1/1:6,4:11:11.97:187,12,0	0/1:10,0:10:4.02:4,0,104	0/0:7,0:5:4.76:0,5,184	1/1:39,0:35:88.47:648,88,0	0/1:5,0:5:3:3,0,93	1/1:7,1:8:24.03:327,24,0	1/1:8,2:11:14.76:159,15,0	./.	0/1:4,0:4:18.38:19,0,18	0/1:4,0:4:15.35:40,0,15	1/1:0,1:1:3.01:87,3,0	1/1:3,1:4:6.01:93,6,0	1/1:13,2:15:14.71:140,15,0	1/1:6,1:7:11.90:165,12,0	1/1:16,1:17:30.12:283,30,0	1/1:7,0:7:5.99:48,6,0	1/1:4,0:4:2.99:24,3,0	0/0:3,0:2:3:0,3,25	0/1:2,0:2:19.28:41,0,19	./.	1/1:4,2:6:9.02:128,9,0	1/1:6,1:7:20.98:275,21,0	1/1:12,0:15:36:578,36,0	1/1:8,3:11:20.97:329,21,0
chr10	81062062	.	T	TTA	5097.87	PASS	AB=1.000;AC=35;AF=0.761;AN=46;BaseQRankSum=-2.471;DP=166;FS=0.000;HRun=0;HaplotypeScore=42.6481;InbreedingCoeff=0.6513;MQ=70.58;MQ0=0;MQRankSum=-3.474;QD=36.94;ReadPosRankSum=-2.429;VQSLOD=5.4530;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:11:30.10:510,30,0	1/1:2,3:5:12.04:190,12,0	./.	0/1:7,0:6:2.47:2,0,27	1/1:0,4:4:12.04:203,12,0	0/0:13,0:13:27.06:0,27,323	0/0:3,0:3:6.02:0,6,78	1/1:21,19:40:84.28:1383,84,0	0/0:5,0:5:9.03:0,9,117	1/1:1,2:3:9.03:140,9,0	1/1:2,7:9:24.08:392,24,0	0/0:2,0:2:6.02:0,6,78	1/1:0,3:3:9.03:153,9,0	1/1:1,5:6:12.04:204,12,0	1/1:0,1:1:3.01:51,3,0	./.	1/1:2,5:7:15.05:255,15,0	1/1:2,2:4:6.02:88,6,0	1/1:4,10:14:30.10:510,30,0	1/1:1,1:2:3.01:51,3,0	./.	./.	0/0:1,0:1:3.01:0,3,39	./.	1/1:1,6:7:18.06:305,18,0	1/1:1,1:2:6.02:101,6,0	1/1:1,4:5:9.03:153,9,0	1/1:0,8:8:24.08:408,24,0
chr10	81062094	.	GT	G	3853.64	PASS	AB=1.000;AC=43;AF=0.796;AN=54;BaseQRankSum=5.537;DP=202;FS=3.715;HRun=6;HaplotypeScore=50.1892;InbreedingCoeff=0.7339;MQ=88.24;MQ0=0;MQRankSum=-6.315;QD=24.39;ReadPosRankSum=-0.559;VQSLOD=2.9046;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.12:0,51,651	1/1:0,3:3:9.02:97,9,0	0/1:12,0:12:0.05:0,0,311	0/0:8,0:8:24.07:0,24,306	1/1:0,10:10:18.05:193,18,0	1/1:0,9:9:27.07:290,27,0	0/0:3,0:3:9.03:0,9,118	1/1:9,21:30:66.16:708,66,0	1/1:1,2:3:6.02:64,6,0	1/1:1,3:4:9.02:97,9,0	1/1:0,11:11:33.08:354,33,0	1/1:1,2:3:6.01:64,6,0	0/0:5,0:5:12.04:0,12,158	0/0:9,0:9:24.08:0,24,316	1/1:0,2:2:6.02:64,6,0	1/1:0,1:1:3.01:32,3,0	1/1:0,4:4:12.03:129,12,0	1/1:1,4:5:9.02:97,9,0	1/1:6,14:20:48.11:508,48,0	1/1:0,8:8:24.06:257,24,0	1/1:0,4:4:12.03:127,12,0	1/1:0,3:3:9.02:96,9,0	1/1:0,5:5:15.04:161,15,0	./.	1/1:1,5:6:15.04:161,15,0	1/1:0,6:6:18.05:193,18,0	1/1:2,0:2:3.01:31,3,0	1/1:3,4:7:12.02:129,12,0
chr10	81062134	.	C	CCT	9435.64	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=2.187;DP=316;FS=1.277;HRun=0;HaplotypeScore=62.1340;InbreedingCoeff=0.9243;MQ=90.35;MQ0=0;MQRankSum=-6.117;QD=41.38;ReadPosRankSum=0.873;VQSLOD=6.2801;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:45.15:0,45,603	1/1:0,6:6:15.05:263,15,0	0/0:20,0:19:20.19:0,20,436	0/0:21,0:19:50.07:0,50,586	1/1:0,11:11:27.09:472,27,0	1/1:3,10:13:30.10:525,30,0	0/0:8,0:8:21.07:0,21,283	1/1:5,39:44:99:2040,120,0	1/1:0,6:6:15.05:263,15,0	1/1:1,4:5:12.04:210,12,0	1/1:1,12:13:30.10:524,30,0	1/1:3,9:12:24.07:373,24,0	0/0:7,0:7:21.07:0,21,284	0/0:12,0:12:30.10:0,30,405	1/1:1,4:5:9.03:157,9,0	1/1:0,6:6:9.03:157,9,0	1/1:1,7:8:15.05:263,15,0	1/1:2,6:8:15.05:263,15,0	1/1:2,20:22:60.16:947,60,0	1/1:0,14:14:42.14:721,42,0	1/1:2,3:5:12.04:210,12,0	1/1:0,7:7:18.06:315,18,0	1/1:0,8:8:18.06:315,18,0	1/1:1,3:4:9.03:158,9,0	1/1:0,6:6:15.05:262,15,0	1/1:0,9:9:27.09:473,27,0	1/1:0,4:5:12.04:210,12,0	1/1:0,11:11:18.06:315,18,0
chr10	81062259	.	G	GT	1571.94	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.833;DP=376;FS=2.824;HRun=7;HaplotypeScore=98.1591;InbreedingCoeff=0.8539;MQ=63.60;MQ0=1;MQRankSum=-0.278;QD=25.77;ReadPosRankSum=3.096;VQSLOD=3.9686;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,18:23:45.10:527,45,0	0/0:4,0:4:12.02:0,12,116	0/0:7,0:7:14.11:0,14,106	0/0:13,1:11:21.02:0,21,200	0/0:18,0:18:29.12:0,29,316	0/0:15,0:15:42.07:0,42,405	0/0:15,0:15:30.04:0,30,289	0/0:32,0:32:87.12:0,87,871	0/0:10,0:10:17.93:0,18,174	0/0:15,0:15:29.96:0,30,298	0/0:11,0:11:27.03:0,27,259	0/0:15,0:15:30.03:0,30,290	1/1:7,13:20:51.10:571,51,0	1/1:1,17:18:51.16:616,51,0	0/0:7,0:7:9.01:0,9,87	0/0:8,0:8:6:0,6,58	0/0:18,0:18:27.02:0,27,254	0/0:8,0:8:9.01:0,9,87	0/0:24,0:24:60.09:0,60,579	0/0:11,0:11:24.04:0,24,232	0/0:8,0:8:6:0,6,58	0/0:7,0:7:15.02:0,15,145	0/0:14,0:14:36.06:0,36,347	0/0:11,0:11:18.03:0,18,173	0/0:7,0:7:18.03:0,18,174	0/0:10,0:10:27.03:0,27,261	0/0:13,0:13:12.01:0,12,116	0/0:11,0:11:27.04:0,27,261
chr10	81062282	.	C	CT	4187.37	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=5.145;DP=372;FS=4.030;HRun=8;HaplotypeScore=97.1165;InbreedingCoeff=0.7835;MQ=59.32;MQ0=2;MQRankSum=-5.302;QD=13.29;ReadPosRankSum=2.484;VQSLOD=3.5076;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,18:28:21.48:484,21,0	1/1:0,3:3:9.03:104,9,0	0/0:20,0:11:14.73:0,15,121	0/0:22,0:12:12.93:0,13,180	1/1:13,0:13:19.90:138,20,0	1/1:10,0:15:19.10:88,19,0	0/0:15,0:15:38.99:0,39,347	1/1:20,0:20:35.95:366,36,0	1/1:7,0:9:6.09:28,6,0	1/1:14,0:14:29.81:261,30,0	1/1:10,0:10:23.78:190,24,0	1/1:13,0:16:14.55:71,15,0	1/1:10,10:20:14.17:422,14,0	1/1:8,8:16:39.08:424,39,0	1/1:8,0:8:14.75:94,15,0	1/1:8,0:8:8.83:54,9,0	1/1:15,0:15:17.65:107,18,0	1/1:8,0:8:5.88:36,6,0	1/1:9,11:18:33.03:350,33,0	1/1:7,2:9:20.75:157,21,0	1/1:9,0:9:14.86:108,15,0	1/1:5,0:7:8.51:35,9,0	1/1:10,0:16:28.52:131,29,0	1/1:3,0:8:14.68:70,15,0	1/1:6,0:6:14.78:103,15,0	1/1:13,0:13:32.05:246,32,0	1/1:14,0:13:12.22:84,12,0	1/1:8,0:8:5.88:36,6,0
chr10	81062284	.	T	TTTTTTTTC	13579.40	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=-4.266;DP=400;FS=4.554;HRun=0;HaplotypeScore=113.3309;InbreedingCoeff=0.4349;MQ=57.78;MQ0=2;MQRankSum=-3.565;QD=39.59;ReadPosRankSum=-0.914;VQSLOD=4.4512;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:77.10:77,0,285	1/1:4,0:4:12.04:191,12,0	0/0:20,0:11:15.03:0,15,223	0/0:22,0:12:14.75:0,15,392	1/1:2,12:17:23.82:502,24,0	1/1:17,0:16:23.65:710,24,0	0/0:15,0:15:33.53:0,34,840	1/1:5,15:22:48.16:1049,48,0	1/1:9,0:9:5.74:179,6,0	1/1:0,14:16:33.11:840,33,0	1/1:0,10:11:24.08:890,24,0	1/1:16,0:15:18.92:456,19,0	0/1:20,0:20:59.18:59,0,313	0/1:16,0:16:99:109,0,171	1/1:0,8:10:15.05:631,15,0	1/1:1,7:10:9.03:379,9,0	1/1:5,12:18:21.07:883,21,0	1/1:1,6:8:6.02:253,6,0	1/1:17,0:15:42.51:712,43,0	1/1:2,6:11:21.03:736,21,0	1/1:1,9:10:15.05:625,15,0	0/1:8,0:8:9.72:182,0,10	1/1:15,0:17:16.41:774,16,0	1/1:9,0:9:18.05:468,18,0	1/1:2,5:8:15.05:628,15,0	1/1:2,11:16:42.12:1185,42,0	1/1:3,11:15:20.99:812,21,0	1/1:4,4:8:6.02:253,6,0
chr10	81062289	.	TTC	T	694.29	PASS	AB=0.968;AC=18;AF=0.321;AN=56;BaseQRankSum=-1.653;DP=384;FS=10.519;HRun=0;HaplotypeScore=110.8821;InbreedingCoeff=0.2570;MQ=55.95;MQ0=3;MQRankSum=0.546;QD=3.44;ReadPosRankSum=-3.394;VQSLOD=0.2246;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,1:26:8.09:8,0,246	0/0:4,0:4:11.19:0,11,55	0/0:18,0:9:14.07:0,14,92	0/0:22,0:12:20.29:0,20,171	0/1:14,0:14:2.41:2,0,53	1/1:13,1:13:7.59:109,8,0	0/0:16,0:16:44.53:0,45,558	0/1:16,0:16:40.40:80,0,40	1/1:3,7:10:9.83:95,10,0	0/1:16,0:16:40.08:40,0,92	0/0:12,0:11:12.53:0,13,105	1/1:13,3:15:17.13:133,17,0	0/0:17,3:20:22.02:0,22,284	0/1:12,3:15:46.92:47,0,112	0/0:12,0:12:20.50:0,20,131	0/0:9,0:9:11.78:0,12,77	0/0:18,0:18:28.52:0,29,190	0/0:8,0:8:5.79:0,6,34	0/1:17,0:15:26.16:26,0,96	0/0:11,0:11:16.08:0,16,83	0/0:10,0:10:12.73:0,13,63	1/1:7,2:9:18.25:144,18,0	1/1:14,3:17:4.43:114,4,0	0/0:9,0:9:1.01:0,1,5	0/0:9,0:9:16.69:0,17,100	0/1:15,0:15:44.95:45,0,86	0/1:16,1:16:23.78:24,0,93	0/0:4,0:4:5.88:0,6,35
chr10	81062291	.	CT	C	150.12	PASS	AB=0.847;AC=12;AF=0.214;AN=56;BaseQRankSum=3.112;DP=380;FS=3.723;HRun=11;HaplotypeScore=109.8187;InbreedingCoeff=0.5122;MQ=54.35;MQ0=4;MQRankSum=-2.668;QD=1.31;ReadPosRankSum=1.554;VQSLOD=-0.3705;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:39.90:0,40,384	0/0:4,0:4:11.74:0,12,81	1/1:16,2:9:5.90:47,6,0	0/1:19,2:11:24.84:38,0,25	0/0:16,0:16:19.93:0,20,153	1/1:11,2:12:12.97:52,13,0	0/0:14,1:15:17.46:0,17,391	0/0:15,0:15:18:0,18,171	0/1:9,1:10:2.15:3,0,2	0/0:16,0:16:22.66:0,23,192	0/0:12,0:11:22.17:0,22,186	1/1:10,6:15:6.93:40,7,0	0/0:17,1:19:23.30:0,23,324	0/0:15,0:15:22.30:0,22,222	0/0:12,0:12:21:0,21,198	0/0:9,0:9:12.02:0,12,118	0/0:18,0:18:30.94:0,31,301	0/0:7,0:7:6.01:0,6,58	0/0:15,0:12:23.61:0,24,181	0/0:12,0:12:7.02:0,7,150	0/0:9,0:9:12.81:0,13,96	1/1:7,3:10:6.52:34,7,0	0/1:14,3:17:25.09:83,0,25	0/1:6,4:10:4.24:4,0,7	0/0:9,0:9:16.27:0,16,149	0/0:15,0:15:14.46:0,14,261	0/0:17,0:16:8.91:0,9,201	0/0:4,0:4:6.01:0,6,57
chr10	81062292	.	T	TTTTTTC	7510.70	PASS	AB=0.953;AC=29;AF=0.518;AN=56;BaseQRankSum=1.444;DP=379;FS=0.000;HRun=0;HaplotypeScore=114.2165;InbreedingCoeff=-0.0839;MQ=54.06;MQ0=4;MQRankSum=-4.960;QD=28.24;ReadPosRankSum=4.337;VQSLOD=4.2856;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:54.79:0,55,720	0/1:4,0:4:19.06:42,0,19	0/0:18,0:9:8.99:0,9,91	0/0:21,0:11:22.19:0,22,240	0/1:17,0:17:60.50:198,0,61	1/1:8,6:13:7.79:619,8,0	0/0:15,0:15:42.14:0,42,846	0/1:14,0:14:45.11:432,0,45	0/1:8,2:10:13.41:179,0,13	0/1:16,0:16:27.90:494,0,28	0/1:12,0:11:4.77:439,0,5	0/1:11,5:15:1.56:491,0,2	0/0:19,0:19:49.88:0,50,590	0/0:14,0:14:30.03:0,30,452	0/1:11,0:11:42.32:288,0,42	0/1:9,0:9:19.65:167,0,20	0/1:18,0:18:65.09:386,0,65	1/1:7,0:7:6.02:119,6,0	0/1:15,0:12:2.83:168,0,3	0/1:10,2:12:21.30:409,0,21	1/1:9,0:9:15.05:351,15,0	0/1:9,2:11:16.03:207,0,16	1/1:11,5:16:1.62:720,2,0	1/1:5,5:10:20.74:520,21,0	0/1:9,0:9:13.65:309,0,14	1/1:15,0:15:6.34:571,6,0	0/1:17,0:16:43.42:284,0,43	1/1:4,0:4:6.02:119,6,0
chr10	81063048	.	A	AT	11364.74	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=0.608;DP=451;FS=5.295;HRun=7;HaplotypeScore=81.3207;InbreedingCoeff=0.8758;MQ=64.67;MQ0=0;MQRankSum=-0.673;QD=28.92;ReadPosRankSum=2.233;VQSLOD=5.5470;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:30.04:0,30,290	1/1:0,7:7:18.06:217,18,0	0/1:4,0:2:7.01:7,0,23	0/0:6,0:6:6.01:0,6,58	1/1:4,22:26:66.12:761,66,0	1/1:3,19:22:51.16:616,51,0	0/0:12,0:12:33.05:0,33,319	1/1:5,26:31:78.24:942,78,0	1/1:1,13:14:39.12:471,39,0	1/1:4,14:18:42.13:507,42,0	1/1:4,22:26:63.15:738,63,0	1/1:3,14:17:39.12:469,39,0	0/0:13,0:13:36.05:0,36,348	0/0:16,0:16:48.08:0,48,463	1/1:1,15:16:39.12:471,39,0	1/1:0,7:7:21.06:254,21,0	1/1:1,16:17:36.11:433,36,0	1/1:2,18:20:51.14:603,51,0	1/1:2,22:24:69.20:822,69,0	1/1:2,25:27:69.18:818,69,0	1/1:1,8:9:21.06:254,21,0	1/1:1,8:9:24.07:285,24,0	1/1:4,5:9:15.05:181,15,0	1/1:1,13:14:33.10:399,33,0	1/1:3,17:20:42.13:507,42,0	1/1:5,13:19:38.99:450,39,0	1/1:1,19:20:54.06:652,54,0	1/1:3,14:17:42.13:507,42,0
chr10	81063076	.	AT	A	837.12	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.332;DP=456;FS=0.674;HRun=7;HaplotypeScore=130.7975;InbreedingCoeff=0.9722;MQ=71.39;MQ0=0;MQRankSum=-0.569;QD=25.37;ReadPosRankSum=1.717;VQSLOD=2.1837;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:27.06:275,27,0	0/0:6,0:6:15.05:0,15,189	0/0:7,0:6:15.04:0,15,175	0/0:8,0:8:18.04:0,18,210	0/0:29,0:29:87.27:0,87,1081	0/0:22,0:22:63.19:0,63,781	0/0:9,0:9:24.08:0,24,302	0/0:39,0:39:99:0,99,1243	0/0:11,0:11:33.11:0,33,415	0/0:21,0:21:63.20:0,63,784	0/0:20,0:20:51.14:0,51,626	0/0:18,0:18:45.14:0,45,566	1/1:0,10:10:27.06:275,27,0	1/1:0,14:14:42.10:429,42,0	0/0:19,0:19:57.18:0,57,712	0/0:8,0:8:18.05:0,18,216	0/0:17,0:17:39.12:0,39,491	0/0:17,0:17:48.15:0,48,603	0/0:22,0:22:54.16:0,54,667	0/0:26,0:26:66.21:0,66,830	0/0:7,0:7:15.05:0,15,189	0/0:15,0:15:45.12:0,45,542	0/0:14,0:14:39.12:0,39,491	0/0:8,0:8:24.08:0,24,302	0/0:23,0:24:63.07:0,63,769	0/0:15,1:16:17.53:0,18,525	0/0:23,0:23:63.20:0,63,792	0/0:17,0:17:33.11:0,33,415
chr10	81063315	.	TG	T	1334.88	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-1.331;DP=513;FS=2.981;HRun=2;HaplotypeScore=96.3096;InbreedingCoeff=0.9980;MQ=86.31;MQ0=0;MQRankSum=-2.883;QD=31.78;ReadPosRankSum=2.031;VQSLOD=3.5121;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:39.13:506,39,0	0/0:10,0:10:30.09:0,30,429	0/0:22,0:22:60.20:0,60,885	0/0:26,0:26:57.58:0,58,881	0/0:27,0:26:78.23:0,78,1109	0/0:29,0:29:87.27:0,87,1261	0/0:8,0:8:24.08:0,24,356	0/0:29,0:29:87.28:0,87,1269	0/0:11,0:11:30.10:0,30,449	0/0:16,0:16:45.14:0,45,626	0/0:23,0:23:66.20:0,66,948	0/0:9,0:9:27.09:0,27,404	1/1:0,10:10:30.10:387,30,0	1/1:0,18:18:45.15:584,45,0	0/0:16,0:16:48.16:0,48,718	0/0:12,0:12:36.10:0,36,519	0/0:26,0:26:78.26:0,78,1164	0/0:10,0:10:30.10:0,30,449	0/0:21,0:21:63.20:0,63,925	0/0:27,0:27:78.26:0,78,1169	0/0:12,0:12:36.08:0,36,497	0/0:20,0:20:60.19:0,60,876	0/0:17,0:17:48.16:0,48,718	0/0:14,0:14:42.10:0,42,570	0/0:21,0:21:60.19:0,60,863	0/0:22,0:22:66.22:0,66,989	0/0:24,0:23:72.24:0,72,1079	0/0:19,0:19:51.14:0,51,740
chr10	81063821	.	ATAGTT	A	13322.97	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=4.732;DP=503;FS=0.344;HRun=0;HaplotypeScore=140.0790;InbreedingCoeff=0.9944;MQ=77.15;MQ0=0;MQRankSum=-14.739;QD=50.28;ReadPosRankSum=2.368;VQSLOD=5.2999;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:48.16:0,48,1368	1/1:0,7:7:21.07:426,21,0	0/0:21,0:21:60.21:0,60,1717	0/0:10,0:10:27.09:0,27,803	1/1:3,24:27:72.25:1427,72,0	0/0:30,0:30:81.28:0,81,1792	0/0:11,0:11:30.10:0,30,906	1/1:10,11:21:42.13:808,42,0	0/0:24,0:24:69.24:0,69,1595	1/1:5,26:31:81.28:1636,81,0	1/1:3,13:16:39.13:760,39,0	0/0:24,0:24:63.22:0,63,1473	0/0:27,0:27:69.24:0,69,2088	0/0:16,0:16:45.15:0,45,1352	1/1:2,15:17:45.15:871,45,0	1/1:0,13:13:39.13:781,39,0	1/1:2,6:8:18.06:365,18,0	1/1:2,7:9:21.07:426,21,0	1/1:3,10:11:30.09:574,30,0	1/1:7,22:29:72.21:1334,72,0	1/1:2,5:7:15.05:281,15,0	0/0:21,0:21:54.19:0,54,1257	0/0:29,0:29:75.26:0,75,1747	0/0:8,0:8:24.07:0,24,526	1/1:2,19:21:57.20:1150,57,0	1/1:2,18:20:57.20:1147,57,0	1/1:2,15:17:45.15:913,45,0	1/1:2,7:9:21.07:421,21,0
chr10	81063823	.	AGT	A	1508.95	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=18.094;DP=501;FS=0.328;HRun=0;HaplotypeScore=149.8323;InbreedingCoeff=0.1985;MQ=77.32;MQ0=0;MQRankSum=-13.841;QD=5.80;ReadPosRankSum=5.773;VQSLOD=2.9782;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:51.17:0,51,1009	1/1:7,0:7:18.17:69,18,0	0/0:21,0:21:63.19:0,63,1211	0/0:10,0:10:30.10:0,30,599	0/1:27,0:27:42.25:144,0,42	0/0:29,0:29:87.28:0,87,1720	0/0:12,0:12:36.12:0,36,708	0/1:21,0:21:67.85:68,0,265	0/0:24,0:24:72.25:0,72,1453	0/1:30,0:30:51.88:179,0,52	1/1:15,0:15:18.83:103,19,0	0/0:23,0:23:69.21:0,69,1329	0/0:27,0:27:75.24:0,75,1477	0/0:17,0:17:48.16:0,48,948	0/1:17,0:17:41.30:122,0,41	1/1:13,0:13:33.07:131,33,0	0/1:8,0:8:37.46:37,0,78	1/1:8,1:9:23.91:104,24,0	0/1:13,0:11:56.61:57,0,94	0/1:27,0:27:99:138,0,103	0/1:6,0:6:20.91:23,0,21	0/0:23,0:23:69.24:0,69,1344	0/0:28,0:28:84.29:0,84,1662	0/0:9,0:9:27.09:0,27,534	0/1:21,0:21:33.12:126,0,33	1/1:19,3:22:55.71:249,56,0	0/1:16,0:16:8.67:106,0,9	0/1:8,0:8:3.57:44,0,4
chr10	81063868	.	A	AT	11624.99	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-3.773;DP=500;FS=0.387;HRun=6;HaplotypeScore=88.5391;InbreedingCoeff=0.9912;MQ=73.05;MQ0=0;MQRankSum=-7.426;QD=32.29;ReadPosRankSum=-1.550;VQSLOD=4.1474;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:26:72.19:888,72,0	1/1:2,10:12:24.08:302,24,0	0/0:13,0:13:30.06:0,30,302	0/0:10,0:9:26.98:0,27,252	1/1:5,20:25:60.05:715,60,0	0/0:17,0:17:51.10:0,51,513	0/0:14,0:14:33.07:0,33,337	1/1:1,33:34:99:1232,99,0	0/0:15,0:15:36.07:0,36,362	1/1:7,25:32:78.22:961,78,0	1/1:1,15:16:42.05:493,42,0	0/0:15,0:15:36.07:0,36,361	1/1:2,18:20:48.15:604,48,0	1/1:1,18:19:51.16:641,51,0	1/1:3,14:16:42.13:526,42,0	1/1:2,13:15:42.10:507,42,0	1/1:3,7:10:21.07:264,21,0	1/1:4,9:13:27.09:340,27,0	1/1:2,20:22:60.17:732,60,0	1/1:3,22:25:66.21:822,66,0	1/1:0,4:4:12:133,12,0	0/0:20,0:20:51.11:0,51,520	0/0:24,0:24:66.12:0,66,663	0/0:12,0:12:33.07:0,33,337	1/1:0,19:19:57.18:717,57,0	1/1:2,22:24:69.15:834,69,0	1/1:0,21:21:60.19:751,60,0	1/1:1,4:5:14.99:166,15,0
chr10	81064511	.	ATT	A	13621.54	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-9.974;DP=626;FS=9.328;HRun=10;HaplotypeScore=87.9390;InbreedingCoeff=0.9760;MQ=65.21;MQ0=2;MQRankSum=-0.589;QD=26.97;ReadPosRankSum=2.485;VQSLOD=4.3302;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:38:72.36:0,72,249	1/1:1,11:12:30:334,30,0	0/0:8,0:8:17.80:0,18,243	0/0:14,0:14:6.08:0,6,272	1/1:5,25:30:66.14:736,66,0	1/1:2,18:19:45.12:502,45,0	0/0:14,0:16:44.63:0,45,656	1/1:8,21:29:60.59:660,61,0	1/1:1,17:18:48.13:535,48,0	1/1:4,21:25:60.13:657,60,0	1/1:3,20:23:60.16:669,60,0	1/1:2,20:22:60.15:669,60,0	0/0:1,0:19:45.42:0,45,172	0/0:2,0:25:49.78:0,50,171	1/1:3,26:29:66.17:736,66,0	1/1:0,21:21:57.15:636,57,0	1/1:5,18:23:54.08:588,54,0	1/1:0,20:20:51.05:555,51,0	1/1:2,18:20:54.14:602,54,0	1/1:3,35:38:93.20:1037,93,0	1/1:0,10:10:21.06:234,21,0	1/1:1,18:20:42.04:527,42,0	1/1:4,18:22:51.13:569,51,0	1/1:3,18:21:44.79:501,45,0	1/1:2,24:26:60.16:669,60,0	1/1:2,29:30:84.22:936,84,0	1/1:2,28:30:78.20:870,78,0	1/1:3,12:15:36.09:401,36,0
chr10	81065572	.	C	CTT	16423.05	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-5.685;DP=507;FS=2.962;HRun=7;HaplotypeScore=56.9783;InbreedingCoeff=0.9675;MQ=78.99;MQ0=0;MQRankSum=-3.320;QD=36.50;ReadPosRankSum=3.740;VQSLOD=4.6747;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:4:12.04:197,12,0	1/1:1,6:7:18.06:295,18,0	0/0:13,0:13:14.16:0,14,291	0/0:17,0:17:21.88:0,22,296	1/1:2,22:24:66.15:1026,66,0	1/1:0,16:16:42.14:689,42,0	0/0:27,0:27:66.12:0,66,734	1/1:9,27:37:89.74:1379,90,0	1/1:2,11:15:26.58:403,27,0	1/1:8,16:24:48.16:788,48,0	1/1:1,18:19:54.05:798,54,0	1/1:1,10:12:18.06:295,18,0	1/1:2,10:12:24.08:394,24,0	1/1:1,18:20:51.17:837,51,0	1/1:1,16:17:33.11:542,33,0	1/1:2,15:17:42.14:689,42,0	1/1:3,12:15:27.05:414,27,0	1/1:1,11:13:24.08:394,24,0	1/1:5,20:25:60.19:921,60,0	1/1:3,20:24:57.05:821,57,0	1/1:1,14:15:36.12:591,36,0	1/1:1,18:19:48.03:699,48,0	1/1:3,18:21:54.18:886,54,0	1/1:2,15:17:36.12:591,36,0	1/1:0,23:24:51.17:837,51,0	1/1:2,17:19:51.13:754,51,0	1/1:4,24:28:57.19:936,57,0	1/1:1,5:6:15.05:246,15,0
chr10	81066726	.	TG	T	17382.27	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.469;DP=503;FS=13.918;HRun=1;HaplotypeScore=55.1936;InbreedingCoeff=0.9833;MQ=82.62;MQ0=0;MQRankSum=-4.586;QD=38.63;ReadPosRankSum=2.951;VQSLOD=4.1236;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:96.32:1342,96,0	1/1:0,5:5:12.04:168,12,0	0/0:13,0:13:27.96:0,28,476	0/0:17,0:17:30.72:0,31,682	1/1:0,30:30:87.29:1216,87,0	1/1:0,17:17:42.14:587,42,0	0/0:23,0:23:66.23:0,66,1055	1/1:0,49:49:99:1921,141,0	1/1:0,17:17:48.16:671,48,0	1/1:0,20:20:60.19:822,60,0	1/1:0,16:16:48.16:671,48,0	1/1:0,12:12:33.11:461,33,0	1/1:0,18:18:48.16:671,48,0	1/1:0,21:21:60.20:839,60,0	1/1:0,15:15:36.12:504,36,0	1/1:0,13:13:39.13:546,39,0	1/1:0,21:21:54.18:754,54,0	1/1:0,8:8:21.07:294,21,0	1/1:0,22:21:63.21:879,63,0	1/1:0,10:10:30.10:420,30,0	1/1:0,14:14:36.12:503,36,0	1/1:0,6:6:18.06:251,18,0	1/1:0,9:9:24.08:336,24,0	1/1:0,16:16:42.14:587,42,0	1/1:0,17:17:48.16:671,48,0	1/1:0,17:17:51.17:713,51,0	1/1:0,21:21:54.18:755,54,0	1/1:0,23:23:57.19:797,57,0
chr10	81069859	.	G	GATCTT	46158.94	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-1.580;DP=630;FS=21.918;HRun=0;HaplotypeScore=149.0382;InbreedingCoeff=0.8627;MQ=67.51;MQ0=0;MQRankSum=-9.624;QD=76.68;ReadPosRankSum=3.135;VQSLOD=4.5032;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,11:13:39.13:1233,39,0	1/1:2,14:16:45.11:1349,45,0	0/1:19,0:19:0.04:0,0,653	0/0:13,0:13:18:0,18,384	1/1:5,27:34:81.27:2269,81,0	1/1:9,17:27:78.14:1998,78,0	0/0:15,0:15:45.12:0,45,877	1/1:18,20:39:99:3570,117,0	1/1:3,21:24:72.25:2148,72,0	1/1:6,19:27:78.27:2336,78,0	1/1:6,16:22:63.04:1517,63,0	1/1:8,23:33:93.27:2690,93,0	1/1:2,24:26:75.22:2239,75,0	1/1:5,13:20:45.15:1358,45,0	1/1:12,18:31:78.18:2135,78,0	1/1:4,25:31:81.28:2506,81,0	1/1:1,7:8:21.07:664,21,0	1/1:2,3:5:9.03:285,9,0	1/1:7,10:18:48.47:1487,48,0	1/1:8,24:33:87.13:2450,87,0	1/1:1,11:13:30.10:949,30,0	1/1:5,20:26:75.17:2108,75,0	1/1:5,20:28:65.96:1746,66,0	1/1:4,9:13:27.09:796,27,0	1/1:4,30:35:99:2982,102,0	1/1:6,26:32:96.33:2992,96,0	1/1:6,18:25:69.19:1972,69,0	1/1:1,3:4:12.04:380,12,0
chr10	81070722	.	A	ATT	3588.75	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-9.682;DP=576;FS=4.030;HRun=8;HaplotypeScore=64.7839;InbreedingCoeff=0.9117;MQ=81.79;MQ0=0;MQRankSum=-0.698;QD=27.82;ReadPosRankSum=1.951;VQSLOD=3.5354;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.10:0,42,468	0/0:10,0:10:30.08:0,30,334	0/1:19,0:19:6.95:7,0,349	0/0:14,0:14:33.61:0,34,361	0/0:30,0:30:81.17:0,81,891	1/1:5,26:31:66.23:1048,66,0	0/0:13,0:13:39.07:0,39,416	0/0:42,0:42:99:0,105,1138	1/1:2,10:12:21.07:333,21,0	0/0:15,0:15:36.09:0,36,401	0/0:30,0:30:81.16:0,81,883	1/1:5,12:18:35.61:532,36,0	0/0:23,0:23:57.12:0,57,625	0/0:19,0:19:57.13:0,57,625	0/0:26,0:26:69.13:0,69,741	0/0:17,0:16:45.10:0,45,493	0/0:11,0:11:30.08:0,30,334	0/0:12,0:12:33.09:0,33,366	0/0:25,0:25:66.11:0,66,700	0/0:29,0:29:78.16:0,78,851	0/0:22,0:22:63.16:0,63,702	1/1:3,15:18:39.05:564,39,0	1/1:1,12:15:39.11:581,39,0	1/1:0,15:16:33.11:524,33,0	0/0:22,0:22:51.07:0,51,549	0/0:26,0:26:66.16:0,66,736	0/0:41,0:41:99:0,117,1275	0/0:5,0:5:15.04:0,15,167
chr10	81071116	.	G	GA	12517.72	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-14.060;DP=567;FS=5.843;HRun=7;HaplotypeScore=61.8687;InbreedingCoeff=0.9947;MQ=80.24;MQ0=0;MQRankSum=-3.293;QD=30.31;ReadPosRankSum=0.922;VQSLOD=5.2996;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:22.18:550,22,0	1/1:0,6:6:18.06:217,18,0	0/0:20,0:19:39.01:0,39,360	0/0:15,0:15:15.36:0,15,277	1/1:3,29:32:81.25:979,81,0	0/0:23,0:23:66.05:0,66,622	0/0:10,0:10:24.04:0,24,232	1/1:7,28:35:81.24:967,81,0	0/0:16,0:16:42.06:0,42,406	1/1:5,21:26:66.19:784,66,0	1/1:1,35:36:99:1244,105,0	0/0:20,0:20:51.07:0,51,492	1/1:4,15:19:45.14:544,45,0	1/1:4,15:19:39.12:471,39,0	1/1:3,17:20:45.14:544,45,0	1/1:2,20:22:51.16:616,51,0	1/1:2,9:12:29.96:341,30,0	1/1:1,12:13:36.11:428,36,0	1/1:3,19:22:57.12:660,57,0	1/1:1,30:31:87.20:1020,87,0	1/1:1,8:9:21.06:254,21,0	0/0:23,0:23:66.10:0,66,637	0/0:16,0:16:39.05:0,39,377	0/0:11,0:11:30.04:0,30,290	1/1:3,21:24:60.18:725,60,0	1/1:1,25:26:75.23:906,75,0	1/1:2,24:26:57.17:688,57,0	1/1:0,17:17:48.15:580,48,0
chr10	81071710	.	T	TAC	3089.59	PASS	AB=0.797;AC=37;AF=0.685;AN=54;BaseQRankSum=-0.124;DP=643;FS=7.009;HRun=0;HaplotypeScore=93.8856;InbreedingCoeff=-0.1245;MQ=56.05;MQ0=32;MQRankSum=1.698;QD=5.44;ReadPosRankSum=2.361;VQSLOD=2.0570;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:52,0:50:26.98:27,0,101	1/1:3,7:9:8.06:88,8,0	0/0:29,0:14:4.85:0,5,42	0/1:37,0:15:0:0,0,0	0/1:18,11:28:28.32:40,0,28	./.	0/0:33,0:33:42.06:0,42,465	0/1:28,0:29:43.17:229,0,43	1/1:25,0:24:8.99:75,9,0	1/1:9,11:19:32.95:421,33,0	0/1:6,9:13:28.29:40,0,28	1/1:21,0:19:7.69:24,8,0	0/1:16,0:14:34.78:35,0,46	0/1:25,0:25:18.47:39,0,18	0/1:12,13:25:50.31:167,0,50	0/1:9,19:29:16.12:213,0,16	0/1:11,6:17:56.47:72,0,56	0/1:4,2:4:37.23:37,0,59	1/1:11,4:13:11.78:151,12,0	1/1:15,0:14:23.35:291,23,0	1/1:33,3:31:30.82:466,31,0	1/1:24,0:24:0.89:2,1,0	1/1:17,0:17:14.75:71,15,0	1/1:27,0:26:12.99:91,13,0	0/1:6,14:20:37.47:37,0,39	1/1:16,9:23:29.84:379,30,0	1/1:11,12:22:6.83:134,7,0	0/1:4,3:5:22.29:116,0,22
chr10	81071737	.	ACT	A	1434.55	PASS	AB=0.997;AC=32;AF=0.571;AN=56;BaseQRankSum=3.086;DP=653;FS=4.633;HRun=0;HaplotypeScore=97.2948;InbreedingCoeff=-0.2913;MQ=46.64;MQ0=87;MQRankSum=3.504;QD=2.46;ReadPosRankSum=-4.170;VQSLOD=0.0901;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:45,1:40:29.97:30,0,49	0/1:10,0:9:6.46:6,0,25	1/1:14,0:5:7.82:48,8,0	0/1:18,0:2:0:0,0,0	0/1:21,0:19:13.95:14,0,76	1/1:1,13:13:2.99:24,3,0	0/0:43,0:29:37.22:0,37,671	0/1:22,0:18:89.89:90,0,226	1/1:7,15:18:8.89:59,9,0	0/1:26,0:22:78.89:79,0,185	0/1:18,0:16:13.19:13,0,74	1/1:24,0:20:23.03:193,23,0	0/1:24,0:19:22.28:72,0,22	0/1:28,1:27:14.31:52,0,14	0/1:25,0:24:33.29:33,0,132	0/1:32,0:31:78.97:79,0,110	0/1:23,0:19:21.11:21,0,118	0/0:13,0:9:19.69:0,20,151	0/0:13,0:9:3.17:0,3,118	0/1:17,0:14:26.91:27,0,58	0/1:41,0:32:95.29:117,0,95	1/1:25,0:23:5.97:50,6,0	1/1:20,0:19:29.69:235,30,0	1/1:26,1:25:32.20:263,32,0	0/1:21,0:21:23.31:23,0,73	0/1:29,0:21:48.25:48,0,177	0/1:24,0:21:14.96:15,0,99	0/1:11,0:7:4.99:5,0,109
chr10	81071743	.	A	ACT	49.82	PASS	AB=0.732;AC=8;AF=0.148;AN=54;BaseQRankSum=4.635;DP=644;FS=2.146;HRun=0;HaplotypeScore=106.8126;InbreedingCoeff=0.1670;MQ=45.13;MQ0=92;MQRankSum=2.585;QD=0.29;ReadPosRankSum=-1.016;VQSLOD=2.1730;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,27:39:8.26:105,0,8	0/0:11,0:9:5.46:0,5,38	0/0:8,0:2:6:0,6,61	./.	0/0:19,0:16:8.94:0,9,90	0/0:15,0:14:0.47:0,0,1	0/0:38,0:24:36.12:0,36,539	0/0:19,0:15:32.50:0,33,431	1/1:23,0:18:1.41:4,1,0	0/0:26,0:22:50.14:0,50,589	0/0:18,0:15:8.89:0,9,90	0/0:25,0:21:14.44:0,14,112	0/1:14,8:18:15.96:16,0,55	0/1:8,19:26:14.69:18,0,15	0/0:24,0:23:20.59:0,21,167	0/0:29,0:28:24.11:0,24,187	0/0:26,0:22:19.32:0,19,208	0/0:14,0:10:2.50:0,3,196	0/0:14,0:10:29.96:0,30,318	0/0:17,0:14:15.69:0,16,95	0/0:44,0:35:27.91:0,28,282	1/1:28,0:26:0.44:1,0,0	0/1:21,0:19:14.10:14,0,41	0/0:29,0:26:16.74:0,17,193	0/0:21,0:19:11.98:0,12,125	0/0:28,0:21:49.65:0,50,395	0/0:24,0:21:21.27:0,21,206	0/0:11,0:7:14.97:0,15,153
chr10	81071750	.	CAT	C	1352.84	PASS	AB=0.969;AC=30;AF=0.577;AN=52;BaseQRankSum=3.825;DP=610;FS=16.516;HRun=0;HaplotypeScore=94.9728;InbreedingCoeff=-0.0961;MQ=43.80;MQ0=91;MQRankSum=1.661;QD=2.60;ReadPosRankSum=1.740;VQSLOD=0.9808;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:45,0:37:0.06:68,0,0	0/0:9,0:7:4.81:0,5,29	./.	./.	0/1:20,0:17:13.99:14,0,40	1/1:14,0:13:2.99:23,3,0	0/0:41,0:27:6.31:0,6,223	0/0:16,0:12:33.11:0,33,209	1/1:22,0:17:8.92:62,9,0	0/1:24,0:20:4.05:4,0,141	0/1:16,0:13:13.22:13,0,39	1/1:26,0:22:31.43:212,31,0	1/1:23,0:18:16.10:111,16,0	1/1:25,1:24:10.88:98,11,0	0/1:24,0:23:51.35:57,0,51	0/1:26,0:25:69.80:88,0,70	0/1:23,0:19:41.45:41,0,55	0/1:15,0:11:33.74:34,0,54	0/0:15,0:11:22.63:0,23,147	0/1:14,0:11:21.79:22,0,36	0/1:42,0:34:50.04:50,0,93	0/1:6,21:25:0.02:0,0,0	1/1:21,0:19:21.90:160,22,0	1/1:27,1:25:27.37:210,27,0	0/1:17,0:15:30.04:30,0,36	0/1:30,0:23:93.84:94,0,106	0/1:27,0:24:62.59:118,0,63	0/1:10,0:7:2.54:3,0,73
chr10	81072280	.	T	TG	18976.02	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=3.822;DP=627;FS=2.913;HRun=1;HaplotypeScore=117.1312;InbreedingCoeff=0.9992;MQ=85.96;MQ0=0;MQRankSum=-7.940;QD=33.95;ReadPosRankSum=6.961;VQSLOD=4.1974;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:69.23:915,69,0	1/1:0,8:8:24.08:310,24,0	0/0:24,0:24:66.21:0,66,830	0/0:23,0:23:66.14:0,66,823	1/1:3,22:25:61.13:819,61,0	1/1:2,29:31:66.90:893,67,0	0/0:21,0:21:63.20:0,63,818	1/1:2,23:25:69.70:923,70,0	1/1:6,10:16:37.28:490,37,0	1/1:1,19:20:57.12:723,57,0	1/1:2,20:22:60.90:792,61,0	1/1:4,19:23:60.71:753,61,0	1/1:0,20:20:60.19:775,60,0	1/1:2,23:25:62.99:789,63,0	1/1:1,26:27:73.12:950,73,0	1/1:3,15:18:46.42:588,46,0	1/1:2,21:23:60.19:783,60,0	1/1:1,21:22:54.18:706,54,0	1/1:2,17:19:49.72:648,50,0	1/1:1,27:28:78.21:986,78,0	1/1:6,19:25:59.03:760,59,0	1/1:2,22:24:64.83:861,65,0	1/1:1,22:23:67.37:846,67,0	1/1:2,16:18:49.71:645,50,0	1/1:0,22:21:60.19:765,60,0	1/1:2,22:24:66.05:876,66,0	1/1:1,24:23:69.22:901,69,0	1/1:3,12:15:36.56:480,37,0
chr10	81073513	.	G	GC	17634.24	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=3.744;DP=458;FS=15.251;HRun=0;HaplotypeScore=99.1449;InbreedingCoeff=0.9817;MQ=73.26;MQ0=0;MQRankSum=-5.751;QD=42.59;ReadPosRankSum=4.264;VQSLOD=3.4113;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:45.15:716,45,0	1/1:1,7:8:21.07:334,21,0	0/0:18,0:18:25.97:0,26,543	0/0:12,0:12:23.63:0,24,372	1/1:2,16:18:42.14:670,42,0	1/1:1,36:37:96.33:1534,96,0	0/0:14,0:14:42.14:0,42,587	1/1:2,23:25:75.21:1170,75,0	1/1:0,12:12:30.10:479,30,0	1/1:0,9:9:27.09:432,27,0	1/1:0,24:24:69.24:1101,69,0	1/1:0,14:14:39.13:623,39,0	1/1:0,12:12:24.08:384,24,0	1/1:0,19:19:54.18:863,54,0	1/1:1,13:14:36.12:575,36,0	1/1:0,10:10:27.09:431,27,0	1/1:1,19:20:51.17:815,51,0	1/1:0,7:7:18.06:287,18,0	1/1:1,19:20:60.20:957,60,0	1/1:2,20:22:57.19:909,57,0	1/1:0,12:12:30.10:466,30,0	1/1:0,4:4:12.04:191,12,0	1/1:0,13:13:35.91:575,36,0	1/1:0,20:20:51.17:815,51,0	1/1:2,20:22:54.18:863,54,0	1/1:0,15:15:42.14:671,42,0	1/1:0,19:19:57.19:910,57,0	1/1:1,20:21:54.18:863,54,0
chr10	81073662	.	TA	T	6118.24	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=2.004;DP=463;FS=0.381;HRun=10;HaplotypeScore=113.2771;InbreedingCoeff=0.9489;MQ=64.10;MQ0=0;MQRankSum=-2.825;QD=21.47;ReadPosRankSum=0.354;VQSLOD=4.2207;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:36.02:0,36,371	1/1:3,4:7:8.99:78,9,0	0/0:5,1:6:13.01:0,13,129	0/0:7,1:6:8.90:0,9,80	1/1:3,19:22:50.97:443,51,0	0/0:26,0:26:66.15:0,66,717	0/0:8,0:8:24.06:0,24,265	1/1:6,29:35:86.88:739,87,0	0/0:17,0:17:39.10:0,39,424	1/1:1,14:15:41.99:365,42,0	1/1:4,14:18:11.81:331,12,0	0/0:12,0:12:33.08:0,33,357	0/0:16,0:16:45.07:0,45,474	0/0:17,1:20:24.76:0,25,455	1/1:0,8:8:24:208,24,0	1/1:2,15:17:41.99:365,42,0	1/1:2,22:24:53.98:469,54,0	1/1:1,11:12:32.99:286,33,0	1/1:3,17:20:50.96:438,51,0	1/1:3,25:28:71.98:625,72,0	1/1:1,5:6:12:104,12,0	0/0:15,0:15:4.04:0,4,272	0/0:18,0:19:44.93:0,45,468	0/0:15,0:15:39.11:0,39,431	1/1:2,13:15:35.99:313,36,0	1/1:0,17:16:47.99:417,48,0	1/1:2,31:33:86.98:755,87,0	1/1:1,7:8:20.99:182,21,0
chr10	81073712	.	G	GT	2724.30	PASS	AB=0.995;AC=47;AF=0.839;AN=56;BaseQRankSum=0.543;DP=497;FS=11.491;HRun=11;HaplotypeScore=190.7477;InbreedingCoeff=0.0548;MQ=58.79;MQ0=9;MQRankSum=-2.701;QD=5.61;ReadPosRankSum=1.797;VQSLOD=0.1913;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:8.54:24,0,9	1/1:4,0:4:8.71:30,9,0	0/1:26,0:15:14.93:15,0,69	0/1:30,0:16:36.54:37,0,50	0/1:25,1:25:14.44:62,0,14	1/1:21,0:21:38.38:169,38,0	0/1:4,0:4:18.42:18,0,58	1/1:31,3:32:12.93:273,13,0	1/1:16,0:15:34.53:153,35,0	1/1:14,1:15:18.67:113,19,0	1/1:19,3:22:28.45:135,28,0	1/1:20,0:20:46.70:222,47,0	0/0:11,0:11:10.52:0,11,29	0/1:11,0:11:8.43:8,0,10	1/1:15,0:15:15.93:80,16,0	0/1:13,0:12:20.49:75,0,20	1/1:17,0:17:16.90:109,17,0	1/1:9,1:10:3.64:58,4,0	1/1:23,1:22:18.02:161,18,0	1/1:27,1:28:21.66:198,22,0	1/1:6,1:6:8.20:49,8,0	1/1:18,0:17:40.24:182,40,0	1/1:11,0:13:27.44:150,27,0	1/1:14,0:14:25.52:151,26,0	1/1:12,0:12:18.93:83,19,0	1/1:24,2:24:9.82:156,10,0	1/1:30,1:31:7.39:101,7,0	1/1:8,0:8:14.14:57,14,0
chr10	81073715	.	T	TG	2446.22	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-1.798;DP=488;FS=7.834;HRun=0;HaplotypeScore=188.9343;InbreedingCoeff=0.8795;MQ=54.56;MQ0=11;MQRankSum=-3.671;QD=25.75;ReadPosRankSum=2.230;VQSLOD=2.9085;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:33.48:0,33,311	0/0:4,0:4:8.44:0,8,34	0/0:30,0:14:0.45:0,0,160	0/0:32,0:15:11.64:0,12,167	0/0:26,0:25:47.10:0,47,304	1/1:1,15:16:45.01:431,45,0	0/0:4,0:4:6.88:0,7,122	0/0:29,0:27:23.28:0,23,269	1/1:2,13:14:42.05:415,42,0	0/0:14,0:14:31.25:0,31,217	0/0:22,0:22:19.97:0,20,205	1/1:4,16:20:58.91:601,59,0	0/0:11,0:11:31.82:0,32,285	0/0:11,0:11:25.94:0,26,196	0/0:15,0:15:42.19:0,42,257	0/0:13,0:12:13.09:0,13,184	0/0:16,0:16:22.10:0,22,151	0/0:11,0:11:24.90:0,25,164	0/0:26,0:23:40.11:0,40,327	0/0:27,0:27:31.36:0,31,296	0/0:7,0:6:4.62:0,5,54	1/1:3,15:17:51.01:491,51,0	1/1:2,10:12:30.04:321,30,0	1/1:3,11:14:37.21:372,37,0	0/0:12,0:12:23.26:0,23,108	0/0:27,0:25:44.90:0,45,363	0/0:29,0:29:63.26:0,63,419	0/0:7,0:7:13.31:0,13,51
chr10	81073717	.	TTTTTTTG	T	4067.37	PASS	AB=0.988;AC=33;AF=0.589;AN=56;BaseQRankSum=-0.722;DP=502;FS=1.328;HRun=0;HaplotypeScore=237.7661;InbreedingCoeff=-0.2627;MQ=52.63;MQ0=11;MQRankSum=-1.483;QD=9.06;ReadPosRankSum=-4.866;VQSLOD=1.7767;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,6:22:44.79:543,45,0	0/1:5,0:5:4.55:60,0,5	0/1:30,0:14:2.60:3,0,180	0/0:31,0:14:12.05:0,12,335	0/1:28,0:27:60.47:161,0,60	0/1:17,0:17:43.56:103,0,44	0/0:5,0:5:6.01:0,6,284	0/1:28,0:26:65.76:148,0,66	0/1:16,0:15:51.45:51,0,52	1/1:15,0:15:5.13:113,5,0	1/1:25,0:25:46.38:327,46,0	0/1:22,0:22:92.22:99,0,92	0/1:9,3:12:36.38:237,0,36	1/1:11,1:12:25.36:228,25,0	0/1:16,0:16:77.51:89,0,78	0/1:14,0:13:35.94:212,0,36	1/1:15,0:15:2.20:116,2,0	0/1:10,0:10:46.93:66,0,47	0/1:25,0:21:69.37:203,0,69	0/1:29,0:29:10.48:233,0,10	0/1:6,0:5:13.75:14,0,30	0/0:17,0:16:31.46:0,31,106	0/1:12,0:12:13.72:14,0,60	0/1:13,0:13:39.29:44,0,39	1/1:12,0:12:21.18:214,21,0	1/1:28,0:26:28.69:374,29,0	0/1:30,0:30:50.70:287,0,51	1/1:7,0:7:8.04:126,8,0
chr10	81073720	.	TTTTG	T	9349.35	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.202;DP=508;FS=1.677;HRun=0;HaplotypeScore=198.8483;InbreedingCoeff=0.9072;MQ=50.54;MQ0=11;MQRankSum=-5.354;QD=21.15;ReadPosRankSum=3.407;VQSLOD=4.5150;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:48.63:338,49,0	1/1:3,2:5:14.91:163,15,0	0/0:31,0:14:5.79:0,6,100	0/0:30,0:13:9.86:0,10,212	1/1:20,9:28:53.49:489,53,0	1/1:17,0:17:50.19:435,50,0	0/0:5,0:5:14.49:0,14,189	1/1:27,3:28:42.77:471,43,0	1/1:15,0:14:39.82:366,40,0	1/1:11,3:14:25.57:280,26,0	1/1:14,12:26:62.53:671,63,0	1/1:23,0:23:55.46:490,55,0	1/1:13,0:12:28.18:242,28,0	1/1:12,0:12:31.09:217,31,0	1/1:13,4:17:41.40:391,41,0	1/1:7,7:13:19.93:387,20,0	1/1:13,2:15:33.65:270,34,0	1/1:8,1:9:19.80:169,20,0	1/1:23,3:22:43.47:386,43,0	1/1:18,10:28:68.19:601,68,0	1/1:4,2:5:11.70:73,12,0	1/1:19,0:18:21.33:344,21,0	1/1:12,0:12:29.66:247,30,0	1/1:14,0:14:20.17:196,20,0	1/1:6,7:13:35.73:388,36,0	1/1:16,11:25:59.59:699,60,0	1/1:18,11:29:74.42:769,74,0	1/1:2,6:8:21:267,21,0
chr10	81073721	.	TTTG	T	8488.61	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.915;DP=505;FS=1.610;HRun=0;HaplotypeScore=193.4875;InbreedingCoeff=0.8566;MQ=50.08;MQ0=11;MQRankSum=-5.018;QD=19.42;ReadPosRankSum=2.541;VQSLOD=4.3933;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:51.66:413,52,0	1/1:5,0:5:12.41:102,12,0	0/0:32,0:15:3.27:0,3,104	0/0:30,0:13:9.34:0,9,180	1/1:27,1:27:35.45:293,35,0	1/1:17,0:17:51.08:660,51,0	0/0:5,0:5:14.59:0,15,166	1/1:28,0:26:27.83:300,28,0	1/1:16,0:15:44.68:570,45,0	1/1:13,0:13:24.01:192,24,0	1/1:25,1:26:61.83:479,62,0	1/1:23,0:23:58.36:723,58,0	1/1:13,0:12:28.92:250,29,0	1/1:12,0:12:31.49:221,31,0	1/1:16,0:16:33.24:237,33,0	1/1:14,0:13:11.78:249,12,0	1/1:15,1:16:30.02:213,30,0	1/1:9,0:9:17.67:101,18,0	1/1:26,2:24:34.71:328,35,0	1/1:27,0:27:54.46:380,54,0	1/1:6,0:5:8.26:40,8,0	1/1:19,0:18:28.68:556,29,0	1/1:13,0:13:33.06:422,33,0	1/1:13,0:13:23.82:368,24,0	1/1:12,0:12:33.54:267,34,0	1/1:28,0:26:59.69:509,60,0	1/1:27,0:27:61.13:443,61,0	1/1:8,0:8:19.25:171,19,0
chr10	81073722	.	TTG	T	7008.72	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=2.141;DP=501;FS=6.083;HRun=0;HaplotypeScore=190.3433;InbreedingCoeff=0.6863;MQ=50.02;MQ0=11;MQRankSum=-4.850;QD=15.04;ReadPosRankSum=1.872;VQSLOD=4.1262;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,3:20:52.28:545,52,0	1/1:5,0:5:10.92:86,11,0	0/1:32,0:15:7.23:7,0,56	0/0:30,0:13:7.99:0,8,161	1/1:28,0:27:33.38:256,33,0	1/1:19,0:19:55.95:473,56,0	0/0:5,0:5:13.23:0,13,134	1/1:27,0:25:20.31:242,20,0	1/1:16,0:15:38.81:371,39,0	1/1:13,0:13:24.21:172,24,0	1/1:26,0:26:60.61:410,61,0	1/1:22,0:22:49.61:479,50,0	1/1:11,2:12:33.74:358,34,0	1/1:8,3:11:31.98:300,32,0	1/1:16,0:16:24.83:177,25,0	1/1:14,0:13:6.69:201,7,0	1/1:15,0:15:24.72:179,25,0	1/1:9,0:9:13.03:91,13,0	1/1:26,0:22:38.88:288,39,0	1/1:27,0:27:50.20:345,50,0	1/1:6,0:5:6.26:35,6,0	1/1:19,0:18:28.89:357,29,0	1/1:13,0:13:32.71:269,33,0	1/1:13,0:13:23.11:216,23,0	1/1:12,0:12:31.75:231,32,0	1/1:28,0:26:57.04:418,57,0	1/1:27,0:27:52.53:358,53,0	1/1:8,0:8:17.71:144,18,0
chr10	81073723	.	TG	T	6390.64	PASS	AB=1.000;AC=52;AF=0.929;AN=56;BaseQRankSum=1.884;DP=488;FS=1.699;HRun=1;HaplotypeScore=182.5754;InbreedingCoeff=0.5681;MQ=49.05;MQ0=11;MQRankSum=-4.627;QD=13.23;ReadPosRankSum=3.326;VQSLOD=4.3619;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,1:19:50.66:431,51,0	1/1:5,0:5:13.85:83,14,0	0/1:32,0:14:8.74:9,0,44	0/1:30,0:13:0.93:1,0,110	1/1:26,1:26:60.87:300,61,0	1/1:19,0:19:53.58:386,54,0	0/0:5,0:5:7.13:0,7,102	1/1:24,2:24:35.79:265,36,0	1/1:16,0:15:37.28:298,37,0	1/1:10,0:10:25.12:159,25,0	1/1:25,0:25:64.10:393,64,0	1/1:22,0:22:44.20:384,44,0	1/1:13,0:12:35.99:336,36,0	1/1:11,0:11:32.11:259,32,0	1/1:15,0:15:35.04:175,35,0	1/1:14,0:13:12.76:179,13,0	1/1:13,0:13:33.37:190,33,0	1/1:9,0:9:21.54:101,22,0	1/1:23,1:20:52.15:319,52,0	1/1:28,0:28:67.34:394,67,0	1/1:6,0:5:8.76:49,9,0	1/1:19,0:18:29.51:280,30,0	1/1:13,0:13:29.51:197,30,0	1/1:13,0:13:19.80:144,20,0	1/1:12,0:12:34.45:217,34,0	1/1:27,0:25:59.89:371,60,0	1/1:26,1:27:64.33:342,64,0	1/1:8,0:8:20.04:131,20,0
chr10	81073724	.	GTTTT	G	5462.78	PASS	AB=0.992;AC=41;AF=0.732;AN=56;BaseQRankSum=7.701;DP=488;FS=25.717;HRun=11;HaplotypeScore=208.4975;InbreedingCoeff=0.1667;MQ=48.58;MQ0=11;MQRankSum=-4.445;QD=13.04;ReadPosRankSum=7.589;VQSLOD=-0.0543;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:7.41:124,7,0	1/1:5,0:5:7.96:66,8,0	0/0:34,0:15:7.50:0,8,161	0/0:30,0:13:16.36:0,16,237	0/1:25,0:26:23.32:120,0,23	1/1:6,13:19:57.09:704,57,0	0/0:5,0:5:11.99:0,12,227	0/1:27,0:25:44.20:79,0,44	1/1:6,11:16:48.02:583,48,0	1/1:9,0:9:15.08:94,15,0	1/1:24,0:24:34.11:280,34,0	1/1:9,13:22:63.09:758,63,0	0/1:13,0:12:40.92:41,0,58	0/1:11,0:11:17.29:21,0,17	1/1:14,0:14:1.51:96,2,0	1/1:13,0:13:11.15:166,11,0	0/1:14,0:14:27.83:42,0,28	0/1:9,0:9:28.39:31,0,28	0/1:25,0:21:62.67:63,0,63	1/1:25,0:25:9.89:154,10,0	0/1:6,0:5:0.03:1,0,0	1/1:3,14:16:44.96:515,45,0	1/1:7,6:13:32.90:375,33,0	1/1:8,5:13:32.97:338,33,0	1/1:12,0:12:21.09:155,21,0	1/1:26,0:25:22.57:308,23,0	1/1:27,0:28:3.36:246,3,0	0/1:9,0:9:0.64:103,0,1
chr10	81073728	.	T	TG	1809.22	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-1.881;DP=475;FS=2.980;HRun=0;HaplotypeScore=196.4426;InbreedingCoeff=0.7938;MQ=42.66;MQ0=11;MQRankSum=-1.984;QD=13.81;ReadPosRankSum=3.328;VQSLOD=4.7318;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:1.15:88,1,0	0/0:6,0:6:14.88:0,15,78	0/0:29,0:11:21.90:0,22,179	0/0:30,0:13:3.36:0,3,142	0/0:26,0:25:69.67:0,70,398	1/1:18,1:19:54.35:322,54,0	0/0:4,0:4:12.03:0,12,151	0/0:24,0:22:33.57:0,34,256	1/1:16,2:17:48.86:320,49,0	0/0:8,0:8:8.59:0,9,80	0/0:23,0:23:48.88:0,49,291	1/1:19,3:22:60.46:413,60,0	0/1:12,0:11:9.99:10,0,127	0/0:11,0:11:3.09:0,3,100	0/0:14,0:14:28.31:0,28,178	0/0:14,0:13:33.03:0,33,170	0/0:16,0:16:43.82:0,44,270	0/0:11,0:11:26.15:0,26,147	0/0:24,0:20:50.29:0,50,304	0/0:24,0:24:58.68:0,59,336	0/0:6,0:5:10.20:0,10,50	1/1:15,1:15:42.16:244,42,0	1/1:10,4:14:34.93:304,35,0	1/1:7,6:13:32.03:299,32,0	0/0:13,0:13:34.93:0,35,188	0/0:23,0:22:45.38:0,45,250	0/0:29,0:29:67.56:0,68,432	0/0:9,0:9:23.07:0,23,125
chr10	81073733	.	GTT	G	4385.60	PASS	AB=0.992;AC=36;AF=0.643;AN=56;BaseQRankSum=1.007;DP=481;FS=4.755;HRun=12;HaplotypeScore=194.5545;InbreedingCoeff=0.6876;MQ=41.65;MQ0=10;MQRankSum=-3.541;QD=12.71;ReadPosRankSum=0.394;VQSLOD=1.4237;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:21.23:26,0,21	1/1:3,3:6:14.99:130,15,0	0/0:25,0:9:17.53:0,18,183	0/1:29,0:13:14.54:15,0,111	1/1:13,14:26:52.55:430,53,0	0/0:20,0:20:56.02:0,56,377	0/0:6,0:6:18.06:0,18,261	1/1:18,3:19:13.60:160,14,0	0/0:19,0:18:47.33:0,47,333	1/1:3,3:6:14.95:125,15,0	1/1:13,13:26:74.17:630,74,0	0/0:21,0:21:53.11:0,53,357	0/1:12,0:11:8.22:21,0,8	0/1:11,0:11:9.84:10,0,30	1/1:10,4:14:20.81:175,21,0	1/1:4,8:11:26.98:235,27,0	1/1:13,3:16:22.28:163,22,0	1/1:9,2:11:15.97:119,16,0	1/1:22,5:23:39.58:329,40,0	1/1:15,10:25:47.32:398,47,0	1/1:5,2:6:8.99:82,9,0	0/0:19,0:18:50.15:0,50,378	0/0:12,0:12:23.72:0,24,164	0/0:14,0:14:20.85:0,21,160	1/1:4,9:13:31.47:271,31,0	1/1:12,13:24:46.99:422,47,0	1/1:17,14:31:58.17:480,58,0	1/1:2,6:8:20.21:165,20,0
chr10	81073736	.	T	TG	1431.42	PASS	AB=0.805;AC=19;AF=0.339;AN=56;BaseQRankSum=1.564;DP=496;FS=39.076;HRun=0;HaplotypeScore=197.4635;InbreedingCoeff=-0.0527;MQ=45.00;MQ0=10;MQRankSum=-2.431;QD=4.99;ReadPosRankSum=3.705;VQSLOD=1.6332;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:27.52:0,28,139	0/1:5,1:6:3.98:50,0,4	0/0:27,0:11:0.20:0,0,179	0/0:29,0:12:23.52:0,24,199	0/1:23,5:27:38.52:163,0,39	0/0:22,0:22:62.14:0,62,664	0/0:6,0:6:18.05:0,18,235	0/1:19,5:22:54.25:132,0,54	0/0:19,0:18:50.55:0,51,587	0/1:5,2:7:12.32:44,0,12	1/1:19,8:27:41.55:265,42,0	0/0:21,0:21:62.79:0,63,686	0/0:13,0:12:23.16:0,23,175	0/0:11,0:11:11.39:0,11,87	0/1:12,3:15:22.65:23,0,112	0/1:10,2:11:24.22:25,0,24	0/1:10,6:16:48.23:95,0,48	0/1:6,4:10:32.89:75,0,33	0/1:20,9:25:48.63:176,0,49	0/1:17,7:24:34.12:135,0,34	0/1:5,2:6:12.13:36,0,12	0/0:19,0:18:54.11:0,54,651	0/0:12,0:12:35.74:0,36,356	0/0:13,0:13:27.45:0,27,293	1/1:11,3:14:13.89:135,14,0	0/1:22,5:26:31.03:80,0,31	0/1:28,5:33:93.20:93,0,157	1/1:6,2:8:5.14:77,5,0
chr10	81073737	.	T	TG	468.07	PASS	AB=0.657;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.138;DP=495;FS=30.607;HRun=0;HaplotypeScore=203.8092;InbreedingCoeff=-0.0238;MQ=45.14;MQ0=10;MQRankSum=1.613;QD=10.89;ReadPosRankSum=0.630;VQSLOD=2.1169;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,12:18:12:262,0,12	0/0:6,0:6:17.59:0,18,106	0/0:27,0:11:26.01:0,26,232	0/0:28,0:11:15.92:0,16,145	0/0:29,0:28:64.30:0,64,352	0/0:22,0:22:31.16:0,31,160	0/0:6,0:6:18.05:0,18,235	0/0:23,0:21:47.44:0,47,282	0/0:19,0:18:26.87:0,27,136	0/0:8,0:8:18.93:0,19,103	0/0:27,0:27:72.44:0,72,397	0/0:20,0:20:27.09:0,27,150	0/1:6,8:13:99:109,0,131	0/1:7,4:11:51.70:198,0,52	0/0:15,0:15:42.94:0,43,279	0/0:12,0:11:32.12:0,32,189	0/0:14,0:14:34.57:0,35,189	0/0:10,0:10:28.98:0,29,181	0/0:29,0:25:58.83:0,59,363	0/0:24,0:24:60.16:0,60,350	0/0:6,1:6:11.48:0,11,70	0/0:19,0:18:41.56:0,42,166	0/0:12,0:12:14.35:0,14,72	0/0:13,0:13:14.36:0,14,66	0/0:14,0:14:38.94:0,39,214	0/0:27,0:26:64.43:0,64,353	0/0:33,0:33:87.52:0,88,514	0/0:8,0:8:23.34:0,23,134
chr10	81073739	.	T	TG	1967.41	PASS	AB=0.714;AC=31;AF=0.554;AN=56;BaseQRankSum=-4.431;DP=454;FS=14.714;HRun=0;HaplotypeScore=184.6477;InbreedingCoeff=0.8532;MQ=48.41;MQ0=9;MQRankSum=-2.287;QD=8.03;ReadPosRankSum=-1.852;VQSLOD=2.3764;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:30.94:0,31,152	1/1:4,1:5:7.40:48,7,0	0/0:26,0:11:4.16:0,4,176	0/0:27,0:12:14.49:0,14,165	1/1:19,5:23:36.61:207,37,0	0/0:22,0:22:65.42:0,65,714	0/0:6,0:6:18.05:0,18,235	1/1:12,5:15:19.68:187,20,0	0/0:20,0:19:54.13:0,54,634	1/1:5,2:7:6.19:74,6,0	1/1:19,8:27:39.84:264,40,0	0/0:20,0:20:57.30:0,57,676	0/0:15,0:14:22.56:0,23,103	0/0:10,0:10:12.80:0,13,69	1/1:6,3:9:5.82:50,6,0	1/1:9,2:10:8.37:55,8,0	1/1:6,6:12:16.94:110,17,0	0/1:6,4:10:3.94:102,0,4	1/1:13,9:19:22.51:238,23,0	1/1:12,7:19:27.46:179,27,0	1/1:5,1:5:8.73:60,9,0	0/0:19,0:18:51.63:0,52,667	0/0:11,0:11:32.93:0,33,355	0/0:14,0:14:27.30:0,27,297	1/1:13,3:16:25.46:164,25,0	1/1:20,5:24:19.04:160,19,0	1/1:22,5:27:31.01:220,31,0	1/1:6,2:8:10.46:66,10,0
chr10	81074455	.	CT	C	16137.08	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.852;DP=671;FS=4.483;HRun=8;HaplotypeScore=66.4605;InbreedingCoeff=0.9978;MQ=75.63;MQ0=0;MQRankSum=-3.737;QD=25.66;ReadPosRankSum=3.838;VQSLOD=5.7334;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:37:99:985,102,0	1/1:2,11:13:33.05:319,33,0	0/0:9,0:9:25.59:0,26,258	0/0:15,0:15:21.05:0,21,233	1/1:1,30:32:89.17:845,89,0	1/1:2,33:35:99:956,99,0	0/0:18,0:18:45.11:0,45,518	1/1:4,28:32:84.09:802,84,0	1/1:0,22:22:57.09:550,57,0	1/1:2,33:36:99:962,101,0	1/1:2,24:26:69.10:665,69,0	1/1:1,21:22:63.10:608,63,0	1/1:1,31:32:69.11:666,69,0	1/1:0,14:14:39.06:377,39,0	1/1:2,27:29:81.13:782,81,0	1/1:1,34:35:96.15:927,96,0	1/1:2,28:30:81.13:782,81,0	1/1:0,12:12:36.06:348,36,0	1/1:4,24:28:72.11:695,72,0	1/1:2,26:28:72.11:695,72,0	1/1:2,21:23:57.09:551,57,0	1/1:0,15:15:42.07:405,42,0	1/1:0,17:17:45.07:434,45,0	1/1:0,23:23:60.10:579,60,0	1/1:4,23:27:63.09:608,63,0	1/1:1,26:27:78.12:753,78,0	1/1:2,19:21:54.09:522,54,0	1/1:1,12:13:33.05:319,33,0
chr10	81075910	.	TTGGGCTATGGGTCTGGGA	T	38097.44	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=10.114;DP=619;FS=0.483;HRun=0;HaplotypeScore=308.9276;InbreedingCoeff=0.9472;MQ=68.60;MQ0=0;MQRankSum=-11.976;QD=70.94;ReadPosRankSum=7.140;VQSLOD=3.6411;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,28:36:30.10:1483,30,0	1/1:2,10:12:21.07:1066,21,0	0/0:31,0:31:77.99:0,78,4530	0/0:26,0:26:66.23:0,66,4489	1/1:5,17:22:44.98:1752,45,0	1/1:4,21:25:45.15:2269,45,0	0/0:25,0:25:69.22:0,69,5238	1/1:7,19:26:56.97:1159,57,0	1/1:2,16:18:27.09:1332,27,0	1/1:6,8:14:24.05:983,24,0	1/1:3,13:16:27.05:1139,27,0	1/1:2,18:20:42.14:2131,42,0	1/1:5,23:28:48.16:2433,48,0	1/1:9,27:37:69.24:3498,69,0	1/1:6,24:30:45.15:2269,45,0	1/1:9,14:23:36.12:1826,36,0	1/1:6,15:21:24.08:1123,24,0	1/1:6,11:17:21.07:1066,21,0	1/1:7,11:18:35.92:814,36,0	1/1:3,12:15:30.10:1522,30,0	1/1:5,18:23:18.06:912,18,0	1/1:6,10:16:23.98:950,24,0	1/1:1,7:8:15.05:666,15,0	1/1:9,8:17:6.02:173,6,0	1/1:8,17:25:39.13:1977,39,0	1/1:4,26:30:63.02:1748,63,0	1/1:7,25:32:57.20:2892,57,0	1/1:1,7:8:18.06:914,18,0
chr10	81076204	.	C	CA	17052.58	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-3.373;DP=498;FS=15.000;HRun=0;HaplotypeScore=91.3249;InbreedingCoeff=0.9951;MQ=71.00;MQ0=2;MQRankSum=-3.810;QD=38.06;ReadPosRankSum=5.929;VQSLOD=3.3390;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:99:1498,99,0	1/1:0,9:9:21.07:321,21,0	0/0:15,0:15:24.45:0,24,281	0/0:18,0:17:50.06:0,50,602	1/1:1,12:13:24.08:367,24,0	1/1:0,22:22:48.16:733,48,0	0/0:17,0:17:48.15:0,48,646	1/1:0,21:21:63.13:850,63,0	1/1:0,10:10:27.09:413,27,0	1/1:1,17:18:51.05:665,51,0	1/1:0,15:15:39.13:595,39,0	1/1:0,25:25:60.20:918,60,0	1/1:0,24:24:63.21:964,63,0	1/1:0,26:26:66.22:1010,66,0	1/1:0,10:9:30.10:459,30,0	1/1:0,14:14:36.12:551,36,0	1/1:1,27:28:72.24:1096,72,0	1/1:1,14:14:33.11:493,33,0	1/1:0,10:9:24.08:353,24,0	1/1:0,15:15:33.04:477,33,0	1/1:0,29:29:66.22:1010,66,0	1/1:1,19:20:48.08:704,48,0	1/1:1,11:12:33.11:504,33,0	1/1:0,16:16:39.13:597,39,0	1/1:0,14:14:39.13:596,39,0	1/1:0,20:20:60.17:874,60,0	1/1:0,12:11:27.09:411,27,0	1/1:0,13:13:39.13:595,39,0
chr10	81076280	.	A	AC	6320.71	PASS	AB=0.961;AC=53;AF=0.946;AN=56;BaseQRankSum=-0.566;DP=552;FS=0.748;HRun=1;HaplotypeScore=150.6930;InbreedingCoeff=0.1842;MQ=61.76;MQ0=0;MQRankSum=4.865;QD=11.45;ReadPosRankSum=3.129;VQSLOD=3.3962;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:38:97.60:484,98,0	1/1:12,0:12:9.93:51,10,0	0/1:13,2:14:42.18:42,0,233	0/1:12,0:12:2.53:3,0,182	1/1:18,0:18:23.26:108,23,0	1/1:25,0:25:65.04:339,65,0	1/1:18,0:18:51.64:290,52,0	1/1:15,0:15:44.40:310,44,0	1/1:18,1:19:50.97:275,51,0	1/1:17,0:17:46.03:287,46,0	1/1:21,0:21:25.73:173,26,0	1/1:20,1:21:51.77:287,52,0	1/1:20,0:20:45.01:218,45,0	1/1:33,0:33:77.40:418,77,0	1/1:22,0:22:59.54:310,60,0	1/1:18,0:18:49.17:270,49,0	1/1:16,1:17:40.01:208,40,0	1/1:14,0:14:36.93:176,37,0	1/1:16,0:16:38.11:252,38,0	1/1:29,0:29:27.74:146,28,0	1/1:22,0:22:54.15:310,54,0	1/1:23,0:23:45.19:236,45,0	1/1:17,0:17:22.85:124,23,0	1/1:18,0:18:48.13:231,48,0	0/1:24,0:24:2.22:89,0,2	1/1:26,0:26:64.46:428,64,0	1/1:13,0:12:36.55:194,37,0	1/1:9,0:9:14.98:61,15,0
chr10	81076639	.	A	ATGTGT	41296.15	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=10.891;DP=583;FS=11.870;HRun=0;HaplotypeScore=271.3867;InbreedingCoeff=0.9956;MQ=50.40;MQ0=0;MQRankSum=-11.223;QD=80.03;ReadPosRankSum=3.815;VQSLOD=3.6434;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,16:24:63.22:1846,63,0	1/1:3,10:13:39.13:1193,39,0	0/0:23,0:23:59.35:0,59,1237	0/0:19,0:17:39.13:0,39,819	1/1:8,24:32:81.28:2411,81,0	1/1:8,9:17:42.14:1280,42,0	0/0:24,0:24:72.25:0,72,1586	1/1:19,7:26:69.24:2044,69,0	1/1:9,13:23:63.22:1865,63,0	1/1:10,22:32:90.31:2695,90,0	1/1:9,17:26:69.71:2070,70,0	1/1:2,12:15:45.15:1336,45,0	1/1:7,20:28:80.98:2349,81,0	1/1:14,11:25:63.19:1806,63,0	1/1:3,15:18:54.19:1655,54,0	1/1:5,17:22:63.22:1862,63,0	1/1:7,7:14:39.13:1015,39,0	1/1:5,5:10:27.09:805,27,0	1/1:6,8:14:30.10:862,30,0	1/1:10,16:26:72.23:2115,72,0	1/1:9,2:11:18.06:542,18,0	1/1:7,18:25:66.21:1951,66,0	1/1:4,18:22:65.89:1940,66,0	1/1:3,9:12:30.98:822,31,0	1/1:6,18:24:72.23:2104,72,0	1/1:11,15:26:78.25:2235,78,0	1/1:9,12:22:60.21:1785,60,0	1/1:4,4:8:24.08:707,24,0
chr10	81076640	.	T	TG	7847.01	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=11.069;DP=435;FS=19.675;HRun=0;HaplotypeScore=269.5335;InbreedingCoeff=0.9357;MQ=56.41;MQ0=0;MQRankSum=-11.650;QD=21.50;ReadPosRankSum=8.377;VQSLOD=1.4731;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:32.55:282,33,0	1/1:10,0:10:29.50:213,30,0	0/0:24,0:23:64.37:0,64,816	0/0:20,0:18:45.11:0,45,576	1/1:24,0:24:50.53:493,51,0	1/1:10,0:10:15.85:195,16,0	0/0:26,0:26:72.24:0,72,1006	1/1:7,0:7:17.93:139,18,0	1/1:16,0:16:44.91:367,45,0	1/1:26,0:26:65.70:526,66,0	1/1:18,0:18:52.76:420,53,0	1/1:13,0:13:35.97:268,36,0	1/1:24,1:25:60.17:573,60,0	1/1:12,3:15:29.21:259,29,0	1/1:15,0:15:44.72:357,45,0	1/1:18,0:18:53.50:434,54,0	1/1:10,0:10:26.78:250,27,0	1/1:5,0:5:13.01:85,13,0	1/1:9,1:10:23.93:210,24,0	1/1:19,0:19:50.12:368,50,0	1/1:2,0:2:5.99:49,6,0	1/1:20,0:20:59.74:503,60,0	1/1:19,1:20:54.65:428,55,0	1/1:11,0:11:25.11:186,25,0	1/1:19,0:19:56.31:432,56,0	1/1:18,0:18:53.76:433,54,0	1/1:13,0:13:35.74:283,36,0	1/1:4,0:4:11.97:94,12,0
chr10	81076641	.	TAATGAAA	T	3666.87	PASS	AB=0.983;AC=44;AF=0.786;AN=56;BaseQRankSum=11.587;DP=429;FS=34.484;HRun=0;HaplotypeScore=316.0807;InbreedingCoeff=0.3602;MQ=56.35;MQ0=0;MQRankSum=-9.968;QD=10.30;ReadPosRankSum=12.125;VQSLOD=0.1004;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:21.48:205,21,0	0/1:10,0:10:6.85:62,0,7	0/0:25,0:24:72.22:0,72,2354	0/0:21,0:19:48.16:0,48,1633	0/1:24,0:24:14.82:201,0,15	1/1:10,0:10:12.02:138,12,0	0/0:27,0:27:78.27:0,78,3050	1/1:7,0:7:17.61:109,18,0	1/1:16,0:16:31.81:155,32,0	1/1:23,3:26:69.87:454,70,0	1/1:18,0:18:10.14:120,10,0	0/1:13,0:13:1.48:89,0,1	1/1:24,0:24:51.05:257,51,0	1/1:14,0:14:23.44:150,23,0	1/1:15,0:15:24.76:154,25,0	1/1:18,0:18:13.99:159,14,0	1/1:10,0:10:1.74:53,2,0	0/1:5,0:5:7.33:37,0,7	1/1:9,0:9:20.64:131,21,0	0/1:16,2:18:6.81:147,0,7	1/1:2,0:2:5.54:25,6,0	1/1:19,0:19:33.09:188,33,0	1/1:20,0:20:1.85:141,2,0	1/1:10,0:10:7.37:127,7,0	0/1:18,0:18:0.63:129,0,1	1/1:16,0:16:42.46:220,42,0	1/1:13,0:13:23.27:150,23,0	1/1:4,0:4:11.67:66,12,0
chr10	81076646	.	A	AT	11659.11	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=12.689;DP=445;FS=10.707;HRun=0;HaplotypeScore=258.6548;InbreedingCoeff=0.9387;MQ=59.02;MQ0=0;MQRankSum=-11.982;QD=31.60;ReadPosRankSum=8.094;VQSLOD=1.9201;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:17:47.36:527,47,0	1/1:0,10:10:29.43:335,29,0	0/0:29,0:28:69.10:0,69,968	0/0:22,0:20:54.17:0,54,736	1/1:1,24:25:65.07:694,65,0	1/1:0,11:11:29.77:366,30,0	0/0:25,0:25:75.25:0,75,1049	1/1:0,7:7:18.06:243,18,0	1/1:5,14:19:48.11:580,48,0	1/1:3,22:25:63.21:839,63,0	1/1:0,17:17:49.44:589,49,0	1/1:4,13:17:38.43:428,38,0	1/1:1,22:23:65.68:816,66,0	1/1:2,11:14:31.91:394,32,0	1/1:0,15:15:44.81:556,45,0	1/1:1,17:18:53.47:629,53,0	1/1:1,7:8:20.80:237,21,0	1/1:2,5:7:12.66:133,13,0	1/1:2,8:10:24.04:301,24,0	1/1:2,16:18:44.62:478,45,0	1/1:0,2:2:6.02:78,6,0	1/1:1,21:22:56.51:675,57,0	1/1:0,21:21:59.21:668,59,0	1/1:0,9:9:24.48:264,24,0	1/1:2,17:19:56.13:630,56,0	1/1:1,15:16:48.10:613,48,0	1/1:2,12:14:37.25:430,37,0	1/1:0,4:4:12.04:158,12,0
chr10	81078001	.	A	AAGATGAAAT	39853.93	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-6.984;DP=498;FS=4.618;HRun=0;HaplotypeScore=107.2234;InbreedingCoeff=0.9045;MQ=80.81;MQ0=2;MQRankSum=-10.265;QD=89.76;ReadPosRankSum=3.500;VQSLOD=4.8434;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,10:20:36.12:1469,36,0	1/1:0,5:7:15.05:729,15,0	0/0:19,0:19:28.06:0,28,1095	0/0:19,0:19:45.06:0,45,1081	1/1:6,10:27:45:1844,45,0	1/1:3,12:25:45.15:2095,45,0	0/0:16,0:16:48.16:0,48,1402	1/1:11,11:40:99:3894,111,0	1/1:1,6:8:15.05:728,15,0	1/1:2,3:13:30.09:1109,30,0	1/1:4,12:19:51.11:2182,51,0	1/1:3,14:19:48.16:2146,48,0	1/1:2,20:29:66.23:3119,66,0	1/1:0,5:7:15.05:728,15,0	1/1:2,15:22:48.16:2253,48,0	1/1:2,11:15:33.11:1594,33,0	1/1:2,7:12:24.08:976,24,0	1/1:6,0:6:8.69:126,9,0	1/1:6,1:15:38.87:1447,39,0	1/1:3,10:21:41.87:1653,42,0	1/1:1,6:11:9.03:437,9,0	1/1:1,6:9:18.06:874,18,0	1/1:3,10:21:32.88:1601,33,0	1/1:1,10:16:21.07:1018,21,0	1/1:2,16:23:54.19:2529,54,0	1/1:3,13:21:60.10:2531,60,0	1/1:4,17:27:51.17:2479,51,0	1/1:0,5:8:6.02:292,6,0
chr10	81078204	.	T	TTAA	18485.61	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.375;DP=399;FS=11.520;HRun=0;HaplotypeScore=64.0054;InbreedingCoeff=0.7909;MQ=70.85;MQ0=0;MQRankSum=-4.978;QD=50.23;ReadPosRankSum=3.979;VQSLOD=6.7644;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,10:14:21.07:453,21,0	1/1:0,3:3:6.02:132,6,0	0/0:11,0:11:31.72:0,32,418	0/0:7,0:7:0.04:0,0,114	1/1:0,22:23:60.16:1186,60,0	1/1:1,14:16:33.11:727,33,0	0/0:13,0:13:39.13:0,39,625	1/1:1,31:34:96.29:1882,96,0	1/1:2,10:13:27.09:583,27,0	1/1:1,16:17:48.16:930,48,0	1/1:0,13:14:36.12:791,36,0	1/1:0,9:10:24.08:529,24,0	1/1:0,24:25:66.23:1445,66,0	1/1:0,15:15:42.14:915,42,0	1/1:0,12:12:30.10:661,30,0	1/1:0,12:13:30.10:661,30,0	1/1:1,18:19:45.15:992,45,0	1/1:1,11:13:27.09:595,27,0	1/1:1,13:15:42.14:795,42,0	1/1:1,15:17:36.12:737,36,0	1/1:0,12:12:30.57:662,31,0	1/1:0,10:10:24.08:528,24,0	1/1:1,6:7:12.04:264,12,0	1/1:0,2:3:3.01:66,3,0	1/1:1,13:17:36.12:793,36,0	1/1:0,14:15:45.15:970,45,0	1/1:1,22:24:39.13:858,39,0	1/1:0,7:7:15.05:330,15,0
chr10	81078983	.	CATT	C	6805.88	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=3.722;DP=466;FS=4.143;HRun=0;HaplotypeScore=120.0697;InbreedingCoeff=0.9551;MQ=81.87;MQ0=0;MQRankSum=-6.870;QD=30.25;ReadPosRankSum=0.135;VQSLOD=5.1255;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:27.09:0,27,589	1/1:1,2:3:9.03:131,9,0	0/0:20,0:21:37.18:0,37,913	0/0:24,0:24:6.25:0,6,687	1/1:4,8:11:24.06:310,24,0	0/0:22,0:22:45.02:0,45,844	0/0:21,0:21:57.20:0,57,1228	1/1:7,31:38:93.24:1391,93,0	0/0:30,0:30:90.19:0,90,1830	1/1:4,12:16:38.91:597,39,0	1/1:2,11:13:23.97:284,24,0	0/0:23,0:23:63.08:0,63,1178	0/0:16,0:16:39.05:0,39,790	0/0:18,0:18:45.15:0,45,946	1/1:3,14:17:39.13:568,39,0	1/1:1,8:9:21.07:299,21,0	1/1:0,12:10:24.08:369,24,0	1/1:3,3:6:9.03:143,9,0	1/1:4,10:14:24.08:357,24,0	1/1:3,16:18:36.12:537,36,0	1/1:3,9:11:14.96:175,15,0	0/0:18,0:18:35.99:0,36,657	0/0:18,0:17:41.77:0,42,903	0/0:15,0:15:14.95:0,15,326	1/1:1,10:11:26.83:324,27,0	1/1:2,12:14:33.06:502,33,0	1/1:2,15:17:48.13:678,48,0	1/1:9,3:12:9.03:142,9,0
chr10	81079011	.	GAA	G	4119.69	PASS	AB=0.921;AC=37;AF=0.685;AN=54;BaseQRankSum=-2.435;DP=509;FS=3.842;HRun=3;HaplotypeScore=188.1724;InbreedingCoeff=0.1482;MQ=52.74;MQ0=5;MQRankSum=0.158;QD=10.05;ReadPosRankSum=-1.424;VQSLOD=-0.1264;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,1:17:9.72:0,10,45	0/1:3,4:7:7.77:80,0,8	0/0:27,0:19:27.07:0,27,586	0/0:28,0:18:1.91:0,2,326	1/1:10,9:19:14.77:153,15,0	1/1:20,0:20:19.83:158,20,0	0/0:18,0:18:47.07:0,47,846	1/1:38,2:34:42.71:510,43,0	0/1:27,0:27:6.23:148,0,6	1/1:10,12:21:29.18:562,29,0	1/1:7,6:13:8.95:87,9,0	0/1:20,0:20:46.14:46,0,50	0/1:17,1:18:37.53:85,0,38	0/1:17,0:17:13.92:134,0,14	1/1:20,4:24:35.97:336,36,0	1/1:12,3:15:17.38:175,17,0	0/1:12,2:13:14.61:64,0,15	1/1:3,2:5:12.87:138,13,0	0/1:14,1:15:16.62:197,0,17	1/1:14,5:19:32.66:270,33,0	./.	0/1:16,1:15:8.43:27,0,8	0/1:19,1:18:13.74:46,0,14	1/1:13,1:14:4.98:48,5,0	1/1:9,6:15:2.99:25,3,0	1/1:11,7:17:24.72:379,25,0	1/1:13,15:28:25.97:371,26,0	1/1:2,1:3:6.02:83,6,0
chr10	81079019	.	G	GAC	1783.99	PASS	AB=0.927;AC=24;AF=0.444;AN=54;BaseQRankSum=-0.565;DP=521;FS=59.254;HRun=0;HaplotypeScore=194.5457;InbreedingCoeff=-0.5085;MQ=45.62;MQ0=9;MQRankSum=-1.332;QD=4.44;ReadPosRankSum=4.450;VQSLOD=0.9066;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:15:40.03:40,0,76	0/1:7,0:7:26.90:27,0,46	0/0:30,0:19:51.07:0,51,627	0/0:28,0:14:27.48:0,27,279	0/1:20,0:20:13.74:42,0,14	0/1:17,3:20:96.45:96,0,101	0/0:21,0:21:53.20:0,53,728	0/1:44,0:37:96.37:96,0,347	0/1:21,8:29:99:123,0,160	0/1:21,0:20:95.55:124,0,96	0/0:13,0:13:5.74:0,6,38	0/1:12,9:21:42.36:202,0,42	0/1:19,0:19:99:129,0,144	0/0:20,0:20:16.78:0,17,244	0/1:20,0:20:49.96:127,0,50	0/1:14,0:14:27.97:95,0,28	0/1:13,0:13:44.83:47,0,45	0/1:4,0:4:10.26:12,0,10	0/1:13,0:13:64.50:64,0,152	0/1:19,0:19:87.70:113,0,88	./.	0/1:14,3:15:7.01:90,0,7	0/1:11,8:17:33.54:34,0,72	0/1:10,5:15:41.61:44,0,42	1/1:14,0:14:5.99:49,6,0	0/1:18,1:18:45.50:147,0,45	0/1:28,0:28:76.25:152,0,76	1/1:7,0:7:11.87:91,12,0
chr10	81079176	.	A	AATACTACC	12446.13	PASS	AC=40;AF=0.952;AN=42;BaseQRankSum=-2.092;DP=190;FS=10.185;HRun=0;HaplotypeScore=48.7084;InbreedingCoeff=0.4682;MQ=31.43;MQ0=32;MQRankSum=-2.897;QD=85.84;ReadPosRankSum=2.302;VQSLOD=4.3470;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,3:9:9.03:280,9,0	1/1:3,4:6:15.05:565,15,0	./.	./.	1/1:2,5:7:12.04:525,12,0	./.	0/0:20,0:15:39.13:0,39,914	1/1:18,7:28:75.26:2941,75,0	./.	1/1:2,7:10:24.08:985,24,0	1/1:2,5:7:15.05:564,15,0	1/1:2,3:5:12.04:450,12,0	1/1:1,6:8:21.07:901,21,0	1/1:0,4:5:15.05:647,15,0	./.	1/1:1,1:2:3.01:132,3,0	1/1:3,0:3:3.01:131,3,0	./.	1/1:3,1:3:6.02:263,6,0	1/1:4,5:10:21.07:920,21,0	1/1:0,2:4:6.02:238,6,0	1/1:0,5:5:15.05:657,15,0	1/1:2,4:7:15.05:638,15,0	1/1:1,3:3:6.02:263,6,0	1/1:2,4:7:15.05:563,15,0	1/1:5,2:7:12:413,12,0	./.	1/1:3,1:4:9.03:369,9,0
chr10	81079230	.	GAGAGAGAGAC	G	1147.36	PASS	AB=1.000;AC=27;AF=0.750;AN=36;BaseQRankSum=-0.527;DP=215;FS=0.000;HRun=0;HaplotypeScore=51.6121;InbreedingCoeff=0.3392;MQ=22.81;MQ0=106;MQRankSum=-0.264;QD=10.82;ReadPosRankSum=0.226;VQSLOD=0.7507;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	1/1:7,0:5:2.22:7,2,0	0/1:17,0:8:6.07:6,0,75	1/1:9,0:2:5.92:39,6,0	1/1:6,0:5:2.92:18,3,0	1/1:7,0:4:11.94:93,12,0	0/0:5,0:3:1.25:0,1,3	1/1:14,0:12:5.13:91,5,0	0/0:7,0:6:0.88:0,1,2	./.	1/1:1,5:5:6.02:142,6,0	1/1:2,4:5:8.96:170,9,0	0/0:5,0:2:3.01:0,3,127	1/1:2,0:2:3.01:41,3,0	0/0:5,0:1:2.68:0,3,11	1/1:6,2:7:11.97:232,12,0	./.	./.	1/1:4,0:4:0.14:1,0,0	./.	./.	1/1:4,6:7:20.87:280,21,0	1/1:2,3:3:3.01:95,3,0	1/1:5,0:2:5.88:36,6,0
chr10	81079232	.	GAGAGAGAC	G	982.71	PASS	AB=1.000;AC=34;AF=0.850;AN=40;BaseQRankSum=1.150;DP=220;FS=0.000;HRun=0;HaplotypeScore=48.9122;InbreedingCoeff=0.2711;MQ=22.63;MQ0=110;MQRankSum=1.420;QD=7.12;ReadPosRankSum=-0.338;VQSLOD=1.1175;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	1/1:8,0:5:3.01:43,3,0	0/1:17,0:8:6.08:6,0,38	1/1:9,0:3:8.90:60,9,0	1/1:6,1:5:2.62:19,3,0	1/1:7,0:4:11.94:93,12,0	1/1:3,3:3:2.92:17,3,0	1/1:12,1:11:8.93:103,9,0	1/1:7,0:6:2.99:24,3,0	0/1:9,0:8:0:0,0,0	1/1:6,0:5:6.02:85,6,0	1/1:6,0:5:8.96:107,9,0	0/0:5,0:2:3.01:0,3,101	1/1:2,0:2:2.97:20,3,0	0/0:5,0:1:2.68:0,3,11	1/1:10,0:8:11.97:160,12,0	./.	./.	1/1:3,0:3:0.14:1,0,0	./.	1/1:8,0:5:3.41:19,3,0	1/1:10,0:7:20.87:230,21,0	1/1:5,0:3:3.01:62,3,0	1/1:5,0:2:5.88:36,6,0
chr10	81079234	.	GAGAGAC	G	996.89	PASS	AB=1.000;AC=33;AF=0.825;AN=40;BaseQRankSum=0.592;DP=230;FS=0.000;HRun=0;HaplotypeScore=49.8262;InbreedingCoeff=0.3002;MQ=22.84;MQ0=113;MQRankSum=1.590;QD=7.33;ReadPosRankSum=0.111;VQSLOD=1.4559;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:3:2.37:0,2,8	./.	./.	./.	./.	1/1:8,0:5:3.01:67,3,0	0/1:19,0:10:6.86:7,0,19	1/1:10,0:4:11.87:80,12,0	1/1:6,1:5:2.78:19,3,0	1/1:9,0:6:17.94:146,18,0	1/1:6,0:3:2.92:17,3,0	1/1:5,8:11:8.96:134,9,0	1/1:6,1:6:3.01:68,3,0	./.	1/1:6,0:5:5.97:52,6,0	1/1:6,0:5:8.95:78,9,0	0/0:7,0:2:3.01:0,3,73	1/1:2,0:2:2.97:20,3,0	0/0:4,0:1:2.74:0,3,12	1/1:11,0:9:11.94:113,12,0	./.	./.	1/1:3,0:3:0.34:1,0,0	./.	1/1:8,0:5:2.94:18,3,0	1/1:10,0:7:20.87:203,21,0	1/1:6,0:3:3.01:48,3,0	1/1:5,0:2:5.88:36,6,0
chr10	81079236	.	GAGAC	G	846.14	PASS	AB=1.000;AC=33;AF=0.825;AN=40;BaseQRankSum=0.738;DP=236;FS=0.000;HRun=0;HaplotypeScore=48.6555;InbreedingCoeff=0.2781;MQ=22.99;MQ0=115;MQRankSum=0.778;QD=5.68;ReadPosRankSum=-0.698;VQSLOD=1.4219;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:3:0:0,0,0	./.	./.	./.	./.	1/1:8,1:6:3.01:45,3,0	0/1:20,0:10:6.86:7,0,19	1/1:10,0:4:11.87:80,12,0	1/1:7,0:5:2.95:19,3,0	1/1:11,0:8:23.89:191,24,0	1/1:6,0:3:2.92:17,3,0	1/1:13,0:11:8.96:87,9,0	1/1:7,0:6:3.01:37,3,0	./.	1/1:6,0:5:5.89:37,6,0	1/1:6,0:5:8.88:58,9,0	0/0:7,0:2:3.01:0,3,50	1/1:2,0:2:2.97:20,3,0	0/0:5,0:1:2.74:0,3,12	1/1:11,0:9:11.83:87,12,0	./.	./.	0/1:4,0:4:0.17:0,0,0	./.	1/1:9,0:6:3.41:19,3,0	1/1:10,0:7:20.87:175,21,0	1/1:7,0:3:3.01:34,3,0	1/1:5,0:2:5.88:36,6,0
chr10	81079434	.	G	GGATGGATAGATA	730.79	PASS	AC=10;AF=0.833;AN=12;DP=274;FS=0.000;HRun=0;HaplotypeScore=54.4469;MQ=12.36;MQ0=236;QD=12.18;VQSLOD=1.3042;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:13,3:3:5.93:211,6,0	1/1:13,0:8:2.97:20,3,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:6,0:8:12:274,12,0	./.	./.	./.	./.	0/0:12,0:5:0:0,0,0	1/1:7,2:3:9.01:235,9,0	./.	1/1:11,0:4:8.90:60,9,0
chr10	81080301	.	CAA	C	1128.64	PASS	AC=18;AF=1.000;AN=18;DP=270;FS=0.000;HRun=3;HaplotypeScore=40.7768;MQ=13.31;MQ0=203;QD=12.68;VQSLOD=0.1828;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,6:2:6.02:91,6,0	./.	./.	1/1:0,11:7:3.01:45,3,0	./.	./.	./.	./.	./.	1/1:0,13:7:12.04:171,12,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:2,8:5:12.04:180,12,0	./.	1/1:1,7:3:9.03:136,9,0	1/1:1,14:8:20.43:280,20,0	./.	1/1:1,13:5:9.03:136,9,0	1/1:0,8:3:9.01:115,9,0	./.	1/1:0,4:1:3.01:46,3,0
chr10	81080311	.	TAGAGAGAGAC	T	844.63	PASS	AC=4;AF=0.222;AN=18;BaseQRankSum=3.572;DP=286;FS=0.000;HRun=0;HaplotypeScore=55.0864;MQ=13.69;MQ0=217;MQRankSum=-0.839;QD=42.23;ReadPosRankSum=0.887;VQSLOD=2.4439;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:2:6.02:0,6,304	./.	./.	0/0:12,0:7:3.01:0,3,152	./.	./.	./.	./.	./.	0/0:15,0:8:9.03:0,9,455	./.	./.	./.	./.	./.	./.	./.	./.	0/0:10,0:5:12.04:0,12,600	./.	1/1:2,5:3:9.03:284,9,0	1/1:4,9:8:21.07:654,21,0	./.	0/0:15,0:6:9.03:0,9,454	0/0:10,0:4:12.04:0,12,573	./.	0/0:9,0:5:3.01:0,3,154
chr10	81080517	.	A	AT	3391.53	PASS	AC=48;AF=0.960;AN=50;BaseQRankSum=2.930;DP=463;FS=0.000;HRun=7;HaplotypeScore=31.0494;InbreedingCoeff=0.2457;MQ=21.63;MQ0=237;MQRankSum=-1.031;QD=8.04;ReadPosRankSum=0.505;VQSLOD=-0.5785;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:11:15:164,15,0	1/1:1,7:6:18.06:217,18,0	./.	./.	1/1:4,22:15:9.03:109,9,0	1/1:4,15:9:8.99:92,9,0	0/0:8,0:6:9.01:0,9,87	1/1:6,13:8:15.05:181,15,0	./.	1/1:4,21:12:27.08:316,27,0	1/1:0,16:12:15.05:181,15,0	1/1:1,15:2:3.01:36,3,0	1/1:4,16:8:9.03:109,9,0	1/1:5,21:10:5.93:40,6,0	1/1:5,20:6:8.99:92,9,0	1/1:0,10:4:6.02:72,6,0	1/1:2,12:3:3.01:36,3,0	1/1:1,7:2:6.02:72,6,0	1/1:1,15:8:18.06:217,18,0	1/1:1,27:15:33.06:382,33,0	1/1:0,10:2:3.01:36,3,0	1/1:0,22:11:15.05:181,15,0	1/1:3,7:4:3.01:36,3,0	1/1:1,6:4:3.01:36,3,0	1/1:3,16:11:27.08:326,27,0	1/1:1,17:11:33.09:386,33,0	1/1:1,18:5:3.01:36,3,0	1/1:3,8:6:3.01:36,3,0
chr10	81080672	.	TA	T	9805.55	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=10.646;DP=443;FS=5.069;HRun=4;HaplotypeScore=110.2276;InbreedingCoeff=0.9302;MQ=77.09;MQ0=0;MQRankSum=-10.538;QD=25.74;ReadPosRankSum=3.634;VQSLOD=3.5521;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:14:33.10:395,33,0	1/1:0,3:3:9.03:108,9,0	0/0:26,0:26:78.24:0,78,1056	0/0:20,0:19:45.14:0,45,612	1/1:1,14:15:20.98:219,21,0	1/1:1,17:17:36.07:415,36,0	0/0:16,0:16:48.16:0,48,668	1/1:3,30:33:87.27:1043,87,0	1/1:1,19:17:39.12:467,39,0	1/1:2,13:15:39.11:457,39,0	1/1:0,14:14:36.07:415,36,0	1/1:0,13:9:24.07:288,24,0	1/1:1,22:23:54.13:632,54,0	1/1:0,13:11:21.02:235,21,0	1/1:1,18:18:51.16:611,51,0	1/1:1,19:18:42.13:503,42,0	1/1:0,23:21:54.17:647,54,0	1/1:0,10:7:15.05:180,15,0	1/1:2,17:15:33.10:396,33,0	1/1:1,8:9:24.03:271,24,0	1/1:1,17:16:42.13:503,42,0	1/1:1,8:9:21.02:235,21,0	1/1:2,8:10:5.98:57,6,0	1/1:0,12:8:18.01:199,18,0	1/1:1,9:10:27.08:323,27,0	1/1:0,10:10:30.09:360,30,0	1/1:1,15:15:39.08:451,39,0	1/1:0,11:11:33.10:396,33,0
chr10	81080696	.	G	GT	1419.62	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=3.364;DP=442;FS=55.797;HRun=4;HaplotypeScore=144.1445;InbreedingCoeff=0.9516;MQ=85.12;MQ0=0;MQRankSum=-6.668;QD=18.44;ReadPosRankSum=1.788;VQSLOD=-0.4148;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:9:17.97:0,18,175	0/0:4,0:4:11.99:0,12,121	0/0:19,0:19:13.54:0,14,322	0/0:26,0:26:15.79:0,16,536	0/0:12,0:12:15.04:0,15,170	1/1:7,12:15:36:417,36,0	0/0:21,0:21:54.15:0,54,610	0/0:30,0:24:57.16:0,57,645	1/1:3,16:13:36:444,36,0	0/0:11,0:10:30.09:0,30,339	0/0:14,0:14:24.07:0,24,271	1/1:1,11:6:15.05:204,15,0	0/0:23,0:20:54.11:0,54,596	0/0:15,0:11:26.88:0,27,245	0/0:25,0:19:42.12:0,42,475	0/0:19,0:16:42.08:0,42,461	0/0:22,0:20:41.42:0,41,425	0/0:10,0:7:21.06:0,21,238	0/0:23,0:18:48.07:0,48,512	0/0:9,0:9:15.04:0,15,170	0/0:12,0:9:18.05:0,18,204	1/1:2,10:12:21.07:276,21,0	1/1:1,3:4:8.94:99,9,0	1/1:2,9:7:14.96:162,15,0	0/0:12,0:12:27.08:0,27,306	0/0:12,0:9:21.06:0,21,238	0/0:22,0:15:27.03:0,27,291	0/0:8,0:8:15.04:0,15,169
chr10	81080716	.	GT	G	7142.92	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=9.277;DP=421;FS=94.015;HRun=7;HaplotypeScore=127.4445;InbreedingCoeff=0.8872;MQ=76.23;MQ0=0;MQRankSum=-10.385;QD=19.62;ReadPosRankSum=2.090;VQSLOD=-0.2620;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:11:8.83:281,9,0	1/1:2,4:6:12.02:122,12,0	0/0:15,0:15:35.51:0,36,398	0/0:24,0:24:59.45:0,59,672	1/1:0,9:9:27.06:275,27,0	1/1:0,15:11:33.07:336,33,0	0/0:18,0:18:51.16:0,51,642	1/1:3,23:15:33.03:336,33,0	1/1:3,14:11:27.05:274,27,0	1/1:0,15:13:39.09:398,39,0	1/1:4,7:11:21.05:214,21,0	1/1:0,13:7:18.04:184,18,0	1/1:2,18:17:45.10:457,45,0	1/1:1,16:10:27.06:275,27,0	1/1:1,21:16:42.09:426,42,0	1/1:3,18:17:39.07:396,39,0	1/1:8,12:18:23.87:244,24,0	1/1:2,6:5:12.03:122,12,0	1/1:3,19:17:42.08:428,42,0	1/1:2,9:11:27.05:273,27,0	1/1:2,4:3:3.01:31,3,0	1/1:0,15:15:42.09:428,42,0	1/1:0,6:6:18.04:182,18,0	1/1:1,8:5:15.03:153,15,0	1/1:0,13:13:39.09:397,39,0	1/1:2,11:10:24.03:237,24,0	1/1:1,23:15:45.10:458,45,0	1/1:0,7:7:21.05:214,21,0
chr10	81080733	.	TA	T	9716.10	PASS	AB=0.988;AC=45;AF=0.804;AN=56;BaseQRankSum=4.535;DP=510;FS=56.629;HRun=1;HaplotypeScore=144.4291;InbreedingCoeff=0.4459;MQ=79.70;MQ0=0;MQRankSum=-8.128;QD=21.83;ReadPosRankSum=-1.010;VQSLOD=0.8586;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,17:16:38.99:462,39,0	1/1:1,3:4:12.01:145,12,0	0/0:22,2:24:36.61:0,37,726	0/0:23,0:23:50:0,50,686	1/1:4,13:17:42.07:478,42,0	0/1:22,0:18:11.42:11,0,85	0/0:18,0:18:54.18:0,54,752	1/1:9,23:21:60.13:725,60,0	0/1:21,0:16:33.49:51,0,33	1/1:2,16:16:45.14:605,45,0	1/1:3,9:12:29.65:329,30,0	0/1:14,1:10:11.75:12,0,24	1/1:2,23:22:63.10:797,63,0	1/1:0,24:17:48.11:640,48,0	1/1:0,29:23:54.01:644,54,0	1/1:2,20:17:51.16:683,51,0	1/1:3,15:17:41.03:533,41,0	1/1:2,5:5:0.71:114,1,0	1/1:7,13:15:45:512,45,0	1/1:2,10:12:33.04:414,33,0	1/1:3,3:4:9.02:110,9,0	0/1:24,0:24:8.27:8,0,94	1/1:1,10:11:29.84:365,30,0	0/1:11,0:8:8.01:8,0,23	1/1:3,17:20:51.02:637,51,0	1/1:2,13:12:36.06:431,36,0	1/1:2,26:19:51.04:636,51,0	1/1:3,7:10:30.07:366,30,0
chr10	81081181	.	T	TA	14119.77	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=6.693;DP=509;FS=0.730;HRun=6;HaplotypeScore=143.8818;InbreedingCoeff=0.9641;MQ=72.31;MQ0=0;MQRankSum=-5.175;QD=30.56;ReadPosRankSum=2.968;VQSLOD=2.7634;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:63.17:773,63,0	1/1:1,4:5:12.04:151,12,0	0/0:22,0:16:26.79:0,27,264	0/0:12,0:12:20.79:0,21,205	1/1:4,24:28:54.17:679,54,0	1/1:1,19:20:51.16:641,51,0	0/0:13,0:13:36.08:0,36,367	1/1:7,27:34:81.25:1002,81,0	1/1:3,6:10:21.54:271,22,0	1/1:2,13:15:39.12:491,39,0	1/1:4,18:22:54.08:631,54,0	1/1:0,3:3:9.03:113,9,0	1/1:2,20:23:60.19:752,60,0	1/1:3,19:22:48.11:576,48,0	1/1:5,6:11:24.05:276,24,0	1/1:4,14:18:42.13:527,42,0	1/1:2,26:28:78.21:964,78,0	1/1:0,21:20:60.19:754,60,0	1/1:8,20:28:63.17:767,63,0	1/1:1,10:11:30.10:377,30,0	1/1:1,17:18:45.14:565,45,0	1/1:2,14:16:39.12:491,39,0	1/1:1,14:15:39.12:490,39,0	1/1:3,13:16:36.12:452,36,0	1/1:3,19:22:57.18:716,57,0	1/1:5,21:26:63.20:793,63,0	1/1:1,12:13:24.08:302,24,0	1/1:0,15:15:45.14:566,45,0
chr10	81081200	.	AGT	A	211.38	PASS	AB=0.988;AC=9;AF=0.167;AN=54;BaseQRankSum=1.168;DP=498;FS=0.000;HRun=0;HaplotypeScore=211.5981;InbreedingCoeff=0.3122;MQ=49.41;MQ0=12;MQRankSum=0.313;QD=1.99;ReadPosRankSum=1.508;VQSLOD=2.5402;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,3:22:15:143,15,0	0/0:5,0:5:2.09:0,2,23	./.	0/1:7,0:4:0:0,0,0	0/0:27,0:26:31.62:0,32,260	0/0:24,0:24:14.91:0,15,63	0/0:16,0:16:7.47:0,7,377	0/0:35,0:33:21.77:0,22,271	0/0:8,0:8:8.39:0,8,41	0/0:25,0:24:49.64:0,50,408	0/0:23,1:24:14.13:0,14,163	0/0:5,0:5:2.04:0,2,6	0/1:14,0:15:13.53:14,0,20	1/1:9,5:16:14.91:146,15,0	0/0:6,0:6:11.75:0,12,99	0/0:12,0:12:17.76:0,18,167	0/0:28,0:26:26.64:0,27,223	0/0:21,1:19:1.34:0,1,323	0/0:24,0:24:26.89:0,27,235	0/0:13,0:13:9.02:0,9,115	0/0:16,0:16:11.97:0,12,114	0/1:16,0:15:6.78:15,0,7	0/1:15,0:15:17.17:20,0,17	0/1:15,0:15:9.20:9,0,19	0/0:26,0:26:13.69:0,14,165	0/0:28,1:28:26.34:0,26,396	0/0:8,0:8:3.01:0,3,45	0/0:18,0:18:11.95:0,12,99
chr10	81081234	.	T	TGC	2936.27	PASS	AB=1.000;AC=49;AF=0.942;AN=52;BaseQRankSum=2.462;DP=470;FS=2.196;HRun=0;HaplotypeScore=219.1222;InbreedingCoeff=0.3809;MQ=37.20;MQ0=9;MQRankSum=-3.893;QD=6.60;ReadPosRankSum=-2.698;VQSLOD=2.6242;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:21.90:153,22,0	1/1:4,0:4:6.11:18,6,0	./.	./.	1/1:23,2:24:15.80:108,16,0	1/1:18,0:17:28.84:210,29,0	0/0:22,0:21:47.74:0,48,450	1/1:25,0:23:23.32:115,23,0	1/1:7,0:7:11.21:94,11,0	1/1:33,1:33:45.73:325,46,0	1/1:20,2:22:30.91:155,31,0	1/1:5,0:5:3.01:42,3,0	0/1:11,0:11:5.88:54,0,6	1/1:17,0:17:8.73:71,9,0	1/1:6,1:7:12.12:85,12,0	1/1:7,3:9:13.10:122,13,0	1/1:28,1:27:13.99:83,14,0	1/1:21,0:18:8.87:57,9,0	1/1:18,1:19:28.07:182,28,0	1/1:19,0:19:11.10:49,11,0	1/1:15,0:15:13.44:54,13,0	1/1:11,0:10:3.27:26,3,0	1/1:12,0:12:7.15:64,7,0	1/1:13,0:13:11.62:84,12,0	1/1:24,4:28:33.10:198,33,0	1/1:33,5:37:61.91:507,62,0	1/1:6,0:4:7.97:48,8,0	1/1:14,0:13:18.85:144,19,0
chr10	81081248	.	C	CGCGT	7556.06	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=7.115;DP=390;FS=5.291;HRun=0;HaplotypeScore=156.2532;InbreedingCoeff=0.6107;MQ=48.62;MQ0=0;MQRankSum=-4.352;QD=21.17;ReadPosRankSum=0.958;VQSLOD=4.2039;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:35.16:602,35,0	0/0:4,0:4:0.47:0,0,1	0/1:5,0:5:1.12:1,0,23	0/0:5,0:4:6.02:0,6,72	1/1:15,0:15:13.85:79,14,0	1/1:8,7:16:32.11:616,32,0	0/0:24,0:23:66.11:0,66,1053	1/1:23,0:23:55.48:514,55,0	1/1:4,1:7:12.04:230,12,0	1/1:25,0:25:51.22:808,51,0	1/1:18,0:18:14.49:125,14,0	1/1:0,0:5:3.01:37,3,0	1/1:9,0:9:8.84:219,9,0	1/1:16,0:16:29.29:304,29,0	1/1:5,0:5:6.02:92,6,0	1/1:7,0:6:12.03:170,12,0	1/1:19,0:19:18.41:209,18,0	1/1:12,0:11:26.85:311,27,0	1/1:16,0:16:41.70:481,42,0	1/1:10,0:10:8.97:75,9,0	1/1:13,0:13:5.59:55,6,0	1/1:7,1:8:5.72:106,6,0	1/1:5,4:9:15.04:283,15,0	1/1:6,4:11:14.06:268,14,0	1/1:23,0:23:32.64:355,33,0	1/1:30,0:30:83.64:1130,84,0	1/1:10,0:8:11.97:121,12,0	1/1:11,0:11:29.94:364,30,0
chr10	81081249	.	A	ACGCGTG	14303.84	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=1.671;DP=414;FS=2.540;HRun=0;HaplotypeScore=151.5651;InbreedingCoeff=0.5592;MQ=49.50;MQ0=0;MQRankSum=-4.787;QD=37.44;ReadPosRankSum=0.480;VQSLOD=4.6077;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:26.27:496,26,0	1/1:0,6:6:0.47:1,0,0	0/0:6,0:6:9.08:0,9,101	0/0:5,0:4:9.03:0,9,169	1/1:5,10:15:14.73:264,15,0	1/1:17,0:16:30.08:545,30,0	0/0:21,0:21:60.21:0,60,1419	1/1:7,24:33:87.29:1868,87,0	1/1:8,0:8:12.04:190,12,0	1/1:11,14:25:63.22:1913,63,0	1/1:4,14:18:12.04:254,12,0	1/1:4,0:4:3.01:45,3,0	0/1:9,0:9:12.46:160,0,12	1/1:18,0:18:0.33:187,0,0	1/1:0,5:5:6.02:212,6,0	1/1:1,6:6:12.04:359,12,0	1/1:12,11:23:30.55:693,31,0	1/1:11,3:13:27.05:657,27,0	1/1:9,8:17:39.12:1194,39,0	1/1:6,5:11:9.02:173,9,0	1/1:6,7:13:2.93:93,3,0	1/1:9,0:9:5.96:92,6,0	1/1:9,0:9:15.04:246,15,0	1/1:12,0:12:12.02:241,12,0	1/1:7,16:23:35.61:875,36,0	1/1:13,18:31:84.26:2466,84,0	1/1:5,4:7:15.02:248,15,0	1/1:6,6:12:30.99:831,31,0
chr10	81081419	.	GAGCTCAGATGGTCATTC	G	15512.21	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=9.069;DP=425;FS=11.521;HRun=0;HaplotypeScore=232.2839;InbreedingCoeff=0.6918;MQ=82.50;MQ0=0;MQRankSum=-9.352;QD=43.57;ReadPosRankSum=4.663;VQSLOD=2.8946;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,14:27:33.11:1306,33,0	1/1:1,4:5:9.03:422,9,0	0/0:17,0:17:27.07:0,27,1127	0/0:17,0:17:39.13:0,39,2239	1/1:12,15:27:30.10:1043,30,0	1/1:6,3:9:6.02:282,6,0	0/0:25,0:25:69.22:0,69,4896	1/1:21,0:21:3.01:51,3,0	1/1:5,11:16:30.10:1408,30,0	1/1:10,6:16:15.01:394,15,0	1/1:8,5:13:15.03:495,15,0	1/1:3,3:6:5.97:274,6,0	1/1:9,9:18:24.08:1126,24,0	1/1:8,7:15:15.05:704,15,0	1/1:4,6:10:18.06:845,18,0	1/1:8,6:14:15.05:704,15,0	1/1:11,6:17:12.04:515,12,0	1/1:10,2:12:3.01:141,3,0	./.	1/1:10,11:21:33.11:1446,33,0	1/1:15,3:18:6.02:149,6,0	1/1:3,2:5:6.02:211,6,0	1/1:8,7:15:15.05:688,15,0	1/1:11,5:16:9.03:422,9,0	1/1:9,5:14:15.05:658,15,0	1/1:10,13:23:30.10:1245,30,0	1/1:8,4:12:9.03:422,9,0	1/1:2,4:6:12.04:563,12,0
chr10	81084183	.	T	TACTC	14217.56	PASS	AC=46;AF=0.885;AN=52;BaseQRankSum=9.740;DP=301;FS=186.459;HRun=0;HaplotypeScore=192.3414;InbreedingCoeff=0.8116;MQ=96.72;MQ0=0;MQRankSum=-10.111;QD=59.99;ReadPosRankSum=5.022;VQSLOD=0.7547;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,2:2:6.02:161,6,0	0/0:13,0:13:36.12:0,36,644	0/0:26,0:27:59.63:0,60,1316	1/1:3,9:12:23.38:644,23,0	1/1:6,12:19:42.62:1129,43,0	0/0:16,0:16:42.14:0,42,796	1/1:9,11:20:60.12:1473,60,0	1/1:0,5:5:12.04:323,12,0	1/1:4,9:13:39.09:938,39,0	1/1:3,5:8:18.06:483,18,0	1/1:3,6:10:18.02:473,18,0	1/1:1,12:13:33.11:887,33,0	1/1:2,9:11:27.09:726,27,0	1/1:8,11:19:32.75:861,33,0	1/1:0,9:9:27.09:726,27,0	1/1:3,3:6:9.02:149,9,0	./.	1/1:3,4:8:18.02:421,18,0	1/1:1,13:14:39.13:1049,39,0	1/1:3,4:7:9.03:242,9,0	1/1:2,3:5:11.36:321,11,0	1/1:2,13:15:35.41:1042,35,0	1/1:1,3:4:6.02:139,6,0	1/1:3,5:9:17.94:481,18,0	1/1:4,7:11:21.03:505,21,0	1/1:5,10:16:36.12:966,36,0	1/1:0,1:1:3.01:81,3,0
chr10	81084200	.	G	GAGCCTCGC	21922.61	PASS	AC=44;AF=0.880;AN=50;BaseQRankSum=6.839;DP=294;FS=179.103;HRun=0;HaplotypeScore=196.6303;InbreedingCoeff=0.8208;MQ=101.01;MQ0=0;MQRankSum=-11.134;QD=95.73;ReadPosRankSum=5.381;VQSLOD=1.0743;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,1:5:5.23:122,5,0	./.	0/0:17,0:17:51.18:0,51,1449	0/0:26,0:26:78.24:0,78,2049	1/1:7,10:17:36.12:1536,36,0	1/1:3,10:13:36.12:1325,36,0	0/0:15,0:15:39.13:0,39,1029	1/1:8,10:18:48.10:1818,48,0	1/1:4,3:7:18.06:578,18,0	1/1:4,8:12:33.57:1245,34,0	1/1:6,5:11:21.07:882,21,0	1/1:1,11:12:27.09:1141,27,0	1/1:3,7:10:27.09:1119,27,0	1/1:5,6:11:24.08:886,24,0	1/1:4,11:15:39.08:1560,39,0	1/1:2,8:10:27.04:1119,27,0	1/1:2,4:6:6.02:271,6,0	./.	1/1:2,4:6:18.06:740,18,0	1/1:5,11:16:36.12:1547,36,0	./.	1/1:0,4:4:12.04:540,12,0	1/1:3,14:17:45.15:1964,45,0	1/1:2,3:5:6.02:270,6,0	1/1:4,7:11:27.09:1118,27,0	1/1:4,4:8:18.06:671,18,0	1/1:5,9:14:33.11:1335,33,0	1/1:0,1:1:3.01:136,3,0
chr10	81084240	.	A	AGAAAGCATTGGCTATAGTCTTGTT	1241.46	PASS	AB=0.708;AC=4;AF=0.67;AN=6;BaseQRankSum=-2.166;DP=10;FS=7.782;HRun=0;HaplotypeScore=56.8286;MQ=241.25;MQ0=0;MQRankSum=-1.214;QD=124.15;ReadPosRankSum=0.895;VQSLOD=1.7342;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:3,1:6:63.42:818,0,63	0/1:2,0:3:11.54:413,0,12	./.	./.	1/1:0,0:1:3.01:79,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	81084966	.	GTAGA	G	73.52	PASS	AB=0.891;AC=7;AF=0.194;AN=36;BaseQRankSum=1.165;DP=152;FS=8.377;HRun=0;HaplotypeScore=50.8511;InbreedingCoeff=0.2602;MQ=79.89;MQ0=0;MQRankSum=-2.681;QD=2.23;ReadPosRankSum=0.800;VQSLOD=0.2673;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:9:9.03:0,9,223	0/1:5,1:6:0:0,0,0	0/0:13,0:9:39.13:0,39,976	0/0:13,0:10:36.12:0,36,840	./.	./.	0/0:11,0:11:5.78:0,6,75	0/1:4,0:4:11.31:60,0,11	./.	0/1:3,0:3:5.35:47,0,5	./.	0/0:1,0:1:0:0,0,0	0/0:10,0:10:21.07:0,21,394	0/0:4,0:4:6.02:0,6,158	./.	./.	0/1:6,0:6:0:0,0,0	0/0:3,0:3:8.48:0,8,41	0/1:1,1:2:4.91:51,0,5	./.	./.	0/0:5,1:6:0.47:0,0,1	0/1:5,1:6:0:0,0,0	0/1:5,1:6:0:0,0,0	./.	0/0:1,0:1:2.68:0,3,11	0/0:4,0:4:0.47:0,0,1	./.
chr10	81084967	.	TAGATGG	T	170.16	PASS	AB=0.861;AC=12;AF=0.316;AN=38;BaseQRankSum=0.310;DP=154;FS=16.139;HRun=0;HaplotypeScore=53.5333;InbreedingCoeff=0.3128;MQ=84.49;MQ0=0;MQRankSum=-3.634;QD=3.87;ReadPosRankSum=1.586;VQSLOD=0.1530;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:20.90:0,21,388	1/1:6,0:6:2.66:20,3,0	0/0:15,0:11:45.15:0,45,1518	0/0:13,0:10:36.12:0,36,1165	./.	./.	0/0:11,0:11:17.82:0,18,193	0/1:2,1:4:26.17:68,0,26	./.	0/1:2,1:3:20.30:63,0,20	./.	0/0:1,0:1:0.47:0,0,1	0/0:10,0:10:24.01:0,24,554	0/0:4,0:4:8.96:0,9,233	1/1:7,0:7:2.97:20,3,0	./.	1/1:6,0:6:8.91:61,9,0	0/0:3,0:3:8.93:0,9,66	0/1:2,0:2:14.26:51,0,14	./.	./.	0/0:5,1:6:0.47:0,0,1	0/1:4,2:6:0:0,0,0	0/1:6,0:6:0:0,0,0	./.	0/0:1,0:1:2.96:0,3,19	0/1:4,0:4:0:0,0,0	./.
chr10	81085539	.	C	CA	1942.91	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.834;DP=518;FS=26.723;HRun=5;HaplotypeScore=65.7633;InbreedingCoeff=0.9953;MQ=86.12;MQ0=0;MQRankSum=1.218;QD=34.69;ReadPosRankSum=0.130;VQSLOD=1.5430;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,12:15:36.12:472,36,0	0/0:8,0:8:21.03:0,21,214	0/0:17,0:18:49:0,49,512	0/0:18,0:19:27.07:0,27,367	0/0:23,0:23:60.13:0,60,634	0/0:24,0:24:66.14:0,66,700	0/0:24,0:24:69.17:0,69,741	0/0:38,0:38:96.24:0,96,1032	0/0:9,0:9:27.07:0,27,290	0/0:16,0:16:48.12:0,48,514	0/0:17,0:17:48.12:0,48,513	0/0:14,0:14:42.11:0,42,451	1/1:1,18:19:57.18:745,57,0	1/1:0,22:22:66.21:868,66,0	0/0:21,0:21:51.10:0,51,538	0/0:11,0:11:33.08:0,33,355	0/0:12,0:12:30.03:0,30,310	0/0:17,0:17:45.11:0,45,483	0/0:28,0:28:78.20:0,78,838	0/0:32,0:32:84.21:0,84,901	0/0:8,0:8:21.05:0,21,225	0/0:18,0:18:54.14:0,54,579	0/0:16,0:16:45.11:0,45,482	0/0:8,0:8:24.06:0,24,258	0/0:15,0:15:42.10:0,42,447	0/0:21,0:21:54.14:0,54,580	0/0:27,0:27:78.19:0,78,838	0/0:18,0:18:42.08:0,42,441
chr10	81085738	.	A	AG	1658.49	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-4.735;DP=548;FS=3.631;HRun=0;HaplotypeScore=112.1763;InbreedingCoeff=0.9937;MQ=85.76;MQ0=0;MQRankSum=-3.942;QD=36.05;ReadPosRankSum=1.448;VQSLOD=3.2819;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:45.15:622,45,0	0/0:9,0:9:27.09:0,27,376	0/0:18,0:18:53.15:0,53,678	0/0:21,0:21:63.16:0,63,831	0/0:27,0:27:81.27:0,81,1133	0/0:23,0:23:69.23:0,69,956	0/0:15,0:15:45.13:0,45,611	0/0:35,0:35:99:0,102,1381	0/0:11,0:11:33.11:0,33,461	0/0:24,0:24:72.23:0,72,993	0/0:30,0:30:90.28:0,90,1232	0/0:22,0:22:66.22:0,66,916	1/1:1,13:14:42.14:567,42,0	1/1:1,15:16:46.03:612,46,0	0/0:18,0:18:54.18:0,54,754	0/0:11,0:11:33.11:0,33,460	0/0:12,0:12:36.12:0,36,503	0/0:16,0:16:48.16:0,48,668	0/0:20,0:20:51.17:0,51,713	0/0:29,0:29:81.24:0,81,1114	0/0:22,0:22:60.15:0,60,799	0/0:22,0:22:66.22:0,66,923	0/0:23,0:23:69.23:0,69,965	0/0:5,0:5:15.05:0,15,209	0/0:25,0:25:75.25:0,75,1049	0/0:27,0:27:78.25:0,78,1075	0/0:25,0:25:66.22:0,66,922	0/0:12,0:12:36.10:0,36,485
chr10	81085867	.	T	TC	1859.16	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.449;DP=401;FS=2.506;HRun=2;HaplotypeScore=155.5380;InbreedingCoeff=0.6686;MQ=92.34;MQ0=0;MQRankSum=-3.143;QD=25.82;ReadPosRankSum=0.941;VQSLOD=3.4665;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,12:17:41.77:457,42,0	0/0:7,0:7:15.04:0,15,82	0/0:23,0:23:46.07:0,46,589	0/0:19,0:20:40.83:0,41,563	0/0:22,0:22:17.39:0,17,83	0/0:20,0:20:30.85:0,31,158	0/0:17,0:17:51.14:0,51,618	0/0:17,0:17:19.70:0,20,119	0/0:11,0:11:22.81:0,23,78	0/0:15,0:15:3.03:0,3,55	0/1:8,0:8:8.92:9,0,19	0/0:18,0:18:37.74:0,38,148	1/1:3,26:29:81.22:964,81,0	1/1:5,13:18:45.01:574,45,0	0/0:10,0:10:13.32:0,13,54	0/0:10,0:10:12.23:0,12,60	0/0:6,0:6:8.07:0,8,24	0/0:6,0:6:3.93:0,4,26	0/0:18,0:18:42.57:0,43,200	0/0:16,0:17:33.88:0,34,141	0/0:5,0:5:8.93:0,9,65	0/0:10,0:10:17.79:0,18,72	0/0:15,0:15:28.65:0,29,110	0/0:11,0:11:13.82:0,14,40	0/0:12,0:12:15.76:0,16,64	0/0:7,0:7:4.24:0,4,28	0/0:23,0:24:43.42:0,43,174	0/0:8,0:8:9.65:0,10,46
chr10	81085869	.	C	CGG	5181.69	PASS	AB=0.800;AC=40;AF=0.714;AN=56;BaseQRankSum=5.044;DP=381;FS=0.000;HRun=0;HaplotypeScore=158.0340;InbreedingCoeff=0.7456;MQ=95.61;MQ0=0;MQRankSum=-8.233;QD=20.64;ReadPosRankSum=3.845;VQSLOD=4.8743;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:24.61:0,25,85	1/1:4,0:7:9.04:91,9,0	0/0:25,0:25:57.57:0,58,873	0/0:20,0:20:45.79:0,46,734	1/1:16,0:21:7.57:102,8,0	1/1:4,14:20:46.99:714,47,0	0/0:17,0:17:51.16:0,51,807	1/1:8,0:11:12.82:132,13,0	1/1:0,10:10:30.10:464,30,0	0/1:9,0:12:3.59:48,0,4	1/1:7,0:8:9.33:57,9,0	1/1:3,15:18:47.04:728,47,0	0/0:29,0:29:52.03:0,52,157	0/0:18,0:18:31.83:0,32,120	1/1:4,0:9:11.10:108,11,0	1/1:6,1:9:7.98:110,8,0	1/1:1,0:6:14.86:102,15,0	0/1:3,0:4:4.80:14,0,5	1/1:4,1:18:25.87:277,26,0	1/1:5,1:17:39.29:324,39,0	0/0:5,0:5:6.48:0,6,20	1/1:2,8:10:18.67:324,19,0	1/1:1,12:13:36.12:567,36,0	1/1:2,9:11:21.07:335,21,0	1/1:6,0:12:19.04:155,19,0	1/1:6,0:7:0.61:31,1,0	1/1:7,0:21:59.52:437,60,0	1/1:3,0:6:5.77:61,6,0
chr10	81085892	.	CGTCAGGAT	C	22415.57	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=9.163;DP=447;FS=5.239;HRun=0;HaplotypeScore=180.2678;InbreedingCoeff=0.8868;MQ=87.29;MQ0=0;MQRankSum=-11.583;QD=57.92;ReadPosRankSum=4.199;VQSLOD=4.5377;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,9:12:27.09:657,27,0	1/1:1,7:8:21.07:565,21,0	0/0:23,0:23:60.68:0,61,2434	0/0:23,0:23:63.22:0,63,2348	1/1:7,11:18:21.07:548,21,0	1/1:2,19:21:57.20:1534,57,0	0/0:14,0:14:42.14:0,42,1731	1/1:7,17:24:51.07:1308,51,0	1/1:4,11:15:33.11:889,33,0	1/1:1,14:15:39.12:994,39,0	1/1:2,8:10:21.07:547,21,0	1/1:4,19:23:48.16:1293,48,0	1/1:7,26:33:78.25:2046,78,0	1/1:0,23:23:63.22:1698,63,0	1/1:1,11:12:30.10:808,30,0	1/1:0,10:10:27.09:727,27,0	1/1:4,6:10:15.05:404,15,0	1/1:1,2:3:6.02:162,6,0	1/1:9,8:17:24.08:646,24,0	1/1:7,20:27:60.21:1601,60,0	1/1:1,3:4:3.01:80,3,0	1/1:1,9:10:30.09:750,30,0	1/1:1,20:21:54.19:1449,54,0	1/1:5,14:19:33.11:887,33,0	1/1:2,7:9:21.07:565,21,0	1/1:4,16:20:45.07:1044,45,0	1/1:8,11:18:33.11:888,33,0	1/1:0,4:4:12.04:323,12,0
chr10	81086896	.	CT	C	12719.57	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=12.004;DP=500;FS=1.362;HRun=3;HaplotypeScore=165.1846;InbreedingCoeff=0.9852;MQ=76.69;MQ0=0;MQRankSum=-13.286;QD=31.88;ReadPosRankSum=2.045;VQSLOD=3.9880;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.20:0,63,886	1/1:0,10:10:30.09:371,30,0	0/0:16,0:16:44.94:0,45,592	0/0:17,0:17:48:0,48,607	1/1:2,24:26:57.18:704,57,0	1/1:1,26:27:69.22:854,69,0	0/0:10,0:10:30.10:0,30,428	1/1:0,34:34:99:1262,102,0	1/1:0,16:16:48.15:593,48,0	1/1:1,14:15:42.13:520,42,0	1/1:1,23:24:60.19:742,60,0	1/1:2,13:15:39.12:483,39,0	0/0:11,0:11:33.11:0,33,468	0/0:25,0:25:75.25:0,75,1079	1/1:2,17:19:51.16:631,51,0	1/1:0,21:21:60.19:742,60,0	1/1:1,8:9:24.08:297,24,0	1/1:0,4:4:12.04:149,12,0	1/1:0,16:16:45.13:544,45,0	1/1:2,27:29:69.22:854,69,0	1/1:2,13:15:24.07:297,24,0	1/1:1,19:20:48.15:594,48,0	1/1:1,22:23:60.19:742,60,0	1/1:1,11:12:18.94:225,19,0	1/1:0,15:15:45.14:557,45,0	1/1:1,23:23:66.21:817,66,0	1/1:1,20:21:48.15:594,48,0	1/1:0,4:4:12.04:148,12,0
chr10	81086910	.	AT	A	5761.02	PASS	AB=0.529;AC=43;AF=0.768;AN=56;BaseQRankSum=13.859;DP=451;FS=8.089;HRun=1;HaplotypeScore=195.9491;InbreedingCoeff=0.8217;MQ=79.65;MQ0=0;MQRankSum=-13.255;QD=16.18;ReadPosRankSum=4.865;VQSLOD=4.7028;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.16:0,54,837	1/1:1,10:11:11.72:161,12,0	0/0:19,0:19:55.03:0,55,784	0/0:16,0:16:48.14:0,48,734	1/1:4,20:24:1.71:247,2,0	1/1:4,26:30:72.20:536,72,0	0/0:7,0:7:21.05:0,21,309	1/1:1,22:23:68.43:490,68,0	1/1:1,14:15:41.16:262,41,0	1/1:2,17:19:49.56:375,50,0	1/1:1,20:21:58.20:357,58,0	1/1:1,12:13:22.98:190,23,0	0/0:12,0:12:36.12:0,36,571	0/0:23,0:23:69.22:0,69,1079	1/1:0,14:14:40.96:240,41,0	1/1:0,17:17:49.26:306,49,0	1/1:0,9:9:6.03:120,6,0	1/1:0,3:3:8.91:62,9,0	1/1:0,14:13:35.75:261,36,0	1/1:1,20:21:46.92:331,47,0	0/1:1,8:9:15.49:78,0,15	1/1:3,15:18:17.64:233,18,0	1/1:0,20:20:34.85:300,35,0	1/1:3,9:12:19.40:141,19,0	1/1:3,16:19:26.62:311,27,0	1/1:1,17:17:50.43:349,50,0	1/1:1,21:22:31.96:334,32,0	1/1:0,4:4:11.86:80,12,0
chr10	81086913	.	T	TTC	13019.14	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=13.131;DP=480;FS=3.801;HRun=0;HaplotypeScore=189.6133;InbreedingCoeff=0.9858;MQ=75.95;MQ0=0;MQRankSum=-13.488;QD=33.64;ReadPosRankSum=1.375;VQSLOD=5.9651;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.18:0,54,876	1/1:1,10:11:33.04:389,33,0	0/0:17,0:17:48.14:0,48,759	0/0:16,0:16:48.16:0,48,748	1/1:5,20:25:68.02:728,68,0	1/1:4,26:30:81.28:1136,81,0	0/0:7,0:7:21.06:0,21,318	1/1:8,22:30:84.23:1104,84,0	1/1:3,14:17:45.79:577,46,0	1/1:1,17:18:54.16:729,54,0	1/1:0,20:20:57.17:691,57,0	1/1:3,12:15:42.06:494,42,0	0/0:13,0:13:39.11:0,39,608	0/0:22,0:22:66.23:0,66,1077	1/1:1,14:15:45.14:543,45,0	1/1:2,17:19:57.17:706,57,0	1/1:1,9:10:27.02:310,27,0	1/1:1,3:4:12.04:159,12,0	1/1:6,14:19:45.13:590,45,0	1/1:3,20:23:66.12:784,66,0	1/1:5,8:13:26.98:289,27,0	1/1:4,15:19:48.05:561,48,0	1/1:3,20:23:66.05:747,66,0	1/1:3,9:12:23.41:260,23,0	1/1:3,16:19:57.03:692,57,0	1/1:1,17:17:48.16:625,48,0	1/1:1,21:22:62.70:750,63,0	1/1:0,4:4:12.04:156,12,0
chr10	81087332	.	A	AT	15254.02	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-4.640;DP=583;FS=8.256;HRun=8;HaplotypeScore=70.6681;InbreedingCoeff=0.8731;MQ=74.19;MQ0=0;MQRankSum=-3.839;QD=27.63;ReadPosRankSum=2.669;VQSLOD=5.4209;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:24:29.88:593,30,0	1/1:0,8:8:24.07:277,24,0	0/1:11,0:12:1.62:2,0,140	0/0:19,0:19:38.81:0,39,340	1/1:4,27:31:84.21:954,84,0	1/1:3,26:29:47.76:803,48,0	0/0:12,0:12:33.02:0,33,302	1/1:12,33:45:99:1169,102,0	1/1:3,13:17:38.95:430,39,0	1/1:1,26:27:53.77:873,54,0	1/1:2,19:21:57.17:658,57,0	1/1:0,10:10:30.09:346,30,0	1/1:2,21:23:54.16:623,54,0	1/1:4,14:18:45.13:513,45,0	1/1:1,18:19:51.15:589,51,0	1/1:3,13:17:41.96:465,42,0	1/1:4,12:16:39.11:446,39,0	1/1:2,13:15:36.11:415,36,0	1/1:3,11:16:41.79:442,42,0	1/1:1,31:32:87.19:976,87,0	1/1:2,16:18:42.12:485,42,0	1/1:3,20:23:35.59:620,36,0	1/1:3,24:27:69.16:781,69,0	1/1:1,6:7:18.05:208,18,0	1/1:3,18:21:48.14:554,48,0	1/1:5,19:24:54.14:612,54,0	1/1:3,35:38:99:1177,102,0	1/1:4,9:13:21.06:242,21,0
chr10	81087549	.	C	CTGTT	4107.44	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.020;DP=674;FS=15.276;HRun=0;HaplotypeScore=169.5776;InbreedingCoeff=0.9902;MQ=70.43;MQ0=0;MQRankSum=-6.366;QD=54.77;ReadPosRankSum=0.365;VQSLOD=4.1342;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,17:28:20.44:1129,20,0	0/0:14,0:14:42.14:0,42,741	0/0:23,0:22:19.08:0,19,723	0/0:27,0:23:45.85:0,46,757	0/0:32,0:32:90.29:0,90,1560	0/0:29,0:29:66.22:0,66,1139	0/0:20,0:20:45.14:0,45,767	0/0:36,0:36:87.28:0,87,1469	0/0:17,0:17:39.07:0,39,653	0/0:31,0:31:84.27:0,84,1432	0/0:29,0:29:78.26:0,78,1334	0/0:20,0:20:45.15:0,45,795	1/1:4,20:24:60.17:1419,60,0	1/1:2,20:23:66.14:1560,66,0	0/0:20,0:20:51.17:0,51,901	0/0:19,0:19:51.12:0,51,864	0/0:30,0:30:81.28:0,81,1430	0/0:20,0:20:51.16:0,51,873	0/0:27,0:27:78.20:0,78,1273	0/0:29,0:29:72.25:0,72,1267	0/0:5,0:5:15.05:0,15,265	0/0:24,0:24:60.19:0,60,1024	0/0:19,0:19:47.95:0,48,743	0/0:14,0:14:30.09:0,30,486	0/0:18,0:18:45.15:0,45,795	0/0:27,0:27:75.25:0,75,1296	0/0:40,0:40:96.31:0,96,1649	0/0:27,0:27:66.23:0,66,1163
chr10	81087572	.	CTTCT	C	7379.16	PASS	AB=0.850;AC=45;AF=0.900;AN=50;BaseQRankSum=4.157;DP=640;FS=9.799;HRun=0;HaplotypeScore=157.0743;InbreedingCoeff=0.2472;MQ=60.31;MQ0=5;MQRankSum=-1.055;QD=13.69;ReadPosRankSum=2.231;VQSLOD=4.0493;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:23:29.30:90,0,29	1/1:6,6:12:18.06:277,18,0	./.	./.	1/1:13,17:30:42.10:621,42,0	1/1:13,0:27:24.03:222,24,0	0/0:24,0:23:33.11:0,33,763	./.	1/1:8,0:16:15.02:139,15,0	1/1:16,13:30:42.14:629,42,0	1/1:9,15:24:36.04:502,36,0	1/1:11,0:24:9.01:84,9,0	1/1:19,0:19:21.02:195,21,0	1/1:19,0:19:6.01:56,6,0	1/1:11,11:22:21.07:324,21,0	1/1:10,11:21:27.09:416,27,0	1/1:17,12:30:33.06:508,33,0	0/1:14,5:19:6.93:213,0,7	1/1:20,3:21:9.01:115,9,0	1/1:14,14:28:39.05:547,39,0	1/1:4,1:5:3.01:46,3,0	1/1:11,0:27:24.02:220,24,0	1/1:7,0:19:6.01:56,6,0	1/1:9,0:14:5.58:54,6,0	1/1:6,12:17:33.11:508,33,0	1/1:12,16:28:51.14:711,51,0	1/1:18,18:37:45.15:675,45,0	0/1:18,6:24:7.93:170,0,8
chr10	81087583	.	CTT	C	92.10	PASS	AB=0.938;AC=9;AF=0.161;AN=56;BaseQRankSum=14.497;DP=583;FS=4.564;HRun=3;HaplotypeScore=154.9881;InbreedingCoeff=-0.1947;MQ=56.65;MQ0=6;MQRankSum=-2.259;QD=0.49;ReadPosRankSum=9.900;VQSLOD=-0.7112;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:19,5:25:20.58:21,0,343	0/0:14,0:14:9.14:0,9,281	0/0:11,0:7:0.37:0,0,156	0/0:14,0:10:25.86:0,26,347	0/0:28,0:28:19:0,19,541	0/1:21,0:21:43.78:44,0,123	0/0:22,0:21:63.21:0,63,1050	0/0:30,0:27:75.25:0,75,1061	0/1:15,0:15:14.19:14,0,266	0/1:23,0:23:6.39:6,0,284	0/0:24,0:24:22.14:0,22,493	0/1:20,0:20:0.22:0,0,271	0/1:11,7:18:98.13:98,0,173	0/1:19,2:21:1.01:1,0,313	0/0:22,0:22:22.25:0,22,473	0/0:20,0:20:9.15:0,9,356	0/0:30,0:30:32.31:0,32,712	0/0:18,0:18:26.09:0,26,498	0/0:16,0:13:29.08:0,29,409	0/0:25,0:25:20.54:0,21,524	0/0:5,0:5:10.05:0,10,152	0/1:26,0:26:22.91:23,0,363	0/0:18,0:18:0.18:0,0,194	0/0:14,0:14:11.13:0,11,323	0/1:19,0:18:3.79:4,0,210	0/0:28,0:28:16.15:0,16,464	0/0:33,0:33:6.65:0,7,464	0/0:23,0:23:43.20:0,43,661
chr10	81087587	.	CTTTCTTTCTTTCTT	C	3929.27	PASS	AB=0.942;AC=9;AF=0.161;AN=56;BaseQRankSum=9.646;DP=571;FS=7.057;HRun=0;HaplotypeScore=269.4979;InbreedingCoeff=-0.2026;MQ=54.69;MQ0=7;MQRankSum=-8.914;QD=22.84;ReadPosRankSum=2.179;VQSLOD=1.6707;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,5:26:99:573,0,382	0/0:13,0:13:39.13:0,39,1358	0/0:10,0:5:2.23:0,2,56	0/0:11,0:6:15.04:0,15,196	0/0:29,0:29:87.30:0,87,2839	0/1:17,0:17:95.20:672,0,95	0/0:21,0:20:60.18:0,60,2871	0/0:31,0:28:74.05:0,74,1478	0/1:15,0:15:99:405,0,247	0/0:22,0:22:66.22:0,66,1956	0/0:24,0:24:72.23:0,72,2341	0/1:20,0:20:99:235,0,269	0/1:11,7:18:99:762,0,168	0/1:20,2:22:99:351,0,295	0/0:21,0:21:54.18:0,54,1704	0/0:21,0:21:51.17:0,51,1565	0/0:31,0:31:90.31:0,90,2724	0/0:17,0:17:48.01:0,48,1498	0/0:16,0:12:33.11:0,33,902	0/0:27,0:27:81.28:0,81,2642	0/0:5,0:5:15.05:0,15,380	0/1:24,0:24:99:622,0,369	0/1:17,0:17:99:158,0,193	0/1:13,0:13:99:151,0,211	0/0:19,0:18:51.13:0,51,1840	0/0:29,0:29:87.30:0,87,2764	0/0:32,0:32:81.25:0,81,2388	0/0:19,0:19:51.17:0,51,1326
chr10	81092564	.	T	TG	16316.49	PASS	AB=0.984;AC=47;AF=0.839;AN=56;BaseQRankSum=-12.495;DP=562;FS=9.583;HRun=0;HaplotypeScore=53.2299;InbreedingCoeff=0.6542;MQ=77.00;MQ0=0;MQRankSum=-4.168;QD=31.68;ReadPosRankSum=1.803;VQSLOD=3.9881;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:2.98:3,0,27	1/1:0,3:3:9.03:128,9,0	0/0:12,0:12:23.33:0,23,357	0/0:17,0:17:31.49:0,31,418	1/1:2,31:33:80.96:1018,81,0	1/1:0,31:31:81.27:1157,81,0	0/0:18,0:18:51.09:0,51,665	1/1:0,34:34:96.26:1298,96,0	1/1:0,18:18:45.15:643,45,0	1/1:0,19:19:57.13:773,57,0	1/1:0,24:24:65.98:863,66,0	1/1:0,16:16:42.14:600,42,0	0/1:28,0:28:12.72:13,0,62	0/1:19,1:20:23.37:23,0,26	1/1:0,20:20:51.17:729,51,0	1/1:0,16:16:36.04:515,36,0	1/1:0,27:27:66.22:942,66,0	1/1:2,15:17:39.09:533,39,0	1/1:0,26:26:78.22:1060,78,0	1/1:0,22:22:54.13:746,54,0	1/1:0,11:11:30.10:429,30,0	1/1:0,17:17:48.08:658,48,0	1/1:0,17:17:48.16:684,48,0	1/1:0,11:12:30.08:408,30,0	1/1:1,19:20:48.58:723,49,0	1/1:0,23:24:72.18:967,72,0	1/1:0,28:28:69.23:975,69,0	1/1:0,17:17:30.10:429,30,0
chr10	81092853	.	TTCTCTCTCTCTCTC	T	4077.72	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-7.740;DP=693;FS=11.318;HRun=0;HaplotypeScore=233.1954;InbreedingCoeff=0.3830;MQ=72.63;MQ0=24;MQRankSum=3.589;QD=22.04;ReadPosRankSum=1.090;VQSLOD=1.2509;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:27:1.45:657,0,1	0/0:10,0:9:17.88:0,18,246	0/0:47,0:29:11.39:0,11,107	0/0:56,0:27:11.05:0,11,230	0/0:31,0:31:15.02:0,15,181	0/1:17,0:17:5.34:182,0,5	0/0:16,0:15:26.34:0,26,274	0/0:38,0:38:46.92:0,47,551	0/1:30,0:30:55.88:676,0,56	0/0:16,0:16:29.45:0,29,423	0/0:18,0:18:18.52:0,19,304	1/1:33,0:33:36.03:954,36,0	1/1:22,0:22:2.53:531,3,0	0/1:32,0:32:2.60:711,0,3	0/0:21,0:22:29.95:0,30,380	0/0:25,0:25:47.31:0,47,519	0/0:26,0:24:32.57:0,33,498	0/0:19,0:18:29.99:0,30,370	0/0:23,0:23:24.50:0,25,303	0/0:25,0:24:42.01:0,42,596	0/0:27,0:24:27.03:0,27,335	0/0:4,11:15:2.60:0,3,10	0/0:6,4:10:3:0,3,25	0/1:21,0:21:14.42:367,0,14	0/0:24,0:24:36.09:0,36,591	0/0:25,0:24:40.65:0,41,712	0/0:22,0:18:30.03:0,30,384	0/0:10,0:7:6.02:0,6,125
chr10	81092878	.	T	TCG	2798.43	PASS	AB=0.744;AC=10;AF=0.179;AN=56;BaseQRankSum=1.107;DP=713;FS=4.444;HRun=0;HaplotypeScore=105.2563;InbreedingCoeff=-0.0697;MQ=47.44;MQ0=86;MQRankSum=5.089;QD=10.76;ReadPosRankSum=8.310;VQSLOD=2.7647;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:16,15:27:99:431,0,116	0/0:10,0:9:6.10:0,6,138	0/0:18,0:5:11.94:0,12,98	0/0:26,0:7:11.20:0,11,143	0/0:32,0:31:14.92:0,15,116	0/1:7,11:17:21.28:130,0,21	0/1:20,0:12:15.05:15,0,120	0/0:34,0:34:95.87:0,96,681	0/1:11,28:38:25.61:540,0,26	0/0:21,0:17:27.87:0,28,296	0/0:16,0:15:14.72:0,15,148	1/1:11,30:39:2.87:648,3,0	0/1:6,12:16:31.38:382,0,31	0/1:10,21:28:24.58:513,0,25	0/0:25,0:25:4.71:0,5,168	0/0:23,0:23:35.16:0,35,379	0/0:39,0:32:13.58:0,14,288	0/0:21,0:19:17.61:0,18,191	0/0:27,0:24:48.13:0,48,463	0/0:32,0:24:24.92:0,25,260	0/0:27,0:18:26.13:0,26,193	0/0:17,0:16:2.60:0,3,10	0/0:12,0:10:2.90:0,3,25	0/1:25,4:22:21.57:272,0,22	0/0:28,0:25:32.87:0,33,348	0/0:23,0:17:37.70:0,38,406	0/0:22,0:16:25.96:0,26,191	0/1:31,0:6:3.69:4,0,19
chr10	81092890	.	T	TCG	1076.83	PASS	AB=0.984;AC=23;AF=0.411;AN=56;BaseQRankSum=3.773;DP=642;FS=30.989;HRun=0;HaplotypeScore=108.1586;InbreedingCoeff=-0.4259;MQ=44.14;MQ0=86;MQRankSum=1.294;QD=2.05;ReadPosRankSum=3.832;VQSLOD=0.2863;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:25:14.49:14,0,249	0/1:7,1:7:46.51:47,0,68	0/0:2,0:1:2.97:0,3,20	0/0:3,0:1:2.98:0,3,22	1/1:27,0:26:5:22,5,0	0/1:13,0:12:8.54:21,0,9	0/1:23,0:13:24.52:25,0,44	0/1:32,0:30:0.26:0,0,131	0/1:35,0:33:58.28:91,0,58	0/1:22,1:19:80.90:125,0,81	0/1:16,0:15:37.99:44,0,38	0/1:44,0:40:52.14:52,0,172	0/1:20,0:18:46:46,0,151	0/1:26,0:23:45.03:45,0,65	0/1:22,3:25:56.46:163,0,56	0/1:20,0:20:79.55:80,0,99	0/1:37,2:32:54.15:83,0,54	0/0:17,0:15:7.54:0,8,61	0/1:23,0:20:50.46:171,0,50	0/0:32,0:24:20.51:0,21,160	0/1:26,0:18:3.17:26,0,3	0/0:19,0:17:2.64:0,3,24	0/1:12,0:9:0.02:0,0,0	0/1:30,0:23:17.29:17,0,93	0/0:23,0:20:17.67:0,18,139	0/1:22,0:16:97.68:98,0,201	0/0:20,0:15:0.91:0,1,101	1/1:31,1:5:3.01:54,3,0
chr10	81092892	.	TCG	T	1255.86	PASS	AB=0.984;AC=24;AF=0.462;AN=52;BaseQRankSum=-1.709;DP=630;FS=4.388;HRun=0;HaplotypeScore=107.5479;InbreedingCoeff=0.2411;MQ=43.88;MQ0=86;MQRankSum=-1.537;QD=3.20;ReadPosRankSum=-0.014;VQSLOD=2.2785;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:24:42.61:0,43,457	0/0:8,0:7:1.97:0,2,18	./.	./.	1/1:26,0:25:5.46:29,5,0	0/0:13,0:12:5.62:0,6,48	0/1:22,0:11:10.75:11,0,11	1/1:29,0:27:21.06:107,21,0	0/0:35,0:33:12.34:0,12,265	1/1:23,0:19:30.61:204,31,0	0/1:14,0:13:28.83:50,0,29	0/0:43,0:39:53.28:0,53,492	0/0:19,0:17:43.76:0,44,345	0/0:24,0:21:38.34:0,38,312	0/1:24,1:25:8.96:58,0,9	0/1:23,0:23:21.63:149,0,22	0/1:39,0:32:10.48:64,0,10	1/1:16,0:14:5.48:59,5,0	0/1:23,0:20:6.60:115,0,7	1/1:32,1:25:23.42:208,23,0	1/1:24,0:16:3.84:21,4,0	0/0:19,0:17:2.73:0,3,21	0/0:13,0:10:2.93:0,3,20	0/0:30,0:24:16.45:0,16,228	1/1:20,0:17:20.36:144,20,0	0/1:21,1:16:28.49:103,0,28	0/1:20,1:16:9.04:103,0,9	1/1:32,0:5:0.89:2,1,0
chr10	81092894	.	GCT	G	2715.21	PASS	AB=0.921;AC=24;AF=0.462;AN=52;BaseQRankSum=-4.341;DP=622;FS=7.208;HRun=0;HaplotypeScore=110.8401;InbreedingCoeff=0.4440;MQ=43.95;MQ0=87;MQRankSum=-0.572;QD=7.69;ReadPosRankSum=0.892;VQSLOD=2.9604;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:24:50.60:0,51,661	1/1:8,0:7:4.88:21,5,0	./.	./.	0/1:12,14:25:0.12:54,0,0	0/0:13,0:12:14.84:0,15,128	0/0:23,0:12:14.42:0,14,96	1/1:8,19:25:49.07:441,49,0	0/0:35,0:33:41.46:0,41,437	1/1:17,6:19:31.88:400,32,0	0/1:13,0:12:19.47:44,0,19	0/0:43,0:39:62.78:0,63,696	0/0:19,0:17:45.11:0,45,597	0/0:21,0:18:41.45:0,41,509	1/1:27,0:26:14.91:135,15,0	1/1:22,3:25:43.05:488,43,0	0/1:40,0:33:42.71:176,0,43	0/1:16,0:14:37.09:37,0,48	1/1:23,1:21:44.07:454,44,0	0/1:30,1:23:23.64:116,0,24	0/0:13,9:14:2.98:0,3,22	0/0:20,0:18:6.02:0,6,94	0/0:14,0:10:2.97:0,3,40	0/0:30,0:23:30.04:0,30,406	1/1:16,3:16:14.22:142,14,0	1/1:22,0:16:7.71:270,8,0	0/1:18,2:15:20.47:102,0,20	1/1:32,0:5:2.97:20,3,0
chr10	81092896	.	T	TCTCG	5550.65	PASS	AB=0.700;AC=25;AF=0.481;AN=52;BaseQRankSum=-7.524;DP=636;FS=11.346;HRun=0;HaplotypeScore=122.6117;InbreedingCoeff=0.4856;MQ=44.40;MQ0=89;MQRankSum=-2.623;QD=15.29;ReadPosRankSum=0.648;VQSLOD=4.1418;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:27:54.59:0,55,864	1/1:2,7:8:6.02:89,6,0	./.	./.	1/1:27,0:26:8.63:92,9,0	0/0:13,0:12:14.98:0,15,177	0/0:23,0:12:15.06:0,15,123	1/1:27,0:25:54.92:655,55,0	0/0:35,0:33:42:0,42,559	1/1:23,0:19:11.62:647,12,0	0/1:3,10:12:15.75:149,0,16	0/0:43,0:39:62.69:0,63,950	0/0:20,0:18:48.11:0,48,751	0/0:22,0:19:41.95:0,42,700	1/1:8,18:26:14.91:315,15,0	1/1:25,1:26:50.85:647,51,0	0/1:17,23:35:75.70:549,0,76	0/1:8,6:15:49.14:139,0,49	1/1:9,14:20:55.81:883,56,0	0/1:17,15:27:13.74:336,0,14	0/0:20,0:12:2.99:0,3,24	0/0:21,0:18:4.95:0,5,97	0/0:14,0:10:2.94:0,3,40	0/0:31,0:24:30.57:0,31,538	1/1:18,0:15:17.23:274,17,0	1/1:10,12:17:18.47:567,18,0	0/1:20,0:15:20.60:144,0,21	1/1:30,2:5:3.01:66,3,0
chr10	81092902	.	GCT	G	891.52	PASS	AB=0.968;AC=17;AF=0.327;AN=52;BaseQRankSum=3.191;DP=611;FS=15.671;HRun=0;HaplotypeScore=119.7714;InbreedingCoeff=0.1608;MQ=44.55;MQ0=87;MQRankSum=-1.406;QD=3.13;ReadPosRankSum=3.671;VQSLOD=1.1978;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:25:54.72:0,55,858	0/1:8,0:7:5.18:5,0,6	./.	./.	0/0:16,9:24:14.37:0,14,156	0/0:16,0:15:23.83:0,24,321	0/0:22,0:11:11.60:0,12,155	0/1:21,0:19:8.84:39,0,9	0/0:37,0:35:39.02:0,39,564	0/1:19,3:18:52.09:73,0,52	1/1:12,0:10:2.01:49,2,0	0/0:43,0:39:60.20:0,60,987	0/0:20,0:18:44.91:0,45,687	0/0:22,0:19:38.95:0,39,621	0/1:27,0:26:30.65:58,0,31	0/0:22,1:23:37.09:0,37,289	0/1:40,0:33:99:160,0,200	0/1:18,0:16:36.93:37,0,122	1/1:16,0:13:15.66:176,16,0	0/1:31,3:26:99:205,0,106	0/0:24,1:17:15.01:0,15,184	0/0:20,0:17:9.03:0,9,153	0/0:14,0:10:5.99:0,6,97	0/0:30,0:23:39.13:0,39,666	1/1:10,6:13:14.59:130,15,0	0/1:18,0:13:92.83:102,0,93	0/1:20,2:17:3.12:3,0,140	1/1:31,0:5:2.88:15,3,0
chr10	81093111	.	CTCCACCCCAA	C	37366.07	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=8.195;DP=561;FS=3.861;HRun=0;HaplotypeScore=200.3171;InbreedingCoeff=0.9479;MQ=82.97;MQ0=0;MQRankSum=-12.645;QD=76.10;ReadPosRankSum=4.770;VQSLOD=4.7159;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,33:36:78.27:2563,78,0	1/1:0,11:10:30.10:1017,30,0	0/0:25,0:25:72.22:0,72,3049	0/0:23,0:23:66.19:0,66,2934	1/1:2,28:30:69.19:2125,69,0	1/1:0,11:11:33.11:1118,33,0	0/0:22,0:22:63.22:0,63,3239	1/1:4,26:30:78.17:2138,78,0	1/1:3,27:30:72.25:2440,72,0	1/1:1,15:16:45.10:1364,45,0	1/1:0,23:23:57.02:1652,57,0	1/1:0,27:27:69.24:2338,69,0	1/1:0,19:19:48.16:1627,48,0	1/1:1,26:27:66.23:2236,66,0	1/1:1,28:29:69.17:2255,69,0	1/1:0,22:22:60.21:2033,60,0	1/1:3,10:13:24.08:813,24,0	1/1:1,5:6:12.04:407,12,0	1/1:5,11:16:33.09:923,33,0	1/1:3,18:21:51.09:1508,51,0	1/1:2,15:17:30.06:846,30,0	1/1:0,12:12:30.10:986,30,0	1/1:2,10:12:24.44:639,24,0	1/1:2,7:9:9.10:305,9,0	1/1:0,17:17:45.15:1497,45,0	1/1:1,19:19:54.16:1586,54,0	1/1:0,32:32:78.27:2644,78,0	1/1:1,4:5:9.03:304,9,0
chr10	81094444	.	T	TCA	5805.69	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-1.320;DP=946;FS=17.883;HRun=0;HaplotypeScore=175.1040;InbreedingCoeff=0.9853;MQ=63.39;MQ0=2;MQRankSum=-1.769;QD=29.17;ReadPosRankSum=3.170;VQSLOD=5.1698;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,120,1498	0/0:9,0:9:15.05:0,15,190	0/0:42,0:38:68.11:0,68,800	0/0:39,0:38:45.24:0,45,764	0/0:27,0:27:60.15:0,60,739	1/1:7,19:26:48.16:803,48,0	0/0:52,0:52:99:0,135,1686	0/0:35,0:35:54.16:0,54,676	1/1:5,32:37:69.18:1113,69,0	0/0:38,0:38:72.23:0,72,916	0/0:17,0:17:39.08:0,39,467	1/1:10,35:45:77.99:1280,78,0	0/0:36,0:36:93.11:0,93,1139	0/0:29,0:29:66.21:0,66,839	0/0:41,0:40:99:0,111,1380	0/0:44,1:45:64.14:0,64,1333	0/0:43,0:42:96.25:0,96,1174	0/0:19,0:19:54.15:0,54,668	0/0:20,0:20:42.12:0,42,515	0/0:24,0:24:63.19:0,63,800	0/0:77,0:77:99:0,187,2337	1/1:8,26:34:66.23:1094,66,0	1/1:7,18:25:48.16:803,48,0	1/1:5,27:32:9.54:714,10,0	0/0:32,0:32:87.24:0,87,1078	0/0:26,0:26:69.22:0,69,877	0/0:36,0:36:90.27:0,90,1131	0/0:7,0:7:21.07:0,21,267
chr10	81094506	.	G	GCACA	1568.76	PASS	AB=0.943;AC=15;AF=0.268;AN=56;BaseQRankSum=-1.138;DP=840;FS=0.000;HRun=0;HaplotypeScore=278.7660;InbreedingCoeff=0.5244;MQ=52.12;MQ0=9;MQRankSum=-2.198;QD=4.57;ReadPosRankSum=-6.355;VQSLOD=0.2117;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:33.62:0,34,969	0/0:9,0:9:21.04:0,21,218	0/1:51,0:18:16.11:16,0,216	0/1:50,0:18:12.01:12,0,227	0/0:29,0:29:62.62:0,63,690	1/1:7,7:19:7.87:85,8,0	0/0:51,0:51:99:0,136,2237	0/1:39,0:39:48.93:49,0,397	1/1:13,15:28:28.32:608,28,0	0/0:20,0:20:19.36:0,19,423	0/0:19,0:19:42.15:0,42,439	1/1:18,17:38:22.40:491,22,0	0/0:33,0:33:30.14:0,30,708	0/0:35,0:35:64.84:0,65,897	0/1:31,0:31:10.88:11,0,509	0/0:36,0:36:63.24:0,63,885	0/0:27,0:27:65.61:0,66,715	0/0:14,0:14:12.13:0,12,336	0/0:14,0:14:9:0,9,270	0/0:22,0:22:18.52:0,19,374	0/0:68,0:68:86.57:0,87,1342	1/1:16,17:33:9.23:173,9,0	0/1:16,7:25:4.65:174,0,5	1/1:12,10:26:9:128,9,0	0/0:26,0:26:31.99:0,32,516	0/0:15,0:15:12.05:0,12,321	0/0:22,0:22:56.90:0,57,614	0/0:9,0:9:21.02:0,21,222
chr10	81094508	.	ACG	A	1360.02	PASS	AB=0.971;AC=23;AF=0.411;AN=56;BaseQRankSum=-5.043;DP=837;FS=2.820;HRun=0;HaplotypeScore=246.1870;InbreedingCoeff=-0.3944;MQ=51.54;MQ0=10;MQRankSum=-0.791;QD=2.14;ReadPosRankSum=-10.612;VQSLOD=-0.0067;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:46,0:46:10.09:10,0,669	0/1:9,1:10:26.72:27,0,116	0/1:54,0:19:16.05:16,0,314	0/0:59,1:20:34.68:0,35,413	0/1:28,0:28:2.62:3,0,440	1/1:18,0:18:4.74:40,5,0	0/0:48,0:48:99:0,119,2119	0/1:38,2:40:99:383,0,213	0/1:27,0:27:11.05:110,0,11	0/1:20,1:21:45.50:45,0,248	0/1:19,0:19:1.13:1,0,289	0/1:36,0:36:31.68:90,0,32	0/1:33,1:34:38.30:38,0,430	0/1:31,4:35:99:119,0,534	0/1:29,0:29:24.21:24,0,386	0/0:35,0:35:1.97:0,2,595	0/1:25,1:26:23.03:23,0,449	0/0:14,0:14:11.97:0,12,247	0/1:14,0:14:15.15:15,0,187	0/0:21,0:21:9.10:0,9,237	0/1:65,3:68:99:197,0,808	1/1:31,0:31:10.30:93,10,0	0/1:25,0:25:7.81:104,0,8	0/1:26,0:26:13.73:17,0,14	0/1:25,2:27:99:128,0,310	0/0:14,0:14:8.78:0,9,212	0/1:20,2:22:34.79:35,0,397	0/0:9,0:9:18.42:0,18,146
chr10	81094534	.	A	ACACACACACG	1557.32	PASS	AB=0.862;AC=11;AF=0.196;AN=56;BaseQRankSum=4.007;DP=937;FS=1.881;HRun=0;HaplotypeScore=397.6820;InbreedingCoeff=0.5844;MQ=47.33;MQ0=21;MQRankSum=-5.757;QD=8.33;ReadPosRankSum=-0.965;VQSLOD=0.3048;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,99,2743	0/0:13,0:13:27.06:0,27,646	0/0:73,0:15:35.56:0,36,328	0/0:90,0:19:38.51:0,39,517	0/0:32,0:32:60.04:0,60,1448	1/1:18,4:22:5.72:104,6,0	0/0:48,0:48:99:0,131,3320	0/0:34,0:34:83.73:0,84,1643	1/1:27,3:30:2.78:553,3,0	0/0:28,0:28:69.05:0,69,1552	0/0:25,0:25:53.50:0,54,1500	0/1:30,9:39:1.06:993,0,1	0/0:32,0:32:66.17:0,66,1685	0/0:39,0:39:77.73:0,78,2018	0/0:28,0:28:56.97:0,57,1323	0/0:39,0:39:90.22:0,90,2305	0/1:27,0:27:4.86:5,0,1562	0/0:19,0:19:4.73:0,5,454	0/0:16,0:14:36.11:0,36,955	0/0:23,0:23:33.04:0,33,661	0/0:63,0:63:99:0,111,2091	1/1:20,8:29:0.38:1,0,0	0/1:12,5:17:0.10:0,0,0	1/1:22,1:23:0.69:21,1,0	0/0:31,0:31:77.91:0,78,1926	0/0:20,0:19:48.04:0,48,970	0/0:29,0:29:59.84:0,60,1356	0/0:11,0:11:18.95:0,19,547
chr10	81094536	.	A	ACACACACG	1050.87	PASS	AB=0.972;AC=10;AF=0.179;AN=56;BaseQRankSum=5.559;DP=944;FS=4.106;HRun=0;HaplotypeScore=376.9667;InbreedingCoeff=0.6615;MQ=47.46;MQ0=21;MQRankSum=-6.408;QD=6.65;ReadPosRankSum=-0.560;VQSLOD=0.9654;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,114,2520	0/0:14,0:14:33.05:0,33,641	0/0:72,0:15:35.90:0,36,350	0/0:90,0:19:31.97:0,32,476	0/0:34,0:34:63.11:0,63,1315	1/1:18,2:20:6.44:140,6,0	0/0:50,0:50:99:0,138,2973	0/0:35,0:35:89.52:0,90,1525	1/1:28,2:30:13.72:347,14,0	0/0:30,0:29:75.06:0,75,1434	0/0:25,0:25:56.93:0,57,1353	0/1:38,0:38:29.17:664,0,29	0/0:30,0:30:69.16:0,69,1516	0/0:38,0:38:78.23:0,78,1789	0/0:31,0:31:62.70:0,63,1239	0/0:38,0:38:99:0,99,2132	0/0:27,0:27:13.73:0,14,1388	0/0:20,0:20:4.49:0,4,332	0/0:17,0:15:36.11:0,36,840	0/0:24,0:24:36.04:0,36,628	0/0:62,0:62:99:0,116,1954	1/1:27,2:29:2.36:7,2,0	0/1:16,1:17:0.21:0,0,0	1/1:23,1:24:2.05:24,2,0	0/0:33,0:33:81.17:0,81,1721	0/0:20,0:19:51.04:0,51,884	0/0:30,0:30:65.86:0,66,1280	0/0:11,0:11:20.94:0,21,495
chr10	81094572	.	G	GCA	17942.70	PASS	AB=0.595;AC=46;AF=0.821;AN=56;BaseQRankSum=4.058;DP=839;FS=4.961;HRun=0;HaplotypeScore=240.9763;InbreedingCoeff=0.5222;MQ=52.09;MQ0=4;MQRankSum=-1.484;QD=24.02;ReadPosRankSum=2.231;VQSLOD=5.0036;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,33:58:95.25:1593,95,0	1/1:3,13:16:30.10:499,30,0	0/0:22,0:9:23.44:0,23,268	0/0:34,0:19:39.59:0,40,477	1/1:10,26:37:54.18:897,54,0	1/1:11,3:23:33.02:359,33,0	0/0:36,0:36:84.09:0,84,1046	1/1:13,20:34:19.29:800,19,0	1/1:10,1:28:44.90:418,45,0	0/1:12,20:31:38.36:1002,0,38	0/1:10,16:26:33.61:542,0,34	1/1:16,1:33:28.67:327,29,0	1/1:11,23:34:18.88:852,19,0	1/1:8,23:33:48.16:781,48,0	1/1:5,18:23:41.23:691,41,0	1/1:5,34:39:61.37:1533,61,0	1/1:8,21:29:62.21:967,62,0	1/1:6,17:23:45.15:748,45,0	1/1:11,12:24:42.13:671,42,0	1/1:4,21:26:20.37:673,20,0	1/1:10,33:43:69.23:1135,69,0	1/1:14,1:38:20.72:166,21,0	1/1:6,0:15:8.99:77,9,0	1/1:13,0:21:5.70:52,6,0	0/1:8,26:34:24.22:835,0,24	0/1:8,21:29:0.17:1045,0,0	1/1:7,25:32:58.04:932,58,0	1/1:4,10:16:21.07:349,21,0
chr10	81094844	.	A	AT	6912.27	PASS	AB=0.600;AC=35;AF=0.625;AN=56;BaseQRankSum=-2.334;DP=537;FS=3.923;HRun=10;HaplotypeScore=82.5781;InbreedingCoeff=0.8166;MQ=71.05;MQ0=0;MQRankSum=0.459;QD=18.53;ReadPosRankSum=-0.422;VQSLOD=5.3138;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:28:13.81:535,14,0	1/1:1,5:7:17.88:174,18,0	0/0:7,0:7:8.97:0,9,72	0/0:16,0:17:27.45:0,27,211	1/1:14,17:31:60.09:614,60,0	0/0:24,0:24:68.90:0,69,563	0/0:15,0:17:40.99:0,41,326	1/1:8,18:26:4.84:463,5,0	0/0:16,0:16:41.95:0,42,345	1/1:9,16:25:4.83:455,5,0	1/1:3,20:23:51.05:519,51,0	0/0:14,0:14:32.96:0,33,271	1/1:12,2:22:41.74:254,42,0	1/1:3,1:15:31.51:178,32,0	1/1:6,14:20:14.45:359,14,0	0/0:15,0:15:44.95:0,45,369	0/1:7,13:21:7.30:324,0,7	1/1:4,12:17:8.27:277,8,0	1/1:3,13:16:8.42:279,8,0	1/1:8,12:20:1.77:407,2,0	1/1:3,6:9:12.02:123,12,0	0/0:18,0:18:41.89:0,42,339	0/0:17,0:18:46.97:0,47,375	0/0:18,0:18:47.94:0,48,394	1/1:3,28:32:56.39:789,56,0	1/1:2,21:23:35.49:576,35,0	1/1:7,23:30:51.53:523,52,0	1/1:5,2:7:6.02:64,6,0
chr10	81094938	.	TTTGTTTTGG	T	20917.12	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=12.503;DP=500;FS=5.662;HRun=0;HaplotypeScore=152.2862;InbreedingCoeff=0.9895;MQ=68.18;MQ0=1;MQRankSum=-11.089;QD=63.39;ReadPosRankSum=1.978;VQSLOD=4.6841;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,5:15:37.93:756,38,0	1/1:1,11:12:23.95:603,24,0	0/0:27,0:25:68.54:0,69,1921	0/0:16,0:13:32.28:0,32,1160	1/1:2,33:35:78.12:1875,78,0	0/0:22,0:22:66.23:0,66,2965	0/0:15,0:15:45.15:0,45,1938	1/1:1,30:31:81.11:1785,81,0	0/0:19,0:19:54.19:0,54,2207	1/1:0,20:20:57.19:1505,57,0	1/1:0,15:15:44.95:1085,45,0	0/0:19,0:19:54.17:0,54,2361	1/1:1,22:23:50.86:1577,51,0	1/1:0,20:20:45.15:1291,45,0	1/1:0,18:16:30.10:929,30,0	1/1:0,21:21:45.15:1394,45,0	1/1:4,6:10:30.10:789,30,0	1/1:6,3:9:24.05:541,24,0	1/1:0,15:15:45.02:755,45,0	1/1:1,25:26:66:1551,66,0	1/1:0,7:7:12.04:320,12,0	0/0:15,0:15:39.13:0,39,1741	0/0:20,0:20:60.20:0,60,2318	0/0:17,0:17:51.13:0,51,2197	1/1:3,8:11:33.11:1019,33,0	1/1:1,14:14:39.12:1011,39,0	1/1:4,18:22:60.21:1761,60,0	1/1:0,5:5:12.04:371,12,0
chr10	81095071	.	AT	A	9376.48	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=12.555;DP=544;FS=11.121;HRun=7;HaplotypeScore=54.2398;InbreedingCoeff=0.9551;MQ=66.26;MQ0=0;MQRankSum=-1.099;QD=27.50;ReadPosRankSum=0.126;VQSLOD=4.8196;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.19:0,60,753	1/1:3,8:11:21.04:214,21,0	0/0:6,0:6:2.44:0,2,46	0/0:4,0:5:5.87:0,6,36	1/1:2,40:42:99:1192,117,0	0/0:21,0:21:63.20:0,63,793	0/0:16,0:16:42.13:0,42,528	1/1:3,27:30:81.18:826,81,0	0/0:14,0:14:42.13:0,42,528	1/1:2,24:26:72.16:735,72,0	1/1:1,24:25:63.14:643,63,0	0/0:19,0:19:51.15:0,51,629	0/0:22,0:22:63.19:0,63,779	0/0:28,0:28:84.27:0,84,1056	1/1:0,12:12:36.04:357,36,0	1/1:1,15:16:42.09:428,42,0	1/1:3,19:22:57.13:581,57,0	1/1:0,11:11:27.06:275,27,0	1/1:3,16:19:48.09:482,48,0	1/1:0,28:28:81.18:826,81,0	1/1:1,9:10:27.06:275,27,0	0/0:16,0:16:42.13:0,42,528	0/0:21,0:21:57.17:0,57,704	0/0:13,0:13:36.12:0,36,453	1/1:0,22:22:60.14:612,60,0	1/1:0,27:27:81.18:826,81,0	1/1:1,33:34:93.21:949,93,0	1/1:0,6:6:15.03:153,15,0
chr10	81095961	.	A	ATG	2526.36	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=-1.550;DP=442;FS=1.988;HRun=0;HaplotypeScore=152.7794;InbreedingCoeff=0.7503;MQ=58.29;MQ0=0;MQRankSum=-4.713;QD=19.00;ReadPosRankSum=0.916;VQSLOD=4.0039;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:24.06:0,24,286	0/0:7,0:7:12.38:0,12,122	0/0:11,0:10:15.05:0,15,186	0/0:12,0:11:12.59:0,13,158	0/0:17,0:17:26.91:0,27,315	1/1:10,12:22:15.73:476,16,0	0/0:14,0:14:17.80:0,18,223	0/1:24,0:24:23.92:24,0,431	1/1:1,9:10:21.07:345,21,0	0/0:27,0:27:33.07:0,33,649	0/0:25,0:26:41.86:0,42,486	1/1:3,12:16:14.03:456,14,0	0/0:17,0:17:24:0,24,285	0/0:14,0:14:26.92:0,27,337	0/0:15,0:15:29.87:0,30,332	0/0:16,0:16:41.20:0,41,436	0/0:5,0:5:9.03:0,9,111	./.	0/0:18,0:18:26.90:0,27,326	0/0:28,0:28:51.12:0,51,605	0/0:6,0:6:3.01:0,3,37	1/1:4,18:22:42.14:690,42,0	1/1:5,20:25:1.61:555,2,0	1/1:6,8:14:11.07:154,11,0	0/0:23,0:24:48.05:0,48,578	0/0:18,0:19:31.76:0,32,390	0/0:13,0:13:16.60:0,17,192	0/0:1,0:1:3.01:0,3,37
chr10	81095979	.	G	GAA	1000.83	PASS	AB=0.817;AC=15;AF=0.278;AN=54;BaseQRankSum=0.960;DP=313;FS=15.769;HRun=0;HaplotypeScore=65.2217;InbreedingCoeff=-0.4343;MQ=42.83;MQ0=0;MQRankSum=-5.740;QD=5.05;ReadPosRankSum=-3.172;VQSLOD=0.1516;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,1:11:8.28:8,0,212	0/1:4,3:7:51.68:52,0,97	0/0:4,0:3:9.02:0,9,117	0/0:8,0:7:17.41:0,17,208	0/1:11,3:14:27.50:28,0,272	0/0:14,2:16:3.24:0,3,175	0/1:4,3:7:66.10:66,0,145	0/1:17,4:21:99:180,0,739	0/0:9,0:9:20.24:0,20,158	0/1:15,1:16:12.68:13,0,681	0/0:18,1:19:38.94:0,39,477	0/1:12,2:14:27.52:28,0,205	0/1:10,2:12:89.31:89,0,276	0/1:10,2:12:56.61:57,0,317	0/1:8,4:12:54.74:55,0,287	0/1:10,5:15:99:138,0,370	0/0:3,0:3:6.02:0,6,78	./.	0/1:9,1:10:33.79:34,0,340	0/0:16,0:16:45.10:0,45,597	0/0:2,0:2:3.01:0,3,38	0/0:15,0:15:41.01:0,41,276	0/0:14,0:14:38.38:0,38,368	0/0:7,1:8:5.78:0,6,34	0/1:17,5:22:74.51:75,0,468	0/1:10,5:15:99:262,0,358	0/1:7,3:10:66.48:66,0,272	0/0:1,0:1:3.01:0,3,41
chr10	81096935	.	G	GATTGGTTATTA	10269.70	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-4.179;DP=604;FS=2.981;HRun=0;HaplotypeScore=183.8032;InbreedingCoeff=0.9966;MQ=90.19;MQ0=0;MQRankSum=-11.705;QD=78.39;ReadPosRankSum=-2.037;VQSLOD=4.1229;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.17:0,57,1798	0/0:11,0:11:33.11:0,33,1018	0/0:31,0:31:72.16:0,72,2034	0/0:23,0:23:42.10:0,42,1315	0/0:33,0:33:81.28:0,81,2646	1/1:19,10:32:48.16:2342,48,0	0/0:15,0:15:33.11:0,33,1090	0/0:31,0:31:72.19:0,72,2051	1/1:14,9:25:42.14:2198,42,0	0/0:27,0:27:69.23:0,69,2157	0/0:17,0:17:42.10:0,42,1178	1/1:18,5:23:30.10:1512,30,0	0/0:23,0:23:45.14:0,45,1419	0/0:18,0:18:36.11:0,36,1072	0/0:21,0:21:54.19:0,54,1767	0/0:26,0:26:66.23:0,66,2093	0/0:21,0:21:57.20:0,57,1878	0/0:12,0:12:33.11:0,33,1024	0/0:23,0:23:39.13:0,39,1281	0/0:25,0:25:66.23:0,66,2167	0/0:16,0:16:39.13:0,39,1276	1/1:10,7:17:27.09:1452,27,0	1/1:11,11:23:39.13:2014,39,0	1/1:7,3:11:16.30:751,16,0	0/0:21,0:21:54.19:0,54,1736	0/0:24,0:24:57.19:0,57,1726	0/0:26,0:26:51.17:0,51,1701	0/0:9,0:9:24.08:0,24,803
chr10	81097123	.	ACTTCATTTTAGAAGAATT	A	11453.71	PASS	AC=34;AF=0.654;AN=52;BaseQRankSum=10.918;DP=201;FS=8.651;HRun=0;HaplotypeScore=184.9028;InbreedingCoeff=0.9091;MQ=85.23;MQ0=0;MQRankSum=-8.504;QD=118.08;ReadPosRankSum=4.780;VQSLOD=3.8761;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,2:3:9.03:336,9,0	1/1:0,2:2:6.02:286,6,0	0/0:10,0:10:30.10:0,30,2009	0/0:8,0:8:21.07:0,21,1283	1/1:0,9:9:24.08:1135,24,0	0/0:22,0:21:66.23:0,66,5370	0/0:7,0:7:21.07:0,21,1664	1/1:3,0:3:9:80,9,0	0/0:16,0:16:48.16:0,48,3688	1/1:0,6:6:18.06:874,18,0	1/1:0,8:8:24.08:1072,24,0	0/0:9,0:9:27.09:0,27,2002	1/1:0,3:3:9.03:420,9,0	1/1:2,6:8:24.08:884,24,0	1/1:2,3:5:15.04:492,15,0	1/1:0,6:6:18.06:840,18,0	1/1:1,2:4:9.01:305,9,0	./.	1/1:1,3:4:9.03:438,9,0	1/1:1,6:7:18.01:729,18,0	./.	0/0:10,0:10:30.10:0,30,2502	0/0:15,0:15:45.15:0,45,3789	0/0:6,0:6:18.06:0,18,1430	1/1:0,6:6:18.06:841,18,0	1/1:3,7:10:29.87:1083,30,0	1/1:2,9:11:33.10:1348,33,0	1/1:0,2:2:6.02:291,6,0
chr10	81097143	.	GA	G	479.02	PASS	AC=32;AF=0.640;AN=50;BaseQRankSum=11.355;DP=179;FS=4.745;HRun=1;HaplotypeScore=155.0118;InbreedingCoeff=0.8509;MQ=86.87;MQ0=0;MQRankSum=-10.034;QD=5.99;ReadPosRankSum=6.363;VQSLOD=0.8386;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:4.99:18,5,0	1/1:0,2:2:4.99:18,5,0	0/0:10,0:10:27.09:0,27,426	0/0:7,0:7:17.65:0,18,250	1/1:0,9:9:19.07:65,19,0	0/0:25,0:24:75.26:0,75,1194	0/0:10,0:10:30.10:0,30,478	./.	0/0:11,0:11:33.11:0,33,523	1/1:0,6:6:15.84:65,16,0	1/1:0,8:8:18.18:60,18,0	0/0:8,0:8:24.08:0,24,383	1/1:0,3:3:5.87:18,6,0	1/1:0,6:6:13.53:45,14,0	1/1:0,3:3:7.49:26,7,0	1/1:0,6:6:14.70:50,15,0	1/1:0,2:2:4.72:16,5,0	./.	1/1:0,3:3:8.09:34,8,0	1/1:0,6:6:11.08:37,11,0	./.	0/0:9,0:9:27.09:0,27,432	0/0:15,0:15:45.15:0,45,719	0/0:4,0:4:12.04:0,12,192	1/1:0,6:6:14.51:50,15,0	1/1:0,7:7:18.34:73,18,0	1/1:0,9:9:22.49:81,22,0	1/1:0,2:2:5.19:21,5,0
chr10	81097145	.	TGCA	T	2032.65	PASS	AC=32;AF=0.640;AN=50;BaseQRankSum=11.328;DP=178;FS=5.959;HRun=0;HaplotypeScore=157.1794;InbreedingCoeff=0.8874;MQ=88.94;MQ0=0;MQRankSum=-9.800;QD=25.41;ReadPosRankSum=6.801;VQSLOD=3.0438;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:6:52,6,0	1/1:0,2:2:6.01:59,6,0	0/0:10,0:10:30.10:0,30,663	0/0:8,0:8:18.06:0,18,443	1/1:0,9:9:24.01:220,24,0	0/0:24,0:23:72.25:0,72,1730	0/0:10,0:10:30.10:0,30,740	./.	0/0:10,0:10:30.10:0,30,697	1/1:0,6:6:18.02:170,18,0	1/1:0,8:8:24.03:245,24,0	0/0:8,0:8:24.08:0,24,590	1/1:0,3:3:9.02:100,9,0	1/1:0,6:6:18.02:182,18,0	1/1:0,3:3:9:78,9,0	1/1:0,6:6:18.01:168,18,0	1/1:0,2:2:6.01:63,6,0	./.	1/1:0,3:3:9.01:83,9,0	1/1:0,6:6:15.02:150,15,0	./.	0/0:9,0:9:27.08:0,27,617	0/0:15,0:15:45.15:0,45,1082	0/0:4,0:4:12.04:0,12,275	1/1:0,6:6:18.01:168,18,0	1/1:0,7:7:21.02:194,21,0	1/1:0,9:9:27.01:245,27,0	1/1:0,2:2:6:54,6,0
chr10	81097152	.	TTG	T	795.30	PASS	AB=0.500;AC=31;AF=0.620;AN=50;BaseQRankSum=11.241;DP=177;FS=4.933;HRun=0;HaplotypeScore=157.9933;InbreedingCoeff=0.8150;MQ=87.28;MQ0=0;MQRankSum=-9.305;QD=9.82;ReadPosRankSum=7.916;VQSLOD=2.5270;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:5.72:29,6,0	1/1:0,2:2:5.55:26,6,0	0/0:8,0:8:24.08:0,24,458	0/0:9,0:9:16.12:0,16,259	1/1:0,9:9:7.61:84,8,0	0/0:25,0:24:75.26:0,75,1425	0/0:10,0:10:30.10:0,30,561	./.	0/0:9,0:9:24.06:0,24,427	1/1:0,6:6:17.40:97,17,0	1/1:0,8:8:17.75:76,18,0	0/0:9,0:9:24.08:0,24,462	1/1:0,3:3:7.89:32,8,0	1/1:0,6:6:14.48:64,14,0	1/1:1,3:3:8.63:45,9,0	1/1:0,6:6:15.85:78,16,0	1/1:0,2:2:5.06:21,5,0	./.	1/1:0,3:3:8.70:48,9,0	0/1:0,6:6:1.52:41,0,2	./.	0/0:8,0:8:24.08:0,24,452	0/0:14,0:14:42.14:0,42,809	0/0:4,0:4:12.04:0,12,220	1/1:0,6:6:15.41:74,15,0	1/1:0,7:7:20.26:110,20,0	1/1:0,9:9:25.70:132,26,0	1/1:0,2:2:5.78:31,6,0
chr10	81097157	.	TATTTA	T	2570.23	PASS	AB=0.750;AC=32;AF=0.640;AN=50;BaseQRankSum=11.298;DP=179;FS=3.841;HRun=0;HaplotypeScore=163.0932;InbreedingCoeff=0.7139;MQ=86.66;MQ0=3;MQRankSum=-10.055;QD=27.34;ReadPosRankSum=8.111;VQSLOD=2.7326;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:6.02:75,6,0	1/1:0,2:2:6.02:72,6,0	0/0:9,0:9:27.08:0,27,811	0/1:8,0:8:5.66:6,0,413	1/1:0,9:9:2.81:258,3,0	0/0:27,0:26:81.28:0,81,2605	0/0:9,0:9:27.09:0,27,897	./.	0/0:7,0:7:21.07:0,21,576	1/1:0,6:6:18.06:239,18,0	1/1:0,8:8:21.05:234,21,0	0/0:8,0:8:24.08:0,24,736	1/1:1,3:3:9.03:101,9,0	1/1:0,6:6:17.88:189,18,0	1/1:1,3:3:9.03:113,9,0	1/1:0,6:6:18:208,18,0	1/1:1,2:2:6.02:67,6,0	./.	1/1:0,3:3:9.03:119,9,0	0/1:0,6:6:19.09:154,0,19	./.	0/0:7,0:7:21.07:0,21,700	0/0:14,0:14:42.14:0,42,1390	0/0:4,0:4:12.04:0,12,351	1/1:2,6:7:18:207,18,0	1/1:0,7:7:21.07:276,21,0	1/1:1,9:10:30.08:364,30,0	1/1:0,2:2:6.02:78,6,0
chr10	81097167	.	AT	A	5231.04	PASS	AC=36;AF=0.667;AN=54;BaseQRankSum=10.592;DP=288;FS=0.000;HRun=1;HaplotypeScore=147.2633;InbreedingCoeff=0.9280;MQ=72.49;MQ0=6;MQRankSum=-9.657;QD=26.55;ReadPosRankSum=3.303;VQSLOD=4.7544;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:6:8.99:96,9,0	1/1:0,5:5:12.04:153,12,0	0/0:9,0:9:27.09:0,27,411	0/0:8,0:8:18.05:0,18,267	1/1:0,23:23:33.05:379,33,0	0/0:28,0:27:84.29:0,84,1333	0/0:9,0:9:27.07:0,27,408	1/1:0,25:23:69.17:919,69,0	0/0:5,0:5:15.05:0,15,240	1/1:0,15:14:42.13:545,42,0	1/1:0,12:12:24.03:266,24,0	0/0:8,0:8:24.08:0,24,382	1/1:0,8:7:14.97:147,15,0	1/1:0,7:7:17.88:186,18,0	1/1:0,9:8:12:132,12,0	1/1:0,10:10:26.99:308,27,0	1/1:1,8:7:17.99:191,18,0	./.	1/1:0,7:7:21.07:274,21,0	1/1:0,11:11:23.96:240,24,0	1/1:0,1:1:2.97:20,3,0	0/0:7,0:7:21.07:0,21,336	0/0:12,0:12:36.11:0,36,552	0/0:4,0:4:12:0,12,164	1/1:1,13:13:29.94:324,30,0	1/1:1,13:13:39.12:497,39,0	1/1:1,15:16:41.98:458,42,0	1/1:0,5:5:8.99:95,9,0
chr10	81098275	.	C	CACACACAT	11540.60	PASS	AB=0.641;AC=49;AF=0.875;AN=56;BaseQRankSum=3.745;DP=683;FS=31.666;HRun=0;HaplotypeScore=140.2585;InbreedingCoeff=0.6027;MQ=60.93;MQ0=8;MQRankSum=-3.228;QD=18.77;ReadPosRankSum=2.798;VQSLOD=2.7965;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:25:11.80:74,0,12	1/1:0,8:12:6.02:210,6,0	0/0:29,0:20:54.07:0,54,558	0/0:26,0:16:32.15:0,32,341	1/1:0,14:27:12.04:425,12,0	1/1:1,17:27:3.01:134,3,0	0/0:13,0:13:35.97:0,36,598	1/1:36,0:35:90.95:1107,91,0	1/1:1,15:24:23.56:840,24,0	1/1:6,0:32:74.95:878,75,0	1/1:3,0:22:6.02:103,6,0	1/1:3,21:32:15.22:600,15,0	1/1:0,0:24:9.03:307,9,0	1/1:0,2:24:21.07:764,21,0	1/1:1,24:36:9.03:402,9,0	1/1:1,17:30:21.02:825,21,0	1/1:22,0:21:45.85:756,46,0	1/1:13,0:13:35.61:432,36,0	1/1:14,0:14:41.89:377,42,0	1/1:3,12:24:18.06:515,18,0	1/1:14,0:13:20.97:210,21,0	1/1:2,20:30:6.02:268,6,0	1/1:1,9:21:3.01:134,3,0	1/1:4,14:27:3.01:61,3,0	1/1:0,23:30:12.04:477,12,0	1/1:9,0:30:62.83:960,63,0	1/1:1,18:28:13.74:529,14,0	1/1:8,0:8:20.81:153,21,0
chr10	81098461	.	C	CATCTATCT	4971.89	PASS	AB=0.894;AC=27;AF=0.540;AN=50;BaseQRankSum=-2.357;DP=571;FS=0.000;HRun=0;HaplotypeScore=192.3848;InbreedingCoeff=0.6171;MQ=64.61;MQ0=7;MQRankSum=-3.902;QD=15.83;ReadPosRankSum=-1.133;VQSLOD=3.7225;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:0.07:0,0,392	1/1:7,0:13:3.01:104,3,0	./.	./.	0/1:14,0:14:0:0,0,0	0/0:8,0:14:15.05:0,15,279	0/0:12,0:18:12.03:0,12,190	./.	0/0:14,0:14:6.02:0,6,146	1/1:26,0:27:30.08:620,30,0	1/1:23,0:23:5.61:105,6,0	0/0:28,0:28:42.08:0,42,931	0/0:22,0:22:5.77:0,6,582	0/0:22,0:22:27.08:0,27,575	1/1:8,12:21:21.07:815,21,0	1/1:17,5:24:9.03:362,9,0	0/1:14,0:16:38.14:87,0,38	0/1:14,0:19:3.90:138,0,4	1/1:18,0:17:13.81:267,14,0	1/1:19,0:20:3.01:72,3,0	1/1:17,0:18:6.02:158,6,0	0/0:6,0:12:15.05:0,15,279	0/0:10,0:15:11.72:0,12,176	0/0:9,0:14:12.04:0,12,222	1/1:19,7:28:6.02:238,6,0	1/1:28,0:31:54.17:1280,54,0	1/1:13,5:22:8.95:362,9,0	1/1:19,0:20:21.03:362,21,0
chr10	81098518	.	A	ATC	779.35	PASS	AB=0.933;AC=12;AF=0.214;AN=56;BaseQRankSum=7.281;DP=526;FS=6.468;HRun=0;HaplotypeScore=120.2342;InbreedingCoeff=-0.2772;MQ=55.10;MQ0=3;MQRankSum=-4.926;QD=3.27;ReadPosRankSum=-3.962;VQSLOD=0.6850;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:28:44.97:0,45,670	0/1:5,0:5:7.22:7,0,81	0/0:17,0:12:29.83:0,30,411	0/0:8,0:3:9.03:0,9,128	0/0:26,0:26:34:0,34,503	0/0:13,0:13:36.09:0,36,461	0/0:15,0:15:10.66:0,11,359	0/0:33,0:30:87.29:0,87,1311	0/0:9,0:9:27.09:0,27,411	0/1:18,3:21:80.30:80,0,598	0/1:23,4:27:10.48:10,0,598	0/0:20,0:20:57.13:0,57,838	0/0:23,0:23:54.68:0,55,992	0/0:22,0:22:60.19:0,60,891	0/1:18,0:18:99:127,0,235	0/1:17,0:17:27.76:28,0,266	0/1:18,1:20:23.35:23,0,293	0/0:24,0:24:6.38:0,6,536	0/1:14,1:13:62.45:62,0,350	0/0:11,2:13:26.30:0,26,369	0/1:8,4:12:36.55:37,0,168	0/0:11,0:11:27.06:0,27,324	0/0:13,0:13:29.29:0,29,363	0/0:11,0:13:18.07:0,18,372	0/1:20,1:21:47.98:48,0,357	0/1:30,2:32:99:345,0,681	0/1:26,0:25:33.75:34,0,661	0/1:23,1:24:99:127,0,626
chr10	81098732	.	T	TA	1620.15	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-9.797;DP=368;FS=17.318;HRun=8;HaplotypeScore=34.4899;InbreedingCoeff=0.9319;MQ=70.28;MQ0=1;MQRankSum=2.669;QD=27.00;ReadPosRankSum=3.860;VQSLOD=2.0646;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:36.01:0,36,329	0/0:6,0:6:15.01:0,15,137	0/0:9,0:9:14.97:0,15,128	0/0:1,0:1:3:0,3,27	0/0:10,0:10:24.01:0,24,220	1/1:0,20:20:54.16:623,54,0	0/0:8,0:8:24.01:0,24,220	0/0:34,0:34:68.98:0,69,618	1/1:1,11:12:30.09:346,30,0	0/0:12,0:12:33.02:0,33,302	0/0:15,0:15:39.02:0,39,357	1/1:2,9:11:27.08:312,27,0	0/0:19,0:19:46.98:0,47,402	0/0:12,0:12:33.02:0,33,302	0/0:11,0:11:30.02:0,30,275	0/0:8,0:8:24.01:0,24,220	0/0:20,0:19:47.88:0,48,414	0/0:14,0:14:30.01:0,30,275	0/0:8,0:8:24.01:0,24,220	0/0:19,0:19:57.03:0,57,521	0/0:9,0:9:21.01:0,21,192	1/1:0,3:3:9.03:104,9,0	1/1:0,10:10:27.08:312,27,0	1/1:1,3:4:9.03:104,9,0	0/0:17,0:17:48.03:0,48,439	0/0:22,0:22:60.02:0,60,549	0/0:26,0:26:72.04:0,72,659	0/0:13,0:13:39.02:0,39,357
chr10	81099062	.	A	AT	2260.48	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-9.360;DP=413;FS=2.329;HRun=6;HaplotypeScore=39.1712;InbreedingCoeff=0.9560;MQ=73.74;MQ0=0;MQRankSum=2.415;QD=31.40;ReadPosRankSum=3.298;VQSLOD=3.7717;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:54.59:0,55,551	0/0:7,0:7:21.05:0,21,214	0/0:11,0:11:16.85:0,17,227	0/0:5,0:5:6.01:0,6,61	0/0:26,0:26:72.14:0,72,727	1/1:0,14:15:39.12:490,39,0	0/0:8,0:8:24.04:0,24,238	0/0:31,0:31:75.14:0,75,755	1/1:2,14:16:45.14:559,45,0	0/0:17,0:17:42.09:0,42,428	0/0:19,0:19:54.11:0,54,544	1/1:0,13:13:36.12:453,36,0	0/0:21,0:21:63.13:0,63,635	0/0:11,0:11:27.06:0,27,275	0/0:16,0:16:45.10:0,45,459	0/0:8,0:8:21.05:0,21,214	0/0:15,0:15:42.08:0,42,421	0/0:8,0:8:22.27:0,22,210	0/0:19,0:19:48.09:0,48,483	0/0:18,0:18:51.10:0,51,512	0/0:4,0:4:9.02:0,9,92	1/1:1,4:5:12.04:151,12,0	1/1:0,10:10:27.09:340,27,0	1/1:0,13:13:36.12:453,36,0	0/0:18,0:18:54.12:0,54,551	0/0:19,0:19:51.12:0,51,520	0/0:27,0:27:72.11:0,72,713	0/0:10,0:10:30.07:0,30,306
chr10	81099359	.	CT	C	1949.37	PASS	AB=0.931;AC=15;AF=0.268;AN=56;BaseQRankSum=8.794;DP=515;FS=1.403;HRun=10;HaplotypeScore=55.3784;InbreedingCoeff=0.7619;MQ=65.98;MQ0=4;MQRankSum=1.997;QD=12.18;ReadPosRankSum=-0.615;VQSLOD=2.9008;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.12:0,63,669	0/0:7,0:7:21.05:0,21,225	0/0:21,0:18:21.87:0,22,186	0/0:15,0:12:17.06:0,17,194	0/0:33,0:32:81.19:0,81,878	1/1:2,16:18:44.99:391,45,0	0/1:13,0:13:1.69:2,0,208	0/0:24,0:24:54.13:0,54,588	1/1:5,19:24:50.97:443,51,0	0/0:27,0:27:75.19:0,75,818	0/0:20,0:20:36.69:0,37,467	1/1:1,12:13:29.98:260,30,0	0/0:14,0:14:30.08:0,30,332	0/0:16,0:16:42.10:0,42,454	0/0:20,0:20:42.11:0,42,465	0/0:15,0:15:39.11:0,39,431	0/0:26,0:26:66.18:0,66,728	0/1:18,2:19:0.97:1,0,446	0/0:14,0:13:30.04:0,30,312	0/0:25,3:28:5.70:0,6,646	0/0:5,0:5:15.04:0,15,166	1/1:1,14:15:35.90:298,36,0	1/1:0,21:21:56.99:495,57,0	1/1:2,11:13:26.98:234,27,0	0/0:18,0:18:48.13:0,48,531	0/0:24,0:24:60.16:0,60,657	0/1:20,3:23:11.32:11,0,507	0/0:4,0:4:6.02:0,6,66
chr10	81099787	.	AC	A	10671.38	PASS	AB=0.533;AC=31;AF=0.554;AN=56;BaseQRankSum=9.356;DP=392;FS=0.000;HRun=1;HaplotypeScore=39.4216;InbreedingCoeff=0.9081;MQ=65.78;MQ0=0;MQRankSum=-1.862;QD=40.58;ReadPosRankSum=0.325;VQSLOD=4.7644;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:45.14:0,45,696	1/1:0,12:12:33.11:459,33,0	0/0:4,0:4:9.92:0,10,141	0/0:4,0:4:9.01:0,9,111	1/1:0,30:30:90.30:1252,90,0	0/0:10,0:10:30.10:0,30,480	0/0:7,0:7:18.06:0,18,284	1/1:0,29:29:87.28:1200,87,0	0/0:20,0:20:60.20:0,60,956	1/1:1,13:14:42.14:580,42,0	1/1:0,15:15:42.14:587,42,0	0/0:8,0:8:21.07:0,21,336	0/0:21,0:21:63.20:0,63,977	0/0:12,0:12:36.10:0,36,549	1/1:0,11:11:30.10:420,30,0	0/1:1,7:8:23.89:270,0,24	1/1:0,18:18:54.18:755,54,0	1/1:1,9:10:30.10:408,30,0	1/1:0,14:14:42.14:588,42,0	1/1:0,25:25:75.25:1049,75,0	1/1:0,6:6:18.06:252,18,0	0/0:7,0:7:21.06:0,21,300	0/0:13,0:13:39.13:0,39,623	0/0:8,0:8:24.08:0,24,382	1/1:0,23:23:63.21:881,63,0	1/1:0,24:24:72.24:1005,72,0	1/1:0,17:17:51.17:713,51,0	1/1:0,7:7:18.06:252,18,0
chr10	81099924	.	A	AT	2292.74	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.078;DP=524;FS=6.052;HRun=8;HaplotypeScore=49.8234;InbreedingCoeff=0.9635;MQ=80.26;MQ0=1;MQRankSum=0.154;QD=26.35;ReadPosRankSum=1.172;VQSLOD=4.3811;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.03:0,72,659	0/0:14,0:14:36.02:0,36,329	0/0:14,0:15:19.69:0,20,259	0/0:13,0:14:23.13:0,23,197	0/0:32,0:32:96.04:0,96,874	1/1:1,19:20:48.14:554,48,0	0/0:6,0:6:15:0,15,137	0/0:30,0:29:78.04:0,78,714	1/1:2,9:11:27.08:311,27,0	0/0:23,0:23:63.03:0,63,577	0/0:38,0:38:99:0,105,957	1/1:2,13:15:39.12:450,39,0	0/0:27,0:28:74.07:0,74,664	0/0:16,0:16:47.98:0,48,427	0/0:13,0:13:36.01:0,36,330	0/0:14,1:15:4.40:0,4,295	0/0:20,0:20:54.03:0,54,494	0/0:17,0:16:36.01:0,36,329	0/0:18,0:18:42.02:0,42,384	0/0:26,0:26:65.98:0,66,596	0/0:13,0:13:39.02:0,39,357	1/1:2,10:12:24.50:263,25,0	1/1:3,21:24:63.19:727,63,0	1/1:0,5:5:15.04:173,15,0	0/0:20,0:20:54.01:0,54,488	0/0:17,0:18:50.05:0,50,442	0/0:20,0:20:54.02:0,54,494	0/0:13,0:13:33:0,33,302
chr10	81100414	.	GTA	G	2311.79	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.919;DP=578;FS=0.900;HRun=0;HaplotypeScore=168.7772;InbreedingCoeff=0.9978;MQ=80.48;MQ0=1;MQRankSum=-12.200;QD=19.26;ReadPosRankSum=0.342;VQSLOD=3.5873;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.31:0,90,1648	0/0:13,0:13:36.12:0,36,654	0/0:25,0:25:51.58:0,52,1108	0/0:20,0:20:57.19:0,57,1005	0/0:28,0:28:84.29:0,84,1539	1/1:5,22:26:69:683,69,0	0/0:16,0:16:45.15:0,45,812	0/0:40,0:35:96.32:0,96,1729	1/1:4,11:14:33.08:351,33,0	0/0:22,0:22:63.22:0,63,1149	0/0:16,0:16:48.16:0,48,879	1/1:1,19:19:56.85:537,57,0	0/0:22,0:22:63.22:0,63,1135	0/0:14,0:14:42.14:0,42,765	0/0:18,0:18:48.16:0,48,867	0/0:18,0:18:48.16:0,48,873	0/0:17,0:17:39.13:0,39,714	0/0:8,0:8:24.08:0,24,439	0/0:19,0:19:57.20:0,57,1026	0/0:26,0:26:69.24:0,69,1257	0/0:20,0:20:54.19:0,54,986	1/1:10,13:22:32.86:295,33,0	1/1:5,18:23:42.08:422,42,0	1/1:2,10:12:21.04:213,21,0	0/0:19,0:19:57.20:0,57,1037	0/0:24,0:24:72.25:0,72,1319	0/0:31,0:31:69.24:0,69,1257	0/0:9,0:9:21.07:0,21,385
chr10	81100420	.	GGTT	G	3071.62	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.156;DP=557;FS=0.914;HRun=0;HaplotypeScore=180.9851;InbreedingCoeff=0.9977;MQ=77.38;MQ0=1;MQRankSum=-13.416;QD=30.11;ReadPosRankSum=1.780;VQSLOD=3.7245;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.28:0,87,1994	0/0:13,0:13:39.05:0,39,822	0/0:19,0:19:54.16:0,54,1169	0/0:20,0:20:57.14:0,57,1186	0/0:30,0:30:90.30:0,90,2081	1/1:0,22:21:63.21:863,63,0	0/0:17,0:17:51.18:0,51,1206	0/0:38,0:35:99:0,105,2438	1/1:1,11:11:33.11:454,33,0	0/0:24,0:24:72.21:0,72,1623	0/0:18,0:18:54.17:0,54,1230	1/1:1,19:19:56.76:724,57,0	0/0:20,0:20:60.21:0,60,1398	0/0:14,0:14:39.13:0,39,921	0/0:16,0:16:42.14:0,42,974	0/0:19,0:19:51.18:0,51,1205	0/0:18,0:18:42.14:0,42,992	0/0:10,0:10:23.98:0,24,567	0/0:23,0:23:66.19:0,66,1491	0/0:25,0:25:72.18:0,72,1616	0/0:19,0:19:54.14:0,54,1197	1/1:5,13:17:30.10:406,30,0	1/1:1,18:19:40.95:530,41,0	1/1:1,10:11:21.07:281,21,0	0/0:18,0:18:54.19:0,54,1277	0/0:25,0:25:75.26:0,75,1772	0/0:29,0:29:87.21:0,87,1894	0/0:8,0:8:21.07:0,21,497
chr10	81100913	.	C	CA	1354.70	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=0.814;DP=463;FS=1.976;HRun=8;HaplotypeScore=80.2048;InbreedingCoeff=0.7372;MQ=64.10;MQ0=4;MQRankSum=-0.465;QD=23.36;ReadPosRankSum=1.279;VQSLOD=4.3738;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:60.18:692,60,0	0/0:15,0:14:36.02:0,36,329	0/1:6,0:4:12.80:13,0,26	0/0:7,0:3:1.52:0,2,19	0/0:27,0:27:63.03:0,63,576	0/0:17,0:17:48.02:0,48,439	0/0:9,0:9:24.01:0,24,220	0/0:30,0:27:43.43:0,43,502	0/0:15,0:15:45.02:0,45,412	0/0:17,0:16:45.01:0,45,404	0/0:24,0:24:56.98:0,57,511	0/0:19,0:19:45.01:0,45,412	1/1:3,9:12:27.08:312,27,0	1/1:3,14:17:42.12:485,42,0	0/0:16,0:16:42.02:0,42,384	0/0:16,0:16:45.02:0,45,412	0/0:31,0:31:87.05:0,87,796	0/0:14,0:14:36.02:0,36,329	0/0:18,0:16:45.02:0,45,412	0/0:18,0:17:41.98:0,42,375	0/0:11,0:11:29.91:0,30,274	0/0:6,0:6:12:0,12,110	0/0:15,0:15:39.02:0,39,357	0/0:16,0:16:42.02:0,42,384	0/0:18,0:18:45.01:0,45,412	0/0:15,0:15:42.02:0,42,384	0/0:30,0:30:78.02:0,78,709	0/0:1,0:1:3:0,3,27
chr10	81101492	.	CAATA	C	3819.47	PASS	AB=0.960;AC=36;AF=0.643;AN=56;BaseQRankSum=-3.927;DP=384;FS=11.962;HRun=0;HaplotypeScore=170.4821;InbreedingCoeff=-0.0430;MQ=46.38;MQ0=0;MQRankSum=0.460;QD=10.76;ReadPosRankSum=7.745;VQSLOD=1.5421;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,1:11:14.83:123,15,0	0/1:5,1:6:1.13:54,0,1	0/0:11,0:9:11.64:0,12,152	0/0:3,0:3:2.97:0,3,20	1/1:19,1:20:23.30:257,23,0	0/1:17,0:17:99:150,0,105	0/0:11,0:11:28.18:0,28,340	1/1:27,0:26:50.24:408,50,0	1/1:19,0:19:12.68:307,13,0	0/1:29,1:30:44.03:331,0,44	0/1:22,1:23:41.51:172,0,42	0/1:7,0:7:4.04:131,0,4	1/1:10,2:12:30.49:256,30,0	1/1:5,2:7:12.38:139,12,0	0/1:11,2:13:6:130,0,6	0/1:10,0:10:12.11:112,0,12	1/1:22,0:22:2.75:177,3,0	0/0:4,0:4:2.60:0,3,10	1/1:14,1:15:14.17:158,14,0	1/1:12,1:13:1.90:147,2,0	1/1:3,0:3:2.94:18,3,0	1/1:6,0:6:6.01:57,6,0	0/1:16,0:16:51.77:91,0,52	0/1:9,0:9:23.07:24,0,23	0/1:16,2:18:34.27:201,0,34	0/1:26,1:27:11.91:249,0,12	0/1:22,0:22:68.30:79,0,68	1/1:2,0:2:5.98:46,6,0
chr10	81101507	.	TAAAG	T	2028.44	PASS	AB=1.000;AC=27;AF=0.519;AN=52;BaseQRankSum=-7.770;DP=381;FS=1.676;HRun=0;HaplotypeScore=203.3476;InbreedingCoeff=0.1618;MQ=40.70;MQ0=5;MQRankSum=1.219;QD=7.51;ReadPosRankSum=5.832;VQSLOD=2.5622;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:13.89:120,14,0	0/1:4,0:4:2.24:2,0,25	./.	./.	0/0:16,0:16:8.27:0,8,57	1/1:13,1:14:27.06:377,27,0	0/0:10,0:10:10.27:0,10,132	0/1:27,0:22:9.91:10,0,45	1/1:17,3:20:56.91:712,57,0	0/1:28,0:28:8.89:9,0,332	0/0:20,0:20:30.51:0,31,241	1/1:10,1:11:10.78:313,11,0	0/1:15,0:15:51.22:51,0,58	0/1:14,0:14:28.01:28,0,117	0/1:11,0:11:13.14:13,0,146	0/1:9,0:9:5.75:6,0,79	0/1:18,0:18:11.12:11,0,95	0/0:4,0:4:5.96:0,6,48	0/1:15,0:15:11.59:12,0,107	0/0:12,0:12:4.07:0,4,89	1/1:5,0:5:2.74:12,3,0	1/1:3,0:3:8.62:102,9,0	1/1:9,3:12:24.03:288,24,0	1/1:9,1:10:14.75:122,15,0	0/1:18,0:18:2.41:2,0,212	0/1:24,0:24:7.99:8,0,277	0/0:27,0:27:62.56:0,63,504	0/0:6,0:6:11.83:0,12,76
chr10	81101513	.	A	AG	86.08	PASS	AB=0.894;AC=8;AF=0.143;AN=56;BaseQRankSum=7.841;DP=416;FS=1.918;HRun=0;HaplotypeScore=214.7307;InbreedingCoeff=0.1034;MQ=38.03;MQ0=6;MQRankSum=-4.809;QD=0.71;ReadPosRankSum=-3.869;VQSLOD=2.1658;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:20.87:0,21,224	0/0:5,0:5:12.02:0,12,136	0/0:13,0:5:14.54:0,15,174	0/0:2,0:1:3.01:0,3,42	0/0:25,0:25:39.32:0,39,434	0/0:15,0:15:36.45:0,36,335	0/0:9,0:9:24.07:0,24,318	0/0:34,0:25:57.61:0,58,615	0/0:20,0:20:58.97:0,59,518	0/1:28,2:30:15.74:16,0,552	0/1:19,3:22:1.34:1,0,437	0/0:11,0:11:30.67:0,31,281	0/0:15,0:15:44.62:0,45,523	0/0:16,0:16:44.70:0,45,446	0/1:10,2:12:26.10:26,0,95	0/1:8,2:10:12.85:13,0,226	0/0:15,1:16:22.75:0,23,403	0/1:5,1:6:5.15:5,0,58	0/0:14,1:15:12.30:0,12,289	0/0:12,0:12:14.84:0,15,317	0/0:5,0:5:11.93:0,12,144	0/0:3,0:3:6.32:0,6,35	0/0:13,0:13:32.68:0,33,352	0/0:11,0:11:17.92:0,18,205	0/0:20,0:20:10.29:0,10,328	0/0:22,1:23:6.80:0,7,482	0/1:33,0:33:51.13:51,0,432	1/1:5,4:9:17.05:103,17,0
chr10	81101517	.	A	AG	683.16	PASS	AB=0.921;AC=15;AF=0.268;AN=56;BaseQRankSum=11.877;DP=413;FS=0.000;HRun=0;HaplotypeScore=211.3701;InbreedingCoeff=-0.0822;MQ=36.49;MQ0=8;MQRankSum=-5.894;QD=3.28;ReadPosRankSum=5.088;VQSLOD=2.7858;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:13.89:0,14,200	0/1:4,0:4:2.88:3,0,30	0/0:14,0:4:11.25:0,11,133	0/0:3,0:2:3.01:0,3,42	0/0:24,0:24:20.65:0,21,274	0/0:13,0:13:28.25:0,28,212	0/0:7,0:7:21.07:0,21,291	0/0:38,0:27:54.82:0,55,553	0/0:20,0:20:59.10:0,59,542	0/1:27,0:30:99:127,0,195	0/1:19,0:19:22.19:73,0,22	0/0:10,0:10:29.75:0,30,252	0/0:16,0:16:23.91:0,24,350	0/0:16,0:16:32.48:0,32,418	1/1:12,0:12:2.09:63,2,0	0/1:11,0:11:24.13:24,0,87	0/1:17,0:17:22.50:22,0,153	0/1:6,0:6:12.29:12,0,99	0/1:12,3:15:60.34:60,0,157	0/1:10,2:12:22.91:23,0,63	0/0:5,0:5:8.99:0,9,109	0/0:3,0:3:8.82:0,9,55	0/0:13,0:13:29.67:0,30,310	0/0:12,0:12:17.92:0,18,215	0/1:13,1:16:20.43:93,0,20	0/1:22,0:24:74.04:74,0,126	0/1:23,9:33:56.40:184,0,56	1/1:9,0:9:8.55:79,9,0
chr10	81101519	.	GAA	G	3129.53	PASS	AB=0.952;AC=24;AF=0.429;AN=56;BaseQRankSum=7.456;DP=426;FS=3.069;HRun=3;HaplotypeScore=210.9349;InbreedingCoeff=-0.4190;MQ=36.53;MQ0=8;MQRankSum=-3.807;QD=8.48;ReadPosRankSum=9.362;VQSLOD=-0.4486;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:29.16:29,0,83	0/1:4,0:4:33.36:42,0,33	0/0:17,0:4:9.48:0,9,95	0/0:5,0:2:5.98:0,6,59	0/1:23,1:24:99:111,0,369	0/1:13,0:13:4.20:4,0,59	0/0:6,0:6:18.06:0,18,305	0/1:41,0:30:31.18:31,0,368	0/1:21,0:21:6.85:7,0,135	0/1:25,6:31:92.79:403,0,93	0/1:16,2:18:12.03:263,0,12	0/1:10,0:10:4.21:4,0,99	0/1:16,1:17:97.23:97,0,315	0/1:16,0:16:63.18:63,0,398	0/1:14,0:14:99:125,0,108	0/1:8,3:11:35.03:185,0,35	0/1:16,1:17:99:130,0,177	0/1:6,0:6:21.59:22,0,119	0/1:14,1:15:63.93:250,0,64	1/1:10,2:12:23.19:252,23,0	0/0:5,0:5:9.85:0,10,97	0/1:3,0:3:0.56:1,0,26	0/0:12,0:12:8.54:0,9,98	0/0:12,0:12:11.31:0,11,135	0/1:16,1:17:66.44:204,0,66	0/1:18,7:25:23.85:409,0,24	1/1:33,1:34:76.09:620,76,0	0/1:9,0:9:38.46:38,0,43
chr10	81101520	.	A	AG	1694.63	PASS	AB=0.844;AC=19;AF=0.339;AN=56;BaseQRankSum=10.752;DP=424;FS=1.294;HRun=1;HaplotypeScore=210.7221;InbreedingCoeff=-0.0723;MQ=36.58;MQ0=8;MQRankSum=-6.170;QD=6.30;ReadPosRankSum=7.669;VQSLOD=0.4011;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,1:11:16.17:0,16,201	0/1:3,1:4:31.64:32,0,32	0/0:16,0:4:9.48:0,9,95	0/0:4,1:2:2.99:0,3,24	0/1:19,5:24:48.91:49,0,357	0/0:13,0:13:30.82:0,31,234	0/0:7,0:7:18.06:0,18,252	0/0:39,1:29:37.66:0,38,522	0/0:21,0:21:59.10:0,59,527	0/1:23,8:31:99:278,0,169	1/1:11,7:18:19.92:186,20,0	0/0:10,0:10:29.68:0,30,256	0/1:16,2:18:16.26:16,0,281	0/1:14,2:16:2.30:2,0,325	0/1:10,4:14:74.65:86,0,75	0/1:9,1:10:44.91:45,0,58	0/1:13,4:17:85.14:85,0,136	0/1:5,1:6:16.25:16,0,102	0/1:12,3:15:79.58:126,0,80	1/1:9,3:12:23.24:139,23,0	0/0:5,0:5:5.58:0,6,92	0/0:3,0:3:8.86:0,9,70	0/0:12,0:12:26.67:0,27,285	0/0:12,0:12:17.92:0,18,216	0/1:12,5:17:60.05:142,0,60	0/1:19,6:25:85.09:215,0,85	1/1:20,13:33:4.53:422,5,0	0/1:9,0:9:8.28:26,0,8
chr10	81101521	.	A	AG	1425.30	PASS	AB=0.833;AC=17;AF=0.304;AN=56;BaseQRankSum=11.873;DP=424;FS=0.825;HRun=0;HaplotypeScore=211.4618;InbreedingCoeff=-0.2587;MQ=36.40;MQ0=9;MQRankSum=-7.068;QD=5.28;ReadPosRankSum=9.029;VQSLOD=2.6527;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,1:11:13.56:0,14,200	0/1:3,1:4:31.63:32,0,32	0/0:14,0:2:6:0,6,62	0/0:5,0:2:5.95:0,6,42	0/1:21,3:26:26.20:26,0,365	0/0:13,0:13:32.92:0,33,254	0/0:7,0:7:21.05:0,21,276	0/0:39,1:29:37.87:0,38,526	0/0:21,0:21:59.10:0,59,527	0/1:22,7:30:99:252,0,170	0/1:11,4:18:30.18:125,0,30	0/0:10,0:10:29.70:0,30,258	0/1:16,2:18:13.24:13,0,307	0/1:14,2:16:1.53:2,0,329	0/1:10,2:14:74.06:74,0,114	0/1:9,1:10:38.28:38,0,62	0/1:12,2:16:57.08:57,0,144	0/1:5,1:6:14.04:14,0,115	0/1:12,3:15:94.98:123,0,95	0/1:9,2:12:1.17:88,0,1	0/0:5,0:5:5.74:0,6,83	0/0:3,0:3:8.86:0,9,72	0/0:12,0:12:26.67:0,27,285	0/0:12,0:12:17.92:0,18,216	0/1:12,2:17:86.81:135,0,87	0/1:19,3:25:68.02:210,0,68	1/1:21,13:34:3.88:379,4,0	0/1:9,0:9:10.98:11,0,44
chr10	81101531	.	GAA	G	1461.97	PASS	AB=0.905;AC=18;AF=0.333;AN=54;BaseQRankSum=-2.533;DP=427;FS=0.000;HRun=3;HaplotypeScore=217.1453;InbreedingCoeff=-0.1026;MQ=36.22;MQ0=12;MQRankSum=-1.380;QD=6.22;ReadPosRankSum=1.619;VQSLOD=-0.0847;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:93.39:202,0,93	0/1:4,0:4:1.36:1,0,83	./.	0/0:7,0:1:3.01:0,3,38	0/0:25,0:25:40.06:0,40,599	0/1:10,4:14:18.98:151,0,19	0/0:7,0:7:18.88:0,19,202	0/1:26,10:22:99:249,0,358	1/1:16,5:21:42.36:314,42,0	0/0:28,0:28:14.57:0,15,679	0/0:16,0:16:16.20:0,16,349	0/1:10,1:11:5.06:51,0,5	0/1:19,0:19:99:120,0,410	0/1:15,0:15:99:132,0,373	0/1:14,0:14:6.34:6,0,403	0/0:9,0:9:6.21:0,6,223	0/1:13,1:14:66.59:67,0,208	0/0:7,0:7:17.81:0,18,214	0/1:15,1:15:49.76:50,0,265	0/0:9,0:9:7.21:0,7,188	0/1:3,2:5:34.13:76,0,34	0/1:1,2:3:0.56:45,0,1	1/1:12,0:12:14.45:99,14,0	0/1:11,0:11:21.01:21,0,32	0/0:19,0:19:10.46:0,10,532	0/1:29,0:29:38.09:38,0,621	0/0:35,0:35:94.95:0,95,1067	0/0:10,0:10:29.81:0,30,362
chr10	81101539	.	GAGAGAAAGAA	G	2016.57	PASS	AB=0.983;AC=11;AF=0.196;AN=56;BaseQRankSum=-7.695;DP=432;FS=3.500;HRun=0;HaplotypeScore=274.9982;InbreedingCoeff=0.4316;MQ=37.33;MQ0=11;MQRankSum=-2.664;QD=23.18;ReadPosRankSum=1.052;VQSLOD=2.8012;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:10:46.95:67,0,47	0/0:4,0:4:8.23:0,8,135	0/0:20,0:2:6.02:0,6,103	0/0:13,0:1:3.01:0,3,102	0/0:26,0:26:67.79:0,68,716	1/1:14,4:18:27.52:489,28,0	0/0:6,0:6:12.51:0,13,338	0/0:39,0:25:34.80:0,35,609	1/1:15,5:20:37.03:798,37,0	0/0:27,0:27:79.25:0,79,1566	0/0:15,0:15:41.85:0,42,861	0/1:10,1:11:20.78:334,0,21	0/0:19,0:19:41.95:0,42,705	0/0:15,0:15:18.96:0,19,788	0/0:15,0:15:40.54:0,41,675	0/0:10,0:10:29.88:0,30,493	0/0:14,0:14:37.07:0,37,503	0/0:7,0:8:8.83:0,9,313	0/0:14,0:13:12.27:0,12,524	0/0:10,0:10:27.11:0,27,491	0/1:5,0:5:1.67:2,0,98	1/1:1,2:3:9.03:203,9,0	0/1:10,0:10:2.74:141,0,3	0/1:10,0:10:49.33:140,0,49	0/0:18,0:18:52.03:0,52,939	0/0:30,0:30:66.72:0,67,1539	0/0:32,0:32:92.25:0,92,1909	0/0:10,0:10:15.63:0,16,413
chr10	81101541	.	GAGAAAGAA	G	2322.45	PASS	AB=0.867;AC=12;AF=0.214;AN=56;BaseQRankSum=-6.599;DP=439;FS=5.022;HRun=0;HaplotypeScore=263.7235;InbreedingCoeff=0.6700;MQ=39.20;MQ0=11;MQRankSum=0.557;QD=27.01;ReadPosRankSum=0.309;VQSLOD=2.6345;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:2.98:0,3,20	0/0:4,0:4:3.01:0,3,60	0/0:22,0:4:12.04:0,12,173	0/1:16,0:4:0.79:1,0,58	0/0:26,0:26:11.65:0,12,256	1/1:8,9:17:27.07:606,27,0	0/0:5,0:5:7.73:0,8,267	0/0:40,0:26:39.92:0,40,474	1/1:12,6:18:36.12:851,36,0	0/0:29,0:29:62.19:0,62,969	0/0:15,0:15:25.52:0,26,549	0/1:7,4:11:11.90:450,0,12	0/0:19,0:19:34.75:0,35,424	0/0:15,0:15:41.45:0,41,546	0/0:15,0:15:19.24:0,19,363	0/0:10,0:10:17.23:0,17,255	0/0:14,0:14:23.51:0,24,290	0/0:8,0:8:4:0,4,160	0/0:14,0:13:19.39:0,19,268	0/0:10,0:10:17.11:0,17,258	0/0:5,0:5:8.90:0,9,68	1/1:2,2:4:9.03:227,9,0	1/1:5,4:9:8.62:143,9,0	1/1:5,6:11:9.03:209,9,0	0/0:19,0:19:29.49:0,29,555	0/0:30,0:30:52.54:0,53,846	0/0:33,0:33:46.86:0,47,1065	0/0:10,0:10:23.32:0,23,267
chr10	81101552	.	AAAG	A	1587.08	PASS	AB=0.958;AC=12;AF=0.214;AN=56;BaseQRankSum=-5.114;DP=484;FS=8.772;HRun=0;HaplotypeScore=241.4791;InbreedingCoeff=0.3431;MQ=43.50;MQ0=13;MQRankSum=-2.148;QD=15.12;ReadPosRankSum=3.967;VQSLOD=2.0628;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:1.18:141,0,1	0/0:4,0:4:9.02:0,9,119	0/0:25,0:8:6.10:0,6,185	0/0:25,0:5:3.30:0,3,76	0/0:28,0:28:77.55:0,78,873	1/1:14,1:15:23.80:210,24,0	0/0:6,0:6:3.99:0,4,252	0/0:46,0:35:81.38:0,81,945	1/1:12,3:15:35.93:375,36,0	0/0:32,0:32:85.47:0,85,1276	0/0:18,0:18:50.60:0,51,710	0/1:7,1:8:26.67:189,0,27	0/1:18,1:19:99:400,0,135	0/1:16,0:16:99:157,0,220	0/0:15,0:15:39.54:0,40,517	0/0:13,0:13:30.08:0,30,453	0/0:14,0:14:36.96:0,37,459	0/0:8,0:8:19.30:0,19,269	0/0:18,0:16:42.59:0,43,583	0/0:13,0:13:33.06:0,33,415	0/0:5,0:5:8.61:0,9,89	0/1:4,0:4:14.96:51,0,15	1/1:4,3:7:8.77:143,9,0	0/1:9,1:10:21.06:85,0,21	0/0:21,0:21:57.15:0,57,842	0/0:32,0:32:86.82:0,87,1175	0/0:41,0:41:99:0,123,1686	0/0:13,0:13:35.75:0,36,384
chr10	81101555	.	G	GA	911	PASS	AB=0.850;AC=9;AF=0.161;AN=56;BaseQRankSum=-4.663;DP=485;FS=4.486;HRun=3;HaplotypeScore=223.6096;InbreedingCoeff=0.2533;MQ=46.87;MQ0=12;MQRankSum=0.158;QD=8.84;ReadPosRankSum=1.976;VQSLOD=1.0979;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,5:10:17.86:197,18,0	0/0:3,0:3:9.01:0,9,85	0/0:29,0:9:23.44:0,23,142	0/1:30,0:7:2.91:3,0,53	0/0:28,0:28:74.21:0,74,659	0/0:15,0:15:4.78:0,5,58	0/0:6,0:6:10.53:0,11,173	0/0:47,0:36:59.59:0,60,582	0/1:15,0:15:27.54:28,0,35	0/0:29,0:29:83.54:0,84,783	0/0:21,0:21:56.55:0,57,483	0/0:7,0:7:0.26:0,0,61	0/1:6,12:18:31.92:486,0,32	0/1:7,8:15:71.32:297,0,71	0/0:15,0:15:38.97:0,39,343	0/0:11,0:11:30.03:0,30,287	0/0:15,0:15:35.91:0,36,289	0/0:8,0:8:20.87:0,21,184	0/0:17,0:15:42.40:0,42,394	0/0:13,0:13:32.97:0,33,302	0/0:4,0:4:5.51:0,6,34	0/0:4,0:4:7.61:0,8,51	1/1:7,0:7:7.68:33,8,0	0/1:8,0:8:3.38:3,0,41	0/0:22,0:22:60.04:0,60,556	0/0:33,0:33:79.66:0,80,704	0/0:41,0:41:99:0,123,1150	0/0:13,0:13:7.87:0,8,241
chr10	81101559	.	GA	G	8860.19	PASS	AB=0.936;AC=35;AF=0.625;AN=56;BaseQRankSum=1.980;DP=492;FS=3.606;HRun=4;HaplotypeScore=191.5086;InbreedingCoeff=0.6845;MQ=50.50;MQ0=11;MQRankSum=-0.775;QD=23.26;ReadPosRankSum=1.106;VQSLOD=3.0824;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:3.20:0,3,187	1/1:1,2:3:7.84:77,8,0	0/0:31,0:10:22.25:0,22,175	0/1:33,0:9:14.25:14,0,62	1/1:3,25:28:80.42:918,80,0	0/0:17,0:17:16.76:0,17,111	0/0:6,0:6:17.93:0,18,223	1/1:17,25:34:57.94:695,58,0	0/0:16,0:16:15.13:0,15,97	1/1:1,27:28:84.22:941,84,0	1/1:4,16:20:52.89:564,53,0	0/0:7,0:7:7.27:0,7,38	0/1:17,1:18:13.59:14,0,460	0/1:14,2:16:49.68:50,0,328	1/1:3,11:14:38.99:423,39,0	1/1:0,13:13:30.09:353,30,0	1/1:2,13:15:30.08:316,30,0	1/1:1,7:8:12.44:203,12,0	1/1:2,14:15:42.12:484,42,0	1/1:0,13:13:36.09:407,36,0	1/1:0,5:5:11.25:111,11,0	0/0:5,0:5:9.41:0,9,91	0/0:9,0:9:14.48:0,14,119	0/0:10,0:10:5.64:0,6,66	1/1:3,19:22:58.94:638,59,0	1/1:7,23:30:77.84:843,78,0	1/1:2,40:42:99:1374,124,0	1/1:3,11:14:41.60:436,42,0
chr10	81101560	.	A	AAAG	11789.36	PASS	AB=0.945;AC=35;AF=0.625;AN=56;BaseQRankSum=0.976;DP=500;FS=5.459;HRun=0;HaplotypeScore=197.5301;InbreedingCoeff=0.6999;MQ=50.64;MQ0=10;MQRankSum=-0.180;QD=32.93;ReadPosRankSum=0.170;VQSLOD=4.7758;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:8:0.14:0,0,188	1/1:3,0:3:9.03:113,9,0	0/0:34,0:10:22.14:0,22,206	0/0:35,0:9:0.09:0,0,71	1/1:26,2:28:81.04:1103,81,0	0/0:17,0:17:30.06:0,30,324	0/0:6,0:6:18.05:0,18,254	1/1:41,0:35:26.74:812,27,0	0/0:16,0:16:38.80:0,39,370	1/1:27,0:28:84.27:1360,84,0	1/1:20,1:21:53.66:777,54,0	0/0:7,0:7:7.57:0,8,177	0/1:17,1:18:99:112,0,389	0/1:14,2:16:99:159,0,271	1/1:12,1:13:39.11:567,39,0	1/1:14,0:14:30.10:450,30,0	1/1:15,0:15:32.18:422,32,0	1/1:8,0:8:0.13:247,0,0	1/1:17,0:16:45.12:610,45,0	1/1:13,0:13:36.11:552,36,0	1/1:5,0:5:12.04:163,12,0	0/0:5,0:5:15.04:0,15,175	0/0:11,0:11:14.49:0,14,137	0/0:10,0:10:12.03:0,12,137	1/1:22,0:22:59.78:873,60,0	1/1:29,1:30:77.94:1133,78,0	1/1:43,0:43:99:1790,125,0	1/1:15,0:15:42.08:546,42,0
chr10	81102481	.	CAAATAAAT	C	699.16	PASS	AB=1.000;AC=8;AF=0.190;AN=42;BaseQRankSum=-1.163;DP=232;FS=1.154;HRun=0;HaplotypeScore=73.3734;InbreedingCoeff=0.3628;MQ=61.63;MQ0=1;MQRankSum=-4.991;QD=14.57;ReadPosRankSum=0.129;VQSLOD=2.1156;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:3.01:0,3,112	0/0:2,0:2:5.62:0,6,28	./.	./.	0/0:14,0:14:8.76:0,9,75	1/1:10,7:17:15.05:374,15,0	./.	0/0:25,0:24:9:0,9,120	1/1:1,1:2:3.01:75,3,0	0/1:7,0:7:44.29:63,0,44	0/0:4,0:4:2.88:0,3,15	1/1:2,4:6:12.04:293,12,0	0/0:9,0:9:12.01:0,12,317	0/0:4,0:4:6.02:0,6,226	0/0:7,0:7:14.01:0,14,68	0/0:3,0:3:3:0,3,25	0/0:22,0:22:34.02:0,34,191	0/1:16,0:16:21.27:21,0,280	0/0:22,0:22:19.53:0,20,115	0/0:7,0:7:5.64:0,6,28	0/0:8,0:8:3:0,3,25	./.	./.	./.	0/0:7,0:7:9.03:0,9,297	0/0:6,0:6:12.04:0,12,364	./.	0/0:11,0:11:30.10:0,30,1087
chr10	81102524	.	AT	A	362.63	PASS	AB=0.808;AC=11;AF=0.212;AN=52;BaseQRankSum=7.653;DP=235;FS=4.058;HRun=1;HaplotypeScore=52.6968;InbreedingCoeff=-0.1026;MQ=59.26;MQ0=2;MQRankSum=-0.614;QD=3.33;ReadPosRankSum=3.853;VQSLOD=0.2640;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:9.01:0,9,101	1/1:0,2:2:5.89:38,6,0	0/0:3,0:2:6.02:0,6,78	0/0:2,0:2:5.95:0,6,58	0/0:10,2:12:0.90:0,1,204	0/0:18,0:18:35.86:0,36,450	0/0:1,0:1:3.01:0,3,42	0/0:23,0:23:47.29:0,47,446	0/0:7,0:7:18.46:0,18,208	0/1:8,3:10:18.59:19,0,103	0/1:5,1:6:2.57:3,0,76	0/1:6,0:6:5.94:6,0,61	0/0:6,0:6:17.91:0,18,176	0/0:5,0:5:14.98:0,15,161	0/1:6,5:11:63.35:63,0,99	./.	0/1:15,10:27:99:142,0,251	0/1:6,9:16:99:126,0,138	0/1:9,6:15:79.36:79,0,154	0/1:10,2:12:2.05:2,0,195	0/1:3,0:3:16.74:17,0,45	./.	0/0:4,0:4:12.04:0,12,167	0/0:4,0:4:12.04:0,12,167	0/0:3,0:3:9.03:0,9,129	0/0:7,0:7:21.07:0,21,298	0/0:9,0:9:26.89:0,27,207	0/0:18,0:17:51.09:0,51,637
chr10	81102526	.	AAAT	A	874.70	PASS	AB=0.790;AC=11;AF=0.204;AN=54;BaseQRankSum=10.248;DP=236;FS=6.924;HRun=0;HaplotypeScore=59.5806;InbreedingCoeff=-0.1224;MQ=61.70;MQ0=0;MQRankSum=-1.157;QD=7.54;ReadPosRankSum=4.643;VQSLOD=0.9782;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:8.92:0,9,84	1/1:0,2:2:6.01:62,6,0	0/0:3,0:2:6.02:0,6,84	0/0:3,0:3:6.02:0,6,83	0/1:10,2:12:23.70:24,0,126	0/0:18,0:18:17.38:0,17,437	0/0:1,0:1:3.01:0,3,42	0/0:23,0:23:55.75:0,56,289	0/0:7,0:7:14.89:0,15,244	0/1:7,3:10:51.90:75,0,52	0/1:5,1:6:20.47:20,0,44	0/1:6,0:6:3.48:3,0,73	0/0:7,0:7:18.40:0,18,151	0/0:5,0:5:14.64:0,15,136	0/1:6,5:11:52.66:124,0,53	./.	0/1:15,10:25:99:273,0,156	0/1:7,9:16:99:255,0,118	0/1:10,6:16:83.10:152,0,83	0/1:10,2:12:26.89:27,0,117	0/0:3,0:3:5.80:0,6,38	0/0:1,0:1:3.01:0,3,42	0/0:4,0:4:12.04:0,12,168	0/0:4,0:4:12.04:0,12,168	0/0:3,0:3:9.03:0,9,127	0/0:7,0:7:21.05:0,21,234	0/0:10,0:10:26.45:0,26,140	0/0:17,0:17:50.63:0,51,574
chr10	81103923	.	A	AT	11390.33	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-5.294;DP=461;FS=11.671;HRun=3;HaplotypeScore=45.4202;InbreedingCoeff=0.9959;MQ=69.15;MQ0=0;MQRankSum=1.307;QD=37.47;ReadPosRankSum=-0.738;VQSLOD=3.9241;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:33.10:0,33,396	1/1:0,8:8:24.08:336,24,0	0/0:7,0:7:21.06:0,21,252	0/0:7,0:7:21.05:0,21,237	1/1:0,32:33:99:1382,99,0	0/0:17,0:17:51.16:0,51,612	0/0:9,0:9:27.08:0,27,324	1/1:4,20:24:57.19:798,57,0	0/0:21,0:21:63.19:0,63,756	1/1:5,15:20:45.15:630,45,0	1/1:0,24:24:69.23:966,69,0	0/0:12,0:12:36.11:0,36,432	0/0:19,0:19:54.16:0,54,648	0/0:10,0:10:30.09:0,30,360	1/1:0,15:15:39.13:546,39,0	1/1:0,13:13:33.11:462,33,0	1/1:0,14:14:42.14:588,42,0	1/1:0,19:19:54.18:756,54,0	1/1:2,13:15:36.10:473,36,0	1/1:2,27:29:81.27:1134,81,0	1/1:0,5:5:15.05:210,15,0	0/0:13,0:13:39.12:0,39,468	0/0:20,0:20:60.17:0,60,708	0/0:10,0:10:30.09:0,30,360	1/1:0,24:24:63.21:882,63,0	1/1:1,15:16:45.15:630,45,0	1/1:3,29:32:78.26:1092,78,0	1/1:0,13:13:36.12:504,36,0
chr10	81104070	.	ATC	A	14560.40	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=12.774;DP=575;FS=5.965;HRun=0;HaplotypeScore=77.0348;InbreedingCoeff=0.9713;MQ=77.66;MQ0=1;MQRankSum=-3.426;QD=35.69;ReadPosRankSum=0.745;VQSLOD=6.5537;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:48.16:660,48,0	1/1:0,10:10:24.08:330,24,0	0/0:18,0:18:45.15:0,45,770	0/0:24,0:24:60.21:0,60,1043	1/1:1,25:26:72.24:989,72,0	0/0:22,0:22:60.21:0,60,1064	0/0:16,0:16:42.14:0,42,741	1/1:0,37:37:99:1459,111,0	0/0:25,0:25:72.25:0,72,1273	1/1:1,28:29:81.25:1095,81,0	1/1:0,24:24:63.21:857,63,0	0/0:20,0:20:60.18:0,60,1033	1/1:1,18:19:51.17:700,51,0	1/1:1,18:19:54.18:742,54,0	1/1:3,21:24:60.20:825,60,0	1/1:2,23:24:57.19:783,57,0	1/1:3,8:11:18.06:247,18,0	1/1:0,18:18:51.17:701,51,0	1/1:2,15:17:45.15:617,45,0	1/1:1,33:34:84.28:1154,84,0	1/1:0,26:26:69.23:948,69,0	0/0:14,0:14:33.11:0,33,586	0/0:14,0:14:39.13:0,39,692	0/0:14,0:14:36.12:0,36,639	1/1:1,19:20:48.16:660,48,0	1/1:2,20:22:60.18:804,60,0	1/1:4,24:28:69.23:948,69,0	1/1:0,1:1:3.01:41,3,0
chr10	81104334	.	TA	T	8791.86	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=11.392;DP=524;FS=2.584;HRun=8;HaplotypeScore=51.4517;InbreedingCoeff=0.9889;MQ=76.23;MQ0=0;MQRankSum=-0.746;QD=25.12;ReadPosRankSum=0.900;VQSLOD=5.6212;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:18.01:0,18,201	1/1:2,9:11:21.03:203,21,0	0/0:12,0:11:10.38:0,10,251	0/0:12,0:11:21.88:0,22,226	1/1:2,39:41:99:1101,114,0	0/0:18,0:18:48.15:0,48,580	0/0:11,0:11:27.08:0,27,324	1/1:2,25:27:75.10:718,75,0	0/0:10,0:9:30.08:0,30,349	1/1:1,37:38:99:1081,114,0	1/1:0,24:24:63.02:596,63,0	0/0:17,0:17:45.14:0,45,544	0/0:17,0:17:48.15:0,48,580	0/0:22,0:22:60.17:0,60,713	1/1:1,17:18:42.07:406,42,0	1/1:3,20:23:57.09:550,57,0	1/1:1,8:9:18.03:174,18,0	1/1:2,8:10:18.03:174,18,0	1/1:2,14:16:42.06:401,42,0	1/1:2,24:26:63.09:608,63,0	1/1:0,14:14:39.06:376,39,0	0/0:16,0:16:45.13:0,45,534	0/0:22,0:22:66.20:0,66,797	0/0:9,0:9:24.07:0,24,290	1/1:0,17:17:51.08:493,51,0	1/1:2,29:31:87.14:840,87,0	1/1:4,27:30:75.11:724,75,0	1/1:0,14:14:36.06:347,36,0
chr10	81106077	.	C	CTG	533.81	PASS	AB=0.960;AC=25;AF=0.543;AN=46;BaseQRankSum=5.989;DP=528;FS=15.259;HRun=0;HaplotypeScore=126.1355;InbreedingCoeff=0.4729;MQ=58.19;MQ0=7;MQRankSum=-3.646;QD=1.91;ReadPosRankSum=-4.837;VQSLOD=-0.5591;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,1:23:0:0,0,0	./.	0/0:17,0:10:2.98:0,3,22	0/0:25,0:17:0.78:0,1,19	./.	0/0:27,0:27:35.23:0,35,266	0/0:28,0:27:41.92:0,42,357	1/1:30,0:26:13.14:86,13,0	0/1:29,0:29:3.51:4,0,187	1/1:18,0:16:5.79:36,6,0	1/1:10,0:10:3:25,3,0	0/0:24,0:24:37.64:0,38,282	1/1:15,0:14:9.40:67,9,0	0/1:16,0:15:0:0,0,0	1/1:13,0:12:2.99:24,3,0	0/0:17,1:16:5.83:0,6,37	0/1:20,1:22:2.64:52,0,3	./.	1/1:17,0:14:8.97:80,9,0	1/1:14,0:14:5.94:41,6,0	./.	0/0:27,0:27:8.01:0,8,93	0/1:20,1:19:40.50:40,0,78	0/0:34,0:35:19.77:0,20,238	1/1:12,0:12:2.94:18,3,0	1/1:25,0:24:18.22:140,18,0	1/1:10,1:11:5.99:72,6,0	./.
chr10	81106106	.	TGTGAGAGAGA	T	2231.82	PASS	AB=0.986;AC=17;AF=0.354;AN=48;BaseQRankSum=3.062;DP=432;FS=15.996;HRun=0;HaplotypeScore=140.4510;InbreedingCoeff=-0.4237;MQ=41.45;MQ0=14;MQRankSum=2.299;QD=8.00;ReadPosRankSum=3.085;VQSLOD=1.6012;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:2.99:0,3,23	./.	0/0:6,0:1:2.94:0,3,18	0/0:18,0:5:12.84:0,13,95	./.	0/1:22,0:22:99:140,0,293	0/0:33,0:32:12.29:0,12,1152	0/1:21,0:13:99:119,0,147	0/1:30,1:31:99:380,0,175	0/1:10,0:6:62.88:63,0,110	0/0:9,0:9:3:0,3,25	0/1:22,1:23:99:323,0,196	0/1:14,0:12:59.14:163,0,59	0/1:12,0:11:0:0,0,0	0/0:16,0:15:2.55:0,3,25	0/1:16,0:14:26.17:26,0,29	0/1:14,0:13:30.16:30,0,138	0/1:3,0:3:16.83:69,0,17	0/1:11,0:10:58.91:59,0,95	0/0:12,0:12:6:0,6,61	./.	0/1:17,3:20:47.36:185,0,47	0/1:19,0:16:97.75:98,0,141	0/1:36,0:35:99:435,0,169	0/0:9,0:9:6.01:0,6,61	0/1:17,0:16:99:104,0,258	1/1:10,0:10:8.97:176,9,0	./.
chr10	81106108	.	TGAGAGAGA	T	3669.67	PASS	AB=0.878;AC=22;AF=0.478;AN=46;BaseQRankSum=-0.639;DP=426;FS=25.370;HRun=0;HaplotypeScore=128.3608;InbreedingCoeff=-0.0924;MQ=41.24;MQ0=15;MQRankSum=0.625;QD=12.40;ReadPosRankSum=0.277;VQSLOD=0.8746;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:6,0:2:3.01:0,3,94	0/0:20,0:7:6.02:0,6,185	./.	0/1:19,2:21:2.97:272,0,3	0/0:33,0:32:41.79:0,42,994	1/1:15,5:12:14.96:158,15,0	0/1:23,7:31:0.07:641,0,0	0/1:8,2:6:36.60:67,0,37	./.	0/1:19,2:22:25.82:487,0,26	0/1:13,0:11:11.76:202,0,12	0/1:8,2:11:0.02:0,0,0	0/1:9,7:15:0.26:0,0,0	0/1:9,6:13:37.64:72,0,38	0/1:13,0:12:18.11:43,0,18	0/1:4,0:4:19.02:70,0,19	0/1:11,0:10:16.72:70,0,17	0/0:7,5:12:2.94:0,3,18	0/1:8,0:6:0:0,0,0	1/1:17,2:20:6.37:299,6,0	0/1:15,2:16:13.95:225,0,14	1/1:30,6:35:32.91:744,33,0	0/0:7,1:9:2.94:0,3,18	0/1:14,2:15:15.81:142,0,16	1/1:8,1:9:9.50:176,10,0	./.
chr10	81106125	.	G	GAC	1330.43	PASS	AB=0.985;AC=29;AF=0.558;AN=52;BaseQRankSum=1.316;DP=456;FS=4.102;HRun=0;HaplotypeScore=113.1446;InbreedingCoeff=0.0767;MQ=45.84;MQ0=31;MQRankSum=-0.522;QD=4.46;ReadPosRankSum=-0.733;VQSLOD=2.1160;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:16:0:0,0,0	1/1:8,0:8:11.89:85,12,0	0/0:43,0:11:14.10:0,14,99	0/0:60,0:12:20.32:0,20,172	1/1:15,0:13:5.98:48,6,0	0/1:15,0:15:56.18:77,0,56	0/0:33,0:32:63.02:0,63,690	1/1:10,0:6:14.99:158,15,0	0/1:30,0:30:99:202,0,121	1/1:10,0:7:11.80:87,12,0	./.	0/1:20,0:20:4.23:4,0,111	0/1:12,0:11:7.17:22,0,7	0/0:9,0:8:2.22:0,2,7	0/1:17,0:16:0.05:0,0,0	0/1:16,0:15:41.24:44,0,41	0/1:7,0:7:41.50:42,0,53	1/1:5,0:5:8.42:46,8,0	1/1:11,0:8:14.62:98,15,0	0/1:11,0:11:11.83:18,0,12	0/1:6,0:4:0.02:0,0,0	0/1:18,2:20:26.41:115,0,26	0/1:16,2:15:55.70:90,0,56	0/1:31,0:30:99:197,0,150	0/0:5,0:5:2.94:0,3,18	1/1:8,0:7:12.10:61,12,0	1/1:10,0:10:15.06:94,15,0	./.
chr10	81106198	.	G	GGA	11078.79	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-0.593;DP=611;FS=7.268;HRun=0;HaplotypeScore=159.6823;InbreedingCoeff=0.6744;MQ=69.18;MQ0=12;MQRankSum=-0.070;QD=21.06;ReadPosRankSum=4.874;VQSLOD=5.0970;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,12:15:15.04:203,15,0	1/1:7,5:12:27.09:422,27,0	0/0:61,0:32:26.52:0,27,479	0/1:92,0:46:24.11:24,0,272	1/1:10,5:14:21.07:342,21,0	1/1:2,10:13:24.08:363,24,0	0/0:24,0:24:24.64:0,25,500	1/1:12,8:15:30.04:451,30,0	1/1:3,25:29:48.11:764,48,0	1/1:10,16:26:64.76:1028,65,0	1/1:5,8:14:8.53:339,9,0	1/1:4,24:28:51.07:833,51,0	1/1:1,9:12:18.06:287,18,0	1/1:2,20:22:33.11:541,33,0	1/1:10,10:21:17.89:259,18,0	1/1:6,3:9:11.99:150,12,0	1/1:1,8:9:16.30:255,16,0	1/1:5,6:11:21.01:340,21,0	1/1:5,2:5:12.04:195,12,0	1/1:10,8:18:15.05:234,15,0	1/1:3,11:14:6.02:75,6,0	1/1:2,16:18:30.10:505,30,0	1/1:2,15:17:22.89:376,23,0	1/1:15,27:41:68.33:1032,68,0	1/1:4,7:11:21.05:335,21,0	1/1:9,18:27:63.08:970,63,0	1/1:7,11:18:38.96:569,39,0	1/1:1,4:5:12.04:187,12,0
chr10	81106232	.	GGA	G	2658.59	PASS	AB=0.778;AC=35;AF=0.648;AN=54;BaseQRankSum=8.247;DP=514;FS=4.204;HRun=0;HaplotypeScore=139.7246;InbreedingCoeff=0.7675;MQ=55.08;MQ0=26;MQRankSum=-7.249;QD=13.63;ReadPosRankSum=0.409;VQSLOD=3.6148;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:5,2:7:0:0,0,0	1/1:1,5:6:12.03:138,12,0	0/0:55,0:20:13.58:0,14,174	0/0:82,0:22:3.87:0,4,24	1/1:4,11:15:3:25,3,0	0/0:19,0:19:36.11:0,36,545	0/0:21,0:21:12.99:0,13,687	1/1:11,7:16:23.92:296,24,0	0/0:30,0:30:54.18:0,54,855	1/1:6,18:24:57.18:717,57,0	1/1:5,10:14:14.65:153,15,0	0/0:25,0:25:60.20:0,60,952	1/1:3,3:6:9.03:110,9,0	1/1:7,8:15:14.40:147,14,0	1/1:6,3:9:2.97:38,3,0	1/1:1,5:6:6.02:76,6,0	1/1:8,0:8:5.66:32,6,0	1/1:6,1:7:12.02:131,12,0	1/1:2,1:3:3.01:38,3,0	1/1:3,7:10:9.03:109,9,0	./.	0/0:20,0:20:45.14:0,45,697	0/0:17,0:16:28.77:0,29,522	0/0:37,0:36:53.56:0,54,972	1/1:1,8:9:5.56:75,6,0	1/1:7,11:17:36.06:432,36,0	1/1:3,12:15:21.07:265,21,0	1/1:4,0:4:6.02:70,6,0
chr10	81106255	.	C	CGGAG	113.61	PASS	AB=0.942;AC=8;AF=0.154;AN=52;BaseQRankSum=4.940;DP=483;FS=11.913;HRun=0;HaplotypeScore=158.8119;InbreedingCoeff=0.2324;MQ=42.55;MQ0=25;MQRankSum=-4.089;QD=2.52;ReadPosRankSum=-2.640;VQSLOD=1.2693;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,2:6:2.92:19,3,0	0/0:7,0:7:12.04:0,12,242	0/0:42,0:6:11.89:0,12,141	0/0:67,0:14:9.71:0,10,121	./.	0/0:19,0:19:45.13:0,45,865	0/0:23,0:23:57.15:0,57,1062	0/0:19,0:13:27.02:0,27,471	0/0:31,0:31:60.16:0,60,1109	0/0:25,0:25:56.59:0,57,1009	0/0:17,0:17:20.97:0,21,436	0/0:24,0:24:60.14:0,60,1171	1/1:3,1:4:3.62:32,4,0	0/1:9,1:10:6.01:58,0,6	0/0:9,0:9:5.80:0,6,126	0/0:7,0:7:9.03:0,9,186	0/1:5,0:6:56.25:56,0,172	0/1:3,0:3:54.53:55,0,116	0/0:8,0:5:9.03:0,9,187	0/1:15,0:15:19.32:19,0,196	0/0:12,0:12:2.73:0,3,40	0/0:18,0:18:51.16:0,51,1013	0/0:12,0:12:33.07:0,33,573	0/0:37,0:35:44.12:0,44,1152	0/0:15,0:15:9.69:0,10,178	0/0:13,0:13:39.13:0,39,804	0/0:16,0:16:32.98:0,33,533	./.
chr10	81106281	.	A	AAG	4690.99	PASS	AB=0.571;AC=32;AF=0.615;AN=52;BaseQRankSum=10.846;DP=506;FS=14.701;HRun=0;HaplotypeScore=153.4919;InbreedingCoeff=0.8408;MQ=62.11;MQ0=14;MQRankSum=-8.823;QD=22.02;ReadPosRankSum=-4.130;VQSLOD=3.7163;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:3,6:8:15.05:248,15,0	1/1:1,4:5:9.03:153,9,0	0/0:57,0:15:6.20:0,6,370	0/0:74,0:33:29.12:0,29,323	0/1:4,11:15:0.08:0,0,0	0/0:20,0:20:57.15:0,57,722	0/0:20,0:20:51.04:0,51,606	1/1:6,13:14:21.03:314,21,0	0/0:28,0:28:45.10:0,45,566	1/1:14,8:22:33.11:532,33,0	1/1:11,9:20:21:325,21,0	0/0:22,0:22:57.14:0,57,722	1/1:3,4:7:13.29:192,13,0	1/1:2,4:6:8.39:93,8,0	1/1:5,9:15:27:385,27,0	1/1:4,6:10:27.09:397,27,0	1/1:4,3:7:0.10:141,0,0	1/1:2,3:6:4.14:146,4,0	./.	1/1:5,13:18:33.11:504,33,0	0/1:3,10:13:0:0,0,0	0/0:21,0:21:60.19:0,60,778	0/0:13,0:13:33.11:0,33,428	0/0:33,0:31:51.47:0,51,645	1/1:6,8:14:24.08:342,24,0	1/1:8,7:16:35.30:555,35,0	1/1:3,8:11:24.01:364,24,0	./.
chr10	81106323	.	GGA	G	391.45	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.227;DP=470;FS=5.952;HRun=0;HaplotypeScore=170.1152;InbreedingCoeff=0.7028;MQ=77.73;MQ0=7;MQRankSum=-3.121;QD=20.60;ReadPosRankSum=-1.969;VQSLOD=2.8873;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:9:20.80:248,21,0	0/0:6,0:6:12.04:0,12,201	0/0:46,0:26:29:0,29,449	0/0:68,0:40:15.33:0,15,285	0/0:17,0:17:2.85:0,3,51	0/0:19,0:19:36.12:0,36,604	0/0:16,0:16:36.12:0,36,581	0/0:31,0:29:72.17:0,72,1111	0/0:20,0:20:30.05:0,30,451	0/0:10,0:10:21.07:0,21,349	0/0:9,0:9:14.96:0,15,207	0/0:21,0:21:48.05:0,48,707	1/1:3,7:10:21.31:261,21,0	0/0:2,1:3:0:0,0,0	0/0:17,0:17:23.97:0,24,367	0/0:11,0:11:30.10:0,30,501	0/0:7,0:7:10.70:0,11,169	0/0:7,0:7:14.37:0,14,173	0/0:11,0:11:15.05:0,15,252	0/0:20,0:20:29.90:0,30,476	0/0:11,0:11:3.38:0,3,85	0/0:22,0:22:48.08:0,48,745	0/0:13,0:13:24.08:0,24,402	0/0:24,0:23:56.96:0,57,834	0/0:15,0:15:15.05:0,15,226	0/0:16,0:16:45.07:0,45,650	0/0:9,0:9:21.07:0,21,351	0/0:1,0:1:3.01:0,3,50
chr10	81106372	.	GA	G	2210.61	PASS	AB=0.895;AC=47;AF=0.870;AN=54;BaseQRankSum=-4.317;DP=366;FS=7.284;HRun=2;HaplotypeScore=138.6542;InbreedingCoeff=0.1633;MQ=66.61;MQ0=0;MQRankSum=-1.829;QD=6.66;ReadPosRankSum=2.605;VQSLOD=0.7628;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:4:3.01:39,3,0	1/1:2,1:3:2.98:21,3,0	0/1:27,5:19:38.75:39,0,339	0/1:42,5:25:70.04:70,0,299	0/1:10,1:11:1.25:19,0,1	1/1:10,0:9:10.04:85,10,0	1/1:0,11:11:21.07:272,21,0	1/1:15,3:16:30.97:354,31,0	1/1:17,2:19:12.63:109,13,0	1/1:6,1:7:10.44:118,10,0	0/0:8,1:9:0:0,0,0	1/1:11,5:16:18.01:185,18,0	1/1:7,3:10:10.44:118,10,0	1/1:3,2:5:5.52:45,6,0	1/1:17,2:19:12.84:124,13,0	1/1:12,0:12:1.83:4,2,0	1/1:3,2:5:9.03:113,9,0	1/1:2,2:4:3.48:34,3,0	1/1:6,1:7:13.12:173,13,0	./.	0/0:6,6:12:1.38:0,1,5	1/1:16,3:19:13.09:96,13,0	1/1:9,3:12:7.82:39,8,0	1/1:13,3:16:6.74:95,7,0	1/1:18,0:17:3.66:7,4,0	1/1:8,3:11:14.69:120,15,0	1/1:15,0:15:5.31:35,5,0	1/1:1,0:1:0.47:1,0,0
chr10	81106373	.	A	AGACAG	10288.99	PASS	AB=1.000;AC=47;AF=0.870;AN=54;BaseQRankSum=-4.436;DP=359;FS=5.073;HRun=0;HaplotypeScore=123.0333;InbreedingCoeff=0.4139;MQ=67.32;MQ0=0;MQRankSum=-2.408;QD=36.10;ReadPosRankSum=1.377;VQSLOD=4.4952;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:5:3.01:39,3,0	1/1:2,0:3:3.01:72,3,0	0/1:30,0:19:17.65:18,0,341	0/0:44,0:25:30.11:0,30,327	1/1:2,7:10:2.66:24,3,0	1/1:4,8:13:21.07:661,21,0	0/0:11,0:11:3.18:0,3,99	1/1:3,11:14:42.14:1055,42,0	1/1:2,17:19:27.09:829,27,0	1/1:1,5:6:18.06:415,18,0	0/0:1,6:7:0:0,0,0	1/1:7,9:17:39.13:1000,39,0	1/1:8,4:13:21.07:532,21,0	1/1:3,2:5:9.03:238,9,0	1/1:3,15:18:24.55:616,25,0	1/1:0,8:10:9.03:299,9,0	1/1:2,0:5:9.03:113,9,0	1/1:2,1:4:5.51:109,6,0	1/1:1,6:7:21.03:375,21,0	./.	1/1:7,2:9:2.72:99,3,0	1/1:5,11:20:39.12:1111,39,0	1/1:6,7:13:14.64:341,15,0	1/1:8,7:16:20.86:495,21,0	1/1:0,17:17:18.06:597,18,0	1/1:5,4:10:27.05:652,27,0	1/1:0,14:15:15.01:498,15,0	1/1:1,1:2:3.01:100,3,0
chr10	81106388	.	G	GA	2476.47	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-0.312;DP=295;FS=20.607;HRun=1;HaplotypeScore=115.9505;InbreedingCoeff=0.7746;MQ=56.83;MQ0=0;MQRankSum=-2.983;QD=13.91;ReadPosRankSum=-0.084;VQSLOD=1.7405;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,3:4:8.12:106,8,0	1/1:2,2:4:6.01:63,6,0	0/0:14,0:11:9.05:0,9,125	0/0:10,0:7:14.82:0,15,166	1/1:5,4:9:2.60:10,3,0	0/0:14,0:13:33.07:0,33,389	0/0:10,0:10:21.02:0,21,253	1/1:5,6:10:17.93:268,18,0	0/0:12,0:12:27.05:0,27,303	1/1:6,2:6:18.05:228,18,0	1/1:5,3:8:2.69:42,3,0	0/0:18,0:18:47.88:0,48,613	1/1:4,10:14:35.39:345,35,0	1/1:4,6:10:15.02:163,15,0	1/1:13,8:21:33.43:380,33,0	1/1:6,1:7:3.01:34,3,0	1/1:3,3:6:0.21:130,0,0	1/1:0,2:2:6.02:81,6,0	1/1:3,2:5:13.21:121,13,0	1/1:6,5:10:9.02:92,9,0	1/1:4,7:11:5.52:45,6,0	0/0:14,0:14:35.64:0,36,363	0/0:12,0:11:15.48:0,15,213	0/0:12,0:12:17.66:0,18,178	1/1:14,3:17:14.29:92,14,0	1/1:1,10:10:27.06:315,27,0	1/1:13,1:14:8.91:71,9,0	1/1:3,2:5:8.94:91,9,0
chr10	81106395	.	AG	A	2343.07	PASS	AB=0.728;AC=50;AF=0.893;AN=56;BaseQRankSum=-1.317;DP=300;FS=20.082;HRun=7;HaplotypeScore=113.3776;InbreedingCoeff=-0.0052;MQ=54.94;MQ0=0;MQRankSum=-0.846;QD=7.81;ReadPosRankSum=1.723;VQSLOD=0.3838;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:5:8.84:37,9,0	1/1:1,4:5:10.66:56,11,0	0/1:8,0:6:7.85:8,0,33	0/1:5,0:5:3.20:3,0,8	0/1:1,7:8:1.01:11,0,1	0/1:2,15:16:7.47:140,0,7	0/1:4,7:11:23.19:58,0,23	1/1:5,9:14:17.80:174,18,0	1/1:4,9:13:9.64:178,10,0	1/1:7,3:8:19.64:100,20,0	0/1:5,4:9:8.56:17,0,9	1/1:2,16:18:7.31:235,7,0	1/1:2,11:13:22.51:113,23,0	1/1:5,6:11:20.55:108,21,0	1/1:12,7:19:22.39:117,22,0	1/1:6,1:7:2.80:13,3,0	1/1:2,4:6:14.27:77,14,0	1/1:0,1:1:2.90:16,3,0	1/1:3,2:5:4.68:33,5,0	1/1:6,8:13:17.03:86,17,0	1/1:6,5:11:2.37:10,2,0	1/1:0,12:12:32.84:263,33,0	1/1:5,9:13:24.09:164,24,0	1/1:6,9:15:3.63:139,4,0	1/1:11,5:16:8.75:58,9,0	1/1:3,9:11:21.01:104,21,0	1/1:11,4:15:14.47:95,14,0	1/1:4,2:6:8.67:48,9,0
chr10	81106504	.	CT	C	633.20	PASS	AB=0.947;AC=7;AF=0.125;AN=56;BaseQRankSum=-5.035;DP=475;FS=0.000;HRun=13;HaplotypeScore=72.3053;InbreedingCoeff=0.7045;MQ=68.80;MQ0=1;MQRankSum=-0.475;QD=8.22;ReadPosRankSum=-0.463;VQSLOD=2.5159;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,22:29:41.41:323,41,0	0/0:1,0:8:17.79:0,18,103	0/1:16,1:14:19.24:19,0,48	0/0:9,0:8:3.08:0,3,31	0/0:2,0:16:8.04:0,8,59	0/0:3,0:8:8.69:0,9,58	0/0:18,1:20:25.99:0,26,395	0/0:7,0:25:41.79:0,42,241	0/0:9,0:17:30.11:0,30,181	0/0:4,0:19:31.33:0,31,160	0/0:1,0:13:19.54:0,20,107	0/0:7,0:21:34.71:0,35,221	1/1:4,14:18:38.77:284,39,0	1/1:3,9:12:20.88:153,21,0	0/0:4,0:23:25.69:0,26,131	0/0:5,0:17:11.36:0,11,58	0/0:7,0:27:34.09:0,34,172	0/0:4,0:11:20:0,20,105	0/0:14,0:18:32.70:0,33,151	0/0:2,0:16:27.84:0,28,143	0/0:1,0:9:11.27:0,11,55	0/0:3,0:12:26.05:0,26,152	0/0:6,0:23:36.12:0,36,188	0/0:2,0:9:11.36:0,11,57	0/0:1,0:17:11.36:0,11,57	0/0:0,0:16:33.17:0,33,198	0/0:10,0:29:30.75:0,31,174	0/0:3,0:9:8.52:0,9,43
chr10	81107038	.	CCCAGAGAGAG	C	1337.04	PASS	AB=0.892;AC=34;AF=0.654;AN=52;BaseQRankSum=4.921;DP=432;FS=3.744;HRun=0;HaplotypeScore=220.8171;InbreedingCoeff=0.2005;MQ=46.10;MQ0=4;MQRankSum=-2.712;QD=4.19;ReadPosRankSum=2.810;VQSLOD=2.4919;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:4.94:24,5,0	0/0:2,0:2:2.50:0,2,9	0/0:23,0:16:5.12:0,5,296	0/0:26,0:16:16.59:0,17,333	1/1:17,1:19:8.73:62,9,0	1/1:13,1:11:0.43:1,0,0	0/0:14,0:14:35.82:0,36,573	1/1:9,0:21:22.34:103,22,0	./.	1/1:17,0:26:0.30:97,0,0	1/1:11,2:15:3.73:12,4,0	1/1:8,0:5:5.04:38,5,0	0/1:20,3:23:4.88:200,0,5	0/0:11,0:13:1.81:0,2,7	1/1:14,5:19:8.84:129,9,0	1/1:14,2:18:7.06:228,7,0	0/1:15,2:18:35.52:99,0,36	0/1:4,0:5:6.69:17,0,7	0/1:9,0:8:14.56:30,0,15	1/1:17,2:19:4.56:14,5,0	1/1:11,0:11:2.52:59,3,0	0/0:12,0:11:0.47:0,0,1	1/1:18,0:18:0.47:1,0,0	./.	1/1:16,4:20:13.86:66,14,0	0/1:10,0:17:18.57:19,0,26	1/1:8,2:10:17.88:206,18,0	0/1:5,1:6:31.09:78,0,31
chr10	81107225	.	CGTGTGTGTGTGTGT	C	7732.26	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=8.211;DP=502;FS=14.126;HRun=0;HaplotypeScore=218.6622;InbreedingCoeff=0.8450;MQ=65.03;MQ0=5;MQRankSum=-8.175;QD=34.83;ReadPosRankSum=3.549;VQSLOD=3.0579;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:19:19.31:0,19,989	1/1:3,0:8:15.05:288,15,0	0/0:29,0:21:15.05:0,15,626	0/0:34,0:19:15.05:0,15,651	1/1:6,8:15:12.04:471,12,0	0/0:13,0:29:27.09:0,27,1661	0/0:19,0:23:36.12:0,36,1908	0/0:27,0:26:4.19:0,4,21	0/0:6,0:16:12.04:0,12,652	1/1:8,8:17:21.07:806,21,0	1/1:8,4:12:9.03:272,9,0	0/0:5,0:10:12.04:0,12,692	0/0:13,0:25:33.58:0,34,2013	0/0:10,0:20:27.56:0,28,1560	1/1:5,7:12:17.93:606,18,0	1/1:8,9:18:21.54:807,22,0	1/1:20,8:26:12.04:472,12,0	1/1:4,1:6:3.85:172,4,0	1/1:14,5:17:12.02:378,12,0	1/1:8,10:18:27.09:1063,27,0	1/1:11,3:14:3.01:118,3,0	0/0:14,0:14:21.07:0,21,1187	0/0:8,0:16:14.33:0,14,712	0/0:9,0:18:20.10:0,20,775	1/1:5,8:15:27.09:1022,27,0	1/1:6,13:20:28.59:1021,29,0	1/1:9,4:13:3.01:118,3,0	1/1:5,2:7:3.01:118,3,0
chr10	81108033	.	A	AT	7659.13	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-8.093;DP=606;FS=0.000;HRun=1;HaplotypeScore=59.3446;InbreedingCoeff=0.9983;MQ=68.19;MQ0=0;MQRankSum=-0.035;QD=38.88;ReadPosRankSum=1.607;VQSLOD=5.3783;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:22:57.16:830,57,0	0/0:17,0:17:51.17:0,51,662	0/0:14,0:14:25.58:0,26,314	0/0:7,0:7:21.06:0,21,262	0/0:29,0:29:75.24:0,75,972	1/1:2,13:15:39.10:560,39,0	0/0:17,0:17:51.17:0,51,661	0/0:34,0:34:96.30:0,96,1229	1/1:2,19:20:51.10:711,51,0	0/0:31,0:31:87.28:0,87,1129	0/0:30,0:30:84.24:0,84,1060	1/1:1,18:19:54.17:790,54,0	1/1:1,17:18:54.15:785,54,0	1/1:1,16:17:42.14:629,42,0	0/0:14,0:14:42.14:0,42,545	0/0:25,0:25:69.22:0,69,896	0/0:23,0:23:57.18:0,57,738	0/0:15,0:15:42.14:0,42,545	0/0:9,0:9:27.09:0,27,349	0/0:36,0:36:99:0,105,1333	0/0:14,0:14:39.13:0,39,504	1/1:2,32:34:96.30:1401,96,0	1/1:0,32:32:87.29:1303,87,0	1/1:0,18:17:45.11:649,45,0	0/0:34,0:33:96.29:0,96,1229	0/0:18,0:17:51.16:0,51,650	0/0:33,0:32:93.30:0,93,1208	0/0:9,0:9:21.07:0,21,273
chr10	81108096	.	C	CTT	1773.24	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=1.106;DP=493;FS=7.797;HRun=12;HaplotypeScore=96.3706;InbreedingCoeff=0.8991;MQ=55.88;MQ0=3;MQRankSum=-4.415;QD=15.83;ReadPosRankSum=-2.457;VQSLOD=1.9540;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:78.03:0,78,716	0/0:11,0:11:20.95:0,21,194	0/0:7,0:4:8.98:0,9,78	0/1:6,0:5:0:0,0,0	0/0:26,0:28:43.93:0,44,428	1/1:3,8:10:24.08:323,24,0	0/0:16,0:16:32.99:0,33,305	0/0:23,0:25:47.15:0,47,407	1/1:7,9:13:30.03:361,30,0	0/0:19,0:19:38.97:0,39,353	0/0:17,0:18:32.49:0,32,285	1/1:11,4:13:29.51:273,30,0	0/0:12,0:12:17.87:0,18,165	0/0:20,0:20:40.61:0,41,355	0/0:15,0:15:28.74:0,29,276	0/0:16,0:17:38.74:0,39,345	0/0:24,0:25:52.42:0,52,554	0/0:15,0:15:36.02:0,36,333	0/0:16,0:15:23.82:0,24,264	0/0:17,0:18:32.84:0,33,300	0/0:10,0:11:1.49:0,1,147	1/1:9,11:18:28.58:340,29,0	1/1:16,13:21:38.99:434,39,0	1/1:5,5:8:18.04:226,18,0	0/0:24,0:25:32.63:0,33,340	0/0:12,0:13:20.82:0,21,237	0/0:24,0:25:38.43:0,38,407	0/0:8,0:9:8.83:0,9,130
chr10	81108114	.	TC	T	1622.99	PASS	AB=0.975;AC=30;AF=0.536;AN=56;BaseQRankSum=5.658;DP=473;FS=8.961;HRun=1;HaplotypeScore=79.1089;InbreedingCoeff=-0.4018;MQ=50.89;MQ0=11;MQRankSum=-1.387;QD=3.58;ReadPosRankSum=8.123;VQSLOD=-0.5490;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:35,1:31:1.98:143,0,2	0/1:13,0:13:29.19:35,0,29	0/0:5,0:4:8.78:0,9,73	0/0:1,0:1:2.80:0,3,13	0/1:29,0:29:44.41:44,0,142	1/1:21,0:17:10.56:74,11,0	0/0:13,0:12:36.05:0,36,461	0/1:22,0:22:59.61:60,0,115	0/1:9,4:10:17.25:48,0,17	0/1:20,0:19:16.83:53,0,17	0/1:18,1:19:40.91:48,0,41	0/1:14,1:12:3.24:53,0,3	0/1:9,0:9:29.14:29,0,38	1/1:15,1:16:33.81:181,34,0	0/1:12,1:13:0.79:70,0,1	0/1:15,0:15:58.27:58,0,67	1/1:28,2:29:36.84:248,37,0	0/1:16,1:16:17.85:98,0,18	0/1:16,0:13:17.53:34,0,18	0/1:19,0:18:37.90:61,0,38	0/1:10,0:10:3.26:19,0,3	1/1:20,0:17:1.40:79,1,0	0/1:23,0:14:23.34:53,0,23	0/1:10,0:8:3.96:34,0,4	0/1:19,0:19:11.28:72,0,11	0/1:13,0:11:17.61:18,0,53	1/1:22,1:23:3.32:146,3,0	0/1:12,0:12:17.33:17,0,29
chr10	81108115	.	CT	C	7755.59	PASS	AB=0.586;AC=49;AF=0.875;AN=56;BaseQRankSum=0.474;DP=474;FS=1.860;HRun=8;HaplotypeScore=60.4459;InbreedingCoeff=0.7114;MQ=50.88;MQ0=11;MQRankSum=-0.680;QD=17.01;ReadPosRankSum=1.504;VQSLOD=4.8706;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,30:31:50.85:761,51,0	1/1:2,10:13:13.73:193,14,0	0/0:4,0:3:7.36:0,7,48	0/0:1,0:1:0:0,0,0	1/1:6,22:29:39.04:374,39,0	1/1:4,17:17:29.88:289,30,0	0/0:13,0:12:36.10:0,36,420	1/1:6,16:22:42.02:397,42,0	1/1:8,6:11:17.98:166,18,0	1/1:3,17:19:48.02:456,48,0	1/1:6,14:20:30.04:290,30,0	1/1:6,9:12:19.23:200,19,0	1/1:3,5:8:15.02:145,15,0	1/1:3,13:16:35.69:335,36,0	1/1:2,11:13:30.04:289,30,0	1/1:3,11:14:27.04:260,27,0	1/1:5,25:29:75.12:722,75,0	0/1:5,12:16:0.17:282,0,0	1/1:6,11:14:27.63:294,28,0	1/1:5,14:18:36.05:347,36,0	1/1:2,8:10:21.03:203,21,0	1/1:9,13:19:8.44:258,8,0	1/1:6,17:14:24.04:232,24,0	1/1:6,4:8:5.98:58,6,0	1/1:3,16:19:45.07:434,45,0	1/1:6,7:11:11.53:139,12,0	1/1:6,17:23:44.79:429,45,0	1/1:2,10:12:21.03:203,21,0
chr10	81109301	.	TA	T	2563.58	PASS	AB=0.889;AC=7;AF=0.125;AN=56;BaseQRankSum=7.486;DP=647;FS=2.764;HRun=2;HaplotypeScore=77.4941;InbreedingCoeff=0.8195;MQ=71.50;MQ0=0;MQRankSum=0.130;QD=30.16;ReadPosRankSum=0.223;VQSLOD=3.2484;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:75.24:974,75,0	0/0:11,0:11:33.11:0,33,495	0/0:9,1:10:19.92:0,20,223	0/1:7,1:8:24.87:25,0,106	0/0:31,0:31:93.32:0,93,1394	0/0:35,0:35:99:0,99,1439	0/0:21,0:21:60.20:0,60,899	0/0:40,0:40:99:0,120,1781	0/0:25,0:25:69.20:0,69,1010	0/0:33,0:33:99:0,99,1484	0/0:24,0:24:66.22:0,66,985	0/0:24,0:24:72.24:0,72,1078	1/1:0,22:22:57.05:740,57,0	1/1:2,25:27:75.24:974,75,0	0/0:22,0:22:66.22:0,66,989	0/0:23,0:23:69.23:0,69,1016	0/0:32,0:31:93.32:0,93,1393	0/0:8,0:8:24.06:0,24,339	0/0:21,0:21:63.20:0,63,921	0/0:27,0:27:81.27:0,81,1214	0/0:16,0:16:48.16:0,48,719	0/0:25,0:25:72.24:0,72,1060	0/0:25,0:25:66.17:0,66,946	0/0:20,0:20:51:0,51,764	0/0:26,0:26:78.25:0,78,1150	0/0:26,0:26:78.26:0,78,1169	0/0:34,0:34:96.33:0,96,1436	0/0:3,0:3:9.03:0,9,135
chr10	81109362	.	GACTCT	G	6321.37	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.962;DP=642;FS=0.392;HRun=0;HaplotypeScore=125.7905;InbreedingCoeff=0.9952;MQ=87.02;MQ0=0;MQRankSum=-3.531;QD=47.53;ReadPosRankSum=2.103;VQSLOD=5.0295;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:90.27:0,90,2591	0/0:8,0:8:18.06:0,18,525	0/0:24,0:24:63.22:0,63,1745	0/0:21,0:21:47.37:0,47,1270	0/0:31,0:31:87.30:0,87,2635	1/1:2,25:27:69.24:1390,69,0	0/0:17,0:17:48.16:0,48,1430	0/0:34,0:34:84.29:0,84,2476	1/1:3,16:19:42.14:841,42,0	0/0:27,0:27:75.26:0,75,2251	0/0:18,0:18:48.15:0,48,1372	1/1:3,14:17:45.15:912,45,0	0/0:21,0:21:60.21:0,60,1739	0/0:26,0:26:78.25:0,78,2269	0/0:22,0:22:63.20:0,63,1825	0/0:24,0:24:66.23:0,66,1978	0/0:29,0:29:72.25:0,72,2182	0/0:8,0:8:18.06:0,18,546	0/0:18,0:18:45.15:0,45,1235	0/0:20,0:20:57.20:0,57,1674	0/0:17,0:17:42.14:0,42,1254	1/1:2,22:24:51.17:1029,51,0	1/1:4,26:30:72.25:1425,72,0	1/1:0,16:16:36.12:725,36,0	0/0:25,0:25:66.23:0,66,2001	0/0:28,0:28:78.25:0,78,2365	0/0:47,0:47:99:0,135,3891	0/0:7,0:7:18.53:0,19,506
chr10	81111835	.	CGGTGA	C	29608.17	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=5.614;DP=611;FS=2.530;HRun=0;HaplotypeScore=165.8820;InbreedingCoeff=0.9712;MQ=74.49;MQ0=0;MQRankSum=-10.645;QD=53.64;ReadPosRankSum=5.553;VQSLOD=5.2043;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:48.10:1011,48,0	1/1:0,8:8:21.07:479,21,0	0/0:21,0:21:60.21:0,60,1863	0/0:17,0:17:36.28:0,36,1048	1/1:0,29:29:66.23:1505,66,0	1/1:0,17:17:36.12:829,36,0	0/0:21,0:21:63.22:0,63,2068	1/1:0,28:28:84.27:1816,84,0	1/1:0,25:25:75.14:1580,75,0	1/1:0,35:35:99:2436,105,0	1/1:0,27:27:51.18:1176,51,0	1/1:0,25:25:72.09:1470,72,0	1/1:2,20:22:54.03:1046,54,0	1/1:0,30:30:72.20:1598,72,0	1/1:0,21:21:45.15:1047,45,0	1/1:0,26:26:66.18:1487,66,0	1/1:0,12:12:30.06:647,30,0	1/1:0,7:7:15.05:340,15,0	1/1:0,15:15:42.12:888,42,0	1/1:0,29:29:69.24:1593,69,0	1/1:0,8:8:12.04:259,12,0	1/1:0,24:24:57.20:1308,57,0	1/1:0,31:31:60.12:1288,60,0	1/1:0,15:15:33.11:769,33,0	1/1:0,29:29:54.14:1197,54,0	1/1:1,23:24:69.23:1563,69,0	1/1:0,32:32:90.27:2025,90,0	1/1:0,9:9:12.04:248,12,0
chr10	81112515	.	AACACACACACACAC	A	8373.08	PASS	AB=0.765;AC=36;AF=0.667;AN=54;BaseQRankSum=5.913;DP=601;FS=0.762;HRun=0;HaplotypeScore=269.7221;InbreedingCoeff=0.2417;MQ=59.96;MQ0=10;MQRankSum=-5.227;QD=20.08;ReadPosRankSum=2.840;VQSLOD=3.0964;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:0.28:0,0,34	1/1:3,0:6:9.03:293,9,0	./.	0/0:33,0:20:3.01:0,3,43	1/1:16,6:22:21.54:573,22,0	0/1:18,0:29:6.36:6,0,535	0/0:25,0:30:39.13:0,39,1774	1/1:19,0:19:3:35,3,0	0/1:10,0:16:92.38:95,0,92	1/1:32,9:41:24.54:735,25,0	1/1:9,5:15:12.04:447,12,0	0/1:14,1:23:87.79:88,0,127	1/1:9,1:13:12.04:290,12,0	0/1:10,0:16:28.88:216,0,29	1/1:17,8:25:24.08:917,24,0	1/1:11,8:19:21.07:819,21,0	1/1:20,7:27:7.78:466,8,0	0/0:20,0:19:1.77:0,2,4	1/1:15,2:17:6.46:275,6,0	1/1:10,11:21:27.09:1053,27,0	0/0:24,0:23:0:0,0,0	1/1:12,0:16:8.82:53,9,0	0/1:16,1:24:99:143,0,180	0/0:20,0:23:5.95:0,6,42	1/1:17,7:24:21.54:799,22,0	0/1:16,1:17:72.99:272,0,73	1/1:11,6:17:15.05:585,15,0	1/1:3,2:6:6.02:215,6,0
chr10	81113675	.	CTCT	C	782	PASS	AB=0.966;AC=31;AF=0.705;AN=44;BaseQRankSum=-0.724;DP=183;FS=48.223;HRun=0;HaplotypeScore=38.7071;InbreedingCoeff=0.0527;MQ=26.89;MQ0=63;MQRankSum=-3.075;QD=5.32;ReadPosRankSum=-2.050;VQSLOD=0.0580;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,4:12:8.24:176,0,8	./.	./.	./.	./.	0/0:4,0:3:1.63:0,2,32	0/0:10,0:6:15.04:0,15,269	1/1:18,0:11:11.65:50,12,0	1/1:1,1:1:3.01:51,3,0	0/1:11,0:6:9.39:73,0,9	0/1:8,0:5:8.08:8,0,38	0/1:5,0:3:0.01:0,0,0	1/1:4,2:3:6.02:92,6,0	1/1:3,1:2:3.01:35,3,0	1/1:7,0:5:14.71:94,15,0	1/1:5,0:2:5.87:35,6,0	0/1:13,0:7:6.15:72,0,6	1/1:2,1:3:4.78:50,5,0	1/1:6,0:1:2.22:7,2,0	1/1:4,0:2:5.81:32,6,0	0/1:17,0:8:31.35:31,0,42	0/0:1,0:1:3.01:0,3,32	./.	1/1:8,0:3:2.83:16,3,0	1/1:2,0:2:5.91:38,6,0	0/1:11,0:8:27.81:32,0,28	./.	1/1:4,0:2:2.96:19,3,0
chr10	81113681	.	CTCT	C	724.45	PASS	AB=0.934;AC=25;AF=0.595;AN=42;BaseQRankSum=-0.748;DP=174;FS=51.336;HRun=0;HaplotypeScore=35.9921;InbreedingCoeff=-0.0506;MQ=24.77;MQ0=62;MQRankSum=-4.825;QD=5.25;ReadPosRankSum=0.153;VQSLOD=0.4418;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:11:22.46:38,0,22	./.	./.	./.	./.	0/0:3,0:3:6.01:0,6,65	0/1:9,0:5:2.80:3,0,74	0/1:16,2:11:8.17:135,0,8	0/0:2,0:1:0:0,0,0	0/1:10,1:6:9.08:125,0,9	0/1:7,1:5:8.23:8,0,23	0/1:5,0:3:0.02:0,0,0	1/1:5,0:2:4.59:16,5,0	0/0:3,0:1:0:0,0,0	1/1:5,2:5:11.90:116,12,0	1/1:4,0:2:5.88:36,6,0	1/1:13,1:8:1.47:96,1,0	0/1:3,0:3:14.04:17,0,14	./.	1/1:3,2:2:6.02:88,6,0	0/1:13,2:7:7.42:7,0,52	0/0:2,0:2:2.96:0,3,19	./.	1/1:8,0:3:2.79:16,3,0	1/1:2,0:2:5.90:37,6,0	0/1:7,2:6:26.94:87,0,27	./.	1/1:3,0:1:2.96:19,3,0
chr10	81114896	.	AT	A	1702.23	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.738;DP=531;FS=1.949;HRun=1;HaplotypeScore=46.1927;InbreedingCoeff=0.9984;MQ=76.11;MQ0=0;MQRankSum=-0.770;QD=31.52;ReadPosRankSum=2.550;VQSLOD=3.3886;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:24.08:335,24,0	0/0:13,0:13:39.12:0,39,597	0/0:12,0:12:36.05:0,36,525	0/0:12,0:12:30.07:0,30,453	0/0:25,0:24:75.26:0,75,1196	0/0:21,0:20:63.21:0,63,1000	0/0:15,0:15:45.14:0,45,696	0/0:36,0:36:99:0,108,1580	0/0:20,0:20:60.20:0,60,958	0/0:33,0:33:99:0,99,1542	0/0:15,0:15:45.14:0,45,693	0/0:14,0:14:42.13:0,42,645	1/1:0,22:22:51.17:713,51,0	1/1:0,22:22:57.19:797,57,0	0/0:15,0:15:45.14:0,45,696	0/0:24,0:24:72.25:0,72,1146	0/0:17,0:17:48.14:0,48,740	0/0:14,0:14:42.11:0,42,644	0/0:12,0:12:36.12:0,36,569	0/0:30,0:30:90.29:0,90,1410	0/0:12,0:12:33.11:0,33,521	0/0:16,0:16:48.16:0,48,764	0/0:26,0:26:75.26:0,75,1193	0/0:11,0:11:33.11:0,33,525	0/0:19,0:18:57.19:0,57,908	0/0:28,0:28:84.29:0,84,1338	0/0:27,0:27:81.23:0,81,1219	0/0:10,0:10:27.09:0,27,423
chr10	81115516	.	CA	C	6125.33	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.646;DP=683;FS=1.499;HRun=1;HaplotypeScore=62.3810;InbreedingCoeff=0.9995;MQ=84.79;MQ0=0;MQRankSum=-0.696;QD=40.30;ReadPosRankSum=3.531;VQSLOD=5.5067;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.24:0,69,1103	0/0:11,0:11:33.10:0,33,505	0/0:17,0:17:49.41:0,49,754	0/0:25,0:25:72.21:0,72,1109	0/0:40,0:40:99:0,120,1917	1/1:0,38:38:99:1510,108,0	0/0:22,0:22:66.23:0,66,1055	0/0:40,0:40:99:0,120,1896	1/1:0,27:27:78.26:1091,78,0	0/0:31,0:31:93.31:0,93,1467	0/0:30,0:30:87.25:0,87,1363	1/1:0,25:25:69.23:965,69,0	0/0:17,0:17:51.15:0,51,790	0/0:22,0:22:66.21:0,66,1030	0/0:27,0:27:81.26:0,81,1267	0/0:21,0:21:63.20:0,63,982	0/0:18,0:18:54.15:0,54,836	0/0:18,0:18:51.17:0,51,815	0/0:18,0:18:54.18:0,54,864	0/0:39,0:39:99:0,117,1845	0/0:17,0:17:51.17:0,51,815	1/1:0,20:20:60.20:839,60,0	1/1:0,22:22:63.21:881,63,0	1/1:0,20:20:60.20:839,60,0	0/0:31,0:31:93.30:0,93,1462	0/0:29,0:29:84.28:0,84,1322	0/0:26,0:26:78.27:0,78,1247	0/0:8,0:8:24.08:0,24,384
chr10	81117427	.	C	CA	7609.98	PASS	AC=50;AF=1.000;AN=50;BaseQRankSum=-1.732;DP=466;FS=0.000;HRun=1;HaplotypeScore=335.7935;InbreedingCoeff=0.0113;MQ=30.95;MQ0=0;MQRankSum=-1.732;QD=16.91;ReadPosRankSum=1.719;VQSLOD=3.7324;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:42:84.99:556,85,0	1/1:1,10:11:11.42:101,11,0	./.	./.	1/1:0,17:17:14.97:122,15,0	1/1:3,15:18:38.21:275,38,0	1/1:0,7:7:15.31:100,15,0	1/1:1,26:27:80.30:1093,80,0	1/1:0,14:14:20.35:137,20,0	1/1:1,22:23:57.62:772,58,0	1/1:3,13:16:35.33:226,35,0	1/1:1,21:22:14.19:101,14,0	1/1:1,26:27:41.45:367,41,0	1/1:2,18:20:11.56:102,12,0	1/1:0,17:17:23.37:179,23,0	./.	1/1:1,6:7:14.90:159,15,0	1/1:0,6:6:11.78:146,12,0	1/1:0,11:11:27.09:379,27,0	1/1:1,29:30:55.02:381,55,0	1/1:0,14:14:14.39:142,14,0	1/1:0,24:24:38:293,38,0	1/1:4,12:17:23.18:150,23,0	1/1:0,10:10:2.85:18,3,0	1/1:1,13:14:26.39:175,26,0	1/1:2,19:21:58.38:807,58,0	1/1:0,29:27:54.81:580,55,0	1/1:0,6:6:18.06:249,18,0
chr10	81118220	.	AG	A	21131.54	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=5.313;DP=688;FS=0.000;HRun=2;HaplotypeScore=116.5791;InbreedingCoeff=0.9984;MQ=60.36;MQ0=0;MQRankSum=-7.614;QD=34.81;ReadPosRankSum=5.688;VQSLOD=4.1845;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:58.65:705,59,0	1/1:1,12:13:33.02:390,33,0	0/0:37,0:37:99:0,105,1488	0/0:28,0:28:81.23:0,81,1155	1/1:3,16:19:50.99:587,51,0	1/1:1,27:28:84.04:992,84,0	0/0:16,0:16:45.14:0,45,654	1/1:0,30:30:90.24:1111,90,0	1/1:3,34:37:99:1380,111,0	1/1:3,25:28:84.26:1066,84,0	1/1:1,19:20:50.83:544,51,0	1/1:2,27:29:87.09:1035,87,0	1/1:2,22:24:69.17:862,69,0	1/1:2,27:29:84.26:1077,84,0	1/1:2,21:23:69.22:893,69,0	1/1:2,21:23:69.12:845,69,0	1/1:3,22:25:72.19:902,72,0	1/1:3,14:17:42.07:509,42,0	1/1:2,16:18:54.15:675,54,0	1/1:2,29:31:83.96:971,84,0	1/1:0,22:22:63.20:818,63,0	1/1:1,21:22:59.99:686,60,0	1/1:1,26:27:69.07:836,69,0	1/1:0,17:17:42.14:545,42,0	1/1:2,27:29:81.18:1013,81,0	1/1:3,25:28:73.30:1030,73,0	1/1:4,35:39:99:1386,111,0	1/1:0,7:7:21.07:272,21,0
chr10	81118281	.	AC	A	10839.45	PASS	AB=1.000;AC=55;AF=0.982;AN=56;BaseQRankSum=0.270;DP=717;FS=5.454;HRun=3;HaplotypeScore=204.8362;InbreedingCoeff=-0.0221;MQ=54.20;MQ0=0;MQRankSum=0.236;QD=15.12;ReadPosRankSum=7.213;VQSLOD=4.1507;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:7,16:23:14.75:111,15,0	1/1:10,0:10:2.94:116,3,0	1/1:18,0:17:38.48:218,38,0	0/1:16,0:15:4.82:133,0,5	1/1:25,0:25:39.65:374,40,0	1/1:37,0:37:85.67:620,86,0	1/1:12,0:12:11.85:149,12,0	1/1:44,0:44:99:566,111,0	1/1:31,0:31:81.63:533,82,0	1/1:38,0:38:99:586,109,0	1/1:25,0:25:64.66:424,65,0	1/1:28,0:28:39.52:429,40,0	1/1:20,0:20:54.13:317,54,0	1/1:19,0:19:52.76:329,53,0	1/1:18,0:18:32.70:277,33,0	1/1:23,0:23:64.27:401,64,0	1/1:27,0:27:73.37:465,73,0	1/1:27,0:27:62.13:434,62,0	1/1:26,0:26:45.56:365,46,0	1/1:47,0:47:99:782,125,0	1/1:19,0:19:47.66:283,48,0	1/1:35,0:35:70.65:556,71,0	1/1:27,0:27:64.56:414,65,0	1/1:14,0:14:15.38:196,15,0	1/1:26,0:26:67.21:405,67,0	1/1:26,0:26:71.88:424,72,0	1/1:41,0:41:82.77:650,83,0	1/1:15,0:15:44.26:284,44,0
chr10	81120208	.	C	CACA	40465.68	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-5.961;DP=809;FS=5.707;HRun=0;HaplotypeScore=120.1101;InbreedingCoeff=0.9967;MQ=82.61;MQ0=0;MQRankSum=-9.661;QD=55.81;ReadPosRankSum=6.895;VQSLOD=6.2490;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:36:87.30:1942,87,0	1/1:1,7:9:18.02:402,18,0	0/0:30,0:30:69.24:0,69,1194	0/0:25,0:25:63.21:0,63,1001	1/1:8,28:37:81.28:1808,81,0	1/1:2,26:30:78.27:1742,78,0	0/0:29,0:29:81.25:0,81,1274	1/1:9,27:40:99:2033,99,0	1/1:6,22:28:66.23:1472,66,0	1/1:1,25:26:78.27:1736,78,0	1/1:3,18:21:54.14:1152,54,0	1/1:4,27:33:78.27:1741,78,0	1/1:3,40:44:99:2583,117,0	1/1:1,32:34:90.31:2008,90,0	1/1:2,33:37:84.29:1846,84,0	1/1:2,36:39:99:2366,108,0	1/1:4,24:29:66.23:1474,66,0	1/1:1,9:11:30.10:617,30,0	1/1:4,24:30:81.28:1726,81,0	1/1:4,20:25:57.15:1225,57,0	1/1:6,20:26:60.21:1340,60,0	1/1:3,28:31:84.29:1876,84,0	1/1:1,22:24:66.23:1472,66,0	1/1:5,17:23:48.16:1072,48,0	1/1:0,26:26:69.24:1540,69,0	1/1:2,37:39:99:2462,111,0	1/1:2,35:36:99:2161,99,0	1/1:0,10:10:30.10:670,30,0
chr10	81121058	.	GA	G	3793.90	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.567;DP=581;FS=2.351;HRun=1;HaplotypeScore=91.7754;InbreedingCoeff=0.9988;MQ=87.73;MQ0=0;MQRankSum=-3.064;QD=35.13;ReadPosRankSum=3.196;VQSLOD=3.8483;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.14:0,42,603	0/0:17,0:17:51.17:0,51,813	0/0:22,0:22:66.16:0,66,983	0/0:19,0:19:42.13:0,42,702	0/0:29,0:29:87.28:0,87,1356	1/1:0,21:21:54.18:700,54,0	0/0:9,0:9:27.06:0,27,384	0/0:31,0:31:93.31:0,93,1451	1/1:0,15:15:39.13:506,39,0	0/0:30,0:30:90.31:0,90,1418	0/0:24,0:24:72.24:0,72,1131	1/1:0,21:21:60.19:776,60,0	0/0:23,0:23:68.90:0,69,973	0/0:23,0:23:66.19:0,66,897	0/0:24,0:24:72.25:0,72,1141	0/0:22,0:22:66.22:0,66,1039	0/0:22,0:22:66.22:0,66,1040	0/0:9,0:9:21.07:0,21,308	0/0:15,0:15:45.15:0,45,719	0/0:28,0:28:84.28:0,84,1324	0/0:15,0:15:45.14:0,45,695	1/1:4,14:18:51.05:607,51,0	1/1:0,21:21:60.20:778,60,0	1/1:0,12:12:33.11:428,33,0	0/0:26,0:26:75.26:0,75,1195	0/0:22,0:22:66.23:0,66,1054	0/0:36,0:35:99:0,108,1675	0/0:11,0:11:33.11:0,33,528
chr10	81121060	.	C	CT	3226.07	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=5.995;DP=593;FS=0.724;HRun=6;HaplotypeScore=95.3912;InbreedingCoeff=0.9971;MQ=87.29;MQ0=0;MQRankSum=-0.492;QD=18.33;ReadPosRankSum=2.726;VQSLOD=3.1386;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:39.08:473,39,0	0/0:17,0:17:48.09:0,48,483	0/0:22,0:23:59.16:0,59,586	0/0:18,0:18:45.06:0,45,446	0/0:29,0:29:81.18:0,81,826	1/1:22,0:22:54.65:304,55,0	0/0:8,0:8:24.05:0,24,244	0/0:32,0:32:90.18:0,90,908	1/1:16,0:16:40.69:235,41,0	0/0:31,0:31:75.15:0,75,761	0/0:25,0:25:69.14:0,69,697	1/1:22,0:22:57.06:307,57,0	1/1:5,19:24:57.18:717,57,0	1/1:3,19:22:57.18:708,57,0	0/0:24,0:24:66.14:0,66,667	0/0:21,0:21:57.13:0,57,582	0/0:22,0:22:63.14:0,63,643	0/0:9,0:9:15.03:0,15,153	0/0:15,0:15:45.10:0,45,459	0/0:30,0:30:84.17:0,84,850	0/0:16,0:16:45.10:0,45,459	1/1:17,0:17:40.81:218,41,0	1/1:21,0:21:57.50:311,58,0	1/1:13,0:13:31.68:170,32,0	0/0:25,0:25:69.16:0,69,704	0/0:24,0:24:63.14:0,63,643	0/0:37,0:36:87.18:0,87,887	0/0:11,0:11:33.08:0,33,337
chr10	81121257	.	GA	G	10847.09	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=11.318;DP=521;FS=0.000;HRun=8;HaplotypeScore=93.2945;InbreedingCoeff=0.9902;MQ=83.94;MQ0=0;MQRankSum=-2.305;QD=25.28;ReadPosRankSum=2.861;VQSLOD=5.1303;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.13:0,48,567	1/1:3,8:11:24.04:232,24,0	0/0:15,0:15:30.06:0,30,347	0/0:15,0:15:19.39:0,19,334	1/1:4,17:21:54.08:521,54,0	1/1:2,26:28:75.12:724,75,0	0/0:12,0:12:30.09:0,30,362	1/1:4,28:32:84.13:811,84,0	1/1:1,14:15:36.06:348,36,0	1/1:2,34:36:99:956,99,0	1/1:4,18:22:57.09:550,57,0	1/1:2,12:14:33.05:319,33,0	0/0:14,0:14:39.12:0,39,471	0/0:19,0:19:54.15:0,54,640	1/1:1,21:22:60.10:579,60,0	1/1:2,17:19:51.08:493,51,0	1/1:1,13:14:39.06:377,39,0	1/1:2,7:10:23.07:209,23,0	1/1:1,13:14:39.06:377,39,0	1/1:6,25:31:78.12:753,78,0	1/1:2,9:11:27.04:261,27,0	1/1:3,23:26:69.11:666,69,0	1/1:2,20:23:62.13:585,62,0	1/1:2,6:8:21.03:203,21,0	1/1:4,12:16:39.06:377,39,0	1/1:2,20:22:60.09:580,60,0	1/1:2,28:30:84.13:811,84,0	1/1:0,4:4:12.02:116,12,0
chr10	81121355	.	A	AG	17914.99	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-1.044;DP=553;FS=6.293;HRun=1;HaplotypeScore=68.5447;InbreedingCoeff=0.9947;MQ=89.59;MQ0=0;MQRankSum=-4.485;QD=40.26;ReadPosRankSum=2.816;VQSLOD=5.5435;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.19:0,66,840	1/1:0,13:13:33.11:494,33,0	0/0:22,0:23:39.13:0,39,773	0/0:20,0:20:54.16:0,54,674	1/1:0,32:32:87.29:1303,87,0	1/1:1,23:24:57.19:854,57,0	0/0:12,0:12:36.10:0,36,453	1/1:1,29:30:84.24:1199,84,0	1/1:1,8:9:24.08:359,24,0	1/1:5,14:19:46.40:738,46,0	1/1:0,25:25:72.19:1050,72,0	1/1:0,22:22:54.18:809,54,0	0/0:17,0:17:50.89:0,51,622	0/0:14,0:14:42.12:0,42,530	1/1:1,11:12:30.10:450,30,0	1/1:0,16:16:48.16:719,48,0	1/1:2,17:19:15.38:724,15,0	1/1:1,15:16:35.10:619,35,0	1/1:2,23:25:46.69:981,47,0	1/1:1,28:29:81.27:1213,81,0	1/1:0,14:14:39.13:584,39,0	1/1:2,16:18:45.15:666,45,0	1/1:2,21:23:66.22:976,66,0	1/1:0,15:15:42.14:629,42,0	1/1:0,18:18:48.16:719,48,0	1/1:0,25:25:75.25:1120,75,0	1/1:2,33:35:96.33:1438,96,0	1/1:0,6:6:18.06:270,18,0
chr10	81122189	.	TG	T	3947.03	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-0.735;DP=560;FS=0.894;HRun=2;HaplotypeScore=89.7611;InbreedingCoeff=0.9125;MQ=65.53;MQ0=4;MQRankSum=-1.198;QD=10.55;ReadPosRankSum=-0.633;VQSLOD=1.3943;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:28:30.54:211,31,0	1/1:3,1:4:11.75:102,12,0	0/0:33,1:19:10.88:0,11,413	0/0:25,1:13:27.39:0,27,213	1/1:32,0:31:64.50:375,65,0	0/0:26,0:26:45.59:0,46,372	0/0:28,0:27:38.23:0,38,752	1/1:27,0:25:36.37:261,36,0	0/0:17,0:16:43.89:0,44,469	1/1:23,0:23:31.86:233,32,0	1/1:19,0:18:13.23:152,13,0	0/0:15,0:15:14.72:0,15,106	1/1:18,0:17:12.90:79,13,0	1/1:14,0:14:13.17:93,13,0	1/1:21,0:22:44.63:289,45,0	1/1:27,0:26:28.11:185,28,0	1/1:19,1:19:32.14:205,32,0	1/1:10,0:10:22.76:147,23,0	1/1:16,0:15:29.49:217,29,0	1/1:20,0:20:48.71:302,49,0	1/1:1,7:8:2.05:36,2,0	0/0:13,0:13:30.29:0,30,294	0/0:15,0:15:27.20:0,27,239	0/0:12,0:12:2.78:0,3,28	1/1:26,0:25:46.33:272,46,0	1/1:22,0:22:53.62:297,54,0	1/1:28,1:28:58.80:386,59,0	1/1:6,0:6:17.27:106,17,0
chr10	81122190	.	G	GT	1779.95	PASS	AB=0.877;AC=25;AF=0.446;AN=56;BaseQRankSum=0.978;DP=563;FS=2.667;HRun=5;HaplotypeScore=97.8545;InbreedingCoeff=0.3436;MQ=65.52;MQ0=5;MQRankSum=-0.467;QD=5.07;ReadPosRankSum=-0.208;VQSLOD=-0.3848;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:1.44:34,1,0	0/1:3,1:4:0.95:19,0,1	0/0:35,0:20:23.33:0,23,493	0/0:26,0:12:24.75:0,25,284	1/1:22,10:31:14.59:310,15,0	0/0:27,0:27:45.32:0,45,420	0/0:28,0:27:70.21:0,70,872	0/1:26,1:26:17.77:18,0,45	0/0:16,0:15:45.05:0,45,510	0/1:21,3:24:13.75:92,0,14	0/1:15,2:17:16.38:110,0,16	0/0:15,0:15:14.62:0,15,110	1/1:17,0:17:9.50:57,9,0	0/0:15,0:14:1.86:0,2,6	0/1:23,0:22:1.05:35,0,1	1/1:10,17:26:5.50:87,5,0	1/1:15,3:17:11.87:162,12,0	0/1:10,0:10:0.81:39,0,1	0/1:13,2:15:7.25:86,0,7	1/1:15,6:21:31.05:254,31,0	0/0:8,0:8:3.37:0,3,9	0/0:14,0:14:27.19:0,27,319	0/0:16,0:16:29.68:0,30,291	0/0:12,0:12:2.56:0,3,23	1/1:21,4:25:8.38:173,8,0	1/1:6,16:22:15.78:258,16,0	0/1:25,3:27:11.01:187,0,11	0/1:4,4:8:6.46:41,0,6
chr10	81122191	.	G	GTTT	5267.14	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-0.266;DP=579;FS=38.005;HRun=14;HaplotypeScore=110.7059;InbreedingCoeff=0.2817;MQ=65.43;MQ0=6;MQRankSum=-0.293;QD=9.72;ReadPosRankSum=-0.689;VQSLOD=-0.5360;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:27:52.42:356,52,0	0/1:4,0:4:1.17:1,0,16	0/1:37,0:21:39.36:39,0,71	0/1:28,0:12:4.20:4,0,47	1/1:32,0:31:21.42:331,21,0	1/1:5,19:30:36.54:506,37,0	0/0:27,0:28:45.88:0,46,445	0/1:29,0:27:66.28:66,0,72	1/1:15,1:16:36:386,36,0	1/1:22,0:23:11.78:171,12,0	1/1:18,0:17:27.11:262,27,0	1/1:1,12:15:12.04:199,12,0	1/1:17,0:16:21.50:129,21,0	1/1:15,0:14:20.62:116,21,0	1/1:23,0:22:40.80:485,41,0	1/1:27,0:26:14.44:74,14,0	1/1:18,0:17:11.31:219,11,0	0/1:9,0:9:1.05:70,0,1	0/1:16,0:15:27.16:84,0,27	1/1:21,0:21:41.12:258,41,0	0/0:8,0:8:2.81:0,3,21	1/1:2,11:16:23.95:305,24,0	1/1:5,12:21:23.83:284,24,0	1/1:0,12:13:3.01:53,3,0	1/1:27,0:26:43.60:253,44,0	1/1:22,0:22:24.97:332,25,0	0/1:28,0:27:0.51:232,0,1	1/1:8,0:8:10.19:53,10,0
chr10	81124956	.	AT	A	11454.98	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=10.038;DP=482;FS=3.683;HRun=2;HaplotypeScore=59.3888;InbreedingCoeff=0.9830;MQ=76.10;MQ0=0;MQRankSum=-2.443;QD=31.04;ReadPosRankSum=2.184;VQSLOD=4.5207;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:81.26:1048,81,0	1/1:0,5:5:9.03:117,9,0	0/0:17,0:15:41.49:0,41,451	0/0:7,0:7:14.95:0,15,156	1/1:0,33:33:90.07:1087,90,0	0/0:20,0:20:60.17:0,60,851	0/0:6,0:6:18.06:0,18,269	1/1:0,23:23:66.10:765,66,0	0/0:11,0:11:33.10:0,33,473	1/1:1,26:27:71.59:920,72,0	1/1:0,17:17:48.11:602,48,0	0/0:18,0:18:54.17:0,54,781	1/1:1,15:16:38.92:486,39,0	1/1:0,19:19:45.15:583,45,0	1/1:0,23:23:54.18:699,54,0	1/1:0,15:15:30.10:388,30,0	1/1:0,14:14:30.10:388,30,0	1/1:3,17:20:33.11:425,33,0	1/1:0,17:17:51.08:612,51,0	1/1:0,24:23:62.90:714,63,0	1/1:0,12:12:30.10:388,30,0	0/0:12,0:12:36.11:0,36,519	0/0:16,0:16:48.16:0,48,708	0/0:6,0:6:15.05:0,15,224	1/1:2,18:20:48.16:622,48,0	1/1:0,18:18:54.12:642,54,0	1/1:0,27:27:57.19:737,57,0	1/1:0,6:6:18.06:233,18,0
chr10	81126370	.	GA	G	8648.36	PASS	AB=0.694;AC=43;AF=0.768;AN=56;BaseQRankSum=4.307;DP=611;FS=2.151;HRun=11;HaplotypeScore=116.3323;InbreedingCoeff=0.7865;MQ=59.70;MQ0=5;MQRankSum=-2.227;QD=17.58;ReadPosRankSum=1.163;VQSLOD=4.5561;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,2:37:46.49:0,46,851	1/1:5,11:16:38.95:320,39,0	0/0:33,0:16:7.62:0,8,235	0/0:24,0:14:4.51:0,5,59	1/1:13,30:43:99:861,107,0	1/1:4,26:31:70.94:572,71,0	0/0:10,0:10:24.06:0,24,256	0/1:19,15:34:29.86:371,0,30	1/1:6,15:21:6.95:264,7,0	1/1:11,25:37:28.88:568,29,0	1/1:4,23:28:70.95:572,71,0	1/1:2,11:13:29.96:246,30,0	0/0:9,0:9:2.76:0,3,231	0/0:6,0:6:12.03:0,12,126	1/1:6,11:17:32.91:265,33,0	1/1:3,16:19:47.82:376,48,0	1/1:6,14:21:55.11:420,55,0	1/1:9,10:19:36.91:275,37,0	1/1:4,14:19:43.97:350,44,0	1/1:11,17:29:38.99:490,39,0	1/1:3,4:7:17.95:144,18,0	1/1:5,22:27:56.90:467,57,0	1/1:6,23:29:53.87:443,54,0	1/1:1,13:14:32.96:271,33,0	1/1:4,12:17:43.98:350,44,0	1/1:4,21:26:38.97:513,39,0	1/1:5,15:20:50.89:413,51,0	1/1:1,4:5:11.98:98,12,0
chr10	81126408	.	GC	G	11778.03	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=14.823;DP=624;FS=3.129;HRun=3;HaplotypeScore=122.7703;InbreedingCoeff=0.9784;MQ=56.74;MQ0=0;MQRankSum=-4.644;QD=32.36;ReadPosRankSum=0.209;VQSLOD=3.9987;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1697	1/1:0,15:15:45.14:557,45,0	0/0:28,0:17:37.56:0,38,544	0/0:29,0:22:57.02:0,57,779	1/1:4,28:32:78.21:939,78,0	0/0:22,0:22:60.20:0,60,863	0/0:15,0:15:39.13:0,39,562	1/1:6,24:30:75.15:928,75,0	0/0:16,0:16:48.16:0,48,691	1/1:3,25:28:81.17:978,81,0	1/1:2,28:30:84.26:1039,84,0	0/0:16,0:16:48.16:0,48,687	0/0:11,0:11:30.10:0,30,432	0/0:9,0:9:27.09:0,27,388	1/1:1,16:17:6.57:516,7,0	1/1:1,19:20:51.16:631,51,0	1/1:4,21:25:18.37:664,18,0	1/1:2,20:22:14.06:626,14,0	1/1:0,25:25:69.17:838,69,0	1/1:1,40:41:99:1374,111,0	1/1:1,6:7:12.04:148,12,0	0/0:27,0:27:78.25:0,78,1101	0/0:29,0:29:77.94:0,78,1102	0/0:16,0:16:45.11:0,45,625	1/1:0,17:17:51.16:632,51,0	1/1:2,22:24:66.20:807,66,0	1/1:2,20:22:63.18:767,63,0	1/1:0,9:9:27.08:335,27,0
chr10	81126592	.	AGC	A	2888.11	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.766;DP=719;FS=1.625;HRun=0;HaplotypeScore=103.0678;InbreedingCoeff=0.9971;MQ=57.48;MQ0=6;MQRankSum=6.348;QD=39.03;ReadPosRankSum=0.131;VQSLOD=5.5615;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:32:84.29:1368,84,0	0/0:6,0:6:18.06:0,18,365	0/0:31,0:15:44.82:0,45,864	0/0:34,0:22:62.81:0,63,1205	0/0:39,0:39:99:0,114,2238	0/0:27,0:27:78.27:0,78,1584	0/0:13,0:13:39.13:0,39,792	0/0:37,0:34:99:0,99,1991	0/0:20,0:20:60.21:0,60,1219	0/0:33,0:32:96.32:0,96,1877	0/0:24,0:24:69.24:0,69,1400	0/0:21,0:21:63.19:0,63,1210	1/1:0,21:21:57.19:929,57,0	1/1:0,20:19:45.15:734,45,0	0/0:21,0:21:63.22:0,63,1279	0/0:23,0:23:63.22:0,63,1240	0/0:33,0:33:93.32:0,93,1887	0/0:34,0:34:93.32:0,93,1888	0/0:24,0:21:63.21:0,63,1230	0/0:35,0:35:99:0,105,2025	0/0:15,0:15:42.14:0,42,853	0/0:30,0:30:90.30:0,90,1793	0/0:22,0:22:66.23:0,66,1339	0/0:20,0:20:57.20:0,57,1157	0/0:16,0:16:48.16:0,48,975	0/0:27,0:27:81.28:0,81,1631	0/0:34,0:34:99:0,102,2065	0/0:25,0:24:72.25:0,72,1462
chr10	81128252	.	GCAAC	G	4420.15	PASS	AB=0.553;AC=11;AF=0.196;AN=56;BaseQRankSum=-8.874;DP=559;FS=3.253;HRun=0;HaplotypeScore=133.2333;InbreedingCoeff=0.8835;MQ=57.38;MQ0=0;MQRankSum=1.001;QD=40.93;ReadPosRankSum=3.765;VQSLOD=5.4392;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.24:0,75,1894	0/0:10,0:10:30.10:0,30,774	0/0:13,0:8:15.05:0,15,379	0/0:26,0:23:65.03:0,65,1544	0/0:33,0:33:96.33:0,96,2423	1/1:0,26:26:63.22:1132,63,0	0/0:12,0:12:36.11:0,36,881	0/0:34,0:34:90.29:0,90,2065	0/1:4,17:21:23.36:862,0,23	0/0:19,0:19:57.20:0,57,1466	0/0:27,0:27:72.25:0,72,1784	1/1:2,11:13:33.11:593,33,0	0/0:19,0:19:48.16:0,48,1223	0/0:14,0:14:39.13:0,39,1010	0/0:17,0:17:48.16:0,48,1216	0/0:15,0:15:42.14:0,42,1068	0/0:22,0:22:60.19:0,60,1442	0/0:11,0:11:26.94:0,27,728	0/0:17,0:15:39.13:0,39,1004	0/0:29,0:29:84.29:0,84,2049	0/0:20,0:20:57.20:0,57,1429	1/1:0,18:18:39.13:701,39,0	1/1:2,17:19:36.10:647,36,0	1/1:1,10:11:27.09:485,27,0	0/0:23,0:22:60.20:0,60,1500	0/0:30,0:30:90.31:0,90,2259	0/0:17,0:17:51.18:0,51,1317	0/0:16,0:16:42.14:0,42,1080
chr10	81128521	.	C	CAA	16990.21	PASS	AB=0.520;AC=31;AF=0.554;AN=56;BaseQRankSum=-15.520;DP=590;FS=5.008;HRun=4;HaplotypeScore=60.6205;InbreedingCoeff=0.9459;MQ=58.83;MQ0=4;MQRankSum=1.750;QD=48.41;ReadPosRankSum=-0.598;VQSLOD=3.5043;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:39.13:0,39,516	1/1:0,6:6:18.06:324,18,0	0/0:25,0:15:25.57:0,26,406	0/0:25,0:14:33.11:0,33,429	1/1:1,32:33:96.28:1637,96,0	0/0:16,0:16:45.15:0,45,600	0/0:19,0:19:54.16:0,54,705	1/1:0,27:27:78.27:1405,78,0	0/0:23,0:23:69.23:0,69,921	1/1:3,36:39:99:1929,108,0	1/1:1,29:30:84.20:1416,84,0	0/0:20,0:20:60.20:0,60,800	0/0:23,0:23:66.22:0,66,880	0/0:17,0:17:45.15:0,45,600	1/1:0,15:16:45.15:811,45,0	1/1:2,21:24:54.19:971,54,0	0/1:1,12:13:3.83:558,0,4	1/1:1,12:13:36.12:640,36,0	1/1:2,16:18:48.16:862,48,0	1/1:2,25:27:75.22:1259,75,0	1/1:0,14:14:33.11:595,33,0	0/0:15,0:15:33.10:0,33,440	0/0:29,0:29:78.24:0,78,1024	0/0:8,0:8:18.06:0,18,240	1/1:0,17:17:48.16:865,48,0	1/1:1,30:31:93.27:1611,93,0	1/1:0,33:34:93.32:1675,93,0	1/1:1,8:8:24.08:432,24,0
chr10	81128606	.	C	CAA	36.98	PASS	AB=0.974;AC=8;AF=0.143;AN=56;BaseQRankSum=3.616;DP=536;FS=8.672;HRun=4;HaplotypeScore=130.4318;InbreedingCoeff=0.4003;MQ=77.65;MQ0=2;MQRankSum=-5.809;QD=0.35;ReadPosRankSum=-2.421;VQSLOD=-0.6308;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:7.36:37,7,0	0/0:10,0:10:16.68:0,17,81	0/0:30,0:27:55.77:0,56,649	0/0:22,1:20:29.26:0,29,261	0/0:32,0:32:41.95:0,42,338	0/0:17,0:17:46.54:0,47,469	0/0:11,0:12:33.07:0,33,405	0/0:31,0:31:61.61:0,62,418	0/0:11,0:11:18.50:0,19,197	0/0:28,1:29:47.70:0,48,375	0/0:36,0:36:34.49:0,34,348	0/0:17,0:17:29.94:0,30,176	1/1:11,0:11:13.31:54,13,0	0/1:13,0:13:5.78:47,0,6	0/0:18,0:17:14.83:0,15,143	0/1:28,1:29:2.59:3,0,156	0/0:23,0:23:15.09:0,15,138	0/0:9,0:9:8.60:0,9,65	0/1:12,1:13:13.96:14,0,93	0/0:23,0:23:37.12:0,37,215	0/0:10,0:10:9.88:0,10,60	0/0:17,0:17:28.31:0,28,210	0/0:17,0:17:12.93:0,13,86	0/0:9,0:9:7.34:0,7,78	0/0:21,0:21:20.18:0,20,148	0/0:21,0:21:18.64:0,19,138	0/1:24,0:24:14.83:15,0,183	0/0:15,0:15:9.46:0,9,150
chr10	81128611	.	T	TAA	13991.48	PASS	AB=0.632;AC=49;AF=0.875;AN=56;BaseQRankSum=-6.571;DP=552;FS=6.953;HRun=10;HaplotypeScore=83.0717;InbreedingCoeff=0.8659;MQ=78.72;MQ0=3;MQRankSum=-4.802;QD=28.85;ReadPosRankSum=1.799;VQSLOD=4.9900;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:17:16.54:134,17,0	1/1:2,8:10:27.09:402,27,0	0/0:31,0:28:21.38:0,21,336	0/0:23,0:20:24.25:0,24,203	1/1:9,16:27:56.65:755,57,0	1/1:0,2:19:40.83:212,41,0	0/0:11,0:11:23.77:0,24,226	1/1:7,23:33:75.04:994,75,0	1/1:4,7:11:15.05:224,15,0	1/1:13,17:32:74.07:933,74,0	1/1:13,26:39:95.76:1318,96,0	1/1:3,13:17:38.62:545,39,0	1/1:1,0:12:15.01:134,15,0	1/1:0,0:14:18.01:162,18,0	1/1:4,13:17:41.62:572,42,0	1/1:10,21:31:78.24:1115,78,0	1/1:5,16:22:32.69:831,33,0	1/1:2,6:9:21.06:296,21,0	1/1:9,3:13:33.52:372,34,0	1/1:8,14:24:58.05:799,58,0	1/1:3,2:7:13.56:134,14,0	1/1:3,14:20:47.09:619,47,0	0/1:5,7:12:2.17:316,0,2	1/1:0,7:9:20.55:261,21,0	1/1:9,16:25:66.14:918,66,0	1/1:1,21:25:67.87:854,68,0	1/1:11,10:22:46.11:586,46,0	1/1:8,8:17:38.58:504,39,0
chr10	81128893	.	GAC	G	12871.27	PASS	AB=0.560;AC=29;AF=0.518;AN=56;BaseQRankSum=11.137;DP=600;FS=5.245;HRun=0;HaplotypeScore=73.1182;InbreedingCoeff=0.7777;MQ=56.13;MQ0=9;MQRankSum=2.439;QD=39.97;ReadPosRankSum=2.738;VQSLOD=6.7519;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.30:0,93,1734	0/1:1,9:10:27.45:383,0,27	0/0:23,0:8:24.05:0,24,411	0/0:25,0:13:32.28:0,32,642	1/1:0,22:22:63.21:965,63,0	0/0:31,0:31:93.32:0,93,1794	0/0:17,0:16:48.15:0,48,894	1/1:4,15:19:39.13:593,39,0	0/0:18,0:18:54.19:0,54,1032	1/1:1,30:31:90.29:1347,90,0	1/1:0,28:28:75.25:1148,75,0	0/0:22,0:22:66.23:0,66,1255	0/0:20,0:20:57.19:0,57,1071	0/0:20,0:20:60.21:0,60,1145	1/1:0,21:21:60.20:919,60,0	1/1:0,17:17:45.15:689,45,0	1/1:0,16:16:42.14:639,42,0	0/1:6,11:17:68.76:478,0,69	1/1:1,24:23:8.22:880,8,0	1/1:0,22:22:60.20:919,60,0	1/1:0,23:23:60.20:919,60,0	0/0:24,0:24:72.25:0,72,1370	0/0:23,0:23:66.21:0,66,1239	0/0:23,0:23:66.23:0,66,1272	1/1:0,25:24:69.23:1055,69,0	1/1:0,18:18:54.13:762,54,0	1/1:0,21:21:63.21:965,63,0	0/1:1,5:6:15.87:212,0,16
chr10	81129413	.	CA	C	1927.70	PASS	AB=0.990;AC=27;AF=0.482;AN=56;BaseQRankSum=7.257;DP=468;FS=16.225;HRun=7;HaplotypeScore=99.4556;InbreedingCoeff=0.6452;MQ=46.98;MQ0=7;MQRankSum=-7.605;QD=7.22;ReadPosRankSum=-2.655;VQSLOD=-0.1876;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:51.16:0,51,640	1/1:8,2:10:18.98:101,19,0	0/0:25,0:7:6.98:0,7,107	0/0:22,1:12:20.81:0,21,243	1/1:20,2:21:21.11:184,21,0	0/0:19,0:18:54.08:0,54,627	0/0:16,0:16:42.13:0,42,525	0/1:24,0:21:25.95:189,0,26	0/0:11,0:11:27.07:0,27,319	1/1:22,1:23:42.41:308,42,0	1/1:19,2:21:23.84:203,24,0	0/0:13,0:13:33.10:0,33,412	0/0:13,0:13:36.11:0,36,451	0/0:8,0:8:21.05:0,21,251	1/1:17,1:17:25.26:118,25,0	0/1:18,1:18:22.40:91,0,22	1/1:13,0:14:14.89:107,15,0	0/1:7,0:7:4.92:5,0,5	1/1:14,2:12:22.72:153,23,0	1/1:16,2:18:30.61:231,31,0	0/1:4,0:4:13.25:13,0,16	0/0:21,0:21:54.05:0,54,632	0/0:21,0:21:57.16:0,57,687	0/0:8,0:8:21.07:0,21,263	0/1:24,0:24:7.66:84,0,8	1/1:17,3:20:14.78:241,15,0	1/1:18,0:19:17.97:97,18,0	1/1:7,0:7:4.31:14,4,0
chr10	81129414	.	A	AAAAAAC	8220.20	PASS	AB=0.787;AC=29;AF=0.518;AN=56;BaseQRankSum=0.119;DP=482;FS=6.909;HRun=0;HaplotypeScore=121.3202;InbreedingCoeff=0.6548;MQ=48.54;MQ0=7;MQRankSum=-7.241;QD=26.95;ReadPosRankSum=-3.100;VQSLOD=3.6371;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:51.17:0,51,1025	1/1:5,6:11:21.34:469,21,0	0/1:27,0:6:14.09:14,0,98	0/0:26,0:13:21.07:0,21,285	1/1:10,13:22:38.42:769,38,0	0/0:19,0:18:54.08:0,54,995	0/0:16,0:16:42.14:0,42,907	0/1:24,0:21:23.20:513,0,23	0/0:11,0:11:27.07:0,27,495	1/1:10,15:25:56.52:886,57,0	1/1:11,8:21:41.84:656,42,0	0/0:14,0:14:33.11:0,33,692	0/0:13,0:13:36.12:0,36,741	0/0:8,0:8:21.06:0,21,423	1/1:10,6:18:30.29:682,30,0	0/1:9,8:19:38.95:510,0,39	1/1:13,1:14:24:502,24,0	0/1:4,3:7:4.65:88,0,5	1/1:16,0:12:27.72:377,28,0	1/1:10,11:21:35.01:570,35,0	1/1:4,0:4:9:134,9,0	0/0:20,0:20:54.18:0,54,1023	0/0:21,0:21:57.17:0,57,1020	0/0:8,0:8:21.07:0,21,468	0/1:7,16:23:4:575,0,4	1/1:9,11:20:23:794,23,0	1/1:8,7:21:13.20:530,13,0	1/1:2,6:8:5.91:151,6,0
chr10	81129415	.	A	AAAAAC	5446.96	PASS	AB=0.954;AC=20;AF=0.357;AN=56;BaseQRankSum=2.870;DP=477;FS=3.131;HRun=0;HaplotypeScore=120.5891;InbreedingCoeff=0.0896;MQ=48.38;MQ0=7;MQRankSum=-8.609;QD=18.04;ReadPosRankSum=1.497;VQSLOD=4.7672;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:54.17:0,54,992	1/1:11,0:11:13:314,13,0	0/1:26,0:5:3.86:4,0,110	0/0:27,0:13:21.53:0,22,314	1/1:23,0:21:26.53:560,27,0	0/0:19,0:18:54.17:0,54,975	0/0:16,0:16:42.14:0,42,834	0/1:26,0:23:99:305,0,127	0/0:11,0:11:27.08:0,27,481	0/1:21,1:22:44.67:499,0,45	0/1:20,1:21:0.09:430,0,0	0/0:14,0:14:36.11:0,36,667	0/0:13,0:13:39.12:0,39,725	0/0:7,0:7:21.06:0,21,392	0/1:16,3:18:4.71:519,0,5	0/1:20,0:19:32.27:302,0,32	1/1:13,1:14:3.24:291,3,0	0/1:5,0:6:2.77:54,0,3	0/1:16,2:14:7.34:350,0,7	0/1:21,0:21:34.11:354,0,34	0/1:4,0:4:1.63:77,0,2	0/0:19,0:19:54.18:0,54,979	0/0:20,0:20:57.18:0,57,1002	0/0:8,0:8:21.07:0,21,426	0/1:21,2:23:56.72:448,0,57	0/1:21,0:21:8.69:471,0,9	0/1:17,2:19:4.74:390,0,5	0/1:8,0:8:14.54:78,0,15
chr10	81129419	.	AAC	A	2138.21	PASS	AB=0.969;AC=31;AF=0.554;AN=56;BaseQRankSum=3.133;DP=485;FS=5.363;HRun=0;HaplotypeScore=103.6236;InbreedingCoeff=0.7484;MQ=47.85;MQ0=9;MQRankSum=-4.052;QD=7.03;ReadPosRankSum=-5.671;VQSLOD=1.4235;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:63.05:0,63,878	1/1:11,1:12:16.33:153,16,0	0/1:28,0:4:2.39:2,0,75	0/0:32,0:13:9.40:0,9,240	1/1:23,0:21:23.17:119,23,0	0/0:18,0:17:54.18:0,54,861	0/0:16,0:16:45.07:0,45,674	1/1:26,2:24:30.97:401,31,0	0/0:11,0:11:26.86:0,27,412	1/1:19,0:19:11.34:172,11,0	1/1:22,0:22:28.87:235,29,0	0/0:13,0:13:39.02:0,39,590	0/0:14,0:14:42.09:0,42,619	0/0:7,0:7:18.04:0,18,293	1/1:20,0:19:25.61:144,26,0	0/1:21,1:21:34.70:200,0,35	1/1:14,0:14:18.06:142,18,0	1/1:4,0:4:4.19:13,4,0	1/1:18,0:14:24.91:144,25,0	1/1:18,1:19:29.54:226,30,0	1/1:5,0:5:3.06:41,3,0	0/0:19,0:19:57.15:0,57,835	0/0:21,0:21:63.14:0,63,894	0/0:8,0:8:24:0,24,357	1/1:23,0:23:8.89:84,9,0	0/1:18,1:19:3.14:125,0,3	1/1:19,1:20:16.85:100,17,0	1/1:8,0:8:5.45:47,5,0
chr10	81129420	.	AC	A	4351.29	PASS	AB=0.877;AC=32;AF=0.571;AN=56;BaseQRankSum=5.180;DP=488;FS=0.395;HRun=1;HaplotypeScore=92.1587;InbreedingCoeff=0.8670;MQ=47.42;MQ0=10;MQRankSum=-7.412;QD=14.13;ReadPosRankSum=-3.845;VQSLOD=2.7610;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:63.01:0,63,698	1/1:12,0:12:31.99:219,32,0	0/1:27,2:5:2.41:2,0,64	0/0:31,1:13:10.36:0,10,191	1/1:22,2:22:42.15:266,42,0	0/0:18,0:17:54.17:0,54,668	0/0:16,0:16:45.06:0,45,531	1/1:7,21:24:56.80:571,57,0	0/0:10,0:10:27.07:0,27,325	1/1:15,4:19:49.59:438,50,0	1/1:19,3:22:51.97:423,52,0	0/0:13,0:13:39:0,39,454	0/0:14,0:14:42.07:0,42,484	0/0:6,0:6:18.06:0,18,227	1/1:16,4:20:38.38:309,38,0	0/1:17,5:21:5.21:248,0,5	1/1:5,9:14:22.04:234,22,0	1/1:4,1:5:7.81:57,8,0	1/1:18,2:14:34.98:276,35,0	1/1:17,2:19:44.32:366,44,0	1/1:3,2:5:12.28:95,12,0	0/0:19,0:19:57.12:0,57,658	0/0:21,0:21:63.12:0,63,722	0/0:8,0:8:23.99:0,24,279	1/1:19,4:23:32.97:235,33,0	1/1:16,2:18:42.24:289,42,0	1/1:16,2:18:29.55:254,30,0	1/1:7,1:8:8.90:68,9,0
chr10	81131685	.	G	GA	1256.61	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-4.090;DP=621;FS=4.463;HRun=8;HaplotypeScore=64.0992;InbreedingCoeff=0.9935;MQ=77.60;MQ0=0;MQRankSum=-1.929;QD=22.85;ReadPosRankSum=0.899;VQSLOD=4.3825;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:19:42.12:485,42,0	0/0:16,0:16:48.03:0,48,439	0/0:14,0:14:23.72:0,24,213	0/0:14,0:14:22.74:0,23,201	0/0:26,0:26:65.99:0,66,593	0/0:23,0:23:63.02:0,63,572	0/0:16,0:16:45.01:0,45,407	0/0:48,0:48:99:0,113,1127	0/0:24,0:24:69.02:0,69,626	0/0:27,0:27:75.03:0,75,686	0/0:25,0:25:66.03:0,66,604	0/0:31,0:31:84.04:0,84,769	1/1:3,21:24:51.15:589,51,0	1/1:1,10:12:29.92:326,30,0	0/0:25,0:25:72.03:0,72,654	0/0:15,0:15:42.02:0,42,384	0/0:19,0:19:51.03:0,51,467	0/0:10,0:10:20.74:0,21,177	0/0:23,0:23:63.02:0,63,573	0/0:34,0:34:99:0,99,901	0/0:8,0:8:18.01:0,18,165	0/0:16,0:16:42.01:0,42,384	0/0:23,0:23:44.44:0,44,572	0/0:20,0:20:60:0,60,539	0/0:24,0:24:69.01:0,69,626	0/0:33,0:33:70.58:0,71,822	0/0:35,0:35:55.45:0,55,756	0/0:16,0:16:37.78:0,38,355
chr10	81132108	.	TG	T	11194.74	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=12.415;DP=544;FS=16.707;HRun=2;HaplotypeScore=52.7542;InbreedingCoeff=0.9981;MQ=77.48;MQ0=0;MQRankSum=-2.861;QD=36.23;ReadPosRankSum=2.948;VQSLOD=3.3316;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1457	1/1:0,7:7:21.07:273,21,0	0/0:23,0:23:66.12:0,66,911	0/0:6,0:6:18.03:0,18,241	1/1:0,27:27:75.17:937,75,0	0/0:22,0:22:66.21:0,66,967	0/0:22,0:22:66.17:0,66,924	1/1:0,25:25:75.21:935,75,0	0/0:19,0:19:54.17:0,54,790	1/1:0,17:17:48.16:620,48,0	1/1:0,15:15:42.14:545,42,0	0/0:19,0:19:57.19:0,57,854	0/0:11,0:11:33.11:0,33,493	0/0:18,0:18:54.15:0,54,768	1/1:0,32:32:90.29:1168,90,0	1/1:0,9:9:27.09:350,27,0	1/1:0,18:18:48.16:623,48,0	1/1:1,18:19:48.16:623,48,0	1/1:0,14:14:42.09:502,42,0	1/1:0,26:26:75.24:974,75,0	1/1:0,16:16:48.16:623,48,0	0/0:21,0:21:63.21:0,63,929	0/0:23,0:23:69.23:0,69,1032	0/0:17,0:17:51.17:0,51,764	1/1:0,23:23:63.20:818,63,0	1/1:2,17:19:51.15:647,51,0	1/1:1,22:23:66.21:857,66,0	1/1:0,19:19:54.18:701,54,0
chr10	81132354	.	ATACTC	A	166	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.462;DP=535;FS=0.000;HRun=0;HaplotypeScore=100.6447;InbreedingCoeff=0.9666;MQ=94.46;MQ0=0;MQRankSum=-1.963;QD=27.67;ReadPosRankSum=0.509;VQSLOD=2.9899;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.23:0,66,2043	1/1:1,5:6:12.04:252,12,0	0/0:30,0:30:78.25:0,78,2274	0/0:19,0:19:42.11:0,42,1101	0/0:25,0:25:72:0,72,2211	0/0:21,0:21:60.21:0,60,1833	0/0:16,0:16:42.14:0,42,1302	0/0:17,0:17:45.15:0,45,1287	0/0:12,0:12:33.11:0,33,999	0/0:26,0:26:66.23:0,66,2004	0/0:21,0:21:54.19:0,54,1671	0/0:19,0:19:57.20:0,57,1714	0/0:21,0:21:60.21:0,60,1809	0/0:21,0:21:57.20:0,57,1714	0/0:17,0:17:51.16:0,51,1445	0/0:10,0:10:30.10:0,30,927	0/0:19,0:19:54.19:0,54,1661	0/0:10,0:10:27.09:0,27,811	0/0:15,0:15:36.12:0,36,1116	0/0:18,0:18:51.17:0,51,1512	0/0:25,0:25:75.26:0,75,2298	0/0:21,0:21:54.19:0,54,1669	0/0:22,0:22:57.20:0,57,1762	0/0:16,0:16:48.14:0,48,1394	0/0:30,0:30:84.29:0,84,2600	0/0:22,0:22:63.22:0,63,1951	0/0:19,0:19:54.19:0,54,1667	0/0:14,0:14:42.14:0,42,1298
chr10	81132575	.	TG	T	6791.38	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-6.193;DP=474;FS=25.880;HRun=9;HaplotypeScore=59.1071;InbreedingCoeff=0.9637;MQ=80.41;MQ0=0;MQRankSum=-3.728;QD=23.02;ReadPosRankSum=-0.190;VQSLOD=3.2996;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:42.12:0,42,485	1/1:3,10:13:30.01:275,30,0	0/0:22,0:20:1.66:0,2,413	0/0:10,0:10:26.46:0,26,253	1/1:3,19:22:54.02:494,54,0	0/0:4,0:19:39.93:0,40,213	0/0:6,0:6:18.04:0,18,198	1/1:5,26:31:72:650,72,0	0/0:5,0:17:22.65:0,23,136	1/1:3,19:22:60.01:543,60,0	1/1:3,16:19:51.03:466,51,0	0/0:2,0:15:31.25:0,31,158	0/0:12,0:12:27.08:0,27,311	0/0:8,0:8:21.06:0,21,242	1/1:3,21:24:59.71:549,60,0	1/1:4,13:17:36.02:330,36,0	1/1:2,15:17:45.02:412,45,0	1/1:0,12:12:36.02:329,36,0	1/1:1,17:18:51.02:463,51,0	1/1:0,19:19:54.02:494,54,0	1/1:2,12:14:30.01:275,30,0	0/0:6,0:14:17.21:0,17,106	0/0:5,0:26:36.55:0,37,207	0/0:4,0:12:17.37:0,17,118	1/1:2,12:14:36.02:329,36,0	1/1:4,18:22:54.01:490,54,0	1/1:0,23:24:59.07:528,59,0	1/1:0,7:7:18.01:165,18,0
chr10	81133614	.	TC	T	1641.49	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-4.281;DP=629;FS=2.606;HRun=3;HaplotypeScore=123.2986;InbreedingCoeff=0.9993;MQ=83.81;MQ0=0;MQRankSum=-4.319;QD=31.57;ReadPosRankSum=1.486;VQSLOD=3.0145;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:69.22:855,69,0	0/0:13,0:13:39.11:0,39,526	0/0:22,0:22:63.19:0,63,850	0/0:17,0:17:48.07:0,48,587	0/0:37,0:37:99:0,111,1597	0/0:26,0:26:72.17:0,72,991	0/0:11,0:11:33.11:0,33,475	0/0:32,0:32:96.32:0,96,1380	0/0:15,0:15:45.15:0,45,648	0/0:23,0:23:69.21:0,69,974	0/0:32,0:32:90.29:0,90,1276	0/0:12,0:12:33.11:0,33,475	1/1:1,15:16:42.13:521,42,0	1/1:0,11:11:33.10:409,33,0	0/0:23,0:23:69.18:0,69,952	0/0:26,0:26:75.25:0,75,1078	0/0:26,0:26:78.24:0,78,1102	0/0:11,0:11:28.69:0,29,407	0/0:16,0:16:45.10:0,45,608	0/0:35,0:35:99:0,105,1512	0/0:19,0:19:54.14:0,54,737	0/0:24,0:24:72.23:0,72,1011	0/0:37,0:37:99:0,102,1451	0/0:16,0:16:45.15:0,45,648	0/0:32,0:32:90.30:0,90,1292	0/0:29,0:29:87.29:0,87,1251	0/0:32,0:32:96.31:0,96,1362	0/0:11,0:11:33.11:0,33,475
chr10	81133744	.	A	AAC	13577.75	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.974;DP=678;FS=6.195;HRun=0;HaplotypeScore=208.1889;InbreedingCoeff=0.9573;MQ=60.92;MQ0=17;MQRankSum=-2.281;QD=24.87;ReadPosRankSum=2.359;VQSLOD=5.1836;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,11:31:65.66:771,66,0	1/1:4,0:4:12.02:123,12,0	0/0:69,0:25:42.06:0,42,568	0/0:52,0:27:36.47:0,36,410	1/1:37,0:37:92.62:907,93,0	1/1:22,9:30:22.27:570,22,0	0/0:9,0:9:21.07:0,21,273	1/1:40,0:40:92.90:983,93,0	1/1:12,5:16:27.07:336,27,0	1/1:31,0:31:75.15:913,75,0	1/1:16,0:16:41.82:409,42,0	1/1:12,5:17:44.44:547,44,0	1/1:5,4:9:20.42:229,20,0	1/1:13,0:13:9.03:117,9,0	1/1:16,0:16:42.07:431,42,0	1/1:26,0:26:66.04:680,66,0	1/1:23,0:23:54:578,54,0	1/1:15,0:15:26.03:319,26,0	1/1:23,0:23:54.09:648,54,0	1/1:33,0:33:71.96:765,72,0	1/1:31,0:31:72.10:770,72,0	1/1:7,10:17:36.05:436,36,0	1/1:7,5:12:24.06:298,24,0	1/1:7,3:10:14.52:168,15,0	1/1:17,0:17:35.93:383,36,0	1/1:38,0:38:99:1176,108,0	1/1:23,0:23:63:663,63,0	1/1:14,0:14:40.10:356,40,0
chr10	81133752	.	CA	C	10348.12	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=3.945;DP=680;FS=5.471;HRun=2;HaplotypeScore=184.1247;InbreedingCoeff=0.6846;MQ=56.71;MQ0=20;MQRankSum=-2.108;QD=19.82;ReadPosRankSum=3.415;VQSLOD=4.7029;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,1:30:33.02:278,33,0	1/1:0,4:4:11.87:126,12,0	0/0:79,1:25:65.56:0,66,848	0/0:55,0:29:67.80:0,68,865	1/1:7,26:33:73.86:774,74,0	0/1:35,0:34:21.56:117,0,22	0/0:11,0:11:28.91:0,29,388	1/1:16,23:39:99:840,101,0	1/1:15,1:15:8.68:106,9,0	1/1:15,16:31:74.89:729,75,0	1/1:7,10:17:40.76:369,41,0	1/1:18,0:18:13.47:180,13,0	1/1:9,0:9:1.35:61,1,0	0/0:12,0:12:3.74:0,4,8	1/1:5,12:17:41.34:487,41,0	1/1:5,19:24:66.13:710,66,0	1/1:8,12:20:48.22:485,48,0	1/1:7,8:15:35.63:327,36,0	1/1:13,11:24:38.64:492,39,0	1/1:11,17:28:68.70:701,69,0	1/1:9,22:30:74.99:786,75,0	1/1:15,0:15:15.53:111,16,0	1/1:10,0:10:20.86:98,21,0	0/1:13,0:13:2:21,0,2	1/1:5,9:14:37.57:353,38,0	1/1:12,27:38:99:1094,107,0	1/1:7,16:23:64.70:652,65,0	1/1:2,13:15:43.90:451,44,0
chr10	81133753	.	A	AC	7792.10	PASS	AB=0.630;AC=49;AF=0.875;AN=56;BaseQRankSum=6.293;DP=689;FS=6.721;HRun=1;HaplotypeScore=201.3433;InbreedingCoeff=0.8322;MQ=55.87;MQ0=20;MQRankSum=-1.345;QD=14.38;ReadPosRankSum=4.473;VQSLOD=4.7150;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,9:32:40.12:338,40,0	1/1:4,0:4:9.44:71,9,0	0/0:81,0:24:65.55:0,66,813	0/0:56,0:30:66.60:0,67,838	1/1:33,0:33:69.48:474,69,0	0/1:14,20:33:4.26:208,0,4	0/0:10,0:10:28.91:0,29,374	1/1:33,0:39:97.68:582,98,0	1/1:9,5:14:21.79:126,22,0	1/1:25,0:28:74.45:492,74,0	1/1:15,0:16:39.54:230,40,0	1/1:12,6:18:39.47:285,39,0	1/1:5,5:10:16.45:127,16,0	1/1:0,0:19:8.83:69,9,0	1/1:14,0:15:41.05:320,41,0	1/1:24,0:24:65.53:459,66,0	1/1:18,0:18:47.92:346,48,0	1/1:13,3:16:36.98:295,37,0	1/1:20,0:24:38.46:368,38,0	1/1:28,0:28:67.37:464,67,0	1/1:30,0:29:74.42:507,74,0	1/1:12,3:15:29.50:132,30,0	1/1:9,1:10:20.86:98,21,0	1/1:6,11:17:13.22:106,13,0	1/1:13,1:14:36.63:228,37,0	1/1:38,1:38:99:743,102,0	1/1:23,0:23:63.83:416,64,0	1/1:18,1:19:30.54:309,31,0
chr10	81133756	.	AC	A	9783.13	PASS	AB=0.920;AC=36;AF=0.643;AN=56;BaseQRankSum=5.015;DP=682;FS=3.144;HRun=1;HaplotypeScore=182.2557;InbreedingCoeff=0.6322;MQ=55.66;MQ0=20;MQRankSum=-0.957;QD=22.44;ReadPosRankSum=5.247;VQSLOD=4.9900;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:33:6.64:7,0,191	1/1:0,4:4:11.95:138,12,0	0/0:81,0:24:63.55:0,64,829	0/0:58,0:30:73.90:0,74,954	1/1:8,24:34:75.66:785,76,0	0/0:35,0:34:11.84:0,12,210	0/0:11,0:11:31.66:0,32,463	1/1:14,22:37:99:953,107,0	0/1:14,0:13:8.76:9,0,27	1/1:11,16:27:75.72:793,76,0	1/1:6,10:16:36.21:376,36,0	0/0:18,0:18:5.17:0,5,240	0/0:12,0:12:7.54:0,8,147	0/0:14,0:14:9.03:0,9,106	1/1:2,12:14:38.49:487,38,0	1/1:6,18:25:66.50:751,66,0	1/1:4,12:16:39.94:449,40,0	0/1:9,8:17:86.17:245,0,86	1/1:11,10:22:38.91:458,39,0	1/1:7,18:26:66.36:700,66,0	1/1:11,21:32:85.52:924,86,0	0/1:15,0:15:16.74:17,0,35	1/1:9,0:9:9.07:28,9,0	0/0:17,0:17:4.23:0,4,174	1/1:3,9:12:31.86:322,32,0	1/1:10,27:37:67.46:1122,67,0	1/1:7,16:23:66.12:714,66,0	1/1:4,15:19:19.94:506,20,0
chr10	81134096	.	TTATAA	T	10569.98	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=8.568;DP=270;FS=3.358;HRun=0;HaplotypeScore=69.9601;InbreedingCoeff=0.8761;MQ=60.80;MQ0=1;MQRankSum=-6.835;QD=46.36;ReadPosRankSum=0.881;VQSLOD=4.5382;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:24.08:0,24,744	1/1:1,3:4:9.03:189,9,0	0/0:5,0:5:14.41:0,14,330	0/0:5,0:5:12.04:0,12,344	1/1:2,16:18:42.14:814,42,0	1/1:0,12:12:33.11:692,33,0	0/0:5,0:5:15.05:0,15,415	1/1:3,14:17:42.10:722,42,0	1/1:0,10:10:24.08:504,24,0	1/1:2,13:15:39.13:818,39,0	1/1:1,11:12:27.05:461,27,0	1/1:2,7:9:18.06:367,18,0	0/0:11,0:11:33.11:0,33,923	0/0:6,0:6:18.06:0,18,509	1/1:3,11:14:33.11:692,33,0	1/1:0,3:3:9.03:189,9,0	1/1:1,7:8:18.06:378,18,0	1/1:0,1:1:3.01:63,3,0	1/1:1,10:10:27.07:526,27,0	1/1:1,15:16:33.11:692,33,0	1/1:2,6:8:12.04:252,12,0	1/1:0,4:4:6.02:126,6,0	1/1:2,6:8:18.06:351,18,0	1/1:0,3:3:6.02:126,6,0	1/1:0,14:14:36.12:730,36,0	1/1:1,16:16:48.16:1007,48,0	1/1:3,10:13:24.08:492,24,0	1/1:2,9:11:18.06:378,18,0
chr10	81134162	.	A	ATGTG	5095.79	PASS	AC=36;AF=0.750;AN=48;BaseQRankSum=0.964;DP=159;FS=19.677;HRun=0;HaplotypeScore=55.6082;InbreedingCoeff=0.6656;MQ=53.18;MQ0=3;MQRankSum=-4.812;QD=47.18;ReadPosRankSum=-0.444;VQSLOD=3.3991;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:9.03:0,9,148	1/1:2,0:2:3.01:58,3,0	0/0:10,0:5:12.01:0,12,143	0/0:23,0:6:5.95:0,6,68	1/1:2,2:4:6.02:148,6,0	1/1:5,0:8:12.04:246,12,0	0/0:2,0:2:6.02:0,6,112	1/1:13,12:24:53.37:1315,53,0	1/1:2,0:4:9.03:191,9,0	1/1:2,3:5:9.03:238,9,0	1/1:2,4:6:15.05:371,15,0	1/1:2,0:4:9.03:197,9,0	0/0:6,0:6:12.04:0,12,224	0/0:4,0:4:12.04:0,12,213	1/1:2,2:4:6.02:150,6,0	1/1:0,1:1:3.01:75,3,0	1/1:1,3:4:8.98:159,9,0	./.	1/1:6,1:7:2.49:211,2,0	1/1:1,6:7:15.05:376,15,0	1/1:0,1:1:3.01:75,3,0	./.	./.	./.	1/1:3,3:6:12.04:302,12,0	1/1:3,4:7:18.02:390,18,0	1/1:2,4:7:18.06:436,18,0	1/1:3,2:5:6.02:158,6,0
chr10	81134175	.	TA	T	638.91	PASS	AC=16;AF=0.533;AN=30;BaseQRankSum=1.099;DP=113;FS=7.871;HRun=2;HaplotypeScore=47.2875;InbreedingCoeff=0.5612;MQ=55.24;MQ0=8;MQRankSum=-3.333;QD=15.58;ReadPosRankSum=-0.054;VQSLOD=2.7314;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:1:3.01:0,3,40	./.	0/0:11,0:4:9.02:0,9,105	0/0:29,0:6:5.97:0,6,78	./.	1/1:1,3:4:2.74:12,3,0	0/0:1,0:1:2.97:0,3,20	1/1:8,6:14:27.07:330,27,0	1/1:1,1:2:3.01:33,3,0	1/1:0,3:3:9.03:115,9,0	./.	./.	0/0:4,0:4:9.03:0,9,125	0/0:2,0:2:6.02:0,6,90	./.	./.	0/0:3,0:3:0:0,0,0	./.	1/1:1,3:4:9.02:104,9,0	./.	./.	./.	./.	./.	./.	1/1:2,3:5:6.02:76,6,0	1/1:2,3:5:6.01:66,6,0	1/1:3,1:3:2.99:23,3,0
chr10	81134176	.	A	AT	709.92	PASS	AC=14;AF=0.467;AN=30;BaseQRankSum=0.461;DP=100;FS=8.473;HRun=1;HaplotypeScore=43.3581;InbreedingCoeff=0.5630;MQ=57.54;MQ0=8;MQRankSum=-2.941;QD=23.66;ReadPosRankSum=-0.213;VQSLOD=2.6664;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:1:3.01:0,3,40	./.	0/0:11,0:4:9.02:0,9,105	0/0:29,0:6:5.55:0,6,78	./.	0/0:4,0:4:1.25:0,1,3	0/0:1,0:1:2.97:0,3,20	1/1:6,4:10:27.09:353,27,0	1/1:2,0:2:3.01:33,3,0	1/1:3,0:3:9.03:115,9,0	./.	./.	0/0:3,0:3:9.03:0,9,122	0/0:2,0:2:6.02:0,6,75	./.	./.	0/0:0,2:2:0:0,0,0	./.	1/1:3,0:3:9.03:124,9,0	./.	./.	./.	./.	./.	./.	1/1:3,0:3:6.02:76,6,0	1/1:3,2:5:6.02:86,6,0	1/1:1,1:3:3.01:42,3,0
chr10	81134566	.	T	TAA	11940.20	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=2.155;DP=436;FS=3.824;HRun=8;HaplotypeScore=98.8994;InbreedingCoeff=0.6879;MQ=71.89;MQ0=0;MQRankSum=-5.146;QD=28.70;ReadPosRankSum=1.948;VQSLOD=4.8881;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:20:34.93:120,35,0	1/1:2,3:5:12:163,12,0	0/1:11,0:10:13.44:13,0,177	0/0:11,0:11:17.23:0,17,217	1/1:9,19:28:66.22:1032,66,0	1/1:3,0:17:39.80:137,40,0	0/0:9,0:9:27.05:0,27,291	1/1:3,27:30:78.25:1200,78,0	1/1:2,0:11:25.85:106,26,0	1/1:5,13:19:56.46:782,56,0	1/1:4,16:20:57.08:806,57,0	1/1:4,0:17:35.89:120,36,0	1/1:2,0:16:1.02:77,1,0	1/1:0,0:11:19.96:69,20,0	1/1:0,16:16:48.16:762,48,0	1/1:3,15:19:53.67:818,54,0	1/1:1,13:14:42.10:636,42,0	1/1:1,6:7:18.06:286,18,0	1/1:13,14:28:55.92:812,56,0	1/1:3,12:16:38.62:579,39,0	1/1:1,8:9:24.08:381,24,0	1/1:4,0:12:31.14:143,31,0	1/1:4,0:15:28.26:120,28,0	1/1:2,0:7:11.80:40,12,0	1/1:4,12:16:42.10:630,42,0	1/1:2,22:25:63.21:981,63,0	1/1:4,13:17:51.09:748,51,0	1/1:0,9:9:24.08:381,24,0
chr10	81134645	.	AATATAC	A	19071.80	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=1.696;DP=430;FS=1.458;HRun=0;HaplotypeScore=128.1033;InbreedingCoeff=0.9236;MQ=67.63;MQ0=0;MQRankSum=-13.601;QD=58.50;ReadPosRankSum=1.799;VQSLOD=5.3015;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.20:0,66,2227	1/1:0,9:9:27.09:632,27,0	0/0:18,0:18:48.16:0,48,1509	0/0:9,0:9:27.09:0,27,968	1/1:3,20:23:57.17:1320,57,0	1/1:2,15:16:42.14:1009,42,0	0/0:11,0:11:33.11:0,33,1189	1/1:6,24:30:69.22:1522,69,0	1/1:1,20:21:60.21:1442,60,0	1/1:5,23:28:66.23:1587,66,0	1/1:2,7:9:18.06:432,18,0	1/1:3,12:15:36.12:861,36,0	0/0:19,0:19:54.17:0,54,1863	0/0:22,0:22:57.20:0,57,2053	1/1:5,9:14:27.09:612,27,0	1/1:5,12:17:39.13:888,39,0	1/1:0,11:11:33.11:793,33,0	1/1:0,2:2:6.02:144,6,0	1/1:3,19:21:48.16:1154,48,0	1/1:1,10:11:27.09:617,27,0	1/1:0,5:5:15.05:360,15,0	1/1:1,10:12:36.12:805,36,0	1/1:2,6:8:21.07:478,21,0	1/1:1,5:6:3.90:74,4,0	1/1:0,14:14:39.13:888,39,0	1/1:0,22:22:63.20:1453,63,0	1/1:2,26:28:78.27:1855,78,0	1/1:0,2:2:6.02:144,6,0
chr10	81134732	.	T	TC	16600.53	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-6.385;DP=493;FS=4.992;HRun=0;HaplotypeScore=81.0014;InbreedingCoeff=0.9809;MQ=66.05;MQ0=0;MQRankSum=-5.690;QD=41.09;ReadPosRankSum=2.550;VQSLOD=5.6313;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.09:0,57,703	1/1:0,7:7:21.07:301,21,0	0/0:10,0:7:21.05:0,21,259	0/0:16,0:13:24.13:0,24,325	1/1:1,21:22:57.19:867,57,0	1/1:0,21:21:60.20:897,60,0	0/0:10,0:10:30.10:0,30,419	1/1:1,36:37:99:1526,108,0	1/1:0,10:10:30.10:452,30,0	1/1:0,21:21:63.21:915,63,0	1/1:0,26:27:72.22:1013,72,0	1/1:0,14:14:42.11:597,42,0	0/0:10,0:10:30:0,30,348	0/0:22,0:22:66.13:0,66,826	1/1:0,20:20:57.19:836,57,0	1/1:1,19:20:51.17:737,51,0	1/1:0,16:16:45.15:671,45,0	1/1:0,3:3:9.03:136,9,0	1/1:0,20:20:57.19:818,57,0	1/1:1,34:35:99:1422,99,0	1/1:0,6:6:18.06:271,18,0	1/1:0,18:18:51.17:750,51,0	1/1:2,15:17:42.14:630,42,0	1/1:0,6:6:15.05:227,15,0	1/1:1,30:31:87.29:1290,87,0	1/1:1,17:18:54.18:779,54,0	1/1:1,24:25:72.24:1059,72,0	1/1:0,10:10:27.09:407,27,0
chr10	81140849	.	A	AG	4771.20	PASS	AB=0.645;AC=17;AF=0.304;AN=56;BaseQRankSum=-5.254;DP=495;FS=16.167;HRun=1;HaplotypeScore=105.7747;InbreedingCoeff=-0.1528;MQ=36.34;MQ0=28;MQRankSum=-4.758;QD=16.57;ReadPosRankSum=1.812;VQSLOD=3.9189;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:88,0:79:99:0,196,2492	0/0:2,0:2:6.02:0,6,78	0/0:10,0:6:18.05:0,18,214	0/0:16,0:13:39.11:0,39,483	0/0:9,0:6:6.02:0,6,78	0/1:2,8:10:47.52:325,0,48	0/1:18,9:26:99:331,0,510	0/1:17,8:15:99:105,0,242	0/1:2,8:8:14.83:263,0,15	0/1:9,15:22:99:564,0,190	1/1:5,10:13:18.11:425,18,0	1/1:0,12:12:30.10:440,30,0	0/1:2,7:8:14.71:287,0,15	0/0:7,0:7:6.02:0,6,78	0/1:2,6:6:20.75:198,0,21	0/0:12,0:11:18.96:0,19,171	0/1:5,9:13:99:268,0,122	0/0:3,0:1:2.96:0,3,19	0/1:17,16:23:99:489,0,108	0/1:4,10:13:86.63:242,0,87	0/1:7,11:13:44.73:369,0,45	0/0:8,0:6:11.97:0,12,134	0/0:7,0:5:12.04:0,12,154	0/0:3,0:3:6.02:0,6,78	0/1:43,13:49:99:272,0,1188	0/0:23,0:23:69.22:0,69,889	0/1:8,5:13:99:192,0,128	0/0:19,0:17:33.11:0,33,428
chr10	81140850	.	G	GAT	317.68	PASS	AB=0.600;AC=1;AF=0.018;AN=56;BaseQRankSum=-1.024;DP=494;FS=0.000;HRun=0;HaplotypeScore=128.2631;InbreedingCoeff=-0.0424;MQ=36.35;MQ0=28;MQRankSum=-2.484;QD=26.47;ReadPosRankSum=2.209;VQSLOD=4.6608;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:87,0:78:99:0,195,1756	0/0:2,0:2:6:0,6,53	0/0:10,0:6:18.03:0,18,219	0/0:18,0:13:38.42:0,38,467	0/0:9,0:6:6.01:0,6,55	0/0:10,0:10:28.26:0,28,159	0/0:27,0:26:70.60:0,71,810	0/0:25,0:15:29.70:0,30,210	0/0:10,0:8:22.84:0,23,127	0/0:24,0:22:60.42:0,60,391	0/0:13,0:13:24.95:0,25,135	0/0:12,0:12:27.95:0,28,130	0/0:9,0:8:22.12:0,22,111	0/0:7,0:7:6.01:0,6,56	0/0:8,0:6:14.20:0,14,81	0/1:4,8:11:77.66:392,0,78	0/0:14,0:13:32:0,32,221	0/0:3,0:1:3:0,3,27	0/0:31,0:23:46:0,46,277	0/0:14,0:13:25.17:0,25,164	0/0:18,0:13:29.02:0,29,184	0/0:8,0:6:12.01:0,12,109	0/0:7,0:5:12.01:0,12,109	0/0:3,0:3:6:0,6,54	0/0:56,0:49:99:0,125,1058	0/0:23,0:23:68.77:0,69,789	0/0:12,0:13:20.55:0,21,222	0/0:19,0:17:33.07:0,33,466
chr10	81141047	.	CTG	C	67.55	PASS	AC=8;AF=0.500;AN=16;BaseQRankSum=-0.922;DP=148;FS=0.000;HRun=0;HaplotypeScore=8.6659;MQ=9.61;MQ0=124;MQRankSum=0.421;QD=3.22;ReadPosRankSum=-0.421;VQSLOD=0.6584;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	0/0:22,0:2:3.01:0,3,56	./.	1/1:3,1:1:3.01:44,3,0	0/0:3,0:2:3.01:0,3,40	./.	1/1:2,2:3:2.97:20,3,0	./.	./.	./.	1/1:1,1:1:3.01:44,3,0	./.	./.	1/1:10,1:2:3.01:44,3,0	./.	./.	./.	./.	./.	./.	0/0:3,0:1:2.97:0,3,20	./.	0/0:5,0:2:3.01:0,3,40
chr10	81145786	.	T	TT	161.72	PASS	AB=1.000;AC=3;AF=0.50;AN=6;BaseQRankSum=0.000;DP=19;FS=6.021;HRun=0;HaplotypeScore=14.1048;MQ=62.93;MQ0=3;MQRankSum=0.000;QD=16.17;ReadPosRankSum=0.000;VQSLOD=4.2706;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:4,0:1:3.01:0,3,32	./.	./.	./.	./.	0/1:3,0:2:28.88:39,0,29	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:2,4:5:15.03:194,15,0	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	81147872	.	CAAA	C	963.37	PASS	AC=6;AF=0.429;AN=14;BaseQRankSum=-2.002;DP=77;FS=13.180;HRun=11;HaplotypeScore=57.1984;MQ=88.35;MQ0=2;MQRankSum=-1.370;QD=29.19;ReadPosRankSum=4.436;VQSLOD=0.9922;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:18:48.16:627,48,0	./.	0/0:18,0:9:19.60:0,20,247	0/0:18,0:10:10.45:0,10,182	0/0:1,0:1:1.55:0,2,4	./.	0/0:4,0:4:12.04:0,12,243	./.	./.	./.	./.	./.	1/1:1,6:7:18.06:237,18,0	1/1:0,6:6:15.05:197,15,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	81148171	.	AG	A	12897.89	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=10.452;DP=615;FS=4.318;HRun=1;HaplotypeScore=138.1901;InbreedingCoeff=0.9760;MQ=72.66;MQ0=5;MQRankSum=-7.229;QD=26.87;ReadPosRankSum=3.554;VQSLOD=4.8497;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:39.08:0,39,521	1/1:5,12:17:47.96:432,48,0	0/0:40,0:32:80.53:0,81,1008	0/0:28,1:21:31.20:0,31,414	1/1:3,33:36:99:935,102,0	1/1:2,17:19:53.98:499,54,0	0/0:15,0:15:45.12:0,45,633	1/1:2,29:30:86.37:788,86,0	1/1:5,20:25:71.99:672,72,0	1/1:5,17:23:69.06:697,69,0	1/1:4,20:24:71.82:640,72,0	1/1:3,19:21:60.01:566,60,0	0/0:16,0:16:45.14:0,45,654	0/0:17,0:17:48.15:0,48,697	1/1:4,13:17:51.01:491,51,0	1/1:2,19:21:60.06:588,60,0	1/1:3,24:27:81.01:778,81,0	1/1:0,4:4:8.98:73,9,0	1/1:3,10:12:33.05:341,33,0	1/1:5,29:34:99:965,99,0	1/1:1,6:7:8.85:178,9,0	1/1:2,20:21:62.88:568,63,0	1/1:4,23:27:74.69:644,75,0	1/1:2,10:12:36.01:361,36,0	1/1:4,22:27:77.59:716,78,0	1/1:8,16:24:68.61:642,69,0	1/1:2,32:34:99:995,102,0	1/1:0,12:12:33.04:330,33,0
chr10	81148173	.	AC	A	10960.86	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=11.556;DP=611;FS=3.634;HRun=2;HaplotypeScore=144.7967;InbreedingCoeff=0.9630;MQ=70.56;MQ0=5;MQRankSum=-6.440;QD=23.12;ReadPosRankSum=3.689;VQSLOD=4.9096;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.13:0,42,608	1/1:5,12:17:47.83:381,48,0	0/0:41,0:31:77.90:0,78,996	0/0:30,0:21:5.40:0,5,318	1/1:2,32:34:99:808,101,0	1/1:5,16:21:59.83:497,60,0	0/0:16,0:16:48.14:0,48,677	1/1:7,22:29:82.78:627,83,0	1/1:5,18:23:68.77:556,69,0	1/1:4,17:21:59.78:498,60,0	1/1:5,19:24:71.09:552,71,0	1/1:3,18:20:59.78:491,60,0	0/0:17,0:17:51.14:0,51,719	0/0:17,0:17:48.12:0,48,693	1/1:3,13:16:47.79:385,48,0	1/1:2,18:20:59.92:516,60,0	1/1:6,23:28:81.28:685,81,0	1/1:1,3:4:8.93:63,9,0	1/1:4,9:12:30.82:258,31,0	1/1:9,25:34:95.53:766,96,0	1/1:1,6:7:20.81:168,21,0	1/1:4,18:21:62.15:494,62,0	1/1:7,22:28:75.27:569,75,0	1/1:3,9:12:35.91:300,36,0	1/1:7,20:27:77.37:615,77,0	1/1:7,16:23:68.33:559,68,0	1/1:3,32:35:99:898,105,0	1/1:2,10:12:32.87:275,33,0
chr10	81148437	.	A	AT	18564.52	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=14.314;DP=640;FS=12.765;HRun=1;HaplotypeScore=150.2636;InbreedingCoeff=0.9979;MQ=80.96;MQ0=0;MQRankSum=-6.222;QD=36.33;ReadPosRankSum=3.173;VQSLOD=2.8186;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1348	1/1:0,14:14:42.14:577,42,0	0/0:20,0:20:40.40:0,40,679	0/0:17,0:17:45.12:0,45,556	1/1:2,35:37:99:1311,99,0	1/1:1,26:27:69.23:941,69,0	0/0:15,0:15:42.14:0,42,545	1/1:4,47:51:99:1856,138,0	1/1:1,21:22:63.19:844,63,0	1/1:1,25:26:75.22:996,75,0	1/1:2,28:30:78.26:1068,78,0	1/1:1,14:15:43.03:577,43,0	0/0:20,0:20:60.16:0,60,748	0/0:20,0:20:57.16:0,57,716	1/1:1,25:26:63.21:861,63,0	1/1:1,14:15:42.14:574,42,0	1/1:1,12:13:30.10:408,30,0	1/1:2,5:7:17.65:213,18,0	1/1:2,21:23:63.64:829,64,0	1/1:2,33:35:99:1355,100,0	1/1:2,12:14:37.28:470,37,0	1/1:1,25:26:72.24:981,72,0	1/1:0,28:27:78.21:1038,78,0	1/1:1,11:12:33.11:452,33,0	1/1:0,17:17:48.11:628,48,0	1/1:2,30:32:86.80:1180,87,0	1/1:5,24:29:73.40:951,73,0	1/1:0,12:12:33.11:454,33,0
chr10	81148867	.	GAACAAACAA	G	16202.55	PASS	AB=0.870;AC=31;AF=0.554;AN=56;BaseQRankSum=9.572;DP=580;FS=1.588;HRun=0;HaplotypeScore=196.8229;InbreedingCoeff=0.9090;MQ=60.03;MQ0=2;MQRankSum=-13.314;QD=51.77;ReadPosRankSum=-0.430;VQSLOD=4.2327;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:94.83:0,95,3163	1/1:5,9:14:39.12:973,39,0	0/0:20,0:17:21.06:0,21,635	0/0:22,0:19:27.44:0,27,582	1/1:5,18:23:60.19:1406,60,0	0/0:34,0:34:96.32:0,96,3788	0/0:16,0:15:39.13:0,39,1523	1/1:18,3:21:23.82:524,24,0	0/0:17,0:17:30.10:0,30,1346	1/1:12,15:27:66.22:1711,66,0	1/1:9,15:24:57.18:1375,57,0	0/0:24,0:24:48.16:0,48,2087	0/0:16,0:16:42.13:0,42,1544	0/0:15,0:15:30.10:0,30,1239	1/1:6,8:14:33.11:848,33,0	1/1:8,9:17:30.10:816,30,0	1/1:18,4:22:36.12:735,36,0	0/1:17,3:20:31.95:430,0,32	1/1:9,12:21:48.16:1270,48,0	1/1:9,15:24:51.17:1310,51,0	1/1:5,4:9:13.29:361,13,0	0/0:16,0:16:45.15:0,45,1595	0/0:24,0:24:60.21:0,60,2591	0/0:21,0:21:45.11:0,45,1840	1/1:5,13:18:39.13:1070,39,0	1/1:13,14:27:63.18:1544,63,0	1/1:10,17:26:66.23:1739,66,0	1/1:5,0:5:6.02:90,6,0
chr10	81148920	.	AG	A	17315.62	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=9.846;DP=534;FS=16.322;HRun=1;HaplotypeScore=117.8039;InbreedingCoeff=0.9733;MQ=72.00;MQ0=0;MQRankSum=-4.181;QD=39.99;ReadPosRankSum=3.752;VQSLOD=2.9657;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.24:0,90,1359	1/1:0,16:16:48.16:670,48,0	0/0:15,0:15:38.31:0,38,617	0/0:13,0:13:6.51:0,7,389	1/1:0,32:32:90.30:1255,90,0	1/1:0,32:32:90.30:1258,90,0	0/0:16,0:16:45.15:0,45,719	1/1:1,26:27:78.22:1055,78,0	1/1:0,14:14:39.13:545,39,0	1/1:0,20:20:60.18:819,60,0	1/1:0,24:24:66.22:919,66,0	1/1:0,18:18:54.18:755,54,0	0/0:15,0:15:45.13:0,45,692	0/0:11,0:11:33.11:0,33,525	1/1:0,17:17:51.17:712,51,0	1/1:0,18:18:54.18:753,54,0	1/1:0,20:20:57.14:771,57,0	1/1:0,18:18:54.18:754,54,0	1/1:0,19:19:57.19:796,57,0	1/1:0,24:24:72.24:1004,72,0	1/1:0,11:11:21.07:293,21,0	1/1:0,13:13:36.12:503,36,0	1/1:0,20:20:53.89:755,54,0	1/1:0,16:16:45.15:629,45,0	1/1:0,18:18:54.18:753,54,0	1/1:0,21:21:63.21:880,63,0	1/1:0,31:31:93.10:1268,93,0	1/1:0,4:4:12.04:168,12,0
chr10	81149152	.	G	GT	17293.19	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-8.261;DP=530;FS=22.229;HRun=4;HaplotypeScore=46.4510;InbreedingCoeff=0.9943;MQ=69.80;MQ0=1;MQRankSum=-7.305;QD=36.25;ReadPosRankSum=4.079;VQSLOD=2.7995;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:54.18:734,54,0	1/1:0,6:6:18.06:246,18,0	0/0:24,0:21:57.13:0,57,614	0/0:19,0:16:45.13:0,45,507	1/1:3,29:32:84.19:1100,84,0	1/1:1,21:22:54.18:739,54,0	0/0:10,0:10:27.08:0,27,306	1/1:4,23:27:71.80:920,72,0	1/1:0,18:18:54.18:738,54,0	1/1:0,26:26:75.24:1011,75,0	1/1:0,23:23:66.13:860,66,0	1/1:1,11:12:30.10:410,30,0	1/1:2,15:17:42.14:573,42,0	1/1:0,17:17:45.15:615,45,0	1/1:1,18:19:57.19:777,57,0	1/1:0,19:19:54.18:739,54,0	1/1:2,14:16:42.14:574,42,0	1/1:1,9:9:21.07:287,21,0	1/1:3,18:21:57.15:731,57,0	1/1:3,25:28:78.09:1034,78,0	1/1:1,13:14:39.13:533,39,0	1/1:0,17:17:42.14:569,42,0	1/1:1,24:25:66.22:900,66,0	1/1:1,12:13:36.12:492,36,0	1/1:1,29:30:72.20:963,72,0	1/1:1,17:18:51.16:681,51,0	1/1:2,19:21:54.18:738,54,0	1/1:0,8:8:24.08:328,24,0
chr10	81150616	.	AGTGTGTGTGTGT	A	11701.67	PASS	AB=0.804;AC=36;AF=0.643;AN=56;BaseQRankSum=4.204;DP=777;FS=16.636;HRun=0;HaplotypeScore=302.2519;InbreedingCoeff=0.4668;MQ=59.57;MQ0=8;MQRankSum=-7.914;QD=22.20;ReadPosRankSum=1.615;VQSLOD=2.1139;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:42:57.88:0,58,2782	1/1:6,0:6:3.01:76,3,0	0/0:40,0:26:6.02:0,6,141	0/0:33,0:24:6.49:0,6,138	1/1:11,6:17:8.82:229,9,0	0/1:14,0:22:12.08:284,0,12	0/0:31,0:35:26.93:0,27,1156	0/0:35,0:35:9.03:0,9,112	0/1:21,1:34:6.90:506,0,7	1/1:21,4:25:11.13:414,11,0	1/1:14,8:22:27.05:633,27,0	1/1:21,1:30:27.08:423,27,0	0/0:30,0:30:48.16:0,48,2381	0/0:29,0:34:44.36:0,44,2257	1/1:23,19:42:54.19:1713,54,0	1/1:28,12:41:42.14:1343,42,0	1/1:15,3:17:12.04:403,12,0	0/1:13,0:13:93.68:94,0,212	1/1:16,3:18:9:311,9,0	1/1:15,6:21:21.07:604,21,0	1/1:34,21:54:15.52:433,16,0	1/1:21,0:36:16.06:447,16,0	1/1:13,0:22:8.54:241,9,0	0/1:14,0:18:17.31:37,0,17	1/1:13,8:22:36.11:869,36,0	0/1:20,10:30:4.24:1005,0,4	1/1:8,14:22:38.92:1336,39,0	0/1:9,3:12:16.08:299,0,16
chr10	81150689	.	GAC	G	825.20	PASS	AB=0.957;AC=20;AF=0.357;AN=56;BaseQRankSum=6.746;DP=776;FS=4.547;HRun=0;HaplotypeScore=300.6506;InbreedingCoeff=0.3913;MQ=55.36;MQ0=11;MQRankSum=-5.340;QD=2.07;ReadPosRankSum=-4.712;VQSLOD=1.2338;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:26.72:0,27,354	0/0:10,0:10:17.78:0,18,189	0/0:53,0:25:71.13:0,71,1130	0/1:44,2:17:33.32:33,0,447	0/1:18,0:18:2.61:3,0,87	1/1:29,1:30:40.58:131,41,0	0/0:26,0:26:68.18:0,68,1223	0/1:16,5:21:79.99:80,0,726	1/1:30,0:30:30.32:107,30,0	0/0:27,0:27:81.13:0,81,1249	0/0:25,0:25:24.08:0,24,362	1/1:39,0:39:43.35:156,43,0	0/0:20,0:19:33.75:0,34,446	0/0:19,1:20:4.96:0,5,222	0/1:40,0:40:99:120,0,516	0/0:46,0:46:10.47:0,10,826	0/0:16,0:16:3.58:0,4,279	0/1:9,1:10:0.94:1,0,172	0/0:29,0:29:44.27:0,44,1177	0/0:30,0:30:35.69:0,36,495	0/1:49,1:49:20.09:20,0,471	1/1:38,0:38:39.01:141,39,0	1/1:20,0:20:17.27:63,17,0	1/1:19,1:20:12.16:52,12,0	0/0:20,0:20:17.22:0,17,257	0/1:32,0:32:99:102,0,829	0/0:28,0:28:16.85:0,17,566	0/1:5,0:5:5.96:6,0,157
chr10	81150690	.	ACTGTGT	A	7223.51	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=1.737;DP=794;FS=2.222;HRun=0;HaplotypeScore=310.9736;InbreedingCoeff=0.9222;MQ=55.75;MQ0=11;MQRankSum=-10.095;QD=37.43;ReadPosRankSum=1.276;VQSLOD=4.1896;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:26.66:0,27,492	0/0:10,0:10:17.45:0,17,382	0/0:54,0:26:70.77:0,71,1150	0/0:47,0:18:30.45:0,30,660	0/0:18,0:18:23.24:0,23,486	1/1:4,26:30:63.21:1508,63,0	0/0:26,0:26:68.42:0,68,1985	0/0:20,0:20:57.10:0,57,1119	1/1:4,26:30:68.99:1387,69,0	0/0:29,0:30:90.20:0,90,2026	0/0:26,0:26:38.03:0,38,766	1/1:5,34:39:74.96:1568,75,0	0/0:21,0:20:38.77:0,39,952	0/0:27,0:27:28.21:0,28,746	0/0:40,0:41:77.13:0,77,1825	0/0:47,0:47:78.68:0,79,2123	0/1:16,0:16:2.22:2,0,373	0/0:10,0:10:20.14:0,20,315	0/0:30,0:30:90.16:0,90,2073	0/0:30,0:30:50.84:0,51,1052	0/0:49,0:48:38.13:0,38,837	1/1:4,33:38:81.23:1741,81,0	1/1:3,16:20:35.99:701,36,0	1/1:10,9:20:11.45:316,11,0	0/0:20,0:20:29.70:0,30,824	0/0:32,0:32:96.13:0,96,2149	0/0:29,0:29:62.22:0,62,1217	0/0:5,0:5:15.05:0,15,384
chr10	81150691	.	C	CTGTGTG	15699.68	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-9.517;DP=878;FS=5.252;HRun=0;HaplotypeScore=320.6224;InbreedingCoeff=0.8141;MQ=55.28;MQ0=11;MQRankSum=-0.767;QD=25.49;ReadPosRankSum=-0.875;VQSLOD=3.4153;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,18:35:8.91:276,9,0	1/1:3,5:12:4.67:135,5,0	0/0:57,0:27:19.04:0,19,254	0/1:46,0:18:41.34:44,0,41	1/1:7,13:23:14.21:408,14,0	0/0:30,0:30:42.98:0,43,469	0/0:26,0:27:43.89:0,44,924	1/1:24,0:24:27.08:543,27,0	0/0:30,0:30:37.32:0,37,468	1/1:17,19:40:81.21:1811,81,0	1/1:14,15:30:20.12:557,20,0	0/0:39,0:39:23.78:0,24,484	1/1:10,11:27:33.11:955,33,0	1/1:8,18:28:21.92:611,22,0	1/1:28,15:43:66.13:1891,66,0	1/1:25,28:56:69.11:2226,69,0	1/1:14,6:22:10.05:342,10,0	1/1:9,1:10:5.61:83,6,0	1/1:20,9:32:48.13:1178,48,0	1/1:14,17:34:30.10:915,30,0	1/1:44,5:51:15.11:295,15,0	0/0:38,0:38:26.65:0,27,347	0/0:20,0:20:23.85:0,24,263	0/0:21,0:21:4.44:0,4,105	1/1:8,12:24:29.29:814,29,0	1/1:27,7:35:59.44:1331,59,0	1/1:24,8:32:42.12:1144,42,0	1/1:4,1:5:6.02:141,6,0
chr10	81150975	.	T	TTG	3510.94	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.748;DP=1054;FS=0.000;HRun=0;HaplotypeScore=223.5711;InbreedingCoeff=0.9914;MQ=59.44;MQ0=1;MQRankSum=-2.744;QD=27.65;ReadPosRankSum=-3.591;VQSLOD=2.8391;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,22:50:65.69:1028,66,0	0/0:8,0:8:21.06:0,21,247	0/0:45,0:27:14.06:0,14,368	0/0:41,0:33:45.05:0,45,472	0/0:30,0:30:72.21:0,72,871	0/0:29,0:29:60.17:0,60,708	0/0:28,0:28:66.15:0,66,781	0/0:48,0:48:99:0,105,1251	0/0:50,0:50:99:0,129,1513	0/0:47,0:47:99:0,120,1454	0/0:27,0:28:69.01:0,69,786	0/0:50,0:50:99:0,126,1505	1/1:20,20:40:96.29:1386,96,0	1/1:20,16:37:75.22:1096,75,0	0/0:70,0:72:99:0,168,1992	0/0:44,0:44:99:0,105,1262	0/0:26,0:27:53.31:0,53,635	0/0:33,0:33:60.93:0,61,792	0/0:20,0:20:48.14:0,48,578	0/0:31,0:31:75.20:0,75,903	0/0:71,0:72:99:0,177,2085	0/0:28,0:28:53.41:0,53,619	0/0:25,0:25:44.72:0,45,511	0/0:54,0:54:99:0,132,1579	0/0:29,0:29:57.17:0,57,685	0/0:38,0:38:81.25:0,81,986	0/0:36,0:36:91.44:0,91,1056	0/0:14,0:14:30.09:0,30,368
chr10	81150991	.	ATG	A	5852.71	PASS	AB=0.914;AC=13;AF=0.232;AN=56;BaseQRankSum=7.253;DP=1080;FS=7.157;HRun=0;HaplotypeScore=195.1273;InbreedingCoeff=0.9010;MQ=56.42;MQ0=1;MQRankSum=5.424;QD=18.46;ReadPosRankSum=6.865;VQSLOD=3.7016;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:54:51.86:0,52,402	0/0:10,0:10:21.07:0,21,332	0/0:52,1:26:48.65:0,49,744	0/0:36,1:26:25.51:0,26,512	0/0:31,1:32:46.75:0,47,1246	1/1:3,25:29:53.92:651,54,0	0/0:33,0:33:75.05:0,75,1137	0/0:45,0:45:81.15:0,81,1241	1/1:9,42:51:96.42:1306,96,0	0/0:49,1:50:71.92:0,72,1809	0/0:30,0:30:68.25:0,68,1056	1/1:5,47:52:99:1388,111,0	0/0:10,0:47:77.10:0,77,689	0/0:10,0:43:55.79:0,56,488	0/0:66,0:66:99:0,156,2524	0/0:46,0:46:80.11:0,80,1766	0/0:28,0:28:49.45:0,49,780	0/0:32,0:32:51.99:0,52,1007	0/0:20,0:20:39.13:0,39,635	0/0:28,0:28:60.20:0,60,977	0/1:67,7:74:10.36:10,0,2321	1/1:3,26:29:57.17:698,57,0	1/1:1,23:24:42.12:525,42,0	1/1:14,44:58:99:1275,102,0	0/0:25,0:25:51.16:0,51,808	0/0:35,1:36:58.78:0,59,1438	0/0:34,2:36:12.20:0,12,1162	0/0:11,0:11:24.08:0,24,396
chr10	81153140	.	G	GTTGT	28614.18	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-7.411;DP=554;FS=5.529;HRun=0;HaplotypeScore=83.4158;InbreedingCoeff=0.9897;MQ=80.85;MQ0=0;MQRankSum=-10.173;QD=60.62;ReadPosRankSum=4.350;VQSLOD=6.3870;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:81.01:1787,81,0	1/1:1,9:11:24.97:642,25,0	0/0:30,0:29:75.21:0,75,1333	0/0:36,0:35:84.10:0,84,1471	1/1:3,15:19:33.03:715,33,0	1/1:3,17:21:48.16:1227,48,0	0/0:16,0:16:48.15:0,48,857	1/1:7,21:31:87.27:2153,87,0	1/1:5,17:23:51.13:1237,51,0	1/1:4,18:21:63.22:1665,63,0	1/1:4,9:13:35.99:779,36,0	1/1:2,10:13:30.06:737,30,0	1/1:1,17:21:45.15:1198,45,0	1/1:2,12:15:36.08:856,36,0	1/1:2,24:26:69.19:1771,69,0	1/1:1,18:20:54.19:1440,54,0	1/1:2,19:21:60.16:1540,60,0	1/1:0,6:8:18.02:420,18,0	1/1:9,8:17:48.14:1126,48,0	1/1:1,25:27:78.01:1632,78,0	1/1:2,17:19:48.08:1160,48,0	1/1:1,12:13:33.07:799,33,0	1/1:3,21:25:51.05:1164,51,0	1/1:0,11:11:24.08:641,24,0	1/1:3,11:14:39.05:911,39,0	1/1:2,15:19:57.14:1337,57,0	1/1:1,16:21:51.13:1284,51,0	1/1:1,10:12:15.05:393,15,0
chr10	81153416	.	T	TACACACACACAC	4596.20	PASS	AB=0.986;AC=26;AF=0.464;AN=56;BaseQRankSum=11.624;DP=561;FS=24.424;HRun=0;HaplotypeScore=212.8703;InbreedingCoeff=-0.6374;MQ=47.08;MQ0=4;MQRankSum=-5.648;QD=9.52;ReadPosRankSum=-3.495;VQSLOD=1.8446;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:30:10.90:11,0,399	1/1:6,0:5:2.98:22,3,0	0/0:20,0:9:10.21:0,10,268	0/0:16,0:7:15.05:0,15,244	0/1:16,0:16:99:110,0,178	0/1:20,0:19:99:151,0,222	0/0:24,0:25:63.07:0,63,1238	0/1:27,0:27:99:260,0,394	0/1:28,0:28:99:682,0,221	0/1:31,0:28:99:380,0,751	0/0:17,0:17:3:0,3,273	0/1:17,2:26:86.09:153,0,86	0/1:13,0:13:73.71:92,0,74	0/1:24,0:25:89.53:90,0,236	0/1:34,0:33:99:633,0,154	0/1:23,0:22:99:231,0,263	0/1:14,0:14:88.83:216,0,89	0/1:16,0:14:99:575,0,179	0/1:15,0:14:28.51:29,0,294	0/1:13,0:13:33.33:33,0,157	0/1:20,0:20:63.27:63,0,149	0/1:14,0:13:37.43:37,0,133	0/1:18,0:18:62.27:145,0,62	0/1:36,0:35:39.41:39,0,431	0/1:14,0:13:17.09:125,0,17	0/1:21,0:21:96.07:96,0,516	0/1:18,0:16:99:243,0,192	1/1:3,0:3:9:179,9,0
chr10	81153420	.	T	TACACACACACACACAC	9843.09	PASS	AB=1.000;AC=49;AF=0.907;AN=54;BaseQRankSum=1.911;DP=612;FS=13.837;HRun=0;HaplotypeScore=240.5298;InbreedingCoeff=0.2945;MQ=46.18;MQ0=4;MQRankSum=-2.362;QD=17.96;ReadPosRankSum=1.018;VQSLOD=1.6490;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:32:3.01:49,3,0	1/1:7,0:6:6.01:96,6,0	0/0:21,0:9:0.89:0,1,2	./.	1/1:13,0:23:3.01:168,3,0	1/1:20,0:19:15.02:373,15,0	0/0:25,0:26:36.08:0,36,921	1/1:24,0:24:36.11:640,36,0	1/1:28,0:28:27.09:1130,27,0	1/1:31,0:28:27.08:740,27,0	1/1:17,0:17:3.01:48,3,0	1/1:29,0:28:12.49:227,12,0	1/1:3,0:18:12.52:124,13,0	1/1:9,0:28:16.58:162,17,0	1/1:35,0:34:39.09:1063,39,0	1/1:16,1:27:6.02:395,6,0	1/1:12,4:21:6.91:400,7,0	1/1:15,0:13:15.05:984,15,0	1/1:17,0:16:14.24:212,14,0	1/1:14,0:14:2.79:73,3,0	0/1:24,0:24:5.58:256,0,6	1/1:13,0:12:2.79:74,3,0	1/1:17,0:17:6.02:274,6,0	1/1:35,0:34:9.03:320,9,0	1/1:9,3:16:3.01:226,3,0	1/1:16,7:31:35.61:1061,36,0	1/1:19,0:17:9.03:402,9,0	1/1:4,0:4:12.01:344,12,0
chr10	81153425	.	A	ACACACACACACACACA	6810.20	PASS	AB=1.000;AC=48;AF=0.889;AN=54;BaseQRankSum=1.149;DP=629;FS=16.550;HRun=0;HaplotypeScore=239.1540;InbreedingCoeff=0.2181;MQ=45.79;MQ0=4;MQRankSum=-2.222;QD=12.14;ReadPosRankSum=0.717;VQSLOD=2.4505;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:32:23.51:43,0,24	1/1:7,0:6:6.01:96,6,0	0/0:21,0:9:0.89:0,1,2	./.	1/1:26,0:26:3.01:168,3,0	1/1:22,0:21:12.01:147,12,0	0/0:26,0:26:36.08:0,36,921	1/1:25,0:25:39.49:611,39,0	1/1:29,0:29:18.06:286,18,0	1/1:33,0:30:24.07:560,24,0	1/1:15,0:15:3.01:48,3,0	1/1:31,0:30:12.74:228,13,0	1/1:17,0:17:12.52:124,13,0	1/1:29,0:29:16.58:162,17,0	1/1:38,0:37:27.04:431,27,0	1/1:27,0:26:6.02:395,6,0	1/1:17,0:17:9.92:637,10,0	1/1:15,0:13:6.02:276,6,0	1/1:16,0:15:14.24:154,14,0	1/1:14,0:14:3.01:74,3,0	0/1:25,0:25:6.05:256,0,6	1/1:13,0:12:3.01:75,3,0	1/1:20,0:20:3.01:48,3,0	1/1:33,0:32:8.50:319,9,0	1/1:17,0:16:3.01:226,3,0	1/1:28,0:28:35.61:1061,36,0	1/1:13,9:25:6.02:267,6,0	1/1:4,0:4:9:118,9,0
chr10	81154129	.	T	TTTTG	3513.77	PASS	AB=0.960;AC=7;AF=0.125;AN=56;BaseQRankSum=-1.662;DP=705;FS=9.465;HRun=0;HaplotypeScore=114.5290;InbreedingCoeff=0.8278;MQ=75.87;MQ0=0;MQRankSum=-3.808;QD=34.11;ReadPosRankSum=2.037;VQSLOD=3.2973;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,24:35:75.21:1739,75,0	0/0:11,0:11:21.07:0,21,347	0/0:32,0:28:12.40:0,12,315	0/0:32,0:30:47.34:0,47,761	0/0:33,0:33:72.22:0,72,1116	0/0:24,0:24:53.79:0,54,854	0/0:10,0:10:23.55:0,24,289	0/0:36,0:36:72.24:0,72,1144	0/0:29,0:29:78.27:0,78,1282	0/0:47,0:47:99:0,105,1685	0/0:15,0:15:42.11:0,42,622	0/0:15,0:15:30.09:0,30,464	1/1:10,10:20:36.12:822,36,0	1/1:9,15:24:39.13:931,39,0	0/0:23,0:23:57.19:0,57,939	0/0:25,0:25:57.19:0,57,936	0/0:41,0:41:99:0,108,1722	0/0:22,0:22:51.07:0,51,748	0/0:21,0:21:42.05:0,42,559	0/0:35,0:35:93.30:0,93,1491	0/0:18,0:18:42.10:0,42,664	0/0:20,0:20:48.15:0,48,749	0/0:21,0:21:48.14:0,48,721	0/0:22,0:22:48.15:0,48,754	0/0:22,0:22:51.17:0,51,818	0/1:23,1:24:22.43:22,0,718	0/0:25,0:25:66.23:0,66,1079	0/0:21,0:21:36.12:0,36,589
chr10	81154234	.	GT	G	6353.29	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=8.903;DP=712;FS=6.466;HRun=5;HaplotypeScore=75.9628;InbreedingCoeff=0.9999;MQ=87.76;MQ0=0;MQRankSum=-6.739;QD=30.11;ReadPosRankSum=3.759;VQSLOD=5.5120;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,40:43:99:1157,102,0	0/0:14,0:14:42.13:0,42,558	0/0:27,0:27:78.21:0,78,1009	0/0:27,0:26:72.20:0,72,937	0/0:33,0:33:90.30:0,90,1231	1/1:0,31:31:90.26:1021,90,0	0/0:21,0:21:60.20:0,60,820	0/0:36,0:36:99:0,105,1432	1/1:0,22:22:57.16:647,57,0	0/0:38,0:38:96.32:0,96,1314	0/0:25,0:25:66.18:0,66,854	1/1:0,19:19:51.15:579,51,0	1/1:0,17:17:45.13:510,45,0	1/1:0,18:18:51.14:571,51,0	0/0:30,0:30:87.27:0,87,1172	0/0:14,0:14:42.14:0,42,575	0/0:31,0:31:93.31:0,93,1272	0/0:25,0:25:72.24:0,72,985	0/0:27,0:27:72.24:0,72,984	0/0:33,0:33:96.32:0,96,1312	0/0:23,0:23:63.21:0,63,861	1/1:0,24:24:72.20:815,72,0	1/1:0,15:15:33.09:374,33,0	1/1:1,21:22:60.17:681,60,0	0/0:20,0:20:60.20:0,60,819	0/0:33,0:33:93.30:0,93,1257	0/0:23,0:23:63.21:0,63,861	0/0:21,0:21:63.18:0,63,829
chr10	81154446	.	G	GTAAGATC	9201.75	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.319;DP=747;FS=4.623;HRun=0;HaplotypeScore=172.3369;InbreedingCoeff=0.9795;MQ=80.40;MQ0=0;MQRankSum=-14.524;QD=96.86;ReadPosRankSum=0.199;VQSLOD=6.0006;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:37:90.31:3363,90,0	0/0:11,0:11:33.11:0,33,857	0/0:30,0:30:84.29:0,84,2070	0/0:21,0:21:60.17:0,60,1417	0/0:28,0:28:81.28:0,81,2061	0/0:38,0:38:99:0,108,2739	0/0:19,0:19:57.20:0,57,1438	0/0:37,0:37:99:0,108,2597	0/0:24,0:24:69.20:0,69,1589	0/0:34,0:34:99:0,99,2551	0/0:16,0:16:39.13:0,39,1013	0/0:25,0:25:69.22:0,69,1738	1/1:8,18:29:75.26:2866,75,0	1/1:5,23:29:78.27:2972,78,0	0/0:34,0:34:93.32:0,93,2342	0/0:29,0:29:84.29:0,84,2121	0/0:24,0:24:69.22:0,69,1707	0/0:21,0:21:60.21:0,60,1525	0/0:26,0:26:72.25:0,72,1847	0/0:36,0:36:99:0,105,2645	0/0:47,0:47:99:0,138,3468	0/0:19,0:19:54.19:0,54,1392	0/0:26,0:26:75.19:0,75,1745	0/0:26,0:26:78.20:0,78,1860	0/0:19,0:19:54.19:0,54,1403	0/0:34,0:34:93.30:0,93,2362	0/0:25,0:25:75.24:0,75,1883	0/0:3,0:3:9.03:0,9,234
chr10	81154710	.	TC	T	13459.35	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=11.752;DP=720;FS=3.592;HRun=2;HaplotypeScore=75.4311;InbreedingCoeff=0.9992;MQ=94.11;MQ0=1;MQRankSum=-5.484;QD=34.25;ReadPosRankSum=2.417;VQSLOD=5.4002;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,165,2399	1/1:0,10:10:27.09:351,27,0	0/0:34,0:34:74.80:0,75,1155	0/0:42,0:39:99:0,109,1432	1/1:0,29:29:75.20:954,75,0	0/0:24,0:24:69.22:0,69,1014	0/0:20,0:20:60.18:0,60,858	1/1:1,42:43:99:1591,126,0	0/0:27,0:27:81.27:0,81,1211	1/1:1,19:20:57.16:708,57,0	1/1:0,22:22:60.11:757,60,0	0/0:30,0:30:90.24:0,90,1263	0/0:15,0:15:45.13:0,45,634	0/0:23,0:23:63.16:0,63,889	1/1:0,25:25:60.20:779,60,0	1/1:1,27:28:36.30:968,36,0	1/1:1,21:22:57.19:739,57,0	1/1:0,12:12:33.11:428,33,0	1/1:0,28:28:81.24:1023,81,0	1/1:0,34:34:96.21:1204,96,0	1/1:1,32:33:72.23:935,72,0	0/0:16,0:16:42.13:0,42,611	0/0:23,0:23:69.19:0,69,1009	0/0:18,0:18:51.17:0,51,759	1/1:0,29:29:72.23:935,72,0	1/1:0,23:23:66.20:842,66,0	1/1:1,27:28:75.24:974,75,0	1/1:0,7:7:21.07:273,21,0
chr10	81155757	.	A	AT	1840.50	PASS	AB=0.909;AC=7;AF=0.125;AN=56;BaseQRankSum=-9.236;DP=537;FS=4.713;HRun=8;HaplotypeScore=55.8255;InbreedingCoeff=0.8053;MQ=77.22;MQ0=0;MQRankSum=-0.463;QD=22.45;ReadPosRankSum=-0.320;VQSLOD=4.0529;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,30:35:81.07:915,81,0	0/0:10,0:10:30:0,30,270	0/0:16,0:15:35.36:0,35,301	0/0:13,0:13:25.14:0,25,192	0/0:14,0:14:33:0,33,302	0/0:20,0:20:27.80:0,28,199	0/0:9,0:9:27.01:0,27,247	0/0:32,0:32:78.03:0,78,711	0/0:8,0:8:16.64:0,17,77	0/0:21,0:21:57.03:0,57,522	0/0:17,0:17:35.99:0,36,326	0/1:9,1:10:44.82:58,0,45	1/1:4,16:20:45.18:601,45,0	1/1:2,15:17:36.11:415,36,0	0/0:18,0:18:48.02:0,48,439	0/0:24,0:24:63.01:0,63,572	0/0:22,0:23:62:0,62,537	0/0:23,0:23:54.02:0,54,494	0/0:22,0:22:51:0,51,463	0/0:24,0:24:65.86:0,66,590	0/0:19,0:19:51:0,51,463	0/0:15,0:15:36.28:0,36,166	0/0:22,0:22:7.08:0,7,210	0/0:14,0:14:33.45:0,33,155	0/0:20,0:20:60.01:0,60,542	0/0:23,0:23:60.02:0,60,549	0/0:39,0:39:99:0,105,961	0/0:9,0:9:14.99:0,15,137
chr10	81157000	.	AT	A	12047.05	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=1.021;DP=548;FS=12.105;HRun=7;HaplotypeScore=57.8347;InbreedingCoeff=0.9853;MQ=58.13;MQ0=0;MQRankSum=2.333;QD=26.36;ReadPosRankSum=1.729;VQSLOD=4.8128;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:90.25:0,90,1114	1/1:0,6:6:18.04:183,18,0	0/0:6,0:3:9.03:0,9,113	0/0:9,0:8:21.06:0,21,254	1/1:2,28:30:81.18:826,81,0	1/1:2,25:27:75.17:765,75,0	0/0:11,0:11:33.06:0,33,397	1/1:5,19:24:51.04:496,51,0	1/1:1,22:23:54.12:551,54,0	1/1:0,25:25:75.14:750,75,0	1/1:2,17:19:48.11:490,48,0	1/1:0,15:15:45.10:459,45,0	0/0:16,0:16:42.12:0,42,514	0/0:14,0:14:39.10:0,39,458	1/1:1,13:14:30.07:306,30,0	1/1:0,22:22:63.14:643,63,0	1/1:0,27:27:69.16:704,69,0	1/1:6,13:19:36.08:367,36,0	1/1:1,20:21:57.13:581,57,0	1/1:1,25:26:69.15:702,69,0	1/1:3,12:15:36.08:367,36,0	1/1:1,14:15:39.09:398,39,0	1/1:1,18:19:45.10:459,45,0	1/1:1,13:14:36.08:367,36,0	1/1:2,27:29:69.16:704,69,0	1/1:0,22:22:66.15:673,66,0	1/1:1,31:32:90.17:918,90,0	1/1:0,13:13:33.08:337,33,0
chr10	81157508	.	AT	A	8876.77	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=7.774;DP=424;FS=8.981;HRun=7;HaplotypeScore=51.1143;InbreedingCoeff=0.8580;MQ=68.25;MQ0=3;MQRankSum=-2.026;QD=25.08;ReadPosRankSum=3.208;VQSLOD=5.0590;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,39:41:99:1163,114,0	1/1:1,8:9:21.05:214,21,0	0/1:16,0:11:14.04:14,0,202	0/0:10,0:8:10.63:0,11,81	1/1:1,31:32:93.20:944,93,0	0/0:18,0:18:51.14:0,51,626	0/0:5,0:5:15.04:0,15,176	1/1:4,22:25:66.12:660,66,0	0/0:12,0:12:30.10:0,30,377	1/1:3,17:20:51.11:520,51,0	1/1:0,19:19:57.12:578,57,0	0/0:9,0:9:24.08:0,24,302	1/1:1,8:9:21.05:214,21,0	1/1:1,5:6:15.03:153,15,0	1/1:0,13:13:33.08:337,33,0	1/1:0,12:12:33.08:337,33,0	1/1:3,24:27:60.13:607,60,0	1/1:2,14:16:39.08:398,39,0	1/1:2,10:12:33.06:330,33,0	1/1:3,20:23:57.11:572,57,0	1/1:0,1:1:3.01:31,3,0	0/0:5,0:5:15.03:0,15,175	0/0:5,0:5:9.03:0,9,113	0/0:5,0:5:12.04:0,12,151	1/1:2,24:26:60.13:612,60,0	1/1:1,14:15:42.10:428,42,0	1/1:1,23:24:60.13:612,60,0	1/1:1,5:6:15.03:153,15,0
chr10	81158123	.	T	TG	5473.44	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-12.319;DP=672;FS=10.561;HRun=1;HaplotypeScore=64.1701;InbreedingCoeff=0.9999;MQ=69.08;MQ0=1;MQRankSum=-1.553;QD=37.49;ReadPosRankSum=3.620;VQSLOD=4.8824;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1355	0/0:11,0:11:33.11:0,33,428	0/0:25,0:24:72.20:0,72,876	0/0:23,0:21:60.18:0,60,744	0/0:19,0:19:54.16:0,54,686	1/1:0,21:21:57.19:854,57,0	0/0:30,0:30:87.25:0,87,1101	0/0:31,0:31:87.27:0,87,1117	1/1:2,24:26:69.23:1017,69,0	0/0:23,0:23:66.21:0,66,846	0/0:11,0:11:33.11:0,33,424	1/1:0,26:26:66.22:988,66,0	0/0:14,0:14:42.14:0,42,544	0/0:17,0:17:47.95:0,48,590	0/0:23,0:23:69.20:0,69,867	0/0:17,0:17:51.17:0,51,662	0/0:32,0:31:93.29:0,93,1190	0/0:34,0:34:99:0,102,1305	0/0:23,0:23:69.21:0,69,871	0/0:27,0:27:78.25:0,78,1012	0/0:45,0:44:99:0,132,1697	1/1:0,22:22:48.08:684,48,0	1/1:0,17:17:44.91:672,45,0	1/1:0,34:34:84.28:1258,84,0	0/0:14,0:14:42.14:0,42,545	0/0:29,0:29:87.28:0,87,1129	0/0:23,0:23:66.20:0,66,842	0/0:16,0:16:42.14:0,42,540
chr10	81158952	.	AAC	A	3559.23	PASS	AB=0.922;AC=15;AF=0.268;AN=56;BaseQRankSum=7.839;DP=594;FS=9.420;HRun=0;HaplotypeScore=85.9724;InbreedingCoeff=0.6503;MQ=65.45;MQ0=8;MQRankSum=2.287;QD=19.03;ReadPosRankSum=2.968;VQSLOD=3.5359;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:24:18.67:0,19,106	0/0:5,0:5:15.03:0,15,219	0/1:30,2:15:32.14:32,0,298	0/0:30,1:22:2.09:0,2,414	0/0:22,0:22:55.43:0,55,859	1/1:2,18:20:51.16:628,51,0	0/0:17,0:17:39.13:0,39,636	0/0:32,0:32:48.37:0,48,1003	1/1:1,21:23:54.17:665,54,0	0/0:19,0:19:57.19:0,57,906	0/0:20,2:22:23.25:0,23,859	1/1:3,16:19:50.90:603,51,0	0/0:3,0:18:32.99:0,33,290	0/0:6,0:21:38.07:0,38,298	0/0:19,1:20:20.26:0,20,842	0/0:14,1:15:5.21:0,5,599	0/0:20,0:20:43.03:0,43,669	0/1:10,1:10:18.86:19,0,221	0/0:17,0:17:29.58:0,30,427	0/0:26,1:27:32.30:0,32,1022	0/0:25,0:25:57.17:0,57,903	1/1:3,13:16:36.07:426,36,0	1/1:4,16:21:44.97:531,45,0	1/1:5,19:25:54:642,54,0	0/0:29,0:29:81.28:0,81,1319	0/1:18,2:20:13.68:14,0,797	0/0:30,0:29:78.27:0,78,1269	0/0:12,1:13:2.20:0,2,548
chr10	81159107	.	T	TA	20214.48	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-4.955;DP=516;FS=1.340;HRun=0;HaplotypeScore=59.5086;InbreedingCoeff=0.9930;MQ=82.74;MQ0=0;MQRankSum=-6.416;QD=42.38;ReadPosRankSum=4.169;VQSLOD=5.3729;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,20:25:63.19:976,63,0	1/1:0,14:14:39.13:624,39,0	0/0:16,0:16:45.15:0,45,628	0/0:12,0:13:36.12:0,36,503	1/1:0,30:30:81.28:1294,81,0	1/1:1,23:24:63.21:1007,63,0	0/0:10,0:10:30.07:0,30,400	1/1:0,28:28:84.27:1311,84,0	1/1:0,13:13:36.12:575,36,0	1/1:2,23:25:69.23:1103,69,0	1/1:0,22:22:60.20:959,60,0	1/1:0,9:9:21.07:336,21,0	1/1:1,18:19:39.13:623,39,0	1/1:0,13:13:30.10:479,30,0	1/1:0,21:21:48.16:767,48,0	1/1:0,12:12:21.07:336,21,0	1/1:0,24:24:72.25:1151,72,0	1/1:0,17:17:42.14:671,42,0	1/1:0,19:19:57.19:909,57,0	1/1:1,33:34:90.31:1439,90,0	1/1:0,18:18:54.18:863,54,0	1/1:1,18:19:48.16:767,48,0	1/1:0,22:22:60.01:959,60,0	1/1:0,8:8:24.08:384,24,0	1/1:0,6:6:18.06:288,18,0	1/1:1,17:18:51.17:816,51,0	1/1:1,21:22:60.20:953,60,0	1/1:1,14:15:39.13:623,39,0
chr10	81159249	.	ATT	A	12365.53	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-2.379;DP=535;FS=2.632;HRun=11;HaplotypeScore=81.2374;InbreedingCoeff=0.9456;MQ=76.00;MQ0=3;MQRankSum=-2.038;QD=25.76;ReadPosRankSum=3.843;VQSLOD=5.1361;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:63.15:670,63,0	1/1:1,6:7:15.03:160,15,0	0/0:22,0:16:11.78:0,12,214	0/0:18,0:13:7.56:0,8,193	1/1:2,22:24:66.15:701,66,0	1/1:2,21:23:63.07:646,63,0	0/0:13,0:14:33.11:0,33,486	1/1:2,19:21:57.14:606,57,0	1/1:2,10:12:29.95:306,30,0	1/1:6,23:29:69.15:733,69,0	1/1:3,21:24:59.92:612,60,0	1/1:2,14:16:36.05:371,36,0	1/1:2,26:28:66.14:702,66,0	1/1:1,18:18:51.13:543,51,0	1/1:4,17:21:54.90:603,55,0	1/1:5,13:18:36.08:383,36,0	1/1:2,22:24:57.14:607,57,0	1/1:4,22:26:41.10:587,41,0	1/1:1,14:15:42.10:446,42,0	1/1:1,15:16:42.08:441,42,0	1/1:0,13:13:33.08:351,33,0	1/1:0,11:11:27.01:275,27,0	1/1:1,14:15:33.45:340,33,0	1/1:4,9:14:21:211,21,0	1/1:0,20:20:48.12:510,48,0	1/1:1,23:24:69.16:729,69,0	1/1:2,24:27:65.90:683,66,0	1/1:5,3:8:15.01:151,15,0
chr10	81160135	.	AT	A	9214.78	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=11.782;DP=586;FS=16.134;HRun=10;HaplotypeScore=83.7383;InbreedingCoeff=0.9077;MQ=78.06;MQ0=0;MQRankSum=-1.824;QD=20.80;ReadPosRankSum=1.020;VQSLOD=4.1324;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:26:59.98:521,60,0	1/1:2,15:17:44.99:391,45,0	0/0:21,0:20:18.50:0,19,185	0/1:10,0:10:8.76:9,0,50	1/1:2,25:27:71.97:625,72,0	0/0:24,0:24:63.16:0,63,688	0/0:14,1:15:13.03:0,13,361	1/1:7,37:45:99:955,113,0	0/0:13,0:13:36.10:0,36,398	1/1:4,27:31:80.96:700,81,0	1/1:4,24:29:34.82:520,35,0	0/0:18,0:19:54.11:0,54,584	1/1:2,11:13:32.98:286,33,0	1/1:1,12:13:35.98:313,36,0	1/1:3,16:19:41.99:365,42,0	1/1:2,14:16:35.98:312,36,0	1/1:2,17:19:44.99:390,45,0	1/1:1,9:10:21:182,21,0	1/1:4,13:17:38.98:339,39,0	1/1:3,30:33:83.96:729,84,0	1/1:2,11:13:32.99:287,33,0	0/0:20,0:20:48.13:0,48,531	0/0:19,2:21:8.09:0,8,521	0/0:10,0:10:27.07:0,27,299	1/1:2,13:15:35.99:313,36,0	1/1:4,30:34:89.98:781,90,0	1/1:4,31:35:92.98:807,93,0	1/1:4,17:21:44.95:391,45,0
chr10	81161302	.	G	GT	12753.72	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=12.592;DP=505;FS=10.991;HRun=0;HaplotypeScore=285.9365;InbreedingCoeff=0.9769;MQ=86.95;MQ0=0;MQRankSum=-12.857;QD=29.80;ReadPosRankSum=6.053;VQSLOD=1.9878;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:17:47.71:471,48,0	1/1:0,8:8:24.05:250,24,0	0/0:33,0:33:98.27:0,98,1263	0/0:20,0:20:57.17:0,57,762	1/1:3,14:17:50.03:475,50,0	1/1:4,25:29:87.16:921,87,0	0/0:24,0:24:66.21:0,66,902	1/1:2,10:12:36.10:410,36,0	1/1:0,13:13:36.05:352,36,0	1/1:0,34:34:99:1133,102,0	1/1:2,19:21:57.08:577,57,0	1/1:2,18:20:60.08:585,60,0	1/1:2,27:29:84.18:890,84,0	1/1:2,14:16:48.04:456,48,0	1/1:2,27:29:87.19:926,87,0	1/1:2,10:12:36.08:399,36,0	1/1:0,7:7:14.37:139,14,0	1/1:0,6:6:15.04:165,15,0	1/1:1,9:10:30.06:314,30,0	1/1:4,15:18:54.06:540,54,0	1/1:0,5:5:14.98:135,15,0	1/1:1,16:16:45.95:458,46,0	1/1:3,18:21:62.99:608,63,0	1/1:2,7:9:17.92:153,18,0	1/1:0,25:24:72.09:712,72,0	1/1:2,22:24:72.17:764,72,0	1/1:2,19:21:63.14:687,63,0	1/1:0,7:7:21.06:234,21,0
chr10	81161307	.	TAGGA	T	14255.44	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=12.528;DP=480;FS=12.491;HRun=0;HaplotypeScore=302.7036;InbreedingCoeff=0.9662;MQ=89.00;MQ0=0;MQRankSum=-12.869;QD=35.46;ReadPosRankSum=8.189;VQSLOD=3.0546;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:16:27.82:447,28,0	1/1:0,8:8:24.08:311,24,0	0/0:33,0:33:71.61:0,72,2081	0/0:22,0:22:62.97:0,63,1482	1/1:2,14:16:10.78:370,11,0	1/1:3,25:28:78.21:974,78,0	0/0:23,0:23:66.23:0,66,1808	1/1:1,10:11:30.10:431,30,0	1/1:0,13:13:36.11:444,36,0	1/1:1,33:34:99:1443,102,0	1/1:0,19:19:48.15:598,48,0	1/1:0,18:18:54.17:667,54,0	1/1:1,26:27:81.24:1030,81,0	1/1:0,14:14:42.13:512,42,0	1/1:2,27:29:84.25:1037,84,0	1/1:2,10:12:30.10:386,30,0	1/1:0,7:7:18.47:194,18,0	1/1:0,6:6:17.97:226,18,0	1/1:0,9:9:27.08:364,27,0	1/1:0,15:14:42.13:530,42,0	1/1:0,5:5:15.03:163,15,0	1/1:0,16:15:41.49:491,41,0	1/1:0,18:18:53.37:647,53,0	1/1:0,7:7:14.94:159,15,0	1/1:0,25:24:71.80:867,72,0	1/1:0,22:22:66.22:902,66,0	1/1:1,19:20:57.19:772,57,0	1/1:0,7:7:21.07:290,21,0
chr10	81161315	.	TACC	T	20877.15	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=13.194;DP=492;FS=1.483;HRun=0;HaplotypeScore=270.6055;InbreedingCoeff=0.9833;MQ=87.01;MQ0=0;MQRankSum=-13.608;QD=50.43;ReadPosRankSum=8.517;VQSLOD=4.3868;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:46.71:804,47,0	1/1:0,8:8:24.08:432,24,0	0/0:30,0:30:87.30:0,87,2050	0/0:21,0:21:63.22:0,63,1454	1/1:0,14:14:38.58:601,39,0	1/1:0,25:25:75.26:1348,75,0	0/0:27,0:27:81.28:0,81,1956	1/1:0,13:13:39.11:660,39,0	1/1:1,13:14:39.13:700,39,0	1/1:0,35:35:99:1929,105,0	1/1:0,20:20:48.16:852,48,0	1/1:0,18:18:54.19:966,54,0	1/1:1,26:27:81.28:1428,81,0	1/1:1,14:15:45.15:808,45,0	1/1:0,27:27:81.28:1445,81,0	1/1:0,14:14:33.11:597,33,0	1/1:0,7:7:21.06:311,21,0	1/1:0,7:7:21.07:382,21,0	1/1:0,9:9:27.09:493,27,0	1/1:0,15:14:42.14:755,42,0	1/1:0,5:5:15.05:265,15,0	1/1:0,18:17:42.14:748,42,0	1/1:0,21:21:57.18:986,57,0	1/1:0,7:7:15.05:265,15,0	1/1:3,25:27:78.25:1370,78,0	1/1:0,24:24:72.25:1317,72,0	1/1:0,19:19:57.20:1034,57,0	1/1:0,7:7:21.07:381,21,0
chr10	81163208	.	C	CA	18965.23	PASS	AB=0.829;AC=52;AF=0.963;AN=54;BaseQRankSum=0.036;DP=557;FS=8.938;HRun=1;HaplotypeScore=346.8126;InbreedingCoeff=-0.0407;MQ=44.53;MQ0=0;MQRankSum=-3.425;QD=34.05;ReadPosRankSum=2.384;VQSLOD=2.2829;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:33:75.21:1096,75,0	1/1:0,6:6:15.01:199,15,0	0/1:5,1:6:32.41:58,0,32	0/1:3,1:4:35.57:36,0,36	1/1:6,22:28:41.88:553,42,0	1/1:7,17:24:51.09:713,51,0	1/1:4,19:23:54.11:759,54,0	1/1:6,27:33:90.24:1300,90,0	1/1:2,24:26:72.05:955,72,0	1/1:3,28:31:90.30:1341,90,0	1/1:3,11:14:27.05:379,27,0	1/1:3,23:26:63.09:868,63,0	1/1:3,20:23:66.12:914,66,0	1/1:3,24:27:69.12:959,69,0	1/1:6,29:35:90.12:1225,90,0	1/1:4,21:24:72.07:957,72,0	1/1:0,15:15:36.12:538,36,0	1/1:0,5:5:15.05:224,15,0	1/1:5,15:20:51.11:717,51,0	1/1:2,20:22:59.94:748,60,0	1/1:1,6:7:11.95:129,12,0	1/1:2,14:16:39:508,39,0	1/1:2,21:23:47.95:593,48,0	1/1:1,12:13:24.04:334,24,0	1/1:1,22:23:60.03:798,60,0	1/1:3,18:21:63.21:931,63,0	1/1:3,25:28:78.22:1135,78,0	./.
chr10	81164185	.	A	AGTGTGT	5545.15	PASS	AB=1.000;AC=33;AF=0.635;AN=52;BaseQRankSum=0.901;DP=546;FS=0.491;HRun=0;HaplotypeScore=127.1504;InbreedingCoeff=0.8730;MQ=69.51;MQ0=5;MQRankSum=-4.478;QD=15.98;ReadPosRankSum=-4.887;VQSLOD=2.7617;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:23:6.19:6,0,463	1/1:8,0:8:17.88:275,18,0	./.	./.	1/1:3,7:12:17.95:322,18,0	0/0:18,0:21:16.13:0,16,557	0/0:14,0:14:27.08:0,27,507	1/1:41,0:40:35.21:402,35,0	0/0:18,0:18:35.30:0,35,605	1/1:8,11:24:42.08:753,42,0	1/1:11,7:24:10.91:103,11,0	0/0:14,0:14:32.47:0,32,593	0/0:15,0:16:35.47:0,35,622	0/0:13,0:16:45:0,45,747	1/1:6,10:19:24.07:464,24,0	1/1:4,11:17:15.05:429,15,0	1/1:12,10:26:14.52:226,15,0	1/1:10,3:15:6.91:198,7,0	1/1:15,5:20:25.48:445,25,0	1/1:8,2:18:23.85:240,24,0	1/1:25,0:25:29.46:475,29,0	0/0:13,0:15:27.09:0,27,517	0/0:9,0:13:18.05:0,18,315	0/0:14,0:15:15.79:0,16,590	1/1:3,18:24:18.06:342,18,0	1/1:4,6:16:32.81:532,33,0	1/1:9,11:21:6.07:183,6,0	1/1:8,1:10:8.90:151,9,0
chr10	81164684	.	T	TA	8076.10	PASS	AB=0.944;AC=54;AF=0.964;AN=56;BaseQRankSum=4.083;DP=282;FS=10.477;HRun=1;HaplotypeScore=306.8720;InbreedingCoeff=-0.0514;MQ=63.12;MQ0=0;MQRankSum=-4.099;QD=28.64;ReadPosRankSum=2.949;VQSLOD=2.3322;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:6.01:59,6,0	1/1:0,5:5:15.01:142,15,0	0/1:12,0:11:19.84:20,0,62	0/1:7,1:4:34.23:34,0,56	1/1:0,20:20:56.94:612,57,0	1/1:1,6:7:20.60:190,21,0	1/1:0,2:2:6.01:58,6,0	1/1:0,10:10:28.33:380,28,0	1/1:0,14:14:42.05:437,42,0	1/1:1,15:16:44.91:456,45,0	1/1:0,13:13:38.91:342,39,0	1/1:0,8:8:23.99:230,24,0	1/1:0,16:16:44.97:434,45,0	1/1:0,9:9:27.02:274,27,0	1/1:0,7:7:21.03:208,21,0	1/1:0,10:10:30.04:315,30,0	1/1:0,6:6:18.02:170,18,0	1/1:0,1:1:3.01:48,3,0	1/1:0,8:8:23.97:303,24,0	1/1:0,21:21:63.01:658,63,0	1/1:0,3:3:9.01:86,9,0	1/1:1,19:20:60.03:622,60,0	1/1:0,9:9:26.99:275,27,0	1/1:0,5:5:12:107,12,0	1/1:0,17:17:51.02:479,51,0	1/1:0,13:13:39.08:433,39,0	1/1:0,17:17:51.10:607,51,0	1/1:0,3:3:9.02:96,9,0
chr10	81164690	.	AG	A	1942.58	PASS	AB=1.000;AC=52;AF=0.929;AN=56;BaseQRankSum=1.724;DP=284;FS=6.601;HRun=1;HaplotypeScore=329.1302;InbreedingCoeff=0.0967;MQ=66.41;MQ0=0;MQRankSum=-0.386;QD=6.86;ReadPosRankSum=6.580;VQSLOD=0.6260;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:5.17:20,5,0	1/1:0,5:5:12.76:49,13,0	0/1:13,0:12:19.58:20,0,203	0/1:9,0:5:31.23:43,0,31	1/1:5,15:20:24.75:97,25,0	1/1:2,5:7:6.37:40,6,0	1/1:0,2:2:5.09:19,5,0	1/1:7,3:10:10.97:62,11,0	1/1:2,12:14:30.65:118,31,0	1/1:3,13:16:22.57:148,23,0	1/1:0,13:13:25.20:88,25,0	1/1:2,6:8:17.07:59,17,0	1/1:2,14:16:29.18:113,29,0	1/1:1,8:9:18.84:72,19,0	1/1:1,6:7:17.55:66,18,0	1/1:2,8:10:22.47:89,22,0	1/1:0,6:6:15.15:57,15,0	0/0:1,0:1:0:0,0,0	1/1:5,3:8:9.91:46,10,0	1/1:5,16:21:35.84:137,36,0	1/1:0,3:3:7.59:29,8,0	1/1:5,15:20:35.63:128,36,0	1/1:2,7:9:15.48:56,15,0	1/1:0,5:5:12.30:51,12,0	1/1:1,16:17:42.54:158,43,0	1/1:3,10:13:28.32:120,28,0	1/1:6,11:17:28.73:121,29,0	1/1:0,3:3:8.34:38,8,0
chr10	81165373	.	TACACACACAC	T	3010.84	PASS	AC=28;AF=0.609;AN=46;BaseQRankSum=0.035;DP=433;FS=0.000;HRun=0;HaplotypeScore=139.0257;InbreedingCoeff=0.6899;MQ=69.91;MQ0=8;MQRankSum=-4.223;QD=15.05;ReadPosRankSum=-0.658;VQSLOD=2.1669;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:26:2.67:69,3,0	1/1:6,0:6:3:36,3,0	./.	0/0:40,0:25:1.25:0,1,3	1/1:14,1:16:11.70:172,12,0	0/0:13,0:21:26.22:0,26,397	0/0:21,0:20:12.04:0,12,536	0/0:18,0:16:0:0,0,1	0/0:10,0:14:15.05:0,15,255	1/1:14,5:19:15.05:445,15,0	1/1:12,0:12:3.01:59,3,0	0/0:10,0:11:9.03:0,9,261	1/1:8,0:14:11.63:263,12,0	1/1:5,0:12:6.91:142,7,0	1/1:11,9:20:8.90:193,9,0	1/1:8,5:13:12.04:356,12,0	./.	./.	1/1:6,2:8:6.02:178,6,0	1/1:7,6:14:11.91:337,12,0	./.	0/0:9,0:11:5.26:0,5,145	0/0:6,0:10:6.02:0,6,101	0/0:17,0:20:24.06:0,24,478	1/1:9,3:13:6.02:159,6,0	1/1:8,5:13:11.97:356,12,0	1/1:7,4:12:18.04:409,18,0	./.
chr10	81165442	.	AAG	A	81.70	PASS	AB=0.970;AC=13;AF=0.241;AN=54;BaseQRankSum=1.115;DP=493;FS=7.905;HRun=0;HaplotypeScore=111.5689;InbreedingCoeff=0.3829;MQ=44.36;MQ0=16;MQRankSum=1.419;QD=0.47;ReadPosRankSum=-1.808;VQSLOD=1.3315;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,12:26:11.98:131,12,0	1/1:4,0:4:0.47:1,0,0	./.	0/1:36,0:8:0:0,0,0	1/1:13,0:14:0.14:1,0,0	0/0:16,0:16:12.97:0,13,176	0/1:22,0:22:40.93:41,0,227	0/0:27,0:25:4.97:0,5,19	0/0:17,0:18:17.50:0,17,132	0/0:21,0:20:16.50:0,16,200	0/0:9,0:9:0.47:0,0,1	0/0:21,0:22:8.27:0,8,75	1/1:24,0:24:1.63:12,2,0	0/1:14,0:17:0.01:0,0,0	0/0:19,0:20:8.25:0,8,72	0/0:13,0:14:10.98:0,11,89	0/0:10,0:9:2.74:0,3,12	0/0:10,0:10:12.47:0,12,120	0/0:13,0:14:17.99:0,18,175	0/1:14,0:14:0.03:0,0,0	0/0:9,0:15:3.09:0,3,27	0/0:18,0:17:6.69:0,7,56	0/0:10,0:11:5.03:0,5,51	0/1:15,0:15:0.55:1,0,20	0/0:18,0:18:9:0,9,79	0/0:20,0:20:20.99:0,21,212	0/0:11,0:18:11.69:0,12,116	0/0:8,0:8:6:0,6,60
chr10	81166179	.	G	GTT	9868.87	PASS	AB=0.534;AC=36;AF=0.643;AN=56;BaseQRankSum=-10.397;DP=606;FS=20.458;HRun=9;HaplotypeScore=134.2961;InbreedingCoeff=0.8007;MQ=70.01;MQ0=2;MQRankSum=1.910;QD=21.41;ReadPosRankSum=-0.212;VQSLOD=2.1854;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:3,0:30:2.70:131,0,3	1/1:0,5:5:12.04:185,12,0	0/0:14,0:13:20.04:0,20,196	0/0:15,0:13:2.13:0,2,61	1/1:5,29:34:84.20:1233,84,0	0/0:0,0:22:57.64:0,58,246	0/0:12,0:12:33.08:0,33,351	1/1:6,0:35:73.07:268,73,0	0/0:0,0:6:16.47:0,16,70	1/1:3,19:23:59.69:880,60,0	1/1:11,24:37:71.05:1036,71,0	0/0:0,0:13:32.93:0,33,141	1/1:3,0:24:41.05:140,41,0	1/1:2,0:20:1.89:93,2,0	1/1:3,23:26:57.19:870,57,0	1/1:3,0:17:39.07:378,39,0	1/1:1,31:32:84.29:1293,84,0	1/1:3,18:21:51.17:785,51,0	1/1:4,1:19:6.53:126,7,0	1/1:3,0:24:18.97:143,19,0	1/1:4,0:22:13.50:114,14,0	0/0:0,0:9:24.70:0,25,105	0/0:1,0:24:57.56:0,58,245	0/0:2,0:29:63.12:0,63,269	1/1:1,13:16:39.13:600,39,0	1/1:5,22:31:76.38:1058,76,0	0/1:5,0:33:5.68:123,0,6	1/1:0,12:12:27.09:416,27,0
chr10	81167111	.	G	GT	12708.62	PASS	AB=0.615;AC=37;AF=0.661;AN=56;BaseQRankSum=-12.704;DP=637;FS=4.612;HRun=7;HaplotypeScore=58.3478;InbreedingCoeff=0.8776;MQ=74.34;MQ0=0;MQRankSum=-0.835;QD=28.56;ReadPosRankSum=0.321;VQSLOD=5.5332;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:15:33.10:399,33,0	1/1:1,24:25:63.18:761,63,0	0/0:17,0:16:4.50:0,4,225	0/0:9,0:9:3.26:0,3,72	1/1:1,31:32:84.15:970,84,0	0/0:27,0:27:75.12:0,75,724	0/0:20,0:20:48.06:0,48,463	1/1:6,24:30:72.22:869,72,0	0/0:20,0:20:57.09:0,57,550	1/1:2,34:36:99:1175,99,0	1/1:5,21:26:60.14:708,60,0	0/0:22,0:22:60.09:0,60,579	1/1:1,15:16:39.11:463,39,0	1/1:4,15:20:48.01:556,48,0	1/1:4,26:30:57.17:689,57,0	1/1:2,15:18:41.99:486,42,0	1/1:1,21:22:48.15:580,48,0	1/1:2,16:18:29.96:341,30,0	1/1:1,20:21:60.18:725,60,0	1/1:1,37:38:99:1234,105,0	1/1:2,12:14:36.11:435,36,0	0/0:30,0:30:75.06:0,75,707	0/0:29,0:29:81.12:0,81,778	0/0:18,0:18:51.06:0,51,487	1/1:2,16:18:44.20:574,44,0	1/1:2,23:25:69.21:833,69,0	1/1:5,27:32:63.18:749,63,0	0/1:3,5:8:10.92:163,0,11
chr10	81167525	.	G	GTTT	5887.28	PASS	AB=0.531;AC=31;AF=0.554;AN=56;BaseQRankSum=15.035;DP=640;FS=15.042;HRun=9;HaplotypeScore=207.2035;InbreedingCoeff=0.9461;MQ=63.14;MQ0=0;MQRankSum=-8.372;QD=16.58;ReadPosRankSum=-1.106;VQSLOD=0.5078;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:44:99:0,104,1311	1/1:3,0:10:20.92:161,21,0	0/0:21,0:20:43.35:0,43,514	0/0:13,0:13:23.22:0,23,325	1/1:5,0:30:66.85:490,67,0	0/0:21,0:21:63.20:0,63,796	0/0:26,0:26:60.16:0,60,756	1/1:9,0:28:55.34:420,55,0	0/0:21,0:21:63.20:0,63,792	1/1:9,0:30:60.53:479,61,0	1/1:1,0:32:77.21:578,77,0	0/0:14,0:14:42.13:0,42,530	0/0:30,0:30:81.15:0,81,989	0/0:20,0:20:57.18:0,57,720	1/1:6,0:25:50.79:388,51,0	0/1:2,0:16:3.77:198,0,4	1/1:3,0:14:32.87:252,33,0	1/1:4,0:17:36.80:268,37,0	1/1:3,0:15:32.88:256,33,0	1/1:11,0:39:84.50:636,84,0	1/1:3,0:12:26.89:206,27,0	0/0:32,0:32:75.14:0,75,947	0/0:20,0:20:54.13:0,54,669	0/0:22,0:22:60.18:0,60,758	1/1:3,1:22:44.85:380,45,0	1/1:6,1:24:56.74:466,57,0	1/1:3,1:30:73.28:587,73,0	1/1:1,0:8:16.20:123,16,0
chr10	81168744	.	CATGTT	C	22525.87	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=15.637;DP=648;FS=5.246;HRun=0;HaplotypeScore=134.6639;InbreedingCoeff=0.9989;MQ=85.13;MQ0=0;MQRankSum=-8.992;QD=52.63;ReadPosRankSum=4.726;VQSLOD=5.3243;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,36:40:90.18:1786,90,0	1/1:0,8:8:24.08:512,24,0	0/0:29,0:29:78.27:0,78,2333	0/0:18,0:18:48.16:0,48,1450	1/1:2,24:26:63.22:1342,63,0	0/0:23,0:23:69.24:0,69,2103	0/0:28,0:28:81.28:0,81,2498	1/1:5,17:22:51.18:1087,51,0	0/0:28,0:28:84.29:0,84,2587	1/1:5,26:31:75.22:1554,75,0	1/1:0,23:23:60.21:1278,60,0	0/0:22,0:22:66.22:0,66,1998	1/1:2,32:34:87.30:1854,87,0	1/1:1,22:23:66.23:1407,66,0	1/1:0,25:25:60.21:1279,60,0	1/1:2,18:20:51.12:1005,51,0	1/1:1,21:22:54.19:1151,54,0	1/1:0,8:8:21.07:448,21,0	1/1:3,14:17:42.13:849,42,0	1/1:0,25:25:69.24:1471,69,0	1/1:2,27:29:63.07:1343,63,0	0/0:16,0:16:48.16:0,48,1501	0/0:21,0:21:63.20:0,63,1889	0/0:35,0:35:99:0,99,3062	1/1:1,18:19:45.15:959,45,0	1/1:1,28:29:84.27:1731,84,0	1/1:0,15:16:39.13:831,39,0	1/1:0,11:11:30.10:639,30,0
chr10	81169575	.	GA	G	18534.49	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=9.389;DP=722;FS=0.000;HRun=2;HaplotypeScore=167.3613;InbreedingCoeff=0.9997;MQ=66.66;MQ0=1;MQRankSum=-0.830;QD=36.27;ReadPosRankSum=2.812;VQSLOD=4.2736;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:40:99:1363,105,0	1/1:0,12:12:36.12:467,36,0	0/0:26,0:24:72.24:0,72,1036	0/0:23,0:23:66.21:0,66,956	1/1:0,22:22:63.20:812,63,0	0/0:22,0:22:66.20:0,66,948	0/0:22,0:22:63.21:0,63,941	1/1:2,27:29:81.22:1009,81,0	0/0:27,0:27:81.27:0,81,1211	1/1:1,29:30:87.27:1116,87,0	1/1:0,20:20:54.18:701,54,0	0/0:27,0:27:81.24:0,81,1172	1/1:0,36:36:99:1363,105,0	1/1:2,18:20:54.18:701,54,0	1/1:1,34:35:99:1324,102,0	1/1:1,26:27:78.25:1013,78,0	1/1:2,25:27:72.23:935,72,0	1/1:0,17:17:45.15:584,45,0	1/1:2,17:19:51.17:662,51,0	1/1:0,25:25:72.23:930,72,0	1/1:0,50:50:99:1714,132,0	0/0:20,0:20:60.20:0,60,899	0/0:22,0:22:66.22:0,66,989	0/0:22,0:22:66.20:0,66,948	1/1:1,27:28:81.26:1052,81,0	1/1:1,29:30:87.26:1113,87,0	1/1:0,36:36:99:1363,105,0	1/1:0,8:8:24.08:312,24,0
chr10	81170013	.	AT	A	8736.54	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=12.952;DP=564;FS=0.000;HRun=7;HaplotypeScore=59.3397;InbreedingCoeff=0.9844;MQ=71.72;MQ0=1;MQRankSum=-0.418;QD=26.00;ReadPosRankSum=0.520;VQSLOD=5.2546;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.28:0,87,1090	1/1:1,6:7:15.03:153,15,0	0/0:20,1:16:29.26:0,29,383	0/0:17,0:15:19.03:0,19,191	1/1:1,34:35:93.20:945,93,0	0/0:29,0:29:75.24:0,75,943	0/0:17,0:17:30.45:0,30,445	1/1:2,30:32:90.20:918,90,0	0/0:14,0:14:42.13:0,42,528	1/1:3,17:20:51.12:520,51,0	1/1:3,24:27:72.16:735,72,0	0/0:12,0:12:36.12:0,36,452	0/0:20,0:20:54.16:0,54,666	0/0:12,0:12:36.12:0,36,453	1/1:1,13:14:39.09:398,39,0	1/1:2,22:24:53.98:551,54,0	1/1:3,14:17:42.09:427,42,0	1/1:2,7:9:21.05:214,21,0	1/1:2,14:16:7.36:390,7,0	1/1:3,30:33:87.19:886,87,0	1/1:2,11:13:30.07:306,30,0	0/0:10,0:10:24.08:0,24,302	0/0:26,0:26:72.20:0,72,879	0/0:20,0:20:48.15:0,48,603	1/1:3,18:21:48.11:490,48,0	1/1:2,24:26:72.16:734,72,0	1/1:2,28:30:75.17:763,75,0	1/1:2,10:12:30.07:306,30,0
chr10	81170278	.	A	AACC	30472.53	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=9.035;DP=600;FS=11.367;HRun=0;HaplotypeScore=149.7808;InbreedingCoeff=0.9976;MQ=73.86;MQ0=1;MQRankSum=-9.135;QD=56.54;ReadPosRankSum=5.858;VQSLOD=5.7093;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:27:51.14:1114,51,0	1/1:1,9:11:27.09:621,27,0	0/0:26,0:26:60.13:0,60,902	0/0:14,0:14:36.11:0,36,580	1/1:2,22:24:60.11:1297,60,0	1/1:5,26:34:75.23:1709,75,0	0/0:21,0:21:57.17:0,57,920	1/1:9,22:33:93.26:1981,93,0	1/1:1,15:16:42.14:964,42,0	1/1:1,26:29:81.28:1804,81,0	1/1:0,17:19:51.18:1168,51,0	1/1:3,17:22:60.18:1353,60,0	1/1:4,9:16:45.15:1010,45,0	1/1:5,14:20:54.18:1178,54,0	1/1:7,13:20:51.17:1120,51,0	1/1:3,18:23:57.20:1287,57,0	1/1:0,22:21:60.21:1381,60,0	1/1:2,7:9:27.09:576,27,0	1/1:3,14:19:51.10:1053,51,0	1/1:3,24:30:72.18:1558,72,0	1/1:1,8:9:21.07:482,21,0	1/1:2,11:13:36.12:827,36,0	1/1:2,22:25:59.97:1378,60,0	1/1:2,12:15:33.07:674,33,0	1/1:1,18:20:54.19:1239,54,0	1/1:5,18:24:66.23:1466,66,0	1/1:3,38:42:99:2338,102,0	1/1:2,15:15:39.13:896,39,0
chr10	81170542	.	T	TCC	4113.69	PASS	AB=0.856;AC=15;AF=0.268;AN=56;BaseQRankSum=5.108;DP=689;FS=5.417;HRun=0;HaplotypeScore=133.3938;InbreedingCoeff=-0.3854;MQ=51.15;MQ0=7;MQRankSum=-8.781;QD=9.54;ReadPosRankSum=-5.102;VQSLOD=2.2646;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:24,8:33:99:162,0,901	0/1:7,4:11:99:206,0,310	0/0:17,0:3:9.03:0,9,135	0/0:7,0:1:3.01:0,3,49	0/1:38,0:38:99:123,0,959	0/0:25,0:25:23.63:0,24,228	0/0:23,0:23:51.10:0,51,1055	0/0:32,0:31:9.55:0,10,1190	0/0:22,0:22:63.22:0,63,1028	0/1:33,0:33:99:223,0,1026	0/1:18,12:30:99:488,0,704	0/0:16,0:16:23.96:0,24,224	0/1:16,8:25:99:462,0,707	0/1:18,5:23:99:308,0,596	0/1:20,0:20:99:113,0,558	0/1:18,0:18:24.39:24,0,594	0/1:27,1:27:53.69:54,0,906	0/0:7,0:7:15.03:0,15,220	0/1:23,2:25:99:114,0,850	0/1:27,12:38:99:500,0,906	0/0:14,0:14:39.11:0,39,587	0/0:17,0:17:51.17:0,51,830	0/0:31,0:30:53.62:0,54,591	0/0:29,0:29:39:0,39,442	0/1:32,1:34:99:327,0,692	0/1:24,7:32:99:388,0,1023	0/1:22,18:40:99:621,0,812	0/0:18,0:17:51.17:0,51,832
chr10	81170551	.	T	TTCTC	2787.52	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-1.986;DP=678;FS=3.932;HRun=0;HaplotypeScore=161.0783;InbreedingCoeff=0.4140;MQ=50.85;MQ0=6;MQRankSum=3.483;QD=12.17;ReadPosRankSum=4.851;VQSLOD=2.9370;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:13.38:0,13,449	0/0:10,0:10:29.45:0,29,219	0/0:13,0:1:2.98:0,3,22	0/0:6,0:1:3:0,3,26	0/0:33,0:33:13.42:0,13,316	1/1:1,27:28:21.07:565,21,0	0/0:20,0:20:43.92:0,44,674	0/0:34,0:33:89.60:0,90,733	0/1:25,0:25:99:173,0,246	0/0:32,0:32:0.82:0,1,439	0/0:33,0:32:63.99:0,64,521	1/1:0,16:17:21.07:564,21,0	0/0:23,0:23:60.39:0,60,446	0/0:23,0:23:61.88:0,62,459	0/1:22,0:22:1.27:1,0,321	0/0:18,0:18:10.85:0,11,278	0/1:23,0:22:16.05:16,0,263	0/0:6,0:6:6.87:0,7,50	0/0:25,0:25:40.35:0,40,432	0/0:38,0:37:24.14:0,24,512	0/0:12,0:12:29.91:0,30,249	0/1:20,0:20:85.13:85,0,238	1/1:1,28:29:46.93:909,47,0	1/1:3,26:30:8.09:627,8,0	0/1:34,0:33:11.83:12,0,311	0/0:28,0:28:80.69:0,81,622	0/0:42,0:42:63.28:0,63,594	0/0:20,0:19:53.77:0,54,440
chr10	81170558	.	T	TTTCC	5796.43	PASS	AB=0.971;AC=27;AF=0.482;AN=56;BaseQRankSum=-7.343;DP=658;FS=15.987;HRun=0;HaplotypeScore=147.2970;InbreedingCoeff=-0.3986;MQ=50.98;MQ0=9;MQRankSum=0.651;QD=10.08;ReadPosRankSum=4.852;VQSLOD=3.2764;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,2:31:43.95:408,0,44	0/1:10,0:10:48.62:87,0,49	0/0:10,0:2:5.79:0,6,36	0/0:4,0:1:2.92:0,3,17	0/1:10,22:34:32.23:316,0,32	1/1:25,0:25:21.04:215,21,0	0/0:22,0:22:41.91:0,42,657	0/1:33,0:32:99:267,0,190	0/0:27,0:27:78.09:0,78,955	1/1:28,0:28:26.16:373,26,0	0/1:32,0:31:99:193,0,122	1/1:18,0:18:0.10:185,0,0	0/1:21,0:21:90.20:151,0,90	0/1:24,0:24:99:221,0,128	0/1:21,1:22:72.48:268,0,72	0/1:20,0:20:67.07:201,0,67	0/1:22,1:22:17.04:315,0,17	0/1:8,0:8:12.03:12,0,35	0/1:25,0:22:99:223,0,125	0/1:37,0:36:3.64:423,0,4	1/1:11,0:11:26.86:212,27,0	0/0:20,0:20:57.01:0,57,755	0/1:25,0:24:21.69:282,0,22	0/1:28,0:28:19.92:213,0,20	0/1:36,0:35:21.73:375,0,22	0/1:28,0:28:99:290,0,124	0/1:42,0:42:99:354,0,167	0/1:14,0:13:11.18:210,0,11
chr10	81170753	.	CCTT	C	17131.70	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=13.715;DP=639;FS=8.859;HRun=0;HaplotypeScore=98.7298;InbreedingCoeff=0.9693;MQ=86.22;MQ0=0;MQRankSum=-5.047;QD=40.40;ReadPosRankSum=3.946;VQSLOD=6.1466;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,38:43:90.31:1470,90,0	1/1:0,5:5:12.04:196,12,0	0/0:28,0:28:20.65:0,21,1273	0/0:19,0:20:57.12:0,57,1068	1/1:2,23:25:54.18:880,54,0	0/0:30,0:30:87.30:0,87,1943	0/0:23,0:23:60.18:0,60,1216	1/1:4,38:42:99:1762,114,0	0/0:23,0:23:63.20:0,63,1347	1/1:1,16:17:48.16:782,48,0	1/1:1,22:23:54.18:882,54,0	0/0:27,0:27:81.28:0,81,1774	1/1:0,17:17:51.17:832,51,0	1/1:1,23:24:57.19:930,57,0	1/1:0,25:25:60.20:980,60,0	1/1:2,16:18:48.16:784,48,0	1/1:1,28:29:75.24:1225,75,0	1/1:1,4:5:6.02:98,6,0	1/1:1,17:18:51.17:824,51,0	1/1:1,24:25:57.19:931,57,0	1/1:2,25:27:66.23:1078,66,0	0/0:17,0:17:45.14:0,45,960	0/0:24,0:24:72.23:0,72,1559	0/0:23,0:23:66.23:0,66,1456	1/1:1,21:22:57.19:931,57,0	1/1:2,23:25:66.23:1078,66,0	1/1:1,28:29:81.28:1322,81,0	1/1:1,4:5:9.03:147,9,0
chr10	81171945	.	CAG	C	297.28	PASS	AB=0.936;AC=11;AF=0.239;AN=46;BaseQRankSum=0.919;DP=573;FS=2.203;HRun=0;HaplotypeScore=98.9880;InbreedingCoeff=0.1634;MQ=48.14;MQ0=56;MQRankSum=-0.684;QD=1.75;ReadPosRankSum=0.806;VQSLOD=2.0616;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:6.45:0,6,54	0/0:13,0:13:11.53:0,12,65	./.	./.	0/0:33,0:32:3.01:0,3,33	0/1:21,2:22:6.49:114,0,6	0/0:14,0:10:4.23:0,4,26	0/1:23,0:17:30.23:62,0,30	1/1:6,9:13:6.49:68,6,0	0/1:23,0:22:7.30:17,0,7	./.	1/1:7,0:7:5.38:41,5,0	0/0:16,0:13:9.73:0,10,43	0/0:12,0:11:1.49:0,1,11	0/0:20,0:19:15.52:0,16,100	0/0:10,0:9:1.82:0,2,5	0/0:25,0:21:0.43:0,0,1	0/0:10,0:9:5.79:0,6,37	0/0:27,0:27:6.33:0,6,88	0/0:32,0:32:9.81:0,10,55	0/0:15,0:9:3.48:0,3,32	1/1:14,12:26:8.05:71,8,0	./.	0/1:15,6:18:11.90:41,0,12	./.	0/0:28,0:26:1.66:0,2,64	0/1:31,0:29:11.23:11,0,11	0/0:13,0:6:2.74:0,3,12
chr10	81171947	.	G	GAC	3611.85	PASS	AB=0.715;AC=29;AF=0.518;AN=56;BaseQRankSum=-4.828;DP=602;FS=1.826;HRun=0;HaplotypeScore=108.4359;InbreedingCoeff=0.6845;MQ=47.07;MQ0=57;MQRankSum=2.361;QD=9.98;ReadPosRankSum=0.504;VQSLOD=3.4406;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:25:19.61:0,20,202	1/1:14,0:14:17.24:292,17,0	0/0:24,0:6:10.08:0,10,63	0/0:29,0:2:3.37:0,3,18	1/1:5,28:32:0.76:44,1,0	0/0:28,0:27:10.61:0,11,138	0/0:15,0:10:8.96:0,9,71	1/1:21,7:22:20.12:368,20,0	0/0:15,0:13:11.60:0,12,85	1/1:7,16:22:16.41:419,16,0	1/1:7,15:22:2.87:16,3,0	0/0:7,0:7:14.92:0,15,114	0/0:17,0:14:24.11:0,24,194	0/0:13,0:12:9.43:0,9,181	1/1:21,0:20:26.89:370,27,0	1/1:3,7:9:3.01:56,3,0	1/1:25,0:21:18.49:242,18,0	1/1:11,0:10:11.98:128,12,0	1/1:11,19:30:2.29:424,2,0	1/1:30,3:33:35.51:372,36,0	0/1:16,0:10:2.24:59,0,2	0/0:25,0:25:26.71:0,27,208	0/0:16,0:16:8.73:0,9,53	0/0:23,0:19:29.81:0,30,239	0/1:7,11:18:0:0,0,0	1/1:9,23:30:54.98:641,55,0	0/1:3,28:29:8.29:29,0,8	1/1:15,0:8:14.98:152,15,0
chr10	81171979	.	G	GAC	614.64	PASS	AB=0.983;AC=17;AF=0.354;AN=48;BaseQRankSum=1.185;DP=464;FS=0.633;HRun=0;HaplotypeScore=97.3724;InbreedingCoeff=-0.3362;MQ=39.88;MQ0=56;MQRankSum=-2.933;QD=2.03;ReadPosRankSum=3.461;VQSLOD=1.7402;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:24:12.05:12,0,89	0/1:13,0:13:17.71:18,0,36	./.	./.	0/0:19,0:17:2.94:0,3,18	0/1:27,0:26:13.47:58,0,13	0/0:19,0:12:10:0,10,65	1/1:32,0:27:11.14:309,11,0	0/1:17,0:15:17.16:33,0,17	0/1:12,0:10:25.33:72,0,25	0/0:13,0:13:0:0,0,0	0/0:8,0:7:2.93:0,3,34	0/0:20,0:14:7.78:0,8,87	0/1:12,0:11:8.51:9,0,70	0/1:19,1:18:10.02:10,0,70	0/1:9,0:7:1.70:2,0,10	0/0:18,0:13:11.39:0,11,71	0/1:12,0:10:4.56:5,0,18	0/1:20,0:20:75.88:76,0,106	0/1:20,1:21:14.57:15,0,15	0/0:16,0:10:6.27:0,6,39	0/1:22,0:21:11.01:32,0,11	./.	0/0:21,0:16:11.50:0,12,112	./.	0/1:24,0:22:83.87:84,0,114	0/1:18,0:16:10.41:10,0,65	0/1:12,3:7:5.19:5,0,13
chr10	81171981	.	GAC	G	1349.56	PASS	AB=0.987;AC=36;AF=0.720;AN=50;BaseQRankSum=-0.794;DP=437;FS=5.883;HRun=0;HaplotypeScore=81.5452;InbreedingCoeff=-0.0639;MQ=39.51;MQ0=56;MQRankSum=5.564;QD=3.52;ReadPosRankSum=-2.274;VQSLOD=1.3422;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:23:5.69:75,6,0	0/1:14,0:13:10.88:104,0,11	./.	./.	0/1:17,0:15:9.04:12,0,9	1/1:28,0:27:11.29:69,11,0	1/1:19,0:12:8.77:54,9,0	0/0:28,0:23:2.95:0,3,176	0/1:16,0:15:10.08:12,0,10	0/1:12,0:10:9.22:107,0,9	0/1:9,0:9:0:0,0,0	1/1:8,0:7:10.04:59,10,0	0/1:19,0:13:5.14:39,0,5	1/1:11,0:10:11.03:61,11,0	1/1:18,2:18:1.18:124,1,0	1/1:9,0:7:5:26,5,0	1/1:17,0:12:10.51:90,11,0	1/1:4,8:10:2.60:10,3,0	0/1:15,0:15:48.30:103,0,48	1/1:19,1:20:8.77:44,9,0	0/1:15,0:9:11:40,0,11	1/1:21,0:20:10.58:65,11,0	./.	1/1:20,0:15:18.20:128,18,0	0/0:12,0:12:0:0,0,0	0/1:21,0:19:31.32:172,0,31	1/1:18,0:16:11.52:79,12,0	0/1:12,1:5:4.51:6,0,5
chr10	81174327	.	C	CTA	2384.97	PASS	AC=38;AF=0.760;AN=50;BaseQRankSum=1.563;DP=251;FS=15.243;HRun=0;HaplotypeScore=50.0893;InbreedingCoeff=0.5988;MQ=76.62;MQ0=1;MQRankSum=-2.070;QD=14.63;ReadPosRankSum=0.910;VQSLOD=1.5161;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.19:0,63,788	1/1:1,0:2:2.98:22,3,0	0/0:8,0:8:12.04:0,12,153	0/0:9,0:9:9.03:0,9,104	1/1:7,0:9:3:25,3,0	1/1:6,15:20:36.12:602,36,0	1/1:1,4:5:12.04:201,12,0	1/1:20,0:36:34.38:157,34,0	1/1:2,13:15:33.11:552,33,0	1/1:4,0:4:0.89:2,1,0	0/0:3,0:5:1.55:0,2,4	1/1:2,10:12:27.09:452,27,0	0/0:14,0:14:36.10:0,36,445	0/0:12,0:12:33.11:0,33,419	./.	./.	1/1:4,0:8:4.78:18,5,0	1/1:2,0:4:1.52:4,2,0	1/1:3,0:5:1.25:3,1,0	./.	1/1:5,0:4:3.01:34,3,0	1/1:2,2:4:6.02:100,6,0	1/1:0,3:3:9.03:151,9,0	1/1:2,3:5:6.02:100,6,0	1/1:3,0:8:5.89:39,6,0	1/1:6,0:6:5.60:36,6,0	1/1:1,0:3:3.01:31,3,0	1/1:1,0:5:2.68:11,3,0
chr10	81174337	.	ATTC	A	231.22	PASS	AB=0.797;AC=6;AF=0.107;AN=56;BaseQRankSum=4.030;DP=248;FS=1.184;HRun=0;HaplotypeScore=60.6202;InbreedingCoeff=0.0423;MQ=76.26;MQ0=1;MQRankSum=-3.377;QD=3.73;ReadPosRankSum=0.482;VQSLOD=1.3471;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.18:0,75,1606	0/0:2,0:2:2.99:0,3,38	0/0:7,0:7:15.04:0,15,309	0/0:10,0:10:12.04:0,12,228	0/0:6,0:6:8.91:0,9,118	0/0:18,0:17:42.14:0,42,689	0/0:5,0:5:15.05:0,15,258	0/1:35,4:38:99:209,0,1759	0/0:14,0:14:39.08:0,39,616	0/1:2,0:3:39.73:40,0,60	0/0:3,0:3:5.93:0,6,87	0/0:12,0:12:30.08:0,30,457	0/0:16,0:16:48.15:0,48,1030	0/0:12,0:12:36.12:0,36,830	0/0:5,0:5:11.82:0,12,90	0/0:1,0:1:2.94:0,3,18	0/0:10,0:12:18.06:0,18,291	0/1:2,1:4:40.89:41,0,80	0/0:4,0:4:6.02:0,6,124	0/0:4,1:5:8.88:0,9,102	0/0:4,0:4:8.96:0,9,147	0/0:4,0:4:12.04:0,12,226	0/0:5,0:5:15.05:0,15,268	0/0:3,0:3:6.02:0,6,93	0/0:7,0:6:17.77:0,18,176	1/1:3,2:5:3.01:46,3,0	0/0:2,1:3:6.02:0,6,102	0/1:8,0:9:12.46:12,0,369
chr10	81174528	.	GTT	G	7180.97	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=15.715;DP=396;FS=18.021;HRun=2;HaplotypeScore=125.4752;InbreedingCoeff=0.9497;MQ=81.32;MQ0=1;MQRankSum=-15.423;QD=43.79;ReadPosRankSum=1.606;VQSLOD=3.5370;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.31:0,90,1789	1/1:0,3:3:9.03:146,9,0	0/0:21,0:21:60.68:0,61,1169	0/0:13,0:13:38.87:0,39,668	1/1:0,12:11:30.10:482,30,0	0/0:30,0:30:87.28:0,87,1719	0/0:18,0:18:54.19:0,54,1097	1/1:2,23:25:75.24:1166,75,0	0/0:18,0:18:54.19:0,54,1088	1/1:0,14:13:39.13:634,39,0	1/1:2,11:10:27.08:404,27,0	0/0:17,0:17:51.18:0,51,1034	0/0:23,0:23:69.22:0,69,1358	0/0:20,0:20:60.21:0,60,1209	1/1:3,10:12:36.08:530,36,0	1/1:0,13:13:39.13:633,39,0	1/1:0,6:6:15.05:243,15,0	1/1:0,1:1:3.01:48,3,0	1/1:0,8:8:24.08:382,24,0	1/1:1,7:8:24.07:350,24,0	1/1:1,8:9:24.08:387,24,0	0/0:14,0:14:42.14:0,42,853	0/0:13,0:13:36.12:0,36,710	0/0:15,0:15:45.15:0,45,897	1/1:1,9:9:24.08:377,24,0	1/1:0,14:14:42.14:680,42,0	1/1:0,13:13:39.13:620,39,0	1/1:0,2:2:6.02:97,6,0
chr10	81174533	.	TA	T	3056.26	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=16.122;DP=385;FS=21.537;HRun=1;HaplotypeScore=129.6775;InbreedingCoeff=0.9464;MQ=81.72;MQ0=1;MQRankSum=-15.372;QD=19.72;ReadPosRankSum=2.327;VQSLOD=2.5817;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.30:0,87,1379	1/1:0,3:3:8.96:69,9,0	0/0:22,0:22:60.68:0,61,960	0/0:11,0:11:30.04:0,30,430	1/1:1,11:11:29.85:224,30,0	0/0:33,0:33:90.28:0,90,1405	0/0:19,0:19:57.18:0,57,887	1/1:1,22:23:67.91:535,68,0	0/0:17,0:17:51.17:0,51,802	1/1:1,13:13:38.93:317,39,0	1/1:1,10:8:23.80:176,24,0	0/0:16,0:16:48.15:0,48,744	0/0:23,0:23:69.22:0,69,1073	0/0:21,0:21:63.20:0,63,980	1/1:1,10:10:29.74:219,30,0	1/1:0,13:13:38.86:305,39,0	1/1:0,6:6:14.91:112,15,0	1/1:0,1:1:3:26,3,0	1/1:1,7:8:16.73:167,17,0	1/1:0,7:7:20.79:151,21,0	1/1:0,8:8:17.91:138,18,0	0/0:14,0:14:39.13:0,39,623	0/0:11,0:11:33.11:0,33,527	0/0:14,0:14:42.14:0,42,669	1/1:0,9:8:20.93:164,21,0	1/1:0,14:14:41.87:330,42,0	1/1:0,13:13:38.79:300,39,0	1/1:0,2:2:5.99:49,6,0
chr10	81174535	.	TTGAACA	T	8657.58	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=16.170;DP=382;FS=25.816;HRun=0;HaplotypeScore=148.8763;InbreedingCoeff=0.8900;MQ=83.04;MQ0=1;MQRankSum=-15.504;QD=53.11;ReadPosRankSum=2.285;VQSLOD=3.1782;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.26:0,87,3179	1/1:0,3:3:9.03:183,9,0	0/0:23,0:23:63.22:0,63,2290	0/1:11,0:11:5.79:6,0,814	1/1:1,11:11:30.10:607,30,0	0/0:34,0:34:99:0,99,3635	0/0:19,0:19:57.20:0,57,2113	1/1:0,22:22:66.23:1340,66,0	0/0:17,0:17:51.14:0,51,1729	1/1:1,13:13:39.13:793,39,0	1/1:0,10:8:24.08:490,24,0	0/0:15,0:15:45.15:0,45,1694	0/0:23,0:23:69.24:0,69,2550	0/0:21,0:21:63.22:0,63,2261	1/1:0,10:10:30.10:608,30,0	1/1:0,13:13:39.13:798,39,0	1/1:0,6:6:15.05:302,15,0	1/1:0,1:1:3.01:62,3,0	1/1:1,7:8:24.01:447,24,0	1/1:0,7:7:21.07:434,21,0	1/1:0,8:8:18.06:366,18,0	0/0:13,0:13:39.13:0,39,1468	0/0:11,0:11:33.11:0,33,1242	0/0:14,0:14:42.13:0,42,1430	1/1:0,9:8:21.07:430,21,0	1/1:0,14:14:42.14:860,42,0	1/1:0,13:13:39.13:808,39,0	1/1:0,2:2:6.02:123,6,0
chr10	81174742	.	G	GA	11867.56	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=0.200;DP=678;FS=3.396;HRun=7;HaplotypeScore=76.8937;InbreedingCoeff=0.9842;MQ=65.90;MQ0=0;MQRankSum=-1.920;QD=30.99;ReadPosRankSum=-1.008;VQSLOD=4.6600;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:76.53:0,77,790	1/1:0,3:3:6.02:72,6,0	0/0:22,0:22:56.99:0,57,529	0/0:19,0:18:29.22:0,29,370	1/1:2,24:26:72.14:837,72,0	0/0:32,0:31:81.12:0,81,782	0/0:23,0:23:54.06:0,54,515	1/1:3,41:44:99:1463,123,0	0/0:20,0:20:54.05:0,54,508	1/1:2,33:36:99:1174,99,0	1/1:3,23:26:63.15:745,63,0	0/0:30,0:30:87.12:0,87,829	0/0:16,0:16:42.02:0,42,397	0/0:22,0:22:54.05:0,54,511	1/1:1,23:24:60.14:705,60,0	1/1:4,24:28:66.20:797,66,0	1/1:0,28:28:78.24:942,78,0	1/1:3,11:14:33.10:399,33,0	1/1:1,15:16:45.13:533,45,0	1/1:3,16:19:48.11:563,48,0	1/1:4,16:20:48.11:564,48,0	0/0:28,0:28:81.13:0,81,782	0/0:30,0:30:84.13:0,84,811	0/0:23,0:23:63.10:0,63,608	1/1:0,19:19:51.16:613,51,0	1/1:3,31:34:67.30:1055,67,0	1/1:3,37:40:99:1189,99,0	1/1:0,6:6:18.06:217,18,0
chr10	81175494	.	TG	T	5562.22	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=13.605;DP=376;FS=9.032;HRun=6;HaplotypeScore=64.4573;InbreedingCoeff=0.9577;MQ=57.94;MQ0=6;MQRankSum=0.476;QD=25.87;ReadPosRankSum=1.085;VQSLOD=4.9177;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.20:0,66,853	1/1:1,4:5:9.02:97,9,0	0/0:6,0:3:9.02:0,9,105	0/0:15,0:8:24.07:0,24,292	1/1:1,6:7:21.02:214,21,0	0/0:8,0:8:21.07:0,21,276	0/0:23,0:22:60.19:0,60,785	1/1:3,24:23:45.11:483,45,0	0/0:11,0:11:33.07:0,33,393	1/1:0,10:11:24.03:258,24,0	1/1:0,4:4:12.03:129,12,0	0/0:13,0:13:36.12:0,36,473	0/0:9,0:9:18.05:0,18,222	0/0:12,0:12:36.08:0,36,417	1/1:2,11:13:30.07:322,30,0	1/1:1,4:5:9.02:97,9,0	1/1:2,27:29:78.20:838,78,0	1/1:1,11:12:30.07:322,30,0	1/1:0,6:6:15.04:161,15,0	1/1:0,10:10:27.07:290,27,0	1/1:2,30:32:81.20:870,81,0	0/0:15,0:15:39.11:0,39,497	0/0:11,0:11:33.10:0,33,419	0/0:15,0:15:36.12:0,36,471	1/1:0,17:17:44.96:483,45,0	1/1:1,13:14:39.10:419,39,0	1/1:2,15:17:45.11:483,45,0	1/1:1,5:6:8.89:96,9,0
chr10	81175976	.	T	TAAAA	10655.86	PASS	AB=0.571;AC=33;AF=0.589;AN=56;BaseQRankSum=3.223;DP=395;FS=0.000;HRun=9;HaplotypeScore=108.3617;InbreedingCoeff=0.8036;MQ=66.96;MQ0=3;MQRankSum=-8.711;QD=41.79;ReadPosRankSum=-4.311;VQSLOD=2.9873;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:53.97:0,54,720	1/1:1,2:3:6.02:144,6,0	0/0:11,0:12:13.50:0,14,152	0/0:26,0:17:22.09:0,22,363	1/1:13,16:29:75.17:1422,75,0	0/0:2,0:18:16.73:0,17,45	0/0:10,0:10:11.98:0,12,175	1/1:16,4:21:36.03:587,36,0	0/0:1,0:9:7.47:0,7,20	1/1:10,6:16:30.05:577,30,0	1/1:13,6:21:59.96:869,60,0	0/0:1,0:10:12.26:0,12,36	0/0:9,0:9:27.08:0,27,374	0/0:17,0:18:48.10:0,48,658	1/1:6,8:14:38.15:769,38,0	1/1:4,2:8:23.96:363,24,0	1/1:8,5:12:31.92:621,32,0	1/1:1,14:19:33.11:692,33,0	1/1:10,4:14:36.05:595,36,0	1/1:15,6:22:51.10:858,51,0	1/1:1,1:2:3.01:40,3,0	0/0:2,0:5:3.70:0,4,10	0/1:3,0:12:8.11:8,0,11	0/0:0,0:2:1.25:0,1,3	1/1:8,6:15:42.05:704,42,0	1/1:9,10:21:54.18:1051,54,0	1/1:7,15:23:69.08:1309,69,0	1/1:1,0:1:3.01:49,3,0
chr10	81176008	.	A	AT	2974.25	PASS	AB=0.963;AC=33;AF=0.589;AN=56;BaseQRankSum=12.588;DP=370;FS=1.382;HRun=2;HaplotypeScore=112.3190;InbreedingCoeff=0.8758;MQ=69.52;MQ0=0;MQRankSum=-11.742;QD=12.77;ReadPosRankSum=-0.765;VQSLOD=2.3068;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.06:0,54,620	1/1:3,0:3:8.74:54,9,0	0/0:19,0:16:26.44:0,26,326	0/1:25,0:18:41.21:41,0,145	1/1:28,0:28:65.33:354,65,0	0/0:19,0:19:48.13:0,48,570	0/0:6,0:6:15.04:0,15,175	1/1:16,2:18:44.54:315,45,0	0/0:16,0:16:39.10:0,39,459	1/1:12,1:13:34.78:256,35,0	1/1:15,0:15:27.78:212,28,0	0/0:7,0:7:20.09:0,20,218	0/0:9,0:9:27.08:0,27,324	0/0:21,0:21:63.20:0,63,779	1/1:12,0:12:32.10:196,32,0	1/1:5,0:5:14.12:82,14,0	1/1:9,0:9:21.68:112,22,0	1/1:10,2:12:26.37:180,26,0	1/1:17,1:18:32.08:277,32,0	1/1:13,1:14:38.52:216,39,0	1/1:1,0:1:2.90:16,3,0	0/0:6,0:6:18.04:0,18,203	0/0:12,0:12:33.10:0,33,397	0/0:3,0:3:9.03:0,9,111	1/1:14,0:14:30.58:163,31,0	1/1:17,0:17:42.61:243,43,0	1/1:22,0:22:61.01:370,61,0	1/1:6,0:6:17.48:109,17,0
chr10	81176017	.	AAG	A	7580.89	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=11.493;DP=385;FS=1.340;HRun=0;HaplotypeScore=107.0103;InbreedingCoeff=0.9034;MQ=73.67;MQ0=0;MQRankSum=-10.115;QD=30.69;ReadPosRankSum=-2.472;VQSLOD=5.9040;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.16:0,48,843	1/1:0,3:3:9.03:130,9,0	0/0:24,0:20:9.23:0,9,537	0/1:16,0:15:7.66:8,0,221	1/1:3,27:30:81.07:1048,81,0	0/0:17,0:17:48.16:0,48,825	0/0:6,0:6:18.04:0,18,288	1/1:5,19:24:66.06:765,66,0	0/0:16,0:16:42.11:0,42,682	1/1:1,11:12:33.09:440,33,0	1/1:7,12:19:53.27:628,53,0	0/0:5,0:5:15.05:0,15,264	0/0:9,0:9:27.08:0,27,448	0/0:22,0:22:66.21:0,66,1125	1/1:1,10:11:30.09:418,30,0	1/1:3,5:8:24.03:293,24,0	1/1:0,10:10:21.07:301,21,0	1/1:4,6:10:23.63:291,24,0	1/1:3,15:18:44.95:514,45,0	1/1:2,15:17:47.95:576,48,0	1/1:4,1:5:14.94:135,15,0	0/0:6,0:6:18.05:0,18,279	0/0:13,0:13:36.12:0,36,624	0/0:3,0:3:9.03:0,9,159	1/1:2,16:18:42.04:528,42,0	1/1:3,16:19:45.12:596,45,0	1/1:3,15:18:45.15:649,45,0	1/1:0,8:8:18.06:261,18,0
chr10	81177114	.	TGTAA	T	12931.31	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=10.918;DP=399;FS=2.758;HRun=0;HaplotypeScore=87.2481;InbreedingCoeff=0.9819;MQ=90.73;MQ0=1;MQRankSum=-6.410;QD=47.02;ReadPosRankSum=5.131;VQSLOD=5.1680;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:63.22:1211,63,0	1/1:1,4:5:12.04:232,12,0	0/0:21,0:20:48.16:0,48,1218	0/0:18,0:18:48.15:0,48,1172	1/1:1,16:17:36.12:698,36,0	0/0:9,0:9:27.09:0,27,708	0/0:10,0:10:27.09:0,27,736	1/1:1,23:24:69.22:1285,69,0	0/0:11,0:11:30.10:0,30,791	1/1:1,12:13:36.10:661,36,0	1/1:1,16:17:36.12:698,36,0	0/0:18,0:18:54.19:0,54,1458	1/1:0,11:11:30.10:581,30,0	1/1:0,12:12:33.11:640,33,0	1/1:0,10:10:27.09:517,27,0	1/1:0,15:15:39.13:750,39,0	1/1:0,22:22:42.14:814,42,0	1/1:1,5:6:15.05:291,15,0	1/1:3,18:21:54.19:1021,54,0	1/1:0,9:9:24.08:465,24,0	1/1:3,19:22:42.14:809,42,0	0/0:11,0:11:33.11:0,33,902	0/0:12,0:12:36.12:0,36,984	0/0:14,0:14:39.12:0,39,948	1/1:0,13:13:33.11:640,33,0	1/1:1,18:19:54.19:1038,54,0	1/1:1,8:9:21.07:407,21,0	1/1:0,3:3:9.03:174,9,0
chr10	81177265	.	T	TG	1774.97	PASS	AC=22;AF=0.688;AN=32;BaseQRankSum=-5.358;DP=140;FS=2.879;HRun=0;HaplotypeScore=35.0625;InbreedingCoeff=0.5726;MQ=53.69;MQ0=3;MQRankSum=2.599;QD=26.10;ReadPosRankSum=0.343;VQSLOD=3.8640;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,2:2:3.01:46,3,0	0/0:19,0:6:0:0,0,0	0/0:33,0:9:20.93:0,21,195	./.	0/0:5,0:5:12.04:0,12,166	./.	1/1:2,20:22:51.69:894,52,0	./.	1/1:0,5:5:11.91:180,12,0	./.	0/0:2,0:2:6.02:0,6,83	./.	./.	1/1:1,5:6:6.02:91,6,0	./.	1/1:1,7:8:6.02:83,6,0	1/1:0,3:2:3.01:47,3,0	1/1:1,4:5:15.04:207,15,0	./.	./.	./.	0/0:2,0:2:3.01:0,3,42	./.	1/1:0,5:5:3.01:45,3,0	1/1:2,4:6:13.08:191,13,0	1/1:0,4:4:6:66,6,0	1/1:0,0:1:3.01:45,3,0
chr10	81177335	.	ATC	A	1347.01	PASS	AC=28;AF=0.824;AN=34;BaseQRankSum=-5.149;DP=185;FS=2.039;HRun=0;HaplotypeScore=59.9250;InbreedingCoeff=0.4978;MQ=120.98;MQ0=4;MQRankSum=-5.543;QD=18.97;ReadPosRankSum=2.658;VQSLOD=3.7606;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:32,0:20:29.99:0,30,232	0/0:68,0:33:23.77:0,24,304	1/1:0,10:10:3.01:45,3,0	1/1:8,0:7:17.31:98,17,0	0/0:2,0:2:6.01:0,6,74	1/1:1,20:21:62.81:712,63,0	1/1:5,0:5:11.50:63,11,0	1/1:0,4:4:12.03:153,12,0	./.	./.	./.	./.	1/1:2,0:2:3:25,3,0	./.	1/1:0,4:4:6.02:91,6,0	1/1:0,5:4:3.01:46,3,0	1/1:3,1:4:9.43:88,9,0	1/1:1,0:1:3:25,3,0	1/1:1,0:1:2.99:24,3,0	./.	1/1:1,0:1:2.84:14,3,0	./.	./.	1/1:0,2:2:3.01:38,3,0	1/1:0,3:3:3.01:45,3,0	./.
chr10	81177337	.	CTA	C	824.41	PASS	AB=1.000;AC=22;AF=0.733;AN=30;BaseQRankSum=-1.469;DP=181;FS=0.000;HRun=0;HaplotypeScore=58.3470;InbreedingCoeff=0.2967;MQ=119.59;MQ0=4;MQRankSum=-4.562;QD=11.78;ReadPosRankSum=3.038;VQSLOD=2.5921;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:29,0:17:16.49:0,16,164	0/0:63,0:32:1.71:0,2,151	0/1:11,0:11:15.42:15,0,19	1/1:0,8:7:18.06:234,18,0	0/0:3,0:3:9.03:0,9,144	1/1:22,0:22:9.17:253,9,0	1/1:0,5:5:12.04:156,12,0	1/1:4,0:4:8.88:62,9,0	./.	1/1:1,0:1:3.01:39,3,0	./.	./.	./.	./.	1/1:4,0:4:5.99:50,6,0	1/1:5,0:4:3:28,3,0	0/1:4,0:4:12.88:18,0,13	./.	./.	./.	1/1:1,0:1:3.01:39,3,0	./.	./.	1/1:2,0:2:2.96:19,3,0	1/1:3,0:3:3:26,3,0	./.
chr10	81177593	.	AT	A	9214.07	PASS	AB=0.583;AC=37;AF=0.661;AN=56;BaseQRankSum=9.502;DP=381;FS=4.285;HRun=5;HaplotypeScore=67.2824;InbreedingCoeff=0.9041;MQ=71.96;MQ0=0;MQRankSum=-3.585;QD=30.71;ReadPosRankSum=1.673;VQSLOD=5.6422;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:19:48.01:513,48,0	1/1:1,5:6:15.04:170,15,0	0/0:12,0:12:34.59:0,35,405	0/0:5,0:5:15.05:0,15,201	1/1:1,9:10:27.08:306,27,0	0/0:17,0:17:48.16:0,48,656	0/0:13,0:13:36.11:0,36,477	1/1:2,34:36:99:1137,102,0	0/0:12,0:12:36.11:0,36,473	1/1:1,21:22:60.17:680,60,0	1/1:2,13:15:39.03:425,39,0	0/0:8,0:8:21.06:0,21,273	1/1:1,14:15:42.12:476,42,0	1/1:2,11:13:36.09:398,36,0	1/1:5,7:12:30.02:307,30,0	1/1:0,10:10:27.08:306,27,0	1/1:2,18:20:54.15:612,54,0	0/1:2,5:7:19.72:121,0,20	1/1:0,22:22:66.19:749,66,0	1/1:0,12:12:36.10:408,36,0	1/1:3,15:18:45.13:510,45,0	0/0:6,0:6:18.06:0,18,246	0/0:4,0:4:12.04:0,12,164	0/0:4,0:4:12.04:0,12,164	1/1:2,11:13:39.03:425,39,0	1/1:2,19:21:63.16:698,63,0	1/1:2,18:20:60.15:668,60,0	1/1:0,9:9:27.08:306,27,0
chr10	81177679	.	AT	A	11125.68	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=11.853;DP=456;FS=6.368;HRun=5;HaplotypeScore=90.1327;InbreedingCoeff=0.9078;MQ=68.05;MQ0=0;MQRankSum=-2.028;QD=30.32;ReadPosRankSum=1.676;VQSLOD=5.2751;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:21:54.14:603,54,0	1/1:1,6:7:18.05:205,18,0	0/0:6,0:6:14.02:0,14,149	0/1:6,0:6:16:16,0,76	1/1:0,25:25:72.09:786,72,0	0/0:13,0:13:39.12:0,39,516	0/0:12,0:12:33.09:0,33,434	1/1:5,30:35:87.23:976,87,0	0/0:18,0:18:54.13:0,54,701	1/1:2,23:25:66.19:752,66,0	1/1:3,22:25:69.14:760,69,0	0/0:7,0:7:18.06:0,18,246	1/1:0,15:15:42.12:477,42,0	1/1:1,16:17:48.14:544,48,0	1/1:2,20:22:63.16:707,63,0	1/1:0,9:9:24.07:272,24,0	1/1:3,28:31:81.23:919,81,0	1/1:0,6:6:18.05:204,18,0	1/1:2,9:11:30.09:340,30,0	1/1:0,10:10:27.08:306,27,0	1/1:0,7:7:21.06:240,21,0	0/0:15,0:15:45.14:0,45,600	0/0:12,0:12:33.11:0,33,451	0/0:6,0:6:18.06:0,18,246	1/1:2,21:23:63.18:714,63,0	1/1:3,26:29:84.23:952,84,0	1/1:2,29:31:90.24:1010,90,0	1/1:0,12:12:30.09:342,30,0
chr10	81177751	.	GTGTCTCTC	G	4368.96	PASS	AB=0.991;AC=28;AF=0.500;AN=56;BaseQRankSum=8.234;DP=481;FS=34.855;HRun=0;HaplotypeScore=177.1758;InbreedingCoeff=0.1197;MQ=49.57;MQ0=10;MQRankSum=-1.727;QD=12.96;ReadPosRankSum=6.180;VQSLOD=1.8686;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:25.69:203,26,0	1/1:7,0:7:14.94:126,15,0	0/0:25,0:13:33.07:0,33,1015	0/0:26,0:12:30.10:0,30,1117	1/1:25,0:26:17.89:275,18,0	0/1:15,0:15:25.30:25,0,585	0/0:11,0:11:33.10:0,33,1310	0/1:28,0:28:74.95:341,0,75	0/0:17,0:17:27.08:0,27,655	1/1:20,0:18:2.79:338,3,0	1/1:16,1:16:15.44:148,15,0	0/0:16,0:16:11.95:0,12,168	0/1:15,0:15:14.81:162,0,15	0/1:13,0:13:31.79:82,0,32	0/1:22,0:22:32.85:256,0,33	1/1:12,0:12:25.19:258,25,0	0/1:18,0:18:72.12:193,0,72	0/1:9,0:9:2.23:110,0,2	1/1:11,4:16:30.56:699,31,0	0/1:18,0:16:20.73:125,0,21	0/1:15,0:14:56.97:90,0,57	0/0:9,0:9:15.05:0,15,389	0/0:25,0:25:18.06:0,18,508	0/0:15,0:13:9.03:0,9,231	0/1:15,0:16:38.88:174,0,39	1/1:18,0:18:2.02:363,2,0	0/1:16,0:16:4.74:251,0,5	0/1:11,0:10:13.91:150,0,14
chr10	81177753	.	GTCTCTC	G	11646.35	PASS	AB=0.887;AC=38;AF=0.679;AN=56;BaseQRankSum=2.011;DP=474;FS=17.611;HRun=0;HaplotypeScore=138.4594;InbreedingCoeff=0.8046;MQ=49.43;MQ0=11;MQRankSum=-1.538;QD=35.29;ReadPosRankSum=2.054;VQSLOD=3.5350;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,2:24:35.40:672,35,0	1/1:7,0:7:15.05:318,15,0	0/0:24,0:12:33.04:0,33,663	0/0:26,0:12:30.10:0,30,716	1/1:19,7:26:42.13:879,42,0	0/1:15,0:16:56.46:56,0,292	0/0:11,0:11:30.10:0,30,915	1/1:4,23:26:66.20:1268,66,0	0/0:15,1:17:21.02:0,21,304	1/1:18,2:18:49.05:966,49,0	1/1:14,3:16:18.06:364,18,0	0/0:16,0:16:8.96:0,9,98	1/1:10,3:14:29.48:606,29,0	1/1:8,3:13:24.06:469,24,0	1/1:16,6:22:33.11:702,33,0	1/1:10,2:12:27.09:525,27,0	1/1:15,2:18:33.06:591,33,0	1/1:8,1:9:15.05:300,15,0	1/1:11,0:11:27.09:330,27,0	1/1:14,5:16:27.07:464,27,0	0/1:12,2:14:45.37:323,0,45	0/0:6,0:9:15:0,15,172	0/0:25,0:26:18.04:0,18,301	0/0:15,0:13:9.01:0,9,109	1/1:14,2:16:27.07:491,27,0	1/1:15,3:18:51.17:1075,51,0	1/1:14,1:15:42.10:788,42,0	1/1:10,1:10:27.05:460,27,0
chr10	81177755	.	CTCTCTCTGTG	C	12016.71	PASS	AB=0.990;AC=36;AF=0.643;AN=56;BaseQRankSum=1.762;DP=468;FS=19.823;HRun=0;HaplotypeScore=158.5826;InbreedingCoeff=0.5238;MQ=49.15;MQ0=11;MQRankSum=-2.678;QD=35.24;ReadPosRankSum=1.481;VQSLOD=3.2859;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:16.95:404,0,17	1/1:3,4:7:15.05:365,15,0	0/0:24,0:12:33.04:0,33,663	0/0:25,0:11:30.10:0,30,716	1/1:23,3:26:42.13:949,42,0	0/1:17,0:17:16.21:16,0,427	0/0:11,0:11:33.11:0,33,1277	1/1:27,0:26:66.20:1269,66,0	0/0:15,0:15:21.03:0,21,482	1/1:14,5:18:51.04:1217,51,0	1/1:12,3:15:18.06:438,18,0	0/0:16,0:16:8.96:0,9,98	0/1:14,0:14:19.58:173,0,20	0/1:12,0:12:9.08:45,0,9	1/1:14,0:20:33.11:778,33,0	1/1:7,4:12:27.09:679,27,0	1/1:15,2:18:33.06:665,33,0	1/1:8,1:9:15.05:283,15,0	1/1:8,0:8:21.41:302,21,0	1/1:15,3:16:27.54:559,28,0	0/1:15,1:15:70.27:368,0,70	0/0:9,0:9:15.01:0,15,232	0/0:27,0:27:18.04:0,18,407	0/1:16,0:14:35.75:36,0,145	1/1:10,5:15:27.07:631,27,0	1/1:16,3:19:57.20:1342,57,0	1/1:12,3:15:42.10:929,42,0	1/1:8,3:10:27.05:567,27,0
chr10	81178092	.	GA	G	9672.21	PASS	AB=0.590;AC=37;AF=0.661;AN=56;BaseQRankSum=13.224;DP=635;FS=17.274;HRun=9;HaplotypeScore=85.2473;InbreedingCoeff=0.9183;MQ=59.83;MQ0=6;MQRankSum=-2.367;QD=21.49;ReadPosRankSum=2.544;VQSLOD=3.9150;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:75.04:686,75,0	1/1:2,9:11:24.01:219,24,0	0/0:15,0:10:21.51:0,22,229	0/0:11,0:8:15.04:0,15,170	1/1:6,26:32:72.03:659,72,0	0/0:32,0:30:87.22:0,87,976	0/0:7,0:10:20.89:0,21,222	1/1:8,25:24:41.99:379,42,0	0/0:20,0:20:54.13:0,54,602	1/1:4,26:31:81.04:741,81,0	1/1:1,18:19:54.03:494,54,0	0/0:22,0:24:63.01:0,63,699	1/1:4,17:21:51.02:467,51,0	1/1:2,25:27:72.04:659,72,0	1/1:3,28:31:84.04:769,84,0	0/1:7,16:23:15.21:385,0,15	1/1:2,22:24:60.03:549,60,0	1/1:2,16:18:48.02:439,48,0	1/1:4,17:19:39.01:356,39,0	1/1:5,30:33:69:631,69,0	1/1:2,11:13:27.01:247,27,0	0/0:13,0:13:36.11:0,36,415	0/0:36,0:37:87.05:0,87,961	0/0:22,0:22:60.17:0,60,683	1/1:1,16:17:42.02:384,42,0	1/1:2,24:26:71.97:645,72,0	1/1:3,26:29:75.04:686,75,0	1/1:2,10:11:30.02:275,30,0
chr10	81179538	.	TTTGGAAAA	T	1564.08	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.140;DP=539;FS=1.857;HRun=0;HaplotypeScore=166.4714;InbreedingCoeff=0.9645;MQ=77.90;MQ0=0;MQRankSum=-6.755;QD=55.86;ReadPosRankSum=3.404;VQSLOD=3.6701;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,6:8:12.04:339,12,0	0/0:9,0:9:27.09:0,27,1197	0/0:15,0:15:42.10:0,42,1406	0/0:13,0:13:20.39:0,20,1092	0/0:42,0:42:99:0,123,5399	0/0:28,0:28:84.29:0,84,3455	0/0:19,0:19:57.20:0,57,2224	0/0:28,0:28:78.26:0,78,3285	0/0:13,0:13:39.13:0,39,1567	0/0:18,0:18:51.17:0,51,2139	0/0:29,0:29:84.29:0,84,3629	0/0:16,0:16:45.15:0,45,1984	1/1:0,5:5:9.02:255,9,0	1/1:1,14:15:39.13:1103,39,0	0/0:25,0:25:69.22:0,69,2867	0/0:13,0:13:39.13:0,39,1711	0/0:15,0:15:45.15:0,45,1823	0/0:15,0:15:45.15:0,45,1876	0/0:15,0:15:45.15:0,45,1979	0/0:38,0:38:99:0,108,4468	0/0:16,0:16:45.14:0,45,1887	0/0:21,0:21:63.22:0,63,2699	0/0:24,0:24:72.25:0,72,3149	0/0:14,0:14:36.12:0,36,1583	0/0:20,0:20:57.20:0,57,2503	0/0:18,0:18:51.17:0,51,2134	0/0:35,0:35:90.31:0,90,3623	0/0:12,0:12:24.08:0,24,979
chr10	81181276	.	T	TA	10706.76	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-16.427;DP=594;FS=0.000;HRun=7;HaplotypeScore=56.8268;InbreedingCoeff=0.9988;MQ=85.10;MQ0=0;MQRankSum=-1.970;QD=30.33;ReadPosRankSum=2.573;VQSLOD=5.0715;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.04:0,72,677	1/1:0,11:11:23.68:290,24,0	0/0:17,0:17:38.99:0,39,359	0/0:20,0:20:56.79:0,57,524	1/1:5,25:29:78.13:907,78,0	0/0:20,0:20:51.08:0,51,492	0/0:14,0:14:39.05:0,39,370	1/1:3,27:30:81.15:923,81,0	0/0:16,0:16:42.05:0,42,400	1/1:4,37:41:99:1340,111,0	1/1:3,27:30:78.24:942,78,0	0/0:19,0:19:54.07:0,54,516	0/0:32,0:32:90.13:0,90,863	0/0:15,0:15:42.07:0,42,405	1/1:4,13:17:39.12:471,39,0	1/1:1,9:10:24.07:290,24,0	1/1:1,20:21:54.17:652,54,0	1/1:0,8:8:21.06:254,21,0	1/1:5,16:21:47.45:578,47,0	1/1:0,25:25:69.04:811,69,0	1/1:2,15:17:36.11:435,36,0	0/0:19,0:19:57.09:0,57,550	0/0:25,0:25:69.11:0,69,666	0/0:18,0:18:48.07:0,48,463	1/1:4,14:18:36.11:435,36,0	1/1:3,27:30:81.23:965,81,0	1/1:2,24:26:69.21:834,69,0	1/1:1,17:18:48.15:580,48,0
chr10	81182524	.	G	GA	1832.54	PASS	AB=0.740;AC=18;AF=0.321;AN=56;BaseQRankSum=-6.234;DP=539;FS=0.000;HRun=12;HaplotypeScore=88.0409;InbreedingCoeff=0.7677;MQ=67.63;MQ0=0;MQRankSum=-1.144;QD=9.30;ReadPosRankSum=0.761;VQSLOD=2.9382;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:25:25.47:127,25,0	0/0:11,0:12:31.77:0,32,219	0/0:11,0:11:7.60:0,8,58	0/0:7,0:7:2.82:0,3,22	0/0:24,0:26:58.25:0,58,384	0/1:4,11:16:7.92:241,0,8	0/0:22,0:22:59.60:0,60,435	0/0:35,1:37:44.38:0,44,478	1/1:2,16:19:10.98:255,11,0	0/0:26,0:26:53.61:0,54,391	0/0:14,0:14:32.86:0,33,240	1/1:3,13:16:14.15:299,14,0	1/1:7,0:17:5.55:29,6,0	1/1:17,0:17:8.19:45,8,0	0/0:22,1:23:20.74:0,21,317	0/0:14,0:17:35.85:0,36,232	0/0:14,0:17:30.85:0,31,209	0/0:15,0:16:25.62:0,26,176	0/0:21,0:21:44.64:0,45,327	0/0:16,0:17:28.81:0,29,202	0/0:13,0:13:27.93:0,28,216	1/1:12,22:34:17.35:452,17,0	1/1:3,18:22:40.08:358,40,0	1/1:1,10:11:21.03:204,21,0	0/0:20,0:20:46.52:0,47,333	0/1:18,2:20:19.60:20,0,202	0/0:25,0:25:50.57:0,51,363	0/0:17,0:18:23.13:0,23,250
chr10	81182869	.	CAGAGAGAGAGATGAGAGAGAG	C	2979.89	PASS	AB=0.813;AC=28;AF=0.519;AN=54;BaseQRankSum=0.989;DP=406;FS=2.594;HRun=0;HaplotypeScore=177.7957;InbreedingCoeff=0.8010;MQ=65.82;MQ0=14;MQRankSum=-4.853;QD=17.84;ReadPosRankSum=2.276;VQSLOD=2.8637;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:39.09:0,39,1592	1/1:4,0:4:9:260,9,0	0/0:55,0:26:41.17:0,41,672	0/0:63,0:23:26.59:0,27,422	0/0:6,5:11:0.47:0,0,1	0/0:10,0:10:24.04:0,24,602	0/0:9,0:8:18.06:0,18,449	1/1:15,0:11:15.05:206,15,0	0/1:14,0:14:1.16:1,0,604	1/1:12,0:12:15.79:482,16,0	0/1:4,6:9:0:0,0,0	0/0:13,0:13:27.09:0,27,613	0/0:9,0:9:12.04:0,12,326	0/0:10,0:10:15.05:0,15,574	1/1:3,13:16:6.02:213,6,0	1/1:12,0:12:14.92:326,15,0	1/1:9,0:6:12.01:145,12,0	1/1:8,0:4:9.03:187,9,0	1/1:7,0:4:6.02:83,6,0	1/1:4,5:9:5.99:192,6,0	1/1:7,0:4:6.02:83,6,0	0/0:11,0:11:24.97:0,25,553	0/0:11,0:11:12.04:0,12,313	0/0:11,0:10:21.07:0,21,375	1/1:11,0:11:15.05:208,15,0	1/1:19,0:19:41.78:554,42,0	1/1:14,0:14:11.87:238,12,0	./.
chr10	81182880	.	AT	A	1821.61	PASS	AB=0.759;AC=27;AF=0.500;AN=54;BaseQRankSum=-0.348;DP=338;FS=6.349;HRun=1;HaplotypeScore=66.5217;InbreedingCoeff=0.6726;MQ=59.12;MQ0=17;MQRankSum=-5.398;QD=14.01;ReadPosRankSum=2.030;VQSLOD=2.8982;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:34.54:0,35,520	1/1:2,2:4:8.90:61,9,0	0/0:47,0:18:28.33:0,28,484	0/0:58,0:18:27.24:0,27,286	0/1:5,2:7:0:0,0,0	0/0:8,0:8:24.04:0,24,351	0/0:9,2:10:20.28:0,20,288	1/1:0,10:6:15.05:206,15,0	0/0:14,0:14:39.07:0,39,519	1/1:2,8:9:18.63:286,19,0	0/0:6,0:6:0:0,0,0	0/0:11,0:11:27.09:0,27,426	0/0:7,0:6:12.01:0,12,159	0/1:6,0:6:6.85:7,0,124	1/1:13,1:14:2.65:14,3,0	1/1:1,9:10:5.91:174,6,0	1/1:0,9:6:12.04:165,12,0	1/1:0,7:3:9:104,9,0	1/1:0,5:2:6.02:83,6,0	1/1:5,1:6:5.85:56,6,0	1/1:1,5:2:6.02:83,6,0	0/0:9,0:9:25.33:0,25,382	0/0:5,0:5:12.04:0,12,190	0/0:10,0:9:20.69:0,21,326	1/1:0,10:10:2.72:153,3,0	1/1:1,13:14:41.93:548,42,0	0/1:0,12:12:11.45:72,0,11	./.
chr10	81182922	.	GAGA	G	118.91	PASS	AB=0.867;AC=11;AF=0.212;AN=52;BaseQRankSum=5.111;DP=223;FS=0.000;HRun=0;HaplotypeScore=62.2558;InbreedingCoeff=0.0292;MQ=45.40;MQ0=21;MQRankSum=-0.471;QD=2.09;ReadPosRankSum=1.465;VQSLOD=1.1260;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:15.01:0,15,323	0/1:5,2:7:37.60:38,0,97	0/0:43,0:3:8.88:0,9,74	0/0:43,0:9:6.33:0,6,78	0/0:8,2:10:3.06:0,3,39	0/0:2,0:1:3.01:0,3,38	0/0:8,0:6:8.80:0,9,57	0/0:3,0:2:2.90:0,3,19	1/1:4,0:4:8.96:89,9,0	0/1:11,2:13:42.87:43,0,177	0/0:7,0:7:0.35:0,0,0	0/1:2,0:2:11.88:12,0,27	0/0:5,0:4:3.01:0,3,58	0/0:6,0:6:12:0,12,159	0/1:11,1:10:5.32:5,0,7	0/1:1,1:2:14.20:14,0,21	0/0:4,0:1:2.84:0,3,14	0/1:4,1:2:22.71:23,0,24	0/0:4,0:2:5.97:0,6,56	1/1:5,0:5:2.37:14,2,0	0/0:3,0:1:0.47:0,0,1	0/0:5,0:5:0.47:0,0,1	./.	0/0:3,0:1:3:0,3,29	0/0:0,1:1:0:0,0,0	0/1:7,0:6:2.91:3,0,111	0/0:4,1:5:2.52:0,3,53	./.
chr10	81182927	.	A	AGAGG	208.43	PASS	AB=1.000;AC=14;AF=0.269;AN=52;BaseQRankSum=0.675;DP=215;FS=2.426;HRun=0;HaplotypeScore=74.6122;InbreedingCoeff=0.1970;MQ=45.01;MQ0=20;MQRankSum=-0.396;QD=4.85;ReadPosRankSum=-0.768;VQSLOD=1.1526;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:8:6.05:6,0,47	0/0:8,0:8:15.97:0,16,86	0/0:43,0:3:1.21:0,1,30	0/0:43,0:9:7.21:0,7,56	0/0:10,0:10:2.30:0,2,9	0/0:3,0:2:2.94:0,3,18	0/0:7,0:5:5.80:0,6,82	0/0:5,0:3:1.66:0,2,11	0/0:3,0:4:3.21:0,3,34	0/0:14,0:14:11.02:0,11,143	0/0:4,0:4:0.39:0,0,3	0/0:2,0:2:3.84:0,4,20	1/1:1,4:4:3.01:83,3,0	1/1:3,1:5:8.73:130,9,0	0/1:7,0:5:8.12:8,0,32	0/1:2,0:2:5.14:44,0,5	0/0:4,0:1:2.88:0,3,15	0/0:5,0:2:5.42:0,5,25	0/0:3,0:2:5.92:0,6,40	0/0:3,0:3:2.39:0,2,19	1/1:3,0:1:0.47:1,0,0	1/1:6,0:6:2.04:7,2,0	./.	0/0:2,0:1:0.47:0,0,1	1/1:2,0:2:3.44:21,3,0	0/0:9,0:8:17.83:0,18,124	0/1:5,0:5:26.44:33,0,26	./.
chr10	81182929	.	GGAGAAGT	G	545	PASS	AB=0.888;AC=27;AF=0.519;AN=52;BaseQRankSum=-0.174;DP=220;FS=1.708;HRun=0;HaplotypeScore=68.0675;InbreedingCoeff=0.0066;MQ=44.71;MQ0=20;MQRankSum=0.200;QD=3.84;ReadPosRankSum=-1.872;VQSLOD=1.4642;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:12.97:0,13,146	0/1:6,2:8:0.57:99,0,1	0/0:43,0:3:9.02:0,9,102	0/1:43,0:9:9.23:9,0,122	0/1:8,2:10:0.92:28,0,1	1/1:3,0:2:5.67:28,6,0	0/0:6,0:5:8.39:0,8,146	1/1:5,0:3:2.68:7,3,0	1/1:2,1:3:8.99:107,9,0	0/1:12,2:14:85.32:85,0,111	0/1:4,0:4:7.35:7,0,9	1/1:1,1:2:1.15:11,1,0	1/1:5,0:4:2.04:6,2,0	0/1:5,0:5:23.33:23,0,69	0/1:6,1:5:8.19:43,0,8	0/1:1,1:2:27.34:37,0,27	0/0:4,0:1:2.84:0,3,14	1/1:4,1:2:5.98:54,6,0	0/1:4,0:3:1.07:1,0,27	1/1:3,0:3:2.99:46,3,0	0/0:4,0:1:0.47:0,0,1	0/0:5,1:6:0.03:0,0,0	./.	1/1:5,0:4:0.47:1,0,0	0/0:1,1:2:2.29:0,2,6	0/1:9,0:8:59.78:78,0,60	0/1:3,2:5:8.63:9,0,24	./.
chr10	81184810	.	TTA	T	421.38	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=5.117;DP=278;FS=0.000;HRun=0;HaplotypeScore=39.6029;InbreedingCoeff=0.7302;MQ=62.23;MQ0=1;MQRankSum=-2.580;QD=22.18;ReadPosRankSum=-0.320;VQSLOD=3.1331;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:27.09:351,27,0	0/0:7,0:7:18.06:0,18,304	0/0:4,0:4:6:0,6,53	0/0:6,0:5:3.13:0,3,19	0/0:10,0:10:27.01:0,27,383	0/0:9,0:7:12.01:0,12,117	0/0:5,0:5:12.04:0,12,203	0/0:38,0:38:90.15:0,90,1339	0/0:4,0:4:8.95:0,9,79	0/0:17,0:17:42.08:0,42,653	0/0:12,0:12:27.09:0,27,455	0/0:4,0:4:6:0,6,53	1/1:1,1:2:2.98:21,3,0	1/1:3,5:7:15.01:175,15,0	0/0:9,0:9:27.02:0,27,408	0/0:15,0:15:41.94:0,42,579	0/0:14,0:14:33.03:0,33,483	0/0:10,0:10:30.10:0,30,506	0/0:14,0:14:39.07:0,39,601	0/0:8,0:8:15.01:0,15,223	0/0:8,0:8:12.04:0,12,187	./.	./.	0/0:2,0:2:0:0,0,0	0/0:11,0:11:27.04:0,27,401	0/0:12,0:12:36.11:0,36,585	0/0:23,0:22:57.11:0,57,891	0/0:13,0:13:39.08:0,39,601
chr10	81184821	.	T	TA	55.61	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=4.516;DP=252;FS=5.911;HRun=1;HaplotypeScore=36.1889;InbreedingCoeff=0.7428;MQ=62.89;MQ0=1;MQRankSum=-3.070;QD=3.71;ReadPosRankSum=0.255;VQSLOD=0.0489;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:29.33:0,29,189	0/0:8,0:8:21.07:0,21,287	0/0:3,0:3:5.73:0,6,36	0/0:6,0:5:5.82:0,6,42	0/0:10,0:10:24.02:0,24,294	1/1:4,5:7:11.85:79,12,0	0/0:4,0:4:12.04:0,12,168	0/0:37,0:37:99:0,105,1299	1/1:2,1:3:8.87:57,9,0	0/0:14,0:14:42.09:0,42,548	0/0:9,0:9:27.09:0,27,375	1/1:1,2:3:5.93:40,6,0	0/0:1,0:1:2.97:0,3,20	0/0:7,0:6:17.68:0,18,126	0/0:9,0:9:26.88:0,27,313	0/0:14,0:14:41.96:0,42,466	0/0:12,0:12:33.01:0,33,411	0/0:11,0:11:30.10:0,30,416	0/0:14,0:14:42.11:0,42,556	0/0:4,0:4:12.04:0,12,167	0/0:5,0:5:15.03:0,15,191	./.	./.	0/0:0,1:1:0:0,0,0	0/0:11,0:11:27:0,27,314	0/0:12,0:12:36.09:0,36,470	0/0:20,0:19:54.14:0,54,716	0/0:13,0:13:39.10:0,39,509
chr10	81184822	.	T	TATA	169.69	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=4.007;DP=244;FS=10.633;HRun=0;HaplotypeScore=44.3170;InbreedingCoeff=0.7056;MQ=63.45;MQ0=1;MQRankSum=-2.981;QD=11.31;ReadPosRankSum=1.080;VQSLOD=1.1080;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:30.10:0,30,444	0/0:8,0:8:21.07:0,21,381	0/0:3,0:3:6.01:0,6,55	0/0:7,0:5:1.87:0,2,5	0/0:8,0:8:24.07:0,24,401	1/1:3,5:6:7.25:133,7,0	0/0:4,0:4:12.04:0,12,224	0/0:33,0:33:93.31:0,93,1676	1/1:2,1:3:6.41:63,6,0	0/0:14,0:14:42.09:0,42,717	0/0:9,0:9:27.09:0,27,502	1/1:2,2:4:6.02:90,6,0	0/0:1,0:1:2.98:0,3,21	0/0:7,0:6:15.05:0,15,225	0/0:9,0:9:27.04:0,27,447	0/0:14,0:14:42.04:0,42,643	0/0:11,0:11:30.10:0,30,530	0/0:11,0:11:30.10:0,30,557	0/0:14,0:14:42.10:0,42,739	0/0:4,0:4:12.04:0,12,223	0/0:5,0:5:15.04:0,15,230	./.	./.	0/0:0,0:1:0:0,0,0	0/0:11,0:11:27.06:0,27,440	0/0:12,0:12:36.12:0,36,626	0/0:19,0:18:57.17:0,57,984	0/0:13,0:13:39.09:0,39,660
chr10	81184844	.	AAT	A	409.32	PASS	AC=6;AF=0.120;AN=50;BaseQRankSum=5.801;DP=213;FS=21.249;HRun=0;HaplotypeScore=42.3641;InbreedingCoeff=0.6576;MQ=69.25;MQ0=0;MQRankSum=-5.541;QD=22.74;ReadPosRankSum=-1.822;VQSLOD=1.2351;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:7:9:0,9,80	0/0:8,0:8:18.06:0,18,295	0/0:4,0:4:8.96:0,9,101	0/0:7,0:5:2.88:0,3,15	0/0:8,0:8:18.06:0,18,308	1/1:3,10:11:30.05:374,30,0	0/0:1,0:1:3.01:0,3,51	0/0:40,0:40:99:0,105,1703	1/1:0,2:2:6.02:79,6,0	0/0:11,0:11:30.10:0,30,508	0/0:9,0:9:24.08:0,24,395	1/1:1,2:3:6.02:79,6,0	0/0:1,0:1:3:0,3,25	0/0:0,0:3:9:0,9,80	0/0:5,0:5:15.05:0,15,224	0/0:10,0:10:24.08:0,24,411	0/0:7,0:7:15.05:0,15,257	0/0:14,0:14:36.12:0,36,612	0/0:16,0:16:39.13:0,39,645	0/0:4,0:4:9.03:0,9,143	0/0:4,0:4:12.03:0,12,179	./.	./.	./.	0/0:6,0:6:9.03:0,9,154	0/0:9,0:9:21.07:0,21,355	0/0:14,0:14:33.10:0,33,523	0/0:6,0:6:15.05:0,15,249
chr10	81184898	.	ATATG	A	6119.95	PASS	AC=42;AF=0.778;AN=54;BaseQRankSum=4.470;DP=223;FS=12.292;HRun=0;HaplotypeScore=47.7248;InbreedingCoeff=0.7228;MQ=61.36;MQ0=0;MQRankSum=-2.627;QD=33.63;ReadPosRankSum=1.759;VQSLOD=3.3829;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.15:0,48,1195	1/1:0,9:9:18.06:340,18,0	0/0:5,0:4:9.01:0,9,91	0/0:7,0:4:5.23:0,5,88	1/1:0,8:8:9.03:170,9,0	1/1:14,0:14:30.03:280,30,0	0/0:4,0:4:12.04:0,12,277	1/1:3,36:39:99:1704,104,0	1/1:7,0:7:12.01:112,12,0	1/1:0,8:8:24.06:385,24,0	1/1:0,4:4:9:134,9,0	1/1:6,0:6:9.01:84,9,0	0/0:3,0:3:9.03:0,9,233	0/0:6,0:6:12.04:0,12,314	1/1:0,3:3:6.02:114,6,0	1/1:1,8:9:24.08:448,24,0	1/1:0,16:16:30.10:562,30,0	1/1:0,6:6:12.04:207,12,0	1/1:1,8:9:24.06:402,24,0	1/1:0,3:3:3.01:57,3,0	1/1:0,4:4:6.02:114,6,0	./.	1/1:2,0:2:2.74:12,3,0	1/1:2,0:2:3:26,3,0	1/1:0,11:11:15.05:285,15,0	1/1:0,7:7:18.05:310,18,0	1/1:1,11:12:17.85:340,18,0	1/1:3,0:3:3.01:35,3,0
chr10	81184901	.	TGTATATA	T	1430.09	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=-0.213;DP=219;FS=0.946;HRun=0;HaplotypeScore=73.8682;InbreedingCoeff=0.6114;MQ=61.98;MQ0=1;MQRankSum=-6.562;QD=34.05;ReadPosRankSum=-0.098;VQSLOD=3.0198;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.17:0,51,1820	0/0:9,0:9:17.04:0,17,84	0/0:4,0:5:12.04:0,12,217	0/0:7,0:4:9.03:0,9,230	0/0:8,0:8:8.52:0,9,42	1/1:1,13:13:30.10:838,30,0	0/0:4,0:4:12.04:0,12,383	0/0:36,0:36:80.63:0,81,482	1/1:0,8:8:12.04:335,12,0	0/0:8,0:8:20.32:0,20,101	0/0:4,0:4:8.05:0,8,36	1/1:0,6:6:9.03:251,9,0	0/0:3,0:3:9.03:0,9,357	0/0:5,0:5:12.04:0,12,480	0/0:3,0:3:5.68:0,6,28	0/1:9,0:9:6.56:7,0,75	0/0:16,0:16:28.31:0,28,138	0/0:6,0:6:6.07:0,6,38	0/0:8,0:8:22.22:0,22,123	0/0:3,0:3:2.84:0,3,14	0/0:4,0:4:4.81:0,5,26	./.	1/1:0,2:2:3.01:67,3,0	1/1:0,3:3:3.01:82,3,0	0/0:11,0:11:13.95:0,14,70	0/0:7,0:7:15.76:0,16,75	0/0:11,0:11:16.68:0,17,80	0/0:2,0:2:5.97:0,6,49
chr10	81185556	.	TA	T	2953.84	PASS	AB=0.806;AC=34;AF=0.773;AN=44;BaseQRankSum=2.441;DP=459;FS=4.306;HRun=2;HaplotypeScore=29.9329;InbreedingCoeff=0.5439;MQ=15.67;MQ0=287;MQRankSum=-1.117;QD=11.23;ReadPosRankSum=-1.250;VQSLOD=1.3456;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:7:18.02:0,18,244	1/1:1,9:6:9.03:116,9,0	./.	./.	1/1:15,13:13:24.08:310,24,0	1/1:2,6:5:12.04:152,12,0	0/0:27,0:6:12.04:0,12,179	./.	1/1:2,5:4:6.02:78,6,0	1/1:10,4:5:9.03:114,9,0	1/1:11,15:13:39.13:496,39,0	1/1:5,3:3:6.02:78,6,0	0/0:15,0:6:18.06:0,18,269	0/0:21,0:3:9.03:0,9,125	1/1:4,7:5:9.03:117,9,0	1/1:3,2:1:3.01:39,3,0	1/1:31,1:1:3.01:39,3,0	./.	1/1:12,5:4:12.04:156,12,0	1/1:10,12:13:33.11:427,33,0	./.	1/1:7,8:7:18.06:233,18,0	0/1:9,5:6:16.74:140,0,17	./.	1/1:5,7:7:21.07:269,21,0	1/1:6,7:5:15.05:194,15,0	1/1:11,3:5:9.03:117,9,0	0/1:6,1:2:32.83:33,0,39
chr10	81186734	.	GA	G	7823.26	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=0.773;DP=412;FS=14.765;HRun=3;HaplotypeScore=44.6969;InbreedingCoeff=0.9622;MQ=53.79;MQ0=9;MQRankSum=-1.339;QD=31.67;ReadPosRankSum=0.596;VQSLOD=3.1515;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:51.17:0,51,733	1/1:0,6:6:18.06:223,18,0	0/0:20,1:8:17.26:0,17,247	0/0:15,0:1:3.01:0,3,43	1/1:1,26:26:57.14:689,57,0	0/0:11,0:11:30.10:0,30,432	0/0:13,0:13:36.12:0,36,518	1/1:0,19:16:48.12:569,48,0	0/0:7,0:7:21.07:0,21,302	1/1:2,18:18:51.15:619,51,0	1/1:2,8:10:24.07:297,24,0	0/0:9,0:9:12.04:0,12,173	0/0:12,0:12:21.07:0,21,302	0/0:15,0:15:36.12:0,36,518	1/1:0,19:19:57.18:705,57,0	1/1:0,15:15:36.11:446,36,0	1/1:0,25:25:72.23:892,72,0	1/1:0,6:6:15.05:186,15,0	1/1:6,7:13:36.02:398,36,0	1/1:2,15:17:42.12:508,42,0	1/1:1,18:19:48.15:595,48,0	0/0:17,0:17:42.09:0,42,579	0/0:11,0:11:24.08:0,24,344	0/0:12,0:12:30.10:0,30,430	1/1:1,8:9:24.08:297,24,0	1/1:2,17:19:57.18:706,57,0	1/1:1,15:16:42.12:507,42,0	1/1:1,6:7:15.05:186,15,0
chr10	81186795	.	GAA	G	4161.28	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-5.598;DP=478;FS=0.998;HRun=15;HaplotypeScore=77.8259;InbreedingCoeff=0.9262;MQ=55.17;MQ0=7;MQRankSum=0.684;QD=13.78;ReadPosRankSum=6.199;VQSLOD=2.7816;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:22:24.58:0,25,249	1/1:3,6:11:20.40:156,20,0	0/0:14,0:7:16.10:0,16,110	0/0:14,0:8:15.48:0,15,97	1/1:10,12:23:35.44:346,35,0	0/0:15,0:16:21.01:0,21,216	0/0:7,0:10:26.04:0,26,274	1/1:13,11:23:3.58:204,4,0	0/0:6,0:12:15.04:0,15,167	1/1:5,13:22:49.90:390,50,0	1/1:4,11:18:38.14:300,38,0	0/0:3,0:12:5.98:0,6,56	0/0:2,0:10:12:0,12,110	0/0:7,0:14:32.88:0,33,325	1/1:17,9:29:25.90:286,26,0	1/1:5,7:15:29.12:220,29,0	1/1:9,9:19:17.67:199,18,0	1/1:4,7:11:11.83:150,12,0	1/1:4,10:15:29.28:271,29,0	1/1:5,22:27:47.09:482,47,0	1/1:4,2:7:13.81:94,14,0	0/0:9,0:14:23.75:0,24,192	0/0:8,0:18:29.89:0,30,256	0/0:0,0:14:6.01:0,6,56	1/1:1,12:16:32.21:247,32,0	1/1:5,17:26:37.94:401,38,0	1/1:8,10:18:29.76:264,30,0	1/1:5,5:11:20.39:152,20,0
chr10	81188041	.	TA	T	268.74	PASS	AB=0.889;AC=7;AF=0.125;AN=56;BaseQRankSum=1.882;DP=272;FS=1.488;HRun=7;HaplotypeScore=30.3659;InbreedingCoeff=0.7264;MQ=76.71;MQ0=0;MQRankSum=-1.373;QD=12.22;ReadPosRankSum=0.827;VQSLOD=1.2161;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:6:15.03:153,15,0	0/0:8,0:8:24.08:0,24,302	0/0:6,0:6:15.04:0,15,178	0/0:7,0:7:9.03:0,9,113	0/0:16,0:16:45.14:0,45,566	0/1:7,1:8:6.55:7,0,226	0/0:4,0:4:12.04:0,12,151	0/0:23,0:23:57.14:0,57,699	0/0:12,0:12:33.11:0,33,415	0/0:15,0:15:36.12:0,36,453	0/0:19,0:19:45.14:0,45,566	0/0:5,0:5:6.02:0,6,75	1/1:0,5:5:15.03:153,15,0	1/1:0,3:3:9.02:92,9,0	0/0:9,0:9:21.07:0,21,264	0/0:10,0:10:27.09:0,27,340	0/0:4,0:4:11.95:0,12,130	0/0:8,0:8:24.02:0,24,283	0/0:17,0:17:45.13:0,45,546	0/0:15,0:15:42.13:0,42,517	0/0:4,0:4:12.04:0,12,150	0/0:7,0:7:21.06:0,21,252	0/0:14,0:14:39.12:0,39,491	0/0:2,0:2:6.02:0,6,75	0/0:9,0:9:21.06:0,21,253	0/0:12,0:12:36.10:0,36,440	0/0:8,0:8:18.05:0,18,219	0/0:16,0:16:48.13:0,48,579
chr10	81188121	.	A	ATATG	1442.95	PASS	AB=1.000;AC=29;AF=0.580;AN=50;BaseQRankSum=0.991;DP=138;FS=1.966;HRun=0;HaplotypeScore=44.1519;InbreedingCoeff=0.2424;MQ=64.73;MQ0=0;MQRankSum=-2.697;QD=13.24;ReadPosRankSum=2.953;VQSLOD=2.7353;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:2.99:0,3,24	./.	0/0:7,0:4:2.14:0,2,42	0/1:4,0:3:0:0,0,0	./.	1/1:4,0:4:8.98:72,9,0	0/0:2,0:2:6.02:0,6,105	0/1:25,0:25:99:285,0,131	1/1:4,0:4:12.01:144,12,0	0/1:9,0:9:33.93:177,0,34	1/1:2,0:2:3.01:51,3,0	1/1:1,4:5:3.01:80,3,0	0/0:4,0:4:9.03:0,9,138	0/0:4,0:4:12.02:0,12,138	1/1:2,0:2:2.98:52,3,0	0/0:3,0:3:5.99:0,6,50	1/1:10,0:10:7.57:75,8,0	1/1:7,0:7:11.94:148,12,0	0/0:2,0:2:2.99:0,3,24	0/1:5,0:5:40.89:44,0,41	0/1:1,0:1:0:0,0,0	1/1:1,0:1:2.99:24,3,0	1/1:6,0:6:14.98:145,15,0	./.	1/1:3,0:3:6.02:103,6,0	1/1:6,0:6:9.45:74,9,0	0/1:5,0:5:10.97:69,0,11	0/1:10,0:10:30.07:52,0,30
chr10	81188135	.	G	GTATATA	1816.91	PASS	AB=1.000;AC=30;AF=0.833;AN=36;BaseQRankSum=-2.707;DP=120;FS=8.719;HRun=0;HaplotypeScore=42.3424;InbreedingCoeff=0.3762;MQ=65.91;MQ0=0;MQRankSum=-0.194;QD=19.54;ReadPosRankSum=-1.852;VQSLOD=0.8166;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,0:2:3.01:50,3,0	./.	./.	./.	./.	0/0:3,0:3:6.01:0,6,73	1/1:22,0:22:28.06:246,28,0	0/1:2,0:2:0:0,0,0	1/1:6,0:6:7.27:80,7,0	1/1:1,1:2:6.01:119,6,0	1/1:4,0:4:3.01:37,3,0	0/0:5,0:5:9.02:0,9,99	0/1:5,0:5:9.42:9,0,116	1/1:3,1:4:11.87:210,12,0	./.	1/1:11,0:12:15.05:267,15,0	1/1:5,3:8:14.79:293,15,0	1/1:2,0:2:1.82:5,2,0	1/1:1,1:2:3.01:96,3,0	./.	./.	./.	./.	1/1:2,1:3:3.01:96,3,0	1/1:7,0:7:5.97:74,6,0	1/1:4,1:5:9.02:221,9,0	1/1:7,0:7:9.02:123,9,0
chr10	81188455	.	GT	G	3158.11	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.418;DP=510;FS=0.000;HRun=3;HaplotypeScore=76.6214;InbreedingCoeff=0.9975;MQ=87.66;MQ0=0;MQRankSum=-2.084;QD=32.23;ReadPosRankSum=2.917;VQSLOD=4.0054;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:33.11:0,33,475	0/0:10,0:10:30.10:0,30,432	0/0:18,0:18:51.16:0,51,715	0/0:20,0:20:48.86:0,49,711	0/0:15,0:15:45.14:0,45,630	1/1:1,21:22:54.17:669,54,0	0/0:9,0:9:27.07:0,27,367	0/0:21,0:21:60.19:0,60,834	1/1:0,21:21:60.19:744,60,0	0/0:28,0:28:84.28:0,84,1208	0/0:17,0:17:51.13:0,51,680	1/1:0,17:17:48.15:595,48,0	0/0:26,0:26:75.24:0,75,1052	0/0:26,0:26:75.23:0,75,1042	0/0:18,0:17:54.18:0,54,776	0/0:19,0:19:57.19:0,57,818	0/0:13,0:13:39.12:0,39,541	0/0:6,0:6:18.06:0,18,259	0/0:23,0:23:60.18:0,60,830	0/0:17,0:17:51.17:0,51,730	0/0:17,0:17:45.15:0,45,648	1/1:1,11:12:33.10:409,33,0	1/1:0,13:13:39.12:483,39,0	1/1:0,13:13:36.11:446,36,0	0/0:25,0:25:75.22:0,75,1028	0/0:31,0:31:90.30:0,90,1295	0/0:34,0:34:99:0,99,1402	0/0:8,0:8:24.08:0,24,345
chr10	81188921	.	GT	G	11478.68	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=5.972;DP=563;FS=2.204;HRun=2;HaplotypeScore=69.4480;InbreedingCoeff=0.9985;MQ=93.84;MQ0=0;MQRankSum=-4.210;QD=35.76;ReadPosRankSum=-0.461;VQSLOD=5.0945;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.18:0,54,803	1/1:0,10:10:30.10:390,30,0	0/0:31,0:31:90.30:0,90,1350	0/0:18,0:18:51.16:0,51,742	1/1:0,22:22:60.20:779,60,0	0/0:22,0:22:66.22:0,66,989	0/0:14,0:14:42.14:0,42,630	1/1:0,28:28:81.25:1036,81,0	0/0:23,0:23:69.21:0,69,996	1/1:0,35:35:99:1349,105,0	1/1:0,32:32:90.29:1169,90,0	0/0:8,0:8:24.08:0,24,360	0/0:17,0:17:51.16:0,51,743	0/0:22,0:22:66.22:0,66,988	1/1:0,14:14:39.13:506,39,0	1/1:1,17:18:48.16:623,48,0	1/1:0,16:16:42.14:545,42,0	1/1:1,15:16:39.13:506,39,0	1/1:1,17:18:51.15:645,51,0	1/1:1,21:22:63.20:806,63,0	1/1:1,16:17:45.15:584,45,0	0/0:22,0:22:63.20:0,63,924	0/0:27,0:27:81.27:0,81,1212	0/0:20,0:20:60.20:0,60,899	1/1:0,19:19:48.16:623,48,0	1/1:1,25:26:75.21:943,75,0	1/1:0,22:22:57.19:740,57,0	1/1:0,6:6:18.06:234,18,0
chr10	81189227	.	C	CTT	8784.23	PASS	AB=0.611;AC=43;AF=0.768;AN=56;BaseQRankSum=-6.113;DP=435;FS=3.714;HRun=9;HaplotypeScore=58.3645;InbreedingCoeff=0.8715;MQ=70.11;MQ0=3;MQRankSum=-3.790;QD=25.76;ReadPosRankSum=2.248;VQSLOD=4.4794;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.07:0,42,436	1/1:1,3:4:9.03:139,9,0	0/0:19,0:16:38.76:0,39,378	0/0:13,0:10:14.59:0,15,111	1/1:1,14:17:45.07:629,45,0	1/1:2,0:22:39.80:137,40,0	0/0:11,0:13:32.80:0,33,323	1/1:8,24:31:72.01:1042,72,0	1/1:3,0:19:40.30:152,40,0	1/1:3,8:11:24.08:369,24,0	1/1:4,17:21:48.16:730,48,0	1/1:0,0:7:17.47:60,17,0	0/0:14,0:14:42.09:0,42,439	0/0:19,0:19:48.08:0,48,495	1/1:2,15:16:30.10:444,30,0	1/1:0,9:11:29.58:405,30,0	1/1:7,9:16:30.94:437,31,0	1/1:5,10:15:23.93:369,24,0	1/1:3,17:20:51.17:779,51,0	1/1:4,7:11:18.02:250,18,0	1/1:1,4:6:8.52:101,9,0	0/1:4,0:11:13.77:33,0,14	1/1:2,2:26:46.85:235,47,0	1/1:0,0:7:17.34:60,17,0	1/1:1,8:9:21.07:323,21,0	1/1:3,17:20:48.09:703,48,0	1/1:3,18:21:48.12:713,48,0	1/1:1,16:17:45.14:672,45,0
chr10	81189434	.	C	CT	4464.19	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-3.961;DP=305;FS=30.652;HRun=10;HaplotypeScore=43.2049;InbreedingCoeff=0.8178;MQ=59.32;MQ0=18;MQRankSum=1.303;QD=17.86;ReadPosRankSum=0.604;VQSLOD=3.2650;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:12:21.44:0,21,173	1/1:1,2:3:6.02:64,6,0	0/0:3,0:3:8.97:0,9,71	0/0:5,0:3:2.99:0,3,24	1/1:2,9:10:24.06:256,24,0	1/1:2,0:10:25.73:134,26,0	0/0:7,0:6:14.98:0,15,123	1/1:7,17:23:51.09:530,51,0	1/1:6,0:10:14.20:72,14,0	1/1:2,6:7:15.04:160,15,0	1/1:4,13:17:33.08:351,33,0	1/1:1,0:4:11.50:58,12,0	0/0:13,0:13:32.94:0,33,271	0/0:12,0:12:27.41:0,27,219	1/1:5,5:7:15.04:160,15,0	1/1:6,7:13:2.25:201,2,0	1/1:4,10:12:18.05:192,18,0	1/1:5,6:9:15.04:160,15,0	1/1:10,8:18:27.07:287,27,0	1/1:4,7:10:26.99:263,27,0	1/1:4,3:4:9.02:96,9,0	1/1:1,0:5:11.52:64,12,0	1/1:4,1:10:23.18:143,23,0	1/1:2,0:13:31.35:157,31,0	1/1:3,6:9:21.01:212,21,0	1/1:3,11:14:35.37:353,35,0	1/1:2,11:13:30.08:320,30,0	1/1:3,8:9:3.08:232,3,0
chr10	81197512	.	T	TTGTG	2549.14	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=8.377;DP=607;FS=14.831;HRun=0;HaplotypeScore=141.5746;InbreedingCoeff=0.7060;MQ=63.10;MQ0=8;MQRankSum=-8.789;QD=13.49;ReadPosRankSum=-1.717;VQSLOD=2.3779;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:27:69.47:413,0,69	0/0:9,0:9:23.98:0,24,240	0/0:33,0:26:26.20:0,26,432	0/0:28,0:22:50.59:0,51,584	0/0:29,0:29:77.11:0,77,722	1/1:21,0:21:11.44:340,11,0	0/0:17,0:17:45.10:0,45,652	0/0:32,0:32:46.06:0,46,646	1/1:17,0:17:18.06:365,18,0	0/0:34,0:34:87.01:0,87,909	0/0:21,0:21:45.03:0,45,483	1/1:22,1:23:18.06:355,18,0	0/1:17,0:17:46.83:190,0,47	0/1:15,0:15:99:151,0,150	0/0:19,0:19:45.03:0,45,461	0/0:20,0:20:51.09:0,51,551	0/0:19,0:19:39.05:0,39,429	0/0:26,0:26:50.12:0,50,1005	0/0:22,0:22:55.28:0,55,542	0/0:15,0:15:35.93:0,36,333	0/0:25,0:25:69.17:0,69,782	1/1:17,0:17:26.92:457,27,0	1/1:3,11:18:14.86:237,15,0	1/1:33,0:33:11.79:231,12,0	0/0:19,0:19:25.97:0,26,395	0/0:17,0:16:36.02:0,36,375	0/0:22,0:22:47.75:0,48,503	0/0:10,0:10:30.07:0,30,341
chr10	81197516	.	GTGTT	G	7270.20	PASS	AB=0.938;AC=31;AF=0.554;AN=56;BaseQRankSum=-3.816;DP=635;FS=0.000;HRun=0;HaplotypeScore=119.6472;InbreedingCoeff=0.9033;MQ=60.43;MQ0=10;MQRankSum=6.696;QD=22.79;ReadPosRankSum=2.907;VQSLOD=4.5169;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:35:48.12:0,48,761	1/1:4,5:9:12.04:193,12,0	0/0:30,0:22:15.03:0,15,206	0/0:29,0:22:24.06:0,24,446	1/1:9,20:29:57:789,57,0	0/0:2,0:23:18.06:0,18,291	0/1:14,1:15:12.06:12,0,681	1/1:20,9:29:27.02:338,27,0	0/0:2,0:26:18.06:0,18,306	1/1:10,21:31:57.15:865,57,0	1/1:5,13:18:36.03:520,36,0	0/0:5,0:28:18.06:0,18,292	0/0:6,0:20:21.07:0,21,364	0/0:9,0:20:18.06:0,18,314	1/1:8,12:20:24.08:385,24,0	1/1:7,14:21:33.11:530,33,0	1/1:6,13:19:15.13:453,15,0	0/0:26,1:27:11:0,11,1116	1/1:12,10:20:33.06:473,33,0	1/1:8,7:15:14.98:211,15,0	1/1:6,19:25:51.17:819,51,0	0/0:0,0:19:21.07:0,21,363	0/0:20,0:21:18.94:0,19,240	0/0:5,0:37:12:0,12,175	1/1:10,9:19:21.07:337,21,0	1/1:5,10:14:30.06:431,30,0	1/1:6,16:22:33.11:529,33,0	1/1:2,8:10:24.08:385,24,0
chr10	81197852	.	GAA	G	8235.87	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-6.214;DP=506;FS=1.157;HRun=10;HaplotypeScore=76.3151;InbreedingCoeff=0.9561;MQ=80.09;MQ0=0;MQRankSum=-0.483;QD=27.18;ReadPosRankSum=3.050;VQSLOD=5.1644;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:19:47.58:0,48,650	1/1:2,7:9:12.02:134,12,0	0/0:21,0:21:44.87:0,45,605	0/0:9,0:9:0.43:0,0,132	1/1:2,23:26:65.89:715,66,0	0/0:1,0:27:62.88:0,63,231	0/0:9,0:9:24.08:0,24,381	1/1:1,30:31:90.24:1003,90,0	0/0:1,0:12:27.45:0,27,94	1/1:2,23:25:69.16:753,69,0	1/1:2,19:22:53.87:580,54,0	0/0:1,0:11:22.46:0,22,77	0/0:20,0:20:54.18:0,54,837	0/0:19,0:19:54.18:0,54,857	1/1:2,22:25:56.88:614,57,0	1/1:2,20:22:57.15:635,57,0	1/1:1,9:10:27.07:301,27,0	1/1:0,6:6:15.04:167,15,0	1/1:3,14:17:42.05:446,42,0	1/1:2,18:21:39:493,39,0	1/1:0,17:17:42.11:468,42,0	0/0:2,1:25:21.96:0,22,147	0/0:2,0:21:47.92:0,48,202	0/0:0,0:10:19.96:0,20,69	1/1:2,16:18:36.09:400,36,0	1/1:2,16:18:48.11:524,48,0	1/1:4,24:28:66.17:736,66,0	1/1:0,8:8:24.06:268,24,0
chr10	81198246	.	GAA	G	6854.69	PASS	AB=0.571;AC=31;AF=0.554;AN=56;BaseQRankSum=1.038;DP=475;FS=1.252;HRun=11;HaplotypeScore=68.3891;InbreedingCoeff=0.9184;MQ=76.56;MQ0=4;MQRankSum=-0.167;QD=23.64;ReadPosRankSum=1.455;VQSLOD=4.6442;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:19:32.79:0,33,122	1/1:2,7:9:8.92:96,9,0	0/0:24,0:20:24.08:0,24,387	0/0:13,0:11:22.73:0,23,260	1/1:2,27:27:63.03:653,63,0	0/0:16,0:16:45.14:0,45,672	0/0:9,0:9:27.09:0,27,414	1/1:7,19:26:54.07:575,54,0	0/0:4,0:5:14.54:0,15,193	1/1:1,20:21:60.09:618,60,0	1/1:2,20:22:34.23:508,34,0	0/0:16,0:17:48.15:0,48,701	0/0:3,0:18:43.43:0,43,197	0/0:0,0:13:27.17:0,27,92	1/1:2,14:15:27.06:288,27,0	1/1:2,12:13:30.06:319,30,0	1/1:2,13:15:33.07:351,33,0	0/1:2,6:8:11.25:170,0,11	1/1:1,16:17:38.98:476,39,0	1/1:1,20:21:60.15:638,60,0	1/1:2,11:13:27.06:287,27,0	0/0:13,0:13:30.09:0,30,442	0/0:17,0:17:34.67:0,35,512	0/0:20,0:20:51.17:0,51,785	1/1:2,24:26:51.12:543,51,0	1/1:1,23:24:69.16:727,69,0	1/1:2,18:20:42.07:447,42,0	1/1:4,5:9:15.02:160,15,0
chr10	81199039	.	TA	T	1138.98	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.889;DP=491;FS=0.000;HRun=6;HaplotypeScore=47.8212;InbreedingCoeff=0.9108;MQ=58.92;MQ0=2;MQRankSum=0.311;QD=21.09;ReadPosRankSum=0.849;VQSLOD=2.6509;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:27:20.83:571,21,0	0/0:3,0:3:9.03:0,9,118	0/0:8,0:5:11.71:0,12,130	0/0:12,0:4:3.37:0,3,28	0/0:17,0:17:51.17:0,51,668	0/0:13,0:13:33.06:0,33,415	0/0:10,0:10:27.09:0,27,352	0/0:32,0:29:84.26:0,84,1091	0/0:21,0:21:57.16:0,57,723	0/0:20,0:20:54.17:0,54,698	0/0:20,0:20:57.19:0,57,750	0/0:7,0:7:21.06:0,21,262	1/1:2,12:14:36.09:387,36,0	1/1:3,10:13:30.07:322,30,0	0/0:20,0:20:54.18:0,54,711	0/0:20,0:20:54.17:0,54,700	0/0:22,0:21:56.97:0,57,710	0/0:21,0:21:63.20:0,63,828	0/0:25,0:24:60.18:0,60,774	0/0:25,0:25:66.21:0,66,868	0/0:15,0:15:36.12:0,36,474	0/0:14,0:14:36.11:0,36,458	0/0:10,0:10:27.09:0,27,350	0/0:11,0:11:30.10:0,30,395	0/0:22,0:22:66.21:0,66,869	0/0:26,0:25:69.21:0,69,892	0/0:25,0:25:66.17:0,66,832	0/0:18,0:18:54.11:0,54,648
chr10	81201689	.	GA	G	497.01	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.710;DP=362;FS=4.051;HRun=8;HaplotypeScore=34.2092;InbreedingCoeff=0.8699;MQ=67.08;MQ0=0;MQRankSum=0.321;QD=16.57;ReadPosRankSum=1.764;VQSLOD=2.9782;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:12:27.04:261,27,0	0/0:5,0:5:15.05:0,15,181	0/0:6,0:5:15.03:0,15,153	0/0:3,0:3:2.07:0,2,31	0/0:20,0:20:45.14:0,45,544	0/0:7,0:7:18.06:0,18,217	0/0:7,0:7:21.06:0,21,244	0/0:17,0:17:42.12:0,42,497	0/0:10,0:10:30.09:0,30,362	0/0:19,0:19:54.17:0,54,652	0/0:26,0:26:66.20:0,66,797	0/0:13,0:13:33.10:0,33,399	1/1:1,7:8:18.03:173,18,0	1/1:0,10:10:21.03:203,21,0	0/0:12,0:12:36.11:0,36,435	0/0:10,0:10:27.08:0,27,326	0/0:18,0:18:50.97:0,51,563	0/0:19,0:19:48.08:0,48,547	0/0:21,1:22:31.20:0,31,659	0/0:29,0:29:84.25:0,84,1006	0/0:6,0:6:15.05:0,15,181	0/0:6,0:6:18.05:0,18,208	0/0:14,0:14:42.12:0,42,496	0/0:3,0:3:9.03:0,9,109	0/0:8,0:8:24.05:0,24,277	0/0:23,0:23:66.20:0,66,795	0/0:26,0:26:66.20:0,66,796	0/0:3,0:3:9.03:0,9,109
chr10	81202424	.	AACAC	A	5045.66	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-3.422;DP=458;FS=6.684;HRun=0;HaplotypeScore=158.6987;InbreedingCoeff=0.7072;MQ=54.75;MQ0=16;MQRankSum=5.117;QD=22.63;ReadPosRankSum=3.849;VQSLOD=4.1665;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:18:12.04:0,12,167	1/1:7,0:7:12.04:193,12,0	0/0:27,0:17:35.61:0,36,540	0/0:35,0:24:49.28:0,49,778	1/1:22,0:22:39.74:597,40,0	0/0:24,0:23:27.08:0,27,351	0/0:19,0:19:1.76:0,2,12	1/1:8,18:26:54.01:663,54,0	0/0:21,0:19:27.05:0,27,321	1/1:21,0:20:42.05:633,42,0	1/1:2,9:10:3.01:34,3,0	0/0:15,0:15:12.51:0,13,191	0/0:19,0:18:32.01:0,32,331	0/0:12,0:11:15.47:0,15,146	1/1:11,0:10:3.01:48,3,0	1/1:9,0:9:24.05:335,24,0	1/1:11,0:10:24.04:356,24,0	1/1:5,0:4:6.02:91,6,0	1/1:5,9:12:27:329,27,0	1/1:3,10:13:3.01:36,3,0	1/1:10,0:8:12.04:195,12,0	0/0:18,0:16:3.01:0,3,33	0/0:15,0:15:6.02:0,6,68	0/0:11,0:11:2.75:0,3,24	1/1:14,0:14:27.09:436,27,0	1/1:19,0:17:3.46:456,3,0	1/1:13,0:12:20.94:297,21,0	0/1:17,0:16:46.75:346,0,47
chr10	81202465	.	A	AAG	948.04	PASS	AB=0.930;AC=8;AF=0.148;AN=54;BaseQRankSum=5.317;DP=387;FS=29.458;HRun=0;HaplotypeScore=106.2765;InbreedingCoeff=0.4257;MQ=40.20;MQ0=39;MQRankSum=-2.295;QD=9.77;ReadPosRankSum=-4.376;VQSLOD=1.2066;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:7.27:0,7,95	0/0:5,0:5:8.33:0,8,124	0/0:2,0:1:3.01:0,3,37	./.	0/0:21,0:17:23.09:0,23,364	0/1:25,0:24:80.45:279,0,80	0/0:13,0:12:16.47:0,16,237	0/0:14,0:13:36.06:0,36,413	0/1:11,7:16:0.35:130,0,0	0/0:17,0:16:47.12:0,47,567	0/0:15,0:13:2.89:0,3,39	0/1:12,0:12:26.72:114,0,27	0/0:15,0:14:26.59:0,27,361	0/0:15,0:14:20.63:0,21,282	0/0:13,0:9:8.59:0,9,91	0/0:12,0:12:12.51:0,13,170	0/0:18,0:16:35.51:0,36,455	0/0:9,0:7:17.89:0,18,256	0/0:19,0:14:32.10:0,32,374	0/0:10,0:7:6.01:0,6,61	0/0:11,0:7:12.04:0,12,186	1/1:16,0:15:24.04:307,24,0	0/1:12,0:12:2.64:170,0,3	1/1:8,6:13:9.39:88,9,0	0/0:6,0:6:15.05:0,15,231	0/0:19,0:14:40.37:0,40,527	0/0:12,0:11:26.60:0,27,332	0/0:14,0:9:27.08:0,27,361
chr10	81202492	.	GAGAGAGAA	G	344.70	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=5.447;DP=489;FS=10.695;HRun=0;HaplotypeScore=129.9559;InbreedingCoeff=0.5739;MQ=53.83;MQ0=33;MQRankSum=0.408;QD=5.30;ReadPosRankSum=1.882;VQSLOD=1.9763;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:22:2.94:18,3,0	0/0:13,0:13:33.17:0,33,268	0/0:18,0:8:23.95:0,24,225	0/0:22,0:12:33.03:0,33,338	0/0:29,0:25:44.79:0,45,393	0/0:20,0:20:47.70:0,48,373	0/0:15,0:14:29.58:0,30,237	0/0:25,0:25:38.57:0,39,493	0/0:15,0:13:11.95:0,12,125	0/0:22,0:22:61.68:0,62,567	0/0:18,0:17:31.86:0,32,300	0/0:13,0:13:29.93:0,30,267	1/1:17,0:17:36.87:296,37,0	0/1:14,0:14:99:147,0,119	0/0:13,0:11:23.77:0,24,216	0/0:8,0:8:15:0,15,139	0/0:17,0:15:38.70:0,39,316	0/1:11,0:9:0.54:1,0,165	0/0:19,0:17:47.60:0,48,392	0/0:23,0:20:47.35:0,47,384	0/0:14,0:11:21.90:0,22,191	0/0:22,0:22:50.85:0,51,425	0/0:13,0:13:32.86:0,33,262	0/0:13,0:12:11.87:0,12,83	0/0:12,0:12:32.81:0,33,257	0/0:25,0:22:65.96:0,66,870	0/0:12,0:11:14.02:0,14,255	0/0:23,0:21:61.26:0,61,782
chr10	81203806	.	TTC	T	75.38	PASS	AB=0.982;AC=14;AF=0.292;AN=48;BaseQRankSum=-1.381;DP=426;FS=64.894;HRun=0;HaplotypeScore=119.3283;InbreedingCoeff=-0.1106;MQ=46.27;MQ0=22;MQRankSum=-2.885;QD=0.41;ReadPosRankSum=-1.735;VQSLOD=-0.5058;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,4:17:37.81:38,0,88	0/1:6,0:6:15.42:15,0,79	0/1:34,0:7:1.89:17,0,2	0/0:33,0:11:4.33:0,4,50	0/0:26,0:26:9.60:0,10,204	./.	0/0:18,0:14:19.80:0,20,404	0/1:21,0:21:19.56:20,0,242	1/1:2,0:2:2.97:20,3,0	0/0:24,0:24:35.12:0,35,369	0/0:20,0:19:2.48:0,2,186	./.	0/1:5,0:4:16.04:24,0,16	0/0:8,0:6:5.07:0,5,33	0/0:18,0:15:12.46:0,12,194	0/0:15,0:14:38:0,38,259	0/1:17,0:15:11.65:12,0,119	0/1:17,0:16:24.98:25,0,135	0/1:19,0:16:9.10:9,0,215	0/0:20,0:20:40.54:0,41,326	0/0:9,0:9:22.16:0,22,156	1/1:7,0:3:0.89:2,1,0	./.	./.	0/0:20,0:16:22.12:0,22,187	0/0:28,0:25:18.23:0,18,315	0/1:25,0:24:10.84:11,0,244	0/1:11,0:10:18.26:18,0,53
chr10	81204513	.	AG	A	256.13	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=4.776;DP=525;FS=9.149;HRun=1;HaplotypeScore=59.3559;InbreedingCoeff=0.9002;MQ=42.30;MQ0=98;MQRankSum=-1.616;QD=23.28;ReadPosRankSum=-1.319;VQSLOD=2.3826;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:8:18.06:0,18,287	0/0:6,0:6:18.03:0,18,260	./.	./.	0/0:27,0:19:45.15:0,45,718	0/0:26,0:23:45.15:0,45,719	1/1:0,11:11:27.09:350,27,0	0/0:29,0:16:48.16:0,48,767	0/0:7,0:6:9.03:0,9,143	0/0:25,0:21:63.21:0,63,1007	0/0:30,0:27:54.18:0,54,858	0/0:16,0:13:30.10:0,30,479	0/0:20,0:19:45.15:0,45,718	0/0:14,0:13:36.12:0,36,572	0/0:17,0:14:36.09:0,36,528	0/0:19,0:17:45.14:0,45,695	0/0:9,0:8:18.06:0,18,282	0/0:11,0:8:18.06:0,18,283	0/0:17,0:15:45.11:0,45,685	0/0:32,0:27:78.27:0,78,1245	0/0:12,0:9:24.08:0,24,383	0/0:19,0:17:39.13:0,39,620	0/0:26,0:22:48.15:0,48,741	0/0:12,0:10:15.05:0,15,240	0/0:30,0:23:57.18:0,57,886	0/0:32,0:27:81.28:0,81,1295	0/0:42,0:34:81.28:0,81,1293	0/0:14,0:14:36.12:0,36,575
chr10	81204556	.	T	TA	4903.13	PASS	AC=38;AF=0.826;AN=46;BaseQRankSum=-2.520;DP=488;FS=0.000;HRun=7;HaplotypeScore=39.6403;InbreedingCoeff=0.7799;MQ=31.45;MQ0=156;MQRankSum=-1.909;QD=12.57;ReadPosRankSum=-0.623;VQSLOD=2.7688;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,6:4:3.01:36,3,0	0/0:4,0:4:12.02:0,12,116	./.	./.	1/1:3,29:19:21.02:237,21,0	1/1:2,20:16:15.05:181,15,0	1/1:3,0:10:23.09:122,23,0	1/1:6,19:22:54.17:652,54,0	1/1:2,9:8:11.90:123,12,0	1/1:5,16:13:24.07:290,24,0	1/1:4,24:20:24.03:273,24,0	1/1:2,11:8:6.02:72,6,0	0/0:17,0:13:12.01:0,12,116	0/0:17,0:14:15.02:0,15,145	1/1:2,13:8:15.05:181,15,0	1/1:2,18:15:1.16:297,1,0	./.	1/1:2,5:5:3.01:36,3,0	1/1:5,12:13:27.04:299,27,0	1/1:4,27:21:45.14:543,45,0	./.	0/0:21,0:16:21.03:0,21,203	1/1:1,25:17:17.81:201,18,0	./.	1/1:3,24:18:27.08:326,27,0	1/1:9,20:21:39.08:455,39,0	1/1:8,28:23:30.09:362,30,0	1/1:1,9:9:18.06:217,18,0
chr10	81207964	.	A	ATGAAT	38623.12	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-8.675;DP=608;FS=14.015;HRun=0;HaplotypeScore=90.1601;InbreedingCoeff=0.9886;MQ=70.59;MQ0=0;MQRankSum=-5.248;QD=68.48;ReadPosRankSum=3.368;VQSLOD=5.5377;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,23:30:66.22:1957,66,0	0/0:11,0:11:30.10:0,30,588	0/0:15,0:15:35.49:0,35,530	0/0:10,0:9:21.06:0,21,364	1/1:4,24:29:66.22:1793,66,0	1/1:3,18:21:51.17:1557,51,0	0/0:8,0:8:24.08:0,24,492	1/1:9,18:30:72.25:2030,72,0	1/1:8,27:35:78.27:2324,78,0	1/1:6,20:28:75.26:2115,75,0	1/1:5,11:16:39.13:1176,39,0	1/1:3,17:20:54.19:1632,54,0	1/1:5,14:19:42.10:1210,42,0	1/1:2,14:16:36.12:1044,36,0	1/1:7,16:24:48.16:1464,48,0	1/1:8,18:26:51.17:1555,51,0	1/1:1,22:24:60.21:1831,60,0	1/1:3,7:12:27.09:769,27,0	1/1:6,9:16:36.09:997,36,0	1/1:10,23:35:90.26:2401,90,0	1/1:6,4:10:12.04:366,12,0	1/1:2,15:17:48.16:1353,48,0	1/1:4,23:28:72.25:2143,72,0	1/1:3,9:12:24.08:732,24,0	1/1:8,30:39:78.27:2380,78,0	1/1:5,18:23:60.20:1777,60,0	1/1:5,31:38:93.32:2825,93,0	1/1:2,13:15:39.13:1190,39,0
chr10	81208787	.	AAT	A	92.01	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-0.649;DP=433;FS=0.000;HRun=0;HaplotypeScore=101.4033;InbreedingCoeff=0.7793;MQ=68.37;MQ0=9;MQRankSum=-0.517;QD=4.38;ReadPosRankSum=0.191;VQSLOD=2.3833;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:4:5.49:47,5,0	0/0:5,0:5:15.05:0,15,303	0/0:25,0:21:62.16:0,62,1038	0/0:27,0:16:45.10:0,45,816	0/0:20,0:20:19.40:0,19,149	0/0:22,0:22:59.84:0,60,592	0/0:12,0:12:33.41:0,33,581	0/0:27,0:27:77.38:0,77,569	0/0:15,0:15:41.78:0,42,395	0/0:20,0:20:52.65:0,53,383	0/0:13,0:13:28.85:0,29,223	0/0:11,0:11:29.77:0,30,251	1/1:0,8:8:3.01:44,3,0	1/1:7,0:7:15.44:121,15,0	0/0:22,0:22:3.11:0,3,8	0/0:9,0:9:3.75:0,4,11	0/0:9,0:8:19.60:0,20,127	0/0:11,0:10:29.19:0,29,197	0/0:14,0:13:36.26:0,36,239	0/0:20,0:20:39.73:0,40,282	0/0:13,0:13:35.57:0,36,249	0/0:13,0:13:35.14:0,35,277	0/0:20,0:20:27.43:0,27,298	0/0:18,0:18:47.85:0,48,488	0/0:19,0:18:15.15:0,15,92	0/0:22,0:20:40.05:0,40,345	0/0:11,0:11:32.81:0,33,244	0/0:14,0:14:41.76:0,42,309
chr10	81208788	.	ATGTATG	A	5086.85	PASS	AB=0.943;AC=38;AF=0.679;AN=56;BaseQRankSum=-2.258;DP=446;FS=26.668;HRun=0;HaplotypeScore=116.2938;InbreedingCoeff=0.2431;MQ=67.53;MQ0=10;MQRankSum=1.576;QD=13.82;ReadPosRankSum=3.707;VQSLOD=2.5205;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:4:5.99:48,6,0	0/0:5,0:5:15:0,15,225	0/0:25,0:21:32.92:0,33,427	0/0:27,0:16:44.99:0,45,452	1/1:1,19:20:3.01:60,3,0	0/1:25,0:24:99:113,0,426	0/0:13,0:13:33.12:0,33,273	1/1:28,0:27:74.84:631,75,0	0/1:13,0:13:99:109,0,295	0/1:3,16:19:34.84:394,0,35	1/1:10,1:13:26.89:249,27,0	0/1:12,0:12:76.83:180,0,77	0/0:8,0:8:3:0,3,26	1/1:7,0:7:11.98:97,12,0	1/1:0,22:22:5.89:140,6,0	1/1:0,8:9:5.70:122,6,0	1/1:9,0:9:18.40:167,18,0	1/1:11,0:10:29.79:218,30,0	1/1:1,0:13:38.86:333,39,0	1/1:2,18:20:20.90:333,21,0	1/1:13,0:13:29.96:279,30,0	0/1:16,0:16:99:165,0,174	0/1:23,0:23:68.95:69,0,247	0/1:19,0:19:99:109,0,304	1/1:2,18:20:14.84:346,15,0	1/1:4,18:20:42.72:365,43,0	1/1:11,0:11:29.96:271,30,0	0/1:15,0:15:19.80:289,0,20
chr10	81208819	.	T	TGA	1043.21	PASS	AB=0.825;AC=8;AF=0.143;AN=56;BaseQRankSum=5.080;DP=502;FS=16.898;HRun=0;HaplotypeScore=124.4491;InbreedingCoeff=0.2671;MQ=52.95;MQ0=20;MQRankSum=-1.024;QD=7.96;ReadPosRankSum=3.255;VQSLOD=2.4679;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:14:12.86:0,13,99	0/0:6,0:6:14.99:0,15,144	0/0:17,0:9:4.68:0,5,65	0/0:27,0:12:29.83:0,30,267	0/0:26,0:25:29.93:0,30,244	0/1:28,0:27:53.79:306,0,54	0/0:14,0:14:29.22:0,29,244	0/0:28,0:26:58.70:0,59,572	1/1:14,0:14:0.30:271,0,0	0/0:15,0:14:41.81:0,42,358	0/0:8,0:8:11.86:0,12,86	0/1:8,10:18:31.90:32,0,98	0/0:8,0:8:8.37:0,8,65	0/0:8,0:8:11.98:0,12,99	0/0:22,0:22:17.98:0,18,152	0/0:16,0:16:26.68:0,27,228	0/0:9,0:8:17.69:0,18,125	0/0:12,0:10:29.81:0,30,221	0/0:11,0:10:23.90:0,24,194	0/0:25,0:25:37.58:0,38,283	0/0:21,0:17:29.87:0,30,236	0/1:18,0:18:21.93:197,0,22	1/1:28,0:28:29.38:254,29,0	0/1:12,11:24:62.45:119,0,62	0/0:28,0:26:40.16:0,40,339	0/0:26,0:24:69.79:0,70,524	0/0:11,0:11:32.94:0,33,276	0/0:16,0:16:33.73:0,34,259
chr10	81208821	.	T	TGA	1112.46	PASS	AB=0.836;AC=8;AF=0.143;AN=56;BaseQRankSum=2.520;DP=501;FS=14.804;HRun=0;HaplotypeScore=124.8655;InbreedingCoeff=0.4481;MQ=52.98;MQ0=19;MQRankSum=-1.655;QD=8.49;ReadPosRankSum=5.018;VQSLOD=2.5459;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:15:12.44:0,12,96	0/0:7,0:7:17.99:0,18,168	0/0:18,0:10:23.84:0,24,219	0/0:27,0:12:29.63:0,30,264	0/0:22,0:21:29.96:0,30,249	0/1:23,6:28:27.24:323,0,27	0/0:17,0:17:38.20:0,38,317	0/0:28,0:26:63.90:0,64,552	1/1:10,5:15:9.74:273,10,0	0/0:17,0:16:44.86:0,45,387	0/0:8,0:8:11.84:0,12,85	0/1:19,0:18:13:99,0,13	0/0:9,0:9:11.92:0,12,100	0/0:8,0:8:11.97:0,12,96	0/0:22,0:22:17.99:0,18,153	0/0:16,0:16:26.68:0,27,228	0/0:9,0:8:17.24:0,17,118	0/0:12,0:10:26.79:0,27,193	0/0:10,0:10:26.89:0,27,217	0/0:27,0:27:47.14:0,47,358	0/0:19,0:15:29.86:0,30,237	1/1:16,2:18:5.93:205,6,0	0/1:12,15:28:5.96:160,0,6	0/1:19,3:22:2.97:189,0,3	0/0:27,0:25:39.98:0,40,337	0/0:26,0:24:69.27:0,69,533	0/0:12,0:12:32.92:0,33,272	0/0:11,0:11:30.32:0,30,234
chr10	81208840	.	G	GTT	6904.81	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=8.554;DP=469;FS=0.000;HRun=2;HaplotypeScore=116.9554;InbreedingCoeff=0.8994;MQ=74.66;MQ0=12;MQRankSum=-4.117;QD=19.40;ReadPosRankSum=1.455;VQSLOD=2.6572;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:31.72:0,32,251	0/0:6,0:6:17.94:0,18,158	0/0:28,0:20:56.78:0,57,545	0/0:30,0:22:56.83:0,57,505	1/1:19,0:19:49.77:420,50,0	1/1:22,6:28:74.15:690,74,0	0/0:16,0:16:44.55:0,45,368	1/1:27,0:26:74.84:644,75,0	1/1:11,5:16:48.08:520,48,0	0/1:15,0:14:11.77:199,0,12	1/1:10,0:10:17:133,17,0	1/1:15,0:15:15.02:162,15,0	0/0:6,0:6:17.92:0,18,137	0/0:8,0:8:14.96:0,15,121	1/1:14,0:14:19.05:143,19,0	1/1:14,0:14:31.40:253,31,0	1/1:9,0:8:18.56:113,19,0	1/1:11,0:10:29.89:237,30,0	1/1:8,0:8:22.51:173,23,0	1/1:23,0:23:54.94:413,55,0	1/1:15,0:12:26.93:228,27,0	1/1:17,2:19:49.74:470,50,0	1/1:22,3:25:65.85:607,66,0	1/1:20,3:23:23.07:276,23,0	1/1:25,0:24:57.91:451,58,0	1/1:23,0:21:45.74:411,46,0	1/1:9,0:9:23.67:195,24,0	1/1:7,0:7:20.59:167,21,0
chr10	81209265	.	T	TA	1229.55	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.393;DP=589;FS=1.309;HRun=7;HaplotypeScore=54.4649;InbreedingCoeff=0.9967;MQ=88.05;MQ0=0;MQRankSum=-3.583;QD=25.62;ReadPosRankSum=2.725;VQSLOD=4.2355;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:45.14:544,45,0	0/0:8,0:8:21.03:0,21,203	0/0:25,0:25:30.38:0,30,380	0/0:17,0:17:35.95:0,36,328	0/0:37,0:37:99:0,102,971	0/0:36,0:36:99:0,99,942	0/0:12,0:12:36.04:0,36,341	0/0:31,0:31:81.12:0,81,782	0/0:15,0:15:42.07:0,42,406	0/0:36,0:36:99:0,99,956	0/0:24,0:24:60.06:0,60,569	0/0:15,0:15:39.06:0,39,377	1/1:2,14:16:39.12:466,39,0	1/1:1,14:15:30.09:362,30,0	0/0:13,0:13:36.05:0,36,348	0/0:28,0:28:69.09:0,69,660	0/0:11,0:11:30.04:0,30,289	0/0:8,0:8:24.02:0,24,224	0/0:20,0:20:45.06:0,45,435	0/0:29,0:29:81.13:0,81,782	0/0:17,0:17:48.08:0,48,463	0/0:16,0:16:45.07:0,45,435	0/0:23,0:23:63.08:0,63,603	0/0:12,0:12:27.02:0,27,256	0/0:26,0:26:72.11:0,72,695	0/0:39,0:39:96.14:0,96,926	0/0:28,0:28:78.10:0,78,744	0/0:15,0:15:42.06:0,42,400
chr10	81211484	.	A	AG	22857.84	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-10.539;DP=618;FS=3.996;HRun=0;HaplotypeScore=55.4339;InbreedingCoeff=0.9827;MQ=79.84;MQ0=0;MQRankSum=-4.524;QD=40.74;ReadPosRankSum=4.610;VQSLOD=5.2967;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,8:10:14.99:383,15,0	0/0:13,0:13:39.12:0,39,529	0/0:16,0:16:21.71:0,22,585	0/0:14,0:14:32.05:0,32,426	1/1:0,42:42:99:1785,117,0	1/1:1,21:22:60.20:938,60,0	0/0:14,0:14:42.14:0,42,585	1/1:0,37:37:99:1701,111,0	1/1:0,33:33:84.29:1314,84,0	1/1:1,25:26:75.26:1166,75,0	1/1:0,21:21:60.13:896,60,0	1/1:1,17:18:16.92:453,17,0	1/1:0,26:26:57.19:891,57,0	1/1:0,13:13:30.10:469,30,0	1/1:0,19:19:51.17:798,51,0	1/1:0,24:24:63.20:985,63,0	1/1:0,18:18:48.16:749,48,0	1/1:0,4:4:12.04:187,12,0	1/1:0,29:29:87.27:1312,87,0	1/1:0,39:39:99:1529,108,0	1/1:0,12:12:27.09:422,27,0	1/1:0,22:22:62.96:879,63,0	1/1:2,25:27:60.20:937,60,0	1/1:1,15:16:42.14:657,42,0	1/1:0,24:24:66.22:1032,66,0	1/1:0,25:25:74.84:1122,75,0	1/1:0,34:31:90.31:1406,90,0	1/1:0,20:20:54.18:844,54,0
chr10	81213988	.	AT	A	2421.07	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=6.081;DP=524;FS=0.000;HRun=11;HaplotypeScore=105.0046;InbreedingCoeff=0.9064;MQ=64.55;MQ0=0;MQRankSum=1.922;QD=12.17;ReadPosRankSum=2.855;VQSLOD=3.4363;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:23:26.42:89,26,0	0/0:8,0:8:18.04:0,18,186	0/1:13,0:10:6.73:7,0,99	0/0:7,0:6:8.05:0,8,71	0/0:35,1:36:65.64:0,66,903	1/1:4,21:26:61.95:498,62,0	1/1:3,16:20:46.98:375,47,0	0/0:31,1:32:29.94:0,30,509	1/1:4,12:16:6.97:264,7,0	0/0:23,1:24:38.50:0,38,604	0/0:27,0:27:63.15:0,63,666	1/1:3,13:16:41.94:345,42,0	1/1:0,0:17:17.40:67,17,0	1/1:4,0:19:28.51:82,29,0	0/0:20,0:20:51.13:0,51,544	0/0:13,0:13:33.07:0,33,344	0/0:18,0:18:39.10:0,39,416	0/0:19,0:21:53.98:0,54,547	0/0:17,1:19:26.32:0,26,469	0/0:33,0:35:92.89:0,93,950	0/0:14,0:14:36.07:0,36,374	1/1:1,12:13:32.96:271,33,0	1/1:3,17:20:44.58:369,45,0	1/1:2,14:16:32.96:271,33,0	0/0:13,1:14:36.08:0,36,378	0/0:19,0:19:39.10:0,39,416	0/0:13,0:13:33.06:0,33,341	0/0:5,0:5:12.49:0,12,121
chr10	81214507	.	GTGTGTGTGTGTA	G	4467.67	PASS	AB=0.947;AC=31;AF=0.554;AN=56;BaseQRankSum=4.169;DP=505;FS=77.935;HRun=0;HaplotypeScore=154.4469;InbreedingCoeff=0.2906;MQ=57.47;MQ0=12;MQRankSum=-0.615;QD=12.80;ReadPosRankSum=3.718;VQSLOD=1.0140;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:32:51.90:221,0,52	0/0:6,0:6:12:0,12,236	0/0:22,0:15:44.99:0,45,437	0/0:27,0:19:50.10:0,50,509	1/1:12,0:11:7.88:95,8,0	0/1:22,0:22:99:194,0,340	0/0:15,0:15:32.92:0,33,627	0/1:14,0:14:9.08:196,0,9	0/0:17,0:16:15:0,15,271	1/1:13,0:12:19.18:207,19,0	1/1:10,1:11:6.02:103,6,0	0/0:14,0:14:15.05:0,15,290	0/1:16,1:17:99:261,0,296	0/0:22,0:22:15.52:0,16,388	0/1:10,15:25:15.90:213,0,16	1/1:14,2:16:30.06:599,30,0	1/1:16,0:16:19.87:137,20,0	1/1:8,0:7:5.88:76,6,0	1/1:5,8:13:21.61:373,22,0	0/1:24,0:23:71.11:81,0,71	1/1:18,0:17:21.46:304,21,0	0/1:14,0:14:67.02:67,0,100	0/1:15,0:15:39.90:40,0,382	0/0:33,0:32:15.05:0,15,386	1/1:28,0:28:41.57:369,42,0	1/1:2,14:16:38.19:512,38,0	0/1:20,1:20:25.86:380,0,26	1/1:11,0:10:5.27:40,5,0
chr10	81214509	.	GTGTGTGTGTA	G	4480.75	PASS	AB=0.968;AC=34;AF=0.607;AN=56;BaseQRankSum=4.758;DP=501;FS=55.373;HRun=0;HaplotypeScore=140.7294;InbreedingCoeff=0.4601;MQ=60.95;MQ0=12;MQRankSum=-0.499;QD=13.14;ReadPosRankSum=3.452;VQSLOD=2.0567;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:33:44.18:364,44,0	0/0:6,0:6:12:0,12,210	0/0:25,0:18:54.02:0,54,532	0/0:28,0:20:53.09:0,53,533	1/1:12,0:11:11.01:95,11,0	0/1:24,0:24:99:298,0,134	0/0:15,0:15:32.92:0,33,541	1/1:16,0:16:19.85:275,20,0	0/0:17,0:16:7.50:0,7,148	1/1:12,0:11:19.95:161,20,0	1/1:10,0:10:3.48:38,3,0	0/0:14,0:14:14.99:0,15,175	0/1:15,1:16:99:276,0,150	0/0:22,0:22:15.52:0,16,247	0/1:23,0:23:14.80:149,0,15	1/1:17,0:17:33.03:454,33,0	1/1:14,0:14:24.66:175,25,0	1/1:6,0:5:8.85:63,9,0	1/1:13,0:13:22.72:352,23,0	1/1:6,17:22:4.56:83,5,0	1/1:19,0:18:23.13:225,23,0	0/1:15,0:15:25.02:161,0,25	0/1:14,0:14:40.21:40,0,274	0/0:33,0:32:15.05:0,15,256	1/1:28,0:28:41.73:337,42,0	1/1:16,0:15:17.72:422,18,0	0/1:17,3:19:25.05:472,0,25	1/1:8,0:7:5.58:40,6,0
chr10	81214511	.	GTGTGTGTA	G	4465.70	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=4.287;DP=471;FS=36.958;HRun=0;HaplotypeScore=119.6044;InbreedingCoeff=0.4770;MQ=65.26;MQ0=12;MQRankSum=-0.388;QD=13.66;ReadPosRankSum=3.802;VQSLOD=2.0100;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:29:43.73:333,44,0	0/0:6,0:6:12:0,12,184	0/0:25,0:18:54.02:0,54,532	0/0:31,0:23:55.25:0,55,576	1/1:8,0:7:11.41:95,11,0	0/1:25,0:25:25.63:382,0,26	0/0:13,0:13:35.91:0,36,492	1/1:17,0:17:47.75:369,48,0	1/1:6,12:17:3:51,3,0	1/1:9,0:9:26.85:218,27,0	1/1:9,0:9:2.94:18,3,0	0/0:16,0:16:5.79:0,6,38	0/1:15,0:15:12.62:273,0,13	0/0:21,0:21:8.75:0,9,86	1/1:18,0:18:5.51:129,6,0	1/1:13,0:13:32.98:385,33,0	1/1:13,0:13:26.77:196,27,0	1/1:6,0:5:11.28:61,11,0	1/1:11,0:11:24.01:302,24,0	0/1:23,0:22:12.90:59,0,13	1/1:17,0:17:25.35:213,25,0	0/1:15,0:15:0.86:192,0,1	0/1:14,0:14:91.94:92,0,98	0/0:32,0:31:14.41:0,14,126	1/1:25,0:25:50.47:386,50,0	1/1:16,0:15:28.19:347,28,0	0/1:19,0:18:1.77:324,0,2	1/1:4,0:3:5.92:41,6,0
chr10	81214515	.	GTGTA	G	4717.59	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=4.267;DP=449;FS=19.713;HRun=0;HaplotypeScore=91.4439;InbreedingCoeff=0.7299;MQ=68.81;MQ0=12;MQRankSum=-2.363;QD=12.78;ReadPosRankSum=3.555;VQSLOD=2.9684;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:22:47.89:375,48,0	0/0:6,0:6:12:0,12,132	0/0:26,0:19:57.02:0,57,567	0/0:35,0:27:67.23:0,67,692	1/1:8,0:7:11.72:95,12,0	1/1:23,0:23:59.76:485,60,0	0/0:13,0:13:32.85:0,33,310	1/1:17,0:17:50.78:395,51,0	1/1:16,0:15:1.82:5,2,0	1/1:9,0:9:26.85:218,27,0	1/1:9,0:9:2.99:24,3,0	1/1:5,11:16:3.01:57,3,0	1/1:13,0:13:24.92:232,25,0	1/1:21,0:21:3.01:57,3,0	1/1:18,0:18:9.01:98,9,0	1/1:13,0:13:33:306,33,0	1/1:14,0:14:29.76:219,30,0	1/1:5,0:4:11.78:77,12,0	1/1:9,0:9:23.99:223,24,0	1/1:20,0:19:3.01:37,3,0	1/1:15,0:14:26.93:217,27,0	1/1:12,0:12:20.93:165,21,0	1/1:14,0:14:20.99:223,21,0	1/1:8,25:32:9.03:170,9,0	1/1:24,0:24:50.67:398,51,0	1/1:16,0:15:37.96:301,38,0	1/1:17,0:16:23.38:300,23,0	1/1:3,0:2:5.92:41,6,0
chr10	81214517	.	GTA	G	4389.41	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=4.374;DP=439;FS=14.857;HRun=0;HaplotypeScore=80.2155;InbreedingCoeff=0.7336;MQ=72.22;MQ0=12;MQRankSum=-2.838;QD=12.83;ReadPosRankSum=3.651;VQSLOD=3.2275;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:21:47.41:375,47,0	0/0:6,0:6:11.99:0,12,106	0/0:28,0:21:63.03:0,63,622	0/0:36,0:28:70.13:0,70,707	1/1:8,0:7:11.54:95,12,0	1/1:23,0:23:59.37:449,59,0	0/0:14,0:14:14.61:0,15,268	1/1:1,16:17:50.78:395,51,0	0/0:13,0:12:0.47:0,0,1	1/1:9,0:9:26.85:218,27,0	1/1:9,0:9:2.99:24,3,0	1/1:11,0:11:3:25,3,0	1/1:12,0:12:29.89:232,30,0	1/1:3,16:19:3:25,3,0	1/1:18,0:18:8.97:70,9,0	1/1:13,0:13:32.77:263,33,0	1/1:14,0:14:29.76:219,30,0	1/1:5,0:4:11.78:77,12,0	1/1:9,0:9:23.95:195,24,0	1/1:20,0:19:2.99:23,3,0	1/1:16,0:15:32.91:266,33,0	1/1:11,0:11:20.95:169,21,0	1/1:12,0:12:23.95:193,24,0	1/1:33,0:32:8.99:75,9,0	1/1:24,0:24:50.67:398,51,0	1/1:16,0:15:32.24:264,32,0	1/1:17,0:16:28.84:297,29,0	1/1:3,0:2:5.92:41,6,0
chr10	81214831	.	A	ATTT	16481.68	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-0.789;DP=523;FS=0.000;HRun=10;HaplotypeScore=95.4656;InbreedingCoeff=0.9331;MQ=74.20;MQ0=1;MQRankSum=-5.530;QD=34.92;ReadPosRankSum=2.321;VQSLOD=4.4677;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:15:29.91:246,30,0	0/0:7,0:7:15.02:0,15,182	0/0:14,0:16:30.32:0,30,322	0/0:10,0:10:3.62:0,4,102	1/1:2,16:20:54.14:906,54,0	1/1:2,18:22:51.15:945,51,0	0/0:17,0:18:38.96:0,39,443	1/1:10,19:31:66.20:1183,66,0	1/1:3,17:21:48.16:904,48,0	1/1:4,19:25:60.12:998,60,0	1/1:1,19:22:54.14:890,54,0	1/1:6,9:17:24.06:427,24,0	1/1:5,1:32:64.03:518,64,0	1/1:2,0:21:49.08:386,49,0	1/1:4,10:15:30.10:540,30,0	1/1:3,25:30:65.94:1218,66,0	1/1:3,12:18:33.11:605,33,0	1/1:0,4:4:12.04:231,12,0	1/1:5,10:17:33.11:590,33,0	1/1:7,23:32:72.18:1284,72,0	1/1:4,13:19:24.08:442,24,0	1/1:3,9:15:27.07:484,27,0	1/1:0,15:19:42.12:758,42,0	1/1:1,8:9:21.07:404,21,0	1/1:2,13:16:27.09:504,27,0	1/1:2,10:13:27.04:435,27,0	1/1:4,26:31:72.25:1330,72,0	1/1:1,4:6:15.03:255,15,0
chr10	81217500	.	ATTTG	A	3514.37	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.427;DP=562;FS=3.520;HRun=0;HaplotypeScore=124.4584;InbreedingCoeff=0.9951;MQ=68.82;MQ0=1;MQRankSum=-0.823;QD=39.05;ReadPosRankSum=1.587;VQSLOD=3.9574;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:75.05:0,75,1545	0/0:12,0:12:36.12:0,36,884	0/0:23,0:22:38.91:0,39,709	0/0:13,0:12:21.07:0,21,504	0/0:24,0:24:60:0,60,1285	1/1:3,8:11:27.04:435,27,0	0/0:15,0:15:39.08:0,39,838	0/0:28,0:28:66.18:0,66,1383	1/1:4,15:19:45.03:736,45,0	0/0:29,0:29:75.17:0,75,1593	0/0:24,0:24:71.05:0,71,1587	1/1:4,8:12:27.09:479,27,0	0/0:17,0:17:47.42:0,47,953	0/0:27,0:27:69.08:0,69,1550	0/0:18,0:18:48.15:0,48,1148	0/0:22,0:22:63.01:0,63,1357	0/0:28,0:28:75.13:0,75,1671	0/0:13,0:13:30.10:0,30,720	0/0:22,0:22:57.13:0,57,1289	0/0:16,0:16:33.10:0,33,790	0/0:12,0:12:33.06:0,33,684	1/1:6,7:13:29.94:433,30,0	1/1:8,8:16:38.90:578,39,0	1/1:2,17:19:51.13:853,51,0	0/0:27,0:27:75.17:0,75,1741	0/0:25,0:25:62.71:0,63,1342	0/0:29,0:27:80.78:0,81,1731	0/0:12,0:12:15.01:0,15,326
chr10	81217546	.	A	ACC	5394.96	PASS	AB=0.970;AC=49;AF=0.875;AN=56;BaseQRankSum=8.122;DP=437;FS=15.324;HRun=9;HaplotypeScore=131.8581;InbreedingCoeff=0.7562;MQ=83.27;MQ0=0;MQRankSum=-9.133;QD=13.59;ReadPosRankSum=4.839;VQSLOD=1.5797;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:47.38:359,47,0	0/0:9,0:9:18.01:0,18,191	0/1:31,0:32:4.57:5,0,463	0/0:14,0:14:22.66:0,23,244	1/1:19,0:19:32.66:251,33,0	1/1:7,10:19:32.55:444,33,0	0/0:16,0:17:41.83:0,42,427	1/1:15,0:15:8.99:73,9,0	1/1:5,10:16:21.07:323,21,0	1/1:17,0:17:23.94:191,24,0	1/1:20,0:20:32.90:260,33,0	1/1:4,5:9:10.85:143,11,0	1/1:11,0:11:20.92:162,21,0	1/1:16,0:16:20.96:173,21,0	1/1:12,0:12:17.94:140,18,0	1/1:16,0:16:29.90:235,30,0	1/1:17,0:17:26.67:200,27,0	1/1:12,0:12:17.94:142,18,0	1/1:11,0:11:14.90:111,15,0	1/1:8,0:8:8.98:72,9,0	1/1:7,0:7:2.99:24,3,0	1/1:3,9:14:27.05:388,27,0	1/1:5,9:14:25.78:351,26,0	1/1:8,9:18:32.58:442,33,0	1/1:17,0:17:23.93:190,24,0	1/1:17,0:17:33.37:262,33,0	1/1:25,0:23:50.87:410,51,0	1/1:4,0:4:5.95:44,6,0
chr10	81217553	.	C	CCCTCCCCCG	25985.90	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=-9.229;DP=527;FS=3.706;HRun=0;HaplotypeScore=165.4879;InbreedingCoeff=0.8625;MQ=79.57;MQ0=0;MQRankSum=-11.717;QD=68.56;ReadPosRankSum=2.229;VQSLOD=5.0423;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,16:41:63.21:2933,63,0	0/0:8,0:8:24.08:0,24,601	0/0:33,0:32:58.55:0,59,1445	0/0:14,0:14:34.91:0,35,760	1/1:5,11:24:36.03:1548,36,0	0/0:23,0:23:47.06:0,47,545	0/0:19,0:19:48.15:0,48,1280	1/1:9,1:17:29.76:744,30,0	0/0:16,0:16:26.71:0,27,297	1/1:7,7:18:48.11:1840,48,0	1/1:9,10:27:42.05:1772,42,0	0/1:10,0:10:4.91:5,0,123	1/1:4,7:16:30.10:1340,30,0	1/1:7,7:20:39.13:1492,39,0	1/1:6,6:20:33.11:1268,33,0	1/1:4,11:23:42.14:1752,42,0	1/1:4,7:17:30.10:1361,30,0	1/1:4,7:13:30.10:1296,30,0	1/1:3,3:15:45.04:1069,45,0	1/1:4,3:13:21:793,21,0	1/1:2,1:7:3.01:140,3,0	0/0:17,0:17:32.74:0,33,349	0/0:18,0:18:21.26:0,21,279	0/1:17,0:17:0.10:0,0,375	1/1:5,8:21:33.11:1470,33,0	1/1:5,10:22:51.51:2058,52,0	1/1:3,17:32:60.14:2766,60,0	1/1:1,1:4:9.03:340,9,0
chr10	81218579	.	A	AT	12686.30	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-15.694;DP=694;FS=9.107;HRun=4;HaplotypeScore=61.6981;InbreedingCoeff=0.9996;MQ=87.65;MQ0=0;MQRankSum=-2.004;QD=33.38;ReadPosRankSum=0.228;VQSLOD=5.0500;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.22:0,84,940	0/0:14,0:14:39.11:0,39,442	0/0:25,0:25:56.07:0,56,594	0/0:25,0:25:62.72:0,63,631	1/1:3,36:39:99:1403,105,0	0/0:29,0:29:81.21:0,81,907	0/0:19,0:19:54.13:0,54,588	1/1:1,33:34:99:1260,99,0	0/0:22,0:22:63.16:0,63,704	1/1:1,22:23:66.20:872,66,0	1/1:2,20:22:51.17:692,51,0	0/0:24,0:24:72.14:0,72,771	0/0:39,0:39:99:0,117,1315	0/0:17,0:17:51.14:0,51,570	1/1:0,23:23:57.19:779,57,0	1/1:5,21:26:48.16:656,48,0	1/1:3,32:35:81.27:1101,81,0	1/1:1,9:10:24.08:328,24,0	1/1:1,24:25:72.22:954,72,0	1/1:1,28:29:78.17:1010,78,0	1/1:3,19:22:48.16:656,48,0	0/0:22,0:22:54.15:0,54,612	0/0:17,0:17:48.12:0,48,533	0/0:29,0:29:81.20:0,81,897	1/1:3,22:25:54.18:729,54,0	1/1:2,26:28:75.20:974,75,0	1/1:0,26:26:63.21:861,63,0	1/1:0,13:13:30.10:410,30,0
chr10	81219014	.	C	CGGTG	6025.96	PASS	AB=0.909;AC=17;AF=0.304;AN=56;BaseQRankSum=16.467;DP=627;FS=4.253;HRun=0;HaplotypeScore=170.6896;InbreedingCoeff=0.9098;MQ=87.13;MQ0=0;MQRankSum=-16.678;QD=36.97;ReadPosRankSum=3.535;VQSLOD=5.0704;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,8:26:54.16:841,54,0	0/0:15,0:15:45.14:0,45,874	0/0:26,0:26:72.24:0,72,1383	0/0:22,0:22:51.03:0,51,855	0/0:31,0:31:90.29:0,90,1800	1/1:4,7:16:44.75:658,45,0	0/0:22,0:22:63.20:0,63,1237	0/0:29,0:29:81.23:0,81,1439	1/1:1,10:15:20.20:727,20,0	0/0:31,0:31:93.15:0,93,1872	0/0:30,0:30:87.30:0,87,1808	1/1:4,9:19:24.18:799,24,0	1/1:4,12:29:54.11:1159,54,0	1/1:2,9:21:54.91:809,55,0	0/0:42,0:42:99:0,126,2590	0/0:29,0:29:84.29:0,84,1762	0/0:21,0:21:60.21:0,60,1243	0/0:12,0:12:36.10:0,36,697	0/0:23,0:23:69.24:0,69,1417	0/0:26,0:26:78.24:0,78,1558	0/0:30,0:30:90.30:0,90,1833	1/1:5,5:16:21.73:468,22,0	1/1:1,6:11:27.09:460,27,0	0/1:5,1:10:11.91:105,0,12	0/0:24,0:24:72.25:0,72,1510	0/0:25,0:25:72.25:0,72,1495	0/0:23,0:23:69.24:0,69,1429	0/0:3,0:3:9.03:0,9,189
chr10	81219015	.	A	AAAGATTTGCAGCGCGACT	41386.37	PASS	AB=0.929;AC=17;AF=0.304;AN=56;BaseQRankSum=17.151;DP=721;FS=7.978;HRun=0;HaplotypeScore=372.7472;InbreedingCoeff=0.9080;MQ=81.43;MQ0=0;MQRankSum=-19.608;QD=162.30;ReadPosRankSum=4.572;VQSLOD=4.0808;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,8:35:46.76:4577,47,0	0/0:15,0:15:45.13:0,45,1905	0/0:26,0:26:69.21:0,69,2875	0/0:21,0:21:48.61:0,49,1678	0/0:31,0:31:90.30:0,90,4260	1/1:25,7:32:33.25:4847,33,0	0/0:22,0:22:66.21:0,66,2874	0/0:27,0:27:78.23:0,78,3056	1/1:17,10:27:71.73:5061,72,0	0/0:31,0:31:93.31:0,93,4573	0/0:31,0:31:87.30:0,87,4426	1/1:18,9:28:70.41:5450,70,0	1/1:27,12:39:99:6159,101,0	1/1:23,9:32:33.54:5554,34,0	0/0:42,0:42:99:0,123,6483	0/0:29,0:29:87.28:0,87,4421	0/0:21,0:21:63.20:0,63,3160	0/0:12,0:12:36.11:0,36,1591	0/0:23,0:23:69.24:0,69,3401	0/0:27,0:27:78.24:0,78,3699	0/0:31,0:31:90.30:0,90,4307	1/1:26,5:31:45.87:5205,46,0	1/1:12,6:18:48.15:3284,48,0	0/1:12,1:13:17.26:1250,0,17	0/0:24,0:24:72.25:0,72,3829	0/0:27,0:27:75.25:0,75,3692	0/0:23,0:23:69.24:0,69,3495	0/0:3,0:3:9.03:0,9,482
chr10	81219335	.	A	ATT	3121.06	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=11.169;DP=609;FS=3.451;HRun=8;HaplotypeScore=78.3143;InbreedingCoeff=0.8223;MQ=79.82;MQ0=0;MQRankSum=-1.234;QD=28.63;ReadPosRankSum=2.691;VQSLOD=3.7879;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,33:37:90.24:1399,90,0	0/0:4,0:4:9.02:0,9,100	0/1:18,0:19:15.18:15,0,235	0/0:22,0:19:31.27:0,31,312	0/0:24,0:24:72.18:0,72,793	0/0:18,0:18:51.03:0,51,542	0/0:23,0:23:60.13:0,60,659	0/0:30,0:30:78.08:0,78,806	0/0:28,0:28:75.17:0,75,826	0/0:21,0:21:48.10:0,48,528	0/0:19,0:19:50.67:0,51,567	0/0:20,0:20:51.09:0,51,550	1/1:2,25:27:60.16:924,60,0	1/1:2,22:26:60.20:931,60,0	0/0:34,0:34:90.22:0,90,994	0/0:24,0:24:69.19:0,69,769	0/0:30,0:30:87.21:0,87,961	0/0:14,0:16:26.95:0,27,418	0/0:18,0:19:50.86:0,51,533	0/0:27,0:27:75.17:0,75,825	0/0:18,0:18:51.14:0,51,568	0/0:24,0:25:62.88:0,63,671	0/0:13,0:13:27.05:0,27,301	0/0:18,0:18:54.15:0,54,602	0/0:23,0:23:57.05:0,57,595	0/0:14,0:14:39.10:0,39,435	0/0:23,0:22:66.14:0,66,716	0/0:7,0:7:18.05:0,18,201
chr10	81219436	.	GA	G	5561.79	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.207;DP=601;FS=2.420;HRun=7;HaplotypeScore=60.4102;InbreedingCoeff=0.9908;MQ=81.80;MQ0=0;MQRankSum=-0.284;QD=26.74;ReadPosRankSum=5.092;VQSLOD=5.3174;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:60.14:612,60,0	0/0:11,0:11:33.11:0,33,415	0/0:19,0:18:33.10:0,33,405	0/0:16,0:16:32.96:0,33,367	0/0:24,0:24:72.23:0,72,906	1/1:0,22:22:63.14:642,63,0	0/0:18,0:18:48.15:0,48,604	0/0:28,0:28:47.79:0,48,902	1/1:0,21:21:54.12:551,54,0	0/0:18,0:18:48.15:0,48,604	0/0:32,0:32:81.23:0,81,991	1/1:0,19:19:57.13:581,57,0	1/1:2,24:26:69.16:704,69,0	1/1:2,19:21:57.11:574,57,0	0/0:31,0:31:90.28:0,90,1121	0/0:16,0:16:42.12:0,42,515	0/0:30,0:30:87.25:0,87,1068	0/0:14,0:14:39.12:0,39,489	0/0:16,0:16:48.14:0,48,592	0/0:30,0:30:87.27:0,87,1081	0/0:16,0:16:45.09:0,45,521	1/1:2,24:26:66.15:673,66,0	1/1:2,23:25:60.13:612,60,0	1/1:2,21:23:60.14:612,60,0	0/0:22,0:22:60.19:0,60,755	0/0:23,0:23:69.22:0,69,868	0/0:23,0:23:66.21:0,66,830	0/0:6,0:6:9.03:0,9,113
chr10	81220310	.	AT	A	9718.35	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-2.702;DP=707;FS=2.874;HRun=8;HaplotypeScore=96.6866;InbreedingCoeff=0.9997;MQ=86.09;MQ0=0;MQRankSum=-3.710;QD=24.98;ReadPosRankSum=1.857;VQSLOD=5.2559;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.19:0,66,786	0/0:17,0:17:45.13:0,45,533	0/0:30,0:30:57.14:0,57,649	0/0:26,0:25:63.11:0,63,706	1/1:2,23:25:68.14:643,68,0	0/0:36,0:35:99:0,102,1217	0/0:21,0:21:57.15:0,57,666	1/1:2,29:31:87.08:822,87,0	0/0:18,0:18:45.14:0,45,543	1/1:0,22:22:60.07:570,60,0	1/1:1,30:31:78.07:743,78,0	0/0:19,0:19:45.13:0,45,534	0/0:37,0:37:99:0,105,1257	0/0:31,0:31:87.24:0,87,1036	1/1:2,27:29:69.11:666,69,0	1/1:2,30:32:87.14:840,87,0	1/1:1,24:25:72.12:695,72,0	1/1:1,16:17:48.08:463,48,0	1/1:5,17:22:50.98:475,51,0	1/1:4,29:33:78.05:742,78,0	1/1:2,17:19:45.07:434,45,0	0/0:19,0:19:51.14:0,51,597	0/0:24,0:24:66.17:0,66,764	0/0:15,0:15:36.10:0,36,423	1/1:3,28:31:78.12:753,78,0	1/1:4,36:40:99:1030,108,0	1/1:1,23:24:63.10:608,63,0	1/1:0,8:8:24.04:231,24,0
chr10	81235749	.	C	CAG	1877.54	PASS	AB=0.967;AC=44;AF=0.815;AN=54;BaseQRankSum=-2.534;DP=640;FS=1.123;HRun=0;HaplotypeScore=103.2985;InbreedingCoeff=0.0316;MQ=73.01;MQ0=4;MQRankSum=1.552;QD=3.23;ReadPosRankSum=0.403;VQSLOD=2.3686;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:6.01:61,6,0	0/1:10,0:10:17.87:18,0,26	0/1:18,0:16:0:0,0,0	./.	1/1:25,0:27:12:118,12,0	0/1:16,5:23:23.22:66,0,23	0/0:16,0:25:15.56:0,16,72	1/1:19,0:19:0.47:1,0,0	1/1:21,0:21:3.01:43,3,0	1/1:27,0:27:14.14:121,14,0	1/1:20,0:20:5.99:48,6,0	0/1:24,0:23:25.45:25,0,55	1/1:34,0:34:11.97:103,12,0	0/1:28,1:29:10.91:150,0,11	1/1:22,0:22:8.98:72,9,0	1/1:27,0:27:13.58:132,14,0	1/1:20,0:20:10.01:76,10,0	1/1:11,0:10:8.99:90,9,0	1/1:29,0:29:15.87:131,16,0	1/1:29,0:29:17.99:173,18,0	1/1:18,0:17:2.98:23,3,0	0/1:25,0:25:3.57:54,0,4	0/1:18,0:18:31.79:75,0,32	0/1:27,0:27:5.09:59,0,5	1/1:14,0:14:2.99:23,3,0	1/1:23,0:23:17.99:207,18,0	1/1:24,0:24:13.73:121,14,0	1/1:10,0:10:2.99:24,3,0
chr10	81235751	.	G	GAGAA	6886.80	PASS	AB=0.993;AC=43;AF=0.768;AN=56;BaseQRankSum=-3.697;DP=692;FS=0.000;HRun=0;HaplotypeScore=113.3585;InbreedingCoeff=0.3387;MQ=70.15;MQ0=4;MQRankSum=2.036;QD=11.27;ReadPosRankSum=0.601;VQSLOD=3.9293;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:6.48:106,6,0	0/0:9,0:9:15.45:0,15,154	0/0:16,0:14:15.52:0,16,227	0/0:33,0:20:47.12:0,47,448	1/1:28,0:28:38.54:407,39,0	0/1:27,0:27:5.90:213,0,6	0/0:23,0:23:23.35:0,23,365	1/1:24,0:24:48.57:482,49,0	1/1:26,0:26:2.96:19,3,0	0/1:27,1:28:20.87:495,0,21	1/1:22,0:22:5.89:257,6,0	0/1:26,0:25:10.01:10,0,65	1/1:6,28:36:15.47:289,15,0	1/1:5,23:30:3.98:365,4,0	1/1:3,21:26:9.50:236,10,0	1/1:25,1:26:0.17:283,0,0	1/1:19,1:20:40.04:477,40,0	1/1:5,7:11:11.95:202,12,0	1/1:8,24:34:77.42:952,77,0	1/1:8,23:31:59.88:598,60,0	1/1:4,15:22:3.01:81,3,0	1/1:26,0:26:38.01:267,38,0	0/1:22,0:22:32.40:115,0,32	0/1:28,0:28:11.51:75,0,12	1/1:3,13:19:3.01:81,3,0	1/1:24,0:24:62.86:624,63,0	1/1:24,1:25:14.59:173,15,0	1/1:1,10:12:3.01:80,3,0
chr10	81235753	.	G	GAA	5791.71	PASS	AB=0.665;AC=38;AF=0.679;AN=56;BaseQRankSum=-1.265;DP=698;FS=0.000;HRun=1;HaplotypeScore=103.6517;InbreedingCoeff=0.1218;MQ=68.56;MQ0=5;MQRankSum=2.290;QD=9.40;ReadPosRankSum=2.435;VQSLOD=1.5985;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,22:38:33.36:100,0,33	0/0:9,0:9:15.38:0,15,117	0/0:15,0:13:15.25:0,15,227	0/0:33,0:19:47.12:0,47,450	0/1:9,17:28:29.45:299,0,29	1/1:28,1:29:22.29:322,22,0	0/0:25,0:25:42.81:0,43,341	1/1:25,0:25:38.85:443,39,0	1/1:2,23:25:3.01:52,3,0	0/1:11,17:30:56.63:424,0,57	1/1:4,16:23:8.66:187,9,0	0/1:8,19:26:30.51:45,0,31	1/1:33,1:34:1.35:173,1,0	0/1:27,1:28:15.21:209,0,15	1/1:24,0:24:12.02:128,12,0	0/1:9,17:28:42.24:174,0,42	1/1:19,1:20:33.05:336,33,0	1/1:10,1:10:12.01:145,12,0	1/1:31,1:32:70.72:675,71,0	1/1:25,3:28:35.26:517,35,0	1/1:22,0:21:3:37,3,0	1/1:2,22:29:41.86:348,42,0	0/1:4,17:23:14.10:165,0,14	0/1:6,24:30:5.59:112,0,6	0/1:19,0:19:15.67:30,0,16	1/1:4,19:25:62.89:645,63,0	0/1:7,19:27:1.36:190,0,1	1/1:11,0:11:3.01:36,3,0
chr10	81237896	.	T	TGATAGATA	6457.92	PASS	AC=36;AF=0.720;AN=50;BaseQRankSum=-4.674;DP=608;FS=0.976;HRun=0;HaplotypeScore=160.3974;InbreedingCoeff=0.7647;MQ=57.86;MQ0=4;MQRankSum=1.184;QD=14.68;ReadPosRankSum=-1.879;VQSLOD=4.0053;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:25:21.01:250,21,0	1/1:5,0:10:6:71,6,0	./.	./.	1/1:12,0:24:9.03:243,9,0	0/0:8,0:26:10.31:0,10,127	0/0:10,0:10:14.93:0,15,306	1/1:35,0:35:26.99:292,27,0	0/0:7,0:19:13.76:0,14,173	1/1:13,2:16:15.03:357,15,0	1/1:15,0:24:26.94:258,27,0	0/0:10,0:19:15.32:0,15,167	1/1:14,0:31:20.97:193,21,0	1/1:15,0:29:14.97:122,15,0	1/1:17,11:32:6.02:243,6,0	1/1:7,11:20:11.59:485,12,0	1/1:22,0:24:12.04:308,12,0	./.	1/1:12,6:20:27.03:777,27,0	1/1:9,6:21:6.02:243,6,0	1/1:28,1:28:18.01:336,18,0	0/0:3,0:6:3.01:0,3,45	0/0:12,0:22:0:0,0,1	0/0:5,0:15:5.91:0,6,103	1/1:12,0:18:9.03:287,9,0	1/1:16,13:30:33.03:1048,33,0	1/1:23,14:42:21.07:776,21,0	1/1:7,0:8:6.02:169,6,0
chr10	81242045	.	A	AC	21005.90	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-9.801;DP=600;FS=6.537;HRun=0;HaplotypeScore=49.0550;InbreedingCoeff=0.9829;MQ=76.85;MQ0=1;MQRankSum=-5.687;QD=38.47;ReadPosRankSum=5.201;VQSLOD=4.6011;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:42.14:613,42,0	0/0:11,0:11:33.10:0,33,445	0/0:16,0:15:42:0,42,530	0/0:14,0:14:26.08:0,26,304	1/1:1,22:23:57.11:807,57,0	1/1:0,25:25:69.23:1009,69,0	0/0:13,0:13:39.13:0,39,544	1/1:1,30:31:90.25:1238,90,0	1/1:0,15:15:36.12:526,36,0	1/1:0,41:41:99:1666,123,0	1/1:0,24:24:72.16:1026,72,0	1/1:1,30:31:78.26:1140,78,0	1/1:0,19:19:54.18:790,54,0	1/1:0,14:14:27.09:395,27,0	1/1:0,26:26:75.25:1097,75,0	1/1:0,29:29:72.24:1054,72,0	1/1:0,17:17:42.14:614,42,0	1/1:1,10:11:30.10:437,30,0	1/1:0,21:21:62.98:795,63,0	1/1:1,45:46:99:1769,123,0	1/1:0,12:12:30.10:439,30,0	1/1:0,20:20:54.07:762,54,0	1/1:0,22:22:54.18:786,54,0	1/1:0,24:24:63.21:921,63,0	1/1:0,24:24:66.22:965,66,0	1/1:1,27:28:84.26:1191,84,0	1/1:0,22:22:57.19:834,57,0	1/1:0,3:3:9.03:132,9,0
chr10	81242483	.	TC	T	16074.47	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=15.204;DP=715;FS=7.428;HRun=1;HaplotypeScore=130.2911;InbreedingCoeff=0.9952;MQ=81.28;MQ0=0;MQRankSum=-4.076;QD=29.44;ReadPosRankSum=2.801;VQSLOD=4.2343;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.24:0,69,1102	0/0:16,0:16:48.16:0,48,765	0/0:25,0:25:69.17:0,69,1013	0/0:17,0:17:42.11:0,42,582	1/1:0,24:24:72.23:893,72,0	1/1:31,0:31:54.63:414,55,0	0/0:22,0:22:66.20:0,66,1008	1/1:2,28:30:81.24:987,81,0	1/1:33,0:33:16.87:404,17,0	1/1:1,27:28:78.18:924,78,0	1/1:0,24:24:72.23:893,72,0	1/1:27,0:27:72.19:397,72,0	0/0:40,0:40:99:0,120,1856	0/0:26,0:26:78.27:0,78,1245	1/1:1,35:36:99:1265,102,0	1/1:2,36:38:99:1264,102,0	1/1:0,16:16:48.15:594,48,0	1/1:0,5:5:15.05:186,15,0	1/1:31,0:31:92.91:1093,93,0	1/1:0,35:35:99:1302,105,0	1/1:0,27:27:78.25:967,78,0	1/1:18,0:18:48.17:254,48,0	1/1:23,0:23:38.78:322,39,0	1/1:17,0:17:43.35:239,43,0	1/1:0,28:28:81.25:1004,81,0	1/1:1,28:29:84.26:1041,84,0	1/1:0,29:30:84.26:1040,84,0	1/1:1,15:16:48.15:591,48,0
chr10	81242484	.	CG	C	19192.06	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=15.358;DP=710;FS=9.079;HRun=2;HaplotypeScore=117.9377;InbreedingCoeff=0.9971;MQ=81.40;MQ0=0;MQRankSum=-4.169;QD=35.54;ReadPosRankSum=2.194;VQSLOD=3.9444;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.23:0,72,1058	0/0:16,0:16:48.15:0,48,700	0/0:24,0:24:66.22:0,66,980	0/0:17,0:17:45.09:0,45,605	1/1:24,0:24:72.23:893,72,0	1/1:0,30:30:78.25:1012,78,0	0/0:22,0:22:66.21:0,66,965	1/1:29,0:29:81.24:987,81,0	1/1:1,30:31:84.27:1090,84,0	1/1:27,0:27:78.18:924,78,0	1/1:24,0:24:72.23:893,72,0	1/1:0,27:27:75.24:973,75,0	0/0:41,0:41:99:0,114,1707	0/0:26,0:26:78.26:0,78,1169	1/1:36,0:36:99:1265,102,0	1/1:36,0:36:99:1264,102,0	1/1:17,0:17:48.15:594,48,0	1/1:5,0:5:15.05:186,15,0	1/1:0,31:31:93.24:1121,93,0	1/1:36,0:36:99:1302,105,0	1/1:27,0:27:78.25:967,78,0	1/1:0,18:18:51.01:643,51,0	1/1:0,22:22:63.20:818,63,0	1/1:0,17:17:45.15:584,45,0	1/1:28,0:28:81.25:1004,81,0	1/1:28,0:28:84.26:1041,84,0	1/1:31,0:31:84.26:1040,84,0	1/1:16,0:16:48.15:591,48,0
chr10	81243237	.	A	AT	9301.15	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-15.370;DP=575;FS=1.445;HRun=8;HaplotypeScore=50.8428;InbreedingCoeff=0.9955;MQ=82.80;MQ0=0;MQRankSum=-1.654;QD=28.44;ReadPosRankSum=0.367;VQSLOD=5.0915;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.03:0,51,467	0/0:11,0:11:27.01:0,27,247	0/0:16,0:16:32.94:0,33,292	0/0:15,0:15:29.97:0,30,265	1/1:1,32:33:93.15:1029,93,0	0/0:27,0:27:72.02:0,72,655	0/0:16,0:16:45:0,45,407	1/1:7,33:40:96.21:1071,96,0	0/0:23,0:23:60.02:0,60,549	1/1:4,20:24:60.16:681,60,0	1/1:2,19:21:57.17:657,57,0	0/0:22,0:22:63.03:0,63,577	0/0:22,0:22:59.96:0,60,532	0/0:19,0:19:51.02:0,51,467	1/1:3,23:25:54.16:623,54,0	1/1:1,18:20:50.98:568,51,0	1/1:4,22:26:57.09:640,57,0	1/1:2,12:14:39.10:439,39,0	1/1:1,11:13:35.93:386,36,0	1/1:0,23:23:66.12:733,66,0	1/1:3,13:16:36.11:415,36,0	0/0:18,0:18:51.03:0,51,467	0/0:27,0:27:66.02:0,66,604	0/0:14,0:14:42.02:0,42,384	1/1:3,19:22:51.15:589,51,0	1/1:1,22:23:38.69:675,39,0	1/1:3,19:22:57.17:658,57,0	1/1:0,4:4:12.04:138,12,0
chr10	81246271	.	T	TATTTTGCTTTTTCTGTCAA	70739.60	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-0.409;DP=456;FS=19.443;HRun=0;HaplotypeScore=203.5568;InbreedingCoeff=0.9459;MQ=58.02;MQ0=0;MQRankSum=-10.149;QD=171.70;ReadPosRankSum=2.612;VQSLOD=3.6979;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,1:17:30.06:1572,30,0	0/0:8,0:8:24.08:0,24,1081	0/0:11,0:11:30.10:0,30,1236	0/0:9,0:9:24.03:0,24,919	1/1:20,4:27:66.18:3765,66,0	1/1:7,10:17:48.16:4066,48,0	0/0:16,0:16:48.15:0,48,2227	1/1:41,0:41:99:6683,114,0	1/1:11,3:14:33.11:2920,33,0	1/1:13,5:19:54.16:3720,54,0	1/1:8,11:20:51.13:3930,51,0	1/1:13,8:23:60.21:4531,60,0	1/1:17,4:23:51.10:3153,51,0	1/1:8,2:17:24.08:1527,24,0	1/1:9,4:16:36.12:2789,36,0	1/1:7,9:16:42.14:3670,42,0	1/1:10,0:10:23.96:1030,24,0	1/1:5,1:8:18.06:1448,18,0	1/1:10,1:14:30.08:1560,30,0	1/1:20,5:27:72.16:4698,72,0	1/1:8,1:13:21.03:1440,21,0	1/1:9,5:14:39.13:2714,39,0	1/1:7,8:16:42.14:3315,42,0	1/1:7,0:7:21.07:1556,21,0	1/1:9,14:23:69.24:5873,69,0	1/1:13,1:14:36.12:2362,36,0	1/1:6,6:12:30.10:2343,30,0	1/1:1,0:1:3.01:75,3,0
chr10	81247757	.	A	AT	5957.76	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-12.398;DP=578;FS=0.345;HRun=5;HaplotypeScore=51.4610;InbreedingCoeff=0.9835;MQ=78.62;MQ0=0;MQRankSum=-2.205;QD=34.24;ReadPosRankSum=0.915;VQSLOD=4.9663;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:21.07:276,21,0	0/0:14,0:14:39.07:0,39,409	0/0:16,1:17:12.63:0,13,412	0/0:11,0:11:20.81:0,21,207	0/0:36,0:36:99:0,102,1078	1/1:2,17:19:48.16:632,48,0	0/0:15,0:15:42.11:0,42,451	0/0:34,0:34:90.22:0,90,961	1/1:4,21:25:54.18:711,54,0	0/0:25,0:25:66.16:0,66,710	0/0:34,0:34:96.23:0,96,1023	1/1:3,16:19:45.15:592,45,0	1/1:2,29:31:81.26:1064,81,0	1/1:0,24:24:72.23:947,72,0	0/0:21,0:21:63.14:0,63,669	0/0:23,0:23:66.17:0,66,709	0/0:17,0:17:48.09:0,48,505	0/0:9,0:9:24.03:0,24,247	0/0:20,0:19:57.14:0,57,613	0/0:27,0:27:75.18:0,75,806	0/0:13,0:13:39.10:0,39,419	1/1:1,10:11:24.08:316,24,0	1/1:1,30:31:90.29:1183,90,0	1/1:0,7:7:18.06:237,18,0	0/0:20,0:20:57.14:0,57,613	0/0:23,0:23:66.16:0,66,709	0/0:39,0:37:99:0,108,1148	0/0:6,0:6:9.02:0,9,97
chr10	81248425	.	G	GAA	15550.39	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-1.678;DP=652;FS=0.000;HRun=8;HaplotypeScore=90.1431;InbreedingCoeff=0.9802;MQ=75.41;MQ0=0;MQRankSum=-4.685;QD=26.27;ReadPosRankSum=4.321;VQSLOD=4.4355;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:29:69.87:240,70,0	0/0:10,0:10:30.04:0,30,314	0/0:16,0:16:14.68:0,15,226	0/0:15,0:14:25.60:0,26,263	1/1:5,24:29:72.16:1069,72,0	1/1:2,0:31:69.87:240,70,0	0/0:19,0:19:48.10:0,48,524	1/1:8,19:27:56.13:869,56,0	1/1:1,0:11:24.95:86,25,0	1/1:5,27:33:83.74:1261,84,0	1/1:8,21:30:69.14:1017,69,0	1/1:4,0:25:39.93:137,40,0	1/1:5,0:29:54.80:188,55,0	1/1:2,0:16:34.93:120,35,0	1/1:1,17:19:41.62:609,42,0	1/1:2,20:22:57.19:905,57,0	1/1:6,22:31:68.72:1056,69,0	1/1:1,16:18:38.62:573,39,0	1/1:1,21:23:66.22:1027,66,0	1/1:6,18:25:56.56:783,57,0	1/1:2,13:15:36.12:571,36,0	1/1:1,0:28:64.88:223,65,0	1/1:3,1:23:51.98:215,52,0	1/1:4,0:8:9.98:34,10,0	1/1:2,35:38:90.30:1411,90,0	1/1:9,24:35:81.21:1192,81,0	1/1:4,33:38:87.30:1381,87,0	1/1:0,7:8:23.57:342,24,0
chr10	81252982	.	T	TTA	4488.03	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.967;DP=726;FS=15.120;HRun=0;HaplotypeScore=89.1340;InbreedingCoeff=0.9969;MQ=77.20;MQ0=0;MQRankSum=-2.104;QD=47.24;ReadPosRankSum=4.270;VQSLOD=4.6211;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:34:81.28:1538,81,0	0/0:10,0:10:30.09:0,30,438	0/0:26,0:26:69.19:0,69,955	0/0:24,0:24:63.11:0,63,884	0/0:28,0:28:84.27:0,84,1255	0/0:29,0:29:84.27:0,84,1261	0/0:14,0:14:36.11:0,36,530	0/0:37,0:37:99:0,102,1438	0/0:35,0:35:96.31:0,96,1448	0/0:30,0:30:84.21:0,84,1234	0/0:25,0:25:72.20:0,72,1037	0/0:33,0:33:96.24:0,96,1379	1/1:2,35:37:93.32:1793,93,0	1/1:0,24:24:60.21:1157,60,0	0/0:40,0:40:99:0,120,1726	0/0:28,0:28:81.26:0,81,1218	0/0:30,0:30:90.25:0,90,1311	0/0:15,0:15:39.12:0,39,572	0/0:20,0:20:57.15:0,57,793	0/0:32,0:32:87.28:0,87,1310	0/0:36,0:36:99:0,99,1406	0/0:20,0:20:57.18:0,57,849	0/0:22,0:22:63.21:0,63,964	0/0:19,0:19:57.18:0,57,846	0/0:21,0:21:63.19:0,63,937	0/0:23,0:23:69.22:0,69,1020	0/0:28,0:28:84.21:0,84,1178	0/0:6,0:6:18.04:0,18,253
chr10	81255024	.	TG	T	4825.57	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=13.953;DP=803;FS=0.757;HRun=1;HaplotypeScore=80.8029;InbreedingCoeff=0.9995;MQ=83.11;MQ0=0;MQRankSum=-1.567;QD=39.23;ReadPosRankSum=4.336;VQSLOD=5.3900;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,59:59:99:2308,166,0	0/0:15,0:15:45.14:0,45,693	0/0:22,0:22:66.19:0,66,1011	0/0:32,0:32:93.30:0,93,1412	0/0:28,0:28:81.28:0,81,1295	0/0:23,0:23:66.23:0,66,1055	0/0:26,0:26:75.26:0,75,1197	0/0:30,0:30:90.28:0,90,1377	0/0:25,0:25:75.23:0,75,1147	0/0:28,0:28:84.28:0,84,1325	0/0:11,0:11:33.11:0,33,524	0/0:32,0:32:90.29:0,90,1412	1/1:0,29:29:81.27:1133,81,0	1/1:0,35:35:99:1385,99,0	0/0:46,0:46:99:0,138,2206	0/0:32,0:32:96.33:0,96,1535	0/0:29,0:29:87.30:0,87,1382	0/0:31,0:31:87.29:0,87,1373	0/0:15,0:15:45.14:0,45,691	0/0:24,0:24:72.20:0,72,1078	0/0:60,0:61:99:0,175,2775	0/0:29,0:29:87.30:0,87,1388	0/0:21,0:21:63.21:0,63,1000	0/0:33,0:33:99:0,99,1580	0/0:29,0:29:87.30:0,87,1391	0/0:27,0:27:81.28:0,81,1294	0/0:22,0:22:66.22:0,66,1048	0/0:9,0:9:27.09:0,27,432
chr10	81255564	.	TG	T	2289.40	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.178;DP=651;FS=3.071;HRun=1;HaplotypeScore=69.4979;InbreedingCoeff=0.9400;MQ=71.35;MQ0=0;MQRankSum=-0.738;QD=38.16;ReadPosRankSum=1.280;VQSLOD=4.3462;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:63.21:881,63,0	0/0:8,0:8:24.08:0,24,384	0/0:24,0:24:68.74:0,69,1078	0/0:22,0:22:60.20:0,60,959	0/0:33,0:33:96.31:0,96,1510	0/0:22,0:22:66.23:0,66,1055	0/0:20,0:20:60.20:0,60,959	0/0:35,0:35:99:0,102,1583	0/0:24,0:24:69.24:0,69,1101	0/0:36,0:36:99:0,105,1676	0/0:31,0:31:93.30:0,93,1464	0/0:20,0:20:60.18:0,60,910	1/1:0,23:23:66.22:923,66,0	1/1:1,15:16:45.15:628,45,0	0/0:37,0:37:99:0,111,1773	0/0:15,0:15:45.14:0,45,697	0/0:19,0:19:54.17:0,54,833	0/0:24,0:24:69.13:0,69,1071	0/0:18,0:18:54.18:0,54,864	0/0:22,0:22:66.21:0,66,1031	0/0:22,0:22:66.23:0,66,1055	0/0:26,0:26:78.23:0,78,1196	0/0:27,0:27:81.28:0,81,1295	0/0:26,0:26:78.27:0,78,1244	0/0:31,0:31:93.30:0,93,1459	0/0:17,0:17:48.15:0,48,746	0/0:31,0:31:93.28:0,93,1439	0/0:1,0:1:3.01:0,3,48
chr10	81255874	.	C	CAGTTGCCACTGATGGATCT	10936.25	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=5.981;DP=583;FS=9.283;HRun=0;HaplotypeScore=298.6966;InbreedingCoeff=0.8318;MQ=88.48;MQ0=0;MQRankSum=-11.553;QD=120.18;ReadPosRankSum=0.245;VQSLOD=3.3376;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,2:10:18.02:1400,18,0	0/0:9,0:9:27.07:0,27,1193	0/0:25,0:25:66.01:0,66,2852	0/0:19,0:19:54.15:0,54,2076	0/0:39,0:39:99:0,114,5425	0/0:37,0:36:96.32:0,96,4700	0/0:20,0:20:57.18:0,57,2830	0/0:23,0:23:66.23:0,66,3039	0/0:14,0:14:39.13:0,39,2115	0/0:30,0:30:87.29:0,87,4039	0/0:25,0:25:75.22:0,75,3508	0/0:10,0:10:27.08:0,27,1052	1/1:18,10:29:78.23:5269,78,0	1/1:14,8:22:66.14:4222,66,0	0/0:21,0:21:60.20:0,60,2923	0/0:21,0:21:63.19:0,63,3064	0/0:35,0:35:99:0,101,5239	0/0:24,0:23:66.20:0,66,3125	0/0:20,0:20:60.19:0,60,2568	0/0:16,0:16:48.16:0,48,2379	0/0:13,0:13:39.13:0,39,2042	0/0:12,0:12:33.10:0,33,1627	0/0:15,0:15:45.15:0,45,2040	0/0:10,0:10:27.09:0,27,1390	0/0:25,0:25:72.24:0,72,3362	0/1:30,0:30:45.46:45,0,4254	0/0:21,0:21:63.21:0,63,3237	0/0:8,0:8:21.03:0,21,998
chr10	81255886	.	AG	A	2978.23	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.778;DP=535;FS=4.945;HRun=1;HaplotypeScore=78.9203;InbreedingCoeff=0.9924;MQ=89.37;MQ0=0;MQRankSum=-0.002;QD=32.73;ReadPosRankSum=2.822;VQSLOD=3.3722;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:27.09:0,27,427	0/0:8,0:8:24.08:0,24,383	0/0:24,0:24:72.19:0,72,1077	0/0:17,0:17:48.15:0,48,742	0/0:37,0:37:99:0,108,1725	1/1:0,31:31:81.27:1132,81,0	0/0:18,0:18:54.18:0,54,863	0/0:23,0:23:69.24:0,69,1101	1/1:0,15:15:36.12:503,36,0	0/0:27,0:27:78.20:0,78,1180	0/0:23,0:23:69.20:0,69,1075	1/1:0,6:6:12.04:168,12,0	0/0:19,0:19:54.18:0,54,858	0/0:14,0:14:42.13:0,42,632	0/0:23,0:23:69.14:0,69,1025	0/0:22,0:22:66.23:0,66,1054	0/0:33,0:33:99:0,99,1531	0/0:23,0:23:63.15:0,63,943	0/0:19,0:19:57.17:0,57,868	0/0:13,0:13:39.13:0,39,621	0/0:14,0:14:42.14:0,42,671	1/1:0,14:14:39.09:523,39,0	1/1:0,15:15:33.11:462,33,0	1/1:0,10:10:27.09:377,27,0	0/0:24,0:24:72.25:0,72,1150	0/0:25,0:25:75.26:0,75,1199	0/0:21,0:21:63.20:0,63,983	0/0:8,0:8:24.05:0,24,335
chr10	81255897	.	C	CT	1385.75	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.219;DP=522;FS=5.260;HRun=2;HaplotypeScore=78.4393;InbreedingCoeff=0.9750;MQ=89.97;MQ0=0;MQRankSum=-7.432;QD=32.23;ReadPosRankSum=-0.884;VQSLOD=3.0976;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:10:21.07:302,21,0	0/0:7,0:7:21.07:0,21,260	0/0:22,0:22:60.17:0,60,729	0/0:19,0:19:45.11:0,45,530	0/0:36,0:36:96.29:0,96,1177	0/0:28,0:28:69.21:0,69,845	0/0:21,0:21:60.17:0,60,720	0/0:25,0:25:69.19:0,69,825	0/0:13,0:13:33.10:0,33,409	0/0:22,1:23:60.17:0,60,717	0/0:23,0:23:69.21:0,69,846	0/0:5,0:5:12.04:0,12,149	1/1:2,16:18:45.15:646,45,0	1/1:1,14:15:42.10:580,42,0	0/0:25,0:25:72.21:0,72,880	0/0:20,0:20:60.17:0,60,730	0/0:32,0:32:78.24:0,78,964	0/0:22,0:22:54.13:0,54,651	0/0:15,0:15:45.11:0,45,531	0/0:15,0:15:45.14:0,45,558	0/0:16,0:16:48.15:0,48,595	0/0:14,0:14:39.10:0,39,458	0/0:13,0:13:27.04:0,27,334	0/0:11,0:11:33.10:0,33,409	0/0:23,0:23:66.21:0,66,818	0/0:26,0:26:72.21:0,72,868	0/0:20,0:20:60.19:0,60,742	0/0:5,0:5:12.04:0,12,149
chr10	81257764	.	G	GCT	14607.65	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-17.380;DP=660;FS=2.619;HRun=0;HaplotypeScore=74.1660;InbreedingCoeff=0.9972;MQ=85.03;MQ0=0;MQRankSum=-4.627;QD=39.69;ReadPosRankSum=2.068;VQSLOD=6.9864;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,120,1543	0/0:5,0:5:15.05:0,15,193	0/0:29,0:29:57.80:0,58,678	0/0:25,0:26:67.10:0,67,846	1/1:2,18:21:51.17:847,51,0	0/0:25,0:24:63.20:0,63,811	0/0:16,0:16:42.14:0,42,541	1/1:3,21:24:60.17:955,60,0	0/0:25,0:25:69.22:0,69,886	1/1:4,21:29:66.17:996,66,0	1/1:3,15:18:45.15:759,45,0	0/0:13,0:13:33.11:0,33,425	0/0:26,0:26:78.25:0,78,1003	0/0:20,0:20:60.19:0,60,772	1/1:5,22:27:60.21:1012,60,0	1/1:3,27:31:81.28:1366,81,0	1/1:4,25:29:66.23:1114,66,0	1/1:3,13:16:33.11:556,33,0	1/1:5,17:22:51.16:835,51,0	1/1:3,27:31:75.26:1263,75,0	1/1:2,36:40:90.31:1508,90,0	0/0:15,0:15:33.11:0,33,424	0/0:21,0:21:60.18:0,60,758	0/0:24,0:24:63.20:0,63,811	1/1:1,23:24:63.22:1062,63,0	1/1:1,20:23:63.20:1032,63,0	1/1:5,21:26:57.19:950,57,0	1/1:0,7:7:21.07:354,21,0
chr10	81259048	.	CGTGTGTGT	C	2572.77	PASS	AB=0.759;AC=21;AF=0.438;AN=48;BaseQRankSum=2.014;DP=572;FS=0.693;HRun=0;HaplotypeScore=151.0155;InbreedingCoeff=0.7216;MQ=70.50;MQ0=5;MQRankSum=-5.914;QD=13.76;ReadPosRankSum=-1.882;VQSLOD=2.6783;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:31:14.97:0,15,122	0/0:10,0:11:11.99:0,12,182	./.	./.	1/1:11,0:13:6.02:107,6,0	0/0:17,0:20:21.07:0,21,493	0/0:19,0:19:15.52:0,16,441	0/0:30,0:30:3.78:0,4,11	0/0:15,0:17:15.05:0,15,305	./.	1/1:8,6:15:14.88:215,15,0	0/0:22,0:28:30.07:0,30,509	0/0:22,0:29:32.89:0,33,325	0/0:17,0:18:9:0,9,91	1/1:20,2:25:21.52:377,22,0	1/1:20,2:23:23.99:454,24,0	1/1:12,3:15:3.13:122,3,0	./.	1/1:8,0:7:2.94:18,3,0	1/1:9,4:13:6.02:149,6,0	0/0:36,0:37:2.84:0,3,28	0/0:20,0:22:18.06:0,18,340	0/0:12,0:16:21.05:0,21,396	0/0:18,0:28:39.10:0,39,739	0/1:15,6:22:35.59:355,0,36	1/1:15,3:18:6.48:104,6,0	1/1:15,9:26:24.08:554,24,0	1/1:4,5:9:11.18:297,11,0
chr10	81259764	.	C	CTTTT	7115.48	PASS	AB=0.659;AC=42;AF=0.750;AN=56;BaseQRankSum=-6.719;DP=473;FS=3.889;HRun=11;HaplotypeScore=77.7866;InbreedingCoeff=0.6877;MQ=78.46;MQ0=0;MQRankSum=-3.747;QD=18.72;ReadPosRankSum=-3.804;VQSLOD=1.9973;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:32:31.45:271,31,0	0/0:9,0:9:24.02:0,24,307	0/0:9,0:11:17.69:0,18,177	0/0:10,0:12:5.85:0,6,64	1/1:20,0:21:44.45:801,44,0	0/0:9,0:26:21.53:0,22,89	0/0:16,0:17:38.85:0,39,453	1/1:16,15:32:59.57:961,60,0	0/1:10,0:18:41.11:48,0,41	1/1:6,12:20:45.11:803,45,0	1/1:6,0:10:13.86:196,14,0	0/1:8,0:20:46.33:53,0,46	1/1:5,0:17:18.93:143,19,0	1/1:6,0:21:18.27:115,18,0	1/1:8,12:25:20.23:303,20,0	1/1:4,8:12:6.02:139,6,0	1/1:2,9:14:18.06:352,18,0	1/1:3,14:17:18.06:417,18,0	1/1:13,8:24:36.85:634,37,0	1/1:2,4:7:16.82:202,17,0	1/1:1,6:13:11.11:215,11,0	1/1:1,0:8:8.84:55,9,0	1/1:10,0:14:3.16:68,3,0	0/0:4,0:17:16.81:0,17,109	1/1:1,1:5:8.94:125,9,0	1/1:3,8:16:37.90:648,38,0	1/1:10,17:28:21.49:428,21,0	1/1:3,2:5:6.02:139,6,0
chr10	81260546	.	A	AT	1225.62	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.089;DP=571;FS=20.536;HRun=8;HaplotypeScore=68.0351;InbreedingCoeff=0.9586;MQ=88.74;MQ0=0;MQRankSum=-4.660;QD=19.45;ReadPosRankSum=-0.520;VQSLOD=2.0960;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:26:45.13:519,45,0	0/0:7,0:7:17.98:0,18,158	0/0:29,0:29:50.99:0,51,462	0/0:16,0:16:33.35:0,33,286	0/0:31,0:31:71.99:0,72,655	0/0:27,0:27:66.01:0,66,599	0/0:27,0:27:69:0,69,627	0/0:21,0:21:38.99:0,39,353	0/0:28,0:28:71.98:0,72,649	0/0:17,0:17:8.88:0,9,271	0/0:17,0:17:17.47:0,17,332	0/0:12,0:12:25.57:0,26,224	1/1:3,23:26:48.14:554,48,0	1/1:4,7:11:27.06:295,27,0	0/0:23,0:23:60.01:0,60,549	0/0:26,0:26:66.02:0,66,604	0/0:22,0:22:57.02:0,57,521	0/0:7,0:7:12:0,12,110	0/0:18,0:18:54.02:0,54,491	0/0:17,0:17:33:0,33,302	0/0:22,0:22:56.15:0,56,520	0/0:27,0:27:60:0,60,544	0/0:17,0:17:39.01:0,39,357	0/0:18,0:18:48.02:0,48,439	0/0:19,0:19:51.03:0,51,466	0/0:16,0:16:33:0,33,302	0/0:36,0:36:89.99:0,90,813	0/0:8,0:8:18.01:0,18,165
chr10	81262254	.	G	GA	1995.46	PASS	AB=0.958;AC=7;AF=0.125;AN=56;BaseQRankSum=-8.339;DP=621;FS=4.596;HRun=8;HaplotypeScore=68.7938;InbreedingCoeff=0.8491;MQ=72.38;MQ0=0;MQRankSum=0.488;QD=19.37;ReadPosRankSum=1.082;VQSLOD=3.5606;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:45.13:519,45,0	0/0:7,0:7:18:0,18,165	0/1:22,1:18:7.77:8,0,158	0/0:12,0:11:17.20:0,17,144	0/0:29,0:29:75:0,75,679	0/0:29,0:29:84.02:0,84,763	0/0:21,0:21:51:0,51,461	0/0:32,0:32:86.86:0,87,788	0/0:21,0:21:57.03:0,57,522	0/0:26,0:26:66.02:0,66,603	0/0:23,0:23:57:0,57,515	0/0:22,0:22:66.04:0,66,604	1/1:3,24:28:69.18:784,69,0	1/1:2,27:29:72.21:831,72,0	0/0:34,0:33:90.01:0,90,814	0/0:25,0:25:75.04:0,75,686	0/0:14,0:14:42.02:0,42,384	0/0:25,0:25:51.02:0,51,466	0/0:28,0:28:75.02:0,75,682	0/0:14,0:14:39.01:0,39,357	0/0:24,0:24:60.01:0,60,549	0/0:22,0:22:63.03:0,63,576	0/0:18,0:18:45.01:0,45,412	0/0:8,0:8:20.96:0,21,184	0/0:23,0:23:63.03:0,63,577	0/0:27,0:28:80.05:0,80,708	0/0:27,0:26:72.01:0,72,648	0/0:6,0:6:18.01:0,18,164
chr10	81262642	.	GT	G	3233.06	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.167;DP=479;FS=2.519;HRun=3;HaplotypeScore=42.5429;InbreedingCoeff=0.9903;MQ=74.11;MQ0=0;MQRankSum=0.319;QD=34.03;ReadPosRankSum=1.211;VQSLOD=3.7598;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.15:0,45,648	0/0:12,0:12:36.11:0,36,502	0/0:9,0:9:18.06:0,18,248	0/0:8,0:8:21.07:0,21,288	0/0:27,0:27:81.26:0,81,1150	1/1:1,15:16:45.14:558,45,0	0/0:11,0:11:33.11:0,33,475	0/0:28,0:28:81.27:0,81,1167	1/1:0,12:12:36.11:446,36,0	0/0:25,0:25:75.24:0,75,1064	0/0:20,0:20:60.19:0,60,847	1/1:0,17:17:51.16:632,51,0	0/0:17,0:17:48.16:0,48,682	0/0:18,0:18:51.16:0,51,718	0/0:19,0:19:57.19:0,57,821	0/0:13,0:13:39.13:0,39,562	0/0:18,0:18:54.15:0,54,754	0/0:12,0:12:36.10:0,36,499	0/0:13,0:13:39.13:0,39,561	0/0:29,0:29:84.28:0,84,1210	0/0:11,0:11:30.10:0,30,432	1/1:0,17:17:51.16:632,51,0	1/1:1,24:25:72.23:893,72,0	1/1:1,7:8:21.07:260,21,0	0/0:20,0:20:60.20:0,60,864	0/0:27,0:27:81.26:0,81,1150	0/0:26,0:26:78.25:0,78,1104	0/0:4,0:4:12.04:0,12,173
chr10	81264858	.	A	AC	9070.60	PASS	AB=0.871;AC=54;AF=0.964;AN=56;BaseQRankSum=-5.332;DP=266;FS=35.734;HRun=1;HaplotypeScore=34.0120;InbreedingCoeff=-0.0655;MQ=76.41;MQ0=0;MQRankSum=-5.657;QD=34.10;ReadPosRankSum=3.605;VQSLOD=2.5633;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:48.16:718,48,0	1/1:0,3:3:9.03:135,9,0	0/1:8,2:10:41.94:42,0,118	0/1:9,1:10:45.87:46,0,69	1/1:0,5:5:3.01:45,3,0	1/1:0,9:9:24.08:359,24,0	1/1:0,13:13:30.10:449,30,0	1/1:0,9:9:27.09:404,27,0	1/1:0,13:13:36.08:513,36,0	1/1:0,7:7:21.07:312,21,0	1/1:0,8:8:21.07:307,21,0	1/1:0,9:9:24.04:334,24,0	1/1:0,11:11:33.07:466,33,0	1/1:0,10:10:24.08:359,24,0	1/1:0,15:15:42.14:628,42,0	1/1:0,14:14:39.13:584,39,0	1/1:0,9:9:15.05:224,15,0	1/1:0,1:1:3.01:45,3,0	1/1:1,8:9:27.09:398,27,0	1/1:0,4:4:12.04:179,12,0	1/1:0,11:11:27.05:379,27,0	1/1:0,2:2:6.02:90,6,0	1/1:1,9:10:24.08:359,24,0	1/1:1,19:20:24:309,24,0	1/1:0,9:9:27.06:380,27,0	1/1:0,10:10:30.10:449,30,0	1/1:0,13:13:36.08:513,36,0	1/1:0,1:1:3.01:45,3,0
chr10	81267925	.	A	AT	1758.07	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-3.166;DP=471;FS=7.654;HRun=6;HaplotypeScore=53.1291;InbreedingCoeff=0.9705;MQ=53.61;MQ0=0;MQRankSum=2.152;QD=27.47;ReadPosRankSum=0.859;VQSLOD=3.9358;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,114,1152	0/0:8,0:8:21:0,21,204	0/0:6,0:5:15.03:0,15,152	0/0:17,0:17:45.09:0,45,453	0/0:24,0:24:66.14:0,66,672	1/1:3,9:12:24.08:302,24,0	0/0:12,0:12:33.07:0,33,337	0/0:31,0:31:75.17:0,75,765	1/1:1,12:13:30.10:377,30,0	0/0:26,0:26:66.14:0,66,673	0/0:24,0:24:72.15:0,72,727	1/1:0,8:8:21.07:264,21,0	0/0:15,0:15:45.10:0,45,459	0/0:12,0:12:36.07:0,36,359	0/0:12,0:12:36.08:0,36,366	0/0:12,0:12:9.42:0,9,310	0/0:21,0:20:63.14:0,63,642	0/0:16,0:16:48.11:0,48,490	0/0:15,0:15:42.09:0,42,429	0/0:25,0:25:75.17:0,75,764	0/0:9,0:9:24.05:0,24,245	1/1:0,7:7:21.07:264,21,0	1/1:3,17:20:51.13:621,51,0	1/1:1,3:4:9.03:113,9,0	0/0:12,0:12:33.07:0,33,336	0/0:18,0:17:51.12:0,51,520	0/0:31,0:31:90.20:0,90,917	0/0:17,0:17:48.11:0,48,490
chr10	81269347	.	GT	G	3892.23	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=3.621;DP=567;FS=1.299;HRun=2;HaplotypeScore=124.1231;InbreedingCoeff=0.9881;MQ=63.42;MQ0=0;MQRankSum=2.513;QD=36.04;ReadPosRankSum=2.070;VQSLOD=3.2492;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.19:0,60,867	0/0:11,0:11:33.10:0,33,475	0/0:23,0:20:57.14:0,57,795	0/0:24,0:23:55.13:0,55,885	0/0:20,0:20:57.18:0,57,834	1/1:0,36:36:99:1363,105,0	0/0:17,0:17:48.15:0,48,699	0/0:25,0:24:75.25:0,75,1106	1/1:1,12:13:33.11:428,33,0	0/0:24,0:24:72.24:0,72,1072	0/0:20,0:20:60.19:0,60,878	1/1:0,15:15:42.14:545,42,0	0/0:26,0:26:78.24:0,78,1112	0/0:22,0:22:66.20:0,66,966	0/0:23,0:23:69.23:0,69,1034	0/0:12,0:12:36.11:0,36,522	0/0:17,0:17:51.17:0,51,751	0/0:22,0:22:57.19:0,57,854	0/0:17,0:16:45.15:0,45,674	0/0:31,0:31:93.32:0,93,1393	0/0:26,0:26:78.26:0,78,1167	1/1:0,18:18:48.16:622,48,0	1/1:0,13:13:36.12:467,36,0	1/1:0,13:13:36.12:467,36,0	0/0:20,0:20:60.20:0,60,898	0/0:23,0:23:66.21:0,66,968	0/0:30,0:29:90.27:0,90,1290	0/0:3,0:3:9.03:0,9,135
chr10	81271932	.	GGCTAAGTA	G	6088.30	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=10.320;DP=544;FS=10.451;HRun=0;HaplotypeScore=173.9842;InbreedingCoeff=0.9649;MQ=48.25;MQ0=44;MQRankSum=-12.150;QD=62.77;ReadPosRankSum=1.232;VQSLOD=4.3487;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:54.19:0,54,2210	0/0:2,0:2:6.02:0,6,272	./.	./.	0/0:27,0:27:81.26:0,81,3411	1/1:2,17:18:42.14:1229,42,0	0/0:11,0:11:30.10:0,30,1337	0/0:38,0:26:66.18:0,66,2835	1/1:1,20:21:51.18:1490,51,0	0/0:27,0:26:75.25:0,75,3176	0/0:33,0:30:84.29:0,84,3743	1/1:0,14:14:39.07:1071,39,0	0/0:13,0:12:36.12:0,36,1483	0/0:18,0:18:51.18:0,51,2230	0/0:16,0:16:45.15:0,45,2039	0/0:17,0:17:48.16:0,48,2148	0/0:22,0:22:63.19:0,63,2739	0/0:15,0:15:39.11:0,39,1597	0/0:16,0:15:45.15:0,45,1917	0/0:26,0:26:69.24:0,69,3056	0/0:21,0:20:60.21:0,60,2717	1/1:0,13:12:24.08:702,24,0	1/1:0,20:18:48.08:1333,48,0	1/1:1,9:10:8.71:263,9,0	0/0:12,0:12:33.11:0,33,1401	0/0:27,0:26:75.25:0,75,3189	0/0:29,0:29:87.30:0,87,3682	0/0:10,0:10:30.10:0,30,1359
chr10	81273034	.	T	TG	18484.65	PASS	AB=0.960;AC=49;AF=0.875;AN=56;BaseQRankSum=0.315;DP=605;FS=0.000;HRun=0;HaplotypeScore=114.0145;InbreedingCoeff=0.8084;MQ=58.95;MQ0=1;MQRankSum=3.332;QD=32.66;ReadPosRankSum=2.864;VQSLOD=4.3118;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:30:60.55:793,61,0	0/0:7,0:7:21.06:0,21,278	0/0:25,0:12:17.88:0,18,314	0/1:23,1:13:5.25:5,0,259	1/1:2,39:42:99:1496,111,0	1/1:1,23:24:63.20:869,63,0	0/0:7,0:7:8.86:0,9,239	1/1:2,23:23:66.05:811,66,0	1/1:0,20:20:39.13:541,39,0	1/1:1,30:30:87.28:1211,87,0	1/1:0,24:24:66.05:863,66,0	1/1:0,15:15:36.12:502,36,0	1/1:0,22:22:54.18:752,54,0	1/1:0,19:19:54.18:749,54,0	1/1:0,8:8:24.08:334,24,0	1/1:0,15:15:39.13:542,39,0	1/1:2,21:23:51.16:708,51,0	1/1:4,13:16:20.11:414,20,0	1/1:3,16:18:3.89:555,4,0	1/1:1,28:29:83.95:1067,84,0	1/1:1,23:23:51.17:709,51,0	1/1:0,20:20:53.92:677,54,0	1/1:1,21:22:66.18:893,66,0	1/1:0,15:15:36.12:502,36,0	1/1:0,26:26:69.23:962,69,0	1/1:1,32:31:96.16:1220,96,0	1/1:0,32:32:81.20:1124,81,0	1/1:2,5:7:17.13:184,17,0
chr10	81273304	.	CT	C	12299.53	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=9.985;DP=554;FS=7.750;HRun=7;HaplotypeScore=176.4514;InbreedingCoeff=0.9944;MQ=62.02;MQ0=2;MQRankSum=-2.083;QD=24.90;ReadPosRankSum=5.289;VQSLOD=2.8563;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:32.22:498,32,0	0/0:12,0:12:30.09:0,30,366	0/0:21,0:20:41.66:0,42,482	0/0:11,0:11:15.11:0,15,262	1/1:1,24:24:69.15:700,69,0	1/1:4,23:27:69.15:704,69,0	0/0:16,0:16:45.13:0,45,554	1/1:2,24:25:63.12:636,63,0	1/1:3,13:17:41.12:404,41,0	1/1:4,25:28:78.16:788,78,0	1/1:3,20:23:51.03:519,51,0	1/1:3,14:17:42.09:429,42,0	1/1:1,24:25:60.13:612,60,0	1/1:6,12:18:30.06:306,30,0	1/1:1,18:19:53.36:549,53,0	1/1:1,14:15:30.07:306,30,0	1/1:0,16:17:42.98:430,43,0	1/1:0,11:10:27.06:275,27,0	1/1:3,12:13:33.07:336,33,0	1/1:4,35:38:93.19:942,93,0	1/1:3,10:13:30.07:306,30,0	1/1:2,23:25:63.14:641,63,0	1/1:2,21:23:57.13:582,57,0	1/1:0,14:14:30.07:306,30,0	1/1:0,15:15:45.10:459,45,0	1/1:1,21:22:63.14:643,63,0	1/1:3,18:21:56.91:564,57,0	1/1:4,12:16:36.07:367,36,0
chr10	81274138	.	TG	T	9022.96	PASS	AB=0.727;AC=29;AF=0.518;AN=56;BaseQRankSum=18.783;DP=607;FS=1.000;HRun=3;HaplotypeScore=195.4806;InbreedingCoeff=0.9228;MQ=51.90;MQ0=1;MQRankSum=-17.177;QD=26.70;ReadPosRankSum=1.192;VQSLOD=3.9541;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,1877	0/0:12,0:12:36.12:0,36,518	0/0:19,0:16:42.14:0,42,594	0/0:17,0:17:43.32:0,43,613	1/1:4,41:45:99:1158,114,0	0/0:24,0:24:72.21:0,72,981	0/0:8,0:8:21.07:0,21,302	1/1:12,18:27:66.14:750,66,0	0/0:20,1:21:28.49:0,28,810	1/1:6,25:30:75.23:904,75,0	1/1:2,25:27:75.19:818,75,0	0/0:21,0:21:60.20:0,60,860	0/0:17,0:17:51.17:0,51,732	0/0:20,0:20:57.19:0,57,811	1/1:3,16:19:48.12:533,48,0	1/1:2,14:16:42.12:480,42,0	0/1:5,3:8:23.13:100,0,23	1/1:4,7:11:24.05:264,24,0	1/1:6,6:12:21.03:229,21,0	1/1:3,30:33:81.20:896,81,0	1/1:3,7:10:24.01:231,24,0	0/0:18,0:18:54.18:0,54,776	0/0:34,0:34:99:0,102,1460	0/0:12,0:12:36.12:0,36,518	1/1:7,22:29:75.20:851,75,0	1/1:5,26:31:81.25:970,81,0	1/1:11,21:32:63.10:698,63,0	1/1:0,4:4:12.04:141,12,0
chr10	81274140	.	G	GATATACA	22927.26	PASS	AB=0.929;AC=30;AF=0.536;AN=56;BaseQRankSum=15.595;DP=562;FS=0.000;HRun=0;HaplotypeScore=202.8194;InbreedingCoeff=0.8516;MQ=53.23;MQ0=1;MQRankSum=-17.520;QD=73.02;ReadPosRankSum=1.515;VQSLOD=4.9903;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,3584	0/0:12,0:12:36.12:0,36,1007	0/0:18,0:15:42.14:0,42,1151	0/0:18,0:18:48.16:0,48,1147	1/1:41,1:42:99:3035,108,0	0/0:25,0:25:75.21:0,75,1822	0/0:8,0:8:24.04:0,24,607	1/1:18,3:22:66.20:1903,66,0	0/1:21,0:21:19.66:20,0,1500	1/1:26,0:25:75.26:2184,75,0	1/1:27,0:27:78.26:2055,78,0	0/0:20,0:20:60.21:0,60,1634	0/0:17,0:17:51.18:0,51,1422	0/0:20,0:20:60.16:0,60,1562	1/1:16,0:16:48.16:1349,48,0	1/1:15,0:15:45.15:1221,45,0	0/1:5,1:6:60.45:395,0,60	1/1:7,2:10:24.08:749,24,0	1/1:8,0:8:21.05:538,21,0	1/1:30,0:30:81.28:2249,81,0	1/1:7,1:8:24.08:818,24,0	0/0:18,0:18:54.19:0,54,1496	0/0:34,0:34:99:0,102,2785	0/0:12,0:12:36.12:0,36,1006	1/1:26,0:26:78.27:2008,78,0	1/1:28,0:28:84.29:2328,84,0	1/1:22,0:22:63.69:1736,64,0	1/1:4,0:4:12.04:338,12,0
chr10	81274143	.	T	TAC	9072.43	PASS	AB=0.857;AC=29;AF=0.518;AN=56;BaseQRankSum=19.005;DP=557;FS=2.656;HRun=0;HaplotypeScore=197.0955;InbreedingCoeff=0.9217;MQ=54.33;MQ0=1;MQRankSum=-17.668;QD=31.61;ReadPosRankSum=2.202;VQSLOD=5.9765;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,2070	0/0:13,0:13:39.12:0,39,612	0/0:21,0:19:54.18:0,54,835	0/0:19,0:19:54.10:0,54,763	1/1:42,0:42:99:1250,102,0	0/0:23,0:23:66.21:0,66,1051	0/0:8,0:8:24.08:0,24,391	1/1:22,0:19:53.21:542,53,0	0/0:19,0:19:20.52:0,21,844	1/1:26,0:25:72.65:793,73,0	1/1:28,0:28:72.20:931,72,0	0/0:20,0:20:60.20:0,60,979	0/0:17,0:17:51.17:0,51,832	0/0:19,0:19:57.19:0,57,929	1/1:16,0:16:48.14:583,48,0	1/1:14,2:16:45.14:548,45,0	0/1:5,1:6:30.73:102,0,31	1/1:9,0:9:23.80:248,24,0	1/1:6,0:7:18.05:200,18,0	1/1:29,0:29:81.14:972,81,0	1/1:8,0:8:24.04:248,24,0	0/0:18,0:18:54.18:0,54,881	0/0:35,0:35:99:0,102,1636	0/0:13,0:13:39.12:0,39,612	1/1:25,0:25:69.51:861,70,0	1/1:27,1:28:84.18:938,84,0	1/1:21,0:21:63.11:713,63,0	1/1:4,0:4:12.04:143,12,0
chr10	81274145	.	T	TACAG	24470.34	PASS	AB=0.860;AC=30;AF=0.536;AN=56;BaseQRankSum=17.883;DP=608;FS=1.332;HRun=0;HaplotypeScore=188.8919;InbreedingCoeff=0.8515;MQ=51.55;MQ0=1;MQRankSum=-18.198;QD=67.78;ReadPosRankSum=-0.171;VQSLOD=5.4832;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,2497	0/0:13,0:13:39.13:0,39,779	0/0:21,0:19:54.19:0,54,1054	0/0:17,0:17:33.12:0,33,845	1/1:8,40:49:99:3014,117,0	0/0:21,0:21:63.20:0,63,1224	0/0:8,0:8:24.08:0,24,469	1/1:16,18:30:87.30:2293,87,0	0/1:18,1:19:24.05:24,0,1021	1/1:6,24:29:87.30:2353,87,0	1/1:2,25:27:78.27:2052,78,0	0/0:21,0:21:63.21:0,63,1225	0/0:17,0:17:51.18:0,51,1019	0/0:20,0:20:57.20:0,57,1139	1/1:2,16:18:48.16:1280,48,0	1/1:5,14:19:51.18:1378,51,0	0/1:7,3:10:31.88:594,0,32	1/1:3,7:10:24.08:614,24,0	1/1:2,5:8:24.08:621,24,0	1/1:7,27:34:96.30:2454,96,0	1/1:4,7:11:27.09:701,27,0	0/0:18,0:18:51.17:0,51,1019	0/0:35,0:35:99:0,99,1907	0/0:13,0:13:39.13:0,39,779	1/1:4,22:26:72.25:1926,72,0	1/1:7,26:33:96.33:2639,96,0	1/1:10,19:28:84.29:2201,84,0	1/1:0,4:4:12.04:328,12,0
chr10	81274508	.	AG	A	16631.41	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=11.816;DP=560;FS=21.375;HRun=1;HaplotypeScore=112.5259;InbreedingCoeff=0.9814;MQ=95.41;MQ0=0;MQRankSum=-9.539;QD=35.01;ReadPosRankSum=5.886;VQSLOD=2.9752;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:99:1232,99,0	0/0:15,0:15:45.15:0,45,715	0/0:25,0:25:72.24:0,72,1127	0/0:32,0:32:89.43:0,89,1351	1/1:1,28:29:81.25:1003,81,0	1/1:0,14:14:42.13:521,42,0	0/0:13,0:13:39.12:0,39,599	1/1:1,32:33:96.30:1190,96,0	1/1:0,23:23:69.22:855,69,0	1/1:0,14:14:42.12:508,42,0	1/1:0,12:12:30.09:372,30,0	1/1:0,13:13:39.12:483,39,0	1/1:0,20:20:60.19:743,60,0	1/1:0,20:20:57.18:706,57,0	1/1:2,16:18:51.15:620,51,0	1/1:0,18:18:54.17:669,54,0	1/1:0,18:18:51.16:632,51,0	1/1:0,6:6:18.06:223,18,0	1/1:0,11:11:33.10:408,33,0	1/1:0,27:27:63.20:780,63,0	1/1:0,28:27:81.25:1004,81,0	1/1:0,19:19:54.17:670,54,0	1/1:0,18:18:51.16:632,51,0	1/1:1,22:23:60.19:743,60,0	1/1:2,15:17:45.14:557,45,0	1/1:0,25:25:75.23:918,75,0	1/1:0,30:30:87.27:1078,87,0	1/1:3,1:4:8.99:84,9,0
chr10	81274980	.	TA	T	2033.32	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.157;DP=588;FS=9.511;HRun=5;HaplotypeScore=105.0326;InbreedingCoeff=0.9973;MQ=76.97;MQ0=0;MQRankSum=-2.594;QD=25.74;ReadPosRankSum=1.516;VQSLOD=2.5041;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:34:78.22:884,78,0	0/0:11,0:11:30.10:0,30,409	0/0:18,0:18:45.15:0,45,601	0/0:15,0:15:31.41:0,31,441	0/0:29,0:29:87.23:0,87,1150	0/0:28,0:28:81.24:0,81,1073	0/0:17,0:17:45.15:0,45,614	0/0:37,0:37:99:0,99,1339	0/0:21,0:21:63.20:0,63,845	0/0:32,0:31:90.30:0,90,1230	0/0:20,0:20:54.18:0,54,738	0/0:21,0:21:63.20:0,63,845	1/1:1,21:22:50.90:578,51,0	1/1:0,23:23:63.18:714,63,0	0/0:15,0:15:42.14:0,42,574	0/0:16,0:16:48.15:0,48,641	0/0:9,0:9:24.08:0,24,328	0/0:13,0:13:39.13:0,39,532	0/0:26,0:26:75.22:0,75,970	0/0:26,0:26:69.21:0,69,912	0/0:22,0:22:66.20:0,66,883	0/0:22,0:22:57.19:0,57,778	0/0:24,0:24:72.23:0,72,968	0/0:10,0:10:30.10:0,30,407	0/0:22,0:22:57.17:0,57,750	0/0:21,0:21:60.18:0,60,792	0/0:26,0:26:78.26:0,78,1062	0/0:8,0:8:21.07:0,21,287
chr10	81275788	.	AGCCTCGGG	A	1383	PASS	AC=24;AF=0.800;AN=30;BaseQRankSum=3.695;DP=143;FS=41.694;HRun=0;HaplotypeScore=24.3522;InbreedingCoeff=0.4159;MQ=34.49;MQ0=26;MQRankSum=-2.993;QD=23.05;ReadPosRankSum=-1.920;VQSLOD=0.9630;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:8:6.02:171,6,0	0/0:3,0:2:6.02:0,6,277	./.	./.	1/1:0,2:2:6.02:148,6,0	1/1:5,0:1:3:26,3,0	0/0:24,0:18:24.02:0,24,1031	./.	./.	./.	1/1:1,2:3:3.01:57,3,0	./.	./.	./.	0/0:2,0:1:3.01:0,3,95	./.	1/1:2,8:9:9.03:272,9,0	1/1:2,0:1:2.97:20,3,0	1/1:5,2:1:3:26,3,0	1/1:1,5:4:9.03:262,9,0	./.	1/1:2,3:3:3.01:91,3,0	1/1:0,3:3:6.02:148,6,0	./.	1/1:0,4:3:6.02:181,6,0	1/1:1,1:1:3.01:91,3,0	./.	./.
chr10	81281682	.	AT	A	12973.60	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=4.317;DP=525;FS=0.913;HRun=5;HaplotypeScore=123.3751;InbreedingCoeff=0.9898;MQ=59.12;MQ0=1;MQRankSum=-3.521;QD=30.89;ReadPosRankSum=1.359;VQSLOD=3.6707;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.13:0,51,675	0/0:18,0:18:51.13:0,51,659	0/0:16,0:15:34.23:0,34,353	0/0:7,0:5:12.04:0,12,157	1/1:3,26:29:77.90:804,78,0	1/1:3,20:23:66.19:747,66,0	0/0:13,0:13:39.12:0,39,517	1/1:4,24:28:72.13:769,72,0	1/1:1,15:16:48.14:543,48,0	1/1:1,30:31:90.26:1020,90,0	1/1:3,19:22:66.18:738,66,0	1/1:2,6:8:18.05:204,18,0	0/0:18,0:17:51.15:0,51,679	0/0:15,0:15:42.14:0,42,574	1/1:1,11:12:33.09:373,33,0	1/1:2,12:14:42.05:457,42,0	1/1:1,10:11:30.09:340,30,0	1/1:0,6:6:18.05:204,18,0	1/1:4,14:16:48.10:523,48,0	1/1:2,46:48:99:1550,138,0	1/1:0,12:12:36.10:408,36,0	1/1:1,20:21:60.13:665,60,0	1/1:2,21:23:57.16:646,57,0	1/1:0,6:6:18.05:204,18,0	1/1:2,20:22:60.17:679,60,0	1/1:3,25:28:78.21:876,78,0	1/1:4,17:20:51.15:578,51,0	1/1:0,21:21:57.16:645,57,0
chr10	81281739	.	CTATATAATATACATATACATG	C	25559.61	PASS	AB=1.000;AC=45;AF=0.865;AN=52;BaseQRankSum=6.949;DP=304;FS=4.819;HRun=0;HaplotypeScore=240.5230;InbreedingCoeff=0.5810;MQ=50.62;MQ0=1;MQRankSum=-7.262;QD=93.28;ReadPosRankSum=3.429;VQSLOD=4.4138;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,2:8:9.03:378,9,0	0/0:16,0:16:42.14:0,42,3686	0/0:3,0:3:6.02:0,6,288	0/1:9,0:6:9.67:10,0,26	1/1:7,17:24:48.16:2739,48,0	1/1:5,2:7:6.02:347,6,0	0/0:6,0:6:18.06:0,18,1264	1/1:12,1:13:3.01:173,3,0	1/1:4,4:8:12.04:693,12,0	1/1:3,11:14:33.11:1905,33,0	1/1:6,17:23:51.18:2945,51,0	1/1:3,3:6:9.03:520,9,0	1/1:3,6:8:15.05:866,15,0	1/1:4,3:7:9.03:519,9,0	1/1:4,2:6:6.02:347,6,0	1/1:3,14:17:42.14:2426,42,0	1/1:2,1:3:6.01:198,6,0	1/1:0,1:1:3.01:173,3,0	1/1:7,4:9:9.03:385,9,0	1/1:14,22:36:66.23:3809,66,0	./.	1/1:6,9:15:27.09:1559,27,0	1/1:5,8:13:24.08:1386,24,0	./.	1/1:5,10:15:30.10:1733,30,0	1/1:9,2:11:9.02:372,9,0	1/1:4,6:9:21.07:1212,21,0	1/1:3,5:8:15.05:866,15,0
chr10	81281882	.	T	TAGAA	4859.61	PASS	AB=0.800;AC=51;AF=0.981;AN=52;BaseQRankSum=1.671;DP=253;FS=3.693;HRun=0;HaplotypeScore=222.9169;InbreedingCoeff=-0.0195;MQ=43.43;MQ0=0;MQRankSum=-1.732;QD=19.21;ReadPosRankSum=1.474;VQSLOD=4.2942;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,0:9:20.81:144,21,0	0/1:3,1:4:12.06:116,0,12	./.	1/1:0,0:26:58.56:378,59,0	1/1:0,0:10:26.74:183,27,0	1/1:1,0:6:17.77:118,18,0	1/1:0,0:6:18.02:170,18,0	1/1:0,0:7:20.79:142,21,0	1/1:0,0:16:48.04:476,48,0	1/1:1,0:11:26.42:187,26,0	1/1:0,0:8:20.46:127,20,0	1/1:1,0:8:21.98:138,22,0	1/1:0,0:7:17.70:112,18,0	1/1:0,0:10:26.68:176,27,0	1/1:1,0:9:17.57:119,18,0	1/1:0,0:3:5.92:39,6,0	1/1:0,0:1:2.90:16,3,0	1/1:0,0:2:6.01:58,6,0	1/1:1,0:22:59.25:392,59,0	1/1:0,0:1:2.94:18,3,0	1/1:0,0:5:11.79:73,12,0	1/1:0,0:22:61.80:379,62,0	1/1:0,0:1:2.90:16,3,0	1/1:0,0:12:35.61:238,36,0	1/1:0,0:22:65.99:574,66,0	1/1:1,0:21:57.48:404,57,0	1/1:0,0:4:8.64:66,9,0
chr10	81281954	.	ACTATCTACTAT	A	4103.69	PASS	AB=1.000;AC=36;AF=0.750;AN=48;BaseQRankSum=2.157;DP=298;FS=0.000;HRun=0;HaplotypeScore=233.1990;InbreedingCoeff=0.5846;MQ=44.09;MQ0=0;MQRankSum=-3.217;QD=16.28;ReadPosRankSum=1.472;VQSLOD=2.5425;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:6:0:0,0,0	0/0:7,0:7:15.05:0,15,239	0/0:9,0:7:15.05:0,15,210	0/0:6,0:6:13.86:0,14,172	0/1:23,0:23:0:0,0,0	1/1:18,0:18:18.06:449,18,0	0/0:5,0:5:6.02:0,6,84	1/1:29,0:28:42.13:603,42,0	1/1:10,0:10:12.04:295,12,0	1/1:9,0:9:21.07:318,21,0	1/1:21,0:21:2.75:83,3,0	1/1:5,0:5:3.01:83,3,0	1/1:15,0:15:3.01:83,3,0	./.	1/1:8,0:8:3.01:83,3,0	1/1:6,4:10:12.04:396,12,0	./.	0/0:1,0:1:0:0,0,0	1/1:10,0:10:18.06:274,18,0	1/1:15,1:16:6.02:145,6,0	./.	1/1:7,0:7:9.03:236,9,0	1/1:17,0:17:5.98:102,6,0	1/1:3,0:3:3.01:46,3,0	1/1:13,0:13:3.01:83,3,0	1/1:22,0:22:30.10:488,30,0	1/1:10,0:10:18.06:337,18,0	./.
chr10	81281961	.	ACTATCTATCTACTAT	A	4892.19	PASS	AB=0.978;AC=36;AF=0.750;AN=48;BaseQRankSum=1.567;DP=268;FS=0.000;HRun=0;HaplotypeScore=214.3270;InbreedingCoeff=0.5857;MQ=39.21;MQ0=2;MQRankSum=-3.460;QD=21.46;ReadPosRankSum=2.291;VQSLOD=3.6924;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:6:0:0,0,0	0/0:6,0:6:18.05:0,18,314	0/0:8,0:6:15.05:0,15,210	0/0:5,0:5:13.59:0,14,172	0/1:21,1:22:0:0,0,0	1/1:12,5:17:18.06:677,18,0	0/0:3,0:3:6.02:0,6,84	1/1:25,0:23:42.13:603,42,0	1/1:5,3:8:12.04:432,12,0	1/1:7,0:7:21.07:440,21,0	1/1:19,2:21:2.62:128,3,0	1/1:4,1:5:3.01:129,3,0	1/1:13,0:14:3.01:111,3,0	./.	1/1:7,1:8:3.01:129,3,0	1/1:9,0:9:12.02:118,12,0	./.	0/0:1,0:1:0:0,0,0	1/1:9,0:8:18.06:274,18,0	1/1:15,0:15:6.02:75,6,0	./.	1/1:4,3:7:9.03:373,9,0	1/1:14,2:16:6.02:194,6,0	1/1:3,0:3:3.01:46,3,0	1/1:10,0:11:3.01:111,3,0	1/1:15,1:17:30.10:624,30,0	1/1:6,2:8:18.06:429,18,0	./.
chr10	81281972	.	A	AT	2242.03	PASS	AB=0.761;AC=36;AF=0.720;AN=50;BaseQRankSum=2.587;DP=265;FS=2.098;HRun=1;HaplotypeScore=160.2430;InbreedingCoeff=0.3959;MQ=37.89;MQ0=5;MQRankSum=-2.750;QD=10.28;ReadPosRankSum=2.606;VQSLOD=1.9630;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:5,0:7:20.97:0,21,232	0/0:7,0:5:15.05:0,15,207	0/0:5,0:5:14.08:0,14,174	1/1:2,16:20:3.58:9,4,0	1/1:6,10:18:9.02:126,9,0	0/0:3,0:3:6.02:0,6,84	0/1:8,13:17:53.01:570,0,53	1/1:4,3:10:6.08:54,6,0	1/1:1,7:9:22.52:332,23,0	1/1:3,13:17:1.03:3,1,0	1/1:1,2:6:1.49:3,1,0	0/0:3,11:14:0.47:0,0,1	1/1:3,6:9:0.63:1,1,0	1/1:1,5:8:1.48:3,1,0	0/1:7,2:9:0.87:22,0,1	1/1:0,3:4:1.55:4,2,0	0/1:2,0:2:0.91:41,0,1	1/1:2,6:6:18.06:283,18,0	0/1:6,11:17:36.93:37,0,147	./.	1/1:4,3:7:5.55:56,6,0	1/1:2,9:11:4.56:40,5,0	1/1:1,2:3:3.01:46,3,0	1/1:10,7:17:9.14:83,9,0	1/1:2,10:14:30.15:431,30,0	1/1:2,4:8:18.09:241,18,0	./.
chr10	81281979	.	AT	A	463.24	PASS	AB=0.927;AC=11;AF=0.196;AN=56;BaseQRankSum=2.647;DP=283;FS=13.639;HRun=1;HaplotypeScore=158.9628;InbreedingCoeff=0.3425;MQ=39.80;MQ0=5;MQRankSum=-2.841;QD=4.98;ReadPosRankSum=2.786;VQSLOD=-0.7566;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,2:8:0.03:0,0,0	0/0:9,0:9:16.69:0,17,176	0/0:7,0:5:15.05:0,15,229	0/0:5,0:5:0.68:0,1,169	0/0:18,0:18:3.10:0,3,9	0/1:18,0:18:1.82:2,0,87	0/0:3,0:3:6.02:0,6,92	0/0:19,0:14:42.06:0,42,531	0/0:11,0:11:0.51:0,1,16	0/0:11,0:11:29.47:0,29,298	0/1:17,0:17:1.33:2,0,1	0/0:9,0:9:7.27:0,7,113	1/1:11,2:13:5.51:51,6,0	1/1:7,3:10:9.03:123,9,0	0/0:9,0:9:1.26:0,1,47	0/0:10,0:10:2.49:0,2,47	0/0:7,0:7:7.53:0,8,51	0/0:3,0:3:8.76:0,9,98	0/0:7,0:5:15.05:0,15,225	0/0:19,0:19:20.77:0,21,330	0/0:3,0:3:5.38:0,5,51	0/1:6,0:6:1.81:2,0,8	0/0:10,0:10:1.64:0,2,44	0/1:4,1:5:26.95:73,0,27	1/1:7,9:16:26.57:339,27,0	0/0:14,0:14:26.89:0,27,391	0/0:11,0:10:17.06:0,17,214	0/0:5,0:5:5.23:0,5,50
chr10	81282305	.	C	CAG	12346.82	PASS	AB=0.938;AC=49;AF=0.875;AN=56;BaseQRankSum=-4.289;DP=373;FS=0.000;HRun=0;HaplotypeScore=48.9814;InbreedingCoeff=0.7309;MQ=63.77;MQ0=1;MQRankSum=-2.947;QD=35.68;ReadPosRankSum=2.325;VQSLOD=6.6160;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:21:51.17:858,51,0	0/0:5,0:5:9.03:0,9,116	0/0:10,0:8:18.06:0,18,232	0/0:12,0:10:23.65:0,24,272	1/1:4,7:11:12.04:202,12,0	1/1:1,10:11:24.08:405,24,0	0/1:14,1:15:11.39:11,0,424	1/1:4,15:19:48.15:776,48,0	1/1:0,12:12:33.11:557,33,0	1/1:1,10:12:33.07:499,33,0	1/1:2,4:6:9.03:151,9,0	1/1:0,9:9:27.09:455,27,0	1/1:6,7:13:15.05:246,15,0	1/1:1,20:21:63.22:1060,63,0	1/1:1,15:16:42.14:708,42,0	1/1:2,13:16:39.13:654,39,0	1/1:3,27:30:72.25:1213,72,0	1/1:1,12:13:33.11:556,33,0	1/1:5,11:17:36.11:584,36,0	1/1:2,8:10:24.08:405,24,0	1/1:3,11:14:33.11:546,33,0	1/1:3,7:10:18.06:303,18,0	1/1:4,4:8:9.03:152,9,0	1/1:5,11:16:33.11:554,33,0	1/1:2,7:9:21.07:353,21,0	1/1:1,5:6:15.03:227,15,0	1/1:5,15:20:3.55:619,4,0	1/1:1,9:10:15.05:253,15,0
chr10	81282501	.	CT	C	1793.96	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.220;DP=596;FS=4.071;HRun=5;HaplotypeScore=59.2149;InbreedingCoeff=0.9976;MQ=86.71;MQ0=0;MQRankSum=-4.820;QD=28.48;ReadPosRankSum=0.483;VQSLOD=3.8394;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:69.20:781,69,0	0/0:10,0:10:30.07:0,30,391	0/0:23,0:23:60.20:0,60,814	0/0:17,0:18:24.44:0,24,474	0/0:29,0:29:84.28:0,84,1149	0/0:31,0:31:93.31:0,93,1271	0/0:15,0:15:42.14:0,42,573	0/0:34,0:34:90.29:0,90,1213	0/0:17,0:17:51.16:0,51,683	0/0:28,0:28:78.26:0,78,1064	0/0:25,0:25:66.22:0,66,901	0/0:17,0:17:51.17:0,51,698	1/1:0,14:14:35.99:408,36,0	1/1:1,23:24:66.19:748,66,0	0/0:22,0:22:63.16:0,63,827	0/0:17,0:17:51.17:0,51,697	0/0:17,0:17:45.15:0,45,614	0/0:7,0:7:21.07:0,21,280	0/0:16,0:16:42.13:0,42,557	0/0:25,0:25:72.24:0,72,983	0/0:20,0:20:57.19:0,57,779	0/0:17,0:17:42.14:0,42,574	0/0:29,0:29:84.26:0,84,1129	0/0:24,0:24:69.21:0,69,926	0/0:27,0:27:81.27:0,81,1105	0/0:27,0:27:78.22:0,78,1008	0/0:21,0:21:60.19:0,60,802	0/0:17,0:17:51.13:0,51,649
chr10	81282908	.	AT	A	11513.43	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=7.222;DP=498;FS=2.016;HRun=7;HaplotypeScore=99.9785;InbreedingCoeff=0.9957;MQ=74.99;MQ0=0;MQRankSum=-5.647;QD=25.87;ReadPosRankSum=5.084;VQSLOD=4.7851;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:19:54.12:551,54,0	0/0:8,0:7:18.05:0,18,214	0/0:12,0:11:30.06:0,30,350	0/0:17,0:18:39.60:0,40,463	1/1:4,20:24:54.11:551,54,0	1/1:2,15:17:33.07:337,33,0	0/0:15,0:15:42.13:0,42,528	1/1:4,24:28:72.14:722,72,0	1/1:2,17:19:48.11:490,48,0	1/1:0,19:19:57.11:573,57,0	1/1:3,18:21:48.10:489,48,0	1/1:1,11:12:30.07:306,30,0	1/1:0,23:23:57.13:582,57,0	1/1:1,12:13:33.08:337,33,0	1/1:2,18:20:51.12:520,51,0	1/1:0,12:12:36.08:367,36,0	1/1:2,14:16:42.09:428,42,0	1/1:4,13:17:47.27:449,47,0	1/1:6,19:25:57.12:581,57,0	1/1:0,26:26:78.09:781,78,0	1/1:0,7:7:21.05:214,21,0	1/1:0,9:9:27.06:275,27,0	1/1:3,23:26:57.06:581,57,0	1/1:1,13:14:33.07:337,33,0	1/1:2,17:19:42.09:428,42,0	1/1:2,24:26:72.14:727,72,0	1/1:1,17:18:51.12:520,51,0	1/1:1,14:15:36.08:367,36,0
chr10	81283076	.	GA	G	16038.85	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=2.555;DP=446;FS=19.054;HRun=1;HaplotypeScore=45.4607;InbreedingCoeff=0.9717;MQ=63.12;MQ0=0;MQRankSum=-0.372;QD=38.93;ReadPosRankSum=4.320;VQSLOD=2.9083;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:81.27:1133,81,0	0/0:6,0:6:18.06:0,18,285	0/0:14,0:14:39.09:0,39,621	0/0:8,0:6:10.58:0,11,113	1/1:0,26:26:78.26:1091,78,0	1/1:0,16:16:45.15:629,45,0	0/0:6,0:6:18.06:0,18,288	1/1:0,22:22:66.21:905,66,0	1/1:0,14:14:36.12:504,36,0	1/1:0,16:16:48.14:654,48,0	1/1:0,24:24:69.23:957,69,0	1/1:0,16:16:39.13:545,39,0	1/1:0,18:18:54.18:755,54,0	1/1:0,16:16:42.14:587,42,0	1/1:0,12:12:33.11:462,33,0	1/1:0,9:9:27.09:378,27,0	1/1:0,20:20:57.19:797,57,0	1/1:2,14:16:39.13:540,39,0	1/1:0,15:15:45.15:629,45,0	1/1:0,19:19:51.17:709,51,0	1/1:0,6:6:18.06:252,18,0	1/1:0,11:11:30.10:413,30,0	1/1:0,26:26:72.02:1000,72,0	1/1:1,10:11:24.08:336,24,0	1/1:0,17:17:45.15:629,45,0	1/1:0,28:28:84.28:1171,84,0	1/1:0,20:20:57.19:797,57,0	1/1:0,4:4:12.04:168,12,0
chr10	81283544	.	T	TA	16087.14	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=5.949;DP=541;FS=11.989;HRun=3;HaplotypeScore=138.5480;InbreedingCoeff=0.9990;MQ=68.45;MQ0=0;MQRankSum=-10.668;QD=34.45;ReadPosRankSum=3.637;VQSLOD=2.9045;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:12:30.10:418,30,0	0/0:12,0:12:33.10:0,33,396	0/0:25,0:25:47.88:0,48,650	0/0:22,0:22:63.17:0,63,736	1/1:3,26:29:63.17:858,63,0	1/1:4,21:25:66.13:878,66,0	0/0:15,0:15:45.14:0,45,539	1/1:8,21:29:87.22:1145,87,0	1/1:0,19:19:54.15:733,54,0	1/1:3,15:18:54.18:755,54,0	1/1:4,18:22:51.13:680,51,0	1/1:2,11:13:33.11:461,33,0	1/1:1,12:13:39.04:501,39,0	1/1:5,22:27:63.12:836,63,0	1/1:3,17:19:51.10:671,51,0	1/1:0,20:20:57.16:776,57,0	1/1:3,12:15:33.07:434,33,0	1/1:2,7:9:27.08:358,27,0	1/1:7,13:20:42.14:574,42,0	1/1:2,18:20:51.13:691,51,0	1/1:1,10:11:30.06:398,30,0	1/1:6,20:26:51.07:651,51,0	1/1:3,28:31:81.18:1087,81,0	1/1:2,9:11:30.10:420,30,0	1/1:2,20:22:57.06:731,57,0	1/1:2,17:19:51.17:708,51,0	1/1:6,19:25:63.17:860,63,0	1/1:0,11:11:33.11:462,33,0
chr10	81283564	.	CAT	C	1411.29	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=11.513;DP=512;FS=3.992;HRun=0;HaplotypeScore=227.3802;InbreedingCoeff=0.8724;MQ=72.63;MQ0=0;MQRankSum=-11.549;QD=3.15;ReadPosRankSum=2.954;VQSLOD=2.6387;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,1:16:13.40:61,13,0	0/0:10,0:10:30.08:0,30,496	0/0:18,0:17:51.15:0,51,830	0/0:20,0:20:42.76:0,43,727	1/1:30,0:30:13.06:50,13,0	1/1:22,0:22:20.55:65,21,0	0/0:16,0:16:48.12:0,48,798	1/1:26,0:26:19.49:51,19,0	1/1:21,1:22:17.51:79,18,0	1/1:21,0:21:16.83:42,17,0	1/1:21,0:21:21.06:89,21,0	1/1:14,0:14:15.70:70,16,0	1/1:17,0:17:14.41:38,14,0	1/1:22,1:23:24.08:97,24,0	1/1:15,0:15:11.52:30,12,0	1/1:18,0:18:17.54:63,18,0	1/1:12,0:12:9.14:34,9,0	1/1:7,0:7:5.32:14,5,0	1/1:19,2:21:22.71:110,23,0	1/1:17,2:19:19.29:86,19,0	1/1:7,2:9:14.58:95,15,0	1/1:24,0:24:18.26:47,18,0	1/1:28,2:30:36.90:194,37,0	1/1:7,1:8:8.31:37,8,0	1/1:24,1:25:20.72:73,21,0	1/1:17,0:17:17.18:64,17,0	1/1:20,0:20:18.06:64,18,0	1/1:11,0:11:9.74:25,10,0
chr10	81283566	.	TA	T	15840.62	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=10.216;DP=494;FS=2.404;HRun=1;HaplotypeScore=164.1837;InbreedingCoeff=0.9942;MQ=73.12;MQ0=0;MQRankSum=-11.408;QD=36.84;ReadPosRankSum=2.714;VQSLOD=4.5248;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,12:16:30.04:376,30,0	0/0:10,0:10:30.07:0,30,417	0/0:18,0:17:51.16:0,51,736	0/0:20,0:20:27.21:0,27,600	1/1:1,28:29:69.05:846,69,0	1/1:3,19:22:66.22:908,66,0	0/0:16,0:16:48.13:0,48,690	1/1:0,22:22:66.22:919,66,0	1/1:1,20:21:60.12:769,60,0	1/1:1,19:20:57.19:791,57,0	1/1:2,19:21:57.17:759,57,0	1/1:1,12:13:39.12:523,39,0	1/1:0,16:16:48.16:660,48,0	1/1:2,21:23:69.21:922,69,0	1/1:0,14:14:39.13:541,39,0	1/1:1,17:18:51.16:694,51,0	1/1:1,11:12:24.08:330,24,0	1/1:0,6:6:18.06:251,18,0	1/1:3,17:20:57.12:722,57,0	1/1:2,17:19:51.15:677,51,0	1/1:2,6:8:20.95:214,21,0	1/1:1,23:24:66.13:857,66,0	1/1:5,23:28:84.12:1041,84,0	1/1:1,7:8:21.05:273,21,0	1/1:2,22:24:66.17:881,66,0	1/1:1,16:17:51.16:695,51,0	1/1:1,17:18:54.17:734,54,0	1/1:0,11:11:33.11:459,33,0
chr10	81285560	.	AT	A	1373.87	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-8.436;DP=443;FS=6.160;HRun=8;HaplotypeScore=89.0443;InbreedingCoeff=0.7768;MQ=70.07;MQ0=2;MQRankSum=-1.038;QD=21.81;ReadPosRankSum=1.976;VQSLOD=3.9379;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:59.13:556,59,0	0/0:6,0:6:15.05:0,15,181	0/0:13,0:12:0.12:0,0,242	0/1:6,0:4:6.71:7,0,29	0/0:3,0:17:40.27:0,40,210	0/0:3,0:14:31.63:0,32,161	0/0:12,0:12:30.08:0,30,350	0/0:3,0:16:37.20:0,37,188	0/0:5,0:23:48.88:0,49,249	0/0:1,0:24:66.08:0,66,341	0/0:1,0:27:72.10:0,72,381	0/0:0,0:10:25.88:0,26,132	1/1:1,21:22:63.10:608,63,0	1/1:1,12:13:36.06:348,36,0	0/0:2,0:12:23.12:0,23,127	0/0:1,0:8:23.13:0,23,129	0/0:3,0:18:34.59:0,35,186	0/0:1,0:11:28.82:0,29,153	0/0:5,0:20:48.76:0,49,254	0/0:1,0:23:66.33:0,66,349	0/0:1,0:11:20.13:0,20,102	0/0:1,0:12:28.72:0,29,146	0/0:1,0:17:43.05:0,43,218	0/0:3,0:15:37.13:0,37,194	0/0:0,0:21:57.39:0,57,291	0/0:3,0:23:57.49:0,57,294	0/0:0,0:21:51.75:0,52,263	0/0:0,0:4:11.50:0,12,58
chr10	81285794	.	TAC	T	658.22	PASS	AB=0.894;AC=30;AF=0.625;AN=48;BaseQRankSum=1.909;DP=405;FS=0.907;HRun=0;HaplotypeScore=58.6938;InbreedingCoeff=0.3972;MQ=56.83;MQ0=15;MQRankSum=0.436;QD=3.02;ReadPosRankSum=2.280;VQSLOD=1.7176;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:16:8.09:8,0,17	0/1:5,2:7:23.23:23,0,58	./.	./.	1/1:12,0:13:6.32:43,6,0	0/0:12,0:12:11.96:0,12,94	0/1:13,0:12:9.06:9,0,162	0/0:32,0:32:9.66:0,10,55	0/0:9,0:10:2.02:0,2,24	1/1:6,0:6:9.12:57,9,0	0/1:17,0:15:6.25:45,0,6	0/0:9,0:9:6.48:0,6,60	1/1:8,0:8:2.24:5,2,0	1/1:3,0:6:2.84:14,3,0	1/1:8,4:12:5.72:43,6,0	./.	1/1:8,8:16:6.01:62,6,0	1/1:13,1:14:0.86:58,1,0	1/1:16,4:20:9.90:90,10,0	1/1:8,9:17:9.02:97,9,0	1/1:7,1:8:8.34:55,8,0	0/0:7,0:8:9.81:0,10,69	0/0:10,0:10:9.46:0,9,91	0/0:27,0:27:19.56:0,20,191	1/1:14,4:17:5.23:40,5,0	1/1:20,0:20:11.61:101,12,0	1/1:7,0:7:8.72:69,9,0	./.
chr10	81286529	.	CT	C	2753.51	PASS	AB=0.800;AC=27;AF=0.482;AN=56;BaseQRankSum=0.284;DP=492;FS=13.288;HRun=14;HaplotypeScore=93.9194;InbreedingCoeff=0.4325;MQ=60.77;MQ0=1;MQRankSum=-2.530;QD=8.37;ReadPosRankSum=4.366;VQSLOD=1.3636;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:14:27.49:0,27,168	0/0:13,0:14:29.18:0,29,293	0/0:21,0:12:0.30:0,0,90	0/1:15,1:13:10.18:10,0,23	0/1:15,12:28:28.06:258,0,28	0/1:13,3:16:19.73:20,0,253	0/0:12,1:12:6.45:0,6,198	0/1:26,12:40:4.72:195,0,5	0/0:18,0:18:24.31:0,24,322	0/1:7,5:13:21.04:103,0,21	1/1:11,10:22:15.74:244,16,0	0/0:5,0:5:11.87:0,12,95	0/0:11,0:12:21.31:0,21,109	0/0:19,0:20:40.82:0,41,247	1/1:9,8:18:7.75:185,8,0	1/1:7,6:13:25.66:164,26,0	0/1:13,1:14:28.12:29,0,28	1/1:1,2:3:5.95:41,6,0	0/1:11,3:14:14.88:50,0,15	1/1:10,14:25:28.29:310,28,0	1/1:7,7:16:27.83:176,28,0	0/0:18,1:19:14.63:0,15,301	0/0:19,1:22:12.63:0,13,253	0/0:5,0:5:8.93:0,9,67	1/1:13,9:22:16.70:258,17,0	1/1:16,7:24:31.51:208,32,0	1/1:13,20:34:79.17:532,79,0	1/1:3,6:10:25.80:168,26,0
chr10	81286565	.	GTT	G	7393.12	PASS	AB=0.702;AC=45;AF=0.804;AN=56;BaseQRankSum=-0.840;DP=480;FS=4.277;HRun=12;HaplotypeScore=92.7387;InbreedingCoeff=0.7239;MQ=58.35;MQ0=0;MQRankSum=0.302;QD=17.03;ReadPosRankSum=2.757;VQSLOD=4.2532;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:16:7.49:7,0,61	0/0:10,0:10:27.08:0,27,360	0/0:15,0:10:14.98:0,15,169	0/1:12,0:7:3.46:3,0,12	1/1:6,20:27:47.71:469,48,0	1/1:1,0:22:46.64:202,47,0	0/0:8,0:7:18.04:0,18,230	1/1:11,17:28:53.63:520,54,0	1/1:1,0:17:38.34:165,38,0	1/1:4,14:20:34.72:399,35,0	1/1:3,22:26:65.83:652,66,0	1/1:1,0:8:16.46:71,16,0	0/0:3,0:12:25.19:0,25,122	0/1:2,1:14:4.38:4,0,63	1/1:3,15:18:40.78:425,41,0	1/1:0,11:13:23.55:278,24,0	1/1:1,15:17:41.76:395,42,0	1/1:1,2:3:6:61,6,0	1/1:6,13:19:45.06:449,45,0	1/1:5,26:32:74.84:811,75,0	1/1:4,7:12:21.01:213,21,0	1/1:4,0:23:21.81:146,22,0	1/1:2,0:14:27.44:119,27,0	1/1:1,0:8:16.46:71,16,0	1/1:2,17:19:51.02:505,51,0	1/1:3,19:24:62.54:592,63,0	1/1:5,23:30:56.56:683,57,0	1/1:3,7:10:14.98:153,15,0
chr10	81287534	.	G	GT	742.64	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-2.484;DP=511;FS=1.528;HRun=8;HaplotypeScore=94.6294;InbreedingCoeff=0.8272;MQ=63.87;MQ0=1;MQRankSum=0.466;QD=13.03;ReadPosRankSum=0.693;VQSLOD=3.4343;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,11:13:16.91:361,17,0	0/0:3,0:3:6:0,6,55	0/0:17,0:18:46.45:0,46,405	0/0:19,0:17:22.58:0,23,337	0/0:25,0:25:72.04:0,72,659	0/0:14,0:14:21.77:0,22,53	0/0:12,0:12:33.02:0,33,302	0/0:25,0:25:60:0,60,546	0/0:15,0:15:20.21:0,20,49	0/0:26,0:26:72.03:0,72,654	0/0:29,0:29:75.02:0,75,682	0/0:14,0:14:20.21:0,20,49	1/1:1,9:10:21.06:242,21,0	1/1:4,8:12:24.07:277,24,0	0/0:15,0:15:39.01:0,39,357	0/0:13,0:13:36.02:0,36,330	0/0:24,0:24:60.89:0,61,573	0/0:13,0:13:39.02:0,39,356	0/0:19,0:20:41.06:0,41,363	0/0:28,0:28:81:0,81,727	0/0:10,0:10:21:0,21,192	0/1:21,0:21:4.04:4,0,36	0/0:26,0:25:32.26:0,32,79	0/0:14,0:14:11.35:0,11,28	0/0:22,0:22:63.03:0,63,576	0/0:23,0:23:63.03:0,63,577	0/0:31,0:31:87.05:0,87,796	0/0:15,0:15:45.02:0,45,411
chr10	81287541	.	TTA	T	3890.84	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.253;DP=517;FS=9.776;HRun=0;HaplotypeScore=100.1549;InbreedingCoeff=0.9855;MQ=63.88;MQ0=2;MQRankSum=-1.190;QD=36.36;ReadPosRankSum=3.250;VQSLOD=5.9306;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:33.59:0,34,284	0/0:3,0:3:9.03:0,9,155	0/0:22,0:21:45.52:0,46,894	0/0:18,0:16:47.35:0,47,678	0/0:27,0:27:81.23:0,81,1312	1/1:0,15:15:42.14:608,42,0	0/0:12,0:12:36.11:0,36,591	0/0:25,0:25:69.19:0,69,1088	1/1:1,15:16:39.13:564,39,0	0/0:27,0:27:78.25:0,78,1290	0/0:28,0:28:84.26:0,84,1397	1/1:0,13:13:39.13:565,39,0	0/0:11,0:11:27.03:0,27,275	0/0:9,0:9:24.02:0,24,227	0/0:15,0:15:42.13:0,42,711	0/0:14,0:14:42.11:0,42,671	0/0:26,0:26:63.13:0,63,1160	0/0:15,0:15:45.10:0,45,692	0/0:18,0:18:47.93:0,48,741	0/0:29,0:29:87.26:0,87,1418	0/0:8,0:8:24.08:0,24,403	1/1:0,22:22:66.09:884,66,0	1/1:0,27:26:62.98:911,63,0	1/1:2,12:14:18.11:358,18,0	0/0:21,0:21:63.22:0,63,1078	0/0:23,0:23:69.22:0,69,1139	0/0:31,0:31:93.28:0,93,1543	0/0:15,0:15:45.11:0,45,717
chr10	81287963	.	GT	G	13809.03	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=3.180;DP=588;FS=1.718;HRun=7;HaplotypeScore=62.9689;InbreedingCoeff=0.9984;MQ=82.12;MQ0=0;MQRankSum=-7.380;QD=26.50;ReadPosRankSum=4.883;VQSLOD=5.3572;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:52.78:684,53,0	0/0:7,0:7:21.07:0,21,264	0/0:23,0:23:57.14:0,57,675	0/0:19,0:19:45.14:0,45,545	1/1:2,27:29:75.08:743,75,0	1/1:2,22:24:57.13:582,57,0	0/0:18,0:18:51.16:0,51,641	1/1:4,30:34:87.17:880,87,0	1/1:2,17:19:51.12:520,51,0	1/1:2,26:28:78.17:795,78,0	1/1:1,22:23:60.13:612,60,0	1/1:0,12:12:33.08:337,33,0	1/1:1,27:28:78.17:795,78,0	1/1:2,25:27:69.16:704,69,0	1/1:3,20:23:60.13:612,60,0	1/1:3,18:21:51.11:520,51,0	1/1:3,16:19:48.05:478,48,0	1/1:1,13:14:36.08:367,36,0	1/1:2,12:14:36.07:367,36,0	1/1:4,25:29:75.16:765,75,0	1/1:1,17:18:51.12:520,51,0	1/1:2,14:16:39.09:398,39,0	1/1:0,25:25:69.16:704,69,0	1/1:0,10:10:27.06:275,27,0	1/1:1,22:23:57.13:582,57,0	1/1:4,14:18:42.03:406,42,0	1/1:1,27:28:78.18:795,78,0	1/1:0,12:12:36.08:367,36,0
chr10	81289182	.	G	GT	2390.99	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-2.508;DP=609;FS=0.000;HRun=10;HaplotypeScore=89.4858;InbreedingCoeff=0.8771;MQ=75.64;MQ0=0;MQRankSum=0.507;QD=15.94;ReadPosRankSum=-0.753;VQSLOD=3.6271;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:28:38.70:0,39,112	0/0:13,0:13:35.80:0,36,285	0/1:21,0:19:18.11:18,0,105	0/0:15,0:15:21.86:0,22,143	0/0:34,1:35:63.86:0,64,721	1/1:5,18:23:48.12:512,48,0	0/0:13,0:13:38.96:0,39,320	0/0:34,0:34:83.62:0,84,670	1/1:4,15:19:17.46:391,17,0	0/0:28,2:30:13.92:0,14,527	0/0:24,0:25:55.92:0,56,447	1/1:3,14:18:35.96:365,36,0	0/0:2,0:19:30.55:0,31,88	0/0:1,0:13:22.41:0,22,65	0/0:15,1:17:14.99:0,15,319	0/0:13,0:13:35.95:0,36,296	0/0:35,0:36:99:0,107,863	0/0:12,0:12:28.75:0,29,222	0/0:18,0:18:44.90:0,45,363	0/0:41,1:42:75.86:0,76,827	0/0:18,0:18:50.94:0,51,419	1/1:5,16:21:14.45:359,14,0	1/1:8,25:33:32.33:551,32,0	1/1:2,13:15:36.09:383,36,0	0/0:19,0:19:47.88:0,48,385	0/0:21,0:21:62.91:0,63,515	0/0:34,0:34:95.79:0,96,777	0/0:4,0:4:8.98:0,9,74
chr10	81290070	.	GTAA	G	21687.35	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=6.532;DP=607;FS=12.248;HRun=0;HaplotypeScore=124.3935;InbreedingCoeff=0.9998;MQ=85.41;MQ0=0;MQRankSum=-8.415;QD=41.00;ReadPosRankSum=5.650;VQSLOD=5.6479;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:63.21:1012,63,0	0/0:11,0:11:30.10:0,30,660	0/0:18,0:18:48.14:0,48,967	0/0:26,0:26:47.81:0,48,1041	1/1:1,31:32:84.29:1348,84,0	1/1:2,21:23:60.20:964,60,0	0/0:23,0:23:54.19:0,54,1172	1/1:1,17:18:45.15:719,45,0	1/1:3,23:26:66.23:1060,66,0	1/1:0,27:27:81.26:1266,81,0	1/1:2,20:22:54.18:867,54,0	1/1:0,23:23:57.19:916,57,0	1/1:1,21:22:57.19:916,57,0	1/1:1,16:17:42.14:675,42,0	1/1:0,16:16:48.16:771,48,0	1/1:1,17:18:45.15:723,45,0	1/1:1,22:23:54.18:868,54,0	1/1:0,13:13:39.13:627,39,0	1/1:2,16:18:45.15:715,45,0	1/1:1,21:22:63.21:1011,63,0	1/1:3,22:25:57.19:916,57,0	1/1:2,27:29:69.24:1108,69,0	1/1:0,16:16:42.14:674,42,0	1/1:0,24:24:45.15:723,45,0	1/1:1,24:24:54.18:867,54,0	1/1:1,19:20:57.19:916,57,0	1/1:1,28:29:81.28:1301,81,0	1/1:0,16:16:45.15:723,45,0
chr10	81290557	.	A	AC	184.35	PASS	AB=0.600;AC=23;AF=0.676;AN=34;BaseQRankSum=4.008;DP=133;FS=15.124;HRun=0;HaplotypeScore=20.8097;InbreedingCoeff=0.4611;MQ=71.62;MQ0=10;MQRankSum=-0.867;QD=4.73;ReadPosRankSum=-2.349;VQSLOD=0.5387;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:2,0:2:6.01:0,6,67	0/0:21,0:7:18.06:0,18,248	0/0:33,0:11:26.36:0,26,277	./.	./.	0/0:16,0:13:24.08:0,24,335	./.	1/1:0,1:1:1.55:4,2,0	0/1:1,2:3:2.08:28,0,2	./.	./.	1/1:4,3:1:3.01:37,3,0	1/1:2,3:2:3.01:48,3,0	./.	1/1:2,0:1:3:25,3,0	1/1:5,0:4:2.98:22,3,0	1/1:2,0:1:2.99:24,3,0	./.	1/1:2,1:2:5.37:33,5,0	0/0:4,0:2:3.01:0,3,42	./.	1/1:0,1:1:2.22:7,2,0	./.	1/1:1,3:1:2.50:9,2,0	1/1:4,1:3:8.93:67,9,0	1/1:0,1:1:0.89:2,1,0	./.
chr10	81290708	.	T	TA	2700.14	PASS	AC=46;AF=0.852;AN=54;BaseQRankSum=5.066;DP=195;FS=36.408;HRun=7;HaplotypeScore=64.0738;InbreedingCoeff=0.6673;MQ=52.12;MQ0=1;MQRankSum=-5.780;QD=18.12;ReadPosRankSum=-0.671;VQSLOD=1.3996;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,6:7:9.03:108,9,0	0/0:6,0:6:18.03:0,18,174	0/0:8,0:4:8.49:0,8,82	0/0:16,0:12:16.39:0,16,181	1/1:2,10:12:32.63:332,33,0	1/1:4,0:9:11.98:63,12,0	0/0:15,0:15:21.02:0,21,203	1/1:7,7:13:31.71:278,32,0	1/1:0,0:2:2.88:15,3,0	1/1:5,4:9:20.07:175,20,0	1/1:1,1:2:3.01:34,3,0	./.	1/1:0,7:7:21.06:253,21,0	1/1:1,9:10:24.07:286,24,0	1/1:1,2:3:5.60:45,6,0	1/1:2,1:3:5.36:22,5,0	1/1:3,2:5:8.76:58,9,0	1/1:2,3:4:11.70:115,12,0	1/1:5,1:6:11.31:76,11,0	1/1:1,5:5:9.02:104,9,0	1/1:1,1:2:3.01:34,3,0	1/1:2,0:2:1.82:5,2,0	1/1:0,0:4:11.47:58,11,0	1/1:0,0:1:2.04:6,2,0	1/1:4,6:10:25.73:220,26,0	1/1:7,4:10:28.95:232,29,0	1/1:7,5:12:25.77:221,26,0	1/1:1,5:4:11.70:115,12,0
chr10	81290711	.	A	AAT	2438.44	PASS	AB=0.824;AC=41;AF=0.732;AN=56;BaseQRankSum=2.511;DP=205;FS=11.071;HRun=0;HaplotypeScore=68.7263;InbreedingCoeff=0.4423;MQ=55.11;MQ0=1;MQRankSum=-2.891;QD=16.48;ReadPosRankSum=-2.096;VQSLOD=2.2104;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:11.94:0,12,59	0/0:6,0:6:18.06:0,18,275	0/0:11,0:5:9.03:0,9,137	0/1:16,0:13:8.98:9,0,283	1/1:11,1:12:10.34:175,10,0	1/1:8,0:8:17.96:178,18,0	0/0:15,0:15:32.99:0,33,410	0/1:10,4:13:20.65:247,0,21	1/1:2,0:2:3:29,3,0	0/1:6,3:9:12.68:177,0,13	1/1:2,0:2:2.96:19,3,0	1/1:2,0:2:5.99:49,6,0	0/0:8,0:8:15.71:0,16,62	0/0:10,0:10:18.81:0,19,70	1/1:2,1:3:5.97:73,6,0	1/1:1,2:3:6.02:108,6,0	1/1:3,2:5:3.72:135,4,0	1/1:5,1:5:2.47:67,2,0	1/1:5,2:7:5.52:140,6,0	1/1:7,0:6:8.32:82,8,0	1/1:2,0:2:2.96:19,3,0	1/1:2,0:2:2.90:16,3,0	1/1:6,0:5:12.02:121,12,0	1/1:2,0:2:6:57,6,0	1/1:7,3:10:20.39:266,20,0	1/1:8,3:10:26.88:314,27,0	1/1:9,3:12:2.26:245,2,0	1/1:5,1:4:5.43:87,5,0
chr10	81290726	.	TA	T	5147.56	PASS	AB=0.609;AC=44;AF=0.786;AN=56;BaseQRankSum=1.572;DP=284;FS=27.647;HRun=4;HaplotypeScore=68.1830;InbreedingCoeff=0.4741;MQ=66.83;MQ0=1;MQRankSum=-2.298;QD=22.38;ReadPosRankSum=1.370;VQSLOD=3.1213;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:21.06:249,21,0	0/0:7,0:7:18.06:0,18,251	0/0:17,0:11:25.26:0,25,309	0/0:17,0:15:28.98:0,29,356	1/1:10,6:16:7.65:216,8,0	0/1:4,6:10:42.45:123,0,42	0/0:13,0:13:27.09:0,27,377	0/1:6,16:21:55.08:507,0,55	1/1:2,4:6:11.87:122,12,0	0/1:5,7:12:59.25:230,0,59	1/1:1,5:6:14.78:153,15,0	1/1:0,5:5:9.03:108,9,0	1/1:0,12:12:33.10:393,33,0	1/1:0,11:11:27.08:320,27,0	1/1:3,1:4:8.76:80,9,0	1/1:0,3:3:9.03:107,9,0	0/1:2,4:6:32.75:120,0,33	1/1:2,5:7:11.77:119,12,0	1/1:2,13:15:17.20:439,17,0	1/1:4,6:9:6.58:187,7,0	1/1:1,3:4:5.75:48,6,0	1/1:0,4:4:9.03:105,9,0	1/1:5,4:8:20.39:164,20,0	1/1:1,4:5:12.04:143,12,0	1/1:4,7:11:29.03:260,29,0	1/1:4,16:19:56.37:599,56,0	1/1:5,7:12:29.03:260,29,0	1/1:5,2:5:11.51:96,12,0
chr10	81290727	.	A	AAAATAAAAT	11244.85	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-1.714;DP=284;FS=18.328;HRun=0;HaplotypeScore=85.1293;InbreedingCoeff=0.5818;MQ=67.00;MQ0=1;MQRankSum=-3.481;QD=48.89;ReadPosRankSum=-1.802;VQSLOD=2.7483;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:13.35:139,0,13	0/0:8,0:8:18.06:0,18,501	0/0:17,0:12:26.30:0,26,392	0/0:16,0:14:27.84:0,28,403	1/1:8,7:15:39.06:1225,39,0	1/1:10,0:10:16.23:254,16,0	0/0:13,0:13:27.09:0,27,702	1/1:22,0:20:57.10:950,57,0	1/1:4,0:6:12.04:189,12,0	1/1:12,1:13:33.06:768,33,0	1/1:5,1:6:15.05:284,15,0	1/1:5,0:5:9.03:157,9,0	0/1:12,0:12:79.53:86,0,80	0/1:11,0:11:46.53:47,0,82	1/1:2,2:4:9.03:266,9,0	1/1:3,0:3:9.03:216,9,0	1/1:6,0:6:18.06:573,18,0	1/1:6,1:7:15.05:448,15,0	1/1:15,0:15:45.08:638,45,0	1/1:8,2:9:24.01:533,24,0	1/1:3,1:4:6.02:179,6,0	1/1:4,0:4:9.03:105,9,0	1/1:5,0:8:21.07:429,21,0	1/1:4,0:5:12.04:204,12,0	1/1:7,4:11:30.10:965,30,0	1/1:17,3:19:57.17:1213,57,0	1/1:8,4:12:30.10:964,30,0	1/1:5,2:5:12.04:413,12,0
chr10	81291339	.	G	GA	15192.38	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=2.216;DP=545;FS=11.281;HRun=7;HaplotypeScore=101.4651;InbreedingCoeff=0.9873;MQ=79.06;MQ0=0;MQRankSum=-5.160;QD=30.69;ReadPosRankSum=2.560;VQSLOD=3.8951;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:14:33.10:399,33,0	0/0:13,0:13:36.06:0,36,347	0/0:19,0:19:45.06:0,45,431	0/0:8,0:8:17.98:0,18,161	1/1:1,25:26:72.09:821,72,0	1/1:4,15:19:42.13:507,42,0	0/0:10,0:10:27.04:0,27,261	1/1:3,16:19:48.15:580,48,0	1/1:1,25:26:75.23:906,75,0	1/1:7,25:32:78.13:922,78,0	1/1:5,25:30:75.10:857,75,0	1/1:2,20:22:54.17:652,54,0	1/1:0,13:13:36.11:435,36,0	1/1:2,16:18:51.11:600,51,0	1/1:2,33:35:93.28:1124,93,0	1/1:3,20:23:57.17:689,57,0	1/1:0,21:21:57.17:688,57,0	1/1:1,13:14:36.09:421,36,0	1/1:1,9:10:27.06:313,27,0	1/1:0,24:24:72.22:870,72,0	1/1:1,15:16:42.13:507,42,0	1/1:5,13:18:39.12:471,39,0	1/1:2,26:28:69.10:833,69,0	1/1:1,11:12:21.06:254,21,0	1/1:0,19:19:51.16:616,51,0	1/1:2,19:21:57.17:678,57,0	1/1:2,29:30:75.23:906,75,0	1/1:0,4:4:12.04:145,12,0
chr10	81291572	.	TA	T	5977.61	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=7.187;DP=510;FS=4.007;HRun=1;HaplotypeScore=149.6513;InbreedingCoeff=0.9761;MQ=65.67;MQ0=0;MQRankSum=-0.680;QD=12.83;ReadPosRankSum=3.390;VQSLOD=4.2409;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,1:28:56.08:342,56,0	0/0:8,0:8:24.08:0,24,357	0/0:15,0:15:39.11:0,39,532	0/0:5,0:5:15.05:0,15,198	1/1:29,2:31:63.68:322,64,0	1/1:27,0:27:59.36:283,59,0	0/0:16,0:16:48.09:0,48,631	1/1:30,1:31:85.66:596,86,0	1/1:13,0:13:33.69:178,34,0	1/1:25,0:25:54.11:333,54,0	1/1:24,1:25:60:313,60,0	1/1:13,0:13:26.10:175,26,0	1/1:11,0:11:24.99:136,25,0	1/1:11,0:11:25.75:125,26,0	1/1:15,1:16:40.62:257,41,0	1/1:15,1:16:41.77:249,42,0	1/1:11,3:14:29.85:234,30,0	1/1:17,2:19:40.78:218,41,0	1/1:16,2:17:40.57:266,41,0	1/1:23,0:23:42.42:209,42,0	1/1:11,1:12:32.43:158,32,0	1/1:21,0:21:52.98:246,53,0	1/1:12,0:12:8.66:97,9,0	1/1:20,0:20:42.80:213,43,0	1/1:21,0:21:57.98:274,58,0	1/1:21,0:21:60.24:310,60,0	1/1:22,1:23:58.56:301,59,0	1/1:15,0:15:33.99:144,34,0
chr10	81292995	.	T	TA	118.12	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.093;DP=418;FS=4.515;HRun=8;HaplotypeScore=41.6185;InbreedingCoeff=0.5891;MQ=72.64;MQ0=0;MQRankSum=1.165;QD=5.62;ReadPosRankSum=-1.587;VQSLOD=-0.4597;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:34.20:0,34,350	0/0:10,0:10:27.01:0,27,247	0/1:12,0:12:5.87:6,0,76	0/0:4,0:4:3.26:0,3,37	0/0:21,0:21:57.01:0,57,514	0/0:17,0:17:42.02:0,42,384	1/1:2,7:9:18.05:208,18,0	0/0:31,0:31:80.96:0,81,727	0/0:17,0:17:42.02:0,42,384	0/0:23,0:23:63.02:0,63,576	0/0:23,0:23:59.99:0,60,539	0/0:14,0:14:39.01:0,39,352	0/0:17,0:17:36:0,36,329	0/0:12,0:12:33.02:0,33,302	0/0:16,0:16:42.02:0,42,384	0/0:14,0:14:38.99:0,39,348	0/0:10,0:10:27.01:0,27,247	0/0:13,0:13:30.01:0,30,274	0/0:14,0:14:39.02:0,39,357	0/0:27,0:28:80:0,80,710	0/0:10,0:10:27.01:0,27,247	0/0:6,0:6:12:0,12,110	0/0:15,0:15:45.02:0,45,409	0/0:6,0:6:18.01:0,18,165	0/0:20,0:20:54.03:0,54,494	0/0:18,0:18:48.02:0,48,439	0/0:19,0:19:57.03:0,57,521	0/0:5,0:5:14.98:0,15,131
chr10	81294356	.	AT	A	2064.51	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=3.918;DP=537;FS=3.732;HRun=11;HaplotypeScore=77.6390;InbreedingCoeff=0.8978;MQ=77.73;MQ0=0;MQRankSum=0.661;QD=16.26;ReadPosRankSum=3.916;VQSLOD=4.6217;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:34:77.37:0,77,439	0/0:9,0:9:24.06:0,24,256	0/1:12,0:12:15.99:16,0,23	0/0:14,0:15:17.17:0,17,133	0/0:23,0:24:40.40:0,40,531	1/1:2,22:24:65.90:542,66,0	0/0:20,0:20:51.12:0,51,537	0/0:23,1:25:32.29:0,32,511	1/1:3,15:19:46.97:374,47,0	0/0:21,0:21:48.08:0,48,495	0/0:19,1:20:29.47:0,29,500	1/1:2,18:20:47.94:394,48,0	0/0:1,0:17:39.87:0,40,200	0/0:2,0:22:54.26:0,54,282	0/0:17,0:17:42.10:0,42,441	0/0:14,0:14:42.11:0,42,448	0/0:22,0:22:57.02:0,57,583	0/0:14,0:16:39.08:0,39,404	0/0:19,0:20:26.38:0,26,456	0/0:18,0:18:51.09:0,51,517	0/0:14,0:14:33.07:0,33,345	1/1:1,14:15:35.91:290,36,0	1/1:2,21:23:50.40:418,50,0	1/1:2,12:14:26.97:222,27,0	0/0:31,0:31:87.19:0,87,908	0/0:17,0:17:42.06:0,42,430	0/0:21,2:23:16.75:0,17,572	0/0:10,0:10:30.08:0,30,320
chr10	81294571	.	GAC	G	419.94	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.007;DP=680;FS=0.000;HRun=0;HaplotypeScore=79.3508;InbreedingCoeff=0.9997;MQ=67.68;MQ0=0;MQRankSum=-2.687;QD=32.30;ReadPosRankSum=-0.866;VQSLOD=4.9878;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,147,2786	0/0:13,0:13:36.12:0,36,694	0/0:21,0:21:55.18:0,55,1121	0/0:25,0:25:72.25:0,72,1360	0/0:22,0:22:66.23:0,66,1273	0/0:28,0:28:81.26:0,81,1508	1/1:1,12:13:36.12:515,36,0	0/0:31,0:31:90.29:0,90,1679	0/0:20,0:20:60.21:0,60,1133	0/0:34,0:34:99:0,102,1949	0/0:28,0:28:78.25:0,78,1470	0/0:20,0:20:60.21:0,60,1141	0/0:22,0:22:66.21:0,66,1236	0/0:31,0:31:93.30:0,93,1761	0/0:25,0:25:75.24:0,75,1415	0/0:23,0:23:69.22:0,69,1288	0/0:34,0:34:96.25:0,96,1746	0/0:28,0:28:75.26:0,75,1444	0/0:24,0:24:69.23:0,69,1275	0/0:22,0:22:66.23:0,66,1266	0/0:35,0:35:99:0,105,2018	0/0:22,0:22:60.18:0,60,1123	0/0:17,0:17:51.17:0,51,985	0/0:21,0:21:63.22:0,63,1217	0/0:19,0:19:57.18:0,57,1068	0/0:21,0:21:63.20:0,63,1184	0/0:17,0:17:51.17:0,51,984	0/0:15,0:15:42.14:0,42,811
chr10	81295202	.	C	CCT	1802.37	PASS	AB=0.899;AC=41;AF=0.820;AN=50;BaseQRankSum=0.015;DP=478;FS=12.460;HRun=0;HaplotypeScore=71.7584;InbreedingCoeff=-0.0497;MQ=54.59;MQ0=29;MQRankSum=1.086;QD=4.17;ReadPosRankSum=0.949;VQSLOD=1.2382;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,14:24:12.04:170,12,0	0/0:5,0:5:4.72:0,5,31	./.	./.	1/1:25,0:24:3.01:49,3,0	1/1:9,17:27:2.97:49,3,0	0/1:10,0:9:0.91:1,0,185	0/1:34,0:24:70.59:195,0,71	0/1:8,13:21:20.82:181,0,21	1/1:28,0:27:2.44:87,2,0	1/1:12,0:11:2.80:13,3,0	1/1:11,0:9:3:27,3,0	1/1:14,2:15:8.59:63,9,0	0/1:11,10:21:21.75:143,0,22	1/1:19,0:19:6.89:74,7,0	1/1:11,0:10:8.46:120,8,0	1/1:13,0:11:6.45:68,6,0	1/1:14,0:11:7.58:95,8,0	0/1:18,0:15:5.27:126,0,5	1/1:24,0:21:5.98:94,6,0	0/1:14,0:12:1.45:19,0,1	./.	1/1:18,1:19:8.84:97,9,0	1/1:6,3:9:6.02:98,6,0	1/1:19,0:18:9.05:45,9,0	0/1:22,0:17:9.43:31,0,9	1/1:11,0:9:5.05:53,5,0	1/1:9,0:4:5.56:30,6,0
chr10	81295230	.	TCC	T	2896.44	PASS	AB=0.885;AC=30;AF=0.577;AN=52;BaseQRankSum=2.876;DP=384;FS=12.703;HRun=3;HaplotypeScore=76.2032;InbreedingCoeff=0.6430;MQ=39.29;MQ0=58;MQRankSum=-2.131;QD=11.06;ReadPosRankSum=1.012;VQSLOD=-0.5567;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:17:22.13:0,22,337	0/0:7,0:7:9.01:0,9,95	./.	./.	1/1:10,1:10:15.87:126,16,0	0/0:25,0:22:20.93:0,21,224	0/1:13,0:12:20.58:21,0,226	0/1:27,6:18:19.35:286,0,19	0/0:11,0:11:21.23:0,21,184	1/1:18,3:17:36.44:402,36,0	1/1:10,1:9:17.86:149,18,0	0/0:8,0:6:8.76:0,9,88	0/0:12,0:11:11.58:0,12,243	0/1:14,0:13:3.91:4,0,172	1/1:9,1:9:5.25:137,5,0	1/1:5,6:9:17.06:162,17,0	1/1:14,2:15:20.66:197,21,0	1/1:13,2:10:20.87:175,21,0	1/1:12,3:9:26.94:272,27,0	1/1:18,2:16:23.93:212,24,0	0/1:5,4:5:23.25:58,0,23	0/0:16,0:12:18.93:0,19,267	0/0:9,0:6:11.99:0,12,159	0/0:7,0:7:12.03:0,12,152	1/1:6,6:12:15.70:240,16,0	1/1:7,17:18:39.15:365,39,0	1/1:15,1:13:19.44:165,19,0	1/1:11,0:7:12.01:125,12,0
chr10	81295260	.	TCACA	T	3179.99	PASS	AB=0.948;AC=21;AF=0.375;AN=56;BaseQRankSum=-3.239;DP=436;FS=3.006;HRun=0;HaplotypeScore=109.7068;InbreedingCoeff=0.1754;MQ=57.40;MQ0=16;MQRankSum=1.441;QD=11.95;ReadPosRankSum=-6.555;VQSLOD=1.0648;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:33.11:0,33,756	1/1:9,0:9:12.01:138,12,0	0/0:24,0:7:15.94:0,16,305	0/0:22,0:6:18.03:0,18,267	1/1:19,0:19:3.70:257,4,0	0/0:22,0:22:36.12:0,36,682	0/0:11,0:11:27.09:0,27,487	0/1:12,22:32:31.11:859,0,31	0/0:9,0:9:18.03:0,18,314	0/1:25,0:25:42.24:310,0,42	0/1:19,0:20:79.38:261,0,79	0/0:7,0:7:11.75:0,12,184	0/0:12,0:12:30.10:0,30,711	0/0:12,0:11:24.08:0,24,494	1/1:16,0:17:23.66:356,24,0	1/1:10,0:9:11.88:172,12,0	0/1:18,0:17:25.25:61,0,25	0/1:18,1:18:24.76:120,0,25	0/1:12,0:10:36.09:36,0,45	0/1:18,0:18:14.09:118,0,14	0/1:7,0:7:7.60:82,0,8	0/0:15,0:14:31.06:0,31,517	0/0:14,0:15:23.08:0,23,363	0/1:10,0:10:7.67:8,0,200	0/1:11,0:12:0.76:196,0,1	1/1:19,0:19:9.11:185,9,0	0/1:17,0:17:4.14:200,0,4	0/0:6,0:6:2.13:0,2,31
chr10	81295271	.	CACAT	C	983.32	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.012;DP=476;FS=7.277;HRun=0;HaplotypeScore=123.5198;InbreedingCoeff=-0.2024;MQ=58.08;MQ0=15;MQRankSum=1.087;QD=3.83;ReadPosRankSum=-3.547;VQSLOD=0.7412;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:39.59:0,40,939	1/1:2,8:10:12.04:207,12,0	0/0:38,0:9:26.44:0,26,449	0/0:26,0:10:6.83:0,7,325	0/1:23,0:23:63.78:64,0,267	0/0:21,0:21:45.13:0,45,1000	0/0:12,0:12:30.02:0,30,643	0/1:30,0:30:99:371,0,195	0/0:11,0:10:26.25:0,26,453	0/1:30,0:30:44.07:44,0,409	0/1:22,0:22:86:86,0,299	0/0:7,0:7:18.01:0,18,257	0/0:15,0:15:39.10:0,39,887	0/0:12,0:12:26.91:0,27,619	0/1:22,0:22:97.89:98,0,250	0/1:12,0:11:53.32:53,0,56	0/1:12,0:11:4.95:5,0,112	0/1:17,0:16:32.04:32,0,214	0/0:11,0:10:5.09:0,5,215	0/1:17,0:17:11.86:12,0,227	0/1:6,0:6:32.96:33,0,56	0/0:15,0:15:42.10:0,42,831	0/0:17,0:17:47.89:0,48,721	0/0:10,0:10:18.50:0,18,344	0/1:13,0:13:50.45:50,0,107	0/1:24,0:24:45.65:46,0,235	0/1:19,0:19:41.91:42,0,147	0/0:6,0:6:8.92:0,9,100
chr10	81295697	.	GAT	G	11549.10	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.959;DP=457;FS=0.000;HRun=0;HaplotypeScore=109.7810;InbreedingCoeff=0.8968;MQ=85.27;MQ0=0;MQRankSum=-5.378;QD=27.43;ReadPosRankSum=2.696;VQSLOD=5.7857;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,2:4:6.02:78,6,0	0/0:6,0:6:18.06:0,18,299	0/0:15,0:15:18.03:0,18,248	0/0:15,0:15:17.54:0,18,229	1/1:2,18:20:39.04:480,39,0	1/1:0,22:22:48.16:622,48,0	1/1:2,9:11:24.08:311,24,0	1/1:7,29:36:87.20:1033,87,0	1/1:2,14:16:24.08:308,24,0	1/1:4,18:22:54.09:651,54,0	1/1:6,28:34:69.22:887,69,0	1/1:1,19:20:39.12:499,39,0	1/1:2,9:11:21.07:273,21,0	1/1:5,15:20:27.09:351,27,0	1/1:3,17:20:39.13:506,39,0	1/1:2,14:16:39.13:505,39,0	1/1:0,7:7:12.04:156,12,0	1/1:0,6:6:12.04:152,12,0	1/1:0,14:14:42.11:518,42,0	1/1:1,25:26:72.23:931,72,0	1/1:0,5:5:12.04:156,12,0	1/1:1,13:14:33.11:424,33,0	1/1:5,26:31:62.96:807,63,0	1/1:1,4:5:9.03:113,9,0	1/1:1,9:10:21.07:273,21,0	1/1:2,17:19:51.17:659,51,0	1/1:4,22:26:51.17:662,51,0	1/1:1,5:6:15.05:195,15,0
chr10	81296370	.	CCTCTCTCTCTCTCTCT	C	3708.40	PASS	AB=0.784;AC=26;AF=0.520;AN=50;BaseQRankSum=1.055;DP=505;FS=9.234;HRun=0;HaplotypeScore=224.0125;InbreedingCoeff=0.5265;MQ=67.45;MQ0=17;MQRankSum=-2.498;QD=16.78;ReadPosRankSum=0.930;VQSLOD=1.1150;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:9,0:9:15.52:0,16,910	0/0:24,0:12:5.23:0,5,129	0/0:35,0:25:12.03:0,12,284	1/1:10,0:11:3:25,3,0	0/0:26,0:26:39.13:0,39,1519	0/1:9,0:17:0:0,0,0	1/1:12,2:12:6.02:128,6,0	0/0:23,0:24:36.99:0,37,1221	1/1:17,4:21:31.30:879,31,0	1/1:13,0:14:6.02:218,6,0	0/0:27,0:26:41.64:0,42,1423	1/1:11,0:16:6.91:243,7,0	1/1:9,0:18:5.95:148,6,0	1/1:16,3:20:6.02:229,6,0	1/1:11,1:15:9.03:302,9,0	0/1:6,1:7:6.97:107,0,7	1/1:7,0:6:3.01:93,3,0	0/1:9,3:10:51.52:207,0,52	./.	0/0:17,6:22:3.01:0,3,227	0/0:18,0:19:34:0,34,1237	0/0:17,0:15:30.09:0,30,954	0/0:29,0:28:43.19:0,43,2038	./.	1/1:11,6:19:18.04:433,18,0	0/1:13,4:18:23.75:565,0,24	1/1:8,2:9:3.01:131,3,0
chr10	81296540	.	C	CATGA	12347.47	PASS	AB=0.635;AC=27;AF=0.482;AN=56;BaseQRankSum=-11.953;DP=710;FS=14.949;HRun=0;HaplotypeScore=151.9385;InbreedingCoeff=0.7771;MQ=72.76;MQ0=0;MQRankSum=-2.018;QD=35.48;ReadPosRankSum=0.652;VQSLOD=4.3971;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:57.19:0,57,908	0/0:12,0:12:27.09:0,27,448	0/0:22,0:22:24.07:0,24,342	0/0:22,0:22:17.94:0,18,355	0/1:10,14:24:14.09:725,0,14	0/0:41,0:40:90.30:0,90,1462	0/0:19,0:19:27.04:0,27,396	1/1:18,8:27:36.07:606,36,0	0/0:25,0:25:39.10:0,39,577	1/1:9,18:27:60.21:1405,60,0	0/1:13,19:35:52.09:951,0,52	0/0:35,0:35:75.25:0,75,1220	0/0:28,0:28:63.19:0,63,966	0/0:31,0:31:75.12:0,75,1079	1/1:11,22:33:45.12:1058,45,0	1/1:7,9:16:18.06:445,18,0	1/1:2,7:8:18.06:445,18,0	1/1:1,10:13:18.06:445,18,0	1/1:5,4:9:12.04:267,12,0	1/1:9,25:36:72.10:1463,72,0	0/1:12,13:25:14.05:780,0,14	0/0:33,0:33:87.28:0,87,1397	0/0:33,0:33:66.21:0,66,1071	0/0:35,0:35:69.22:0,69,1094	1/1:6,12:19:24.08:593,24,0	1/1:14,25:39:81.23:1775,81,0	1/1:6,24:29:45.15:1111,45,0	1/1:3,3:6:12.04:278,12,0
chr10	81296991	.	C	CA	421.54	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.963;DP=591;FS=0.000;HRun=0;HaplotypeScore=59.7686;InbreedingCoeff=0.9965;MQ=86.02;MQ0=0;MQRankSum=-2.304;QD=28.10;ReadPosRankSum=-0.562;VQSLOD=3.6244;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.07:0,69,947	0/0:9,0:9:24.07:0,24,319	0/0:20,0:20:60.17:0,60,794	0/0:24,0:24:69.17:0,69,909	0/0:31,0:31:84.27:0,84,1156	0/0:21,0:21:63.21:0,63,881	1/1:1,14:15:33.11:516,33,0	0/0:37,0:37:99:0,111,1492	0/0:16,0:16:48.15:0,48,654	0/0:25,0:25:75.25:0,75,1048	0/0:32,0:32:93.28:0,93,1261	0/0:12,0:12:36.12:0,36,503	0/0:17,0:17:51.16:0,51,695	0/0:17,0:17:51.16:0,51,695	0/0:18,0:17:51.15:0,51,681	0/0:16,0:16:48.14:0,48,637	0/0:23,0:23:69.15:0,69,906	0/0:16,0:16:48.16:0,48,669	0/0:16,0:16:45.15:0,45,629	0/0:36,0:36:99:0,108,1450	0/0:16,0:16:48.16:0,48,667	0/0:17,0:17:51.16:0,51,695	0/0:24,0:24:72.23:0,72,990	0/0:17,0:17:42.14:0,42,587	0/0:22,0:22:66.19:0,66,874	0/0:28,0:28:78.26:0,78,1090	0/0:31,0:31:93.24:0,93,1274	0/0:9,0:9:27.09:0,27,377
chr10	81298455	.	AG	A	2194.39	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.658;DP=603;FS=0.000;HRun=2;HaplotypeScore=61.7909;InbreedingCoeff=0.9988;MQ=79.64;MQ0=0;MQRankSum=-4.346;QD=34.83;ReadPosRankSum=2.457;VQSLOD=4.0250;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:51.17:662,51,0	0/0:11,0:11:33.11:0,33,495	0/0:18,0:18:51.15:0,51,728	0/0:15,1:16:45.14:0,45,624	0/0:30,0:30:90.30:0,90,1347	0/0:30,0:30:87.24:0,87,1254	0/0:22,0:22:54.82:0,55,849	0/0:28,0:28:81.27:0,81,1196	0/0:17,0:17:48.15:0,48,699	0/0:35,0:35:99:0,105,1557	0/0:26,0:26:78.26:0,78,1169	0/0:26,0:26:78.26:0,78,1167	1/1:0,21:21:63.20:818,63,0	1/1:0,24:24:66.21:857,66,0	0/0:22,0:22:63.21:0,63,944	0/0:20,0:20:60.20:0,60,899	0/0:14,0:14:42.14:0,42,629	0/0:8,0:8:24.08:0,24,359	0/0:24,0:24:72.24:0,72,1078	0/0:24,0:24:69.22:0,69,1014	0/0:24,0:24:66.21:0,66,969	0/0:30,0:30:90.30:0,90,1346	0/0:10,0:10:30.10:0,30,449	0/0:15,0:15:45.14:0,45,655	0/0:15,0:15:45.15:0,45,674	0/0:23,0:23:66.22:0,66,988	0/0:42,0:42:99:0,123,1843	0/0:10,0:10:30.08:0,30,429
chr10	81298489	.	ACT	A	656.15	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.453;DP=610;FS=22.910;HRun=0;HaplotypeScore=77.8413;InbreedingCoeff=0.9984;MQ=82.94;MQ0=0;MQRankSum=-0.489;QD=31.25;ReadPosRankSum=0.649;VQSLOD=2.9893;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:51.17:0,51,955	0/0:11,0:11:33.11:0,33,601	0/0:19,0:19:51.15:0,51,876	0/0:24,0:24:65.63:0,66,1083	0/0:32,0:32:96.33:0,96,1797	0/0:36,0:36:99:0,108,1963	1/1:1,20:21:51.17:751,51,0	0/0:33,0:33:99:0,99,1770	0/0:18,0:18:51.17:0,51,955	0/0:26,0:26:78.27:0,78,1459	0/0:32,0:32:96.33:0,96,1789	0/0:21,0:21:57.16:0,57,1025	0/0:27,0:27:81.25:0,81,1446	0/0:25,0:25:69.24:0,69,1275	0/0:19,0:19:54.17:0,54,980	0/0:14,0:14:39.12:0,39,699	0/0:18,0:18:51.17:0,51,951	0/0:13,0:13:36.10:0,36,615	0/0:23,0:23:69.23:0,69,1265	0/0:30,0:30:87.28:0,87,1596	0/0:25,0:25:75.26:0,75,1405	0/0:23,0:23:66.21:0,66,1198	0/0:15,0:15:45.14:0,45,811	0/0:11,0:11:30.09:0,30,530	0/0:10,0:10:30.10:0,30,562	0/0:20,0:20:60.18:0,60,1032	0/0:31,0:31:90.29:0,90,1645	0/0:12,0:12:36.12:0,36,674
chr10	81298821	.	G	GA	9941.55	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-4.491;DP=535;FS=4.383;HRun=9;HaplotypeScore=78.6997;InbreedingCoeff=0.9197;MQ=82.14;MQ0=0;MQRankSum=-1.142;QD=26.44;ReadPosRankSum=1.444;VQSLOD=5.1975;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:16:41.02:0,41,343	0/0:11,0:11:29.99:0,30,260	0/0:19,1:20:23.60:0,24,258	0/1:9,0:11:14.94:15,0,90	1/1:3,27:30:74.51:791,75,0	0/0:21,0:21:59.97:0,60,517	0/0:12,0:12:32.97:0,33,282	1/1:2,37:41:93.91:1220,94,0	0/0:12,0:12:32.97:0,33,281	1/1:4,23:27:46.12:722,46,0	1/1:3,19:22:54.15:597,54,0	0/0:15,0:15:38.99:0,39,339	1/1:2,13:15:14.27:373,14,0	1/1:3,13:17:19.03:425,19,0	1/1:1,15:16:42.11:465,42,0	1/1:1,19:20:57.15:630,57,0	1/1:0,12:13:35.93:379,36,0	1/1:2,14:16:29.70:331,30,0	1/1:2,16:18:45.12:492,45,0	1/1:5,26:32:51.95:771,52,0	1/1:3,12:17:38.77:392,39,0	0/0:22,0:22:50.97:0,51,443	0/0:17,0:17:44.99:0,45,391	0/0:12,0:13:35.03:0,35,292	1/1:1,22:23:60.16:664,60,0	1/1:1,25:27:78:821,78,0	1/1:3,23:26:63.15:687,63,0	1/1:0,5:5:15.04:166,15,0
chr10	81298954	.	GCAGA	G	5890.22	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-6.115;DP=531;FS=4.337;HRun=0;HaplotypeScore=151.8796;InbreedingCoeff=0.9911;MQ=83.28;MQ0=0;MQRankSum=-3.978;QD=40.07;ReadPosRankSum=4.634;VQSLOD=5.1605;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:42.10:776,42,0	0/0:5,0:5:15.05:0,15,411	0/0:20,0:20:57.16:0,57,1453	0/0:19,0:18:45.01:0,45,1118	0/0:29,0:29:87.28:0,87,2326	1/1:1,15:16:39.13:756,39,0	0/0:10,0:10:30.09:0,30,717	0/0:29,0:29:78.14:0,78,1923	1/1:0,17:17:36.12:697,36,0	0/0:22,0:22:63.18:0,63,1611	0/0:28,0:28:84.27:0,84,2243	1/1:2,12:14:21.07:407,21,0	1/1:0,18:18:45.15:871,45,0	1/1:2,11:13:12.04:230,12,0	0/0:21,0:21:57.20:0,57,1561	0/0:13,0:13:39.13:0,39,1068	0/0:15,0:15:42.14:0,42,1108	0/0:10,0:10:27.09:0,27,739	0/0:20,0:20:57.20:0,57,1556	0/0:32,0:32:93.32:0,93,2547	0/0:22,0:21:63.20:0,63,1667	1/1:0,15:15:36.12:698,36,0	1/1:0,20:20:51.17:989,51,0	1/1:3,12:15:24.55:466,25,0	0/0:15,0:15:45.15:0,45,1182	0/0:27,0:27:78.24:0,78,2015	0/0:38,0:37:99:0,111,2912	0/0:9,0:9:24.08:0,24,657
chr10	81299060	.	TG	T	6337.07	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=9.222;DP=462;FS=0.416;HRun=2;HaplotypeScore=133.1383;InbreedingCoeff=0.5396;MQ=68.62;MQ0=2;MQRankSum=-2.199;QD=16.37;ReadPosRankSum=-1.845;VQSLOD=4.2025;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:22.68:0,23,127	0/0:13,0:13:39.10:0,39,554	0/0:20,0:8:12.34:0,12,92	0/0:11,0:8:14.95:0,15,160	1/1:4,20:24:55.59:486,56,0	0/1:15,0:15:16.07:16,0,78	1/1:3,0:3:6.01:18,6,0	1/1:16,11:27:64.42:501,64,0	0/1:20,0:20:42.86:43,0,74	1/1:1,18:19:54.02:484,54,0	1/1:1,23:24:59.73:533,60,0	0/0:12,0:12:16.96:0,17,70	1/1:0,11:11:30.01:269,30,0	1/1:2,14:16:16.54:129,17,0	1/1:0,23:23:47.99:429,48,0	1/1:1,9:10:21.01:192,21,0	1/1:8,7:15:23.01:263,23,0	1/1:1,19:20:44.77:407,45,0	1/1:7,12:19:39.29:413,39,0	1/1:5,16:21:56.91:475,57,0	1/1:0,4:4:9:79,9,0	0/1:13,0:13:3.69:4,0,89	0/1:23,0:23:16.58:17,0,83	0/1:7,0:7:19.85:29,0,20	1/1:2,19:21:52.71:450,53,0	1/1:9,13:21:58.49:502,58,0	1/1:1,21:22:57.04:517,57,0	1/1:5,3:8:9.48:82,9,0
chr10	81299070	.	TAA	T	4225.82	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=11.599;DP=451;FS=0.000;HRun=8;HaplotypeScore=148.9290;InbreedingCoeff=0.8979;MQ=64.97;MQ0=2;MQRankSum=-3.998;QD=14.42;ReadPosRankSum=1.532;VQSLOD=1.7053;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.13:0,48,740	0/0:13,0:13:33.09:0,33,497	0/0:21,0:9:13.59:0,14,169	0/0:10,0:5:8.66:0,9,59	1/1:22,2:24:47.31:352,47,0	0/0:15,0:15:40.25:0,40,410	0/0:3,0:3:8.70:0,9,49	1/1:22,2:25:29.38:316,29,0	0/0:19,0:19:47.92:0,48,476	1/1:18,0:18:46.81:318,47,0	1/1:21,2:23:44.56:341,45,0	0/0:11,0:11:30.06:0,30,297	1/1:12,0:12:31.35:176,31,0	1/1:15,0:15:7.38:112,7,0	1/1:22,1:23:47.40:281,47,0	1/1:7,0:7:19.63:100,20,0	1/1:11,0:11:2.75:91,3,0	1/1:22,0:22:48.82:326,49,0	1/1:17,1:18:36.82:250,37,0	1/1:19,1:20:49.73:331,50,0	1/1:3,0:3:8.18:36,8,0	0/0:13,0:13:32.75:0,33,328	0/0:28,0:28:56.56:0,57,562	0/0:7,0:7:13.39:0,13,113	1/1:19,1:20:55.03:343,55,0	1/1:22,1:22:42.09:404,42,0	1/1:20,1:21:58.25:369,58,0	1/1:7,1:8:1.65:79,2,0
chr10	81300067	.	GCA	G	6749.38	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=8.451;DP=664;FS=1.630;HRun=0;HaplotypeScore=218.9616;InbreedingCoeff=0.9322;MQ=60.35;MQ0=5;MQRankSum=-6.175;QD=18.96;ReadPosRankSum=0.961;VQSLOD=5.1049;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:79.28:0,79,1283	0/0:11,0:11:33.10:0,33,522	0/0:27,0:8:5.99:0,6,68	0/0:31,0:12:2.44:0,2,146	1/1:6,23:29:24.07:303,24,0	0/0:19,0:19:36.11:0,36,569	1/1:6,22:28:26.37:340,26,0	1/1:5,18:23:51.14:617,51,0	0/0:25,0:25:63.22:0,63,1040	1/1:7,30:38:93.13:1149,93,0	1/1:4,10:15:5.99:61,6,0	0/0:27,1:28:34.38:0,34,1105	0/0:25,0:25:75.26:0,75,1243	0/0:31,1:32:49.40:0,49,1322	1/1:4,17:22:27.01:340,27,0	1/1:3,16:19:23.94:303,24,0	1/1:3,14:18:23.89:279,24,0	1/1:2,6:8:20.43:235,20,0	1/1:8,12:20:39.10:476,39,0	1/1:7,21:28:26.98:341,27,0	1/1:13,22:35:21.04:261,21,0	0/0:23,0:23:63.20:0,63,1022	0/0:26,1:27:48.16:0,48,791	0/0:26,1:27:22.34:0,22,910	1/1:3,10:14:11.93:151,12,0	1/1:6,24:31:31.19:910,31,0	1/1:4,20:24:66.21:832,66,0	1/1:0,4:4:12.04:151,12,0
chr10	81300091	.	GCACCCA	G	8028.69	PASS	AB=0.779;AC=30;AF=0.556;AN=54;BaseQRankSum=8.743;DP=646;FS=9.988;HRun=0;HaplotypeScore=257.4367;InbreedingCoeff=0.8380;MQ=46.01;MQ0=6;MQRankSum=-10.727;QD=22.49;ReadPosRankSum=-1.217;VQSLOD=2.9212;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,2879	0/0:7,0:7:21.07:0,21,614	0/0:32,0:9:24.02:0,24,429	0/1:32,0:10:1.75:2,0,234	1/1:10,18:28:17.96:146,18,0	0/0:20,0:20:51.05:0,51,1358	1/1:14,2:28:10.70:240,11,0	1/1:10,10:19:53.88:833,54,0	0/0:22,0:22:51.16:0,51,1363	1/1:8,22:33:90.14:1753,90,0	./.	0/0:28,0:28:81.17:0,81,2098	0/0:25,0:25:75.19:0,75,2031	0/0:29,0:29:81.26:0,81,2498	1/1:5,16:21:21.03:420,21,0	1/1:5,12:17:20.64:343,21,0	1/1:7,9:16:15.02:261,15,0	1/1:5,3:8:17.98:305,18,0	1/1:6,9:16:38.39:581,38,0	1/1:5,17:23:20.55:269,21,0	1/1:15,20:36:11.90:100,12,0	0/0:28,0:28:72.21:0,72,1738	0/0:20,0:20:42.04:0,42,985	0/0:24,0:24:60.08:0,60,1373	1/1:5,19:24:2.60:25,3,0	0/1:6,20:29:10.91:1541,0,11	1/1:5,14:20:45.11:930,45,0	1/1:1,4:5:12.04:281,12,0
chr10	81300095	.	C	CCA	5252.52	PASS	AB=0.706;AC=12;AF=0.231;AN=52;BaseQRankSum=-6.072;DP=640;FS=3.409;HRun=0;HaplotypeScore=229.4936;InbreedingCoeff=0.5055;MQ=46.58;MQ0=4;MQRankSum=9.179;QD=24.09;ReadPosRankSum=-0.322;VQSLOD=5.0966;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,33:45:53.87:1361,54,0	0/0:5,0:7:20.73:0,21,209	0/0:31,0:9:14.70:0,15,147	0/0:29,0:10:2.56:0,3,15	0/1:26,0:26:0.09:0,0,0	0/1:8,15:24:99:436,0,136	0/0:29,0:29:15.39:0,15,76	0/0:19,0:18:24.94:0,25,115	0/1:8,14:22:99:485,0,99	0/0:30,0:30:58.50:0,59,274	./.	0/1:10,17:27:2.99:935,0,3	0/0:26,0:28:53.81:0,54,596	0/0:28,0:28:65.78:0,66,756	0/0:20,0:20:4.83:0,5,11	0/0:17,0:17:3.06:0,3,8	0/0:15,0:15:8.52:0,9,42	0/0:8,0:8:5.35:0,5,27	0/0:15,0:14:19.67:0,20,94	0/0:23,0:23:2.13:0,2,5	0/0:33,0:33:3:0,3,27	1/1:7,21:29:54.18:867,54,0	1/1:6,15:21:30.10:472,30,0	1/1:11,13:24:44.87:696,45,0	./.	0/0:29,0:29:40.62:0,41,250	0/0:17,0:17:30.33:0,30,148	0/0:4,0:4:1.87:0,2,33
chr10	81300446	.	TC	T	10080.06	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=17.751;DP=562;FS=8.746;HRun=3;HaplotypeScore=108.7297;InbreedingCoeff=0.9991;MQ=57.98;MQ0=1;MQRankSum=-3.534;QD=34.05;ReadPosRankSum=1.230;VQSLOD=4.2841;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.23:0,84,1166	0/0:11,0:11:33.11:0,33,475	0/0:30,0:27:74.03:0,74,874	0/0:30,0:26:64.42:0,64,913	1/1:1,12:13:33.09:395,33,0	0/0:25,0:25:75.25:0,75,1079	1/1:0,18:18:54.06:644,54,0	1/1:2,27:29:78.22:941,78,0	0/0:19,0:19:57.19:0,57,820	1/1:0,17:17:48.14:582,48,0	1/1:1,23:24:63.20:779,63,0	0/0:18,0:18:48.15:0,48,672	0/0:19,0:19:57.18:0,57,797	0/0:23,0:23:69.23:0,69,992	1/1:0,15:15:45.14:557,45,0	1/1:0,17:17:51.16:630,51,0	1/1:2,11:12:30.09:371,30,0	1/1:1,18:19:57.16:692,57,0	1/1:0,16:16:48.15:594,48,0	1/1:0,31:31:90.17:1074,90,0	1/1:0,11:11:27.08:334,27,0	0/0:27,0:27:81.26:0,81,1137	0/0:20,0:20:60.19:0,60,836	0/0:15,0:15:45.14:0,45,629	1/1:1,23:24:69.17:836,69,0	1/1:1,20:20:54.12:645,54,0	1/1:0,21:21:63.20:780,63,0	1/1:0,7:7:20.98:225,21,0
chr10	81300524	.	T	TC	12175.12	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-6.205;DP=579;FS=2.251;HRun=3;HaplotypeScore=70.5896;InbreedingCoeff=0.9983;MQ=57.10;MQ0=0;MQRankSum=-3.485;QD=38.65;ReadPosRankSum=1.332;VQSLOD=5.0804;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1498	0/0:11,0:11:30.10:0,30,388	0/0:32,0:29:84.25:0,84,1049	0/0:28,0:21:60.15:0,60,734	1/1:1,19:20:42.10:604,42,0	0/0:16,0:16:48.16:0,48,619	1/1:0,24:24:63.21:944,63,0	1/1:3,26:28:78.15:1050,78,0	0/0:12,0:12:36.12:0,36,468	1/1:0,29:29:84.28:1257,84,0	1/1:3,13:16:36.11:521,36,0	0/0:22,0:22:63.20:0,63,817	0/0:17,0:17:51.17:0,51,662	0/0:20,0:20:60.18:0,60,764	1/1:2,19:20:51.17:764,51,0	1/1:2,7:9:27.08:384,27,0	1/1:1,19:20:55.12:850,55,0	1/1:3,17:20:48.16:719,48,0	1/1:0,8:7:18.04:244,18,0	1/1:3,24:27:75.21:1098,75,0	1/1:2,20:22:66.20:950,66,0	0/0:20,0:20:57.19:0,57,739	0/0:19,0:19:57.18:0,57,733	0/0:28,0:28:84.27:0,84,1090	1/1:1,21:22:54.14:784,54,0	1/1:2,17:19:54.18:796,54,0	1/1:2,18:20:60.19:875,60,0	1/1:2,7:9:24.05:336,24,0
chr10	81301332	.	ATTCT	A	13378.72	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=18.746;DP=571;FS=12.140;HRun=0;HaplotypeScore=153.8017;InbreedingCoeff=0.9939;MQ=87.98;MQ0=0;MQRankSum=-18.323;QD=46.13;ReadPosRankSum=0.335;VQSLOD=5.2382;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.21:0,69,1689	0/0:16,0:16:48.16:0,48,1280	0/0:25,0:26:65.98:0,66,1608	0/0:28,0:28:69.24:0,69,1713	1/1:0,21:21:51.17:947,51,0	0/0:40,0:40:99:0,108,2737	1/1:2,11:13:30.10:555,30,0	1/1:6,30:36:87.26:1531,87,0	0/0:24,0:24:72.25:0,72,1912	1/1:2,21:23:63.22:1175,63,0	1/1:0,14:14:36.12:671,36,0	0/0:12,0:12:36.12:0,36,879	0/0:29,0:29:81.26:0,81,2105	0/0:23,0:23:66.23:0,66,1737	1/1:0,18:18:45.15:819,45,0	1/1:1,13:14:39.13:727,39,0	1/1:0,9:9:24.08:447,24,0	1/1:2,6:8:18.06:335,18,0	1/1:3,16:19:48.16:895,48,0	1/1:2,20:22:54.19:1001,54,0	1/1:2,10:12:24.08:408,24,0	0/0:20,0:20:57.20:0,57,1493	0/0:25,0:25:75.26:0,75,2001	0/0:12,0:12:36.12:0,36,955	1/1:1,13:14:36.12:660,36,0	1/1:3,24:27:72.23:1310,72,0	1/1:2,30:32:90.31:1678,90,0	1/1:3,5:8:12.04:218,12,0
chr10	81301710	.	G	GGCGCGCGCGC	3170.13	PASS	AB=1.000;AC=20;AF=0.370;AN=54;BaseQRankSum=3.135;DP=418;FS=8.783;HRun=0;HaplotypeScore=173.5846;InbreedingCoeff=0.6155;MQ=68.07;MQ0=17;MQRankSum=-8.159;QD=18.87;ReadPosRankSum=-2.271;VQSLOD=1.9240;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:33.58:0,34,1058	0/0:4,0:4:12.04:0,12,377	0/0:28,0:20:44.91:0,45,1248	0/0:25,0:16:39.58:0,40,942	0/1:19,0:19:16.46:59,0,16	0/0:17,0:17:36.12:0,36,1127	0/0:11,0:11:27.09:0,27,819	0/1:14,0:13:65.28:457,0,65	0/0:21,0:21:51.15:0,51,1463	1/1:23,0:20:35.18:775,35,0	0/0:9,0:9:2.04:0,2,6	0/0:14,0:13:30.10:0,30,929	0/0:14,0:14:39.12:0,39,1106	0/0:14,0:14:30.10:0,30,876	0/1:12,0:11:0.17:26,0,0	0/1:5,0:5:22.74:42,0,23	1/1:12,0:12:16.67:390,17,0	1/1:10,0:9:13.19:214,13,0	1/1:13,0:11:9.94:144,10,0	0/0:8,0:8:2.45:0,2,9	./.	0/0:13,0:12:21.06:0,21,585	0/0:18,0:17:39.10:0,39,1050	0/0:21,0:20:33.56:0,34,951	1/1:18,0:18:5.51:91,6,0	1/1:23,0:23:18.23:807,18,0	1/1:13,0:12:8.98:160,9,0	1/1:6,0:4:6.02:193,6,0
chr10	81301712	.	CGTGTGTGTGTGTGTGTGT	C	2973.91	PASS	AB=0.872;AC=27;AF=0.540;AN=50;BaseQRankSum=5.695;DP=408;FS=34.527;HRun=0;HaplotypeScore=194.8455;InbreedingCoeff=0.2552;MQ=65.82;MQ0=18;MQRankSum=-2.546;QD=12.82;ReadPosRankSum=-0.062;VQSLOD=1.3429;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:12.04:0,12,558	0/0:3,0:5:12.04:0,12,639	./.	./.	1/1:17,0:17:18.06:256,18,0	1/1:12,4:17:9.03:335,9,0	0/0:11,0:11:6.01:0,6,69	0/0:14,0:13:3.38:0,3,8	0/1:14,7:21:77.79:706,0,78	0/1:21,0:18:55.30:77,0,55	1/1:9,0:9:3.01:34,3,0	0/1:9,5:13:60.41:422,0,60	0/0:12,0:15:21.06:0,21,615	0/0:11,0:14:6.02:0,6,166	1/1:9,0:8:12.04:151,12,0	1/1:4,1:5:3.01:145,3,0	1/1:12,0:12:2.33:38,2,0	1/1:9,0:8:3.60:93,4,0	0/0:12,0:10:1.36:0,1,3	1/1:7,0:7:3.01:34,3,0	./.	1/1:11,1:12:6.02:233,6,0	1/1:12,4:16:6.02:209,6,0	0/1:18,3:19:87.61:281,0,88	1/1:19,0:19:3.01:37,3,0	0/1:21,0:21:59.10:80,0,59	0/0:11,0:10:0.47:0,0,1	0/0:6,0:4:7.26:0,7,85
chr10	81301756	.	TGTGTGTGTGTGA	T	4135.21	PASS	AB=1.000;AC=36;AF=0.667;AN=54;BaseQRankSum=6.795;DP=372;FS=1.983;HRun=0;HaplotypeScore=120.2435;InbreedingCoeff=0.3272;MQ=50.89;MQ0=23;MQRankSum=-4.707;QD=16.81;ReadPosRankSum=3.382;VQSLOD=2.4881;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:42.26:0,42,694	0/0:6,0:6:17.99:0,18,393	0/0:33,0:13:33.93:0,34,360	0/0:28,0:13:32.07:0,32,325	1/1:1,16:18:18.06:678,18,0	0/1:15,0:14:99:160,0,166	1/1:9,0:9:23.01:181,23,0	1/1:12,0:11:27.72:239,28,0	0/1:17,0:17:99:281,0,154	1/1:1,12:12:13.74:295,14,0	1/1:1,11:12:3.01:116,3,0	0/1:12,0:12:99:171,0,111	0/0:11,0:9:14.28:0,14,104	0/0:15,0:15:33.92:0,34,347	1/1:1,9:9:12.04:466,12,0	1/1:7,0:6:3.08:83,3,0	1/1:0,7:7:3.01:116,3,0	1/1:1,3:3:6.02:233,6,0	1/1:2,0:1:2.94:18,3,0	1/1:0,14:14:3.01:116,3,0	./.	0/1:22,0:22:63.26:63,0,278	0/1:15,0:14:81.55:82,0,151	0/1:16,0:14:93.82:94,0,201	1/1:0,9:9:3.01:116,3,0	1/1:2,17:18:22.81:473,23,0	1/1:7,0:6:11.93:93,12,0	1/1:6,0:3:8.92:62,9,0
chr10	81302415	.	AT	A	10236.53	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-2.658;DP=541;FS=1.118;HRun=5;HaplotypeScore=124.1865;InbreedingCoeff=0.9940;MQ=70.53;MQ0=0;MQRankSum=-3.407;QD=30.47;ReadPosRankSum=0.724;VQSLOD=3.5462;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:36.10:0,36,464	0/0:9,0:9:24.08:0,24,328	0/0:14,0:14:33.10:0,33,420	0/0:6,0:5:11.96:0,12,120	1/1:2,32:34:90.25:1018,90,0	0/0:22,0:22:57.19:0,57,779	0/0:16,0:16:39.13:0,39,532	1/1:2,30:32:87.25:987,87,0	0/0:19,0:19:51.15:0,51,666	1/1:3,22:25:66.19:748,66,0	1/1:1,24:25:72.21:817,72,0	0/0:11,0:11:27.09:0,27,368	0/0:19,0:19:45.14:0,45,594	0/0:30,0:30:75.24:0,75,1006	1/1:1,16:17:45.13:510,45,0	1/1:2,11:13:30.08:340,30,0	1/1:0,18:18:45.13:509,45,0	1/1:1,14:15:42.12:476,42,0	1/1:2,27:29:81.19:904,81,0	1/1:2,29:31:81.09:900,81,0	1/1:0,15:15:45.13:510,45,0	0/0:20,0:20:57.17:0,57,749	0/0:17,0:17:39.12:0,39,515	0/0:8,0:8:18.05:0,18,230	1/1:3,16:19:48.14:545,48,0	1/1:0,16:16:48.14:544,48,0	1/1:4,30:34:87.25:987,87,0	1/1:0,13:13:39.11:442,39,0
chr10	81302425	.	T	TTA	2642.65	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=-13.224;DP=524;FS=2.966;HRun=0;HaplotypeScore=157.5427;InbreedingCoeff=0.5686;MQ=65.71;MQ0=0;MQRankSum=0.651;QD=8.28;ReadPosRankSum=-2.535;VQSLOD=3.1464;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:42.72:222,43,0	0/0:7,0:7:20.66:0,21,285	0/0:10,0:10:27.05:0,27,335	0/1:7,0:6:11.38:11,0,105	0/1:33,0:33:31.99:32,0,224	1/1:22,0:22:53.97:273,54,0	1/1:2,16:18:39.12:675,39,0	0/1:33,0:33:87.86:88,0,121	1/1:18,0:18:45.45:230,45,0	0/0:22,0:22:6.18:0,6,115	0/0:26,0:26:12.62:0,13,169	1/1:12,0:12:28.41:143,28,0	1/1:16,0:16:39.83:204,40,0	1/1:25,0:25:59.61:301,60,0	0/0:14,0:14:34.16:0,34,138	0/0:13,0:13:6.71:0,7,85	0/0:18,0:18:16.10:0,16,124	0/0:15,0:15:37.01:0,37,152	0/1:27,0:27:79.93:135,0,80	0/0:34,0:34:35.36:0,35,280	0/1:15,0:15:10.48:10,0,87	1/1:19,0:19:54.14:278,54,0	1/1:17,0:17:34.02:173,34,0	1/1:7,0:7:14.20:72,14,0	0/0:18,0:18:40.68:0,41,160	0/0:15,0:15:7.36:0,7,80	0/1:32,0:32:0.10:0,0,208	0/0:13,0:13:35.15:0,35,152
chr10	81302426	.	T	TA	6028.74	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=-14.305;DP=524;FS=2.637;HRun=0;HaplotypeScore=133.7329;InbreedingCoeff=0.3883;MQ=64.95;MQ0=0;MQRankSum=-0.302;QD=15.46;ReadPosRankSum=-2.728;VQSLOD=5.5335;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:42.13:583,42,0	0/0:7,0:7:15.61:0,16,247	0/0:9,0:9:26.82:0,27,321	0/0:7,0:6:11.12:0,11,105	0/1:33,0:33:53.75:54,0,84	1/1:0,22:22:57.19:795,57,0	1/1:18,0:18:15.71:200,16,0	0/1:32,0:32:9.76:125,0,10	1/1:0,18:18:48.16:669,48,0	0/1:22,0:22:20.43:25,0,20	0/1:26,0:26:10.57:11,0,47	1/1:0,12:12:30.10:418,30,0	1/1:0,16:16:42.14:585,42,0	1/1:0,25:25:63.21:878,63,0	0/0:14,0:14:21.60:0,22,60	0/1:13,0:13:4.75:5,0,24	0/0:17,0:17:2.94:0,3,40	0/0:15,0:15:26.84:0,27,77	1/1:27,0:27:1.51:164,2,0	0/0:34,0:34:7.38:0,7,99	0/1:15,0:15:19.81:20,0,32	1/1:0,20:20:57.02:745,57,0	1/1:0,17:17:36.12:503,36,0	1/1:2,7:9:15.03:209,15,0	0/0:18,0:18:25.41:0,25,67	0/1:16,0:16:11.90:13,0,12	0/1:32,0:32:27.46:27,0,65	0/0:13,0:13:24.81:0,25,74
chr10	81302822	.	TA	T	22262.71	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=6.485;DP=717;FS=4.471;HRun=1;HaplotypeScore=122.5516;InbreedingCoeff=0.9990;MQ=68.55;MQ0=0;MQRankSum=-3.086;QD=39.75;ReadPosRankSum=2.322;VQSLOD=4.4879;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,2013	0/0:15,0:15:41.98:0,42,648	0/0:10,0:10:27.09:0,27,413	0/0:10,0:10:30.10:0,30,485	1/1:0,28:28:81.27:1125,81,0	1/1:0,22:22:60.20:839,60,0	0/0:29,0:29:87.30:0,87,1375	1/1:1,29:30:87.28:1190,87,0	1/1:0,31:31:87.29:1216,87,0	1/1:0,38:38:99:1572,114,0	1/1:0,19:19:54.18:749,54,0	1/1:0,20:20:54.18:755,54,0	0/0:30,0:30:81.26:0,81,1272	0/0:21,0:21:60.20:0,60,959	1/1:0,32:32:90.30:1259,90,0	1/1:0,23:23:66.22:923,66,0	1/1:0,47:47:99:1888,135,0	1/1:0,17:17:48.16:671,48,0	1/1:0,20:20:60.19:822,60,0	1/1:0,33:33:96.29:1315,96,0	1/1:0,42:42:99:1720,123,0	1/1:0,17:17:42.14:575,42,0	1/1:0,28:28:81.27:1132,81,0	1/1:0,29:29:81.24:1116,81,0	1/1:0,18:18:48.16:671,48,0	1/1:0,35:35:99:1425,105,0	1/1:0,24:24:72.24:1006,72,0	1/1:0,7:7:21.07:294,21,0
chr10	81302918	.	T	TA	20879.68	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-1.044;DP=768;FS=0.588;HRun=1;HaplotypeScore=155.1755;InbreedingCoeff=0.9942;MQ=71.10;MQ0=0;MQRankSum=-3.635;QD=40.31;ReadPosRankSum=3.814;VQSLOD=4.3389;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,47:48:99:1863,126,0	0/0:4,0:4:12.04:0,12,155	0/0:21,0:21:63.18:0,63,757	0/0:24,0:23:59.57:0,60,675	1/1:4,21:25:69.22:1013,69,0	0/0:21,0:21:57.19:0,57,740	0/0:30,0:30:84.27:0,84,1088	1/1:1,23:24:69.21:997,69,0	0/0:27,0:27:78.25:0,78,1013	1/1:1,30:31:90.25:1323,90,0	1/1:1,16:17:42.14:618,42,0	0/0:20,0:20:51.17:0,51,662	1/1:0,25:25:54.18:810,54,0	1/1:2,20:22:54.18:809,54,0	1/1:6,29:35:93.30:1373,93,0	1/1:1,19:20:51.17:764,51,0	1/1:5,56:61:99:2668,181,0	1/1:0,27:27:75.25:1124,75,0	1/1:1,23:24:66.11:862,66,0	1/1:0,29:29:87.23:1276,87,0	1/1:3,38:41:99:1780,123,0	0/0:30,0:30:87.26:0,87,1102	0/0:23,0:23:66.19:0,66,842	0/0:50,0:50:99:0,144,1849	1/1:4,19:23:60.14:871,60,0	1/1:1,29:30:87.29:1304,87,0	1/1:4,26:29:81.15:1154,81,0	1/1:0,6:6:18.06:270,18,0
chr10	81303667	.	T	TG	3207.68	PASS	AB=0.526;AC=25;AF=0.481;AN=52;BaseQRankSum=14.591;DP=351;FS=6.268;HRun=0;HaplotypeScore=143.2433;InbreedingCoeff=0.8897;MQ=99.31;MQ0=0;MQRankSum=-13.186;QD=28.14;ReadPosRankSum=5.459;VQSLOD=3.3128;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.25:0,75,1049	0/0:7,0:7:21.07:0,21,294	0/0:19,0:19:54.18:0,54,736	0/0:28,0:28:60.39:0,60,920	1/1:0,10:10:26.16:262,26,0	0/0:23,0:23:69.23:0,69,964	0/0:20,0:20:60.19:0,60,822	./.	0/0:27,0:27:81.26:0,81,1116	1/1:3,10:13:36.08:390,36,0	1/1:1,9:10:27.07:288,27,0	0/0:14,0:14:42.11:0,42,566	0/0:17,0:17:51.15:0,51,682	0/0:18,0:18:54.18:0,54,755	1/1:2,8:10:24.07:281,24,0	0/1:1,9:10:11.88:266,0,12	./.	1/1:0,5:5:12.04:142,12,0	1/1:3,5:8:18.01:196,18,0	1/1:1,8:9:27.08:313,27,0	1/1:0,1:1:3.01:33,3,0	0/0:16,0:16:48.15:0,48,656	0/0:18,0:18:51.17:0,51,713	0/0:5,0:5:15.05:0,15,209	1/1:0,9:9:27.07:301,27,0	1/1:1,13:14:39.11:445,39,0	1/1:2,7:9:27.06:305,27,0	1/1:3,3:6:15.05:197,15,0
chr10	81303670	.	A	AG	1074.94	PASS	AB=0.526;AC=25;AF=0.463;AN=54;BaseQRankSum=14.462;DP=349;FS=9.205;HRun=0;HaplotypeScore=145.7372;InbreedingCoeff=0.8174;MQ=98.34;MQ0=0;MQRankSum=-13.681;QD=9.68;ReadPosRankSum=6.745;VQSLOD=2.7707;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.24:0,78,1070	0/0:8,0:8:21.07:0,21,294	0/0:18,0:18:51.13:0,51,634	0/0:27,0:27:65.87:0,66,913	1/1:2,8:10:13.92:83,14,0	0/0:23,0:23:69.23:0,69,965	0/0:19,0:19:57.19:0,57,797	0/0:2,0:2:2.55:0,3,11	0/0:27,0:27:81.26:0,81,1117	1/1:1,10:11:30.91:151,31,0	1/1:2,8:10:25.65:113,26,0	0/0:14,0:14:42.13:0,42,567	0/0:15,0:15:45.15:0,45,629	0/0:20,0:20:60.17:0,60,805	1/1:4,7:11:17.12:123,17,0	0/1:1,9:10:14.43:82,0,14	./.	1/1:2,3:5:7.18:31,7,0	1/1:2,5:7:0.64:64,1,0	1/1:1,8:9:24.94:123,25,0	1/1:0,1:1:2.68:11,3,0	0/0:17,0:17:51.14:0,51,679	0/0:18,0:18:51.17:0,51,713	0/0:4,0:4:12.04:0,12,168	1/1:0,9:9:24.87:114,25,0	1/1:1,13:14:39.66:203,40,0	1/1:1,7:8:19.78:96,20,0	1/1:3,3:6:14.63:89,15,0
chr10	81303671	.	A	ATGGAGTGAGAAG	14758.18	PASS	AB=0.526;AC=27;AF=0.500;AN=54;BaseQRankSum=14.236;DP=352;FS=23.707;HRun=0;HaplotypeScore=164.2758;InbreedingCoeff=0.8627;MQ=98.12;MQ0=0;MQRankSum=-13.152;QD=128.33;ReadPosRankSum=6.221;VQSLOD=3.6126;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.21:0,78,2897	0/0:9,0:9:24.07:0,24,850	0/0:18,0:18:51.18:0,51,1713	0/0:27,0:27:73.46:0,73,2507	1/1:2,8:10:24.55:1070,25,0	0/0:23,0:23:69.24:0,69,2662	0/0:19,0:19:57.20:0,57,2108	1/1:4,0:4:5.97:52,6,0	0/0:26,0:26:78.27:0,78,2924	1/1:1,10:11:33.11:1654,33,0	1/1:1,7:11:30.10:1500,30,0	0/0:13,0:13:39.13:0,39,1503	0/0:15,0:15:45.15:0,45,1605	0/0:21,0:21:60.18:0,60,2170	1/1:4,7:11:27.55:1178,28,0	0/1:1,8:10:88.74:1395,0,89	./.	1/1:1,3:4:9.03:464,9,0	1/1:2,5:7:17.97:815,18,0	1/1:1,8:9:24.08:1276,24,0	1/1:0,1:1:3.01:158,3,0	0/0:17,0:17:48.16:0,48,1741	0/0:18,0:18:51.18:0,51,2017	0/0:4,0:4:12.04:0,12,475	1/1:0,9:9:27.09:1432,27,0	1/1:1,13:14:42.14:2144,42,0	1/1:1,7:8:24.07:1139,24,0	1/1:3,3:6:9.03:482,9,0
chr10	81304150	.	TAAGC	T	950.98	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.948;DP=537;FS=3.272;HRun=0;HaplotypeScore=88.1001;InbreedingCoeff=0.9905;MQ=77.81;MQ0=0;MQRankSum=-0.902;QD=39.62;ReadPosRankSum=2.819;VQSLOD=3.4777;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:54.19:1046,54,0	0/0:10,0:10:30.10:0,30,822	0/0:15,0:15:36.56:0,37,854	0/0:12,0:11:29.83:0,30,578	0/0:29,0:29:84.29:0,84,2290	0/0:20,0:20:60.21:0,60,1630	0/0:13,0:13:36.12:0,36,986	0/0:27,0:27:81.26:0,81,2081	0/0:19,0:19:57.18:0,57,1504	0/0:29,0:29:84.27:0,84,2147	0/0:26,0:26:75.23:0,75,1940	0/0:15,0:15:45.15:0,45,1230	0/0:17,0:17:51.18:0,51,1371	0/0:17,0:17:51.18:0,51,1392	0/0:22,0:22:66.23:0,66,1806	0/0:13,0:13:39.13:0,39,1068	0/0:22,0:22:60.21:0,60,1636	0/0:21,0:21:57.16:0,57,1437	0/0:15,0:15:45.15:0,45,1218	0/0:32,0:32:96.32:0,96,2573	0/0:15,0:15:45.14:0,45,1176	0/0:19,0:19:57.20:0,57,1560	0/0:17,0:17:48.16:0,48,1315	0/0:12,0:12:36.12:0,36,986	0/0:14,0:14:42.14:0,42,1090	0/0:26,0:26:78.27:0,78,2138	0/0:30,0:30:90.31:0,90,2438	0/0:6,0:6:18.06:0,18,493
chr10	81309102	.	C	CA	426.30	PASS	AB=0.911;AC=16;AF=0.444;AN=36;BaseQRankSum=-0.062;DP=600;FS=2.972;HRun=0;HaplotypeScore=51.4856;InbreedingCoeff=0.4432;MQ=15.79;MQ0=358;MQRankSum=-1.242;QD=2.34;ReadPosRankSum=-2.147;VQSLOD=1.9523;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:21,0:6:18.01:0,18,222	./.	./.	0/0:30,0:18:13.17:0,13,45	0/0:32,0:1:3.01:0,3,36	0/0:17,0:1:3.01:0,3,42	./.	./.	1/1:24,0:9:13.48:38,13,0	0/1:17,2:16:3.11:83,0,3	0/0:30,0:1:3.01:0,3,42	0/0:23,0:3:3.01:0,3,42	0/0:21,0:3:6.02:0,6,84	./.	1/1:8,1:4:5.87:71,6,0	./.	1/1:14,0:1:3.01:43,3,0	./.	1/1:45,1:26:0.20:125,0,0	./.	0/0:20,0:12:21.07:0,21,287	0/0:31,0:21:41.93:0,42,579	./.	1/1:29,1:15:5.08:69,5,0	0/1:10,1:6:15.86:43,0,16	1/1:7,1:7:9.06:78,9,0	1/1:21,0:5:3.19:7,3,0
chr10	81310243	.	CATATATATATATATAT	C	2694.45	PASS	AC=28;AF=0.824;AN=34;BaseQRankSum=0.611;DP=137;FS=0.000;HRun=0;HaplotypeScore=62.8199;InbreedingCoeff=0.3008;MQ=70.41;MQ0=10;MQRankSum=0.248;QD=28.97;ReadPosRankSum=1.866;VQSLOD=1.6433;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:13,0:3:3.63:0,4,10	0/0:21,0:7:6.24:0,6,32	1/1:2,0:2:3.01:110,3,0	1/1:4,0:8:3.01:112,3,0	./.	1/1:16,21:37:67.49:859,67,0	1/1:0,0:3:3.01:111,3,0	./.	1/1:1,2:2:6.02:201,6,0	0/0:3,0:3:0.47:0,0,1	1/1:0,0:1:3.01:33,3,0	./.	1/1:0,3:4:6.02:245,6,0	./.	1/1:6,0:5:5.98:153,6,0	1/1:3,0:2:3.01:38,3,0	1/1:1,4:5:9.01:110,9,0	./.	./.	./.	./.	1/1:0,0:3:3.01:112,3,0	1/1:2,2:4:3.01:133,3,0	./.	1/1:1,3:4:3.01:133,3,0	1/1:3,3:5:12.04:441,12,0
chr10	81310264	.	AT	A	450.13	PASS	AB=0.947;AC=21;AF=0.553;AN=38;BaseQRankSum=0.597;DP=130;FS=2.095;HRun=1;HaplotypeScore=42.5323;InbreedingCoeff=-0.1679;MQ=57.64;MQ0=9;MQRankSum=-2.395;QD=4.06;ReadPosRankSum=3.563;VQSLOD=0.5990;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:4:24.79:28,0,25	./.	0/0:13,0:2:2.94:0,3,18	0/1:30,0:6:1.26:1,0,44	0/0:1,1:2:3:0,3,29	1/1:8,0:7:2.22:7,2,0	0/0:1,0:1:3.01:0,3,37	0/1:26,0:26:99:379,0,376	1/1:3,0:3:2.22:7,2,0	./.	0/1:3,0:2:25.11:33,0,25	0/0:1,0:1:2.92:0,3,17	1/1:1,0:1:1.55:4,2,0	./.	1/1:4,0:4:4.26:13,4,0	./.	0/1:5,3:7:3.10:3,0,139	0/1:3,1:3:28.94:29,0,66	0/1:4,0:4:26.73:27,0,67	./.	./.	./.	./.	1/1:3,0:3:2.22:7,2,0	1/1:2,0:2:2.22:7,2,0	./.	0/1:4,0:4:1.91:2,0,20	0/1:7,0:5:14.50:15,0,38
chr10	81310906	.	C	CTT	2043.20	PASS	AB=0.969;AC=21;AF=0.375;AN=56;BaseQRankSum=9.422;DP=403;FS=2.213;HRun=1;HaplotypeScore=84.1424;InbreedingCoeff=0.0450;MQ=48.99;MQ0=18;MQRankSum=0.369;QD=9.59;ReadPosRankSum=0.562;VQSLOD=0.5551;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:27:9.41:0,9,92	0/0:6,0:6:15.01:0,15,162	0/0:23,0:10:22.84:0,23,204	0/0:53,0:17:34.08:0,34,253	0/1:15,0:14:17.36:141,0,17	0/0:17,0:16:8.99:0,9,75	0/0:13,0:13:17.82:0,18,138	0/1:32,0:32:99:267,0,237	0/0:10,0:10:8.87:0,9,57	0/1:4,8:12:32.97:131,0,33	1/1:15,0:14:6.16:182,6,0	0/0:12,0:12:2.38:0,2,24	0/1:14,0:13:14.85:15,0,71	0/0:11,0:10:5.28:0,5,104	0/1:12,0:12:1.26:141,0,1	0/1:10,0:10:0.64:141,0,1	0/1:8,0:8:4.80:5,0,29	0/1:7,0:7:34.19:34,0,48	0/1:17,0:16:84.19:186,0,84	1/1:15,0:15:44.28:367,44,0	1/1:9,0:9:14.60:107,15,0	0/0:10,0:10:12.21:0,12,99	0/0:5,0:5:8.78:0,9,61	0/1:5,0:5:0:0,0,0	0/1:7,0:7:32.55:58,0,33	1/1:8,0:8:3.96:153,4,0	0/1:16,0:16:50.90:201,0,51	0/1:11,0:9:37.56:80,0,38
chr10	81310912	.	C	CTCTCTCTCTCTTTCTCTT	7977.65	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=-1.506;DP=404;FS=7.715;HRun=0;HaplotypeScore=166.7865;InbreedingCoeff=0.3168;MQ=53.12;MQ0=16;MQRankSum=-2.723;QD=26.95;ReadPosRankSum=0.087;VQSLOD=3.0107;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:24:40.34:140,0,40	0/0:7,0:7:21:0,21,501	0/0:22,0:11:7.25:0,7,299	0/0:48,0:14:16.82:0,17,384	1/1:14,0:13:26.91:344,27,0	0/0:19,0:18:12.03:0,12,175	0/1:14,0:14:5.98:6,0,137	1/1:34,0:34:80.82:1680,81,0	0/1:9,0:9:7.84:8,0,61	1/1:9,0:9:17.64:353,18,0	1/1:14,0:13:32.53:509,33,0	0/1:11,0:11:40.87:209,0,41	0/1:17,0:16:99:204,0,179	0/1:12,0:11:99:172,0,188	1/1:12,0:12:27.07:432,27,0	1/1:8,0:8:24.08:397,24,0	1/1:3,3:11:6.02:437,6,0	0/1:6,0:6:27.87:104,0,28	1/1:18,0:18:45.87:728,46,0	1/1:16,0:16:45.13:739,45,0	1/1:8,0:8:18.04:255,18,0	0/0:12,0:12:20.80:0,21,269	0/1:8,0:8:3.99:4,0,153	0/1:5,0:5:0:0,0,0	1/1:6,0:6:12.02:158,12,0	1/1:8,0:8:21.96:351,22,0	1/1:20,0:20:38.41:563,38,0	0/1:9,0:7:1.05:187,0,1
chr10	81311012	.	A	ATTAT	818.23	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=2.016;DP=229;FS=0.944;HRun=0;HaplotypeScore=40.4054;InbreedingCoeff=0.7459;MQ=72.02;MQ0=0;MQRankSum=-2.419;QD=30.30;ReadPosRankSum=-1.043;VQSLOD=3.1666;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:18.06:0,18,325	0/0:5,0:5:5.99:0,6,108	0/0:6,0:5:8.06:0,8,102	0/0:11,0:7:0.67:0,1,136	0/0:12,0:12:30.10:0,30,511	1/1:4,4:9:18.06:400,18,0	0/0:3,0:3:9.03:0,9,140	0/0:23,0:23:54.17:0,54,885	1/1:2,1:4:12.04:218,12,0	0/0:9,0:9:24.07:0,24,396	0/0:8,0:8:18.06:0,18,314	1/1:2,0:3:6.02:117,6,0	0/0:10,0:10:24.08:0,24,387	0/0:5,0:5:12.04:0,12,218	0/0:6,0:6:15.05:0,15,259	0/0:4,0:4:12.04:0,12,218	0/0:19,0:19:54.18:0,54,946	0/0:6,0:6:18.06:0,18,309	0/0:15,0:15:42.14:0,42,733	0/0:4,0:4:6.02:0,6,109	0/0:5,0:5:9.03:0,9,164	1/1:3,1:5:9.03:158,9,0	1/1:1,4:5:3.01:75,3,0	./.	0/0:6,0:6:18.06:0,18,299	0/0:5,0:5:15.05:0,15,271	0/0:12,0:12:36.12:0,36,601	0/0:17,0:17:51.17:0,51,927
chr10	81311106	.	C	CT	2664.06	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=0.839;DP=436;FS=10.308;HRun=1;HaplotypeScore=46.7107;InbreedingCoeff=0.9912;MQ=100.29;MQ0=0;MQRankSum=-2.124;QD=38.61;ReadPosRankSum=0.630;VQSLOD=3.3472;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.28:0,87,1127	0/0:5,0:5:12.04:0,12,156	0/0:25,0:25:63.04:0,63,724	0/0:23,0:23:57.17:0,57,723	0/0:19,0:19:51.15:0,51,646	1/1:2,13:15:30.10:449,30,0	0/0:10,0:10:30.10:0,30,389	0/0:30,0:30:81.25:0,81,1038	1/1:0,11:11:33.11:495,33,0	0/0:16,0:16:45.13:0,45,560	0/0:14,0:14:42.12:0,42,531	1/1:0,10:10:30.10:450,30,0	0/0:15,0:15:45.13:0,45,570	0/0:20,0:20:60.20:0,60,778	0/0:13,0:13:39.13:0,39,506	0/0:15,0:15:45.15:0,45,584	0/0:23,0:23:66.20:0,66,841	0/0:7,0:7:21.01:0,21,252	0/0:18,0:18:51.14:0,51,632	0/0:13,0:13:36.12:0,36,467	0/0:19,0:19:57.17:0,57,725	1/1:0,8:8:24.08:360,24,0	1/1:0,14:14:42.10:604,42,0	1/1:0,11:11:33.11:495,33,0	0/0:15,0:15:45.15:0,45,584	0/0:14,0:14:39.13:0,39,506	0/0:17,0:17:51.12:0,51,619	0/0:7,0:7:21.07:0,21,272
chr10	81311609	.	GAT	G	13974.88	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-2.167;DP=591;FS=0.650;HRun=0;HaplotypeScore=117.4306;InbreedingCoeff=0.9834;MQ=80.85;MQ0=0;MQRankSum=1.343;QD=41.84;ReadPosRankSum=5.087;VQSLOD=6.4323;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.31:0,90,1724	0/0:3,0:3:9.03:0,9,174	0/0:19,0:19:54.19:0,54,1035	0/0:20,0:20:54.16:0,54,972	1/1:0,25:25:69.23:1056,69,0	0/0:20,0:20:50.43:0,50,868	0/0:17,0:17:51.17:0,51,984	1/1:1,30:31:90.28:1335,90,0	0/0:14,0:14:35.59:0,36,591	1/1:0,37:37:99:1637,111,0	1/1:2,21:23:60.20:918,60,0	0/0:20,0:20:47.85:0,48,877	0/0:21,0:21:63.18:0,63,1134	0/0:28,0:28:81.26:0,81,1506	1/1:0,19:19:51.17:781,51,0	1/1:0,13:13:36.12:551,36,0	1/1:0,20:20:54.18:827,54,0	1/1:0,12:12:33.11:505,33,0	1/1:1,13:14:36.12:551,36,0	1/1:2,25:27:69.23:1056,69,0	1/1:1,17:18:45.15:689,45,0	0/0:27,0:27:71.28:0,71,1246	0/0:23,0:23:53.80:0,54,917	0/0:14,0:14:20.81:0,21,355	1/1:0,25:25:72.24:1102,72,0	1/1:0,29:29:87.24:1268,87,0	1/1:1,37:38:99:1561,102,0	1/1:0,3:3:9.03:138,9,0
chr10	81311623	.	A	ACAGTCAT	10225.69	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-5.115;DP=608;FS=19.686;HRun=0;HaplotypeScore=194.8433;InbreedingCoeff=0.9810;MQ=82.98;MQ0=0;MQRankSum=-14.783;QD=78.66;ReadPosRankSum=0.503;VQSLOD=3.6334;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.30:0,87,2374	0/0:4,0:4:12.04:0,12,295	0/0:22,0:22:60.17:0,60,1170	0/0:18,0:18:50.55:0,51,969	0/0:28,0:28:78.27:0,78,2145	1/1:3,17:21:51.11:1922,51,0	0/0:21,0:21:57.18:0,57,1462	0/0:34,0:33:99:0,99,2313	1/1:1,12:15:27.09:1128,27,0	0/0:36,0:36:99:0,105,2936	0/0:21,0:21:57.18:0,57,1532	1/1:4,16:24:54.19:2240,54,0	0/0:16,0:16:48.15:0,48,1229	0/0:34,0:34:99:0,102,2635	0/0:18,0:18:51.13:0,51,1249	0/0:15,0:15:42.14:0,42,1174	0/0:22,0:22:54.19:0,54,1469	0/0:11,0:11:30.08:0,30,752	0/0:18,0:18:45.13:0,45,1106	0/0:23,0:23:69.21:0,69,1808	0/0:14,0:14:39.11:0,39,1029	1/1:5,23:30:66.10:2438,66,0	1/1:2,21:27:56.98:1832,57,0	1/1:3,5:13:20.99:665,21,0	0/0:23,0:23:66.23:0,66,1812	0/0:27,0:27:81.25:0,81,2093	0/0:41,0:41:99:0,120,3052	0/0:3,0:3:9.03:0,9,252
chr10	81312335	.	AT	A	1989.26	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.526;DP=442;FS=1.025;HRun=6;HaplotypeScore=45.5252;InbreedingCoeff=0.9924;MQ=70.85;MQ0=2;MQRankSum=0.148;QD=24.56;ReadPosRankSum=3.825;VQSLOD=3.0727;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:68.84:0,69,842	0/0:9,0:9:24.07:0,24,303	0/0:16,0:15:32.31:0,32,374	0/0:9,0:8:18.06:0,18,237	0/0:20,0:20:60.17:0,60,761	1/1:1,14:15:42.11:451,42,0	0/0:13,0:13:39.13:0,39,512	0/0:32,0:32:81.26:0,81,1053	1/1:2,17:19:36.09:387,36,0	0/0:20,0:20:57.19:0,57,749	0/0:14,0:14:39.12:0,39,500	1/1:1,9:10:27.07:290,27,0	0/0:13,0:13:33.09:0,33,414	0/0:13,0:13:39.11:0,39,486	0/0:20,0:20:54.17:0,54,697	0/0:17,0:17:51.17:0,51,670	0/0:13,0:13:35.89:0,36,430	0/0:10,0:10:29.46:0,29,363	0/0:30,0:30:84.26:0,84,1087	0/0:18,0:18:51.17:0,51,670	0/0:13,0:13:32.73:0,33,434	1/1:1,13:14:36.01:371,36,0	1/1:2,15:17:45.11:484,45,0	1/1:0,6:6:18.05:193,18,0	0/0:10,0:10:30.09:0,30,383	0/0:21,0:21:60.19:0,60,777	0/0:21,0:21:63.16:0,63,782	0/0:5,0:5:15.05:0,15,197
chr10	81313726	.	CT	C	262.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.428;DP=595;FS=3.617;HRun=9;HaplotypeScore=57.3853;InbreedingCoeff=0.9659;MQ=79.14;MQ0=0;MQRankSum=-2.460;QD=17.48;ReadPosRankSum=-0.087;VQSLOD=3.6638;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.25:0,87,995	0/0:7,0:7:21.06:0,21,242	0/0:17,0:18:34.22:0,34,442	0/0:12,0:12:12.75:0,13,129	0/0:28,0:28:81.22:0,81,922	0/0:26,0:26:72.21:0,72,831	1/1:2,13:15:39.01:357,39,0	0/0:28,0:28:78.22:0,78,892	0/0:27,0:27:72.19:0,72,811	0/0:20,1:21:32.71:0,33,630	0/0:22,0:22:60.14:0,60,664	0/0:12,0:12:33.10:0,33,381	0/0:21,0:21:60.18:0,60,691	0/0:26,0:26:78.23:0,78,900	0/0:21,0:21:60.18:0,60,693	0/0:17,0:17:51.14:0,51,579	0/0:25,0:25:69.19:0,69,786	0/0:16,0:16:42.12:0,42,485	0/0:17,0:17:39.12:0,39,450	0/0:33,0:33:93.22:0,93,1029	0/0:25,0:25:66.17:0,66,743	0/0:21,0:21:57.16:0,57,650	0/0:24,0:24:69.18:0,69,778	0/0:21,0:21:54.10:0,54,597	0/0:19,0:19:54.16:0,54,623	0/0:22,0:23:62.99:0,63,689	0/0:27,0:30:80.72:0,81,857	0/0:8,0:8:20.98:0,21,194
chr10	81314381	.	A	ACATAATAT	11979.54	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-4.813;DP=662;FS=1.285;HRun=0;HaplotypeScore=189.4352;InbreedingCoeff=0.9916;MQ=78.03;MQ0=0;MQRankSum=-15.519;QD=98.19;ReadPosRankSum=-0.193;VQSLOD=5.3865;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.32:0,96,2664	0/0:9,0:9:27.09:0,27,775	0/0:16,0:16:48.12:0,48,1194	0/0:21,0:21:54.18:0,54,1426	0/0:44,0:44:99:0,132,3723	1/1:7,13:22:54.18:2241,54,0	0/0:20,0:20:60.17:0,60,1482	0/0:29,0:29:78.26:0,78,2097	1/1:5,13:18:51.18:2248,51,0	0/0:39,0:39:99:0,114,3162	0/0:23,0:23:69.24:0,69,1980	1/1:6,15:22:63.21:2594,63,0	0/0:26,0:26:78.25:0,78,2177	0/0:19,0:19:57.18:0,57,1501	0/0:26,0:26:75.26:0,75,2098	0/0:13,0:13:30.10:0,30,861	0/0:24,0:24:66.22:0,66,1800	0/0:12,0:12:33.07:0,33,782	0/0:14,0:14:39.13:0,39,1005	0/0:40,0:40:99:0,105,2959	0/0:19,0:19:51.18:0,51,1464	1/1:7,14:25:54.18:2193,54,0	1/1:8,14:24:54.65:2225,55,0	1/1:2,7:11:10.91:479,11,0	0/0:18,0:18:51.18:0,51,1431	0/0:27,0:27:81.28:0,81,2302	0/0:42,0:42:99:0,120,3327	0/0:22,0:24:34.86:0,35,1506
chr10	81314834	.	AAAACACACACACACACACACAC	A	2042.94	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=6.344;DP=412;FS=2.546;HRun=0;HaplotypeScore=195.1380;InbreedingCoeff=0.7553;MQ=66.45;MQ0=13;MQRankSum=-0.526;QD=18.74;ReadPosRankSum=0.847;VQSLOD=2.1819;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:48.43:0,48,848	0/0:3,0:3:4.26:0,4,76	0/0:20,0:11:25.83:0,26,276	0/0:22,0:13:25.94:0,26,260	0/0:17,0:17:48.02:0,48,902	1/1:0,17:18:6.02:348,6,0	0/0:15,0:14:34.76:0,35,708	0/0:12,0:11:33.03:0,33,308	1/1:1,16:16:6.02:367,6,0	0/0:18,0:18:50.35:0,50,1111	0/0:16,0:16:33.46:0,33,734	1/1:2,13:14:2.85:184,3,0	0/0:15,0:15:26.89:0,27,227	0/1:13,0:13:26.45:26,0,547	0/0:16,0:15:39.06:0,39,998	0/0:16,0:16:42.08:0,42,622	0/0:24,0:24:62.89:0,63,875	0/0:6,0:6:17.92:0,18,217	0/0:9,0:9:25.28:0,25,419	0/0:10,0:10:27.02:0,27,685	0/0:23,0:23:50.28:0,50,1426	1/1:2,11:13:14.75:271,15,0	1/1:13,2:15:41.78:631,42,0	1/1:2,15:16:8.95:385,9,0	0/0:19,0:18:45.08:0,45,919	0/0:9,0:9:27.06:0,27,671	0/0:11,0:11:27.92:0,28,627	0/0:2,0:2:6:0,6,53
chr10	81314836	.	AACACACACAC	A	2212.23	PASS	AB=0.893;AC=40;AF=0.870;AN=46;BaseQRankSum=3.328;DP=407;FS=5.548;HRun=0;HaplotypeScore=120.1210;InbreedingCoeff=0.1602;MQ=65.23;MQ0=13;MQRankSum=-0.592;QD=6.70;ReadPosRankSum=0.888;VQSLOD=1.8044;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:2.68:11,3,0	./.	./.	0/0:21,0:12:0.89:0,1,2	1/1:13,3:16:6.45:108,6,0	1/1:18,0:18:6.02:139,6,0	0/0:14,0:13:6.02:0,6,81	./.	1/1:17,0:16:6.02:139,6,0	1/1:16,1:17:3.72:90,4,0	1/1:11,4:15:3.54:11,4,0	1/1:15,0:14:3.01:70,3,0	1/1:7,0:15:6.02:139,6,0	1/1:11,0:13:6.02:139,6,0	1/1:12,3:14:6.49:176,6,0	1/1:11,5:16:8.64:261,9,0	1/1:20,2:22:6.01:116,6,0	./.	1/1:10,0:10:0.30:1,0,0	0/1:10,0:10:5.62:33,0,6	1/1:25,0:25:3.07:11,3,0	1/1:13,0:13:2.88:69,3,0	1/1:15,0:15:6.02:101,6,0	1/1:19,0:17:6.02:139,6,0	1/1:9,6:16:15.01:334,15,0	1/1:11,0:11:12:145,12,0	0/1:8,3:11:11.95:82,0,12	./.
chr10	81314837	.	ACACACACAC	A	1196.20	PASS	AB=0.975;AC=22;AF=0.393;AN=56;BaseQRankSum=9.610;DP=416;FS=6.454;HRun=0;HaplotypeScore=116.1370;InbreedingCoeff=0.1257;MQ=64.45;MQ0=13;MQRankSum=-5.331;QD=4.75;ReadPosRankSum=-0.601;VQSLOD=1.8121;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:38.13:0,38,412	0/0:3,0:3:2.61:0,3,33	0/0:20,0:11:33.06:0,33,357	0/0:21,0:12:28.39:0,28,292	0/1:16,0:16:31.93:32,0,355	1/1:18,0:18:6.02:130,6,0	0/0:13,0:12:30.15:0,30,369	0/0:12,0:11:33.09:0,33,371	1/1:17,0:16:6.02:130,6,0	0/1:17,0:17:6.04:6,0,440	0/0:15,0:15:13.98:0,14,202	1/1:15,0:14:3.01:65,3,0	0/1:15,0:15:74.32:74,0,208	0/1:13,0:13:68.96:69,0,271	0/1:14,0:13:74.66:75,0,252	0/1:15,0:15:99:129,0,203	0/1:23,0:23:12.99:13,0,370	0/0:6,0:6:18.05:0,18,202	0/0:12,0:12:24.52:0,25,261	0/0:10,0:10:17.78:0,18,201	0/0:28,0:28:43.74:0,44,473	1/1:13,0:13:6.75:86,7,0	1/1:16,0:16:14.18:135,14,0	1/1:20,0:18:6.02:130,6,0	0/1:17,0:16:99:189,0,231	0/1:8,4:12:82.75:83,0,143	0/1:11,0:11:26.63:27,0,230	0/0:2,0:2:6.02:0,6,67
chr10	81315819	.	CT	C	589.89	PASS	AB=0.945;AC=7;AF=0.125;AN=56;BaseQRankSum=8.913;DP=664;FS=2.095;HRun=2;HaplotypeScore=117.7074;InbreedingCoeff=0.1652;MQ=65.02;MQ0=6;MQRankSum=-8.257;QD=5.51;ReadPosRankSum=-1.704;VQSLOD=0.0923;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,2078	0/0:9,0:9:24.07:0,24,339	0/0:34,0:22:36.78:0,37,621	0/0:50,0:37:96.15:0,96,1147	0/0:27,0:27:81.26:0,81,1159	0/1:9,3:12:15.98:173,0,16	0/0:20,0:20:60.18:0,60,854	0/0:34,0:32:96.25:0,96,1330	0/1:24,1:25:41.92:144,0,42	0/0:39,0:39:99:0,111,1610	0/0:20,0:20:60.13:0,60,834	0/1:13,0:13:24.43:40,0,24	0/0:15,0:15:39.13:0,39,560	0/0:25,0:25:63.16:0,63,893	0/0:25,0:25:75.21:0,75,1089	0/0:23,0:23:66.22:0,66,970	0/0:25,0:25:75.25:0,75,1109	0/0:7,0:7:21.05:0,21,292	0/0:12,0:12:33.06:0,33,442	0/0:34,0:34:96.30:0,96,1377	0/0:26,0:26:78.25:0,78,1146	1/1:20,3:23:9.73:194,10,0	0/1:24,1:25:91.37:146,0,91	0/1:9,0:9:25.62:26,0,30	0/0:21,0:21:60.20:0,60,896	0/0:21,0:21:63.21:0,63,916	0/0:30,0:29:87.28:0,87,1272	0/0:10,0:10:30.10:0,30,448
chr10	81315820	.	T	TCCC	2207.55	PASS	AB=0.700;AC=7;AF=0.125;AN=56;BaseQRankSum=10.712;DP=660;FS=0.477;HRun=1;HaplotypeScore=137.2035;InbreedingCoeff=0.2918;MQ=64.19;MQ0=6;MQRankSum=-10.235;QD=21.23;ReadPosRankSum=0.044;VQSLOD=0.4276;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,2582	0/0:9,0:9:24.08:0,24,440	0/0:32,0:20:44.01:0,44,767	0/0:51,0:37:94.41:0,94,1321	0/0:28,0:28:81.27:0,81,1437	0/1:7,3:10:21.45:281,0,21	0/0:20,0:20:60.19:0,60,1074	0/0:33,0:32:96.25:0,96,1603	0/1:11,13:24:18.25:650,0,18	0/0:38,0:38:99:0,111,2011	0/0:20,0:20:60.19:0,60,1044	0/1:9,4:13:1.45:290,0,1	0/0:15,0:15:39.11:0,39,677	0/0:25,0:25:63.17:0,63,1113	0/0:25,0:25:75.19:0,75,1319	0/0:23,0:23:66.22:0,66,1192	0/0:25,0:25:75.20:0,75,1328	0/0:8,0:8:21.07:0,21,378	0/0:11,0:12:33.09:0,33,487	0/0:33,0:33:96.27:0,96,1671	0/0:26,0:26:78.25:0,78,1420	1/1:12,11:23:30.22:613,30,0	0/1:13,12:25:99:455,0,114	0/1:4,5:9:41.43:55,0,41	0/0:22,0:22:60.68:0,61,1117	0/0:21,0:21:63.21:0,63,1131	0/0:30,0:29:87.27:0,87,1552	0/0:10,0:10:30.10:0,30,556
chr10	81315821	.	T	TCTC	1278.93	PASS	AB=0.706;AC=6;AF=0.107;AN=56;BaseQRankSum=10.595;DP=672;FS=1.954;HRun=0;HaplotypeScore=146.3061;InbreedingCoeff=-0.1139;MQ=63.58;MQ0=7;MQRankSum=-9.924;QD=11.73;ReadPosRankSum=1.355;VQSLOD=3.6760;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,2305	0/0:9,0:9:27.06:0,27,414	0/0:36,0:22:30.18:0,30,693	0/0:52,0:36:85.04:0,85,1136	0/0:27,0:27:81.24:0,81,1338	0/1:6,3:9:53.89:99,0,54	0/0:20,0:20:60.16:0,60,970	0/0:31,0:30:86.61:0,87,1323	0/1:13,13:26:54.50:507,0,54	0/0:37,0:37:99:0,108,1835	0/0:20,0:20:60.15:0,60,929	0/1:10,4:14:55.55:192,0,56	0/0:15,0:15:38.89:0,39,584	0/0:25,0:25:60.19:0,60,984	0/0:27,0:27:75.17:0,75,1230	0/0:24,0:24:66.18:0,66,1100	0/0:25,0:25:75.21:0,75,1261	0/0:8,0:8:24.03:0,24,362	0/0:12,0:12:29.08:0,29,397	0/0:33,0:33:96.01:0,96,1516	0/0:27,0:27:75.26:0,75,1311	0/1:15,10:25:17.37:307,0,17	0/1:14,12:25:99:268,0,124	0/1:4,5:9:29.96:30,0,74	0/0:23,0:23:63.19:0,63,1076	0/0:22,0:22:63.18:0,63,1016	0/0:30,0:29:87.28:0,87,1460	0/0:10,0:10:30.10:0,30,515
chr10	81315829	.	C	CCT	1958.10	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.902;DP=688;FS=0.000;HRun=0;HaplotypeScore=137.2203;InbreedingCoeff=0.9320;MQ=61.73;MQ0=9;MQRankSum=-11.148;QD=17.48;ReadPosRankSum=-3.382;VQSLOD=3.0861;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,131,1633	0/0:10,0:10:27.09:0,27,346	0/0:44,0:22:43.44:0,43,434	0/0:46,0:26:44.85:0,45,537	0/0:30,0:30:81.24:0,81,1013	1/1:6,2:8:12.04:164,12,0	0/0:19,0:19:42.13:0,42,534	0/0:32,0:31:60.18:0,60,742	1/1:17,7:25:45.02:588,45,0	0/0:42,0:42:99:0,102,1285	0/0:19,0:19:50.98:0,51,596	1/1:7,5:12:6.24:324,6,0	0/0:13,0:13:3.48:0,3,111	0/0:21,0:21:29.01:0,29,322	0/0:26,0:26:60.14:0,60,741	0/0:23,0:23:63.20:0,63,797	0/0:27,0:27:72.13:0,72,859	0/0:10,0:10:27.04:0,27,327	0/0:17,0:17:41.20:0,41,451	0/0:34,0:34:81.24:0,81,1012	0/0:27,0:27:62.55:0,63,764	1/1:13,14:27:21.89:397,22,0	1/1:19,10:28:41.19:531,41,0	1/1:5,6:11:11.50:133,11,0	0/0:24,0:24:63.20:0,63,808	0/0:25,0:25:66.19:0,66,812	0/0:32,0:31:81.22:0,81,1005	0/0:9,0:9:27.06:0,27,329
chr10	81315840	.	T	TTG	1141.60	PASS	AB=0.836;AC=11;AF=0.196;AN=56;BaseQRankSum=6.407;DP=714;FS=10.316;HRun=0;HaplotypeScore=156.9853;InbreedingCoeff=0.4503;MQ=57.42;MQ0=8;MQRankSum=-5.576;QD=7.18;ReadPosRankSum=-0.566;VQSLOD=2.6639;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,1:52:94.68:0,95,1595	0/0:10,0:10:27.08:0,27,323	0/0:46,0:21:21.32:0,21,225	0/0:38,0:23:24:0,24,235	0/0:34,0:34:84.04:0,84,967	1/1:15,0:15:26.74:226,27,0	0/0:19,0:19:37.66:0,38,412	0/0:29,0:28:53.56:0,54,669	0/1:25,0:25:0.32:148,0,0	0/0:42,0:43:96.05:0,96,1105	0/0:16,0:18:41.79:0,42,459	1/1:12,0:12:14.69:105,15,0	0/1:4,11:15:11.21:280,0,11	0/1:8,14:23:74.78:320,0,75	0/0:26,0:26:66.17:0,66,759	0/0:23,0:23:48.61:0,49,567	0/0:27,0:27:62.38:0,62,703	0/0:13,0:13:27.94:0,28,307	0/0:19,0:19:35.93:0,36,399	0/0:34,0:34:78.14:0,78,905	0/0:27,0:27:10.96:0,11,531	0/1:24,0:24:41.75:100,0,42	0/1:33,0:32:31.06:96,0,31	1/1:12,0:12:2.93:24,3,0	0/0:23,0:23:61.35:0,61,669	0/0:28,0:28:66.01:0,66,747	0/0:28,0:30:74.86:0,75,822	0/0:12,0:12:12.09:0,12,285
chr10	81315860	.	T	TTG	1618.53	PASS	AB=0.750;AC=10;AF=0.179;AN=56;BaseQRankSum=10.727;DP=719;FS=2.304;HRun=0;HaplotypeScore=129.4640;InbreedingCoeff=0.6776;MQ=56.90;MQ0=9;MQRankSum=-9.368;QD=13.16;ReadPosRankSum=-1.723;VQSLOD=2.8981;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,129,1483	0/0:11,0:11:27.08:0,27,331	0/0:47,0:24:35:0,35,406	0/0:31,0:19:38.27:0,38,417	0/0:32,0:32:81.22:0,81,963	1/1:2,14:16:35.85:455,36,0	0/0:23,0:23:56.84:0,57,664	0/0:33,0:32:56.86:0,57,690	1/1:14,11:27:4.69:314,5,0	0/0:39,0:38:79.47:0,79,930	0/0:20,0:20:48.15:0,48,587	1/1:7,2:11:20.75:237,21,0	0/0:17,0:17:8.64:0,9,134	0/0:24,0:24:26.74:0,27,306	0/0:24,0:24:69.22:0,69,849	0/0:23,0:23:32.11:0,32,600	0/0:28,0:28:35.16:0,35,615	0/0:11,0:11:24.08:0,24,295	0/0:22,0:22:48.06:0,48,555	0/0:29,0:28:69.22:0,69,847	0/0:21,0:21:51.15:0,51,616	0/1:16,2:22:32.49:363,0,32	0/1:18,11:29:15.36:325,0,15	1/1:5,11:17:6.49:81,6,0	0/0:26,0:26:60.49:0,60,716	0/0:28,0:28:72.04:0,72,849	0/0:38,0:37:63.23:0,63,935	0/0:13,0:13:12.50:0,13,149
chr10	81316397	.	A	AG	5074.92	PASS	AB=0.867;AC=13;AF=0.232;AN=56;BaseQRankSum=5.077;DP=553;FS=2.763;HRun=1;HaplotypeScore=66.0640;InbreedingCoeff=0.8848;MQ=89.81;MQ0=0;MQRankSum=-1.310;QD=37.32;ReadPosRankSum=3.831;VQSLOD=5.3921;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.13:0,63,782	0/0:9,0:9:27.09:0,27,350	0/0:22,0:22:63.14:0,63,777	0/0:21,0:21:53.32:0,53,680	0/0:22,0:22:66.20:0,66,842	1/1:1,22:23:60.20:897,60,0	0/0:10,0:10:27.06:0,27,322	0/0:25,0:25:72.20:0,72,906	1/1:1,18:19:54.18:804,54,0	0/0:24,0:24:66.21:0,66,845	0/0:23,0:23:69.19:0,69,866	1/1:0,22:22:63.21:942,63,0	0/0:20,0:20:57.16:0,57,713	0/0:17,0:17:51.17:0,51,661	0/0:24,0:24:72.23:0,72,932	0/1:11,2:13:50.26:50,0,389	0/0:19,0:19:57.15:0,57,708	0/0:5,0:5:12.03:0,12,142	0/0:22,0:22:63.20:0,63,817	0/0:28,0:28:84.27:0,84,1090	0/0:19,0:19:54.18:0,54,699	1/1:0,27:27:75.25:1124,75,0	1/1:1,26:27:72.24:1077,72,0	1/1:1,4:5:12.04:180,12,0	0/0:17,0:17:51.17:0,51,662	0/0:28,0:28:84.24:0,84,1052	0/0:35,0:35:99:0,105,1333	0/0:5,0:5:15.05:0,15,195
chr10	81316546	.	CTGTT	C	14909.65	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.516;DP=547;FS=2.617;HRun=0;HaplotypeScore=112.2432;InbreedingCoeff=0.9120;MQ=65.75;MQ0=4;MQRankSum=-4.453;QD=29.64;ReadPosRankSum=4.876;VQSLOD=4.8243;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,12:18:24.08:403,24,0	0/0:6,0:6:18.03:0,18,393	0/0:22,0:22:37.36:0,37,800	0/0:16,0:13:21.07:0,21,422	1/1:6,27:33:72.25:1192,72,0	1/1:3,0:23:44.79:402,45,0	1/1:6,5:11:9.03:151,9,0	1/1:9,23:32:69.61:1020,70,0	1/1:2,0:15:33.04:306,33,0	1/1:5,22:25:60.18:955,60,0	1/1:4,14:18:42.01:625,42,0	1/1:2,0:24:48.05:446,48,0	1/1:2,16:18:42.14:705,42,0	1/1:1,14:15:36.12:604,36,0	1/1:4,21:25:51.17:854,51,0	1/1:2,8:12:30.09:459,30,0	1/1:2,13:14:27.09:453,27,0	1/1:5,18:23:42.14:701,42,0	1/1:6,6:12:21.07:330,21,0	1/1:9,37:46:96.19:1506,96,0	1/1:2,11:12:18.06:302,18,0	1/1:3,0:16:31.51:304,32,0	1/1:7,0:20:26.58:241,27,0	1/1:2,0:6:3:28,3,0	1/1:3,13:16:30.10:504,30,0	1/1:5,17:22:51.17:850,51,0	1/1:4,24:28:60.21:1007,60,0	1/1:2,13:15:38.96:559,39,0
chr10	81316838	.	CA	C	2611.06	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.905;DP=466;FS=0.000;HRun=1;HaplotypeScore=84.2394;InbreedingCoeff=0.9590;MQ=83.95;MQ0=1;MQRankSum=-2.349;QD=31.84;ReadPosRankSum=1.175;VQSLOD=3.2928;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:51.14:0,51,752	0/0:3,0:3:9.03:0,9,138	0/0:23,0:22:35.43:0,35,753	0/0:30,0:29:46.36:0,46,869	0/0:23,0:23:57.17:0,57,822	1/1:0,22:22:63.21:879,63,0	0/0:21,0:21:63.19:0,63,931	0/0:28,0:28:81.27:0,81,1225	1/1:0,15:15:42.14:576,42,0	0/0:24,0:24:69.19:0,69,1027	0/0:14,0:14:27.09:0,27,414	1/1:0,9:9:21.07:292,21,0	0/0:7,0:7:18.01:0,18,254	0/0:16,0:16:47.98:0,48,680	0/0:13,0:13:36.12:0,36,542	0/0:14,0:14:39.13:0,39,596	0/0:11,0:11:27.09:0,27,403	0/0:7,0:6:18.01:0,18,248	0/0:26,0:26:75.19:0,75,1081	0/0:22,0:22:57.19:0,57,860	0/0:30,0:30:75.22:0,75,1086	1/1:0,13:13:33.58:460,34,0	1/1:0,17:17:36.12:503,36,0	1/1:0,6:6:6.02:83,6,0	0/0:16,0:16:39.13:0,39,587	0/0:19,0:19:57.11:0,57,809	0/0:11,0:10:33.08:0,33,479	0/0:5,0:5:15.05:0,15,229
chr10	81316880	.	CGTGTGTGTGTGT	C	2010.70	PASS	AB=0.976;AC=23;AF=0.500;AN=46;BaseQRankSum=3.739;DP=443;FS=6.508;HRun=0;HaplotypeScore=137.2061;InbreedingCoeff=0.4516;MQ=43.68;MQ0=40;MQRankSum=-1.985;QD=8.90;ReadPosRankSum=1.349;VQSLOD=2.2028;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:23:30.41:0,30,761	0/0:5,0:5:0.47:0,0,1	./.	./.	./.	0/0:18,0:17:1.95:0,2,5	0/0:25,0:21:12.52:0,13,497	1/1:16,6:20:15.04:200,15,0	1/1:16,0:15:5.21:76,5,0	1/1:14,8:22:13.47:511,13,0	./.	0/0:6,0:5:3.01:0,3,34	0/0:12,0:12:30.10:0,30,893	0/0:12,0:7:12.03:0,12,311	0/0:8,1:8:0.47:0,0,1	1/1:9,5:12:2.58:100,3,0	1/1:8,8:14:8.90:186,9,0	0/1:8,0:6:12.68:13,0,185	1/1:13,0:14:5.06:159,5,0	1/1:7,9:17:0.47:1,0,0	1/1:29,0:24:6.01:99,6,0	0/1:11,0:9:0:0,0,0	0/0:14,0:12:3:0,3,25	0/0:14,0:13:0:0,0,0	1/1:17,5:15:3:26,3,0	1/1:10,9:17:27.07:642,27,0	0/1:12,1:11:29.16:140,0,29	./.
chr10	81316918	.	TGTGAGAGAGAGAGAGAGA	T	164.66	PASS	AB=1.000;AC=10;AF=0.192;AN=52;BaseQRankSum=4.125;DP=408;FS=28.631;HRun=0;HaplotypeScore=159.9213;InbreedingCoeff=-0.1656;MQ=36.97;MQ0=37;MQRankSum=-2.766;QD=1.03;ReadPosRankSum=1.070;VQSLOD=1.2924;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:25:78.14:78,0,1395	0/0:5,0:4:3.01:0,3,119	./.	./.	0/0:21,0:20:12.04:0,12,649	0/1:22,0:21:9.59:10,0,107	0/0:25,0:21:21.43:0,21,998	0/0:22,0:21:27.05:0,27,1051	0/1:11,0:10:11.71:12,0,59	0/1:15,0:15:23.15:23,0,1028	0/0:16,0:15:6.02:0,6,353	0/0:10,0:8:3.01:0,3,73	0/0:13,0:13:5.67:0,6,992	0/1:14,0:10:8.54:9,0,837	0/0:12,0:10:18.03:0,18,1262	0/1:14,0:11:3.12:3,0,619	0/1:16,0:13:13.06:13,0,502	0/0:11,0:8:0.15:0,0,839	0/0:9,0:9:0.97:0,1,639	0/0:19,0:19:14.88:0,15,1049	0/0:20,0:16:9.03:0,9,435	0/0:13,0:12:8.99:0,9,144	0/0:16,0:15:3:0,3,25	0/0:18,0:17:2.03:0,2,133	1/1:16,5:14:3.01:107,3,0	0/1:17,0:16:34.75:35,0,1103	0/0:11,0:8:8.73:0,9,1224	0/0:7,0:4:12.04:0,12,723
chr10	81316920	.	TGAGAGAGA	T	414.14	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=2.956;DP=416;FS=12.026;HRun=0;HaplotypeScore=124.0443;InbreedingCoeff=0.6097;MQ=36.36;MQ0=37;MQRankSum=0.905;QD=4.99;ReadPosRankSum=0.476;VQSLOD=1.5201;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:27:24.04:0,24,688	0/0:5,0:4:3.01:0,3,44	./.	./.	0/0:21,0:20:6.22:0,6,229	1/1:15,4:21:11.26:240,11,0	0/0:23,0:20:15.28:0,15,450	0/0:25,0:24:33.06:0,33,702	1/1:8,1:10:2.80:58,3,0	0/0:15,0:15:21.96:0,22,493	0/0:18,0:17:6.02:0,6,178	0/0:5,4:8:0:0,0,0	0/0:15,0:14:15.05:0,15,324	0/0:14,0:10:12.04:0,12,410	0/0:12,0:10:17.56:0,18,610	0/0:14,0:11:8.75:0,9,309	0/0:16,0:13:9.92:0,10,233	0/0:12,0:9:12.04:0,12,377	0/0:9,0:9:12.01:0,12,308	0/0:19,0:19:15.05:0,15,488	0/0:19,0:15:5.78:0,6,143	1/1:10,1:12:6.02:137,6,0	1/1:12,1:15:3.01:75,3,0	0/0:13,2:17:2.03:0,2,59	1/1:20,0:14:3.01:37,3,0	0/0:17,0:16:18.04:0,18,478	0/0:11,0:8:21.07:0,21,551	0/0:7,0:4:12.04:0,12,336
chr10	81318028	.	ATT	A	259.47	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.681;DP=445;FS=3.048;HRun=4;HaplotypeScore=93.0468;InbreedingCoeff=0.8504;MQ=74.45;MQ0=0;MQRankSum=-1.114;QD=32.43;ReadPosRankSum=0.538;VQSLOD=3.1129;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:54.17:0,54,969	0/0:9,0:9:27.09:0,27,505	0/0:9,0:9:27.02:0,27,442	0/0:11,0:11:33.03:0,33,568	0/0:28,0:28:84.29:0,84,1553	0/0:17,0:17:45.15:0,45,808	1/1:0,8:8:24.08:353,24,0	0/0:29,0:29:87.28:0,87,1562	0/0:9,0:9:27.09:0,27,469	0/0:22,0:22:66.23:0,66,1233	0/0:31,0:31:93.28:0,93,1700	0/0:5,0:5:12.04:0,12,225	0/0:18,0:18:54.15:0,54,887	0/0:10,0:10:30.10:0,30,562	0/0:15,0:15:45.15:0,45,808	0/0:16,0:16:48.15:0,48,832	0/0:14,0:14:42.13:0,42,756	0/0:9,0:9:24.08:0,24,428	0/0:17,0:17:51.15:0,51,894	0/0:20,0:20:60.21:0,60,1124	0/0:12,0:12:36.11:0,36,644	0/0:4,0:4:12.04:0,12,225	0/0:15,0:15:45.14:0,45,771	0/0:2,0:2:6.02:0,6,91	0/0:12,0:12:36.08:0,36,638	0/0:35,0:35:99:0,102,1836	0/0:23,0:23:66.19:0,66,1175	0/0:23,0:23:69.19:0,69,1197
chr10	81318057	.	TC	T	2390.55	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.927;DP=459;FS=14.019;HRun=1;HaplotypeScore=64.7781;InbreedingCoeff=0.9711;MQ=66.89;MQ0=0;MQRankSum=-2.199;QD=37.35;ReadPosRankSum=0.723;VQSLOD=2.6677;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.15:0,54,810	0/0:11,0:11:33.11:0,33,528	0/0:4,0:4:12.04:0,12,191	0/0:7,0:7:12.66:0,13,181	0/0:33,0:33:99:0,99,1558	1/1:0,20:20:57.19:797,57,0	0/0:11,0:11:33.10:0,33,493	0/0:35,0:35:99:0,105,1636	1/1:0,11:11:33.11:461,33,0	0/0:23,0:23:69.24:0,69,1104	0/0:25,0:25:75.22:0,75,1149	1/1:0,5:5:15.05:210,15,0	0/0:17,0:17:51.14:0,51,768	0/0:9,0:9:27.05:0,27,382	0/0:20,0:20:60.20:0,60,959	0/0:18,0:18:54.18:0,54,863	0/0:20,0:20:60.20:0,60,948	0/0:8,0:8:24.08:0,24,383	0/0:20,0:20:60.19:0,60,937	0/0:25,0:25:75.24:0,75,1169	0/0:10,0:10:30.10:0,30,480	1/1:0,7:7:21.07:294,21,0	1/1:0,17:17:51.13:688,51,0	1/1:0,4:4:9.03:125,9,0	0/0:8,0:8:24.08:0,24,384	0/0:27,0:27:81.28:0,81,1292	0/0:25,0:25:75.26:0,75,1195	0/0:20,0:20:57.19:0,57,910
chr10	81318158	.	A	ATCTT	16827.98	PASS	AB=0.623;AC=42;AF=0.750;AN=56;BaseQRankSum=-7.566;DP=432;FS=11.893;HRun=0;HaplotypeScore=71.7188;InbreedingCoeff=0.7968;MQ=68.98;MQ0=1;MQRankSum=-2.221;QD=48.22;ReadPosRankSum=1.071;VQSLOD=4.5746;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:45.05:0,45,733	0/0:6,0:6:15.03:0,15,236	0/0:18,0:14:18.08:0,18,357	0/0:11,0:11:11.78:0,12,168	1/1:2,26:28:74.88:1499,75,0	1/1:3,10:13:18.06:439,18,0	1/1:3,8:11:12.04:305,12,0	1/1:4,31:35:93.22:1995,93,0	1/1:6,5:11:27:512,27,0	1/1:1,17:19:51.15:1121,51,0	1/1:2,26:29:68.97:1533,69,0	1/1:3,8:11:18.02:386,18,0	0/0:14,0:14:36.12:0,36,623	0/0:15,0:15:42.06:0,42,619	1/1:0,17:18:27.09:693,27,0	1/1:2,10:12:21.07:539,21,0	1/1:3,15:20:27.09:693,27,0	1/1:0,9:11:15.05:385,15,0	1/1:2,21:23:63.21:1398,63,0	1/1:2,7:10:17.99:402,18,0	1/1:1,7:8:15.05:385,15,0	1/1:5,1:6:15.02:193,15,0	1/1:1,9:10:27.05:624,27,0	0/1:4,3:7:8.91:197,0,9	1/1:3,8:11:14.72:295,15,0	1/1:3,20:23:60.18:1379,60,0	1/1:4,23:27:63.22:1563,63,0	0/1:1,5:6:8.87:293,0,9
chr10	81318187	.	CCTTT	C	1326.75	PASS	AB=0.636;AC=11;AF=0.196;AN=56;BaseQRankSum=8.976;DP=435;FS=4.155;HRun=0;HaplotypeScore=121.9940;InbreedingCoeff=0.8235;MQ=66.38;MQ0=1;MQRankSum=-8.381;QD=28.84;ReadPosRankSum=1.112;VQSLOD=3.7167;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:39.13:0,39,880	0/0:4,0:4:12.04:0,12,303	0/0:30,0:20:26.27:0,26,603	0/0:21,0:14:3.03:0,3,153	0/0:21,0:21:60.21:0,60,1442	1/1:3,6:9:15.47:227,15,0	0/0:11,0:11:24.04:0,24,524	0/0:37,0:37:69.01:0,69,1536	1/1:6,5:11:29.47:338,29,0	0/0:20,0:20:54.18:0,54,1305	0/0:26,0:26:60.19:0,60,1338	1/1:3,5:8:17.89:273,18,0	0/0:7,0:7:21.05:0,21,448	0/0:15,0:15:42.14:0,42,1032	0/0:20,0:20:42.13:0,42,959	0/0:11,0:11:18.06:0,18,455	0/0:21,0:21:54.17:0,54,1214	0/0:16,0:17:35.71:0,36,770	0/0:19,0:19:42.14:0,42,984	0/0:12,0:12:27.09:0,27,682	0/0:12,0:12:30.10:0,30,684	1/1:0,3:3:9.03:155,9,0	1/1:1,7:8:23.97:369,24,0	0/1:3,4:7:35.16:137,0,35	0/0:10,0:10:24:0,24,494	0/0:20,0:20:57.19:0,57,1392	0/0:22,0:22:45.14:0,45,1081	0/0:11,0:11:30.10:0,30,715
chr10	81318214	.	TTGTC	T	330.10	PASS	AB=0.885;AC=4;AF=0.071;AN=56;BaseQRankSum=6.018;DP=439;FS=14.589;HRun=0;HaplotypeScore=107.9780;InbreedingCoeff=-0.0802;MQ=62.79;MQ0=0;MQRankSum=-4.893;QD=9.17;ReadPosRankSum=0.971;VQSLOD=1.5903;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.21:0,60,1463	0/0:5,0:5:15.05:0,15,399	0/0:24,0:12:31.26:0,31,517	0/0:18,0:11:14.97:0,15,228	0/0:21,0:21:63.20:0,63,1437	0/1:6,1:7:25.26:25,0,175	0/0:9,0:9:20.70:0,21,351	0/0:30,0:30:80.77:0,81,1671	0/1:8,4:12:99:259,0,158	0/0:22,0:22:66.23:0,66,1759	0/0:21,0:21:57.18:0,57,1370	0/1:10,1:11:99:144,0,116	0/0:10,0:10:30.10:0,30,790	0/0:15,0:15:45.15:0,45,1062	0/0:18,0:18:45.15:0,45,1188	0/0:13,0:13:33.11:0,33,814	0/0:20,0:19:51.15:0,51,1210	0/0:16,0:16:36.12:0,36,996	0/0:14,0:14:39.13:0,39,952	0/0:22,0:22:63.22:0,63,1711	0/0:16,0:16:42.14:0,42,1080	0/0:3,0:3:9.03:0,9,130	0/1:6,0:6:4.95:5,0,180	0/0:8,0:8:5.49:0,5,110	0/0:17,0:17:36.46:0,36,1097	0/0:23,0:23:60.21:0,60,1639	0/0:19,0:19:51.17:0,51,1233	0/0:15,0:15:36.12:0,36,944
chr10	81318316	.	C	CT	1078.93	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=0.566;DP=380;FS=0.653;HRun=9;HaplotypeScore=50.8305;InbreedingCoeff=0.6573;MQ=54.76;MQ0=3;MQRankSum=3.128;QD=11.36;ReadPosRankSum=-0.156;VQSLOD=2.2023;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:23:58.71:634,59,0	0/0:11,0:11:26.99:0,27,234	0/0:10,0:7:13.63:0,14,110	0/0:6,0:4:9:0,9,78	0/0:24,0:24:56.96:0,57,494	0/0:5,0:5:2.36:0,2,4	0/1:9,0:9:9.12:9,0,58	0/0:27,1:27:27.29:0,27,457	1/1:9,0:9:1.28:16,1,0	0/0:7,0:7:11.97:0,12,104	0/0:23,1:23:20.77:0,21,409	1/1:7,0:7:1.54:7,2,0	1/1:0,7:8:20.89:213,21,0	1/1:1,12:13:10.05:337,10,0	0/0:16,0:16:41.99:0,42,364	0/0:5,0:5:11.99:0,12,104	0/0:19,0:19:44.97:0,45,391	0/0:12,0:12:26.92:0,27,230	0/0:14,0:13:23.98:0,24,208	0/0:19,0:19:53.99:0,54,468	0/0:6,0:6:17.98:0,18,152	0/0:4,0:4:0.79:0,1,1	1/1:13,0:13:0.02:14,0,0	0/1:12,0:12:1.55:2,0,2	0/0:18,0:18:47.98:0,48,416	0/0:17,0:17:44.48:0,44,373	0/0:20,0:20:50.98:0,51,443	0/0:19,0:18:47.99:0,48,416
chr10	81318325	.	TA	T	1651.14	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=7.625;DP=380;FS=0.000;HRun=1;HaplotypeScore=48.1016;InbreedingCoeff=0.8515;MQ=50.02;MQ0=15;MQRankSum=-5.596;QD=28.97;ReadPosRankSum=-0.279;VQSLOD=3.1143;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:48.38:0,48,343	0/0:9,0:9:27.09:0,27,367	0/0:14,0:6:9.43:0,9,159	0/0:9,0:3:9.03:0,9,120	0/0:25,0:24:72.07:0,72,897	1/1:0,5:5:15.05:204,15,0	0/1:8,0:8:16.45:16,0,30	0/0:29,0:26:54.46:0,54,722	1/1:1,7:8:18.02:224,18,0	0/0:4,0:4:12.04:0,12,164	0/0:24,0:23:59.94:0,60,734	1/1:0,7:7:21.07:285,21,0	0/0:10,0:10:26.06:0,26,150	0/0:16,0:16:44.32:0,44,303	0/0:16,0:15:42.14:0,42,569	0/0:4,0:4:12.04:0,12,162	0/0:17,0:17:45.14:0,45,611	0/0:13,0:13:32.84:0,33,367	0/0:10,0:9:27.06:0,27,339	0/0:20,0:20:60.11:0,60,763	0/0:6,0:6:18.04:0,18,228	1/1:0,4:4:9.03:124,9,0	1/1:0,13:13:39.04:493,39,0	1/1:0,12:12:36.12:491,36,0	0/0:21,0:21:59.94:0,60,752	0/0:16,0:16:48.13:0,48,613	0/0:20,0:20:57.06:0,57,730	0/0:17,0:16:48.09:0,48,599
chr10	81320417	.	CTA	C	5611.67	PASS	AB=0.590;AC=27;AF=0.563;AN=48;BaseQRankSum=2.767;DP=472;FS=2.371;HRun=0;HaplotypeScore=34.2004;InbreedingCoeff=0.7732;MQ=32.37;MQ0=175;MQRankSum=2.441;QD=19.22;ReadPosRankSum=-0.311;VQSLOD=4.0037;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:15:30.10:0,30,547	0/0:23,0:9:18.06:0,18,329	./.	./.	1/1:6,17:17:36.12:515,36,0	0/0:10,0:1:3.01:0,3,55	0/0:4,0:2:6.02:0,6,110	./.	0/0:15,0:5:3.01:0,3,55	1/1:20,11:14:33.07:414,33,0	1/1:5,14:15:39.09:529,39,0	0/0:7,0:2:6.02:0,6,110	0/0:18,0:17:30.10:0,30,513	0/0:13,0:13:21.07:0,21,384	1/1:0,22:17:27.09:387,27,0	1/1:2,10:8:21.07:301,21,0	1/1:6,2:3:6.02:86,6,0	1/1:4,11:11:21.07:301,21,0	1/1:34,8:8:21.06:283,21,0	1/1:2,29:27:69.23:988,69,0	1/1:2,4:3:9.03:129,9,0	0/0:14,0:3:6.02:0,6,110	0/0:9,0:6:18.06:0,18,329	./.	1/1:10,10:9:18.06:258,18,0	1/1:5,12:11:33.11:470,33,0	1/1:5,18:19:36.12:515,36,0	0/1:7,16:15:18.75:437,0,19
chr10	81321150	.	A	AC	4795.04	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.375;DP=532;FS=12.395;HRun=0;HaplotypeScore=69.2905;InbreedingCoeff=0.9719;MQ=70.16;MQ0=0;MQRankSum=0.020;QD=43.59;ReadPosRankSum=1.018;VQSLOD=4.4052;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.22:0,66,922	0/0:12,0:12:36.12:0,36,502	0/0:11,0:11:26.71:0,27,330	0/0:6,0:6:5.10:0,5,143	0/0:44,0:44:99:0,126,1761	1/1:0,19:19:57.19:911,57,0	0/0:13,0:13:39.11:0,39,526	0/0:24,0:24:72.22:0,72,964	1/1:0,17:17:48.16:767,48,0	0/0:29,0:29:84.27:0,84,1158	0/0:27,0:27:81.27:0,81,1131	1/1:0,19:19:51.17:815,51,0	0/0:16,0:16:48.16:0,48,671	0/0:19,0:19:57.18:0,57,780	0/0:17,0:17:48.15:0,48,649	0/0:9,0:9:27.09:0,27,378	0/0:16,0:16:45.15:0,45,629	0/0:8,0:8:24.08:0,24,335	0/0:18,0:18:54.17:0,54,740	0/0:26,0:26:75.22:0,75,1012	0/0:6,0:6:18.05:0,18,237	1/1:1,15:16:45.15:719,45,0	1/1:1,29:30:78.74:1247,79,0	1/1:0,9:9:21.07:336,21,0	0/0:33,0:33:99:0,99,1366	0/0:24,0:24:72.24:0,72,1006	0/0:31,0:31:93.31:0,93,1299	0/0:11,0:11:30.10:0,30,419
chr10	81321747	.	A	ATGTGTGTGTGTG	5651.64	PASS	AB=0.922;AC=31;AF=0.596;AN=52;BaseQRankSum=-3.344;DP=389;FS=16.812;HRun=0;HaplotypeScore=149.3975;InbreedingCoeff=0.5846;MQ=46.28;MQ0=14;MQRankSum=-3.055;QD=22.16;ReadPosRankSum=-0.911;VQSLOD=2.4534;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:13:9.65:0,10,239	0/0:5,0:5:9.03:0,9,312	0/0:44,0:18:10.59:0,11,242	0/0:20,0:10:2.37:0,2,8	1/1:16,0:16:7.48:186,7,0	0/0:21,0:18:1.70:0,2,297	0/1:12,0:6:0:0,0,0	1/1:25,0:24:27.09:561,27,0	0/1:16,0:14:27.07:27,0,395	1/1:10,0:10:20.35:486,20,0	1/1:13,0:13:15.01:346,15,0	0/0:7,0:7:14.76:0,15,184	0/1:11,0:10:3.03:3,0,327	0/0:11,0:11:18.05:0,18,378	1/1:16,0:15:17.68:474,18,0	1/1:10,0:10:14.79:386,15,0	1/1:5,0:9:3.01:71,3,0	./.	1/1:13,0:11:3.97:265,4,0	1/1:11,0:10:15.52:480,16,0	0/1:4,6:11:0:0,0,0	./.	0/0:7,0:7:11.93:0,12,238	0/1:13,0:12:5.76:6,0,325	1/1:13,0:13:18.01:349,18,0	1/1:20,0:18:17.93:384,18,0	1/1:24,0:24:46.37:1201,46,0	1/1:11,0:11:15.05:425,15,0
chr10	81321768	.	TGAGA	T	747.61	PASS	AB=1.000;AC=21;AF=0.656;AN=32;BaseQRankSum=1.701;DP=340;FS=5.932;HRun=0;HaplotypeScore=126.4901;InbreedingCoeff=0.1433;MQ=43.90;MQ0=14;MQRankSum=-1.533;QD=4.06;ReadPosRankSum=-1.701;VQSLOD=1.9757;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:11:6.02:66,6,0	./.	./.	./.	1/1:14,0:16:0.75:2,1,0	0/1:21,0:18:3.90:31,0,4	./.	./.	0/1:16,0:14:19.92:32,0,20	1/1:8,0:9:3:27,3,0	./.	0/0:6,0:6:1.03:0,1,17	0/0:12,0:11:0:0,0,0	1/1:12,0:12:6.12:38,6,0	1/1:14,1:17:0.13:1,0,0	1/1:6,1:8:2.99:23,3,0	./.	./.	1/1:11,0:13:15.02:150,15,0	./.	0/0:6,0:6:0:0,0,0	./.	0/0:5,0:8:0:0,0,1	0/1:14,0:13:17.07:78,0,17	./.	1/1:11,3:16:24.06:275,24,0	1/1:20,0:24:12.02:119,12,0	./.
chr10	81321818	.	TGA	T	2907.21	PASS	AB=0.833;AC=35;AF=0.648;AN=54;BaseQRankSum=3.238;DP=302;FS=0.000;HRun=0;HaplotypeScore=77.7183;InbreedingCoeff=0.5235;MQ=64.81;MQ0=14;MQRankSum=-1.735;QD=14.91;ReadPosRankSum=1.667;VQSLOD=3.1909;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:21.01:0,21,243	0/0:6,0:6:12.04:0,12,186	0/0:18,0:8:14.73:0,15,273	0/0:27,0:9:18.99:0,19,328	0/1:0,10:10:0:0,0,0	1/1:18,0:17:10.09:68,10,0	0/0:9,0:8:2.32:0,2,25	1/1:0,24:24:69:946,69,0	1/1:10,0:10:3.55:41,4,0	1/1:0,3:3:9.03:135,9,0	1/1:0,10:10:2.99:34,3,0	1/1:6,0:6:2.44:6,2,0	1/1:2,9:10:3.01:35,3,0	1/1:6,1:7:18.04:248,18,0	./.	1/1:0,6:6:6.02:80,6,0	1/1:1,5:6:6.02:74,6,0	1/1:2,0:2:3.01:40,3,0	1/1:4,11:12:33.10:448,33,0	1/1:0,10:10:6.02:74,6,0	0/0:0,18:18:0:0,0,0	0/0:1,0:1:2.60:0,3,10	0/1:7,0:7:0.03:0,0,0	0/1:11,0:10:11.49:34,0,11	0/0:0,7:7:0:0,0,0	1/1:0,13:13:35.99:485,36,0	1/1:1,15:16:21.07:276,21,0	1/1:0,10:10:3.01:38,3,0
chr10	81322990	.	T	TG	1720.33	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-4.301;DP=476;FS=3.335;HRun=2;HaplotypeScore=81.3600;InbreedingCoeff=0.8121;MQ=76.75;MQ0=1;MQRankSum=-1.880;QD=15.36;ReadPosRankSum=1.701;VQSLOD=3.7443;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:35.91:0,36,295	0/0:4,0:4:9.03:0,9,111	0/0:25,0:21:15.44:0,15,277	0/0:14,0:13:27.80:0,28,212	0/0:38,0:38:56.01:0,56,340	1/1:14,3:17:30.07:330,30,0	0/1:19,0:19:19.25:19,0,129	0/0:17,0:18:23.68:0,24,190	1/1:9,0:9:15:137,15,0	0/0:20,0:20:32.43:0,32,192	0/0:26,0:26:29.24:0,29,265	1/1:14,1:15:24.05:248,24,0	0/0:13,0:13:23.93:0,24,190	0/0:9,0:9:26.92:0,27,214	0/0:15,0:15:28.13:0,28,160	0/0:14,0:14:35.75:0,36,185	0/0:13,0:13:7.37:0,7,113	0/0:18,0:19:24.47:0,24,145	0/0:13,0:13:26.56:0,27,184	0/0:28,0:27:56.70:0,57,295	0/0:6,0:6:8.91:0,9,67	1/1:22,2:24:56.41:602,56,0	1/1:19,2:20:44.94:452,45,0	1/1:7,0:7:12.02:117,12,0	0/0:13,0:13:23.01:0,23,122	0/0:33,0:33:62.40:0,62,340	0/0:24,0:23:32.76:0,33,168	0/0:4,0:4:1.08:0,1,18
chr10	81322992	.	G	GTT	8919.95	PASS	AB=0.550;AC=43;AF=0.768;AN=56;BaseQRankSum=-7.645;DP=489;FS=3.469;HRun=11;HaplotypeScore=74.5422;InbreedingCoeff=0.8252;MQ=72.07;MQ0=1;MQRankSum=-1.666;QD=21.60;ReadPosRankSum=-0.397;VQSLOD=4.3344;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:17:33.18:0,33,160	0/0:4,0:4:12.02:0,12,116	0/0:21,0:17:18.30:0,18,208	0/0:13,0:12:9.63:0,10,71	1/1:7,25:35:66.50:824,66,0	1/1:3,1:17:18.52:251,19,0	1/1:6,0:19:1.35:65,1,0	1/1:13,5:18:33.58:468,34,0	1/1:1,1:9:12:119,12,0	1/1:2,16:22:50.56:591,51,0	1/1:7,18:31:61.48:677,61,0	1/1:1,0:14:21.95:249,22,0	0/0:1,0:12:19.20:0,19,83	0/0:2,0:9:19.12:0,19,82	1/1:2,13:15:24.08:344,24,0	1/1:3,8:14:33.09:418,33,0	1/1:4,11:17:3.13:172,3,0	1/1:7,14:22:23.57:312,24,0	1/1:5,7:15:28.93:330,29,0	1/1:4,21:26:68.68:910,69,0	1/1:3,3:8:11.53:137,12,0	1/1:4,0:24:28.53:580,29,0	0/1:4,0:21:0.38:342,0,0	1/1:1,0:8:15.03:164,15,0	1/1:2,10:13:29.58:379,30,0	1/1:6,25:32:78.93:1007,79,0	1/1:5,21:26:35.77:486,36,0	1/1:0,3:4:8.52:95,9,0
chr10	81323537	.	GCA	G	5035.27	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=16.229;DP=577;FS=0.000;HRun=0;HaplotypeScore=112.1728;InbreedingCoeff=0.9956;MQ=89.45;MQ0=0;MQRankSum=-15.599;QD=44.96;ReadPosRankSum=2.515;VQSLOD=6.2984;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:36.12:0,36,712	0/0:9,0:9:27.09:0,27,529	0/0:37,0:37:92.78:0,93,2029	0/0:23,0:23:69.24:0,69,1372	0/0:38,0:38:99:0,114,2274	1/1:0,23:23:69.23:1064,69,0	0/0:15,0:15:45.15:0,45,827	0/0:27,0:27:81.28:0,81,1627	1/1:0,20:20:57.19:901,57,0	0/0:36,0:36:99:0,108,2118	0/0:27,0:27:81.28:0,81,1644	1/1:0,18:18:54.18:850,54,0	0/0:14,0:14:42.14:0,42,853	0/0:27,0:27:78.27:0,78,1575	0/0:18,0:17:54.18:0,54,1058	0/0:18,0:18:54.17:0,54,1043	0/0:15,0:15:45.15:0,45,869	0/0:10,0:10:21.05:0,21,370	0/0:10,0:10:30.10:0,30,610	0/0:27,0:27:81.26:0,81,1587	0/0:18,0:18:51.17:0,51,998	1/1:0,19:19:57.19:912,57,0	1/1:0,24:24:69.23:1089,69,0	1/1:0,8:8:15.05:219,15,0	0/0:15,0:15:45.15:0,45,875	0/0:25,0:25:75.25:0,75,1472	0/0:32,0:31:96.33:0,96,1868	0/0:12,0:12:36.12:0,36,674
chr10	81324084	.	T	TGGAAAGGTACACC	11679.72	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=10.177;DP=508;FS=5.712;HRun=0;HaplotypeScore=227.3170;InbreedingCoeff=0.7271;MQ=85.72;MQ0=0;MQRankSum=-11.374;QD=92.70;ReadPosRankSum=-2.776;VQSLOD=3.8033;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,5009	0/0:4,0:4:12.04:0,12,425	0/0:20,0:20:60.18:0,60,2173	0/0:16,0:16:44.94:0,45,1359	0/0:19,0:19:57.19:0,57,1788	1/1:7,7:14:35.91:2204,36,0	0/0:16,0:16:38:0,38,1140	0/1:25,0:25:11.69:12,0,1775	1/1:15,7:22:8.32:3314,8,0	0/0:17,0:17:48.16:0,48,1352	0/0:20,0:20:57.20:0,57,1835	1/1:3,10:14:42.10:2604,42,0	0/0:19,0:19:57.20:0,57,2315	0/0:18,0:18:45.15:0,45,1816	0/0:29,0:29:33.42:0,33,2331	0/0:22,0:22:66.23:0,66,2066	0/1:22,0:22:3.60:4,0,1758	0/1:3,0:3:15.84:16,0,183	0/0:17,0:17:21.37:0,21,1315	0/0:22,0:22:37.20:0,37,1812	0/0:27,0:27:57.38:0,57,2396	1/1:4,5:9:21.07:1232,21,0	1/1:4,8:12:27.09:1707,27,0	1/1:2,3:5:12.04:589,12,0	0/0:17,0:17:51.18:0,51,1536	0/0:18,0:18:46.36:0,46,1558	0/0:30,0:30:90.30:0,90,2820	0/0:7,0:7:11.47:0,11,409
chr10	81324333	.	CGTGTGT	C	4752.76	PASS	AB=0.838;AC=40;AF=0.800;AN=50;BaseQRankSum=2.272;DP=495;FS=0.000;HRun=0;HaplotypeScore=124.3275;InbreedingCoeff=0.3882;MQ=52.81;MQ0=10;MQRankSum=-4.199;QD=11.91;ReadPosRankSum=1.255;VQSLOD=3.6783;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:17:11.83:0,12,310	0/0:7,0:7:21.07:0,21,500	./.	./.	1/1:17,9:27:30.10:590,30,0	1/1:11,0:14:12.04:167,12,0	0/0:28,0:29:14.40:0,14,353	1/1:30,0:30:6:66,6,0	0/1:11,0:15:1.67:191,0,2	1/1:19,8:27:24.05:421,24,0	1/1:16,1:18:9.03:163,9,0	1/1:9,0:16:12.04:167,12,0	1/1:9,5:13:9.03:183,9,0	1/1:10,1:11:6.02:122,6,0	1/1:13,7:20:18.06:366,18,0	1/1:12,5:16:15.05:305,15,0	1/1:12,6:18:6.02:122,6,0	0/1:7,0:6:41.12:41,0,120	1/1:14,2:15:6.02:122,6,0	1/1:22,5:28:15.05:284,15,0	./.	1/1:12,0:17:12.04:167,12,0	1/1:6,0:14:18.06:246,18,0	1/1:7,0:8:5.93:59,6,0	1/1:14,6:20:12.04:222,12,0	0/1:17,4:21:60.90:229,0,61	1/1:17,7:25:18.94:367,19,0	0/1:10,4:15:66.11:152,0,66
chr10	81324449	.	TC	T	3799.49	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.532;DP=561;FS=25.810;HRun=2;HaplotypeScore=81.4486;InbreedingCoeff=0.9916;MQ=71.66;MQ0=2;MQRankSum=-7.990;QD=31.40;ReadPosRankSum=2.694;VQSLOD=1.9196;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.14:0,51,721	0/0:9,0:9:27.09:0,27,405	0/0:35,0:30:82.01:0,82,1047	0/0:30,0:27:72.01:0,72,998	0/0:16,0:16:48.16:0,48,718	1/1:0,33:33:96.31:1244,96,0	0/0:32,0:32:81.24:0,81,1169	0/0:26,0:26:72.24:0,72,1072	1/1:3,17:19:34.08:569,34,0	0/0:15,0:15:45.15:0,45,668	0/0:21,0:21:63.20:0,63,924	1/1:0,23:23:69.18:874,69,0	0/0:20,0:20:57.19:0,57,852	0/0:18,1:19:18.33:0,18,767	0/0:14,0:14:42.14:0,42,629	0/0:18,0:18:51.17:0,51,764	0/0:8,0:8:18.06:0,18,269	0/0:7,0:6:18.04:0,18,248	0/0:19,0:19:57.19:0,57,849	0/0:21,0:21:63.21:0,63,942	0/0:33,0:33:87.25:0,87,1267	1/1:0,15:15:39.08:487,39,0	1/1:2,8:10:15.05:193,15,0	1/1:1,19:20:36.05:432,36,0	0/0:22,0:22:63.21:0,63,941	0/0:26,0:26:78.25:0,78,1137	0/0:19,0:19:57.18:0,57,821	0/0:11,0:11:30.10:0,30,449
chr10	81324492	.	T	TC	2708.47	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.970;DP=472;FS=27.553;HRun=2;HaplotypeScore=71.5450;InbreedingCoeff=0.9486;MQ=69.14;MQ0=5;MQRankSum=-6.345;QD=32.63;ReadPosRankSum=-1.434;VQSLOD=1.4431;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.06:0,45,530	0/0:13,0:13:36.11:0,36,452	0/0:37,0:19:44.10:0,44,572	0/0:32,0:20:46.93:0,47,540	0/0:14,0:14:33.09:0,33,409	1/1:3,19:22:60.19:844,60,0	0/0:20,0:20:54.08:0,54,632	0/0:20,0:20:60.17:0,60,714	1/1:2,15:15:39.13:560,39,0	0/0:12,0:12:36.11:0,36,446	0/0:19,0:18:54.15:0,54,645	1/1:2,18:20:57.18:801,57,0	0/0:17,0:17:47.79:0,48,551	0/0:16,1:17:5.15:0,5,513	0/0:14,0:14:39.12:0,39,483	0/0:15,0:15:42.12:0,42,506	0/0:13,0:12:30.05:0,30,354	0/0:7,0:7:18.06:0,18,223	0/0:17,0:17:51.15:0,51,618	0/0:16,0:16:45.09:0,45,528	0/0:25,0:25:69.15:0,69,811	1/1:1,6:7:15.05:212,15,0	1/1:3,2:5:6.02:86,6,0	1/1:0,12:12:26.92:387,27,0	0/0:19,0:19:51.11:0,51,614	0/0:12,0:12:33.10:0,33,408	0/0:21,0:21:60.18:0,60,728	0/0:12,0:12:33.10:0,33,406
chr10	81324501	.	TTCTCTCTC	T	157.79	PASS	AB=0.917;AC=5;AF=0.109;AN=46;BaseQRankSum=1.648;DP=503;FS=18.519;HRun=0;HaplotypeScore=134.2622;InbreedingCoeff=0.2205;MQ=58.47;MQ0=11;MQRankSum=-1.266;QD=2.55;ReadPosRankSum=1.248;VQSLOD=1.6878;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:11.86:0,12,95	0/0:13,0:13:9.48:0,9,222	./.	./.	0/0:17,0:17:3.01:0,3,96	0/0:20,0:18:6.49:0,6,126	0/0:16,0:16:3:0,3,25	0/0:36,0:35:22.03:0,22,186	0/1:16,0:14:11.24:11,0,107	0/0:18,0:17:21.05:0,21,570	0/0:20,0:19:3.48:0,3,96	0/0:17,0:17:9.02:0,9,143	0/1:10,5:15:0.06:86,0,0	1/1:7,5:15:8.24:156,8,0	0/0:17,0:17:3:0,3,25	./.	0/0:17,0:16:15.52:0,16,420	0/0:8,0:8:8.99:0,9,153	0/0:17,0:16:7.84:0,8,213	0/0:20,0:20:0.47:0,0,1	0/0:23,0:23:6.02:0,6,169	./.	./.	0/1:16,0:15:9.96:10,0,316	0/0:23,0:23:9.03:0,9,291	0/0:20,0:19:15.51:0,16,362	0/0:25,0:25:12.03:0,12,269	0/0:16,0:16:3.01:0,3,94
chr10	81324553	.	CTT	C	4539.27	PASS	AB=1.000;AC=43;AF=0.796;AN=54;BaseQRankSum=-3.353;DP=395;FS=7.571;HRun=3;HaplotypeScore=72.4801;InbreedingCoeff=0.6466;MQ=50.52;MQ0=11;MQRankSum=1.167;QD=14.01;ReadPosRankSum=0.094;VQSLOD=1.3156;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:31.49:0,31,260	0/0:11,0:11:29.80:0,30,273	0/1:14,0:8:2.54:3,0,57	0/1:13,0:8:13.50:13,0,20	1/1:13,0:13:35.79:285,36,0	1/1:15,0:14:17.35:130,17,0	1/1:12,1:13:13.18:98,13,0	1/1:17,0:17:50.89:434,51,0	1/1:24,0:23:37.54:312,38,0	1/1:14,0:14:28.27:227,28,0	1/1:17,0:17:35.14:291,35,0	1/1:13,0:13:32.68:246,33,0	0/0:18,0:18:21.43:0,21,225	0/0:18,0:18:23.58:0,24,207	1/1:10,0:10:17.92:143,18,0	1/1:10,0:10:14.46:115,14,0	0/1:11,0:11:10.51:78,0,11	1/1:8,0:8:2.73:68,3,0	1/1:16,0:15:27.41:307,27,0	1/1:16,0:16:29.96:249,30,0	1/1:14,0:14:23.75:217,24,0	./.	1/1:7,0:7:20.93:167,21,0	1/1:18,1:18:29.96:310,30,0	1/1:20,0:20:39.04:306,39,0	1/1:19,0:18:42.69:336,43,0	1/1:17,0:17:23.38:185,23,0	1/1:4,0:3:3.44:21,3,0
chr10	81324759	.	A	AAAAATAAGG	2345.96	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.355;DP=408;FS=84.118;HRun=0;HaplotypeScore=117.6196;InbreedingCoeff=0.9178;MQ=78.48;MQ0=0;MQRankSum=-8.472;QD=55.86;ReadPosRankSum=0.229;VQSLOD=0.0947;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.19:0,60,1649	0/0:11,0:11:33.08:0,33,788	0/0:12,0:12:36.12:0,36,910	0/0:12,0:12:26.92:0,27,475	0/0:27,0:27:78.23:0,78,2021	1/1:2,5:7:13.16:638,13,0	0/0:10,0:10:30.09:0,30,837	0/0:30,0:30:75.24:0,75,1880	1/1:6,3:9:24.07:642,24,0	0/0:21,0:21:57.19:0,57,1601	0/0:30,0:30:84.29:0,84,2426	1/1:8,2:10:21.07:705,21,0	0/0:12,0:12:30.10:0,30,832	0/0:17,0:17:51.17:0,51,1430	0/0:14,0:14:39.13:0,39,1171	0/0:16,0:16:39.12:0,39,1056	0/0:11,0:11:30.09:0,30,807	0/0:7,0:7:21.07:0,21,619	0/0:16,0:16:48.16:0,48,1327	0/0:19,0:19:57.18:0,57,1615	0/0:8,0:8:24.08:0,24,694	1/1:7,0:7:9.02:94,9,0	1/1:4,2:6:12.04:411,12,0	1/1:3,0:3:0.10:27,0,0	0/0:17,0:17:51.17:0,51,1381	0/0:21,0:21:60.18:0,60,1598	0/0:24,0:23:69.22:0,69,1851	0/0:9,0:9:27.09:0,27,676
chr10	81325054	.	GA	G	287.48	PASS	AC=4;AF=0.083;AN=48;BaseQRankSum=6.959;DP=607;FS=18.879;HRun=8;HaplotypeScore=72.1839;InbreedingCoeff=0.9936;MQ=56.28;MQ0=6;MQRankSum=-5.917;QD=14.37;ReadPosRankSum=0.346;VQSLOD=1.9784;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.18:0,60,724	0/0:10,0:10:27.08:0,27,326	0/0:28,0:16:48.09:0,48,555	0/0:26,0:18:27.15:0,27,447	0/0:35,0:35:90.28:0,90,1087	./.	0/0:17,0:17:42.12:0,42,496	0/0:26,0:24:57.17:0,57,679	./.	0/0:43,0:43:99:0,123,1485	0/0:22,0:22:66.18:0,66,777	./.	0/0:19,0:19:57.17:0,57,687	0/0:29,0:29:78.23:0,78,925	0/0:32,0:32:96.29:0,96,1159	0/0:22,0:22:60.17:0,60,715	0/0:46,0:46:96.04:0,96,1340	0/0:29,0:29:75.21:0,75,892	0/0:20,0:19:45.14:0,45,544	0/0:37,0:37:99:0,108,1295	0/0:22,0:22:60.17:0,60,714	1/1:1,9:10:24.04:231,24,0	1/1:2,8:10:18.01:173,18,0	./.	0/0:24,0:24:69.21:0,69,833	0/0:26,0:26:72.21:0,72,852	0/0:35,0:35:99:0,102,1231	0/0:14,0:14:42.13:0,42,507
chr10	81325249	.	A	AGGG	27664.19	PASS	AB=0.992;AC=42;AF=0.750;AN=56;BaseQRankSum=-10.234;DP=640;FS=0.344;HRun=0;HaplotypeScore=105.4128;InbreedingCoeff=0.6447;MQ=63.00;MQ0=3;MQRankSum=-5.881;QD=54.24;ReadPosRankSum=3.093;VQSLOD=7.1645;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:30:26.76:27,0,1456	0/0:8,0:8:24.08:0,24,438	0/0:28,0:25:63.19:0,63,1090	0/0:35,0:31:93.23:0,93,1627	1/1:1,35:38:99:2404,102,0	1/1:14,0:14:34.90:381,35,0	1/1:2,23:25:66.23:1624,66,0	1/1:4,26:30:78.27:1899,78,0	1/1:15,0:15:41.62:481,42,0	1/1:2,27:31:90.31:2168,90,0	1/1:2,17:20:51.17:1255,51,0	1/1:9,0:9:27.08:324,27,0	0/0:28,0:28:84.29:0,84,1548	0/0:31,0:31:90.31:0,90,1667	1/1:2,36:40:99:2380,99,0	1/1:2,14:18:36.12:886,36,0	1/1:0,18:21:48.16:1144,48,0	1/1:1,10:11:30.10:739,30,0	1/1:8,15:23:63.17:1429,63,0	1/1:2,35:37:99:2391,105,0	1/1:1,24:26:66.23:1626,66,0	0/1:9,0:9:7.95:97,0,8	0/1:11,0:11:7.95:100,0,8	0/1:3,0:3:11.96:67,0,12	1/1:0,19:20:54.19:1330,54,0	1/1:1,30:32:93.32:2254,93,0	1/1:2,31:34:81.25:1994,81,0	1/1:0,10:10:27.09:664,27,0
chr10	81325251	.	G	GGAC	12169.70	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=14.539;DP=628;FS=2.932;HRun=0;HaplotypeScore=158.8574;InbreedingCoeff=0.8826;MQ=62.15;MQ0=2;MQRankSum=-3.409;QD=24.34;ReadPosRankSum=3.819;VQSLOD=4.5469;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:0.80:1,0,1436	0/0:8,0:8:24.06:0,24,413	0/0:29,0:26:69.18:0,69,1151	0/0:32,0:29:87.29:0,87,1522	1/1:39,0:39:95.88:839,96,0	1/1:1,11:14:36.12:832,36,0	1/1:24,0:24:44.94:627,45,0	1/1:33,0:32:32.12:746,32,0	1/1:0,13:14:42.14:1005,42,0	1/1:31,0:31:87.72:605,88,0	1/1:20,0:20:29.90:436,30,0	1/1:1,9:10:27.09:662,27,0	0/0:29,0:29:87.27:0,87,1554	0/0:30,0:30:90.29:0,90,1618	1/1:39,0:40:98.75:882,99,0	1/1:16,0:16:35.94:333,36,0	1/1:18,0:18:44.96:420,45,0	1/1:12,0:12:12.93:228,13,0	1/1:26,0:24:10.57:456,11,0	1/1:35,0:35:98.67:814,99,0	1/1:22,0:22:65.89:591,66,0	1/1:0,7:8:9.03:221,9,0	1/1:0,10:11:9.03:220,9,0	1/1:1,2:4:6.02:147,6,0	1/1:20,0:20:53.92:492,54,0	1/1:31,0:31:88.82:630,89,0	1/1:33,0:33:60.04:756,60,0	1/1:9,0:9:26.96:230,27,0
chr10	81325270	.	CT	C	1413.17	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.616;DP=588;FS=59.457;HRun=1;HaplotypeScore=141.1042;InbreedingCoeff=0.9666;MQ=61.65;MQ0=0;MQRankSum=-8.617;QD=24.79;ReadPosRankSum=0.012;VQSLOD=-0.6710;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.27:0,81,1243	0/0:6,0:6:18.06:0,18,282	0/0:24,0:23:47.77:0,48,872	0/0:21,0:19:54.14:0,54,758	0/0:36,0:36:99:0,99,1547	1/1:2,8:10:30.02:374,30,0	0/0:21,0:21:62.99:0,63,866	0/0:28,0:27:72.09:0,72,947	1/1:2,12:14:39.04:499,39,0	0/0:35,0:35:99:0,102,1541	0/0:23,0:23:66.22:0,66,1017	1/1:1,7:8:24.04:310,24,0	0/0:30,0:30:90.25:0,90,1342	0/0:25,0:25:75.24:0,75,1148	0/0:39,0:39:99:0,105,1545	0/0:16,0:16:39.08:0,39,568	0/0:17,0:17:48.08:0,48,703	0/0:14,0:14:39.12:0,39,587	0/0:26,0:25:75.21:0,75,1133	0/0:35,0:35:99:0,99,1546	0/0:25,0:25:75.09:0,75,1031	1/1:0,8:8:9.03:119,9,0	1/1:1,9:10:9.03:125,9,0	1/1:0,7:7:12.04:167,12,0	0/0:18,0:18:48.10:0,48,721	0/0:28,0:28:84.27:0,84,1291	0/0:27,0:26:78.20:0,78,1177	0/0:7,0:7:21.07:0,21,328
chr10	81325453	.	AC	A	2152.40	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.100;DP=538;FS=10.470;HRun=1;HaplotypeScore=69.3131;InbreedingCoeff=0.9871;MQ=58.66;MQ0=0;MQRankSum=-6.085;QD=33.11;ReadPosRankSum=2.250;VQSLOD=2.4746;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.20:0,72,1098	0/0:11,0:11:33.11:0,33,525	0/0:24,0:20:54.10:0,54,833	0/0:12,0:12:36.12:0,36,535	0/0:40,0:40:99:0,120,1884	1/1:0,17:17:48.16:668,48,0	0/0:13,0:13:39.13:0,39,622	0/0:38,0:38:99:0,114,1792	1/1:0,11:11:26.98:330,27,0	0/0:27,0:27:81.27:0,81,1269	0/0:30,0:30:90.31:0,90,1434	1/1:0,9:9:27.09:376,27,0	0/0:15,0:15:45.15:0,45,719	0/0:17,0:17:51.14:0,51,764	0/0:14,0:14:39.13:0,39,623	0/0:10,0:10:30.10:0,30,479	0/0:15,0:15:45.05:0,45,615	0/0:22,0:22:63.21:0,63,1005	0/0:18,0:18:54.16:0,54,838	0/0:35,0:35:99:0,105,1643	0/0:10,0:10:30.08:0,30,454	1/1:0,11:11:33.11:460,33,0	1/1:0,11:11:27.09:377,27,0	1/1:0,6:6:9.03:125,9,0	0/0:17,0:17:51.16:0,51,792	0/0:25,0:25:75.23:0,75,1144	0/0:30,0:29:90.31:0,90,1426	0/0:23,0:23:69.16:0,69,971
chr10	81327664	.	A	AT	4705.72	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-14.820;DP=553;FS=3.189;HRun=8;HaplotypeScore=51.7665;InbreedingCoeff=0.9877;MQ=81.78;MQ0=0;MQRankSum=0.155;QD=29.78;ReadPosRankSum=2.443;VQSLOD=5.0044;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,111,1016	0/0:6,0:6:18.01:0,18,164	0/0:19,0:19:41.33:0,41,354	0/0:13,0:13:29.95:0,30,259	0/0:25,0:25:63.03:0,63,577	1/1:4,16:20:51.14:580,51,0	0/0:18,0:18:51.02:0,51,467	0/0:30,0:30:72.01:0,72,648	1/1:0,18:18:45.13:519,45,0	0/0:16,0:16:48.03:0,48,439	0/0:21,0:21:54.01:0,54,490	1/1:1,22:23:66.20:760,66,0	1/1:1,25:26:66.20:762,66,0	1/1:0,17:17:45.13:519,45,0	0/0:17,0:17:42.02:0,42,384	0/0:20,0:20:42.01:0,42,384	0/0:25,0:25:69.04:0,69,631	0/0:12,0:12:36.02:0,36,330	0/0:16,0:16:38.99:0,39,345	0/0:19,0:19:45.01:0,45,412	0/0:24,0:24:37.51:0,38,499	1/1:1,12:13:11.65:388,12,0	1/1:0,19:19:51.15:589,51,0	1/1:4,18:22:51.15:589,51,0	0/0:20,0:20:48.02:0,48,439	0/0:19,0:19:45.01:0,45,412	0/0:30,0:30:87.04:0,87,796	0/0:4,0:4:12.01:0,12,110
chr10	81328411	.	G	GA	15983.17	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=15.106;DP=622;FS=14.738;HRun=1;HaplotypeScore=133.5506;InbreedingCoeff=0.9954;MQ=68.44;MQ0=0;MQRankSum=-5.306;QD=41.19;ReadPosRankSum=-1.109;VQSLOD=2.4327;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.29:0,93,1191	0/0:10,0:10:30.09:0,30,377	0/0:15,0:15:38.77:0,39,424	0/0:5,0:4:12.04:0,12,146	1/1:1,37:38:99:1469,99,0	0/0:19,0:19:54.16:0,54,686	0/0:11,0:11:30.10:0,30,389	1/1:1,41:42:99:1688,117,0	0/0:19,0:19:57.17:0,57,726	1/1:1,36:36:99:1480,102,0	1/1:0,23:23:66.09:935,66,0	0/0:23,0:23:69.19:0,69,848	0/0:24,0:24:72.22:0,72,918	0/0:19,0:19:54.17:0,54,687	1/1:0,25:25:72.18:1050,72,0	1/1:0,19:19:57.19:851,57,0	1/1:0,22:22:60.12:869,60,0	1/1:0,18:18:54.18:807,54,0	1/1:0,18:18:54.18:808,54,0	1/1:1,34:35:96.31:1411,96,0	1/1:0,9:9:27.09:402,27,0	0/0:27,0:27:81.26:0,81,1039	0/0:18,0:18:51.17:0,51,661	0/0:10,0:10:30.10:0,30,389	1/1:1,35:36:96.33:1436,96,0	1/1:0,24:24:69.22:1012,69,0	1/1:0,28:28:84.26:1216,84,0	1/1:0,14:14:39.06:548,39,0
chr10	81329998	.	T	TTTAGAAGTAAC	42446.45	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-6.073;DP=645;FS=54.327;HRun=0;HaplotypeScore=262.9691;InbreedingCoeff=0.9906;MQ=77.17;MQ0=0;MQRankSum=-19.507;QD=128.24;ReadPosRankSum=-1.317;VQSLOD=3.2488;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.28:0,81,2629	0/0:15,0:15:42.14:0,42,1486	0/0:14,0:14:36.11:0,36,1150	0/0:27,0:27:69.16:0,69,1967	1/1:15,23:43:99:5138,105,0	0/0:27,0:27:78.27:0,78,2624	0/0:22,0:22:63.19:0,63,1901	1/1:18,8:29:60.16:2527,60,0	0/0:21,0:21:60.16:0,60,1992	1/1:19,12:33:96.31:4722,96,0	1/1:10,16:27:66.23:3389,66,0	0/0:29,0:29:81.27:0,81,2680	0/0:26,0:26:75.26:0,75,2491	0/0:31,0:31:90.27:0,90,3008	1/1:14,17:33:84.29:4459,84,0	1/1:11,9:20:54.18:2840,54,0	1/1:6,4:10:24.08:1199,24,0	1/1:3,2:6:15.05:608,15,0	1/1:4,1:6:15.05:617,15,0	1/1:13,13:27:78.27:4050,78,0	1/1:5,1:7:12.04:645,12,0	0/0:28,0:28:78.27:0,78,2720	0/0:20,0:20:60.20:0,60,1879	0/0:27,0:27:78.27:0,78,2693	1/1:7,8:18:42.14:2172,42,0	1/1:10,20:31:84.29:4570,84,0	1/1:20,10:32:84.29:4328,84,0	1/1:5,4:9:21.07:1181,21,0
chr10	81330151	.	C	CTG	10714.21	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=16.474;DP=619;FS=27.144;HRun=0;HaplotypeScore=160.8476;InbreedingCoeff=0.9827;MQ=90.73;MQ0=0;MQRankSum=-18.594;QD=39.25;ReadPosRankSum=1.313;VQSLOD=3.3042;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,108,1454	0/0:6,0:6:18.04:0,18,239	0/0:34,0:34:93.26:0,93,1262	0/0:28,0:28:78.20:0,78,1063	1/1:2,19:21:42.10:765,42,0	0/0:20,0:20:57.18:0,57,798	0/0:31,0:31:90.24:0,90,1229	1/1:9,19:28:63.22:1135,63,0	0/0:22,0:22:63.18:0,63,864	1/1:4,22:26:65.94:1174,66,0	1/1:2,9:11:24.08:437,24,0	0/0:32,0:32:90.23:0,90,1229	0/0:30,0:30:84.28:0,84,1202	0/0:35,0:35:96.24:0,96,1281	1/1:5,13:18:33.11:602,33,0	1/1:3,17:20:51.07:892,51,0	1/1:6,14:20:36.12:657,36,0	1/1:2,6:8:18.06:329,18,0	1/1:5,13:18:45.11:746,45,0	1/1:4,22:26:63.22:1149,63,0	1/1:7,14:22:24.03:438,24,0	0/0:24,0:24:60.17:0,60,822	0/0:18,0:18:54.18:0,54,771	0/0:26,0:26:78.24:0,78,1094	1/1:2,9:11:30.10:540,30,0	1/1:3,14:17:42.14:768,42,0	1/1:1,18:20:54.19:973,54,0	1/1:5,2:7:6.02:110,6,0
chr10	81331023	.	T	TG	7361.45	PASS	AB=0.556;AC=29;AF=0.518;AN=56;BaseQRankSum=-8.322;DP=445;FS=1.247;HRun=7;HaplotypeScore=50.3613;InbreedingCoeff=0.9243;MQ=88.25;MQ0=0;MQRankSum=-1.238;QD=29.56;ReadPosRankSum=0.358;VQSLOD=5.2071;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.13:0,87,839	0/0:4,0:4:9.01:0,9,87	0/0:21,0:21:44.23:0,44,408	0/0:13,0:13:33.17:0,33,336	1/1:1,17:18:45.10:527,45,0	0/0:17,0:17:37.47:0,37,373	0/0:12,0:12:30.04:0,30,289	1/1:6,24:30:69.59:780,70,0	0/0:8,0:8:18.02:0,18,174	1/1:0,22:22:63.18:758,63,0	1/1:2,21:23:57.17:689,57,0	0/0:16,0:16:30.04:0,30,290	0/0:17,0:17:48.07:0,48,463	0/0:14,0:14:36.05:0,36,344	1/1:1,5:6:12.04:145,12,0	0/1:2,8:10:7.91:196,0,8	1/1:1,17:18:51.16:616,51,0	1/1:4,9:13:27.08:326,27,0	1/1:1,8:9:26.91:304,27,0	1/1:2,16:18:45.14:543,45,0	1/1:3,23:26:63.19:761,63,0	0/0:16,0:16:42.06:0,42,405	0/0:13,0:13:36.06:0,36,348	0/0:13,0:13:30.04:0,30,289	1/1:0,12:12:36.10:425,36,0	1/1:2,14:16:42.11:494,42,0	1/1:0,16:16:39.12:471,39,0	1/1:3,9:12:27.08:326,27,0
chr10	81331893	.	ATATATATATATG	A	738.12	PASS	AB=1.000;AC=19;AF=0.792;AN=24;BaseQRankSum=0.892;DP=73;FS=5.016;HRun=0;HaplotypeScore=43.3397;InbreedingCoeff=0.0530;MQ=56.43;MQ0=1;MQRankSum=0.192;QD=13.93;ReadPosRankSum=-0.437;VQSLOD=1.0294;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:6:104,6,0	./.	./.	0/1:11,0:4:2.35:6,0,2	./.	1/1:7,0:7:14.95:236,15,0	1/1:3,0:3:3:25,3,0	1/1:3,0:3:3:27,3,0	./.	./.	./.	1/1:3,0:3:6.01:110,6,0	1/1:1,5:6:6.02:185,6,0	./.	./.	./.	0/1:8,0:8:4.98:5,0,463	0/0:9,0:9:2.10:0,2,695	./.	./.	./.	./.	./.	1/1:1,0:1:3.01:85,3,0	./.	./.	1/1:4,0:4:4.81:29,5,0	0/1:3,0:3:13.72:18,0,14
chr10	81331905	.	GTATATATA	G	427.45	PASS	AB=0.833;AC=14;AF=0.538;AN=26;BaseQRankSum=2.066;DP=72;FS=1.545;HRun=0;HaplotypeScore=39.9381;InbreedingCoeff=0.4610;MQ=68.13;MQ0=3;MQRankSum=-1.230;QD=10.43;ReadPosRankSum=-0.209;VQSLOD=1.4981;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:0.17:20,0,0	0/0:1,0:1:3.01:0,3,50	0/0:6,0:1:2.68:0,3,11	0/1:15,0:7:0.30:1,0,0	./.	1/1:7,2:9:15.05:286,15,0	0/1:1,0:2:0:0,0,0	./.	./.	./.	./.	1/1:1,1:2:3.01:71,3,0	1/1:5,0:5:5.99:73,6,0	0/0:1,0:1:1.55:0,2,4	./.	./.	0/0:9,0:9:11.52:0,12,369	0/0:9,0:9:21.07:0,21,557	./.	./.	./.	./.	./.	1/1:1,1:2:3.01:71,3,0	./.	./.	1/1:2,0:2:2.04:6,2,0	./.
chr10	81332715	.	TCACACACACACACA	T	13776.10	PASS	AB=0.638;AC=41;AF=0.732;AN=56;BaseQRankSum=4.054;DP=508;FS=5.404;HRun=0;HaplotypeScore=197.1145;InbreedingCoeff=0.4123;MQ=54.34;MQ0=5;MQRankSum=-4.226;QD=32.04;ReadPosRankSum=1.246;VQSLOD=3.9228;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:21:6.02:195,6,0	0/0:1,0:12:17.79:0,18,611	0/0:21,0:13:3.01:0,3,69	0/0:18,0:10:7.27:0,7,133	1/1:6,22:28:36.12:1417,36,0	0/1:7,0:22:17.29:154,0,17	0/0:10,0:15:15.05:0,15,553	1/1:21,6:25:18.05:272,18,0	0/1:5,0:13:37.02:41,0,37	1/1:10,10:20:24.06:723,24,0	1/1:5,14:19:18.02:610,18,0	1/1:3,0:8:8.83:53,9,0	1/1:7,0:14:9.03:293,9,0	1/1:6,0:20:33.11:1075,33,0	1/1:4,17:21:33.11:1299,33,0	1/1:4,15:20:23.69:923,24,0	1/1:9,14:22:6.02:236,6,0	0/1:5,4:9:74.81:227,0,75	1/1:6,6:12:18.06:574,18,0	1/1:6,12:19:27.98:1044,28,0	1/1:11,0:11:3.01:45,3,0	0/1:9,0:18:76.03:78,0,76	0/1:8,0:21:28.67:96,0,29	0/0:7,0:11:14.96:0,15,166	1/1:8,16:25:33.11:1277,33,0	1/1:11,14:24:33.11:1082,33,0	1/1:10,15:25:30.10:1181,30,0	1/1:2,7:9:26.30:880,26,0
chr10	81333348	.	T	TC	9800.43	PASS	AB=0.545;AC=29;AF=0.518;AN=56;BaseQRankSum=-11.873;DP=523;FS=0.000;HRun=6;HaplotypeScore=88.0390;InbreedingCoeff=0.9252;MQ=91.33;MQ0=0;MQRankSum=-3.653;QD=32.78;ReadPosRankSum=-0.058;VQSLOD=4.5265;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.11:0,48,490	0/0:4,0:4:12.03:0,12,122	0/0:24,0:24:47.29:0,47,512	0/0:18,0:18:41.90:0,42,397	1/1:1,22:23:66.21:830,66,0	0/0:23,0:23:66.12:0,66,660	0/0:14,0:14:39.09:0,39,398	1/1:0,26:26:75.20:914,75,0	0/0:14,0:14:42.08:0,42,421	1/1:2,13:15:39.12:491,39,0	1/1:1,21:22:63.20:790,63,0	0/0:13,0:13:36.04:0,36,347	0/0:15,0:15:42.09:0,42,428	0/0:21,0:21:63.12:0,63,634	1/1:2,18:20:51.16:641,51,0	1/1:2,12:14:36.12:453,36,0	1/1:0,26:26:72.23:906,72,0	1/1:0,7:7:21.07:264,21,0	1/1:3,16:19:48.15:604,48,0	1/1:2,25:27:75.24:943,75,0	1/1:1,11:12:33.11:415,33,0	0/0:25,0:25:72.16:0,72,734	0/0:21,0:21:57.13:0,57,581	0/0:14,0:14:30.07:0,30,306	1/1:1,25:26:63.20:793,63,0	1/1:3,22:25:66.20:818,66,0	1/1:4,27:31:72.70:906,73,0	0/1:1,5:6:16.24:32,0,16
chr10	81334510	.	T	TAA	9957.21	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-13.899;DP=522;FS=5.886;HRun=11;HaplotypeScore=76.0427;InbreedingCoeff=0.9951;MQ=72.70;MQ0=4;MQRankSum=-1.628;QD=30.27;ReadPosRankSum=-3.719;VQSLOD=4.2120;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:10:24.70:0,25,107	0/0:7,0:7:18.02:0,18,175	0/0:19,0:21:23.39:0,23,262	0/0:14,0:13:24.91:0,25,234	1/1:4,21:27:56.63:747,57,0	0/0:3,0:17:35.66:0,36,154	1/1:4,11:16:33.53:440,34,0	1/1:4,17:26:63.35:765,63,0	0/0:2,0:9:19.21:0,19,83	1/1:7,18:29:64.66:830,65,0	1/1:4,24:29:72.20:1008,72,0	0/0:1,0:16:41.16:0,41,178	0/0:0,0:17:43.71:0,44,190	0/0:3,0:23:52.13:0,52,225	1/1:1,9:11:27.09:376,27,0	1/1:3,11:15:29.07:365,29,0	1/1:3,11:17:32.60:442,33,0	1/1:1,14:16:24.08:347,24,0	1/1:5,11:17:44.15:563,44,0	1/1:5,23:30:74.42:970,74,0	1/1:2,6:9:17.55:226,18,0	0/0:4,0:23:49.12:0,49,211	0/0:3,0:26:60.37:0,60,261	0/0:1,0:10:24.69:0,25,107	1/1:4,19:25:51.16:709,51,0	1/1:0,15:17:51.16:708,51,0	1/1:2,25:27:63.21:897,63,0	1/1:1,14:14:39.13:565,39,0
chr10	81337168	.	C	CCA	493.18	PASS	AB=0.571;AC=5;AF=0.089;AN=56;BaseQRankSum=2.024;DP=468;FS=0.000;HRun=0;HaplotypeScore=65.1244;InbreedingCoeff=0.9129;MQ=73.72;MQ0=4;MQRankSum=-2.594;QD=10.96;ReadPosRankSum=-0.207;VQSLOD=3.1900;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:4,12:16:0:0,0,0	0/0:8,0:8:24.03:0,24,282	0/0:29,0:23:20.85:0,21,304	0/0:24,0:19:47.74:0,48,521	0/0:25,0:24:42.12:0,42,512	0/0:15,0:15:33.10:0,33,407	0/0:18,0:18:42.13:0,42,528	0/0:30,0:30:55.75:0,56,671	0/0:16,0:16:36.10:0,36,437	0/0:16,0:16:36.11:0,36,456	0/0:12,0:12:30.56:0,31,366	0/0:11,0:11:26.86:0,27,294	1/1:13,0:13:21.07:292,21,0	1/1:16,0:16:24.07:321,24,0	0/0:13,0:13:32.84:0,33,403	0/0:13,0:13:21.05:0,21,244	0/0:19,0:19:50.81:0,51,574	0/0:11,0:10:17.99:0,18,205	0/0:13,0:13:36.06:0,36,416	0/0:21,0:21:39.09:0,39,456	0/0:16,0:14:39.12:0,39,485	0/0:11,0:11:24.05:0,24,275	0/0:18,0:16:36.07:0,36,433	0/0:18,0:18:51.12:0,51,620	0/0:16,0:16:36.07:0,36,434	0/0:15,0:15:21.06:0,21,253	0/0:18,0:17:36.05:0,36,414	0/0:16,0:16:30.09:0,30,358
chr10	81337180	.	GCTCTCTCT	G	174.74	PASS	AB=0.934;AC=9;AF=0.180;AN=50;BaseQRankSum=1.976;DP=486;FS=0.000;HRun=0;HaplotypeScore=109.5508;InbreedingCoeff=-0.1052;MQ=58.83;MQ0=21;MQRankSum=-0.564;QD=1.12;ReadPosRankSum=0.158;VQSLOD=1.8162;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:3.01:0,3,48	0/0:11,0:11:6.49:0,6,151	./.	./.	1/1:23,0:26:3.01:56,3,0	0/0:18,0:18:12.04:0,12,433	0/1:19,0:19:13.32:13,0,273	0/0:32,0:32:15.99:0,16,107	0/1:11,0:12:49.81:50,0,58	0/0:15,0:16:9.01:0,9,143	./.	0/0:10,0:10:6.02:0,6,167	0/0:12,1:11:7.94:0,8,45	0/1:13,3:16:45.63:57,0,46	0/0:17,0:17:3.01:0,3,119	0/0:8,4:11:0.47:0,0,1	0/1:17,1:19:49.90:50,0,357	0/0:9,0:9:15.03:0,15,217	0/0:22,0:18:6.02:0,6,109	0/0:19,0:18:6.28:0,6,110	0/1:23,0:19:10.96:11,0,434	0/0:8,0:8:3.01:0,3,75	0/0:18,0:15:5.91:0,6,104	0/0:21,0:26:18.06:0,18,624	0/1:18,0:18:15.59:20,0,16	0/0:9,0:9:6:0,6,146	0/1:19,0:19:43.60:44,0,190	0/0:16,0:13:9.03:0,9,309
chr10	81339064	.	AGT	A	251.39	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=3.151;DP=377;FS=1.293;HRun=0;HaplotypeScore=46.7288;InbreedingCoeff=0.5512;MQ=73.25;MQ0=0;MQRankSum=0.219;QD=14.79;ReadPosRankSum=-0.958;VQSLOD=3.2354;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.17:0,57,1116	0/0:5,0:5:15.05:0,15,302	0/0:4,0:4:12.04:0,12,242	0/1:9,0:9:5.98:6,0,389	0/0:27,0:27:81.26:0,81,1605	0/0:26,0:26:78.27:0,78,1584	1/1:0,8:8:21.07:343,21,0	0/0:32,0:32:96.32:0,96,1869	0/0:7,0:7:21.06:0,21,367	0/0:18,0:18:54.17:0,54,1019	0/0:23,0:23:69.22:0,69,1360	0/0:12,0:12:36.09:0,36,658	0/0:6,0:6:18.05:0,18,330	0/0:6,0:6:18.06:0,18,341	0/0:5,0:5:15.05:0,15,302	0/0:15,0:15:45.14:0,45,877	0/0:17,0:17:45.15:0,45,909	0/0:10,0:10:24.08:0,24,487	0/0:20,0:20:60.17:0,60,1114	0/0:17,0:17:48.15:0,48,938	0/0:2,0:2:6.02:0,6,122	0/0:2,0:2:6.02:0,6,120	0/0:9,0:9:27.09:0,27,545	0/0:6,0:6:18.06:0,18,351	0/0:29,0:29:87.26:0,87,1664	0/0:20,0:20:60.20:0,60,1184	0/0:19,0:19:57.20:0,57,1155	0/0:4,0:4:12.04:0,12,244
chr10	81340238	.	CT	C	6173.39	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=8.526;DP=586;FS=0.710;HRun=9;HaplotypeScore=59.6306;InbreedingCoeff=0.9914;MQ=67.39;MQ0=2;MQRankSum=0.503;QD=19.29;ReadPosRankSum=1.846;VQSLOD=5.3538;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,1:36:74.83:0,75,1111	0/0:12,0:12:27.08:0,27,311	0/0:18,0:13:28.32:0,28,302	0/0:19,0:18:39.98:0,40,429	1/1:1,34:35:78.04:712,78,0	0/0:19,0:19:51.14:0,51,578	0/0:1,0:16:33.75:0,34,160	1/1:6,19:24:50.91:445,51,0	0/0:18,0:18:48.13:0,48,543	1/1:3,19:22:57.03:521,57,0	1/1:6,20:26:45.01:411,45,0	0/0:21,1:21:20.74:0,21,491	0/0:24,0:25:57:0,57,637	0/0:21,0:21:54.16:0,54,623	1/1:2,10:12:30.01:275,30,0	1/1:3,18:21:36.01:330,36,0	1/1:4,18:22:48.59:463,49,0	1/1:3,20:23:48.02:439,48,0	1/1:2,10:12:29.75:259,30,0	1/1:5,24:29:52.83:469,53,0	1/1:1,8:9:15.01:137,15,0	0/0:21,0:21:51.15:0,51,584	0/0:25,0:26:69.04:0,69,775	0/0:13,0:13:30.09:0,30,346	1/1:1,21:22:13.45:377,13,0	1/1:5,18:22:50.98:459,51,0	1/1:1,30:31:81.04:741,81,0	1/1:1,7:8:15.01:137,15,0
chr10	81341206	.	TAAA	T	3696.10	PASS	AB=0.750;AC=31;AF=0.554;AN=56;BaseQRankSum=4.609;DP=275;FS=6.473;HRun=14;HaplotypeScore=44.4473;InbreedingCoeff=0.7970;MQ=51.96;MQ0=2;MQRankSum=-0.517;QD=21.36;ReadPosRankSum=2.420;VQSLOD=1.8939;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:19:39.11:0,39,644	0/0:6,0:6:9.03:0,9,169	0/0:7,0:6:17.87:0,18,197	0/0:5,0:2:0:0,0,0	1/1:2,6:9:17.88:175,18,0	0/0:11,0:11:21.06:0,21,364	1/1:4,0:4:2.94:18,3,0	1/1:8,11:18:32.94:358,33,0	0/0:10,0:10:23.99:0,24,344	1/1:1,10:11:30.03:314,30,0	1/1:3,11:15:26.71:262,27,0	0/0:6,0:5:15.01:0,15,231	0/0:13,0:13:36.02:0,36,497	0/0:3,0:3:9.03:0,9,169	1/1:1,9:11:19.62:243,20,0	1/1:0,4:4:3.01:35,3,0	1/1:4,17:21:39.08:455,39,0	1/1:4,5:10:20.97:228,21,0	0/1:4,2:6:12.01:60,0,12	1/1:3,8:12:26.95:298,27,0	1/1:1,6:9:20.92:211,21,0	0/0:8,0:8:23.99:0,24,332	0/0:10,0:11:23.97:0,24,316	0/0:3,0:3:3.01:0,3,56	1/1:5,3:8:8.93:105,9,0	1/1:0,13:13:36.06:409,36,0	1/1:2,13:15:33.09:386,33,0	1/1:1,4:5:11.99:140,12,0
chr10	81341314	.	C	CGT	4715.06	PASS	AB=0.703;AC=27;AF=0.482;AN=56;BaseQRankSum=-7.108;DP=396;FS=1.771;HRun=0;HaplotypeScore=74.2955;InbreedingCoeff=0.5995;MQ=55.15;MQ0=1;MQRankSum=-1.277;QD=19.17;ReadPosRankSum=-0.947;VQSLOD=4.4946;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,17:25:41.81:615,42,0	0/0:2,0:2:3.01:0,3,36	0/0:9,0:5:5.68:0,6,46	0/0:13,0:7:15.04:0,15,162	0/1:7,5:11:0.57:256,0,1	0/0:5,0:24:48.29:0,48,237	0/0:0,0:8:17.04:0,17,84	1/1:26,7:33:37.43:494,37,0	0/0:4,0:13:25.57:0,26,126	1/1:6,10:16:7.92:402,8,0	0/1:5,3:8:8.67:127,0,9	0/0:2,0:9:14.20:0,14,70	0/0:13,0:13:21.06:0,21,250	0/0:15,0:15:30.08:0,30,345	1/1:7,6:13:15.05:232,15,0	1/1:1,6:8:18.06:267,18,0	1/1:9,11:20:23.51:599,24,0	0/1:9,14:23:22.07:424,0,22	1/1:12,7:18:24.06:337,24,0	0/1:8,4:12:6.18:170,0,6	1/1:7,3:11:9.03:139,9,0	0/0:3,0:13:17.04:0,17,84	0/0:3,0:15:25.57:0,26,126	0/0:2,0:16:23.55:0,24,143	1/1:6,2:8:6.02:92,6,0	1/1:7,10:18:24.06:347,24,0	0/1:10,7:17:8.71:169,0,9	1/1:0,3:3:3.01:46,3,0
chr10	81341440	.	GT	G	112.63	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.026;DP=445;FS=2.711;HRun=9;HaplotypeScore=67.1991;InbreedingCoeff=0.7906;MQ=71.89;MQ0=0;MQRankSum=-0.986;QD=10.24;ReadPosRankSum=-1.229;VQSLOD=2.2603;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:38.91:0,39,400	0/0:8,0:8:21.06:0,21,242	0/0:14,0:12:3.86:0,4,196	0/0:10,0:10:9.48:0,9,125	0/0:19,0:19:45.06:0,45,494	0/0:27,0:27:63.08:0,63,672	1/1:3,8:11:23.85:206,24,0	0/0:29,1:31:44.68:0,45,736	0/0:17,0:17:48.14:0,48,554	0/0:17,0:17:48.14:0,48,553	0/0:23,0:23:57.16:0,57,649	0/0:7,0:7:18.05:0,18,208	0/0:17,0:17:48.13:0,48,546	0/0:11,0:11:30.09:0,30,346	0/0:15,0:15:27.08:0,27,309	0/0:19,0:19:48.07:0,48,535	0/0:16,0:16:27.08:0,27,312	0/0:17,0:17:48.14:0,48,553	0/0:24,0:24:57.11:0,57,632	0/0:13,0:13:33.10:0,33,380	0/0:4,0:4:12.04:0,12,138	0/0:9,0:9:23.86:0,24,234	0/0:11,0:11:33.10:0,33,381	0/0:18,0:18:39.07:0,39,435	0/0:20,0:20:30.09:0,30,346	0/0:25,0:25:72.18:0,72,817	0/0:18,0:18:33.06:0,33,366	0/0:7,0:7:21.06:0,21,242
chr10	81341476	.	AGTGTGTGTGTGT	A	8662.84	PASS	AB=0.538;AC=29;AF=0.518;AN=56;BaseQRankSum=3.612;DP=437;FS=2.280;HRun=0;HaplotypeScore=143.3282;InbreedingCoeff=0.8058;MQ=57.96;MQ0=11;MQRankSum=-6.238;QD=35.36;ReadPosRankSum=1.112;VQSLOD=4.5802;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:15:9.03:0,9,469	0/0:2,0:5:12.03:0,12,337	0/0:20,0:10:3.01:0,3,32	0/0:11,0:9:8.98:0,9,76	1/1:6,16:21:29.88:739,30,0	0/0:10,0:25:39.05:0,39,1118	0/0:12,0:12:20.06:0,20,895	1/1:20,0:19:16.64:143,17,0	0/0:7,0:16:24.08:0,24,899	1/1:4,13:17:38.97:868,39,0	1/1:7,14:21:25.09:961,25,0	0/0:1,0:8:18.06:0,18,723	0/0:17,0:17:45.08:0,45,1945	0/0:13,0:15:33.11:0,33,1690	1/1:2,13:17:21.07:691,21,0	1/1:7,10:17:24.08:837,24,0	1/1:3,9:12:6.02:210,6,0	1/1:14,0:15:1.21:198,1,0	1/1:12,9:19:4.38:504,4,0	1/1:2,13:16:17.05:959,17,0	1/1:6,0:6:3:26,3,0	0/0:5,0:15:27.01:0,27,822	0/0:5,0:16:33.08:0,33,1064	0/0:10,0:16:15:0,15,305	0/1:2,11:14:2.12:587,0,2	1/1:7,14:21:30.99:1124,31,0	1/1:3,13:17:11.13:396,11,0	1/1:5,4:7:12.04:419,12,0
chr10	81342397	.	AG	A	4530.31	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=1.528;DP=639;FS=0.390;HRun=1;HaplotypeScore=77.8041;InbreedingCoeff=0.9985;MQ=67.27;MQ0=0;MQRankSum=0.827;QD=39.39;ReadPosRankSum=1.509;VQSLOD=5.4546;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,2275	0/0:10,0:10:30.10:0,30,479	0/0:23,0:22:65.77:0,66,972	0/0:14,0:13:38.55:0,39,499	0/0:33,0:33:99:0,99,1573	1/1:0,18:18:54.18:755,54,0	0/0:19,0:19:57.19:0,57,911	0/0:28,0:28:84.28:0,84,1322	1/1:0,17:17:51.17:713,51,0	0/0:31,0:31:93.31:0,93,1465	0/0:18,0:18:54.18:0,54,863	1/1:0,21:21:63.21:881,63,0	0/0:27,0:27:81.28:0,81,1292	0/0:25,0:25:75.24:0,75,1173	0/0:28,0:27:84.29:0,84,1342	0/0:15,0:15:45.15:0,45,717	0/0:32,0:32:96.33:0,96,1523	0/0:10,0:10:30.10:0,30,479	0/0:26,0:26:78.25:0,78,1216	0/0:37,0:37:99:0,111,1717	0/0:24,0:24:72.23:0,72,1125	1/1:0,10:10:24.08:336,24,0	1/1:0,22:22:51.17:713,51,0	1/1:0,27:27:81.27:1133,81,0	0/0:18,0:18:54.18:0,54,861	0/0:18,0:18:54.18:0,54,863	0/0:31,0:30:90.27:0,90,1410	0/0:7,0:7:21.07:0,21,335
chr10	81344490	.	T	TA	216.86	PASS	AB=0.952;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.348;DP=451;FS=2.535;HRun=9;HaplotypeScore=45.8785;InbreedingCoeff=0.6301;MQ=83.94;MQ0=0;MQRankSum=0.467;QD=6.78;ReadPosRankSum=-1.939;VQSLOD=0.1337;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:23.99:0,24,208	0/0:11,0:11:32.97:0,33,282	0/0:22,0:20:23.20:0,23,211	0/1:19,1:18:23.51:24,0,112	0/0:28,0:29:71.02:0,71,605	0/0:20,0:20:53.96:0,54,465	1/1:2,10:12:27.07:299,27,0	0/0:28,1:29:65.92:0,66,567	0/0:9,0:9:20.99:0,21,182	0/0:19,0:19:53.98:0,54,467	0/0:23,0:23:62.95:0,63,541	0/0:8,0:8:23.97:0,24,203	0/0:13,0:13:35.97:0,36,309	0/0:17,0:17:44.99:0,45,391	0/0:19,0:19:47.97:0,48,413	0/0:9,0:9:23.99:0,24,208	0/0:29,0:29:83.94:0,84,721	0/0:9,0:9:20.99:0,21,182	0/0:12,0:12:32.99:0,33,284	0/0:18,0:18:41.98:0,42,364	0/0:7,0:7:15:0,15,130	0/0:10,0:10:26.99:0,27,234	0/0:13,0:13:32.99:0,33,285	0/0:13,0:13:32.96:0,33,282	0/0:18,0:18:47.99:0,48,417	0/0:18,0:18:47.98:0,48,417	0/0:23,0:23:56.95:0,57,491	0/0:10,0:10:20.99:0,21,182
chr10	81344838	.	AGG	A	8418.75	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=8.161;DP=541;FS=1.184;HRun=10;HaplotypeScore=73.0293;InbreedingCoeff=0.9971;MQ=74.47;MQ0=3;MQRankSum=-2.131;QD=26.15;ReadPosRankSum=5.542;VQSLOD=4.7793;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:48.10:0,48,647	0/0:7,0:7:18.06:0,18,286	0/0:21,0:22:34.13:0,34,608	0/0:16,0:15:19.10:0,19,329	1/1:4,23:27:66.17:735,66,0	0/0:16,0:17:47.64:0,48,698	1/1:3,0:18:24.70:108,25,0	1/1:6,18:24:48.05:516,48,0	0/0:23,0:23:54.14:0,54,788	1/1:1,17:17:48.13:535,48,0	1/1:5,19:21:48.12:535,48,0	0/0:23,0:23:51.13:0,51,742	0/0:25,0:25:51.17:0,51,792	0/0:24,0:24:48.11:0,48,654	1/1:2,25:27:75.20:836,75,0	1/1:0,17:17:51.14:569,51,0	1/1:1,22:23:59.76:668,60,0	1/1:4,11:15:33.08:368,33,0	1/1:2,15:17:48.11:524,48,0	1/1:4,17:21:39.10:433,39,0	1/1:1,17:18:48.13:535,48,0	0/0:13,0:14:32.60:0,33,484	0/0:16,0:17:26.57:0,27,369	0/0:10,0:10:24.08:0,24,381	1/1:0,15:15:33.09:368,33,0	1/1:3,22:25:66.14:719,66,0	1/1:1,15:16:42.11:468,42,0	1/1:2,15:17:45.10:502,45,0
chr10	81345134	.	GCACACACA	G	2779.70	PASS	AB=0.791;AC=22;AF=0.423;AN=52;BaseQRankSum=2.196;DP=591;FS=2.611;HRun=0;HaplotypeScore=216.0016;InbreedingCoeff=0.3945;MQ=51.28;MQ0=6;MQRankSum=-4.611;QD=9.30;ReadPosRankSum=-0.163;VQSLOD=2.7141;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:67.44:0,67,2115	0/0:9,0:9:18.06:0,18,525	0/0:16,0:2:3.01:0,3,44	./.	1/1:8,20:29:3.01:32,3,0	0/0:15,0:15:15.02:0,15,298	0/1:19,0:19:18.36:18,0,25	0/1:21,0:20:1.98:163,0,2	0/0:21,0:23:36.06:0,36,741	1/1:22,3:26:16.20:446,16,0	1/1:15,5:21:0.93:113,1,0	0/0:23,0:25:14.11:0,14,556	0/0:24,0:28:66.22:0,66,2259	0/0:19,0:21:30.10:0,30,894	0/0:10,20:31:3:0,3,25	1/1:10,9:19:11.94:142,12,0	0/1:4,14:20:18.99:291,0,19	1/1:10,6:16:2.39:168,2,0	1/1:9,7:15:7.24:218,7,0	0/1:13,6:22:14.97:100,0,15	0/1:24,1:22:32.24:34,0,32	0/0:19,0:20:12.04:0,12,374	0/0:12,0:10:9.02:0,9,140	0/0:21,0:26:24.02:0,24,492	0/1:7,10:20:5.06:10,0,5	1/1:7,18:26:53.99:935,54,0	1/1:9,4:13:8.99:283,9,0	./.
chr10	81345167	.	CAT	C	578.14	PASS	AB=0.992;AC=14;AF=0.280;AN=50;BaseQRankSum=3.919;DP=682;FS=3.485;HRun=0;HaplotypeScore=175.6124;InbreedingCoeff=0.0927;MQ=43.49;MQ0=20;MQRankSum=1.070;QD=2.02;ReadPosRankSum=0.723;VQSLOD=2.6086;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:46:79.08:0,79,1275	0/0:14,0:14:30.27:0,30,320	0/0:37,0:11:30.31:0,30,205	0/0:45,0:9:13.21:0,13,149	0/1:30,0:30:16.16:16,0,18	0/1:21,1:21:1.33:104,0,1	0/0:17,0:13:6.42:0,6,129	0/0:21,0:16:32.28:0,32,241	1/1:21,1:22:18.07:181,18,0	0/0:22,0:20:4:0,4,104	./.	0/1:26,0:25:3.63:131,0,4	0/0:36,1:37:33.74:0,34,1162	0/0:23,0:22:45.34:0,45,587	./.	0/1:23,0:21:10.80:11,0,46	0/1:23,0:21:12.15:12,0,34	0/0:17,0:15:4.38:0,4,103	0/1:17,0:15:1.49:1,0,124	0/0:20,0:20:5.90:0,6,43	0/0:24,0:16:8.42:0,8,68	0/1:28,0:27:6.91:83,0,7	1/1:23,1:22:13.51:98,14,0	0/1:27,1:26:23.19:37,0,23	0/0:17,0:17:1.25:0,1,3	0/1:30,0:29:39.25:39,0,145	0/1:13,0:11:11.99:12,0,14	./.
chr10	81345175	.	CAGACAGAGACAGAG	C	2133.02	PASS	AB=1.000;AC=19;AF=0.396;AN=48;BaseQRankSum=4.244;DP=668;FS=2.078;HRun=0;HaplotypeScore=228.8046;InbreedingCoeff=0.6733;MQ=41.47;MQ0=26;MQRankSum=-7.211;QD=9.65;ReadPosRankSum=0.569;VQSLOD=2.7128;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:96.30:0,96,2645	0/0:18,0:18:35.79:0,36,1174	0/0:37,0:10:21.07:0,21,301	0/0:44,0:9:15.05:0,15,253	1/1:26,0:26:3.01:49,3,0	0/0:19,0:19:14.97:0,15,339	0/0:17,0:12:17.91:0,18,275	1/1:13,11:16:16.96:357,17,0	0/0:27,0:25:24.06:0,24,393	1/1:17,0:16:30.10:491,30,0	./.	0/0:24,0:23:21.07:0,21,378	0/0:39,0:37:53.91:0,54,1574	0/0:25,0:22:48.16:0,48,1376	./.	1/1:23,0:21:9.03:156,9,0	0/1:22,0:20:3.95:171,0,4	0/1:18,0:15:8.53:154,0,9	1/1:13,0:11:16.25:228,16,0	1/1:16,0:16:2.84:49,3,0	1/1:23,0:14:3.01:75,3,0	0/0:27,0:26:20.96:0,21,355	0/0:24,0:22:12.04:0,12,252	0/0:32,0:29:11.96:0,12,304	./.	0/1:27,0:26:2.50:438,0,2	1/1:11,0:9:8.96:139,9,0	./.
chr10	81345229	.	CAGAGACAG	C	2240.01	PASS	AB=0.805;AC=19;AF=0.380;AN=50;BaseQRankSum=-2.185;DP=589;FS=1.528;HRun=0;HaplotypeScore=146.0020;InbreedingCoeff=0.4534;MQ=41.36;MQ0=49;MQRankSum=-2.909;QD=10.87;ReadPosRankSum=-4.999;VQSLOD=0.4858;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:47:56.54:0,57,1658	0/0:15,0:15:33.11:0,33,802	./.	./.	1/1:10,1:10:6.02:124,6,0	0/0:27,0:25:21.06:0,21,536	1/1:15,0:7:2.80:51,3,0	./.	0/0:40,0:35:31.83:0,32,732	0/1:18,2:14:13.97:452,0,14	0/1:4,13:15:0:0,0,0	0/0:25,0:25:39.13:0,39,948	0/0:38,0:35:63.21:0,63,1796	0/0:24,0:22:39.13:0,39,1272	1/1:17,2:13:19.88:436,20,0	0/1:22,2:19:74.32:213,0,74	0/1:17,0:14:37.04:37,0,89	1/1:13,0:10:8.90:149,9,0	1/1:16,1:6:6.02:152,6,0	0/0:5,11:13:2.75:0,3,84	0/0:21,16:22:3.01:0,3,98	0/0:17,0:17:9.03:0,9,267	0/0:23,0:22:9.03:0,9,187	0/0:27,0:26:23.88:0,24,596	0/0:11,2:10:3.01:0,3,40	1/1:18,3:17:24.08:517,24,0	0/1:9,13:19:31.69:62,0,32	1/1:7,2:6:12.04:215,12,0
chr10	81345235	.	CAG	C	642.98	PASS	AB=0.990;AC=16;AF=0.308;AN=52;BaseQRankSum=4.222;DP=569;FS=0.664;HRun=0;HaplotypeScore=112.1429;InbreedingCoeff=0.3478;MQ=41.88;MQ0=46;MQRankSum=0.537;QD=3.51;ReadPosRankSum=-4.177;VQSLOD=1.2030;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:48:93.26:0,93,1579	0/0:14,0:14:42.14:0,42,740	./.	./.	1/1:10,0:9:7.51:55,8,0	0/0:28,0:27:29.73:0,30,491	1/1:14,1:6:4.24:29,4,0	0/0:27,0:13:9.07:0,9,345	0/0:40,0:34:40.44:0,40,661	0/1:24,0:18:27.49:148,0,27	0/1:16,0:14:0.02:0,0,0	0/0:26,0:26:54.18:0,54,931	0/0:35,0:32:75.18:0,75,1254	0/0:22,0:20:54.18:0,54,942	1/1:20,1:15:21.99:155,22,0	0/1:25,0:20:91.30:105,0,91	0/1:14,1:12:30.22:30,0,87	1/1:11,0:8:3.95:63,4,0	0/1:14,0:4:5.12:5,0,42	0/0:13,0:10:2.74:0,3,53	0/0:32,0:21:4.26:0,4,57	0/0:17,0:17:18.04:0,18,284	0/0:22,0:21:21.04:0,21,304	0/0:26,1:26:33.05:0,33,567	0/0:11,0:8:1.82:0,2,5	0/1:22,0:17:82.57:112,0,83	0/0:21,0:18:0.65:0,1,38	1/1:10,0:7:11.83:96,12,0
chr10	81345339	.	GAC	G	92.16	PASS	AB=0.974;AC=3;AF=0.054;AN=56;BaseQRankSum=5.721;DP=580;FS=13.539;HRun=0;HaplotypeScore=175.5943;InbreedingCoeff=0.5056;MQ=49.62;MQ0=19;MQRankSum=-4.350;QD=1.65;ReadPosRankSum=-3.587;VQSLOD=0.8769;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:63.19:0,63,1167	0/0:10,0:10:30.08:0,30,521	0/0:21,0:4:2.22:0,2,17	0/1:36,1:14:0.08:0,0,249	0/0:26,0:26:46.67:0,47,471	0/0:11,0:10:11.08:0,11,282	1/1:11,7:13:16.16:181,16,0	0/0:43,0:37:90.01:0,90,1661	0/0:20,0:20:17.09:0,17,271	0/0:27,0:24:69.18:0,69,1243	0/0:19,0:19:36.31:0,36,613	0/0:13,0:13:1:0,1,120	0/0:26,0:26:66.10:0,66,1134	0/0:23,0:23:44.51:0,45,843	0/0:13,0:13:24.81:0,25,334	0/0:11,0:11:23.67:0,24,407	0/0:22,0:21:27.81:0,28,522	0/0:5,0:5:11.97:0,12,158	0/0:22,0:17:48.12:0,48,827	0/0:28,0:25:65.81:0,66,1189	0/0:23,1:20:20.47:0,20,356	0/0:16,0:15:19.13:0,19,494	0/0:22,0:22:47.75:0,48,717	0/0:15,0:15:8:0,8,243	0/0:13,0:13:20.76:0,21,358	0/0:32,0:31:78.22:0,78,1424	0/0:19,0:19:48.11:0,48,832	0/0:5,0:5:15.05:0,15,284
chr10	81345343	.	GAGAC	G	194.08	PASS	AB=0.989;AC=8;AF=0.143;AN=56;BaseQRankSum=5.347;DP=597;FS=13.226;HRun=0;HaplotypeScore=200.8773;InbreedingCoeff=0.1597;MQ=46.98;MQ0=21;MQRankSum=-3.999;QD=1.18;ReadPosRankSum=-4.016;VQSLOD=0.6940;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:63.11:0,63,1433	0/0:9,0:9:24.08:0,24,625	0/0:30,0:5:1.31:0,1,34	0/1:45,0:14:26.22:26,0,224	0/0:23,0:23:47.57:0,48,665	0/1:12,0:11:1.63:2,0,309	1/1:11,7:13:17.93:242,18,0	0/1:39,2:36:31.33:31,0,1757	0/0:20,0:20:20.22:0,20,304	0/0:29,0:26:70:0,70,1674	0/0:20,0:20:39.64:0,40,745	0/1:13,0:13:10.64:11,0,61	0/0:27,0:27:60.20:0,60,1477	0/0:23,0:23:38.24:0,38,833	0/0:13,0:13:26.86:0,27,482	0/0:10,0:10:24.05:0,24,551	0/0:18,0:18:24.57:0,25,558	0/0:4,0:4:6.02:0,6,157	0/0:22,0:17:39.13:0,39,861	0/0:29,0:27:60.16:0,60,1422	0/0:24,0:20:20.73:0,21,472	0/1:20,0:19:0.16:0,0,535	0/0:21,0:21:26.77:0,27,724	0/1:15,0:15:2.16:2,0,241	0/0:13,0:13:21.05:0,21,509	0/0:31,0:30:72.24:0,72,1708	0/0:21,0:21:45.14:0,45,1072	0/0:7,0:7:18.06:0,18,419
chr10	81345347	.	CAG	C	86.83	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.228;DP=618;FS=10.664;HRun=0;HaplotypeScore=202.4703;InbreedingCoeff=0.5560;MQ=45.21;MQ0=26;MQRankSum=-4.867;QD=2.99;ReadPosRankSum=-4.673;VQSLOD=-0.2733;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:54.17:0,54,921	0/0:9,0:9:27.08:0,27,450	0/0:38,1:6:2.29:0,2,52	0/0:54,0:14:10.88:0,11,164	0/0:27,0:27:43.68:0,44,407	0/0:13,0:13:1.10:0,1,148	1/1:11,6:13:18.47:176,18,0	0/0:43,0:38:70.13:0,70,1420	0/0:25,0:24:7.80:0,8,171	0/0:31,0:28:77.81:0,78,1239	0/0:20,0:20:29.79:0,30,426	1/1:12,0:12:4.06:12,4,0	0/0:27,0:27:60.04:0,60,1004	0/0:23,0:23:29.45:0,29,496	0/0:12,0:12:24.34:0,24,300	0/0:10,0:10:23.67:0,24,359	0/0:19,0:17:32.08:0,32,402	0/0:4,0:4:6.02:0,6,104	0/0:20,0:15:39.02:0,39,594	0/0:30,0:28:53.77:0,54,898	0/0:22,0:18:17.92:0,18,276	0/0:20,0:20:3.99:0,4,307	0/0:15,0:15:26.96:0,27,440	0/0:14,0:14:2:0,2,143	0/0:14,0:14:20.76:0,21,331	0/0:30,0:28:69.18:0,69,1132	0/0:20,0:20:45.02:0,45,750	0/0:7,0:7:21.02:0,21,306
chr10	81345363	.	GAC	G	92.33	PASS	AB=0.930;AC=8;AF=0.143;AN=56;BaseQRankSum=4.139;DP=710;FS=11.606;HRun=0;HaplotypeScore=236.8232;InbreedingCoeff=0.0900;MQ=41.50;MQ0=43;MQRankSum=-5.027;QD=0.86;ReadPosRankSum=-4.402;VQSLOD=0.5703;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:59.63:0,60,1099	0/0:11,0:11:33.07:0,33,526	0/0:77,0:8:13.91:0,14,183	0/0:99,0:19:21.60:0,22,236	0/0:31,0:31:38.66:0,39,307	0/1:7,2:9:48.61:49,0,79	0/1:20,0:16:2.94:3,0,87	0/0:35,0:32:53.02:0,53,1040	0/1:21,3:23:64.84:65,0,104	0/0:36,0:33:72.10:0,72,906	0/0:25,0:25:20.98:0,21,214	1/1:9,1:10:7.08:48,7,0	0/0:29,0:29:57:0,57,908	0/0:17,0:17:26.45:0,26,498	0/0:12,0:12:21.20:0,21,193	0/0:8,0:8:17.63:0,18,200	0/0:15,0:14:16.87:0,17,262	0/0:4,0:4:5.92:0,6,39	0/0:22,0:18:47.83:0,48,513	0/0:37,0:35:44.85:0,45,534	0/0:23,0:20:20.09:0,20,275	0/1:16,1:17:25.30:25,0,200	0/1:12,1:13:10.58:11,0,153	0/1:14,0:14:22.32:22,0,93	0/0:19,0:19:20.98:0,21,239	0/0:35,0:34:74.25:0,74,827	0/0:20,0:20:41.86:0,42,517	0/0:8,0:8:18.06:0,18,283
chr10	81345369	.	A	AACAGAGAC	6449.37	PASS	AB=0.993;AC=29;AF=0.518;AN=56;BaseQRankSum=-4.773;DP=720;FS=11.888;HRun=0;HaplotypeScore=264.1964;InbreedingCoeff=-0.0709;MQ=40.96;MQ0=43;MQRankSum=-0.396;QD=14.72;ReadPosRankSum=-0.330;VQSLOD=1.6438;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:71.31:0,71,1392	0/0:11,0:11:30.09:0,30,793	0/0:81,0:8:11.58:0,12,229	0/0:103,0:19:13.88:0,14,342	0/1:34,0:34:99:269,0,122	1/1:5,4:9:17.09:356,17,0	0/1:20,0:16:41.71:145,0,42	0/1:31,0:29:99:683,0,107	1/1:5,13:21:20.78:626,21,0	0/1:38,0:36:99:523,0,117	0/1:26,0:26:29.06:305,0,29	1/1:1,6:10:9.03:224,9,0	0/0:26,0:26:61.47:0,61,1160	0/0:19,0:19:36.33:0,36,568	0/1:8,0:8:20.42:20,0,68	0/1:8,0:8:4.82:193,0,5	0/1:16,0:15:69.86:70,0,74	0/1:4,0:4:41.93:42,0,117	0/1:23,0:18:99:212,0,246	1/1:37,0:35:29.94:681,30,0	1/1:22,0:19:15.93:177,16,0	1/1:18,2:22:35.70:734,36,0	0/1:10,0:11:9.46:132,0,9	1/1:14,1:15:11.81:199,12,0	0/1:17,0:17:25.71:201,0,26	0/1:38,0:37:82.77:306,0,83	0/1:19,0:19:25.49:309,0,25	0/1:7,0:7:24.82:42,0,25
chr10	81345376	.	AGT	A	6600.99	PASS	AB=0.706;AC=29;AF=0.518;AN=56;BaseQRankSum=5.551;DP=674;FS=13.815;HRun=0;HaplotypeScore=206.6293;InbreedingCoeff=0.2982;MQ=41.30;MQ0=43;MQRankSum=-4.097;QD=18.23;ReadPosRankSum=-0.815;VQSLOD=3.7223;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:36.48:0,36,784	0/0:11,0:11:30.08:0,30,556	0/0:80,0:8:11.84:0,12,118	0/0:103,0:19:16.41:0,16,215	0/1:6,27:33:30.94:408,0,31	0/0:11,1:12:23.77:0,24,137	1/1:17,2:15:11.81:110,12,0	0/1:13,10:21:99:420,0,387	0/1:17,1:17:21.16:40,0,21	1/1:18,22:37:71.73:997,72,0	1/1:8,19:27:23.11:524,23,0	0/0:7,0:7:7.57:0,8,89	0/0:25,0:25:29.10:0,29,551	0/0:19,0:19:26.13:0,26,406	0/1:0,7:7:15.94:83,0,16	1/1:0,7:7:17.09:226,17,0	0/1:6,6:11:17.70:169,0,18	0/1:3,1:4:23.19:23,0,112	0/1:9,10:16:99:413,0,204	1/1:6,26:32:76.78:961,77,0	1/1:12,4:15:13.30:114,13,0	0/1:15,5:20:27.22:27,0,174	0/1:7,4:10:18.68:48,0,19	0/0:10,6:16:4.02:0,4,106	1/1:2,14:15:7.15:385,7,0	1/1:13,23:35:67.10:861,67,0	1/1:1,16:17:47.95:628,48,0	1/1:1,4:4:12.04:165,12,0
chr10	81345377	.	GTC	G	4720.55	PASS	AB=0.988;AC=34;AF=0.607;AN=56;BaseQRankSum=6.500;DP=669;FS=26.212;HRun=0;HaplotypeScore=212.3192;InbreedingCoeff=0.1308;MQ=41.15;MQ0=44;MQRankSum=-3.710;QD=10.70;ReadPosRankSum=0.447;VQSLOD=2.8861;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:35,3:37:44.73:45,0,485	0/0:10,0:10:30.09:0,30,455	0/0:80,0:8:13.15:0,13,146	0/0:104,0:19:30.27:0,30,244	0/1:33,0:33:73.06:305,0,73	0/0:9,3:12:8.53:0,9,52	1/1:19,0:15:9.39:70,9,0	0/1:23,0:21:99:233,0,374	1/1:16,0:15:11.05:79,11,0	1/1:39,0:36:68.93:600,69,0	1/1:27,0:27:16.63:433,17,0	0/0:7,0:7:0.45:0,0,74	0/1:25,0:25:64.51:65,0,324	0/1:19,0:19:17.42:17,0,220	0/1:7,0:7:24.74:60,0,25	1/1:7,0:7:15.02:142,15,0	0/1:13,0:12:20.47:134,0,20	0/1:4,0:4:19.72:20,0,94	0/1:19,0:16:99:225,0,169	1/1:33,0:33:75.12:741,75,0	1/1:15,1:15:8.50:60,9,0	0/1:20,1:21:19.11:19,0,86	1/1:9,2:10:4.65:55,5,0	0/0:15,0:15:9.85:0,10,48	1/1:16,0:15:3.58:331,4,0	1/1:34,0:33:65.91:557,66,0	1/1:16,0:16:45.03:425,45,0	1/1:5,0:4:11.99:104,12,0
chr10	81345379	.	CAGAGAGAGAGAGAGAG	C	8549.93	PASS	AB=0.940;AC=22;AF=0.407;AN=54;BaseQRankSum=-4.429;DP=669;FS=9.513;HRun=0;HaplotypeScore=284.1253;InbreedingCoeff=0.2822;MQ=39.81;MQ0=44;MQRankSum=-0.790;QD=29.18;ReadPosRankSum=-7.010;VQSLOD=0.9707;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:35:34.40:0,34,1077	0/0:10,0:10:24.08:0,24,1116	./.	0/0:105,0:18:15.84:0,16,294	1/1:28,6:34:42.11:1002,42,0	0/0:7,0:12:17.29:0,17,246	0/1:20,0:16:24.92:25,0,25	0/0:23,0:21:0:0,0,0	0/0:12,0:15:7.14:0,7,174	0/1:26,13:36:99:940,0,180	1/1:19,8:27:39.08:1144,39,0	0/0:7,0:8:3.80:0,4,83	0/0:7,0:24:46.64:0,47,861	0/0:8,0:18:18.78:0,19,320	1/1:7,0:7:11.99:268,12,0	0/1:9,0:9:13.79:209,0,14	0/1:14,0:13:48.35:164,0,48	1/1:4,0:4:3:107,3,0	0/1:19,0:16:3.03:105,0,3	1/1:26,8:34:36.33:1683,36,0	1/1:16,0:15:7.71:163,8,0	0/0:13,0:22:2.45:0,2,159	0/0:9,0:9:7.99:0,8,79	0/0:7,0:14:10.97:0,11,161	1/1:15,0:14:30.06:958,30,0	0/1:24,10:33:99:1030,0,232	0/1:16,0:16:99:626,0,186	0/1:5,0:4:15.46:126,0,15
chr10	81345395	.	G	GTC	4671.96	PASS	AB=0.993;AC=22;AF=0.393;AN=56;BaseQRankSum=3.237;DP=622;FS=4.471;HRun=0;HaplotypeScore=193.2294;InbreedingCoeff=0.3833;MQ=39.96;MQ0=33;MQRankSum=-2.351;QD=16.28;ReadPosRankSum=1.118;VQSLOD=4.5427;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:41.74:0,42,366	0/0:9,0:9:27.09:0,27,412	0/0:46,0:5:12.04:0,12,183	0/0:78,0:14:36.01:0,36,482	0/1:33,0:33:99:251,0,108	0/0:16,0:15:34.32:0,34,323	0/0:23,0:19:14.81:0,15,127	0/1:14,0:13:96.44:262,0,96	0/0:16,0:15:29.33:0,29,288	1/1:35,0:31:9.98:739,10,0	0/1:26,0:26:8.04:284,0,8	0/0:9,0:9:15.03:0,15,184	0/0:28,0:28:68.43:0,68,671	0/0:18,0:18:29.96:0,30,323	0/1:9,0:9:32.50:145,0,32	1/1:6,5:11:12.02:134,12,0	0/1:16,1:17:99:120,0,99	0/1:7,0:7:61.51:134,0,62	0/1:16,0:12:12.33:137,0,12	1/1:31,0:31:53.08:610,53,0	1/1:18,0:17:13.68:200,14,0	0/0:26,0:26:40.79:0,41,488	0/0:9,0:8:12.04:0,12,161	0/0:20,0:19:22.85:0,23,264	1/1:16,0:15:4.21:363,4,0	1/1:30,0:29:52.45:768,52,0	0/1:17,0:16:5.32:337,0,5	1/1:7,0:6:17.83:187,18,0
chr10	81345405	.	GAGAGAGAGAGAA	G	1744.79	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=8.166;DP=601;FS=2.901;HRun=0;HaplotypeScore=262.2128;InbreedingCoeff=-0.1503;MQ=42.27;MQ0=16;MQRankSum=-8.076;QD=6.41;ReadPosRankSum=8.366;VQSLOD=1.7006;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:65.31:0,65,1079	0/0:7,0:7:21.01:0,21,722	0/0:27,0:10:23.11:0,23,366	0/0:49,0:11:30.09:0,30,609	0/1:33,0:33:99:226,0,225	0/0:20,0:19:44.83:0,45,799	1/1:3,14:16:10.27:363,10,0	0/0:17,0:16:44.86:0,45,425	0/0:17,0:16:35.71:0,36,637	0/1:40,0:36:11.93:12,0,812	0/1:28,0:28:62.38:298,0,62	0/0:12,0:12:27.02:0,27,343	0/0:26,0:26:62.06:0,62,866	0/0:21,0:21:38.42:0,38,454	0/1:11,0:10:51.12:51,0,84	0/1:13,0:13:11.53:12,0,228	0/0:19,0:19:32.06:0,32,332	0/1:6,0:6:21.44:21,0,73	0/0:19,0:17:37.46:0,37,355	0/1:33,0:33:99:420,0,197	0/1:16,0:16:17.33:17,0,73	0/0:26,0:26:54.35:0,54,779	0/0:12,0:11:26.65:0,27,295	0/0:19,0:18:30.03:0,30,532	0/1:15,0:14:93.93:284,0,94	0/1:35,0:34:57.07:57,0,664	0/1:18,0:17:99:120,0,307	0/1:7,0:6:23.29:23,0,199
chr10	81346633	.	G	GGT	7175.18	PASS	AB=0.596;AC=29;AF=0.518;AN=56;BaseQRankSum=0.647;DP=660;FS=0.394;HRun=0;HaplotypeScore=114.9636;InbreedingCoeff=0.8859;MQ=68.40;MQ0=18;MQRankSum=-0.746;QD=21.35;ReadPosRankSum=-2.618;VQSLOD=4.1124;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:84.72:0,85,1012	0/0:11,0:11:21.07:0,21,255	0/0:34,0:19:20.95:0,21,210	0/0:37,0:19:22.83:0,23,289	1/1:20,8:29:14.84:600,15,0	0/0:29,0:28:36.81:0,37,379	0/0:22,0:22:9.65:0,10,85	1/1:27,0:26:48.88:615,49,0	0/0:16,0:16:31.91:0,32,367	1/1:15,2:18:25.93:329,26,0	1/1:13,7:20:29.92:442,30,0	0/0:16,0:16:23.37:0,23,235	0/0:20,0:21:41.93:0,42,457	0/0:20,0:20:45.12:0,45,531	1/1:6,18:25:25.33:389,25,0	0/1:9,19:28:9.49:325,0,9	1/1:14,11:25:21:277,21,0	1/1:6,9:15:23.66:318,24,0	1/1:13,9:22:36.55:492,37,0	1/1:21,6:26:35.94:518,36,0	1/1:25,6:28:59.94:838,60,0	0/0:23,0:23:36.50:0,37,394	0/0:20,0:20:6.40:0,6,296	0/0:31,0:31:52.32:0,52,499	1/1:11,8:19:33.10:495,33,0	1/1:21,5:26:38.43:987,38,0	1/1:18,2:20:36.06:502,36,0	1/1:1,2:3:3.01:48,3,0
chr10	81346650	.	A	ATG	5072.29	PASS	AB=0.762;AC=35;AF=0.625;AN=56;BaseQRankSum=0.880;DP=650;FS=16.652;HRun=0;HaplotypeScore=117.7305;InbreedingCoeff=0.1726;MQ=57.30;MQ0=20;MQRankSum=-1.088;QD=9.59;ReadPosRankSum=2.198;VQSLOD=3.5496;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:43:58.45:0,58,536	0/0:8,0:8:12.03:0,12,137	0/0:27,0:11:8.94:0,9,76	0/1:36,0:15:2.08:2,0,14	0/1:18,17:35:98.21:283,0,98	0/1:14,15:28:10.13:299,0,10	1/1:22,0:22:13.23:84,13,0	0/1:27,0:27:72.49:213,0,72	0/1:12,7:19:42.74:124,0,43	0/1:11,7:18:2.70:315,0,3	1/1:11,9:22:10.11:138,10,0	1/1:9,7:16:7.94:137,8,0	0/0:17,0:17:24.06:0,24,262	0/0:26,0:26:45.83:0,46,482	1/1:15,5:20:24.74:342,25,0	0/1:20,5:25:28.79:269,0,29	1/1:17,3:20:17.41:176,17,0	1/1:13,5:17:8.17:364,8,0	1/1:19,0:19:17:154,17,0	0/1:12,8:21:3.44:212,0,3	1/1:27,7:31:11.04:319,11,0	0/1:11,14:26:12.90:253,0,13	0/1:12,6:19:14.97:274,0,15	0/1:15,13:30:22.07:393,0,22	1/1:7,11:20:16.66:254,17,0	1/1:28,1:32:40.34:288,40,0	1/1:15,2:17:9.03:134,9,0	1/1:2,1:3:3.01:46,3,0
chr10	81346658	.	G	GTGTGTA	396.15	PASS	AB=0.937;AC=7;AF=0.125;AN=56;BaseQRankSum=9.260;DP=640;FS=3.673;HRun=0;HaplotypeScore=175.3416;InbreedingCoeff=-0.1409;MQ=54.67;MQ0=20;MQRankSum=-1.075;QD=2.28;ReadPosRankSum=7.809;VQSLOD=1.9289;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:47:99:0,107,1469	0/0:7,0:7:15.04:0,15,295	0/0:28,0:12:24.23:0,24,252	0/0:34,0:11:22.14:0,22,171	0/1:36,0:36:16.35:16,0,468	0/0:28,0:27:45.62:0,46,335	0/1:5,19:24:20.44:246,0,20	0/0:27,0:27:65.31:0,65,547	0/0:19,0:19:31.83:0,32,291	0/0:17,0:17:27.15:0,27,230	0/1:21,0:21:5.42:5,0,119	0/0:15,0:15:25.93:0,26,180	0/0:16,0:16:36.03:0,36,556	0/0:23,0:23:55.65:0,56,963	0/0:19,0:19:1.46:0,1,211	0/1:22,0:22:1.67:2,0,209	0/1:20,0:20:1.03:1,0,75	0/0:20,0:19:16.11:0,16,234	0/0:20,0:20:55.55:0,56,386	0/0:26,0:25:7:0,7,240	0/0:33,0:30:15.39:0,15,339	0/0:25,0:25:49.51:0,50,381	0/0:17,0:17:16.54:0,17,283	0/0:28,0:28:59.38:0,59,488	0/1:20,0:20:28.62:29,0,106	0/1:31,0:31:99:210,0,302	0/0:13,0:13:14.22:0,14,116	0/0:4,0:4:1.91:0,2,33
chr10	81348092	.	A	ATCCCCCTAACCCC	617.63	PASS	AB=0.952;AC=5;AF=0.089;AN=56;BaseQRankSum=2.338;DP=574;FS=1.475;HRun=0;HaplotypeScore=213.4159;InbreedingCoeff=0.3190;MQ=60.89;MQ0=1;MQRankSum=-4.212;QD=8.35;ReadPosRankSum=-2.225;VQSLOD=2.3429;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,3755	0/0:9,0:9:24.08:0,24,884	0/0:16,0:15:27.09:0,27,778	0/0:20,0:11:23.74:0,24,557	0/0:23,0:23:57.19:0,57,2159	0/0:12,0:12:33.10:0,33,1187	1/1:5,8:14:12.04:458,12,0	0/0:27,0:26:54.14:0,54,1576	0/0:22,0:22:60.19:0,60,1993	0/1:20,0:20:35.32:35,0,1835	0/0:15,0:15:33.11:0,33,1226	0/0:17,0:16:42.13:0,42,1423	0/0:24,0:24:63.20:0,63,2200	0/0:27,0:27:81.24:0,81,2740	0/0:28,0:28:65.93:0,66,2187	0/0:20,0:20:51.15:0,51,1667	0/1:19,0:20:99:124,0,1759	0/0:21,0:21:54.15:0,54,1898	0/0:13,0:11:21.06:0,21,654	0/0:23,0:23:60.18:0,60,2076	0/0:17,0:17:48.16:0,48,1767	0/0:24,0:24:54.19:0,54,2066	0/0:22,0:22:54.19:0,54,1979	0/1:17,0:19:99:120,0,1801	0/0:22,0:22:53.77:0,54,1903	0/0:23,0:23:60.20:0,60,2122	0/0:27,0:27:75.26:0,75,2796	0/0:9,0:9:27.09:0,27,1046
chr10	81349063	.	CA	C	2514.07	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-0.286;DP=626;FS=12.342;HRun=12;HaplotypeScore=89.1362;InbreedingCoeff=0.9365;MQ=61.50;MQ0=9;MQRankSum=0.178;QD=12.15;ReadPosRankSum=4.739;VQSLOD=2.1684;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,24:40:34.29:440,34,0	0/0:10,1:11:9.83:0,10,281	0/0:10,0:6:15.91:0,16,151	0/0:10,0:8:20.84:0,21,175	0/0:20,0:21:56.90:0,57,545	1/1:3,16:19:20.35:341,20,0	1/1:6,0:22:29.20:89,29,0	0/0:33,1:38:57.13:0,57,671	1/1:6,18:25:16.41:300,16,0	0/0:30,2:34:22.24:0,22,533	0/0:18,2:19:9.82:0,10,276	1/1:3,23:25:50.35:394,50,0	0/0:22,0:22:43.60:0,44,416	0/0:15,1:16:15.67:0,16,315	0/0:22,2:24:39.83:0,40,563	0/0:10,0:10:17.99:0,18,166	0/0:29,0:29:80.98:0,81,799	0/0:25,3:27:6.09:0,6,482	0/0:22,2:28:45.21:0,45,563	0/0:24,3:26:16.54:0,17,501	0/0:11,0:10:23.98:0,24,231	1/1:1,14:16:34.88:261,35,0	1/1:6,17:23:38.78:302,39,0	1/1:6,28:36:81.01:592,81,0	0/0:25,1:27:48.72:0,49,652	0/0:25,0:25:60.03:0,60,587	0/0:14,2:15:7.29:0,7,252	0/0:9,0:9:12.01:0,12,115
chr10	81349866	.	T	TC	336.79	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.496;DP=600;FS=0.000;HRun=0;HaplotypeScore=65.0590;InbreedingCoeff=0.9789;MQ=73.43;MQ0=0;MQRankSum=-4.466;QD=18.71;ReadPosRankSum=0.419;VQSLOD=5.5750;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.19:0,72,952	0/0:11,0:11:33.11:0,33,462	0/0:15,0:15:30.81:0,31,492	0/0:17,0:17:46.24:0,46,577	0/0:35,0:35:99:0,99,1384	0/0:27,0:26:81.25:0,81,1111	1/1:8,10:18:14.01:424,14,0	0/0:33,0:33:93.27:0,93,1225	0/0:25,0:25:75.25:0,75,1049	0/0:28,0:28:84.27:0,84,1161	0/0:26,0:26:78.26:0,78,1090	0/0:12,0:12:36.12:0,36,504	0/0:16,0:16:48.13:0,48,637	0/0:16,0:16:48.16:0,48,671	0/0:18,0:18:51.17:0,51,712	0/0:22,0:22:63.18:0,63,845	0/0:25,0:25:75.21:0,75,1005	0/0:15,0:15:39.10:0,39,525	0/0:21,0:21:63.21:0,63,880	0/0:28,0:28:84.28:0,84,1174	0/0:19,0:19:57.19:0,57,796	0/0:21,0:21:63.21:0,63,881	0/0:21,0:21:63.21:0,63,879	0/0:17,0:17:51.15:0,51,695	0/0:26,0:26:75.24:0,75,1033	0/0:26,0:26:78.25:0,78,1075	0/0:24,0:24:69.22:0,69,945	0/0:14,0:14:39.13:0,39,545
chr10	81350615	.	GAAAAA	G	9523.42	PASS	AB=0.617;AC=42;AF=0.750;AN=56;BaseQRankSum=1.276;DP=560;FS=8.516;HRun=18;HaplotypeScore=118.9918;InbreedingCoeff=0.8186;MQ=70.94;MQ0=3;MQRankSum=-2.702;QD=21.74;ReadPosRankSum=5.465;VQSLOD=1.6788;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:20:20.90:0,21,408	0/0:6,0:10:25.85:0,26,544	0/0:38,0:20:32.07:0,32,494	0/0:29,0:18:14.54:0,15,160	1/1:9,19:31:34.43:689,34,0	1/1:4,14:21:37.31:455,37,0	0/1:8,1:19:6.94:84,0,7	1/1:17,22:42:32.87:813,33,0	0/1:4,7:12:0.65:263,0,1	1/1:4,11:15:26.71:377,27,0	1/1:6,8:17:30.72:327,31,0	1/1:2,11:13:23.92:349,24,0	0/0:15,0:17:33.11:0,33,805	0/0:6,0:6:15.05:0,15,341	1/1:4,18:25:42.53:570,43,0	1/1:6,14:21:41.07:542,41,0	1/1:4,7:13:8.02:307,8,0	1/1:4,2:6:8.79:130,9,0	1/1:10,8:20:16.09:339,16,0	1/1:5,29:35:61.89:861,62,0	1/1:3,14:17:25.49:377,25,0	1/1:8,12:22:34.73:473,35,0	1/1:7,13:23:36.85:454,37,0	1/1:1,7:8:14.88:218,15,0	1/1:5,11:18:34.80:453,35,0	1/1:9,18:27:47.28:676,47,0	1/1:9,17:28:49.32:651,49,0	1/1:1,2:4:8.90:116,9,0
chr10	81350830	.	G	GC	15135.45	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-17.549;DP=691;FS=0.283;HRun=3;HaplotypeScore=61.1370;InbreedingCoeff=0.9998;MQ=91.80;MQ0=0;MQRankSum=-3.275;QD=38.81;ReadPosRankSum=1.439;VQSLOD=5.0475;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.17:0,57,684	0/0:12,0:12:36.10:0,36,421	0/0:26,0:26:69.09:0,69,793	0/0:31,0:31:84.14:0,84,973	1/1:1,36:37:99:1443,106,0	0/0:37,0:37:99:0,105,1260	1/1:0,16:16:42.14:588,42,0	1/1:3,34:37:99:1409,102,0	0/0:23,0:23:69.21:0,69,827	1/1:0,27:27:81.27:1134,81,0	1/1:1,31:32:87.29:1217,87,0	0/0:19,0:19:57.17:0,57,684	0/0:25,0:25:75.23:0,75,900	0/0:25,0:25:69.21:0,69,828	1/1:0,24:24:63.21:882,63,0	1/1:1,26:27:42.26:1012,42,0	1/1:1,22:23:66.22:923,66,0	1/1:0,13:13:39.10:525,39,0	1/1:2,16:18:48.16:671,48,0	1/1:1,22:23:69.23:957,69,0	1/1:2,16:18:48.16:672,48,0	0/0:30,0:30:87.27:0,87,1044	0/0:26,0:26:75.23:0,75,900	0/0:27,0:27:72.22:0,72,863	1/1:3,17:20:51.13:692,51,0	1/1:0,30:30:90.30:1259,90,0	1/1:0,34:35:99:1374,99,0	1/1:0,10:10:27.09:378,27,0
chr10	81352414	.	TATATATATATATATATGTAATATATATATAAC	T	641.23	PASS	AB=1.000;AC=9;AF=0.375;AN=24;BaseQRankSum=0.718;DP=83;FS=1.871;HRun=0;HaplotypeScore=48.0607;InbreedingCoeff=0.2989;MQ=55.38;MQ0=14;MQRankSum=-0.718;QD=22.90;ReadPosRankSum=2.079;VQSLOD=1.4638;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:13,0:3:2.68:0,3,11	0/0:29,0:6:4.57:0,5,90	./.	./.	0/0:1,0:1:3.01:0,3,164	0/1:7,0:7:54.88:96,0,55	0/0:1,0:1:2.90:0,3,16	0/0:1,0:1:2.68:0,3,11	./.	./.	./.	./.	./.	./.	1/1:3,0:2:3.01:102,3,0	1/1:5,0:4:12.03:251,12,0	0/0:1,0:1:0.47:0,0,1	./.	0/0:2,0:2:0:0,0,0	./.	./.	./.	1/1:1,6:7:5.98:269,6,0	./.	./.	1/1:6,0:2:2.94:18,3,0
chr10	81352430	.	TGTA	T	259.47	PASS	AB=0.767;AC=11;AF=0.423;AN=26;BaseQRankSum=0.598;DP=90;FS=7.501;HRun=0;HaplotypeScore=25.5945;InbreedingCoeff=0.4048;MQ=80.21;MQ0=11;MQRankSum=-1.858;QD=12.36;ReadPosRankSum=1.795;VQSLOD=1.4543;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:5.61:0,6,74	0/0:2,0:2:6.02:0,6,129	0/0:23,0:9:9.85:0,10,85	0/0:34,0:8:7.26:0,7,93	0/0:1,1:2:0:0,0,0	./.	0/0:2,0:2:6.02:0,6,125	1/1:1,4:4:12.02:182,12,0	./.	0/1:1,0:1:0:0,0,0	./.	./.	./.	./.	./.	./.	1/1:0,2:2:3.01:52,3,0	0/1:3,1:4:9.88:50,0,10	1/1:0,1:1:3.01:54,3,0	./.	0/1:0,1:1:0:0,0,0	./.	./.	./.	1/1:7,0:7:2.98:21,3,0	./.	./.	./.
chr10	81352443	.	TAAC	T	792.51	PASS	AC=22;AF=0.611;AN=36;BaseQRankSum=1.630;DP=113;FS=3.462;HRun=0;HaplotypeScore=22.4574;InbreedingCoeff=0.5738;MQ=83.26;MQ0=12;MQRankSum=-1.656;QD=25.56;ReadPosRankSum=0.874;VQSLOD=2.8798;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:8.74:0,9,150	0/0:5,0:5:15.05:0,15,339	0/0:26,0:10:8.75:0,9,91	0/0:37,0:9:8.87:0,9,137	1/1:0,1:2:3:52,3,0	./.	0/0:3,0:3:9.03:0,9,205	1/1:0,4:5:15.04:231,15,0	./.	1/1:0,0:1:3.01:52,3,0	1/1:0,0:3:9.03:141,9,0	1/1:1,0:1:3.01:47,3,0	0/0:1,0:1:3.01:0,3,48	0/0:2,0:2:6.02:0,6,126	1/1:0,1:3:3.01:52,3,0	./.	1/1:1,2:3:6.02:90,6,0	1/1:1,1:2:6.02:101,6,0	1/1:0,1:2:6.02:88,6,0	./.	1/1:1,1:2:2.86:50,3,0	./.	./.	./.	1/1:6,0:6:3:25,3,0	./.	./.	./.
chr10	81352550	.	TA	T	9420.02	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=5.861;DP=357;FS=2.617;HRun=2;HaplotypeScore=37.6777;InbreedingCoeff=0.9640;MQ=86.12;MQ0=1;MQRankSum=-3.052;QD=32.82;ReadPosRankSum=0.947;VQSLOD=4.3567;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:48.16:0,48,686	0/0:5,0:5:15.05:0,15,215	0/0:12,0:13:34.03:0,34,431	0/0:11,0:10:8.26:0,8,282	1/1:0,12:12:30.06:371,30,0	1/1:0,13:13:30.10:389,30,0	1/1:0,8:8:21.07:272,21,0	1/1:0,19:19:54.10:638,54,0	1/1:0,8:8:15.05:194,15,0	1/1:0,23:23:69.21:874,69,0	1/1:0,12:12:36.07:447,36,0	1/1:0,17:17:45.15:583,45,0	0/0:13,0:13:39.13:0,39,560	0/0:9,0:9:21.07:0,21,297	1/1:0,12:12:27.09:350,27,0	1/1:0,4:4:9.03:117,9,0	1/1:2,9:11:30.05:369,30,0	1/1:0,13:13:33.11:426,33,0	1/1:0,8:8:24.08:308,24,0	1/1:0,18:18:48.05:568,48,0	1/1:0,12:12:30.10:388,30,0	1/1:1,17:18:39.08:486,39,0	1/1:0,8:8:20.93:272,21,0	1/1:0,14:14:33.11:427,33,0	1/1:0,14:14:33.11:428,33,0	1/1:0,16:16:48.16:622,48,0	1/1:1,15:16:42.14:544,42,0	1/1:0,11:11:27.09:349,27,0
chr10	81353592	.	C	CT	409.45	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.213;DP=519;FS=2.415;HRun=3;HaplotypeScore=51.1997;InbreedingCoeff=0.9942;MQ=83.54;MQ0=0;MQRankSum=-1.764;QD=34.12;ReadPosRankSum=-1.042;VQSLOD=3.5331;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.10:0,45,513	0/0:12,0:12:36.11:0,36,432	0/0:16,0:16:41.69:0,42,515	0/0:15,0:15:38.87:0,39,440	0/0:21,0:21:57.17:0,57,684	0/0:19,0:19:54.17:0,54,648	1/1:0,12:12:36.12:504,36,0	0/0:33,0:33:90.24:0,90,1043	0/0:19,0:19:51.16:0,51,612	0/0:27,0:27:81.25:0,81,972	0/0:24,0:24:66.19:0,66,781	0/0:16,0:16:48.11:0,48,542	0/0:24,0:24:69.19:0,69,814	0/0:16,0:16:45.14:0,45,540	0/0:15,0:15:39.12:0,39,468	0/0:13,0:13:39.12:0,39,468	0/0:19,0:19:48.15:0,48,576	0/0:13,0:13:33.10:0,33,396	0/0:17,0:17:48.15:0,48,576	0/0:30,0:30:84.25:0,84,999	0/0:19,0:19:51.14:0,51,601	0/0:15,0:15:42.13:0,42,503	0/0:18,0:18:51.14:0,51,600	0/0:10,0:10:30.09:0,30,359	0/0:17,0:17:51.14:0,51,599	0/0:11,0:11:33.09:0,33,386	0/0:41,0:41:99:0,120,1428	0/0:10,0:10:20.90:0,21,250
chr10	81354518	.	A	AC	553.24	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.535;DP=629;FS=3.633;HRun=2;HaplotypeScore=76.7664;InbreedingCoeff=0.9380;MQ=85.51;MQ0=0;MQRankSum=-2.264;QD=30.74;ReadPosRankSum=0.226;VQSLOD=3.2083;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.20:0,63,781	0/0:14,0:14:39.12:0,39,483	0/0:25,0:25:63.19:0,63,769	0/0:22,0:22:52.37:0,52,615	0/0:32,0:32:96.25:0,96,1159	0/0:23,0:23:69.20:0,69,843	1/1:0,18:18:45.15:648,45,0	0/0:31,0:31:90.28:0,90,1116	0/0:27,0:27:81.24:0,81,991	0/0:36,0:36:99:0,105,1276	0/0:25,0:25:75.24:0,75,930	0/0:20,0:20:60.19:0,60,744	0/0:19,0:19:57.18:0,57,705	0/0:20,0:20:57.18:0,57,707	0/0:28,0:28:81.23:0,81,980	0/0:27,0:27:81.25:0,81,1004	0/0:16,0:15:45.13:0,45,544	0/0:7,0:7:18.06:0,18,223	0/0:20,0:20:60.19:0,60,744	0/0:27,0:27:78.24:0,78,956	0/0:17,0:17:51.16:0,51,632	0/0:19,0:19:57.17:0,57,694	0/0:16,0:16:45.14:0,45,558	0/0:20,0:20:60.19:0,60,742	0/0:24,0:24:69.20:0,69,841	0/0:28,0:28:81.25:0,81,1004	0/0:42,0:42:99:0,123,1512	0/0:4,0:4:9.03:0,9,112
chr10	81355341	.	CTACTAAA	C	15327.57	PASS	AB=0.929;AC=31;AF=0.554;AN=56;BaseQRankSum=13.795;DP=517;FS=4.651;HRun=0;HaplotypeScore=146.4067;InbreedingCoeff=0.8997;MQ=72.22;MQ0=0;MQRankSum=-14.421;QD=52.49;ReadPosRankSum=-1.132;VQSLOD=4.5654;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.21:0,60,2287	0/1:12,1:13:36.35:36,0,1214	0/0:10,0:10:19.80:0,20,710	0/0:14,0:14:30.10:0,30,1062	1/1:0,30:30:80.90:1611,81,0	0/0:24,0:24:69.21:0,69,2373	0/0:24,0:24:60.20:0,60,2230	1/1:2,24:26:69.06:1247,69,0	0/0:19,0:19:57.20:0,57,2220	1/1:0,30:30:87.27:2042,87,0	1/1:1,20:21:54.02:1092,54,0	0/0:11,0:11:33.11:0,33,1294	0/0:21,0:21:57.19:0,57,2080	0/0:19,0:19:54.19:0,54,2115	1/1:0,18:17:48.16:1207,48,0	1/1:1,14:15:33.11:827,33,0	1/1:3,8:11:21.03:466,21,0	1/1:1,4:5:12.04:302,12,0	1/1:1,9:10:27.01:509,27,0	1/1:3,24:27:69.20:1659,69,0	1/1:2,8:10:9.03:226,9,0	0/0:19,0:19:45.15:0,45,1722	0/0:25,0:25:72.25:0,72,2779	0/0:16,0:16:48.14:0,48,1741	1/1:1,16:17:36.04:769,36,0	1/1:0,22:22:63.17:1526,63,0	1/1:2,30:32:69.19:1656,69,0	1/1:3,2:5:6.02:151,6,0
chr10	81355465	.	G	GA	12484.01	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=5.193;DP=538;FS=4.113;HRun=7;HaplotypeScore=74.5458;InbreedingCoeff=0.9339;MQ=77.10;MQ0=0;MQRankSum=-1.214;QD=28.05;ReadPosRankSum=2.986;VQSLOD=5.7213;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:36:0,36,337	0/0:10,0:10:27.04:0,27,261	0/0:12,0:12:27.03:0,27,258	0/0:18,0:18:35.70:0,36,319	1/1:4,28:32:55.13:898,55,0	1/1:6,27:33:81.25:975,81,0	1/1:0,0:15:37.38:190,37,0	1/1:5,23:28:66.20:797,66,0	1/1:2,14:16:42.13:507,42,0	1/1:3,23:26:69.19:814,69,0	1/1:3,20:23:51.16:616,51,0	1/1:1,14:15:36.11:435,36,0	0/0:24,0:24:66.10:0,66,637	0/0:16,0:16:45.04:0,45,420	1/1:0,18:18:42.13:507,42,0	1/1:4,19:23:54.17:651,54,0	1/1:0,15:15:42.13:507,42,0	1/1:2,10:12:24.07:289,24,0	1/1:5,12:18:44.35:474,44,0	1/1:3,25:29:78.06:904,78,0	1/1:2,10:12:1.12:297,1,0	1/1:1,15:16:45.14:544,45,0	1/1:4,23:27:66.15:797,66,0	1/1:1,13:14:27.08:326,27,0	1/1:4,19:23:42.13:507,42,0	1/1:2,21:23:63.19:760,63,0	1/1:4,19:23:51.16:614,51,0	1/1:0,4:4:6.02:72,6,0
chr10	81356408	.	TA	T	9860.75	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=3.264;DP=612;FS=1.399;HRun=9;HaplotypeScore=68.9452;InbreedingCoeff=0.9923;MQ=82.71;MQ0=1;MQRankSum=-2.604;QD=20.72;ReadPosRankSum=1.140;VQSLOD=5.5717;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:49.03:0,49,569	0/0:10,0:10:30.09:0,30,345	0/0:36,0:31:19.17:0,19,355	0/0:25,0:20:20.48:0,20,298	1/1:6,22:28:81.02:732,81,0	1/1:1,23:24:66.03:604,66,0	1/1:2,0:17:28.52:84,29,0	1/1:5,29:34:84.01:762,84,0	1/1:2,15:17:30.01:275,30,0	1/1:6,11:17:48.02:437,48,0	1/1:3,24:27:69.03:630,69,0	1/1:0,15:15:33.02:302,33,0	0/0:28,0:28:72.21:0,72,831	0/0:14,0:14:33.09:0,33,371	1/1:3,22:25:51.02:467,51,0	1/1:1,19:20:39.02:357,39,0	1/1:2,23:25:48.02:439,48,0	1/1:1,20:21:48.03:439,48,0	1/1:4,15:19:45:407,45,0	1/1:6,28:34:72.02:658,72,0	1/1:1,5:6:15.01:137,15,0	1/1:4,15:19:33.01:302,33,0	1/1:10,14:24:59.93:531,60,0	1/1:1,13:14:33.02:302,33,0	1/1:0,17:17:35.99:330,36,0	1/1:3,33:36:99:904,99,0	1/1:4,26:30:37.36:597,37,0	1/1:0,7:7:18.01:165,18,0
chr10	81356509	.	TTA	T	465.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.591;DP=529;FS=2.748;HRun=0;HaplotypeScore=99.2064;InbreedingCoeff=0.9870;MQ=75.95;MQ0=0;MQRankSum=-1.686;QD=25.86;ReadPosRankSum=-2.611;VQSLOD=4.1162;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.16:0,57,1077	0/0:9,0:9:27.08:0,27,505	0/0:16,0:15:18.94:0,19,488	0/0:13,0:13:28.76:0,29,383	0/0:32,0:32:84.69:0,85,585	0/0:17,0:17:41.01:0,41,244	1/1:0,17:18:36.12:560,36,0	0/0:29,0:29:34.09:0,34,427	0/0:14,0:14:29.24:0,29,170	0/0:16,0:16:46.44:0,46,273	0/0:25,0:25:36.21:0,36,376	0/0:12,0:12:31.83:0,32,188	0/0:32,0:32:96.21:0,96,1783	0/0:14,0:14:42.14:0,42,809	0/0:24,0:24:49.53:0,50,336	0/0:17,0:17:46.92:0,47,291	0/0:15,0:15:40.95:0,41,247	0/0:13,0:13:38.02:0,38,220	0/0:11,0:11:29.31:0,29,177	0/0:27,0:27:76.41:0,76,488	0/0:17,0:17:41.25:0,41,276	0/0:14,0:14:31.79:0,32,219	0/0:22,0:22:61.64:0,62,384	0/0:19,0:19:52.79:0,53,323	0/0:24,0:24:58.95:0,59,399	0/0:24,0:24:48.52:0,49,392	0/0:28,0:28:67.48:0,67,452	0/0:8,0:8:23.48:0,23,161
chr10	81356510	.	TA	T	8490.19	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=6.540;DP=522;FS=2.659;HRun=10;HaplotypeScore=60.2600;InbreedingCoeff=0.9966;MQ=76.14;MQ0=0;MQRankSum=-2.865;QD=20.26;ReadPosRankSum=1.864;VQSLOD=5.9857;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.14:0,51,564	0/0:9,0:9:24.06:0,24,266	0/0:16,0:15:25.02:0,25,247	0/0:13,0:13:20.92:0,21,197	1/1:6,26:32:71.96:624,72,0	1/1:1,16:17:38.99:339,39,0	1/1:18,0:18:31.68:132,32,0	1/1:6,23:29:68.68:587,69,0	1/1:0,14:14:29.99:260,30,0	1/1:1,15:16:44.99:390,45,0	1/1:1,22:23:59.92:514,60,0	1/1:1,11:12:29.99:260,30,0	0/0:31,1:32:61.15:0,61,890	0/0:14,0:14:39.11:0,39,431	1/1:1,22:24:62.02:526,62,0	1/1:2,15:17:41.99:365,42,0	1/1:2,13:15:35.99:312,36,0	1/1:0,13:13:38.99:338,39,0	1/1:1,10:11:26.99:234,27,0	1/1:5,22:27:62.97:547,63,0	1/1:4,12:16:29.98:260,30,0	1/1:0,13:13:38.99:338,39,0	1/1:2,19:21:53.98:469,54,0	1/1:1,17:18:47.99:417,48,0	1/1:5,18:23:41.98:365,42,0	1/1:2,22:24:65.97:569,66,0	1/1:3,25:28:26.70:461,27,0	1/1:1,7:8:20.98:182,21,0
chr10	81357811	.	C	CA	5800.79	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-2.939;DP=757;FS=5.439;HRun=1;HaplotypeScore=103.8916;InbreedingCoeff=0.9967;MQ=86.01;MQ0=0;MQRankSum=-5.260;QD=41.43;ReadPosRankSum=2.712;VQSLOD=4.7688;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,184,2326	0/0:13,0:13:39.13:0,39,506	0/0:29,0:29:84.22:0,84,1036	0/0:24,0:24:57.18:0,57,723	0/0:30,0:30:84.26:0,84,1072	1/1:0,12:12:36.12:540,36,0	0/0:24,0:24:69.22:0,69,896	0/0:32,0:32:90.29:0,90,1169	1/1:0,22:22:63.21:944,63,0	0/0:33,0:33:99:0,99,1258	0/0:23,0:23:66.20:0,66,843	1/1:1,25:26:72.24:1079,72,0	0/0:31,0:31:93.29:0,93,1192	0/0:31,1:32:48.32:0,48,1123	0/0:24,0:24:72.23:0,72,935	0/0:40,0:40:99:0,117,1519	0/0:29,0:29:84.25:0,84,1073	0/0:17,0:17:51.17:0,51,662	0/0:33,0:33:93.29:0,93,1196	0/0:14,0:14:36.12:0,36,467	0/0:47,0:47:99:0,138,1741	1/1:0,31:31:90.20:1314,90,0	1/1:0,18:18:51.17:754,51,0	1/1:0,31:31:78.26:1169,78,0	0/0:29,0:29:84.24:0,84,1061	0/0:26,0:26:78.24:0,78,989	0/0:19,0:19:57.17:0,57,725	0/0:5,0:5:15.05:0,15,195
chr10	81358179	.	C	CTTG	31722.49	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-15.088;DP=745;FS=13.046;HRun=0;HaplotypeScore=90.9819;InbreedingCoeff=0.9995;MQ=87.52;MQ0=0;MQRankSum=-6.609;QD=54.98;ReadPosRankSum=3.777;VQSLOD=6.5597;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,105,1652	0/0:12,0:12:33.11:0,33,539	0/0:29,0:29:78.24:0,78,1198	0/0:33,0:33:84.25:0,84,1282	1/1:3,31:34:72.12:1453,72,0	1/1:1,26:28:66.23:1474,66,0	1/1:3,21:24:51.18:1139,51,0	1/1:10,30:41:99:2350,111,0	1/1:0,29:30:84.29:1876,84,0	1/1:6,32:38:99:2234,105,0	1/1:1,21:23:57.20:1273,57,0	1/1:0,30:32:78.74:1741,79,0	0/0:31,0:31:87.28:0,87,1363	0/0:24,0:24:72.25:0,72,1165	1/1:4,26:30:69.24:1541,69,0	1/1:1,27:28:78.27:1742,78,0	1/1:1,18:20:45.15:1004,45,0	1/1:1,13:14:36.12:804,36,0	1/1:2,13:16:45.14:861,45,0	1/1:3,20:23:59.58:1306,60,0	1/1:2,20:22:51.17:1139,51,0	1/1:5,23:28:60.12:1201,60,0	1/1:1,24:26:69.24:1480,69,0	1/1:1,16:18:45.15:975,45,0	1/1:1,24:25:69.24:1539,69,0	1/1:3,23:26:78.25:1643,78,0	1/1:5,36:42:99:2411,108,0	1/1:1,8:9:24.08:536,24,0
chr10	81358182	.	G	GT	5996.16	PASS	AB=0.985;AC=36;AF=0.643;AN=56;BaseQRankSum=17.603;DP=718;FS=4.125;HRun=2;HaplotypeScore=145.7220;InbreedingCoeff=0.4166;MQ=86.50;MQ0=0;MQRankSum=-6.445;QD=10.75;ReadPosRankSum=8.068;VQSLOD=2.8778;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1360	0/0:11,0:11:33.11:0,33,429	0/0:28,0:28:78.20:0,78,958	0/0:31,0:31:87.24:0,87,1090	0/1:34,1:35:81:265,0,81	1/1:26,0:26:62.53:317,63,0	0/1:22,0:22:8.28:191,0,8	0/1:37,0:37:99:368,0,121	1/1:32,0:32:23.49:342,23,0	0/1:36,2:38:14.21:423,0,14	1/1:23,0:23:25.42:251,25,0	1/1:33,0:33:39.28:337,39,0	0/0:30,0:30:90.28:0,90,1151	0/0:24,0:24:72.23:0,72,934	1/1:27,0:27:30.25:294,30,0	1/1:27,0:27:73.86:375,74,0	1/1:18,0:18:42.73:219,43,0	0/1:14,0:14:0.74:136,0,1	0/1:12,0:12:33.10:138,0,33	0/1:22,1:23:12.58:217,0,13	1/1:20,0:20:16.12:210,16,0	1/1:24,0:24:20.12:249,20,0	1/1:26,0:26:16.04:254,16,0	1/1:18,0:18:39.77:202,40,0	1/1:26,0:26:30.17:293,30,0	1/1:23,2:25:36.51:397,37,0	0/1:43,0:43:39.65:405,0,40	1/1:9,0:9:22.73:115,23,0
chr10	81358278	.	C	CT	399.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.115;DP=672;FS=0.000;HRun=1;HaplotypeScore=63.4328;InbreedingCoeff=0.9912;MQ=82.86;MQ0=0;MQRankSum=-2.488;QD=28.56;ReadPosRankSum=-1.761;VQSLOD=2.8901;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.16:0,48,623	0/0:10,0:10:30.10:0,30,389	0/0:19,0:19:52.89:0,53,588	0/0:19,0:19:36.49:0,36,500	0/0:40,0:40:99:0,111,1424	0/0:29,0:29:87.27:0,87,1115	1/1:1,13:14:33.11:494,33,0	0/0:26,0:26:78.20:0,78,981	0/0:27,0:27:78.23:0,78,983	0/0:33,0:33:99:0,99,1283	0/0:36,0:36:99:0,108,1374	0/0:26,0:26:75.23:0,75,960	0/0:22,0:22:63.20:0,63,817	0/0:20,0:20:60.20:0,60,779	0/0:33,0:33:96.31:0,96,1244	0/0:19,0:19:57.19:0,57,740	0/0:17,0:17:48.16:0,48,623	0/0:15,0:15:42.14:0,42,545	0/0:20,0:20:57.16:0,57,723	0/0:29,0:29:84.25:0,84,1062	0/0:24,0:24:72.22:0,72,919	0/0:25,0:25:75.24:0,75,973	0/0:22,0:22:66.21:0,66,857	0/0:20,0:20:51.17:0,51,661	0/0:27,0:27:81.26:0,81,1051	0/0:26,0:26:75.24:0,75,974	0/0:51,0:51:99:0,138,1760	0/0:6,0:6:18.06:0,18,233
chr10	81358664	.	AG	A	589.06	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.132;DP=627;FS=8.014;HRun=1;HaplotypeScore=115.4455;InbreedingCoeff=0.9997;MQ=84.95;MQ0=0;MQRankSum=-4.102;QD=32.73;ReadPosRankSum=-1.302;VQSLOD=2.2951;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.19:0,63,981	0/0:11,0:11:33.09:0,33,481	0/0:29,0:28:81.20:0,81,1193	0/0:32,0:32:76.49:0,76,1183	0/0:39,0:39:99:0,117,1809	0/0:18,0:18:53.67:0,54,821	1/1:4,14:18:51.13:684,51,0	0/0:20,0:20:60.19:0,60,919	0/0:25,0:25:72.19:0,72,1078	0/0:16,0:16:48.13:0,48,741	0/0:30,0:30:90.28:0,90,1387	0/0:19,0:19:54.18:0,54,853	0/0:23,0:23:69.23:0,69,1085	0/0:20,0:20:60.19:0,60,932	0/0:18,0:18:54.16:0,54,835	0/0:23,0:23:63.17:0,63,932	0/0:20,0:20:57.19:0,57,908	0/0:16,0:16:42.14:0,42,667	0/0:16,0:16:48.16:0,48,762	0/0:27,0:27:81.26:0,81,1264	0/0:18,0:18:51.11:0,51,785	0/0:16,0:16:48.15:0,48,732	0/0:33,0:33:93.30:0,93,1454	0/0:16,0:16:48.15:0,48,743	0/0:26,0:26:75.26:0,75,1198	0/0:25,0:25:75.26:0,75,1191	0/0:28,0:28:78.05:0,78,1242	0/0:22,0:22:63.20:0,63,982
chr10	81358682	.	G	GACAGTTAACAAT	2216.26	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.428;DP=647;FS=7.970;HRun=0;HaplotypeScore=276.5974;InbreedingCoeff=0.9992;MQ=88.58;MQ0=0;MQRankSum=-5.826;QD=105.54;ReadPosRankSum=-2.898;VQSLOD=2.1587;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.23:0,75,2551	0/0:10,0:11:30.10:0,30,1082	0/0:30,0:30:78.25:0,78,2488	0/0:27,0:27:65.24:0,65,2123	0/0:36,0:36:99:0,105,3729	0/0:17,0:17:49.41:0,49,1717	1/1:17,4:21:54.15:2311,54,0	0/0:23,0:23:63.21:0,63,1990	0/0:22,0:22:57.15:0,57,1672	0/0:19,0:19:48.16:0,48,1602	0/0:36,0:36:99:0,108,3750	0/0:19,0:19:51.18:0,51,1690	0/0:27,0:27:75.19:0,75,2394	0/0:22,0:22:66.20:0,66,2173	0/0:18,0:18:54.19:0,54,1916	0/0:21,0:21:57.18:0,57,1989	0/0:18,0:18:42.14:0,42,1508	0/0:16,0:16:40.69:0,41,1302	0/0:15,0:15:42.12:0,42,1216	0/0:27,0:27:75.24:0,75,2666	0/0:19,0:19:51.13:0,51,1674	0/0:16,0:16:36.12:0,36,1316	0/0:32,0:32:84.24:0,84,2727	0/0:16,0:16:42.14:0,42,1450	0/0:32,0:32:90.16:0,90,3146	0/0:27,0:27:72.24:0,72,2578	0/0:33,0:32:90.25:0,90,2925	0/0:21,0:21:54.19:0,54,1885
chr10	81358710	.	A	AC	18096.73	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-7.636;DP=598;FS=11.943;HRun=2;HaplotypeScore=66.1109;InbreedingCoeff=0.9989;MQ=83.91;MQ0=0;MQRankSum=-2.205;QD=37.62;ReadPosRankSum=1.438;VQSLOD=4.6879;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.29:0,93,1151	0/0:12,0:12:33.04:0,33,377	0/0:19,0:19:51.06:0,51,584	0/0:16,0:16:30.05:0,30,341	1/1:3,42:45:99:1714,120,0	1/1:1,16:17:45.15:647,45,0	1/1:2,10:12:24.08:344,24,0	1/1:2,23:25:69.21:970,69,0	1/1:1,15:16:39.13:561,39,0	1/1:1,13:14:36.11:500,36,0	1/1:0,32:32:87.21:1223,87,0	1/1:0,19:19:51.17:734,51,0	0/0:24,0:24:72.23:0,72,892	0/0:15,0:15:45.14:0,45,558	1/1:2,15:17:42.14:605,42,0	1/1:0,25:25:66.22:950,66,0	1/1:1,17:18:42.14:604,42,0	1/1:0,11:11:27.09:388,27,0	1/1:2,19:21:60.20:852,60,0	1/1:1,30:31:84.28:1208,84,0	1/1:0,13:13:36.12:518,36,0	1/1:0,14:14:36.01:491,36,0	1/1:1,33:34:84.28:1209,84,0	1/1:4,10:14:27.09:389,27,0	1/1:1,28:29:81.27:1166,81,0	1/1:0,28:27:81.27:1166,81,0	1/1:0,30:29:84.28:1208,84,0	1/1:0,16:16:45.15:648,45,0
chr10	81359934	.	CGTGTGT	C	1994.09	PASS	AB=0.955;AC=31;AF=0.674;AN=46;BaseQRankSum=4.007;DP=275;FS=10.388;HRun=0;HaplotypeScore=74.1233;InbreedingCoeff=0.2982;MQ=54.08;MQ0=8;MQRankSum=-3.098;QD=13.12;ReadPosRankSum=-0.427;VQSLOD=0.8057;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:18:2.81:0,3,24	0/0:9,0:9:12.02:0,12,315	0/0:29,0:16:2.92:0,3,17	0/0:32,0:15:2.96:0,3,19	./.	1/1:10,0:10:20.94:363,21,0	./.	0/0:10,0:8:2.50:0,2,9	1/1:9,0:9:12.04:236,12,0	./.	./.	1/1:10,0:10:15.05:304,15,0	0/1:16,3:19:9.21:171,0,9	1/1:11,6:17:7.01:237,7,0	1/1:8,0:8:6.02:84,6,0	1/1:10,0:10:9.03:126,9,0	0/0:5,0:4:2.80:0,3,13	1/1:3,0:3:3.01:42,3,0	1/1:11,0:11:2.90:42,3,0	1/1:5,0:5:6.02:84,6,0	1/1:8,0:7:3.01:42,3,0	1/1:4,0:4:3.01:61,3,0	1/1:5,0:5:3.01:61,3,0	1/1:6,0:6:3.01:61,3,0	1/1:3,0:3:3.01:42,3,0	0/1:14,0:12:8.55:79,0,9	0/1:10,0:10:1.55:96,0,2	./.
chr10	81359970	.	TGTGTG	T	1179.23	PASS	AB=0.935;AC=20;AF=0.370;AN=54;BaseQRankSum=7.686;DP=281;FS=39.804;HRun=0;HaplotypeScore=91.8367;InbreedingCoeff=-0.2515;MQ=46.51;MQ0=15;MQRankSum=-7.245;QD=7.19;ReadPosRankSum=6.344;VQSLOD=-0.0923;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:40.76:0,41,501	0/0:10,0:10:27.09:0,27,542	0/0:18,0:7:21.06:0,21,255	0/0:26,0:14:42.12:0,42,523	0/1:6,0:6:10.78:11,0,24	0/1:5,5:10:14.42:214,0,14	0/0:9,0:8:11.99:0,12,101	0/0:11,0:9:17.74:0,18,75	0/1:7,5:11:20:164,0,20	0/0:6,0:6:11.01:0,11,51	0/0:4,0:4:4.65:0,5,21	1/1:2,4:6:5.26:180,5,0	0/1:15,0:15:37.05:37,0,243	0/1:10,0:10:66.29:66,0,134	0/1:5,0:5:4.86:70,0,5	0/1:9,0:9:21.88:125,0,22	0/0:9,0:8:22.63:0,23,113	0/1:5,0:5:25.80:26,0,55	0/1:9,0:8:18.30:18,0,84	0/1:5,0:5:0.44:88,0,0	0/1:16,0:14:27.92:28,0,91	0/1:5,1:6:21.59:29,0,22	0/1:9,1:10:50.72:53,0,51	0/1:11,3:14:40.28:44,0,40	1/1:4,0:3:5.98:58,6,0	0/1:12,0:11:47.57:48,0,96	0/1:10,0:8:38:80,0,38	./.
chr10	81360148	.	GA	G	8066.02	PASS	AB=0.577;AC=43;AF=0.768;AN=56;BaseQRankSum=5.595;DP=439;FS=5.489;HRun=7;HaplotypeScore=67.6418;InbreedingCoeff=0.8541;MQ=86.08;MQ0=0;MQRankSum=-5.335;QD=24.90;ReadPosRankSum=1.597;VQSLOD=5.5830;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.25:0,78,981	0/0:10,0:10:21.07:0,21,264	0/0:20,0:20:38.32:0,38,430	0/0:19,0:18:35.95:0,36,399	1/1:0,7:7:18.04:183,18,0	1/1:1,26:27:75.17:765,75,0	1/1:5,15:20:33.07:337,33,0	1/1:2,29:31:87.20:887,87,0	1/1:5,22:27:51.11:520,51,0	1/1:1,16:17:48.11:490,48,0	1/1:0,4:4:9.02:92,9,0	1/1:1,11:12:30.07:306,30,0	0/0:20,0:20:54.17:0,54,679	0/0:19,0:19:51.16:0,51,641	1/1:1,15:16:45.10:459,45,0	1/1:1,22:23:60.13:612,60,0	1/1:1,13:14:33.07:337,33,0	1/1:1,10:11:30.07:306,30,0	1/1:2,22:24:59.64:611,60,0	1/1:0,4:4:9.02:91,9,0	1/1:1,7:8:18.04:184,18,0	1/1:0,3:3:9.02:92,9,0	1/1:0,4:4:9.02:92,9,0	1/1:3,15:18:42.10:428,42,0	1/1:0,10:10:24.05:245,24,0	0/1:4,11:15:36.40:297,0,36	1/1:3,17:20:45.08:459,45,0	1/1:0,9:9:27.06:275,27,0
chr10	81361413	.	GAT	G	174.44	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.436;DP=606;FS=0.000;HRun=0;HaplotypeScore=97.4181;InbreedingCoeff=0.9902;MQ=77.32;MQ0=0;MQRankSum=-0.031;QD=24.92;ReadPosRankSum=-0.238;VQSLOD=4.3202;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.25:0,81,1482	0/0:10,0:10:30.09:0,30,531	0/0:12,0:12:30.10:0,30,553	0/0:15,0:15:41.13:0,41,632	0/0:34,0:34:99:0,99,1739	0/0:25,0:24:75.21:0,75,1309	1/1:0,7:7:18.06:265,18,0	0/0:38,0:38:99:0,108,1968	0/0:31,0:31:90.31:0,90,1661	0/0:26,0:26:75.26:0,75,1403	0/0:16,0:16:42.14:0,42,769	0/0:16,0:16:48.16:0,48,899	0/0:23,0:23:69.24:0,69,1291	0/0:19,0:19:57.20:0,57,1058	0/0:17,0:17:51.17:0,51,927	0/0:16,0:16:48.16:0,48,884	0/0:17,0:17:51.15:0,51,887	0/0:13,0:13:33.11:0,33,618	0/0:28,0:28:66.21:0,66,1187	0/0:35,0:35:99:0,99,1788	0/0:30,0:30:84.25:0,84,1502	0/0:14,0:14:36.11:0,36,643	0/0:19,0:19:48.16:0,48,876	0/0:16,0:16:45.14:0,45,810	0/0:35,0:35:99:0,102,1856	0/0:22,0:22:66.23:0,66,1232	0/0:33,0:33:99:0,99,1796	0/0:11,0:11:33.11:0,33,617
chr10	81361792	.	G	GCT	505.12	PASS	AB=0.939;AC=15;AF=0.326;AN=46;BaseQRankSum=-1.599;DP=526;FS=19.203;HRun=0;HaplotypeScore=90.0345;InbreedingCoeff=0.3556;MQ=72.11;MQ0=18;MQRankSum=-0.749;QD=3.22;ReadPosRankSum=-2.082;VQSLOD=0.5139;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:2.84:0,3,14	1/1:9,0:9:6:52,6,0	./.	./.	./.	0/0:16,0:17:2.84:0,3,14	0/0:16,0:15:3.48:0,3,32	./.	0/0:9,0:11:8.52:0,9,42	0/0:24,0:24:11.40:0,11,119	0/0:23,0:23:5.98:0,6,52	1/1:22,0:20:6.96:73,7,0	0/0:12,0:13:7.69:0,8,45	0/0:11,0:14:2.84:0,3,14	0/1:14,4:18:25.79:38,0,26	0/0:5,0:6:5.68:0,6,28	0/1:17,0:17:49.87:50,0,71	1/1:8,1:10:6.48:71,6,0	0/0:18,0:17:2.80:0,3,19	0/0:23,0:23:8.75:0,9,79	0/0:11,0:11:9.01:0,9,88	./.	0/0:8,0:8:3:0,3,32	1/1:22,0:22:8.76:69,9,0	1/1:15,2:17:3.01:44,3,0	1/1:15,5:20:16.67:138,17,0	0/0:19,0:19:5.94:0,6,55	0/1:21,0:19:6.07:118,0,6
chr10	81362072	.	G	GA	7756.66	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=3.627;DP=497;FS=0.000;HRun=1;HaplotypeScore=109.7537;InbreedingCoeff=0.9755;MQ=80.51;MQ0=1;MQRankSum=-3.447;QD=28.52;ReadPosRankSum=0.619;VQSLOD=4.5341;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.15:0,51,691	0/0:9,0:9:27.09:0,27,378	0/0:26,0:22:24.70:0,25,452	0/0:20,0:19:8.98:0,9,392	1/1:1,20:21:42.94:467,43,0	0/0:18,0:18:48.93:0,49,265	0/0:13,0:13:34.99:0,35,241	1/1:3,14:17:48.09:561,48,0	0/0:28,0:28:53.57:0,54,392	1/1:7,6:13:24.50:316,25,0	1/1:2,18:20:42.27:498,42,0	0/0:14,0:14:38.50:0,38,207	0/0:28,0:28:81.26:0,81,1111	0/0:17,0:17:45.15:0,45,623	1/1:0,16:16:39.11:451,39,0	1/1:2,14:16:48.06:533,48,0	1/1:2,20:23:61.87:708,62,0	1/1:2,9:11:20.53:243,21,0	1/1:3,15:18:45.08:538,45,0	1/1:1,22:23:57.13:645,57,0	1/1:1,10:11:30.05:350,30,0	0/0:2,0:2:5.81:0,6,32	0/0:12,0:12:34.91:0,35,199	0/0:18,0:18:49.24:0,49,268	1/1:1,21:22:60.12:698,60,0	1/1:2,15:17:45.08:530,45,0	1/1:3,21:24:64.95:772,65,0	1/1:1,19:20:31.08:448,31,0
chr10	81362073	.	G	GA	8505.37	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=2.523;DP=508;FS=2.078;HRun=7;HaplotypeScore=108.7022;InbreedingCoeff=0.9575;MQ=79.15;MQ0=1;MQRankSum=-2.339;QD=29.33;ReadPosRankSum=-0.534;VQSLOD=3.9057;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.05:0,51,481	0/0:10,0:10:27.04:0,27,261	0/0:28,0:22:34.45:0,34,308	0/0:20,0:19:2.71:0,3,208	1/1:20,0:20:45.05:508,45,0	0/0:19,0:19:21.27:0,21,182	1/1:2,11:13:30.09:362,30,0	1/1:17,0:17:45.14:535,45,0	0/0:27,0:27:49.29:0,49,312	1/1:14,0:14:30.05:335,30,0	1/1:21,0:21:51.06:566,51,0	0/0:15,0:15:36.14:0,36,166	0/0:28,0:28:66.04:0,66,622	0/0:18,0:18:42.04:0,42,399	1/1:15,0:15:39.12:469,39,0	1/1:17,0:17:48.09:548,48,0	1/1:23,0:23:61.74:725,62,0	1/1:13,0:13:27.03:307,27,0	1/1:18,0:18:45.14:540,45,0	1/1:23,0:23:57.15:663,57,0	1/1:12,0:12:33.03:379,33,0	0/0:2,0:2:5.60:0,6,26	0/0:12,0:12:33.73:0,34,163	0/0:19,0:19:45.93:0,46,209	1/1:23,0:23:60.18:721,60,0	1/1:17,0:17:48.14:565,48,0	1/1:23,1:24:66.19:782,66,0	1/1:19,1:20:42.13:500,42,0
chr10	81362821	.	AT	A	8329.86	PASS	AB=0.537;AC=29;AF=0.518;AN=56;BaseQRankSum=9.569;DP=578;FS=0.321;HRun=8;HaplotypeScore=87.6065;InbreedingCoeff=0.9295;MQ=71.19;MQ0=0;MQRankSum=-3.602;QD=24.07;ReadPosRankSum=3.342;VQSLOD=5.3293;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:42.06:0,42,476	0/0:8,0:8:24.07:0,24,289	0/0:10,0:10:25.05:0,25,255	0/0:10,0:10:24:0,24,263	1/1:2,30:32:87.13:840,87,0	0/0:31,0:31:87.25:0,87,1030	0/0:15,0:15:45.08:0,45,516	1/1:3,17:20:48.04:456,48,0	0/0:24,0:24:69.21:0,69,833	1/1:4,29:33:87.08:831,87,0	1/1:4,22:26:60.08:579,60,0	0/0:11,0:11:33.10:0,33,398	0/0:24,0:24:72.22:0,72,869	0/0:14,0:14:42.13:0,42,507	1/1:1,23:24:60.10:579,60,0	0/1:3,19:22:15.39:435,0,15	1/1:2,15:17:38.98:376,39,0	1/1:2,10:12:30.04:290,30,0	1/1:2,21:23:62.75:585,63,0	1/1:1,34:35:93.14:898,93,0	1/1:1,18:19:45.07:435,45,0	0/0:19,0:19:54.17:0,54,652	0/0:29,0:30:84.10:0,84,978	0/0:17,0:17:48.15:0,48,580	1/1:0,10:10:30.05:290,30,0	1/1:3,20:23:60.06:572,60,0	1/1:3,28:32:74.15:701,74,0	1/1:2,16:18:48.08:463,48,0
chr10	81363640	.	T	TA	8813.03	PASS	AB=0.552;AC=29;AF=0.518;AN=56;BaseQRankSum=-15.674;DP=596;FS=1.857;HRun=9;HaplotypeScore=65.3595;InbreedingCoeff=0.9172;MQ=77.50;MQ0=0;MQRankSum=-2.225;QD=25.92;ReadPosRankSum=1.319;VQSLOD=5.4985;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:29.99:0,30,260	0/0:7,0:7:14.03:0,14,110	0/0:24,0:24:45.84:0,46,353	0/0:16,0:15:11.37:0,11,176	1/1:1,21:22:60.06:635,60,0	0/0:25,0:25:59.96:0,60,521	0/0:14,0:14:38.97:0,39,334	1/1:5,19:24:54.08:564,54,0	0/0:16,0:16:47.99:0,48,417	1/1:1,20:21:37.08:620,37,0	1/1:2,24:26:46.15:737,46,0	0/0:18,0:19:47.02:0,47,396	0/0:24,0:24:68.97:0,69,596	0/0:23,0:23:38.97:0,39,495	1/1:2,27:29:52.16:804,52,0	1/1:4,10:14:27.07:299,27,0	0/1:3,13:16:12.90:325,0,13	1/1:0,8:8:24.06:265,24,0	1/1:4,9:13:10.01:318,10,0	1/1:4,35:39:93.22:1016,93,0	1/1:3,14:17:42.11:465,42,0	0/0:36,0:36:86.94:0,87,751	0/0:27,0:27:74.98:0,75,651	0/0:12,0:12:26.99:0,27,234	1/1:6,24:30:31.62:572,32,0	1/1:3,20:23:60.11:635,60,0	1/1:3,24:27:57.15:631,57,0	1/1:2,29:30:84.23:929,84,0
chr10	81364954	.	TA	T	1880.83	PASS	AB=0.833;AC=25;AF=0.446;AN=56;BaseQRankSum=7.682;DP=438;FS=1.476;HRun=2;HaplotypeScore=108.4673;InbreedingCoeff=0.5454;MQ=63.59;MQ0=6;MQRankSum=0.759;QD=6.60;ReadPosRankSum=4.055;VQSLOD=1.0402;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:62.95:0,63,932	0/0:7,0:7:18.06:0,18,267	0/0:12,0:8:24.04:0,24,302	0/0:9,0:5:9.03:0,9,135	0/1:30,11:41:19.88:247,0,20	0/0:21,0:21:29.78:0,30,214	0/0:9,0:9:27.09:0,27,388	1/1:29,0:27:4.79:130,5,0	0/0:19,0:19:6.39:0,6,93	1/1:15,3:18:4.34:154,4,0	1/1:17,8:25:18.61:201,19,0	0/0:16,0:15:14.02:0,14,131	0/0:8,0:8:24.08:0,24,353	0/0:5,0:5:15.05:0,15,225	1/1:6,2:8:13.69:90,14,0	1/1:9,4:13:18.60:130,19,0	1/1:13,6:19:26.31:168,26,0	0/1:8,1:9:4.50:36,0,5	0/1:12,2:13:42.27:56,0,42	0/1:19,4:23:94.14:94,0,104	0/1:4,2:6:20.65:36,0,21	0/0:7,0:7:8.89:0,9,78	0/0:11,0:11:10.28:0,10,85	0/0:7,0:7:3.34:0,3,44	1/1:15,7:22:44.92:270,45,0	1/1:19,3:22:9.91:167,10,0	1/1:14,7:21:27.55:148,28,0	1/1:9,6:15:26.46:155,26,0
chr10	81364957	.	TAA	T	4453.24	PASS	AB=0.941;AC=33;AF=0.589;AN=56;BaseQRankSum=3.932;DP=430;FS=4.728;HRun=2;HaplotypeScore=107.1541;InbreedingCoeff=0.3255;MQ=61.28;MQ0=6;MQRankSum=-0.747;QD=12.44;ReadPosRankSum=4.621;VQSLOD=2.2728;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:68.94:0,69,1291	0/0:6,0:6:18.06:0,18,302	0/0:10,0:6:18.02:0,18,280	0/0:9,0:5:8.63:0,9,175	1/1:29,11:40:3.85:498,4,0	0/1:20,0:20:23.70:24,0,357	0/0:10,0:10:30.10:0,30,525	1/1:26,0:24:8.93:222,9,0	0/1:20,0:20:37.24:37,0,157	1/1:15,3:18:31.83:333,32,0	1/1:16,8:24:54.14:435,54,0	0/1:15,0:14:38.13:38,0,176	0/0:8,0:8:24.08:0,24,458	0/0:5,0:5:15.05:0,15,294	1/1:5,1:7:20.12:148,20,0	1/1:9,4:13:35.95:259,36,0	1/1:14,6:20:51.61:350,52,0	1/1:8,1:9:20.24:117,20,0	0/1:12,2:13:9.75:148,0,10	0/1:18,4:22:63.76:221,0,64	0/1:4,2:6:3.85:79,0,4	0/1:7,0:7:15.04:15,0,77	0/1:12,0:12:20.85:21,0,164	0/1:7,0:7:12.29:12,0,90	1/1:16,7:23:63.35:496,63,0	1/1:18,3:21:19.27:351,19,0	1/1:13,7:20:55.85:358,56,0	1/1:8,6:14:39.85:292,40,0
chr10	81365244	.	GA	G	11129.60	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=14.143;DP=544;FS=0.910;HRun=8;HaplotypeScore=95.4336;InbreedingCoeff=0.9976;MQ=79.21;MQ0=0;MQRankSum=-5.546;QD=25.35;ReadPosRankSum=1.288;VQSLOD=5.1233;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:33.09:0,33,387	0/0:8,0:8:24.07:0,24,290	0/0:14,0:14:24.56:0,25,333	0/0:13,0:13:30.09:0,30,362	1/1:3,32:35:87.12:839,87,0	1/1:3,26:29:63.10:608,63,0	0/0:19,0:19:51.13:0,51,593	1/1:6,21:27:57.08:550,57,0	1/1:0,14:14:39.06:377,39,0	1/1:1,20:21:60.08:575,60,0	1/1:1,13:14:39.06:377,39,0	1/1:0,19:19:57.09:551,57,0	0/0:19,0:19:54.17:0,54,652	0/0:19,0:19:48.13:0,48,568	1/1:1,28:29:72.11:695,72,0	1/1:0,19:19:54.09:522,54,0	1/1:2,17:19:48.08:464,48,0	1/1:1,7:8:18.03:174,18,0	1/1:3,21:24:63.05:590,63,0	1/1:1,32:33:93.14:898,93,0	1/1:0,11:11:33.05:319,33,0	1/1:0,13:13:39.06:377,39,0	1/1:0,21:21:63.10:608,63,0	1/1:1,14:15:39.06:377,39,0	1/1:3,22:25:66.11:637,66,0	1/1:4,16:20:48.07:463,48,0	1/1:3,21:24:63.10:608,63,0	1/1:1,18:19:54.09:522,54,0
chr10	81368354	.	A	ATT	17768.47	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-1.257;DP=534;FS=0.990;HRun=7;HaplotypeScore=70.0854;InbreedingCoeff=0.9768;MQ=69.78;MQ0=0;MQRankSum=-1.325;QD=39.40;ReadPosRankSum=1.060;VQSLOD=4.5016;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:33.08:0,33,372	0/0:9,0:9:24.07:0,24,280	0/0:9,0:9:17.40:0,17,183	0/0:3,0:3:6.02:0,6,70	1/1:6,27:34:83.73:1287,84,0	1/1:3,14:17:39.13:640,39,0	0/0:12,0:12:33.08:0,33,374	1/1:7,29:36:81.24:1282,81,0	1/1:2,22:24:57.19:935,57,0	1/1:1,24:26:74.71:1126,75,0	1/1:2,18:20:48.08:716,48,0	1/1:1,11:12:33.11:532,33,0	0/0:22,0:22:57.10:0,57,664	0/0:15,0:15:42.12:0,42,489	1/1:1,17:17:48.16:788,48,0	1/1:1,20:21:48.16:768,48,0	1/1:3,19:22:51.17:837,51,0	1/1:2,12:14:39.08:609,39,0	1/1:2,17:19:54.18:862,54,0	1/1:4,28:33:84.22:1305,84,0	1/1:1,7:8:18.06:295,18,0	1/1:2,16:18:48.12:733,48,0	1/1:1,19:20:57.19:933,57,0	1/1:3,12:14:33.11:542,33,0	1/1:1,27:28:75.26:1231,75,0	1/1:4,21:25:63.22:1032,63,0	1/1:1,21:23:54.17:870,54,0	1/1:4,11:17:27.09:443,27,0
chr10	81369707	.	T	TACACACACACACACAC	7438.86	PASS	AB=1.000;AC=46;AF=0.885;AN=52;BaseQRankSum=-4.193;DP=652;FS=1.611;HRun=0;HaplotypeScore=280.1887;InbreedingCoeff=0.0953;MQ=56.45;MQ0=7;MQRankSum=-0.493;QD=12.72;ReadPosRankSum=-0.709;VQSLOD=3.3099;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:14.58:237,0,15	0/0:5,0:8:3.79:0,4,67	./.	./.	1/1:20,0:20:3.01:214,3,0	1/1:22,0:31:8.68:92,9,0	1/1:22,0:22:2.69:24,3,0	1/1:40,0:40:57.35:718,57,0	1/1:23,0:23:22.65:401,23,0	1/1:29,0:27:44.76:899,45,0	1/1:22,0:20:11.96:118,12,0	1/1:22,0:21:20.91:407,21,0	1/1:17,0:18:6.02:84,6,0	1/1:19,0:19:15.03:329,15,0	1/1:27,0:26:15.05:401,15,0	1/1:14,0:14:6.02:369,6,0	1/1:16,0:16:6.02:263,6,0	0/1:10,0:10:14.98:15,0,99	1/1:22,0:22:15.57:399,16,0	1/1:23,0:23:3.01:214,3,0	0/1:25,0:24:16.42:91,0,16	1/1:26,0:26:5.88:74,6,0	1/1:25,0:24:6.02:99,6,0	0/1:22,0:22:0.36:0,0,0	1/1:28,0:28:15.02:223,15,0	1/1:31,0:31:51.97:1054,52,0	1/1:10,3:28:4.57:214,5,0	1/1:10,0:10:2.66:499,3,0
chr10	81369717	.	C	CACACACACACACACAT	6310.23	PASS	AB=0.896;AC=36;AF=0.643;AN=56;BaseQRankSum=-0.984;DP=693;FS=0.504;HRun=0;HaplotypeScore=269.9952;InbreedingCoeff=0.0286;MQ=45.96;MQ0=7;MQRankSum=-4.514;QD=10.48;ReadPosRankSum=4.968;VQSLOD=3.2474;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:92.22:92,0,140	0/0:9,0:9:12.35:0,12,162	0/0:30,0:15:11.99:0,12,105	0/0:29,0:10:17.95:0,18,168	1/1:4,20:32:3.01:229,3,0	0/1:34,0:34:15.41:15,0,88	1/1:3,0:20:6.12:28,6,0	1/1:40,0:40:64.06:1091,64,0	0/1:23,0:23:19.14:19,0,124	1/1:30,0:28:54.44:653,54,0	1/1:22,0:20:7.43:230,7,0	0/1:21,0:20:13.51:14,0,32	0/1:24,0:24:20.34:20,0,221	0/1:18,0:18:28.31:28,0,37	1/1:23,0:22:3.97:268,4,0	0/1:7,11:23:8.91:388,0,9	0/1:7,10:22:9.06:424,0,9	0/1:11,0:11:99:156,0,130	1/1:21,0:21:20.13:325,20,0	0/1:8,20:35:3.84:224,0,4	1/1:29,0:28:18.44:221,18,0	0/1:26,0:26:21.67:29,0,22	0/1:20,0:19:30.55:31,0,89	0/0:23,0:23:14.91:0,15,113	1/1:27,0:27:26.97:434,27,0	1/1:29,0:29:68.10:864,68,0	1/1:26,1:27:12.66:333,13,0	1/1:12,0:12:14.62:193,15,0
chr10	81369727	.	C	CAT	270.55	PASS	AB=0.970;AC=9;AF=0.161;AN=56;BaseQRankSum=1.328;DP=693;FS=5.820;HRun=0;HaplotypeScore=172.3382;InbreedingCoeff=-0.1967;MQ=45.06;MQ0=6;MQRankSum=-2.760;QD=1.11;ReadPosRankSum=3.281;VQSLOD=2.3327;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:19.30:0,19,224	0/0:8,0:8:14.66:0,15,121	0/0:28,0:14:29.83:0,30,289	0/0:29,0:10:16.67:0,17,172	0/1:31,0:31:17.55:18,0,56	0/1:30,0:30:46.09:46,0,117	0/0:19,0:19:3.72:0,4,81	0/1:42,0:42:8.24:8,0,543	0/1:24,0:24:76.09:76,0,154	0/0:34,0:32:33.75:0,34,456	0/0:22,0:20:14.09:0,14,93	0/0:22,0:21:2.01:0,2,147	0/0:23,0:23:30.62:0,31,279	0/0:19,0:19:17.82:0,18,129	0/0:23,0:22:30.13:0,30,214	0/1:23,0:23:0.29:0,0,104	0/1:25,0:25:3.81:4,0,96	0/0:7,0:7:4.36:0,4,67	0/0:21,0:21:27.64:0,28,322	0/0:35,0:35:12.79:0,13,160	0/0:30,0:29:33.07:0,33,253	0/1:15,9:24:42.35:42,0,90	0/1:20,0:19:23.14:122,0,23	0/1:25,0:25:81.26:81,0,139	0/0:26,0:26:20.57:0,21,186	0/0:29,0:29:34.38:0,34,338	0/0:26,0:26:14.40:0,14,140	0/0:16,0:16:29.46:0,29,210
chr10	81370104	.	TACACAC	T	4163.40	PASS	AB=0.911;AC=31;AF=0.574;AN=54;BaseQRankSum=5.774;DP=468;FS=2.921;HRun=0;HaplotypeScore=103.0327;InbreedingCoeff=0.6303;MQ=67.48;MQ0=7;MQRankSum=-7.950;QD=14.76;ReadPosRankSum=-1.258;VQSLOD=2.7384;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:29:10.07:10,0,309	0/0:7,0:7:9.03:0,9,244	./.	0/0:25,0:21:2.04:0,2,6	1/1:9,4:13:12:182,12,0	0/0:14,0:16:27.09:0,27,787	1/1:5,0:11:8.95:126,9,0	1/1:24,0:24:4.74:98,5,0	0/0:12,0:13:18.06:0,18,453	1/1:13,0:13:9.02:148,9,0	1/1:10,7:18:24.08:445,24,0	0/0:11,0:11:15.05:0,15,424	0/0:20,0:20:27.09:0,27,708	0/0:17,0:17:24.08:0,24,721	1/1:11,9:20:15.05:286,15,0	1/1:5,12:18:36.12:714,36,0	0/1:7,4:11:87.84:113,0,88	1/1:9,0:9:0.45:53,0,0	1/1:13,6:18:13.31:227,13,0	1/1:9,9:20:25.44:472,25,0	0/1:15,0:15:19.14:19,0,90	0/0:13,0:13:12.04:0,12,388	0/0:13,0:17:30:0,30,781	0/0:20,0:19:33.11:0,33,968	1/1:8,9:17:18.06:360,18,0	1/1:9,6:14:17.18:341,17,0	1/1:13,8:21:27.05:509,27,0	1/1:5,2:7:3.01:61,3,0
chr10	81370880	.	TG	T	12460.47	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=12.940;DP=599;FS=4.034;HRun=2;HaplotypeScore=61.3183;InbreedingCoeff=0.9966;MQ=89.46;MQ0=0;MQRankSum=-3.040;QD=36.01;ReadPosRankSum=0.985;VQSLOD=5.4562;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:36.12:0,36,538	0/0:5,0:5:15.05:0,15,222	0/0:28,0:28:81.19:0,81,1156	0/0:18,0:18:38.24:0,38,556	1/1:0,30:30:87.15:1087,87,0	0/0:17,0:17:51.14:0,51,723	0/0:13,0:13:39.13:0,39,584	1/1:1,28:29:84.25:1063,84,0	0/0:28,0:28:84.26:0,84,1218	1/1:0,33:33:99:1257,99,0	1/1:0,19:19:57.19:740,57,0	0/0:11,0:11:33.10:0,33,474	0/0:21,0:21:57.19:0,57,851	0/0:31,0:31:93.29:0,93,1353	1/1:0,23:23:66.21:857,66,0	1/1:0,27:27:72.23:935,72,0	1/1:1,6:7:18.06:228,18,0	1/1:0,10:10:30.10:388,30,0	1/1:1,17:18:51.15:641,51,0	1/1:0,35:35:99:1263,102,0	1/1:0,16:16:39.13:506,39,0	0/0:23,0:23:63.15:0,63,896	0/0:28,0:28:84.28:0,84,1257	0/0:18,0:18:54.17:0,54,789	1/1:0,21:21:57.19:740,57,0	1/1:0,26:26:78.04:986,78,0	1/1:1,37:38:99:1264,99,0	1/1:0,14:14:39.13:506,39,0
chr10	81371688	.	C	CAA	98.78	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.757;DP=598;FS=1.239;HRun=9;HaplotypeScore=67.9220;InbreedingCoeff=0.9531;MQ=61.74;MQ0=7;MQRankSum=1.004;QD=7.06;ReadPosRankSum=1.437;VQSLOD=-0.6655;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:79.94:0,80,825	0/0:7,0:7:21.05:0,21,223	0/0:30,0:16:30.77:0,31,290	0/0:35,0:18:39.03:0,39,390	0/0:34,0:35:92.94:0,93,960	0/0:23,0:23:63.15:0,63,670	1/1:2,12:14:12.04:185,12,0	0/0:28,0:28:51.01:0,51,517	0/0:18,0:18:51.09:0,51,534	0/0:19,0:19:54.10:0,54,558	0/0:21,0:22:56.87:0,57,587	0/0:13,0:13:39.10:0,39,415	0/0:20,0:20:45.07:0,45,469	0/0:19,0:19:32.98:0,33,341	0/0:19,0:21:35.99:0,36,494	0/0:9,0:9:24.02:0,24,244	0/0:21,0:20:51.04:0,51,520	0/0:30,0:29:81.12:0,81,839	0/0:16,0:15:42.04:0,42,420	0/0:27,0:29:53.99:0,54,676	0/0:20,0:20:51.10:0,51,542	0/0:25,0:25:66.16:0,66,701	0/0:19,0:19:48.06:0,48,493	0/0:12,0:12:30.03:0,30,300	0/0:22,0:22:60.12:0,60,622	0/0:15,0:15:42.09:0,42,441	0/0:33,0:32:93.15:0,93,969	0/0:8,0:9:18:0,18,247
chr10	81371895	.	GA	G	4319.42	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=10.734;DP=594;FS=2.515;HRun=9;HaplotypeScore=115.1357;InbreedingCoeff=0.9594;MQ=56.84;MQ0=4;MQRankSum=1.352;QD=8.73;ReadPosRankSum=2.389;VQSLOD=3.3410;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.21:0,72,831	0/0:8,0:8:21.06:0,21,242	0/0:14,0:6:12.03:0,12,132	0/0:8,0:6:18.02:0,18,187	1/1:41,0:41:40.92:128,41,0	1/1:2,26:28:69.04:631,69,0	1/1:3,10:13:21.01:192,21,0	1/1:26,0:23:24.90:71,25,0	1/1:1,22:23:63.03:577,63,0	1/1:20,0:20:27.31:77,27,0	1/1:23,0:23:22.38:69,22,0	1/1:3,12:15:33.02:302,33,0	0/0:22,0:22:63.17:0,63,717	0/0:19,0:19:57.17:0,57,658	1/1:22,0:22:16.57:68,17,0	1/1:16,0:16:18.66:53,19,0	1/1:21,0:21:28.24:80,28,0	1/1:17,1:18:24.77:89,25,0	1/1:18,0:17:18.45:54,18,0	1/1:27,0:27:36:102,36,0	1/1:10,0:10:10.87:31,11,0	1/1:4,27:31:75.03:687,75,0	1/1:2,16:18:48.02:439,48,0	1/1:4,14:18:7.87:324,8,0	1/1:20,0:20:21.76:62,22,0	1/1:33,0:33:36.46:106,36,0	1/1:41,0:40:38.99:123,39,0	1/1:13,0:13:20.21:57,20,0
chr10	81371902	.	AAAC	A	14161.66	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-2.513;DP=599;FS=2.699;HRun=0;HaplotypeScore=103.2786;InbreedingCoeff=0.9965;MQ=57.90;MQ0=3;MQRankSum=-3.093;QD=40.12;ReadPosRankSum=-0.291;VQSLOD=5.4366;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.25:0,72,1602	0/0:8,0:8:24.07:0,24,472	0/0:16,0:8:21.05:0,21,318	0/0:11,0:7:18.06:0,18,336	1/1:0,43:43:99:1704,117,0	0/0:27,0:27:71.98:0,72,631	0/0:11,0:11:23.99:0,24,209	1/1:0,28:25:75.20:1060,75,0	0/0:23,0:23:65.98:0,66,578	1/1:1,22:23:69.16:984,69,0	1/1:0,23:23:63.08:910,63,0	0/0:14,0:14:38.98:0,39,338	0/0:23,0:23:69.21:0,69,1433	0/0:21,0:21:63.18:0,63,1316	1/1:0,22:22:60.19:935,60,0	1/1:0,15:15:36.12:574,36,0	1/1:1,21:22:54.18:858,54,0	1/1:1,15:16:18.75:643,19,0	1/1:1,18:18:54.17:815,54,0	1/1:0,25:25:75.19:1141,75,0	1/1:0,11:11:24.04:355,24,0	0/0:29,0:29:77.91:0,78,676	0/0:17,0:17:50.99:0,51,446	0/0:17,0:18:53.72:0,54,520	1/1:0,24:24:42.14:669,42,0	1/1:1,30:31:90.26:1338,90,0	1/1:0,38:38:99:1555,99,0	1/1:0,13:13:39.13:622,39,0
chr10	81372651	.	TGGCAATTGACAGATTG	T	605.77	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.491;DP=600;FS=1.503;HRun=0;HaplotypeScore=246.2595;InbreedingCoeff=0.9441;MQ=55.94;MQ0=9;MQRankSum=-4.509;QD=75.72;ReadPosRankSum=-2.397;VQSLOD=2.9512;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.13:0,45,3149	0/0:9,0:9:24.08:0,24,1862	0/0:16,0:8:14.23:0,14,572	0/0:10,0:6:13.93:0,14,256	0/0:34,0:34:99:0,102,6797	0/0:24,0:24:72.25:0,72,5247	1/1:0,8:7:15.05:694,15,0	0/0:27,0:21:54.14:0,54,3346	0/0:23,0:23:69.24:0,69,4918	0/0:33,0:33:96.33:0,96,7216	0/0:34,0:33:99:0,99,6563	0/0:17,0:17:51.16:0,51,3487	0/0:16,0:16:48.15:0,48,3122	0/0:26,0:26:78.25:0,78,5709	0/0:25,0:25:75.26:0,75,5648	0/0:22,0:22:57.18:0,57,3809	0/0:11,0:11:33.11:0,33,2577	0/0:12,0:12:36.08:0,36,2588	0/0:20,0:15:45.10:0,45,2956	0/0:24,0:24:66.23:0,66,4815	0/0:28,0:28:78.10:0,78,5253	0/0:20,0:20:60.19:0,60,4054	0/0:20,0:20:60.21:0,60,4200	0/0:24,0:25:58.58:0,59,5198	0/0:22,0:22:57.20:0,57,4094	0/0:31,0:31:93.32:0,93,6625	0/0:28,0:28:75.22:0,75,5066	0/0:19,0:19:57.16:0,57,3955
chr10	81372743	.	GAATAACAAAAAACCCAGGATAGAGAAAACTATCCT	G	26567.53	PASS	AB=0.633;AC=28;AF=0.500;AN=56;BaseQRankSum=14.244;DP=365;FS=12.510;HRun=0;HaplotypeScore=329.5947;InbreedingCoeff=0.7949;MQ=53.15;MQ0=12;MQRankSum=-10.993;QD=193.92;ReadPosRankSum=6.170;VQSLOD=3.2571;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.22:0,63,8481	0/0:9,0:9:27.09:0,27,4052	0/0:22,0:12:36.12:0,36,2172	0/0:15,0:6:12.51:0,13,767	1/1:0,13:13:30.10:2780,30,0	0/0:22,0:22:66.23:0,66,8800	0/0:14,0:14:39.12:0,39,3934	1/1:3,0:3:6:54,6,0	0/0:19,0:19:57.18:0,57,6863	1/1:0,11:11:33.10:2609,33,0	1/1:0,10:10:24.08:1877,24,0	0/0:11,0:11:33.11:0,33,4232	0/0:17,0:17:51.18:0,51,6629	0/0:19,0:19:57.20:0,57,7234	1/1:0,11:11:30.10:2794,30,0	1/1:0,8:8:21.07:1956,21,0	0/1:1,2:3:99:273,0,161	0/1:1,1:2:71.59:274,0,72	1/1:6,2:2:6.02:339,6,0	1/1:0,21:21:57.11:4757,57,0	1/1:0,3:3:3.01:152,3,0	0/0:18,0:18:54.19:0,54,8536	0/0:26,0:26:78.27:0,78,10271	0/0:15,0:15:45.15:0,45,5207	1/1:0,13:13:24.08:2236,24,0	1/1:1,9:10:27.09:2278,27,0	1/1:0,17:17:33.11:3074,33,0	1/1:0,4:4:12.04:1115,12,0
chr10	81373138	.	GTCTGAA	G	911.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.293;DP=633;FS=0.000;HRun=0;HaplotypeScore=131.1450;InbreedingCoeff=0.9451;MQ=62.98;MQ0=14;MQRankSum=-5.966;QD=50.65;ReadPosRankSum=-0.972;VQSLOD=3.3687;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.24:0,69,2415	0/0:3,0:3:9.03:0,9,324	0/0:24,0:19:57.20:0,57,2008	0/0:23,0:14:36.12:0,36,1204	0/0:32,0:32:90.31:0,90,3183	0/0:30,0:30:90.31:0,90,3164	1/1:3,15:18:42.14:1006,42,0	0/0:19,0:19:57.20:0,57,1974	0/0:17,0:17:51.17:0,51,1686	0/0:25,0:24:72.25:0,72,2588	0/0:22,0:22:60.21:0,60,2036	0/0:18,0:18:54.19:0,54,1908	0/0:25,0:25:75.24:0,75,2592	0/0:26,0:26:75.26:0,75,2585	0/0:21,0:21:60.21:0,60,2095	0/0:28,0:28:84.29:0,84,2962	0/0:21,0:21:60.09:0,60,1900	0/0:24,0:24:69.24:0,69,2486	0/0:25,0:21:63.22:0,63,2218	0/0:39,0:39:99:0,114,3798	0/0:23,0:23:69.24:0,69,2486	0/0:17,0:17:48.15:0,48,1595	0/0:24,0:24:69.24:0,69,2410	0/0:15,0:15:42.14:0,42,1466	0/0:27,0:27:78.27:0,78,2771	0/0:23,0:23:66.21:0,66,2115	0/0:24,0:24:72.25:0,72,2588	0/0:16,0:16:45.15:0,45,1622
chr10	81375507	.	CAT	C	147.01	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=3.712;DP=254;FS=1.542;HRun=0;HaplotypeScore=29.4395;InbreedingCoeff=0.3715;MQ=80.28;MQ0=0;MQRankSum=0.423;QD=8.65;ReadPosRankSum=-0.189;VQSLOD=2.8995;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:9.03:0,9,147	0/0:5,0:5:6.02:0,6,103	0/0:11,0:9:3.20:0,3,26	0/1:10,0:6:2.84:3,0,116	0/0:19,0:19:48.15:0,48,791	0/0:9,0:9:24.08:0,24,406	1/1:0,7:7:18.06:237,18,0	0/0:39,0:39:90.31:0,90,1529	0/0:4,0:4:6.02:0,6,103	0/0:8,0:8:24.06:0,24,363	0/0:13,0:13:30.10:0,30,510	0/0:5,0:5:9.03:0,9,154	0/0:6,0:6:12.04:0,12,201	0/0:3,0:3:9.03:0,9,150	0/0:7,0:7:15.04:0,15,226	0/0:3,0:3:9.02:0,9,128	0/0:9,0:9:24.08:0,24,395	0/0:12,0:12:24.08:0,24,398	0/0:16,0:16:48.16:0,48,822	0/0:7,0:7:18.06:0,18,297	0/0:5,0:5:15.05:0,15,257	0/0:8,0:8:15.05:0,15,249	0/0:5,0:5:3.01:0,3,51	0/0:2,0:2:6.02:0,6,103	0/0:14,0:14:33.11:0,33,563	0/0:4,0:4:9.03:0,9,154	0/0:11,0:11:21.07:0,21,350	0/0:9,0:9:21.07:0,21,360
chr10	81376376	.	G	GT	1537.82	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.221;DP=560;FS=1.230;HRun=6;HaplotypeScore=88.0125;InbreedingCoeff=0.9877;MQ=61.61;MQ0=0;MQRankSum=1.241;QD=31.38;ReadPosRankSum=1.017;VQSLOD=3.8912;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.12:0,66,663	0/0:8,0:8:24.04:0,24,238	0/0:13,0:13:31.23:0,31,293	0/0:8,0:7:18.02:0,18,175	0/0:36,0:36:96.21:0,96,979	0/0:23,0:23:60.14:0,60,612	0/0:7,0:7:21.05:0,21,214	0/0:31,0:31:84.17:0,84,849	0/0:16,0:16:45.10:0,45,459	0/0:30,0:30:84.18:0,84,850	0/0:28,0:28:78.17:0,78,796	0/0:23,0:23:60.13:0,60,612	1/1:2,21:23:60.19:755,60,0	1/1:3,23:26:72.23:905,72,0	0/0:18,0:18:39.07:0,39,391	0/0:21,0:21:57.13:0,57,581	0/0:9,0:9:21.05:0,21,214	0/0:17,0:17:44.95:0,45,458	0/0:19,0:19:57.11:0,57,573	0/0:33,0:33:93.17:0,93,929	0/0:15,0:15:39.08:0,39,398	0/0:17,0:17:42.09:0,42,428	0/0:24,0:24:63.12:0,63,635	0/0:12,0:12:27.06:0,27,275	0/0:16,0:16:42.09:0,42,429	0/0:22,0:22:60.13:0,60,612	0/0:34,0:34:93.21:0,93,948	0/0:8,0:8:21.05:0,21,214
chr10	81377198	.	GT	G	194.68	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.901;DP=420;FS=5.054;HRun=4;HaplotypeScore=39.0743;InbreedingCoeff=0.9475;MQ=79.12;MQ0=0;MQRankSum=-0.791;QD=21.63;ReadPosRankSum=-0.287;VQSLOD=2.4298;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.12:0,39,529	0/0:10,0:10:30.08:0,30,388	0/0:16,0:15:21.86:0,22,432	0/0:7,0:6:12.04:0,12,167	0/0:24,0:24:72.24:0,72,1007	0/0:12,0:12:30.10:0,30,420	1/1:0,9:9:24.07:288,24,0	0/0:34,0:34:93.29:0,93,1272	0/0:16,0:16:48.15:0,48,656	0/0:17,0:17:51.17:0,51,706	0/0:23,0:23:66.22:0,66,923	0/0:7,0:7:21.07:0,21,294	0/0:10,0:10:30.10:0,30,419	0/0:14,0:14:39.13:0,39,546	0/0:17,0:17:51.16:0,51,700	0/0:9,0:9:27.08:0,27,361	0/0:14,0:14:39.10:0,39,522	0/0:9,0:9:26.61:0,27,322	0/0:13,0:13:39.13:0,39,546	0/0:26,0:26:69.17:0,69,927	0/0:7,0:7:21.07:0,21,293	0/0:8,0:8:24.07:0,24,320	0/0:14,0:14:42.14:0,42,588	0/0:8,0:8:21.07:0,21,294	0/0:25,0:25:75.25:0,75,1041	0/0:21,0:21:60.20:0,60,840	0/0:28,0:27:78.26:0,78,1089	0/0:9,0:9:27.09:0,27,378
chr10	81378754	.	TC	T	1290.26	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=6.893;DP=651;FS=5.436;HRun=1;HaplotypeScore=61.8196;InbreedingCoeff=0.9870;MQ=53.95;MQ0=14;MQRankSum=3.115;QD=33.08;ReadPosRankSum=2.477;VQSLOD=3.2771;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:37:99:1384,99,0	0/0:7,0:7:18.06:0,18,286	./.	./.	0/0:28,0:26:69.06:0,69,1045	0/0:13,0:11:30.10:0,30,479	0/0:25,0:25:54.18:0,54,861	0/0:25,0:15:39.06:0,39,550	0/0:25,0:24:66.15:0,66,1000	0/0:28,0:25:74.05:0,74,1131	0/0:22,0:20:60.18:0,60,904	0/0:30,0:30:90.28:0,90,1409	0/0:27,0:26:63.20:0,63,981	0/0:26,0:26:63.21:0,63,1006	0/0:26,0:25:69.22:0,69,1079	0/0:20,0:20:60.20:0,60,959	0/0:31,0:30:90.31:0,90,1428	0/0:17,0:17:45.14:0,45,695	0/0:15,0:10:30.10:0,30,480	0/0:23,0:23:63.20:0,63,984	0/0:34,0:32:90.31:0,90,1434	0/0:23,0:22:54.17:0,54,840	0/0:31,0:31:66.68:0,67,1032	0/0:30,0:30:78.23:0,78,1199	0/0:27,0:27:78.27:0,78,1245	0/0:32,0:30:87.30:0,87,1391	0/0:27,0:27:72.24:0,72,1131	0/0:7,0:7:21.07:0,21,336
chr10	81379004	.	C	CTTT	12117.40	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-6.120;DP=640;FS=17.428;HRun=11;HaplotypeScore=103.3190;InbreedingCoeff=0.8217;MQ=69.32;MQ0=5;MQRankSum=-2.409;QD=21.56;ReadPosRankSum=-0.449;VQSLOD=1.7194;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:34:24.17:69,24,0	0/0:12,0:14:26.88:0,27,275	0/0:34,0:25:4.41:0,4,300	0/0:26,0:15:8.60:0,9,70	1/1:6,18:26:57.17:894,57,0	1/1:12,1:24:30.10:435,30,0	1/1:19,0:17:7.54:57,8,0	1/1:5,10:19:42:566,42,0	1/1:5,3:19:39.09:600,39,0	1/1:10,17:27:16.02:648,16,0	1/1:6,11:19:36.74:488,37,0	1/1:11,8:23:21.07:354,21,0	1/1:9,8:17:18.06:316,18,0	1/1:6,9:21:14.53:199,15,0	1/1:3,22:27:48.14:866,48,0	1/1:7,13:25:43.30:670,43,0	1/1:6,20:26:48.14:865,48,0	1/1:3,15:19:42.12:757,42,0	1/1:12,6:18:23.59:327,24,0	1/1:7,9:17:22.75:293,23,0	1/1:4,8:13:9.01:136,9,0	1/1:3,2:12:20.98:263,21,0	1/1:6,5:20:20.77:340,21,0	1/1:7,1:22:28.81:392,29,0	1/1:4,18:24:9.19:415,9,0	1/1:8,25:36:81.22:1345,81,0	1/1:10,21:34:44.16:713,44,0	1/1:8,0:8:9.01:109,9,0
chr10	81379376	.	T	TG	509.98	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.223;DP=619;FS=0.000;HRun=2;HaplotypeScore=66.3743;InbreedingCoeff=0.9946;MQ=67.27;MQ0=2;MQRankSum=-0.727;QD=23.18;ReadPosRankSum=-0.601;VQSLOD=3.1298;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.21:0,66,818	0/0:10,0:10:27.08:0,27,335	0/0:20,0:18:51.16:0,51,632	0/0:19,0:19:54.16:0,54,657	0/0:18,0:18:45.14:0,45,558	0/0:15,0:15:45.14:0,45,558	1/1:1,21:22:42.14:605,42,0	0/0:28,0:28:81.25:0,81,994	0/0:28,0:28:78.25:0,78,966	0/0:13,0:13:36.10:0,36,435	0/0:19,0:19:57.17:0,57,695	0/0:26,0:26:75.21:0,75,905	0/0:19,0:19:54.17:0,54,669	0/0:18,0:18:45.14:0,45,558	0/0:26,0:26:78.23:0,78,955	0/0:25,0:25:75.22:0,75,917	0/0:53,0:53:99:0,147,1822	0/0:22,0:22:63.20:0,63,780	0/0:18,0:17:51.16:0,51,631	0/0:18,0:17:48.14:0,48,582	0/0:50,0:50:99:0,128,1555	0/0:19,0:19:54.17:0,54,668	0/0:10,0:10:24.08:0,24,297	0/0:31,0:31:93.29:0,93,1153	0/0:27,0:27:78.21:0,78,951	0/0:13,0:13:36.11:0,36,446	0/0:20,0:20:57.18:0,57,699	0/0:8,0:8:24.08:0,24,297
chr10	81379837	.	G	GT	9679.67	PASS	AB=0.579;AC=46;AF=0.821;AN=56;BaseQRankSum=-7.056;DP=535;FS=0.000;HRun=10;HaplotypeScore=53.1142;InbreedingCoeff=0.6487;MQ=69.49;MQ0=9;MQRankSum=-0.261;QD=20.77;ReadPosRankSum=0.900;VQSLOD=5.5956;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:28:42.09:640,42,0	0/0:14,0:14:21.88:0,22,214	0/0:22,0:11:8.78:0,9,59	0/0:19,0:12:19.93:0,20,146	1/1:6,18:26:50.79:496,51,0	1/1:0,16:16:39.10:416,39,0	0/0:12,0:13:31.94:0,32,243	1/1:15,16:32:28.27:442,28,0	1/1:3,11:14:27.07:288,27,0	1/1:3,14:18:44.89:437,45,0	1/1:3,23:28:68.72:664,69,0	0/1:5,12:17:7.18:342,0,7	1/1:2,13:15:33.08:352,33,0	1/1:4,11:16:5.26:246,5,0	1/1:2,17:20:53.97:557,54,0	1/1:3,11:14:30.08:320,30,0	1/1:3,22:26:62.99:654,63,0	0/1:4,12:16:10.18:313,0,10	1/1:3,11:14:11.36:304,11,0	1/1:7,24:32:23.93:627,24,0	1/1:2,10:14:2.08:184,2,0	1/1:3,15:18:42.07:435,42,0	1/1:5,15:19:8.82:301,9,0	1/1:3,14:18:44.95:462,45,0	1/1:2,15:18:30.73:445,31,0	1/1:5,12:19:38.87:378,39,0	1/1:9,16:25:14.42:346,14,0	1/1:0,2:2:3.01:32,3,0
chr10	81381038	.	T	TA	385.27	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.475;DP=633;FS=15.818;HRun=0;HaplotypeScore=56.1316;InbreedingCoeff=0.9993;MQ=78.43;MQ0=0;MQRankSum=-1.081;QD=32.11;ReadPosRankSum=0.737;VQSLOD=2.0844;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.12:0,42,568	0/0:17,0:17:51.17:0,51,713	0/0:18,0:18:51.14:0,51,676	0/0:13,0:13:39.10:0,39,519	0/0:30,0:30:87.29:0,87,1217	0/0:29,0:29:87.28:0,87,1200	1/1:0,12:12:30.10:480,30,0	0/0:29,0:29:87.29:0,87,1214	0/0:25,0:25:75.24:0,75,1030	0/0:31,0:31:90.29:0,90,1244	0/0:30,0:30:90.30:0,90,1257	0/0:18,0:18:54.17:0,54,738	0/0:34,0:34:99:0,102,1409	0/0:22,0:22:66.22:0,66,923	0/0:26,0:26:78.25:0,78,1067	0/0:27,0:27:81.27:0,81,1133	0/0:18,0:18:54.15:0,54,734	0/0:16,0:16:48.16:0,48,669	0/0:21,0:21:63.21:0,63,881	0/0:29,0:29:84.27:0,84,1157	0/0:21,0:21:63.21:0,63,879	0/0:19,0:19:57.19:0,57,797	0/0:17,0:17:48.15:0,48,651	0/0:22,0:22:66.22:0,66,923	0/0:17,0:17:51.17:0,51,712	0/0:27,0:27:78.26:0,78,1087	0/0:35,0:35:99:0,102,1368	0/0:14,0:14:42.14:0,42,587
chr10	81382697	.	A	AAT	19225.85	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=7.590;DP=621;FS=5.867;HRun=0;HaplotypeScore=99.1899;InbreedingCoeff=0.9987;MQ=81.18;MQ0=0;MQRankSum=-5.094;QD=49.17;ReadPosRankSum=0.876;VQSLOD=5.4495;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.24:0,72,1060	0/0:9,0:9:24.08:0,24,351	0/0:21,0:21:57.18:0,57,815	0/0:14,0:14:39.11:0,39,547	1/1:2,40:42:99:2039,111,0	0/0:22,0:22:63.21:0,63,928	1/1:2,18:20:54.19:1011,54,0	1/1:7,40:47:99:2269,126,0	0/0:13,0:13:33.11:0,33,485	1/1:1,19:20:60.20:1097,60,0	1/1:2,31:33:81.28:1496,81,0	0/0:20,0:20:54.18:0,54,794	0/0:19,0:19:54.18:0,54,795	0/0:21,0:21:60.20:0,60,883	1/1:1,25:26:63.22:1179,63,0	1/1:0,12:12:36.12:673,36,0	1/1:1,23:24:69.24:1291,69,0	1/1:0,7:7:21.07:393,21,0	1/1:2,12:14:42.06:676,42,0	1/1:0,32:32:93.32:1722,93,0	1/1:1,9:10:24.08:449,24,0	0/0:25,0:25:75.25:0,75,1104	0/0:30,0:30:90.27:0,90,1283	0/0:10,0:10:30.09:0,30,422	1/1:2,31:34:81.28:1515,81,0	1/1:1,19:20:57.16:1004,57,0	1/1:2,34:37:96.33:1795,96,0	1/1:0,12:12:33.11:618,33,0
chr10	81383111	.	AAT	A	615.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.176;DP=544;FS=4.796;HRun=0;HaplotypeScore=116.3938;InbreedingCoeff=0.9707;MQ=71.05;MQ0=0;MQRankSum=0.786;QD=26.74;ReadPosRankSum=-0.238;VQSLOD=4.8945;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:51.17:710,51,0	0/0:13,0:13:39.13:0,39,692	0/0:9,0:9:20.98:0,21,274	0/0:9,0:9:20.97:0,21,276	0/0:28,0:28:81.24:0,81,1389	0/0:23,0:23:69.17:0,69,1086	0/0:8,0:8:21.07:0,21,374	0/0:23,0:22:62.87:0,63,915	0/0:16,0:16:48.10:0,48,734	0/0:21,0:21:60.19:0,60,1005	0/0:23,0:23:66.21:0,66,1150	0/0:17,0:17:48.15:0,48,823	0/0:20,0:20:60.19:0,60,1014	0/0:18,0:18:54.17:0,54,931	0/0:24,0:24:69.24:0,69,1224	0/0:18,0:18:54.13:0,54,924	0/0:22,0:22:63.10:0,63,997	0/0:21,0:21:57.11:0,57,924	0/0:22,0:22:60.03:0,60,977	0/0:43,0:43:99:0,123,2064	0/0:5,0:5:15.05:0,15,268	0/0:20,0:20:60.17:0,60,996	0/0:24,0:24:72.19:0,72,1160	0/0:9,0:9:23.99:0,24,352	0/0:18,0:18:51.17:0,51,882	0/0:19,0:19:54.19:0,54,958	0/0:30,0:30:88.47:0,88,1459	0/0:18,0:18:54.19:0,54,965
chr10	81383209	.	AG	A	2807.85	PASS	AB=0.989;AC=27;AF=0.482;AN=56;BaseQRankSum=17.033;DP=574;FS=4.864;HRun=1;HaplotypeScore=203.9540;InbreedingCoeff=0.7159;MQ=62.29;MQ0=2;MQRankSum=-12.937;QD=8.23;ReadPosRankSum=0.748;VQSLOD=1.0917;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:35.44:0,35,813	0/0:9,0:9:27.09:0,27,432	0/0:20,0:15:31.72:0,32,468	0/0:21,0:15:32.39:0,32,504	0/1:25,0:25:1.54:219,0,2	0/0:27,0:27:78.22:0,78,1165	1/1:4,16:20:57.12:699,57,0	0/1:18,0:18:2.06:110,0,2	0/0:17,0:17:48.13:0,48,720	1/1:29,0:29:20.29:184,20,0	1/1:27,0:27:49.26:250,49,0	0/0:17,0:17:48.16:0,48,765	0/0:13,0:13:39.13:0,39,613	0/0:17,0:17:48.16:0,48,765	1/1:26,0:26:38.94:218,39,0	1/1:19,0:19:38.44:148,38,0	1/1:19,0:19:10.35:120,10,0	0/1:16,1:17:0.22:68,0,0	1/1:17,0:17:2.39:65,2,0	1/1:41,0:41:9.61:275,10,0	0/1:5,0:5:4.46:10,0,4	0/0:24,0:24:69.22:0,69,1079	0/0:27,0:27:81.28:0,81,1294	0/0:21,0:21:57.19:0,57,905	1/1:21,0:21:30.28:214,30,0	0/1:22,0:22:36.56:83,0,37	1/1:26,0:26:63.06:279,63,0	1/1:9,0:9:19.10:72,19,0
chr10	81383218	.	CA	C	7613.46	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=17.127;DP=601;FS=2.895;HRun=9;HaplotypeScore=201.7874;InbreedingCoeff=0.9934;MQ=54.80;MQ0=6;MQRankSum=-13.216;QD=22.33;ReadPosRankSum=1.211;VQSLOD=2.7358;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:53.75:0,54,685	0/0:9,0:9:21.06:0,21,242	0/0:24,0:14:18.72:0,19,264	0/0:26,0:15:28.84:0,29,326	1/1:3,19:22:54.02:490,54,0	0/0:22,0:22:54.16:0,54,623	1/1:4,16:20:37.72:417,38,0	1/1:4,19:22:41.97:382,42,0	0/0:20,0:20:57.14:0,57,644	1/1:3,28:31:84.03:764,84,0	1/1:3,23:26:67.16:626,67,0	0/0:19,0:19:51.15:0,51,584	0/0:0,0:18:39.77:0,40,202	0/0:6,0:22:36.99:0,37,206	1/1:1,26:27:77.96:699,78,0	1/1:2,16:18:48.03:441,48,0	1/1:6,17:22:47.82:432,48,0	1/1:4,13:17:41.05:361,41,0	1/1:5,15:19:34.49:317,34,0	1/1:6,31:37:93.03:851,93,0	1/1:1,5:6:11.71:94,12,0	0/0:26,0:26:72.20:0,72,821	0/0:26,0:26:60.18:0,60,693	0/0:24,0:24:57.17:0,57,658	1/1:1,19:20:53.95:481,54,0	1/1:5,13:18:38.97:356,39,0	1/1:0,25:25:75.04:683,75,0	1/1:0,8:8:24.01:219,24,0
chr10	81383234	.	A	AAAAC	17806.93	PASS	AB=0.781;AC=42;AF=0.750;AN=56;BaseQRankSum=2.866;DP=660;FS=1.049;HRun=0;HaplotypeScore=206.9367;InbreedingCoeff=0.8172;MQ=51.66;MQ0=12;MQRankSum=-7.073;QD=33.79;ReadPosRankSum=2.229;VQSLOD=5.0540;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:74.12:0,74,1038	0/0:5,0:5:15.05:0,15,246	0/0:29,0:18:23.55:0,24,287	0/0:25,0:17:15.62:0,16,204	1/1:30,0:29:42.14:825,42,0	1/1:5,12:18:30.10:732,30,0	1/1:20,0:20:22.23:622,22,0	1/1:31,0:30:42.14:821,42,0	1/1:5,12:19:33.11:804,33,0	1/1:35,0:35:66.22:1315,66,0	1/1:25,0:25:36.12:734,36,0	1/1:6,15:21:33.11:791,33,0	0/0:21,0:21:42.14:0,42,685	0/0:18,0:18:30.03:0,30,473	1/1:31,0:31:63.22:1284,63,0	1/1:18,0:18:36.12:747,36,0	1/1:27,0:23:13.27:555,13,0	0/1:18,0:18:28.07:342,0,28	1/1:19,0:18:21.07:416,21,0	1/1:35,0:35:63.21:1295,63,0	1/1:7,0:7:15.05:305,15,0	1/1:9,25:35:66.23:1540,66,0	1/1:9,20:30:36.03:855,36,0	0/1:7,24:31:3.99:978,0,4	1/1:23,0:23:42.14:846,42,0	1/1:18,0:18:36.12:708,36,0	1/1:27,0:27:48.16:981,48,0	1/1:8,0:8:15.05:309,15,0
chr10	81383242	.	C	CAAAT	21727.99	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=8.389;DP=679;FS=8.112;HRun=0;HaplotypeScore=185.0994;InbreedingCoeff=0.4983;MQ=52.72;MQ0=12;MQRankSum=-8.842;QD=39.87;ReadPosRankSum=4.922;VQSLOD=4.3683;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.03:0,96,1442	0/0:7,0:7:18.04:0,18,308	0/0:29,0:18:30.14:0,30,495	0/0:22,0:14:26.24:0,26,414	1/1:4,24:28:53.84:1136,54,0	0/1:17,0:17:43.85:452,0,44	1/1:7,12:21:30.24:876,30,0	1/1:22,11:33:74.76:1181,75,0	0/1:19,0:19:27.87:531,0,28	1/1:10,29:39:99:2215,108,0	1/1:12,13:25:68.56:1162,69,0	0/1:21,0:21:54.83:494,0,55	0/0:23,0:23:57.10:0,57,914	0/0:20,0:20:47.95:0,48,707	1/1:7,24:34:78.09:1788,78,0	1/1:4,18:22:45.07:1031,45,0	1/1:18,8:23:39.57:747,40,0	1/1:10,9:19:9.61:607,10,0	1/1:8,11:18:39.01:801,39,0	1/1:9,25:34:99:1945,102,0	1/1:3,4:7:18.06:472,18,0	0/1:33,0:33:90.67:974,0,91	0/1:29,0:29:99:512,0,104	0/1:35,0:34:90.57:645,0,91	1/1:9,13:22:59.94:1238,60,0	1/1:4,17:23:51.03:1073,51,0	1/1:8,20:29:68.90:1427,69,0	1/1:2,5:7:18.01:421,18,0
chr10	81383731	.	ATG	A	2634.26	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-0.103;DP=349;FS=5.859;HRun=0;HaplotypeScore=54.7023;InbreedingCoeff=0.9446;MQ=59.48;MQ0=1;MQRankSum=6.310;QD=29.93;ReadPosRankSum=3.068;VQSLOD=5.2021;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.29:0,84,1439	0/0:7,0:7:21.07:0,21,360	0/0:7,0:7:21.07:0,21,331	0/0:6,0:6:8.79:0,9,144	0/0:15,0:15:39.13:0,39,667	1/1:4,13:17:36.12:473,36,0	0/0:6,0:6:15.01:0,15,225	0/0:23,0:23:57.05:0,57,910	1/1:2,3:5:9.03:118,9,0	0/0:18,0:18:51.06:0,51,797	0/0:13,0:13:30.10:0,30,513	1/1:0,7:7:21.07:276,21,0	1/1:0,12:12:36.12:473,36,0	1/1:0,10:10:27.09:355,27,0	0/0:13,0:13:36.12:0,36,610	0/0:17,0:17:42.14:0,42,718	0/0:10,0:10:24.08:0,24,399	0/0:5,0:5:11.07:0,11,159	0/0:12,0:12:18.05:0,18,270	0/0:17,0:17:42.14:0,42,716	0/0:2,0:2:6.02:0,6,103	1/1:1,14:14:36.12:473,36,0	1/1:1,12:13:26.76:354,27,0	1/1:1,8:9:24.08:315,24,0	0/0:7,0:7:12.04:0,12,205	0/0:20,0:20:54.18:0,54,913	0/0:21,0:21:51.17:0,51,872	0/0:12,0:12:36.12:0,36,617
chr10	81383771	.	A	AT	600.15	PASS	AB=0.972;AC=8;AF=0.267;AN=30;BaseQRankSum=-4.069;DP=220;FS=22.645;HRun=9;HaplotypeScore=41.4078;InbreedingCoeff=0.4578;MQ=69.47;MQ0=1;MQRankSum=-1.724;QD=8.11;ReadPosRankSum=1.828;VQSLOD=0.1968;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:63.13:681,63,0	0/1:7,1:8:9.18:9,0,158	0/0:9,0:9:20.99:0,21,182	0/1:4,0:5:3.36:3,0,47	./.	0/0:12,0:12:20.96:0,21,178	./.	0/1:10,0:10:0:0,0,0	0/0:5,0:5:8.99:0,9,78	1/1:13,0:13:0.47:1,0,0	./.	0/0:8,0:8:20.99:0,21,182	0/0:8,0:8:20.97:0,21,178	0/0:8,0:8:24:0,24,208	./.	./.	./.	./.	./.	./.	./.	0/0:7,0:6:12:0,12,104	0/0:7,0:7:20.98:0,21,178	0/0:5,0:5:9:0,9,78	./.	0/1:14,0:14:0:0,0,0	./.	./.
chr10	81383818	.	C	CT	708.30	PASS	AB=0.556;AC=15;AF=0.625;AN=24;BaseQRankSum=-2.557;DP=110;FS=1.660;HRun=11;HaplotypeScore=36.6547;InbreedingCoeff=0.4857;MQ=50.37;MQ0=15;MQRankSum=0.958;QD=12.88;ReadPosRankSum=1.116;VQSLOD=2.8149;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:20:25.23:0,25,72	0/0:5,0:5:5.97:0,6,46	0/0:2,0:2:1.24:0,1,3	0/0:6,0:4:2.63:0,3,11	./.	1/1:5,8:13:2.65:219,3,0	./.	./.	0/1:1,4:5:11.16:79,0,11	./.	./.	1/1:2,3:5:14.86:136,15,0	1/1:2,0:6:17.04:85,17,0	1/1:7,0:9:22.48:113,22,0	./.	./.	./.	./.	./.	./.	./.	1/1:3,1:2:3.01:30,3,0	1/1:4,3:7:9.02:91,9,0	1/1:2,2:4:6.90:63,7,0	./.	./.	./.	./.
chr10	81384478	.	AG	A	7485.98	PASS	AB=0.550;AC=31;AF=0.554;AN=56;BaseQRankSum=5.986;DP=367;FS=33.536;HRun=2;HaplotypeScore=36.8815;InbreedingCoeff=0.8875;MQ=55.50;MQ0=0;MQRankSum=-2.239;QD=34.34;ReadPosRankSum=0.199;VQSLOD=2.3909;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.19:0,69,1008	0/0:5,0:5:15.05:0,15,221	0/0:5,0:5:12.04:0,12,180	0/0:3,0:3:6.02:0,6,90	1/1:0,18:18:45.15:582,45,0	0/0:13,0:13:36.12:0,36,538	1/1:0,7:7:18.06:233,18,0	1/1:1,28:29:87.27:1115,87,0	0/0:15,0:15:33.11:0,33,492	1/1:0,12:12:36.11:452,36,0	1/1:0,18:18:51.12:640,51,0	0/0:16,0:16:36.10:0,36,502	0/0:8,0:8:21.07:0,21,314	0/0:19,0:19:48.14:0,48,674	1/1:0,13:13:39.13:505,39,0	0/1:2,9:11:56.78:317,0,57	1/1:0,6:6:9.03:116,9,0	1/1:0,15:15:45.15:583,45,0	1/1:0,12:12:36.11:455,36,0	1/1:1,21:22:57.19:738,57,0	1/1:1,3:4:9.03:117,9,0	0/0:9,0:9:27.09:0,27,402	0/0:14,0:14:39.12:0,39,563	0/0:16,0:16:45.14:0,45,654	1/1:0,18:18:45.15:583,45,0	1/1:0,7:7:18.06:234,18,0	1/1:0,16:16:36.12:466,36,0	1/1:0,10:10:27.09:350,27,0
chr10	81385033	.	GACAAAACAAA	G	15827.75	PASS	AC=30;AF=0.556;AN=54;BaseQRankSum=2.773;DP=650;FS=0.000;HRun=0;HaplotypeScore=218.8419;InbreedingCoeff=0.9335;MQ=66.80;MQ0=7;MQRankSum=-9.212;QD=41.76;ReadPosRankSum=-0.188;VQSLOD=4.0939;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:75.20:0,75,3516	0/0:12,0:12:30.10:0,30,1462	0/0:34,0:25:23.96:0,24,496	0/0:27,0:21:0.07:0,0,540	1/1:9,25:34:60.05:1457,60,0	0/0:8,0:25:45.15:0,45,1851	1/1:9,10:19:17.42:453,17,0	1/1:15,3:18:9.03:166,9,0	0/0:9,0:30:45.15:0,45,1967	1/1:9,19:28:57.17:1551,57,0	1/1:9,18:27:51.13:1411,51,0	0/0:8,0:15:21.07:0,21,780	0/0:19,0:19:42.14:0,42,2009	0/0:16,0:16:39.12:0,39,1824	1/1:8,18:26:39.13:1166,39,0	1/1:8,23:31:51.17:1524,51,0	1/1:7,12:19:21.07:629,21,0	1/1:10,11:21:15.05:454,15,0	1/1:15,14:27:39.09:1012,39,0	1/1:5,16:21:42.07:1116,42,0	1/1:5,5:10:5.88:118,6,0	0/0:10,0:20:45.14:0,45,1609	0/0:6,0:18:33.11:0,33,1363	0/0:3,0:16:24.08:0,24,1052	1/1:8,22:30:54.19:1601,54,0	1/1:10,20:30:57.18:1538,57,0	1/1:9,27:35:54.19:1632,54,0	./.
chr10	81385532	.	ATGGTGGTGGTGG	A	2135.48	PASS	AB=1.000;AC=29;AF=0.580;AN=50;BaseQRankSum=5.280;DP=397;FS=10.170;HRun=0;HaplotypeScore=123.2175;InbreedingCoeff=0.4541;MQ=68.86;MQ0=5;MQRankSum=-4.188;QD=10.03;ReadPosRankSum=1.457;VQSLOD=1.9806;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:51.01:0,51,760	0/0:2,0:2:6.02:0,6,197	0/0:24,0:23:48.09:0,48,1275	0/0:16,0:14:29.78:0,30,690	./.	0/0:18,0:18:5.96:0,6,104	0/0:29,0:29:26.63:0,27,260	1/1:8,3:10:9.03:217,9,0	0/1:8,0:8:84.28:84,0,91	1/1:5,6:11:4.26:42,4,0	1/1:4,3:7:5.89:37,6,0	1/1:17,0:17:3:28,3,0	1/1:10,0:10:2.60:10,3,0	0/1:17,0:17:48.05:48,0,51	1/1:12,0:12:5.89:166,6,0	1/1:11,1:12:6.02:167,6,0	1/1:25,0:24:3.01:75,3,0	1/1:10,0:9:9.03:258,9,0	1/1:9,0:7:9.91:166,10,0	0/0:4,6:10:3.01:0,3,62	0/0:29,0:29:3.48:0,3,52	./.	0/0:5,0:5:5.12:0,5,94	0/1:38,0:38:29.42:29,0,63	./.	1/1:1,5:6:11.99:209,12,0	1/1:15,0:14:24.08:599,24,0	1/1:5,0:5:6.02:169,6,0
chr10	81385544	.	GTGGTGGTGGTGGTGCTGCTGCTGCTGC	G	3551.48	PASS	AB=1.000;AC=31;AF=0.620;AN=50;BaseQRankSum=5.808;DP=342;FS=9.489;HRun=0;HaplotypeScore=146.3343;InbreedingCoeff=0.3101;MQ=56.00;MQ0=15;MQRankSum=-4.871;QD=15.31;ReadPosRankSum=5.865;VQSLOD=1.3581;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:51.01:0,51,787	0/0:3,0:2:6.02:0,6,197	0/0:19,0:18:48.09:0,48,1275	0/0:12,0:10:29.78:0,30,690	./.	0/1:10,0:10:24.69:25,0,95	0/1:25,0:23:54.84:55,0,258	1/1:8,0:7:8.99:217,9,0	0/1:9,0:9:12.17:87,0,12	1/1:8,0:7:4.26:42,4,0	1/1:5,0:5:5.89:37,6,0	1/1:20,0:19:2.88:29,3,0	1/1:8,0:8:3.01:62,3,0	0/1:15,0:14:39.90:97,0,40	1/1:1,11:11:5.89:290,6,0	1/1:2,7:9:6.02:384,6,0	1/1:5,17:21:4.76:167,5,0	1/1:3,10:11:8.98:526,9,0	1/1:6,0:4:9.91:202,10,0	0/0:8,0:8:3.01:0,3,62	0/0:22,0:20:5.30:0,5,57	./.	0/0:3,0:3:5.12:0,5,94	0/1:38,0:38:40.72:41,0,62	./.	1/1:7,0:7:11.93:209,12,0	1/1:11,0:10:24.08:674,24,0	1/1:1,5:5:6.02:407,6,0
chr10	81385550	.	GTGGTGGTGCTGCTGCTGC	G	2892.28	PASS	AB=0.769;AC=34;AF=0.680;AN=50;BaseQRankSum=2.432;DP=318;FS=0.000;HRun=0;HaplotypeScore=100.1566;InbreedingCoeff=0.3923;MQ=48.81;MQ0=19;MQRankSum=-1.926;QD=13.15;ReadPosRankSum=4.193;VQSLOD=1.4499;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:6.69:0,7,81	0/0:3,0:2:6.02:0,6,98	0/0:14,0:13:35.83:0,36,480	0/0:11,0:9:11.97:0,12,264	./.	1/1:10,0:10:18.06:297,18,0	0/1:25,0:22:29.55:522,0,30	1/1:7,0:6:6.49:85,6,0	0/1:1,6:7:13.02:278,0,13	1/1:8,0:7:2.37:8,2,0	./.	1/1:4,17:19:2.88:97,3,0	1/1:1,0:6:3.01:71,3,0	1/1:2,0:13:6.02:170,6,0	1/1:12,0:11:5.89:161,6,0	1/1:9,0:9:6.02:199,6,0	1/1:22,0:21:2.14:68,2,0	1/1:13,0:11:9.03:250,9,0	1/1:4,0:2:2.99:41,3,0	0/0:9,0:9:2.97:0,3,20	0/0:18,0:14:3.73:0,4,17	./.	1/1:3,0:3:3.01:49,3,0	1/1:1,33:34:6.01:156,6,0	0/0:11,0:10:0:0,0,0	1/1:7,0:7:5.99:58,6,0	1/1:11,0:10:24.02:311,24,0	1/1:6,0:5:6.02:221,6,0
chr10	81385628	.	ATAGCGATGGTGGTGGTGGTGGTGGTGGTGGTGG	A	767.97	PASS	AB=0.943;AC=8;AF=0.148;AN=54;BaseQRankSum=1.772;DP=281;FS=27.102;HRun=0;HaplotypeScore=209.6849;InbreedingCoeff=-0.0151;MQ=48.39;MQ0=9;MQRankSum=-2.043;QD=8.26;ReadPosRankSum=-2.013;VQSLOD=0.8017;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:16.01:0,16,1000	./.	0/0:27,0:10:4.63:0,5,518	0/0:32,0:15:3.68:0,4,445	0/1:5,0:5:0:0,0,0	0/0:9,0:10:30.09:0,30,1641	0/0:23,0:23:56.23:0,56,2285	0/0:8,0:8:18.52:0,19,673	0/0:5,0:5:5.05:0,5,160	0/0:7,0:6:18.06:0,18,719	0/0:3,0:3:6.02:0,6,207	0/1:16,0:15:99:113,0,1008	0/0:3,0:3:6.02:0,6,198	0/0:9,0:9:17.01:0,17,579	0/1:14,0:14:94.40:94,0,404	0/0:6,0:6:15.04:0,15,353	0/1:10,0:10:99:169,0,178	0/1:9,0:8:14.58:238,0,15	0/1:10,11:19:99:264,0,385	0/0:3,0:2:3.01:0,3,72	1/1:18,0:14:1.36:4,1,0	0/0:3,0:3:9:0,9,180	0/0:6,0:5:11.77:0,12,461	0/0:13,0:13:15.05:0,15,684	0/0:5,0:5:8.82:0,9,115	0/0:3,0:3:8.98:0,9,272	0/0:6,0:6:15.05:0,15,464	0/0:2,0:2:2.98:0,3,38
chr10	81385827	.	G	GT	7904.06	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=-5.220;DP=386;FS=3.614;HRun=7;HaplotypeScore=42.9750;InbreedingCoeff=0.8215;MQ=65.62;MQ0=0;MQRankSum=-1.675;QD=28.33;ReadPosRankSum=0.459;VQSLOD=5.2837;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:42.02:0,42,396	0/0:3,0:3:6:0,6,58	0/0:7,0:5:0.58:0,1,50	0/1:6,0:4:3.91:4,0,17	1/1:0,20:20:57.13:672,57,0	0/0:14,0:14:39.06:0,39,376	0/1:9,0:9:5.78:36,0,6	1/1:8,35:43:99:1194,105,0	0/0:10,0:10:23.87:0,24,219	1/1:0,17:17:51.13:592,51,0	1/1:2,17:19:51.09:591,51,0	0/0:15,0:15:36.04:0,36,341	0/0:7,0:7:17.85:0,18,153	0/0:11,0:11:30.01:0,30,279	1/1:1,10:12:30.09:362,30,0	1/1:0,13:13:39.05:452,39,0	1/1:2,25:27:72.19:854,72,0	1/1:1,20:21:51.16:616,51,0	1/1:3,17:20:48.09:541,48,0	1/1:1,7:8:21.06:253,21,0	1/1:2,8:10:24.07:290,24,0	0/0:5,0:5:15.01:0,15,139	0/0:11,0:11:27.04:0,27,260	0/0:10,0:10:26.99:0,27,246	1/1:2,15:17:45.14:543,45,0	1/1:4,8:12:21.06:253,21,0	1/1:3,18:19:48.15:579,48,0	1/1:2,2:4:6.02:72,6,0
chr10	81386080	.	TA	T	12476.18	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=13.611;DP=549;FS=3.300;HRun=2;HaplotypeScore=63.5702;InbreedingCoeff=0.9981;MQ=74.16;MQ0=0;MQRankSum=-2.981;QD=36.16;ReadPosRankSum=0.279;VQSLOD=5.3438;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:36.12:0,36,539	0/0:7,0:7:21.07:0,21,314	0/0:13,0:13:38.77:0,39,509	0/0:10,0:10:30.06:0,30,379	1/1:0,36:36:99:1318,102,0	0/0:23,0:23:69.20:0,69,993	0/0:18,0:18:51.16:0,51,746	1/1:1,50:51:99:1919,150,0	0/0:22,0:22:66.22:0,66,989	1/1:1,18:19:54.14:671,54,0	1/1:0,26:26:75.24:973,75,0	0/0:10,0:10:30.09:0,30,429	0/0:23,0:23:69.23:0,69,1014	0/0:17,0:17:51.12:0,51,718	1/1:0,29:29:81.26:1051,81,0	1/1:0,16:16:39.13:506,39,0	1/1:0,15:15:45.15:583,45,0	1/1:0,12:12:36.08:448,36,0	1/1:0,6:6:18.06:234,18,0	1/1:1,26:27:75.04:895,75,0	1/1:0,19:19:57.19:740,57,0	0/0:16,0:16:45.13:0,45,635	0/0:17,0:17:51.17:0,51,761	0/0:16,0:16:48.16:0,48,716	1/1:0,20:20:54.18:701,54,0	1/1:0,22:22:63.19:803,63,0	1/1:0,36:36:96.31:1246,96,0	1/1:0,11:11:30.10:389,30,0
chr10	81390000	.	GAGAC	G	2905.68	PASS	AB=0.833;AC=30;AF=0.536;AN=56;BaseQRankSum=8.447;DP=414;FS=41.059;HRun=0;HaplotypeScore=131.4695;InbreedingCoeff=0.7733;MQ=60.94;MQ0=3;MQRankSum=-6.959;QD=14.98;ReadPosRankSum=4.252;VQSLOD=1.6448;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:41.55:0,42,1089	0/0:7,0:7:18.06:0,18,490	0/0:37,0:26:73.55:0,74,1596	0/0:27,0:23:63.06:0,63,1473	1/1:4,18:22:5.98:68,6,0	0/0:22,0:22:54.19:0,54,1499	1/1:8,2:10:3.01:57,3,0	1/1:4,11:15:33.95:391,34,0	0/0:16,0:16:44.98:0,45,1186	1/1:14,2:16:16.74:323,17,0	1/1:8,6:14:9.39:86,9,0	0/0:15,0:15:21.13:0,21,809	0/0:15,0:15:36.44:0,36,867	0/0:16,0:16:39.13:0,39,1080	1/1:10,9:19:23.94:256,24,0	0/1:6,6:12:62.41:215,0,62	1/1:9,1:10:5.88:84,6,0	0/1:4,0:4:3.79:105,0,4	1/1:3,9:12:28.85:383,29,0	1/1:10,3:13:11.77:147,12,0	1/1:9,0:9:3.01:45,3,0	0/0:14,0:14:27.09:0,27,735	0/0:21,0:21:45.15:0,45,1207	0/0:12,0:12:30.10:0,30,830	1/1:5,4:9:12.02:132,12,0	1/1:12,0:12:29.33:344,29,0	1/1:9,5:14:30.06:378,30,0	1/1:2,1:3:8.96:106,9,0
chr10	81390002	.	GACATACACACACACATAAAC	G	7547.34	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=9.790;DP=412;FS=72.275;HRun=0;HaplotypeScore=211.5015;InbreedingCoeff=0.7506;MQ=58.43;MQ0=3;MQRankSum=-6.892;QD=41.93;ReadPosRankSum=4.646;VQSLOD=1.5833;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:43.83:0,44,2330	0/0:6,0:6:18.06:0,18,1496	0/0:36,0:25:42.61:0,43,1516	0/0:27,0:22:59.06:0,59,2465	1/1:21,0:21:6.02:306,6,0	0/0:22,0:22:57.18:0,57,2961	0/0:10,0:10:3.01:0,3,36	1/1:13,0:13:33.04:466,33,0	0/0:16,0:16:45.15:0,45,2944	1/1:16,0:16:29.10:493,29,0	1/1:7,6:13:9.50:443,10,0	0/0:15,0:15:41.76:0,42,1847	0/0:17,0:17:45.15:0,45,2325	0/0:16,0:16:39.12:0,39,1753	1/1:19,0:19:21.06:1070,21,0	0/1:12,0:12:99:902,0,237	1/1:10,0:10:4.88:219,5,0	0/1:5,0:5:93.80:115,0,94	1/1:12,0:12:29.97:537,30,0	1/1:13,0:13:12.04:506,12,0	1/1:9,0:9:2.68:70,3,0	0/0:14,0:14:30.10:0,30,1922	0/0:22,0:21:48.16:0,48,3134	0/0:13,0:13:30.10:0,30,1745	1/1:9,0:9:12.04:603,12,0	1/1:12,0:12:35.86:518,36,0	1/1:13,0:13:30.10:1041,30,0	1/1:3,0:3:9.03:258,9,0
chr10	81390006	.	TACACACACACATAAAC	T	5147.32	PASS	AB=0.833;AC=28;AF=0.500;AN=56;BaseQRankSum=10.543;DP=428;FS=74.620;HRun=0;HaplotypeScore=198.8319;InbreedingCoeff=0.7536;MQ=56.63;MQ0=3;MQRankSum=-7.689;QD=27.97;ReadPosRankSum=5.338;VQSLOD=1.4855;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:39.68:0,40,2043	0/0:7,0:7:21.07:0,21,1382	0/0:38,0:25:42.76:0,43,989	0/0:28,0:22:56.30:0,56,1566	1/1:18,3:22:6.02:220,6,0	0/0:24,0:24:63.12:0,63,2675	0/0:12,0:12:0:0,0,0	1/1:14,0:14:19:230,19,0	0/0:17,0:17:45.15:0,45,2349	1/1:14,2:16:11.76:288,12,0	1/1:6,6:12:9.50:315,10,0	0/0:16,0:16:43.24:0,43,1555	0/0:17,0:17:45.15:0,45,1828	0/0:16,0:16:38.34:0,38,1285	1/1:10,8:19:21.06:771,21,0	0/1:6,5:12:99:660,0,210	1/1:10,1:11:8.32:173,8,0	0/1:5,0:5:62.70:63,0,110	1/1:11,1:12:18.06:312,18,0	1/1:12,2:15:12.04:364,12,0	1/1:9,0:9:3.01:47,3,0	0/0:14,0:14:33.11:0,33,1781	0/0:23,0:22:54.18:0,54,2799	0/0:13,0:13:30.10:0,30,1388	1/1:4,4:8:12.03:436,12,0	1/1:12,0:12:24.07:295,24,0	1/1:9,4:14:33.11:795,33,0	1/1:2,1:3:8.96:179,9,0
chr10	81390016	.	CATAA	C	1601.49	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=9.020;DP=439;FS=51.071;HRun=0;HaplotypeScore=139.6414;InbreedingCoeff=0.4172;MQ=44.79;MQ0=6;MQRankSum=-6.481;QD=8.26;ReadPosRankSum=3.381;VQSLOD=1.2831;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:51.49:0,51,914	0/0:7,0:7:21.07:0,21,555	0/0:31,0:16:43.27:0,43,659	0/0:33,0:22:57.97:0,58,1033	1/1:20,0:20:3.89:31,4,0	0/0:24,0:24:69.01:0,69,1212	1/1:4,8:12:3.01:42,3,0	0/1:15,0:13:22.41:204,0,22	0/0:19,0:19:54.17:0,54,1125	1/1:14,0:14:11.99:113,12,0	1/1:12,0:12:3.95:31,4,0	0/0:21,0:21:52.61:0,53,771	0/0:19,0:19:16.06:0,16,481	0/0:17,0:17:40.38:0,40,531	0/1:18,0:18:5.78:86,0,6	0/1:11,0:11:63.18:101,0,63	1/1:12,0:12:8.48:99,8,0	0/1:4,0:4:7.98:86,0,8	1/1:10,0:9:18.03:215,18,0	1/1:14,0:14:6.69:95,7,0	0/1:12,0:12:37.74:38,0,39	0/0:12,0:12:33.08:0,33,712	0/0:21,0:20:54.15:0,54,1182	0/0:16,0:16:33.11:0,33,638	1/1:8,0:8:10.22:53,10,0	0/1:14,0:14:15.88:265,0,16	0/1:15,0:15:7.75:252,0,8	1/1:3,0:3:8.95:83,9,0
chr10	81390018	.	TAAAC	T	1574.22	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=10.677;DP=428;FS=33.570;HRun=0;HaplotypeScore=137.5522;InbreedingCoeff=0.8133;MQ=44.79;MQ0=8;MQRankSum=-5.875;QD=8.60;ReadPosRankSum=1.748;VQSLOD=1.3792;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:49.52:0,50,827	0/0:7,0:7:21.06:0,21,517	0/0:31,0:15:21.38:0,21,329	0/0:33,0:21:46.23:0,46,578	1/1:19,0:19:5.28:52,5,0	0/0:24,0:24:65.85:0,66,1072	1/1:11,0:11:3:29,3,0	1/1:14,0:12:17.74:113,18,0	0/0:19,0:19:54:0,54,1077	1/1:3,10:13:20.74:181,21,0	1/1:12,0:12:8.50:63,8,0	0/0:21,0:21:55.56:0,56,833	0/0:19,0:19:15.98:0,16,277	0/0:17,0:17:37.82:0,38,277	1/1:17,0:17:20.68:184,21,0	0/1:10,0:10:62.36:177,0,62	1/1:11,0:11:8.74:74,9,0	1/1:4,0:4:8.89:60,9,0	1/1:7,0:6:17.78:132,18,0	1/1:16,0:15:14.90:137,15,0	1/1:11,0:11:2.52:23,3,0	0/0:12,0:12:33:0,33,653	0/0:21,0:20:54.01:0,54,1025	0/0:16,0:16:32.87:0,33,513	1/1:8,0:8:11.92:101,12,0	1/1:11,0:11:26.43:166,26,0	1/1:15,0:15:14.56:216,15,0	1/1:4,0:4:8.95:83,9,0
chr10	81390020	.	AAC	A	734.95	PASS	AB=0.977;AC=25;AF=0.463;AN=54;BaseQRankSum=5.269;DP=438;FS=6.080;HRun=0;HaplotypeScore=132.2314;InbreedingCoeff=0.1693;MQ=44.54;MQ0=8;MQRankSum=-3.375;QD=3.08;ReadPosRankSum=3.842;VQSLOD=2.1213;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:12.60:0,13,370	0/0:7,0:7:18.02:0,18,208	0/0:32,0:15:3.01:0,3,46	0/0:32,0:21:5.98:0,6,66	0/1:20,0:20:5.16:5,0,28	0/1:23,2:25:22.96:23,0,520	1/1:12,0:12:2.74:12,3,0	0/0:11,0:9:5.96:0,6,44	0/0:20,0:20:39.13:0,39,591	1/1:13,0:13:5.68:29,6,0	0/1:12,0:12:4.93:5,0,20	0/0:22,0:22:39.10:0,39,516	1/1:3,15:18:42.08:452,42,0	1/1:10,7:17:17.85:171,18,0	0/1:17,0:17:16.40:16,0,61	0/1:10,0:10:27.30:27,0,41	1/1:12,0:12:2.58:13,3,0	./.	1/1:7,0:6:2.22:7,2,0	1/1:16,0:15:8.69:61,9,0	0/0:12,0:12:5.55:0,6,45	0/1:11,1:12:9.97:10,0,290	0/0:21,0:20:27.09:0,27,396	0/1:15,1:16:25.93:26,0,206	0/1:9,0:9:4.37:4,0,11	0/0:12,0:12:5.90:0,6,43	0/1:15,0:15:25.06:25,0,37	1/1:8,0:8:2.84:14,3,0
chr10	81390958	.	AAC	A	2363.31	PASS	AB=0.869;AC=41;AF=0.759;AN=54;BaseQRankSum=0.251;DP=483;FS=7.739;HRun=0;HaplotypeScore=68.3911;InbreedingCoeff=0.4977;MQ=64.85;MQ0=16;MQRankSum=-2.112;QD=6.83;ReadPosRankSum=2.020;VQSLOD=1.6443;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:28:0.47:1,0,0	1/1:5,0:5:3.01:33,3,0	./.	0/0:48,0:20:2.22:0,2,7	1/1:8,1:10:3.01:33,3,0	0/0:14,0:21:29.84:0,30,298	1/1:15,1:21:21.62:148,22,0	1/1:22,0:22:5.57:39,6,0	0/0:11,0:13:21.02:0,21,236	1/1:9,1:12:14.57:108,15,0	1/1:8,7:17:23.90:242,24,0	0/0:6,0:10:11.83:0,12,120	1/1:10,0:12:9.99:42,10,0	1/1:6,1:17:22.57:130,23,0	1/1:14,3:21:26.39:212,26,0	1/1:6,7:14:14.87:144,15,0	1/1:7,9:16:17.88:177,18,0	1/1:4,5:9:5.29:64,5,0	1/1:8,4:12:11.99:117,12,0	1/1:5,4:11:17.71:158,18,0	1/1:21,9:29:24.06:261,24,0	0/0:6,0:7:6.01:0,6,64	0/1:13,3:16:11.72:12,0,171	0/1:17,0:17:41.46:41,0,212	1/1:8,6:16:11.70:93,12,0	0/1:9,3:12:27.10:89,0,27	1/1:9,5:14:20.72:191,21,0	1/1:4,6:10:15.91:192,16,0
chr10	81391785	.	AAAAC	A	18838.22	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=3.402;DP=545;FS=0.630;HRun=0;HaplotypeScore=102.6192;InbreedingCoeff=0.9779;MQ=72.95;MQ0=0;MQRankSum=-6.712;QD=38.84;ReadPosRankSum=5.635;VQSLOD=5.0718;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,15:20:39.13:675,39,0	0/0:6,0:6:12.04:0,12,302	0/0:22,0:22:39.13:0,39,917	0/0:16,0:16:39.13:0,39,856	1/1:1,16:17:48.12:796,48,0	1/1:2,23:25:66.23:1139,66,0	0/0:16,0:16:42.14:0,42,1062	1/1:11,24:35:69.20:1126,69,0	1/1:4,20:24:51.17:880,51,0	1/1:5,19:24:60.19:1001,60,0	1/1:7,15:22:51.16:830,51,0	1/1:6,13:19:39.13:672,39,0	1/1:2,10:12:27.09:467,27,0	1/1:1,20:21:54.18:935,54,0	1/1:0,20:20:54.18:935,54,0	1/1:3,16:19:42.14:724,42,0	1/1:5,16:21:45.15:778,45,0	1/1:4,5:9:14.96:260,15,0	1/1:8,16:24:48.14:778,48,0	1/1:5,24:29:72.25:1240,72,0	1/1:2,13:15:33.11:571,33,0	1/1:2,15:17:42.11:724,42,0	1/1:2,16:18:45.11:740,45,0	1/1:3,14:17:33.11:568,33,0	1/1:3,16:19:42.10:695,42,0	1/1:4,23:27:69.23:1164,69,0	1/1:3,21:24:54.18:935,54,0	1/1:0,7:7:12.04:207,12,0
chr10	81391866	.	CAG	C	3447.97	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.723;DP=495;FS=0.000;HRun=0;HaplotypeScore=79.9040;InbreedingCoeff=0.9817;MQ=74.88;MQ0=0;MQRankSum=-13.022;QD=39.63;ReadPosRankSum=0.320;VQSLOD=5.5043;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.13:0,42,756	0/0:6,0:6:18.06:0,18,337	0/0:15,0:15:45.14:0,45,766	0/0:9,0:8:15.05:0,15,253	0/0:28,0:28:84.27:0,84,1535	1/1:1,12:13:36.12:529,36,0	0/0:13,0:13:33.11:0,33,618	0/0:29,0:29:87.30:0,87,1628	1/1:0,17:17:48.16:697,48,0	0/0:31,0:31:90.31:0,90,1685	0/0:31,0:31:93.31:0,93,1709	1/1:2,18:20:60.15:839,60,0	0/0:14,0:14:42.12:0,42,753	0/0:14,0:14:36.12:0,36,674	0/0:17,0:17:42.14:0,42,786	0/0:19,0:18:54.19:0,54,1011	0/0:20,0:20:60.21:0,60,1122	0/0:10,0:10:27.09:0,27,494	0/0:21,0:21:60.21:0,60,1117	0/0:30,0:30:90.29:0,90,1654	0/0:7,0:7:21.07:0,21,393	1/1:1,9:10:27.05:373,27,0	1/1:1,22:23:63.13:878,63,0	1/1:0,4:4:9.03:132,9,0	0/0:19,0:19:54.19:0,54,1011	0/0:24,0:24:72.25:0,72,1344	0/0:24,0:24:66.23:0,66,1228	0/0:12,0:12:27.09:0,27,506
chr10	81391879	.	GA	G	2067.02	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.171;DP=513;FS=2.079;HRun=9;HaplotypeScore=70.6923;InbreedingCoeff=0.9813;MQ=70.11;MQ0=0;MQRankSum=-10.758;QD=20.26;ReadPosRankSum=0.879;VQSLOD=4.2406;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:17:43.18:0,43,250	0/0:11,0:11:30.09:0,30,346	0/0:13,0:13:26.38:0,26,247	0/0:7,0:6:8.24:0,8,76	0/0:32,0:32:87.24:0,87,993	1/1:3,12:15:41.61:363,42,0	1/1:1,11:12:29.97:266,30,0	0/0:36,0:36:99:0,102,1163	1/1:3,16:19:47.94:429,48,0	0/0:29,0:29:75.22:0,75,866	0/0:27,0:27:78.23:0,78,899	1/1:2,18:20:48.01:439,48,0	0/0:14,0:14:39.12:0,39,450	0/0:17,0:17:45.13:0,45,519	0/0:14,0:15:35.94:0,36,394	0/0:17,0:16:48.14:0,48,554	0/0:24,0:24:72.20:0,72,821	0/0:9,0:9:21.06:0,21,242	0/0:22,0:22:51.14:0,51,579	0/0:28,0:28:81.23:0,81,927	0/0:6,0:6:18.05:0,18,208	1/1:1,7:8:21.01:192,21,0	1/1:4,16:20:48.02:439,48,0	1/1:1,7:8:14.98:137,15,0	0/0:21,0:21:57.13:0,57,643	0/0:22,0:22:51.14:0,51,581	0/0:26,0:26:72.20:0,72,821	0/0:18,0:18:45.13:0,45,519
chr10	81392392	.	TG	T	606.33	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.759;DP=579;FS=4.373;HRun=1;HaplotypeScore=98.0437;InbreedingCoeff=0.9834;MQ=90.31;MQ0=0;MQRankSum=-2.384;QD=31.91;ReadPosRankSum=-1.572;VQSLOD=2.9248;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.26:0,84,1312	0/0:10,0:10:30.10:0,30,480	0/0:26,0:26:51.57:0,52,1008	0/0:21,0:21:36.49:0,36,687	0/0:26,0:26:75.25:0,75,1178	0/0:27,0:27:78.27:0,78,1243	1/1:1,18:19:54.18:701,54,0	0/0:30,0:30:90.29:0,90,1396	0/0:18,0:18:54.18:0,54,863	0/0:20,0:20:60.20:0,60,958	0/0:22,0:22:66.23:0,66,1051	0/0:20,0:20:60.19:0,60,936	0/0:21,0:21:63.21:0,63,1001	0/0:6,0:6:18.06:0,18,286	0/0:20,0:20:60.19:0,60,936	0/0:19,0:19:57.19:0,57,909	0/0:16,0:16:48.16:0,48,760	0/0:12,0:12:33.11:0,33,527	0/0:21,0:21:63.20:0,63,963	0/0:31,0:31:93.30:0,93,1464	0/0:16,0:16:48.16:0,48,764	0/0:22,0:22:66.21:0,66,1028	0/0:24,0:24:72.25:0,72,1151	0/0:18,0:18:54.14:0,54,835	0/0:27,0:27:81.28:0,81,1293	0/0:23,0:23:69.24:0,69,1100	0/0:30,0:29:90.31:0,90,1436	0/0:6,0:6:18.06:0,18,288
chr10	81393095	.	C	CCT	738.59	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.174;DP=744;FS=27.187;HRun=0;HaplotypeScore=138.4251;InbreedingCoeff=0.9922;MQ=69.46;MQ0=0;MQRankSum=-0.302;QD=25.47;ReadPosRankSum=-0.706;VQSLOD=1.9094;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,17:29:22.54:831,23,0	0/0:12,0:12:21.06:0,21,250	0/0:32,0:27:40.66:0,41,504	0/0:48,0:33:46.10:0,46,456	0/0:33,0:33:78.04:0,78,894	0/0:25,0:25:69.19:0,69,831	0/0:17,0:17:34.57:0,35,360	0/0:38,0:39:84.05:0,84,990	0/0:25,0:25:62.72:0,63,714	0/0:35,0:35:90.28:0,90,1104	0/0:15,0:15:36.06:0,36,428	0/0:19,0:20:50.95:0,51,591	0/0:21,0:21:32.83:0,33,464	0/0:22,0:22:53.98:0,54,668	0/0:23,0:23:60.15:0,60,732	0/0:26,0:27:66.03:0,66,784	0/0:15,0:14:36.11:0,36,444	0/0:15,0:15:38.38:0,38,429	0/0:20,0:20:45.13:0,45,546	0/0:29,0:29:69.06:0,69,767	0/0:33,0:33:75.18:0,75,899	0/0:25,0:25:56.97:0,57,623	0/0:26,0:26:53.92:0,54,600	0/0:19,0:19:39.08:0,39,466	0/0:25,0:25:60.09:0,60,697	0/0:40,0:39:99:0,114,1392	0/0:35,0:33:60.84:0,61,970	0/0:36,0:37:96.07:0,96,1125
chr10	81393178	.	CTGTTCTTCTG	C	8339.96	PASS	AB=0.847;AC=22;AF=0.393;AN=56;BaseQRankSum=13.243;DP=1063;FS=146.505;HRun=0;HaplotypeScore=447.1320;InbreedingCoeff=-0.6475;MQ=58.66;MQ0=9;MQRankSum=-10.445;QD=10.64;ReadPosRankSum=2.832;VQSLOD=-0.7050;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,2:41:83.84:0,84,2428	0/0:11,0:11:33.11:0,33,1607	0/0:53,0:34:82.67:0,83,2463	0/0:92,0:43:70.80:0,71,2301	0/1:38,5:43:99:154,0,2892	0/1:25,5:28:99:215,0,1653	0/0:32,7:39:21.05:0,21,2140	0/1:47,15:58:99:905,0,2825	0/1:30,7:37:99:469,0,2311	0/1:44,4:48:99:697,0,2983	0/1:18,7:25:45.47:45,0,1636	0/1:25,7:31:99:126,0,2073	0/1:41,7:47:99:546,0,2112	0/1:27,17:44:94.39:94,0,1619	0/1:30,11:41:99:655,0,1637	0/1:30,7:37:99:569,0,1852	0/1:24,3:27:51.10:51,0,1738	0/1:17,2:19:99:164,0,1297	0/1:20,6:26:99:651,0,1376	0/1:24,7:31:99:425,0,1655	0/0:37,3:41:91.55:0,92,2908	0/1:18,7:23:99:174,0,1044	0/1:23,5:28:99:221,0,1830	0/1:27,3:30:87.16:87,0,1449	0/1:27,8:35:99:501,0,2363	0/1:37,9:46:99:1031,0,2682	0/1:41,4:44:99:450,0,2943	0/1:23,1:24:99:109,0,2094
chr10	81393327	.	GTC	G	10174.91	PASS	AB=0.740;AC=21;AF=0.375;AN=56;BaseQRankSum=-10.513;DP=1431;FS=1.568;HRun=0;HaplotypeScore=480.0180;InbreedingCoeff=0.0438;MQ=50.49;MQ0=18;MQRankSum=2.367;QD=12.21;ReadPosRankSum=2.633;VQSLOD=4.1386;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,2:61:59.76:0,60,543	0/0:15,1:16:10.67:0,11,705	0/0:49,0:22:41.68:0,42,535	0/0:77,1:36:52.21:0,52,708	1/1:31,38:69:51.17:1147,51,0	0/0:60,3:61:47.79:0,48,614	0/1:28,13:41:40.33:363,0,40	0/1:44,11:45:99:483,0,156	0/0:55,2:56:9.12:0,9,484	0/1:33,37:69:99:1082,0,199	1/1:17,19:36:44.69:560,45,0	0/0:59,3:62:47.21:0,47,733	0/1:49,2:50:21.15:21,0,567	0/0:38,2:39:53.91:0,54,524	0/1:19,21:40:57.09:365,0,57	0/1:31,31:62:99:935,0,102	1/1:10,24:33:20.18:495,20,0	0/1:13,13:26:0.18:440,0,0	0/1:33,15:45:61.17:592,0,61	0/1:43,13:56:99:551,0,112	1/1:15,15:30:34.51:435,35,0	0/0:51,5:56:83.97:0,84,798	0/0:57,7:63:39.10:0,39,718	0/0:52,0:50:65.15:0,65,646	0/1:40,18:59:63.32:605,0,63	0/1:32,40:72:99:1048,0,213	0/1:38,22:60:63.91:770,0,64	0/1:14,9:23:99:284,0,183
chr10	81393341	.	C	CTG	8572.40	PASS	AB=0.627;AC=19;AF=0.339;AN=56;BaseQRankSum=-6.818;DP=1307;FS=11.124;HRun=0;HaplotypeScore=515.0358;InbreedingCoeff=0.9250;MQ=51.56;MQ0=13;MQRankSum=-3.009;QD=16.68;ReadPosRankSum=0.484;VQSLOD=4.1659;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:55,0:56:61.71:494,62,0	0/0:20,0:20:60.11:0,60,735	0/0:42,0:25:36.35:0,36,573	0/0:55,0:37:78.71:0,79,827	0/0:64,0:64:99:0,108,806	1/1:33,22:54:19.98:946,20,0	1/1:33,0:33:49.49:295,49,0	0/0:57,0:49:99:0,112,949	1/1:27,22:50:43.46:1011,43,0	0/0:64,0:66:99:0,114,1012	0/0:28,0:30:48.22:0,48,378	1/1:38,19:57:50.22:1071,50,0	0/1:19,28:46:9.88:854,0,10	1/1:19,24:42:21.71:623,22,0	0/0:39,0:40:24:0,24,250	0/0:58,0:61:80.17:0,80,680	0/0:31,0:30:48.75:0,49,370	0/0:24,0:24:48.91:0,49,360	0/0:42,0:40:75.41:0,75,641	0/0:47,0:50:27.50:0,28,397	0/0:28,0:29:38.28:0,38,279	1/1:21,34:59:59.46:1214,59,0	1/1:39,15:54:53.49:1000,53,0	1/1:14,40:55:61.96:1065,62,0	0/0:44,0:44:18.50:0,18,406	0/0:61,0:63:99:0,113,921	0/0:45,0:48:63.39:0,63,526	0/0:25,0:25:48.90:0,49,461
chr10	81393414	.	GTGTT	G	5469.14	PASS	AB=0.988;AC=23;AF=0.411;AN=56;BaseQRankSum=2.936;DP=1004;FS=37.404;HRun=0;HaplotypeScore=346.1602;InbreedingCoeff=0.2818;MQ=58.49;MQ0=21;MQRankSum=-2.616;QD=11.99;ReadPosRankSum=6.062;VQSLOD=3.0744;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:50.86:0,51,827	0/0:13,0:12:27.07:0,27,599	0/0:79,0:32:42.32:0,42,1098	0/0:117,0:45:25.46:0,25,785	1/1:30,0:30:18.07:457,18,0	0/0:36,0:36:81.32:0,81,1522	1/1:23,0:22:3.14:119,3,0	1/1:30,1:27:54.65:788,55,0	0/0:40,0:40:95.76:0,96,1862	0/1:37,1:37:49.01:552,0,49	0/1:18,0:18:7.12:121,0,7	0/0:32,0:32:68.80:0,69,1438	0/0:36,0:35:60.08:0,60,1297	0/0:27,0:27:45.62:0,46,1074	0/1:32,1:33:18.27:200,0,18	0/1:25,0:25:33.23:277,0,33	1/1:31,0:31:9.04:432,9,0	0/1:10,0:10:6.07:67,0,6	0/1:24,0:23:19.91:278,0,20	1/1:30,0:30:32.44:543,32,0	1/1:27,0:25:4.96:109,5,0	0/0:37,0:36:47.30:0,47,985	0/0:34,0:34:77.48:0,77,1690	0/0:58,0:57:91.29:0,91,1973	0/1:39,0:39:55.57:232,0,56	0/1:48,3:50:79.03:795,0,79	0/1:34,0:34:42.24:453,0,42	1/1:11,0:11:3.01:45,3,0
chr10	81393416	.	GTT	G	6595.37	PASS	AB=0.779;AC=31;AF=0.554;AN=56;BaseQRankSum=5.763;DP=887;FS=7.844;HRun=3;HaplotypeScore=255.3893;InbreedingCoeff=0.7784;MQ=60.75;MQ0=19;MQRankSum=-4.863;QD=13.38;ReadPosRankSum=1.447;VQSLOD=1.1242;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:33.95:0,34,607	0/0:11,0:10:27.08:0,27,459	0/0:71,0:32:28.31:0,28,860	0/1:106,0:42:1.57:2,0,596	1/1:13,16:29:23.85:461,24,0	0/0:33,0:33:13.19:0,13,992	1/1:20,0:18:8.69:101,9,0	1/1:13,18:27:62.59:788,63,0	0/0:35,0:35:50.45:0,50,1252	1/1:16,15:30:53.36:732,53,0	0/1:8,8:16:1.31:123,0,1	0/0:26,0:26:50.33:0,50,983	0/0:32,0:32:40.56:0,41,880	0/0:26,0:26:25.28:0,25,745	1/1:9,16:25:15.59:245,16,0	1/1:7,14:21:9.16:300,9,0	1/1:12,15:27:22.25:474,22,0	1/1:8,2:10:10.18:156,10,0	1/1:10,7:17:34.07:366,34,0	1/1:7,19:26:37.02:582,37,0	1/1:14,11:23:5.33:108,5,0	0/0:35,0:34:20.95:0,21,757	0/0:34,0:34:48.93:0,49,1174	0/0:57,0:57:26.20:0,26,1314	0/1:17,13:30:12.21:294,0,12	1/1:19,23:42:85.85:1140,86,0	1/1:12,20:32:49.94:679,50,0	1/1:0,1:1:3.01:45,3,0
chr10	81393424	.	G	GTGTCTC	6424.52	PASS	AB=0.968;AC=29;AF=0.518;AN=56;BaseQRankSum=8.586;DP=855;FS=1.118;HRun=0;HaplotypeScore=298.3887;InbreedingCoeff=0.6225;MQ=54.85;MQ0=17;MQRankSum=-6.043;QD=14.98;ReadPosRankSum=-1.376;VQSLOD=3.7396;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:28:99:266,0,517	0/0:11,0:10:27.08:0,27,554	0/0:59,0:22:21.02:0,21,860	0/0:86,0:29:46.27:0,46,797	1/1:29,2:31:29.64:224,30,0	0/0:32,0:32:70.51:0,71,1044	0/1:23,0:21:66.28:168,0,66	1/1:35,0:30:44.56:715,45,0	0/0:36,0:36:72.81:0,73,874	1/1:29,2:32:74.23:846,74,0	1/1:18,1:19:9.01:111,9,0	0/0:24,0:24:54.29:0,54,773	0/0:32,0:31:54.97:0,55,745	0/0:26,0:26:46.02:0,46,758	1/1:23,1:24:23.83:254,24,0	1/1:18,4:22:27.75:381,28,0	0/1:25,0:25:70.33:288,0,70	0/1:14,1:15:99:196,0,116	0/1:16,2:18:4.84:459,0,5	1/1:28,0:28:36.73:313,37,0	1/1:22,0:20:6.90:46,7,0	0/0:32,0:31:45.99:0,46,743	0/0:36,0:35:79.44:0,79,1015	0/0:51,0:51:57.40:0,57,1112	1/1:21,5:28:23.74:224,24,0	1/1:34,2:40:91.22:1164,91,0	1/1:30,2:34:65.40:732,65,0	1/1:3,0:3:5.35:36,5,0
chr10	81393426	.	G	GTCTC	5124.62	PASS	AB=0.990;AC=31;AF=0.554;AN=56;BaseQRankSum=11.409;DP=852;FS=11.951;HRun=0;HaplotypeScore=279.2166;InbreedingCoeff=0.3341;MQ=53.42;MQ0=16;MQRankSum=-5.268;QD=9.82;ReadPosRankSum=1.673;VQSLOD=2.7011;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:28:99:132,0,542	0/0:11,0:10:27.09:0,27,510	0/0:56,0:22:34.16:0,34,793	0/0:84,0:27:47.21:0,47,731	1/1:29,2:31:29.42:225,29,0	0/1:32,0:32:7.11:7,0,655	0/1:21,0:20:47.83:180,0,48	1/1:36,0:31:23.49:527,23,0	0/1:37,0:37:8.93:9,0,487	1/1:30,2:31:52.92:650,53,0	1/1:18,0:19:8.98:87,9,0	0/1:25,0:25:17.37:17,0,507	0/0:32,0:31:6.22:0,6,503	0/0:26,0:26:33.01:0,33,556	1/1:23,0:23:21.21:142,21,0	1/1:24,0:24:26.18:273,26,0	0/1:24,0:24:53.83:248,0,54	0/1:16,0:16:86.68:87,0,139	0/1:20,1:21:33.65:449,0,34	1/1:26,1:27:36.71:290,37,0	1/1:20,0:18:6.90:45,7,0	0/0:33,0:32:35.79:0,36,574	0/0:36,0:35:18:0,18,610	0/0:51,0:51:13.80:0,14,671	1/1:28,0:28:23.50:165,24,0	1/1:39,0:39:83.85:883,84,0	1/1:32,1:33:65.58:690,66,0	0/1:4,0:4:17.31:17,0,30
chr10	81393428	.	G	GTGTC	7493.63	PASS	AB=0.994;AC=20;AF=0.357;AN=56;BaseQRankSum=-9.351;DP=840;FS=50.445;HRun=0;HaplotypeScore=264.0582;InbreedingCoeff=0.1922;MQ=52.89;MQ0=16;MQRankSum=7.182;QD=16.22;ReadPosRankSum=3.723;VQSLOD=2.5796;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:28:65.91:66,0,154	0/0:11,0:10:20.99:0,21,249	0/0:54,0:21:26.73:0,27,211	0/0:78,0:25:22.38:0,22,265	0/0:31,0:31:29.70:0,30,221	1/1:29,5:34:61.97:1060,62,0	0/1:21,0:19:25.33:25,0,55	0/0:36,0:30:61.79:0,62,380	1/1:25,9:35:81.05:1379,81,0	0/1:31,0:30:57.13:57,0,335	0/0:16,0:16:5.98:0,6,48	1/1:20,5:25:48:876,48,0	0/1:33,0:32:39.11:555,0,39	0/1:26,0:26:47.89:421,0,48	0/0:23,0:23:21.62:0,22,157	0/0:25,0:25:4.22:0,4,166	0/0:23,0:23:31.58:0,32,261	0/1:16,0:16:3.28:3,0,104	0/1:21,0:21:13.60:14,0,236	0/0:26,0:26:32.84:0,33,257	0/0:19,0:17:4.14:0,4,43	0/1:31,0:32:99:269,0,122	1/1:25,10:34:75.09:1217,75,0	1/1:38,9:49:96:1471,96,0	0/0:30,0:30:16.31:0,16,145	0/1:40,0:40:36.78:37,0,494	0/1:34,0:34:43.15:43,0,235	0/0:4,0:4:11.89:0,12,84
chr10	81393432	.	C	CTGTG	6754.20	PASS	AB=1.000;AC=44;AF=0.846;AN=52;BaseQRankSum=-0.237;DP=833;FS=4.948;HRun=0;HaplotypeScore=265.2857;InbreedingCoeff=0.3318;MQ=51.54;MQ0=15;MQRankSum=0.858;QD=8.89;ReadPosRankSum=3.573;VQSLOD=3.7366;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:31:17.94:175,18,0	0/0:11,0:10:14.96:0,15,180	./.	0/1:70,0:23:0:0,0,0	0/1:32,0:32:0.27:0,0,0	0/1:36,0:36:7.39:421,0,7	1/1:22,0:20:7.34:89,7,0	1/1:39,0:33:13.91:103,14,0	1/1:35,0:36:3.36:672,3,0	1/1:31,0:30:22.92:270,23,0	./.	1/1:23,0:23:3.35:432,3,0	1/1:24,8:32:56.34:998,56,0	1/1:20,4:24:40.24:777,40,0	1/1:24,0:24:8.24:52,8,0	1/1:26,0:26:14.07:114,14,0	0/1:23,0:23:10.06:10,0,18	0/1:16,0:16:8.83:59,0,9	1/1:22,0:22:13.11:148,13,0	0/1:27,0:27:0:0,0,0	1/1:21,0:19:0.47:1,0,0	1/1:29,3:31:23.74:474,24,0	1/1:34,0:34:44.92:662,45,0	1/1:47,0:47:27.66:732,28,0	1/1:31,0:31:5.74:52,6,0	1/1:40,0:40:17.82:264,18,0	1/1:34,0:34:23.42:243,23,0	1/1:4,0:4:2.03:5,2,0
chr10	81393434	.	G	GTC	3221.30	PASS	AB=0.939;AC=9;AF=0.161;AN=56;BaseQRankSum=-3.787;DP=835;FS=25.228;HRun=0;HaplotypeScore=255.6399;InbreedingCoeff=0.1931;MQ=50.08;MQ0=15;MQRankSum=6.495;QD=13.09;ReadPosRankSum=8.776;VQSLOD=1.7154;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:20.92:0,21,190	0/0:11,0:10:20.87:0,21,245	0/0:40,0:12:26.73:0,27,211	0/0:66,0:20:23.33:0,23,266	0/0:33,0:33:25.31:0,25,216	0/1:34,2:36:42.25:599,0,42	0/0:22,0:20:22.26:0,22,143	0/0:38,0:32:81.38:0,81,547	0/1:36,1:37:99:608,0,142	0/0:33,0:31:57.85:0,58,450	0/0:16,0:16:2.04:0,2,42	0/1:17,7:24:38.53:629,0,39	0/1:33,0:32:45.81:46,0,147	0/0:24,0:24:11.72:0,12,155	0/0:24,0:24:24.78:0,25,180	0/0:26,0:26:19.96:0,20,230	0/0:23,0:23:39.93:0,40,288	0/0:16,0:16:21.34:0,21,174	0/0:24,0:24:57.41:0,57,390	0/0:27,0:27:32.85:0,33,258	0/0:21,0:19:7.10:0,7,68	0/1:33,0:32:10.71:11,0,133	1/1:35,1:35:41.34:633,41,0	1/1:44,3:47:1.32:836,1,0	0/0:31,0:31:5.16:0,5,149	0/0:42,0:42:83.37:0,83,638	0/0:35,0:35:10.63:0,11,247	0/0:5,0:5:11.91:0,12,87
chr10	81393799	.	ACACTCT	A	1553.65	PASS	AB=0.719;AC=3;AF=0.054;AN=56;BaseQRankSum=6.638;DP=547;FS=8.258;HRun=0;HaplotypeScore=116.8172;InbreedingCoeff=-0.0584;MQ=65.17;MQ0=0;MQRankSum=-7.756;QD=23.19;ReadPosRankSum=1.272;VQSLOD=3.0180;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:33.11:0,33,1231	0/0:7,0:7:21.07:0,21,771	0/0:6,0:6:18.06:0,18,596	0/0:4,0:4:12.04:0,12,407	0/0:39,0:39:99:0,111,3977	0/0:14,0:14:42.12:0,42,1469	0/0:11,0:11:33.11:0,33,1231	0/0:30,0:30:90.30:0,90,3234	0/0:16,0:16:48.16:0,48,1790	0/0:32,0:32:93.32:0,93,3401	0/0:23,0:23:66.23:0,66,2429	0/0:18,0:18:54.17:0,54,1918	0/1:13,10:23:99:627,0,727	0/1:11,8:19:99:557,0,613	0/0:26,0:25:78.27:0,78,2906	0/0:19,0:19:57.20:0,57,2122	0/0:22,0:22:66.23:0,66,2416	0/0:9,0:9:27.09:0,27,988	0/0:16,0:16:48.16:0,48,1734	0/0:32,0:32:96.28:0,96,3285	0/0:9,0:9:24.08:0,24,890	0/1:17,8:25:99:470,0,930	0/0:16,0:16:48.16:0,48,1722	0/0:9,0:9:27.09:0,27,1007	0/0:26,0:26:78.25:0,78,2810	0/0:26,0:26:78.25:0,78,2726	0/0:37,0:36:99:0,111,4016	0/0:22,0:22:66.23:0,66,2450
chr10	81397189	.	C	CT	588.84	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.763;DP=557;FS=0.728;HRun=9;HaplotypeScore=67.4524;InbreedingCoeff=0.8770;MQ=71.33;MQ0=0;MQRankSum=-1.010;QD=23.55;ReadPosRankSum=-1.011;VQSLOD=4.0864;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,10:13:10.04:339,10,0	0/0:10,0:10:26.99:0,27,234	0/0:12,0:12:15.04:0,15,147	0/0:6,0:6:4.33:0,4,26	0/0:27,1:28:35.79:0,36,540	0/0:33,0:32:77.96:0,78,677	1/1:0,12:12:33.09:365,33,0	0/0:38,0:38:51.25:0,51,665	0/0:14,0:14:36.46:0,36,313	0/0:31,0:33:83:0,83,709	0/0:32,0:32:83.98:0,84,729	0/0:19,0:19:56.99:0,57,495	0/0:25,0:25:59.98:0,60,521	0/0:14,0:14:32.97:0,33,286	0/0:22,0:22:56.98:0,57,495	0/0:20,0:20:56.97:0,57,491	0/0:12,0:12:32.99:0,33,286	0/0:15,1:16:11.81:0,12,331	0/0:29,0:29:71.98:0,72,625	0/0:28,0:28:65.97:0,66,573	0/0:10,0:10:29.98:0,30,256	0/0:13,0:13:35.99:0,36,313	0/0:24,0:24:65.98:0,66,573	0/0:10,0:10:26.98:0,27,230	0/0:19,0:19:50.98:0,51,440	0/0:27,0:27:69.86:0,70,598	0/0:29,1:30:47.76:0,48,636	0/0:7,0:7:14.97:0,15,130
chr10	81397413	.	AT	A	10645.30	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=14.658;DP=561;FS=1.558;HRun=7;HaplotypeScore=60.1800;InbreedingCoeff=0.9617;MQ=66.24;MQ0=0;MQRankSum=-0.384;QD=27.30;ReadPosRankSum=-0.694;VQSLOD=5.2689;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:48.11:490,48,0	0/0:9,0:9:27.09:0,27,339	0/0:7,0:7:9.01:0,9,92	0/0:3,0:2:3:0,3,29	1/1:0,29:29:78.17:794,78,0	0/0:28,0:28:72.23:0,72,906	0/0:4,0:4:12.04:0,12,151	1/1:8,33:41:99:995,99,0	0/0:9,0:9:21.07:0,21,264	1/1:1,34:35:99:1034,102,0	1/1:2,21:23:60.13:612,60,0	0/0:20,0:20:57.17:0,57,705	0/0:22,0:22:63.20:0,63,789	0/0:17,0:17:45.13:0,45,553	1/1:0,20:20:57.13:582,57,0	1/1:0,13:13:36.06:367,36,0	1/1:0,15:15:36.08:367,36,0	1/1:0,21:21:54.12:550,54,0	1/1:2,19:21:57.11:574,57,0	1/1:2,42:44:99:1159,114,0	1/1:1,19:20:57.13:582,57,0	0/0:15,0:15:45.14:0,45,566	0/0:27,0:27:75.24:0,75,943	0/0:10,0:10:30.10:0,30,377	1/1:1,24:25:63.14:643,63,0	1/1:0,22:22:66.15:673,66,0	1/1:3,34:37:99:1010,99,0	1/1:0,7:7:21.05:214,21,0
chr10	81399393	.	TAAAC	T	3131.59	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-6.577;DP=435;FS=9.269;HRun=0;HaplotypeScore=94.2003;InbreedingCoeff=0.9634;MQ=72.06;MQ0=1;MQRankSum=-1.507;QD=44.74;ReadPosRankSum=2.014;VQSLOD=4.0816;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.18:0,54,1377	0/0:10,0:10:30.10:0,30,810	0/0:8,0:8:24.08:0,24,544	0/0:6,0:6:14.07:0,14,363	0/0:28,0:28:81.26:0,81,2082	1/1:0,16:16:42.14:797,42,0	0/0:8,0:8:24.08:0,24,648	0/0:28,0:28:81.27:0,81,2065	1/1:1,15:16:39.13:740,39,0	0/0:23,0:23:60.21:0,60,1582	0/0:27,0:27:78.23:0,78,1881	1/1:0,12:12:33.11:626,33,0	0/0:17,0:17:48.16:0,48,1295	0/0:11,0:11:33.11:0,33,891	0/0:13,0:13:39.13:0,39,1037	0/0:10,0:10:30.10:0,30,787	0/0:23,0:23:69.24:0,69,1774	0/0:20,0:20:54.18:0,54,1348	0/0:12,0:12:36.12:0,36,959	0/0:28,0:28:81.28:0,81,2152	0/0:5,0:5:15.05:0,15,399	0/0:6,0:6:18.06:0,18,486	1/1:4,18:22:54.19:1025,54,0	1/1:1,3:3:6.02:114,6,0	0/0:14,0:14:42.14:0,42,1119	0/0:20,0:20:57.20:0,57,1497	0/0:20,0:20:57.20:0,57,1515	0/0:8,0:8:24.08:0,24,601
chr10	81399734	.	TAGAG	T	293.87	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.851;DP=525;FS=5.855;HRun=0;HaplotypeScore=134.2970;InbreedingCoeff=0.9557;MQ=91.79;MQ0=0;MQRankSum=-4.069;QD=20.99;ReadPosRankSum=-0.352;VQSLOD=3.2167;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,10:14:21.07:386,21,0	0/0:15,0:15:45.15:0,45,1174	0/0:28,0:28:84.26:0,84,2082	0/0:15,0:15:39.13:0,39,988	0/0:25,0:25:75.26:0,75,1969	0/0:18,0:18:51.15:0,51,1291	0/0:16,0:16:42.14:0,42,1102	0/0:30,0:30:78.25:0,78,1903	0/0:20,0:20:57.20:0,57,1505	0/0:23,0:23:57.20:0,57,1504	0/0:22,0:22:63.22:0,63,1658	0/0:22,0:22:66.20:0,66,1635	0/0:23,0:23:66.23:0,66,1732	0/0:21,0:21:57.20:0,57,1474	0/0:17,0:17:39.13:0,39,1030	0/0:20,0:20:57.20:0,57,1506	0/0:14,0:14:42.14:0,42,1062	0/0:12,0:12:18.06:0,18,475	0/0:14,0:14:39.13:0,39,1028	0/0:33,0:33:93.32:0,93,2456	0/0:9,0:9:27.09:0,27,707	0/0:15,0:15:45.15:0,45,1188	0/0:18,0:18:45.14:0,45,1132	0/0:9,0:9:24.08:0,24,634	0/0:19,0:19:48.16:0,48,1268	0/0:24,0:24:66.23:0,66,1744	0/0:24,0:24:72.25:0,72,1868	0/0:5,0:5:12.04:0,12,317
chr10	81399974	.	G	GA	8125.30	PASS	AB=0.768;AC=30;AF=0.536;AN=56;BaseQRankSum=12.100;DP=590;FS=0.000;HRun=9;HaplotypeScore=84.7565;InbreedingCoeff=0.8083;MQ=75.66;MQ0=0;MQRankSum=-0.872;QD=22.32;ReadPosRankSum=-0.491;VQSLOD=5.1071;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:38.93:0,39,333	0/0:12,0:12:35.99:0,36,313	0/1:20,0:19:8.46:8,0,111	0/0:19,1:18:23.84:0,24,271	1/1:5,19:24:14.07:603,14,0	0/0:26,2:28:44.78:0,45,614	0/0:14,0:14:11.69:0,12,106	1/1:9,21:30:60.76:672,61,0	0/0:18,0:18:50.99:0,51,442	1/1:3,19:22:31.09:563,31,0	1/1:3,29:32:58.17:870,58,0	0/0:22,0:22:59.98:0,60,521	0/0:17,0:17:38.98:0,39,338	0/0:17,0:17:50.99:0,51,442	0/1:5,13:18:14.66:297,0,15	1/1:4,23:28:33.94:586,34,0	1/1:6,10:16:1.02:237,1,0	1/1:7,11:18:30.08:332,30,0	1/1:2,22:25:68.99:733,69,0	1/1:1,19:20:60.15:656,60,0	1/1:1,8:9:18.05:199,18,0	0/0:13,1:14:5.81:0,6,279	0/0:27,0:27:64.38:0,64,660	0/0:17,0:17:47.99:0,48,417	1/1:3,28:31:75.20:830,75,0	1/1:8,23:32:72.01:768,72,0	1/1:8,25:33:37.11:638,37,0	1/1:1,4:5:12.03:133,12,0
chr10	81400519	.	C	CAGAGAGAG	636.64	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=0.485;DP=675;FS=10.954;HRun=0;HaplotypeScore=182.1404;InbreedingCoeff=0.4402;MQ=65.51;MQ0=30;MQRankSum=-3.934;QD=3.93;ReadPosRankSum=-3.293;VQSLOD=1.3655;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:15:5.95:107,6,0	0/0:10,0:9:17.08:0,17,419	0/0:37,0:23:54.40:0,54,1509	0/0:55,0:37:87.72:0,88,2666	0/0:22,0:21:2.99:0,3,24	1/1:16,0:16:3.01:126,3,0	0/0:26,0:24:50.76:0,51,1071	0/0:22,0:19:13.01:0,13,301	1/1:17,1:17:8.98:246,9,0	0/0:30,0:28:42.48:0,42,638	0/0:19,0:19:40.16:0,40,381	1/1:16,0:16:5.07:133,5,0	0/0:14,0:14:27.56:0,28,524	0/0:23,0:23:4.84:0,5,34	0/0:25,0:25:3.38:0,3,24	0/1:36,0:35:22.05:22,0,43	0/0:31,0:30:2.76:0,3,67	0/0:23,0:23:23.66:0,24,480	0/1:13,0:13:43.66:44,0,142	0/0:21,0:20:32.25:0,32,368	0/0:58,0:54:22.22:0,22,1071	0/0:23,0:22:57:0,57,1154	0/0:4,15:20:0:0,0,1	1/1:16,0:15:2.82:74,3,0	0/1:29,0:29:34.79:35,0,441	0/0:22,0:21:42.36:0,42,486	0/0:20,0:20:25.78:0,26,465	0/0:11,0:9:26.73:0,27,294
chr10	81400521	.	C	CAG	4725.19	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=4.962;DP=676;FS=16.412;HRun=0;HaplotypeScore=109.6506;InbreedingCoeff=0.7324;MQ=69.03;MQ0=27;MQRankSum=-2.648;QD=10.64;ReadPosRankSum=0.756;VQSLOD=3.5907;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:15:5.49:24,5,0	0/0:9,0:8:16.51:0,17,123	0/0:40,0:26:57.34:0,57,597	0/0:57,0:39:84.72:0,85,934	0/0:7,15:22:2.07:0,2,7	1/1:3,0:16:5.39:41,5,0	0/0:25,0:23:43.91:0,44,287	1/1:22,0:19:39.81:330,40,0	1/1:8,0:17:5.28:39,5,0	1/1:4,26:28:64.51:561,65,0	1/1:19,0:19:32.10:298,32,0	1/1:5,1:19:2.05:11,2,0	0/0:14,0:14:14.70:0,15,129	1/1:25,0:25:2.99:24,3,0	0/0:26,0:26:0.39:0,0,1	1/1:6,31:37:4.33:114,4,0	1/1:6,28:33:7.26:122,7,0	1/1:24,0:24:28.10:334,28,0	1/1:12,0:12:22.15:186,22,0	1/1:20,1:20:31.74:286,32,0	1/1:53,0:50:99:904,110,0	0/0:23,0:22:13.60:0,14,247	1/1:21,0:20:3.22:12,3,0	0/0:15,0:14:0:0,0,0	1/1:26,0:26:53.46:457,53,0	1/1:18,0:18:41.91:371,42,0	1/1:20,0:20:43.17:437,43,0	1/1:11,0:9:18.97:173,19,0
chr10	81400523	.	C	CAGAG	9629.57	PASS	AB=0.521;AC=49;AF=0.875;AN=56;BaseQRankSum=1.951;DP=678;FS=4.245;HRun=0;HaplotypeScore=128.9816;InbreedingCoeff=0.6623;MQ=68.97;MQ0=21;MQRankSum=-4.508;QD=16.86;ReadPosRankSum=1.354;VQSLOD=4.7027;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:20:6:63,6,0	0/0:10,0:9:16.61:0,17,239	0/0:40,0:26:62.37:0,62,1134	0/0:57,0:39:96:0,96,1692	1/1:22,0:22:0.95:3,1,0	1/1:18,0:18:9.43:124,9,0	1/1:23,0:23:9.58:60,10,0	1/1:22,0:19:42.11:681,42,0	1/1:17,0:17:11.56:165,12,0	1/1:30,0:29:69.17:1094,69,0	1/1:16,0:16:33.11:563,33,0	1/1:15,0:15:11.97:157,12,0	1/1:14,0:14:9.80:72,10,0	1/1:3,0:25:2.82:60,3,0	0/1:2,21:25:0:0,0,0	1/1:37,0:36:11.52:130,12,0	1/1:32,0:31:14.52:162,15,0	1/1:24,0:24:52.88:685,53,0	1/1:14,0:14:30:390,30,0	1/1:21,0:20:37.05:559,37,0	1/1:51,0:49:99:1669,108,0	1/1:20,0:20:14.27:140,14,0	1/1:27,0:26:5.50:31,6,0	1/1:7,0:18:2.75:57,3,0	1/1:26,0:26:51.39:780,51,0	1/1:19,0:19:34.92:737,35,0	1/1:20,0:20:51.11:957,51,0	1/1:11,0:9:2.68:291,3,0
chr10	81404216	.	A	ATCTCTC	21251.60	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-3.856;DP=723;FS=6.217;HRun=0;HaplotypeScore=174.3368;InbreedingCoeff=0.7557;MQ=75.00;MQ0=10;MQRankSum=-4.425;QD=33.68;ReadPosRankSum=1.155;VQSLOD=4.3011;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:36.24:0,36,1363	0/0:11,0:11:27.09:0,27,579	0/0:49,0:40:27.48:0,27,679	0/1:46,0:30:25.57:26,0,469	1/1:12,20:35:38.48:1297,38,0	1/1:9,0:34:50.51:659,51,0	1/1:7,0:19:25.79:346,26,0	1/1:32,5:41:51.17:1422,51,0	1/1:2,0:17:39.13:505,39,0	1/1:16,14:32:69.21:2073,69,0	1/1:9,14:24:27.09:900,27,0	1/1:4,0:28:53.52:697,54,0	1/1:7,0:23:45.15:581,45,0	1/1:7,0:26:54.17:694,54,0	1/1:11,12:27:35.97:1139,36,0	1/1:8,21:30:66.23:2130,66,0	1/1:9,5:13:15.05:500,15,0	1/1:5,3:12:15.05:378,15,0	1/1:16,7:24:46.61:1253,47,0	1/1:8,14:26:26.08:837,26,0	1/1:7,3:11:2.98:100,3,0	1/1:6,0:28:34.81:462,35,0	1/1:10,0:27:34.64:463,35,0	1/1:10,0:30:45.61:575,46,0	1/1:6,11:19:33.11:1039,33,0	1/1:10,15:25:57.18:1790,57,0	1/1:5,18:22:39.13:1302,39,0	1/1:3,0:3:6.02:84,6,0
chr10	81404218	.	C	CTG	857.91	PASS	AB=0.997;AC=27;AF=0.482;AN=56;BaseQRankSum=14.234;DP=728;FS=7.806;HRun=0;HaplotypeScore=201.8657;InbreedingCoeff=-0.5914;MQ=74.39;MQ0=10;MQRankSum=-8.480;QD=1.32;ReadPosRankSum=11.825;VQSLOD=0.0670;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:78.21:0,78,1122	0/0:11,0:11:30.09:0,30,437	0/1:49,2:40:2.14:2,0,843	0/1:46,2:32:14.33:14,0,617	0/1:36,0:36:20.60:118,0,21	0/1:36,0:34:30.02:30,0,108	0/1:20,0:20:39.68:40,0,80	0/0:38,0:38:24.29:0,24,429	0/1:18,0:18:21.90:22,0,32	0/1:34,0:33:25.60:26,0,211	0/1:25,0:25:35.38:68,0,35	0/1:29,0:28:24.10:50,0,24	0/1:23,0:23:7.19:7,0,85	0/1:26,0:26:21:21,0,70	0/1:28,0:28:54.66:55,0,82	0/1:32,0:32:29:107,0,29	0/1:14,0:13:24.17:24,0,46	0/1:13,0:13:1.26:1,0,83	0/1:25,0:24:22.24:22,0,203	1/1:24,0:24:8.98:93,9,0	0/1:11,0:11:3.99:4,0,40	0/1:29,0:28:55.05:60,0,55	0/1:24,0:24:21.06:21,0,77	0/1:30,0:30:19.04:19,0,115	1/1:20,0:20:2.23:60,2,0	0/1:26,0:25:54.38:54,0,93	0/1:24,0:23:45.84:66,0,46	0/1:3,0:3:11.12:27,0,11
chr10	81405092	.	CT	C	11968.36	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=9.711;DP=673;FS=6.668;HRun=8;HaplotypeScore=69.5005;InbreedingCoeff=0.9970;MQ=82.64;MQ0=3;MQRankSum=-3.804;QD=23.79;ReadPosRankSum=1.703;VQSLOD=5.7247;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:63.10:608,63,0	0/0:12,0:12:30.08:0,30,350	0/0:26,1:27:17.53:0,18,660	0/0:16,0:16:36.06:0,36,409	1/1:4,27:30:72.05:686,72,0	0/0:33,0:33:96.28:0,96,1144	1/1:1,0:15:18.33:53,18,0	1/1:3,27:29:74.99:723,75,0	0/0:16,0:16:48.15:0,48,580	1/1:4,24:28:75.09:710,75,0	1/1:0,17:17:42.06:406,42,0	0/0:30,0:30:75.22:0,75,892	1/1:2,19:21:57.09:550,57,0	1/1:3,25:28:72.11:695,72,0	1/1:4,29:33:87.14:840,87,0	1/1:6,34:38:96.15:927,96,0	1/1:1,25:26:63.10:608,63,0	1/1:2,12:14:33.05:319,33,0	1/1:8,10:18:39.05:373,39,0	1/1:4,29:33:90.12:864,90,0	1/1:2,19:21:51.08:493,51,0	1/1:1,19:20:54.08:521,54,0	0/0:23,0:23:66.19:0,66,783	0/0:13,0:13:33.10:0,33,399	1/1:3,20:23:51.08:493,51,0	1/1:3,26:29:75.06:710,75,0	1/1:3,34:37:99:956,99,0	1/1:1,15:16:45.07:434,45,0
chr10	81405173	.	A	ACC	1853.35	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=1.835;DP=638;FS=1.101;HRun=8;HaplotypeScore=95.3919;InbreedingCoeff=0.9904;MQ=84.49;MQ0=3;MQRankSum=-1.288;QD=23.17;ReadPosRankSum=-4.238;VQSLOD=2.1688;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,1:17:23.25:318,23,0	0/0:12,0:12:33.09:0,33,368	0/0:28,0:28:63.49:0,63,677	0/0:22,0:22:38.60:0,39,436	0/0:29,0:28:68.99:0,69,749	0/0:28,0:28:72.17:0,72,802	0/0:5,0:21:40.46:0,40,174	0/0:26,0:26:57.09:0,57,635	0/0:18,0:18:48.13:0,48,534	0/0:22,0:22:57.15:0,57,634	0/0:25,0:25:63.16:0,63,701	0/0:25,0:25:49.33:0,49,715	1/1:11,5:17:41.54:491,42,0	1/1:13,7:21:44.53:549,45,0	0/0:29,0:30:62.87:0,63,671	0/0:27,0:25:51.09:0,51,558	0/0:24,0:24:51.08:0,51,548	0/0:11,0:11:27.07:0,27,300	0/0:23,0:24:50.81:0,51,534	0/0:28,0:29:57.14:0,57,652	0/0:22,0:22:50.93:0,51,539	1/1:18,7:25:47.61:656,48,0	0/0:25,0:25:66.15:0,66,724	0/0:22,0:22:57.12:0,57,626	0/0:30,0:30:69.17:0,69,768	0/0:21,0:21:53.92:0,54,568	0/0:33,0:32:90.63:0,91,970	0/0:4,0:4:12.03:0,12,134
chr10	81405267	.	TG	T	16725.81	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=11.584;DP=737;FS=3.450;HRun=1;HaplotypeScore=76.7808;InbreedingCoeff=0.9994;MQ=86.95;MQ0=1;MQRankSum=-2.047;QD=40.70;ReadPosRankSum=2.051;VQSLOD=5.6205;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.23:0,66,1055	0/0:8,0:8:24.04:0,24,356	0/0:23,0:23:69.23:0,69,1093	0/0:26,0:26:75.24:0,75,1147	1/1:0,37:37:99:1468,105,0	0/0:29,0:29:87.26:0,87,1364	0/0:29,0:29:75.26:0,75,1196	1/1:0,28:28:84.24:1122,84,0	0/0:24,0:24:72.25:0,72,1149	1/1:0,32:32:96.32:1343,96,0	1/1:0,29:29:87.29:1216,87,0	0/0:29,0:29:87.30:0,87,1391	0/0:26,0:26:78.21:0,78,1152	0/0:23,0:23:66.17:0,66,1032	1/1:0,38:38:99:1511,108,0	1/1:0,34:34:96.32:1343,96,0	1/1:0,27:27:78.26:1091,78,0	1/1:0,17:17:51.17:709,51,0	1/1:0,20:20:57.19:797,57,0	1/1:0,46:46:99:1888,135,0	1/1:0,16:16:48.16:671,48,0	0/0:32,0:32:96.31:0,96,1512	0/0:30,0:30:87.28:0,87,1361	0/0:24,0:24:72.23:0,72,1122	1/1:0,21:21:60.20:839,60,0	1/1:0,27:26:78.26:1091,78,0	1/1:0,31:31:93.31:1301,93,0	1/1:0,8:8:24.08:335,24,0
chr10	81405298	.	AG	A	534.48	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.629;DP=706;FS=0.914;HRun=3;HaplotypeScore=107.4510;InbreedingCoeff=0.9820;MQ=79.76;MQ0=0;MQRankSum=-3.412;QD=19.80;ReadPosRankSum=-0.658;VQSLOD=2.9151;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.22:0,69,956	0/0:6,0:6:15.04:0,15,194	0/0:19,0:19:48.16:0,48,668	0/0:15,0:15:30.02:0,30,361	0/0:41,0:41:99:0,117,1631	0/0:29,0:29:87.25:0,87,1175	1/1:2,25:27:51.16:629,51,0	0/0:31,0:31:93.28:0,93,1241	0/0:18,0:18:54.18:0,54,762	0/0:27,0:27:78.22:0,78,1026	0/0:25,0:25:69.22:0,69,957	0/0:30,0:30:90.23:0,90,1213	0/0:27,0:27:81.22:0,81,1089	0/0:24,0:24:69.22:0,69,958	0/0:35,0:35:99:0,102,1357	0/0:27,0:27:75.23:0,75,1027	0/0:29,0:29:87.19:0,87,1166	0/0:19,0:19:48.09:0,48,618	0/0:22,0:22:63.21:0,63,889	0/0:38,0:38:99:0,111,1500	0/0:18,0:18:54.15:0,54,727	0/0:24,0:24:69.20:0,69,938	0/0:22,0:22:62.76:0,63,820	0/0:25,0:25:72.22:0,72,978	0/0:30,0:30:90.28:0,90,1237	0/0:24,0:24:72.22:0,72,977	0/0:41,0:40:99:0,117,1561	0/0:10,0:10:24.04:0,24,285
chr10	81406577	.	ATT	A	14054.24	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=11.171;DP=634;FS=26.064;HRun=9;HaplotypeScore=78.4874;InbreedingCoeff=0.9930;MQ=75.96;MQ0=3;MQRankSum=-4.216;QD=29.46;ReadPosRankSum=2.898;VQSLOD=3.3691;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:54.16:629,54,0	0/0:5,0:5:12.04:0,12,197	0/0:16,0:17:41.63:0,42,631	0/0:16,0:16:35.74:0,36,508	1/1:2,32:33:84.22:979,84,0	0/0:41,0:41:99:0,114,1797	1/1:3,21:24:51.15:594,51,0	1/1:4,25:31:68.64:830,69,0	0/0:26,0:26:78.26:0,78,1256	1/1:3,26:29:75.19:852,75,0	1/1:1,29:30:81.22:944,81,0	0/0:20,0:20:54.13:0,54,834	1/1:3,20:21:51.15:594,51,0	1/1:2,18:20:24.06:532,24,0	1/1:1,27:28:78.23:909,78,0	1/1:1,28:29:68.94:802,69,0	1/1:0,11:11:30.09:350,30,0	1/1:1,10:11:30.09:349,30,0	1/1:1,24:25:72.20:830,72,0	1/1:2,41:43:99:1328,114,0	1/1:1,16:17:45.13:524,45,0	1/1:1,12:13:33.09:385,33,0	0/0:14,0:14:39.11:0,39,591	0/0:16,1:18:19.20:0,19,754	1/1:1,20:21:57.17:664,57,0	1/1:2,26:29:75.21:874,75,0	1/1:3,24:27:66.19:769,66,0	1/1:2,9:11:27.07:315,27,0
chr10	81407257	.	T	TG	777.08	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.422;DP=757;FS=0.858;HRun=0;HaplotypeScore=72.2793;InbreedingCoeff=0.9768;MQ=79.18;MQ0=0;MQRankSum=-0.785;QD=31.08;ReadPosRankSum=0.067;VQSLOD=3.3276;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1560	0/0:16,0:16:48.12:0,48,633	0/0:20,0:20:60.16:0,60,776	0/0:21,0:21:47.58:0,48,584	0/0:38,0:38:99:0,114,1573	0/0:26,0:26:78.26:0,78,1089	1/1:0,25:25:57.19:872,57,0	0/0:28,0:28:84.27:0,84,1148	0/0:30,0:30:90.26:0,90,1185	0/0:37,0:37:99:0,108,1468	0/0:22,0:22:63.21:0,63,880	0/0:24,0:24:72.21:0,72,958	0/0:25,0:25:72.23:0,72,990	0/0:37,0:37:99:0,108,1431	0/0:36,0:36:99:0,108,1508	0/0:28,0:28:84.28:0,84,1173	0/0:29,0:29:87.27:0,87,1181	0/0:7,0:7:18.06:0,18,251	0/0:24,0:24:66.19:0,66,874	0/0:32,0:32:93.29:0,93,1269	0/0:30,0:30:87.26:0,87,1180	0/0:26,0:26:78.23:0,78,1055	0/0:23,0:23:69.22:0,69,947	0/0:21,0:21:63.16:0,63,842	0/0:30,0:30:87.27:0,87,1183	0/0:40,0:40:99:0,117,1603	0/0:37,0:37:99:0,111,1514	0/0:5,0:5:15.05:0,15,209
chr10	81410766	.	G	GA	4224.45	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-13.820;DP=698;FS=4.290;HRun=8;HaplotypeScore=75.4506;InbreedingCoeff=0.9915;MQ=74.42;MQ0=0;MQRankSum=-0.648;QD=28.54;ReadPosRankSum=2.367;VQSLOD=5.3584;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:83.92:0,84,747	0/0:4,0:4:12.01:0,12,110	0/0:13,0:13:29.97:0,30,261	0/0:10,0:10:24.01:0,24,218	0/0:25,0:25:65.17:0,65,602	1/1:0,32:32:93.24:1059,93,0	0/0:28,0:28:75:0,75,686	0/0:49,1:50:91.40:0,91,1078	1/1:4,19:24:56.48:609,56,0	0/0:26,0:26:72.04:0,72,659	0/0:32,1:33:49.42:0,49,707	1/1:2,39:42:89.71:1268,90,0	0/0:29,0:29:84.03:0,84,768	0/0:35,0:35:99:0,102,933	0/0:30,0:30:69.02:0,69,631	0/0:24,0:24:72.03:0,72,655	0/0:13,0:13:29.99:0,30,269	0/0:10,0:10:26.97:0,27,239	0/0:18,0:18:38.99:0,39,351	0/0:35,2:36:32.82:0,33,809	0/0:21,0:21:54.01:0,54,494	0/0:21,0:21:63.02:0,63,572	1/1:5,24:29:41.74:734,42,0	1/1:4,17:21:48.14:554,48,0	0/0:27,0:27:75.02:0,75,682	0/0:26,0:26:72.03:0,72,659	0/0:28,0:28:58.61:0,59,703	0/0:9,0:9:27.01:0,27,247
chr10	81412104	.	G	GA	30983.93	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-12.254;DP=835;FS=10.555;HRun=2;HaplotypeScore=71.7284;InbreedingCoeff=0.9406;MQ=89.18;MQ0=1;MQRankSum=-11.976;QD=41.37;ReadPosRankSum=7.476;VQSLOD=3.2565;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,45:47:99:1799,120,0	0/0:11,0:11:33.11:0,33,428	0/0:43,0:43:99:0,116,1406	0/0:32,0:32:84.22:0,84,1059	1/1:0,26:26:75.21:1099,75,0	1/1:0,21:21:57.19:854,57,0	1/1:0,27:27:75.25:1124,75,0	1/1:1,36:37:99:1596,108,0	1/1:0,37:37:99:1574,105,0	1/1:0,29:29:87.29:1294,87,0	1/1:0,20:20:54.18:809,54,0	1/1:1,34:35:99:1483,99,0	1/1:0,39:39:99:1709,114,0	1/1:0,31:31:81.27:1213,81,0	1/1:1,39:40:99:1709,114,0	1/1:1,35:36:99:1484,99,0	1/1:1,46:47:99:1839,123,0	1/1:1,28:29:78.26:1169,78,0	1/1:2,27:29:84.28:1255,84,0	1/1:0,25:25:69.23:1034,69,0	1/1:1,30:30:84.28:1259,84,0	1/1:1,23:24:63.21:944,63,0	1/1:0,29:29:81.27:1214,81,0	1/1:0,31:31:84.28:1259,84,0	1/1:0,25:25:66.22:989,66,0	1/1:0,24:24:72.23:1058,72,0	1/1:0,28:28:78.26:1169,78,0	1/1:1,1:2:3.01:45,3,0
chr10	81412623	.	G	GCTAT	5718.93	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-8.642;DP=684;FS=2.124;HRun=0;HaplotypeScore=109.5228;InbreedingCoeff=0.9836;MQ=90.15;MQ0=0;MQRankSum=-4.798;QD=57.77;ReadPosRankSum=1.067;VQSLOD=6.5902;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,25:32:66.23:1758,66,0	0/0:15,0:15:45.15:0,45,840	0/0:24,0:24:66.23:0,66,1202	0/0:31,0:31:75.23:0,75,1297	0/0:18,0:18:51.17:0,51,951	0/0:27,0:26:78.25:0,78,1414	0/0:32,0:32:93.32:0,93,1725	0/0:36,0:36:90.31:0,90,1671	0/0:21,0:21:60.21:0,60,1109	0/0:21,0:21:60.21:0,60,1120	0/0:13,0:13:33.11:0,33,597	0/0:26,0:26:75.26:0,75,1389	1/1:6,22:28:66.23:1756,66,0	1/1:7,17:24:51.17:1349,51,0	0/0:37,0:36:99:0,108,1983	0/0:50,0:50:99:0,138,2551	0/0:29,0:29:87.26:0,87,1589	0/0:11,0:11:30.10:0,30,560	0/0:19,0:19:42.14:0,42,783	0/0:16,0:16:39.13:0,39,728	0/0:40,0:40:99:0,114,2067	1/1:1,13:15:33.11:856,33,0	0/0:22,0:22:60.19:0,60,1071	0/0:35,0:35:99:0,99,1830	0/0:15,0:15:39.09:0,39,650	0/0:18,0:18:51.17:0,51,951	0/0:24,0:23:69.24:0,69,1277	0/0:5,0:5:9.03:0,9,168
chr10	81413375	.	AAT	A	699.56	PASS	AB=0.664;AC=3;AF=0.054;AN=56;BaseQRankSum=7.224;DP=751;FS=0.797;HRun=0;HaplotypeScore=112.0204;InbreedingCoeff=-0.0591;MQ=85.74;MQ0=0;MQRankSum=-7.502;QD=8.43;ReadPosRankSum=1.469;VQSLOD=3.4920;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:33.07:0,33,978	0/0:4,0:4:9.03:0,9,183	0/0:24,0:24:69.16:0,69,1297	0/0:32,0:32:95.91:0,96,1640	0/0:28,0:28:81.28:0,81,1645	0/0:24,0:24:69.24:0,69,1401	0/0:32,0:32:96.30:0,96,1865	0/0:28,0:28:84.27:0,84,1638	0/0:23,0:23:69.19:0,69,1310	0/0:23,0:23:69.23:0,69,1366	0/0:30,0:30:84.29:0,84,1705	0/0:27,0:27:81.26:0,81,1606	0/1:15,17:32:99:297,0,721	0/1:18,17:35:99:322,0,877	0/0:47,0:47:99:0,141,2864	0/0:25,0:25:75.26:0,75,1519	0/0:32,0:32:96.32:0,96,1911	0/0:35,0:35:99:0,105,2094	0/0:19,0:19:57.20:0,57,1157	0/0:34,0:34:99:0,102,1964	0/0:20,0:20:57.17:0,57,1086	0/1:8,8:15:99:180,0,329	0/0:18,0:18:54.19:0,54,1097	0/0:41,0:41:99:0,123,2480	0/0:27,0:27:81.26:0,81,1583	0/0:33,0:33:99:0,99,1992	0/0:27,0:27:81.27:0,81,1591	0/0:6,0:6:18.06:0,18,365
chr10	81413688	.	C	CT	7799.36	PASS	AB=0.561;AC=28;AF=0.500;AN=56;BaseQRankSum=-13.620;DP=568;FS=0.350;HRun=10;HaplotypeScore=64.2574;InbreedingCoeff=0.8724;MQ=72.99;MQ0=0;MQRankSum=-0.791;QD=22.54;ReadPosRankSum=-0.474;VQSLOD=5.4352;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:65.89:0,66,542	0/0:5,0:5:11.98:0,12,99	0/0:12,0:12:23.83:0,24,184	0/0:10,0:9:11.56:0,12,72	1/1:12,23:35:19.04:636,19,0	0/0:21,0:21:44.89:0,45,366	0/0:3,0:11:16.29:0,16,47	1/1:5,18:23:54.12:568,54,0	0/0:20,0:20:30.24:0,30,367	1/1:6,20:27:41.47:623,41,0	0/1:1,8:9:0.58:200,0,1	0/0:20,0:20:47.90:0,48,394	0/0:33,0:33:86.85:0,87,708	0/0:28,0:28:56.85:0,57,465	1/1:6,15:21:39.10:416,39,0	1/1:1,12:14:35.92:365,36,0	1/1:3,19:22:10.86:527,11,0	1/1:4,18:22:42.11:448,42,0	1/1:5,19:24:57.05:568,57,0	1/1:3,23:27:41.27:599,41,0	0/1:5,9:16:38.01:233,0,38	0/0:7,0:7:20.98:0,21,172	0/0:17,0:17:50.94:0,51,419	0/0:10,0:11:29:0,29,228	1/1:4,32:37:90.09:942,90,0	1/1:3,17:20:48.10:501,48,0	1/1:6,32:39:65.45:885,65,0	1/1:1,9:10:27.07:288,27,0
chr10	81413975	.	TTTG	T	404.79	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=4.999;DP=582;FS=3.257;HRun=0;HaplotypeScore=112.4909;InbreedingCoeff=0.5780;MQ=67.61;MQ0=7;MQRankSum=-5.183;QD=6.75;ReadPosRankSum=-1.810;VQSLOD=2.6341;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:63.14:0,63,1215	0/0:12,0:12:33.09:0,33,673	0/1:41,0:20:10.80:11,0,334	0/0:43,0:17:2.11:0,2,394	0/0:22,0:22:63.17:0,63,1225	0/0:21,0:21:60.28:0,60,1144	1/1:7,12:19:26.62:496,27,0	0/0:36,0:36:96.31:0,96,1731	0/0:18,0:18:51.14:0,51,1011	0/0:15,0:15:39.93:0,40,702	0/0:22,0:22:58.47:0,58,1083	0/0:17,0:17:49.77:0,50,903	0/0:19,0:19:54.18:0,54,1131	0/0:12,0:12:33.10:0,33,680	0/0:13,0:13:39.13:0,39,771	0/0:20,0:20:54.82:0,55,968	0/0:23,0:23:62.71:0,63,1151	0/0:16,0:16:41.78:0,42,824	0/0:24,0:23:63.47:0,63,1159	0/0:26,0:26:71.77:0,72,1271	0/0:11,0:11:29.28:0,29,536	0/0:11,0:11:33.09:0,33,603	0/0:19,0:19:54.17:0,54,1165	0/0:15,0:15:37.55:0,38,641	0/0:21,0:20:63.20:0,63,1263	0/0:23,0:22:64.28:0,64,1260	0/0:30,0:30:84.35:0,84,1642	0/0:8,0:8:23.29:0,23,426
chr10	81414164	.	ACTGGGAAGC	A	18658.40	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=16.428;DP=528;FS=19.751;HRun=0;HaplotypeScore=159.8969;InbreedingCoeff=0.9713;MQ=68.78;MQ0=0;MQRankSum=-14.048;QD=67.36;ReadPosRankSum=0.565;VQSLOD=2.9946;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,5626	0/0:11,0:11:33.11:0,33,1499	0/0:9,0:9:24.07:0,24,818	0/0:11,0:12:33.02:0,33,1049	1/1:2,28:30:51.17:1571,51,0	0/0:27,0:27:81.26:0,81,3763	0/0:22,0:22:66.23:0,66,3118	1/1:5,23:28:69.24:1759,69,0	0/0:23,0:23:69.22:0,69,3191	1/1:0,24:24:66.23:2054,66,0	1/1:1,24:25:57.20:1713,57,0	0/0:28,0:28:81.28:0,81,3826	0/0:18,0:18:51.17:0,51,2352	0/0:19,0:19:57.20:0,57,2775	1/1:0,15:15:36.12:1059,36,0	1/1:0,23:23:60.21:1814,60,0	1/1:4,21:25:21.07:663,21,0	1/1:1,6:7:18.06:569,18,0	1/1:2,18:19:51.17:1560,51,0	1/1:0,24:24:51.18:1551,51,0	1/1:1,9:9:21.07:618,21,0	0/0:6,0:6:15.04:0,15,582	0/0:13,0:13:39.13:0,39,1746	0/0:23,0:23:66.23:0,66,3267	1/1:0,13:13:36.12:1100,36,0	1/1:0,14:13:39.11:1053,39,0	1/1:0,18:18:48.16:1480,48,0	1/1:0,1:1:3.01:95,3,0
chr10	81414306	.	T	TA	2746.39	PASS	AB=0.717;AC=43;AF=0.768;AN=56;BaseQRankSum=-0.999;DP=585;FS=2.677;HRun=16;HaplotypeScore=95.4032;InbreedingCoeff=0.1631;MQ=74.44;MQ0=3;MQRankSum=-0.872;QD=5.83;ReadPosRankSum=0.117;VQSLOD=2.8402;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:50:23.12:0,23,121	0/1:9,0:10:13.22:13,0,28	0/0:39,0:21:1.56:0,2,44	0/0:24,0:16:1.07:0,1,26	1/1:4,10:14:22.27:146,22,0	1/1:26,0:26:27.50:125,27,0	1/1:10,0:10:6:85,6,0	1/1:19,16:36:22.40:266,22,0	1/1:16,0:16:27.45:123,27,0	1/1:16,13:29:19.41:198,19,0	1/1:7,14:22:17.19:207,17,0	1/1:22,0:25:44.16:200,44,0	1/1:12,0:12:19.53:89,20,0	1/1:16,0:16:10.38:47,10,0	1/1:3,15:18:14.97:120,15,0	0/1:8,15:23:15.96:78,0,16	1/1:13,18:32:2.04:211,2,0	1/1:6,12:21:4.03:114,4,0	0/1:14,9:23:5.24:105,0,5	1/1:6,13:18:15.74:142,16,0	0/1:4,2:5:10.77:18,0,11	1/1:8,0:8:19.05:84,19,0	1/1:20,0:21:25.69:114,26,0	1/1:15,0:14:21.76:96,22,0	0/1:3,5:8:7.77:39,0,8	1/1:7,13:19:21.36:112,21,0	0/1:13,17:29:22.06:110,0,22	0/1:5,4:9:4.81:56,0,5
chr10	81414317	.	A	AAAG	3574.89	PASS	AB=0.788;AC=16;AF=0.286;AN=56;BaseQRankSum=0.489;DP=624;FS=4.129;HRun=0;HaplotypeScore=102.1604;InbreedingCoeff=0.8356;MQ=77.49;MQ0=4;MQRankSum=-2.251;QD=16.63;ReadPosRankSum=5.902;VQSLOD=3.2146;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,120,1089	0/0:9,0:9:17.90:0,18,185	0/1:45,0:24:0.53:1,0,266	0/0:28,0:17:12.38:0,12,156	0/0:19,0:19:34.39:0,34,303	1/1:4,21:28:29.88:550,30,0	0/0:9,0:9:19.60:0,20,102	0/0:28,0:28:67.87:0,68,489	1/1:0,19:20:30.10:567,30,0	0/0:31,0:30:78.19:0,78,617	0/0:25,0:25:55.18:0,55,391	1/1:5,28:35:30.91:794,31,0	1/1:1,1:19:23.76:307,24,0	0/1:6,2:23:36.11:130,0,36	0/0:18,0:18:26.28:0,26,161	0/0:27,0:27:44.34:0,44,351	0/0:32,0:32:65.70:0,66,509	0/0:18,0:18:17.71:0,18,114	0/0:21,0:21:56.84:0,57,413	0/0:19,0:18:36.34:0,36,254	0/0:8,0:7:11.88:0,12,110	1/1:0,0:11:26.92:335,27,0	1/1:4,13:20:29.88:442,30,0	1/1:0,13:13:24.08:449,24,0	0/0:7,0:7:8.76:0,9,74	0/0:26,0:24:59.08:0,59,461	0/0:31,0:30:53.12:0,53,444	0/0:8,0:8:13.31:0,13,104
chr10	81414319	.	A	AG	179.34	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=6.605;DP=619;FS=2.671;HRun=0;HaplotypeScore=94.0573;InbreedingCoeff=0.6378;MQ=78.18;MQ0=4;MQRankSum=-2.452;QD=2.13;ReadPosRankSum=5.027;VQSLOD=1.9267;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,121,913	0/0:7,0:7:16.24:0,16,160	0/0:45,0:25:27.16:0,27,362	0/0:28,0:17:25.05:0,25,271	0/0:20,0:20:44.08:0,44,287	0/1:22,0:22:0.52:6,0,1	1/1:2,7:9:18.37:261,18,0	0/0:28,0:28:51.75:0,52,385	1/1:20,0:20:8.44:19,8,0	0/0:31,0:30:65.54:0,66,534	0/0:27,0:27:43.91:0,44,327	0/0:34,0:34:8.83:0,9,61	0/0:21,0:21:13.58:0,14,66	0/0:22,0:22:18.66:0,19,126	0/0:18,0:18:15.11:0,15,96	0/0:28,0:28:37.57:0,38,319	0/0:32,0:32:50:0,50,374	0/0:18,0:18:3.69:0,4,58	0/0:22,0:22:54.86:0,55,428	0/0:19,0:18:27.09:0,27,177	0/0:8,0:7:6.93:0,7,91	0/0:12,0:12:23.21:0,23,116	0/1:19,0:19:10.38:10,0,60	1/1:14,0:13:5.18:13,5,0	0/0:7,0:7:9.09:0,9,69	0/0:26,0:24:57.35:0,57,428	0/0:30,0:29:42.26:0,42,348	0/0:8,0:8:10.06:0,10,77
chr10	81414727	.	G	GAGGGA	44689.89	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=0.462;DP=724;FS=2.448;HRun=0;HaplotypeScore=162.5411;InbreedingCoeff=0.9095;MQ=73.44;MQ0=0;MQRankSum=-11.918;QD=67.41;ReadPosRankSum=4.332;VQSLOD=6.0157;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,35:45:90.31:2780,90,0	0/0:11,0:11:30.10:0,30,630	0/0:29,0:29:7.39:0,7,1207	0/0:21,0:21:57.14:0,57,1078	1/1:4,32:37:95.77:2702,96,0	1/1:2,27:29:78.27:2409,78,0	1/1:1,16:18:36.12:1111,36,0	1/1:6,18:28:78.26:2072,78,0	1/1:5,17:23:51.17:1535,51,0	1/1:2,24:26:72.20:2137,72,0	1/1:7,20:27:54.10:1585,54,0	1/1:4,33:40:81.13:2408,81,0	1/1:3,33:37:87.30:2608,87,0	1/1:4,22:26:60.21:1794,60,0	1/1:0,28:28:66.23:2035,66,0	1/1:3,25:29:66.23:1980,66,0	1/1:9,17:26:51.17:1563,51,0	1/1:4,11:15:36.12:1113,36,0	1/1:4,16:21:57.20:1659,57,0	1/1:2,37:39:83.75:2275,84,0	1/1:5,10:18:20.96:498,21,0	1/1:1,16:18:48.16:1479,48,0	1/1:2,25:29:63.17:1872,63,0	1/1:6,15:22:29.89:845,30,0	1/1:1,20:21:57.17:1744,57,0	1/1:3,24:27:78.09:2262,78,0	1/1:1,28:29:68.97:2134,69,0	1/1:0,2:2:3.01:93,3,0
chr10	81415553	.	C	CCCTACTGTT	1453.15	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.914;DP=755;FS=1.093;HRun=0;HaplotypeScore=272.4419;InbreedingCoeff=0.9877;MQ=78.08;MQ0=0;MQRankSum=-5.867;QD=58.13;ReadPosRankSum=-1.429;VQSLOD=2.9250;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,157,4213	0/0:8,0:8:21.07:0,21,613	0/0:35,0:32:71.11:0,71,1644	0/0:39,0:38:78.14:0,78,1694	0/0:28,0:28:66.23:0,66,1842	0/0:32,0:32:84.29:0,84,2309	1/1:10,13:25:36.03:1548,36,0	0/0:31,0:31:75.22:0,75,1732	0/0:18,0:18:45.13:0,45,1188	0/0:18,0:18:48.16:0,48,1351	0/0:25,0:25:69.24:0,69,1896	0/0:28,0:28:69.21:0,69,1831	0/0:31,0:31:78.27:0,78,2226	0/0:29,0:29:78.26:0,78,2113	0/0:30,0:30:84.27:0,84,2250	0/0:27,0:26:65.82:0,66,1925	0/0:48,0:48:99:0,126,3412	0/0:12,0:11:33.11:0,33,958	0/0:21,0:21:49.04:0,49,1119	0/0:35,0:35:90.31:0,90,2543	0/0:26,0:26:60.17:0,60,1601	0/0:25,0:25:69.22:0,69,1838	0/0:23,0:23:57.18:0,57,1496	0/0:22,0:22:57.20:0,57,1621	0/0:22,0:22:57.17:0,57,1449	0/0:22,0:22:66.22:0,66,1832	0/0:35,0:35:87.29:0,87,2327	0/0:6,0:6:18.05:0,18,462
chr10	81415573	.	TCC	T	13067.80	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=0.491;DP=745;FS=12.944;HRun=6;HaplotypeScore=122.8791;InbreedingCoeff=0.9956;MQ=76.75;MQ0=0;MQRankSum=-4.243;QD=34.57;ReadPosRankSum=5.068;VQSLOD=3.5462;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,169,2920	0/0:9,0:9:27.09:0,27,486	0/0:36,0:33:74.69:0,75,1223	0/0:29,0:29:58.26:0,58,1089	1/1:0,24:24:63.21:840,63,0	0/0:2,0:30:67.30:0,67,238	0/0:26,0:26:66.19:0,66,1151	1/1:3,26:29:75.23:984,75,0	0/0:1,0:24:52.40:0,52,184	1/1:0,16:16:45.15:600,45,0	1/1:1,25:26:66.17:860,66,0	0/0:2,0:21:47.64:0,48,181	0/0:33,0:33:93.30:0,93,1604	0/0:27,0:27:75.24:0,75,1320	1/1:0,33:33:96.32:1280,96,0	1/1:1,24:25:66.22:881,66,0	1/1:1,48:49:99:1720,129,0	1/1:0,14:14:33.11:440,33,0	1/1:2,17:19:51.17:680,51,0	1/1:1,33:34:96.27:1260,96,0	1/1:0,20:20:54.18:720,54,0	0/0:25,0:25:75.26:0,75,1346	0/0:2,0:21:44.74:0,45,171	0/0:1,0:23:52.87:0,53,196	1/1:1,25:26:66.21:880,66,0	1/1:3,21:24:51.16:680,51,0	1/1:2,33:35:81.27:1081,81,0	1/1:0,4:4:12.04:160,12,0
chr10	81415970	.	TG	T	2755.30	PASS	AC=30;AF=0.556;AN=54;BaseQRankSum=3.187;DP=355;FS=17.622;HRun=2;HaplotypeScore=67.1304;InbreedingCoeff=0.9461;MQ=69.16;MQ0=27;MQRankSum=-4.958;QD=15.84;ReadPosRankSum=2.228;VQSLOD=2.3190;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:9:23.83:0,24,175	0/0:7,0:6:15:0,15,158	0/0:41,0:14:21.92:0,22,186	0/0:37,0:11:15.86:0,16,123	1/1:12,0:13:30.90:212,31,0	0/0:13,0:13:27.52:0,28,182	1/1:5,0:4:8.41:42,8,0	1/1:4,0:4:5.93:47,6,0	0/0:7,0:7:11.63:0,12,80	1/1:16,3:18:47.99:424,48,0	1/1:5,5:12:28.40:186,28,0	0/0:16,0:14:29.73:0,30,209	0/0:7,0:7:9.42:0,9,69	0/0:11,0:11:20.99:0,21,177	1/1:8,0:9:20.78:150,21,0	1/1:11,2:15:41.01:274,41,0	1/1:7,4:12:33.60:236,34,0	1/1:9,1:8:20.88:160,21,0	1/1:3,8:10:29.92:245,30,0	1/1:16,1:17:35.25:255,35,0	1/1:4,0:4:11.82:80,12,0	0/0:11,0:10:18.59:0,19,110	0/0:10,0:10:17.65:0,18,134	0/0:9,0:7:17.89:0,18,133	1/1:15,0:16:41.66:316,42,0	1/1:8,5:13:32.07:228,32,0	1/1:8,0:7:17.54:120,18,0	./.
chr10	81415992	.	TGGTTC	T	1983.38	PASS	AB=0.933;AC=34;AF=0.630;AN=54;BaseQRankSum=2.911;DP=204;FS=0.000;HRun=0;HaplotypeScore=38.9315;InbreedingCoeff=0.2420;MQ=39.79;MQ0=39;MQRankSum=-0.730;QD=12.55;ReadPosRankSum=2.099;VQSLOD=1.9342;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:5:4.34:4,0,60	0/0:5,0:4:9.02:0,9,108	0/0:14,1:2:2.94:0,3,18	0/1:16,0:2:0:0,0,0	0/1:7,3:7:6.87:96,0,7	1/1:5,2:7:14.08:195,14,0	1/1:7,0:4:0.15:63,0,0	0/1:6,0:5:1.56:56,0,2	1/1:2,0:3:8.85:87,9,0	1/1:4,2:5:12.02:134,12,0	0/1:10,0:9:34.72:159,0,35	1/1:7,3:8:14.87:171,15,0	0/0:8,0:7:15.05:0,15,194	0/1:6,0:6:24.39:24,0,39	1/1:6,0:3:0:60,0,0	1/1:5,0:5:12.04:160,12,0	1/1:9,0:7:20.91:205,21,0	1/1:6,0:4:9.74:59,10,0	0/1:8,0:6:29.91:47,0,30	1/1:5,3:7:8.99:87,9,0	0/0:4,0:2:2.37:0,2,8	0/0:7,0:5:2.04:0,2,36	1/1:4,3:7:10.57:167,11,0	0/0:3,0:1:0.89:0,1,2	1/1:8,0:5:12.04:175,12,0	1/1:6,0:6:15.02:156,15,0	0/1:4,2:4:1.49:28,0,1	./.
chr10	81418240	.	ACTGT	A	2181.92	PASS	AC=12;AF=0.750;AN=16;BaseQRankSum=4.997;DP=321;FS=0.000;HRun=0;HaplotypeScore=43.0166;MQ=15.09;MQ0=252;MQRankSum=-0.560;QD=28.34;ReadPosRankSum=-0.090;VQSLOD=2.8313;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:13,0:10:18.06:0,18,478	./.	./.	1/1:1,18:12:24.08:447,24,0	./.	./.	./.	./.	1/1:1,7:3:9.03:164,9,0	1/1:2,13:10:18.06:335,18,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:1,19:16:48.16:892,48,0	./.	./.	0/0:10,0:5:15.05:0,15,398	./.	1/1:3,9:7:15.05:277,15,0	./.	./.	1/1:0,3:3:9.03:168,9,0
chr10	81419114	.	T	TA	2778.08	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.245;DP=689;FS=2.835;HRun=1;HaplotypeScore=64.2801;InbreedingCoeff=0.9992;MQ=88.07;MQ0=0;MQRankSum=-3.453;QD=38.06;ReadPosRankSum=2.959;VQSLOD=4.4197;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,1736	0/0:9,0:9:27.09:0,27,350	0/0:26,0:26:36.92:0,37,751	0/0:24,0:24:63.17:0,63,784	0/0:28,0:28:81.25:0,81,1036	0/0:27,0:27:81.26:0,81,1050	0/0:14,0:14:42.12:0,42,530	0/0:31,0:31:93.29:0,93,1184	0/0:28,0:28:78.22:0,78,982	0/0:33,0:33:99:0,99,1259	0/0:19,0:19:54.16:0,54,676	0/0:24,0:24:69.21:0,69,881	1/1:2,33:35:90.30:1348,90,0	1/1:0,17:17:48.16:719,48,0	0/0:31,0:31:90.26:0,90,1127	0/0:18,0:18:54.18:0,54,698	0/0:16,0:16:45.14:0,45,571	0/0:9,0:9:27.09:0,27,349	0/0:23,0:23:63.18:0,63,792	0/0:30,0:30:90.28:0,90,1154	0/0:26,0:26:75.18:0,75,938	1/1:0,21:21:57.19:854,57,0	0/0:39,0:39:99:0,117,1475	0/0:21,0:21:60.19:0,60,779	0/0:18,0:18:54.16:0,54,687	0/0:27,0:27:78.23:0,78,976	0/0:37,0:35:99:0,111,1436	0/0:12,0:12:36.12:0,36,463
chr10	81421308	.	AATTCCTATATGGGG	A	1727.23	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.194;DP=636;FS=8.616;HRun=0;HaplotypeScore=287.6499;InbreedingCoeff=0.9688;MQ=73.32;MQ0=0;MQRankSum=-4.934;QD=41.12;ReadPosRankSum=0.057;VQSLOD=1.7131;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:62.79:0,63,2349	0/0:14,0:14:42.14:0,42,2833	0/0:20,0:18:54.19:0,54,2870	0/0:20,0:18:23.26:0,23,1884	0/0:31,0:31:87.25:0,87,4365	0/0:23,0:23:21.07:0,21,1129	0/0:21,0:21:15.05:0,15,333	0/0:44,0:44:99:0,132,7746	0/0:23,0:23:30.54:0,31,1236	0/0:23,0:23:66.23:0,66,3934	0/0:27,0:27:80.86:0,81,4629	0/0:19,0:19:26.85:0,27,1106	1/1:0,10:10:12.04:470,12,0	1/1:0,18:18:21.07:862,21,0	0/0:39,0:39:99:0,108,5518	0/0:38,0:38:99:0,105,5692	0/0:14,0:14:39.13:0,39,2439	0/0:12,0:12:36.12:0,36,2015	0/0:23,0:23:66.20:0,66,3949	0/0:26,0:26:75.26:0,75,3644	0/0:22,0:22:62.81:0,63,3643	1/1:1,13:14:14.77:531,15,0	0/0:21,0:21:26.61:0,27,1387	0/0:22,0:22:24.05:0,24,1186	0/0:26,0:26:72.25:0,72,3718	0/0:24,0:24:72.25:0,72,4507	0/0:34,0:34:93.32:0,93,4802	0/0:6,0:6:18.06:0,18,784
chr10	81421319	.	GGGGTGTGTGTAT	G	1268.58	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=11.353;DP=654;FS=5.273;HRun=0;HaplotypeScore=263.0496;InbreedingCoeff=-0.1716;MQ=63.23;MQ0=10;MQRankSum=-10.923;QD=3.93;ReadPosRankSum=2.403;VQSLOD=2.2099;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:99:331,0,474	0/0:16,0:16:48.16:0,48,1540	0/0:22,0:15:36.01:0,36,547	0/0:22,0:11:26.89:0,27,395	0/1:33,0:33:86.91:87,0,654	0/0:24,0:24:17.62:0,18,318	1/1:0,20:20:6.02:230,6,0	0/0:44,0:41:99:0,117,1972	0/0:18,0:18:6.01:0,6,167	0/1:23,0:23:99:104,0,758	0/1:25,0:25:33.69:34,0,842	0/0:17,0:17:6.77:0,7,187	0/0:11,0:11:4.55:0,5,100	0/0:19,0:19:1.27:0,1,77	0/1:38,0:38:99:122,0,732	0/1:38,0:38:99:119,0,737	0/0:15,0:15:5.24:0,5,457	0/0:9,0:9:13.90:0,14,345	0/0:22,0:22:60.15:0,60,869	0/1:29,0:29:99:119,0,348	0/0:27,0:26:63.16:0,63,885	0/0:18,0:18:15.28:0,15,133	0/0:23,0:23:26.77:0,27,522	0/0:23,0:23:21.02:0,21,419	0/1:31,0:31:99:114,0,463	0/1:26,0:25:1.66:2,0,856	0/1:30,0:30:99:104,0,609	0/1:5,0:5:22.17:52,0,22
chr10	81421326	.	G	GTGTGTT	790.17	PASS	AB=0.868;AC=11;AF=0.196;AN=56;BaseQRankSum=2.211;DP=673;FS=5.118;HRun=0;HaplotypeScore=224.4243;InbreedingCoeff=0.6376;MQ=56.73;MQ0=15;MQRankSum=-2.967;QD=5.00;ReadPosRankSum=-4.281;VQSLOD=1.0411;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:23:99:139,0,144	0/0:15,0:15:45.11:0,45,873	0/0:16,0:9:21.05:0,21,424	0/0:21,0:10:23.05:0,23,349	0/0:33,0:33:54.18:0,54,1107	1/1:6,16:26:9.30:152,9,0	0/0:20,0:20:6.01:0,6,68	0/0:41,0:36:99:0,105,2284	1/1:20,0:19:8.39:132,8,0	0/0:29,0:28:69.47:0,69,1383	0/0:30,0:30:69.15:0,69,1353	1/1:5,12:20:7.77:180,8,0	0/1:14,0:14:1.37:1,0,95	0/0:23,0:23:25.58:0,26,291	0/0:37,0:37:75.17:0,75,1612	0/0:38,0:37:50.85:0,51,1366	0/0:13,0:13:33.10:0,33,645	0/0:9,0:9:21.07:0,21,444	0/0:20,0:20:42.14:0,42,915	0/0:27,0:27:45.15:0,45,942	0/0:23,0:23:41.96:0,42,820	0/0:24,0:24:20.22:0,20,195	1/1:7,16:27:12.32:181,12,0	0/1:9,15:26:7.24:159,0,7	0/0:32,0:31:39.11:0,39,807	0/0:25,0:24:63.43:0,63,1288	0/0:31,0:31:71.92:0,72,1499	0/0:7,0:7:16.30:0,16,313
chr10	81421328	.	G	GTGTT	538.88	PASS	AB=0.870;AC=10;AF=0.179;AN=56;BaseQRankSum=2.566;DP=670;FS=15.608;HRun=0;HaplotypeScore=204.7200;InbreedingCoeff=0.3520;MQ=55.67;MQ0=16;MQRankSum=-0.551;QD=3.62;ReadPosRankSum=-2.634;VQSLOD=1.2889;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:24:95.55:96,0,135	0/0:15,0:15:45.11:0,45,778	0/0:16,0:9:21.05:0,21,382	0/0:20,0:9:23.05:0,23,337	0/0:33,0:33:54.17:0,54,974	1/1:25,0:25:6.33:78,6,0	0/0:21,0:21:4.20:0,4,49	0/0:42,0:37:99:0,108,1985	0/1:4,13:18:10.74:74,0,11	0/0:29,0:28:67.12:0,67,1154	0/0:31,0:31:69.17:0,69,1247	1/1:19,1:20:4.73:115,5,0	0/0:13,0:13:15.03:0,15,145	0/0:23,0:23:26.29:0,26,277	0/0:35,0:35:75.17:0,75,1361	0/0:36,0:34:71.91:0,72,1191	0/0:13,0:13:33.10:0,33,580	0/1:9,0:9:18.40:18,0,378	0/0:19,0:19:44.82:0,45,824	0/0:27,0:27:44.96:0,45,790	0/0:26,0:25:41.96:0,42,749	0/0:25,0:25:25.15:0,25,196	1/1:26,1:27:1.19:183,1,0	0/1:21,2:23:26.72:115,0,27	0/0:32,0:32:39.10:0,39,681	0/0:26,0:25:66.11:0,66,1142	0/0:31,0:31:72.25:0,72,1292	0/0:7,0:7:15.52:0,16,256
chr10	81421330	.	ATGTGTGTGTG	A	7934.40	PASS	AB=0.875;AC=26;AF=0.500;AN=52;BaseQRankSum=-2.304;DP=668;FS=14.599;HRun=0;HaplotypeScore=219.2398;InbreedingCoeff=0.5246;MQ=53.91;MQ0=16;MQRankSum=-5.058;QD=18.89;ReadPosRankSum=4.648;VQSLOD=2.6388;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:21.04:0,21,668	0/0:13,0:13:21.07:0,21,824	./.	./.	1/1:14,20:35:21.01:535,21,0	0/0:26,0:26:12.03:0,12,304	0/1:22,0:22:7.84:104,0,8	1/1:40,0:35:11.80:147,12,0	0/0:18,0:17:6.02:0,6,238	1/1:14,14:28:38.69:725,39,0	1/1:14,17:31:29.85:538,30,0	0/0:19,0:19:5.82:0,6,137	0/0:10,0:13:15.05:0,15,331	0/0:19,0:23:20.83:0,21,367	1/1:17,18:35:36.12:1077,36,0	0/1:16,19:33:17.28:951,0,17	0/1:11,3:14:14.93:170,0,15	0/1:7,2:9:14.83:82,0,15	0/1:17,0:17:2.35:21,0,2	1/1:10,17:28:36.06:928,36,0	0/1:25,1:25:94.92:205,0,95	0/0:21,0:28:39.50:0,39,855	0/0:26,0:26:17.80:0,18,542	0/0:23,0:23:12.02:0,12,318	1/1:11,23:33:30.06:734,30,0	1/1:17,9:25:20.95:465,21,0	1/1:15,17:32:30.02:897,30,0	1/1:2,5:7:10.19:356,10,0
chr10	81421445	.	C	CATGAAT	10959	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-11.711;DP=656;FS=39.409;HRun=0;HaplotypeScore=124.1440;InbreedingCoeff=0.9948;MQ=82.69;MQ0=0;MQRankSum=-15.256;QD=81.18;ReadPosRankSum=3.524;VQSLOD=3.4369;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:14:27.09:1011,27,0	0/0:11,0:11:33.10:0,33,794	0/0:23,0:23:66.18:0,66,1474	0/0:24,0:24:69.22:0,69,1652	0/0:30,0:30:87.30:0,87,2169	1/1:0,24:26:72.25:2696,72,0	1/1:0,7:13:18.06:674,18,0	0/0:37,0:37:99:0,111,2699	1/1:0,17:23:48.16:1796,48,0	0/0:30,0:30:89.90:0,90,2240	0/0:17,0:17:51.18:0,51,1281	1/1:0,14:18:45.15:1650,45,0	0/0:28,0:28:81.26:0,81,1986	0/0:26,0:26:78.27:0,78,1996	0/0:38,0:38:99:0,114,2763	0/0:34,0:34:99:0,102,2514	0/0:12,0:12:36.12:0,36,919	0/0:8,0:8:24.04:0,24,558	0/0:21,0:21:60.19:0,60,1459	0/0:33,0:33:99:0,99,2445	0/0:27,0:27:78.15:0,78,1775	0/0:22,0:22:66.23:0,66,1638	1/1:0,23:29:69.19:2460,69,0	1/1:1,8:12:17.58:673,18,0	0/0:32,0:31:96.33:0,96,2460	0/0:29,0:29:84.26:0,84,2025	0/0:33,0:33:99:0,99,2500	0/0:6,0:6:18.06:0,18,450
chr10	81422712	.	C	CT	5077.68	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-15.519;DP=660;FS=7.546;HRun=7;HaplotypeScore=62.1572;InbreedingCoeff=0.9943;MQ=79.67;MQ0=0;MQRankSum=-0.814;QD=29.87;ReadPosRankSum=2.578;VQSLOD=5.3317;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:21:16.16:475,16,0	0/0:10,0:10:27.04:0,27,260	0/0:18,0:18:29.69:0,30,319	0/0:18,0:18:36.89:0,37,331	0/0:27,0:27:81.11:0,81,776	1/1:1,28:29:75.23:906,75,0	1/1:1,14:15:39.12:471,39,0	0/0:38,0:38:99:0,99,956	1/1:2,24:26:66.20:797,66,0	0/0:24,0:24:72.11:0,72,691	0/0:28,0:28:72.10:0,72,690	1/1:1,28:29:75.23:906,75,0	0/0:28,0:28:72.11:0,72,695	0/0:27,0:27:67.82:0,68,714	0/0:27,0:27:66.10:0,66,637	0/0:29,0:29:78.08:0,78,738	0/0:17,0:17:45.05:0,45,428	0/0:11,0:11:27.04:0,27,260	0/0:22,0:22:54.06:0,54,514	0/0:31,0:31:87.10:0,87,825	0/0:17,0:17:48.04:0,48,453	0/0:20,0:20:54.08:0,54,521	1/1:4,25:29:69.21:834,69,0	1/1:0,21:21:57.17:689,57,0	0/0:32,0:32:84.09:0,84,795	0/0:28,0:28:72.09:0,72,686	0/0:33,0:33:90.10:0,90,852	0/0:5,0:5:15.02:0,15,145
chr10	81423229	.	AC	A	2612.16	PASS	AB=0.542;AC=13;AF=0.232;AN=56;BaseQRankSum=10.178;DP=493;FS=1.390;HRun=7;HaplotypeScore=62.9804;InbreedingCoeff=0.9218;MQ=85.51;MQ0=0;MQRankSum=-2.279;QD=21.59;ReadPosRankSum=1.225;VQSLOD=3.2425;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:33.07:336,33,0	0/0:12,0:12:36.12:0,36,453	0/0:20,0:20:60.08:0,60,695	0/0:19,0:18:45.14:0,45,552	0/0:32,0:32:84.25:0,84,1035	1/1:3,26:29:72.14:728,72,0	1/1:3,8:11:21.05:214,21,0	0/0:27,0:27:66.21:0,66,830	0/1:2,11:13:1.65:301,0,2	0/0:11,0:11:33.11:0,33,415	0/0:15,0:15:45.14:0,45,564	1/1:1,18:19:51.11:520,51,0	0/0:13,0:13:34.34:0,34,407	0/0:14,0:14:39.12:0,39,477	0/0:21,0:21:54.15:0,54,656	0/0:13,0:13:33.11:0,33,415	0/0:21,0:20:57.18:0,57,715	0/0:4,0:4:6.02:0,6,75	0/0:16,0:16:39.12:0,39,491	0/0:30,0:30:78.23:0,78,953	0/0:13,0:13:39.12:0,39,490	0/0:15,0:15:42.13:0,42,528	1/1:1,13:14:30.07:306,30,0	1/1:3,15:18:39.08:398,39,0	0/0:23,0:23:60.18:0,60,744	0/0:25,0:25:63.18:0,63,768	0/0:15,0:15:45.14:0,45,560	0/0:13,0:13:36.12:0,36,453
chr10	81423631	.	AT	A	2278.77	PASS	AB=0.520;AC=9;AF=0.161;AN=56;BaseQRankSum=11.109;DP=532;FS=10.795;HRun=6;HaplotypeScore=49.1052;InbreedingCoeff=0.9129;MQ=73.37;MQ0=0;MQRankSum=0.715;QD=25.04;ReadPosRankSum=2.848;VQSLOD=2.9345;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:51.17:0,51,670	0/0:11,0:11:33.11:0,33,434	0/0:7,0:7:15.03:0,15,174	0/0:10,0:10:8.70:0,9,184	0/0:27,0:27:81.26:0,81,1061	1/1:0,18:18:54.14:580,54,0	0/0:11,0:11:30.07:0,30,362	0/0:28,0:28:81.26:0,81,1060	1/1:1,14:15:30.07:322,30,0	0/0:20,0:20:54.18:0,54,711	0/0:19,0:19:54.17:0,54,703	1/1:1,16:17:39.10:419,39,0	0/0:21,0:21:60.20:0,60,789	0/0:12,0:12:30.07:0,30,365	0/0:21,0:21:63.19:0,63,813	0/0:25,0:25:72.22:0,72,930	0/0:32,0:32:93.30:0,93,1223	0/0:9,0:9:24.08:0,24,316	0/0:14,0:14:36.12:0,36,469	0/0:27,0:27:75.24:0,75,987	0/0:16,0:16:45.14:0,45,576	0/0:23,0:23:66.21:0,66,867	1/1:1,27:28:72.18:774,72,0	0/1:1,12:13:0.38:348,0,0	0/0:22,0:22:66.19:0,66,847	0/0:29,0:29:78.25:0,78,1010	0/0:28,0:28:81.26:0,81,1062	0/0:8,0:8:17.72:0,18,222
chr10	81423756	.	TA	T	3188.04	PASS	AB=0.950;AC=15;AF=0.268;AN=56;BaseQRankSum=14.952;DP=548;FS=0.804;HRun=8;HaplotypeScore=63.3106;InbreedingCoeff=0.9155;MQ=80.40;MQ0=0;MQRankSum=-0.335;QD=21.84;ReadPosRankSum=2.598;VQSLOD=4.1830;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:48.03:454,48,0	0/0:10,0:10:21.05:0,21,242	0/0:23,0:23:57.10:0,57,632	0/1:18,1:19:8.74:9,0,205	0/0:36,0:36:99:0,99,1172	1/1:0,27:27:81.13:782,81,0	1/1:1,18:19:54.09:521,54,0	0/0:26,0:26:57.64:0,58,680	1/1:1,17:18:45.07:434,45,0	0/0:15,0:15:42.13:0,42,507	0/0:24,0:24:60.18:0,60,725	1/1:2,17:19:45.07:434,45,0	0/0:20,0:20:51.16:0,51,616	0/0:13,0:13:33.09:0,33,389	0/0:21,0:21:54.17:0,54,652	0/0:23,0:23:69.19:0,69,811	0/0:26,0:26:72.22:0,72,866	0/0:10,0:10:30.09:0,30,362	0/0:18,0:18:51.13:0,51,588	0/0:25,0:25:69.21:0,69,834	0/0:7,0:7:18.06:0,18,217	0/0:16,0:16:48.15:0,48,580	1/1:0,18:18:51.08:492,51,0	1/1:1,9:10:27.04:261,27,0	0/0:21,0:21:57.17:0,57,678	0/0:25,0:25:66.20:0,66,797	0/0:37,0:37:99:0,108,1289	0/0:6,0:6:18.02:0,18,202
chr10	81426760	.	TTAG	T	3587.75	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.265;DP=570;FS=2.317;HRun=0;HaplotypeScore=102.8373;InbreedingCoeff=0.9939;MQ=77.06;MQ0=0;MQRankSum=-14.178;QD=33.22;ReadPosRankSum=1.627;VQSLOD=4.3521;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,11:13:39.01:426,39,0	0/0:12,0:12:36.12:0,36,871	0/0:12,0:12:36.12:0,36,789	0/0:18,0:18:36.01:0,36,1043	0/0:35,0:35:99:0,105,2538	1/1:4,13:17:51.13:596,51,0	1/1:2,5:7:17.97:182,18,0	0/0:34,0:34:99:0,99,2254	1/1:0,20:20:60.18:724,60,0	0/0:27,0:27:78.27:0,78,1871	0/0:27,0:27:81.25:0,81,1887	1/1:1,15:16:48.11:554,48,0	0/0:17,0:17:51.16:0,51,1192	0/0:18,0:18:54.19:0,54,1248	0/0:21,0:21:63.22:0,63,1502	0/0:15,0:15:45.14:0,45,1060	0/0:21,0:21:63.17:0,63,1423	0/0:16,0:16:48.16:0,48,1089	0/0:15,0:15:45.15:0,45,1042	0/0:37,0:37:99:0,111,2732	0/0:15,0:15:45.15:0,45,1108	0/0:21,0:21:63.21:0,63,1505	1/1:0,26:26:78.24:930,78,0	1/1:1,8:9:14.79:176,15,0	0/0:32,0:32:96.33:0,96,2319	0/0:25,0:25:75.25:0,75,1798	0/0:37,0:37:99:0,111,2584	0/0:7,0:7:18.04:0,18,384
chr10	81426765	.	AAAT	A	3476.13	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.233;DP=571;FS=3.690;HRun=0;HaplotypeScore=102.9433;InbreedingCoeff=0.9883;MQ=79.74;MQ0=0;MQRankSum=-14.901;QD=34.76;ReadPosRankSum=3.530;VQSLOD=4.5367;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:33.05:386,33,0	0/0:14,0:14:42.14:0,42,980	0/0:16,0:16:45.09:0,45,1031	0/0:18,0:18:45.15:0,45,1069	0/0:35,0:35:99:0,105,2586	1/1:1,13:14:42.13:526,42,0	1/1:0,5:5:12.04:143,12,0	0/0:33,0:33:96.33:0,96,2358	1/1:0,20:20:60.19:743,60,0	0/0:30,0:30:90.31:0,90,2214	0/0:25,0:25:75.26:0,75,1839	1/1:0,15:15:45.11:541,45,0	0/0:18,0:18:54.19:0,54,1321	0/0:17,0:17:51.15:0,51,1161	0/0:21,0:21:63.22:0,63,1497	0/0:14,0:14:42.14:0,42,1036	0/0:19,0:19:57.20:0,57,1405	0/0:16,0:16:45.11:0,45,1040	0/0:16,0:16:48.16:0,48,1103	0/0:39,0:39:99:0,117,2812	0/0:16,0:16:48.15:0,48,1109	0/0:23,0:23:69.24:0,69,1627	1/1:0,26:26:78.24:955,78,0	1/1:0,8:8:14.78:181,15,0	0/0:34,0:34:99:0,102,2460	0/0:25,0:25:75.25:0,75,1761	0/0:36,0:36:99:0,108,2660	0/0:6,0:6:15.05:0,15,369
chr10	81427701	.	T	TG	765.37	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=1.315;DP=490;FS=0.621;HRun=2;HaplotypeScore=78.5267;InbreedingCoeff=0.3617;MQ=71.80;MQ0=0;MQRankSum=-0.930;QD=6.66;ReadPosRankSum=0.425;VQSLOD=0.6662;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:48.16:679,48,0	0/0:5,0:5:15.03:0,15,172	0/1:14,0:13:5.14:5,0,146	0/1:14,0:11:12.04:12,0,56	0/0:23,0:23:52.24:0,52,663	0/0:27,0:27:63.52:0,64,299	0/1:19,0:19:21.59:22,0,60	0/0:37,0:37:99:0,105,1105	0/0:13,0:14:26.69:0,27,107	0/0:21,0:21:59.15:0,59,688	0/0:28,0:28:78.17:0,78,918	0/0:11,0:11:26.23:0,26,130	0/1:15,0:15:13.19:59,0,13	0/1:11,0:11:18.58:19,0,23	0/0:12,0:13:38.76:0,39,429	0/0:17,0:17:42.07:0,42,496	0/0:26,0:26:66.09:0,66,740	0/0:9,0:9:26.71:0,27,287	0/0:15,0:15:42.12:0,42,500	0/0:18,0:18:47.84:0,48,550	0/0:7,0:7:21.04:0,21,234	1/1:18,0:18:18.52:118,19,0	0/0:17,0:17:42.14:0,42,223	0/0:7,0:7:13.89:0,14,64	0/0:24,0:24:62.37:0,62,698	0/0:22,0:22:66.15:0,66,744	0/0:26,0:26:69.15:0,69,779	0/0:8,0:8:21.05:0,21,246
chr10	81427702	.	G	GT	399.30	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=3.210;DP=490;FS=0.629;HRun=3;HaplotypeScore=79.5298;InbreedingCoeff=0.4776;MQ=71.99;MQ0=0;MQRankSum=0.072;QD=5.55;ReadPosRankSum=-1.131;VQSLOD=0.0477;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:7.17:247,7,0	0/0:5,0:5:15.05:0,15,208	0/1:15,0:14:6.76:7,0,217	0/1:14,0:11:31.01:31,0,82	0/0:24,0:24:62.50:0,62,861	0/0:26,0:26:52.47:0,52,585	1/1:4,15:19:1.07:227,1,0	0/0:38,0:38:99:0,105,1427	0/0:14,0:14:28.33:0,28,258	0/0:21,0:21:63.19:0,63,837	0/0:29,0:29:81.26:0,81,1105	0/0:12,0:12:32.06:0,32,285	0/0:14,0:14:24.12:0,24,307	0/0:9,0:9:25.23:0,25,224	0/0:13,0:13:38.49:0,38,510	0/0:17,0:17:48.09:0,48,635	0/0:24,0:24:66.22:0,66,914	0/0:9,0:9:27.08:0,27,355	0/0:15,0:15:42.14:0,42,587	0/0:18,0:18:54.13:0,54,715	0/0:7,0:7:21.07:0,21,292	0/0:18,0:18:45.48:0,45,353	0/0:18,0:18:50.80:0,51,467	0/0:7,0:7:14.99:0,15,144	0/0:25,0:25:63.17:0,63,853	0/0:22,0:22:66.22:0,66,914	0/0:25,0:25:69.13:0,69,957	0/0:8,0:8:21.07:0,21,293
chr10	81427703	.	G	GTTT	2535.68	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=0.123;DP=483;FS=2.190;HRun=11;HaplotypeScore=92.1073;InbreedingCoeff=0.8327;MQ=72.02;MQ0=0;MQRankSum=-1.604;QD=23.70;ReadPosRankSum=-2.777;VQSLOD=2.2346;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:23.73:0,24,149	0/0:5,0:5:12.02:0,12,129	0/0:13,0:14:19.88:0,20,160	0/1:12,0:11:6.27:6,0,63	0/0:23,0:25:53.86:0,54,631	1/1:10,13:26:66.10:1087,66,0	0/1:17,0:17:1.82:66,0,2	0/0:36,0:38:77.92:0,78,859	1/1:3,8:13:36.08:579,36,0	0/0:19,0:21:52.60:0,53,610	0/0:27,0:28:75.09:0,75,857	1/1:7,3:12:27.06:428,27,0	0/0:14,0:14:23.21:0,23,405	0/0:8,0:8:21.04:0,21,234	0/0:13,0:13:33.03:0,33,370	0/0:15,0:15:35.58:0,36,420	0/0:24,0:24:57:0,57,652	0/0:9,0:9:24.07:0,24,280	0/0:15,0:15:39.06:0,39,443	0/0:17,0:17:45.12:0,45,522	0/0:7,0:7:15.03:0,15,175	0/0:17,0:18:41.99:0,42,474	1/1:7,0:18:40.12:321,40,0	1/1:2,5:7:12.04:226,12,0	0/0:24,0:25:31.19:0,31,551	0/0:22,0:22:45.01:0,45,526	0/0:25,0:25:60.13:0,60,701	0/0:8,0:8:21.06:0,21,245
chr10	81430338	.	AT	A	12503.95	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=8.762;DP=515;FS=0.699;HRun=1;HaplotypeScore=51.8101;InbreedingCoeff=0.9945;MQ=70.82;MQ0=0;MQRankSum=-1.324;QD=37.66;ReadPosRankSum=0.473;VQSLOD=5.0366;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:36.12:503,36,0	0/0:15,0:15:45.04:0,45,660	0/0:10,0:10:27.06:0,27,375	0/0:11,0:11:32.93:0,33,461	1/1:0,31:31:78.14:1024,78,0	0/0:25,0:25:75.26:0,75,1195	0/0:12,0:12:36.12:0,36,575	1/1:0,29:29:87.26:1181,87,0	0/0:18,0:18:54.17:0,54,839	1/1:0,25:25:69.19:911,69,0	1/1:0,20:20:54.18:754,54,0	0/0:11,0:11:33.11:0,33,525	0/0:17,0:17:51.12:0,51,781	0/0:11,0:11:33.11:0,33,527	1/1:0,20:20:57.10:753,57,0	1/1:0,22:22:60.20:838,60,0	1/1:0,12:12:33.11:461,33,0	1/1:0,10:10:27.06:355,27,0	1/1:0,12:12:36.12:502,36,0	1/1:0,41:41:99:1572,114,0	1/1:0,10:10:21.07:294,21,0	0/0:23,0:23:69.18:0,69,1070	0/0:21,0:21:60.20:0,60,956	0/0:9,0:9:27.07:0,27,407	1/1:0,27:27:72.12:941,72,0	1/1:0,27:27:81.26:1116,81,0	1/1:0,27:27:81.27:1130,81,0	1/1:0,6:6:12.04:168,12,0
chr10	81430964	.	T	TAAAAA	4774.90	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=15.087;DP=612;FS=0.669;HRun=8;HaplotypeScore=164.7364;InbreedingCoeff=0.9741;MQ=76.65;MQ0=2;MQRankSum=-2.630;QD=12.43;ReadPosRankSum=-2.042;VQSLOD=0.7682;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:22:32.34:138,32,0	0/0:12,0:12:36.12:0,36,616	0/0:15,0:15:23.70:0,24,339	0/0:14,0:15:3.34:0,3,293	1/1:2,0:35:87.51:405,88,0	0/0:28,0:27:81.26:0,81,1387	0/0:11,0:11:30.07:0,30,484	1/1:14,17:33:65.95:1253,66,0	0/0:24,0:24:66.16:0,66,1099	1/1:0,0:25:68.12:315,68,0	1/1:2,0:26:65.36:283,65,0	0/0:26,0:26:78.27:0,78,1336	0/0:26,0:26:72.23:0,72,1233	0/0:18,0:18:54.17:0,54,893	1/1:3,0:32:63.30:298,63,0	1/1:1,0:24:44.25:204,44,0	1/1:0,0:15:34.82:145,35,0	1/1:2,0:9:16.07:67,16,0	1/1:4,0:16:33.24:175,33,0	1/1:6,0:34:76.04:339,76,0	1/1:2,0:16:32.14:134,32,0	0/0:22,0:22:63.18:0,63,1025	0/0:22,0:22:60.20:0,60,1001	0/0:9,0:9:24.08:0,24,411	1/1:1,0:21:48.53:216,49,0	1/1:4,0:23:55.22:275,55,0	1/1:6,0:41:89.42:418,89,0	1/1:0,0:10:26.78:111,27,0
chr10	81431506	.	AT	A	1405.26	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.955;DP=610;FS=11.913;HRun=1;HaplotypeScore=95.1386;InbreedingCoeff=0.9978;MQ=78.26;MQ0=0;MQRankSum=-3.136;QD=36.03;ReadPosRankSum=-3.563;VQSLOD=1.3662;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:39.13:544,39,0	0/0:7,0:7:21.07:0,21,335	0/0:20,0:20:60.20:0,60,955	0/0:13,0:13:36.03:0,36,508	0/0:30,0:30:90.28:0,90,1389	0/0:22,0:22:66.19:0,66,1006	0/0:14,0:14:39.12:0,39,598	1/1:0,26:26:75.21:983,75,0	0/0:17,0:17:51.16:0,51,783	0/0:16,0:16:48.16:0,48,752	0/0:20,0:20:60.19:0,60,934	0/0:20,0:20:60.20:0,60,947	0/0:26,0:26:78.25:0,78,1201	0/0:21,0:21:60.05:0,60,901	0/0:28,0:28:84.22:0,84,1242	0/0:26,0:26:78.27:0,78,1246	0/0:19,0:19:57.13:0,57,832	0/0:26,0:26:78.23:0,78,1201	0/0:20,0:20:57.18:0,57,869	0/0:22,0:22:66.21:0,66,1031	0/0:22,0:22:66.14:0,66,951	0/0:25,0:25:72.23:0,72,1127	0/0:27,0:27:81.28:0,81,1286	0/0:14,0:14:42.14:0,42,670	0/0:36,0:36:99:0,108,1653	0/0:27,0:27:81.28:0,81,1294	0/0:37,0:36:99:0,111,1741	0/0:16,0:16:45.15:0,45,718
chr10	81431565	.	ATGTG	A	2892.10	PASS	AB=0.848;AC=31;AF=0.596;AN=52;BaseQRankSum=4.616;DP=624;FS=3.310;HRun=0;HaplotypeScore=151.0911;InbreedingCoeff=0.6477;MQ=61.37;MQ0=9;MQRankSum=-5.389;QD=8.06;ReadPosRankSum=0.822;VQSLOD=2.8423;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:14.77:0,15,240	0/0:10,0:11:19.87:0,20,433	./.	0/0:36,0:17:0:0,0,0	1/1:15,8:26:11.96:228,12,0	0/0:19,0:31:20.81:0,21,377	1/1:14,0:18:11.85:98,12,0	0/0:31,0:31:16.70:0,17,162	0/0:14,0:21:23.79:0,24,401	1/1:12,4:16:15.05:233,15,0	1/1:9,7:16:21.07:315,21,0	0/0:20,0:19:15.05:0,15,284	1/1:22,0:27:12.01:112,12,0	1/1:11,0:17:12.01:112,12,0	0/1:20,2:31:35.79:78,0,36	1/1:15,3:20:14.87:195,15,0	0/1:14,3:17:8.59:128,0,9	0/1:21,0:21:14.62:15,0,63	./.	1/1:13,12:26:33.10:494,33,0	1/1:14,1:15:2.85:47,3,0	1/1:12,0:22:21.02:194,21,0	0/0:16,0:23:20.53:0,21,412	0/0:12,0:18:18.06:0,18,354	1/1:20,8:27:23.87:313,24,0	1/1:16,5:22:24.06:335,24,0	1/1:24,3:27:9.03:140,9,0	1/1:7,1:8:3.48:47,3,0
chr10	81432037	.	GCTCTCTCTCTCTCT	G	1479.65	PASS	AB=0.900;AC=9;AF=0.173;AN=52;BaseQRankSum=3.586;DP=493;FS=1.741;HRun=0;HaplotypeScore=203.0478;InbreedingCoeff=0.6552;MQ=71.93;MQ0=13;MQRankSum=-2.822;QD=18.50;ReadPosRankSum=2.091;VQSLOD=2.8329;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:9.03:0,9,172	0/0:7,0:7:9.03:0,9,146	0/0:31,0:24:8.99:0,9,95	0/0:41,0:25:0:0,0,1	./.	1/1:20,0:21:19.07:453,19,0	0/0:12,0:12:24.08:0,24,606	0/0:35,0:32:19.78:0,20,206	1/1:10,1:11:17.99:263,18,0	0/0:24,0:24:24.08:0,24,517	0/0:10,0:10:2.98:0,3,22	1/1:10,4:15:16.60:399,17,0	0/0:28,0:27:36.77:0,37,1032	0/0:18,0:18:25.77:0,26,766	./.	0/0:18,0:18:5.79:0,6,76	0/0:10,0:10:12:0,12,245	0/0:10,0:10:11.99:0,12,218	0/0:19,0:19:22.89:0,23,434	0/0:10,0:10:6.02:0,6,105	0/0:12,0:12:3.01:0,3,61	0/0:23,0:23:27.08:0,27,843	0/1:8,1:9:5.64:148,0,6	1/1:22,1:23:19.59:370,20,0	0/0:14,0:14:12.02:0,12,156	0/0:14,0:14:6.02:0,6,98	0/0:20,0:20:33.01:0,33,485	0/0:11,0:9:6:0,6,67
chr10	81432039	.	T	TCG	5557.26	PASS	AB=0.978;AC=45;AF=0.804;AN=56;BaseQRankSum=-2.629;DP=498;FS=3.889;HRun=0;HaplotypeScore=103.0491;InbreedingCoeff=0.6394;MQ=69.69;MQ0=15;MQRankSum=-3.231;QD=13.86;ReadPosRankSum=4.323;VQSLOD=4.6439;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:17.18:0,17,117	0/0:8,0:8:20.97:0,21,175	0/0:31,0:23:43.78:0,44,507	0/0:40,0:24:60.14:0,60,568	1/1:17,0:15:17.86:129,18,0	1/1:20,0:20:58.20:382,58,0	1/1:12,2:14:8.33:299,8,0	1/1:37,0:34:59.23:492,59,0	1/1:11,0:11:32.55:231,33,0	1/1:21,0:21:57.37:407,57,0	1/1:10,0:10:17.60:112,18,0	1/1:14,0:14:29.94:199,30,0	0/1:27,2:28:23.55:310,0,24	0/1:21,0:21:20.98:257,0,21	1/1:12,0:11:20.79:158,21,0	1/1:18,0:18:32.78:243,33,0	1/1:10,0:10:22.28:162,22,0	1/1:10,0:10:29.34:184,29,0	1/1:19,0:19:36.25:310,36,0	1/1:10,0:10:20.50:129,20,0	1/1:12,0:12:17.84:137,18,0	0/1:23,0:23:25.05:157,0,25	1/1:9,0:9:23.68:174,24,0	1/1:24,0:23:37.33:231,37,0	1/1:14,0:14:26.60:184,27,0	1/1:3,11:14:32.06:218,32,0	1/1:20,0:20:34.69:262,35,0	1/1:12,0:9:26.76:191,27,0
chr10	81432100	.	CTCTCGCTT	C	1042.41	PASS	AB=0.847;AC=21;AF=0.477;AN=44;BaseQRankSum=1.632;DP=426;FS=12.953;HRun=0;HaplotypeScore=136.4285;InbreedingCoeff=0.4782;MQ=77.20;MQ0=14;MQRankSum=-0.570;QD=7.50;ReadPosRankSum=-0.110;VQSLOD=1.9535;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:0.75:0,1,2	0/0:7,0:7:20.94:0,21,363	0/0:62,0:24:19.08:0,19,320	0/0:93,0:35:23.10:0,23,389	./.	1/1:5,18:23:6.16:82,6,0	0/0:19,0:19:41.99:0,42,782	0/1:15,0:15:3.51:20,0,4	1/1:2,15:17:3.99:91,4,0	0/1:4,0:4:3.85:22,0,4	./.	1/1:19,1:20:37.51:769,38,0	0/0:26,0:25:65.97:0,66,1324	0/0:25,0:25:62.93:0,63,1311	1/1:2,0:2:2.22:7,2,0	1/1:5,0:5:1.13:2,1,0	0/0:3,0:3:2.51:0,3,7	1/1:2,0:2:0.89:2,1,0	1/1:1,0:1:2.37:8,2,0	./.	./.	0/0:23,0:23:21.91:0,22,752	0/1:2,11:13:33.26:39,0,33	1/1:10,23:33:2.21:25,2,0	0/0:6,0:6:0:0,0,0	./.	./.	1/1:4,0:3:9.03:114,9,0
chr10	81432104	.	CGCTT	C	797.63	PASS	AB=0.992;AC=18;AF=0.409;AN=44;BaseQRankSum=4.431;DP=407;FS=1.421;HRun=0;HaplotypeScore=117.3551;InbreedingCoeff=0.3523;MQ=76.86;MQ0=10;MQRankSum=-2.109;QD=4.27;ReadPosRankSum=-0.537;VQSLOD=2.4445;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:10:0.09:0,0,0	0/0:8,0:8:23.97:0,24,486	0/0:59,0:21:30.65:0,31,435	0/1:88,0:36:8.49:8,0,563	./.	0/1:20,0:20:6.27:6,0,58	0/0:18,0:18:42.13:0,42,1017	1/1:4,7:11:11.63:431,12,0	0/1:16,0:16:25.20:25,0,30	1/1:5,0:5:10.41:47,10,0	./.	0/1:19,1:20:55.08:178,0,55	0/0:24,0:23:65.84:0,66,1402	0/0:24,0:24:62.94:0,63,1504	0/0:2,0:2:1.82:0,2,5	1/1:6,0:6:6.37:38,6,0	1/1:3,0:3:2.88:15,3,0	0/1:3,0:3:5.77:52,0,6	1/1:1,0:1:2.97:20,3,0	./.	./.	0/0:25,0:25:28.49:0,28,913	0/0:13,0:13:6.17:0,6,87	0/0:29,0:29:6.99:0,7,68	0/0:7,0:7:0:0,0,0	./.	./.	1/1:4,0:3:9.03:122,9,0
chr10	81432123	.	T	TCACACACACACACA	2705.82	PASS	AB=1.000;AC=25;AF=0.463;AN=54;BaseQRankSum=3.735;DP=417;FS=3.417;HRun=0;HaplotypeScore=156.3724;InbreedingCoeff=0.5916;MQ=74.35;MQ0=9;MQRankSum=-4.676;QD=30.75;ReadPosRankSum=-3.559;VQSLOD=2.5017;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:2.59:58,3,0	0/0:8,0:8:20.56:0,21,840	0/0:53,0:15:15.12:0,15,301	0/0:61,0:29:31.58:0,32,626	0/1:1,0:1:0:0,0,0	0/0:27,0:27:32.96:0,33,889	0/0:17,0:17:39.12:0,39,1476	1/1:25,0:25:6.54:159,7,0	0/0:18,0:18:12.51:0,13,338	0/1:5,0:5:4.71:604,0,5	./.	0/0:16,0:17:39.13:0,39,1358	0/0:24,0:23:57.20:0,57,2192	0/0:24,0:24:60.21:0,60,2369	1/1:4,0:4:7.08:92,7,0	1/1:1,5:7:6.75:387,7,0	1/1:3,0:3:3.01:177,3,0	0/1:3,0:3:12.65:150,0,13	1/1:2,0:2:3.48:174,3,0	1/1:6,0:6:2.04:6,2,0	1/1:3,0:3:2.04:6,2,0	0/0:23,0:23:49.98:0,50,1776	0/0:15,0:15:12.04:0,12,360	0/0:28,0:28:9.49:0,9,389	0/0:10,0:10:2.88:0,3,15	1/1:2,0:2:6.02:377,6,0	1/1:7,0:6:3.01:194,3,0	1/1:7,0:6:15.05:498,15,0
chr10	81432125	.	T	TCACACACACACACACA	3874.06	PASS	AB=0.900;AC=24;AF=0.480;AN=50;BaseQRankSum=2.082;DP=420;FS=0.000;HRun=0;HaplotypeScore=166.3492;InbreedingCoeff=0.7020;MQ=71.66;MQ0=8;MQRankSum=-2.559;QD=41.21;ReadPosRankSum=-4.207;VQSLOD=2.1439;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:5.43:101,5,0	0/0:8,0:8:20.54:0,21,872	0/0:50,0:15:19.31:0,19,277	0/0:57,0:26:8.93:0,9,592	1/1:3,0:3:2.99:24,3,0	0/0:27,0:27:33.10:0,33,1074	0/0:18,0:18:42.12:0,42,1645	1/1:25,0:25:41.59:508,42,0	0/0:18,0:18:12.51:0,13,390	1/1:0,4:7:16.31:795,16,0	./.	0/0:18,0:18:39.13:0,39,1537	0/0:25,0:24:61.97:0,62,2357	0/0:24,0:24:63.16:0,63,2474	1/1:4,0:4:3.01:113,3,0	1/1:7,0:7:6.82:422,7,0	1/1:0,3:3:3.01:214,3,0	0/1:3,1:4:6.37:182,0,6	1/1:2,0:2:6.01:240,6,0	./.	./.	0/0:23,0:23:49.96:0,50,1923	0/0:15,0:15:12.04:0,12,433	0/0:30,0:30:9.22:0,9,422	0/1:10,0:10:0:0,0,0	1/1:2,0:2:6.02:433,6,0	1/1:7,0:6:3.01:218,3,0	1/1:7,0:6:15.05:623,15,0
chr10	81432127	.	T	TCACACACACACACACACA	9752.13	PASS	AC=28;AF=0.538;AN=52;BaseQRankSum=-3.237;DP=493;FS=4.780;HRun=0;HaplotypeScore=214.9297;InbreedingCoeff=0.8447;MQ=64.94;MQ0=8;MQRankSum=-7.487;QD=56.70;ReadPosRankSum=-4.825;VQSLOD=3.0888;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:16:5.54:145,6,0	0/0:9,0:9:23.40:0,23,926	0/0:48,0:13:12:0,12,267	0/0:55,0:25:13.10:0,13,528	1/1:6,0:6:9:96,9,0	0/0:26,0:26:33.11:0,33,1235	0/0:18,0:18:42.13:0,42,1775	1/1:28,0:28:67.83:1140,68,0	0/0:17,0:17:12.51:0,13,405	1/1:14,0:14:39.13:1952,39,0	./.	0/0:17,0:18:41.92:0,42,1632	0/0:24,0:24:63.15:0,63,2530	0/0:24,0:24:57.19:0,57,2462	1/1:3,4:10:3.01:132,3,0	1/1:13,0:13:15.47:949,15,0	1/1:6,0:6:9.03:508,9,0	1/1:7,0:7:10.69:656,11,0	1/1:4,0:4:11.95:346,12,0	1/1:8,3:12:3.01:95,3,0	./.	0/0:24,0:24:42.14:0,42,2002	0/0:15,0:15:12.51:0,13,494	0/0:30,0:30:15.82:0,16,455	1/1:6,7:18:0.29:17,0,0	1/1:10,2:12:36.12:1987,36,0	1/1:10,4:15:18.02:720,18,0	1/1:10,0:9:21.06:1010,21,0
chr10	81432172	.	AT	A	783.35	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.070;DP=569;FS=1.395;HRun=9;HaplotypeScore=103.6405;InbreedingCoeff=0.9641;MQ=70.17;MQ0=1;MQRankSum=0.780;QD=16.32;ReadPosRankSum=-1.313;VQSLOD=3.2923;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,11:15:32.70:301,33,0	0/0:11,0:11:30.09:0,30,346	0/0:18,0:15:24.03:0,24,252	0/0:16,0:14:8.41:0,8,157	0/0:15,0:15:42.12:0,42,479	0/0:30,0:30:69.21:0,69,796	0/0:16,0:16:42.12:0,42,485	1/1:10,23:33:66.03:604,66,0	0/0:23,0:23:54.16:0,54,618	0/0:26,0:26:69.21:0,69,796	0/0:13,0:13:38.14:0,38,421	0/0:14,0:14:30.08:0,30,338	0/0:22,0:23:63.04:0,63,698	0/0:27,0:27:66.19:0,66,759	0/0:26,0:26:58.19:0,58,620	0/0:28,0:28:72.05:0,72,830	0/0:12,0:12:27.05:0,27,298	0/0:14,0:14:36.11:0,36,415	0/0:18,0:18:48.14:0,48,554	0/0:20,0:20:59.21:0,59,664	0/0:12,0:12:27.04:0,27,297	0/0:23,0:23:63.19:0,63,727	0/0:21,0:21:57.17:0,57,658	0/0:24,0:24:39.12:0,39,450	0/0:17,0:17:36.11:0,36,415	0/0:34,0:34:93.28:0,93,1073	0/0:27,0:27:69.21:0,69,796	0/0:13,0:13:36.11:0,36,415
chr10	81433219	.	A	AGGAC	39696.46	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-9.168;DP=648;FS=0.536;HRun=0;HaplotypeScore=93.6068;InbreedingCoeff=0.9786;MQ=81.67;MQ0=0;MQRankSum=-10.024;QD=66.94;ReadPosRankSum=6.132;VQSLOD=6.9253;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,40:49:99:3407,126,0	0/0:10,0:10:27.09:0,27,523	0/0:25,0:25:65.36:0,65,1200	0/0:20,0:20:57.15:0,57,1010	1/1:1,29:31:69.24:1851,69,0	1/1:3,19:22:54.19:1474,54,0	1/1:2,14:16:33.11:901,33,0	1/1:10,11:21:54.18:1391,54,0	1/1:5,21:27:57.20:1506,57,0	1/1:2,25:27:78.13:2056,78,0	1/1:2,16:19:42.14:1145,42,0	1/1:7,26:34:90.31:2365,90,0	1/1:2,24:28:66.23:1788,66,0	1/1:1,26:27:78.27:2123,78,0	1/1:3,27:32:81.28:2168,81,0	1/1:2,25:29:75.26:2028,75,0	1/1:3,19:24:57.20:1559,57,0	1/1:0,9:11:27.09:731,27,0	1/1:11,16:28:75.19:1857,75,0	1/1:3,29:35:87.29:2338,87,0	1/1:3,18:21:45.15:1229,45,0	1/1:1,14:16:39.13:1064,39,0	1/1:2,20:22:54.13:1471,54,0	1/1:1,11:13:30.10:821,30,0	1/1:1,19:21:50.99:1393,51,0	1/1:3,15:18:51.18:1393,51,0	1/1:0,17:17:51.18:1392,51,0	1/1:1,4:5:9.03:246,9,0
chr10	81435456	.	G	GA	957.24	PASS	AC=10;AF=0.200;AN=50;BaseQRankSum=-1.111;DP=385;FS=2.963;HRun=2;HaplotypeScore=49.9756;InbreedingCoeff=0.9144;MQ=29.21;MQ0=89;MQRankSum=-1.743;QD=18.77;ReadPosRankSum=-0.563;VQSLOD=3.4308;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:7:15.05:0,15,182	0/0:7,0:7:18.06:0,18,221	./.	./.	0/0:13,0:13:23.95:0,24,288	1/1:2,12:13:30.10:422,30,0	0/0:16,0:7:12:0,12,131	./.	1/1:1,6:6:15.05:208,15,0	0/0:11,0:10:27.08:0,27,334	0/0:12,0:10:27.08:0,27,322	1/1:2,13:13:18.06:258,18,0	0/0:21,0:12:26.92:0,27,332	0/0:16,0:11:24.06:0,24,284	0/0:13,0:9:27.08:0,27,327	0/0:23,0:18:51.16:0,51,629	0/0:29,0:13:36.10:0,36,431	0/0:21,0:11:18.06:0,18,222	0/0:16,0:6:17.71:0,18,182	0/0:19,0:17:42.13:0,42,518	0/0:30,0:7:9.02:0,9,101	0/0:14,0:12:30.05:0,30,349	1/1:0,9:9:12:144,12,0	1/1:4,2:3:6.02:86,6,0	0/0:9,0:9:27.08:0,27,333	0/0:19,0:16:42.10:0,42,503	0/0:15,0:11:24.07:0,24,288	0/0:4,0:3:9.03:0,9,107
chr10	81435644	.	T	TA	1937.51	PASS	AB=0.843;AC=35;AF=0.625;AN=56;BaseQRankSum=-1.200;DP=451;FS=0.709;HRun=15;HaplotypeScore=67.1852;InbreedingCoeff=0.4101;MQ=48.84;MQ0=20;MQRankSum=0.068;QD=5.73;ReadPosRankSum=0.168;VQSLOD=2.3968;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:30:30.49:0,30,88	0/0:3,0:8:6.93:0,7,21	0/1:10,0:5:5.46:5,0,30	0/0:5,0:4:2.01:0,2,16	1/1:17,6:24:9.68:174,10,0	1/1:11,0:11:19.01:82,19,0	0/0:20,0:17:28.62:0,29,168	0/0:9,0:22:17.97:0,18,54	1/1:7,0:6:5.42:23,5,0	0/1:15,3:14:23.95:59,0,24	0/1:10,10:21:23.52:93,0,24	1/1:10,0:10:21.71:92,22,0	0/1:16,1:15:40.33:40,0,51	0/0:14,0:15:0.18:0,0,60	1/1:10,5:12:13.05:127,13,0	1/1:4,8:10:16.87:140,17,0	1/1:20,6:24:16.61:200,17,0	1/1:8,10:14:11.21:83,11,0	0/1:20,2:21:0.80:70,0,1	1/1:22,2:24:29.24:191,29,0	1/1:6,1:5:3:25,3,0	0/0:8,0:8:13.36:0,13,76	1/1:13,0:10:18.75:76,19,0	1/1:18,0:16:29.66:123,30,0	0/1:10,8:18:2.71:76,0,3	0/1:9,2:11:1.30:82,0,1	1/1:10,3:9:12.42:97,12,0	1/1:10,9:15:32.71:257,33,0
chr10	81435655	.	A	AAG	1371.70	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-5.532;DP=446;FS=1.482;HRun=0;HaplotypeScore=71.3533;InbreedingCoeff=0.9069;MQ=53.01;MQ0=17;MQRankSum=3.987;QD=20.47;ReadPosRankSum=5.931;VQSLOD=3.5266;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:29:59.30:0,59,414	0/0:11,0:11:20.95:0,21,175	0/0:13,0:6:8.95:0,9,130	0/0:8,0:6:5.94:0,6,83	0/0:26,0:26:49.83:0,50,387	1/1:2,9:13:21.01:295,21,0	0/0:20,0:17:36.03:0,36,430	0/0:13,0:13:35.62:0,36,253	1/1:0,5:6:6.02:91,6,0	0/0:15,0:13:34.82:0,35,264	0/0:22,0:22:35.92:0,36,314	1/1:0,13:14:23.77:335,24,0	0/0:17,0:17:33.61:0,34,313	0/0:16,0:16:36.77:0,37,362	0/0:11,0:10:15.26:0,15,123	0/0:12,0:10:23.46:0,23,149	0/0:24,0:22:35.48:0,35,257	0/0:17,0:14:11.69:0,12,70	0/0:17,0:17:46.33:0,46,343	0/0:25,0:25:25.47:0,25,265	0/0:8,0:7:12.23:0,12,81	0/0:9,0:9:26.45:0,26,256	1/1:1,12:10:21.07:326,21,0	1/1:4,16:19:18.13:492,18,0	0/0:17,0:16:12.33:0,12,153	0/0:14,0:14:35.31:0,35,261	0/0:13,0:9:22.25:0,22,140	0/0:18,0:14:26.68:0,27,195
chr10	81436180	.	TGTGCGTGC	T	3940.71	PASS	AB=0.847;AC=35;AF=0.648;AN=54;BaseQRankSum=-5.402;DP=537;FS=1.573;HRun=0;HaplotypeScore=150.0492;InbreedingCoeff=0.6214;MQ=58.62;MQ0=5;MQRankSum=-7.165;QD=11.69;ReadPosRankSum=1.311;VQSLOD=2.9198;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:27.56:0,28,744	0/0:4,0:4:6.01:0,6,148	./.	0/1:28,0:20:0:0,0,0	0/1:16,1:17:0:0,0,0	1/1:7,7:14:12.04:300,12,0	0/0:20,0:39:32.45:0,32,287	0/0:21,0:20:6.01:0,6,74	1/1:11,6:17:12.04:300,12,0	1/1:8,7:14:18.06:415,18,0	0/1:12,2:14:0:0,0,0	1/1:10,14:24:15.05:375,15,0	0/1:11,0:24:46.90:47,0,168	0/0:19,0:35:41.93:0,42,390	1/1:2,12:14:5.93:150,6,0	1/1:12,5:17:9.03:225,9,0	1/1:9,8:17:6.02:150,6,0	1/1:14,10:24:12.04:300,12,0	1/1:13,3:15:9:225,9,0	1/1:5,3:8:6.02:150,6,0	0/0:28,13:39:0.47:0,0,1	0/0:12,0:17:11.97:0,12,114	0/1:9,4:13:0.17:0,0,0	1/1:9,11:20:6.02:150,6,0	1/1:10,7:17:12.03:300,12,0	1/1:11,3:12:9.03:176,9,0	1/1:5,8:13:11.98:300,12,0	1/1:3,8:11:15.05:374,15,0
chr10	81438301	.	GTAAGAAGTAATA	G	25635.11	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=14.790;DP=630;FS=4.431;HRun=0;HaplotypeScore=244.5121;InbreedingCoeff=0.9366;MQ=77.90;MQ0=0;MQRankSum=-13.870;QD=55.97;ReadPosRankSum=3.462;VQSLOD=4.4895;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,9:12:12.04:400,12,0	0/0:15,0:15:42.14:0,42,2490	0/0:22,0:22:48.16:0,48,1845	0/0:17,0:17:39.11:0,39,1714	1/1:7,32:39:68.87:1584,69,0	1/1:2,19:21:36.12:1231,36,0	0/0:18,0:18:48.15:0,48,2633	0/0:35,0:35:93.29:0,93,3088	1/1:4,22:26:48.16:1744,48,0	1/1:8,17:25:44.56:1282,45,0	1/1:6,23:29:51.09:1665,51,0	1/1:2,20:22:42.14:1495,42,0	0/0:28,0:28:72.25:0,72,4025	0/0:20,0:20:57.18:0,57,3268	1/1:5,23:28:54.19:1910,54,0	1/1:1,17:18:33.11:1208,33,0	1/1:0,3:3:6.02:220,6,0	1/1:0,6:6:12.04:429,12,0	1/1:4,23:27:69.11:1630,69,0	1/1:7,30:37:81.10:2444,81,0	1/1:5,11:16:5.95:148,6,0	0/0:17,0:17:51.15:0,51,2774	1/1:3,26:29:53.75:1830,54,0	1/1:4,6:10:9.03:329,9,0	1/1:5,21:26:39.13:1416,39,0	1/1:6,33:39:96.06:2710,96,0	1/1:8,25:33:47.82:1632,48,0	1/1:2,10:12:9.03:327,9,0
chr10	81438981	.	CGTGTGT	C	2466.97	PASS	AB=0.690;AC=40;AF=0.769;AN=52;BaseQRankSum=1.199;DP=293;FS=12.018;HRun=0;HaplotypeScore=75.7279;InbreedingCoeff=0.3628;MQ=66.57;MQ0=10;MQRankSum=-0.529;QD=13.48;ReadPosRankSum=4.242;VQSLOD=1.2060;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:4:6.02:0,6,149	0/0:26,0:14:9.03:0,9,231	0/0:20,0:9:5.88:0,6,52	1/1:5,5:10:6.91:126,7,0	1/1:6,0:9:6.02:84,6,0	1/1:5,0:10:15.05:212,15,0	0/0:33,0:33:27.09:0,27,495	1/1:6,0:9:6.02:84,6,0	1/1:5,2:7:3:62,3,0	1/1:5,1:6:2.98:62,3,0	1/1:8,0:9:3.01:41,3,0	1/1:6,0:13:21.07:295,21,0	1/1:2,0:8:9.03:126,9,0	0/1:6,2:10:34.44:96,0,34	0/1:5,5:10:80.22:293,0,80	1/1:3,3:6:6.02:124,6,0	0/0:7,0:8:3.01:0,3,83	1/1:4,3:7:9.01:184,9,0	1/1:4,3:7:6.02:124,6,0	./.	1/1:5,0:6:5.91:84,6,0	1/1:8,0:12:3.01:43,3,0	1/1:3,0:6:3.01:42,3,0	1/1:3,5:10:12.93:230,13,0	1/1:6,2:8:3.64:120,4,0	1/1:8,4:12:6.02:124,6,0	1/1:6,1:7:3.01:62,3,0
chr10	81439015	.	TAC	T	544.57	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-2.164;DP=179;FS=19.656;HRun=0;HaplotypeScore=47.2575;InbreedingCoeff=0.3957;MQ=44.38;MQ0=12;MQRankSum=-1.424;QD=19.45;ReadPosRankSum=1.247;VQSLOD=1.9437;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:3,0:3:0:0,0,0	1/1:0,1:1:2.98:22,3,0	0/0:20,0:3:6.02:0,6,116	0/0:14,0:3:3.83:0,4,13	0/0:8,0:8:11.93:0,12,136	0/0:4,0:4:5.91:0,6,38	0/0:6,1:7:15.91:0,16,100	1/1:2,18:19:51.08:627,51,0	0/0:3,0:3:5.91:0,6,37	0/0:4,0:4:9.02:0,9,126	0/0:1,0:1:2.94:0,3,18	0/0:2,0:2:2.22:0,2,7	0/0:10,0:10:4.24:0,4,103	0/0:7,0:8:8.92:0,9,63	0/0:6,0:6:11.97:0,12,127	0/0:7,0:7:17.91:0,18,133	0/0:4,0:4:5.97:0,6,44	0/0:5,0:3:5.93:0,6,58	0/0:9,1:10:15.04:0,15,346	0/0:3,0:3:5.97:0,6,43	1/1:4,0:4:0.47:1,0,0	0/0:3,0:2:5.93:0,6,41	0/0:5,0:5:2.87:0,3,15	0/0:3,0:3:2.84:0,3,14	0/0:8,0:8:14.92:0,15,122	0/0:5,0:5:14.92:0,15,147	0/0:6,0:5:8.96:0,9,68	0/0:5,0:5:9.01:0,9,92
chr10	81440037	.	C	CA	14252.06	PASS	AB=0.909;AC=43;AF=0.768;AN=56;BaseQRankSum=-11.546;DP=613;FS=5.561;HRun=8;HaplotypeScore=57.9444;InbreedingCoeff=0.9173;MQ=78.81;MQ0=0;MQRankSum=-2.911;QD=27.46;ReadPosRankSum=0.434;VQSLOD=5.5024;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:33:69.16:781,69,0	0/1:7,1:10:6.53:7,0,176	0/0:17,0:16:20.95:0,21,179	0/0:13,0:13:26.88:0,27,223	1/1:4,27:31:81.20:920,81,0	1/1:4,26:31:50.60:818,51,0	0/0:11,0:11:30.01:0,30,275	1/1:3,27:31:84.06:929,84,0	1/1:0,9:9:27.08:312,27,0	1/1:5,11:16:33.08:369,33,0	1/1:4,26:30:72.17:816,72,0	1/1:2,17:19:51.15:589,51,0	0/0:16,0:16:45:0,45,406	0/0:17,0:17:42.02:0,42,384	1/1:2,12:14:36.10:411,36,0	1/1:1,17:18:42.12:485,42,0	1/1:1,29:30:84.25:969,84,0	1/1:3,15:18:42.12:485,42,0	1/1:4,15:19:45.13:519,45,0	1/1:7,36:43:99:1231,108,0	1/1:0,20:20:57.17:658,57,0	0/0:19,0:20:50.05:0,50,445	1/1:7,31:38:61.02:676,61,0	1/1:0,13:12:30.09:346,30,0	1/1:1,23:24:69.21:796,69,0	1/1:3,21:25:66.01:730,66,0	1/1:2,27:28:81.21:921,81,0	1/1:3,15:18:42.12:485,42,0
chr10	81440419	.	GGA	G	287.88	PASS	AB=0.917;AC=5;AF=0.096;AN=52;BaseQRankSum=2.164;DP=658;FS=2.049;HRun=0;HaplotypeScore=135.0583;InbreedingCoeff=0.1701;MQ=73.11;MQ0=12;MQRankSum=0.106;QD=2.91;ReadPosRankSum=0.944;VQSLOD=2.7668;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:0:0,0,0	0/0:11,0:11:12.03:0,12,159	./.	./.	0/0:23,0:23:16.08:0,16,112	1/1:21,4:25:16.45:182,16,0	0/0:24,0:22:5.65:0,6,48	0/1:33,0:31:23.84:24,0,38	0/1:15,5:20:25.55:147,0,26	0/0:26,0:26:20.74:0,21,276	0/0:18,0:17:1.92:0,2,42	0/0:26,0:25:23.45:0,23,323	0/0:17,0:18:9.72:0,10,48	0/0:17,0:16:4.99:0,5,25	0/0:27,0:45:8.67:0,9,88	0/0:15,0:15:2.82:0,3,26	0/0:20,0:17:1.03:0,1,82	0/0:10,0:11:12.37:0,12,110	0/0:27,0:26:16.27:0,16,158	0/0:25,0:25:24.66:0,25,222	0/0:19,0:17:9.44:0,9,87	0/0:26,0:25:5.58:0,6,47	0/1:19,1:20:51.59:52,0,76	0/0:20,1:20:15.02:0,15,196	0/0:26,0:26:11.48:0,11,87	0/0:27,0:27:42.86:0,43,426	0/0:39,0:39:33.99:0,34,278	0/0:15,0:12:7.52:0,8,48
chr10	81440456	.	G	GAGAGAGAGAC	8794.91	PASS	AB=0.914;AC=45;AF=0.804;AN=56;BaseQRankSum=0.402;DP=813;FS=4.816;HRun=0;HaplotypeScore=231.3091;InbreedingCoeff=0.3959;MQ=51.38;MQ0=22;MQRankSum=0.435;QD=12.73;ReadPosRankSum=3.181;VQSLOD=3.6293;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:21:32.70:250,33,0	0/0:9,0:9:21.01:0,21,259	0/0:42,0:16:28.46:0,28,258	0/0:70,0:24:34.64:0,35,307	1/1:35,0:34:53.59:619,54,0	1/1:21,0:44:30.05:481,30,0	1/1:21,0:19:29.77:269,30,0	1/1:34,0:32:77.27:602,77,0	1/1:16,0:31:22.89:476,23,0	1/1:29,0:29:66.61:554,67,0	1/1:27,0:26:38.95:340,39,0	0/1:22,0:21:99:142,0,218	1/1:19,0:19:38.59:351,39,0	1/1:25,0:23:34.02:282,34,0	0/1:39,0:39:99:105,0,272	1/1:4,1:19:3.01:138,3,0	1/1:27,0:24:11.86:382,12,0	0/1:15,0:15:30.57:169,0,31	1/1:18,0:17:35.54:440,36,0	1/1:35,0:34:41.02:579,41,0	1/1:32,0:30:47.34:398,47,0	1/1:24,0:23:20.93:201,21,0	0/1:10,0:28:58.56:116,0,59	0/1:25,0:25:90.04:97,0,90	1/1:25,0:25:40.25:389,40,0	1/1:39,0:39:90.73:753,91,0	1/1:34,0:34:9.78:451,10,0	1/1:18,0:15:22.24:211,22,0
chr10	81440473	.	A	AC	270.29	PASS	AB=0.862;AC=7;AF=0.125;AN=56;BaseQRankSum=7.780;DP=703;FS=33.961;HRun=0;HaplotypeScore=147.1209;InbreedingCoeff=-0.1505;MQ=59.49;MQ0=15;MQRankSum=-4.870;QD=1.77;ReadPosRankSum=-2.413;VQSLOD=1.2365;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:17:35.77:0,36,447	0/0:9,0:9:27.09:0,27,377	0/0:58,0:33:75.01:0,75,963	0/0:83,0:36:85.88:0,86,1091	0/0:28,2:30:69.11:0,69,950	0/1:30,4:34:99:109,0,219	0/0:12,0:12:30.10:0,30,412	0/0:26,0:26:75.25:0,75,1045	0/1:17,9:25:99:156,0,101	0/0:20,0:20:48.98:0,49,748	0/0:22,2:23:21.10:0,21,631	0/0:16,1:17:5.08:0,5,373	0/1:13,2:16:30.84:31,0,452	0/0:16,3:21:26.64:0,27,569	0/0:26,0:26:60.07:0,60,790	0/0:15,2:17:7.82:0,8,72	0/1:19,1:21:6:6,0,512	0/1:11,0:13:61.70:62,0,278	0/0:20,0:19:41.03:0,41,644	0/1:19,1:21:12.90:13,0,478	0/0:25,2:27:24.09:0,24,773	0/0:21,1:21:53.23:0,53,591	0/1:18,3:21:20.14:20,0,154	0/0:20,2:21:6.79:0,7,291	0/0:14,0:17:21.40:0,21,465	0/0:29,0:30:27.26:0,27,1004	0/0:20,2:26:21.36:0,21,714	0/0:16,0:14:26.96:0,27,350
chr10	81440483	.	GGC	G	186.52	PASS	AB=0.855;AC=3;AF=0.054;AN=56;BaseQRankSum=6.618;DP=675;FS=7.552;HRun=0;HaplotypeScore=150.8976;InbreedingCoeff=-0.0609;MQ=66.49;MQ0=3;MQRankSum=-4.456;QD=2.33;ReadPosRankSum=-3.022;VQSLOD=1.5312;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:29.96:0,30,598	0/0:8,0:8:24.08:0,24,470	0/0:51,0:38:67.95:0,68,1739	0/0:67,2:38:48.48:0,48,1243	0/0:24,0:24:72.25:0,72,1463	0/1:27,6:33:99:119,0,335	0/0:13,0:11:33.11:0,33,644	0/0:33,0:33:99:0,99,1990	0/1:18,8:24:99:143,0,196	0/0:25,0:25:75.26:0,75,1501	0/0:27,0:26:72.23:0,72,1402	0/0:18,2:19:46.04:0,46,912	0/0:17,2:19:6.67:0,7,859	0/0:19,3:22:28.30:0,28,1110	0/0:29,0:29:66.20:0,66,1334	0/0:17,0:17:15.05:0,15,303	0/0:16,0:16:42.14:0,42,853	0/0:12,1:13:32.32:0,32,584	0/0:20,0:20:60.21:0,60,1205	0/0:18,0:18:51.18:0,51,1034	0/0:25,0:25:69.16:0,69,1400	0/0:23,1:23:53.99:0,54,1096	0/1:20,1:21:24.69:25,0,400	0/0:23,1:24:41.50:0,42,836	0/0:16,0:16:48.16:0,48,959	0/0:31,0:31:93.32:0,93,1883	0/0:22,0:22:57.13:0,57,1099	0/0:12,0:11:27.09:0,27,548
chr10	81441830	.	TA	T	4236.97	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.047;DP=526;FS=7.040;HRun=10;HaplotypeScore=63.7537;InbreedingCoeff=0.9641;MQ=70.29;MQ0=0;MQRankSum=0.148;QD=20.87;ReadPosRankSum=0.635;VQSLOD=5.7683;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:18:37.08:0,37,195	0/0:12,0:12:30.08:0,30,332	0/0:7,2:9:2.46:0,2,157	0/0:12,0:11:14.36:0,14,184	0/0:20,0:20:48.60:0,49,532	1/1:0,19:19:56.99:495,57,0	1/1:3,9:12:26.99:234,27,0	1/1:12,21:33:62.91:539,63,0	1/1:1,25:26:68.99:599,69,0	0/0:29,0:29:70.74:0,71,767	0/0:27,0:27:72.19:0,72,797	1/1:5,15:20:44.98:391,45,0	1/1:0,18:18:47.99:417,48,0	1/1:1,19:20:47.99:417,48,0	0/0:14,0:14:13.09:0,13,372	0/0:20,0:20:57.15:0,57,631	0/0:11,0:11:30.08:0,30,332	0/0:9,0:9:27.07:0,27,299	0/0:19,0:19:48.13:0,48,531	0/0:29,0:29:78.16:0,78,828	0/0:8,0:8:18.05:0,18,199	1/1:5,18:23:47.97:417,48,0	1/1:1,16:17:47.99:417,48,0	1/1:1,14:15:35.99:312,36,0	0/0:15,0:16:47.96:0,48,512	0/0:26,0:26:72.13:0,72,781	0/0:22,0:22:60.14:0,60,648	0/0:22,0:22:48.10:0,48,513
chr10	81444797	.	TA	T	938.08	PASS	AB=0.917;AC=22;AF=0.393;AN=56;BaseQRankSum=3.833;DP=219;FS=35.216;HRun=9;HaplotypeScore=79.0385;InbreedingCoeff=0.4742;MQ=42.38;MQ0=5;MQRankSum=-1.114;QD=9.98;ReadPosRankSum=3.983;VQSLOD=0.2512;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:13.73:0,14,64	0/0:1,0:1:3.01:0,3,35	0/0:4,0:2:3.01:0,3,35	0/0:7,0:3:5.21:0,5,31	1/1:9,2:9:5.58:94,6,0	0/0:13,0:13:25.10:0,25,120	0/0:7,0:7:11.36:0,11,56	0/0:22,0:22:47.96:0,48,521	0/0:5,0:5:5.68:0,6,28	1/1:15,0:15:23.04:222,23,0	0/1:6,2:8:18.24:53,0,18	0/0:11,0:11:14.20:0,14,70	0/0:9,0:8:5.68:0,6,28	0/0:5,0:5:11.36:0,11,56	1/1:3,0:3:8.75:50,9,0	1/1:1,0:1:2.90:16,3,0	0/0:1,0:1:2.96:0,3,19	0/1:6,0:6:10.59:34,0,11	1/1:1,3:4:9:82,9,0	1/1:2,1:3:2.92:17,3,0	1/1:1,1:2:5.90:43,6,0	0/0:8,0:8:14.24:0,14,71	0/0:8,0:7:10.40:0,10,44	0/0:5,0:6:5.44:0,5,24	1/1:9,0:9:7.55:116,8,0	1/1:15,0:15:25.07:214,25,0	0/1:11,2:13:4.05:140,0,4	0/1:4,0:4:7.14:37,0,7
chr10	81444801	.	A	AAAAAG	9224.91	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-0.634;DP=239;FS=20.342;HRun=0;HaplotypeScore=69.9251;InbreedingCoeff=0.5820;MQ=46.22;MQ0=5;MQRankSum=-5.160;QD=45.67;ReadPosRankSum=3.954;VQSLOD=3.1347;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:21:17.93:353,18,0	0/0:1,0:1:3.01:0,3,59	0/0:5,0:3:6.02:0,6,88	0/0:8,0:4:8.20:0,8,53	1/1:3,8:9:27.01:707,27,0	1/1:2,0:17:27.09:586,27,0	1/1:2,0:7:12.03:260,12,0	0/0:23,0:22:49.08:0,49,633	1/1:0,0:8:5.91:130,6,0	1/1:3,13:16:42.14:1175,42,0	1/1:5,3:8:20.98:464,21,0	1/1:2,0:9:15.05:320,15,0	1/1:2,0:7:6.01:130,6,0	1/1:0,0:6:12.04:260,12,0	1/1:0,3:3:9.03:262,9,0	1/1:0,1:1:3.01:87,3,0	1/1:2,0:2:5.98:58,6,0	1/1:3,3:6:17.99:361,18,0	1/1:4,0:4:12.02:162,12,0	1/1:3,1:4:3.01:87,3,0	1/1:1,1:2:6.01:114,6,0	1/1:1,0:7:0.33:246,0,0	1/1:1,0:8:12.03:256,12,0	1/1:5,0:6:2.16:20,2,0	1/1:5,8:13:29.94:732,30,0	1/1:1,14:15:45.15:1263,45,0	1/1:5,8:14:39.06:910,39,0	1/1:1,3:4:11.97:280,12,0
chr10	81444812	.	A	AT	764.57	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.355;DP=240;FS=4.666;HRun=0;HaplotypeScore=92.4293;InbreedingCoeff=0.4184;MQ=56.33;MQ0=4;MQRankSum=5.021;QD=30.58;ReadPosRankSum=-4.038;VQSLOD=2.1780;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:21.77:0,22,177	0/0:1,0:1:3.01:0,3,42	0/0:7,0:5:8.80:0,9,131	0/0:10,0:6:14.96:0,15,156	0/0:13,0:11:24.99:0,25,141	0/0:13,0:13:29.94:0,30,303	0/0:6,0:6:14.82:0,15,134	1/1:3,22:25:66.03:858,66,0	0/0:8,0:8:8.82:0,9,98	0/0:16,0:16:44.41:0,44,317	0/0:9,0:9:19.11:0,19,193	0/0:9,0:9:18.48:0,18,162	0/0:5,0:4:6.01:0,6,60	0/0:5,0:5:12.02:0,12,120	0/0:3,0:3:8.56:0,9,43	0/0:1,0:1:2.90:0,3,16	0/0:2,0:2:6.02:0,6,70	0/0:7,0:7:20.79:0,21,183	0/0:8,0:8:19.70:0,20,183	0/0:5,0:5:8.82:0,9,71	0/0:2,0:2:2.84:0,3,14	0/0:4,0:4:12.02:0,12,118	0/0:8,0:7:7.91:0,8,99	0/0:4,0:4:8.95:0,9,69	0/0:16,0:15:43.74:0,44,350	0/0:15,0:15:44.25:0,44,290	0/0:15,0:15:40.69:0,41,293	0/0:5,0:5:14.70:0,15,122
chr10	81444813	.	G	GA	2274.84	PASS	AB=0.944;AC=31;AF=0.554;AN=56;BaseQRankSum=2.498;DP=243;FS=35.965;HRun=5;HaplotypeScore=86.7448;InbreedingCoeff=0.4356;MQ=56.38;MQ0=4;MQRankSum=-2.274;QD=13.38;ReadPosRankSum=2.154;VQSLOD=1.1087;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:18.82:0,19,116	0/0:1,0:1:3.01:0,3,34	0/0:7,0:5:11.22:0,11,134	0/0:10,0:6:15.04:0,15,163	1/1:11,2:11:23.64:186,24,0	0/0:13,0:13:4.53:0,5,91	0/1:6,0:6:26.52:27,0,39	1/1:25,0:25:69.20:887,69,0	0/0:8,0:8:7.91:0,8,53	1/1:16,0:16:38.02:282,38,0	1/1:7,2:9:9.19:107,9,0	0/1:9,0:9:14.82:15,0,109	0/0:4,1:4:4.99:0,5,18	0/0:5,0:5:9.98:0,10,38	1/1:3,0:3:8.95:65,9,0	1/1:1,0:1:2.98:22,3,0	0/0:2,0:2:0.74:0,1,2	1/1:8,0:8:4.32:60,4,0	0/1:7,1:8:7.16:28,0,7	0/1:4,1:5:1.07:16,0,1	1/1:2,0:2:2.98:21,3,0	0/0:4,0:4:9.98:0,10,37	0/1:8,0:7:26.50:26,0,28	1/1:3,1:4:0.21:0,0,0	1/1:17,0:16:9.47:149,9,0	1/1:15,0:15:43.01:309,43,0	1/1:15,1:16:25.33:194,25,0	1/1:5,0:5:4.79:59,5,0
chr10	81444816	.	AAG	A	614.61	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=4.954;DP=256;FS=56.216;HRun=0;HaplotypeScore=99.1661;InbreedingCoeff=0.7475;MQ=60.72;MQ0=4;MQRankSum=-4.280;QD=4.55;ReadPosRankSum=1.598;VQSLOD=0.5899;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:20.86:0,21,310	0/0:1,0:1:3.01:0,3,55	0/1:8,0:6:1.51:2,0,227	0/0:11,0:7:15.05:0,15,220	1/1:13,0:11:17.42:70,17,0	0/0:14,0:14:33.10:0,33,512	0/0:6,0:6:15.05:0,15,230	0/0:28,0:28:77.41:0,77,645	0/0:9,0:9:12.02:0,12,179	1/1:17,1:18:28.55:102,29,0	1/1:9,1:10:8.02:48,8,0	0/0:9,0:9:24.08:0,24,390	0/0:4,0:3:6.02:0,6,99	0/0:5,0:5:12.04:0,12,198	1/1:3,1:4:8.45:42,8,0	1/1:1,1:2:4.82:31,5,0	1/1:2,0:2:3.63:11,4,0	1/1:7,1:8:16.32:60,16,0	1/1:7,1:8:1.21:62,1,0	1/1:5,1:6:9.13:44,9,0	1/1:2,0:2:1.82:5,2,0	0/0:4,0:4:12.04:0,12,198	0/0:10,0:9:18.02:0,18,226	0/0:4,0:4:3.01:0,3,38	1/1:16,2:17:33.66:136,34,0	1/1:15,0:15:27.25:78,27,0	1/1:15,1:16:27.52:97,28,0	1/1:5,0:5:9.53:27,10,0
chr10	81444817	.	AG	A	4497.91	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-0.140;DP=252;FS=62.189;HRun=1;HaplotypeScore=82.2769;InbreedingCoeff=0.8074;MQ=63.11;MQ0=4;MQRankSum=-4.313;QD=33.57;ReadPosRankSum=1.081;VQSLOD=-0.0717;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:20.88:0,21,257	0/0:1,0:1:3.01:0,3,44	0/1:8,0:6:2.38:2,0,183	0/0:12,0:8:17.97:0,18,207	1/1:2,11:11:32.80:342,33,0	0/0:14,0:14:33.09:0,33,402	0/0:5,0:5:15.04:0,15,181	0/0:26,0:26:71.69:0,72,395	0/0:9,0:9:11.82:0,12,144	1/1:2,16:18:54.17:706,54,0	1/1:3,7:10:14.18:313,14,0	0/0:8,0:8:23.94:0,24,296	0/0:4,0:3:6.02:0,6,74	0/0:5,0:5:12.04:0,12,150	1/1:1,3:4:12.03:151,12,0	1/1:1,1:2:6.01:67,6,0	1/1:0,2:2:6.02:83,6,0	1/1:1,7:8:24.05:312,24,0	1/1:3,5:8:20.22:263,20,0	1/1:2,4:6:12.03:149,12,0	1/1:0,2:2:3.01:41,3,0	0/0:4,0:4:12.04:0,12,149	0/0:10,0:9:17.82:0,18,182	0/0:4,0:4:2.87:0,3,33	1/1:2,16:17:51.16:677,51,0	1/1:0,15:15:45.15:620,45,0	1/1:2,13:15:42.13:563,42,0	1/1:0,5:5:15.05:208,15,0
chr10	81444876	.	T	TG	7740.90	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-3.083;DP=340;FS=50.124;HRun=0;HaplotypeScore=47.7223;InbreedingCoeff=0.9566;MQ=65.53;MQ0=0;MQRankSum=-0.088;QD=42.53;ReadPosRankSum=1.988;VQSLOD=1.2957;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:60.16:0,60,814	0/0:3,0:3:6.02:0,6,84	0/0:4,0:4:12.02:0,12,140	0/0:6,0:6:12.43:0,12,138	1/1:0,11:11:33.11:504,33,0	0/0:18,0:18:41.99:0,42,501	0/0:7,0:7:20.98:0,21,250	0/0:39,0:39:99:0,114,1515	0/0:9,0:9:21.03:0,21,271	1/1:1,14:15:45.11:661,45,0	1/1:1,17:18:54.10:794,54,0	0/0:7,0:7:20.99:0,21,250	0/0:6,0:6:15.02:0,15,188	0/0:4,0:4:8.96:0,9,84	1/1:0,9:9:27.09:412,27,0	1/1:0,6:6:15.05:230,15,0	1/1:0,6:6:18.06:275,18,0	1/1:0,15:15:42.14:641,42,0	1/1:0,13:13:39.13:576,39,0	1/1:0,15:15:42.14:642,42,0	1/1:0,6:6:18.06:275,18,0	0/0:10,0:10:30.06:0,30,397	0/0:14,0:14:36.03:0,36,458	0/0:6,0:6:12.04:0,12,168	1/1:1,22:22:66.14:952,66,0	1/1:1,15:16:45.11:661,45,0	1/1:2,19:21:51.17:753,51,0	1/1:0,8:8:24.08:366,24,0
chr10	81445128	.	TAA	T	2581.47	PASS	AB=0.583;AC=17;AF=0.304;AN=56;BaseQRankSum=-12.596;DP=580;FS=6.678;HRun=13;HaplotypeScore=121.5322;InbreedingCoeff=0.9323;MQ=79.28;MQ0=2;MQRankSum=0.302;QD=16.98;ReadPosRankSum=2.078;VQSLOD=2.4441;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:20:32.44:0,32,111	0/0:4,0:4:9.03:0,9,130	0/0:37,0:22:22.80:0,23,241	0/0:24,0:17:8.34:0,8,208	0/0:29,0:28:68.74:0,69,541	1/1:2,12:14:12.54:280,13,0	0/1:2,4:7:0.08:50,0,0	0/0:8,1:25:20.60:0,21,227	1/1:0,11:13:29.53:256,30,0	0/0:20,0:20:50.83:0,51,402	0/0:16,0:16:38.87:0,39,305	1/1:1,13:16:23.91:332,24,0	1/1:7,18:27:50.21:493,50,0	1/1:2,14:18:38.53:344,39,0	0/0:33,0:33:74.72:0,75,580	0/0:19,0:19:41.84:0,42,325	0/0:27,0:27:68.74:0,69,534	0/0:12,0:13:26.92:0,27,215	0/0:21,0:21:53.80:0,54,419	0/0:16,0:16:38.89:0,39,323	0/0:16,0:17:38.87:0,39,307	1/1:4,13:18:32.74:303,33,0	1/1:5,16:22:38.74:361,39,0	1/1:2,13:16:32.98:370,33,0	0/0:23,0:24:49.86:0,50,414	0/0:29,0:29:67.31:0,67,534	0/0:35,0:35:72.23:0,72,566	0/0:16,0:16:44.85:0,45,350
chr10	81445138	.	A	AG	9685.75	PASS	AB=0.974;AC=29;AF=0.518;AN=56;BaseQRankSum=-8.863;DP=590;FS=0.000;HRun=0;HaplotypeScore=91.2505;InbreedingCoeff=0.9425;MQ=79.21;MQ0=2;MQRankSum=-1.508;QD=27.67;ReadPosRankSum=2.388;VQSLOD=5.3038;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:50.57:0,51,365	0/0:5,0:5:15.03:0,15,178	0/1:37,0:18:4.88:5,0,215	0/0:32,0:21:34.80:0,35,267	1/1:1,28:28:74.92:879,75,0	0/0:16,0:15:41.04:0,41,264	0/0:8,0:8:17.82:0,18,136	0/0:34,0:34:98.54:0,99,824	0/0:17,0:17:41.15:0,41,273	1/1:0,19:19:54.06:645,54,0	1/1:0,16:16:42.05:517,42,0	0/0:15,0:15:41.03:0,41,247	0/0:23,0:23:61.39:0,61,366	0/0:20,0:20:49.92:0,50,323	1/1:1,30:31:75.21:969,75,0	1/1:1,18:19:42.13:543,42,0	1/1:1,28:29:69.22:891,69,0	1/1:1,12:13:27.02:327,27,0	1/1:1,23:24:70.05:825,70,0	1/1:0,17:17:41.89:483,42,0	1/1:1,14:15:39.07:485,39,0	0/0:15,0:15:35.12:0,35,215	0/0:19,0:19:43.94:0,44,267	0/0:15,0:15:43.99:0,44,271	1/1:1,23:24:56.97:707,57,0	1/1:0,28:28:77.92:959,78,0	1/1:3,27:30:61.53:871,62,0	1/1:0,18:18:45.15:580,45,0
chr10	81446056	.	T	TAAC	16725.40	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-2.366;DP=603;FS=26.744;HRun=0;HaplotypeScore=84.4937;InbreedingCoeff=0.9984;MQ=81.57;MQ0=0;MQRankSum=-4.299;QD=50.68;ReadPosRankSum=2.764;VQSLOD=4.0965;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.27:0,78,1253	0/0:9,0:9:24.08:0,24,386	0/0:19,0:19:39.13:0,39,599	0/0:14,0:15:39.13:0,39,614	1/1:4,23:29:69.23:1362,69,0	0/0:25,0:25:72.25:0,72,1151	0/0:11,0:11:30.08:0,30,456	0/0:31,0:31:90.31:0,90,1442	0/0:15,0:15:42.14:0,42,675	1/1:0,30:30:90.28:1882,90,0	1/1:3,11:14:33.11:661,33,0	0/0:24,0:24:72.22:0,72,1128	0/0:14,0:14:42.13:0,42,647	0/0:20,0:20:60.19:0,60,941	1/1:3,27:30:81.28:1759,81,0	1/1:3,19:22:48.16:1059,48,0	1/1:3,23:26:54.19:1185,54,0	1/1:0,8:9:18.06:389,18,0	1/1:4,19:24:54.12:1030,54,0	1/1:7,30:40:90.30:1835,90,0	1/1:3,21:24:54.18:1163,54,0	0/0:18,0:18:48.16:0,48,770	0/0:22,0:22:60.20:0,60,959	0/0:21,0:21:63.20:0,63,988	1/1:0,18:19:54.19:1192,54,0	1/1:4,27:31:81.28:1711,81,0	1/1:4,16:20:42.14:897,42,0	1/1:2,10:12:30.10:600,30,0
chr10	81448609	.	CT	C	11564.17	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=12.797;DP=593;FS=16.627;HRun=2;HaplotypeScore=84.3675;InbreedingCoeff=0.9977;MQ=70.50;MQ0=2;MQRankSum=-0.735;QD=36.03;ReadPosRankSum=4.550;VQSLOD=3.3877;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:38.38:0,38,500	0/0:5,0:5:15.05:0,15,225	0/0:31,0:22:52.28:0,52,664	0/0:46,0:32:52.90:0,53,823	1/1:0,38:38:99:1402,108,0	0/0:23,0:23:66.20:0,66,951	0/0:14,0:14:39.13:0,39,581	0/0:18,0:18:48.16:0,48,709	0/0:16,0:16:48.16:0,48,719	1/1:1,17:18:51.17:661,51,0	1/1:1,23:24:66.21:857,66,0	0/0:15,0:14:42.14:0,42,629	0/0:19,0:19:57.17:0,57,823	0/0:14,0:14:42.11:0,42,588	1/1:0,18:18:51.17:662,51,0	1/1:0,20:20:54.18:701,54,0	1/1:1,19:20:34.19:638,34,0	1/1:1,16:17:42.07:523,42,0	1/1:1,18:19:54.16:688,54,0	1/1:0,32:32:96.31:1243,96,0	1/1:0,29:29:78.25:1012,78,0	0/0:15,0:15:45.14:0,45,655	0/0:23,0:23:66.21:0,66,962	0/0:18,0:18:51.16:0,51,742	1/1:0,12:12:33.11:428,33,0	1/1:0,25:25:75.22:958,75,0	1/1:0,29:29:81.26:1050,81,0	1/1:0,20:20:57.19:740,57,0
chr10	81450387	.	TA	T	7112.44	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=5.601;DP=311;FS=5.682;HRun=7;HaplotypeScore=69.1872;InbreedingCoeff=0.7845;MQ=87.59;MQ0=0;MQRankSum=-7.928;QD=25.49;ReadPosRankSum=4.146;VQSLOD=5.5231;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,11:14:26.98:262,27,0	0/0:2,0:2:3.01:0,3,38	0/0:19,0:19:41.88:0,42,470	0/0:11,0:11:30.08:0,30,354	1/1:2,10:12:26.98:253,27,0	1/1:1,15:16:42.09:428,42,0	1/1:2,15:17:36.08:367,36,0	1/1:5,18:23:54.07:534,54,0	1/1:0,10:10:30.07:306,30,0	1/1:0,15:15:45.10:458,45,0	1/1:0,8:8:21.05:213,21,0	1/1:2,8:10:24.05:245,24,0	1/1:1,13:14:36.08:367,36,0	1/1:1,13:14:36.08:367,36,0	1/1:0,8:8:21.05:214,21,0	1/1:0,12:12:36.08:367,36,0	1/1:1,2:3:3.01:31,3,0	1/1:0,1:1:3.01:30,3,0	1/1:0,9:9:24.05:245,24,0	1/1:1,12:13:33.07:336,33,0	1/1:1,2:3:5.93:47,6,0	1/1:0,14:14:39.09:398,39,0	1/1:0,10:10:21.05:214,21,0	1/1:0,19:19:48.11:489,48,0	1/1:2,10:12:30.06:305,30,0	1/1:0,10:10:30.05:298,30,0	1/1:0,12:12:33.07:336,33,0	./.
chr10	81450408	.	ACAGAC	A	6703.33	PASS	AC=22;AF=0.440;AN=50;BaseQRankSum=13.492;DP=307;FS=115.124;HRun=0;HaplotypeScore=112.2714;InbreedingCoeff=0.9694;MQ=93.39;MQ0=0;MQRankSum=-12.264;QD=54.50;ReadPosRankSum=1.558;VQSLOD=1.7923;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:33.11:0,33,1019	0/0:2,0:2:6.02:0,6,190	0/0:19,0:19:44.33:0,44,1396	0/0:16,0:16:44.95:0,45,1236	1/1:3,9:12:27.05:537,27,0	0/0:17,0:17:45.14:0,45,1353	0/0:15,0:15:39.13:0,39,1163	0/0:21,0:21:63.22:0,63,1928	0/0:6,0:6:15.05:0,15,475	1/1:2,14:16:42.14:910,42,0	1/1:2,9:11:26.96:490,27,0	0/0:9,0:9:27.09:0,27,829	0/0:14,0:14:42.14:0,42,1281	0/0:12,0:12:33.11:0,33,1038	1/1:2,9:11:27.09:583,27,0	1/1:1,13:14:39.13:843,39,0	./.	./.	1/1:2,7:9:27.09:533,27,0	1/1:2,13:15:45.15:919,45,0	1/1:1,2:3:8.91:102,9,0	0/0:16,0:16:45.15:0,45,1420	0/0:8,0:8:18.06:0,18,548	0/0:16,0:16:45.15:0,45,1425	1/1:1,8:9:24.04:474,24,0	1/1:2,8:10:27.09:580,27,0	1/1:1,12:13:36.07:732,36,0	./.
chr10	81450468	.	A	AATAG	4320.80	PASS	AC=20;AF=0.400;AN=50;BaseQRankSum=8.994;DP=194;FS=53.116;HRun=0;HaplotypeScore=73.9837;InbreedingCoeff=0.8587;MQ=83.90;MQ0=0;MQRankSum=-7.762;QD=63.54;ReadPosRankSum=2.036;VQSLOD=3.0986;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:18.06:0,18,336	0/0:2,0:2:6.02:0,6,112	0/0:17,0:14:33.11:0,33,613	0/0:12,0:9:23.11:0,23,357	1/1:1,5:6:12.04:318,12,0	0/0:6,0:6:15.02:0,15,245	0/0:11,0:11:27.06:0,27,469	0/0:22,0:22:57.19:0,57,1010	0/0:3,0:3:9.02:0,9,137	1/1:5,4:9:21.07:510,21,0	1/1:1,7:8:21.07:544,21,0	0/0:5,0:5:15.05:0,15,280	0/0:5,0:5:15.01:0,15,244	0/0:3,0:3:6.02:0,6,112	1/1:2,6:8:18.06:478,18,0	1/1:1,7:8:21.07:558,21,0	./.	0/0:1,0:1:0:0,0,0	./.	1/1:1,7:8:21.07:557,21,0	1/1:2,2:4:3.01:80,3,0	0/0:15,0:15:42.14:0,42,782	0/0:4,0:4:6.02:0,6,111	0/0:11,0:11:21.07:0,21,389	1/1:0,4:4:12.04:319,12,0	1/1:0,4:4:12.04:319,12,0	1/1:1,8:9:24.08:637,24,0	./.
chr10	81450491	.	TACACACACACACAC	T	733.20	PASS	AB=0.625;AC=11;AF=0.306;AN=36;BaseQRankSum=4.271;DP=142;FS=3.725;HRun=0;HaplotypeScore=76.7682;InbreedingCoeff=0.4325;MQ=84.99;MQ0=0;MQRankSum=-2.507;QD=34.91;ReadPosRankSum=3.064;VQSLOD=2.3746;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:6.02:0,6,310	0/0:3,0:3:2.85:0,3,198	0/0:14,0:10:18.06:0,18,703	0/0:16,0:11:7.55:0,8,803	0/1:2,0:5:6.50:193,0,6	0/0:6,0:5:3.88:0,4,27	0/0:8,0:8:12.04:0,12,386	0/0:18,0:18:33.04:0,33,1079	0/0:4,0:4:5.05:0,5,63	1/1:1,0:2:3.01:108,3,0	1/1:4,1:6:6.02:201,6,0	0/0:2,0:2:3.01:0,3,49	0/0:8,0:8:5.67:0,6,144	./.	1/1:2,1:3:3.01:121,3,0	1/1:1,1:2:3.01:122,3,0	./.	./.	./.	./.	./.	0/0:12,0:12:9.02:0,9,275	./.	0/0:8,0:8:6.02:0,6,244	./.	./.	1/1:2,1:3:3.01:108,3,0	./.
chr10	81450537	.	AAC	A	569.59	PASS	AB=1.000;AC=13;AF=0.722;AN=18;DP=94;FS=0.000;HRun=0;HaplotypeScore=48.8559;MQ=52.51;MQ0=3;QD=9.65;VQSLOD=3.0425;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,3:7:8.62:84,9,0	./.	1/1:13,0:4:0.80:4,1,0	./.	0/1:6,0:6:0.01:0,0,0	1/1:1,3:4:5.93:40,6,0	./.	1/1:6,14:20:39.08:461,39,0	1/1:0,3:3:2.97:21,3,0	./.	./.	./.	1/1:6,0:6:5.60:29,6,0	./.	./.	./.	./.	./.	./.	0/0:1,0:1:0:0,0,0	./.	./.	./.	./.	./.	./.	./.	0/0:1,0:1:0:0,0,0
chr10	81450545	.	CACACACAG	C	207.85	PASS	AC=10;AF=0.417;AN=24;BaseQRankSum=2.913;DP=102;FS=3.448;HRun=0;HaplotypeScore=59.5269;InbreedingCoeff=0.5343;MQ=51.18;MQ0=5;MQRankSum=0.757;QD=13.86;ReadPosRankSum=-1.424;VQSLOD=1.6539;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:9.03:0,9,169	./.	0/0:13,0:4:3.73:0,4,12	./.	1/1:3,3:6:12.04:139,12,0	0/0:4,0:4:5.42:0,5,45	./.	0/0:28,0:28:26.71:0,27,312	0/0:3,0:3:3.01:0,3,37	./.	1/1:4,1:4:6.02:71,6,0	0/0:1,0:1:3:0,3,25	0/0:5,0:6:6.47:0,6,56	./.	./.	./.	./.	./.	./.	1/1:1,0:1:3.01:35,3,0	./.	./.	./.	./.	1/1:2,0:2:2.84:33,3,0	./.	./.	1/1:1,0:1:3.01:37,3,0
chr10	81450571	.	TAC	T	344.76	PASS	AB=1.000;AC=8;AF=0.667;AN=12;BaseQRankSum=-1.095;DP=67;FS=2.539;HRun=0;HaplotypeScore=41.4269;MQ=42.03;MQ0=5;MQRankSum=-2.717;QD=9.85;ReadPosRankSum=-1.744;VQSLOD=2.4545;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:6.61:0,7,30	./.	./.	./.	./.	1/1:1,3:4:8.52:98,9,0	./.	1/1:24,0:23:32.97:287,33,0	0/1:1,0:1:0:0,0,0	./.	./.	1/1:0,1:1:3.01:35,3,0	0/1:5,0:5:0:0,0,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	81451229	.	GGAGA	G	236.23	PASS	AB=0.866;AC=4;AF=0.154;AN=26;BaseQRankSum=1.639;DP=310;FS=6.071;HRun=0;HaplotypeScore=98.3387;InbreedingCoeff=0.2335;MQ=70.48;MQ0=25;MQRankSum=-1.616;QD=3.94;ReadPosRankSum=-0.585;VQSLOD=1.5426;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,8:24:15.04:213,15,0	0/0:7,0:7:3:0,3,25	./.	0/0:65,0:31:0.47:0,0,1	./.	0/0:17,0:17:12.04:0,12,213	0/1:10,0:14:12.88:44,0,13	0/0:26,0:23:5.93:0,6,40	0/0:8,0:11:8.12:0,8,150	./.	./.	0/0:21,0:21:33.11:0,33,541	0/0:12,0:11:3.01:0,3,70	0/1:20,1:20:75.26:75,0,114	./.	./.	./.	./.	./.	./.	./.	0/0:17,0:17:12.01:0,12,167	0/0:5,0:5:6.01:0,6,77	0/0:14,0:14:15.05:0,15,250	./.	./.	./.	./.
chr10	81451721	.	T	TAA	10729.02	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=13.395;DP=480;FS=0.000;HRun=0;HaplotypeScore=91.7808;InbreedingCoeff=0.9647;MQ=78.43;MQ0=0;MQRankSum=-9.197;QD=48.33;ReadPosRankSum=2.508;VQSLOD=5.6554;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39.13:0,39,609	0/0:14,0:14:36.12:0,36,587	0/0:15,0:14:39.12:0,39,565	0/0:15,0:13:36.52:0,37,499	1/1:3,25:28:66.18:1151,66,0	0/0:25,0:25:72.23:0,72,1148	0/0:17,0:17:51.17:0,51,832	0/0:25,0:25:75.20:0,75,1182	0/0:16,0:16:48.15:0,48,759	1/1:3,18:22:60:1028,60,0	1/1:3,14:17:51.13:859,51,0	0/0:14,0:14:42.11:0,42,636	0/0:23,0:23:69.24:0,69,1116	0/0:17,0:17:51.17:0,51,814	1/1:1,17:18:51.17:931,51,0	1/1:2,14:16:45.15:805,45,0	1/1:0,11:11:30.10:543,30,0	1/1:1,3:4:9.03:161,9,0	1/1:0,6:6:18.06:329,18,0	1/1:5,23:28:84.27:1444,84,0	1/1:0,5:5:14.79:225,15,0	0/0:24,0:24:66.18:0,66,1045	0/0:18,0:18:54.16:0,54,855	0/0:21,0:21:63.20:0,63,1000	1/1:4,14:18:51.14:855,51,0	1/1:6,17:23:66.16:1077,66,0	1/1:0,24:24:72.24:1267,72,0	1/1:0,2:2:3.01:53,3,0
chr10	81451749	.	A	AACAC	8763.42	PASS	AB=0.792;AC=26;AF=0.481;AN=54;BaseQRankSum=-0.399;DP=564;FS=3.807;HRun=0;HaplotypeScore=160.1242;InbreedingCoeff=0.8205;MQ=58.59;MQ0=3;MQRankSum=-3.857;QD=27.64;ReadPosRankSum=-4.444;VQSLOD=4.0264;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:22:86.32:86,0,183	0/0:14,0:14:30.10:0,30,488	0/0:23,0:10:5.15:0,5,80	0/0:16,0:10:18.06:0,18,272	1/1:19,7:29:35.77:701,36,0	0/0:20,0:21:42.12:0,42,637	0/0:12,0:12:15.04:0,15,218	0/0:13,0:31:35.69:0,36,334	0/0:17,0:17:42.13:0,42,658	1/1:14,12:33:10.57:1037,11,0	1/1:9,10:20:20.81:387,21,0	0/0:12,0:12:36.12:0,36,585	0/0:17,0:17:30.10:0,30,485	0/0:16,0:17:51.15:0,51,783	1/1:9,14:28:44.62:852,45,0	1/1:7,14:22:35.86:812,36,0	1/1:10,5:14:18.03:327,18,0	0/1:14,3:17:29.03:256,0,29	1/1:7,2:9:18.06:379,18,0	1/1:14,15:33:48.16:1023,48,0	1/1:7,6:14:21.07:491,21,0	0/0:24,0:24:39.13:0,39,635	0/0:20,0:20:36.12:0,36,583	0/0:19,0:20:19.91:0,20,546	1/1:13,10:24:30.10:647,30,0	1/1:11,12:23:45.60:970,46,0	1/1:19,6:26:39.08:795,39,0	./.
chr10	81452440	.	C	CAA	9344.69	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-12.694;DP=478;FS=1.268;HRun=8;HaplotypeScore=53.4945;InbreedingCoeff=0.9769;MQ=65.42;MQ0=7;MQRankSum=0.985;QD=35.00;ReadPosRankSum=2.013;VQSLOD=4.6843;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:51.10:0,51,564	0/0:5,0:5:15.04:0,15,167	0/0:11,0:11:7.05:0,7,185	0/0:13,0:13:31.31:0,31,305	1/1:5,26:30:74.56:1035,75,0	0/0:18,0:18:39.08:0,39,435	0/0:13,0:13:30.07:0,30,334	0/0:32,0:32:84.20:0,84,926	0/0:14,0:14:33.06:0,33,368	1/1:5,14:17:39.12:593,39,0	1/1:0,21:21:57.11:849,57,0	0/0:14,0:14:42.11:0,42,468	0/0:14,0:14:33.05:0,33,346	0/0:19,0:19:57.12:0,57,623	1/1:3,18:20:36.12:568,36,0	1/1:1,10:10:27.09:429,27,0	1/1:2,19:22:40.26:732,40,0	1/1:1,5:8:15.42:201,15,0	1/1:4,17:23:57.17:850,57,0	1/1:2,20:23:63.10:918,63,0	1/1:0,5:5:12.04:190,12,0	0/0:10,0:10:27.04:0,27,283	0/0:15,0:15:39.09:0,39,435	0/0:11,0:11:24.05:0,24,267	1/1:2,17:19:42.14:667,42,0	1/1:4,29:33:89.79:1359,90,0	1/1:3,18:21:45.15:714,45,0	1/1:0,7:7:15.05:238,15,0
chr10	81452585	.	TA	T	822.84	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.552;DP=356;FS=3.854;HRun=2;HaplotypeScore=31.9482;InbreedingCoeff=0.8479;MQ=69.07;MQ0=0;MQRankSum=-0.214;QD=30.48;ReadPosRankSum=0.073;VQSLOD=2.8503;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:30.10:0,30,450	0/0:3,0:3:9.03:0,9,135	0/0:4,0:4:12.04:0,12,166	0/0:4,0:4:6.02:0,6,90	0/0:23,0:23:69.22:0,69,1015	0/0:15,0:15:45.15:0,45,675	1/1:0,6:6:18.06:234,18,0	0/0:37,0:37:99:0,105,1564	0/0:14,0:14:39.13:0,39,585	0/0:14,0:14:42.14:0,42,630	0/0:25,0:25:75.24:0,75,1104	0/0:9,0:9:27.08:0,27,385	1/1:0,7:7:21.07:273,21,0	1/1:0,11:11:30.10:390,30,0	0/0:8,0:8:24.08:0,24,360	0/0:7,0:7:21.07:0,21,314	0/0:21,0:21:63.21:0,63,944	0/0:22,0:21:66.22:0,66,988	0/0:13,0:13:39.12:0,39,567	0/0:21,0:21:63.21:0,63,944	0/0:1,0:1:3.01:0,3,45	1/1:1,2:3:6.02:78,6,0	0/0:4,0:4:12.04:0,12,180	0/0:3,0:3:9.03:0,9,135	0/0:21,0:21:63.21:0,63,944	0/0:21,0:21:60.20:0,60,894	0/0:19,0:19:57.15:0,57,811	0/0:9,0:9:27.09:0,27,405
chr10	81453482	.	TACACACACACAC	T	3679.99	PASS	AB=0.710;AC=14;AF=0.259;AN=54;BaseQRankSum=-1.625;DP=345;FS=17.297;HRun=0;HaplotypeScore=135.8089;InbreedingCoeff=0.5440;MQ=56.96;MQ0=8;MQRankSum=-5.670;QD=34.39;ReadPosRankSum=0.896;VQSLOD=2.1995;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:22:24.01:0,24,326	0/0:3,0:3:6.02:0,6,354	0/0:17,0:11:6.02:0,6,179	0/0:23,0:13:8.77:0,9,253	0/1:16,0:16:4.01:4,0,885	1/1:6,17:24:45.15:1555,45,0	1/1:4,0:7:0.47:1,0,0	0/0:16,0:28:51.16:0,51,1306	1/1:3,5:8:12.04:421,12,0	0/0:6,0:5:15.05:0,15,727	0/0:15,0:14:5.93:0,6,878	1/1:2,9:11:24.08:841,24,0	0/1:5,0:10:7.04:7,0,95	0/1:2,0:8:7.76:8,0,8	0/0:6,0:6:9.03:0,9,453	0/0:7,0:7:9.03:0,9,453	0/0:13,0:13:15.05:0,15,750	0/0:5,0:5:12.04:0,12,599	0/0:14,0:14:20.10:0,20,775	0/0:17,0:17:23.16:0,23,1794	0/0:14,0:12:15.04:0,15,704	0/1:3,0:9:2.50:2,0,49	1/1:5,9:14:24.08:841,24,0	./.	0/0:12,0:12:27.09:0,27,1343	0/0:9,0:9:18.06:0,18,903	0/0:8,0:8:9.02:0,9,361	0/0:13,0:13:21.07:0,21,1053
chr10	81453498	.	C	CACACA	7100.93	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-10.025;DP=385;FS=6.118;HRun=0;HaplotypeScore=86.5688;InbreedingCoeff=0.8756;MQ=51.33;MQ0=25;MQRankSum=4.773;QD=37.77;ReadPosRankSum=3.431;VQSLOD=3.8670;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:36.09:0,36,435	0/0:5,0:5:12.04:0,12,201	0/0:25,0:13:20.78:0,21,254	0/0:22,0:8:22.10:0,22,235	1/1:3,16:18:35.86:672,36,0	0/0:21,0:21:48.10:0,48,558	0/0:5,0:5:3.01:0,3,38	0/0:30,0:30:81.26:0,81,1037	0/0:7,0:7:18.06:0,18,220	1/1:4,6:10:12.35:489,12,0	1/1:2,11:12:26.97:612,27,0	0/0:11,0:11:30.01:0,30,328	0/0:8,0:9:24.08:0,24,303	0/0:10,0:10:27.09:0,27,344	1/1:1,3:4:9.03:224,9,0	1/1:0,5:5:9.03:277,9,0	1/1:3,12:15:21.03:511,21,0	1/1:4,3:5:4.85:209,5,0	1/1:5,8:15:4.85:619,5,0	1/1:1,17:18:42.07:1147,42,0	1/1:6,8:13:14.41:228,14,0	0/0:11,0:11:23.66:0,24,288	0/0:11,0:10:24.07:0,24,287	0/0:5,0:5:3.01:0,3,38	1/1:4,12:17:28.01:749,28,0	1/1:1,8:9:24.08:657,24,0	1/1:0,8:9:9.03:160,9,0	1/1:3,15:17:13.89:547,14,0
chr10	81453500	.	C	CACA	3228.29	PASS	AB=0.966;AC=22;AF=0.393;AN=56;BaseQRankSum=-3.092;DP=384;FS=10.098;HRun=0;HaplotypeScore=87.7477;InbreedingCoeff=0.5245;MQ=53.27;MQ0=25;MQRankSum=2.400;QD=17.55;ReadPosRankSum=7.104;VQSLOD=2.0320;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:35.86:0,36,382	0/0:5,0:5:12.04:0,12,176	0/0:23,0:12:20.78:0,21,262	0/0:25,0:9:21.74:0,22,234	0/1:18,1:19:43.16:245,0,43	0/0:21,0:21:47.78:0,48,358	0/0:5,0:5:3:0,3,27	0/0:32,0:32:93.24:0,93,1090	0/0:7,0:7:17.97:0,18,166	0/1:13,1:10:30.44:227,0,30	0/1:13,0:11:1.79:264,0,2	0/0:12,0:12:29.84:0,30,220	0/0:8,0:9:23.98:0,24,223	0/0:10,0:10:27:0,27,264	1/1:5,0:4:6.02:87,6,0	1/1:5,0:5:9.03:131,9,0	1/1:15,0:15:21.04:304,21,0	1/1:6,1:5:11.40:169,11,0	0/1:14,0:14:17.83:273,0,18	0/1:17,0:17:10.37:477,0,10	1/1:14,1:13:14.97:200,15,0	0/0:11,0:11:23.82:0,24,232	0/0:11,0:10:26.92:0,27,218	0/0:5,0:5:6.02:0,6,76	0/1:19,0:17:4.24:399,0,4	1/1:10,0:8:15:271,15,0	1/1:9,0:8:9.01:108,9,0	1/1:19,0:17:20.43:269,20,0
chr10	81454555	.	TA	T	5275.49	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=17.335;DP=582;FS=2.428;HRun=5;HaplotypeScore=66.2208;InbreedingCoeff=0.9980;MQ=84.98;MQ0=0;MQRankSum=-5.597;QD=30.15;ReadPosRankSum=2.536;VQSLOD=5.6002;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:45.15:0,45,615	0/0:6,0:6:18.06:0,18,246	0/0:23,0:23:66.18:0,66,859	0/0:19,0:19:48.15:0,48,634	0/0:28,0:28:81.26:0,81,1093	1/1:0,21:21:60.16:668,60,0	1/1:1,26:27:69.19:768,69,0	0/0:33,0:33:87.29:0,87,1190	1/1:1,27:28:78.20:859,78,0	0/0:35,0:35:99:0,102,1394	0/0:23,0:23:66.22:0,66,902	1/1:1,22:23:63.17:697,63,0	1/1:3,26:29:81.17:884,81,0	1/1:1,10:11:30.08:334,30,0	0/0:28,0:28:78.26:0,78,1066	0/0:29,0:29:87.29:0,87,1190	0/0:18,0:18:48.16:0,48,654	0/0:15,0:15:39.08:0,39,496	0/0:15,0:15:42.14:0,42,574	0/0:14,0:14:42.14:0,42,574	0/0:12,0:12:30.10:0,30,410	1/1:0,9:9:24.06:264,24,0	1/1:2,14:16:42.11:467,42,0	1/1:0,11:11:30.08:334,30,0	0/0:9,0:9:27.09:0,27,369	0/0:28,0:28:81.24:0,81,1076	0/0:37,0:37:99:0,105,1436	0/0:16,0:16:48.16:0,48,654
chr10	81454829	.	T	TA	1558.94	PASS	AB=0.960;AC=9;AF=0.161;AN=56;BaseQRankSum=-7.431;DP=587;FS=2.942;HRun=11;HaplotypeScore=58.1005;InbreedingCoeff=0.8242;MQ=66.84;MQ0=1;MQRankSum=-0.316;QD=15.44;ReadPosRankSum=-0.686;VQSLOD=3.9699;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,1:20:12.39:0,12,261	0/0:7,0:8:19.97:0,20,145	0/1:23,1:10:3.59:4,0,104	0/0:14,0:11:4.39:0,4,79	0/0:28,0:30:84.67:0,85,631	0/0:16,0:16:38.84:0,39,302	1/1:1,9:11:17.87:166,18,0	0/0:23,0:23:47.30:0,47,354	0/0:18,0:19:52.83:0,53,399	0/0:28,1:29:41.25:0,41,503	0/0:29,1:30:56.21:0,56,619	0/0:12,0:12:26.89:0,27,209	1/1:3,26:29:79.51:768,80,0	1/1:5,20:25:33.88:525,34,0	0/0:28,0:28:77.51:0,78,594	0/0:19,0:19:41.79:0,42,323	0/0:18,0:18:41.79:0,42,321	0/0:21,0:21:48.26:0,48,373	0/0:25,2:28:9.85:0,10,431	0/0:33,0:34:81.77:0,82,615	0/0:9,1:10:20.57:0,21,162	1/1:2,10:12:6.83:250,7,0	0/0:27,0:27:64.78:0,65,493	0/0:10,0:10:29.83:0,30,225	0/0:15,0:15:41.84:0,42,325	0/0:26,0:26:68.73:0,69,534	0/0:31,0:31:80.36:0,80,624	0/0:18,0:18:50.78:0,51,394
chr10	81455037	.	CA	C	8840.77	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=13.337;DP=518;FS=4.501;HRun=6;HaplotypeScore=48.9391;InbreedingCoeff=0.9927;MQ=72.45;MQ0=0;MQRankSum=-1.067;QD=28.80;ReadPosRankSum=3.970;VQSLOD=5.3876;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.14:0,42,553	0/0:4,0:4:12.04:0,12,158	0/0:8,0:8:24.07:0,24,296	0/0:8,0:8:16.29:0,16,189	1/1:1,26:27:75.18:806,75,0	0/0:24,0:24:66.21:0,66,868	0/0:13,0:13:39.13:0,39,513	0/0:23,0:23:66.21:0,66,869	0/0:16,0:16:45.15:0,45,592	1/1:1,22:23:66.16:710,66,0	1/1:3,22:25:63.16:677,63,0	0/0:7,0:7:21.07:0,21,276	0/0:23,0:23:69.22:0,69,907	0/0:17,0:17:51.15:0,51,645	1/1:1,19:20:51.13:548,51,0	1/1:1,17:18:48.12:516,48,0	1/1:2,27:29:75.19:806,75,0	1/1:3,8:11:24.06:258,24,0	1/1:0,18:18:54.14:581,54,0	1/1:2,28:30:72.17:774,72,0	1/1:0,9:9:24.06:258,24,0	0/0:19,0:19:48.16:0,48,632	0/0:22,0:22:66.20:0,66,853	0/0:12,0:12:36.12:0,36,474	1/1:1,26:27:75.19:806,75,0	1/1:2,25:27:75.13:780,75,0	1/1:2,25:27:75.19:806,75,0	1/1:0,16:16:48.12:516,48,0
chr10	81455145	.	A	AC	14046.15	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-7.592;DP=532;FS=3.298;HRun=0;HaplotypeScore=87.7049;InbreedingCoeff=0.9957;MQ=72.58;MQ0=0;MQRankSum=-0.293;QD=45.31;ReadPosRankSum=3.565;VQSLOD=4.7549;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:52.99:0,53,718	0/0:12,0:12:36.12:0,36,504	0/0:10,0:10:26.95:0,27,331	0/0:7,0:7:15.05:0,15,200	1/1:0,30:30:90.31:1438,90,0	0/0:25,0:25:75.23:0,75,1029	0/0:10,0:10:30.10:0,30,419	0/0:29,0:29:81.25:0,81,1102	0/0:21,1:22:18.24:0,18,799	1/1:0,24:24:72.25:1149,72,0	1/1:0,29:29:84.29:1343,84,0	0/0:15,0:15:45.15:0,45,630	0/0:17,0:17:51.17:0,51,713	0/0:18,0:18:51.16:0,51,696	1/1:0,17:17:51.17:815,51,0	1/1:0,13:13:36.12:575,36,0	1/1:1,24:25:69.24:1101,69,0	1/1:1,19:19:57.19:910,57,0	1/1:4,19:23:63.18:959,63,0	1/1:1,31:32:93.32:1487,93,0	1/1:1,13:14:42.14:671,42,0	0/0:9,0:9:24.08:0,24,335	0/0:22,0:22:63.21:0,63,880	0/0:7,0:7:21.07:0,21,294	1/1:2,23:25:69.24:1103,69,0	1/1:1,22:23:66.22:1055,66,0	1/1:1,20:20:54.18:863,54,0	1/1:0,14:14:36.12:575,36,0
chr10	81455595	.	TGC	T	4732.79	PASS	AB=0.983;AC=32;AF=0.571;AN=56;BaseQRankSum=6.175;DP=590;FS=20.272;HRun=0;HaplotypeScore=170.8349;InbreedingCoeff=0.7243;MQ=54.22;MQ0=11;MQRankSum=-6.630;QD=11.98;ReadPosRankSum=0.475;VQSLOD=3.1144;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:18.16:18,0,104	0/0:6,0:6:18.06:0,18,315	0/0:19,0:12:12.57:0,13,286	0/0:20,0:12:30.10:0,30,531	1/1:12,6:18:26.74:223,27,0	0/0:25,0:25:19.65:0,20,147	0/0:20,0:19:17.60:0,18,312	0/0:26,0:25:29.95:0,30,500	0/0:19,0:19:9.66:0,10,244	1/1:16,5:21:38.50:406,38,0	1/1:0,20:20:26.50:177,26,0	0/0:21,0:21:7.56:0,8,151	0/0:21,0:21:37.64:0,38,487	0/0:18,0:17:20.50:0,21,304	1/1:13,9:22:50.40:421,50,0	1/1:14,7:21:39.44:352,39,0	1/1:10,4:14:24.97:189,25,0	1/1:13,1:14:32.88:228,33,0	1/1:1,10:11:29.94:254,30,0	1/1:15,8:23:44.85:365,45,0	1/1:38,3:40:50.34:367,50,0	0/1:22,1:23:6.96:7,0,413	0/1:16,0:16:0.17:0,0,43	0/1:34,1:35:23.19:23,0,267	1/1:17,10:27:58.92:477,59,0	1/1:22,4:25:47.01:495,47,0	1/1:21,12:33:81.98:653,82,0	1/1:1,3:4:8.98:77,9,0
chr10	81455601	.	TGTGC	T	7922.59	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=2.590;DP=592;FS=7.547;HRun=0;HaplotypeScore=181.2946;InbreedingCoeff=0.2807;MQ=50.47;MQ0=12;MQRankSum=-0.904;QD=14.12;ReadPosRankSum=0.173;VQSLOD=3.5793;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:10.08:166,10,0	0/0:8,0:8:19.68:0,20,213	0/1:14,0:7:39.24:39,0,51	0/0:23,0:15:15.01:0,15,157	1/1:16,1:17:23.96:226,24,0	1/1:20,1:21:10.79:61,11,0	0/1:22,0:21:99:146,0,146	1/1:26,0:25:47.80:483,48,0	1/1:18,1:19:9.84:336,10,0	1/1:22,1:23:27.23:403,27,0	1/1:18,0:18:26.60:263,27,0	1/1:18,1:19:3.08:13,3,0	0/1:20,0:20:99:128,0,213	0/1:19,0:18:40.67:246,0,41	1/1:24,0:24:46.17:535,46,0	1/1:22,0:22:41.67:418,42,0	1/1:15,1:16:19.33:279,19,0	1/1:14,0:14:28.44:226,28,0	1/1:11,0:10:18.22:216,18,0	1/1:23,1:24:44.89:412,45,0	1/1:41,1:41:49.83:345,50,0	0/1:21,0:21:99:215,0,139	1/1:18,0:18:13.84:52,14,0	1/1:37,0:37:67.68:422,68,0	1/1:23,0:23:46.81:568,47,0	1/1:26,0:25:58.86:636,59,0	1/1:32,1:33:80.79:938,81,0	1/1:3,0:3:9.03:152,9,0
chr10	81455603	.	TGC	T	8361.66	PASS	AB=0.864;AC=48;AF=0.857;AN=56;BaseQRankSum=2.241;DP=588;FS=7.848;HRun=0;HaplotypeScore=162.4554;InbreedingCoeff=-0.1387;MQ=50.28;MQ0=13;MQRankSum=-1.223;QD=14.22;ReadPosRankSum=-1.100;VQSLOD=4.1683;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:32.66:249,33,0	0/1:8,0:8:9.56:10,0,122	0/1:14,0:6:39.24:39,0,51	0/1:22,0:13:41.49:41,0,176	1/1:13,5:18:27.38:222,27,0	1/1:1,19:20:11.97:155,12,0	0/1:21,2:22:13.54:213,0,14	1/1:28,0:27:35.27:534,35,0	1/1:17,2:19:36.57:375,37,0	1/1:22,2:24:34.55:414,35,0	1/1:11,5:16:26.56:180,27,0	0/1:4,15:19:11.47:83,0,11	0/1:18,1:19:22.08:194,0,22	1/1:18,1:18:24.82:316,25,0	1/1:15,8:23:50.86:424,51,0	1/1:16,6:22:41.91:369,42,0	1/1:12,4:16:18.10:220,18,0	1/1:12,1:13:35.42:245,35,0	1/1:8,2:9:17.41:186,17,0	1/1:20,4:24:44.85:363,45,0	1/1:40,2:41:52.62:385,53,0	0/1:20,1:21:8.95:297,0,9	0/1:4,13:17:13.56:250,0,14	1/1:24,13:37:84:947,84,0	1/1:14,9:23:47.77:388,48,0	1/1:21,4:24:50.60:489,51,0	1/1:21,11:32:86.05:697,86,0	1/1:0,3:3:8.98:77,9,0
chr10	81456679	.	TTAACTC	T	13937.38	PASS	AB=0.750;AC=27;AF=0.482;AN=56;BaseQRankSum=17.999;DP=531;FS=6.232;HRun=0;HaplotypeScore=161.8196;InbreedingCoeff=0.9269;MQ=71.80;MQ0=1;MQRankSum=-17.432;QD=63.07;ReadPosRankSum=4.196;VQSLOD=4.8330;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.32:0,96,3334	0/0:7,0:7:21.07:0,21,752	0/0:28,0:26:63.28:0,63,1935	0/0:21,0:17:46.10:0,46,1396	1/1:0,15:15:42.03:839,42,0	0/0:29,0:29:87.30:0,87,3243	0/0:12,0:12:36.12:0,36,1333	0/0:36,0:36:99:0,105,3638	0/0:21,0:21:63.22:0,63,2248	1/1:0,19:19:54.19:1295,54,0	1/1:1,15:16:44.57:997,45,0	0/0:23,0:23:69.24:0,69,2585	0/0:30,0:30:90.30:0,90,3256	0/0:22,0:22:66.23:0,66,2451	1/1:0,19:19:54.19:1286,54,0	1/1:0,25:25:66.23:1576,66,0	1/1:1,11:12:30.10:718,30,0	0/1:4,2:6:24.90:173,0,25	1/1:1,8:9:23.57:506,24,0	1/1:1,22:23:66.23:1571,66,0	1/1:0,9:9:23.93:455,24,0	0/0:14,0:14:42.14:0,42,1531	0/0:19,0:19:57.19:0,57,2006	0/0:16,0:16:48.16:0,48,1678	1/1:1,18:19:53.68:1287,54,0	1/1:0,18:18:54.17:1244,54,0	1/1:2,21:23:63.74:1490,64,0	1/1:0,8:8:21.07:501,21,0
chr10	81456932	.	GTTTCTTTCCTTCTTTC	G	9682.28	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=9.030;DP=387;FS=2.384;HRun=0;HaplotypeScore=174.8460;InbreedingCoeff=0.4278;MQ=58.68;MQ0=6;MQRankSum=-4.820;QD=32.38;ReadPosRankSum=2.004;VQSLOD=4.3161;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:10:26.98:27,0,153	0/0:10,0:10:27:0,27,643	0/0:10,0:8:11.16:0,11,142	0/0:10,0:7:8.84:0,9,65	1/1:16,3:19:47.99:645,48,0	0/1:18,0:18:31.94:343,0,32	0/0:3,0:3:5.94:0,6,43	0/0:29,0:27:51.03:0,51,469	0/1:18,0:18:39.96:178,0,40	1/1:9,0:8:19.56:178,20,0	1/1:8,2:10:29.96:481,30,0	0/1:13,0:13:39.96:178,0,40	0/0:15,0:15:35.53:0,36,246	0/1:19,0:19:76.94:174,0,77	1/1:9,5:14:39.06:971,39,0	1/1:11,3:14:39.04:703,39,0	1/1:14,0:14:32.77:274,33,0	1/1:14,0:14:41.64:466,42,0	1/1:17,5:21:56.93:1165,57,0	1/1:13,4:17:37.06:857,37,0	1/1:12,0:12:20.96:232,21,0	0/1:7,0:7:73.94:166,0,74	0/1:18,0:18:45.56:264,0,46	0/0:11,0:11:26.88:0,27,216	1/1:6,3:9:27:587,27,0	1/1:13,2:15:41.98:729,42,0	1/1:11,4:15:41.87:870,42,0	1/1:12,0:12:12.88:194,13,0
chr10	81456941	.	CTTCTTTCTTTCTTTCTTTCTTTCT	C	3687.63	PASS	AB=0.964;AC=22;AF=0.423;AN=52;BaseQRankSum=2.114;DP=380;FS=0.634;HRun=0;HaplotypeScore=253.1276;InbreedingCoeff=0.5375;MQ=51.80;MQ0=7;MQRankSum=-6.377;QD=20.49;ReadPosRankSum=3.284;VQSLOD=2.0431;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,2:12:28.60:353,0,29	0/0:11,0:11:24.08:0,24,1188	./.	./.	0/0:23,0:23:42.66:0,43,727	1/1:2,15:17:12.04:740,12,0	1/1:2,0:2:2.97:20,3,0	0/0:16,0:25:15.68:0,16,102	1/1:2,14:16:6.02:377,6,0	0/0:9,0:8:21.07:0,21,488	0/0:11,0:11:7.92:0,8,204	1/1:2,11:13:6.02:377,6,0	1/1:13,0:13:23.79:233,24,0	1/1:5,14:19:6.02:377,6,0	0/0:13,0:13:4.62:0,5,230	0/0:14,0:14:0.45:0,0,357	0/0:11,0:11:12.01:0,12,195	0/0:16,0:16:22.32:0,22,403	0/1:22,0:21:12.20:12,0,422	0/0:17,0:17:13.54:0,14,441	0/0:9,0:9:12.04:0,12,233	1/1:3,5:8:11.97:412,12,0	1/1:3,17:20:12.04:627,12,0	1/1:12,0:12:8.98:154,9,0	0/1:9,0:9:2.21:2,0,202	0/0:15,0:15:14.97:0,15,419	0/1:17,0:17:4.15:4,0,393	0/0:10,0:9:6.02:0,6,87
chr10	81457009	.	AT	A	333.58	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.960;DP=413;FS=0.979;HRun=6;HaplotypeScore=133.4023;InbreedingCoeff=0.5449;MQ=62.80;MQ0=0;MQRankSum=-0.069;QD=10.42;ReadPosRankSum=1.456;VQSLOD=1.1715;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:39.10:419,39,0	0/0:9,0:9:24.08:0,24,311	0/0:10,0:8:20.94:0,21,205	0/1:13,0:12:20.17:20,0,269	0/0:27,0:27:75.20:0,75,962	0/0:21,0:21:45.07:0,45,554	0/0:9,0:9:24.08:0,24,313	0/0:23,0:23:66.20:0,66,854	0/0:18,0:18:30.10:0,30,393	0/0:14,0:14:42.13:0,42,533	0/0:24,0:24:66.20:0,66,853	0/0:15,0:15:18.06:0,18,237	0/0:10,0:10:29.93:0,30,367	0/0:18,0:18:27.07:0,27,340	0/0:15,0:15:45.15:0,45,590	0/0:9,0:9:24.04:0,24,296	0/0:18,0:18:51.12:0,51,645	0/0:11,0:11:27.09:0,27,355	0/0:21,0:21:54.17:0,54,706	0/0:20,0:20:51.17:0,51,671	0/0:3,0:3:6.02:0,6,79	0/0:8,0:8:15.05:0,15,197	0/0:14,0:14:9.03:0,9,118	0/0:4,0:4:9.03:0,9,118	0/0:16,0:16:42.10:0,42,534	0/0:17,0:17:48.16:0,48,629	0/0:19,0:19:51.16:0,51,657	0/0:8,0:8:23.91:0,24,290
chr10	81457023	.	A	AT	7642.10	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=9.058;DP=407;FS=9.723;HRun=5;HaplotypeScore=74.5776;InbreedingCoeff=0.9680;MQ=59.84;MQ0=1;MQRankSum=-2.852;QD=33.96;ReadPosRankSum=0.683;VQSLOD=4.7098;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:39.10:0,39,419	0/0:10,0:10:30.08:0,30,322	0/0:8,0:6:11.93:0,12,104	0/0:12,0:9:24.03:0,24,241	1/1:1,29:30:75.24:987,75,0	0/0:20,0:20:42.11:0,42,451	0/0:8,0:8:24.04:0,24,249	0/0:22,0:22:54.13:0,54,580	0/0:17,0:17:27.07:0,27,290	1/1:0,17:17:51.17:671,51,0	1/1:3,22:25:66.21:865,66,0	0/0:16,0:16:21.05:0,21,226	0/0:11,0:11:33.08:0,33,353	0/0:16,0:16:24.06:0,24,258	1/1:3,10:13:27.09:355,27,0	1/1:0,9:9:27.09:355,27,0	1/1:1,17:18:48.16:631,48,0	1/1:1,10:12:27.09:355,27,0	1/1:2,15:17:45.15:589,45,0	1/1:3,16:19:48.16:628,48,0	1/1:0,3:3:6.02:79,6,0	0/0:5,0:5:15.04:0,15,161	0/0:13,0:13:18.04:0,18,193	0/0:3,0:3:9.02:0,9,97	1/1:2,12:14:33.11:434,33,0	1/1:3,14:17:42.14:553,42,0	1/1:0,19:19:57.18:745,57,0	1/1:2,10:12:30.57:396,31,0
chr10	81459460	.	A	AGGTGGTT	13839.16	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=8.310;DP=358;FS=13.063;HRun=0;HaplotypeScore=89.2119;InbreedingCoeff=0.9338;MQ=47.97;MQ0=1;MQRankSum=-9.542;QD=78.63;ReadPosRankSum=1.860;VQSLOD=4.5605;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:33.07:0,33,762	0/0:5,0:5:12.04:0,12,299	0/0:12,0:11:27.09:0,27,671	0/0:17,0:11:18.53:0,19,437	1/1:5,10:17:30.10:1104,30,0	0/0:20,0:20:51.17:0,51,1203	0/0:9,0:9:24.08:0,24,599	0/0:20,0:20:39.13:0,39,970	0/0:6,0:6:18.06:0,18,416	1/1:5,7:13:36.12:1263,36,0	1/1:8,9:17:36.12:1364,36,0	0/0:9,0:9:27.05:0,27,442	0/0:17,0:17:45.15:0,45,1082	0/0:11,0:10:24.08:0,24,559	1/1:7,8:15:33.11:1271,33,0	1/1:4,7:12:30.10:1090,30,0	1/1:5,6:11:15.05:583,15,0	0/1:10,0:10:5:373,0,5	1/1:3,6:9:24.08:798,24,0	1/1:2,7:10:27.09:969,27,0	1/1:6,6:14:27.09:1036,27,0	0/0:12,0:12:24.08:0,24,594	0/0:18,0:18:48.16:0,48,1163	0/0:11,0:11:30.10:0,30,745	1/1:3,4:8:18.06:675,18,0	1/1:5,8:14:36.12:1260,36,0	1/1:6,7:13:30.10:1121,30,0	1/1:7,4:12:24.08:931,24,0
chr10	81459560	.	GATATAT	G	185.38	PASS	AB=1.000;AC=13;AF=0.464;AN=28;BaseQRankSum=2.472;DP=142;FS=2.158;HRun=0;HaplotypeScore=31.4955;InbreedingCoeff=0.3260;MQ=59.10;MQ0=11;MQRankSum=0.088;QD=4.21;ReadPosRankSum=1.766;VQSLOD=0.8165;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:6:5.51:29,0,6	./.	0/0:11,0:9:0.47:0,0,1	./.	./.	./.	./.	0/0:13,0:11:6.88:0,7,83	./.	0/0:3,0:3:2.98:0,3,21	./.	0/0:3,0:3:2.99:0,3,24	1/1:2,0:2:0.89:2,1,0	./.	1/1:3,0:3:3.01:52,3,0	./.	1/1:8,0:9:3.01:61,3,0	1/1:13,0:10:5.98:73,6,0	1/1:3,2:5:5.05:63,5,0	./.	./.	0/0:4,0:4:2.99:0,3,24	./.	0/0:2,0:2:3.01:0,3,72	./.	0/0:5,0:5:2.04:0,2,6	./.	1/1:3,0:3:1.25:3,1,0
chr10	81459645	.	GTGTC	G	786	PASS	AC=36;AF=0.692;AN=52;BaseQRankSum=0.126;DP=238;FS=5.154;HRun=0;HaplotypeScore=51.0865;InbreedingCoeff=0.5047;MQ=35.30;MQ0=49;MQRankSum=0.196;QD=4.79;ReadPosRankSum=-1.525;VQSLOD=1.0294;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:8:8.98:72,9,0	0/0:3,0:2:3.01:0,3,69	0/0:8,0:3:2.08:0,2,32	0/0:6,0:1:2.99:0,3,23	1/1:13,0:9:5.99:48,6,0	1/1:6,0:4:5.49:49,5,0	0/0:7,0:3:2.99:0,3,24	0/0:6,0:5:5.93:0,6,40	1/1:4,0:4:2.49:24,2,0	1/1:2,0:1:2.99:23,3,0	1/1:8,0:6:3:25,3,0	1/1:6,0:5:3:25,3,0	0/0:9,0:6:11.89:0,12,91	0/0:11,0:6:14.81:0,15,110	1/1:10,0:8:8.96:75,9,0	1/1:7,0:7:2.31:24,2,0	1/1:9,0:9:5.52:42,6,0	1/1:10,0:7:8.90:60,9,0	1/1:7,0:5:8.89:59,9,0	1/1:8,0:6:2.99:25,3,0	1/1:14,0:10:5.99:50,6,0	0/0:9,0:8:14.98:0,15,125	./.	1/1:20,0:14:26.78:218,27,0	./.	1/1:10,0:8:2.10:18,2,0	1/1:3,7:9:2.76:47,3,0	1/1:8,1:5:8.89:61,9,0
chr10	81459925	.	TTTTA	T	10255.84	PASS	AB=0.552;AC=27;AF=0.482;AN=56;BaseQRankSum=13.196;DP=442;FS=5.249;HRun=0;HaplotypeScore=88.7955;InbreedingCoeff=0.9162;MQ=76.39;MQ0=0;MQRankSum=-10.884;QD=45.18;ReadPosRankSum=2.461;VQSLOD=5.3424;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:45.56:0,46,1455	0/0:6,0:6:18.06:0,18,436	0/0:19,1:20:23.70:0,24,1153	0/0:10,0:10:30.10:0,30,703	1/1:1,12:13:36.11:619,36,0	0/0:20,0:20:57.20:0,57,1494	0/0:13,0:13:36.12:0,36,938	0/0:33,0:33:78.26:0,78,1945	0/0:11,0:11:33.11:0,33,857	1/1:2,11:13:33.11:582,33,0	1/1:3,7:10:27.09:467,27,0	0/0:16,0:16:39.13:0,39,1015	0/0:13,0:13:36.10:0,36,825	0/0:13,0:13:39.13:0,39,1021	1/1:4,9:13:27.09:491,27,0	0/1:3,13:16:36.46:666,0,36	1/1:4,12:15:36.12:653,36,0	1/1:1,7:8:21.07:364,21,0	1/1:2,13:14:39.13:700,39,0	1/1:2,21:23:57.19:999,57,0	1/1:0,4:4:9.03:164,9,0	0/0:17,0:17:51.18:0,51,1307	0/0:11,0:11:30.10:0,30,785	0/0:9,0:9:27.09:0,27,652	1/1:3,6:8:21.07:382,21,0	1/1:6,26:32:87.30:1545,87,0	1/1:6,39:44:99:2296,129,0	1/1:4,6:10:18.06:327,18,0
chr10	81459964	.	G	GTT	2193.83	PASS	AB=0.669;AC=24;AF=0.429;AN=56;BaseQRankSum=9.555;DP=481;FS=1.808;HRun=11;HaplotypeScore=100.5590;InbreedingCoeff=0.5088;MQ=53.27;MQ0=2;MQRankSum=-3.634;QD=7.26;ReadPosRankSum=-2.610;VQSLOD=0.5743;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:59.78:0,60,564	0/0:8,0:8:15.01:0,15,145	0/0:11,0:8:11.29:0,11,80	0/1:3,0:2:0:0,0,0	1/1:6,1:24:39.80:193,40,0	0/0:17,0:19:29.70:0,30,407	0/0:10,0:13:14.50:0,15,220	1/1:15,18:33:60.02:773,60,0	0/0:14,0:15:35.98:0,36,393	0/1:7,0:12:9.76:45,0,10	0/1:7,0:17:51.49:51,0,52	0/0:12,0:12:30.02:0,30,291	0/0:13,0:13:36.05:0,36,349	0/0:14,0:15:35.77:0,36,332	0/1:5,0:17:3.63:52,0,4	0/1:7,0:14:30.36:30,0,37	1/1:6,0:18:22.96:94,23,0	1/1:4,3:15:31.49:207,31,0	1/1:5,2:18:4.98:145,5,0	1/1:11,0:19:25.77:107,26,0	1/1:3,0:10:12.48:43,12,0	0/0:16,0:18:26.90:0,27,311	0/0:15,0:15:33:0,33,313	0/0:13,0:14:38.76:0,39,355	0/1:5,0:12:8.60:40,0,9	1/1:7,3:36:48.30:337,48,0	0/1:12,1:44:1.08:252,0,1	0/1:1,0:5:15.85:21,0,16
chr10	81460333	.	TTTG	T	515.15	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.404;DP=618;FS=3.845;HRun=0;HaplotypeScore=117.4559;InbreedingCoeff=0.9952;MQ=60.13;MQ0=2;MQRankSum=-1.706;QD=22.40;ReadPosRankSum=1.367;VQSLOD=3.7740;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,18:23:42.10:610,42,0	0/0:9,0:9:21.07:0,21,445	0/0:25,0:22:60.18:0,60,993	0/0:27,0:24:67.57:0,68,1076	0/0:25,0:25:60.19:0,60,1095	0/0:27,0:27:75.26:0,75,1538	0/0:26,0:26:72.18:0,72,1412	0/0:26,0:26:69.24:0,69,1369	0/0:16,0:16:39.11:0,39,749	0/0:29,0:29:69.24:0,69,1395	0/0:23,0:23:63.22:0,63,1292	0/0:23,0:23:66.23:0,66,1359	0/0:20,0:20:51.17:0,51,1061	0/0:25,0:25:57.16:0,57,1116	0/0:21,0:21:54.19:0,54,1117	0/0:24,0:24:63.20:0,63,1264	0/0:15,0:15:39.13:0,39,789	0/0:17,0:17:39.13:0,39,796	0/0:20,0:20:39.08:0,39,701	0/0:32,0:32:84.29:0,84,1641	0/0:17,0:17:48.16:0,48,976	0/0:21,0:21:60.17:0,60,1103	0/0:28,0:28:69.19:0,69,1325	0/0:19,0:19:51.13:0,51,954	0/0:17,0:17:42.14:0,42,851	0/0:25,0:25:63.16:0,63,1272	0/0:27,0:26:63.22:0,63,1270	0/0:10,0:10:30.06:0,30,525
chr10	81460375	.	G	GTTGT	16784.73	PASS	AB=0.775;AC=28;AF=0.500;AN=56;BaseQRankSum=13.567;DP=559;FS=26.864;HRun=0;HaplotypeScore=106.0240;InbreedingCoeff=0.8611;MQ=53.46;MQ0=2;MQRankSum=-11.507;QD=61.48;ReadPosRankSum=0.710;VQSLOD=3.8225;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.24:0,69,1337	0/0:8,0:8:24.07:0,24,431	0/0:21,0:17:45.12:0,45,801	0/0:32,0:25:69.23:0,69,1283	1/1:2,19:22:54.07:1248,54,0	0/0:29,0:29:84.27:0,84,1594	0/1:19,0:19:27.75:28,0,890	0/0:33,0:33:93.31:0,93,1761	0/0:15,0:15:39.13:0,39,756	1/1:6,15:22:66.17:1574,66,0	1/1:5,18:23:63.17:1563,63,0	0/0:19,0:19:54.18:0,54,1012	0/0:15,0:15:42.12:0,42,770	0/0:18,0:18:48.14:0,48,885	1/1:4,13:17:42.14:1104,42,0	1/1:2,10:13:33.11:903,33,0	1/1:4,16:21:60.21:1625,60,0	0/1:2,9:11:11.70:630,0,12	1/1:7,11:18:51.18:1336,51,0	1/1:4,23:28:72.20:1742,72,0	1/1:3,11:14:33.11:903,33,0	0/0:20,0:20:32.18:0,32,987	0/0:22,0:22:63.22:0,63,1211	0/0:27,0:27:81.28:0,81,1570	1/1:0,15:16:48.16:1220,48,0	1/1:8,11:19:45.15:1136,45,0	1/1:6,15:22:42.14:1141,42,0	1/1:1,7:8:24.08:631,24,0
chr10	81460510	.	CTT	C	2435.61	PASS	AB=0.989;AC=18;AF=0.321;AN=56;BaseQRankSum=-7.689;DP=547;FS=21.881;HRun=12;HaplotypeScore=97.6132;InbreedingCoeff=0.4020;MQ=57.62;MQ0=4;MQRankSum=2.961;QD=9.90;ReadPosRankSum=3.438;VQSLOD=0.5750;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:34:46.33:673,46,0	0/0:12,0:12:34.63:0,35,456	0/0:19,0:7:11.52:0,12,110	0/1:13,0:10:8.35:8,0,90	0/0:29,0:29:10.11:0,10,143	1/1:1,13:14:27.05:273,27,0	0/0:4,0:20:22.13:0,22,77	0/0:12,0:45:80.73:0,81,307	1/1:4,12:16:18.03:183,18,0	0/1:20,0:21:19.14:19,0,161	0/1:17,0:18:22.81:23,0,40	1/1:2,22:24:42.07:427,42,0	0/0:6,0:24:40.43:0,40,162	0/0:4,0:18:22.46:0,22,79	0/0:17,0:17:1.97:0,2,221	0/0:17,0:16:8.67:0,9,85	0/0:13,0:13:10.06:0,10,63	0/0:8,0:8:2.37:0,2,38	0/1:28,0:28:3.77:4,0,319	0/1:16,0:16:12.75:13,0,99	0/0:4,0:4:5.87:0,6,42	0/0:4,0:22:20.02:0,20,143	1/1:0,18:18:45.57:457,46,0	1/1:1,20:21:51.11:519,51,0	0/0:22,0:22:9.73:0,10,64	0/1:22,0:21:20.53:21,0,308	0/0:23,0:21:0.30:0,0,22	0/0:5,0:6:6.75:0,7,42
chr10	81460516	.	T	TTTTC	3045.27	PASS	AB=0.708;AC=25;AF=0.446;AN=56;BaseQRankSum=-1.024;DP=543;FS=0.415;HRun=0;HaplotypeScore=119.6119;InbreedingCoeff=0.7116;MQ=55.09;MQ0=10;MQRankSum=-2.682;QD=12.80;ReadPosRankSum=-4.973;VQSLOD=1.9308;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:83.26:0,83,859	0/0:13,0:13:39.10:0,39,595	0/0:20,0:4:11.99:0,12,116	0/0:15,0:8:0.77:0,1,142	1/1:26,0:26:36.32:381,36,0	0/0:15,0:15:30.68:0,31,308	0/0:21,0:20:26.93:0,27,316	0/0:48,0:48:99:0,112,1043	0/0:14,0:14:18.05:0,18,205	1/1:4,17:22:45.92:530,46,0	1/1:5,14:20:22.60:254,23,0	0/0:23,0:23:45.10:0,45,494	0/0:21,0:21:48.04:0,48,545	0/0:19,0:19:33.08:0,33,368	1/1:16,1:17:44.95:393,45,0	0/1:15,0:14:7.99:81,0,8	0/1:3,12:16:6.48:83,0,6	1/1:6,0:6:9.87:78,10,0	1/1:2,17:22:18.40:359,18,0	1/1:13,0:13:20.38:154,20,0	0/1:1,3:4:9.77:66,0,10	0/0:21,0:21:51.42:0,51,547	0/0:18,0:17:44.49:0,44,481	0/0:20,0:20:51.15:0,51,577	1/1:4,15:22:8.90:186,9,0	1/1:6,20:25:42.39:582,42,0	1/1:5,15:21:4.98:77,5,0	1/1:6,0:6:1.80:29,2,0
chr10	81460518	.	T	TTC	1872.25	PASS	AB=0.956;AC=19;AF=0.339;AN=56;BaseQRankSum=0.303;DP=530;FS=1.399;HRun=0;HaplotypeScore=102.1657;InbreedingCoeff=0.2325;MQ=54.76;MQ0=10;MQRankSum=-1.314;QD=8.14;ReadPosRankSum=-4.886;VQSLOD=2.3147;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:85.46:0,85,628	0/0:13,0:13:39.08:0,39,504	0/0:21,0:4:11.93:0,12,98	0/0:15,0:8:0.76:0,1,113	0/1:9,17:26:10.67:280,0,11	0/0:14,0:14:29.23:0,29,208	0/0:20,0:19:32.65:0,33,248	0/0:44,0:44:99:0,115,897	0/0:14,0:14:17.90:0,18,133	1/1:20,0:20:0.63:285,1,0	0/1:20,0:20:12.97:149,0,13	0/0:23,0:23:44.75:0,45,333	0/0:20,0:20:47.90:0,48,394	0/0:18,0:18:35.94:0,36,295	1/1:17,0:17:23.64:307,24,0	0/1:14,0:13:24.70:51,0,25	0/1:16,0:16:43.39:52,0,43	0/1:6,0:6:13.56:49,0,14	0/1:21,0:21:15.93:250,0,16	1/1:12,0:12:10.03:146,10,0	0/1:4,0:4:3.99:19,0,4	0/0:23,0:23:53.64:0,54,424	0/0:19,0:18:44.13:0,44,317	0/0:20,0:20:50.71:0,51,376	1/1:20,0:20:8.76:83,9,0	1/1:25,0:24:20.75:336,21,0	0/1:22,0:20:19.65:20,0,26	0/1:7,0:7:21.93:22,0,32
chr10	81460519	.	T	TC	1286.25	PASS	AB=0.954;AC=16;AF=0.286;AN=56;BaseQRankSum=1.773;DP=521;FS=0.428;HRun=0;HaplotypeScore=93.0513;InbreedingCoeff=-0.0634;MQ=54.29;MQ0=11;MQRankSum=-1.703;QD=5.77;ReadPosRankSum=-4.580;VQSLOD=2.6106;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:84.09:0,84,512	0/0:13,0:13:39.06:0,39,491	0/0:20,0:4:11.60:0,12,70	0/0:15,0:7:0.55:0,1,80	0/1:24,1:25:24.15:200,0,24	0/0:14,0:14:28.61:0,29,166	0/0:20,0:19:35.50:0,35,238	0/0:44,0:44:99:0,113,765	0/0:15,0:15:17.55:0,18,101	0/1:20,0:20:25.49:210,0,25	0/1:19,0:19:16.09:85,0,16	0/0:23,0:23:43.91:0,44,258	0/0:20,0:20:47.18:0,47,329	0/0:18,0:18:35.65:0,36,255	1/1:18,0:18:7.05:225,7,0	0/1:4,10:13:27.05:38,0,27	0/1:15,1:16:9.08:9,0,72	0/1:6,0:6:15.52:48,0,16	0/1:21,0:21:57.66:222,0,58	1/1:11,0:11:8.65:109,9,0	0/1:4,0:4:5.82:6,0,15	0/0:22,0:22:59.31:0,59,424	0/0:19,0:18:46.16:0,46,266	0/0:20,0:20:49.65:0,50,283	0/1:17,0:17:8.72:28,0,9	0/1:23,1:23:19.49:235,0,19	0/1:21,0:19:8.29:8,0,25	0/1:7,0:7:23.48:23,0,29
chr10	81462339	.	GA	G	3898.28	PASS	AB=0.681;AC=21;AF=0.389;AN=54;BaseQRankSum=11.635;DP=519;FS=4.781;HRun=11;HaplotypeScore=100.5564;InbreedingCoeff=0.7116;MQ=49.39;MQ0=15;MQRankSum=-11.235;QD=14.18;ReadPosRankSum=3.761;VQSLOD=3.9961;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:19:43.18:0,43,252	0/0:10,0:10:27.06:0,27,281	0/0:2,0:1:0:0,0,0	0/0:6,0:6:8.66:0,9,73	0/1:7,21:27:22.09:253,0,22	0/0:16,0:14:33.07:0,33,345	0/0:16,0:16:30.07:0,30,319	0/0:21,1:20:17.94:0,18,391	0/0:23,0:23:42.06:0,42,429	1/1:8,14:21:37.98:301,38,0	1/1:8,17:25:38.90:319,39,0	0/0:17,0:17:45.06:0,45,459	0/0:14,1:15:14.43:0,14,344	0/0:29,1:30:41.76:0,42,604	1/1:3,18:22:47.90:393,48,0	1/1:6,17:21:50.91:418,51,0	1/1:4,12:16:26.52:220,27,0	0/1:8,3:10:16.20:83,0,16	0/1:13,11:21:25.07:226,0,25	1/1:7,9:16:22.97:178,23,0	0/0:4,0:4:0.47:0,0,1	0/0:22,0:22:60.11:0,60,627	0/0:23,0:22:54.09:0,54,560	0/0:16,0:17:25.90:0,26,306	1/1:5,25:29:65.90:541,66,0	1/1:7,21:26:62.90:516,63,0	1/1:8,18:26:57.96:449,58,0	./.
chr10	81462355	.	CAA	C	7127.01	PASS	AB=0.611;AC=27;AF=0.482;AN=56;BaseQRankSum=13.991;DP=526;FS=8.776;HRun=10;HaplotypeScore=113.1290;InbreedingCoeff=0.9352;MQ=56.79;MQ0=5;MQRankSum=-10.477;QD=24.92;ReadPosRankSum=1.655;VQSLOD=3.8585;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.01:0,51,697	0/0:7,0:7:17.91:0,18,175	0/0:10,0:6:18:0,18,209	0/0:10,0:10:23.93:0,24,271	1/1:4,24:27:60.14:669,60,0	0/0:14,0:15:38.62:0,39,580	0/0:1,0:16:27.45:0,27,94	0/0:24,0:24:60.13:0,60,873	0/0:18,0:18:45.15:0,45,704	1/1:8,17:24:48.06:528,48,0	1/1:3,20:23:57.15:635,57,0	0/0:16,0:19:44.04:0,44,581	0/0:4,0:16:29.94:0,30,103	0/0:6,0:23:43:0,43,160	1/1:5,21:26:63.15:702,63,0	1/1:4,17:21:51.12:568,51,0	1/1:4,16:20:42.10:468,42,0	0/1:4,7:10:2.42:149,0,2	1/1:2,17:19:39.04:493,39,0	1/1:6,8:13:21.04:234,21,0	1/1:0,4:4:9.02:100,9,0	0/0:3,0:19:34.93:0,35,120	0/0:26,0:26:57.11:0,57,849	0/0:17,0:17:33.58:0,34,525	1/1:5,27:31:84.21:934,84,0	1/1:7,23:31:70.94:779,71,0	1/1:5,22:26:69.18:768,69,0	1/1:1,3:4:9.02:100,9,0
chr10	81465262	.	AGATG	A	3428.86	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-0.138;DP=669;FS=1.059;HRun=0;HaplotypeScore=200.7054;InbreedingCoeff=0.9995;MQ=62.93;MQ0=0;MQRankSum=-9.116;QD=49.69;ReadPosRankSum=2.601;VQSLOD=4.4301;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,2695	0/0:13,0:13:39.13:0,39,1030	0/0:28,0:24:63.22:0,63,1685	0/0:27,0:25:72.25:0,72,1872	0/0:24,0:24:69.24:0,69,1825	0/0:21,0:21:63.22:0,63,1726	1/1:0,10:10:27.09:523,27,0	0/0:31,0:31:87.30:0,87,2359	0/0:21,0:21:63.22:0,63,1726	0/0:21,0:21:57.15:0,57,1485	0/0:28,0:28:84.29:0,84,2290	0/0:21,0:21:57.20:0,57,1518	1/1:2,26:28:78.27:1511,78,0	1/1:3,14:17:42.14:814,42,0	0/0:31,0:31:90.31:0,90,2465	0/0:23,0:23:66.20:0,66,1727	0/0:26,0:26:75.26:0,75,2009	0/0:28,0:28:78.27:0,78,2111	0/0:18,0:18:51.17:0,51,1340	0/0:39,0:38:99:0,111,3000	0/0:26,0:26:78.27:0,78,2136	1/1:3,11:14:30.10:581,30,0	0/0:26,0:26:72.23:0,72,1848	0/0:22,0:22:63.22:0,63,1726	0/0:18,0:18:54.19:0,54,1480	0/0:30,0:30:87.30:0,87,2375	0/0:28,0:27:84.27:0,84,2205	0/0:15,0:15:42.14:0,42,991
chr10	81465413	.	C	CA	23905.77	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-10.151;DP=663;FS=9.482;HRun=1;HaplotypeScore=58.7444;InbreedingCoeff=0.9890;MQ=75.54;MQ0=0;MQRankSum=-7.220;QD=41.36;ReadPosRankSum=7.783;VQSLOD=3.8102;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,43:44:99:1818,123,0	0/0:4,0:4:12.04:0,12,155	0/0:23,0:23:60.13:0,60,742	0/0:21,0:20:53.90:0,54,599	1/1:0,29:29:87.29:1304,87,0	1/1:0,19:19:48.16:719,48,0	1/1:1,21:22:60.20:899,60,0	0/0:37,0:37:99:0,105,1340	1/1:0,18:18:51.17:765,51,0	1/1:0,30:30:90.26:1288,90,0	1/1:0,11:11:30.02:399,30,0	1/1:1,22:23:60.20:900,60,0	1/1:1,31:32:90.30:1337,90,0	1/1:0,18:18:51.17:764,51,0	1/1:0,30:30:84.28:1259,84,0	1/1:0,20:20:57.19:855,57,0	1/1:2,30:32:84.28:1259,84,0	1/1:2,21:23:63.21:944,63,0	1/1:2,17:19:51.15:741,51,0	1/1:0,21:21:60.17:875,60,0	1/1:0,27:27:75.25:1124,75,0	1/1:1,29:30:84.28:1259,84,0	1/1:1,21:22:51.17:765,51,0	1/1:0,24:24:69.23:1033,69,0	1/1:1,17:18:48.16:720,48,0	1/1:0,29:29:87.26:1261,87,0	1/1:0,31:30:90.30:1349,90,0	1/1:0,6:6:18.06:270,18,0
chr10	81466462	.	CATGTATAGGGCTAGGCATGA	C	50147.87	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=10.316;DP=561;FS=3.137;HRun=0;HaplotypeScore=344.0994;InbreedingCoeff=0.9201;MQ=83.28;MQ0=0;MQRankSum=-11.773;QD=100.90;ReadPosRankSum=6.721;VQSLOD=3.2999;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,13:18:24.08:1256,24,0	0/0:14,0:14:42.14:0,42,3658	0/0:21,0:21:57.20:0,57,3961	0/0:28,0:28:80.53:0,81,4670	1/1:6,17:23:45.47:1742,45,0	1/1:5,22:27:57.20:3143,57,0	1/1:3,13:16:27.09:1440,27,0	1/1:9,10:19:30.10:1185,30,0	1/1:6,12:18:36.12:2039,36,0	1/1:5,20:25:60.20:3256,60,0	1/1:4,15:19:45.11:2038,45,0	1/1:3,13:16:39.13:2143,39,0	1/1:3,17:20:45.15:2549,45,0	1/1:3,22:25:63.22:3524,63,0	1/1:3,16:19:42.14:2379,42,0	1/1:5,26:31:72.25:4078,72,0	1/1:5,8:13:15.48:701,15,0	1/1:3,4:7:6.02:273,6,0	1/1:4,9:13:27.07:1049,27,0	1/1:6,20:26:60.03:2705,60,0	1/1:10,15:25:18.02:826,18,0	1/1:5,25:30:69.24:3355,69,0	1/1:6,20:26:54.19:2753,54,0	1/1:2,8:10:5.98:190,6,0	1/1:2,16:18:39.13:2032,39,0	1/1:6,20:26:60.20:2945,60,0	1/1:10,17:27:45.15:2548,45,0	./.
chr10	81467575	.	G	GTGTGTGTGTA	6377.09	PASS	AB=1.000;AC=35;AF=0.648;AN=54;BaseQRankSum=-3.142;DP=671;FS=0.555;HRun=0;HaplotypeScore=172.7718;InbreedingCoeff=0.3447;MQ=50.20;MQ0=17;MQRankSum=-1.686;QD=13.80;ReadPosRankSum=3.951;VQSLOD=3.8549;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:9.03:0,9,189	0/0:15,0:15:36.08:0,36,855	0/0:29,0:13:17.16:0,17,205	0/0:35,0:15:23.95:0,24,217	1/1:11,24:39:3:151,3,0	0/0:32,0:31:2.76:0,3,24	0/1:23,0:22:66.49:66,0,81	0/0:39,0:38:67.54:0,68,491	0/1:26,0:25:16.88:17,0,28	1/1:10,20:30:6.15:531,6,0	1/1:8,10:18:9.03:444,9,0	./.	0/1:12,0:12:65.15:65,0,88	0/1:18,0:18:57.86:68,0,58	1/1:4,19:24:18.06:735,18,0	1/1:4,13:19:4.05:613,4,0	1/1:27,0:26:11.40:531,11,0	1/1:4,8:12:3.90:153,4,0	1/1:20,0:17:0.40:174,0,0	1/1:3,14:19:3.01:151,3,0	1/1:33,0:32:35.95:408,36,0	0/1:23,0:21:26.53:27,0,83	0/0:17,0:17:2.99:0,3,24	1/1:23,0:21:6.89:82,7,0	1/1:10,20:34:12.04:492,12,0	1/1:7,10:20:13.13:326,13,0	1/1:3,19:28:21.25:1041,21,0	1/1:0,5:9:6.02:303,6,0
chr10	81467583	.	GTA	G	454.40	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=-1.402;DP=645;FS=1.177;HRun=0;HaplotypeScore=129.9225;InbreedingCoeff=0.3557;MQ=53.62;MQ0=15;MQRankSum=-0.227;QD=1.63;ReadPosRankSum=-3.571;VQSLOD=1.5194;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:9.01:115,9,0	0/0:14,0:14:21.30:0,21,547	0/0:31,0:17:0.46:0,0,231	0/1:34,0:18:15.90:16,0,211	0/1:37,0:36:3.79:4,0,159	1/1:34,0:33:14.96:124,15,0	0/0:18,0:17:30.01:0,30,294	0/1:37,0:37:73.64:74,0,518	1/1:26,0:25:2.67:128,3,0	0/0:28,0:28:54.61:0,55,480	0/0:15,0:15:14.76:0,15,132	1/1:11,0:11:5.84:43,6,0	0/0:13,0:13:21:0,21,195	0/0:17,0:17:17.99:0,18,161	0/0:23,0:23:17.88:0,18,203	0/1:19,0:19:12.61:13,0,148	0/0:27,0:25:22.26:0,22,365	0/1:11,0:11:23.93:24,0,25	0/0:21,0:18:31.42:0,31,476	0/0:20,0:19:20.04:0,20,126	0/0:29,0:27:28.47:0,28,436	0/0:21,0:20:23.23:0,23,179	1/1:17,0:17:3.46:25,3,0	0/1:24,0:22:6.81:55,0,7	0/0:34,0:34:31.87:0,32,278	0/0:15,0:15:38.47:0,38,373	0/0:31,0:31:22.03:0,22,324	0/0:9,0:9:6.02:0,6,71
chr10	81467585	.	A	ATG	701.16	PASS	AB=0.918;AC=21;AF=0.389;AN=54;BaseQRankSum=9.453;DP=634;FS=4.529;HRun=0;HaplotypeScore=130.8795;InbreedingCoeff=0.3169;MQ=54.56;MQ0=15;MQRankSum=-4.520;QD=2.09;ReadPosRankSum=1.158;VQSLOD=2.4732;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:8.10:0,8,34	0/0:14,0:14:36.11:0,36,445	0/0:32,0:17:36.77:0,37,412	0/0:30,0:17:39.35:0,39,427	0/1:35,0:34:78.06:84,0,78	0/1:14,17:30:0:0,0,0	0/0:17,0:16:23.21:0,23,269	0/0:37,0:37:54.29:0,54,711	1/1:11,14:24:6.02:85,6,0	0/1:27,0:27:7.96:8,0,275	0/1:13,0:14:22.60:67,0,23	./.	0/0:14,0:14:11.81:0,12,167	0/0:17,0:17:11.41:0,11,134	1/1:22,0:22:17.77:126,18,0	0/1:18,0:18:19.11:94,0,19	0/0:27,0:25:17.92:0,18,178	1/1:11,0:11:3.45:22,3,0	0/0:23,0:20:0.81:0,1,339	1/1:20,0:19:11.22:58,11,0	0/0:26,0:25:38.60:0,39,411	0/0:21,0:20:13.49:0,13,214	0/1:10,9:19:0:0,0,0	1/1:21,4:23:14.71:156,15,0	0/1:35,0:35:18.94:19,0,124	0/1:13,0:13:0.86:1,0,189	0/1:32,0:32:99:104,0,117	1/1:9,0:9:5.97:44,6,0
chr10	81468742	.	CTG	C	4196.10	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-1.761;DP=701;FS=2.338;HRun=0;HaplotypeScore=106.6870;InbreedingCoeff=0.9984;MQ=79.74;MQ0=2;MQRankSum=-1.291;QD=37.80;ReadPosRankSum=2.758;VQSLOD=5.8558;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,2427	0/0:16,0:16:48.16:0,48,899	0/0:20,0:20:54.02:0,54,883	0/0:16,0:16:38.19:0,38,612	0/0:30,0:30:87.30:0,87,1629	1/1:0,21:20:54.18:795,54,0	0/0:30,0:30:87.30:0,87,1629	0/0:29,0:29:87.30:0,87,1630	1/1:2,22:24:63.21:928,63,0	0/0:28,0:28:72.25:0,72,1344	0/0:19,0:19:57.20:0,57,1067	1/1:0,20:20:51.17:751,51,0	0/0:31,0:31:90.31:0,90,1686	0/0:44,0:44:99:0,126,2309	0/0:27,0:27:81.28:0,81,1517	0/0:22,0:22:19.03:0,19,1070	0/0:28,0:28:81.28:0,81,1494	0/0:17,0:17:48.16:0,48,899	0/0:17,0:17:48.16:0,48,888	0/0:30,0:30:84.29:0,84,1573	0/0:38,0:38:99:0,114,2094	0/0:30,0:30:90.31:0,90,1673	1/1:2,21:22:51.17:750,51,0	1/1:0,23:23:66.22:972,66,0	0/0:17,0:17:51.17:0,51,940	0/0:18,0:18:51.17:0,51,948	0/0:25,0:25:72.25:0,72,1348	0/0:12,0:12:36.12:0,36,674
chr10	81468982	.	C	CT	15300.27	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-14.069;DP=671;FS=6.186;HRun=6;HaplotypeScore=60.8065;InbreedingCoeff=0.9937;MQ=80.07;MQ0=0;MQRankSum=-2.436;QD=30.54;ReadPosRankSum=2.404;VQSLOD=5.5940;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,41:44:99:1374,111,0	0/0:16,0:16:45.10:0,45,459	0/0:20,0:20:11.94:0,12,322	0/0:24,0:22:36.82:0,37,393	1/1:5,27:32:78.07:923,78,0	0/0:26,0:26:69.14:0,69,696	1/1:3,22:25:54.17:679,54,0	1/1:4,21:25:63.10:700,63,0	0/0:22,0:22:60.12:0,60,603	1/1:2,26:28:78.20:938,78,0	1/1:1,19:20:48.15:599,48,0	0/0:18,0:18:42.08:0,42,422	1/1:6,13:19:51.15:622,51,0	1/1:3,24:27:57.18:717,57,0	1/1:2,26:28:61.45:857,61,0	1/1:1,19:20:51.16:642,51,0	1/1:0,19:19:51.16:642,51,0	1/1:1,9:10:21.07:264,21,0	1/1:1,21:22:57.17:695,57,0	1/1:3,42:45:99:1434,123,0	1/1:1,14:15:42.13:528,42,0	1/1:2,21:24:48.15:599,48,0	0/0:24,0:24:63.06:0,63,618	0/0:20,0:20:51.06:0,51,499	1/1:2,21:23:54.17:679,54,0	1/1:3,29:32:87.22:1051,87,0	1/1:2,30:32:84.27:1056,84,0	1/1:3,8:11:24.08:302,24,0
chr10	81469447	.	AC	A	2888.99	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.946;DP=632;FS=0.000;HRun=4;HaplotypeScore=60.4897;InbreedingCoeff=0.9908;MQ=80.38;MQ0=0;MQRankSum=-0.414;QD=30.09;ReadPosRankSum=1.265;VQSLOD=3.7229;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,120,1660	0/0:8,0:8:24.03:0,24,298	0/0:23,0:23:63.57:0,64,804	0/0:11,0:11:12.01:0,12,332	0/0:33,0:33:96.08:0,96,1256	0/0:18,0:18:54.18:0,54,755	1/1:2,25:27:63.19:756,63,0	0/0:27,0:27:78.25:0,78,1077	0/0:22,0:22:60.20:0,60,839	0/0:27,0:27:81.25:0,81,1079	0/0:23,0:22:66.19:0,66,888	0/0:19,0:19:54.15:0,54,719	1/1:1,19:20:57.17:675,57,0	1/1:0,21:21:60.18:720,60,0	0/0:21,0:21:63.19:0,63,849	0/0:20,0:20:60.18:0,60,822	0/0:29,0:29:87.27:0,87,1184	0/0:20,0:20:60.20:0,60,835	0/0:20,0:20:57.16:0,57,751	0/0:21,0:21:54.17:0,54,729	0/0:17,0:17:51.17:0,51,714	1/1:1,27:28:75.23:899,75,0	0/0:23,0:23:66.18:0,66,865	0/0:13,0:13:39.12:0,39,529	0/0:27,0:27:75.20:0,75,979	0/0:21,0:21:60.20:0,60,840	0/0:25,0:24:75.20:0,75,995	0/0:23,0:23:66.13:0,66,897
chr10	81469799	.	C	CAT	4747.80	PASS	AB=0.964;AC=30;AF=0.536;AN=56;BaseQRankSum=-2.321;DP=446;FS=8.666;HRun=0;HaplotypeScore=111.6022;InbreedingCoeff=0.1524;MQ=48.42;MQ0=31;MQRankSum=3.603;QD=14.34;ReadPosRankSum=1.892;VQSLOD=4.4975;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:15:6.75:371,7,0	0/0:6,0:6:11.97:0,12,136	0/0:29,0:9:20.44:0,20,211	0/1:40,0:15:15.55:16,0,259	1/1:15,0:15:14.71:236,15,0	0/0:24,0:22:11.04:0,11,172	1/1:12,0:12:24.55:322,25,0	0/1:37,0:34:99:496,0,236	0/0:20,0:17:20.15:0,20,238	0/1:16,0:16:99:349,0,137	1/1:20,0:19:27.05:288,27,0	0/0:6,0:5:6.02:0,6,92	0/1:10,0:9:65.41:112,0,65	1/1:13,0:13:28.10:304,28,0	1/1:15,0:13:16.76:217,17,0	1/1:13,0:12:14.78:242,15,0	0/1:5,5:8:38.76:74,0,39	0/1:9,0:6:53.75:169,0,54	0/1:12,0:12:33.40:246,0,33	0/1:15,0:11:5.30:132,0,5	1/1:12,0:11:24.10:356,24,0	0/1:21,0:21:0.90:170,0,1	0/0:14,0:13:15.04:0,15,203	0/0:16,0:13:8.92:0,9,121	1/1:12,0:12:13.71:215,14,0	0/1:12,0:9:23.40:231,0,23	0/1:10,1:11:1.94:116,0,2	0/1:7,0:6:39.44:86,0,39
chr10	81470379	.	T	TTCTCATTC	1015.70	PASS	AB=1.000;AC=25;AF=0.625;AN=40;BaseQRankSum=1.957;DP=185;FS=0.000;HRun=0;HaplotypeScore=51.2681;InbreedingCoeff=0.3083;MQ=23.38;MQ0=15;MQRankSum=-1.036;QD=7.10;ReadPosRankSum=-0.148;VQSLOD=1.1896;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:5:3.01:53,3,0	./.	./.	./.	0/1:11,0:6:0:0,0,0	0/1:7,0:2:0:0,0,0	1/1:7,0:5:7.21:75,7,0	0/0:3,0:2:3.11:0,3,8	./.	1/1:17,0:10:18.85:244,19,0	0/1:10,0:1:0:0,0,0	1/1:4,0:1:1.82:5,2,0	./.	./.	0/1:11,0:5:9.64:83,0,10	./.	0/0:2,0:1:0.47:0,0,1	0/0:1,0:1:2.04:0,2,6	1/1:1,4:6:17.83:299,18,0	0/1:12,0:7:17.76:32,0,18	1/1:6,1:7:3.41:19,3,0	1/1:18,0:9:8.51:110,9,0	0/1:4,0:1:0:0,0,0	0/0:10,0:5:5.91:0,6,67	./.	1/1:10,0:4:6:106,6,0	0/1:4,0:3:0:0,0,0	1/1:8,0:6:6.02:94,6,0
chr10	81470383	.	C	CAT	435.14	PASS	AB=0.920;AC=11;AF=0.289;AN=38;BaseQRankSum=1.993;DP=201;FS=15.115;HRun=0;HaplotypeScore=40.2034;InbreedingCoeff=-0.1040;MQ=23.66;MQ0=20;MQRankSum=-1.349;QD=4.35;ReadPosRankSum=2.184;VQSLOD=0.2428;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,5:5:3.01:36,3,0	0/0:5,0:3:2.96:0,3,20	./.	./.	0/0:10,1:6:0.45:0,0,1	0/0:8,0:3:2.96:0,3,19	0/1:7,0:5:24.75:25,0,40	0/0:4,0:2:3.63:0,4,10	./.	0/1:17,1:11:92.75:126,0,93	0/1:9,1:1:0:0,0,0	0/0:4,0:1:3:0,3,26	./.	./.	0/1:10,1:5:39.88:49,0,40	./.	0/0:3,0:2:2.67:0,3,35	./.	0/1:7,0:6:17.37:136,0,17	0/0:11,1:7:6.19:0,6,92	0/0:10,0:8:2.57:0,3,10	1/1:19,0:10:6.02:72,6,0	./.	0/0:10,0:5:1.42:0,1,44	./.	0/1:10,1:5:36.46:48,0,36	0/0:3,1:3:2.88:0,3,15	0/1:6,3:6:9.06:52,0,9
chr10	81470473	.	CTCTCTCTCTCTCTCT	C	1122.35	PASS	AB=0.920;AC=16;AF=0.296;AN=54;BaseQRankSum=5.086;DP=306;FS=46.320;HRun=0;HaplotypeScore=137.5664;InbreedingCoeff=-0.3356;MQ=30.12;MQ0=35;MQRankSum=-4.628;QD=6.80;ReadPosRankSum=5.318;VQSLOD=0.8461;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:13:9.67:10,0,70	0/0:5,0:5:12.01:0,12,217	./.	0/0:4,0:2:6.02:0,6,77	0/1:12,0:11:38.96:39,0,97	0/0:12,0:9:12.51:0,13,227	0/0:9,0:8:1.75:0,2,4	0/0:9,0:3:8.63:0,9,48	0/0:5,0:4:6.02:0,6,106	0/1:13,0:12:99:251,0,234	0/1:7,0:7:40.10:43,0,40	0/0:13,0:7:5.89:0,6,42	0/1:9,5:13:75.74:269,0,76	0/1:2,4:5:6.01:42,0,6	0/0:20,0:16:7.71:0,8,209	0/1:15,0:9:54.24:54,0,102	0/1:7,0:6:28.17:28,0,131	0/1:7,0:4:47.13:47,0,93	0/1:9,0:9:70.76:118,0,71	0/1:11,0:11:30.63:31,0,197	0/0:23,0:18:14.76:0,15,129	1/1:4,3:7:0.56:99,1,0	0/0:9,0:5:6.02:0,6,90	0/0:22,0:17:6.02:0,6,76	0/0:8,0:7:15.81:0,16,171	0/1:10,0:10:77.45:77,0,214	0/1:16,0:12:77.45:77,0,241	0/1:4,0:4:35.23:83,0,35
chr10	81470477	.	CTCTCTCTCTCT	C	1306.42	PASS	AB=0.876;AC=17;AF=0.315;AN=54;BaseQRankSum=4.889;DP=325;FS=48.954;HRun=0;HaplotypeScore=130.7795;InbreedingCoeff=-0.3569;MQ=31.74;MQ0=36;MQRankSum=-4.145;QD=6.77;ReadPosRankSum=5.522;VQSLOD=0.4608;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:15:4.08:4,0,75	0/0:5,0:5:12.04:0,12,228	./.	0/0:5,0:2:6.02:0,6,75	0/1:9,3:11:51.46:69,0,51	0/0:14,0:10:15.05:0,15,199	0/0:11,0:10:8.71:0,9,63	0/0:10,0:3:8.63:0,9,48	0/0:6,0:5:9.03:0,9,137	0/1:10,4:12:99:345,0,143	0/1:4,4:8:6.51:76,0,7	0/0:14,0:8:8.44:0,8,65	0/1:15,0:14:99:183,0,112	0/1:7,0:6:9.82:10,0,40	0/1:13,8:17:27.07:27,0,51	0/1:14,2:9:79.56:80,0,90	0/1:9,0:8:22.47:22,0,133	0/1:6,1:4:49.67:72,0,50	0/1:8,2:9:69.61:132,0,70	0/1:8,3:10:58.16:58,0,125	0/0:23,0:17:14.68:0,15,103	1/1:7,0:7:0.76:72,1,0	0/0:9,0:5:6.02:0,6,82	0/0:24,0:18:9.03:0,9,113	0/0:8,1:8:12.34:0,12,95	0/1:9,2:10:99:131,0,158	0/1:15,1:12:99:105,0,174	0/1:4,0:4:34.84:71,0,35
chr10	81470515	.	T	TAC	1679.33	PASS	AB=0.824;AC=10;AF=0.179;AN=56;BaseQRankSum=-1.747;DP=459;FS=23.163;HRun=0;HaplotypeScore=136.7751;InbreedingCoeff=0.7484;MQ=45.28;MQ0=13;MQRankSum=0.324;QD=15.27;ReadPosRankSum=-1.949;VQSLOD=1.6284;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:21:33.10:0,33,406	0/0:6,0:6:9.03:0,9,111	0/0:37,0:13:26.42:0,26,279	0/1:28,0:14:0.53:1,0,269	0/0:14,0:14:18.01:0,18,204	0/0:15,0:12:21.07:0,21,259	1/1:6,16:22:36.12:573,36,0	1/1:6,11:17:30.05:427,30,0	0/0:9,0:8:15.05:0,15,183	0/0:17,0:17:42.12:0,42,494	0/0:12,0:12:8.99:0,9,94	0/0:14,0:10:8.88:0,9,111	1/1:10,11:20:30.10:461,30,0	0/1:5,6:9:7.66:135,0,8	0/0:23,0:19:29.92:0,30,341	0/0:18,0:11:18.06:0,18,221	0/0:22,0:22:20.25:0,20,353	0/0:6,0:6:15.03:0,15,178	0/0:16,0:13:30.07:0,30,355	0/0:13,0:13:17.97:0,18,187	0/0:25,0:24:24.06:0,24,293	1/1:3,8:11:15.05:244,15,0	0/0:11,0:11:24.03:0,24,278	0/0:19,0:16:9.03:0,9,111	0/0:12,0:12:12.04:0,12,148	0/0:14,0:13:28.93:0,29,338	0/0:15,0:14:30.08:0,30,355	0/0:5,0:5:12.04:0,12,148
chr10	81470564	.	TCACACACA	T	240.54	PASS	AB=0.926;AC=19;AF=0.396;AN=48;BaseQRankSum=3.177;DP=414;FS=7.425;HRun=0;HaplotypeScore=135.8214;InbreedingCoeff=0.3149;MQ=55.82;MQ0=11;MQRankSum=-0.336;QD=1.82;ReadPosRankSum=1.795;VQSLOD=1.6003;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:0:0,0,0	0/0:3,0:3:3.01:0,3,126	0/0:48,0:22:4.65:0,5,374	0/0:34,0:18:27.09:0,27,654	./.	1/1:10,2:10:3.01:70,3,0	./.	0/1:17,0:17:14.22:14,0,41	1/1:1,5:7:3.01:76,3,0	0/1:14,0:14:72.82:78,0,73	1/1:8,0:8:1.55:4,2,0	1/1:8,6:13:2.48:37,2,0	1/1:11,0:10:2.94:18,3,0	./.	0/0:12,0:8:9.03:0,9,151	1/1:13,0:9:0.47:1,0,0	0/0:25,0:25:8.04:0,8,104	0/0:5,0:5:5.90:0,6,84	0/0:14,0:13:10.32:0,10,114	1/1:7,0:9:3.48:55,3,0	0/0:21,0:21:2.99:0,3,23	1/1:9,0:8:1.95:12,2,0	0/1:10,4:14:0:0,0,0	./.	0/0:12,0:12:1.25:0,1,3	0/0:7,0:7:0.47:0,0,1	0/0:9,0:8:6.47:0,6,85	0/0:6,0:5:3.01:0,3,56
chr10	81470566	.	ACACACACACACACACACACACACACATATG	A	2244.29	PASS	AC=26;AF=0.650;AN=40;BaseQRankSum=-0.510;DP=414;FS=10.621;HRun=0;HaplotypeScore=219.4160;InbreedingCoeff=0.5066;MQ=52.93;MQ0=15;MQRankSum=2.983;QD=14.29;ReadPosRankSum=4.707;VQSLOD=1.4855;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:3,0:3:3.01:0,3,346	0/0:46,0:20:11.96:0,12,143	0/0:34,0:18:15.05:0,15,332	./.	0/0:14,0:11:0.47:0,0,1	./.	1/1:17,0:16:11.38:85,11,0	0/0:8,0:8:3.01:0,3,37	1/1:8,6:14:9.44:731,9,0	1/1:3,5:8:3.01:177,3,0	0/0:14,0:13:0.47:0,0,1	1/1:11,0:10:3.01:32,3,0	./.	1/1:12,0:8:3:25,3,0	1/1:12,0:9:3.01:78,3,0	1/1:24,0:24:8.99:349,9,0	1/1:5,0:5:6.01:87,6,0	1/1:13,0:13:17.98:264,18,0	1/1:12,0:9:6.02:320,6,0	./.	./.	./.	0/0:25,0:22:2.90:0,3,194	1/1:12,0:12:5.75:78,6,0	1/1:8,0:7:8.99:103,9,0	1/1:9,0:8:3.01:43,3,0	./.
chr10	81470578	.	A	ATAAG	716.07	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=-1.749;DP=357;FS=0.000;HRun=0;HaplotypeScore=104.7838;InbreedingCoeff=0.4005;MQ=45.04;MQ0=18;MQRankSum=0.509;QD=13.77;ReadPosRankSum=0.416;VQSLOD=2.6169;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:19:0:0,0,0	0/0:3,0:3:3.01:0,3,63	0/0:38,0:13:39:0,39,682	0/0:30,0:14:42.14:0,42,858	0/0:16,0:16:3.01:0,3,61	0/0:11,0:10:6:0,6,78	1/1:11,0:13:3.48:37,3,0	1/1:10,8:13:14.09:598,14,0	0/0:11,0:10:3.01:0,3,33	0/0:9,0:9:27.07:0,27,372	./.	0/0:15,0:15:8.98:0,9,115	0/1:11,0:10:16.67:63,0,17	0/0:6,0:7:0:0,0,0	0/0:6,0:3:9.03:0,9,170	0/0:10,0:8:5.99:0,6,83	0/0:20,0:20:18.05:0,18,283	0/0:5,0:5:12.01:0,12,180	0/0:11,0:10:30.10:0,30,522	0/0:11,0:8:6.02:0,6,80	0/0:20,0:19:3.01:0,3,62	1/1:10,0:9:8.66:142,9,0	0/0:11,0:11:11.99:0,12,152	0/0:21,0:20:2.75:0,3,57	0/0:10,0:10:3.01:0,3,37	0/0:6,0:5:12.03:0,12,169	0/0:5,0:5:9.03:0,9,180	0/0:2,0:1:3.01:0,3,55
chr10	81470584	.	A	ATATG	61.54	PASS	AB=0.917;AC=13;AF=0.250;AN=52;BaseQRankSum=1.492;DP=340;FS=0.000;HRun=0;HaplotypeScore=101.6153;InbreedingCoeff=0.3469;MQ=42.70;MQ0=20;MQRankSum=0.758;QD=0.66;ReadPosRankSum=-0.711;VQSLOD=1.6642;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:0:0,0,0	0/0:3,0:3:3.01:0,3,63	0/0:34,0:10:4.96:0,5,331	0/0:26,0:9:27.09:0,27,544	./.	1/1:10,0:10:3.01:71,3,0	1/1:13,0:13:0.92:2,1,0	0/0:20,0:14:36.07:0,36,511	1/1:11,0:10:2.99:24,3,0	0/0:8,0:8:24.06:0,24,306	1/1:7,0:7:2.97:20,3,0	0/1:12,2:14:31.27:31,0,56	0/0:11,0:11:5.91:0,6,90	./.	0/0:6,0:3:9.03:0,9,160	0/0:9,0:7:2.98:0,3,22	0/0:20,0:19:18.15:0,18,226	0/0:4,0:4:9.02:0,9,160	0/0:8,0:7:21.06:0,21,362	0/0:11,0:8:6.02:0,6,79	0/0:19,0:18:2.99:0,3,23	0/1:10,0:9:7.79:8,0,8	0/1:6,1:7:0:0,0,0	1/1:20,1:20:3.48:29,3,0	0/0:10,0:10:2.75:0,3,37	0/0:5,0:4:9.03:0,9,144	0/0:4,0:4:9.01:0,9,143	0/0:2,0:1:3.01:0,3,56
chr10	81470590	.	ACATATG	A	1665.30	PASS	AB=1.000;AC=33;AF=0.688;AN=48;BaseQRankSum=0.000;DP=330;FS=2.836;HRun=0;HaplotypeScore=90.3955;InbreedingCoeff=0.2220;MQ=41.47;MQ0=22;MQRankSum=1.413;QD=8.58;ReadPosRankSum=2.813;VQSLOD=1.7810;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:4:3.01:0,3,53	0/0:26,0:7:1.11:0,1,76	0/0:23,0:7:4.01:0,4,213	./.	./.	0/0:13,0:13:1.83:0,2,3	0/1:22,0:13:70.23:70,0,275	1/1:11,0:10:3.01:49,3,0	1/1:8,0:8:23.11:376,23,0	1/1:6,0:6:3.01:34,3,0	1/1:16,0:16:2.65:24,3,0	0/1:12,0:11:15.06:44,0,15	0/0:9,0:8:4.07:0,4,12	1/1:6,0:3:3:25,3,0	1/1:8,0:7:3.01:52,3,0	1/1:18,0:17:14.59:207,15,0	1/1:4,0:4:6.02:100,6,0	1/1:8,0:7:18.06:306,18,0	1/1:11,0:8:6.02:94,6,0	1/1:18,0:16:3.01:45,3,0	1/1:7,0:6:4.35:59,4,0	0/0:7,0:7:0:0,0,0	1/1:21,0:20:2.79:19,3,0	0/1:9,0:9:0.48:46,0,0	1/1:5,0:4:9.03:179,9,0	1/1:4,0:4:3.01:61,3,0	./.
chr10	81470592	.	ATATG	A	1759.83	PASS	AB=0.732;AC=33;AF=0.688;AN=48;BaseQRankSum=-0.490;DP=323;FS=3.856;HRun=0;HaplotypeScore=84.8275;InbreedingCoeff=0.2722;MQ=41.76;MQ0=23;MQRankSum=1.872;QD=9.21;ReadPosRankSum=2.644;VQSLOD=2.2839;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:4:3.01:0,3,52	0/0:28,0:8:3.78:0,4,119	0/0:25,0:7:4.01:0,4,213	./.	./.	0/0:6,6:12:3.27:0,3,8	0/1:23,0:14:46.39:46,0,347	1/1:10,2:11:6.02:110,6,0	1/1:7,0:8:23.10:342,23,0	1/1:5,0:5:3.01:34,3,0	1/1:11,4:15:2.90:25,3,0	0/1:6,6:11:15.08:44,0,15	0/0:6,2:7:4.07:0,4,12	1/1:4,0:1:3:25,3,0	1/1:1,6:6:3.01:52,3,0	1/1:2,16:17:14.59:207,15,0	1/1:3,0:3:6.02:100,6,0	1/1:1,7:7:18.06:306,18,0	1/1:8,3:8:6.01:80,6,0	1/1:2,16:16:3.01:45,3,0	1/1:6,1:6:4.35:59,4,0	0/0:4,3:7:0:0,0,0	1/1:20,2:21:5.92:107,6,0	0/1:1,8:9:0.48:46,0,0	1/1:1,5:5:12.02:203,12,0	1/1:3,0:3:3.01:61,3,0	./.
chr10	81470596	.	G	GCACA	697.81	PASS	AB=1.000;AC=29;AF=0.580;AN=50;BaseQRankSum=-0.298;DP=376;FS=4.652;HRun=0;HaplotypeScore=123.3301;InbreedingCoeff=0.3042;MQ=40.93;MQ0=23;MQRankSum=1.077;QD=3.17;ReadPosRankSum=-1.570;VQSLOD=1.5321;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:0:0,0,0	0/0:4,0:4:2.94:0,3,18	0/0:28,0:8:3.01:0,3,45	0/0:25,0:7:6:0,6,58	1/1:22,0:22:4.03:25,4,0	./.	1/1:10,2:13:3.46:72,3,0	0/0:26,0:16:20.89:0,21,250	1/1:12,0:11:3.01:61,3,0	0/1:9,0:9:10.12:10,0,24	1/1:7,0:7:3.93:13,4,0	0/0:14,1:16:2.70:0,3,27	1/1:9,1:11:2.72:12,3,0	./.	./.	1/1:10,0:9:5.93:68,6,0	0/1:23,0:22:6.92:41,0,7	0/1:4,0:4:0:0,0,0	1/1:10,0:9:2.97:20,3,0	0/0:14,0:11:3:0,3,28	1/1:24,0:22:8.32:70,8,0	1/1:9,0:8:11.87:206,12,0	0/0:7,0:7:0:0,0,0	1/1:23,0:22:6:83,6,0	0/0:10,0:10:0:0,0,0	1/1:8,0:7:8.95:66,9,0	1/1:6,0:6:5.92:65,6,0	0/1:5,0:4:15.56:21,0,16
chr10	81470809	.	CTTT	C	8117.35	PASS	AB=0.611;AC=39;AF=0.696;AN=56;BaseQRankSum=-5.050;DP=468;FS=3.365;HRun=14;HaplotypeScore=77.2814;InbreedingCoeff=0.8941;MQ=68.72;MQ0=0;MQRankSum=-0.705;QD=22.80;ReadPosRankSum=3.178;VQSLOD=4.3109;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:22:33.11:0,33,475	0/0:6,0:6:15.05:0,15,282	0/0:13,0:10:18:0,18,231	0/0:11,0:11:8.06:0,8,86	1/1:5,25:30:63:734,63,0	0/0:4,0:19:26.91:0,27,224	1/1:7,6:14:17.87:193,18,0	1/1:20,0:33:33.91:200,34,0	0/0:3,0:12:21.83:0,22,178	1/1:6,11:18:35.94:404,36,0	1/1:0,17:15:42.12:491,42,0	0/0:5,0:9:14.94:0,15,114	1/1:3,14:17:36.04:421,36,0	1/1:2,28:31:75.06:843,75,0	1/1:2,8:10:21.03:245,21,0	1/1:0,20:22:57.04:632,57,0	1/1:4,8:12:20.98:245,21,0	1/1:1,5:6:12.03:140,12,0	1/1:2,17:19:51.13:596,51,0	1/1:5,14:16:39.04:439,39,0	1/1:3,8:11:20.96:230,21,0	1/1:0,10:10:30.09:347,30,0	0/0:4,0:18:34.95:0,35,337	0/1:4,0:11:10.98:11,0,138	1/1:1,13:15:25.62:313,26,0	1/1:6,20:26:60.05:690,60,0	1/1:3,18:21:51.12:594,51,0	1/1:0,13:13:30.07:351,30,0
chr10	81472663	.	GTT	G	13106.73	PASS	AB=0.550;AC=49;AF=0.875;AN=56;BaseQRankSum=-4.038;DP=562;FS=0.000;HRun=11;HaplotypeScore=73.2307;InbreedingCoeff=0.7927;MQ=72.15;MQ0=2;MQRankSum=-2.890;QD=24.68;ReadPosRankSum=2.799;VQSLOD=4.7951;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:23:32.91:144,33,0	0/0:4,0:4:12.04:0,12,185	0/0:12,0:13:9.48:0,9,143	0/0:13,0:11:16.24:0,16,169	1/1:2,22:24:66.16:701,66,0	1/1:0,28:28:63.16:671,63,0	1/1:4,5:9:12:128,12,0	1/1:5,28:33:77.18:868,77,0	1/1:1,14:15:36.08:383,36,0	1/1:0,12:12:36.09:383,36,0	1/1:1,27:29:69.02:731,69,0	1/1:0,12:12:36.09:383,36,0	1/1:2,22:24:63.15:665,63,0	1/1:0,20:20:57.14:607,57,0	1/1:4,16:20:42.08:447,42,0	1/1:1,17:18:45.11:479,45,0	1/1:3,23:25:63.14:670,63,0	0/1:4,16:22:26.12:309,0,26	1/1:5,24:29:75.11:771,75,0	1/1:3,26:29:69.13:734,69,0	1/1:3,18:21:35.90:438,36,0	1/1:2,20:22:54.10:575,54,0	1/1:2,9:12:21:279,21,0	1/1:0,15:15:39.10:415,39,0	1/1:1,13:14:36.09:383,36,0	1/1:5,23:29:62.82:699,63,0	1/1:2,33:34:90.21:956,90,0	1/1:0,9:9:27.07:287,27,0
chr10	81473360	.	TCTC	T	5436.98	PASS	AB=0.835;AC=37;AF=0.661;AN=56;BaseQRankSum=1.327;DP=663;FS=35.377;HRun=0;HaplotypeScore=103.1860;InbreedingCoeff=0.6700;MQ=56.32;MQ0=30;MQRankSum=-1.168;QD=12.22;ReadPosRankSum=2.306;VQSLOD=2.6366;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:41:69.41:0,69,1006	0/0:5,0:5:3.01:0,3,60	0/0:42,0:11:8.94:0,9,115	0/0:46,0:15:14.65:0,15,198	1/1:13,3:16:13.29:137,13,0	0/0:15,0:20:18.02:0,18,202	1/1:10,11:20:13.46:206,13,0	1/1:18,7:23:21.01:252,21,0	0/0:17,0:22:22.33:0,22,213	1/1:24,7:29:38.55:460,39,0	1/1:25,2:27:8.94:103,9,0	0/0:7,0:11:15.03:0,15,178	1/1:11,5:16:12.04:166,12,0	1/1:7,7:13:9.41:238,9,0	1/1:11,5:16:30.09:396,30,0	1/1:13,7:20:24.08:332,24,0	1/1:21,4:23:35.76:425,36,0	0/1:9,3:12:38.48:172,0,38	1/1:23,7:26:29.90:370,30,0	1/1:17,3:18:9.03:124,9,0	1/1:37,1:36:9.60:349,10,0	1/1:25,1:24:9.01:124,9,0	0/0:22,0:22:17.49:0,17,192	0/1:14,0:15:14.14:14,0,59	1/1:13,7:20:16.65:283,17,0	1/1:17,11:28:48.06:587,48,0	0/1:11,8:19:10.79:343,0,11	1/1:13,12:25:27.07:354,27,0
chr10	81473397	.	TTCC	T	6047.02	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=7.379;DP=560;FS=4.523;HRun=0;HaplotypeScore=89.8278;InbreedingCoeff=0.9260;MQ=47.29;MQ0=55;MQRankSum=-1.931;QD=19.76;ReadPosRankSum=4.046;VQSLOD=4.0109;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,29:38:35.95:494,36,0	0/0:7,0:5:12.04:0,12,246	0/0:48,0:5:11.87:0,12,197	0/0:42,0:3:6.02:0,6,112	1/1:11,3:14:29.88:403,30,0	0/0:13,0:11:18.06:0,18,346	0/0:21,0:19:30.09:0,30,537	0/0:16,0:14:18.06:0,18,358	0/0:14,0:12:30.06:0,30,527	1/1:4,20:21:57.16:784,57,0	1/1:3,9:11:15.01:194,15,0	0/0:17,0:17:39.07:0,39,746	0/0:9,0:9:24.04:0,24,363	0/0:14,0:13:21.06:0,21,361	1/1:4,7:11:15.05:211,15,0	1/1:10,10:19:26.99:343,27,0	1/1:8,13:20:11.96:168,12,0	1/1:10,4:13:0.59:85,1,0	1/1:11,15:21:51.07:653,51,0	1/1:2,7:9:15.01:194,15,0	1/1:13,21:33:26.11:484,26,0	0/0:18,0:15:27.09:0,27,552	0/0:17,0:12:24.05:0,24,476	0/0:17,0:15:18.04:0,18,324	1/1:2,14:15:18.06:261,18,0	1/1:5,22:27:69.23:994,69,0	1/1:7,11:17:21.07:305,21,0	1/1:15,3:18:35.90:475,36,0
chr10	81474003	.	A	AATT	1741.06	PASS	AB=0.550;AC=7;AF=0.125;AN=56;BaseQRankSum=7.245;DP=555;FS=3.617;HRun=0;HaplotypeScore=112.2185;InbreedingCoeff=0.1762;MQ=77.93;MQ0=0;MQRankSum=-4.125;QD=13.50;ReadPosRankSum=3.430;VQSLOD=2.9099;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:51:36.25:417,0,36	0/0:7,0:7:21.04:0,21,324	0/0:19,0:17:0.09:0,0,359	0/0:15,0:16:35.56:0,36,511	0/0:31,0:31:67.49:0,67,1397	0/1:4,1:23:21.23:391,0,21	0/0:14,0:14:27.97:0,28,350	0/0:5,0:39:99:0,115,1272	0/1:2,0:15:2.58:335,0,3	0/0:18,0:18:54.17:0,54,955	0/0:21,0:21:63.19:0,63,1084	1/1:2,0:11:3.51:257,4,0	0/0:11,0:11:21.91:0,22,293	0/0:17,0:17:50.90:0,51,466	0/0:26,0:26:78.20:0,78,1278	0/0:11,0:12:35.98:0,36,552	0/0:24,0:24:72.19:0,72,1211	0/0:11,0:12:29.68:0,30,509	0/0:28,0:29:87.12:0,87,1304	0/0:29,0:29:87.26:0,87,1488	0/0:13,0:13:39.11:0,39,644	0/0:17,0:17:50.82:0,51,458	0/1:2,0:15:28.45:306,0,28	0/1:3,0:14:13.81:162,0,14	0/0:24,0:24:72.20:0,72,1172	0/0:19,0:19:57.18:0,57,975	0/0:15,0:15:45.15:0,45,804	0/0:13,0:13:36.12:0,36,651
chr10	81474046	.	GC	G	1460.47	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.119;DP=592;FS=10.269;HRun=2;HaplotypeScore=93.4962;InbreedingCoeff=0.9796;MQ=90.71;MQ0=0;MQRankSum=-5.221;QD=26.55;ReadPosRankSum=1.241;VQSLOD=2.3284;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,51:55:99:1555,120,0	0/0:7,0:7:21.07:0,21,315	0/0:26,0:26:75.18:0,75,1049	0/0:23,0:23:63.21:0,63,939	0/0:29,0:29:87.28:0,87,1284	0/0:12,0:12:30.09:0,30,431	0/0:17,0:17:51.13:0,51,739	0/0:33,0:33:96.30:0,96,1401	0/0:17,0:17:48.16:0,48,718	0/0:28,0:28:81.27:0,81,1197	0/0:22,0:22:66.17:0,66,909	0/0:15,0:15:42.14:0,42,629	0/0:16,0:16:45.14:0,45,652	0/0:21,0:21:63.21:0,63,930	0/0:19,0:19:57.19:0,57,854	0/0:18,0:18:54.18:0,54,809	0/0:21,0:21:63.21:0,63,943	0/0:6,0:6:18.06:0,18,269	0/0:23,0:23:63.21:0,63,939	0/0:32,0:32:93.30:0,93,1361	0/0:21,0:21:61.45:0,61,902	0/0:27,0:27:81.26:0,81,1177	0/0:18,0:18:51.01:0,51,741	0/0:8,0:8:18.06:0,18,270	0/0:22,0:22:63.19:0,63,905	0/0:22,0:22:60.19:0,60,881	0/0:22,0:22:66.22:0,66,988	0/0:12,0:12:33.10:0,33,476
chr10	81474484	.	A	AGAG	2755.30	PASS	AB=0.764;AC=7;AF=0.125;AN=56;BaseQRankSum=7.733;DP=754;FS=20.476;HRun=0;HaplotypeScore=174.3912;InbreedingCoeff=0.2991;MQ=64.65;MQ0=4;MQRankSum=-0.698;QD=15.48;ReadPosRankSum=1.157;VQSLOD=1.9181;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:63.39:85,0,63	0/0:7,0:7:18.06:0,18,335	0/0:26,0:18:35.66:0,36,594	0/0:32,0:24:52.53:0,53,704	0/0:28,0:28:67.40:0,67,494	0/0:27,0:27:81.20:0,81,1402	0/1:14,5:19:7.47:280,0,7	0/0:20,0:20:52.38:0,52,288	0/0:31,0:31:90.31:0,90,1584	0/0:31,0:31:88.94:0,89,574	0/0:17,0:17:11.43:0,11,217	0/0:33,0:33:96.31:0,96,1694	0/1:16,14:32:2.08:731,0,2	0/1:15,11:34:49.82:755,0,50	0/0:25,0:25:43.11:0,43,465	0/1:19,0:31:99:378,0,101	0/0:39,0:39:99:0,109,812	0/0:16,0:16:43.59:0,44,286	0/0:26,0:26:13.13:0,13,325	0/0:31,0:31:35.98:0,36,563	0/0:35,0:35:91.33:0,91,628	1/1:12,12:26:15.95:663,16,0	0/0:27,0:27:81.22:0,81,1406	0/0:38,0:38:99:0,108,1832	0/0:17,0:17:21.22:0,21,280	0/0:36,0:35:67.05:0,67,532	0/0:20,0:20:32.84:0,33,444	0/0:14,0:14:38.33:0,38,283
chr10	81475367	.	CTT	C	8206.98	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=7.819;DP=537;FS=4.629;HRun=10;HaplotypeScore=106.8137;InbreedingCoeff=0.9698;MQ=73.83;MQ0=0;MQRankSum=-1.792;QD=29.10;ReadPosRankSum=2.269;VQSLOD=4.9635;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:24:47.90:0,48,177	0/0:10,0:10:30.09:0,30,455	0/0:19,0:18:32.12:0,32,395	0/0:9,0:10:17.55:0,18,234	1/1:2,18:20:54.13:602,54,0	0/0:2,0:22:47.41:0,47,163	0/0:1,1:17:2:0,2,78	0/0:5,0:29:65.85:0,66,252	0/0:0,0:21:44.92:0,45,154	1/1:3,27:30:81.20:894,81,0	1/1:2,25:27:74.99:836,75,0	0/0:2,0:10:20.47:0,20,86	0/0:2,0:17:25.21:0,25,91	0/0:2,0:17:36.18:0,36,123	1/1:1,20:21:57.15:635,57,0	1/1:0,17:17:51.14:569,51,0	1/1:1,15:16:45.12:502,45,0	1/1:2,8:10:27.05:290,27,0	1/1:3,16:19:48.12:535,48,0	1/1:6,22:28:63.16:702,63,0	1/1:1,11:12:30.07:334,30,0	0/0:2,0:26:60.59:0,61,234	0/0:1,0:19:39.93:0,40,137	0/0:1,0:12:30.44:0,30,118	1/1:3,22:25:66.17:736,66,0	1/1:3,17:20:48.10:535,48,0	1/1:1,20:21:54.15:602,54,0	1/1:3,13:16:39.05:435,39,0
chr10	81475604	.	GTC	G	509.58	PASS	AB=1.000;AC=14;AF=0.269;AN=52;BaseQRankSum=1.323;DP=469;FS=0.000;HRun=0;HaplotypeScore=71.0170;InbreedingCoeff=0.4341;MQ=76.17;MQ0=17;MQRankSum=2.035;QD=4.63;ReadPosRankSum=1.413;VQSLOD=1.5545;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:2.73:0,3,23	0/0:10,0:10:6:0,6,52	./.	0/0:36,0:19:0:0,0,0	0/1:14,0:14:17.04:17,0,110	1/1:13,3:16:9.02:96,9,0	1/1:8,1:9:14.87:142,15,0	0/0:25,0:25:3.01:0,3,36	./.	0/0:13,0:13:8.98:0,9,80	0/0:16,0:15:5.93:0,6,49	1/1:7,3:10:3:32,3,0	0/0:16,0:16:20.99:0,21,208	1/1:9,0:9:6:64,6,0	0/0:10,0:10:9.01:0,9,88	0/0:12,0:11:8.22:0,8,63	1/1:26,0:25:23.85:226,24,0	0/0:11,0:11:3:0,3,25	0/0:16,0:17:6:0,6,54	0/0:9,0:9:5.96:0,6,55	0/0:15,0:18:5.99:0,6,48	0/1:13,0:11:23.91:54,0,24	0/0:13,0:13:3.01:0,3,42	1/1:12,1:13:2.79:31,3,0	0/0:19,0:18:5.99:0,6,49	0/0:20,0:20:22.79:0,23,221	0/0:22,0:22:14.95:0,15,120	0/0:20,0:19:6.02:0,6,72
chr10	81475650	.	C	CTCTT	4799.20	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=-5.574;DP=439;FS=15.417;HRun=0;HaplotypeScore=90.9727;InbreedingCoeff=0.4707;MQ=62.89;MQ0=14;MQRankSum=-1.020;QD=15.14;ReadPosRankSum=-1.610;VQSLOD=3.0552;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:17:27.52:28,0,83	0/1:7,0:7:3.15:3,0,84	0/0:30,0:10:16.63:0,17,123	0/0:38,0:14:13.21:0,13,141	0/1:18,0:18:35.93:185,0,36	0/0:21,0:20:46.21:0,46,409	0/1:11,0:11:22.79:128,0,23	1/1:19,0:19:53.92:471,54,0	0/0:8,0:8:17.55:0,18,130	1/1:14,0:14:36:415,36,0	1/1:20,0:20:47.96:418,48,0	0/0:10,0:9:14.99:0,15,134	0/1:20,0:20:22.71:384,0,23	0/1:12,0:12:16.92:108,0,17	1/1:4,0:19:11.91:143,12,0	1/1:15,0:14:37.16:335,37,0	1/1:20,0:19:3.68:144,4,0	1/1:1,5:6:3.01:81,3,0	1/1:12,0:11:25.79:209,26,0	1/1:8,0:8:21.88:187,22,0	1/1:12,0:13:23.97:253,24,0	1/1:13,0:12:10.64:215,11,0	0/0:8,0:8:17.90:0,18,147	0/0:7,0:6:11.99:0,12,111	1/1:2,0:16:3:25,3,0	1/1:22,0:22:40.47:521,40,0	1/1:4,12:18:15.40:217,15,0	1/1:15,0:15:27.99:330,28,0
chr10	81482086	.	TA	T	987.78	PASS	AB=0.967;AC=36;AF=0.643;AN=56;BaseQRankSum=2.474;DP=231;FS=1.375;HRun=13;HaplotypeScore=41.1562;InbreedingCoeff=0.3237;MQ=55.88;MQ0=12;MQRankSum=2.864;QD=5.95;ReadPosRankSum=3.347;VQSLOD=1.3549;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:8:11.48:0,11,62	0/1:3,1:4:12.90:13,0,49	0/0:14,2:6:6.83:0,7,36	0/0:5,0:2:0:0,0,0	1/1:10,0:9:14.06:61,14,0	1/1:2,7:9:11.93:87,12,0	0/0:2,0:4:2.96:0,3,19	0/0:12,0:17:34.56:0,35,217	1/1:2,3:5:8.91:66,9,0	1/1:13,0:13:0.80:56,1,0	1/1:14,0:12:1.31:41,1,0	1/1:1,5:6:14.90:109,15,0	0/0:1,0:7:11.36:0,11,57	0/0:1,0:5:8.52:0,9,43	1/1:2,1:3:4.20:25,4,0	0/1:7,0:7:3.09:43,0,3	0/1:8,0:8:11.56:55,0,12	0/1:7,0:6:18.08:22,0,18	1/1:7,0:7:13.58:54,14,0	0/1:10,0:8:11.44:38,0,11	1/1:6,0:6:11.08:52,11,0	0/1:0,0:6:8.76:9,0,19	1/1:0,9:8:20.76:144,21,0	1/1:1,3:4:4.54:26,5,0	1/1:6,0:6:12.92:51,13,0	1/1:11,0:10:14.59:72,15,0	1/1:12,0:11:18.70:77,19,0	1/1:9,0:9:1.38:58,1,0
chr10	81482098	.	AAC	A	656.03	PASS	AB=0.990;AC=23;AF=0.411;AN=56;BaseQRankSum=1.821;DP=258;FS=0.717;HRun=0;HaplotypeScore=52.0712;InbreedingCoeff=0.4029;MQ=67.04;MQ0=9;MQRankSum=2.783;QD=4.43;ReadPosRankSum=3.209;VQSLOD=1.8742;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:7.21:0,7,33	0/0:4,0:4:8.95:0,9,122	0/1:29,0:12:8.28:8,0,180	0/0:15,0:7:0.40:0,0,67	1/1:9,0:8:4.68:34,5,0	0/0:9,0:9:17.28:0,17,96	0/0:9,0:9:2.96:0,3,19	0/0:22,0:20:50.47:0,50,603	0/0:4,0:4:8.52:0,9,42	0/1:13,0:13:8.41:107,0,8	0/1:12,1:13:0.15:82,0,0	0/0:5,0:5:14.20:0,14,70	0/0:8,0:8:12.04:0,12,146	0/0:5,0:5:11.95:0,12,117	1/1:2,1:3:5.58:50,6,0	1/1:6,2:8:0.54:106,1,0	0/1:9,0:9:1.80:47,0,2	0/1:6,0:5:9:34,0,9	1/1:7,1:8:13.50:108,13,0	0/1:9,0:8:7.20:39,0,7	1/1:6,0:6:9:29,9,0	0/0:7,0:7:14.94:0,15,147	0/0:10,0:9:22.69:0,23,116	0/0:5,0:5:5.83:0,6,38	1/1:6,0:6:14.67:58,15,0	1/1:9,0:9:2.88:40,3,0	1/1:11,0:10:16.57:54,17,0	0/1:9,0:9:0.90:34,0,1
chr10	81482099	.	AC	A	2816.12	PASS	AB=0.984;AC=32;AF=0.593;AN=54;BaseQRankSum=-2.468;DP=251;FS=10.397;HRun=3;HaplotypeScore=41.1446;InbreedingCoeff=0.7310;MQ=67.84;MQ0=8;MQRankSum=0.799;QD=18.41;ReadPosRankSum=2.265;VQSLOD=2.1834;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:7.43:29,7,0	0/0:4,0:4:6.91:0,7,78	0/1:29,1:13:4.47:4,0,178	0/0:15,0:7:0.38:0,0,67	1/1:0,9:8:20.98:238,21,0	0/0:9,0:9:9.46:0,9,49	./.	0/0:22,0:20:45.82:0,46,440	0/1:3,0:3:0.63:1,0,1	1/1:2,11:13:24.12:359,24,0	1/1:6,6:12:26.74:235,27,0	0/0:5,0:5:4.37:0,4,11	0/0:8,0:8:11.93:0,12,89	0/0:6,0:6:14.42:0,14,99	1/1:2,0:2:2.74:17,3,0	1/1:4,4:8:20.89:198,21,0	1/1:3,6:9:16.28:204,16,0	1/1:3,3:5:6.50:127,7,0	1/1:4,4:8:23.93:231,24,0	1/1:3,5:8:17.31:223,17,0	1/1:0,6:6:12.04:146,12,0	0/0:6,0:6:11.20:0,11,70	0/0:10,0:9:11.86:0,12,48	0/0:5,0:5:3.88:0,4,26	1/1:1,5:6:18.01:204,18,0	1/1:1,8:9:26.97:273,27,0	1/1:3,7:10:21.07:258,21,0	1/1:2,7:9:21.07:258,21,0
chr10	81482160	.	AC	A	3934.36	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.585;DP=266;FS=24.434;HRun=2;HaplotypeScore=67.4762;InbreedingCoeff=0.7176;MQ=64.48;MQ0=5;MQRankSum=-3.247;QD=17.72;ReadPosRankSum=3.462;VQSLOD=2.3791;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:10.05:56,10,0	0/0:1,0:1:3.01:0,3,42	0/0:26,0:12:25.25:0,25,150	0/0:17,0:9:3.44:0,3,61	1/1:8,0:8:23.93:189,24,0	1/1:13,0:13:27.10:169,27,0	1/1:10,0:10:5.99:48,6,0	1/1:8,0:8:18:158,18,0	1/1:6,0:6:8.73:34,9,0	1/1:10,1:11:26.99:233,27,0	1/1:12,0:12:35.72:267,36,0	1/1:8,0:8:14.91:109,15,0	1/1:7,1:8:17.95:143,18,0	1/1:9,0:9:26.89:212,27,0	1/1:6,0:6:14.96:120,15,0	1/1:10,1:11:20.72:172,21,0	1/1:10,0:11:32.65:229,33,0	1/1:3,0:3:9:79,9,0	1/1:10,0:10:24:209,24,0	1/1:9,0:9:23.91:189,24,0	1/1:4,0:4:5.99:50,6,0	1/1:7,0:7:14.96:119,15,0	1/1:10,1:11:27.64:186,28,0	1/1:9,0:9:14.47:70,14,0	1/1:7,0:7:20.93:166,21,0	1/1:10,1:11:32.97:282,33,0	1/1:14,0:14:32.92:267,33,0	1/1:10,0:10:20.98:177,21,0
chr10	81482161	.	CCAAAAAAA	C	7764.05	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=0.674;DP=272;FS=77.563;HRun=0;HaplotypeScore=83.7283;InbreedingCoeff=0.8170;MQ=64.02;MQ0=5;MQRankSum=-4.325;QD=43.62;ReadPosRankSum=5.004;VQSLOD=1.6962;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:21.07:0,21,567	0/0:1,0:1:3.01:0,3,137	0/0:27,0:12:27.90:0,28,462	0/0:17,0:9:12.75:0,13,86	1/1:2,5:8:24.05:489,24,0	0/0:13,0:13:37.01:0,37,1001	1/1:0,0:10:6.02:130,6,0	1/1:0,0:8:21.50:268,21,0	0/0:7,0:7:21.07:0,21,601	1/1:6,5:11:29.97:529,30,0	1/1:3,8:12:35.84:566,36,0	0/1:9,0:9:34.91:35,0,234	1/1:1,0:8:18.06:388,18,0	1/1:5,1:9:26.96:390,27,0	1/1:0,6:6:15.05:399,15,0	1/1:3,8:11:20.85:450,21,0	1/1:8,2:11:32.83:446,33,0	1/1:2,1:3:9.01:134,9,0	1/1:1,8:10:30.02:444,30,0	1/1:1,5:9:23.85:494,24,0	1/1:3,1:4:2.54:79,3,0	1/1:3,0:7:15.04:283,15,0	0/0:11,0:11:28.58:0,29,724	0/0:9,0:9:27.09:0,27,732	1/1:3,4:7:21.03:385,21,0	1/1:6,3:11:33.04:565,33,0	1/1:1,11:14:33.10:792,33,0	1/1:1,8:10:21.06:497,21,0
chr10	81482762	.	AATTCT	A	1764.99	PASS	AB=0.583;AC=9;AF=0.161;AN=56;BaseQRankSum=-1.432;DP=506;FS=5.048;HRun=0;HaplotypeScore=115.8248;InbreedingCoeff=0.9418;MQ=75.67;MQ0=4;MQRankSum=2.736;QD=27.15;ReadPosRankSum=-0.411;VQSLOD=2.9493;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:60.20:0,60,973	0/0:8,0:8:24.08:0,24,416	0/0:23,0:20:43.38:0,43,730	0/0:27,0:18:20.86:0,21,268	0/0:27,0:27:60.18:0,60,964	1/1:5,0:5:12.04:219,12,0	0/0:15,0:15:39.13:0,39,667	0/0:27,0:26:57.19:0,57,1012	1/1:18,0:18:47.82:758,48,0	0/0:28,0:28:78.26:0,78,1458	0/0:19,0:19:47.99:0,48,676	1/1:14,0:14:27.09:469,27,0	0/0:12,0:12:36.11:0,36,580	0/0:18,0:18:48.16:0,48,927	0/0:19,0:19:45.14:0,45,730	0/0:20,0:20:55.42:0,55,903	0/0:17,0:17:42.08:0,42,600	0/0:8,0:8:17.52:0,18,221	0/0:17,0:17:38.16:0,38,633	0/0:26,0:26:66.17:0,66,1053	0/0:25,0:25:54.18:0,54,903	0/0:12,0:12:30.10:0,30,537	0/1:4,10:14:0:0,0,0	1/1:14,0:14:27.09:475,27,0	0/0:17,0:16:42.72:0,43,615	0/0:18,0:18:44.64:0,45,741	0/0:15,0:15:36.37:0,36,528	0/0:11,0:11:23.47:0,23,266
chr10	81483544	.	ACCCAT	A	13402.31	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=3.874;DP=430;FS=0.000;HRun=0;HaplotypeScore=127.7429;InbreedingCoeff=0.8939;MQ=63.64;MQ0=2;MQRankSum=-8.425;QD=36.62;ReadPosRankSum=3.791;VQSLOD=4.5749;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,16:21:32.19:552,32,0	0/0:10,0:10:30.09:0,30,797	0/0:31,0:29:45.06:0,45,973	0/0:21,0:18:18.97:0,19,678	1/1:4,23:27:57.15:1018,57,0	1/1:3,11:14:33.11:618,33,0	1/1:2,12:14:20.94:288,21,0	1/1:8,10:18:30.05:502,30,0	1/1:2,13:15:33.11:625,33,0	1/1:8,11:19:33.11:625,33,0	1/1:3,12:15:36.08:630,36,0	1/1:2,12:14:30.10:571,30,0	1/1:4,8:12:24.04:420,24,0	1/1:2,12:14:36.12:686,36,0	1/1:2,14:16:42.14:800,42,0	1/1:2,13:15:30.10:571,30,0	1/1:2,3:5:6.02:114,6,0	1/1:0,4:4:12.04:228,12,0	1/1:6,13:19:38.89:587,39,0	1/1:3,17:20:45.02:739,45,0	1/1:6,8:14:12:187,12,0	1/1:2,13:15:39.13:743,39,0	1/1:2,19:21:51.09:881,51,0	1/1:1,5:6:12.04:228,12,0	1/1:3,15:18:42.01:669,42,0	1/1:1,11:12:33.11:626,33,0	1/1:3,11:14:21.07:380,21,0	1/1:2,2:4:6.02:114,6,0
chr10	81484328	.	G	GT	1759.89	PASS	AB=0.950;AC=13;AF=0.232;AN=56;BaseQRankSum=-8.103;DP=474;FS=0.500;HRun=9;HaplotypeScore=52.6000;InbreedingCoeff=0.8709;MQ=77.93;MQ0=0;MQRankSum=-0.103;QD=17.60;ReadPosRankSum=-0.416;VQSLOD=3.4168;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:18:30.55:0,31,90	0/0:8,0:8:24:0,24,208	0/1:17,1:15:31.75:32,0,83	0/0:21,0:16:8.30:0,8,132	0/0:22,0:22:56.96:0,57,491	1/1:1,11:12:27.07:299,27,0	0/0:0,0:7:14.26:0,14,42	1/1:5,13:18:39.08:415,39,0	1/1:4,16:20:13.05:372,13,0	0/0:22,0:22:44.95:0,45,391	0/0:31,0:31:80.98:0,81,703	1/1:2,13:15:30.08:332,30,0	0/0:1,0:13:22.41:0,22,66	0/0:2,0:12:18.32:0,18,54	0/0:24,0:24:53.98:0,54,466	0/0:11,0:11:29.98:0,30,256	0/0:22,0:22:53.98:0,54,469	0/0:18,0:18:44.96:0,45,385	0/0:15,0:15:29.97:0,30,256	0/0:30,0:30:89.94:0,90,771	0/0:10,0:10:26.97:0,27,230	0/0:0,0:9:18.33:0,18,54	1/1:1,10:11:30.08:332,30,0	1/1:0,5:5:15.04:166,15,0	0/0:11,0:11:29.99:0,30,260	0/0:22,0:22:56:0,56,472	0/0:34,0:33:89.92:0,90,773	0/0:14,0:14:20.97:0,21,182
chr10	81484503	.	TTTGAA	T	472.58	PASS	AB=0.844;AC=2;AF=0.036;AN=56;BaseQRankSum=6.093;DP=526;FS=3.926;HRun=0;HaplotypeScore=137.2839;InbreedingCoeff=-0.0376;MQ=100.06;MQ0=0;MQRankSum=5.887;QD=8.29;ReadPosRankSum=-1.932;VQSLOD=1.8598;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.16:0,48,1580	0/0:6,0:6:18.06:0,18,549	0/1:18,9:27:99:478,0,1462	0/1:27,2:30:83.32:83,0,1765	0/0:27,0:27:81.28:0,81,2624	0/0:22,0:22:66.23:0,66,2132	0/0:7,0:7:21.06:0,21,627	0/0:28,0:28:81.26:0,81,2492	0/0:18,0:18:54.19:0,54,1775	0/0:20,0:20:60.21:0,60,1945	0/0:27,0:27:81.28:0,81,2694	0/0:10,0:10:30.10:0,30,957	0/0:18,0:18:54.19:0,54,1758	0/0:21,0:21:63.22:0,63,2046	0/0:17,0:17:51.18:0,51,1697	0/0:19,0:19:57.20:0,57,1840	0/0:10,0:10:30.08:0,30,889	0/0:14,0:14:42.14:0,42,1365	0/0:18,0:18:54.19:0,54,1793	0/0:33,0:33:96.33:0,96,3172	0/0:12,0:12:36.12:0,36,1174	0/0:14,0:14:42.14:0,42,1324	0/0:22,0:22:66.23:0,66,2127	0/0:9,0:9:27.09:0,27,900	0/0:17,0:17:51.18:0,51,1699	0/0:28,0:28:84.29:0,84,2797	0/0:25,0:25:75.26:0,75,2464	0/0:10,0:10:30.10:0,30,969
chr10	81485413	.	CAGAGAGAGAGAGAGAGAGAGAGAGAG	C	2283.96	PASS	AB=0.757;AC=6;AF=0.115;AN=52;BaseQRankSum=5.125;DP=500;FS=5.083;HRun=0;HaplotypeScore=292.2058;InbreedingCoeff=0.1549;MQ=43.78;MQ0=14;MQRankSum=-4.447;QD=22.61;ReadPosRankSum=0.741;VQSLOD=1.9149;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:0.93:0,1,2	0/0:7,0:7:11.07:0,11,709	./.	./.	0/0:25,0:26:31.15:0,31,2220	0/1:18,6:26:22.40:591,0,22	0/0:18,0:15:1.36:0,1,3	0/0:19,0:21:15.52:0,16,416	0/1:14,3:22:36.88:1022,0,37	0/0:27,0:25:54.19:0,54,4463	0/0:20,0:20:20.21:0,20,1568	0/1:14,1:16:45.32:353,0,45	1/1:10,0:11:6.02:283,6,0	0/0:11,0:13:6.49:0,6,285	0/0:17,0:17:27.04:0,27,1876	0/0:25,0:26:41.41:0,41,3227	0/0:18,0:18:29.03:0,29,1479	0/0:14,0:14:12.04:0,12,630	0/0:11,0:11:18.06:0,18,1063	0/0:24,0:23:26.26:0,26,1198	0/0:7,0:5:6.02:0,6,464	0/0:13,0:19:3.01:0,3,131	0/1:13,7:22:15.60:153,0,16	0/0:15,0:17:2.59:0,3,17	0/0:20,0:19:21.02:0,21,1612	0/0:23,0:23:42.02:0,42,2633	0/0:18,0:25:27.09:0,27,1907	0/0:5,0:5:7.84:0,8,390
chr10	81485702	.	CTGATAT	C	18213.75	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=11.266;DP=465;FS=5.329;HRun=0;HaplotypeScore=188.8028;InbreedingCoeff=0.9150;MQ=89.71;MQ0=0;MQRankSum=-11.549;QD=44.97;ReadPosRankSum=6.751;VQSLOD=4.1435;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:15:36.12:814,36,0	0/0:9,0:9:27.09:0,27,888	0/0:26,0:26:69.24:0,69,2123	0/0:24,0:25:65.65:0,66,1912	1/1:5,5:10:15.05:339,15,0	1/1:6,18:24:54.19:1222,54,0	1/1:10,11:21:33.11:739,33,0	1/1:14,13:27:39.13:882,39,0	1/1:3,19:22:54.19:1214,54,0	1/1:3,11:14:33.11:727,33,0	1/1:3,10:13:27.09:611,27,0	1/1:5,13:18:39.13:883,39,0	1/1:9,12:21:36.12:812,36,0	1/1:6,14:20:48.15:1023,48,0	1/1:6,17:23:54.17:1179,54,0	1/1:5,11:16:33.11:747,33,0	1/1:3,7:10:15.05:339,15,0	1/1:0,4:4:12.04:271,12,0	1/1:6,8:14:24.08:543,24,0	1/1:5,17:22:51.18:1154,51,0	1/1:8,8:16:21.07:446,21,0	1/1:5,8:13:27.05:547,27,0	1/1:5,7:12:24.07:502,24,0	1/1:11,5:16:20.62:433,21,0	1/1:3,12:15:36.12:815,36,0	1/1:5,20:25:60.18:1293,60,0	1/1:4,9:13:27.09:611,27,0	1/1:0,1:1:3.01:68,3,0
chr10	81485843	.	TA	T	9000.46	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=8.970;DP=528;FS=4.321;HRun=1;HaplotypeScore=83.3054;InbreedingCoeff=0.9618;MQ=74.51;MQ0=0;MQRankSum=-5.206;QD=38.30;ReadPosRankSum=2.580;VQSLOD=5.5890;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,1837	0/0:14,0:14:42.14:0,42,671	0/0:23,0:23:69.02:0,69,1035	0/0:20,0:20:60.19:0,60,899	1/1:0,29:29:78.14:1089,78,0	0/0:23,0:23:66.21:0,66,1030	0/0:15,1:16:6.21:0,6,651	0/0:18,0:18:54.16:0,54,802	0/0:15,0:15:45.14:0,45,694	1/1:2,14:16:45.15:629,45,0	1/1:1,16:17:51.17:704,51,0	0/0:13,0:13:39.12:0,39,601	0/0:16,0:16:45.04:0,45,660	0/0:17,0:17:42.14:0,42,667	1/1:2,10:12:33.11:460,33,0	1/1:2,15:17:3.21:618,3,0	1/1:1,23:24:62.70:860,63,0	1/1:0,9:9:27.09:377,27,0	1/1:1,20:21:57.15:770,57,0	1/1:1,21:22:66.22:920,66,0	1/1:1,17:18:42.13:571,42,0	0/0:21,0:21:60.19:0,60,936	0/0:32,0:32:96.33:0,96,1519	0/0:24,0:24:69.24:0,69,1102	1/1:1,13:14:42.08:548,42,0	1/1:3,16:19:57.13:743,57,0	1/1:0,11:11:33.11:461,33,0	1/1:0,6:6:18.06:251,18,0
chr10	81485905	.	A	AT	11491.36	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=14.495;DP=533;FS=7.433;HRun=2;HaplotypeScore=107.8212;InbreedingCoeff=0.9611;MQ=97.02;MQ0=0;MQRankSum=-9.691;QD=34.61;ReadPosRankSum=2.254;VQSLOD=4.5716;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,42:44:99:1726,120,0	0/0:9,0:9:27.08:0,27,335	0/0:28,0:28:72.18:0,72,846	0/0:32,0:32:79.42:0,79,934	1/1:0,13:13:26.92:295,27,0	0/0:25,0:25:69.20:0,69,842	1/1:2,18:20:57.19:815,57,0	0/0:25,0:25:69.21:0,69,846	0/0:23,0:23:66.21:0,66,818	1/1:2,9:11:30.10:413,30,0	1/1:4,6:10:18.05:241,18,0	0/0:11,0:11:33.10:0,33,408	1/1:2,17:19:54.15:751,54,0	1/1:4,15:19:51.11:689,51,0	1/1:2,11:13:36.11:498,36,0	1/1:2,13:15:4.93:504,5,0	1/1:6,18:24:54.08:708,54,0	1/1:1,2:3:6.02:86,6,0	1/1:5,17:23:63.17:864,63,0	1/1:3,23:26:68.86:770,69,0	1/1:4,11:15:18.06:259,18,0	1/1:1,16:17:48.08:643,48,0	0/0:22,0:22:63.20:0,63,780	0/0:26,0:26:69.20:0,69,842	1/1:2,11:13:36.11:501,36,0	1/1:0,19:19:57.19:819,57,0	1/1:5,12:16:36.07:477,36,0	1/1:1,10:11:30.10:432,30,0
chr10	81485962	.	G	GT	15350.25	PASS	AB=0.556;AC=37;AF=0.661;AN=56;BaseQRankSum=8.525;DP=562;FS=0.691;HRun=1;HaplotypeScore=91.4179;InbreedingCoeff=0.9033;MQ=90.95;MQ0=0;MQRankSum=-12.864;QD=40.83;ReadPosRankSum=3.065;VQSLOD=5.1345;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,29:34:96.23:1362,96,0	0/0:8,0:8:24.06:0,24,297	0/0:28,0:28:71.43:0,71,950	0/0:24,0:24:69.19:0,69,854	1/1:1,18:19:51.16:743,51,0	0/0:29,0:29:84.19:0,84,1028	1/1:1,18:19:51.13:737,51,0	0/0:27,0:27:75.22:0,75,948	0/0:17,0:17:51.15:0,51,647	1/1:1,20:21:60.20:896,60,0	1/1:0,16:16:45.15:673,45,0	0/0:15,0:15:42.12:0,42,530	1/1:1,20:21:60.13:865,60,0	1/1:1,21:22:63.21:943,63,0	1/1:2,17:19:51.13:738,51,0	0/1:4,16:20:62.68:620,0,63	1/1:1,16:17:51.17:754,51,0	1/1:0,6:6:18.06:269,18,0	1/1:2,25:27:81.23:1187,81,0	1/1:3,32:35:99:1505,102,0	1/1:1,20:21:60.14:853,60,0	1/1:2,13:15:33.11:493,33,0	0/0:16,0:16:42.02:0,42,506	0/0:22,0:22:63.20:0,63,818	1/1:2,16:18:48.13:695,48,0	1/1:2,16:18:51.17:763,51,0	1/1:0,26:25:78.26:1166,78,0	1/1:0,2:2:6.02:90,6,0
chr10	81486237	.	CATA	C	17864.16	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=18.202;DP=548;FS=0.694;HRun=0;HaplotypeScore=165.6733;InbreedingCoeff=0.9809;MQ=66.63;MQ0=0;MQRankSum=-17.920;QD=48.94;ReadPosRankSum=1.076;VQSLOD=6.3618;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:57.20:1048,57,0	0/0:8,0:8:24.05:0,24,470	0/0:14,0:14:42.13:0,42,840	0/0:9,0:9:24.08:0,24,526	1/1:0,21:21:54.13:933,54,0	0/0:29,0:29:87.26:0,87,1969	1/1:0,18:18:45.15:828,45,0	0/0:36,0:36:99:0,108,2429	0/0:27,0:27:78.27:0,78,1882	1/1:0,27:27:81.27:1469,81,0	1/1:0,30:30:84.29:1531,84,0	0/0:18,0:18:54.15:0,54,1230	1/1:0,18:18:45.15:834,45,0	1/1:0,25:25:66.23:1218,66,0	1/1:0,27:27:75.26:1369,75,0	1/1:0,18:18:51.17:924,51,0	1/1:0,18:18:45.15:830,45,0	1/1:0,4:4:9.03:167,9,0	1/1:0,18:18:51.12:880,51,0	1/1:0,19:19:54.18:969,54,0	1/1:0,11:11:24.08:422,24,0	1/1:0,18:18:54.19:988,54,0	0/0:28,0:28:84.27:0,84,2019	0/0:14,0:14:42.11:0,42,923	1/1:0,20:20:57.20:1053,57,0	1/1:0,19:19:54.18:960,54,0	1/1:0,26:26:69.24:1275,69,0	1/1:0,3:3:9.03:167,9,0
chr10	81487713	.	AC	A	981.86	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.466;DP=704;FS=2.331;HRun=5;HaplotypeScore=137.2339;InbreedingCoeff=0.9993;MQ=65.34;MQ0=0;MQRankSum=-0.190;QD=29.75;ReadPosRankSum=1.271;VQSLOD=1.8534;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:96.25:1077,96,0	0/0:12,0:12:33.09:0,33,429	0/0:18,0:17:42.12:0,42,546	0/0:18,0:18:36.12:0,36,482	0/0:30,0:30:87.27:0,87,1167	0/0:19,0:19:54.18:0,54,737	0/0:21,0:21:54.16:0,54,718	0/0:29,0:28:75.24:0,75,998	0/0:25,0:25:72.22:0,72,960	0/0:28,0:28:78.24:0,78,1036	0/0:22,0:22:66.19:0,66,868	0/0:27,0:27:78.19:0,78,994	0/0:29,0:29:81.23:0,81,1070	0/0:30,0:30:84.24:0,84,1098	0/0:25,0:24:69.21:0,69,925	0/0:34,0:33:99:0,99,1302	0/0:25,0:25:72.12:0,72,938	0/0:32,0:32:89.81:0,90,1135	0/0:19,0:19:57.19:0,57,779	0/0:28,0:28:84.26:0,84,1117	0/0:34,0:34:96.31:0,96,1294	0/0:24,0:24:72.24:0,72,982	0/0:25,0:25:69.21:0,69,924	0/0:34,0:34:99:0,102,1394	0/0:21,0:21:57.17:0,57,745	0/0:25,0:25:72.13:0,72,959	0/0:25,0:25:56.47:0,56,873	0/0:12,0:12:33.11:0,33,450
chr10	81488283	.	TA	T	775.29	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.699;DP=547;FS=0.733;HRun=6;HaplotypeScore=78.7671;InbreedingCoeff=0.9934;MQ=75.15;MQ0=0;MQRankSum=-1.884;QD=26.73;ReadPosRankSum=-3.926;VQSLOD=2.0447;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.22:0,69,908	0/0:11,0:11:30.10:0,30,392	0/0:12,0:12:24.06:0,24,299	0/0:11,0:11:25.92:0,26,339	0/0:24,0:24:63.20:0,63,827	0/0:27,0:27:72.22:0,72,926	0/0:14,0:14:39.13:0,39,513	1/1:2,27:29:81.20:870,81,0	0/0:12,0:12:36.11:0,36,461	0/0:34,0:34:93.29:0,93,1201	0/0:17,0:17:45.15:0,45,590	0/0:21,0:21:57.19:0,57,750	0/0:29,0:29:84.27:0,84,1102	0/0:17,0:17:51.16:0,51,659	0/0:13,0:13:36.11:0,36,458	0/0:18,0:18:51.15:0,51,656	0/0:18,0:18:54.14:0,54,692	0/0:14,0:14:42.07:0,42,515	0/0:26,0:26:78.18:0,78,986	0/0:25,0:25:66.20:0,66,853	0/0:14,0:14:36.12:0,36,474	0/0:23,0:23:66.21:0,66,866	0/0:17,0:17:48.12:0,48,587	0/0:11,0:11:33.10:0,33,418	0/0:26,0:26:75.24:0,75,972	0/0:22,0:22:57.18:0,57,737	0/0:30,0:30:81.26:0,81,1066	0/0:8,0:8:24.08:0,24,316
chr10	81488983	.	A	AACATCGT	18637.73	PASS	AB=0.971;AC=15;AF=0.268;AN=56;BaseQRankSum=-8.576;DP=718;FS=1.429;HRun=0;HaplotypeScore=154.9931;InbreedingCoeff=0.9067;MQ=79.05;MQ0=0;MQRankSum=-17.248;QD=79.65;ReadPosRankSum=-2.656;VQSLOD=4.7633;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:48.16:1910,48,0	0/0:11,0:11:30.10:0,30,738	0/0:25,0:25:66.23:0,66,1577	0/0:14,0:14:39.11:0,39,917	0/0:28,0:28:84.29:0,84,2180	1/1:9,19:29:69.24:2743,69,0	0/0:18,0:18:48.16:0,48,1235	1/1:25,19:53:99:4976,154,0	1/1:9,21:31:81.28:3176,81,0	0/0:28,0:28:78.27:0,78,1895	0/0:39,0:39:99:0,111,2845	1/1:7,11:21:45.15:1781,45,0	0/0:32,0:32:93.28:0,93,2263	0/0:19,0:19:51.17:0,51,1288	0/0:24,0:24:66.21:0,66,1662	0/0:23,0:23:69.24:0,69,1742	0/0:24,0:24:72.25:0,72,1870	0/0:7,0:7:15.05:0,15,382	0/0:25,0:25:72.24:0,72,1794	0/0:36,0:36:96.33:0,96,2373	0/0:16,0:16:42.14:0,42,1070	0/1:33,1:34:19.94:20,0,2361	1/1:6,20:28:63.08:2503,63,0	1/1:2,14:18:39.61:1528,40,0	0/0:30,0:30:87.28:0,87,2190	0/0:41,0:41:99:0,120,2979	0/0:36,0:35:99:0,102,2513	0/0:8,0:8:24.08:0,24,623
chr10	81489333	.	AG	A	3699.89	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.212;DP=739;FS=0.829;HRun=2;HaplotypeScore=80.5687;InbreedingCoeff=0.9998;MQ=85.31;MQ0=0;MQRankSum=-5.693;QD=33.94;ReadPosRankSum=3.775;VQSLOD=3.9287;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,1773	0/0:10,0:10:30.09:0,30,430	0/0:20,0:20:51.17:0,51,720	0/0:26,0:26:56.19:0,56,990	0/0:27,0:27:81.27:0,81,1211	1/1:0,18:18:42.14:545,42,0	0/0:14,0:14:42.14:0,42,630	0/0:47,0:47:99:0,138,1998	1/1:0,28:28:72.23:935,72,0	0/0:43,0:43:99:0,129,1916	0/0:37,0:37:99:0,108,1619	1/1:0,19:19:57.19:740,57,0	0/0:20,0:20:60.20:0,60,898	0/0:26,0:26:78.26:0,78,1169	0/0:32,0:32:96.30:0,96,1400	0/0:31,0:31:90.30:0,90,1347	0/0:26,0:26:72.24:0,72,1078	0/0:11,0:11:33.09:0,33,465	0/0:19,0:19:57.17:0,57,816	0/0:28,0:28:84.25:0,84,1217	0/0:35,0:35:96.31:0,96,1414	0/0:28,1:29:48.42:0,48,1199	1/1:0,21:21:54.18:700,54,0	1/1:1,22:23:60.19:779,60,0	0/0:27,0:27:81.26:0,81,1195	0/0:36,0:36:99:0,102,1529	0/0:28,0:28:81.27:0,81,1212	0/0:15,0:15:45.15:0,45,674
chr10	81489578	.	GGT	G	4108.76	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.229;DP=699;FS=13.584;HRun=0;HaplotypeScore=88.4895;InbreedingCoeff=0.9926;MQ=83.08;MQ0=0;MQRankSum=-2.121;QD=39.51;ReadPosRankSum=3.602;VQSLOD=5.1761;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,2342	0/0:10,0:10:30.10:0,30,551	0/0:23,0:23:69.24:0,69,1288	0/0:16,0:16:45.02:0,45,799	0/0:22,0:22:60.21:0,60,1106	1/1:0,25:25:69.23:1016,69,0	0/0:27,0:27:81.28:0,81,1499	0/0:29,0:29:87.30:0,87,1613	1/1:0,24:24:66.22:972,66,0	0/0:35,0:35:99:0,99,1791	0/0:33,0:33:96.33:0,96,1773	1/1:1,13:14:39.13:574,39,0	0/0:27,0:27:75.26:0,75,1373	0/0:25,0:25:72.23:0,72,1317	0/0:28,0:28:84.29:0,84,1554	0/0:31,0:31:93.32:0,93,1723	0/0:17,0:17:51.17:0,51,935	0/0:10,0:10:30.10:0,30,562	0/0:29,0:29:84.29:0,84,1555	0/0:19,0:19:54.18:0,54,982	0/0:36,0:36:99:0,108,2023	0/0:27,0:27:81.28:0,81,1481	1/1:0,23:23:60.20:884,60,0	1/1:0,18:18:45.15:663,45,0	0/0:33,0:33:99:0,99,1835	0/0:32,0:32:93.32:0,93,1724	0/0:40,0:39:99:0,120,2248	0/0:4,0:4:12.04:0,12,225
chr10	81492202	.	AG	A	3900.80	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-3.851;DP=597;FS=4.829;HRun=2;HaplotypeScore=78.6184;InbreedingCoeff=0.9861;MQ=89.43;MQ0=0;MQRankSum=-0.184;QD=34.83;ReadPosRankSum=-1.811;VQSLOD=3.2889;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.09:0,75,1049	0/0:8,0:8:24.08:0,24,360	0/0:24,0:24:69.11:0,69,877	0/0:21,0:21:57.18:0,57,780	0/0:30,0:30:90.30:0,90,1331	0/0:28,0:28:81.25:0,81,1172	1/1:1,22:23:63.20:818,63,0	1/1:0,27:27:81.23:1020,81,0	0/0:14,0:14:42.14:0,42,628	0/0:19,0:19:51.17:0,51,745	0/0:25,0:25:75.25:0,75,1112	0/0:18,0:18:54.17:0,54,788	1/1:0,25:25:63.20:818,63,0	1/1:0,17:17:48.16:623,48,0	0/0:22,0:22:66.22:0,66,971	0/0:20,0:20:60.18:0,60,860	0/0:20,0:20:57.19:0,57,850	0/0:17,0:17:48.15:0,48,697	0/0:22,0:22:66.22:0,66,989	0/0:28,0:28:84.28:0,84,1258	0/0:21,0:21:63.21:0,63,942	1/1:0,20:20:53.98:623,54,0	0/0:22,0:22:66.22:0,66,988	0/0:16,0:16:45.12:0,45,633	0/0:22,0:22:63.21:0,63,940	0/0:25,0:25:75.25:0,75,1124	0/0:34,0:34:99:0,102,1505	0/0:3,0:3:9.03:0,9,135
chr10	81492431	.	TA	T	3553.71	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-6.846;DP=530;FS=7.256;HRun=5;HaplotypeScore=73.0837;InbreedingCoeff=0.9972;MQ=72.03;MQ0=0;MQRankSum=1.063;QD=30.37;ReadPosRankSum=-1.549;VQSLOD=3.5330;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.15:0,45,616	0/0:9,0:9:27.09:0,27,369	0/0:8,0:8:22.23:0,22,227	0/0:7,0:7:21.07:0,21,274	0/0:22,0:22:62.98:0,63,814	0/0:26,0:26:75.25:0,75,1026	1/1:1,15:16:39.11:442,39,0	1/1:2,36:38:99:1206,108,0	0/0:13,0:13:36.12:0,36,492	0/0:18,0:18:51.16:0,51,684	0/0:34,0:34:99:0,99,1314	0/0:15,0:15:42.13:0,42,560	1/1:2,27:29:78.22:885,78,0	1/1:0,21:21:57.16:646,57,0	0/0:22,0:22:60.20:0,60,810	0/0:21,0:21:57.19:0,57,779	0/0:24,0:24:72.13:0,72,959	0/0:12,0:12:36.12:0,36,489	0/0:13,0:13:39.04:0,39,496	0/0:23,0:23:63.11:0,63,821	0/0:18,0:18:47.83:0,48,550	1/1:1,12:13:33.09:374,33,0	0/0:25,0:25:72.24:0,72,981	0/0:9,0:9:23.99:0,24,286	0/0:19,0:19:57.01:0,57,737	0/0:21,0:21:60.19:0,60,807	0/0:26,0:26:69.07:0,69,885	0/0:12,0:12:27.08:0,27,356
chr10	81493035	.	A	AT	3185.03	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=3.274;DP=488;FS=0.942;HRun=1;HaplotypeScore=58.7325;InbreedingCoeff=0.9814;MQ=75.55;MQ0=1;MQRankSum=-7.136;QD=37.47;ReadPosRankSum=-2.060;VQSLOD=3.1518;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.17:0,57,723	0/0:10,0:10:30.10:0,30,389	0/0:14,0:12:12.91:0,13,214	0/0:13,0:11:14.46:0,14,132	0/0:27,0:27:81.19:0,81,977	0/0:17,0:17:51.09:0,51,590	1/1:3,2:5:15.02:166,15,0	1/1:6,22:28:81.22:1151,81,0	0/0:16,0:16:48.14:0,48,608	0/0:24,0:24:72.21:0,72,890	0/0:19,0:19:57.15:0,57,697	0/0:13,0:13:33.09:0,33,404	1/1:3,18:21:60.20:888,60,0	1/1:2,19:21:60.13:842,60,0	0/0:17,0:17:51.15:0,51,626	0/0:15,0:15:45.15:0,45,583	0/0:22,0:22:66.16:0,66,795	0/0:17,0:17:51.14:0,51,641	0/0:13,0:13:39.12:0,39,494	0/0:28,0:28:81.21:0,81,985	0/0:15,0:15:45.11:0,45,553	1/1:3,7:10:21.07:311,21,0	0/0:22,0:22:63.20:0,63,804	0/0:7,0:7:18.04:0,18,216	0/0:20,0:20:57.17:0,57,713	0/0:20,0:20:60.17:0,60,731	0/0:24,0:24:66.16:0,66,823	0/0:6,0:6:18.06:0,18,233
chr10	81493053	.	A	AT	4188.57	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-1.468;DP=466;FS=7.977;HRun=8;HaplotypeScore=53.6684;InbreedingCoeff=0.9477;MQ=68.82;MQ0=1;MQRankSum=-2.020;QD=24.35;ReadPosRankSum=0.049;VQSLOD=4.0876;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.04:0,81,740	0/0:10,0:10:30.02:0,30,275	0/1:18,0:13:0.04:0,0,128	0/0:15,0:12:20.13:0,20,176	0/0:25,0:25:72.04:0,72,659	1/1:0,14:14:39.12:450,39,0	1/1:1,5:6:15.04:173,15,0	1/1:10,19:29:60.17:683,60,0	1/1:4,11:15:30.09:346,30,0	0/0:21,0:21:63.03:0,63,574	0/0:17,0:17:42.01:0,42,383	1/1:0,11:11:24.07:277,24,0	1/1:4,15:19:45.13:516,45,0	1/1:1,21:22:60.18:688,60,0	0/0:15,0:15:45.02:0,45,412	0/0:16,0:16:39.02:0,39,357	0/0:23,0:23:66.04:0,66,604	0/0:15,0:15:45.02:0,45,411	0/0:14,0:14:32.99:0,33,297	0/0:20,0:20:54.02:0,54,490	0/0:15,0:15:39.02:0,39,357	1/1:2,6:8:18.05:208,18,0	1/1:4,15:19:53.14:571,53,0	1/1:0,10:10:24.07:277,24,0	0/0:21,0:21:57.02:0,57,517	0/0:16,0:16:45.02:0,45,412	0/0:19,0:19:51.03:0,51,467	0/0:4,0:4:8.98:0,9,82
chr10	81493989	.	CTCTCT	C	1870.52	PASS	AB=1.000;AC=28;AF=0.538;AN=52;BaseQRankSum=4.890;DP=356;FS=1.214;HRun=0;HaplotypeScore=94.1850;InbreedingCoeff=0.6044;MQ=77.41;MQ0=10;MQRankSum=-5.235;QD=13.96;ReadPosRankSum=-1.771;VQSLOD=2.8819;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.23:0,66,1813	0/0:9,0:9:24.08:0,24,707	0/0:27,0:15:26.38:0,26,467	0/0:32,0:26:45.68:0,46,1113	1/1:9,2:12:0.59:3,1,0	0/0:22,0:22:57.18:0,57,1721	0/1:15,0:15:32.11:32,0,130	0/0:32,0:31:28.97:0,29,513	0/0:18,0:18:42.10:0,42,1204	./.	1/1:1,4:5:3.01:55,3,0	0/0:18,0:18:45.09:0,45,1334	0/1:13,0:12:6.96:48,0,7	0/1:10,0:10:5.07:38,0,5	1/1:2,0:10:15.05:221,15,0	1/1:3,1:4:9:179,9,0	1/1:10,2:11:27.09:501,27,0	1/1:2,4:6:11.47:195,11,0	1/1:5,1:9:14.17:191,14,0	1/1:2,0:3:2.85:39,3,0	1/1:6,0:6:3.68:67,4,0	0/1:8,0:8:3.26:3,0,19	0/0:15,0:15:39.02:0,39,983	0/0:21,0:20:56.81:0,57,1770	1/1:6,0:7:12.49:152,12,0	1/1:1,0:6:5.99:65,6,0	1/1:7,0:7:15.50:268,16,0	./.
chr10	81493991	.	CT	C	575.41	PASS	AB=0.858;AC=27;AF=0.519;AN=52;BaseQRankSum=8.916;DP=348;FS=2.088;HRun=1;HaplotypeScore=77.5756;InbreedingCoeff=0.5565;MQ=76.42;MQ0=10;MQRankSum=-4.954;QD=4.68;ReadPosRankSum=0.127;VQSLOD=0.4256;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:67.41:0,67,962	0/0:9,0:9:24.08:0,24,373	0/0:28,0:16:34.06:0,34,342	0/0:34,0:26:54.86:0,55,640	0/1:7,0:7:0.39:0,0,0	0/0:21,0:21:54.18:0,54,835	0/1:7,5:14:48.70:65,0,49	0/0:33,0:32:38.71:0,39,419	0/0:18,0:18:42.07:0,42,598	./.	1/1:5,0:5:2.37:8,2,0	0/0:19,0:19:44.76:0,45,652	1/1:12,2:13:19.33:143,19,0	0/1:4,2:10:7.04:55,0,7	1/1:10,0:10:14.71:90,15,0	1/1:4,0:4:8.89:59,9,0	1/1:12,0:11:20.85:129,21,0	0/1:6,0:6:24.30:38,0,24	0/1:7,0:7:0.42:0,0,52	1/1:2,2:4:0.15:1,0,0	1/1:5,1:5:2.73:23,3,0	1/1:2,1:7:5.82:35,6,0	0/0:14,0:14:36.09:0,36,518	0/0:21,0:20:57.08:0,57,885	1/1:3,0:4:5.52:25,6,0	1/1:5,0:6:4.54:27,5,0	1/1:6,1:7:8.27:53,8,0	./.
chr10	81493993	.	CTCT	C	2332.16	PASS	AB=0.917;AC=33;AF=0.635;AN=52;BaseQRankSum=5.506;DP=340;FS=7.427;HRun=0;HaplotypeScore=77.9799;InbreedingCoeff=0.5610;MQ=77.12;MQ0=10;MQRankSum=-4.229;QD=12.61;ReadPosRankSum=-3.640;VQSLOD=1.7468;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:74.22:0,74,1131	0/0:9,0:9:24.07:0,24,452	0/1:26,2:16:28.72:29,0,280	0/0:32,0:25:46.50:0,46,744	0/0:5,0:6:0:0,0,0	0/0:22,0:22:21.90:0,22,675	1/1:9,5:14:13.43:199,13,0	1/1:6,21:26:20.78:641,21,0	0/0:16,0:16:35.28:0,35,451	./.	1/1:5,0:5:3:27,3,0	0/0:18,0:18:38.13:0,38,516	1/1:9,2:10:20.33:251,20,0	1/1:8,2:10:14.20:163,14,0	1/1:10,0:10:15.05:185,15,0	1/1:4,0:4:9.50:118,10,0	1/1:13,0:12:26.84:317,27,0	1/1:6,0:6:6.48:106,6,0	1/1:4,0:8:2.61:128,3,0	1/1:4,0:4:2.65:20,3,0	1/1:6,0:5:2.70:37,3,0	0/1:7,1:8:4.38:22,0,4	0/1:12,0:13:35.07:35,0,321	0/0:20,0:19:53.03:0,53,750	1/1:4,0:4:6.01:65,6,0	1/1:7,0:7:3.95:30,4,0	1/1:6,0:7:13.37:140,13,0	./.
chr10	81493996	.	T	TC	1938.89	PASS	AB=1.000;AC=34;AF=0.630;AN=54;BaseQRankSum=-2.896;DP=369;FS=4.193;HRun=8;HaplotypeScore=89.7007;InbreedingCoeff=0.4957;MQ=75.30;MQ0=10;MQRankSum=-2.802;QD=8.22;ReadPosRankSum=4.906;VQSLOD=1.2500;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:47.87:0,48,413	0/0:10,0:10:20.03:0,20,165	0/0:29,0:17:32.73:0,33,273	0/0:33,0:27:45.43:0,45,332	0/1:7,0:7:0.21:0,0,0	1/1:6,16:22:19.51:453,20,0	0/0:17,0:17:8.46:0,8,32	0/1:27,0:26:12.54:56,0,13	1/1:3,12:15:28.84:301,29,0	1/1:5,0:5:3:27,3,0	0/1:4,0:4:0:0,0,0	1/1:4,15:19:29.92:346,30,0	1/1:12,0:11:3.37:10,3,0	0/1:11,0:11:2.13:2,0,11	1/1:10,0:10:1.72:4,2,0	1/1:6,0:6:0.10:0,0,0	1/1:13,0:12:3.01:7,3,0	1/1:6,0:6:2.24:4,2,0	0/1:9,0:9:1.44:79,0,1	0/0:5,0:5:0:0,0,0	0/1:8,0:7:0:0,0,0	0/0:8,0:8:4.02:0,4,11	1/1:11,4:15:30.07:332,30,0	1/1:6,15:20:40.93:456,41,0	1/1:9,0:9:1.56:3,2,0	1/1:8,0:8:0.47:1,0,0	1/1:9,0:9:1.86:4,2,0	./.
chr10	81494255	.	GA	G	2471.18	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.460;DP=579;FS=3.186;HRun=7;HaplotypeScore=54.4922;InbreedingCoeff=0.9497;MQ=80.92;MQ0=0;MQRankSum=-4.637;QD=25.22;ReadPosRankSum=2.316;VQSLOD=4.3931;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.22:0,69,867	0/0:7,0:7:21.07:0,21,264	0/0:20,0:21:59.40:0,59,715	0/0:9,0:9:18.06:0,18,226	0/0:29,0:29:78.23:0,78,959	0/0:30,0:30:84.25:0,84,1042	1/1:3,18:21:51.11:519,51,0	0/0:29,0:29:78.25:0,78,979	0/0:19,0:19:54.17:0,54,679	0/0:28,0:28:75.24:0,75,944	0/0:19,0:19:54.17:0,54,677	0/0:18,0:18:54.17:0,54,677	1/1:2,28:30:84.19:857,84,0	1/1:2,20:22:60.13:612,60,0	0/0:17,0:17:48.15:0,48,604	0/0:16,0:16:39.12:0,39,490	0/0:27,0:27:78.25:0,78,981	0/0:11,0:11:30.10:0,30,376	0/0:19,0:19:57.18:0,57,715	0/0:22,0:22:63.20:0,63,793	0/0:13,0:13:36.12:0,36,452	1/1:2,23:25:63.14:642,63,0	0/0:24,0:24:63.19:0,63,781	0/0:19,0:19:48.14:0,48,590	0/0:21,0:21:63.18:0,63,776	0/0:26,0:25:66.20:0,66,819	0/0:30,0:30:84.26:0,84,1041	0/0:1,0:1:3.01:0,3,38
chr10	81494642	.	A	AAC	9593.38	PASS	AB=0.704;AC=34;AF=0.607;AN=56;BaseQRankSum=-4.298;DP=757;FS=0.828;HRun=0;HaplotypeScore=130.6466;InbreedingCoeff=0.3281;MQ=68.38;MQ0=4;MQRankSum=-0.485;QD=16.83;ReadPosRankSum=-1.952;VQSLOD=4.6389;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:62.86:0,63,666	0/1:10,1:12:13:13,0,286	0/0:23,0:14:6.02:0,6,68	0/0:24,0:24:11.69:0,12,87	0/1:14,18:32:28.21:530,0,28	1/1:12,0:32:44.58:393,45,0	0/0:26,0:27:62.99:0,63,682	1/1:21,14:37:39.18:492,39,0	1/1:16,1:39:39:360,39,0	0/1:9,17:28:9.56:682,0,10	0/1:14,12:26:28.71:463,0,29	1/1:12,0:21:27:239,27,0	0/0:22,0:23:30:0,30,449	0/0:18,0:18:30.07:0,30,329	1/1:11,18:31:60.20:905,60,0	1/1:11,13:24:8.22:562,8,0	1/1:19,9:28:1.86:409,2,0	1/1:12,6:18:11.97:282,12,0	1/1:12,10:22:7.68:379,8,0	0/1:9,19:28:7.65:751,0,8	1/1:13,23:36:5.08:643,5,0	0/0:25,0:27:56.82:0,57,596	1/1:6,0:13:12:105,12,0	1/1:20,4:43:47.73:479,48,0	1/1:10,15:26:11.23:609,11,0	0/1:19,9:30:59.84:410,0,60	0/1:15,21:36:35.55:803,0,36	0/1:4,1:4:21.28:83,0,21
chr10	81496618	.	CTGTTTGTTTGTT	C	11889.64	PASS	AB=0.828;AC=27;AF=0.482;AN=56;BaseQRankSum=-7.597;DP=636;FS=6.968;HRun=0;HaplotypeScore=242.8962;InbreedingCoeff=0.8448;MQ=65.07;MQ0=2;MQRankSum=-10.875;QD=40.72;ReadPosRankSum=1.013;VQSLOD=3.2085;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:28:51.18:0,51,1325	0/0:11,0:11:15.05:0,15,766	0/0:26,0:18:12.04:0,12,533	0/0:32,0:21:27.09:0,27,938	1/1:8,16:24:33.07:1006,33,0	0/0:14,0:39:75.26:0,75,1975	0/0:8,0:19:21.07:0,21,541	0/0:25,0:33:26.42:0,26,437	0/0:14,0:26:41.97:0,42,1008	1/1:14,18:32:54.16:1685,54,0	1/1:7,10:17:27.05:814,27,0	0/0:8,0:23:42.14:0,42,1059	0/0:6,0:20:48.16:0,48,1244	0/0:4,0:21:45.15:0,45,1144	1/1:10,9:19:21.07:733,21,0	1/1:6,15:21:27.09:942,27,0	1/1:7,13:20:18.06:601,18,0	0/1:19,5:24:29.31:400,0,29	1/1:12,9:20:27.08:789,27,0	1/1:8,24:32:63.22:2084,63,0	1/1:12,9:21:2.09:197,2,0	0/0:11,0:29:63.20:0,63,1506	0/0:8,0:19:29.13:0,29,733	0/0:4,0:17:36.12:0,36,926	1/1:8,3:9:6.02:197,6,0	1/1:8,10:18:30.10:979,30,0	1/1:9,17:26:39.13:1361,39,0	1/1:5,1:6:0.92:101,1,0
chr10	81497198	.	AAAGG	A	1467.27	PASS	AB=1.000;AC=22;AF=0.423;AN=52;BaseQRankSum=-7.487;DP=470;FS=0.000;HRun=0;HaplotypeScore=122.7656;InbreedingCoeff=-0.0655;MQ=42.43;MQ0=28;MQRankSum=-2.788;QD=4.72;ReadPosRankSum=-9.740;VQSLOD=-0.0586;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:22:31.54:235,32,0	0/0:5,0:5:11.91:0,12,146	./.	./.	0/0:20,0:19:0.05:0,0,111	0/0:23,0:19:5.61:0,6,206	0/0:19,0:19:34.63:0,35,186	1/1:8,25:31:69.81:478,70,0	0/1:14,0:14:45.15:45,0,151	0/1:22,0:20:42.03:107,0,42	0/1:22,0:21:33.56:34,0,53	0/1:15,0:15:0.33:0,0,92	1/1:1,9:10:3.01:54,3,0	1/1:12,0:8:8.55:59,9,0	0/0:17,0:15:20.79:0,21,160	0/1:16,0:16:39.15:39,0,123	0/0:14,0:12:9.79:0,10,91	0/1:11,0:8:31.56:50,0,32	0/1:12,0:11:46.26:46,0,101	0/1:18,0:18:51.29:51,0,104	1/1:9,0:6:12:104,12,0	0/1:25,0:20:19.41:82,0,19	0/1:25,0:25:99:126,0,168	0/0:21,0:14:9.24:0,9,110	0/0:22,0:19:1.39:0,1,235	0/1:20,0:18:99:100,0,107	0/1:22,0:20:17.78:18,0,212	0/0:15,0:9:5.85:0,6,42
chr10	81497226	.	GAAGAAAGAAAGAAAGAAAGAAAGA	G	387.79	PASS	AB=1.000;AC=7;AF=0.135;AN=52;BaseQRankSum=-1.652;DP=510;FS=0.000;HRun=0;HaplotypeScore=282.6217;InbreedingCoeff=0.5626;MQ=43.03;MQ0=34;MQRankSum=-3.393;QD=5.62;ReadPosRankSum=-1.635;VQSLOD=2.0423;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:19:27.09:0,27,1273	0/0:6,0:6:12.04:0,12,314	./.	./.	0/1:29,0:28:5.95:6,0,108	0/0:19,0:14:5.93:0,6,111	1/1:18,0:17:11.96:226,12,0	0/0:33,0:28:21.04:0,21,327	0/0:19,0:19:21.94:0,22,304	0/0:21,0:19:36.59:0,37,929	0/0:23,0:22:24.07:0,24,430	0/0:10,0:10:11.41:0,11,134	1/1:11,0:11:9.03:184,9,0	1/1:11,0:7:2.44:94,2,0	0/0:22,0:20:8.88:0,9,63	0/0:22,0:22:12.04:0,12,210	0/0:14,0:11:11.25:0,11,235	0/0:10,0:6:6.02:0,6,174	0/0:18,0:16:24.03:0,24,437	0/0:23,0:23:36.12:0,36,1042	0/0:9,0:6:6.02:0,6,185	0/0:17,12:22:4.17:0,4,19	0/0:24,0:24:37.57:0,38,557	0/0:24,0:16:24.08:0,24,426	0/0:28,0:26:6.02:0,6,124	0/0:21,0:18:36.04:0,36,729	0/0:27,0:24:12.48:0,12,153	0/0:15,0:11:11.97:0,12,514
chr10	81497274	.	AAAGAAAGAAAGG	A	4620.76	PASS	AB=1.000;AC=27;AF=0.519;AN=52;BaseQRankSum=6.661;DP=540;FS=0.877;HRun=0;HaplotypeScore=148.3493;InbreedingCoeff=0.0828;MQ=50.59;MQ0=37;MQRankSum=6.493;QD=11.97;ReadPosRankSum=1.913;VQSLOD=3.7191;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:23:51.03:0,51,1218	0/0:8,0:8:13.48:0,13,115	./.	0/0:12,0:3:2.68:0,3,11	1/1:2,32:32:53.39:559,53,0	0/0:17,0:13:30.03:0,30,398	0/0:16,0:14:34.50:0,35,291	0/0:30,0:25:74.51:0,75,643	0/1:18,0:18:86.64:87,0,178	1/1:29,0:27:58.61:831,59,0	1/1:26,0:25:44.55:401,45,0	0/1:13,0:13:59.83:60,0,155	0/1:15,0:15:99:132,0,164	0/1:11,0:9:14.89:15,0,131	1/1:19,0:17:3.48:67,3,0	./.	0/1:19,0:16:30.85:354,0,31	0/1:10,0:7:45.51:110,0,46	1/1:24,0:18:53:521,53,0	0/1:30,0:30:69.09:202,0,69	1/1:7,0:6:18:198,18,0	0/0:18,0:14:11.87:0,12,84	0/1:13,0:13:53.05:53,0,156	0/1:27,0:21:99:156,0,228	1/1:24,0:22:5.72:29,6,0	1/1:28,0:25:64.48:669,64,0	0/1:24,0:21:13.98:96,0,14	0/1:15,0:11:81.98:82,0,88
chr10	81497278	.	AAAGAAAGG	A	5347.58	PASS	AB=1.000;AC=29;AF=0.537;AN=54;BaseQRankSum=7.329;DP=549;FS=0.407;HRun=0;HaplotypeScore=119.1910;InbreedingCoeff=0.2580;MQ=52.69;MQ0=33;MQRankSum=8.114;QD=13.82;ReadPosRankSum=2.625;VQSLOD=3.7755;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:22:51.03:0,51,939	0/1:8,0:8:45:115,0,45	0/0:11,0:3:5.99:0,6,57	0/0:17,0:8:12.54:0,13,89	1/1:34,0:32:53.25:432,53,0	0/0:16,0:13:25.06:0,25,273	0/0:15,0:13:35.66:0,36,291	0/0:30,0:25:74.34:0,74,549	0/1:17,0:17:48.16:48,0,211	1/1:2,28:28:81.05:1052,81,0	1/1:1,27:27:44.55:477,45,0	0/1:14,0:14:5.98:6,0,219	0/1:16,0:16:41.98:42,0,205	0/0:10,0:8:3.97:0,4,135	1/1:20,0:18:3.01:69,3,0	./.	0/1:18,0:15:19.67:323,0,20	0/1:10,0:7:9.96:110,0,10	1/1:5,19:19:56.19:628,56,0	1/1:31,0:31:62.17:423,62,0	1/1:7,0:6:18.02:276,18,0	0/0:18,0:14:11.87:0,12,84	0/1:15,0:15:30.92:31,0,204	0/1:28,0:23:80.57:81,0,308	1/1:22,0:21:5.85:66,6,0	1/1:4,25:26:69.02:889,69,0	1/1:4,19:21:8.63:107,9,0	0/1:13,0:10:22.88:173,0,23
chr10	81497282	.	AAAGG	A	4318.99	PASS	AC=26;AF=0.481;AN=54;BaseQRankSum=6.689;DP=558;FS=0.848;HRun=0;HaplotypeScore=99.3639;InbreedingCoeff=0.8905;MQ=56.34;MQ0=27;MQRankSum=7.865;QD=14.94;ReadPosRankSum=1.169;VQSLOD=4.5188;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:24:53.96:0,54,669	0/0:8,0:8:13.74:0,14,96	0/0:13,0:5:11.36:0,11,89	0/0:22,0:9:8.65:0,9,77	1/1:33,0:32:53.13:362,53,0	0/0:17,0:14:32.24:0,32,286	0/0:14,0:12:35.66:0,36,272	0/0:32,0:28:83.28:0,83,621	0/0:17,0:17:33.36:0,33,289	1/1:29,0:28:80.67:846,81,0	1/1:28,0:27:44.44:369,44,0	0/0:14,0:14:30.42:0,30,256	0/0:14,0:14:31.32:0,31,251	0/0:11,0:9:22.20:0,22,182	1/1:2,17:18:3.01:51,3,0	./.	1/1:20,0:17:20.57:385,21,0	1/1:10,0:7:11.90:102,12,0	1/1:22,0:19:53.11:469,53,0	1/1:0,33:33:71.24:581,71,0	1/1:7,0:6:18.01:201,18,0	0/0:18,0:15:14.87:0,15,111	0/0:15,0:15:30.47:0,30,265	0/0:27,0:23:34.29:0,34,378	1/1:2,22:23:5.58:66,6,0	1/1:29,0:26:68.16:645,68,0	1/1:22,0:21:11.46:92,11,0	1/1:12,0:10:0.04:151,0,0
chr10	81499266	.	ATGTGTGTGTG	A	1337.17	PASS	AB=0.891;AC=17;AF=0.315;AN=54;BaseQRankSum=1.776;DP=439;FS=8.241;HRun=0;HaplotypeScore=119.7146;InbreedingCoeff=0.1686;MQ=60.37;MQ0=19;MQRankSum=-1.654;QD=7.64;ReadPosRankSum=0.570;VQSLOD=1.8363;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:11.13:0,11,128	0/0:2,0:2:6.02:0,6,193	0/0:36,0:15:0.89:0,1,2	./.	0/1:9,4:13:5.25:21,0,5	0/0:12,0:10:3.01:0,3,68	0/0:19,0:18:20.43:0,20,540	0/0:26,0:26:13.21:0,13,117	0/0:9,0:10:3.01:0,3,90	0/1:3,0:2:0.99:67,0,1	0/0:5,1:6:2.84:0,3,14	0/0:6,0:8:3.01:0,3,91	0/0:5,0:5:9.03:0,9,251	0/0:13,0:13:12.04:0,12,474	1/1:15,0:15:0.90:68,1,0	0/1:9,1:12:5.84:282,0,6	0/1:14,1:14:88.01:136,0,88	1/1:16,0:15:0.36:106,0,0	0/1:14,0:14:15.93:55,0,16	0/0:5,7:12:2.42:0,2,7	0/1:43,0:43:23.08:108,0,23	0/0:14,0:14:18.06:0,18,617	0/0:4,0:5:3.01:0,3,91	0/0:14,0:17:9.03:0,9,298	1/1:9,2:10:6:112,6,0	1/1:9,6:15:17.56:266,18,0	1/1:4,0:6:2.97:20,3,0	0/1:7,4:11:46.55:244,0,47
chr10	81499409	.	C	CATATAT	1404.73	PASS	AB=1.000;AC=26;AF=0.765;AN=34;BaseQRankSum=-2.399;DP=220;FS=1.316;HRun=0;HaplotypeScore=60.7415;InbreedingCoeff=0.3778;MQ=84.25;MQ0=5;MQRankSum=-1.018;QD=11.33;ReadPosRankSum=-0.239;VQSLOD=2.0946;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:12:0.94:0,1,3	0/0:7,0:7:15.04:0,15,255	0/1:28,0:15:10.60:11,0,22	0/0:60,0:20:17.94:0,18,143	1/1:5,0:5:3.01:48,3,0	./.	0/1:3,0:3:0:0,0,0	1/1:5,0:39:25.40:240,25,0	./.	1/1:2,2:4:6.02:150,6,0	1/1:1,2:3:3.01:101,3,0	./.	./.	./.	1/1:1,2:3:3.01:101,3,0	./.	1/1:2,9:12:3.01:101,3,0	1/1:4,0:4:8.98:104,9,0	1/1:2,2:4:3.01:101,3,0	./.	./.	./.	./.	1/1:2,0:2:2.99:23,3,0	1/1:2,5:8:8.77:198,9,0	1/1:4,0:4:5.92:39,6,0	./.	1/1:1,4:5:9.03:303,9,0
chr10	81501411	.	A	AT	1309.52	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-7.156;DP=389;FS=9.765;HRun=7;HaplotypeScore=44.6325;InbreedingCoeff=0.7817;MQ=79.65;MQ0=1;MQRankSum=-0.476;QD=19.55;ReadPosRankSum=0.554;VQSLOD=2.2387;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:45.07:0,45,435	0/0:9,0:9:27.04:0,27,261	0/0:19,0:12:3.58:0,4,67	0/1:19,0:15:32.79:33,0,52	0/0:15,0:15:36.05:0,36,347	1/1:1,12:13:33.10:399,33,0	0/0:1,0:1:3:0,3,29	0/0:22,0:22:51.07:0,51,488	1/1:0,10:10:27.08:326,27,0	0/0:14,0:14:24.03:0,24,231	0/0:25,0:25:63.10:0,63,608	1/1:0,8:8:21.06:254,21,0	0/0:6,0:6:12.02:0,12,116	0/0:10,0:10:27.03:0,27,255	0/0:10,0:10:30.02:0,30,278	0/0:11,0:11:33.05:0,33,319	0/0:22,0:22:57.08:0,57,550	0/0:13,0:13:30.50:0,30,284	0/0:18,0:18:54.08:0,54,517	0/0:17,0:17:39.05:0,39,377	0/0:3,0:3:9:0,9,81	0/0:6,0:6:12.01:0,12,116	1/1:1,12:13:30.09:362,30,0	1/1:0,4:4:9.03:109,9,0	0/0:20,0:20:57.09:0,57,550	0/0:20,0:20:57.07:0,57,544	0/0:27,0:27:72.09:0,72,689	0/0:11,0:11:15.02:0,15,145
chr10	81501913	.	GA	G	2012.06	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.386;DP=580;FS=0.975;HRun=7;HaplotypeScore=53.4313;InbreedingCoeff=0.9934;MQ=76.24;MQ0=0;MQRankSum=-1.745;QD=23.67;ReadPosRankSum=1.659;VQSLOD=3.7105;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.23:0,72,906	0/0:9,0:9:27.09:0,27,340	0/0:13,0:13:30.10:0,30,374	0/0:11,0:11:24.02:0,24,254	0/0:26,0:26:75.21:0,75,907	0/0:27,0:27:78.24:0,78,970	1/1:2,14:16:39.09:398,39,0	0/0:35,0:35:69.21:0,69,857	0/0:19,0:19:54.17:0,54,676	0/0:24,0:24:63.20:0,63,783	0/0:22,0:22:63.20:0,63,788	0/0:26,0:26:69.20:0,69,842	1/1:2,16:18:42.10:428,42,0	1/1:3,18:21:51.11:520,51,0	0/0:23,0:23:69.22:0,69,868	0/0:21,0:21:57.18:0,57,717	0/0:15,0:15:45.10:0,45,548	0/0:9,0:9:21.02:0,21,234	0/0:16,0:16:42.13:0,42,525	0/0:35,0:35:99:0,102,1283	0/0:7,0:7:15.05:0,15,189	1/1:1,29:30:81.18:826,81,0	0/0:29,0:29:84.22:0,84,1027	0/0:22,0:22:66.20:0,66,818	0/0:18,0:18:51.15:0,51,628	0/0:21,0:21:54.17:0,54,676	0/0:29,0:29:84.23:0,84,1028	0/0:14,0:14:39.12:0,39,491
chr10	81504098	.	GT	G	5588.69	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=4.215;DP=502;FS=1.741;HRun=12;HaplotypeScore=65.4919;InbreedingCoeff=0.8718;MQ=73.21;MQ0=1;MQRankSum=-0.448;QD=13.70;ReadPosRankSum=4.027;VQSLOD=5.3535;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:20:29.18:0,29,159	0/0:8,0:9:20.88:0,21,197	0/0:12,0:11:4.71:0,5,71	0/1:9,0:9:1.49:1,0,21	1/1:5,26:31:43.24:478,43,0	1/1:2,0:17:26:76,26,0	0/0:13,0:13:24.05:0,24,244	1/1:5,20:25:59.73:461,60,0	1/1:1,0:25:46.37:135,46,0	1/1:4,22:26:56.74:441,57,0	1/1:5,26:31:37.16:439,37,0	1/1:2,0:13:16.29:48,16,0	0/0:11,1:12:3.82:0,4,220	0/0:15,0:15:32.98:0,33,308	1/1:2,14:16:38.84:302,39,0	1/1:4,16:21:43.86:331,44,0	1/1:5,13:18:44.82:348,45,0	1/1:2,5:8:13.98:99,14,0	1/1:2,13:15:38.83:302,39,0	1/1:1,23:24:62.71:484,63,0	1/1:6,13:19:10.42:254,10,0	0/0:13,0:13:30.02:0,30,283	1/1:3,0:21:30.54:90,31,0	1/1:1,0:10:14.26:42,14,0	1/1:3,17:21:46.82:354,47,0	1/1:6,11:18:10.39:254,10,0	1/1:4,20:24:59.75:464,60,0	1/1:7,7:14:23.88:186,24,0
chr10	81504264	.	T	TA	8051.27	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-12.624;DP=502;FS=0.744;HRun=8;HaplotypeScore=42.5130;InbreedingCoeff=0.9608;MQ=71.54;MQ0=0;MQRankSum=-1.482;QD=27.96;ReadPosRankSum=-0.055;VQSLOD=4.8796;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.03:0,54,494	0/0:7,0:7:18:0,18,165	0/0:9,0:9:9.95:0,10,106	0/0:4,0:4:2.02:0,2,26	1/1:3,32:35:93.11:1014,93,0	0/0:31,0:31:81.03:0,81,741	0/0:18,0:18:44.98:0,45,402	0/0:25,0:25:60.01:0,60,545	0/0:18,0:18:47.99:0,48,430	1/1:2,16:18:48.14:554,48,0	1/1:1,23:24:66.15:747,66,0	0/0:14,0:14:42:0,42,375	0/0:10,0:10:27.01:0,27,247	0/0:19,0:19:24.36:0,24,388	1/1:0,20:20:54.16:623,54,0	1/1:2,7:9:15.04:173,15,0	1/1:5,19:24:51.14:579,51,0	1/1:3,11:14:30.09:345,30,0	1/1:1,6:7:18.05:208,18,0	1/1:2,22:25:42.95:723,43,0	1/1:1,15:17:41.96:465,42,0	0/0:12,0:12:33.02:0,33,302	0/0:17,0:17:45.01:0,45,412	0/0:11,0:11:27.01:0,27,247	1/1:2,21:23:57.17:658,57,0	1/1:1,23:24:63.17:716,63,0	1/1:1,28:29:75.22:866,75,0	1/1:6,12:19:35.90:381,36,0
chr10	81505568	.	A	AAGAG	16415.29	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=-2.601;DP=735;FS=1.585;HRun=0;HaplotypeScore=180.5899;InbreedingCoeff=0.5531;MQ=52.87;MQ0=12;MQRankSum=-3.860;QD=28.95;ReadPosRankSum=4.050;VQSLOD=4.7668;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:39.17:0,39,389	0/0:12,0:12:27.09:0,27,430	0/0:49,0:22:32.26:0,32,326	0/0:73,0:22:13.96:0,14,113	1/1:18,9:28:56.78:975,57,0	1/1:29,0:28:57.41:850,57,0	1/1:12,0:12:16.96:120,17,0	0/1:25,0:25:11.41:13,0,11	0/1:26,0:25:22.22:517,0,22	1/1:22,8:30:80.75:1290,81,0	1/1:14,6:20:36.07:625,36,0	1/1:24,0:24:15.77:552,16,0	1/1:8,0:36:75.13:1052,75,0	1/1:6,0:24:40.01:601,40,0	1/1:13,5:18:44.73:744,45,0	1/1:17,7:24:35.04:748,35,0	1/1:16,8:22:50.93:854,51,0	1/1:10,2:12:21.44:329,21,0	1/1:10,2:11:17.99:275,18,0	1/1:28,15:42:84.17:1680,84,0	1/1:8,6:14:30.09:567,30,0	1/1:8,0:25:38.83:439,39,0	0/1:22,0:22:73.99:338,0,74	0/1:21,0:20:59.72:146,0,60	1/1:15,11:26:56.87:1070,57,0	1/1:12,8:21:51.04:923,51,0	1/1:22,13:35:71.75:1384,72,0	1/1:11,2:14:3.75:325,4,0
chr10	81505570	.	G	GAA	6445.43	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=4.548;DP=735;FS=3.433;HRun=3;HaplotypeScore=190.8761;InbreedingCoeff=0.3715;MQ=52.43;MQ0=13;MQRankSum=-6.984;QD=15.17;ReadPosRankSum=9.871;VQSLOD=1.1976;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:37:21:21,0,374	0/0:12,0:12:33.08:0,33,462	0/0:52,0:21:34.49:0,34,517	0/0:75,0:21:43.12:0,43,434	0/1:26,0:26:23.03:23,0,239	1/1:6,22:27:70.46:1218,70,0	0/1:13,0:13:15.76:168,0,16	1/1:1,22:23:66.13:1011,66,0	1/1:6,20:25:34.84:748,35,0	0/1:29,0:29:29.39:29,0,334	0/0:20,0:20:9.20:0,9,246	1/1:4,20:24:31.04:683,31,0	1/1:35,0:35:26.87:663,27,0	1/1:21,0:22:43.76:404,44,0	0/1:19,0:18:15.31:15,0,189	0/0:24,0:24:17.39:0,17,308	0/0:24,0:22:13.18:0,13,252	0/0:12,0:12:5.78:0,6,63	0/0:11,0:10:16.37:0,16,202	0/0:44,0:43:10.04:0,10,410	0/1:14,0:14:3.30:3,0,92	1/1:24,0:24:19.66:333,20,0	1/1:5,17:22:35.19:561,35,0	1/1:17,3:19:30.61:518,31,0	0/1:27,0:26:19.31:19,0,210	0/0:21,0:21:5.48:0,5,267	0/1:36,0:36:27.74:28,0,302	0/0:14,0:14:0.81:0,1,199
chr10	81505585	.	AG	A	230.38	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.035;DP=762;FS=1.200;HRun=1;HaplotypeScore=217.8062;InbreedingCoeff=0.7607;MQ=51.20;MQ0=18;MQRankSum=5.033;QD=6.98;ReadPosRankSum=0.852;VQSLOD=0.6802;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,13:33:24.91:324,25,0	0/0:10,0:10:30.09:0,30,456	0/0:69,0:21:45.36:0,45,586	0/0:94,0:19:33.39:0,33,409	0/0:25,0:25:72.10:0,72,790	0/0:28,0:27:47.51:0,48,334	0/0:15,0:15:3.25:0,3,128	0/0:26,0:26:63.13:0,63,699	0/0:24,0:23:37.05:0,37,249	0/0:37,0:37:99:0,109,1263	0/0:18,0:18:48.09:0,48,543	0/0:19,0:19:28.84:0,29,183	0/0:35,0:35:71.51:0,72,576	0/0:24,0:24:17.22:0,17,258	0/0:21,0:20:58.35:0,58,663	0/0:22,0:22:63.09:0,63,701	0/0:23,0:21:57.06:0,57,615	0/0:13,0:13:34.05:0,34,353	0/0:12,0:11:33.07:0,33,402	0/0:39,0:38:99:0,105,1144	0/0:18,0:18:44.50:0,44,510	0/0:20,0:20:29.23:0,29,260	0/0:23,0:23:14.20:0,14,138	0/0:22,0:21:5.92:0,6,147	0/0:27,0:26:77.73:0,78,746	0/0:22,0:22:66.11:0,66,753	0/0:29,0:29:87.09:0,87,922	0/0:13,0:13:29.50:0,30,351
chr10	81505587	.	AAAG	A	495.22	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.160;DP=769;FS=0.836;HRun=0;HaplotypeScore=241.5641;InbreedingCoeff=0.9984;MQ=51.19;MQ0=16;MQRankSum=1.284;QD=15.01;ReadPosRankSum=3.192;VQSLOD=2.9211;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,13:33:47.21:590,47,0	0/0:10,0:10:30.10:0,30,681	0/0:71,0:21:52.83:0,53,779	0/0:93,0:19:35.61:0,36,517	0/0:25,0:25:68.69:0,69,1196	0/0:28,0:27:80.92:0,81,1012	0/0:16,0:16:43.36:0,43,402	0/0:26,0:26:77.43:0,77,1259	0/0:23,0:23:51.08:0,51,708	0/0:36,0:37:99:0,104,1921	0/0:19,0:19:56.85:0,57,1005	0/0:19,0:19:47.58:0,48,579	0/0:36,0:36:89.55:0,90,1054	0/0:22,0:23:59.78:0,60,655	0/0:21,0:20:57.87:0,58,1081	0/0:23,0:23:65.78:0,66,1177	0/0:24,0:22:59.84:0,60,1008	0/0:14,0:14:37.69:0,38,563	0/0:12,0:12:35.68:0,36,629	0/0:39,0:38:99:0,108,1853	0/0:19,0:19:44.84:0,45,804	0/0:20,0:20:47.14:0,47,519	0/0:23,0:23:50.81:0,51,585	0/0:21,0:20:47.84:0,48,530	0/0:26,0:25:68.36:0,68,1145	0/0:22,0:22:66.01:0,66,1287	0/0:31,0:31:92.90:0,93,1596	0/0:11,0:11:29.37:0,29,418
chr10	81505588	.	A	AAG	6672.56	PASS	AB=0.991;AC=21;AF=0.375;AN=56;BaseQRankSum=-6.027;DP=774;FS=1.992;HRun=0;HaplotypeScore=209.2437;InbreedingCoeff=0.7712;MQ=50.95;MQ0=16;MQRankSum=-4.318;QD=23.33;ReadPosRankSum=2.413;VQSLOD=4.9733;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:58.48:0,58,266	0/0:10,0:10:24.06:0,24,290	0/0:74,0:22:20.70:0,21,265	0/0:94,0:19:6.43:0,6,214	0/0:25,0:25:25.76:0,26,318	1/1:11,17:27:81.18:1186,81,0	1/1:17,0:17:41.57:501,42,0	0/0:26,0:26:50.38:0,50,520	1/1:13,10:23:48.42:659,48,0	0/1:37,0:38:8.11:8,0,635	0/0:19,0:19:19.74:0,20,348	1/1:8,11:19:48.08:703,48,0	1/1:22,14:36:88.39:1161,88,0	1/1:12,10:23:54.13:810,54,0	0/0:21,0:20:37.84:0,38,358	0/0:23,0:23:44.76:0,45,433	0/0:24,0:22:18.16:0,18,293	0/1:14,0:14:12.04:12,0,138	0/0:12,0:12:22.31:0,22,227	0/0:39,0:38:34.74:0,35,489	0/0:20,0:20:6.33:0,6,260	1/1:13,6:20:42.96:489,43,0	1/1:15,7:22:50.64:658,51,0	1/1:19,2:20:39.02:481,39,0	0/1:24,0:23:5.21:5,0,263	0/0:23,0:23:52.01:0,52,481	0/0:31,0:31:45.79:0,46,425	0/0:10,0:10:22.65:0,23,203
chr10	81505613	.	AGAG	A	11303.62	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-0.342;DP=722;FS=12.494;HRun=0;HaplotypeScore=174.4530;InbreedingCoeff=0.9898;MQ=55.94;MQ0=12;MQRankSum=-0.473;QD=38.45;ReadPosRankSum=4.806;VQSLOD=5.3518;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.24:0,84,1818	0/0:6,0:6:18.05:0,18,365	0/0:72,0:27:74.73:0,75,1142	0/0:88,0:27:49.58:0,50,909	1/1:1,17:18:51.13:782,51,0	0/0:32,0:31:90.24:0,90,1835	0/0:21,0:21:60.03:0,60,1263	0/0:24,0:24:72.16:0,72,1256	0/0:20,0:20:60.14:0,60,1285	1/1:4,28:32:90.20:1401,90,0	1/1:3,14:17:50.88:713,51,0	0/0:16,0:16:48.10:0,48,994	0/0:33,0:33:83.53:0,84,1470	0/0:18,0:18:48.09:0,48,1035	1/1:4,16:20:52.63:773,53,0	1/1:2,19:21:45.15:731,45,0	1/1:3,19:20:51.15:789,51,0	1/1:5,8:13:23.95:369,24,0	1/1:1,7:8:24.03:346,24,0	1/1:8,24:32:84.02:1243,84,0	1/1:3,19:22:36.07:569,36,0	0/0:21,0:21:45.14:0,45,945	0/0:23,0:23:63.06:0,63,1254	0/0:21,0:20:51.18:0,51,1123	1/1:6,16:22:57.12:856,57,0	1/1:8,20:27:81.11:1159,81,0	1/1:3,24:27:72.24:1173,72,0	1/1:4,8:12:8.71:400,9,0
chr10	81506578	.	T	TGAGAGA	1871.92	PASS	AB=0.835;AC=31;AF=0.738;AN=42;BaseQRankSum=0.422;DP=294;FS=2.521;HRun=0;HaplotypeScore=92.7759;InbreedingCoeff=0.2623;MQ=30.80;MQ0=44;MQRankSum=-3.841;QD=8.75;ReadPosRankSum=-0.047;VQSLOD=1.4831;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:8:5.98:80,6,0	0/0:8,0:8:15.05:0,15,251	./.	./.	0/0:8,3:11:3.47:0,3,27	1/1:16,0:13:15.05:271,15,0	./.	1/1:20,0:12:3.39:9,3,0	1/1:7,0:5:6.02:130,6,0	0/1:4,1:4:3.68:91,0,4	0/1:12,3:15:0:0,0,0	1/1:9,0:7:9.02:138,9,0	1/1:15,0:13:15.52:355,16,0	1/1:11,0:10:3.90:74,4,0	1/1:14,0:10:8.93:73,9,0	./.	1/1:8,1:6:9.03:174,9,0	1/1:6,0:6:3.01:79,3,0	1/1:14,1:14:3.90:99,4,0	./.	./.	0/0:14,0:12:2.52:0,3,14	1/1:16,0:11:3.01:39,3,0	0/1:11,0:6:0:0,0,0	1/1:4,3:10:2.04:6,2,0	0/1:8,1:7:8.88:184,0,9	0/1:5,4:7:18.15:192,0,18	./.
chr10	81508697	.	C	CA	3147.49	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-13.417;DP=574;FS=0.000;HRun=8;HaplotypeScore=51.1952;InbreedingCoeff=0.9786;MQ=75.62;MQ0=0;MQRankSum=-1.462;QD=27.61;ReadPosRankSum=3.168;VQSLOD=3.9735;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.02:0,78,708	0/0:3,0:3:9:0,9,82	0/0:11,0:11:11.99:0,12,109	0/0:12,0:12:24:0,24,217	0/0:31,0:31:90.01:0,90,811	1/1:2,30:32:90.27:1039,90,0	0/0:17,0:17:48.03:0,48,439	0/0:30,0:30:66:0,66,596	1/1:4,20:24:54.16:623,54,0	0/0:29,0:29:87.04:0,87,794	0/0:27,0:27:78.03:0,78,710	1/1:1,21:22:57.17:658,57,0	0/0:19,0:19:51.02:0,51,467	0/0:22,0:22:48.02:0,48,439	0/0:19,0:19:45:0,45,407	0/0:18,0:18:45.02:0,45,412	0/0:18,0:18:42:0,42,378	0/0:18,0:18:45.02:0,45,412	0/0:21,0:21:51:0,51,463	0/0:25,0:25:75.04:0,75,686	0/0:21,0:21:60.03:0,60,549	0/0:17,0:17:45.02:0,45,412	1/1:3,18:21:51.15:588,51,0	1/1:2,13:15:36.11:415,36,0	0/0:10,0:10:27.01:0,27,247	0/0:25,0:25:72.03:0,72,656	0/0:23,0:23:60.03:0,60,549	0/0:16,0:16:33:0,33,302
chr10	81509202	.	T	TATGGGAGGGTTTA	14237.77	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=-9.209;DP=364;FS=4.265;HRun=0;HaplotypeScore=123.2319;InbreedingCoeff=0.9359;MQ=75.52;MQ0=0;MQRankSum=-10.898;QD=122.74;ReadPosRankSum=-1.750;VQSLOD=4.6356;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,2:6:15.05:741,15,0	0/0:7,0:7:21.07:0,21,728	0/0:16,0:16:36:0,36,825	0/0:6,0:6:11.98:0,12,261	0/0:19,0:19:57.20:0,57,2156	1/1:1,9:18:27.09:1801,27,0	1/1:0,3:5:9.03:600,9,0	1/1:5,5:41:99:5462,113,0	1/1:0,3:5:9.03:600,9,0	0/0:16,0:16:48.16:0,48,1749	0/0:18,0:18:54.17:0,54,1963	1/1:0,6:10:18.06:1201,18,0	1/1:1,6:10:21.07:1231,21,0	1/1:0,9:14:27.09:1800,27,0	0/0:8,0:8:24.08:0,24,982	0/0:10,0:10:30.10:0,30,1228	0/0:23,0:23:66.16:0,66,2305	0/0:12,0:12:32.58:0,33,1246	0/0:7,0:7:21.07:0,21,845	0/0:20,0:20:60.18:0,60,2114	0/0:9,0:9:27.09:0,27,974	./.	1/1:0,3:4:9.50:601,10,0	1/1:0,1:3:3.01:200,3,0	0/0:19,0:19:51.13:0,51,1771	0/0:15,0:15:42.14:0,42,1478	0/0:28,0:28:78.24:0,78,2725	0/0:15,0:15:45.15:0,45,1774
chr10	81509412	.	CA	C	7478.81	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=4.217;DP=463;FS=5.684;HRun=6;HaplotypeScore=50.5088;InbreedingCoeff=0.9264;MQ=73.13;MQ0=0;MQRankSum=-3.343;QD=29.10;ReadPosRankSum=2.379;VQSLOD=5.5029;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:33.09:0,33,419	0/0:5,0:5:15.05:0,15,197	0/1:7,0:7:11.06:11,0,187	0/0:14,0:14:32.63:0,33,417	1/1:0,20:20:54.13:580,54,0	0/0:18,0:18:54.18:0,54,707	0/0:14,0:14:36.10:0,36,456	0/0:7,0:38:88.69:0,89,457	0/0:22,0:22:60.20:0,60,789	1/1:0,17:17:48.08:498,48,0	1/1:0,18:18:54.14:580,54,0	0/0:14,0:14:36.12:0,36,474	0/0:15,0:15:39.13:0,39,513	0/0:18,0:18:45.14:0,45,577	1/1:2,21:23:60.15:645,60,0	1/1:0,7:7:21.05:226,21,0	1/1:0,10:10:27.07:290,27,0	1/1:0,4:4:12.03:129,12,0	1/1:2,22:24:69.17:740,69,0	1/1:2,19:21:51.13:548,51,0	1/1:0,20:20:60.15:645,60,0	0/0:10,0:10:30.08:0,30,380	0/0:13,0:13:33.11:0,33,434	0/0:14,0:14:39.13:0,39,513	1/1:0,24:24:69.17:742,69,0	1/1:1,21:22:63.10:651,63,0	1/1:1,24:25:66.16:709,66,0	1/1:0,15:15:45.11:484,45,0
chr10	81509951	.	CT	C	3134.50	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.492;DP=590;FS=1.880;HRun=4;HaplotypeScore=82.1933;InbreedingCoeff=0.9994;MQ=83.65;MQ0=0;MQRankSum=-0.323;QD=30.43;ReadPosRankSum=2.153;VQSLOD=4.0150;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:48.16:0,48,670	0/0:9,0:9:27.09:0,27,378	0/0:17,0:17:45.09:0,45,572	0/0:17,0:17:39.07:0,39,488	0/0:33,0:33:99:0,99,1386	1/1:1,17:18:48.15:576,48,0	0/0:14,0:14:42.14:0,42,588	0/0:27,0:27:78.25:0,78,1078	1/1:0,18:18:48.15:576,48,0	0/0:21,0:21:60.20:0,60,840	0/0:29,0:29:84.28:0,84,1176	1/1:0,18:18:51.16:612,51,0	0/0:20,0:20:57.18:0,57,782	0/0:24,0:24:66.22:0,66,924	0/0:20,0:20:60.20:0,60,840	0/0:22,0:22:63.20:0,63,867	0/0:9,0:9:27.06:0,27,358	0/0:12,0:12:33.07:0,33,440	0/0:16,0:16:45.15:0,45,630	0/0:37,0:37:99:0,111,1541	0/0:17,0:17:48.16:0,48,672	0/0:25,0:25:75.23:0,75,1018	1/1:1,28:29:77.91:935,78,0	1/1:1,19:20:51.16:612,51,0	0/0:24,0:24:69.21:0,69,935	0/0:25,0:25:75.24:0,75,1035	0/0:32,0:32:96.31:0,96,1328	0/0:18,0:18:48.16:0,48,672
chr10	81510722	.	CT	C	153.66	PASS	AB=0.600;AC=19;AF=0.864;AN=22;BaseQRankSum=1.557;DP=52;FS=9.650;HRun=1;HaplotypeScore=19.7479;InbreedingCoeff=0.0558;MQ=22.62;MQ0=0;MQRankSum=-0.623;QD=6.98;ReadPosRankSum=2.180;VQSLOD=0.0892;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,2:2:2.99:24,3,0	./.	./.	./.	1/1:0,3:2:2.99:24,3,0	./.	0/0:2,0:2:5.95:0,6,42	1/1:1,1:1:2.99:24,3,0	0/1:1,2:2:13.03:13,0,16	./.	./.	1/1:0,1:1:2.99:24,3,0	./.	./.	1/1:0,1:1:2.99:23,3,0	./.	./.	1/1:0,2:2:5.90:38,6,0	./.	./.	1/1:0,2:2:3:25,3,0	./.	./.	./.	1/1:1,1:2:2.99:23,3,0	1/1:0,3:3:2.99:24,3,0	./.
chr10	81510755	.	AG	A	739.97	PASS	AC=18;AF=1.000;AN=18;DP=54;FS=0.000;HRun=1;HaplotypeScore=63.6499;MQ=26.76;MQ0=0;QD=15.10;VQSLOD=3.2822;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,3:3:8.98:73,9,0	./.	./.	1/1:0,8:8:11.98:98,12,0	./.	./.	./.	./.	1/1:0,5:4:11.92:87,12,0	1/1:0,3:3:5.99:48,6,0	./.	./.	./.	./.	./.	./.	1/1:0,1:1:2.99:23,3,0	./.	1/1:2,10:8:17.96:143,18,0	./.	./.	1/1:1,9:9:23.97:199,24,0	./.	1/1:0,5:4:11.97:95,12,0	./.	./.	1/1:0,2:2:5.97:45,6,0
chr10	81513078	.	G	GTA	988.86	PASS	AC=10;AF=0.208;AN=48;BaseQRankSum=8.998;DP=446;FS=9.215;HRun=0;HaplotypeScore=73.2369;InbreedingCoeff=0.8936;MQ=75.48;MQ0=2;MQRankSum=-6.619;QD=21.50;ReadPosRankSum=1.298;VQSLOD=3.5691;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.33:0,96,1552	0/0:7,0:7:18.06:0,18,282	0/0:25,0:25:12.66:0,13,919	0/0:27,0:27:23.73:0,24,774	0/0:15,0:15:39.13:0,39,629	1/1:2,11:9:19.29:305,19,0	./.	0/0:34,0:34:99:0,102,1659	1/1:0,16:11:30.10:440,30,0	0/0:21,0:20:60.16:0,60,950	0/0:6,0:5:15.05:0,15,244	1/1:2,10:8:21.07:307,21,0	./.	./.	0/0:30,0:30:78.27:0,78,1266	0/0:24,0:24:72.25:0,72,1175	0/0:34,0:33:93.30:0,93,1484	0/0:15,0:15:42.12:0,42,658	0/0:21,0:20:60.18:0,60,953	0/0:7,0:6:18.06:0,18,293	0/0:33,0:33:99:0,99,1577	./.	1/1:0,1:1:3.01:44,3,0	1/1:1,3:2:3.01:44,3,0	0/0:10,0:10:27.09:0,27,434	0/0:15,0:15:45.12:0,45,701	0/0:28,0:28:84.29:0,84,1339	0/0:12,0:12:36.12:0,36,575
chr10	81513079	.	G	GTTAC	1799.76	PASS	AB=0.879;AC=11;AF=0.229;AN=48;BaseQRankSum=8.650;DP=456;FS=7.363;HRun=0;HaplotypeScore=92.5364;InbreedingCoeff=0.8099;MQ=74.81;MQ0=3;MQRankSum=-7.539;QD=21.68;ReadPosRankSum=0.536;VQSLOD=2.8357;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1897	0/0:7,0:7:18.06:0,18,354	0/0:24,0:25:58:0,58,1006	0/1:25,0:27:12.66:13,0,981	0/0:15,0:15:39.10:0,39,739	1/1:2,11:9:21.07:468,21,0	./.	0/0:35,0:35:99:0,102,2003	1/1:1,16:11:30.10:667,30,0	0/0:21,0:20:60.21:0,60,1170	0/0:6,0:5:15.05:0,15,298	1/1:7,10:12:27.09:607,27,0	./.	./.	0/0:30,0:30:78.21:0,78,1457	0/0:24,0:24:72.24:0,72,1403	0/0:33,0:33:93.29:0,93,1753	0/0:15,0:15:42.14:0,42,800	0/0:21,0:19:57.20:0,57,1114	0/0:7,0:6:18.06:0,18,359	0/0:33,0:33:90.31:0,90,1790	./.	1/1:0,1:1:3.01:66,3,0	1/1:3,3:4:6.02:138,6,0	0/0:10,0:10:27.06:0,27,499	0/0:16,0:16:45.13:0,45,827	0/0:28,0:28:81.28:0,81,1608	0/0:12,0:12:36.04:0,36,542
chr10	81521153	.	T	TG	303.11	PASS	AB=0.805;AC=8;AF=0.160;AN=50;BaseQRankSum=0.307;DP=578;FS=6.691;HRun=1;HaplotypeScore=36.8345;InbreedingCoeff=0.4465;MQ=23.88;MQ0=171;MQRankSum=-3.184;QD=5.05;ReadPosRankSum=1.541;VQSLOD=0.5471;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:28:30.10:0,30,389	0/0:6,0:3:9.03:0,9,117	./.	./.	0/0:10,0:5:6.02:0,6,78	0/1:3,4:6:26.84:122,0,27	0/0:22,0:3:2.96:0,3,19	0/0:23,1:5:15.05:0,15,192	1/1:3,4:5:12.04:179,12,0	0/0:21,0:12:30.06:0,30,365	0/0:12,0:5:5.99:0,6,60	1/1:4,3:5:6.02:90,6,0	0/0:9,0:5:6.02:0,6,78	0/0:21,0:13:15.05:0,15,194	0/0:18,0:10:21.07:0,21,272	0/0:9,0:3:6.02:0,6,78	0/0:32,0:18:24.08:0,24,311	0/1:36,1:18:23.75:24,0,212	0/0:18,0:9:21.07:0,21,270	0/0:12,0:5:14.88:0,15,118	0/0:86,0:31:48.05:0,48,584	0/0:11,0:8:11.97:0,12,135	1/1:1,1:1:2.94:18,3,0	./.	0/0:29,0:16:24.08:0,24,311	0/0:16,0:9:24.07:0,24,298	0/0:14,0:11:27.09:0,27,348	0/0:14,0:12:18.06:0,18,233
chr10	81521284	.	C	CTTTT	1395.30	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=0.155;DP=386;FS=0.760;HRun=11;HaplotypeScore=65.7625;InbreedingCoeff=0.7546;MQ=60.78;MQ0=7;MQRankSum=-5.767;QD=15.17;ReadPosRankSum=-3.028;VQSLOD=-0.3726;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:24:44.19:0,44,591	0/0:7,0:7:12.49:0,12,164	0/0:22,0:11:0.15:0,0,87	0/1:14,0:5:7.30:7,0,37	0/0:20,0:20:38.96:0,39,516	1/1:3,10:15:27.05:544,27,0	1/1:1,3:6:9.03:166,9,0	0/0:23,0:21:40.16:0,40,519	1/1:8,0:12:6.02:77,6,0	0/0:10,0:13:25.23:0,25,296	0/0:20,0:20:45.05:0,45,613	1/1:2,3:7:6.02:139,6,0	1/1:4,1:8:9.03:167,9,0	1/1:7,0:7:9.03:147,9,0	0/0:10,0:10:20.98:0,21,286	0/0:3,0:4:12.02:0,12,146	0/0:24,0:26:38.95:0,39,526	0/0:16,0:15:32.76:0,33,449	0/0:20,0:20:51.02:0,51,610	0/0:17,0:19:44.99:0,45,574	0/0:5,0:6:11.98:0,12,146	1/1:3,0:6:3.01:57,3,0	1/1:1,7:8:6.02:139,6,0	1/1:4,4:8:6.02:139,6,0	0/0:14,0:14:26.90:0,27,345	0/0:16,0:15:32.92:0,33,421	0/0:11,0:13:22.21:0,22,285	0/0:12,0:15:20.97:0,21,268
chr10	81522324	.	A	ATGTG	12012.15	PASS	AB=0.935;AC=37;AF=0.685;AN=54;BaseQRankSum=-2.895;DP=764;FS=1.401;HRun=0;HaplotypeScore=169.1269;InbreedingCoeff=0.7745;MQ=58.63;MQ0=4;MQRankSum=1.015;QD=20.78;ReadPosRankSum=-0.676;VQSLOD=4.7201;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:13.18:0,13,252	0/0:8,0:9:21.05:0,21,267	./.	0/1:20,0:14:0:0,0,0	1/1:29,7:39:61.88:882,62,0	0/0:22,0:24:0.18:0,0,430	1/1:31,1:32:10.21:75,10,0	0/1:17,0:26:25.08:25,0,44	0/0:31,0:34:74.79:0,75,1019	1/1:32,4:38:86.59:1203,87,0	1/1:9,18:27:21.07:503,21,0	0/0:23,0:23:42.08:0,42,607	1/1:33,0:35:31.81:318,32,0	1/1:25,0:24:23.68:181,24,0	1/1:27,10:38:60.38:1142,60,0	1/1:19,9:30:68.82:1137,69,0	1/1:9,18:28:21.07:503,21,0	1/1:7,4:11:15.92:392,16,0	1/1:18,2:19:20.99:354,21,0	1/1:23,7:31:59.49:906,59,0	1/1:34,6:43:67.21:901,67,0	1/1:28,0:32:28.47:330,28,0	0/0:17,0:18:29.88:0,30,459	0/0:23,0:23:33.04:0,33,452	1/1:20,11:33:65.66:1292,66,0	0/1:19,4:25:0.24:700,0,0	1/1:18,8:28:47.96:819,48,0	1/1:13,2:14:20.96:347,21,0
chr10	81522428	.	A	ATG	20797.51	PASS	AB=0.600;AC=45;AF=0.804;AN=56;BaseQRankSum=-11.791;DP=715;FS=7.211;HRun=0;HaplotypeScore=89.5312;InbreedingCoeff=0.9058;MQ=65.76;MQ0=8;MQRankSum=-2.200;QD=35.43;ReadPosRankSum=7.236;VQSLOD=6.5919;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:58.92:0,59,777	0/0:6,0:6:18.06:0,18,233	0/0:36,0:30:49.50:0,49,583	0/0:24,0:17:25.69:0,26,373	1/1:1,23:24:60.21:1017,60,0	1/1:2,23:25:60.21:1019,60,0	0/1:8,16:24:6.05:452,0,6	0/0:32,0:32:81.18:0,81,968	1/1:3,31:33:63.22:1070,63,0	1/1:5,30:36:90.22:1358,90,0	1/1:1,24:25:57.20:968,57,0	1/1:1,15:16:42.14:713,42,0	1/1:1,28:29:60.21:1019,60,0	1/1:4,23:25:45.15:764,45,0	1/1:0,33:33:69.24:1172,69,0	1/1:0,26:26:63.22:1070,63,0	1/1:2,20:22:57.20:968,57,0	1/1:2,15:17:47.53:770,48,0	1/1:2,20:22:60.18:955,60,0	1/1:4,32:35:75.26:1273,75,0	1/1:3,25:29:57.67:969,58,0	1/1:4,17:22:42.14:695,42,0	1/1:4,23:28:48.05:815,48,0	1/1:3,22:25:54.18:916,54,0	1/1:2,24:26:54.18:917,54,0	1/1:2,16:19:51.11:778,51,0	1/1:3,20:24:36.01:611,36,0	1/1:0,16:16:30.10:510,30,0
chr10	81524416	.	G	GT	8125.41	PASS	AB=1.000;AC=29;AF=0.537;AN=54;BaseQRankSum=-6.141;DP=459;FS=0.000;HRun=6;HaplotypeScore=93.4138;InbreedingCoeff=0.8746;MQ=62.24;MQ0=4;MQRankSum=-3.682;QD=29.87;ReadPosRankSum=1.212;VQSLOD=4.9250;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:38.99:0,39,391	0/0:10,0:10:27.05:0,27,269	0/0:17,0:12:23.27:0,23,159	0/1:20,0:11:16.43:16,0,113	1/1:6,33:40:99:1282,105,0	0/0:16,0:16:14.25:0,14,37	0/0:13,0:13:26.76:0,27,146	0/0:30,0:30:69.14:0,69,703	0/0:9,0:9:4.66:0,5,12	1/1:3,25:28:75.24:941,75,0	1/1:2,13:15:45.09:547,45,0	0/0:13,0:13:5.55:0,6,14	0/0:10,0:10:11.43:0,11,47	0/0:13,0:13:20.06:0,20,125	1/1:4,7:11:24.01:281,24,0	1/1:0,11:11:33.11:415,33,0	1/1:2,12:14:30.10:375,30,0	1/1:4,6:10:20.74:237,21,0	1/1:3,13:16:45.12:550,45,0	1/1:4,19:23:63.15:762,63,0	1/1:1,5:6:12.03:143,12,0	0/0:9,0:9:15.37:0,15,91	0/0:21,0:21:17.05:0,17,47	./.	1/1:4,12:17:47.82:507,48,0	1/1:5,15:20:54.14:644,54,0	1/1:6,23:28:84.16:1006,84,0	1/1:0,11:12:36.05:419,36,0
chr10	81524421	.	TTG	T	1666.82	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=1.843;DP=475;FS=4.221;HRun=0;HaplotypeScore=123.7586;InbreedingCoeff=0.4787;MQ=60.03;MQ0=4;MQRankSum=-2.790;QD=15.43;ReadPosRankSum=-2.322;VQSLOD=3.2724;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:48.15:0,48,775	0/0:9,0:9:27.08:0,27,435	0/0:17,0:11:11.50:0,12,192	0/0:20,0:11:2.17:0,2,154	0/0:42,0:42:99:0,100,901	1/1:2,12:14:30.08:421,30,0	0/1:15,0:15:35.36:101,0,35	0/0:26,0:26:75.18:0,75,1160	1/1:1,9:10:15.01:177,15,0	0/0:29,0:29:60.29:0,60,562	0/0:19,0:19:36.07:0,36,384	1/1:0,3:11:12.02:153,12,0	0/1:11,0:11:15.61:80,0,16	0/1:16,0:16:8.92:122,0,9	0/0:11,0:11:24.13:0,24,206	0/0:12,0:12:32.91:0,33,262	0/0:13,0:12:29.38:0,29,229	0/0:9,0:9:19.59:0,20,169	0/0:22,0:22:43.26:0,43,421	0/0:22,0:22:54.65:0,55,441	0/0:6,0:6:1.51:0,2,61	0/1:11,0:11:13.39:66,0,13	1/1:11,8:20:58.36:715,58,0	0/0:4,0:4:2.80:0,3,13	0/0:18,0:18:23.27:0,23,352	0/0:21,0:21:4.77:0,5,332	0/0:31,0:30:76.47:0,76,626	0/0:16,0:16:38.39:0,38,309
chr10	81524422	.	TG	T	1122.26	PASS	AB=0.947;AC=17;AF=0.304;AN=56;BaseQRankSum=3.169;DP=476;FS=2.000;HRun=1;HaplotypeScore=121.3968;InbreedingCoeff=0.6058;MQ=58.71;MQ0=4;MQRankSum=-1.444;QD=7.53;ReadPosRankSum=-2.480;VQSLOD=-0.0535;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:48.12:0,48,612	0/0:9,0:9:27.08:0,27,351	0/1:16,0:10:16.14:16,0,112	0/1:20,0:11:39.21:39,0,86	0/0:43,0:43:92.46:0,92,506	1/1:13,0:14:26.83:194,27,0	0/1:11,3:14:4:118,0,4	0/0:26,0:26:78.13:0,78,955	1/1:10,0:10:11.86:69,12,0	0/0:29,0:29:59.96:0,60,315	0/0:20,0:20:24.31:0,24,198	1/1:11,0:11:11.84:77,12,0	1/1:10,1:11:20.34:121,20,0	1/1:16,1:17:16.40:149,16,0	0/0:12,0:12:20.83:0,21,128	0/0:12,0:12:29.79:0,30,133	0/0:13,0:12:29.61:0,30,137	0/0:9,0:9:21.74:0,22,132	0/0:22,0:22:42.68:0,43,281	0/0:21,0:21:44.12:0,44,243	0/0:5,0:5:0.36:0,0,25	0/1:9,1:10:1.32:87,0,1	1/1:20,0:21:57.75:411,58,0	0/1:5,0:5:4.59:31,0,5	0/0:18,0:18:13.89:0,14,204	0/0:21,0:21:6.60:0,7,206	0/0:31,0:30:63.60:0,64,346	0/0:16,0:16:39.51:0,40,208
chr10	81524430	.	TTTTTG	T	1620.38	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-2.306;DP=491;FS=1.449;HRun=0;HaplotypeScore=152.9520;InbreedingCoeff=0.3567;MQ=59.93;MQ0=7;MQRankSum=-1.715;QD=9.76;ReadPosRankSum=-6.262;VQSLOD=-0.0254;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:50.76:0,51,1111	0/0:9,0:9:6.68:0,7,565	0/0:21,0:12:18.52:0,19,252	0/1:20,0:11:16.28:16,0,155	0/0:46,0:46:48.74:0,49,2034	1/1:9,6:15:36.04:545,36,0	0/1:16,0:16:33.63:34,0,150	0/0:25,0:25:63.26:0,63,896	1/1:7,3:10:15.05:244,15,0	0/0:29,0:29:23.74:0,24,1096	0/1:20,0:20:3.38:3,0,782	1/1:9,3:12:14.92:217,15,0	0/1:10,0:9:8.32:8,0,100	0/1:16,0:16:35.99:36,0,115	0/1:15,0:14:15.76:16,0,425	0/0:12,0:12:21.96:0,22,494	0/0:11,0:10:27:0,27,513	0/0:9,0:9:17.99:0,18,270	0/0:22,0:22:6.17:0,6,834	0/0:20,0:20:39.95:0,40,944	0/0:5,0:5:7.17:0,7,180	0/1:10,0:10:37.03:63,0,37	1/1:10,6:16:22.14:540,22,0	1/1:6,0:6:8.96:79,9,0	0/0:19,0:19:5.81:0,6,737	0/0:22,0:22:5.31:0,5,664	0/0:35,0:33:40.21:0,40,1421	0/0:18,0:18:24.87:0,25,585
chr10	81524433	.	TTG	T	1985.09	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-1.926;DP=489;FS=0.813;HRun=0;HaplotypeScore=125.0746;InbreedingCoeff=0.5048;MQ=59.93;MQ0=7;MQRankSum=-0.269;QD=8.74;ReadPosRankSum=-4.907;VQSLOD=2.0865;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:53.57:0,54,701	0/0:8,0:8:10.61:0,11,301	0/0:21,0:12:20.28:0,20,161	0/1:20,0:11:16.83:17,0,98	0/0:47,0:47:23.37:0,23,877	1/1:15,0:15:30.94:272,31,0	1/1:15,1:16:39.67:365,40,0	0/0:25,0:25:51.54:0,52,378	1/1:9,0:9:14.87:106,15,0	0/1:33,0:33:80.18:80,0,540	0/0:19,0:19:11.39:0,11,333	1/1:12,0:12:13.05:100,13,0	1/1:9,1:9:16.80:178,17,0	1/1:13,3:16:28.73:435,29,0	0/1:15,0:14:7.08:7,0,166	0/0:12,0:12:18.77:0,19,257	0/0:10,0:9:26.92:0,27,258	0/0:11,0:11:16.85:0,17,122	0/1:22,0:22:15.04:15,0,348	0/0:18,0:18:42.71:0,43,460	0/1:5,0:5:10.75:11,0,94	1/1:7,3:10:25.20:274,25,0	1/1:16,0:16:15.44:279,15,0	0/1:7,0:7:3.19:17,0,3	0/0:17,0:17:22.27:0,22,272	0/1:21,0:21:31.21:31,0,327	0/0:34,0:32:45.29:0,45,655	0/0:17,0:17:19.56:0,20,239
chr10	81524435	.	G	GTT	6480.34	PASS	AB=0.885;AC=37;AF=0.661;AN=56;BaseQRankSum=-2.866;DP=495;FS=7.946;HRun=12;HaplotypeScore=115.7557;InbreedingCoeff=0.4528;MQ=59.76;MQ0=7;MQRankSum=-2.732;QD=17.14;ReadPosRankSum=-3.407;VQSLOD=2.6754;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:34.40:0,34,360	0/1:7,0:8:1.32:1,0,121	0/0:21,0:12:1.53:0,2,85	0/0:19,0:10:9.75:0,10,70	1/1:17,26:47:99:1283,111,0	1/1:16,0:17:6.71:40,7,0	0/0:16,0:16:14.69:0,15,60	0/0:4,0:24:15.90:0,16,161	1/1:9,0:9:6.17:28,6,0	1/1:27,4:32:52.93:598,53,0	1/1:6,13:21:45.43:566,45,0	0/1:11,0:12:9.96:10,0,24	0/1:12,0:11:16.40:16,0,19	0/0:15,0:15:9.78:0,10,56	1/1:4,8:16:35:362,35,0	1/1:7,4:11:21.05:261,21,0	1/1:6,4:9:15.04:193,15,0	0/1:3,7:11:3.08:76,0,3	1/1:11,7:20:46.15:509,46,0	1/1:9,8:18:41.58:489,42,0	0/1:4,0:5:12.95:13,0,22	0/1:10,0:10:16.80:24,0,17	0/1:15,0:16:3.43:3,0,43	1/1:2,0:7:7.67:33,8,0	1/1:13,6:19:43.76:491,44,0	1/1:11,12:23:44.47:457,44,0	1/1:19,15:33:32.27:587,32,0	1/1:7,11:18:35.59:439,36,0
chr10	81529393	.	C	CTTT	23579.40	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-7.575;DP=571;FS=0.000;HRun=7;HaplotypeScore=75.7246;InbreedingCoeff=0.9944;MQ=67.52;MQ0=0;MQRankSum=-3.954;QD=48.52;ReadPosRankSum=3.205;VQSLOD=4.7339;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:35.97:0,36,465	0/0:8,0:8:21.06:0,21,287	0/0:19,0:19:29.70:0,30,369	0/0:13,0:13:18.04:0,18,244	1/1:5,20:26:57.19:1140,57,0	1/1:0,18:18:48.16:995,48,0	1/1:4,17:23:55.43:1122,55,0	0/0:30,0:30:72.22:0,72,981	1/1:3,21:24:60.21:1221,60,0	1/1:1,29:30:87.29:1753,87,0	1/1:1,25:26:75.19:1465,75,0	1/1:3,13:18:35.78:665,36,0	1/1:4,17:22:54.18:1080,54,0	1/1:1,14:15:33.11:684,33,0	1/1:1,17:20:44.68:854,45,0	1/1:3,13:17:36.10:686,36,0	1/1:3,14:17:36.12:747,36,0	1/1:5,13:19:39.13:809,39,0	1/1:8,12:23:57.20:1150,57,0	1/1:2,31:35:90.20:1680,90,0	1/1:0,13:13:36.12:747,36,0	1/1:0,21:21:63.17:1264,63,0	1/1:1,15:17:42.02:870,42,0	1/1:2,11:14:24.08:475,24,0	1/1:2,14:17:36.12:741,36,0	1/1:3,26:29:81.27:1588,81,0	1/1:5,24:31:72.25:1470,72,0	1/1:2,6:11:18.06:373,18,0
chr10	81530250	.	AT	A	3883.39	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.253;DP=531;FS=6.065;HRun=6;HaplotypeScore=49.6028;InbreedingCoeff=0.9937;MQ=74.73;MQ0=0;MQRankSum=-1.240;QD=26.97;ReadPosRankSum=2.856;VQSLOD=4.1036;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:36.07:0,36,454	0/0:17,0:17:48.13:0,48,601	0/0:18,0:17:46.34:0,46,524	0/0:11,0:11:20.50:0,20,219	0/0:25,0:25:75.23:0,75,972	1/1:4,18:22:48.12:515,48,0	1/1:0,13:13:39.10:419,39,0	0/0:33,0:33:84.26:0,84,1079	1/1:0,16:16:45.11:484,45,0	0/0:29,0:29:87.27:0,87,1121	0/0:18,0:18:48.12:0,48,599	1/1:1,15:16:39.10:419,39,0	1/1:0,12:12:30.08:322,30,0	1/1:1,11:12:32.75:333,33,0	0/0:19,0:19:57.19:0,57,749	0/0:20,1:21:24.94:0,25,677	0/0:28,0:28:81.19:0,81,1020	0/0:20,0:20:57.19:0,57,749	0/0:14,0:14:42.12:0,42,536	0/0:27,0:27:78.18:0,78,993	0/0:5,0:5:12.04:0,12,158	1/1:1,22:23:54.01:552,54,0	1/1:1,20:21:54.13:580,54,0	1/1:0,9:9:24.06:258,24,0	0/0:20,0:20:57.16:0,57,733	0/0:21,0:21:63.19:0,63,798	0/0:31,0:31:87.28:0,87,1145	0/0:16,0:16:45.15:0,45,592
chr10	81530633	.	T	TA	6518.19	PASS	AB=0.610;AC=26;AF=0.464;AN=56;BaseQRankSum=-15.402;DP=540;FS=5.787;HRun=9;HaplotypeScore=82.5444;InbreedingCoeff=0.8606;MQ=74.40;MQ0=1;MQRankSum=6.459;QD=22.32;ReadPosRankSum=1.835;VQSLOD=5.7379;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,1:24:29.78:0,30,484	0/0:7,0:7:17.98:0,18,153	0/0:24,0:19:35.56:0,36,289	0/0:12,0:13:7.04:0,7,58	1/1:8,23:31:43.13:704,43,0	0/0:4,0:21:35.10:0,35,103	0/0:3,0:17:28.98:0,29,85	0/0:33,0:32:71.93:0,72,614	0/0:3,0:15:24.44:0,24,71	1/1:6,14:20:39.07:419,39,0	1/1:6,22:28:16.41:584,16,0	0/0:5,0:21:34.62:0,35,102	0/0:4,0:17:27.42:0,27,80	0/0:3,0:14:22.41:0,22,65	1/1:5,12:17:33.09:365,33,0	1/1:6,15:21:16.06:405,16,0	1/1:2,24:26:63.17:697,63,0	1/1:4,12:16:33.09:364,33,0	1/1:10,14:24:42.07:444,42,0	1/1:2,17:19:39.19:519,39,0	0/1:3,7:10:5:178,0,5	0/0:3,0:12:18.80:0,19,55	0/0:5,0:18:26.95:0,27,79	0/0:4,0:12:10.17:0,10,30	1/1:4,16:20:22.07:472,22,0	1/1:6,21:27:43.28:682,43,0	0/1:10,14:24:6.99:386,0,7	1/1:0,9:9:27.07:299,27,0
chr10	81530651	.	A	AT	4739.43	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=3.276;DP=550;FS=5.209;HRun=5;HaplotypeScore=90.3610;InbreedingCoeff=0.9951;MQ=71.68;MQ0=1;MQRankSum=-8.028;QD=29.62;ReadPosRankSum=-0.587;VQSLOD=4.8715;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:52.12:0,52,618	0/0:10,0:10:30.05:0,30,311	0/0:21,0:14:19.52:0,20,168	0/0:13,0:13:16.77:0,17,160	0/0:28,0:28:81.01:0,81,831	1/1:5,15:20:48.14:615,48,0	1/1:2,17:19:45.13:574,45,0	0/0:38,0:38:99:0,99,1053	1/1:3,16:19:51.08:630,51,0	0/0:22,0:22:51.11:0,51,537	0/0:22,0:22:59.78:0,60,595	1/1:4,15:19:54.09:671,54,0	1/1:5,19:25:56.84:702,57,0	1/1:3,14:17:36.12:472,36,0	0/0:17,0:17:45.05:0,45,453	0/0:20,0:20:48.10:0,48,503	0/0:28,0:28:75.15:0,75,788	0/0:14,0:14:36.09:0,36,387	0/0:21,0:21:54.09:0,54,558	0/0:16,0:16:36.98:0,37,409	0/0:9,0:9:21.05:0,21,226	1/1:4,9:13:33.01:396,33,0	1/1:3,15:18:39.13:509,39,0	1/1:3,6:10:17.36:171,17,0	0/0:22,0:22:60.13:0,60,629	0/0:29,0:29:87.18:0,87,907	0/0:26,0:25:69.03:0,69,689	0/0:13,0:13:33.08:0,33,354
chr10	81531341	.	GA	G	1859.12	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=7.563;DP=553;FS=1.372;HRun=10;HaplotypeScore=59.6197;InbreedingCoeff=0.8195;MQ=72.69;MQ0=0;MQRankSum=-0.019;QD=18.41;ReadPosRankSum=2.825;VQSLOD=4.4016;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,1:20:48.59:0,49,523	0/0:8,0:8:24.05:0,24,257	0/0:12,0:12:1.38:0,1,154	0/1:11,0:10:9.61:10,0,78	0/0:26,1:28:48.98:0,49,751	1/1:2,26:28:71.98:625,72,0	0/0:21,0:22:56.97:0,57,603	0/0:31,2:34:20.07:0,20,671	1/1:1,13:14:35.99:313,36,0	0/0:21,0:21:48.13:0,48,531	0/0:21,1:22:31.08:0,31,556	1/1:1,11:12:29.99:260,30,0	0/0:13,0:13:33.09:0,33,365	0/0:13,0:13:39.11:0,39,431	0/0:15,1:16:13.03:0,13,356	0/0:26,0:29:80.72:0,81,839	0/0:17,0:17:48.13:0,48,531	0/0:14,0:14:36.08:0,36,389	0/0:33,1:36:34.90:0,35,770	0/0:20,2:22:5.04:0,5,512	0/0:16,0:16:48.12:0,48,524	0/0:12,0:12:33.09:0,33,363	1/1:1,16:17:14.71:357,15,0	1/1:0,19:19:53.99:469,54,0	0/0:29,0:29:78.19:0,78,847	0/0:20,1:21:31.07:0,31,553	0/0:32,1:33:58.15:0,58,855	0/0:13,0:13:36.08:0,36,388
chr10	81532126	.	GATATATATATATATATAT	G	2774.03	PASS	AC=10;AF=0.217;AN=46;BaseQRankSum=2.242;DP=270;FS=7.330;HRun=0;HaplotypeScore=136.3862;InbreedingCoeff=0.5556;MQ=66.11;MQ0=8;MQRankSum=-4.272;QD=48.67;ReadPosRankSum=2.801;VQSLOD=2.3916;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:3.01:0,3,56	0/0:1,0:2:3.01:0,3,197	0/0:38,0:11:9.03:0,9,126	0/0:54,0:15:10.58:0,11,134	0/0:8,0:10:15.02:0,15,256	1/1:6,5:14:24.08:1090,24,0	./.	0/0:26,0:32:7.02:0,7,393	1/1:4,10:15:12.04:551,12,0	0/0:5,0:7:12.16:0,12,322	0/0:2,0:2:3.01:0,3,79	1/1:9,11:19:21.07:978,21,0	0/0:1,0:2:3.01:0,3,115	0/0:1,0:3:6.02:0,6,151	./.	0/0:0,0:1:3.01:0,3,156	0/0:7,0:13:8.83:0,9,314	0/0:5,0:8:9.03:0,9,327	0/0:6,0:9:12.06:0,12,347	0/0:3,0:3:3.01:0,3,56	./.	./.	1/1:4,1:5:3.01:148,3,0	1/1:1,2:3:3.01:148,3,0	./.	0/0:2,0:2:3.01:0,3,101	0/0:2,0:5:12.04:0,12,244	0/0:6,0:11:24.06:0,24,1080
chr10	81533644	.	A	AT	8200.27	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-3.595;DP=674;FS=7.199;HRun=1;HaplotypeScore=72.8237;InbreedingCoeff=0.9909;MQ=85.18;MQ0=0;MQRankSum=-6.391;QD=41.00;ReadPosRankSum=-0.917;VQSLOD=4.8321;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,1558	0/0:15,0:15:42.14:0,42,545	0/0:20,0:20:57.16:0,57,707	0/0:26,0:26:71.49:0,71,867	0/0:25,0:25:75.24:0,75,970	1/1:1,26:27:81.27:1206,81,0	1/1:1,26:27:75.25:1124,75,0	0/0:38,0:38:99:0,105,1306	1/1:0,19:19:57.19:848,57,0	0/0:34,0:33:96.29:0,96,1231	0/0:21,0:21:63.19:0,63,802	1/1:2,21:23:66.22:980,66,0	1/1:1,31:32:81.27:1214,81,0	1/1:0,15:15:42.14:629,42,0	0/0:27,0:27:78.25:0,78,1012	0/0:16,0:16:48.14:0,48,608	0/0:33,0:33:93.27:0,93,1178	0/0:20,0:20:57.19:0,57,740	0/0:18,0:18:54.18:0,54,701	0/0:26,0:26:72.22:0,72,921	0/0:29,0:29:87.28:0,87,1129	1/1:0,19:19:48.16:719,48,0	1/1:1,15:16:48.12:693,48,0	1/1:2,20:22:57.06:787,57,0	0/0:24,0:24:72.23:0,72,935	0/0:23,0:23:63.20:0,63,818	0/0:33,0:32:99:0,99,1270	0/0:3,0:3:9.03:0,9,117
chr10	81533671	.	G	GA	2536.44	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=1.944;DP=700;FS=0.440;HRun=7;HaplotypeScore=89.9272;InbreedingCoeff=0.9962;MQ=83.24;MQ0=0;MQRankSum=-7.625;QD=21.68;ReadPosRankSum=-0.020;VQSLOD=2.9440;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,1144	0/0:12,0:12:33.04:0,33,313	0/0:22,0:22:51.06:0,51,487	0/0:24,0:25:50.95:0,51,476	0/0:32,0:32:90.14:0,90,869	1/1:4,19:23:42.09:491,42,0	0/0:29,0:29:69.09:0,69,660	0/0:36,0:36:90.12:0,90,864	1/1:2,20:22:42.09:491,42,0	0/0:26,0:26:72.11:0,72,695	0/0:24,0:24:72.12:0,72,695	1/1:3,23:26:60.11:693,60,0	0/0:29,0:29:72.11:0,72,695	0/0:18,0:18:51.08:0,51,493	0/0:31,0:31:90.13:0,90,863	0/0:18,0:18:45.07:0,45,434	0/0:39,0:39:99:0,105,1000	0/0:21,0:21:48.07:0,48,463	0/0:18,0:18:45.06:0,45,431	0/0:28,0:28:75.10:0,75,719	0/0:27,1:28:35.82:0,36,620	0/0:19,0:19:51.08:0,51,492	1/1:3,18:21:45.05:511,45,0	1/1:7,18:25:45.10:527,45,0	0/0:19,0:19:54.09:0,54,521	0/0:23,0:23:69.11:0,69,666	0/0:38,0:37:99:0,105,1014	0/0:5,0:5:15.02:0,15,145
chr10	81534530	.	TG	T	6694.56	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=8.678;DP=706;FS=1.791;HRun=3;HaplotypeScore=100.5729;InbreedingCoeff=0.9996;MQ=82.41;MQ0=0;MQRankSum=-2.859;QD=32.50;ReadPosRankSum=3.516;VQSLOD=4.9114;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,153,2180	0/0:9,0:9:24.08:0,24,345	0/0:15,0:15:45.15:0,45,637	0/0:23,0:23:61.43:0,61,844	0/0:29,0:29:81.25:0,81,1129	1/1:0,21:21:54.17:669,54,0	1/1:0,25:25:69.22:856,69,0	0/0:44,0:44:99:0,129,1827	1/1:0,23:23:66.21:818,66,0	0/0:22,0:22:63.21:0,63,907	0/0:11,0:11:33.11:0,33,465	1/1:0,25:25:66.21:818,66,0	1/1:0,26:26:72.23:892,72,0	1/1:0,18:18:42.13:521,42,0	0/0:30,0:30:81.27:0,81,1164	0/0:32,1:33:59.08:0,59,1274	0/0:31,0:31:93.27:0,93,1300	0/0:34,0:34:99:0,102,1466	0/0:22,0:22:54.18:0,54,776	0/0:18,0:18:45.15:0,45,645	0/0:29,0:29:87.29:0,87,1253	1/1:2,16:18:36.11:446,36,0	1/1:0,14:14:39.12:484,39,0	1/1:1,35:36:96.30:1190,96,0	0/0:41,0:41:99:0,123,1753	0/0:22,0:21:66.19:0,66,898	0/0:22,0:22:66.21:0,66,933	0/0:12,0:12:33.10:0,33,451
chr10	81536242	.	GGGGA	G	2923.73	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-1.789;DP=408;FS=5.054;HRun=0;HaplotypeScore=90.2329;InbreedingCoeff=0.9238;MQ=79.58;MQ0=2;MQRankSum=-2.712;QD=37.01;ReadPosRankSum=6.015;VQSLOD=3.3557;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39.11:0,39,816	0/0:7,0:7:21.05:0,21,384	0/0:21,0:20:52.57:0,53,832	0/0:32,0:27:50.70:0,51,983	0/0:9,0:9:17.99:0,18,218	0/0:32,0:32:96.30:0,96,2154	1/1:0,18:18:39.13:683,39,0	0/0:9,0:9:23.96:0,24,238	0/0:21,0:21:63.20:0,63,1418	0/0:10,0:10:15.52:0,16,290	0/0:4,0:4:12.02:0,12,195	0/0:16,0:16:48.08:0,48,1065	1/1:1,22:23:60.02:1051,60,0	1/1:1,14:15:33.11:574,33,0	0/0:11,0:11:30.09:0,30,566	0/0:11,0:11:15:0,15,288	0/0:11,0:11:24:0,24,496	0/0:3,0:3:3.01:0,3,65	0/0:7,0:7:18.05:0,18,280	0/0:13,0:13:33.22:0,33,452	0/0:12,0:11:27.05:0,27,370	1/1:3,20:23:45.12:777,45,0	0/0:22,0:22:66.23:0,66,1567	0/0:24,0:24:72.17:0,72,1487	0/0:13,0:13:26.99:0,27,424	0/0:8,0:8:18.04:0,18,395	0/0:9,0:9:14.76:0,15,156	0/0:10,0:10:30.04:0,30,500
chr10	81536704	.	CA	C	1870.79	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.351;DP=630;FS=9.957;HRun=9;HaplotypeScore=59.4231;InbreedingCoeff=0.9940;MQ=77.45;MQ0=0;MQRankSum=0.840;QD=21.50;ReadPosRankSum=1.567;VQSLOD=4.0787;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:57.16:0,57,648	0/0:15,0:15:39.12:0,39,450	0/0:19,0:19:33.07:0,33,347	0/0:10,0:10:14.83:0,15,130	0/0:48,0:48:99:0,117,1318	0/0:23,0:23:69.19:0,69,785	1/1:2,19:21:51.03:467,51,0	0/0:15,0:15:42.10:0,42,467	0/0:16,0:16:39.12:0,39,450	0/0:32,0:32:78.22:0,78,887	0/0:34,0:34:90.26:0,90,1030	0/0:16,0:16:45.12:0,45,511	1/1:1,19:20:51.03:467,51,0	1/1:0,20:20:51.03:467,51,0	0/0:22,0:22:57.16:0,57,650	0/0:26,0:26:66.18:0,66,745	0/0:23,0:23:63.17:0,63,717	0/0:16,0:16:39.12:0,39,450	0/0:29,0:29:78.16:0,78,860	0/0:38,0:38:99:0,108,1231	0/0:13,0:13:30.09:0,30,346	1/1:2,24:26:69.03:631,69,0	0/0:23,0:23:60.18:0,60,692	0/0:17,0:17:45.12:0,45,508	0/0:17,0:17:45.13:0,45,519	0/0:31,0:31:93.25:0,93,1043	0/0:30,0:30:75.12:0,75,817	0/0:7,0:7:21.06:0,21,242
chr10	81537587	.	A	AT	10106.18	PASS	AB=0.529;AC=27;AF=0.482;AN=56;BaseQRankSum=-6.783;DP=686;FS=1.330;HRun=9;HaplotypeScore=66.9362;InbreedingCoeff=0.9195;MQ=71.41;MQ0=0;MQRankSum=-0.420;QD=25.59;ReadPosRankSum=0.702;VQSLOD=5.4481;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:77.97:0,78,677	0/0:17,0:17:47.96:0,48,410	0/0:13,0:12:17.94:0,18,150	0/0:10,0:10:2.99:0,3,145	1/1:6,37:43:99:1134,108,0	0/0:23,0:23:59.98:0,60,521	0/0:17,0:17:44.99:0,45,391	0/0:38,0:38:77.95:0,78,677	0/0:16,0:16:44.97:0,45,387	1/1:9,27:36:32.09:799,32,0	1/1:2,31:33:81.18:883,81,0	0/0:15,0:15:41.99:0,42,365	0/0:21,0:21:35.55:0,36,463	0/0:24,0:24:71.17:0,71,598	1/1:2,29:31:69.19:763,69,0	1/1:2,28:30:46.14:737,46,0	1/1:4,27:31:75.20:830,75,0	1/1:1,7:8:18.05:199,18,0	1/1:9,20:29:57.12:609,57,0	1/1:3,32:36:70.82:947,71,0	1/1:2,14:16:33.09:365,33,0	0/0:28,0:28:68.96:0,69,599	0/0:28,0:28:71.98:0,72,625	0/0:12,0:12:35.99:0,36,312	1/1:1,28:29:78.21:863,78,0	1/1:4,28:32:81.22:896,81,0	1/1:2,30:32:61.18:903,61,0	0/1:1,8:9:5:178,0,5
chr10	81537923	.	AT	A	2344.38	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.410;DP=585;FS=0.000;HRun=8;HaplotypeScore=59.9188;InbreedingCoeff=0.9977;MQ=78.08;MQ0=0;MQRankSum=-1.319;QD=22.33;ReadPosRankSum=3.656;VQSLOD=4.0272;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.20:0,72,846	0/0:10,0:10:30.08:0,30,353	0/0:14,0:14:30.06:0,30,335	0/0:11,0:11:27.07:0,27,310	0/0:34,1:35:70.35:0,70,1127	1/1:2,22:24:57.09:550,57,0	0/0:16,0:16:36.10:0,36,424	0/0:28,0:28:75.21:0,75,886	1/1:0,22:22:57.09:550,57,0	0/0:22,0:22:57.16:0,57,671	0/0:24,0:24:63.19:0,63,761	1/1:2,19:21:51.08:492,51,0	0/0:19,0:19:51.16:0,51,616	0/0:24,0:24:69.20:0,69,824	0/0:12,0:12:30.09:0,30,362	0/0:27,2:29:20.28:0,20,786	0/0:12,0:12:30.07:0,30,347	0/0:15,0:15:33.08:0,33,384	0/0:31,0:31:84.24:0,84,996	0/0:29,0:29:81.24:0,81,969	0/0:12,0:12:36.11:0,36,434	0/0:15,0:15:42.10:0,42,483	1/1:2,23:25:66.11:637,66,0	1/1:2,11:13:30.05:290,30,0	0/0:25,0:24:66.19:0,66,778	0/0:28,0:28:81.25:0,81,978	0/0:35,0:35:99:0,102,1219	0/0:9,0:9:27.08:0,27,326
chr10	81538271	.	T	TA	3066.77	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-11.308;DP=561;FS=0.000;HRun=4;HaplotypeScore=49.8969;InbreedingCoeff=0.9981;MQ=80.12;MQ0=0;MQRankSum=-1.233;QD=31.29;ReadPosRankSum=2.670;VQSLOD=3.8107;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.19:0,66,749	0/0:11,0:11:27.07:0,27,306	0/0:18,0:18:45.06:0,45,471	0/0:16,0:16:19.30:0,19,358	0/0:27,0:27:69.20:0,69,782	1/1:2,25:27:63.21:862,63,0	0/0:18,0:18:51.14:0,51,579	0/0:25,0:25:69.18:0,69,773	1/1:2,18:20:45.15:616,45,0	0/0:29,0:29:87.22:0,87,965	0/0:29,0:29:81.23:0,81,918	1/1:2,15:17:42.14:575,42,0	0/0:13,0:13:39.11:0,39,442	0/0:16,0:16:48.12:0,48,534	0/0:17,0:17:42.12:0,42,476	0/0:22,0:22:57.14:0,57,637	0/0:20,0:20:60.15:0,60,669	0/0:13,0:13:33.09:0,33,373	0/0:24,0:24:69.17:0,69,764	0/0:27,0:27:75.16:0,75,826	0/0:11,0:11:30.04:0,30,318	0/0:15,0:15:39.11:0,39,442	1/1:0,20:20:54.18:739,54,0	1/1:0,14:14:33.11:451,33,0	0/0:27,0:27:81.22:0,81,909	0/0:20,0:20:60.15:0,60,664	0/0:22,0:22:63.18:0,63,714	0/0:19,0:19:48.13:0,48,535
chr10	81539397	.	G	GA	3597.97	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.221;DP=641;FS=0.000;HRun=8;HaplotypeScore=73.3295;InbreedingCoeff=0.9973;MQ=80.64;MQ0=0;MQRankSum=-2.463;QD=27.05;ReadPosRankSum=2.436;VQSLOD=4.2569;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:30.02:0,30,275	0/0:7,0:7:21.01:0,21,192	0/0:21,0:22:48.05:0,48,439	0/0:22,0:21:41.55:0,42,352	0/0:29,0:29:78.02:0,78,709	1/1:5,27:32:69.21:796,69,0	0/0:16,0:16:45.01:0,45,407	0/0:23,0:22:56.23:0,56,498	1/1:2,20:22:48.14:554,48,0	0/0:36,0:36:90.04:0,90,822	0/0:33,0:33:90.05:0,90,824	1/1:4,25:29:75.22:866,75,0	0/0:18,0:18:45.02:0,45,412	0/0:18,0:18:45.01:0,45,412	0/0:31,0:31:81.04:0,81,741	0/0:20,0:20:57.03:0,57,522	0/0:11,0:11:30.01:0,30,275	0/0:13,0:13:30.48:0,30,274	0/0:29,0:29:81.03:0,81,736	0/0:23,0:23:57.01:0,57,517	0/0:15,0:15:45.02:0,45,412	0/0:26,0:26:72.03:0,72,654	1/1:1,31:32:71.83:831,72,0	1/1:2,16:18:48.14:551,48,0	0/0:23,0:23:57:0,57,516	0/0:23,0:23:57.02:0,57,521	0/0:42,0:41:99:0,117,1062	0/0:17,1:18:19.44:0,19,432
chr10	81540607	.	GA	G	1061.76	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.716;DP=399;FS=14.745;HRun=9;HaplotypeScore=40.3622;InbreedingCoeff=0.9372;MQ=78.82;MQ0=0;MQRankSum=-0.556;QD=19.66;ReadPosRankSum=3.096;VQSLOD=2.4519;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.16:0,72,815	0/0:8,0:8:21.04:0,21,224	0/0:14,1:15:21.72:0,22,257	0/0:10,0:8:9.02:0,9,99	0/0:14,0:14:39.12:0,39,448	1/1:1,8:9:24.01:220,24,0	0/0:12,0:12:36.09:0,36,406	0/0:30,0:31:81.05:0,81,890	1/1:1,8:9:24.01:220,24,0	0/0:17,0:17:48.14:0,48,554	0/0:10,0:10:21.06:0,21,243	1/1:2,9:11:24.01:220,24,0	0/0:9,0:9:27.08:0,27,312	0/0:14,0:14:33.10:0,33,381	0/0:16,0:16:45.11:0,45,506	0/0:13,0:13:27.08:0,27,312	0/0:20,0:20:51.03:0,51,556	0/0:13,0:13:33.10:0,33,381	0/0:10,1:11:2.63:0,3,274	0/0:18,0:18:48.14:0,48,554	0/0:13,0:14:41.96:0,42,465	0/0:7,0:7:18.05:0,18,208	1/1:1,11:12:33.01:302,33,0	1/1:2,11:13:30.01:275,30,0	0/0:20,0:20:48.12:0,48,542	0/0:15,0:15:39.12:0,39,450	0/0:25,0:24:69.21:0,69,796	0/0:6,0:6:18.05:0,18,208
chr10	81540749	.	C	CATATATAT	6431.76	PASS	AB=0.800;AC=40;AF=0.833;AN=48;BaseQRankSum=0.327;DP=262;FS=2.591;HRun=0;HaplotypeScore=67.7538;InbreedingCoeff=0.4287;MQ=69.55;MQ0=0;MQRankSum=-5.501;QD=34.39;ReadPosRankSum=0.130;VQSLOD=4.4887;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:0.44:0,0,583	0/0:6,0:6:12.04:0,12,312	1/1:9,0:7:4.68:17,5,0	0/1:14,0:7:1.10:1,0,38	1/1:4,2:8:9.02:216,9,0	1/1:5,1:7:3.01:126,3,0	./.	0/0:38,0:40:65.96:0,66,1333	1/1:2,0:3:3.01:105,3,0	1/1:7,0:11:24.05:416,24,0	1/1:8,0:8:9.02:137,9,0	1/1:4,4:8:9.03:351,9,0	1/1:1,0:3:3:25,3,0	1/1:5,0:6:3.01:65,3,0	1/1:5,4:9:12.04:502,12,0	0/1:2,2:6:3.58:304,0,4	1/1:6,7:14:24.08:886,24,0	1/1:8,4:14:18.06:613,18,0	1/1:7,5:14:27.09:643,27,0	1/1:6,1:7:6.01:150,6,0	./.	./.	1/1:3,0:3:3.01:92,3,0	./.	1/1:5,5:10:9.03:377,9,0	1/1:5,3:9:12.04:393,12,0	1/1:5,2:8:6.02:198,6,0	1/1:3,6:14:27.08:813,27,0
chr10	81540825	.	G	GT	630.91	PASS	AB=0.909;AC=9;AF=0.161;AN=56;BaseQRankSum=4.871;DP=369;FS=13.538;HRun=0;HaplotypeScore=46.4161;InbreedingCoeff=0.8301;MQ=77.92;MQ0=0;MQRankSum=1.042;QD=15.02;ReadPosRankSum=0.125;VQSLOD=3.7854;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.17:0,51,713	0/0:10,0:10:30.10:0,30,420	0/0:10,0:10:30.02:0,30,352	0/0:8,0:8:23.66:0,24,278	0/0:15,0:15:42.14:0,42,573	0/0:16,0:16:43.33:0,43,241	1/1:2,10:12:19.91:230,20,0	0/0:35,0:35:99:0,102,1407	0/1:9,1:10:5.23:5,0,114	0/0:11,0:11:33.11:0,33,461	0/0:12,0:12:36.12:0,36,503	0/0:10,0:10:27.50:0,27,152	1/1:1,7:8:24.02:245,24,0	1/1:1,3:4:9.02:94,9,0	0/0:7,0:7:21.07:0,21,294	0/0:10,0:10:27.09:0,27,378	0/0:26,0:26:72.24:0,72,1006	0/0:14,0:14:36.05:0,36,474	0/0:18,0:18:48.16:0,48,662	0/0:16,0:16:48.16:0,48,670	0/0:4,0:4:12.04:0,12,168	1/1:1,7:8:7.52:209,8,0	0/0:3,0:3:8.79:0,9,51	0/0:7,0:7:20.46:0,20,118	0/0:17,0:17:48.16:0,48,671	0/0:18,0:17:54.17:0,54,729	0/0:17,0:17:45.15:0,45,629	0/0:25,0:25:66.21:0,66,905
chr10	81542298	.	CAA	C	9137.42	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-4.039;DP=581;FS=9.618;HRun=11;HaplotypeScore=95.0649;InbreedingCoeff=0.9664;MQ=70.24;MQ0=1;MQRankSum=-4.097;QD=18.02;ReadPosRankSum=7.221;VQSLOD=2.7485;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:42:70.96:359,71,0	0/0:7,0:8:21.06:0,21,285	0/0:26,0:15:24.01:0,24,329	0/0:22,0:16:34.30:0,34,315	1/1:7,33:40:81.12:861,81,0	1/1:1,0:24:57.63:251,58,0	1/1:2,0:14:30.18:132,30,0	0/0:3,0:17:30.13:0,30,106	1/1:2,0:12:24.17:102,24,0	1/1:4,18:22:57.11:593,57,0	1/1:6,21:27:51.06:543,51,0	1/1:2,0:16:27.40:120,27,0	1/1:2,0:19:38.41:167,38,0	1/1:2,0:13:21.95:96,22,0	1/1:7,16:23:33.07:351,33,0	1/1:3,23:27:62.89:651,63,0	1/1:0,21:21:54.05:560,54,0	1/1:0,13:13:36.09:383,36,0	1/1:7,9:17:20.71:245,21,0	1/1:2,29:31:84.19:892,84,0	1/1:1,14:15:33.08:351,33,0	1/1:1,0:10:15.38:87,15,0	1/1:2,0:27:64.14:274,64,0	1/1:1,0:14:27.29:120,27,0	1/1:2,19:21:50.92:543,51,0	1/1:2,27:30:72.11:819,72,0	1/1:3,21:24:54.13:575,54,0	1/1:1,4:5:6.90:65,7,0
chr10	81542806	.	C	CA	2279.35	PASS	AB=0.828;AC=43;AF=0.768;AN=56;BaseQRankSum=1.541;DP=463;FS=13.941;HRun=12;HaplotypeScore=100.0045;InbreedingCoeff=0.3555;MQ=30.18;MQ0=38;MQRankSum=-0.796;QD=6.05;ReadPosRankSum=-0.002;VQSLOD=0.7430;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,9:19:3.74:70,4,0	0/0:11,0:10:14.19:0,14,92	0/0:22,0:2:2.96:0,3,22	0/0:26,0:2:2.37:0,2,8	0/1:22,6:28:5.63:80,0,6	1/1:16,0:14:26.66:184,27,0	1/1:13,0:9:8.93:63,9,0	0/0:15,0:24:19.93:0,20,59	1/1:10,0:5:5.95:42,6,0	1/1:21,3:23:7.89:159,8,0	1/1:23,8:31:32.46:290,32,0	1/1:13,0:10:8.87:61,9,0	1/1:7,0:6:10.07:65,10,0	1/1:12,0:10:13.10:84,13,0	0/1:9,3:12:6.37:71,0,6	1/1:6,2:7:6.87:54,7,0	0/1:10,8:13:9.72:61,0,10	1/1:9,3:11:10.82:86,11,0	1/1:9,1:11:11.82:89,12,0	1/1:21,3:23:11.25:193,11,0	0/1:9,0:4:0:0,0,0	1/1:5,0:5:11.66:70,12,0	1/1:16,0:13:5.96:44,6,0	1/1:10,0:8:5.58:32,6,0	1/1:16,8:25:10.14:202,10,0	1/1:17,5:21:37.33:294,37,0	0/1:13,3:15:14.99:80,0,15	1/1:8,2:8:6.01:57,6,0
chr10	81542810	.	A	AG	607.82	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=4.170;DP=453;FS=9.158;HRun=0;HaplotypeScore=101.3891;InbreedingCoeff=0.3410;MQ=29.98;MQ0=42;MQRankSum=-1.138;QD=4.28;ReadPosRankSum=5.564;VQSLOD=2.4719;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:19:16.13:0,16,169	0/0:13,0:12:29.90:0,30,292	0/0:22,0:2:2.97:0,3,27	0/0:26,0:2:2.68:0,3,11	0/0:29,0:28:49.92:0,50,373	1/1:2,11:12:29.88:362,30,0	0/0:14,0:10:1.54:0,2,19	0/0:23,0:20:53.62:0,54,390	1/1:1,7:3:6.02:78,6,0	0/0:22,0:21:15.82:0,16,206	0/1:32,0:32:16.89:17,0,164	1/1:7,5:9:14.70:129,15,0	0/1:6,0:5:0.71:1,0,9	0/0:13,0:10:5.42:0,5,47	0/0:12,0:12:10.94:0,11,134	0/1:6,0:6:2.16:2,0,29	0/0:17,0:13:0.54:0,1,102	0/1:13,0:12:1.02:1,0,61	0/0:11,0:11:15.90:0,16,147	0/0:23,0:22:19.68:0,20,225	0/0:9,0:4:5.93:0,6,40	0/1:5,0:5:2.97:3,0,6	1/1:5,11:13:9.26:121,9,0	1/1:5,4:7:2.67:38,3,0	0/0:25,0:24:2.20:0,2,179	0/1:22,0:21:8.20:8,0,125	0/0:15,0:14:21.17:0,21,207	0/0:13,0:8:0.62:0,1,81
chr10	81542811	.	A	AAAAAG	869.78	PASS	AB=0.884;AC=7;AF=0.125;AN=56;BaseQRankSum=1.163;DP=452;FS=8.599;HRun=0;HaplotypeScore=125.3831;InbreedingCoeff=0.5123;MQ=30.19;MQ0=42;MQRankSum=0.164;QD=18.12;ReadPosRankSum=1.050;VQSLOD=2.5163;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:18:25.27:0,25,175	0/0:13,0:12:27.38:0,27,314	0/0:22,0:2:3.01:0,3,51	0/0:26,0:2:0.37:0,0,1	0/0:29,0:28:51.82:0,52,351	0/0:13,0:12:24.66:0,25,166	0/1:7,6:11:7.54:220,0,8	0/0:22,0:19:48.33:0,48,530	0/0:8,0:3:5.91:0,6,46	0/0:22,0:21:43.75:0,44,315	0/0:31,0:31:58.49:0,58,356	0/0:12,0:9:12.05:0,12,66	1/1:4,2:6:12.04:258,12,0	0/1:12,0:9:5.74:301,0,6	0/0:13,0:13:20.71:0,21,167	0/0:6,0:6:8.57:0,9,56	0/0:17,0:13:14.03:0,14,142	0/0:13,0:12:9.73:0,10,69	0/0:11,0:11:19.27:0,19,137	0/0:23,0:22:46.95:0,47,320	0/0:9,0:4:5.93:0,6,40	1/1:5,0:5:12.03:207,12,0	0/0:16,0:13:12.12:0,12,67	0/1:9,0:7:2.21:17,0,2	0/0:25,0:24:36.06:0,36,268	0/0:22,0:21:46.20:0,46,321	0/0:15,0:14:18.72:0,19,134	0/0:13,0:8:14.39:0,14,93
chr10	81542815	.	A	AG	282.95	PASS	AB=0.945;AC=16;AF=0.286;AN=56;BaseQRankSum=5.290;DP=437;FS=19.289;HRun=0;HaplotypeScore=99.5604;InbreedingCoeff=0.0683;MQ=30.63;MQ0=41;MQRankSum=-0.813;QD=1.64;ReadPosRankSum=5.939;VQSLOD=0.5056;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:16:10.90:0,11,129	0/0:14,0:13:32.75:0,33,301	0/0:22,0:2:2.95:0,3,21	0/0:26,0:2:2.68:0,3,11	0/0:28,0:28:43.40:0,43,330	0/1:13,0:12:0.35:0,0,8	1/1:12,4:13:1.92:104,2,0	0/0:22,0:19:38.69:0,39,318	1/1:7,0:2:0.94:2,1,0	0/0:19,0:18:11.49:0,11,168	0/1:29,0:29:22.03:22,0,150	0/0:12,0:9:1.26:0,1,28	1/1:6,1:6:10.90:70,11,0	0/1:7,4:8:17.32:105,0,17	0/0:13,0:13:8.08:0,8,115	0/1:6,0:6:1.98:2,0,28	0/0:18,0:14:2.49:0,2,87	0/1:14,0:13:3.82:4,0,45	0/0:10,0:10:7.48:0,7,85	0/0:21,0:21:16.71:0,17,206	0/0:9,0:4:5.93:0,6,40	0/1:3,2:5:6.15:88,0,6	0/0:16,0:13:7.16:0,7,53	0/1:7,0:6:0.12:0,0,5	0/1:24,0:23:3.89:4,0,143	0/1:21,0:20:9.04:9,0,105	0/0:13,0:13:17.04:0,17,181	0/1:13,0:8:1.52:2,0,58
chr10	81542818	.	AGAAAGAGAGAGAGAGAGAG	A	6399.14	PASS	AB=0.858;AC=23;AF=0.411;AN=56;BaseQRankSum=4.455;DP=376;FS=19.828;HRun=0;HaplotypeScore=137.4910;InbreedingCoeff=0.0310;MQ=32.32;MQ0=39;MQRankSum=-0.679;QD=28.70;ReadPosRankSum=0.464;VQSLOD=2.7735;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:11:1.34:1,0,397	0/0:13,0:12:23.84:0,24,714	0/0:22,0:2:3.48:0,3,38	0/0:26,0:2:2.04:0,2,6	0/1:13,3:17:36.05:456,0,36	0/1:13,0:12:9.66:10,0,358	0/0:15,0:12:3.43:0,3,230	0/0:16,0:15:34.95:0,35,614	0/0:8,0:3:2.31:0,2,149	1/1:8,6:16:31.90:833,32,0	1/1:12,7:20:36.27:958,36,0	0/0:10,0:8:0.02:0,0,5	0/0:8,0:7:6.22:0,6,458	0/0:12,0:9:7.74:0,8,475	0/1:8,3:12:11.09:437,0,11	1/1:3,4:7:6.27:174,6,0	0/1:15,0:12:18.95:19,0,40	0/1:6,5:11:6.51:168,0,7	0/1:4,1:5:10.44:318,0,10	0/1:10,7:17:32.36:1110,0,32	1/1:4,1:2:3.01:119,3,0	0/1:5,0:5:11.47:12,0,11	0/0:17,0:14:5.78:0,6,243	0/0:3,0:3:3.01:0,3,207	0/1:13,8:20:25.15:517,0,25	1/1:7,12:20:27.97:1111,28,0	0/1:12,0:13:99:138,0,104	1/1:9,0:4:4.74:16,5,0
chr10	81542821	.	AAGAGAGAGAGAGAGAGAGAG	A	6222.50	PASS	AC=24;AF=0.522;AN=46;BaseQRankSum=5.653;DP=378;FS=13.150;HRun=0;HaplotypeScore=143.4181;InbreedingCoeff=0.6574;MQ=32.70;MQ0=36;MQRankSum=-2.240;QD=38.17;ReadPosRankSum=2.514;VQSLOD=3.2263;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:15:9.03:0,9,671	0/0:7,0:9:15.01:0,15,674	0/0:22,0:2:0.89:0,1,2	./.	1/1:17,0:17:9.03:446,9,0	0/0:12,0:11:9.03:0,9,431	0/0:14,0:12:3.01:0,3,255	0/0:21,0:18:24.55:0,25,1100	0/0:10,0:5:5.05:0,5,159	1/1:14,2:15:21.06:840,21,0	1/1:18,1:19:18.06:892,18,0	./.	0/0:9,0:8:9.03:0,9,729	0/0:11,0:9:6.02:0,6,511	1/1:11,1:12:9.03:469,9,0	1/1:7,0:7:3.01:155,3,0	./.	1/1:11,0:11:3.01:157,3,0	1/1:5,1:5:5.63:309,6,0	1/1:15,0:15:21.07:1053,21,0	1/1:5,0:2:3.01:137,3,0	./.	0/0:19,0:16:6.02:0,6,477	0/0:3,0:4:3.01:0,3,228	1/1:21,0:20:9.03:466,9,0	1/1:21,0:20:33.06:1148,33,0	1/1:10,3:13:3.01:150,3,0	./.
chr10	81543131	.	AT	A	19747.06	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=10.896;DP=661;FS=0.479;HRun=3;HaplotypeScore=105.6673;InbreedingCoeff=0.9996;MQ=79.44;MQ0=0;MQRankSum=-5.547;QD=33.58;ReadPosRankSum=6.918;VQSLOD=4.0101;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:84.27:1089,84,0	0/0:11,0:11:27.09:0,27,396	0/0:18,0:18:44.31:0,44,690	0/0:15,0:15:35.13:0,35,489	1/1:0,34:34:93.19:1159,93,0	1/1:0,32:32:75.24:973,75,0	1/1:0,17:17:33.11:428,33,0	0/0:29,0:29:87.28:0,87,1267	1/1:2,20:22:60.19:773,60,0	1/1:0,28:28:78.22:983,78,0	1/1:1,32:33:90.03:1081,90,0	1/1:0,23:23:63.20:818,63,0	1/1:0,30:30:81.13:1051,81,0	1/1:0,18:18:48.16:623,48,0	1/1:0,21:21:57.19:740,57,0	1/1:1,26:27:54.18:701,54,0	1/1:1,19:20:54.18:701,54,0	1/1:0,19:19:57.19:739,57,0	1/1:1,20:21:56.81:666,57,0	1/1:0,20:20:57.18:728,57,0	1/1:1,25:26:63.20:818,63,0	1/1:1,18:19:54.13:681,54,0	1/1:0,20:19:36.12:466,36,0	1/1:0,17:17:51.17:662,51,0	1/1:0,37:37:99:1360,105,0	1/1:0,26:26:78.11:914,78,0	1/1:1,26:27:69.22:895,69,0	1/1:0,19:19:54.18:700,54,0
chr10	81544099	.	AT	A	16063.18	PASS	AB=0.966;AC=49;AF=0.875;AN=56;BaseQRankSum=2.005;DP=511;FS=34.045;HRun=1;HaplotypeScore=79.0672;InbreedingCoeff=0.8285;MQ=84.90;MQ0=0;MQRankSum=-7.353;QD=33.96;ReadPosRankSum=6.139;VQSLOD=2.6615;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:69.23:962,69,0	0/0:5,0:5:15.05:0,15,219	0/0:20,0:20:44.98:0,45,603	0/0:13,0:13:39.07:0,39,489	1/1:0,32:32:87.25:1185,87,0	1/1:0,18:18:51.17:708,51,0	1/1:0,12:12:30.10:419,30,0	0/1:27,1:28:26.17:26,0,121	1/1:0,18:18:39.13:541,39,0	1/1:0,19:19:57.07:715,57,0	1/1:0,17:17:51.08:666,51,0	1/1:0,15:15:36.12:502,36,0	1/1:0,15:15:36.12:497,36,0	1/1:0,19:19:51.17:712,51,0	1/1:0,15:15:39.13:544,39,0	1/1:0,17:17:45.15:628,45,0	1/1:0,19:19:39.13:542,39,0	1/1:0,24:24:69.23:961,69,0	1/1:0,24:24:72.17:948,72,0	1/1:0,26:26:78.12:1004,78,0	1/1:0,7:7:18.06:251,18,0	1/1:0,15:15:35.99:436,36,0	1/1:0,16:16:36.07:476,36,0	1/1:0,18:18:39.13:539,39,0	1/1:0,21:21:57.19:795,57,0	1/1:0,19:18:54.15:712,54,0	1/1:0,24:24:69.23:959,69,0	1/1:0,8:8:24.08:335,24,0
chr10	81544327	.	TACACACACACACACCCACAC	T	386.71	PASS	AB=0.839;AC=13;AF=0.241;AN=54;BaseQRankSum=3.962;DP=506;FS=1.438;HRun=0;HaplotypeScore=203.4155;InbreedingCoeff=0.4553;MQ=62.35;MQ0=12;MQRankSum=-2.357;QD=2.58;ReadPosRankSum=-1.386;VQSLOD=2.6482;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:10,0:10:22.09:0,22,1539	0/0:28,0:10:9.03:0,9,307	0/0:32,0:23:34.44:0,34,1330	0/0:22,0:22:2.99:0,3,52	1/1:22,0:23:6.02:106,6,0	0/1:5,11:16:0:0,0,0	0/0:27,0:26:57.18:0,57,1902	1/1:18,0:17:3.01:69,3,0	0/0:16,0:15:36.10:0,36,1319	0/0:17,0:17:5.91:0,6,184	0/1:15,0:14:14.96:128,0,15	1/1:16,0:16:3.01:138,3,0	1/1:5,10:15:3.01:69,3,0	0/1:17,0:17:0.37:0,0,1	0/0:22,0:21:20.75:0,21,1070	0/0:27,0:27:13.16:0,13,272	0/0:13,0:13:3.01:0,3,104	0/0:16,0:14:21.07:0,21,829	0/0:18,0:18:3.01:0,3,79	0/0:10,0:10:12.04:0,12,581	0/1:4,8:12:0:0,0,0	0/0:20,0:20:5.67:0,6,50	0/1:18,0:16:0:0,0,0	0/0:14,0:14:6.01:0,6,174	0/0:22,0:22:47.83:0,48,1998	0/0:19,0:19:6:0,6,161	0/0:6,0:6:15.05:0,15,598
chr10	81544328	.	ACACACACACACACC	A	612.60	PASS	AB=0.850;AC=13;AF=0.250;AN=52;BaseQRankSum=-1.908;DP=505;FS=4.759;HRun=0;HaplotypeScore=167.9598;InbreedingCoeff=0.3873;MQ=61.22;MQ0=14;MQRankSum=0.973;QD=3.38;ReadPosRankSum=-2.476;VQSLOD=2.3237;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:10,0:10:21.70:0,22,1009	0/1:28,0:10:28.21:28,0,123	0/0:31,0:22:15.56:0,16,588	0/0:22,0:22:0.45:0,0,1	1/1:7,16:23:6.02:211,6,0	0/1:16,0:16:0:0,0,0	0/1:27,0:26:57.26:57,0,758	1/1:5,13:17:3.01:120,3,0	0/0:16,0:15:27.09:0,27,580	0/0:17,0:17:5.91:0,6,86	1/1:3,12:14:6.02:239,6,0	1/1:16,0:16:3.01:82,3,0	0/0:16,0:15:0:0,0,0	0/0:17,0:17:0.39:0,0,1	0/0:24,0:22:22.48:0,22,483	0/0:26,0:26:8.35:0,8,107	0/0:13,0:13:3.01:0,3,44	0/0:14,0:12:20.99:0,21,362	0/0:18,0:18:3:0,3,27	0/0:10,0:10:12.04:0,12,275	./.	0/1:7,13:20:0:0,0,0	0/1:8,10:16:0:0,0,0	0/0:15,0:15:3.01:0,3,72	0/0:23,0:23:46.50:0,46,904	0/0:19,0:19:3.01:0,3,64	0/0:6,0:6:15.04:0,15,231
chr10	81544337	.	CACACCCACACACACACACACAGAGAG	C	355.72	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=3.032;DP=475;FS=0.000;HRun=0;HaplotypeScore=200.2727;InbreedingCoeff=0.4277;MQ=52.39;MQ0=25;MQRankSum=-2.610;QD=2.92;ReadPosRankSum=-1.132;VQSLOD=2.5471;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:8:1.82:0,2,5	0/0:10,0:10:22.56:0,23,1565	0/0:21,0:3:9.03:0,9,307	0/0:23,0:14:34.44:0,34,1332	0/0:24,0:24:2.99:0,3,52	1/1:20,0:19:6.02:106,6,0	0/1:14,0:14:0:0,0,0	0/0:32,0:31:79.83:0,80,2250	1/1:15,0:14:3:29,3,0	0/0:17,0:14:38.84:0,39,1341	0/0:19,0:19:5.91:0,6,184	0/1:15,0:13:15.03:77,0,15	1/1:6,13:17:3.01:197,3,0	1/1:15,0:14:3.01:69,3,0	0/0:19,0:19:0.21:0,0,1	0/0:19,0:17:3.42:0,3,1117	0/0:27,0:27:13.18:0,13,296	0/0:14,0:13:3.01:0,3,104	0/0:10,0:8:24.08:0,24,944	0/0:18,0:17:3.01:0,3,79	0/0:9,0:9:12.04:0,12,589	0/1:11,0:10:0:0,0,0	0/0:19,0:17:5.64:0,6,50	0/1:13,0:12:0:0,0,0	0/0:14,0:14:6.01:0,6,174	0/0:24,0:24:55.48:0,55,2131	0/0:18,0:18:6:0,6,161	0/0:7,0:7:17.75:0,18,628
chr10	81544338	.	ACACC	A	3585.96	PASS	AB=0.922;AC=42;AF=0.778;AN=54;BaseQRankSum=-3.544;DP=455;FS=0.000;HRun=0;HaplotypeScore=101.4375;InbreedingCoeff=0.2657;MQ=52.74;MQ0=25;MQRankSum=2.612;QD=8.83;ReadPosRankSum=-0.525;VQSLOD=2.0585;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:9:0.89:0,1,2	0/0:10,0:10:21.30:0,21,165	0/1:20,0:3:8.98:28,0,9	0/1:23,0:14:6.10:160,0,6	1/1:0,23:23:3.01:48,3,0	1/1:19,0:18:5.95:50,6,0	0/1:11,0:11:0:0,0,0	1/1:31,0:30:76.41:535,76,0	1/1:16,0:15:5.99:55,6,0	1/1:6,11:14:29.35:390,29,0	0/1:2,16:18:3.07:44,0,3	1/1:15,0:13:6.02:65,6,0	1/1:15,0:13:2.84:14,3,0	1/1:11,0:11:2.90:16,3,0	0/0:0,19:19:0.78:0,1,2	1/1:18,1:17:24.10:441,24,0	1/1:25,0:25:8.94:124,9,0	1/1:14,0:13:3.01:54,3,0	1/1:4,6:8:20.96:275,21,0	1/1:1,17:17:3.01:53,3,0	1/1:8,0:8:12.03:193,12,0	./.	0/1:17,0:15:0:0,0,0	0/1:13,0:12:0:0,0,0	1/1:14,0:14:3.01:57,3,0	1/1:1,22:23:53.72:701,54,0	1/1:18,0:18:2.80:56,3,0	1/1:7,0:7:14.96:226,15,0
chr10	81544357	.	CAGAGAG	C	655.26	PASS	AB=1.000;AC=25;AF=0.658;AN=38;BaseQRankSum=1.425;DP=452;FS=7.458;HRun=0;HaplotypeScore=124.1452;InbreedingCoeff=0.2511;MQ=46.05;MQ0=30;MQRankSum=1.918;QD=2.98;ReadPosRankSum=3.514;VQSLOD=1.8815;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:10,0:10:0.11:0,0,0	./.	./.	./.	0/0:22,0:21:0:0,0,0	./.	0/0:31,0:30:3.11:0,3,8	1/1:14,0:15:2.98:21,3,0	0/1:19,0:14:69.83:105,0,70	./.	0/0:15,0:13:3.01:0,3,73	1/1:16,0:13:3.01:44,3,0	1/1:14,0:15:6.02:104,6,0	0/0:19,0:19:3.01:0,3,43	1/1:16,7:21:2.07:17,2,0	1/1:23,0:24:6.89:147,7,0	1/1:12,0:11:3.01:47,3,0	1/1:10,0:9:2.90:20,3,0	./.	1/1:11,0:9:5.81:62,6,0	1/1:14,0:13:2.86:56,3,0	./.	0/1:17,0:16:0:0,0,0	./.	1/1:21,0:21:2.49:104,2,0	0/0:16,0:16:5.98:0,6,48	1/1:10,0:10:0.32:34,0,0
chr10	81544983	.	A	AT	2466.17	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.065;DP=468;FS=3.641;HRun=6;HaplotypeScore=48.2250;InbreedingCoeff=0.9942;MQ=88.96;MQ0=0;MQRankSum=-1.160;QD=32.03;ReadPosRankSum=-1.214;VQSLOD=3.6309;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:51.11:0,51,520	0/0:5,0:5:15.03:0,15,153	0/0:13,0:14:33.51:0,34,308	0/0:21,0:21:51.04:0,51,495	0/0:17,0:17:51.12:0,51,520	0/0:14,0:14:39.09:0,39,398	1/1:0,14:14:42.13:528,42,0	1/1:2,24:26:72.23:905,72,0	0/0:17,0:17:45.10:0,45,459	0/0:25,0:25:69.15:0,69,704	0/0:19,0:19:48.11:0,48,490	0/0:10,0:10:30.07:0,30,306	1/1:1,14:15:39.12:491,39,0	1/1:2,11:13:33.11:415,33,0	0/0:17,0:17:48.11:0,48,489	0/0:18,0:18:54.12:0,54,551	0/0:27,0:27:75.15:0,75,757	0/0:13,0:13:33.07:0,33,336	0/0:15,0:15:45.10:0,45,459	0/0:10,0:10:27.06:0,27,275	0/0:11,0:11:33.08:0,33,337	1/1:1,8:9:24.08:302,24,0	0/0:18,0:18:45.10:0,45,459	0/0:22,0:22:60.08:0,60,594	0/0:18,0:18:54.12:0,54,551	0/0:17,0:16:51.12:0,51,520	0/0:32,0:32:90.18:0,90,911	0/0:10,0:10:21.05:0,21,214
chr10	81545114	.	A	AT	12782.75	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-12.175;DP=522;FS=2.559;HRun=7;HaplotypeScore=56.2420;InbreedingCoeff=0.9937;MQ=70.91;MQ0=0;MQRankSum=-2.443;QD=31.03;ReadPosRankSum=0.895;VQSLOD=5.0906;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:54.08:633,54,0	0/0:7,0:7:18.01:0,18,168	0/0:15,0:13:19.96:0,20,233	0/0:10,0:9:14.35:0,14,124	1/1:5,18:23:69.20:819,69,0	0/0:18,0:17:45.07:0,45,434	1/1:0,10:10:30.09:362,30,0	1/1:5,24:29:69.13:803,69,0	0/0:14,0:14:36.05:0,36,347	1/1:5,21:26:69.19:811,69,0	1/1:6,11:17:44.16:509,44,0	0/0:17,0:17:48.07:0,48,459	1/1:1,18:19:39.12:471,39,0	1/1:3,18:21:48.15:580,48,0	1/1:1,15:16:39.12:471,39,0	1/1:4,19:23:63.18:751,63,0	1/1:4,13:17:42.13:507,42,0	1/1:4,10:14:30.09:362,30,0	1/1:3,24:27:78.20:900,78,0	1/1:2,20:22:66.19:783,66,0	1/1:1,15:16:45.14:543,45,0	1/1:0,8:8:21.06:254,21,0	0/0:16,0:16:42.05:0,42,400	0/0:13,0:13:39.06:0,39,376	1/1:3,22:25:69.20:824,69,0	1/1:4,26:30:81.23:957,81,0	1/1:6,29:34:84.26:1015,84,0	1/1:2,11:13:37.65:427,38,0
chr10	81545199	.	TC	T	7415.19	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=13.357;DP=587;FS=14.152;HRun=7;HaplotypeScore=64.9476;InbreedingCoeff=0.9972;MQ=78.35;MQ0=0;MQRankSum=-1.540;QD=26.29;ReadPosRankSum=2.154;VQSLOD=4.3736;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1245	0/0:11,0:11:30.10:0,30,377	0/0:15,0:15:33.07:0,33,394	0/0:24,1:26:22.91:0,23,638	1/1:1,24:25:66.15:672,66,0	0/0:24,0:24:66.19:0,66,805	0/0:17,0:17:51.16:0,51,642	0/0:21,0:21:57.18:0,57,717	0/0:15,0:15:45.13:0,45,544	1/1:5,17:22:51.11:520,51,0	1/1:4,18:22:48.11:489,48,0	0/0:16,0:16:48.15:0,48,604	0/0:24,0:24:66.21:0,66,830	0/0:29,0:29:75.23:0,75,932	1/1:3,11:14:33.07:337,33,0	1/1:0,19:19:51.12:520,51,0	1/1:3,23:26:66.14:673,66,0	1/1:1,30:31:87.17:878,87,0	1/1:4,8:12:27.05:276,27,0	1/1:1,28:29:81.18:826,81,0	1/1:2,20:22:60.13:612,60,0	0/0:15,0:15:39.12:0,39,491	0/0:23,0:23:60.19:0,60,754	0/0:35,0:35:99:0,102,1234	1/1:1,14:15:42.09:428,42,0	1/1:6,17:23:54.11:551,54,0	1/1:2,15:17:48.07:480,48,0	1/1:1,4:5:15.03:153,15,0
chr10	81545788	.	AC	A	18279.22	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.293;DP=518;FS=3.582;HRun=1;HaplotypeScore=53.9522;InbreedingCoeff=0.9904;MQ=92.53;MQ0=0;MQRankSum=-9.319;QD=38.97;ReadPosRankSum=6.392;VQSLOD=4.8174;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:45.15:629,45,0	0/0:6,0:6:18.03:0,18,234	0/0:24,0:24:68.65:0,69,870	0/0:19,0:19:57.15:0,57,842	1/1:0,28:28:84.20:1131,84,0	1/1:0,25:25:72.24:1007,72,0	1/1:0,14:14:33.11:461,33,0	1/1:0,37:37:99:1520,111,0	1/1:0,18:18:48.16:671,48,0	1/1:0,19:19:57.17:778,57,0	1/1:0,16:16:45.11:607,45,0	1/1:0,20:20:60.20:838,60,0	1/1:0,18:18:45.15:629,45,0	1/1:0,12:12:33.11:461,33,0	1/1:0,23:23:57.19:797,57,0	1/1:0,11:11:33.11:461,33,0	1/1:0,7:7:15.05:210,15,0	1/1:0,23:23:63.21:880,63,0	1/1:0,20:20:60.18:805,60,0	1/1:0,19:19:57.15:775,57,0	1/1:0,20:20:54.18:755,54,0	1/1:0,17:17:48.16:671,48,0	1/1:0,10:10:24.08:336,24,0	1/1:0,18:18:48.16:671,48,0	1/1:0,15:15:42.14:587,42,0	1/1:0,23:23:69.23:964,69,0	1/1:0,25:25:72.24:1006,72,0	1/1:0,15:15:45.15:629,45,0
chr10	81545935	.	CA	C	10794.17	PASS	AB=0.950;AC=51;AF=0.911;AN=56;BaseQRankSum=3.150;DP=499;FS=0.759;HRun=9;HaplotypeScore=77.1765;InbreedingCoeff=0.7020;MQ=74.04;MQ0=0;MQRankSum=-3.318;QD=22.58;ReadPosRankSum=2.778;VQSLOD=5.6826;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:36.02:329,36,0	0/0:16,0:16:48.13:0,48,545	0/1:18,0:18:18.84:19,0,154	0/0:5,0:3:5.80:0,6,42	1/1:2,24:26:72.04:659,72,0	1/1:2,26:28:66.03:604,66,0	1/1:0,12:12:33.02:302,33,0	1/1:1,24:25:72.04:659,72,0	1/1:2,10:12:30.02:275,30,0	1/1:2,16:18:51.01:461,51,0	1/1:3,22:25:63.03:577,63,0	1/1:2,21:23:22.41:460,22,0	1/1:0,12:12:36.02:329,36,0	1/1:1,6:7:18.01:165,18,0	1/1:2,9:11:27.01:247,27,0	1/1:2,14:16:39.02:357,39,0	1/1:3,18:21:48.02:439,48,0	1/1:1,9:10:24.01:220,24,0	1/1:3,7:10:21.01:192,21,0	1/1:2,28:30:78.03:714,78,0	1/1:0,4:4:9:82,9,0	1/1:2,18:20:51.02:465,51,0	1/1:2,25:27:75.04:686,75,0	1/1:0,15:15:39.02:357,39,0	1/1:0,32:32:87.05:796,87,0	1/1:3,19:22:57.03:522,57,0	1/1:5,25:30:69.03:632,69,0	1/1:0,9:9:27.01:247,27,0
chr10	81546038	.	T	TA	2437.51	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-7.171;DP=460;FS=1.051;HRun=3;HaplotypeScore=72.5418;InbreedingCoeff=0.9821;MQ=81.13;MQ0=1;MQRankSum=-3.948;QD=33.39;ReadPosRankSum=-2.114;VQSLOD=3.2427;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:36.11:0,36,432	0/0:7,0:7:18.06:0,18,216	0/0:17,0:17:45.03:0,45,501	0/0:8,0:7:9.03:0,9,107	0/0:31,0:31:84.26:0,84,1006	0/0:25,0:25:69.21:0,69,828	1/1:1,17:18:51.17:714,51,0	1/1:2,20:22:60.18:807,60,0	0/0:9,0:9:21.06:0,21,252	0/0:19,0:19:51.15:0,51,612	0/0:19,0:19:51.16:0,51,612	0/0:13,0:13:39.11:0,39,457	1/1:0,14:14:33.11:461,33,0	1/1:1,8:9:24.08:336,24,0	0/0:18,0:18:54.17:0,54,648	0/0:13,0:13:36.11:0,36,432	0/0:14,0:14:39.07:0,39,440	0/0:11,0:11:33.10:0,33,396	0/0:20,0:20:54.16:0,54,638	0/0:16,0:16:48.15:0,48,576	0/0:13,0:13:39.07:0,39,440	1/1:2,8:10:21.07:294,21,0	0/0:26,0:26:72.21:0,72,853	0/0:14,0:14:39.12:0,39,468	0/0:18,0:18:51.16:0,51,612	0/0:19,0:19:51.14:0,51,601	0/0:31,0:31:93.26:0,93,1092	0/0:14,0:14:39.12:0,39,468
chr10	81547319	.	T	TC	4428.18	PASS	AB=0.600;AC=45;AF=0.804;AN=56;BaseQRankSum=3.914;DP=277;FS=2.003;HRun=0;HaplotypeScore=197.1621;InbreedingCoeff=0.1382;MQ=47.26;MQ0=0;MQRankSum=-0.586;QD=17.23;ReadPosRankSum=1.617;VQSLOD=5.6216;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:26.06:310,26,0	1/1:0,4:4:5.34:97,5,0	0/0:4,0:4:0.79:0,1,3	0/1:5,0:3:3.21:3,0,3	0/0:1,7:8:0.73:0,1,1	0/1:0,8:8:0.78:43,0,1	1/1:0,19:19:27.74:319,28,0	0/1:0,7:7:11.76:12,0,17	1/1:0,14:14:24.47:395,24,0	1/1:0,14:14:24.71:420,25,0	1/1:0,5:5:2.41:39,2,0	1/1:0,11:11:18.03:291,18,0	1/1:0,6:6:7.03:105,7,0	1/1:0,14:14:4.92:200,5,0	1/1:0,11:11:1.92:116,2,0	1/1:0,10:10:21.63:246,22,0	1/1:0,11:11:21.10:275,21,0	1/1:0,9:9:1.03:250,1,0	1/1:1,9:9:4.90:256,5,0	1/1:0,12:12:10.44:144,10,0	1/1:0,11:11:2.47:11,2,0	0/1:0,8:8:0.23:26,0,0	0/1:0,9:9:3.86:40,0,4	0/0:0,8:8:2.92:0,3,17	1/1:0,11:12:0.29:115,0,0	1/1:0,14:14:0.95:287,1,0	1/1:0,18:18:23.49:354,23,0	1/1:0,3:3:6.02:76,6,0
chr10	81547321	.	G	GA	4675.51	PASS	AB=0.600;AC=45;AF=0.804;AN=56;BaseQRankSum=3.344;DP=312;FS=16.150;HRun=1;HaplotypeScore=221.1102;InbreedingCoeff=0.1513;MQ=45.57;MQ0=0;MQRankSum=-3.606;QD=16.41;ReadPosRankSum=3.261;VQSLOD=2.7969;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,12:16:26.06:292,26,0	1/1:1,4:5:5.19:89,5,0	0/1:3,1:4:16.81:36,0,17	0/0:5,0:3:3.71:0,4,19	0/0:2,8:10:1.45:0,1,4	0/1:1,7:8:4.39:34,0,4	1/1:2,19:21:31.39:368,31,0	0/1:4,7:11:12.16:119,0,12	1/1:1,14:15:27.55:394,28,0	1/1:0,14:14:23.96:396,24,0	1/1:0,5:5:2.55:37,3,0	1/1:0,11:11:18.03:272,18,0	1/1:0,6:6:6.07:96,6,0	1/1:0,14:14:4.92:188,5,0	1/1:1,11:12:1.91:111,2,0	1/1:3,10:13:25.24:285,25,0	1/1:0,11:11:20.88:260,21,0	1/1:5,9:14:10.16:361,10,0	1/1:1,10:10:7.91:285,8,0	1/1:0,12:12:13.74:155,14,0	1/1:2,11:13:2.63:11,3,0	0/1:2,8:10:0.23:23,0,0	0/1:0,9:9:3.86:37,0,4	0/0:4,8:12:2.92:0,3,17	1/1:2,11:13:3.25:130,3,0	1/1:1,14:15:3.11:293,3,0	1/1:1,18:19:23.42:333,23,0	1/1:0,3:3:6.01:71,6,0
chr10	81547902	.	ATGCGTGCGTGCGTATG	A	1847.02	PASS	AB=0.857;AC=9;AF=0.161;AN=56;BaseQRankSum=6.050;DP=695;FS=9.804;HRun=0;HaplotypeScore=298.4284;InbreedingCoeff=0.7651;MQ=64.47;MQ0=2;MQRankSum=-5.542;QD=16.95;ReadPosRankSum=-1.111;VQSLOD=0.5202;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:48.14:0,48,2055	0/0:9,0:9:21.07:0,21,872	0/0:33,0:26:12.02:0,12,190	0/0:23,0:18:6.02:0,6,110	0/0:13,0:13:15.04:0,15,579	1/1:6,4:10:9.03:377,9,0	0/0:44,0:44:69.20:0,69,2581	0/0:21,0:21:12.01:0,12,185	1/1:6,14:20:9.03:395,9,0	0/0:23,0:23:21.07:0,21,1261	0/0:10,0:10:12.04:0,12,577	1/1:7,20:27:15.05:643,15,0	0/0:20,0:20:45.14:0,45,2205	0/0:30,0:30:72.25:0,72,3971	0/0:25,0:25:23.77:0,24,1292	0/0:21,0:21:57.18:0,57,3076	0/0:38,0:38:60.19:0,60,2637	0/0:36,0:36:66.23:0,66,2829	0/0:23,0:23:30.09:0,30,1145	0/0:8,0:8:15.05:0,15,813	0/0:84,0:84:99:0,168,8404	0/0:14,0:14:18.06:0,18,683	1/1:7,3:10:12.04:278,12,0	0/1:35,7:42:99:307,0,119	0/0:29,0:29:63.22:0,63,3514	0/0:19,0:19:42.14:0,42,2150	0/0:12,0:12:18.06:0,18,627	0/0:10,0:10:27.09:0,27,1720
chr10	81547997	.	GGTGT	G	1223.64	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=-0.799;DP=586;FS=7.401;HRun=0;HaplotypeScore=137.5746;InbreedingCoeff=0.7439;MQ=54.89;MQ0=10;MQRankSum=-1.955;QD=10.03;ReadPosRankSum=0.197;VQSLOD=2.2186;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:27.07:0,27,472	0/0:7,0:7:3.01:0,3,49	./.	./.	0/0:11,0:11:18.06:0,18,305	1/1:14,12:28:24.03:334,24,0	0/0:20,0:22:14.85:0,15,268	0/0:18,0:18:2.97:0,3,20	1/1:19,2:24:21.04:258,21,0	0/0:18,0:22:28.34:0,28,483	0/0:9,0:10:12.03:0,12,219	1/1:15,6:22:21.05:287,21,0	0/0:8,0:11:6.02:0,6,96	0/0:14,0:20:29.73:0,30,511	0/0:20,0:27:15.05:0,15,299	0/0:10,0:16:18.06:0,18,333	0/0:13,0:25:31.62:0,32,456	0/0:19,0:33:50.81:0,51,820	0/0:18,0:18:9.01:0,9,145	0/0:7,0:8:6:0,6,76	0/0:62,1:74:23.45:0,23,400	0/0:6,0:11:12.04:0,12,229	1/1:6,4:10:9.03:141,9,0	1/1:19,15:38:1.14:358,1,0	0/0:14,0:14:12.04:0,12,229	0/0:15,0:17:33.03:0,33,494	0/0:10,0:16:18.06:0,18,325	0/0:13,0:13:6.02:0,6,105
chr10	81550904	.	GCT	G	1702.17	PASS	AB=0.898;AC=35;AF=0.673;AN=52;BaseQRankSum=-0.328;DP=570;FS=36.326;HRun=0;HaplotypeScore=96.3906;InbreedingCoeff=0.3523;MQ=68.78;MQ0=19;MQRankSum=2.129;QD=4.66;ReadPosRankSum=3.391;VQSLOD=0.8442;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:7.24:0,7,63	0/0:9,0:9:4.25:0,4,29	./.	0/0:42,0:18:0:0,0,0	./.	1/1:9,1:12:16.93:133,17,0	1/1:15,0:15:0.88:2,1,0	0/0:37,0:37:12.49:0,12,66	1/1:10,2:13:14.83:131,15,0	1/1:22,0:25:17.72:74,18,0	1/1:13,0:14:6.63:54,7,0	1/1:19,3:23:23.67:212,24,0	0/0:15,0:25:6.71:0,7,41	0/1:25,0:25:8.08:8,0,126	0/1:22,0:22:26.91:27,0,38	1/1:10,8:18:18.49:190,18,0	1/1:11,0:14:2.84:14,3,0	0/1:7,0:8:8.19:8,0,11	1/1:15,1:15:8.85:75,9,0	1/1:12,5:17:12.03:131,12,0	0/1:20,1:20:27.39:52,0,27	0/0:18,0:18:8.60:0,9,78	1/1:13,0:13:5.04:36,5,0	1/1:17,7:24:25.20:265,25,0	0/1:9,11:20:5.92:116,0,6	1/1:18,2:19:11.82:109,12,0	1/1:15,6:23:5.15:189,5,0	1/1:12,5:17:3.01:33,3,0
chr10	81550991	.	T	TTC	3905.88	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=0.558;DP=614;FS=2.657;HRun=0;HaplotypeScore=112.7991;InbreedingCoeff=0.8792;MQ=75.99;MQ0=11;MQRankSum=-2.183;QD=35.19;ReadPosRankSum=0.495;VQSLOD=5.9202;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:8:18.06:0,18,229	0/0:5,0:5:15.05:0,15,191	0/0:55,0:40:39.26:0,39,432	0/0:75,0:31:16.33:0,16,184	0/0:17,0:17:48.15:0,48,611	1/1:5,16:20:50.74:888,51,0	0/0:17,0:17:33.11:0,33,420	0/0:33,0:33:69.21:0,69,868	1/1:5,16:21:48.16:803,48,0	0/0:29,0:29:55.85:0,56,837	0/0:19,0:19:45.02:0,45,541	1/1:10,12:22:54.15:850,54,0	0/0:16,0:16:36.08:0,36,436	0/0:26,0:26:57.15:0,57,704	0/0:21,0:21:51.16:0,51,649	0/0:19,0:19:51.07:0,51,635	0/0:21,0:21:45.11:0,45,573	0/1:13,0:13:21.84:22,0,235	0/0:18,0:18:44.24:0,44,553	0/0:10,0:10:30.10:0,30,382	0/0:18,0:18:42.12:0,42,521	0/0:8,0:8:21.07:0,21,267	1/1:3,13:16:45.12:671,45,0	1/1:7,11:18:45.10:672,45,0	0/0:22,0:23:54.15:0,54,662	0/0:27,0:27:63.16:0,63,783	0/0:13,0:13:30.08:0,30,367	0/0:22,0:22:54.09:0,54,650
chr10	81551041	.	CTCTCTT	C	4118.29	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.337;DP=695;FS=0.000;HRun=0;HaplotypeScore=160.4361;InbreedingCoeff=0.9982;MQ=67.41;MQ0=9;MQRankSum=-6.478;QD=39.60;ReadPosRankSum=-1.798;VQSLOD=3.1585;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:30.10:0,30,439	0/0:8,0:8:21.07:0,21,701	0/0:59,0:27:62.93:0,63,1050	0/0:99,0:44:55.91:0,56,741	0/0:20,0:20:60.18:0,60,1785	0/0:25,0:24:63.13:0,63,919	1/1:2,13:15:27.09:605,27,0	1/1:5,26:31:80.82:1182,81,0	0/0:17,0:17:45.13:0,45,666	0/0:26,0:26:75.23:0,75,2261	0/0:15,0:15:45.14:0,45,1385	0/0:22,0:22:63.20:0,63,895	1/1:1,15:16:27.03:570,27,0	1/1:2,23:25:45.15:1000,45,0	0/0:26,0:26:78.24:0,78,2386	0/0:26,0:26:69.24:0,69,2339	0/0:23,0:22:51.48:0,51,1815	0/0:13,0:13:29.40:0,29,785	0/0:12,0:12:33.03:0,33,867	0/0:21,0:21:63.19:0,63,1912	0/0:24,0:24:66.13:0,66,1880	1/1:1,16:17:36.12:762,36,0	0/0:20,0:20:57.15:0,57,778	0/0:21,0:21:36.07:0,36,468	0/0:28,0:28:75.26:0,75,2455	0/0:33,0:33:96.31:0,96,3088	0/0:18,0:18:51.11:0,51,1523	0/0:15,0:15:39.10:0,39,1112
chr10	81551047	.	TTC	T	3892.80	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=13.515;DP=697;FS=2.653;HRun=0;HaplotypeScore=114.0946;InbreedingCoeff=0.9942;MQ=65.51;MQ0=11;MQRankSum=-8.026;QD=17.54;ReadPosRankSum=1.572;VQSLOD=3.9074;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:17:30.03:365,30,0	0/0:8,0:8:24.08:0,24,399	0/0:59,0:28:27.17:0,27,443	0/0:97,1:40:13.01:0,13,339	0/0:20,0:20:45.14:0,45,733	1/1:6,18:23:51.13:627,51,0	1/1:14,0:14:22.78:100,23,0	1/1:27,0:27:27.69:115,28,0	1/1:7,10:17:39.10:462,39,0	0/0:25,0:25:66.21:0,66,1069	0/0:16,0:16:39.13:0,39,652	1/1:2,21:23:57.17:717,57,0	1/1:15,0:15:22.01:98,22,0	1/1:23,0:23:38.36:169,38,0	0/0:26,0:26:66.23:0,66,1108	0/0:27,0:27:81.26:0,81,1327	0/0:24,0:23:57.19:0,57,942	0/0:11,0:11:23.11:0,23,360	0/0:13,0:12:27.08:0,27,408	0/0:21,0:21:54.18:0,54,907	0/0:26,0:26:60.17:0,60,938	1/1:16,0:16:27.85:121,28,0	1/1:0,22:22:57.14:713,57,0	1/1:3,20:23:33.06:406,33,0	0/0:29,0:29:84.28:0,84,1377	0/0:36,0:36:63.77:0,64,1553	0/0:18,0:18:51.13:0,51,774	0/0:14,0:14:33.10:0,33,524
chr10	81551173	.	G	GAC	5355.46	PASS	AB=0.993;AC=30;AF=0.536;AN=56;BaseQRankSum=-0.195;DP=686;FS=5.852;HRun=0;HaplotypeScore=127.2195;InbreedingCoeff=0.0522;MQ=59.02;MQ0=21;MQRankSum=1.564;QD=12.72;ReadPosRankSum=-0.142;VQSLOD=4.3835;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,12:21:2.99:0,3,24	0/0:7,0:8:17.89:0,18,190	0/0:78,0:27:14.76:0,15,122	0/0:103,0:36:17.37:0,17,150	1/1:19,0:19:1.28:345,1,0	0/1:17,0:17:10.66:11,0,130	1/1:16,0:16:10.51:119,11,0	1/1:22,0:22:11.92:80,12,0	0/0:15,0:15:0.82:0,1,7	1/1:28,0:28:20.62:515,21,0	1/1:25,0:25:39.65:323,40,0	0/0:11,0:11:1.14:0,1,83	1/1:16,0:15:21.84:241,22,0	1/1:13,0:13:9.32:94,9,0	0/1:16,0:16:35.36:275,0,35	0/1:22,1:24:34.30:269,0,34	0/1:33,0:33:15.26:551,0,15	0/1:19,0:19:3.84:233,0,4	0/1:16,0:15:19.07:139,0,19	1/1:27,0:27:7.57:518,8,0	1/1:27,0:27:47.17:528,47,0	0/1:19,0:19:10.48:60,0,10	0/1:19,1:19:36.46:36,0,213	0/0:29,0:29:9.66:0,10,192	0/1:16,0:16:4.24:325,0,4	0/1:21,0:21:53.09:347,0,53	0/1:16,0:16:2.34:294,0,2	0/1:11,0:11:49.74:53,0,50
chr10	81551194	.	ACT	A	2720.61	PASS	AB=0.959;AC=27;AF=0.482;AN=56;BaseQRankSum=-6.550;DP=678;FS=3.993;HRun=0;HaplotypeScore=128.4697;InbreedingCoeff=-0.2096;MQ=49.65;MQ0=25;MQRankSum=1.634;QD=5.25;ReadPosRankSum=-9.055;VQSLOD=0.3066;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:6.06:98,0,6	0/0:6,0:6:17.22:0,17,219	0/1:68,0:8:18.81:19,0,46	0/0:81,0:13:1.68:0,2,89	0/1:24,0:24:21.91:146,0,22	0/0:24,0:24:20.73:0,21,172	1/1:18,0:18:30.05:226,30,0	0/1:8,14:21:99:232,0,121	0/0:14,0:14:13.94:0,14,131	0/1:28,0:28:4.16:166,0,4	0/1:24,0:24:69.28:82,0,69	0/0:12,0:12:17.95:0,18,130	0/1:14,0:13:12.38:12,0,27	1/1:17,0:17:19.13:112,19,0	0/1:14,1:15:48.42:145,0,48	0/1:21,1:22:82.50:145,0,82	0/1:35,0:35:59.14:211,0,59	0/1:21,1:22:3.31:188,0,3	0/1:18,0:16:8.28:106,0,8	1/1:25,0:25:7.19:259,7,0	1/1:29,0:29:14.36:234,14,0	0/1:21,0:21:11.83:12,0,15	0/0:23,0:22:4.22:0,4,203	0/1:27,0:27:15.88:16,0,225	0/1:20,0:20:77.77:88,0,78	0/1:19,1:20:2.98:208,0,3	1/1:12,0:12:0.91:113,1,0	0/1:8,1:9:13.96:69,0,14
chr10	81551196	.	T	TCACACA	1179.52	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=-3.932;DP=673;FS=9.483;HRun=0;HaplotypeScore=172.1302;InbreedingCoeff=0.4664;MQ=50.09;MQ0=22;MQRankSum=0.048;QD=4.18;ReadPosRankSum=-3.734;VQSLOD=0.5187;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:0.41:1,0,0	0/0:6,0:6:12.03:0,12,211	0/1:66,0:8:0:0,0,0	0/0:78,0:11:5.16:0,5,38	0/0:24,0:24:26.12:0,26,256	1/1:14,9:26:9.03:206,9,0	0/1:16,0:17:2.01:57,0,2	0/0:22,0:21:11.48:0,11,163	1/1:5,7:14:12.04:332,12,0	0/0:26,0:27:34.60:0,35,418	0/0:25,0:25:40.20:0,40,488	1/1:5,6:13:3.01:98,3,0	0/1:14,0:14:17.70:18,0,79	0/1:17,0:17:21.30:21,0,24	0/0:13,0:14:22.49:0,22,284	0/0:22,0:23:26.21:0,26,395	0/0:32,0:34:7.11:0,7,471	0/1:20,0:21:1.39:1,0,196	0/1:16,0:15:26.90:27,0,145	0/0:25,0:26:20.77:0,21,265	0/0:29,0:29:27.82:0,28,279	0/0:21,0:21:4.05:0,4,48	1/1:23,0:22:11.43:239,11,0	1/1:30,0:30:23.27:344,23,0	0/0:22,0:22:9.10:0,9,279	0/0:18,0:19:13.59:0,14,230	0/0:11,0:12:17.89:0,18,233	0/0:7,0:9:26.24:0,26,320
chr10	81551198	.	A	ACT	1719.78	PASS	AB=0.977;AC=26;AF=0.464;AN=56;BaseQRankSum=1.887;DP=670;FS=0.422;HRun=0;HaplotypeScore=133.3756;InbreedingCoeff=-0.2722;MQ=50.23;MQ0=19;MQRankSum=3.826;QD=3.76;ReadPosRankSum=1.557;VQSLOD=2.7959;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:14.93:0,15,116	0/0:6,0:6:18.03:0,18,228	0/0:66,0:9:20.90:0,21,179	0/0:73,0:11:29.40:0,29,252	0/1:24,0:24:29:35,0,29	0/0:25,0:25:2.75:0,3,83	1/1:17,0:17:0.15:216,0,0	0/1:22,0:21:99:195,0,135	0/1:13,0:13:5.71:16,0,6	0/1:27,0:27:38.79:97,0,39	0/1:25,0:25:6.99:48,0,7	0/1:12,0:12:10.70:11,0,16	1/1:6,10:16:15.12:338,15,0	1/1:13,5:18:34.29:323,34,0	0/1:15,0:15:1.94:2,0,56	0/1:23,0:23:74.24:74,0,76	0/1:34,0:34:59.01:59,0,77	0/1:23,0:23:18.36:18,0,132	0/1:15,0:14:31.08:93,0,31	0/1:28,0:28:41.86:67,0,42	1/1:31,0:31:4.31:76,4,0	0/1:6,15:21:14.01:109,0,14	0/0:22,0:21:1.54:0,2,166	0/1:30,0:30:0.80:1,0,161	0/1:22,0:22:30.73:72,0,31	0/1:20,0:20:7.21:7,0,112	0/1:11,0:11:7.52:16,0,8	0/1:9,0:9:4.90:5,0,35
chr10	81551595	.	GA	G	16767.09	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-3.196;DP=730;FS=7.963;HRun=7;HaplotypeScore=109.1778;InbreedingCoeff=0.9969;MQ=87.02;MQ0=2;MQRankSum=-8.446;QD=25.84;ReadPosRankSum=6.350;VQSLOD=3.9728;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:51.11:520,51,0	0/0:10,0:10:30.10:0,30,377	0/0:39,0:36:63.25:0,63,654	0/0:32,0:29:68.16:0,68,680	1/1:5,19:23:54.07:539,54,0	1/1:0,32:32:84.19:856,84,0	1/1:1,21:22:48.11:490,48,0	1/1:2,30:32:87.01:846,87,0	1/1:0,25:25:69.16:704,69,0	1/1:1,29:30:87.19:881,87,0	1/1:7,31:39:86.22:862,86,0	1/1:3,28:31:78.17:795,78,0	1/1:2,25:27:63.14:642,63,0	1/1:1,27:28:78.18:795,78,0	1/1:2,27:29:72.16:734,72,0	1/1:4,28:32:81.18:826,81,0	1/1:1,23:24:57.13:581,57,0	1/1:0,7:7:18.04:184,18,0	1/1:1,14:15:42.07:420,42,0	1/1:1,26:27:78.11:782,78,0	1/1:2,28:30:75.17:765,75,0	1/1:3,22:25:66.15:673,66,0	1/1:4,23:27:65.82:672,66,0	1/1:1,17:18:48.11:489,48,0	1/1:2,31:33:81.18:826,81,0	1/1:2,22:24:66.12:660,66,0	1/1:1,32:33:81.18:826,81,0	1/1:0,13:13:39.09:398,39,0
chr10	81554342	.	AACACACACAC	A	1939.91	PASS	AB=0.917;AC=24;AF=0.500;AN=48;BaseQRankSum=1.653;DP=457;FS=0.977;HRun=0;HaplotypeScore=130.1174;InbreedingCoeff=0.5981;MQ=42.86;MQ0=20;MQRankSum=-2.637;QD=9.42;ReadPosRankSum=-0.105;VQSLOD=2.4210;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:16:2.99:0,3,24	0/0:7,0:7:3.01:0,3,121	./.	./.	1/1:19,3:22:8.98:142,9,0	0/1:12,0:14:18.21:18,0,59	0/0:14,0:13:12.04:0,12,178	0/0:19,0:16:4.21:0,4,22	0/0:9,0:6:9.03:0,9,127	1/1:21,1:20:6.48:109,6,0	1/1:18,0:18:2.03:6,2,0	0/0:11,0:15:19.82:0,20,168	0/0:10,0:12:11.51:0,12,85	0/0:9,0:12:14.22:0,14,128	1/1:12,6:18:24.08:643,24,0	1/1:10,2:12:6.02:159,6,0	./.	1/1:8,1:9:6.02:131,6,0	1/1:15,0:14:3.01:70,3,0	1/1:12,2:15:9.03:247,9,0	./.	0/0:13,0:15:11.63:0,12,147	0/0:10,0:11:8.62:0,9,103	0/0:27,0:25:5.61:0,6,52	1/1:11,2:13:12.02:204,12,0	1/1:17,0:16:3.48:71,3,0	1/1:21,2:22:14.98:307,15,0	0/1:5,0:5:0:0,0,0
chr10	81554464	.	C	CA	19344.42	PASS	AB=0.733;AC=54;AF=0.964;AN=56;BaseQRankSum=-2.963;DP=505;FS=12.133;HRun=1;HaplotypeScore=147.8714;InbreedingCoeff=-0.0451;MQ=45.86;MQ0=1;MQRankSum=-3.822;QD=38.31;ReadPosRankSum=3.086;VQSLOD=2.7760;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:15:30.04:402,30,0	1/1:2,7:9:24.07:341,24,0	0/1:1,1:2:25.72:37,0,26	0/1:6,2:7:73.22:73,0,98	1/1:5,23:27:69.06:954,69,0	1/1:2,27:29:84.24:1195,84,0	1/1:4,14:18:51.17:760,51,0	1/1:5,32:36:99:1576,108,0	1/1:1,13:13:39.12:562,39,0	1/1:3,21:24:72.24:1053,72,0	1/1:4,19:23:60.19:877,60,0	1/1:4,20:24:69.10:941,69,0	1/1:1,19:20:51.17:761,51,0	1/1:2,15:17:45.15:672,45,0	1/1:3,19:21:54.15:783,54,0	1/1:0,19:19:51.17:762,51,0	1/1:0,14:14:39.09:552,39,0	1/1:2,1:3:3.01:45,3,0	1/1:3,19:21:63.18:907,63,0	1/1:3,15:18:51.16:733,51,0	1/1:0,3:3:2.97:20,3,0	1/1:2,15:17:48.16:715,48,0	1/1:1,15:16:45.11:647,45,0	1/1:2,11:12:24.07:332,24,0	1/1:1,20:21:57.15:826,57,0	1/1:1,27:28:81.27:1211,81,0	1/1:4,29:33:90.23:1293,90,0	1/1:1,6:7:21.07:314,21,0
chr10	81554472	.	GTT	G	16933.42	PASS	AB=1.000;AC=55;AF=0.982;AN=56;BaseQRankSum=-3.008;DP=487;FS=16.362;HRun=5;HaplotypeScore=148.1244;InbreedingCoeff=-0.0298;MQ=46.58;MQ0=2;MQRankSum=-3.824;QD=34.77;ReadPosRankSum=2.260;VQSLOD=3.4269;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,10:13:24.08:335,24,0	1/1:2,7:9:21.07:289,21,0	1/1:1,1:2:1.14:39,1,0	0/1:7,0:6:4.41:34,0,4	1/1:5,22:26:57.19:786,57,0	1/1:4,24:28:72.24:1006,72,0	1/1:1,15:16:48.16:664,48,0	1/1:3,31:34:99:1349,99,0	1/1:1,13:12:36.12:503,36,0	1/1:1,20:21:60.20:824,60,0	1/1:2,18:20:51.17:712,51,0	1/1:1,21:22:63.21:880,63,0	1/1:3,15:18:45.15:621,45,0	1/1:1,15:16:42.14:587,42,0	1/1:2,22:23:54.18:755,54,0	1/1:4,15:19:45.15:628,45,0	1/1:1,11:12:30.10:409,30,0	1/1:1,3:3:9.03:126,9,0	1/1:9,14:22:45.14:628,45,0	1/1:1,15:16:45.15:629,45,0	1/1:2,1:3:3.01:42,3,0	1/1:0,16:16:45.15:619,45,0	1/1:1,20:21:51.17:712,51,0	1/1:1,11:12:21.07:284,21,0	1/1:2,19:21:63.21:880,63,0	1/1:3,24:27:75.25:1048,75,0	1/1:1,35:36:93.31:1292,93,0	1/1:0,6:6:18.06:252,18,0
chr10	81555756	.	CGTGTGTGTGTGTGT	C	1594.65	PASS	AB=0.618;AC=21;AF=0.404;AN=52;BaseQRankSum=3.786;DP=541;FS=10.661;HRun=0;HaplotypeScore=184.7528;InbreedingCoeff=0.6562;MQ=62.99;MQ0=13;MQRankSum=-2.528;QD=7.93;ReadPosRankSum=1.167;VQSLOD=1.9657;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,17:38:8.93:0,9,79	0/0:7,0:7:6.02:0,6,200	0/0:28,0:19:2.48:0,2,9	./.	0/0:16,11:29:2.60:0,3,44	0/0:17,0:17:15.02:0,15,465	0/0:24,0:24:29.12:0,29,1479	0/0:32,0:31:28.44:0,28,738	0/0:7,0:7:15.05:0,15,442	1/1:11,0:12:6.02:197,6,0	./.	0/0:20,0:20:12.03:0,12,451	0/0:7,0:7:12.93:0,13,609	0/0:23,0:23:24.04:0,24,1215	1/1:10,6:16:3.01:117,3,0	1/1:9,7:16:6.02:215,6,0	1/1:22,2:31:14.86:361,15,0	1/1:19,3:21:5.91:132,6,0	1/1:12,0:12:2.65:25,3,0	0/0:6,10:16:0.43:0,0,0	1/1:25,0:22:2.99:24,3,0	0/0:24,0:23:27.09:0,27,1296	0/0:18,0:18:3:0,3,25	0/0:22,0:21:33.07:0,33,1073	0/1:8,13:20:0:0,0,0	1/1:15,5:20:11.69:232,12,0	1/1:3,5:9:3.01:110,3,0	1/1:6,8:13:9.03:349,9,0
chr10	81555802	.	TGTGC	T	1050.99	PASS	AB=1.000;AC=22;AF=0.407;AN=54;BaseQRankSum=3.880;DP=480;FS=2.670;HRun=0;HaplotypeScore=101.7075;InbreedingCoeff=-0.2479;MQ=47.17;MQ0=27;MQRankSum=-0.115;QD=3.42;ReadPosRankSum=1.370;VQSLOD=2.1042;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:42:3.76:0,4,212	0/0:7,0:7:5.79:0,6,38	0/0:3,0:1:2.88:0,3,15	0/1:7,0:2:0:0,0,0	0/1:21,0:21:15.73:16,0,33	1/1:2,16:18:5.97:78,6,0	0/1:23,0:23:60.39:60,0,198	0/1:15,0:14:49.55:82,0,50	1/1:10,0:9:17.77:191,18,0	0/0:22,0:21:45.98:0,46,354	0/1:15,0:15:25.74:26,0,89	0/0:6,12:16:2.85:0,3,25	0/1:8,0:7:32.09:32,0,56	0/1:21,0:21:69.64:70,0,174	0/1:7,0:7:4.81:5,0,8	0/1:12,0:12:24.83:25,0,27	0/1:22,0:21:15.75:16,0,134	0/1:17,0:16:28.82:29,0,79	0/0:11,0:10:21.45:0,21,102	0/0:15,0:14:4.78:0,5,41	0/0:31,0:24:17.42:0,17,107	0/1:18,0:17:99:134,0,108	./.	1/1:25,0:23:44.84:348,45,0	0/1:24,0:22:52.16:52,0,73	0/1:19,0:16:11.39:11,0,96	0/1:9,0:9:21.64:22,0,32	0/1:16,0:14:10.49:10,0,50
chr10	81559962	.	TCA	T	625.37	PASS	AB=0.889;AC=13;AF=0.241;AN=54;BaseQRankSum=-4.462;DP=204;FS=9.080;HRun=0;HaplotypeScore=38.4986;InbreedingCoeff=0.6591;MQ=59.82;MQ0=1;MQRankSum=2.940;QD=14.54;ReadPosRankSum=3.493;VQSLOD=2.1878;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,7:8:21.07:257,21,0	0/0:2,0:2:6.02:0,6,86	0/0:11,0:6:15.05:0,15,221	0/0:16,0:8:9.50:0,10,140	0/0:4,0:4:3.01:0,3,37	1/1:2,6:8:6.02:73,6,0	0/0:1,0:3:6:0,6,53	0/0:8,0:25:58.24:0,58,577	1/1:0,3:3:9.03:110,9,0	0/0:6,0:6:15.05:0,15,243	0/0:5,0:5:9.03:0,9,123	1/1:0,3:3:9.03:110,9,0	0/1:2,1:8:21.65:22,0,107	0/0:2,0:5:12:0,12,109	./.	0/0:12,0:12:33.11:0,33,534	0/0:22,0:22:60.20:0,60,926	0/0:13,0:13:33.11:0,33,535	0/0:2,0:2:6.02:0,6,97	0/0:5,0:5:12.04:0,12,194	0/0:7,0:7:12.04:0,12,195	0/0:1,0:2:6:0,6,52	1/1:2,6:8:12.04:147,12,0	1/1:1,4:5:6.02:73,6,0	0/0:4,0:4:9:0,9,97	0/0:4,0:4:9.03:0,9,136	0/0:6,0:6:12.04:0,12,194	0/0:6,0:6:18.04:0,18,266
chr10	81560050	.	ATGTGTG	A	1677.87	PASS	AC=16;AF=0.471;AN=34;BaseQRankSum=0.171;DP=105;FS=24.028;HRun=0;HaplotypeScore=29.6617;InbreedingCoeff=0.6048;MQ=96.66;MQ0=1;MQRankSum=-4.053;QD=34.96;ReadPosRankSum=4.349;VQSLOD=1.6366;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:12.04:0,12,291	0/0:2,0:2:6.02:0,6,182	0/0:5,0:5:11.83:0,12,262	0/0:9,0:9:23.29:0,23,443	./.	0/0:2,0:2:5.99:0,6,49	./.	1/1:3,14:17:51.17:1012,51,0	0/0:1,0:1:2.99:0,3,23	1/1:0,5:5:12.02:198,12,0	./.	0/0:2,0:2:3:0,3,25	./.	./.	./.	./.	1/1:11,0:11:14.77:343,15,0	1/1:0,6:6:3.01:55,3,0	./.	./.	1/1:1,0:1:3.01:69,3,0	./.	0/0:4,0:4:11.98:0,12,99	0/0:1,0:1:2.99:0,3,24	./.	1/1:0,2:2:3:25,3,0	1/1:0,4:4:3.01:57,3,0	1/1:1,1:1:3.01:54,3,0
chr10	81561066	.	TAC	T	6763.21	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.869;DP=947;FS=5.671;HRun=0;HaplotypeScore=173.6761;InbreedingCoeff=0.9566;MQ=57.87;MQ0=22;MQRankSum=1.375;QD=30.60;ReadPosRankSum=2.656;VQSLOD=6.2697;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,11:42:92.70:1258,93,0	0/0:20,0:20:57.19:0,57,959	0/0:69,0:25:34.74:0,35,608	0/0:58,0:32:10.15:0,10,891	0/0:22,0:22:50.91:0,51,800	1/1:20,2:22:54.16:678,54,0	0/0:30,0:30:81.23:0,81,1291	0/0:28,0:27:63.20:0,63,1042	1/1:39,11:50:99:1514,129,0	0/0:37,0:36:99:0,99,1567	0/0:33,0:33:78.19:0,78,1291	1/1:31,5:36:96.23:1178,96,0	0/0:40,0:40:99:0,105,1732	0/0:49,0:49:99:0,126,2012	0/0:43,0:43:99:0,114,1890	0/0:35,0:35:75.26:0,75,1264	0/0:29,0:29:69.22:0,69,1131	0/0:9,0:8:24.08:0,24,406	0/0:22,1:23:3.14:0,3,598	0/0:39,0:37:99:0,108,1774	0/0:47,0:46:99:0,111,1825	0/0:20,0:20:57.11:0,57,819	1/1:20,6:26:59.96:731,60,0	1/1:37,8:45:99:1404,111,0	0/0:25,0:25:54.02:0,54,890	0/0:33,0:33:87.30:0,87,1473	0/0:23,0:23:54.18:0,54,907	0/0:14,0:12:36.12:0,36,604
chr10	81561084	.	A	AAC	20878.72	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-3.976;DP=921;FS=11.152;HRun=0;HaplotypeScore=127.7195;InbreedingCoeff=0.9959;MQ=59.26;MQ0=17;MQRankSum=-0.309;QD=33.14;ReadPosRankSum=5.680;VQSLOD=6.8614;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:38,5:43:89.18:1383,89,0	0/0:22,0:22:60.19:0,60,743	0/0:64,0:26:32.44:0,32,344	0/0:48,0:30:56.02:0,56,602	1/1:4,18:22:14.31:737,14,0	1/1:19,5:24:69.23:1103,69,0	0/0:34,0:34:93.24:0,93,1104	0/0:32,0:32:63.18:0,63,760	1/1:41,4:45:43.29:1492,43,0	1/1:6,32:37:87.30:1419,87,0	1/1:7,25:33:38.18:1082,38,0	1/1:33,3:36:93.30:1451,93,0	0/0:35,0:35:84.25:0,84,1026	0/0:40,0:40:96.29:0,96,1179	1/1:7,32:40:84.29:1364,84,0	1/1:4,27:33:57.19:935,57,0	1/1:8,21:29:45.15:737,45,0	1/1:3,8:10:23.91:358,24,0	1/1:7,17:24:27.76:803,28,0	1/1:9,36:43:99:1647,102,0	1/1:11,34:44:38.09:1144,38,0	0/0:13,0:13:36.58:0,37,447	1/1:19,3:22:43.70:655,44,0	1/1:45,0:45:93.32:1495,93,0	1/1:3,18:21:45.15:738,45,0	1/1:5,28:33:84.27:1353,84,0	1/1:4,20:24:36.12:591,36,0	1/1:8,9:15:24.08:393,24,0
chr10	81562187	.	T	TCAGCCATTCATTGCTTTATTCT	27236.94	PASS	AB=0.556;AC=53;AF=0.981;AN=54;BaseQRankSum=1.415;DP=239;FS=21.818;HRun=0;HaplotypeScore=419.2633;InbreedingCoeff=-0.0627;MQ=47.12;MQ0=0;MQRankSum=-1.664;QD=113.96;ReadPosRankSum=1.664;VQSLOD=3.9140;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:4.83:128,5,0	1/1:7,0:7:15.05:1149,15,0	0/1:1,1:5:24.10:773,0,24	./.	1/1:16,0:16:15.05:1256,15,0	1/1:13,0:13:18.06:1630,18,0	1/1:5,0:5:12.04:831,12,0	1/1:20,0:20:36.79:1775,37,0	1/1:11,0:11:18.06:1192,18,0	1/1:15,0:15:23.29:1649,23,0	1/1:7,0:7:14.69:678,15,0	1/1:4,0:4:7.58:276,8,0	1/1:5,0:5:12.04:718,12,0	1/1:6,0:6:12.04:838,12,0	1/1:6,0:6:15.05:1162,15,0	1/1:5,0:5:7.27:386,7,0	1/1:3,0:3:3.01:288,3,0	1/1:2,0:2:3.01:42,3,0	1/1:9,0:9:24.08:1623,24,0	1/1:23,0:23:46.97:2508,47,0	1/1:1,0:1:3.01:176,3,0	1/1:17,0:17:37.15:2543,37,0	1/1:6,0:6:16.60:791,17,0	1/1:3,0:3:8.98:265,9,0	1/1:12,0:12:19.88:1426,20,0	1/1:14,0:14:32.12:2043,32,0	1/1:12,0:12:15.01:509,15,0	1/1:6,0:6:8.62:581,9,0
chr10	81563393	.	CATAT	C	769.84	PASS	AB=0.900;AC=19;AF=0.500;AN=38;BaseQRankSum=4.817;DP=215;FS=12.118;HRun=0;HaplotypeScore=69.9594;InbreedingCoeff=0.5547;MQ=56.88;MQ0=3;MQRankSum=-3.855;QD=6.69;ReadPosRankSum=0.969;VQSLOD=0.9502;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:3:28,3,0	0/0:3,0:3:3.01:0,3,73	./.	0/0:9,0:5:0:0,0,0	./.	0/0:7,0:7:11.63:0,12,170	./.	./.	./.	0/0:8,0:8:9.01:0,9,147	./.	0/0:1,0:1:3.01:0,3,48	1/1:23,0:23:20.76:195,21,0	1/1:17,0:17:15.02:140,15,0	1/1:5,1:7:12.04:152,12,0	1/1:7,0:7:2.99:24,3,0	0/0:11,0:11:19.31:0,19,215	0/0:10,0:9:15.49:0,15,165	0/1:8,0:9:29.27:43,0,29	./.	./.	1/1:15,0:15:6:53,6,0	0/0:1,0:1:3.01:0,3,46	./.	0/0:4,0:4:6.02:0,6,117	1/1:3,1:4:3:26,3,0	1/1:9,2:11:8.06:86,8,0	1/1:8,1:8:14.53:165,15,0
chr10	81563395	.	TATATATATATATATATATATATATATACAC	T	3674.21	PASS	AB=1.000;AC=11;AF=0.239;AN=46;BaseQRankSum=2.431;DP=208;FS=3.835;HRun=0;HaplotypeScore=150.8099;InbreedingCoeff=0.5363;MQ=56.79;MQ0=3;MQRankSum=-2.657;QD=40.38;ReadPosRankSum=1.877;VQSLOD=2.7798;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:2.93:209,3,0	0/0:3,0:3:3.01:0,3,413	./.	0/0:10,0:5:9.50:0,9,129	./.	0/0:7,0:7:15.04:0,15,1380	1/1:9,0:9:6.02:127,6,0	0/1:14,0:14:16.68:72,0,17	0/0:3,0:3:3.01:0,3,94	0/0:7,0:7:9.03:0,9,755	./.	0/0:1,0:1:3.01:0,3,195	1/1:11,14:25:20.53:1628,21,0	1/1:6,10:16:15.05:1140,15,0	0/0:7,0:7:15.05:0,15,948	0/0:5,0:5:6.02:0,6,299	0/0:11,0:11:21.07:0,21,2067	0/0:10,0:9:24.08:0,24,1898	0/0:8,0:8:18.06:0,18,1055	0/0:5,0:5:3:0,3,25	./.	1/1:6,9:15:9.03:498,9,0	0/0:1,0:1:3.01:0,3,365	./.	0/0:4,0:4:9.03:0,9,839	0/0:4,0:4:3.01:0,3,222	0/0:10,0:10:15.04:0,15,608	0/0:9,0:8:18.06:0,18,1075
chr10	81563408	.	ATATATATATATATACACATATATATATATATGTT	A	2192.63	PASS	AB=1.000;AC=6;AF=0.130;AN=46;BaseQRankSum=5.966;DP=155;FS=0.000;HRun=0;HaplotypeScore=136.6810;InbreedingCoeff=0.3766;MQ=60.86;MQ0=3;MQRankSum=-5.629;QD=43.85;ReadPosRankSum=4.210;VQSLOD=2.2169;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:4:3.01:272,3,0	0/0:3,0:3:6.02:0,6,866	./.	0/0:10,0:6:9.47:0,9,122	./.	0/0:6,0:6:15.05:0,15,1593	0/0:6,0:6:5.67:0,6,34	0/0:6,0:6:17.41:0,17,144	0/0:3,0:3:3.01:0,3,116	0/0:6,0:6:15.52:0,16,1359	./.	0/0:1,0:1:3.01:0,3,200	0/1:20,0:20:1.17:998,0,1	1/1:14,0:14:15.05:773,15,0	0/0:8,0:8:15.05:0,15,1212	0/0:3,0:3:8.77:0,9,390	0/0:10,0:10:21.54:0,22,2312	0/0:10,0:9:24.08:0,24,2075	0/0:6,0:6:18.06:0,18,1209	0/0:1,0:1:3:0,3,25	./.	0/1:12,0:12:77.95:265,0,78	0/0:1,0:1:3.01:0,3,428	./.	0/0:3,0:3:9.03:0,9,970	0/0:3,0:3:9.03:0,9,763	0/0:7,0:7:15.04:0,15,730	0/0:8,0:7:18.06:0,18,1148
chr10	81563417	.	TATATACAC	T	2229.88	PASS	AB=1.000;AC=24;AF=0.632;AN=38;BaseQRankSum=-0.113;DP=134;FS=16.860;HRun=0;HaplotypeScore=62.4123;InbreedingCoeff=0.2623;MQ=55.50;MQ0=4;MQRankSum=-2.960;QD=20.46;ReadPosRankSum=-1.572;VQSLOD=0.8837;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:3.01:56,3,0	0/0:3,0:3:6.02:0,6,202	./.	0/0:7,0:3:0:0,0,0	./.	0/1:4,0:5:3.89:4,0,269	./.	./.	./.	0/1:8,0:8:59.12:117,0,59	./.	./.	1/1:14,0:14:20.67:394,21,0	1/1:11,0:11:15.05:281,15,0	1/1:9,0:9:12.04:276,12,0	1/1:2,1:3:3.01:83,3,0	0/1:9,0:9:22.33:22,0,188	0/1:11,0:10:36.86:37,0,86	1/1:3,3:6:15.05:258,15,0	./.	./.	1/1:9,0:9:6.02:109,6,0	0/0:0,0:2:3.01:0,3,87	0/0:1,0:1:0:0,0,0	0/0:4,0:4:6.02:0,6,128	1/1:5,0:5:12.04:185,12,0	1/1:6,0:7:12.04:234,12,0	1/1:8,0:7:18.06:299,18,0
chr10	81563423	.	CACAT	C	1767.10	PASS	AB=0.838;AC=26;AF=0.619;AN=42;BaseQRankSum=2.111;DP=155;FS=8.551;HRun=0;HaplotypeScore=58.8323;InbreedingCoeff=0.4615;MQ=56.50;MQ0=4;MQRankSum=-1.898;QD=15.78;ReadPosRankSum=2.488;VQSLOD=2.0419;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:3:28,3,0	0/0:3,0:3:9.03:0,9,224	./.	./.	./.	0/1:4,0:4:11.86:12,0,156	0/0:2,0:2:2.99:0,3,23	0/0:12,0:12:29.22:0,29,217	./.	0/1:3,6:9:2.12:191,0,2	./.	0/0:1,0:1:2.98:0,3,21	1/1:14,0:14:20.74:191,21,0	1/1:11,0:11:15.01:136,15,0	1/1:0,10:10:12.04:207,12,0	1/1:1,2:3:3:28,3,0	1/1:8,1:9:19.86:146,20,0	0/1:9,0:8:2.36:67,0,2	1/1:3,2:5:14.96:176,15,0	./.	./.	1/1:9,0:9:5.99:51,6,0	0/0:2,0:2:3.01:0,3,56	0/0:1,0:1:2.98:0,3,22	0/1:2,1:3:0.06:0,0,13	1/1:0,5:5:12.04:195,12,0	1/1:1,6:7:12.04:208,12,0	1/1:9,1:9:23.94:275,24,0
chr10	81563425	.	CAT	C	975.40	PASS	AB=1.000;AC=27;AF=0.614;AN=44;BaseQRankSum=4.601;DP=154;FS=4.919;HRun=0;HaplotypeScore=56.5831;InbreedingCoeff=0.6192;MQ=56.91;MQ0=4;MQRankSum=-1.842;QD=9.38;ReadPosRankSum=3.665;VQSLOD=2.6153;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:2.84:14,3,0	0/0:3,0:3:9.03:0,9,143	./.	./.	./.	0/0:4,0:4:9.01:0,9,91	0/0:4,0:4:6.01:0,6,66	0/0:13,0:13:39.05:0,39,438	0/0:4,0:4:2.99:0,3,24	1/1:7,1:8:11.79:116,12,0	./.	0/0:1,0:1:0:0,0,0	1/1:14,0:14:19.45:93,19,0	1/1:11,0:11:13.99:66,14,0	1/1:10,0:10:12.01:109,12,0	1/1:3,0:3:2.74:12,3,0	1/1:6,4:10:17.78:208,18,0	1/1:5,4:8:5.61:75,6,0	1/1:5,0:5:8.80:73,9,0	./.	./.	1/1:9,0:9:5.42:23,5,0	0/0:2,0:2:2.99:0,3,24	0/0:1,0:1:0:0,0,0	0/1:3,0:3:0.74:1,0,6	1/1:5,0:5:11.86:114,12,0	1/1:7,0:7:12.02:121,12,0	1/1:6,0:5:9.02:95,9,0
chr10	81563853	.	CCT	C	3149.77	PASS	AB=0.529;AC=11;AF=0.196;AN=56;BaseQRankSum=-4.919;DP=509;FS=22.121;HRun=0;HaplotypeScore=85.3857;InbreedingCoeff=0.9017;MQ=81.39;MQ0=1;MQRankSum=2.297;QD=36.20;ReadPosRankSum=1.891;VQSLOD=3.0968;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:45.15:662,45,0	0/0:8,0:8:24.08:0,24,428	0/0:22,0:22:63.07:0,63,1105	0/0:20,0:20:45.15:0,45,819	0/0:23,0:23:62.70:0,63,1067	1/1:0,20:20:54.18:795,54,0	0/0:22,0:22:63.20:0,63,1147	0/0:30,0:30:90.31:0,90,1658	0/1:2,16:18:7.45:573,0,7	0/0:24,0:24:66.22:0,66,1126	0/0:25,0:25:69.24:0,69,1196	1/1:1,12:12:33.11:486,33,0	0/0:19,0:19:57.19:0,57,1032	0/0:13,0:13:39.13:0,39,729	0/0:24,0:24:66.23:0,66,1147	0/0:24,1:25:31.07:0,31,1213	0/0:9,0:9:24.08:0,24,420	0/0:10,0:10:27.09:0,27,473	0/0:20,0:20:57.20:0,57,985	0/0:16,0:16:48.16:0,48,838	0/0:35,0:35:96.33:0,96,1676	0/0:6,0:6:18.06:0,18,337	1/1:1,12:13:33.11:485,33,0	1/1:0,8:8:24.04:328,24,0	0/0:12,0:12:36.07:0,36,571	0/0:20,0:20:60.20:0,60,1028	0/0:28,0:28:72.25:0,72,1263	0/0:11,0:11:33.11:0,33,578
chr10	81567535	.	GT	G	3419.85	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.897;DP=664;FS=0.842;HRun=4;HaplotypeScore=63.8976;InbreedingCoeff=0.9998;MQ=84.10;MQ0=0;MQRankSum=-0.583;QD=33.20;ReadPosRankSum=-0.158;VQSLOD=4.0086;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.19:0,69,944	0/0:13,0:13:36.12:0,36,503	0/0:27,0:27:81.21:0,81,1081	0/0:17,0:17:42.13:0,42,560	0/0:23,0:23:60.19:0,60,823	0/0:33,0:33:96.28:0,96,1321	1/1:0,12:12:30.09:360,30,0	1/1:3,32:35:96.29:1152,96,0	0/0:18,0:18:54.16:0,54,737	0/0:25,0:25:69.22:0,69,951	0/0:30,0:30:90.27:0,90,1239	0/0:19,0:19:57.18:0,57,781	1/1:0,14:14:42.13:504,42,0	1/1:0,15:15:45.14:540,45,0	0/0:20,0:20:60.18:0,60,811	0/0:21,0:21:57.18:0,57,780	0/0:21,0:21:57.19:0,57,797	0/0:18,0:18:51.17:0,51,714	0/0:21,0:21:60.17:0,60,805	0/0:39,0:39:99:0,114,1579	0/0:30,0:30:90.29:0,90,1242	1/1:0,27:27:72.22:864,72,0	0/0:18,0:18:54.18:0,54,756	0/0:28,0:28:84.25:0,84,1138	0/0:20,0:20:57.17:0,57,778	0/0:43,0:43:99:0,126,1716	0/0:34,0:34:96.32:0,96,1334	0/0:18,0:18:51.17:0,51,714
chr10	81568107	.	AACACACACACACAC	A	1696.72	PASS	AB=0.809;AC=16;AF=0.308;AN=52;BaseQRankSum=2.294;DP=507;FS=0.859;HRun=0;HaplotypeScore=177.6229;InbreedingCoeff=0.4433;MQ=54.78;MQ0=17;MQRankSum=-3.083;QD=8.66;ReadPosRankSum=-0.082;VQSLOD=2.2579;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,3:28:81.32:81,0,160	0/0:7,0:7:18.06:0,18,1008	./.	./.	0/0:13,0:20:20.54:0,21,317	0/1:13,8:22:65.56:199,0,66	1/1:23,0:22:6.49:121,6,0	0/0:14,0:12:0:0,0,1	0/1:12,1:15:34.14:300,0,34	0/0:11,0:13:16.27:0,16,256	0/0:7,0:7:9.03:0,9,239	0/1:13,5:16:40.91:108,0,41	1/1:12,0:14:21.01:370,21,0	1/1:7,10:19:14.08:414,14,0	0/0:11,0:15:21.04:0,21,524	0/0:13,0:18:8.86:0,9,58	0/0:14,0:20:17.16:0,17,390	0/0:27,0:27:30.05:0,30,677	0/0:8,0:8:9.03:0,9,222	0/0:10,0:17:11.82:0,12,115	0/0:26,0:25:21.05:0,21,527	1/1:6,2:8:5.91:133,6,0	1/1:6,4:9:2.97:20,3,0	1/1:24,12:36:2.86:116,3,0	0/0:13,0:13:18.02:0,18,340	0/0:21,0:21:22.37:0,22,553	0/0:13,0:19:18.02:0,18,329	0/0:4,0:2:3.01:0,3,38
chr10	81568974	.	TA	T	1854.01	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.780;DP=586;FS=7.686;HRun=9;HaplotypeScore=72.2438;InbreedingCoeff=0.9913;MQ=66.88;MQ0=0;MQRankSum=-0.691;QD=21.07;ReadPosRankSum=-2.260;VQSLOD=3.4326;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.20:0,72,820	0/0:8,0:9:26.91:0,27,291	0/0:18,0:15:29.70:0,30,273	0/0:12,0:9:17.08:0,17,177	0/0:37,0:37:99:0,105,1204	0/0:22,0:22:63.18:0,63,719	1/1:3,11:14:33.01:300,33,0	1/1:7,17:24:56.67:497,57,0	0/0:22,0:22:63.17:0,63,718	0/0:19,0:19:42.12:0,42,483	0/0:30,0:30:90.26:0,90,1029	0/0:19,0:19:51.14:0,51,574	1/1:0,21:21:60.03:549,60,0	1/1:2,5:7:18:161,18,0	0/0:26,0:26:69.21:0,69,796	0/0:18,0:18:51.14:0,51,580	0/0:37,0:37:99:0,105,1187	0/0:16,0:15:36.11:0,36,414	0/0:21,0:21:57.15:0,57,642	0/0:39,0:39:99:0,102,1167	0/0:13,0:13:35.97:0,36,396	1/1:3,19:22:57.03:521,57,0	0/0:30,0:30:84.23:0,84,950	0/0:16,1:17:17.67:0,18,457	0/0:23,0:23:63.19:0,63,727	0/0:15,0:15:45.13:0,45,512	0/0:21,0:21:60.15:0,60,666	0/0:6,0:6:18.05:0,18,208
chr10	81569258	.	TC	T	4823.79	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=3.672;DP=575;FS=2.213;HRun=1;HaplotypeScore=75.0140;InbreedingCoeff=0.9979;MQ=87.02;MQ0=0;MQRankSum=-0.689;QD=38.28;ReadPosRankSum=-0.414;VQSLOD=5.2100;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:66.22:923,66,0	0/0:6,0:6:18.06:0,18,287	0/0:16,0:16:48.16:0,48,739	0/0:22,0:22:57.18:0,57,839	0/0:28,0:28:81.28:0,81,1292	0/0:28,0:28:84.29:0,84,1340	1/1:0,13:13:30.10:419,30,0	1/1:0,28:28:84.26:1134,84,0	0/0:14,0:14:42.14:0,42,670	0/0:30,0:29:90.31:0,90,1436	0/0:18,0:18:54.18:0,54,862	0/0:15,0:15:45.11:0,45,649	1/1:0,16:16:45.15:629,45,0	1/1:0,21:21:63.21:880,63,0	0/0:19,0:19:57.18:0,57,886	0/0:24,0:24:72.20:0,72,1093	0/0:15,0:15:45.15:0,45,712	0/0:10,0:10:30.07:0,30,451	0/0:19,0:19:57.18:0,57,870	0/0:38,0:38:99:0,114,1815	0/0:18,0:18:54.17:0,54,837	1/1:0,22:22:60.20:838,60,0	0/0:34,0:34:99:0,102,1602	0/0:14,0:14:42.10:0,42,638	0/0:25,0:25:75.21:0,75,1168	0/0:23,0:23:63.21:0,63,984	0/0:23,0:23:69.24:0,69,1100	0/0:10,0:10:27.09:0,27,431
chr10	81570184	.	AT	A	1743.72	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.131;DP=491;FS=0.000;HRun=6;HaplotypeScore=87.3850;InbreedingCoeff=0.9833;MQ=83.12;MQ0=1;MQRankSum=-4.532;QD=24.22;ReadPosRankSum=-0.320;VQSLOD=2.7627;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.18:0,60,774	0/0:6,0:6:18.06:0,18,237	0/0:23,0:21:60:0,60,722	0/0:23,0:20:41.88:0,42,527	0/0:28,0:28:81.25:0,81,1040	1/1:1,25:26:69.18:748,69,0	0/0:16,0:16:27.05:0,27,335	0/0:35,0:34:96.31:0,96,1251	1/1:2,6:8:18.05:197,18,0	0/0:15,0:15:42.14:0,42,553	0/0:28,0:28:69.21:0,69,894	1/1:1,11:12:27.07:293,27,0	0/0:17,0:17:30.10:0,30,394	0/0:13,0:13:15.04:0,15,183	0/0:19,0:19:48.16:0,48,632	0/0:16,0:16:45.15:0,45,592	0/0:16,0:16:42.10:0,42,516	0/0:5,0:5:12.04:0,12,158	0/0:19,0:19:45.15:0,45,591	0/0:23,0:23:63.16:0,63,805	0/0:14,0:14:36.12:0,36,473	0/0:18,0:18:21.07:0,21,277	1/1:0,14:14:36.09:387,36,0	1/1:2,10:11:27.07:293,27,0	0/0:11,0:11:33.09:0,33,417	0/0:20,0:20:57.18:0,57,737	0/0:22,0:21:60.20:0,60,788	0/0:9,0:9:27.09:0,27,355
chr10	81570198	.	ATTTTGT	A	3665.13	PASS	AC=18;AF=0.333;AN=54;BaseQRankSum=5.122;DP=430;FS=0.541;HRun=0;HaplotypeScore=103.0586;InbreedingCoeff=0.9064;MQ=74.97;MQ0=5;MQRankSum=-0.880;QD=29.56;ReadPosRankSum=0.852;VQSLOD=3.4962;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:48.11:0,48,1093	0/0:9,0:9:24.08:0,24,518	0/0:26,0:21:57.16:0,57,1389	0/0:22,0:17:47.52:0,48,1211	0/0:27,0:27:69.24:0,69,1742	1/1:14,7:21:33.11:725,33,0	1/1:4,7:11:6.02:107,6,0	1/1:3,23:25:66.21:1354,66,0	1/1:6,0:6:18.06:392,18,0	0/0:15,0:15:45.15:0,45,1167	0/0:25,0:25:75.26:0,75,1826	1/1:6,3:7:18.05:340,18,0	1/1:0,13:13:15.05:268,15,0	./.	0/0:16,0:15:45.15:0,45,1184	0/0:14,0:14:42.14:0,42,1085	0/0:11,0:11:33.11:0,33,760	0/0:4,0:4:6.02:0,6,152	0/0:16,0:16:45.14:0,45,1206	0/0:21,0:21:54.18:0,54,1318	0/0:11,0:11:24.08:0,24,576	1/1:1,15:16:4.95:130,5,0	1/1:6,7:13:3.01:69,3,0	1/1:8,1:8:13.86:279,14,0	0/0:12,0:10:30.10:0,30,751	0/0:17,0:17:51.15:0,51,1327	0/0:22,0:21:63.18:0,63,1327	0/0:7,0:6:18.06:0,18,415
chr10	81570795	.	G	GT	3937.97	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=0.069;DP=641;FS=1.960;HRun=9;HaplotypeScore=69.1299;InbreedingCoeff=0.9978;MQ=83.96;MQ0=2;MQRankSum=-0.119;QD=17.42;ReadPosRankSum=0.200;VQSLOD=3.7829;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:82.97:0,83,698	0/0:10,0:10:26.96:0,27,228	0/0:24,0:23:46.79:0,47,394	0/0:19,0:21:41.52:0,42,336	0/0:28,0:28:71.97:0,72,624	1/1:5,24:29:34.11:605,34,0	1/1:5,0:16:25.57:128,26,0	1/1:9,2:33:65.77:376,66,0	1/1:1,21:22:54.15:597,54,0	0/0:43,0:43:99:0,108,935	0/0:25,0:25:59.97:0,60,521	1/1:1,17:19:41.91:432,42,0	1/1:5,2:23:45.79:265,46,0	1/1:1,0:14:31.25:156,31,0	0/0:20,0:20:50.97:0,51,443	0/0:15,0:15:41.96:0,42,358	0/0:21,0:20:59.99:0,60,521	0/0:11,0:11:29.90:0,30,251	0/0:20,0:20:56.93:0,57,481	0/0:26,0:26:68.97:0,69,598	0/0:22,0:22:59.97:0,60,517	1/1:1,1:20:54.28:293,54,0	1/1:6,22:28:16.67:621,17,0	1/1:3,18:21:42.11:464,42,0	0/0:20,0:20:38.97:0,39,336	0/0:35,0:35:89.96:0,90,781	0/0:28,0:28:74.95:0,75,647	0/0:17,0:17:38.98:0,39,338
chr10	81571704	.	A	AT	13733.50	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=4.472;DP=531;FS=6.393;HRun=3;HaplotypeScore=97.5818;InbreedingCoeff=0.8423;MQ=69.10;MQ0=1;MQRankSum=-3.041;QD=27.97;ReadPosRankSum=3.108;VQSLOD=3.9261;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:39.07:0,39,450	0/0:7,0:7:21.02:0,21,225	0/0:18,0:17:38.97:0,39,405	0/1:9,0:9:10.17:10,0,113	1/1:1,32:33:96.23:1227,96,0	1/1:2,24:26:60.20:793,60,0	1/1:0,0:5:14.32:75,14,0	1/1:3,0:29:71.49:384,71,0	1/1:4,16:20:45.15:593,45,0	1/1:1,25:26:73.55:906,74,0	1/1:2,26:28:78.25:1031,78,0	1/1:2,20:22:57.19:753,57,0	1/1:1,0:21:45.45:224,45,0	1/1:0,0:20:48.29:239,48,0	1/1:1,18:19:45.15:598,45,0	1/1:1,16:18:42.13:543,42,0	1/1:2,22:24:48.16:631,48,0	1/1:1,11:12:20.67:349,21,0	1/1:0,11:11:33.08:416,33,0	1/1:0,23:23:66.13:825,66,0	1/1:0,11:11:27.09:357,27,0	1/1:1,2:19:42.74:216,43,0	1/1:3,22:25:48.64:640,49,0	1/1:0,8:8:21.07:278,21,0	1/1:2,20:23:57.18:743,57,0	1/1:0,24:25:75.20:945,75,0	1/1:1,25:26:51.64:677,52,0	1/1:0,8:8:21.07:282,21,0
chr10	81572282	.	ATTTC	A	5517.94	PASS	AB=0.944;AC=27;AF=0.482;AN=56;BaseQRankSum=-3.070;DP=463;FS=2.847;HRun=0;HaplotypeScore=115.6072;InbreedingCoeff=0.8898;MQ=65.93;MQ0=1;MQRankSum=2.898;QD=24.63;ReadPosRankSum=4.536;VQSLOD=4.6746;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.18:0,54,1063	0/0:1,0:1:3.01:0,3,64	0/0:16,0:11:18.06:0,18,360	0/0:22,0:19:39.06:0,39,717	1/1:19,1:20:27.06:394,27,0	0/0:21,0:21:51.12:0,51,779	0/0:17,0:17:42.13:0,42,715	0/0:22,0:22:57.14:0,57,970	0/0:24,0:24:51.14:0,51,730	1/1:21,0:21:47.65:741,48,0	1/1:9,1:10:9.40:93,9,0	0/0:15,0:15:39.13:0,39,571	0/0:14,0:14:38.91:0,39,614	0/0:20,0:19:54.17:0,54,963	1/1:14,0:14:21.07:328,21,0	0/1:16,1:17:46.40:329,0,46	1/1:15,1:16:27.50:351,28,0	1/1:13,0:13:15.05:220,15,0	1/1:5,15:19:45.08:603,45,0	1/1:17,0:17:26.75:364,27,0	1/1:18,0:18:25.33:421,25,0	0/0:13,0:13:24.08:0,24,418	0/0:8,0:8:24.08:0,24,342	0/0:25,0:25:41.73:0,42,593	1/1:11,1:12:18.04:253,18,0	1/1:21,0:21:50.94:830,51,0	1/1:11,1:11:22.62:313,23,0	1/1:13,0:13:18.53:277,19,0
chr10	81572296	.	TTG	T	875.06	PASS	AB=1.000;AC=11;AF=0.212;AN=52;BaseQRankSum=2.337;DP=523;FS=4.488;HRun=0;HaplotypeScore=150.8282;InbreedingCoeff=0.4528;MQ=52.08;MQ0=17;MQRankSum=1.532;QD=5.99;ReadPosRankSum=4.899;VQSLOD=2.8630;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:31:6.33:6,0,397	0/0:3,0:3:6.01:0,6,72	./.	0/0:17,0:12:6.02:0,6,78	0/0:21,0:21:0.89:0,1,2	1/1:14,12:25:17.70:202,18,0	0/0:22,0:21:5.47:0,5,48	0/0:26,0:23:14.85:0,15,114	1/1:17,10:27:4.66:217,5,0	0/0:17,0:15:2.79:0,3,28	0/0:9,0:9:2.54:0,3,25	1/1:9,8:17:21.06:236,21,0	0/0:20,0:21:16.97:0,17,95	0/0:31,0:28:14.60:0,15,81	0/0:20,0:20:0.47:0,0,1	0/0:17,0:16:2.91:0,3,42	0/0:18,0:18:1.85:0,2,23	0/0:14,0:13:2.80:0,3,21	0/0:22,0:21:5.33:0,5,36	0/0:12,0:12:2.98:0,3,22	./.	0/0:14,0:12:2.52:0,3,23	1/1:4,7:11:12.03:135,12,0	1/1:17,14:30:20.87:222,21,0	0/0:10,0:10:0:0,0,1	0/0:28,0:27:11.24:0,11,104	0/0:14,0:12:2.48:0,2,39	0/0:8,0:8:2.99:0,3,24
chr10	81572312	.	GTGTGTGTGTGTGTGTGTGCA	G	2193.84	PASS	AB=0.941;AC=31;AF=0.574;AN=54;BaseQRankSum=-4.417;DP=496;FS=6.990;HRun=0;HaplotypeScore=241.4466;InbreedingCoeff=0.3115;MQ=46.66;MQ0=28;MQRankSum=2.134;QD=6.83;ReadPosRankSum=-1.915;VQSLOD=1.2444;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:28:4.59:0,5,1457	0/0:5,0:5:9.03:0,9,722	./.	0/0:12,0:7:4.96:0,5,19	1/1:19,0:19:3.01:55,3,0	0/0:30,0:28:21.71:0,22,688	1/1:21,0:19:14.63:186,15,0	0/1:24,0:21:89.88:176,0,90	0/1:30,0:31:2.89:3,0,725	1/1:15,0:13:17.97:245,18,0	1/1:7,1:8:4.78:43,5,0	0/0:19,0:19:23.68:0,24,665	0/1:23,0:23:99:151,0,648	0/1:28,0:25:69.79:70,0,306	0/1:19,0:19:0.21:30,0,0	1/1:14,1:14:9.81:189,10,0	1/1:15,0:14:6.96:80,7,0	1/1:13,0:12:3.01:35,3,0	1/1:14,0:14:14.07:161,14,0	1/1:11,0:11:0.89:2,1,0	0/0:17,0:13:6.02:0,6,356	0/1:13,0:11:36.41:36,0,200	0/0:16,0:15:15.52:0,16,547	0/0:36,0:32:16.43:0,16,371	1/1:8,1:9:9.03:171,9,0	0/1:7,17:21:51.68:533,0,52	1/1:11,1:11:6.90:154,7,0	1/1:6,0:6:3.48:47,3,0
chr10	81572330	.	GCA	G	3966.67	PASS	AB=0.831;AC=38;AF=0.731;AN=52;BaseQRankSum=-3.552;DP=494;FS=1.302;HRun=0;HaplotypeScore=152.6262;InbreedingCoeff=0.0382;MQ=44.07;MQ0=30;MQRankSum=1.140;QD=8.80;ReadPosRankSum=-2.606;VQSLOD=2.6570;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:23:36.11:36,0,313	0/0:5,0:5:8.41:0,8,122	./.	0/0:6,1:2:4.96:0,5,19	1/1:1,17:18:3.01:35,3,0	0/1:17,13:28:14.67:15,0,61	1/1:20,3:21:15.03:209,15,0	0/1:16,6:17:99:221,0,182	0/1:20,14:33:25.23:25,0,34	1/1:3,9:10:27.56:393,28,0	1/1:1,15:16:2.93:36,3,0	0/1:20,4:24:50.29:158,0,50	1/1:22,3:25:35.76:437,36,0	0/1:23,3:24:6.53:200,0,7	1/1:0,16:17:4.79:41,5,0	1/1:3,11:12:12.04:140,12,0	1/1:2,15:16:7.27:81,7,0	1/1:3,11:11:6.02:83,6,0	1/1:10,0:10:27.03:343,27,0	./.	0/0:6,13:15:2.84:0,3,17	1/1:10,2:10:9.02:119,9,0	0/1:16,2:17:35.13:65,0,35	0/1:28,9:33:66.21:101,0,66	1/1:8,4:12:18.06:262,18,0	1/1:21,0:18:28.61:548,29,0	1/1:2,9:10:6.02:74,6,0	1/1:11,0:11:24.08:346,24,0
chr10	81572332	.	ATGTGTG	A	459.76	PASS	AB=0.932;AC=10;AF=0.192;AN=52;BaseQRankSum=-0.279;DP=510;FS=1.080;HRun=0;HaplotypeScore=183.2509;InbreedingCoeff=0.0553;MQ=44.15;MQ0=29;MQRankSum=-2.770;QD=3.38;ReadPosRankSum=0.065;VQSLOD=2.5893;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:25:15.03:0,15,305	0/0:5,0:5:9.92:0,10,246	./.	0/0:8,0:3:3.01:0,3,43	0/0:19,0:19:3.01:0,3,45	0/0:30,0:28:9.50:0,10,161	0/0:16,7:21:0:0,0,0	0/1:23,0:18:9.86:56,0,10	0/0:37,0:36:19.41:0,19,307	0/1:13,0:11:28.79:29,0,42	0/0:16,0:16:3:0,3,35	0/0:24,0:24:22.29:0,22,229	0/1:15,9:25:99:363,0,123	0/1:24,4:26:99:102,0,134	0/0:17,0:17:0.89:0,1,2	0/1:15,0:13:11.25:11,0,41	0/0:18,0:17:4.25:0,4,30	./.	0/0:12,0:12:12.42:0,12,126	0/1:9,0:9:0:0,0,0	0/0:19,0:15:6.02:0,6,153	0/0:10,2:10:3.01:0,3,70	0/0:18,0:17:8.96:0,9,99	0/0:37,0:33:4.67:0,5,28	1/1:12,0:12:0.41:7,0,0	0/0:21,0:18:3.95:0,4,10	1/1:11,0:10:1.25:3,1,0	0/0:11,0:11:1.41:0,1,3
chr10	81572346	.	G	GTGTGTA	661.49	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=1.456;DP=493;FS=6.097;HRun=0;HaplotypeScore=170.8840;InbreedingCoeff=0.2308;MQ=44.39;MQ0=29;MQRankSum=-1.238;QD=2.69;ReadPosRankSum=0.257;VQSLOD=2.0874;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:27:35.63:0,36,323	0/0:6,0:6:13.83:0,14,191	0/0:9,0:4:5.97:0,6,46	0/0:17,0:7:17.30:0,17,163	0/0:8,0:8:2.99:0,3,23	0/1:34,0:32:13.49:13,0,191	1/1:28,0:26:13.69:103,14,0	0/1:18,0:16:83.94:84,0,119	0/0:35,0:34:14.69:0,15,228	0/1:16,0:15:8.30:8,0,248	0/0:15,0:15:11.93:0,12,104	0/1:21,0:21:45.94:46,0,118	1/1:19,2:21:17.70:195,18,0	1/1:34,2:34:20.21:274,20,0	0/1:13,0:13:8.41:8,0,56	0/0:10,0:8:9.07:0,9,63	0/0:12,0:11:5.95:0,6,43	0/0:8,0:6:5.87:0,6,36	0/0:14,0:14:36.76:0,37,258	0/0:7,0:7:5.83:0,6,47	0/0:16,0:12:6.02:0,6,101	1/1:14,0:12:4.74:59,5,0	0/0:16,0:15:14.13:0,14,104	0/1:38,0:34:30.35:30,0,115	0/1:7,0:7:6.65:7,0,63	0/0:23,0:20:8.09:0,8,134	0/0:10,0:9:5.01:0,5,28	0/0:10,0:10:23.44:0,23,162
chr10	81572935	.	GA	G	4956.57	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-0.990;DP=578;FS=4.114;HRun=7;HaplotypeScore=84.3451;InbreedingCoeff=0.9965;MQ=69.11;MQ0=3;MQRankSum=0.670;QD=25.16;ReadPosRankSum=1.313;VQSLOD=5.3623;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:42.09:0,42,510	0/0:14,0:14:36.12:0,36,453	0/0:27,1:23:19.12:0,19,428	0/0:17,0:10:21.05:0,21,249	0/0:29,0:29:78.24:0,78,967	1/1:1,23:24:57.13:582,57,0	1/1:1,7:8:18.04:184,18,0	1/1:9,20:28:66.14:673,66,0	1/1:2,14:16:36.08:367,36,0	0/0:33,0:33:90.29:0,90,1130	0/0:31,0:31:81.25:0,81,1008	1/1:2,9:11:24.05:245,24,0	1/1:2,17:19:51.11:520,51,0	1/1:1,22:23:63.14:642,63,0	0/0:9,0:9:27.07:0,27,327	0/0:22,1:23:29.58:0,30,685	0/0:16,0:16:45.12:0,45,550	0/0:20,0:20:48.15:0,48,604	0/0:13,0:13:33.10:0,33,402	0/0:31,0:31:87.23:0,87,1063	0/0:12,0:12:33.11:0,33,415	1/1:2,22:24:66.15:673,66,0	1/1:3,28:30:75.16:765,75,0	1/1:1,11:12:30.07:306,30,0	0/0:25,0:25:66.18:0,66,802	0/0:21,0:21:60.18:0,60,729	0/0:27,0:27:69.22:0,69,867	0/0:18,0:18:51.16:0,51,642
chr10	81573428	.	AG	A	327.92	PASS	AC=12;AF=1.000;AN=12;DP=21;FS=0.000;HRun=1;HaplotypeScore=13.8616;MQ=20.75;MQ0=0;QD=23.42;VQSLOD=3.3863;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	1/1:0,2:1:3.01:42,3,0	1/1:0,6:4:12.04:167,12,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,2:2:6.02:84,6,0	1/1:0,1:1:0.47:1,0,0	./.	1/1:0,2:2:5.98:62,6,0	./.	./.	./.	./.	1/1:0,1:1:3.01:42,3,0	./.
chr10	81575092	.	TAAA	T	4286.93	PASS	AB=0.896;AC=39;AF=0.696;AN=56;BaseQRankSum=2.536;DP=345;FS=34.842;HRun=15;HaplotypeScore=62.7337;InbreedingCoeff=0.7282;MQ=47.27;MQ0=34;MQRankSum=2.029;QD=16.62;ReadPosRankSum=5.980;VQSLOD=1.1573;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:20:45.86:0,46,558	0/0:3,0:3:5.98:0,6,58	0/1:7,0:3:24.52:25,0,57	0/1:6,0:4:10.25:10,0,33	1/1:4,10:14:29.92:320,30,0	1/1:1,0:13:32.36:195,32,0	0/0:7,0:10:17.98:0,18,249	0/0:12,0:19:35.90:0,36,402	1/1:2,0:10:26.44:158,26,0	1/1:6,8:14:29.93:317,30,0	1/1:4,5:8:7.96:128,8,0	1/1:0,0:13:26.49:201,26,0	0/0:6,0:13:26.91:0,27,310	0/0:3,0:8:24.02:0,24,309	1/1:6,9:17:16.34:318,16,0	1/1:4,9:11:29.99:320,30,0	1/1:4,10:12:27:287,27,0	1/1:3,5:6:17.98:186,18,0	0/1:6,4:11:2.08:151,0,2	1/1:3,14:17:38.94:405,39,0	1/1:6,5:8:14.58:128,15,0	0/0:4,0:5:12.03:0,12,156	1/1:2,0:14:28.49:165,28,0	1/1:8,0:8:14.66:88,15,0	1/1:4,9:13:23.57:245,24,0	1/1:4,11:17:35.84:352,36,0	1/1:5,6:9:17.98:202,18,0	1/1:1,2:4:8.96:85,9,0
chr10	81575357	.	G	GA	2386.02	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-6.962;DP=586;FS=7.541;HRun=9;HaplotypeScore=58.2145;InbreedingCoeff=0.9966;MQ=64.58;MQ0=6;MQRankSum=0.309;QD=22.09;ReadPosRankSum=-1.803;VQSLOD=3.7435;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:43:99:0,113,969	0/0:9,0:9:20.99:0,21,182	0/0:10,0:9:26.98:0,27,231	0/0:9,0:10:22.48:0,22,172	0/0:31,0:30:68.95:0,69,595	0/0:21,0:21:56.98:0,57,495	1/1:2,26:27:59.94:663,60,0	1/1:6,18:23:48.10:513,48,0	0/0:32,0:31:65.93:0,66,569	0/0:23,0:23:56.98:0,57,495	0/0:18,0:16:38.98:0,39,338	0/0:19,0:19:44.99:0,45,391	1/1:3,14:17:42.10:456,42,0	1/1:4,19:23:54.15:597,54,0	0/0:29,0:29:74.96:0,75,651	0/0:23,0:23:65.98:0,66,573	0/0:28,0:28:77.98:0,78,677	0/0:10,0:10:26.99:0,27,234	0/0:22,0:22:56.97:0,57,492	0/0:20,0:20:50.96:0,51,439	0/0:21,0:21:53.98:0,54,468	1/1:4,12:16:30.08:332,30,0	0/0:17,0:17:32.97:0,33,286	0/0:19,0:19:21.14:0,21,409	0/0:12,0:12:35.99:0,36,313	0/0:25,0:25:68.02:0,68,579	0/0:25,0:25:65.96:0,66,569	0/0:11,0:10:29.90:0,30,249
chr10	81576519	.	AT	A	18996.82	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=6.663;DP=603;FS=1.045;HRun=2;HaplotypeScore=120.3487;InbreedingCoeff=0.9942;MQ=88.89;MQ0=0;MQRankSum=-8.331;QD=35.31;ReadPosRankSum=6.281;VQSLOD=4.1371;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:24.08:0,24,360	0/0:12,0:12:36.11:0,36,520	0/0:26,0:26:75.08:0,75,1088	0/0:18,0:18:47.73:0,48,609	1/1:0,39:39:96.31:1246,96,0	1/1:0,25:25:72.23:935,72,0	1/1:1,16:17:48.16:623,48,0	1/1:1,25:26:75.23:960,75,0	1/1:0,27:27:78.25:1013,78,0	1/1:0,24:24:72.23:935,72,0	1/1:0,25:25:75.24:968,75,0	1/1:0,19:19:57.19:740,57,0	1/1:0,17:17:36.12:468,36,0	1/1:0,22:22:60.20:779,60,0	1/1:0,22:22:66.21:855,66,0	1/1:0,10:10:30.10:390,30,0	1/1:0,24:24:69.22:884,69,0	1/1:0,9:9:24.08:305,24,0	1/1:3,20:23:60.11:728,60,0	1/1:0,34:34:93.30:1208,93,0	1/1:0,18:18:51.17:662,51,0	1/1:0,23:23:57.18:735,57,0	1/1:1,28:29:78.12:1013,78,0	1/1:0,15:15:45.15:584,45,0	1/1:0,26:26:66.21:857,66,0	1/1:0,24:24:72.19:902,72,0	1/1:1,29:30:78.25:1013,78,0	1/1:0,10:10:15.05:195,15,0
chr10	81576882	.	A	AT	16503.57	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=3.888;DP=579;FS=10.534;HRun=6;HaplotypeScore=102.4073;InbreedingCoeff=0.9947;MQ=84.87;MQ0=0;MQRankSum=-6.970;QD=32.81;ReadPosRankSum=4.521;VQSLOD=3.6207;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.16:0,75,765	0/0:8,0:8:24.04:0,24,238	0/0:23,0:23:48.49:0,48,600	0/0:18,0:18:40.58:0,41,370	1/1:1,19:20:57.10:681,57,0	1/1:2,20:22:57.18:717,57,0	1/1:1,16:17:39.12:491,39,0	1/1:3,24:27:72.23:904,72,0	1/1:0,19:19:48.15:604,48,0	1/1:4,17:21:51.16:642,51,0	1/1:0,16:16:42.13:528,42,0	1/1:4,11:15:36.11:446,36,0	1/1:3,24:27:72.23:904,72,0	1/1:0,22:22:54.17:679,54,0	1/1:1,30:31:84.27:1057,84,0	1/1:1,14:15:42.13:528,42,0	1/1:1,10:11:30.10:377,30,0	1/1:0,7:7:15.05:188,15,0	1/1:4,23:27:69.21:854,69,0	1/1:2,23:25:69.22:868,69,0	1/1:2,21:23:63.67:794,64,0	1/1:1,22:23:63.20:792,63,0	1/1:1,24:25:66.21:830,66,0	1/1:1,19:20:57.18:717,57,0	1/1:2,12:14:36.12:453,36,0	1/1:1,23:24:69.22:865,69,0	1/1:6,31:37:84.27:1057,84,0	1/1:1,14:15:42.13:528,42,0
chr10	81577949	.	AT	A	2273.50	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-3.042;DP=584;FS=7.219;HRun=7;HaplotypeScore=86.2679;InbreedingCoeff=0.9722;MQ=87.66;MQ0=0;MQRankSum=0.426;QD=25.84;ReadPosRankSum=0.841;VQSLOD=4.0693;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.31:0,96,1204	0/0:10,0:10:30.10:0,30,377	0/0:24,0:24:41.94:0,42,444	0/0:27,0:25:5.33:0,5,362	0/0:23,0:23:66.21:0,66,830	1/1:2,17:19:54.12:551,54,0	0/0:15,0:15:42.12:0,42,515	0/0:23,0:23:66.19:0,66,796	1/1:0,16:16:45.10:459,45,0	0/0:18,0:18:39.12:0,39,490	0/0:21,0:21:60.18:0,60,743	1/1:1,10:11:30.07:306,30,0	0/0:17,0:17:45.14:0,45,566	0/0:17,0:17:48.15:0,48,592	0/0:17,0:17:51.16:0,51,642	0/0:14,0:14:42.13:0,42,528	0/0:26,0:26:72.16:0,72,870	0/0:13,0:13:27.05:0,27,321	0/0:29,0:29:81.26:0,81,1019	0/0:28,0:28:81.26:0,81,1019	0/0:12,0:12:30.08:0,30,363	0/0:26,0:26:75.20:0,75,904	1/1:3,20:23:54.03:551,54,0	1/1:0,19:19:57.13:582,57,0	0/0:28,0:28:81.24:0,81,1004	0/0:32,0:32:90.28:0,90,1121	0/0:26,0:25:78.25:0,78,981	0/0:14,0:14:42.13:0,42,528
chr10	81578047	.	T	TG	11336.42	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.437;DP=573;FS=1.253;HRun=6;HaplotypeScore=76.7761;InbreedingCoeff=0.9961;MQ=88.62;MQ0=0;MQRankSum=-7.816;QD=21.80;ReadPosRankSum=4.697;VQSLOD=4.1620;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,36:41:84.27:1057,84,0	0/0:12,0:12:33.07:0,33,337	0/0:20,0:20:54.12:0,54,549	0/0:21,0:21:45.09:0,45,455	1/1:22,0:22:59.65:449,60,0	1/1:1,26:27:72.23:901,72,0	1/1:28,0:28:71.36:504,71,0	1/1:17,0:17:44.13:272,44,0	1/1:2,14:16:39.12:491,39,0	1/1:22,0:22:58.81:390,59,0	1/1:18,0:18:47.72:360,48,0	1/1:2,15:17:45.14:566,45,0	1/1:18,0:18:47.31:332,47,0	1/1:17,0:17:47.62:339,48,0	1/1:24,0:24:65.39:453,65,0	1/1:20,0:20:59.39:404,59,0	1/1:22,0:22:50.60:358,51,0	1/1:11,0:11:23.84:179,24,0	1/1:20,0:19:58.90:371,59,0	1/1:20,0:20:50.58:358,51,0	1/1:21,0:21:50.60:358,51,0	1/1:18,1:19:41.71:319,42,0	1/1:1,15:16:42.13:524,42,0	1/1:3,26:29:75.24:944,75,0	1/1:20,0:19:53.55:388,54,0	1/1:19,0:19:50:322,50,0	1/1:30,0:30:77.42:559,77,0	1/1:6,0:6:17.90:142,18,0
chr10	81578052	.	G	GA	16516.73	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-5.811;DP=573;FS=1.727;HRun=0;HaplotypeScore=60.9648;InbreedingCoeff=0.9833;MQ=89.72;MQ0=0;MQRankSum=-8.052;QD=31.89;ReadPosRankSum=6.243;VQSLOD=4.6803;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:38:32.87:302,33,0	0/0:12,0:12:33.11:0,33,461	0/0:22,0:22:63.17:0,63,829	0/0:21,0:21:53.39:0,53,740	1/1:2,25:27:60.20:916,60,0	1/1:27,0:27:25.26:226,25,0	1/1:0,25:25:72.24:1093,72,0	1/1:0,17:17:51.15:742,51,0	1/1:15,0:15:12.40:121,12,0	1/1:1,22:23:60.20:912,60,0	1/1:0,18:18:51.11:751,51,0	1/1:17,0:17:18.82:144,19,0	1/1:0,19:19:51.16:759,51,0	1/1:0,19:19:48.16:734,48,0	1/1:1,25:26:66.22:1010,66,0	1/1:0,20:20:60.20:919,60,0	1/1:2,19:21:51.17:780,51,0	1/1:0,8:8:24.08:361,24,0	1/1:0,22:21:66.20:970,66,0	1/1:1,19:20:51.17:780,51,0	1/1:0,21:21:51.17:780,51,0	1/1:2,15:17:45.08:653,45,0	1/1:15,0:16:38.59:191,39,0	1/1:28,0:28:67.72:287,68,0	1/1:1,19:19:57.16:846,57,0	1/1:1,18:19:51.17:777,51,0	1/1:0,29:29:78.26:1191,78,0	1/1:0,6:6:18.06:271,18,0
chr10	81578286	.	ACT	A	1341.37	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.960;DP=728;FS=1.344;HRun=0;HaplotypeScore=108.9493;InbreedingCoeff=0.9796;MQ=89.33;MQ0=0;MQRankSum=0.142;QD=34.39;ReadPosRankSum=-3.836;VQSLOD=4.2614;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.19:0,63,1092	0/0:10,0:10:27.08:0,27,465	0/0:32,0:32:87.25:0,87,1400	0/0:22,0:22:56.36:0,56,1037	0/0:30,0:30:87.24:0,87,1471	0/0:24,0:24:63.22:0,63,1144	0/0:30,0:30:87.27:0,87,1525	1/1:2,37:39:99:1436,108,0	0/0:31,0:31:90.29:0,90,1610	0/0:35,0:35:99:0,99,1736	0/0:27,0:27:78.23:0,78,1331	0/0:26,0:26:75.22:0,75,1276	0/0:43,0:43:99:0,120,2186	0/0:23,0:23:69.21:0,69,1196	0/0:32,0:32:93.29:0,93,1639	0/0:26,0:26:75.26:0,75,1368	0/0:21,0:21:60.18:0,60,1067	0/0:5,0:5:15.05:0,15,262	0/0:25,0:25:66.22:0,66,1167	0/0:39,0:39:99:0,117,2082	0/0:20,0:20:60.19:0,60,1068	0/0:25,0:25:75.21:0,75,1282	0/0:21,0:21:63.20:0,63,1117	0/0:21,0:21:63.18:0,63,1084	0/0:31,0:30:93.30:0,93,1645	0/0:31,0:31:90.30:0,90,1596	0/0:29,0:29:87.30:0,87,1588	0/0:7,0:7:20.99:0,21,298
chr10	81580902	.	TGTTCTG	T	368.13	PASS	AB=0.799;AC=5;AF=0.089;AN=56;BaseQRankSum=6.317;DP=622;FS=5.515;HRun=0;HaplotypeScore=153.0993;InbreedingCoeff=0.1336;MQ=91.47;MQ0=0;MQRankSum=-6.529;QD=7.51;ReadPosRankSum=1.776;VQSLOD=2.5039;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:99:0,117,3037	0/0:11,0:11:33.11:0,33,1228	0/0:36,0:36:99:0,108,3629	0/0:23,0:23:66.15:0,66,2032	0/0:26,0:26:75.26:0,75,2694	0/1:9,4:13:25.89:183,0,26	0/0:21,0:21:63.22:0,63,2340	0/0:35,0:35:99:0,102,3538	0/1:9,1:10:57.56:58,0,82	0/0:21,0:21:63.22:0,63,2263	0/0:21,0:21:63.22:0,63,2305	0/1:8,5:13:24.41:127,0,24	0/0:22,0:22:66.21:0,66,2269	0/0:30,0:30:84.29:0,84,3017	0/0:27,0:27:81.28:0,81,3045	0/0:11,0:11:33.11:0,33,1227	0/0:14,0:14:42.13:0,42,1490	0/0:9,0:9:24.07:0,24,814	0/0:24,0:24:72.23:0,72,2548	0/0:30,0:30:90.30:0,90,3298	0/0:52,0:52:99:0,144,5238	0/0:24,0:24:72.25:0,72,2669	1/1:11,2:13:0:110,0,0	0/0:6,1:7:1.15:0,1,15	0/0:16,0:16:48.16:0,48,1715	0/0:36,0:36:99:0,108,4044	0/0:23,0:23:69.24:0,69,2542	0/0:14,0:14:42.14:0,42,1580
chr10	81580909	.	ATAGTAAAAGTTCATTTTCAGATTTTGTCAGATGTACCTCTG	A	3233.06	PASS	AB=0.500;AC=9;AF=0.161;AN=56;BaseQRankSum=6.162;DP=574;FS=2.356;HRun=0;HaplotypeScore=559.5546;InbreedingCoeff=0.8789;MQ=90.89;MQ0=0;MQRankSum=-4.864;QD=215.54;ReadPosRankSum=2.850;VQSLOD=3.3565;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:99:0,108,14537	0/0:12,0:12:36.12:0,36,5350	0/0:31,0:31:90.31:0,90,5318	0/0:21,0:21:60.21:0,60,4317	0/0:24,0:24:72.23:0,72,9660	1/1:0,4:4:12.04:1158,12,0	0/0:21,0:21:63.20:0,63,7121	0/0:31,0:31:90.29:0,90,7088	1/1:0,1:1:3.01:291,3,0	0/0:22,0:22:66.23:0,66,10008	0/0:23,0:23:63.22:0,63,8931	1/1:1,5:6:15.05:1361,15,0	0/0:24,0:24:69.22:0,69,9820	0/0:31,0:31:81.28:0,81,12132	0/0:29,0:29:87.30:0,87,11110	0/0:11,0:11:30.08:0,30,3199	0/0:14,0:14:42.12:0,42,4795	0/0:10,0:10:27.09:0,27,4769	0/0:26,0:26:72.25:0,72,9000	0/0:30,0:30:90.31:0,90,13444	0/0:48,0:48:99:0,144,20428	0/0:25,0:25:75.26:0,75,10686	1/1:1,2:3:9.03:564,9,0	0/1:0,1:1:0:0,0,0	0/0:15,0:15:45.15:0,45,6811	0/0:37,0:37:99:0,111,16745	0/0:23,0:23:69.24:0,69,11343	0/0:14,0:14:42.14:0,42,6120
chr10	81581058	.	TCACACACACACACACA	T	3437.05	PASS	AB=0.790;AC=33;AF=0.660;AN=50;BaseQRankSum=3.721;DP=350;FS=1.264;HRun=0;HaplotypeScore=121.3881;InbreedingCoeff=0.3774;MQ=34.62;MQ0=55;MQRankSum=-3.220;QD=15.14;ReadPosRankSum=0.837;VQSLOD=2.3944;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:16:0.89:2,1,0	0/0:9,0:8:14.13:0,14,895	./.	./.	0/1:9,0:15:0:0,0,0	1/1:8,0:10:3.01:82,3,0	0/0:20,0:14:18.21:0,18,405	0/0:19,0:17:21.04:0,21,413	1/1:6,1:12:12.03:249,12,0	0/1:8,0:8:99:157,0,174	./.	1/1:17,0:17:2.79:82,3,0	0/0:4,0:12:3.48:0,3,56	0/0:10,0:14:3.01:0,3,63	1/1:5,5:8:3.01:129,3,0	1/1:3,3:5:6.02:261,6,0	1/1:5,0:6:3.01:88,3,0	0/1:7,0:6:86.55:286,0,87	1/1:4,5:7:15.03:370,15,0	1/1:10,4:14:3.01:128,3,0	1/1:17,5:15:0.47:1,0,0	1/1:5,0:7:0.89:2,1,0	0/0:7,0:14:3.48:0,3,152	0/0:14,0:8:3.01:0,3,141	1/1:5,1:8:0.47:1,0,0	1/1:12,9:24:37.03:1342,37,0	1/1:3,2:4:2.92:127,3,0	1/1:5,1:4:2.97:130,3,0
chr10	81581839	.	C	CT	9362.27	PASS	AB=0.560;AC=37;AF=0.661;AN=56;BaseQRankSum=-12.262;DP=478;FS=8.407;HRun=8;HaplotypeScore=40.0139;InbreedingCoeff=0.9403;MQ=76.30;MQ0=0;MQRankSum=-2.047;QD=28.03;ReadPosRankSum=-0.615;VQSLOD=4.6543;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66:0,66,594	0/0:12,0:12:36.02:0,36,329	0/0:13,0:13:23.99:0,24,217	0/0:10,0:10:17.51:0,18,187	1/1:3,18:21:54.12:608,54,0	0/0:22,0:22:60.03:0,60,549	1/1:4,7:11:18.05:208,18,0	1/1:6,21:27:66.15:747,66,0	0/0:12,0:12:36.02:0,36,330	1/1:0,22:22:66.18:750,66,0	1/1:3,16:19:42.12:485,42,0	0/0:18,0:18:54:0,54,488	1/1:4,15:19:48.13:543,48,0	0/1:3,11:14:3.40:218,0,3	1/1:2,14:16:33.10:381,33,0	1/1:1,20:21:51.15:589,51,0	1/1:1,13:14:36.11:415,36,0	1/1:6,5:11:18.03:195,18,0	1/1:5,15:20:45.13:519,45,0	1/1:2,15:17:45.13:519,45,0	1/1:0,10:10:24.07:277,24,0	1/1:1,14:15:42.12:485,42,0	0/0:15,0:15:42.02:0,42,384	0/0:17,0:17:45.02:0,45,412	1/1:0,14:14:39.12:450,39,0	1/1:1,24:25:72.21:831,72,0	1/1:1,24:25:63.17:727,63,0	1/1:0,13:13:36.11:415,36,0
chr10	81583363	.	C	CT	1188.36	PASS	AC=12;AF=0.667;AN=18;BaseQRankSum=3.180;DP=58;FS=9.294;HRun=1;HaplotypeScore=63.5815;MQ=25.63;MQ0=4;MQRankSum=-0.027;QD=27.01;ReadPosRankSum=2.646;VQSLOD=2.6704;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,9:11:15.05:214,15,0	./.	./.	0/0:5,0:2:6.02:0,6,78	./.	1/1:0,8:8:24.08:344,24,0	./.	0/0:1,0:1:3.01:0,3,39	1/1:1,5:6:12.04:172,12,0	./.	./.	1/1:0,8:8:18.05:257,18,0	./.	./.	./.	./.	./.	./.	0/0:3,0:1:3.01:0,3,39	./.	./.	./.	1/1:0,4:4:12.04:171,12,0	1/1:1,5:6:9.03:129,9,0	./.	./.	./.	./.
chr10	81585114	.	AT	A	15827.90	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=10.056;DP=589;FS=0.324;HRun=1;HaplotypeScore=70.2103;InbreedingCoeff=0.9967;MQ=94.65;MQ0=0;MQRankSum=-5.858;QD=38.98;ReadPosRankSum=3.791;VQSLOD=5.4593;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.17:0,51,777	0/0:7,0:7:21.04:0,21,297	0/0:34,0:34:99:0,102,1384	0/0:22,0:22:57.63:0,58,782	1/1:0,37:37:99:1413,108,0	0/0:25,0:25:75.24:0,75,1122	1/1:0,11:11:27.09:377,27,0	1/1:0,27:27:81.25:1095,81,0	0/0:25,0:25:75.17:0,75,1117	1/1:0,40:40:99:1639,120,0	1/1:0,25:25:75.25:1040,75,0	0/0:21,0:21:62.56:0,63,902	1/1:0,19:19:48.16:671,48,0	1/1:0,29:29:78.26:1090,78,0	1/1:0,19:19:57.19:797,57,0	1/1:0,15:15:45.15:629,45,0	1/1:0,20:20:60.20:831,60,0	1/1:0,13:13:36.12:502,36,0	1/1:0,12:12:36.12:492,36,0	1/1:0,22:22:63.13:834,63,0	1/1:0,19:19:54.18:749,54,0	1/1:0,21:21:57.10:753,57,0	0/0:19,0:19:57.19:0,57,872	0/0:12,0:12:36.10:0,36,525	1/1:0,25:25:72.24:1006,72,0	1/1:0,17:17:51.16:696,51,0	1/1:0,28:28:72.24:1006,72,0	1/1:0,7:7:15.05:210,15,0
chr10	81588152	.	TGTGTGTGC	T	1478.14	PASS	AB=0.983;AC=14;AF=0.250;AN=56;BaseQRankSum=1.568;DP=750;FS=25.237;HRun=0;HaplotypeScore=208.5227;InbreedingCoeff=-0.1332;MQ=42.12;MQ0=19;MQRankSum=-7.115;QD=4.65;ReadPosRankSum=-2.680;VQSLOD=0.8730;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:26.29:0,26,361	0/0:5,0:5:12.03:0,12,333	0/0:39,0:5:11.91:0,12,159	0/0:53,0:11:27.99:0,28,170	0/0:22,0:22:24.05:0,24,569	0/0:19,1:20:20.14:0,20,186	0/1:30,1:30:32.80:122,0,33	1/1:39,0:36:86.36:840,86,0	0/1:25,2:26:25.04:25,0,266	0/1:25,0:25:99:114,0,596	0/0:18,0:18:21.07:0,21,534	0/0:34,0:34:12.97:0,13,233	0/1:24,1:25:99:224,0,114	0/1:25,2:27:35.56:84,0,36	0/0:29,0:29:42.66:0,43,828	0/0:33,0:32:12.44:0,12,522	0/1:24,0:23:0.21:0,0,657	0/1:22,0:22:26.56:27,0,511	0/1:12,0:12:99:120,0,231	0/1:21,0:20:1.44:1,0,346	0/0:47,0:45:33.11:0,33,752	0/0:21,2:23:2.87:0,3,40	0/0:22,0:22:8.76:0,9,104	0/1:26,0:25:14.24:14,0,32	0/0:33,0:33:21.07:0,21,473	0/1:24,0:21:26.75:27,0,863	0/0:26,0:26:22.23:0,22,1153	0/1:15,0:15:31.85:32,0,171
chr10	81588154	.	TGTGTGC	T	2337.77	PASS	AB=0.940;AC=22;AF=0.393;AN=56;BaseQRankSum=3.581;DP=743;FS=11.170;HRun=0;HaplotypeScore=193.0691;InbreedingCoeff=0.0320;MQ=41.88;MQ0=17;MQRankSum=-5.514;QD=5.34;ReadPosRankSum=-0.209;VQSLOD=1.1547;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:16.86:17,0,173	0/0:4,0:4:12.03:0,12,282	0/0:39,0:6:14.90:0,15,177	0/0:54,0:15:36.86:0,37,228	0/0:21,0:21:18.81:0,19,406	0/1:17,2:19:26.69:27,0,59	1/1:23,5:27:26.94:389,27,0	1/1:33,0:30:85.68:723,86,0	0/1:24,2:25:68.05:198,0,68	0/1:23,1:24:99:172,0,406	0/0:19,0:19:17.96:0,18,343	0/1:34,3:37:41.81:53,0,42	0/1:19,6:25:3.08:357,0,3	1/1:20,6:26:7.18:102,7,0	0/0:31,0:31:13.36:0,13,541	0/0:32,0:31:13.03:0,13,402	0/1:23,0:22:3.22:3,0,456	0/1:22,0:22:26.97:27,0,306	0/1:15,0:14:99:179,0,167	0/1:21,0:20:15.60:16,0,245	0/0:45,0:43:33.09:0,33,544	0/1:16,8:24:0.01:0,0,0	0/1:19,3:22:6.93:7,0,38	1/1:25,2:26:14.23:131,14,0	0/0:32,1:33:21.06:0,21,354	0/1:23,0:20:60.58:61,0,605	0/0:26,0:26:22.20:0,22,848	0/1:15,0:15:52:52,0,149
chr10	81588156	.	TGTGC	T	3797.77	PASS	AB=0.972;AC=30;AF=0.536;AN=56;BaseQRankSum=0.787;DP=747;FS=7.750;HRun=0;HaplotypeScore=178.8631;InbreedingCoeff=0.1136;MQ=41.48;MQ0=17;MQRankSum=-4.768;QD=7.51;ReadPosRankSum=0.722;VQSLOD=1.9852;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,3:28:32.14:165,0,32	0/0:4,0:4:12.01:0,12,209	0/0:41,0:8:20.79:0,21,189	0/0:58,0:17:33.03:0,33,222	0/1:21,0:21:30.45:30,0,214	1/1:16,4:20:14.78:229,15,0	1/1:26,1:26:24.38:222,24,0	1/1:33,0:30:86.60:709,87,0	1/1:17,8:24:35.78:494,36,0	0/1:24,1:25:99:229,0,177	0/1:19,0:19:9.90:10,0,181	1/1:25,11:36:30.01:394,30,0	1/1:22,0:22:27.01:287,27,0	1/1:26,0:26:2.44:47,2,0	0/1:30,2:32:92.61:93,0,259	0/0:33,0:32:8.70:0,9,195	0/1:23,0:22:12.44:12,0,235	0/1:21,0:21:40.31:40,0,149	0/1:17,0:16:91.90:230,0,92	0/1:19,1:20:65.67:66,0,117	0/0:45,0:43:18.90:0,19,219	0/1:23,0:23:0.01:0,0,0	1/1:14,9:23:2.82:60,3,0	1/1:20,6:25:14.78:291,15,0	0/0:34,0:34:12.51:0,13,164	0/1:22,0:19:88.95:89,0,335	0/0:26,0:26:7.41:0,7,387	0/1:15,1:16:81.75:101,0,82
chr10	81588158	.	TGC	T	3818.31	PASS	AB=0.952;AC=35;AF=0.625;AN=56;BaseQRankSum=1.753;DP=737;FS=0.488;HRun=0;HaplotypeScore=167.8240;InbreedingCoeff=-0.1089;MQ=40.63;MQ0=16;MQRankSum=-3.678;QD=6.04;ReadPosRankSum=1.593;VQSLOD=3.3084;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,7:28:20.71:256,21,0	0/0:4,0:4:3.43:0,3,121	0/0:41,0:8:20.70:0,21,151	0/0:60,0:18:36.04:0,36,251	0/1:18,2:20:42.46:42,0,66	1/1:18,0:18:11.86:105,12,0	1/1:28,0:27:19.16:129,19,0	1/1:33,0:30:77.04:643,77,0	1/1:24,0:23:35.03:256,35,0	0/1:22,2:24:2.56:364,0,3	0/1:18,0:18:10.03:10,0,76	1/1:35,0:35:26.30:185,26,0	1/1:23,0:24:42.68:273,43,0	0/1:27,0:27:3.81:21,0,4	0/1:30,3:33:88.17:171,0,88	0/1:35,0:34:26.04:26,0,26	0/1:20,3:22:92.24:135,0,92	1/1:17,4:21:8.20:240,8,0	0/1:17,0:16:20.99:237,0,21	0/1:19,2:20:26.48:39,0,26	0/1:38,3:39:63.29:68,0,63	0/1:23,0:23:0.01:0,0,0	1/1:20,0:20:2.90:27,3,0	1/1:27,0:26:15.02:145,15,0	0/1:31,2:33:31.87:32,0,48	0/1:20,0:18:94.87:103,0,95	0/1:19,4:23:72.12:235,0,72	0/1:16,0:16:18.70:75,0,19
chr10	81588161	.	GCA	G	693.24	PASS	AB=0.983;AC=29;AF=0.537;AN=54;BaseQRankSum=4.039;DP=739;FS=23.233;HRun=0;HaplotypeScore=188.1815;InbreedingCoeff=-0.0151;MQ=39.98;MQ0=16;MQRankSum=-1.117;QD=1.27;ReadPosRankSum=4.396;VQSLOD=1.1232;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:16.32:98,16,0	0/0:6,0:6:17.89:0,18,204	0/0:45,0:10:29.66:0,30,368	0/0:64,0:20:52.36:0,52,614	0/1:19,0:19:5.30:5,0,141	1/1:16,1:17:4.29:12,4,0	1/1:25,0:24:5.83:18,6,0	0/1:32,0:30:7.55:8,0,11	1/1:22,1:22:14.41:74,14,0	0/1:23,0:23:22.76:66,0,23	0/0:17,0:17:10.96:0,11,159	1/1:37,3:40:1.62:77,2,0	1/1:24,0:24:16.69:61,17,0	0/1:25,1:26:10.20:20,0,10	0/1:33,1:34:56.88:57,0,173	0/1:33,0:32:3.10:3,0,116	0/1:21,0:20:46.35:46,0,211	0/1:19,0:19:30.37:102,0,30	0/0:18,0:17:4.31:0,4,134	0/1:18,2:19:19.32:19,0,38	0/1:42,0:40:23.84:24,0,145	./.	1/1:23,0:23:2.63:12,3,0	1/1:26,0:26:9.52:39,10,0	0/1:31,1:32:9.84:10,0,79	0/0:18,0:16:18.61:0,19,296	0/1:26,1:27:94.19:94,0,198	0/1:14,0:14:11.27:16,0,11
chr10	81588182	.	C	CGTGTGTAT	9432.58	PASS	AB=0.544;AC=40;AF=0.714;AN=56;BaseQRankSum=2.937;DP=918;FS=22.187;HRun=0;HaplotypeScore=228.2040;InbreedingCoeff=0.5524;MQ=42.23;MQ0=11;MQRankSum=-2.971;QD=14.06;ReadPosRankSum=1.433;VQSLOD=2.2837;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,22:35:0.94:1,1,0	0/0:7,0:7:21.06:0,21,484	0/0:50,0:17:33.09:0,33,676	0/0:71,0:33:59.12:0,59,1015	0/0:3,21:30:0.81:0,1,1	1/1:11,11:23:9:94,9,0	1/1:10,20:38:3.48:128,3,0	1/1:48,0:45:74.74:1234,75,0	1/1:13,18:38:12.04:356,12,0	1/1:1,21:27:47.75:1128,48,0	0/0:5,18:28:0.26:0,0,0	1/1:20,29:52:18.05:300,18,0	1/1:11,22:35:32.06:801,32,0	1/1:7,28:37:3.33:124,3,0	1/1:5,28:38:4.89:43,5,0	1/1:7,24:32:6.96:256,7,0	1/1:7,13:21:17.40:525,17,0	0/1:5,14:20:23.56:247,0,24	1/1:8,19:29:69.04:1596,69,0	1/1:5,15:22:2.73:126,3,0	1/1:8,36:55:5.66:61,6,0	0/0:9,22:35:0.12:0,0,1	0/0:7,17:26:0:0,0,1	1/1:25,7:31:18.82:139,19,0	0/1:2,27:30:0:0,0,0	1/1:2,16:20:44.18:1274,44,0	1/1:4,17:25:23.89:721,24,0	1/1:2,7:9:11.01:278,11,0
chr10	81588189	.	ATG	A	911.71	PASS	AB=0.927;AC=12;AF=0.214;AN=56;BaseQRankSum=1.876;DP=950;FS=0.000;HRun=0;HaplotypeScore=228.4303;InbreedingCoeff=-0.2463;MQ=42.61;MQ0=15;MQRankSum=-1.669;QD=2.33;ReadPosRankSum=3.435;VQSLOD=2.0729;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,4:39:18.03:0,18,249	0/0:9,0:9:27.06:0,27,408	0/0:46,0:18:45.13:0,45,696	0/0:62,1:28:69.15:0,69,1086	0/0:30,1:31:5.66:0,6,111	0/1:16,5:21:0.50:48,0,0	0/0:43,0:43:17.43:0,17,250	0/1:20,22:39:99:365,0,638	0/1:36,7:43:38.99:39,0,312	0/1:29,0:29:82.56:83,0,410	0/0:28,0:28:14.04:0,14,142	0/0:49,6:56:16.61:0,17,344	0/1:36,5:41:99:131,0,356	0/0:35,2:37:7.89:0,8,102	0/1:39,0:39:27.63:28,0,61	0/0:35,0:35:9.66:0,10,228	0/1:23,0:23:70.02:70,0,93	0/0:19,0:19:10.76:0,11,86	0/1:31,0:29:99:156,0,517	0/0:25,2:26:23.25:0,23,250	0/1:63,0:61:31.21:31,0,141	0/0:31,4:35:2.62:0,3,52	0/0:24,2:26:2.79:0,3,46	0/0:25,7:31:3.65:0,4,309	0/0:31,0:31:3.01:0,3,46	0/1:26,0:26:33.95:34,0,492	0/1:24,0:24:50.93:67,0,51	0/1:9,1:9:2.65:3,0,54
chr10	81591856	.	CT	C	18615.64	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=8.228;DP=792;FS=1.570;HRun=2;HaplotypeScore=85.3950;InbreedingCoeff=0.9999;MQ=82.45;MQ0=0;MQRankSum=-4.901;QD=35.12;ReadPosRankSum=2.648;VQSLOD=5.4061;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,1870	0/0:11,0:11:33.10:0,33,475	0/0:23,0:23:64.74:0,65,913	0/0:27,0:27:66.17:0,66,921	1/1:2,30:32:78.25:1013,78,0	0/0:26,0:26:78.26:0,78,1162	1/1:1,22:23:57.19:740,57,0	1/1:3,23:26:69.21:882,69,0	0/0:37,0:37:99:0,108,1583	1/1:1,29:30:87.27:1116,87,0	1/1:1,21:22:60.19:779,60,0	0/0:33,0:33:99:0,99,1483	1/1:1,25:26:75.24:974,75,0	1/1:1,40:41:99:1402,108,0	1/1:0,42:42:99:1519,117,0	1/1:1,33:34:96.15:1246,96,0	1/1:1,32:33:87.28:1130,87,0	1/1:0,14:14:39.13:506,39,0	1/1:0,24:24:72.23:934,72,0	1/1:0,25:25:63.20:818,63,0	1/1:3,43:46:99:1480,114,0	1/1:1,23:24:63.20:818,63,0	0/0:27,0:27:78.24:0,78,1130	0/0:35,0:35:99:0,105,1574	1/1:0,18:18:45.14:584,45,0	1/1:0,32:32:96.30:1232,96,0	1/1:0,25:25:72.23:935,72,0	1/1:0,13:13:39.13:506,39,0
chr10	81596273	.	CA	C	116.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.944;DP=557;FS=5.229;HRun=10;HaplotypeScore=56.6021;InbreedingCoeff=0.6128;MQ=82.52;MQ0=0;MQRankSum=-2.058;QD=10.63;ReadPosRankSum=-0.764;VQSLOD=2.4521;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:11:24.46:210,24,0	0/0:11,0:11:30.04:0,30,312	0/0:16,1:17:1.60:0,2,203	0/0:13,0:14:29.99:0,30,303	0/0:27,0:28:81.04:0,81,868	0/0:24,1:25:37.12:0,37,637	0/0:16,0:16:38.85:0,39,397	0/0:26,2:28:5.04:0,5,506	0/0:15,0:15:42.10:0,42,456	0/0:35,0:35:90.24:0,90,987	0/0:21,0:21:60.15:0,60,657	0/0:23,0:23:63.16:0,63,690	0/0:19,0:19:53.46:0,53,551	0/0:26,0:26:72.19:0,72,796	0/0:18,0:18:48.13:0,48,531	0/0:22,0:22:66.16:0,66,717	0/0:12,0:12:27.07:0,27,298	0/0:10,1:11:0.81:0,1,206	0/0:15,0:16:32.83:0,33,344	0/0:24,1:25:40.13:0,40,671	0/0:15,0:15:39.09:0,39,424	0/0:18,0:18:48.11:0,48,522	0/0:26,0:27:69:0,69,735	0/0:8,0:8:21.06:0,21,232	0/0:21,0:21:51.14:0,51,564	0/0:40,0:41:96.27:0,96,1110	0/0:29,0:28:69.16:0,69,747	0/0:5,0:5:15.04:0,15,166
chr10	81596670	.	TGG	T	11821.32	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-6.641;DP=525;FS=0.477;HRun=9;HaplotypeScore=92.0969;InbreedingCoeff=0.8700;MQ=76.22;MQ0=0;MQRankSum=-2.779;QD=27.24;ReadPosRankSum=3.723;VQSLOD=4.8792;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:17:36.10:420,36,0	0/0:4,0:4:12.04:0,12,197	0/0:14,0:14:10.35:0,10,253	0/1:11,0:10:10.65:11,0,154	1/1:4,33:37:96.27:1119,96,0	0/0:5,0:21:42.05:0,42,399	1/1:4,16:20:45.13:524,45,0	1/1:3,17:20:51.06:555,51,0	0/0:3,0:15:39.06:0,39,375	1/1:5,42:47:99:1408,123,0	1/1:4,25:29:57.16:664,57,0	0/0:3,0:11:24.01:0,24,243	1/1:0,18:18:51.15:594,51,0	1/1:3,19:22:51.15:594,51,0	1/1:3,20:23:42.12:489,42,0	1/1:2,16:18:48.14:559,48,0	1/1:0,11:11:27.08:315,27,0	1/1:0,3:3:9.03:105,9,0	1/1:0,24:24:72.18:824,72,0	1/1:5,21:26:54.14:627,54,0	1/1:0,7:7:21.06:245,21,0	1/1:1,14:15:42.12:489,42,0	0/0:5,0:19:44.79:0,45,446	0/0:2,0:7:6.01:0,6,58	1/1:1,16:17:39.11:455,39,0	1/1:1,24:25:66.12:740,66,0	1/1:5,34:39:78.22:909,78,0	1/1:0,5:5:15.04:175,15,0
chr10	81597280	.	T	TCC	11121.19	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-8.047;DP=516;FS=2.437;HRun=8;HaplotypeScore=62.9987;InbreedingCoeff=0.9786;MQ=71.43;MQ0=1;MQRankSum=0.276;QD=29.50;ReadPosRankSum=-2.504;VQSLOD=4.3990;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:19:29.86:308,30,0	0/0:10,0:10:27.07:0,27,301	0/0:15,0:13:23.84:0,24,230	0/0:9,0:9:5.62:0,6,112	1/1:5,19:25:54.05:810,54,0	0/0:21,0:21:63.17:0,63,702	1/1:6,16:22:48.13:735,48,0	1/1:6,13:22:42.96:568,43,0	0/0:17,0:17:48.13:0,48,535	1/1:5,10:14:30.10:455,30,0	1/1:4,21:25:51.17:747,51,0	0/0:16,0:16:45.11:0,45,493	1/1:2,18:20:39:617,39,0	1/1:2,21:23:42.14:666,42,0	1/1:1,20:22:39.13:618,39,0	1/1:1,11:13:30.10:476,30,0	1/1:5,20:25:48.16:762,48,0	1/1:1,9:11:29.59:437,30,0	1/1:3,9:12:24.08:379,24,0	1/1:3,19:23:44.55:593,45,0	1/1:3,15:19:21.07:333,21,0	1/1:2,13:15:36.12:568,36,0	0/0:25,0:25:66.16:0,66,735	0/0:26,0:26:60.14:0,60,668	1/1:0,15:15:33.11:524,33,0	1/1:5,17:22:45.11:667,45,0	1/1:2,12:15:30.10:476,30,0	1/1:0,13:13:24.08:380,24,0
chr10	81597703	.	G	GA	4113.04	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-11.976;DP=668;FS=0.000;HRun=6;HaplotypeScore=61.8597;InbreedingCoeff=0.9966;MQ=81.03;MQ0=0;MQRankSum=-1.609;QD=31.64;ReadPosRankSum=4.991;VQSLOD=3.5989;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:39.08:0,39,398	0/0:6,0:6:18.04:0,18,184	0/0:20,0:20:51.03:0,51,501	0/0:15,0:14:27.06:0,27,275	0/0:25,0:25:66.11:0,66,658	1/1:1,30:31:87.28:1095,87,0	0/0:17,0:17:51.12:0,51,519	0/0:31,0:31:81.18:0,81,826	1/1:2,24:26:69.22:868,69,0	0/0:33,0:33:93.19:0,93,937	0/0:30,0:30:81.17:0,81,819	1/1:4,20:24:54.17:679,54,0	0/0:29,0:29:78.17:0,78,795	0/0:33,0:33:81.17:0,81,826	0/0:27,0:27:72.16:0,72,734	0/0:35,0:35:99:0,99,995	0/0:11,0:11:27.06:0,27,275	0/0:8,0:8:21.04:0,21,209	0/0:22,0:22:57.11:0,57,575	0/0:29,0:29:72.16:0,72,734	0/0:27,0:27:72.16:0,72,734	0/0:29,0:29:81.18:0,81,826	1/1:3,27:30:78.25:981,78,0	1/1:4,15:18:39.12:491,39,0	0/0:20,0:20:60.14:0,60,611	0/0:29,0:28:81.18:0,81,827	0/0:34,0:34:93.20:0,93,949	0/0:12,0:12:36.08:0,36,367
chr10	81599219	.	T	TA	1792.23	PASS	AB=0.779;AC=10;AF=0.179;AN=56;BaseQRankSum=-6.277;DP=509;FS=2.185;HRun=10;HaplotypeScore=58.2811;InbreedingCoeff=0.7534;MQ=69.09;MQ0=3;MQRankSum=0.976;QD=16.91;ReadPosRankSum=0.369;VQSLOD=4.1011;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:29.94:0,30,243	0/0:14,0:14:35.92:0,36,291	0/0:14,0:12:5.80:0,6,105	0/1:21,0:15:10.20:10,0,63	0/0:22,0:22:56.90:0,57,462	0/0:23,0:25:72.99:0,73,578	1/1:1,10:11:28.62:292,29,0	1/1:7,15:23:53.95:546,54,0	0/0:16,0:16:35.92:0,36,296	0/0:26,0:26:62.88:0,63,515	0/0:25,0:25:68.91:0,69,566	0/0:15,0:16:43.97:0,44,350	1/1:1,17:18:45.10:473,45,0	1/1:3,16:19:4.90:462,5,0	0/0:16,0:16:47.95:0,48,394	0/0:20,0:22:48.60:0,49,367	0/0:8,0:10:11:0,11,79	0/0:18,0:18:24.13:0,24,282	0/0:4,0:4:11.99:0,12,99	0/0:21,0:22:55.96:0,56,446	0/0:13,0:14:40.97:0,41,322	0/1:4,7:12:0.76:170,0,1	0/0:21,0:21:50.89:0,51,411	0/0:22,0:22:53.89:0,54,437	0/0:21,0:22:55.97:0,56,449	0/0:27,0:28:64.91:0,65,517	0/0:19,0:20:40.95:0,41,326	0/0:14,1:15:12:0,12,294
chr10	81606708	.	A	AGG	9132.71	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-7.679;DP=613;FS=3.933;HRun=8;HaplotypeScore=77.5102;InbreedingCoeff=0.9964;MQ=77.97;MQ0=1;MQRankSum=-2.908;QD=27.59;ReadPosRankSum=-2.463;VQSLOD=4.4213;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.13:0,48,535	0/0:10,0:10:24.06:0,24,268	0/0:29,0:27:56.28:0,56,624	0/0:17,0:18:36.50:0,37,371	1/1:6,24:31:62.66:913,63,0	0/0:32,0:33:84.14:0,84,986	0/0:19,0:19:48.12:0,48,535	1/1:9,0:30:15.45:149,15,0	0/0:21,0:21:60.16:0,60,669	1/1:4,13:17:39:538,39,0	1/1:4,14:19:38.62:580,39,0	0/0:21,0:21:60.13:0,60,656	0/0:29,0:29:87.24:0,87,970	0/0:26,0:26:69.17:0,69,769	1/1:1,13:15:39.13:619,39,0	1/1:4,18:23:42.14:667,42,0	1/1:3,16:21:41.11:588,41,0	1/1:4,2:13:18.04:202,18,0	1/1:11,11:22:36.12:558,36,0	1/1:7,18:27:56.54:740,57,0	1/1:4,11:15:30.10:476,30,0	0/0:24,0:25:54.12:0,54,602	0/0:20,0:20:51.12:0,51,569	0/0:15,0:15:42.11:0,42,468	1/1:2,18:24:38.62:580,39,0	1/1:6,18:25:56.43:811,56,0	1/1:7,26:34:83.77:1282,84,0	1/1:2,11:14:29.59:430,30,0
chr10	81607084	.	G	GA	14673.24	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-13.657;DP=710;FS=7.565;HRun=8;HaplotypeScore=62.8612;InbreedingCoeff=0.9995;MQ=76.83;MQ0=0;MQRankSum=-1.687;QD=26.92;ReadPosRankSum=0.994;VQSLOD=5.5433;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,24:30:63.18:719,63,0	0/0:10,0:10:27:0,27,242	0/0:20,0:21:29.73:0,30,273	0/0:17,0:16:41.05:0,41,358	1/1:2,27:29:75.09:832,75,0	0/0:22,0:22:51.01:0,51,467	1/1:1,29:31:81.07:915,81,0	1/1:7,31:38:90.14:977,90,0	0/0:24,0:24:60.02:0,60,549	1/1:5,25:30:75.19:837,75,0	1/1:2,21:23:62.90:663,63,0	0/0:27,0:27:78.02:0,78,709	1/1:4,21:28:74.67:775,75,0	1/1:2,26:28:69.20:796,69,0	1/1:6,21:27:54.16:623,54,0	1/1:3,21:24:54.16:623,54,0	1/1:1,16:17:42.12:485,42,0	1/1:4,24:28:66.18:751,66,0	1/1:2,15:17:45.13:519,45,0	1/1:9,17:26:26.70:561,27,0	1/1:5,22:27:66.20:762,66,0	1/1:3,29:32:75.18:851,75,0	0/0:26,0:26:72.03:0,72,659	0/0:18,0:18:51.03:0,51,467	1/1:4,23:27:41.78:734,42,0	1/1:3,24:27:72.21:831,72,0	1/1:6,32:38:78.23:900,78,0	1/1:1,17:18:45.13:519,45,0
chr10	81608742	.	T	TTCTC	319.60	PASS	AB=0.938;AC=26;AF=0.542;AN=48;BaseQRankSum=0.566;DP=605;FS=5.649;HRun=0;HaplotypeScore=136.9322;InbreedingCoeff=0.2583;MQ=68.50;MQ0=27;MQRankSum=1.020;QD=0.81;ReadPosRankSum=-1.926;VQSLOD=2.1100;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:2.89:0,3,26	1/1:5,0:5:3.01:65,3,0	./.	0/1:49,0:17:0:0,0,0	./.	1/1:39,0:38:4.36:28,4,0	1/1:21,0:21:2.99:24,3,0	1/1:34,0:32:2.92:17,3,0	./.	0/1:12,0:12:0:0,0,0	0/0:12,0:14:3:0,3,28	0/1:20,0:20:6.53:7,0,40	0/1:18,0:25:7.57:8,0,38	1/1:24,1:25:3.01:68,3,0	0/1:24,0:24:0:0,0,0	1/1:17,0:21:2.74:12,3,0	0/0:18,0:19:5.91:0,6,73	0/0:16,0:16:9.02:0,9,119	./.	1/1:18,0:17:0.47:1,0,0	0/0:16,0:15:3.01:0,3,33	1/1:16,0:16:2.93:25,3,0	0/1:21,0:21:0:0,0,0	0/1:16,7:23:18.30:140,0,18	0/1:23,0:23:0:0,0,0	1/1:15,0:15:6.44:48,6,0	0/0:22,0:23:8.76:0,9,119	0/0:12,0:13:3:0,3,28
chr10	81609613	.	GA	G	422.26	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=2.517;DP=312;FS=19.343;HRun=6;HaplotypeScore=36.0010;InbreedingCoeff=0.6068;MQ=61.47;MQ0=0;MQRankSum=1.179;QD=21.11;ReadPosRankSum=0.109;VQSLOD=1.7335;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:48.12:516,48,0	0/0:6,0:6:15.05:0,15,197	0/0:2,0:2:3.01:0,3,30	0/0:7,0:5:3.64:0,4,75	0/0:21,0:21:54.18:0,54,710	0/0:17,0:17:48.15:0,48,619	0/0:1,0:1:3.01:0,3,39	0/0:33,0:33:75.24:0,75,987	0/0:10,0:10:30.10:0,30,395	0/0:10,0:10:24.08:0,24,314	0/0:19,0:19:48.16:0,48,631	0/0:13,0:13:33.09:0,33,418	0/0:4,0:4:12.04:0,12,157	0/0:7,0:7:15.05:0,15,197	./.	0/0:8,0:8:24.07:0,24,300	0/0:19,0:19:57.19:0,57,749	0/0:10,0:10:29.97:0,30,352	0/0:19,0:19:57.16:0,57,729	0/0:18,0:18:54.18:0,54,710	0/0:6,0:6:18.06:0,18,236	./.	0/0:8,0:8:18.06:0,18,237	0/0:5,0:5:15.05:0,15,197	0/0:8,0:8:21.07:0,21,276	0/0:18,0:18:54.12:0,54,678	0/0:12,0:12:36.12:0,36,473	0/0:8,0:8:24.08:0,24,316
chr10	81609757	.	C	CTTAAATTAAATAA	38574.21	PASS	AC=36;AF=0.667;AN=54;BaseQRankSum=0.532;DP=429;FS=6.796;HRun=0;HaplotypeScore=135.1668;InbreedingCoeff=0.9523;MQ=63.23;MQ0=0;MQRankSum=-12.926;QD=126.89;ReadPosRankSum=-3.562;VQSLOD=3.8869;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.27:0,78,2806	0/0:6,0:6:18.06:0,18,709	0/0:8,0:8:7.55:0,8,287	0/0:10,0:10:18.06:0,18,479	1/1:7,13:20:51.17:3022,51,0	0/0:20,0:20:57.20:0,57,2173	1/1:5,5:12:27.05:1328,27,0	1/1:39,2:44:99:5978,120,0	0/0:14,0:14:39.13:0,39,1404	1/1:8,6:16:45.14:2463,45,0	1/1:14,8:22:57.19:3089,57,0	0/0:18,0:18:48.16:0,48,1844	1/1:6,2:9:24.08:1336,24,0	1/1:4,5:9:21.07:1220,21,0	1/1:3,2:6:12.04:619,12,0	1/1:1,1:2:6.02:391,6,0	1/1:8,3:15:21.03:1035,21,0	1/1:6,8:16:33.07:1817,33,0	1/1:23,3:27:75.22:3436,75,0	1/1:9,7:20:60.09:2493,60,0	./.	1/1:1,2:3:9.03:587,9,0	0/0:11,0:11:33.11:0,33,1164	0/0:10,0:10:27.09:0,27,1055	1/1:9,7:19:48.16:2540,48,0	1/1:13,9:24:66.14:3216,66,0	1/1:10,5:19:32.85:1797,33,0	1/1:14,5:21:45.15:2208,45,0
chr10	81611357	.	TA	T	2453.12	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-9.703;DP=601;FS=0.000;HRun=6;HaplotypeScore=101.3589;InbreedingCoeff=0.9956;MQ=69.96;MQ0=0;MQRankSum=-0.632;QD=24.05;ReadPosRankSum=2.436;VQSLOD=3.0107;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.14:0,57,730	0/0:12,0:12:30.07:0,30,377	0/0:8,0:8:15.04:0,15,187	0/0:11,0:11:29.75:0,30,303	0/0:32,0:32:90.25:0,90,1151	1/1:2,20:22:51.13:548,51,0	0/0:14,0:14:33.11:0,33,434	0/0:25,0:25:63.19:0,63,794	1/1:0,12:12:27.07:290,27,0	0/0:32,0:32:90.28:0,90,1159	0/0:24,0:24:69.01:0,69,806	1/1:0,27:27:72.14:761,72,0	0/0:38,0:38:99:0,108,1374	0/0:23,0:23:63.18:0,63,788	0/0:21,0:21:54.13:0,54,656	0/0:20,0:20:60.20:0,60,790	0/0:21,0:21:57.16:0,57,718	0/0:18,0:18:54.14:0,54,691	0/0:19,0:19:57.18:0,57,736	0/0:30,0:30:87.27:0,87,1132	0/0:17,0:17:48.15:0,48,614	0/0:14,0:14:33.11:0,33,434	1/1:1,21:22:54.13:579,54,0	1/1:3,16:19:42.10:451,42,0	0/0:33,0:33:87.25:0,87,1094	0/0:26,0:26:75.20:0,75,957	0/0:27,0:26:75.22:0,75,959	0/0:13,0:13:32.98:0,33,374
chr10	81611387	.	TG	T	12774.86	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-1.745;DP=636;FS=0.707;HRun=7;HaplotypeScore=75.1341;InbreedingCoeff=0.9995;MQ=78.67;MQ0=0;MQRankSum=-4.035;QD=27.71;ReadPosRankSum=0.879;VQSLOD=5.4769;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.18:0,57,711	0/0:11,0:11:33.11:0,33,415	0/0:18,0:18:47.19:0,47,547	0/0:14,0:13:28.39:0,28,305	1/1:1,35:36:99:1061,105,0	0/0:20,0:20:54.17:0,54,679	1/1:0,14:14:42.10:428,42,0	1/1:4,21:25:63.09:621,63,0	0/0:14,0:14:33.10:0,33,402	1/1:2,26:28:78.16:788,78,0	1/1:0,34:34:96.18:968,96,0	0/0:28,0:28:72.23:0,72,906	1/1:0,35:35:99:1009,99,0	1/1:1,21:22:57.13:581,57,0	1/1:1,22:23:60.13:612,60,0	1/1:1,21:22:28.41:605,28,0	1/1:1,20:21:57.13:582,57,0	1/1:0,17:17:51.12:520,51,0	1/1:1,15:16:45.10:459,45,0	1/1:2,30:32:90.14:905,90,0	1/1:1,19:20:51.11:520,51,0	1/1:1,9:10:27.06:275,27,0	0/0:29,0:29:75.24:0,75,943	0/0:21,0:21:51.16:0,51,642	1/1:1,33:34:78.18:796,78,0	1/1:2,26:28:78.16:788,78,0	1/1:2,27:29:78.17:796,78,0	1/1:0,15:15:45.10:459,45,0
chr10	81612820	.	T	TAGAG	1513.59	PASS	AB=1.000;AC=26;AF=0.565;AN=46;BaseQRankSum=-2.139;DP=519;FS=40.256;HRun=0;HaplotypeScore=113.1378;InbreedingCoeff=0.5179;MQ=66.37;MQ0=8;MQRankSum=-0.371;QD=5.13;ReadPosRankSum=0.134;VQSLOD=0.7405;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:34:9.03:176,9,0	1/1:5,0:5:9.02:132,9,0	./.	0/1:23,0:15:0:0,0,0	0/0:15,0:16:5.97:0,6,54	1/1:17,0:17:30.08:547,30,0	1/1:24,2:28:5.75:82,6,0	./.	1/1:11,0:11:6.02:118,6,0	./.	0/0:16,0:17:3:0,3,28	1/1:17,0:17:5.91:130,6,0	0/0:17,0:17:5.53:0,6,49	0/0:26,0:25:12.03:0,12,182	0/0:24,0:24:20.98:0,21,293	0/0:14,0:14:3.01:0,3,44	0/0:15,0:16:2.93:0,3,46	1/1:7,6:15:3.90:72,4,0	./.	0/1:23,0:23:0:0,0,0	0/1:30,0:29:35.49:35,0,40	0/1:10,0:10:0:0,0,0	1/1:15,0:15:12.02:222,12,0	1/1:21,0:20:9.01:138,9,0	1/1:21,0:21:1.54:4,2,0	1/1:22,0:22:0.47:1,0,0	0/0:25,0:26:14.35:0,14,183	./.
chr10	81613088	.	TAGATAGATAGAC	T	5430.58	PASS	AB=0.997;AC=35;AF=0.625;AN=56;BaseQRankSum=1.990;DP=539;FS=0.495;HRun=0;HaplotypeScore=207.1834;InbreedingCoeff=-0.1133;MQ=58.18;MQ0=17;MQRankSum=1.442;QD=11.04;ReadPosRankSum=2.951;VQSLOD=3.7121;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:3.79:0,4,151	0/0:6,0:6:18:0,18,231	0/0:13,0:8:24.01:0,24,238	0/0:7,0:3:2.18:0,2,58	0/1:37,0:36:18.07:88,0,18	0/1:20,0:19:99:200,0,246	1/1:13,0:10:29.96:249,30,0	1/1:33,0:26:58.22:471,58,0	0/1:11,0:10:98.22:103,0,98	0/1:22,0:22:99:243,0,386	0/1:21,0:19:36.97:87,0,37	0/1:14,0:14:88.82:89,0,479	1/1:2,18:20:3.01:105,3,0	1/1:0,20:20:12.04:439,12,0	0/1:16,0:16:99:131,0,320	0/1:13,0:12:17.98:88,0,18	0/1:21,0:21:25.92:196,0,26	0/1:19,0:19:55.09:195,0,55	1/1:12,0:12:1.94:281,2,0	1/1:41,0:41:12.30:149,12,0	1/1:8,0:8:18.02:233,18,0	1/1:1,19:20:6.41:125,6,0	0/1:25,0:23:99:176,0,397	0/1:13,0:13:77.97:78,0,106	0/1:28,0:28:38.96:176,0,39	1/1:3,0:28:67.89:712,68,0	1/1:23,0:23:65.63:558,66,0	1/1:11,0:11:32.85:258,33,0
chr10	81613092	.	TAGATAGACAGAC	T	7799.65	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=0.074;DP=544;FS=1.780;HRun=0;HaplotypeScore=202.6119;InbreedingCoeff=0.5627;MQ=58.73;MQ0=17;MQRankSum=0.015;QD=19.16;ReadPosRankSum=3.127;VQSLOD=4.0973;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:36.53:0,37,542	0/0:7,0:7:18.06:0,18,359	0/0:14,0:9:27.07:0,27,489	0/0:10,0:6:4.38:0,4,258	1/1:2,34:35:2.94:112,3,0	0/0:19,0:18:10.46:0,10,286	0/1:14,0:11:0.43:0,0,0	1/1:33,0:26:59.30:948,59,0	0/0:11,0:10:7.92:0,8,188	0/1:23,0:23:99:627,0,178	1/1:3,15:16:3.01:112,3,0	0/0:15,0:15:20.97:0,21,396	1/1:18,0:18:2.75:88,3,0	1/1:20,0:20:12.04:370,12,0	0/1:18,0:18:99:420,0,146	1/1:2,11:12:3.01:112,3,0	0/1:21,0:20:3.74:486,0,4	1/1:19,0:19:20.64:481,21,0	1/1:15,0:14:33.09:653,33,0	1/1:0,38:38:12.51:221,13,0	1/1:9,0:9:21.04:314,21,0	1/1:20,0:20:3.48:91,3,0	0/0:25,0:23:18.35:0,18,387	0/0:12,0:12:2.96:0,3,119	1/1:2,27:29:6.02:224,6,0	1/1:27,0:26:68.80:993,69,0	1/1:25,0:25:66.16:1031,66,0	1/1:11,0:11:33.11:514,33,0
chr10	81613096	.	TAGACAGAC	T	7573.25	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=-0.215;DP=536;FS=5.984;HRun=0;HaplotypeScore=175.7941;InbreedingCoeff=0.6586;MQ=61.05;MQ0=15;MQRankSum=-0.526;QD=18.84;ReadPosRankSum=1.394;VQSLOD=4.0069;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:36.10:0,36,558	0/0:6,0:6:15.05:0,15,265	0/0:15,0:10:30.09:0,30,557	0/0:13,0:9:11.60:0,12,335	1/1:35,0:34:3:67,3,0	0/0:17,0:16:7.46:0,7,141	0/1:13,0:10:0.39:0,0,0	1/1:10,24:30:72.06:1050,72,0	0/0:11,0:10:4.39:0,4,95	1/1:5,18:23:54.15:879,54,0	1/1:18,0:16:3.01:68,3,0	0/0:15,0:15:6.02:0,6,127	1/1:18,0:18:2.88:43,3,0	1/1:20,0:20:12.04:191,12,0	1/1:18,0:18:39:705,39,0	1/1:12,0:11:3.01:68,3,0	0/1:21,0:20:2.98:470,0,3	1/1:17,0:17:8.94:417,9,0	1/1:15,0:14:36.12:618,36,0	1/1:38,0:38:9.50:140,9,0	1/1:10,0:10:18.06:286,18,0	1/1:20,0:20:3.01:46,3,0	0/0:23,0:21:6.36:0,6,145	0/0:11,0:11:2.56:0,3,69	1/1:27,0:27:6.02:135,6,0	1/1:27,0:26:51.20:849,51,0	1/1:24,0:24:63.20:985,63,0	1/1:12,0:12:36.12:557,36,0
chr10	81613780	.	AT	A	12053.25	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=9.516;DP=630;FS=14.770;HRun=7;HaplotypeScore=59.6106;InbreedingCoeff=0.9996;MQ=81.57;MQ0=0;MQRankSum=-4.789;QD=25.98;ReadPosRankSum=1.791;VQSLOD=4.2265;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:84.26:0,84,1042	0/0:11,0:11:33.11:0,33,415	0/0:16,0:16:41.38:0,41,418	0/0:28,0:27:57.16:0,57,692	1/1:2,21:23:60.09:601,60,0	1/1:0,25:25:72.16:735,72,0	0/0:18,0:18:54.15:0,54,653	1/1:6,31:37:93.20:948,93,0	1/1:0,13:13:36.08:367,36,0	1/1:3,21:24:63.13:636,63,0	1/1:2,26:28:69.15:704,69,0	1/1:4,25:29:63.14:643,63,0	0/0:21,0:21:60.17:0,60,729	0/0:22,0:22:63.20:0,63,793	1/1:1,20:21:51.11:520,51,0	1/1:2,16:18:45.10:459,45,0	1/1:1,18:19:45.10:459,45,0	1/1:2,9:11:27.06:275,27,0	1/1:0,26:26:78.14:781,78,0	1/1:1,36:37:99:1071,105,0	1/1:2,23:25:60.14:612,60,0	0/0:17,0:17:45.13:0,45,553	1/1:1,19:20:54.12:550,54,0	1/1:1,13:14:27.06:275,27,0	1/1:3,28:31:72.16:734,72,0	1/1:1,15:16:45.10:459,45,0	1/1:6,27:33:81.18:826,81,0	1/1:1,13:14:39.09:398,39,0
chr10	81615155	.	GC	G	2319.26	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.355;DP=659;FS=5.445;HRun=2;HaplotypeScore=61.4622;InbreedingCoeff=0.9994;MQ=70.27;MQ0=0;MQRankSum=-3.115;QD=34.11;ReadPosRankSum=0.863;VQSLOD=3.8484;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,68:68:99:2414,187,0	0/0:11,0:11:33.11:0,33,494	0/0:19,0:19:57.17:0,57,821	0/0:19,0:19:52.40:0,52,740	0/0:22,0:22:66.22:0,66,989	0/0:21,0:21:63.21:0,63,942	0/0:24,0:24:69.23:0,69,1034	0/0:25,0:25:69.23:0,69,1031	0/0:25,0:25:75.24:0,75,1104	0/0:21,0:21:63.21:0,63,916	0/0:18,0:18:51.16:0,51,737	0/0:30,0:30:90.28:0,90,1309	0/0:32,0:32:96.32:0,96,1429	0/0:31,0:31:93.32:0,93,1393	0/0:30,0:30:90.29:0,90,1329	0/0:23,0:23:63.20:0,63,925	0/0:27,0:27:81.25:0,81,1191	0/0:13,0:13:39.10:0,39,556	0/0:16,0:16:39.10:0,39,544	0/0:15,0:15:42.14:0,42,629	0/0:23,0:23:69.22:0,69,1010	0/0:14,0:14:42.14:0,42,628	0/0:24,0:24:72.24:0,72,1055	0/0:24,0:24:68.91:0,69,1034	0/0:23,0:23:69.22:0,69,1012	0/0:21,0:21:63.20:0,63,926	0/0:28,0:28:81.25:0,81,1161	0/0:12,0:12:36.12:0,36,539
chr10	81617694	.	A	AT	9644.38	PASS	AC=30;AF=0.556;AN=54;BaseQRankSum=-12.568;DP=498;FS=2.039;HRun=6;HaplotypeScore=43.1282;InbreedingCoeff=0.9695;MQ=57.74;MQ0=0;MQRankSum=-2.516;QD=32.26;ReadPosRankSum=-2.387;VQSLOD=4.2135;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.12:0,54,551	0/0:15,0:15:45.07:0,45,450	0/0:2,0:2:3:0,3,27	./.	1/1:1,23:24:63.16:775,63,0	0/0:20,0:20:45.09:0,45,459	0/0:12,0:12:27.06:0,27,276	1/1:6,30:36:90.24:1102,90,0	0/0:14,0:14:33.07:0,33,337	1/1:2,22:24:66.21:830,66,0	1/1:2,23:25:66.21:830,66,0	0/0:16,0:16:48.11:0,48,490	0/0:28,0:28:78.18:0,78,796	0/0:24,0:24:66.14:0,66,673	1/1:1,21:22:60.15:737,60,0	1/1:2,13:15:36.08:436,36,0	1/1:1,17:18:48.15:604,48,0	1/1:0,13:13:36.07:435,36,0	1/1:2,15:17:45.14:564,45,0	1/1:2,27:29:75.20:926,75,0	1/1:2,5:7:12.04:151,12,0	0/0:17,0:17:48.09:0,48,482	0/0:22,0:22:60.14:0,60,612	0/0:9,0:9:21.04:0,21,214	1/1:1,9:9:27.09:340,27,0	1/1:2,18:20:57.18:709,57,0	1/1:2,21:22:57.18:717,57,0	1/1:2,14:16:39.12:491,39,0
chr10	81618341	.	A	AG	27655.42	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-14.071;DP=770;FS=19.880;HRun=0;HaplotypeScore=66.8958;InbreedingCoeff=0.9977;MQ=94.16;MQ0=0;MQRankSum=-9.578;QD=43.35;ReadPosRankSum=6.125;VQSLOD=2.8261;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:99:0,129,1788	0/0:14,0:14:39.12:0,39,530	0/0:32,0:32:93.28:0,93,1232	0/0:42,0:42:99:0,117,1539	1/1:0,30:30:84.29:1342,84,0	1/1:1,28:29:78.27:1246,78,0	1/1:0,24:24:69.24:1102,69,0	1/1:0,44:44:99:2015,129,0	1/1:0,30:30:84.29:1332,84,0	1/1:0,28:28:84.26:1308,84,0	1/1:0,26:26:78.27:1247,78,0	1/1:0,25:25:57.19:911,57,0	1/1:0,26:26:69.07:1103,69,0	1/1:3,26:29:69.23:1103,69,0	1/1:0,43:43:99:1868,117,0	1/1:0,35:35:87.30:1391,87,0	1/1:0,27:27:75.26:1198,75,0	1/1:0,12:12:36.12:574,36,0	1/1:1,15:16:45.15:720,45,0	1/1:0,30:30:72.24:1140,72,0	1/1:1,36:37:99:1630,102,0	1/1:1,21:22:60.20:958,60,0	1/1:0,22:22:54.18:863,54,0	1/1:0,14:14:42.14:671,42,0	1/1:0,27:27:69.24:1103,69,0	1/1:0,24:24:72.25:1151,72,0	1/1:1,31:32:87.30:1390,87,0	1/1:0,6:6:18.06:288,18,0
chr10	81620608	.	G	GCATA	11559.11	PASS	AB=0.665;AC=43;AF=0.796;AN=54;BaseQRankSum=-4.615;DP=520;FS=5.684;HRun=0;HaplotypeScore=96.2341;InbreedingCoeff=0.4571;MQ=68.65;MQ0=5;MQRankSum=2.091;QD=28.26;ReadPosRankSum=1.364;VQSLOD=4.3371;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:18:21.02:0,21,196	0/1:6,4:10:28.33:326,0,28	0/0:27,0:20:3.01:0,3,42	./.	0/1:10,13:23:16.29:597,0,16	1/1:11,0:17:6.02:103,6,0	0/0:10,0:10:2.62:0,3,146	0/0:41,0:41:12:0,12,104	1/1:10,0:22:17.65:270,18,0	1/1:3,10:13:30.10:704,30,0	1/1:10,0:13:5.85:104,6,0	1/1:8,0:23:28.91:474,29,0	1/1:11,12:25:39.13:911,39,0	1/1:6,13:19:27.09:634,27,0	1/1:10,17:28:36.12:845,36,0	0/1:12,15:27:45.09:870,0,45	1/1:12,0:12:17.09:146,17,0	1/1:10,8:20:11.47:575,11,0	1/1:6,8:16:30.10:695,30,0	1/1:4,14:19:36.12:844,36,0	1/1:7,7:12:8.09:410,8,0	1/1:3,7:10:12.04:278,12,0	1/1:5,0:6:5.66:104,6,0	1/1:10,0:16:5.93:60,6,0	1/1:3,14:17:21.07:493,21,0	1/1:11,11:22:36.11:780,36,0	1/1:10,13:24:36.12:845,36,0	1/1:3,9:12:21.07:493,21,0
chr10	81621244	.	C	CAT	5856.90	PASS	AB=0.694;AC=34;AF=0.607;AN=56;BaseQRankSum=-3.971;DP=671;FS=0.462;HRun=0;HaplotypeScore=98.5582;InbreedingCoeff=0.4153;MQ=58.59;MQ0=18;MQRankSum=2.307;QD=13.13;ReadPosRankSum=4.448;VQSLOD=4.7447;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:0.42:0,0,245	0/0:7,0:7:17.99:0,18,166	0/0:43,0:12:20.60:0,21,212	0/0:50,0:17:28.67:0,29,284	0/1:4,16:20:8.35:199,0,8	1/1:19,0:19:14.88:114,15,0	0/0:19,0:19:7.81:0,8,107	1/1:23,0:22:44.08:451,44,0	1/1:28,0:28:35.84:299,36,0	1/1:3,23:26:59.65:691,60,0	0/0:1,7:8:2.60:0,3,10	1/1:34,0:33:6.07:231,6,0	0/0:27,0:26:48.94:0,49,367	0/0:25,0:25:24.03:0,24,229	1/1:3,20:24:14.74:375,15,0	1/1:3,19:22:11.62:319,12,0	0/1:5,18:23:8.92:220,0,9	0/1:7,1:8:21.48:87,0,21	1/1:4,14:20:48.55:438,49,0	1/1:3,24:26:0.88:204,1,0	1/1:6,39:46:17.03:631,17,0	0/1:10,0:9:19.03:19,0,57	1/1:15,0:15:3.83:69,4,0	1/1:24,0:23:24.29:321,24,0	1/1:2,14:16:8.42:264,8,0	0/1:7,16:22:15.39:458,0,15	1/1:1,23:24:12.08:369,12,0	0/1:3,9:12:6.16:100,0,6
chr10	81621246	.	T	TAC	3185.47	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=5.752;DP=666;FS=17.111;HRun=0;HaplotypeScore=108.3870;InbreedingCoeff=0.2475;MQ=59.98;MQ0=18;MQRankSum=-1.435;QD=7.62;ReadPosRankSum=6.057;VQSLOD=1.9631;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:50.30:0,50,509	0/0:7,0:7:12.04:0,12,149	0/0:45,0:15:7.72:0,8,330	0/0:48,0:17:23.10:0,23,336	0/1:19,0:19:17.30:116,0,17	1/1:4,15:20:9.03:134,9,0	0/0:20,0:20:13.72:0,14,181	0/0:24,0:23:4.76:0,5,55	1/1:9,18:28:24.08:390,24,0	0/1:25,0:25:30.73:158,0,31	0/0:9,0:8:5.98:0,6,47	1/1:6,27:34:27.09:432,27,0	0/0:26,0:25:29.67:0,30,467	0/0:24,0:24:29.25:0,29,369	1/1:22,0:22:21.04:218,21,0	0/1:23,0:22:55.72:150,0,56	0/1:22,0:22:7.81:111,0,8	1/1:8,0:8:5.13:37,5,0	0/1:19,0:19:18.22:64,0,18	0/1:28,0:27:16.99:103,0,17	1/1:45,0:45:3.16:341,3,0	0/1:10,0:9:11.93:12,0,95	1/1:4,10:15:5.94:97,6,0	1/1:6,18:23:30.10:490,30,0	1/1:17,0:16:14.69:148,15,0	0/1:22,0:21:99:116,0,104	0/1:24,0:24:13.65:185,0,14	1/1:12,0:12:6.02:72,6,0
chr10	81621526	.	T	TC	15073.26	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-4.341;DP=429;FS=20.366;HRun=2;HaplotypeScore=56.8699;InbreedingCoeff=0.9497;MQ=84.52;MQ0=0;MQRankSum=-7.973;QD=38.65;ReadPosRankSum=4.648;VQSLOD=2.8520;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:10:24.08:345,24,0	0/0:9,0:9:27.07:0,27,322	0/0:17,0:17:48.13:0,48,569	0/0:13,0:13:36.08:0,36,421	1/1:0,24:24:69.23:993,69,0	1/1:1,22:23:63.21:904,63,0	1/1:1,12:13:33.11:468,33,0	1/1:3,34:37:99:1384,99,0	1/1:0,16:16:45.15:647,45,0	1/1:4,17:21:54.15:756,54,0	1/1:1,19:20:51.17:733,51,0	1/1:2,7:9:21.07:298,21,0	1/1:0,19:19:57.19:820,57,0	1/1:1,23:24:66.22:948,66,0	1/1:1,18:19:54.18:777,54,0	1/1:0,15:15:45.15:647,45,0	1/1:0,15:15:39.13:561,39,0	1/1:0,3:3:9.03:130,9,0	1/1:2,10:12:30.10:429,30,0	1/1:0,16:16:48.16:691,48,0	1/1:0,9:9:24.08:346,24,0	1/1:0,4:4:9.03:130,9,0	1/1:1,8:9:21.07:302,21,0	1/1:0,5:5:15.05:215,15,0	1/1:1,18:20:53.86:734,54,0	1/1:0,12:12:36.07:477,36,0	1/1:3,19:22:54.18:777,54,0	1/1:0,13:13:39.13:561,39,0
chr10	81621587	.	C	CTG	1296.58	PASS	AB=0.970;AC=28;AF=0.519;AN=54;BaseQRankSum=7.752;DP=405;FS=30.731;HRun=0;HaplotypeScore=117.6933;InbreedingCoeff=-0.0404;MQ=48.30;MQ0=12;MQRankSum=0.930;QD=4.58;ReadPosRankSum=-1.737;VQSLOD=1.1477;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:2.94:18,3,0	0/0:3,0:3:9.03:0,9,126	0/0:25,0:12:29.81:0,30,295	0/0:30,0:12:25.95:0,26,294	1/1:23,0:23:8.70:69,9,0	0/1:28,2:30:14.83:248,0,15	1/1:9,0:9:8.93:83,9,0	0/0:46,0:40:19.44:0,19,350	1/1:8,3:10:11.93:134,12,0	0/0:11,0:10:26.59:0,27,176	0/1:15,0:15:5.79:6,0,21	0/1:12,1:13:9.99:97,0,10	0/1:18,0:18:31.72:111,0,32	0/1:16,0:16:1.30:60,0,1	0/1:13,0:13:4.88:5,0,17	0/1:10,0:10:45.84:50,0,46	0/1:9,0:10:14.21:17,0,14	0/1:2,0:2:6.72:14,0,7	0/1:14,0:13:19.07:19,0,121	0/1:14,0:15:32.40:59,0,32	./.	1/1:6,0:6:2.99:43,3,0	1/1:11,3:14:19.93:170,20,0	0/0:3,0:3:0.47:0,0,1	1/1:13,0:13:16.12:78,16,0	0/1:10,0:9:8.23:63,0,8	0/1:18,0:19:15:86,0,15	0/1:15,0:15:28.83:32,0,29
chr10	81621589	.	C	CTGTGTGTGTGTG	5123.56	PASS	AB=0.980;AC=35;AF=0.673;AN=52;BaseQRankSum=-2.282;DP=425;FS=2.710;HRun=0;HaplotypeScore=225.8806;InbreedingCoeff=0.1840;MQ=44.74;MQ0=12;MQRankSum=-3.890;QD=14.94;ReadPosRankSum=-1.810;VQSLOD=3.6570;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:4.32:92,4,0	0/0:3,0:3:3.01:0,3,104	0/0:25,0:12:4.13:0,4,90	0/0:29,0:11:2.20:0,2,59	1/1:24,1:26:5.43:93,5,0	0/1:30,0:30:68.33:68,0,172	0/0:10,0:10:8.49:0,8,64	1/1:44,0:38:42.99:826,43,0	0/1:12,0:11:20.38:20,0,99	1/1:16,0:15:24.03:472,24,0	1/1:13,0:15:4.98:24,5,0	0/1:12,0:12:26.25:26,0,90	0/1:17,0:17:98.96:99,0,124	0/1:18,0:18:77.07:77,0,105	0/1:10,1:12:0:0,0,0	1/1:8,2:11:6.02:221,6,0	1/1:13,0:14:14.17:436,14,0	1/1:3,0:3:8.90:165,9,0	1/1:14,0:13:15.04:325,15,0	1/1:15,1:17:6.02:186,6,0	./.	0/0:6,0:6:2.97:0,3,10	0/1:15,0:15:15.03:15,0,86	./.	1/1:10,3:14:3.01:49,3,0	1/1:15,0:13:33.91:887,34,0	1/1:18,0:20:23.96:661,24,0	1/1:10,0:12:23.94:381,24,0
chr10	81622863	.	G	GT	430.94	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.666;DP=498;FS=5.087;HRun=6;HaplotypeScore=71.9622;InbreedingCoeff=0.9590;MQ=65.13;MQ0=2;MQRankSum=-0.831;QD=28.73;ReadPosRankSum=1.140;VQSLOD=4.4420;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:44.63:526,45,0	0/0:9,0:9:27.01:0,27,258	0/0:17,0:10:18.91:0,19,213	0/0:17,0:11:17.77:0,18,164	0/0:37,0:37:99:0,105,1058	0/0:25,0:25:59.17:0,59,605	0/0:13,0:13:39.09:0,39,398	0/0:30,0:30:83.98:0,84,813	0/0:19,0:19:54.12:0,54,546	0/0:18,0:18:54.12:0,54,549	0/0:24,0:24:69.14:0,69,697	0/0:21,0:21:60.13:0,60,614	0/0:26,0:26:72.14:0,72,727	0/0:13,0:13:36.03:0,36,355	0/0:11,0:11:24.04:0,24,238	0/0:12,0:12:33.08:0,33,337	0/0:14,0:14:39.09:0,39,398	0/0:9,0:9:24.05:0,24,245	0/0:24,0:24:59.88:0,60,584	0/0:20,0:20:57.12:0,57,581	0/0:6,0:6:15.03:0,15,153	0/0:14,0:14:42.09:0,42,428	0/0:21,0:21:63.10:0,63,631	0/0:8,0:8:24.06:0,24,250	0/0:22,0:22:60.14:0,60,612	0/0:25,0:25:69.13:0,69,692	0/0:21,0:21:63.13:0,63,635	0/0:7,0:7:21.05:0,21,214
chr10	81622875	.	TTTTG	T	3007.73	PASS	AB=0.944;AC=14;AF=0.250;AN=56;BaseQRankSum=4.797;DP=504;FS=1.046;HRun=0;HaplotypeScore=99.0424;InbreedingCoeff=0.8224;MQ=59.47;MQ0=3;MQRankSum=-3.907;QD=24.65;ReadPosRankSum=2.624;VQSLOD=3.6266;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,8:16:23.08:464,23,0	0/1:7,1:8:36.16:36,0,202	0/0:16,0:8:3.01:0,3,71	0/1:14,0:8:0:0,0,0	0/0:37,0:37:66.22:0,66,1473	1/1:8,13:21:48.16:771,48,0	0/0:15,0:15:27.08:0,27,569	0/0:29,0:29:47.96:0,48,786	1/1:7,10:17:39.12:592,39,0	0/0:19,0:19:36.12:0,36,801	0/0:24,0:24:60.19:0,60,1318	1/1:14,6:20:30.09:454,30,0	0/0:29,0:29:66.19:0,66,1440	0/0:15,0:15:27.09:0,27,603	0/0:12,0:12:27.09:0,27,647	0/0:13,0:13:27.07:0,27,523	0/0:16,0:16:24.05:0,24,490	0/0:11,0:11:21.07:0,21,471	0/0:20,0:20:18.06:0,18,433	0/0:22,0:22:42.14:0,42,949	0/0:7,0:7:12.04:0,12,229	0/0:17,0:17:39.11:0,39,886	1/1:10,9:19:42.10:636,42,0	1/1:4,3:7:15.05:241,15,0	0/0:24,0:24:45.14:0,45,1002	0/0:27,0:27:60.20:0,60,1400	0/0:22,0:22:42.10:0,42,914	0/0:7,0:7:9.03:0,9,154
chr10	81622926	.	GTTT	G	9688.50	PASS	AB=0.568;AC=42;AF=0.750;AN=56;BaseQRankSum=-12.211;DP=598;FS=0.779;HRun=14;HaplotypeScore=113.6135;InbreedingCoeff=0.7526;MQ=61.98;MQ0=14;MQRankSum=1.369;QD=21.34;ReadPosRankSum=2.384;VQSLOD=3.9792;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,14:22:31.44:366,31,0	0/0:5,0:5:9.03:0,9,169	0/0:46,0:16:30.86:0,31,334	0/0:31,0:10:7.96:0,8,209	1/1:9,22:32:56.91:643,57,0	0/1:5,2:26:38.69:39,0,42	1/1:2,10:13:25.63:313,26,0	1/1:9,14:24:43.57:506,44,0	0/0:9,0:31:32.64:0,33,121	1/1:11,17:27:51.03:595,51,0	1/1:6,20:28:58.56:681,59,0	0/1:4,1:14:20.33:20,0,30	1/1:3,20:26:65.95:720,66,0	1/1:3,13:17:28.57:348,29,0	1/1:2,15:19:40.61:471,41,0	1/1:3,15:19:43.60:506,44,0	1/1:3,6:8:12.02:140,12,0	1/1:4,10:14:6.76:260,7,0	1/1:6,11:18:34.56:403,35,0	1/1:2,22:26:58.56:681,59,0	1/1:1,13:14:21.02:243,21,0	1/1:2,18:20:51.08:596,51,0	0/0:5,0:16:12.46:0,12,27	0/0:2,0:14:16.67:0,17,49	1/1:3,15:19:37.40:453,37,0	1/1:6,26:35:69.04:802,69,0	1/1:4,20:24:66.10:746,66,0	1/1:0,4:5:14.98:158,15,0
chr10	81623240	.	TCATTTCTGGA	T	27917.11	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=15.434;DP=672;FS=1.177;HRun=0;HaplotypeScore=226.0874;InbreedingCoeff=0.9476;MQ=72.53;MQ0=0;MQRankSum=-16.444;QD=58.40;ReadPosRankSum=1.744;VQSLOD=4.1606;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,26:31:48.16:1335,48,0	0/0:11,0:11:33.11:0,33,1660	0/0:25,0:25:51.17:0,51,2174	0/0:24,0:24:51.17:0,51,2302	1/1:7,24:31:30.10:934,30,0	0/0:23,0:23:60.21:0,60,2886	1/1:2,18:20:39.13:1214,39,0	1/1:11,7:18:18.06:474,18,0	0/0:30,0:30:78.26:0,78,3563	1/1:10,30:40:99:3174,105,0	1/1:2,14:16:30.10:895,30,0	0/0:25,0:25:63.20:0,63,3053	1/1:6,20:26:66.23:2052,66,0	1/1:10,22:32:69.02:2103,69,0	1/1:2,24:26:63.22:1961,63,0	1/1:5,18:23:42.14:1308,42,0	1/1:4,19:23:27.09:841,27,0	1/1:2,2:4:6.02:187,6,0	1/1:6,13:19:42.14:1170,42,0	1/1:1,22:23:51.17:1495,51,0	1/1:9,4:13:12.04:316,12,0	1/1:1,16:17:36.12:1121,36,0	0/0:22,0:22:57.20:0,57,2776	0/0:34,0:34:93.32:0,93,4560	1/1:6,27:33:66.23:1998,66,0	1/1:2,30:32:90.25:2539,90,0	1/1:13,32:45:87.30:2708,87,0	1/1:3,3:6:3.01:93,3,0
chr10	81624433	.	TACAC	T	6483.59	PASS	AB=0.719;AC=29;AF=0.558;AN=52;BaseQRankSum=5.220;DP=583;FS=4.126;HRun=0;HaplotypeScore=117.0454;InbreedingCoeff=0.7002;MQ=71.35;MQ0=5;MQRankSum=-0.371;QD=18.74;ReadPosRankSum=1.325;VQSLOD=4.5620;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:9.02:0,9,130	./.	./.	0/0:30,0:16:0.47:0,0,1	1/1:15,11:26:48.12:725,48,0	0/0:22,0:24:28.79:0,29,587	0/0:10,0:18:13.72:0,14,61	0/1:24,7:31:12.38:68,0,12	0/0:17,0:17:18.06:0,18,398	1/1:13,12:25:36.10:513,36,0	1/1:14,8:23:28.71:445,29,0	0/0:24,0:26:47.62:0,48,856	0/0:12,0:12:6.26:0,6,38	0/0:11,0:15:10.98:0,11,49	1/1:8,19:28:51.15:762,51,0	1/1:9,18:28:42.13:633,42,0	1/1:8,14:22:32.68:517,33,0	1/1:4,8:12:9.16:184,9,0	1/1:13,4:17:18.06:260,18,0	1/1:11,15:26:48.15:711,48,0	0/1:9,10:19:0.94:174,0,1	0/1:6,1:11:32.74:33,0,57	0/0:12,0:12:17.76:0,18,269	0/0:20,0:22:24.21:0,24,431	1/1:9,14:23:27.09:425,27,0	1/1:18,6:24:2.90:268,3,0	1/1:12,13:25:21.03:529,21,0	1/1:0,5:5:15.05:236,15,0
chr10	81624889	.	AAC	A	2793.92	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.361;DP=683;FS=4.841;HRun=0;HaplotypeScore=123.7423;InbreedingCoeff=0.9922;MQ=73.00;MQ0=3;MQRankSum=-4.738;QD=29.41;ReadPosRankSum=-0.743;VQSLOD=5.1922;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.20:0,63,1026	0/0:7,0:7:15.05:0,15,257	0/0:32,0:29:33.22:0,33,716	0/0:17,0:16:24.08:0,24,397	0/0:28,0:28:81.28:0,81,1377	0/0:36,0:36:96.33:0,96,1646	1/1:1,21:22:54.18:709,54,0	0/0:45,0:45:99:0,132,2159	0/0:23,0:23:60.21:0,60,1024	0/0:32,0:32:90.30:0,90,1495	0/0:21,0:21:54.17:0,54,899	0/0:34,0:34:96.31:0,96,1618	1/1:2,27:28:69.22:906,69,0	1/1:5,22:26:60.19:788,60,0	0/0:30,0:30:81.26:0,81,1359	0/0:28,0:28:60.19:0,60,1000	0/0:15,0:15:42.14:0,42,707	0/0:7,0:7:18.06:0,18,308	0/0:23,0:23:63.22:0,63,1078	0/0:32,0:32:90.31:0,90,1535	0/0:18,0:18:45.15:0,45,771	1/1:0,17:16:42.14:552,42,0	0/0:23,0:23:66.23:0,66,1120	0/0:23,0:23:57.11:0,57,910	0/0:27,0:27:75.22:0,75,1231	0/0:25,0:25:72.25:0,72,1227	0/0:30,0:30:81.28:0,81,1369	0/0:9,0:9:24.08:0,24,398
chr10	81624968	.	CCACACACA	C	2053.42	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=2.197;DP=640;FS=24.196;HRun=0;HaplotypeScore=310.1158;InbreedingCoeff=0.8598;MQ=56.47;MQ0=28;MQRankSum=-7.425;QD=18.84;ReadPosRankSum=-0.897;VQSLOD=1.3155;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:39.13:0,39,1259	./.	0/0:40,0:14:31.68:0,32,660	0/0:38,0:21:30.49:0,30,722	0/0:31,0:31:57.20:0,57,1745	0/1:22,0:22:7.28:7,0,445	1/1:6,17:20:10.94:281,11,0	0/0:38,0:40:93.28:0,93,1938	0/0:24,0:23:39.64:0,40,737	0/0:26,0:26:66.23:0,66,2231	0/0:25,0:25:39.13:0,39,1205	0/0:24,0:24:24.98:0,25,624	1/1:11,13:24:48.16:1067,48,0	1/1:13,10:23:24.08:520,24,0	0/0:14,1:15:30.57:0,31,910	0/0:22,0:21:31.02:0,31,857	0/0:11,0:13:30.10:0,30,962	0/0:11,0:12:21.06:0,21,463	0/0:17,0:17:42.10:0,42,1205	0/0:25,0:24:54.17:0,54,1596	0/0:21,0:21:27.09:0,27,790	1/1:9,7:17:15.05:335,15,0	0/0:17,0:16:27.09:0,27,438	0/0:26,0:27:23.60:0,24,426	0/0:19,0:21:45.11:0,45,1382	0/0:26,0:25:66.23:0,66,2007	0/0:19,0:18:51.18:0,51,1539	0/0:4,0:5:12.04:0,12,384
chr10	81624979	.	CACACACACAGAGAGAGAGAGAGAGAGAGAGAG	C	3853.14	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=1.020;DP=629;FS=7.188;HRun=0;HaplotypeScore=499.6416;InbreedingCoeff=0.9487;MQ=50.10;MQ0=31;MQRankSum=-5.907;QD=47.57;ReadPosRankSum=3.000;VQSLOD=-0.0825;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:45.15:0,45,2580	0/0:4,0:4:6.02:0,6,309	0/0:36,0:11:29.46:0,29,654	0/0:32,0:15:29.60:0,30,738	0/0:25,0:25:57.20:0,57,2380	0/0:27,0:26:48.14:0,48,1572	1/1:20,0:17:10.54:280,11,0	0/0:43,0:40:99:0,108,2602	0/0:23,0:22:48.16:0,48,1849	0/0:25,0:25:72.25:0,72,3948	0/0:21,0:21:39.13:0,39,1915	0/0:21,0:21:48.16:0,48,2612	1/1:20,2:22:48.16:1443,48,0	1/1:17,4:23:23.92:1607,24,0	0/0:14,0:14:30.57:0,31,1715	0/0:23,0:22:40.05:0,40,2954	0/0:14,0:14:36.06:0,36,2497	0/0:12,0:11:26.98:0,27,1787	0/0:15,0:15:45.11:0,45,2462	0/0:27,0:26:58.74:0,59,2975	0/0:16,0:16:30.10:0,30,1880	1/1:14,2:15:15.05:523,15,0	0/0:21,0:20:27.09:0,27,1038	0/0:29,0:27:27.79:0,28,1183	0/0:22,0:22:51.13:0,51,2411	0/0:32,0:31:90.31:0,90,5776	0/0:23,0:22:57.20:0,57,3385	0/0:5,0:5:15.05:0,15,1291
chr10	81624985	.	CACAGAGAGAGAG	C	3136.32	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=-1.799;DP=595;FS=4.926;HRun=0;HaplotypeScore=289.1244;InbreedingCoeff=0.8341;MQ=45.28;MQ0=27;MQRankSum=1.154;QD=12.45;ReadPosRankSum=2.524;VQSLOD=2.0036;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:66.75:67,0,313	0/0:5,0:5:7.83:0,8,99	0/0:30,0:7:17.50:0,18,111	0/1:22,0:8:4.81:5,0,113	0/0:25,0:25:50.92:0,51,461	1/1:23,1:24:35.61:496,36,0	1/1:20,0:17:11.36:69,11,0	0/0:35,0:32:63.94:0,64,397	1/1:19,1:20:13.88:402,14,0	0/0:26,0:26:74.66:0,75,1001	0/0:21,0:21:38.97:0,39,458	1/1:21,2:23:56.89:751,57,0	1/1:19,0:19:46.63:396,47,0	1/1:21,0:21:20.67:504,21,0	0/0:13,0:13:26.98:0,27,478	0/0:22,0:21:36.02:0,36,911	0/0:16,0:16:45.36:0,45,939	0/0:11,0:10:22.88:0,23,574	0/0:14,0:14:35.85:0,36,621	0/0:29,0:28:51:0,51,786	0/0:15,0:15:23.95:0,24,603	1/1:15,0:14:11.68:121,12,0	1/1:20,0:19:26.54:217,27,0	1/1:25,2:26:30.41:319,30,0	0/0:20,0:20:44.94:0,45,634	0/0:31,0:30:89.52:0,90,1335	0/0:24,0:23:56.93:0,57,927	0/0:6,0:6:18.01:0,18,444
chr10	81624987	.	CAGAGAGAGAG	C	1524.07	PASS	AB=0.942;AC=16;AF=0.320;AN=50;BaseQRankSum=3.291;DP=604;FS=23.791;HRun=0;HaplotypeScore=279.4490;InbreedingCoeff=0.5634;MQ=45.13;MQ0=25;MQRankSum=-2.923;QD=6.83;ReadPosRankSum=0.857;VQSLOD=1.0523;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,2:38:36.52:147,0,37	0/0:6,0:6:7.83:0,8,99	./.	./.	0/0:25,0:25:3:0,3,26	1/1:21,4:25:11.70:330,12,0	./.	0/0:35,0:32:0:0,0,0	1/1:18,2:19:6.02:171,6,0	0/0:28,0:28:21.07:0,21,606	0/0:23,0:23:6.01:0,6,147	1/1:21,2:23:12.04:338,12,0	1/1:19,0:19:6.02:140,6,0	1/1:21,0:21:18.06:405,18,0	0/0:13,0:13:6.02:0,6,270	0/0:24,0:23:21.04:0,21,815	0/0:16,0:16:21.07:0,21,681	0/0:12,0:11:13.60:0,14,449	0/0:14,0:14:9.03:0,9,320	0/0:29,0:28:15.01:0,15,419	0/0:14,0:14:15.04:0,15,461	1/1:15,0:14:3.01:61,3,0	0/0:16,2:19:0:0,0,0	1/1:26,0:25:3.35:84,3,0	0/0:20,0:20:9.02:0,9,305	0/1:34,0:33:8.27:8,0,858	0/0:27,0:26:27.40:0,27,771	0/0:6,0:6:12.04:0,12,356
chr10	81625296	.	T	TTG	6636.97	PASS	AB=0.645;AC=18;AF=0.333;AN=54;BaseQRankSum=-13.612;DP=658;FS=2.907;HRun=0;HaplotypeScore=104.2312;InbreedingCoeff=0.3740;MQ=58.33;MQ0=13;MQRankSum=0.687;QD=21.00;ReadPosRankSum=-0.647;VQSLOD=4.9858;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:22:5.42:0,5,28	0/0:8,0:8:18.05:0,18,207	0/0:25,0:15:11.84:0,12,93	0/0:21,0:13:12.89:0,13,94	0/1:13,14:28:27.78:667,0,28	0/0:7,0:27:45.45:0,45,223	0/0:3,0:16:19.89:0,20,98	0/0:37,0:38:41.33:0,41,481	0/0:7,0:24:31.19:0,31,154	1/1:13,21:35:35.94:914,36,0	0/1:13,18:31:9.24:646,0,9	0/0:7,0:28:48.29:0,48,237	0/0:7,0:29:34.01:0,34,242	0/0:6,0:28:53.97:0,54,265	0/1:9,13:23:61.33:469,0,61	0/1:6,17:23:1.38:432,0,1	0/1:5,11:16:21.41:341,0,21	0/1:9,2:11:28.46:40,0,28	1/1:14,8:21:21.07:316,21,0	1/1:6,15:22:7.64:523,8,0	0/1:10,11:22:4.39:388,0,4	0/0:6,0:22:42.61:0,43,209	0/0:5,0:23:36.93:0,37,182	0/0:10,0:22:25.57:0,26,126	1/1:5,15:20:3.48:479,3,0	0/1:11,21:32:3.46:710,0,3	1/1:7,20:26:37.05:711,37,0	./.
chr10	81625409	.	TGAATTTAC	T	820.81	PASS	AB=0.552;AC=1;AF=0.018;AN=56;BaseQRankSum=5.548;DP=678;FS=0.000;HRun=0;HaplotypeScore=167.3182;InbreedingCoeff=-0.0183;MQ=84.15;MQ0=0;MQRankSum=-4.841;QD=51.30;ReadPosRankSum=1.320;VQSLOD=2.9700;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.32:0,93,3977	0/0:10,0:10:30.10:0,30,1316	0/0:23,0:23:53.67:0,54,2017	0/0:19,0:19:50.75:0,51,1823	0/0:33,0:33:99:0,99,4254	0/0:23,0:23:66.21:0,66,2688	0/0:18,0:18:51.18:0,51,2170	0/0:22,0:22:63.22:0,63,2698	0/0:28,0:28:78.25:0,78,3235	0/0:25,0:25:69.23:0,69,2916	0/0:23,0:23:69.24:0,69,3006	0/0:25,0:25:72.25:0,72,3174	0/0:28,0:28:84.29:0,84,3657	0/0:35,0:35:99:0,105,4400	0/0:26,0:26:72.25:0,72,3163	0/0:32,0:32:90.31:0,90,3773	0/1:3,13:15:96.83:895,0,97	0/0:17,0:17:45.12:0,45,1773	0/0:30,0:30:90.27:0,90,3494	0/0:28,0:28:84.29:0,84,3681	0/0:18,0:18:51.18:0,51,2219	0/0:20,0:20:57.18:0,57,2220	0/0:22,0:22:57.18:0,57,2297	0/0:23,0:23:66.20:0,66,2695	0/0:21,0:21:63.20:0,63,2665	0/0:34,0:34:99:0,102,4215	0/0:37,0:37:99:0,111,4645	0/0:9,0:9:24.08:0,24,1062
chr10	81627636	.	G	GTA	5009.76	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-9.729;DP=728;FS=2.910;HRun=0;HaplotypeScore=81.4257;InbreedingCoeff=0.9187;MQ=67.28;MQ0=1;MQRankSum=0.191;QD=31.71;ReadPosRankSum=1.810;VQSLOD=6.7451;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,22:27:51.17:855,51,0	0/0:19,0:19:48.16:0,48,617	0/0:9,0:7:11.77:0,12,121	0/1:19,0:12:4.94:5,0,15	0/0:48,0:48:99:0,132,1681	1/1:4,17:21:39.13:658,39,0	0/0:14,0:14:36.10:0,36,449	0/0:40,0:40:99:0,99,1224	1/1:0,29:27:75.26:1265,75,0	0/0:43,0:43:99:0,105,1297	0/0:29,0:29:72.22:0,72,912	1/1:3,16:19:39.13:658,39,0	0/0:34,0:34:84.24:0,84,1062	0/0:24,0:24:57.17:0,57,719	0/0:30,0:30:84.25:0,84,1053	0/0:23,0:23:54.17:0,54,694	0/0:25,0:25:54.16:0,54,678	0/0:17,0:17:42.09:0,42,522	0/0:21,0:21:52.98:0,53,661	0/0:39,0:39:99:0,105,1309	0/0:14,0:14:42.14:0,42,540	0/0:19,0:19:42.14:0,42,540	1/1:5,20:25:60.21:1012,60,0	1/1:1,16:17:33.11:557,33,0	0/0:44,0:44:99:0,105,1337	0/0:25,0:25:66.21:0,66,849	0/0:42,0:42:99:0,111,1427	0/0:10,0:10:24.08:0,24,309
chr10	81628866	.	ACGGGAGGAGC	A	16763.29	PASS	AB=0.526;AC=35;AF=0.648;AN=54;BaseQRankSum=18.077;DP=454;FS=1.978;HRun=0;HaplotypeScore=296.1515;InbreedingCoeff=0.8709;MQ=84.01;MQ0=0;MQRankSum=-17.284;QD=68.14;ReadPosRankSum=6.681;VQSLOD=3.9830;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,5457	0/0:8,0:8:24.06:0,24,1174	0/0:24,0:24:72.23:0,72,3381	0/0:14,0:14:42.14:0,42,1909	1/1:1,17:18:54.19:1258,54,0	0/0:22,0:22:66.23:0,66,3498	1/1:0,10:10:30.10:744,30,0	1/1:1,1:2:3:26,3,0	0/0:25,0:25:75.26:0,75,3900	1/1:0,8:8:24.08:613,24,0	1/1:0,18:18:54.19:1291,54,0	0/0:25,0:25:75.26:0,75,3693	1/1:0,11:11:33.11:823,33,0	0/1:2,18:20:99:1301,0,105	1/1:2,21:23:69.21:1617,69,0	1/1:0,20:20:60.21:1498,60,0	1/1:2,8:10:30.07:647,30,0	1/1:0,4:4:12.04:305,12,0	1/1:0,8:8:24.08:615,24,0	1/1:9,21:30:64.55:1521,65,0	1/1:1,1:2:6.01:100,6,0	1/1:0,9:9:27.09:668,27,0	0/0:20,0:20:60.21:0,60,3076	0/0:32,0:32:96.31:0,96,4879	1/1:0,20:20:60.21:1469,60,0	1/1:2,22:24:69.70:1691,70,0	1/1:1,8:9:24.55:575,25,0	./.
chr10	81628877	.	TTGCG	T	6752.22	PASS	AB=0.514;AC=33;AF=0.635;AN=52;BaseQRankSum=18.223;DP=454;FS=0.342;HRun=0;HaplotypeScore=271.0970;InbreedingCoeff=0.8836;MQ=90.98;MQ0=0;MQRankSum=-17.598;QD=28.86;ReadPosRankSum=8.518;VQSLOD=3.7907;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,2828	0/0:8,0:8:24.08:0,24,694	0/0:30,0:30:89.89:0,90,2340	0/0:18,0:18:51.13:0,51,1244	1/1:0,18:18:50.89:480,51,0	0/0:22,0:22:66.23:0,66,1877	1/1:0,10:10:30.07:310,30,0	./.	0/0:29,0:29:87.27:0,87,2325	1/1:0,8:8:24.06:259,24,0	1/1:0,18:18:51.47:495,51,0	0/0:23,0:23:69.24:0,69,1957	1/1:0,11:11:33.08:342,33,0	0/1:1,18:19:29.68:496,0,30	1/1:0,21:21:63.15:651,63,0	1/1:0,20:20:60.14:621,60,0	1/1:0,8:8:24.06:252,24,0	1/1:0,4:4:12.03:130,12,0	1/1:0,8:8:24.06:260,24,0	1/1:8,21:29:66.11:628,66,0	1/1:0,1:1:3.01:32,3,0	1/1:0,9:9:27.06:275,27,0	0/0:22,0:22:63.22:0,63,1795	0/0:32,0:32:96.33:0,96,2742	1/1:0,20:20:59.50:597,60,0	1/1:0,22:22:66.16:702,66,0	1/1:0,8:8:22.86:221,23,0	./.
chr10	81628883	.	AG	A	5622.62	PASS	AC=36;AF=0.667;AN=54;BaseQRankSum=18.266;DP=474;FS=1.516;HRun=3;HaplotypeScore=251.7307;InbreedingCoeff=0.9383;MQ=91.84;MQ0=3;MQRankSum=-16.986;QD=22.14;ReadPosRankSum=6.971;VQSLOD=3.7191;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1372	0/0:9,0:9:27.09:0,27,382	0/0:29,0:29:85.82:0,86,1169	0/0:21,0:21:51.13:0,51,696	1/1:0,18:18:49.25:376,49,0	0/0:22,0:22:63.19:0,63,888	1/1:0,12:12:32.62:258,33,0	1/1:1,1:2:3:27,3,0	0/0:26,0:26:78.25:0,78,1099	1/1:0,8:8:23.94:198,24,0	1/1:0,19:19:52.91:418,53,0	0/0:22,0:22:66.21:0,66,934	1/1:0,11:11:32.93:271,33,0	1/1:1,18:19:13.68:396,14,0	1/1:1,21:22:65.75:535,66,0	1/1:1,20:21:62.75:507,63,0	1/1:3,8:10:29.95:247,30,0	1/1:0,7:6:14.96:123,15,0	1/1:0,9:8:23.90:198,24,0	1/1:8,21:29:71.90:558,72,0	1/1:0,1:1:3:25,3,0	1/1:0,9:9:26.94:219,27,0	0/0:21,0:21:63.21:0,63,907	0/0:35,0:35:99:0,99,1422	1/1:2,20:22:61.36:488,61,0	1/1:0,23:23:68.94:582,69,0	1/1:1,8:9:25.19:196,25,0	./.
chr10	81628885	.	G	GAA	11358.61	PASS	AC=36;AF=0.667;AN=54;BaseQRankSum=19.363;DP=588;FS=0.313;HRun=0;HaplotypeScore=324.9123;InbreedingCoeff=0.9687;MQ=85.59;MQ0=3;MQRankSum=-18.346;QD=31.20;ReadPosRankSum=3.165;VQSLOD=4.0871;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1586	0/0:9,0:9:27.09:0,27,439	0/0:31,0:31:85.98:0,86,1374	0/0:22,0:22:54.15:0,54,839	1/1:26,0:26:69.84:803,70,0	0/0:21,0:21:63.22:0,63,1025	1/1:21,0:21:59.98:788,60,0	1/1:16,0:16:45.14:753,45,0	0/0:28,0:28:78.26:0,78,1240	1/1:17,0:17:49.90:684,50,0	1/1:20,0:20:54.58:466,55,0	0/0:22,0:22:66.23:0,66,1077	1/1:18,0:18:53.95:623,54,0	1/1:21,0:21:13.83:454,14,0	1/1:29,1:30:89.81:940,90,0	1/1:21,2:23:65.85:596,66,0	1/1:14,3:16:44.99:558,45,0	1/1:10,0:9:24.04:309,24,0	1/1:16,0:15:39.01:492,39,0	1/1:39,0:38:99:1202,101,0	1/1:2,0:2:2.99:23,3,0	1/1:14,0:14:38.89:369,39,0	0/0:21,0:21:63.22:0,63,1028	0/0:35,0:35:99:0,102,1639	1/1:28,2:29:79.11:862,79,0	1/1:28,0:28:84.02:882,84,0	1/1:16,0:15:45.89:554,46,0	./.
chr10	81629183	.	C	CT	21723.20	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=11.758;DP=711;FS=12.574;HRun=0;HaplotypeScore=136.7129;InbreedingCoeff=0.9825;MQ=84.71;MQ0=0;MQRankSum=-6.420;QD=41.62;ReadPosRankSum=0.475;VQSLOD=2.7358;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,37:38:96.33:1534,96,0	0/0:10,0:10:30.10:0,30,418	0/0:27,0:27:78.26:0,78,1086	0/0:27,0:27:78.24:0,78,1041	1/1:0,23:23:66.23:1053,66,0	0/0:21,0:21:63.21:0,63,880	1/1:4,17:21:51.13:787,51,0	1/1:4,29:33:90.26:1356,90,0	0/0:23,0:23:66.07:0,66,878	1/1:1,26:27:81.26:1270,81,0	1/1:0,19:19:42.14:672,42,0	0/0:25,0:25:72.24:0,72,1006	1/1:1,31:32:78.27:1245,78,0	1/1:1,37:38:99:1678,105,0	1/1:1,38:40:99:1662,105,0	1/1:1,26:27:36.33:1157,36,0	1/1:0,26:26:66.23:1055,66,0	1/1:2,25:27:72.25:1151,72,0	1/1:2,17:18:51.16:782,51,0	1/1:1,24:25:63.21:1004,63,0	1/1:1,41:42:99:1678,105,0	1/1:0,20:20:54.18:862,54,0	0/0:16,0:16:45.14:0,45,610	0/0:40,0:40:99:0,120,1655	1/1:0,21:21:63.21:1006,63,0	1/1:0,19:19:57.18:887,57,0	1/1:3,19:22:50.93:787,51,0	1/1:0,3:3:6.02:96,6,0
chr10	81629594	.	C	CAAAAAAAA	23131.26	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=6.186;DP=587;FS=3.580;HRun=8;HaplotypeScore=160.5139;InbreedingCoeff=0.8733;MQ=63.05;MQ0=0;MQRankSum=-12.035;QD=50.07;ReadPosRankSum=-3.750;VQSLOD=0.6863;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:24:42.14:1244,42,0	0/0:12,0:12:33.08:0,33,711	0/1:23,0:21:26.97:27,0,752	0/0:21,0:18:10.30:0,10,616	1/1:9,3:31:63.13:1591,63,0	0/0:23,0:23:60.15:0,60,1368	1/1:5,0:16:39.13:1124,39,0	1/1:18,0:33:84.08:1398,84,0	0/0:16,0:16:45.14:0,45,976	1/1:9,0:26:65.54:1673,66,0	1/1:7,0:13:30.10:864,30,0	0/0:15,0:15:45.14:0,45,953	1/1:5,3:23:33.11:1004,33,0	1/1:13,1:27:36.59:1012,37,0	1/1:4,0:22:36.12:968,36,0	1/1:5,3:23:45.15:1433,45,0	1/1:6,1:20:34.93:1001,35,0	1/1:1,0:10:12.04:358,12,0	1/1:6,0:23:66.18:1575,66,0	1/1:6,1:26:57.11:1487,57,0	1/1:2,0:8:15.05:437,15,0	1/1:1,0:10:15.05:397,15,0	0/0:21,0:21:57.15:0,57,1253	0/0:17,0:17:45.06:0,45,984	1/1:15,2:40:75.26:2248,75,0	1/1:9,0:28:75.21:1776,75,0	1/1:10,1:29:45.53:1332,46,0	1/1:2,0:5:6.02:183,6,0
chr10	81629911	.	A	AG	1663.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-10.036;DP=772;FS=1.233;HRun=4;HaplotypeScore=77.7548;InbreedingCoeff=0.9953;MQ=81.46;MQ0=0;MQRankSum=-3.933;QD=33.27;ReadPosRankSum=0.631;VQSLOD=4.1681;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,47:50:99:1758,126,0	0/0:12,0:12:36.09:0,36,399	0/0:25,0:25:63.14:0,63,693	0/0:30,0:30:75.15:0,75,807	0/0:34,0:34:90.24:0,90,1007	0/0:30,0:30:84.16:0,84,928	0/0:11,0:11:30.07:0,30,331	0/0:41,0:41:99:0,99,1103	0/0:26,0:26:72.20:0,72,816	0/0:33,0:33:93.26:0,93,1046	0/0:20,0:20:51:0,51,535	0/0:29,0:29:84.21:0,84,932	0/0:41,0:41:99:0,120,1352	0/0:38,0:38:99:0,108,1224	0/0:28,0:28:78.18:0,78,854	0/0:26,0:26:75.21:0,75,851	0/0:28,0:28:81.12:0,81,853	0/0:24,0:24:66.19:0,66,749	0/0:28,0:28:78.21:0,78,870	0/0:31,0:31:87.18:0,87,954	0/0:26,0:26:69.20:0,69,783	0/0:22,0:22:60.11:0,60,657	0/0:29,0:29:66.15:0,66,722	0/0:19,0:19:45.13:0,45,510	0/0:27,0:27:75.15:0,75,825	0/0:24,0:24:69.18:0,69,769	0/0:33,0:32:90.22:0,90,1001	0/0:7,0:7:21.02:0,21,224
chr10	81630693	.	GA	G	8302.46	PASS	AB=0.600;AC=27;AF=0.482;AN=56;BaseQRankSum=13.963;DP=568;FS=4.512;HRun=7;HaplotypeScore=51.8266;InbreedingCoeff=0.9271;MQ=76.59;MQ0=0;MQRankSum=-0.240;QD=26.19;ReadPosRankSum=2.913;VQSLOD=5.5719;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.22:0,69,868	0/0:12,1:13:5.52:0,6,373	0/0:17,0:17:37.92:0,38,436	0/0:7,0:6:5.69:0,6,44	1/1:3,32:34:90.20:917,90,0	0/0:24,0:24:66.20:0,66,818	0/0:11,0:11:33.11:0,33,414	0/0:32,1:33:56.64:0,57,993	0/0:17,0:17:36.11:0,36,442	1/1:4,24:28:72.16:733,72,0	1/1:2,24:26:69.15:703,69,0	0/0:20,0:20:54.16:0,54,667	0/0:21,0:21:57.18:0,57,716	0/0:20,0:20:51.15:0,51,627	1/1:0,19:19:54.12:550,54,0	1/1:1,14:15:39.09:398,39,0	1/1:0,24:24:54.12:551,54,0	1/1:0,12:12:36.08:367,36,0	1/1:4,15:19:45.10:458,45,0	1/1:3,31:34:90.20:918,90,0	1/1:1,9:10:21.05:214,21,0	0/0:19,0:19:45.13:0,45,541	0/0:14,0:14:39.12:0,39,491	0/0:11,0:11:30.10:0,30,376	1/1:0,23:23:66.15:673,66,0	1/1:3,30:33:87.18:880,87,0	1/1:3,30:33:87.20:887,87,0	0/1:2,4:6:1.39:52,0,1
chr10	81632017	.	G	GA	26093.32	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=1.202;DP=813;FS=1.726;HRun=1;HaplotypeScore=101.6042;InbreedingCoeff=0.9973;MQ=80.80;MQ0=0;MQRankSum=-4.620;QD=41.75;ReadPosRankSum=2.612;VQSLOD=4.9092;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,59:61:99:2518,169,0	0/0:15,0:15:45.15:0,45,582	0/0:18,0:18:47.51:0,48,585	0/0:24,0:24:63.46:0,63,772	1/1:1,31:32:90.30:1349,90,0	0/0:27,0:27:81.25:0,81,1036	1/1:1,22:23:57.19:854,57,0	1/1:1,36:36:99:1471,102,0	0/0:21,0:21:63.19:0,63,804	1/1:2,30:32:90.30:1349,90,0	1/1:0,25:25:72.24:1079,72,0	0/0:28,0:28:81.26:0,81,1051	1/1:1,33:34:93.32:1394,93,0	1/1:0,32:32:87.29:1303,87,0	1/1:0,43:43:99:1844,123,0	1/1:0,45:45:99:1888,126,0	1/1:0,22:22:63.21:944,63,0	1/1:0,6:6:15.05:225,15,0	1/1:2,25:27:64.96:1051,65,0	1/1:0,31:31:93.32:1393,93,0	1/1:0,35:35:99:1574,105,0	1/1:0,38:38:99:1459,99,0	0/0:25,0:25:75.20:0,75,954	0/0:30,0:30:90.29:0,90,1165	1/1:0,25:25:75.25:1124,75,0	1/1:0,32:32:96.32:1434,96,0	1/1:0,35:33:93.31:1393,93,0	1/1:0,10:10:30.10:450,30,0
chr10	81633655	.	A	AAATATCT	47909.41	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-3.391;DP=642;FS=0.687;HRun=0;HaplotypeScore=136.6696;InbreedingCoeff=0.9698;MQ=71.90;MQ0=1;MQRankSum=-17.984;QD=102.81;ReadPosRankSum=-0.599;VQSLOD=5.7860;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,10:20:36.12:1432,36,0	0/0:12,0:12:36.12:0,36,978	0/0:22,0:22:54.17:0,54,1417	0/0:16,0:16:45.15:0,45,1117	1/1:6,26:36:81.23:3180,81,0	0/0:26,0:26:75.24:0,75,2016	1/1:4,12:21:39.13:1616,39,0	1/1:10,21:35:99:3775,105,0	0/0:28,0:28:81.28:0,81,2224	1/1:8,18:26:72.20:2822,72,0	1/1:5,20:30:69.24:2780,69,0	0/0:24,0:24:69.22:0,69,1855	1/1:5,24:31:84.29:3454,84,0	1/1:2,17:24:57.20:2362,57,0	1/1:6,24:33:87.30:3596,87,0	1/1:4,24:30:78.27:3264,78,0	1/1:0,7:9:21.07:878,21,0	1/1:0,7:9:21.07:851,21,0	1/1:5,8:15:42:1591,42,0	1/1:6,24:32:87.30:3511,87,0	1/1:1,10:11:33.11:1332,33,0	1/1:4,12:20:42.14:1719,42,0	0/0:25,0:25:72.21:0,72,1894	0/0:23,0:23:69.24:0,69,1929	1/1:5,17:22:63.22:2608,63,0	1/1:2,22:25:75.26:3066,75,0	1/1:6,25:35:96.33:3947,96,0	1/1:0,1:1:3.01:126,3,0
chr10	81636106	.	CT	C	3105.92	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-2.694;DP=719;FS=7.971;HRun=9;HaplotypeScore=103.4060;InbreedingCoeff=0.9880;MQ=73.47;MQ0=0;MQRankSum=-2.480;QD=19.29;ReadPosRankSum=2.612;VQSLOD=3.5619;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.24:0,81,935	0/0:12,0:12:33.07:0,33,367	0/0:21,0:20:13.70:0,14,390	0/0:17,0:18:27.28:0,27,307	0/0:31,0:31:64.16:0,64,784	1/1:1,30:31:81.04:741,81,0	0/0:23,0:23:66.17:0,66,743	1/1:32,0:32:57.86:191,58,0	1/1:0,23:23:66.04:604,66,0	0/0:22,0:22:60.08:0,60,643	0/0:25,0:25:69.11:0,69,767	1/1:4,24:28:63.02:577,63,0	0/0:40,0:40:99:0,105,1184	0/0:19,2:21:23.67:0,24,517	0/0:29,0:29:63.65:0,64,870	0/0:43,0:43:99:0,111,1233	0/0:35,0:35:99:0,102,1130	0/0:4,0:5:14.83:0,15,130	0/0:14,0:14:24.94:0,25,349	0/0:36,0:36:94.06:0,94,1043	0/0:13,0:13:33.01:0,33,340	0/0:28,0:28:69.19:0,69,787	1/1:3,21:24:63.03:577,63,0	1/1:1,22:23:66.04:604,66,0	0/0:29,0:29:81.13:0,81,892	0/0:33,0:35:92.84:0,93,1000	0/0:42,0:42:99:0,117,1333	0/0:5,0:5:15.04:0,15,172
chr10	81636114	.	TTC	T	1388.17	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=-6.049;DP=725;FS=6.133;HRun=0;HaplotypeScore=126.5983;InbreedingCoeff=0.2370;MQ=77.02;MQ0=0;MQRankSum=-3.458;QD=12.39;ReadPosRankSum=-7.502;VQSLOD=1.1463;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.29:0,96,1690	0/0:12,0:12:36.11:0,36,642	0/0:25,0:24:64.95:0,65,961	0/0:18,0:18:47.75:0,48,632	0/1:31,0:31:1.63:2,0,414	0/0:34,0:34:89.62:0,90,504	0/0:25,0:25:75.23:0,75,1309	1/1:0,33:33:99:1385,99,0	0/0:26,0:26:72.25:0,72,406	0/1:26,0:26:66.30:66,0,311	0/0:26,0:26:2.94:0,3,408	0/0:25,0:25:63.34:0,63,341	0/0:37,0:37:99:0,111,1999	0/0:20,0:20:57.05:0,57,969	0/0:28,0:28:50.67:0,51,520	0/0:39,0:39:83.13:0,83,729	0/0:36,0:36:54.52:0,55,670	0/0:6,0:6:3.85:0,4,78	0/1:15,0:15:37.57:38,0,165	0/0:35,0:35:46.61:0,47,624	0/0:12,0:12:25.96:0,26,197	0/0:26,0:26:75.25:0,75,1372	0/0:23,0:23:66.36:0,66,361	0/0:24,0:24:69.25:0,69,381	0/0:29,0:29:58.50:0,59,537	0/0:36,0:36:27.36:0,27,513	0/0:39,0:39:99:0,116,856	0/1:7,0:7:20.82:21,0,95
chr10	81638018	.	ATT	A	8641.14	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-15.043;DP=569;FS=1.064;HRun=10;HaplotypeScore=98.9271;InbreedingCoeff=0.9950;MQ=75.84;MQ0=1;MQRankSum=-1.010;QD=27.87;ReadPosRankSum=3.323;VQSLOD=5.0544;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:22:45.38:0,45,164	0/0:4,0:4:12.04:0,12,190	0/0:15,0:16:27.71:0,28,405	0/0:17,0:17:43.01:0,43,634	1/1:4,27:31:78.19:870,78,0	0/0:1,0:17:27.91:0,28,100	0/0:2,0:21:42.42:0,42,146	0/0:8,0:26:51.10:0,51,210	0/0:1,0:10:25.45:0,25,102	1/1:2,35:37:99:1169,105,0	1/1:1,21:22:57.15:635,57,0	0/0:1,0:21:48.09:0,48,183	0/0:5,0:18:32.44:0,32,111	0/0:4,0:21:42.92:0,43,162	1/1:2,14:16:30.08:334,30,0	1/1:2,19:21:51.13:569,51,0	1/1:2,22:24:63.16:702,63,0	1/1:0,13:13:36.09:401,36,0	1/1:5,26:31:63.45:851,63,0	1/1:2,17:19:42.07:466,42,0	1/1:2,15:17:42.11:468,42,0	0/0:2,0:24:52.83:0,53,189	0/0:2,0:20:41.19:0,41,144	0/0:2,0:22:52.91:0,53,204	1/1:0,12:11:27.07:301,27,0	1/1:4,24:28:72.18:803,72,0	1/1:4,25:29:66.16:736,66,0	1/1:0,10:10:30.08:334,30,0
chr10	81638232	.	CTT	C	1289.29	PASS	AB=0.722;AC=17;AF=0.304;AN=56;BaseQRankSum=8.451;DP=648;FS=3.448;HRun=12;HaplotypeScore=137.9591;InbreedingCoeff=0.7329;MQ=70.56;MQ0=9;MQRankSum=-9.716;QD=6.93;ReadPosRankSum=4.954;VQSLOD=0.6443;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,3:36:19.92:20,0,215	0/0:14,0:14:33.10:0,33,463	0/0:49,0:21:34.40:0,34,233	0/0:39,1:17:17.01:0,17,165	0/0:32,1:34:56.76:0,57,1150	1/1:17,0:17:26.48:107,26,0	1/1:2,10:11:24.01:244,24,0	0/0:32,0:32:69.09:0,69,896	1/1:11,1:12:16.40:86,16,0	0/0:25,0:27:65.79:0,66,900	0/0:16,0:16:36.12:0,36,537	1/1:15,0:15:21.43:88,21,0	1/1:6,9:15:23.76:291,24,0	0/1:6,6:12:33.09:159,0,33	0/0:11,0:12:32.56:0,33,379	0/0:20,0:20:47.61:0,48,623	0/0:24,0:25:72.20:0,72,988	0/0:20,0:20:48.13:0,48,672	0/0:25,0:29:63.56:0,64,831	0/0:25,0:28:77.69:0,78,1067	0/0:13,0:13:24.07:0,24,326	1/1:9,12:22:32.71:374,33,0	0/1:28,1:30:57.06:76,0,57	1/1:13,0:14:10.55:44,11,0	0/0:22,0:22:55.19:0,55,710	0/0:30,0:32:72.39:0,72,921	0/0:29,0:30:83.63:0,84,1080	0/0:10,0:15:17.54:0,18,216
chr10	81638234	.	TTTTTTTTTTTCC	T	3503.50	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=6.516;DP=661;FS=0.510;HRun=0;HaplotypeScore=242.5482;InbreedingCoeff=0.8384;MQ=68.31;MQ0=11;MQRankSum=-7.148;QD=24.67;ReadPosRankSum=3.377;VQSLOD=2.5059;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:3.01:0,3,2587	0/0:14,0:14:33.10:0,33,1076	0/1:54,0:19:12.85:13,0,209	0/0:46,0:18:17.70:0,18,229	0/0:34,0:34:88.14:0,88,3758	1/1:2,15:17:26.76:905,27,0	0/0:13,0:12:20.07:0,20,860	0/0:30,0:30:67.55:0,68,1707	1/1:2,10:12:17.09:509,17,0	0/0:28,0:28:72.22:0,72,2673	0/0:17,0:17:42.61:0,43,2094	1/1:1,15:16:24.08:805,24,0	0/0:20,0:19:24.41:0,24,1223	0/0:14,0:14:23.15:0,23,951	0/0:12,0:12:33.11:0,33,1610	0/0:21,0:21:48.16:0,48,2320	0/0:25,0:25:69.19:0,69,3470	0/0:19,0:19:48.14:0,48,1971	0/0:29,0:29:67.44:0,67,2731	0/0:27,0:27:78.25:0,78,3478	0/0:12,0:12:24.06:0,24,978	0/0:25,0:25:21.92:0,22,1607	1/1:10,19:29:16.52:890,17,0	1/1:4,10:14:12.03:381,12,0	0/0:22,0:22:31.88:0,32,2280	0/0:30,0:30:75.18:0,75,3128	0/0:30,0:29:57.93:0,58,3319	0/0:15,0:15:18.06:0,18,660
chr10	81638244	.	TCC	T	654.54	PASS	AB=0.988;AC=11;AF=0.196;AN=56;BaseQRankSum=9.750;DP=652;FS=0.000;HRun=2;HaplotypeScore=135.6373;InbreedingCoeff=0.6783;MQ=65.73;MQ0=14;MQRankSum=-7.532;QD=3.83;ReadPosRankSum=4.096;VQSLOD=-0.5162;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:84.27:0,84,730	0/0:11,0:11:32.90:0,33,470	0/1:67,0:23:9.64:10,0,218	0/0:47,0:15:11.19:0,11,159	0/0:33,0:33:71.82:0,72,1303	1/1:16,1:17:29.95:260,30,0	0/0:14,0:13:27.07:0,27,200	0/0:30,1:31:31.62:0,32,490	1/1:12,0:12:10.74:111,11,0	0/0:28,0:28:83.46:0,83,1152	0/0:17,0:17:45.11:0,45,633	1/1:16,0:16:23.94:189,24,0	0/0:17,0:16:25.50:0,26,186	0/0:14,0:14:29.78:0,30,206	0/0:13,0:13:39.06:0,39,540	0/0:21,1:22:57.19:0,57,842	0/0:26,0:26:73.33:0,73,1066	0/0:21,0:20:54.02:0,54,775	0/0:28,0:27:75.14:0,75,1071	0/0:29,0:29:84.26:0,84,1190	0/0:8,0:8:24.08:0,24,364	0/1:20,0:20:2.36:2,0,150	0/1:25,1:26:93.12:144,0,93	1/1:13,0:13:14.70:103,15,0	0/0:22,0:22:61.61:0,62,787	0/0:26,0:26:74.99:0,75,1020	0/0:29,0:28:87.20:0,87,1198	0/0:8,0:8:18.05:0,18,233
chr10	81638246	.	C	CT	510	PASS	AB=0.979;AC=5;AF=0.089;AN=56;BaseQRankSum=-0.464;DP=666;FS=2.442;HRun=9;HaplotypeScore=132.0629;InbreedingCoeff=0.3614;MQ=65.10;MQ0=16;MQRankSum=-2.499;QD=4.43;ReadPosRankSum=-4.673;VQSLOD=-0.1314;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:76.19:0,76,559	0/0:11,0:11:19.60:0,20,146	0/0:65,0:23:22.77:0,23,116	0/1:49,0:17:14.78:15,0,17	0/0:33,0:33:75.12:0,75,629	0/1:18,0:18:9.94:10,0,36	0/0:16,0:14:29.88:0,30,239	1/1:12,21:33:52.92:594,53,0	0/0:14,0:14:10.37:0,10,32	0/0:28,0:28:62.76:0,63,530	0/0:17,0:18:43.91:0,44,359	0/0:16,0:16:16.85:0,17,52	0/0:17,0:16:33.05:0,33,242	0/0:13,0:14:24.75:0,25,193	0/0:13,0:13:38.59:0,39,321	0/0:22,0:22:53.92:0,54,457	0/0:26,0:26:68.32:0,68,573	0/0:21,0:20:47.38:0,47,384	0/0:28,0:27:62.90:0,63,533	0/0:30,0:30:73.99:0,74,606	0/0:8,0:8:23.96:0,24,202	0/0:20,0:20:47.92:0,48,367	0/0:27,0:27:4.78:0,5,35	0/1:13,0:15:7.10:7,0,10	0/0:21,0:21:36.98:0,37,394	0/0:27,0:27:59.43:0,59,497	0/0:28,0:27:68.91:0,69,584	0/0:8,0:8:14.95:0,15,123
chr10	81638257	.	C	CTTTT	1636.40	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=2.325;DP=642;FS=4.997;HRun=10;HaplotypeScore=152.1053;InbreedingCoeff=0.8503;MQ=58.47;MQ0=18;MQRankSum=-6.366;QD=14.48;ReadPosRankSum=-1.416;VQSLOD=0.3443;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,1:35:40.69:557,41,0	0/0:8,0:9:13.23:0,13,172	0/0:51,0:13:19.77:0,20,192	0/0:42,0:12:14:0,14,153	0/0:27,0:29:41.16:0,41,594	0/0:20,0:20:34.68:0,35,494	1/1:9,8:17:21.03:373,21,0	0/0:23,0:28:11.02:0,11,114	0/0:15,0:15:18.02:0,18,247	0/0:27,0:27:47.93:0,48,674	0/0:21,0:21:3.64:0,4,350	0/0:17,0:17:27.09:0,27,369	1/1:7,6:17:21.14:343,21,0	1/1:9,5:16:6.49:142,6,0	0/0:16,0:15:29.94:0,30,402	0/0:21,0:22:48.05:0,48,658	0/0:28,0:29:63:0,63,872	0/0:18,0:19:37.27:0,37,509	0/0:24,0:23:40.15:0,40,498	0/0:29,0:28:44.91:0,45,635	0/0:8,0:8:18.01:0,18,253	1/1:14,7:23:23.99:388,24,0	0/0:26,0:26:27.24:0,27,362	0/0:16,0:16:1.75:0,2,189	0/0:20,0:20:41.99:0,42,572	0/0:23,0:24:47.95:0,48,659	0/0:23,0:23:47.92:0,48,642	0/0:9,0:8:5.88:0,6,59
chr10	81638792	.	G	GAT	3202.20	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.131;DP=574;FS=8.606;HRun=0;HaplotypeScore=96.2172;InbreedingCoeff=0.9947;MQ=76.64;MQ0=0;MQRankSum=-13.728;QD=39.05;ReadPosRankSum=3.458;VQSLOD=5.2204;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.23:0,66,1077	0/0:11,0:11:33.11:0,33,538	0/0:18,0:18:51.15:0,51,768	0/0:13,0:13:33.58:0,34,500	0/0:29,0:29:84.27:0,84,1343	1/1:0,21:21:63.21:902,63,0	0/0:16,0:16:48.15:0,48,759	0/0:39,0:39:99:0,111,1790	1/1:2,15:17:48.11:704,48,0	0/0:23,0:23:69.24:0,69,1126	0/0:30,0:30:87.30:0,87,1417	1/1:0,25:25:75.25:1046,75,0	0/0:32,0:32:93.30:0,93,1486	0/0:28,0:28:84.27:0,84,1344	0/0:30,0:30:87.30:0,87,1419	0/0:25,0:25:75.22:0,75,1174	0/0:9,0:9:27.09:0,27,440	0/0:21,0:21:63.22:0,63,1028	0/0:25,0:25:75.25:0,75,1198	0/0:24,0:24:72.20:0,72,1146	0/0:11,0:11:33.11:0,33,538	0/0:8,0:8:24.08:0,24,391	1/1:1,9:10:27.09:379,27,0	1/1:0,9:9:24.08:346,24,0	0/0:18,0:18:54.18:0,54,881	0/0:27,0:27:81.28:0,81,1309	0/0:28,0:28:84.29:0,84,1365	0/0:5,0:5:15.05:0,15,245
chr10	81638795	.	AC	A	1641.10	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.360;DP=573;FS=6.577;HRun=1;HaplotypeScore=90.6580;InbreedingCoeff=0.9948;MQ=74.12;MQ0=0;MQRankSum=-13.118;QD=19.77;ReadPosRankSum=3.635;VQSLOD=3.8517;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.22:0,69,1074	0/0:11,0:11:33.11:0,33,525	0/0:16,0:16:40.11:0,40,606	0/0:12,0:12:36.11:0,36,509	0/0:28,0:28:84.26:0,84,1315	1/1:0,21:21:62.82:504,63,0	0/0:15,0:15:45.15:0,45,718	0/0:40,0:40:99:0,117,1805	1/1:2,15:17:45.92:362,46,0	0/0:24,0:24:72.23:0,72,1124	0/0:31,0:31:87.28:0,87,1366	1/1:0,25:25:74.47:572,74,0	0/0:31,0:31:90.29:0,90,1413	0/0:28,0:28:84.27:0,84,1313	0/0:32,0:32:96.30:0,96,1480	0/0:24,0:24:72.25:0,72,1149	0/0:10,0:10:27.06:0,27,404	0/0:21,0:21:63.21:0,63,1004	0/0:24,0:24:72.20:0,72,1065	0/0:25,0:25:72.20:0,72,1112	0/0:11,0:11:33.11:0,33,527	0/0:8,0:8:24.08:0,24,377	1/1:0,9:11:26.91:208,27,0	1/1:0,9:9:24.83:170,25,0	0/0:18,0:18:54.18:0,54,862	0/0:25,0:25:75.26:0,75,1196	0/0:28,0:28:84.29:0,84,1330	0/0:5,0:5:15.05:0,15,239
chr10	81639026	.	T	TTAA	559.33	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-2.925;DP=449;FS=11.045;HRun=0;HaplotypeScore=67.9341;InbreedingCoeff=0.8204;MQ=59.94;MQ0=2;MQRankSum=0.749;QD=16.95;ReadPosRankSum=1.343;VQSLOD=2.3296;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:51.17:0,51,734	0/0:5,0:5:12.04:0,12,170	0/0:8,0:3:3:0,3,49	0/0:7,0:3:6:0,6,84	0/0:41,0:41:87.29:0,87,1249	0/0:29,0:29:66.13:0,66,903	1/1:8,0:8:9.03:147,9,0	0/0:36,0:36:69.19:0,69,912	0/0:20,0:20:39.10:0,39,518	0/0:22,0:22:54.18:0,54,777	0/0:20,0:20:51.16:0,51,712	0/0:16,0:16:42.10:0,42,548	1/1:4,7:11:12.04:245,12,0	1/1:2,5:7:12.04:245,12,0	0/0:13,0:13:36.12:0,36,518	0/0:12,0:12:30.09:0,30,415	0/0:19,0:19:48.16:0,48,690	0/0:17,0:17:36.12:0,36,515	0/0:8,0:8:21.04:0,21,275	0/0:21,0:21:48.15:0,48,675	0/0:6,0:6:12.04:0,12,173	1/1:6,1:7:3.01:61,3,0	0/0:20,0:20:42.14:0,42,603	0/0:8,0:8:18.02:0,18,236	0/0:24,0:24:57.19:0,57,820	0/0:15,0:14:42.14:0,42,604	0/0:16,0:16:45.10:0,45,605	0/0:7,0:7:21.07:0,21,302
chr10	81640202	.	G	GT	3079.91	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.281;DP=624;FS=5.643;HRun=9;HaplotypeScore=72.2121;InbreedingCoeff=0.9836;MQ=72.15;MQ0=0;MQRankSum=-1.166;QD=24.25;ReadPosRankSum=1.917;VQSLOD=4.6031;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:17:12.89:353,13,0	0/0:11,0:11:29.99:0,30,260	0/0:13,0:14:14.62:0,15,225	0/0:8,0:7:12:0,12,104	0/0:37,0:37:92.94:0,93,802	1/1:2,21:24:56.99:612,57,0	0/0:19,0:19:47.98:0,48,417	0/0:36,0:36:47.81:0,48,634	1/1:3,18:21:51.14:564,51,0	0/0:22,0:23:50.01:0,50,421	0/0:27,0:27:71.96:0,72,621	1/1:5,20:25:51.14:564,51,0	0/0:28,0:28:77.95:0,78,672	0/0:26,0:26:74.97:0,75,651	0/0:23,0:23:65.98:0,66,570	0/0:27,1:28:41.77:0,42,584	0/0:21,0:21:53.94:0,54,462	0/0:15,0:15:38.99:0,39,338	0/0:17,0:17:35.98:0,36,312	0/0:39,0:39:99:0,108,937	0/0:10,0:10:23.98:0,24,205	0/0:17,0:17:41.98:0,42,362	1/1:1,21:23:59.99:643,60,0	1/1:1,15:17:48.13:530,48,0	0/0:30,0:30:86.95:0,87,749	0/0:29,0:29:77.98:0,78,677	0/0:32,0:32:86.96:0,87,752	0/0:7,0:7:21:0,21,182
chr10	81640688	.	TTCACG	T	965.09	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.539;DP=727;FS=8.580;HRun=0;HaplotypeScore=149.9250;InbreedingCoeff=0.9959;MQ=87.99;MQ0=0;MQRankSum=-6.963;QD=45.96;ReadPosRankSum=0.035;VQSLOD=3.6474;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:51.17:1060,51,0	0/0:14,0:14:39.13:0,39,1214	0/0:24,0:24:69.21:0,69,1934	0/0:28,0:28:72.25:0,72,2141	0/0:37,0:37:99:0,108,3327	0/0:32,0:32:96.33:0,96,2903	0/0:35,0:35:99:0,102,3093	0/0:29,0:29:81.26:0,81,2246	0/0:29,0:29:81.26:0,81,2422	0/0:23,0:23:60.21:0,60,1830	0/0:21,0:21:60.21:0,60,1858	0/0:24,0:24:66.23:0,66,2063	0/0:29,0:29:81.28:0,81,2520	0/0:27,0:27:78.27:0,78,2437	0/0:33,0:33:99:0,99,2976	0/0:22,0:22:63.22:0,63,1912	0/0:31,0:31:93.32:0,93,2880	0/0:18,0:18:54.19:0,54,1594	0/0:19,0:19:57.20:0,57,1696	0/0:22,0:22:63.22:0,63,1967	0/0:24,0:24:66.23:0,66,2038	0/0:32,0:32:90.29:0,90,2636	0/0:26,0:26:75.26:0,75,2338	0/0:23,0:23:66.20:0,66,1947	0/0:33,0:32:96.33:0,96,2993	0/0:28,0:28:81.28:0,81,2391	0/0:36,0:36:99:0,99,3011	0/0:7,0:7:21.07:0,21,657
chr10	81642228	.	G	GA	17765.01	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-6.903;DP=535;FS=6.207;HRun=4;HaplotypeScore=45.2128;InbreedingCoeff=0.9642;MQ=68.37;MQ0=0;MQRankSum=-5.743;QD=35.67;ReadPosRankSum=4.110;VQSLOD=4.8992;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:12:30.10:410,30,0	0/0:12,0:12:36.09:0,36,400	0/0:16,0:16:30.04:0,30,320	0/0:9,0:8:16.17:0,16,141	1/1:1,35:36:99:1391,105,0	1/1:5,19:24:57.19:779,57,0	1/1:0,11:11:30.10:410,30,0	1/1:5,38:43:99:1513,114,0	1/1:2,11:13:21.07:287,21,0	1/1:0,15:15:45.15:615,45,0	1/1:0,26:26:75.16:980,75,0	1/1:0,16:16:39.13:532,39,0	1/1:1,14:15:39.13:533,39,0	1/1:2,14:16:36.12:492,36,0	1/1:2,20:22:48.16:656,48,0	1/1:1,13:14:39.13:533,39,0	1/1:4,21:25:54.13:715,54,0	1/1:0,17:17:48.16:654,48,0	1/1:1,18:19:54.16:710,54,0	1/1:0,37:37:99:1510,111,0	1/1:1,3:4:9.03:123,9,0	1/1:2,8:10:24.08:319,24,0	1/1:1,23:24:63.21:861,63,0	1/1:1,5:6:15.05:205,15,0	1/1:1,27:28:78.26:1067,78,0	1/1:0,27:27:81.23:1073,81,0	1/1:2,30:32:84.28:1148,84,0	1/1:0,6:6:18.06:246,18,0
chr10	81642901	.	TAC	T	1167.57	PASS	AB=0.847;AC=10;AF=0.192;AN=52;BaseQRankSum=-1.925;DP=732;FS=5.105;HRun=0;HaplotypeScore=150.1588;InbreedingCoeff=0.6057;MQ=53.39;MQ0=16;MQRankSum=2.191;QD=9.05;ReadPosRankSum=2.738;VQSLOD=3.1972;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:26.58:0,27,260	1/1:4,6:10:14.91:148,15,0	./.	./.	0/0:17,0:23:8.25:0,8,85	0/0:14,0:21:18.03:0,18,213	1/1:8,10:21:32.59:308,33,0	0/0:21,0:21:13.24:0,13,135	0/0:14,0:27:32.70:0,33,305	0/0:23,0:31:35.69:0,36,321	0/0:10,0:17:4.92:0,5,23	0/1:14,1:24:3.27:3,0,221	1/1:13,11:25:0.86:240,1,0	1/1:10,17:26:35.65:385,36,0	0/0:23,0:40:14.75:0,15,114	0/0:22,0:35:19.55:0,20,140	0/0:16,0:16:4.16:0,4,20	0/0:7,0:15:14.99:0,15,141	0/0:11,0:11:12.96:0,13,135	0/0:16,0:24:21.99:0,22,88	0/0:47,0:47:30.12:0,30,258	0/1:14,8:22:17.29:231,0,17	0/0:18,0:22:24.52:0,25,299	0/0:29,0:40:41.91:0,42,438	0/0:17,0:31:22.05:0,22,150	0/0:19,0:24:37.07:0,37,351	0/0:23,0:28:18.35:0,18,134	0/0:2,0:2:2.04:0,2,6
chr10	81643321	.	TG	T	12667.18	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-3.486;DP=572;FS=23.105;HRun=8;HaplotypeScore=73.6403;InbreedingCoeff=0.9927;MQ=78.47;MQ0=0;MQRankSum=-5.949;QD=24.45;ReadPosRankSum=6.273;VQSLOD=3.3492;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:34:81.13:782,81,0	0/0:12,0:12:27.07:0,27,313	0/0:23,0:23:48.08:0,48,522	0/0:19,0:17:29.37:0,29,306	1/1:2,24:26:62.98:587,63,0	1/1:0,20:20:51.08:492,51,0	1/1:3,15:18:42.07:406,42,0	1/1:4,20:24:56.98:519,57,0	1/1:1,22:23:63.10:608,63,0	1/1:1,21:22:60.09:579,60,0	1/1:0,17:17:48.08:463,48,0	1/1:1,21:22:57.09:550,57,0	1/1:1,21:22:54.09:521,54,0	1/1:0,24:24:69.11:666,69,0	1/1:0,19:19:48.08:464,48,0	1/1:0,26:26:66.11:637,66,0	1/1:0,22:22:66.11:637,66,0	1/1:2,17:19:42.07:406,42,0	1/1:1,12:13:36.03:340,36,0	1/1:2,10:12:24.03:232,24,0	1/1:2,20:22:51.08:493,51,0	1/1:3,10:13:30:280,30,0	1/1:1,18:19:42.07:406,42,0	1/1:0,29:29:75.12:724,75,0	1/1:0,25:25:72.12:695,72,0	1/1:1,17:18:51.08:493,51,0	1/1:2,21:23:57.50:541,58,0	1/1:1,5:6:15.02:145,15,0
chr10	81645066	.	GCA	G	1322.50	PASS	AB=0.890;AC=10;AF=0.179;AN=56;BaseQRankSum=-5.304;DP=712;FS=1.767;HRun=0;HaplotypeScore=204.7625;InbreedingCoeff=-0.0189;MQ=49.98;MQ0=4;MQRankSum=-0.183;QD=5.42;ReadPosRankSum=-2.726;VQSLOD=2.8988;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:48,1:49:29.92:38,0,30	0/0:12,0:12:24.08:0,24,386	0/0:55,0:29:47.64:0,48,704	0/0:40,0:29:15.84:0,16,541	0/0:15,2:17:12.92:0,13,51	0/0:21,0:21:17.52:0,18,149	0/0:24,0:24:15.48:0,15,152	0/1:33,6:38:99:360,0,263	0/0:15,0:15:12.49:0,12,143	0/1:12,19:31:82.46:479,0,82	0/1:16,2:18:2.02:2,0,49	0/1:30,0:31:1.12:1,0,79	0/0:23,0:23:9.90:0,10,59	0/0:19,0:19:14.33:0,14,125	0/0:17,3:20:15.52:0,16,60	0/0:28,0:28:17.87:0,18,66	0/1:18,1:19:19.28:19,0,21	0/0:18,0:18:20.06:0,20,140	0/1:14,1:14:58.27:90,0,58	0/0:30,3:33:5.52:0,6,73	0/0:21,0:21:4.78:0,5,18	0/0:23,0:22:2.99:0,3,64	0/0:24,0:23:14.05:0,14,120	0/0:37,0:36:11.16:0,11,99	0/0:33,1:34:2.29:0,2,67	1/1:10,15:25:14.07:416,14,0	0/1:15,2:17:23.73:52,0,24	0/0:4,0:4:7.49:0,7,27
chr10	81645068	.	A	ACACACACACACG	16836.39	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=-3.325;DP=766;FS=3.790;HRun=0;HaplotypeScore=250.9307;InbreedingCoeff=0.1111;MQ=51.16;MQ0=4;MQRankSum=-6.718;QD=25.51;ReadPosRankSum=7.734;VQSLOD=2.8856;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:52:26.12:650,26,0	0/0:10,0:10:24.08:0,24,743	0/0:57,0:31:57.11:0,57,963	0/0:39,0:29:24.04:0,24,830	1/1:3,11:20:17.79:983,18,0	0/1:21,0:21:24.40:298,0,24	0/1:24,0:24:17.80:18,0,21	0/1:39,0:38:46.07:488,0,46	0/1:15,0:15:14.02:14,0,47	1/1:27,2:30:59.36:1158,59,0	1/1:6,12:23:15.01:836,15,0	0/1:30,0:30:32.62:131,0,33	0/1:23,0:23:11.38:11,0,58	0/1:21,0:21:32.87:33,0,53	1/1:6,14:24:18.01:967,18,0	1/1:4,25:31:21.54:1255,22,0	1/1:5,14:24:6.29:1058,6,0	1/1:9,8:19:4.12:1139,4,0	1/1:5,9:16:20.74:1272,21,0	1/1:12,19:35:30.06:1728,30,0	1/1:14,9:35:9.03:481,9,0	0/1:23,0:22:58.41:129,0,58	0/1:24,0:23:34.23:203,0,34	0/1:37,0:36:4.17:240,0,4	1/1:8,28:38:27.09:1607,27,0	1/1:23,1:25:50.28:817,50,0	1/1:4,12:22:17.78:781,18,0	1/1:1,5:8:9.03:537,9,0
chr10	81645506	.	CG	C	5479.98	PASS	AB=0.889;AC=41;AF=0.732;AN=56;BaseQRankSum=-4.836;DP=474;FS=10.392;HRun=10;HaplotypeScore=61.8582;InbreedingCoeff=0.6455;MQ=67.92;MQ0=0;MQRankSum=-1.267;QD=13.91;ReadPosRankSum=5.813;VQSLOD=3.8631;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,14:20:19.39:315,19,0	0/1:8,0:8:7.95:8,0,140	0/0:14,0:14:24:0,24,242	0/1:12,0:12:1.80:2,0,169	1/1:9,11:20:2.81:253,3,0	1/1:14,18:32:47.48:408,47,0	0/0:6,0:11:11.65:0,12,70	0/0:11,0:16:11.74:0,12,55	1/1:4,14:18:41.99:364,42,0	1/1:11,14:26:52.78:447,53,0	1/1:7,8:15:17.98:156,18,0	1/1:5,12:17:29.97:260,30,0	0/0:10,0:19:8.62:0,9,44	0/0:14,0:15:17.75:0,18,127	1/1:5,22:27:62.97:547,63,0	1/1:6,12:17:32.99:286,33,0	1/1:8,6:14:20.98:181,21,0	1/1:5,17:22:38.97:338,39,0	0/1:9,8:18:34.35:181,0,34	1/1:7,9:16:11.95:104,12,0	1/1:3,12:15:26.99:234,27,0	0/0:4,0:3:5.84:0,6,39	1/1:7,12:19:32.98:286,33,0	1/1:4,11:15:20.98:182,21,0	1/1:8,6:14:17.97:156,18,0	1/1:9,10:19:2.79:253,3,0	1/1:7,20:27:56.97:492,57,0	1/1:2,0:2:3:26,3,0
chr10	81646106	.	T	TA	805.40	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.580;DP=711;FS=4.980;HRun=8;HaplotypeScore=71.9750;InbreedingCoeff=0.9036;MQ=75.67;MQ0=0;MQRankSum=-3.405;QD=23.01;ReadPosRankSum=0.781;VQSLOD=4.3299;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,31:35:78.23:900,78,0	0/0:10,0:10:26.99:0,27,243	0/0:16,0:16:42.01:0,42,381	0/0:15,0:16:34.83:0,35,306	0/0:34,0:34:93.04:0,93,851	0/0:28,0:28:75.04:0,75,686	0/0:19,0:19:54.02:0,54,494	0/0:25,0:25:56.99:0,57,517	0/0:22,0:22:60.03:0,60,549	0/0:27,0:27:78.03:0,78,712	0/0:42,0:42:99:0,111,1016	0/0:28,0:28:81:0,81,730	0/0:33,0:33:93.05:0,93,851	0/0:28,0:28:66.02:0,66,603	0/0:37,0:37:99:0,105,961	0/0:30,0:30:81.03:0,81,741	0/0:29,0:29:80.94:0,81,741	0/0:14,0:14:35.95:0,36,316	0/0:22,0:22:60.03:0,60,549	0/0:37,0:37:99:0,102,933	0/0:12,0:12:33.02:0,33,302	0/0:26,0:26:75.03:0,75,682	0/0:19,0:19:54.03:0,54,494	0/0:17,0:17:48.03:0,48,439	0/0:38,0:38:99:0,108,982	0/0:25,0:25:75.04:0,75,686	0/0:39,0:39:99:0,111,1016	0/0:3,0:3:6:0,6,55
chr10	81647095	.	CATAT	C	1942.30	PASS	AC=14;AF=0.269;AN=52;BaseQRankSum=1.691;DP=235;FS=6.779;HRun=0;HaplotypeScore=52.2697;InbreedingCoeff=0.6603;MQ=68.24;MQ0=8;MQRankSum=-2.811;QD=20.66;ReadPosRankSum=-2.837;VQSLOD=1.5573;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:9.03:0,9,209	0/0:1,0:1:3.01:0,3,76	1/1:12,0:6:0.08:1,0,0	0/0:28,0:10:4.87:0,5,19	0/0:8,0:8:18.06:0,18,265	1/1:2,16:18:18.06:311,18,0	0/0:1,0:1:3.01:0,3,76	1/1:16,30:47:99:1395,102,0	1/1:0,5:5:6.02:104,6,0	0/0:4,0:4:11.83:0,12,152	0/0:2,0:2:6.02:0,6,93	1/1:1,5:6:12.04:188,12,0	0/0:6,0:6:15.05:0,15,323	0/0:7,0:7:18.06:0,18,441	0/0:2,0:2:3.01:0,3,43	0/0:3,0:2:6.02:0,6,87	0/0:22,0:22:51.17:0,51,730	0/0:16,0:15:33.09:0,33,443	0/0:8,0:8:21.06:0,21,320	./.	0/0:5,0:5:6.02:0,6,87	./.	1/1:1,0:1:3.01:47,3,0	1/1:1,3:4:3.01:52,3,0	0/0:7,0:7:18.06:0,18,270	0/0:5,0:5:12.04:0,12,182	0/0:5,0:5:15.05:0,15,231	0/0:6,0:6:12.04:0,12,158
chr10	81649522	.	AG	A	1034.56	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.612;DP=686;FS=6.008;HRun=2;HaplotypeScore=65.4493;InbreedingCoeff=0.8478;MQ=89.69;MQ0=0;MQRankSum=-4.339;QD=33.37;ReadPosRankSum=2.902;VQSLOD=3.6865;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:87.28:1129,87,0	0/0:7,0:7:21.07:0,21,315	0/0:27,0:27:74.05:0,74,1040	0/0:25,0:25:67.44:0,67,889	0/0:28,0:28:84.28:0,84,1259	0/0:36,0:36:99:0,108,1599	0/0:26,0:26:78.26:0,78,1162	0/0:35,0:35:99:0,102,1475	0/0:24,0:24:72.24:0,72,1079	0/0:33,0:33:96.32:0,96,1419	0/0:18,0:18:54.18:0,54,809	0/0:25,0:25:75.23:0,75,1074	0/0:24,0:24:72.16:0,72,1050	0/0:26,0:26:75.24:0,75,1103	0/0:42,0:42:99:0,126,1845	0/0:26,0:26:78.25:0,78,1150	0/0:20,0:20:60.19:0,60,880	0/0:12,0:12:33.10:0,33,475	0/0:22,0:22:63.19:0,63,899	0/0:22,0:22:66.21:0,66,960	0/0:32,0:32:93.32:0,93,1394	0/0:29,0:29:87.28:0,87,1274	0/0:19,0:19:54.17:0,54,787	0/0:22,0:22:63.21:0,63,940	0/0:23,0:23:69.23:0,69,1034	0/0:17,0:17:51.17:0,51,764	0/0:34,0:33:99:0,102,1485	0/0:1,0:1:3.01:0,3,45
chr10	81649875	.	TTGTGTG	T	3845.03	PASS	AB=0.640;AC=31;AF=0.554;AN=56;BaseQRankSum=0.957;DP=464;FS=23.605;HRun=0;HaplotypeScore=109.7248;InbreedingCoeff=0.7135;MQ=64.35;MQ0=11;MQRankSum=0.462;QD=14.68;ReadPosRankSum=0.344;VQSLOD=0.8620;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:11.94:90,12,0	0/0:4,0:4:3:0,3,73	0/0:21,0:11:5.98:0,6,96	0/0:26,0:18:12.04:0,12,261	1/1:11,10:21:5.20:40,5,0	0/0:20,0:19:42.14:0,42,1113	0/0:14,0:13:15.03:0,15,391	1/1:13,0:19:15.63:204,16,0	0/0:17,0:15:26.99:0,27,576	1/1:7,10:18:30.07:503,30,0	1/1:17,0:16:2.76:52,3,0	0/0:18,0:17:27.08:0,27,607	0/0:17,0:17:24.08:0,24,572	0/0:20,0:20:27.56:0,28,642	1/1:19,0:26:31.17:946,31,0	1/1:8,10:20:21.07:367,21,0	1/1:6,9:17:3.01:63,3,0	1/1:11,0:11:9.65:240,10,0	0/1:7,9:16:51.18:361,0,51	1/1:3,8:11:3.01:63,3,0	1/1:17,0:18:26.81:450,27,0	0/0:17,0:17:21.54:0,22,558	0/0:16,0:15:21.51:0,22,402	0/0:12,0:12:18.06:0,18,529	1/1:13,1:14:5.38:70,5,0	1/1:12,0:13:15.05:281,15,0	1/1:7,11:18:3.48:53,3,0	1/1:4,3:6:3.01:62,3,0
chr10	81649900	.	TGTGTGTGAGA	T	2872.61	PASS	AB=0.951;AC=15;AF=0.268;AN=56;BaseQRankSum=1.734;DP=479;FS=3.734;HRun=0;HaplotypeScore=150.4521;InbreedingCoeff=-0.3914;MQ=53.59;MQ0=12;MQRankSum=2.056;QD=10.26;ReadPosRankSum=-0.089;VQSLOD=2.7195;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:33.47:33,0,40	0/0:3,0:3:3.48:0,3,74	0/0:7,0:2:5.98:0,6,96	0/0:12,0:6:8.52:0,9,256	0/0:25,0:26:27.87:0,28,527	0/0:19,0:18:48.16:0,48,1459	0/1:13,0:12:99:110,0,401	0/1:20,0:20:99:179,0,120	0/0:18,0:15:36.02:0,36,902	0/1:19,0:19:99:505,0,220	0/1:11,15:25:79.53:80,0,286	0/0:15,0:14:36.11:0,36,919	0/1:15,0:15:79.60:80,0,662	0/0:19,0:19:39.58:0,40,862	0/1:28,0:28:99:641,0,242	0/1:18,0:19:94.78:182,0,95	0/0:23,0:23:21.01:0,21,315	0/1:14,0:14:99:174,0,232	0/1:15,0:14:99:352,0,194	0/1:13,0:13:34.59:35,0,76	0/1:19,0:19:99:379,0,203	0/0:16,0:16:21.54:0,22,568	0/0:19,0:18:39.58:0,40,893	0/0:15,0:15:30.99:0,31,1025	0/1:20,0:20:19.23:19,0,516	0/1:11,0:21:99:224,0,358	0/1:23,0:22:35.44:35,0,131	0/0:7,0:6:8.86:0,9,89
chr10	81649902	.	TGTGTGAGAGA	T	1431.91	PASS	AB=0.983;AC=15;AF=0.268;AN=56;BaseQRankSum=5.769;DP=485;FS=5.007;HRun=0;HaplotypeScore=155.7313;InbreedingCoeff=-0.3841;MQ=52.17;MQ0=12;MQRankSum=2.089;QD=5.11;ReadPosRankSum=-0.505;VQSLOD=2.4497;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:86.12:99,0,86	0/0:3,0:3:3.90:0,4,51	0/0:8,0:2:3.01:0,3,50	0/0:12,0:6:17.99:0,18,249	0/0:26,0:27:29.76:0,30,757	0/0:20,0:19:48.16:0,48,1402	0/1:13,0:12:36.40:36,0,337	0/1:20,0:20:91.34:91,0,247	0/0:19,0:16:28.67:0,29,901	0/1:19,0:19:99:296,0,348	0/1:26,0:25:62.06:62,0,419	0/0:18,0:17:38.72:0,39,1001	0/1:15,0:15:53.52:54,0,572	0/0:18,0:18:39.56:0,40,750	0/1:26,0:26:99:295,0,489	0/1:19,0:19:78.76:79,0,241	0/0:23,0:23:21.58:0,22,475	0/1:13,0:13:80.76:81,0,385	0/1:17,0:16:99:170,0,260	0/1:13,0:13:8.75:9,0,143	0/1:17,0:17:99:173,0,382	0/0:15,0:15:21.07:0,21,402	0/0:20,0:19:36.07:0,36,932	0/0:15,0:15:30.99:0,31,1074	0/1:13,7:20:36.65:37,0,785	0/1:24,0:24:92.52:93,0,867	0/1:22,0:22:12.26:12,0,250	0/0:7,0:6:12.01:0,12,170
chr10	81650340	.	CAAA	C	532.43	PASS	AB=0.885;AC=8;AF=0.143;AN=56;BaseQRankSum=1.001;DP=389;FS=3.721;HRun=6;HaplotypeScore=108.6470;InbreedingCoeff=0.6111;MQ=64.51;MQ0=11;MQRankSum=-3.239;QD=10.44;ReadPosRankSum=-0.252;VQSLOD=-0.3438;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:18:8.15:0,8,209	0/0:5,0:5:12.04:0,12,206	0/0:23,0:9:24.93:0,25,391	0/0:29,1:11:20.71:0,21,177	0/0:18,0:17:33.93:0,34,421	0/0:17,0:17:36.42:0,36,397	1/1:8,0:8:14.96:153,15,0	0/1:19,1:19:38.86:39,0,47	0/0:10,0:10:23.89:0,24,204	0/0:11,0:11:26.13:0,26,286	0/0:12,0:12:21.32:0,21,224	0/0:10,0:10:24:0,24,314	1/1:7,4:10:19.47:279,19,0	0/1:7,2:9:11.17:187,0,11	0/0:11,0:11:30.50:0,31,319	0/0:13,0:13:28.19:0,28,347	0/0:15,0:14:31.77:0,32,248	0/0:13,0:12:21.01:0,21,277	0/0:19,0:19:48.04:0,48,629	0/0:20,0:20:43.09:0,43,505	0/0:9,0:7:9.01:0,9,88	1/1:3,0:2:2.90:16,3,0	0/0:16,0:16:27.75:0,28,311	0/0:10,0:10:17.36:0,17,264	0/0:9,0:9:21.01:0,21,225	0/0:13,0:13:34.39:0,34,392	0/0:20,0:19:51.25:0,51,564	0/0:15,0:15:39.42:0,39,444
chr10	81650342	.	A	AAC	1168.54	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-2.353;DP=416;FS=9.434;HRun=0;HaplotypeScore=122.5850;InbreedingCoeff=0.7840;MQ=62.12;MQ0=18;MQRankSum=-1.111;QD=18.85;ReadPosRankSum=1.829;VQSLOD=3.8594;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:39.62:0,40,406	0/0:5,0:5:11.99:0,12,137	0/0:24,0:10:24.93:0,25,323	0/0:33,0:11:17.38:0,17,153	0/0:17,0:16:38.32:0,38,403	0/0:18,0:18:38.95:0,39,478	1/1:12,0:12:13.67:128,14,0	1/1:3,17:19:52.93:972,53,0	0/0:10,0:10:28.22:0,28,261	0/0:12,0:10:25.95:0,26,341	0/0:11,0:11:24.40:0,24,267	0/0:10,0:10:23.23:0,23,280	1/1:14,0:13:16.37:118,16,0	0/1:11,0:11:11.87:73,0,12	0/0:11,0:11:32.38:0,32,367	0/0:13,0:13:31.77:0,32,382	0/0:15,0:14:32.41:0,32,322	0/0:13,0:12:23.82:0,24,240	0/0:21,0:20:50.51:0,51,671	0/0:21,0:21:52.13:0,52,577	0/0:9,0:7:9.02:0,9,118	1/1:5,0:4:2.62:30,3,0	0/0:18,0:17:33.82:0,34,388	0/0:10,0:10:13.95:0,14,194	0/0:12,0:11:19.74:0,20,251	0/0:17,0:16:32.59:0,33,414	0/0:20,0:19:53.80:0,54,661	0/0:17,0:15:38.68:0,39,530
chr10	81650349	.	AAAAAC	A	2140.06	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=-3.236;DP=471;FS=39.363;HRun=0;HaplotypeScore=133.5835;InbreedingCoeff=0.0493;MQ=46.92;MQ0=45;MQRankSum=1.541;QD=5.25;ReadPosRankSum=0.037;VQSLOD=1.0728;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:16:33.54:34,0,85	0/0:6,0:5:11.90:0,12,159	0/0:28,0:7:13.39:0,13,78	0/1:36,0:6:1.56:2,0,2	0/1:25,0:23:57.37:57,0,62	0/1:20,0:19:41.64:146,0,42	1/1:9,0:9:7.78:37,8,0	0/0:20,0:19:41.45:0,41,268	0/1:11,0:10:23.95:79,0,24	1/1:22,0:14:26.45:178,26,0	0/1:12,0:11:6.39:62,0,6	0/1:10,0:10:27.69:66,0,28	1/1:12,3:13:25.02:237,25,0	1/1:11,1:12:12.42:145,12,0	1/1:14,0:13:9.58:108,10,0	0/1:12,0:11:7.54:41,0,8	0/1:16,0:15:10.45:42,0,10	0/1:12,0:11:22.21:41,0,22	1/1:30,0:22:5.47:164,5,0	0/1:20,0:20:50.09:112,0,50	1/1:9,0:6:5.96:45,6,0	1/1:7,0:5:6.59:25,7,0	0/1:18,0:17:81.47:96,0,81	0/0:9,0:9:10.92:0,11,107	1/1:16,0:15:7.89:104,8,0	1/1:24,0:19:10.09:139,10,0	1/1:21,0:18:22.75:157,23,0	1/1:18,0:16:13.74:195,14,0
chr10	81650352	.	AAC	A	5220.07	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-2.172;DP=498;FS=9.518;HRun=0;HaplotypeScore=109.7696;InbreedingCoeff=0.7632;MQ=45.02;MQ0=55;MQRankSum=0.512;QD=12.58;ReadPosRankSum=1.080;VQSLOD=4.2740;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:17:15.72:0,16,107	0/0:6,0:5:2.44:0,2,60	0/0:34,0:6:12.84:0,13,75	0/1:44,0:7:1.69:2,0,2	1/1:26,0:24:43.99:255,44,0	1/1:21,0:19:41.02:323,41,0	1/1:9,0:9:6.78:56,7,0	0/0:23,0:21:37.38:0,37,306	1/1:13,0:12:24.98:189,25,0	1/1:23,0:13:21.28:189,21,0	1/1:12,0:10:20.77:161,21,0	1/1:10,0:10:10.57:141,11,0	1/1:15,0:13:28.21:226,28,0	1/1:13,0:13:31.20:206,31,0	1/1:14,0:13:28.13:189,28,0	1/1:11,0:10:20.95:193,21,0	1/1:17,0:16:20.19:198,20,0	1/1:14,0:13:1.58:139,2,0	1/1:27,0:18:14.36:287,14,0	1/1:16,4:20:53.89:457,54,0	1/1:9,0:6:13.47:91,13,0	1/1:9,0:7:15.23:94,15,0	1/1:18,1:17:26.20:300,26,0	1/1:9,0:9:6.71:53,7,0	1/1:18,0:17:41.73:315,42,0	1/1:26,0:20:50.27:393,50,0	1/1:20,2:19:54.21:461,54,0	1/1:14,0:12:35.94:301,36,0
chr10	81650353	.	AC	A	5447.14	PASS	AB=0.961;AC=48;AF=0.857;AN=56;BaseQRankSum=-1.744;DP=505;FS=12.278;HRun=1;HaplotypeScore=107.0524;InbreedingCoeff=0.6853;MQ=43.81;MQ0=58;MQRankSum=0.467;QD=12.82;ReadPosRankSum=1.761;VQSLOD=2.6099;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:17:28.67:0,29,136	0/1:7,0:6:27.78:28,0,45	0/0:36,2:6:11.75:0,12,64	0/1:43,4:6:1.56:2,0,2	1/1:19,7:23:48.77:346,49,0	1/1:18,3:19:43.98:383,44,0	1/1:7,2:9:8.73:81,9,0	0/0:23,0:21:40.94:0,41,302	1/1:13,0:12:25.01:241,25,0	1/1:21,1:12:6.75:161,7,0	1/1:11,2:11:23.02:157,23,0	1/1:10,0:10:19.99:177,20,0	1/1:16,1:15:28.70:233,29,0	1/1:12,0:12:31.74:204,32,0	1/1:11,2:12:24.86:193,25,0	1/1:9,2:10:22.94:173,23,0	1/1:15,1:15:20.48:199,20,0	1/1:14,0:13:3.40:141,3,0	1/1:26,1:17:10.71:294,11,0	1/1:16,4:20:45.81:428,46,0	1/1:8,1:6:13.15:89,13,0	1/1:9,0:7:17.54:108,18,0	1/1:16,3:17:40.04:351,40,0	1/1:9,0:9:16.87:125,17,0	1/1:16,2:17:19.54:255,20,0	1/1:26,1:21:54.71:369,55,0	1/1:22,0:19:55.83:419,56,0	1/1:14,0:12:35.89:290,36,0
chr10	81650378	.	AC	A	1136.58	PASS	AB=0.978;AC=21;AF=0.375;AN=56;BaseQRankSum=-0.281;DP=619;FS=1.317;HRun=1;HaplotypeScore=138.5195;InbreedingCoeff=-0.3251;MQ=38.05;MQ0=71;MQRankSum=-2.197;QD=3.14;ReadPosRankSum=2.637;VQSLOD=0.2826;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:23.91:0,24,141	0/1:8,1:8:12.34:12,0,41	0/0:62,0:5:8.63:0,9,59	0/0:68,0:9:5.71:0,6,53	0/1:28,0:25:73.75:116,0,74	0/0:21,0:17:22.43:0,22,160	0/0:14,0:12:14.30:0,14,93	0/0:29,0:28:57.97:0,58,273	0/1:13,0:13:33.18:33,0,119	0/1:29,0:19:60.94:108,0,61	0/1:16,1:15:23.94:82,0,24	0/1:14,0:13:43.01:43,0,48	0/1:19,0:17:24.92:82,0,25	0/1:12,0:12:45.04:69,0,45	0/1:13,1:13:17.86:68,0,18	1/1:14,1:13:24.64:148,25,0	0/1:16,0:15:18.98:36,0,19	0/1:10,0:11:39.07:39,0,53	0/1:35,0:21:21.82:22,0,185	0/1:19,3:22:11.73:12,0,96	0/0:12,0:8:4.22:0,4,39	0/1:19,0:17:25.47:25,0,60	0/0:19,0:16:24.20:0,24,159	0/1:11,0:11:8.25:8,0,69	1/1:17,1:17:9.71:87,10,0	0/1:36,1:29:58.28:151,0,58	0/1:23,0:21:48.06:161,0,48	0/0:10,0:9:12.33:0,12,82
chr10	81650383	.	AC	A	676.87	PASS	AB=0.980;AC=21;AF=0.375;AN=56;BaseQRankSum=2.108;DP=573;FS=7.054;HRun=1;HaplotypeScore=135.6967;InbreedingCoeff=-0.4250;MQ=39.55;MQ0=52;MQRankSum=-1.514;QD=1.97;ReadPosRankSum=2.437;VQSLOD=-0.7399;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:7.53:8,0,98	0/1:7,1:7:6.98:7,0,95	0/0:62,1:5:9.03:0,9,114	0/0:65,1:9:10.77:0,11,49	0/1:24,1:23:50.96:51,0,186	0/0:18,0:15:15.33:0,15,293	0/0:12,2:12:1.22:0,1,170	0/0:31,0:30:61.75:0,62,530	0/1:12,0:12:19.18:19,0,262	0/1:25,0:18:39.86:77,0,40	0/1:15,0:14:27.01:38,0,27	0/1:14,1:14:42.10:42,0,173	0/1:14,0:13:89.37:89,0,91	0/1:13,0:13:70.31:70,0,123	0/1:12,1:12:59.31:73,0,59	1/1:11,0:10:10.49:86,10,0	0/1:14,0:13:22.12:22,0,57	0/1:9,0:9:5.08:5,0,109	0/1:32,0:25:1.68:2,0,370	0/1:23,0:23:9.44:9,0,246	0/1:11,0:8:7.81:8,0,64	0/1:17,0:16:8.18:8,0,144	0/0:19,0:16:36.56:0,37,371	0/0:9,0:9:12.78:0,13,153	0/1:15,1:15:24.44:24,0,42	0/1:29,0:27:95.45:95,0,138	0/1:21,0:19:97.68:98,0,145	0/0:10,0:9:20.60:0,21,136
chr10	81650385	.	AAAC	A	7147.65	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-2.356;DP=566;FS=0.000;HRun=0;HaplotypeScore=129.6528;InbreedingCoeff=0.5390;MQ=41.70;MQ0=43;MQRankSum=-0.692;QD=16.36;ReadPosRankSum=-1.604;VQSLOD=4.4423;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:25.37:265,25,0	0/1:8,0:7:1.53:2,0,178	0/0:63,0:6:8.04:0,8,83	0/0:66,0:9:12.93:0,13,69	1/1:23,2:23:56.27:474,56,0	1/1:18,0:15:17.36:100,17,0	1/1:12,1:11:17.79:143,18,0	1/1:30,0:30:57.54:575,58,0	0/1:12,0:12:10.16:69,0,10	1/1:16,6:18:37:403,37,0	1/1:12,3:14:22.76:261,23,0	0/1:16,0:15:23.26:68,0,23	1/1:15,0:15:28.38:173,28,0	1/1:15,0:15:35:225,35,0	1/1:11,1:12:28.96:314,29,0	1/1:11,0:10:20.75:170,21,0	1/1:14,1:14:26.70:324,27,0	1/1:8,1:9:15.34:154,15,0	1/1:13,20:26:71.76:751,72,0	1/1:12,13:25:56.69:634,57,0	1/1:9,2:8:14.91:153,15,0	1/1:9,6:15:26.84:215,27,0	1/1:18,0:15:24.77:113,25,0	1/1:9,0:9:7.58:44,8,0	1/1:11,3:14:20.93:312,21,0	1/1:23,5:26:64.74:594,65,0	1/1:16,3:18:44.74:433,45,0	1/1:8,2:9:18.80:180,19,0
chr10	81650388	.	CAACAAA	C	1804.77	PASS	AB=0.981;AC=21;AF=0.375;AN=56;BaseQRankSum=-1.274;DP=546;FS=1.450;HRun=0;HaplotypeScore=167.2299;InbreedingCoeff=-0.2676;MQ=44.35;MQ0=35;MQRankSum=-2.735;QD=5.66;ReadPosRankSum=-2.563;VQSLOD=2.4565;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:17:22.44:381,22,0	0/0:9,0:8:14.92:0,15,432	0/0:60,0:7:10.80:0,11,131	0/0:61,0:10:8.84:0,9,148	0/1:22,0:23:19.04:19,0,151	0/0:18,0:16:12.84:0,13,206	0/1:12,0:10:3.46:3,0,96	1/1:9,25:34:65.19:1142,65,0	0/0:11,0:11:21.63:0,22,233	0/0:22,0:20:2.19:0,2,89	0/1:13,0:14:4.98:5,0,66	0/1:13,0:13:7.65:8,0,230	0/1:14,0:14:28.73:29,0,69	0/1:15,0:15:35.91:63,0,36	0/0:11,0:12:5.11:0,5,90	0/1:10,0:9:13.64:33,0,14	0/1:11,0:14:42.68:47,0,43	0/1:7,0:8:25.64:26,0,27	0/1:31,0:27:87.61:88,0,149	0/1:21,0:22:10.14:10,0,225	0/1:9,0:8:4.08:4,0,41	0/0:13,0:13:19.54:0,20,134	0/0:16,0:15:10.49:0,10,167	0/1:8,0:8:5.01:5,0,77	0/1:12,0:13:8.66:9,0,68	0/1:24,0:24:30.03:30,0,156	0/1:19,0:19:41.75:42,0,109	0/1:10,0:9:23.89:24,0,58
chr10	81650389	.	AAC	A	7000.97	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-0.633;DP=543;FS=6.154;HRun=0;HaplotypeScore=120.8550;InbreedingCoeff=0.7917;MQ=44.63;MQ0=33;MQRankSum=0.365;QD=17.03;ReadPosRankSum=0.951;VQSLOD=4.8540;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:25.46:223,25,0	0/0:9,0:8:1.24:0,1,167	0/0:60,0:7:10.66:0,11,87	0/0:63,0:10:6.24:0,6,41	1/1:23,2:24:39.71:408,40,0	1/1:18,0:16:32.41:228,32,0	1/1:8,4:10:17.98:203,18,0	1/1:34,0:34:58.92:508,59,0	1/1:11,0:11:13.31:143,13,0	1/1:22,0:20:37.61:282,38,0	1/1:13,1:14:10.90:202,11,0	1/1:14,0:13:10.30:142,10,0	1/1:15,1:16:38.97:320,39,0	1/1:12,2:14:40.51:331,41,0	1/1:12,0:12:28.40:225,28,0	1/1:9,1:9:20.89:180,21,0	1/1:15,0:14:29.24:244,29,0	1/1:7,0:7:16.20:124,16,0	1/1:31,2:27:69.04:610,69,0	1/1:21,1:22:56.42:510,56,0	1/1:10,0:8:15.37:116,15,0	1/1:9,4:13:30.01:348,30,0	1/1:16,1:15:29.60:227,30,0	1/1:8,0:8:14.29:87,14,0	1/1:12,1:13:16.97:198,17,0	1/1:25,1:24:68.88:603,69,0	1/1:18,0:17:47.40:401,47,0	1/1:10,0:9:18.37:140,18,0
chr10	81650390	.	AC	A	6621.15	PASS	AB=0.995;AC=51;AF=0.911;AN=56;BaseQRankSum=-0.276;DP=532;FS=0.947;HRun=1;HaplotypeScore=112.3420;InbreedingCoeff=0.3920;MQ=46.39;MQ0=32;MQRankSum=-0.465;QD=14.09;ReadPosRankSum=1.573;VQSLOD=4.3357;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:22.60:184,23,0	0/1:9,0:8:6.77:7,0,100	0/0:62,0:8:7.55:0,8,54	0/1:61,1:10:9.95:10,0,25	1/1:23,2:24:36.71:346,37,0	1/1:4,14:16:32.74:358,33,0	1/1:11,0:9:17.93:144,18,0	1/1:33,0:33:52.36:404,52,0	1/1:5,5:10:23.44:234,23,0	1/1:22,0:20:43.85:268,44,0	0/1:13,0:13:4.83:124,0,5	1/1:9,6:14:27.77:311,28,0	1/1:17,0:17:50.66:399,51,0	1/1:12,1:13:37.84:269,38,0	1/1:12,0:12:27.61:174,28,0	1/1:10,0:9:20.87:166,21,0	1/1:14,0:13:34.87:227,35,0	1/1:8,0:8:16.84:110,17,0	1/1:31,0:26:67.62:506,68,0	1/1:20,2:22:56.65:407,57,0	1/1:9,0:7:15.73:103,16,0	1/1:11,2:13:28.82:223,29,0	1/1:4,11:13:30:350,30,0	1/1:3,4:7:14.99:168,15,0	1/1:12,1:13:27.90:180,28,0	1/1:24,2:24:68.25:485,68,0	1/1:18,0:18:46.11:336,46,0	1/1:8,0:7:17.87:128,18,0
chr10	81650795	.	AAATAATAAT	A	863.68	PASS	AC=26;AF=0.765;AN=34;BaseQRankSum=0.708;DP=167;FS=0.000;HRun=0;HaplotypeScore=51.1109;InbreedingCoeff=0.2441;MQ=64.07;MQ0=3;MQRankSum=1.528;QD=9.29;ReadPosRankSum=2.273;VQSLOD=0.8858;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:8:2.12:58,2,0	1/1:5,0:9:1.25:3,1,0	./.	0/0:8,0:4:0.47:0,0,1	./.	1/1:6,2:9:6.02:144,6,0	1/1:6,0:6:3.01:41,3,0	0/0:20,0:19:3.01:0,3,35	1/1:3,2:5:6.02:163,6,0	1/1:13,0:13:2.82:58,3,0	./.	1/1:7,0:7:3.01:41,3,0	1/1:4,0:4:3.01:69,3,0	1/1:3,0:3:3.01:41,3,0	./.	./.	1/1:9,0:9:5.10:71,5,0	0/0:10,0:10:0.89:0,1,2	./.	0/0:4,0:4:0.89:0,1,2	./.	./.	./.	./.	1/1:8,0:8:6.01:85,6,0	./.	1/1:9,0:9:3.01:60,3,0	1/1:2,0:2:6.02:115,6,0
chr10	81650823	.	AAT	A	519.81	PASS	AB=0.848;AC=13;AF=0.283;AN=46;BaseQRankSum=0.775;DP=124;FS=6.283;HRun=0;HaplotypeScore=36.0741;InbreedingCoeff=-0.2266;MQ=53.32;MQ0=6;MQRankSum=-2.273;QD=7.12;ReadPosRankSum=3.865;VQSLOD=1.7816;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:5:30.29:30,0,85	0/0:5,0:5:5.62:0,6,106	./.	0/1:9,0:2:0:0,0,0	0/0:5,1:6:15.05:0,15,184	0/1:5,0:5:5.35:5,0,63	0/0:1,0:1:3.01:0,3,39	0/0:29,0:28:83.06:0,83,994	0/1:5,0:5:1.18:1,0,97	1/1:2,1:3:6.02:80,6,0	./.	0/0:1,0:1:3.01:0,3,39	0/0:3,0:3:1.55:0,2,4	0/0:2,0:2:6.02:0,6,80	0/0:1,0:1:3.01:0,3,37	0/0:1,0:1:3.01:0,3,37	0/1:14,2:16:18.86:233,0,19	0/1:2,3:5:32.31:32,0,62	0/1:4,2:6:25.71:26,0,133	0/1:1,1:2:27.47:35,0,27	./.	./.	0/0:1,0:1:3.01:0,3,37	./.	0/1:3,1:4:10.73:70,0,11	0/0:1,0:1:3.01:0,3,37	0/1:3,1:4:26.01:74,0,26	0/1:6,2:6:55.78:56,0,130
chr10	81650828	.	TAATAATAATAATAATA	T	1264.26	PASS	AB=1.000;AC=29;AF=0.580;AN=50;BaseQRankSum=3.691;DP=133;FS=12.055;HRun=0;HaplotypeScore=69.8256;InbreedingCoeff=0.4220;MQ=61.43;MQ0=6;MQRankSum=2.581;QD=16.64;ReadPosRankSum=-1.600;VQSLOD=0.4410;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:6:1.43:116,0,1	0/0:5,0:5:9.03:0,9,165	0/0:3,0:2:6.02:0,6,82	0/0:8,0:3:3.27:0,3,42	1/1:6,0:6:8.67:28,9,0	0/1:5,0:5:14.83:15,0,67	0/0:1,0:1:2.98:0,3,22	0/0:31,0:30:7.19:0,7,538	0/0:4,0:4:12.04:0,12,224	1/1:3,1:4:8.88:168,9,0	0/1:2,0:2:0.18:7,0,0	0/0:1,0:1:2.99:0,3,23	1/1:2,0:2:3.01:36,3,0	0/0:2,0:2:1.82:0,2,20	1/1:1,0:1:2.68:11,3,0	1/1:1,0:1:2.60:10,3,0	1/1:15,1:16:1.24:132,1,0	1/1:6,0:6:10.75:111,11,0	1/1:7,0:7:14.75:75,15,0	1/1:2,0:2:3:58,3,0	./.	./.	0/0:1,0:1:3.01:0,3,41	./.	1/1:3,1:4:9.01:189,9,0	1/1:1,0:1:2.80:13,3,0	1/1:1,1:2:5.23:135,5,0	1/1:8,2:8:21.13:313,21,0
chr10	81650844	.	AAAT	A	1524.97	PASS	AB=1.000;AC=15;AF=0.313;AN=48;BaseQRankSum=-2.704;DP=163;FS=5.705;HRun=0;HaplotypeScore=46.5812;InbreedingCoeff=0.4420;MQ=69.52;MQ0=3;MQRankSum=2.709;QD=17.33;ReadPosRankSum=-0.400;VQSLOD=2.0516;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:5:2.27:2,0,106	0/0:5,0:5:8.86:0,9,99	0/0:6,0:5:14.78:0,15,218	0/0:6,0:2:4.56:0,5,42	0/0:6,0:6:18.04:0,18,187	0/0:7,0:7:17.52:0,18,212	./.	1/1:7,30:37:90.22:1255,90,0	0/0:4,0:4:11.56:0,12,118	0/1:3,0:3:9.80:10,0,32	0/0:5,0:5:15.01:0,15,147	./.	1/1:2,0:2:3.01:34,3,0	1/1:5,0:5:15.05:216,15,0	0/0:3,0:3:9:0,9,83	0/0:2,0:2:5.99:0,6,49	0/1:1,0:13:2.79:3,0,24	0/0:6,0:6:11.90:0,12,105	0/0:11,0:11:29.98:0,30,299	0/0:3,0:3:9:0,9,87	./.	1/1:3,0:3:9.03:127,9,0	0/0:7,0:7:21.07:0,21,345	./.	1/1:3,0:3:3.66:19,4,0	0/0:4,0:4:5.97:0,6,45	0/1:4,0:4:5.69:6,0,67	0/1:13,0:11:0.84:1,0,239
chr10	81651130	.	C	CA	10401.22	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-10.809;DP=497;FS=7.999;HRun=8;HaplotypeScore=46.8476;InbreedingCoeff=0.9784;MQ=77.64;MQ0=1;MQRankSum=-0.725;QD=28.04;ReadPosRankSum=0.222;VQSLOD=5.0686;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:17:39.77:202,40,0	0/0:6,0:6:18.01:0,18,165	0/0:13,0:13:12.59:0,13,93	0/0:17,0:16:6.89:0,7,117	1/1:3,14:17:42.12:485,42,0	0/0:19,0:19:57.03:0,57,521	1/1:2,17:19:48.14:554,48,0	1/1:4,22:26:69.19:782,69,0	0/0:22,0:22:63.01:0,63,567	1/1:3,20:23:60.17:683,60,0	1/1:0,16:16:45.09:505,45,0	0/0:22,0:22:57.01:0,57,517	1/1:3,16:19:36.11:415,36,0	1/1:4,22:26:66.20:762,66,0	1/1:1,12:13:33.10:381,33,0	1/1:1,22:23:57.17:658,57,0	1/1:1,12:13:33.10:381,33,0	1/1:2,13:15:33.10:381,33,0	1/1:4,14:18:42.12:485,42,0	1/1:1,24:25:66.20:762,66,0	1/1:1,11:12:30.09:346,30,0	1/1:1,14:15:36.11:415,36,0	0/0:15,0:15:42.02:0,42,384	0/0:12,0:12:33.02:0,33,302	1/1:1,23:24:60.18:692,60,0	1/1:1,19:20:57.15:647,57,0	1/1:3,19:21:51.15:589,51,0	1/1:0,8:8:24.07:277,24,0
chr10	81651504	.	CA	C	4059.99	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.119;DP=645;FS=5.006;HRun=2;HaplotypeScore=63.7909;InbreedingCoeff=0.9923;MQ=74.26;MQ0=0;MQRankSum=-1.596;QD=37.94;ReadPosRankSum=1.435;VQSLOD=4.3765;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.30:0,93,1455	0/0:9,0:9:27.09:0,27,432	0/0:13,0:13:38.34:0,38,540	0/0:9,0:8:15.01:0,15,204	0/0:29,0:29:87.29:0,87,1373	1/1:0,23:23:63.21:873,63,0	0/0:22,0:22:63.20:0,63,982	0/0:41,0:41:99:0,123,1905	1/1:0,19:19:51.17:713,51,0	0/0:26,0:26:75.24:0,75,1160	0/0:33,0:33:99:0,99,1532	1/1:0,25:25:72.24:1006,72,0	0/0:25,0:25:75.26:0,75,1197	0/0:18,0:18:54.18:0,54,860	0/0:29,0:29:87.28:0,87,1365	0/0:24,0:24:72.25:0,72,1151	0/0:26,0:26:75.23:0,75,1171	0/0:5,0:5:15.05:0,15,240	0/0:30,0:30:90.27:0,90,1336	0/0:38,0:38:99:0,114,1793	0/0:14,0:14:42.13:0,42,646	0/0:15,0:15:45.14:0,45,696	1/1:0,22:22:63.21:880,63,0	1/1:0,18:18:42.14:587,42,0	0/0:26,0:26:78.24:0,78,1201	0/0:37,0:37:99:0,111,1730	0/0:23,0:23:69.24:0,69,1103	0/0:15,0:15:39.09:0,39,596
chr10	81652034	.	A	AT	655.96	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.297;DP=588;FS=4.338;HRun=5;HaplotypeScore=52.8766;InbreedingCoeff=0.8837;MQ=76.22;MQ0=0;MQRankSum=-1.300;QD=27.33;ReadPosRankSum=1.128;VQSLOD=3.6148;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:57.66:751,58,0	0/0:2,0:2:6.02:0,6,64	0/0:12,0:12:33.08:0,33,355	0/0:18,0:18:27.72:0,28,404	0/0:33,0:33:93.23:0,93,998	0/0:26,0:26:72.18:0,72,774	0/0:16,0:16:45.10:0,45,475	0/0:32,0:32:84.18:0,84,883	0/0:12,0:12:33.08:0,33,355	0/0:25,0:25:72.17:0,72,762	0/0:26,0:26:75.17:0,75,797	0/0:20,0:20:51.09:0,51,531	0/0:30,0:30:90.21:0,90,959	0/0:24,0:24:72.16:0,72,765	0/0:29,0:29:87.22:0,87,935	0/0:28,0:28:81.18:0,81,861	0/0:19,0:19:51.11:0,51,548	0/0:7,0:7:15.03:0,15,161	0/0:9,0:9:27.07:0,27,290	0/0:34,0:34:96.24:0,96,1031	0/0:9,0:9:18.01:0,18,176	0/0:21,0:21:63.13:0,63,661	0/0:27,0:27:72.16:0,72,766	0/0:15,0:15:45.11:0,45,483	0/0:23,0:23:66.17:0,66,709	0/0:28,0:28:66.16:0,66,709	0/0:28,0:28:81.17:0,81,854	0/0:11,0:11:33.08:0,33,355
chr10	81652790	.	GGTGTGTGT	G	3628.42	PASS	AB=0.843;AC=26;AF=0.500;AN=52;BaseQRankSum=-4.856;DP=496;FS=0.000;HRun=0;HaplotypeScore=126.8702;InbreedingCoeff=0.4279;MQ=59.11;MQ0=43;MQRankSum=-0.002;QD=13.49;ReadPosRankSum=2.593;VQSLOD=2.5879;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:15:0.47:1,0,0	0/0:10,0:10:12.04:0,12,278	./.	0/0:26,0:12:3:0,3,25	1/1:27,1:27:29.66:660,30,0	0/1:19,0:15:16.25:16,0,199	0/0:21,0:18:15.04:0,15,377	1/1:20,0:19:1.83:4,2,0	0/0:13,0:13:7.73:0,8,162	1/1:14,0:14:9.03:203,9,0	0/1:15,0:15:64.19:251,0,64	0/0:14,0:13:14.84:0,15,270	0/0:7,0:19:15.49:0,15,334	0/0:18,0:16:12.04:0,12,362	1/1:15,1:13:17.73:378,18,0	1/1:6,7:13:5.42:138,5,0	1/1:22,0:19:18.02:322,18,0	0/1:6,0:9:49.43:276,0,49	1/1:7,4:10:12.04:190,12,0	0/1:8,7:15:22.18:65,0,22	1/1:16,0:13:11.71:234,12,0	0/0:16,0:20:12.04:0,12,402	0/0:27,0:26:1.09:0,1,299	0/0:26,0:25:18.24:0,18,202	0/1:7,9:15:0:0,0,0	1/1:15,1:15:25.33:574,25,0	0/1:14,0:13:5.76:316,0,6	./.
chr10	81654104	.	C	CA	1462	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.373;DP=699;FS=2.267;HRun=1;HaplotypeScore=85.0566;InbreedingCoeff=0.9689;MQ=88.15;MQ0=0;MQRankSum=-2.962;QD=44.30;ReadPosRankSum=-4.621;VQSLOD=2.1907;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1510	0/0:20,0:20:60.20:0,60,831	0/0:26,0:26:72.23:0,72,973	0/0:23,0:23:66.18:0,66,892	0/0:28,0:28:84.28:0,84,1171	0/0:31,0:31:93.30:0,93,1269	0/0:28,0:28:81.25:0,81,1099	1/1:0,33:33:99:1557,99,0	0/0:16,0:16:48.16:0,48,671	0/0:34,0:34:99:0,99,1354	0/0:25,0:25:75.21:0,75,996	0/0:27,0:27:75.25:0,75,1049	0/0:34,0:34:99:0,102,1371	0/0:25,0:25:73.77:0,74,978	0/0:26,0:26:78.25:0,78,1074	0/0:26,0:26:78.26:0,78,1091	0/0:17,0:17:51.14:0,51,674	0/0:9,0:9:27.09:0,27,377	0/0:27,0:27:78.20:0,78,1003	0/0:29,0:29:84.27:0,84,1159	0/0:45,0:45:99:0,132,1846	0/0:15,0:15:45.15:0,45,629	0/0:16,0:16:48.15:0,48,654	0/0:22,0:22:63.20:0,63,862	0/0:12,0:12:30.10:0,30,416	0/0:26,0:26:78.26:0,78,1091	0/0:38,0:38:99:0,114,1573	0/0:4,0:4:12.04:0,12,168
chr10	81654973	.	CA	C	3223.52	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=2.969;DP=765;FS=8.382;HRun=4;HaplotypeScore=89.5413;InbreedingCoeff=0.9982;MQ=91.47;MQ0=0;MQRankSum=-4.469;QD=32.24;ReadPosRankSum=0.965;VQSLOD=3.8189;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.18:0,54,753	0/0:7,0:7:21.07:0,21,293	0/0:31,0:31:81.25:0,81,1093	0/0:30,0:30:75.24:0,75,1012	0/0:34,0:34:93.27:0,93,1275	0/0:42,0:42:99:0,126,1729	1/1:1,14:15:42.13:504,42,0	0/0:41,0:41:99:0,114,1537	0/0:25,0:25:72.23:0,72,990	0/0:36,0:36:99:0,99,1370	0/0:28,0:28:78.24:0,78,1061	0/0:37,0:37:99:0,111,1507	1/1:1,31:32:87.27:1044,87,0	1/1:0,30:30:87.27:1044,87,0	0/0:25,0:25:75.25:0,75,1050	0/0:39,0:39:99:0,117,1608	0/0:20,0:20:60.20:0,60,839	0/0:19,0:19:54.18:0,54,756	0/0:16,0:16:45.15:0,45,628	0/0:39,0:39:99:0,111,1554	0/0:33,0:33:93.31:0,93,1302	1/1:0,23:23:66.20:792,66,0	0/0:20,0:20:54.17:0,54,738	0/0:24,0:24:69.19:0,69,944	0/0:12,0:12:33.11:0,33,462	0/0:32,0:32:96.32:0,96,1345	0/0:46,0:46:99:0,135,1888	0/0:8,0:8:24.08:0,24,336
chr10	81655722	.	CATTTACTGGT	C	2106.73	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.659;DP=710;FS=1.631;HRun=0;HaplotypeScore=214.9463;InbreedingCoeff=0.9053;MQ=83.38;MQ0=0;MQRankSum=-6.441;QD=81.03;ReadPosRankSum=-2.286;VQSLOD=3.3790;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,6385	0/0:15,0:15:45.15:0,45,2473	0/0:20,0:20:60.21:0,60,2801	0/0:21,0:21:63.22:0,63,3031	0/0:42,0:42:99:0,126,6757	0/0:22,0:22:66.23:0,66,3339	0/0:26,0:26:78.27:0,78,3991	1/1:0,26:26:74.87:2202,75,0	0/0:22,0:22:66.23:0,66,3547	0/0:26,0:26:75.26:0,75,3992	0/0:38,0:38:99:0,114,6168	0/0:24,0:24:72.25:0,72,3814	0/0:27,0:27:81.28:0,81,4047	0/0:28,0:28:84.29:0,84,4393	0/0:39,0:39:99:0,117,5761	0/0:18,0:18:54.19:0,54,2752	0/0:19,0:19:57.20:0,57,2991	0/0:17,0:17:51.18:0,51,2576	0/0:23,0:23:69.24:0,69,3425	0/0:32,0:32:96.30:0,96,4787	0/0:13,0:13:39.13:0,39,1839	0/0:23,0:23:69.21:0,69,3602	0/0:36,0:36:99:0,108,5443	0/0:19,0:19:51.18:0,51,2734	0/0:30,0:30:90.31:0,90,4772	0/0:27,0:27:81.28:0,81,4301	0/0:30,0:29:87.26:0,87,4376	0/0:2,0:2:6.02:0,6,330
chr10	81656662	.	A	ACACAGT	6685.13	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.335;DP=785;FS=4.289;HRun=0;HaplotypeScore=162.6125;InbreedingCoeff=0.9802;MQ=81.47;MQ0=1;MQRankSum=-12.511;QD=87.96;ReadPosRankSum=-5.592;VQSLOD=4.5590;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:6,18:23:57.20:1991,57,0	0/0:14,0:14:39.13:0,39,899	0/0:23,0:23:57.17:0,57,1187	0/0:28,0:27:58.08:0,58,1261	0/0:39,0:39:99:0,111,2511	0/0:31,0:31:81.24:0,81,1774	0/0:17,0:17:51.16:0,51,1082	1/1:23,26:52:99:4694,148,0	0/0:31,0:31:81.28:0,81,1844	0/0:37,0:37:96.32:0,96,2174	0/0:27,0:27:72.25:0,72,1637	0/0:29,0:29:87.30:0,87,1955	0/0:29,0:29:78.27:0,78,1775	0/0:26,0:26:75.26:0,75,1700	0/0:29,0:29:81.26:0,81,1802	0/0:37,0:36:96.32:0,96,2169	0/0:21,0:21:31.95:0,32,1237	0/0:17,0:17:18.06:0,18,875	0/0:20,0:20:54.17:0,54,1088	0/0:30,0:30:78.25:0,78,1753	0/0:38,0:37:99:0,105,2369	0/0:28,0:28:84.29:0,84,1915	0/0:30,0:30:78.27:0,78,1775	0/0:27,0:27:78.27:0,78,1798	0/0:29,0:29:78.27:0,78,1799	0/0:22,0:22:57.20:0,57,1315	0/0:46,0:46:99:0,132,2951	0/0:4,0:4:12.04:0,12,277
chr10	81657400	.	AT	A	4586.37	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.007;DP=714;FS=3.671;HRun=3;HaplotypeScore=69.5666;InbreedingCoeff=0.9997;MQ=72.61;MQ0=0;MQRankSum=1.511;QD=31.20;ReadPosRankSum=-0.464;VQSLOD=4.5100;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:56:0,56,315	0/0:12,0:12:36.10:0,36,483	0/0:19,0:19:51.13:0,51,628	0/0:10,0:10:27.01:0,27,292	0/0:34,0:34:99:0,99,1334	0/0:19,0:19:54.13:0,54,702	1/1:1,14:15:36.11:438,36,0	1/1:0,38:38:99:1310,111,0	0/0:19,0:19:54.16:0,54,756	0/0:29,0:29:87.29:0,87,1234	0/0:22,0:22:63.20:0,63,887	0/0:34,0:34:99:0,99,1315	1/1:0,37:37:93.29:1150,93,0	1/1:0,36:36:78.25:965,78,0	0/0:31,0:30:93.23:0,93,1228	0/0:19,0:19:57.18:0,57,801	0/0:19,0:19:57.15:0,57,780	0/0:23,0:23:69.18:0,69,934	0/0:23,0:23:63.13:0,63,829	0/0:26,0:26:78.24:0,78,1085	0/0:20,0:20:60.20:0,60,862	1/1:0,21:21:60.10:722,60,0	0/0:31,0:31:90.11:0,90,1229	0/0:30,0:30:90.29:0,90,1275	0/0:37,0:37:99:0,108,1423	0/0:36,0:36:99:0,102,1386	0/0:22,0:22:60.15:0,60,803	0/0:18,0:18:54.17:0,54,759
chr10	81660135	.	TTAGG	T	1565.92	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.011;DP=616;FS=12.361;HRun=0;HaplotypeScore=100.2488;InbreedingCoeff=0.9910;MQ=77.33;MQ0=0;MQRankSum=-4.415;QD=52.20;ReadPosRankSum=-3.759;VQSLOD=2.7500;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.20:0,57,1492	0/0:7,0:7:21.07:0,21,566	0/0:19,0:18:43.06:0,43,1011	0/0:9,0:9:20.96:0,21,488	0/0:30,0:30:87.30:0,87,2293	0/0:24,0:24:72.21:0,72,1828	0/0:12,0:12:36.11:0,36,894	1/1:0,30:30:90.27:1661,90,0	0/0:19,0:19:54.18:0,54,1429	0/0:28,0:28:84.29:0,84,2230	0/0:37,0:37:99:0,108,2825	0/0:24,0:24:72.25:0,72,1918	0/0:23,0:23:66.21:0,66,1702	0/0:23,0:23:66.22:0,66,1747	0/0:20,0:20:60.21:0,60,1584	0/0:18,0:18:54.19:0,54,1417	0/0:28,0:28:78.26:0,78,2071	0/0:12,0:12:36.12:0,36,969	0/0:22,0:22:63.21:0,63,1678	0/0:31,0:31:87.27:0,87,2184	0/0:12,0:12:36.12:0,36,971	0/0:14,0:14:39.12:0,39,944	0/0:25,0:25:72.14:0,72,1930	0/0:10,0:10:30.10:0,30,809	0/0:38,0:38:99:0,111,2911	0/0:23,0:23:69.24:0,69,1852	0/0:35,0:35:99:0,105,2652	0/0:23,0:23:69.24:0,69,1811
chr10	81660668	.	GA	G	3731.10	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.063;DP=620;FS=3.864;HRun=7;HaplotypeScore=66.5052;InbreedingCoeff=0.9988;MQ=79.16;MQ0=1;MQRankSum=-2.369;QD=24.55;ReadPosRankSum=3.764;VQSLOD=4.2355;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:61.04:583,61,0	0/0:8,0:8:24.07:0,24,290	0/0:29,0:24:44.24:0,44,465	0/0:20,0:21:41.85:0,42,429	0/0:27,0:27:66.14:0,66,806	1/1:3,32:35:87.19:886,87,0	0/0:15,0:15:42.10:0,42,489	0/0:29,0:29:66.20:0,66,809	1/1:3,21:24:57.13:581,57,0	0/0:25,0:25:69.19:0,69,833	0/0:21,0:21:54.16:0,54,657	1/1:0,19:19:51.12:520,51,0	0/0:31,0:31:87.25:0,87,1057	0/0:26,0:26:75.19:0,75,891	0/0:30,0:30:84.26:0,84,1045	0/0:15,0:15:42.13:0,42,528	0/0:29,0:28:81.23:0,81,1003	0/0:10,0:10:26.86:0,27,300	0/0:14,0:14:39.12:0,39,480	0/0:31,0:31:81.20:0,81,966	0/0:9,0:9:24.05:0,24,273	0/0:21,0:21:54.15:0,54,655	1/1:1,18:19:45.10:458,45,0	1/1:2,25:27:69.16:703,69,0	0/0:16,0:16:42.13:0,42,528	0/0:21,1:22:30:0,30,641	0/0:25,0:24:72.23:0,72,904	0/0:13,0:13:39.11:0,39,478
chr10	81660798	.	A	AT	10506.50	PASS	AB=0.533;AC=37;AF=0.661;AN=56;BaseQRankSum=-16.459;DP=562;FS=9.005;HRun=9;HaplotypeScore=98.4415;InbreedingCoeff=0.9390;MQ=71.33;MQ0=1;MQRankSum=5.483;QD=25.63;ReadPosRankSum=-1.156;VQSLOD=4.0422;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:18:26.94:0,27,78	0/0:7,0:7:14.98:0,15,130	0/0:12,0:12:25.53:0,26,209	0/0:6,0:6:11.99:0,12,104	1/1:3,23:26:66.14:717,66,0	0/0:0,0:32:62.92:0,63,184	1/1:7,14:21:16.06:405,16,0	1/1:6,20:27:40.21:641,40,0	0/0:1,0:16:30.54:0,31,90	1/1:3,21:24:63.16:687,63,0	1/1:3,12:15:36.02:371,36,0	0/0:2,0:22:40.73:0,41,120	1/1:4,24:28:72.19:797,72,0	1/1:3,19:23:33.94:586,34,0	1/1:4,24:28:63.17:697,63,0	1/1:2,7:9:18.05:198,18,0	1/1:2,15:17:42.11:465,42,0	0/1:1,7:8:1.98:208,0,2	1/1:8,15:23:45.09:478,45,0	1/1:5,29:35:60.87:832,61,0	1/1:1,11:12:27.07:299,27,0	1/1:2,26:28:75.20:830,75,0	0/0:0,0:24:44.81:0,45,132	0/0:1,0:14:22.40:0,22,66	1/1:3,18:21:51.14:564,51,0	1/1:5,19:24:34.11:604,34,0	1/1:0,24:24:63.64:697,64,0	1/1:4,13:17:39.11:431,39,0
chr10	81661048	.	G	GA	7696.74	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-12.314;DP=647;FS=0.000;HRun=6;HaplotypeScore=65.0947;InbreedingCoeff=0.9975;MQ=80.39;MQ0=2;MQRankSum=-1.950;QD=32.48;ReadPosRankSum=3.194;VQSLOD=5.0800;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,34:37:99:1283,102,0	0/0:8,0:8:21.05:0,21,214	0/0:16,0:16:25.60:0,26,248	0/0:22,0:22:38.85:0,39,367	0/0:31,0:31:78.17:0,78,796	1/1:2,28:30:75.24:941,75,0	1/1:2,6:8:18.06:226,18,0	0/0:24,0:24:60.13:0,60,607	1/1:5,22:27:63.20:793,63,0	0/0:21,0:21:63.14:0,63,643	0/0:18,0:18:42.09:0,42,428	1/1:2,24:26:69.22:868,69,0	1/1:0,25:25:66.21:830,66,0	1/1:2,16:18:51.16:640,51,0	0/0:36,0:36:99:0,102,1032	0/0:32,0:32:87.20:0,87,887	0/0:23,0:21:57.13:0,57,581	0/0:8,0:8:24.02:0,24,234	0/0:18,0:17:54.12:0,54,551	0/0:39,0:39:90.19:0,90,918	0/0:21,0:21:63.14:0,63,643	1/1:0,21:21:63.20:792,63,0	1/1:2,24:26:63.12:757,63,0	1/1:3,16:19:45.14:566,45,0	0/0:19,0:19:48.10:0,48,490	0/0:31,0:31:81.17:0,81,821	0/0:34,0:34:96.20:0,96,972	0/0:9,0:9:27.04:0,27,267
chr10	81661744	.	G	GT	908.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.053;DP=596;FS=2.490;HRun=7;HaplotypeScore=135.2314;InbreedingCoeff=0.9844;MQ=77.05;MQ0=0;MQRankSum=-1.675;QD=25.22;ReadPosRankSum=-4.044;VQSLOD=1.0823;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:56.90:0,57,512	0/0:10,0:10:24.04:0,24,232	0/0:18,0:18:44.09:0,44,405	0/0:14,0:14:27.04:0,27,260	0/0:26,0:26:75.07:0,75,704	0/0:25,0:25:66.07:0,66,626	0/0:11,0:11:23.95:0,24,214	1/1:7,29:36:84.25:1003,84,0	0/0:19,0:19:44.88:0,45,400	0/0:30,0:30:74.94:0,75,704	0/0:25,0:25:66.09:0,66,634	0/0:21,0:21:54.08:0,54,521	0/0:29,0:29:81.04:0,81,763	0/0:13,0:13:33.01:0,33,310	0/0:22,0:22:62.99:0,63,583	0/0:37,0:37:86.97:0,87,799	0/0:23,0:23:57.07:0,57,544	0/0:8,0:8:17.91:0,18,174	0/0:20,0:20:45.06:0,45,434	0/0:22,0:22:57.08:0,57,550	0/0:17,0:17:42.06:0,42,405	0/0:27,0:27:72.07:0,72,683	0/0:20,0:20:54.08:0,54,517	0/0:25,0:24:63.10:0,63,608	0/0:19,0:19:51.08:0,51,493	0/0:22,0:22:63.10:0,63,608	0/0:26,0:26:72.05:0,72,681	0/0:9,0:9:24.04:0,24,231
chr10	81662059	.	CA	C	17375.57	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=6.662;DP=579;FS=6.942;HRun=3;HaplotypeScore=95.6540;InbreedingCoeff=0.9763;MQ=89.36;MQ0=0;MQRankSum=-8.932;QD=33.41;ReadPosRankSum=5.774;VQSLOD=4.7083;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:69.22:854,69,0	0/0:15,0:15:45.15:0,45,648	0/0:27,0:27:71.96:0,72,962	0/0:17,0:17:51.14:0,51,693	1/1:0,28:28:72.23:893,72,0	1/1:2,25:27:69.22:855,69,0	1/1:2,17:19:48.15:595,48,0	1/1:4,28:32:84.21:992,84,0	1/1:0,21:21:57.18:707,57,0	1/1:2,19:21:57.18:703,57,0	1/1:0,30:30:81.25:1004,81,0	1/1:0,12:12:36.11:446,36,0	1/1:2,22:24:63.19:769,63,0	1/1:1,15:16:39.12:483,39,0	1/1:0,21:21:57.18:707,57,0	1/1:0,36:36:96.30:1190,96,0	1/1:0,18:18:48.15:595,48,0	1/1:0,7:7:18.06:223,18,0	1/1:1,13:14:39.12:484,39,0	1/1:1,22:23:63.20:781,63,0	1/1:0,18:18:54.17:670,54,0	1/1:0,14:14:42.13:521,42,0	1/1:0,21:21:63.20:781,63,0	1/1:1,9:10:27.08:335,27,0	1/1:0,13:13:39.12:484,39,0	1/1:0,28:28:84.26:1042,84,0	1/1:1,35:36:93.29:1153,93,0	1/1:0,4:4:9.03:112,9,0
chr10	81662645	.	GAGAGAGAGACAGAC	G	13536.16	PASS	AB=0.750;AC=27;AF=0.482;AN=56;BaseQRankSum=-7.610;DP=612;FS=7.220;HRun=0;HaplotypeScore=315.1329;InbreedingCoeff=0.8852;MQ=69.96;MQ0=4;MQRankSum=-9.471;QD=64.46;ReadPosRankSum=2.115;VQSLOD=3.6129;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:16.73:0,17,1817	0/0:7,0:7:15.05:0,15,1001	0/0:46,0:36:59.37:0,59,2727	0/0:52,0:31:59.52:0,60,1853	1/1:7,9:16:27.07:732,27,0	0/0:30,0:30:57.20:0,57,1864	0/0:13,0:11:30.10:0,30,1016	0/0:45,0:43:99:0,123,3772	0/0:27,0:27:54.15:0,54,1664	1/1:5,17:22:48.14:1560,48,0	1/1:6,7:13:24.08:957,24,0	0/0:23,0:23:48.16:0,48,1531	0/0:34,0:34:81.28:0,81,2685	0/0:21,0:21:45.15:0,45,1483	1/1:4,12:16:27.09:1076,27,0	1/1:5,8:13:18.06:736,18,0	1/1:6,10:16:21.07:675,21,0	0/1:2,1:3:11.01:133,0,11	1/1:11,4:15:12.04:325,12,0	1/1:5,23:28:51.18:1977,51,0	1/1:6,2:8:6.02:245,6,0	0/0:17,0:17:42.14:0,42,1394	0/0:28,0:28:57.18:0,57,1770	0/0:23,0:23:66.14:0,66,2216	1/1:5,8:13:30.10:1153,30,0	1/1:4,22:26:60.16:1792,60,0	1/1:3,17:20:51.18:2053,51,0	1/1:0,1:1:3.01:123,3,0
chr10	81662651	.	GAGAC	G	13584.81	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=5.672;DP=605;FS=0.000;HRun=0;HaplotypeScore=204.6436;InbreedingCoeff=0.7433;MQ=68.34;MQ0=4;MQRankSum=-5.397;QD=26.95;ReadPosRankSum=5.669;VQSLOD=4.4510;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,29:35:54.18:969,54,0	0/0:5,0:5:15.05:0,15,386	0/0:44,0:33:56.03:0,56,912	0/0:52,0:31:31.01:0,31,592	0/1:16,0:16:8.75:103,0,9	1/1:3,26:29:54.19:969,54,0	1/1:5,8:12:33.10:552,33,0	1/1:6,40:44:79.04:1613,79,0	1/1:5,24:29:48.16:861,48,0	1/1:21,0:21:19.32:334,19,0	1/1:14,0:14:26.95:239,27,0	1/1:4,19:23:45.15:802,45,0	1/1:8,23:31:78.24:1313,78,0	1/1:1,23:24:45.15:805,45,0	1/1:15,0:15:26.96:239,27,0	1/1:10,0:10:18.02:167,18,0	1/1:11,0:12:17.89:161,18,0	1/1:5,0:5:8.93:67,9,0	1/1:13,0:13:11.94:96,12,0	1/1:28,0:28:50.85:441,51,0	1/1:9,0:9:6.01:55,6,0	1/1:1,19:20:42.14:746,42,0	1/1:6,24:30:51.16:883,51,0	1/1:5,18:23:4.98:937,5,0	1/1:11,0:11:29.65:242,30,0	1/1:26,0:26:53.85:461,54,0	1/1:18,0:18:50.97:464,51,0	1/1:3,0:3:8.90:65,9,0
chr10	81662653	.	GAC	G	5028.73	PASS	AB=0.995;AC=48;AF=0.857;AN=56;BaseQRankSum=8.428;DP=588;FS=1.620;HRun=0;HaplotypeScore=209.6840;InbreedingCoeff=0.3469;MQ=72.45;MQ0=4;MQRankSum=-6.755;QD=9.38;ReadPosRankSum=9.039;VQSLOD=3.6701;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,1:34:22.84:296,23,0	0/0:5,0:5:15.05:0,15,287	0/0:47,0:36:37.88:0,38,883	0/1:51,1:31:18.50:19,0,632	0/1:15,0:15:9.12:65,0,9	1/1:28,0:28:19.52:278,20,0	1/1:13,0:12:33.17:223,33,0	0/1:46,0:44:69.70:479,0,70	1/1:27,0:27:4.50:249,4,0	1/1:20,0:20:18.03:181,18,0	1/1:13,0:13:25.61:127,26,0	1/1:22,1:23:10.97:248,11,0	1/1:29,0:29:16.92:346,17,0	1/1:23,0:23:43.86:260,44,0	1/1:14,0:14:25.54:128,26,0	1/1:9,0:9:17.04:83,17,0	1/1:11,0:11:17.40:114,17,0	1/1:6,0:6:8.24:52,8,0	1/1:11,0:11:11.62:68,12,0	1/1:26,0:26:48.49:246,48,0	1/1:9,0:9:5.64:27,6,0	1/1:20,0:20:41.12:286,41,0	0/1:27,0:27:15.36:242,0,15	1/1:22,0:22:17.62:291,18,0	1/1:9,1:11:27.24:136,27,0	1/1:26,0:26:51.90:293,52,0	1/1:18,0:18:48.25:240,48,0	1/1:3,0:3:8.74:51,9,0
chr10	81662741	.	G	GGATAGATA	13796.54	PASS	AB=0.805;AC=44;AF=0.846;AN=52;BaseQRankSum=-2.686;DP=558;FS=2.468;HRun=0;HaplotypeScore=154.9811;InbreedingCoeff=0.6249;MQ=57.67;MQ0=6;MQRankSum=-3.804;QD=29.73;ReadPosRankSum=0.928;VQSLOD=4.3932;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:31:99:281,0,116	0/0:11,0:11:15.05:0,15,373	./.	./.	1/1:14,16:30:20.35:849,20,0	1/1:12,0:23:13.29:501,13,0	1/1:8,5:14:9.02:271,9,0	0/0:26,0:33:11.62:0,12,99	1/1:14,0:21:26.94:219,27,0	1/1:23,4:26:27.09:954,27,0	1/1:8,9:20:24.08:967,24,0	1/1:14,0:21:32.99:366,33,0	1/1:15,5:20:33.07:999,33,0	1/1:16,5:21:24.08:888,24,0	1/1:13,1:15:6:146,6,0	1/1:6,10:17:21.07:825,21,0	1/1:9,0:9:6.02:193,6,0	0/0:9,0:9:3.01:0,3,50	1/1:13,0:12:7.27:193,7,0	1/1:33,7:40:57.17:1666,57,0	0/1:11,1:15:0:0,0,0	1/1:15,7:22:30.10:1135,30,0	1/1:8,0:17:35.96:343,36,0	1/1:5,0:10:17.67:166,18,0	1/1:8,8:20:21.07:856,21,0	1/1:18,5:23:30.09:910,30,0	1/1:9,10:19:18.06:701,18,0	1/1:4,7:13:9.03:367,9,0
chr10	81662886	.	A	ATTTGTTTTGTTTTGT	19055.02	PASS	AB=0.682;AC=43;AF=0.768;AN=56;BaseQRankSum=-6.950;DP=638;FS=0.000;HRun=0;HaplotypeScore=214.5107;InbreedingCoeff=0.4143;MQ=58.29;MQ0=3;MQRankSum=-7.280;QD=34.46;ReadPosRankSum=-3.409;VQSLOD=3.4557;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:75.22:0,75,2658	0/0:13,0:13:30.10:0,30,1255	0/0:22,0:18:19.48:0,19,481	0/1:21,0:17:28.71:29,0,370	1/1:5,12:20:24.05:1386,24,0	0/0:5,0:19:12.44:0,12,34	1/1:5,0:11:3.01:96,3,0	1/1:41,0:38:42.05:1220,42,0	0/1:8,0:21:14.66:21,0,15	1/1:6,9:21:27.08:1434,27,0	1/1:8,9:24:12:435,12,0	0/1:3,0:23:21.16:21,0,26	1/1:6,0:29:39.13:1248,39,0	1/1:9,0:30:36.12:1145,36,0	1/1:9,10:32:6.02:430,6,0	1/1:3,11:21:24.08:1720,24,0	1/1:12,4:23:6.02:430,6,0	1/1:5,4:11:15.05:1004,15,0	1/1:9,8:21:42.14:1472,42,0	1/1:8,23:38:33.04:1841,33,0	1/1:12,0:12:8.99:154,9,0	1/1:12,0:19:42:934,42,0	0/1:4,0:22:9.31:58,0,9	0/1:14,0:24:9.46:66,0,9	1/1:9,13:24:12.04:860,12,0	1/1:9,8:23:39.61:2075,40,0	1/1:12,14:33:15.12:957,15,0	1/1:7,0:7:2.98:21,3,0
chr10	81664627	.	TG	T	4379.66	PASS	AB=0.597;AC=24;AF=0.429;AN=56;BaseQRankSum=13.885;DP=495;FS=8.626;HRun=4;HaplotypeScore=78.4368;InbreedingCoeff=0.6957;MQ=48.52;MQ0=15;MQRankSum=-2.325;QD=21.36;ReadPosRankSum=-3.692;VQSLOD=2.9388;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:96.31:0,96,1326	0/0:14,0:14:42.14:0,42,588	0/0:24,0:4:9.03:0,9,122	0/0:28,1:2:6.01:0,6,56	1/1:3,9:11:21.05:240,21,0	0/0:13,0:13:36.12:0,36,504	0/0:20,0:19:33.11:0,33,461	0/0:24,0:24:60.20:0,60,840	0/0:19,0:19:42.11:0,42,565	1/1:5,12:13:33.10:395,33,0	0/1:5,10:14:50.70:291,0,51	0/0:15,0:15:27.04:0,27,341	0/0:13,0:13:30.10:0,30,419	0/0:18,0:18:45.13:0,45,611	1/1:2,10:12:30.09:356,30,0	1/1:2,10:12:27.08:324,27,0	1/1:6,20:23:39.12:467,39,0	1/1:2,8:10:21.06:252,21,0	0/1:7,7:11:59.89:192,0,60	1/1:3,17:18:39.12:468,39,0	0/1:3,15:18:5.37:342,0,5	0/0:24,0:24:66.22:0,66,922	0/0:17,0:17:39.13:0,39,546	0/0:21,0:21:42.14:0,42,583	1/1:1,11:10:27.08:323,27,0	1/1:4,14:14:33.01:364,33,0	0/1:4,11:14:14.81:260,0,15	1/1:1,3:4:9.03:108,9,0
chr10	81664653	.	AAAGAAAAAAAG	A	2248.47	PASS	AB=1.000;AC=27;AF=0.500;AN=54;BaseQRankSum=6.196;DP=436;FS=6.891;HRun=0;HaplotypeScore=127.9302;InbreedingCoeff=0.7181;MQ=49.47;MQ0=13;MQRankSum=-9.080;QD=14.32;ReadPosRankSum=-1.849;VQSLOD=1.8106;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,103,3300	0/0:13,0:13:39.08:0,39,1172	0/1:20,0:4:12.70:14,0,13	./.	1/1:5,14:19:25.62:321,26,0	0/0:14,0:14:36.01:0,36,1020	0/0:23,0:22:32.89:0,33,961	0/0:32,0:32:90.21:0,90,2553	0/0:24,0:24:25.30:0,25,1048	1/1:8,0:6:14.99:288,15,0	0/1:10,0:8:31.08:130,0,31	0/0:17,0:17:36.08:0,36,1220	0/0:16,0:16:24.08:0,24,1005	0/0:23,0:23:54.52:0,55,1649	1/1:7,0:7:5.98:116,6,0	1/1:5,0:5:5.93:57,6,0	1/1:22,0:19:26.52:223,27,0	1/1:7,0:7:14.97:272,15,0	1/1:9,0:7:14.69:110,15,0	1/1:12,0:11:20.79:189,21,0	0/1:7,0:7:6.79:64,0,7	0/0:17,0:17:45.14:0,45,1341	0/0:16,0:16:23.78:0,24,756	0/0:22,0:22:27.76:0,28,666	1/1:10,0:8:17.95:397,18,0	1/1:10,0:6:10.70:124,11,0	1/1:10,0:9:9.23:129,9,0	1/1:1,0:1:2.98:22,3,0
chr10	81664664	.	G	GA	1864.25	PASS	AB=0.791;AC=36;AF=0.643;AN=56;BaseQRankSum=-4.890;DP=505;FS=2.952;HRun=14;HaplotypeScore=84.8645;InbreedingCoeff=0.2854;MQ=50.88;MQ0=9;MQRankSum=1.362;QD=5.01;ReadPosRankSum=-4.759;VQSLOD=1.2675;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:50:29.36:0,29,111	0/0:10,0:11:16.01:0,16,91	0/0:19,0:2:0.86:0,1,2	0/0:14,0:3:3.18:0,3,15	0/1:22,0:22:1.15:16,0,1	1/1:9,2:13:14.64:100,15,0	1/1:2,15:16:18:158,18,0	1/1:14,26:41:12.51:465,13,0	1/1:4,17:21:21:184,21,0	0/0:13,0:12:2.06:0,2,9	0/0:10,0:9:0.72:0,1,3	1/1:4,13:17:8.04:191,8,0	0/1:5,14:19:10.61:159,0,11	1/1:14,4:19:5.51:170,6,0	1/1:13,0:13:4.16:41,4,0	1/1:10,0:10:1.89:5,2,0	1/1:24,0:21:6.24:32,6,0	0/0:14,0:14:1.35:0,1,8	1/1:14,0:14:6.68:23,7,0	1/1:22,0:20:4.10:28,4,0	0/1:8,0:7:5.01:5,0,11	1/1:9,12:21:10.68:245,11,0	0/1:3,12:15:6.81:68,0,7	0/1:8,13:21:12.47:43,0,12	0/1:18,0:17:1.11:43,0,1	1/1:20,0:19:3.60:9,4,0	1/1:13,0:12:0.71:4,1,0	1/1:4,0:4:2.99:23,3,0
chr10	81664803	.	CTAAAG	C	10975.04	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=16.366;DP=552;FS=13.810;HRun=0;HaplotypeScore=122.4334;InbreedingCoeff=0.9937;MQ=85.42;MQ0=0;MQRankSum=-15.079;QD=48.14;ReadPosRankSum=4.412;VQSLOD=4.5661;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,2952	0/0:6,0:6:15.05:0,15,461	0/0:23,0:23:42.10:0,42,1075	0/0:21,0:21:53.61:0,54,1342	1/1:2,16:18:27.09:559,27,0	0/0:23,0:23:69.22:0,69,2053	0/0:17,0:17:51.18:0,51,1567	0/0:38,0:37:90.29:0,90,2625	0/0:24,0:24:69.24:0,69,2076	1/1:0,25:24:69.24:1429,69,0	1/1:0,19:19:48.16:994,48,0	0/0:27,0:27:78.26:0,78,2263	0/0:22,0:22:63.22:0,63,1865	0/0:25,0:25:75.26:0,75,2304	1/1:0,11:11:33.07:642,33,0	1/1:1,18:19:42.14:870,42,0	1/1:0,12:12:24.08:474,24,0	1/1:1,14:15:36.12:746,36,0	1/1:2,12:14:36.07:633,36,0	1/1:1,21:22:54.18:1094,54,0	1/1:3,12:15:22.88:488,23,0	0/0:23,0:23:66.23:0,66,2027	0/0:17,0:17:48.16:0,48,1476	0/0:21,0:21:63.22:0,63,1875	1/1:1,23:24:60.21:1243,60,0	1/1:0,19:19:54.19:1119,54,0	1/1:2,7:9:18.06:373,18,0	1/1:1,5:6:15.05:311,15,0
chr10	81667551	.	GA	G	10893.84	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-0.304;DP=521;FS=5.583;HRun=9;HaplotypeScore=106.5342;InbreedingCoeff=0.9795;MQ=74.57;MQ0=1;MQRankSum=-4.120;QD=22.65;ReadPosRankSum=2.954;VQSLOD=4.8992;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:15:39.02:357,39,0	0/0:8,0:8:18.05:0,18,207	0/0:16,0:16:25.62:0,26,218	0/0:15,0:14:12.89:0,13,164	1/1:6,24:30:71.70:624,72,0	1/1:2,24:26:69.04:632,69,0	1/1:0,13:13:33.02:302,33,0	1/1:4,25:29:75.01:680,75,0	1/1:2,16:18:45.02:412,45,0	1/1:1,9:11:29.85:261,30,0	1/1:4,10:14:24:219,24,0	1/1:2,26:28:72.04:659,72,0	1/1:0,19:19:47.98:439,48,0	1/1:1,24:25:63.03:577,63,0	1/1:1,22:23:62.87:562,63,0	1/1:0,20:20:54.03:494,54,0	1/1:1,18:19:51.02:466,51,0	1/1:1,6:7:15:137,15,0	1/1:4,17:22:49.90:431,50,0	1/1:2,26:29:71.99:651,72,0	1/1:4,11:15:24.48:221,24,0	1/1:1,18:19:50.97:458,51,0	1/1:1,18:19:54.01:488,54,0	1/1:2,15:17:45.02:412,45,0	1/1:1,18:19:42.01:384,42,0	1/1:2,17:19:50.90:453,51,0	1/1:2,13:15:36.01:329,36,0	1/1:0,10:10:27.01:247,27,0
chr10	81668626	.	C	CA	15573.25	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=6.674;DP=633;FS=15.971;HRun=4;HaplotypeScore=76.3012;InbreedingCoeff=0.9965;MQ=83.77;MQ0=0;MQRankSum=-3.766;QD=43.50;ReadPosRankSum=3.837;VQSLOD=2.7601;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.16:0,54,735	0/0:6,0:6:18.06:0,18,252	0/0:22,0:22:30.18:0,30,637	0/0:15,0:15:41.73:0,42,497	1/1:0,30:30:84.29:1342,84,0	0/0:27,0:27:81.27:0,81,1132	0/0:19,0:19:57.19:0,57,795	0/0:23,0:23:69.23:0,69,950	0/0:25,0:25:75.25:0,75,1048	1/1:1,35:36:99:1682,108,0	1/1:1,27:28:69.24:1103,69,0	0/0:14,0:14:33.10:0,33,445	0/0:29,0:29:81.27:0,81,1132	0/0:22,0:22:63.20:0,63,864	1/1:0,31:31:84.29:1343,84,0	1/1:0,25:25:69.24:1103,69,0	1/1:0,11:11:30.10:480,30,0	1/1:0,16:16:42.14:671,42,0	1/1:1,17:18:54.18:851,54,0	1/1:1,31:32:90.31:1439,90,0	1/1:0,27:27:72.25:1151,72,0	0/0:21,0:21:63.21:0,63,878	0/0:19,0:19:57.15:0,57,748	0/0:14,0:14:42.14:0,42,587	1/1:0,28:28:81.28:1295,81,0	1/1:0,34:34:99:1626,102,0	1/1:0,33:33:78:1247,78,0	1/1:0,9:9:15.05:240,15,0
chr10	81671407	.	GAA	G	9042.65	PASS	AB=0.889;AC=29;AF=0.518;AN=56;BaseQRankSum=8.475;DP=516;FS=1.176;HRun=6;HaplotypeScore=83.1276;InbreedingCoeff=0.9295;MQ=69.03;MQ0=0;MQRankSum=-5.238;QD=33.00;ReadPosRankSum=3.878;VQSLOD=4.6597;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1768	0/1:7,1:8:15.95:16,0,354	0/0:21,0:22:57.18:0,57,977	0/0:16,0:15:33.70:0,34,609	1/1:1,21:22:54.17:719,54,0	0/0:18,0:18:54.19:0,54,965	0/0:23,0:23:66.23:0,66,1180	0/0:25,0:25:66.23:0,66,1184	0/0:12,0:12:36.11:0,36,610	1/1:0,17:17:48.14:625,48,0	1/1:0,14:14:33.11:440,33,0	0/0:13,0:13:36.12:0,36,642	0/0:20,0:20:60.21:0,60,1074	0/0:14,0:14:42.14:0,42,757	1/1:1,24:25:63.20:839,63,0	1/1:0,19:19:45.15:600,45,0	1/1:1,36:37:96.32:1281,96,0	1/1:1,19:20:45.15:600,45,0	1/1:0,13:13:39.13:520,39,0	1/1:2,21:23:60.20:797,60,0	1/1:3,15:18:44.19:598,44,0	0/0:11,0:11:30.07:0,30,497	0/0:16,0:16:45.15:0,45,807	0/0:17,0:17:51.13:0,51,884	1/1:1,21:22:51.17:680,51,0	1/1:0,14:14:42.10:527,42,0	1/1:0,14:14:39.13:521,39,0	1/1:0,8:8:21.07:280,21,0
chr10	81671933	.	CATA	C	582.87	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=11.240;DP=551;FS=4.228;HRun=0;HaplotypeScore=214.3242;InbreedingCoeff=0.8525;MQ=48.95;MQ0=20;MQRankSum=-7.514;QD=2.67;ReadPosRankSum=2.804;VQSLOD=2.5551;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:40:61.97:0,62,1433	0/0:6,0:6:17.98:0,18,324	0/0:34,0:16:48.05:0,48,852	0/0:33,0:13:32.41:0,32,589	1/1:15,7:22:0.34:2,0,0	0/0:26,0:25:54.86:0,55,677	0/0:16,0:16:24.84:0,25,423	0/0:18,0:18:48.63:0,49,949	0/0:14,0:14:28.47:0,28,486	1/1:15,1:16:10.24:59,10,0	1/1:9,1:10:5.54:25,6,0	0/0:22,0:22:38.84:0,39,620	0/0:25,0:25:66.67:0,67,1313	0/0:20,0:21:38.97:0,39,765	1/1:18,7:25:16.81:111,17,0	1/1:23,7:30:12.16:62,12,0	1/1:8,6:13:17.08:126,17,0	1/1:2,1:3:5.13:30,5,0	1/1:6,1:7:8.13:39,8,0	1/1:14,8:21:11.02:56,11,0	0/1:13,0:10:0:0,0,0	0/0:24,0:23:47.88:0,48,976	0/0:15,0:15:20.53:0,21,359	0/0:30,0:30:32.76:0,33,747	1/1:13,5:17:11.75:79,12,0	1/1:15,4:18:14.19:101,14,0	1/1:15,4:19:13.07:95,13,0	0/0:6,0:6:1.52:0,2,3
chr10	81671935	.	TACACAC	T	2138.93	PASS	AC=32;AF=0.667;AN=48;BaseQRankSum=4.776;DP=555;FS=3.978;HRun=0;HaplotypeScore=228.8099;InbreedingCoeff=0.6822;MQ=47.59;MQ0=20;MQRankSum=-5.195;QD=7.04;ReadPosRankSum=1.566;VQSLOD=2.4792;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:42:32.16:0,32,1036	0/0:6,0:6:9.02:0,9,215	./.	0/0:33,0:13:0:0,0,0	1/1:22,0:22:2.98:21,3,0	1/1:22,3:24:39.09:640,39,0	0/0:15,0:15:10.26:0,10,150	0/0:17,0:17:5.39:0,5,95	1/1:15,2:16:8.99:142,9,0	1/1:15,0:15:3.01:42,3,0	./.	1/1:21,0:21:7.83:107,8,0	0/0:25,0:25:37.63:0,38,862	0/0:22,0:22:32.82:0,33,815	1/1:25,0:25:9.03:125,9,0	1/1:30,0:30:8.91:84,9,0	1/1:15,0:14:15.05:208,15,0	1/1:3,0:3:3.01:41,3,0	1/1:7,0:7:3.01:41,3,0	1/1:22,0:21:3.01:42,3,0	./.	0/0:25,0:24:30.04:0,30,750	1/1:15,0:15:2.99:48,3,0	1/1:30,1:31:17.47:306,17,0	1/1:18,0:17:9.03:125,9,0	1/1:19,0:18:12.04:167,12,0	1/1:19,0:19:12.04:167,12,0	./.
chr10	81671961	.	CACACACACACACACACAT	C	4013.88	PASS	AB=0.885;AC=26;AF=0.481;AN=54;BaseQRankSum=8.934;DP=400;FS=3.717;HRun=0;HaplotypeScore=201.7706;InbreedingCoeff=0.5308;MQ=51.12;MQ0=22;MQRankSum=-6.818;QD=29.95;ReadPosRankSum=-1.552;VQSLOD=2.3347;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:43:25.59:0,26,3273	0/0:4,0:4:12.04:0,12,759	0/0:14,0:8:23.98:0,24,352	0/0:31,0:10:17.94:0,18,224	0/1:1,6:7:7:153,0,7	0/0:23,0:23:27:0,27,1602	0/0:22,0:21:13.86:0,14,593	0/0:17,0:15:26.39:0,26,568	0/1:24,0:23:8.22:8,0,378	1/1:1,1:1:3.01:141,3,0	1/1:1,1:1:2.92:17,3,0	0/1:23,0:23:29.45:29,0,392	0/0:29,0:28:38.57:0,39,3001	0/0:30,0:30:34.01:0,34,2397	1/1:1,6:7:11.59:451,12,0	1/1:0,7:7:14.44:368,14,0	1/1:2,6:7:17.99:716,18,0	1/1:1,1:2:5.81:156,6,0	1/1:3,1:2:3.01:141,3,0	1/1:1,8:8:17.30:241,17,0	0/0:4,0:1:2.97:0,3,20	0/1:23,0:23:24.20:24,0,2210	0/0:16,0:16:3:0,3,410	0/0:28,0:28:3.19:0,3,1000	1/1:2,5:6:13.33:440,13,0	1/1:1,4:4:12.04:566,12,0	1/1:0,4:4:12.04:560,12,0	./.
chr10	81671975	.	CACAT	C	4368.65	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=7.755;DP=560;FS=9.535;HRun=0;HaplotypeScore=218.3410;InbreedingCoeff=0.2438;MQ=54.34;MQ0=15;MQRankSum=-5.268;QD=11.38;ReadPosRankSum=-1.560;VQSLOD=3.0718;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:40:5.22:0,5,526	0/0:4,0:4:12.02:0,12,194	0/0:16,0:14:27.62:0,28,275	0/0:22,0:16:9.92:0,10,159	0/1:20,0:20:48.30:171,0,48	1/1:16,7:23:27.80:588,28,0	0/0:23,0:22:7.15:0,7,42	0/0:28,0:25:10.82:0,11,106	1/1:26,1:26:11.45:107,11,0	0/1:21,0:20:1.16:1,0,124	1/1:16,0:15:15.77:278,16,0	1/1:4,19:23:19.11:181,19,0	0/1:25,0:24:13.53:14,0,420	0/0:33,0:33:29.78:0,30,423	1/1:22,0:22:62.67:611,63,0	1/1:24,0:24:37.97:493,38,0	0/1:11,0:10:12.58:215,0,13	0/1:7,0:7:36.95:95,0,37	0/1:11,0:9:35.01:35,0,70	1/1:22,0:21:42.43:418,42,0	0/1:15,0:13:31.49:93,0,31	0/1:23,0:23:30.89:31,0,367	1/1:2,10:12:1.92:10,2,0	1/1:28,2:30:21.13:236,21,0	1/1:16,0:15:41.93:440,42,0	0/1:25,0:24:99:137,0,118	0/1:11,0:11:7.88:215,0,8	0/0:8,0:5:9.27:0,9,41
chr10	81671979	.	T	TTC	7046.44	PASS	AB=0.977;AC=48;AF=0.857;AN=56;BaseQRankSum=3.866;DP=580;FS=27.839;HRun=0;HaplotypeScore=204.6093;InbreedingCoeff=0.5129;MQ=55.04;MQ0=15;MQRankSum=-4.874;QD=13.25;ReadPosRankSum=2.040;VQSLOD=3.2897;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,29:40:26.59:402,27,0	0/0:4,0:4:9.03:0,9,112	0/0:19,0:15:35.48:0,35,377	0/0:25,0:18:1.39:0,1,332	0/1:20,1:21:2.81:160,0,3	1/1:23,0:23:45.62:655,46,0	1/1:7,18:24:3.48:50,3,0	1/1:8,23:28:69.70:1111,70,0	1/1:7,20:27:8.89:108,9,0	1/1:21,0:20:56.29:516,56,0	1/1:16,0:15:27.74:146,28,0	1/1:21,3:24:20.89:298,21,0	1/1:10,16:25:28.30:394,28,0	1/1:10,23:36:7.92:254,8,0	1/1:22,0:22:56.50:284,57,0	1/1:24,0:24:64.52:397,65,0	1/1:11,0:10:19.45:95,19,0	1/1:8,0:8:19.66:145,20,0	0/1:11,0:9:23.28:86,0,23	1/1:22,0:21:45.22:305,45,0	1/1:15,0:13:2.58:124,3,0	1/1:5,22:27:27.09:381,27,0	1/1:12,0:12:5.82:84,6,0	1/1:9,19:28:14.62:202,15,0	1/1:15,0:15:35.45:166,35,0	1/1:25,0:24:29.37:463,29,0	1/1:11,0:11:13.36:110,13,0	1/1:8,0:5:12.02:113,12,0
chr10	81671987	.	C	CTCTCTCTT	21466.54	PASS	AB=0.955;AC=36;AF=0.643;AN=56;BaseQRankSum=-2.558;DP=669;FS=11.642;HRun=0;HaplotypeScore=212.3571;InbreedingCoeff=0.3192;MQ=58.23;MQ0=9;MQRankSum=-11.301;QD=40.97;ReadPosRankSum=-0.354;VQSLOD=3.1761;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:40:78.87:126,0,79	0/0:5,0:5:12.03:0,12,274	0/0:24,0:20:43.23:0,43,898	0/0:29,0:22:49.13:0,49,841	1/1:10,14:26:47.83:1172,48,0	0/1:23,0:23:65.51:66,0,216	0/0:25,0:25:11.92:0,12,93	0/0:35,0:32:19.91:0,20,496	0/1:29,0:29:49.71:85,0,50	1/1:3,21:26:78.16:2693,78,0	1/1:3,18:21:44.98:1348,45,0	0/1:27,0:27:69.55:70,0,127	0/0:26,0:25:21.18:0,21,200	0/1:36,0:36:54.41:54,0,170	1/1:8,19:33:63.22:2329,63,0	1/1:7,24:34:69.20:2758,69,0	1/1:8,8:17:30.02:802,30,0	1/1:2,6:9:23.21:591,23,0	0/1:7,7:15:35.84:1050,0,36	1/1:9,16:28:72.01:2280,72,0	1/1:6,14:19:1.01:486,1,0	0/1:28,0:28:69.01:69,0,100	1/1:9,0:9:5.58:47,6,0	0/1:26,0:26:68.36:68,0,70	1/1:8,11:20:43.03:1492,43,0	1/1:6,22:29:48.88:2658,49,0	1/1:5,8:15:24.05:707,24,0	1/1:2,5:6:12.04:515,12,0
chr10	81673449	.	GAC	G	393.04	PASS	AB=0.856;AC=14;AF=0.269;AN=52;BaseQRankSum=2.829;DP=443;FS=1.772;HRun=0;HaplotypeScore=72.0626;InbreedingCoeff=-0.2398;MQ=61.61;MQ0=7;MQRankSum=-1.354;QD=2.21;ReadPosRankSum=0.887;VQSLOD=1.5156;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,9:22:9.12:98,0,9	0/0:4,0:4:2.80:0,3,13	0/0:39,0:17:3.01:0,3,43	./.	./.	0/0:12,0:12:9.03:0,9,133	0/1:10,1:11:17.95:18,0,142	0/0:19,0:19:11.96:0,12,113	1/1:3,0:11:14.24:71,14,0	0/0:24,0:24:27.06:0,27,374	0/1:9,2:10:54.20:54,0,77	0/1:14,2:16:63.68:64,0,223	0/1:5,3:8:27.04:27,0,39	0/0:13,0:13:15.04:0,15,205	0/1:15,2:17:21.01:21,0,122	0/1:11,3:14:30.09:30,0,141	0/1:13,2:15:52.88:53,0,53	0/0:9,0:9:11.99:0,12,154	0/0:13,0:13:9.02:0,9,111	0/0:10,0:10:3:0,3,25	0/0:16,0:15:3.01:0,3,45	0/1:12,1:13:15.01:15,0,185	0/0:12,0:12:21.05:0,21,293	0/0:24,5:28:9.02:0,9,505	0/1:16,0:16:21:21,0,121	0/1:16,1:17:15.51:16,0,153	0/0:18,0:18:15.05:0,15,225	0/1:3,2:5:35.95:54,0,36
chr10	81673496	.	G	GGA	1511.39	PASS	AB=0.556;AC=21;AF=0.404;AN=52;BaseQRankSum=3.369;DP=357;FS=14.885;HRun=0;HaplotypeScore=60.2979;InbreedingCoeff=0.6974;MQ=42.14;MQ0=36;MQRankSum=-6.331;QD=14.26;ReadPosRankSum=0.628;VQSLOD=2.0977;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:15:17.99:0,18,223	0/0:6,0:6:3.44:0,3,42	0/0:32,0:11:2.23:0,2,265	0/0:37,0:9:23.41:0,23,252	./.	0/0:4,0:3:6.02:0,6,82	0/0:13,0:13:27.01:0,27,314	0/0:10,0:7:5.97:0,6,54	0/0:15,0:14:19.02:0,19,180	1/1:5,8:11:21.52:297,22,0	1/1:4,6:8:3:53,3,0	0/0:20,0:20:22.29:0,22,273	0/0:10,0:9:16.60:0,17,201	0/0:6,0:6:12.50:0,12,143	1/1:1,12:12:14.92:223,15,0	1/1:7,3:10:5.89:148,6,0	1/1:3,6:8:9.03:142,9,0	1/1:7,2:8:5.98:60,6,0	1/1:7,8:9:15.05:229,15,0	./.	0/0:13,8:15:2.90:0,3,16	0/0:17,0:17:42.13:0,42,542	0/0:7,0:6:15.05:0,15,206	0/0:17,0:16:30.09:0,30,395	1/1:2,2:4:6.02:97,6,0	1/1:4,6:9:4.32:152,4,0	0/1:2,8:10:4.55:172,0,5	1/1:1,2:3:9.03:121,9,0
chr10	81673498	.	AGAGG	A	790.40	PASS	AB=0.979;AC=20;AF=0.370;AN=54;BaseQRankSum=5.671;DP=354;FS=17.382;HRun=0;HaplotypeScore=62.0754;InbreedingCoeff=0.5867;MQ=41.92;MQ0=36;MQRankSum=-5.346;QD=6.81;ReadPosRankSum=1.187;VQSLOD=0.5467;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:16:21.05:0,21,433	0/0:5,0:5:4.78:0,5,84	0/0:35,0:11:24.61:0,25,584	0/0:40,0:9:26.71:0,27,472	0/1:10,1:8:0:0,0,0	0/0:4,0:3:6.02:0,6,140	0/0:13,0:13:27.64:0,28,418	0/0:11,0:8:14.51:0,15,151	0/0:13,0:12:23.90:0,24,322	1/1:12,1:11:18.27:144,18,0	1/1:9,0:7:3:28,3,0	0/0:19,0:19:26.68:0,27,490	0/0:8,0:7:16.61:0,17,326	0/0:6,0:6:14.92:0,15,217	1/1:13,0:12:12.41:146,12,0	0/1:10,0:10:14.12:62,0,14	1/1:7,2:8:8.97:104,9,0	1/1:9,0:8:5.98:60,6,0	1/1:15,0:9:14.60:121,15,0	./.	0/0:19,1:14:3.01:0,3,36	0/0:17,0:17:44.81:0,45,723	0/0:6,0:5:15.05:0,15,329	0/0:16,0:15:30.09:0,30,647	1/1:2,2:4:6:60,6,0	0/1:10,0:9:10.90:91,0,11	0/1:10,0:10:22.30:70,0,22	1/1:2,1:3:9.01:85,9,0
chr10	81673533	.	AGAAG	A	102.12	PASS	AB=0.762;AC=8;AF=0.182;AN=44;BaseQRankSum=2.458;DP=275;FS=0.000;HRun=0;HaplotypeScore=31.6795;InbreedingCoeff=0.3586;MQ=33.61;MQ0=74;MQRankSum=-2.307;QD=3.78;ReadPosRankSum=-1.938;VQSLOD=0.5986;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:8:11.91:0,12,215	0/0:3,0:3:9.03:0,9,191	0/0:43,0:8:3.05:0,3,221	0/0:68,0:11:13.49:0,13,235	./.	0/0:7,0:4:9.03:0,9,149	0/0:11,0:8:1.29:0,1,295	0/0:17,0:13:15.96:0,16,459	0/0:8,0:6:9.03:0,9,185	./.	1/1:2,0:2:1.25:3,1,0	0/0:4,0:1:3:0,3,25	0/0:5,0:5:11.94:0,12,222	0/0:4,0:2:3.01:0,3,67	./.	0/0:4,1:4:0:0,0,0	1/1:6,2:6:3.48:53,3,0	0/0:3,0:1:0.47:0,0,1	0/1:5,1:2:45.90:46,0,63	./.	0/0:15,2:6:2.53:0,3,10	0/0:12,0:12:30.06:0,30,534	0/0:4,0:4:5.89:0,6,37	0/0:9,0:5:12.04:0,12,255	0/1:2,2:3:0:0,0,0	1/1:5,2:3:6.02:103,6,0	./.	./.
chr10	81673593	.	AGAGG	A	129.71	PASS	AB=0.914;AC=10;AF=0.227;AN=44;BaseQRankSum=3.652;DP=164;FS=57.855;HRun=0;HaplotypeScore=23.6702;InbreedingCoeff=-0.0534;MQ=33.19;MQ0=57;MQRankSum=-2.431;QD=3.33;ReadPosRankSum=1.636;VQSLOD=-0.0042;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:3:9.01:0,9,105	./.	./.	./.	./.	0/0:13,0:6:15.01:0,15,172	0/1:8,0:3:7.68:8,0,73	0/0:13,0:3:9.03:0,9,123	0/0:14,1:10:26.98:0,27,345	0/1:6,1:3:36.61:37,0,73	0/0:1,0:1:3.01:0,3,41	0/0:7,0:3:7.27:0,7,81	./.	0/0:2,0:1:3.01:0,3,34	0/0:5,0:3:9.03:0,9,123	0/0:7,0:2:6.02:0,6,82	1/1:4,0:2:2.34:12,2,0	0/1:5,0:3:33.91:39,0,34	./.	0/0:4,0:1:3.01:0,3,41	0/0:23,0:11:18.92:0,19,225	0/0:2,0:1:3.01:0,3,41	0/0:4,0:1:2.97:0,3,20	0/0:6,0:5:15.05:0,15,205	0/1:4,0:4:19.38:19,0,32	0/1:5,1:3:41.99:42,0,72	0/1:2,1:3:32.18:51,0,32	1/1:2,0:1:3.01:44,3,0
chr10	81673599	.	AGAGG	A	122.22	PASS	AB=0.820;AC=4;AF=0.083;AN=48;BaseQRankSum=3.678;DP=215;FS=39.784;HRun=0;HaplotypeScore=30.6188;InbreedingCoeff=-0.1235;MQ=37.61;MQ0=63;MQRankSum=-4.250;QD=4.89;ReadPosRankSum=3.615;VQSLOD=0.8018;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:4:12.04:0,12,167	0/0:2,0:1:3.01:0,3,41	./.	./.	./.	0/0:14,0:8:21.07:0,21,295	0/0:8,0:3:9.03:0,9,123	0/0:19,0:7:21.07:0,21,288	0/0:18,0:13:36.12:0,36,493	0/0:7,0:3:6.02:0,6,83	0/0:1,0:1:3.01:0,3,41	0/0:10,0:6:17.95:0,18,219	0/0:6,0:3:9.03:0,9,124	0/0:3,0:2:3.48:0,3,42	0/0:7,0:5:15.05:0,15,206	0/0:10,0:5:15.05:0,15,205	0/1:5,1:4:28.11:54,0,28	0/1:9,1:7:26.85:27,0,162	./.	0/0:7,0:3:9.03:0,9,123	0/0:29,0:14:26.73:0,27,351	0/0:3,0:2:6.02:0,6,82	0/0:5,0:2:3.01:0,3,41	0/0:8,0:6:18.06:0,18,244	0/1:3,2:5:32.64:93,0,33	0/0:8,0:5:2.41:0,2,119	0/1:3,1:4:51.77:52,0,71	0/0:2,0:1:1.82:0,2,5
chr10	81674533	.	G	GTTT	14974.63	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=0.890;DP=655;FS=5.952;HRun=4;HaplotypeScore=99.0045;InbreedingCoeff=0.9987;MQ=63.98;MQ0=7;MQRankSum=-1.825;QD=50.08;ReadPosRankSum=2.119;VQSLOD=4.1220;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.13:0,48,682	0/0:10,0:10:30.10:0,30,460	0/0:43,0:29:63.21:0,63,1037	0/0:46,0:29:75.61:0,76,1008	1/1:6,19:25:60.16:1212,60,0	0/0:32,0:32:93.28:0,93,1378	0/0:14,0:14:42.11:0,42,600	0/0:32,0:32:81.19:0,81,1127	0/0:17,0:17:45.15:0,45,688	1/1:3,27:31:84.22:1564,84,0	1/1:4,19:24:57.15:1198,57,0	0/0:29,0:29:78.22:0,78,1130	0/0:20,0:20:54.18:0,54,818	0/0:26,0:26:66.22:0,66,1011	1/1:0,27:27:63.22:1407,63,0	1/1:2,14:17:39.13:870,39,0	1/1:2,16:18:38.49:812,38,0	1/1:5,13:18:32.96:621,33,0	1/1:4,12:17:45.11:749,45,0	1/1:2,26:28:75.17:1537,75,0	1/1:2,11:13:33.07:673,33,0	0/0:19,0:19:51.15:0,51,757	0/0:17,0:17:51.15:0,51,758	0/0:32,0:31:90.03:0,90,1259	1/1:1,20:20:45.15:1005,45,0	1/1:2,27:29:84.29:1786,84,0	1/1:1,22:23:51.18:1138,51,0	1/1:0,6:6:18.06:402,18,0
chr10	81675068	.	AT	A	8584.37	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=13.153;DP=553;FS=5.535;HRun=7;HaplotypeScore=53.3458;InbreedingCoeff=0.9959;MQ=78.84;MQ0=0;MQRankSum=-2.021;QD=27.34;ReadPosRankSum=2.816;VQSLOD=5.6490;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.15:0,48,604	0/0:5,0:5:15.05:0,15,189	0/0:17,0:18:39.12:0,39,471	0/0:9,0:9:24.04:0,24,270	1/1:3,31:34:87.19:888,87,0	0/0:27,0:27:78.25:0,78,981	0/0:16,0:16:39.12:0,39,491	0/0:43,0:43:99:0,114,1409	0/0:12,0:12:36.11:0,36,450	1/1:1,34:35:99:1026,102,0	1/1:2,39:41:99:1162,114,0	0/0:9,0:9:27.09:0,27,340	0/0:21,0:21:57.18:0,57,717	0/0:15,0:15:42.13:0,42,518	1/1:2,21:23:57.12:581,57,0	1/1:2,18:20:54.12:551,54,0	1/1:0,22:22:57.13:582,57,0	1/1:1,9:10:21.05:214,21,0	1/1:0,13:13:39.09:398,39,0	1/1:1,20:21:57.13:582,57,0	1/1:0,8:8:24.05:245,24,0	0/0:18,0:18:54.14:0,54,653	0/0:22,0:22:63.19:0,63,780	0/0:7,0:7:21.07:0,21,264	1/1:3,25:28:66.15:673,66,0	1/1:1,20:21:60.14:612,60,0	1/1:0,26:26:75.17:765,75,0	1/1:2,10:12:30.06:306,30,0
chr10	81676157	.	TG	T	5174.30	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=11.936;DP=366;FS=2.186;HRun=7;HaplotypeScore=46.8156;InbreedingCoeff=0.9183;MQ=71.43;MQ0=0;MQRankSum=-0.745;QD=24.52;ReadPosRankSum=4.117;VQSLOD=5.0592;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:21.01:0,21,233	0/0:5,0:5:15.04:0,15,176	0/0:9,0:9:24.02:0,24,267	0/1:9,0:8:7.99:8,0,148	1/1:0,16:16:48.11:489,48,0	0/0:19,0:19:51.15:0,51,628	0/0:7,0:7:12.02:0,12,137	0/0:27,0:27:66.17:0,66,791	0/0:10,0:10:30.06:0,30,339	1/1:1,22:24:68.58:669,69,0	1/1:0,16:16:45.10:459,45,0	0/0:12,0:12:36.10:0,36,440	0/0:18,0:18:45.13:0,45,543	0/0:10,0:10:30.09:0,30,366	1/1:2,12:14:33.08:337,33,0	1/1:0,8:8:15.03:153,15,0	1/1:3,17:20:48.11:490,48,0	1/1:2,8:10:21.05:214,21,0	1/1:2,12:14:36.08:367,36,0	1/1:3,11:14:33.07:337,33,0	1/1:0,6:6:12.03:122,12,0	0/0:5,0:5:12.04:0,12,151	0/0:13,0:13:27.08:0,27,328	0/0:10,0:10:30.09:0,30,365	1/1:1,9:10:21.05:214,21,0	1/1:0,7:7:21.05:214,21,0	1/1:3,27:30:69.15:704,69,0	1/1:0,13:13:39.09:398,39,0
chr10	81676473	.	TATATATATATATATATATATAGAGAGAGAGAG	T	3842.37	PASS	AB=1.000;AC=23;AF=0.523;AN=44;BaseQRankSum=-2.369;DP=173;FS=0.000;HRun=0;HaplotypeScore=163.3183;InbreedingCoeff=0.0419;MQ=52.72;MQ0=4;MQRankSum=1.766;QD=29.33;ReadPosRankSum=1.164;VQSLOD=2.5548;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:2:0:0,0,0	0/0:1,0:1:3.01:0,3,198	0/0:2,0:2:3.01:0,3,100	0/0:8,0:5:6.01:0,6,107	0/0:10,0:10:3.01:0,3,38	0/1:7,0:7:6.73:50,0,7	1/1:4,0:4:6:78,6,0	1/1:6,31:35:93.13:2238,93,0	1/1:5,0:5:3.01:54,3,0	1/1:8,0:8:0.89:164,1,0	0/0:5,0:5:2.98:0,3,22	./.	1/1:5,0:5:9.03:135,9,0	./.	0/0:3,0:3:5.93:0,6,40	0/1:9,0:8:2.02:173,0,2	1/1:5,0:5:2.89:87,3,0	0/1:5,0:5:99:137,0,101	0/1:12,0:12:99:186,0,143	./.	1/1:3,0:3:3:29,3,0	./.	./.	./.	1/1:7,0:7:6.49:123,6,0	0/1:9,0:9:99:322,0,433	0/1:9,0:8:54.05:54,0,114	0/1:6,0:6:13.69:14,0,146
chr10	81676475	.	TATATATATATATATATATAGAG	T	1285.14	PASS	AB=1.000;AC=22;AF=0.500;AN=44;BaseQRankSum=1.783;DP=170;FS=3.302;HRun=0;HaplotypeScore=142.3152;InbreedingCoeff=0.0426;MQ=56.34;MQ0=3;MQRankSum=1.518;QD=10.45;ReadPosRankSum=1.827;VQSLOD=2.7490;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:2:0:0,0,0	0/0:1,0:1:3.01:0,3,80	0/0:2,0:2:3.01:0,3,146	0/0:9,0:7:3.30:0,3,52	0/0:10,0:10:2.90:0,3,16	1/1:4,3:7:3.48:124,3,0	0/0:3,0:3:2.80:0,3,13	1/1:34,0:32:67.99:473,68,0	1/1:3,2:5:3.01:124,3,0	0/1:8,0:8:36.63:37,0,93	1/1:5,0:5:0.47:1,0,0	./.	1/1:5,0:5:4.40:50,4,0	./.	0/0:2,0:2:3:0,3,25	0/1:9,0:8:27.74:98,0,28	1/1:5,0:5:2.99:50,3,0	0/1:5,0:5:58.17:58,0,77	0/1:12,0:12:99:104,0,124	./.	1/1:3,0:3:3.01:34,3,0	./.	./.	./.	1/1:7,0:7:6.49:90,6,0	0/1:9,0:9:99:146,0,225	0/1:9,0:8:27.42:27,0,30	0/0:6,0:6:8.84:0,9,76
chr10	81676481	.	TATATATATATATAGAGAGAGAGAGAGAGAG	T	3088.35	PASS	AB=1.000;AC=25;AF=0.625;AN=40;BaseQRankSum=-1.878;DP=177;FS=0.000;HRun=0;HaplotypeScore=153.2268;InbreedingCoeff=0.0966;MQ=61.16;MQ0=3;MQRankSum=-1.011;QD=23.76;ReadPosRankSum=2.755;VQSLOD=2.6055;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:1,0:1:3.01:0,3,234	0/0:4,0:1:3.01:0,3,53	0/0:12,0:10:8.75:0,9,62	1/1:10,0:10:2.97:20,3,0	1/1:5,0:5:4.24:27,4,0	0/0:4,0:4:2.51:0,3,11	0/1:34,0:32:99:426,0,157	1/1:6,0:6:3:25,3,0	1/1:9,0:9:18.06:403,18,0	./.	./.	0/0:3,0:3:2.97:0,3,20	./.	1/1:3,0:3:6.46:51,6,0	1/1:9,0:8:7.95:322,8,0	1/1:6,0:6:2.07:138,2,0	0/1:5,0:5:20.34:228,0,20	1/1:7,0:7:18.06:482,18,0	./.	1/1:4,0:4:3.01:92,3,0	./.	./.	./.	1/1:7,0:7:6.49:240,6,0	0/1:10,0:9:99:512,0,213	0/1:9,0:8:12.83:157,0,13	0/1:6,0:6:38.51:98,0,39
chr10	81676493	.	TAGAGAGAGAGAGAGAGAG	T	3562.53	PASS	AB=1.000;AC=29;AF=0.763;AN=38;BaseQRankSum=1.711;DP=242;FS=0.000;HRun=0;HaplotypeScore=139.6490;InbreedingCoeff=0.3225;MQ=67.05;MQ0=7;MQRankSum=-4.603;QD=21.08;ReadPosRankSum=3.589;VQSLOD=2.2322;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:5:5.92:0,6,353	0/0:2,0:2:3.01:0,3,189	0/0:20,0:3:3.01:0,3,71	0/1:32,0:18:9.94:10,0,151	./.	1/1:7,0:7:0.47:1,0,0	1/1:3,0:3:0.47:1,0,0	0/1:33,0:32:99:416,0,125	./.	1/1:2,7:9:11.93:284,12,0	./.	./.	./.	1/1:3,0:3:3.01:52,3,0	0/1:3,0:3:0:0,0,0	1/1:11,0:10:4.64:214,5,0	1/1:6,0:6:0.74:100,1,0	1/1:4,0:4:12.04:262,12,0	1/1:8,0:8:21.07:538,21,0	./.	1/1:4,0:4:3.01:93,3,0	./.	./.	./.	1/1:6,0:6:6.49:206,6,0	1/1:13,0:12:34.53:721,35,0	1/1:13,0:12:18.06:424,18,0	1/1:14,0:14:17.94:242,18,0
chr10	81676505	.	GAGAGAGAGATATAGATAT	G	614.55	PASS	AB=1.000;AC=15;AF=0.341;AN=44;BaseQRankSum=4.189;DP=293;FS=0.000;HRun=0;HaplotypeScore=156.6547;InbreedingCoeff=-0.2467;MQ=63.76;MQ0=11;MQRankSum=0.677;QD=3.43;ReadPosRankSum=2.745;VQSLOD=2.6469;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:5:12.04:0,12,426	0/0:2,0:2:3.01:0,3,244	0/0:42,0:6:11.96:0,12,109	0/1:49,0:22:4.85:5,0,221	./.	1/1:8,0:8:0.47:1,0,0	0/1:1,0:1:0:0,0,0	0/1:40,0:38:99:412,0,870	./.	0/1:7,0:7:20.08:20,0,31	./.	./.	0/0:3,0:3:3.01:0,3,73	0/0:3,0:3:2.92:0,3,17	0/0:3,0:3:5.61:0,6,69	0/1:12,0:11:50.64:51,0,142	0/1:7,0:7:29.37:29,0,30	0/1:6,0:6:23.64:24,0,68	0/1:6,0:6:45.94:64,0,46	0/0:10,0:10:3.01:0,3,36	1/1:4,0:4:2.99:24,3,0	./.	0/0:0,3:3:0:0,0,0	./.	0/1:9,0:9:46.62:47,0,133	0/1:17,0:16:37.64:38,0,411	0/1:13,0:12:21.13:21,0,88	0/0:14,0:14:32.54:0,33,424
chr10	81676507	.	GAGAGAGATATAGATAT	G	106.83	PASS	AB=1.000;AC=7;AF=0.146;AN=48;BaseQRankSum=4.833;DP=294;FS=2.205;HRun=0;HaplotypeScore=153.0131;InbreedingCoeff=0.1746;MQ=63.75;MQ0=11;MQRankSum=1.042;QD=1.67;ReadPosRankSum=2.459;VQSLOD=2.9533;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:5:12.04:0,12,339	0/0:2,0:2:3.01:0,3,224	0/0:42,0:6:7.79:0,8,66	0/0:49,0:22:5.36:0,5,167	./.	1/1:3,6:9:0.47:1,0,0	0/0:2,0:2:2.68:0,3,75	0/1:39,0:37:99:171,0,916	0/0:3,3:6:0:0,0,0	0/0:7,0:7:1.05:0,1,70	./.	./.	0/0:3,0:3:3.01:0,3,97	0/0:3,0:3:3:0,3,35	0/0:3,0:3:5.57:0,6,69	0/0:12,0:11:15.02:0,15,163	0/0:7,0:7:3.48:0,3,37	0/0:6,0:6:9.59:0,10,143	0/0:6,0:6:4.37:0,4,113	0/0:10,0:10:3.01:0,3,36	1/1:4,0:4:2.94:18,3,0	./.	0/1:3,0:3:0:0,0,0	0/0:0,3:3:0:0,0,0	0/1:9,0:9:6.73:7,0,162	0/0:17,0:16:31.73:0,32,641	0/0:13,0:12:13.77:0,14,184	0/0:14,0:14:36.05:0,36,497
chr10	81677166	.	T	TA	11094.82	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=17.622;DP=627;FS=0.973;HRun=4;HaplotypeScore=105.2635;InbreedingCoeff=0.9951;MQ=71.31;MQ0=1;MQRankSum=-2.683;QD=35.11;ReadPosRankSum=3.527;VQSLOD=4.4002;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:30.09:0,30,340	0/0:14,0:14:39.09:0,39,430	0/0:19,0:19:23.95:0,24,394	0/0:18,0:19:55.34:0,55,567	1/1:2,22:24:63.21:861,63,0	0/0:26,0:26:72.17:0,72,796	0/0:13,0:13:33.09:0,33,374	0/0:39,0:39:99:0,108,1209	0/0:21,0:21:63.16:0,63,704	1/1:2,36:38:99:1394,102,0	1/1:2,26:28:78.25:1052,78,0	0/0:23,0:23:66.17:0,66,737	0/0:26,0:26:69.19:0,69,782	0/0:27,0:27:75.21:0,75,851	1/1:3,30:34:84.15:1130,84,0	1/1:2,18:20:47.95:656,48,0	1/1:3,18:21:44.74:615,45,0	1/1:3,13:16:42.13:561,42,0	1/1:2,12:13:36.12:492,36,0	1/1:0,21:21:60.20:820,60,0	1/1:2,9:11:24.08:328,24,0	0/0:25,0:25:63.16:0,63,701	0/0:33,0:33:93.25:0,93,1045	0/0:16,0:16:45.13:0,45,509	1/1:2,22:24:66.22:903,66,0	1/1:2,26:28:81.26:1091,81,0	1/1:6,27:33:75.25:1026,75,0	1/1:0,4:4:12.04:164,12,0
chr10	81678564	.	G	GA	3644.91	PASS	AB=0.909;AC=11;AF=0.196;AN=56;BaseQRankSum=-9.498;DP=552;FS=2.962;HRun=7;HaplotypeScore=65.7036;InbreedingCoeff=0.8932;MQ=86.66;MQ0=0;MQRankSum=-1.350;QD=30.12;ReadPosRankSum=-1.549;VQSLOD=3.6135;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:42.06:0,42,405	0/0:6,0:6:15.02:0,15,145	0/0:18,0:18:38.87:0,39,350	0/0:19,0:19:22.45:0,22,328	0/0:21,0:21:48.07:0,48,463	0/0:15,0:15:45.07:0,45,435	1/1:0,12:12:33.10:399,33,0	1/1:0,35:35:99:1244,105,0	0/0:21,0:21:63.10:0,63,608	0/0:25,0:25:72.11:0,72,695	0/0:28,0:28:75.11:0,75,724	0/0:25,0:25:72.12:0,72,695	1/1:1,27:28:72.22:870,72,0	1/1:3,19:22:54.17:652,54,0	0/0:21,0:21:60.09:0,60,579	0/0:18,0:18:51.08:0,51,493	0/0:9,0:9:21.02:0,21,203	0/1:9,1:10:9.18:9,0,205	0/0:15,0:15:39.06:0,39,377	0/0:25,0:25:63.10:0,63,608	0/0:13,0:13:39.05:0,39,371	1/1:1,13:14:39.12:471,39,0	0/0:20,0:20:54.09:0,54,522	0/0:14,0:14:33.01:0,33,305	0/0:20,0:19:57.09:0,57,550	0/0:36,0:36:99:0,99,950	0/0:33,0:32:90.11:0,90,856	0/0:9,0:9:27.04:0,27,261
chr10	81680045	.	T	TACACACACACACACACACACA	16932.56	PASS	AB=0.677;AC=40;AF=0.714;AN=56;BaseQRankSum=2.472;DP=560;FS=1.765;HRun=0;HaplotypeScore=339.5801;InbreedingCoeff=0.6831;MQ=57.45;MQ0=2;MQRankSum=-5.309;QD=39.20;ReadPosRankSum=3.298;VQSLOD=3.0738;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:39.13:0,39,1839	0/0:10,0:11:30.10:0,30,1685	0/0:23,0:17:17.16:0,17,454	0/0:26,0:21:30.09:0,30,1141	1/1:23,0:25:1.27:211,1,0	1/1:17,0:25:26.63:426,27,0	0/0:6,0:8:4.46:0,4,32	0/1:27,0:43:6.61:7,0,794	1/1:5,0:15:17.73:261,18,0	1/1:16,0:14:23.29:1379,23,0	1/1:18,0:17:1.82:5,2,0	1/1:6,0:9:11.99:169,12,0	0/1:8,0:20:12.97:13,0,153	0/0:7,0:17:15.02:0,15,142	1/1:14,0:14:5.23:67,5,0	1/1:20,0:20:18:983,18,0	1/1:28,0:27:38.76:1656,39,0	1/1:9,0:9:18.53:1081,19,0	1/1:13,0:13:33.11:1832,33,0	1/1:26,0:26:17.32:1085,17,0	1/1:13,0:13:5.25:185,5,0	0/0:4,0:11:6.48:0,6,58	1/1:20,0:31:29.55:453,30,0	1/1:15,0:18:14.31:235,14,0	1/1:28,1:33:12.21:1092,12,0	1/1:26,0:25:66.10:3229,66,0	1/1:23,0:25:30.10:1997,30,0	1/1:3,0:4:9.03:563,9,0
chr10	81681066	.	G	GA	4052.20	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-6.551;DP=640;FS=4.150;HRun=5;HaplotypeScore=78.8813;InbreedingCoeff=0.9981;MQ=66.47;MQ0=0;MQRankSum=-0.351;QD=32.16;ReadPosRankSum=-1.220;VQSLOD=3.7673;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.21:0,90,959	0/0:14,0:14:42.11:0,42,451	0/0:13,0:12:36.07:0,36,375	0/0:22,0:19:29.82:0,30,322	0/0:27,0:27:63.16:0,63,677	0/0:35,0:35:93.21:0,93,991	1/1:3,10:13:27.09:355,27,0	1/1:4,34:38:99:1272,99,0	0/0:20,0:20:48.10:0,48,506	0/0:28,0:28:81.19:0,81,864	0/0:30,0:30:81.18:0,81,862	0/0:23,0:23:66.16:0,66,702	1/1:2,23:25:66.21:858,66,0	1/1:2,19:21:48.16:632,48,0	0/0:21,0:21:54.13:0,54,580	0/0:20,0:20:57.14:0,57,613	0/0:26,0:25:63.16:0,63,676	0/0:18,0:18:39.07:0,39,408	0/0:17,0:17:42.11:0,42,452	0/0:21,0:21:60.15:0,60,645	0/0:8,0:8:24.06:0,24,258	1/1:2,27:29:72.23:935,72,0	0/0:31,0:31:78.19:0,78,838	0/0:16,0:16:45.11:0,45,483	0/0:32,0:32:93.23:0,93,999	0/0:21,0:21:63.16:0,63,677	0/0:34,0:33:96.24:0,96,1030	0/0:7,0:7:21.05:0,21,226
chr10	81681227	.	C	CA	3190.04	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-11.574;DP=591;FS=3.267;HRun=4;HaplotypeScore=52.7210;InbreedingCoeff=0.9959;MQ=76.34;MQ0=0;MQRankSum=-0.635;QD=34.30;ReadPosRankSum=2.762;VQSLOD=4.3015;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.14:0,51,579	0/0:6,0:6:15.04:0,15,170	0/0:14,0:14:36.09:0,36,397	0/0:11,0:11:27.05:0,27,290	0/0:35,0:35:99:0,99,1122	1/1:0,16:16:39.13:534,39,0	0/0:15,0:15:36.10:0,36,408	0/0:46,0:46:99:0,123,1380	1/1:1,18:19:48.16:657,48,0	0/0:25,0:25:72.20:0,72,817	0/0:26,0:26:69.18:0,69,774	1/1:1,17:18:48.16:657,48,0	0/0:28,0:28:75.20:0,75,841	0/0:24,0:24:63.16:0,63,705	0/0:23,0:23:69.18:0,69,772	0/0:24,0:24:57.16:0,57,647	0/0:23,0:23:60.17:0,60,680	0/0:14,0:14:39.11:0,39,442	0/0:15,0:15:39.10:0,39,433	0/0:39,0:39:99:0,108,1225	0/0:20,0:20:51.13:0,51,569	0/0:14,0:14:36.08:0,36,397	1/1:1,21:22:60.20:821,60,0	1/1:1,17:18:51.17:698,51,0	0/0:19,0:19:54.15:0,54,613	0/0:18,0:18:45.13:0,45,510	0/0:30,0:30:84.24:0,84,952	0/0:11,0:11:33.07:0,33,362
chr10	81682645	.	T	TAA	14661.87	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-12.139;DP=480;FS=1.299;HRun=7;HaplotypeScore=48.6390;InbreedingCoeff=0.9512;MQ=69.60;MQ0=1;MQRankSum=-3.325;QD=42.13;ReadPosRankSum=-0.694;VQSLOD=3.8912;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:16:45.13:0,45,520	0/0:9,0:9:21.06:0,21,245	0/0:10,0:10:21.03:0,21,232	0/0:8,0:7:8.49:0,8,130	1/1:5,30:35:87.18:1322,87,0	0/0:26,0:25:63.16:0,63,721	1/1:1,3:4:9.03:148,9,0	1/1:7,23:30:69.24:1130,69,0	0/0:14,0:14:42.12:0,42,489	1/1:1,21:22:63.20:995,63,0	1/1:1,18:18:48.12:758,48,0	0/0:15,0:15:39.11:0,39,455	1/1:1,14:16:45.15:730,45,0	1/1:1,17:18:45.15:738,45,0	1/1:0,18:18:54.18:886,54,0	1/1:4,13:17:4.21:556,4,0	1/1:1,11:12:33.11:541,33,0	1/1:0,11:11:33.11:542,33,0	1/1:4,12:16:36.12:579,36,0	1/1:1,30:31:87.23:1362,87,0	1/1:0,4:4:12.04:197,12,0	1/1:1,6:7:18.06:295,18,0	0/0:21,0:21:54.14:0,54,623	0/0:13,0:13:39.12:0,39,454	1/1:1,27:28:75.26:1231,75,0	1/1:2,21:23:63.21:1026,63,0	1/1:1,23:25:63.22:1034,63,0	1/1:0,12:12:36.12:591,36,0
chr10	81684615	.	TAA	T	8304.98	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=17.171;DP=576;FS=1.870;HRun=10;HaplotypeScore=143.1008;InbreedingCoeff=0.9864;MQ=68.52;MQ0=1;MQRankSum=-8.136;QD=28.44;ReadPosRankSum=2.679;VQSLOD=3.7951;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.29:0,84,1305	0/0:11,0:11:33.10:0,33,503	0/0:17,0:16:30.69:0,31,412	0/0:14,0:13:21.73:0,22,266	1/1:2,26:28:69.18:763,69,0	0/0:1,0:22:52.40:0,52,180	0/0:3,0:14:27.45:0,27,94	0/0:8,0:28:42.92:0,43,218	0/0:0,0:26:59.89:0,60,206	1/1:5,31:36:99:1100,99,0	1/1:1,23:24:69.18:769,69,0	0/0:1,0:21:37.43:0,37,129	0/0:3,0:24:52.40:0,52,180	0/0:3,0:16:32.44:0,32,112	1/1:3,21:27:74.67:791,75,0	1/1:1,17:20:41.98:583,42,0	1/1:5,9:14:30.07:329,30,0	1/1:1,7:8:21.02:220,21,0	1/1:9,12:21:39.06:434,39,0	1/1:6,20:26:63.15:692,63,0	1/1:1,4:5:12.03:132,12,0	0/0:3,0:17:34.48:0,34,118	0/0:1,0:23:52.28:0,52,180	0/0:3,0:19:39.93:0,40,137	1/1:2,23:25:66.17:732,66,0	1/1:7,26:33:84.20:926,84,0	1/1:1,21:22:66.18:734,66,0	1/1:0,3:3:9.02:100,9,0
chr10	81684685	.	TA	T	11371.35	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=10.806;DP=636;FS=14.993;HRun=3;HaplotypeScore=89.5664;InbreedingCoeff=0.9919;MQ=81.02;MQ0=0;MQRankSum=-3.837;QD=33.06;ReadPosRankSum=3.815;VQSLOD=3.6519;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.23:0,69,991	0/0:9,0:9:27.09:0,27,388	0/0:19,0:19:51.13:0,51,683	0/0:17,0:17:48.07:0,48,592	1/1:1,32:33:90.28:1115,90,0	0/0:23,0:23:66.20:0,66,915	0/0:24,0:24:72.24:0,72,1035	0/0:20,0:20:60.19:0,60,832	0/0:23,0:23:69.23:0,69,993	1/1:3,39:42:99:1446,117,0	1/1:1,22:23:51.16:632,51,0	0/0:20,0:20:54.18:0,54,775	0/0:27,0:27:78.26:0,78,1121	0/0:22,0:22:66.22:0,66,950	1/1:2,24:26:69.21:850,69,0	1/1:1,19:20:57.18:704,57,0	1/1:1,23:24:66.21:818,66,0	1/1:0,16:16:48.15:595,48,0	1/1:1,20:21:60.18:732,60,0	1/1:3,36:39:96.30:1189,96,0	1/1:0,15:15:33.10:409,33,0	0/0:15,0:15:45.14:0,45,630	0/0:27,0:27:75.24:0,75,1062	0/0:22,0:22:66.22:0,66,951	1/1:0,23:23:63.20:781,63,0	1/1:4,27:31:81.25:1003,81,0	1/1:2,26:28:81.23:989,81,0	1/1:0,3:3:9.03:110,9,0
chr10	81686500	.	GTGT	G	3122.02	PASS	AB=0.909;AC=9;AF=0.161;AN=56;BaseQRankSum=11.508;DP=920;FS=1.406;HRun=0;HaplotypeScore=136.4315;InbreedingCoeff=0.8970;MQ=62.56;MQ0=5;MQRankSum=-7.034;QD=24.58;ReadPosRankSum=1.614;VQSLOD=3.5561;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:80.63:0,81,2166	0/0:16,0:16:48.16:0,48,986	0/0:40,0:25:21.23:0,21,654	0/0:46,0:31:59.45:0,59,1061	0/0:34,0:34:78.26:0,78,1484	0/0:26,0:26:69.20:0,69,1351	1/1:10,15:20:42.13:585,42,0	0/0:29,0:29:60.21:0,60,1226	0/0:36,1:37:43.64:0,44,1680	0/0:47,0:46:99:0,105,2109	0/0:13,0:13:18.06:0,18,368	0/0:43,0:43:99:0,108,2131	1/1:8,17:25:60.20:865,60,0	1/1:8,15:22:45.15:654,45,0	0/0:44,0:44:99:0,117,2300	0/0:40,0:40:96.33:0,96,1936	0/0:33,0:33:63.29:0,63,1541	0/0:28,0:28:66.14:0,66,1285	0/0:39,0:37:78.26:0,78,1478	0/0:21,0:21:36.12:0,36,740	0/0:38,0:37:90.29:0,90,1787	1/1:10,24:34:81.27:1175,81,0	0/1:18,2:20:4.51:5,0,698	0/0:55,0:55:99:0,150,2895	0/0:23,0:23:69.22:0,69,1372	0/0:34,0:33:72.24:0,72,1397	0/0:34,0:34:81.28:0,81,1631	0/0:21,0:21:54.66:0,55,1085
chr10	81686552	.	CCGT	C	1659.46	PASS	AB=0.822;AC=6;AF=0.107;AN=56;BaseQRankSum=12.172;DP=920;FS=6.892;HRun=0;HaplotypeScore=145.0517;InbreedingCoeff=0.3361;MQ=54.03;MQ0=12;MQRankSum=-5.248;QD=16.59;ReadPosRankSum=-2.168;VQSLOD=2.4665;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1710	0/0:19,0:19:57.18:0,57,1052	0/0:56,0:25:42.26:0,42,737	0/0:68,0:38:60.17:0,60,1079	0/0:18,0:15:32.63:0,33,527	0/0:20,0:20:57.05:0,57,937	0/1:15,6:17:10.45:259,0,10	1/1:0,21:21:60.11:798,60,0	0/0:38,0:37:99:0,105,2238	0/0:49,0:44:78.50:0,78,1922	0/0:14,0:14:35.97:0,36,578	0/0:34,0:34:99:0,102,2159	0/1:20,4:21:49.03:250,0,49	0/1:17,4:20:44.58:240,0,45	0/0:58,0:56:99:0,153,3163	0/0:52,0:49:99:0,107,2612	0/0:48,0:46:99:0,122,2610	0/0:30,0:30:81.14:0,81,1785	0/0:28,0:24:62.91:0,63,1064	0/0:23,0:21:53.96:0,54,771	0/0:49,0:45:99:0,110,2003	0/1:10,3:13:4.98:243,0,5	0/0:27,0:27:57.10:0,57,877	0/0:52,0:52:99:0,153,3476	0/0:19,0:19:51.05:0,51,831	0/0:37,2:37:71.15:0,71,1769	0/0:27,0:26:68.84:0,69,1501	0/0:15,0:16:9.61:0,10,631
chr10	81686596	.	G	GC	1330.77	PASS	AB=0.770;AC=4;AF=0.071;AN=56;BaseQRankSum=8.540;DP=1097;FS=14.205;HRun=0;HaplotypeScore=141.6161;InbreedingCoeff=-0.0807;MQ=44.18;MQ0=49;MQRankSum=-6.747;QD=7.78;ReadPosRankSum=1.674;VQSLOD=3.1930;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:38:99:0,104,1383	0/0:12,0:12:33.11:0,33,458	0/0:5,0:3:8.94:0,9,81	0/0:10,0:8:18.04:0,18,220	0/0:36,0:29:53.30:0,53,655	0/0:17,0:16:39.13:0,39,530	0/1:33,18:37:99:331,0,369	0/0:27,0:20:60.10:0,60,777	0/0:37,0:36:96.30:0,96,1316	0/0:62,0:49:99:0,127,1677	0/0:24,0:13:14.55:0,15,210	0/0:29,0:28:72.17:0,72,945	0/1:28,13:36:99:499,0,613	0/1:30,9:32:99:244,0,489	0/0:78,0:68:99:0,177,2320	0/0:88,0:83:99:0,200,2675	0/0:61,0:59:99:0,172,2314	0/0:30,0:30:55.47:0,55,910	0/0:31,0:18:51.17:0,51,713	0/0:20,0:14:19.31:0,19,252	0/0:92,0:67:99:0,139,1874	0/1:28,12:32:99:366,0,420	0/0:13,0:9:21.07:0,21,293	0/0:62,0:62:99:0,178,2394	0/0:31,0:28:57.18:0,57,769	0/0:55,0:45:99:0,120,1598	0/0:44,0:40:98.97:0,99,1303	0/0:20,0:16:45.02:0,45,555
chr10	81686657	.	G	GCTA	614.99	PASS	AB=0.909;AC=5;AF=0.089;AN=56;BaseQRankSum=7.355;DP=952;FS=12.496;HRun=0;HaplotypeScore=130.6867;InbreedingCoeff=0.3625;MQ=48.48;MQ0=55;MQRankSum=-6.585;QD=15.37;ReadPosRankSum=-1.906;VQSLOD=2.5795;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:22:60.11:0,60,923	0/0:8,0:7:17.93:0,18,270	0/0:25,0:9:27.09:0,27,479	0/0:29,0:7:20.73:0,21,277	0/0:32,0:27:60.18:0,60,972	0/0:15,0:13:33.11:0,33,578	0/1:12,0:10:39.12:143,0,39	0/0:15,0:5:15.05:0,15,261	0/0:31,0:31:93.31:0,93,1670	0/0:62,0:46:99:0,129,2117	0/0:15,0:12:30.09:0,30,444	0/0:40,0:35:99:0,102,1642	1/1:9,1:9:26.87:300,27,0	0/1:5,3:8:13.29:204,0,13	0/0:89,0:87:99:0,211,3515	0/0:68,0:68:98.35:0,98,2592	0/0:66,0:66:99:0,111,1693	0/0:19,0:19:51.13:0,51,871	0/0:39,0:18:54.05:0,54,861	0/0:30,0:24:57.11:0,57,940	0/0:94,1:77:99:0,161,2736	0/1:10,0:6:13.51:92,0,14	0/0:10,0:10:21.06:0,21,319	0/0:72,0:72:99:0,211,3624	0/0:15,0:13:30.02:0,30,462	0/0:45,0:38:99:0,104,1731	0/0:52,0:47:99:0,117,2024	0/0:12,0:12:26.94:0,27,383
chr10	81686681	.	GTTAT	G	139.37	PASS	AB=1.000;AC=5;AF=0.093;AN=54;BaseQRankSum=3.218;DP=909;FS=11.695;HRun=0;HaplotypeScore=146.6133;InbreedingCoeff=0.6596;MQ=50.88;MQ0=61;MQRankSum=-3.838;QD=3.32;ReadPosRankSum=-3.401;VQSLOD=1.1422;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:17:42.14:0,42,1026	0/0:9,0:8:21.06:0,21,499	0/1:34,0:12:14.98:15,0,586	0/0:29,0:8:18.06:0,18,433	0/0:29,0:18:28.54:0,29,744	0/0:14,0:12:36.12:0,36,916	1/1:2,2:4:8.92:130,9,0	0/0:22,0:18:54.19:0,54,1372	0/0:35,0:35:80.31:0,80,2436	0/0:51,0:38:99:0,110,2750	0/0:9,0:8:21.06:0,21,479	0/0:44,0:39:99:0,111,2773	0/0:4,0:3:3.01:0,3,50	1/1:1,2:3:8.94:109,9,0	0/0:88,0:85:99:0,167,4448	0/0:46,0:44:99:0,120,3026	0/0:73,0:73:99:0,141,3598	0/0:25,0:25:25.10:0,25,1649	0/0:36,0:13:30.06:0,30,788	0/0:35,0:25:57.20:0,57,1519	0/0:88,0:69:99:0,128,3133	./.	0/0:13,0:11:27.09:0,27,644	0/0:73,0:73:99:0,211,5257	0/0:16,0:12:27.09:0,27,656	0/0:38,0:27:72.22:0,72,1711	0/0:51,0:47:99:0,108,2560	0/0:10,0:10:20.10:0,20,490
chr10	81686704	.	TTGC	T	9512.35	PASS	AB=0.814;AC=36;AF=0.643;AN=56;BaseQRankSum=7.403;DP=896;FS=1.166;HRun=0;HaplotypeScore=107.8667;InbreedingCoeff=0.5894;MQ=51.54;MQ0=38;MQRankSum=-0.430;QD=14.30;ReadPosRankSum=1.961;VQSLOD=4.7389;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:29.66:0,30,391	0/0:11,0:10:21.02:0,21,320	0/1:35,0:10:8.80:9,0,57	0/0:27,0:11:22.10:0,22,241	1/1:19,0:15:11.77:86,12,0	0/0:15,0:14:30.02:0,30,418	1/1:15,0:12:10.58:201,11,0	0/1:17,17:31:99:394,0,125	0/0:38,0:38:87.22:0,87,1513	1/1:29,23:40:54.66:504,55,0	1/1:2,5:7:5.93:40,6,0	0/0:40,0:37:87.24:0,87,1534	1/1:9,0:8:0.28:97,0,0	0/1:8,0:7:33.10:63,0,33	1/1:12,74:83:99:1588,108,0	1/1:31,15:42:87.21:1130,87,0	1/1:6,70:75:99:1633,111,0	1/1:16,14:30:63.39:1008,63,0	1/1:17,0:11:15.01:149,15,0	1/1:24,3:23:32.88:354,33,0	1/1:27,64:80:54.52:744,55,0	1/1:5,0:4:9:78,9,0	0/0:12,0:9:2.91:0,3,49	0/0:68,0:68:99:0,159,2815	1/1:13,0:12:6.91:89,7,0	1/1:18,24:36:25.16:461,25,0	1/1:7,33:38:54.18:787,54,0	0/1:4,9:13:23.79:95,0,24
chr10	81686789	.	TTGC	T	4388.68	PASS	AB=0.734;AC=16;AF=0.286;AN=56;BaseQRankSum=4.422;DP=1140;FS=15.760;HRun=0;HaplotypeScore=154.8029;InbreedingCoeff=0.7263;MQ=47.77;MQ0=44;MQRankSum=-3.794;QD=11.80;ReadPosRankSum=0.223;VQSLOD=3.3962;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:20:20.81:0,21,256	0/0:10,0:10:23.07:0,23,362	0/0:35,0:9:13.29:0,13,147	0/0:49,0:13:7.41:0,7,161	0/0:30,0:22:17.49:0,17,321	1/1:9,0:6:5.89:60,6,0	0/1:56,5:55:25.30:596,0,25	0/0:21,0:16:26.34:0,26,184	1/1:8,31:39:30.10:450,30,0	0/0:45,0:38:58.89:0,59,652	0/0:19,0:16:8.51:0,9,112	0/1:8,41:49:37.71:164,0,38	1/1:30,18:40:95.71:1069,96,0	1/1:28,17:41:86.57:973,87,0	0/0:103,0:99:99:0,210,3542	0/0:48,0:45:99:0,111,1703	0/0:65,0:63:99:0,148,2789	0/0:42,0:41:96.12:0,96,1483	0/0:29,0:13:5.82:0,6,233	0/0:22,0:20:30.62:0,31,316	0/0:93,0:86:99:0,157,2159	1/1:30,0:25:26.81:202,27,0	1/1:5,6:10:2.96:19,3,0	1/1:15,65:80:60.14:856,60,0	0/0:11,0:11:14.96:0,15,156	0/0:44,0:36:37.36:0,37,539	0/0:51,0:49:99:0,114,1586	0/0:26,0:26:78.11:0,78,1410
chr10	81686798	.	CTGCTGT	C	1085.60	PASS	AB=0.987;AC=10;AF=0.179;AN=56;BaseQRankSum=2.033;DP=1064;FS=11.935;HRun=0;HaplotypeScore=196.3607;InbreedingCoeff=0.1766;MQ=47.81;MQ0=49;MQRankSum=-6.267;QD=4.19;ReadPosRankSum=-5.666;VQSLOD=-0.3298;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:20:31.19:0,31,621	0/0:9,0:9:23.07:0,23,607	0/0:28,0:9:19.02:0,19,328	0/0:42,0:10:12.25:0,12,358	0/0:27,0:19:34.95:0,35,677	0/0:9,0:5:10.11:0,10,65	0/1:53,0:47:99:404,0,297	0/0:18,0:12:0.77:0,1,208	0/0:34,0:34:29.21:0,29,170	0/0:45,0:38:75.45:0,75,1508	0/0:13,0:10:11.89:0,12,223	0/0:49,0:49:29.35:0,29,303	1/1:45,1:39:26:405,26,0	0/1:42,0:38:32.14:257,0,32	0/0:97,0:92:99:0,197,5358	0/0:46,0:43:79.29:0,79,2244	0/0:70,0:68:99:0,125,4432	0/0:40,0:39:77.20:0,77,1936	0/1:32,0:15:37.79:38,0,428	0/0:20,0:20:36.87:0,37,660	0/0:83,0:75:99:0,126,3491	0/1:21,2:18:63.59:68,0,64	1/1:9,0:8:2.96:19,3,0	0/0:73,1:74:68.14:0,68,454	0/1:13,0:12:6.97:7,0,207	0/1:41,0:30:34.24:34,0,1134	0/0:49,0:46:99:0,117,2638	0/0:26,0:26:78.20:0,78,2211
chr10	81686813	.	TTGTTGC	T	207.71	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=0.885;DP=1058;FS=7.034;HRun=0;HaplotypeScore=204.2108;InbreedingCoeff=0.4528;MQ=48.15;MQ0=45;MQRankSum=-1.920;QD=2.56;ReadPosRankSum=-3.499;VQSLOD=1.2829;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:22:46.31:0,46,1130	0/0:7,0:7:21.02:0,21,507	0/1:20,0:11:12.74:13,0,349	0/0:27,0:11:23.13:0,23,343	0/0:31,0:20:46.19:0,46,931	0/0:16,0:12:16.16:0,16,235	0/0:42,0:37:65.52:0,66,1094	1/1:17,7:15:21.03:292,21,0	0/0:36,0:36:42.01:0,42,613	0/0:67,0:53:99:0,135,2320	0/0:17,0:13:29.63:0,30,478	0/0:55,0:55:59.76:0,60,916	0/1:37,0:36:13.34:13,0,722	0/0:34,0:32:49.56:0,50,906	0/0:94,0:87:99:0,222,5579	0/0:42,0:40:99:0,111,2203	0/0:72,0:70:99:0,201,4772	0/0:33,0:32:81.12:0,81,1855	0/0:49,0:24:59.31:0,59,838	0/0:22,0:20:45.92:0,46,891	0/0:79,0:73:99:0,178,3827	0/0:18,0:14:21.85:0,22,332	0/0:9,0:9:15.05:0,15,353	0/0:66,0:66:83.97:0,84,1304	0/0:10,0:9:11.97:0,12,124	0/0:52,0:41:99:0,117,1984	0/0:46,0:42:99:0,99,2635	0/0:26,0:26:70.81:0,71,2245
chr10	81686931	.	GCTC	G	1600.35	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=8.574;DP=920;FS=1.208;HRun=0;HaplotypeScore=132.2748;InbreedingCoeff=0.8470;MQ=53.31;MQ0=11;MQRankSum=-7.735;QD=16.17;ReadPosRankSum=0.198;VQSLOD=3.1160;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:93.09:0,93,1688	0/0:10,0:10:30.10:0,30,656	0/0:27,0:18:42.77:0,43,864	0/0:36,0:31:68.37:0,68,1579	0/0:20,0:20:54.03:0,54,952	0/0:12,0:12:26.47:0,26,637	1/1:4,18:17:18.06:304,18,0	0/1:23,0:21:26.69:27,0,350	0/0:30,0:30:81.15:0,81,1664	0/0:51,0:45:99:0,126,2527	0/0:7,0:7:21.05:0,21,376	0/0:37,0:37:99:0,102,2152	1/1:4,15:15:27.09:431,27,0	1/1:2,27:28:54.18:878,54,0	0/0:77,0:73:99:0,214,4382	0/0:29,0:28:81.22:0,81,1736	0/0:75,0:70:99:0,171,4107	0/0:28,0:28:48.02:0,48,1738	0/0:30,0:28:77.54:0,78,1416	0/0:27,0:25:60.14:0,60,1048	0/0:100,0:98:99:0,268,5537	1/1:0,6:6:8.99:122,9,0	0/0:11,0:11:30.10:0,30,665	0/0:59,0:59:99:0,145,3192	0/0:17,0:17:48.12:0,48,949	0/0:40,0:40:99:0,114,2106	0/0:48,0:44:99:0,129,2762	0/0:8,0:8:23.98:0,24,411
chr10	81687031	.	CTGT	C	495.88	PASS	AB=0.571;AC=5;AF=0.093;AN=54;BaseQRankSum=7.098;DP=680;FS=10.294;HRun=0;HaplotypeScore=77.7852;InbreedingCoeff=0.5031;MQ=46.40;MQ0=42;MQRankSum=-3.802;QD=10.78;ReadPosRankSum=1.152;VQSLOD=2.3726;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:27:32.19:0,32,579	0/0:5,0:5:12.01:0,12,196	0/0:14,0:1:3.01:0,3,58	0/0:32,0:10:25.58:0,26,253	0/0:18,0:9:6.96:0,7,76	0/0:17,0:16:27.06:0,27,386	0/1:5,15:18:26.78:27,0,31	0/0:11,0:10:15.17:0,15,93	0/0:32,0:32:86.60:0,87,1544	0/0:29,0:23:39.58:0,40,581	./.	0/0:42,0:41:99:0,117,2291	1/1:9,4:12:27.09:403,27,0	1/1:1,12:12:12.04:188,12,0	0/0:55,0:43:99:0,114,1982	0/0:24,0:24:57.27:0,57,1167	0/0:43,0:38:87.26:0,87,1811	0/0:28,0:27:81.06:0,81,1376	0/0:27,0:17:44.98:0,45,485	0/0:9,0:7:0.97:0,1,24	0/0:82,0:68:99:0,127,2540	0/0:4,0:2:1.25:0,1,3	0/0:11,0:8:1.09:0,1,18	0/0:53,0:53:99:0,123,2472	0/0:9,0:7:3:0,3,26	0/0:15,0:12:32.86:0,33,411	0/0:26,0:22:37.36:0,37,922	0/0:6,0:5:15.02:0,15,260
chr10	81687034	.	TTGCTGC	T	62.88	PASS	AB=0.970;AC=5;AF=0.093;AN=54;BaseQRankSum=6.415;DP=690;FS=3.721;HRun=0;HaplotypeScore=108.2117;InbreedingCoeff=0.1985;MQ=46.52;MQ0=41;MQRankSum=-5.371;QD=1.05;ReadPosRankSum=-2.891;VQSLOD=1.3539;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:27:32.44:0,32,926	0/0:6,0:6:15.03:0,15,319	0/0:13,0:1:3.01:0,3,96	0/0:33,0:10:26.67:0,27,558	0/0:18,0:10:4.28:0,4,108	0/0:18,0:17:27.09:0,27,772	0/0:21,0:20:8.41:0,8,82	1/1:8,0:7:14.87:105,15,0	0/0:33,0:33:69.10:0,69,2421	0/0:26,0:20:34.85:0,35,899	./.	0/0:44,0:43:99:0,117,3654	0/0:14,0:13:1.82:0,2,36	0/1:14,0:13:13.39:13,0,17	0/0:55,3:46:84.15:0,84,3163	0/0:25,0:25:75.07:0,75,1977	0/0:34,8:37:87.27:0,87,2845	0/0:28,0:27:75.26:0,75,2171	0/0:27,1:19:41.99:0,42,835	0/1:8,0:5:0.40:0,0,47	0/0:70,11:67:81.91:0,82,4082	0/0:5,0:3:2.80:0,3,13	0/0:13,0:10:1.50:0,2,67	0/0:50,0:50:99:0,138,3942	0/0:8,0:7:3.01:0,3,51	0/0:19,0:15:41.97:0,42,832	0/1:27,3:23:52.30:52,0,1205	0/0:6,0:5:15.05:0,15,429
chr10	81687263	.	A	AT	1992.28	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-6.960;DP=591;FS=2.897;HRun=9;HaplotypeScore=57.8255;InbreedingCoeff=0.9809;MQ=81.97;MQ0=0;MQRankSum=-0.674;QD=25.22;ReadPosRankSum=-0.416;VQSLOD=4.2709;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:83.95:0,84,729	0/0:15,0:15:8.96:0,9,302	0/0:22,0:22:28.12:0,28,325	0/0:19,0:20:38.75:0,39,305	0/0:21,0:21:47.98:0,48,417	0/0:17,0:17:44.99:0,45,391	1/1:2,22:24:57.15:631,57,0	0/0:28,0:28:65.93:0,66,561	0/0:9,0:9:17.99:0,18,156	0/0:22,0:22:53.97:0,54,469	0/0:17,0:17:38.98:0,39,338	0/0:21,0:22:50.01:0,50,423	1/1:3,18:21:48.13:531,48,0	1/1:2,20:22:60.16:659,60,0	0/0:25,0:25:68.94:0,69,591	0/0:19,0:19:44.98:0,45,391	0/0:23,0:23:62.98:0,63,547	0/0:21,0:21:50.95:0,51,436	0/0:22,0:23:59.01:0,59,497	0/0:23,0:24:65.01:0,65,553	0/0:16,0:16:44.98:0,45,391	1/1:2,10:12:30.08:332,30,0	0/0:30,0:30:57.20:0,57,623	0/0:18,0:18:50.99:0,51,443	0/0:18,0:18:41.97:0,42,365	0/0:29,0:30:83.01:0,83,709	0/0:28,0:28:80.97:0,81,703	0/0:10,0:10:29.99:0,30,260
chr10	81688821	.	T	TCC	10698.72	PASS	AB=0.993;AC=43;AF=0.768;AN=56;BaseQRankSum=-8.549;DP=649;FS=5.413;HRun=7;HaplotypeScore=100.3558;InbreedingCoeff=0.4889;MQ=74.76;MQ0=3;MQRankSum=-1.125;QD=19.92;ReadPosRankSum=0.041;VQSLOD=3.0536;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.16:0,72,805	0/0:15,0:15:38.96:0,39,411	0/0:28,0:22:57.11:0,57,599	0/0:41,0:36:71.15:0,71,737	1/1:3,19:24:55.26:888,55,0	0/1:29,0:29:92.35:92,0,126	1/1:18,0:18:17.98:151,18,0	1/1:11,0:11:12.44:109,12,0	0/1:32,0:32:38.37:38,0,158	1/1:4,25:30:74.97:1020,75,0	1/1:2,18:20:29.18:540,29,0	0/1:22,0:22:56.40:56,0,108	1/1:21,0:21:47.94:397,48,0	1/1:30,0:30:59.93:500,60,0	1/1:2,28:30:48.50:789,49,0	1/1:4,15:19:20:433,20,0	1/1:3,19:23:35.24:680,35,0	1/1:1,11:12:24.08:394,24,0	1/1:5,8:14:9.42:295,9,0	1/1:4,23:29:71.56:1010,72,0	1/1:4,20:26:39.13:638,39,0	1/1:19,0:19:32.85:269,33,0	0/1:25,0:25:56.88:57,0,94	0/1:20,0:20:15.29:15,0,85	1/1:0,18:18:30.10:492,30,0	1/1:5,21:26:63.05:813,63,0	1/1:4,17:21:36.12:569,36,0	1/1:3,10:13:29.69:452,30,0
chr10	81688827	.	C	CCCA	4626.77	PASS	AB=0.996;AC=27;AF=0.482;AN=56;BaseQRankSum=7.017;DP=668;FS=6.759;HRun=0;HaplotypeScore=145.9931;InbreedingCoeff=0.2167;MQ=71.75;MQ0=3;MQRankSum=-3.064;QD=10.96;ReadPosRankSum=7.895;VQSLOD=3.4571;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.03:0,90,1243	0/0:14,0:14:42.12:0,42,607	0/0:29,0:23:63.13:0,63,734	0/0:40,0:34:89.46:0,89,1047	0/1:24,0:24:31.07:106,0,31	0/0:30,0:30:15.28:0,15,557	1/1:5,14:20:20.84:423,21,0	0/1:10,0:10:12.74:30,0,13	0/0:31,0:31:84.17:0,84,743	0/1:33,0:33:89.38:115,0,89	0/1:23,0:23:48.13:58,0,48	0/0:25,0:25:71.98:0,72,609	1/1:2,22:24:48.16:1083,48,0	1/1:0,28:29:60.68:1355,61,0	1/1:29,0:29:38.08:126,38,0	0/1:22,0:22:28.60:29,0,120	0/1:21,0:21:16.95:67,0,17	0/1:18,0:18:9.63:67,0,10	0/1:17,0:16:1.37:1,0,165	1/1:30,0:30:4.01:140,4,0	1/1:24,0:24:6.24:70,6,0	1/1:3,16:19:33.11:711,33,0	0/0:27,0:26:67.23:0,67,562	0/0:16,0:16:46.46:0,46,410	0/1:21,0:20:24.31:46,0,24	0/1:22,0:23:35.59:87,0,36	0/1:23,0:22:38.42:38,0,63	1/1:10,0:10:20.79:75,21,0
chr10	81689594	.	T	TAA	1121.67	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-1.503;DP=532;FS=0.000;HRun=10;HaplotypeScore=81.9429;InbreedingCoeff=0.9406;MQ=75.30;MQ0=0;MQRankSum=-0.949;QD=21.57;ReadPosRankSum=0.837;VQSLOD=2.9424;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:57.08:0,57,573	0/0:6,0:6:18.04:0,18,183	0/0:21,0:19:28.60:0,29,256	0/0:19,0:17:20.47:0,20,199	0/0:33,0:33:75.10:0,75,762	0/0:20,0:21:44.74:0,45,438	1/1:4,4:8:12.04:179,12,0	0/0:30,0:30:66.10:0,66,671	0/0:16,0:16:45.09:0,45,457	0/0:22,0:22:60.12:0,60,606	0/0:16,0:16:33.01:0,33,335	0/0:29,0:29:47.89:0,48,677	1/1:6,14:20:36.12:537,36,0	1/1:7,7:15:18.06:264,18,0	0/0:18,0:18:42.05:0,42,427	0/0:12,0:12:24.03:0,24,244	0/0:19,0:19:51.11:0,51,518	0/0:12,0:12:30.04:0,30,305	0/0:24,0:24:29.94:0,30,522	0/0:24,0:24:62.88:0,63,625	0/0:10,0:10:3.67:0,4,221	1/1:1,7:9:21.06:298,21,0	0/0:23,0:23:51.02:0,51,510	0/0:11,0:11:27.05:0,27,273	0/0:20,0:20:39.01:0,39,397	0/0:17,0:17:36.02:0,36,366	0/0:40,0:41:99:0,105,1035	0/0:13,0:13:36.06:0,36,365
chr10	81691599	.	AT	A	2099.28	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.874;DP=567;FS=0.442;HRun=8;HaplotypeScore=56.9163;InbreedingCoeff=0.9653;MQ=60.00;MQ0=0;MQRankSum=0.792;QD=23.33;ReadPosRankSum=0.800;VQSLOD=4.1200;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.22:0,81,953	0/0:14,1:15:10.22:0,10,406	0/0:17,0:11:25.62:0,26,284	0/0:9,0:7:8.23:0,8,133	0/0:25,0:25:54.15:0,54,641	0/0:21,0:21:57.17:0,57,687	1/1:2,20:22:57.09:550,57,0	0/0:28,0:28:66.20:0,66,797	0/0:22,0:22:57.16:0,57,677	0/0:24,0:24:66.19:0,66,785	0/0:15,0:15:42.13:0,42,507	0/0:17,1:18:22.18:0,22,551	1/1:2,18:20:51.08:493,51,0	1/1:1,24:25:66.11:637,66,0	0/0:22,0:22:60.17:0,60,712	0/0:17,0:17:51.13:0,51,595	0/0:17,0:18:45.10:0,45,527	0/0:16,1:17:22.18:0,22,546	0/0:18,0:18:42.10:0,42,491	0/0:22,0:22:60.18:0,60,724	0/0:20,0:21:57.16:0,57,671	1/1:1,22:23:60.10:579,60,0	0/0:23,0:24:60.17:0,60,715	0/0:10,0:10:24.07:0,24,290	0/0:17,0:17:48.15:0,48,580	0/0:27,0:27:72.22:0,72,870	0/0:32,0:32:93.27:0,93,1106	0/0:8,0:7:21.06:0,21,254
chr10	81693066	.	T	TCA	2437.80	PASS	AB=0.894;AC=40;AF=0.769;AN=52;BaseQRankSum=-3.239;DP=541;FS=0.000;HRun=0;HaplotypeScore=99.5466;InbreedingCoeff=0.0600;MQ=67.94;MQ0=11;MQRankSum=0.093;QD=5.39;ReadPosRankSum=-1.582;VQSLOD=2.6536;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:28:19.72:0,20,95	0/0:8,0:9:8.70:0,9,51	./.	./.	1/1:19,0:21:6:53,6,0	1/1:12,2:19:6.01:70,6,0	1/1:17,2:19:5.22:84,5,0	1/1:31,0:30:0.47:1,0,0	1/1:12,2:21:21.02:220,21,0	0/1:22,0:22:4.66:47,0,5	1/1:19,4:23:14.64:185,15,0	1/1:9,0:18:9:78,9,0	1/1:12,0:15:14.96:129,15,0	1/1:12,0:13:6:52,6,0	0/1:13,4:17:40.56:236,0,41	0/1:12,2:14:20.30:103,0,20	0/1:8,2:11:2.12:96,0,2	0/1:14,2:15:11.32:215,0,11	0/1:17,0:16:19.92:20,0,26	1/1:13,4:17:12.04:176,12,0	1/1:24,3:25:11.94:128,12,0	1/1:15,0:15:3:27,3,0	1/1:17,1:20:2.99:26,3,0	1/1:18,2:31:21.02:223,21,0	1/1:11,1:12:6.02:88,6,0	0/1:23,1:25:3.87:79,0,4	0/1:13,4:17:14.29:182,0,14	1/1:4,1:5:5.98:64,6,0
chr10	81693113	.	G	GTT	4903.49	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=5.688;DP=585;FS=4.328;HRun=7;HaplotypeScore=117.7810;InbreedingCoeff=0.9968;MQ=59.69;MQ0=15;MQRankSum=-4.807;QD=12.41;ReadPosRankSum=-0.283;VQSLOD=1.5635;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:58.20:0,58,679	0/0:10,0:10:20.81:0,21,224	0/0:18,0:12:36.09:0,36,408	0/0:25,0:10:23.22:0,23,236	1/1:6,0:26:47.71:192,48,0	0/0:18,0:18:27.64:0,28,320	1/1:7,0:20:45.76:398,46,0	1/1:4,36:38:99:1531,99,0	0/0:23,0:21:41.27:0,41,472	1/1:4,0:27:59.86:212,60,0	1/1:3,0:20:31.36:129,31,0	0/0:20,0:18:36.07:0,36,405	1/1:3,0:17:40.85:387,41,0	1/1:5,0:18:44.70:390,45,0	1/1:3,0:19:38.14:142,38,0	1/1:4,0:17:32.91:126,33,0	1/1:2,0:16:28.37:117,28,0	1/1:6,0:20:41.37:160,41,0	1/1:7,0:20:32.25:114,32,0	1/1:5,0:18:33.03:124,33,0	1/1:5,0:14:22.93:91,23,0	1/1:2,0:8:20.91:170,21,0	0/0:21,0:21:40.57:0,41,476	0/0:24,0:24:48.09:0,48,550	1/1:1,0:14:24.95:88,25,0	1/1:5,0:27:52.40:185,52,0	1/1:5,0:32:70.36:260,70,0	1/1:2,0:13:24.95:89,25,0
chr10	81693562	.	C	CTTT	1421.64	PASS	AB=0.556;AC=34;AF=0.607;AN=56;BaseQRankSum=12.258;DP=581;FS=1.982;HRun=9;HaplotypeScore=112.2806;InbreedingCoeff=0.8389;MQ=66.41;MQ0=1;MQRankSum=-0.545;QD=3.85;ReadPosRankSum=1.559;VQSLOD=-0.7533;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:87.21:0,87,1068	0/0:8,0:8:21.06:0,21,265	0/0:24,0:23:24.16:0,24,504	0/0:13,0:11:15.30:0,15,237	1/1:3,0:27:28.97:63,29,0	0/0:30,0:30:90.27:0,90,1117	1/1:2,1:7:5.99:65,6,0	0/0:7,0:28:51.59:0,52,322	0/0:23,0:23:63.18:0,63,783	1/1:3,0:21:24.25:60,24,0	1/1:5,0:26:27.11:72,27,0	0/0:17,0:17:45.11:0,45,552	1/1:3,0:19:9.03:129,9,0	1/1:0,0:15:24.08:343,24,0	1/1:0,0:17:16.20:35,16,0	1/1:2,0:24:24.92:54,25,0	1/1:3,0:24:25.42:71,25,0	1/1:2,0:16:9.06:25,9,0	0/1:7,0:25:4.71:71,0,5	1/1:1,0:19:25.89:84,26,0	1/1:1,0:16:18.69:40,19,0	1/1:2,1:18:32.27:319,32,0	0/0:14,0:14:42.07:0,42,510	0/0:18,0:18:51.09:0,51,611	1/1:1,0:23:24.92:54,25,0	0/1:3,0:26:4.49:51,0,4	1/1:4,0:37:37.56:86,38,0	1/1:1,0:9:7.48:16,7,0
chr10	81693913	.	TGG	T	1136.60	PASS	AB=0.637;AC=4;AF=0.071;AN=56;BaseQRankSum=9.267;DP=353;FS=8.895;HRun=2;HaplotypeScore=59.2791;InbreedingCoeff=-0.0470;MQ=57.66;MQ0=10;MQRankSum=1.236;QD=12.77;ReadPosRankSum=8.337;VQSLOD=-0.1496;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:86.52:0,87,1395	0/0:6,0:6:13.98:0,14,258	0/0:39,0:22:63.10:0,63,799	0/0:40,0:20:34.77:0,35,649	0/0:4,0:4:12.04:0,12,177	0/0:10,0:10:27.01:0,27,350	0/1:6,14:20:9.13:337,0,9	0/0:5,0:5:15.05:0,15,194	0/0:9,0:8:24.08:0,24,345	0/0:10,0:9:27.07:0,27,348	0/0:7,0:7:12.04:0,12,158	0/0:7,0:7:21.07:0,21,351	0/1:8,15:23:20.50:322,0,20	0/1:13,16:29:31.45:429,0,31	0/0:13,0:13:39.12:0,39,619	0/0:5,0:5:15.03:0,15,203	0/0:9,0:7:18:0,18,234	0/0:2,0:2:6:0,6,62	0/0:8,0:8:21.06:0,21,292	0/0:7,0:7:18.06:0,18,274	0/0:18,0:15:26.62:0,27,378	0/1:10,7:17:38.59:157,0,39	0/0:3,0:3:9.03:0,9,118	0/0:11,0:11:26.96:0,27,336	0/0:5,0:5:12.03:0,12,184	0/0:8,0:7:21.07:0,21,334	0/0:4,0:4:12.04:0,12,199	0/0:3,0:3:6.02:0,6,81
chr10	81693916	.	TG	T	577.18	PASS	AB=0.637;AC=4;AF=0.071;AN=56;BaseQRankSum=9.374;DP=349;FS=6.696;HRun=2;HaplotypeScore=55.7939;InbreedingCoeff=-0.0986;MQ=58.78;MQ0=10;MQRankSum=2.276;QD=6.49;ReadPosRankSum=8.327;VQSLOD=0.2958;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:83.63:0,84,1183	0/0:6,0:6:15.94:0,16,219	0/0:38,1:22:57.14:0,57,688	0/0:39,0:19:47.72:0,48,573	0/0:4,0:4:12.04:0,12,161	0/0:11,0:11:30.09:0,30,394	0/1:7,14:21:47.88:199,0,48	0/0:5,0:5:15.04:0,15,189	0/0:9,0:8:24.08:0,24,334	0/0:8,0:7:21.05:0,21,268	0/0:6,0:6:9.02:0,9,108	0/0:7,0:7:21.07:0,21,302	0/1:9,15:24:42.26:195,0,42	0/1:12,16:28:94.85:215,0,95	0/0:12,0:12:36.12:0,36,507	0/0:5,0:5:15.05:0,15,205	0/0:8,0:6:12.04:0,12,165	0/0:1,0:1:2.99:0,3,24	0/0:9,0:9:24.05:0,24,315	0/0:7,0:7:18.06:0,18,250	0/0:17,0:14:26.62:0,27,374	0/1:9,7:16:77.45:77,0,105	0/0:4,0:4:12.04:0,12,163	0/0:10,0:10:21.07:0,21,294	0/0:6,0:6:12.02:0,12,154	0/0:10,0:9:24.08:0,24,331	0/0:4,0:4:12.04:0,12,171	0/0:3,0:3:6.02:0,6,83
chr10	81696096	.	GGT	G	6375.54	PASS	AB=0.928;AC=45;AF=0.804;AN=56;BaseQRankSum=9.762;DP=875;FS=26.122;HRun=0;HaplotypeScore=145.0068;InbreedingCoeff=0.0072;MQ=60.62;MQ0=28;MQRankSum=1.248;QD=7.66;ReadPosRankSum=-1.338;VQSLOD=2.6786;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:53,2:54:5.25:5,0,906	0/1:9,3:12:49.28:104,0,49	0/0:43,0:21:8.99:0,9,92	0/1:59,0:23:12.71:13,0,42	1/1:10,22:31:23.62:248,24,0	0/1:32,0:32:94.44:94,0,137	1/1:17,4:21:32.27:288,32,0	1/1:35,0:42:45.99:305,46,0	0/1:27,0:27:40.30:40,0,130	1/1:13,16:30:50.42:443,50,0	1/1:9,13:22:17.77:208,18,0	0/1:30,0:30:57.85:58,0,147	1/1:14,16:31:23.28:237,23,0	1/1:21,13:36:71.56:675,72,0	1/1:6,30:37:38.84:415,39,0	1/1:17,22:39:18.55:344,19,0	0/1:9,22:30:1.95:427,0,2	1/1:10,16:26:27.63:415,28,0	1/1:20,2:15:26.81:244,27,0	1/1:8,14:22:23.68:228,24,0	1/1:19,29:49:4.93:256,5,0	1/1:9,19:29:18.83:210,19,0	0/1:12,0:12:14.37:14,0,71	0/1:37,0:36:79.82:80,0,169	1/1:3,16:19:12.04:139,12,0	1/1:16,26:43:79.99:702,80,0	1/1:8,12:20:10.91:114,11,0	1/1:5,9:14:6.02:69,6,0
chr10	81696120	.	TGTGA	T	1089.68	PASS	AB=0.961;AC=16;AF=0.286;AN=56;BaseQRankSum=0.593;DP=888;FS=11.773;HRun=0;HaplotypeScore=192.0094;InbreedingCoeff=-0.3701;MQ=59.82;MQ0=30;MQRankSum=-2.742;QD=2.13;ReadPosRankSum=-2.481;VQSLOD=1.1176;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,125,1993	0/1:11,0:11:17.33:17,0,257	0/0:47,0:14:28.48:0,28,310	0/1:56,0:22:1.39:1,0,294	0/0:30,0:29:37.61:0,38,239	0/1:15,13:28:99:187,0,219	0/1:22,0:22:95.31:95,0,185	0/1:42,0:40:82.85:83,0,582	0/0:30,0:30:41.93:0,42,243	0/1:26,1:27:99:155,0,183	0/0:16,0:16:16.52:0,17,80	0/0:27,0:27:5.25:0,5,235	0/1:27,0:27:27.35:27,0,210	0/1:36,0:36:91.92:92,0,284	0/1:44,1:45:75.64:76,0,363	0/1:44,1:44:0.23:0,0,462	0/0:32,0:31:34.32:0,34,330	0/1:22,2:24:69.57:70,0,169	0/1:21,2:17:99:168,0,137	0/1:20,1:21:24.54:25,0,189	0/1:48,1:49:83.54:84,0,370	0/0:30,0:30:20.70:0,21,251	0/0:20,0:20:19.28:0,19,122	0/0:44,0:43:11.22:0,11,278	0/0:24,0:24:15.29:0,15,211	0/1:39,0:38:99:156,0,281	0/0:22,0:21:30.66:0,31,261	0/1:15,0:15:3.36:3,0,101
chr10	81698266	.	AAC	A	1259.09	PASS	AB=0.916;AC=20;AF=0.357;AN=56;BaseQRankSum=0.256;DP=619;FS=4.855;HRun=0;HaplotypeScore=102.7800;InbreedingCoeff=0.0967;MQ=61.88;MQ0=17;MQRankSum=0.360;QD=3.60;ReadPosRankSum=-0.368;VQSLOD=1.8698;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:24:12:0,12,105	0/0:5,1:5:12.04:0,12,179	0/0:23,0:11:3.01:0,3,43	0/0:25,0:11:0:0,0,0	0/1:18,4:22:33.96:34,0,267	0/1:22,5:27:61.45:61,0,309	1/1:14,8:23:17.88:182,18,0	0/1:25,0:30:5.34:53,0,5	0/0:24,0:25:30.74:0,31,494	0/1:27,1:28:20.83:21,0,366	0/0:21,2:23:17.59:0,18,497	0/1:15,2:17:33.79:34,0,278	1/1:6,16:24:53.54:544,54,0	1/1:3,5:9:14.87:148,15,0	0/1:28,2:29:6.94:7,0,536	0/0:24,1:25:5.49:0,5,351	0/0:32,1:32:14.54:0,15,473	0/1:12,2:14:51.57:52,0,144	0/1:24,1:25:18.48:18,0,115	0/0:24,1:25:17.52:0,18,482	0/1:29,0:28:7.43:7,0,339	1/1:10,13:25:23.90:249,24,0	0/0:22,0:22:30.86:0,31,333	0/1:15,1:16:15.46:15,0,164	0/0:22,0:21:42.12:0,42,487	0/0:15,0:14:24.07:0,24,267	0/1:17,1:18:1.46:1,0,262	0/1:11,1:12:3.48:3,0,272
chr10	81698778	.	T	TA	984.52	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.127;DP=596;FS=6.828;HRun=1;HaplotypeScore=57.1890;InbreedingCoeff=0.9981;MQ=93.72;MQ0=0;MQRankSum=-3.070;QD=37.87;ReadPosRankSum=-3.674;VQSLOD=2.3193;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1464	0/0:11,0:11:27.09:0,27,351	0/0:26,0:26:67.32:0,67,814	0/0:30,0:29:65.63:0,66,965	0/0:42,0:41:99:0,126,1630	0/0:22,0:22:66.21:0,66,856	0/0:21,0:21:63.17:0,63,787	1/1:1,25:26:72.24:1079,72,0	0/0:21,0:21:63.20:0,63,818	0/0:25,0:25:63.20:0,63,818	0/0:23,0:23:66.21:0,66,856	0/0:16,0:16:45.15:0,45,584	0/0:11,0:11:30.10:0,30,390	0/0:14,0:14:42.14:0,42,545	0/0:30,0:30:90.27:0,90,1140	0/0:14,0:14:39.13:0,39,506	0/0:16,0:16:48.14:0,48,608	0/0:12,0:12:36.12:0,36,467	0/0:14,0:14:38.31:0,38,455	0/0:25,0:25:75.24:0,75,973	0/0:22,0:22:63.17:0,63,787	0/0:17,0:17:48.16:0,48,623	0/0:20,0:20:60.17:0,60,751	0/0:15,0:15:45.13:0,45,568	0/0:20,0:20:60.17:0,60,763	0/0:22,0:22:63.20:0,63,818	0/0:27,0:26:78.24:0,78,997	0/0:15,0:15:42.14:0,42,545
chr10	81698988	.	C	CT	1133.75	PASS	AB=0.676;AC=7;AF=0.125;AN=56;BaseQRankSum=-6.796;DP=568;FS=0.000;HRun=12;HaplotypeScore=72.3305;InbreedingCoeff=0.3736;MQ=75.89;MQ0=1;MQRankSum=1.001;QD=10.50;ReadPosRankSum=0.246;VQSLOD=3.0106;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:30:68.50:0,69,464	0/0:9,0:10:25.87:0,26,181	0/0:35,0:26:5.19:0,5,118	0/1:22,0:15:3.14:3,0,39	0/0:33,1:36:18.58:0,19,417	0/1:8,11:21:26.83:229,0,27	0/0:3,0:9:12.21:0,12,35	0/0:23,1:25:30.18:0,30,309	1/1:6,17:23:22.91:387,23,0	0/0:22,0:24:64.64:0,65,465	0/0:19,0:20:37.74:0,38,268	0/1:2,6:9:1.20:125,0,1	0/0:3,0:14:18.32:0,18,53	0/0:2,0:15:24.44:0,24,71	0/0:28,0:31:60.66:0,61,422	0/0:19,3:22:18.51:0,19,299	0/0:16,1:19:19.62:0,20,287	0/0:10,0:11:31.87:0,32,225	0/0:22,0:25:53.80:0,54,368	0/0:24,1:27:37.57:0,38,420	0/0:2,0:2:2.98:0,3,22	0/0:1,0:15:24.42:0,24,71	0/1:6,10:17:2.34:265,0,2	0/1:5,10:15:7.72:256,0,8	0/0:24,3:26:24.50:0,24,343	0/0:26,3:32:17.50:0,18,367	0/0:22,0:23:55.68:0,56,396	0/0:8,0:8:22.92:0,23,159
chr10	81699920	.	A	AT	480.33	PASS	AB=0.677;AC=14;AF=0.250;AN=56;BaseQRankSum=0.158;DP=241;FS=8.781;HRun=0;HaplotypeScore=54.1182;InbreedingCoeff=0.4395;MQ=54.33;MQ0=10;MQRankSum=-0.628;QD=9.80;ReadPosRankSum=0.794;VQSLOD=2.9130;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:63.10:0,63,831	0/0:5,0:4:12.04:0,12,167	0/0:7,0:5:11.69:0,12,98	0/0:3,0:1:2.22:0,2,7	0/0:10,0:9:22.42:0,22,177	0/1:4,7:10:7.05:151,0,7	1/1:1,6:6:17.75:114,18,0	0/0:18,0:17:5.15:0,5,141	1/1:0,2:2:5.94:44,6,0	0/0:11,0:11:29.54:0,30,244	0/0:11,0:10:22.38:0,22,142	0/1:3,2:5:10.87:34,0,11	1/1:1,6:8:5.91:131,6,0	0/1:4,4:8:38.07:70,0,38	0/0:7,0:7:14.89:0,15,113	0/0:7,0:7:17.87:0,18,135	0/0:14,0:11:32.77:0,33,244	0/0:6,0:5:8.72:0,9,57	0/0:11,0:8:23.57:0,24,198	0/0:10,0:10:29.84:0,30,245	0/0:2,0:2:2.99:0,3,23	1/1:0,2:2:5.87:41,6,0	0/1:3,2:4:23.55:32,0,24	1/1:0,1:1:3:25,3,0	0/0:6,0:4:5.98:0,6,47	0/0:14,0:14:37.76:0,38,273	0/0:14,0:13:26.87:0,27,205	0/0:11,0:11:26.88:0,27,206
chr10	81699921	.	A	AAAAT	9363.92	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-5.041;DP=259;FS=28.879;HRun=0;HaplotypeScore=39.6070;InbreedingCoeff=0.7371;MQ=57.42;MQ0=10;MQRankSum=0.945;QD=47.29;ReadPosRankSum=1.723;VQSLOD=2.7414;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:51.12:0,51,786	0/0:6,0:5:12.04:0,12,197	0/0:8,0:6:11.82:0,12,107	0/0:3,0:1:2.68:0,3,11	1/1:3,7:9:21.07:440,21,0	1/1:3,0:9:24.08:528,24,0	1/1:1,0:6:18.06:424,18,0	0/0:19,0:18:6.36:0,6,160	1/1:1,0:3:6.02:141,6,0	1/1:0,11:11:30.07:651,30,0	1/1:1,8:13:32.86:561,33,0	1/1:3,0:5:12:188,12,0	1/1:1,0:8:18.06:419,18,0	1/1:4,0:8:21.05:378,21,0	1/1:0,7:7:15.05:363,15,0	1/1:1,6:7:15.05:363,15,0	1/1:3,11:13:33.11:799,33,0	1/1:4,2:5:8.96:163,9,0	1/1:4,7:11:30.07:555,30,0	1/1:1,9:12:29.96:618,30,0	1/1:0,2:2:3.01:73,3,0	1/1:0,0:2:6.02:139,6,0	1/1:3,0:4:8.95:157,9,0	1/1:0,0:1:3.01:70,3,0	1/1:2,5:7:6.02:145,6,0	1/1:1,14:15:38.96:896,39,0	1/1:2,11:14:27:638,27,0	1/1:0,11:11:27.09:654,27,0
chr10	81704038	.	A	AT	784.34	PASS	AB=1.000;AC=21;AF=0.808;AN=26;BaseQRankSum=-2.357;DP=101;FS=19.638;HRun=1;HaplotypeScore=14.5364;InbreedingCoeff=0.1584;MQ=58.61;MQ0=48;MQRankSum=-2.706;QD=13.76;ReadPosRankSum=0.786;VQSLOD=0.6596;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,1:1:3.01:45,3,0	./.	0/1:7,0:4:26.32:26,0,33	0/0:5,0:2:3.01:0,3,37	1/1:3,2:2:6.02:90,6,0	./.	./.	./.	./.	1/1:3,3:1:3.01:45,3,0	1/1:1,2:2:5.98:65,6,0	./.	1/1:2,1:1:3.01:45,3,0	1/1:1,1:1:3.01:42,3,0	./.	./.	./.	./.	0/0:7,0:1:2.22:0,2,7	./.	./.	1/1:1,2:1:3.01:45,3,0	1/1:2,3:1:3.01:39,3,0	./.	./.	./.	1/1:3,7:7:18.06:264,18,0	1/1:4,4:5:12.04:173,12,0
chr10	81708985	.	TAATAAAAAAAAAAAAAAA	T	62.50	PASS	AC=2;AF=0.20;AN=10;BaseQRankSum=1.434;DP=53;FS=10.055;HRun=0;HaplotypeScore=55.6177;MQ=73.95;MQ0=29;MQRankSum=-0.053;QD=12.50;ReadPosRankSum=-1.009;VQSLOD=0.1457;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:7:21.04:0,21,1514	0/0:4,0:4:12.03:0,12,430	0/0:6,0:2:6.02:0,6,103	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/0:5,0:1:3.01:0,3,222	./.	./.	./.	./.	./.	./.	./.	1/1:1,4:4:11.88:137,12,0	./.	./.
chr10	81709230	.	GT	G	651.94	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.576;DP=590;FS=2.565;HRun=8;HaplotypeScore=60.7157;InbreedingCoeff=0.9617;MQ=71.15;MQ0=0;MQRankSum=1.785;QD=21.03;ReadPosRankSum=-4.475;VQSLOD=2.0701;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.20:0,69,818	0/0:6,0:7:14.88:0,15,144	0/0:19,0:19:23.26:0,23,453	0/0:11,0:10:21.03:0,21,230	0/0:44,0:45:99:0,129,1524	0/0:30,0:30:81.22:0,81,963	0/0:14,0:14:39.12:0,39,471	1/1:5,26:31:78.11:747,78,0	0/0:14,0:14:36.11:0,36,435	0/0:31,0:31:84.24:0,84,1000	0/0:24,0:24:69.21:0,69,827	0/0:15,0:15:42.13:0,42,507	0/0:18,0:18:54.16:0,54,642	0/0:27,0:27:78.24:0,78,942	0/0:21,0:21:51.15:0,51,607	0/0:13,0:13:36.09:0,36,412	0/0:18,0:18:48.14:0,48,569	0/0:11,0:11:33.10:0,33,398	0/0:24,0:24:66.20:0,66,788	0/0:24,0:24:66.20:0,66,797	0/0:10,0:10:30.09:0,30,362	0/0:32,0:32:84.26:0,84,1014	0/0:22,0:22:63.16:0,63,745	0/0:18,0:18:54.17:0,54,652	0/0:23,0:23:60.14:0,60,697	0/0:20,0:20:51.16:0,51,616	0/0:37,0:37:99:0,102,1229	0/0:5,0:5:15.05:0,15,181
chr10	81710290	.	AT	A	4499.65	PASS	AB=0.972;AC=42;AF=0.750;AN=56;BaseQRankSum=2.960;DP=358;FS=19.621;HRun=10;HaplotypeScore=47.9058;InbreedingCoeff=0.6600;MQ=82.43;MQ0=9;MQRankSum=-0.041;QD=14.52;ReadPosRankSum=2.464;VQSLOD=3.2675;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:69.15:0,69,749	0/0:5,0:5:11.06:0,11,105	0/1:28,0:15:7.61:8,0,71	0/1:32,1:20:4.70:5,0,87	1/1:3,16:19:5.83:279,6,0	1/1:1,11:12:26.99:234,27,0	0/0:5,0:5:12.03:0,12,133	1/1:8,18:26:47.97:416,48,0	1/1:1,7:8:21:182,21,0	1/1:2,19:21:53.98:469,54,0	1/1:5,12:17:26.96:234,27,0	1/1:4,2:5:6:52,6,0	0/0:4,0:4:12.03:0,12,133	0/0:4,0:4:12.03:0,12,133	1/1:0,1:1:3:26,3,0	1/1:1,4:5:6:52,6,0	1/1:3,13:16:35.99:313,36,0	1/1:5,16:20:44.91:382,45,0	1/1:1,9:10:26.99:234,27,0	1/1:3,10:13:29.98:260,30,0	1/1:1,2:3:3.47:26,3,0	0/0:3,0:3:6.02:0,6,66	1/1:1,1:1:3:26,3,0	1/1:1,4:4:6:52,6,0	1/1:0,16:16:35.99:313,36,0	1/1:1,12:13:35.99:312,36,0	1/1:3,12:15:29.99:260,30,0	1/1:2,17:19:41.99:365,42,0
chr10	81711726	.	ACC	A	1891.79	PASS	AB=0.816;AC=15;AF=0.278;AN=54;BaseQRankSum=-3.743;DP=356;FS=5.604;HRun=11;HaplotypeScore=52.3250;InbreedingCoeff=0.4666;MQ=71.81;MQ0=2;MQRankSum=-1.200;QD=14.12;ReadPosRankSum=4.881;VQSLOD=1.3805;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:27:21.48:0,21,211	0/0:6,0:6:12.01:0,12,129	0/1:14,1:14:40.17:40,0,104	0/1:6,0:6:3.02:3,0,79	0/1:5,1:6:15.44:26,0,15	1/1:6,12:19:32.81:331,33,0	0/0:8,1:27:15.88:0,16,122	0/0:12,0:12:17.25:0,17,117	1/1:3,15:17:51.13:541,51,0	0/0:8,0:9:11.14:0,11,85	./.	1/1:2,16:17:39.09:415,39,0	0/1:5,1:13:3.47:3,0,75	0/0:11,0:16:26.46:0,26,137	0/0:5,0:10:5.96:0,6,48	0/0:1,0:8:4.36:0,4,31	0/0:16,0:23:32.94:0,33,285	0/0:7,0:7:7.57:0,8,79	0/0:6,0:6:5.27:0,5,31	0/0:6,0:7:8.89:0,9,64	0/0:24,0:24:26.98:0,27,266	0/1:7,5:14:42.41:69,0,42	1/1:2,11:13:29.85:319,30,0	1/1:0,12:12:30.08:319,30,0	0/0:13,0:13:26.34:0,26,212	0/0:7,0:7:2.62:0,3,19	0/0:8,0:9:10.32:0,10,65	0/0:3,0:7:9.01:0,9,97
chr10	81713231	.	TA	T	3711.79	PASS	AC=44;AF=0.957;AN=46;BaseQRankSum=0.019;DP=272;FS=2.783;HRun=10;HaplotypeScore=36.4641;InbreedingCoeff=0.5516;MQ=45.09;MQ0=45;MQRankSum=2.466;QD=16.21;ReadPosRankSum=-0.219;VQSLOD=3.2077;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:6:15.04:0,15,163	./.	./.	1/1:1,15:16:38.82:319,39,0	1/1:19,0:16:9.24:95,9,0	1/1:1,3:3:9:78,9,0	./.	1/1:9,0:9:15.37:58,15,0	1/1:2,12:14:32.94:330,33,0	1/1:2,12:14:35.98:310,36,0	1/1:7,0:6:7.48:26,7,0	1/1:0,4:4:12:104,12,0	1/1:0,3:3:9:78,9,0	1/1:2,7:9:18:156,18,0	1/1:2,4:6:12:104,12,0	1/1:4,5:6:13.14:127,13,0	1/1:3,10:10:20.99:182,21,0	1/1:8,12:15:35.93:301,36,0	1/1:3,7:9:21:182,21,0	1/1:1,4:4:6:52,6,0	./.	1/1:3,0:3:5.19:19,5,0	1/1:3,0:3:5.19:19,5,0	1/1:1,12:13:29.98:259,30,0	1/1:2,16:17:47.90:401,48,0	1/1:3,11:12:23.99:208,24,0	1/1:2,14:16:27.20:301,27,0
chr10	81715334	.	C	CTATTATTAT	822.36	PASS	AB=1.000;AC=5;AF=0.096;AN=52;BaseQRankSum=-2.639;DP=232;FS=7.914;HRun=0;HaplotypeScore=61.0421;InbreedingCoeff=0.3838;MQ=66.01;MQ0=1;MQRankSum=-2.650;QD=17.13;ReadPosRankSum=-3.498;VQSLOD=-0.1340;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,5:10:3.01:139,3,0	0/0:5,0:5:15.05:0,15,390	0/0:7,0:4:11.97:0,12,155	0/1:8,0:6:7.02:7,0,19	0/0:16,0:16:27.06:0,27,517	0/0:15,0:15:27.06:0,27,610	0/0:3,0:3:6.01:0,6,157	1/1:29,0:28:57.08:787,57,0	0/0:1,0:1:3.01:0,3,51	0/0:2,0:2:3.01:0,3,85	0/0:7,0:7:12.01:0,12,206	0/0:1,0:1:3.01:0,3,85	0/0:11,0:11:27.09:0,27,739	./.	0/0:5,0:5:9.01:0,9,194	0/0:6,0:6:12.02:0,12,208	0/0:20,0:20:51.13:0,51,1181	0/0:10,0:10:14.94:0,15,357	0/0:17,0:16:18.03:0,18,288	./.	0/0:3,0:3:6:0,6,109	0/0:1,0:1:3.01:0,3,85	0/0:4,0:4:9.01:0,9,161	0/0:2,0:2:3.01:0,3,85	0/0:10,0:10:17.99:0,18,295	0/0:9,0:9:18.04:0,18,359	0/0:5,0:5:12.04:0,12,304	0/0:23,0:23:60.10:0,60,1337
chr10	81716466	.	TAC	T	16068.93	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=10.452;DP=604;FS=1.873;HRun=0;HaplotypeScore=77.5482;InbreedingCoeff=0.9958;MQ=68.03;MQ0=2;MQRankSum=-2.651;QD=33.06;ReadPosRankSum=7.534;VQSLOD=6.7735;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:63.21:0,63,1100	0/0:12,0:12:33.09:0,33,548	0/0:17,0:16:45.15:0,45,763	0/0:19,0:17:42.14:0,42,682	1/1:0,37:37:96.32:1319,96,0	1/1:1,17:18:45.15:618,45,0	1/1:1,6:7:15.05:206,15,0	0/0:44,0:44:99:0,114,1914	1/1:2,22:24:54.18:742,54,0	1/1:2,26:28:81.25:1094,81,0	1/1:2,29:30:72.24:989,72,0	1/1:2,11:12:30.10:412,30,0	1/1:1,20:21:48.16:659,48,0	1/1:3,17:20:42.14:577,42,0	1/1:0,26:26:78.26:1071,78,0	1/1:0,23:23:57.19:783,57,0	1/1:0,14:14:30.10:412,30,0	1/1:1,21:22:63.21:862,63,0	1/1:5,15:20:45.15:615,45,0	1/1:0,28:28:60.20:824,60,0	1/1:0,17:17:42.14:577,42,0	1/1:4,20:24:45.15:618,45,0	1/1:0,16:16:36.12:495,36,0	1/1:0,16:16:42.14:577,42,0	1/1:2,20:22:48.16:659,48,0	1/1:0,17:17:51.15:683,51,0	1/1:3,24:27:63.21:865,63,0	1/1:1,14:15:30.10:412,30,0
chr10	81717166	.	T	TCACA	6632.44	PASS	AB=0.776;AC=40;AF=0.714;AN=56;BaseQRankSum=-2.718;DP=818;FS=6.169;HRun=0;HaplotypeScore=229.0021;InbreedingCoeff=-0.0235;MQ=57.14;MQ0=12;MQRankSum=1.881;QD=8.76;ReadPosRankSum=1.540;VQSLOD=3.3642;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:23:7.93:17,0,8	0/0:16,0:16:33.11:0,33,545	0/1:50,0:23:17.01:17,0,179	0/0:44,0:17:23.02:0,23,226	0/1:14,0:26:0:0,0,0	1/1:11,9:20:24.08:585,24,0	1/1:17,0:29:10.08:135,10,0	0/1:5,0:26:9.68:10,0,88	1/1:10,16:28:23.97:588,24,0	1/1:33,1:37:13.58:803,14,0	0/1:21,0:29:23.38:71,0,23	0/1:14,26:41:57.13:779,0,57	1/1:19,0:34:8.77:124,9,0	0/1:14,0:24:26.61:79,0,27	0/1:23,0:25:6.83:7,0,76	0/1:18,1:27:40.20:40,0,46	0/1:17,0:27:13.09:42,0,13	1/1:9,0:9:3.17:49,3,0	1/1:14,0:17:7.48:154,7,0	1/1:17,1:35:6.43:118,6,0	1/1:39,1:39:12.90:214,13,0	0/1:12,0:39:43.56:169,0,44	1/1:11,17:29:18.06:441,18,0	1/1:17,24:41:47.84:1162,48,0	0/1:8,1:21:17.56:67,0,18	1/1:12,0:32:31.06:436,31,0	1/1:28,0:29:2.92:429,3,0	1/1:1,0:3:6.02:95,6,0
chr10	81717274	.	T	TCA	10090.03	PASS	AB=0.832;AC=41;AF=0.759;AN=54;BaseQRankSum=2.452;DP=880;FS=0.464;HRun=0;HaplotypeScore=246.9459;InbreedingCoeff=0.3045;MQ=42.07;MQ0=47;MQRankSum=3.951;QD=13.24;ReadPosRankSum=1.890;VQSLOD=4.0353;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:44:72.56:0,73,898	0/0:11,0:10:29.89:0,30,364	./.	0/1:24,0:2:0.23:0,0,2	1/1:19,7:23:45.15:670,45,0	1/1:13,0:14:5.99:50,6,0	1/1:29,0:21:6.25:33,6,0	0/0:48,0:28:63.15:0,63,802	1/1:31,0:36:25.04:174,25,0	1/1:26,11:35:39.52:1070,40,0	1/1:22,2:24:36.08:553,36,0	1/1:24,13:39:47.91:698,48,0	0/1:27,0:33:72.21:72,0,142	0/1:17,1:41:14.84:107,0,15	1/1:28,11:38:42.05:779,42,0	1/1:27,10:35:60.52:833,61,0	0/1:40,7:47:3.99:650,0,4	1/1:28,3:30:11.96:622,12,0	0/1:13,1:9:34.96:103,0,35	0/1:17,6:22:5.47:391,0,5	1/1:82,5:72:42.91:748,43,0	1/1:23,1:26:5.25:52,5,0	1/1:20,0:21:7.17:72,7,0	1/1:20,0:24:1.77:4,2,0	1/1:24,5:28:47.57:732,48,0	0/1:28,10:37:51.55:890,0,52	1/1:14,10:24:60.06:740,60,0	1/1:6,0:4:3.01:46,3,0
chr10	81717294	.	TCA	T	5868.61	PASS	AB=0.895;AC=31;AF=0.574;AN=54;BaseQRankSum=3.350;DP=813;FS=2.781;HRun=0;HaplotypeScore=236.8352;InbreedingCoeff=0.2306;MQ=42.52;MQ0=49;MQRankSum=3.242;QD=9.73;ReadPosRankSum=3.954;VQSLOD=4.3708;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:42:56.92:0,57,938	0/0:9,0:9:24.05:0,24,385	0/0:37,0:8:16.56:0,17,175	0/1:55,0:10:14.21:14,0,50	1/1:17,8:22:41.91:520,42,0	0/0:8,1:9:1.62:0,2,11	0/0:19,1:14:1.32:0,1,3	0/0:49,0:30:72.18:0,72,1176	0/1:29,1:29:31.55:50,0,32	1/1:19,16:34:49.71:730,50,0	1/1:14,8:21:39.09:495,39,0	0/1:30,1:29:28.86:105,0,29	0/1:22,2:21:29.85:30,0,37	0/0:33,3:32:6.66:0,7,37	1/1:18,18:32:25.20:330,25,0	1/1:16,12:24:39.05:444,39,0	0/1:35,0:35:15.54:250,0,16	0/1:21,5:25:36.89:329,0,37	1/1:7,4:7:14.28:190,14,0	0/1:16,9:24:46.93:253,0,47	1/1:55,25:64:46.22:504,46,0	0/1:22,2:20:1.47:22,0,1	1/1:11,0:10:2.16:4,2,0	1/1:22,0:22:4.17:35,4,0	1/1:19,10:27:43.86:559,44,0	0/1:19,10:29:24.25:515,0,24	1/1:10,13:22:44.52:490,45,0	./.
chr10	81717301	.	CAT	C	2101.81	PASS	AB=0.994;AC=23;AF=0.426;AN=54;BaseQRankSum=4.974;DP=834;FS=2.481;HRun=0;HaplotypeScore=263.7518;InbreedingCoeff=0.1867;MQ=44.28;MQ0=49;MQRankSum=3.344;QD=3.84;ReadPosRankSum=3.906;VQSLOD=2.7017;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:53.54:0,54,942	0/0:8,0:8:21.06:0,21,348	0/0:52,0:10:21.04:0,21,343	0/1:71,0:14:41.24:41,0,76	1/1:25,0:22:32.53:187,33,0	0/0:11,0:11:7.81:0,8,73	0/0:20,0:15:2.48:0,2,20	0/0:45,0:29:78.10:0,78,1314	0/1:32,0:30:0.13:0,0,141	0/1:32,1:31:4.63:333,0,5	1/1:25,1:25:34.59:207,35,0	0/0:30,0:29:8.11:0,8,281	0/0:23,0:20:8.49:0,8,170	0/0:33,0:29:19.88:0,20,198	1/1:33,1:30:23.18:127,23,0	1/1:29,2:28:36.07:200,36,0	0/1:29,1:30:10.06:171,0,10	0/1:24,0:24:49.20:127,0,49	0/1:12,0:8:16.54:64,0,17	0/1:32,0:31:44.48:93,0,44	0/1:74,0:60:11.83:133,0,12	0/1:25,0:21:5.79:6,0,70	0/0:11,0:10:5.56:0,6,46	0/1:21,0:21:3.44:3,0,15	1/1:30,0:27:43.83:217,44,0	0/1:25,0:25:38.46:160,0,38	1/1:21,2:22:5.60:206,6,0	./.
chr10	81717712	.	AACAC	A	6306.60	PASS	AB=0.882;AC=38;AF=0.731;AN=52;BaseQRankSum=-0.769;DP=740;FS=8.991;HRun=0;HaplotypeScore=134.9923;InbreedingCoeff=0.6763;MQ=60.41;MQ0=19;MQRankSum=-1.652;QD=12.90;ReadPosRankSum=2.669;VQSLOD=4.1683;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:46:44.87:0,45,818	0/0:12,0:12:14.98:0,15,304	./.	./.	1/1:15,13:30:20.76:236,21,0	0/0:20,0:19:9.48:0,9,117	1/1:11,10:20:10.73:161,11,0	1/1:28,5:31:17.23:188,17,0	0/0:12,0:12:11.78:0,12,150	1/1:11,14:24:29.42:462,29,0	1/1:5,6:11:8.98:95,9,0	0/0:26,0:23:12.17:0,12,165	1/1:10,17:27:39.16:662,39,0	1/1:13,10:22:30.09:443,30,0	1/1:7,14:22:21.53:311,22,0	1/1:6,11:17:14.83:208,15,0	1/1:8,15:23:17.31:344,17,0	1/1:11,3:14:3.04:249,3,0	0/1:18,6:20:6.66:175,0,7	1/1:13,17:28:27.09:432,27,0	1/1:33,31:61:25.57:796,26,0	1/1:14,7:21:27.08:403,27,0	0/0:26,0:24:6.42:0,6,138	0/1:26,1:25:35.11:35,0,102	1/1:6,9:15:15.04:201,15,0	1/1:13,12:25:25.13:358,25,0	1/1:10,11:21:0.50:215,0,0	1/1:2,10:12:21.07:332,21,0
chr10	81718478	.	T	TA	270.95	PASS	AC=4;AF=0.67;AN=6;BaseQRankSum=-1.883;DP=61;FS=0.000;HRun=11;HaplotypeScore=32.0075;MQ=28.13;MQ0=23;MQRankSum=0.135;QD=7.13;ReadPosRankSum=-2.691;VQSLOD=-0.1071;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,11:14:5.80:44,6,0	0/0:4,0:4:8.96:0,9,70	./.	./.	./.	./.	./.	1/1:8,13:18:32.97:301,33,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	81719774	.	GGT	G	1220.61	PASS	AB=0.964;AC=15;AF=0.268;AN=56;BaseQRankSum=5.018;DP=729;FS=22.937;HRun=0;HaplotypeScore=139.7370;InbreedingCoeff=0.4603;MQ=50.02;MQ0=84;MQRankSum=4.163;QD=4.52;ReadPosRankSum=-0.253;VQSLOD=1.3746;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:17:19.49:19,0,24	0/0:17,0:14:29.91:0,30,294	0/0:32,0:12:20.71:0,21,201	0/0:36,0:11:2.76:0,3,105	0/0:29,0:28:42.09:0,42,606	0/1:15,2:17:4.44:62,0,4	1/1:12,2:14:18.43:227,18,0	0/0:29,0:16:7.68:0,8,37	1/1:21,4:21:3.70:135,4,0	0/0:28,0:25:58.01:0,58,840	0/0:28,0:23:29.52:0,30,405	0/1:32,1:27:27.95:156,0,28	1/1:21,4:23:42.01:478,42,0	1/1:28,0:21:3.01:36,3,0	0/0:29,0:27:54.01:0,54,720	0/0:25,0:25:49.55:0,50,528	0/0:16,0:15:32:0,32,353	0/0:15,0:13:1.89:0,2,203	0/0:21,0:19:33.07:0,33,420	0/0:24,0:18:30.45:0,30,344	0/0:50,0:45:80.93:0,81,1161	1/1:23,0:21:6:55,6,0	0/1:20,1:18:2.03:16,0,2	0/1:54,0:49:32.74:204,0,33	0/0:19,0:17:33.47:0,33,445	0/0:31,0:25:49.46:0,49,709	0/0:16,0:16:15.41:0,15,228	0/0:12,0:11:29.10:0,29,389
chr10	81719783	.	GTGGTGTGTGTGTGTGTGT	G	2252.06	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=3.978;DP=717;FS=12.424;HRun=0;HaplotypeScore=284.2784;InbreedingCoeff=0.7717;MQ=46.62;MQ0=89;MQRankSum=-1.472;QD=17.59;ReadPosRankSum=-3.868;VQSLOD=0.4406;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:20:7.58:8,0,345	0/0:16,0:13:31.35:0,31,1764	0/0:23,0:8:20.71:0,21,202	0/0:28,0:6:2.76:0,3,105	0/0:33,0:32:39.47:0,39,919	0/0:20,0:20:28.27:0,28,1484	1/1:14,0:14:30.01:433,30,0	0/0:26,0:12:19.87:0,20,383	0/0:24,0:20:18.38:0,18,1000	0/0:27,0:24:43.28:0,43,1511	0/0:25,0:20:32.71:0,33,942	0/0:33,0:27:42.40:0,42,1823	1/1:24,4:26:69.17:1533,69,0	1/1:6,21:20:3.01:104,3,0	0/0:27,0:26:40.61:0,41,1497	0/0:24,0:24:25.43:0,25,932	0/0:17,0:15:34.61:0,35,759	0/0:17,0:14:42.04:0,42,785	0/0:16,0:12:33.10:0,33,765	0/0:24,0:17:22.16:0,22,700	0/0:53,0:46:79.53:0,80,1968	1/1:4,21:24:9.02:324,9,0	0/0:21,0:18:31.67:0,32,1505	0/0:54,0:50:85.80:0,86,4082	0/0:19,0:17:36.11:0,36,998	0/0:31,0:25:54.25:0,54,1143	0/0:14,0:14:26.35:0,26,711	0/0:15,0:13:30.10:0,30,705
chr10	81719785	.	GGTGTGTGT	G	3481.88	PASS	AB=0.933;AC=32;AF=0.615;AN=52;BaseQRankSum=0.316;DP=712;FS=0.599;HRun=0;HaplotypeScore=187.0446;InbreedingCoeff=0.5891;MQ=46.86;MQ0=89;MQRankSum=-4.536;QD=7.95;ReadPosRankSum=-1.825;VQSLOD=2.0873;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:20:14.54:0,15,162	0/0:17,0:14:24.08:0,24,725	./.	./.	1/1:21,9:31:9.23:88,9,0	0/0:20,0:20:30.09:0,30,618	1/1:16,0:16:8.76:68,9,0	0/0:25,0:12:21:0,21,222	0/0:23,0:20:21.54:0,22,449	1/1:23,4:24:21.06:393,21,0	1/1:19,6:20:6.48:151,6,0	0/0:31,0:27:27.08:0,27,673	1/1:26,0:24:27.64:318,28,0	1/1:27,0:20:1.25:3,1,0	1/1:20,0:25:2.83:39,3,0	1/1:12,10:22:18.02:384,18,0	0/1:15,1:15:63.58:77,0,64	0/1:14,1:14:22.76:89,0,23	1/1:14,1:11:5.88:90,6,0	1/1:13,11:18:21.03:417,21,0	0/1:53,0:45:0.42:262,0,0	1/1:26,0:24:8.96:130,9,0	0/0:21,0:18:27.08:0,27,569	0/0:52,0:51:65.20:0,65,1632	1/1:15,4:18:14.40:214,14,0	1/1:22,10:26:35.98:574,36,0	1/1:9,6:14:8.04:117,8,0	0/1:13,3:14:31.71:69,0,32
chr10	81719794	.	GTGTGTGT	G	1498.30	PASS	AB=0.971;AC=17;AF=0.304;AN=56;BaseQRankSum=9.151;DP=720;FS=11.230;HRun=0;HaplotypeScore=175.0063;InbreedingCoeff=-0.1867;MQ=43.64;MQ0=97;MQRankSum=-6.763;QD=4.53;ReadPosRankSum=2.353;VQSLOD=2.2057;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:21:26.82:0,27,503	0/0:17,0:14:33.11:0,33,917	0/0:22,0:1:2.80:0,3,13	0/0:36,0:4:6.01:0,6,100	0/1:32,0:31:7.03:7,0,426	0/0:18,0:18:35.99:0,36,916	0/1:9,9:19:99:181,0,131	0/0:29,0:14:34.93:0,35,680	0/0:21,0:17:37.44:0,37,890	0/1:22,0:20:99:117,0,432	0/1:24,0:19:43.25:43,0,263	0/0:31,0:26:60.16:0,60,1311	0/1:25,1:23:99:663,0,138	1/1:28,0:21:4.41:13,4,0	0/0:26,0:24:4.77:0,5,393	0/1:19,0:19:99:138,0,147	0/1:17,0:16:6.50:7,0,265	0/0:19,0:16:0.17:0,0,387	0/1:15,0:11:10.33:10,0,180	0/1:24,0:16:99:156,0,104	0/0:51,0:45:3.90:0,4,730	1/1:26,0:24:9.02:135,9,0	0/0:21,0:18:45.15:0,45,1039	0/0:61,0:56:99:0,130,2905	0/1:19,0:17:75.56:76,0,214	0/1:28,0:23:87.25:87,0,338	0/1:13,0:13:10.48:10,0,247	0/1:15,0:13:8.94:9,0,312
chr10	81719800	.	GT	G	348.15	PASS	AB=0.874;AC=5;AF=0.093;AN=54;BaseQRankSum=6.390;DP=720;FS=3.849;HRun=1;HaplotypeScore=135.6977;InbreedingCoeff=0.2909;MQ=43.89;MQ0=95;MQRankSum=-7.929;QD=3.55;ReadPosRankSum=-1.426;VQSLOD=-0.2238;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:22:27.35:0,27,338	0/0:17,0:14:28.75:0,29,338	./.	0/0:34,0:3:5.97:0,6,57	0/0:33,0:32:47.65:0,48,592	0/0:19,0:19:38.25:0,38,481	0/1:15,3:18:81.14:81,0,97	0/0:30,0:17:44.35:0,44,583	0/0:22,0:18:36.47:0,36,488	0/0:21,0:18:47.23:0,47,574	0/0:25,0:20:25.58:0,26,340	0/0:34,0:29:65.18:0,65,763	0/1:18,8:23:99:342,0,121	0/1:28,0:21:2.24:2,0,30	0/0:26,0:24:43.43:0,43,500	0/0:17,0:17:11.07:0,11,155	0/0:18,0:16:29.86:0,30,336	0/0:19,0:15:21.40:0,21,355	0/0:14,0:10:26.92:0,27,337	0/0:24,0:16:20.51:0,21,183	0/0:55,0:46:66.35:0,66,1070	1/1:26,0:24:7.34:30,7,0	0/0:21,0:18:45.15:0,45,607	0/0:59,0:54:99:0,125,1547	0/0:22,0:20:33.93:0,34,416	0/0:25,0:19:46.15:0,46,514	0/0:15,0:14:27.97:0,28,359	0/0:15,0:13:24.41:0,24,312
chr10	81719907	.	G	GTTAA	33135.45	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-8.335;DP=579;FS=4.967;HRun=0;HaplotypeScore=71.1503;InbreedingCoeff=0.9972;MQ=78.17;MQ0=4;MQRankSum=-8.916;QD=62.28;ReadPosRankSum=4.675;VQSLOD=6.7181;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:24:54.19:1425,54,0	0/0:9,0:9:27.09:0,27,490	0/0:15,0:15:35.14:0,35,580	0/0:23,0:23:57.19:0,57,1001	1/1:2,14:16:42.08:1006,42,0	1/1:3,21:26:57.20:1464,57,0	1/1:1,18:19:45.15:1187,45,0	1/1:3,18:22:63.22:1590,63,0	1/1:1,19:20:48.16:1259,48,0	1/1:4,20:23:57.17:1398,57,0	1/1:2,13:16:39.13:1028,39,0	1/1:2,17:21:51.18:1346,51,0	1/1:4,24:28:75.26:1966,75,0	1/1:4,19:23:51.17:1305,51,0	1/1:2,17:21:48.16:1266,48,0	1/1:4,18:22:48.16:1266,48,0	1/1:2,9:11:30.10:788,30,0	1/1:2,8:12:27.09:707,27,0	1/1:5,9:15:39.13:915,39,0	1/1:4,26:31:87.23:2022,87,0	1/1:2,9:11:20.99:491,21,0	1/1:2,29:31:90.31:2325,90,0	1/1:0,24:23:57.20:1504,57,0	1/1:0,17:17:33.11:871,33,0	1/1:5,24:31:78.20:1916,78,0	1/1:2,23:24:69.24:1782,69,0	1/1:3,20:25:60.21:1561,60,0	1/1:1,9:11:30.10:748,30,0
chr10	81720669	.	AC	A	7727.03	PASS	AB=0.958;AC=47;AF=0.839;AN=56;BaseQRankSum=6.874;DP=586;FS=14.669;HRun=9;HaplotypeScore=94.6393;InbreedingCoeff=0.8576;MQ=76.82;MQ0=0;MQRankSum=-3.367;QD=15.21;ReadPosRankSum=5.184;VQSLOD=3.6387;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.18:0,66,750	0/0:10,0:10:27.08:0,27,311	0/1:22,1:23:12.81:13,0,314	0/0:16,0:15:16.35:0,16,264	1/1:6,21:27:59.95:539,60,0	1/1:4,0:27:46.85:138,47,0	1/1:3,0:17:28.51:84,29,0	0/0:27,1:28:14.63:0,15,405	1/1:2,0:14:22.40:66,22,0	1/1:4,15:19:48.02:439,48,0	1/1:4,28:32:84.04:767,84,0	1/1:0,0:18:32.59:96,33,0	1/1:3,0:18:30.55:90,31,0	1/1:1,0:26:48.89:144,49,0	1/1:0,16:16:42.02:384,42,0	1/1:1,30:32:74.87:672,75,0	1/1:3,25:28:69.03:631,69,0	1/1:1,4:5:12:110,12,0	1/1:4,19:23:54.01:493,54,0	1/1:5,18:23:59.93:530,60,0	1/1:3,7:12:25.08:204,25,0	1/1:1,0:28:50.93:150,51,0	1/1:3,0:22:32.59:96,33,0	1/1:0,0:14:26.48:78,26,0	1/1:4,27:31:87.03:796,87,0	1/1:4,12:16:39.01:356,39,0	1/1:5,19:24:54.02:494,54,0	1/1:0,13:13:39.02:357,39,0
chr10	81723573	.	TTA	T	1554.35	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=6.220;DP=460;FS=10.393;HRun=0;HaplotypeScore=59.7553;InbreedingCoeff=0.7020;MQ=69.67;MQ0=1;MQRankSum=-2.915;QD=21.59;ReadPosRankSum=-0.131;VQSLOD=2.9247;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.08:0,51,749	0/0:3,0:3:9.02:0,9,128	0/0:13,0:12:27.04:0,27,359	0/1:9,0:9:4.03:4,0,247	0/0:39,0:38:99:0,114,1855	0/0:18,0:18:4.10:0,4,183	0/0:10,0:10:30.08:0,30,472	0/0:28,0:28:81.22:0,81,1165	0/0:15,0:15:11.12:0,11,185	0/0:27,0:27:81.26:0,81,1297	0/0:23,0:23:69.20:0,69,1113	0/0:16,0:16:4.63:0,5,154	1/1:0,18:18:42.14:642,42,0	1/1:3,13:15:45.13:626,45,0	0/0:17,0:17:48.14:0,48,766	0/0:6,0:6:18.05:0,18,266	0/0:13,0:13:39.07:0,39,578	0/0:15,0:15:45.09:0,45,695	0/0:14,0:14:39.09:0,39,559	0/0:24,0:24:69.19:0,69,1094	0/0:9,0:9:24.06:0,24,387	1/1:0,12:12:32.98:424,33,0	0/1:17,0:17:1.58:2,0,174	0/0:8,0:8:23.40:0,23,137	0/0:17,0:17:51.17:0,51,845	0/0:16,0:16:47.81:0,48,721	0/0:25,0:24:75.19:0,75,1129	0/0:13,0:13:33.11:0,33,534
chr10	81723994	.	A	AT	1837.39	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=0.000;DP=685;FS=0.000;HRun=8;HaplotypeScore=67.3425;InbreedingCoeff=0.9921;MQ=77.00;MQ0=0;MQRankSum=-1.379;QD=25.88;ReadPosRankSum=1.777;VQSLOD=4.3763;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:90.04:0,90,823	0/0:12,0:12:32.99:0,33,295	0/0:18,0:19:35.03:0,35,300	0/0:11,0:11:24.01:0,24,217	0/0:32,0:32:77.94:0,78,721	0/0:34,0:34:96.05:0,96,879	0/0:13,0:13:27.01:0,27,247	0/0:40,0:39:96.03:0,96,878	0/0:21,0:21:51.01:0,51,462	0/0:25,0:25:48.01:0,48,439	0/0:35,0:36:92.07:0,92,829	0/0:9,0:9:24.01:0,24,220	1/1:3,19:22:51.15:589,51,0	1/1:4,24:28:66.20:762,66,0	0/0:13,0:13:36.02:0,36,330	0/0:29,0:29:81.02:0,81,737	0/0:33,0:33:90.03:0,90,819	0/0:15,0:15:36.01:0,36,329	0/0:22,0:22:42.01:0,42,384	0/0:40,0:40:99:0,108,986	0/0:31,0:31:81.02:0,81,737	1/1:3,18:21:32.71:630,33,0	0/0:28,0:28:72.04:0,72,659	0/0:25,0:25:72.03:0,72,659	0/0:22,0:22:60.03:0,60,549	0/0:31,0:31:87.05:0,87,796	0/0:31,0:32:95.09:0,95,856	0/0:6,0:6:15.01:0,15,137
chr10	81724824	.	T	TA	1139.14	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.911;DP=615;FS=1.313;HRun=9;HaplotypeScore=58.6490;InbreedingCoeff=0.9546;MQ=75.45;MQ0=0;MQRankSum=-0.461;QD=22.34;ReadPosRankSum=-4.729;VQSLOD=2.2622;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:42.11:464,42,0	0/0:7,0:7:18:0,18,156	0/0:16,0:16:23.95:0,24,204	0/0:10,0:10:8.91:0,9,72	0/0:34,0:34:92.95:0,93,803	0/0:32,0:32:86.98:0,87,755	0/0:4,0:14:14.25:0,14,42	1/1:9,25:34:72.19:796,72,0	0/0:23,0:23:56.94:0,57,486	0/0:27,0:27:80.98:0,81,703	0/0:31,0:31:74.93:0,75,644	0/0:20,0:20:53.98:0,54,469	0/0:31,0:31:74.95:0,75,650	0/0:25,0:25:71.98:0,72,625	0/0:18,0:18:47.97:0,48,413	0/0:20,0:20:29.48:0,29,415	0/0:18,0:18:47.99:0,48,417	0/0:12,0:12:26.12:0,26,233	0/0:20,0:20:53.96:0,54,466	0/0:24,0:24:65.98:0,66,573	0/0:15,0:15:38.99:0,39,339	0/0:25,0:25:71.97:0,72,625	0/0:31,0:31:71.93:0,72,620	0/0:22,0:22:59.98:0,60,521	0/0:23,0:23:65.99:0,66,573	0/0:22,0:22:56.97:0,57,495	0/0:32,0:32:86.92:0,87,748	0/0:12,0:12:26.97:0,27,234
chr10	81725165	.	AACACAC	A	1877.34	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=2.932;DP=637;FS=3.332;HRun=0;HaplotypeScore=190.2192;InbreedingCoeff=0.7313;MQ=57.01;MQ0=7;MQRankSum=-3.183;QD=15.64;ReadPosRankSum=0.979;VQSLOD=3.3568;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:2.84:0,3,78	1/1:0,0:1:0.89:2,1,0	0/0:33,0:22:5.99:0,6,67	0/0:35,0:25:12.04:0,12,278	0/0:29,0:32:6.36:0,6,123	1/1:4,13:18:24.08:473,24,0	0/0:16,0:24:24.08:0,24,602	0/0:35,0:34:48.16:0,48,1322	1/1:10,12:25:36.08:613,36,0	0/0:26,0:24:42.14:0,42,1141	0/0:27,0:27:9.32:0,9,314	1/1:10,10:20:21.07:411,21,0	0/0:21,0:22:12.04:0,12,236	0/0:15,0:20:6.01:0,6,114	0/0:22,0:22:15.03:0,15,328	0/0:26,0:30:14.96:0,15,221	0/0:16,0:16:15.52:0,16,371	0/0:10,0:8:6.02:0,6,148	0/0:17,0:20:27.09:0,27,766	1/1:15,0:15:0.84:2,1,0	0/0:24,0:23:6.02:0,6,147	0/0:15,0:19:17.81:0,18,262	1/1:12,10:24:29.96:466,30,0	1/1:10,6:17:5.98:76,6,0	0/0:26,0:25:4.98:0,5,97	0/0:29,0:28:57.13:0,57,1513	0/0:25,0:23:27.09:0,27,731	0/0:15,0:15:13.60:0,14,320
chr10	81726180	.	TAC	T	1898.67	PASS	AB=0.899;AC=21;AF=0.375;AN=56;BaseQRankSum=8.959;DP=487;FS=3.171;HRun=0;HaplotypeScore=59.4743;InbreedingCoeff=0.4384;MQ=60.86;MQ0=10;MQRankSum=3.959;QD=8.51;ReadPosRankSum=-1.835;VQSLOD=2.7398;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,18:27:42.13:498,42,0	0/1:8,1:9:17.52:18,0,175	0/0:39,0:11:15.03:0,15,169	0/0:24,0:8:3.01:0,3,47	0/1:13,3:16:26.34:26,0,506	0/1:5,11:17:23.64:203,0,24	0/1:12,0:12:0:0,0,0	1/1:15,20:34:60.06:610,60,0	1/1:2,10:12:15.05:178,15,0	0/0:22,0:22:57.17:0,57,818	0/1:10,1:11:11.39:11,0,263	1/1:7,15:22:27.08:320,27,0	0/0:13,0:13:5.93:0,6,41	0/1:11,0:11:0:0,0,0	0/0:20,1:21:12.54:0,13,549	0/1:10,1:11:5.49:5,0,314	0/0:23,0:23:51.15:0,51,758	0/0:17,0:17:39.04:0,39,537	0/0:13,0:13:27.03:0,27,368	0/0:24,1:25:24.54:0,25,687	0/1:13,1:14:2.54:3,0,318	0/1:5,0:5:0:0,0,0	1/1:7,5:12:9.03:107,9,0	1/1:9,0:9:11.97:96,12,0	0/0:23,0:23:57.17:0,57,857	0/0:15,0:15:6.60:0,7,390	0/0:19,0:19:30.91:0,31,534	0/0:9,0:9:17.84:0,18,262
chr10	81728290	.	G	GT	1559.78	PASS	AB=0.923;AC=7;AF=0.125;AN=56;BaseQRankSum=-8.080;DP=622;FS=1.075;HRun=9;HaplotypeScore=61.2561;InbreedingCoeff=0.8714;MQ=78.73;MQ0=0;MQRankSum=-0.800;QD=19.74;ReadPosRankSum=1.780;VQSLOD=4.1355;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:32.99:0,33,287	0/0:12,0:12:15.01:0,15,239	0/0:13,0:13:26.98:0,27,231	0/0:16,0:16:29.15:0,29,205	0/0:24,0:24:50.95:0,51,443	0/0:23,1:25:25.82:0,26,441	0/0:20,0:20:53.99:0,54,469	0/0:38,0:38:86.91:0,87,747	0/0:17,0:17:38.97:0,39,338	0/0:33,0:33:83.97:0,84,729	0/0:27,0:27:65.97:0,66,572	0/0:14,0:14:41.99:0,42,365	1/1:4,16:20:19.44:439,19,0	1/1:1,20:21:57.15:631,57,0	0/0:30,0:30:80.98:0,81,703	0/0:17,0:17:47.96:0,48,413	0/0:25,0:25:65.98:0,66,572	0/0:11,0:11:22.75:0,23,228	0/0:27,0:27:50.92:0,51,435	0/0:45,0:45:99:0,114,986	0/0:18,0:18:47.99:0,48,416	1/1:3,23:26:57.15:631,57,0	0/0:17,2:19:14.80:0,15,358	0/0:15,0:15:40.52:0,41,337	0/0:23,0:22:54.29:0,54,490	0/0:26,0:26:62.93:0,63,540	0/0:35,0:36:88.98:0,89,756	0/1:11,1:12:3.21:3,0,200
chr10	81729388	.	TA	T	241.76	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.611;DP=560;FS=0.000;HRun=7;HaplotypeScore=51.6194;InbreedingCoeff=0.8204;MQ=65.35;MQ0=0;MQRankSum=0.223;QD=17.27;ReadPosRankSum=0.895;VQSLOD=3.1126;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1206	0/0:8,0:8:24.08:0,24,301	0/0:4,0:4:3.01:0,3,38	0/0:6,0:6:11.92:0,12,104	0/0:19,0:19:51.14:0,51,613	0/0:28,0:28:72.22:0,72,888	1/1:1,13:14:33.07:336,33,0	0/0:38,0:38:99:0,102,1220	0/0:17,0:17:51.16:0,51,639	0/0:33,0:33:81.21:0,81,967	0/0:23,0:23:60.18:0,60,740	0/0:18,0:18:54.17:0,54,676	0/0:25,0:25:69.20:0,69,839	0/0:17,0:17:51.15:0,51,626	0/0:16,0:16:42.13:0,42,515	0/0:16,0:16:48.12:0,48,564	0/0:33,0:34:76.90:0,77,971	0/0:16,0:15:42.07:0,42,503	0/0:16,0:16:36.11:0,36,440	0/0:35,0:35:93.24:0,93,1104	0/0:10,0:10:30.06:0,30,349	0/0:16,0:16:48.15:0,48,601	0/0:21,0:21:63.18:0,63,765	0/0:18,0:18:51.13:0,51,611	0/0:25,0:25:72.23:0,72,902	0/0:25,0:25:75.17:0,75,900	0/0:22,0:22:60.18:0,60,739	0/0:6,0:6:18.06:0,18,225
chr10	81730644	.	AAGGC	A	362.13	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.889;DP=561;FS=15.945;HRun=0;HaplotypeScore=91.9398;InbreedingCoeff=0.9972;MQ=83.28;MQ0=0;MQRankSum=-4.746;QD=45.27;ReadPosRankSum=-0.367;VQSLOD=3.1849;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:50.83:0,51,1318	0/0:12,0:12:36.12:0,36,972	0/0:20,0:20:51.18:0,51,1328	0/0:15,0:15:42.14:0,42,990	0/0:28,0:28:81.28:0,81,2150	0/0:29,0:29:81.28:0,81,2165	1/1:0,8:8:24.08:455,24,0	0/0:38,0:38:99:0,108,2866	0/0:16,0:16:45.15:0,45,1184	0/0:24,0:24:69.24:0,69,1851	0/0:26,0:26:72.23:0,72,1872	0/0:20,0:20:60.19:0,60,1556	0/0:14,0:14:39.13:0,39,1034	0/0:13,0:13:36.12:0,36,972	0/0:25,0:25:75.26:0,75,2025	0/0:19,0:19:54.19:0,54,1444	0/0:18,0:18:54.19:0,54,1456	0/0:17,0:17:51.09:0,51,1246	0/0:17,0:17:39.12:0,39,986	0/0:30,0:30:90.31:0,90,2429	0/0:17,0:17:45.15:0,45,1215	0/0:18,0:18:51.18:0,51,1346	0/0:16,0:16:42.13:0,42,1076	0/0:14,0:14:42.14:0,42,1133	0/0:15,0:15:45.15:0,45,1166	0/0:25,0:24:72.25:0,72,1928	0/0:36,0:36:99:0,99,2434	0/0:12,0:12:33.10:0,33,834
chr10	81731255	.	G	GA	316.94	PASS	AB=0.938;AC=3;AF=0.054;AN=56;BaseQRankSum=-4.232;DP=553;FS=2.057;HRun=9;HaplotypeScore=60.1668;InbreedingCoeff=0.6134;MQ=81.32;MQ0=0;MQRankSum=-0.250;QD=9.32;ReadPosRankSum=-2.950;VQSLOD=1.5342;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,123,1060	0/0:7,0:7:14.99:0,15,130	0/0:20,0:21:29.80:0,30,224	0/0:19,0:19:19.02:0,19,224	0/0:28,0:28:77.95:0,78,668	0/0:17,0:17:41.98:0,42,365	0/0:24,0:24:59.95:0,60,517	1/1:6,13:19:16.06:405,16,0	0/0:15,0:15:44.99:0,45,391	0/0:16,0:16:41.99:0,42,365	0/0:11,0:11:32.99:0,33,286	0/0:14,0:16:41.01:0,41,341	0/0:17,0:17:47.99:0,48,416	0/1:14,1:15:6.19:6,0,181	0/0:21,0:21:59.99:0,60,521	0/0:14,0:14:35.99:0,36,312	0/0:26,1:27:41.80:0,42,592	0/0:26,0:27:80.01:0,80,679	0/0:14,0:14:29.96:0,30,255	0/0:25,0:25:47.97:0,48,417	0/0:16,0:16:47.99:0,48,416	0/0:21,0:21:62.34:0,62,525	0/0:15,1:17:4.85:0,5,259	0/0:27,0:27:68.95:0,69,595	0/0:19,0:19:53.99:0,54,468	0/0:15,0:16:38.01:0,38,315	0/0:16,0:16:41.94:0,42,356	0/0:15,0:15:41.99:0,42,364
chr10	81731727	.	GGTGTGTGTGTGTGT	G	772.43	PASS	AB=0.845;AC=12;AF=0.250;AN=48;BaseQRankSum=4.733;DP=513;FS=8.922;HRun=0;HaplotypeScore=175.3691;InbreedingCoeff=0.1014;MQ=54.84;MQ0=23;MQRankSum=-5.567;QD=4.77;ReadPosRankSum=0.771;VQSLOD=1.9386;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:9.03:0,9,145	./.	./.	./.	0/0:13,0:15:4.54:0,5,73	0/1:14,5:20:91.25:369,0,91	0/0:19,0:19:12.51:0,13,445	0/0:26,0:24:2.58:0,3,183	1/1:19,5:23:2.96:117,3,0	0/0:20,0:21:1.92:0,2,94	1/1:8,2:10:3.01:117,3,0	1/1:17,1:18:5.98:137,6,0	0/0:11,0:11:15.04:0,15,392	0/0:16,0:16:21.07:0,21,484	0/0:16,0:16:6.02:0,6,111	0/1:11,0:11:11.71:12,0,36	0/1:21,0:25:71.99:72,0,150	0/1:21,0:25:20.58:21,0,71	0/0:15,0:14:4.26:0,4,45	0/0:10,0:12:9.03:0,9,263	0/0:30,0:26:21.06:0,21,471	0/0:11,0:13:18.06:0,18,499	./.	0/1:15,0:15:7:39,0,7	0/1:6,0:8:16.08:25,0,16	0/0:19,0:22:27.01:0,27,562	0/0:21,0:21:24.93:0,25,548	0/0:5,0:5:6.02:0,6,155
chr10	81732041	.	C	CCTGCATCCGCT	3708.46	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.626;DP=494;FS=3.559;HRun=0;HaplotypeScore=160.2826;InbreedingCoeff=0.9640;MQ=86.62;MQ0=0;MQRankSum=-7.099;QD=72.71;ReadPosRankSum=-2.906;VQSLOD=2.9184;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,8:34:42.14:2107,42,0	0/0:8,0:8:21.06:0,21,573	0/0:16,0:16:42.13:0,42,1117	0/0:18,0:18:42.12:0,42,1133	0/0:17,0:17:39.13:0,39,1298	0/0:13,0:12:33.11:0,33,1125	0/0:36,0:36:87.30:0,87,2839	1/1:12,1:17:45.13:1601,45,0	0/0:7,0:7:18.06:0,18,517	0/0:9,0:9:24.08:0,24,789	0/0:5,0:5:12.03:0,12,334	0/0:13,0:13:27.08:0,27,844	0/0:14,0:14:36.11:0,36,1135	0/0:22,0:22:63.22:0,63,2137	0/0:11,0:11:33.10:0,33,970	0/0:13,0:13:36.12:0,36,1228	0/0:32,0:32:96.32:0,96,3122	0/0:29,0:29:75.24:0,75,2361	0/0:21,0:21:51.10:0,51,1487	0/0:8,0:8:18.06:0,18,584	0/0:45,0:45:99:0,120,3852	0/0:15,0:15:38.29:0,38,1010	0/0:10,0:10:27.08:0,27,797	0/0:32,0:32:84.01:0,84,2571	0/0:15,0:15:39.13:0,39,1224	0/0:14,0:14:42.14:0,42,1241	0/0:15,0:15:36.12:0,36,1195	0/0:5,0:5:15.05:0,15,512
chr10	81732615	.	G	GA	10243.36	PASS	AB=0.699;AC=47;AF=0.839;AN=56;BaseQRankSum=-7.801;DP=496;FS=1.101;HRun=9;HaplotypeScore=48.8268;InbreedingCoeff=0.5360;MQ=80.48;MQ0=0;MQRankSum=-4.634;QD=23.07;ReadPosRankSum=1.435;VQSLOD=5.5489;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,37:41:67.21:969,67,0	0/0:3,0:3:9:0,9,78	0/1:12,0:12:4.95:5,0,99	0/0:18,1:19:2.65:0,3,221	1/1:1,13:15:35.81:339,36,0	1/1:1,18:19:45.12:498,45,0	0/0:30,0:30:80.95:0,81,695	1/1:6,20:26:57.12:612,57,0	1/1:1,19:20:57.12:618,57,0	1/1:2,12:15:15.97:379,16,0	1/1:1,5:7:18.05:199,18,0	1/1:7,18:25:34.33:538,34,0	1/1:3,9:12:1.02:239,1,0	0/1:5,16:21:6.98:386,0,7	1/1:0,9:9:27.07:299,27,0	1/1:5,16:21:39.11:431,39,0	1/1:7,18:25:11.05:569,11,0	1/1:3,24:27:60.12:650,60,0	1/1:4,18:21:48.09:510,48,0	1/1:3,6:9:21.04:224,21,0	1/1:5,21:26:11:563,11,0	1/1:0,4:4:12.03:133,12,0	0/1:1,8:9:5:177,0,5	1/1:4,17:21:45.12:498,45,0	1/1:3,13:16:39.11:431,39,0	1/1:2,17:20:30.90:531,31,0	1/1:1,7:9:17.88:180,18,0	1/1:1,12:13:24.06:265,24,0
chr10	81733667	.	T	TGCC	1805.62	PASS	AB=1.000;AC=15;AF=0.313;AN=48;BaseQRankSum=-2.261;DP=285;FS=0.000;HRun=0;HaplotypeScore=49.4052;InbreedingCoeff=0.6060;MQ=70.03;MQ0=0;MQRankSum=1.264;QD=21.50;ReadPosRankSum=-0.230;VQSLOD=2.7629;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,4:13:12:199,12,0	0/0:6,0:6:6.02:0,6,84	./.	0/1:7,0:8:1.31:1,0,17	0/0:6,0:6:2.87:0,3,15	1/1:0,4:4:6.02:120,6,0	0/0:25,0:25:51.14:0,51,693	1/1:6,0:6:0.94:1,1,0	1/1:4,0:4:3.01:59,3,0	0/0:7,0:7:12.03:0,12,152	./.	1/1:3,4:8:6.02:120,6,0	0/0:10,0:11:15.02:0,15,189	0/0:9,0:10:21.02:0,21,256	0/0:3,0:3:6.02:0,6,84	0/0:6,0:6:12.04:0,12,169	0/0:29,0:29:66.20:0,66,908	0/0:23,0:23:63.20:0,63,868	0/0:8,0:8:6:0,6,84	0/0:5,0:5:3.01:0,3,42	0/0:28,0:28:42.14:0,42,590	./.	1/1:5,0:5:0.47:1,0,0	1/1:6,30:36:72.25:1444,72,0	0/0:9,0:9:12.04:0,12,169	0/0:5,0:5:2.29:0,2,41	0/0:10,0:10:15.04:0,15,193	./.
chr10	81734079	.	A	AC	243.99	PASS	AB=0.710;AC=1;AF=0.018;AN=56;BaseQRankSum=-3.188;DP=639;FS=0.000;HRun=1;HaplotypeScore=63.6460;InbreedingCoeff=-0.0204;MQ=97.57;MQ0=0;MQRankSum=0.848;QD=11.09;ReadPosRankSum=0.099;VQSLOD=1.4865;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:66:99:0,199,2568	0/0:9,0:9:21.07:0,21,273	0/0:38,0:38:99:0,105,1279	0/0:28,0:28:81.26:0,81,1037	0/0:15,0:15:39.13:0,39,506	0/0:20,0:20:60.18:0,60,760	0/0:22,0:22:60.19:0,60,779	0/0:37,0:37:99:0,111,1440	0/0:19,0:19:54.17:0,54,691	0/1:13,9:22:99:318,0,422	0/0:14,0:14:36.12:0,36,466	0/0:21,0:21:63.20:0,63,817	0/0:21,0:21:57.18:0,57,739	0/0:19,0:19:42.12:0,42,531	0/0:12,0:12:30.10:0,30,389	0/0:20,0:20:60.18:0,60,764	0/0:32,0:32:96.29:0,96,1229	0/0:33,0:33:93.30:0,93,1206	0/0:27,0:27:78.25:0,78,1012	0/0:13,0:13:36.12:0,36,462	0/0:36,0:36:99:0,108,1399	0/0:12,0:12:36.12:0,36,467	0/0:11,0:11:29.61:0,30,374	0/0:29,0:29:87.26:0,87,1112	0/0:19,0:19:54.18:0,54,700	0/0:28,0:28:84.27:0,84,1091	0/0:13,0:13:36.12:0,36,467	0/0:3,0:3:9.03:0,9,117
chr10	81734254	.	CGT	C	880.16	PASS	AB=0.667;AC=33;AF=0.717;AN=46;BaseQRankSum=1.119;DP=601;FS=16.557;HRun=0;HaplotypeScore=81.1510;InbreedingCoeff=0.4279;MQ=65.92;MQ0=16;MQRankSum=2.161;QD=2.57;ReadPosRankSum=2.161;VQSLOD=0.5896;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:4,0:8:0.15:0,0,0	./.	./.	1/1:11,1:12:3.01:32,3,0	0/0:16,0:15:7.56:0,8,73	0/0:30,0:29:5.20:0,5,50	0/0:28,0:26:5.93:0,6,40	1/1:9,1:10:5.91:48,6,0	1/1:16,0:16:2.98:21,3,0	1/1:11,0:11:2.84:14,3,0	1/1:14,2:16:3:32,3,0	1/1:18,0:21:2.84:14,3,0	1/1:18,0:20:2.84:14,3,0	0/0:11,0:11:3.01:0,3,44	1/1:9,3:12:5.85:46,6,0	1/1:52,3:57:3.87:166,4,0	1/1:24,11:35:14.31:159,14,0	./.	1/1:9,2:11:6.02:64,6,0	1/1:27,6:34:8.86:78,9,0	./.	1/1:5,2:7:6.01:64,6,0	1/1:33,6:40:17.70:156,18,0	1/1:20,1:21:8.84:66,9,0	0/0:13,0:13:1.72:0,2,4	1/1:8,1:9:3:32,3,0	0/0:17,0:16:0.47:0,0,1
chr10	81734751	.	C	CT	9414.58	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-8.177;DP=566;FS=11.004;HRun=10;HaplotypeScore=65.8395;InbreedingCoeff=0.7798;MQ=77.50;MQ0=0;MQRankSum=-1.947;QD=18.83;ReadPosRankSum=2.837;VQSLOD=5.1703;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,30:40:29.16:696,29,0	0/0:8,0:8:20.97:0,21,172	0/0:13,0:14:2.58:0,3,85	0/0:18,0:18:9.06:0,9,123	1/1:7,17:24:1.78:357,2,0	1/1:6,12:21:14.36:324,14,0	1/1:3,12:16:26.94:271,27,0	0/0:3,0:25:41.20:0,41,119	1/1:6,17:23:45.11:480,45,0	1/1:3,17:20:48.09:496,48,0	1/1:3,17:22:28.70:426,29,0	1/1:7,21:29:33.01:534,33,0	1/1:5,0:18:22.94:123,23,0	1/1:2,0:16:25.57:128,26,0	1/1:2,19:21:31.60:550,32,0	1/1:9,12:21:5.43:263,5,0	1/1:2,24:26:44.53:679,45,0	1/1:6,26:32:47.53:705,48,0	1/1:11,14:26:44.50:464,44,0	1/1:2,16:18:45:442,45,0	1/1:2,14:16:33.08:352,33,0	1/1:1,0:12:17.75:96,18,0	1/1:1,7:8:18:179,18,0	1/1:1,14:15:36.09:384,36,0	1/1:3,13:16:2.44:231,2,0	1/1:2,18:21:53.94:531,54,0	1/1:6,25:30:32.50:551,33,0	1/1:2,5:8:11.19:154,11,0
chr10	81735218	.	G	GTCTTT	6122.41	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.228;DP=727;FS=3.430;HRun=0;HaplotypeScore=125.3005;InbreedingCoeff=0.9992;MQ=86.99;MQ0=0;MQRankSum=-4.570;QD=70.37;ReadPosRankSum=1.016;VQSLOD=6.0408;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.23:0,66,1368	0/0:10,0:10:24.08:0,24,485	0/0:28,0:29:62.46:0,62,1083	0/0:20,0:21:45.02:0,45,777	0/0:26,0:26:78.24:0,78,1541	0/0:39,0:39:99:0,111,2059	0/0:19,0:19:51.12:0,51,907	0/0:39,0:39:90.30:0,90,1827	0/0:21,0:21:60.18:0,60,1204	0/0:40,0:40:99:0,117,2358	0/0:32,0:32:93.28:0,93,1846	0/0:28,0:28:81.26:0,81,1640	1/1:1,23:25:60.21:1842,60,0	1/1:0,21:23:48.16:1474,48,0	0/0:31,0:31:81.22:0,81,1563	0/0:20,0:19:60.15:0,60,1094	0/0:28,0:28:72.19:0,72,1357	0/0:25,0:25:69.21:0,69,1371	0/0:23,0:23:66.20:0,66,1292	0/0:30,0:30:90.24:0,90,1784	0/0:19,0:19:57.18:0,57,1144	1/1:5,30:39:99:2807,105,0	0/0:24,0:24:72.17:0,72,1334	0/0:27,0:27:75.18:0,75,1400	0/0:21,0:21:63.19:0,63,1232	0/0:23,0:23:66.22:0,66,1322	0/0:28,0:28:84.22:0,84,1574	0/0:13,0:13:39.03:0,39,612
chr10	81735388	.	C	CTG	3963.47	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.650;DP=688;FS=6.074;HRun=0;HaplotypeScore=119.7390;InbreedingCoeff=0.9999;MQ=80.86;MQ0=0;MQRankSum=-1.992;QD=47.75;ReadPosRankSum=1.484;VQSLOD=4.5600;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:47.89:0,48,687	0/0:13,0:13:39.13:0,39,635	0/0:21,0:21:57.13:0,57,837	0/0:26,0:26:71.92:0,72,1033	0/0:37,0:37:99:0,108,1636	0/0:32,0:32:93.30:0,93,1490	0/0:21,0:21:57.17:0,57,902	0/0:38,0:38:99:0,108,1694	0/0:21,0:21:63.22:0,63,1026	0/0:30,0:29:90.30:0,90,1436	0/0:17,0:17:51.13:0,51,800	0/0:22,0:22:63.20:0,63,1002	1/1:2,30:32:78.27:1580,78,0	1/1:0,23:23:60.14:1150,60,0	0/0:31,0:31:93.27:0,93,1462	0/0:24,0:24:72.20:0,72,1142	0/0:15,0:15:39.05:0,39,555	0/0:20,0:20:57.19:0,57,928	0/0:23,0:23:66.16:0,66,1022	0/0:24,0:24:66.13:0,66,1019	0/0:36,0:36:99:0,108,1758	1/1:0,26:28:63.15:1234,63,0	0/0:24,0:24:72.15:0,72,1089	0/0:13,0:13:39.13:0,39,635	0/0:21,0:21:63.21:0,63,1004	0/0:27,0:27:75.21:0,75,1192	0/0:32,0:32:96.33:0,96,1562	0/0:20,0:20:60.20:0,60,968
chr10	81736484	.	GT	G	2779.50	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.420;DP=685;FS=12.365;HRun=1;HaplotypeScore=69.0869;InbreedingCoeff=0.9989;MQ=92.39;MQ0=1;MQRankSum=-1.182;QD=34.31;ReadPosRankSum=2.940;VQSLOD=2.7277;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1364	0/0:9,0:9:27.06:0,27,371	0/0:33,0:32:90.95:0,91,1170	0/0:28,0:28:71.35:0,71,894	0/0:26,0:26:78.10:0,78,1070	0/0:23,0:23:69.22:0,69,988	0/0:32,0:32:96.30:0,96,1365	0/0:31,0:31:87.23:0,87,1141	0/0:33,0:33:99:0,99,1386	0/0:32,0:32:93.28:0,93,1310	0/0:17,0:17:51.12:0,51,700	0/0:26,0:26:78.19:0,78,1063	1/1:1,26:27:69.23:961,69,0	1/1:0,27:27:75.25:1041,75,0	0/0:20,0:20:60.11:0,60,776	0/0:31,0:31:93.27:0,93,1301	0/0:20,0:20:60.18:0,60,845	0/0:8,0:8:24.08:0,24,349	0/0:17,0:17:51.16:0,51,724	0/0:19,0:19:57.13:0,57,773	0/0:14,0:13:39.13:0,39,571	1/1:0,27:27:66.22:921,66,0	0/0:23,0:23:69.02:0,69,897	0/0:30,0:30:90.29:0,90,1294	0/0:26,0:26:75.18:0,75,1005	0/0:31,0:31:93.08:0,93,1223	0/0:28,0:28:84.27:0,84,1203	0/0:14,0:14:42.14:0,42,614
chr10	81737121	.	A	AG	19479.48	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-13.737;DP=705;FS=4.639;HRun=2;HaplotypeScore=66.5273;InbreedingCoeff=0.9985;MQ=83.56;MQ0=0;MQRankSum=-3.492;QD=40.84;ReadPosRankSum=1.317;VQSLOD=5.1743;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,40:42:99:1684,117,0	0/0:12,0:12:36.11:0,36,446	0/0:36,0:34:89.76:0,90,1064	0/0:19,0:18:30.61:0,31,532	1/1:1,36:37:99:1512,105,0	0/0:22,0:21:48.15:0,48,595	0/0:26,0:26:75.24:0,75,930	1/1:0,21:21:63.19:884,63,0	0/0:28,0:28:66.21:0,66,818	1/1:1,25:27:81.23:1129,81,0	1/1:0,25:25:75.25:1079,75,0	0/0:34,0:34:81.25:0,81,1004	1/1:1,25:26:75.25:1080,75,0	1/1:1,28:29:81.27:1167,81,0	1/1:2,34:36:99:1425,99,0	1/1:0,24:24:69.23:994,69,0	1/1:0,27:27:78.26:1123,78,0	1/1:1,12:13:30.10:432,30,0	1/1:1,24:25:72.22:1014,72,0	1/1:0,32:32:96.32:1382,96,0	1/1:2,19:21:54.18:777,54,0	1/1:0,17:17:51.17:734,51,0	0/0:20,0:20:54.17:0,54,669	0/0:31,0:31:78.25:0,78,967	1/1:0,12:12:36.12:518,36,0	1/1:0,29:29:87.29:1252,87,0	1/1:2,26:28:72.24:1034,72,0	1/1:0,6:6:18.06:259,18,0
chr10	81737189	.	GAGAGAGAGAGAA	G	2841.06	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=6.632;DP=686;FS=6.217;HRun=0;HaplotypeScore=223.8152;InbreedingCoeff=0.8433;MQ=63.00;MQ0=22;MQRankSum=-0.534;QD=15.78;ReadPosRankSum=2.580;VQSLOD=2.0555;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:73.28:0,73,1957	0/0:8,0:8:20.89:0,21,483	0/0:47,0:24:26.56:0,27,213	0/0:73,0:29:0.57:0,1,119	0/0:28,0:28:62.73:0,63,1545	1/1:4,23:25:10.89:573,11,0	0/0:19,0:19:31.64:0,32,283	0/0:26,0:23:45.56:0,46,388	1/1:5,15:20:14.79:442,15,0	0/0:49,0:48:99:0,117,3312	0/0:24,0:23:28.96:0,29,797	1/1:7,20:27:18.06:575,18,0	1/1:17,0:17:23.54:244,24,0	0/1:19,0:19:39.39:49,0,39	0/0:26,0:26:57.03:0,57,1118	0/0:18,0:18:42.04:0,42,814	0/0:25,0:25:34.41:0,34,1487	0/0:12,0:11:24.02:0,24,505	0/0:13,0:12:26.74:0,27,473	0/0:23,0:22:45.53:0,46,1098	0/0:10,0:9:21.93:0,22,507	1/1:19,0:19:35.68:388,36,0	1/1:18,0:18:47.63:477,48,0	1/1:16,17:30:8.86:285,9,0	0/0:12,0:12:24.06:0,24,441	0/0:19,0:19:45.11:0,45,1049	0/0:20,0:20:45.63:0,46,908	0/0:19,0:18:41.32:0,41,1274
chr10	81737201	.	AAGAGAGAG	A	889.53	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=7.845;DP=658;FS=22.377;HRun=0;HaplotypeScore=177.9313;InbreedingCoeff=0.5618;MQ=56.72;MQ0=22;MQRankSum=-5.020;QD=4.76;ReadPosRankSum=-0.886;VQSLOD=1.2228;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:48.16:0,48,1024	0/0:10,0:10:20.55:0,21,325	./.	0/0:53,0:15:0:0,0,0	0/0:29,0:29:39.13:0,39,1182	1/1:27,0:25:16.87:247,17,0	1/1:11,8:19:5.98:84,6,0	0/0:22,0:19:1.82:0,2,5	0/1:19,0:19:28.88:196,0,29	0/0:42,0:44:84.26:0,84,1762	0/0:19,0:19:15.99:0,16,280	1/1:23,0:24:9.41:248,9,0	0/0:17,0:17:5.98:0,6,47	1/1:19,0:19:7.25:40,7,0	0/0:25,0:25:35.60:0,36,612	0/0:17,0:17:27.02:0,27,413	0/0:21,0:24:48.15:0,48,1133	0/0:12,0:11:13.60:0,14,258	0/0:18,0:16:20.65:0,21,332	0/0:22,0:22:22.89:0,23,490	0/0:9,0:8:11.38:0,11,214	0/1:27,0:27:33.14:47,0,33	0/1:24,0:23:18.76:53,0,19	1/1:27,0:24:8.74:138,9,0	0/0:14,0:14:15.39:0,15,237	0/0:20,0:20:35.96:0,36,589	0/0:27,0:27:39.12:0,39,626	0/0:20,0:20:33.54:0,34,659
chr10	81737609	.	TA	T	5786.01	PASS	AB=0.868;AC=40;AF=0.714;AN=56;BaseQRankSum=6.880;DP=507;FS=0.424;HRun=11;HaplotypeScore=70.9163;InbreedingCoeff=0.8035;MQ=75.69;MQ0=0;MQRankSum=-3.030;QD=14.61;ReadPosRankSum=1.446;VQSLOD=5.3187;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,9:11:23.96:197,24,0	0/0:16,0:16:42.08:0,42,436	0/1:9,2:11:27.96:28,0,124	0/0:12,0:12:3.22:0,3,108	1/1:2,22:24:50.87:418,51,0	0/0:12,1:13:8.45:0,8,295	0/0:19,0:19:51.13:0,51,543	1/1:3,0:26:43.66:125,44,0	0/0:12,0:12:21.02:0,21,208	1/1:5,17:22:47.90:389,48,0	1/1:1,17:19:22.54:370,23,0	0/1:14,2:16:4.16:4,0,370	1/1:3,0:12:18.31:53,18,0	1/1:6,0:24:38.69:112,39,0	1/1:3,20:24:55.97:449,56,0	1/1:1,8:9:20.97:172,21,0	1/1:2,13:16:19.42:280,19,0	1/1:3,9:12:26.96:222,27,0	1/1:0,18:18:50.93:419,51,0	1/1:3,27:32:78.96:627,79,0	1/1:2,13:15:35.94:296,36,0	1/1:1,0:20:26.24:76,26,0	0/0:26,0:27:33.44:0,33,520	0/0:12,0:12:24.06:0,24,256	1/1:1,18:20:52.98:425,53,0	1/1:4,18:22:50.42:418,50,0	1/1:6,18:24:21.93:387,22,0	1/1:5,14:19:38.94:320,39,0
chr10	81737664	.	GT	G	3051.86	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=6.343;DP=542;FS=4.497;HRun=10;HaplotypeScore=73.4578;InbreedingCoeff=0.9582;MQ=71.11;MQ0=0;MQRankSum=-1.294;QD=18.84;ReadPosRankSum=1.400;VQSLOD=4.5247;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.15:0,57,629	0/0:11,0:11:33.09:0,33,365	0/0:11,0:11:23.23:0,23,253	0/0:14,0:13:0.63:0,1,167	0/0:38,0:38:99:0,99,1079	1/1:2,17:19:17.81:382,18,0	0/0:17,0:18:47.96:0,48,511	1/1:7,17:24:20.65:355,21,0	1/1:1,15:16:38.99:339,39,0	0/0:29,0:29:75.16:0,75,811	0/0:22,0:23:65.97:0,66,684	1/1:1,11:12:26.99:234,27,0	1/1:2,14:16:47.99:416,48,0	1/1:0,23:23:59.99:520,60,0	0/0:29,0:29:78.19:0,78,846	0/0:16,0:17:47.96:0,48,512	0/0:15,0:15:36.08:0,36,387	0/0:10,0:11:29.91:0,30,312	0/0:16,0:16:45.12:0,45,497	0/0:36,0:36:93.07:0,93,994	0/0:7,0:7:21.06:0,21,232	1/1:3,16:19:37.48:367,37,0	1/1:1,20:21:53.98:469,54,0	1/1:4,8:12:20.97:182,21,0	0/0:25,0:25:69.17:0,69,749	0/0:28,0:28:74.87:0,75,807	0/0:22,0:21:28.45:0,28,517	0/0:10,0:10:27.07:0,27,299
chr10	81738463	.	A	AC	24077.05	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=6.666;DP=710;FS=11.305;HRun=0;HaplotypeScore=115.3599;InbreedingCoeff=0.9971;MQ=71.92;MQ0=2;MQRankSum=-4.611;QD=43.54;ReadPosRankSum=3.342;VQSLOD=3.3956;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:87.30:1389,87,0	0/0:10,0:10:30.10:0,30,419	0/0:18,0:16:42.04:0,42,539	0/0:11,0:10:15.55:0,16,320	1/1:0,19:18:57.19:911,57,0	1/1:0,27:26:66.23:1055,66,0	0/0:23,0:23:66.22:0,66,923	1/1:0,37:37:99:1655,105,0	1/1:0,23:23:66.23:1055,66,0	1/1:1,40:41:99:1818,117,0	1/1:1,17:17:48.16:767,48,0	1/1:1,35:36:90.31:1438,90,0	0/0:37,0:37:99:0,108,1492	0/0:26,0:26:75.25:0,75,1049	1/1:0,42:41:99:1725,108,0	1/1:0,30:30:81.28:1294,81,0	1/1:0,17:17:51.17:815,51,0	1/1:2,15:15:42.14:671,42,0	1/1:2,8:10:27.09:432,27,0	1/1:2,26:28:78.27:1247,78,0	1/1:0,27:27:78.27:1247,78,0	0/0:32,0:32:96.31:0,96,1326	1/1:0,29:29:87.30:1390,87,0	1/1:0,24:24:42.14:672,42,0	1/1:2,23:25:69.23:1093,69,0	1/1:1,39:40:99:1918,120,0	1/1:0,22:21:60.20:957,60,0	1/1:0,11:11:33.11:527,33,0
chr10	81738606	.	CA	C	13089.41	PASS	AB=0.571;AC=21;AF=0.375;AN=56;BaseQRankSum=11.622;DP=937;FS=38.625;HRun=3;HaplotypeScore=162.2406;InbreedingCoeff=0.3080;MQ=57.75;MQ0=4;MQRankSum=-1.255;QD=25.37;ReadPosRankSum=3.242;VQSLOD=1.8171;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,21:31:99:595,0,183	0/0:14,0:14:39.13:0,39,554	0/0:34,0:3:9.03:0,9,130	0/0:45,0:17:44.63:0,45,482	0/1:9,28:36:99:765,0,212	0/0:39,0:38:99:0,99,1361	0/0:22,0:20:57.15:0,57,790	0/0:40,0:35:99:0,99,1376	0/0:36,0:36:81.27:0,81,1162	0/1:9,26:32:82.61:868,0,83	0/1:7,19:26:99:495,0,196	0/0:33,0:33:87.18:0,87,1168	0/0:31,0:31:78.20:0,78,1060	0/0:37,0:37:99:0,99,1396	0/1:9,33:42:76.54:945,0,77	1/1:4,41:45:34.09:1324,34,0	1/1:2,24:26:26.01:769,26,0	1/1:4,20:23:60.19:742,60,0	0/1:8,27:32:99:768,0,249	0/1:6,39:45:99:1213,0,115	1/1:6,50:54:95.08:1618,95,0	0/0:29,0:29:78.22:0,78,1095	0/0:27,0:27:69.23:0,69,994	0/0:33,0:31:81.23:0,81,1130	1/1:2,24:26:22.99:738,23,0	0/1:14,37:50:99:1246,0,130	1/1:2,23:25:26.01:775,26,0	0/1:3,8:11:17.33:231,0,17
chr10	81738654	.	A	AACACAC	13571.20	PASS	AB=0.758;AC=40;AF=0.714;AN=56;BaseQRankSum=-4.468;DP=791;FS=10.052;HRun=0;HaplotypeScore=249.8155;InbreedingCoeff=0.5048;MQ=57.24;MQ0=7;MQRankSum=-3.606;QD=20.53;ReadPosRankSum=-4.012;VQSLOD=2.4290;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:28:29.88:358,30,0	0/0:15,0:15:36.10:0,36,709	0/0:33,0:26:2.18:0,2,86	0/1:39,0:27:3.11:3,0,68	1/1:25,4:30:23.24:350,23,0	1/1:12,0:31:33.21:421,33,0	0/1:20,0:20:14.39:14,0,450	1/1:35,0:33:40.47:617,40,0	0/1:13,0:39:66.15:274,0,66	1/1:16,11:29:72.06:1664,72,0	1/1:13,3:19:21.05:347,21,0	0/1:14,0:36:29.69:352,0,30	0/0:7,0:28:42.14:0,42,586	0/0:8,0:31:47.05:0,47,633	1/1:24,8:42:66.13:1301,66,0	0/1:25,11:38:5.12:1281,0,5	1/1:22,0:25:38.31:386,38,0	1/1:11,4:15:21.07:545,21,0	1/1:18,2:19:24:408,24,0	1/1:24,7:31:35.76:761,36,0	1/1:31,1:33:24.01:310,24,0	0/0:7,0:22:24.05:0,24,301	1/1:10,0:20:14.70:216,15,0	0/1:9,0:30:3.76:654,0,4	1/1:14,6:21:21.05:400,21,0	1/1:26,3:31:51.10:1008,51,0	1/1:18,3:27:48.01:1013,48,0	1/1:10,4:16:38.09:888,38,0
chr10	81739569	.	C	CAA	7236.73	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-12.483;DP=589;FS=0.358;HRun=11;HaplotypeScore=93.1135;InbreedingCoeff=0.8893;MQ=70.21;MQ0=1;MQRankSum=-1.202;QD=21.80;ReadPosRankSum=-3.795;VQSLOD=3.5764;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,14:21:34.58:417,35,0	0/0:14,0:14:26.96:0,27,256	0/0:13,0:11:15.46:0,15,120	0/1:21,0:18:8.24:8,0,73	1/1:8,15:27:44.09:559,44,0	0/0:3,0:32:71.35:0,71,311	0/0:20,0:20:48.01:0,48,451	0/0:31,0:32:65.79:0,66,619	0/0:2,0:21:49.32:0,49,214	1/1:8,20:35:54.06:970,54,0	1/1:4,14:22:43.40:499,43,0	0/0:1,0:19:43.91:0,44,191	0/0:2,0:19:35.67:0,36,154	0/0:2,0:17:30.04:0,30,130	1/1:5,14:21:35.61:481,36,0	1/1:3,13:20:28.89:483,29,0	1/1:2,15:19:35.59:468,36,0	1/1:3,3:7:5.51:52,6,0	1/1:5,16:24:3.42:620,3,0	1/1:6,16:25:56.08:706,56,0	1/1:3,7:11:15.05:217,15,0	0/0:2,0:20:49.39:0,49,213	0/0:1,0:29:76.85:0,77,334	0/0:2,0:20:51.77:0,52,223	1/1:2,11:14:18.06:261,18,0	1/1:10,17:30:54.01:675,54,0	1/1:3,25:28:47.97:647,48,0	1/1:1,4:5:12.04:174,12,0
chr10	81740133	.	G	GC	28193.80	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-1.161;DP=740;FS=3.210;HRun=0;HaplotypeScore=92.8741;InbreedingCoeff=0.9987;MQ=87.63;MQ0=0;MQRankSum=-8.444;QD=43.04;ReadPosRankSum=3.127;VQSLOD=5.2562;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,35:36:93.32:1486,93,0	0/0:16,0:16:48.16:0,48,671	0/0:19,0:19:54.18:0,54,750	0/0:30,0:30:72.57:0,73,967	1/1:2,27:29:72.18:1118,72,0	1/1:0,26:26:72.25:1150,72,0	0/0:20,0:20:60.19:0,60,823	1/1:0,43:43:99:1865,126,0	1/1:1,23:24:63.21:1007,63,0	1/1:1,38:39:99:1742,114,0	1/1:0,18:18:42.07:641,42,0	1/1:0,19:19:48.16:767,48,0	1/1:0,34:34:99:1581,99,0	1/1:0,19:19:51.17:814,51,0	1/1:1,35:36:99:1582,99,0	1/1:0,24:24:60.20:959,60,0	1/1:0,17:17:48.16:741,48,0	1/1:0,9:9:21.07:335,21,0	1/1:0,27:27:81.25:1248,81,0	1/1:0,39:39:99:1740,111,0	1/1:0,31:31:87.30:1390,87,0	1/1:2,25:27:63.21:1007,63,0	1/1:1,34:35:90.30:1438,90,0	1/1:0,21:21:63.21:1007,63,0	1/1:0,28:28:81.28:1294,81,0	1/1:0,39:39:99:1844,117,0	1/1:0,25:25:60.20:959,60,0	1/1:0,10:10:30.10:479,30,0
chr10	81740944	.	TCTCACA	T	3011.81	PASS	AB=1.000;AC=31;AF=0.596;AN=52;BaseQRankSum=0.406;DP=460;FS=0.000;HRun=0;HaplotypeScore=107.3560;InbreedingCoeff=-0.3363;MQ=48.23;MQ0=25;MQRankSum=2.346;QD=7.02;ReadPosRankSum=0.375;VQSLOD=2.0743;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:17:8.53:90,9,0	0/0:4,0:4:3.01:0,3,46	./.	./.	1/1:13,0:12:2.71:33,3,0	1/1:23,0:23:50.79:582,51,0	0/1:22,0:21:21.55:22,0,180	0/0:25,0:25:17.60:0,18,127	1/1:2,18:20:3.01:72,3,0	0/1:18,0:16:74.86:75,0,85	0/1:22,0:21:16.58:17,0,18	1/1:20,0:19:38.60:425,39,0	0/1:16,0:16:35.73:147,0,36	0/1:23,0:23:99:142,0,103	0/1:15,0:15:38.94:39,0,68	0/1:13,0:13:35.84:36,0,39	0/1:17,0:14:20.32:20,0,50	0/1:11,0:10:43.22:43,0,74	0/1:10,0:8:26.47:93,0,26	0/1:25,0:23:17.32:202,0,17	0/1:20,0:19:29.35:104,0,29	0/1:16,0:15:31.43:32,0,31	1/1:8,0:8:5.98:46,6,0	1/1:30,0:26:46.77:652,47,0	0/1:25,0:25:6.08:6,0,61	0/1:26,0:23:34.15:185,0,34	1/1:17,0:15:1.08:99,1,0	0/0:2,0:1:1.25:0,1,3
chr10	81740946	.	TCACA	T	1921.84	PASS	AB=0.959;AC=30;AF=0.556;AN=54;BaseQRankSum=-1.580;DP=481;FS=13.621;HRun=0;HaplotypeScore=100.2902;InbreedingCoeff=-0.0298;MQ=47.85;MQ0=28;MQRankSum=0.568;QD=4.69;ReadPosRankSum=-0.277;VQSLOD=1.0708;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:18:9.87:79,0,10	0/0:4,0:4:3.01:0,3,46	./.	0/0:4,0:1:2.99:0,3,23	1/1:13,0:12:2.87:33,3,0	1/1:23,0:23:26.79:361,27,0	0/1:23,0:22:36.37:36,0,72	0/0:25,0:25:2.87:0,3,34	1/1:20,0:20:3.01:41,3,0	0/1:18,0:16:11.44:51,0,11	0/1:22,0:21:0.01:0,0,0	1/1:19,0:19:25.94:257,26,0	0/1:17,0:17:9.95:109,0,10	0/1:24,0:24:4.11:158,0,4	0/1:15,0:15:1.63:57,0,2	1/1:13,0:13:3.01:33,3,0	1/1:17,0:14:3.01:32,3,0	1/1:11,0:10:3.88:39,4,0	0/1:11,0:9:31.32:74,0,31	0/1:25,0:23:36:95,0,36	0/1:21,0:20:13.52:43,0,14	0/0:17,0:16:2.99:0,3,24	0/1:2,8:10:0:0,0,0	1/1:33,0:29:33.48:468,33,0	1/1:28,0:28:2.95:33,3,0	0/1:27,0:24:64.45:64,0,108	0/0:17,0:15:5.94:0,6,27	0/0:2,0:1:1.25:0,1,3
chr10	81740973	.	CACAT	C	4535.49	PASS	AB=0.930;AC=41;AF=0.732;AN=56;BaseQRankSum=5.572;DP=554;FS=2.145;HRun=0;HaplotypeScore=94.1744;InbreedingCoeff=0.3722;MQ=53.04;MQ0=25;MQRankSum=-1.522;QD=10.01;ReadPosRankSum=4.151;VQSLOD=3.4585;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:17:24:281,24,0	0/1:4,0:4:7.67:8,0,63	0/0:33,0:12:22.14:0,22,250	0/1:37,0:19:0.18:0,0,422	1/1:2,15:16:2.88:51,3,0	0/1:22,0:22:68.15:238,0,68	0/0:19,0:18:6.97:0,7,214	0/0:33,0:33:13.36:0,13,598	0/1:20,0:20:1.94:2,0,145	1/1:17,1:18:47.07:396,47,0	0/1:1,26:27:0.01:0,0,0	0/1:19,0:19:65.06:190,0,65	1/1:16,0:16:29.75:328,30,0	1/1:23,0:23:41.46:496,41,0	1/1:2,12:14:8.46:121,8,0	1/1:14,0:14:2.99:57,3,0	1/1:18,0:17:3.01:56,3,0	1/1:7,0:6:14.93:142,15,0	1/1:15,0:9:4.69:235,5,0	1/1:23,0:22:12.59:359,13,0	1/1:19,0:19:38.57:341,39,0	1/1:5,11:16:8.99:75,9,0	0/0:16,0:16:23.80:0,24,198	0/1:29,0:25:99:233,0,103	1/1:29,0:29:3.01:56,3,0	1/1:26,0:26:41.50:539,42,0	1/1:18,0:17:40.23:287,40,0	1/1:3,0:2:5.97:45,6,0
chr10	81740975	.	CAT	C	4049.11	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=3.741;DP=559;FS=0.000;HRun=0;HaplotypeScore=85.5358;InbreedingCoeff=0.4675;MQ=53.35;MQ0=24;MQRankSum=-2.278;QD=9.29;ReadPosRankSum=0.472;VQSLOD=3.0009;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:18:23.99:215,24,0	0/1:4,0:4:7.67:8,0,41	0/0:33,0:12:22.14:0,22,250	0/1:37,0:19:0.22:0,0,376	1/1:17,0:16:2.87:33,3,0	0/1:23,0:23:99:100,0,123	0/0:20,0:19:21.43:0,21,190	0/0:35,0:35:19.48:0,19,665	0/0:19,0:19:20.81:0,21,168	1/1:19,0:19:50.45:425,50,0	0/1:27,0:27:0:0,0,0	0/1:19,0:19:76.22:107,0,76	1/1:16,0:16:29.84:269,30,0	1/1:23,0:23:44.61:404,45,0	1/1:14,0:14:8.18:63,8,0	1/1:0,15:15:2.98:32,3,0	1/1:2,16:17:3.01:34,3,0	1/1:7,0:6:14.92:119,15,0	1/1:8,7:9:15.49:242,15,0	1/1:22,0:21:38.98:373,39,0	1/1:19,0:19:38.99:445,39,0	1/1:14,0:14:8.99:75,9,0	0/0:16,0:16:23.93:0,24,198	0/1:29,0:26:32.48:32,0,145	1/1:0,29:29:3.01:32,3,0	1/1:27,1:28:75.70:619,76,0	1/1:18,0:17:41.76:353,42,0	1/1:3,0:2:6:67,6,0
chr10	81741128	.	G	GA	9840.22	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-12.093;DP=602;FS=9.766;HRun=8;HaplotypeScore=59.7289;InbreedingCoeff=0.9944;MQ=80.56;MQ0=0;MQRankSum=-4.014;QD=28.28;ReadPosRankSum=2.322;VQSLOD=5.0854;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,12:16:20.55:293,21,0	0/0:8,0:8:21.01:0,21,192	0/0:18,0:18:42.01:0,42,380	0/0:15,0:15:31.58:0,32,283	1/1:5,17:22:23.68:522,24,0	0/0:20,0:20:51.02:0,51,467	0/0:15,0:15:16.14:0,16,274	0/0:33,0:33:74.98:0,75,675	0/0:21,0:21:27.71:0,28,411	1/1:3,32:35:93.26:1062,93,0	1/1:3,27:30:78.15:864,78,0	0/0:18,0:18:48.02:0,48,439	0/0:22,0:22:54.02:0,54,494	0/0:22,0:22:54.02:0,54,494	1/1:2,16:18:39.12:450,39,0	1/1:1,19:20:53.96:623,54,0	1/1:2,25:28:78.06:880,78,0	1/1:1,6:7:15.04:173,15,0	1/1:2,17:20:50.92:527,51,0	1/1:5,18:23:51.15:589,51,0	1/1:2,14:16:36.11:415,36,0	0/0:28,0:28:81.04:0,81,741	0/0:18,0:18:51:0,51,461	0/0:16,0:16:45.02:0,45,412	1/1:2,34:36:99:1142,99,0	1/1:1,32:33:96.27:1098,96,0	1/1:5,24:29:69.21:796,69,0	1/1:3,12:15:36.09:404,36,0
chr10	81741578	.	A	AAAC	13259.25	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-14.761;DP=656;FS=11.543;HRun=0;HaplotypeScore=94.0376;InbreedingCoeff=0.9905;MQ=74.82;MQ0=2;MQRankSum=-3.300;QD=37.99;ReadPosRankSum=5.041;VQSLOD=5.2793;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,27:36:66.14:1320,66,0	0/0:11,0:11:30.10:0,30,442	0/0:39,0:30:57.56:0,58,749	0/0:45,0:37:71.50:0,72,972	1/1:9,20:30:54.19:1118,54,0	0/0:18,0:18:51.11:0,51,689	0/0:21,0:21:54.17:0,54,775	0/0:24,0:24:39.13:0,39,573	0/0:26,0:26:63.20:0,63,908	1/1:5,16:22:51.17:1013,51,0	1/1:5,16:22:36.04:699,36,0	0/0:24,0:24:66.15:0,66,923	0/0:24,0:24:51.17:0,51,750	0/0:21,0:21:45.09:0,45,619	1/1:2,17:19:42.14:870,42,0	1/1:2,15:17:36.12:745,36,0	1/1:8,25:34:60.21:1210,60,0	1/1:1,15:17:33.11:684,33,0	1/1:6,14:20:42.14:813,42,0	1/1:5,19:26:10:965,10,0	1/1:7,10:17:21.07:435,21,0	0/0:15,0:15:33.10:0,33,467	0/0:15,0:15:39.08:0,39,512	0/0:23,0:23:54.17:0,54,776	1/1:5,24:30:63.21:1158,63,0	1/1:3,21:23:60.18:1203,60,0	1/1:8,16:25:36.12:742,36,0	1/1:4,4:9:15.05:282,15,0
chr10	81741747	.	G	GTC	9690.34	PASS	AB=0.650;AC=35;AF=0.625;AN=56;BaseQRankSum=9.782;DP=391;FS=1.364;HRun=0;HaplotypeScore=75.9042;InbreedingCoeff=0.8865;MQ=65.68;MQ0=0;MQRankSum=-13.008;QD=39.88;ReadPosRankSum=1.390;VQSLOD=6.7557;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,24:30:63.22:1253,63,0	0/0:6,0:6:18.05:0,18,270	0/0:16,0:15:41.92:0,42,581	0/0:8,0:5:12.04:0,12,195	1/1:1,8:10:15.05:300,15,0	0/0:14,0:14:42.14:0,42,683	0/0:22,1:23:5.60:0,6,942	0/0:19,0:19:54.16:0,54,832	0/0:15,0:15:45.14:0,45,710	1/1:2,12:15:39.09:732,39,0	1/1:3,14:18:29.95:519,30,0	0/0:15,0:15:45.15:0,45,732	1/1:0,11:11:27.09:545,27,0	1/1:0,11:12:27.09:543,27,0	1/1:4,13:16:21:382,21,0	1/1:0,10:10:24.08:482,24,0	1/1:3,12:17:48.15:900,48,0	1/1:0,6:7:12.04:238,12,0	0/1:6,7:13:12.82:623,0,13	1/1:1,15:17:39.13:779,39,0	1/1:1,6:7:9.46:141,9,0	1/1:1,8:9:21:382,21,0	0/0:15,0:15:45.14:0,45,708	0/0:17,0:17:51.17:0,51,830	1/1:1,7:11:21.07:405,21,0	1/1:0,6:9:18.03:326,18,0	1/1:5,14:18:36.01:723,36,0	1/1:3,5:8:21.07:416,21,0
chr10	81741769	.	CAA	C	1442.73	PASS	AB=0.754;AC=23;AF=0.411;AN=56;BaseQRankSum=3.969;DP=466;FS=2.178;HRun=18;HaplotypeScore=93.8881;InbreedingCoeff=0.4153;MQ=52.56;MQ0=3;MQRankSum=-1.762;QD=5.68;ReadPosRankSum=3.522;VQSLOD=-0.4054;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,7:27:9.49:153,9,0	0/0:5,0:6:9.64:0,10,84	0/0:18,0:9:3.01:0,3,35	0/0:9,0:3:5.97:0,6,48	1/1:6,4:10:11.52:106,12,0	0/0:17,2:22:11.27:0,11,426	0/0:15,1:21:6.01:0,6,144	0/0:20,0:31:62.76:0,63,569	0/0:17,1:18:6.86:0,7,210	0/1:15,3:19:5.34:109,0,5	1/1:11,6:17:12.29:108,12,0	0/0:19,2:22:16.41:0,16,431	0/0:10,0:12:13.90:0,14,152	0/0:14,1:15:2.34:0,2,146	1/1:12,5:18:23.24:166,23,0	1/1:7,8:15:17.60:135,18,0	1/1:7,5:14:21.78:166,22,0	1/1:6,2:8:5.34:33,5,0	0/1:11,6:17:51.25:141,0,51	0/1:10,4:15:0.92:111,0,1	0/0:4,2:5:0.47:0,0,2	0/0:8,0:8:11.45:0,11,87	0/0:19,1:23:35.88:0,36,369	0/1:16,1:17:0.96:1,0,164	1/1:7,5:13:7.97:91,8,0	0/1:7,3:12:29.31:31,0,29	0/1:17,4:24:15.46:143,0,15	0/1:8,10:21:4.33:131,0,4
chr10	81744320	.	A	AG	11894.93	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-13.080;DP=634;FS=2.398;HRun=7;HaplotypeScore=60.6017;InbreedingCoeff=0.9977;MQ=80.68;MQ0=0;MQRankSum=-2.850;QD=28.19;ReadPosRankSum=3.856;VQSLOD=5.5239;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:17:39.12:471,39,0	0/0:16,0:16:48.08:0,48,463	0/0:25,0:25:57.02:0,57,526	0/0:13,0:11:19.25:0,19,178	1/1:2,35:37:93.29:1123,93,0	0/0:26,0:26:75.12:0,75,724	0/0:17,0:17:48.07:0,48,462	0/0:23,0:24:38.15:0,38,369	0/0:24,0:24:63.10:0,63,608	1/1:8,19:27:60.18:716,60,0	1/1:2,22:24:60.18:724,60,0	0/0:21,0:21:54.08:0,54,522	1/1:2,28:30:69.08:829,69,0	1/1:2,20:22:54.17:652,54,0	1/1:0,21:21:48.15:580,48,0	1/1:1,19:20:51.16:616,51,0	1/1:1,8:9:18.06:217,18,0	1/1:4,10:14:27.08:326,27,0	1/1:5,16:21:48.15:579,48,0	1/1:4,29:33:72.14:849,72,0	1/1:3,22:25:51.16:616,51,0	1/1:2,22:24:60.14:708,60,0	0/0:31,0:31:81.06:0,81,771	0/0:15,0:15:42.06:0,42,406	1/1:0,22:22:63.19:761,63,0	1/1:5,21:26:63.18:749,63,0	1/1:2,28:30:66.20:797,66,0	1/1:3,16:19:48.14:580,48,0
chr10	81745638	.	TCACACACACTCA	T	1846.08	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.995;DP=1059;FS=16.959;HRun=0;HaplotypeScore=386.5122;InbreedingCoeff=0.8950;MQ=50.34;MQ0=38;MQRankSum=0.767;QD=16.05;ReadPosRankSum=2.839;VQSLOD=0.5533;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:45:48.08:0,48,1231	0/0:11,0:11:24.07:0,24,570	0/0:57,0:7:8.84:0,9,56	0/0:51,0:8:3:0,3,26	0/0:30,0:30:26.98:0,27,553	0/0:27,0:26:48.15:0,48,1517	0/0:43,0:41:75.15:0,75,2068	0/0:51,0:44:50.91:0,51,521	0/0:52,0:52:90.18:0,90,2437	0/0:41,0:39:71.60:0,72,1201	0/0:20,0:18:21.05:0,21,550	0/0:49,0:49:93:0,93,2518	1/1:37,1:38:36.47:850,36,0	1/1:38,3:38:47.64:677,48,0	0/0:49,0:46:64.93:0,65,1788	0/0:43,0:43:66.14:0,66,1576	0/0:37,0:36:40.10:0,40,1236	0/0:30,0:29:45.72:0,46,896	0/0:17,0:10:15.05:0,15,377	0/0:26,0:26:28.24:0,28,672	0/0:109,0:100:96.02:0,96,2355	1/1:35,1:36:32.83:461,33,0	0/0:18,0:18:36.07:0,36,869	0/0:51,0:50:99:0,111,3271	0/0:27,0:26:24.08:0,24,672	0/0:32,0:29:57.08:0,57,1027	0/0:21,0:21:30.43:0,30,598	0/0:5,0:5:8.98:0,9,202
chr10	81745648	.	TCA	T	5527.48	PASS	AB=0.975;AC=31;AF=0.554;AN=56;BaseQRankSum=16.420;DP=1053;FS=2.144;HRun=0;HaplotypeScore=223.2980;InbreedingCoeff=0.7438;MQ=49.49;MQ0=50;MQRankSum=0.462;QD=8.90;ReadPosRankSum=3.880;VQSLOD=4.3724;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:47,3:49:55.36:419,55,0	0/0:11,0:11:33.11:0,33,548	0/0:47,0:6:8.20:0,8,107	0/0:43,0:6:3:0,3,51	1/1:25,2:27:25.89:186,26,0	0/0:29,0:28:66.70:0,67,1087	0/0:46,0:43:99:0,108,1781	0/0:51,0:38:96.24:0,96,1509	0/0:52,0:52:99:0,120,1914	1/1:45,2:43:95.86:861,96,0	1/1:18,1:17:20.92:162,21,0	0/0:49,0:49:99:0,132,2100	0/1:36,2:38:63.85:64,0,687	0/1:40,1:38:27.17:27,0,761	1/1:51,1:47:68.94:506,69,0	1/1:40,2:42:60.79:479,61,0	1/1:29,2:31:36.81:390,37,0	0/1:28,0:27:84.32:176,0,84	1/1:24,1:11:26.32:226,26,0	1/1:20,4:24:29.50:240,29,0	1/1:107,2:97:95.31:749,95,0	0/0:31,0:31:64.75:0,65,947	0/0:17,0:16:39.12:0,39,636	0/0:55,0:54:99:0,132,2171	1/1:23,2:24:23.71:187,24,0	1/1:33,0:30:73:606,73,0	1/1:23,0:23:27.94:182,28,0	1/1:6,0:6:12.76:69,13,0
chr10	81745651	.	C	CAT	898.85	PASS	AB=0.994;AC=17;AF=0.304;AN=56;BaseQRankSum=16.562;DP=1053;FS=4.081;HRun=0;HaplotypeScore=247.9677;InbreedingCoeff=-0.0520;MQ=49.44;MQ0=50;MQRankSum=2.533;QD=1.63;ReadPosRankSum=10.039;VQSLOD=0.9880;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:49,1:49:53.69:82,0,54	0/0:11,0:11:33.11:0,33,501	0/0:42,0:6:9.07:0,9,152	0/0:38,0:6:3.91:0,4,72	0/1:28,0:28:42.11:42,0,45	0/0:27,0:26:75.20:0,75,1076	0/0:46,0:42:99:0,120,1740	0/0:51,0:38:99:0,105,1465	0/0:51,0:51:99:0,141,1936	0/1:47,0:43:78.74:79,0,237	0/1:21,0:19:7.71:22,0,8	0/0:49,0:49:99:0,135,1969	0/0:38,0:38:99:0,102,1110	0/0:43,0:40:83.22:0,83,1052	0/1:52,0:47:27.50:88,0,28	1/1:42,0:42:6.28:125,6,0	0/1:31,1:31:8.95:136,0,9	0/1:28,0:27:26.04:26,0,151	0/1:27,0:12:32.62:33,0,71	0/1:24,0:24:1.39:41,0,1	0/1:107,3:98:54.81:111,0,55	0/0:32,0:32:69.16:0,69,979	0/0:17,0:16:41.92:0,42,588	0/0:57,0:56:99:0,153,2152	0/1:23,0:22:7.43:20,0,7	0/1:35,0:32:64.63:129,0,65	0/1:25,0:25:31.32:88,0,31	1/1:6,0:6:10.30:42,10,0
chr10	81745656	.	A	ACT	12815.94	PASS	AB=0.556;AC=29;AF=0.518;AN=56;BaseQRankSum=14.738;DP=1040;FS=1.306;HRun=0;HaplotypeScore=203.5496;InbreedingCoeff=0.8943;MQ=49.42;MQ0=52;MQRankSum=3.350;QD=23.39;ReadPosRankSum=8.191;VQSLOD=5.1369;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,40:49:61.09:1085,61,0	0/0:13,0:13:39.03:0,39,541	0/0:36,0:6:11.33:0,11,155	0/0:32,0:3:3.01:0,3,46	1/1:3,23:26:26.99:484,27,0	0/0:26,0:24:69.22:0,69,1026	0/0:46,0:41:99:0,114,1688	0/0:56,0:42:99:0,108,1493	0/0:47,0:47:99:0,129,1837	1/1:9,32:40:86.20:1423,86,0	1/1:5,16:20:20.97:384,21,0	0/0:50,0:50:99:0,141,2023	0/0:37,0:37:98.36:0,98,1124	0/0:44,0:40:65.32:0,65,1004	1/1:10,45:50:64.76:1271,65,0	1/1:4,37:42:71.65:1287,72,0	1/1:7,25:31:59.15:949,59,0	0/1:6,21:29:90.21:524,0,90	1/1:21,6:13:32.94:476,33,0	1/1:5,19:24:29.77:540,30,0	1/1:24,83:95:95.97:1764,96,0	0/0:32,0:32:65.71:0,66,959	0/0:16,0:15:39.12:0,39,574	0/0:57,0:56:99:0,144,2082	1/1:3,19:21:23.78:442,24,0	1/1:4,31:33:83.86:1344,84,0	1/1:3,22:26:36.10:623,36,0	1/1:0,5:5:12.04:220,12,0
chr10	81745661	.	C	CACAT	16061.98	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=11.030;DP=1049;FS=0.290;HRun=0;HaplotypeScore=223.7996;InbreedingCoeff=0.8734;MQ=49.15;MQ0=55;MQRankSum=-0.541;QD=28.68;ReadPosRankSum=6.297;VQSLOD=4.5403;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:50,0:50:66.22:1356,66,0	0/0:15,0:15:39.09:0,39,627	0/0:29,0:4:9.02:0,9,113	0/0:30,0:2:2.59:0,3,56	1/1:28,0:28:33.11:616,33,0	0/0:27,0:25:66.17:0,66,1151	0/0:45,0:40:99:0,108,1892	0/0:51,0:36:99:0,99,1627	0/0:48,0:48:99:0,126,2130	1/1:44,0:40:45.19:1612,45,0	1/1:21,1:20:21.07:456,21,0	0/0:50,0:50:99:0,129,2220	0/0:36,0:36:96.19:0,96,1472	0/0:45,0:41:84.19:0,84,1237	1/1:59,0:54:83.61:1612,84,0	1/1:44,0:45:78.27:1593,78,0	1/1:35,1:35:74.45:1285,74,0	0/1:30,0:29:98.38:665,0,98	1/1:26,1:11:30.94:547,31,0	1/1:26,0:26:38.82:741,39,0	1/1:103,1:91:99:2175,105,0	0/0:30,0:30:49.56:0,50,756	0/0:20,0:18:45.12:0,45,764	0/0:63,0:62:99:0,147,2637	1/1:24,0:23:5.15:539,5,0	1/1:34,1:34:93.30:1836,93,0	1/1:24,0:24:45.11:796,45,0	1/1:5,0:5:12.04:234,12,0
chr10	81745700	.	ACT	A	764.45	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.732;DP=987;FS=0.000;HRun=0;HaplotypeScore=195.1388;InbreedingCoeff=0.8383;MQ=53.78;MQ0=35;MQRankSum=-0.583;QD=7.88;ReadPosRankSum=2.718;VQSLOD=3.0301;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:66.15:0,66,1073	0/0:9,0:9:27.08:0,27,440	0/0:11,0:1:3.01:0,3,55	0/0:34,0:9:2.31:0,2,256	0/0:27,0:27:48.12:0,48,752	0/0:28,0:27:81.13:0,81,1323	0/0:50,0:47:99:0,132,1940	0/0:53,1:49:99:0,118,2197	0/0:46,0:46:99:0,117,1928	0/0:31,0:27:75.18:0,75,1243	0/0:23,0:23:47.45:0,47,703	0/0:41,0:42:99:0,112,1767	1/1:33,2:34:62.46:386,62,0	1/1:38,2:38:67.76:399,68,0	0/0:58,0:56:99:0,123,1980	0/0:40,0:38:96.97:0,97,1523	0/0:42,0:41:91.12:0,91,1762	0/0:30,0:30:4.20:0,4,892	0/0:28,0:20:55.87:0,56,788	0/0:33,0:31:72.17:0,72,1161	0/0:94,1:92:99:0,147,2455	1/1:21,1:21:23:120,23,0	0/0:22,0:20:57.07:0,57,861	0/0:53,1:53:99:0,141,2323	0/0:22,0:22:47.48:0,47,739	0/0:34,0:33:82.41:0,82,1413	0/0:28,0:28:60.17:0,60,991	0/0:9,0:9:27.09:0,27,482
chr10	81745704	.	TCA	T	1847.93	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.522;DP=1007;FS=0.000;HRun=0;HaplotypeScore=187.6496;InbreedingCoeff=0.9132;MQ=54.48;MQ0=34;MQRankSum=0.050;QD=19.05;ReadPosRankSum=3.053;VQSLOD=3.4164;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:66.14:0,66,1041	0/0:9,0:9:24.05:0,24,380	0/0:16,0:2:1.61:0,2,50	0/0:41,0:11:10.65:0,11,261	0/0:27,0:27:48.13:0,48,770	0/0:32,0:31:84.22:0,84,1320	0/0:50,0:47:99:0,105,1710	0/0:57,0:52:99:0,136,2185	0/0:47,0:47:99:0,114,1797	0/0:30,0:28:72.20:0,72,1142	0/0:25,0:25:42.14:0,42,679	0/0:42,0:42:99:0,102,1619	1/1:6,29:34:66.07:814,66,0	1/1:8,31:39:65.73:856,66,0	0/0:60,0:58:99:0,114,1811	0/0:38,0:35:91.52:0,92,1488	0/0:40,0:39:99:0,102,1635	0/0:31,0:31:60.72:0,61,988	0/0:28,0:19:34.24:0,34,654	0/0:34,0:32:69.18:0,69,1122	0/0:90,0:87:99:0,147,2375	1/1:5,17:21:23.97:319,24,0	0/0:22,0:20:45.15:0,45,768	0/0:53,0:53:99:0,132,2117	0/0:22,0:22:45.10:0,45,700	0/0:37,0:36:88.13:0,88,1382	0/0:27,0:27:60.14:0,60,970	0/0:9,0:9:27.09:0,27,442
chr10	81747727	.	A	AGTGT	1488.34	PASS	AB=0.937;AC=25;AF=0.500;AN=50;BaseQRankSum=-3.779;DP=595;FS=5.321;HRun=0;HaplotypeScore=124.6413;InbreedingCoeff=0.3991;MQ=71.13;MQ0=9;MQRankSum=0.561;QD=5.01;ReadPosRankSum=-2.957;VQSLOD=1.6584;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:29.54:366,30,0	0/1:8,0:8:13.19:13,0,82	./.	./.	0/1:22,0:23:35.68:43,0,36	1/1:16,0:16:6.02:95,6,0	0/0:20,0:23:2.73:0,3,26	./.	1/1:18,0:17:15.68:178,16,0	0/0:16,0:18:5.73:0,6,55	0/0:12,0:20:20.90:0,21,195	1/1:24,0:24:13.30:220,13,0	0/0:12,0:15:8.91:0,9,84	0/0:14,0:17:9.01:0,9,83	0/0:15,0:18:12.02:0,12,131	1/1:12,9:23:4.91:120,5,0	0/1:16,0:19:16.20:16,0,25	0/1:10,0:16:27.58:121,0,28	1/1:12,0:12:3:28,3,0	0/0:16,0:17:9.02:0,9,112	1/1:31,0:29:19.99:179,20,0	0/0:16,0:17:6.01:0,6,56	1/1:27,0:26:9.01:136,9,0	1/1:15,9:27:3.01:70,3,0	1/1:12,2:16:3.01:70,3,0	0/0:25,0:25:8.93:0,9,89	0/0:14,0:14:3:0,3,46	0/1:5,0:5:0:0,0,0
chr10	81748979	.	TATC	T	10551.46	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-9.316;DP=688;FS=10.497;HRun=0;HaplotypeScore=149.9528;InbreedingCoeff=0.9975;MQ=64.72;MQ0=2;MQRankSum=1.540;QD=29.39;ReadPosRankSum=1.852;VQSLOD=4.9190;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,19:27:51.17:723,51,0	0/0:8,0:8:24.08:0,24,484	0/0:28,0:24:17.64:0,18,650	0/0:16,0:15:21.04:0,21,354	1/1:5,28:33:80.94:1047,81,0	0/0:7,0:28:51.17:0,51,672	0/0:15,0:15:36.11:0,36,691	0/0:16,0:34:63.18:0,63,824	0/0:8,0:37:75.25:0,75,990	1/1:6,16:22:45.14:618,45,0	1/1:3,23:26:66.05:834,66,0	0/0:8,0:26:57.16:0,57,730	0/0:9,0:27:48.12:0,48,588	0/0:10,0:28:48.13:0,48,620	1/1:6,28:34:69.23:978,69,0	1/1:0,21:21:48.16:680,48,0	1/1:3,14:17:36.12:510,36,0	1/1:3,11:14:22.79:338,23,0	1/1:5,17:22:51.10:662,51,0	1/1:4,20:24:60.11:805,60,0	1/1:5,14:19:33.11:468,33,0	0/0:9,0:22:36.11:0,36,472	0/0:7,0:22:38.92:0,39,512	0/0:6,0:38:63.21:0,63,830	1/1:8,17:25:42.14:596,42,0	1/1:3,20:23:60.14:809,60,0	1/1:9,24:33:63.21:888,63,0	1/1:1,18:19:42.14:595,42,0
chr10	81749834	.	GT	G	14957.27	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=8.575;DP=701;FS=1.019;HRun=8;HaplotypeScore=101.8954;InbreedingCoeff=0.9696;MQ=83.17;MQ0=0;MQRankSum=-7.050;QD=23.93;ReadPosRankSum=5.157;VQSLOD=4.6601;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,36:39:93.15:898,93,0	0/0:12,0:12:36.11:0,36,435	0/0:25,0:25:56.33:0,56,644	0/0:16,0:16:32.12:0,32,367	1/1:0,28:28:84.14:811,84,0	1/1:6,20:26:54.08:521,54,0	0/0:23,0:23:60.18:0,60,725	1/1:7,17:24:51.06:488,51,0	1/1:2,28:30:81.13:782,81,0	1/1:4,36:40:99:1043,108,0	1/1:4,31:35:90.14:869,90,0	1/1:4,24:28:66.08:637,66,0	1/1:6,13:19:21.79:304,22,0	1/1:5,9:14:24.03:231,24,0	1/1:6,22:28:60.09:579,60,0	1/1:1,27:28:72.11:695,72,0	1/1:1,17:18:48.08:464,48,0	1/1:0,21:21:57.09:550,57,0	1/1:4,22:26:66.10:637,66,0	1/1:1,24:25:72.07:686,72,0	1/1:2,15:17:45.07:435,45,0	1/1:5,10:15:30.04:289,30,0	1/1:0,34:34:93.15:898,93,0	1/1:0,16:16:45.07:434,45,0	1/1:3,22:25:54.08:521,54,0	1/1:4,38:42:99:1100,114,0	1/1:3,40:43:99:1026,108,0	1/1:0,4:4:6.01:58,6,0
chr10	81751044	.	CG	C	2726.45	PASS	AB=0.962;AC=39;AF=0.696;AN=56;BaseQRankSum=2.581;DP=475;FS=3.376;HRun=11;HaplotypeScore=57.1774;InbreedingCoeff=0.7929;MQ=70.38;MQ0=1;MQRankSum=-2.109;QD=8.16;ReadPosRankSum=5.559;VQSLOD=1.9563;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,14:29:28.76:216,29,0	0/0:9,0:9:11.99:0,12,109	0/0:20,0:16:12.51:0,13,126	0/0:15,0:14:28.60:0,29,238	1/1:12,3:15:2.97:25,3,0	0/0:17,0:17:8.99:0,9,85	0/0:20,1:21:26.43:0,26,449	0/0:10,1:21:4.96:0,5,166	0/0:14,0:14:15:0,15,139	1/1:7,4:11:8.95:73,9,0	1/1:2,4:6:11.98:98,12,0	0/1:24,1:25:0.65:1,0,161	1/1:7,9:16:20.92:169,21,0	1/1:4,5:9:11.98:99,12,0	1/1:6,13:19:26.94:222,27,0	1/1:5,9:15:17.97:147,18,0	1/1:7,17:25:37.66:301,38,0	1/1:6,10:17:28.93:224,29,0	1/1:5,6:11:17.94:145,18,0	1/1:9,7:17:16.83:128,17,0	1/1:18,15:36:33.03:239,33,0	1/1:5,9:14:0.66:147,1,0	1/1:6,1:7:2.98:24,3,0	0/0:21,1:23:13.59:0,14,371	1/1:8,11:20:28.99:227,29,0	1/1:12,3:16:13.97:100,14,0	1/1:1,10:12:23.01:178,23,0	1/1:7,5:14:22.04:159,22,0
chr10	81752370	.	C	CCAAT	25374.36	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-1.880;DP=599;FS=24.262;HRun=0;HaplotypeScore=103.2145;InbreedingCoeff=0.9994;MQ=72.46;MQ0=0;MQRankSum=-6.643;QD=66.43;ReadPosRankSum=2.239;VQSLOD=4.5232;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,33:39:99:2609,102,0	0/0:14,0:14:39.12:0,39,698	0/0:22,0:22:63.17:0,63,1102	0/0:17,0:17:36.12:0,36,620	1/1:5,17:22:66.22:1482,66,0	0/0:16,0:16:39.13:0,39,728	0/0:25,0:25:66.19:0,66,1169	0/0:25,0:25:60.20:0,60,1091	0/0:25,0:25:75.25:0,75,1370	1/1:2,11:13:39.12:924,39,0	1/1:1,14:15:33.11:870,33,0	0/0:28,0:28:84.29:0,84,1568	1/1:8,22:30:81.26:2070,81,0	1/1:4,16:20:57.11:1389,57,0	1/1:2,30:32:87.30:2318,87,0	1/1:1,18:19:51.18:1359,51,0	1/1:2,23:25:60.21:1600,60,0	1/1:1,9:10:27.09:720,27,0	1/1:5,10:17:42.10:1002,42,0	1/1:4,9:13:33.11:807,33,0	1/1:4,16:20:39.13:990,39,0	1/1:3,23:26:66.23:1716,66,0	0/0:22,0:22:63.22:0,63,1176	0/0:23,0:23:63.22:0,63,1176	1/1:7,12:18:51.17:1279,51,0	1/1:5,23:27:75.19:1864,75,0	1/1:3,22:26:66.23:1741,66,0	1/1:0,8:8:24.08:633,24,0
chr10	81752462	.	C	CT	11040.43	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=2.229;DP=631;FS=1.872;HRun=8;HaplotypeScore=90.1264;InbreedingCoeff=0.9948;MQ=72.16;MQ0=0;MQRankSum=-1.079;QD=26.54;ReadPosRankSum=3.812;VQSLOD=5.1414;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:30:78.19:885,78,0	0/0:13,0:13:35.99:0,36,324	0/0:18,0:20:31.89:0,32,259	0/0:14,0:15:22.83:0,23,244	1/1:3,35:38:99:1122,102,0	0/0:31,0:31:81.03:0,81,741	0/0:12,0:12:30:0,30,270	0/0:36,0:36:93.04:0,93,851	0/0:21,0:21:57.03:0,57,522	1/1:2,16:18:45.12:509,45,0	1/1:1,20:21:60.18:691,60,0	0/0:27,0:27:75.03:0,75,686	1/1:36,0:36:88.89:586,89,0	1/1:15,0:15:41.44:271,41,0	1/1:0,19:19:48.14:554,48,0	1/1:1,20:21:48.14:554,48,0	1/1:2,19:21:60.09:663,60,0	1/1:2,18:20:33.24:568,33,0	1/1:5,13:18:39.12:449,39,0	1/1:6,19:25:32.63:601,33,0	1/1:0,28:28:75.22:865,75,0	1/1:24,0:24:59.74:392,60,0	0/0:19,0:19:53.95:0,54,473	0/0:21,0:21:60.03:0,60,549	1/1:4,24:27:66.20:762,66,0	1/1:2,21:23:63.17:714,63,0	1/1:6,18:24:63.19:726,63,0	1/1:4,3:7:12.02:128,12,0
chr10	81752469	.	T	TG	4166.52	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=17.228;DP=680;FS=1.644;HRun=0;HaplotypeScore=113.6610;InbreedingCoeff=0.1233;MQ=73.82;MQ0=0;MQRankSum=-0.585;QD=9.26;ReadPosRankSum=10.226;VQSLOD=2.9700;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:23.15:156,0,23	0/0:14,0:14:42.09:0,42,541	0/0:19,0:19:42.53:0,43,479	0/0:18,0:17:24.16:0,24,304	1/1:37,0:37:6.11:160,6,0	0/0:34,0:34:99:0,99,1276	0/0:12,0:12:36.10:0,36,472	0/0:34,0:34:96.31:0,96,1300	0/0:24,0:24:69.16:0,69,895	0/1:25,0:25:36.81:37,0,119	0/1:25,0:25:70.15:94,0,70	0/0:27,0:27:81.25:0,81,1094	1/1:0,36:36:90.30:1309,90,0	1/1:0,16:16:42.14:613,42,0	0/1:22,0:22:35.10:62,0,35	0/1:24,0:24:35.65:66,0,36	0/1:24,0:24:36.30:85,0,36	0/1:20,0:20:16.55:95,0,17	1/1:15,0:15:8.59:79,9,0	0/1:28,0:28:74.32:74,0,159	0/1:32,0:32:0.76:148,0,1	1/1:0,24:24:62.26:893,62,0	0/0:28,0:28:81.19:0,81,973	0/0:20,0:20:60.20:0,60,837	0/1:31,0:31:72.55:85,0,73	0/1:29,0:29:77.24:77,0,125	0/1:24,0:24:20.32:111,0,20	1/1:4,0:4:6.23:22,6,0
chr10	81756299	.	C	CT	6945.80	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-12.031;DP=592;FS=6.057;HRun=10;HaplotypeScore=65.8082;InbreedingCoeff=0.9880;MQ=71.10;MQ0=0;MQRankSum=-0.461;QD=21.05;ReadPosRankSum=1.016;VQSLOD=5.9283;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,32:38:62.57:871,63,0	0/0:10,0:10:23.96:0,24,197	0/0:15,0:12:23.45:0,23,175	0/0:13,0:13:29.93:0,30,240	1/1:7,24:33:50.19:693,50,0	0/0:25,0:25:59.92:0,60,493	0/0:20,0:20:41.92:0,42,344	0/0:25,0:25:44.93:0,45,369	0/0:18,0:18:47.94:0,48,394	1/1:2,20:23:65.75:653,66,0	1/1:2,18:20:45.02:447,45,0	0/0:19,0:19:47.94:0,48,393	0/0:3,0:24:26.47:0,26,77	0/0:0,0:23:36.45:0,36,105	1/1:6,14:20:30.08:320,30,0	1/1:0,21:22:47.52:511,48,0	1/1:8,16:24:14.45:359,14,0	1/1:2,9:12:28.46:274,28,0	1/1:8,15:23:28.52:450,29,0	1/1:5,18:23:29.49:519,29,0	1/1:2,14:16:33.08:352,33,0	0/0:6,0:20:26.46:0,26,76	0/0:25,0:25:59.92:0,60,493	0/0:24,0:25:73.89:0,74,588	1/1:3,13:17:29.91:302,30,0	1/1:8,19:28:56.96:580,57,0	1/1:5,22:27:29.49:519,29,0	1/1:1,3:4:9.02:96,9,0
chr10	81756907	.	A	AAAAACAAAAC	26079.84	PASS	AC=28;AF=0.519;AN=54;BaseQRankSum=-2.100;DP=846;FS=19.870;HRun=0;HaplotypeScore=228.1030;InbreedingCoeff=0.9937;MQ=69.87;MQ0=2;MQRankSum=-11.262;QD=54.00;ReadPosRankSum=-5.527;VQSLOD=2.4016;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:64:76.95:1065,77,0	0/0:14,0:14:27.09:0,27,782	0/0:24,0:19:20.36:0,20,286	0/0:36,0:30:19.46:0,19,384	1/1:19,27:48:69.24:2952,69,0	0/0:28,0:28:48.16:0,48,1241	0/0:33,0:33:51.16:0,51,1297	0/0:32,0:32:43.47:0,43,951	0/0:29,0:29:66.23:0,66,1854	1/1:31,22:55:82.20:3294,82,0	1/1:8,15:22:30.06:1103,30,0	0/0:26,0:26:54.17:0,54,1373	0/0:31,0:31:57.18:0,57,1483	0/0:25,0:25:51.17:0,51,1378	1/1:22,14:36:57.20:2690,57,0	1/1:10,10:22:33.11:1482,33,0	1/1:21,13:36:36.12:1548,36,0	1/1:12,7:19:12.04:599,12,0	1/1:14,9:25:45.13:1250,45,0	1/1:25,25:51:75.13:2666,75,0	1/1:13,1:14:27.07:774,27,0	0/0:25,0:25:45.13:0,45,1170	0/0:23,0:23:51.16:0,51,1411	0/0:34,0:34:75.25:0,75,1972	1/1:11,18:29:47.89:2233,48,0	1/1:8,8:16:36.12:1291,36,0	1/1:17,26:45:73.18:3134,73,0	./.
chr10	81762525	.	GC	G	1182.84	PASS	AB=0.680;AC=15;AF=0.268;AN=56;BaseQRankSum=14.486;DP=460;FS=5.209;HRun=4;HaplotypeScore=175.3103;InbreedingCoeff=-0.2070;MQ=74.93;MQ0=1;MQRankSum=-11.569;QD=5.53;ReadPosRankSum=7.374;VQSLOD=-0.4424;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:18,7:25:50.85:51,0,275	0/0:5,0:5:15.04:0,15,193	0/0:21,0:21:51.08:0,51,623	0/0:27,1:25:51.69:0,52,716	0/1:9,12:21:69.18:114,0,69	0/0:10,0:10:24.07:0,24,319	0/0:10,0:10:27.08:0,27,360	0/0:32,0:32:96.31:0,96,1313	0/0:20,0:20:57.19:0,57,798	0/1:6,7:13:36.25:130,0,36	1/1:4,12:16:6.25:165,6,0	0/0:21,0:21:60.20:0,60,840	0/0:21,0:21:63.20:0,63,865	0/0:15,0:15:39.13:0,39,546	0/1:9,9:18:99:118,0,104	0/1:5,7:12:50.30:80,0,50	0/0:15,1:16:11.08:0,11,197	0/1:1,2:3:14.15:29,0,14	0/1:13,5:18:83.86:84,0,140	0/1:12,6:18:72.70:73,0,136	0/1:10,3:13:16.50:17,0,53	0/0:17,0:17:48.15:0,48,651	0/0:16,0:16:45.10:0,45,588	0/0:14,0:14:42.14:0,42,588	0/1:4,10:14:18.33:133,0,18	0/1:7,10:17:98.22:151,0,98	0/1:4,11:15:40.22:145,0,40	0/1:7,4:11:37.48:55,0,37
chr10	81762530	.	TTCCCTCCCCTCTCCCATCCAG	T	16186.55	PASS	AB=0.801;AC=25;AF=0.446;AN=56;BaseQRankSum=15.624;DP=449;FS=3.901;HRun=0;HaplotypeScore=305.8516;InbreedingCoeff=0.6478;MQ=72.85;MQ0=1;MQRankSum=-15.058;QD=75.64;ReadPosRankSum=7.875;VQSLOD=3.1120;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,7:24:63.97:1008,0,64	0/0:5,0:5:15.05:0,15,1233	0/0:21,0:20:56.70:0,57,2844	0/0:30,0:27:36.68:0,37,3701	1/1:6,13:19:32.63:1725,33,0	0/0:7,0:7:21.07:0,21,1753	0/0:11,0:11:33.11:0,33,2836	0/0:34,0:34:99:0,102,5775	0/0:21,0:21:63.21:0,63,4888	1/1:5,7:12:16.37:1140,16,0	1/1:3,12:15:32.45:1840,32,0	0/0:20,0:20:60.21:0,60,4922	0/0:23,0:23:69.23:0,69,5901	0/0:16,0:16:48.16:0,48,3968	1/1:9,9:18:22.34:1489,22,0	1/1:4,7:11:6.48:954,6,0	0/1:12,1:13:27.70:163,0,28	1/1:1,2:3:7.58:327,8,0	0/1:11,5:16:15.84:816,0,16	0/1:11,6:17:11:891,0,11	0/1:9,3:12:0.59:388,0,1	0/0:17,0:17:48.15:0,48,3737	0/0:14,0:14:42.13:0,42,3774	0/0:16,0:16:48.16:0,48,4126	1/1:4,10:14:20.47:1479,20,0	1/1:7,10:17:29.78:1652,30,0	1/1:4,11:15:28.65:1628,29,0	1/1:4,4:8:14.29:686,14,0
chr10	81763182	.	GC	G	15254.10	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=14.569;DP=657;FS=0.915;HRun=1;HaplotypeScore=68.1909;InbreedingCoeff=0.9076;MQ=70.91;MQ0=0;MQRankSum=-0.304;QD=38.52;ReadPosRankSum=1.772;VQSLOD=5.5338;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,35:38:99:1554,114,0	0/0:15,0:15:45.13:0,45,694	0/1:11,0:11:2.42:2,0,153	0/1:8,0:8:2.08:2,0,167	1/1:4,25:29:87.27:1183,87,0	0/0:31,0:31:93.32:0,93,1485	0/0:16,0:16:48.16:0,48,765	0/0:25,0:25:69.22:0,69,1078	0/0:26,0:26:78.25:0,78,1220	1/1:2,28:30:90.26:1224,90,0	1/1:1,25:26:78.25:1067,78,0	0/0:19,0:19:57.19:0,57,908	0/0:31,0:31:93.32:0,93,1485	0/0:27,0:27:81.20:0,81,1198	1/1:5,30:35:99:1390,105,0	1/1:0,21:21:54.18:755,54,0	1/1:3,17:20:60.16:817,60,0	1/1:0,9:9:21.07:293,21,0	1/1:2,18:20:60.20:839,60,0	1/1:3,28:31:93.30:1284,93,0	1/1:4,21:25:72.21:969,72,0	0/0:30,0:30:87.28:0,87,1364	0/0:24,0:24:72.22:0,72,1113	0/0:17,0:17:51.17:0,51,815	1/1:1,27:28:84.28:1173,84,0	1/1:0,27:27:81.27:1128,81,0	1/1:2,30:32:96.31:1322,96,0	1/1:0,6:6:18.06:252,18,0
chr10	81763274	.	C	CG	25504.97	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-15.600;DP=800;FS=4.801;HRun=0;HaplotypeScore=69.4716;InbreedingCoeff=0.9998;MQ=82.61;MQ0=0;MQRankSum=-5.882;QD=45.06;ReadPosRankSum=4.279;VQSLOD=5.0603;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,50:52:99:2279,144,0	0/0:10,0:10:30.09:0,30,403	0/0:27,0:27:78.24:0,78,1053	0/0:22,0:22:46.07:0,46,768	1/1:1,32:33:90.31:1428,90,0	0/0:31,0:31:93.28:0,93,1280	0/0:13,0:13:39.13:0,39,545	0/0:36,0:36:99:0,102,1427	0/0:27,0:27:78.26:0,78,1089	1/1:1,32:33:96.30:1477,96,0	1/1:0,22:22:66.22:1049,66,0	0/0:25,0:25:72.24:0,72,1007	1/1:0,35:35:99:1579,99,0	1/1:2,34:36:99:1624,102,0	1/1:1,36:37:99:1677,105,0	1/1:1,33:34:99:1581,99,0	1/1:0,21:21:60.20:958,60,0	1/1:0,17:17:48.16:766,48,0	1/1:0,27:27:81.28:1281,81,0	1/1:0,43:43:99:1818,114,0	1/1:1,34:35:93.32:1484,93,0	1/1:1,24:25:66.23:1054,66,0	0/0:23,0:23:66.22:0,66,919	0/0:20,0:20:54.14:0,54,733	1/1:0,33:33:96.33:1533,96,0	1/1:0,37:37:99:1725,111,0	1/1:1,36:37:99:1762,111,0	1/1:0,9:9:27.09:431,27,0
chr10	81764386	.	AG	A	3933.98	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.727;DP=701;FS=0.387;HRun=2;HaplotypeScore=149.2828;InbreedingCoeff=0.9997;MQ=77.09;MQ0=0;MQRankSum=-1.204;QD=35.44;ReadPosRankSum=2.900;VQSLOD=3.1151;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.21:0,63,942	0/0:16,0:16:48.15:0,48,700	0/0:15,0:15:45.09:0,45,607	0/0:13,0:13:39.09:0,39,531	0/0:28,0:28:81.27:0,81,1212	0/0:29,0:29:87.29:0,87,1300	0/0:17,0:17:51.17:0,51,765	0/0:42,0:42:99:0,123,1843	0/0:24,0:24:72.24:0,72,1078	0/0:27,0:27:81.27:0,81,1197	0/0:27,0:27:81.26:0,81,1188	0/0:29,0:29:87.27:0,87,1281	1/1:1,33:34:96.31:1246,96,0	1/1:1,42:43:99:1519,117,0	0/0:42,0:42:99:0,126,1888	0/0:29,0:29:87.28:0,87,1283	0/0:14,0:14:42.13:0,42,606	0/0:13,0:13:39.13:0,39,583	0/0:22,0:22:66.22:0,66,983	0/0:18,0:18:48.12:0,48,694	0/0:15,0:15:45.15:0,45,675	1/1:0,34:34:90.29:1169,90,0	0/0:28,0:27:81.27:0,81,1213	0/0:11,0:11:33.11:0,33,495	0/0:27,0:27:81.27:0,81,1193	0/0:38,0:38:99:0,114,1709	0/0:34,0:34:99:0,102,1523	0/0:10,0:10:30.10:0,30,440
chr10	81766056	.	C	CT	14512.03	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=18.374;DP=711;FS=3.237;HRun=3;HaplotypeScore=107.3950;InbreedingCoeff=0.9996;MQ=78.59;MQ0=0;MQRankSum=-3.419;QD=37.21;ReadPosRankSum=4.597;VQSLOD=4.5044;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,37:38:99:1512,108,0	0/0:14,0:14:36.11:0,36,432	0/0:24,0:22:54.14:0,54,633	0/0:33,0:30:86.58:0,87,979	1/1:2,26:28:75.25:1050,75,0	0/0:36,0:36:99:0,102,1213	0/0:35,0:35:96.28:0,96,1140	0/0:29,0:29:66.18:0,66,771	0/0:17,0:17:48.15:0,48,576	1/1:4,27:31:81.21:1070,81,0	1/1:0,25:25:75.25:1050,75,0	0/0:20,0:20:60.18:0,60,720	0/0:24,0:24:69.21:0,69,827	0/0:24,0:24:72.22:0,72,862	1/1:1,27:28:75.25:1047,75,0	1/1:1,27:28:42.26:1014,42,0	1/1:1,22:23:63.21:882,63,0	1/1:3,11:14:30.99:419,31,0	1/1:1,17:18:48.16:655,48,0	1/1:1,29:30:87.16:1149,87,0	1/1:2,17:19:48.16:672,48,0	0/0:20,0:20:60.18:0,60,720	0/0:20,0:20:60.16:0,60,696	0/0:25,0:25:71.38:0,71,862	1/1:0,27:27:75.25:1050,75,0	1/1:2,33:35:99:1387,99,0	1/1:1,35:36:87.28:1218,87,0	1/1:0,10:10:24.08:336,24,0
chr10	81767325	.	A	AACACACACACATATACACAC	19915.73	PASS	AB=0.686;AC=32;AF=0.571;AN=56;BaseQRankSum=-1.050;DP=725;FS=8.543;HRun=0;HaplotypeScore=339.3392;InbreedingCoeff=0.5507;MQ=57.63;MQ0=6;MQRankSum=-5.544;QD=39.75;ReadPosRankSum=-3.212;VQSLOD=2.0642;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:25:4.49:256,0,4	0/0:10,0:11:33.10:0,33,1560	0/0:31,0:16:33:0,33,474	0/0:30,0:20:17.92:0,18,642	1/1:30,0:35:20.98:1764,21,0	0/1:11,0:29:14.26:14,0,330	0/0:15,0:15:36.11:0,36,1263	0/1:33,0:45:99:408,0,493	0/0:12,0:33:21.64:0,22,351	1/1:33,0:34:51.98:2554,52,0	1/1:32,0:34:11.20:1085,11,0	0/1:5,0:20:9.99:10,0,322	0/0:22,0:22:53.91:0,54,2405	0/0:24,0:25:69.22:0,69,3187	1/1:1,0:32:24:2040,24,0	1/1:29,0:33:45.54:2203,46,0	0/1:11,0:11:50.45:931,0,50	1/1:14,0:14:20.93:1030,21,0	1/1:14,0:15:21.80:902,22,0	1/1:7,0:40:3.01:258,3,0	1/1:17,0:18:12:318,12,0	0/0:21,0:21:45.61:0,46,2004	0/0:13,0:34:15.99:0,16,280	0/1:6,0:16:5.90:6,0,210	1/1:26,0:33:39.97:2757,40,0	1/1:5,0:29:43.96:1795,44,0	1/1:4,1:31:11.77:1061,12,0	1/1:0,0:3:6.02:524,6,0
chr10	81767462	.	AACACACAC	A	11650.71	PASS	AB=0.604;AC=27;AF=0.482;AN=56;BaseQRankSum=13.466;DP=777;FS=7.830;HRun=0;HaplotypeScore=206.8375;InbreedingCoeff=0.7741;MQ=53.07;MQ0=10;MQRankSum=-10.587;QD=30.42;ReadPosRankSum=-0.255;VQSLOD=3.6409;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,21:32:27.91:712,28,0	0/0:9,0:9:24.08:0,24,944	0/0:46,0:26:48.16:0,48,1422	0/0:39,0:28:49.57:0,50,1337	1/1:4,26:30:45.09:934,45,0	0/0:35,0:35:99:0,99,3738	0/0:17,0:19:42.13:0,42,1337	0/0:38,0:37:78.27:0,78,2667	0/0:29,0:31:51.18:0,51,1828	1/1:5,31:37:81.18:1921,81,0	1/1:3,19:22:33.07:679,33,0	0/0:25,0:26:69.24:0,69,2710	0/0:27,0:27:63.22:0,63,2442	0/0:12,0:26:54.19:0,54,1801	1/1:5,14:19:21.07:503,21,0	0/1:9,16:25:99:733,0,120	1/1:7,16:23:5.60:465,6,0	1/1:17,7:24:7.18:207,7,0	0/1:11,15:26:6.34:656,0,6	1/1:9,26:35:66.15:1460,66,0	1/1:8,16:24:9.03:203,9,0	0/0:11,0:30:59.45:0,59,1908	0/0:33,0:33:90.31:0,90,3397	0/0:34,0:35:69.24:0,69,2722	1/1:5,24:30:54.05:1302,54,0	0/1:5,16:21:6.31:954,0,6	1/1:6,18:23:24.08:573,24,0	1/1:3,8:11:15.05:349,15,0
chr10	81768111	.	TC	T	10452.92	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=17.238;DP=596;FS=4.080;HRun=3;HaplotypeScore=102.8279;InbreedingCoeff=0.9982;MQ=81.89;MQ0=1;MQRankSum=-3.010;QD=30.30;ReadPosRankSum=2.808;VQSLOD=4.4974;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,46:47:99:1301,105,0	0/0:9,0:9:27.09:0,27,382	0/0:17,0:16:41.40:0,41,603	0/0:21,0:22:42.51:0,43,541	1/1:0,18:18:30.09:372,30,0	0/0:12,0:12:36.12:0,36,518	0/0:28,0:28:81.26:0,81,1147	0/0:22,0:22:60.20:0,60,863	0/0:24,0:24:72.24:0,72,1037	1/1:1,21:22:63.18:766,63,0	1/1:1,10:11:24.07:298,24,0	0/0:28,0:28:84.28:0,84,1210	0/0:33,0:33:96.32:0,96,1375	0/0:20,0:20:57.18:0,57,801	1/1:1,33:34:96.30:1190,96,0	1/1:2,33:34:50.08:1073,50,0	1/1:3,22:25:57.12:671,57,0	1/1:2,17:19:45.12:543,45,0	1/1:1,12:13:36.11:446,36,0	1/1:0,14:14:33.10:409,33,0	1/1:1,38:39:90.28:1116,90,0	0/0:7,0:7:21.07:0,21,302	0/0:8,0:8:21.05:0,21,283	0/0:21,0:21:54.18:0,54,778	1/1:0,18:18:45.14:558,45,0	1/1:0,20:20:60.19:744,60,0	1/1:0,17:17:48.15:595,48,0	1/1:1,11:12:30.09:372,30,0
chr10	81768202	.	C	CT	2885.51	PASS	AC=36;AF=0.667;AN=54;BaseQRankSum=7.155;DP=300;FS=14.810;HRun=7;HaplotypeScore=86.2018;InbreedingCoeff=0.7917;MQ=70.51;MQ0=0;MQRankSum=-6.657;QD=14.01;ReadPosRankSum=0.830;VQSLOD=2.0231;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,6:15:23.67:227,24,0	0/0:2,0:2:3:0,3,29	0/0:8,0:6:12.02:0,12,116	0/0:14,0:9:0.25:0,0,66	1/1:11,11:22:31.48:290,31,0	0/0:2,0:2:3:0,3,29	0/0:5,0:5:6.01:0,6,58	0/0:32,0:31:69.09:0,69,662	0/0:8,0:8:6.01:0,6,58	1/1:12,5:17:21.03:208,21,0	1/1:2,6:8:18.89:187,19,0	0/0:8,0:8:12.01:0,12,116	1/1:3,7:10:21.06:253,21,0	1/1:5,3:8:15.03:169,15,0	1/1:4,3:7:9.02:94,9,0	1/1:9,5:14:18.91:185,19,0	1/1:7,7:14:18.10:158,18,0	1/1:6,4:10:15.84:139,16,0	1/1:5,4:9:9.02:99,9,0	1/1:5,5:10:16.81:178,17,0	1/1:3,4:7:11.99:128,12,0	1/1:0,3:3:9.03:108,9,0	0/0:8,0:8:21.03:0,21,203	./.	1/1:8,6:14:20.70:208,21,0	1/1:8,6:14:24.42:224,24,0	1/1:8,7:15:20.18:151,20,0	1/1:7,2:9:6.02:66,6,0
chr10	81768209	.	TATCATATATATATATA	T	7101.49	PASS	AB=1.000;AC=34;AF=0.630;AN=54;BaseQRankSum=6.301;DP=216;FS=21.807;HRun=0;HaplotypeScore=108.1021;InbreedingCoeff=0.6750;MQ=67.00;MQ0=2;MQRankSum=-6.961;QD=51.46;ReadPosRankSum=-0.122;VQSLOD=2.6783;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,6:13:33.07:912,33,0	0/0:1,0:1:3.01:0,3,71	0/0:11,0:5:12.04:0,12,266	0/0:20,0:7:14.99:0,15,225	1/1:12,6:18:42.12:1152,42,0	0/0:1,0:1:3.01:0,3,71	0/0:2,0:2:6.02:0,6,143	0/0:27,0:26:69.13:0,69,1750	0/0:3,0:3:5.93:0,6,88	1/1:7,0:7:21.04:226,21,0	1/1:6,1:7:21.02:351,21,0	0/0:4,0:4:12.04:0,12,286	0/1:7,0:7:38.16:225,0,38	1/1:5,0:5:3.20:200,3,0	1/1:3,0:3:9.03:112,9,0	1/1:6,1:7:21.05:357,21,0	1/1:10,2:12:20.51:418,21,0	1/1:6,1:7:17.97:291,18,0	1/1:4,0:4:9.02:100,9,0	1/1:6,2:8:21.07:475,21,0	1/1:4,0:4:11.99:128,12,0	0/1:3,0:3:14.62:114,0,15	0/0:8,0:8:21.06:0,21,453	./.	1/1:6,3:9:27.09:660,27,0	1/1:7,3:10:30.09:680,30,0	1/1:8,3:11:26.98:628,27,0	1/1:3,0:2:6.02:73,6,0
chr10	81768210	.	A	AT	1553.19	PASS	AB=1.000;AC=31;AF=0.574;AN=54;BaseQRankSum=4.717;DP=211;FS=25.420;HRun=7;HaplotypeScore=72.7592;InbreedingCoeff=0.6827;MQ=66.82;MQ0=3;MQRankSum=-6.355;QD=11.09;ReadPosRankSum=-1.734;VQSLOD=0.4861;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,6:12:12.76:104,13,0	0/0:1,0:1:3.01:0,3,39	0/0:12,0:5:12.03:0,12,145	0/1:18,0:7:4.80:5,0,69	1/1:8,9:17:15.33:193,15,0	0/0:1,0:1:3.01:0,3,39	0/0:2,0:2:6.02:0,6,78	0/0:26,0:25:66.21:0,66,851	0/0:3,0:3:6.02:0,6,73	1/1:1,5:6:15.04:192,15,0	1/1:1,6:7:9.71:85,10,0	0/0:4,0:4:12.04:0,12,155	0/0:7,0:7:9.43:0,9,53	0/0:4,0:4:5.23:0,5,28	1/1:0,3:3:9:96,9,0	1/1:3,3:6:11.33:137,11,0	1/1:7,4:11:8.36:118,8,0	1/1:4,3:7:7.74:82,8,0	1/1:2,2:4:6.02:74,6,0	1/1:3,5:8:7.30:50,7,0	1/1:2,2:4:4.55:30,5,0	0/0:3,0:3:5.15:0,5,26	0/0:7,0:7:18.06:0,18,233	./.	1/1:3,6:9:9.92:87,10,0	1/1:4,6:10:21.43:233,21,0	1/1:4,7:11:18.11:215,18,0	1/1:1,2:2:3.90:41,4,0
chr10	81768211	.	TCA	T	477.65	PASS	AB=0.986;AC=29;AF=0.537;AN=54;BaseQRankSum=8.075;DP=195;FS=44.060;HRun=0;HaplotypeScore=74.7689;InbreedingCoeff=0.5426;MQ=67.82;MQ0=3;MQRankSum=-7.281;QD=3.76;ReadPosRankSum=0.500;VQSLOD=0.1248;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:20.27:85,20,0	0/0:1,0:1:3:0,3,25	0/0:12,0:5:5.17:0,5,75	0/1:21,0:7:6.02:6,0,37	1/1:15,2:17:30.15:148,30,0	0/0:1,0:1:3:0,3,25	0/0:2,0:2:6:0,6,51	0/0:25,0:24:64.23:0,64,499	0/0:3,0:3:4.55:0,5,29	0/1:5,0:5:1.55:2,0,5	1/1:7,0:7:13.13:41,13,0	0/0:4,0:4:11.98:0,12,98	0/0:7,0:7:8:0,8,106	0/0:3,0:3:2.33:0,2,44	1/1:3,0:3:6.09:28,6,0	1/1:4,1:5:9.58:48,10,0	1/1:7,0:7:1.06:14,1,0	1/1:5,0:5:0.70:12,1,0	0/1:2,0:2:0.30:10,0,0	1/1:7,0:7:13.15:46,13,0	1/1:2,1:3:6.06:33,6,0	0/0:3,0:3:1.66:0,2,44	0/0:6,0:6:17.98:0,18,149	./.	1/1:9,0:9:16.92:63,17,0	1/1:9,0:9:7.54:50,8,0	1/1:11,0:11:14.30:58,14,0	1/1:3,0:2:1.72:4,2,0
chr10	81768212	.	CATATATATATATATAT	C	2871.46	PASS	AC=26;AF=0.765;AN=34;BaseQRankSum=5.092;DP=193;FS=35.321;HRun=0;HaplotypeScore=111.5816;InbreedingCoeff=0.5236;MQ=65.46;MQ0=3;MQRankSum=-3.496;QD=28.71;ReadPosRankSum=3.257;VQSLOD=0.5476;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:18.06:427,18,0	./.	./.	0/0:22,0:8:9.01:0,9,91	1/1:17,0:17:18.53:553,19,0	./.	./.	0/0:24,0:24:44.58:0,45,744	0/0:1,0:3:2.50:0,2,9	./.	1/1:7,0:7:3.01:95,3,0	0/0:4,0:4:3:0,3,25	1/1:5,2:7:6.02:268,6,0	1/1:2,1:3:6.02:174,6,0	./.	1/1:5,0:5:3.01:91,3,0	1/1:6,0:6:6.02:175,6,0	1/1:4,0:4:3.01:88,3,0	./.	1/1:7,0:7:6.02:184,6,0	./.	1/1:2,1:3:3.01:134,3,0	./.	./.	1/1:9,0:9:9.03:272,9,0	1/1:9,0:9:9.03:264,9,0	1/1:11,0:11:9.03:267,9,0	./.
chr10	81768222	.	T	TC	92.39	PASS	AB=0.895;AC=9;AF=0.214;AN=42;BaseQRankSum=0.007;DP=118;FS=0.000;HRun=0;HaplotypeScore=62.8007;InbreedingCoeff=0.0101;MQ=56.73;MQ0=6;MQRankSum=0.325;QD=1.23;ReadPosRankSum=0.282;VQSLOD=1.0874;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:7:3.37:3,0,13	0/0:1,0:1:3.01:0,3,40	0/0:13,0:2:3.46:0,3,24	0/1:32,0:7:3.05:3,0,65	0/1:7,0:7:0.18:0,0,20	1/1:0,1:1:3.01:47,3,0	0/0:1,0:1:3.01:0,3,41	0/1:20,0:20:6.15:6,0,576	0/0:2,0:2:2.50:0,2,9	./.	0/0:1,0:1:2.22:0,2,7	0/1:1,2:3:32.41:85,0,32	0/0:5,0:5:7.13:0,7,121	0/0:3,0:3:5.13:0,5,81	./.	0/1:1,1:2:1.78:40,0,2	0/1:2,0:2:1.94:9,0,2	0/0:1,0:1:2.22:0,2,7	./.	0/0:2,0:2:4.44:0,4,14	./.	0/0:2,0:2:2.03:0,2,9	./.	./.	0/0:3,0:3:6.66:0,7,21	0/0:3,0:3:5.33:0,5,16	0/0:3,0:3:6.66:0,7,21	./.
chr10	81768250	.	A	AT	1638.68	PASS	AB=0.800;AC=28;AF=0.583;AN=48;BaseQRankSum=4.754;DP=140;FS=38.843;HRun=6;HaplotypeScore=57.5881;InbreedingCoeff=0.5134;MQ=56.49;MQ0=7;MQRankSum=-4.522;QD=16.55;ReadPosRankSum=2.432;VQSLOD=1.4217;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:24.05:286,24,0	0/0:3,0:3:6.01:0,6,61	0/0:11,0:3:6.01:0,6,61	0/1:35,0:7:18.81:19,0,52	1/1:0,9:8:24.05:282,24,0	0/0:2,0:2:3:0,3,31	0/0:1,0:1:3.01:0,3,31	0/0:11,0:11:21.03:0,21,214	0/0:1,0:1:3.01:0,3,31	./.	1/1:0,1:1:3.01:38,3,0	0/0:4,0:4:12.03:0,12,121	1/1:1,3:4:9.03:113,9,0	1/1:0,3:3:9.03:113,9,0	./.	0/1:1,2:3:21.57:66,0,22	1/1:0,6:5:9:97,9,0	1/1:2,2:4:9.03:111,9,0	1/1:2,2:2:3.01:38,3,0	1/1:0,2:2:6.02:75,6,0	./.	1/1:0,2:2:6.02:75,6,0	0/0:2,0:2:3.01:0,3,31	0/0:3,0:3:6.01:0,6,61	1/1:0,6:6:15.05:188,15,0	1/1:0,5:4:12.04:151,12,0	1/1:0,4:4:12.04:151,12,0	./.
chr10	81768333	.	CT	C	818.20	PASS	AB=0.833;AC=27;AF=0.519;AN=52;BaseQRankSum=3.432;DP=136;FS=61.810;HRun=1;HaplotypeScore=25.5191;InbreedingCoeff=0.5897;MQ=51.38;MQ0=2;MQRankSum=-5.433;QD=24.06;ReadPosRankSum=1.596;VQSLOD=-0.2859;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:1:3.01:42,3,0	0/0:8,0:7:15.05:0,15,239	0/0:16,0:8:18.06:0,18,288	0/0:7,0:1:2.60:0,3,10	1/1:0,3:3:9.03:125,9,0	0/0:3,0:3:9.03:0,9,144	0/0:3,0:3:9.03:0,9,144	0/0:17,0:17:48.13:0,48,727	0/0:7,0:6:3.01:0,3,46	1/1:1,1:1:3.01:42,3,0	1/1:0,2:2:6.02:83,6,0	0/1:4,1:5:35.88:36,0,42	0/0:10,0:8:15.01:0,15,237	0/0:10,0:10:11.65:0,12,191	1/1:0,3:3:9.03:125,9,0	1/1:0,4:3:9.03:123,9,0	1/1:0,2:2:3.01:42,3,0	1/1:0,1:1:3.01:42,3,0	1/1:1,1:1:3.01:42,3,0	1/1:0,1:1:3.01:42,3,0	./.	0/0:5,0:5:12.04:0,12,192	0/0:5,0:5:12.04:0,12,190	0/0:10,0:9:24.08:0,24,370	1/1:0,2:2:6.02:84,6,0	./.	1/1:0,2:2:3.01:42,3,0	1/1:0,3:3:9.03:125,9,0
chr10	81768359	.	CTCCCCATCCT	C	822.91	PASS	AC=14;AF=0.389;AN=36;BaseQRankSum=4.550;DP=110;FS=26.114;HRun=0;HaplotypeScore=38.1604;InbreedingCoeff=0.5751;MQ=44.70;MQ0=12;MQRankSum=-3.965;QD=37.40;ReadPosRankSum=-0.305;VQSLOD=1.3785;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:4:9.03:0,9,328	./.	./.	1/1:3,1:4:6.02:137,6,0	0/0:2,0:2:3.01:0,3,132	0/0:2,0:2:3.01:0,3,74	0/0:13,0:9:21.07:0,21,779	0/0:7,0:6:3.01:0,3,82	1/1:1,1:1:3.01:97,3,0	1/1:1,2:2:6.02:138,6,0	0/0:6,0:6:11.79:0,12,513	0/0:10,0:8:10.29:0,10,486	0/0:10,0:10:12.04:0,12,514	1/1:2,1:3:3.01:97,3,0	1/1:2,2:3:3.01:97,3,0	./.	./.	./.	1/1:0,1:1:3.01:97,3,0	./.	0/0:6,0:5:9.03:0,9,397	0/0:3,0:3:3.01:0,3,140	0/0:8,0:7:18.06:0,18,791	./.	./.	./.	1/1:2,3:3:9.03:291,9,0
chr10	81768391	.	C	CA	290.19	PASS	AC=12;AF=0.375;AN=32;BaseQRankSum=4.155;DP=127;FS=32.009;HRun=0;HaplotypeScore=24.8541;InbreedingCoeff=0.5454;MQ=28.90;MQ0=32;MQRankSum=-1.648;QD=15.27;ReadPosRankSum=0.515;VQSLOD=2.0322;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:1,4:4:6.02:91,6,0	0/0:3,0:3:3.01:0,3,42	0/0:11,0:4:6.02:0,6,83	0/0:17,0:2:6.02:0,6,80	0/0:7,0:6:3.01:0,3,42	1/1:2,1:1:3.01:46,3,0	1/1:0,1:1:3.01:45,3,0	0/0:9,0:9:21.03:0,21,264	0/0:18,0:11:14.99:0,15,187	0/0:11,0:8:9.01:0,9,120	./.	1/1:0,2:1:3.01:46,3,0	./.	./.	./.	1/1:0,1:1:3.01:46,3,0	./.	0/0:7,0:3:6.02:0,6,84	0/0:6,0:3:3.01:0,3,42	0/0:9,0:7:15.05:0,15,209	./.	./.	./.	1/1:3,4:4:9.03:137,9,0
chr10	81769579	.	AT	A	1932.31	PASS	AB=0.704;AC=19;AF=0.528;AN=36;BaseQRankSum=3.627;DP=607;FS=6.017;HRun=6;HaplotypeScore=35.8513;InbreedingCoeff=0.6161;MQ=15.14;MQ0=336;MQRankSum=0.179;QD=9.07;ReadPosRankSum=1.274;VQSLOD=-0.1640;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:19,0:11:24.08:0,24,315	./.	./.	1/1:1,16:12:27.07:289,27,0	./.	0/0:18,0:1:3.01:0,3,39	./.	0/0:34,0:3:3.01:0,3,39	0/1:11,8:9:24.41:114,0,24	1/1:3,17:13:27.07:289,27,0	./.	0/0:22,0:5:11.96:0,12,124	0/0:17,0:3:3.01:0,3,39	1/1:6,3:1:3.01:32,3,0	1/1:12,5:4:12.03:129,12,0	1/1:34,1:1:3.01:32,3,0	./.	./.	1/1:12,24:25:66.10:693,66,0	./.	0/0:35,0:26:36.12:0,36,468	0/0:33,0:25:33.11:0,33,427	0/0:37,0:2:3.01:0,3,39	1/1:3,12:12:33.02:340,33,0	1/1:17,4:2:6.02:64,6,0	1/1:20,4:3:9.02:97,9,0	./.
chr10	81770047	.	GT	G	10728.35	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=17.098;DP=685;FS=0.291;HRun=6;HaplotypeScore=79.8300;InbreedingCoeff=0.9983;MQ=75.64;MQ0=0;MQRankSum=-6.526;QD=28.53;ReadPosRankSum=1.026;VQSLOD=5.3414;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:51.10:537,51,0	0/0:19,0:19:39.13:0,39,513	0/0:22,0:22:48.66:0,49,675	0/0:15,0:14:24.59:0,25,337	1/1:1,40:41:99:1103,105,0	0/0:28,0:28:81.26:0,81,1052	0/0:18,0:18:54.17:0,54,698	0/0:29,0:29:81.26:0,81,1053	0/0:27,0:27:72.21:0,72,920	1/1:2,29:31:87.19:923,87,0	1/1:0,22:22:63.12:663,63,0	0/0:23,0:23:63.20:0,63,829	0/0:27,0:27:75.22:0,75,950	0/0:19,0:19:51.10:0,51,649	1/1:2,31:33:90.22:967,90,0	1/1:3,30:33:84.21:902,84,0	1/1:2,13:15:33.08:355,33,0	1/1:1,7:8:21.05:226,21,0	1/1:3,14:17:42.06:432,42,0	1/1:1,31:32:90.11:929,90,0	1/1:0,8:8:21.05:226,21,0	0/0:24,0:24:69.12:0,69,867	0/0:34,0:34:84.27:0,84,1104	0/0:24,0:24:72.23:0,72,946	1/1:0,28:28:78.16:825,78,0	1/1:2,30:32:90.23:967,90,0	1/1:0,44:44:99:1418,132,0	1/1:0,12:12:23.40:257,23,0
chr10	81770367	.	CG	C	10516.33	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=16.767;DP=608;FS=3.569;HRun=1;HaplotypeScore=154.3798;InbreedingCoeff=0.9974;MQ=71.20;MQ0=0;MQRankSum=-12.292;QD=34.37;ReadPosRankSum=0.238;VQSLOD=4.4246;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:17:38.99:456,39,0	0/0:11,0:11:33.11:0,33,493	0/0:23,0:23:44.92:0,45,783	0/0:18,0:18:23.60:0,24,603	1/1:1,29:30:69.22:927,69,0	0/0:37,0:37:99:0,108,1588	0/0:16,0:16:48.02:0,48,665	0/0:26,0:25:72.13:0,72,968	0/0:16,0:16:45.13:0,45,650	1/1:6,27:33:99:1291,99,0	1/1:1,28:29:63.16:838,63,0	0/0:26,0:26:75.08:0,75,1089	0/0:34,0:34:90.30:0,90,1343	0/0:24,0:24:69.20:0,69,991	1/1:2,20:22:63.06:779,63,0	1/1:1,24:25:69.10:893,69,0	1/1:2,11:13:39.09:519,39,0	1/1:1,5:6:18.06:246,18,0	1/1:3,9:12:33.07:423,33,0	1/1:1,18:19:51.17:705,51,0	1/1:1,10:11:21.05:281,21,0	0/0:31,0:31:87.29:0,87,1298	0/0:23,0:23:69.17:0,69,1001	0/0:17,0:17:51.17:0,51,762	1/1:4,28:32:87.07:1073,87,0	1/1:1,26:26:78.25:1065,78,0	1/1:4,19:23:60.05:729,60,0	1/1:0,7:7:21.07:292,21,0
chr10	81770389	.	CATAAT	C	14650.23	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=18.335;DP=652;FS=1.766;HRun=0;HaplotypeScore=205.1535;InbreedingCoeff=0.9888;MQ=67.05;MQ0=0;MQRankSum=-18.556;QD=46.36;ReadPosRankSum=2.633;VQSLOD=4.6817;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,10:16:19.20:495,19,0	0/0:12,0:12:33.11:0,33,962	0/0:30,0:30:78.05:0,78,2041	0/0:15,0:15:35.79:0,36,931	1/1:7,27:34:57.07:1153,57,0	0/0:38,0:38:99:0,105,2975	0/0:18,0:18:51.18:0,51,1566	0/0:35,0:34:99:0,99,2765	0/0:20,0:20:57.18:0,57,1668	1/1:9,23:32:81.25:1645,81,0	1/1:4,25:29:60.21:1255,60,0	0/0:24,0:24:66.23:0,66,2026	0/0:34,0:34:93.30:0,93,2752	0/0:27,0:27:69.22:0,69,2046	1/1:5,17:22:54.16:1055,54,0	1/1:3,25:28:69.22:1392,69,0	1/1:3,12:15:33.11:691,33,0	1/1:2,4:6:9.03:189,9,0	1/1:5,13:18:39.13:780,39,0	1/1:4,17:21:57.15:1065,57,0	1/1:1,7:8:15.04:314,15,0	0/0:36,0:36:99:0,105,3075	0/0:26,0:26:72.25:0,72,2152	0/0:20,0:20:60.21:0,60,1843	1/1:1,21:22:57.20:1194,57,0	1/1:6,23:28:75.24:1491,75,0	1/1:3,20:23:63.22:1304,63,0	1/1:1,12:13:28.36:625,28,0
chr10	81770405	.	GA	G	2427.85	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-4.528;DP=656;FS=6.294;HRun=7;HaplotypeScore=193.3311;InbreedingCoeff=0.9961;MQ=70.43;MQ0=0;MQRankSum=7.038;QD=25.29;ReadPosRankSum=2.582;VQSLOD=1.4110;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:45.10:0,45,548	0/0:12,0:12:36.12:0,36,452	0/0:27,0:26:63.19:0,63,760	0/0:16,0:16:36:0,36,414	0/0:32,0:32:72.14:0,72,869	0/0:30,0:30:78.25:0,78,981	0/0:17,0:17:48.15:0,48,592	0/0:35,0:35:90.24:0,90,1093	0/0:18,0:18:51.16:0,51,642	0/0:30,0:30:81.26:0,81,1011	0/0:29,0:29:75.11:0,75,889	0/0:26,0:26:75.21:0,75,907	1/1:2,31:33:87.20:888,87,0	1/1:1,29:30:78.18:796,78,0	0/0:21,0:21:63.10:0,63,743	0/0:27,0:27:66.21:0,66,830	0/0:13,0:13:33.06:0,33,397	0/0:8,0:8:21.01:0,21,232	0/0:19,0:19:51.14:0,51,626	0/0:29,0:29:81.15:0,81,958	0/0:9,0:9:19.22:0,19,194	1/1:2,31:33:87.19:887,87,0	0/0:26,0:26:72.22:0,72,895	0/0:21,0:21:57.18:0,57,717	0/0:23,0:23:66.17:0,66,812	0/0:29,0:28:72.23:0,72,903	0/0:27,0:27:78.22:0,78,964	0/0:16,0:16:39.08:0,39,471
chr10	81770442	.	A	ATT	15122.46	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-1.497;DP=649;FS=13.405;HRun=5;HaplotypeScore=115.7463;InbreedingCoeff=0.9997;MQ=78.75;MQ0=1;MQRankSum=-10.559;QD=44.35;ReadPosRankSum=0.973;VQSLOD=3.3561;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:42.14:734,42,0	0/0:10,0:10:30.08:0,30,369	0/0:17,0:17:44.96:0,45,526	0/0:20,0:20:56.59:0,57,661	1/1:1,35:37:99:1713,105,0	0/0:27,0:27:78.25:0,78,993	0/0:22,0:22:60.19:0,60,763	0/0:41,0:40:99:0,114,1414	0/0:17,0:17:45.14:0,45,573	1/1:4,25:30:75.24:1284,75,0	1/1:2,21:23:63.22:1086,63,0	0/0:21,0:21:63.20:0,63,802	0/0:27,0:27:66.20:0,66,841	0/0:30,0:30:84.27:0,84,1070	1/1:2,20:22:54.18:942,54,0	1/1:3,21:24:57.20:995,57,0	1/1:1,15:16:36.08:597,36,0	1/1:1,9:10:27.09:472,27,0	1/1:3,16:21:54.16:913,54,0	1/1:2,28:30:84.29:1448,84,0	1/1:2,13:14:39.13:682,39,0	0/0:29,0:29:81.26:0,81,1032	0/0:24,0:24:69.22:0,69,879	0/0:22,0:22:57.16:0,57,712	1/1:2,16:18:48.16:838,48,0	1/1:4,23:27:69.24:1204,69,0	1/1:3,32:35:90.74:1532,91,0	1/1:0,15:15:39.13:682,39,0
chr10	81770645	.	GAC	G	2126.73	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.782;DP=585;FS=2.438;HRun=0;HaplotypeScore=86.6042;InbreedingCoeff=0.9935;MQ=76.57;MQ0=0;MQRankSum=-1.851;QD=30.82;ReadPosRankSum=2.365;VQSLOD=5.5356;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.33:0,96,1759	0/0:6,0:6:18.06:0,18,330	0/0:17,0:17:48.16:0,48,833	0/0:15,0:15:35.82:0,36,562	0/0:24,0:24:69.20:0,69,1195	0/0:22,0:22:66.21:0,66,1178	0/0:17,0:17:51.16:0,51,905	0/0:30,0:30:87.29:0,87,1568	0/0:15,0:15:42.13:0,42,740	0/0:25,0:25:72.23:0,72,1238	0/0:30,0:30:84.27:0,84,1477	0/0:15,0:15:45.15:0,45,814	1/1:0,20:20:47.83:661,48,0	1/1:2,21:23:54.18:773,54,0	0/0:18,0:18:54.18:0,54,961	0/0:21,0:21:60.21:0,60,1099	0/0:22,0:22:66.19:0,66,1175	0/0:12,0:12:33.11:0,33,587	0/0:20,0:20:57.18:0,57,1005	0/0:29,0:29:81.26:0,81,1431	0/0:20,0:20:60.18:0,60,1067	1/1:3,23:26:60.16:836,60,0	0/0:22,0:22:63.22:0,63,1140	0/0:19,1:20:17.23:0,17,1001	0/0:20,0:20:57.16:0,57,956	0/0:13,0:13:36.11:0,36,629	0/0:34,0:34:99:0,99,1747	0/0:16,0:16:48.16:0,48,878
chr10	81771511	.	AG	A	3233.06	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=13.181;DP=713;FS=0.413;HRun=2;HaplotypeScore=83.8142;InbreedingCoeff=0.9889;MQ=84.95;MQ0=0;MQRankSum=-3.993;QD=35.14;ReadPosRankSum=2.515;VQSLOD=4.0902;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,2158	0/0:10,0:10:30.10:0,30,449	0/0:22,0:22:66.22:0,66,988	0/0:21,0:21:57.16:0,57,804	0/0:26,0:26:78.24:0,78,1127	0/0:22,0:22:66.21:0,66,970	0/0:31,0:31:79.16:0,79,1291	0/0:24,0:24:69.23:0,69,1029	0/0:19,0:19:57.19:0,57,854	0/0:23,0:23:69.23:0,69,1034	0/0:14,0:14:39.13:0,39,583	0/0:32,0:32:96.30:0,96,1409	1/1:0,39:39:99:1469,114,0	1/1:1,25:26:72.23:935,72,0	0/0:35,0:35:99:0,105,1571	0/0:30,0:30:90.30:0,90,1348	0/0:22,0:22:63.15:0,63,877	0/0:19,0:19:54.18:0,54,809	0/0:19,0:19:54.18:0,54,809	0/0:30,0:30:87.28:0,87,1282	0/0:41,0:41:99:0,123,1798	1/1:0,27:27:75.24:974,75,0	0/0:22,0:22:66.22:0,66,986	0/0:38,0:38:99:0,114,1706	0/0:20,0:19:60.20:0,60,897	0/0:21,0:21:63.21:0,63,943	0/0:27,0:27:81.26:0,81,1179	0/0:4,0:4:12.04:0,12,180
chr10	81771844	.	C	CT	7453.35	PASS	AB=0.633;AC=27;AF=0.482;AN=56;BaseQRankSum=-15.444;DP=642;FS=0.000;HRun=10;HaplotypeScore=79.8166;InbreedingCoeff=0.5103;MQ=76.30;MQ0=0;MQRankSum=1.894;QD=18.87;ReadPosRankSum=-1.103;VQSLOD=5.0612;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,11:15:29.81:300,30,0	0/0:13,0:13:32.95:0,33,271	0/0:13,0:14:12.25:0,12,82	0/1:15,0:15:10.53:11,0,82	1/1:4,28:34:49.54:751,50,0	0/0:27,0:29:69.98:0,70,554	0/0:20,0:22:49:0,49,381	0/1:10,3:32:1.39:313,0,1	0/0:25,0:25:65.91:0,66,542	1/1:4,29:33:56.54:798,57,0	0/1:4,18:23:16.87:448,0,17	0/0:27,0:27:65.88:0,66,542	0/0:3,0:23:36.85:0,37,107	0/0:1,0:25:40.74:0,41,118	0/1:9,25:35:29.05:533,0,29	1/1:4,18:22:5.69:348,6,0	0/1:4,10:14:56.43:278,0,56	1/1:1,13:14:39.10:416,39,0	0/1:8,18:27:10.94:474,0,11	1/1:8,28:36:36.92:739,37,0	0/1:1,7:8:9.61:113,0,10	0/0:4,0:28:46.84:0,47,135	0/0:25,0:26:67.90:0,68,542	0/0:13,1:15:9.44:0,9,270	1/1:5,15:20:42.11:448,42,0	1/1:6,23:29:7.31:645,7,0	1/1:4,25:27:19.89:623,20,0	1/1:2,7:9:21.04:217,21,0
chr10	81772109	.	G	GGA	831.40	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-8.905;DP=502;FS=46.492;HRun=0;HaplotypeScore=117.0664;InbreedingCoeff=0.0147;MQ=71.39;MQ0=8;MQRankSum=1.786;QD=2.51;ReadPosRankSum=0.468;VQSLOD=0.5007;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:4:89,4,0	0/0:4,0:4:6.02:0,6,90	0/0:27,0:14:35.54:0,36,359	0/0:28,0:17:9.96:0,10,91	0/1:28,0:28:16.82:17,0,81	0/0:14,0:14:32.38:0,32,294	0/0:14,0:14:24.65:0,25,195	1/1:22,0:22:7.63:46,8,0	0/0:15,0:15:41.94:0,42,405	1/1:20,0:19:9.03:189,9,0	0/1:18,0:17:29.22:63,0,29	0/0:18,0:18:46.55:0,47,475	1/1:1,11:12:1.89:10,2,0	1/1:12,0:12:0.66:87,1,0	0/1:18,0:18:26.56:27,0,121	0/1:16,0:16:33.12:55,0,33	0/1:15,0:14:6.82:7,0,49	0/0:12,0:12:8.46:0,8,61	1/1:16,0:15:2.34:50,2,0	0/1:24,0:23:52.66:76,0,53	0/1:12,0:12:15.34:15,0,22	0/1:16,0:15:6.20:40,0,6	0/0:16,0:16:35.98:0,36,352	0/0:10,0:10:23.66:0,24,221	0/1:18,0:18:22.80:46,0,23	0/1:27,0:27:30.52:142,0,31	0/1:29,0:29:38.68:39,0,167	0/0:13,0:10:1.28:0,1,16
chr10	81772116	.	GGA	G	568.03	PASS	AB=0.920;AC=12;AF=0.214;AN=56;BaseQRankSum=2.206;DP=596;FS=1.608;HRun=0;HaplotypeScore=132.6019;InbreedingCoeff=0.0363;MQ=63.47;MQ0=18;MQRankSum=-0.613;QD=2.67;ReadPosRankSum=1.824;VQSLOD=2.4910;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,9:29:38.95:370,39,0	0/0:7,0:6:5.09:0,5,48	0/0:29,0:15:5.99:0,6,49	0/0:30,0:17:14.58:0,15,94	0/1:28,2:32:80.24:80,0,394	0/0:21,0:21:13.54:0,14,104	0/0:7,0:11:6:0,6,51	1/1:23,0:24:11.84:51,12,0	0/0:23,0:21:3:0,3,25	0/0:26,0:26:3.97:0,4,289	0/1:23,0:22:28.62:29,0,232	0/0:19,0:19:15.45:0,15,140	0/0:21,0:20:8.99:0,9,74	0/0:24,0:22:23.96:0,24,216	0/0:17,0:17:27.17:0,27,398	0/1:13,2:15:49.73:50,0,254	0/1:16,1:15:32.79:33,0,233	0/1:10,1:11:15.44:15,0,157	0/1:16,1:17:33.81:34,0,78	0/1:19,2:20:38.92:39,0,347	0/0:16,0:15:26.98:0,27,273	0/0:20,0:19:3.01:0,3,35	0/0:21,0:20:6.46:0,6,51	0/0:20,0:19:14.51:0,15,122	0/1:18,1:19:23.52:24,0,221	0/0:26,0:26:39.07:0,39,460	0/0:33,0:33:37.51:0,38,698	0/0:18,0:11:12:0,12,127
chr10	81772173	.	CTT	C	14573.28	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=7.295;DP=565;FS=6.811;HRun=4;HaplotypeScore=87.3215;InbreedingCoeff=0.9971;MQ=83.12;MQ0=2;MQRankSum=-0.784;QD=40.15;ReadPosRankSum=1.709;VQSLOD=3.9368;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:54.18:794,54,0	0/0:11,0:11:33.11:0,33,610	0/0:25,0:20:59.01:0,59,1015	0/0:22,0:19:14.81:0,15,501	1/1:1,38:39:99:1588,108,0	0/0:11,0:11:33.11:0,33,610	0/0:11,0:11:33.10:0,33,588	1/1:2,42:44:99:1795,126,0	0/0:11,0:11:33.11:0,33,617	1/1:0,24:24:72.23:1041,72,0	1/1:0,19:19:51.17:750,51,0	0/0:18,0:18:54.12:0,54,916	0/0:12,0:12:36.12:0,36,656	0/0:22,0:22:66.19:0,66,1183	1/1:0,20:20:54.18:794,54,0	1/1:1,14:15:39.13:574,39,0	1/1:0,17:17:44.74:661,45,0	1/1:0,14:14:30.10:441,30,0	1/1:1,24:25:72.23:1040,72,0	1/1:0,29:28:81.27:1192,81,0	1/1:0,13:13:39.13:573,39,0	0/0:20,0:20:57.19:0,57,1025	0/0:27,0:27:75.01:0,75,1277	0/0:11,0:11:33.11:0,33,609	1/1:0,19:18:45.15:662,45,0	1/1:0,22:22:66.21:952,66,0	1/1:0,33:33:93.31:1368,93,0	1/1:0,8:8:24.08:348,24,0
chr10	81772495	.	AC	A	13921.10	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=14.761;DP=650;FS=0.945;HRun=2;HaplotypeScore=100.8022;InbreedingCoeff=0.9993;MQ=79.82;MQ0=0;MQRankSum=-1.137;QD=34.98;ReadPosRankSum=3.254;VQSLOD=4.9755;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:42.14:545,42,0	0/0:10,0:10:30.10:0,30,448	0/0:20,0:21:53.88:0,54,696	0/0:10,0:10:23.67:0,24,315	1/1:0,36:36:99:1242,99,0	0/0:30,0:30:90.30:0,90,1335	0/0:26,0:26:78.22:0,78,1092	1/1:1,24:25:72.21:907,72,0	0/0:21,0:21:60.20:0,60,898	1/1:0,28:28:84.23:1048,84,0	1/1:0,28:28:78.25:1002,78,0	0/0:18,0:18:54.16:0,54,772	0/0:23,0:23:69.23:0,69,1027	0/0:23,0:23:69.19:0,69,989	1/1:0,34:34:93.30:1207,93,0	1/1:1,22:23:57.19:740,57,0	1/1:0,25:25:63.20:818,63,0	1/1:0,10:10:24.08:311,24,0	1/1:1,17:18:51.15:636,51,0	1/1:0,34:34:99:1238,99,0	1/1:0,21:21:57.19:740,57,0	0/0:27,0:27:78.15:0,78,1120	0/0:24,0:24:72.22:0,72,1029	0/0:19,0:19:57.19:0,57,854	1/1:0,35:35:96.31:1246,96,0	1/1:2,21:23:60.13:742,60,0	1/1:0,22:22:63.20:818,63,0	1/1:1,18:19:54.12:681,54,0
chr10	81773889	.	AT	A	12206.80	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=6.650;DP=590;FS=8.686;HRun=9;HaplotypeScore=117.2433;InbreedingCoeff=0.9962;MQ=73.26;MQ0=0;MQRankSum=-4.919;QD=23.12;ReadPosRankSum=5.627;VQSLOD=3.8795;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,41:44:99:1098,120,0	0/0:8,0:8:24.07:0,24,277	0/0:12,0:12:24.07:0,24,277	0/0:22,0:22:28.44:0,28,501	1/1:1,21:22:51.02:467,51,0	1/1:4,16:20:45.02:412,45,0	0/0:20,0:20:51.15:0,51,589	1/1:4,21:26:65:569,65,0	1/1:6,10:16:38.94:342,39,0	1/1:4,22:26:63.03:576,63,0	1/1:3,14:17:42.01:383,42,0	1/1:2,15:17:48.03:439,48,0	1/1:3,21:24:62.89:563,63,0	1/1:3,21:23:60.02:549,60,0	1/1:7,26:33:81.03:741,81,0	1/1:2,14:16:42.02:384,42,0	1/1:8,26:34:81.04:741,81,0	1/1:3,11:13:33.01:302,33,0	1/1:1,18:19:54.03:494,54,0	1/1:3,25:28:43.36:651,43,0	1/1:2,17:19:48.02:438,48,0	1/1:4,16:20:48.02:438,48,0	1/1:1,16:17:42.01:384,42,0	1/1:3,14:17:45:405,45,0	1/1:2,17:19:51.03:467,51,0	1/1:5,23:28:71.99:651,72,0	1/1:1,20:21:60.03:549,60,0	1/1:1,6:7:18:165,18,0
chr10	81773960	.	C	CTA	21490.93	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-0.670;DP=618;FS=2.375;HRun=0;HaplotypeScore=135.3626;InbreedingCoeff=0.9947;MQ=74.52;MQ0=0;MQRankSum=-7.803;QD=39.65;ReadPosRankSum=4.258;VQSLOD=6.6698;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,25:37:78.24:1297,78,0	0/0:10,0:10:30.10:0,30,394	0/0:24,0:24:57.18:0,57,733	0/0:15,0:15:26.40:0,26,339	1/1:10,15:25:51.17:855,51,0	1/1:4,16:20:48.16:808,48,0	0/0:27,0:27:60.18:0,60,773	1/1:1,17:18:51.17:875,51,0	1/1:3,17:20:54.18:925,54,0	1/1:8,24:32:81.28:1376,81,0	1/1:6,12:18:33.11:565,33,0	1/1:4,15:19:42.14:719,42,0	1/1:6,28:35:87.30:1483,87,0	1/1:10,18:27:54.17:896,54,0	1/1:4,30:34:90.31:1528,90,0	1/1:1,15:16:45.15:771,45,0	1/1:6,20:27:66.22:1088,66,0	1/1:9,9:17:33.11:541,33,0	1/1:4,17:21:54.18:903,54,0	1/1:12,15:27:54.18:898,54,0	1/1:3,11:14:33.11:563,33,0	1/1:3,13:16:42.13:690,42,0	1/1:3,15:18:42.14:719,42,0	1/1:4,18:22:54.18:925,54,0	1/1:4,11:15:30.10:514,30,0	1/1:5,15:20:45.15:771,45,0	1/1:9,25:35:93.29:1526,93,0	1/1:1,5:6:15.05:257,15,0
chr10	81774027	.	CACAA	C	24413.75	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=10.483;DP=601;FS=4.371;HRun=0;HaplotypeScore=175.7955;InbreedingCoeff=0.9972;MQ=77.74;MQ0=0;MQRankSum=-9.925;QD=46.24;ReadPosRankSum=4.866;VQSLOD=5.2714;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:72.19:1310,72,0	0/0:8,0:8:24.08:0,24,638	0/0:17,0:17:51.18:0,51,1263	0/0:22,0:22:60.17:0,60,1499	1/1:2,18:20:57.10:931,57,0	1/1:5,20:25:63.20:1151,63,0	0/0:26,0:26:72.25:0,72,1906	1/1:6,23:29:69.19:1182,69,0	1/1:1,19:20:54.17:976,54,0	1/1:3,25:28:75.23:1328,75,0	1/1:1,21:22:50.54:960,51,0	1/1:4,16:20:45.15:850,45,0	1/1:5,24:29:75.20:1342,75,0	1/1:2,25:27:72.25:1344,72,0	1/1:2,29:31:84.29:1578,84,0	1/1:1,10:11:27.09:512,27,0	1/1:2,22:24:54.18:1021,54,0	1/1:0,8:8:24.08:455,24,0	1/1:4,7:11:27.09:505,27,0	1/1:2,18:20:54.17:989,54,0	1/1:1,20:21:48.16:911,48,0	1/1:0,17:17:45.15:848,45,0	1/1:2,17:20:51.17:956,51,0	1/1:4,21:25:51.16:914,51,0	1/1:1,26:27:63.20:1151,63,0	1/1:0,24:24:72.25:1361,72,0	1/1:3,27:30:78.27:1446,78,0	1/1:1,9:10:21.07:395,21,0
chr10	81774486	.	C	CACGA	35470.31	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=9.221;DP=594;FS=3.523;HRun=0;HaplotypeScore=179.4122;InbreedingCoeff=0.9874;MQ=77.57;MQ0=0;MQRankSum=-13.047;QD=68.21;ReadPosRankSum=4.309;VQSLOD=6.3001;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,19:27:63.22:1672,63,0	0/0:6,0:6:18.06:0,18,360	0/0:26,0:26:74.96:0,75,1291	0/0:19,0:19:47.36:0,47,801	1/1:2,15:20:32.08:926,32,0	1/1:4,18:22:63.19:1604,63,0	0/0:23,0:23:69.24:0,69,1362	1/1:17,22:42:99:2519,102,0	1/1:1,26:28:81.28:2129,81,0	1/1:8,15:23:66.21:1615,66,0	1/1:5,12:17:45.15:1176,45,0	1/1:1,24:25:72.25:1907,72,0	1/1:5,12:17:48.16:1263,48,0	1/1:2,18:20:60.21:1571,60,0	1/1:4,23:31:84.29:2217,84,0	1/1:8,17:28:75.26:1958,75,0	1/1:7,10:17:45.15:1172,45,0	1/1:3,3:6:12.04:324,12,0	1/1:3,11:15:45.15:1171,45,0	1/1:3,14:18:45.15:1169,45,0	1/1:3,8:13:21.07:529,21,0	1/1:1,24:26:69.24:1838,69,0	1/1:1,14:15:45.15:1187,45,0	1/1:5,10:16:33.58:854,34,0	1/1:2,21:25:69.24:1833,69,0	1/1:6,29:35:99:2563,99,0	1/1:4,19:26:63.07:1630,63,0	1/1:0,8:8:24.08:643,24,0
chr10	81774985	.	A	AT	11188.90	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-7.573;DP=483;FS=17.569;HRun=8;HaplotypeScore=58.7879;InbreedingCoeff=0.9866;MQ=72.73;MQ0=1;MQRankSum=-1.567;QD=28.76;ReadPosRankSum=0.680;VQSLOD=3.3869;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:45.09:504,45,0	0/0:9,0:9:27.01:0,27,247	0/0:13,0:13:29.65:0,30,244	0/0:6,0:5:9:0,9,82	1/1:5,21:26:60.09:663,60,0	1/1:1,14:15:39.12:450,39,0	0/0:10,0:10:30:0,30,269	1/1:6,26:32:72.20:819,72,0	1/1:2,10:12:30.09:346,30,0	1/1:2,20:22:60.15:671,60,0	1/1:4,19:23:57.13:643,57,0	1/1:2,10:12:27.08:312,27,0	0/0:20,0:20:51:0,51,458	0/0:19,0:19:48.03:0,48,439	1/1:3,16:19:45.09:505,45,0	1/1:0,10:10:27.08:312,27,0	1/1:1,21:22:57.17:658,57,0	1/1:1,12:13:32.96:381,33,0	1/1:4,19:23:32.24:587,32,0	1/1:0,22:22:66.20:761,66,0	1/1:3,6:9:18.05:208,18,0	0/0:17,0:17:48.03:0,48,439	1/1:0,14:14:39.12:450,39,0	1/1:1,9:10:27.08:312,27,0	1/1:4,19:23:63.11:698,63,0	1/1:5,21:26:44.76:768,45,0	1/1:5,19:24:60.18:692,60,0	1/1:0,13:13:39.12:450,39,0
chr10	81775063	.	ATT	A	1497.73	PASS	AB=0.981;AC=26;AF=0.464;AN=56;BaseQRankSum=10.745;DP=237;FS=1.144;HRun=2;HaplotypeScore=94.1385;InbreedingCoeff=-0.5607;MQ=46.97;MQ0=1;MQRankSum=-6.107;QD=6.90;ReadPosRankSum=9.158;VQSLOD=-0.4351;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:8:12.34:12,0,170	0/0:3,0:3:9.03:0,9,139	0/0:6,0:5:5.91:0,6,55	0/0:6,1:3:3.48:0,3,40	0/1:12,0:12:42.55:146,0,43	0/1:8,0:8:16.45:61,0,16	0/0:4,0:4:8.70:0,9,116	0/1:14,0:14:77.84:78,0,195	0/1:9,0:9:25.85:26,0,88	0/1:15,1:16:95.44:95,0,135	0/1:17,0:17:46.15:154,0,46	0/1:2,0:2:6.26:6,0,19	0/1:9,0:9:27.92:28,0,96	0/1:10,0:10:37.99:38,0,94	0/1:7,0:7:24.73:25,0,93	1/1:4,0:4:11.24:73,11,0	0/1:5,0:5:42.52:43,0,62	0/1:8,0:8:11.25:11,0,183	0/1:10,0:10:66.47:66,0,116	1/1:9,0:9:19.77:101,20,0	0/1:4,0:4:1.21:1,0,93	0/1:4,0:4:16.60:17,0,19	0/1:5,0:5:24.40:59,0,24	0/1:2,0:2:6.30:6,0,20	0/1:12,2:14:99:109,0,123	0/1:11,0:11:68.78:96,0,69	0/1:15,3:18:26.33:276,0,26	0/1:9,1:10:10.40:127,0,10
chr10	81775614	.	AT	A	2202.12	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.693;DP=690;FS=14.055;HRun=7;HaplotypeScore=109.2010;InbreedingCoeff=0.9773;MQ=84.69;MQ0=0;MQRankSum=-3.353;QD=25.61;ReadPosRankSum=2.189;VQSLOD=2.4644;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.24:0,90,1090	0/0:11,0:11:30.07:0,30,362	0/0:27,0:27:66.20:0,66,805	0/0:17,0:19:9.22:0,9,410	0/0:33,0:33:90.29:0,90,1132	0/0:34,0:34:87.26:0,87,1080	0/0:20,0:20:54.16:0,54,666	0/0:38,0:38:99:0,105,1280	0/0:22,0:22:63.19:0,63,777	0/0:24,0:24:69.21:0,69,858	0/0:20,0:20:57.17:0,57,705	0/0:27,0:27:75.21:0,75,910	1/1:1,39:40:99:1059,105,0	1/1:3,16:19:48.10:490,48,0	0/0:31,0:31:90.29:0,90,1132	0/0:39,0:39:99:0,105,1309	0/0:22,0:22:57.18:0,57,717	0/0:11,0:11:33.09:0,33,401	0/0:24,0:24:63.20:0,63,793	0/0:23,0:23:63.20:0,63,793	0/0:19,0:19:54.16:0,54,666	1/1:0,27:27:78.18:796,78,0	0/0:21,0:21:57.18:0,57,717	0/0:23,0:23:63.19:0,63,781	0/0:24,0:24:63.19:0,63,781	0/0:20,0:20:57.17:0,57,706	0/0:34,0:34:93.27:0,93,1143	0/0:6,0:6:18.06:0,18,226
chr10	81776363	.	TTG	T	2534.28	PASS	AB=0.972;AC=12;AF=0.214;AN=56;BaseQRankSum=6.940;DP=677;FS=9.640;HRun=0;HaplotypeScore=195.7076;InbreedingCoeff=0.2841;MQ=57.25;MQ0=16;MQRankSum=-7.860;QD=10.30;ReadPosRankSum=-2.032;VQSLOD=2.2400;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:25:6.52:7,0,26	0/0:10,0:10:30.10:0,30,530	0/0:43,0:18:1.61:0,2,360	0/0:40,0:17:23.99:0,24,306	0/1:38,1:38:13.83:14,0,191	0/0:25,0:23:47.82:0,48,878	0/0:17,0:17:36.12:0,36,702	0/1:21,0:21:62.07:62,0,63	0/0:22,1:22:52.39:0,52,705	0/0:28,0:27:32.54:0,33,223	0/0:25,0:24:10.85:0,11,108	0/0:18,0:18:42.51:0,43,657	1/1:7,19:26:61.85:839,62,0	1/1:13,18:30:65.83:846,66,0	0/0:21,0:21:12.72:0,13,98	0/0:19,0:19:3.43:0,3,23	0/0:24,0:24:13.71:0,14,83	0/0:22,0:22:1.94:0,2,58	0/0:22,0:21:32.16:0,32,132	0/1:32,0:32:8.86:9,0,52	0/0:14,0:14:18.97:0,19,98	1/1:6,21:27:25.57:896,26,0	0/0:25,0:25:69.11:0,69,977	0/0:16,0:16:27.63:0,28,392	0/1:20,4:23:16.83:17,0,86	0/1:20,0:20:3.48:3,0,105	0/0:35,0:35:1.76:0,2,33	0/0:2,0:2:5.83:0,6,33
chr10	81776365	.	GGTTTT	G	16886.48	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=3.232;DP=674;FS=0.936;HRun=0;HaplotypeScore=177.0078;InbreedingCoeff=0.5762;MQ=57.92;MQ0=17;MQRankSum=-2.060;QD=30.98;ReadPosRankSum=5.917;VQSLOD=4.7099;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:24:24.08:366,24,0	0/0:10,0:10:30.10:0,30,756	0/0:43,0:18:5.41:0,5,316	0/0:44,0:17:22.01:0,22,283	1/1:2,33:37:96.92:1604,97,0	0/1:27,0:25:17.87:18,0,218	0/0:17,0:17:36.09:0,36,796	1/1:0,0:21:58.72:737,59,0	0/1:23,0:22:36.01:36,0,69	1/1:2,26:27:78.05:1284,78,0	1/1:3,22:24:62.71:962,63,0	0/1:17,0:17:10.26:10,0,236	1/1:27,0:27:47.90:418,48,0	1/1:31,0:30:44.45:443,44,0	1/1:0,18:19:41.81:849,42,0	1/1:0,19:19:42.14:903,42,0	1/1:3,19:22:48.11:972,48,0	1/1:0,20:21:48.12:920,48,0	1/1:3,16:22:56.92:919,57,0	1/1:1,30:32:96.19:1833,96,0	1/1:0,13:13:27.02:545,27,0	1/1:27,0:27:18.79:445,19,0	0/1:26,0:26:31.83:32,0,214	0/0:15,0:15:9.54:0,10,174	1/1:15,9:23:69.13:1126,69,0	1/1:1,18:19:56.84:969,57,0	1/1:0,35:36:69.05:1450,69,0	1/1:2,0:2:5.97:45,6,0
chr10	81776369	.	TTTTTTTTTTTTTG	T	2956.35	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=7.787;DP=680;FS=3.888;HRun=0;HaplotypeScore=323.5703;InbreedingCoeff=0.9809;MQ=57.28;MQ0=17;MQRankSum=-6.578;QD=33.59;ReadPosRankSum=4.397;VQSLOD=2.3870;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:24.08:0,24,484	0/0:10,0:10:30.10:0,30,1505	0/0:49,0:17:20.31:0,20,542	0/0:47,0:17:16.24:0,16,269	0/0:38,0:37:96.33:0,96,2271	0/0:27,0:25:72:0,72,1026	0/0:16,0:16:33.09:0,33,1463	0/0:21,0:21:51.17:0,51,1027	0/0:22,0:21:50.14:0,50,615	0/0:28,0:27:69.21:0,69,1714	0/0:24,0:24:57.02:0,57,1226	0/0:17,0:17:37.93:0,38,636	1/1:19,9:28:12.19:805,12,0	1/1:19,12:30:60.79:1223,61,0	0/0:19,0:19:42.14:0,42,1098	0/0:19,0:19:42.14:0,42,1088	0/0:22,0:22:45.15:0,45,1184	0/0:21,0:21:45.15:0,45,1120	0/0:23,0:22:57.19:0,57,1427	0/0:32,0:32:90.31:0,90,2303	0/0:13,0:13:24.08:0,24,648	1/1:22,7:29:52.64:1066,53,0	0/0:26,0:26:71.56:0,72,1103	0/0:13,0:13:26.04:0,26,350	0/0:22,0:21:48.16:0,48,1267	0/0:21,0:21:54.18:0,54,1236	0/0:36,0:36:69.24:0,69,1745	./.
chr10	81776372	.	T	TGG	821.68	PASS	AB=0.973;AC=8;AF=0.148;AN=54;BaseQRankSum=6.200;DP=687;FS=4.116;HRun=0;HaplotypeScore=213.7360;InbreedingCoeff=0.1121;MQ=60.12;MQ0=17;MQRankSum=-2.976;QD=3.91;ReadPosRankSum=-0.005;VQSLOD=2.8432;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:23.95:0,24,222	0/0:10,0:10:30.10:0,30,459	0/0:50,0:17:24.33:0,24,316	0/1:46,0:18:7.07:7,0,141	0/0:39,0:38:99:0,101,945	0/1:27,1:26:65.19:65,0,641	0/0:18,0:18:39.13:0,39,573	0/1:22,0:22:10.62:11,0,337	0/0:21,1:21:29.24:0,29,528	0/0:33,0:32:77.54:0,78,852	0/0:24,0:23:55.25:0,55,531	0/0:16,0:16:6.02:0,6,441	1/1:24,3:27:11.53:278,12,0	0/1:29,1:30:57.18:285,0,57	0/0:19,0:19:41.04:0,41,371	0/0:18,0:18:40.38:0,40,369	0/0:22,0:22:44.43:0,44,427	0/0:21,0:21:45.02:0,45,409	0/0:23,0:22:55.45:0,55,624	0/0:32,0:32:83.21:0,83,819	0/0:16,0:16:30.04:0,30,304	0/1:26,1:28:26.68:299,0,27	0/1:28,0:28:8.82:9,0,724	0/0:12,0:12:21.87:0,22,207	0/0:21,0:20:57.66:0,58,581	0/0:21,0:21:52.59:0,53,510	0/0:35,0:35:67.98:0,68,606	./.
chr10	81776375	.	TTTTTTTG	T	6424.47	PASS	AB=1.000;AC=20;AF=0.370;AN=54;BaseQRankSum=1.435;DP=673;FS=4.968;HRun=0;HaplotypeScore=242.9797;InbreedingCoeff=0.8266;MQ=60.03;MQ0=17;MQRankSum=-11.573;QD=23.19;ReadPosRankSum=1.816;VQSLOD=4.2917;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:22:19.29:106,19,0	0/0:10,0:10:24.08:0,24,754	0/0:49,0:16:28.66:0,29,310	0/1:44,0:16:12.18:12,0,121	0/0:39,0:38:43.65:0,44,465	1/1:16,13:27:60.01:1087,60,0	0/0:18,0:18:27.09:0,27,790	0/1:21,0:21:58.83:93,0,59	1/1:6,16:21:45.62:917,46,0	0/0:31,0:30:41.76:0,42,421	0/0:22,0:21:19.56:0,20,167	1/1:8,7:15:24.03:406,24,0	1/1:26,0:26:48.08:675,48,0	1/1:29,0:28:61.44:834,61,0	0/0:19,0:19:10.89:0,11,92	0/0:18,0:18:16.90:0,17,55	0/0:23,0:23:14.78:0,15,59	0/0:20,0:20:22.31:0,22,81	0/0:23,0:22:25.50:0,25,152	0/0:33,0:33:34.78:0,35,179	0/0:17,0:17:24.50:0,25,155	1/1:27,0:27:60.03:848,60,0	1/1:20,9:29:71.71:1160,72,0	1/1:9,3:12:17.96:287,18,0	0/0:18,0:17:28.47:0,28,151	0/0:21,0:21:24.34:0,24,196	0/0:35,0:35:12.62:0,13,107	./.
chr10	81776376	.	TTTTTTG	T	7381.11	PASS	AB=1.000;AC=37;AF=0.685;AN=54;BaseQRankSum=9.009;DP=670;FS=17.281;HRun=0;HaplotypeScore=224.7260;InbreedingCoeff=0.0555;MQ=59.99;MQ0=17;MQRankSum=-6.650;QD=12.41;ReadPosRankSum=9.280;VQSLOD=1.8120;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:22:21.05:237,21,0	0/0:10,0:10:24.03:0,24,654	0/0:49,0:16:9.70:0,10,301	0/1:44,0:16:15.42:15,0,120	0/1:39,0:38:99:130,0,228	1/1:28,1:27:60.08:877,60,0	0/0:16,0:16:27.01:0,27,669	0/1:21,0:21:16.77:288,0,17	1/1:21,1:21:45.62:702,46,0	0/1:32,0:31:37.77:38,0,296	0/1:22,0:21:68.75:69,0,91	1/1:13,2:15:24.08:378,24,0	1/1:26,0:26:50.60:723,51,0	1/1:29,0:28:63.81:875,64,0	0/1:20,0:20:37.65:95,0,38	1/1:18,0:18:25.43:103,25,0	1/1:23,0:23:15.12:115,15,0	1/1:20,0:20:17.59:77,18,0	0/1:22,0:21:30.22:31,0,30	0/1:33,0:33:4.86:176,0,5	0/1:16,0:16:28.86:29,0,68	1/1:26,1:27:60.02:882,60,0	1/1:24,4:28:74.32:1013,74,0	1/1:12,0:12:17.96:216,18,0	0/1:18,0:17:32.63:50,0,33	0/1:21,0:21:72.32:72,0,90	1/1:35,0:35:13.69:189,14,0	./.
chr10	81776377	.	TTTTTG	T	9421.88	PASS	AB=1.000;AC=39;AF=0.722;AN=54;BaseQRankSum=9.729;DP=671;FS=16.771;HRun=0;HaplotypeScore=206.5276;InbreedingCoeff=0.1877;MQ=60.04;MQ0=17;MQRankSum=-8.160;QD=15.76;ReadPosRankSum=9.891;VQSLOD=2.2240;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:22:20.21:133,20,0	0/0:9,0:9:23.90:0,24,556	0/0:49,0:16:19.48:0,19,321	0/1:43,0:15:13.16:13,0,110	0/1:42,0:41:99:376,0,142	1/1:27,1:26:60.18:788,60,0	0/0:15,0:15:26.98:0,27,553	0/1:22,0:22:41.32:125,0,41	1/1:22,0:21:45.62:604,46,0	0/1:33,0:32:99:203,0,221	0/1:22,0:21:36.42:258,0,36	1/1:13,1:14:24.08:336,24,0	1/1:13,13:26:51.52:784,52,0	1/1:15,14:28:64.36:916,64,0	0/1:20,0:20:17.82:247,0,18	1/1:18,0:18:41.17:317,41,0	1/1:23,0:23:23.72:321,24,0	1/1:20,0:20:40.22:272,40,0	1/1:22,0:21:16.57:150,17,0	1/1:35,0:35:5.83:555,6,0	0/1:15,0:15:47.22:99,0,47	1/1:11,16:27:59.99:909,60,0	1/1:28,0:28:73.57:854,74,0	1/1:12,0:12:17.96:192,18,0	0/1:18,0:17:0:218,0,0	0/1:22,0:22:81.37:225,0,81	1/1:34,0:34:28.06:523,28,0	./.
chr10	81776472	.	GA	G	2958.95	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.715;DP=627;FS=1.811;HRun=7;HaplotypeScore=66.2081;InbreedingCoeff=0.9022;MQ=70.13;MQ0=0;MQRankSum=2.325;QD=24.87;ReadPosRankSum=2.167;VQSLOD=4.3757;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.22:0,69,867	0/0:5,0:5:15.05:0,15,189	0/0:11,1:12:0.22:0,0,299	0/0:12,0:12:24.03:0,24,265	0/0:34,0:34:81.19:0,81,961	1/1:1,32:33:81.18:826,81,0	0/0:11,0:11:30.10:0,30,377	0/0:32,0:32:87.26:0,87,1063	1/1:1,14:15:42.10:428,42,0	0/0:30,0:30:78.18:0,78,962	0/0:26,0:26:66.21:0,66,823	1/1:0,17:17:51.12:520,51,0	0/0:29,0:29:78.25:0,78,981	0/0:17,0:17:48.15:0,48,602	0/0:33,0:33:93.29:0,93,1159	0/0:21,0:21:57.15:0,57,680	0/0:26,0:26:69.18:0,69,850	0/0:15,0:15:42.13:0,42,527	0/0:20,0:20:54.17:0,54,679	0/0:32,0:32:75.23:0,75,933	0/0:18,0:18:48.15:0,48,604	0/0:24,0:24:69.22:0,69,868	1/1:2,23:25:65.91:654,66,0	1/1:1,28:29:69.16:704,69,0	0/0:26,0:26:72.16:0,72,884	0/0:27,0:27:72.21:0,72,883	0/0:31,0:31:84.26:0,84,1043	0/0:1,0:1:3.01:0,3,38
chr10	81776479	.	AC	A	468.09	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.903;DP=639;FS=1.791;HRun=1;HaplotypeScore=75.3553;InbreedingCoeff=0.9328;MQ=73.79;MQ0=0;MQRankSum=0.943;QD=3.84;ReadPosRankSum=4.101;VQSLOD=0.6704;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.21:0,75,1055	0/0:6,0:6:18.05:0,18,241	0/0:17,1:18:31.69:0,32,515	0/0:11,1:12:25.56:0,26,297	0/0:30,0:30:84.08:0,84,1141	1/1:34,0:34:19.34:153,19,0	0/0:12,0:12:36.09:0,36,487	0/0:34,0:34:99:0,99,1356	1/1:15,1:16:16.56:91,17,0	0/0:29,0:29:87.20:0,87,1193	0/0:27,0:27:78:0,78,1033	1/1:18,0:18:20.44:90,20,0	0/0:29,0:29:87.21:0,87,1206	0/0:17,0:17:51.15:0,51,721	0/0:35,0:35:99:0,105,1448	0/0:19,0:19:54.16:0,54,769	0/0:28,0:28:81.15:0,81,1087	0/0:17,0:17:51.06:0,51,676	0/0:18,0:18:54.18:0,54,789	0/0:28,0:28:81.23:0,81,1141	0/0:20,0:20:60.10:0,60,777	0/0:24,0:24:69.22:0,69,987	1/1:25,1:26:7.07:136,7,0	1/1:28,0:28:52.03:166,52,0	0/0:26,0:26:78.15:0,78,1061	0/0:28,0:28:81.23:0,81,1115	0/0:32,0:32:96.17:0,96,1291	0/0:1,0:1:3.01:0,3,44
chr10	81776889	.	TATATC	T	16851.01	PASS	AB=0.524;AC=31;AF=0.554;AN=56;BaseQRankSum=1.124;DP=590;FS=1.465;HRun=0;HaplotypeScore=129.6125;InbreedingCoeff=0.9025;MQ=88.85;MQ0=1;MQRankSum=-7.674;QD=47.87;ReadPosRankSum=1.756;VQSLOD=5.3153;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:22:36.03:745,36,0	0/0:10,0:10:27.09:0,27,788	0/0:28,0:28:44.30:0,44,1695	0/0:21,0:21:46.40:0,46,1314	1/1:4,35:39:81.21:1629,81,0	0/0:23,0:23:63.22:0,63,1916	0/0:14,0:14:39.13:0,39,1155	1/1:8,21:29:60.14:1058,60,0	0/0:17,0:17:51.18:0,51,1518	1/1:3,31:34:93.31:1878,93,0	1/1:2,25:27:60.16:1199,60,0	0/0:20,0:20:57.20:0,57,1752	0/0:21,0:21:51.17:0,51,1532	0/0:21,0:21:63.22:0,63,1934	1/1:0,22:22:63.22:1305,63,0	0/1:2,20:22:99:1117,0,121	1/1:1,14:15:36.12:746,36,0	1/1:1,3:4:9.03:186,9,0	1/1:2,5:7:15.05:311,15,0	1/1:2,25:27:69.24:1423,69,0	1/1:0,8:8:21.07:429,21,0	0/0:21,0:21:57.18:0,57,1645	0/0:30,0:30:78.27:0,78,2306	0/0:12,0:12:36.12:0,36,1046	1/1:0,24:24:63.22:1304,63,0	1/1:3,22:24:66.23:1347,66,0	1/1:4,34:38:99:2051,99,0	1/1:6,3:9:6.02:124,6,0
chr10	81777882	.	CAGAG	C	6111.63	PASS	AB=0.833;AC=40;AF=0.714;AN=56;BaseQRankSum=2.145;DP=452;FS=13.716;HRun=0;HaplotypeScore=122.0683;InbreedingCoeff=0.8393;MQ=59.04;MQ0=10;MQRankSum=-2.471;QD=19.84;ReadPosRankSum=2.757;VQSLOD=4.0009;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,13:22:27.09:447,27,0	0/0:9,0:9:21.07:0,21,492	0/0:35,0:19:8.15:0,8,190	0/0:39,0:17:14.59:0,15,169	1/1:4,11:15:17.97:298,18,0	1/1:6,1:19:12.80:79,13,0	0/0:15,0:15:33.10:0,33,732	1/1:18,5:22:21.03:296,21,0	0/1:4,0:8:2.53:3,0,26	1/1:11,6:18:33.07:477,33,0	1/1:7,9:16:26.33:405,26,0	1/1:0,0:7:9.77:29,10,0	0/0:9,0:18:32.70:0,33,501	0/0:4,0:10:15.05:0,15,226	1/1:3,4:7:11.53:158,12,0	1/1:4,5:8:18.06:288,18,0	1/1:6,6:11:15.05:248,15,0	1/1:9,8:17:9.86:386,10,0	1/1:7,5:12:18.06:298,18,0	1/1:8,15:24:42.09:644,42,0	1/1:4,3:6:9.03:136,9,0	0/0:7,0:18:33.11:0,33,579	1/1:5,0:11:10.59:34,11,0	0/1:5,0:5:0:0,0,0	1/1:11,16:27:48.46:773,48,0	1/1:11,10:20:33.96:598,34,0	1/1:12,6:16:24.05:363,24,0	1/1:3,6:8:9.03:149,9,0
chr10	81777933	.	A	AAG	6735.96	PASS	AB=0.830;AC=36;AF=0.643;AN=56;BaseQRankSum=0.534;DP=638;FS=0.000;HRun=0;HaplotypeScore=204.2881;InbreedingCoeff=0.3572;MQ=31.63;MQ0=45;MQRankSum=-2.876;QD=18.30;ReadPosRankSum=3.493;VQSLOD=4.5866;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,7:17:29.83:409,30,0	0/0:11,0:11:23.97:0,24,285	0/0:89,0:14:27:0,27,295	0/0:131,0:16:6:0,6,127	1/1:19,9:28:15.04:207,15,0	0/1:11,7:18:9.17:392,0,9	0/0:16,0:16:30.09:0,30,380	0/1:20,4:21:0.25:458,0,0	1/1:3,1:4:3.01:50,3,0	1/1:19,7:25:41.26:588,41,0	0/1:13,7:20:21.48:366,0,21	1/1:3,6:8:15.05:252,15,0	0/1:14,0:14:27.07:58,0,27	0/1:9,0:9:14:14,0,35	1/1:4,1:4:6.89:77,7,0	1/1:5,6:10:18.01:275,18,0	0/1:6,5:10:1.54:232,0,2	1/1:9,3:12:9.17:197,9,0	0/1:8,4:12:9.42:205,0,9	1/1:16,7:23:13.88:333,14,0	1/1:1,5:6:12.04:188,12,0	0/0:19,0:19:11.03:0,11,193	1/1:14,12:26:10.27:422,10,0	0/0:2,0:2:1.82:0,2,5	1/1:27,13:40:52.34:717,52,0	0/1:20,3:22:1.97:327,0,2	1/1:12,10:20:48.83:710,49,0	1/1:2,3:6:17.27:259,17,0
chr10	81777943	.	G	GA	654.04	PASS	AB=0.988;AC=29;AF=0.518;AN=56;BaseQRankSum=1.386;DP=609;FS=1.078;HRun=1;HaplotypeScore=212.1955;InbreedingCoeff=-0.1237;MQ=29.38;MQ0=42;MQRankSum=-1.836;QD=1.86;ReadPosRankSum=4.373;VQSLOD=-0.6967;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,1:17:7.47:62,7,0	0/0:11,0:11:15.47:0,15,330	0/0:84,0:11:29.58:0,30,343	0/0:126,0:11:24.53:0,25,275	1/1:24,1:24:6.89:21,7,0	0/1:18,0:18:37.41:37,0,152	0/0:15,0:15:36.59:0,37,499	0/1:20,0:17:19.99:20,0,79	1/1:5,0:5:2.02:6,2,0	0/1:26,0:25:99:112,0,118	0/1:21,1:22:33.84:34,0,53	0/1:8,0:7:2.85:15,0,3	0/1:11,0:11:16.80:17,0,70	0/1:8,0:8:5.54:6,0,52	0/1:5,0:4:2.44:23,0,2	0/1:11,0:10:11.05:38,0,11	0/1:9,1:9:9.74:23,0,10	1/1:6,0:6:11.53:33,12,0	0/1:11,0:9:2.12:2,0,104	0/1:23,0:21:12.91:26,0,13	1/1:5,0:5:6.11:17,6,0	0/0:18,0:18:28.67:0,29,290	0/1:27,0:27:23.98:24,0,25	0/1:5,0:4:0:0,0,0	0/1:36,1:37:69.09:85,0,69	0/1:18,1:18:61.22:61,0,82	0/1:25,0:23:16.37:99,0,16	1/1:6,0:6:12.75:58,13,0
chr10	81777960	.	A	AGAG	317.89	PASS	AB=0.968;AC=14;AF=0.250;AN=56;BaseQRankSum=7.874;DP=612;FS=2.297;HRun=0;HaplotypeScore=222.9776;InbreedingCoeff=-0.1367;MQ=28.04;MQ0=42;MQRankSum=-0.419;QD=1.05;ReadPosRankSum=-0.886;VQSLOD=2.6544;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:10.05:0,10,183	0/0:10,0:10:18.58:0,19,316	0/1:88,0:5:24.35:24,0,167	0/0:122,0:15:11.39:0,11,344	0/0:22,2:23:9.47:0,9,149	0/1:19,0:19:2.18:2,0,366	0/0:14,0:14:32.60:0,33,520	0/0:18,0:13:20.62:0,21,205	0/0:4,0:4:3.01:0,3,40	0/1:32,0:31:38.19:38,0,461	0/1:23,0:23:0.32:0,0,123	0/0:6,0:6:14.98:0,15,177	0/1:11,0:11:72.84:104,0,73	0/1:7,2:10:19.09:123,0,19	1/1:6,0:5:4.12:18,4,0	0/1:12,0:11:19.89:20,0,144	0/0:9,0:8:8.31:0,8,91	0/0:6,0:6:7.71:0,8,120	0/0:13,0:10:23.86:0,24,251	0/0:21,0:17:6.07:0,6,184	0/0:5,0:4:3.01:0,3,41	0/0:13,0:13:11.58:0,12,139	0/0:18,7:25:20.38:0,20,307	0/1:6,0:4:0.04:0,0,0	0/1:33,3:37:62.73:63,0,208	0/1:24,1:24:29.75:30,0,399	0/1:22,3:23:28.88:29,0,337	0/1:7,0:7:5.06:5,0,166
chr10	81777971	.	G	GGAGA	6451.94	PASS	AB=0.731;AC=45;AF=0.804;AN=56;BaseQRankSum=1.332;DP=555;FS=8.013;HRun=0;HaplotypeScore=192.7112;InbreedingCoeff=0.5898;MQ=31.94;MQ0=33;MQRankSum=-2.163;QD=18.54;ReadPosRankSum=1.088;VQSLOD=3.9757;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,5:11:16.34:296,16,0	0/0:7,0:8:16.65:0,17,245	0/0:82,0:8:19.29:0,19,207	0/0:99,0:12:17.98:0,18,271	1/1:13,8:23:15.62:274,16,0	1/1:10,3:18:17.22:361,17,0	0/0:14,0:14:29.88:0,30,482	1/1:15,0:12:10.66:279,11,0	1/1:3,1:6:5.98:97,6,0	1/1:18,8:32:42.04:984,42,0	1/1:11,6:21:9.96:173,10,0	1/1:2,3:6:12.04:293,12,0	1/1:7,0:10:11.28:103,11,0	1/1:8,0:10:13.83:90,14,0	1/1:4,0:5:4.26:49,4,0	1/1:5,1:11:13.86:210,14,0	1/1:1,5:7:5.89:92,6,0	1/1:4,1:5:6.02:123,6,0	1/1:8,2:7:11.31:176,11,0	1/1:12,3:13:22.17:349,22,0	1/1:3,1:3:3.01:78,3,0	0/1:9,0:14:6.40:47,0,6	1/1:17,3:22:10.91:164,11,0	0/1:2,2:4:0:0,0,0	1/1:19,6:29:46.09:890,46,0	1/1:14,6:24:23.11:664,23,0	1/1:13,3:22:32.86:543,33,0	0/1:5,1:6:13.98:116,0,14
chr10	81778283	.	AGAGC	A	886.12	PASS	AB=0.975;AC=24;AF=0.444;AN=54;BaseQRankSum=-4.755;DP=395;FS=0.000;HRun=0;HaplotypeScore=95.8308;InbreedingCoeff=-0.0162;MQ=44.42;MQ0=18;MQRankSum=-0.314;QD=3.54;ReadPosRankSum=-1.533;VQSLOD=1.7655;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:9,0:7:9.59:10,0,10	0/0:25,0:3:10.75:0,11,66	0/1:19,0:4:12.82:23,0,13	0/0:9,7:14:0:0,0,1	0/1:11,0:11:1.18:1,0,3	1/1:19,0:18:5.63:87,6,0	0/1:24,0:20:73.66:136,0,74	0/0:14,0:14:4.03:0,4,50	0/1:11,0:9:33.75:34,0,73	0/1:7,5:10:0.54:6,0,1	0/0:21,0:21:6.08:0,6,34	0/1:16,0:15:1.48:42,0,1	1/1:9,0:7:2.77:17,3,0	0/1:20,0:18:20.63:150,0,21	0/0:22,0:20:2.68:0,3,45	1/1:5,0:5:7.53:70,8,0	1/1:1,0:1:1.55:4,2,0	1/1:9,0:8:22.96:146,23,0	0/1:20,0:20:10.27:10,0,26	0/0:7,0:6:5.81:0,6,33	0/0:14,0:14:5.50:0,5,18	1/1:12,0:9:4.72:29,5,0	0/0:11,0:11:3.31:0,3,15	0/1:18,0:17:40.98:111,0,41	0/1:14,0:13:74.42:74,0,130	0/1:21,0:17:27.18:82,0,27	0/0:10,0:10:5.34:0,5,54
chr10	81778285	.	AGC	A	1328.28	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=-2.944;DP=405;FS=17.491;HRun=0;HaplotypeScore=93.3810;InbreedingCoeff=0.2973;MQ=44.53;MQ0=18;MQRankSum=-2.211;QD=3.98;ReadPosRankSum=1.456;VQSLOD=1.2170;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:2.99:24,3,0	1/1:10,0:8:7.11:56,7,0	0/0:25,0:3:10.89:0,11,73	0/0:19,0:4:0.61:0,1,24	0/0:16,0:14:0:0,0,0	1/1:11,0:11:1.17:3,1,0	1/1:14,3:18:5.43:37,5,0	1/1:25,0:21:34.93:274,35,0	1/1:14,0:14:3.63:15,4,0	1/1:11,0:9:3.03:55,3,0	0/1:12,0:10:0.25:4,0,0	1/1:21,1:22:6.53:26,7,0	1/1:16,0:15:8.30:53,8,0	1/1:9,0:7:2.92:17,3,0	1/1:22,0:20:6.38:103,6,0	1/1:10,12:20:6.72:75,7,0	1/1:5,0:5:7.50:53,8,0	1/1:1,0:1:1.55:4,2,0	1/1:9,0:8:23.59:154,24,0	1/1:20,0:20:0.84:16,1,0	0/1:8,0:7:4.43:16,0,4	1/1:14,0:14:0.68:1,1,0	1/1:12,0:9:2.15:7,2,0	0/0:11,0:11:2.22:0,2,8	1/1:17,0:17:15.86:99,16,0	1/1:15,1:15:2.02:138,2,0	1/1:20,1:17:26.93:175,27,0	1/1:11,0:11:0.72:38,1,0
chr10	81778323	.	A	AGC	2747.22	PASS	AB=0.633;AC=27;AF=0.482;AN=56;BaseQRankSum=0.372;DP=637;FS=2.669;HRun=0;HaplotypeScore=232.3095;InbreedingCoeff=0.9213;MQ=58.33;MQ0=17;MQRankSum=-1.639;QD=9.41;ReadPosRankSum=3.049;VQSLOD=3.5598;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:9.39:0,9,64	0/0:13,0:12:4.96:0,5,89	0/0:38,0:20:34.54:0,35,396	0/0:56,0:30:79.36:0,79,809	1/1:16,1:18:19.28:161,19,0	0/0:16,0:16:18.12:0,18,140	0/0:26,0:25:25.55:0,26,190	0/0:41,0:39:62.24:0,62,635	0/0:20,0:20:21.39:0,21,156	1/1:20,1:20:38.48:305,38,0	1/1:18,0:17:22.26:160,22,0	0/0:22,0:22:31.57:0,32,233	0/0:28,0:25:37.30:0,37,304	0/0:13,0:12:11.62:0,12,94	1/1:24,0:24:29.68:258,30,0	1/1:24,0:24:31.04:225,31,0	1/1:12,0:12:17.70:130,18,0	1/1:8,0:8:14.96:119,15,0	1/1:21,0:19:32.51:257,33,0	0/1:16,22:38:0.30:55,0,0	1/1:17,0:16:26.77:209,27,0	0/0:25,0:25:17.67:0,18,143	0/0:21,0:18:20.46:0,20,204	0/0:20,0:20:23.54:0,24,174	1/1:19,1:22:31.17:216,31,0	1/1:24,1:24:32.73:369,33,0	1/1:23,1:22:13.13:158,13,0	1/1:15,1:16:42.83:350,43,0
chr10	81779840	.	CA	C	1294.67	PASS	AB=0.972;AC=33;AF=0.589;AN=56;BaseQRankSum=12.187;DP=485;FS=2.897;HRun=2;HaplotypeScore=78.3835;InbreedingCoeff=0.3222;MQ=88.55;MQ0=0;MQRankSum=-4.492;QD=3.44;ReadPosRankSum=8.072;VQSLOD=0.0091;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:4.52:58,5,0	0/0:12,0:11:36.11:0,36,516	0/0:15,0:15:38.86:0,39,496	0/0:21,0:22:61.67:0,62,815	0/1:19,1:20:3.88:79,0,4	0/1:22,1:23:10.69:94,0,11	0/0:15,0:15:39.08:0,39,538	0/1:29,0:29:32.23:32,0,70	0/1:10,0:10:1.04:56,0,1	0/1:10,0:10:6.33:6,0,14	0/1:16,0:16:28.29:28,0,44	1/1:12,2:14:26.52:118,27,0	0/0:17,0:17:45.10:0,45,591	0/0:13,0:13:39.12:0,39,553	1/1:15,0:15:19.35:49,19,0	1/1:19,0:19:26:72,26,0	1/1:19,0:19:17.89:88,18,0	1/1:16,0:16:1.97:65,2,0	1/1:13,0:13:8.71:35,9,0	1/1:19,4:23:2.52:157,3,0	1/1:14,0:14:17.66:45,18,0	0/0:15,0:15:45.09:0,45,626	1/1:17,2:19:28.59:108,29,0	0/1:25,0:25:55.83:66,0,56	0/1:10,1:11:31.91:33,0,32	0/1:20,2:22:41.69:92,0,42	1/1:30,0:29:9.35:121,9,0	1/1:12,0:12:25.69:82,26,0
chr10	81779842	.	AC	A	9512.75	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=4.201;DP=480;FS=2.050;HRun=7;HaplotypeScore=52.8974;InbreedingCoeff=0.9990;MQ=91.06;MQ0=0;MQRankSum=-4.968;QD=25.71;ReadPosRankSum=4.367;VQSLOD=5.2611;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:16:42.09:426,42,0	0/0:13,0:12:36.10:0,36,440	0/0:15,0:15:33.54:0,34,386	0/0:25,0:25:62.35:0,62,755	1/1:2,18:20:54.08:540,54,0	1/1:3,19:22:54.08:540,54,0	0/0:13,0:13:33.11:0,33,415	1/1:3,25:28:75.11:739,75,0	1/1:2,9:11:27.06:275,27,0	1/1:0,9:9:27.06:275,27,0	1/1:2,12:14:36.08:366,36,0	1/1:4,10:14:39.08:396,39,0	0/0:16,0:16:39.09:0,39,462	0/0:13,0:13:36.11:0,36,451	1/1:0,15:15:42.10:428,42,0	1/1:1,17:18:48.06:489,48,0	1/1:1,19:20:51.12:520,51,0	1/1:3,13:16:30.07:305,30,0	1/1:3,10:13:36.07:362,36,0	1/1:5,17:22:60.06:590,60,0	1/1:0,14:14:30.07:306,30,0	0/0:15,0:15:42.13:0,42,527	1/1:2,17:19:45.10:456,45,0	1/1:7,18:25:51.11:519,51,0	1/1:3,8:11:27.06:275,27,0	1/1:5,17:22:57.12:575,57,0	1/1:4,24:28:75.16:762,75,0	1/1:0,13:13:36.08:367,36,0
chr10	81779849	.	CA	C	1916.85	PASS	AB=0.955;AC=33;AF=0.589;AN=56;BaseQRankSum=11.818;DP=500;FS=3.435;HRun=1;HaplotypeScore=80.8177;InbreedingCoeff=0.3918;MQ=90.57;MQ0=0;MQRankSum=-5.085;QD=4.92;ReadPosRankSum=8.643;VQSLOD=0.2022;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,2:17:10.99:118,11,0	0/0:13,0:12:39.11:0,39,499	0/0:15,0:15:44.73:0,45,409	0/0:26,0:26:68.28:0,68,915	1/1:20,0:20:17.88:102,18,0	1/1:22,0:22:25.38:109,25,0	0/0:13,0:13:38.92:0,39,462	0/1:32,0:32:44.62:45,0,100	0/1:10,1:11:0.82:65,0,1	0/1:15,0:15:14.57:15,0,96	1/1:13,0:13:4.02:56,4,0	0/1:14,2:16:12.94:124,0,13	0/0:14,0:14:42.11:0,42,546	0/0:13,0:13:19.17:0,19,447	1/1:17,0:17:30.15:85,30,0	0/1:20,1:21:7.99:95,0,8	1/1:19,0:19:37.93:126,38,0	1/1:15,1:16:9.76:96,10,0	0/1:15,2:17:36.32:73,0,36	1/1:23,1:24:6.22:176,6,0	0/1:15,0:15:1.34:34,0,1	0/0:16,0:16:48.07:0,48,579	1/1:20,0:20:18.90:128,19,0	1/1:18,3:21:34.39:200,34,0	0/1:10,0:10:3.67:30,0,4	1/1:21,0:21:34.11:122,34,0	0/1:28,2:29:7.61:216,0,8	1/1:13,0:13:28.05:95,28,0
chr10	81782276	.	TTCTCTC	T	4249.53	PASS	AB=0.909;AC=28;AF=0.519;AN=54;BaseQRankSum=0.499;DP=605;FS=12.518;HRun=0;HaplotypeScore=177.7842;InbreedingCoeff=0.5346;MQ=57.81;MQ0=10;MQRankSum=-4.350;QD=12.00;ReadPosRankSum=0.613;VQSLOD=3.2832;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,6:28:17.74:285,18,0	0/0:14,0:14:21.07:0,21,534	./.	0/1:38,0:17:0.01:0,0,0	1/1:20,2:22:12.04:217,12,0	0/0:18,0:20:40.29:0,40,523	0/0:27,0:27:36.99:0,37,890	0/1:32,0:35:42.06:49,0,42	0/0:11,0:17:12.04:0,12,154	0/1:15,3:20:23.48:537,0,23	1/1:10,5:15:11.98:115,12,0	0/0:20,0:23:18.83:0,19,292	0/0:18,0:19:27.09:0,27,648	0/0:16,0:18:8.72:0,9,181	1/1:17,4:22:22.03:253,22,0	1/1:16,7:23:29.70:404,30,0	0/1:11,1:12:59.89:108,0,60	1/1:4,4:8:6.02:124,6,0	0/1:20,0:19:58.58:143,0,59	1/1:16,2:19:16.85:254,17,0	1/1:15,0:15:3.46:25,3,0	0/0:22,0:24:27.38:0,27,643	0/0:17,0:19:20.89:0,21,278	0/0:26,0:30:34.53:0,35,510	0/1:16,2:20:62.57:191,0,63	1/1:18,6:27:42.05:706,42,0	1/1:16,5:24:35.30:600,35,0	1/1:2,3:5:12.04:239,12,0
chr10	81782304	.	CTCTCTCTA	C	2370.85	PASS	AB=0.981;AC=16;AF=0.286;AN=56;BaseQRankSum=4.027;DP=486;FS=17.842;HRun=0;HaplotypeScore=178.1310;InbreedingCoeff=-0.2362;MQ=41.46;MQ0=14;MQRankSum=-4.484;QD=9.08;ReadPosRankSum=2.767;VQSLOD=1.1623;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:17.01:152,0,17	0/0:8,0:8:24.07:0,24,689	0/0:11,0:3:1.08:0,1,22	0/0:25,0:4:8.93:0,9,85	0/1:17,1:18:12.32:71,0,12	0/0:22,0:21:15.79:0,16,792	0/0:18,0:18:45.96:0,46,1134	0/1:28,0:27:10.50:10,0,363	0/0:9,0:8:14.80:0,15,301	0/1:21,1:22:59.87:514,0,60	0/0:13,0:12:2.68:0,3,32	0/0:17,0:17:14.85:0,15,460	0/0:18,0:18:41.56:0,42,811	0/1:15,0:16:1.65:2,0,210	0/1:20,0:20:46.81:108,0,47	0/1:20,0:20:62.04:193,0,62	0/1:10,0:10:80.34:80,0,95	0/1:7,0:7:10.92:85,0,11	0/1:8,0:7:65.04:102,0,65	0/1:15,0:15:66.49:66,0,80	0/0:14,0:13:2.25:0,2,19	0/0:25,0:25:26.99:0,27,738	0/0:12,0:12:32.81:0,33,489	0/0:32,0:28:46.67:0,47,803	0/1:21,0:21:36.47:36,0,169	0/1:20,1:21:11.98:590,0,12	1/1:25,0:25:16.53:331,17,0	0/1:6,1:6:20.96:187,0,21
chr10	81782306	.	CTCTCTA	C	3164.89	PASS	AB=0.974;AC=23;AF=0.411;AN=56;BaseQRankSum=1.683;DP=469;FS=20.872;HRun=0;HaplotypeScore=159.0743;InbreedingCoeff=-0.0029;MQ=40.38;MQ0=14;MQRankSum=-2.514;QD=9.98;ReadPosRankSum=1.712;VQSLOD=1.5801;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:0.54:215,0,1	0/0:8,0:8:24.04:0,24,518	0/0:13,0:3:1.08:0,1,22	0/0:25,0:4:8.85:0,9,59	0/1:20,0:20:9.99:159,0,10	0/0:20,0:19:7.47:0,7,394	0/0:17,0:17:42.22:0,42,798	0/1:28,1:28:99:152,0,160	0/0:9,0:8:14.80:0,15,199	0/1:19,0:19:35.67:546,0,36	1/1:12,0:11:6.82:42,7,0	0/0:17,0:17:5.33:0,5,193	0/0:17,0:17:25.48:0,25,510	0/1:15,0:15:4.42:4,0,126	1/1:19,1:20:11.93:177,12,0	0/1:18,0:18:9.33:244,0,9	0/1:5,3:8:50.20:85,0,50	0/1:7,0:7:10.86:92,0,11	0/1:9,0:8:44.92:134,0,45	0/1:12,0:12:3.97:146,0,4	0/1:13,0:12:0:1,0,0	0/0:25,0:25:27.33:0,27,533	0/1:9,0:9:1.42:1,0,203	0/1:32,0:28:4.21:4,0,368	0/1:18,2:20:54.52:127,0,55	1/1:19,1:20:7.54:572,8,0	1/1:24,0:24:28.09:456,28,0	0/1:7,0:6:20.88:170,0,21
chr10	81782312	.	AAC	A	1078.87	PASS	AB=0.919;AC=25;AF=0.521;AN=48;BaseQRankSum=2.807;DP=461;FS=0.000;HRun=0;HaplotypeScore=147.0971;InbreedingCoeff=0.4741;MQ=37.46;MQ0=15;MQRankSum=-4.918;QD=4.95;ReadPosRankSum=-0.724;VQSLOD=2.8734;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,8:23:2.96:0,3,20	0/0:6,0:6:11.97:0,12,135	0/0:13,0:3:3:0,3,47	0/0:24,0:5:12.04:0,12,170	0/0:12,8:19:3.01:0,3,47	0/0:18,0:17:14.12:0,14,121	0/0:17,0:17:6.49:0,6,92	0/1:22,4:25:28.24:145,0,28	0/0:11,0:10:6.47:0,6,72	1/1:10,7:17:22.23:214,22,0	./.	0/1:18,0:18:6.23:6,0,60	1/1:16,0:16:11.07:37,11,0	1/1:17,0:16:1.82:5,2,0	1/1:14,5:19:1.54:17,2,0	1/1:10,8:17:5.90:56,6,0	0/1:7,1:8:9.80:24,0,10	1/1:6,2:7:6.01:63,6,0	1/1:5,2:7:8.82:82,9,0	1/1:7,5:12:3.01:35,3,0	./.	./.	0/0:8,0:8:7.26:0,7,85	0/0:31,0:29:12.04:0,12,124	./.	1/1:12,6:20:37.19:345,37,0	1/1:15,8:25:10.56:130,11,0	1/1:5,2:6:9.33:84,9,0
chr10	81782333	.	ACACGCACG	A	1579.87	PASS	AB=0.992;AC=28;AF=0.519;AN=54;BaseQRankSum=3.255;DP=505;FS=42.750;HRun=0;HaplotypeScore=166.4377;InbreedingCoeff=-0.1961;MQ=32.97;MQ0=36;MQRankSum=-1.499;QD=3.80;ReadPosRankSum=-1.335;VQSLOD=1.3217;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:23:2.73:45,3,0	0/0:9,0:7:8.94:0,9,150	0/0:13,0:3:2.64:0,3,55	0/0:20,0:5:12.44:0,12,166	0/0:18,0:17:2.63:0,3,84	0/1:23,0:21:53.89:54,0,288	0/1:8,0:8:0.42:0,0,33	0/1:27,0:26:99:154,0,156	0/0:10,0:8:5.15:0,5,107	0/1:17,0:17:44.53:45,0,172	0/1:23,0:22:0:0,0,0	0/1:18,0:17:37.07:72,0,37	1/1:16,4:17:39.65:634,40,0	1/1:17,0:16:3.01:62,3,0	0/1:26,0:26:11.25:31,0,11	0/1:21,1:20:21.72:22,0,26	1/1:8,0:6:4.56:31,5,0	0/1:12,0:7:19.98:23,0,20	0/1:6,0:6:35.23:56,0,35	1/1:20,0:20:0.89:3,1,0	0/1:24,0:11:0:1,0,0	0/1:21,2:22:0:1,0,0	0/1:11,0:10:15.19:15,0,118	0/1:30,0:24:17.69:18,0,164	./.	0/1:26,0:26:99:295,0,162	0/1:22,0:22:14:107,0,14	1/1:8,0:4:2.43:54,2,0
chr10	81782335	.	ACGCACG	A	1750.19	PASS	AB=0.959;AC=29;AF=0.537;AN=54;BaseQRankSum=3.593;DP=491;FS=47.630;HRun=0;HaplotypeScore=150.4653;InbreedingCoeff=-0.1116;MQ=32.78;MQ0=39;MQRankSum=-0.772;QD=4.32;ReadPosRankSum=0.098;VQSLOD=1.2766;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:24:2.73:45,3,0	0/0:8,0:6:3.31:0,3,81	0/0:13,0:3:2.64:0,3,55	0/0:20,0:5:12.44:0,12,166	0/0:16,0:16:2.53:0,3,70	0/1:24,0:21:54.87:55,0,201	0/1:7,0:7:0.41:0,0,33	0/1:25,0:24:99:159,0,144	0/0:9,0:7:4.23:0,4,79	0/1:15,0:15:90:90,0,94	0/1:23,0:22:0:0,0,0	0/1:16,0:17:37.06:72,0,37	1/1:16,4:17:39.75:630,40,0	1/1:3,13:15:3.01:68,3,0	0/1:24,0:24:11.20:30,0,11	0/1:21,0:19:8.54:22,0,9	1/1:8,0:6:4.56:31,5,0	0/1:12,0:7:1.91:24,0,2	0/1:6,0:6:36.51:58,0,37	1/1:20,0:20:0.89:3,1,0	0/1:23,0:11:0:1,0,0	0/1:5,17:21:0:1,0,0	0/1:12,0:11:15.19:15,0,104	0/1:30,0:24:33.17:33,0,125	./.	0/1:23,1:24:85.54:350,0,86	1/1:19,0:18:3.20:110,3,0	1/1:8,0:4:11.75:93,12,0
chr10	81782339	.	ACG	A	591.89	PASS	AB=0.995;AC=29;AF=0.537;AN=54;BaseQRankSum=4.754;DP=505;FS=37.839;HRun=0;HaplotypeScore=148.0638;InbreedingCoeff=-0.1177;MQ=32.36;MQ0=44;MQRankSum=-0.906;QD=1.40;ReadPosRankSum=1.770;VQSLOD=1.4310;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:21:0.11:1,0,0	0/1:8,0:6:0.11:0,0,23	0/0:13,0:3:2.80:0,3,27	0/0:20,0:5:12.44:0,12,97	1/1:18,1:18:0.14:1,0,0	0/1:25,0:22:26.68:37,0,27	0/0:8,0:8:4.52:0,5,15	0/1:26,0:25:39.14:39,0,117	1/1:7,1:6:1.14:4,1,0	0/1:14,0:14:24.30:48,0,24	0/1:26,0:24:0:0,0,0	0/1:17,0:16:22.27:22,0,26	1/1:20,0:17:35.93:238,36,0	1/1:15,0:14:2.98:22,3,0	0/1:24,0:24:9.59:22,0,10	0/1:23,0:20:6.90:8,0,7	1/1:8,0:6:2.22:7,2,0	0/1:11,0:6:0.76:4,0,1	0/1:7,0:7:17.64:18,0,30	0/0:20,0:20:2.80:0,3,13	0/1:24,1:12:0:0,0,0	0/1:21,0:20:0:0,0,0	0/1:13,0:12:5.23:5,0,30	0/1:31,0:25:45.91:50,0,46	./.	0/1:27,0:27:52.34:112,0,52	0/1:21,1:20:11.55:27,0,12	1/1:8,0:4:8.10:56,8,0
chr10	81782341	.	GCACACA	G	980.90	PASS	AB=0.995;AC=18;AF=0.409;AN=44;BaseQRankSum=0.188;DP=505;FS=5.637;HRun=0;HaplotypeScore=158.3793;InbreedingCoeff=0.0008;MQ=32.23;MQ0=45;MQRankSum=-2.237;QD=3.66;ReadPosRankSum=0.537;VQSLOD=2.2241;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:22:0.25:0,0,0	0/1:8,0:6:15.94:32,0,16	./.	0/0:17,0:5:0.47:0,0,1	0/0:19,0:18:2.44:0,2,24	0/0:23,0:20:15.48:0,15,173	./.	1/1:15,11:25:32.80:467,33,0	0/0:9,0:6:5.74:0,6,37	0/0:14,0:14:2.54:0,3,126	./.	1/1:17,0:16:2.79:32,3,0	0/1:19,0:16:32.27:129,0,32	1/1:16,0:15:3.01:30,3,0	1/1:26,0:26:2.32:16,2,0	0/0:23,0:20:5.01:0,5,27	0/0:6,1:5:0:0,0,0	0/1:12,0:7:7.31:7,0,20	0/1:7,0:7:14.98:27,0,15	0/1:20,0:20:0:0,0,0	./.	./.	0/0:13,0:12:2.65:0,3,50	0/1:32,0:25:34.56:35,0,43	./.	0/1:29,0:29:99:255,0,110	0/1:20,1:19:2.83:69,0,3	0/1:8,0:4:1.59:2,0,11
chr10	81782364	.	CACAGAGAGAGAGAGAGAG	C	2606.79	PASS	AB=0.888;AC=31;AF=0.738;AN=42;BaseQRankSum=3.467;DP=457;FS=0.000;HRun=0;HaplotypeScore=159.5445;InbreedingCoeff=0.0434;MQ=33.57;MQ0=47;MQRankSum=-0.807;QD=7.78;ReadPosRankSum=2.115;VQSLOD=2.2912;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:17:0:0,0,0	1/1:6,0:4:1.02:20,1,0	./.	./.	1/1:16,1:16:3.81:27,4,0	0/1:25,0:21:8.95:9,0,267	./.	0/1:21,0:18:99:117,0,194	0/1:10,0:7:15.56:16,0,198	1/1:10,0:10:23.89:369,24,0	./.	0/0:5,0:19:3.01:0,3,95	1/1:17,0:14:11.35:69,11,0	1/1:14,0:13:1.82:5,2,0	1/1:5,17:24:1.51:152,2,0	1/1:10,0:22:12.12:168,12,0	0/0:6,0:4:0:0,0,0	1/1:13,0:8:5.77:36,6,0	1/1:7,0:6:2.91:19,3,0	0/1:7,14:21:0:0,0,0	./.	./.	1/1:13,0:12:0.94:2,1,0	0/1:33,0:25:5.78:6,0,502	./.	0/1:12,18:32:84.46:1290,0,84	1/1:12,0:17:14.92:397,15,0	1/1:6,0:2:2.87:15,3,0
chr10	81782366	.	CAGAGAGAGAG	C	1326.97	PASS	AB=0.955;AC=17;AF=0.531;AN=32;BaseQRankSum=4.190;DP=459;FS=0.000;HRun=0;HaplotypeScore=144.7099;InbreedingCoeff=0.5645;MQ=33.55;MQ0=47;MQRankSum=-2.404;QD=7.54;ReadPosRankSum=3.060;VQSLOD=2.0738;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:4:0.89:0,1,2	./.	./.	1/1:13,0:14:0.67:2,1,0	0/0:22,1:20:6.48:0,6,71	0/0:12,0:11:6.02:0,6,101	0/0:24,0:21:9.99:0,10,45	0/0:11,0:8:3.01:0,3,31	1/1:7,0:9:6.02:145,6,0	./.	0/0:20,0:19:2.41:0,2,9	1/1:12,5:14:9.03:183,9,0	./.	1/1:24,0:24:1.93:68,2,0	1/1:25,0:22:8.65:246,9,0	./.	./.	./.	0/1:20,0:21:0:0,0,0	./.	./.	1/1:7,0:13:0.47:1,0,0	0/0:32,0:24:13.23:0,13,111	./.	1/1:31,0:32:29.09:577,29,0	1/1:17,0:17:9.03:222,9,0	./.
chr10	81784448	.	AG	A	1039.55	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-1.765;DP=436;FS=7.809;HRun=9;HaplotypeScore=67.3161;InbreedingCoeff=0.8210;MQ=79.07;MQ0=0;MQRankSum=-1.838;QD=14.05;ReadPosRankSum=-0.641;VQSLOD=3.1234;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:24.04:0,24,263	0/0:8,0:8:21.02:0,21,219	0/0:14,0:14:35.93:0,36,380	0/0:14,0:13:9.03:0,9,190	0/0:24,0:24:51.10:0,51,554	0/0:31,0:31:75.21:0,75,856	0/0:9,0:9:24.06:0,24,267	0/1:24,0:24:2:2,0,311	0/0:12,0:12:36.11:0,36,415	0/0:18,0:18:42.05:0,42,443	0/0:13,0:13:12.60:0,13,222	0/0:14,0:14:30.09:0,30,346	1/1:0,17:17:45.02:412,45,0	1/1:1,17:18:51.03:467,51,0	0/0:19,0:19:48.05:0,48,506	0/0:15,0:15:25.46:0,25,431	0/0:15,0:15:36.07:0,36,393	0/0:18,0:18:17.54:0,18,392	0/0:14,0:14:30.09:0,30,344	0/0:21,0:21:36.05:0,36,384	0/0:6,0:6:18.05:0,18,207	1/1:3,12:15:33.02:302,33,0	0/0:18,0:18:48.14:0,48,554	0/0:15,0:15:42.12:0,42,485	0/0:9,0:9:7.40:0,7,215	0/0:16,0:16:18.30:0,18,329	0/0:27,0:27:69.20:0,69,788	0/0:3,0:3:9.03:0,9,103
chr10	81784984	.	G	GTGTA	9247.53	PASS	AB=0.843;AC=46;AF=0.821;AN=56;BaseQRankSum=4.460;DP=924;FS=4.192;HRun=0;HaplotypeScore=290.1293;InbreedingCoeff=0.7031;MQ=57.47;MQ0=5;MQRankSum=-0.929;QD=11.10;ReadPosRankSum=-0.331;VQSLOD=3.9660;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:16.73:145,17,0	0/0:12,0:12:21.05:0,21,307	0/0:30,0:23:6.02:0,6,87	0/0:21,0:17:8.89:0,9,82	1/1:32,0:32:20.88:176,21,0	0/1:19,0:35:6.82:322,0,7	0/0:27,0:28:48.12:0,48,667	1/1:48,0:48:46.84:336,47,0	1/1:9,0:25:12.04:205,12,0	1/1:51,0:51:46.21:559,46,0	1/1:33,0:33:40.04:335,40,0	1/1:19,2:34:12.04:196,12,0	1/1:21,33:54:28.22:1146,28,0	1/1:18,20:38:42.13:928,42,0	1/1:47,0:47:51.45:402,51,0	1/1:38,0:38:23.55:167,24,0	0/1:27,0:27:5.85:73,0,6	1/1:31,0:31:19.33:122,19,0	1/1:19,0:17:18.99:156,19,0	1/1:33,0:33:47.64:361,48,0	1/1:26,0:26:8.05:107,8,0	1/1:8,20:29:57.19:1144,57,0	1/1:14,0:28:29.65:433,30,0	1/1:13,1:24:10.97:128,11,0	1/1:51,0:51:56.14:446,56,0	1/1:49,0:49:75.77:714,76,0	1/1:44,0:44:62:535,62,0	1/1:14,0:14:11.99:114,12,0
chr10	81785009	.	TG	T	6764.64	PASS	AB=0.699;AC=16;AF=0.286;AN=56;BaseQRankSum=-2.629;DP=965;FS=8.378;HRun=1;HaplotypeScore=244.6434;InbreedingCoeff=-0.4001;MQ=50.61;MQ0=14;MQRankSum=3.327;QD=11.22;ReadPosRankSum=-4.988;VQSLOD=0.7823;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,12:28:99:356,0,411	0/0:9,0:9:27.09:0,27,420	0/0:31,0:13:36.08:0,36,501	0/0:20,0:13:39.12:0,39,577	0/1:19,16:35:99:427,0,402	0/0:39,0:39:61.72:0,62,843	0/0:30,0:30:85.14:0,85,1261	0/1:26,30:55:99:1088,0,705	0/0:29,0:29:39.11:0,39,532	0/1:29,24:53:99:731,0,1126	0/1:27,11:38:99:313,0,848	0/0:29,0:29:30.10:0,30,446	0/0:56,0:54:99:0,102,1251	0/0:33,0:33:69.05:0,69,782	0/1:27,22:49:99:487,0,984	0/1:18,17:35:99:431,0,654	0/1:15,12:27:99:277,0,321	0/1:18,15:33:99:308,0,331	0/1:14,13:25:99:422,0,486	0/1:23,12:35:99:207,0,800	0/1:14,9:23:67.73:68,0,294	0/0:33,0:33:95.76:0,96,1123	0/0:28,0:28:45.12:0,45,617	0/0:25,0:24:32.08:0,32,412	0/1:30,24:54:99:366,0,918	0/1:31,24:55:99:715,0,1135	0/1:26,19:45:99:428,0,911	0/1:6,4:10:99:140,0,161
chr10	81785033	.	TG	T	3428.12	PASS	AB=0.791;AC=12;AF=0.214;AN=56;BaseQRankSum=11.346;DP=936;FS=1.570;HRun=1;HaplotypeScore=251.6880;InbreedingCoeff=-0.2874;MQ=54.02;MQ0=14;MQRankSum=-13.022;QD=7.26;ReadPosRankSum=-2.230;VQSLOD=-0.2639;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:29:59.66:0,60,900	0/0:12,0:12:36.12:0,36,576	0/0:39,0:23:69.16:0,69,1057	0/0:21,0:17:39.13:0,39,591	0/1:22,13:35:99:130,0,861	0/0:31,0:31:69.23:0,69,1087	0/0:27,0:27:78.25:0,78,1222	0/0:46,0:45:74.20:0,74,1804	0/0:30,0:30:72.25:0,72,1140	0/1:35,14:49:99:404,0,1437	0/1:17,17:34:99:447,0,679	0/0:29,0:29:60.20:0,60,958	0/0:49,0:47:99:0,105,1673	0/0:32,0:32:75.73:0,76,1194	0/1:37,14:51:99:340,0,1391	0/1:32,8:40:99:213,0,1300	0/1:22,3:25:28.51:29,0,709	0/1:27,3:30:98.81:99,0,699	0/1:19,5:23:99:146,0,691	0/1:26,14:40:99:458,0,1126	0/0:12,1:13:18.06:0,18,287	0/0:35,0:35:99:0,102,1630	0/0:30,0:30:78.27:0,78,1243	0/0:24,0:24:44.73:0,45,710	0/1:34,19:53:99:530,0,1310	0/1:38,9:47:99:234,0,1547	0/1:30,14:44:99:398,0,1007	0/0:15,1:16:0.25:0,0,580
chr10	81785384	.	A	AAC	7717.27	PASS	AB=0.663;AC=31;AF=0.554;AN=56;BaseQRankSum=-4.700;DP=831;FS=6.420;HRun=0;HaplotypeScore=159.3468;InbreedingCoeff=0.1463;MQ=59.07;MQ0=6;MQRankSum=-2.513;QD=11.95;ReadPosRankSum=-1.576;VQSLOD=3.6744;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:39:27.01:247,27,0	0/0:10,0:10:15.04:0,15,169	0/0:29,0:15:2.37:0,2,8	0/0:39,0:21:5.72:0,6,33	0/1:11,13:23:59.62:453,0,60	1/1:19,0:33:23.84:184,24,0	0/0:28,0:30:36.52:0,37,489	1/1:23,12:37:7.99:392,8,0	1/1:13,0:33:48.80:394,49,0	0/1:20,19:42:31.60:683,0,32	0/1:11,9:21:71.45:261,0,71	1/1:20,0:38:26.11:172,26,0	0/0:11,0:31:51.20:0,51,253	0/0:8,0:24:31.25:0,31,154	0/1:17,12:32:31.73:408,0,32	0/1:18,16:34:0.80:426,0,1	0/1:15,17:32:38.49:763,0,38	1/1:12,1:23:17.02:216,17,0	0/1:7,6:13:12.85:232,0,13	0/1:12,12:25:34.75:356,0,35	0/1:20,25:49:99:520,0,100	0/0:5,0:20:34.09:0,34,168	1/1:18,0:26:17.24:116,17,0	1/1:24,0:34:14.20:107,14,0	1/1:16,13:29:2.20:457,2,0	0/1:16,15:33:59.72:557,0,60	0/1:19,20:41:16.66:635,0,17	1/1:1,4:5:9.03:138,9,0
chr10	81785926	.	C	CT	2152.01	PASS	AB=0.827;AC=10;AF=0.179;AN=56;BaseQRankSum=-11.402;DP=690;FS=12.835;HRun=10;HaplotypeScore=71.7392;InbreedingCoeff=0.7566;MQ=74.12;MQ0=0;MQRankSum=-0.389;QD=17.22;ReadPosRankSum=0.121;VQSLOD=3.1108;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:95.87:0,96,788	0/0:12,0:13:34.99:0,35,277	0/0:19,0:20:20.91:0,21,168	0/1:10,0:11:15.16:15,0,29	0/0:35,1:36:47.88:0,48,586	1/1:5,23:28:34.96:582,35,0	0/0:14,0:14:28.76:0,29,240	0/0:44,0:47:87.48:0,87,695	0/1:8,9:17:32.16:194,0,32	0/0:28,1:30:82.91:0,83,667	0/0:26,0:26:71.84:0,72,583	1/1:1,19:20:45.11:480,45,0	0/0:26,0:26:77.87:0,78,634	0/0:21,2:23:18.94:0,19,362	0/0:24,0:27:66.99:0,67,529	0/0:22,0:23:58.95:0,59,474	0/0:21,0:22:55.96:0,56,449	0/0:23,0:23:53.92:0,54,443	0/0:18,0:19:40.97:0,41,326	0/0:33,0:33:83.15:0,83,660	0/0:16,0:16:41.90:0,42,338	0/0:17,0:17:32.94:0,33,271	1/1:3,23:26:51.13:544,51,0	1/1:2,20:23:44.27:506,44,0	0/0:32,1:34:56.91:0,57,660	0/0:30,0:31:77.61:0,78,628	0/0:35,0:36:83.36:0,83,672	0/0:13,0:13:20.88:0,21,166
chr10	81787104	.	AT	A	2491.89	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.526;DP=660;FS=0.000;HRun=3;HaplotypeScore=61.7361;InbreedingCoeff=0.9989;MQ=89.04;MQ0=0;MQRankSum=-0.998;QD=30.02;ReadPosRankSum=4.448;VQSLOD=3.0650;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.20:0,60,864	0/0:13,0:13:39.13:0,39,561	0/0:29,0:29:81.23:0,81,1040	0/0:19,0:19:29.51:0,30,682	0/0:27,0:27:81.27:0,81,1166	0/0:27,0:27:78.25:0,78,1104	0/0:14,0:14:42.14:0,42,605	0/0:40,0:40:99:0,114,1610	0/0:22,0:22:66.22:0,66,950	0/0:33,0:33:99:0,99,1396	0/0:31,0:31:87.28:0,87,1226	0/0:16,0:16:45.15:0,45,647	1/1:1,24:25:66.21:818,66,0	1/1:0,21:21:51.16:632,51,0	0/0:31,0:31:90.30:0,90,1296	0/0:21,0:21:63.21:0,63,905	0/0:24,0:24:72.23:0,72,1008	0/0:14,0:14:36.11:0,36,500	0/0:12,0:12:36.12:0,36,518	0/0:38,0:38:99:0,105,1495	0/0:21,0:21:63.14:0,63,846	1/1:2,35:37:96.30:1185,96,0	0/0:21,0:21:63.21:0,63,907	0/0:15,0:15:45.15:0,45,645	0/0:22,0:22:66.22:0,66,951	0/0:25,0:25:75.25:0,75,1065	0/0:32,0:31:96.27:0,96,1342	0/0:8,0:8:24.08:0,24,345
chr10	81787351	.	C	CT	5613.19	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.612;DP=749;FS=16.072;HRun=1;HaplotypeScore=86.1398;InbreedingCoeff=0.9914;MQ=87.47;MQ0=0;MQRankSum=-0.524;QD=41.89;ReadPosRankSum=0.174;VQSLOD=3.0481;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.22:0,81,1019	0/0:14,0:14:39.08:0,39,475	0/0:25,0:25:72.15:0,72,802	0/0:27,0:27:75.13:0,75,823	0/0:28,0:28:84.22:0,84,1036	0/0:27,0:27:81.26:0,81,1051	0/0:21,0:21:63.19:0,63,803	1/1:0,34:34:99:1464,102,0	0/0:25,0:25:69.20:0,69,867	0/0:40,0:40:99:0,117,1465	0/0:25,0:25:75.23:0,75,958	0/0:30,0:30:90.28:0,90,1154	1/1:1,30:31:87.29:1304,87,0	1/1:5,29:34:87.94:1362,88,0	0/0:34,0:34:96.27:0,96,1204	0/0:33,0:32:93.29:0,93,1192	0/0:26,0:26:72.19:0,72,901	0/0:12,0:12:33.05:0,33,380	0/0:20,0:20:57.18:0,57,739	0/0:42,0:42:99:0,123,1572	0/0:26,0:26:75.21:0,75,942	1/1:0,35:35:99:1483,99,0	0/0:21,0:21:60.16:0,60,747	0/0:23,0:23:63.20:0,63,818	0/0:24,0:24:66.16:0,66,799	0/0:34,0:34:99:0,99,1247	0/0:27,0:27:78.24:0,78,998	0/0:4,0:4:12.04:0,12,156
chr10	81787473	.	CAA	C	3900.13	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.390;DP=736;FS=4.386;HRun=4;HaplotypeScore=96.0186;InbreedingCoeff=0.9891;MQ=89.44;MQ0=0;MQRankSum=-3.018;QD=41.05;ReadPosRankSum=4.112;VQSLOD=2.7514;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.24:0,72,1311	0/0:15,0:15:42.14:0,42,771	0/0:28,0:28:84.18:0,84,1349	0/0:27,0:27:72.61:0,73,1199	0/0:26,0:26:72.23:0,72,1290	0/0:27,0:27:81.27:0,81,1484	0/0:28,0:28:84.28:0,84,1526	0/0:34,0:34:96.31:0,96,1716	0/0:22,0:22:66.20:0,66,1167	0/0:19,0:18:54.17:0,54,957	0/0:20,0:20:59.83:0,60,1041	0/0:28,0:28:81.26:0,81,1439	1/1:5,33:38:99:1604,111,0	1/1:1,33:34:93.31:1369,93,0	0/0:44,0:44:99:0,132,2424	0/0:41,0:41:99:0,117,2130	0/0:18,0:18:48.16:0,48,899	0/0:12,0:12:36.12:0,36,666	0/0:20,0:20:57.17:0,57,1005	0/0:23,0:23:66.21:0,66,1173	0/0:21,0:21:60.21:0,60,1118	1/1:1,22:23:63.21:928,63,0	0/0:29,0:29:81.27:0,81,1476	0/0:39,0:39:99:0,117,2113	0/0:26,0:26:75.25:0,75,1369	0/0:33,0:33:99:0,99,1789	0/0:31,0:31:93.30:0,93,1666	0/0:5,0:5:12.04:0,12,225
chr10	81787902	.	A	AC	2333.96	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.016;DP=659;FS=9.551;HRun=5;HaplotypeScore=71.1132;InbreedingCoeff=0.9997;MQ=88.34;MQ0=0;MQRankSum=-1.952;QD=31.12;ReadPosRankSum=1.767;VQSLOD=4.0627;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,1183	0/0:14,0:14:39.10:0,39,419	0/0:21,0:21:60.13:0,60,636	0/0:25,0:25:64.59:0,65,645	0/0:28,0:28:81.20:0,81,867	0/0:22,0:22:63.16:0,63,676	0/0:23,0:23:60.15:0,60,642	0/0:20,0:20:45.11:0,45,484	0/0:33,0:33:96.24:0,96,1031	0/0:16,0:16:48.12:0,48,514	0/0:12,0:12:36.09:0,36,386	0/0:23,0:23:66.16:0,66,705	1/1:3,25:28:66.08:859,66,0	1/1:1,32:33:90.29:1184,90,0	0/0:22,0:22:66.10:0,66,695	0/0:29,0:29:87.20:0,87,927	0/0:27,0:27:81.18:0,81,860	0/0:31,0:31:93.13:0,93,957	0/0:15,0:15:45.10:0,45,475	0/0:15,0:15:39.09:0,39,419	0/0:42,0:42:99:0,114,1224	1/1:0,14:14:33.11:434,33,0	0/0:13,0:13:36.07:0,36,379	0/0:33,0:33:99:0,99,1055	0/0:18,0:18:48.12:0,48,515	0/0:20,0:20:57.14:0,57,611	0/0:28,0:28:81.20:0,81,869	0/0:14,0:14:42.11:0,42,451
chr10	81788128	.	CT	C	2599.93	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.283;DP=682;FS=22.110;HRun=1;HaplotypeScore=66.6131;InbreedingCoeff=0.9989;MQ=84.55;MQ0=2;MQRankSum=-0.832;QD=32.91;ReadPosRankSum=-0.580;VQSLOD=1.7821;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:82.93:0,83,1257	0/0:9,0:9:27.08:0,27,387	0/0:29,0:27:80.88:0,81,1071	0/0:26,0:26:68.86:0,69,964	0/0:24,0:24:66.22:0,66,1011	0/0:36,0:36:99:0,108,1639	0/0:25,0:25:75.25:0,75,1134	0/0:44,0:44:99:0,123,1820	0/0:18,0:18:54.15:0,54,792	0/0:21,0:21:60.20:0,60,936	0/0:19,0:19:57.19:0,57,891	0/0:24,0:24:72.24:0,72,1103	1/1:0,23:22:57.19:783,57,0	1/1:8,22:28:84.21:1079,84,0	0/0:25,0:25:75.26:0,75,1172	0/0:28,0:28:84.28:0,84,1301	0/0:17,0:17:51.15:0,51,772	0/0:20,0:20:57.19:0,57,886	0/0:26,0:26:78.21:0,78,1082	0/0:29,0:29:87.29:0,87,1311	0/0:31,0:31:90.13:0,90,1335	1/1:1,25:25:63.20:881,63,0	0/0:17,0:17:51.17:0,51,758	0/0:21,0:21:60.20:0,60,937	0/0:22,0:21:66.20:0,66,973	0/0:19,0:19:57.19:0,57,840	0/0:34,0:34:99:0,102,1570	0/0:9,0:9:24.08:0,24,375
chr10	81788278	.	GA	G	1261.40	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.809;DP=584;FS=0.554;HRun=7;HaplotypeScore=58.3370;InbreedingCoeff=0.9942;MQ=80.93;MQ0=0;MQRankSum=-4.589;QD=26.28;ReadPosRankSum=1.146;VQSLOD=4.2708;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.09:0,87,1056	0/0:6,0:6:18.06:0,18,226	0/0:27,0:27:66.19:0,66,784	0/0:20,0:20:48.07:0,48,581	0/0:30,0:30:84.27:0,84,1056	0/0:34,0:33:93.30:0,93,1170	0/0:18,0:18:51.16:0,51,642	0/0:34,0:34:96.28:0,96,1174	0/0:17,0:17:48.15:0,48,603	0/0:25,0:25:72.22:0,72,895	0/0:18,0:18:54.17:0,54,679	0/0:16,0:16:45.08:0,45,544	1/1:3,14:17:48.08:480,48,0	1/1:5,11:16:48.05:466,48,0	0/0:21,0:21:63.19:0,63,781	0/0:20,0:20:57.16:0,57,693	0/0:17,0:17:48.12:0,48,575	0/0:19,0:19:45.14:0,45,566	0/0:28,0:28:69.20:0,69,844	0/0:26,0:26:63.03:0,63,865	0/0:19,0:19:45.12:0,45,551	1/1:2,13:15:45.10:458,45,0	0/0:23,0:23:66.21:0,66,830	0/0:15,0:15:45.13:0,45,552	0/0:23,0:23:63.20:0,63,792	0/0:18,0:18:54.17:0,54,679	0/0:26,0:26:78.22:0,78,955	0/0:6,0:6:18.06:0,18,225
chr10	81788335	.	TG	T	1514.79	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.525;DP=608;FS=4.067;HRun=6;HaplotypeScore=63.1816;InbreedingCoeff=0.9987;MQ=79.69;MQ0=1;MQRankSum=-0.803;QD=27.05;ReadPosRankSum=1.810;VQSLOD=4.3292;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,1585	0/0:8,0:8:24.08:0,24,316	0/0:27,0:25:59.66:0,60,773	0/0:31,0:32:49.19:0,49,871	0/0:25,0:25:66.21:0,66,856	0/0:26,0:26:72.22:0,72,931	0/0:16,0:16:42.12:0,42,538	0/0:28,0:28:66.18:0,66,815	0/0:18,0:18:51.17:0,51,671	0/0:32,0:32:81.25:0,81,1042	0/0:25,0:25:66.21:0,66,867	0/0:16,0:16:42.13:0,42,538	1/1:0,15:15:39.10:419,39,0	1/1:1,20:21:60.14:637,60,0	0/0:22,0:22:60.18:0,60,774	0/0:14,0:14:39.12:0,39,498	0/0:16,0:16:45.14:0,45,574	0/0:20,0:20:28.94:0,29,698	0/0:20,0:20:57.14:0,57,715	0/0:30,0:30:90.28:0,90,1167	0/0:11,0:11:30.08:0,30,378	1/1:1,19:20:57.12:602,57,0	0/0:21,0:21:63.20:0,63,826	0/0:22,0:22:66.20:0,66,853	0/0:19,0:19:57.15:0,57,719	0/0:24,0:24:52.25:0,52,789	0/0:24,0:24:60.67:0,61,790	0/0:13,0:13:39.11:0,39,498
chr10	81789118	.	AAC	A	7328.32	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=3.823;DP=579;FS=8.584;HRun=0;HaplotypeScore=103.4938;InbreedingCoeff=0.8442;MQ=65.60;MQ0=10;MQRankSum=2.035;QD=16.00;ReadPosRankSum=6.013;VQSLOD=3.6983;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,14:24:36.11:422,36,0	0/0:8,0:7:15.94:0,16,235	1/1:27,0:7:2.80:13,3,0	0/1:18,0:11:1.26:1,0,100	1/1:6,0:27:43.08:211,43,0	1/1:2,0:22:39.77:195,40,0	0/0:21,0:21:42.12:0,42,632	0/0:43,0:43:78.22:0,78,1180	1/1:9,0:20:22.73:112,23,0	1/1:6,20:29:68.67:725,69,0	1/1:5,22:29:61.05:714,61,0	1/1:4,0:21:28.41:140,28,0	0/0:16,0:21:8.31:0,8,125	0/0:8,0:17:29.07:0,29,291	1/1:5,15:21:44.80:485,45,0	1/1:8,10:19:32.40:320,32,0	1/1:3,6:9:18.05:211,18,0	1/1:5,16:21:18:477,18,0	1/1:6,5:11:20.88:216,21,0	1/1:4,32:36:78.19:899,78,0	1/1:3,17:20:33.10:387,33,0	0/0:6,0:11:7.47:0,7,41	1/1:3,0:20:34.09:168,34,0	1/1:2,0:14:14.20:70,14,0	1/1:7,19:25:45.13:528,45,0	1/1:4,17:22:53.97:598,54,0	1/1:6,11:18:35.94:401,36,0	1/1:1,1:2:3.01:35,3,0
chr10	81789164	.	GAT	G	361.53	PASS	AB=0.977;AC=12;AF=0.214;AN=56;BaseQRankSum=1.210;DP=562;FS=2.109;HRun=0;HaplotypeScore=118.7641;InbreedingCoeff=0.4377;MQ=67.85;MQ0=1;MQRankSum=1.476;QD=2.68;ReadPosRankSum=0.542;VQSLOD=2.5596;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:39.13:0,39,630	0/1:8,1:9:13.79:14,0,299	0/1:10,0:5:0:1,0,0	0/1:11,0:8:5.21:5,0,15	0/0:32,1:33:46.38:0,46,1222	0/0:31,0:31:75.22:0,75,1183	0/1:13,0:13:13.78:14,0,322	0/1:30,0:30:99:129,0,299	0/0:18,0:18:45.15:0,45,741	0/0:36,0:36:96.31:0,96,1525	0/0:37,0:37:93.26:0,93,1446	0/0:18,0:18:36.12:0,36,593	1/1:15,0:15:28.78:161,29,0	1/1:16,0:16:25.71:135,26,0	0/0:22,0:21:60.18:0,60,947	0/0:14,0:14:11.30:0,11,473	0/0:15,0:15:42.09:0,42,662	0/0:23,0:23:60.03:0,60,852	0/0:21,0:21:41.87:0,42,482	0/0:35,1:36:40.04:0,40,1081	0/0:11,0:11:24.02:0,24,319	1/1:7,0:7:9.52:52,10,0	0/1:23,1:24:9.41:9,0,808	0/0:11,0:11:18.03:0,18,247	0/0:32,0:32:60.42:0,60,1241	0/0:25,0:25:69.16:0,69,1067	0/0:25,1:25:32.26:0,32,1036	0/0:3,0:3:9.02:0,9,125
chr10	81789799	.	GATAT	G	7583.66	PASS	AB=0.577;AC=45;AF=0.833;AN=54;BaseQRankSum=-0.815;DP=348;FS=0.000;HRun=0;HaplotypeScore=77.8858;InbreedingCoeff=0.6393;MQ=79.38;MQ0=1;MQRankSum=-3.342;QD=25.19;ReadPosRankSum=3.672;VQSLOD=4.0696;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:19:17.69:236,18,0	0/0:2,0:3:5.81:0,6,87	0/0:12,0:10:5.43:0,5,98	0/0:20,0:13:15.94:0,16,163	1/1:5,6:11:18.05:240,18,0	1/1:5,15:21:42.14:689,42,0	0/0:10,0:11:23.87:0,24,508	1/1:12,17:30:54.16:848,54,0	1/1:3,1:4:3.01:51,3,0	1/1:2,7:9:18.06:294,18,0	1/1:8,6:15:15.05:238,15,0	1/1:2,2:4:6.02:102,6,0	1/1:2,6:8:15.05:241,15,0	1/1:1,3:4:12.04:204,12,0	1/1:2,9:11:15.05:255,15,0	1/1:1,8:9:18.06:305,18,0	1/1:6,20:26:39.13:661,39,0	1/1:7,8:15:24.08:394,24,0	1/1:4,10:15:33.10:506,33,0	1/1:11,8:19:9.03:153,9,0	1/1:3,8:11:15.05:254,15,0	1/1:3,0:3:3.01:44,3,0	1/1:5,3:8:6.02:100,6,0	./.	1/1:2,13:16:30.10:485,30,0	0/1:4,11:15:37.65:493,0,38	1/1:7,15:23:36.59:588,37,0	1/1:1,4:5:12.04:204,12,0
chr10	81791490	.	A	AG	1498.35	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.942;DP=712;FS=0.522;HRun=0;HaplotypeScore=92.7832;InbreedingCoeff=0.9941;MQ=86.69;MQ0=0;MQRankSum=-10.989;QD=27.24;ReadPosRankSum=2.043;VQSLOD=3.8258;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1449	0/0:12,0:12:36.12:0,36,503	0/0:30,0:30:90.28:0,90,1201	0/0:21,0:21:59.34:0,59,747	0/0:38,0:38:99:0,111,1533	0/0:27,0:27:78.24:0,78,1065	0/0:16,0:16:48.16:0,48,671	0/0:32,0:32:96.30:0,96,1299	0/0:16,0:16:48.15:0,48,654	0/0:30,0:30:90.29:0,90,1241	0/0:26,0:26:75.25:0,75,1047	0/0:33,0:33:99:0,99,1384	1/1:4,19:23:66.11:666,66,0	1/1:2,20:22:63.15:669,63,0	0/0:28,0:27:80.86:0,81,1099	0/0:33,0:33:96.32:0,96,1343	0/0:24,0:24:69.23:0,69,965	0/0:17,0:17:48.14:0,48,649	0/0:29,0:29:87.25:0,87,1165	0/0:35,0:35:99:0,105,1467	0/0:33,0:33:96.32:0,96,1343	1/1:1,9:10:30.06:306,30,0	0/0:29,0:29:87.29:0,87,1216	0/0:20,0:20:57.19:0,57,795	0/0:18,0:18:48.16:0,48,671	0/0:32,0:32:96.32:0,96,1342	0/0:37,0:37:99:0,108,1509	0/0:5,0:5:15.05:0,15,210
chr10	81791492	.	A	ATTCCCTC	6591.15	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.094;DP=721;FS=0.000;HRun=0;HaplotypeScore=172.7533;InbreedingCoeff=0.9942;MQ=86.54;MQ0=0;MQRankSum=-12.801;QD=95.52;ReadPosRankSum=1.287;VQSLOD=5.8752;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,2801	0/0:14,0:14:39.09:0,39,948	0/0:31,0:31:90.26:0,90,2263	0/0:21,0:21:60.19:0,60,1531	0/0:38,0:38:99:0,111,2955	0/0:27,0:27:81.25:0,81,2060	0/0:16,0:16:48.16:0,48,1303	0/0:31,0:31:90.30:0,90,2403	0/0:16,0:16:48.16:0,48,1307	0/0:30,0:30:90.31:0,90,2480	0/0:26,0:26:75.24:0,75,2025	0/0:33,0:33:99:0,99,2763	1/1:10,19:29:84.23:2773,84,0	1/1:7,20:27:81.22:2733,81,0	0/0:26,0:25:78.22:0,78,2002	0/0:34,0:34:99:0,102,2733	0/0:24,0:24:72.22:0,72,1935	0/0:16,0:16:45.13:0,45,1144	0/0:25,0:25:75.24:0,75,1939	0/0:35,0:35:99:0,102,2811	0/0:33,0:33:99:0,99,2706	1/1:4,9:13:30.10:1085,30,0	0/0:29,0:29:87.30:0,87,2421	0/0:19,0:19:54.19:0,54,1493	0/0:19,0:19:54.16:0,54,1381	0/0:32,0:32:93.32:0,93,2600	0/0:37,0:37:99:0,108,2930	0/0:5,0:5:15.05:0,15,419
chr10	81792434	.	A	AT	581.16	PASS	AB=0.781;AC=10;AF=0.179;AN=56;BaseQRankSum=-1.616;DP=484;FS=12.834;HRun=14;HaplotypeScore=55.4788;InbreedingCoeff=0.0601;MQ=78.53;MQ0=5;MQRankSum=-0.268;QD=3.95;ReadPosRankSum=-2.084;VQSLOD=-0.6036;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,1:17:3.18:0,3,134	0/0:7,0:7:20.66:0,21,133	0/0:35,0:20:1.58:0,2,43	0/1:17,0:14:5.57:6,0,23	0/0:17,0:21:35.57:0,36,209	0/0:22,2:27:9.63:0,10,290	0/1:6,8:15:21.38:109,0,21	0/1:8,9:17:5.51:200,0,6	0/0:14,0:15:11.40:0,11,175	0/0:18,0:22:37.79:0,38,216	0/0:17,0:18:9.54:0,10,188	0/0:11,0:12:20.80:0,21,116	1/1:4,2:8:1.45:112,1,0	0/1:9,13:22:27.37:155,0,27	0/0:15,0:17:34.31:0,34,209	0/0:17,0:19:45.39:0,45,281	0/0:16,0:16:29.53:0,30,192	0/1:21,1:22:0.75:1,0,213	0/0:20,0:21:39.87:0,40,250	0/1:16,2:18:20.33:20,0,135	0/0:9,0:9:14.63:0,15,91	0/1:2,7:10:1.43:102,0,1	0/0:15,1:16:9.10:0,9,184	0/0:12,0:13:22.59:0,23,139	0/0:20,0:21:37.26:0,37,236	0/1:14,1:18:3.93:4,0,161	0/0:21,0:22:51.18:0,51,310	0/0:6,0:6:14.67:0,15,91
chr10	81792942	.	GC	G	7251.33	PASS	AB=0.786;AC=54;AF=0.964;AN=56;BaseQRankSum=2.001;DP=534;FS=0.799;HRun=2;HaplotypeScore=222.3163;InbreedingCoeff=-0.0474;MQ=68.73;MQ0=0;MQRankSum=-5.300;QD=13.58;ReadPosRankSum=2.245;VQSLOD=4.4487;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,11:26:47.78:305,48,0	1/1:1,7:8:21.94:126,22,0	0/1:5,5:10:63.98:153,0,64	0/1:17,2:19:79.66:80,0,191	1/1:9,20:29:51.37:360,51,0	1/1:9,18:27:69.71:347,70,0	1/1:7,9:16:40.89:247,41,0	1/1:11,24:35:88.01:639,88,0	1/1:5,12:17:44.69:203,45,0	1/1:5,11:16:45.23:273,45,0	1/1:2,19:21:39.04:194,39,0	1/1:8,16:24:56.93:225,57,0	1/1:7,16:23:56.50:295,56,0	1/1:4,19:23:54.93:271,55,0	1/1:5,20:25:61.05:327,61,0	1/1:4,22:26:65.38:330,65,0	1/1:7,9:16:43.73:226,44,0	1/1:3,1:4:11.56:74,12,0	1/1:9,16:25:67.74:508,68,0	1/1:6,21:27:66.94:352,67,0	1/1:9,8:17:30.49:187,30,0	1/1:1,8:9:1.32:89,1,0	1/1:4,11:15:37.75:188,38,0	1/1:5,6:11:25.16:143,25,0	1/1:7,15:22:55.39:324,55,0	1/1:7,9:16:45.07:350,45,0	1/1:7,15:22:58.14:348,58,0	1/1:1,4:5:14.39:86,14,0
chr10	81792946	.	G	GC	9711.10	PASS	AB=0.843;AC=54;AF=0.964;AN=56;BaseQRankSum=2.364;DP=549;FS=4.167;HRun=1;HaplotypeScore=233.3395;InbreedingCoeff=-0.0450;MQ=69.13;MQ0=0;MQRankSum=-6.634;QD=17.69;ReadPosRankSum=2.191;VQSLOD=4.9099;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,10:24:48.79:311,49,0	1/1:1,7:8:23.53:173,24,0	0/1:7,4:11:73.34:167,0,73	0/1:18,1:20:86.56:87,0,255	1/1:10,20:30:59.42:444,59,0	1/1:10,18:28:76.04:500,76,0	1/1:6,9:15:43.95:327,44,0	1/1:19,22:41:98.62:839,99,0	1/1:7,12:19:55.42:344,55,0	1/1:7,11:18:53.38:455,53,0	1/1:2,19:21:52.85:312,53,0	1/1:12,16:28:72.69:415,73,0	1/1:8,16:24:62.41:383,62,0	1/1:3,18:22:56.94:365,57,0	1/1:8,20:28:68.89:461,69,0	1/1:5,22:27:76.40:512,76,0	1/1:7,9:16:46.92:315,47,0	1/1:4,1:5:14.88:118,15,0	1/1:8,15:23:65.79:553,66,0	1/1:7,21:28:75.23:506,75,0	1/1:6,8:14:32:199,32,0	1/1:1,8:9:2.91:135,3,0	1/1:4,11:15:43.15:274,43,0	1/1:4,6:10:25.65:151,26,0	1/1:6,15:21:61.15:446,61,0	1/1:9,8:17:45.27:416,45,0	1/1:8,14:22:55.82:387,56,0	1/1:1,4:5:14.88:116,15,0
chr10	81792982	.	C	CA	15129.94	PASS	AB=0.769;AC=55;AF=0.982;AN=56;BaseQRankSum=0.649;DP=515;FS=16.839;HRun=2;HaplotypeScore=250.5586;InbreedingCoeff=-0.0245;MQ=60.35;MQ0=0;MQRankSum=-3.677;QD=29.38;ReadPosRankSum=1.925;VQSLOD=0.9026;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,20:25:57.15:673,57,0	1/1:2,6:8:15.05:197,15,0	1/1:6,6:12:6.10:291,6,0	0/1:7,3:10:33.90:180,0,34	1/1:5,24:29:63.09:653,63,0	1/1:2,20:22:63.14:706,63,0	1/1:0,8:8:24.07:289,24,0	1/1:10,25:35:93.19:1190,93,0	1/1:3,13:16:36.07:417,36,0	1/1:3,13:16:45.11:572,45,0	1/1:2,24:26:66.02:661,66,0	1/1:6,26:32:87.12:986,87,0	1/1:2,25:27:75.11:849,75,0	1/1:4,16:20:45.11:506,45,0	1/1:3,25:28:78.14:864,78,0	1/1:3,25:28:74.90:847,75,0	1/1:2,12:14:36.06:421,36,0	1/1:1,5:6:15.01:186,15,0	1/1:1,11:12:36.03:445,36,0	1/1:4,22:26:72.07:762,72,0	1/1:1,6:7:15:168,15,0	1/1:2,9:11:27.03:308,27,0	1/1:3,15:18:48.07:503,48,0	1/1:1,7:8:15:166,15,0	1/1:1,20:21:57.11:609,57,0	1/1:4,19:23:63.13:777,63,0	1/1:3,18:21:57.12:669,57,0	1/1:0,6:6:18.06:236,18,0
chr10	81796437	.	C	CA	737.08	PASS	AB=0.930;AC=5;AF=0.089;AN=56;BaseQRankSum=-6.573;DP=474;FS=0.000;HRun=9;HaplotypeScore=48.6889;InbreedingCoeff=0.3769;MQ=75.75;MQ0=2;MQRankSum=1.221;QD=10.84;ReadPosRankSum=-4.115;VQSLOD=1.1815;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:26.98:0,27,234	0/0:12,0:12:35.97:0,36,308	0/0:22,0:13:31.99:0,32,249	0/1:11,1:11:19.51:29,0,20	0/0:23,1:24:23.77:0,24,435	0/0:22,1:23:29.81:0,30,488	0/0:19,0:19:44.97:0,45,391	1/1:7,24:31:72.18:786,72,0	0/0:18,0:18:50.97:0,51,439	0/0:20,0:20:44.96:0,45,388	0/0:14,0:14:41.99:0,42,364	0/0:14,0:14:35.99:0,36,312	0/0:12,0:12:29.98:0,30,257	0/0:13,0:13:29.99:0,30,260	0/0:21,1:23:28.82:0,29,464	0/0:10,0:10:26.99:0,27,234	0/0:13,0:13:29.98:0,30,260	0/1:11,2:13:36.60:37,0,171	0/0:10,0:10:23.98:0,24,208	0/0:27,0:27:68.96:0,69,599	0/0:7,0:7:21:0,21,182	0/1:12,0:12:3.13:3,0,204	0/0:21,0:21:56.96:0,57,490	0/0:20,0:20:44.95:0,45,387	0/0:16,0:16:44.97:0,45,388	0/0:24,0:24:59.97:0,60,517	0/0:20,0:18:53.94:0,54,462	0/0:12,0:12:29.83:0,30,260
chr10	81800425	.	G	GT	1913.84	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.260;DP=519;FS=5.951;HRun=6;HaplotypeScore=78.5145;InbreedingCoeff=0.9950;MQ=77.46;MQ0=0;MQRankSum=-4.097;QD=32.44;ReadPosRankSum=-1.196;VQSLOD=3.3050;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.10:0,63,627	0/0:15,0:15:42.09:0,42,428	0/0:17,0:15:22.45:0,22,235	0/0:18,0:18:26.26:0,26,264	0/0:27,0:27:72.13:0,72,726	0/0:28,0:28:69.15:0,69,699	0/0:13,0:13:33.06:0,33,330	0/0:31,0:31:72.16:0,72,734	0/0:11,0:11:30.07:0,30,306	0/0:25,0:25:71.79:0,72,700	0/0:15,0:15:42.08:0,42,422	0/0:10,0:10:27.05:0,27,269	1/1:1,17:18:54.17:678,54,0	1/1:4,19:23:63.19:779,63,0	0/0:28,0:28:69.14:0,69,697	0/0:13,0:13:30.07:0,30,306	0/0:21,0:21:54.02:0,54,528	0/0:16,0:16:42.09:0,42,428	0/0:13,0:13:30.06:0,30,301	0/0:22,0:22:54.07:0,54,534	0/0:9,0:9:24.03:0,24,237	1/1:3,15:18:51.10:599,51,0	0/0:22,0:22:57.13:0,57,581	0/0:14,0:14:39.09:0,39,398	0/0:20,0:20:44.97:0,45,432	0/0:13,0:13:30.07:0,30,306	0/0:24,0:23:63.12:0,63,634	0/0:10,0:10:20.96:0,21,191
chr10	81800441	.	GT	G	4437.43	PASS	AB=0.584;AC=35;AF=0.625;AN=56;BaseQRankSum=-3.201;DP=508;FS=2.925;HRun=12;HaplotypeScore=73.4466;InbreedingCoeff=0.7448;MQ=72.02;MQ0=1;MQRankSum=-2.910;QD=13.33;ReadPosRankSum=2.677;VQSLOD=5.3584;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,13:18:8.38:248,8,0	0/0:10,1:11:3.81:0,4,214	0/0:15,0:15:7.51:0,8,128	0/0:18,0:12:20.65:0,21,168	1/1:4,22:26:47.76:371,48,0	0/0:5,0:33:71.18:0,71,373	0/1:3,12:16:19.89:220,0,20	0/0:13,0:33:70.18:0,70,412	0/0:2,0:10:22.83:0,23,118	1/1:5,15:20:44.80:346,45,0	1/1:2,16:18:41.81:324,42,0	0/0:2,0:11:25.72:0,26,140	1/1:2,0:19:32.59:94,33,0	1/1:8,0:17:20.93:60,21,0	1/1:5,21:27:26.25:372,26,0	0/1:4,8:12:36.98:115,0,37	1/1:4,15:20:13.43:277,13,0	1/1:3,14:18:31.91:238,32,0	0/1:5,9:15:1.49:156,0,1	1/1:6,15:22:16.37:300,16,0	1/1:1,9:10:26.89:209,27,0	1/1:1,0:15:28.52:83,29,0	0/0:8,0:23:43.09:0,43,253	0/0:5,0:19:45.95:0,46,277	1/1:1,18:20:46.87:354,47,0	1/1:1,9:10:26.85:204,27,0	1/1:5,19:24:25.39:370,25,0	1/1:1,4:5:11.95:93,12,0
chr10	81801131	.	AT	A	7505.05	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=9.692;DP=513;FS=6.024;HRun=9;HaplotypeScore=52.1400;InbreedingCoeff=0.9985;MQ=73.00;MQ0=0;MQRankSum=-0.298;QD=24.21;ReadPosRankSum=2.273;VQSLOD=5.7441;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:39.02:357,39,0	0/0:10,0:10:30.08:0,30,338	0/0:8,0:8:21.01:0,21,215	0/0:13,0:13:27.08:0,27,309	1/1:8,23:31:69.02:632,69,0	0/0:19,0:19:54.16:0,54,623	0/0:12,0:12:33.10:0,33,381	0/0:3,0:19:42.61:0,43,217	0/0:12,0:12:33.10:0,33,381	1/1:3,29:32:86.99:779,87,0	1/1:4,16:20:45.01:412,45,0	0/0:17,0:17:42.11:0,42,476	0/0:23,1:24:24.79:0,25,639	0/0:10,0:10:27.08:0,27,312	1/1:2,20:22:54.03:494,54,0	1/1:3,23:26:66.03:604,66,0	1/1:0,11:11:33.02:302,33,0	1/1:1,16:17:42.02:384,42,0	1/1:1,21:22:62.96:562,63,0	1/1:0,23:23:60.02:549,60,0	1/1:0,13:13:39.02:357,39,0	0/0:21,0:21:60.15:0,60,672	0/0:25,0:25:66.19:0,66,753	0/0:13,0:13:36.11:0,36,415	1/1:1,21:22:63.03:577,63,0	1/1:0,31:31:93.03:845,93,0	1/1:1,15:16:45.02:412,45,0	1/1:0,9:9:26.97:239,27,0
chr10	81801472	.	AT	A	1456.49	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.668;DP=490;FS=1.893;HRun=5;HaplotypeScore=53.0231;InbreedingCoeff=0.9683;MQ=66.92;MQ0=3;MQRankSum=2.503;QD=29.13;ReadPosRankSum=1.530;VQSLOD=3.9984;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.13:0,51,675	0/0:11,0:11:33.11:0,33,448	0/0:8,0:8:18.06:0,18,237	0/0:3,0:3:9.03:0,9,117	0/0:28,0:28:78.26:0,78,1052	0/0:21,0:21:63.20:0,63,846	0/0:6,0:6:18.06:0,18,246	0/0:33,0:33:87.27:0,87,1163	0/0:11,0:11:33.11:0,33,451	0/0:26,0:26:72.23:0,72,968	0/0:20,0:20:57.18:0,57,765	0/0:9,0:9:27.09:0,27,369	1/1:0,12:12:33.09:374,33,0	1/1:0,24:24:69.20:782,69,0	0/0:24,0:23:66.15:0,66,862	0/0:18,0:18:48.09:0,48,616	0/0:27,0:26:72.24:0,72,979	0/0:16,0:16:45.15:0,45,610	0/0:15,0:15:42.14:0,42,574	0/0:26,0:26:72.24:0,72,985	0/0:8,0:8:24.07:0,24,313	1/1:1,13:14:39.11:442,39,0	0/0:21,0:21:57.19:0,57,777	0/0:7,0:7:21.07:0,21,284	0/0:20,0:20:57.19:0,57,780	0/0:20,0:20:57.19:0,57,779	0/0:35,0:34:96.28:0,96,1293	0/0:8,0:8:17.73:0,18,246
chr10	81801555	.	AGAG	A	6841.55	PASS	AB=0.681;AC=38;AF=0.679;AN=56;BaseQRankSum=10.608;DP=541;FS=0.824;HRun=0;HaplotypeScore=247.4788;InbreedingCoeff=-0.0450;MQ=51.07;MQ0=11;MQRankSum=-3.490;QD=13.96;ReadPosRankSum=13.191;VQSLOD=2.3598;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,16:28:59.97:145,0,60	0/0:9,0:9:27.09:0,27,613	0/1:28,0:12:11.14:11,0,305	0/0:29,0:11:17.34:0,17,342	1/1:7,23:30:14.86:361,15,0	0/1:8,12:20:17.03:425,0,17	0/0:13,0:13:21.90:0,22,462	0/1:23,11:34:99:305,0,142	1/1:3,7:10:26.23:252,26,0	0/1:6,9:14:22.45:205,0,22	0/1:6,18:24:10.67:212,0,11	1/1:4,13:17:6.21:433,6,0	1/1:10,13:23:18.44:439,18,0	0/1:10,13:23:19.47:405,0,19	1/1:6,14:19:11.21:288,11,0	1/1:4,10:13:4.99:196,5,0	0/1:8,5:12:20.80:65,0,21	0/1:8,6:13:62.02:169,0,62	0/1:8,8:16:64.86:180,0,65	1/1:6,13:18:17.91:243,18,0	1/1:1,0:1:2.97:20,3,0	1/1:8,20:28:22.13:584,22,0	0/1:9,14:23:33.91:449,0,34	1/1:2,5:7:17.45:165,17,0	1/1:2,17:19:30.80:284,31,0	1/1:8,22:30:16.08:562,16,0	0/1:10,19:26:74.89:343,0,75	1/1:1,4:5:0.94:100,1,0
chr10	81801572	.	AGAGAGACAGAAAATTAC	A	25603.14	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=8.398;DP=590;FS=7.087;HRun=0;HaplotypeScore=369.2738;InbreedingCoeff=0.9711;MQ=57.25;MQ0=7;MQRankSum=-15.263;QD=84.78;ReadPosRankSum=-1.057;VQSLOD=3.3184;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,4:28:26.02:1195,26,0	0/0:10,0:10:30.10:0,30,1921	0/0:32,0:18:38.17:0,38,1445	0/0:30,0:16:38.34:0,38,1390	1/1:12,21:34:66.23:2504,66,0	0/0:23,0:23:69.24:0,69,4581	0/0:16,0:16:46.40:0,46,2843	0/0:36,0:36:99:0,102,5637	0/0:12,0:12:33.11:0,33,2123	1/1:16,4:19:54.18:2062,54,0	1/1:9,16:25:33.11:1479,33,0	0/0:18,0:18:54.19:0,54,3568	0/0:25,0:25:69.02:0,69,4228	0/0:22,0:22:63.22:0,63,4239	1/1:13,8:21:45.15:1883,45,0	1/1:8,7:14:36.09:1466,36,0	1/1:9,3:12:30.06:871,30,0	1/1:10,3:12:18.34:969,18,0	1/1:11,9:20:47.54:1632,48,0	1/1:12,14:25:45.15:1616,45,0	0/0:2,0:2:0.47:0,0,2	0/0:30,0:30:81.28:0,81,5209	0/0:26,0:26:78.27:0,78,4890	0/0:6,0:6:15.05:0,15,1160	1/1:8,13:21:54.14:2155,54,0	1/1:12,19:31:90.31:3424,90,0	1/1:14,15:28:87.25:3401,87,0	1/1:3,4:7:21.07:945,21,0
chr10	81801573	.	GA	G	1587.13	PASS	AB=0.801;AC=16;AF=0.286;AN=56;BaseQRankSum=13.857;DP=582;FS=1.727;HRun=1;HaplotypeScore=275.5476;InbreedingCoeff=-0.0166;MQ=57.66;MQ0=6;MQRankSum=-13.859;QD=5.36;ReadPosRankSum=5.436;VQSLOD=0.4774;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,11:27:39.84:77,0,40	0/0:10,0:10:30.10:0,30,471	0/0:30,0:17:19.90:0,20,489	0/0:30,0:16:41.25:0,41,572	1/1:28,5:33:10.81:88,11,0	0/0:23,0:23:69.24:0,69,1103	0/0:16,0:16:45.15:0,45,709	0/0:36,0:36:99:0,105,1562	0/0:12,0:12:33.11:0,33,527	0/1:14,6:19:89.37:209,0,89	0/1:18,6:24:8.37:62,0,8	0/0:18,0:18:54.18:0,54,863	0/0:25,0:25:69.02:0,69,1029	0/0:22,0:22:63.21:0,63,987	0/1:15,5:20:23.55:60,0,24	0/1:13,3:15:10.26:73,0,10	0/1:9,3:12:45.99:54,0,46	0/1:8,4:11:10.01:130,0,10	0/1:13,4:17:24.47:204,0,24	0/1:18,7:25:11.14:79,0,11	0/0:0,2:2:0:0,0,0	0/0:30,0:30:81.27:0,81,1272	0/0:26,0:26:78.26:0,78,1228	0/0:6,0:6:15.05:0,15,240	0/1:18,4:22:27.24:87,0,27	0/1:23,8:31:16.28:410,0,16	0/1:27,3:29:75.43:174,0,75	1/1:7,0:7:10.03:44,10,0
chr10	81801578	.	ACAG	A	4260.04	PASS	AB=0.900;AC=30;AF=0.536;AN=56;BaseQRankSum=15.773;DP=548;FS=6.272;HRun=0;HaplotypeScore=274.6701;InbreedingCoeff=0.8631;MQ=61.93;MQ0=4;MQRankSum=-15.238;QD=15.05;ReadPosRankSum=2.926;VQSLOD=3.3363;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,4:22:8.35:160,8,0	0/0:10,0:10:27.09:0,27,656	0/0:29,0:18:32.47:0,32,707	0/0:32,0:18:44.83:0,45,740	1/1:26,6:32:41.31:332,41,0	0/0:23,0:23:66.23:0,66,1602	0/0:16,0:16:44.24:0,44,1074	0/0:32,0:32:96.23:0,96,2155	0/0:11,0:11:30.10:0,30,700	1/1:13,6:19:17.62:302,18,0	1/1:21,1:22:32.74:247,33,0	0/0:18,0:18:54.19:0,54,1280	0/0:22,0:22:63.22:0,63,1478	0/0:21,0:21:63.22:0,63,1463	1/1:12,5:17:44.82:384,45,0	1/1:11,4:15:35.59:283,36,0	0/1:9,3:12:1.43:152,0,1	1/1:11,1:11:3.97:155,4,0	1/1:11,3:14:31.18:263,31,0	1/1:20,4:24:29.87:248,30,0	1/1:2,0:2:3.85:22,4,0	0/0:25,0:25:75.24:0,75,1738	0/0:26,0:26:78.27:0,78,1809	0/1:6,0:6:1.68:2,0,347	1/1:19,3:22:56.74:473,57,0	1/1:23,4:27:35.45:425,35,0	1/1:25,4:28:57.60:630,58,0	1/1:6,2:8:20.93:186,21,0
chr10	81801584	.	A	AG	38.07	PASS	AB=0.836;AC=7;AF=0.130;AN=54;BaseQRankSum=4.650;DP=481;FS=4.657;HRun=0;HaplotypeScore=249.1863;InbreedingCoeff=-0.1307;MQ=65.44;MQ0=2;MQRankSum=-5.380;QD=0.31;ReadPosRankSum=-3.060;VQSLOD=2.1603;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,4:11:8.88:0,9,32	0/0:11,0:11:33.10:0,33,446	0/0:26,0:19:22.72:0,23,467	0/0:26,0:17:17.87:0,18,283	0/1:21,6:27:12.14:12,0,57	0/0:22,0:22:66.21:0,66,905	0/0:16,0:16:48.15:0,48,655	0/0:31,0:31:90.27:0,90,1237	0/0:11,0:11:30.09:0,30,402	0/1:10,6:16:19.30:64,0,19	0/1:16,1:17:2.40:2,0,34	0/0:17,0:17:51.16:0,51,696	0/0:19,0:19:57.19:0,57,789	0/0:22,0:22:66.18:0,66,886	0/0:10,5:15:16.13:0,16,56	0/0:8,4:12:17.73:0,18,60	0/0:5,3:9:2.34:0,2,15	0/1:6,1:8:11.36:16,0,11	0/1:9,3:12:18.31:27,0,18	0/1:14,4:18:12.69:13,0,33	./.	0/0:23,0:23:69.23:0,69,964	0/0:26,0:26:75.24:0,75,1019	0/0:6,0:6:18.06:0,18,251	0/0:16,3:19:14.96:0,15,57	0/1:19,4:23:25.20:25,0,77	0/0:23,4:26:24.72:0,25,136	0/0:7,2:9:0.22:0,0,20
chr10	81801585	.	ATTAC	A	7348.04	PASS	AB=0.963;AC=29;AF=0.537;AN=54;BaseQRankSum=15.054;DP=477;FS=11.810;HRun=0;HaplotypeScore=249.9995;InbreedingCoeff=0.9541;MQ=65.61;MQ0=2;MQRankSum=-14.800;QD=29.39;ReadPosRankSum=1.163;VQSLOD=3.4796;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,4:11:27.92:302,28,0	0/0:11,0:11:33.11:0,33,907	0/0:23,0:19:41.79:0,42,902	0/1:23,0:16:1.27:1,0,500	1/1:21,6:27:64.40:691,64,0	0/0:22,0:22:66.23:0,66,1870	0/0:16,0:16:48.14:0,48,1326	0/0:30,0:30:87.30:0,87,2449	0/0:11,0:11:30.10:0,30,860	1/1:7,6:16:48.11:635,48,0	1/1:16,1:17:33.07:360,33,0	0/0:16,0:16:48.15:0,48,1290	0/0:19,0:19:57.20:0,57,1619	0/0:22,0:22:63.22:0,63,1810	1/1:8,5:15:45.11:540,45,0	1/1:7,4:12:36.09:422,36,0	1/1:4,3:9:24.01:321,24,0	1/1:6,1:9:26.75:350,27,0	1/1:9,3:12:33.10:467,33,0	1/1:14,4:18:42.11:507,42,0	./.	0/0:23,0:23:69.24:0,69,1997	0/0:26,0:26:78.22:0,78,2131	0/0:6,0:6:15.05:0,15,434	1/1:13,3:19:57.15:698,57,0	1/1:19,4:23:66.16:776,66,0	1/1:18,4:26:81.04:980,81,0	1/1:5,2:9:24.06:298,24,0
chr10	81801588	.	AC	A	3560.91	PASS	AB=0.962;AC=29;AF=0.537;AN=54;BaseQRankSum=15.924;DP=478;FS=10.078;HRun=1;HaplotypeScore=226.5535;InbreedingCoeff=0.9560;MQ=63.59;MQ0=2;MQRankSum=-14.726;QD=14.13;ReadPosRankSum=0.788;VQSLOD=2.2243;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,2:12:25.49:185,25,0	0/0:10,0:10:30.08:0,30,451	0/0:22,0:17:42.02:0,42,557	0/1:23,1:16:0.60:1,0,257	1/1:27,0:27:54.52:399,55,0	0/0:22,0:22:66.22:0,66,1042	0/0:15,0:15:45.15:0,45,713	0/0:31,0:31:87.25:0,87,1360	0/0:11,0:11:30.10:0,30,478	1/1:13,3:16:45.75:331,46,0	1/1:17,0:17:28.10:133,28,0	0/0:14,0:14:42.14:0,42,666	0/0:19,0:19:57.19:0,57,888	0/0:22,0:22:63.20:0,63,980	1/1:13,2:15:40.35:234,40,0	1/1:12,1:13:35.17:205,35,0	1/1:7,2:10:21.82:153,22,0	1/1:7,2:9:22.30:167,22,0	1/1:12,0:12:30.98:223,31,0	1/1:18,0:18:38.85:291,39,0	./.	0/0:24,0:24:72.23:0,72,1125	0/0:28,0:28:81.23:0,81,1253	0/0:6,0:6:15.05:0,15,239	1/1:16,3:19:52.27:330,52,0	1/1:23,0:23:58.70:322,59,0	1/1:20,7:27:71.88:442,72,0	1/1:7,2:9:21.98:148,22,0
chr10	81802078	.	C	CCTT	35346.67	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-11.082;DP=731;FS=6.993;HRun=0;HaplotypeScore=92.8347;InbreedingCoeff=0.9834;MQ=82.12;MQ0=0;MQRankSum=-8.317;QD=54.21;ReadPosRankSum=3.403;VQSLOD=7.2284;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,34:39:99:2018,99,0	0/0:10,0:10:24.08:0,24,399	0/0:24,0:24:65.57:0,66,1004	0/0:27,0:27:68.81:0,69,1088	1/1:1,25:26:72.11:1454,72,0	1/1:1,18:20:51.17:1155,51,0	0/0:18,0:18:48.16:0,48,797	1/1:7,28:35:84.29:1880,84,0	1/1:0,30:31:81.28:1775,81,0	1/1:2,17:20:51.17:1120,51,0	1/1:2,14:16:36.12:752,36,0	1/1:3,28:31:72.10:1630,72,0	1/1:3,29:32:75.26:1699,75,0	1/1:3,25:29:72.25:1574,72,0	1/1:4,38:42:99:2280,108,0	1/1:2,34:36:99:2192,99,0	1/1:5,19:26:57.11:1207,57,0	1/1:1,20:21:51.17:1127,51,0	1/1:3,19:24:69.18:1358,69,0	1/1:5,26:32:75.17:1481,75,0	1/1:2,25:27:63.17:1338,63,0	1/1:2,20:22:63.17:1287,63,0	1/1:0,18:19:54.14:1020,54,0	1/1:1,40:42:93.79:2109,94,0	1/1:1,20:22:60.16:1251,60,0	1/1:1,24:26:75.26:1674,75,0	1/1:1,30:31:84.24:1763,84,0	1/1:0,3:3:9.03:204,9,0
chr10	81802556	.	G	GA	4261.29	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-13.858;DP=703;FS=1.208;HRun=8;HaplotypeScore=66.2341;InbreedingCoeff=0.9753;MQ=74.30;MQ0=0;MQRankSum=-0.359;QD=27.67;ReadPosRankSum=-1.840;VQSLOD=4.7100;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:38:95.06:0,95,851	0/0:9,0:9:21:0,21,192	0/0:11,0:11:24.01:0,24,220	0/0:15,0:16:21.08:0,21,261	0/0:46,0:46:99:0,129,1181	1/1:2,27:29:69.21:796,69,0	0/0:18,0:18:51.03:0,51,467	1/1:2,22:24:63.17:715,63,0	1/1:7,22:29:60.18:692,60,0	0/0:29,0:30:83.07:0,83,745	0/0:28,0:28:72.03:0,72,659	1/1:3,12:16:38.95:430,39,0	0/0:27,0:27:72:0,72,650	0/0:23,0:23:63.03:0,63,577	0/0:32,0:32:93.05:0,93,851	0/0:32,1:33:49.39:0,49,697	0/0:28,0:28:81.04:0,81,741	0/0:15,0:15:45:0,45,405	0/0:20,0:20:45.01:0,45,412	0/0:41,0:41:99:0,108,988	0/0:2,0:2:6:0,6,55	0/0:33,0:33:82.86:0,83,746	1/1:2,30:32:84.14:969,84,0	1/1:4,20:24:57.17:658,57,0	0/0:35,0:35:87.04:0,87,796	0/0:27,0:27:69.03:0,69,632	0/0:30,0:30:75.03:0,75,686	0/0:7,0:7:18.01:0,18,165
chr10	81803890	.	C	CAGAG	11289.57	PASS	AB=0.575;AC=47;AF=0.839;AN=56;BaseQRankSum=-0.805;DP=598;FS=6.358;HRun=0;HaplotypeScore=125.9315;InbreedingCoeff=0.8253;MQ=63.49;MQ0=8;MQRankSum=-1.539;QD=22.85;ReadPosRankSum=4.184;VQSLOD=4.3355;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,29:38:32.98:721,33,0	0/0:6,0:6:15.05:0,15,261	0/0:27,0:16:20.19:0,20,349	0/0:46,0:28:43.99:0,44,574	1/1:12,9:22:36.11:793,36,0	1/1:5,0:17:19.53:88,20,0	0/0:25,0:25:51.03:0,51,859	1/1:30,0:30:56.99:268,57,0	1/1:3,0:18:25.18:114,25,0	1/1:14,4:17:32.65:666,33,0	1/1:7,11:18:39.10:856,39,0	1/1:4,0:18:27.93:126,28,0	1/1:7,0:19:25.01:113,25,0	1/1:10,0:21:35.91:160,36,0	1/1:25,15:35:36.11:784,36,0	1/1:11,7:16:30.01:642,30,0	1/1:3,27:28:27.09:685,27,0	1/1:5,18:23:39.13:943,39,0	1/1:5,3:8:18:317,18,0	1/1:12,7:19:41.70:944,42,0	1/1:8,3:10:12.04:305,12,0	1/1:8,0:18:22.55:109,23,0	1/1:4,0:21:33.52:152,34,0	0/1:6,0:23:57.82:80,0,58	1/1:11,0:12:21.07:406,21,0	1/1:1,14:16:42.12:921,42,0	1/1:14,10:25:44.91:944,45,0	1/1:0,2:2:6.02:152,6,0
chr10	81803894	.	GAGAGAGACAGAGAC	G	3007.11	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=-5.752;DP=605;FS=28.225;HRun=0;HaplotypeScore=223.5117;InbreedingCoeff=0.1794;MQ=61.74;MQ0=16;MQRankSum=-0.574;QD=9.22;ReadPosRankSum=-3.337;VQSLOD=0.9999;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:39:0.05:0,0,252	0/0:7,0:7:18.06:0,18,412	0/0:25,0:15:19.98:0,20,322	0/0:43,0:25:28.13:0,28,528	0/0:20,0:20:5.10:0,5,230	1/1:15,0:15:8:149,8,0	0/0:24,0:24:51.04:0,51,1464	1/1:6,26:31:74.99:1165,75,0	0/1:17,0:17:6.20:134,0,6	0/1:17,0:16:33.37:33,0,321	0/0:18,0:18:13.82:0,14,320	0/1:16,0:16:0.25:86,0,0	1/1:19,0:18:23.81:296,24,0	1/1:26,0:23:38.01:429,38,0	0/1:40,0:36:21.98:22,0,157	0/1:16,0:14:68.06:68,0,89	0/0:32,0:28:12.18:0,12,230	0/0:25,0:24:7.72:0,8,264	0/0:9,0:7:11.16:0,11,158	0/1:19,0:19:44.80:45,0,163	0/1:15,0:10:11.57:12,0,104	1/1:21,0:20:24:360,24,0	0/1:23,0:22:58.52:220,0,59	0/1:23,0:23:52.78:53,0,141	0/0:14,0:13:30.08:0,30,389	0/0:19,0:18:3.72:0,4,381	0/1:27,0:26:99:116,0,177	0/0:2,0:2:5.99:0,6,51
chr10	81803896	.	G	GAGAC	6798.79	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=5.241;DP=609;FS=19.600;HRun=0;HaplotypeScore=137.8644;InbreedingCoeff=0.1220;MQ=61.29;MQ0=19;MQRankSum=-0.842;QD=13.28;ReadPosRankSum=9.031;VQSLOD=2.3629;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:39:14.86:433,0,15	0/0:7,0:7:18.04:0,18,308	0/0:23,0:14:32.92:0,33,453	0/0:43,0:25:52.26:0,52,732	1/1:20,0:20:33.53:503,34,0	0/1:13,0:13:10.07:16,0,10	0/0:24,0:24:50.60:0,51,955	1/1:31,0:30:1.44:51,1,0	1/1:16,0:16:13.89:39,14,0	0/1:17,0:16:30.79:356,0,31	1/1:18,0:18:10.55:512,11,0	1/1:15,0:15:16.29:46,16,0	0/1:19,0:18:18.99:19,0,26	0/1:27,0:23:0.83:29,0,1	0/1:42,0:37:32.28:457,0,32	1/1:16,0:15:0.35:389,0,0	0/1:33,0:29:3.06:437,0,3	1/1:26,0:24:18.84:623,19,0	0/1:9,0:7:4.48:156,0,4	1/1:19,0:19:41.43:595,41,0	0/1:16,0:11:8.91:194,0,9	1/1:23,0:21:11.62:32,12,0	0/1:22,0:21:1.78:31,0,2	0/1:24,0:23:19.27:19,0,82	1/1:8,7:14:31.31:644,31,0	1/1:20,0:19:0.93:481,1,0	1/1:26,0:25:38.51:631,39,0	1/1:2,0:2:6.02:105,6,0
chr10	81803924	.	CAGAG	C	123.40	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=1.045;DP=572;FS=0.000;HRun=0;HaplotypeScore=128.2293;InbreedingCoeff=0.7117;MQ=45.78;MQ0=60;MQRankSum=-1.908;QD=2.74;ReadPosRankSum=-2.044;VQSLOD=2.0966;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:32:23.53:0,24,223	0/0:4,0:4:12.04:0,12,256	./.	0/0:13,0:5:5.50:0,5,37	0/0:24,0:21:32.66:0,33,270	0/0:9,0:8:6.02:0,6,89	0/0:27,0:24:42.13:0,42,805	0/0:30,0:26:18.14:0,18,207	0/0:9,0:9:21.06:0,21,353	0/0:23,0:18:47.82:0,48,603	0/0:20,0:19:35.67:0,36,308	0/0:12,0:11:24:0,24,349	0/0:11,6:12:1.16:0,1,3	1/1:12,11:19:14.95:150,15,0	0/0:41,0:28:19.74:0,20,162	0/0:13,0:11:11.76:0,12,74	0/0:34,0:24:34.49:0,34,257	0/0:22,0:18:9.23:0,9,141	0/0:15,0:10:18.01:0,18,192	0/0:20,0:19:21.15:0,21,133	0/0:24,0:13:14.52:0,15,134	1/1:14,8:15:6.01:80,6,0	0/0:19,0:15:24.55:0,25,433	0/0:21,0:17:24.08:0,24,452	0/0:26,0:23:27.20:0,27,221	0/0:24,0:19:40.34:0,40,438	0/0:25,0:23:13.60:0,14,186	0/0:12,0:9:15.22:0,15,101
chr10	81803994	.	CAGAG	C	5313.71	PASS	AB=0.731;AC=29;AF=0.518;AN=56;BaseQRankSum=1.684;DP=569;FS=0.000;HRun=0;HaplotypeScore=92.4487;InbreedingCoeff=0.2463;MQ=37.81;MQ0=102;MQRankSum=0.817;QD=11.31;ReadPosRankSum=3.391;VQSLOD=3.4961;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,12:23:27.07:446,27,0	0/0:4,0:3:9.02:0,9,154	0/0:3,0:1:2.68:0,3,11	0/0:8,0:4:3.01:0,3,65	1/1:25,10:20:5.94:110,6,0	0/0:13,0:11:24.01:0,24,514	0/0:13,0:7:18.06:0,18,385	0/1:2,8:8:51.58:290,0,52	0/0:17,0:15:29.84:0,30,628	0/1:20,15:19:99:536,0,265	1/1:12,11:17:18.06:320,18,0	0/0:10,0:8:18.04:0,18,412	1/1:7,15:17:9.12:474,9,0	1/1:8,25:25:36.12:661,36,0	1/1:16,21:21:15.05:276,15,0	1/1:6,14:15:21.07:367,21,0	0/1:17,5:12:29.31:99,0,29	0/1:11,4:8:99:150,0,111	0/1:14,6:8:67.53:200,0,68	1/1:12,5:11:4.11:88,4,0	0/1:17,6:11:18.94:49,0,19	1/1:6,13:11:18.06:331,18,0	0/0:13,0:9:15.05:0,15,340	0/0:18,0:13:27.09:0,27,653	0/1:13,13:21:10.90:188,0,11	0/1:24,13:16:99:470,0,209	1/1:17,10:23:9.02:165,9,0	0/1:8,4:8:60.90:93,0,61
chr10	81804004	.	CAGAG	C	607.81	PASS	AB=0.985;AC=28;AF=0.500;AN=56;BaseQRankSum=5.411;DP=557;FS=15.919;HRun=0;HaplotypeScore=118.2379;InbreedingCoeff=0.1570;MQ=47.55;MQ0=89;MQRankSum=0.062;QD=1.37;ReadPosRankSum=6.167;VQSLOD=0.8880;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,1:21:1.81:89,0,2	0/0:6,0:5:15.05:0,15,349	0/0:13,0:9:4.13:0,4,177	0/1:21,0:16:23.60:24,0,194	1/1:32,0:17:3.85:11,4,0	0/0:13,0:11:24.08:0,24,583	0/0:11,0:7:18.06:0,18,459	0/1:11,0:10:41.70:42,0,173	0/0:16,0:14:29.91:0,30,746	0/1:37,0:21:80.42:80,0,315	1/1:22,0:16:8.15:40,8,0	0/0:8,0:7:18.06:0,18,463	1/1:18,3:18:4.36:71,4,0	1/1:25,0:20:25.35:98,25,0	0/1:35,1:20:26.59:27,0,36	1/1:18,0:13:12.17:38,12,0	1/1:19,0:10:3.94:35,4,0	0/1:14,0:7:14.30:14,0,43	0/1:18,0:8:66.41:91,0,66	1/1:16,1:11:1.21:4,1,0	0/0:19,0:7:1.88:0,2,92	0/1:18,0:13:11.30:11,0,104	0/0:13,0:10:15.05:0,15,340	0/0:15,0:12:27.09:0,27,685	1/1:22,0:17:6.83:33,7,0	0/1:37,0:17:37.03:37,0,179	1/1:20,2:17:7.42:31,7,0	0/1:15,1:12:6.53:7,0,96
chr10	81804183	.	TGGGGGCAGGAAGATAA	T	1361.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.795;DP=419;FS=12.385;HRun=0;HaplotypeScore=181.7936;InbreedingCoeff=0.9694;MQ=76.04;MQ0=0;MQRankSum=-4.693;QD=97.25;ReadPosRankSum=0.018;VQSLOD=2.7966;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.15:0,45,3051	0/0:6,0:6:18.06:0,18,1220	0/0:23,0:23:51.13:0,51,2164	0/0:22,0:21:60.68:0,61,3528	0/0:9,0:9:27.09:0,27,2114	0/0:13,0:13:39.13:0,39,2755	0/0:16,0:16:48.16:0,48,3253	1/1:1,13:14:39.13:1456,39,0	0/0:19,0:19:57.20:0,57,3202	0/0:16,0:16:45.14:0,45,2976	0/0:8,0:8:24.08:0,24,1686	0/0:12,0:12:36.12:0,36,2413	0/0:14,0:14:42.14:0,42,2993	0/0:14,0:14:42.14:0,42,2758	0/0:14,0:14:39.13:0,39,2860	0/0:21,0:20:60.21:0,60,4334	0/0:23,0:22:69.24:0,69,4973	0/0:13,0:13:39.13:0,39,2753	0/0:19,0:19:57.18:0,57,3556	0/0:9,0:9:27.09:0,27,2140	0/0:22,0:22:66.22:0,66,4391	0/0:14,0:14:36.11:0,36,2355	0/0:13,0:13:39.13:0,39,2846	0/0:29,0:29:81.28:0,81,6160	0/0:8,0:8:24.08:0,24,1779	0/0:16,0:16:48.16:0,48,3247	0/0:5,0:5:15.05:0,15,1156	0/0:9,0:9:27.09:0,27,1977
chr10	81804968	.	T	TGG	3123.51	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=3.017;DP=519;FS=11.541;HRun=8;HaplotypeScore=104.5890;InbreedingCoeff=0.9083;MQ=79.55;MQ0=1;MQRankSum=-1.829;QD=6.97;ReadPosRankSum=2.812;VQSLOD=0.0019;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:39:72.36:249,72,0	0/0:9,0:9:24.06:0,24,268	0/0:17,0:16:19.59:0,20,202	0/0:28,0:24:29.64:0,30,363	1/1:6,0:22:34.69:120,35,0	1/1:16,0:22:24.03:249,24,0	0/0:16,0:16:36.07:0,36,401	1/1:10,0:27:31.66:118,32,0	1/1:5,1:16:26.99:250,27,0	1/1:2,0:10:19.84:68,20,0	1/1:3,0:21:13.13:138,13,0	1/1:14,0:15:12.02:132,12,0	1/1:2,0:29:57.39:198,57,0	1/1:3,0:19:34.81:120,35,0	1/1:3,0:21:9.49:104,9,0	1/1:2,0:22:12.08:114,12,0	1/1:3,0:20:39.47:134,39,0	1/1:3,0:23:37.15:128,37,0	1/1:3,0:16:32.44:112,32,0	1/1:1,0:10:22.33:77,22,0	1/1:4,3:18:28.99:212,29,0	1/1:3,0:12:19.69:68,20,0	1/1:2,4:6:6.02:77,6,0	1/1:5,1:17:21.04:205,21,0	1/1:2,0:12:22.46:77,22,0	1/1:5,0:16:25.58:104,26,0	1/1:0,0:28:49.91:172,50,0	1/1:1,1:5:8:65,8,0
chr10	81805362	.	A	ATTG	1571.02	PASS	AB=0.946;AC=31;AF=0.596;AN=52;BaseQRankSum=9.011;DP=366;FS=71.441;HRun=0;HaplotypeScore=95.7944;InbreedingCoeff=0.3901;MQ=76.66;MQ0=2;MQRankSum=-6.982;QD=6.52;ReadPosRankSum=-0.227;VQSLOD=-0.6315;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,13:23:16:45,0,16	0/0:6,0:6:18.05:0,18,262	0/0:25,0:21:60.14:0,60,927	0/0:28,0:20:39.02:0,39,633	1/1:7,0:7:14.84:106,15,0	0/1:20,0:20:40.32:40,0,302	0/1:19,0:18:41.39:41,0,335	0/0:29,0:29:14.86:0,15,931	0/1:17,0:17:10.24:10,0,235	1/1:9,0:9:13.56:240,14,0	1/1:7,0:6:14.92:113,15,0	0/0:14,0:14:35.35:0,35,333	0/1:10,0:10:24.38:24,0,36	0/1:12,0:12:16.25:16,0,214	1/1:3,10:13:12.04:206,12,0	1/1:16,0:16:30.78:257,31,0	1/1:12,0:12:2.24:44,2,0	1/1:9,0:9:6.32:65,6,0	1/1:16,0:15:17.87:155,18,0	./.	1/1:14,0:14:5.84:39,6,0	0/1:4,0:4:0.90:1,0,47	0/0:7,0:6:17.79:0,18,148	0/0:15,0:15:29.06:0,29,266	1/1:2,0:8:2.98:23,3,0	1/1:12,0:11:14.90:113,15,0	1/1:4,0:13:18.04:217,18,0	./.
chr10	81805365	.	A	ATTG	3688.76	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=2.684;DP=362;FS=9.966;HRun=0;HaplotypeScore=88.0950;InbreedingCoeff=0.5569;MQ=74.34;MQ0=2;MQRankSum=-2.255;QD=12.17;ReadPosRankSum=1.473;VQSLOD=2.3387;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:5.99:73,6,0	0/0:6,0:6:12.01:0,12,129	0/0:26,0:21:11.51:0,12,91	0/0:27,0:18:2.99:0,3,38	1/1:7,0:7:14.69:98,15,0	1/1:22,0:22:41.48:448,41,0	1/1:18,0:17:20.99:350,21,0	1/1:29,0:29:29.86:263,30,0	1/1:15,0:15:23.88:255,24,0	1/1:8,0:8:21:256,21,0	1/1:6,0:5:8.93:63,9,0	1/1:14,0:14:12.34:80,12,0	1/1:5,6:12:9.03:169,9,0	1/1:12,0:12:15.03:227,15,0	1/1:12,0:12:14.97:222,15,0	1/1:15,0:15:26.85:230,27,0	1/1:11,0:11:5.99:50,6,0	1/1:8,0:8:2.97:20,3,0	1/1:16,0:15:17.93:150,18,0	1/1:1,0:1:2.90:16,3,0	1/1:14,0:14:2.97:20,3,0	1/1:4,0:4:3.01:58,3,0	1/1:7,0:6:8.91:62,9,0	1/1:15,0:15:16.83:122,17,0	1/1:7,0:7:2.99:23,3,0	1/1:17,0:16:25.09:215,25,0	1/1:12,0:12:18.04:218,18,0	./.
chr10	81805402	.	TTGATGA	T	459.15	PASS	AB=0.901;AC=10;AF=0.192;AN=52;BaseQRankSum=-1.837;DP=342;FS=0.000;HRun=0;HaplotypeScore=105.1472;InbreedingCoeff=0.4971;MQ=37.68;MQ0=24;MQRankSum=-0.529;QD=7.53;ReadPosRankSum=0.735;VQSLOD=2.0992;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:19.18:0,19,282	0/0:4,0:4:9.02:0,9,226	0/0:40,0:10:21.06:0,21,415	0/0:33,0:9:20.96:0,21,341	0/0:11,0:11:18.05:0,18,207	0/1:16,1:17:29.78:136,0,30	0/0:12,0:11:18.06:0,18,434	0/0:22,0:22:34.50:0,35,538	0/1:10,2:12:13.64:55,0,14	0/0:15,0:14:34.37:0,34,536	0/0:4,0:3:0:0,0,0	1/1:9,2:11:6.49:130,6,0	0/0:15,0:15:17.89:0,18,424	0/0:10,0:10:27.09:0,27,588	0/0:7,0:7:9.71:0,10,172	0/0:15,0:15:22.27:0,22,301	0/0:8,0:8:2.99:0,3,23	./.	0/0:11,0:10:15.43:0,15,242	0/0:2,0:2:6.02:0,6,120	0/0:13,0:13:18.52:0,19,208	./.	1/1:4,2:5:3.01:64,3,0	1/1:14,0:14:11.63:200,12,0	0/0:5,0:5:3.01:0,3,36	0/0:15,0:12:15.52:0,16,284	0/0:14,0:14:24.07:0,24,523	1/1:1,0:1:2.68:11,3,0
chr10	81805408	.	A	AT	200.53	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=3.704;DP=322;FS=2.118;HRun=1;HaplotypeScore=88.8787;InbreedingCoeff=0.4983;MQ=36.99;MQ0=22;MQRankSum=-2.390;QD=5.57;ReadPosRankSum=0.923;VQSLOD=0.5310;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:27.07:0,27,330	0/0:3,0:3:9.03:0,9,117	0/0:37,0:10:26.95:0,27,322	0/0:32,0:8:23.62:0,24,251	0/0:10,0:10:23.80:0,24,260	1/1:13,6:19:28.09:233,28,0	0/0:13,0:12:24.04:0,24,284	0/0:19,0:19:48.46:0,48,538	1/1:5,3:8:2.92:73,3,0	0/0:15,0:14:42.04:0,42,492	0/0:4,0:3:8.83:0,9,58	0/0:13,0:13:1.33:0,1,12	0/0:15,0:15:24.05:0,24,285	0/0:10,0:10:30.09:0,30,375	0/0:5,0:5:14.98:0,15,145	0/0:15,0:15:38.61:0,39,377	0/0:9,0:9:2.86:0,3,17	0/1:9,0:9:0:0,0,0	0/0:10,0:9:23.99:0,24,270	0/0:2,0:2:6.02:0,6,78	0/0:13,0:13:23.94:0,24,285	0/0:2,0:2:3:0,3,28	0/0:2,1:3:2.92:0,3,8	0/0:10,2:12:4.04:0,4,10	0/0:4,0:4:5.99:0,6,60	0/0:13,0:10:20.99:0,21,238	0/0:13,0:13:24.03:0,24,279	0/0:1,0:1:3.01:0,3,38
chr10	81805425	.	A	AATG	1941.29	PASS	AB=1.000;AC=26;AF=0.542;AN=48;BaseQRankSum=-0.371;DP=264;FS=33.686;HRun=0;HaplotypeScore=72.5964;InbreedingCoeff=0.6894;MQ=49.30;MQ0=6;MQRankSum=2.215;QD=15.05;ReadPosRankSum=3.148;VQSLOD=1.2710;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:17.74:144,18,0	0/0:2,0:2:6.02:0,6,86	0/0:31,0:15:25.30:0,25,336	0/0:31,0:17:35.93:0,36,341	1/1:7,0:7:16.14:92,16,0	0/0:17,0:17:34.71:0,35,350	0/0:11,0:10:23.91:0,24,252	1/1:18,0:18:35.14:440,35,0	0/0:6,0:6:8.36:0,8,69	1/1:14,0:14:36.05:377,36,0	./.	0/0:9,0:9:17.01:0,17,167	0/1:9,0:9:7.68:8,0,19	0/1:10,0:10:7.78:35,0,8	1/1:5,0:5:6.02:68,6,0	1/1:10,0:10:18.47:174,18,0	./.	./.	1/1:10,0:9:15.04:189,15,0	1/1:2,0:2:5.23:41,5,0	1/1:10,0:10:17.93:155,18,0	./.	0/0:2,0:2:3.01:0,3,39	0/0:8,0:8:12.04:0,12,167	1/1:4,0:4:2.94:18,3,0	1/1:2,7:8:14.87:151,15,0	1/1:10,0:10:23.37:232,23,0	0/0:1,0:1:1.82:0,2,5
chr10	81806619	.	T	TACACACAC	3049.78	PASS	AB=0.984;AC=22;AF=0.393;AN=56;BaseQRankSum=-0.767;DP=616;FS=4.521;HRun=0;HaplotypeScore=198.2258;InbreedingCoeff=0.4357;MQ=62.60;MQ0=5;MQRankSum=-4.036;QD=9.71;ReadPosRankSum=-3.880;VQSLOD=1.7248;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:3.01:0,3,59	0/0:10,0:10:23.36:0,23,511	0/0:21,0:8:15:0,15,254	0/0:37,0:22:7.02:0,7,482	0/0:9,0:26:13.81:0,14,117	1/1:15,8:27:9.92:346,10,0	0/0:11,0:11:30.09:0,30,681	0/1:30,0:30:22:149,0,22	1/1:13,14:27:7.14:354,7,0	0/0:21,0:21:51.04:0,51,1193	0/0:4,0:21:10.35:0,10,122	1/1:7,10:19:8.98:257,9,0	1/1:18,0:18:28.30:764,28,0	1/1:23,0:25:26.10:586,26,0	0/0:26,0:28:44.10:0,44,570	0/0:8,0:32:7.78:0,8,199	0/0:4,0:25:14.54:0,15,122	0/0:11,0:9:21:0,21,340	0/1:17,0:17:4.77:5,0,214	0/1:14,0:15:5.23:5,0,12	0/1:18,0:18:34.50:34,0,81	1/1:16,0:19:10.23:402,10,0	1/1:9,13:25:2.50:106,3,0	1/1:8,5:13:2.64:125,3,0	0/0:20,0:20:28.27:0,28,401	0/1:30,0:30:86.91:87,0,441	0/1:26,0:27:12.39:12,0,69	0/0:15,0:15:42.01:0,42,606
chr10	81806631	.	C	CACAG	3713.48	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=-0.102;DP=636;FS=7.749;HRun=0;HaplotypeScore=177.6700;InbreedingCoeff=0.0491;MQ=57.06;MQ0=8;MQRankSum=-1.229;QD=7.02;ReadPosRankSum=4.043;VQSLOD=1.8526;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:2,17:21:2.22:0,2,7	0/0:11,0:11:29.93:0,30,388	0/0:20,0:8:7.74:0,8,63	0/0:27,0:13:19.78:0,20,174	0/1:30,0:29:34.58:41,0,35	0/1:24,0:24:6.98:25,0,7	0/0:15,0:15:38.95:0,39,443	1/1:31,0:30:58.12:443,58,0	0/1:22,0:22:9.96:74,0,10	0/1:26,0:26:23.49:23,0,316	0/1:26,0:26:14.26:14,0,36	0/1:18,0:18:23.21:45,0,23	1/1:21,0:17:27.16:214,27,0	0/1:27,0:26:12.84:156,0,13	0/1:34,0:34:33.07:331,0,33	1/1:29,1:29:23.61:333,24,0	0/1:26,0:24:19.77:88,0,20	0/1:13,0:11:58.48:58,0,85	1/1:18,0:18:25.79:291,26,0	1/1:6,13:20:6.88:109,7,0	1/1:16,0:16:2.34:144,2,0	1/1:18,0:18:11.05:145,11,0	0/1:29,0:29:3.76:4,0,53	0/0:12,0:12:3.85:0,4,18	0/1:24,0:24:74.94:148,0,75	1/1:9,19:31:27.54:575,28,0	1/1:7,20:30:5.39:246,5,0	1/1:15,0:15:11.35:206,11,0
chr10	81806662	.	AGAGG	A	2815.58	PASS	AB=0.995;AC=26;AF=0.464;AN=56;BaseQRankSum=-2.056;DP=653;FS=3.692;HRun=0;HaplotypeScore=164.6803;InbreedingCoeff=-0.6749;MQ=55.35;MQ0=11;MQRankSum=1.216;QD=4.63;ReadPosRankSum=-6.372;VQSLOD=0.5026;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:25:6.20:167,0,6	0/1:11,0:11:3.48:3,0,535	0/1:14,0:4:0.38:0,0,20	0/0:17,0:9:8.95:0,9,74	0/1:37,0:35:99:147,0,123	0/1:23,0:23:14.99:15,0,144	0/0:10,0:10:14.85:0,15,531	0/1:38,6:44:88.52:89,0,413	0/1:20,0:20:96.36:96,0,106	0/1:32,0:32:99:311,0,193	0/1:26,0:25:82.43:110,0,82	0/1:16,0:16:48.91:49,0,139	0/1:19,0:15:1.99:52,0,2	0/1:22,0:21:19.41:104,0,19	0/1:29,0:29:99:154,0,247	0/1:35,0:34:99:211,0,269	0/1:26,0:24:99:108,0,166	0/1:15,0:12:41.97:42,0,200	0/1:19,0:19:69.12:159,0,69	0/1:29,0:29:34.19:219,0,34	0/1:13,0:13:34.44:44,0,34	1/1:24,0:24:4.85:52,5,0	0/1:28,0:28:99:114,0,160	0/0:18,0:17:2.56:0,3,154	0/1:24,0:24:99:250,0,238	0/1:30,0:30:99:291,0,123	0/1:29,0:28:74.82:75,0,196	0/1:16,0:15:99:104,0,136
chr10	81806664	.	AGG	A	4129.27	PASS	AB=0.994;AC=32;AF=0.571;AN=56;BaseQRankSum=-0.610;DP=647;FS=4.480;HRun=3;HaplotypeScore=147.3396;InbreedingCoeff=0.2863;MQ=55.77;MQ0=10;MQRankSum=1.773;QD=7.90;ReadPosRankSum=-3.169;VQSLOD=-0.7638;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:24:23.94:194,24,0	0/0:12,0:12:14.12:0,14,402	0/1:12,0:4:0.59:1,0,20	0/0:17,0:9:9.35:0,9,74	1/1:35,2:35:29.89:296,30,0	0/0:23,0:23:4.42:0,4,155	0/0:11,0:11:14.64:0,15,381	0/1:41,0:41:56.58:57,0,434	0/1:21,0:21:0.29:0,0,160	1/1:33,0:33:39.66:552,40,0	1/1:25,1:25:12.32:161,12,0	0/0:16,0:16:4.66:0,5,129	1/1:21,0:17:26.47:171,26,0	1/1:22,0:21:27.76:180,28,0	0/1:27,1:28:28.81:213,0,29	0/1:34,1:34:8.70:270,0,9	0/1:25,0:23:8.10:178,0,8	0/1:14,0:12:31.96:61,0,32	1/1:17,1:18:17.95:340,18,0	1/1:30,1:31:23.92:314,24,0	0/1:13,0:13:5.27:64,0,5	1/1:23,0:23:11.30:83,11,0	0/0:27,0:27:0.98:0,1,181	0/0:18,0:17:19.72:0,20,152	0/1:23,0:23:5.53:274,0,6	1/1:29,1:30:38.50:456,39,0	0/1:28,0:27:13.82:110,0,14	1/1:16,0:15:9.38:155,9,0
chr10	81806672	.	AGAGAGG	A	660.92	PASS	AB=0.921;AC=4;AF=0.071;AN=56;BaseQRankSum=3.982;DP=672;FS=6.838;HRun=0;HaplotypeScore=199.0043;InbreedingCoeff=0.3507;MQ=60.90;MQ0=5;MQRankSum=-2.482;QD=9.31;ReadPosRankSum=-5.175;VQSLOD=0.7387;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:32.84:0,33,346	0/0:13,0:13:18.08:0,18,969	0/0:21,0:12:25.64:0,26,448	0/0:23,0:13:1.55:0,2,167	0/0:37,0:37:46.72:0,47,973	0/0:22,0:22:29.78:0,30,513	0/0:11,0:11:27.08:0,27,725	0/0:40,0:40:76.95:0,77,1470	0/0:23,0:23:32.90:0,33,768	0/0:38,0:38:17.20:0,17,1373	0/0:24,0:24:27.89:0,28,474	0/0:15,0:15:8.58:0,9,583	0/1:25,1:22:50.60:400,0,51	0/1:19,3:21:33.53:294,0,34	0/0:30,0:30:35.82:0,36,1123	0/0:33,0:32:64.64:0,65,1340	0/0:26,0:24:45.54:0,46,955	0/0:15,0:14:32.22:0,32,688	0/0:18,0:18:28.63:0,29,628	0/0:33,0:33:52.95:0,53,751	0/0:16,0:16:23.61:0,24,383	1/1:9,14:23:9.82:76,10,0	0/0:25,0:25:40.60:0,41,867	0/0:19,0:18:24.08:0,24,595	0/0:23,0:23:44.55:0,45,1270	0/0:28,0:28:31.50:0,32,927	0/0:28,0:27:41.33:0,41,813	0/0:16,0:16:23.29:0,23,579
chr10	81807168	.	G	GC	16410.12	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-15.429;DP=596;FS=11.644;HRun=3;HaplotypeScore=52.9731;InbreedingCoeff=0.9985;MQ=81.29;MQ0=0;MQRankSum=-3.078;QD=37.81;ReadPosRankSum=1.379;VQSLOD=4.4867;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:87.29:1218,87,0	0/0:10,0:10:30.08:0,30,349	0/0:16,0:16:44.27:0,44,445	0/0:15,0:15:32.96:0,33,331	1/1:1,27:28:81.27:1134,81,0	0/0:29,0:29:84.24:0,84,996	0/0:15,0:15:42.13:0,42,504	1/1:4,32:36:96.29:1309,96,0	0/0:17,0:17:48.14:0,48,567	1/1:0,22:22:66.22:923,66,0	1/1:0,20:20:57.19:798,57,0	0/0:13,0:13:39.12:0,39,468	1/1:1,21:22:63.21:877,63,0	1/1:3,16:19:45.15:630,45,0	1/1:1,21:22:63.21:881,63,0	1/1:0,12:12:33.11:462,33,0	1/1:6,28:34:78.22:1070,78,0	1/1:1,15:16:34.36:464,34,0	1/1:0,19:19:57.19:798,57,0	1/1:1,30:31:90.30:1259,90,0	1/1:4,25:29:78.25:1075,78,0	1/1:1,15:16:42.14:587,42,0	0/0:20,0:20:60.17:0,60,710	0/0:27,0:27:72.17:0,72,836	1/1:1,21:22:60.20:840,60,0	1/1:0,15:15:45.14:614,45,0	1/1:0,33:33:87.29:1217,87,0	1/1:0,8:8:18.06:252,18,0
chr10	81807916	.	T	TA	18969.75	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-8.551;DP=670;FS=2.359;HRun=0;HaplotypeScore=60.9015;InbreedingCoeff=0.9996;MQ=72.24;MQ0=0;MQRankSum=-1.453;QD=37.42;ReadPosRankSum=0.649;VQSLOD=4.8606;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:45.15:643,45,0	0/0:9,0:9:27.09:0,27,377	0/0:14,0:14:42.05:0,42,496	0/0:11,0:10:27.01:0,27,309	1/1:0,28:28:84.28:1190,84,0	0/0:21,0:21:60.17:0,60,791	0/0:15,0:15:45.13:0,45,595	1/1:0,40:40:99:1584,120,0	0/0:19,0:19:57.13:0,57,741	1/1:1,29:30:87.23:1174,87,0	1/1:0,23:23:68.71:898,69,0	0/0:28,0:28:84.24:0,84,1094	1/1:0,26:27:75.24:1055,75,0	1/1:0,30:30:72.24:1028,72,0	1/1:0,29:29:69.23:986,69,0	1/1:2,30:32:70.13:1024,70,0	1/1:0,18:18:45.15:643,45,0	1/1:0,16:16:36.12:513,36,0	1/1:0,34:34:99:1433,102,0	1/1:0,24:24:63.13:874,63,0	1/1:1,20:21:54.17:772,54,0	1/1:0,30:30:81.18:1124,81,0	0/0:30,0:30:83.09:0,83,1141	0/0:16,0:16:48.15:0,48,654	1/1:0,24:24:57.19:814,57,0	1/1:0,31:31:93.02:1233,93,0	1/1:1,37:38:99:1469,105,0	1/1:0,13:13:36.12:512,36,0
chr10	81808247	.	CT	C	2416.79	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.765;DP=651;FS=0.414;HRun=8;HaplotypeScore=71.3314;InbreedingCoeff=0.9989;MQ=69.73;MQ0=0;MQRankSum=0.812;QD=23.24;ReadPosRankSum=0.172;VQSLOD=4.0105;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.22:0,84,990	0/0:11,0:11:30.08:0,30,351	0/0:25,0:21:30.97:0,31,417	0/0:11,0:11:23.63:0,24,230	0/0:30,0:31:90.11:0,90,1030	0/0:16,0:16:42.13:0,42,507	0/0:14,0:14:42.13:0,42,503	1/1:4,24:28:69.11:666,69,0	0/0:20,0:20:60.17:0,60,713	0/0:29,0:29:78.23:0,78,922	0/0:29,0:29:75.22:0,75,896	0/0:25,0:25:72.22:0,72,863	1/1:1,22:23:66.10:637,66,0	1/1:1,23:24:60.09:579,60,0	0/0:22,0:22:45.14:0,45,544	0/0:27,0:27:77.60:0,78,914	0/0:24,0:24:66.20:0,66,797	0/0:24,0:24:66.20:0,66,795	0/0:20,0:20:51.14:0,51,596	0/0:25,0:25:75.21:0,75,879	0/0:13,0:13:30.09:0,30,362	1/1:3,26:29:72.10:695,72,0	0/0:25,0:25:69.19:0,69,812	0/0:22,0:22:54.14:0,54,629	0/0:23,0:23:57.15:0,57,668	0/0:30,0:31:93.13:0,93,1083	0/0:32,0:32:81.24:0,81,967	0/0:16,0:16:45.14:0,45,543
chr10	81808866	.	A	AT	9960.11	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-11.666;DP=642;FS=13.375;HRun=8;HaplotypeScore=73.3130;InbreedingCoeff=0.9940;MQ=69.03;MQ0=0;MQRankSum=-3.525;QD=27.51;ReadPosRankSum=2.160;VQSLOD=4.4334;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,37:39:93.27:1069,93,0	0/0:14,0:14:32.96:0,33,289	0/0:18,0:18:26.63:0,27,296	0/0:17,0:17:31.82:0,32,279	1/1:3,26:30:56.19:643,56,0	0/0:20,0:20:48.02:0,48,438	0/0:20,0:21:50.04:0,50,439	0/0:31,0:31:75.01:0,75,678	0/0:25,0:25:69.03:0,69,629	1/1:3,26:29:69.20:786,69,0	1/1:4,25:29:72.17:805,72,0	0/0:24,0:24:63.03:0,63,575	0/0:23,0:23:62.95:0,63,565	0/0:25,0:25:72.01:0,72,651	1/1:2,17:19:45.13:506,45,0	1/1:0,28:28:78.23:895,78,0	1/1:5,23:28:47.74:790,48,0	1/1:2,8:10:21.06:242,21,0	1/1:6,14:20:20.50:472,21,0	1/1:2,17:19:51.15:581,51,0	1/1:1,16:17:48.14:554,48,0	0/0:18,0:18:51.03:0,51,465	0/0:13,0:13:39.02:0,39,356	0/0:31,0:31:87.04:0,87,796	1/1:3,23:26:57.16:647,57,0	1/1:2,26:28:75.19:843,75,0	1/1:3,30:33:87.25:991,87,0	1/1:1,6:7:11.65:138,12,0
chr10	81809005	.	T	TCTTCTTGTTGTGTAAGATGTGTCGTT	52034.43	PASS	AB=0.708;AC=54;AF=0.964;AN=56;BaseQRankSum=0.022;DP=342;FS=22.285;HRun=0;HaplotypeScore=462.5681;InbreedingCoeff=-0.0501;MQ=56.82;MQ0=0;MQRankSum=-3.321;QD=152.15;ReadPosRankSum=2.806;VQSLOD=4.1947;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:24.08:1951,24,0	1/1:5,0:5:12.04:1087,12,0	0/1:3,1:6:52.63:683,0,53	0/1:4,0:6:4.25:650,0,4	1/1:15,0:15:26.45:1359,26,0	1/1:10,0:10:21.07:1630,21,0	1/1:6,0:6:14.72:548,15,0	1/1:10,0:10:30.10:1911,30,0	1/1:8,0:8:21.07:1198,21,0	1/1:26,0:26:60.20:3598,60,0	1/1:22,0:22:54.18:3871,54,0	1/1:13,0:13:25:2008,25,0	1/1:10,0:10:21.48:1575,21,0	1/1:11,0:11:30:1424,30,0	1/1:12,0:12:27.06:1753,27,0	1/1:10,0:10:27.09:2429,27,0	1/1:11,0:11:27.09:2758,27,0	1/1:1,0:1:3.01:70,3,0	1/1:5,0:5:3.01:52,3,0	1/1:18,0:18:45.14:3269,45,0	1/1:5,0:5:15.05:870,15,0	1/1:21,0:21:48.08:1837,48,0	1/1:21,0:20:40.33:2129,40,0	1/1:3,0:3:9.03:430,9,0	1/1:22,0:22:56.16:3441,56,0	1/1:15,0:15:42.14:2462,42,0	1/1:31,0:31:78.01:5331,78,0	1/1:11,0:11:24.08:1712,24,0
chr10	81810045	.	AT	A	836.18	PASS	AB=0.857;AC=3;AF=0.054;AN=56;BaseQRankSum=7.321;DP=663;FS=1.332;HRun=9;HaplotypeScore=65.2728;InbreedingCoeff=0.6723;MQ=79.45;MQ0=0;MQRankSum=0.731;QD=18.58;ReadPosRankSum=-4.504;VQSLOD=2.4691;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.29:0,96,1108	0/1:5,1:6:9.41:9,0,155	0/0:16,0:16:33.05:0,33,357	0/0:17,0:17:26.40:0,26,341	0/0:20,0:22:59.97:0,60,657	0/0:26,0:26:63.19:0,63,724	0/0:15,0:15:45.12:0,45,510	1/1:5,34:39:99:929,102,0	0/0:20,0:21:56.87:0,57,618	0/0:28,0:28:81.24:0,81,935	0/0:19,0:19:48.14:0,48,554	0/0:23,0:23:66.19:0,66,759	0/0:32,0:32:90.24:0,90,1019	0/0:23,0:23:66.16:0,66,747	0/0:24,0:24:69.21:0,69,796	0/0:37,0:36:96.29:0,96,1108	0/0:26,0:26:78.21:0,78,887	0/0:18,0:18:39.12:0,39,450	0/0:25,1:26:44.72:0,45,745	0/0:29,0:30:84.03:0,84,927	0/0:17,0:17:45.13:0,45,519	0/0:17,0:17:42.12:0,42,485	0/0:30,0:32:86.92:0,87,963	0/0:16,0:16:45.13:0,45,519	0/0:19,0:19:51.15:0,51,589	0/0:28,0:28:81.23:0,81,925	0/0:41,0:42:99:0,108,1202	0/0:10,0:10:30.09:0,30,346
chr10	81810248	.	CTT	C	11038.50	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=17.496;DP=599;FS=3.226;HRun=9;HaplotypeScore=118.3766;InbreedingCoeff=0.9640;MQ=68.46;MQ0=0;MQRankSum=-3.454;QD=30.33;ReadPosRankSum=5.750;VQSLOD=4.4401;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:22:54.16:629,54,0	0/0:7,0:7:21.06:0,21,322	0/0:13,0:13:27.91:0,28,411	0/0:4,0:4:3.15:0,3,83	1/1:3,27:30:78.22:902,78,0	0/0:19,0:19:51.17:0,51,834	0/0:16,0:16:48.15:0,48,760	0/0:33,0:33:84.26:0,84,1302	0/0:15,1:16:13.20:0,13,704	1/1:2,29:32:90.25:1038,90,0	1/1:1,20:21:54.15:627,54,0	0/0:18,0:18:51.17:0,51,837	0/0:27,0:27:75.19:0,75,1154	0/0:21,0:21:51.17:0,51,836	1/1:5,32:37:87.24:1010,87,0	1/1:2,25:27:72.21:835,72,0	1/1:0,15:15:39.12:454,39,0	1/1:2,21:23:60.16:699,60,0	1/1:4,20:24:60.15:688,60,0	1/1:1,30:31:84.24:979,84,0	1/1:0,9:9:21.05:240,21,0	0/0:20,0:20:51.17:0,51,834	0/0:24,0:24:63.22:0,63,1034	0/0:17,0:17:51.17:0,51,835	1/1:2,39:41:99:1224,105,0	1/1:0,18:18:54.16:629,54,0	1/1:3,28:31:84.24:979,84,0	1/1:0,3:3:9.03:105,9,0
chr10	81811407	.	AAT	A	2212.70	PASS	AC=18;AF=0.600;AN=30;BaseQRankSum=3.776;DP=210;FS=5.119;HRun=0;HaplotypeScore=52.3183;InbreedingCoeff=0.7882;MQ=74.95;MQ0=2;MQRankSum=-0.526;QD=17.29;ReadPosRankSum=2.941;VQSLOD=2.7489;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:5,0:5:12.04:0,12,191	./.	0/0:9,0:7:0.92:0,1,3	./.	1/1:5,21:27:60.02:711,60,0	0/0:7,0:7:15.04:0,15,215	1/1:21,0:21:17.04:84,17,0	1/1:1,8:9:2.95:247,3,0	./.	./.	1/1:3,10:14:26.92:307,27,0	1/1:14,0:14:17.04:84,17,0	1/1:4,0:4:5.68:28,6,0	./.	./.	./.	0/0:7,0:7:5.97:0,6,46	0/0:5,0:5:8.29:0,8,47	./.	./.	1/1:11,0:11:31.25:153,31,0	1/1:4,16:20:42.13:513,42,0	1/1:1,6:7:18.06:220,18,0	./.	./.	./.	0/0:5,0:6:8.97:0,9,71
chr10	81811410	.	ATATAT	A	898.30	PASS	AB=0.709;AC=5;AF=0.100;AN=50;BaseQRankSum=7.897;DP=201;FS=3.881;HRun=0;HaplotypeScore=66.9951;InbreedingCoeff=0.1856;MQ=72.30;MQ0=2;MQRankSum=-6.907;QD=18.71;ReadPosRankSum=3.389;VQSLOD=2.8681;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:5,0:5:15.05:0,15,438	0/0:7,0:6:18.04:0,18,221	0/0:7,0:5:9.50:0,10,133	0/0:4,0:4:6.02:0,6,76	0/0:26,0:26:67.26:0,67,867	0/0:7,0:7:21.07:0,21,571	0/1:13,6:19:99:217,0,160	0/0:10,0:9:22.12:0,22,353	./.	0/0:3,0:3:6.02:0,6,165	0/0:14,0:14:31.14:0,31,408	0/1:8,6:14:19.57:239,0,20	0/1:2,2:4:12.80:79,0,13	0/0:1,0:1:3.01:0,3,70	0/0:4,0:4:12.04:0,12,163	0/0:6,0:6:9:0,9,154	0/0:7,0:7:15.05:0,15,346	0/0:5,0:5:15.04:0,15,324	0/0:1,0:1:3.01:0,3,38	./.	1/1:0,11:11:33.11:482,33,0	0/0:21,0:21:57.18:0,57,762	0/0:8,0:8:24.08:0,24,332	0/0:5,0:5:15.05:0,15,256	0/0:4,0:4:9.03:0,9,177	0/0:1,0:1:3.01:0,3,38	0/0:6,0:6:12.04:0,12,314
chr10	81811517	.	A	ATTTGTTTG	15707.27	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-3.021;DP=415;FS=59.531;HRun=0;HaplotypeScore=95.9468;InbreedingCoeff=0.9143;MQ=65.69;MQ0=0;MQRankSum=-9.840;QD=55.50;ReadPosRankSum=-3.061;VQSLOD=2.0136;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,8:15:15.05:606,15,0	0/0:12,0:12:30.10:0,30,723	0/0:11,0:9:6.02:0,6,119	0/0:11,0:11:9.03:0,9,215	1/1:6,7:13:21.03:641,21,0	0/0:27,0:27:51.16:0,51,1241	0/0:13,0:13:36.12:0,36,887	1/1:18,7:27:48.15:1338,48,0	0/0:12,0:12:36.10:0,36,836	1/1:3,14:17:39.09:902,39,0	1/1:5,9:14:36.12:1312,36,0	0/0:17,0:17:45.15:0,45,1042	1/1:8,1:22:33.11:1102,33,0	1/1:7,0:16:30.10:1075,30,0	1/1:6,11:18:33.11:1299,33,0	1/1:5,8:13:18.06:755,18,0	1/1:3,6:12:6.02:252,6,0	1/1:4,4:8:8.24:229,8,0	1/1:5,7:14:30.06:935,30,0	1/1:8,9:17:30.10:1224,30,0	1/1:7,0:7:9.03:146,9,0	1/1:7,0:7:18.06:438,18,0	0/0:17,0:17:33.11:0,33,775	0/0:12,0:12:33.09:0,33,793	1/1:6,6:12:15.05:607,15,0	1/1:6,9:15:30.10:1089,30,0	1/1:8,18:27:36.59:1507,37,0	1/1:5,4:9:6.02:252,6,0
chr10	81811673	.	C	CT	10295.08	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-13.281;DP=545;FS=1.032;HRun=3;HaplotypeScore=46.6217;InbreedingCoeff=0.9980;MQ=81.27;MQ0=0;MQRankSum=-3.098;QD=37.17;ReadPosRankSum=3.098;VQSLOD=5.0688;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:51.13:685,51,0	0/0:10,0:10:30.09:0,30,360	0/0:17,0:17:48.15:0,48,576	0/0:14,0:14:27.08:0,27,324	1/1:0,15:15:42.14:588,42,0	0/0:30,0:30:87.25:0,87,1031	0/0:17,0:17:48.13:0,48,564	0/0:31,0:31:87.24:0,87,1015	0/0:19,0:19:54.17:0,54,647	1/1:1,24:25:63.16:842,63,0	1/1:0,13:13:36.12:504,36,0	0/0:18,0:18:51.16:0,51,612	0/0:27,0:27:72.22:0,72,860	0/0:29,0:29:84.26:0,84,1005	1/1:0,25:25:66.19:903,66,0	1/1:1,29:30:84.28:1176,84,0	1/1:1,18:19:48.16:672,48,0	1/1:0,11:11:30.10:420,30,0	1/1:1,9:10:24.04:301,24,0	1/1:1,9:10:27.09:378,27,0	1/1:0,23:23:69.23:966,69,0	0/0:13,0:13:39.12:0,39,467	0/0:20,0:20:60.18:0,60,720	0/0:23,0:23:66.20:0,66,792	1/1:0,9:9:27.09:378,27,0	1/1:0,26:26:78.25:1076,78,0	1/1:3,32:35:84.24:1154,84,0	1/1:0,6:6:18.06:252,18,0
chr10	81812787	.	ATGTGTGTG	A	6977.24	PASS	AB=0.733;AC=28;AF=0.500;AN=56;BaseQRankSum=4.246;DP=565;FS=9.827;HRun=0;HaplotypeScore=157.7655;InbreedingCoeff=0.6912;MQ=56.26;MQ0=4;MQRankSum=-8.013;QD=22.65;ReadPosRankSum=1.273;VQSLOD=4.0752;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,10:32:27.29:361,0,27	0/0:9,0:9:9.03:0,9,314	0/0:18,0:9:3.01:0,3,40	0/0:19,0:11:12.04:0,12,286	1/1:10,10:21:14.97:339,15,0	0/0:35,0:38:15.49:0,15,338	0/0:15,0:16:33.11:0,33,1187	0/0:30,0:30:36.07:0,36,580	0/0:16,0:16:6.02:0,6,199	1/1:17,13:31:35.96:776,36,0	1/1:9,11:20:15.05:380,15,0	0/0:14,0:14:9.49:0,9,322	0/0:11,0:18:24.12:0,24,470	0/0:8,0:17:9.03:0,9,325	1/1:4,10:14:27.09:685,27,0	1/1:7,13:20:20.74:532,21,0	0/1:11,8:19:33.80:143,0,34	1/1:11,2:12:3.01:76,3,0	1/1:8,1:10:6.02:132,6,0	1/1:5,16:20:21.07:533,21,0	1/1:17,7:25:5.47:92,5,0	0/0:7,0:18:22.49:0,22,753	0/0:11,0:11:3.01:0,3,116	0/0:30,0:29:23.79:0,24,783	1/1:5,13:18:39.13:989,39,0	1/1:9,12:21:36.10:798,36,0	1/1:13,17:30:39.13:989,39,0	1/1:7,6:12:6.02:152,6,0
chr10	81813072	.	AT	A	8221.97	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=15.594;DP=531;FS=0.352;HRun=7;HaplotypeScore=80.5941;InbreedingCoeff=0.9100;MQ=69.57;MQ0=0;MQRankSum=-0.808;QD=25.14;ReadPosRankSum=1.485;VQSLOD=5.2986;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,44:47:99:1194,117,0	0/0:7,0:7:21.07:0,21,264	0/1:10,0:8:5.07:5,0,93	0/0:12,0:9:0.80:0,1,54	1/1:1,29:30:78.16:791,78,0	0/0:27,0:27:72.22:0,72,893	0/0:19,0:19:51.12:0,51,591	0/0:26,0:26:51.15:0,51,620	0/0:10,0:10:30.10:0,30,377	1/1:0,19:19:54.12:547,54,0	1/1:2,22:24:60.13:611,60,0	0/0:16,0:16:45.14:0,45,566	0/0:12,0:12:36.12:0,36,453	0/0:20,0:20:54.16:0,54,668	1/1:1,20:21:57.13:582,57,0	1/1:1,10:11:30.07:306,30,0	1/1:2,24:26:60.14:612,60,0	1/1:0,14:14:42.09:428,42,0	1/1:3,21:24:63.12:637,63,0	1/1:1,11:12:30.07:306,30,0	1/1:2,9:11:18.04:184,18,0	0/0:22,0:22:63.20:0,63,792	0/0:15,0:15:39.11:0,39,477	0/0:18,0:18:48.15:0,48,604	1/1:2,27:29:75.17:765,75,0	1/1:1,15:16:45.10:459,45,0	1/1:4,18:22:44.22:458,44,0	1/1:0,11:11:33.08:337,33,0
chr10	81813319	.	ATT	A	7439.98	PASS	AB=0.538;AC=29;AF=0.518;AN=56;BaseQRankSum=-0.172;DP=452;FS=16.084;HRun=9;HaplotypeScore=65.7234;InbreedingCoeff=0.9566;MQ=64.55;MQ0=6;MQRankSum=2.606;QD=28.62;ReadPosRankSum=2.097;VQSLOD=3.3240;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:60.18:699,60,0	0/0:8,0:8:24.08:0,24,387	0/0:17,0:7:15.05:0,15,233	0/0:20,0:12:20.79:0,21,256	1/1:0,24:23:57.17:664,57,0	0/0:18,0:18:51.17:0,51,834	0/0:8,0:8:24.08:0,24,394	0/0:1,0:16:37.43:0,37,131	0/0:15,0:15:45.15:0,45,731	1/1:0,21:18:51.15:593,51,0	1/1:1,17:16:39.11:454,39,0	0/0:14,0:14:39.13:0,39,630	0/0:1,0:14:27.32:0,27,96	0/0:1,0:13:22.29:0,22,89	1/1:0,13:13:39.12:455,39,0	1/1:0,9:9:24.07:279,24,0	1/1:0,20:20:51.15:594,51,0	0/1:2,12:14:0.56:284,0,1	1/1:3,14:16:39.11:454,39,0	1/1:0,23:20:54.15:629,54,0	1/1:0,13:13:39.12:454,39,0	0/0:1,0:27:59.89:0,60,211	0/0:11,0:11:24.08:0,24,394	0/0:10,0:10:27.08:0,27,418	1/1:1,10:10:21.06:245,21,0	1/1:0,17:16:45.12:515,45,0	1/1:2,24:26:66.19:769,66,0	1/1:1,10:10:30.09:350,30,0
chr10	81813623	.	G	GA	6273.99	PASS	AB=0.714;AC=29;AF=0.558;AN=52;BaseQRankSum=8.479;DP=724;FS=4.524;HRun=3;HaplotypeScore=149.5401;InbreedingCoeff=0.9093;MQ=36.68;MQ0=80;MQRankSum=0.238;QD=16.05;ReadPosRankSum=0.513;VQSLOD=4.3175;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,24:21:23.94:303,24,0	0/0:14,0:13:33.10:0,33,394	./.	./.	1/1:4,23:21:30.01:372,30,0	0/0:25,0:24:54.09:0,54,607	0/0:32,0:28:57.08:0,57,638	0/0:28,0:21:57.17:0,57,682	0/0:31,0:28:72.08:0,72,826	1/1:7,23:23:44.51:626,45,0	1/1:4,16:12:18.06:251,18,0	0/0:39,0:36:75.20:0,75,877	0/0:35,0:34:96.27:0,96,1125	0/0:43,0:39:99:0,102,1200	1/1:8,34:23:42.14:578,42,0	1/1:3,27:19:33.11:461,33,0	1/1:10,22:22:48.16:653,48,0	0/1:15,10:13:41.76:304,0,42	1/1:8,10:10:18.02:213,18,0	1/1:1,17:10:27.05:345,27,0	1/1:14,12:13:24:284,24,0	0/0:38,0:36:78.19:0,78,915	0/0:14,0:12:24.05:0,24,266	0/0:33,1:26:48.08:0,48,554	1/1:2,11:6:12.04:168,12,0	1/1:4,26:23:57.14:756,57,0	1/1:7,34:29:57.19:791,57,0	1/1:0,6:5:12.04:168,12,0
chr10	81814446	.	T	TAG	814.74	PASS	AC=24;AF=0.571;AN=42;BaseQRankSum=0.952;DP=255;FS=1.836;HRun=0;HaplotypeScore=43.9364;InbreedingCoeff=0.6789;MQ=46.51;MQ0=43;MQRankSum=3.594;QD=14.81;ReadPosRankSum=-3.797;VQSLOD=2.3757;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:3:6.02:83,6,0	0/0:14,0:14:26.97:0,27,353	0/0:21,0:5:10.40:0,10,130	0/0:17,0:8:1.69:0,2,117	1/1:3,0:1:3.01:42,3,0	0/0:23,0:23:52.47:0,52,672	0/0:17,0:13:35.43:0,35,374	1/1:8,0:2:6:75,6,0	0/0:14,0:13:25.57:0,26,277	1/1:1,4:8:18.01:236,18,0	./.	0/0:23,0:22:61.59:0,62,653	1/1:2,0:1:3.01:44,3,0	1/1:3,0:2:6.02:86,6,0	1/1:2,0:2:3.01:43,3,0	1/1:7,0:4:12.03:156,12,0	./.	1/1:6,0:2:3:38,3,0	./.	./.	./.	1/1:4,0:3:6.01:74,6,0	0/0:28,0:27:59.79:0,60,776	0/0:34,0:31:54.47:0,54,661	1/1:1,0:1:3.01:48,3,0	./.	./.	1/1:2,0:1:3.01:47,3,0
chr10	81815242	.	AT	A	904.95	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=0.445;DP=558;FS=0.603;HRun=7;HaplotypeScore=73.1889;InbreedingCoeff=0.6630;MQ=73.20;MQ0=0;MQRankSum=2.099;QD=19.67;ReadPosRankSum=-3.850;VQSLOD=2.4375;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.19:0,60,748	0/0:13,0:13:33.11:0,33,415	0/1:8,0:8:10.12:10,0,91	0/0:16,0:16:24.49:0,24,260	0/0:33,0:33:87.25:0,87,1058	0/0:23,0:23:69.18:0,69,829	0/0:10,0:10:30.09:0,30,365	1/1:5,33:38:99:997,102,0	0/0:15,0:15:45.10:0,45,535	0/0:30,0:30:75.23:0,75,934	0/0:23,0:23:66.21:0,66,830	0/0:16,0:16:45.06:0,45,522	0/0:21,0:21:45.13:0,45,553	0/0:15,0:15:33.11:0,33,415	0/0:23,0:23:69.19:0,69,841	0/0:16,0:16:45.13:0,45,553	0/0:24,0:24:60.18:0,60,740	0/0:17,0:17:48.15:0,48,604	0/0:21,0:21:48.15:0,48,593	0/0:32,0:32:93.22:0,93,1113	0/0:9,0:9:24.08:0,24,302	0/0:11,0:11:27.05:0,27,301	0/0:21,0:21:57.18:0,57,717	0/0:6,0:6:18.06:0,18,225	0/0:24,0:24:69.17:0,69,826	0/0:18,0:18:54.17:0,54,669	0/0:38,0:37:99:0,105,1254	0/0:15,0:15:45.14:0,45,566
chr10	81815790	.	TA	T	3156.75	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.929;DP=883;FS=7.107;HRun=5;HaplotypeScore=82.8724;InbreedingCoeff=0.9792;MQ=84.57;MQ0=0;MQRankSum=-2.626;QD=29.78;ReadPosRankSum=3.512;VQSLOD=4.1982;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:64:99:0,193,2580	0/0:11,0:11:27.09:0,27,369	0/0:32,0:32:78.06:0,78,977	0/0:28,0:28:78.15:0,78,948	0/0:28,0:28:78.26:0,78,1067	0/0:35,0:35:99:0,102,1395	0/0:23,0:23:69.23:0,69,944	0/0:25,0:25:63.21:0,63,861	0/0:37,0:37:99:0,111,1483	0/0:31,0:31:87.28:0,87,1161	0/0:29,0:29:87.29:0,87,1190	0/0:38,0:38:99:0,111,1489	1/1:2,38:40:99:1225,108,0	1/1:0,34:34:96.27:1089,96,0	0/0:38,0:38:99:0,99,1354	0/0:45,0:45:99:0,126,1723	0/0:25,0:25:66.20:0,66,885	0/0:12,0:12:36.12:0,36,491	0/0:18,0:18:48.16:0,48,657	0/0:37,0:37:99:0,105,1422	0/0:52,0:52:99:0,156,2081	1/1:1,31:32:87.25:985,87,0	0/0:18,0:18:54.18:0,54,739	0/0:32,0:32:93.31:0,93,1271	0/0:28,0:28:72.22:0,72,956	0/0:51,0:51:99:0,144,1956	0/0:37,0:36:99:0,111,1483	0/0:3,0:3:9.03:0,9,123
chr10	81816118	.	G	GAA	11035.48	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-6.254;DP=648;FS=6.807;HRun=9;HaplotypeScore=83.9624;InbreedingCoeff=0.9987;MQ=78.00;MQ0=1;MQRankSum=-5.331;QD=24.74;ReadPosRankSum=1.310;VQSLOD=4.4059;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:28:55.08:191,55,0	0/0:14,0:14:36.09:0,36,383	0/0:27,0:23:36.03:0,36,365	0/0:21,0:20:40.26:0,40,387	1/1:3,18:21:54.06:752,54,0	0/0:27,0:28:63.09:0,63,725	0/0:19,0:19:51.09:0,51,526	1/1:5,26:35:86.17:1150,86,0	0/0:23,0:23:63.14:0,63,670	1/1:1,20:21:63.16:869,63,0	1/1:5,16:24:50.56:660,51,0	0/0:29,0:29:75.13:0,75,798	1/1:5,0:18:31.07:106,31,0	1/1:6,2:31:27.80:232,28,0	1/1:1,20:22:36.12:554,36,0	1/1:2,18:20:42.14:647,42,0	1/1:2,21:24:41.63:609,42,0	1/1:2,13:16:21.07:306,21,0	1/1:1,13:16:43.42:574,43,0	1/1:6,23:32:73.64:976,74,0	1/1:3,19:23:54.18:814,54,0	1/1:6,0:25:42.80:162,43,0	0/0:23,0:24:59.84:0,60,609	0/0:16,0:16:44.13:0,44,453	1/1:0,16:17:33.11:491,33,0	1/1:7,25:35:81.87:1054,82,0	1/1:4,16:22:41.06:527,41,0	1/1:2,12:15:24.08:364,24,0
chr10	81816876	.	A	ATATCTC	6160.21	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=-4.584;DP=615;FS=5.784;HRun=0;HaplotypeScore=165.2853;InbreedingCoeff=0.2883;MQ=68.89;MQ0=10;MQRankSum=0.143;QD=11.26;ReadPosRankSum=2.904;VQSLOD=3.6779;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:15.11:243,15,0	0/0:10,0:10:21.04:0,21,281	0/0:30,0:16:2.68:0,3,24	0/1:38,0:14:4.15:4,0,23	1/1:26,0:26:25.56:546,26,0	0/1:33,0:33:99:135,0,353	0/0:11,0:11:14.89:0,15,136	1/1:42,0:40:43.08:339,43,0	0/1:10,0:10:12.50:13,0,94	1/1:29,0:29:51.57:768,52,0	1/1:22,0:22:8.81:286,9,0	0/1:15,0:15:41.93:42,0,238	1/1:22,0:22:6.02:72,6,0	0/0:17,0:17:0.94:0,1,1	1/1:13,0:13:5.56:50,6,0	1/1:24,0:24:21.03:311,21,0	1/1:26,0:25:18.83:291,19,0	1/1:21,0:21:27.02:292,27,0	1/1:12,0:11:18.05:313,18,0	1/1:9,17:29:14.57:182,15,0	1/1:12,0:12:12.86:99,13,0	1/1:11,0:11:1.18:36,1,0	0/1:18,0:18:68.90:69,0,199	0/1:22,0:22:99:135,0,115	1/1:32,0:32:38.08:622,38,0	1/1:27,0:26:50.53:751,51,0	1/1:23,0:23:26.79:284,27,0	1/1:14,0:14:12.51:277,13,0
chr10	81816902	.	ATCTC	A	595.95	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-0.614;DP=713;FS=0.000;HRun=0;HaplotypeScore=175.7087;InbreedingCoeff=0.6403;MQ=57.85;MQ0=28;MQRankSum=-4.908;QD=2.56;ReadPosRankSum=-2.901;VQSLOD=2.1207;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:13.50:0,13,381	0/0:2,0:9:16.65:0,17,80	0/1:56,0:6:0.88:1,0,13	0/1:83,0:13:0.42:0,0,12	0/0:26,0:26:57.16:0,57,929	0/0:29,0:29:70.92:0,71,1039	1/1:3,15:18:12.04:198,12,0	1/1:42,0:40:27.59:491,28,0	0/0:14,0:14:34.78:0,35,462	0/0:36,0:36:96.31:0,96,1574	0/0:24,0:24:54.10:0,54,825	0/0:21,0:21:50.33:0,50,595	1/1:22,0:22:5.82:34,6,0	0/0:18,0:19:2.99:0,3,24	0/0:17,0:17:30.97:0,31,464	0/0:26,0:26:45.03:0,45,672	0/0:25,0:25:43.61:0,44,655	0/0:21,0:21:45.11:0,45,719	0/0:11,0:8:21.02:0,21,347	0/0:29,0:30:34.15:0,34,494	0/0:8,0:8:9.01:0,9,126	0/1:12,0:12:2.70:3,0,83	0/0:17,0:16:37.90:0,38,490	0/0:21,0:21:32.79:0,33,472	0/0:39,0:39:75.57:0,76,1196	0/0:28,0:27:72.19:0,72,1174	0/0:24,0:24:46.04:0,46,686	0/0:9,0:9:21.07:0,21,370
chr10	81816906	.	C	CTATCTCTA	1416.89	PASS	AB=0.951;AC=23;AF=0.411;AN=56;BaseQRankSum=2.956;DP=710;FS=0.419;HRun=0;HaplotypeScore=213.0766;InbreedingCoeff=-0.2631;MQ=55.29;MQ0=28;MQRankSum=-1.639;QD=2.69;ReadPosRankSum=2.101;VQSLOD=2.6515;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:84.29:84,0,208	0/0:9,0:9:21.06:0,21,382	0/0:55,0:7:8.93:0,9,66	0/1:84,0:11:24.42:24,0,41	0/1:25,0:25:99:108,0,404	0/0:29,0:29:41.59:0,42,835	0/1:17,0:17:99:112,0,111	1/1:42,0:40:36.47:452,36,0	0/0:13,0:13:12.20:0,12,315	0/1:37,0:37:91.52:92,0,710	0/1:24,0:24:82.86:83,0,463	0/0:21,0:21:18.65:0,19,487	1/1:0,20:21:6.01:145,6,0	0/1:1,19:22:0.13:0,0,1	0/0:16,0:16:27.01:0,27,387	0/1:26,0:26:41.20:41,0,324	0/1:25,0:26:16.31:16,0,407	0/0:20,0:20:40.69:0,41,484	0/1:11,0:8:43.35:43,0,51	0/1:28,0:28:6.51:7,0,303	0/1:8,0:8:14.09:14,0,36	1/1:0,12:12:1.11:90,1,0	0/0:20,0:19:17.48:0,17,420	0/1:22,0:22:31.59:32,0,371	0/1:36,0:38:69.19:69,0,541	0/1:29,0:28:65.58:66,0,428	0/1:22,0:22:29.12:29,0,412	0/1:6,0:9:72.72:73,0,95
chr10	81816920	.	C	CTA	2553.53	PASS	AB=0.979;AC=24;AF=0.429;AN=56;BaseQRankSum=-3.892;DP=712;FS=1.744;HRun=0;HaplotypeScore=150.6971;InbreedingCoeff=-0.0305;MQ=55.70;MQ0=24;MQRankSum=-4.393;QD=5.02;ReadPosRankSum=-7.453;VQSLOD=0.5884;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:25.27:25,0,106	0/0:10,0:10:20.88:0,21,157	0/0:55,0:8:6.30:0,6,90	0/1:82,0:9:2.02:2,0,8	0/1:29,0:29:99:166,0,202	0/0:28,0:28:84.16:0,84,1122	1/1:16,0:16:2.77:29,3,0	1/1:4,38:42:81.26:1416,81,0	0/0:14,0:14:39.11:0,39,553	0/1:37,0:37:89.72:90,0,279	0/1:24,0:24:51.15:51,0,237	0/0:23,0:23:69.13:0,69,922	1/1:22,0:22:11.87:99,12,0	1/1:23,0:23:14.71:107,15,0	0/0:17,0:17:1.71:0,2,122	0/1:30,0:30:79.01:129,0,79	0/1:26,1:27:98.54:99,0,186	0/0:17,0:17:11.06:0,11,208	0/1:10,0:9:2.40:55,0,2	0/1:26,0:26:69.67:70,0,172	0/1:8,0:8:33.11:33,0,86	1/1:12,0:12:15.83:72,16,0	0/0:22,0:21:60.05:0,60,702	0/0:17,0:17:42.04:0,42,508	0/1:38,1:40:99:148,0,153	0/1:28,0:27:57.16:57,0,222	0/1:21,0:21:6.72:7,0,187	0/1:8,0:11:74.31:74,0,90
chr10	81817442	.	CA	C	14257.06	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=14.123;DP=638;FS=3.394;HRun=1;HaplotypeScore=72.5296;InbreedingCoeff=0.9976;MQ=83.24;MQ0=0;MQRankSum=-3.914;QD=38.02;ReadPosRankSum=4.060;VQSLOD=5.5147;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,51:51:99:1845,132,0	0/0:6,0:6:18.06:0,18,286	0/0:18,0:19:56.85:0,57,771	0/0:17,0:18:44.04:0,44,634	1/1:0,20:20:45.15:626,45,0	0/0:17,0:17:48.16:0,48,762	0/0:23,0:23:69.22:0,69,1080	0/0:22,0:22:66.23:0,66,1054	0/0:20,0:20:57.18:0,57,887	1/1:0,27:27:78.25:1070,78,0	1/1:0,16:16:48.16:670,48,0	0/0:19,0:19:57.19:0,57,909	0/0:24,0:24:69.21:0,69,1055	0/0:23,0:23:69.24:0,69,1099	1/1:0,47:47:99:1720,123,0	1/1:0,25:25:69.23:965,69,0	1/1:0,25:25:72.24:1007,72,0	1/1:0,11:11:27.09:375,27,0	1/1:0,22:22:63.16:841,63,0	1/1:0,16:16:45.15:629,45,0	1/1:0,31:31:84.28:1174,84,0	0/0:21,0:21:63.20:0,63,981	0/0:28,0:28:81.26:0,81,1269	0/0:23,0:23:69.24:0,69,1100	1/1:0,17:17:45.15:629,45,0	1/1:0,22:22:66.20:904,66,0	1/1:0,39:39:99:1549,111,0	1/1:0,6:6:18.06:252,18,0
chr10	81817782	.	AACACACACAC	A	2981.52	PASS	AB=0.810;AC=25;AF=0.463;AN=54;BaseQRankSum=2.065;DP=469;FS=8.717;HRun=0;HaplotypeScore=136.0360;InbreedingCoeff=0.4831;MQ=72.05;MQ0=14;MQRankSum=-3.003;QD=16.12;ReadPosRankSum=2.329;VQSLOD=2.0348;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:35:7.35:7,0,88	0/0:7,0:7:6.02:0,6,295	0/0:37,0:17:3.01:0,3,48	0/0:41,0:21:11.41:0,11,379	1/1:9,3:13:15.05:347,15,0	0/0:8,0:13:6.02:0,6,236	0/0:19,0:18:15.05:0,15,535	0/0:20,0:20:24.06:0,24,759	0/0:7,0:17:3.01:0,3,122	1/1:10,1:10:3.01:70,3,0	1/1:8,5:13:7.29:440,7,0	0/0:11,0:17:12.01:0,12,304	0/0:13,0:13:6.02:0,6,166	0/0:14,0:13:3.48:0,3,124	1/1:10,5:15:9.03:270,9,0	1/1:10,7:18:21.07:571,21,0	0/1:15,3:18:44.21:259,0,44	0/1:10,1:12:9.45:364,0,9	1/1:7,1:8:3.01:90,3,0	1/1:12,4:16:14.64:325,15,0	./.	0/0:17,0:17:1.75:0,2,95	0/0:17,0:23:16.06:0,16,444	0/0:17,0:25:9.03:0,9,232	1/1:7,0:7:5.99:67,6,0	1/1:3,4:7:12.01:230,12,0	1/1:6,0:7:3:30,3,0	1/1:0,2:2:3.01:90,3,0
chr10	81817919	.	CTGTGTGTG	C	2016.54	PASS	AB=0.881;AC=29;AF=0.537;AN=54;BaseQRankSum=1.831;DP=606;FS=12.373;HRun=0;HaplotypeScore=162.1211;InbreedingCoeff=0.2058;MQ=61.17;MQ0=24;MQRankSum=-2.671;QD=5.36;ReadPosRankSum=0.709;VQSLOD=2.0678;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:25:8.10:48,0,8	0/0:17,0:17:30.07:0,30,967	./.	0/0:49,0:22:2.98:0,3,22	1/1:17,3:21:8.46:48,8,0	0/0:14,0:15:12.04:0,12,356	0/1:23,1:27:7.37:7,0,32	0/0:23,0:22:16.43:0,16,108	0/0:16,0:17:27.05:0,27,470	0/1:22,0:23:53.47:73,0,53	0/1:13,0:15:11.86:12,0,52	0/0:19,0:22:36.47:0,36,668	0/1:8,1:9:11.03:80,0,11	0/1:15,2:20:38.24:207,0,38	1/1:21,5:25:0.61:255,1,0	1/1:17,3:21:1.30:308,1,0	1/1:20,8:29:12.04:280,12,0	1/1:16,1:16:14.46:146,14,0	1/1:19,0:17:3.40:25,3,0	1/1:9,2:12:5.72:40,6,0	1/1:27,0:27:8.42:71,8,0	0/1:12,1:13:2.63:3,0,27	0/0:12,0:11:20.81:0,21,378	0/0:31,0:34:63.10:0,63,1434	0/1:24,2:26:24.57:256,0,25	1/1:21,1:24:11.60:204,12,0	1/1:11,1:12:4.56:79,5,0	0/1:3,0:4:21.83:50,0,22
chr10	81818008	.	AAG	A	1752.16	PASS	AB=0.970;AC=17;AF=0.315;AN=54;BaseQRankSum=-3.112;DP=564;FS=1.786;HRun=0;HaplotypeScore=138.4095;InbreedingCoeff=0.6372;MQ=55.14;MQ0=5;MQRankSum=3.518;QD=8.23;ReadPosRankSum=6.052;VQSLOD=3.3133;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:23:12.78:0,13,63	0/0:8,0:9:12.01:0,12,141	./.	0/0:15,0:11:3.01:0,3,46	0/0:3,0:23:24.96:0,25,243	0/1:18,1:20:16.39:16,0,352	0/0:13,0:32:14.19:0,14,101	0/0:37,0:36:35.92:0,36,375	1/1:13,4:17:6.02:67,6,0	0/0:2,0:24:40.28:0,40,355	0/0:1,0:21:8.46:0,8,62	1/1:4,6:14:8.64:190,9,0	1/1:8,11:19:29.92:316,30,0	1/1:11,8:21:23.73:230,24,0	0/1:1,0:15:3.14:3,0,61	0/0:3,0:23:17.17:0,17,130	0/0:11,0:16:26.20:0,26,198	0/0:6,0:20:19.18:0,19,149	0/0:1,0:14:20.79:0,21,167	0/0:1,0:19:8.29:0,8,36	0/0:3,0:15:2.24:0,2,23	1/1:17,7:24:23.95:270,24,0	1/1:7,8:19:20.55:266,21,0	1/1:18,24:42:51.01:572,51,0	0/1:3,0:18:7.41:7,0,49	0/0:3,0:24:33.93:0,34,290	0/0:0,0:10:5.74:0,6,38	0/0:4,0:5:8.99:0,9,76
chr10	81821639	.	AACACACACACACACACACACAC	A	8535.34	PASS	AB=0.707;AC=25;AF=0.446;AN=56;BaseQRankSum=7.197;DP=575;FS=20.375;HRun=0;HaplotypeScore=260.8553;InbreedingCoeff=0.5376;MQ=57.47;MQ0=21;MQRankSum=-7.850;QD=30.70;ReadPosRankSum=0.816;VQSLOD=1.7323;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,19:29:18.02:751,18,0	0/0:3,0:3:9.01:0,9,382	0/0:45,0:18:12.01:0,12,199	0/0:49,0:26:27.07:0,27,550	1/1:8,12:20:20.62:217,21,0	0/0:11,0:19:18.92:0,19,937	0/0:20,0:19:23.29:0,23,1646	0/0:22,0:22:18.05:0,18,782	0/0:14,0:14:24.08:0,24,1732	1/1:6,8:14:2.49:275,2,0	1/1:9,9:18:20.89:603,21,0	0/0:22,0:23:54.17:0,54,3529	0/0:13,0:23:32.32:0,32,1920	0/0:9,0:21:27.09:0,27,1630	1/1:8,12:20:3.20:687,3,0	1/1:3,13:16:5.09:689,5,0	0/1:18,5:22:62.81:1136,0,63	0/1:4,3:7:17.82:169,0,18	1/1:8,8:16:18.68:545,19,0	0/1:9,15:24:41.58:640,0,42	1/1:13,1:14:7.94:88,8,0	0/0:16,0:20:45.12:0,45,2523	0/0:7,0:9:18.06:0,18,1493	0/0:16,0:29:32.19:0,32,2609	1/1:8,18:26:17.09:1079,17,0	0/1:7,0:18:76.28:546,0,76	1/1:5,18:25:18.04:1005,18,0	0/1:5,0:6:25.92:105,0,26
chr10	81823925	.	A	AG	20725.01	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-15.283;DP=661;FS=4.730;HRun=0;HaplotypeScore=57.6169;InbreedingCoeff=0.9905;MQ=93.60;MQ0=0;MQRankSum=-5.672;QD=44.28;ReadPosRankSum=4.815;VQSLOD=5.1504;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:78.27:1236,78,0	0/0:9,0:9:27.09:0,27,377	0/0:32,0:32:86.43:0,86,1158	0/0:24,0:24:62.80:0,63,782	1/1:0,25:25:66.22:1055,66,0	0/0:18,0:18:54.18:0,54,754	0/0:17,0:17:51.17:0,51,713	1/1:1,37:38:99:1689,108,0	0/0:26,0:26:78.24:0,78,1071	1/1:1,22:23:66.20:1025,66,0	1/1:0,20:20:57.19:908,57,0	0/0:28,0:28:84.28:0,84,1174	1/1:0,34:34:96.29:1534,96,0	1/1:0,23:23:66.23:1055,66,0	1/1:0,24:24:66.23:1055,66,0	1/1:1,40:41:99:1774,111,0	1/1:0,34:34:93.32:1486,93,0	1/1:0,9:9:24.08:383,24,0	1/1:1,15:17:51.12:772,51,0	1/1:0,28:28:78.27:1235,78,0	1/1:0,28:28:84.29:1341,84,0	1/1:0,23:23:60.20:938,60,0	0/0:18,0:18:51.16:0,51,696	0/0:21,0:20:63.17:0,63,856	1/1:0,29:29:78.27:1247,78,0	1/1:0,15:16:48.16:748,48,0	1/1:0,25:25:69.24:1101,69,0	1/1:0,3:3:9.03:144,9,0
chr10	81824091	.	A	AT	10664.38	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-14.370;DP=574;FS=2.194;HRun=8;HaplotypeScore=59.8698;InbreedingCoeff=0.9699;MQ=84.13;MQ0=0;MQRankSum=-2.492;QD=26.86;ReadPosRankSum=0.010;VQSLOD=5.4518;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:26:45.11:506,45,0	0/0:8,0:8:21:0,21,192	0/0:23,0:23:51.02:0,51,462	0/0:20,0:20:17.24:0,17,284	1/1:6,14:20:42.05:457,42,0	0/0:15,0:15:33:0,33,302	0/0:24,0:24:69.02:0,69,626	1/1:4,28:33:87.05:953,87,0	0/0:18,0:18:36:0,36,329	1/1:3,8:11:27.06:300,27,0	1/1:3,17:20:57.12:636,57,0	0/0:36,0:36:84.02:0,84,769	1/1:5,18:23:54.16:617,54,0	1/1:2,11:13:33.10:381,33,0	1/1:4,22:26:57.17:658,57,0	1/1:2,32:34:90.27:1039,90,0	1/1:1,25:25:75.22:866,75,0	1/1:0,8:8:24.07:277,24,0	1/1:1,19:21:60.15:672,60,0	1/1:5,20:25:60.02:632,60,0	1/1:2,25:27:48.14:554,48,0	1/1:2,13:16:27.08:312,27,0	0/0:11,0:11:27.01:0,27,247	0/0:22,0:22:57.02:0,57,522	1/1:3,19:24:45.13:512,45,0	1/1:3,16:19:48.11:532,48,0	1/1:1,22:23:63.19:727,63,0	1/1:0,2:2:3.01:35,3,0
chr10	81824838	.	T	TG	21212.09	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-11.375;DP=673;FS=1.498;HRun=0;HaplotypeScore=59.1886;InbreedingCoeff=0.9989;MQ=79.75;MQ0=0;MQRankSum=-5.063;QD=41.11;ReadPosRankSum=1.974;VQSLOD=5.5186;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:63.15:955,63,0	0/0:10,0:10:30.09:0,30,403	0/0:19,0:19:47.41:0,47,611	0/0:11,0:11:24.05:0,24,302	1/1:1,38:39:96.33:1498,96,0	0/0:31,0:31:93.22:0,93,1195	0/0:7,0:7:21.07:0,21,293	1/1:0,41:41:99:1764,120,0	0/0:23,0:23:69.22:0,69,946	1/1:0,34:34:99:1512,102,0	1/1:0,36:36:99:1414,99,0	0/0:21,0:21:63.20:0,63,856	1/1:0,36:36:93.32:1454,93,0	1/1:0,27:27:60.20:938,60,0	1/1:1,27:28:72.25:1124,72,0	1/1:0,24:24:69.23:1079,69,0	1/1:1,18:19:48.16:750,48,0	1/1:0,15:15:42.10:624,42,0	1/1:0,13:13:39.10:564,39,0	1/1:1,30:31:81.28:1255,81,0	1/1:0,17:17:36.12:563,36,0	1/1:0,26:26:69.23:1079,69,0	0/0:19,0:19:57.18:0,57,779	0/0:16,0:16:48.14:0,48,652	1/1:0,33:33:87.30:1360,87,0	1/1:0,29:29:87.30:1359,87,0	1/1:0,33:33:90.31:1405,90,0	1/1:0,11:11:33.11:515,33,0
chr10	81826385	.	A	AT	11728.51	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-17.487;DP=655;FS=3.478;HRun=7;HaplotypeScore=54.4082;InbreedingCoeff=0.9994;MQ=81.62;MQ0=0;MQRankSum=-3.533;QD=30.95;ReadPosRankSum=3.723;VQSLOD=5.1850;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:57.12:671,57,0	0/0:15,0:15:42.05:0,42,400	0/0:16,0:16:39.01:0,39,365	0/0:17,0:18:35.96:0,36,332	1/1:4,37:41:99:1268,105,0	0/0:20,0:20:51.06:0,51,487	0/0:15,0:15:45.02:0,45,425	0/0:32,0:32:90.14:0,90,865	0/0:9,0:9:27.04:0,27,261	1/1:4,32:36:99:1179,99,0	1/1:0,23:23:66.20:797,66,0	0/0:18,0:18:45.05:0,45,429	0/0:31,0:31:90.14:0,90,869	0/0:27,1:28:41.87:0,42,682	1/1:1,19:20:54.17:652,54,0	1/1:3,34:37:61.26:1007,61,0	1/1:4,20:24:63.17:748,63,0	1/1:4,16:20:42.13:507,42,0	1/1:3,22:25:66.19:786,66,0	1/1:3,25:29:78.15:908,78,0	1/1:2,9:12:26.95:305,27,0	0/0:28,0:28:75.12:0,75,724	0/0:27,0:27:72.09:0,72,685	0/0:19,0:19:51.03:0,51,483	1/1:2,31:33:90.28:1087,90,0	1/1:0,20:20:60.14:689,60,0	1/1:1,25:26:69.21:834,69,0	1/1:2,10:12:24.07:290,24,0
chr10	81827600	.	A	ATC	507.67	PASS	AB=0.817;AC=6;AF=0.111;AN=54;BaseQRankSum=7.540;DP=296;FS=76.717;HRun=0;HaplotypeScore=84.7507;InbreedingCoeff=0.1104;MQ=37.47;MQ0=0;MQRankSum=-3.883;QD=6.51;ReadPosRankSum=0.535;VQSLOD=-0.4806;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:22.58:0,23,268	0/0:3,0:3:6.01:0,6,67	0/0:8,0:5:12.04:0,12,144	0/0:4,0:3:6.01:0,6,73	0/0:8,1:9:3.01:0,3,47	0/0:9,0:9:18.06:0,18,252	0/1:12,0:12:14.02:14,0,14	0/1:11,14:25:63.62:122,0,64	0/1:7,1:8:20.07:20,0,164	0/0:13,0:13:36.98:0,37,518	0/0:9,0:9:7.26:0,7,77	0/0:13,0:13:15.52:0,16,194	0/1:9,4:14:85.78:86,0,204	0/0:6,2:10:9.90:0,10,118	0/0:12,0:12:15.52:0,16,193	0/0:11,0:11:17.96:0,18,186	0/0:7,0:7:8.84:0,9,145	0/0:2,0:2:3.01:0,3,40	0/0:8,2:11:9.20:0,9,329	0/0:20,0:20:14.99:0,15,177	0/0:11,0:10:3.88:0,4,31	1/1:9,9:19:25.06:391,25,0	0/0:11,0:11:9.03:0,9,110	0/0:6,0:6:6.02:0,6,71	0/0:15,0:15:18:0,18,196	0/0:10,0:10:30.10:0,30,457	0/0:7,0:7:18.06:0,18,275	./.
chr10	81829932	.	CTAAT	C	1148.39	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.211;DP=548;FS=1.733;HRun=0;HaplotypeScore=90.5386;InbreedingCoeff=0.8984;MQ=91.16;MQ0=0;MQRankSum=-5.048;QD=42.53;ReadPosRankSum=-3.087;VQSLOD=3.1369;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39.13:0,39,1023	0/0:2,0:2:6.02:0,6,162	0/0:19,0:19:57.18:0,57,1229	0/0:24,0:25:53.67:0,54,1177	0/0:27,0:27:81.28:0,81,2187	0/0:19,0:19:57.20:0,57,1539	0/0:19,0:19:57.20:0,57,1505	1/1:3,24:27:72.20:1243,72,0	0/0:24,0:24:72.25:0,72,1906	0/0:30,0:30:87.29:0,87,2259	0/0:22,0:22:66.23:0,66,1766	0/0:26,0:26:78.27:0,78,2069	0/0:19,0:19:57.20:0,57,1488	0/0:17,0:17:51.18:0,51,1377	0/0:21,0:21:63.20:0,63,1634	0/0:14,0:14:39.13:0,39,1053	0/0:22,0:22:66.23:0,66,1746	0/0:8,0:8:21.07:0,21,566	0/0:20,0:20:60.18:0,60,1511	0/0:31,0:31:84.29:0,84,2270	0/0:29,0:29:78.27:0,78,2106	0/0:13,0:13:36.12:0,36,935	0/0:20,0:20:60.21:0,60,1581	0/0:15,0:15:39.13:0,39,1053	0/0:14,0:14:42.14:0,42,1093	0/0:24,0:24:72.24:0,72,1887	0/0:18,0:17:54.17:0,54,1402	0/0:9,0:9:21.07:0,21,567
chr10	81830793	.	G	GT	1433.23	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.966;DP=730;FS=1.348;HRun=1;HaplotypeScore=71.5204;InbreedingCoeff=0.9929;MQ=81.77;MQ0=0;MQRankSum=-2.904;QD=34.96;ReadPosRankSum=-0.191;VQSLOD=3.3914;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:41:99:1528,102,0	0/0:11,0:11:30.10:0,30,389	0/0:13,0:13:24.04:0,24,353	0/0:26,0:26:33.33:0,33,666	0/0:38,0:38:99:0,108,1366	0/0:23,0:23:69.21:0,69,882	0/0:20,0:20:57.19:0,57,739	0/0:30,0:30:90.27:0,90,1133	0/0:24,0:24:69.20:0,69,868	0/0:38,0:38:99:0,111,1427	0/0:36,0:36:99:0,108,1382	0/0:34,0:34:99:0,102,1283	0/0:19,0:19:57.18:0,57,736	0/0:23,0:23:66.20:0,66,839	0/0:31,0:31:90.29:0,90,1167	0/0:34,0:34:93.30:0,93,1207	0/0:21,0:21:63.17:0,63,786	0/0:7,0:7:21.05:0,21,257	0/0:15,0:15:45.14:0,45,570	0/0:49,0:49:99:0,147,1906	0/0:27,0:27:81.26:0,81,1050	0/0:21,0:21:60.19:0,60,778	0/0:23,0:23:69.22:0,69,880	0/0:28,0:28:84.27:0,84,1090	0/0:28,0:28:84.26:0,84,1076	0/0:26,0:26:75.24:0,75,968	0/0:33,0:33:93.30:0,93,1205	0/0:11,0:11:33.11:0,33,428
chr10	81831147	.	CA	C	11922.51	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=10.858;DP=739;FS=0.662;HRun=8;HaplotypeScore=85.6705;InbreedingCoeff=0.9946;MQ=79.09;MQ0=2;MQRankSum=-4.350;QD=24.13;ReadPosRankSum=2.594;VQSLOD=5.4759;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:27:63.09:608,63,0	0/0:18,0:18:54.11:0,54,615	0/0:35,0:27:13.18:0,13,462	0/0:41,0:29:35.56:0,36,338	1/1:4,23:27:63.09:608,63,0	0/0:42,0:42:99:0,108,1294	0/0:22,0:22:60.08:0,60,704	1/1:11,30:41:90:863,90,0	0/0:19,0:19:51.16:0,51,613	1/1:2,27:29:81.13:782,81,0	1/1:3,24:27:72.11:695,72,0	0/0:24,0:24:60.18:0,60,724	1/1:2,20:22:50.97:492,51,0	1/1:2,29:31:72.11:695,72,0	1/1:3,28:31:81.13:782,81,0	1/1:2,22:24:63.10:608,63,0	1/1:0,22:22:63.10:608,63,0	1/1:1,12:13:30.05:290,30,0	1/1:3,20:23:57.07:545,57,0	1/1:2,36:38:99:955,99,0	1/1:5,10:15:27.04:261,27,0	1/1:2,24:26:72.11:695,72,0	0/0:31,0:31:90.26:0,90,1074	0/0:12,0:12:30.08:0,30,352	1/1:2,21:23:60.09:579,60,0	1/1:1,25:26:75.12:724,75,0	1/1:4,39:43:99:956,99,0	1/1:0,6:6:18.03:174,18,0
chr10	81834323	.	TTACTACTAC	T	2836.53	PASS	AB=1.000;AC=23;AF=0.442;AN=52;BaseQRankSum=-2.171;DP=151;FS=4.725;HRun=0;HaplotypeScore=56.5026;InbreedingCoeff=0.3373;MQ=51.10;MQ0=2;MQRankSum=-3.258;QD=27.27;ReadPosRankSum=-0.301;VQSLOD=2.3853;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:14.97:259,15,0	0/0:2,0:2:6.02:0,6,283	0/0:3,0:2:6.02:0,6,202	0/0:3,0:2:6.02:0,6,201	./.	0/0:12,0:14:39.13:0,39,1173	0/0:1,0:1:3.01:0,3,74	0/1:27,0:25:11.99:833,0,12	0/0:4,0:5:15.05:0,15,457	1/1:1,5:6:9.03:199,9,0	1/1:0,5:5:6.02:120,6,0	0/0:4,0:5:12.04:0,12,342	0/0:3,0:3:8.98:0,9,167	0/0:5,0:5:14.97:0,15,460	1/1:1,0:1:3.01:81,3,0	1/1:5,0:4:9.01:111,9,0	0/1:13,0:13:21.78:389,0,22	0/1:10,0:10:17.76:216,0,18	1/1:2,0:2:3:63,3,0	./.	1/1:1,0:1:3.01:59,3,0	0/0:2,0:2:2.94:0,3,18	0/0:2,0:2:6.02:0,6,147	0/0:2,0:2:6.02:0,6,142	1/1:3,0:3:6.01:110,6,0	1/1:2,2:4:11.77:172,12,0	0/1:11,0:11:19.64:316,0,20	0/1:6,0:6:38.83:80,0,39
chr10	81834327	.	TACTAC	T	1442.14	PASS	AB=0.862;AC=23;AF=0.426;AN=54;BaseQRankSum=4.651;DP=151;FS=6.571;HRun=0;HaplotypeScore=47.6224;InbreedingCoeff=0.3702;MQ=66.41;MQ0=2;MQRankSum=-2.313;QD=15.18;ReadPosRankSum=1.621;VQSLOD=1.3600;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,1:7:13.90:85,14,0	0/0:2,0:2:6.02:0,6,200	0/0:4,0:3:9.03:0,9,270	0/0:7,0:6:18.06:0,18,471	./.	0/0:15,0:15:45.15:0,45,1163	0/0:1,0:1:3.01:0,3,82	0/1:24,0:22:99:319,0,172	0/0:5,0:5:15.05:0,15,407	1/1:5,0:5:8.76:74,9,0	1/1:5,0:5:5.88:36,6,0	0/0:5,0:5:12.04:0,12,330	0/0:3,0:3:9.03:0,9,158	0/0:6,0:6:18.06:0,18,435	1/1:2,0:2:5.23:46,5,0	1/1:1,2:3:9.03:124,9,0	1/1:8,4:12:4.13:211,4,0	0/1:7,3:10:20.36:177,0,20	0/1:2,0:2:15.03:15,0,31	0/0:1,0:1:0.89:0,1,2	1/1:1,0:1:2.92:17,3,0	0/0:3,0:3:3.01:0,3,38	0/0:2,0:2:6.02:0,6,167	0/0:2,0:2:6.02:0,6,165	1/1:2,1:3:8.76:97,9,0	1/1:3,1:4:11.77:121,12,0	0/1:5,2:10:44.29:180,0,44	0/1:6,1:7:26.85:115,0,27
chr10	81834597	.	TTC	T	112.98	PASS	AB=0.928;AC=10;AF=0.179;AN=56;BaseQRankSum=7.081;DP=261;FS=1.771;HRun=0;HaplotypeScore=39.1801;InbreedingCoeff=-0.0945;MQ=48.75;MQ0=3;MQRankSum=-0.432;QD=1.34;ReadPosRankSum=2.639;VQSLOD=1.0519;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:11:9.89:0,10,152	0/0:3,0:3:9:0,9,95	0/0:12,0:6:13.24:0,13,128	0/0:11,0:5:1.21:0,1,35	0/0:17,0:17:10.11:0,10,70	0/1:6,1:7:41.97:42,0,47	0/0:9,0:9:23.33:0,23,205	0/0:10,0:9:23.81:0,24,171	0/1:9,2:11:37.89:77,0,38	0/0:14,0:13:28.09:0,28,194	0/0:10,0:10:11.06:0,11,55	0/1:8,6:14:42.77:43,0,115	0/1:6,0:6:4.99:5,0,40	0/0:11,0:11:0.29:0,0,93	0/1:15,0:15:1.24:1,0,125	0/0:11,0:11:22.57:0,23,177	0/0:6,0:6:4.87:0,5,66	1/1:1,0:1:2.97:20,3,0	0/0:9,0:7:20.78:0,21,142	0/0:7,0:7:11.63:0,12,66	0/0:6,0:6:11.10:0,11,91	0/0:11,0:11:8.70:0,9,49	0/1:7,0:7:4.84:5,0,49	0/1:4,0:4:11.88:12,0,17	0/0:5,0:5:4.82:0,5,61	0/0:10,0:10:9.08:0,9,139	0/1:19,0:19:34.39:34,0,144	0/0:3,0:2:5.95:0,6,42
chr10	81836387	.	TC	T	6154.49	PASS	AB=0.847;AC=53;AF=0.946;AN=56;BaseQRankSum=2.604;DP=411;FS=11.396;HRun=2;HaplotypeScore=108.8250;InbreedingCoeff=-0.0729;MQ=55.87;MQ0=0;MQRankSum=1.954;QD=14.97;ReadPosRankSum=5.295;VQSLOD=3.5607;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:41.11:259,41,0	1/1:5,0:5:11.95:92,12,0	1/1:6,0:6:15.08:60,15,0	0/1:7,0:7:26.77:51,0,27	1/1:28,0:28:71.03:504,71,0	1/1:21,0:21:56.12:384,56,0	1/1:10,0:10:26.42:170,26,0	1/1:24,0:24:49.39:342,49,0	1/1:13,0:13:38.42:267,38,0	1/1:20,0:20:58.34:365,58,0	1/1:14,0:14:35.45:248,35,0	1/1:9,0:9:6.62:138,7,0	0/1:3,17:20:25.26:25,0,48	1/1:14,0:14:12.23:162,12,0	0/1:12,0:12:4.39:169,0,4	1/1:13,0:13:35.35:235,35,0	1/1:15,0:15:41.33:280,41,0	1/1:11,0:11:26.54:174,27,0	1/1:11,0:11:6.37:119,6,0	1/1:26,0:26:53.77:447,54,0	1/1:5,0:5:14.57:83,15,0	1/1:19,0:19:50.01:333,50,0	1/1:20,0:20:58.97:399,59,0	1/1:3,0:3:2.99:23,3,0	1/1:0,26:26:3.01:37,3,0	1/1:17,0:17:49.96:323,50,0	1/1:17,0:17:47.67:361,48,0	1/1:6,0:6:17.55:105,18,0
chr10	81837604	.	TTC	T	2826	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.685;DP=651;FS=6.808;HRun=0;HaplotypeScore=80.3573;InbreedingCoeff=0.9727;MQ=83.15;MQ0=0;MQRankSum=-3.324;QD=36.70;ReadPosRankSum=1.684;VQSLOD=5.7664;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,2469	0/0:14,0:14:42.10:0,42,662	0/0:25,0:25:69.07:0,69,1032	0/0:24,0:24:58.54:0,59,978	0/0:22,0:22:43.31:0,43,1098	0/0:31,0:31:93.29:0,93,1625	0/0:7,0:7:21.06:0,21,348	0/0:35,0:35:99:0,99,1769	0/0:14,0:14:42.12:0,42,708	0/0:37,0:37:99:0,111,1977	0/0:28,0:28:84.24:0,84,1442	0/0:21,0:21:63.20:0,63,1109	1/1:0,25:25:69.23:1014,69,0	1/1:2,21:23:57.19:838,57,0	0/0:17,0:17:48.16:0,48,878	0/0:23,0:22:69.22:0,69,1232	0/0:30,0:30:90.09:0,90,1540	0/0:5,0:5:15.05:0,15,273	0/0:30,0:30:87.26:0,87,1456	0/0:31,0:31:90.31:0,90,1612	0/0:21,0:21:63.17:0,63,1063	1/1:1,28:29:81.14:1117,81,0	0/0:19,0:19:54.19:0,54,988	0/0:16,0:16:48.13:0,48,811	0/0:26,0:26:72.25:0,72,1318	0/0:32,0:31:96.32:0,96,1728	0/0:16,0:16:48.14:0,48,795	0/0:3,0:3:9.03:0,9,164
chr10	81838115	.	T	TC	17404.89	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=6.039;DP=647;FS=3.237;HRun=3;HaplotypeScore=83.3817;InbreedingCoeff=0.9973;MQ=89.80;MQ0=0;MQRankSum=-4.335;QD=37.92;ReadPosRankSum=4.518;VQSLOD=4.9073;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:38:93.31:1339,93,0	0/0:12,0:12:36.11:0,36,446	0/0:26,0:26:75.22:0,75,908	0/0:22,0:22:66.18:0,66,785	1/1:3,25:28:63.21:900,63,0	0/0:27,0:27:75.24:0,75,930	0/0:17,0:17:51.16:0,51,632	1/1:3,25:28:75.23:1057,75,0	0/0:22,0:22:63.18:0,63,767	1/1:2,22:24:66.22:950,66,0	1/1:3,19:22:54.18:777,54,0	0/0:21,0:21:60.18:0,60,731	1/1:3,26:29:78.26:1113,78,0	1/1:0,25:25:72.24:1037,72,0	1/1:1,26:27:72.24:1037,72,0	1/1:1,24:25:66.22:951,66,0	1/1:0,23:23:66.22:951,66,0	1/1:1,7:8:15.05:216,15,0	1/1:1,25:26:72.24:1037,72,0	1/1:1,23:24:66.22:943,66,0	1/1:2,25:27:75.25:1080,75,0	1/1:0,19:19:45.15:648,45,0	0/0:19,0:19:57.18:0,57,705	0/0:22,0:22:63.20:0,63,781	1/1:0,22:22:57.19:821,57,0	1/1:2,27:29:81.27:1165,81,0	1/1:0,25:25:69.23:994,69,0	1/1:1,9:10:27.09:389,27,0
chr10	81838764	.	T	TACACACACACAC	8114.86	PASS	AC=34;AF=0.630;AN=54;BaseQRankSum=-6.174;DP=581;FS=0.000;HRun=0;HaplotypeScore=188.7615;InbreedingCoeff=0.8178;MQ=53.40;MQ0=4;MQRankSum=-1.968;QD=20.54;ReadPosRankSum=-2.372;VQSLOD=3.6782;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:14.64:291,15,0	0/0:8,0:8:18.06:0,18,575	0/0:15,0:14:9.03:0,9,135	0/0:25,0:19:3.01:0,3,81	1/1:7,7:25:11.36:640,11,0	0/0:7,0:20:24.08:0,24,637	0/0:8,0:18:14.98:0,15,353	0/0:25,0:29:22.26:0,22,199	0/0:6,0:19:27.09:0,27,667	1/1:29,0:29:63.18:1864,63,0	1/1:7,11:26:3.01:128,3,0	0/0:2,0:13:30.09:0,30,667	1/1:28,0:28:31.95:295,32,0	1/1:24,0:24:26.45:241,26,0	1/1:12,8:26:5.98:350,6,0	1/1:10,11:28:18.06:944,18,0	1/1:8,1:20:3.01:117,3,0	1/1:13,0:13:21.04:613,21,0	1/1:12,0:11:12.03:375,12,0	1/1:11,12:35:12:532,12,0	1/1:12,0:12:8.94:154,9,0	1/1:17,0:17:11.18:102,11,0	0/0:7,0:19:15.05:0,15,404	0/0:7,0:13:2.91:0,3,108	1/1:7,10:24:9.03:472,9,0	1/1:13,5:24:20.40:430,20,0	1/1:5,14:28:15.03:566,15,0	./.
chr10	81838794	.	C	CACACAT	4911.15	PASS	AB=1.000;AC=24;AF=0.444;AN=54;BaseQRankSum=0.022;DP=566;FS=0.000;HRun=0;HaplotypeScore=137.7485;InbreedingCoeff=-0.1550;MQ=52.97;MQ0=7;MQRankSum=-4.002;QD=11.11;ReadPosRankSum=2.959;VQSLOD=3.6590;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:65.17:65,0,115	0/0:9,0:9:27.05:0,27,495	0/0:19,0:11:19.09:0,19,233	0/1:13,0:9:18.13:18,0,74	0/1:23,0:23:76.95:224,0,77	0/0:20,0:20:36.07:0,36,500	0/0:17,0:17:30.03:0,30,378	1/1:44,0:44:20.48:759,20,0	0/0:20,0:18:36.08:0,36,540	0/1:29,0:29:99:277,0,104	0/1:25,0:25:46.39:46,0,116	0/0:16,0:16:45.08:0,45,640	1/1:1,21:27:31.66:890,32,0	1/1:0,19:21:26.39:895,26,0	0/1:18,0:18:97.81:98,0,121	0/1:22,0:21:70.32:283,0,70	0/1:20,0:20:49.12:55,0,49	0/1:19,0:19:99:101,0,204	0/1:19,0:18:99:112,0,162	0/1:31,0:31:99:178,0,132	0/1:13,0:13:16.55:17,0,116	1/1:0,12:12:11.71:393,12,0	0/0:21,0:21:44.86:0,45,469	0/1:9,0:9:0:0,0,0	0/1:21,0:21:99:156,0,125	0/1:19,0:19:99:151,0,132	0/1:32,0:32:99:193,0,227	./.
chr10	81841727	.	AG	A	5596.22	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=7.465;DP=298;FS=2.072;HRun=1;HaplotypeScore=38.8396;InbreedingCoeff=0.9447;MQ=46.36;MQ0=2;MQRankSum=-1.515;QD=37.06;ReadPosRankSum=2.904;VQSLOD=4.7255;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:30.10:403,30,0	0/0:6,0:6:18.06:0,18,287	0/0:20,0:12:36.11:0,36,535	0/0:14,0:6:17.50:0,18,306	1/1:0,12:12:30.09:410,30,0	0/0:7,0:7:21.07:0,21,325	0/0:15,0:15:39.13:0,39,617	0/0:14,0:14:39.13:0,39,587	0/0:10,0:8:21.07:0,21,335	1/1:0,23:23:69.23:962,69,0	1/1:0,7:7:21.07:275,21,0	0/0:6,0:6:15.05:0,15,239	0/0:11,0:11:30.10:0,30,459	0/0:9,0:9:24.08:0,24,367	1/1:0,13:13:30.10:419,30,0	1/1:1,9:10:24.08:329,24,0	1/1:0,10:10:30.10:418,30,0	1/1:0,8:8:21.07:293,21,0	1/1:0,3:3:6.02:84,6,0	1/1:0,12:12:33.11:446,33,0	1/1:0,9:9:17.97:226,18,0	0/0:19,0:19:54.18:0,54,847	0/0:11,0:11:30.10:0,30,476	0/0:5,0:5:9.03:0,9,137	1/1:0,10:10:30.10:410,30,0	1/1:0,10:10:27.09:377,27,0	1/1:0,12:12:36.12:502,36,0	1/1:0,1:1:3.01:42,3,0
chr10	81841852	.	GGAGAGAGAGAGAGAGAGA	G	616.78	PASS	AB=0.923;AC=8;AF=0.190;AN=42;BaseQRankSum=2.027;DP=458;FS=1.750;HRun=0;HaplotypeScore=202.5697;InbreedingCoeff=0.5267;MQ=66.13;MQ0=10;MQRankSum=-1.235;QD=9.21;ReadPosRankSum=2.246;VQSLOD=2.8605;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:21.54:0,22,731	0/0:9,0:9:12.04:0,12,293	./.	./.	./.	./.	0/0:10,0:10:20.90:0,21,414	0/0:27,0:27:18.05:0,18,424	1/1:11,0:11:6.02:270,6,0	0/0:11,0:10:15.05:0,15,511	./.	1/1:12,0:14:9.03:307,9,0	0/0:15,0:16:27.09:0,27,1291	0/0:9,0:11:18.06:0,18,613	0/0:12,0:11:3.01:0,3,73	0/0:15,0:14:9.02:0,9,186	0/1:20,0:20:14.05:14,0,1221	0/0:8,0:8:3.01:0,3,187	0/0:22,0:22:16.40:0,16,416	0/0:15,0:15:1.25:0,1,3	0/0:25,0:25:20.10:0,20,903	0/0:13,0:13:24.08:0,24,939	1/1:7,2:9:2.99:140,3,0	0/1:9,2:11:0:0,0,0	0/0:16,0:16:0.47:0,0,2	0/0:18,0:18:27.09:0,27,1091	./.	./.
chr10	81841874	.	A	AGGGAGG	1924.16	PASS	AB=0.928;AC=18;AF=0.321;AN=56;BaseQRankSum=5.442;DP=392;FS=7.490;HRun=0;HaplotypeScore=112.7612;InbreedingCoeff=0.2031;MQ=46.28;MQ0=11;MQRankSum=-2.660;QD=10.13;ReadPosRankSum=1.018;VQSLOD=1.8883;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:28:25.20:336,0,25	0/0:7,0:7:12.04:0,12,167	0/0:7,0:4:9.01:0,9,99	0/0:29,0:13:20.30:0,20,266	0/1:8,0:6:0:0,0,0	0/0:15,0:15:23.73:0,24,318	0/0:19,0:19:41.69:0,42,628	0/0:22,0:21:61.05:0,61,842	0/0:15,0:12:26.57:0,27,370	0/1:13,0:12:56.89:174,0,57	1/1:4,0:4:5.98:68,6,0	0/0:13,0:13:28.11:0,28,466	0/0:20,0:20:45.95:0,46,598	0/0:10,0:10:20.90:0,21,275	0/1:10,4:16:12.14:12,0,30	1/1:11,0:10:10.26:147,10,0	0/1:21,0:20:66.23:482,0,66	0/1:6,0:6:1.07:135,0,1	0/1:15,0:15:99:109,0,246	1/1:11,0:11:5.51:60,6,0	0/1:19,0:20:11.92:306,0,12	0/0:16,0:16:30.10:0,30,486	0/0:10,0:10:17.36:0,17,211	0/0:12,0:12:14.18:0,14,145	0/1:6,7:16:6.48:43,0,6	0/1:15,0:15:99:199,0,179	0/0:7,0:7:11.50:0,12,77	1/1:3,0:2:2.94:18,3,0
chr10	81841908	.	AAT	A	4897.03	PASS	AB=0.694;AC=24;AF=0.462;AN=52;BaseQRankSum=4.224;DP=430;FS=20.002;HRun=0;HaplotypeScore=82.6004;InbreedingCoeff=0.8613;MQ=76.15;MQ0=2;MQRankSum=-1.480;QD=27.67;ReadPosRankSum=3.155;VQSLOD=4.4679;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:24,1:25:39.19:526,39,0	0/0:7,0:6:9.01:0,9,153	0/0:31,0:23:29.67:0,30,897	0/0:45,0:26:41.46:0,41,807	0/1:0,9:9:0:0,0,0	0/0:9,0:9:27.09:0,27,389	0/0:21,0:21:58.27:0,58,882	0/0:33,0:33:76.04:0,76,1360	0/0:17,0:15:39.57:0,40,508	1/1:1,13:14:36.11:496,36,0	./.	0/0:7,0:7:17.05:0,17,196	0/0:12,0:12:31.65:0,32,453	0/0:14,0:14:36.12:0,36,572	1/1:17,0:17:24.07:314,24,0	0/1:14,2:16:10.51:461,0,11	1/1:15,2:17:41.96:512,42,0	1/1:7,0:7:15.01:202,15,0	1/1:3,12:14:36.09:521,36,0	./.	1/1:16,0:16:30.53:409,31,0	0/0:16,0:16:42.14:0,42,661	0/0:11,0:11:28.31:0,28,358	0/0:18,0:18:29.99:0,30,468	1/1:9,0:9:15.05:214,15,0	1/1:0,14:14:42.10:575,42,0	1/1:17,0:17:48.14:622,48,0	1/1:1,0:1:3.01:44,3,0
chr10	81842102	.	C	CT	11373.40	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=19.073;DP=630;FS=21.441;HRun=1;HaplotypeScore=143.6240;InbreedingCoeff=0.9565;MQ=79.65;MQ0=0;MQRankSum=-16.007;QD=36.34;ReadPosRankSum=-0.822;VQSLOD=2.4613;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,31:35:93.06:1333,93,0	0/0:10,0:10:30.10:0,30,389	0/0:29,0:29:84.14:0,84,1035	0/0:30,0:30:76.82:0,77,919	1/1:4,18:22:45.10:627,45,0	0/0:22,0:22:66.21:0,66,857	0/0:40,0:40:99:0,120,1530	0/0:22,0:22:54.17:0,54,701	0/0:30,0:30:84.27:0,84,1090	1/1:4,20:24:60.20:899,60,0	1/1:0,18:18:54.18:808,54,0	0/0:29,0:29:81.26:0,81,1050	0/0:24,0:24:72.23:0,72,935	0/0:19,0:19:51.15:0,51,648	1/1:2,29:31:84.16:1165,84,0	1/1:4,23:27:0.35:999,0,0	1/1:7,24:31:72.10:980,72,0	1/1:2,6:8:18.03:245,18,0	1/1:2,13:15:39.13:584,39,0	1/1:2,18:20:54.16:768,54,0	1/1:1,18:19:47.99:618,48,0	0/0:23,0:23:63.20:0,63,818	0/0:20,0:20:60.20:0,60,778	0/0:19,0:19:57.16:0,57,724	1/1:3,18:21:48.12:693,48,0	1/1:1,14:15:45.12:650,45,0	1/1:0,20:20:60.16:869,60,0	1/1:4,3:7:9.03:135,9,0
chr10	81842121	.	AC	A	9781.35	PASS	AB=0.523;AC=29;AF=0.518;AN=56;BaseQRankSum=19.264;DP=641;FS=38.301;HRun=3;HaplotypeScore=137.5058;InbreedingCoeff=0.9285;MQ=87.82;MQ0=0;MQRankSum=-14.796;QD=31.15;ReadPosRankSum=1.530;VQSLOD=1.9016;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,33:37:84.26:1031,84,0	0/0:7,0:7:21.07:0,21,302	0/0:36,0:36:99:0,105,1364	0/0:30,0:30:81.24:0,81,1065	1/1:2,19:21:44.82:448,45,0	0/0:21,0:21:60.09:0,60,798	0/0:43,0:43:99:0,126,1776	0/0:15,0:15:36.11:0,36,501	0/0:33,0:33:93.28:0,93,1305	1/1:1,25:26:69.18:835,69,0	1/1:1,17:18:54.04:625,54,0	0/0:28,0:28:84.27:0,84,1180	0/0:29,0:29:84.18:0,84,1141	0/0:21,0:21:63.20:0,63,881	1/1:2,30:32:96.18:1133,96,0	0/1:2,21:23:17.17:709,0,17	1/1:2,27:29:71.87:788,72,0	1/1:0,10:10:27.08:332,27,0	1/1:4,8:12:30.08:349,30,0	1/1:1,18:19:54.17:667,54,0	1/1:2,16:18:41.79:409,42,0	0/0:24,0:24:72.23:0,72,1009	0/0:23,0:23:60.48:0,60,810	0/0:17,0:17:45.13:0,45,626	1/1:0,23:23:66.21:816,66,0	1/1:0,17:17:51.12:613,51,0	1/1:1,21:22:63.19:766,63,0	1/1:0,7:7:21.07:260,21,0
chr10	81842517	.	TCAC	T	5468.14	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=10.580;DP=635;FS=10.258;HRun=0;HaplotypeScore=172.5251;InbreedingCoeff=0.5934;MQ=76.10;MQ0=0;MQRankSum=-6.954;QD=15.36;ReadPosRankSum=6.711;VQSLOD=3.1701;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:37.79:220,0,38	0/0:7,0:7:18.06:0,18,392	0/0:26,0:25:42.93:0,43,1052	0/0:13,0:13:15.27:0,15,505	1/1:21,2:23:39.79:476,40,0	0/0:35,0:35:92.99:0,93,889	0/0:17,0:16:47.98:0,48,949	0/0:34,0:34:90.39:0,90,935	0/0:23,0:23:62.42:0,62,568	1/1:25,0:25:69.81:466,70,0	1/1:24,1:25:14.46:386,14,0	0/0:19,0:19:50.75:0,51,432	0/0:14,0:14:34.42:0,34,332	0/0:18,0:18:48:0,48,445	1/1:28,0:28:66.58:473,67,0	1/1:22,0:22:61.99:390,62,0	0/1:20,0:20:42.14:255,0,42	0/1:14,0:14:7.19:177,0,7	0/1:14,0:14:3.23:194,0,3	1/1:32,1:33:23.93:516,24,0	1/1:26,0:26:22.14:256,22,0	0/0:24,0:24:65.94:0,66,592	0/0:28,0:28:76.38:0,76,683	0/0:21,0:21:54.82:0,55,535	1/1:24,0:24:49.54:433,50,0	0/1:30,0:30:97.52:362,0,98	0/1:38,0:38:24.36:591,0,24	1/1:15,0:15:41.47:271,41,0
chr10	81842518	.	CA	C	752.71	PASS	AB=0.942;AC=12;AF=0.214;AN=56;BaseQRankSum=-6.746;DP=638;FS=91.468;HRun=1;HaplotypeScore=165.5163;InbreedingCoeff=0.1748;MQ=76.68;MQ0=0;MQRankSum=3.291;QD=3.24;ReadPosRankSum=1.443;VQSLOD=-0.6969;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:50.35:0,50,282	0/0:7,0:7:18.06:0,18,250	0/0:25,1:25:40.47:0,40,735	0/1:14,2:15:19.97:20,0,299	0/0:23,0:23:17.61:0,18,161	0/1:32,2:34:20.77:118,0,21	0/0:17,0:16:47.95:0,48,575	0/1:33,0:33:11.54:12,0,261	0/1:21,2:23:6.87:119,0,7	0/0:27,0:27:64.49:0,64,345	0/0:25,0:25:33.88:0,34,248	1/1:16,3:19:12.83:155,13,0	0/1:13,1:14:22.16:70,0,22	0/1:18,1:19:39.07:59,0,39	0/0:27,0:27:59.73:0,60,294	0/0:23,0:23:57.75:0,58,298	0/0:20,0:20:48.07:0,48,255	0/0:14,0:14:32.86:0,33,164	0/0:14,0:14:27.25:0,27,195	0/0:31,0:31:64.23:0,64,382	0/0:25,0:25:45.75:0,46,246	1/1:22,2:24:34.24:159,34,0	0/1:25,3:28:91.37:157,0,91	0/1:22,0:22:47.72:48,0,60	0/0:25,0:25:49.22:0,49,234	0/0:30,0:30:76.90:0,77,457	0/0:38,0:38:86.72:0,87,424	0/0:15,0:15:39.72:0,40,197
chr10	81842519	.	ACCC	A	12051.41	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-4.860;DP=633;FS=5.418;HRun=9;HaplotypeScore=151.3393;InbreedingCoeff=0.9987;MQ=77.42;MQ0=0;MQRankSum=-5.429;QD=34.43;ReadPosRankSum=4.141;VQSLOD=2.8243;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:18:42.08:572,42,0	0/0:7,0:7:18.05:0,18,344	0/0:27,0:26:45.55:0,46,840	0/0:16,0:15:30.49:0,30,495	1/1:4,19:23:60.13:823,60,0	0/0:4,0:34:92.67:0,93,727	0/0:17,0:16:42.13:0,42,828	0/0:11,0:33:74.45:0,74,568	0/0:4,0:23:59.79:0,60,470	1/1:0,27:27:78.22:1054,78,0	1/1:3,22:25:57.19:807,57,0	0/0:4,0:19:47.82:0,48,374	0/0:3,0:14:35.85:0,36,278	0/0:4,0:19:41.85:0,42,329	1/1:0,27:27:69.22:962,69,0	1/1:0,23:23:63.21:889,63,0	1/1:4,16:20:42.13:596,42,0	1/1:2,12:14:30.10:426,30,0	1/1:1,13:14:36.10:492,36,0	1/1:1,29:30:81.20:1108,81,0	1/1:1,22:23:44.98:639,45,0	0/0:2,0:24:65.76:0,66,511	0/0:10,0:28:68.75:0,69,537	0/0:4,0:22:50.80:0,51,396	1/1:1,24:25:60.20:851,60,0	1/1:6,23:29:69.20:962,69,0	1/1:5,32:37:90.28:1276,90,0	1/1:0,15:15:42.14:596,42,0
chr10	81843352	.	AT	A	211.68	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.073;DP=505;FS=6.479;HRun=7;HaplotypeScore=53.2333;InbreedingCoeff=0.9795;MQ=74.01;MQ0=0;MQRankSum=-1.274;QD=21.17;ReadPosRankSum=-1.019;VQSLOD=2.6074;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:42.09:0,42,510	0/0:13,0:13:36.12:0,36,452	0/0:7,0:7:17.98:0,18,180	0/0:10,0:11:19.71:0,20,263	0/0:42,0:42:99:0,120,1510	0/0:23,0:23:66.21:0,66,826	1/1:0,10:10:30.07:306,30,0	0/0:38,0:38:99:0,102,1283	0/0:15,0:15:45.14:0,45,564	0/0:25,0:25:66.21:0,66,830	0/0:18,0:18:51.15:0,51,629	0/0:12,0:12:33.11:0,33,415	0/0:15,0:15:39.12:0,39,490	0/0:17,0:17:42.13:0,42,528	0/0:19,0:19:45.13:0,45,553	0/0:18,0:18:51.16:0,51,630	0/0:10,0:10:30.05:0,30,360	0/0:12,0:12:33.11:0,33,415	0/0:16,0:16:42.13:0,42,522	0/0:26,0:26:78.24:0,78,970	0/0:13,0:13:27.09:0,27,340	0/0:16,0:16:48.14:0,48,591	0/0:26,0:26:63.19:0,63,779	0/0:7,0:7:21.02:0,21,246	0/0:19,0:19:51.16:0,51,642	0/0:18,0:18:45.14:0,45,566	0/0:31,0:31:84.25:0,84,1031	0/0:11,0:11:33.07:0,33,387
chr10	81843611	.	AT	A	625.78	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.040;DP=705;FS=0.000;HRun=1;HaplotypeScore=68.5854;InbreedingCoeff=0.9938;MQ=87.24;MQ0=0;MQRankSum=-1.698;QD=28.44;ReadPosRankSum=-0.392;VQSLOD=3.1804;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:45.09:721,45,0	0/0:8,0:8:24.08:0,24,384	0/0:26,0:26:60.33:0,60,1110	0/0:22,0:22:66.20:0,66,999	0/0:30,0:30:90.27:0,90,1390	0/0:23,0:23:69.24:0,69,1103	0/0:22,0:22:66.22:0,66,1049	0/0:38,0:38:99:0,111,1713	0/0:19,0:19:57.19:0,57,911	0/0:28,0:28:78.25:0,78,1203	0/0:23,0:23:66.22:0,66,1055	0/0:24,0:24:72.23:0,72,1127	0/0:37,0:37:99:0,111,1749	0/0:30,0:30:90.29:0,90,1410	0/0:44,0:44:99:0,132,2102	0/0:41,0:41:99:0,123,1933	0/0:19,0:19:54.18:0,54,859	0/0:7,0:7:21.07:0,21,334	0/0:22,0:22:66.17:0,66,1006	0/0:20,0:20:57.19:0,57,911	0/0:35,0:35:99:0,102,1606	0/0:18,0:18:54.18:0,54,861	0/0:12,0:12:36.12:0,36,569	0/0:16,0:16:48.16:0,48,767	0/0:20,0:20:60.20:0,60,959	0/0:33,0:33:99:0,99,1538	0/0:51,0:51:99:0,154,2440	0/0:15,0:15:45.15:0,45,719
chr10	81845429	.	C	CT	4191.82	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=8.819;DP=569;FS=2.650;HRun=9;HaplotypeScore=61.0860;InbreedingCoeff=0.9728;MQ=76.43;MQ0=0;MQRankSum=0.070;QD=25.10;ReadPosRankSum=1.248;VQSLOD=4.5583;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,23:29:39.79:643,40,0	0/0:15,0:15:41.99:0,42,365	0/0:12,0:11:27.43:0,27,227	0/0:11,0:11:9.78:0,10,145	0/0:32,0:32:65.53:0,66,653	1/1:5,19:25:24.91:486,25,0	0/0:15,0:15:32.99:0,33,286	0/0:31,1:34:39.85:0,40,552	1/1:4,13:17:36.07:387,36,0	0/0:28,0:28:71.97:0,72,625	0/0:24,0:25:62.02:0,62,527	1/1:6,19:25:37.11:629,37,0	1/1:1,17:18:45.12:498,45,0	1/1:0,15:15:42.11:465,42,0	0/0:22,0:23:68:0,68,574	0/0:22,0:22:56.97:0,57,491	0/0:19,0:19:53.73:0,54,455	0/0:10,0:10:18.97:0,19,178	0/0:20,0:22:53.47:0,53,446	0/0:26,0:26:68.98:0,69,599	0/0:15,0:15:38.97:0,39,338	1/1:2,7:9:24.02:249,24,0	1/1:3,20:23:37.12:638,37,0	1/1:0,6:6:18.05:199,18,0	0/0:27,0:27:71.97:0,72,623	0/0:36,0:36:89.97:0,90,779	0/0:26,1:27:41.78:0,42,588	0/0:3,0:3:6:0,6,52
chr10	81846203	.	A	ATTTG	5815	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-1.130;DP=481;FS=1.533;HRun=0;HaplotypeScore=86.2115;InbreedingCoeff=0.9672;MQ=68.01;MQ0=1;MQRankSum=-8.295;QD=55.91;ReadPosRankSum=1.435;VQSLOD=6.1082;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:51.17:0,51,882	0/0:7,0:7:15.03:0,15,233	0/0:18,0:19:39.11:0,39,605	0/0:12,0:12:24.07:0,24,353	0/0:24,0:24:60.12:0,60,963	1/1:3,14:20:39.13:947,39,0	0/0:17,0:17:48.14:0,48,794	0/0:34,0:34:63.15:0,63,1005	1/1:1,10:11:24.08:596,24,0	0/0:15,0:15:45.15:0,45,767	0/0:10,0:10:23.99:0,24,346	1/1:0,18:18:45.15:1128,45,0	1/1:5,12:18:36.12:894,36,0	1/1:1,17:18:51.18:1277,51,0	0/0:31,0:30:69.18:0,69,1138	0/0:29,0:29:75.25:0,75,1282	0/0:13,0:13:21.04:0,21,321	0/0:7,0:7:9.03:0,9,156	0/0:19,0:19:36.10:0,36,572	0/0:22,0:22:57.18:0,57,963	0/0:21,0:21:57.14:0,57,943	1/1:0,5:5:12.04:304,12,0	1/1:0,3:5:8.55:213,9,0	1/1:0,9:9:18.06:456,18,0	0/0:14,0:14:42.12:0,42,676	0/0:30,0:30:87.30:0,87,1504	0/0:25,0:25:51.16:0,51,846	0/0:6,0:6:18.06:0,18,313
chr10	81847446	.	TC	T	6961.19	PASS	AB=0.538;AC=15;AF=0.288;AN=52;BaseQRankSum=13.490;DP=714;FS=28.453;HRun=1;HaplotypeScore=73.4957;InbreedingCoeff=0.9097;MQ=51.18;MQ0=38;MQRankSum=6.043;QD=32.08;ReadPosRankSum=3.274;VQSLOD=3.1332;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:31:84.29:0,84,1295	0/0:8,0:7:21.07:0,21,328	./.	./.	0/0:33,0:28:75.22:0,75,1113	1/1:2,28:28:69.23:964,69,0	0/0:20,0:17:48.15:0,48,697	0/0:38,0:36:99:0,105,1577	1/1:2,27:28:78.26:1086,78,0	0/0:47,0:43:99:0,129,1963	0/0:32,0:26:78.09:0,78,1112	1/1:1,23:23:66.22:923,66,0	1/1:8,28:31:84.27:1160,84,0	1/1:1,27:26:66.22:923,66,0	0/0:25,0:22:66.21:0,66,1005	0/0:22,0:21:63.20:0,63,961	0/0:21,0:21:57.15:0,57,842	0/0:28,0:25:75.26:0,75,1169	0/0:21,0:18:54.16:0,54,819	0/0:38,0:33:96.24:0,96,1413	0/0:16,0:16:45.14:0,45,680	1/1:3,26:25:63.16:854,63,0	1/1:1,26:24:51.13:688,51,0	0/1:2,12:14:13.44:363,0,13	0/0:24,0:19:57.19:0,57,889	0/0:28,0:27:81.26:0,81,1225	0/0:38,0:38:99:0,108,1685	0/0:10,0:10:30.10:0,30,469
chr10	81847700	.	GT	G	4467.43	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.800;DP=636;FS=1.548;HRun=7;HaplotypeScore=70.6044;InbreedingCoeff=0.9994;MQ=63.74;MQ0=0;MQRankSum=0.910;QD=25.97;ReadPosRankSum=2.449;VQSLOD=5.6472;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:54.17:0,54,679	0/0:10,0:10:30.10:0,30,377	0/0:22,1:19:45.13:0,45,540	0/0:12,1:11:23.87:0,24,261	0/0:24,0:24:69.21:0,69,855	1/1:2,28:30:81.18:826,81,0	0/0:21,0:21:60.19:0,60,755	0/0:28,0:27:78.25:0,78,981	1/1:5,10:15:30.07:306,30,0	0/0:40,0:40:99:0,114,1413	0/0:31,0:31:87.27:0,87,1082	1/1:0,18:18:51.12:520,51,0	1/1:1,28:29:75.17:765,75,0	1/1:2,18:20:54.12:551,54,0	0/0:26,0:26:72.22:0,72,893	0/0:15,0:15:45.14:0,45,566	0/0:27,0:27:72.20:0,72,877	0/0:25,0:24:57.17:0,57,706	0/0:22,0:19:48.15:0,48,603	0/0:33,0:33:93.28:0,93,1157	0/0:22,0:22:60.19:0,60,755	1/1:2,16:18:42.09:428,42,0	1/1:1,19:20:54.12:550,54,0	1/1:1,21:22:51.11:520,51,0	0/0:27,0:27:72.19:0,72,887	0/0:24,0:24:63.20:0,63,792	0/0:23,0:23:63.18:0,63,778	0/0:11,0:11:33.09:0,33,402
chr10	81847736	.	TG	T	1103.92	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.896;DP=652;FS=0.000;HRun=1;HaplotypeScore=76.3818;InbreedingCoeff=0.9973;MQ=56.16;MQ0=3;MQRankSum=-2.623;QD=32.47;ReadPosRankSum=-4.522;VQSLOD=2.0696;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.21:0,69,1064	0/0:10,0:10:30.10:0,30,479	0/0:27,0:12:36.09:0,36,518	0/0:16,0:9:27.09:0,27,405	0/0:27,0:27:75.24:0,75,1157	0/0:26,0:26:78.25:0,78,1211	0/0:17,0:17:45.15:0,45,715	1/1:0,34:29:87.28:1199,87,0	0/0:14,0:14:42.13:0,42,645	0/0:39,0:39:99:0,117,1829	0/0:27,0:27:81.28:0,81,1294	0/0:18,0:18:51.16:0,51,792	0/0:29,0:29:84.29:0,84,1341	0/0:18,0:18:54.18:0,54,863	0/0:24,0:24:72.25:0,72,1149	0/0:20,0:20:60.20:0,60,959	0/0:16,0:16:48.16:0,48,767	0/0:27,0:27:81.26:0,81,1265	0/0:19,0:15:45.15:0,45,719	0/0:40,0:40:99:0,120,1871	0/0:26,0:26:78.27:0,78,1237	0/0:23,0:23:66.23:0,66,1052	0/0:18,0:18:54.17:0,54,827	0/0:22,0:22:57.19:0,57,911	0/0:32,0:32:96.33:0,96,1530	0/0:22,0:22:63.21:0,63,1007	0/0:28,0:28:84.27:0,84,1319	0/0:9,0:9:27.09:0,27,431
chr10	81848530	.	C	CTGTT	3876.64	PASS	AC=18;AF=0.333;AN=54;BaseQRankSum=5.760;DP=477;FS=2.657;HRun=0;HaplotypeScore=64.1560;InbreedingCoeff=0.9345;MQ=53.62;MQ0=6;MQRankSum=-10.229;QD=32.04;ReadPosRankSum=-2.366;VQSLOD=2.9744;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:54.19:0,54,1076	0/0:12,0:12:33.11:0,33,659	1/1:6,0:2:5.81:47,6,0	./.	0/0:23,0:23:66.23:0,66,1315	1/1:3,19:23:36.12:957,36,0	0/0:13,0:13:36.12:0,36,716	0/0:23,0:19:54.18:0,54,1053	1/1:4,17:19:27.09:753,27,0	0/0:25,0:25:72.25:0,72,1438	0/0:20,0:20:57.20:0,57,1128	1/1:1,7:8:12.04:335,12,0	1/1:2,14:15:21.07:586,21,0	1/1:3,9:11:15.05:418,15,0	0/0:19,0:18:57.20:0,57,1138	0/0:23,0:23:66.20:0,66,1246	0/0:19,0:19:45.61:0,46,864	0/0:11,0:11:30.10:0,30,596	0/0:18,0:17:51.17:0,51,974	0/0:28,0:28:84.27:0,84,1632	0/0:15,0:15:45.12:0,45,827	1/1:3,8:11:18.06:454,18,0	1/1:4,10:16:9.03:251,9,0	1/1:0,3:3:3.01:77,3,0	0/0:14,0:14:42.14:0,42,836	0/0:21,0:21:60.21:0,60,1195	0/0:30,0:30:90.31:0,90,1795	0/0:14,0:14:42.14:0,42,838
chr10	81849368	.	C	CT	6234.65	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.609;DP=668;FS=16.942;HRun=5;HaplotypeScore=88.0319;InbreedingCoeff=0.9999;MQ=63.07;MQ0=2;MQRankSum=0.844;QD=36.25;ReadPosRankSum=1.005;VQSLOD=2.9841;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:57.11:0,57,603	0/0:14,0:14:42.09:0,42,443	0/0:23,0:19:45.06:0,45,462	0/0:23,0:20:45.16:0,45,463	0/0:35,0:35:96.20:0,96,1014	1/1:0,26:26:75.24:987,75,0	0/0:18,0:18:39.07:0,39,409	0/0:24,0:24:66.16:0,66,709	1/1:2,21:23:57.18:750,57,0	0/0:31,0:31:90.23:0,90,967	0/0:23,0:23:45.11:0,45,484	1/1:2,17:19:48.16:632,48,0	1/1:2,24:26:72.20:929,72,0	1/1:2,22:24:66.21:868,66,0	0/0:19,0:19:54.14:0,54,580	0/0:24,0:24:69.17:0,69,742	0/0:23,0:22:63.16:0,63,677	0/0:21,0:21:57.14:0,57,613	0/0:20,0:18:51.09:0,51,535	0/0:34,0:34:96.23:0,96,1024	0/0:30,0:30:87.22:0,87,935	1/1:0,21:21:60.15:769,60,0	1/1:0,20:21:63.20:826,63,0	1/1:0,12:12:36.12:474,36,0	0/0:30,0:29:84.21:0,84,903	0/0:34,0:34:84.19:0,84,890	0/0:33,0:33:96.24:0,96,1032	0/0:13,0:13:33.08:0,33,355
chr10	81849614	.	A	AT	2719.25	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.406;DP=496;FS=2.625;HRun=8;HaplotypeScore=68.9920;InbreedingCoeff=0.9935;MQ=67.98;MQ0=0;MQRankSum=-0.572;QD=23.85;ReadPosRankSum=3.278;VQSLOD=4.5429;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:42.08:0,42,407	0/0:11,0:11:30.01:0,30,275	0/0:18,0:16:41.53:0,42,340	0/0:20,0:15:17.99:0,18,160	0/0:37,0:37:93.04:0,93,851	1/1:5,9:14:24.07:275,24,0	0/0:10,0:10:30.02:0,30,275	0/0:35,0:35:93.01:0,93,839	1/1:1,13:14:36.10:414,36,0	0/0:21,0:21:51.02:0,51,467	0/0:23,0:23:63.03:0,63,577	1/1:1,17:18:42.12:482,42,0	1/1:1,13:14:33.10:380,33,0	1/1:0,8:8:21.06:238,21,0	0/0:19,0:19:48:0,48,435	0/0:17,0:17:48.03:0,48,439	0/0:16,0:16:36.02:0,36,329	0/0:15,0:15:26.96:0,27,237	0/0:10,0:9:27.01:0,27,247	0/0:25,0:25:66.03:0,66,604	0/0:5,0:5:15.01:0,15,137	1/1:0,15:15:41.99:449,42,0	1/1:5,16:20:39.11:447,39,0	1/1:2,7:9:21.06:241,21,0	0/0:17,0:17:45.02:0,45,412	0/0:25,0:25:75.03:0,75,683	0/0:29,0:29:77.99:0,78,704	0/0:10,0:10:30.02:0,30,275
chr10	81850065	.	T	TA	6603.90	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.309;DP=611;FS=0.725;HRun=1;HaplotypeScore=96.3295;InbreedingCoeff=0.9996;MQ=57.83;MQ0=1;MQRankSum=-3.279;QD=36.49;ReadPosRankSum=1.652;VQSLOD=5.0759;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:59.87:0,60,759	0/0:12,0:12:36.11:0,36,455	0/0:22,0:15:45.09:0,45,546	0/0:15,0:15:45.14:0,45,577	0/0:32,0:32:87.28:0,87,1129	1/1:0,24:24:69.23:1033,69,0	0/0:10,0:10:27.09:0,27,351	0/0:30,0:30:84.24:0,84,1052	1/1:0,18:18:42.14:629,42,0	0/0:24,0:24:69.22:0,69,885	0/0:23,0:23:66.20:0,66,842	1/1:3,20:23:57.16:822,57,0	1/1:6,27:33:75.22:1099,75,0	1/1:1,12:13:36.12:539,36,0	0/0:19,0:18:45.15:0,45,584	0/0:19,0:18:51.17:0,51,662	0/0:24,0:23:69.16:0,69,860	0/0:22,0:22:63.20:0,63,817	0/0:21,0:20:54.17:0,54,688	0/0:29,0:29:84.25:0,84,1062	0/0:14,0:14:42.12:0,42,530	1/1:1,25:25:72.16:1049,72,0	1/1:3,21:24:60.16:873,60,0	1/1:0,19:19:39.09:559,39,0	0/0:21,0:21:57.16:0,57,712	0/0:24,0:24:72.23:0,72,935	0/0:31,0:31:83.95:0,84,1029	0/0:12,0:12:27.09:0,27,351
chr10	81851820	.	A	AT	5515.81	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-14.589;DP=681;FS=0.000;HRun=5;HaplotypeScore=61.6315;InbreedingCoeff=0.9843;MQ=56.69;MQ0=9;MQRankSum=4.439;QD=33.43;ReadPosRankSum=1.553;VQSLOD=5.1828;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:57.13:0,57,604	0/0:6,0:6:18.05:0,18,193	0/0:17,0:5:9.02:0,9,96	0/0:17,0:7:21.03:0,21,211	0/0:43,0:42:99:0,108,1160	1/1:0,18:18:54.18:710,54,0	0/0:12,0:12:33.08:0,33,354	0/0:28,0:28:66.14:0,66,690	1/1:1,21:22:63.20:827,63,0	0/0:34,0:34:93.22:0,93,990	0/0:33,0:33:99:0,99,1064	1/1:1,19:20:51.17:671,51,0	1/1:1,24:25:66:849,66,0	1/1:0,16:16:39.13:513,39,0	0/0:26,0:26:72.18:0,72,774	0/0:27,0:27:78.18:0,78,830	0/0:30,0:28:49.49:0,49,775	0/0:39,0:39:99:0,111,1156	0/0:24,0:23:66.17:0,66,708	0/0:33,0:33:93.23:0,93,999	0/0:21,0:21:57.14:0,57,612	1/1:4,17:21:48.16:632,48,0	1/1:3,24:27:63.20:829,63,0	1/1:3,13:16:14.13:485,14,0	0/0:25,0:25:75.15:0,75,783	0/0:34,0:34:90.21:0,90,959	0/0:35,0:35:96.23:0,96,1024	0/0:7,0:7:21.05:0,21,225
chr10	81855813	.	A	AACGGGGGAGGG	18109.77	PASS	AB=0.938;AC=17;AF=0.304;AN=56;BaseQRankSum=14.650;DP=670;FS=19.430;HRun=0;HaplotypeScore=217.9374;InbreedingCoeff=0.9067;MQ=74.24;MQ0=0;MQRankSum=-16.160;QD=95.31;ReadPosRankSum=0.272;VQSLOD=3.4865;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.27:0,78,2756	0/0:9,0:9:24.07:0,24,766	0/0:21,0:21:35.58:0,36,1651	0/0:8,0:8:21.07:0,21,555	0/0:23,0:23:69.22:0,69,2334	1/1:0,9:12:18.06:1044,18,0	0/0:37,0:37:99:0,105,2993	0/0:37,0:37:99:0,102,3323	1/1:6,11:19:36.12:1846,36,0	0/0:28,0:28:84.28:0,84,2833	0/0:26,0:26:75.24:0,75,2564	1/1:4,20:26:54.19:3046,54,0	1/1:10,10:23:39.06:1872,39,0	1/1:13,13:29:66.23:3538,66,0	0/0:26,0:26:78.27:0,78,2695	0/0:34,0:34:99:0,102,3638	0/0:30,0:30:84.21:0,84,2646	0/1:14,1:15:99:132,0,1220	0/0:20,0:20:54.17:0,54,1673	0/0:27,0:27:81.26:0,81,2725	0/0:33,0:33:99:0,99,3446	1/1:8,22:32:75.24:4036,75,0	1/1:3,14:20:32.73:1900,33,0	1/1:5,8:14:12.04:695,12,0	0/0:19,0:19:57.18:0,57,1908	0/0:26,0:26:78.26:0,78,2556	0/0:42,0:42:99:0,123,4084	0/0:6,0:6:18.06:0,18,653
chr10	81856321	.	C	CTT	7362.90	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-13.494;DP=689;FS=0.693;HRun=8;HaplotypeScore=77.7492;InbreedingCoeff=0.9286;MQ=76.01;MQ0=3;MQRankSum=-0.759;QD=31.87;ReadPosRankSum=3.111;VQSLOD=4.9758;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,105,1170	0/0:11,0:11:30.08:0,30,334	0/1:16,0:15:6.46:6,0,258	0/0:15,0:15:24.02:0,24,268	0/0:39,0:39:99:0,105,1170	1/1:4,28:35:73.20:1111,73,0	0/0:16,0:16:39.10:0,39,435	0/0:33,0:33:84.17:0,84,913	1/1:3,17:21:45.15:714,45,0	0/0:37,0:37:96.23:0,96,1060	0/0:22,0:22:60.16:0,60,669	1/1:4,21:27:56.16:827,56,0	1/1:7,27:34:59.69:913,60,0	1/1:3,27:30:78.27:1238,78,0	0/0:25,0:25:63.15:0,63,702	0/0:23,0:24:54.07:0,54,660	0/0:28,0:28:72.18:0,72,802	0/0:9,0:9:24.06:0,24,268	0/0:32,0:32:81.18:0,81,892	0/0:14,0:14:36.07:0,36,392	0/0:14,0:15:39.10:0,39,435	1/1:1,16:15:42.10:639,42,0	1/1:0,17:17:42.14:667,42,0	1/1:3,29:33:80.76:1247,81,0	0/0:20,0:20:57.15:0,57,635	0/0:29,0:29:81.19:0,81,893	0/0:40,0:40:99:0,111,1207	0/0:7,0:7:18.05:0,18,201
chr10	81856791	.	G	GCACACACACACA	12301.38	PASS	AB=0.652;AC=44;AF=0.815;AN=54;BaseQRankSum=-0.657;DP=874;FS=0.000;HRun=0;HaplotypeScore=299.2407;InbreedingCoeff=0.5764;MQ=40.21;MQ0=16;MQRankSum=-5.165;QD=17.55;ReadPosRankSum=0.017;VQSLOD=3.1594;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,8:23:0:0,0,0	1/1:7,0:15:1.97:95,2,0	0/0:41,0:14:15.04:0,15,291	0/0:62,0:21:14.72:0,15,448	1/1:15,15:37:0.47:1,0,0	1/1:28,0:35:18.74:585,19,0	0/0:9,0:28:16.19:0,16,732	1/1:17,0:39:70.27:1018,70,0	1/1:19,0:26:12.04:347,12,0	1/1:27,0:27:54.09:1667,54,0	0/1:11,4:31:0:0,0,0	1/1:18,0:33:14.15:437,14,0	1/1:23,0:33:41.69:1212,42,0	1/1:29,0:36:18.02:375,18,0	1/1:7,23:33:11.83:521,12,0	1/1:4,21:31:5.82:216,6,0	1/1:14,12:27:12.01:370,12,0	1/1:10,0:10:9:165,9,0	1/1:8,4:17:42.07:1194,42,0	1/1:7,18:33:2.48:69,2,0	1/1:22,28:60:2.82:38,3,0	0/0:30,0:36:0.15:0,0,1	1/1:27,0:32:3.48:47,3,0	1/1:12,0:16:3.48:125,3,0	1/1:13,17:36:2.78:53,3,0	1/1:14,3:33:72.19:2479,72,0	1/1:11,18:32:27.09:1287,27,0	./.
chr10	81856823	.	A	ACG	90.32	PASS	AB=0.971;AC=10;AF=0.179;AN=56;BaseQRankSum=10.039;DP=758;FS=8.773;HRun=0;HaplotypeScore=281.4091;InbreedingCoeff=0.2201;MQ=58.07;MQ0=4;MQRankSum=-8.116;QD=0.46;ReadPosRankSum=-10.461;VQSLOD=-0.6125;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:0:0,0,0	0/0:10,0:10:11.89:0,12,183	0/0:30,0:22:44.41:0,44,738	0/0:33,0:19:44.63:0,45,657	0/0:34,0:34:23.15:0,23,576	0/0:30,0:30:0.98:0,1,274	0/0:22,0:22:57.16:0,57,826	0/0:37,0:37:99:0,111,1593	0/1:29,2:31:60.63:61,0,194	0/0:22,0:22:56.66:0,57,791	0/0:24,0:24:33.11:0,33,505	0/1:31,2:33:98.27:98,0,212	0/0:37,2:39:16.38:0,16,785	0/1:26,0:26:15.89:16,0,412	0/0:41,0:41:49.93:0,50,986	0/0:30,0:30:14.73:0,15,480	0/0:20,0:20:30.02:0,30,405	0/0:10,0:10:20.90:0,21,289	0/0:18,0:18:42.13:0,42,593	0/0:35,0:35:54.11:0,54,720	0/0:50,0:47:27.16:0,27,414	1/1:21,1:22:2.74:12,3,0	1/1:23,0:23:2.74:12,3,0	0/1:15,1:16:10.85:11,0,11	0/1:26,0:26:3.58:4,0,312	0/0:39,0:39:99:0,100,1615	0/0:28,0:28:38.27:0,38,646	0/0:10,0:10:27.02:0,27,334
chr10	81856851	.	ATGTCCACAC	A	11239.18	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.606;DP=665;FS=2.733;HRun=0;HaplotypeScore=234.4800;InbreedingCoeff=0.9898;MQ=87.30;MQ0=0;MQRankSum=-15.295;QD=71.59;ReadPosRankSum=-2.577;VQSLOD=4.3081;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:30.02:0,30,1266	0/0:9,0:9:21.07:0,21,1021	0/0:37,0:37:98.93:0,99,4284	0/0:27,0:26:69.24:0,69,3164	0/0:31,0:31:75.26:0,75,3632	1/1:3,19:22:57.20:1745,57,0	0/0:19,0:19:51.18:0,51,2436	0/0:38,0:38:99:0,111,5116	1/1:7,16:23:48.16:1469,48,0	0/0:18,0:18:51.18:0,51,2481	0/0:19,0:19:54.19:0,54,2626	1/1:6,15:21:42.14:1232,42,0	1/1:2,24:26:75.26:2294,75,0	1/1:7,16:23:48.04:1469,48,0	0/0:39,0:39:93.25:0,93,4390	0/0:32,0:32:63.04:0,63,2916	0/0:25,0:25:60.21:0,60,2912	0/0:10,0:10:27.09:0,27,1243	0/0:27,0:27:78.26:0,78,3571	0/0:33,0:33:93.32:0,93,4475	0/0:39,0:37:63.22:0,63,3021	1/1:1,17:18:51.18:1561,51,0	1/1:2,14:16:39.13:1194,39,0	1/1:4,4:8:9.35:276,9,0	0/0:24,0:24:54.12:0,54,2492	0/0:37,0:37:99:0,105,4825	0/0:19,0:19:36.12:0,36,1749	0/0:11,0:11:33.11:0,33,1605
chr10	81856906	.	CTAA	C	8032.96	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.222;DP=689;FS=5.674;HRun=0;HaplotypeScore=128.4441;InbreedingCoeff=0.9992;MQ=85.44;MQ0=0;MQRankSum=-12.335;QD=43.90;ReadPosRankSum=3.627;VQSLOD=6.6933;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:42.14:0,42,959	0/0:11,0:11:33.11:0,33,760	0/0:29,0:29:87.27:0,87,1826	0/0:22,0:22:58:0,58,1228	0/0:29,0:29:87.27:0,87,1899	1/1:0,21:21:57.15:971,57,0	0/0:19,0:19:57.20:0,57,1338	0/0:33,0:33:96.28:0,96,2063	1/1:0,21:21:57.20:1004,57,0	0/0:35,0:35:99:0,105,2455	0/0:28,0:28:84.29:0,84,1966	1/1:2,19:21:54.12:887,54,0	1/1:1,23:24:60.14:993,60,0	1/1:0,22:22:54.19:951,54,0	0/0:44,0:44:99:0,126,2890	0/0:33,0:32:99:0,99,2198	0/0:24,0:24:69.19:0,69,1445	0/0:7,0:7:21.07:0,21,495	0/0:27,0:27:81.24:0,81,1765	0/0:39,0:39:99:0,117,2681	0/0:19,0:19:51.17:0,51,1144	1/1:1,31:32:81.28:1412,81,0	1/1:0,28:28:72.20:1233,72,0	1/1:2,12:14:33.11:581,33,0	0/0:29,0:29:87.29:0,87,1993	0/0:29,0:29:84.26:0,84,1766	0/0:24,0:23:72.25:0,72,1636	0/0:11,0:11:33.11:0,33,777
chr10	81857659	.	CT	C	7632.87	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-8.824;DP=653;FS=3.394;HRun=9;HaplotypeScore=115.8107;InbreedingCoeff=0.9776;MQ=71.18;MQ0=4;MQRankSum=0.299;QD=22.65;ReadPosRankSum=1.536;VQSLOD=4.3897;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:37:59.57:0,60,321	1/1:1,5:6:15.01:137,15,0	0/0:26,0:18:36.74:0,37,419	0/0:35,0:23:5.60:0,6,358	1/1:2,28:30:75.02:683,75,0	0/0:1,0:21:34.09:0,34,173	0/0:6,0:17:25.48:0,25,140	0/0:8,0:30:45.07:0,45,290	0/0:0,0:21:36.93:0,37,188	1/1:2,35:37:99:957,105,0	1/1:4,22:26:57:520,57,0	0/0:2,0:18:31:0,31,155	0/0:7,0:30:66.19:0,66,349	0/0:3,0:23:51.13:0,51,259	1/1:2,20:22:60.02:549,60,0	1/1:5,17:22:48.02:439,48,0	1/1:4,18:22:56.62:504,57,0	1/1:8,5:13:11.99:110,12,0	1/1:4,22:26:68.05:604,68,0	1/1:6,24:30:72.03:659,72,0	1/1:0,11:11:33.02:302,33,0	0/0:1,0:16:39.30:0,39,195	0/0:6,0:26:47.99:0,48,249	0/0:0,0:13:31.25:0,31,159	1/1:1,16:17:48.03:439,48,0	1/1:3,24:27:66.01:604,66,0	1/1:4,26:30:72.04:658,72,0	1/1:1,17:18:51.03:467,51,0
chr10	81858273	.	G	GT	14443.47	PASS	AB=0.638;AC=48;AF=0.857;AN=56;BaseQRankSum=-0.128;DP=594;FS=18.684;HRun=9;HaplotypeScore=104.0616;InbreedingCoeff=0.6692;MQ=74.38;MQ0=0;MQRankSum=-6.503;QD=25.98;ReadPosRankSum=5.297;VQSLOD=3.6832;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:31:81.05:877,81,0	1/1:2,9:11:27.07:299,27,0	0/0:12,0:12:32.98:0,33,282	0/0:14,0:14:33.80:0,34,273	1/1:6,36:42:96.15:1033,96,0	1/1:6,19:28:59.66:607,60,0	0/0:12,0:12:32.99:0,33,286	1/1:4,21:25:40.10:661,40,0	1/1:1,20:21:60.16:660,60,0	1/1:7,23:31:81.05:873,81,0	1/1:1,17:18:48.13:531,48,0	1/1:0,18:18:48.13:531,48,0	0/1:4,14:18:9.99:356,0,10	1/1:1,17:19:51.14:564,51,0	1/1:6,35:41:50.17:1010,50,0	1/1:3,21:24:57.15:631,57,0	1/1:3,20:23:60.16:664,60,0	1/1:1,16:17:39.11:431,39,0	1/1:3,19:22:57.12:618,57,0	1/1:4,23:27:43.10:691,43,0	1/1:0,9:9:21.06:232,21,0	1/1:0,13:14:38.94:412,39,0	1/1:3,11:14:1.02:240,1,0	1/1:2,13:15:33.09:365,33,0	1/1:1,33:34:87.24:962,87,0	1/1:4,13:17:39.11:431,39,0	1/1:8,23:32:49:738,49,0	0/1:3,2:5:20.04:27,0,20
chr10	81859087	.	ATGG	A	25792.61	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.702;DP=656;FS=0.614;HRun=0;HaplotypeScore=112.2619;InbreedingCoeff=0.9997;MQ=81.92;MQ0=0;MQRankSum=-10.297;QD=42.08;ReadPosRankSum=6.923;VQSLOD=6.0376;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:45.15:749,45,0	1/1:0,14:14:33.11:550,33,0	0/0:23,0:23:63.22:0,63,1396	0/0:20,0:20:51.17:0,51,1113	1/1:2,27:30:63.22:1049,63,0	1/1:0,25:25:66.23:1099,66,0	1/1:2,14:16:39.13:649,39,0	1/1:5,32:37:96.30:1547,96,0	1/1:1,17:18:45.15:749,45,0	1/1:4,22:26:72.25:1194,72,0	1/1:1,26:27:57.19:949,57,0	1/1:0,17:17:45.15:749,45,0	1/1:1,29:30:78.08:1297,78,0	1/1:0,19:19:51.17:849,51,0	1/1:0,23:23:69.24:1149,69,0	1/1:1,23:24:69.24:1149,69,0	1/1:0,26:26:66.23:1099,66,0	1/1:0,16:16:39.13:650,39,0	1/1:3,22:25:66.23:1097,66,0	1/1:0,20:20:57.19:949,57,0	1/1:2,32:34:78.27:1299,78,0	1/1:3,19:22:45.15:749,45,0	1/1:1,19:20:48.16:800,48,0	1/1:1,25:26:63.22:1049,63,0	1/1:0,23:23:57.19:950,57,0	1/1:0,29:29:87.29:1425,87,0	1/1:1,31:32:81.28:1348,81,0	1/1:0,15:15:39.13:650,39,0
chr10	81859173	.	GTTTGT	G	11096.34	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-7.567;DP=721;FS=0.379;HRun=0;HaplotypeScore=180.0797;InbreedingCoeff=0.9677;MQ=66.81;MQ0=3;MQRankSum=3.264;QD=28.60;ReadPosRankSum=5.257;VQSLOD=4.6517;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,7:32:5.88:566,6,0	1/1:9,4:13:18.05:299,18,0	0/0:37,0:28:18.06:0,18,370	0/0:55,0:37:16.88:0,17,327	1/1:17,11:28:33.11:601,33,0	0/0:13,0:25:54.18:0,54,1129	0/0:17,0:17:36.10:0,36,725	0/0:33,0:33:36.11:0,36,831	0/0:13,0:20:36.12:0,36,723	1/1:16,9:26:36.11:583,36,0	1/1:16,6:22:33.09:544,33,0	0/0:16,0:25:54.17:0,54,1110	0/0:23,0:29:32.99:0,33,581	0/0:16,0:20:30.57:0,31,604	1/1:13,9:22:33.08:567,33,0	1/1:10,12:22:48.16:852,48,0	1/1:18,12:30:54.14:929,54,0	1/1:13,7:20:9.08:419,9,0	1/1:10,13:21:39.11:660,39,0	1/1:11,14:26:54.13:916,54,0	1/1:7,5:12:18.06:327,18,0	0/0:14,0:20:39:0,39,706	0/0:11,0:19:33.11:0,33,695	0/0:15,0:32:74.81:0,75,1388	1/1:19,17:36:69.18:1180,69,0	1/1:13,9:22:42.14:731,42,0	1/1:14,27:41:96.32:1703,96,0	1/1:9,4:13:12.04:218,12,0
chr10	81859777	.	ATC	A	2389.88	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.501;DP=591;FS=3.143;HRun=0;HaplotypeScore=130.6950;InbreedingCoeff=0.9956;MQ=69.31;MQ0=0;MQRankSum=1.277;QD=41.20;ReadPosRankSum=-1.044;VQSLOD=4.5280;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:69.23:1054,69,0	0/0:9,0:9:27.08:0,27,311	0/0:14,0:14:38.63:0,39,606	0/0:14,0:11:26.81:0,27,425	0/0:30,0:30:90.22:0,90,1027	0/0:18,0:18:48.05:0,48,519	0/0:10,0:10:30.09:0,30,524	1/1:0,35:35:99:1458,102,0	0/0:10,0:10:30.07:0,30,326	0/0:39,0:39:99:0,117,1323	0/0:27,0:27:78.21:0,78,877	0/0:15,0:15:33.09:0,33,391	0/0:22,0:22:66.12:0,66,738	0/0:22,0:22:63.17:0,63,739	0/0:23,0:22:66.03:0,66,724	0/0:21,0:21:63.17:0,63,722	0/0:23,0:22:69.18:0,69,766	0/0:18,0:18:48.02:0,48,530	0/0:24,0:24:68.96:0,69,736	0/0:33,0:33:96.25:0,96,1073	0/0:17,0:17:48.14:0,48,550	0/0:21,0:21:60.11:0,60,662	0/0:24,0:24:66.04:0,66,693	0/0:10,0:10:21.05:0,21,227	0/0:23,0:23:69.16:0,69,760	0/0:26,0:26:75.20:0,75,835	0/0:31,0:31:81.19:0,81,897	0/0:9,0:9:26.99:0,27,262
chr10	81859779	.	C	CT	14019.02	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-10.765;DP=593;FS=2.001;HRun=8;HaplotypeScore=83.9051;InbreedingCoeff=0.9406;MQ=68.24;MQ0=0;MQRankSum=-4.013;QD=28.26;ReadPosRankSum=3.431;VQSLOD=5.1018;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:51.06:0,51,160	1/1:1,8:9:24.07:277,24,0	0/0:15,0:15:36.02:0,36,329	0/0:13,0:10:5.50:0,6,174	1/1:3,27:30:75.22:866,75,0	1/1:2,16:18:45.13:519,45,0	0/0:10,0:10:27.01:0,27,247	0/0:36,0:35:64.38:0,64,202	1/1:1,9:10:27.08:311,27,0	1/1:8,31:39:93.28:1073,93,0	1/1:2,23:25:75.20:853,75,0	1/1:2,13:15:5.63:317,6,0	1/1:5,17:22:32.74:628,33,0	1/1:5,19:24:57.13:641,57,0	1/1:3,20:22:61.42:695,61,0	1/1:3,19:22:57.17:658,57,0	1/1:1,23:23:66.20:762,66,0	1/1:4,12:16:36.11:415,36,0	1/1:1,21:22:66.16:741,66,0	1/1:1,31:32:90.23:1025,90,0	1/1:3,15:18:48.10:539,48,0	1/1:3,19:22:54.12:608,54,0	1/1:9,16:25:39.89:542,40,0	1/1:1,8:9:18.05:207,18,0	1/1:5,19:24:57.17:658,57,0	1/1:5,21:26:63.19:727,63,0	1/1:5,27:32:69.18:784,69,0	1/1:4,5:9:15.04:173,15,0
chr10	81860984	.	G	GA	93.20	PASS	AB=1.000;AC=5;AF=0.125;AN=40;BaseQRankSum=2.724;DP=349;FS=1.166;HRun=10;HaplotypeScore=91.0053;InbreedingCoeff=0.6168;MQ=48.45;MQ0=10;MQRankSum=-3.684;QD=4.24;ReadPosRankSum=-3.295;VQSLOD=0.3856;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:25.91:0,26,200	0/0:10,0:9:23.87:0,24,182	1/1:2,0:1:0.89:2,1,0	0/1:4,0:1:0:0,0,0	0/0:24,0:23:20.47:0,20,168	./.	1/1:9,5:13:20.80:181,21,0	0/0:20,0:19:34.91:0,35,270	./.	0/0:17,0:13:17.82:0,18,140	0/0:19,0:18:26.65:0,27,203	./.	./.	./.	0/0:17,0:17:16.44:0,16,169	0/0:12,0:12:17.87:0,18,147	0/0:22,0:20:5.04:0,5,192	0/0:11,0:11:0.21:0,0,86	0/0:11,0:10:8.75:0,9,72	0/0:19,1:17:11.70:0,12,94	0/0:9,0:8:14.92:0,15,116	./.	./.	./.	0/0:25,0:24:32.23:0,32,249	0/0:27,0:27:46.10:0,46,378	0/0:24,0:23:18.22:0,18,155	0/0:11,0:10:14.93:0,15,116
chr10	81861104	.	AT	A	3053.81	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=12.339;DP=447;FS=0.000;HRun=7;HaplotypeScore=77.9797;InbreedingCoeff=0.9096;MQ=59.19;MQ0=0;MQRankSum=-9.851;QD=26.10;ReadPosRankSum=0.646;VQSLOD=4.1381;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:57.11:0,57,673	0/0:10,0:10:27.09:0,27,339	0/0:5,0:5:12.04:0,12,143	0/1:3,0:3:9.03:9,0,32	0/0:18,0:18:51.16:0,51,630	1/1:1,20:21:57.13:581,57,0	0/0:13,0:13:36.03:0,36,432	0/0:20,0:20:60.18:0,60,742	1/1:4,15:19:57.07:556,57,0	0/0:17,0:17:42.12:0,42,508	0/0:22,0:22:57.18:0,57,717	1/1:1,13:14:39.09:397,39,0	1/1:1,6:7:18:172,18,0	1/1:0,9:9:27.06:275,27,0	0/0:22,0:22:60.18:0,60,736	0/0:21,0:21:63.16:0,63,754	0/0:24,0:24:57.18:0,57,717	0/0:16,0:16:30.08:0,30,364	0/0:14,0:14:39.11:0,39,469	0/0:27,0:27:81.26:0,81,1019	0/0:6,0:6:14.99:0,15,169	1/1:1,18:19:57.13:580,57,0	1/1:2,19:21:57.13:581,57,0	1/1:0,4:4:11.95:108,12,0	0/0:20,0:20:51.16:0,51,631	0/0:21,0:21:57.17:0,57,692	0/0:23,0:22:60.18:0,60,737	0/0:8,0:8:21.07:0,21,264
chr10	81861125	.	T	TA	4338.32	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.866;DP=447;FS=7.280;HRun=0;HaplotypeScore=72.0224;InbreedingCoeff=0.9895;MQ=66.05;MQ0=0;MQRankSum=-11.066;QD=32.62;ReadPosRankSum=1.610;VQSLOD=3.9768;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.16:0,60,816	0/0:7,0:7:21.06:0,21,278	0/0:11,0:11:27.08:0,27,346	0/0:7,0:7:18.04:0,18,248	0/0:18,0:18:51.17:0,51,712	1/1:1,24:25:66.21:857,66,0	0/0:15,0:15:45.13:0,45,611	0/0:26,0:26:78.23:0,78,1019	1/1:4,13:17:36.05:500,36,0	0/0:14,0:14:42.14:0,42,587	0/0:22,0:22:63.21:0,63,876	1/1:0,14:14:42.14:550,42,0	1/1:1,11:12:36.11:456,36,0	1/1:2,10:12:26.88:350,27,0	0/0:21,0:21:57.18:0,57,781	0/0:16,0:16:45.15:0,45,629	0/0:16,0:16:48.12:0,48,644	0/0:10,0:10:30.08:0,30,398	0/0:11,0:11:33.11:0,33,458	0/0:27,0:27:81.27:0,81,1126	0/0:4,0:4:12.04:0,12,168	1/1:4,20:24:60.02:740,60,0	1/1:5,17:22:51.05:699,51,0	1/1:0,7:7:15.05:186,15,0	0/0:14,0:14:39.09:0,39,523	0/0:20,0:20:60.20:0,60,839	0/0:23,0:22:66.17:0,66,884	0/0:11,0:11:27.09:0,27,377
chr10	81861433	.	AACACATACACAC	A	1912.41	PASS	AB=0.745;AC=11;AF=0.196;AN=56;BaseQRankSum=1.790;DP=577;FS=1.746;HRun=0;HaplotypeScore=190.2123;InbreedingCoeff=0.4835;MQ=76.53;MQ0=11;MQRankSum=-1.284;QD=12.58;ReadPosRankSum=1.208;VQSLOD=2.5345;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:75.10:0,75,2340	0/0:14,0:14:33.53:0,34,714	0/0:34,0:27:34.18:0,34,581	0/0:46,0:36:73.49:0,73,804	0/0:14,0:18:29.68:0,30,419	0/1:2,0:23:11.05:45,0,11	0/0:22,0:22:25.78:0,26,708	0/0:28,0:27:74.95:0,75,746	0/1:3,13:16:2.76:247,0,3	0/0:16,0:15:35.89:0,36,1007	0/0:27,0:27:41.15:0,41,520	1/1:1,17:19:12.04:401,12,0	0/1:13,0:17:99:163,0,100	0/1:17,0:17:99:111,0,156	0/0:19,0:19:27.01:0,27,358	0/0:22,0:23:25.69:0,26,860	0/0:17,0:17:23.99:0,24,478	0/0:9,0:8:23.83:0,24,459	0/0:16,0:16:42.03:0,42,777	0/0:21,0:22:45.03:0,45,609	0/0:27,0:25:35.70:0,36,810	0/1:13,0:16:99:122,0,100	1/1:21,4:24:50.79:660,51,0	1/1:15,3:18:29.50:329,30,0	0/0:19,0:19:27.02:0,27,533	0/0:20,0:20:55.77:0,56,1190	0/0:14,0:14:28.69:0,29,379	0/0:6,0:6:14.88:0,15,439
chr10	81861439	.	T	TACACAC	3115.21	PASS	AB=0.989;AC=34;AF=0.654;AN=52;BaseQRankSum=-4.633;DP=583;FS=4.603;HRun=0;HaplotypeScore=139.8985;InbreedingCoeff=0.5388;MQ=65.63;MQ0=16;MQRankSum=1.739;QD=8.01;ReadPosRankSum=0.168;VQSLOD=2.5668;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:1.55:2,0,391	1/1:14,0:14:21.06:378,21,0	./.	./.	1/1:19,0:19:3.01:95,3,0	0/0:27,0:26:2.32:0,2,40	0/0:14,0:19:11.83:0,12,122	0/1:32,0:29:0:0,0,0	0/0:14,0:14:4.40:0,4,27	1/1:8,1:15:18.06:420,18,0	1/1:25,0:26:14.66:138,15,0	0/0:20,0:19:4.21:0,4,68	0/0:17,0:17:5.88:0,6,65	1/1:16,0:16:5.08:32,5,0	1/1:10,11:25:3.01:87,3,0	1/1:24,0:23:21.04:335,21,0	1/1:8,0:14:5.14:66,5,0	1/1:9,1:8:10.06:161,10,0	1/1:13,8:20:23.96:353,24,0	1/1:11,11:22:15.05:279,15,0	1/1:24,0:22:17.29:274,17,0	0/0:17,0:17:6.42:0,6,79	0/1:26,0:24:1.13:1,0,25	0/1:20,0:20:1.11:1,0,6	1/1:18,0:18:3.01:96,3,0	1/1:23,0:23:34.53:355,35,0	0/0:13,0:13:0.47:0,0,1	1/1:4,2:6:7.58:196,8,0
chr10	81861481	.	C	CACACAC	3401.53	PASS	AB=1.000;AC=36;AF=0.692;AN=52;BaseQRankSum=-4.152;DP=633;FS=1.906;HRun=0;HaplotypeScore=145.7881;InbreedingCoeff=0.4921;MQ=52.95;MQ0=26;MQRankSum=1.059;QD=7.43;ReadPosRankSum=-0.504;VQSLOD=2.4154;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:28:1.55:2,0,391	1/1:8,0:8:21.54:378,22,0	./.	./.	1/1:21,0:21:3.01:96,3,0	0/0:35,0:34:2.85:0,3,41	0/0:17,0:16:11.83:0,12,122	1/1:46,0:40:2.70:8,3,0	0/0:14,0:14:4.40:0,4,27	1/1:25,0:23:18.06:410,18,0	1/1:18,7:30:11.54:121,12,0	0/0:21,0:21:4.21:0,4,68	0/0:20,0:20:5.99:0,6,65	1/1:15,0:15:5.46:33,5,0	1/1:24,0:24:3.01:87,3,0	1/1:22,0:21:21.04:335,21,0	1/1:25,0:24:8.15:162,8,0	1/1:13,0:10:10.06:161,10,0	1/1:25,0:22:20.99:358,21,0	1/1:21,0:21:17.97:296,18,0	1/1:31,0:26:16.86:274,17,0	0/0:18,0:18:5.95:0,6,78	0/1:14,0:13:1.13:1,0,25	0/1:28,0:27:0.84:1,0,6	1/1:14,4:20:5.75:108,6,0	1/1:22,0:28:34.53:355,35,0	1/1:21,0:19:2.03:35,2,0	0/1:9,0:9:6.88:183,0,7
chr10	81863472	.	A	AT	7019.01	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-8.295;DP=592;FS=2.414;HRun=1;HaplotypeScore=56.0210;InbreedingCoeff=0.9930;MQ=81.04;MQ0=0;MQRankSum=-3.073;QD=41.05;ReadPosRankSum=2.340;VQSLOD=5.4484;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1579	0/0:9,0:9:27.09:0,27,351	0/0:24,0:24:69.22:0,69,883	0/0:18,0:18:45.15:0,45,583	0/0:17,0:17:51.17:0,51,662	1/1:0,22:22:60.20:899,60,0	0/0:22,0:22:66.21:0,66,856	0/0:31,0:31:84.26:0,84,1066	1/1:2,24:26:72.24:1078,72,0	0/0:15,0:15:45.14:0,45,562	0/0:11,0:11:30.08:0,30,375	1/1:0,28:28:81.27:1214,81,0	1/1:1,26:27:78.26:1155,78,0	1/1:0,20:20:48.14:696,48,0	0/0:28,0:28:84.26:0,84,1078	0/0:30,0:30:87.28:0,87,1129	0/0:34,0:34:93.30:0,93,1206	0/0:19,0:19:51.13:0,51,631	0/0:21,0:20:57.18:0,57,738	0/0:10,0:10:30.10:0,30,389	0/0:33,0:33:99:0,99,1254	1/1:0,11:11:27.09:404,27,0	1/1:0,6:6:18.06:270,18,0	1/1:0,31:31:87.29:1304,87,0	0/0:20,0:20:60.15:0,60,748	0/0:15,0:14:42.14:0,42,545	0/0:18,0:18:51.17:0,51,662	0/0:4,0:4:12.04:0,12,155
chr10	81863641	.	T	TTGTG	4429.54	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=-5.667;DP=620;FS=5.688;HRun=0;HaplotypeScore=184.3951;InbreedingCoeff=0.1764;MQ=52.31;MQ0=5;MQRankSum=2.785;QD=9.00;ReadPosRankSum=-2.794;VQSLOD=2.8797;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,22:33:27.17:562,27,0	0/0:8,0:8:9:0,9,77	0/0:31,0:19:43.82:0,44,623	0/0:24,0:18:42.03:0,42,609	0/1:18,0:18:69.86:70,0,82	1/1:6,13:19:9.02:172,9,0	0/0:28,0:28:44.49:0,44,533	1/1:17,0:34:17:275,17,0	1/1:5,17:25:18.06:433,18,0	0/1:22,0:22:92.43:92,0,97	0/1:15,0:15:16.38:41,0,16	1/1:5,20:27:26.03:527,26,0	1/1:7,21:29:22.59:582,23,0	1/1:2,33:37:36.05:822,36,0	0/0:22,0:22:32.97:0,33,283	0/1:17,0:17:12.88:13,0,154	0/1:28,0:28:41.59:42,0,128	0/0:12,0:12:4.24:0,4,49	0/1:14,0:11:19.44:20,0,19	0/1:23,0:23:26.98:27,0,113	1/1:20,0:20:2.99:24,3,0	1/1:6,14:22:11.64:199,12,0	1/1:3,10:13:6:61,6,0	1/1:5,28:34:18.01:341,18,0	0/1:18,0:17:50.91:51,0,107	0/1:24,0:23:63.35:63,0,155	0/1:19,0:20:10.45:10,0,201	0/0:3,0:3:3:0,3,26
chr10	81863643	.	GTA	G	4966.22	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=1.107;DP=607;FS=3.972;HRun=0;HaplotypeScore=163.5580;InbreedingCoeff=0.4797;MQ=51.47;MQ0=5;MQRankSum=-2.689;QD=9.93;ReadPosRankSum=-3.097;VQSLOD=4.2829;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:6.26:76,0,6	1/1:4,4:8:9:81,9,0	0/0:32,0:20:40.70:0,41,509	0/0:24,0:16:31.01:0,31,466	1/1:10,8:18:29.94:256,30,0	0/1:19,0:19:2.43:41,0,2	0/0:28,0:28:42.84:0,43,430	1/1:30,0:30:27.30:390,27,0	0/0:23,0:23:13.35:0,13,46	1/1:17,5:22:50.89:437,51,0	1/1:8,5:13:13.73:125,14,0	0/1:25,0:25:2.28:71,0,2	0/1:29,0:29:4.84:120,0,5	0/1:37,0:37:13.65:14,0,44	1/1:0,22:22:36.02:336,36,0	1/1:0,16:16:35.77:327,36,0	1/1:20,7:27:58.62:456,59,0	1/1:11,2:13:20.92:174,21,0	1/1:14,1:12:19.43:168,19,0	1/1:15,8:23:30.13:263,30,0	1/1:17,2:19:8.42:65,8,0	1/1:21,0:21:7.64:90,8,0	1/1:12,1:13:11.96:99,12,0	0/1:34,0:34:7.76:15,0,8	1/1:11,7:18:38.86:344,39,0	1/1:14,9:22:59.65:522,60,0	1/1:12,8:20:46.83:420,47,0	1/1:2,1:3:8.99:77,9,0
chr10	81863645	.	A	ATG	2273.62	PASS	AB=0.959;AC=29;AF=0.518;AN=56;BaseQRankSum=-7.518;DP=615;FS=14.880;HRun=0;HaplotypeScore=180.4971;InbreedingCoeff=0.3524;MQ=50.82;MQ0=5;MQRankSum=5.830;QD=5.04;ReadPosRankSum=-1.989;VQSLOD=2.0905;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:27.02:279,27,0	0/0:8,0:8:8.44:0,8,41	0/0:31,0:19:20.99:0,21,221	0/0:24,0:16:9.13:0,9,122	0/1:18,0:18:2.50:2,0,45	1/1:18,0:18:9.47:79,9,0	0/1:12,17:29:50.35:214,0,50	1/1:29,0:29:31.01:493,31,0	1/1:22,0:22:17.96:154,18,0	0/1:23,0:23:43.17:43,0,44	0/0:13,0:13:2.64:0,3,13	1/1:25,0:25:20.98:200,21,0	1/1:29,0:29:27.45:238,27,0	1/1:34,0:34:35.80:305,36,0	0/0:22,0:22:11.94:0,12,124	0/1:17,0:17:14.71:15,0,85	0/1:27,0:27:2.57:3,0,59	0/0:14,0:14:8.34:0,8,40	0/1:17,0:14:6.84:15,0,7	0/0:22,0:22:13.62:0,14,67	0/1:20,0:20:0.01:0,0,0	1/1:22,0:22:12.02:148,12,0	1/1:13,0:13:3.01:46,3,0	1/1:36,0:36:18.02:196,18,0	0/1:19,0:18:4.28:4,0,50	0/0:27,0:26:4.99:0,5,84	0/1:21,0:21:22.51:23,0,87	0/0:3,0:3:2.80:0,3,13
chr10	81863655	.	GTGTGTGTGTA	G	8257.42	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=2.415;DP=597;FS=8.809;HRun=0;HaplotypeScore=212.6908;InbreedingCoeff=0.9175;MQ=48.15;MQ0=6;MQRankSum=-4.647;QD=31.40;ReadPosRankSum=1.677;VQSLOD=3.5857;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:37.92:0,38,1401	1/1:8,0:8:12:291,12,0	0/0:25,0:14:27.07:0,27,758	0/0:21,0:13:23.29:0,23,592	1/1:16,0:16:18.53:511,19,0	0/0:19,0:19:27.08:0,27,655	0/0:29,0:29:30.56:0,31,935	0/0:24,0:24:35.08:0,35,1470	0/0:22,0:22:24.54:0,25,790	1/1:23,0:23:41.57:771,42,0	1/1:12,0:12:4.06:95,4,0	0/0:26,0:26:33.06:0,33,996	0/0:28,0:28:36.99:0,37,1211	0/0:35,0:35:44.77:0,45,1601	1/1:22,0:22:39.13:1100,39,0	1/1:16,1:17:38.91:1041,39,0	1/1:24,0:24:29.70:753,30,0	1/1:15,0:15:17.03:279,17,0	1/1:17,0:14:6.04:176,6,0	1/1:20,1:21:22.79:515,23,0	1/1:21,0:21:4.75:32,5,0	0/0:21,0:21:21.07:0,21,702	0/0:15,0:15:12.03:0,12,221	0/0:37,0:37:36.12:0,36,1179	1/1:15,0:14:29.82:595,30,0	1/1:25,1:25:50.97:1050,51,0	1/1:21,1:22:10.31:931,10,0	1/1:4,0:4:7.36:119,7,0
chr10	81863657	.	GTGTGTGTA	G	5764.55	PASS	AB=0.947;AC=29;AF=0.518;AN=56;BaseQRankSum=6.930;DP=595;FS=4.048;HRun=0;HaplotypeScore=206.7136;InbreedingCoeff=0.8738;MQ=48.20;MQ0=5;MQRankSum=-5.782;QD=22.00;ReadPosRankSum=2.102;VQSLOD=4.4167;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:37.74:0,38,1143	1/1:4,4:8:9.50:190,10,0	0/0:23,0:12:23.22:0,23,644	0/0:19,0:12:23.28:0,23,466	1/1:9,8:17:21.05:379,21,0	0/0:19,0:19:27.08:0,27,557	0/0:30,0:30:12.09:0,12,762	0/0:26,0:26:6.13:0,6,1196	0/0:23,0:23:30.06:0,30,684	1/1:17,5:22:36.39:537,36,0	1/1:6,5:11:5.96:90,6,0	0/0:25,0:25:33.30:0,33,799	0/0:29,0:29:38.98:0,39,974	0/0:35,0:35:31.24:0,31,1317	1/1:9,13:22:38.16:751,38,0	1/1:7,10:17:37.52:738,38,0	1/1:18,6:24:32.68:526,33,0	1/1:13,2:15:14.45:180,14,0	0/1:17,1:15:0.77:140,0,1	1/1:13,7:20:23.21:382,23,0	1/1:19,1:20:1.33:6,1,0	0/0:21,0:21:21.06:0,21,557	0/0:15,0:15:10.57:0,11,152	0/0:36,0:36:36.12:0,36,976	1/1:8,7:15:24.94:382,25,0	1/1:19,8:26:45.89:724,46,0	1/1:15,7:22:17.83:641,18,0	1/1:3,1:4:8.70:97,9,0
chr10	81863663	.	GTA	G	3156.68	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=7.048;DP=541;FS=3.666;HRun=0;HaplotypeScore=158.2648;InbreedingCoeff=0.8958;MQ=50.56;MQ0=4;MQRankSum=-6.335;QD=13.78;ReadPosRankSum=2.816;VQSLOD=3.5086;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:48.28:0,48,449	1/1:5,0:5:11.87:88,12,0	0/0:24,0:14:21.44:0,21,381	0/0:19,0:12:24.70:0,25,231	1/1:12,0:12:23.89:189,24,0	0/0:18,0:18:23.98:0,24,252	0/0:29,0:29:18.03:0,18,362	0/0:25,0:25:10.23:0,10,452	0/0:23,0:23:37.13:0,37,315	1/1:18,1:19:43.97:363,44,0	1/1:13,0:13:13.69:115,14,0	0/0:25,0:25:33.37:0,33,313	0/0:26,0:26:44.83:0,45,396	0/0:36,0:36:40.13:0,40,489	1/1:19,0:19:38.97:331,39,0	1/1:17,0:17:39.53:322,40,0	1/1:20,0:20:34.70:260,35,0	1/1:11,0:11:16.61:131,17,0	1/1:14,0:11:28.70:184,29,0	1/1:11,2:13:21.12:179,21,0	1/1:5,12:17:4.55:29,5,0	0/0:22,0:22:30.02:0,30,299	0/1:11,0:11:9.52:10,0,43	0/0:33,0:33:42.02:0,42,430	1/1:13,0:12:32.67:256,33,0	1/1:21,1:21:58.80:470,59,0	1/1:11,7:18:41.77:337,42,0	1/1:5,0:5:14.95:117,15,0
chr10	81863986	.	C	CA	5594.73	PASS	AB=0.588;AC=15;AF=0.268;AN=56;BaseQRankSum=-14.136;DP=635;FS=4.610;HRun=7;HaplotypeScore=58.3535;InbreedingCoeff=0.9137;MQ=81.71;MQ0=0;MQRankSum=-2.606;QD=30.74;ReadPosRankSum=2.077;VQSLOD=5.2727;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:27.04:0,27,261	0/0:9,0:9:27.04:0,27,260	0/0:27,0:27:44.48:0,44,556	0/0:8,0:8:15.02:0,15,144	0/0:35,0:35:93.07:0,93,879	1/1:2,31:33:87.27:1051,87,0	0/0:20,0:20:48.07:0,48,464	0/0:27,0:27:75.12:0,75,724	1/1:3,25:28:75.23:905,75,0	0/0:31,0:31:87.13:0,87,836	0/0:20,0:20:42.05:0,42,404	1/1:3,12:15:36.11:435,36,0	1/1:3,25:28:72.21:870,72,0	1/1:3,26:29:72.22:870,72,0	0/0:34,0:34:96.12:0,96,918	0/0:26,1:27:35.88:0,36,630	0/0:31,0:31:90.12:0,90,861	0/0:31,0:31:78.07:0,78,744	0/0:12,0:12:30.05:0,30,290	0/0:35,0:35:99:0,99,956	0/0:12,0:12:33.05:0,33,319	1/1:2,19:21:57.17:688,57,0	0/1:3,7:10:7.91:196,0,8	1/1:1,17:18:48.15:580,48,0	0/0:19,0:18:45.06:0,45,434	0/0:33,0:33:81.12:0,81,782	0/0:27,0:27:72.10:0,72,690	0/0:4,0:4:12.02:0,12,116
chr10	81864832	.	T	TAA	8566.07	PASS	AB=0.605;AC=37;AF=0.661;AN=56;BaseQRankSum=-12.085;DP=590;FS=9.752;HRun=11;HaplotypeScore=104.3425;InbreedingCoeff=0.9035;MQ=76.23;MQ0=0;MQRankSum=0.517;QD=20.25;ReadPosRankSum=-2.207;VQSLOD=2.8659;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:54.05:0,54,522	1/1:2,9:12:21.44:271,21,0	0/0:12,0:13:11.89:0,12,114	0/0:17,0:16:8.31:0,8,102	1/1:3,25:30:77.49:932,77,0	0/0:2,0:19:46.65:0,47,203	0/0:13,0:14:23.91:0,24,267	1/1:9,1:28:54.64:272,55,0	0/0:2,0:21:52.07:0,52,227	1/1:6,21:29:59.53:663,60,0	1/1:4,9:16:29.99:357,30,0	0/0:1,0:21:43.72:0,44,189	0/1:8,0:23:6.55:87,0,7	1/1:3,1:18:23.46:132,23,0	1/1:4,10:15:15.05:217,15,0	1/1:1,8:9:21.07:304,21,0	1/1:10,19:30:42.14:593,42,0	1/1:0,17:18:32.56:420,33,0	1/1:16,11:27:57.58:717,58,0	1/1:7,26:37:60.88:993,61,0	1/1:1,11:12:15.05:217,15,0	1/1:6,0:24:35.41:131,35,0	0/0:2,0:26:57.37:0,57,248	0/0:1,0:13:30.18:0,30,131	1/1:8,26:35:57.24:775,57,0	1/1:4,17:21:54.02:650,54,0	1/1:7,21:32:53.83:703,54,0	1/1:0,7:7:9.03:130,9,0
chr10	81864982	.	C	CTG	5566.38	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=17.661;DP=582;FS=2.541;HRun=0;HaplotypeScore=102.6622;InbreedingCoeff=0.9993;MQ=81.57;MQ0=0;MQRankSum=-17.076;QD=37.36;ReadPosRankSum=2.181;VQSLOD=7.1201;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.23:0,66,1077	0/0:9,0:9:27.09:0,27,441	0/0:14,0:14:42.14:0,42,683	0/0:22,0:22:54.62:0,55,833	0/0:30,0:30:90.31:0,90,1465	1/1:1,11:12:36.11:475,36,0	0/0:11,0:11:33.11:0,33,539	0/0:41,0:41:99:0,123,2000	1/1:2,17:19:54.07:708,54,0	0/0:32,0:32:96.31:0,96,1543	0/0:24,0:24:72.22:0,72,1125	1/1:0,23:23:69.22:905,69,0	1/1:3,20:23:63.05:851,63,0	1/1:1,21:23:69.23:927,69,0	0/0:26,0:26:78.27:0,78,1273	0/0:22,0:22:66.23:0,66,1075	0/0:14,0:14:42.14:0,42,685	0/0:9,0:9:27.09:0,27,440	0/0:19,0:19:54.18:0,54,881	0/0:24,0:24:72.25:0,72,1173	0/0:25,0:25:75.24:0,75,1199	1/1:1,20:22:60.12:811,60,0	1/1:2,10:12:30.10:403,30,0	1/1:1,14:15:38.61:488,39,0	0/0:23,0:23:66.21:0,66,1049	0/0:31,0:31:93.31:0,93,1492	0/0:26,0:26:75.24:0,75,1199	0/0:9,0:9:27.09:0,27,440
chr10	81864983	.	A	AAAT	8358.29	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=18.016;DP=603;FS=1.917;HRun=0;HaplotypeScore=113.3042;InbreedingCoeff=0.9994;MQ=80.32;MQ0=0;MQRankSum=-17.999;QD=49.46;ReadPosRankSum=0.164;VQSLOD=6.9536;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.23:0,66,1228	0/0:9,0:9:27.09:0,27,503	0/0:14,0:14:42.13:0,42,746	0/0:22,0:22:62.28:0,62,1003	0/0:30,0:30:90.31:0,90,1661	1/1:6,11:17:51.17:882,51,0	0/0:12,0:12:33.11:0,33,615	0/0:41,0:41:99:0,123,2256	1/1:2,17:19:47.77:907,48,0	0/0:32,0:32:96.33:0,96,1785	0/0:23,0:23:69.23:0,69,1250	1/1:2,23:25:75.26:1297,75,0	1/1:4,20:24:71.59:1202,72,0	1/1:3,21:24:72.25:1263,72,0	0/0:26,0:26:78.27:0,78,1454	0/0:22,0:22:66.23:0,66,1229	0/0:14,0:14:42.14:0,42,783	0/0:9,0:9:27.09:0,27,502	0/0:19,0:19:57.18:0,57,1033	0/0:24,0:24:72.25:0,72,1342	0/0:25,0:25:75.26:0,75,1376	1/1:7,20:27:78.26:1335,78,0	1/1:3,10:13:33.11:584,33,0	1/1:6,14:20:53.85:889,54,0	0/0:24,0:24:69.21:0,69,1217	0/0:31,0:31:90.29:0,90,1609	0/0:26,0:26:78.25:0,78,1414	0/0:9,0:9:27.09:0,27,503
chr10	81866338	.	CT	C	5340.03	PASS	AB=0.875;AC=35;AF=0.625;AN=56;BaseQRankSum=-7.268;DP=533;FS=3.678;HRun=12;HaplotypeScore=65.9926;InbreedingCoeff=0.8719;MQ=65.57;MQ0=0;MQRankSum=-0.994;QD=15.52;ReadPosRankSum=3.105;VQSLOD=5.9782;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:59.77:464,60,0	1/1:0,6:6:17.93:139,18,0	0/1:6,1:6:5.29:5,0,114	0/0:11,0:7:0.78:0,1,42	1/1:6,21:27:56.70:440,57,0	0/0:5,0:22:42.61:0,43,214	1/1:1,0:10:18.33:53,18,0	0/0:28,2:29:24.87:0,25,557	0/0:5,0:22:17.93:0,18,133	1/1:9,32:41:65.12:689,65,0	1/1:6,16:22:38.80:302,39,0	0/0:5,0:18:31.78:0,32,205	0/0:6,0:21:26.09:0,26,159	0/0:8,0:24:23.20:0,23,129	1/1:5,13:18:3.13:200,3,0	1/1:6,7:14:18.77:127,19,0	1/1:2,10:12:29.89:232,30,0	1/1:5,14:19:35.83:278,36,0	1/1:9,4:13:14.88:116,15,0	1/1:7,30:37:56.19:619,56,0	1/1:2,11:14:28.92:215,29,0	0/0:4,0:10:21.29:0,21,114	0/0:3,0:17:36.59:0,37,185	0/0:1,0:13:19.89:0,20,100	1/1:2,19:21:56.77:441,57,0	1/1:6,18:24:50.76:394,51,0	1/1:5,22:27:40.30:462,40,0	1/1:0,8:8:20.92:163,21,0
chr10	81866913	.	TACAC	T	9525.27	PASS	AB=0.778;AC=29;AF=0.518;AN=56;BaseQRankSum=8.360;DP=883;FS=3.406;HRun=0;HaplotypeScore=257.7240;InbreedingCoeff=0.8969;MQ=55.23;MQ0=5;MQRankSum=-16.470;QD=22.47;ReadPosRankSum=3.709;VQSLOD=4.1230;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,1:37:89.99:0,90,1942	1/1:2,4:7:12.03:179,12,0	0/0:41,0:28:40.82:0,41,739	0/0:27,0:13:18.05:0,18,350	1/1:6,26:31:38.99:653,39,0	0/0:9,0:29:44.55:0,45,638	0/0:3,0:20:44.07:0,44,211	0/0:47,0:45:93.21:0,93,1942	0/0:16,0:37:51.24:0,51,1144	1/1:8,38:44:81.87:1606,82,0	1/1:6,15:21:24.08:402,24,0	0/0:9,0:25:38.92:0,39,646	0/0:41,0:41:96.33:0,96,2332	0/0:36,0:36:96.77:0,97,2180	1/1:16,35:47:59.85:945,60,0	1/1:10,44:40:66.09:1059,66,0	1/1:12,12:24:32.02:564,32,0	1/1:4,8:9:15.03:252,15,0	1/1:5,14:15:36.10:562,36,0	1/1:3,27:31:38.62:758,39,0	0/1:30,12:30:27.65:68,0,28	0/0:33,0:34:77.97:0,78,1654	0/0:14,0:33:38.55:0,39,625	0/0:11,0:49:72.09:0,72,1068	1/1:8,18:26:42.14:692,42,0	1/1:7,28:34:66.14:1232,66,0	1/1:7,11:17:30.10:503,30,0	1/1:1,1:2:3.01:50,3,0
chr10	81867206	.	GCA	G	3559.62	PASS	AB=0.971;AC=7;AF=0.125;AN=56;BaseQRankSum=12.972;DP=1044;FS=18.344;HRun=0;HaplotypeScore=167.3860;InbreedingCoeff=0.8908;MQ=56.82;MQ0=3;MQRankSum=4.536;QD=22.82;ReadPosRankSum=2.511;VQSLOD=3.2296;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:99:0,108,1723	0/0:6,0:6:18.06:0,18,301	0/0:30,0:20:30.08:0,30,462	0/1:33,1:19:2.09:2,0,441	0/0:31,0:31:75.26:0,75,1244	0/0:17,0:18:51.17:0,51,828	0/0:38,0:38:93.13:0,93,1527	0/0:42,2:42:25.90:0,26,1435	0/0:35,0:33:73.78:0,74,1270	0/0:56,0:56:99:0,144,2359	0/0:26,0:26:55.39:0,55,1156	0/0:48,0:48:99:0,108,1801	1/1:8,34:41:90.29:1146,90,0	1/1:5,42:47:99:1496,123,0	0/0:65,0:65:99:0,166,2720	0/0:57,0:57:99:0,150,2478	0/0:38,0:35:84.25:0,84,1403	0/0:18,0:17:48.16:0,48,782	0/0:25,0:25:63.20:0,63,1006	0/0:40,0:40:99:0,105,1707	0/0:74,0:73:99:0,181,2956	1/1:3,30:33:71.82:916,72,0	0/0:23,0:23:63.21:0,63,1019	0/0:47,0:46:99:0,120,2005	0/0:37,0:37:99:0,105,1752	0/0:39,1:40:67.15:0,67,1669	0/0:36,0:36:93.32:0,93,1544	0/0:10,0:10:27.09:0,27,452
chr10	81867314	.	AT	A	5187.03	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.823;DP=661;FS=1.906;HRun=7;HaplotypeScore=67.7243;InbreedingCoeff=0.9969;MQ=69.62;MQ0=0;MQRankSum=-0.781;QD=25.43;ReadPosRankSum=2.975;VQSLOD=5.6302;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:57.18:0,57,717	0/0:11,0:11:33.08:0,33,391	0/0:13,0:13:26.70:0,27,273	0/0:5,0:5:15.05:0,15,189	0/0:42,0:42:99:0,111,1396	1/1:1,15:16:42.09:428,42,0	0/0:21,0:21:54.16:0,54,665	0/0:37,0:37:90.28:0,90,1122	1/1:1,28:29:81.18:826,81,0	0/0:27,0:27:78.23:0,78,951	0/0:22,0:22:57.17:0,57,705	1/1:3,30:33:75.17:764,75,0	1/1:1,30:31:78.17:796,78,0	1/1:1,19:20:57.12:581,57,0	0/0:25,0:25:63.20:0,63,792	0/0:30,0:30:87.27:0,87,1081	0/0:22,0:22:54.15:0,54,663	0/0:18,0:18:48.15:0,48,604	0/0:31,0:31:84.26:0,84,1045	0/0:29,0:29:78.24:0,78,966	0/0:13,0:13:39.12:0,39,490	1/1:0,22:22:60.10:601,60,0	1/1:4,22:26:60.13:611,60,0	1/1:5,22:27:57.13:581,57,0	0/0:22,0:22:57.18:0,57,717	0/0:29,0:29:81.24:0,81,1004	0/0:27,0:27:75.20:0,75,915	0/0:10,0:10:27.09:0,27,340
chr10	81867444	.	A	AT	4927.17	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-12.773;DP=586;FS=2.630;HRun=7;HaplotypeScore=54.3428;InbreedingCoeff=0.9692;MQ=70.62;MQ0=0;MQRankSum=1.330;QD=31.38;ReadPosRankSum=1.901;VQSLOD=5.0407;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.10:0,63,608	0/0:9,0:9:24.03:0,24,226	0/0:9,1:10:17.99:0,18,157	0/0:6,0:6:3:0,3,29	0/0:40,0:40:99:0,111,1060	1/1:1,17:18:45.14:544,45,0	0/0:18,0:18:51.08:0,51,493	0/0:34,0:34:78.10:0,78,749	1/1:1,22:23:66.20:797,66,0	0/0:19,0:19:39.05:0,39,377	0/0:23,0:23:57.09:0,57,550	1/1:0,15:15:42.13:507,42,0	1/1:1,18:19:54.17:651,54,0	1/1:1,17:18:36.07:435,36,0	0/0:19,0:18:48.07:0,48,463	0/0:16,0:16:42.06:0,42,406	0/0:31,0:31:90.14:0,90,869	0/0:17,0:17:45.07:0,45,434	0/0:28,0:28:72.10:0,72,690	0/0:32,0:32:90.14:0,90,869	0/0:11,0:11:30.02:0,30,283	1/1:4,28:32:84.26:1015,84,0	1/1:2,20:22:54.17:653,54,0	1/1:0,10:10:27.08:326,27,0	0/0:25,0:25:69.11:0,69,666	0/0:28,0:28:69.10:0,69,666	0/0:22,0:22:66.11:0,66,637	0/0:19,0:19:51.08:0,51,492
chr10	81868775	.	TGTG	T	5203.24	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.673;DP=588;FS=16.961;HRun=0;HaplotypeScore=99.1404;InbreedingCoeff=0.9952;MQ=73.10;MQ0=0;MQRankSum=-6.237;QD=31.16;ReadPosRankSum=2.237;VQSLOD=4.3854;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:51.15:0,51,996	0/0:7,0:7:15.05:0,15,316	0/0:13,0:13:30:0,30,574	0/0:9,0:9:24.08:0,24,504	0/0:22,0:22:45.14:0,45,900	1/1:9,19:28:54.14:787,54,0	0/0:12,0:12:33.11:0,33,674	0/0:31,0:31:49.24:0,49,1326	1/1:3,12:15:36.04:492,36,0	0/0:35,0:35:81.27:0,81,1638	0/0:16,0:16:33.11:0,33,694	1/1:2,19:21:51.09:709,51,0	1/1:4,26:30:78.26:1173,78,0	1/1:5,15:20:42.14:631,42,0	0/0:29,0:29:84.29:0,84,1735	0/0:24,1:25:27.07:0,27,1408	0/0:15,0:15:33.11:0,33,679	0/0:11,0:11:24.08:0,24,505	0/0:26,0:26:60.19:0,60,1181	0/0:21,0:21:51.17:0,51,1074	0/0:21,0:21:48.15:0,48,952	1/1:5,12:17:36.04:492,36,0	1/1:8,7:15:20.98:287,21,0	1/1:5,16:20:42.14:632,42,0	0/0:32,0:32:75.26:0,75,1571	0/0:26,0:26:72.22:0,72,1400	0/0:31,0:31:90.31:0,90,1890	0/0:8,0:8:24.08:0,24,505
chr10	81869061	.	C	CT	2378.09	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.909;DP=682;FS=2.397;HRun=1;HaplotypeScore=63.1423;InbreedingCoeff=0.9857;MQ=62.74;MQ0=3;MQRankSum=-1.106;QD=36.03;ReadPosRankSum=1.825;VQSLOD=4.0580;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.30:0,93,1206	0/0:9,0:9:27.09:0,27,350	0/0:34,0:28:78.06:0,78,948	0/0:23,0:22:57.17:0,57,703	0/0:19,0:19:51.17:0,51,661	0/0:22,0:21:66.21:0,66,854	0/0:20,0:20:60.20:0,60,779	0/0:29,0:29:84.25:0,84,1056	0/0:26,0:26:78.25:0,78,1012	0/0:22,0:22:57.18:0,57,728	0/0:21,0:21:63.20:0,63,818	0/0:25,0:25:69.22:0,69,894	1/1:0,30:30:84.28:1259,84,0	1/1:0,26:26:72.24:1079,72,0	0/0:37,0:37:99:0,111,1439	0/0:27,0:27:78.25:0,78,1012	0/0:22,0:22:63.20:0,63,810	0/0:21,0:21:60.19:0,60,779	0/0:21,0:21:60.19:0,60,771	0/0:29,0:29:84.26:0,84,1076	0/0:41,0:40:99:0,120,1527	1/1:1,9:10:12.04:180,12,0	0/0:18,0:18:54.18:0,54,701	0/0:36,0:36:99:0,108,1387	0/0:25,0:25:75.24:0,75,974	0/0:26,0:26:69.22:0,69,884	0/0:25,0:25:69.19:0,69,865	0/0:6,0:6:18.06:0,18,234
chr10	81869294	.	G	GT	10824.60	PASS	AB=0.556;AC=45;AF=0.804;AN=56;BaseQRankSum=-3.168;DP=620;FS=8.672;HRun=8;HaplotypeScore=101.9709;InbreedingCoeff=0.8814;MQ=73.34;MQ0=1;MQRankSum=-5.384;QD=22.36;ReadPosRankSum=6.252;VQSLOD=4.1471;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.02:0,87,790	1/1:0,10:10:27.08:312,27,0	0/0:27,0:24:32.88:0,33,275	0/0:16,0:14:11.41:0,11,91	1/1:2,25:27:72.21:828,72,0	1/1:2,0:21:53.97:274,54,0	0/0:21,0:21:48.45:0,48,426	0/0:38,0:38:86.98:0,87,796	1/1:15,1:29:71.54:407,72,0	1/1:2,21:23:60.18:692,60,0	1/1:2,18:20:57.17:657,57,0	1/1:3,1:21:59.59:322,60,0	1/1:9,0:30:68.56:354,69,0	1/1:6,0:13:23.10:114,23,0	1/1:2,31:33:78.23:900,78,0	1/1:3,21:24:57.17:658,57,0	1/1:4,13:18:4.87:348,5,0	1/1:4,8:12:17.28:206,17,0	0/1:4,15:20:3.69:448,0,4	1/1:4,19:23:51.14:574,51,0	1/1:1,15:17:41.96:464,42,0	1/1:9,0:23:45.46:251,45,0	1/1:5,0:23:65.71:358,66,0	1/1:4,0:14:26.04:130,26,0	1/1:1,17:18:45.13:519,45,0	1/1:3,22:25:66.20:762,66,0	1/1:1,24:25:66.20:762,66,0	1/1:0,14:14:42.12:485,42,0
chr10	81869318	.	GTT	G	4246.04	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=8.104;DP=656;FS=4.357;HRun=11;HaplotypeScore=130.1159;InbreedingCoeff=0.9433;MQ=63.19;MQ0=2;MQRankSum=-9.223;QD=24.26;ReadPosRankSum=3.104;VQSLOD=4.0067;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:68.71:0,69,1004	0/0:12,0:13:35.61:0,36,506	0/0:28,0:17:0.14:0,0,282	0/0:14,0:6:8.02:0,8,126	0/0:30,0:31:78.26:0,78,1172	1/1:0,16:16:48.08:498,48,0	0/0:18,0:20:56.16:0,56,802	0/0:9,0:49:78.49:0,78,325	1/1:4,29:33:81.19:861,81,0	0/0:32,0:32:87.26:0,87,1259	0/0:22,0:24:65.70:0,66,954	1/1:4,21:25:63.15:670,63,0	1/1:12,14:26:32.96:351,33,0	1/1:3,9:12:15.02:160,15,0	0/0:25,0:27:74.57:0,75,1020	0/0:25,0:25:55.98:0,56,795	0/0:16,0:16:39.09:0,39,567	0/0:12,0:12:33.04:0,33,439	0/0:20,0:20:41.88:0,42,603	0/0:25,0:28:76.72:0,77,1082	0/0:20,0:20:45.11:0,45,666	1/1:1,20:20:51.12:542,51,0	1/1:2,28:30:81.11:845,81,0	1/1:2,10:12:30.07:319,30,0	0/0:24,0:24:57.18:0,57,853	0/0:28,0:28:75.24:0,75,1113	0/0:25,0:28:64.64:0,65,876	0/0:11,0:11:30.10:0,30,459
chr10	81869770	.	CTT	C	5270.93	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=7.945;DP=620;FS=5.260;HRun=10;HaplotypeScore=84.7020;InbreedingCoeff=0.9720;MQ=73.90;MQ0=1;MQRankSum=0.332;QD=27.74;ReadPosRankSum=5.876;VQSLOD=5.0120;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:18:50.65:0,51,751	0/0:9,0:10:26.58:0,27,390	0/0:24,0:20:45.09:0,45,572	0/0:13,0:13:4.76:0,5,310	0/0:27,0:29:74.21:0,74,1080	1/1:1,28:29:78.21:870,78,0	0/0:3,0:14:24.95:0,25,86	0/0:5,0:40:86.58:0,87,298	1/1:1,15:16:36.05:388,36,0	0/0:22,0:22:60.20:0,60,952	0/0:16,0:17:44.64:0,45,675	1/1:4,25:29:75.20:836,75,0	1/1:2,23:25:60.16:669,60,0	1/1:2,17:19:48.13:535,48,0	0/0:32,0:33:92.79:0,93,1414	0/0:23,0:24:65.71:0,66,1008	0/0:24,0:24:63.18:0,63,957	0/0:4,0:5:12.04:0,12,171	0/0:22,0:25:68.19:0,68,977	0/0:31,0:32:83.77:0,84,1290	0/0:14,0:14:33.11:0,33,524	1/1:4,25:29:72.19:803,72,0	1/1:3,18:21:48.12:535,48,0	1/1:2,20:22:57.15:635,57,0	0/0:26,0:26:72.25:0,72,1143	0/0:24,0:24:63.21:0,63,1000	0/0:28,0:28:78.24:0,78,1213	0/0:7,0:7:21.07:0,21,333
chr10	81870135	.	AT	A	3650.02	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.929;DP=566;FS=1.699;HRun=7;HaplotypeScore=77.9982;InbreedingCoeff=0.9948;MQ=72.93;MQ0=0;MQRankSum=-0.695;QD=26.64;ReadPosRankSum=1.617;VQSLOD=4.3981;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.13:0,57,686	0/0:12,0:12:30.10:0,30,377	0/0:10,0:10:24.07:0,24,285	0/0:9,0:9:20.93:0,21,201	0/0:32,0:32:87.26:0,87,1069	1/1:1,22:23:66.15:673,66,0	0/0:19,0:19:54.17:0,54,679	0/0:23,0:23:60.18:0,60,744	1/1:0,14:14:42.10:428,42,0	0/0:38,0:38:99:0,105,1300	0/0:19,0:19:51.15:0,51,628	1/1:1,16:17:48.11:490,48,0	1/1:2,23:25:54.12:551,54,0	1/1:2,21:23:60.14:612,60,0	0/0:25,0:25:75.24:0,75,944	0/0:22,0:21:60.19:0,60,755	0/0:31,0:31:90.26:0,90,1099	0/0:8,0:8:21.02:0,21,246	0/0:11,0:11:24.08:0,24,302	0/0:21,0:21:57.18:0,57,715	0/0:9,0:9:24.08:0,24,302	1/1:1,12:13:32.99:315,33,0	1/1:2,14:16:42.10:428,42,0	1/1:0,6:6:15.03:153,15,0	0/0:28,0:28:84.27:0,84,1057	0/0:32,0:32:96.29:0,96,1185	0/0:41,0:40:99:0,120,1488	0/0:19,0:19:54.17:0,54,680
chr10	81870965	.	TACA	T	5961.15	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.223;DP=565;FS=3.308;HRun=0;HaplotypeScore=79.4753;InbreedingCoeff=0.9955;MQ=58.51;MQ0=1;MQRankSum=-1.220;QD=34.66;ReadPosRankSum=2.194;VQSLOD=5.4051;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:78.27:0,78,1697	0/0:10,0:10:21.06:0,21,416	0/0:10,0:7:15.05:0,15,327	0/0:12,0:11:30.08:0,30,565	0/0:25,0:25:60.16:0,60,1257	1/1:6,22:27:63.15:969,63,0	0/0:16,0:16:48.16:0,48,1044	0/0:29,0:29:66.22:0,66,1400	1/1:4,14:17:33.11:519,33,0	0/0:28,0:28:75.25:0,75,1546	0/0:13,0:13:30.06:0,30,603	1/1:1,14:15:33.11:523,33,0	1/1:7,20:26:57.19:903,57,0	1/1:1,26:26:63.21:999,63,0	0/0:24,0:23:63.20:0,63,1331	0/0:21,0:21:45.15:0,45,978	0/0:28,0:28:78.20:0,78,1575	0/0:10,0:10:27.06:0,27,544	0/0:20,0:19:57.19:0,57,1187	0/0:32,0:32:84.25:0,84,1779	0/0:14,0:14:39.13:0,39,829	1/1:4,11:15:38.64:610,39,0	1/1:5,13:17:39.13:617,39,0	1/1:8,16:23:57.07:822,57,0	0/0:17,0:17:45.13:0,45,935	0/0:22,0:22:57.18:0,57,1201	0/0:23,0:23:66.23:0,66,1436	0/0:7,0:7:21.07:0,21,457
chr10	81870970	.	CAA	C	613.17	PASS	AB=0.962;AC=10;AF=0.179;AN=56;BaseQRankSum=16.064;DP=558;FS=2.144;HRun=2;HaplotypeScore=86.0157;InbreedingCoeff=0.2881;MQ=56.80;MQ0=0;MQRankSum=2.032;QD=3.63;ReadPosRankSum=4.109;VQSLOD=-0.7470;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.27:0,84,1636	0/0:9,0:9:24.05:0,24,436	0/0:9,0:7:21.07:0,21,383	0/0:13,0:12:36.10:0,36,657	0/0:27,0:27:72.12:0,72,1308	0/1:27,1:27:20.34:121,0,20	0/0:17,0:17:51.17:0,51,1002	0/0:26,0:26:78.24:0,78,1452	0/1:17,0:16:12.10:59,0,12	0/0:28,0:28:81.28:0,81,1552	0/0:11,0:11:30.03:0,30,565	1/1:14,0:14:27.45:95,27,0	0/1:25,0:24:30.43:107,0,30	1/1:27,0:26:16.49:142,16,0	0/0:25,0:24:69.24:0,69,1368	0/0:19,0:19:57.12:0,57,1010	0/0:29,0:29:87.20:0,87,1655	0/0:10,0:10:27.09:0,27,529	0/0:22,0:21:60.20:0,60,1177	0/0:31,0:31:83.22:0,83,1680	0/0:13,0:13:39.13:0,39,782	0/1:16,3:19:12.52:81,0,13	0/1:16,1:17:21.19:77,0,21	0/1:22,0:21:20.70:86,0,21	0/0:16,0:16:48.16:0,48,914	0/0:22,0:22:54.15:0,54,1162	0/0:25,0:25:72.25:0,72,1440	0/0:7,0:7:21.07:0,21,426
chr10	81871060	.	C	CTT	5279.55	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-9.030;DP=546;FS=14.880;HRun=9;HaplotypeScore=65.6275;InbreedingCoeff=0.9863;MQ=74.32;MQ0=0;MQRankSum=-0.370;QD=31.24;ReadPosRankSum=0.089;VQSLOD=3.4201;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:51.05:0,51,523	0/0:13,0:13:33.08:0,33,351	0/0:13,0:13:20.97:0,21,223	0/0:9,0:9:21.04:0,21,221	0/0:35,0:35:84.18:0,84,886	1/1:5,23:31:61.67:857,62,0	0/0:9,0:9:24.04:0,24,255	0/0:29,0:29:63.13:0,63,671	1/1:7,7:13:30.06:435,30,0	0/0:25,0:25:66.15:0,66,702	0/0:18,0:18:50.61:0,51,520	1/1:0,14:15:33.11:501,33,0	1/1:4,26:32:36.79:946,37,0	1/1:4,19:24:59.90:863,60,0	0/0:23,0:23:54.11:0,54,575	0/0:29,0:29:75.06:0,75,768	0/0:23,0:23:48.55:0,49,502	0/0:8,0:8:16.40:0,16,189	0/0:12,0:12:33.06:0,33,343	0/0:32,0:32:75.17:0,75,791	0/0:15,0:15:39.05:0,39,399	1/1:2,20:22:45.07:632,45,0	1/1:1,12:15:29.59:424,30,0	1/1:2,14:16:42.10:620,42,0	0/0:15,0:15:36.05:0,36,375	0/0:15,0:15:39.08:0,39,415	0/0:28,0:27:75.17:0,75,798	0/0:5,0:5:9.02:0,9,96
chr10	81871250	.	AACACAC	A	724.23	PASS	AB=0.667;AC=7;AF=0.125;AN=56;BaseQRankSum=2.876;DP=480;FS=1.092;HRun=0;HaplotypeScore=124.4185;InbreedingCoeff=0.5167;MQ=63.30;MQ0=6;MQRankSum=-4.676;QD=14.48;ReadPosRankSum=2.289;VQSLOD=3.1302;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:26:12.04:0,12,282	0/0:4,0:6:9.03:0,9,247	0/0:23,0:16:3.01:0,3,86	0/0:26,0:19:5.98:0,6,60	0/0:18,0:20:2.72:0,3,78	0/0:21,0:22:48.15:0,48,1408	0/1:5,5:10:14.94:115,0,15	0/0:22,0:21:30.05:0,30,714	0/0:11,0:11:18.06:0,18,532	0/0:17,0:17:27.09:0,27,753	0/0:17,0:16:6.02:0,6,188	0/0:14,0:14:21.07:0,21,685	1/1:7,11:18:24.08:493,24,0	1/1:9,6:15:6.02:124,6,0	0/0:25,0:25:0.24:0,0,1	0/0:16,0:16:6.49:0,6,171	0/0:19,0:21:9.03:0,9,234	0/0:13,0:13:9.03:0,9,226	0/0:18,0:17:27.09:0,27,696	0/0:23,0:23:20.87:0,21,463	0/0:17,0:16:6.49:0,6,174	1/1:2,5:7:6.02:124,6,0	0/0:14,0:14:21.07:0,21,553	0/0:12,0:12:18.03:0,18,428	0/0:19,0:20:12.04:0,12,328	0/0:14,0:18:42.14:0,42,1063	0/0:21,0:20:21.05:0,21,405	0/0:6,0:6:6.01:0,6,118
chr10	81871389	.	AT	A	12019.32	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.462;DP=464;FS=11.304;HRun=6;HaplotypeScore=47.9792;InbreedingCoeff=0.9423;MQ=83.31;MQ0=0;MQRankSum=-7.887;QD=27.63;ReadPosRankSum=4.451;VQSLOD=4.4645;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:54.13:576,54,0	1/1:2,5:7:15.04:161,15,0	0/0:19,0:19:36.10:0,36,450	0/0:10,0:10:30.09:0,30,377	1/1:1,25:26:72.18:770,72,0	1/1:0,19:19:51.13:548,51,0	1/1:3,12:15:36.09:387,36,0	1/1:2,27:29:81.14:849,81,0	1/1:0,14:14:42.11:451,42,0	1/1:0,21:21:60.15:641,60,0	1/1:2,20:22:60.15:644,60,0	1/1:1,11:12:33.08:355,33,0	1/1:0,13:13:30.08:322,30,0	1/1:1,22:23:60.15:644,60,0	1/1:2,15:17:42.10:450,42,0	1/1:2,15:17:42.10:451,42,0	1/1:3,23:26:66.16:709,66,0	1/1:0,15:15:42.11:451,42,0	1/1:3,10:13:30.01:292,30,0	1/1:2,19:21:51.12:546,51,0	1/1:0,7:7:18.05:193,18,0	1/1:1,11:12:30.07:322,30,0	1/1:1,9:10:24.06:258,24,0	1/1:1,5:6:12.03:129,12,0	1/1:1,15:16:45.11:484,45,0	1/1:2,20:22:60.15:645,60,0	1/1:2,24:26:60.15:645,60,0	1/1:0,4:4:9.02:97,9,0
chr10	81871577	.	T	TA	1790.17	PASS	AB=0.976;AC=21;AF=0.389;AN=54;BaseQRankSum=-5.065;DP=331;FS=14.062;HRun=12;HaplotypeScore=37.2587;InbreedingCoeff=0.6690;MQ=71.47;MQ0=0;MQRankSum=0.754;QD=11.12;ReadPosRankSum=-1.655;VQSLOD=0.7701;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:25:51.08:496,51,0	0/0:2,0:2:5.97:0,6,44	0/1:12,0:10:4.24:4,0,15	0/1:8,0:6:5.19:5,0,16	0/0:11,0:11:17.85:0,18,131	1/1:6,10:16:18.03:175,18,0	0/0:14,0:14:29.79:0,30,219	1/1:11,25:37:72.38:649,72,0	1/1:3,8:11:21.03:204,21,0	0/0:4,0:4:5.95:0,6,44	0/0:6,0:7:10.66:0,11,71	1/1:1,6:7:9.01:88,9,0	1/1:2,0:7:2.84:14,3,0	1/1:2,0:11:14.16:70,14,0	0/0:8,0:9:13.92:0,14,93	0/1:12,1:13:14.31:14,0,73	0/0:19,1:20:21.50:0,21,321	0/0:15,0:15:26.53:0,27,196	0/0:17,0:19:27.85:0,28,185	0/0:12,1:13:0.65:0,1,168	0/0:15,0:15:32.75:0,33,241	./.	1/1:2,4:6:12.02:117,12,0	1/1:2,6:8:15.02:146,15,0	0/0:11,0:11:20.83:0,21,153	0/0:14,0:14:29.79:0,30,219	0/0:12,0:12:23.84:0,24,175	0/0:4,0:4:5.91:0,6,44
chr10	81872071	.	TGCTATA	T	6977.59	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.415;DP=686;FS=34.195;HRun=0;HaplotypeScore=216.8959;InbreedingCoeff=0.9860;MQ=86.90;MQ0=0;MQRankSum=-15.598;QD=50.20;ReadPosRankSum=3.680;VQSLOD=3.4707;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,4353	0/0:11,0:11:33.11:0,33,913	0/0:26,0:26:75.26:0,75,2416	0/0:29,0:29:78.23:0,78,2544	0/0:13,0:13:36.09:0,36,937	1/1:0,22:22:51.18:1189,51,0	0/0:26,0:26:78.27:0,78,2756	0/0:36,0:36:99:0,102,3315	1/1:1,16:17:39.13:921,39,0	0/0:31,0:31:90.25:0,90,2297	0/0:16,0:16:42.62:0,43,1151	1/1:2,25:27:63.22:1484,63,0	1/1:3,19:22:39.13:921,39,0	1/1:1,19:20:45.15:1063,45,0	0/0:54,0:54:99:0,148,3962	0/0:39,0:39:99:0,117,3086	0/0:46,0:46:99:0,138,3749	0/0:17,0:17:48.14:0,48,1209	0/0:21,0:21:60.16:0,60,1517	0/0:12,0:12:30.10:0,30,828	0/0:36,0:36:99:0,99,2659	1/1:0,11:11:33.11:762,33,0	1/1:1,8:9:18.06:425,18,0	1/1:1,10:11:9.03:213,9,0	0/0:17,0:17:42.14:0,42,1151	0/0:38,0:38:99:0,111,2918	0/0:27,0:27:75.26:0,75,2064	0/0:7,0:7:15.05:0,15,421
chr10	81872186	.	CAGGAACACG	C	12918.58	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=17.149;DP=741;FS=10.580;HRun=0;HaplotypeScore=221.5976;InbreedingCoeff=0.9996;MQ=82.77;MQ0=0;MQRankSum=-17.389;QD=79.26;ReadPosRankSum=1.836;VQSLOD=3.9111;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:66:99:0,193,9131	0/0:10,0:10:30.10:0,30,1382	0/0:21,0:21:59.98:0,60,2496	0/0:28,0:28:81.28:0,81,3563	0/0:29,0:29:87.30:0,87,4112	1/1:2,13:15:45.14:1329,45,0	0/0:27,0:27:81.28:0,81,3967	0/0:24,0:24:69.24:0,69,3201	1/1:5,19:24:57.20:1801,57,0	0/0:28,0:28:81.28:0,81,3873	0/0:22,0:22:66.23:0,66,3047	1/1:0,16:17:48.16:1515,48,0	1/1:4,27:30:81.28:2554,81,0	1/1:3,14:17:42.14:1326,42,0	0/0:33,0:33:99:0,99,4715	0/0:30,0:30:90.31:0,90,4223	0/0:53,0:53:99:0,157,7413	0/0:19,0:19:51.18:0,51,2498	0/0:24,0:24:69.24:0,69,3046	0/0:17,0:17:51.18:0,51,2507	0/0:34,0:34:96.33:0,96,4615	1/1:2,14:16:45.15:1396,45,0	1/1:3,24:27:72.25:2274,72,0	1/1:7,9:16:24.08:723,24,0	0/0:17,0:17:51.18:0,51,2412	0/0:39,0:39:99:0,117,5490	0/0:35,0:35:99:0,105,5126	0/0:22,0:22:66.23:0,66,3138
chr10	81872228	.	AC	A	5472.03	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.667;DP=790;FS=6.817;HRun=5;HaplotypeScore=120.1233;InbreedingCoeff=0.9999;MQ=80.12;MQ0=0;MQRankSum=-12.780;QD=28.80;ReadPosRankSum=-0.685;VQSLOD=3.3723;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,138,1846	0/0:13,0:13:39.13:0,39,533	0/0:21,0:21:54.17:0,54,709	0/0:25,0:25:65.96:0,66,823	0/0:35,0:35:99:0,99,1354	1/1:0,25:25:66.19:748,66,0	0/0:27,0:27:78.26:0,78,1066	0/0:37,0:37:99:0,102,1368	1/1:2,24:26:72.21:816,72,0	0/0:35,0:35:96.32:0,96,1313	0/0:22,0:22:66.22:0,66,901	1/1:1,26:27:63.18:714,63,0	1/1:0,26:26:72.21:816,72,0	1/1:2,12:14:33.09:374,33,0	0/0:37,0:37:99:0,108,1459	0/0:37,0:37:99:0,111,1489	0/0:51,0:51:99:0,150,2052	0/0:20,0:20:57.19:0,57,779	0/0:30,0:30:78.26:0,78,1067	0/0:20,0:20:60.19:0,60,804	0/0:35,0:35:99:0,105,1417	1/1:1,17:18:48.14:544,48,0	1/1:2,33:35:99:1121,99,0	1/1:3,16:19:30.02:339,30,0	0/0:24,0:24:60.19:0,60,805	0/0:24,0:24:72.23:0,72,970	0/0:39,0:39:99:0,111,1449	0/0:19,0:19:51.13:0,51,661
chr10	81872913	.	G	GT	4854.80	PASS	AB=0.804;AC=28;AF=0.500;AN=56;BaseQRankSum=-8.793;DP=478;FS=0.785;HRun=11;HaplotypeScore=52.0049;InbreedingCoeff=0.7635;MQ=77.87;MQ0=0;MQRankSum=-0.376;QD=20.14;ReadPosRankSum=-0.500;VQSLOD=5.5292;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:56.65:0,57,427	1/1:1,4:5:12.02:122,12,0	0/0:10,0:10:3.18:0,3,38	0/0:11,0:11:7.08:0,7,38	1/1:3,17:22:30.63:457,31,0	0/0:23,1:24:23.27:0,23,356	0/0:11,0:12:6.85:0,7,184	0/0:28,3:31:2.36:0,2,367	0/0:18,0:18:50.71:0,51,384	1/1:0,20:21:56.48:511,56,0	1/1:3,22:25:39.53:511,40,0	0/0:23,0:24:61.77:0,62,465	0/0:16,0:16:41.63:0,42,310	0/0:23,0:24:64.79:0,65,493	1/1:0,13:15:31.96:343,32,0	1/1:3,12:15:33.04:326,33,0	1/1:3,14:17:27.05:274,27,0	1/1:4,18:23:33.55:479,34,0	0/1:5,9:14:31.58:217,0,32	1/1:2,18:20:33.54:454,34,0	1/1:3,7:10:21.04:213,21,0	0/0:10,0:10:23.87:0,24,182	0/0:13,0:13:5.52:0,6,164	0/0:21,0:21:44.75:0,45,343	1/1:2,15:17:15.84:342,16,0	1/1:1,13:14:36.02:339,36,0	1/1:3,17:20:22.77:252,23,0	0/1:2,0:2:14.49:14,0,17
chr10	81873138	.	CA	C	9719.81	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.558;DP=560;FS=1.974;HRun=9;HaplotypeScore=79.7955;InbreedingCoeff=0.8333;MQ=78.36;MQ0=0;MQRankSum=-7.180;QD=18.24;ReadPosRankSum=4.351;VQSLOD=5.1180;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,7:9:21.01:192,21,0	1/1:2,2:4:6:55,6,0	0/0:15,0:15:2.57:0,3,246	0/0:12,0:12:27.04:0,27,295	1/1:3,28:31:77.98:705,78,0	1/1:1,0:17:26.48:78,26,0	1/1:3,9:12:27:247,27,0	1/1:6,36:42:99:969,108,0	1/1:0,0:19:38.70:114,39,0	1/1:3,31:34:93:838,93,0	1/1:2,35:37:90.02:824,90,0	1/1:1,0:17:28.52:84,29,0	1/1:2,0:17:28.52:84,29,0	1/1:0,0:12:24.44:72,24,0	1/1:2,18:20:48.02:439,48,0	1/1:1,14:15:42.02:384,42,0	1/1:1,14:15:38.96:348,39,0	1/1:4,13:17:39.01:357,39,0	1/1:3,19:22:57.01:515,57,0	1/1:3,25:28:75.04:686,75,0	1/1:1,13:14:36.02:329,36,0	1/1:0,0:24:48.89:144,49,0	1/1:0,0:37:71.30:210,71,0	1/1:1,0:10:16.30:48,16,0	1/1:1,18:19:51.03:467,51,0	1/1:2,21:23:59.99:542,60,0	1/1:0,29:29:81.04:741,81,0	1/1:0,9:9:27.01:247,27,0
chr10	81873554	.	A	AG	12738.92	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-7.795;DP=552;FS=2.467;HRun=2;HaplotypeScore=89.5035;InbreedingCoeff=0.9749;MQ=72.05;MQ0=0;MQRankSum=-1.794;QD=34.71;ReadPosRankSum=4.004;VQSLOD=5.2565;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.14:0,54,633	1/1:0,8:8:24.08:345,24,0	0/0:14,0:13:4.09:0,4,256	0/0:10,0:10:23.68:0,24,249	1/1:5,30:35:84.14:1129,84,0	0/0:30,0:30:90.20:0,90,1047	0/0:6,0:6:18.06:0,18,223	0/0:33,0:33:90.15:0,90,993	0/0:20,0:20:60.14:0,60,701	1/1:1,23:24:69.20:939,69,0	1/1:2,27:29:59.97:769,60,0	0/0:20,0:20:57.18:0,57,704	1/1:0,19:19:51.17:731,51,0	1/1:1,17:18:39.05:534,39,0	1/1:0,15:15:36.12:517,36,0	1/1:2,22:24:60.20:846,60,0	1/1:1,21:22:42.14:603,42,0	1/1:3,8:11:24.03:320,24,0	1/1:5,16:21:60.17:803,60,0	1/1:1,20:21:57.01:738,57,0	1/1:1,12:13:24.08:345,24,0	1/1:3,23:26:66.22:935,66,0	0/0:23,0:23:63.18:0,63,765	0/0:9,0:9:24.05:0,24,283	1/1:1,11:12:26.87:388,27,0	1/1:1,28:28:87.29:1220,87,0	1/1:2,29:30:84.28:1192,84,0	1/1:0,9:9:27.09:387,27,0
chr10	81873556	.	G	GGT	11383.65	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=9.617;DP=545;FS=1.506;HRun=0;HaplotypeScore=105.9589;InbreedingCoeff=0.9890;MQ=70.63;MQ0=0;MQRankSum=-1.953;QD=31.27;ReadPosRankSum=4.839;VQSLOD=7.0267;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.16:0,54,809	1/1:8,0:8:24.08:299,24,0	0/0:13,0:12:9.44:0,9,361	0/0:8,0:9:24.01:0,24,327	1/1:33,1:34:72.71:1002,73,0	0/0:30,0:30:90.26:0,90,1357	0/0:6,0:6:18.06:0,18,291	0/0:32,0:32:93.19:0,93,1259	0/0:20,0:20:60.17:0,60,903	1/1:26,0:26:70.50:851,70,0	1/1:27,1:28:59.97:723,60,0	0/0:20,0:20:60.18:0,60,941	1/1:20,0:20:51.63:625,52,0	1/1:19,0:19:37.93:448,38,0	1/1:16,0:16:36.59:452,37,0	1/1:21,2:23:60.19:804,60,0	1/1:21,0:21:42.13:513,42,0	1/1:9,1:10:24.07:295,24,0	1/1:21,0:21:56.09:729,56,0	1/1:21,0:21:41.27:650,41,0	1/1:12,0:12:24.07:292,24,0	1/1:23,0:23:66.21:835,66,0	0/0:23,0:23:69.12:0,69,1036	0/0:9,0:9:24.07:0,24,366	1/1:11,0:11:27.09:340,27,0	1/1:28,1:28:87.23:1144,87,0	1/1:30,2:31:84.73:1076,85,0	1/1:10,0:10:27.54:307,28,0
chr10	81873723	.	CA	C	13685.48	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=12.695;DP=697;FS=2.473;HRun=5;HaplotypeScore=73.2734;InbreedingCoeff=0.9994;MQ=80.75;MQ0=0;MQRankSum=-3.646;QD=30.34;ReadPosRankSum=4.675;VQSLOD=5.4224;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:51.15:0,51,679	1/1:1,15:16:39.11:442,39,0	0/0:20,0:20:45.22:0,45,660	0/0:20,0:20:57.18:0,57,728	1/1:1,28:29:78.22:885,78,0	0/0:30,0:30:87.25:0,87,1169	0/0:18,0:18:54.17:0,54,724	0/0:27,0:27:78.26:0,78,1067	0/0:29,0:29:87.25:0,87,1143	1/1:1,39:40:99:1326,117,0	1/1:0,18:18:42.12:476,42,0	0/0:30,0:30:84.28:0,84,1147	1/1:1,21:22:54.15:612,54,0	1/1:0,19:19:54.15:613,54,0	1/1:0,24:24:66.19:749,66,0	1/1:2,25:27:72.21:817,72,0	1/1:0,29:29:78.22:885,78,0	1/1:0,9:9:21.06:238,21,0	1/1:0,15:15:45.09:484,45,0	1/1:7,30:37:84.23:952,84,0	1/1:2,24:26:69.20:783,69,0	1/1:2,22:24:63.18:715,63,0	0/0:19,0:19:54.18:0,54,739	0/0:33,0:33:99:0,99,1333	1/1:1,24:25:60.17:681,60,0	1/1:0,35:35:99:1191,105,0	1/1:0,43:43:99:1395,123,0	1/1:0,13:13:39.11:442,39,0
chr10	81874307	.	GGACCAT	G	26738.22	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-3.833;DP=609;FS=1.431;HRun=0;HaplotypeScore=158.3870;InbreedingCoeff=0.9646;MQ=80.72;MQ0=0;MQRankSum=-19.023;QD=64.12;ReadPosRankSum=4.135;VQSLOD=5.5226;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,4740	1/1:0,8:8:24.08:614,24,0	0/0:19,0:19:57.16:0,57,1588	0/0:26,0:26:75.15:0,75,2324	1/1:0,29:29:60.21:1483,60,0	1/1:0,25:25:60.21:1534,60,0	0/0:12,0:12:36.11:0,36,1202	0/0:25,0:25:75.25:0,75,2730	1/1:0,19:19:54.19:1370,54,0	1/1:0,26:26:78.26:1945,78,0	1/1:0,28:28:69.24:1736,69,0	1/1:1,26:27:66.23:1677,66,0	0/0:19,0:19:57.20:0,57,2078	0/0:25,0:25:75.25:0,75,2670	1/1:0,33:33:87.30:2194,87,0	1/1:0,36:36:96.33:2435,96,0	1/1:0,13:13:24.08:613,24,0	1/1:0,3:3:6.02:153,6,0	1/1:0,19:19:54.19:1343,54,0	1/1:0,29:29:72.25:1831,72,0	1/1:0,14:14:33.11:799,33,0	0/0:23,0:23:69.22:0,69,2445	1/1:1,25:26:69.23:1689,69,0	1/1:0,12:12:27.09:679,27,0	1/1:0,36:36:99:2502,99,0	1/1:0,13:13:39.13:990,39,0	1/1:0,19:19:39.13:997,39,0	1/1:0,2:2:6.02:154,6,0
chr10	81874890	.	AT	A	1067.45	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.063;DP=588;FS=4.340;HRun=3;HaplotypeScore=92.4845;InbreedingCoeff=0.9280;MQ=81.05;MQ0=0;MQRankSum=-2.319;QD=32.35;ReadPosRankSum=-4.188;VQSLOD=1.8596;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.22:0,66,948	0/0:9,0:9:23.92:0,24,186	0/0:15,0:15:42.14:0,42,591	0/0:18,0:18:42.14:0,42,592	0/0:30,0:30:89.82:0,90,745	0/0:29,0:29:87.29:0,87,1252	0/0:9,0:9:26.90:0,27,211	1/1:1,32:33:96.27:1162,96,0	0/0:16,0:16:48.15:0,48,670	0/0:36,0:36:99:0,107,750	0/0:29,0:29:83.88:0,84,712	0/0:19,0:19:57.19:0,57,820	0/0:19,0:19:54.18:0,54,776	0/0:18,0:18:54.18:0,54,775	0/0:27,0:27:80.74:0,81,632	0/0:30,0:30:86.49:0,86,661	0/0:14,0:14:38.91:0,39,322	0/0:5,0:5:14.98:0,15,129	0/0:20,0:20:53.17:0,53,399	0/0:33,0:33:98.88:0,99,863	0/0:18,0:18:53.80:0,54,418	0/0:19,0:19:57.19:0,57,820	0/0:24,0:24:69.23:0,69,993	0/0:14,0:14:42.14:0,42,605	0/0:22,0:22:62.89:0,63,536	0/0:23,0:23:65.27:0,65,470	0/0:34,0:34:99:0,102,822	0/0:3,0:3:9.01:0,9,84
chr10	81875259	.	TGAAGA	T	11933.15	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=15.218;DP=398;FS=3.596;HRun=0;HaplotypeScore=125.6804;InbreedingCoeff=0.9654;MQ=72.76;MQ0=0;MQRankSum=-15.074;QD=53.04;ReadPosRankSum=1.219;VQSLOD=5.4181;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:27.09:0,27,823	1/1:0,6:6:18.06:401,18,0	0/0:22,0:22:66.12:0,66,1868	0/0:19,0:19:54.12:0,54,1389	1/1:2,17:19:41.80:934,42,0	0/0:27,0:27:78.25:0,78,2379	1/1:1,9:10:21.07:464,21,0	1/1:1,26:27:72.13:1510,72,0	0/0:14,0:14:42.14:0,42,1315	1/1:0,19:19:54.13:1152,54,0	1/1:2,16:18:36.12:801,36,0	0/0:10,0:10:27.09:0,27,849	0/0:16,0:16:48.16:0,48,1429	0/0:13,0:13:39.13:0,39,1218	1/1:1,19:20:51.18:1121,51,0	1/1:0,13:13:36.12:788,36,0	1/1:2,6:8:9.03:198,9,0	1/1:0,3:3:9.03:200,9,0	1/1:0,9:9:27.08:559,27,0	1/1:0,16:16:39.13:868,39,0	1/1:0,7:7:6.02:133,6,0	0/0:7,0:7:21.07:0,21,678	0/0:18,0:18:54.17:0,54,1607	0/0:18,0:18:51.14:0,51,1464	1/1:0,21:21:45.15:1002,45,0	1/1:0,9:9:27.09:601,27,0	1/1:0,11:11:27.09:601,27,0	1/1:0,9:9:27.09:601,27,0
chr10	81877277	.	GT	G	10234.96	PASS	AC=32;AF=0.593;AN=54;BaseQRankSum=9.110;DP=511;FS=2.456;HRun=4;HaplotypeScore=76.9793;InbreedingCoeff=0.9911;MQ=72.33;MQ0=1;MQRankSum=-5.743;QD=32.70;ReadPosRankSum=0.963;VQSLOD=5.4873;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:66.21:0,66,907	1/1:1,9:10:27.08:324,27,0	0/0:12,0:12:33.11:0,33,448	0/0:16,0:16:42.07:0,42,529	1/1:1,33:34:96.28:1140,96,0	0/0:19,0:18:51.17:0,51,713	1/1:1,17:18:48.15:576,48,0	1/1:2,21:23:63.19:756,63,0	0/0:22,0:22:63.16:0,63,837	1/1:1,20:21:57.13:667,57,0	1/1:3,11:14:36.11:432,36,0	0/0:15,0:15:42.10:0,42,566	0/0:19,0:19:57.14:0,57,740	0/0:16,0:16:45.15:0,45,630	1/1:2,19:21:57.17:675,57,0	1/1:3,7:10:27.08:324,27,0	1/1:0,12:12:33.10:396,33,0	1/1:0,4:4:9.03:106,9,0	1/1:0,15:15:45.13:529,45,0	1/1:3,24:27:69.21:825,69,0	1/1:0,16:16:39.12:468,39,0	0/0:14,0:14:42.13:0,42,571	0/0:25,0:25:75.24:0,75,1032	0/0:17,0:17:42.14:0,42,588	1/1:2,40:42:99:1400,117,0	1/1:1,26:27:78.24:936,78,0	1/1:0,19:19:57.17:683,57,0	./.
chr10	81877317	.	GC	G	1558.52	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=8.060;DP=421;FS=1.743;HRun=9;HaplotypeScore=117.8578;InbreedingCoeff=0.8210;MQ=61.48;MQ0=8;MQRankSum=-4.702;QD=6.66;ReadPosRankSum=0.088;VQSLOD=1.5038;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,11:17:17.59:165,18,0	1/1:11,0:11:19.29:163,19,0	0/0:19,0:13:26.96:0,27,268	0/0:28,0:20:42.58:0,43,463	1/1:18,0:18:11.79:83,12,0	0/0:13,0:13:33.04:0,33,355	0/0:20,0:20:42.55:0,43,470	1/1:3,0:7:8.69:28,9,0	0/0:18,0:17:33.10:0,33,377	1/1:18,0:18:24.25:149,24,0	1/1:12,0:12:4.80:54,5,0	0/0:11,0:11:12.04:0,12,138	0/0:18,0:18:39.98:0,40,433	0/0:10,0:10:18.01:0,18,192	1/1:14,1:14:11.69:74,12,0	0/1:9,0:7:9.70:28,0,10	1/1:13,1:14:17.92:141,18,0	1/1:1,0:1:2.98:21,3,0	1/1:12,2:12:16.23:122,16,0	1/1:17,1:16:14.69:99,15,0	1/1:15,2:16:9:82,9,0	0/0:14,0:14:24.07:0,24,275	0/0:18,1:19:6.09:0,6,307	0/0:16,0:16:27.35:0,27,242	1/1:26,0:26:20.22:164,20,0	1/1:19,0:16:32.72:209,33,0	1/1:13,0:13:17.86:139,18,0	1/1:3,0:3:6:54,6,0
chr10	81877325	.	C	CT	2756.57	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=6.930;DP=420;FS=7.732;HRun=0;HaplotypeScore=115.8279;InbreedingCoeff=0.8427;MQ=55.41;MQ0=21;MQRankSum=-4.440;QD=12.42;ReadPosRankSum=2.108;VQSLOD=4.3956;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:15:5.19:11,0,5	1/1:0,11:11:23.95:261,24,0	0/0:16,0:10:25.87:0,26,295	0/0:23,0:15:42.59:0,43,543	1/1:2,11:13:12.01:133,12,0	0/0:14,0:13:33.05:0,33,420	0/0:22,0:22:45.57:0,46,585	0/0:7,0:6:16.60:0,17,82	0/0:20,0:18:33.11:0,33,447	1/1:4,11:15:32.95:364,33,0	1/1:4,10:13:15.02:180,15,0	0/0:10,0:10:12.04:0,12,166	0/0:19,0:19:39.31:0,39,480	0/0:14,0:12:13.60:0,14,180	1/1:3,12:13:11.16:159,11,0	1/1:2,7:7:3.71:77,4,0	1/1:2,5:14:14.10:220,14,0	1/1:1,1:1:3.01:41,3,0	1/1:3,7:9:27.05:325,27,0	1/1:5,13:16:17.18:160,17,0	1/1:8,2:18:9:82,9,0	0/0:19,0:17:8.20:0,8,314	0/0:16,0:16:28.55:0,29,381	0/0:18,0:18:29.45:0,29,288	1/1:3,21:24:20.52:229,21,0	1/1:5,15:18:41.03:465,41,0	1/1:5,6:11:14.50:205,15,0	1/1:1,3:3:6.01:64,6,0
chr10	81877328	.	CTGTGTGTGTG	C	2425.86	PASS	AB=0.946;AC=31;AF=0.646;AN=48;BaseQRankSum=6.405;DP=421;FS=12.370;HRun=0;HaplotypeScore=150.8936;InbreedingCoeff=0.3863;MQ=54.81;MQ0=21;MQRankSum=-6.449;QD=9.15;ReadPosRankSum=2.201;VQSLOD=1.4008;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:16:9.03:0,9,161	1/1:11,0:11:12.04:314,12,0	./.	./.	1/1:12,0:12:2.68:71,3,0	1/1:11,0:11:3.01:70,3,0	0/0:22,0:22:15.05:0,15,376	0/0:8,0:7:3.01:0,3,79	1/1:11,7:17:9.03:247,9,0	1/1:16,0:15:8.30:154,8,0	0/1:15,0:13:31.93:77,0,32	1/1:7,4:11:3.01:89,3,0	0/0:16,0:21:17.05:0,17,341	0/0:14,0:13:27.08:0,27,1005	1/1:15,0:13:3.01:34,3,0	./.	1/1:16,0:16:3.15:201,3,0	./.	1/1:11,0:9:8.72:190,9,0	1/1:18,0:16:5.76:165,6,0	0/1:18,0:15:0:0,0,0	0/0:15,0:20:14.63:0,15,548	1/1:12,2:14:3.01:71,3,0	0/1:12,7:19:0.01:0,0,0	1/1:23,0:23:11.98:316,12,0	0/1:18,0:15:26.68:126,0,27	0/1:13,0:12:19.96:312,0,20	1/1:4,0:3:6.02:144,6,0
chr10	81877364	.	GTGTGTGTGTGTGTC	G	4233.62	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=3.079;DP=422;FS=14.009;HRun=0;HaplotypeScore=163.0293;InbreedingCoeff=0.6635;MQ=47.17;MQ0=17;MQRankSum=-3.443;QD=19.42;ReadPosRankSum=3.021;VQSLOD=3.1354;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:33.06:0,33,662	1/1:5,1:6:18.03:451,18,0	0/0:23,0:10:28.57:0,29,257	0/0:25,0:10:19.97:0,20,199	1/1:12,0:12:6.26:88,6,0	0/1:9,0:9:35.16:39,0,35	0/0:21,0:21:15.05:0,15,437	0/0:20,0:20:40.88:0,41,515	1/1:16,0:15:7.08:60,7,0	1/1:13,0:13:21.98:357,22,0	1/1:14,1:14:11.97:200,12,0	0/0:8,0:8:1.45:0,1,97	0/0:18,0:17:29.30:0,29,661	0/0:15,0:13:36.08:0,36,1492	1/1:10,0:9:11.98:116,12,0	1/1:10,0:8:14.65:159,15,0	1/1:15,0:15:25.85:384,26,0	0/1:7,0:7:31.67:46,0,32	1/1:7,1:7:9.51:335,10,0	1/1:14,0:14:24.62:348,25,0	1/1:13,0:10:2.99:24,3,0	0/0:20,0:18:29.14:0,29,1205	0/0:7,0:7:7.60:0,8,59	0/0:25,0:24:12.38:0,12,133	1/1:17,1:18:17.74:470,18,0	0/1:25,0:23:99:230,0,116	1/1:16,2:17:29.45:760,29,0	1/1:8,0:8:17.37:165,17,0
chr10	81877366	.	GTGTGTGTGTGTC	G	4962.39	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=3.427;DP=412;FS=11.459;HRun=0;HaplotypeScore=146.9784;InbreedingCoeff=0.6755;MQ=47.87;MQ0=15;MQRankSum=-4.549;QD=22.56;ReadPosRankSum=3.768;VQSLOD=2.8785;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:36.03:0,36,510	1/1:3,3:6:18.03:467,18,0	0/0:25,0:12:34.59:0,35,327	0/0:23,0:10:19.97:0,20,199	1/1:11,0:11:14.67:222,15,0	0/1:8,0:8:35.31:76,0,35	0/0:23,0:23:15.05:0,15,375	0/0:20,0:20:34.59:0,35,434	1/1:16,0:15:9.03:152,9,0	1/1:10,2:12:24.41:340,24,0	1/1:11,0:10:8.96:173,9,0	0/1:10,0:10:18.73:19,0,108	0/0:18,0:17:28.71:0,29,550	0/0:16,0:14:36.08:0,36,1327	1/1:9,0:8:11.98:125,12,0	1/1:8,0:8:17.91:162,18,0	1/1:13,1:14:32.36:436,32,0	1/1:8,0:7:10.40:76,10,0	1/1:6,1:6:14.62:338,15,0	1/1:13,1:14:26.64:363,27,0	1/1:12,0:9:2.99:24,3,0	0/0:20,0:18:32.88:0,33,1090	0/1:7,0:7:7.52:8,0,40	0/0:25,0:24:15.63:0,16,135	1/1:14,3:17:24.85:524,25,0	0/1:24,0:22:2.69:430,0,3	1/1:17,1:17:31.66:757,32,0	1/1:8,0:8:20.88:271,21,0
chr10	81877368	.	GTGTGTGTGTC	G	4872.97	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=3.920;DP=400;FS=15.214;HRun=0;HaplotypeScore=129.3432;InbreedingCoeff=0.6527;MQ=49.28;MQ0=15;MQRankSum=-2.863;QD=23.89;ReadPosRankSum=3.965;VQSLOD=3.3646;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:44.97:0,45,462	1/1:6,0:6:18.03:425,18,0	0/0:25,0:12:34.59:0,35,327	0/0:24,0:11:22.98:0,23,236	1/1:7,1:8:15:232,15,0	0/1:8,0:8:35.24:43,0,35	0/0:24,0:24:15.03:0,15,256	0/0:19,0:19:37.59:0,38,458	1/1:15,0:14:9.03:194,9,0	1/1:11,0:11:25.18:318,25,0	0/1:10,0:9:18.33:127,0,18	0/1:9,0:9:55.97:56,0,85	0/0:18,0:17:28.68:0,29,439	0/0:16,0:14:33.06:0,33,1091	1/1:6,0:5:11.98:122,12,0	1/1:7,0:7:17.90:139,18,0	1/1:15,0:15:35.35:463,35,0	1/1:8,0:7:14.81:98,15,0	1/1:6,0:5:14.94:270,15,0	1/1:11,1:12:26.91:361,27,0	1/1:13,0:10:2.99:24,3,0	0/0:20,0:18:32.62:0,33,920	0/1:7,0:7:42.16:42,0,61	0/0:25,0:24:19.17:0,19,160	1/1:14,0:14:28.38:508,28,0	1/1:21,2:22:51.25:557,51,0	1/1:18,0:17:29.15:609,29,0	1/1:6,2:8:20.88:286,21,0
chr10	81877376	.	GTC	G	2571.18	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=2.494;DP=403;FS=7.208;HRun=0;HaplotypeScore=97.0161;InbreedingCoeff=0.8811;MQ=59.13;MQ0=10;MQRankSum=-2.043;QD=13.68;ReadPosRankSum=2.496;VQSLOD=3.0978;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:35.89:0,36,285	1/1:7,0:7:20.96:173,21,0	0/0:30,0:17:42.34:0,42,424	0/0:27,0:14:28.98:0,29,296	1/1:8,0:8:14.98:122,15,0	0/0:11,0:11:16.49:0,16,122	1/1:2,17:19:6.01:71,6,0	0/0:22,0:22:45.27:0,45,490	0/0:16,0:15:7.66:0,8,36	1/1:10,0:10:19.72:141,20,0	1/1:10,0:10:11.37:83,11,0	0/0:10,0:10:16.54:0,17,129	0/0:15,0:14:24.31:0,24,197	0/0:13,0:11:27.04:0,27,362	1/1:9,0:8:17.95:143,18,0	1/1:9,1:10:23.89:187,24,0	1/1:16,0:16:38.64:282,39,0	1/1:7,0:6:14.81:98,15,0	0/1:7,0:6:2.05:68,0,2	1/1:14,0:14:32.87:262,33,0	1/1:11,0:10:2.99:24,3,0	0/0:18,0:16:29.57:0,30,343	0/0:7,0:7:8.88:0,9,74	0/0:26,0:26:23.55:0,24,188	1/1:15,0:15:29.97:252,30,0	1/1:20,0:19:53.45:392,53,0	1/1:18,0:18:36.44:333,36,0	1/1:7,0:7:20.86:158,21,0
chr10	81877511	.	TTTTTTTTTTTGGTTCTTTTTTTCGG	T	288.79	PASS	AC=16;AF=0.381;AN=42;BaseQRankSum=1.526;DP=233;FS=2.527;HRun=0;HaplotypeScore=153.6675;InbreedingCoeff=0.7010;MQ=75.30;MQ0=22;MQRankSum=1.291;QD=12.56;ReadPosRankSum=-4.714;VQSLOD=0.7237;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:34:84.29:0,84,6504	./.	0/0:27,0:16:38.88:0,39,1231	0/0:21,0:8:22.59:0,23,641	./.	0/0:8,0:7:18.06:0,18,1102	./.	1/1:3,5:5:14.96:164,15,0	0/0:17,0:16:39.13:0,39,2543	./.	1/1:1,0:1:2.96:19,3,0	0/0:4,0:4:12.04:0,12,774	0/0:14,0:12:33.11:0,33,2488	0/0:16,0:14:36.12:0,36,2933	0/0:2,0:1:0:0,0,0	1/1:2,0:2:5.90:37,6,0	0/0:2,0:1:0:0,0,0	1/1:2,0:1:3.01:38,3,0	1/1:2,0:1:3.01:53,3,0	1/1:2,0:2:3.90:52,4,0	1/1:5,0:3:2.93:20,3,0	0/0:10,0:8:21.07:0,21,1588	0/0:21,0:21:54.19:0,54,4033	0/0:26,0:25:50.26:0,50,3694	1/1:1,0:1:3.01:49,3,0	./.	./.	./.
chr10	81877784	.	A	AGAAG	6166.62	PASS	AC=46;AF=0.958;AN=48;BaseQRankSum=-1.798;DP=417;FS=0.000;HRun=0;HaplotypeScore=86.9036;InbreedingCoeff=0.4368;MQ=59.06;MQ0=8;MQRankSum=-0.007;QD=17.32;ReadPosRankSum=0.726;VQSLOD=4.2740;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,9:18:21.03:439,21,0	1/1:5,0:5:12.03:202,12,0	./.	./.	1/1:18,0:18:23.81:247,24,0	1/1:14,0:19:9.02:132,9,0	0/0:8,0:8:9.02:0,9,94	./.	1/1:9,0:9:20.96:232,21,0	1/1:16,0:16:20.99:294,21,0	1/1:16,0:16:26.80:294,27,0	1/1:6,0:10:6.02:106,6,0	1/1:6,9:16:21.07:489,21,0	1/1:8,5:14:15.05:320,15,0	1/1:16,0:16:21.03:416,21,0	1/1:12,0:12:15:260,15,0	1/1:24,0:23:29.08:538,29,0	./.	1/1:16,0:15:6.01:87,6,0	1/1:26,0:25:33.47:470,33,0	1/1:13,0:13:2.54:36,3,0	1/1:3,0:3:6:52,6,0	1/1:14,1:22:5.91:101,6,0	1/1:13,0:13:12.01:164,12,0	1/1:24,0:24:30.09:636,30,0	1/1:22,0:21:32.93:416,33,0	1/1:18,0:17:9.03:146,9,0	1/1:6,0:6:6.02:91,6,0
chr10	81877832	.	GGAAA	G	3609.66	PASS	AB=0.963;AC=19;AF=0.339;AN=56;BaseQRankSum=-7.725;DP=484;FS=43.559;HRun=0;HaplotypeScore=108.6188;InbreedingCoeff=-0.0312;MQ=58.92;MQ0=8;MQRankSum=2.432;QD=11.83;ReadPosRankSum=-5.939;VQSLOD=-0.6503;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:59.93:0,60,781	0/0:4,0:4:9.01:0,9,96	0/0:8,0:3:9:0,9,83	0/0:11,0:8:24:0,24,241	0/1:22,0:21:99:182,0,167	0/0:28,0:28:69.03:0,69,807	0/1:1,17:18:5.97:148,0,6	1/1:27,0:23:65.88:580,66,0	0/0:15,0:15:41.76:0,42,509	0/1:18,0:18:99:185,0,161	0/1:21,0:20:99:213,0,194	0/0:13,0:13:27.03:0,27,307	0/0:23,0:23:60.10:0,60,843	0/0:16,0:16:42.06:0,42,607	0/1:15,0:15:68.95:69,0,165	0/1:12,0:12:99:114,0,124	0/1:30,0:30:99:312,0,154	1/1:5,0:5:14.95:118,15,0	0/1:10,0:10:27.25:167,0,27	0/1:32,0:31:99:367,0,197	1/1:20,0:20:19.20:333,19,0	0/0:9,0:9:24.02:0,24,260	0/0:16,0:16:38.94:0,39,401	0/0:13,0:13:35.79:0,36,370	0/1:22,0:22:99:205,0,197	0/1:30,0:29:99:290,0,310	0/1:15,0:15:56.43:204,0,56	0/1:8,0:8:49.64:124,0,50
chr10	81877836	.	A	AAG	716.75	PASS	AB=0.878;AC=12;AF=0.214;AN=56;BaseQRankSum=8.122;DP=483;FS=49.513;HRun=0;HaplotypeScore=103.6313;InbreedingCoeff=-0.2774;MQ=61.61;MQ0=5;MQRankSum=0.744;QD=3.17;ReadPosRankSum=-1.018;VQSLOD=0.2102;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:65.71:0,66,812	0/1:2,2:4:24.98:55,0,25	0/0:9,0:4:12.02:0,12,171	0/0:13,0:10:30.07:0,30,410	0/1:21,0:22:29.66:30,0,245	0/0:27,0:27:71.72:0,72,1110	0/0:18,0:18:11.53:0,12,91	0/0:26,0:25:28.42:0,28,364	0/0:16,0:16:35.01:0,35,638	0/1:18,0:18:36.37:36,0,205	0/1:19,0:21:34.85:35,0,273	0/0:13,0:13:32.68:0,33,453	0/0:22,0:22:58.58:0,59,748	0/0:15,0:15:41.85:0,42,547	0/1:8,4:12:85.89:132,0,86	0/1:11,1:12:47.25:47,0,143	0/1:21,6:28:99:147,0,280	0/0:5,0:5:10.73:0,11,81	0/1:11,0:11:25.44:25,0,130	0/1:27,0:30:76.91:77,0,365	0/0:23,0:23:10.39:0,10,291	0/0:9,0:9:26.95:0,27,377	0/0:17,0:17:44.09:0,44,635	0/0:13,0:13:38.89:0,39,513	0/1:17,4:21:99:230,0,159	0/1:25,0:27:8.82:9,0,356	0/1:15,0:16:44.15:44,0,155	0/0:8,0:8:20.73:0,21,145
chr10	81878814	.	T	TA	8430.10	PASS	AB=0.786;AC=32;AF=0.571;AN=56;BaseQRankSum=-7.999;DP=473;FS=0.362;HRun=7;HaplotypeScore=49.1082;InbreedingCoeff=0.8406;MQ=68.27;MQ0=0;MQRankSum=0.619;QD=29.58;ReadPosRankSum=0.842;VQSLOD=5.1476;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:53.98:0,54,521	1/1:0,9:9:24.07:290,24,0	0/1:6,0:6:16.25:16,0,53	0/0:4,0:4:9.01:0,9,87	1/1:2,22:24:69.20:823,69,0	0/0:24,0:24:57.08:0,57,550	1/1:3,0:15:31.63:161,32,0	0/0:23,0:23:54.07:0,54,518	0/0:17,0:17:48.07:0,48,463	1/1:3,25:28:75.23:903,75,0	1/1:4,31:35:93.20:1086,93,0	0/0:16,0:16:45.05:0,45,424	0/0:16,0:16:42.07:0,42,405	0/0:18,0:18:45.06:0,45,435	1/1:2,16:18:42.13:507,42,0	0/1:4,12:16:12.81:423,0,13	1/1:0,14:14:36.11:435,36,0	1/1:1,6:7:18.05:214,18,0	1/1:1,21:22:66.19:780,66,0	1/1:3,12:15:36.04:403,36,0	1/1:2,5:7:18.06:217,18,0	0/0:19,0:19:54.09:0,54,522	0/0:15,0:15:42.06:0,42,400	0/0:15,0:15:39.05:0,39,377	1/1:0,21:21:60.18:725,60,0	1/1:2,22:24:63.19:758,63,0	1/1:2,19:21:48.15:580,48,0	1/1:0,3:3:9.03:109,9,0
chr10	81878922	.	TG	T	217.34	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.029;DP=428;FS=1.234;HRun=4;HaplotypeScore=67.0153;InbreedingCoeff=0.7910;MQ=61.39;MQ0=10;MQRankSum=-4.197;QD=18.11;ReadPosRankSum=0.228;VQSLOD=3.0704;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:72.22:0,72,988	0/0:3,0:3:9.03:0,9,126	0/0:29,0:9:18.42:0,18,227	0/0:27,0:8:6.42:0,6,218	0/0:11,0:11:30.10:0,30,420	0/0:23,0:23:60.20:0,60,840	1/1:1,11:12:27.07:311,27,0	0/0:16,0:16:33.11:0,33,462	0/0:17,0:17:42.14:0,42,586	0/0:13,0:13:39.13:0,39,546	0/0:9,0:9:24.07:0,24,320	0/0:7,0:7:18.06:0,18,252	0/0:15,0:15:42.14:0,42,588	0/0:20,0:20:57.15:0,57,734	0/0:24,0:24:69.22:0,69,940	0/0:11,0:11:33.10:0,33,446	0/0:19,0:18:51.17:0,51,713	0/0:10,0:10:24.05:0,24,314	0/0:13,0:12:36.10:0,36,485	0/0:6,0:6:15.05:0,15,210	0/0:20,0:20:51.17:0,51,714	0/0:3,0:3:9:0,9,105	0/0:12,0:12:30.09:0,30,404	0/0:14,0:14:30.10:0,30,420	0/0:16,0:16:42.13:0,42,570	0/0:19,0:18:51.16:0,51,698	0/0:20,0:20:60.20:0,60,835	0/0:6,0:6:18.06:0,18,252
chr10	81879163	.	TTTTATTTATTTA	T	922.68	PASS	AB=1.000;AC=10;AF=0.185;AN=54;BaseQRankSum=5.497;DP=245;FS=1.750;HRun=0;HaplotypeScore=112.5612;InbreedingCoeff=0.2643;MQ=68.90;MQ0=2;MQRankSum=-4.183;QD=13.98;ReadPosRankSum=-5.990;VQSLOD=0.2873;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:29.59:0,30,563	0/0:5,0:5:9.02:0,9,201	0/0:10,0:7:9.03:0,9,201	0/0:8,0:5:2.04:0,2,6	0/0:7,0:7:12.04:0,12,327	0/1:14,0:14:99:141,0,126	1/1:4,0:4:3.01:36,3,0	1/1:12,15:27:45.14:759,45,0	0/1:4,0:4:31.87:55,0,32	0/0:9,0:9:15.05:0,15,358	0/0:6,0:6:15.05:0,15,340	0/1:6,0:6:16.92:17,0,21	0/1:7,0:7:20.56:21,0,164	0/0:3,0:3:3.01:0,3,84	0/0:3,0:3:3.01:0,3,75	0/0:3,0:3:3.01:0,3,96	0/0:25,0:25:51.08:0,51,1089	0/0:10,0:10:15.02:0,15,321	0/0:12,0:12:21.07:0,21,490	0/0:7,0:7:18.04:0,18,287	0/0:9,0:9:15.05:0,15,360	0/0:4,0:4:6:0,6,106	1/1:4,0:4:3.48:36,3,0	./.	0/0:11,0:11:9.03:0,9,299	0/0:11,0:11:18.05:0,18,391	0/0:13,0:13:18.05:0,18,339	0/0:5,0:5:12.04:0,12,295
chr10	81879192	.	TTTACTTACTTACTTACTTAC	T	2531.30	PASS	AB=1.000;AC=30;AF=0.577;AN=52;BaseQRankSum=-2.475;DP=206;FS=0.000;HRun=0;HaplotypeScore=112.5011;InbreedingCoeff=-0.0397;MQ=48.82;MQ0=11;MQRankSum=-3.530;QD=15.63;ReadPosRankSum=-3.406;VQSLOD=1.2796;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:25.24:61,0,25	0/1:3,0:3:30.98:31,0,104	0/0:4,0:3:3.01:0,3,111	./.	0/0:6,0:8:8.98:0,9,246	1/1:2,15:17:21.07:1113,21,0	1/1:4,0:4:9.03:163,9,0	1/1:22,0:17:4.98:11,5,0	1/1:0,5:5:6.02:322,6,0	0/1:5,0:5:9.95:10,0,288	0/0:2,0:9:20.81:0,21,272	1/1:0,7:7:3.01:152,3,0	1/1:2,0:13:3.01:59,3,0	1/1:2,0:2:3.01:51,3,0	1/1:2,0:2:2.96:19,3,0	0/1:3,0:3:33.01:33,0,140	0/1:19,0:19:65.63:66,0,1064	0/1:11,0:11:77.81:78,0,329	0/0:8,0:5:8.82:0,9,213	0/1:9,0:9:72.43:72,0,179	0/1:6,0:6:16.01:16,0,130	1/1:2,0:2:3.01:52,3,0	1/1:0,5:5:6.02:282,6,0	./.	0/0:3,0:3:6.02:0,6,306	0/1:6,0:6:29.90:30,0,193	0/1:10,0:10:68.05:68,0,113	0/0:6,0:5:3.01:0,3,90
chr10	81880173	.	T	TA	19624.15	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-13.052;DP=625;FS=4.946;HRun=3;HaplotypeScore=58.0345;InbreedingCoeff=0.9808;MQ=80.93;MQ0=0;MQRankSum=-4.440;QD=40.55;ReadPosRankSum=2.627;VQSLOD=4.7289;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.14:0,57,707	1/1:0,12:12:30.10:450,30,0	0/0:16,0:16:41.96:0,42,474	0/0:15,0:16:33.96:0,34,363	1/1:0,38:38:99:1574,105,0	1/1:1,24:25:66.22:989,66,0	0/0:19,0:19:54.18:0,54,701	1/1:3,29:32:84.23:1194,84,0	1/1:0,14:14:36.12:539,36,0	1/1:1,28:29:84.27:1237,84,0	1/1:1,32:33:93.23:1344,93,0	1/1:1,25:26:72.24:1079,72,0	0/0:27,0:27:78.25:0,78,1013	0/0:24,0:24:69.22:0,69,895	1/1:0,29:29:84.28:1260,84,0	1/1:0,20:20:54.18:810,54,0	1/1:0,16:16:42.14:626,42,0	1/1:0,15:15:45.15:665,45,0	1/1:1,21:22:63.21:939,63,0	1/1:2,30:32:87.29:1297,87,0	1/1:0,11:11:27.09:405,27,0	0/0:20,0:20:60.18:0,60,763	1/1:2,20:22:54.18:809,54,0	1/1:0,14:14:42.14:630,42,0	1/1:0,24:24:63.21:944,63,0	1/1:0,23:23:69.23:1034,69,0	1/1:0,42:42:99:1709,114,0	1/1:0,5:5:6.02:90,6,0
chr10	81880596	.	C	CA	1867.31	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.915;DP=568;FS=8.533;HRun=1;HaplotypeScore=66.0486;InbreedingCoeff=0.8558;MQ=82.57;MQ0=0;MQRankSum=0.597;QD=41.50;ReadPosRankSum=-4.776;VQSLOD=1.5515;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.05:0,75,914	0/0:9,0:9:24.06:0,24,303	0/0:19,0:19:28.78:0,29,577	0/0:16,0:17:45.02:0,45,524	0/0:27,0:27:81.23:0,81,1090	0/0:30,0:30:44.80:0,45,121	0/0:23,0:23:69.20:0,69,925	1/1:0,44:45:99:1962,135,0	0/0:18,0:18:29.52:0,30,78	0/0:24,0:24:72.20:0,72,944	0/0:19,0:19:54.17:0,54,731	0/0:22,0:22:12.09:0,12,65	0/0:17,0:17:51.14:0,51,661	0/0:17,0:17:51.16:0,51,694	0/0:19,0:19:54.17:0,54,724	0/0:17,0:17:48.16:0,48,669	0/0:16,0:16:48.11:0,48,643	0/0:8,0:8:21.02:0,21,253	0/0:20,0:20:60.19:0,60,807	0/0:21,0:21:63.15:0,63,779	0/0:15,0:15:45.13:0,45,594	0/0:13,0:13:39.10:0,39,484	0/0:17,0:17:19.16:0,19,68	0/0:15,0:15:5.10:0,5,53	0/0:25,0:25:75.21:0,75,970	0/0:30,0:30:90.24:0,90,1175	0/0:28,0:28:84.27:0,84,1152	0/0:12,0:12:36.12:0,36,501
chr10	81881745	.	GTATATA	G	8272.59	PASS	AB=1.000;AC=41;AF=0.788;AN=52;BaseQRankSum=3.941;DP=391;FS=0.000;HRun=0;HaplotypeScore=99.6757;InbreedingCoeff=0.6871;MQ=55.77;MQ0=2;MQRankSum=-4.785;QD=24.48;ReadPosRankSum=1.390;VQSLOD=4.0032;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:24:5.44:15,5,0	1/1:0,6:6:9.03:198,9,0	0/0:19,0:12:2.99:0,3,37	0/1:26,0:14:5.61:6,0,51	1/1:3,14:17:17.99:319,18,0	1/1:0,13:13:21.07:462,21,0	1/1:2,0:7:0.47:1,0,0	1/1:25,5:30:57.06:768,57,0	1/1:2,10:12:21:357,21,0	1/1:2,18:20:54.12:1003,54,0	1/1:4,18:21:23.91:430,24,0	1/1:2,13:15:21.07:404,21,0	0/0:13,0:13:30.09:0,30,909	0/0:7,0:7:15.05:0,15,511	1/1:4,9:13:17.99:348,18,0	1/1:2,11:13:21.07:462,21,0	1/1:7,6:12:23.11:416,23,0	0/0:2,0:2:3.01:0,3,31	1/1:7,5:11:12.02:181,12,0	1/1:3,16:19:30.03:582,30,0	./.	0/0:4,0:4:6.02:0,6,204	1/1:3,5:8:6.02:132,6,0	1/1:0,5:5:0.62:1,1,0	1/1:1,14:15:20.93:337,21,0	1/1:5,17:22:50.96:1040,51,0	1/1:2,23:25:39.07:811,39,0	./.
chr10	81881761	.	ATG	A	510.03	PASS	AB=0.988;AC=7;AF=0.130;AN=54;BaseQRankSum=-1.150;DP=374;FS=5.101;HRun=0;HaplotypeScore=104.9326;InbreedingCoeff=0.3613;MQ=55.42;MQ0=2;MQRankSum=-3.379;QD=6.46;ReadPosRankSum=-3.942;VQSLOD=2.0016;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:29.10:0,29,108	0/0:7,0:7:6.01:0,6,32	0/0:22,0:7:2.98:0,3,27	0/1:26,0:10:30.60:34,0,31	0/0:17,0:17:17.95:0,18,112	0/0:14,0:14:11.35:0,11,43	1/1:6,0:6:0.47:1,0,0	1/1:17,9:26:63.44:578,63,0	0/0:11,0:11:16.43:0,16,88	0/0:21,0:21:23.55:0,24,151	0/0:24,0:23:28.68:0,29,186	0/0:14,0:14:14:0,14,71	0/0:9,0:9:27.09:0,27,520	0/0:8,0:8:21.04:0,21,339	0/0:10,0:10:10.73:0,11,54	0/0:12,0:12:9.92:0,10,41	0/1:14,0:13:0.63:1,0,71	./.	0/0:8,0:7:7.21:0,7,47	0/0:17,0:17:16.20:0,16,77	0/0:6,0:6:3:0,3,25	0/0:2,0:2:6.02:0,6,115	0/0:7,0:7:4.75:0,5,26	0/1:6,0:6:0:0,0,0	0/0:15,0:15:16.07:0,16,88	0/0:19,0:19:27.63:0,28,162	0/0:28,0:28:34.80:0,35,174	0/0:4,0:4:8.87:0,9,59
chr10	81881766	.	C	CATAT	1092.18	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=-3.270;DP=384;FS=12.286;HRun=0;HaplotypeScore=113.5660;InbreedingCoeff=0.5050;MQ=52.53;MQ0=2;MQRankSum=-0.589;QD=37.66;ReadPosRankSum=-4.228;VQSLOD=1.9279;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:38.94:0,39,644	0/0:7,0:7:12.04:0,12,209	./.	0/0:24,0:8:0.20:0,0,27	0/0:18,0:18:30.10:0,30,517	0/0:14,0:14:24.08:0,24,418	0/0:8,0:8:5.99:0,6,50	1/1:14,10:29:74.96:1185,75,0	0/0:11,0:11:24.08:0,24,419	0/0:20,0:20:48.15:0,48,812	0/0:25,0:24:53.97:0,54,819	0/0:13,0:13:27.09:0,27,466	0/0:10,0:10:30.09:0,30,485	0/0:8,0:8:21.07:0,21,368	0/0:11,0:11:24.07:0,24,391	0/0:12,0:12:24.08:0,24,415	0/0:15,0:14:30.06:0,30,466	0/0:2,0:2:2.97:0,3,20	0/0:7,0:6:9.02:0,9,133	0/0:20,0:20:39.10:0,39,624	0/0:6,0:6:3.01:0,3,53	0/0:3,0:3:9.01:0,9,129	0/0:8,0:8:9.03:0,9,157	0/0:5,0:5:0:0,0,0	0/0:16,0:16:27.08:0,27,443	0/0:21,0:21:54.06:0,54,823	0/0:28,0:28:54.18:0,54,926	0/0:4,0:4:11.99:0,12,176
chr10	81881914	.	TAAC	T	11393.08	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=7.088;DP=388;FS=1.746;HRun=0;HaplotypeScore=65.9005;InbreedingCoeff=0.9667;MQ=71.68;MQ0=0;MQRankSum=-4.124;QD=35.94;ReadPosRankSum=3.654;VQSLOD=5.2272;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:36.09:0,36,713	1/1:0,11:11:30.10:464,30,0	0/0:10,0:10:22.88:0,23,382	0/0:9,0:9:12.04:0,12,213	1/1:1,18:19:45.11:659,45,0	1/1:4,18:22:45.15:696,45,0	1/1:2,15:17:39.13:603,39,0	1/1:4,18:22:54.17:812,54,0	1/1:3,12:15:27.09:418,27,0	1/1:2,17:19:54.18:836,54,0	1/1:0,15:15:39.13:603,39,0	1/1:3,7:10:18.06:278,18,0	0/0:16,0:16:45.15:0,45,966	0/0:16,0:16:48.16:0,48,1016	1/1:1,11:12:27.09:417,27,0	1/1:0,8:8:21.07:325,21,0	1/1:2,15:17:24.08:371,24,0	1/1:1,9:10:27.09:418,27,0	1/1:1,15:16:45.12:650,45,0	1/1:2,12:14:36.12:548,36,0	1/1:1,13:13:30.10:464,30,0	0/0:7,0:7:21.07:0,21,451	1/1:0,10:10:30.10:464,30,0	1/1:0,10:10:21.07:325,21,0	1/1:1,13:14:30.10:464,30,0	1/1:0,14:14:42.14:650,42,0	1/1:2,21:23:54.18:835,54,0	1/1:0,5:5:6.02:93,6,0
chr10	81882159	.	C	CT	622.27	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.274;DP=608;FS=1.937;HRun=6;HaplotypeScore=69.3185;InbreedingCoeff=0.9804;MQ=74.82;MQ0=0;MQRankSum=-2.134;QD=24.89;ReadPosRankSum=-0.968;VQSLOD=3.3127;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.19:0,87,888	0/0:19,0:19:45.10:0,45,459	0/0:15,0:15:42.06:0,42,413	0/0:17,0:17:45.08:0,45,451	0/0:26,0:26:72.14:0,72,725	0/0:15,0:15:42.07:0,42,414	1/1:4,21:25:57.18:717,57,0	0/0:32,0:32:69.11:0,69,692	0/0:19,0:19:54.11:0,54,544	0/0:33,0:33:96.21:0,96,977	0/0:25,0:25:63.13:0,63,639	0/0:17,0:17:48.11:0,48,490	0/0:25,0:25:66.14:0,66,673	0/0:23,0:23:63.14:0,63,643	0/0:24,0:24:69.15:0,69,704	0/0:22,0:22:49.71:0,50,543	0/0:25,0:25:66.10:0,66,673	0/0:11,0:11:21.05:0,21,214	0/0:25,0:25:69.15:0,69,698	0/0:25,0:25:66.15:0,66,673	0/0:21,0:21:60.14:0,60,612	0/0:19,0:19:48.10:0,48,490	0/0:14,0:14:39.09:0,39,398	0/0:23,0:23:60.13:0,60,612	0/0:17,0:17:51.12:0,51,520	0/0:23,0:23:66.14:0,66,668	0/0:30,0:29:72.15:0,72,734	0/0:5,0:5:15.03:0,15,153
chr10	81882421	.	TG	T	1115.74	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.814;DP=657;FS=0.000;HRun=2;HaplotypeScore=80.8644;InbreedingCoeff=0.9763;MQ=91.80;MQ0=0;MQRankSum=-2.902;QD=31.88;ReadPosRankSum=-4.951;VQSLOD=1.8124;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.20:0,60,896	0/0:15,0:15:42.14:0,42,629	0/0:26,0:26:78.26:0,78,1123	0/0:28,0:28:81.22:0,81,1128	0/0:32,0:32:96.33:0,96,1433	0/0:35,0:35:99:0,102,1528	0/0:10,0:10:30.08:0,30,426	1/1:1,34:35:99:1211,99,0	0/0:15,0:15:45.14:0,45,652	0/0:31,0:31:87.23:0,87,1226	0/0:31,0:31:93.29:0,93,1354	0/0:20,0:20:57.19:0,57,854	0/0:22,0:22:66.21:0,66,965	0/0:27,0:27:81.22:0,81,1166	0/0:16,0:16:48.16:0,48,718	0/0:24,0:24:72.24:0,72,1057	0/0:28,0:28:84.25:0,84,1200	0/0:6,0:6:18.06:0,18,256	0/0:24,0:24:72.24:0,72,1077	0/0:34,0:34:99:0,102,1507	0/0:16,0:16:45.14:0,45,654	0/0:28,0:28:81.24:0,81,1172	0/0:30,0:30:90.29:0,90,1316	0/0:27,0:27:81.27:0,81,1206	0/0:31,0:31:93.30:0,93,1371	0/0:19,0:19:54.17:0,54,777	0/0:22,0:22:60.19:0,60,874	0/0:5,0:5:15.05:0,15,225
chr10	81882795	.	T	TA	4392.44	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-12.694;DP=621;FS=8.229;HRun=7;HaplotypeScore=68.8655;InbreedingCoeff=0.9961;MQ=79.97;MQ0=0;MQRankSum=-2.043;QD=30.72;ReadPosRankSum=-1.762;VQSLOD=4.3761;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.09:0,60,579	0/0:9,0:9:24.03:0,24,232	0/0:18,0:18:33.03:0,33,312	0/0:11,0:11:18:0,18,165	0/0:25,0:25:66.10:0,66,637	1/1:0,19:19:54.17:652,54,0	0/0:16,0:16:48.08:0,48,463	1/1:5,33:38:99:1183,99,0	1/1:4,20:24:54.17:652,54,0	0/0:28,0:28:81.13:0,81,782	0/0:26,0:26:75.11:0,75,719	1/1:2,18:20:51.11:600,51,0	0/0:30,0:30:84.13:0,84,811	0/0:23,0:23:66.10:0,66,637	0/0:20,0:20:60.08:0,60,574	0/0:32,0:32:90.13:0,90,864	0/0:33,0:33:96.15:0,96,927	0/0:8,0:8:17.92:0,18,174	0/0:21,0:21:53.33:0,53,513	0/0:26,0:26:69.11:0,69,666	0/0:18,0:18:51.08:0,51,492	0/0:22,0:22:60.08:0,60,576	1/1:2,17:19:48.15:580,48,0	1/1:1,22:23:60.18:725,60,0	0/0:20,0:20:42.05:0,42,406	0/0:27,0:27:81.11:0,81,774	0/0:33,0:32:87.13:0,87,840	0/0:10,0:10:30.03:0,30,283
chr10	81886691	.	ATC	A	551.63	PASS	AC=28;AF=0.583;AN=48;BaseQRankSum=6.364;DP=168;FS=0.000;HRun=0;HaplotypeScore=35.5135;InbreedingCoeff=0.6056;MQ=34.22;MQ0=79;MQRankSum=-1.630;QD=7.77;ReadPosRankSum=1.669;VQSLOD=2.3359;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:8:24.07:0,24,277	1/1:2,1:1:3:27,3,0	0/0:19,0:1:3:0,3,29	./.	1/1:3,5:3:9:82,9,0	0/0:4,0:1:3.01:0,3,36	0/0:4,0:2:6.02:0,6,72	0/0:11,0:9:23.53:0,24,275	./.	1/1:4,3:2:6.01:56,6,0	1/1:6,6:4:9:80,9,0	0/0:5,0:2:6.02:0,6,72	0/0:6,0:5:15.04:0,15,173	0/0:7,0:5:15.05:0,15,183	1/1:3,1:1:3:27,3,0	1/1:2,2:2:6:54,6,0	./.	1/1:0,1:1:3.01:32,3,0	1/1:1,3:1:3:29,3,0	1/1:2,3:3:9:82,9,0	1/1:6,1:1:3:27,3,0	0/0:3,0:1:3.01:0,3,36	0/0:9,0:6:18.05:0,18,215	./.	1/1:0,2:2:6:54,6,0	1/1:2,5:5:6.01:56,6,0	1/1:2,3:2:6:55,6,0	1/1:0,2:2:6.01:57,6,0
chr10	81886695	.	CTCGAAAT	C	1486.31	PASS	AC=28;AF=0.560;AN=50;BaseQRankSum=6.600;DP=164;FS=0.000;HRun=0;HaplotypeScore=38.8195;InbreedingCoeff=0.6143;MQ=34.87;MQ0=70;MQRankSum=-0.386;QD=21.54;ReadPosRankSum=2.244;VQSLOD=2.2971;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:8:24.08:0,24,962	1/1:2,1:1:3.01:62,3,0	0/0:16,0:1:3.01:0,3,62	./.	1/1:2,5:3:9.03:186,9,0	0/0:4,0:1:3.01:0,3,125	0/0:4,0:2:6.02:0,6,251	0/0:11,0:8:24.08:0,24,835	0/0:3,0:2:5.95:0,6,56	1/1:4,3:2:6.02:126,6,0	1/1:6,6:4:12.04:220,12,0	0/0:5,0:2:6.02:0,6,251	0/0:7,0:6:18.06:0,18,663	0/0:7,0:6:18.06:0,18,716	1/1:3,1:1:3.01:62,3,0	1/1:2,2:2:6.02:124,6,0	./.	1/1:0,1:1:3.01:66,3,0	1/1:1,3:1:3.01:64,3,0	1/1:0,3:3:9.03:186,9,0	1/1:5,1:1:3.01:62,3,0	0/0:2,0:1:3.01:0,3,82	0/0:8,0:6:18.06:0,18,751	./.	1/1:0,2:2:6.02:123,6,0	1/1:2,5:5:6.02:126,6,0	1/1:4,3:2:6.02:124,6,0	1/1:0,2:2:6.02:126,6,0
chr10	81886727	.	T	TA	2120.60	PASS	AB=0.889;AC=45;AF=0.865;AN=52;BaseQRankSum=-0.691;DP=194;FS=29.762;HRun=11;HaplotypeScore=52.5184;InbreedingCoeff=0.3429;MQ=44.26;MQ0=17;MQRankSum=-2.597;QD=12.55;ReadPosRankSum=1.466;VQSLOD=1.2466;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:23.52:0,24,165	1/1:2,3:5:15:143,15,0	0/0:7,0:2:2.97:0,3,21	0/1:8,0:3:4.25:6,0,4	1/1:6,13:18:21.69:385,22,0	1/1:3,0:4:8.67:51,9,0	1/1:2,0:2:2.97:20,3,0	1/1:8,0:8:2.84:15,3,0	1/1:3,0:3:5.77:31,6,0	1/1:4,4:5:12.02:121,12,0	1/1:8,10:14:30.06:304,30,0	1/1:1,0:3:5.68:28,6,0	1/1:1,5:6:15.03:152,15,0	1/1:1,7:7:15.03:152,15,0	0/1:2,2:3:17.17:24,0,17	1/1:1,4:3:9.02:91,9,0	0/1:6,0:4:0:0,0,0	1/1:4,0:3:2.98:30,3,0	./.	1/1:2,7:8:20.99:202,21,0	1/1:5,0:4:5.98:47,6,0	1/1:0,1:1:3.01:30,3,0	1/1:6,0:8:11.40:58,11,0	./.	1/1:3,3:5:8.98:80,9,0	1/1:2,5:7:9.01:85,9,0	1/1:5,2:4:8.99:83,9,0	1/1:2,3:6:11.86:106,12,0
chr10	81886743	.	GA	G	2279.71	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-1.515;DP=221;FS=3.798;HRun=11;HaplotypeScore=49.5440;InbreedingCoeff=0.7168;MQ=53.32;MQ0=10;MQRankSum=-2.614;QD=13.10;ReadPosRankSum=2.202;VQSLOD=3.5060;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,12:14:29.77:245,30,0	1/1:1,4:5:14.98:123,15,0	0/0:13,0:4:10.67:0,11,79	0/0:13,0:7:13.22:0,13,112	1/1:5,16:20:26.88:221,27,0	1/1:1,4:4:8.99:74,9,0	0/0:1,0:2:5.81:0,6,34	1/1:6,11:15:29.92:241,30,0	1/1:1,4:4:11.99:98,12,0	1/1:2,7:7:20.98:172,21,0	1/1:4,12:16:29.92:246,30,0	1/1:3,1:4:2.98:25,3,0	0/0:6,0:6:17.96:0,18,167	0/0:10,0:9:21.40:0,21,188	1/1:2,3:4:8.99:74,9,0	1/1:1,3:3:5.99:49,6,0	1/1:2,4:5:8.88:74,9,0	1/1:3,1:3:2.90:25,3,0	1/1:2,4:4:7.80:54,8,0	1/1:3,8:10:20.95:172,21,0	1/1:0,5:5:11.97:98,12,0	0/0:2,0:2:6.02:0,6,64	1/1:0,5:5:11.97:97,12,0	1/1:0,2:2:3:25,3,0	1/1:1,4:4:5.98:49,6,0	1/1:3,5:8:11.98:98,12,0	1/1:3,6:6:17.95:143,18,0	1/1:4,2:6:5.98:49,6,0
chr10	81886823	.	A	AAAAAAGATTAAATC	26461.45	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-3.281;DP=316;FS=123.185;HRun=0;HaplotypeScore=104.3953;InbreedingCoeff=0.8613;MQ=72.54;MQ0=21;MQRankSum=-9.126;QD=109.34;ReadPosRankSum=-1.754;VQSLOD=1.8141;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:15:42.14:0,42,1668	1/1:4,0:3:6.02:254,6,0	0/0:14,0:13:38.49:0,38,1176	0/1:18,0:16:1.25:1,0,621	1/1:9,3:11:30.10:1443,30,0	1/1:2,4:7:15.05:882,15,0	1/1:6,1:9:18.06:899,18,0	1/1:7,0:7:15.05:532,15,0	1/1:9,3:10:30.10:1516,30,0	1/1:11,1:7:18.06:989,18,0	1/1:8,9:17:42.13:2539,42,0	1/1:6,3:8:24.08:1503,24,0	0/0:19,0:19:56:0,56,2168	0/0:13,0:13:33.11:0,33,1224	1/1:5,5:11:21.07:1265,21,0	1/1:2,5:8:21.07:1443,21,0	1/1:10,1:9:24.08:1273,24,0	1/1:4,1:4:9.03:566,9,0	1/1:6,3:8:21.03:981,21,0	1/1:9,3:12:27.09:1480,27,0	1/1:8,1:7:6.02:244,6,0	0/0:10,0:7:18.05:0,18,639	1/1:7,4:11:26.93:1647,27,0	1/1:6,4:9:15.05:832,15,0	1/1:10,5:14:39.12:1995,39,0	1/1:9,5:14:36.12:2019,36,0	1/1:8,3:9:27.08:1408,27,0	1/1:2,3:5:12.04:750,12,0
chr10	81886925	.	C	CA	2565	PASS	AB=0.733;AC=29;AF=0.537;AN=54;BaseQRankSum=-1.628;DP=403;FS=1.589;HRun=12;HaplotypeScore=49.1763;InbreedingCoeff=0.4369;MQ=55.17;MQ0=17;MQRankSum=-0.821;QD=10.10;ReadPosRankSum=-1.128;VQSLOD=2.2582;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,4:30:23.05:133,23,0	1/1:0,0:1:2.84:14,3,0	0/1:16,0:10:13.37:13,0,64	0/0:19,0:12:10.78:0,11,91	1/1:5,9:13:24.03:229,24,0	0/0:16,0:15:5.82:0,6,194	0/0:20,0:19:47.70:0,48,348	./.	0/0:12,1:13:25.22:0,25,211	0/1:4,11:15:7.77:240,0,8	1/1:2,3:5:11.85:100,12,0	0/0:17,0:15:26.82:0,27,195	0/0:14,0:13:17.84:0,18,203	0/0:14,0:13:29.76:0,30,218	1/1:3,9:12:27.04:262,27,0	0/1:9,11:20:15.41:264,0,15	0/1:8,10:16:10.79:252,0,11	0/1:7,6:11:1.02:139,0,1	1/1:9,12:20:13.98:278,14,0	1/1:3,8:11:21.03:204,21,0	1/1:6,4:10:4.71:88,5,0	0/1:11,1:11:6.04:6,0,129	0/0:5,0:5:11.92:0,12,87	0/0:26,0:25:43.70:0,44,305	1/1:9,2:9:9:83,9,0	0/1:8,7:15:19.78:151,0,20	1/1:6,14:18:29.08:269,29,0	1/1:1,1:2:3:29,3,0
chr10	81887242	.	C	CT	2784.75	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-8.847;DP=572;FS=2.828;HRun=2;HaplotypeScore=57.3258;InbreedingCoeff=0.9499;MQ=86.97;MQ0=0;MQRankSum=-0.496;QD=33.55;ReadPosRankSum=1.263;VQSLOD=3.7010;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.19:0,78,948	0/0:7,0:7:21.07:0,21,260	0/0:21,0:21:57.18:0,57,706	0/0:23,0:23:69.20:0,69,837	0/0:24,0:24:66.19:0,66,802	1/1:1,13:14:33.11:475,33,0	0/0:15,0:15:45.13:0,45,544	0/0:26,0:26:69.13:0,69,812	1/1:3,13:16:1.95:480,2,0	0/0:32,0:32:90.27:0,90,1105	0/0:23,0:23:63.20:0,63,780	1/1:0,22:22:63.21:907,63,0	0/0:15,0:15:42.09:0,42,491	0/0:25,0:25:75.23:0,75,925	0/0:28,0:28:78.24:0,78,956	0/0:20,0:20:54.17:0,54,669	0/0:18,0:18:54.17:0,54,669	0/0:10,0:10:30.07:0,30,356	0/0:18,0:18:48.12:0,48,580	0/0:27,0:27:75.21:0,75,904	0/0:23,0:23:60.16:0,60,717	0/0:15,0:15:45.14:0,45,557	1/1:0,16:16:39.13:555,39,0	1/1:0,15:15:39.05:535,39,0	0/0:24,0:24:66.15:0,66,799	0/0:29,0:29:81.25:0,81,993	0/0:23,0:22:69.20:0,69,842	0/0:14,0:14:42.13:0,42,519
chr10	81887317	.	C	CTGTG	1185.58	PASS	AB=1.000;AC=31;AF=0.574;AN=54;BaseQRankSum=-7.156;DP=602;FS=12.348;HRun=0;HaplotypeScore=150.0460;InbreedingCoeff=0.4058;MQ=53.11;MQ0=10;MQRankSum=4.307;QD=2.90;ReadPosRankSum=-3.444;VQSLOD=1.1126;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:9.25:81,9,0	0/0:5,0:5:3:0,3,26	./.	0/1:32,0:10:0:0,0,0	0/0:22,0:21:11.99:0,12,100	1/1:24,0:23:5.98:48,6,0	1/1:8,12:25:17.21:315,17,0	1/1:31,0:30:23.50:127,23,0	1/1:24,0:22:8.17:132,8,0	0/1:29,0:28:37.07:48,0,37	1/1:15,0:15:1.49:5,1,0	1/1:17,0:17:7.24:68,7,0	1/1:16,0:16:4.07:13,4,0	1/1:20,0:20:5.43:111,5,0	0/0:29,0:29:14.42:0,14,149	0/0:23,0:23:13.43:0,13,127	0/0:23,0:23:5.86:0,6,50	0/0:12,0:12:4.08:0,4,49	0/1:9,0:9:17.26:34,0,17	0/0:28,0:27:6:0,6,52	1/1:34,0:34:11.86:88,12,0	1/1:18,0:18:6.47:52,6,0	1/1:17,0:17:7.54:52,8,0	1/1:17,0:16:6.46:49,6,0	0/1:24,0:24:29.77:30,0,89	0/1:24,0:24:34.60:108,0,35	0/0:19,0:19:9.90:0,10,81	0/0:11,0:11:3.47:0,3,27
chr10	81887341	.	GTGTGTGTC	G	2610.31	PASS	AB=0.989;AC=33;AF=0.589;AN=56;BaseQRankSum=2.218;DP=658;FS=0.000;HRun=0;HaplotypeScore=170.6743;InbreedingCoeff=0.4816;MQ=55.34;MQ0=22;MQRankSum=-1.153;QD=7.11;ReadPosRankSum=1.544;VQSLOD=1.9821;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:27.11:0,27,1016	1/1:7,0:7:3.46:25,3,0	0/0:47,0:11:8.64:0,9,149	0/0:72,0:20:19.53:0,20,240	0/1:17,1:17:43.88:57,0,44	0/1:24,0:23:35.38:35,0,179	0/0:24,0:24:20.22:0,20,769	0/0:31,0:29:22.81:0,23,552	0/1:23,0:21:40.37:40,0,358	1/1:8,17:24:27.76:567,28,0	1/1:13,0:13:3.15:12,3,0	0/1:15,0:15:59.68:60,0,153	0/0:14,0:14:23.57:0,24,375	0/0:21,0:20:3.93:0,4,431	1/1:26,1:27:23.46:231,23,0	1/1:19,2:21:20.97:280,21,0	1/1:26,0:26:3.59:25,4,0	1/1:12,0:12:6.87:50,7,0	1/1:1,7:8:20.95:226,21,0	1/1:23,0:22:5.98:47,6,0	1/1:29,1:29:25.94:180,26,0	0/0:17,0:17:27.02:0,27,635	0/1:15,0:15:35.45:35,0,77	0/0:26,0:25:36.75:0,37,445	1/1:24,0:24:20.64:371,21,0	1/1:25,0:25:42.05:378,42,0	1/1:22,0:22:15.68:106,16,0	1/1:2,7:9:3.01:82,3,0
chr10	81887343	.	GTGTGTC	G	4661.28	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-0.637;DP=659;FS=0.000;HRun=0;HaplotypeScore=152.5967;InbreedingCoeff=0.4882;MQ=56.39;MQ0=22;MQRankSum=-1.323;QD=11.80;ReadPosRankSum=2.197;VQSLOD=3.4710;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:6.14:0,6,833	1/1:0,7:7:3.48:70,3,0	0/0:46,0:12:11.24:0,11,171	0/0:76,0:21:22.54:0,23,287	1/1:20,0:19:13.92:84,14,0	0/1:24,0:23:35.41:35,0,114	0/0:24,0:25:23.22:0,23,628	0/1:30,0:28:10.89:11,0,452	0/1:22,0:20:77.77:78,0,247	1/1:22,2:23:59.31:597,59,0	1/1:4,10:14:6.39:43,6,0	0/1:18,0:18:50.69:51,0,196	0/0:15,0:15:23.49:0,23,253	0/0:21,0:20:3.56:0,4,372	1/1:4,22:26:24.08:513,24,0	1/1:4,15:19:20.85:439,21,0	1/1:3,23:26:9.01:128,9,0	1/1:2,10:12:8.24:145,8,0	1/1:8,0:8:20.97:225,21,0	1/1:2,19:20:6.02:137,6,0	1/1:29,0:28:26.86:264,27,0	0/0:16,0:16:26.97:0,27,504	0/1:16,0:16:35.47:35,0,36	0/0:27,0:26:15.82:0,16,365	1/1:18,7:25:64.91:833,65,0	1/1:4,20:24:50.17:588,50,0	1/1:2,20:22:16.66:332,17,0	1/1:8,0:8:4.83:53,5,0
chr10	81887345	.	GTGTC	G	3440.25	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=2.420;DP=654;FS=0.429;HRun=0;HaplotypeScore=143.5897;InbreedingCoeff=0.3732;MQ=58.35;MQ0=23;MQRankSum=-2.840;QD=8.04;ReadPosRankSum=1.963;VQSLOD=2.9607;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:39:15.81:16,0,630	1/1:7,0:7:3.48:36,3,0	0/0:48,0:13:14.18:0,14,157	0/0:74,0:23:21.60:0,22,264	1/1:3,17:19:15.04:251,15,0	0/1:21,0:20:39:39,0,86	0/0:26,0:26:26.20:0,26,501	0/1:29,0:27:41.09:41,0,356	0/1:22,0:20:74.82:75,0,190	1/1:23,0:22:55.71:468,56,0	1/1:14,0:14:5.92:42,6,0	0/1:19,0:19:47.71:48,0,185	0/0:15,0:15:8.33:0,8,170	0/0:20,0:19:4.02:0,4,274	1/1:24,0:24:24.04:269,24,0	1/1:18,0:18:21.06:246,21,0	1/1:25,1:26:8.98:111,9,0	1/1:12,0:12:7.57:76,8,0	1/1:8,0:8:20.95:181,21,0	1/1:21,0:20:6.02:71,6,0	1/1:29,0:28:32.78:264,33,0	0/0:16,0:16:2.07:0,2,314	0/1:17,0:17:33.01:33,0,53	0/0:27,0:26:15.18:0,15,255	1/1:25,0:25:62.39:532,62,0	1/1:24,0:24:51.40:434,51,0	1/1:22,0:22:16.78:167,17,0	1/1:8,0:8:4.83:40,5,0
chr10	81887347	.	GTC	G	2641.62	PASS	AB=0.973;AC=38;AF=0.679;AN=56;BaseQRankSum=3.251;DP=647;FS=2.549;HRun=0;HaplotypeScore=134.4818;InbreedingCoeff=0.2495;MQ=61.15;MQ0=22;MQRankSum=-3.810;QD=5.82;ReadPosRankSum=2.051;VQSLOD=3.5038;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:42:7.21:7,0,531	1/1:7,0:7:3.45:22,3,0	0/0:51,0:17:16.15:0,16,198	0/0:70,0:23:21.48:0,21,263	1/1:19,0:18:14.91:113,15,0	0/1:21,0:20:65.13:84,0,65	0/0:25,0:25:24.06:0,24,330	0/1:21,8:27:46.36:46,0,373	0/1:22,0:20:75.61:76,0,127	1/1:23,0:22:53.36:399,53,0	1/1:14,0:14:5.92:42,6,0	0/1:19,0:19:47.71:48,0,185	0/1:15,0:15:28.64:29,0,99	0/0:19,0:18:3.94:0,4,202	1/1:24,0:24:23.79:168,24,0	1/1:17,0:17:20.84:149,21,0	1/1:26,0:26:8.93:64,9,0	1/1:10,0:10:5.97:44,6,0	1/1:8,0:8:20.90:163,21,0	1/1:20,0:20:5.97:43,6,0	1/1:27,0:26:35.41:284,35,0	0/1:17,0:17:7.77:8,0,207	0/1:17,0:17:35.23:58,0,35	0/0:27,0:26:8.79:0,9,236	1/1:25,0:25:57.56:451,58,0	1/1:23,0:23:51.63:389,52,0	1/1:21,0:21:16.24:108,16,0	1/1:8,0:8:5.19:27,5,0
chr10	81889856	.	A	AAAAATGACCCTAGGAGCTA	2330.22	PASS	AB=0.708;AC=32;AF=0.941;AN=34;BaseQRankSum=0.630;DP=54;FS=6.232;HRun=0;HaplotypeScore=28.1581;InbreedingCoeff=-0.1982;MQ=110.04;MQ0=0;MQRankSum=-2.461;QD=50.66;ReadPosRankSum=-1.889;VQSLOD=1.1156;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:5.98:90,6,0	./.	0/1:4,1:6:28.44:601,0,28	0/1:3,0:5:18.34:486,0,18	1/1:4,0:4:8.96:70,9,0	1/1:2,0:2:3.01:58,3,0	./.	1/1:2,0:2:3.01:55,3,0	1/1:2,0:2:6.02:131,6,0	1/1:3,0:3:6.01:112,6,0	./.	./.	./.	1/1:1,0:1:3.01:78,3,0	1/1:2,0:2:5.98:79,6,0	1/1:3,0:3:3:25,3,0	1/1:1,0:1:3.01:207,3,0	./.	1/1:1,0:1:3:25,3,0	1/1:1,0:1:3.01:44,3,0	1/1:3,0:3:9.01:143,9,0	1/1:3,0:3:8.95:93,9,0	1/1:2,0:2:6.02:124,6,0	./.	./.	./.	./.	./.
chr10	81891995	.	TACACACACAC	T	3442.22	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.654;DP=522;FS=25.379;HRun=0;HaplotypeScore=167.5010;InbreedingCoeff=0.7785;MQ=57.64;MQ0=8;MQRankSum=-6.967;QD=52.15;ReadPosRankSum=4.943;VQSLOD=1.9080;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:11.79:0,12,267	0/0:4,0:4:3.01:0,3,124	0/0:24,0:15:9.03:0,9,326	0/0:20,0:13:12.04:0,12,239	0/0:21,0:21:24.55:0,25,936	0/0:21,0:21:9.01:0,9,282	0/0:9,0:20:33.11:0,33,1305	0/0:24,0:24:39.01:0,39,1090	0/0:19,0:19:16.61:0,17,612	0/0:11,0:18:27.08:0,27,956	0/0:2,0:9:20.64:0,21,352	0/0:13,0:12:6.02:0,6,258	1/1:14,14:29:45.63:1309,46,0	1/1:7,17:24:48.06:1450,48,0	0/0:12,0:23:21.05:0,21,749	0/0:12,0:29:30.07:0,30,1047	0/0:12,0:12:17.85:0,18,712	0/0:12,0:17:18.06:0,18,665	0/0:11,0:11:27.09:0,27,1066	0/0:4,0:12:23.08:0,23,574	0/0:27,0:27:32.82:0,33,1494	1/1:3,8:13:24.08:683,24,0	0/0:11,0:11:12.04:0,12,415	0/0:23,0:21:6.02:0,6,260	0/0:4,0:14:8.96:0,9,243	0/0:9,0:21:45.15:0,45,1626	0/0:9,0:15:15.03:0,15,532	0/0:5,0:13:12.04:0,12,451
chr10	81892029	.	C	CACACACA	4354.81	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=3.939;DP=536;FS=59.013;HRun=0;HaplotypeScore=152.1658;InbreedingCoeff=-0.2053;MQ=49.89;MQ0=23;MQRankSum=-7.582;QD=10.78;ReadPosRankSum=-2.418;VQSLOD=1.8198;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:23:53.63:54,0,221	0/0:1,0:1:3.01:0,3,38	0/0:28,0:17:48.02:0,48,554	0/0:28,0:15:42.12:0,42,531	0/1:24,0:24:99:139,0,360	1/1:6,13:20:8.89:339,9,0	0/0:21,0:21:39.14:0,39,414	0/1:26,0:26:69.86:70,0,587	1/1:1,11:14:18.02:540,18,0	0/1:26,0:26:99:262,0,397	0/1:19,0:19:22.06:22,0,367	1/1:3,7:10:6.02:245,6,0	0/0:17,0:17:45.15:0,45,894	0/0:23,0:23:60.18:0,60,1032	0/1:18,0:18:90.83:334,0,91	0/1:21,0:21:87.80:372,0,88	0/1:19,0:19:99:194,0,342	0/1:12,0:12:99:143,0,186	0/1:19,0:18:80.10:80,0,341	0/1:16,0:16:99:120,0,261	0/1:21,0:20:76.38:135,0,76	0/0:14,0:14:33.11:0,33,585	1/1:2,0:8:11.86:200,12,0	1/1:8,0:17:12.04:302,12,0	0/1:19,0:19:54.01:54,0,209	0/1:24,0:23:99:203,0,489	0/1:17,0:17:99:208,0,202	0/1:17,0:17:99:338,0,197
chr10	81892594	.	TG	T	14545.87	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=15.425;DP=701;FS=4.502;HRun=1;HaplotypeScore=67.3075;InbreedingCoeff=0.9999;MQ=92.01;MQ0=0;MQRankSum=-2.331;QD=39.31;ReadPosRankSum=1.039;VQSLOD=5.5565;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,2129	1/1:0,12:12:30.10:420,30,0	0/0:27,0:27:81.25:0,81,1264	0/0:30,0:30:77.83:0,78,1189	1/1:0,32:32:93.27:1278,93,0	0/0:21,0:21:63.20:0,63,981	0/0:29,0:29:87.30:0,87,1391	1/1:0,32:32:96.30:1310,96,0	0/0:27,0:27:81.26:0,81,1271	1/1:0,24:24:69.22:948,69,0	1/1:0,18:18:51.17:713,51,0	0/0:17,0:17:51.16:0,51,778	0/0:36,0:36:99:0,108,1721	0/0:24,0:24:69.22:0,69,1076	1/1:0,21:21:60.20:839,60,0	1/1:0,23:23:63.21:881,63,0	1/1:0,15:15:42.14:587,42,0	1/1:0,11:11:33.11:461,33,0	1/1:0,26:26:78.20:1023,78,0	1/1:0,31:31:90.27:1237,90,0	1/1:1,43:44:99:1576,114,0	0/0:21,0:21:63.20:0,63,981	0/0:23,0:23:69.24:0,69,1099	0/0:30,0:30:90.31:0,90,1435	1/1:0,20:20:60.20:839,60,0	1/1:0,22:22:66.22:922,66,0	1/1:0,24:24:63.21:881,63,0	1/1:0,15:15:45.15:629,45,0
chr10	81892776	.	CT	C	664.76	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.908;DP=524;FS=0.000;HRun=6;HaplotypeScore=64.0591;InbreedingCoeff=0.9945;MQ=75.77;MQ0=0;MQRankSum=-2.309;QD=23.74;ReadPosRankSum=-3.746;VQSLOD=1.6274;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:78.25:0,78,1023	0/0:12,0:12:36.12:0,36,474	0/0:18,0:17:36.01:0,36,429	0/0:11,0:10:24.54:0,25,290	0/0:19,0:19:51.17:0,51,671	0/0:19,0:19:54.17:0,54,696	0/0:11,0:11:30.10:0,30,394	1/1:6,22:28:72.16:760,72,0	0/0:11,0:11:30.09:0,30,382	0/0:19,0:19:48.15:0,48,621	0/0:25,0:25:63.20:0,63,815	0/0:12,0:12:33.11:0,33,434	0/0:28,0:28:72.23:0,72,946	0/0:27,0:27:72.22:0,72,930	0/0:20,0:20:60.20:0,60,790	0/0:12,0:12:36.10:0,36,446	0/0:17,0:17:48.16:0,48,631	0/0:10,0:10:30.10:0,30,395	0/0:11,0:11:30.08:0,30,368	0/0:26,0:26:78.23:0,78,996	0/0:25,0:25:69.21:0,69,893	0/0:17,0:17:45.13:0,45,576	0/0:19,0:19:57.18:0,57,736	0/0:19,0:19:51.14:0,51,642	0/0:27,0:27:66.16:0,66,835	0/0:26,0:26:72.22:0,72,922	0/0:18,0:18:51.14:0,51,653	0/0:10,0:10:27.09:0,27,354
chr10	81892787	.	G	GC	2383.97	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-6.644;DP=510;FS=12.722;HRun=8;HaplotypeScore=57.7638;InbreedingCoeff=0.8851;MQ=73.65;MQ0=0;MQRankSum=0.825;QD=20.91;ReadPosRankSum=0.998;VQSLOD=2.8107;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:77.88:0,78,680	0/0:16,0:16:45.02:0,45,412	0/0:18,0:17:29.37:0,29,232	0/1:8,0:9:20.34:20,0,52	0/0:20,0:20:53.90:0,54,474	0/0:17,0:17:51.03:0,51,467	1/1:0,9:9:27.08:312,27,0	1/1:17,12:29:39.10:432,39,0	0/0:9,0:9:27.01:0,27,247	0/0:18,0:18:39:0,39,357	0/0:23,0:23:63.03:0,63,576	0/0:11,0:11:30:0,30,270	1/1:3,20:23:57.17:657,57,0	1/1:5,21:26:60.18:692,60,0	0/0:21,0:21:54.01:0,54,490	0/0:11,0:11:30.02:0,30,275	0/0:21,0:21:59.86:0,60,516	0/0:10,0:10:27.01:0,27,247	0/0:8,0:8:21.01:0,21,192	0/0:28,0:28:63.01:0,63,576	0/0:21,0:21:57.02:0,57,522	1/1:2,15:17:39.12:449,39,0	0/0:23,0:23:53.03:0,53,514	0/0:16,0:16:45:0,45,403	0/0:24,0:24:56.99:0,57,516	0/0:22,0:22:60.02:0,60,546	0/0:19,0:19:45.02:0,45,412	0/0:11,0:11:20.99:0,21,192
chr10	81892899	.	A	AT	615.29	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.171;DP=565;FS=3.196;HRun=5;HaplotypeScore=65.6130;InbreedingCoeff=0.9886;MQ=76.38;MQ0=0;MQRankSum=0.091;QD=29.30;ReadPosRankSum=-2.936;VQSLOD=2.9850;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.21:0,84,903	0/0:10,0:10:27.07:0,27,290	0/0:12,0:12:23.60:0,24,256	0/0:15,0:15:32.48:0,32,303	0/0:27,0:27:81.20:0,81,871	0/0:19,0:19:51.13:0,51,548	0/0:13,0:13:39.10:0,39,419	1/1:3,18:21:54.18:710,54,0	0/0:15,0:15:45.07:0,45,471	0/0:30,0:30:69.16:0,69,741	0/0:29,0:29:78.16:0,78,821	0/0:11,0:11:27.07:0,27,290	0/0:33,0:33:93.22:0,93,991	0/0:17,0:17:48.08:0,48,498	0/0:20,0:20:57.13:0,57,603	0/0:21,0:21:57.14:0,57,613	0/0:23,0:23:63.16:0,63,676	0/0:9,0:9:24.06:0,24,257	0/0:12,0:12:33.05:0,33,332	0/0:43,0:43:99:0,123,1297	0/0:11,0:11:33.08:0,33,355	0/0:19,0:19:48.10:0,48,508	0/0:14,0:14:33.06:0,33,346	0/0:12,0:12:24.06:0,24,257	0/0:31,0:31:90.23:0,90,967	0/0:31,0:31:81.19:0,81,864	0/0:29,0:27:81.18:0,81,861	0/0:8,0:8:24.06:0,24,258
chr10	81893439	.	GTT	G	4889.68	PASS	AB=0.843;AC=33;AF=0.589;AN=56;BaseQRankSum=-1.433;DP=459;FS=7.600;HRun=9;HaplotypeScore=195.0361;InbreedingCoeff=0.1579;MQ=56.45;MQ0=6;MQRankSum=-0.618;QD=13.14;ReadPosRankSum=9.712;VQSLOD=0.1754;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:21:2.97:36,0,3	0/1:3,0:3:4.61:17,0,5	0/0:29,0:16:29.11:0,29,248	0/0:29,0:10:17.85:0,18,215	0/1:23,5:28:8.50:466,0,8	0/1:11,6:16:99:112,0,102	0/0:3,0:3:5.92:0,6,42	0/1:16,15:27:69.72:352,0,70	0/1:8,2:10:34.28:121,0,34	0/1:27,6:32:43.20:389,0,43	1/1:17,4:21:7.98:284,8,0	0/1:7,3:10:82.46:82,0,91	0/0:9,0:9:19.20:0,19,168	0/0:7,0:8:21.03:0,21,253	1/1:12,3:15:15.45:262,15,0	1/1:11,1:12:21.49:156,21,0	0/1:7,1:9:21.35:112,0,21	1/1:9,0:9:9.99:104,10,0	1/1:11,1:11:29.79:275,30,0	1/1:20,4:24:28:380,28,0	1/1:3,0:3:2.94:18,3,0	0/0:7,0:7:20.98:0,21,262	0/1:14,2:15:34.80:179,0,35	1/1:2,4:6:2.56:34,3,0	0/1:10,4:14:5.11:214,0,5	1/1:24,4:28:37.56:605,38,0	1/1:29,3:32:6.93:438,7,0	1/1:18,0:18:23.09:250,23,0
chr10	81893446	.	T	TG	7691.59	PASS	AB=0.765;AC=35;AF=0.625;AN=56;BaseQRankSum=-0.170;DP=475;FS=7.682;HRun=0;HaplotypeScore=196.9838;InbreedingCoeff=0.3843;MQ=48.13;MQ0=10;MQRankSum=0.379;QD=21.55;ReadPosRankSum=6.737;VQSLOD=4.5410;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:21:27.64:0,28,151	0/1:3,2:5:29.90:68,0,30	0/0:34,0:12:11.21:0,11,179	0/0:36,0:10:17.97:0,18,190	1/1:15,15:30:30.45:780,30,0	0/1:12,5:16:29:210,0,29	0/0:3,0:3:5.03:0,5,31	0/1:26,2:24:37.44:305,0,37	1/1:6,2:8:4.18:143,4,0	1/1:20,13:32:21.43:665,21,0	1/1:12,10:22:26.53:502,27,0	0/1:7,1:8:20.83:41,0,21	0/0:9,0:9:25.95:0,26,189	0/0:8,0:8:11.17:0,11,186	0/1:10,7:17:1.17:349,0,1	1/1:7,4:11:30.97:312,31,0	0/1:4,5:9:13.06:102,0,13	0/1:5,4:9:22.95:140,0,23	1/1:8,6:13:6.31:347,6,0	1/1:15,12:27:43.13:696,43,0	1/1:3,0:3:3.01:43,3,0	0/0:7,0:7:21.02:0,21,234	1/1:12,7:18:20.60:357,21,0	1/1:7,0:6:2.96:21,3,0	1/1:8,6:14:22.44:371,22,0	1/1:10,14:24:65.30:818,65,0	1/1:13,21:34:12.07:948,12,0	1/1:4,14:18:34.31:474,34,0
chr10	81893448	.	TG	T	3026.60	PASS	AB=0.875;AC=49;AF=0.875;AN=56;BaseQRankSum=0.786;DP=474;FS=3.853;HRun=1;HaplotypeScore=212.9254;InbreedingCoeff=0.4528;MQ=46.29;MQ0=11;MQRankSum=-0.408;QD=7.66;ReadPosRankSum=1.761;VQSLOD=1.0391;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,1:21:29.75:180,30,0	1/1:5,0:5:6.95:36,7,0	0/0:32,1:11:6.95:0,7,160	0/0:39,0:10:16.43:0,16,155	1/1:29,0:29:39:228,39,0	1/1:17,0:16:12.76:77,13,0	1/1:2,0:2:2.60:10,3,0	1/1:28,0:24:29.43:130,29,0	1/1:5,3:8:13.81:88,14,0	1/1:33,0:32:41.65:250,42,0	1/1:21,0:21:30.55:154,31,0	1/1:8,0:8:2.38:41,2,0	1/1:8,0:8:11.98:90,12,0	1/1:8,0:8:2.77:48,3,0	1/1:17,0:17:23.39:124,23,0	1/1:11,0:11:30.63:147,31,0	1/1:9,0:9:8.52:59,9,0	1/1:8,1:9:12.42:82,12,0	1/1:14,1:13:4.53:93,5,0	1/1:26,1:27:47.61:240,48,0	1/1:3,0:3:2.97:20,3,0	0/1:6,1:7:20.12:32,0,20	1/1:19,0:18:24.76:196,25,0	0/0:7,0:6:0.45:0,0,1	1/1:14,0:14:4.91:79,5,0	1/1:23,1:24:51.01:261,51,0	1/1:33,1:34:43.65:317,44,0	1/1:18,0:18:37.70:171,38,0
chr10	81893452	.	TG	T	4108.66	PASS	AB=0.909;AC=46;AF=0.821;AN=56;BaseQRankSum=5.176;DP=482;FS=5.518;HRun=1;HaplotypeScore=215.2177;InbreedingCoeff=0.4246;MQ=50.34;MQ0=11;MQRankSum=-2.450;QD=10.25;ReadPosRankSum=2.599;VQSLOD=1.9770;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,12:21:32.33:46,0,32	1/1:4,1:5:10.92:80,11,0	0/0:35,1:14:15.90:0,16,177	0/0:40,0:10:10.08:0,10,107	1/1:28,1:29:58.43:311,58,0	1/1:15,0:14:18.58:76,19,0	0/0:1,0:4:0.10:0,0,1	1/1:24,8:28:53.29:387,53,0	1/1:9,0:9:18.49:103,18,0	1/1:31,1:31:77.78:455,78,0	1/1:19,2:21:48.25:257,48,0	1/1:9,0:9:8.65:52,9,0	0/1:5,0:5:2.79:42,0,3	0/1:8,0:8:29.65:30,0,72	1/1:15,2:17:23.71:162,24,0	1/1:11,1:12:25.44:127,25,0	1/1:10,0:10:22.64:117,23,0	1/1:8,1:9:21.57:97,22,0	1/1:15,0:13:21.93:87,22,0	1/1:24,3:27:59.19:345,59,0	1/1:3,0:3:2.60:10,3,0	0/1:8,0:8:5.27:5,0,124	1/1:17,2:18:36.06:230,36,0	1/1:6,0:5:1.31:4,1,0	1/1:15,0:15:27.95:144,28,0	1/1:23,1:24:57.45:309,57,0	1/1:28,5:33:79.28:449,79,0	1/1:16,1:17:40.88:182,41,0
chr10	81893455	.	T	TG	3854.21	PASS	AB=0.986;AC=29;AF=0.518;AN=56;BaseQRankSum=8.565;DP=499;FS=13.177;HRun=0;HaplotypeScore=225.6599;InbreedingCoeff=0.3373;MQ=50.31;MQ0=11;MQRankSum=-1.966;QD=12.01;ReadPosRankSum=5.920;VQSLOD=3.0238;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:32.85:0,33,386	1/1:5,0:5:10.98:86,11,0	0/0:38,0:13:23.62:0,24,225	0/0:42,0:11:5.39:0,5,86	1/1:28,3:31:16.58:453,17,0	0/1:15,0:14:65.29:84,0,65	1/1:4,0:4:0.97:23,1,0	0/0:32,0:28:24.88:0,25,150	0/0:8,0:8:3.22:0,3,57	1/1:27,7:33:20.19:551,20,0	1/1:20,4:24:25.47:404,25,0	0/0:9,0:9:8.44:0,8,102	0/0:5,0:5:14.56:0,15,97	0/0:9,0:9:25.78:0,26,210	1/1:20,1:21:15.26:237,15,0	1/1:12,2:14:15.03:235,15,0	0/1:10,0:10:25.11:25,0,25	0/1:9,0:9:11.96:59,0,12	0/1:15,0:13:37.53:55,0,38	1/1:25,3:28:0.32:403,0,0	1/1:3,0:3:2.37:8,2,0	0/0:8,0:8:23.04:0,23,242	0/1:19,0:18:0.92:133,0,1	0/0:6,0:5:2.39:0,2,10	0/1:17,2:19:20.25:197,0,20	1/1:22,1:23:3.54:203,4,0	1/1:30,0:31:57.54:546,58,0	0/1:16,0:16:32.20:154,0,32
chr10	81893458	.	T	TTG	7457.11	PASS	AB=0.860;AC=32;AF=0.593;AN=54;BaseQRankSum=4.025;DP=498;FS=6.429;HRun=0;HaplotypeScore=220.5392;InbreedingCoeff=0.3420;MQ=50.72;MQ0=12;MQRankSum=-4.981;QD=20.32;ReadPosRankSum=4.532;VQSLOD=4.0020;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:28.25:0,28,337	0/1:3,1:4:3.98:56,0,4	0/0:38,0:13:27.08:0,27,222	0/0:40,0:11:7.65:0,8,84	1/1:16,14:30:60.06:842,60,0	0/1:11,5:15:91.59:261,0,92	0/0:4,0:4:5.77:0,6,31	0/1:32,1:29:39.46:235,0,39	0/1:6,0:6:24.60:25,0,35	1/1:25,8:32:82.32:811,82,0	1/1:16,10:26:34.36:586,34,0	0/1:9,0:9:49.78:50,0,55	0/0:6,0:6:2.86:0,3,112	0/0:10,0:10:22.19:0,22,219	1/1:14,7:21:36.84:467,37,0	1/1:11,4:15:26.55:296,27,0	0/1:8,2:10:4.79:112,0,5	0/1:6,3:9:19.35:155,0,19	1/1:14,4:16:36.87:352,37,0	1/1:15,10:26:59.21:686,59,0	./.	0/0:9,0:9:25.72:0,26,249	1/1:13,5:18:20.94:365,21,0	1/1:6,0:5:2.78:28,3,0	1/1:14,5:19:21.20:329,21,0	1/1:16,8:24:51.82:632,52,0	1/1:12,15:27:51.68:890,52,0	0/1:11,5:16:11.09:279,0,11
chr10	81893461	.	TTG	T	2289.70	PASS	AB=0.978;AC=37;AF=0.685;AN=54;BaseQRankSum=5.601;DP=485;FS=6.176;HRun=0;HaplotypeScore=230.4055;InbreedingCoeff=0.2282;MQ=46.60;MQ0=12;MQRankSum=-1.438;QD=5.99;ReadPosRankSum=4.392;VQSLOD=2.3197;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:25.84:0,26,318	0/1:4,0:4:0.61:12,0,1	0/0:36,0:11:14.56:0,15,118	0/0:38,0:8:8.76:0,9,96	1/1:29,1:30:45.11:234,45,0	0/1:16,0:15:15.01:15,0,128	1/1:3,0:3:4.52:24,5,0	1/1:32,0:28:38.41:223,38,0	0/0:6,0:6:6.88:0,7,44	1/1:33,0:32:44.80:220,45,0	1/1:25,2:26:34.89:212,35,0	0/1:9,0:9:4:4,0,74	0/1:6,0:6:7.61:61,0,8	0/1:10,0:10:39.77:58,0,40	1/1:20,0:20:12.71:126,13,0	1/1:14,1:15:12.58:80,13,0	0/1:9,0:9:2.86:46,0,3	1/1:10,0:10:4.19:47,4,0	1/1:16,0:14:17.74:100,18,0	1/1:27,0:27:46.55:206,47,0	./.	0/1:8,0:9:25.84:35,0,26	0/1:16,2:17:10.08:100,0,10	1/1:6,0:5:3.37:20,3,0	1/1:17,0:17:9.54:94,10,0	1/1:22,1:23:21.20:237,21,0	1/1:27,1:28:44.52:272,45,0	0/1:14,0:14:19.95:30,0,20
chr10	81893464	.	TTG	T	2985.38	PASS	AB=0.997;AC=42;AF=0.778;AN=54;BaseQRankSum=-7.574;DP=464;FS=2.155;HRun=0;HaplotypeScore=222.2024;InbreedingCoeff=0.1636;MQ=46.55;MQ0=11;MQRankSum=-2.334;QD=7.28;ReadPosRankSum=-8.268;VQSLOD=1.2476;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:21.13:0,21,192	1/1:4,0:4:0.65:7,1,0	0/0:35,0:11:8.62:0,9,80	0/1:37,1:9:0.50:0,0,75	1/1:29,0:29:14.38:245,14,0	0/1:16,0:15:46.97:47,0,81	1/1:4,0:4:7.48:42,7,0	1/1:30,3:29:57.04:429,57,0	1/1:6,0:6:1.97:42,2,0	1/1:31,0:30:22.66:210,23,0	1/1:27,0:26:21.26:241,21,0	0/1:9,0:9:27.82:55,0,28	0/1:6,0:6:0.54:67,0,1	0/1:9,0:9:1.83:82,0,2	1/1:20,0:20:22.98:173,23,0	1/1:14,0:14:5.32:49,5,0	0/1:9,0:9:1.57:66,0,2	0/1:10,0:10:6.80:72,0,7	1/1:16,0:14:18.94:184,19,0	1/1:25,0:25:23.42:199,23,0	./.	1/1:8,0:8:4.01:103,4,0	0/1:18,0:17:28.16:102,0,28	1/1:5,0:4:5.59:31,6,0	1/1:17,0:17:7.37:106,7,0	1/1:20,0:20:27.68:264,28,0	1/1:27,0:27:22.96:249,23,0	1/1:9,0:9:5.42:65,5,0
chr10	81893469	.	T	TTGG	8711.48	PASS	AB=0.917;AC=28;AF=0.519;AN=54;BaseQRankSum=7.123;DP=467;FS=38.994;HRun=0;HaplotypeScore=219.1018;InbreedingCoeff=0.6351;MQ=51.17;MQ0=11;MQRankSum=-2.304;QD=29.04;ReadPosRankSum=7.206;VQSLOD=3.4535;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:17.39:0,17,195	1/1:1,2:4:12.04:206,12,0	0/0:39,0:14:23.42:0,23,240	0/0:37,0:9:9.41:0,9,111	1/1:13,7:31:54.86:944,55,0	0/1:16,0:15:99:100,0,202	0/0:4,0:4:8.55:0,9,47	0/0:28,0:24:47.21:0,47,489	0/0:6,0:6:10.55:0,11,89	1/1:12,11:31:68.56:1149,69,0	1/1:11,11:28:53.59:866,54,0	0/0:9,0:9:8.69:0,9,96	0/0:8,0:8:20.94:0,21,243	0/0:7,0:7:20.87:0,21,210	1/1:9,8:20:45.77:669,46,0	1/1:4,6:15:37.32:627,37,0	0/1:7,1:9:44.96:104,0,45	1/1:8,1:10:23.87:251,24,0	0/1:14,2:15:38.41:216,0,38	1/1:12,6:26:58.99:952,59,0	./.	0/0:7,0:7:21:0,21,272	0/1:17,0:16:47.15:168,0,47	0/0:4,0:3:3.01:0,3,31	1/1:7,6:18:14.33:453,14,0	1/1:9,5:18:41.65:519,42,0	1/1:14,3:28:73.86:1108,74,0	1/1:6,1:11:26.06:379,26,0
chr10	81893470	.	T	TGG	4289.17	PASS	AB=0.959;AC=27;AF=0.500;AN=54;BaseQRankSum=8.723;DP=457;FS=32.654;HRun=0;HaplotypeScore=224.6869;InbreedingCoeff=0.5768;MQ=51.53;MQ0=11;MQRankSum=-2.070;QD=14.49;ReadPosRankSum=6.988;VQSLOD=3.2702;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:26.22:0,26,241	1/1:4,0:4:11.21:85,11,0	0/0:38,0:13:26.21:0,26,242	0/0:36,1:9:12.78:0,13,123	1/1:29,1:30:29.11:422,29,0	0/1:16,0:15:82.44:82,0,302	0/0:4,0:4:8.86:0,9,70	0/0:25,0:21:46.59:0,47,545	0/0:5,0:5:10.56:0,11,93	1/1:30,1:31:60.40:533,60,0	1/1:26,2:27:51.51:459,52,0	0/0:8,0:8:15.22:0,15,140	0/0:8,0:8:23.09:0,23,287	0/0:7,0:7:21.06:0,21,274	1/1:19,0:19:43.65:313,44,0	1/1:14,1:15:30.38:314,30,0	0/1:9,0:9:39.54:40,0,67	1/1:9,1:10:24.94:232,25,0	0/1:17,1:16:45.01:189,0,45	1/1:24,0:24:39.08:380,39,0	./.	0/0:7,0:7:21.07:0,21,289	0/1:17,0:16:99:141,0,147	0/0:4,0:3:3.01:0,3,42	1/1:18,0:18:14.49:194,14,0	1/1:18,0:18:32.50:247,33,0	1/1:27,0:28:61.32:487,61,0	0/1:9,0:11:14.65:172,0,15
chr10	81893473	.	T	TGG	2040.62	PASS	AB=0.897;AC=16;AF=0.286;AN=56;BaseQRankSum=9.476;DP=457;FS=25.969;HRun=0;HaplotypeScore=216.9601;InbreedingCoeff=-0.3930;MQ=51.93;MQ0=10;MQRankSum=-0.828;QD=6.87;ReadPosRankSum=1.815;VQSLOD=1.3915;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:30.65:0,31,292	0/1:4,0:4:4.69:5,0,50	0/0:36,0:12:11.46:0,11,206	0/0:37,0:9:10.79:0,11,158	0/1:28,3:31:99:204,0,209	0/1:11,5:15:99:179,0,343	0/0:4,0:4:7.54:0,8,59	0/0:25,0:21:50.84:0,51,586	0/0:5,0:5:11.98:0,12,104	0/1:28,2:30:99:114,0,285	0/1:26,2:27:99:193,0,171	0/0:8,1:9:21.99:0,22,196	0/0:8,0:8:22.62:0,23,311	0/0:7,0:7:21.07:0,21,280	0/1:17,3:20:99:159,0,133	0/1:15,0:15:59.38:59,0,87	0/1:8,1:9:31.73:32,0,127	0/1:8,2:10:69.93:100,0,70	0/1:13,3:15:99:101,0,129	0/1:22,2:24:99:139,0,185	0/0:1,0:1:0:0,0,0	0/0:6,0:6:18.01:0,18,229	0/1:12,5:16:99:209,0,143	0/0:4,0:3:5.93:0,6,61	0/1:17,1:18:73.84:74,0,120	0/1:14,4:18:91.09:248,0,91	0/1:26,3:29:99:300,0,199	0/1:12,0:12:78.01:78,0,125
chr10	81894237	.	A	AT	11565.59	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-1.527;DP=504;FS=1.849;HRun=7;HaplotypeScore=58.3158;InbreedingCoeff=0.9921;MQ=71.93;MQ0=0;MQRankSum=-4.520;QD=30.36;ReadPosRankSum=1.327;VQSLOD=5.3764;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:68.84:0,69,633	1/1:0,7:7:21.06:254,21,0	0/0:18,0:18:41.30:0,41,392	0/0:6,0:6:11.97:0,12,107	1/1:3,15:18:48.14:572,48,0	1/1:0,18:18:48.06:560,48,0	0/0:12,0:12:30.05:0,30,290	1/1:5,28:33:81.20:941,81,0	1/1:1,11:12:24.07:290,24,0	1/1:1,23:24:69.20:820,69,0	1/1:2,16:18:42.09:491,42,0	1/1:0,11:11:33.10:399,33,0	0/0:25,0:25:66.10:0,66,637	0/0:19,0:19:51.05:0,51,481	1/1:1,21:22:60.12:706,60,0	1/1:3,16:19:33.03:380,33,0	1/1:1,18:19:48.15:580,48,0	1/1:0,17:18:48.15:576,48,0	1/1:1,16:17:48.13:567,48,0	1/1:1,21:22:63.15:744,63,0	1/1:0,10:10:23.99:270,24,0	0/0:17,0:17:45.05:0,45,428	1/1:2,15:17:33.02:379,33,0	1/1:0,21:21:54.17:652,54,0	1/1:0,10:10:24.07:290,24,0	1/1:1,21:22:63.19:761,63,0	1/1:2,27:30:81.24:969,81,0	1/1:2,11:13:30.09:362,30,0
chr10	81894414	.	TTGTTA	T	20409.17	PASS	AB=0.959;AC=47;AF=0.839;AN=56;BaseQRankSum=5.837;DP=598;FS=13.533;HRun=0;HaplotypeScore=221.1296;InbreedingCoeff=0.0784;MQ=62.08;MQ0=0;MQRankSum=-8.919;QD=35.87;ReadPosRankSum=-0.751;VQSLOD=3.4717;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:65.84:69,0,66	1/1:2,7:9:23.97:414,24,0	0/1:24,0:18:50.36:50,0,386	0/1:32,0:26:91.97:92,0,571	1/1:6,14:20:48.08:841,48,0	1/1:5,14:19:57.16:1078,57,0	0/1:21,0:21:44.57:45,0,434	1/1:20,10:29:69.06:1043,69,0	1/1:2,11:13:39.13:786,39,0	1/1:10,22:32:93.19:1729,93,0	1/1:5,15:20:57.18:1117,57,0	1/1:3,15:18:51.16:996,51,0	0/1:29,0:29:31.51:32,0,1148	0/1:29,0:29:23.70:24,0,1350	1/1:4,16:20:60.04:1119,60,0	1/1:2,14:16:48.16:999,48,0	1/1:12,10:23:49.78:862,50,0	0/1:6,4:10:10.06:350,0,10	1/1:5,13:17:39.05:723,39,0	1/1:11,18:29:84.17:1594,84,0	1/1:7,4:11:27.04:461,27,0	0/0:29,0:29:51.16:0,51,1367	1/1:7,8:15:39.13:793,39,0	1/1:8,9:17:40.31:711,40,0	1/1:9,8:17:42.04:755,42,0	1/1:9,21:30:84.11:1508,84,0	1/1:9,23:32:93.12:1710,93,0	1/1:3,6:9:27.09:510,27,0
chr10	81894433	.	TTTTG	T	11355.47	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=11.456;DP=605;FS=17.959;HRun=0;HaplotypeScore=263.6573;InbreedingCoeff=0.5725;MQ=50.53;MQ0=5;MQRankSum=-11.235;QD=25.63;ReadPosRankSum=2.075;VQSLOD=3.4636;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:26:12.33:128,12,0	1/1:4,6:10:20.88:281,21,0	0/0:24,0:14:24.01:0,24,298	0/0:37,0:27:14.52:0,15,375	1/1:8,13:21:35.37:516,35,0	0/1:19,0:19:5.98:6,0,374	1/1:22,0:22:9.56:167,10,0	0/1:20,0:19:53.96:54,0,200	0/1:17,0:17:30.88:31,0,306	1/1:7,20:27:75.12:1154,75,0	1/1:5,13:18:44.96:666,45,0	0/1:16,0:16:29.60:30,0,276	0/0:27,0:27:66.15:0,66,1207	0/0:30,0:30:81.23:0,81,1755	1/1:5,15:20:59.75:840,60,0	1/1:4,16:20:54.18:884,54,0	1/1:15,12:27:52.63:778,53,0	1/1:6,5:11:17.11:300,17,0	1/1:10,11:20:44.71:622,45,0	1/1:7,17:24:59.96:903,60,0	1/1:8,2:10:14.83:154,15,0	0/0:28,0:28:72.17:0,72,1581	0/1:17,0:17:9.50:9,0,191	0/0:16,0:16:7.06:0,7,219	1/1:4,11:15:38.16:585,38,0	1/1:13,23:36:98.46:1452,98,0	1/1:10,25:35:90.14:1400,90,0	1/1:3,7:9:27.02:396,27,0
chr10	81894446	.	TTTGTTTGG	T	944.58	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=8.925;DP=614;FS=34.867;HRun=0;HaplotypeScore=349.3843;InbreedingCoeff=-0.2288;MQ=48.99;MQ0=7;MQRankSum=-10.132;QD=2.83;ReadPosRankSum=4.707;VQSLOD=1.3859;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:48.61:265,0,49	0/1:8,0:8:18.58:26,0,19	0/0:24,0:15:43.65:0,44,680	0/0:30,0:22:12.05:0,12,740	0/0:22,0:22:6.48:0,6,271	0/0:23,0:23:29.10:0,29,1406	1/1:3,16:19:21.07:519,21,0	0/1:19,0:19:8.94:9,0,725	0/0:18,0:18:14.70:0,15,972	0/1:34,0:33:21.37:21,0,264	0/1:24,0:24:38.78:39,0,224	0/0:18,0:18:11.52:0,12,959	0/0:27,0:27:78.15:0,78,2302	0/0:30,0:30:87.26:0,87,3212	0/1:22,0:22:53.04:53,0,110	0/1:21,0:21:10.72:11,0,139	0/0:28,0:28:26.98:0,27,390	0/1:12,0:12:1.04:1,0,154	0/1:23,0:23:9.53:10,0,212	0/1:24,0:24:47.71:48,0,86	0/1:11,0:11:35.45:35,0,43	0/0:27,0:27:81.15:0,81,2907	0/0:19,0:19:25.52:0,26,914	0/0:14,0:14:18.89:0,19,650	0/1:14,0:14:17.96:18,0,91	0/1:34,0:34:1.21:1,0,173	0/1:32,0:32:13.59:14,0,149	0/1:11,0:10:22.52:32,0,23
chr10	81894500	.	C	CTT	15436.66	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=14.909;DP=642;FS=13.416;HRun=8;HaplotypeScore=188.1477;InbreedingCoeff=0.9891;MQ=63.17;MQ0=1;MQRankSum=-8.731;QD=33.63;ReadPosRankSum=0.208;VQSLOD=2.9703;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:48.04:0,48,584	1/1:4,6:10:26.97:344,27,0	0/0:20,0:15:33.05:0,33,356	0/0:20,0:19:30.10:0,30,330	1/1:7,15:23:59.45:756,59,0	1/1:3,16:18:48.16:762,48,0	0/0:27,0:27:54.14:0,54,602	1/1:9,0:33:63.76:281,64,0	1/1:1,20:24:71.18:1019,71,0	1/1:11,22:35:86.57:1170,87,0	1/1:4,25:29:78.18:1161,78,0	1/1:2,15:17:42.14:667,42,0	0/0:34,0:34:87.20:0,87,959	0/0:22,0:22:51.12:0,51,568	1/1:8,12:20:47.99:646,48,0	1/1:4,23:27:69.23:1078,69,0	1/1:6,17:24:51.17:783,51,0	1/1:4,9:13:33.03:464,33,0	1/1:6,13:21:50.48:613,50,0	1/1:7,14:24:62.88:785,63,0	1/1:2,15:17:42.14:644,42,0	0/0:33,0:33:90.10:0,90,958	1/1:1,24:25:63.21:1000,63,0	1/1:3,15:18:42.14:654,42,0	1/1:2,14:17:42.10:633,42,0	1/1:12,20:33:80.91:1032,81,0	1/1:10,14:27:65.90:805,66,0	1/1:0,3:3:9.03:142,9,0
chr10	81894824	.	G	GTAAGAA	37785.98	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=17.136;DP=713;FS=8.765;HRun=0;HaplotypeScore=213.3309;InbreedingCoeff=0.9956;MQ=79.56;MQ0=0;MQRankSum=-20.086;QD=79.72;ReadPosRankSum=-1.664;VQSLOD=4.5599;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,2760	1/1:7,10:17:42.14:1219,42,0	0/0:22,0:22:54.17:0,54,1189	0/0:31,0:31:77.35:0,77,1684	1/1:10,16:28:66.01:1574,66,0	1/1:7,7:14:33.07:984,33,0	0/0:39,0:39:99:0,108,2484	1/1:21,16:38:99:3317,99,0	1/1:7,18:25:72.21:2213,72,0	1/1:9,16:25:66.23:2163,66,0	1/1:7,16:25:60.12:1796,60,0	1/1:9,15:25:63.21:1964,63,0	0/0:31,0:31:90.31:0,90,2102	0/0:29,0:29:81.28:0,81,1894	1/1:10,19:30:87.30:2946,87,0	1/1:7,17:27:72.25:2189,72,0	1/1:9,11:20:48.16:1462,48,0	1/1:4,2:6:15.05:533,15,0	1/1:16,11:27:60.16:1865,60,0	1/1:1,23:25:72.18:2283,72,0	1/1:6,9:15:36.12:1137,36,0	0/0:46,0:46:99:0,132,3033	1/1:6,12:19:48.16:1577,48,0	1/1:5,15:20:50.72:1488,51,0	1/1:8,13:21:51.13:1570,51,0	1/1:16,16:32:75.26:2505,75,0	1/1:8,20:29:75.21:2478,75,0	1/1:2,4:6:18.06:524,18,0
chr10	81897165	.	T	TAA	726.15	PASS	AB=1.000;AC=7;AF=0.583;AN=12;BaseQRankSum=-4.776;DP=108;FS=5.391;HRun=14;HaplotypeScore=68.9953;MQ=103.95;MQ0=2;MQRankSum=-2.338;QD=15.79;ReadPosRankSum=3.063;VQSLOD=2.9385;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:4:0:0,0,0	./.	0/0:38,0:12:16.68:0,17,116	0/0:24,0:13:16.14:0,16,78	./.	./.	./.	./.	./.	./.	./.	./.	1/1:2,9:12:12.03:146,12,0	1/1:3,18:25:44.50:547,45,0	./.	./.	./.	./.	./.	./.	./.	1/1:3,2:5:11.98:123,12,0	./.	./.	./.	./.	./.	./.
chr10	81897691	.	ACT	A	17596.34	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=13.858;DP=579;FS=0.000;HRun=0;HaplotypeScore=109.6587;InbreedingCoeff=0.9937;MQ=95.94;MQ0=3;MQRankSum=-7.429;QD=39.90;ReadPosRankSum=5.287;VQSLOD=6.7402;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:39.12:0,39,663	1/1:0,5:5:12.04:172,12,0	0/0:22,0:22:63.20:0,63,1118	0/0:36,0:36:99:0,99,1760	1/1:2,37:39:99:1496,105,0	1/1:2,33:35:99:1389,99,0	0/0:11,0:11:33.11:0,33,605	1/1:0,28:28:84.28:1203,84,0	1/1:1,21:22:60.20:860,60,0	1/1:0,27:27:81.26:1142,81,0	1/1:2,29:31:87.29:1232,87,0	1/1:0,17:17:51.17:731,51,0	0/0:18,0:18:51.17:0,51,926	0/0:18,0:18:54.19:0,54,990	1/1:0,22:22:63.21:903,63,0	1/1:0,13:13:39.13:559,39,0	1/1:0,9:9:27.09:387,27,0	1/1:0,9:9:27.09:387,27,0	1/1:0,14:13:39.13:559,39,0	1/1:0,23:23:69.19:954,69,0	1/1:1,17:18:45.15:645,45,0	0/0:18,0:18:54.19:0,54,990	1/1:0,21:20:51.13:708,51,0	1/1:0,9:9:27.09:387,27,0	1/1:0,23:23:60.12:814,60,0	1/1:0,32:31:93.31:1331,93,0	1/1:1,32:33:93.27:1310,93,0	1/1:1,10:11:30.10:430,30,0
chr10	81897938	.	AAAATT	A	15371.15	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-1.116;DP=644;FS=4.759;HRun=0;HaplotypeScore=127.6355;InbreedingCoeff=0.5573;MQ=65.11;MQ0=11;MQRankSum=1.694;QD=35.01;ReadPosRankSum=-0.111;VQSLOD=4.6735;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:68.05:0,68,1452	1/1:0,11:11:21.07:391,21,0	0/0:52,0:27:44.80:0,45,1106	0/0:65,0:21:18.98:0,19,580	1/1:1,30:31:87.29:1426,87,0	0/1:15,0:15:99:223,0,211	1/1:0,11:11:9.03:192,9,0	1/1:3,22:23:64.45:1096,64,0	0/1:24,0:24:99:528,0,291	1/1:0,21:21:63.22:1246,63,0	1/1:1,24:25:27.64:1212,28,0	0/1:22,0:22:99:318,0,331	0/0:26,0:26:75.26:0,75,1978	0/0:20,0:20:60.19:0,60,1507	1/1:0,15:15:30.10:639,30,0	1/1:0,17:17:36.12:768,36,0	1/1:0,22:22:30.10:639,30,0	1/1:3,16:19:11.94:382,12,0	1/1:2,15:16:45.15:824,45,0	1/1:2,27:29:75.21:1310,75,0	1/1:0,15:15:12.04:221,12,0	0/0:15,0:15:45.14:0,45,1044	0/1:15,0:15:99:156,0,347	0/1:19,0:19:99:250,0,300	1/1:1,11:12:30.10:616,30,0	1/1:1,28:29:84.27:1526,84,0	1/1:2,28:29:50.86:1087,51,0	1/1:0,15:15:15.05:320,15,0
chr10	81898604	.	C	CA	13377.55	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=12.719;DP=566;FS=16.599;HRun=3;HaplotypeScore=146.4687;InbreedingCoeff=0.9777;MQ=83.64;MQ0=0;MQRankSum=-10.917;QD=33.70;ReadPosRankSum=-1.736;VQSLOD=2.3792;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.18:0,69,813	1/1:1,7:8:18.06:252,18,0	0/0:20,0:20:41.96:0,42,479	0/0:24,0:24:63.19:0,63,749	1/1:4,21:25:48.12:649,48,0	1/1:1,22:23:69.19:941,69,0	0/0:18,0:18:48.15:0,48,576	1/1:8,29:37:96.26:1279,96,0	1/1:4,14:18:45.08:587,45,0	1/1:2,26:28:63.05:857,63,0	1/1:2,24:26:60.16:816,60,0	1/1:2,10:12:30.09:403,30,0	0/0:38,0:38:99:0,105,1259	0/0:26,0:26:75.23:0,75,900	1/1:6,19:25:57.11:754,57,0	1/1:4,19:23:54.17:738,54,0	1/1:2,10:12:30.06:398,30,0	1/1:0,5:5:6.02:84,6,0	1/1:1,15:16:39.13:546,39,0	1/1:3,21:24:63.21:881,63,0	1/1:1,15:16:42.10:566,42,0	0/0:18,0:18:48.15:0,48,576	1/1:0,24:24:66.22:923,66,0	1/1:0,9:9:27:334,27,0	1/1:2,19:21:60.20:838,60,0	1/1:1,24:25:66.22:920,66,0	1/1:2,8:10:18.06:252,18,0	1/1:1,9:10:27.08:361,27,0
chr10	81898639	.	A	AGCTATCT	28703.75	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=11.633;DP=568;FS=93.045;HRun=0;HaplotypeScore=181.1435;InbreedingCoeff=0.9668;MQ=74.91;MQ0=0;MQRankSum=-16.495;QD=71.94;ReadPosRankSum=0.145;VQSLOD=1.6716;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.19:0,60,1471	1/1:6,3:9:12.04:362,12,0	0/0:28,0:30:86.80:0,87,1954	0/0:16,0:16:39.08:0,39,813	1/1:13,20:33:45.15:1782,45,0	1/1:6,14:20:39.12:1459,39,0	0/0:16,0:16:45.14:0,45,1115	1/1:18,13:32:87.29:2911,87,0	1/1:5,15:21:54.18:2084,54,0	1/1:11,20:32:68.91:2519,69,0	1/1:9,15:24:33.11:1243,33,0	1/1:3,7:10:21.07:836,21,0	0/0:42,0:42:99:0,114,2874	0/0:24,0:24:66.23:0,66,1600	1/1:6,14:20:27.09:1075,27,0	1/1:9,15:24:33.08:1124,33,0	1/1:2,5:7:18.06:689,18,0	1/1:4,2:6:9.03:276,9,0	1/1:16,5:21:39.60:1109,40,0	1/1:8,12:21:33.11:1314,33,0	1/1:1,5:6:9.03:358,9,0	0/0:19,0:19:57.18:0,57,1425	1/1:7,16:23:45.14:1594,45,0	1/1:5,4:9:18.04:550,18,0	1/1:6,17:23:57.20:2270,57,0	1/1:11,20:31:75.25:2726,75,0	1/1:5,16:21:48.16:1836,48,0	1/1:0,5:6:15.05:586,15,0
chr10	81898996	.	A	AT	13677.46	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=17.088;DP=590;FS=24.899;HRun=0;HaplotypeScore=147.9581;InbreedingCoeff=0.9677;MQ=85.11;MQ0=0;MQRankSum=-9.114;QD=34.28;ReadPosRankSum=4.801;VQSLOD=2.8269;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.20:0,66,898	1/1:0,7:7:21.07:282,21,0	0/0:25,0:25:72.21:0,72,959	0/0:35,0:35:87.34:0,87,1272	1/1:2,30:32:68.67:899,69,0	1/1:0,23:23:66.22:906,66,0	0/0:22,0:22:63.19:0,63,862	1/1:1,25:26:56.87:781,57,0	1/1:0,21:21:48.16:653,48,0	1/1:2,36:38:99:1414,102,0	1/1:0,20:20:54.18:723,54,0	1/1:0,17:17:45.15:601,45,0	0/0:19,0:19:57.19:0,57,795	0/0:28,0:28:84.27:0,84,1157	1/1:1,17:18:46.03:611,46,0	1/1:0,16:16:42.14:569,42,0	1/1:0,15:15:45.01:557,45,0	1/1:0,9:9:27.09:367,27,0	1/1:3,15:18:44.63:601,45,0	1/1:0,24:24:66.05:867,66,0	1/1:1,14:15:30.99:411,31,0	0/0:39,0:39:99:0,117,1602	1/1:0,23:23:66.18:877,66,0	1/1:2,11:13:30.06:385,30,0	1/1:0,19:19:51.17:699,51,0	1/1:2,22:24:54.18:746,54,0	1/1:0,19:19:51.17:687,51,0	1/1:0,2:2:3.01:42,3,0
chr10	81899846	.	GT	G	12009.26	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=13.523;DP=552;FS=0.000;HRun=5;HaplotypeScore=92.7277;InbreedingCoeff=0.9976;MQ=89.46;MQ0=0;MQRankSum=-5.043;QD=29.36;ReadPosRankSum=3.983;VQSLOD=5.0147;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.26:0,81,1087	1/1:0,7:7:21.06:238,21,0	0/0:28,0:27:23.37:0,23,671	0/0:18,0:18:33.10:0,33,438	1/1:0,21:21:57.16:645,57,0	1/1:0,22:22:57.16:643,57,0	0/0:11,0:11:33.10:0,33,434	1/1:2,32:34:90.11:932,90,0	1/1:0,30:30:81.23:918,81,0	1/1:2,17:19:51.14:576,51,0	1/1:2,25:27:72.09:787,72,0	1/1:1,10:11:30.09:340,30,0	0/0:27,0:27:78.25:0,78,1048	0/0:16,0:16:42.13:0,42,559	1/1:2,20:22:54.15:612,54,0	1/1:1,18:19:42.12:476,42,0	1/1:1,18:19:47.81:543,48,0	1/1:1,13:14:36.10:407,36,0	1/1:1,16:17:48.14:544,48,0	1/1:0,30:30:87.16:967,87,0	1/1:0,7:7:21.06:238,21,0	0/0:14,0:14:33.08:0,33,404	1/1:2,19:21:45.13:507,45,0	1/1:1,11:12:30.09:340,30,0	1/1:0,18:18:45.13:509,45,0	1/1:0,24:24:72.19:802,72,0	1/1:1,22:23:57.16:645,57,0	1/1:0,12:12:30.09:340,30,0
chr10	81900073	.	TTGTGTGTG	T	5825.44	PASS	AB=0.579;AC=36;AF=0.692;AN=52;BaseQRankSum=11.660;DP=512;FS=3.159;HRun=0;HaplotypeScore=226.0330;InbreedingCoeff=0.7588;MQ=53.74;MQ0=2;MQRankSum=-9.895;QD=19.75;ReadPosRankSum=-0.403;VQSLOD=4.0552;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:58:99:0,114,2168	1/1:0,8:8:9.03:241,9,0	0/0:22,0:12:26.66:0,27,495	0/0:12,0:8:14.11:0,14,252	0/1:3,21:24:0.21:1,0,0	1/1:1,16:17:6.02:161,6,0	0/0:29,0:29:81.25:0,81,2890	1/1:11,2:13:23.53:330,24,0	1/1:4,22:26:8.96:178,9,0	1/1:7,10:17:30.06:644,30,0	./.	1/1:4,16:20:9.03:241,9,0	0/0:5,0:26:48.14:0,48,971	0/0:5,0:26:57.18:0,57,1271	1/1:1,13:14:6.02:160,6,0	1/1:1,14:15:3.01:80,3,0	1/1:4,10:14:15.05:400,15,0	1/1:1,8:9:21.07:542,21,0	1/1:3,7:10:23.97:469,24,0	1/1:2,18:20:9.03:197,9,0	./.	0/0:2,0:17:30.10:0,30,659	1/1:4,18:22:3.01:80,3,0	0/1:4,6:10:0.02:0,0,0	1/1:0,9:9:3.01:54,3,0	1/1:2,17:19:39.11:941,39,0	1/1:2,15:17:36.12:960,36,0	1/1:5,6:11:6.02:146,6,0
chr10	81900255	.	CG	C	15140.94	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=15.361;DP=657;FS=6.022;HRun=3;HaplotypeScore=173.9206;InbreedingCoeff=0.9997;MQ=61.10;MQ0=1;MQRankSum=-9.576;QD=32.77;ReadPosRankSum=1.112;VQSLOD=3.4426;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,1899	1/1:0,10:10:27.08:335,27,0	0/0:24,0:24:61.16:0,61,795	0/0:19,0:18:48.11:0,48,640	1/1:1,24:25:72.23:890,72,0	1/1:1,15:16:42.13:520,42,0	0/0:30,0:30:90.28:0,90,1270	1/1:1,26:27:72.11:827,72,0	1/1:0,23:23:69.22:853,69,0	1/1:2,23:26:72.18:868,72,0	1/1:1,16:17:48.15:590,48,0	1/1:1,27:28:81.25:991,81,0	0/0:30,0:30:87.26:0,87,1213	0/0:28,0:28:84.28:0,84,1208	1/1:1,18:19:54.17:668,54,0	1/1:0,18:18:54.17:668,54,0	1/1:1,29:30:81.25:999,81,0	1/1:3,21:24:63.20:780,63,0	1/1:0,22:21:60.19:741,60,0	1/1:0,21:21:57.18:705,57,0	1/1:1,36:37:84.26:1037,84,0	0/0:15,0:15:45.15:0,45,647	1/1:2,16:18:48.15:594,48,0	1/1:2,24:26:45.14:557,45,0	1/1:1,11:12:33.10:409,33,0	1/1:1,30:31:87.27:1068,87,0	1/1:2,18:20:48.15:594,48,0	1/1:0,12:12:36.11:446,36,0
chr10	81900566	.	AAC	A	5029.21	PASS	AC=40;AF=0.741;AN=54;BaseQRankSum=9.884;DP=260;FS=47.306;HRun=0;HaplotypeScore=86.1071;InbreedingCoeff=0.8247;MQ=73.40;MQ0=0;MQRankSum=-6.304;QD=29.76;ReadPosRankSum=-2.781;VQSLOD=2.9513;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:51.16:0,51,903	1/1:0,3:3:3.01:43,3,0	0/0:9,0:8:20.75:0,21,229	0/0:10,0:10:8.57:0,9,141	1/1:1,12:13:18.06:257,18,0	1/1:0,9:9:21.07:286,21,0	0/0:11,0:11:27.09:0,27,495	1/1:2,21:23:60.01:667,60,0	1/1:2,7:9:27.06:349,27,0	1/1:1,11:12:30.10:428,30,0	1/1:3,7:10:15.05:214,15,0	1/1:1,3:4:9.02:110,9,0	0/0:18,0:18:51.15:0,51,868	0/0:12,0:12:30.10:0,30,550	1/1:0,5:5:15.05:214,15,0	1/1:0,11:11:27.09:386,27,0	1/1:4,6:10:27.04:344,27,0	1/1:0,1:1:3.01:43,3,0	1/1:1,9:10:27.07:351,27,0	1/1:0,4:4:9.03:128,9,0	1/1:1,4:5:3.01:43,3,0	0/0:3,0:3:9.03:0,9,165	1/1:0,6:6:6.02:86,6,0	./.	1/1:0,3:3:9.03:128,9,0	1/1:1,13:14:39.08:485,39,0	1/1:4,8:12:27.09:374,27,0	1/1:5,0:5:11.96:93,12,0
chr10	81900584	.	T	TTA	896.84	PASS	AB=1.000;AC=29;AF=0.690;AN=42;BaseQRankSum=7.632;DP=193;FS=24.599;HRun=0;HaplotypeScore=81.3868;InbreedingCoeff=0.6053;MQ=63.87;MQ0=0;MQRankSum=-7.046;QD=8.79;ReadPosRankSum=1.159;VQSLOD=1.6569;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:45.10:0,45,571	./.	0/1:6,0:5:4.88:12,0,5	0/0:8,0:7:8.59:0,9,97	1/1:8,1:9:3.01:30,3,0	./.	0/0:9,0:9:21.07:0,21,275	1/1:8,2:10:6.02:103,6,0	1/1:7,0:7:2.99:23,3,0	1/1:10,1:11:21.05:234,21,0	1/1:6,1:7:6.01:60,6,0	1/1:3,0:3:2.99:23,3,0	0/0:18,0:18:48.16:0,48,631	0/0:12,0:12:24.08:0,24,315	1/1:4,0:4:6.01:60,6,0	1/1:8,1:9:9.02:91,9,0	1/1:6,1:7:6.02:81,6,0	./.	1/1:7,0:7:3.01:30,3,0	1/1:3,1:4:3.01:30,3,0	./.	0/0:4,0:4:12.04:0,12,156	./.	./.	1/1:3,0:3:6.01:61,6,0	1/1:7,0:7:12.02:122,12,0	1/1:5,3:8:9.02:91,9,0	./.
chr10	81900589	.	T	TATATAC	3863.39	PASS	AB=1.000;AC=29;AF=0.690;AN=42;BaseQRankSum=7.751;DP=166;FS=24.814;HRun=0;HaplotypeScore=74.9654;InbreedingCoeff=0.6724;MQ=59.31;MQ0=0;MQRankSum=-7.602;QD=46.55;ReadPosRankSum=-1.848;VQSLOD=1.4057;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:45.15:0,45,1022	./.	0/1:3,0:3:2.34:45,0,2	0/0:9,0:6:8.71:0,9,134	1/1:4,4:8:2.90:106,3,0	./.	0/0:8,0:8:21.07:0,21,426	1/1:9,0:9:18.02:312,18,0	1/1:5,0:6:3.01:80,3,0	1/1:3,6:9:27.09:818,27,0	1/1:4,2:6:6.02:212,6,0	1/1:2,0:2:3.01:79,3,0	0/0:18,0:18:48.16:0,48,1124	0/0:11,0:11:24.08:0,24,567	1/1:1,2:3:6.02:212,6,0	1/1:4,3:7:11.87:333,12,0	1/1:4,1:5:9.03:262,9,0	./.	1/1:4,1:5:8.98:166,9,0	1/1:2,1:3:3.01:106,3,0	./.	0/0:4,0:4:12.04:0,12,252	./.	./.	1/1:1,2:3:6.02:213,6,0	1/1:2,4:6:18.01:551,18,0	1/1:5,3:8:12.04:369,12,0	./.
chr10	81900609	.	A	ACG	270.49	PASS	AB=0.920;AC=13;AF=0.283;AN=46;BaseQRankSum=3.083;DP=148;FS=3.778;HRun=0;HaplotypeScore=93.4055;InbreedingCoeff=0.3303;MQ=59.40;MQ0=1;MQRankSum=-4.728;QD=6.15;ReadPosRankSum=-1.533;VQSLOD=2.6889;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:53.85:0,54,852	0/0:2,0:2:1.60:0,2,4	0/0:7,0:3:3.62:0,4,21	0/0:12,0:5:5.22:0,5,49	./.	0/0:5,0:5:5.34:0,5,23	0/0:4,0:4:12.04:0,12,193	0/1:6,0:6:0.13:0,0,31	0/0:4,1:5:2.88:0,3,10	1/1:5,4:9:3.25:197,3,0	./.	0/0:3,0:3:0.01:0,0,0	0/0:12,0:12:33.10:0,33,511	0/0:11,0:11:27.09:0,27,431	1/1:2,2:4:0.47:1,0,0	0/0:1,1:2:0:0,0,0	0/1:8,1:9:6.88:55,0,7	./.	./.	0/0:3,0:3:3.40:0,3,14	1/1:3,0:3:1.72:3,2,0	0/0:1,0:1:3.01:0,3,49	0/1:1,0:1:0:0,0,0	0/1:3,0:3:0:0,0,0	0/0:2,1:3:3.63:0,4,9	1/1:1,1:2:1.73:58,2,0	0/1:4,3:7:0.08:57,0,0	./.
chr10	81900630	.	TTATA	T	2604.26	PASS	AC=26;AF=0.542;AN=48;BaseQRankSum=-2.400;DP=139;FS=24.996;HRun=0;HaplotypeScore=38.1471;InbreedingCoeff=0.6040;MQ=58.66;MQ0=1;MQRankSum=-2.881;QD=35.67;ReadPosRankSum=-0.143;VQSLOD=1.5235;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,17:22:30.10:526,30,0	1/1:0,2:2:6.02:105,6,0	0/0:11,0:3:0.08:0,0,1	0/0:20,0:5:8.10:0,8,77	0/0:1,1:2:0:0,0,0	0/0:0,0:2:5.60:0,6,25	0/0:1,0:2:2.80:0,3,13	1/1:0,18:18:51.16:854,51,0	0/0:0,0:2:5.60:0,6,25	1/1:0,5:5:15.05:262,15,0	./.	0/0:1,0:3:5.60:0,6,25	0/0:4,0:10:15.05:0,15,267	0/0:1,0:6:12.02:0,12,184	1/1:0,2:2:6.02:105,6,0	./.	1/1:3,6:9:14.79:236,15,0	1/1:1,0:1:3.01:41,3,0	1/1:0,1:1:3.01:53,3,0	1/1:0,3:3:9.03:158,9,0	1/1:0,3:3:3.01:53,3,0	0/0:0,0:2:5.81:0,6,66	./.	0/0:1,0:3:0:0,0,0	1/1:0,2:2:6.02:105,6,0	1/1:0,1:1:3.01:53,3,0	1/1:0,4:4:12.04:210,12,0	./.
chr10	81901433	.	GA	G	11692.78	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=17.682;DP=554;FS=55.804;HRun=1;HaplotypeScore=163.4522;InbreedingCoeff=0.9938;MQ=83.17;MQ0=0;MQRankSum=-9.285;QD=32.48;ReadPosRankSum=4.130;VQSLOD=-0.0237;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:99:0,114,1737	1/1:0,5:5:12.04:149,12,0	0/0:28,0:28:84.20:0,84,1239	0/0:13,0:13:39.13:0,39,586	1/1:1,23:24:48.15:587,48,0	1/1:0,16:16:45.14:556,45,0	0/0:29,0:29:84.29:0,84,1332	1/1:2,23:25:54.16:653,54,0	1/1:0,16:16:45.14:555,45,0	1/1:0,17:17:51.14:611,51,0	1/1:1,14:15:39.12:475,39,0	1/1:1,15:16:42.13:520,42,0	0/0:32,0:32:90.20:0,90,1373	0/0:25,0:25:75.19:0,75,1163	1/1:0,27:27:69.22:854,69,0	1/1:0,17:17:45.14:557,45,0	1/1:0,13:13:36.11:446,36,0	1/1:0,9:9:27.08:332,27,0	1/1:0,21:21:63.17:751,63,0	1/1:0,14:14:42.13:517,42,0	1/1:1,25:26:68.57:809,69,0	0/0:27,0:27:69.22:0,69,1061	1/1:0,14:14:42.13:515,42,0	1/1:0,12:12:30.09:364,30,0	1/1:0,10:10:30.09:369,30,0	1/1:1,30:31:90.28:1112,90,0	1/1:0,19:19:51.16:626,51,0	1/1:0,13:13:27.08:334,27,0
chr10	81902478	.	TAC	T	17444.33	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=14.948;DP=580;FS=0.000;HRun=0;HaplotypeScore=192.6032;InbreedingCoeff=0.9291;MQ=84.50;MQ0=0;MQRankSum=-13.786;QD=37.60;ReadPosRankSum=7.423;VQSLOD=4.8376;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.20:0,66,1225	1/1:0,14:14:36.12:523,36,0	0/0:22,0:22:52.06:0,52,950	0/0:32,0:32:90.31:0,90,1682	1/1:1,29:30:66.22:963,66,0	1/1:2,25:27:69.23:1008,69,0	1/1:0,21:21:57.19:830,57,0	0/0:39,0:39:99:0,108,2064	1/1:1,22:23:54.18:793,54,0	1/1:0,26:26:75.25:1101,75,0	1/1:1,20:22:60.20:874,60,0	1/1:0,12:12:36.12:529,36,0	1/1:2,18:20:51.17:749,51,0	1/1:2,26:28:60.20:876,60,0	1/1:0,20:20:57.19:837,57,0	1/1:1,16:17:48.16:705,48,0	1/1:0,7:7:18.06:264,18,0	1/1:0,5:5:12.04:176,12,0	1/1:2,11:13:30.10:441,30,0	1/1:0,27:27:75.25:1071,75,0	1/1:0,4:4:3.48:45,3,0	1/1:0,23:23:60.20:875,60,0	1/1:1,23:24:57.19:838,57,0	1/1:0,4:4:9.03:132,9,0	1/1:2,17:19:39.13:567,39,0	1/1:0,38:38:99:1673,114,0	1/1:0,33:33:90.30:1308,90,0	1/1:0,7:7:18.06:265,18,0
chr10	81903041	.	TAC	T	906.54	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.769;DP=772;FS=11.676;HRun=0;HaplotypeScore=103.6507;InbreedingCoeff=0.9953;MQ=65.71;MQ0=2;MQRankSum=-5.433;QD=21.58;ReadPosRankSum=-3.970;VQSLOD=2.6957;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:24:27.09:370,27,0	0/0:13,0:13:39.13:0,39,691	0/0:30,1:29:77.46:0,77,1264	0/0:35,0:29:45.67:0,46,861	0/0:38,0:38:99:0,105,1820	0/0:34,0:34:90.31:0,90,1588	0/0:23,0:23:60.15:0,60,1063	1/1:1,17:18:48.16:658,48,0	0/0:27,0:27:72.21:0,72,1214	0/0:39,0:39:99:0,111,1963	0/0:29,0:29:84.27:0,84,1454	0/0:21,0:21:60.21:0,60,1063	0/0:39,0:39:99:0,117,2054	0/0:27,0:27:81.28:0,81,1416	0/0:35,0:35:93.32:0,93,1650	0/0:37,0:37:99:0,105,1850	0/0:20,0:20:60.21:0,60,1054	0/0:7,0:7:18.06:0,18,319	0/0:23,0:23:66.23:0,66,1161	0/0:36,0:36:99:0,102,1779	0/0:35,0:35:99:0,102,1759	0/0:25,0:25:75.24:0,75,1300	0/0:22,0:22:60.19:0,60,1023	0/0:21,0:21:51.17:0,51,905	0/0:20,0:20:57.17:0,57,974	0/0:41,0:41:99:0,120,2108	0/0:39,0:39:99:0,105,1826	0/0:13,0:13:39.13:0,39,657
chr10	81903131	.	CT	C	2981.44	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.685;DP=651;FS=0.888;HRun=3;HaplotypeScore=67.9588;InbreedingCoeff=0.9962;MQ=87.53;MQ0=0;MQRankSum=-3.937;QD=31.72;ReadPosRankSum=2.380;VQSLOD=3.8197;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:36.03:0,36,471	0/0:6,0:6:18.06:0,18,259	0/0:25,0:25:69.21:0,69,957	0/0:22,0:22:66.21:0,66,901	0/0:44,0:44:99:0,129,1833	1/1:1,21:22:63.20:781,63,0	0/0:19,0:19:57.17:0,57,802	0/0:24,0:24:51.16:0,51,704	1/1:0,14:14:36.11:446,36,0	0/0:31,0:31:87.28:0,87,1223	0/0:29,0:29:81.27:0,81,1167	1/1:1,17:18:51.16:632,51,0	0/0:30,0:30:90.30:0,90,1293	0/0:33,0:33:99:0,99,1425	0/0:30,0:30:90.30:0,90,1294	0/0:24,0:24:69.23:0,69,994	0/0:23,0:23:60.20:0,60,864	0/0:7,0:7:18.06:0,18,259	0/0:19,0:19:54.18:0,54,777	0/0:30,0:30:90.29:0,90,1262	0/0:21,0:21:63.21:0,63,907	0/0:25,0:25:75.25:0,75,1080	1/1:2,17:19:48.15:595,48,0	1/1:1,20:21:57.18:702,57,0	0/0:24,0:24:69.20:0,69,958	0/0:27,0:27:78.26:0,78,1111	0/0:26,0:26:78.26:0,78,1123	0/0:17,0:17:45.15:0,45,645
chr10	81903188	.	G	GA	1142.56	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.262;DP=623;FS=3.292;HRun=2;HaplotypeScore=81.6893;InbreedingCoeff=0.9870;MQ=90.83;MQ0=0;MQRankSum=-8.859;QD=26.57;ReadPosRankSum=-3.233;VQSLOD=2.5195;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,14:19:14.50:382,15,0	0/0:8,0:8:21.06:0,21,249	0/0:30,0:30:86.92:0,87,1037	0/0:22,0:22:44.77:0,45,558	0/0:28,0:28:84.26:0,84,1041	0/0:24,0:24:69.20:0,69,843	0/0:20,0:20:57.18:0,57,707	1/1:4,20:24:63.18:879,63,0	0/0:16,0:16:42.12:0,42,508	0/0:35,0:35:96.28:0,96,1167	0/0:13,0:13:39.11:0,39,473	0/0:18,0:18:54.15:0,54,646	0/0:27,0:27:81.23:0,81,980	0/0:31,0:31:90.23:0,90,1066	0/0:31,0:31:84.22:0,84,1004	0/0:28,0:28:81.25:0,81,993	0/0:24,0:24:72.19:0,72,864	0/0:11,0:11:33.09:0,33,395	0/0:16,0:16:45.14:0,45,557	0/0:24,0:24:66.17:0,66,778	0/0:30,0:30:87.22:0,87,1037	0/0:22,0:22:57.16:0,57,692	0/0:13,0:13:39.12:0,39,483	0/0:10,0:10:30.08:0,30,358	0/0:17,0:17:51.14:0,51,609	0/0:32,0:32:96.30:0,96,1190	0/0:41,0:40:99:0,117,1412	0/0:9,0:9:23.75:0,24,297
chr10	81903194	.	A	ATC	1557.10	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.355;DP=624;FS=0.686;HRun=0;HaplotypeScore=95.8724;InbreedingCoeff=0.9958;MQ=93.47;MQ0=0;MQRankSum=-9.456;QD=37.07;ReadPosRankSum=-2.726;VQSLOD=4.9512;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,15:20:33.54:576,34,0	0/0:7,0:7:21.07:0,21,309	0/0:36,0:36:99:0,99,1403	0/0:21,0:21:54.16:0,54,754	0/0:33,0:33:90.26:0,90,1263	0/0:23,0:23:66.22:0,66,972	0/0:19,0:19:57.19:0,57,839	1/1:1,21:22:60.21:1102,60,0	0/0:17,0:17:42.13:0,42,599	0/0:33,0:33:90.29:0,90,1291	0/0:11,0:11:30.05:0,30,417	0/0:17,0:17:51.17:0,51,750	0/0:25,0:25:75.23:0,75,1081	0/0:31,0:31:87.27:0,87,1242	0/0:29,0:29:84.25:0,84,1197	0/0:30,0:30:87.29:0,87,1280	0/0:22,0:22:63.21:0,63,928	0/0:12,0:12:36.12:0,36,530	0/0:20,0:20:48.13:0,48,653	0/0:23,0:23:69.22:0,69,995	0/0:33,0:33:87.29:0,87,1280	0/0:19,0:19:57.19:0,57,839	0/0:14,0:14:39.13:0,39,574	0/0:9,0:9:27.09:0,27,398	0/0:17,0:17:48.14:0,48,686	0/0:33,0:33:96.31:0,96,1395	0/0:39,0:38:99:0,114,1679	0/0:9,0:9:24.08:0,24,353
chr10	81903220	.	GT	G	134.76	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.888;DP=585;FS=9.226;HRun=1;HaplotypeScore=68.0763;InbreedingCoeff=0.8558;MQ=94.06;MQ0=0;MQRankSum=-4.863;QD=6.42;ReadPosRankSum=-1.100;VQSLOD=-0.4825;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:20.94:189,21,0	0/0:5,0:5:15.05:0,15,233	0/0:35,0:35:94.24:0,94,1552	0/0:19,0:19:53.81:0,54,777	0/0:24,0:24:72.21:0,72,1094	0/0:17,0:17:51.17:0,51,815	0/0:17,0:17:48.15:0,48,733	1/1:6,3:9:1.15:52,1,0	0/0:21,0:21:57.17:0,57,886	0/0:28,0:28:84.28:0,84,1323	0/0:9,0:9:27.08:0,27,400	0/0:17,0:17:51.15:0,51,789	0/0:29,0:29:87.30:0,87,1382	0/0:24,0:24:72.25:0,72,1147	0/0:33,0:33:99:0,99,1582	0/0:28,0:28:84.29:0,84,1342	0/0:23,0:23:69.24:0,69,1100	0/0:14,0:14:42.07:0,42,612	0/0:20,0:20:57.19:0,57,898	0/0:27,0:27:75.26:0,75,1197	0/0:39,0:39:99:0,117,1822	0/0:17,0:17:51.17:0,51,811	0/0:16,0:16:48.16:0,48,764	0/0:8,0:8:24.08:0,24,384	0/0:17,0:17:51.14:0,51,768	0/0:32,0:32:93.29:0,93,1435	0/0:37,0:36:99:0,111,1759	0/0:8,0:8:21.07:0,21,335
chr10	81903445	.	A	AAAG	1356.30	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.756;DP=619;FS=25.254;HRun=0;HaplotypeScore=89.7346;InbreedingCoeff=0.9982;MQ=84.23;MQ0=0;MQRankSum=-7.855;QD=35.69;ReadPosRankSum=-2.709;VQSLOD=1.7763;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,12:13:27.09:567,27,0	0/0:8,0:8:24.05:0,24,380	0/0:19,0:19:54.14:0,54,826	0/0:20,0:20:60.16:0,60,970	0/0:31,0:31:87.28:0,87,1453	0/0:18,0:18:54.18:0,54,917	0/0:20,0:20:60.21:0,60,1023	1/1:8,17:24:45.15:911,45,0	0/0:22,0:22:66.23:0,66,1126	0/0:40,0:40:99:0,120,1950	0/0:31,0:31:90.28:0,90,1504	0/0:13,0:13:36.11:0,36,590	0/0:24,0:24:66.23:0,66,1118	0/0:24,0:24:72.25:0,72,1228	0/0:27,0:27:75.24:0,75,1232	0/0:18,0:17:54.18:0,54,921	0/0:18,0:18:51.16:0,51,844	0/0:12,0:12:33.10:0,33,535	0/0:29,0:29:84.23:0,84,1345	0/0:28,0:28:84.26:0,84,1358	0/0:22,0:22:66.23:0,66,1126	0/0:19,0:19:54.18:0,54,921	0/0:16,0:16:48.16:0,48,818	0/0:14,0:14:42.14:0,42,710	0/0:27,0:26:81.28:0,81,1381	0/0:31,0:31:87.30:0,87,1484	0/0:32,0:32:96.32:0,96,1607	0/0:18,0:18:54.14:0,54,874
chr10	81903890	.	CT	C	944.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.061;DP=741;FS=3.603;HRun=1;HaplotypeScore=77.5379;InbreedingCoeff=0.9978;MQ=80.70;MQ0=0;MQRankSum=-1.316;QD=36.31;ReadPosRankSum=-2.583;VQSLOD=2.9068;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,2105	0/0:16,0:16:48.16:0,48,755	0/0:33,0:33:99:0,99,1480	0/0:24,0:23:68.20:0,68,968	0/0:19,0:19:56.75:0,57,801	0/0:24,0:24:72.24:0,72,1138	0/0:22,0:21:63.18:0,63,956	1/1:0,26:26:78.22:1039,78,0	0/0:23,0:23:69.22:0,69,1079	0/0:25,0:25:75.25:0,75,1155	0/0:24,0:24:66.21:0,66,1019	0/0:23,0:23:69.22:0,69,1080	0/0:35,0:35:99:0,105,1650	0/0:39,0:39:99:0,117,1799	0/0:36,0:36:99:0,108,1661	0/0:26,0:26:78.26:0,78,1232	0/0:39,0:39:99:0,114,1767	0/0:25,0:25:58.27:0,58,1086	0/0:22,0:21:63.21:0,63,980	0/0:29,0:29:84.28:0,84,1307	0/0:26,0:26:75.20:0,75,1105	0/0:24,0:24:72.24:0,72,1134	0/0:22,0:22:63.20:0,63,971	0/0:30,0:30:90.29:0,90,1397	0/0:12,0:12:36.12:0,36,575	0/0:30,0:30:90.30:0,90,1418	0/0:34,0:33:99:0,99,1471	0/0:8,0:8:24.08:0,24,383
chr10	81904580	.	T	TA	1745.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-10.385;DP=550;FS=0.611;HRun=0;HaplotypeScore=51.7786;InbreedingCoeff=0.9981;MQ=79.21;MQ0=0;MQRankSum=-2.679;QD=42.58;ReadPosRankSum=-4.172;VQSLOD=2.2794;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:41.31:0,41,502	0/0:12,0:12:36.09:0,36,483	0/0:13,0:13:35.80:0,36,450	0/0:12,0:12:27.06:0,27,345	0/0:34,0:34:99:0,102,1358	0/0:22,0:22:66.22:0,66,923	0/0:14,0:14:42.11:0,42,552	1/1:1,40:41:99:1841,117,0	0/0:17,0:17:51.17:0,51,713	0/0:13,0:13:39.13:0,39,546	0/0:29,0:29:87.29:0,87,1216	0/0:16,0:16:48.14:0,48,652	0/0:26,0:26:78.25:0,78,1072	0/0:15,0:15:45.15:0,45,628	0/0:14,0:14:42.12:0,42,554	0/0:17,0:17:51.16:0,51,698	0/0:20,0:20:60.20:0,60,837	0/0:18,0:18:51.17:0,51,712	0/0:17,0:17:51.17:0,51,713	0/0:26,0:26:75.23:0,75,1015	0/0:11,0:11:33.09:0,33,443	0/0:19,0:19:54.18:0,54,755	0/0:29,0:29:81.25:0,81,1114	0/0:13,0:13:39.12:0,39,528	0/0:26,0:26:78.23:0,78,1056	0/0:21,0:21:63.20:0,63,853	0/0:27,0:27:81.26:0,81,1114	0/0:14,0:14:39.11:0,39,513
chr10	81904953	.	AT	A	3160.30	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.067;DP=570;FS=1.643;HRun=10;HaplotypeScore=76.6612;InbreedingCoeff=0.9554;MQ=70.33;MQ0=0;MQRankSum=0.064;QD=20.26;ReadPosRankSum=-0.794;VQSLOD=4.1585;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,3:29:29.02:0,29,758	0/0:8,0:8:24.01:0,24,242	0/0:14,0:12:8.53:0,9,109	0/0:16,0:14:16.54:0,17,209	0/0:28,0:28:60.10:0,60,649	1/1:0,24:24:68.99:599,69,0	1/1:2,15:17:38.98:339,39,0	1/1:6,27:33:80.95:699,81,0	1/1:4,14:18:17.61:314,18,0	0/0:24,2:27:13.91:0,14,585	0/0:30,1:31:40.11:0,40,664	1/1:3,21:24:62.98:547,63,0	0/0:20,0:20:51.12:0,51,555	0/0:12,0:13:38.94:0,39,412	0/0:19,0:19:51.13:0,51,556	0/0:21,0:21:57.15:0,57,623	0/0:11,0:11:27.07:0,27,299	0/0:17,0:17:47.12:0,47,491	0/0:19,2:21:5.07:0,5,503	0/0:27,0:27:69.65:0,70,757	0/0:8,0:8:15.02:0,15,156	0/0:12,0:12:29.94:0,30,306	1/1:4,21:25:59.98:521,60,0	1/1:2,13:15:38.99:339,39,0	0/0:16,0:16:38.70:0,39,459	0/0:27,0:27:72.19:0,72,796	0/0:28,0:28:84.21:0,84,921	0/0:20,0:20:60.16:0,60,664
chr10	81905221	.	C	CTT	10126.51	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-16.353;DP=667;FS=10.451;HRun=1;HaplotypeScore=74.7157;InbreedingCoeff=0.9947;MQ=64.63;MQ0=3;MQRankSum=2.028;QD=46.24;ReadPosRankSum=2.661;VQSLOD=3.8921;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,45:48:99:2337,123,0	0/0:4,0:4:11.99:0,12,157	0/0:34,0:28:81.26:0,81,1191	0/0:28,0:25:69.19:0,69,1008	0/0:23,0:23:69.20:0,69,1006	1/1:0,22:21:54.19:1043,54,0	1/1:0,18:18:45.11:831,45,0	1/1:1,28:26:66.21:1201,66,0	1/1:1,21:22:57.20:1101,57,0	0/0:20,0:20:57.19:0,57,855	0/0:15,0:15:45.15:0,45,688	1/1:1,22:23:51.13:985,51,0	0/0:28,0:28:84.26:0,84,1243	0/0:23,0:23:63.21:0,63,961	0/0:28,0:28:81.27:0,81,1240	0/0:21,0:21:57.18:0,57,850	0/0:23,0:23:63.17:0,63,919	0/0:21,0:21:60.20:0,60,918	0/0:17,0:17:51.16:0,51,761	0/0:25,0:25:69.15:0,69,1007	0/0:30,0:30:84.27:0,84,1260	0/0:18,0:18:51.14:0,51,737	1/1:1,20:21:51.14:948,51,0	1/1:1,35:36:87.30:1680,87,0	0/0:21,1:22:43.24:0,43,877	0/0:26,0:26:78.26:0,78,1194	0/0:32,0:32:96.30:0,96,1443	0/0:10,0:10:30.10:0,30,459
chr10	81905819	.	TTCATTC	T	3230.05	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=1.475;DP=486;FS=5.868;HRun=0;HaplotypeScore=104.3154;InbreedingCoeff=0.6802;MQ=72.81;MQ0=4;MQRankSum=0.677;QD=24.47;ReadPosRankSum=0.001;VQSLOD=3.0261;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:23.16:614,23,0	0/0:6,0:6:15.05:0,15,240	0/0:20,0:16:32.69:0,33,733	0/0:20,0:14:38.58:0,39,611	0/0:18,0:18:42.13:0,42,759	1/1:23,0:23:27.53:755,28,0	1/1:1,16:17:3.01:68,3,0	1/1:31,0:31:72.20:1035,72,0	1/1:9,0:9:3.01:37,3,0	0/0:20,0:20:53.20:0,53,919	0/0:17,0:17:51.17:0,51,823	0/1:20,0:20:26.24:653,0,26	0/0:15,0:15:39.13:0,39,652	0/0:11,0:11:30.10:0,30,679	0/0:14,0:13:36.10:0,36,578	0/0:14,0:14:32.59:0,33,541	0/0:18,0:18:43.68:0,44,791	0/0:10,0:10:30.10:0,30,592	0/0:8,0:8:24.05:0,24,350	0/0:33,0:33:91.45:0,91,1510	0/0:12,0:12:30.09:0,30,510	0/0:20,0:20:52.40:0,52,766	0/0:20,0:20:1.07:0,1,3	0/1:13,0:13:31.34:234,0,31	0/0:22,0:22:63.21:0,63,1064	0/0:23,0:23:60.15:0,60,1033	0/0:20,0:20:57.19:0,57,994	0/0:13,0:12:33.10:0,33,488
chr10	81905821	.	CAT	C	3837.50	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=4.560;DP=480;FS=62.476;HRun=0;HaplotypeScore=67.5532;InbreedingCoeff=0.4509;MQ=72.06;MQ0=4;MQRankSum=1.164;QD=16.98;ReadPosRankSum=-5.636;VQSLOD=0.7516;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:48.12:663,48,0	0/0:6,0:6:15.05:0,15,240	0/0:19,0:15:30.37:0,30,731	0/0:20,0:14:38.58:0,39,611	0/1:17,0:17:38.43:38,0,620	1/1:22,0:22:55.38:805,55,0	1/1:17,0:17:3.01:33,3,0	1/1:2,25:27:72.20:1035,72,0	1/1:1,8:9:3.01:37,3,0	0/1:19,0:19:6.57:7,0,749	0/1:18,0:18:12.78:13,0,731	1/1:21,0:21:55.81:788,56,0	0/0:16,0:16:16.13:0,16,574	0/1:12,0:12:63.37:63,0,352	0/0:16,0:15:15.17:0,15,526	0/0:13,0:13:13.31:0,13,403	0/0:19,0:19:42.60:0,43,647	0/0:10,0:10:30.10:0,30,455	0/0:8,0:8:6.60:0,7,277	0/0:31,0:31:43.45:0,43,1317	0/0:13,0:13:7.19:0,7,415	0/1:20,0:20:2.01:2,0,620	0/0:2,17:19:1.09:0,1,3	1/1:11,1:12:25.85:340,26,0	0/0:22,0:22:19.35:0,19,899	0/0:22,0:22:4.95:0,5,806	0/0:20,0:20:19.48:0,19,845	0/1:13,0:12:13.85:14,0,389
chr10	81905847	.	C	CTCTC	2203.85	PASS	AB=1.000;AC=48;AF=0.923;AN=52;BaseQRankSum=-1.685;DP=520;FS=0.000;HRun=0;HaplotypeScore=103.5234;InbreedingCoeff=0.2553;MQ=52.32;MQ0=17;MQRankSum=1.495;QD=4.66;ReadPosRankSum=-1.495;VQSLOD=1.7299;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:22:3.01:49,3,0	./.	1/1:16,0:8:0.47:1,0,0	./.	1/1:21,0:21:9:90,9,0	1/1:21,0:20:3:47,3,0	0/0:14,0:14:0.89:0,1,3	1/1:18,0:16:0.94:3,1,0	0/1:13,0:13:0:0,0,0	1/1:28,0:27:13.29:132,13,0	1/1:19,0:19:5.93:91,6,0	1/1:19,0:19:9.03:139,9,0	1/1:21,0:20:6.18:55,6,0	1/1:13,0:13:24.04:318,24,0	1/1:19,0:18:2.98:24,3,0	1/1:10,0:10:6.02:100,6,0	1/1:22,4:27:7.34:87,7,0	1/1:17,0:17:8.72:59,9,0	1/1:8,0:8:3.01:56,3,0	1/1:25,0:25:5.80:100,6,0	1/1:14,0:13:6.01:72,6,0	1/1:27,0:27:9.49:146,9,0	0/1:19,0:19:0.47:0,0,1	1/1:13,0:13:5.52:55,6,0	1/1:23,0:22:9.02:128,9,0	1/1:25,0:25:26.20:296,26,0	1/1:21,0:21:9.96:133,10,0	1/1:13,0:11:9.08:103,9,0
chr10	81906452	.	A	ATCTC	1738.47	PASS	AB=0.903;AC=39;AF=0.750;AN=52;BaseQRankSum=-0.576;DP=687;FS=0.000;HRun=0;HaplotypeScore=157.8654;InbreedingCoeff=0.1544;MQ=74.68;MQ0=26;MQRankSum=-0.189;QD=3.70;ReadPosRankSum=-1.044;VQSLOD=2.4019;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:27:10.78:90,11,0	1/1:13,0:13:8.62:113,9,0	./.	./.	0/1:22,0:22:34.56:47,0,35	1/1:22,0:22:10.42:119,10,0	0/0:23,0:24:2.62:0,3,113	1/1:43,0:43:5.50:35,5,0	0/1:13,1:14:37.69:97,0,38	1/1:17,0:17:8.06:102,8,0	0/0:23,0:23:3.95:0,4,47	0/1:14,6:22:34.11:198,0,34	0/1:13,0:13:3.87:4,0,130	0/0:21,0:21:7.89:0,8,260	1/1:25,0:23:14.75:233,15,0	1/1:12,0:12:1.05:2,1,0	1/1:19,0:19:11.98:139,12,0	1/1:11,0:9:8.52:102,9,0	0/1:19,0:19:6.70:31,0,7	1/1:21,0:24:2.74:12,3,0	1/1:21,0:20:14.95:135,15,0	0/1:20,0:20:5.44:5,0,210	1/1:14,3:21:2.86:70,3,0	1/1:17,1:18:11.29:130,11,0	1/1:20,0:24:0.34:0,0,0	1/1:15,0:18:13.36:58,13,0	0/1:17,7:27:3.39:134,0,3	1/1:14,0:14:3:25,3,0
chr10	81906655	.	TTTC	T	2439.34	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.227;DP=623;FS=8.210;HRun=0;HaplotypeScore=108.8385;InbreedingCoeff=0.9975;MQ=64.43;MQ0=1;MQRankSum=-0.286;QD=12.64;ReadPosRankSum=0.921;VQSLOD=2.4931;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:34:72.19:1210,72,0	0/0:12,0:12:36.10:0,36,677	0/0:31,0:22:63.15:0,63,1227	0/0:24,0:20:51.92:0,52,945	0/0:25,0:25:75.26:0,75,1627	1/1:19,0:18:39.99:160,40,0	1/1:17,0:17:39.31:156,39,0	1/1:34,0:34:70.68:298,71,0	1/1:18,0:17:42.85:172,43,0	0/0:28,0:28:84.27:0,84,1691	0/0:28,0:28:78.21:0,78,1610	1/1:21,1:22:45.86:222,46,0	0/0:23,0:23:69.24:0,69,1485	0/0:6,0:6:18.06:0,18,390	0/0:22,0:22:63.19:0,63,1290	0/0:24,0:24:57.17:0,57,1197	0/0:35,0:35:99:0,102,2080	0/0:16,0:16:24.73:0,25,901	0/0:15,0:15:45.15:0,45,955	0/0:35,0:35:99:0,99,2096	0/0:10,0:10:30.09:0,30,611	0/0:17,0:17:51.18:0,51,1107	1/1:28,0:28:58.92:237,59,0	1/1:21,0:21:48.21:193,48,0	0/0:18,0:18:54.19:0,54,1161	0/0:24,0:24:72.25:0,72,1564	0/0:30,0:30:87.26:0,87,1778	0/0:7,0:7:21.07:0,21,456
chr10	81906656	.	TTC	T	6497.14	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.596;DP=627;FS=12.313;HRun=0;HaplotypeScore=82.9051;InbreedingCoeff=0.9978;MQ=63.59;MQ0=1;MQRankSum=1.585;QD=33.49;ReadPosRankSum=0.810;VQSLOD=6.5483;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:74.64:569,75,0	0/0:12,0:12:36.08:0,36,550	0/0:31,0:22:63.14:0,63,1023	0/0:23,0:19:51.58:0,52,777	0/0:25,0:25:75.26:0,75,1321	1/1:0,19:19:45.15:678,45,0	1/1:0,17:17:45.15:674,45,0	1/1:3,31:34:92.73:1287,93,0	1/1:1,17:17:48.16:726,48,0	0/0:29,0:29:87.27:0,87,1411	0/0:27,0:27:74.51:0,75,1274	1/1:1,21:22:51.15:749,51,0	0/0:23,0:23:69.24:0,69,1203	0/0:6,0:6:18.06:0,18,316	0/0:22,0:22:63.18:0,63,1041	0/0:23,0:23:57.16:0,57,977	0/0:35,0:35:99:0,102,1677	0/0:16,0:16:33.25:0,33,741	0/0:18,0:18:54.16:0,54,852	0/0:35,0:35:99:0,99,1705	0/0:10,0:10:30.09:0,30,501	0/0:17,0:17:51.17:0,51,898	1/1:1,27:28:66.22:998,66,0	1/1:0,21:21:54.18:817,54,0	0/0:19,0:19:57.18:0,57,966	0/0:24,0:24:72.25:0,72,1269	0/0:31,0:31:90.24:0,90,1470	0/0:7,0:7:21.07:0,21,370
chr10	81906891	.	A	AG	7736.28	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-15.156;DP=599;FS=16.928;HRun=0;HaplotypeScore=51.5889;InbreedingCoeff=0.9992;MQ=86.72;MQ0=0;MQRankSum=-2.282;QD=43.71;ReadPosRankSum=-1.285;VQSLOD=2.7789;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:75.26:1199,75,0	0/0:13,0:13:39.13:0,39,546	0/0:23,0:23:60.14:0,60,779	0/0:16,0:16:30.08:0,30,381	0/0:23,0:23:63.21:0,63,881	1/1:1,24:25:66.23:1055,66,0	1/1:0,17:17:48.16:768,48,0	1/1:0,38:38:99:1742,114,0	1/1:0,12:12:30.10:480,30,0	0/0:27,0:27:78.26:0,78,1088	0/0:16,0:16:48.16:0,48,669	1/1:1,21:22:63.21:1007,63,0	0/0:29,0:29:84.28:0,84,1172	0/0:26,0:26:75.25:0,75,1049	0/0:31,0:31:93.30:0,93,1283	0/0:21,0:21:63.21:0,63,880	0/0:13,0:13:39.13:0,39,545	0/0:10,0:10:30.10:0,30,420	0/0:16,0:16:48.16:0,48,672	0/0:24,0:24:69.22:0,69,948	0/0:28,0:28:81.25:0,81,1113	0/0:25,0:25:72.24:0,72,1007	1/1:0,23:23:66.23:1055,66,0	1/1:0,11:11:27.09:432,27,0	0/0:19,0:19:57.19:0,57,796	0/0:25,0:25:75.25:0,75,1049	0/0:28,0:28:84.27:0,84,1158	0/0:9,0:9:24.08:0,24,336
chr10	81907388	.	G	GGA	165.28	PASS	AB=0.994;AC=30;AF=0.682;AN=44;BaseQRankSum=0.320;DP=445;FS=8.038;HRun=0;HaplotypeScore=93.6533;InbreedingCoeff=0.3622;MQ=57.36;MQ0=14;MQRankSum=-1.239;QD=0.57;ReadPosRankSum=-1.159;VQSLOD=0.8441;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:7,0:7:5.99:49,6,0	0/1:16,0:7:0:0,0,0	./.	./.	./.	0/1:22,0:19:0:0,0,0	1/1:44,0:42:10.27:22,10,0	0/1:8,0:8:0:0,0,0	1/1:8,1:9:4.85:52,5,0	0/1:14,0:13:0:0,0,0	1/1:10,0:10:1.55:4,2,0	1/1:14,3:17:3.01:44,3,0	1/1:20,0:18:3.58:10,4,0	0/0:15,0:15:3.01:0,3,32	1/1:12,0:12:0.89:2,1,0	1/1:18,0:18:0.47:1,0,0	1/1:10,0:10:0.92:17,1,0	0/0:19,0:19:1.19:0,1,11	1/1:16,0:14:0.47:1,0,0	0/0:16,0:15:3.25:0,3,33	0/1:27,1:27:0:0,0,0	./.	./.	1/1:13,0:13:2.68:11,3,0	1/1:18,0:18:10.88:50,11,0	0/0:10,0:10:2.68:0,3,32	0/1:8,0:7:0:0,0,0
chr10	81907432	.	AAT	A	766.95	PASS	AB=0.768;AC=31;AF=0.596;AN=52;BaseQRankSum=2.394;DP=235;FS=9.123;HRun=0;HaplotypeScore=43.0948;InbreedingCoeff=0.1681;MQ=45.09;MQ0=25;MQRankSum=0.562;QD=3.82;ReadPosRankSum=0.316;VQSLOD=0.3955;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:1,8:8:0.17:0,0,0	1/1:3,0:3:5.65:31,6,0	./.	0/0:5,0:2:5.95:0,6,57	1/1:10,1:10:3.01:46,3,0	0/1:1,9:10:0:0,0,0	1/1:2,20:19:0.52:31,1,0	1/1:11,0:8:16.83:53,17,0	1/1:0,4:4:3.01:36,3,0	0/0:5,0:5:8.21:0,8,89	0/0:4,1:4:3.01:0,3,52	./.	0/1:5,0:5:20.28:46,0,20	1/1:15,1:12:3.54:105,4,0	0/0:4,0:4:6:0,6,54	1/1:5,0:2:3.01:47,3,0	0/1:12,1:10:24.86:33,0,25	0/1:7,1:8:20.35:149,0,20	0/1:8,4:8:88.98:126,0,89	1/1:7,0:5:2.22:7,2,0	1/1:16,0:15:2.71:41,3,0	0/1:9,0:8:0.01:0,0,0	0/1:2,4:4:0:0,0,0	1/1:3,11:12:0.94:3,1,0	1/1:6,3:7:5.84:20,6,0	0/1:6,5:10:99:132,0,145	0/0:7,0:6:10.07:0,10,125	0/0:3,0:2:6.02:0,6,95
chr10	81907434	.	T	TGA	60.81	PASS	AB=1.000;AC=12;AF=0.300;AN=40;BaseQRankSum=0.296;DP=244;FS=0.000;HRun=0;HaplotypeScore=52.6405;InbreedingCoeff=0.3716;MQ=45.89;MQ0=26;MQRankSum=-2.464;QD=0.65;ReadPosRankSum=-1.479;VQSLOD=1.2276;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:8:0:0,0,0	./.	./.	0/0:6,0:2:2.99:0,3,32	0/0:11,0:10:0:0,0,0	./.	0/1:21,0:18:0.01:0,0,0	1/1:14,0:10:3:27,3,0	1/1:5,0:5:2.97:20,3,0	1/1:8,0:8:5.99:66,6,0	0/0:6,0:5:2.81:0,3,33	./.	0/0:5,0:5:0.47:0,0,1	0/0:9,0:11:2.82:0,3,14	0/0:5,0:5:6:0,6,58	./.	1/1:8,4:11:3.48:46,3,0	0/0:7,0:8:3.73:0,4,16	./.	./.	0/1:16,0:16:0:0,0,0	0/1:8,0:7:0.01:0,0,0	0/0:6,0:4:0:0,0,0	./.	0/0:8,0:6:2.04:0,2,6	0/0:11,0:10:5.81:0,6,67	0/0:9,0:8:3:0,3,34	0/0:4,0:2:6.02:0,6,67
chr10	81907638	.	CGGGG	C	2695.82	PASS	AB=0.632;AC=11;AF=0.196;AN=56;BaseQRankSum=0.339;DP=303;FS=3.431;HRun=12;HaplotypeScore=60.4071;InbreedingCoeff=0.7136;MQ=72.64;MQ0=1;MQRankSum=-2.048;QD=23.44;ReadPosRankSum=7.413;VQSLOD=1.3248;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:23:10.21:32,10,0	0/0:1,0:1:2.97:0,3,20	0/0:13,0:9:14.72:0,15,136	0/0:16,0:14:14.32:0,14,184	0/0:5,0:5:14.98:0,15,243	1/1:3,12:14:33.10:499,33,0	0/0:7,0:15:30.01:0,30,368	0/0:8,0:8:9.92:0,10,220	1/1:2,9:11:27.07:408,27,0	0/0:5,0:7:13.86:0,14,239	0/0:5,0:5:2.22:0,2,7	1/1:3,21:24:60.18:907,60,0	0/0:5,0:10:20.90:0,21,254	0/0:10,0:17:32.96:0,33,348	0/0:7,0:7:18.05:0,18,371	0/0:6,0:7:21.06:0,21,355	0/0:15,0:16:33.06:0,33,522	0/0:7,0:7:19.62:0,20,340	0/0:5,0:6:12.04:0,12,274	0/0:5,0:5:6:0,6,52	0/0:5,0:5:4.26:0,4,48	0/0:8,0:9:14.56:0,15,119	0/1:5,7:12:16.34:251,0,16	1/1:8,22:30:51.03:771,51,0	0/0:11,0:10:14.29:0,14,261	0/0:4,0:5:15.04:0,15,252	0/0:6,0:6:9.03:0,9,212	0/0:3,0:4:9.50:0,9,108
chr10	81908273	.	CTGTT	C	1486.05	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.013;DP=693;FS=0.675;HRun=0;HaplotypeScore=110.8307;InbreedingCoeff=0.9983;MQ=82.16;MQ0=0;MQRankSum=-2.930;QD=34.56;ReadPosRankSum=1.570;VQSLOD=3.6847;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,29:32:66.23:1178,66,0	0/0:10,0:10:27.08:0,27,650	0/0:30,0:30:69.22:0,69,1610	0/0:30,0:29:45.45:0,45,1593	0/0:37,0:37:99:0,105,2580	0/0:17,0:17:51.18:0,51,1298	1/1:0,11:11:24.08:429,24,0	0/0:38,0:38:90.30:0,90,2179	0/0:19,0:19:57.19:0,57,1430	0/0:27,0:27:72.24:0,72,1781	0/0:25,0:25:63.19:0,63,1531	0/0:24,0:24:69.23:0,69,1712	0/0:20,0:20:54.11:0,54,1255	0/0:21,0:21:60.19:0,60,1443	0/0:25,0:25:69.24:0,69,1761	0/0:26,0:26:75.25:0,75,1894	0/0:30,0:30:81.21:0,81,1885	0/0:12,0:12:33.11:0,33,830	0/0:19,0:19:57.13:0,57,1290	0/0:36,0:36:99:0,102,2644	0/0:37,0:37:99:0,99,2277	0/0:21,0:21:60.19:0,60,1428	0/0:26,0:26:75.25:0,75,1817	0/0:17,0:17:48.14:0,48,1049	0/0:23,0:23:57.19:0,57,1422	0/0:28,0:28:72.23:0,72,1719	0/0:35,0:35:96.29:0,96,2276	0/0:17,0:17:42.14:0,42,1091
chr10	81909293	.	A	AT	3537.75	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-12.951;DP=656;FS=1.241;HRun=9;HaplotypeScore=64.5084;InbreedingCoeff=0.9782;MQ=81.95;MQ0=0;MQRankSum=-1.505;QD=22.53;ReadPosRankSum=1.130;VQSLOD=4.5804;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:29:63.17:697,63,0	0/0:11,0:11:32.99:0,33,287	0/0:15,0:15:32.92:0,33,277	0/0:20,0:20:43.87:0,44,339	0/0:34,1:35:56.77:0,57,718	1/1:5,26:31:20.08:678,20,0	1/1:2,15:18:18.90:420,19,0	0/0:47,0:47:99:0,132,1129	1/1:2,18:21:30.94:552,31,0	0/0:30,0:30:80.97:0,81,703	0/0:26,0:26:71.98:0,72,625	1/1:3,16:19:39.11:431,39,0	0/0:22,0:22:59.98:0,60,521	0/0:30,0:30:67.22:0,67,596	0/0:20,0:20:59.99:0,60,521	0/0:23,0:23:50.98:0,51,442	0/0:22,0:22:62.99:0,63,547	0/0:4,0:4:8.95:0,9,71	0/0:19,0:19:44.96:0,45,384	0/0:26,0:26:71.98:0,72,625	0/0:13,0:13:32.99:0,33,287	0/0:26,0:26:65.95:0,66,573	1/1:4,17:21:30.73:421,31,0	1/1:3,15:18:10.04:339,10,0	0/0:24,0:24:50.93:0,51,437	0/0:30,0:30:71.98:0,72,625	0/0:35,0:35:98.96:0,99,856	0/0:21,0:21:53.97:0,54,469
chr10	81909720	.	G	GTCTCCA	6674.95	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-5.593;DP=759;FS=16.173;HRun=0;HaplotypeScore=154.8503;InbreedingCoeff=0.9103;MQ=70.44;MQ0=1;MQRankSum=-13.058;QD=28.16;ReadPosRankSum=-2.723;VQSLOD=3.2150;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,23:43:36.12:994,36,0	0/0:10,0:10:24.08:0,24,483	0/0:28,0:24:37.18:0,37,468	0/1:35,0:32:7.83:8,0,465	0/0:33,0:33:87.28:0,87,1745	1/1:5,18:26:39.13:1191,39,0	1/1:12,23:36:48.16:1433,48,0	0/0:30,0:30:48.16:0,48,995	1/1:5,18:23:32.23:1229,32,0	0/0:29,0:29:57.19:0,57,1150	0/0:26,0:26:57.20:0,57,1188	1/1:5,17:25:23.98:791,24,0	0/0:28,0:28:69.24:0,69,1416	0/0:22,0:22:42.14:0,42,869	0/0:41,0:41:75.26:0,75,1581	0/0:28,0:28:63.22:0,63,1303	0/0:22,0:22:48.15:0,48,923	0/0:11,0:10:10.24:0,10,488	0/0:22,0:22:42.14:0,42,827	0/0:24,0:24:48.14:0,48,921	0/0:28,0:28:63.22:0,63,1240	0/0:26,0:26:57.20:0,57,1186	1/1:6,15:21:19.31:538,19,0	1/1:14,13:28:18.02:490,18,0	0/0:27,0:27:72.21:0,72,1402	0/0:30,0:30:69.24:0,69,1449	0/0:37,0:37:75.26:0,75,1532	0/0:20,0:20:36.12:0,36,759
chr10	81912649	.	G	GA	1960.34	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-11.343;DP=606;FS=4.363;HRun=9;HaplotypeScore=76.4228;InbreedingCoeff=0.9636;MQ=82.01;MQ0=0;MQRankSum=-3.160;QD=22.79;ReadPosRankSum=-3.798;VQSLOD=2.9476;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,30:37:90.24:996,90,0	0/0:11,0:11:23.99:0,24,208	0/0:21,0:21:40.99:0,41,343	0/0:18,0:19:8.53:0,9,191	0/0:24,0:24:62.97:0,63,547	0/0:29,0:29:65.95:0,66,573	1/1:6,7:13:20.89:213,21,0	1/1:8,28:36:61.16:893,61,0	0/0:18,0:18:41.99:0,42,365	0/0:24,0:24:65.96:0,66,569	0/0:27,0:27:68.95:0,69,599	0/0:17,0:17:44.99:0,45,391	0/0:17,0:17:44.98:0,45,391	0/0:20,0:20:53.99:0,54,469	0/0:23,0:23:53.96:0,54,465	0/0:17,1:18:14.79:0,15,353	0/0:21,0:21:50.96:0,51,437	0/0:17,0:17:45.46:0,45,391	0/0:24,0:24:62.95:0,63,541	0/0:36,1:37:59.75:0,60,744	0/0:10,0:10:29.97:0,30,255	0/0:14,0:14:41.99:0,42,365	0/0:30,0:30:16.28:0,16,471	0/0:13,0:13:32.98:0,33,287	0/0:25,0:25:65.93:0,66,562	0/0:29,0:29:68.97:0,69,599	0/0:23,0:23:47.96:0,48,413	0/0:9,0:9:20.99:0,21,182
chr10	81913870	.	AT	A	757.63	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.553;DP=593;FS=8.047;HRun=9;HaplotypeScore=54.5536;InbreedingCoeff=0.9468;MQ=76.68;MQ0=0;MQRankSum=-1.727;QD=19.43;ReadPosRankSum=0.864;VQSLOD=3.7475;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:72.04:659,72,0	0/0:14,1:15:11.65:0,12,387	0/0:15,0:15:38.86:0,39,403	0/0:11,0:11:7.97:0,8,180	0/0:29,0:29:75.21:0,75,856	0/0:22,0:22:60.18:0,60,692	1/1:2,8:10:24.01:220,24,0	0/0:20,0:20:54.16:0,54,622	0/0:24,0:24:63.19:0,63,727	0/0:22,0:22:54.16:0,54,616	0/0:28,0:28:81.21:0,81,914	0/0:17,0:17:51.15:0,51,588	0/0:20,0:20:54.11:0,54,599	0/0:21,0:21:63.19:0,63,727	0/0:18,0:18:51.15:0,51,588	0/0:20,0:20:54.16:0,54,623	0/0:27,0:27:69.20:0,69,796	0/0:22,0:22:57.17:0,57,658	0/0:22,0:22:60.18:0,60,692	0/0:28,0:28:81.24:0,81,935	0/0:14,0:14:33.10:0,33,381	0/0:23,0:23:66.18:0,66,752	0/0:29,0:29:81.22:0,81,917	0/0:13,0:13:36.11:0,36,415	0/0:26,0:26:75.22:0,75,866	0/0:25,0:25:69.20:0,69,795	0/0:30,0:30:84.23:0,84,958	0/0:13,0:13:39.12:0,39,450
chr10	81914336	.	G	GA	2218.56	PASS	AB=0.839;AC=14;AF=0.250;AN=56;BaseQRankSum=3.660;DP=669;FS=5.758;HRun=12;HaplotypeScore=87.0008;InbreedingCoeff=0.5541;MQ=73.30;MQ0=1;MQRankSum=-0.018;QD=9.28;ReadPosRankSum=-0.017;VQSLOD=2.9140;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:24:38.73:350,39,0	0/0:8,0:8:20.88:0,21,153	0/0:11,0:12:11.16:0,11,90	0/0:20,0:20:0.86:0,1,151	0/1:19,2:23:8.69:9,0,245	1/1:6,31:38:22.14:525,22,0	0/0:1,0:19:32.58:0,33,96	0/0:24,1:26:35.49:0,35,414	0/1:6,17:24:25.81:239,0,26	0/0:27,0:30:61.59:0,62,444	0/0:23,1:25:40.69:0,41,290	1/1:7,28:35:32.36:585,32,0	0/0:28,0:32:64.28:0,64,522	0/0:30,0:30:50.34:0,50,370	0/1:24,2:26:2.74:3,0,300	0/0:27,0:28:49.60:0,50,356	0/0:41,0:42:91.19:0,91,662	0/0:16,1:17:3.40:0,3,189	0/0:20,0:20:35.12:0,35,248	0/0:25,1:26:1.68:0,2,294	0/0:16,0:17:40.77:0,41,289	0/0:17,0:19:14.80:0,15,261	1/1:6,14:21:36.79:327,37,0	1/1:0,17:18:35.89:335,36,0	0/1:27,2:29:24.39:24,0,273	0/0:18,0:20:39.65:0,40,267	0/0:23,0:23:12.78:0,13,254	0/0:15,0:15:29.71:0,30,218
chr10	81915157	.	AG	A	576.42	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.213;DP=678;FS=0.000;HRun=1;HaplotypeScore=61.0377;InbreedingCoeff=0.9977;MQ=83.85;MQ0=0;MQRankSum=-2.401;QD=28.82;ReadPosRankSum=-0.193;VQSLOD=3.1444;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:48.16:671,48,0	0/0:8,0:8:24.08:0,24,384	0/0:19,0:19:54.16:0,54,819	0/0:22,0:22:54.15:0,54,821	0/0:40,0:40:99:0,120,1918	0/0:30,0:30:90.29:0,90,1414	0/0:16,0:16:48.15:0,48,744	0/0:27,0:27:81.28:0,81,1293	0/0:22,0:22:66.23:0,66,1055	0/0:37,0:37:99:0,111,1775	0/0:29,0:29:87.27:0,87,1340	0/0:24,0:24:72.25:0,72,1148	0/0:33,0:33:99:0,99,1560	0/0:24,0:24:72.24:0,72,1127	0/0:20,0:20:60.20:0,60,954	0/0:16,0:16:48.16:0,48,763	0/0:24,0:24:72.25:0,72,1150	0/0:19,0:19:54.18:0,54,862	0/0:20,0:20:57.19:0,57,910	0/0:43,0:43:99:0,129,2035	0/0:12,0:12:36.12:0,36,576	0/0:33,0:33:99:0,99,1583	0/0:28,0:28:84.29:0,84,1343	0/0:14,0:14:42.14:0,42,671	0/0:26,0:25:78.24:0,78,1202	0/0:26,0:26:78.27:0,78,1247	0/0:34,0:34:99:0,99,1580	0/0:12,0:12:36.12:0,36,575
chr10	81915688	.	T	TA	375.47	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.614;DP=599;FS=0.997;HRun=1;HaplotypeScore=65.2165;InbreedingCoeff=0.9993;MQ=97.88;MQ0=0;MQRankSum=-6.475;QD=22.09;ReadPosRankSum=-1.459;VQSLOD=3.2970;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.29:0,93,1278	0/0:18,0:18:54.18:0,54,753	0/0:30,0:30:84.25:0,84,1103	0/0:31,0:31:84.13:0,84,1042	0/0:17,0:17:48.15:0,48,655	0/0:30,0:30:90.30:0,90,1258	0/0:22,0:22:66.21:0,66,905	1/1:2,15:17:45.11:470,45,0	0/0:25,0:25:72.21:0,72,970	0/0:18,0:18:51.17:0,51,712	0/0:15,0:15:42.14:0,42,587	0/0:23,0:23:69.23:0,69,956	0/0:27,0:27:81.27:0,81,1133	0/0:16,0:16:48.16:0,48,668	0/0:25,0:25:72.24:0,72,1007	0/0:11,0:11:30.10:0,30,420	0/0:24,0:24:72.24:0,72,1005	0/0:18,0:18:54.18:0,54,754	0/0:22,0:22:57.18:0,57,780	0/0:16,0:16:45.15:0,45,628	0/0:26,0:26:75.23:0,75,1029	0/0:20,0:20:57.19:0,57,797	0/0:26,0:26:72.23:0,72,989	0/0:14,0:14:42.14:0,42,587	0/0:25,0:25:72.23:0,72,989	0/0:15,0:14:45.15:0,45,629	0/0:21,0:20:60.20:0,60,826	0/0:16,0:16:48.16:0,48,671
chr10	81915689	.	C	CCTAG	889.47	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.541;DP=599;FS=1.003;HRun=0;HaplotypeScore=101.5707;InbreedingCoeff=0.9996;MQ=97.33;MQ0=0;MQRankSum=-6.509;QD=52.32;ReadPosRankSum=-1.290;VQSLOD=4.2779;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.31:0,90,1796	0/0:18,0:18:54.19:0,54,1064	0/0:29,0:29:78.26:0,78,1496	0/0:31,0:31:72.17:0,72,1302	0/0:17,0:17:45.15:0,45,898	0/0:31,0:31:90.31:0,90,1797	0/0:22,0:22:63.22:0,63,1257	1/1:2,15:17:45.15:984,45,0	0/0:24,0:24:69.22:0,69,1341	0/0:17,0:17:51.18:0,51,1018	0/0:16,0:16:42.13:0,42,804	0/0:23,0:23:69.24:0,69,1376	0/0:27,0:27:81.28:0,81,1618	0/0:17,0:17:48.16:0,48,954	0/0:26,0:26:75.24:0,75,1462	0/0:11,0:11:33.10:0,33,623	0/0:24,0:24:72.25:0,72,1401	0/0:18,0:18:54.19:0,54,1078	0/0:21,0:21:63.18:0,63,1177	0/0:16,0:16:45.15:0,45,876	0/0:26,0:26:72.22:0,72,1367	0/0:20,0:20:60.20:0,60,1165	0/0:26,0:26:72.25:0,72,1411	0/0:14,0:14:42.14:0,42,834	0/0:25,0:25:69.22:0,69,1320	0/0:15,0:14:45.15:0,45,899	0/0:21,0:20:60.21:0,60,1173	0/0:16,0:16:48.16:0,48,959
chr10	81915692	.	C	CA	994.83	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.156;DP=612;FS=1.668;HRun=1;HaplotypeScore=68.9442;InbreedingCoeff=0.9997;MQ=95.47;MQ0=0;MQRankSum=-7.262;QD=39.79;ReadPosRankSum=-3.044;VQSLOD=3.0687;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.30:0,93,1284	0/0:18,0:18:54.18:0,54,753	0/0:29,0:29:81.22:0,81,1050	0/0:28,0:29:63.13:0,63,807	0/0:19,0:19:51.16:0,51,694	0/0:33,0:33:96.29:0,96,1304	0/0:23,0:23:69.21:0,69,929	1/1:10,15:25:75.23:1090,75,0	0/0:23,0:23:69.22:0,69,947	0/0:17,0:17:51.17:0,51,713	0/0:16,0:16:39.13:0,39,545	0/0:23,0:23:69.23:0,69,964	0/0:28,0:28:84.27:0,84,1156	0/0:18,0:18:51.16:0,51,695	0/0:27,0:27:78.26:0,78,1089	0/0:12,0:12:36.11:0,36,487	0/0:23,0:23:69.21:0,69,947	0/0:19,0:19:57.14:0,57,770	0/0:20,0:20:57.15:0,57,775	0/0:17,0:17:42.13:0,42,570	0/0:24,0:24:66.22:0,66,923	0/0:20,0:20:60.17:0,60,818	0/0:26,0:26:69.22:0,69,949	0/0:16,0:16:45.10:0,45,589	0/0:21,0:21:60.20:0,60,839	0/0:17,0:16:45.15:0,45,630	0/0:22,0:21:63.21:0,63,873	0/0:16,0:16:48.16:0,48,671
chr10	81916027	.	CA	C	4209.36	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=15.247;DP=729;FS=4.943;HRun=2;HaplotypeScore=93.1708;InbreedingCoeff=0.9998;MQ=83.26;MQ0=0;MQRankSum=-0.851;QD=31.41;ReadPosRankSum=3.638;VQSLOD=3.4319;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,1456	0/0:19,0:19:57.19:0,57,850	0/0:22,0:22:62.89:0,63,833	0/0:25,0:25:68.39:0,68,882	0/0:28,0:28:84.28:0,84,1233	1/1:1,28:29:78.22:889,78,0	0/0:28,0:28:84.22:0,84,1189	0/0:30,0:30:87.25:0,87,1262	1/1:0,25:25:72.21:821,72,0	0/0:22,0:22:63.21:0,63,933	0/0:22,0:22:63.21:0,63,943	1/1:1,24:25:72.21:821,72,0	0/0:27,0:27:81.27:0,81,1211	0/0:26,0:26:78.25:0,78,1140	0/0:36,0:36:99:0,108,1568	0/0:26,0:26:75.25:0,75,1123	0/0:19,0:19:54.18:0,54,802	0/0:10,0:10:30.08:0,30,425	0/0:20,0:20:54.15:0,54,746	0/0:27,0:27:78.22:0,78,1081	0/0:38,0:38:99:0,108,1557	0/0:30,0:30:84.28:0,84,1258	1/1:3,29:33:87.25:993,87,0	1/1:0,22:22:60.17:684,60,0	0/0:29,0:29:84.26:0,84,1217	0/0:30,0:30:90.26:0,90,1307	0/0:33,0:33:99:0,99,1449	0/0:11,0:11:33.05:0,33,447
chr10	81917290	.	A	ACCATCC	4311.96	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.828;DP=405;FS=22.220;HRun=0;HaplotypeScore=80.7134;InbreedingCoeff=0.9075;MQ=72.96;MQ0=0;MQRankSum=-7.927;QD=78.40;ReadPosRankSum=-4.903;VQSLOD=2.4215;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,8:14:24.08:801,24,0	0/0:5,0:5:12.04:0,12,274	0/0:8,0:8:24.08:0,24,539	0/0:6,0:6:15.05:0,15,322	0/0:29,0:29:81.28:0,81,1849	0/0:19,0:19:54.19:0,54,1205	0/0:7,0:7:21.07:0,21,470	1/1:17,21:41:99:3511,111,0	0/0:9,0:9:21.07:0,21,480	0/0:24,0:24:63.19:0,63,1330	0/0:11,0:11:33.11:0,33,703	0/0:9,0:9:24.08:0,24,548	0/0:13,0:13:36.11:0,36,779	0/0:15,0:15:42.14:0,42,958	0/0:11,0:11:33.10:0,33,710	0/0:11,0:11:30.10:0,30,685	0/0:7,0:7:21.07:0,21,474	0/0:26,0:26:66.18:0,66,1418	0/0:18,0:18:48.16:0,48,1055	0/0:26,0:26:66.23:0,66,1504	0/0:8,0:8:18.06:0,18,411	0/0:12,0:12:33.11:0,33,728	0/0:9,0:9:21.07:0,21,454	0/0:3,0:3:9.03:0,9,206	0/0:15,0:15:45.15:0,45,1028	0/0:23,0:23:66.22:0,66,1448	0/0:23,0:23:60.21:0,60,1336	0/0:3,0:3:9.03:0,9,206
chr10	81917932	.	CA	C	603.59	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.007;DP=523;FS=0.800;HRun=6;HaplotypeScore=51.6751;InbreedingCoeff=0.8833;MQ=78.30;MQ0=0;MQRankSum=-0.399;QD=24.14;ReadPosRankSum=-4.321;VQSLOD=1.4060;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:54.17:0,54,702	0/0:8,0:8:24.08:0,24,315	0/0:20,0:20:57.10:0,57,638	0/0:14,0:14:27.95:0,28,339	0/0:24,0:24:69.21:0,69,881	0/0:21,0:19:54.15:0,54,693	0/0:16,0:16:45.13:0,45,564	1/1:3,22:25:66.14:698,66,0	0/0:13,0:13:39.10:0,39,472	0/0:26,0:26:72.23:0,72,943	0/0:18,0:18:45.11:0,45,559	0/0:10,0:10:30.10:0,30,395	0/0:19,0:20:57.18:0,57,741	0/0:10,0:10:30.10:0,30,395	0/0:19,0:19:57.16:0,57,722	0/0:22,0:22:60.18:0,60,774	0/0:32,0:32:91.15:0,91,1168	0/0:27,0:27:66.21:0,66,866	0/0:21,0:21:63.19:0,63,803	0/0:22,0:22:60.20:0,60,789	0/0:15,0:15:45.14:0,45,578	0/0:19,0:19:54.17:0,54,697	0/0:10,0:10:30.09:0,30,377	0/0:4,0:4:5.01:0,5,77	0/0:28,0:28:72.20:0,72,916	0/0:28,0:28:81.25:0,81,1036	0/0:19,0:19:57.16:0,57,719	0/0:8,0:8:24.08:0,24,316
chr10	81918489	.	AC	A	760.29	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.259;DP=732;FS=0.000;HRun=3;HaplotypeScore=93.1970;InbreedingCoeff=0.9894;MQ=73.08;MQ0=0;MQRankSum=-1.090;QD=30.41;ReadPosRankSum=-1.001;VQSLOD=2.7461;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,1510	0/0:10,0:10:30.10:0,30,432	0/0:26,0:26:53.02:0,53,893	0/0:23,0:23:54.07:0,54,698	0/0:25,0:25:72.23:0,72,1017	0/0:27,0:27:81.27:0,81,1165	1/1:2,23:25:69.22:855,69,0	0/0:30,0:30:78.25:0,78,1107	0/0:26,0:26:78.26:0,78,1115	0/0:41,0:41:99:0,120,1728	0/0:8,0:8:24.08:0,24,345	0/0:43,0:43:99:0,129,1838	0/0:35,0:35:96.32:0,96,1380	0/0:33,0:33:93.31:0,93,1337	0/0:35,0:35:99:0,102,1460	0/0:32,0:32:96.30:0,96,1347	0/0:44,0:44:99:0,132,1882	0/0:19,0:19:51.16:0,51,714	0/0:19,0:19:45.15:0,45,645	0/0:12,0:12:36.05:0,36,475	0/0:25,0:25:75.22:0,75,1041	0/0:19,0:19:57.19:0,57,821	0/0:19,0:19:51.17:0,51,734	0/0:36,0:36:99:0,108,1513	0/0:18,0:18:51.17:0,51,732	0/0:25,0:25:72.23:0,72,1020	0/0:33,0:33:99:0,99,1377	0/0:6,0:6:18.06:0,18,259
chr10	81919695	.	AT	A	426.27	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.902;DP=542;FS=23.265;HRun=8;HaplotypeScore=63.7338;InbreedingCoeff=0.8780;MQ=87.61;MQ0=0;MQRankSum=-2.441;QD=17.05;ReadPosRankSum=-2.180;VQSLOD=1.7869;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.26:0,90,1074	0/0:21,0:21:54.17:0,54,652	0/0:28,0:28:69.08:0,69,761	0/0:15,0:15:35.18:0,35,406	0/0:23,0:23:60.17:0,60,712	0/0:13,0:13:30.09:0,30,362	0/0:4,0:4:9.03:0,9,109	1/1:7,18:25:54.07:521,54,0	0/0:10,0:10:15.05:0,15,181	0/0:29,0:29:81.23:0,81,961	0/0:20,0:20:57.17:0,57,688	0/0:13,0:13:30.09:0,30,362	0/0:30,0:30:78.23:0,78,930	0/0:21,0:21:51.13:0,51,585	0/0:27,0:27:72.20:0,72,848	0/0:28,0:28:78.21:0,78,914	0/0:18,0:18:54.17:0,54,652	0/0:10,0:10:27.07:0,27,314	0/0:11,0:11:24.06:0,24,278	0/0:11,0:11:27.08:0,27,325	0/0:21,0:21:57.17:0,57,678	0/0:19,0:19:57.17:0,57,688	0/0:9,0:9:21.06:0,21,253	0/0:9,0:9:11.98:0,12,124	0/0:36,0:36:99:0,99,1149	0/0:22,0:22:58.73:0,59,693	0/0:20,0:20:51.11:0,51,596	0/0:14,1:15:13.15:0,13,441
chr10	81919721	.	C	CA	2297.92	PASS	AB=0.680;AC=10;AF=0.179;AN=56;BaseQRankSum=9.494;DP=628;FS=221.640;HRun=0;HaplotypeScore=168.2708;InbreedingCoeff=-0.2174;MQ=85.44;MQ0=0;MQRankSum=-12.917;QD=12.16;ReadPosRankSum=1.465;VQSLOD=-0.6401;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.25:0,90,1198	0/0:20,0:20:60.20:0,60,837	0/0:29,0:29:84.27:0,84,1142	0/0:19,0:19:51.10:0,51,622	0/0:22,0:22:66.21:0,66,906	0/1:9,10:18:99:289,0,100	0/1:10,6:16:99:174,0,121	0/1:10,12:22:99:524,0,186	0/1:10,11:21:99:224,0,107	0/0:25,0:25:75.23:0,75,1022	0/0:24,0:24:72.24:0,72,1006	0/1:9,12:21:99:273,0,113	0/0:26,0:26:78.26:0,78,1091	0/0:27,0:27:75.21:0,75,996	0/0:38,0:38:99:0,114,1575	0/0:29,0:29:87.28:0,87,1199	0/0:23,0:23:69.21:0,69,932	0/0:12,0:12:36.11:0,36,487	0/1:5,4:9:82.07:170,0,82	0/1:16,8:24:99:213,0,341	0/0:17,0:17:51.16:0,51,696	0/0:22,0:22:66.21:0,66,905	0/1:12,7:19:99:103,0,144	0/1:7,6:13:42.08:42,0,119	0/0:35,0:35:99:0,105,1430	0/0:23,0:23:66.21:0,66,902	0/1:10,15:25:68.41:431,0,68	0/0:18,0:18:51.14:0,51,677
chr10	81919956	.	AAG	A	5848.97	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.479;DP=606;FS=0.000;HRun=0;HaplotypeScore=94.0775;InbreedingCoeff=0.9986;MQ=91.01;MQ0=0;MQRankSum=-5.926;QD=40.06;ReadPosRankSum=2.054;VQSLOD=6.8303;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,2006	0/0:13,0:13:36.10:0,36,658	0/0:28,0:28:81.28:0,81,1513	0/0:25,0:25:64.84:0,65,1113	0/0:23,0:23:69.22:0,69,1283	1/1:1,23:24:69.23:1056,69,0	0/0:34,0:34:99:0,102,1894	0/0:32,0:32:90.14:0,90,1695	1/1:0,14:14:36.12:534,36,0	0/0:18,0:18:51.17:0,51,971	0/0:19,0:19:57.18:0,57,1067	1/1:2,21:23:63.21:963,63,0	0/0:38,0:38:99:0,111,2071	0/0:35,0:35:99:0,105,1941	0/0:36,0:36:99:0,108,2037	0/0:22,1:23:23.29:0,23,1219	0/0:20,0:20:60.21:0,60,1159	0/0:7,0:7:21.03:0,21,368	1/1:0,20:20:57.17:831,57,0	1/1:0,14:14:39.10:563,39,0	0/0:17,0:17:51.17:0,51,969	0/0:13,0:13:36.12:0,36,695	1/1:0,14:14:39.10:572,39,0	1/1:0,18:18:39.07:597,39,0	0/0:18,0:18:54.19:0,54,1042	0/0:16,0:16:48.16:0,48,928	1/1:0,19:19:48.16:734,48,0	0/0:9,0:9:27.09:0,27,521
chr10	81921346	.	AG	A	1837.98	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.492;DP=742;FS=2.472;HRun=3;HaplotypeScore=84.1381;InbreedingCoeff=0.9920;MQ=88.10;MQ0=0;MQRankSum=-6.226;QD=31.69;ReadPosRankSum=2.549;VQSLOD=3.9364;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,56:58:99:1933,156,0	0/0:7,0:7:21.07:0,21,301	0/0:23,0:23:63.21:0,63,880	0/0:31,0:30:84.25:0,84,1139	0/0:28,0:27:84.27:0,84,1184	0/0:21,0:21:60.18:0,60,823	0/0:27,0:27:75.25:0,75,1077	0/0:38,0:38:99:0,102,1438	0/0:31,0:31:93.30:0,93,1319	0/0:18,0:18:45.15:0,45,648	0/0:17,0:17:51.17:0,51,732	0/0:34,0:34:99:0,99,1425	0/0:29,0:29:84.28:0,84,1203	0/0:28,0:28:81.27:0,81,1154	0/0:32,0:32:93.31:0,93,1339	0/0:29,0:29:84.25:0,84,1188	0/0:25,0:25:75.25:0,75,1076	0/0:34,0:34:99:0,99,1344	0/0:19,0:19:51.17:0,51,733	0/0:24,0:24:72.23:0,72,1015	0/0:33,0:33:93.31:0,93,1338	0/0:28,0:28:84.27:0,84,1184	0/0:18,0:18:54.18:0,54,776	0/0:27,0:27:78.26:0,78,1123	0/0:15,0:15:45.15:0,45,648	0/0:31,0:31:90.29:0,90,1280	0/0:30,0:30:81.27:0,81,1165	0/0:7,0:7:21.07:0,21,302
chr10	81924114	.	C	CT	2950.29	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=12.898;DP=353;FS=7.714;HRun=3;HaplotypeScore=42.4800;InbreedingCoeff=0.9323;MQ=61.62;MQ0=0;MQRankSum=0.177;QD=23.60;ReadPosRankSum=-1.388;VQSLOD=2.0583;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:68.57:0,69,793	0/0:6,0:6:15.05:0,15,180	0/0:6,0:5:8.89:0,9,86	0/0:3,0:3:9.03:0,9,108	0/0:20,0:20:57.17:0,57,684	1/1:1,9:10:27.09:338,27,0	1/1:4,2:6:9.91:103,10,0	1/1:24,0:24:44.85:251,45,0	1/1:0,5:5:12.04:150,12,0	0/0:18,0:18:48.13:0,48,563	0/0:19,0:19:54.17:0,54,647	1/1:1,7:8:18.06:223,18,0	0/0:11,0:11:30.09:0,30,360	0/0:5,0:5:15.05:0,15,180	0/0:7,0:7:21:0,21,222	0/0:13,0:13:39.12:0,39,468	0/0:21,0:21:60.17:0,60,707	0/0:15,0:15:42.13:0,42,501	1/1:7,15:22:51.14:617,51,0	1/1:2,17:19:48.58:584,49,0	0/0:7,0:7:21.06:0,21,252	0/0:5,0:5:15.05:0,15,180	1/1:2,7:9:15.05:187,15,0	1/1:0,1:1:3.01:37,3,0	0/0:15,0:15:42.13:0,42,504	0/0:23,0:23:60.17:0,60,710	1/1:2,18:21:54.17:672,54,0	0/0:10,0:10:30.09:0,30,360
chr10	81924123	.	T	TA	1230.61	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=13.110;DP=342;FS=8.663;HRun=2;HaplotypeScore=48.2863;InbreedingCoeff=0.5191;MQ=59.50;MQ0=2;MQRankSum=1.653;QD=10.79;ReadPosRankSum=0.304;VQSLOD=0.8874;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:65.67:0,66,751	0/0:5,0:5:15.05:0,15,186	0/0:4,0:2:3.01:0,3,37	0/0:3,0:3:5.93:0,6,54	0/0:20,0:20:57.12:0,57,644	1/1:9,0:9:24.95:113,25,0	0/1:4,0:4:9.89:17,0,10	1/1:0,20:20:54.09:674,54,0	0/1:6,0:6:10.92:32,0,11	0/0:17,0:17:45.12:0,45,530	0/0:22,0:22:54.17:0,54,668	0/1:9,0:9:30.70:50,0,31	0/0:12,0:12:36.03:0,36,406	0/0:7,0:7:18.04:0,18,210	0/0:8,0:8:24.05:0,24,274	0/0:14,0:14:36.08:0,36,412	0/0:20,0:20:57.13:0,57,665	0/0:14,0:14:36.09:0,36,430	0/1:20,0:18:19.34:100,0,19	1/1:17,0:17:23.40:169,23,0	0/0:9,0:9:24.07:0,24,297	0/0:4,0:4:12.04:0,12,148	0/1:7,0:7:2.68:39,0,3	1/1:1,0:1:2.80:13,3,0	0/0:15,0:15:42.12:0,42,506	0/0:18,0:18:54.14:0,54,627	1/1:21,0:21:29.07:203,29,0	0/0:11,0:11:32.47:0,32,378
chr10	81924232	.	T	TC	656.91	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=4.007;DP=426;FS=2.519;HRun=9;HaplotypeScore=53.9651;InbreedingCoeff=0.7842;MQ=77.26;MQ0=0;MQRankSum=0.360;QD=8.53;ReadPosRankSum=-0.781;VQSLOD=1.3841;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:25:51.14:564,51,0	0/0:11,0:11:23.99:0,24,208	0/1:11,0:10:13:13,0,88	0/0:14,0:14:29.89:0,30,249	0/0:20,0:20:50.94:0,51,435	0/0:23,0:23:56.98:0,57,495	1/1:1,0:7:8.69:57,9,0	1/1:5,0:6:2.84:14,3,0	0/0:11,0:11:20.98:0,21,182	0/0:8,0:8:18:0,18,156	0/0:25,0:25:53.97:0,54,469	0/0:6,0:6:14.99:0,15,130	1/1:4,0:6:2.84:15,3,0	1/1:0,1:11:8.42:42,8,0	0/0:13,0:13:35.99:0,36,313	0/0:14,0:14:38.98:0,39,339	0/0:27,0:27:68.92:0,69,592	0/0:10,0:10:23.99:0,24,208	0/0:11,0:11:23.99:0,24,208	0/0:16,0:15:23.92:0,24,201	0/0:42,0:42:99:0,105,910	1/1:9,1:11:14.91:118,15,0	0/0:11,0:11:26.89:0,27,224	0/0:11,0:11:26.94:0,27,227	0/0:26,0:26:59.94:0,60,516	0/0:23,0:22:56.99:0,57,495	0/0:17,1:18:11.81:0,12,331	0/0:9,0:8:20.98:0,21,182
chr10	81924706	.	AATATCCATTTATCAATGAGTGC	A	13964.69	PASS	AC=16;AF=0.308;AN=52;BaseQRankSum=13.641;DP=649;FS=0.000;HRun=0;HaplotypeScore=301.8275;InbreedingCoeff=0.9866;MQ=42.12;MQ0=35;MQRankSum=-10.611;QD=82.15;ReadPosRankSum=4.052;VQSLOD=3.8039;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:30:69.11:0,69,4229	0/0:4,0:4:12.04:0,12,1260	./.	./.	0/0:25,0:22:51.18:0,51,4430	1/1:7,9:14:18.06:1067,18,0	0/0:17,0:14:42.14:0,42,3557	0/0:33,0:24:69.24:0,69,4393	1/1:8,12:15:21.07:1217,21,0	0/0:31,0:28:78.27:0,78,7095	0/0:23,0:23:47.95:0,48,4395	1/1:10,19:21:48.16:2801,48,0	0/0:33,0:28:62.76:0,63,6008	0/0:37,0:31:50.85:0,51,5347	0/0:39,0:34:60.68:0,61,5979	0/0:31,0:25:60.16:0,60,4705	0/0:24,0:22:36.12:0,36,2961	0/0:23,0:23:39.13:0,39,3801	1/1:11,8:14:21.06:1014,21,0	1/1:6,16:22:45.15:2647,45,0	0/0:27,0:17:33.11:0,33,2686	0/0:28,0:27:50.68:0,51,5085	1/1:3,8:9:24.08:1281,24,0	1/1:10,8:14:12.63:830,13,0	0/0:24,0:24:30.57:0,31,3094	0/0:31,0:26:72.25:0,72,6753	1/1:14,20:25:51.18:3106,51,0	0/0:15,0:13:30.10:0,30,3148
chr10	81924890	.	C	CT	583.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.808;DP=587;FS=0.800;HRun=3;HaplotypeScore=89.9246;InbreedingCoeff=0.9658;MQ=71.45;MQ0=0;MQRankSum=-1.565;QD=26.51;ReadPosRankSum=-0.285;VQSLOD=2.7633;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:61.40:678,61,0	0/0:10,0:10:30.09:0,30,359	0/0:10,0:10:14.12:0,14,176	0/0:11,0:11:20.97:0,21,195	0/0:28,0:28:66.08:0,66,715	0/0:17,0:17:37.32:0,37,189	0/0:17,0:17:45.08:0,45,494	0/0:27,0:27:71.54:0,72,533	0/0:16,0:16:29.24:0,29,124	0/0:34,0:33:96.25:0,96,1105	0/0:26,0:26:54.24:0,54,664	0/0:17,0:17:34.52:0,35,192	0/0:33,0:33:90.28:0,90,1076	0/0:28,0:28:78.18:0,78,896	0/0:29,0:29:72.13:0,72,809	0/0:24,0:24:61.21:0,61,772	0/0:14,0:14:42.04:0,42,471	0/0:23,0:23:63.09:0,63,700	0/0:11,0:11:24.34:0,24,107	0/0:29,0:28:54.14:0,54,281	0/0:24,0:24:72.21:0,72,851	0/0:15,0:15:39.09:0,39,450	0/0:27,0:27:56.96:0,57,258	0/0:16,0:16:35.16:0,35,167	0/0:11,0:11:33.05:0,33,359	0/0:33,0:33:93.27:0,93,1095	0/0:27,0:27:51.64:0,52,216	0/0:8,0:8:18.06:0,18,215
chr10	81924893	.	TA	T	450.76	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.171;DP=582;FS=0.000;HRun=9;HaplotypeScore=89.1674;InbreedingCoeff=0.9593;MQ=68.70;MQ0=0;MQRankSum=1.364;QD=18.03;ReadPosRankSum=-3.478;VQSLOD=2.6476;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:65.51:0,66,323	0/0:10,0:10:30.09:0,30,346	0/0:8,0:8:14.71:0,15,138	0/0:9,0:9:16.22:0,16,146	0/0:27,0:27:63.14:0,63,702	0/0:21,0:21:37.09:0,37,193	0/0:17,0:17:39.10:0,39,438	1/1:4,21:25:60.02:546,60,0	0/0:14,0:14:34.09:0,34,168	0/0:33,0:32:87.25:0,87,995	0/0:23,1:25:29.54:0,30,573	0/0:18,0:18:34.22:0,34,174	0/0:32,0:32:90.27:0,90,1038	0/0:26,0:26:72.21:0,72,828	0/0:28,0:28:69.19:0,69,786	0/0:24,0:25:69.02:0,69,766	0/0:15,0:15:42.08:0,42,459	0/0:22,0:22:54.12:0,54,608	0/0:11,0:11:25.70:0,26,133	0/0:27,0:26:52.71:0,53,291	0/0:25,0:25:75.20:0,75,847	0/0:17,0:17:42.11:0,42,474	0/0:27,0:27:57.99:0,58,317	0/0:16,0:16:26.58:0,27,146	0/0:12,0:12:27.07:0,27,303	0/0:32,0:32:89.94:0,90,1014	0/0:28,0:28:68.18:0,68,335	0/0:8,0:8:18.05:0,18,208
chr10	81924902	.	A	AAAG	9510.29	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-6.697;DP=584;FS=5.352;HRun=0;HaplotypeScore=80.3419;InbreedingCoeff=0.9860;MQ=69.66;MQ0=0;MQRankSum=-3.439;QD=50.05;ReadPosRankSum=2.978;VQSLOD=7.2433;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:26:72.14:1321,72,0	0/0:11,0:11:33.09:0,33,510	0/0:5,0:5:14.26:0,14,184	0/0:13,0:13:8.17:0,8,217	0/0:24,0:24:66.21:0,66,1026	1/1:0,20:22:36.12:784,36,0	0/0:15,0:15:45.13:0,45,684	0/0:24,0:24:67.27:0,67,611	1/1:0,14:16:36.12:820,36,0	0/0:35,0:34:99:0,102,1522	0/0:25,0:25:62.57:0,63,900	1/1:0,16:18:33.11:731,33,0	0/0:33,0:33:90.31:0,90,1459	0/0:27,0:27:78.22:0,78,1205	0/0:23,0:23:69.23:0,69,1109	0/0:27,0:27:77.72:0,78,1159	0/0:16,0:16:45.09:0,45,672	0/0:18,0:18:51.16:0,51,828	1/1:0,9:12:35.73:572,36,0	1/1:0,21:23:69.16:1412,69,0	0/0:26,0:26:75.24:0,75,1193	0/0:18,0:18:48.13:0,48,728	1/1:0,25:29:69.10:1479,69,0	1/1:0,13:14:33.11:755,33,0	0/0:12,0:12:36.07:0,36,492	0/0:31,0:31:93.31:0,93,1484	1/1:0,28:29:72.25:1637,72,0	0/0:11,0:11:30.01:0,30,385
chr10	81925124	.	T	TA	574.20	PASS	AB=0.909;AC=3;AF=0.054;AN=56;BaseQRankSum=-5.635;DP=621;FS=13.873;HRun=10;HaplotypeScore=64.9027;InbreedingCoeff=0.7012;MQ=75.14;MQ0=1;MQRankSum=0.728;QD=12.22;ReadPosRankSum=-3.958;VQSLOD=0.7002;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:68.92:0,69,566	0/0:6,0:6:17.98:0,18,148	0/0:23,0:19:32.79:0,33,306	0/0:19,1:19:20.14:0,20,152	0/0:33,0:33:59.64:0,60,634	0/0:24,0:24:59.90:0,60,489	0/0:13,0:13:35.94:0,36,293	1/1:13,24:37:44.51:668,45,0	0/0:13,0:14:37.99:0,38,299	0/0:31,0:31:80.83:0,81,656	0/0:40,0:41:96.87:0,97,762	0/0:17,0:17:30.82:0,31,248	0/0:31,0:31:86.84:0,87,707	0/0:15,0:15:38.94:0,39,319	0/0:17,0:17:47.94:0,48,394	0/0:28,0:28:74.87:0,75,610	0/0:29,0:29:68.84:0,69,561	0/0:10,0:10:23.97:0,24,197	0/0:13,0:13:29.95:0,30,244	0/0:27,0:27:74.89:0,75,612	0/0:17,0:17:44.95:0,45,369	0/0:22,0:22:56.92:0,57,466	0/0:32,0:32:80.88:0,81,665	0/0:12,0:12:28.99:0,29,228	0/0:17,1:18:47.90:0,48,392	0/0:34,0:34:86.89:0,87,714	0/0:21,0:21:59.90:0,60,487	0/1:9,1:10:4.99:5,0,170
chr10	81926346	.	T	TCTC	12416.90	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=0.253;DP=783;FS=0.000;HRun=0;HaplotypeScore=110.0976;InbreedingCoeff=0.9997;MQ=89.00;MQ0=0;MQRankSum=-2.848;QD=58.02;ReadPosRankSum=3.342;VQSLOD=6.8965;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,2450	0/0:15,0:15:45.14:0,45,761	0/0:40,0:40:99:0,108,1823	0/0:34,0:33:93.31:0,93,1590	0/0:35,0:35:96.33:0,96,1684	1/1:0,28:28:78.17:1840,78,0	0/0:29,0:29:84.29:0,84,1482	0/0:26,0:26:78.27:0,78,1371	1/1:2,27:29:75.26:1756,75,0	0/0:20,0:20:60.20:0,60,1031	0/0:26,0:26:75.24:0,75,1286	1/1:0,27:27:75.26:1769,75,0	0/0:30,0:30:90.28:0,90,1514	0/0:30,0:30:87.28:0,87,1495	0/0:28,0:28:84.27:0,84,1449	0/0:33,1:34:28.39:0,28,1618	0/0:19,0:19:51.17:0,51,900	0/0:11,0:11:30.10:0,30,515	1/1:1,17:21:57.18:1273,57,0	1/1:1,27:28:75.20:1687,75,0	0/0:44,0:44:99:0,129,2225	0/0:28,0:28:74.31:0,74,1288	1/1:1,21:23:42.14:986,42,0	1/1:0,30:30:63.15:1488,63,0	0/0:29,0:29:87.27:0,87,1480	0/0:28,0:28:78.26:0,78,1350	1/1:2,24:28:69.24:1616,69,0	0/0:14,0:14:33.11:0,33,565
chr10	81926539	.	AGAG	A	9094.18	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=18.902;DP=717;FS=5.421;HRun=0;HaplotypeScore=131.4370;InbreedingCoeff=0.9986;MQ=90.97;MQ0=1;MQRankSum=-9.949;QD=49.97;ReadPosRankSum=4.032;VQSLOD=7.2672;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,3137	0/0:6,0:6:18.06:0,18,418	0/0:40,0:40:99:0,120,2773	0/0:21,0:21:60.03:0,60,1271	0/0:30,0:30:90.29:0,90,2115	1/1:0,20:20:51.11:911,51,0	0/0:23,0:23:66.23:0,66,1624	0/0:36,0:36:99:0,105,2539	1/1:0,29:29:78.27:1452,78,0	0/0:29,0:29:84.29:0,84,2019	0/0:19,0:19:57.18:0,57,1317	1/1:0,25:25:72.25:1341,72,0	0/0:29,0:29:87.30:0,87,2112	0/0:22,0:22:66.21:0,66,1575	0/0:37,0:37:99:0,111,2737	0/0:26,0:26:78.25:0,78,1850	0/0:19,0:19:57.20:0,57,1401	0/0:13,0:12:36.12:0,36,887	1/1:0,15:15:45.10:772,45,0	1/1:0,33:33:96.15:1671,96,0	0/0:40,0:40:99:0,120,2875	0/0:18,0:18:54.19:0,54,1331	1/1:0,15:15:36.12:670,36,0	1/1:0,24:24:66.23:1228,66,0	0/0:29,0:29:87.28:0,87,2092	0/0:37,0:37:99:0,111,2709	1/1:0,21:21:57.20:1050,57,0	0/0:18,0:18:54.19:0,54,1323
chr10	81927229	.	TTAGTGAC	T	7989.69	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.387;DP=583;FS=7.273;HRun=0;HaplotypeScore=152.8435;InbreedingCoeff=0.9701;MQ=73.47;MQ0=0;MQRankSum=-14.931;QD=60.53;ReadPosRankSum=1.235;VQSLOD=4.8473;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.22:0,63,2486	0/0:14,0:14:39.13:0,39,1537	0/0:15,0:15:39.97:0,40,1221	0/0:10,0:10:27.06:0,27,621	0/0:32,0:32:96.33:0,96,3829	1/1:3,19:22:54.19:1424,54,0	0/0:15,0:15:39.12:0,39,1442	0/0:31,0:31:90.30:0,90,3425	1/1:0,11:11:33.11:870,33,0	0/0:35,0:35:99:0,105,4187	0/0:27,0:27:81.28:0,81,3237	1/1:0,20:20:57.20:1503,57,0	0/0:27,0:27:81.28:0,81,3245	0/0:17,0:17:48.16:0,48,1929	0/0:29,0:29:87.30:0,87,3432	0/0:34,0:34:99:0,102,4028	0/0:18,0:18:54.16:0,54,2054	0/0:12,0:12:33.11:0,33,1330	1/1:3,10:13:30.08:654,30,0	1/1:2,16:18:39.13:1028,39,0	0/0:34,0:34:99:0,99,3801	0/0:25,0:25:75.24:0,75,2896	1/1:0,15:15:39.09:930,39,0	1/1:3,5:8:3.01:79,3,0	0/0:19,0:19:57.20:0,57,2278	0/0:21,0:21:63.22:0,63,2508	1/1:5,20:25:57.20:1503,57,0	0/0:14,0:14:42.14:0,42,1696
chr10	81927244	.	AT	A	2734.15	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.057;DP=619;FS=0.943;HRun=2;HaplotypeScore=105.8076;InbreedingCoeff=0.9395;MQ=73.29;MQ0=0;MQRankSum=3.009;QD=33.75;ReadPosRankSum=-2.911;VQSLOD=2.6312;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:81.26:1052,81,0	0/0:14,0:14:42.14:0,42,629	0/0:16,0:16:48.15:0,48,694	0/0:10,0:10:23.24:0,23,397	0/0:34,0:34:99:0,102,1506	0/0:19,0:19:57.15:0,57,827	1/1:0,15:15:39.13:506,39,0	1/1:1,36:37:99:1318,105,0	0/0:14,0:14:42.14:0,42,628	0/0:37,0:37:99:0,108,1619	0/0:34,0:34:99:0,99,1437	0/0:24,0:24:69.20:0,69,1008	0/0:27,0:27:81.27:0,81,1213	0/0:12,0:12:36.12:0,36,529	0/0:30,0:30:90.30:0,90,1348	0/0:34,0:34:99:0,102,1529	0/0:22,0:22:66.18:0,66,946	0/0:12,0:12:33.09:0,33,472	0/0:11,0:11:33.11:0,33,494	0/0:20,0:20:51.17:0,51,762	0/0:35,0:35:99:0,105,1549	0/0:26,0:26:78.26:0,78,1151	0/0:18,0:17:36.12:0,36,538	0/0:6,0:6:3.01:0,3,41	0/0:21,0:21:63.20:0,63,926	0/0:21,0:21:63.19:0,63,923	0/0:28,0:28:81.17:0,81,1140	0/0:13,0:13:39.13:0,39,584
chr10	81927522	.	TGC	T	4207.05	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.674;DP=699;FS=7.787;HRun=0;HaplotypeScore=103.2144;InbreedingCoeff=0.9999;MQ=73.72;MQ0=0;MQRankSum=-1.507;QD=46.75;ReadPosRankSum=-1.452;VQSLOD=4.2284;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:81.28:1321,81,0	0/0:12,0:12:36.12:0,36,730	0/0:16,0:16:48.13:0,48,871	0/0:15,0:15:45.15:0,45,841	0/0:32,0:31:96.33:0,96,1921	0/0:26,0:26:75.26:0,75,1520	1/1:0,30:30:87.30:1419,87,0	1/1:0,31:31:93.29:1467,93,0	0/0:24,0:24:72.25:0,72,1447	0/0:32,0:32:96.33:0,96,1936	0/0:23,0:23:69.24:0,69,1400	0/0:27,0:27:81.28:0,81,1627	0/0:27,0:27:69.24:0,69,1400	0/0:29,0:29:84.29:0,84,1693	0/0:30,0:30:87.30:0,87,1760	0/0:27,0:27:75.26:0,75,1523	0/0:38,0:38:99:0,114,2276	0/0:14,0:14:36.12:0,36,701	0/0:26,0:26:75.26:0,75,1517	0/0:35,0:35:99:0,102,2065	0/0:29,0:29:87.30:0,87,1768	0/0:25,0:25:75.26:0,75,1522	0/0:17,0:17:48.16:0,48,963	0/0:21,0:21:63.20:0,63,1243	0/0:15,0:15:45.15:0,45,914	0/0:25,0:25:75.26:0,75,1523	0/0:27,0:27:78.27:0,78,1582	0/0:17,0:17:51.18:0,51,1036
chr10	81927989	.	A	ATAT	2622.62	PASS	AC=14;AF=0.280;AN=50;BaseQRankSum=-5.031;DP=439;FS=16.129;HRun=0;HaplotypeScore=45.4408;InbreedingCoeff=0.8108;MQ=35.00;MQ0=168;MQRankSum=-2.119;QD=21.32;ReadPosRankSum=-0.851;VQSLOD=1.3012;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:2:5.98:0,6,69	0/0:10,0:6:18.02:0,18,265	0/0:13,0:1:3.01:0,3,49	0/0:13,0:3:8.94:0,9,111	0/0:24,0:21:23.95:0,24,391	1/1:0,19:15:23.87:532,24,0	0/0:10,0:4:9.03:0,9,147	0/0:19,0:3:9.03:0,9,147	1/1:0,10:8:12.04:266,12,0	0/0:22,0:16:45.07:0,45,676	0/0:30,0:29:59.85:0,60,870	1/1:1,19:14:6.02:134,6,0	0/0:14,0:9:15.05:0,15,245	0/0:24,0:14:36.04:0,36,529	0/0:16,0:11:23.95:0,24,304	0/0:13,0:6:18.06:0,18,293	./.	0/0:6,0:1:3.01:0,3,49	1/1:5,6:2:3.01:67,3,0	1/1:1,20:21:45.15:998,45,0	./.	0/0:14,0:13:21.07:0,21,342	1/1:1,18:16:24.08:534,24,0	./.	0/0:17,0:12:24.08:0,24,378	0/0:22,0:14:42.10:0,42,653	1/1:5,15:16:12.04:267,12,0	0/0:11,0:9:18.06:0,18,294
chr10	81928874	.	GCTGA	G	4192.96	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.591;DP=883;FS=6.329;HRun=0;HaplotypeScore=146.4565;InbreedingCoeff=0.9999;MQ=75.62;MQ0=0;MQRankSum=-5.787;QD=41.93;ReadPosRankSum=-2.651;VQSLOD=2.8947;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,36:39:90.25:1652,90,0	0/0:20,0:20:60.21:0,60,1617	0/0:25,0:25:60.19:0,60,1407	0/0:26,0:26:63.21:0,63,1511	0/0:33,0:33:93.32:0,93,2484	0/0:29,0:29:87.30:0,87,2326	1/1:5,19:24:45.15:854,45,0	1/1:4,33:37:96.28:1687,96,0	0/0:42,0:42:99:0,126,3362	0/0:24,0:24:69.24:0,69,1842	0/0:24,0:24:69.22:0,69,1783	0/0:39,0:39:99:0,114,3021	0/0:46,0:46:99:0,132,3492	0/0:38,0:38:99:0,108,2829	0/0:38,0:38:99:0,114,3076	0/0:42,0:42:99:0,120,3228	0/0:27,0:27:72.25:0,72,1939	0/0:11,0:11:33.11:0,33,890	0/0:34,0:34:90.31:0,90,2408	0/0:38,0:38:99:0,114,3033	0/0:34,0:34:99:0,102,2752	0/0:33,0:33:99:0,99,2652	0/0:25,0:25:75.24:0,75,1967	0/0:46,0:46:99:0,129,3466	0/0:27,0:27:78.27:0,78,2101	0/0:36,0:36:99:0,102,2755	0/0:29,0:29:87.30:0,87,2319	0/0:17,0:17:51.18:0,51,1376
chr10	81929190	.	T	TG	10090.95	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=17.275;DP=757;FS=1.552;HRun=3;HaplotypeScore=105.0342;InbreedingCoeff=0.9976;MQ=82.42;MQ0=0;MQRankSum=-1.426;QD=30.12;ReadPosRankSum=3.034;VQSLOD=4.3827;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:59,0:59:99:942,142,0	0/0:13,0:13:39.12:0,39,460	0/0:26,0:26:72.11:0,72,801	0/0:25,0:25:71.99:0,72,827	0/0:30,0:30:84.26:0,84,1007	1/1:2,26:28:75.25:1050,75,0	1/1:22,0:22:52.92:322,53,0	1/1:33,0:33:30.25:418,30,0	1/1:2,25:27:72.24:1008,72,0	0/0:27,0:27:72.19:0,72,836	0/0:22,0:22:60.17:0,60,710	1/1:1,25:26:72.24:1002,72,0	0/0:25,0:25:72.20:0,72,850	0/0:25,0:25:69.21:0,69,828	0/0:24,0:24:63.17:0,63,743	0/0:33,0:33:96.28:0,96,1140	0/0:27,0:27:78.24:0,78,935	0/0:5,0:5:15.05:0,15,180	1/1:2,14:16:42.14:588,42,0	1/1:1,46:47:99:1890,135,0	0/0:36,0:36:99:0,108,1271	0/0:36,0:36:99:0,102,1194	1/1:2,14:16:42.13:572,42,0	1/1:0,28:28:81.27:1134,81,0	0/0:23,0:23:63.17:0,63,743	0/0:29,0:29:84.25:0,84,999	1/1:2,31:33:84.28:1164,84,0	0/0:16,0:16:48.15:0,48,576
chr10	81929193	.	G	GA	7501.02	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=8.269;DP=754;FS=0.869;HRun=1;HaplotypeScore=114.6969;InbreedingCoeff=0.9754;MQ=81.74;MQ0=0;MQRankSum=-1.796;QD=22.32;ReadPosRankSum=3.270;VQSLOD=5.0584;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,56:57:99:2156,144,0	0/0:14,0:14:38.71:0,39,477	0/0:26,0:25:71.64:0,72,840	0/0:25,0:25:72.13:0,72,887	0/0:30,0:30:87.26:0,87,1101	1/1:27,0:27:49.04:389,49,0	1/1:0,22:22:54.18:809,54,0	1/1:2,33:35:96.25:1336,96,0	1/1:28,0:28:4.41:323,4,0	0/0:26,0:26:69.20:0,69,855	0/0:21,0:21:63.20:0,63,805	1/1:25,0:25:70.06:431,70,0	0/0:25,0:25:72.18:0,72,889	0/0:23,0:23:69.22:0,69,895	0/0:24,0:24:66.20:0,66,842	0/0:32,0:32:96.30:0,96,1232	0/0:26,0:26:78.23:0,78,996	0/0:5,0:5:15.05:0,15,195	1/1:16,0:16:16.85:198,17,0	1/1:49,0:49:99:745,110,0	0/0:36,0:36:99:0,108,1385	0/0:37,0:37:99:0,105,1337	1/1:16,0:16:20.02:218,20,0	1/1:29,0:29:58.67:421,59,0	0/0:23,0:23:66.19:0,66,830	0/0:29,0:29:84.22:0,84,1048	1/1:32,0:32:81.72:477,82,0	0/0:16,0:16:48.16:0,48,622
chr10	81930857	.	A	AAAACAAAC	2940.20	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-4.836;DP=653;FS=5.306;HRun=0;HaplotypeScore=163.2647;InbreedingCoeff=0.9927;MQ=63.48;MQ0=4;MQRankSum=-6.309;QD=32.31;ReadPosRankSum=-4.198;VQSLOD=2.5763;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:12,16:31:33.54:1110,34,0	0/0:18,0:17:36.10:0,36,822	0/0:22,0:16:21.07:0,21,362	0/0:18,0:14:24.06:0,24,392	0/0:31,0:31:84.28:0,84,1991	0/0:27,0:27:63.22:0,63,1489	1/1:6,12:20:18.06:750,18,0	1/1:40,0:38:51.17:1222,51,0	0/0:27,0:27:57.17:0,57,1279	0/0:22,0:22:54.19:0,54,1367	0/0:35,0:35:81.26:0,81,1916	0/0:15,0:15:45.15:0,45,1061	0/0:19,0:19:48.16:0,48,1161	0/0:28,0:28:69.24:0,69,1657	0/0:22,0:22:48.15:0,48,1114	0/0:19,0:19:48.16:0,48,1211	0/0:34,0:34:81.26:0,81,1868	0/0:20,0:20:22.95:0,23,887	0/0:16,0:16:27.09:0,27,645	0/0:25,0:25:66.18:0,66,1380	0/0:18,0:18:39.13:0,39,940	0/0:21,0:21:39.11:0,39,826	0/0:15,0:15:24.08:0,24,567	0/0:23,0:23:48.16:0,48,1197	0/0:17,0:17:36.11:0,36,804	0/0:27,0:27:72.25:0,72,1750	0/0:23,0:22:51.16:0,51,1233	0/0:20,0:20:51.17:0,51,1236
chr10	81930874	.	A	AAAC	1129.66	PASS	AB=0.903;AC=3;AF=0.054;AN=56;BaseQRankSum=0.471;DP=639;FS=1.580;HRun=0;HaplotypeScore=104.1389;InbreedingCoeff=-0.0566;MQ=62.36;MQ0=4;MQRankSum=-4.404;QD=14.67;ReadPosRankSum=-2.146;VQSLOD=3.1785;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,1:24:99:369,0,161	0/0:14,0:13:39.12:0,39,629	0/0:22,0:12:30.10:0,30,464	0/0:18,0:15:36.67:0,37,480	0/0:33,0:33:99:0,99,1573	0/0:24,0:24:72.25:0,72,1199	0/1:14,0:14:59.11:230,0,59	0/1:26,13:37:99:632,0,639	0/0:22,0:22:66.22:0,66,1076	0/0:24,0:24:66.22:0,66,1088	0/0:30,0:30:90.29:0,90,1479	0/0:18,0:18:54.18:0,54,871	0/0:23,0:23:63.21:0,63,1026	0/0:25,0:25:72.25:0,72,1196	0/0:21,0:21:57.18:0,57,897	0/0:16,0:16:48.16:0,48,819	0/0:35,0:35:99:0,99,1589	0/0:21,0:21:60.14:0,60,920	0/0:18,0:18:51.16:0,51,778	0/0:30,0:30:87.30:0,87,1402	0/0:15,0:15:45.15:0,45,738	0/0:19,0:19:51.15:0,51,788	0/0:12,0:12:36.12:0,36,565	0/0:24,0:24:72.24:0,72,1140	0/0:19,0:19:51.16:0,51,784	0/0:30,0:30:87.30:0,87,1435	0/0:25,0:24:69.22:0,69,1094	0/0:24,0:24:66.22:0,66,1054
chr10	81932272	.	ATGAG	A	2071.09	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=8.841;DP=630;FS=9.036;HRun=0;HaplotypeScore=100.8881;InbreedingCoeff=0.7642;MQ=69.27;MQ0=2;MQRankSum=2.452;QD=27.61;ReadPosRankSum=-0.660;VQSLOD=2.6413;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:57.20:1077,57,0	0/0:11,0:11:33.09:0,33,732	0/0:25,0:18:34.20:0,34,448	0/0:16,0:15:35.62:0,36,398	0/0:30,0:30:78.53:0,79,1549	0/0:24,0:24:66.09:0,66,1234	0/1:15,0:15:99:110,0,183	1/1:1,29:30:87.03:1014,87,0	0/0:21,0:21:63.16:0,63,1516	0/0:30,0:30:90.23:0,90,1854	0/0:25,0:25:72.10:0,72,1439	0/0:25,0:25:69.19:0,69,1615	0/0:25,0:25:50.40:0,50,1345	0/0:30,0:30:87.21:0,87,1969	0/0:27,0:27:81.16:0,81,1774	0/0:22,0:22:66.14:0,66,1377	0/0:18,0:18:54.10:0,54,1232	0/0:5,0:5:15.04:0,15,348	0/0:19,0:19:56.13:0,56,904	0/0:28,0:28:84.20:0,84,1889	0/0:13,0:13:33.07:0,33,736	0/0:26,0:26:72.03:0,72,1689	0/0:29,0:29:87.17:0,87,1874	0/0:17,0:17:45.07:0,45,927	0/0:25,0:25:75.12:0,75,1511	0/0:29,0:29:84.23:0,84,1873	0/0:30,0:30:90.15:0,90,1950	0/0:4,0:4:12.01:0,12,210
chr10	81932432	.	TC	T	531.47	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.906;DP=724;FS=9.843;HRun=1;HaplotypeScore=86.7985;InbreedingCoeff=0.9697;MQ=92.99;MQ0=1;MQRankSum=-3.708;QD=29.53;ReadPosRankSum=-0.205;VQSLOD=2.2204;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:48.07:626,48,0	0/0:10,0:10:30.09:0,30,456	0/0:38,0:34:95.31:0,95,1358	0/0:61,0:54:78.06:0,78,1557	0/0:25,0:25:75.26:0,75,1195	0/0:25,0:25:75.24:0,75,1176	0/0:18,0:18:54.18:0,54,860	0/0:31,0:31:93.32:0,93,1487	0/0:27,0:27:81.22:0,81,1199	0/0:38,0:38:99:0,114,1811	0/0:19,0:19:57.19:0,57,911	0/0:26,0:26:78.27:0,78,1247	0/0:26,0:26:78.25:0,78,1223	0/0:30,0:30:84.25:0,84,1291	0/0:28,0:28:81.28:0,81,1294	0/0:18,0:18:54.18:0,54,847	0/0:20,0:20:60.17:0,60,900	0/0:5,0:5:12.02:0,12,168	0/0:16,0:16:48.12:0,48,737	0/0:34,0:34:99:0,102,1628	0/0:43,0:43:99:0,126,1945	0/0:25,0:25:75.24:0,75,1170	0/0:20,0:20:60.20:0,60,959	0/0:22,0:22:66.22:0,66,1049	0/0:23,0:23:69.24:0,69,1101	0/0:35,0:35:99:0,105,1608	0/0:28,0:28:84.29:0,84,1331	0/0:15,0:15:45.15:0,45,719
chr10	81941501	.	GA	G	592.41	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=4.502;DP=276;FS=7.365;HRun=9;HaplotypeScore=29.0749;InbreedingCoeff=0.8406;MQ=61.66;MQ0=7;MQRankSum=2.361;QD=16.93;ReadPosRankSum=-1.503;VQSLOD=2.2387;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:21.01:192,21,0	0/0:2,0:2:6.02:0,6,69	0/0:6,0:4:2.85:0,3,34	0/0:7,0:5:12.17:0,12,104	0/0:19,0:18:54.16:0,54,623	0/0:17,0:16:42.59:0,43,475	1/1:1,4:5:9:82,9,0	1/1:5,17:20:50.97:453,51,0	0/0:9,0:9:24.07:0,24,277	0/0:14,0:14:41.96:0,42,465	0/0:12,0:10:27.08:0,27,309	0/0:9,0:9:23.86:0,24,255	0/0:7,0:7:21.06:0,21,242	0/0:7,0:7:21.06:0,21,241	0/0:3,0:3:9.03:0,9,104	0/0:8,0:8:24.07:0,24,276	0/0:15,0:15:45.13:0,45,519	0/0:7,0:7:18.05:0,18,207	0/0:13,0:13:33.97:0,34,370	0/0:21,0:21:48.61:0,49,553	./.	0/0:7,0:6:18.04:0,18,198	0/0:10,0:10:24.06:0,24,268	0/0:8,0:7:21.05:0,21,229	0/0:9,0:9:27.08:0,27,312	0/0:7,0:6:18.05:0,18,206	0/0:15,0:15:39.12:0,39,450	0/0:6,0:6:18.05:0,18,207
chr10	81942113	.	C	CA	5280.80	PASS	AB=0.900;AC=17;AF=0.304;AN=56;BaseQRankSum=2.435;DP=603;FS=2.488;HRun=8;HaplotypeScore=72.9062;InbreedingCoeff=0.9211;MQ=78.15;MQ0=0;MQRankSum=0.898;QD=27.65;ReadPosRankSum=2.756;VQSLOD=5.4886;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:63.03:0,63,577	0/1:8,1:9:10.71:11,0,168	0/0:26,0:23:46.44:0,46,378	0/0:17,0:16:29.63:0,30,242	0/0:34,0:34:84.03:0,84,769	1/1:4,30:34:78.23:900,78,0	0/0:9,0:9:27:0,27,242	0/0:36,0:36:84.03:0,84,769	1/1:6,18:24:48.14:554,48,0	0/0:34,2:36:33.74:0,34,811	0/0:24,0:24:69.04:0,69,631	1/1:2,12:14:33.10:381,33,0	0/0:16,0:16:45.02:0,45,411	0/0:15,0:15:36.02:0,36,330	0/0:27,0:27:72:0,72,649	0/0:23,0:23:54.01:0,54,490	0/0:15,0:15:42.02:0,42,384	0/0:16,0:16:36:0,36,329	1/1:1,8:10:26.91:291,27,0	1/1:3,33:36:99:1174,102,0	0/0:12,0:12:26.99:0,27,242	0/0:21,0:21:60.01:0,60,544	1/1:1,23:25:66.20:759,66,0	1/1:1,11:12:33.10:381,33,0	0/0:25,0:25:75.02:0,75,681	0/0:18,0:18:51.03:0,51,467	1/1:3,24:27:72.21:830,72,0	0/0:16,0:16:29.98:0,30,275
chr10	81942677	.	AC	A	1281.09	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=5.914;DP=446;FS=3.576;HRun=9;HaplotypeScore=49.6764;InbreedingCoeff=0.7743;MQ=80.49;MQ0=1;MQRankSum=-3.286;QD=20.02;ReadPosRankSum=0.935;VQSLOD=4.1600;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,34:39:99:960,105,0	0/0:6,0:6:15.03:0,15,163	0/0:19,0:17:33.01:0,33,332	0/0:16,0:17:26.81:0,27,292	0/0:18,0:18:42.12:0,42,485	0/0:13,0:14:35.91:0,36,373	1/1:2,16:18:48.03:439,48,0	0/0:13,0:14:21.05:0,21,239	0/0:17,0:17:14.86:0,15,423	0/0:13,0:13:30.09:0,30,346	0/0:14,1:15:39.09:0,39,432	0/0:19,1:20:32.66:0,33,599	0/0:15,0:15:45.11:0,45,499	0/0:14,0:14:39.12:0,39,449	0/0:20,0:20:51.13:0,51,571	0/0:13,0:13:39.12:0,39,450	0/0:19,0:19:54.16:0,54,623	0/0:16,0:16:48.14:0,48,554	0/0:8,0:8:15.04:0,15,173	0/0:13,0:13:33.10:0,33,381	0/0:19,0:19:48.14:0,48,554	0/0:15,0:15:33.09:0,33,370	0/0:13,0:13:32.91:0,33,326	0/0:22,0:22:48.01:0,48,534	0/0:6,0:6:15.04:0,15,173	0/0:15,1:16:39.07:0,39,427	0/0:19,1:20:20.66:0,21,483	0/1:7,0:7:9:9,0,155
chr10	81943110	.	A	AT	2645.60	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-2.753;DP=647;FS=0.436;HRun=7;HaplotypeScore=74.8057;InbreedingCoeff=0.9935;MQ=75.29;MQ0=0;MQRankSum=-3.120;QD=27.56;ReadPosRankSum=-3.385;VQSLOD=2.8438;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,31:35:90.28:1087,90,0	0/0:7,0:7:18.03:0,18,174	0/0:26,0:26:50.58:0,51,508	0/0:16,0:16:17.55:0,18,234	0/0:43,0:43:99:0,120,1158	0/0:39,0:39:99:0,111,1072	1/1:2,25:27:66.20:797,66,0	1/1:8,26:34:78.20:904,78,0	0/0:27,0:27:69.11:0,69,666	0/0:27,0:27:75.12:0,75,724	0/0:30,0:30:81.13:0,81,782	0/0:12,0:12:30.04:0,30,284	0/0:23,0:23:60.08:0,60,573	0/0:17,0:17:45.07:0,45,435	0/0:30,0:30:81.10:0,81,770	0/0:20,0:20:57.09:0,57,550	0/0:17,0:17:39.05:0,39,377	0/0:12,0:12:33.05:0,33,319	0/0:21,0:20:51.07:0,51,488	0/0:32,0:32:90.13:0,90,863	0/0:14,0:14:36.04:0,36,341	0/0:19,0:19:57.09:0,57,550	0/0:16,0:16:45.07:0,45,434	0/0:29,0:29:69.11:0,69,666	0/0:14,0:14:39.06:0,39,377	0/0:27,0:27:72.11:0,72,691	0/0:20,0:20:48.05:0,48,457	0/0:13,0:13:36.06:0,36,348
chr10	81944220	.	ATGTGTGTGTG	A	2015.51	PASS	AB=0.788;AC=19;AF=0.380;AN=50;BaseQRankSum=4.884;DP=527;FS=7.476;HRun=0;HaplotypeScore=158.9762;InbreedingCoeff=0.6599;MQ=62.25;MQ0=8;MQRankSum=-7.787;QD=10.13;ReadPosRankSum=0.072;VQSLOD=2.2059;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:34:8.70:159,9,0	0/0:10,0:12:12.04:0,12,286	./.	./.	0/0:16,0:18:24.08:0,24,535	1/1:14,3:18:9.67:273,10,0	0/0:17,0:21:21.07:0,21,445	0/0:19,0:19:11.95:0,12,172	0/1:15,4:19:1.63:154,0,2	0/0:18,0:18:12.51:0,13,298	0/0:8,0:13:8.92:0,9,169	1/1:7,6:14:14.66:405,15,0	1/1:11,0:17:7.93:76,8,0	0/1:9,1:12:11.92:139,0,12	0/0:21,0:24:32.47:0,32,1043	0/0:11,0:17:15.05:0,15,413	0/0:22,0:28:36.10:0,36,904	0/0:15,0:17:14.92:0,15,353	1/1:20,1:21:6.02:158,6,0	1/1:16,5:21:3.01:35,3,0	0/0:14,0:14:9.50:0,10,256	0/1:9,1:13:48.72:83,0,49	1/1:12,3:17:15.03:282,15,0	./.	0/0:16,0:17:15.05:0,15,394	0/0:19,0:21:27.08:0,27,688	1/1:5,4:11:17.54:433,18,0	0/0:9,0:11:19.24:0,19,384
chr10	81944990	.	G	GAAA	7566.44	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.556;DP=631;FS=0.752;HRun=8;HaplotypeScore=132.3003;InbreedingCoeff=0.9971;MQ=80.36;MQ0=0;MQRankSum=-13.048;QD=37.83;ReadPosRankSum=-3.605;VQSLOD=2.9701;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:89.25:0,89,1099	0/0:11,0:11:30.09:0,30,394	0/0:22,0:22:54.16:0,54,690	0/0:19,0:18:16.38:0,16,463	0/0:30,0:30:75.20:0,75,985	1/1:10,19:30:69.19:1280,69,0	0/0:14,0:14:42.14:0,42,551	0/0:28,0:28:52.40:0,52,706	1/1:6,12:18:33.07:618,33,0	0/0:33,0:33:96.31:0,96,1261	0/0:21,0:21:57.17:0,57,749	1/1:7,16:23:47.15:834,47,0	0/0:18,0:18:48.10:0,48,598	0/0:26,0:26:66.03:0,66,848	0/0:25,0:25:72.22:0,72,930	0/0:20,0:20:57.18:0,57,749	0/0:26,0:26:75.24:0,75,983	0/0:15,0:15:42.13:0,42,549	1/1:13,10:23:48.14:898,48,0	1/1:15,24:42:81.21:1475,81,0	0/0:16,0:16:45.13:0,45,577	0/0:23,0:23:63.19:0,63,828	1/1:8,15:23:51.13:963,51,0	1/1:5,8:14:21.02:382,21,0	0/0:14,0:14:36.10:0,36,473	0/0:25,0:25:66.19:0,66,855	1/1:8,18:27:63.12:1117,63,0	0/0:13,0:13:33.10:0,33,434
chr10	81945455	.	AACAC	A	1159.76	PASS	AB=0.880;AC=11;AF=0.212;AN=52;BaseQRankSum=2.534;DP=615;FS=0.000;HRun=0;HaplotypeScore=118.9321;InbreedingCoeff=0.3741;MQ=66.77;MQ0=7;MQRankSum=0.550;QD=6.34;ReadPosRankSum=1.949;VQSLOD=2.4011;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:56.72:0,57,831	0/0:8,0:8:12.02:0,12,221	./.	./.	0/0:15,0:15:24.06:0,24,480	0/1:12,6:18:49.84:299,0,50	0/1:16,0:16:16.14:16,0,91	0/0:34,0:34:20.90:0,21,202	1/1:11,12:24:27.09:405,27,0	0/0:18,0:20:32.52:0,33,418	0/0:13,0:14:8.77:0,9,155	0/1:18,4:23:1.45:153,0,1	0/0:15,0:30:14.88:0,15,256	0/0:20,0:30:12.04:0,12,211	0/0:19,0:23:41.28:0,41,793	0/0:17,0:20:30.04:0,30,522	0/0:20,0:20:36.12:0,36,795	0/1:18,0:18:18.30:18,0,241	0/0:15,0:14:15.08:0,15,243	0/0:17,0:18:11.78:0,12,224	0/0:26,0:26:41.87:0,42,760	0/0:11,0:20:9.44:0,9,174	1/1:14,4:23:1.31:157,1,0	1/1:27,13:40:15.05:236,15,0	0/1:17,1:18:26.56:27,0,209	0/0:12,0:13:26.75:0,27,437	0/0:10,0:12:14.78:0,15,297	0/0:11,0:11:9.03:0,9,210
chr10	81945904	.	C	CGGAAGTTGAAAGTAAGTCTC	1468.45	PASS	AB=0.783;AC=4;AF=0.67;AN=6;BaseQRankSum=-2.266;DP=18;FS=6.368;HRun=0;HaplotypeScore=78.9247;MQ=217.07;MQ0=0;MQRankSum=-0.429;QD=86.38;ReadPosRankSum=1.041;VQSLOD=2.7660;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:7,1:10:86.28:1094,0,86	0/1:4,0:5:13.71:376,0,14	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:1,0:1:3.01:67,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	81946649	.	CT	C	4540.49	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=10.619;DP=543;FS=8.450;HRun=9;HaplotypeScore=65.1219;InbreedingCoeff=0.8645;MQ=76.89;MQ0=0;MQRankSum=-1.460;QD=18.76;ReadPosRankSum=0.686;VQSLOD=4.9953;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:16:39.94:0,40,222	0/1:9,0:9:0.35:0,0,250	0/0:16,0:16:6.98:0,7,214	0/1:14,0:14:29.34:29,0,115	0/0:25,0:26:78.04:0,78,860	1/1:0,23:23:54.03:494,54,0	0/0:10,0:10:24.07:0,24,277	1/1:6,22:28:66.02:604,66,0	1/1:1,14:15:27.01:247,27,0	0/0:23,0:23:57.17:0,57,655	0/0:25,0:25:60.18:0,60,692	1/1:0,17:17:36.02:329,36,0	0/0:20,0:20:54.11:0,54,585	0/0:10,0:10:30.09:0,30,344	0/0:13,0:13:30.09:0,30,346	0/0:7,0:8:24.07:0,24,275	0/0:23,0:24:63.02:0,63,707	0/0:13,0:13:33.10:0,33,381	1/1:5,19:24:56.99:511,57,0	1/1:3,27:30:74.90:667,75,0	0/0:5,0:5:15.03:0,15,163	0/0:23,1:24:35.68:0,36,643	1/1:4,35:40:85.65:774,86,0	1/1:0,10:10:27.01:247,27,0	0/0:28,0:28:78.22:0,78,892	0/0:26,0:26:63.19:0,63,726	1/1:2,29:32:70.91:637,71,0	0/0:14,0:14:42.06:0,42,442
chr10	81947343	.	ACC	A	4456.21	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=5.135;DP=529;FS=0.000;HRun=10;HaplotypeScore=76.0588;InbreedingCoeff=0.9504;MQ=82.04;MQ0=1;MQRankSum=1.000;QD=25.03;ReadPosRankSum=4.988;VQSLOD=4.6153;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:51.13:0,51,739	0/0:10,0:10:27.05:0,27,374	0/0:22,0:22:35.74:0,36,429	0/0:14,0:14:12.04:0,12,185	0/0:14,0:14:33.07:0,33,455	1/1:6,29:35:74.23:834,74,0	0/0:25,0:26:59.65:0,60,859	0/0:9,0:9:6.49:0,6,84	1/1:2,19:21:34.29:549,34,0	0/0:8,0:8:18.05:0,18,264	0/0:12,0:12:18.05:0,18,264	1/1:2,24:26:63.16:702,63,0	0/0:4,0:21:48.26:0,48,186	0/0:1,0:16:29.94:0,30,103	0/0:23,0:23:54.15:0,54,791	0/0:13,0:13:30.10:0,30,474	0/0:27,0:29:74.19:0,74,1055	0/0:11,0:12:35.61:0,36,527	1/1:3,10:13:27.05:301,27,0	1/1:0,15:15:33.06:368,33,0	0/0:32,0:32:80.70:0,81,1127	0/0:4,1:19:4.08:0,4,100	1/1:4,15:19:39.09:433,39,0	1/1:1,23:24:57.14:635,57,0	0/0:17,0:17:33.06:0,33,432	0/0:13,0:15:29.06:0,29,376	1/1:5,20:24:57.14:634,57,0	0/0:9,0:9:18.04:0,18,262
chr10	81947695	.	A	AT	655	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.600;DP=601;FS=2.785;HRun=9;HaplotypeScore=86.8428;InbreedingCoeff=0.9930;MQ=76.97;MQ0=0;MQRankSum=-1.468;QD=23.39;ReadPosRankSum=-0.074;VQSLOD=4.1486;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:28:69.15:750,69,0	0/0:12,0:12:26.98:0,27,234	0/0:13,0:13:29.97:0,30,255	0/0:14,0:14:29.89:0,30,246	0/0:19,0:19:47.97:0,48,417	0/0:32,0:32:77.97:0,78,677	0/0:18,0:18:44.98:0,45,391	0/0:27,0:27:77.95:0,78,668	0/0:21,0:21:56.99:0,57,495	0/0:23,0:23:56.96:0,57,491	0/0:11,0:11:23.99:0,24,208	0/0:22,0:22:62.12:0,62,545	0/0:18,0:18:41.98:0,42,365	0/0:24,0:24:71.99:0,72,625	0/0:22,0:22:62.97:0,63,543	0/0:21,0:21:59.97:0,60,517	0/0:22,0:22:56.98:0,57,495	0/0:11,0:11:32.97:0,33,282	0/0:10,0:10:29.97:0,30,253	0/0:27,0:27:77.96:0,78,672	0/0:37,0:37:92.95:0,93,807	0/0:21,0:21:53.95:0,54,461	0/0:21,0:21:53.95:0,54,461	0/0:18,0:18:50.95:0,51,434	0/0:24,0:24:68.98:0,69,599	0/0:44,1:45:80.83:0,81,928	0/0:31,0:31:86.90:0,87,737	0/0:9,0:9:23.99:0,24,208
chr10	81950698	.	T	TA	4713.53	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.385;DP=465;FS=6.710;HRun=1;HaplotypeScore=60.0671;InbreedingCoeff=0.9955;MQ=96.31;MQ0=0;MQRankSum=-3.011;QD=39.61;ReadPosRankSum=2.646;VQSLOD=5.4964;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.27:0,90,1152	0/0:7,0:7:18.06:0,18,234	0/0:28,0:28:78.24:0,78,999	0/0:20,0:19:54.13:0,54,657	0/0:25,0:25:75.24:0,75,974	1/1:1,13:14:36.12:540,36,0	0/0:14,0:14:39.13:0,39,506	0/0:31,0:31:93.27:0,93,1168	1/1:0,14:14:42.14:630,42,0	0/0:25,0:25:72.23:0,72,924	0/0:6,0:6:18.06:0,18,233	1/1:1,14:15:39.13:585,39,0	0/0:14,0:14:42.14:0,42,545	0/0:15,0:15:45.15:0,45,584	0/0:15,0:15:45.15:0,45,584	0/0:18,0:18:54.18:0,54,701	0/0:19,0:19:57.19:0,57,740	0/0:7,0:7:18.06:0,18,234	1/1:2,13:15:42.14:623,42,0	1/1:1,18:19:51.17:764,51,0	0/0:21,0:21:63.20:0,63,818	0/0:14,0:14:42.14:0,42,545	1/1:0,11:11:30.10:448,30,0	1/1:1,17:18:45.15:675,45,0	0/0:15,0:15:39.09:0,39,476	0/0:13,0:13:39.13:0,39,507	1/1:0,13:13:29.98:450,30,0	0/0:9,0:9:27.09:0,27,351
chr10	81951086	.	TG	T	14903.66	PASS	AB=0.772;AC=54;AF=0.964;AN=56;BaseQRankSum=-4.533;DP=573;FS=0.000;HRun=6;HaplotypeScore=140.6466;InbreedingCoeff=-0.0374;MQ=76.84;MQ0=0;MQRankSum=-3.183;QD=26.01;ReadPosRankSum=3.856;VQSLOD=2.9711;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:69.13:728,69,0	1/1:1,9:10:24.06:258,24,0	0/1:11,5:14:69.17:144,0,69	0/1:12,5:18:71.29:148,0,71	1/1:2,28:30:69.08:723,69,0	1/1:2,22:24:63.16:676,63,0	1/1:2,14:16:33.08:354,33,0	1/1:4,28:32:81.13:841,81,0	1/1:1,15:16:42.11:451,42,0	1/1:0,22:22:66.10:686,66,0	1/1:0,19:19:54.14:579,54,0	1/1:1,19:20:54.14:580,54,0	1/1:1,15:16:42.10:450,42,0	1/1:4,22:26:57.98:656,58,0	1/1:1,25:26:66.17:709,66,0	1/1:3,23:26:63.16:676,63,0	1/1:1,11:12:33.08:354,33,0	1/1:2,19:21:54.14:580,54,0	1/1:1,22:23:66.17:708,66,0	1/1:7,21:28:47.15:642,47,0	1/1:3,11:14:33.01:330,33,0	1/1:0,22:22:63.16:677,63,0	1/1:1,21:22:60.08:629,60,0	1/1:1,8:9:21.05:225,21,0	1/1:0,11:11:30.08:322,30,0	1/1:2,24:26:75.06:779,75,0	1/1:5,27:32:69.17:740,69,0	1/1:0,8:8:24.06:258,24,0
chr10	81951231	.	A	AG	7398.81	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-15.109;DP=543;FS=6.602;HRun=1;HaplotypeScore=50.7965;InbreedingCoeff=0.9899;MQ=80.26;MQ0=0;MQRankSum=-0.291;QD=40.21;ReadPosRankSum=1.982;VQSLOD=5.3170;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.20:0,60,779	0/0:10,0:10:30.10:0,30,389	0/0:18,0:17:42.80:0,43,451	0/0:15,0:15:45.10:0,45,545	0/0:23,0:23:66.21:0,66,857	1/1:1,17:18:51.17:764,51,0	0/0:13,0:13:39.11:0,39,489	0/0:34,0:34:99:0,99,1243	1/1:0,24:24:69.23:1033,69,0	0/0:22,0:22:60.19:0,60,779	0/0:19,0:19:54.16:0,54,687	1/1:1,13:14:30.10:450,30,0	0/0:15,0:15:42.14:0,42,545	0/0:11,0:11:30.10:0,30,390	0/0:24,0:24:69.21:0,69,882	0/0:19,1:20:9.20:0,9,615	0/0:20,0:20:54.16:0,54,687	0/0:17,0:17:45.15:0,45,581	1/1:1,23:24:63.20:925,63,0	1/1:1,30:31:90.30:1349,90,0	0/0:12,0:12:36.07:0,36,447	0/0:12,0:12:30.10:0,30,390	1/1:0,28:28:75.25:1124,75,0	1/1:0,17:17:48.16:719,48,0	0/0:23,0:22:69.22:0,69,895	0/0:21,0:21:57.18:0,57,740	1/1:0,28:28:69.23:1034,69,0	0/0:8,0:8:24.08:0,24,312
chr10	81954333	.	A	AGT	1808.29	PASS	AB=0.911;AC=25;AF=0.481;AN=52;BaseQRankSum=4.829;DP=793;FS=24.716;HRun=0;HaplotypeScore=140.9762;InbreedingCoeff=0.4015;MQ=67.30;MQ0=15;MQRankSum=-1.586;QD=4.16;ReadPosRankSum=-3.566;VQSLOD=0.4071;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:44:22.73:0,23,112	0/0:8,0:8:8.98:0,9,87	./.	./.	0/0:25,0:25:29.66:0,30,274	1/1:21,0:25:7.78:76,8,0	0/0:34,1:35:2.62:0,3,405	0/1:35,0:34:18.60:106,0,19	1/1:13,0:19:5.02:28,5,0	0/1:31,1:35:31:31,0,104	0/0:16,0:16:8.87:0,9,71	1/1:21,0:26:11.71:99,12,0	0/1:20,4:23:36.37:261,0,36	0/1:20,7:27:37.69:332,0,38	0/1:31,2:33:0.18:0,0,412	0/0:27,0:28:32.87:0,33,320	0/0:28,0:35:53.59:0,54,511	0/1:23,1:23:12.72:13,0,337	1/1:14,0:18:24:228,24,0	1/1:23,14:40:14.73:187,15,0	0/0:35,0:33:12.24:0,12,299	1/1:16,7:23:11.75:180,12,0	1/1:12,0:15:7.94:48,8,0	1/1:29,0:31:16.42:149,16,0	0/1:22,2:24:12.26:12,0,275	0/0:31,0:30:27.05:0,27,284	1/1:16,0:29:26.94:241,27,0	0/0:13,0:13:20.99:0,21,202
chr10	81954425	.	AGT	A	936.26	PASS	AB=0.927;AC=12;AF=0.222;AN=54;BaseQRankSum=2.586;DP=699;FS=1.257;HRun=0;HaplotypeScore=108.8013;InbreedingCoeff=0.5089;MQ=58.50;MQ0=8;MQRankSum=4.059;QD=4.70;ReadPosRankSum=1.860;VQSLOD=2.6185;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:30.10:0,30,442	0/0:13,0:13:15.03:0,15,207	1/1:35,0:15:2.37:8,2,0	./.	0/0:26,1:28:8.32:0,8,520	0/0:20,0:19:39.11:0,39,441	0/0:32,2:33:5.27:0,5,484	0/0:36,0:35:38.54:0,39,431	0/0:19,0:18:27.08:0,27,318	0/1:35,3:37:41.84:42,0,636	0/0:15,0:15:24.07:0,24,329	0/0:19,1:20:8.81:0,9,433	1/1:9,12:21:38.94:419,39,0	1/1:10,12:23:41.95:453,42,0	0/0:30,0:30:48.08:0,48,625	0/1:28,1:29:0.71:1,0,378	0/0:23,0:23:30.71:0,31,583	0/0:20,0:20:42.11:0,42,603	0/0:10,0:10:12.04:0,12,147	0/0:18,0:17:30.07:0,30,323	0/0:27,0:60:23.97:0,24,226	1/1:16,4:20:12.43:122,12,0	0/0:16,0:16:24.07:0,24,283	0/0:33,0:31:54.62:0,55,653	0/1:17,1:17:37.31:37,0,270	0/0:29,1:30:20.02:0,20,636	0/0:13,0:13:21.06:0,21,254	0/1:11,0:13:10.24:10,0,165
chr10	81954510	.	C	CTG	7618.60	PASS	AB=1.000;AC=17;AF=0.370;AN=46;BaseQRankSum=-11.200;DP=583;FS=0.361;HRun=0;HaplotypeScore=89.0146;InbreedingCoeff=0.7835;MQ=58.30;MQ0=18;MQRankSum=2.125;QD=32.01;ReadPosRankSum=-0.767;VQSLOD=6.3255;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,43:46:99:1785,105,0	0/0:15,0:15:36.12:0,36,468	0/1:19,0:10:12.03:12,0,112	0/0:14,0:2:2.60:0,3,10	0/0:29,0:29:63.20:0,63,819	./.	1/1:6,27:33:66.23:1122,66,0	1/1:5,27:26:72.25:1218,72,0	1/1:6,0:5:3:29,3,0	0/0:36,0:35:84.04:0,84,1022	0/0:23,0:23:57.17:0,57,722	./.	1/1:1,26:27:63.22:1072,63,0	1/1:3,32:34:87.28:1450,87,0	0/0:38,0:38:96.30:0,96,1234	0/0:21,0:21:54.16:0,54,687	0/0:15,0:14:39.13:0,39,506	0/0:19,0:19:24.30:0,24,563	0/1:4,0:1:0:0,0,0	./.	0/0:66,0:66:99:0,138,2002	1/1:3,24:26:21.48:930,21,0	./.	0/1:4,0:2:0:0,0,0	0/0:21,0:20:29.33:0,29,603	0/0:32,0:32:87.28:0,87,1131	./.	0/0:7,0:7:14.89:0,15,139
chr10	81954624	.	C	CTG	1189.47	PASS	AB=0.918;AC=19;AF=0.339;AN=56;BaseQRankSum=2.611;DP=749;FS=18.176;HRun=0;HaplotypeScore=139.6791;InbreedingCoeff=0.4587;MQ=53.42;MQ0=22;MQRankSum=-3.601;QD=4.00;ReadPosRankSum=-3.449;VQSLOD=0.9539;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:56:64.58:0,65,923	0/0:5,0:5:12.01:0,12,128	0/1:46,0:8:13.54:14,0,27	0/1:38,0:10:10.42:10,0,62	0/0:21,0:22:29.91:0,30,325	1/1:9,0:10:5.95:47,6,0	0/1:17,18:31:29.75:659,0,30	1/1:29,0:27:23.95:220,24,0	0/1:14,0:12:0.37:46,0,0	0/0:37,0:37:26.33:0,26,519	0/0:18,0:18:24.07:0,24,284	1/1:16,0:17:4.45:49,4,0	0/0:28,1:28:6.52:0,7,521	0/0:37,0:38:62.28:0,62,706	0/0:39,0:40:89.16:0,89,1002	0/0:37,0:39:74.61:0,75,761	0/0:21,0:20:40.72:0,41,524	0/0:18,0:21:35.77:0,36,383	0/1:9,0:10:1.66:84,0,2	0/1:15,0:18:0.48:0,0,1	0/0:62,2:64:45.86:0,46,1405	0/0:24,0:24:20:0,20,289	1/1:13,0:15:2.99:25,3,0	1/1:14,0:15:6.41:43,6,0	0/0:24,0:24:45.09:0,45,516	0/1:29,1:29:20.54:21,0,240	1/1:13,0:13:14.93:146,15,0	0/0:10,0:10:6.01:0,6,71
chr10	81954645	.	TAG	T	767.47	PASS	AB=0.872;AC=12;AF=0.214;AN=56;BaseQRankSum=3.058;DP=765;FS=23.912;HRun=0;HaplotypeScore=132.2890;InbreedingCoeff=0.2610;MQ=52.55;MQ0=31;MQRankSum=-2.322;QD=5.02;ReadPosRankSum=-6.058;VQSLOD=-0.6497;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:53:99:0,107,2008	0/0:8,0:8:23.72:0,24,351	0/0:66,0:9:12.08:0,12,318	0/0:47,2:9:5.87:0,6,169	0/0:22,0:20:31.77:0,32,838	1/1:11,0:11:4.39:101,4,0	0/0:30,0:28:68.32:0,68,629	0/0:21,0:17:19.67:0,20,424	0/1:11,5:13:75.78:144,0,76	0/0:34,0:34:73.36:0,73,1571	0/0:15,5:20:42.14:0,42,779	0/1:15,3:19:18.44:100,0,18	0/0:37,0:35:87.59:0,88,1354	0/0:33,0:32:66.95:0,67,1369	0/0:40,1:41:99:0,110,1883	0/1:34,0:34:20.51:21,0,1239	0/0:25,0:24:48.75:0,49,1015	0/0:22,0:22:47.09:0,47,923	0/1:10,3:11:99:126,0,143	0/1:15,2:19:21.36:170,0,21	0/0:63,0:62:99:0,166,3101	0/0:31,0:31:52.06:0,52,1187	1/1:12,4:15:5.99:71,6,0	1/1:11,1:12:9.03:121,9,0	0/0:25,0:25:71.91:0,72,1281	0/0:24,0:24:72.21:0,72,1277	0/1:10,1:11:67.99:68,0,188	0/0:5,0:5:15.05:0,15,292
chr10	81954658	.	G	GGT	3160.54	PASS	AB=0.765;AC=24;AF=0.429;AN=56;BaseQRankSum=-3.187;DP=743;FS=1.561;HRun=0;HaplotypeScore=120.5277;InbreedingCoeff=0.4753;MQ=53.77;MQ0=39;MQRankSum=-0.576;QD=9.43;ReadPosRankSum=0.746;VQSLOD=3.5902;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,31:47:47.88:1073,48,0	0/0:9,0:9:4.09:0,4,216	0/0:66,0:9:2.15:0,2,29	0/0:52,0:7:5.21:0,5,22	0/1:21,1:21:8.67:9,0,361	1/1:6,1:13:2.79:17,3,0	0/1:22,0:24:6.97:68,0,7	1/1:22,0:18:0.62:37,1,0	1/1:10,0:10:2.74:12,3,0	0/0:37,0:38:53.88:0,54,592	0/0:17,0:17:30.02:0,30,328	1/1:14,1:18:6.19:39,6,0	0/1:13,15:27:77.82:525,0,78	1/1:14,14:28:29.27:665,29,0	0/0:32,0:34:53.72:0,54,599	0/0:21,0:22:35.82:0,36,388	0/0:23,1:25:14.68:0,15,573	0/0:21,0:22:50.96:0,51,569	0/1:17,0:13:23.90:41,0,24	1/1:12,0:12:3.22:13,3,0	0/0:64,0:62:99:0,99,1119	1/1:13,19:33:18.73:732,19,0	0/1:12,1:20:0:0,0,0	0/1:3,0:16:0:0,0,0	0/0:22,0:22:36.10:0,36,425	0/0:30,0:30:12.82:0,13,560	1/1:4,0:9:11.94:106,12,0	0/0:5,0:5:12.04:0,12,143
chr10	81954687	.	ATG	A	667.81	PASS	AB=0.933;AC=3;AF=0.054;AN=56;BaseQRankSum=2.695;DP=677;FS=0.000;HRun=0;HaplotypeScore=116.9012;InbreedingCoeff=0.6228;MQ=56.50;MQ0=11;MQRankSum=-1.242;QD=16.29;ReadPosRankSum=-3.625;VQSLOD=2.6122;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:90.26:0,90,1418	0/0:12,0:12:33.08:0,33,505	0/0:43,2:11:22.57:0,23,314	0/0:48,0:15:38.24:0,38,585	0/0:20,0:20:51.16:0,51,822	0/0:17,0:17:18.06:0,18,280	0/0:19,0:18:33.11:0,33,520	1/1:5,22:25:60.18:758,60,0	0/0:13,0:12:24.08:0,24,405	0/0:33,0:33:90.31:0,90,1502	0/0:20,0:20:54.17:0,54,863	0/1:13,1:14:14.46:14,0,324	0/0:27,0:26:69.22:0,69,1109	0/0:26,0:25:54.18:0,54,845	0/0:30,0:30:80.47:0,80,1274	0/0:23,0:23:57.19:0,57,948	0/0:26,0:26:57.19:0,57,938	0/0:26,0:26:65.68:0,66,1075	0/0:15,0:14:33.10:0,33,495	0/0:14,0:13:30.10:0,30,501	0/0:48,0:47:99:0,114,1799	0/0:31,0:31:65.82:0,66,1017	0/0:15,0:14:12.04:0,12,199	0/0:25,0:25:23.93:0,24,393	0/0:17,0:17:45.15:0,45,734	0/0:30,0:30:87.29:0,87,1438	0/0:10,0:10:13.44:0,13,195	0/0:7,0:7:21:0,21,240
chr10	81954766	.	AGT	A	86.47	PASS	AB=0.995;AC=10;AF=0.179;AN=56;BaseQRankSum=6.173;DP=732;FS=11.708;HRun=0;HaplotypeScore=124.1426;InbreedingCoeff=0.2357;MQ=57.43;MQ0=15;MQRankSum=2.278;QD=0.53;ReadPosRankSum=2.233;VQSLOD=1.7960;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:26:42.72:81,0,43	0/0:16,0:16:24.53:0,25,343	0/0:28,0:10:8.39:0,8,87	0/1:30,1:13:6.37:6,0,94	0/0:26,0:27:24.68:0,25,762	0/0:22,0:22:18.03:0,18,185	1/1:16,0:14:5.41:25,5,0	0/0:24,0:22:0.88:0,1,2	0/1:24,0:23:30.34:30,0,157	0/0:31,0:32:50.87:0,51,883	0/0:29,0:29:57.18:0,57,849	0/0:26,0:26:23.88:0,24,209	0/0:21,1:22:15.81:0,16,684	0/0:34,0:34:25.11:0,25,918	0/0:27,0:27:31.86:0,32,690	0/0:28,0:28:31.01:0,31,909	0/0:30,2:32:38.68:0,39,994	0/0:26,0:26:26.62:0,27,691	0/1:15,0:15:8.29:8,0,39	1/1:22,0:22:6.53:22,7,0	0/0:53,0:52:85.86:0,86,1591	0/0:28,1:29:24.82:0,25,790	0/0:19,0:18:11.90:0,12,113	0/0:34,0:34:7.65:0,8,401	0/0:28,0:28:59.68:0,60,870	0/0:33,0:33:28.93:0,29,929	0/1:22,0:22:6.81:41,0,7	0/1:6,0:5:10.52:11,0,82
chr10	81954779	.	GTGTGTGTGTGTA	G	386.15	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=3.284;DP=789;FS=19.301;HRun=0;HaplotypeScore=262.8150;InbreedingCoeff=0.2578;MQ=55.53;MQ0=21;MQRankSum=1.115;QD=3.51;ReadPosRankSum=-3.965;VQSLOD=0.5040;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:43.61:0,44,1961	0/0:16,0:16:30.55:0,31,1285	0/0:36,0:9:8.81:0,9,229	0/0:42,0:14:12.54:0,13,614	0/0:33,0:33:75.22:0,75,3690	0/0:22,0:22:6.13:0,6,999	0/1:18,0:15:4.59:5,0,237	1/1:10,14:21:41.87:415,42,0	0/0:20,0:19:16.13:0,16,1070	0/0:35,0:36:96.21:0,96,4380	0/0:25,0:25:54.05:0,54,2355	0/1:26,0:26:48.63:49,0,1222	0/0:24,0:24:69.20:0,69,3490	0/0:35,0:35:68.67:0,69,3796	0/0:27,0:27:68.76:0,69,2909	0/0:28,0:28:78.25:0,78,3750	0/0:36,0:36:93.78:0,94,4390	0/0:23,0:24:51.71:0,52,2331	0/1:13,0:13:5.08:5,0,302	0/0:26,0:26:15.05:0,15,347	0/0:51,0:50:99:0,111,5179	0/0:30,0:30:75.18:0,75,3420	0/1:29,0:28:34.33:34,0,809	0/0:36,0:36:25.41:0,25,2592	0/0:28,0:28:69.21:0,69,3386	0/0:36,0:36:97.50:0,98,4064	0/0:20,0:20:21.50:0,21,389	0/0:11,0:10:21.05:0,21,729
chr10	81954789	.	GTA	G	2439.29	PASS	AB=0.979;AC=21;AF=0.375;AN=56;BaseQRankSum=7.933;DP=772;FS=42.570;HRun=0;HaplotypeScore=120.9466;InbreedingCoeff=0.5802;MQ=54.71;MQ0=21;MQRankSum=-1.360;QD=7.15;ReadPosRankSum=-6.188;VQSLOD=0.2641;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:29,4:32:56.42:639,56,0	0/0:12,0:12:5.71:0,6,285	0/1:38,0:11:17.99:18,0,136	0/1:52,0:19:56.58:57,0,103	0/0:30,0:30:58.29:0,58,1004	0/1:19,0:19:24.41:53,0,24	1/1:20,0:18:36.33:286,36,0	1/1:20,0:16:44.76:345,45,0	0/1:17,1:17:10.45:178,0,10	0/0:36,0:36:99:0,107,1325	0/0:27,0:27:65.95:0,66,858	1/1:24,0:24:13.55:196,14,0	0/0:25,0:24:61.10:0,61,966	0/0:33,0:33:31.32:0,31,1068	0/0:29,0:28:22.10:0,22,842	0/0:29,0:29:73.28:0,73,1200	0/0:37,0:37:66.88:0,67,1141	0/0:23,0:23:33.89:0,34,684	1/1:10,0:10:26.54:179,27,0	1/1:27,0:27:14.80:99,15,0	0/0:48,0:47:76.35:0,76,1477	0/0:30,0:30:72.35:0,72,1094	1/1:24,0:23:5.77:161,6,0	0/1:34,2:36:28.76:280,0,29	0/0:25,0:25:53.14:0,53,999	0/0:37,0:37:51.99:0,52,1217	1/1:19,0:19:20.56:151,21,0	0/0:10,0:9:9.08:0,9,184
chr10	81954808	.	T	TGA	1830.89	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.229;DP=729;FS=48.425;HRun=0;HaplotypeScore=129.6412;InbreedingCoeff=0.9769;MQ=63.13;MQ0=10;MQRankSum=-3.076;QD=11.66;ReadPosRankSum=-0.001;VQSLOD=1.6089;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.40:0,81,677	0/0:8,0:8:17.93:0,18,245	0/0:45,0:28:75.20:0,75,909	0/0:52,0:29:80.92:0,81,1030	0/0:30,0:30:78.15:0,78,1002	1/1:5,12:17:8.81:89,9,0	0/0:23,0:22:48.13:0,48,378	0/0:24,0:21:36.31:0,36,289	1/1:15,0:15:12.69:99,13,0	0/0:39,0:39:99:0,109,1429	0/0:19,0:19:51.12:0,51,670	1/1:16,3:19:25.81:325,26,0	0/0:29,0:28:78.06:0,78,1000	0/0:28,0:28:64.76:0,65,923	0/0:31,0:30:90.14:0,90,1104	0/0:26,0:26:78.22:0,78,1085	0/0:29,0:29:75.93:0,76,1066	0/0:18,0:18:50.66:0,51,568	1/1:12,0:12:32.52:250,33,0	1/1:27,0:27:22.59:154,23,0	0/0:36,0:35:80.99:0,81,1064	0/0:43,0:43:99:0,123,1431	1/1:0,18:18:12.04:222,12,0	1/1:26,7:34:63.93:767,64,0	0/0:23,0:23:63.15:0,63,844	0/0:32,0:32:84.20:0,84,1090	1/1:15,0:15:24.46:129,24,0	0/0:7,0:7:21.03:0,21,283
chr10	81955789	.	T	TC	11038.08	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-8.942;DP=631;FS=0.299;HRun=2;HaplotypeScore=64.9648;InbreedingCoeff=0.9968;MQ=92.26;MQ0=0;MQRankSum=-2.309;QD=43.29;ReadPosRankSum=-0.261;VQSLOD=4.1922;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:41.35:630,41,0	0/0:5,0:5:15.05:0,15,210	0/0:26,0:26:75.22:0,75,1026	0/0:29,0:29:81.45:0,81,1134	0/0:22,0:22:66.14:0,66,849	1/1:0,28:28:78.27:1247,78,0	1/1:0,21:21:54.18:863,54,0	1/1:0,35:35:99:1623,105,0	1/1:1,23:24:66.22:1043,66,0	0/0:25,0:25:75.23:0,75,1028	0/0:34,0:34:93.29:0,93,1270	1/1:0,21:21:57.19:911,57,0	0/0:23,0:23:66.19:0,66,884	0/0:23,1:24:24.27:0,24,905	0/0:23,0:23:69.22:0,69,944	0/0:24,1:25:24.27:0,24,911	0/0:18,0:18:51.17:0,51,713	0/0:9,0:9:24.02:0,24,295	1/1:2,12:14:36.11:550,36,0	1/1:1,25:26:69.23:1103,69,0	0/0:18,0:18:51.17:0,51,706	0/0:29,0:29:87.29:0,87,1217	1/1:0,20:20:57.19:910,57,0	1/1:1,15:16:39.13:624,39,0	0/0:26,0:26:75.25:0,75,1047	0/0:29,0:29:84.27:0,84,1154	1/1:0,34:34:96.33:1534,96,0	0/0:11,0:11:33.08:0,33,425
chr10	81957533	.	G	GA	5813.41	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=3.456;DP=691;FS=4.448;HRun=7;HaplotypeScore=73.0318;InbreedingCoeff=0.9710;MQ=81.70;MQ0=0;MQRankSum=-2.044;QD=28.64;ReadPosRankSum=2.031;VQSLOD=5.6879;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.12:0,84,806	0/0:14,0:14:39.06:0,39,377	0/0:21,0:21:50.42:0,50,462	0/0:17,0:17:47.75:0,48,445	0/0:39,0:39:99:0,111,1072	1/1:3,27:30:75.23:906,75,0	0/0:19,0:19:45.07:0,45,433	0/0:32,0:32:90.12:0,90,859	1/1:2,24:26:60.18:725,60,0	0/0:37,0:37:96.15:0,96,927	0/0:23,0:23:60.09:0,60,579	1/1:1,31:32:81.25:978,81,0	0/0:24,0:24:69.11:0,69,666	0/0:24,0:24:63.09:0,63,603	0/0:25,0:25:72.09:0,72,684	0/0:32,0:32:90.13:0,90,863	0/0:25,0:25:69.11:0,69,666	0/0:10,0:10:30.05:0,30,290	1/1:3,11:14:33.10:398,33,0	1/1:4,29:33:78.21:927,78,0	0/0:33,0:33:93.12:0,93,886	0/0:24,0:24:63.08:0,63,603	1/1:3,18:21:50.99:615,51,0	1/1:3,14:17:42.13:507,42,0	0/0:29,0:29:81.06:0,81,765	0/0:28,0:28:84.14:0,84,811	1/1:7,23:29:63.19:757,63,0	0/0:1,0:1:3:0,3,29
chr10	81958173	.	G	GGAGAGTCATTGA	16816.11	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-6.995;DP=610;FS=4.037;HRun=0;HaplotypeScore=187.7559;InbreedingCoeff=0.9888;MQ=76.45;MQ0=0;MQRankSum=-14.345;QD=101.30;ReadPosRankSum=-0.134;VQSLOD=4.8744;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,4958	0/0:13,0:13:36.11:0,36,1213	0/0:27,0:27:69.21:0,69,1920	0/0:11,0:11:21.07:0,21,766	0/0:23,0:23:54.16:0,54,1666	1/1:3,12:18:39.13:2299,39,0	0/0:26,0:26:75.26:0,75,2575	0/0:15,0:14:39.11:0,39,1301	1/1:10,10:23:54.19:2807,54,0	0/0:15,0:15:39.13:0,39,1402	0/0:11,0:11:30.10:0,30,1051	1/1:3,10:18:39.13:2349,39,0	0/0:21,0:21:63.20:0,63,2191	0/0:28,0:28:81.25:0,81,2684	0/0:25,0:25:69.23:0,69,2405	0/0:28,0:28:81.26:0,81,2800	0/0:32,0:32:81.28:0,81,2672	0/0:9,0:9:27.09:0,27,1000	1/1:10,6:27:69.18:2556,69,0	1/1:8,10:21:48.16:2194,48,0	0/0:19,0:19:54.17:0,54,1852	0/0:26,0:26:69.21:0,69,2196	1/1:7,8:23:41.91:2095,42,0	1/1:2,2:10:9.03:546,9,0	0/0:28,0:28:78.27:0,78,2812	0/0:29,0:29:87.29:0,87,2998	1/1:6,8:26:38.80:1970,39,0	0/0:8,0:8:23.57:0,24,785
chr10	81958382	.	GT	G	4777.64	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.924;DP=673;FS=1.064;HRun=9;HaplotypeScore=72.2181;InbreedingCoeff=0.9976;MQ=78.91;MQ0=2;MQRankSum=-1.305;QD=22.54;ReadPosRankSum=3.252;VQSLOD=5.7178;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:81.23:0,81,924	0/0:8,0:8:24.07:0,24,277	0/0:23,0:21:30.20:0,30,401	0/0:23,0:21:27.26:0,27,373	0/0:29,0:29:84.23:0,84,947	1/1:0,21:21:54.03:493,54,0	0/0:20,0:20:51.07:0,51,543	0/0:40,0:40:99:0,105,1187	1/1:5,24:29:66.03:604,66,0	0/0:30,0:30:75.21:0,75,852	0/0:26,0:26:72.17:0,72,800	1/1:2,23:25:34.42:569,34,0	0/0:18,0:18:53.92:0,54,571	0/0:25,0:26:72.02:0,72,797	0/0:22,0:22:63.15:0,63,713	0/0:17,0:17:17.75:0,18,457	0/0:20,0:20:54.16:0,54,622	0/0:15,0:14:39.12:0,39,450	1/1:4,21:25:63.01:570,63,0	1/1:5,30:35:86.98:788,87,0	0/0:16,0:16:39.10:0,39,440	0/0:30,0:30:84.20:0,84,931	1/1:1,19:20:51.03:466,51,0	1/1:2,19:21:51.02:467,51,0	0/0:31,0:30:78.20:0,78,880	0/0:25,0:25:63.15:0,63,695	1/1:1,35:36:90.05:823,90,0	0/0:10,0:10:24.06:0,24,267
chr10	81960179	.	T	TCACA	1682.09	PASS	AB=0.886;AC=20;AF=0.435;AN=46;BaseQRankSum=-4.082;DP=556;FS=6.689;HRun=0;HaplotypeScore=108.6216;InbreedingCoeff=0.6593;MQ=64.41;MQ0=12;MQRankSum=2.319;QD=7.65;ReadPosRankSum=1.088;VQSLOD=2.1607;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:23:19.07:0,19,191	./.	./.	./.	0/0:21,0:24:33.07:0,33,432	1/1:15,4:24:3.01:71,3,0	0/0:7,0:11:6.01:0,6,55	0/0:17,0:17:2.99:0,3,24	1/1:7,9:19:23.55:448,24,0	1/1:18,0:25:0.48:98,0,0	1/1:5,0:14:8.46:45,8,0	1/1:10,7:21:26.83:573,27,0	1/1:5,0:18:20.68:89,21,0	1/1:12,0:13:8.68:53,9,0	0/0:20,0:22:30.96:0,31,409	0/0:19,0:19:30.09:0,30,445	0/0:17,0:18:24.07:0,24,354	0/1:9,0:9:4.52:5,0,128	./.	0/0:18,0:30:21.02:0,21,193	0/0:10,0:11:12.03:0,12,168	0/1:19,0:27:13.94:25,0,14	1/1:11,4:16:5.78:141,6,0	1/1:15,13:34:17.53:307,18,0	0/0:21,0:23:20.98:0,21,236	0/0:16,0:16:6:0,6,53	0/0:11,0:24:30.03:0,30,279	./.
chr10	81960687	.	T	TA	817.61	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.374;DP=505;FS=2.619;HRun=7;HaplotypeScore=47.7081;InbreedingCoeff=0.9825;MQ=77.05;MQ0=0;MQRankSum=0.558;QD=26.37;ReadPosRankSum=-2.134;VQSLOD=3.3905;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:33.04:0,33,318	0/0:10,0:10:24.03:0,24,232	0/0:14,0:14:29.86:0,30,265	0/0:12,0:12:25.50:0,25,217	0/0:33,0:33:93.15:0,93,898	0/0:31,0:31:81.10:0,81,776	0/0:11,0:11:30.05:0,30,290	1/1:7,24:31:78.18:912,78,0	0/0:10,0:10:27.04:0,27,261	0/0:26,0:26:69.09:0,69,660	0/0:29,0:29:84.13:0,84,811	0/0:20,0:20:54.07:0,54,515	0/0:17,0:17:45.07:0,45,434	0/0:20,0:20:57.07:0,57,540	0/0:9,0:9:21.02:0,21,203	0/0:13,0:13:36.05:0,36,344	0/0:20,0:20:48.05:0,48,457	0/0:10,0:10:21.02:0,21,203	0/0:11,0:11:27.02:0,27,251	0/0:22,0:22:63.08:0,63,601	0/0:14,0:14:39.06:0,39,377	0/0:17,0:17:42.05:0,42,402	0/0:21,0:21:57.09:0,57,550	0/0:10,0:10:24.03:0,24,232	0/0:21,0:21:54.08:0,54,521	0/0:25,0:25:72.11:0,72,695	0/0:25,0:25:63.07:0,63,601	0/0:10,0:10:30.05:0,30,290
chr10	81962552	.	T	TTTGTTG	3544.07	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.451;DP=653;FS=9.187;HRun=0;HaplotypeScore=165.3873;InbreedingCoeff=0.9245;MQ=57.78;MQ0=1;MQRankSum=-7.383;QD=35.44;ReadPosRankSum=-1.163;VQSLOD=2.2871;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:29:41.99:0,42,739	0/0:7,0:7:11.97:0,12,205	0/0:25,0:17:6.02:0,6,80	0/0:26,0:19:17.76:0,18,201	0/0:40,0:40:72.22:0,72,1411	0/0:26,0:26:39.02:0,39,946	0/0:14,0:14:14.58:0,15,108	0/0:31,0:31:27.75:0,28,343	0/0:16,0:16:30.10:0,30,593	0/0:24,0:24:45.14:0,45,815	0/0:24,0:24:30.09:0,30,562	0/0:21,0:21:45.10:0,45,898	0/0:20,0:20:33.09:0,33,564	0/0:14,0:15:27.08:0,27,518	0/0:16,0:16:30.09:0,30,541	0/0:22,0:23:57.19:0,57,1132	0/0:31,0:31:60.19:0,60,1164	0/0:7,0:7:10.59:0,11,189	1/1:19,2:23:31.67:533,32,0	1/1:24,8:40:65.77:1378,66,0	0/0:11,0:11:15.05:0,15,309	0/0:25,0:25:48.16:0,48,946	0/0:26,0:25:51.12:0,51,929	0/0:21,0:21:33.02:0,33,768	0/0:34,0:34:48.15:0,48,950	0/0:25,0:25:45.15:0,45,862	1/1:23,9:36:73.81:1634,74,0	0/0:16,0:16:36.12:0,36,741
chr10	81962585	.	A	ATTT	7991.77	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=8.652;DP=615;FS=3.604;HRun=3;HaplotypeScore=112.8177;InbreedingCoeff=0.9859;MQ=68.51;MQ0=5;MQRankSum=-3.675;QD=31.34;ReadPosRankSum=-1.535;VQSLOD=2.2351;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.02:0,72,1013	0/0:5,0:5:12.04:0,12,190	0/0:19,0:13:33.06:0,33,429	0/0:25,0:20:45.70:0,46,686	0/0:32,0:32:93.28:0,93,1405	1/1:27,0:27:74.81:648,75,0	1/1:1,18:19:15.05:309,15,0	1/1:33,0:33:89.19:1198,89,0	1/1:13,0:13:10.90:146,11,0	0/0:28,0:28:77.90:0,78,1170	0/0:24,0:24:66.22:0,66,998	1/1:19,0:19:45.81:335,46,0	0/0:17,0:17:39.08:0,39,550	0/0:14,0:14:42.12:0,42,619	0/0:22,0:22:63.21:0,63,976	0/0:20,0:20:60.19:0,60,931	0/0:25,0:25:72.21:0,72,1107	0/0:6,0:6:18.03:0,18,256	1/1:5,19:24:66.02:1143,66,0	1/1:22,12:34:95.97:1645,96,0	0/0:12,0:12:36.11:0,36,534	0/0:22,0:22:66.21:0,66,1019	1/1:26,0:25:63.04:459,63,0	1/1:20,0:20:44.39:333,44,0	0/0:25,0:25:75.26:0,75,1177	0/0:19,0:19:54.16:0,54,814	1/1:30,9:39:99:1775,112,0	0/0:19,0:19:51.12:0,51,832
chr10	81963242	.	G	GTTCTCTCTTACCGTCAAC	2965.35	PASS	AB=0.861;AC=37;AF=0.925;AN=40;BaseQRankSum=1.970;DP=286;FS=38.244;HRun=0;HaplotypeScore=220.4804;InbreedingCoeff=-0.0620;MQ=82.68;MQ0=0;MQRankSum=-3.360;QD=13.36;ReadPosRankSum=1.932;VQSLOD=0.9342;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:14:5.51:81,6,0	./.	0/1:13,0:14:25.50:369,0,25	0/1:10,1:11:80.97:305,0,81	1/1:11,0:13:3.01:61,3,0	./.	1/1:5,0:9:9.03:191,9,0	1/1:5,0:11:27.09:573,27,0	1/1:6,0:8:2.98:21,3,0	1/1:7,0:13:16.59:136,17,0	1/1:5,0:10:3.90:52,4,0	./.	./.	1/1:9,0:13:5.93:40,6,0	./.	1/1:9,0:12:3.01:57,3,0	./.	./.	1/1:2,0:8:14.64:286,15,0	0/1:7,0:11:0:0,0,0	1/1:6,0:9:6.45:92,6,0	1/1:4,0:7:2.98:21,3,0	1/1:11,0:15:8.64:56,9,0	./.	1/1:9,0:12:2.98:21,3,0	1/1:7,0:9:19.88:417,20,0	1/1:16,0:19:3.01:81,3,0	1/1:0,0:4:6.02:200,6,0
chr10	81963243	.	T	TTCTCAGAATGGCAGTTGAAGG	9404.11	PASS	AB=0.811;AC=44;AF=0.957;AN=46;BaseQRankSum=0.695;DP=254;FS=53.597;HRun=0;HaplotypeScore=179.3383;InbreedingCoeff=-0.0604;MQ=82.38;MQ0=0;MQRankSum=-3.870;QD=42.36;ReadPosRankSum=2.858;VQSLOD=2.0584;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:6.02:378,6,0	./.	0/1:8,1:13:29.31:994,0,29	0/1:8,0:9:84.65:85,0,87	1/1:11,0:11:3.01:114,3,0	1/1:19,0:19:3.01:81,3,0	1/1:8,0:8:12.93:608,13,0	1/1:7,0:7:18.06:1270,18,0	1/1:6,0:6:2.98:21,3,0	1/1:11,0:11:24.08:1152,24,0	1/1:9,0:9:9.03:445,9,0	1/1:9,0:9:2.94:18,3,0	./.	1/1:13,0:13:5.93:40,6,0	./.	./.	1/1:4,0:4:3.01:116,3,0	./.	1/1:7,0:7:15.05:900,15,0	1/1:9,0:9:3.01:149,3,0	1/1:7,0:7:12:640,12,0	1/1:7,0:7:5.99:136,6,0	1/1:14,0:14:8.97:196,9,0	1/1:5,0:5:2.98:21,3,0	1/1:11,0:11:5.99:123,6,0	1/1:9,0:9:21.07:1375,21,0	1/1:18,0:18:0.47:1,0,0	1/1:4,0:4:6.02:541,6,0
chr10	81965064	.	A	AG	1654.52	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.114;DP=732;FS=5.590;HRun=4;HaplotypeScore=72.1433;InbreedingCoeff=0.9987;MQ=82.63;MQ0=0;MQRankSum=-4.153;QD=29.03;ReadPosRankSum=2.957;VQSLOD=3.9360;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,49:57:99:1749,129,0	0/0:18,0:18:54.13:0,54,600	0/0:20,0:20:44.57:0,45,529	0/0:20,0:20:54.04:0,54,592	0/0:21,0:21:54.15:0,54,612	0/0:20,0:20:60.17:0,60,679	0/0:24,0:24:63.16:0,63,704	0/0:39,0:39:84.23:0,84,952	0/0:30,0:30:84.19:0,84,922	0/0:27,0:27:75.20:0,75,842	0/0:14,0:14:36.10:0,36,408	0/0:15,0:15:39.11:0,39,442	0/0:31,0:31:81.13:0,81,890	0/0:41,0:41:99:0,102,1145	0/0:35,0:35:96.26:0,96,1079	0/0:25,0:25:72.19:0,72,807	0/0:27,0:27:78.20:0,78,872	0/0:16,0:16:45.09:0,45,496	0/0:24,0:24:66.18:0,66,742	0/0:28,0:28:69.16:0,69,763	0/0:41,0:41:99:0,108,1213	0/0:14,0:14:39.10:0,39,434	0/0:23,0:23:66.19:0,66,747	0/0:36,0:36:96.27:0,96,1089	0/0:26,0:26:78.22:0,78,885	0/0:22,0:22:63.18:0,63,715	0/0:29,0:28:84.21:0,84,933	0/0:9,0:9:27.08:0,27,306
chr10	81966560	.	GTGTGA	G	2646.83	PASS	AB=0.987;AC=40;AF=0.741;AN=54;BaseQRankSum=0.686;DP=363;FS=5.181;HRun=0;HaplotypeScore=108.4952;InbreedingCoeff=0.2634;MQ=33.71;MQ0=26;MQRankSum=0.045;QD=8.25;ReadPosRankSum=2.371;VQSLOD=2.1134;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:22:11.09:91,11,0	1/1:7,0:6:1.64:32,2,0	./.	0/0:3,0:1:2.97:0,3,20	0/0:9,0:8:0:0,0,0	1/1:9,0:7:7.06:62,7,0	1/1:13,0:14:5.66:30,6,0	1/1:14,0:14:42.12:500,42,0	1/1:7,0:6:5.73:52,6,0	1/1:19,0:18:37.90:511,38,0	0/0:8,0:7:0:0,0,0	1/1:11,0:8:2.24:38,2,0	1/1:8,2:10:11.57:129,12,0	0/0:3,8:10:0:0,0,0	1/1:30,0:28:17.28:162,17,0	1/1:20,1:19:18.01:175,18,0	0/1:17,0:14:11.85:208,0,12	0/1:8,0:7:7.83:69,0,8	1/1:4,0:3:2.99:23,3,0	1/1:19,0:17:7.20:65,7,0	1/1:20,0:15:9.01:90,9,0	0/1:17,0:18:0:0,0,0	1/1:15,0:15:2.01:6,2,0	1/1:14,0:12:4.50:11,5,0	0/1:15,0:15:35.42:35,0,114	1/1:13,0:13:27.06:313,27,0	1/1:12,0:12:13.35:167,13,0	0/0:10,0:8:6.01:0,6,62
chr10	81966562	.	GTGA	G	2734.96	PASS	AB=0.969;AC=42;AF=0.778;AN=54;BaseQRankSum=0.496;DP=353;FS=14.481;HRun=0;HaplotypeScore=101.0311;InbreedingCoeff=0.3822;MQ=33.62;MQ0=23;MQRankSum=0.267;QD=8.71;ReadPosRankSum=2.290;VQSLOD=2.2587;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:21:11.57:91,12,0	1/1:5,2:6:2.66:47,3,0	./.	0/0:3,0:1:2.97:0,3,20	0/0:9,0:8:0:0,0,0	1/1:9,0:7:7.44:51,7,0	1/1:12,0:12:6.56:31,7,0	1/1:14,0:14:42.12:501,42,0	1/1:7,0:6:5.81:50,6,0	1/1:17,1:18:40.66:565,41,0	0/0:3,4:6:0:0,0,0	1/1:11,0:8:2.54:22,3,0	1/1:10,0:10:11.85:126,12,0	0/0:11,0:10:0.47:0,0,1	1/1:26,2:28:17.28:162,17,0	1/1:21,1:20:18.01:195,18,0	1/1:17,0:14:19.24:218,19,0	1/1:7,1:7:8.99:108,9,0	1/1:4,0:3:2.99:23,3,0	1/1:19,0:17:7.26:65,7,0	1/1:18,0:15:9.01:90,9,0	0/1:18,0:18:0.12:0,0,0	1/1:14,0:14:3.11:8,3,0	1/1:14,0:12:4.14:11,4,0	0/1:14,0:15:35.59:36,0,45	1/1:13,0:13:29.15:316,29,0	1/1:11,0:11:13.24:132,13,0	0/0:8,0:6:5.81:0,6,33
chr10	81966564	.	GA	G	2551.96	PASS	AB=0.909;AC=44;AF=0.917;AN=48;BaseQRankSum=-0.927;DP=347;FS=4.305;HRun=2;HaplotypeScore=95.9948;InbreedingCoeff=0.3260;MQ=34.42;MQ0=22;MQRankSum=1.697;QD=8.00;ReadPosRankSum=1.032;VQSLOD=1.1656;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,4:21:11.93:92,12,0	1/1:6,1:6:3.01:31,3,0	./.	0/0:3,0:1:2.97:0,3,20	./.	1/1:9,0:7:7.43:41,7,0	1/1:9,2:12:6.79:32,7,0	1/1:0,13:14:42.12:501,42,0	1/1:3,0:6:3:30,3,0	1/1:8,9:18:48.03:518,48,0	./.	1/1:5,0:8:2.80:19,3,0	1/1:8,2:10:12.01:124,12,0	0/1:10,0:10:0:0,0,0	1/1:18,13:30:17.97:163,18,0	1/1:20,2:20:17.97:170,18,0	1/1:8,6:11:19.18:184,19,0	1/1:8,0:7:9.01:82,9,0	1/1:2,0:3:2.99:23,3,0	1/1:13,0:16:7.57:65,8,0	1/1:16,0:14:9.01:89,9,0	0/1:14,0:18:0:0,0,0	1/1:5,0:15:3.11:8,3,0	1/1:8,0:10:4.33:11,4,0	1/1:14,1:15:5.99:47,6,0	1/1:11,1:12:30.05:318,30,0	1/1:6,0:11:13.41:94,13,0	./.
chr10	81966565	.	A	AG	2769.15	PASS	AB=0.765;AC=42;AF=0.875;AN=48;BaseQRankSum=-1.173;DP=328;FS=4.323;HRun=1;HaplotypeScore=94.5565;InbreedingCoeff=0.3649;MQ=34.77;MQ0=19;MQRankSum=1.695;QD=9.23;ReadPosRankSum=1.099;VQSLOD=1.3755;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,12:21:12.04:187,12,0	1/1:5,0:4:2.94:18,3,0	./.	0/0:3,0:1:2.94:0,3,18	./.	1/1:7,2:7:5.63:39,6,0	1/1:10,0:10:2.28:17,2,0	1/1:14,0:14:41.73:334,42,0	1/1:4,2:6:3.48:47,3,0	1/1:13,4:16:47.60:439,48,0	./.	1/1:8,2:7:2.85:37,3,0	1/1:5,0:10:10.86:94,11,0	0/1:8,0:9:0:0,0,0	1/1:21,10:31:18.04:260,18,0	1/1:4,17:20:17.87:222,18,0	1/1:7,5:10:20.81:201,21,0	1/1:2,5:6:9.01:118,9,0	1/1:5,0:3:2.99:23,3,0	1/1:13,5:16:9.03:113,9,0	1/1:4,14:15:9.03:139,9,0	0/1:6,11:17:0:0,0,0	0/1:11,2:13:0:0,0,0	0/1:6,4:9:0.20:0,0,0	1/1:2,10:12:6.02:94,6,0	1/1:1,10:11:31.56:363,32,0	1/1:7,3:10:13.66:112,14,0	./.
chr10	81966585	.	G	GAA	1140.02	PASS	AB=0.906;AC=17;AF=0.304;AN=56;BaseQRankSum=4.714;DP=516;FS=9.958;HRun=1;HaplotypeScore=126.1035;InbreedingCoeff=0.4631;MQ=43.49;MQ0=14;MQRankSum=-3.800;QD=6.20;ReadPosRankSum=0.751;VQSLOD=-0.7603;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:8.99:0,9,98	0/0:10,0:10:6.73:0,7,36	0/0:17,0:3:8.95:0,9,83	0/0:40,0:11:6.11:0,6,67	0/0:17,0:16:8.79:0,9,73	1/1:9,8:16:18.61:205,19,0	0/0:12,0:12:8.88:0,9,85	0/0:32,0:32:85.82:0,86,601	1/1:5,12:17:14.88:134,15,0	0/0:20,0:20:52.98:0,53,423	0/0:9,0:9:5.95:0,6,44	1/1:9,5:12:9.02:136,9,0	0/0:14,0:14:8.96:0,9,80	0/0:17,0:17:5.39:0,5,49	0/0:34,0:33:18.73:0,19,174	0/1:27,0:26:26.90:27,0,86	0/0:10,0:8:5.54:0,6,74	0/1:8,0:8:8.44:8,0,48	0/1:9,1:8:22.49:98,0,22	1/1:13,4:17:23.38:221,23,0	0/0:21,0:20:28.35:0,28,202	0/0:22,0:22:2.73:0,3,25	1/1:12,5:17:17.87:134,18,0	0/1:9,14:21:3.94:64,0,4	0/0:16,0:16:16.19:0,16,149	0/1:16,0:16:9.24:9,0,182	1/1:11,7:18:16.88:287,17,0	0/0:13,0:12:10.23:0,10,76
chr10	81967756	.	A	ACAGTATAG	11654.55	PASS	AB=0.955;AC=17;AF=0.304;AN=56;BaseQRankSum=-6.550;DP=594;FS=1.411;HRun=0;HaplotypeScore=170.1067;InbreedingCoeff=0.9089;MQ=78.58;MQ0=0;MQRankSum=-13.138;QD=65.48;ReadPosRankSum=0.579;VQSLOD=4.4687;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:63.22:0,63,1681	0/0:10,0:10:27.09:0,27,732	0/0:29,0:29:64.12:0,64,1726	0/0:25,0:23:52.76:0,53,1116	0/0:18,0:18:48.16:0,48,1272	1/1:3,12:15:27.05:1051,27,0	0/0:25,0:25:57.20:0,57,1495	0/0:30,0:30:82.46:0,82,1841	1/1:7,7:16:21.07:810,21,0	0/0:24,0:24:60.19:0,60,1571	0/0:21,0:21:57.20:0,57,1459	1/1:9,10:20:41.86:1547,42,0	0/0:19,0:19:39.13:0,39,1056	0/0:17,0:17:33.09:0,33,828	0/0:24,0:24:72.25:0,72,1883	0/1:20,1:21:76.11:76,0,1143	0/0:24,0:23:54.19:0,54,1451	0/0:23,0:23:63.22:0,63,1677	1/1:15,4:19:39.06:1218,39,0	1/1:8,13:21:33.11:1354,33,0	0/0:28,0:28:66.23:0,66,1781	0/0:15,0:15:42.14:0,42,1137	1/1:6,22:30:66.22:2733,66,0	1/1:6,7:13:21.07:847,21,0	0/0:25,0:25:66.23:0,66,1790	0/0:25,0:25:60.21:0,60,1573	1/1:7,12:22:47.93:2017,48,0	0/0:4,0:4:12.04:0,12,297
chr10	81967779	.	G	GGTTT	2251.19	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-0.324;DP=579;FS=1.438;HRun=0;HaplotypeScore=160.9473;InbreedingCoeff=0.9718;MQ=71.57;MQ0=2;MQRankSum=-7.272;QD=32.16;ReadPosRankSum=-1.341;VQSLOD=3.1141;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,15:27:42.14:1008,42,0	0/0:11,0:11:28.31:0,28,430	0/0:46,0:33:50.18:0,50,728	0/0:42,0:31:65.86:0,66,970	0/0:22,0:22:57.18:0,57,933	0/0:12,0:12:21.03:0,21,324	1/1:21,1:22:42.14:982,42,0	1/1:18,3:21:21.02:403,21,0	0/0:11,0:11:33.11:0,33,546	0/0:23,0:23:54.15:0,54,796	0/0:32,0:32:87.25:0,87,1409	0/0:20,0:20:45.15:0,45,759	0/0:15,0:15:45.15:0,45,750	0/0:12,0:12:21.07:0,21,355	0/0:19,0:19:57.20:0,57,961	0/0:19,0:19:42.14:0,42,709	0/0:25,0:24:51.16:0,51,824	0/0:22,0:22:51.63:0,52,829	0/0:18,0:18:33.10:0,33,532	0/0:26,0:26:72.19:0,72,1142	0/0:21,0:21:30.10:0,30,506	0/0:14,0:14:33.11:0,33,557	0/0:26,0:26:45.02:0,45,667	0/0:7,0:7:18.06:0,18,290	0/0:21,0:21:51.16:0,51,835	0/0:24,0:24:57.20:0,57,962	0/0:18,0:17:39.02:0,39,629	0/0:3,0:3:9.03:0,9,152
chr10	81967795	.	T	TG	145.31	PASS	AB=0.978;AC=4;AF=0.071;AN=56;BaseQRankSum=5.878;DP=533;FS=1.532;HRun=0;HaplotypeScore=139.4210;InbreedingCoeff=0.4410;MQ=68.54;MQ0=2;MQRankSum=-5.324;QD=2.42;ReadPosRankSum=-0.515;VQSLOD=2.6844;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:22.62:23,0,74	0/0:11,0:11:33.08:0,33,432	0/0:40,0:29:68.76:0,69,900	0/0:38,0:28:68.76:0,69,994	0/0:24,0:24:69.16:0,69,916	0/0:8,0:8:21.07:0,21,284	1/1:8,10:18:25.36:193,25,0	0/1:21,1:22:44.18:44,0,58	0/0:12,0:12:36.11:0,36,480	0/0:24,0:24:72.19:0,72,928	0/0:31,0:31:93.26:0,93,1257	0/0:17,0:17:51.17:0,51,691	0/0:19,0:19:57.15:0,57,755	0/0:9,0:9:21.07:0,21,293	0/0:20,0:20:60.20:0,60,839	0/0:16,0:16:48.15:0,48,648	0/0:22,0:22:63.18:0,63,845	0/0:23,0:23:63.66:0,64,856	0/0:14,0:14:42.13:0,42,558	0/0:29,0:29:87.16:0,87,1152	0/0:14,0:14:36.12:0,36,498	0/0:13,0:13:39.04:0,39,500	0/0:21,0:21:48.01:0,48,601	0/0:8,0:8:18.06:0,18,231	0/0:19,0:19:57.19:0,57,795	0/0:22,0:22:63.20:0,63,864	0/0:16,0:15:42.11:0,42,560	0/0:3,0:3:9.03:0,9,125
chr10	81967796	.	T	TG	1030.45	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.157;DP=526;FS=18.924;HRun=7;HaplotypeScore=136.1018;InbreedingCoeff=0.9234;MQ=68.48;MQ0=2;MQRankSum=-6.849;QD=25.13;ReadPosRankSum=-4.827;VQSLOD=0.9161;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:40.23:0,40,240	0/0:10,0:10:27.02:0,27,251	0/0:39,1:29:27.61:0,28,466	0/0:37,0:27:54.64:0,55,471	0/0:23,0:23:53.99:0,54,503	0/0:8,0:8:15.02:0,15,145	1/1:3,6:19:48.14:553,48,0	1/1:9,12:22:54.08:599,54,0	0/0:12,0:12:33.04:0,33,314	0/0:22,0:22:63.06:0,63,597	0/0:31,0:31:84.05:0,84,795	0/0:17,0:17:45.06:0,45,431	0/0:19,0:19:48.01:0,48,448	0/0:9,0:9:21.03:0,21,203	0/0:20,0:20:60.10:0,60,579	0/0:17,0:17:42.05:0,42,401	0/0:21,0:21:54.06:0,54,514	0/0:22,0:22:57.04:0,57,541	0/0:13,0:13:39.05:0,39,372	0/0:29,0:29:81.11:0,81,776	0/0:14,0:14:33.05:0,33,318	0/0:13,0:13:32.92:0,33,296	0/0:21,0:21:42:0,42,392	0/0:8,0:8:11.97:0,12,106	0/0:19,0:19:45.07:0,45,434	0/0:22,0:22:50.56:0,51,473	0/0:16,0:15:39.06:0,39,375	0/0:3,0:3:6.01:0,6,58
chr10	81967817	.	AT	A	11874.12	PASS	AB=0.819;AC=54;AF=0.964;AN=56;BaseQRankSum=-4.809;DP=490;FS=1.285;HRun=7;HaplotypeScore=94.3939;InbreedingCoeff=-0.0389;MQ=70.17;MQ0=1;MQRankSum=-3.853;QD=24.23;ReadPosRankSum=4.496;VQSLOD=4.8603;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:17:39.05:385,39,0	1/1:1,8:9:24.05:245,24,0	0/1:21,7:19:60.94:150,0,61	0/1:25,6:21:27.17:130,0,27	1/1:3,17:20:54.12:550,54,0	1/1:1,7:8:21.04:213,21,0	1/1:3,12:15:32.81:335,33,0	1/1:0,27:27:81.18:825,81,0	1/1:0,11:11:33.07:336,33,0	1/1:3,21:24:66.14:670,66,0	1/1:7,27:34:84.09:835,84,0	1/1:3,15:18:48.10:485,48,0	1/1:1,13:14:42.09:427,42,0	1/1:0,13:13:33.07:336,33,0	1/1:3,18:21:48.11:490,48,0	1/1:1,14:15:42.09:428,42,0	1/1:1,19:20:54.12:550,54,0	1/1:1,20:21:60.14:612,60,0	1/1:1,19:20:57.13:581,57,0	1/1:4,23:27:69.16:703,69,0	1/1:1,10:11:27.06:275,27,0	1/1:2,7:9:21.05:214,21,0	1/1:1,16:17:39.09:396,39,0	1/1:1,6:7:18.04:183,18,0	1/1:1,14:15:42.10:428,42,0	1/1:0,21:21:63.14:642,63,0	1/1:3,10:13:33.04:327,33,0	1/1:0,4:4:12.03:122,12,0
chr10	81967824	.	TC	T	2871.66	PASS	AB=0.974;AC=47;AF=0.839;AN=56;BaseQRankSum=0.036;DP=498;FS=9.094;HRun=1;HaplotypeScore=124.6895;InbreedingCoeff=-0.0066;MQ=72.13;MQ0=2;MQRankSum=-0.568;QD=6.18;ReadPosRankSum=10.107;VQSLOD=-0.7041;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,1:16:7.80:132,0,8	1/1:8,0:8:18.61:63,19,0	0/0:31,0:19:8.15:0,8,122	0/1:34,1:21:34.15:34,0,91	1/1:20,0:20:1.77:102,2,0	1/1:7,0:7:17.46:67,17,0	1/1:15,1:16:4.74:109,5,0	1/1:30,0:30:8.17:155,8,0	1/1:12,0:12:7.27:113,7,0	0/1:24,1:25:15.42:73,0,15	1/1:29,1:30:54.03:251,54,0	1/1:15,2:17:39.78:183,40,0	0/1:15,1:16:2.43:119,0,2	1/1:14,0:14:27.46:129,27,0	1/1:18,0:18:35.55:123,36,0	0/1:17,0:17:30.53:64,0,31	1/1:19,0:19:46.09:212,46,0	1/1:22,0:22:33.45:173,33,0	1/1:21,0:21:7.26:90,7,0	1/1:23,0:23:55.86:209,56,0	1/1:11,0:11:1.91:40,2,0	0/1:11,0:11:36.75:37,0,71	1/1:18,0:18:7.01:121,7,0	1/1:6,0:6:16.52:82,17,0	1/1:14,0:14:29.41:86,29,0	1/1:22,0:22:6.29:57,6,0	1/1:10,2:12:31.84:167,32,0	0/1:5,0:5:6.56:19,0,7
chr10	81967843	.	T	TG	1510.49	PASS	AB=0.934;AC=11;AF=0.196;AN=56;BaseQRankSum=4.206;DP=599;FS=26.828;HRun=0;HaplotypeScore=132.2398;InbreedingCoeff=0.4231;MQ=70.46;MQ0=8;MQRankSum=-5.118;QD=10.28;ReadPosRankSum=1.110;VQSLOD=2.0309;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:77.21:0,77,534	0/0:10,0:10:27.07:0,27,345	0/0:62,0:21:35.31:0,35,269	0/0:47,0:25:19.83:0,20,238	0/0:27,0:27:63.53:0,64,714	0/1:12,1:13:37.68:94,0,38	0/0:12,0:12:32.74:0,33,241	0/0:25,0:25:74.23:0,74,584	1/1:16,0:16:16.85:213,17,0	0/0:32,0:31:76.92:0,77,885	0/0:32,0:32:69.97:0,70,1008	0/1:16,1:17:8.77:182,0,9	0/0:20,0:20:33.18:0,33,358	0/0:12,0:12:19.20:0,19,178	0/0:20,0:20:45.08:0,45,506	0/0:15,0:15:45.11:0,45,551	0/0:23,0:23:47.70:0,48,637	0/0:20,0:20:57.61:0,58,718	0/1:17,0:17:24.88:198,0,25	1/1:36,6:41:37.89:631,38,0	0/0:8,0:8:10.03:0,10,276	0/0:13,0:13:15.07:0,15,147	0/1:17,3:20:30.56:183,0,31	1/1:8,1:9:9.39:85,9,0	0/0:13,0:13:33.08:0,33,404	0/0:23,0:23:68.31:0,68,761	0/1:12,1:13:62.20:88,0,62	0/0:9,0:9:26.66:0,27,309
chr10	81967850	.	TTTTTG	T	1541.64	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=0.083;DP=603;FS=5.163;HRun=0;HaplotypeScore=169.0165;InbreedingCoeff=-0.0008;MQ=67.65;MQ0=9;MQRankSum=-3.794;QD=4.55;ReadPosRankSum=-9.940;VQSLOD=-0.1258;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:99:140,0,158	0/0:11,0:11:30.06:0,30,596	0/1:61,0:20:8.86:9,0,241	0/1:46,0:24:37.57:38,0,88	0/0:27,0:27:63.13:0,63,1282	0/1:13,0:13:3.55:4,0,160	1/1:12,0:12:28.26:233,28,0	1/1:17,10:27:72.93:868,73,0	0/0:14,0:14:17.07:0,17,200	0/0:34,0:33:67.48:0,67,1370	0/0:33,0:33:72.10:0,72,1869	0/1:18,0:18:37.04:130,0,37	0/1:18,0:18:4.46:4,0,562	0/1:12,0:12:2.65:3,0,366	0/0:18,0:18:32.79:0,33,756	0/0:15,0:15:41.96:0,42,852	0/0:23,0:23:56.21:0,56,932	0/0:19,0:19:54.03:0,54,1156	0/1:15,0:15:19.04:19,0,96	0/1:44,0:43:99:120,0,457	0/0:8,0:8:23.95:0,24,446	0/0:15,0:15:45.04:0,45,662	0/1:18,0:18:36.46:36,0,221	0/1:9,0:9:34.31:34,0,55	0/0:15,0:15:39.07:0,39,788	0/0:23,0:23:64.58:0,65,1107	0/1:16,0:16:68.61:69,0,116	0/0:9,0:9:23.85:0,24,417
chr10	81967853	.	TTG	T	3492.72	PASS	AB=0.994;AC=26;AF=0.464;AN=56;BaseQRankSum=4.883;DP=597;FS=6.562;HRun=0;HaplotypeScore=130.3686;InbreedingCoeff=0.7505;MQ=67.41;MQ0=8;MQRankSum=-3.518;QD=10.09;ReadPosRankSum=-6.916;VQSLOD=1.3335;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:60.43:481,60,0	0/0:12,0:12:30.01:0,30,356	0/1:61,0:21:6.83:7,0,196	0/1:43,1:22:49.65:50,0,72	0/0:27,0:27:40.15:0,40,548	1/1:12,1:13:19.99:177,20,0	1/1:11,0:11:27.19:191,27,0	1/1:26,0:26:75.77:643,76,0	1/1:13,1:14:17.47:119,17,0	0/0:34,0:33:34.96:0,35,693	0/0:33,0:33:61.94:0,62,948	1/1:18,0:18:46.84:328,47,0	0/1:17,0:17:26.72:27,0,224	0/1:12,0:12:0.10:0,0,171	0/0:20,0:20:38.35:0,38,443	0/0:15,0:15:40.84:0,41,438	0/0:23,0:23:40.12:0,40,489	0/0:18,0:18:53.61:0,54,582	1/1:15,0:15:19.71:186,20,0	1/1:41,2:42:84.83:659,85,0	0/0:8,0:8:23.06:0,23,264	0/0:15,0:15:39.13:0,39,289	1/1:18,0:18:29.85:216,30,0	1/1:9,0:9:12.96:68,13,0	0/0:15,0:15:39.04:0,39,457	0/0:22,0:22:16.68:0,17,462	1/1:16,1:17:48.11:341,48,0	0/0:9,0:9:19.22:0,19,254
chr10	81967854	.	TG	T	4292.31	PASS	AB=0.983;AC=27;AF=0.482;AN=56;BaseQRankSum=5.779;DP=587;FS=10.189;HRun=1;HaplotypeScore=115.2713;InbreedingCoeff=0.6448;MQ=67.89;MQ0=8;MQRankSum=-6.610;QD=12.09;ReadPosRankSum=-5.404;VQSLOD=1.1017;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,1:28:74.68:570,75,0	0/0:12,0:12:29.96:0,30,295	0/1:55,2:20:8.14:8,0,165	0/1:36,2:20:43.48:49,0,43	0/0:27,0:27:31.93:0,32,365	1/1:13,0:13:36.24:252,36,0	1/1:12,0:12:31.15:201,31,0	1/1:26,0:26:77.06:584,77,0	1/1:11,1:12:30.54:189,31,0	0/0:36,0:35:20.51:0,21,579	0/0:33,0:33:48.53:0,49,671	1/1:17,0:17:47.72:376,48,0	0/1:17,0:17:66.55:67,0,129	0/1:12,0:12:8:8,0,108	0/0:19,0:19:35.50:0,35,345	0/0:16,0:16:24.44:0,24,294	0/0:24,0:24:33.60:0,34,363	0/0:18,0:18:47.47:0,47,398	1/1:11,2:13:31.45:253,31,0	1/1:41,2:42:99:888,115,0	0/0:8,0:8:21.90:0,22,210	0/0:15,0:15:16.30:0,16,163	1/1:17,1:18:48.34:317,48,0	1/1:9,0:9:14.82:104,15,0	0/0:15,0:15:38.86:0,39,349	0/1:22,0:22:38.96:39,0,326	1/1:17,0:17:50.70:387,51,0	0/0:9,0:9:7.33:0,7,189
chr10	81967864	.	T	TA	1809.29	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=1.247;DP=508;FS=5.125;HRun=1;HaplotypeScore=111.3643;InbreedingCoeff=0.9889;MQ=77.37;MQ0=6;MQRankSum=-1.263;QD=15.46;ReadPosRankSum=-1.638;VQSLOD=3.0661;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:30.92:0,31,213	0/0:12,0:12:30.05:0,30,355	0/0:51,0:27:43.22:0,43,509	0/0:31,0:18:27.09:0,27,191	0/0:26,0:26:57.11:0,57,664	1/1:12,0:12:23.79:202,24,0	0/0:11,0:11:22.91:0,23,162	0/0:27,0:27:74.58:0,75,596	1/1:9,1:10:11.61:99,12,0	0/0:24,0:24:65.98:0,66,764	0/0:31,0:31:83.93:0,84,928	1/1:10,1:11:21.42:170,21,0	0/0:13,0:13:27.01:0,27,300	0/0:12,0:12:30.03:0,30,319	0/0:22,0:22:36.10:0,36,439	0/0:14,0:14:33.05:0,33,369	0/0:19,0:19:45.02:0,45,508	0/0:17,0:17:36.11:0,36,449	1/1:14,0:14:29.30:227,29,0	1/1:30,1:30:53.59:511,54,0	0/0:7,0:7:18.02:0,18,182	0/0:16,0:16:35.95:0,36,367	1/1:12,2:15:33.41:296,33,0	1/1:9,0:9:17.75:132,18,0	0/0:17,0:17:42.08:0,42,486	0/0:16,0:16:39.09:0,39,454	1/1:12,3:15:44.64:379,45,0	0/0:8,0:8:23.90:0,24,256
chr10	81968032	.	ATCCATCTTC	A	5037.57	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.509;DP=608;FS=4.601;HRun=0;HaplotypeScore=169.1479;InbreedingCoeff=0.9608;MQ=89.01;MQ0=0;MQRankSum=-9.032;QD=57.90;ReadPosRankSum=-1.636;VQSLOD=3.8735;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,19:32:54.18:1528,54,0	0/0:8,0:8:18.06:0,18,850	0/0:26,0:26:49.35:0,49,2443	0/0:22,0:22:54.18:0,54,2226	0/0:21,0:21:57.20:0,57,2479	0/0:19,0:19:39.13:0,39,1626	1/1:0,20:20:51.18:1480,51,0	1/1:8,27:35:81.25:2030,81,0	0/0:20,0:20:54.19:0,54,2446	0/0:34,0:34:93.32:0,93,3934	0/0:23,0:23:69.24:0,69,3184	0/0:18,0:18:45.15:0,45,1998	0/0:29,0:29:81.28:0,81,3591	0/0:30,0:30:87.30:0,87,3838	0/0:25,0:25:69.14:0,69,3164	0/0:16,0:16:42.14:0,42,1933	0/0:32,0:32:72.25:0,72,2956	0/0:18,0:18:51.16:0,51,2096	0/0:25,0:25:66.23:0,66,2986	0/0:11,0:11:33.10:0,33,1291	0/0:38,0:38:93.32:0,93,3894	0/0:11,0:11:33.10:0,33,1336	0/0:17,0:17:48.16:0,48,2084	0/0:13,0:13:39.13:0,39,1697	0/0:15,0:15:39.13:0,39,1723	0/0:31,0:31:90.31:0,90,3999	0/0:17,0:17:48.16:0,48,2136	0/0:2,0:2:6.02:0,6,284
chr10	81969418	.	C	CGATGTGG	2384.82	PASS	AB=0.672;AC=1;AF=0.018;AN=56;BaseQRankSum=-6.017;DP=803;FS=3.627;HRun=0;HaplotypeScore=195.7024;InbreedingCoeff=-0.0182;MQ=58.35;MQ0=12;MQRankSum=-6.308;QD=55.46;ReadPosRankSum=-3.721;VQSLOD=2.9675;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,117,2877	0/0:10,0:10:27.09:0,27,674	0/0:34,0:22:42.46:0,42,1149	0/0:39,0:25:57.19:0,57,1350	0/0:20,0:20:54.14:0,54,1266	0/0:26,0:26:66.23:0,66,1633	0/0:32,0:32:84.29:0,84,2059	0/1:22,20:36:53.85:2459,0,54	0/0:32,0:32:93.30:0,93,2201	0/0:20,0:20:51.17:0,51,1217	0/0:17,0:17:42.14:0,42,1034	0/0:22,0:22:60.21:0,60,1441	0/0:35,0:35:96.29:0,96,2306	0/0:35,0:35:99:0,99,2371	0/0:32,0:32:90.31:0,90,2158	0/0:25,0:25:69.19:0,69,1620	0/0:46,0:46:99:0,123,2877	0/0:29,0:29:72.21:0,72,1738	0/0:36,0:34:84.25:0,84,1976	0/0:21,0:21:51.16:0,51,1209	0/0:53,0:53:99:0,138,3372	0/0:17,0:17:45.15:0,45,1085	0/0:16,0:16:45.15:0,45,1123	0/0:28,0:28:84.22:0,84,1915	0/0:27,0:27:81.28:0,81,2018	0/0:31,0:31:84.28:0,84,2013	0/0:22,0:21:54.19:0,54,1332	0/0:10,0:10:30.10:0,30,732
chr10	81969622	.	T	TTTG	3024.70	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=10.408;DP=679;FS=13.947;HRun=0;HaplotypeScore=129.3222;InbreedingCoeff=0.9738;MQ=60.58;MQ0=3;MQRankSum=-9.918;QD=11.46;ReadPosRankSum=-4.660;VQSLOD=1.0943;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:31:19.41:161,19,0	0/0:16,0:16:45.12:0,45,620	0/0:32,0:25:30.09:0,30,398	0/0:25,0:22:24.09:0,24,320	0/0:26,0:26:63.21:0,63,895	1/1:25,0:25:18.04:215,18,0	1/1:9,13:26:30.10:594,30,0	1/1:31,0:31:62.35:476,62,0	1/1:33,0:33:36.08:433,36,0	0/0:23,0:23:44.97:0,45,595	0/0:15,0:15:30.09:0,30,411	1/1:16,0:16:24.08:307,24,0	0/0:32,0:32:72.21:0,72,1004	0/0:32,0:32:81.23:0,81,1100	0/0:32,0:32:84.27:0,84,1180	0/0:28,0:28:52.24:0,52,865	0/0:20,0:20:54.02:0,54,698	0/0:31,0:31:69.17:0,69,941	1/1:22,0:24:22.77:291,23,0	1/1:23,0:23:20.88:197,21,0	0/0:21,0:21:45.12:0,45,605	0/0:23,0:23:43.43:0,43,620	1/1:11,0:11:11.89:128,12,0	1/1:18,0:19:14.50:156,15,0	0/0:18,0:18:39.13:0,39,555	0/0:38,0:38:75.21:0,75,1044	1/1:23,0:24:23.86:289,24,0	0/0:3,0:3:6.02:0,6,85
chr10	81969644	.	TTGC	T	1547.83	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=12.224;DP=659;FS=10.641;HRun=0;HaplotypeScore=124.1314;InbreedingCoeff=0.9067;MQ=54.90;MQ0=9;MQRankSum=-7.551;QD=7.04;ReadPosRankSum=1.692;VQSLOD=2.5347;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,4:30:15.67:170,16,0	0/0:16,0:16:32.85:0,33,550	0/0:33,0:19:30.02:0,30,530	0/0:32,0:25:30.76:0,31,803	0/0:27,0:27:21.07:0,21,427	1/1:21,1:22:9.75:61,10,0	0/0:28,0:28:60.19:0,60,1175	1/1:18,14:32:28.82:543,29,0	1/1:24,3:27:25.56:175,26,0	0/0:20,0:20:24.07:0,24,418	0/0:11,0:11:18.05:0,18,328	1/1:13,0:13:5.92:16,6,0	0/0:30,0:30:63.18:0,63,1184	0/0:30,0:30:72.22:0,72,1369	0/0:33,0:33:81.25:0,81,1572	0/0:24,1:25:29.66:0,30,1120	0/0:25,0:25:63.09:0,63,1107	0/0:30,0:30:75.21:0,75,1456	1/1:12,11:22:33.08:414,33,0	1/1:17,1:18:7.27:54,7,0	0/0:22,0:22:62.52:0,63,1168	0/0:26,0:26:36.10:0,36,625	1/1:12,1:13:5.04:48,5,0	1/1:17,1:18:6.03:50,6,0	0/0:16,0:16:30.10:0,30,601	0/0:32,0:32:48.15:0,48,937	1/1:20,4:24:16.06:223,16,0	0/0:3,0:3:6.02:0,6,122
chr10	81969646	.	G	GTTGTTGTTGTTGTTA	10336.24	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=10.010;DP=659;FS=13.173;HRun=0;HaplotypeScore=231.0861;InbreedingCoeff=0.8156;MQ=55.78;MQ0=9;MQRankSum=-9.333;QD=41.51;ReadPosRankSum=1.301;VQSLOD=3.0058;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:29:9.51:301,10,0	0/0:17,0:17:51.13:0,51,1643	0/0:37,0:20:47.28:0,47,952	0/0:32,0:25:65.24:0,65,1287	0/0:27,0:27:74.88:0,75,1760	1/1:1,11:25:17.99:1125,18,0	0/0:28,0:28:45.96:0,46,1347	1/1:30,0:30:39.62:647,40,0	1/1:3,13:29:38.96:2199,39,0	0/0:19,0:19:57.15:0,57,1654	0/0:12,0:12:30.09:0,30,1033	1/1:0,12:14:24.08:1762,24,0	0/0:30,0:30:90.08:0,90,2799	0/0:28,0:28:84.27:0,84,3402	0/0:32,0:32:96.32:0,96,3742	0/1:24,0:24:99:119,0,2604	0/0:24,0:24:69.21:0,69,2317	0/0:28,0:28:81.21:0,81,2978	0/1:20,0:20:79.06:851,0,79	1/1:1,9:19:23.85:777,24,0	0/0:22,0:22:66.20:0,66,2196	0/0:24,0:24:62.47:0,62,1600	1/1:2,4:13:12.01:488,12,0	1/1:4,5:19:11.51:470,12,0	0/0:16,0:16:47.94:0,48,1273	0/0:31,0:31:90.29:0,90,2884	1/1:7,7:26:31.98:1597,32,0	0/0:3,0:3:9:0,9,209
chr10	81970919	.	AG	A	5553.27	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.074;DP=599;FS=4.970;HRun=2;HaplotypeScore=75.1688;InbreedingCoeff=0.9930;MQ=56.31;MQ0=16;MQRankSum=3.382;QD=31.20;ReadPosRankSum=0.561;VQSLOD=4.3715;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.28:0,93,1352	0/0:8,0:8:21.07:0,21,315	0/0:24,0:11:30.10:0,30,436	0/0:28,0:14:36.12:0,36,510	0/0:10,0:10:24.08:0,24,355	1/1:0,13:13:39.13:506,39,0	0/0:28,0:28:81.22:0,81,1169	0/0:18,0:16:39.04:0,39,519	1/1:1,19:20:29.23:637,29,0	0/0:15,0:14:30.08:0,30,400	0/0:9,0:9:24.07:0,24,359	1/1:0,26:26:63.20:818,63,0	0/0:30,0:30:78.67:0,79,1124	0/0:25,0:25:72.22:0,72,1039	0/0:20,0:20:54.18:0,54,809	0/0:26,0:26:78.26:0,78,1168	0/0:39,0:39:99:0,114,1709	0/0:29,0:28:84.26:0,84,1235	1/1:3,19:20:48.09:592,48,0	1/1:0,15:15:36.12:467,36,0	0/0:25,0:24:65.48:0,65,968	0/0:11,0:11:27.06:0,27,367	1/1:0,14:14:36.12:467,36,0	1/1:0,43:43:99:1402,108,0	0/0:20,0:20:57.18:0,57,835	0/0:18,0:18:54.17:0,54,775	1/1:3,22:25:51.17:663,51,0	0/0:4,0:4:12.04:0,12,180
chr10	81971334	.	ATT	A	4913.82	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.112;DP=610;FS=8.478;HRun=10;HaplotypeScore=85.9061;InbreedingCoeff=0.9988;MQ=64.63;MQ0=2;MQRankSum=1.396;QD=26.85;ReadPosRankSum=3.930;VQSLOD=4.5209;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:19:32.32:0,32,111	0/0:9,0:9:27.09:0,27,426	0/0:20,0:13:20.78:0,21,264	0/0:19,0:16:33.09:0,33,483	0/0:23,0:23:63.20:0,63,957	1/1:1,16:17:48.13:535,48,0	0/0:25,0:25:57.18:0,57,879	0/0:6,0:31:57.64:0,58,201	1/1:1,23:24:54.14:602,54,0	0/0:23,0:23:63.18:0,63,974	0/0:19,0:19:45.15:0,45,693	1/1:1,24:24:63.17:702,63,0	0/0:27,0:27:66.18:0,66,962	0/0:22,0:22:63.20:0,63,976	0/0:24,0:24:63.19:0,63,956	0/0:17,0:17:48.16:0,48,741	0/0:23,0:23:63.21:0,63,1000	0/0:21,0:22:62.70:0,63,954	1/1:0,9:9:27.02:271,27,0	1/1:1,27:28:72.17:801,72,0	0/0:16,0:16:39.12:0,39,597	0/0:20,0:20:48.15:0,48,728	1/1:0,20:20:44.88:501,45,0	1/1:2,26:28:75.19:834,75,0	0/0:28,0:29:83.75:0,84,1229	0/0:27,0:27:75.24:0,75,1129	1/1:3,29:32:59.92:666,60,0	0/0:12,0:12:33.10:0,33,502
chr10	81971815	.	C	CTGT	1376.70	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.713;DP=670;FS=0.000;HRun=0;HaplotypeScore=90.5309;InbreedingCoeff=0.8803;MQ=82.36;MQ0=0;MQRankSum=-3.226;QD=44.41;ReadPosRankSum=-0.442;VQSLOD=4.8515;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,135,2204	0/0:5,0:5:12.01:0,12,169	0/0:22,0:22:60.16:0,60,887	0/0:18,0:18:47.54:0,48,701	0/0:29,0:29:84.27:0,84,1347	0/0:15,0:15:39.13:0,39,636	1/1:3,25:31:66.23:1471,66,0	0/0:34,0:34:78.27:0,78,1272	0/0:23,0:23:60.18:0,60,953	0/0:23,0:23:69.24:0,69,1127	0/0:14,0:14:42.12:0,42,638	0/0:24,0:24:66.18:0,66,1049	0/0:24,0:24:69.22:0,69,1096	0/0:27,0:27:81.28:0,81,1322	0/0:31,0:31:81.28:0,81,1323	0/0:28,0:28:72.23:0,72,1152	0/0:36,0:36:99:0,99,1617	0/0:19,0:19:48.13:0,48,756	0/0:31,0:31:87.23:0,87,1300	0/0:26,0:26:66.21:0,66,1043	0/0:20,0:20:57.19:0,57,925	0/0:21,0:21:60.19:0,60,955	0/0:16,0:16:48.16:0,48,784	0/0:35,0:35:99:0,105,1690	0/0:15,0:15:42.14:0,42,686	0/0:16,0:16:48.16:0,48,783	0/0:36,0:36:99:0,99,1552	0/0:3,0:2:6.02:0,6,98
chr10	81971969	.	TA	T	368.66	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.244;DP=606;FS=16.862;HRun=8;HaplotypeScore=94.1060;InbreedingCoeff=0.9952;MQ=71.35;MQ0=2;MQRankSum=1.788;QD=19.40;ReadPosRankSum=-0.794;VQSLOD=2.2479;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:54.12:0,54,621	0/0:9,0:9:24.07:0,24,290	0/0:26,0:17:37.92:0,38,379	0/0:35,0:24:44.92:0,45,426	0/0:32,0:32:87.27:0,87,1051	0/0:18,0:18:44.57:0,45,397	1/1:1,18:19:48.08:464,48,0	0/0:23,0:23:58.13:0,58,603	0/0:15,0:15:44.34:0,44,354	0/0:33,0:33:96.27:0,96,1145	0/0:33,0:33:84.26:0,84,1012	0/0:22,0:22:44.48:0,44,388	0/0:11,0:11:27.08:0,27,326	0/0:20,0:20:57.16:0,57,673	0/0:22,0:22:54.17:0,54,652	0/0:19,0:19:51.12:0,51,601	0/0:20,0:20:50.93:0,51,576	0/0:14,0:14:35.60:0,36,406	0/0:20,0:19:42.13:0,42,507	0/0:28,0:28:63.19:0,63,760	0/0:16,0:16:36.11:0,36,435	0/0:24,0:24:66.20:0,66,796	0/0:22,0:22:58.87:0,59,446	0/0:12,0:12:26.15:0,26,259	0/0:28,0:28:75.22:0,75,895	0/0:19,0:19:54.17:0,54,652	0/0:28,0:28:78.24:0,78,941	0/0:14,0:14:42.13:0,42,507
chr10	81971978	.	CAAACAAAAA	C	4335.14	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=9.811;DP=636;FS=12.282;HRun=0;HaplotypeScore=177.8998;InbreedingCoeff=0.8844;MQ=70.63;MQ0=5;MQRankSum=-8.503;QD=29.90;ReadPosRankSum=-0.117;VQSLOD=3.6732;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:99:359,0,120	0/0:10,0:10:30.10:0,30,1160	0/0:35,0:20:31.56:0,32,636	0/0:45,0:29:19.88:0,20,484	0/0:33,0:33:72.25:0,72,3128	1/1:6,11:17:21.06:574,21,0	0/0:20,0:20:45.15:0,45,1191	1/1:17,12:29:33.13:576,33,0	1/1:5,11:16:30.10:820,30,0	0/0:36,0:36:90.31:0,90,3827	0/0:36,0:36:75.26:0,75,3311	1/1:7,15:22:23.64:656,24,0	0/0:10,0:10:21.07:0,21,838	0/0:21,0:21:51.18:0,51,2274	0/0:20,0:20:45.15:0,45,2031	0/0:19,0:19:51.16:0,51,2041	0/0:18,0:19:48.16:0,48,1810	0/0:14,0:14:36.09:0,36,1306	0/0:23,0:21:54.19:0,54,2115	0/0:21,0:21:36.12:0,36,1609	0/0:14,0:14:33.11:0,33,1445	0/0:22,0:22:51.18:0,51,2246	1/1:6,15:21:41.76:1148,42,0	1/1:7,6:13:9.03:201,9,0	0/0:27,0:27:66.23:0,66,2874	0/0:19,0:19:45.15:0,45,1999	0/0:29,0:29:72.25:0,72,2969	0/0:15,0:14:27.09:0,27,1138
chr10	81971983	.	AAAAAAAAC	A	2924.21	PASS	AB=0.942;AC=7;AF=0.125;AN=56;BaseQRankSum=10.047;DP=644;FS=10.771;HRun=0;HaplotypeScore=171.8966;InbreedingCoeff=-0.1332;MQ=71.38;MQ0=6;MQRankSum=-10.278;QD=21.50;ReadPosRankSum=1.648;VQSLOD=2.7470;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,18:26:81.81:754,0,82	0/0:10,0:10:30.10:0,30,1155	0/0:47,0:23:53.62:0,54,831	0/0:52,0:33:18.48:0,18,597	0/0:35,0:35:84.26:0,84,3101	0/1:17,0:17:46.23:352,0,46	0/0:20,0:20:39.62:0,40,828	0/1:25,0:25:99:230,0,202	0/1:15,0:15:41.59:507,0,42	0/0:34,0:34:99:0,99,3733	0/0:37,0:37:99:0,99,3422	0/1:22,0:22:91.99:398,0,92	0/0:11,0:11:30.09:0,30,951	0/0:19,0:19:57.16:0,57,2167	0/0:19,0:19:48.13:0,48,1895	0/0:20,0:20:60.20:0,60,2114	0/0:19,0:19:48.15:0,48,1750	0/0:13,0:13:32.73:0,33,1243	0/0:22,0:20:54.18:0,54,2099	0/0:22,0:22:57.15:0,57,1758	0/0:14,0:14:39.12:0,39,1439	0/0:24,0:24:66.21:0,66,2296	0/1:20,0:20:76.21:707,0,76	0/1:11,0:11:14.62:107,0,15	0/0:26,0:26:72.21:0,72,2734	0/0:19,0:19:57.17:0,57,2052	0/0:30,0:30:81.25:0,81,2937	0/0:15,0:14:30.09:0,30,1111
chr10	81972145	.	G	GC	528.18	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.473;DP=460;FS=5.513;HRun=0;HaplotypeScore=43.1436;InbreedingCoeff=0.8327;MQ=81.37;MQ0=0;MQRankSum=-0.444;QD=35.21;ReadPosRankSum=-0.376;VQSLOD=2.7072;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.23:0,90,1214	0/0:3,0:3:9.03:0,9,126	0/0:13,0:13:39.12:0,39,526	0/0:14,0:14:25.58:0,26,475	0/0:15,0:15:45.15:0,45,625	0/0:15,0:15:39.05:0,39,487	1/1:0,15:15:39.13:623,39,0	0/0:34,0:34:99:0,99,1339	0/0:22,0:22:63.17:0,63,857	0/0:18,0:18:54.17:0,54,738	0/0:3,0:3:9.03:0,9,126	0/0:22,0:22:63.18:0,63,843	0/0:25,0:25:75.22:0,75,1008	0/0:16,0:16:45.11:0,45,573	0/0:15,0:15:42.12:0,42,544	0/0:17,0:17:51.16:0,51,695	0/0:23,0:23:69.23:0,69,964	0/0:11,0:11:33.10:0,33,445	0/0:22,0:22:63.20:0,63,858	0/0:7,0:7:21.06:0,21,278	0/0:25,0:25:75.19:0,75,979	0/0:5,0:5:15.05:0,15,209	0/0:9,0:9:27.09:0,27,377	0/0:18,0:18:54.13:0,54,730	0/0:8,0:8:24.08:0,24,335	0/0:29,0:29:87.22:0,87,1174	0/0:21,0:21:63.14:0,63,852	0/0:3,0:3:9.02:0,9,110
chr10	81972318	.	CT	C	540.63	PASS	AB=0.906;AC=24;AF=0.429;AN=56;BaseQRankSum=2.481;DP=214;FS=0.000;HRun=14;HaplotypeScore=35.2594;InbreedingCoeff=0.5057;MQ=67.32;MQ0=3;MQRankSum=0.911;QD=5.69;ReadPosRankSum=3.669;VQSLOD=1.0491;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,8:9:11.84:82,12,0	1/1:0,1:1:2.98:21,3,0	0/1:6,0:6:5.05:5,0,20	0/0:7,1:7:2.16:0,2,31	0/0:12,1:13:9.43:0,9,76	1/1:0,3:3:5.95:41,6,0	0/0:3,0:3:9.01:0,9,83	1/1:5,6:10:11.84:82,12,0	1/1:5,4:9:5.90:41,6,0	0/0:15,0:15:29.93:0,30,257	0/0:11,0:12:9.01:0,9,84	1/1:5,2:7:5.91:41,6,0	1/1:3,9:12:26.77:185,27,0	1/1:3,3:5:8.90:62,9,0	0/1:5,0:5:4.60:5,0,96	0/0:3,0:3:3:0,3,28	0/0:11,0:10:20.99:0,21,188	0/0:1,0:1:3:0,3,28	0/0:6,1:7:7.82:0,8,61	0/0:9,0:9:8.85:0,9,70	0/0:2,0:2:2.96:0,3,19	1/1:2,5:6:11.89:82,12,0	1/1:3,2:5:5.94:41,6,0	0/1:4,2:6:19.14:32,0,19	0/0:10,0:9:15.01:0,15,136	0/0:9,1:12:12.15:0,12,227	0/0:12,0:13:29.80:0,30,249	0/1:6,1:5:5.57:6,0,95
chr10	81976815	.	T	TACACACACACAC	2982.60	PASS	AB=0.922;AC=28;AF=0.500;AN=56;BaseQRankSum=1.860;DP=764;FS=6.650;HRun=0;HaplotypeScore=272.8987;InbreedingCoeff=0.3107;MQ=64.93;MQ0=13;MQRankSum=-1.747;QD=5.86;ReadPosRankSum=-2.060;VQSLOD=1.5221;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:57.74:79,0,58	0/0:13,0:14:33.02:0,33,932	0/0:44,0:20:2.64:0,3,59	0/1:47,0:26:0.82:1,0,43	0/0:20,0:20:30.63:0,31,1241	1/1:14,0:32:6.02:313,6,0	1/1:17,0:16:18.52:305,19,0	1/1:31,0:29:26.91:264,27,0	1/1:29,0:28:8.01:331,8,0	0/0:36,0:36:27.12:0,27,1199	0/0:18,0:21:44.01:0,44,986	1/1:32,0:32:23.57:560,24,0	0/1:15,0:35:24.56:55,0,25	0/1:11,0:37:53.58:54,0,54	0/0:31,0:32:54.15:0,54,1401	0/0:36,0:37:74.76:0,75,2178	0/1:32,0:33:5.07:5,0,1435	0/1:19,0:22:34.74:35,0,749	1/1:18,0:19:18.52:418,19,0	1/1:18,12:32:2.90:155,3,0	0/0:27,0:26:41.19:0,41,1249	0/0:4,0:23:15.72:0,16,130	0/1:16,0:16:0.59:1,0,1	1/1:23,0:23:14.60:136,15,0	0/1:26,0:31:14.72:15,0,1395	0/1:23,0:23:7.32:7,0,1028	1/1:16,0:16:15.05:418,15,0	0/1:6,0:7:18.47:18,0,195
chr10	81977013	.	AAGGAAAC	A	366.09	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.852;DP=657;FS=3.739;HRun=0;HaplotypeScore=147.8080;InbreedingCoeff=0.9909;MQ=87.67;MQ0=1;MQRankSum=-3.986;QD=21.53;ReadPosRankSum=-0.604;VQSLOD=2.9485;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.24:0,78,2875	0/0:9,0:9:27.09:0,27,1064	0/0:31,0:31:81.22:0,81,2764	0/0:21,0:21:59.85:0,60,1897	0/0:23,0:23:69.19:0,69,2231	0/0:23,0:23:66.23:0,66,2598	1/1:7,10:17:18.06:457,18,0	0/0:34,0:34:96.29:0,96,3004	0/0:21,0:21:63.21:0,63,2366	0/0:39,0:39:99:0,117,4560	0/0:16,0:16:42.14:0,42,1540	0/0:25,0:25:63.22:0,63,2394	0/0:23,0:23:63.22:0,63,2411	0/0:27,0:27:75.26:0,75,2849	0/0:18,0:18:51.18:0,51,2010	0/0:27,0:27:69.24:0,69,2651	0/0:23,0:23:69.23:0,69,2617	0/0:17,0:17:48.12:0,48,1723	0/0:27,0:27:78.27:0,78,2978	0/0:32,0:32:84.29:0,84,3175	0/0:26,0:25:69.24:0,69,2581	0/0:21,0:21:60.21:0,60,2277	0/0:17,0:17:48.16:0,48,1891	0/0:23,0:23:69.21:0,69,2460	0/0:19,0:19:51.18:0,51,2003	0/0:30,0:30:84.29:0,84,3239	0/0:22,0:22:63.21:0,63,2313	0/0:16,0:16:48.16:0,48,1870
chr10	81977789	.	T	TA	4460.47	PASS	AB=0.776;AC=15;AF=0.268;AN=56;BaseQRankSum=0.356;DP=855;FS=300.886;HRun=1;HaplotypeScore=81.6419;InbreedingCoeff=-0.3823;MQ=80.99;MQ0=0;MQRankSum=-6.846;QD=8.63;ReadPosRankSum=0.196;VQSLOD=-0.1472;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,159,2025	0/1:10,4:14:99:132,0,347	0/0:29,0:29:83.48:0,83,949	0/0:16,0:16:45.13:0,45,540	0/1:34,10:44:99:235,0,1191	0/0:20,0:20:54.12:0,54,668	0/0:17,0:17:51.17:0,51,660	0/1:39,29:68:99:1033,0,1184	0/0:25,0:25:50.29:0,50,894	0/1:25,10:35:99:341,0,724	0/1:25,8:33:99:199,0,795	0/0:18,0:18:54.16:0,54,686	0/0:31,0:31:87.18:0,87,1064	0/0:29,0:29:84.23:0,84,1036	0/1:30,4:34:72.91:73,0,1012	0/1:24,7:31:99:171,0,830	0/1:24,9:33:99:132,0,793	0/1:19,3:22:65.20:65,0,642	0/1:23,13:36:99:463,0,704	0/0:27,3:30:0.05:0,0,962	0/1:35,18:53:99:509,0,1157	0/0:28,0:28:84.25:0,84,1072	0/0:22,0:22:60.19:0,60,777	0/0:18,0:18:51.15:0,51,636	0/1:23,8:31:99:252,0,739	0/1:26,16:42:99:501,0,846	0/1:29,8:36:99:235,0,928	0/1:1,3:4:26.85:119,0,27
chr10	81978476	.	CT	C	5364.81	PASS	AB=0.886;AC=25;AF=0.446;AN=56;BaseQRankSum=8.302;DP=611;FS=36.659;HRun=11;HaplotypeScore=66.6851;InbreedingCoeff=0.6956;MQ=76.09;MQ0=0;MQRankSum=-4.388;QD=14.74;ReadPosRankSum=4.072;VQSLOD=2.9226;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,50:53:99:1207,147,0	0/0:9,0:9:27.07:0,27,288	0/1:17,2:17:3.60:4,0,163	0/1:15,1:16:7.53:8,0,238	0/0:19,0:20:47.28:0,47,536	1/1:6,19:25:50.93:419,51,0	0/0:4,0:23:40:0,40,211	1/1:9,21:32:44.94:500,45,0	1/1:3,12:16:35:277,35,0	0/0:19,1:20:23.47:0,23,455	0/0:22,1:25:41.17:0,41,597	1/1:3,17:21:46.98:375,47,0	0/0:23,0:23:63.16:0,63,672	0/0:17,0:17:39.10:0,39,416	0/1:10,3:14:34.91:35,0,257	0/0:24,0:24:69.11:0,69,710	0/1:19,4:23:19.81:20,0,418	0/0:8,1:10:9.66:0,10,250	1/1:4,17:22:52.94:422,53,0	1/1:3,29:32:77.88:640,78,0	0/0:18,0:18:51.11:0,51,534	0/0:23,1:24:23.18:0,23,523	1/1:4,25:30:64.78:523,65,0	1/1:4,20:24:37.95:468,38,0	0/0:14,0:14:36.05:0,36,372	0/0:19,1:20:26.48:0,26,483	1/1:3,24:27:56.92:468,57,0	0/1:9,1:10:0.61:1,0,188
chr10	81978567	.	TG	T	800.60	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.994;DP=593;FS=0.000;HRun=2;HaplotypeScore=55.5592;InbreedingCoeff=0.9441;MQ=76.77;MQ0=0;MQRankSum=-2.554;QD=25.83;ReadPosRankSum=-1.261;VQSLOD=2.9145;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1482	0/0:11,0:11:33.10:0,33,474	0/0:15,0:15:29.28:0,29,387	0/0:8,0:8:9.02:0,9,140	0/0:28,0:28:84.26:0,84,1219	0/0:29,0:29:87.29:0,87,1301	1/1:0,31:31:69.22:895,69,0	0/0:26,0:26:75.25:0,75,1101	0/0:18,0:18:51.17:0,51,762	0/0:23,0:23:69.19:0,69,991	0/0:21,0:21:63.20:0,63,920	0/0:19,0:19:54.17:0,54,787	0/0:23,0:23:50.94:0,51,929	0/0:23,0:23:69.22:0,69,1013	0/0:25,0:25:75.23:0,75,1085	0/0:24,0:24:72.23:0,72,1058	0/0:22,0:22:66.18:0,66,941	0/0:18,0:18:51.17:0,51,764	0/0:17,0:17:48.16:0,48,718	0/0:28,0:28:81.27:0,81,1212	0/0:13,0:13:36.12:0,36,540	0/0:17,0:17:51.17:0,51,763	0/0:20,0:20:57.19:0,57,854	0/0:17,0:17:51.17:0,51,764	0/0:19,0:19:54.18:0,54,808	0/0:19,0:19:54.18:0,54,809	0/0:33,0:32:96.33:0,96,1437	0/0:12,0:12:36.12:0,36,532
chr10	81978870	.	C	CT	2890.95	PASS	AB=0.748;AC=17;AF=0.304;AN=56;BaseQRankSum=-9.959;DP=565;FS=5.590;HRun=11;HaplotypeScore=67.5183;InbreedingCoeff=0.7513;MQ=76.04;MQ0=0;MQRankSum=0.518;QD=14.75;ReadPosRankSum=1.176;VQSLOD=4.2423;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,2:19:19.87:209,20,0	0/1:12,1:13:0.57:1,0,179	0/0:18,0:20:28.52:0,29,226	0/0:12,0:12:21.51:0,22,144	0/0:31,0:33:72.66:0,73,533	1/1:3,25:28:33.88:525,34,0	0/0:1,0:15:28.52:0,29,82	0/0:37,0:39:76.46:0,76,568	1/1:2,17:19:42:413,42,0	0/0:25,0:27:63.80:0,64,476	0/0:20,1:21:16.38:0,16,298	0/1:4,6:11:6.96:108,0,7	0/0:5,0:23:32.58:0,33,94	0/0:2,0:17:26.48:0,26,76	0/0:16,0:18:45.83:0,46,330	0/0:16,2:18:5.36:0,5,225	0/0:25,0:28:71.81:0,72,523	0/0:12,0:12:8.87:0,9,65	0/1:11,8:19:20.28:194,0,20	1/1:4,25:29:33.84:514,34,0	0/0:9,0:9:20.90:0,21,160	0/0:4,0:24:38.69:0,39,112	1/1:1,17:19:41.25:451,41,0	1/1:2,12:14:27.05:274,27,0	0/0:17,1:20:18.46:0,18,306	0/0:29,0:29:62.71:0,63,488	1/1:6,18:25:24.36:400,24,0	0/0:4,0:4:5.94:0,6,43
chr10	81982954	.	CT	C	647.36	PASS	AB=0.846;AC=5;AF=0.089;AN=56;BaseQRankSum=6.341;DP=561;FS=13.295;HRun=10;HaplotypeScore=57.9416;InbreedingCoeff=0.7700;MQ=64.68;MQ0=3;MQRankSum=0.810;QD=13.77;ReadPosRankSum=0.282;VQSLOD=1.9855;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:22:53.97:469,54,0	0/0:11,0:11:30.08:0,30,332	0/0:13,0:12:18.74:0,19,174	0/0:6,0:6:15.04:0,15,164	0/0:19,0:19:42.03:0,42,430	0/0:24,0:23:69.15:0,69,743	1/1:2,11:13:32.98:286,33,0	0/0:22,0:22:42.03:0,42,438	0/0:19,1:18:33.05:0,33,352	0/0:14,1:14:30.08:0,30,332	0/0:18,1:19:22.07:0,22,472	0/0:21,0:21:54.14:0,54,595	0/0:19,0:20:50.96:0,51,538	0/0:18,1:19:22.07:0,22,467	0/0:26,0:27:56.93:0,57,596	0/0:20,1:21:25.08:0,25,501	0/0:26,0:26:66.18:0,66,730	0/0:14,0:14:39.11:0,39,431	0/0:16,0:16:45.09:0,45,485	0/0:29,0:28:67.06:0,67,732	0/1:9,2:11:22.07:22,0,222	0/0:29,0:28:54.15:0,54,597	0/0:25,0:26:59.19:0,59,677	0/0:19,0:19:51.10:0,51,551	0/0:29,0:29:81.22:0,81,896	0/0:31,0:32:87.07:0,87,941	0/0:28,0:28:81.22:0,81,893	0/0:9,0:9:27.05:0,27,289
chr10	81984929	.	T	TTTCCAC	16559.30	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.776;DP=566;FS=2.965;HRun=0;HaplotypeScore=121.4351;InbreedingCoeff=0.9942;MQ=90.44;MQ0=0;MQRankSum=-17.541;QD=98.57;ReadPosRankSum=0.455;VQSLOD=6.9461;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:33.11:1170,33,0	0/0:7,0:7:21.07:0,21,538	0/0:24,0:24:66.22:0,66,1642	0/0:26,0:26:71.70:0,72,1672	0/0:34,0:34:99:0,102,2507	1/1:1,24:26:69.24:2542,69,0	1/1:0,10:13:30.10:1098,30,0	0/0:30,0:30:87.26:0,87,2110	1/1:1,17:18:51.18:1878,51,0	0/0:19,0:19:57.20:0,57,1462	0/0:20,0:20:57.20:0,57,1427	1/1:0,11:11:33.11:1215,33,0	0/0:23,0:23:69.24:0,69,1705	0/0:24,0:24:69.22:0,69,1716	0/0:10,0:10:30.10:0,30,739	0/0:26,0:26:78.27:0,78,1999	0/0:25,0:25:72.25:0,72,1828	0/0:15,0:15:42.14:0,42,1076	1/1:1,10:11:33.11:1176,33,0	1/1:0,26:27:81.28:2769,81,0	0/0:26,0:26:78.27:0,78,1999	0/0:22,0:22:63.22:0,63,1604	1/1:0,18:19:54.05:1918,54,0	1/1:0,7:7:12.04:393,12,0	0/0:34,0:34:99:0,102,2486	0/0:25,0:25:75.25:0,75,1824	1/1:1,21:24:66.23:2401,66,0	0/0:8,0:8:24.08:0,24,615
chr10	81986643	.	TTGTG	T	4340.56	PASS	AB=0.938;AC=21;AF=0.389;AN=54;BaseQRankSum=9.388;DP=660;FS=2.700;HRun=0;HaplotypeScore=125.9958;InbreedingCoeff=0.8401;MQ=67.74;MQ0=5;MQRankSum=0.532;QD=15.28;ReadPosRankSum=1.351;VQSLOD=4.7057;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:37:9:0,9,117	0/0:14,0:14:15.05:0,15,328	./.	0/0:32,0:27:12.04:0,12,230	0/0:22,0:23:48.15:0,48,1010	1/1:13,20:33:54.18:835,54,0	1/1:16,8:24:5.70:278,6,0	1/1:19,0:26:11.43:99,11,0	1/1:6,13:20:36.11:550,36,0	0/0:22,0:24:32.58:0,33,630	0/0:15,0:19:44.36:0,44,864	1/1:7,9:16:21.07:332,21,0	0/0:15,0:16:29.81:0,30,606	0/0:23,0:24:0.57:0,1,828	0/0:23,1:29:2.61:0,3,805	0/0:23,0:25:53.65:0,54,1137	0/0:27,0:30:35.84:0,36,765	0/0:16,0:17:38.85:0,39,791	1/1:17,4:20:14.89:162,15,0	1/1:14,14:27:42.14:664,42,0	0/1:28,1:30:3.40:3,0,623	0/0:9,0:11:26.56:0,27,493	1/1:15,14:29:27.09:417,27,0	1/1:18,11:29:28.65:585,29,0	0/0:20,0:22:26.83:0,27,583	0/0:14,0:19:36.47:0,36,550	1/1:14,12:27:17.59:415,18,0	0/0:8,0:7:19.62:0,20,407
chr10	81986874	.	C	CTGT	18031.38	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-16.035;DP=743;FS=0.283;HRun=0;HaplotypeScore=99.6688;InbreedingCoeff=0.9746;MQ=85.13;MQ0=0;MQRankSum=-6.220;QD=56.17;ReadPosRankSum=-0.573;VQSLOD=6.3974;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,57:61:99:3500,156,0	0/0:9,0:9:24.08:0,24,404	0/0:31,0:31:78.95:0,79,1293	0/0:25,0:25:60.20:0,60,984	0/0:29,0:29:84.29:0,84,1428	1/1:2,28:32:63.22:1452,63,0	1/1:4,23:27:60.16:1332,60,0	1/1:10,31:43:99:2411,114,0	1/1:1,19:21:3.01:1124,3,0	0/0:27,0:27:81.28:0,81,1381	0/0:22,0:22:63.22:0,63,1066	1/1:2,19:21:57.20:1314,57,0	0/0:27,0:27:72.25:0,72,1221	0/0:27,0:27:78.27:0,78,1330	0/0:25,0:25:63.21:0,63,1062	0/0:22,0:22:63.20:0,63,1048	0/0:30,0:30:87.30:0,87,1475	0/0:24,0:24:69.19:0,69,1139	1/1:5,17:24:69.24:1540,69,0	1/1:2,23:25:69.19:1541,69,0	0/0:42,0:42:99:0,117,1935	0/0:24,0:24:63.22:0,63,1075	1/1:2,17:19:48.08:1008,48,0	1/1:1,20:21:51.16:1176,51,0	0/0:15,0:15:45.10:0,45,681	0/0:31,0:31:93.31:0,93,1560	1/1:3,24:27:72.25:1634,72,0	0/0:12,0:12:33.11:0,33,550
chr10	81987524	.	CGT	C	480.35	PASS	AB=0.919;AC=14;AF=0.269;AN=52;BaseQRankSum=3.337;DP=683;FS=13.823;HRun=0;HaplotypeScore=102.6412;InbreedingCoeff=0.1100;MQ=56.40;MQ0=17;MQRankSum=1.257;QD=1.94;ReadPosRankSum=2.061;VQSLOD=0.9306;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:27:8.19:42,8,0	0/0:5,2:7:3.01:0,3,45	./.	./.	0/0:23,0:21:9:0,9,93	0/0:10,0:24:11.57:0,12,104	1/1:20,0:30:5.95:29,6,0	0/0:35,0:34:27.83:0,28,285	0/0:10,0:23:12.48:0,12,123	0/0:19,0:19:6.02:0,6,88	0/1:10,2:13:50.61:51,0,117	0/0:18,0:36:14.77:0,15,149	1/1:13,10:24:32.92:341,33,0	0/1:19,1:20:50.52:51,0,120	0/1:23,1:24:14.78:15,0,204	0/0:20,0:20:29.84:0,30,406	0/0:19,0:27:23.82:0,24,207	0/1:15,1:16:13.93:14,0,176	0/1:15,1:14:23.89:24,0,37	0/0:16,0:22:24.02:0,24,263	0/0:39,0:38:30.09:0,30,424	0/1:26,2:27:32.56:33,0,360	0/0:17,0:22:18.02:0,18,190	0/0:18,0:38:26.98:0,27,230	0/1:17,2:19:2.74:3,0,345	0/1:25,2:28:33.48:33,0,324	0/0:16,1:31:3.21:0,3,328	0/0:12,0:12:3.01:0,3,45
chr10	81988729	.	AT	A	4642.03	PASS	AB=0.857;AC=21;AF=0.375;AN=56;BaseQRankSum=14.115;DP=506;FS=0.739;HRun=8;HaplotypeScore=58.4510;InbreedingCoeff=0.8939;MQ=72.82;MQ0=0;MQRankSum=-0.226;QD=22.53;ReadPosRankSum=2.049;VQSLOD=5.4484;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:30:69.06:656,69,0	0/0:6,0:6:18.06:0,18,217	0/0:10,0:10:22.30:0,22,246	0/0:10,0:9:13.06:0,13,159	0/0:32,0:32:80.80:0,81,915	1/1:0,17:17:51.08:492,51,0	1/1:3,11:14:30.04:290,30,0	0/0:26,0:26:69.19:0,69,804	1/1:2,11:13:27.04:261,27,0	0/0:29,0:29:78.23:0,78,922	0/0:23,0:23:69.21:0,69,833	1/1:2,17:19:51.08:492,51,0	0/0:26,0:26:72.21:0,72,858	0/0:14,0:14:39.11:0,39,461	0/0:14,0:14:39.10:0,39,452	0/1:10,2:12:24.87:25,0,270	0/0:16,0:16:48.15:0,48,579	0/0:17,0:17:42.09:0,42,491	1/1:3,18:21:54.05:511,54,0	1/1:0,18:18:54.01:508,54,0	0/0:14,0:14:39.09:0,39,448	0/0:14,0:14:39.12:0,39,471	1/1:3,17:20:47.81:452,48,0	1/1:0,12:12:30.05:290,30,0	0/0:26,0:26:69.21:0,69,833	0/0:22,0:22:66.18:0,66,778	1/1:6,24:30:69.10:666,69,0	0/0:1,0:1:3.01:0,3,36
chr10	81989480	.	ATTTG	A	1823.10	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=10.368;DP=410;FS=0.504;HRun=0;HaplotypeScore=84.7044;InbreedingCoeff=0.1789;MQ=67.24;MQ0=1;MQRankSum=-3.056;QD=10.54;ReadPosRankSum=0.752;VQSLOD=2.3160;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,12:24:41.65:676,42,0	0/0:2,0:2:6:0,6,99	0/1:17,0:13:10.83:11,0,128	0/0:7,0:7:14.61:0,15,153	0/0:28,0:28:75.12:0,75,1568	0/1:17,0:17:41.90:245,0,42	1/1:3,5:8:6.02:102,6,0	0/1:21,0:21:42.91:43,0,297	0/1:11,0:11:49.71:96,0,50	0/0:20,0:20:45.13:0,45,1025	0/0:10,0:10:23.85:0,24,446	0/1:11,0:11:20.59:159,0,21	0/0:9,0:9:21.04:0,21,369	0/0:11,0:11:33.08:0,33,722	0/0:15,0:15:45.06:0,45,817	0/0:15,0:15:36.08:0,36,748	0/0:29,0:29:74.91:0,75,1320	0/0:20,0:20:38.57:0,39,956	0/1:14,0:14:57.61:68,0,58	0/1:22,0:22:0.31:279,0,0	0/0:11,0:11:30.07:0,30,620	0/0:8,0:8:17.99:0,18,246	1/1:5,0:5:5.60:36,6,0	0/1:6,0:6:27.99:67,0,28	0/0:18,0:18:45.68:0,46,796	0/0:21,0:21:19.84:0,20,874	0/1:17,0:17:38.05:207,0,38	0/0:13,0:13:38.96:0,39,624
chr10	81989496	.	GTTTC	G	3118.08	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=10.659;DP=393;FS=10.454;HRun=0;HaplotypeScore=79.6721;InbreedingCoeff=0.7101;MQ=60.97;MQ0=2;MQRankSum=-3.267;QD=20.65;ReadPosRankSum=-0.715;VQSLOD=2.0213;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:46.59:296,0,47	0/0:3,0:3:6.01:0,6,99	1/1:12,0:7:5.35:29,5,0	0/1:11,0:10:12.53:13,0,102	0/0:27,0:27:69.21:0,69,1547	1/1:8,9:17:39:540,39,0	0/1:7,0:7:24.98:38,0,25	0/0:18,0:18:42.11:0,42,702	1/1:6,2:8:18.05:271,18,0	0/0:17,0:17:44.88:0,45,1004	0/0:13,0:13:30.05:0,30,543	1/1:7,4:11:27.06:377,27,0	0/0:7,0:7:15.02:0,15,272	0/0:12,0:12:30.09:0,30,693	0/0:15,0:15:30.08:0,30,645	0/0:14,0:14:33.09:0,33,718	0/0:29,0:29:57.08:0,57,1200	0/0:19,0:19:41.52:0,42,898	1/1:11,3:13:23.82:272,24,0	1/1:11,9:20:53.71:700,54,0	0/0:12,0:12:27.05:0,27,542	0/0:6,0:6:6.02:0,6,147	1/1:3,1:4:8.94:101,9,0	1/1:6,2:8:12.04:197,12,0	0/0:17,0:17:33.08:0,33,652	0/0:19,0:19:42.12:0,42,899	1/1:7,8:15:36.02:491,36,0	0/0:14,0:14:27.02:0,27,467
chr10	81989541	.	AT	A	2635.02	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=12.037;DP=358;FS=0.918;HRun=8;HaplotypeScore=48.6375;InbreedingCoeff=0.9345;MQ=70.09;MQ0=0;MQRankSum=-1.566;QD=22.91;ReadPosRankSum=1.021;VQSLOD=4.0480;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:21:48.07:463,48,0	0/0:3,0:3:9.03:0,9,109	0/0:9,0:8:14.71:0,15,155	0/0:11,0:10:5.45:0,5,120	0/0:25,0:25:75.23:0,75,905	1/1:1,19:20:54.09:521,54,0	1/1:0,7:7:18.03:174,18,0	0/0:26,0:26:72.21:0,72,851	1/1:0,6:6:18.03:174,18,0	0/0:19,0:19:51.15:0,51,605	0/0:16,0:16:48.15:0,48,580	1/1:1,7:8:17.98:174,18,0	0/0:5,0:5:15.05:0,15,181	0/0:14,0:14:39.12:0,39,471	0/0:11,0:11:30.09:0,30,362	0/0:16,0:16:42.13:0,42,507	0/0:24,0:24:66.20:0,66,797	0/0:13,0:13:33.10:0,33,398	1/1:1,18:19:51.07:486,51,0	1/1:1,12:13:33.04:319,33,0	0/0:4,0:4:12.04:0,12,145	0/0:3,0:3:9.03:0,9,109	1/1:0,2:2:6.01:58,6,0	1/1:0,6:6:14.96:134,15,0	0/0:12,0:12:36.10:0,36,426	0/0:21,0:21:54.16:0,54,643	1/1:1,12:13:36.06:348,36,0	0/0:11,0:11:33.10:0,33,399
chr10	81992109	.	GC	G	8351.44	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.742;DP=745;FS=15.310;HRun=4;HaplotypeScore=71.6596;InbreedingCoeff=0.9997;MQ=88.34;MQ0=0;MQRankSum=-7.508;QD=30.82;ReadPosRankSum=3.354;VQSLOD=3.7710;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,56:57:99:1764,147,0	0/0:8,0:8:24.08:0,24,329	0/0:26,0:26:75.21:0,75,978	0/0:26,0:27:61.37:0,61,776	0/0:31,0:31:90.29:0,90,1243	1/1:3,28:31:66.20:792,66,0	1/1:1,21:22:54.16:648,54,0	0/0:37,0:37:99:0,102,1393	1/1:1,32:33:84.26:1008,84,0	0/0:39,0:39:99:0,114,1557	0/0:29,0:29:84.26:0,84,1158	1/1:2,27:29:81.25:972,81,0	0/0:28,0:28:84.28:0,84,1176	0/0:25,0:25:72.22:0,72,990	0/0:30,0:30:90.30:0,90,1260	0/0:30,0:30:84.28:0,84,1175	0/0:23,0:23:69.22:0,69,950	0/0:23,0:23:63.15:0,63,843	1/1:1,12:13:33.10:396,33,0	1/1:1,21:22:54.16:648,54,0	0/0:25,0:25:72.24:0,72,1008	0/0:33,0:33:96.29:0,96,1308	1/1:0,18:18:54.17:648,54,0	1/1:1,21:22:54.17:648,54,0	0/0:17,0:17:51.17:0,51,714	0/0:24,0:24:72.24:0,72,1008	1/1:0,24:24:69.21:828,69,0	0/0:19,0:19:57.19:0,57,797
chr10	81992810	.	CTG	C	4261.75	PASS	AB=0.920;AC=34;AF=0.607;AN=56;BaseQRankSum=-5.790;DP=742;FS=5.829;HRun=0;HaplotypeScore=145.6545;InbreedingCoeff=0.2837;MQ=66.18;MQ0=21;MQRankSum=4.643;QD=7.45;ReadPosRankSum=2.958;VQSLOD=4.3205;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:18.47:0,18,185	1/1:5,8:13:15.04:171,15,0	0/0:28,0:16:3.90:0,4,39	0/1:39,0:27:4.05:4,0,24	1/1:6,22:28:47.80:527,48,0	0/1:18,0:17:18:18,0,19	0/1:21,0:20:10.90:11,0,20	0/1:40,0:39:4.72:5,0,78	1/1:23,0:23:5.47:63,5,0	1/1:20,25:43:44.06:708,44,0	1/1:5,4:10:6.02:68,6,0	0/1:30,0:28:25.18:37,0,25	0/0:28,0:26:14.71:0,15,131	0/1:23,1:23:16.17:16,0,162	1/1:6,12:18:24.07:270,24,0	1/1:7,16:26:29.75:301,30,0	1/1:9,12:21:8.41:224,8,0	1/1:8,13:20:18.05:205,18,0	0/0:25,0:24:21.26:0,21,188	0/1:20,0:20:7.73:8,0,20	0/1:23,30:48:7.26:351,0,7	0/0:33,0:33:3.81:0,4,130	1/1:16,0:15:10.93:62,11,0	0/1:23,0:23:0:0,0,0	1/1:8,14:22:30.09:342,30,0	1/1:13,24:37:74.88:783,75,0	0/0:24,0:23:34.73:0,35,241	0/1:5,9:13:67.31:88,0,67
chr10	81992840	.	GTC	G	2132.32	PASS	AB=0.981;AC=34;AF=0.607;AN=56;BaseQRankSum=9.313;DP=709;FS=35.418;HRun=0;HaplotypeScore=145.8022;InbreedingCoeff=-0.2900;MQ=49.57;MQ0=38;MQRankSum=-1.037;QD=3.41;ReadPosRankSum=6.710;VQSLOD=0.9920;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:29:14.31:14,0,85	0/1:12,0:11:51.39:61,0,51	1/1:7,0:1:2.90:16,3,0	0/1:9,0:3:0.36:8,0,0	0/1:31,0:31:66.48:108,0,66	1/1:11,3:13:7.13:70,7,0	1/1:16,1:13:11.68:96,12,0	1/1:24,1:23:45.13:240,45,0	1/1:21,6:24:31.73:268,32,0	0/1:51,0:46:87.79:88,0,351	0/1:10,0:8:14.78:16,0,15	1/1:14,9:21:13.57:155,14,0	0/0:30,0:29:2.01:0,2,73	0/0:20,0:19:1.52:0,2,140	0/1:25,1:24:61.70:62,0,169	0/1:27,0:27:30.36:30,0,118	0/1:23,0:24:52.40:52,0,169	0/1:27,0:25:19.52:20,0,150	0/1:24,0:20:44.80:45,0,88	1/1:18,0:18:34.70:263,35,0	0/1:59,0:48:49.91:50,0,184	0/0:34,0:33:3.14:0,3,134	1/1:21,4:24:21.01:228,21,0	0/1:17,4:21:1.75:19,0,2	0/1:30,0:29:39.68:40,0,219	0/1:45,0:42:99:138,0,187	1/1:23,2:23:5.28:174,5,0	0/1:13,1:13:29.15:29,0,44
chr10	81992842	.	CTG	C	426.52	PASS	AB=0.967;AC=14;AF=0.269;AN=52;BaseQRankSum=4.470;DP=708;FS=6.979;HRun=0;HaplotypeScore=153.9143;InbreedingCoeff=0.3847;MQ=48.64;MQ0=38;MQRankSum=-6.852;QD=2.06;ReadPosRankSum=-1.842;VQSLOD=1.8789;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,5:28:64:64,0,65	0/0:12,0:11:7.56:0,8,177	./.	./.	0/0:32,0:32:59.01:0,59,454	1/1:15,0:14:4.06:27,4,0	1/1:18,0:14:5.11:24,5,0	1/1:25,0:23:0.43:229,0,0	1/1:27,0:24:5.67:75,6,0	0/0:50,0:45:99:0,113,1200	0/0:9,0:7:11.05:0,11,88	0/1:24,0:22:25.44:36,0,25	0/0:31,0:30:11.91:0,12,121	0/0:19,0:18:14.77:0,15,174	0/0:27,0:25:34.33:0,34,534	0/0:27,0:27:47.25:0,47,449	0/0:25,0:25:44.30:0,44,532	0/0:26,0:24:37.38:0,37,451	0/1:22,0:19:53.09:53,0,122	0/1:18,0:18:6.34:6,0,21	0/0:59,0:48:58.92:0,59,578	0/0:34,0:33:11.72:0,12,119	1/1:25,0:24:10.93:62,11,0	0/0:20,1:21:2.22:0,2,7	0/0:30,0:29:63.79:0,64,707	0/0:45,0:42:99:0,100,892	0/0:27,0:25:28.12:0,28,197	0/0:13,0:12:0.23:0,0,94
chr10	81992846	.	G	GTC	58.02	PASS	AB=0.972;AC=6;AF=0.115;AN=52;BaseQRankSum=5.795;DP=698;FS=0.000;HRun=0;HaplotypeScore=170.3055;InbreedingCoeff=0.1450;MQ=48.46;MQ0=36;MQRankSum=-2.110;QD=0.50;ReadPosRankSum=0.167;VQSLOD=2.6634;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,4:27:66.19:76,0,66	0/0:12,0:11:27.07:0,27,381	./.	./.	0/0:31,0:31:66.21:0,66,961	0/0:17,0:16:1.79:0,2,17	1/1:16,0:12:5.14:24,5,0	0/0:25,0:22:49.38:0,49,289	0/0:26,0:23:3.55:0,4,150	0/0:51,0:46:99:0,125,1750	0/0:11,0:9:14.16:0,14,137	0/0:25,0:23:9.61:0,10,88	0/0:31,0:30:14.45:0,14,144	0/0:20,0:19:15.02:0,15,193	0/0:26,0:24:54.16:0,54,790	0/0:27,0:27:48.16:0,48,732	0/0:24,0:25:50.95:0,51,811	0/0:26,0:24:45:0,45,658	0/1:21,0:17:18.82:19,0,252	0/1:19,0:18:23.90:24,0,61	0/0:61,0:49:66.19:0,66,962	0/0:33,0:33:12.27:0,12,115	0/0:24,0:23:14.96:0,15,139	0/0:22,0:22:0.89:0,1,2	0/0:30,0:29:64.77:0,65,965	0/0:42,0:39:99:0,107,1454	0/1:27,0:25:32.62:33,0,136	0/0:13,0:12:17.99:0,18,225
chr10	81992848	.	GTC	G	1572.98	PASS	AB=1.000;AC=19;AF=0.365;AN=52;BaseQRankSum=7.975;DP=693;FS=23.297;HRun=0;HaplotypeScore=162.0777;InbreedingCoeff=0.5700;MQ=48.34;MQ0=38;MQRankSum=-6.119;QD=6.53;ReadPosRankSum=-1.495;VQSLOD=1.7034;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:28:30.79:31,0,51	0/0:12,0:11:2.19:0,2,316	./.	./.	0/0:31,0:31:66.08:0,66,889	1/1:17,0:16:7.01:68,7,0	1/1:16,0:12:3.41:13,3,0	1/1:7,18:22:47.99:588,48,0	1/1:24,1:22:31.64:265,32,0	0/0:51,0:45:99:0,126,1957	0/0:12,0:10:21:0,21,233	1/1:25,0:23:13.57:158,14,0	0/0:32,0:31:0.05:0,0,174	0/0:21,0:19:18.04:0,18,254	0/0:26,0:24:52.99:0,53,847	0/0:25,0:25:48.16:0,48,755	0/0:24,0:24:54.70:0,55,801	0/0:26,0:24:22.93:0,23,697	0/1:20,0:16:44.92:45,0,88	1/1:18,0:17:31.72:232,32,0	0/0:59,1:49:69.16:0,69,1019	0/0:34,0:33:2.41:0,2,95	1/1:22,1:22:15.02:174,15,0	0/0:20,2:22:2.22:0,2,7	0/0:30,0:29:69.15:0,69,1097	0/0:43,0:40:89.52:0,90,1406	1/1:24,2:24:7.29:159,7,0	0/1:13,0:12:21.74:22,0,130
chr10	81992850	.	CTG	C	509.06	PASS	AB=0.943;AC=15;AF=0.288;AN=52;BaseQRankSum=7.211;DP=687;FS=8.303;HRun=0;HaplotypeScore=164.3098;InbreedingCoeff=0.3717;MQ=48.58;MQ0=37;MQRankSum=-6.737;QD=2.17;ReadPosRankSum=-0.055;VQSLOD=2.0073;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,8:28:32.57:33,0,65	0/0:12,0:11:19.38:0,19,406	./.	./.	0/0:33,0:33:69.22:0,69,1130	0/1:16,1:16:4.83:19,0,5	0/1:15,1:12:9.44:13,0,9	1/1:22,0:19:35.88:281,36,0	1/1:23,2:22:11.08:120,11,0	0/0:51,0:45:99:0,123,2004	0/0:12,0:10:18.06:0,18,302	0/1:26,1:25:11.99:50,0,12	0/0:32,0:31:15.05:0,15,229	0/0:21,0:19:18.06:0,18,300	0/0:27,0:25:57.05:0,57,945	0/0:25,0:25:48.16:0,48,845	0/0:24,0:24:55.95:0,56,907	0/0:25,0:24:43.20:0,43,803	0/1:17,1:14:14.30:14,0,113	1/1:18,0:17:16.18:68,16,0	0/0:63,0:52:81.21:0,81,1310	0/0:32,0:31:6.91:0,7,100	1/1:22,1:22:10.92:59,11,0	0/0:21,0:21:2.22:0,2,7	0/0:30,0:29:66.23:0,66,1146	0/0:42,0:39:99:0,99,1520	0/1:27,0:25:18.03:18,0,82	0/1:9,0:8:1.62:2,0,180
chr10	81992852	.	G	GTC	576.68	PASS	AB=0.931;AC=7;AF=0.135;AN=52;BaseQRankSum=6.216;DP=682;FS=0.772;HRun=0;HaplotypeScore=166.3877;InbreedingCoeff=0.1917;MQ=48.54;MQ0=36;MQRankSum=-3.653;QD=3.98;ReadPosRankSum=-0.276;VQSLOD=2.7490;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:29:50.16:50,0,74	0/0:12,0:11:27.09:0,27,409	./.	./.	0/0:32,0:32:69.22:0,69,1027	0/1:14,2:15:5.67:6,0,7	0/0:17,0:13:1.23:0,1,14	0/0:20,0:18:22.28:0,22,308	0/1:23,1:21:31.08:31,0,77	0/0:50,0:44:99:0,123,1797	0/0:12,0:10:18.06:0,18,273	0/1:26,1:25:46.05:46,0,61	0/0:30,0:29:15.05:0,15,225	0/0:21,0:19:18.06:0,18,267	0/0:27,0:25:57.06:0,57,841	0/0:25,0:25:48.16:0,48,734	0/0:25,0:25:50.35:0,50,825	0/0:27,0:26:50.76:0,51,744	0/0:14,0:11:18.72:0,19,177	1/1:14,3:16:17.42:314,17,0	0/0:69,0:58:84.22:0,84,1197	0/0:31,0:30:7.27:0,7,95	0/0:22,2:23:14.92:0,15,121	0/0:20,1:21:0.89:0,1,2	0/0:30,0:29:66.22:0,66,1007	0/0:40,0:37:99:0,103,1467	0/1:22,5:25:59.86:258,0,60	0/0:9,0:8:15.04:0,15,212
chr10	81992858	.	CTG	C	635.95	PASS	AB=0.810;AC=14;AF=0.259;AN=54;BaseQRankSum=8.934;DP=667;FS=9.508;HRun=0;HaplotypeScore=150.4053;InbreedingCoeff=0.3124;MQ=47.96;MQ0=41;MQRankSum=-5.955;QD=2.94;ReadPosRankSum=-0.354;VQSLOD=1.9855;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,5:29:19.81:20,0,67	0/0:11,0:10:24.08:0,24,426	0/0:3,0:3:3.01:0,3,52	./.	0/0:31,0:31:60.19:0,60,986	0/1:7,9:15:8.75:25,0,9	1/1:11,7:14:5.68:31,6,0	0/1:19,0:17:20.85:21,0,58	1/1:13,11:21:10.29:123,10,0	0/0:47,0:39:93.32:0,93,1608	0/0:12,0:10:21.07:0,21,367	0/1:16,9:23:6.67:73,0,7	0/0:29,0:29:18.06:0,18,278	0/0:19,0:17:15.04:0,15,222	0/0:28,0:26:63.18:0,63,1043	0/0:22,0:22:54.17:0,54,909	0/0:25,0:25:61.98:0,62,1032	0/0:26,0:25:42.58:0,43,856	0/1:16,2:12:68.91:119,0,69	1/1:10,3:12:14.78:107,15,0	0/0:74,0:62:99:0,114,1792	0/0:29,0:28:9.92:0,10,139	1/1:16,8:23:1.14:3,1,0	0/0:14,6:20:2.22:0,2,7	0/0:27,0:26:60.21:0,60,1057	0/0:37,0:34:87.24:0,87,1349	0/1:15,10:23:24.70:271,0,25	0/0:8,0:7:14.54:0,15,219
chr10	81992864	.	GTC	G	288.60	PASS	AB=0.969;AC=10;AF=0.179;AN=56;BaseQRankSum=7.673;DP=657;FS=14.663;HRun=0;HaplotypeScore=144.2349;InbreedingCoeff=0.0101;MQ=47.63;MQ0=36;MQRankSum=-7.142;QD=1.47;ReadPosRankSum=-1.142;VQSLOD=1.8425;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:27:4.78:5,0,52	0/0:11,0:10:16.34:0,16,451	0/0:7,0:4:6.01:0,6,82	0/0:6,0:1:2.60:0,3,10	0/0:25,0:25:59.98:0,60,1007	0/1:15,2:16:17.63:36,0,18	1/1:19,0:16:3.66:15,4,0	0/1:19,0:16:53.19:53,0,123	0/1:23,1:21:18.71:101,0,19	0/0:41,0:36:99:0,105,1738	0/0:13,0:11:23.87:0,24,417	0/1:24,3:25:23.26:50,0,23	0/0:29,0:29:21.05:0,21,343	0/0:17,0:15:17.08:0,17,216	0/0:29,0:27:60.19:0,60,1110	0/0:21,0:21:54.17:0,54,981	0/0:27,1:28:68.78:0,69,1156	0/0:24,0:23:23.98:0,24,941	0/1:17,0:11:49.37:49,0,60	0/0:12,0:11:8.07:0,8,29	0/0:75,1:64:99:0,126,2191	0/0:29,0:28:2.28:0,2,200	0/1:16,0:15:0.21:0,0,0	0/0:21,3:24:4.96:0,5,19	0/0:28,0:28:50.24:0,50,1223	0/0:33,0:31:86.33:0,86,1353	0/1:26,0:25:99:110,0,102	0/0:8,0:7:12.03:0,12,187
chr10	81992913	.	T	TGTGTGG	4503.62	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.491;DP=840;FS=0.400;HRun=0;HaplotypeScore=233.9438;InbreedingCoeff=0.9436;MQ=54.50;MQ0=8;MQRankSum=-15.235;QD=16.20;ReadPosRankSum=-11.705;VQSLOD=0.8773;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,24:38:36.02:265,36,0	0/0:11,0:11:27.06:0,27,515	0/0:49,0:37:83.33:0,83,1573	0/0:45,0:28:56.97:0,57,1001	0/0:26,0:26:75.20:0,75,1534	1/1:7,10:17:28.64:241,29,0	1/1:18,15:33:38.36:353,38,0	0/0:32,0:32:63.16:0,63,1273	1/1:7,14:19:20.48:202,20,0	0/0:43,0:42:99:0,108,2083	0/0:26,0:26:75.19:0,75,1490	1/1:5,28:33:53.91:842,54,0	0/0:27,0:27:54.17:0,54,1178	0/0:24,0:24:60.19:0,60,1295	0/0:26,0:26:72.17:0,72,1452	0/0:21,0:21:57.18:0,57,1222	0/0:31,0:31:87.30:0,87,1904	0/0:25,0:25:72.23:0,72,1551	1/1:7,15:24:68.39:1689,68,0	1/1:6,22:27:20.08:102,20,0	0/0:82,0:82:99:0,215,4676	0/0:27,0:27:60.18:0,60,1229	1/1:3,13:19:2.96:21,3,0	1/1:3,32:36:14.72:91,15,0	0/0:30,0:30:73.61:0,74,1581	0/0:35,0:35:93.32:0,93,2058	1/1:10,16:26:27.67:697,28,0	0/0:1,0:1:3.01:0,3,68
chr10	81994085	.	GA	G	5162.96	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.048;DP=667;FS=18.148;HRun=8;HaplotypeScore=69.4366;InbreedingCoeff=0.9803;MQ=78.56;MQ0=0;MQRankSum=0.719;QD=24.24;ReadPosRankSum=2.013;VQSLOD=3.6692;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.25:0,84,1003	0/0:13,0:13:36.11:0,36,435	0/0:23,0:23:36.34:0,36,508	0/0:13,0:13:26.57:0,27,286	0/0:36,0:36:96.28:0,96,1148	1/1:3,29:32:81.13:782,81,0	0/0:18,0:18:42.12:0,42,496	0/0:23,0:22:66.19:0,66,787	1/1:0,24:24:72.12:695,72,0	0/0:27,0:27:75.23:0,75,906	0/0:28,0:28:72.20:0,72,848	1/1:4,26:30:72.11:695,72,0	0/0:26,0:26:72.12:0,72,838	0/0:21,0:21:54.16:0,54,649	0/0:28,0:28:75.23:0,75,906	0/0:16,1:17:16.15:0,16,467	0/0:26,0:26:66.19:0,66,786	0/0:19,0:19:45.14:0,45,543	1/1:3,21:24:63.04:586,63,0	1/1:3,24:27:66.09:637,66,0	0/0:20,0:20:60.18:0,60,725	0/0:31,0:32:87.08:0,87,1002	1/1:3,14:17:42.06:406,42,0	1/1:0,14:14:39.06:377,39,0	0/0:21,0:21:57.17:0,57,689	0/0:28,0:29:78.11:0,78,921	1/1:9,36:45:99:985,102,0	0/0:2,0:2:6.02:0,6,72
chr10	81994521	.	C	CAA	459.72	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.288;DP=357;FS=12.968;HRun=4;HaplotypeScore=46.0139;InbreedingCoeff=0.8355;MQ=68.35;MQ0=0;MQRankSum=-4.535;QD=25.54;ReadPosRankSum=0.145;VQSLOD=0.9371;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,10:12:30.02:451,30,0	0/0:4,0:4:12.04:0,12,160	0/0:9,0:9:21.07:0,21,280	0/0:6,0:6:11.19:0,11,174	0/0:20,0:20:54.16:0,54,703	0/0:25,0:25:69.21:0,69,902	1/1:1,5:6:8.99:122,9,0	0/0:38,0:38:86.45:0,86,1063	0/0:5,0:5:15.02:0,15,169	0/0:20,0:20:60.18:0,60,785	0/0:14,0:14:39.10:0,39,502	0/0:16,0:16:48.16:0,48,639	0/0:7,0:7:18.06:0,18,240	0/0:10,0:10:21.05:0,21,265	0/0:11,0:11:33.09:0,33,423	0/0:8,0:8:24.05:0,24,302	0/0:15,0:15:39.12:0,39,519	0/0:14,0:14:41.93:0,42,511	0/0:14,0:14:39.08:0,39,473	0/0:19,0:19:51.15:0,51,664	0/0:2,0:2:6.02:0,6,80	0/0:4,0:4:12.04:0,12,159	0/0:6,0:6:18.04:0,18,224	0/0:6,0:6:15.05:0,15,200	0/0:10,0:10:30.09:0,30,385	0/0:24,0:23:72.23:0,72,948	0/0:26,0:26:54.15:0,54,698	0/0:6,0:6:12.04:0,12,160
chr10	81995143	.	ATTC	A	1241.40	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.428;DP=744;FS=8.411;HRun=0;HaplotypeScore=100.5291;InbreedingCoeff=0.9987;MQ=91.07;MQ0=0;MQRankSum=-4.030;QD=37.62;ReadPosRankSum=-4.066;VQSLOD=3.1401;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,2385	0/0:18,0:18:51.16:0,51,1083	0/0:33,0:33:89.47:0,89,1811	0/0:27,0:27:63.03:0,63,1170	0/0:29,0:29:81.28:0,81,1770	0/0:32,0:32:90.31:0,90,1987	0/0:22,0:22:66.21:0,66,1415	1/1:1,32:33:93.17:1336,93,0	0/0:24,0:24:69.24:0,69,1523	0/0:33,0:33:87.24:0,87,1724	0/0:20,0:20:60.21:0,60,1325	0/0:18,0:18:51.18:0,51,1125	0/0:33,0:33:96.31:0,96,2056	0/0:23,0:23:66.20:0,66,1346	0/0:43,0:43:99:0,123,2652	0/0:32,0:32:87.28:0,87,1878	0/0:19,0:19:51.16:0,51,1083	0/0:10,0:10:30.08:0,30,617	0/0:13,0:13:30.10:0,30,663	0/0:33,0:33:90.28:0,90,1904	0/0:27,0:27:66.23:0,66,1440	0/0:25,0:25:66.23:0,66,1440	0/0:21,0:21:60.21:0,60,1291	0/0:27,0:27:75.26:0,75,1633	0/0:34,0:34:96.32:0,96,2060	0/0:31,0:31:90.30:0,90,1949	0/0:33,0:33:99:0,99,2163	0/0:11,0:11:33.11:0,33,729
chr10	81996921	.	A	AT	4559.24	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-7.384;DP=582;FS=13.036;HRun=8;HaplotypeScore=59.7805;InbreedingCoeff=0.9981;MQ=75.39;MQ0=1;MQRankSum=-0.471;QD=24.38;ReadPosRankSum=2.151;VQSLOD=4.7829;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:69.02:0,69,630	0/0:7,0:7:18.01:0,18,165	0/0:14,0:13:29.70:0,30,238	0/0:20,0:19:46.21:0,46,382	0/0:19,0:19:50.90:0,51,444	1/1:5,21:27:63.18:719,63,0	0/0:19,0:20:53.05:0,53,467	0/0:34,0:34:80.86:0,81,720	1/1:2,10:12:27.08:312,27,0	0/0:20,0:20:51.02:0,51,466	0/0:12,0:12:30.01:0,30,274	1/1:1,23:25:41.58:714,42,0	0/0:29,0:29:80.83:0,81,723	0/0:22,0:22:54.02:0,54,494	0/0:24,0:24:69.04:0,69,631	0/0:27,0:27:72.03:0,72,656	0/0:22,0:21:63.03:0,63,576	1/1:0,19:19:51.15:589,51,0	1/1:3,15:18:46.38:522,46,0	1/1:3,17:20:48.11:538,48,0	0/0:21,0:20:48:0,48,439	0/0:13,0:13:35.99:0,36,324	1/1:2,0:14:31.25:159,31,0	1/1:3,0:24:48.29:245,48,0	0/0:20,0:20:57.03:0,57,521	0/0:30,0:30:72:0,72,654	1/1:2,26:28:66.20:761,66,0	0/0:10,0:10:26.93:0,27,237
chr10	81998583	.	AT	A	1704.68	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.410;DP=630;FS=1.585;HRun=8;HaplotypeScore=69.5383;InbreedingCoeff=0.9965;MQ=75.52;MQ0=0;MQRankSum=-0.936;QD=23.04;ReadPosRankSum=1.973;VQSLOD=4.4504;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.24:0,84,993	0/0:12,0:12:33.10:0,33,399	0/0:18,0:18:50.78:0,51,550	0/0:13,0:13:26.44:0,26,297	0/0:35,0:35:99:0,102,1169	0/0:19,0:19:54.17:0,54,652	0/0:15,0:15:42.13:0,42,507	0/0:39,0:39:93.27:0,93,1104	0/0:12,0:12:36.11:0,36,434	0/0:42,0:42:99:0,114,1377	0/0:21,0:21:57.16:0,57,668	0/0:25,0:25:69.21:0,69,833	0/0:30,0:30:81.25:0,81,978	0/0:25,0:25:63.17:0,63,738	0/0:31,1:32:64.31:0,64,1055	0/0:20,0:20:54.16:0,54,645	0/0:27,0:27:78.24:0,78,942	0/0:19,0:19:57.17:0,57,689	1/1:3,17:20:51.07:492,51,0	1/1:2,30:32:84.12:805,84,0	0/0:19,0:19:57.16:0,57,676	0/0:22,0:22:63.19:0,63,757	0/0:26,0:26:72.19:0,72,828	0/0:15,0:15:45.10:0,45,509	0/0:20,0:20:60.18:0,60,716	0/0:14,0:14:36.11:0,36,435	1/1:1,21:22:57.09:550,57,0	0/0:6,0:5:18.06:0,18,217
chr10	81999054	.	GT	G	2423.14	PASS	AB=0.755;AC=44;AF=0.846;AN=52;BaseQRankSum=0.959;DP=376;FS=3.592;HRun=1;HaplotypeScore=78.1558;InbreedingCoeff=0.2337;MQ=51.31;MQ0=21;MQRankSum=2.326;QD=6.98;ReadPosRankSum=3.455;VQSLOD=1.0812;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:13:12.66:13,0,16	1/1:5,0:5:6.35:37,6,0	0/0:2,0:2:2.97:0,3,20	0/0:2,0:1:2.97:0,3,20	1/1:0,22:22:3:28,3,0	1/1:11,2:11:1.82:5,2,0	1/1:19,0:17:6.10:119,6,0	1/1:12,0:12:29.69:237,30,0	1/1:0,14:10:4.76:81,5,0	1/1:16,0:15:38.15:221,38,0	0/1:1,24:24:9.95:113,0,10	1/1:1,10:11:8.99:77,9,0	1/1:0,15:15:24.02:241,24,0	1/1:1,6:9:11.08:135,11,0	0/0:0,14:14:0:0,0,0	1/1:1,15:16:2.83:37,3,0	1/1:14,0:13:16.51:98,17,0	./.	1/1:0,12:11:26.76:206,27,0	1/1:13,0:16:4.56:40,5,0	1/1:0,9:9:3:28,3,0	1/1:0,6:6:3.01:32,3,0	1/1:0,11:12:12:111,12,0	1/1:1,8:5:6:52,6,0	1/1:2,25:27:4.81:45,5,0	1/1:15,0:15:36.08:242,36,0	1/1:2,24:25:36:341,36,0	./.
chr10	82001090	.	CTTTT	C	4594.93	PASS	AB=0.946;AC=25;AF=0.463;AN=54;BaseQRankSum=3.097;DP=550;FS=0.399;HRun=5;HaplotypeScore=112.7901;InbreedingCoeff=0.3848;MQ=61.86;MQ0=11;MQRankSum=-1.275;QD=13.20;ReadPosRankSum=0.502;VQSLOD=0.7036;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:36.59:0,37,581	0/1:9,0:9:31.44:31,0,253	0/0:16,0:12:28.06:0,28,532	0/1:16,0:5:0.48:0,0,80	0/0:24,0:24:68.63:0,69,1077	1/1:14,1:15:25.47:436,25,0	1/1:16,0:16:38.71:580,39,0	0/0:29,0:29:62.21:0,62,1314	1/1:7,19:23:3.01:59,3,0	0/1:23,0:23:32.30:32,0,881	0/0:13,0:13:33.18:0,33,518	1/1:27,0:27:65.65:958,66,0	0/0:19,0:19:44.93:0,45,788	0/0:22,0:22:37.32:0,37,1212	0/1:17,0:17:28.40:28,0,599	0/1:20,0:20:10.65:11,0,557	0/1:23,0:22:44.20:44,0,678	1/1:18,2:18:45.80:688,46,0	1/1:5,13:16:43.17:585,43,0	./.	0/1:16,0:15:18.66:19,0,454	0/0:20,0:20:53.73:0,54,824	0/1:1,14:15:0.11:0,0,0	1/1:29,0:29:46.04:935,46,0	0/0:22,0:21:42.29:0,42,760	0/1:31,0:30:10.02:10,0,1422	1/1:3,22:27:11.67:178,12,0	0/0:4,0:3:8.52:0,9,100
chr10	82005047	.	TGTTG	T	95.98	PASS	AB=0.914;AC=5;AF=0.104;AN=48;BaseQRankSum=3.598;DP=713;FS=0.000;HRun=0;HaplotypeScore=128.6855;InbreedingCoeff=0.2756;MQ=71.72;MQ0=16;MQRankSum=-0.756;QD=1.10;ReadPosRankSum=-0.138;VQSLOD=2.1337;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:6.70:0,7,44	./.	./.	./.	0/0:24,0:24:20.83:0,21,352	0/0:25,0:25:7.91:0,8,72	0/1:17,9:25:31.01:168,0,31	./.	1/1:22,0:22:2.36:10,2,0	0/0:29,0:28:28.33:0,28,545	0/0:17,0:17:9.03:0,9,152	0/1:17,0:17:0.03:1,0,0	0/0:23,0:23:33.10:0,33,613	0/1:22,0:22:0.22:0,0,387	0/0:31,0:31:54.17:0,54,1032	0/0:32,0:32:57.18:0,57,1178	0/0:45,0:44:54.13:0,54,1175	0/0:35,0:33:11.80:0,12,128	0/0:19,0:19:11.06:0,11,107	0/0:17,0:16:16.94:0,17,188	0/0:49,0:46:37.84:0,38,777	0/0:18,0:18:27.08:0,27,515	0/0:17,0:16:12.44:0,12,134	0/0:36,0:36:23.28:0,23,160	0/0:26,0:26:33.11:0,33,650	0/0:26,0:26:21.07:0,21,468	0/0:26,0:24:4.87:0,5,61	0/0:3,0:1:3.01:0,3,69
chr10	82005105	.	G	GTGGT	1512.01	PASS	AB=0.965;AC=25;AF=0.543;AN=46;BaseQRankSum=-1.977;DP=825;FS=12.981;HRun=0;HaplotypeScore=126.3672;InbreedingCoeff=0.1386;MQ=38.25;MQ0=187;MQRankSum=-4.982;QD=3.04;ReadPosRankSum=-1.702;VQSLOD=1.6310;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:15:2.97:20,3,0	./.	./.	./.	./.	0/0:29,0:19:9.03:0,9,136	0/0:49,0:31:0.47:0,0,180	0/0:38,0:21:3.01:0,3,36	0/1:26,0:20:26.57:27,0,126	0/0:21,0:13:1.25:0,1,3	0/1:12,0:12:0:0,0,0	0/1:27,0:24:69.91:70,0,310	1/1:20,11:25:9.03:194,9,0	0/1:17,7:20:36.48:62,0,36	1/1:22,5:26:9.03:198,9,0	1/1:27,3:27:24.08:539,24,0	1/1:32,0:25:5.23:41,5,0	0/1:42,0:32:43.43:43,0,502	0/0:28,0:13:3.01:0,3,46	0/0:28,0:17:6.02:0,6,92	1/1:62,0:49:8.24:91,8,0	1/1:24,0:18:6.96:97,7,0	0/1:32,0:26:28.93:29,0,213	0/1:45,0:42:83.57:84,0,292	1/1:10,4:13:3.01:66,3,0	1/1:29,0:21:6.02:94,6,0	0/0:17,0:12:15.05:0,15,230	./.
chr10	82005161	.	TTGGTTGAG	T	3109.18	PASS	AB=0.841;AC=9;AF=0.161;AN=56;BaseQRankSum=4.500;DP=635;FS=0.000;HRun=0;HaplotypeScore=135.9612;InbreedingCoeff=-0.1951;MQ=42.57;MQ0=64;MQRankSum=-5.985;QD=13.46;ReadPosRankSum=-1.964;VQSLOD=2.4404;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:21:33.08:0,33,881	0/0:8,0:8:21.07:0,21,690	0/0:48,0:5:2.94:0,3,143	0/0:36,0:4:8.64:0,9,46	0/0:11,0:9:27.09:0,27,843	0/1:15,8:19:99:774,0,186	0/1:28,0:20:47.08:47,0,361	0/0:18,0:11:32.32:0,32,577	0/1:9,11:18:99:447,0,152	0/0:16,0:11:27.98:0,28,792	0/0:15,0:14:33.09:0,33,924	0/1:16,10:25:99:789,0,281	0/0:21,0:19:32.12:0,32,1080	0/0:22,0:21:33.11:0,33,956	0/0:23,0:21:41.49:0,41,1748	0/1:31,1:31:3.05:3,0,2422	0/0:29,0:26:69.17:0,69,2518	0/1:27,12:34:99:427,0,354	0/0:22,0:13:27.70:0,28,389	0/1:14,0:11:5.67:6,0,307	0/0:43,0:36:84.09:0,84,2519	0/0:13,0:10:23.91:0,24,787	0/1:18,0:15:99:423,0,211	0/1:19,12:26:99:327,0,281	0/0:10,0:10:20.81:0,21,660	0/0:18,0:16:36.12:0,36,1127	0/0:19,0:19:34.24:0,34,450	0/0:3,0:2:6.02:0,6,261
chr10	82005169	.	G	GTGGT	2673.67	PASS	AB=0.618;AC=21;AF=0.375;AN=56;BaseQRankSum=5.193;DP=629;FS=0.000;HRun=0;HaplotypeScore=111.9656;InbreedingCoeff=0.8261;MQ=45.29;MQ0=41;MQRankSum=-6.831;QD=10.96;ReadPosRankSum=-2.799;VQSLOD=2.5491;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:26:13.98:0,14,399	0/0:10,0:10:21.07:0,21,340	0/0:44,0:8:2.98:0,3,145	0/0:32,0:3:3:0,3,26	0/0:12,0:11:21.07:0,21,336	1/1:23,0:19:28.93:303,29,0	1/1:24,2:19:9.03:148,9,0	1/1:14,0:12:6:64,6,0	1/1:19,0:17:14.69:130,15,0	0/0:17,0:14:27.08:0,27,402	0/0:14,0:14:27.09:0,27,436	1/1:26,0:25:31.74:289,32,0	0/0:17,0:16:27.09:0,27,435	0/0:23,0:22:36.01:0,36,566	0/0:24,0:23:50.98:0,51,786	0/0:32,0:32:29.14:0,29,1108	0/0:29,0:26:69.22:0,69,1080	1/1:32,0:29:19.33:169,19,0	1/1:13,5:14:18.06:383,18,0	1/1:4,12:14:29.97:522,30,0	0/0:47,0:40:66.20:0,66,1043	0/0:13,0:12:24.07:0,24,355	1/1:17,0:16:16.60:136,17,0	1/1:27,0:23:17.81:150,18,0	0/0:12,0:12:18.06:0,18,290	0/0:20,0:18:19.66:0,20,517	0/1:8,11:21:11.64:590,0,12	0/0:3,0:2:6.02:0,6,97
chr10	82005197	.	G	GTGGT	600.55	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.837;DP=717;FS=5.541;HRun=0;HaplotypeScore=127.4255;InbreedingCoeff=0.8125;MQ=52.54;MQ0=33;MQRankSum=-1.336;QD=15.40;ReadPosRankSum=0.544;VQSLOD=3.0374;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,16:34:30.10:695,30,0	0/0:14,0:14:24.08:0,24,396	0/0:40,0:11:11.71:0,12,175	0/0:32,0:14:33.06:0,33,494	0/0:17,0:16:33.11:0,33,537	0/0:20,0:17:22.13:0,22,496	0/0:22,0:20:36.12:0,36,587	0/0:26,0:23:63.20:0,63,1009	0/0:18,0:16:24.44:0,24,327	0/0:21,0:19:36.12:0,36,573	0/0:17,0:16:33.10:0,33,516	0/0:28,0:27:60.37:0,60,853	0/0:22,0:21:42.14:0,42,693	0/0:28,0:27:56.82:0,57,917	0/0:37,0:36:93.15:0,93,1506	0/0:37,0:37:88.54:0,89,1417	0/0:34,0:33:66.23:0,66,1089	0/0:31,0:29:47.37:0,47,702	0/0:26,0:15:41.35:0,41,585	0/0:24,0:18:36.80:0,37,579	0/0:43,0:41:72.19:0,72,1126	0/0:18,0:16:33.11:0,33,537	0/0:21,0:21:54.18:0,54,869	0/0:32,0:30:42:0,42,630	0/0:17,0:17:45.15:0,45,740	0/0:26,0:25:57.19:0,57,920	0/0:23,0:23:16.32:0,16,476	0/0:3,0:3:3.01:0,3,50
chr10	82005727	.	A	AT	1835.37	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.618;DP=768;FS=4.919;HRun=7;HaplotypeScore=74.2730;InbreedingCoeff=0.9996;MQ=86.34;MQ0=1;MQRankSum=-5.087;QD=27.39;ReadPosRankSum=-1.496;VQSLOD=3.8318;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,35:37:96.29:1160,96,0	0/0:12,0:12:33.05:0,33,319	0/0:29,0:29:63.05:0,63,598	0/0:22,1:23:40.40:0,40,465	0/0:39,0:39:99:0,99,951	0/0:28,0:28:78.12:0,78,753	0/0:23,0:23:66.10:0,66,637	1/1:6,24:30:66.20:797,66,0	0/0:25,0:25:63.09:0,63,608	0/0:38,0:38:99:0,102,981	0/0:26,0:26:75.12:0,75,724	0/0:23,0:23:63.09:0,63,603	0/0:37,0:37:99:0,102,979	0/0:22,0:22:60.10:0,60,579	0/0:36,0:36:99:0,99,956	0/0:32,0:32:93.13:0,93,893	0/0:31,0:31:81.12:0,81,782	0/0:25,0:24:69.09:0,69,659	0/0:23,0:23:54.07:0,54,517	0/0:36,0:36:93.15:0,93,898	0/0:15,0:14:30.03:0,30,284	0/0:27,0:27:78.11:0,78,747	0/0:18,0:18:42.06:0,42,405	0/0:27,0:27:69.10:0,69,666	0/0:34,0:34:90.14:0,90,868	0/0:29,0:29:75.12:0,75,724	0/0:24,0:24:69.11:0,69,666	0/0:19,0:18:56.68:0,57,531
chr10	82006790	.	CA	C	6747.46	PASS	AB=0.944;AC=23;AF=0.411;AN=56;BaseQRankSum=13.873;DP=698;FS=11.550;HRun=9;HaplotypeScore=69.4200;InbreedingCoeff=0.9425;MQ=80.02;MQ0=0;MQRankSum=-0.946;QD=22.34;ReadPosRankSum=1.085;VQSLOD=5.1133;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:75.04:686,75,0	0/0:14,0:15:44.97:0,45,499	0/1:16,1:17:1.08:1,0,200	0/0:17,0:16:33.85:0,34,329	0/0:33,0:33:84.25:0,84,969	1/1:2,33:35:87.05:796,87,0	0/0:19,0:19:48.14:0,48,554	1/1:3,32:35:92.07:825,92,0	1/1:2,22:24:66.03:604,66,0	0/0:31,1:32:62.77:0,63,956	0/0:21,0:21:57.17:0,57,658	1/1:0,22:22:60.03:549,60,0	0/0:19,0:19:45.13:0,45,519	0/0:35,1:36:68.80:0,69,1030	0/0:27,0:27:63.17:0,63,716	0/0:31,2:33:65.80:0,66,1002	0/0:24,1:25:41.74:0,42,734	1/1:0,13:14:35.05:308,35,0	1/1:2,13:15:38.98:343,39,0	1/1:3,25:28:72.03:658,72,0	0/0:14,0:14:36.11:0,36,415	0/0:36,0:36:99:0,102,1161	1/1:2,20:22:54.02:494,54,0	1/1:2,28:30:81.04:741,81,0	0/0:24,0:24:63.19:0,63,727	0/0:34,0:34:84.21:0,84,948	1/1:0,31:31:81.04:741,81,0	0/0:10,1:11:5.65:0,6,319
chr10	82007351	.	CAT	C	1161.20	PASS	AB=0.988;AC=10;AF=0.179;AN=56;BaseQRankSum=2.576;DP=722;FS=18.638;HRun=0;HaplotypeScore=115.1505;InbreedingCoeff=0.0368;MQ=53.25;MQ0=21;MQRankSum=1.511;QD=5.50;ReadPosRankSum=-0.712;VQSLOD=1.8260;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,4:37:60.35:473,0,60	0/0:11,0:9:11.91:0,12,146	0/0:53,0:15:35.12:0,35,301	0/0:55,0:17:31.45:0,31,258	0/0:24,0:24:50.92:0,51,539	0/0:23,0:22:35.72:0,36,277	0/0:16,0:16:33:0,33,340	1/1:27,0:26:68.52:555,69,0	0/0:22,0:22:10.53:0,11,202	0/0:20,0:20:32.90:0,33,607	0/0:15,0:15:29.96:0,30,310	0/1:22,0:22:42.56:43,0,244	0/1:28,0:28:18.93:19,0,249	0/1:19,0:19:70.55:71,0,132	0/0:27,0:27:40.09:0,40,408	0/0:20,0:20:50.95:0,51,509	0/0:31,0:31:9.13:0,9,570	0/1:11,0:11:20.68:21,0,83	0/1:18,0:18:3.56:4,0,253	0/0:23,0:22:12.04:0,12,79	0/0:53,0:52:70.74:0,71,953	0/1:29,0:29:99:117,0,209	0/1:20,0:20:0.44:0,0,137	0/0:23,0:22:17.91:0,18,169	0/0:29,0:29:59.95:0,60,596	0/0:29,0:27:44.08:0,44,646	0/0:21,0:21:5.10:0,5,198	0/0:13,1:13:26.94:0,27,325
chr10	82007353	.	T	TACACACAC	1216.90	PASS	AB=0.865;AC=26;AF=0.481;AN=54;BaseQRankSum=-3.436;DP=715;FS=0.656;HRun=0;HaplotypeScore=178.0404;InbreedingCoeff=0.3308;MQ=53.21;MQ0=21;MQRankSum=-1.619;QD=3.11;ReadPosRankSum=-5.602;VQSLOD=0.7785;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:37:44.47:44,0,311	0/0:3,0:9:8.68:0,9,47	1/1:52,0:13:0.47:1,0,0	./.	0/0:10,0:23:25.69:0,26,141	1/1:20,0:19:3.01:69,3,0	0/1:8,0:23:13.12:57,0,13	1/1:24,0:23:16.70:89,17,0	1/1:21,0:21:6.02:156,6,0	0/1:12,0:22:15.66:103,0,16	0/0:8,0:15:5.16:0,5,31	1/1:22,0:22:20.97:354,21,0	0/0:16,0:27:14.92:0,15,255	0/0:10,0:19:26.16:0,26,467	0/0:15,0:27:14.78:0,15,117	0/0:14,0:21:14.72:0,15,150	0/0:17,0:32:1.92:0,2,441	0/1:12,0:12:27.29:27,0,36	1/1:20,0:20:11.09:61,11,0	1/1:14,1:23:6.02:192,6,0	0/0:35,0:55:14.53:0,15,363	0/1:17,0:29:45.05:45,0,332	1/1:19,0:19:2.85:58,3,0	1/1:21,0:20:4.54:26,5,0	0/0:15,0:27:23.51:0,24,208	0/1:23,0:24:50.45:50,0,104	1/1:12,1:19:3.48:60,3,0	0/0:9,0:12:11.82:0,12,182
chr10	82007626	.	GGCCTTA	G	13023.61	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=17.975;DP=646;FS=3.237;HRun=0;HaplotypeScore=172.3858;InbreedingCoeff=0.9948;MQ=79.06;MQ0=0;MQRankSum=-18.047;QD=52.09;ReadPosRankSum=0.327;VQSLOD=4.9465;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:39.13:954,39,0	0/0:12,0:12:33.11:0,33,1209	0/0:18,0:18:54.05:0,54,1525	0/0:22,0:22:66.20:0,66,2035	0/0:37,0:37:99:0,111,4038	1/1:2,18:20:51.18:1246,51,0	0/0:14,0:14:42.14:0,42,1535	1/1:11,25:36:75.12:1577,75,0	1/1:2,30:32:81.28:1967,81,0	0/0:27,0:27:81.28:0,81,2830	0/0:27,0:27:81.28:0,81,2962	1/1:5,18:23:48.16:1177,48,0	0/0:33,0:33:96.31:0,96,3386	0/0:29,0:29:87.30:0,87,3060	0/0:35,0:35:99:0,105,3768	0/0:27,0:27:81.28:0,81,2928	0/0:15,0:15:45.15:0,45,1562	1/1:1,6:7:15.05:350,15,0	1/1:8,14:22:40.71:973,41,0	1/1:2,34:36:99:2379,99,0	0/0:14,0:14:42.14:0,42,1498	0/0:20,0:20:60.21:0,60,2148	1/1:1,7:8:15.05:369,15,0	1/1:6,15:21:24.08:586,24,0	0/0:26,0:26:78.27:0,78,2821	0/0:31,0:31:62.31:0,62,3144	1/1:1,24:25:60.21:1446,60,0	0/0:9,0:8:24.08:0,24,833
chr10	82007861	.	CA	C	5886.48	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=11.748;DP=602;FS=0.000;HRun=9;HaplotypeScore=87.4554;InbreedingCoeff=0.9873;MQ=77.73;MQ0=0;MQRankSum=-1.068;QD=23.45;ReadPosRankSum=0.380;VQSLOD=5.1756;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:57.02:522,57,0	0/0:12,0:12:33.10:0,33,381	0/0:16,0:16:8.36:0,8,273	0/0:17,0:17:21.36:0,21,267	0/0:31,0:31:82.10:0,82,919	1/1:1,23:24:66.03:604,66,0	0/0:1,0:11:26.19:0,26,140	1/1:3,27:30:80.98:728,81,0	1/1:3,26:29:75.04:686,75,0	0/0:23,1:24:41.73:0,42,728	0/0:28,0:28:81.24:0,81,935	1/1:2,19:21:57.03:522,57,0	0/0:5,0:16:34.05:0,34,171	0/0:3,1:27:29.52:0,30,247	0/0:31,0:31:84.24:0,84,961	0/0:24,0:24:66.19:0,66,753	0/0:26,0:26:71.01:0,71,791	1/1:0,13:13:36.02:329,36,0	1/1:2,15:17:45.01:409,45,0	1/1:2,35:37:99:906,99,0	0/0:19,0:19:51.14:0,51,578	0/0:0,0:20:54.01:0,54,275	1/1:2,14:16:36.01:329,36,0	1/1:2,14:16:35.61:329,36,0	0/0:19,0:20:56.99:0,57,630	0/0:23,1:24:35.70:0,36,652	1/1:4,22:26:57.01:522,57,0	0/0:5,0:5:15.03:0,15,164
chr10	82008348	.	GGTCCC	G	5117.76	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.818;DP=728;FS=23.266;HRun=0;HaplotypeScore=138.6018;InbreedingCoeff=0.9770;MQ=74.41;MQ0=0;MQRankSum=-13.608;QD=58.82;ReadPosRankSum=0.750;VQSLOD=3.7438;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,160,5064	0/0:14,0:14:39.13:0,39,1253	0/0:21,0:21:60.20:0,60,1823	0/0:12,0:11:26.43:0,26,706	0/0:39,0:39:99:0,117,3803	1/1:0,20:20:54.19:1239,54,0	0/0:21,0:21:63.22:0,63,1912	0/0:48,0:48:99:0,144,4503	1/1:0,16:16:39.13:893,39,0	0/0:31,0:31:93.32:0,93,3024	0/0:40,0:40:99:0,120,3689	1/1:0,23:23:63.22:1459,63,0	0/0:29,0:29:87.30:0,87,2867	0/0:31,0:31:93.32:0,93,3028	0/0:39,0:39:99:0,117,3791	0/0:31,0:31:93.23:0,93,2982	0/0:14,0:14:42.13:0,42,1297	1/1:0,5:5:15.05:349,15,0	0/0:20,0:20:60.19:0,60,1821	0/0:29,0:29:87.30:0,87,2898	0/0:42,0:42:99:0,126,3868	0/0:19,0:19:57.17:0,57,1730	1/1:1,15:16:45.15:1036,45,0	1/1:0,5:5:6.58:141,7,0	0/0:36,0:36:99:0,108,3415	0/0:23,0:23:69.22:0,69,2135	0/0:36,0:36:99:0,108,3427	0/0:11,0:11:33.11:0,33,991
chr10	82008488	.	TC	T	5967.36	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=15.467;DP=620;FS=0.311;HRun=7;HaplotypeScore=93.3543;InbreedingCoeff=0.9857;MQ=77.01;MQ0=0;MQRankSum=-12.042;QD=23.04;ReadPosRankSum=-3.100;VQSLOD=3.2528;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:27:53.48:182,53,0	0/0:8,0:8:24.06:0,24,287	0/0:24,0:23:47:0,47,529	0/0:23,0:21:32.10:0,32,396	0/0:35,0:35:96.22:0,96,1123	1/1:6,13:19:45.07:448,45,0	1/1:1,14:15:33.07:336,33,0	1/1:6,30:36:99:1055,105,0	1/1:4,13:17:47.93:447,48,0	0/0:18,0:18:51.14:0,51,606	0/0:20,0:20:54.10:0,54,632	1/1:5,15:20:53.83:523,54,0	0/0:32,0:32:87.25:0,87,1062	0/0:25,0:25:66.19:0,66,788	0/0:23,0:23:60.14:0,60,723	0/0:24,0:24:63.20:0,63,788	0/0:20,0:20:57.08:0,57,669	1/1:2,2:4:11.15:77,11,0	1/1:10,14:24:56.99:536,57,0	1/1:11,24:35:92.13:849,92,0	0/0:29,1:30:50.60:0,51,896	0/0:23,0:23:68.97:0,69,799	1/1:7,16:23:57.07:558,57,0	1/1:4,3:7:9.01:86,9,0	0/0:18,0:18:48.15:0,48,601	0/0:31,0:31:78.18:0,78,905	1/1:6,25:31:89.99:870,90,0	0/0:7,0:7:21:0,21,243
chr10	82008512	.	CT	C	7562.45	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.906;DP=653;FS=0.637;HRun=3;HaplotypeScore=91.3305;InbreedingCoeff=0.9891;MQ=87.14;MQ0=0;MQRankSum=-11.442;QD=30.25;ReadPosRankSum=-0.676;VQSLOD=4.0852;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:54.12:648,54,0	0/0:12,0:12:36.08:0,36,478	0/0:35,0:34:77.60:0,78,1219	0/0:23,0:22:47.97:0,48,598	0/0:39,0:39:99:0,117,1666	1/1:2,19:21:57.06:666,57,0	0/0:16,0:16:41.88:0,42,574	1/1:10,23:33:78.22:941,78,0	1/1:1,17:18:45.14:556,45,0	0/0:21,0:21:60.19:0,60,840	0/0:21,0:21:63.20:0,63,877	1/1:1,21:22:57.18:704,57,0	0/0:23,0:23:66.17:0,66,898	0/0:27,0:27:75.23:0,75,1045	0/0:26,0:26:75.24:0,75,1061	0/0:24,0:24:69.21:0,69,958	0/0:26,0:26:72.21:0,72,999	1/1:1,3:4:9.03:111,9,0	1/1:7,21:28:63.16:745,63,0	1/1:1,33:34:93.14:1095,93,0	0/0:30,0:30:90.26:0,90,1239	0/0:25,0:25:72.23:0,72,1019	1/1:1,25:26:72.21:876,72,0	1/1:1,6:7:15.05:185,15,0	0/0:20,0:20:60.16:0,60,809	0/0:27,0:27:78.25:0,78,1105	1/1:2,30:32:84.26:1036,84,0	0/0:8,0:8:24.07:0,24,327
chr10	82009079	.	T	TA	4912.65	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-13.377;DP=551;FS=3.137;HRun=8;HaplotypeScore=52.6302;InbreedingCoeff=0.9136;MQ=81.12;MQ0=0;MQRankSum=-2.083;QD=27.60;ReadPosRankSum=2.630;VQSLOD=5.5547;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:45.01:0,45,407	0/0:6,0:6:18.01:0,18,165	0/0:18,0:19:35.98:0,36,323	0/0:18,0:17:29.63:0,30,268	0/0:29,0:29:81.03:0,81,737	1/1:0,11:11:27.08:312,27,0	1/1:2,9:13:8.32:313,8,0	0/0:28,0:28:62.99:0,63,564	1/1:2,22:24:41.74:734,42,0	0/0:29,0:29:84.02:0,84,763	0/0:29,0:29:84.04:0,84,768	1/1:2,12:14:36.11:416,36,0	0/0:26,0:26:69.03:0,69,631	0/0:29,0:29:87.03:0,87,791	0/0:28,0:28:78.04:0,78,714	0/0:19,1:21:24.43:0,24,461	0/0:24,0:24:69:0,69,621	1/1:0,9:9:24.07:277,24,0	1/1:1,18:19:54.14:604,54,0	1/1:2,15:17:39.08:436,39,0	0/0:9,0:9:27.01:0,27,247	0/0:14,0:14:30.01:0,30,271	1/1:1,19:20:51.15:589,51,0	1/1:1,7:8:18.05:208,18,0	0/0:18,0:18:53.94:0,54,476	0/0:31,0:31:71.99:0,72,648	1/1:5,34:39:65.81:1011,66,0	0/1:4,0:4:13.43:13,0,70
chr10	82009880	.	CGTGT	C	5168.44	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-0.171;DP=573;FS=5.592;HRun=0;HaplotypeScore=107.3706;InbreedingCoeff=0.9006;MQ=62.91;MQ0=6;MQRankSum=1.301;QD=21.90;ReadPosRankSum=4.464;VQSLOD=4.0916;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:27:47.62:0,48,881	1/1:2,2:4:9.03:141,9,0	0/0:23,0:12:9.03:0,9,144	0/1:24,0:11:3.78:7,0,4	1/1:6,11:19:26.21:413,26,0	0/0:11,0:24:30.57:0,31,537	0/0:17,0:21:12.03:0,12,191	0/0:21,0:20:21.06:0,21,371	0/0:5,0:17:24.08:0,24,420	1/1:14,14:29:41.43:636,41,0	1/1:9,15:24:36:525,36,0	0/0:10,0:21:36.12:0,36,646	0/0:13,0:25:51.05:0,51,895	0/0:9,0:20:36.10:0,36,619	1/1:9,13:22:30.57:482,31,0	1/1:5,18:23:54.18:867,54,0	1/1:13,15:29:26.66:635,27,0	0/0:11,0:12:15.05:0,15,259	0/0:18,0:19:25.06:0,25,476	0/0:21,0:21:45.12:0,45,976	1/1:8,6:14:12.04:193,12,0	0/0:14,0:28:36.12:0,36,662	0/0:5,0:15:21.07:0,21,359	0/0:15,0:23:42.14:0,42,795	1/1:4,17:24:48.14:710,48,0	1/1:8,11:20:36.09:513,36,0	0/0:18,0:19:41.88:0,42,874	1/1:0,2:2:3.01:48,3,0
chr10	82011057	.	AGAG	A	3532.79	PASS	AB=0.732;AC=16;AF=0.308;AN=52;BaseQRankSum=10.258;DP=522;FS=5.418;HRun=0;HaplotypeScore=89.6126;InbreedingCoeff=0.7987;MQ=67.24;MQ0=3;MQRankSum=-5.343;QD=20.19;ReadPosRankSum=-7.658;VQSLOD=1.0926;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:27:19.75:20,0,240	0/0:7,0:7:18.01:0,18,299	0/0:25,0:17:4.90:0,5,558	0/0:17,0:11:21.91:0,22,379	0/0:27,0:27:75.17:0,75,1374	1/1:0,17:19:12.04:190,12,0	1/1:0,0:16:17.86:154,18,0	0/0:16,0:15:31.91:0,32,436	1/1:16,1:16:38.04:308,38,0	0/0:23,0:23:57.96:0,58,1033	0/0:13,0:13:36.04:0,36,603	1/1:11,1:16:39.58:574,40,0	0/0:25,0:25:57.73:0,58,1318	0/0:18,0:18:44.98:0,45,785	0/0:14,0:14:35.78:0,36,739	0/0:20,0:20:42.10:0,42,837	0/0:19,0:19:57.07:0,57,1099	./.	0/1:2,12:14:10.34:339,0,10	1/1:4,10:17:42.63:467,43,0	0/0:19,0:19:54.16:0,54,1098	0/0:19,0:19:46.46:0,46,818	1/1:14,5:24:63.10:707,63,0	./.	0/0:26,0:26:65.47:0,65,1293	0/0:25,0:24:66.17:0,66,1378	1/1:10,3:21:57.35:774,57,0	0/0:12,0:12:27.01:0,27,513
chr10	82011059	.	AGAG	A	3141.14	PASS	AB=0.941;AC=15;AF=0.288;AN=52;BaseQRankSum=10.436;DP=504;FS=11.791;HRun=0;HaplotypeScore=87.3545;InbreedingCoeff=0.8964;MQ=66.73;MQ0=3;MQRankSum=-3.367;QD=21.66;ReadPosRankSum=-5.974;VQSLOD=1.1137;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:36.32:0,36,706	0/0:6,0:6:18.06:0,18,377	0/0:24,0:17:18.04:0,18,678	0/0:16,0:10:26.45:0,26,514	0/0:28,0:28:75.26:0,75,1726	1/1:19,0:19:12.04:189,12,0	1/1:11,0:16:20.76:168,21,0	0/0:16,0:15:33.11:0,33,675	1/1:16,0:15:32.05:283,32,0	0/0:21,0:21:60.10:0,60,1267	0/0:12,0:12:33.11:0,33,770	1/1:15,0:15:39.11:562,39,0	0/0:24,0:24:69.24:0,69,1629	0/0:15,0:15:39.13:0,39,911	0/0:13,0:13:36.11:0,36,873	0/0:19,0:19:42.14:0,42,1021	0/0:20,0:20:54.19:0,54,1271	./.	0/1:15,1:14:28.27:301,0,28	1/1:14,3:17:27.14:400,27,0	0/0:19,0:19:57.20:0,57,1351	0/0:18,0:18:45.09:0,45,964	1/1:21,1:23:56.99:661,57,0	./.	0/0:24,0:24:69.22:0,69,1558	0/0:24,0:23:66.23:0,66,1614	1/1:16,5:21:55.88:770,56,0	0/0:10,0:10:30.10:0,30,684
chr10	82011218	.	GTC	G	1372.15	PASS	AB=0.985;AC=18;AF=0.346;AN=52;BaseQRankSum=-4.763;DP=497;FS=4.267;HRun=0;HaplotypeScore=92.1238;InbreedingCoeff=-0.2176;MQ=47.53;MQ0=23;MQRankSum=-1.166;QD=4.50;ReadPosRankSum=-8.947;VQSLOD=-0.4271;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	./.	0/1:10,0:10:62.13:74,0,62	./.	0/0:22,0:8:3.08:0,3,111	0/1:14,0:12:67.04:100,0,67	0/0:22,1:20:21.32:0,21,264	1/1:17,0:13:9.24:68,9,0	1/1:41,0:38:85.73:590,86,0	0/0:17,0:15:29.93:0,30,339	0/1:29,0:28:94.82:95,0,296	0/1:22,1:22:85.85:86,0,189	0/0:13,0:12:24.03:0,24,320	0/1:17,0:15:60.15:60,0,171	0/1:19,0:18:43.35:43,0,194	0/1:15,0:15:82.20:82,0,150	0/1:17,2:19:79.91:80,0,153	0/1:10,0:10:25.11:25,0,81	0/1:12,0:12:30.03:30,0,181	0/0:16,0:14:30.06:0,30,304	0/0:14,0:13:27.63:0,28,329	0/1:28,0:23:51.95:52,0,211	0/1:14,0:13:13.19:13,0,185	0/0:13,0:13:27.05:0,27,345	0/0:17,0:17:28.82:0,29,570	0/1:13,1:13:7.87:8,0,97	0/1:23,0:22:99:128,0,240	0/0:15,0:15:30.13:0,30,309	0/0:9,0:9:8.12:0,8,174
chr10	82011403	.	G	GA	9885.35	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=3.953;DP=580;FS=3.167;HRun=1;HaplotypeScore=68.0970;InbreedingCoeff=0.9998;MQ=83.24;MQ0=0;MQRankSum=-1.036;QD=43.93;ReadPosRankSum=2.463;VQSLOD=4.9558;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:72.25:1152,72,0	0/0:10,0:10:30.10:0,30,420	0/0:21,0:21:57.19:0,57,786	0/0:14,0:14:33.11:0,33,449	0/0:31,0:31:90.29:0,90,1241	1/1:2,13:15:36.11:552,36,0	1/1:0,23:22:63.21:1007,63,0	0/0:37,0:37:99:0,111,1518	1/1:2,19:21:60.16:928,60,0	0/0:23,0:23:69.23:0,69,964	0/0:26,0:26:75.25:0,75,1045	1/1:0,20:20:54.18:863,54,0	0/0:18,0:18:54.18:0,54,753	0/0:20,0:20:60.19:0,60,822	0/0:20,0:20:57.19:0,57,797	0/0:17,0:17:48.15:0,48,654	0/0:26,0:26:75.25:0,75,1045	1/1:1,13:14:42.14:671,42,0	1/1:1,14:15:45.15:703,45,0	1/1:1,20:21:57.19:911,57,0	0/0:11,0:11:33.11:0,33,462	0/0:27,0:27:81.27:0,81,1133	1/1:0,27:27:75.23:1199,75,0	1/1:0,16:16:42.14:671,42,0	0/0:26,0:26:78.26:0,78,1090	0/0:14,0:14:39.13:0,39,544	1/1:1,24:25:78.26:1228,78,0	0/0:14,0:14:39.09:0,39,523
chr10	82011473	.	AT	A	3868.69	PASS	AB=0.881;AC=22;AF=0.393;AN=56;BaseQRankSum=6.655;DP=544;FS=15.213;HRun=11;HaplotypeScore=74.8092;InbreedingCoeff=0.8465;MQ=79.85;MQ0=0;MQRankSum=-2.427;QD=17.12;ReadPosRankSum=2.945;VQSLOD=3.2770;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:22:50.66:0,51,277	0/1:9,2:11:16.21:16,0,249	0/1:20,2:21:34.96:35,0,220	0/0:20,0:20:29.55:0,30,265	0/0:20,0:21:57.08:0,57,581	1/1:3,18:21:50.93:419,51,0	1/1:3,18:23:58:455,58,0	0/0:12,0:43:99:0,103,574	1/1:3,20:24:58.95:474,59,0	0/0:25,0:25:63.16:0,63,672	0/0:15,1:16:17.40:0,17,365	1/1:3,14:17:44.95:369,45,0	0/0:15,1:16:14.45:0,14,353	0/0:18,0:18:48.07:0,48,492	0/0:20,0:20:51.11:0,51,536	0/0:15,0:15:36.09:0,36,384	0/0:25,0:25:66.17:0,66,704	1/1:2,7:9:20.97:172,21,0	1/1:4,13:17:38.92:320,39,0	1/1:2,11:14:34.97:277,35,0	0/0:7,0:7:21.03:0,21,210	0/0:13,0:13:33.08:0,33,352	1/1:7,13:21:40.96:326,41,0	1/1:1,13:14:41.92:340,42,0	0/0:26,0:26:66.15:0,66,691	0/0:20,0:20:45.11:0,45,480	1/1:4,29:32:80.89:665,81,0	0/0:11,0:11:24.06:0,24,256
chr10	82011823	.	GC	G	7746.04	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=19.410;DP=618;FS=1.763;HRun=1;HaplotypeScore=105.9136;InbreedingCoeff=0.9991;MQ=70.62;MQ0=0;MQRankSum=-1.831;QD=35.37;ReadPosRankSum=2.769;VQSLOD=4.8365;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,163,2590	0/0:10,0:10:30.10:0,30,480	0/0:13,0:13:38.94:0,39,547	0/0:13,0:13:27.01:0,27,458	0/0:22,0:22:66.22:0,66,1050	1/1:2,19:21:51.28:651,51,0	1/1:0,23:23:57.18:729,57,0	0/0:38,0:38:99:0,111,1753	1/1:0,17:17:48.16:621,48,0	0/0:20,0:20:60.20:0,60,941	0/0:20,0:20:60.19:0,60,933	1/1:0,30:30:84.27:1076,84,0	0/0:18,0:18:54.15:0,54,810	0/0:21,0:21:63.21:0,63,1002	0/0:24,0:24:72.25:0,72,1151	0/0:29,0:29:87.28:0,87,1366	0/0:31,0:31:93.30:0,93,1463	1/1:0,17:17:51.16:660,51,0	1/1:0,20:20:60.19:782,60,0	1/1:3,20:23:67.07:827,67,0	0/0:23,0:23:66.23:0,66,1055	0/0:19,0:19:57.18:0,57,889	1/1:0,23:23:63.20:814,63,0	1/1:0,19:19:51.16:652,51,0	0/0:14,0:14:42.13:0,42,645	0/0:23,0:23:66.23:0,66,1056	1/1:0,26:26:72.23:934,72,0	0/0:7,0:7:21.07:0,21,336
chr10	82011920	.	T	TC	3889.07	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=16.501;DP=710;FS=3.307;HRun=0;HaplotypeScore=158.1929;InbreedingCoeff=0.9863;MQ=85.31;MQ0=0;MQRankSum=-17.650;QD=23.01;ReadPosRankSum=1.143;VQSLOD=4.0984;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,166,2267	0/0:11,0:11:33.07:0,33,439	0/0:43,0:42:99:0,117,1592	0/0:20,0:20:54.60:0,55,704	0/0:32,0:32:90.29:0,90,1243	1/1:5,11:16:44.84:381,45,0	1/1:4,16:20:59.77:495,60,0	0/0:35,0:35:99:0,102,1385	1/1:10,14:24:68.38:534,68,0	0/0:40,0:40:99:0,117,1572	0/0:21,0:21:63.20:0,63,864	1/1:2,18:20:56.87:497,57,0	0/0:35,0:35:99:0,105,1413	0/0:33,0:33:99:0,99,1368	0/0:31,0:31:93.31:0,93,1299	0/0:27,0:27:81.27:0,81,1133	0/0:31,0:31:93.31:0,93,1297	1/1:0,3:3:9.02:93,9,0	1/1:0,14:14:40.87:364,41,0	1/1:5,14:19:56.81:467,57,0	0/0:30,0:30:90.28:0,90,1227	0/0:36,0:36:99:0,108,1477	1/1:8,13:21:56.58:446,57,0	1/1:3,7:10:11.78:100,12,0	0/0:26,0:26:78.26:0,78,1089	0/0:25,0:25:75.25:0,75,1049	1/1:6,16:22:59.77:511,60,0	0/0:10,0:10:30.07:0,30,383
chr10	82011923	.	TAGGAA	T	6128.23	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=16.576;DP=652;FS=0.000;HRun=0;HaplotypeScore=191.3504;InbreedingCoeff=0.9706;MQ=87.39;MQ0=0;MQRankSum=-16.023;QD=53.29;ReadPosRankSum=4.618;VQSLOD=4.8949;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,160,4962	0/0:13,0:13:39.13:0,39,1256	0/0:42,0:41:99:0,123,3579	0/0:20,0:20:48.55:0,49,1655	0/0:32,0:32:96.33:0,96,3080	1/1:0,11:11:30.10:560,30,0	1/1:0,16:16:48.16:891,48,0	0/0:33,0:33:99:0,99,3065	1/1:1,14:15:45.15:825,45,0	0/0:40,0:40:99:0,117,3728	0/0:20,0:20:60.21:0,60,1890	1/1:0,18:18:51.17:951,51,0	0/0:34,0:34:99:0,102,3200	0/0:33,0:33:99:0,99,3109	0/0:32,0:32:96.31:0,96,2953	0/0:28,0:28:84.29:0,84,2694	0/0:31,0:31:93.29:0,93,2935	1/1:0,3:3:9.03:173,9,0	1/1:0,2:2:6.02:113,6,0	1/1:0,14:14:42.14:780,42,0	0/0:31,0:31:93.32:0,93,2943	0/0:34,0:34:99:0,102,3261	1/1:0,13:13:39.13:718,39,0	1/1:0,7:7:12.04:222,12,0	0/0:26,0:26:78.26:0,78,2304	0/0:26,0:26:78.26:0,78,2430	1/1:0,16:16:48.16:896,48,0	0/0:8,0:8:24.08:0,24,783
chr10	82011930	.	TGAACTGATG	T	8933.47	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=16.626;DP=655;FS=0.376;HRun=0;HaplotypeScore=237.9145;InbreedingCoeff=0.9715;MQ=87.10;MQ0=0;MQRankSum=-16.175;QD=77.68;ReadPosRankSum=3.923;VQSLOD=4.8285;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,148,7269	0/0:13,0:13:39.13:0,39,1838	0/0:38,0:37:99:0,111,4666	0/0:25,0:25:71.22:0,71,2654	0/0:36,0:36:99:0,108,5069	1/1:0,11:11:30.10:811,30,0	1/1:0,16:16:48.16:1297,48,0	0/0:36,0:36:99:0,108,5254	1/1:1,14:15:45.15:1207,45,0	0/0:41,0:41:99:0,123,5958	0/0:24,0:24:72.25:0,72,3462	1/1:0,18:18:51.18:1381,51,0	0/0:34,0:34:99:0,99,4699	0/0:33,0:33:96.33:0,96,4302	0/0:32,0:32:96.31:0,96,4480	0/0:31,0:31:93.32:0,93,4681	0/0:31,0:31:93.32:0,93,4544	1/1:0,3:3:9.03:247,9,0	1/1:0,2:2:6.02:164,6,0	1/1:0,14:14:42.14:1137,42,0	0/0:28,0:28:84.29:0,84,4184	0/0:35,0:35:99:0,105,5015	1/1:0,13:13:39.13:1057,39,0	1/1:0,7:7:12.93:325,13,0	0/0:20,0:20:60.19:0,60,2829	0/0:25,0:25:75.24:0,75,3501	1/1:0,16:16:48.16:1306,48,0	0/0:9,0:9:27.09:0,27,1352
chr10	82012655	.	C	CTGT	3394.31	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.412;DP=772;FS=1.175;HRun=0;HaplotypeScore=107.1746;InbreedingCoeff=0.8509;MQ=85.37;MQ0=0;MQRankSum=-3.093;QD=57.53;ReadPosRankSum=0.153;VQSLOD=5.5860;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,55:59:99:3394,138,0	0/0:15,0:15:45.15:0,45,839	0/0:31,0:31:93.32:0,93,1707	0/0:21,0:21:58.74:0,59,1049	0/0:26,0:26:75.26:0,75,1398	0/0:34,0:34:99:0,99,1798	0/0:26,0:26:78.27:0,78,1412	0/0:37,0:37:99:0,105,1945	0/0:26,0:26:78.27:0,78,1447	0/0:26,0:26:78.27:0,78,1435	0/0:27,0:27:81.27:0,81,1466	0/0:28,0:28:84.28:0,84,1525	0/0:28,0:28:81.28:0,81,1509	0/0:33,0:33:99:0,99,1846	0/0:29,0:29:87.28:0,87,1585	0/0:26,0:26:78.26:0,78,1426	0/0:30,0:30:87.30:0,87,1601	0/0:17,0:17:51.17:0,51,950	0/0:19,0:19:54.18:0,54,968	0/0:30,0:30:90.30:0,90,1639	0/0:46,0:46:99:0,129,2389	0/0:22,0:22:63.22:0,63,1173	0/0:29,0:29:87.28:0,87,1585	0/0:36,0:36:99:0,105,1945	0/0:23,0:23:66.23:0,66,1228	0/0:28,0:28:84.29:0,84,1562	0/0:19,0:18:54.12:0,54,937	0/0:1,0:1:3.01:0,3,56
chr10	82012776	.	G	GA	14971.72	PASS	AB=0.905;AC=25;AF=0.446;AN=56;BaseQRankSum=-16.142;DP=778;FS=5.806;HRun=0;HaplotypeScore=70.5058;InbreedingCoeff=0.9272;MQ=84.28;MQ0=0;MQRankSum=-1.157;QD=41.59;ReadPosRankSum=1.972;VQSLOD=5.6164;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:42:99:1822,114,0	0/0:16,0:16:48.16:0,48,667	0/0:30,0:30:87.24:0,87,1157	0/0:16,0:16:48.14:0,48,630	0/0:33,0:33:99:0,99,1382	1/1:1,25:26:75.26:1199,75,0	1/1:2,27:29:72.25:1151,72,0	1/1:0,32:32:96.30:1488,96,0	1/1:0,29:29:81.28:1295,81,0	0/0:31,0:31:93.30:0,93,1285	0/0:23,0:23:66.22:0,66,920	1/1:0,24:24:69.24:1103,69,0	0/0:46,0:46:99:0,138,1925	0/0:34,0:34:96.30:0,96,1323	0/0:41,0:41:99:0,120,1660	0/0:29,0:29:87.26:0,87,1182	0/1:17,2:19:41.76:42,0,617	1/1:0,14:14:36.12:576,36,0	1/1:1,21:22:66.19:1022,66,0	1/1:2,28:30:78.27:1247,78,0	0/0:36,0:36:99:0,102,1405	0/0:28,0:28:84.27:0,84,1157	1/1:0,29:29:84.29:1342,84,0	1/1:0,37:37:96.33:1535,96,0	0/0:29,0:29:87.27:0,87,1194	0/0:19,0:19:54.18:0,54,755	1/1:1,26:27:72.25:1151,72,0	0/0:7,0:7:21.07:0,21,293
chr10	82013333	.	GA	G	632.79	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.704;DP=530;FS=0.796;HRun=7;HaplotypeScore=63.3513;InbreedingCoeff=0.9980;MQ=83.74;MQ0=0;MQRankSum=-0.165;QD=24.34;ReadPosRankSum=-3.569;VQSLOD=2.4907;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:35.86:0,36,282	0/0:15,0:15:39.12:0,39,491	0/0:13,0:13:33.10:0,33,405	0/0:21,0:20:45.08:0,45,527	0/0:27,0:27:75.21:0,75,914	0/0:21,0:21:57.17:0,57,705	0/0:16,0:16:39.12:0,39,491	1/1:2,24:26:72.15:728,72,0	0/0:17,0:17:45.14:0,45,566	0/0:17,0:17:45.14:0,45,566	0/0:16,0:16:45.11:0,45,547	0/0:14,0:14:36.11:0,36,441	0/0:21,0:21:63.19:0,63,781	0/0:20,0:20:57.17:0,57,703	0/0:16,0:16:42.13:0,42,528	0/0:21,0:20:60.19:0,60,754	0/0:30,0:30:87.28:0,87,1094	0/0:17,0:17:45.14:0,45,563	0/0:18,0:18:48.15:0,48,592	0/0:29,0:29:80.61:0,81,978	0/0:21,0:21:60.19:0,60,754	0/0:21,0:21:54.17:0,54,677	0/0:13,0:13:36.11:0,36,441	0/0:14,0:14:36.10:0,36,440	0/0:18,0:18:54.17:0,54,669	0/0:25,0:25:63.15:0,63,754	0/0:20,0:20:54.17:0,54,676	0/0:9,0:9:27.09:0,27,340
chr10	82013832	.	AG	A	1329.77	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.931;DP=651;FS=0.644;HRun=1;HaplotypeScore=62.4817;InbreedingCoeff=0.9438;MQ=91.27;MQ0=0;MQRankSum=-2.372;QD=37.99;ReadPosRankSum=-4.202;VQSLOD=2.4196;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.29:0,90,1399	0/0:9,0:9:27.09:0,27,432	0/0:30,0:30:90.29:0,90,1399	0/0:26,0:26:74.73:0,75,1110	0/0:21,0:21:63.21:0,63,1005	0/0:33,0:32:99:0,99,1531	0/0:17,0:17:51.17:0,51,815	1/1:0,35:35:99:1425,102,0	0/0:29,0:29:84.29:0,84,1340	0/0:39,0:39:99:0,117,1871	0/0:29,0:29:84.29:0,84,1342	0/0:10,0:10:30.10:0,30,480	0/0:22,0:22:66.21:0,66,1032	0/0:23,0:23:69.22:0,69,1080	0/0:12,0:12:36.11:0,36,553	0/0:21,0:21:63.19:0,63,975	0/0:27,0:27:81.24:0,81,1239	0/0:25,0:25:72.25:0,72,1150	0/0:20,0:20:60.19:0,60,914	0/0:38,0:38:99:0,114,1822	0/0:16,0:16:48.16:0,48,767	0/0:27,0:27:81.26:0,81,1265	0/0:25,0:25:75.26:0,75,1193	0/0:22,0:22:66.23:0,66,1055	0/0:20,0:20:60.20:0,60,957	0/0:15,0:15:45.14:0,45,698	0/0:27,0:27:81.28:0,81,1288	0/0:3,0:3:9.03:0,9,144
chr10	82015038	.	C	CT	2306.31	PASS	AB=0.853;AC=27;AF=0.519;AN=52;BaseQRankSum=9.792;DP=396;FS=7.183;HRun=0;HaplotypeScore=244.3224;InbreedingCoeff=0.1493;MQ=32.79;MQ0=6;MQRankSum=-2.841;QD=8.39;ReadPosRankSum=1.948;VQSLOD=2.7949;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,7:15:12.81:146,13,0	0/1:6,3:9:65.96:91,0,66	./.	./.	0/1:11,10:21:26.64:56,0,27	1/1:13,3:16:28.64:278,29,0	0/0:8,1:14:7.41:0,7,45	1/1:4,0:3:8.89:83,9,0	1/1:6,1:7:0.73:62,1,0	0/0:19,1:20:12.54:0,13,448	1/1:11,4:14:6.20:75,6,0	1/1:12,2:14:25.08:249,25,0	0/0:15,0:25:8.98:0,9,83	0/1:14,2:16:76.51:77,0,84	0/1:13,3:16:25.75:109,0,26	0/0:18,0:17:13.62:0,14,84	0/0:15,0:15:3.65:0,4,136	0/0:11,0:11:0.63:0,1,21	0/1:10,0:10:5.03:121,0,5	0/1:18,1:18:5.91:120,0,6	0/0:11,0:11:12.83:0,13,108	0/1:17,1:18:28.49:28,0,77	1/1:16,1:16:16.31:180,16,0	1/1:15,1:16:4.97:157,5,0	0/1:19,6:25:99:225,0,136	0/1:14,4:17:99:102,0,224	1/1:17,2:18:32.68:317,33,0	0/0:3,0:2:6.01:0,6,56
chr10	82015080	.	CA	C	653.80	PASS	AB=0.842;AC=11;AF=0.196;AN=56;BaseQRankSum=7.582;DP=751;FS=1.770;HRun=1;HaplotypeScore=179.5197;InbreedingCoeff=-0.2253;MQ=41.32;MQ0=26;MQRankSum=-8.438;QD=2.20;ReadPosRankSum=-0.014;VQSLOD=-0.7556;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,2:26:23.66:0,24,432	0/1:17,7:24:99:181,0,553	0/0:32,0:5:12.04:0,12,191	0/0:41,0:12:32.97:0,33,470	0/0:40,6:46:77.33:0,77,1252	0/0:21,0:21:58.31:0,58,429	0/0:20,0:20:48.16:0,48,766	0/1:21,8:25:99:227,0,719	0/1:14,1:15:2.59:3,0,235	0/1:28,3:31:32.05:32,0,1205	0/0:25,6:31:14.80:0,15,805	0/0:19,2:21:16.47:0,16,360	0/0:23,0:23:69.24:0,69,1100	0/1:31,3:34:3.61:4,0,958	0/0:24,2:25:23:0,23,959	0/0:23,3:25:27.65:0,28,1012	0/0:26,0:26:66.13:0,66,997	0/0:19,0:19:33.87:0,34,312	0/1:12,2:13:9.11:9,0,199	0/1:29,7:35:8.35:8,0,409	0/0:19,0:18:45.15:0,45,715	0/0:26,5:31:11.32:0,11,968	0/1:22,8:30:36.82:37,0,396	0/0:23,0:24:57.51:0,58,454	0/1:31,10:41:99:148,0,788	0/1:32,5:36:98.03:98,0,1304	0/0:22,0:21:59.74:0,60,432	0/1:4,2:6:47.11:47,0,172
chr10	82016004	.	GTGT	G	346.76	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.149;DP=591;FS=2.950;HRun=0;HaplotypeScore=107.5511;InbreedingCoeff=0.9659;MQ=81.29;MQ0=0;MQRankSum=1.463;QD=26.67;ReadPosRankSum=-0.366;VQSLOD=3.7854;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:39.13:0,39,859	0/0:7,0:7:15.05:0,15,332	0/0:21,0:21:51.17:0,51,1074	0/0:20,0:20:54.19:0,54,1126	0/0:31,0:31:87.28:0,87,1885	0/0:25,0:25:51.14:0,51,1051	1/1:1,12:13:27.09:441,27,0	0/0:33,0:33:93.26:0,93,1898	0/0:24,0:23:69.19:0,69,1458	0/0:18,0:18:48.16:0,48,1064	0/0:31,0:31:87.25:0,87,1781	0/0:16,0:16:39.09:0,39,804	0/0:19,0:19:57.20:0,57,1256	0/0:14,0:14:42.14:0,42,930	0/0:16,0:16:45.15:0,45,997	0/0:29,0:29:84.29:0,84,1816	0/0:20,0:20:57.20:0,57,1231	0/0:12,0:12:24.01:0,24,475	0/0:27,0:26:72.24:0,72,1521	0/0:28,0:28:78.21:0,78,1626	0/0:19,0:19:57.18:0,57,1198	0/0:25,0:25:69.24:0,69,1514	0/0:25,0:25:51.11:0,51,1037	0/0:7,0:7:15.05:0,15,331	0/0:18,0:18:48.15:0,48,1003	0/0:36,0:36:99:0,105,2288	0/0:30,0:30:78.27:0,78,1699	0/0:10,0:10:30.10:0,30,665
chr10	82016034	.	TACACAC	T	8694.87	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.257;DP=559;FS=0.000;HRun=0;HaplotypeScore=123.8735;InbreedingCoeff=0.9859;MQ=71.15;MQ0=0;MQRankSum=-15.342;QD=44.14;ReadPosRankSum=0.130;VQSLOD=4.7035;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,17:24:51.09:963,51,0	0/0:3,0:3:9.03:0,9,312	0/0:32,0:30:71.62:0,72,2092	0/0:16,0:16:42.11:0,42,1211	0/0:32,0:32:87.28:0,87,2910	1/1:0,26:26:60.20:1297,60,0	0/0:13,0:13:33.11:0,33,1059	0/0:30,0:30:81.25:0,81,2491	1/1:3,20:23:51.17:1123,51,0	0/0:15,0:14:42.14:0,42,1456	0/0:23,0:24:66.23:0,66,2069	1/1:1,14:15:30.10:588,30,0	0/0:17,0:17:51.16:0,51,1584	0/0:15,0:15:45.15:0,45,1437	0/0:25,0:25:72.22:0,72,2263	0/0:27,0:27:57.24:0,57,2359	0/0:20,0:21:53.20:0,53,1710	1/1:0,6:6:15.05:339,15,0	1/1:3,15:18:45.09:866,45,0	1/1:3,21:24:51.12:986,51,0	0/0:19,0:19:51.10:0,51,1567	0/0:26,0:26:75.26:0,75,2513	1/1:3,18:21:36.12:722,36,0	1/1:1,8:9:14.98:277,15,0	0/0:10,0:10:24.07:0,24,694	0/0:29,0:29:81.25:0,81,2548	1/1:2,28:30:69.24:1532,69,0	0/0:8,0:8:24.08:0,24,831
chr10	82016196	.	GC	G	5785.12	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.638;DP=551;FS=12.189;HRun=6;HaplotypeScore=73.2011;InbreedingCoeff=0.9989;MQ=89.89;MQ0=0;MQRankSum=-4.388;QD=26.78;ReadPosRankSum=3.524;VQSLOD=4.5900;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:31:69.17:741,69,0	0/0:11,0:11:33.08:0,33,406	0/0:25,0:25:69.22:0,69,906	0/0:24,0:24:53.65:0,54,664	0/0:24,0:24:57.13:0,57,690	1/1:0,22:22:54.14:580,54,0	0/0:17,0:17:45.15:0,45,592	1/1:1,17:18:48.10:508,48,0	1/1:0,13:13:39.10:419,39,0	0/0:19,0:19:51.15:0,51,639	0/0:21,0:21:63.17:0,63,776	1/1:0,13:13:33.08:355,33,0	0/0:17,0:17:51.17:0,51,671	0/0:21,0:21:60.19:0,60,781	0/0:25,0:25:75.23:0,75,973	0/0:21,0:21:57.19:0,57,750	0/0:26,0:26:78.22:0,78,1008	1/1:1,9:10:24.06:258,24,0	1/1:2,14:16:39.09:419,39,0	1/1:1,24:25:63.14:669,63,0	0/0:23,0:23:60.17:0,60,760	0/0:18,0:18:48.10:0,48,550	1/1:2,19:21:51.13:548,51,0	1/1:2,15:17:39.10:419,39,0	0/0:11,0:11:30.09:0,30,381	0/0:25,0:25:75.19:0,75,900	1/1:2,28:30:81.20:870,81,0	0/0:7,0:7:21.02:0,21,243
chr10	82016885	.	GCACACACA	G	6425.56	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=9.116;DP=396;FS=11.430;HRun=0;HaplotypeScore=105.0027;InbreedingCoeff=0.8903;MQ=53.42;MQ0=8;MQRankSum=-9.696;QD=40.67;ReadPosRankSum=-0.040;VQSLOD=3.8970;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:7:9.03:168,9,0	0/0:2,0:1:3.01:0,3,96	0/0:29,0:15:36.54:0,37,1095	0/0:28,0:16:28.65:0,29,858	0/0:15,0:17:45.15:0,45,1742	1/1:5,13:18:27.09:699,27,0	0/0:3,0:12:20.78:0,21,730	1/1:19,14:33:42.07:877,42,0	1/1:2,7:9:21.07:550,21,0	0/0:25,0:25:69.24:0,69,2907	0/0:7,0:7:18.06:0,18,759	1/1:1,8:10:27.09:684,27,0	0/0:0,0:7:18.05:0,18,344	0/0:1,0:5:12.04:0,12,261	0/0:9,0:10:30.10:0,30,1204	0/0:13,0:13:36.12:0,36,1408	0/0:14,0:14:36.12:0,36,1459	1/1:11,0:11:6.12:146,6,0	1/1:10,15:26:48.16:1211,48,0	1/1:2,8:10:15.05:393,15,0	0/0:10,0:11:24.08:0,24,951	0/0:0,0:2:6.01:0,6,90	1/1:0,4:4:9.03:236,9,0	1/1:0,1:2:3.01:56,3,0	0/0:17,0:18:48.16:0,48,1939	0/0:28,0:28:81.28:0,81,3233	1/1:6,22:28:54.18:1407,54,0	0/0:8,0:8:15.05:0,15,588
chr10	82017211	.	CTG	C	279.40	PASS	AB=0.949;AC=24;AF=0.522;AN=46;BaseQRankSum=3.915;DP=666;FS=1.991;HRun=0;HaplotypeScore=116.2456;InbreedingCoeff=0.0320;MQ=66.48;MQ0=18;MQRankSum=-2.001;QD=0.76;ReadPosRankSum=1.225;VQSLOD=2.3873;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:13.52:0,14,88	0/1:8,0:8:25.12:25,0,39	./.	0/0:39,0:22:0:0,0,0	0/1:14,1:15:11.93:12,0,198	1/1:24,0:24:2.84:14,3,0	0/0:26,0:25:9.18:0,9,52	0/0:33,0:32:1.83:0,2,4	1/1:21,0:21:2.84:14,3,0	0/0:14,0:14:12.04:0,12,172	0/0:17,0:17:8.24:0,8,96	./.	1/1:33,0:33:2.84:14,3,0	1/1:25,0:25:2.84:14,3,0	0/1:27,0:26:15.82:16,0,200	0/1:21,5:26:38.35:38,0,240	0/1:28,3:31:99:116,0,312	0/1:20,0:20:0.87:8,0,1	./.	./.	0/1:39,1:38:62.23:62,0,195	1/1:18,0:17:2.80:13,3,0	./.	1/1:32,0:32:0.89:2,1,0	0/0:25,0:25:11.81:0,12,321	0/1:17,1:18:17.71:18,0,125	1/1:27,0:27:2.84:14,3,0	1/1:4,0:3:3.01:33,3,0
chr10	82017239	.	GTGTGTGTGTGTGTGTTTGTGTGTGTATGTGTGTATGTGTGTGTA	G	2164.92	PASS	AB=0.913;AC=12;AF=0.214;AN=56;BaseQRankSum=1.315;DP=603;FS=5.267;HRun=0;HaplotypeScore=417.0648;InbreedingCoeff=0.0327;MQ=47.64;MQ0=26;MQRankSum=-5.589;QD=8.98;ReadPosRankSum=-2.401;VQSLOD=0.7469;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:36.44:0,36,1567	0/0:8,0:8:15.05:0,15,2180	0/0:12,0:2:5.97:0,6,248	0/0:20,0:1:3.01:0,3,124	0/0:18,0:17:38.25:0,38,5541	0/1:33,0:33:39.93:270,0,40	0/0:29,0:26:47.17:0,47,4063	0/1:30,0:24:76.22:76,0,1904	0/1:31,0:31:11.09:272,0,11	0/0:23,0:23:66.23:0,66,7805	0/0:12,0:12:17.78:0,18,1704	0/1:7,0:7:15.41:30,0,15	0/1:11,17:28:63.58:322,0,64	0/1:22,0:22:16.96:273,0,17	0/0:25,0:23:49.80:0,50,6172	0/0:27,0:27:69.71:0,70,7853	0/0:36,0:35:99:0,100,11819	0/1:10,9:19:99:318,0,352	0/0:11,0:9:24.47:0,24,294	0/0:9,0:8:0.22:0,0,0	0/0:44,0:41:79.08:0,79,9744	1/1:11,0:10:3.01:278,3,0	0/0:6,0:5:3.01:0,3,67	1/1:41,0:41:2.55:246,3,0	0/0:24,0:24:53.65:0,54,7603	0/0:17,0:17:48.16:0,48,6293	0/1:19,0:18:99:224,0,117	0/0:10,0:7:18.06:0,18,2454
chr10	82017241	.	GTGTGTGTGTGTGTTTGTGTGTGTATGTGTGTATGTGTGTGTA	G	2553.62	PASS	AB=0.923;AC=19;AF=0.339;AN=56;BaseQRankSum=1.066;DP=584;FS=3.223;HRun=0;HaplotypeScore=388.8365;InbreedingCoeff=0.4541;MQ=48.81;MQ0=27;MQRankSum=-5.400;QD=11.30;ReadPosRankSum=-2.719;VQSLOD=0.2458;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:45.43:0,45,1441	0/0:8,0:8:15.05:0,15,2041	0/0:14,0:3:5.99:0,6,234	0/0:19,0:2:6.02:0,6,287	0/0:18,0:17:39.79:0,40,5309	1/1:7,17:24:3.01:325,3,0	0/0:29,0:26:48.42:0,48,3704	0/1:21,0:24:99:198,0,1419	1/1:10,20:30:2.87:324,3,0	0/0:25,0:25:72.23:0,72,7927	0/0:11,0:11:14.72:0,15,1584	1/1:5,0:5:5.99:49,6,0	1/1:27,0:27:2.34:303,2,0	1/1:6,15:21:3.01:325,3,0	0/0:25,0:23:48.33:0,48,5820	0/0:28,0:28:72.72:0,73,7657	0/0:38,0:37:99:0,107,11405	0/1:18,0:18:99:290,0,249	0/0:10,0:9:3.35:0,3,63	1/1:6,0:5:2.68:28,3,0	0/0:43,0:40:76.82:0,77,9203	1/1:4,6:9:3.01:324,3,0	0/0:5,0:4:2.99:0,3,24	1/1:11,26:37:2.48:292,2,0	0/0:23,0:23:55.96:0,56,7286	0/0:16,0:16:48.16:0,48,5990	0/1:18,0:17:7.54:257,0,8	0/0:11,0:7:18.06:0,18,2337
chr10	82017243	.	GTGTGTGTGTGTTTGTGTGTGTATGTGTGTATGTGTGTGTA	G	2501.41	PASS	AB=1.000;AC=20;AF=0.370;AN=54;BaseQRankSum=1.232;DP=517;FS=0.000;HRun=0;HaplotypeScore=321.0339;InbreedingCoeff=0.5151;MQ=50.77;MQ0=27;MQRankSum=-6.531;QD=14.80;ReadPosRankSum=-2.538;VQSLOD=1.1549;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:43.18:0,43,1100	0/0:8,0:8:15.04:0,15,1915	0/0:13,0:3:5.98:0,6,211	0/0:20,0:3:9.03:0,9,316	0/0:19,0:18:44.68:0,45,5252	1/1:17,0:17:3.01:291,3,0	0/0:30,0:27:50.06:0,50,3750	0/1:29,0:23:99:285,0,952	1/1:20,0:20:2.85:290,3,0	0/0:25,0:25:68.60:0,69,7532	0/0:9,0:9:14.72:0,15,1488	1/1:3,0:3:0.94:1,1,0	1/1:17,0:17:2.39:290,2,0	1/1:15,0:15:3.01:291,3,0	0/0:24,0:22:49.82:0,50,5654	0/0:28,0:28:72.70:0,73,7081	0/0:36,0:35:94.67:0,95,10737	0/1:13,0:13:99:276,0,204	0/0:6,0:5:1.51:0,2,4	1/1:4,0:3:3.01:73,3,0	0/0:43,0:40:77.57:0,78,8963	1/1:7,0:6:3.01:290,3,0	./.	1/1:27,0:27:3.01:260,3,0	0/0:23,0:23:58.17:0,58,6860	0/0:17,0:17:51.17:0,51,5862	1/1:5,12:16:3.01:311,3,0	0/0:11,0:7:18.06:0,18,2230
chr10	82018817	.	G	GAT	12112.29	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=11.453;DP=619;FS=4.253;HRun=0;HaplotypeScore=105.4602;InbreedingCoeff=0.9906;MQ=79.80;MQ0=0;MQRankSum=-2.471;QD=37.04;ReadPosRankSum=0.118;VQSLOD=6.8942;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:28:41.25:373,41,0	0/0:11,0:11:30.10:0,30,386	0/0:21,0:21:41.07:0,41,461	0/0:14,0:14:40.88:0,41,467	0/0:20,0:20:51.15:0,51,641	1/1:3,19:22:51.17:860,51,0	1/1:5,0:11:18.01:159,18,0	1/1:3,29:32:87.26:1389,87,0	1/1:3,20:23:60.21:1012,60,0	0/0:31,0:31:46.46:0,46,1060	0/0:26,0:26:78.25:0,78,1003	1/1:3,22:25:60.21:1012,60,0	1/1:4,24:31:69.06:1160,69,0	1/1:3,17:20:39.13:658,39,0	0/0:27,0:27:72.22:0,72,912	0/0:27,0:27:60.19:0,60,760	0/0:23,1:24:12.81:0,13,673	1/1:1,8:10:24.08:405,24,0	1/1:5,15:20:45.14:748,45,0	1/1:1,26:29:63.21:1049,63,0	0/0:21,0:21:57.19:0,57,732	1/1:1,18:19:51.17:859,51,0	1/1:0,17:17:48.16:809,48,0	1/1:1,13:14:30.10:506,30,0	0/0:34,0:34:96.31:0,96,1235	0/0:32,0:32:81.21:0,81,1001	1/1:1,25:26:66.23:1112,66,0	0/0:4,0:4:12.04:0,12,154
chr10	82020244	.	GCA	G	571.32	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.156;DP=851;FS=8.712;HRun=0;HaplotypeScore=158.5262;InbreedingCoeff=0.9921;MQ=86.07;MQ0=0;MQRankSum=-6.985;QD=21.97;ReadPosRankSum=-2.986;VQSLOD=2.7829;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,153,3037	0/0:16,0:16:48.16:0,48,975	0/0:30,0:30:87.29:0,87,1696	0/0:26,0:26:75.21:0,75,1463	0/0:23,0:23:69.24:0,69,1401	0/0:26,0:26:78.25:0,78,1532	0/0:34,0:34:99:0,102,2011	1/1:2,23:26:65.87:666,66,0	0/0:46,0:46:99:0,138,2802	0/0:41,0:41:99:0,123,2451	0/0:19,0:19:57.18:0,57,1110	0/0:26,0:26:78.27:0,78,1583	0/0:32,0:32:96.26:0,96,1827	0/0:36,0:36:99:0,108,2193	0/0:35,0:35:99:0,105,2080	0/0:39,0:39:99:0,117,2377	0/0:34,0:34:99:0,102,2064	0/0:15,0:15:45.15:0,45,914	0/0:24,0:24:66.23:0,66,1310	0/0:30,0:30:90.31:0,90,1826	0/0:39,0:39:99:0,117,2293	0/0:32,0:32:96.33:0,96,1932	0/0:31,0:31:93.29:0,93,1811	0/0:26,0:26:75.24:0,75,1483	0/0:34,0:34:99:0,102,2057	0/0:42,0:42:99:0,126,2527	0/0:32,0:32:96.31:0,96,1909	0/0:6,0:6:18.06:0,18,366
chr10	82020247	.	TA	T	414.69	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.262;DP=854;FS=4.156;HRun=1;HaplotypeScore=139.5846;InbreedingCoeff=0.9921;MQ=85.97;MQ0=0;MQRankSum=-7.798;QD=17.28;ReadPosRankSum=-2.717;VQSLOD=3.0643;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,154,2446	0/0:16,0:16:48.16:0,48,767	0/0:30,0:30:84.08:0,84,1244	0/0:26,0:26:72.24:0,72,1113	0/0:24,0:24:72.25:0,72,1149	0/0:25,0:25:75.24:0,75,1175	0/0:33,0:33:99:0,99,1535	1/1:1,23:24:62.88:510,63,0	0/0:47,0:47:99:0,138,2181	0/0:43,0:43:99:0,129,2002	0/0:19,0:19:57.19:0,57,910	0/0:28,0:28:84.25:0,84,1292	0/0:30,0:30:90.29:0,90,1413	0/0:36,0:36:99:0,108,1702	0/0:35,0:35:99:0,102,1629	0/0:41,0:41:99:0,123,1965	0/0:36,0:36:99:0,108,1701	0/0:15,0:15:45.15:0,45,714	0/0:22,0:22:63.19:0,63,979	0/0:32,0:32:96.26:0,96,1439	0/0:38,0:38:99:0,114,1821	0/0:33,0:33:96.33:0,96,1534	0/0:33,0:33:99:0,99,1576	0/0:25,0:25:72.25:0,72,1151	0/0:33,0:33:99:0,99,1581	0/0:41,0:41:99:0,123,1967	0/0:32,0:32:96.28:0,96,1463	0/0:6,0:6:18.06:0,18,288
chr10	82020783	.	G	GTCCA	11080.01	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-9.812;DP=660;FS=2.588;HRun=0;HaplotypeScore=100.8860;InbreedingCoeff=0.8360;MQ=66.82;MQ0=9;MQRankSum=4.562;QD=22.85;ReadPosRankSum=0.718;VQSLOD=4.8095;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,19:35:27.09:640,27,0	1/1:8,3:12:6.02:142,6,0	0/1:28,0:19:12.51:13,0,79	0/0:41,0:24:2.84:0,3,14	1/1:11,14:25:42.14:889,42,0	1/1:11,20:32:39.13:925,39,0	0/0:15,0:15:21.07:0,21,328	1/1:36,0:36:7.35:61,7,0	1/1:12,20:33:38.97:908,39,0	1/1:9,10:22:39.12:783,39,0	1/1:7,7:14:15.05:356,15,0	1/1:6,9:17:27.09:638,27,0	0/0:2,0:19:33.77:0,34,236	0/0:6,0:18:20.82:0,21,181	1/1:13,14:29:24.08:569,24,0	1/1:10,16:29:24.08:569,24,0	1/1:9,20:31:39.13:913,39,0	1/1:13,9:22:24.08:537,24,0	0/0:20,0:18:18.04:0,18,282	0/0:17,0:17:27.08:0,27,393	1/1:7,12:20:24.08:569,24,0	0/0:4,0:17:19.09:0,19,122	1/1:8,13:21:24.08:569,24,0	1/1:9,18:27:33.11:783,33,0	1/1:6,11:17:9.03:214,9,0	1/1:12,12:25:40.37:787,40,0	0/0:26,0:26:45.15:0,45,707	1/1:7,1:8:9.03:213,9,0
chr10	82021753	.	TA	T	2178.02	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.488;DP=644;FS=2.729;HRun=6;HaplotypeScore=72.3154;InbreedingCoeff=0.9982;MQ=81.40;MQ0=0;MQRankSum=-3.332;QD=28.29;ReadPosRankSum=-2.698;VQSLOD=3.2131;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:54.14:580,54,0	0/0:11,0:11:33.11:0,33,434	0/0:20,0:20:35.23:0,35,615	0/0:14,0:14:39.05:0,39,469	0/0:33,0:33:93.29:0,93,1208	0/0:26,0:26:69.22:0,69,908	1/1:1,22:23:63.16:677,63,0	1/1:0,34:34:99:1064,99,0	0/0:17,0:17:48.14:0,48,617	0/0:34,0:34:96.30:0,96,1238	0/0:19,0:19:57.19:0,57,750	0/0:25,0:25:69.22:0,69,906	0/0:21,0:21:60.18:0,60,775	0/0:19,0:19:54.12:0,54,678	0/0:21,0:21:60.20:0,60,789	0/0:27,0:26:75.19:0,75,952	0/0:36,0:36:99:0,108,1406	0/0:14,0:14:39.06:0,39,476	0/0:25,0:25:72.18:0,72,901	0/0:19,0:19:51.15:0,51,655	0/0:10,0:10:30.10:0,30,394	0/0:27,0:27:72.21:0,72,920	0/0:30,0:30:75.23:0,75,972	0/0:15,0:15:42.14:0,42,553	0/0:32,0:32:90.28:0,90,1171	0/0:28,0:27:81.26:0,81,1054	0/0:37,0:37:99:0,102,1327	0/0:7,0:7:21.07:0,21,276
chr10	82023666	.	AT	A	11173.22	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=18.368;DP=731;FS=1.216;HRun=2;HaplotypeScore=105.1965;InbreedingCoeff=0.9986;MQ=87.88;MQ0=0;MQRankSum=-3.651;QD=36.04;ReadPosRankSum=0.215;VQSLOD=4.7062;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,181,2676	0/0:7,0:7:18.04:0,18,249	0/0:27,0:27:81.26:0,81,1192	0/0:24,0:24:66.20:0,66,955	0/0:19,0:19:57.19:0,57,853	1/1:0,34:34:87.28:1130,87,0	0/0:31,0:31:93.31:0,93,1372	0/0:34,0:34:96.32:0,96,1420	1/1:0,24:24:69.22:896,69,0	0/0:30,0:30:87.29:0,87,1295	0/0:18,0:18:54.15:0,54,752	1/1:1,39:40:99:1441,111,0	1/1:0,33:33:96.31:1246,96,0	1/1:0,31:31:84.27:1084,84,0	0/0:32,0:32:96.30:0,96,1396	0/0:23,0:23:69.21:0,69,995	0/0:27,0:27:78.22:0,78,1120	1/1:0,13:13:39.13:506,39,0	1/1:0,21:21:63.14:783,63,0	1/1:0,24:24:66.21:857,66,0	0/0:24,0:24:66.22:0,66,988	1/1:0,25:25:63.20:818,63,0	1/1:0,23:23:66.21:856,66,0	1/1:1,24:25:72.23:935,72,0	0/0:28,0:28:84.24:0,84,1218	0/0:27,0:27:81.27:0,81,1197	1/1:0,17:17:48.16:623,48,0	0/0:8,0:8:24.08:0,24,359
chr10	82025734	.	ATGAGGTCCCATTTG	A	1977.30	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.838;DP=732;FS=5.915;HRun=0;HaplotypeScore=274.5048;InbreedingCoeff=0.9988;MQ=61.05;MQ0=4;MQRankSum=-3.618;QD=61.79;ReadPosRankSum=-4.535;VQSLOD=2.0034;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.33:0,96,6271	0/0:9,0:9:27.09:0,27,1841	0/0:27,0:23:66.22:0,66,3669	0/0:28,0:25:69.24:0,69,3839	0/0:27,0:27:78.26:0,78,5415	0/0:31,0:31:90.31:0,90,6197	0/0:18,0:18:51.16:0,51,3310	1/1:3,29:32:86.95:2072,87,0	0/0:23,0:23:69.24:0,69,4644	0/0:31,0:30:90.31:0,90,6244	0/0:26,0:26:78.27:0,78,5195	0/0:21,0:21:63.22:0,63,4193	0/0:24,0:24:69.15:0,69,4302	0/0:22,0:22:63.22:0,63,4483	0/0:34,0:34:99:0,102,7010	0/0:22,0:22:66.21:0,66,4441	0/0:46,0:46:99:0,138,8908	0/0:23,0:23:69.24:0,69,4323	0/0:22,0:21:63.20:0,63,3468	0/0:35,0:35:96.33:0,96,6331	0/0:16,0:16:42.14:0,42,2799	0/0:31,0:31:84.29:0,84,5327	0/0:18,0:18:48.16:0,48,3260	0/0:21,0:21:63.20:0,63,4206	0/0:32,0:32:93.30:0,93,6001	0/0:33,0:33:99:0,99,6480	0/0:36,0:35:99:0,108,7177	0/0:12,0:12:36.12:0,36,2397
chr10	82028634	.	A	AGATT	592.28	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=0.325;DP=753;FS=8.600;HRun=0;HaplotypeScore=230.8677;InbreedingCoeff=0.1401;MQ=55.98;MQ0=11;MQRankSum=-3.581;QD=2.73;ReadPosRankSum=-0.471;VQSLOD=1.4394;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:4.66:181,5,0	0/0:9,0:9:8.95:0,9,120	0/0:43,0:14:34.55:0,35,353	0/0:27,0:13:27.22:0,27,371	0/0:34,0:34:35.97:0,36,519	0/0:23,0:22:27.89:0,28,225	1/1:2,11:14:2.40:17,2,0	0/0:38,0:38:99:0,105,841	0/1:35,0:34:75.73:76,0,331	0/0:28,0:27:72.50:0,73,950	0/0:19,0:19:20.78:0,21,256	0/1:29,0:29:99:137,0,202	0/0:40,0:40:94.57:0,95,1202	0/0:27,0:27:54.79:0,55,629	0/0:35,0:35:39.13:0,39,610	0/0:27,0:27:33.10:0,33,500	0/0:12,0:12:36:0,36,401	0/1:30,0:28:21.86:22,0,330	0/1:31,0:27:99:175,0,349	0/1:28,0:28:13:13,0,269	0/0:25,0:25:42.07:0,42,543	0/0:30,0:30:9.78:0,10,504	0/0:27,0:25:29.79:0,30,245	0/0:22,0:22:23.76:0,24,193	0/0:37,0:36:48.15:0,48,731	0/0:28,0:28:80.86:0,81,1009	0/1:28,0:28:99:112,0,302	0/0:5,0:5:15.02:0,15,211
chr10	82028643	.	GATAA	G	8810.24	PASS	AB=0.997;AC=40;AF=0.714;AN=56;BaseQRankSum=-12.777;DP=722;FS=16.174;HRun=0;HaplotypeScore=197.0206;InbreedingCoeff=-0.1015;MQ=54.61;MQ0=12;MQRankSum=5.423;QD=13.27;ReadPosRankSum=-3.957;VQSLOD=2.2919;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:99:127,0,105	1/1:0,8:8:5.70:113,6,0	0/0:34,0:8:14.08:0,14,93	0/0:24,0:10:10.21:0,10,127	1/1:1,31:32:39.13:654,39,0	1/1:24,0:23:16.93:234,17,0	1/1:15,0:14:2.46:33,2,0	1/1:32,0:32:59.63:598,60,0	0/1:35,0:34:99:244,0,353	1/1:3,27:29:78.10:1130,78,0	1/1:2,21:23:7.91:220,8,0	0/1:26,0:26:99:107,0,420	0/1:38,0:38:99:232,0,585	0/1:26,0:26:99:175,0,209	1/1:1,32:33:39.13:716,39,0	1/1:1,27:28:30.10:568,30,0	1/1:8,4:12:35.96:441,36,0	0/1:27,0:25:99:230,0,146	0/1:27,0:23:99:256,0,146	0/1:27,0:27:70.02:206,0,70	1/1:1,20:21:27.09:510,27,0	0/1:30,0:30:99:242,0,199	1/1:26,0:24:23.75:200,24,0	1/1:21,0:21:18.42:145,18,0	1/1:4,38:41:44.94:829,45,0	0/1:26,1:27:99:290,0,315	0/1:26,0:26:90.08:277,0,90	0/1:6,0:6:32.94:33,0,121
chr10	82028834	.	AAGAGACGAATCAG	A	1838.46	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.444;DP=677;FS=9.416;HRun=0;HaplotypeScore=243.6856;InbreedingCoeff=0.9911;MQ=80.54;MQ0=0;MQRankSum=-5.937;QD=61.28;ReadPosRankSum=0.636;VQSLOD=2.0692;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,7:12:15.05:594,15,0	0/0:10,0:10:27.09:0,27,1351	0/0:22,0:22:44.55:0,45,2987	0/0:26,0:25:35.67:0,36,3222	0/0:34,0:34:99:0,99,6339	0/0:29,0:29:75.26:0,75,4695	1/1:3,15:18:36.12:1363,36,0	0/0:23,0:23:66.22:0,66,3039	0/0:18,0:18:51.18:0,51,2708	0/0:34,0:34:93.31:0,93,5488	0/0:25,0:25:72.23:0,72,4199	0/0:19,0:19:54.19:0,54,3107	0/0:32,0:32:87.30:0,87,5473	0/0:17,0:17:48.16:0,48,3076	0/0:26,0:26:78.25:0,78,4677	0/0:21,0:21:60.20:0,60,3640	0/0:23,0:23:57.20:0,57,3273	0/0:21,0:21:63.22:0,63,4094	0/0:23,0:23:63.21:0,63,3661	0/0:31,0:31:84.29:0,84,5108	0/0:26,0:26:75.26:0,75,4707	0/0:33,0:33:99:0,99,6405	0/0:37,0:36:99:0,105,6428	0/0:20,0:20:60.21:0,60,3732	0/0:25,0:25:69.24:0,69,4172	0/0:25,0:25:72.25:0,72,4376	0/0:27,0:27:78.25:0,78,4450	0/0:19,0:19:57.20:0,57,3399
chr10	82029282	.	GT	G	2113.81	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.179;DP=698;FS=3.311;HRun=7;HaplotypeScore=78.2491;InbreedingCoeff=0.9962;MQ=73.10;MQ0=0;MQRankSum=0.899;QD=26.76;ReadPosRankSum=-1.718;VQSLOD=3.6687;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:69.16:704,69,0	0/0:12,0:12:33.11:0,33,413	0/0:21,0:21:57.18:0,57,695	0/0:18,0:18:44.69:0,45,477	0/0:21,0:21:57.14:0,57,699	0/0:31,0:31:90.29:0,90,1132	1/1:1,23:24:63.14:643,63,0	1/1:0,30:30:90.19:910,90,0	0/0:22,0:22:63.20:0,63,791	0/0:36,0:36:90.29:0,90,1129	0/0:20,0:20:42.13:0,42,528	0/0:16,0:16:45.14:0,45,566	0/0:38,0:38:99:0,108,1336	0/0:25,0:25:69.20:0,69,839	0/0:32,0:31:93.29:0,93,1155	0/0:34,0:34:96.29:0,96,1178	0/0:28,0:27:78.23:0,78,967	0/0:18,0:18:48.11:0,48,586	0/0:19,1:20:23.57:0,24,611	0/0:34,0:34:93.28:0,93,1153	0/0:22,0:22:63.17:0,63,765	0/0:21,0:21:54.16:0,54,667	0/0:32,0:32:87.27:0,87,1081	0/0:19,0:19:51.16:0,51,638	0/0:22,0:22:63.20:0,63,792	0/0:28,0:28:60.84:0,61,943	0/0:43,0:43:99:0,117,1453	0/0:6,0:6:18:0,18,195
chr10	82029966	.	T	TGG	2515.95	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.549;DP=689;FS=5.453;HRun=3;HaplotypeScore=97.4698;InbreedingCoeff=0.9984;MQ=82.03;MQ0=0;MQRankSum=-6.537;QD=39.31;ReadPosRankSum=-0.037;VQSLOD=3.0826;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,32:43:87.30:1663,87,0	0/0:9,0:9:27.09:0,27,411	0/0:30,0:30:90.30:0,90,1337	0/0:23,0:23:69.23:0,69,1011	0/0:24,0:24:63.20:0,63,941	0/0:27,0:27:81.27:0,81,1236	1/1:3,17:21:51.17:974,51,0	0/0:40,0:40:99:0,120,1650	0/0:23,0:23:69.19:0,69,982	0/0:24,0:24:69.23:0,69,1039	0/0:17,0:17:48.11:0,48,725	0/0:23,0:23:69.22:0,69,1034	0/0:27,0:27:81.26:0,81,1214	0/0:29,0:29:87.28:0,87,1307	0/0:40,0:40:99:0,117,1789	0/0:17,0:17:48.15:0,48,714	0/0:39,0:39:99:0,111,1653	0/0:23,0:23:63.21:0,63,965	0/0:27,0:27:81.23:0,81,1176	0/0:14,0:14:42.14:0,42,642	0/0:25,0:25:75.24:0,75,1124	0/0:19,0:19:57.19:0,57,869	0/0:19,0:19:57.19:0,57,869	0/0:26,0:26:75.25:0,75,1145	0/0:19,0:19:57.19:0,57,863	0/0:18,0:18:54.18:0,54,827	0/0:35,0:35:99:0,102,1536	0/0:8,0:8:24.08:0,24,367
chr10	82030614	.	C	CA	3887.31	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-15.037;DP=757;FS=6.168;HRun=6;HaplotypeScore=73.4675;InbreedingCoeff=0.9957;MQ=86.96;MQ0=0;MQRankSum=-1.424;QD=32.94;ReadPosRankSum=-3.158;VQSLOD=2.4993;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:3,44:47:99:1472,117,0	0/0:7,0:7:21.05:0,21,214	0/0:32,0:33:74.12:0,74,709	0/0:18,0:18:41.67:0,42,400	0/0:28,0:28:75.17:0,75,765	0/0:22,0:22:66.10:0,66,651	1/1:2,31:33:87.28:1095,87,0	1/1:3,35:38:99:1321,105,0	0/0:30,0:30:78.17:0,78,796	0/0:37,0:37:99:0,102,1036	0/0:24,0:24:63.11:0,63,634	0/0:24,0:24:72.15:0,72,728	0/0:18,0:18:51.07:0,51,504	0/0:28,0:28:81.15:0,81,812	0/0:26,0:26:75.17:0,75,765	0/0:27,0:27:72.14:0,72,721	0/0:28,0:28:75.17:0,75,765	0/0:26,0:26:72.16:0,72,735	0/0:25,0:25:75.15:0,75,757	0/0:37,0:37:99:0,105,1044	0/0:20,0:20:51.11:0,51,520	0/0:37,0:37:99:0,105,1065	0/0:20,0:20:54.12:0,54,551	0/0:32,0:32:90.20:0,90,918	0/0:25,0:25:66.14:0,66,673	0/0:22,0:22:63.13:0,63,638	0/0:39,0:39:99:0,105,1065	0/0:6,0:6:18.04:0,18,184
chr10	82031837	.	T	TTA	4910.28	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-3.897;DP=575;FS=7.318;HRun=0;HaplotypeScore=91.9419;InbreedingCoeff=0.7270;MQ=78.11;MQ0=4;MQRankSum=3.330;QD=20.81;ReadPosRankSum=-0.064;VQSLOD=4.9647;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:47.18:0,47,392	0/0:8,0:8:24.08:0,24,334	0/0:37,0:17:24.95:0,25,201	0/1:34,0:22:5.80:6,0,93	0/0:32,0:32:92.55:0,93,1089	1/1:0,23:25:40.69:704,41,0	0/0:16,0:16:41.95:0,42,358	0/0:27,0:27:64.32:0,64,273	1/1:1,13:16:28.23:454,28,0	0/0:34,0:36:99:0,105,1252	0/0:18,0:19:51.37:0,51,644	1/1:0,9:10:21.07:379,21,0	0/1:17,0:17:32.99:33,0,84	0/0:14,0:14:0.65:0,1,84	0/0:25,0:25:75.10:0,75,943	0/0:24,0:24:68.96:0,69,790	0/0:20,0:22:63.13:0,63,816	1/1:1,9:12:21.07:385,21,0	1/1:1,2:23:62.71:624,63,0	1/1:0,3:25:69.01:833,69,0	0/0:4,0:4:8.98:0,9,105	0/1:19,0:19:60.60:72,0,61	1/1:0,18:20:44.91:727,45,0	1/1:2,0:2:6:57,6,0	0/0:16,0:17:38.35:0,38,589	0/0:30,0:30:89.25:0,89,975	1/1:3,1:33:51.11:635,51,0	0/0:9,0:9:26.94:0,27,291
chr10	82031844	.	AAAAAG	A	2664.85	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=3.431;DP=575;FS=8.089;HRun=0;HaplotypeScore=129.1158;InbreedingCoeff=0.7897;MQ=77.02;MQ0=4;MQRankSum=-5.190;QD=28.65;ReadPosRankSum=-0.217;VQSLOD=2.4864;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:48.16:999,48,0	0/0:9,0:9:27.09:0,27,837	0/0:38,0:18:41.10:0,41,742	0/1:32,0:20:20.52:21,0,351	0/0:31,0:31:93.28:0,93,2639	0/0:20,0:20:45.14:0,45,1164	1/1:0,14:14:30.10:623,30,0	1/1:29,0:29:79.40:1171,79,0	0/0:17,0:17:39.12:0,39,992	0/0:37,0:37:99:0,108,3046	0/0:20,0:20:60.17:0,60,1689	0/0:9,0:9:23.44:0,23,529	0/0:18,0:18:54.17:0,54,1478	0/0:14,0:14:42.14:0,42,1255	0/0:25,0:25:75.26:0,75,2306	0/0:24,0:24:72.21:0,72,2038	0/0:24,0:24:68.97:0,69,1790	0/0:12,0:12:30.09:0,30,795	0/0:22,0:22:65.33:0,65,1462	0/0:25,0:25:67.83:0,68,1595	0/0:7,0:7:21.06:0,21,537	0/0:19,0:19:57.19:0,57,1673	0/0:23,0:23:62.94:0,63,1282	0/0:1,0:1:2.96:0,3,19	0/0:18,0:18:54.17:0,54,1535	0/0:30,0:30:90.27:0,90,2693	0/0:31,0:31:57.14:0,57,1471	0/0:8,0:8:24.08:0,24,774
chr10	82031845	.	AAAAG	A	1983.25	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=5.393;DP=574;FS=10.108;HRun=0;HaplotypeScore=120.9312;InbreedingCoeff=0.8080;MQ=76.44;MQ0=4;MQRankSum=-4.593;QD=22.04;ReadPosRankSum=-0.424;VQSLOD=2.8633;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:48.14:577,48,0	0/0:9,0:9:27.09:0,27,707	0/0:38,0:18:40.08:0,40,616	0/1:30,0:19:7.77:8,0,326	0/0:32,0:32:96.27:0,96,2305	0/0:20,0:20:45.14:0,45,980	1/1:14,0:14:30.08:334,30,0	1/1:1,27:28:81.18:1211,81,0	0/0:17,0:17:39.11:0,39,826	0/0:37,0:37:99:0,108,2611	0/0:20,0:20:60.17:0,60,1451	0/0:10,0:10:24.52:0,25,448	0/0:19,0:19:57.15:0,57,1276	0/0:14,0:14:42.14:0,42,1058	0/0:25,0:25:75.24:0,75,1967	0/0:26,0:26:78.20:0,78,1777	0/0:24,0:24:68.88:0,69,1532	0/0:12,0:12:30.09:0,30,672	0/0:21,0:21:59.93:0,60,1199	0/0:25,0:25:45.59:0,46,1255	0/0:7,0:7:21.04:0,21,449	0/0:19,0:19:55.07:0,55,1411	0/0:23,0:23:62.91:0,63,1105	0/0:1,0:1:2.92:0,3,17	0/0:18,0:18:54.17:0,54,1301	0/0:29,0:29:87.30:0,87,2269	0/0:30,0:30:57.14:0,57,1243	0/0:8,0:8:24.08:0,24,662
chr10	82032438	.	T	TA	2476.90	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.064;DP=664;FS=0.969;HRun=6;HaplotypeScore=58.8139;InbreedingCoeff=0.9538;MQ=74.47;MQ0=0;MQRankSum=-2.693;QD=30.96;ReadPosRankSum=0.513;VQSLOD=4.1166;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.05:0,57,556	0/0:10,0:10:24.02:0,24,236	0/0:9,0:9:17.70:0,18,178	0/0:14,0:14:5.25:0,5,195	0/0:26,0:26:66.14:0,66,673	0/0:33,0:33:93.17:0,93,938	0/0:16,0:15:45.10:0,45,459	0/0:37,0:37:84.18:0,84,852	0/0:26,0:26:72.13:0,72,720	0/0:30,0:30:81.18:0,81,822	0/0:24,0:24:69.14:0,69,697	0/0:19,0:19:51.10:0,51,513	0/0:46,0:46:99:0,120,1215	0/0:27,0:27:63.11:0,63,634	0/0:27,0:27:69.14:0,69,697	0/0:20,0:20:60.14:0,60,612	0/0:18,0:18:48.10:0,48,489	0/0:21,0:21:54.12:0,54,550	1/1:3,17:20:54.17:676,54,0	1/1:1,20:21:57.14:699,57,0	0/0:10,0:9:27.06:0,27,275	0/0:32,0:32:87.18:0,87,881	0/0:38,0:38:99:0,105,1065	0/0:9,0:9:24.05:0,24,245	0/0:36,0:36:99:0,102,1041	0/0:23,0:23:66.15:0,66,673	1/1:2,36:39:99:1245,99,0	0/0:13,0:13:36.08:0,36,367
chr10	82033674	.	CA	C	1373.54	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.488;DP=630;FS=40.691;HRun=5;HaplotypeScore=58.5440;InbreedingCoeff=0.9981;MQ=71.92;MQ0=0;MQRankSum=0.365;QD=24.97;ReadPosRankSum=-0.093;VQSLOD=0.9493;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.25:0,90,1188	0/0:17,0:17:51.17:0,51,698	0/0:20,0:19:39.12:0,39,512	0/0:14,0:14:36.10:0,36,458	0/0:30,0:30:84.25:0,84,1114	0/0:22,0:22:66.22:0,66,902	1/1:1,11:12:27.08:306,27,0	0/0:23,0:23:66.19:0,66,846	0/0:24,0:24:69.23:0,69,943	0/0:29,0:29:81.27:0,81,1108	0/0:14,0:14:39.13:0,39,533	0/0:19,0:19:57.18:0,57,765	0/0:36,0:36:99:0,108,1476	0/0:28,0:28:84.25:0,84,1110	0/0:24,0:24:60.20:0,60,820	0/0:27,0:27:78.26:0,78,1067	0/0:21,0:20:54.18:0,54,739	0/0:18,0:18:54.16:0,54,721	0/0:26,0:26:75.23:0,75,993	0/0:21,0:21:57.18:0,57,763	0/0:17,0:16:45.15:0,45,616	0/0:28,0:28:75.25:0,75,1021	0/0:24,0:24:72.24:0,72,980	0/0:17,0:17:45.15:0,45,616	0/0:24,0:24:72.24:0,72,984	1/1:5,30:35:52.20:971,52,0	0/0:21,0:21:57.19:0,57,778	1/1:0,8:8:21.06:238,21,0
chr10	82033817	.	G	GT	2273.48	PASS	AB=0.851;AC=13;AF=0.232;AN=56;BaseQRankSum=-3.909;DP=706;FS=1.766;HRun=12;HaplotypeScore=77.3871;InbreedingCoeff=0.4664;MQ=73.47;MQ0=3;MQRankSum=0.328;QD=11.72;ReadPosRankSum=0.047;VQSLOD=3.4955;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:23:18.96:481,19,0	0/1:13,2:15:19.57:20,0,202	0/0:50,2:22:6.54:0,7,157	0/0:42,1:26:9.15:0,9,111	0/0:17,1:18:18.52:0,19,299	0/0:23,2:25:7.27:0,7,379	0/0:18,0:18:41.71:0,42,304	0/0:38,0:40:82.48:0,82,595	0/0:18,0:20:52.75:0,53,378	0/0:30,2:35:17.13:0,17,427	0/0:24,0:24:64.83:0,65,466	0/1:16,4:21:11.60:12,0,240	1/1:5,21:28:53.68:482,54,0	0/1:10,14:24:14.04:279,0,14	0/0:15,0:17:34.82:0,35,247	0/0:21,0:21:21.54:0,22,321	0/0:28,0:29:60.63:0,61,423	0/0:19,0:22:46.68:0,47,330	0/1:16,2:18:38.53:39,0,199	0/0:24,2:27:9.24:0,9,370	0/0:12,0:12:26.84:0,27,197	1/1:3,18:21:23.16:386,23,0	0/0:24,0:24:21.46:0,21,313	0/0:22,0:25:36.23:0,36,362	0/0:28,0:28:62.57:0,63,455	1/1:8,28:37:62.08:738,62,0	0/0:29,0:29:65.58:0,66,481	0/1:7,0:7:14.10:14,0,73
chr10	82034669	.	GC	G	1481.47	PASS	AB=0.521;AC=3;AF=0.054;AN=56;BaseQRankSum=7.290;DP=668;FS=13.073;HRun=1;HaplotypeScore=78.8929;InbreedingCoeff=0.6407;MQ=74.66;MQ0=0;MQRankSum=-1.058;QD=30.86;ReadPosRankSum=2.116;VQSLOD=2.1875;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1786	0/0:6,0:6:18.06:0,18,288	0/0:15,0:15:38.81:0,39,495	0/0:17,0:17:45.14:0,45,661	0/0:24,0:24:69.05:0,69,1101	0/0:21,0:21:63.21:0,63,1005	0/0:27,0:27:78.27:0,78,1239	0/0:30,0:30:90.31:0,90,1434	0/0:26,0:26:75.26:0,75,1194	0/0:24,0:24:72.25:0,72,1151	0/0:18,0:18:54.18:0,54,861	0/0:15,0:15:45.15:0,45,717	0/0:26,0:26:78.27:0,78,1242	0/0:31,0:31:93.32:0,93,1480	0/0:36,0:36:99:0,108,1722	0/0:20,0:20:60.20:0,60,955	0/0:35,0:35:99:0,105,1678	0/0:15,0:15:43.03:0,43,668	0/0:17,0:17:51.17:0,51,807	0/0:28,0:28:84.26:0,84,1294	0/0:45,0:45:99:0,135,2146	0/0:20,0:20:54.17:0,54,841	0/0:21,0:21:57.18:0,57,885	0/0:27,0:27:81.28:0,81,1288	0/0:21,0:21:60.20:0,60,956	0/1:3,34:37:32.57:1294,0,33	0/0:17,0:17:51.17:0,51,815	1/1:0,11:11:21.07:293,21,0
chr10	82035839	.	AAGCATCAGATC	A	5388.52	PASS	AB=0.526;AC=5;AF=0.089;AN=56;BaseQRankSum=11.506;DP=750;FS=6.156;HRun=0;HaplotypeScore=230.0474;InbreedingCoeff=0.6883;MQ=66.85;MQ0=6;MQRankSum=-10.705;QD=91.33;ReadPosRankSum=-0.234;VQSLOD=3.7930;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,7754	0/0:16,0:16:48.14:0,48,2608	0/0:21,0:17:48.16:0,48,2297	0/0:19,0:14:42.13:0,42,1920	0/0:29,0:29:87.30:0,87,4695	0/0:22,0:22:66.23:0,66,3717	1/1:0,28:28:63.22:2303,63,0	0/0:33,0:33:96.33:0,96,4733	0/0:31,0:31:93.31:0,93,4945	0/0:39,0:39:99:0,117,6363	0/0:26,0:25:75.26:0,75,4083	0/0:23,0:23:69.24:0,69,4081	0/0:37,0:37:99:0,111,6528	0/0:28,0:28:84.28:0,84,4568	0/0:24,0:24:72.25:0,72,4028	0/0:29,0:29:87.30:0,87,4901	0/0:22,0:22:66.21:0,66,3626	0/0:20,0:20:57.20:0,57,3214	0/0:19,0:19:54.19:0,54,2532	0/0:33,0:33:96.33:0,96,5487	0/0:25,0:25:75.25:0,75,3984	0/0:37,0:37:99:0,111,6090	0/0:26,0:26:75.26:0,75,4445	0/0:19,0:19:57.20:0,57,3345	0/0:32,0:32:96.31:0,96,5375	0/1:3,27:29:90.71:2973,0,91	0/0:36,0:36:99:0,108,5981	1/1:0,1:1:3.01:112,3,0
chr10	82036340	.	GA	G	1697.74	PASS	AB=0.950;AC=9;AF=0.161;AN=56;BaseQRankSum=10.967;DP=633;FS=9.774;HRun=9;HaplotypeScore=62.8572;InbreedingCoeff=0.8908;MQ=77.80;MQ0=0;MQRankSum=-4.370;QD=17.87;ReadPosRankSum=-0.440;VQSLOD=2.9076;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:69.04:632,69,0	0/0:10,0:11:32.93:0,33,360	0/1:17,1:19:0.28:0,0,279	0/0:15,0:15:4.66:0,5,259	0/0:39,0:39:99:0,108,1217	0/0:23,0:23:51.15:0,51,589	1/1:2,24:26:37.42:597,37,0	0/0:34,0:34:90.25:0,90,1022	0/0:23,0:23:63.19:0,63,727	0/0:32,0:33:84.07:0,84,938	0/0:22,1:23:32.70:0,33,620	0/0:29,0:29:78.20:0,78,886	0/0:23,0:23:63.18:0,63,717	0/0:25,0:25:60.17:0,60,682	0/0:18,0:18:48.13:0,48,546	0/0:22,0:22:57.17:0,57,658	0/0:16,0:16:48.14:0,48,554	0/0:11,0:11:30.09:0,30,346	0/0:19,0:19:51.13:0,51,577	0/0:31,0:31:87.26:0,87,1004	0/0:24,0:24:69.21:0,69,796	0/0:17,0:17:48.14:0,48,554	0/0:23,0:23:60.18:0,60,691	0/0:17,0:17:45.13:0,45,519	0/0:22,1:23:26.69:0,27,561	1/1:3,18:21:54.01:489,54,0	0/0:38,0:38:99:0,99,1142	1/1:0,5:5:15.01:137,15,0
chr10	82036441	.	AT	A	303	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.286;DP=554;FS=0.000;HRun=7;HaplotypeScore=53.1746;InbreedingCoeff=0.9592;MQ=81.92;MQ0=0;MQRankSum=-1.609;QD=18.94;ReadPosRankSum=0.239;VQSLOD=3.0273;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:33.05:0,33,396	0/0:6,0:6:18.06:0,18,226	0/0:21,0:22:61.97:0,62,636	0/0:13,0:13:25.94:0,26,249	0/0:29,0:29:81.24:0,81,1001	0/0:22,0:22:57.14:0,57,687	1/1:1,15:16:39.09:398,39,0	0/0:23,0:23:60.18:0,60,744	0/0:19,0:19:54.17:0,54,677	0/0:25,0:25:66.21:0,66,822	0/0:25,0:25:72.22:0,72,891	0/0:16,0:16:45.14:0,45,566	0/0:22,0:22:63.20:0,63,793	0/0:25,0:25:75.24:0,75,943	0/0:26,0:26:72.22:0,72,893	0/0:22,0:22:63.20:0,63,793	0/0:15,0:15:45.13:0,45,550	0/0:15,0:15:39.09:0,39,474	0/0:15,0:15:42.11:0,42,504	0/0:27,0:27:78.25:0,78,981	0/0:9,0:9:27.07:0,27,327	0/0:13,0:13:36.09:0,36,438	0/0:34,0:34:99:0,99,1245	0/0:9,0:9:27.09:0,27,340	0/0:33,0:33:96.28:0,96,1172	0/0:26,0:26:78.21:0,78,963	0/0:30,0:30:78.24:0,78,968	0/0:5,0:5:12.04:0,12,151
chr10	82037073	.	GGT	G	1790.66	PASS	AB=0.826;AC=33;AF=0.635;AN=52;BaseQRankSum=-1.413;DP=626;FS=6.352;HRun=0;HaplotypeScore=92.6876;InbreedingCoeff=0.2623;MQ=64.16;MQ0=15;MQRankSum=2.665;QD=4.47;ReadPosRankSum=0.134;VQSLOD=2.0715;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:52:18.96:0,19,160	1/1:4,0:4:2.92:17,3,0	./.	./.	1/1:10,3:12:2.81:32,3,0	0/1:20,0:20:43.08:130,0,43	1/1:27,1:27:8:95,8,0	0/0:34,0:34:2.56:0,3,17	1/1:11,0:11:15.02:148,15,0	1/1:15,3:18:11.77:102,12,0	0/1:4,2:11:10.07:67,0,10	1/1:8,3:12:15.95:128,16,0	0/0:21,0:21:23.11:0,23,317	0/1:21,0:21:18.10:18,0,168	1/1:14,6:20:11.86:111,12,0	0/1:19,5:27:20.34:259,0,20	0/1:27,3:29:99:212,0,102	1/1:18,0:18:4.82:78,5,0	1/1:18,0:19:5.68:28,6,0	1/1:6,0:10:2.84:14,3,0	1/1:38,0:37:15.01:146,15,0	0/0:16,0:16:15.02:0,15,164	0/1:10,6:16:21.49:53,0,21	1/1:15,17:32:15.04:162,15,0	0/1:23,9:32:72.52:79,0,73	0/0:20,0:20:36.43:0,36,289	1/1:9,0:17:17.47:85,17,0	0/0:19,0:21:23.26:0,23,198
chr10	82038099	.	C	CA	17530.35	PASS	AB=0.686;AC=52;AF=0.929;AN=56;BaseQRankSum=-5.433;DP=462;FS=8.824;HRun=1;HaplotypeScore=165.1012;InbreedingCoeff=0.4214;MQ=47.38;MQ0=0;MQRankSum=-0.383;QD=38.11;ReadPosRankSum=4.637;VQSLOD=3.2971;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,4:5:15.05:224,15,0	1/1:1,7:8:21.07:314,21,0	0/0:2,0:2:6:0,6,54	0/1:4,1:5:18.57:52,0,19	1/1:3,22:25:57.69:840,58,0	1/1:0,19:19:54.18:797,54,0	1/1:3,14:17:36.08:512,36,0	1/1:1,20:21:60.20:899,60,0	1/1:0,10:10:27.06:380,27,0	1/1:2,22:24:64.19:956,64,0	1/1:1,25:26:70.39:1074,70,0	1/1:0,20:20:60.17:874,60,0	1/1:0,11:11:33.11:494,33,0	1/1:2,16:18:48.98:672,49,0	1/1:2,21:23:64.10:945,64,0	1/1:0,14:14:39.06:536,39,0	1/1:1,9:10:24.05:335,24,0	0/1:1,6:7:1.48:165,0,1	1/1:1,12:13:36.07:495,36,0	1/1:4,32:36:92.07:1330,92,0	1/1:1,3:4:12.04:180,12,0	1/1:0,16:16:48.16:695,48,0	1/1:3,20:23:46.75:839,47,0	1/1:1,9:10:17.79:269,18,0	1/1:4,31:34:89.08:1345,89,0	1/1:1,21:22:64.76:928,65,0	1/1:5,24:27:61.98:1023,62,0	1/1:1,8:9:24.08:359,24,0
chr10	82038109	.	TG	T	12867.28	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=-1.683;DP=420;FS=3.930;HRun=3;HaplotypeScore=118.9033;InbreedingCoeff=0.6096;MQ=36.12;MQ0=0;MQRankSum=-1.732;QD=30.78;ReadPosRankSum=0.964;VQSLOD=4.0402;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:6:12.04:149,12,0	1/1:1,5:6:15.05:186,15,0	0/0:1,0:1:2.50:0,2,9	./.	1/1:3,20:23:42.08:516,42,0	1/1:1,17:18:48.15:590,48,0	1/1:1,14:15:30.08:359,30,0	1/1:8,9:17:36.09:423,36,0	1/1:1,8:9:21.07:260,21,0	1/1:0,22:22:66.21:814,66,0	1/1:1,23:24:63.20:774,63,0	1/1:0,18:18:51.16:631,51,0	1/1:0,9:9:24.07:290,24,0	1/1:2,15:17:42.13:518,42,0	1/1:1,19:20:57.17:693,57,0	1/1:0,12:12:36.11:443,36,0	1/1:1,8:9:21.07:260,21,0	1/1:1,6:7:15.05:186,15,0	1/1:1,8:9:24.08:297,24,0	1/1:5,33:38:84.26:1039,84,0	1/1:0,3:3:6:74,6,0	1/1:1,16:17:45.12:540,45,0	1/1:0,17:17:42.13:516,42,0	1/1:0,9:9:14.99:185,15,0	1/1:3,31:34:90.25:1097,90,0	1/1:2,18:20:57.16:693,57,0	1/1:0,31:30:87.27:1074,87,0	1/1:0,8:8:21.07:260,21,0
chr10	82038745	.	TA	T	1173.53	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.277;DP=589;FS=19.529;HRun=9;HaplotypeScore=56.8594;InbreedingCoeff=0.9522;MQ=68.08;MQ0=0;MQRankSum=0.105;QD=20.96;ReadPosRankSum=1.375;VQSLOD=2.3755;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:26:62.50:0,62,318	0/0:11,0:11:27.08:0,27,312	0/0:7,0:6:8.92:0,9,73	0/0:9,0:9:17:0,17,182	0/0:35,0:35:96.27:0,96,1098	0/0:20,0:20:54.16:0,54,623	1/1:2,17:19:39.02:357,39,0	0/0:37,0:37:96.26:0,96,1084	0/0:14,0:14:36.11:0,36,415	0/0:30,0:30:84.25:0,84,967	0/0:32,0:32:93.23:0,93,1059	0/0:21,0:21:57.17:0,57,658	0/0:18,0:18:45.13:0,45,519	0/0:20,0:20:48.14:0,48,554	0/0:21,0:21:60.18:0,60,692	0/0:25,0:25:66.20:0,66,762	0/0:23,0:23:57.17:0,57,658	0/0:14,0:14:36.11:0,36,415	0/0:16,0:16:42.12:0,42,478	0/0:33,2:35:68.81:0,69,1038	0/0:9,0:9:27.08:0,27,312	0/0:24,0:24:69.21:0,69,796	0/0:23,0:23:57.12:0,57,642	0/0:7,0:7:21.06:0,21,242	0/0:29,0:29:84.24:0,84,960	1/1:1,33:34:67.44:871,67,0	0/0:27,0:27:72.21:0,72,830	1/1:0,3:3:9:82,9,0
chr10	82039296	.	C	CACAT	17986.36	PASS	AB=0.654;AC=36;AF=0.692;AN=52;BaseQRankSum=-8.855;DP=820;FS=0.000;HRun=0;HaplotypeScore=135.5783;InbreedingCoeff=-0.0920;MQ=64.34;MQ0=10;MQRankSum=2.405;QD=25.37;ReadPosRankSum=3.974;VQSLOD=4.7470;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,7:24:6.58:344,7,0	0/1:7,5:13:28.85:337,0,29	./.	./.	0/1:13,14:27:51.69:809,0,52	1/1:14,12:28:24.08:568,24,0	0/0:28,0:28:39.04:0,39,494	0/0:49,0:48:40.10:0,40,500	0/1:15,21:39:4.78:869,0,5	1/1:12,24:36:72.20:1603,72,0	1/1:11,15:26:32.74:769,33,0	0/1:15,16:32:48.70:877,0,49	0/1:14,18:32:10.80:739,0,11	0/1:19,13:33:19.83:539,0,20	1/1:26,19:47:33.11:780,33,0	1/1:12,26:38:25.32:1585,25,0	1/1:10,10:21:24:516,24,0	0/1:11,10:21:2.86:405,0,3	1/1:11,5:16:18.06:374,18,0	0/1:16,18:36:57.50:674,0,58	0/1:12,16:29:19.58:541,0,20	0/1:16,24:41:54.57:1214,0,55	0/1:14,14:29:63.75:534,0,64	1/1:14,13:28:6.15:615,6,0	1/1:16,16:33:4.25:1088,4,0	1/1:32,0:32:57.14:1018,57,0	0/1:19,20:39:16.68:1080,0,17	1/1:8,0:8:6.02:111,6,0
chr10	82039332	.	T	TACATACAC	6026.57	PASS	AB=0.979;AC=25;AF=0.446;AN=56;BaseQRankSum=14.463;DP=810;FS=7.127;HRun=0;HaplotypeScore=225.2415;InbreedingCoeff=-0.6669;MQ=61.50;MQ0=10;MQRankSum=0.822;QD=8.56;ReadPosRankSum=11.263;VQSLOD=0.7454;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:42.82:43,0,211	0/1:11,0:11:60.47:60,0,133	0/0:22,0:14:35.13:0,35,364	0/0:14,0:8:10.38:0,10,182	0/1:19,0:19:99:170,0,181	0/1:27,0:27:81.33:81,0,258	0/0:21,0:21:51.48:0,51,894	0/0:49,0:48:99:0,126,1444	0/1:37,0:37:99:165,0,252	0/1:37,0:37:99:415,0,220	0/1:26,0:26:99:143,0,131	0/1:31,0:31:99:176,0,300	0/1:31,0:31:99:127,0,263	0/1:30,0:30:83.41:83,0,299	0/1:33,0:33:99:146,0,142	0/1:38,0:38:99:324,0,190	0/1:21,0:21:78.38:131,0,78	0/1:20,0:20:91.39:91,0,125	0/1:24,0:22:99:106,0,342	0/1:38,0:38:99:103,0,409	0/1:32,0:32:81.37:81,0,311	0/1:38,0:38:99:257,0,300	0/1:33,0:33:66.25:66,0,462	0/1:36,0:35:90.33:90,0,290	0/1:32,0:32:99:203,0,286	1/1:0,30:34:89.90:2500,90,0	0/1:43,0:43:99:207,0,341	0/1:1,10:11:35.94:255,0,36
chr10	82039334	.	C	CAT	3752.86	PASS	AB=0.994;AC=25;AF=0.446;AN=56;BaseQRankSum=18.927;DP=792;FS=4.261;HRun=0;HaplotypeScore=142.1815;InbreedingCoeff=-0.6784;MQ=61.84;MQ0=10;MQRankSum=-0.720;QD=5.45;ReadPosRankSum=9.839;VQSLOD=1.8153;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:77.77:78,0,351	0/1:11,0:11:62.37:62,0,207	0/0:22,0:15:45.15:0,45,645	0/0:13,0:8:24.04:0,24,303	0/1:20,0:20:99:174,0,199	0/1:27,0:27:89.21:89,0,520	0/0:20,0:20:54.08:0,54,691	0/0:49,0:48:99:0,135,1900	0/1:37,0:37:99:165,0,423	0/1:36,0:36:99:358,0,433	0/1:26,0:26:99:142,0,296	0/1:30,1:31:99:187,0,399	0/1:30,0:30:99:135,0,449	0/1:27,0:27:85.19:85,0,540	0/1:31,0:31:99:150,0,323	0/1:37,0:37:99:339,0,333	0/1:21,1:22:99:126,0,209	0/1:21,0:21:77.27:77,0,269	0/1:24,0:22:17.91:18,0,642	0/1:37,0:37:99:109,0,664	0/1:32,0:32:89.24:89,0,524	0/1:37,0:37:99:257,0,390	0/1:32,0:32:74.21:74,0,693	0/1:33,0:32:93.28:93,0,624	0/1:33,1:34:99:230,0,570	0/1:33,0:33:99:449,0,259	0/1:38,1:39:99:208,0,614	1/1:9,0:9:6.01:57,6,0
chr10	82040425	.	G	GCC	2767.72	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-5.254;DP=495;FS=11.860;HRun=2;HaplotypeScore=71.7015;InbreedingCoeff=0.9683;MQ=86.87;MQ0=0;MQRankSum=-1.426;QD=49.42;ReadPosRankSum=0.787;VQSLOD=2.1590;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:45.15:0,45,664	0/0:4,0:4:12.04:0,12,177	0/0:15,0:15:39.13:0,39,556	0/0:23,0:23:66.11:0,66,891	0/0:19,0:19:57.19:0,57,839	0/0:16,0:16:48.15:0,48,677	1/1:1,16:17:48.16:862,48,0	0/0:23,0:23:66.22:0,66,972	0/0:15,0:15:45.15:0,45,655	0/0:20,0:20:60.20:0,60,883	0/0:20,0:20:60.20:0,60,883	0/0:15,0:15:42.14:0,42,617	0/0:29,0:29:87.29:0,87,1280	0/0:26,0:26:75.23:0,75,1069	0/0:20,0:20:57.19:0,57,838	0/0:25,0:25:72.24:0,72,1052	0/0:19,0:18:57.19:0,57,839	0/0:5,0:5:9.03:0,9,133	0/0:11,0:11:33.11:0,33,486	0/0:23,0:23:51.17:0,51,751	0/0:28,0:28:78.25:0,78,1122	0/0:9,0:9:27.07:0,27,353	0/0:12,0:12:33.11:0,33,485	0/0:23,0:23:60.17:0,60,842	0/0:10,0:10:30.10:0,30,433	1/1:1,18:20:54.17:980,54,0	0/0:14,0:14:42.12:0,42,598	1/1:0,19:19:57.20:1068,57,0
chr10	82040465	.	C	CAT	763.23	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=2.695;DP=448;FS=16.761;HRun=0;HaplotypeScore=171.4187;InbreedingCoeff=0.5290;MQ=60.08;MQ0=7;MQRankSum=-1.416;QD=11.22;ReadPosRankSum=-3.476;VQSLOD=1.5256;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:15:10.82:0,11,216	0/0:5,0:5:12.93:0,13,113	0/0:16,0:11:19.24:0,19,345	0/0:22,0:15:40.78:0,41,543	0/0:20,0:20:36.12:0,36,537	0/0:15,0:15:3.48:0,3,168	0/0:17,0:16:27.86:0,28,406	0/0:27,0:26:63.77:0,64,821	0/0:13,0:13:20.86:0,21,279	0/0:24,0:23:48.09:0,48,602	0/0:20,0:20:27.09:0,27,390	0/1:12,0:12:1.87:2,0,58	0/0:21,0:20:36.24:0,36,463	0/0:20,0:20:23.29:0,23,286	0/0:19,0:19:3.25:0,3,140	0/0:19,0:18:29.12:0,29,398	0/0:10,0:9:30.10:0,30,438	0/0:4,0:3:0.94:0,1,2	0/1:16,0:15:32.95:268,0,33	1/1:10,14:24:16.99:195,17,0	0/0:16,0:14:30.10:0,30,454	0/0:10,0:10:8.38:0,8,134	0/0:8,0:8:9.21:0,9,136	0/0:12,0:12:24.08:0,24,344	0/0:7,0:7:13.81:0,14,186	0/0:23,0:23:56.03:0,56,720	1/1:16,0:16:17.48:424,17,0	0/0:15,0:14:41.57:0,42,547
chr10	82040499	.	CT	C	588.67	PASS	AB=0.825;AC=20;AF=0.476;AN=42;BaseQRankSum=4.137;DP=192;FS=11.200;HRun=1;HaplotypeScore=43.8523;InbreedingCoeff=-0.3010;MQ=30.56;MQ0=1;MQRankSum=-1.334;QD=4.00;ReadPosRankSum=3.162;VQSLOD=-0.6502;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,1:10:26.90:27,0,40	0/1:3,1:4:22.87:23,0,54	./.	./.	./.	0/1:9,1:10:7.61:8,0,48	0/1:8,1:8:8.21:12,0,8	0/1:10,3:12:48.99:49,0,354	0/1:5,1:6:38.86:39,0,76	0/1:13,2:14:17.94:18,0,276	./.	1/1:8,2:10:6.70:68,7,0	0/1:6,4:9:45.24:74,0,45	1/1:13,0:13:7.87:56,8,0	1/1:6,1:7:8.91:67,9,0	0/1:5,4:8:11.65:115,0,12	0/0:2,0:2:3:0,3,25	./.	0/1:5,1:5:19.27:19,0,111	0/0:9,2:11:1.72:0,2,4	./.	1/1:4,2:6:4.76:16,5,0	./.	0/0:6,0:6:3.90:0,4,40	0/0:2,0:2:0.47:0,0,1	0/1:8,3:11:72.91:73,0,197	0/1:5,2:7:55.90:56,0,84	0/0:4,0:3:9.02:0,9,115
chr10	82041062	.	G	GC	388.70	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=9.132;DP=520;FS=8.132;HRun=1;HaplotypeScore=77.6080;InbreedingCoeff=0.2174;MQ=70.57;MQ0=0;MQRankSum=1.792;QD=4.14;ReadPosRankSum=3.254;VQSLOD=0.3211;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,8:15:35.95:374,36,0	0/0:12,0:12:25.57:0,26,303	0/0:16,0:13:20.08:0,20,235	0/0:17,0:15:3.17:0,3,130	0/0:28,0:28:62.50:0,62,765	0/0:28,0:28:62.12:0,62,794	0/0:7,0:7:17.80:0,18,126	0/0:27,0:26:72.11:0,72,799	0/0:22,0:22:60.12:0,60,718	0/0:20,0:20:7.62:0,8,239	0/0:24,0:24:58.53:0,59,622	0/0:19,0:19:48.15:0,48,598	0/0:16,0:16:30.08:0,30,126	0/0:15,0:15:31.22:0,31,169	0/0:20,0:20:49.21:0,49,654	0/0:19,0:19:37.44:0,37,525	0/0:20,0:20:50.51:0,51,672	0/0:13,0:13:26.27:0,26,305	0/0:18,0:18:12.49:0,12,187	0/1:31,0:31:50.61:51,0,91	0/0:11,0:11:26.44:0,26,373	0/0:12,0:12:15.50:0,15,102	0/0:15,0:15:32.43:0,32,426	0/0:13,0:13:39.04:0,39,450	0/0:33,0:33:77.18:0,77,937	0/1:13,0:13:16.48:44,0,16	0/1:23,0:23:29.71:30,0,118	0/1:12,0:12:20.98:21,0,34
chr10	82041063	.	C	CA	2478.98	PASS	AB=0.821;AC=24;AF=0.429;AN=56;BaseQRankSum=1.162;DP=541;FS=0.404;HRun=11;HaplotypeScore=77.0297;InbreedingCoeff=0.5000;MQ=69.79;MQ0=0;MQRankSum=-1.992;QD=9.68;ReadPosRankSum=-0.370;VQSLOD=2.7041;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:16:28.74:151,29,0	0/1:9,1:13:8.45:8,0,106	0/1:16,0:13:10.65:11,0,55	0/0:16,1:15:6.15:0,6,89	0/0:27,1:29:28.22:0,28,383	0/0:28,0:29:12.54:0,13,379	1/1:9,0:9:5.77:31,6,0	0/0:26,0:26:49.75:0,50,373	0/0:20,0:22:57.82:0,58,426	0/1:9,12:21:27.57:276,0,28	0/0:25,0:26:16.45:0,16,243	0/0:19,0:19:47.32:0,47,347	1/1:2,0:16:34.17:175,34,0	1/1:5,0:17:23.97:117,24,0	0/0:19,2:21:17.38:0,17,315	0/1:15,2:18:19.44:19,0,219	0/0:19,1:20:23.31:0,23,361	0/1:12,1:13:9.60:10,0,118	1/1:10,8:19:12.63:279,13,0	1/1:5,26:32:56.91:551,57,0	0/0:10,1:11:1.65:0,2,182	1/1:9,1:13:26.38:180,26,0	0/0:15,3:18:2.40:0,2,201	0/0:13,0:13:29.88:0,30,232	0/0:32,0:33:42.69:0,43,479	1/1:3,12:15:15.83:335,16,0	0/1:7,16:24:7.52:278,0,8	1/1:3,9:13:26.89:258,27,0
chr10	82041074	.	A	AAC	791.47	PASS	AB=0.966;AC=10;AF=0.179;AN=56;BaseQRankSum=6.274;DP=529;FS=22.101;HRun=0;HaplotypeScore=82.0762;InbreedingCoeff=0.2686;MQ=73.06;MQ0=0;MQRankSum=-1.363;QD=5.61;ReadPosRankSum=-2.675;VQSLOD=0.7645;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,12:17:29.86:386,30,0	0/0:12,0:12:31.78:0,32,316	0/0:19,0:15:16.98:0,17,204	0/1:18,0:19:47.70:48,0,231	0/0:26,0:26:59.93:0,60,695	0/0:33,0:33:34.11:0,34,813	0/0:5,0:5:14.85:0,15,107	0/0:28,0:28:29.23:0,29,712	0/0:24,0:24:68.89:0,69,801	0/1:17,0:17:3.98:4,0,191	0/0:17,0:21:32.86:0,33,489	0/0:22,0:22:58.34:0,58,634	0/1:17,0:17:5.42:204,0,5	1/1:15,0:15:8.78:164,9,0	0/0:21,0:21:52.64:0,53,643	0/0:16,0:16:41.34:0,41,464	0/0:22,0:22:55.01:0,55,699	0/0:9,0:9:22.85:0,23,272	0/1:11,0:12:22.88:23,0,62	0/1:28,0:28:37.61:38,0,69	0/0:12,0:12:34.01:0,34,375	0/1:14,0:14:74.76:75,0,80	0/0:22,0:22:10.42:0,10,407	0/0:13,0:13:36.07:0,36,451	0/0:30,0:31:65.81:0,66,945	0/0:18,0:19:14.71:0,15,124	0/0:22,0:22:14.95:0,15,153	0/0:11,0:11:2.01:0,2,47
chr10	82042527	.	G	GTCTGTTCTGT	963.48	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.376;DP=763;FS=2.514;HRun=0;HaplotypeScore=228.8949;InbreedingCoeff=0.9963;MQ=78.13;MQ0=0;MQRankSum=-3.109;QD=53.53;ReadPosRankSum=-3.818;VQSLOD=2.7120;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:78.25:0,78,2246	0/0:15,0:15:39.11:0,39,1094	0/0:33,0:30:55.58:0,56,1188	0/0:36,0:34:33.77:0,34,945	0/0:28,0:28:69.24:0,69,2057	0/0:25,0:25:57.15:0,57,1543	1/1:9,9:18:27.05:1058,27,0	0/0:46,0:46:81.25:0,81,1874	0/0:19,0:19:54.19:0,54,1653	0/0:45,0:45:99:0,114,3124	0/0:20,0:20:45.14:0,45,1232	0/0:29,0:29:72.12:0,72,1749	0/0:23,0:23:60.19:0,60,1684	0/0:34,0:34:81.26:0,81,2369	0/0:22,0:22:45.14:0,45,1269	0/0:24,0:24:54.19:0,54,1648	0/0:15,0:15:24.07:0,24,665	0/0:24,0:24:60.09:0,60,1553	0/0:24,0:24:51.12:0,51,1242	0/0:27,0:27:60.18:0,60,1645	0/0:28,0:28:66.17:0,66,1812	0/0:33,0:33:72.22:0,72,1979	0/0:32,0:32:63.20:0,63,1781	0/0:25,0:25:57.18:0,57,1678	0/0:20,0:20:42.12:0,42,1130	0/0:30,0:30:63.20:0,63,1742	0/0:41,0:41:93.29:0,93,2653	0/0:15,0:15:33.10:0,33,938
chr10	82042564	.	TATGTGTGTGC	T	2403.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.179;DP=796;FS=20.809;HRun=0;HaplotypeScore=231.0303;InbreedingCoeff=0.9999;MQ=70.23;MQ0=2;MQRankSum=-0.346;QD=68.68;ReadPosRankSum=-4.669;VQSLOD=1.6124;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,4845	0/0:18,0:18:54.19:0,54,2677	0/0:40,0:32:96.11:0,96,3596	0/0:44,0:42:99:0,117,4825	0/0:31,0:31:90.29:0,90,4010	0/0:26,0:26:78.23:0,78,2942	0/0:19,0:19:42.14:0,42,2035	1/1:1,34:35:99:2499,105,0	0/0:23,0:23:69.24:0,69,3572	0/0:46,0:46:99:0,138,7027	0/0:23,0:23:69.24:0,69,3372	0/0:26,0:26:78.25:0,78,3767	0/0:34,0:34:99:0,102,5060	0/0:37,0:37:99:0,111,5457	0/0:26,0:26:78.27:0,78,3904	0/0:27,0:27:81.28:0,81,4058	0/0:14,0:14:42.14:0,42,2070	0/0:20,0:20:54.19:0,54,2878	0/0:23,0:23:69.23:0,69,3108	0/0:23,0:23:69.24:0,69,3669	0/0:28,0:28:84.29:0,84,4222	0/0:25,0:25:75.26:0,75,3481	0/0:28,0:28:84.29:0,84,3638	0/0:28,0:28:78.27:0,78,4014	0/0:24,0:24:69.23:0,69,3219	0/0:36,0:36:99:0,108,5371	0/0:37,0:37:99:0,111,5465	0/0:14,0:14:42.14:0,42,2247
chr10	82042825	.	G	GC	1187.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.600;DP=759;FS=11.090;HRun=0;HaplotypeScore=71.1648;InbreedingCoeff=0.9959;MQ=81.68;MQ0=0;MQRankSum=-1.594;QD=40.95;ReadPosRankSum=-1.648;VQSLOD=2.7905;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1508	0/0:8,0:8:24.05:0,24,315	0/0:20,0:20:54.58:0,55,753	0/0:25,0:25:69.03:0,69,892	0/0:27,0:27:72.24:0,72,1003	0/0:21,0:21:63.20:0,63,866	1/1:0,29:29:81.28:1282,81,0	0/0:53,0:53:99:0,156,2116	0/0:25,0:25:75.23:0,75,1030	0/0:35,0:35:99:0,105,1408	0/0:20,0:20:60.18:0,60,819	0/0:26,0:26:75.24:0,75,1031	0/0:29,0:29:78.22:0,78,1034	0/0:28,0:28:84.26:0,84,1142	0/0:37,0:37:99:0,108,1474	0/0:28,0:28:84.25:0,84,1150	0/0:27,0:27:81.25:0,81,1114	0/0:15,0:15:45.07:0,45,587	0/0:16,0:16:48.14:0,48,640	0/0:29,0:29:84.28:0,84,1173	0/0:45,0:45:99:0,132,1792	0/0:22,0:22:57.19:0,57,792	0/0:28,0:28:81.27:0,81,1129	0/0:20,0:20:60.20:0,60,839	0/0:25,0:25:72.24:0,72,1007	0/0:40,0:40:99:0,102,1411	0/0:36,0:36:99:0,108,1424	0/0:8,0:8:24.08:0,24,335
chr10	82043004	.	G	GGATGGATG	84.42	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.204;DP=665;FS=0.000;HRun=0;HaplotypeScore=162.0943;InbreedingCoeff=0.7233;MQ=68.04;MQ0=0;MQRankSum=-0.560;QD=6.03;ReadPosRankSum=-2.695;VQSLOD=1.4686;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:57.15:0,57,1241	0/0:11,0:11:30.09:0,30,729	0/0:24,0:21:32.02:0,32,533	0/0:17,0:14:18.06:0,18,372	0/0:30,0:30:72.20:0,72,1657	0/0:25,0:25:63.22:0,63,1584	1/1:8,5:14:1.53:160,2,0	0/0:33,0:33:66.22:0,66,1579	0/0:20,0:20:47.63:0,48,1048	0/0:33,0:33:87.29:0,87,2181	0/0:25,0:25:54.17:0,54,1316	0/0:19,0:19:51.16:0,51,1129	0/0:23,0:23:45.15:0,45,1122	0/0:37,0:37:96.32:0,96,2409	0/0:31,0:31:75.24:0,75,1776	0/0:24,0:24:60.21:0,60,1563	0/0:26,0:26:69.22:0,69,1702	0/0:14,0:14:33.11:0,33,699	0/0:20,0:20:45.13:0,45,889	0/0:33,0:33:81.25:0,81,1915	0/0:12,0:12:33.08:0,33,709	0/0:19,0:19:53.85:0,54,1287	0/0:34,0:34:87.27:0,87,2090	0/0:17,0:17:33.07:0,33,793	0/0:31,0:31:84.29:0,84,2021	0/0:25,0:25:66.20:0,66,1448	0/0:27,0:27:69.22:0,69,1697	0/0:15,0:15:45.15:0,45,1128
chr10	82044460	.	G	GA	234.88	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-2.254;DP=612;FS=6.660;HRun=10;HaplotypeScore=68.9576;InbreedingCoeff=0.6444;MQ=70.05;MQ0=2;MQRankSum=-1.341;QD=7.83;ReadPosRankSum=-1.679;VQSLOD=1.6163;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:39:99:0,104,837	0/0:8,0:8:17.97:0,18,148	0/0:26,1:22:27.83:0,28,218	0/1:15,0:13:20.50:21,0,46	0/0:26,0:29:72:0,72,559	0/0:16,0:16:44.93:0,45,367	1/1:0,13:13:30.08:320,30,0	0/0:32,0:32:71.88:0,72,586	0/0:18,0:18:47.91:0,48,388	0/0:24,0:24:59.82:0,60,476	0/0:19,0:20:49.96:0,50,400	0/0:19,0:19:44.94:0,45,369	0/0:20,0:20:53.93:0,54,443	0/0:21,0:22:64.95:0,65,520	0/0:21,0:21:46.14:0,46,372	0/0:17,0:18:40.98:0,41,326	0/0:25,0:25:56.92:0,57,468	0/0:31,2:34:53.89:0,54,631	0/0:25,0:25:47.89:0,48,392	0/0:23,0:23:51.09:0,51,481	0/0:14,0:15:34.99:0,35,277	0/0:17,0:18:52.98:0,53,425	0/0:23,0:23:53.87:0,54,438	0/0:15,0:15:29.96:0,30,246	0/0:25,0:25:50.38:0,50,539	0/0:27,0:27:68.91:0,69,566	0/0:24,0:24:58.93:0,59,474	0/0:12,0:12:26.94:0,27,222
chr10	82045191	.	GT	G	457.77	PASS	AB=0.807;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.336;DP=222;FS=5.919;HRun=12;HaplotypeScore=32.1729;InbreedingCoeff=0.2798;MQ=90.02;MQ0=2;MQRankSum=0.539;QD=7.50;ReadPosRankSum=-1.554;VQSLOD=0.6688;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:9:23.92:0,24,125	0/0:4,0:4:9:0,9,85	0/1:10,0:9:5.63:6,0,44	0/0:25,0:18:13.03:0,13,89	0/0:5,0:5:12.02:0,12,122	0/0:10,1:11:0.92:0,1,190	0/0:4,0:4:6.01:0,6,61	1/1:9,18:27:50.75:395,51,0	0/1:6,1:7:8.25:8,0,93	0/0:3,0:3:9.02:0,9,91	0/0:2,0:2:6.01:0,6,61	0/0:5,0:5:9.02:0,9,91	0/0:3,0:3:3.01:0,3,30	0/0:2,0:2:6.01:0,6,61	0/0:5,0:5:9.01:0,9,86	0/0:4,0:4:5.99:0,6,53	0/0:20,0:21:30.21:0,30,436	0/0:14,0:14:23.97:0,24,217	0/0:12,0:12:20.96:0,21,200	0/0:3,0:3:8.98:0,9,80	0/0:3,0:3:6.01:0,6,61	0/0:1,0:1:3.01:0,3,30	0/0:4,0:4:9.02:0,9,91	0/0:3,0:3:6.01:0,6,61	0/0:7,0:7:11.97:0,12,104	1/1:3,8:11:17.88:139,18,0	0/0:11,0:10:21.92:0,22,210	0/1:1,4:6:19.44:41,0,19
chr10	82045212	.	A	AAT	1098.69	PASS	AB=0.788;AC=15;AF=0.577;AN=26;BaseQRankSum=-3.094;DP=181;FS=6.047;HRun=0;HaplotypeScore=33.4019;InbreedingCoeff=0.2008;MQ=81.78;MQ0=4;MQRankSum=-1.063;QD=12.07;ReadPosRankSum=-1.194;VQSLOD=2.1438;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:8:5.68:0,6,28	./.	./.	0/0:24,0:14:2.54:0,3,13	./.	0/1:7,1:8:32.22:59,0,32	./.	1/1:31,5:35:19.55:490,20,0	./.	./.	./.	1/1:1,2:4:6.02:93,6,0	./.	./.	./.	1/1:1,1:2:3.01:46,3,0	0/1:11,4:16:16.61:195,0,17	0/1:6,4:10:82.94:166,0,83	1/1:7,0:7:3.48:42,3,0	./.	./.	./.	./.	./.	1/1:1,1:3:6.02:93,6,0	0/0:7,0:7:6.02:0,6,69	1/1:4,0:5:3:26,3,0	0/0:13,0:13:23.62:0,24,222
chr10	82046428	.	GA	G	2087.11	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.579;DP=776;FS=1.740;HRun=1;HaplotypeScore=77.0367;InbreedingCoeff=0.9998;MQ=72.30;MQ0=1;MQRankSum=-0.162;QD=37.95;ReadPosRankSum=2.174;VQSLOD=4.3154;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,55:55:99:2182,157,0	0/0:12,0:12:36.12:0,36,571	0/0:29,0:27:74.76:0,75,1183	0/0:33,0:32:76.36:0,76,1305	0/0:30,0:30:90.29:0,90,1407	0/0:27,0:27:81.28:0,81,1295	0/0:22,0:22:66.21:0,66,1032	0/0:27,0:27:81.26:0,81,1255	0/0:18,0:18:54.18:0,54,863	0/0:29,0:29:84.28:0,84,1324	0/0:23,0:23:69.24:0,69,1103	0/0:31,0:31:93.32:0,93,1484	0/0:35,0:35:99:0,105,1677	0/0:24,0:24:69.24:0,69,1099	0/0:42,0:41:99:0,126,2009	0/0:42,0:42:99:0,123,1965	0/0:31,0:31:90.28:0,90,1409	0/0:17,0:17:51.17:0,51,815	0/0:17,0:17:51.17:0,51,816	0/0:25,0:25:75.23:0,75,1153	0/0:38,0:38:99:0,114,1823	0/0:25,0:25:75.26:0,75,1196	0/0:19,0:19:57.18:0,57,886	0/0:34,0:34:99:0,102,1572	0/0:25,0:25:75.26:0,75,1199	0/0:26,0:26:78.27:0,78,1248	0/0:25,0:24:75.24:0,75,1161	0/0:15,0:15:45.09:0,45,625
chr10	82047120	.	GT	G	2767.71	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.581;DP=578;FS=0.780;HRun=10;HaplotypeScore=68.6809;InbreedingCoeff=0.9658;MQ=78.33;MQ0=0;MQRankSum=-2.435;QD=19.09;ReadPosRankSum=1.468;VQSLOD=4.5630;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:32:61.46:0,61,871	0/0:13,0:13:39.09:0,39,423	0/0:20,1:21:20.55:0,21,240	0/0:16,1:16:3.22:0,3,225	0/0:33,0:33:81.20:0,81,882	0/0:27,1:28:49.15:0,49,769	1/1:4,18:22:47.98:416,48,0	0/0:36,0:36:90.23:0,90,980	0/0:19,1:20:25.19:0,25,505	0/0:30,0:30:84.21:0,84,911	0/0:24,0:24:72.19:0,72,795	0/0:15,0:15:42.11:0,42,465	1/1:4,14:19:44.02:370,44,0	1/1:1,18:20:53.03:448,53,0	0/0:21,0:21:57.14:0,57,623	0/0:8,0:8:24.05:0,24,258	0/0:15,0:15:39.11:0,39,431	0/0:19,0:19:54.15:0,54,597	1/1:3,15:18:47.03:396,47,0	1/1:3,21:24:59.96:521,60,0	0/0:16,1:17:16.04:0,16,396	1/1:3,12:15:32.98:286,33,0	0/0:19,0:19:45.11:0,45,490	0/0:8,0:10:29.65:0,30,292	0/0:23,0:23:60.14:0,60,647	0/0:20,0:20:48.11:0,48,517	1/1:3,23:27:62.01:527,62,0	0/0:12,0:12:36.09:0,36,390
chr10	82047559	.	AGT	A	807.57	PASS	AB=0.925;AC=14;AF=0.259;AN=54;BaseQRankSum=9.687;DP=1019;FS=1.943;HRun=0;HaplotypeScore=194.0528;InbreedingCoeff=0.2317;MQ=54.76;MQ0=16;MQRankSum=-5.081;QD=1.87;ReadPosRankSum=1.569;VQSLOD=2.3765;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:34:12:0,12,104	0/0:13,0:13:26.99:0,27,383	./.	0/0:52,0:24:9.49:0,9,112	0/1:18,1:19:0.71:1,0,356	0/1:22,2:26:43.08:43,0,512	0/0:42,0:42:22.02:0,22,185	0/0:45,1:43:26.21:0,26,416	0/0:36,0:37:27.51:0,28,720	0/0:50,2:52:22.99:0,23,1081	0/1:13,2:15:43.48:43,0,227	0/1:35,4:39:66.45:66,0,692	1/1:47,0:49:43.18:277,43,0	1/1:45,0:45:55.57:260,56,0	0/1:48,4:52:38.87:39,0,1086	0/0:35,2:37:19.66:0,20,1030	0/0:35,1:36:27.77:0,28,808	0/1:25,2:27:20.12:20,0,637	0/0:19,0:19:23.99:0,24,221	0/0:9,0:24:14.17:0,14,96	0/1:99,6:105:99:157,0,1486	1/1:30,0:30:12.63:49,13,0	0/0:26,4:29:14.02:0,14,574	0/0:45,1:46:19:0,19,1036	0/1:22,2:24:18.93:19,0,560	0/0:17,0:33:29.36:0,29,252	0/0:7,0:22:14.64:0,15,113	0/0:12,0:17:32.90:0,33,268
chr10	82047584	.	GTGTGTGTGTA	G	2165.90	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=10.908;DP=939;FS=9.771;HRun=0;HaplotypeScore=302.9399;InbreedingCoeff=0.7791;MQ=56.64;MQ0=17;MQRankSum=-11.194;QD=17.47;ReadPosRankSum=3.076;VQSLOD=1.1320;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:29.95:0,30,655	0/0:16,0:16:44.97:0,45,1545	0/0:32,0:13:26.09:0,26,360	0/0:46,0:28:74.45:0,74,1214	0/0:15,0:15:36.11:0,36,1483	0/0:22,0:22:61.60:0,62,2417	0/0:38,0:37:60.08:0,60,1337	0/0:45,0:42:99:0,105,2626	0/0:30,0:30:68.94:0,69,2856	0/0:50,0:50:99:0,139,4890	0/0:10,0:10:27.08:0,27,1063	0/0:32,0:32:84.23:0,84,3324	1/1:53,1:54:57.72:1126,58,0	1/1:41,3:45:69.03:1002,69,0	0/0:48,0:48:99:0,129,4908	0/0:40,0:40:99:0,117,4107	0/0:38,0:38:99:0,99,3667	0/0:23,0:23:69.07:0,69,2747	0/0:18,0:16:44.99:0,45,1047	0/0:22,0:22:27.99:0,28,511	0/0:89,0:89:99:0,205,7260	0/1:25,0:25:62.76:167,0,63	0/0:25,0:24:57.15:0,57,2206	0/0:48,0:48:99:0,123,4394	0/0:24,0:24:66.18:0,66,2507	0/0:27,0:27:63.96:0,64,1417	0/0:28,0:28:44.87:0,45,704	0/0:16,0:15:42.08:0,42,1267
chr10	82047586	.	GTGTGTGTA	G	4347.65	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.151;DP=925;FS=7.732;HRun=0;HaplotypeScore=261.6038;InbreedingCoeff=0.9012;MQ=58.64;MQ0=13;MQRankSum=-11.021;QD=35.06;ReadPosRankSum=3.186;VQSLOD=3.1343;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:32.95:0,33,600	0/0:16,0:16:44.88:0,45,1253	0/0:28,0:13:30.07:0,30,340	0/0:45,0:30:80.20:0,80,1053	0/0:15,0:15:39.10:0,39,1236	0/0:24,0:24:64.60:0,65,2016	0/0:37,0:36:60.04:0,60,1137	0/0:46,0:43:99:0,114,2231	0/0:29,0:29:68.96:0,69,2372	0/0:50,0:50:99:0,139,4012	0/0:9,0:9:27.08:0,27,883	0/0:32,0:32:84.20:0,84,2721	1/1:10,44:54:84.13:2252,84,0	1/1:9,36:45:69.11:1670,69,0	0/0:46,0:46:99:0,126,3932	0/0:42,0:42:99:0,123,3556	0/0:39,0:39:99:0,99,3044	0/0:23,0:23:65.74:0,66,2268	0/0:17,0:15:41.96:0,42,916	0/0:20,0:20:27.98:0,28,443	0/0:84,0:85:99:0,195,5772	1/1:5,20:25:0.24:426,0,0	0/0:24,0:23:51.16:0,51,1791	0/0:46,0:46:99:0,117,3615	0/0:24,0:24:69.15:0,69,2070	0/0:26,0:26:58.10:0,58,1010	0/0:28,0:29:44.40:0,44,624	0/0:16,0:15:42.06:0,42,1082
chr10	82047590	.	GTGTATGTC	G	3514.05	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.022;DP=881;FS=10.200;HRun=0;HaplotypeScore=251.0903;InbreedingCoeff=0.9965;MQ=61.43;MQ0=10;MQRankSum=-11.047;QD=29.78;ReadPosRankSum=3.049;VQSLOD=1.6360;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:39.13:0,39,818	0/0:16,0:16:41.92:0,42,1323	0/0:24,0:12:33.11:0,33,681	0/0:43,0:32:75.99:0,76,1684	0/0:15,0:15:42.13:0,42,1341	0/0:24,0:24:65.20:0,65,2061	0/0:35,0:34:54.08:0,54,1291	0/0:45,0:42:99:0,114,2718	0/0:28,0:28:66.01:0,66,2420	0/0:49,0:49:99:0,133,4243	0/0:10,0:10:30.09:0,30,947	0/0:32,0:32:84.25:0,84,2855	1/1:50,2:52:80.09:1802,80,0	1/1:43,1:44:63.14:1325,63,0	0/0:46,0:46:99:0,129,4122	0/0:44,0:44:99:0,129,3869	0/0:37,0:37:96.33:0,96,3300	0/0:21,0:21:60.20:0,60,2297	0/0:16,0:14:42.13:0,42,1123	0/0:14,0:14:30.01:0,30,563	0/0:77,0:77:99:0,177,5936	1/1:21,1:22:17.95:387,18,0	0/0:22,0:21:51.15:0,51,1756	0/0:45,0:46:99:0,125,3890	0/0:23,0:23:60.68:0,61,2169	0/0:24,0:24:37.61:0,38,914	0/0:25,0:25:44.83:0,45,829	0/0:17,0:16:42.12:0,42,1189
chr10	82050031	.	C	CTA	157.37	PASS	AB=0.821;AC=2;AF=0.50;AN=4;BaseQRankSum=-0.480;DP=21;FS=3.522;HRun=0;HaplotypeScore=56.1176;MQ=192.08;MQ0=8;MQRankSum=-0.480;QD=10.49;ReadPosRankSum=-0.898;VQSLOD=3.0557;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:4,5:7:3.85:200,0,4	0/1:6,0:5:0.58:19,0,1	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	82050458	.	GGA	G	677.11	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.772;DP=547;FS=5.589;HRun=0;HaplotypeScore=75.5241;InbreedingCoeff=0.9398;MQ=74.07;MQ0=1;MQRankSum=-0.609;QD=27.08;ReadPosRankSum=-0.201;VQSLOD=4.5455;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:25:60.09:772,60,0	0/0:6,0:6:15.05:0,15,253	0/0:26,0:20:34.16:0,34,554	0/0:20,1:17:30.62:0,31,384	0/0:36,0:36:99:0,99,1668	0/0:32,0:32:87.30:0,87,1464	0/0:11,0:11:27.09:0,27,456	0/0:25,0:25:57.19:0,57,957	0/0:22,0:22:66.21:0,66,1079	0/0:13,0:13:39.12:0,39,612	0/0:19,0:19:45.14:0,45,724	0/0:12,0:12:30.10:0,30,506	0/0:19,1:20:15.64:0,16,821	0/0:17,0:17:45.15:0,45,759	0/0:12,0:12:33.11:0,33,539	0/0:26,0:26:69.24:0,69,1162	0/0:19,0:19:54.18:0,54,911	0/0:4,0:4:12.04:0,12,202	0/0:20,0:20:51.17:0,51,856	0/0:24,0:24:66.21:0,66,1060	0/0:19,0:19:57.19:0,57,954	0/0:10,0:10:27.09:0,27,441	0/0:16,0:16:36.12:0,36,607	0/0:15,0:15:39.13:0,39,652	0/0:18,0:18:51.17:0,51,854	0/0:23,0:23:63.20:0,63,1017	0/0:33,0:33:87.27:0,87,1412	0/0:23,0:23:69.24:0,69,1164
chr10	82052101	.	T	TGCGC	4339.91	PASS	AB=0.952;AC=40;AF=0.800;AN=50;BaseQRankSum=-1.233;DP=392;FS=4.310;HRun=0;HaplotypeScore=148.6533;InbreedingCoeff=0.3203;MQ=35.96;MQ0=36;MQRankSum=-1.841;QD=13.44;ReadPosRankSum=0.937;VQSLOD=4.6526;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:20:17.71:0,18,237	./.	./.	./.	1/1:9,4:14:1.26:102,1,0	1/1:10,1:11:2.37:82,2,0	0/0:17,0:14:14.93:0,15,275	0/1:17,0:14:26.30:242,0,26	1/1:9,0:9:1.73:55,2,0	1/1:16,4:18:41.40:451,41,0	0/0:7,3:10:0.66:0,1,14	0/0:7,2:9:0:0,0,0	1/1:8,3:11:9.69:223,10,0	1/1:18,4:20:17.50:373,18,0	1/1:10,1:11:5.01:84,5,0	1/1:10,1:10:12.13:186,12,0	1/1:24,1:22:30.35:351,30,0	1/1:14,1:11:3.99:220,4,0	1/1:10,0:8:1:176,1,0	0/1:17,2:18:2.34:151,0,2	1/1:15,0:11:2.77:30,3,0	1/1:16,5:19:11.51:183,12,0	1/1:23,1:21:8.63:98,9,0	1/1:6,3:8:2.93:75,3,0	1/1:11,4:14:8.45:155,8,0	1/1:14,1:14:31.58:433,32,0	1/1:12,2:13:23.25:425,23,0	1/1:7,8:15:3.63:245,4,0
chr10	82052103	.	T	TGCGC	1557.72	PASS	AB=0.997;AC=27;AF=0.540;AN=50;BaseQRankSum=0.097;DP=385;FS=5.997;HRun=0;HaplotypeScore=166.7795;InbreedingCoeff=-0.0829;MQ=35.45;MQ0=34;MQRankSum=-1.161;QD=5.33;ReadPosRankSum=0.286;VQSLOD=2.0392;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:18:14.72:0,15,212	./.	./.	./.	0/1:14,0:14:28.67:32,0,29	1/1:10,1:11:2.37:35,2,0	0/0:17,0:14:18.06:0,18,281	0/1:19,0:16:20.48:99,0,20	0/1:9,0:9:7.66:8,0,31	1/1:18,0:16:9.78:178,10,0	0/1:10,0:10:1.37:1,0,6	0/0:8,1:9:2.80:0,3,13	0/1:11,0:11:5.88:103,0,6	0/1:21,1:20:29.64:150,0,30	0/1:10,0:10:0.18:10,0,0	1/1:9,1:9:9.04:133,9,0	1/1:26,0:23:3.44:90,3,0	0/1:15,0:11:47.73:48,0,56	0/1:10,0:8:2.15:41,0,2	0/1:19,0:18:36.24:36,0,43	0/0:15,0:11:2.48:0,2,7	0/1:22,0:20:6.29:44,0,6	0/0:24,0:21:3.38:0,3,19	1/1:9,0:8:2.93:38,3,0	1/1:15,0:14:7.87:58,8,0	0/1:15,0:14:10.65:193,0,11	1/1:12,1:12:23.70:257,24,0	0/1:14,0:14:60.27:149,0,60
chr10	82052133	.	C	CG	4094.27	PASS	AB=0.937;AC=49;AF=0.942;AN=52;BaseQRankSum=-0.118;DP=340;FS=3.788;HRun=1;HaplotypeScore=127.9911;InbreedingCoeff=0.0453;MQ=70.47;MQ0=8;MQRankSum=-3.816;QD=13.04;ReadPosRankSum=2.215;VQSLOD=2.8968;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:5,6:11:6.01:87,6,0	0/1:11,0:11:48.37:48,0,63	0/1:7,0:8:9.24:78,0,9	1/1:15,0:14:15.05:192,15,0	./.	1/1:19,0:17:23.99:245,24,0	1/1:14,0:14:39.06:420,39,0	1/1:10,0:10:11.62:103,12,0	1/1:12,0:12:27.07:325,27,0	1/1:9,0:9:8.82:90,9,0	1/1:9,1:10:6.01:77,6,0	1/1:19,0:16:20.81:228,21,0	1/1:13,0:13:5.98:80,6,0	1/1:8,0:8:6.02:78,6,0	1/1:7,0:7:9.03:110,9,0	1/1:19,0:19:18:211,18,0	1/1:3,6:8:6.02:71,6,0	1/1:9,0:8:24.07:290,24,0	1/1:15,0:15:12.02:140,12,0	1/1:12,0:11:3.01:43,3,0	1/1:15,0:15:9.03:114,9,0	1/1:17,0:17:15.04:191,15,0	1/1:12,0:12:11.90:154,12,0	0/1:11,1:11:0:0,0,0	1/1:12,0:11:33.04:352,33,0	1/1:9,0:9:18.03:211,18,0	1/1:7,0:7:15.03:154,15,0
chr10	82052253	.	CA	C	4873.38	PASS	AB=0.677;AC=44;AF=0.786;AN=56;BaseQRankSum=3.945;DP=555;FS=0.521;HRun=14;HaplotypeScore=70.3233;InbreedingCoeff=-0.0612;MQ=74.63;MQ0=0;MQRankSum=-0.499;QD=9.46;ReadPosRankSum=4.140;VQSLOD=4.3343;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,1:40:72.20:0,72,762	1/1:4,7:11:20.79:144,21,0	0/1:20,1:18:10.97:11,0,96	0/1:14,1:13:14.84:15,0,26	1/1:9,12:22:14.47:208,14,0	1/1:4,15:21:14.87:230,15,0	1/1:2,2:16:28.35:106,28,0	0/1:15,18:33:21.12:304,0,21	1/1:3,13:16:29.73:206,30,0	1/1:6,17:24:16.68:260,17,0	0/1:8,11:19:26.05:135,0,26	0/1:8,11:20:36.78:171,0,37	1/1:4,0:17:20.32:59,20,0	1/1:4,14:18:32.61:226,33,0	1/1:7,10:18:3.88:163,4,0	0/1:2,7:9:12.98:67,0,13	1/1:6,8:14:23.69:164,24,0	1/1:5,10:15:23.72:164,24,0	0/1:6,6:12:10.08:85,0,10	1/1:8,23:34:43.64:421,44,0	0/1:4,8:12:5.25:85,0,5	0/1:6,15:21:61.22:198,0,61	1/1:4,21:26:58.37:390,58,0	1/1:2,8:10:20.83:144,21,0	1/1:7,17:24:19.71:280,20,0	0/1:9,11:20:17.07:187,0,17	1/1:1,13:14:35.68:244,36,0	1/1:16,15:31:1.66:207,2,0
chr10	82052406	.	TG	T	11597.87	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=15.027;DP=612;FS=2.221;HRun=1;HaplotypeScore=167.7693;InbreedingCoeff=0.9994;MQ=90.13;MQ0=0;MQRankSum=-8.064;QD=23.43;ReadPosRankSum=4.248;VQSLOD=5.0044;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,2080	1/1:2,10:12:32.16:261,32,0	0/0:29,0:29:84.22:0,84,1301	0/0:26,0:26:78.26:0,78,1208	1/1:1,13:14:29.60:240,30,0	1/1:2,26:28:82.70:709,83,0	0/0:15,0:15:45.15:0,45,712	1/1:2,32:34:99:847,101,0	1/1:0,22:22:59.94:530,60,0	1/1:5,18:23:66.81:560,67,0	1/1:4,13:16:41.49:321,41,0	1/1:0,23:23:68.49:568,68,0	1/1:3,32:35:99:811,101,0	1/1:1,20:21:62.51:530,63,0	1/1:1,25:26:77.91:691,78,0	1/1:2,17:19:56.23:481,56,0	1/1:3,15:18:38.56:324,39,0	1/1:0,13:13:35.95:311,36,0	1/1:1,17:18:51.38:437,51,0	1/1:1,19:20:59.48:495,59,0	1/1:2,23:25:56.09:483,56,0	1/1:0,20:20:53.90:470,54,0	1/1:2,11:13:29.90:249,30,0	1/1:0,16:16:38.29:355,38,0	1/1:2,11:13:35.95:317,36,0	1/1:2,27:29:86.73:767,87,0	1/1:0,24:24:68.88:596,69,0	1/1:0,12:12:32.80:246,33,0
chr10	82052408	.	TC	T	11639.45	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=15.008;DP=612;FS=2.228;HRun=1;HaplotypeScore=166.4564;InbreedingCoeff=0.9995;MQ=90.12;MQ0=0;MQRankSum=-8.314;QD=23.47;ReadPosRankSum=4.347;VQSLOD=5.0141;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,129,1984	1/1:2,10:12:32.04:260,32,0	0/0:29,0:29:84.27:0,84,1274	0/0:26,0:26:78.26:0,78,1201	1/1:1,13:14:32.39:258,32,0	1/1:2,26:28:82.69:704,83,0	0/0:15,0:15:45.15:0,45,719	1/1:5,30:35:99:830,100,0	1/1:1,22:23:68.87:593,69,0	1/1:5,18:23:66.01:556,66,0	1/1:4,13:16:38.45:294,38,0	1/1:0,23:23:68.41:566,68,0	1/1:2,32:34:98.08:786,98,0	1/1:1,20:21:62.39:527,62,0	1/1:1,25:26:77.90:687,78,0	1/1:2,17:19:56.31:480,56,0	1/1:1,15:16:32.99:290,33,0	1/1:1,13:14:38.92:330,39,0	1/1:0,18:18:51.41:449,51,0	1/1:1,19:20:59.25:492,59,0	1/1:2,23:25:58.90:505,59,0	1/1:2,20:22:59.86:513,60,0	1/1:3,11:14:32.90:273,33,0	1/1:0,16:16:38.29:355,38,0	1/1:1,11:12:32.94:290,33,0	1/1:1,27:28:83.73:740,84,0	1/1:0,24:24:68.37:595,68,0	1/1:0,12:12:35.77:266,36,0
chr10	82053270	.	GA	G	12825.93	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.467;DP=752;FS=11.560;HRun=11;HaplotypeScore=94.7012;InbreedingCoeff=0.9277;MQ=62.97;MQ0=3;MQRankSum=-3.249;QD=17.96;ReadPosRankSum=3.087;VQSLOD=4.9319;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,44:48:99:886,108,0	1/1:0,14:14:32.91:265,33,0	0/0:19,1:13:12.83:0,13,282	0/0:18,0:13:7.95:0,8,167	1/1:3,23:26:62.91:515,63,0	1/1:3,15:18:41.94:344,42,0	1/1:3,24:27:65.92:542,66,0	1/1:2,26:29:72.93:562,73,0	1/1:7,31:38:74.88:616,75,0	1/1:6,24:30:65.84:536,66,0	1/1:4,16:20:38.93:320,39,0	1/1:6,21:27:24.92:411,25,0	1/1:9,19:28:53.90:443,54,0	1/1:2,22:25:44.93:369,45,0	1/1:6,31:37:19.99:574,20,0	1/1:4,32:36:77.90:640,78,0	1/1:3,39:42:99:887,108,0	1/1:5,14:20:40.03:307,40,0	1/1:5,15:20:41.64:328,42,0	1/1:7,28:35:71.89:591,72,0	1/1:3,26:29:65.92:542,66,0	1/1:4,19:23:49.43:391,49,0	1/1:4,20:24:47.92:393,48,0	1/1:1,36:37:98.88:813,99,0	1/1:2,25:27:56.92:467,57,0	1/1:2,22:24:62.89:517,63,0	1/1:3,21:24:56.83:468,57,0	1/1:1,5:6:11.98:99,12,0
chr10	82053685	.	TC	T	21922.62	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=15.484;DP=704;FS=2.810;HRun=2;HaplotypeScore=170.6455;InbreedingCoeff=0.9996;MQ=89.13;MQ0=0;MQRankSum=-8.171;QD=36.97;ReadPosRankSum=4.992;VQSLOD=4.1517;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.33:0,96,1438	1/1:0,12:12:36.12:466,36,0	0/0:22,0:22:60.20:0,60,899	0/0:29,0:30:73.48:0,73,1119	1/1:1,29:30:84.27:1091,84,0	1/1:1,28:29:72.23:935,72,0	0/0:27,0:27:78.24:0,78,1147	1/1:1,31:32:93.30:1208,93,0	1/1:0,23:23:69.22:896,69,0	1/1:1,25:26:75.24:970,75,0	1/1:0,21:21:63.20:818,63,0	1/1:2,22:24:66.21:857,66,0	1/1:0,24:24:66.21:855,66,0	1/1:0,22:22:60.20:779,60,0	1/1:1,35:36:99:1325,102,0	1/1:0,26:26:78.25:1013,78,0	1/1:0,24:24:69.22:896,69,0	1/1:0,11:11:33.11:429,33,0	1/1:0,29:29:87.28:1130,87,0	1/1:0,26:26:75.24:974,75,0	1/1:0,16:16:45.15:584,45,0	1/1:0,26:26:75.24:974,75,0	1/1:1,38:39:99:1400,108,0	1/1:2,18:20:51.17:662,51,0	1/1:1,21:22:63.20:818,63,0	1/1:1,32:33:96.31:1247,96,0	1/1:1,32:33:96.31:1246,96,0	1/1:0,9:9:27.09:351,27,0
chr10	82054088	.	TC	T	16336.01	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.562;DP=661;FS=6.585;HRun=6;HaplotypeScore=93.6923;InbreedingCoeff=0.9948;MQ=86.68;MQ0=0;MQRankSum=-9.192;QD=27.55;ReadPosRankSum=7.557;VQSLOD=4.1373;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:30:50.31:720,50,0	1/1:0,7:7:18.05:193,18,0	0/0:27,0:26:66.19:0,66,823	0/0:27,0:27:68.98:0,69,847	1/1:2,22:24:63.16:677,63,0	1/1:1,22:23:54.13:580,54,0	0/0:14,0:14:42.10:0,42,533	1/1:4,34:37:96.22:1023,96,0	1/1:1,31:32:93.23:996,93,0	1/1:4,39:43:99:1223,114,0	1/1:1,25:26:47.91:659,48,0	1/1:2,21:23:60.15:645,60,0	1/1:2,28:30:81.20:871,81,0	1/1:3,27:30:84.21:902,84,0	1/1:0,31:31:87.22:935,87,0	1/1:3,14:17:42:435,42,0	1/1:1,17:18:45.11:484,45,0	1/1:1,9:10:24.06:258,24,0	1/1:2,23:25:69.17:742,69,0	1/1:3,18:21:48.11:516,48,0	1/1:1,20:21:51.13:548,51,0	1/1:2,12:14:33.08:354,33,0	1/1:1,24:25:57.14:613,57,0	1/1:1,13:14:39.10:419,39,0	1/1:3,24:27:69.17:741,69,0	1/1:1,26:27:75.19:806,75,0	1/1:2,26:28:72.18:770,72,0	1/1:0,9:9:21.05:226,21,0
chr10	82054692	.	CT	C	21234.61	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=6.820;DP=737;FS=6.460;HRun=3;HaplotypeScore=78.6624;InbreedingCoeff=0.9891;MQ=80.99;MQ0=0;MQRankSum=-4.867;QD=33.49;ReadPosRankSum=5.155;VQSLOD=5.2127;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,1817	1/1:0,4:4:12.04:149,12,0	0/0:22,0:22:58.96:0,59,756	0/0:15,0:15:33.09:0,33,450	1/1:1,28:29:84.26:1035,84,0	1/1:0,23:23:69.22:855,69,0	0/0:22,0:22:66.21:0,66,933	1/1:2,31:33:93.20:1074,93,0	1/1:0,32:32:90.28:1115,90,0	1/1:0,34:34:99:1211,99,0	1/1:2,25:27:69.22:850,69,0	1/1:0,27:27:69.22:854,69,0	1/1:0,33:33:90.09:1115,90,0	1/1:0,20:20:51.16:632,51,0	1/1:2,38:40:99:1338,108,0	1/1:0,33:33:87.27:1078,87,0	1/1:0,28:28:72.23:892,72,0	1/1:2,13:15:33.10:409,33,0	1/1:1,18:19:54.14:647,54,0	1/1:0,29:29:81.25:1003,81,0	1/1:0,17:17:39.12:483,39,0	1/1:0,28:28:75.24:925,75,0	1/1:0,29:29:81.09:1002,81,0	1/1:0,29:29:81.25:1004,81,0	1/1:2,30:32:84.26:1040,84,0	1/1:0,34:34:99:1224,102,0	1/1:0,32:32:87.27:1078,87,0	1/1:0,7:7:18.06:223,18,0
chr10	82054972	.	TACACAC	T	7164.32	PASS	AB=0.591;AC=45;AF=0.833;AN=54;BaseQRankSum=4.521;DP=628;FS=7.120;HRun=0;HaplotypeScore=182.7391;InbreedingCoeff=0.6828;MQ=67.20;MQ0=6;MQRankSum=-7.093;QD=15.75;ReadPosRankSum=3.871;VQSLOD=3.6038;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:48:36.09:0,36,831	1/1:8,4:14:18.06:307,18,0	0/0:32,0:23:5.99:0,6,141	0/0:41,0:27:9.03:0,9,126	1/1:15,9:25:18.06:342,18,0	1/1:8,11:19:23.14:467,23,0	0/0:29,0:29:21.54:0,22,529	1/1:19,0:19:2.70:30,3,0	1/1:7,11:19:33.11:652,33,0	1/1:18,2:22:12.04:184,12,0	1/1:9,6:15:9.03:183,9,0	1/1:15,6:21:12.04:245,12,0	0/1:4,0:13:4.11:297,0,4	1/1:8,0:25:38.96:490,39,0	1/1:10,5:15:15.05:306,15,0	1/1:9,8:17:21.07:410,21,0	1/1:8,11:18:21.03:388,21,0	1/1:8,4:12:9.03:184,9,0	1/1:14,0:16:6.02:84,6,0	1/1:18,0:23:9.49:112,9,0	./.	1/1:12,0:22:20.58:293,21,0	1/1:10,10:20:27.09:514,27,0	1/1:21,5:26:5.23:121,5,0	1/1:15,19:36:43.03:840,43,0	1/1:9,0:18:17.90:251,18,0	1/1:15,0:27:28.34:381,28,0	1/1:7,0:10:6.02:84,6,0
chr10	82055150	.	T	TAG	866.24	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.270;DP=576;FS=10.737;HRun=0;HaplotypeScore=74.4607;InbreedingCoeff=0.9772;MQ=73.70;MQ0=1;MQRankSum=-0.913;QD=34.65;ReadPosRankSum=-0.690;VQSLOD=5.1386;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:24:57.19:961,57,0	0/0:14,0:14:36.10:0,36,449	0/0:25,0:24:47.03:0,47,588	0/0:25,0:25:27.13:0,27,482	0/0:20,0:20:48.13:0,48,614	0/0:30,0:30:81.19:0,81,1016	0/0:22,0:22:54.16:0,54,679	0/0:20,0:20:45.14:0,45,567	0/0:27,0:27:60.18:0,60,758	0/0:18,0:18:45.14:0,45,567	0/0:13,0:13:30.10:0,30,385	0/0:17,0:17:36.12:0,36,459	0/0:20,0:20:57.12:0,57,713	0/0:25,0:25:66.21:0,66,848	0/0:21,0:21:54.15:0,54,666	0/0:14,0:14:42.14:0,42,540	0/0:22,0:22:63.18:0,63,794	0/0:15,0:15:27.09:0,27,348	0/0:20,0:20:39.13:0,39,502	0/0:22,0:22:54.16:0,54,679	0/0:15,0:15:36.10:0,36,448	0/0:24,0:24:60.19:0,60,770	0/0:12,0:12:33.09:0,33,410	0/0:24,0:24:66.21:0,66,848	0/0:24,0:24:69.21:0,69,875	0/0:12,0:12:33.09:0,33,410	0/0:33,0:33:84.24:0,84,1052	0/0:17,0:17:14.03:0,14,505
chr10	82055412	.	AAG	A	373.49	PASS	AB=0.888;AC=26;AF=0.722;AN=36;BaseQRankSum=-0.024;DP=519;FS=6.615;HRun=0;HaplotypeScore=72.9142;InbreedingCoeff=0.1635;MQ=63.69;MQ0=11;MQRankSum=0.122;QD=1.60;ReadPosRankSum=-2.025;VQSLOD=0.5628;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:5,0:5:3.01:31,3,0	./.	./.	1/1:14,0:12:3:25,3,0	1/1:21,0:21:3:25,3,0	0/1:17,0:21:4.18:9,0,4	0/0:26,0:26:0:0,0,0	./.	./.	./.	1/1:14,3:18:5.84:45,6,0	./.	0/0:22,0:22:6.01:0,6,63	1/1:11,0:11:6:57,6,0	1/1:8,4:12:3.01:31,3,0	0/1:27,1:29:66.73:67,0,131	1/1:14,0:15:2.84:14,3,0	./.	./.	1/1:20,0:20:3:26,3,0	0/0:10,0:10:3.01:0,3,40	0/0:22,0:22:0:0,0,0	1/1:14,2:16:6.01:63,6,0	./.	1/1:17,0:17:3:31,3,0	1/1:23,0:27:5.58:28,6,0	1/1:6,0:4:2.99:24,3,0
chr10	82055826	.	TAGATAGATAGATAGATGATAGATAGATAGATGATAGATAGATAGATAGATAGATA	T	2114.07	PASS	AB=0.979;AC=12;AF=0.250;AN=48;BaseQRankSum=6.448;DP=396;FS=2.469;HRun=0;HaplotypeScore=406.9073;InbreedingCoeff=-0.0208;MQ=39.89;MQ0=31;MQRankSum=-2.781;QD=14.78;ReadPosRankSum=5.156;VQSLOD=1.0296;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:25:33.04:0,33,779	0/0:6,0:6:6.01:0,6,62	./.	./.	0/0:12,0:11:3.01:0,3,31	0/0:8,0:7:6.02:0,6,75	0/0:17,0:14:27.91:0,28,276	0/0:18,0:10:27.06:0,27,293	0/0:19,0:16:11.72:0,12,101	0/1:24,0:23:99:238,0,197	0/0:19,0:19:3:0,3,26	0/1:12,0:12:7.67:8,0,38	0/1:18,0:15:6.43:6,0,201	0/0:14,0:10:11.52:0,12,131	0/0:19,0:17:21.67:0,22,197	0/1:19,0:18:99:126,0,110	0/0:14,0:13:17.98:0,18,338	0/1:13,0:12:99:176,0,100	0/1:8,0:5:99:151,0,304	0/0:26,0:25:12.02:0,12,144	./.	0/0:21,0:19:2.99:0,3,23	1/1:10,0:8:3.01:104,3,0	./.	0/0:9,0:9:10.76:0,11,99	1/1:2,19:18:42.14:1098,42,0	0/1:12,0:12:99:188,0,120	0/1:4,0:5:99:160,0,401
chr10	82055827	.	A	AGAT	3611.86	PASS	AB=0.973;AC=35;AF=0.795;AN=44;BaseQRankSum=-2.852;DP=391;FS=0.000;HRun=0;HaplotypeScore=159.5343;InbreedingCoeff=0.2001;MQ=39.58;MQ0=31;MQRankSum=-0.669;QD=12.81;ReadPosRankSum=-1.986;VQSLOD=2.6911;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:25:30.16:0,30,440	1/1:6,0:6:6.02:84,6,0	./.	./.	1/1:12,0:11:3.01:42,3,0	1/1:8,0:7:6.01:67,6,0	1/1:17,0:14:23.79:359,24,0	1/1:18,0:10:23.28:246,23,0	1/1:19,0:16:6.86:121,7,0	0/1:24,0:23:1.62:418,0,2	./.	1/1:11,1:12:5.92:88,6,0	1/1:16,0:13:18.06:319,18,0	1/1:14,0:10:6.02:106,6,0	1/1:18,1:17:24:388,24,0	1/1:18,1:18:20.99:325,21,0	0/1:14,1:14:34.46:147,0,34	0/1:12,1:12:25.02:250,0,25	0/1:8,0:5:34.93:203,0,35	1/1:25,0:24:3.01:42,3,0	./.	./.	1/1:11,0:8:3.01:45,3,0	./.	1/1:9,0:9:6.02:130,6,0	0/0:21,0:18:22.70:0,23,75	1/1:11,1:12:15.03:228,15,0	0/1:5,0:5:5.51:6,0,49
chr10	82055830	.	TA	T	2826.29	PASS	AB=0.681;AC=34;AF=0.773;AN=44;BaseQRankSum=-2.648;DP=378;FS=2.944;HRun=1;HaplotypeScore=152.4457;InbreedingCoeff=0.0756;MQ=39.04;MQ0=31;MQRankSum=0.290;QD=10.51;ReadPosRankSum=-4.082;VQSLOD=0.2303;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,2:25:30.35:0,30,437	1/1:0,6:6:6.02:84,6,0	./.	./.	1/1:2,10:11:2.88:42,3,0	1/1:4,4:7:6.01:67,6,0	1/1:8,8:13:23.05:328,23,0	0/1:12,5:9:79.34:186,0,79	1/1:9,10:16:7.03:121,7,0	0/1:2,0:22:8.44:356,0,8	./.	1/1:2,10:12:5.92:65,6,0	1/1:4,11:12:18.06:243,18,0	1/1:4,8:8:6.02:81,6,0	1/1:3,16:17:23.94:295,24,0	1/1:2,17:18:20.94:276,21,0	0/1:7,8:14:32.96:148,0,33	0/1:6,6:11:28.58:160,0,29	0/1:3,4:5:32.92:147,0,33	1/1:1,0:22:3.01:42,3,0	./.	./.	1/1:5,6:8:3.01:44,3,0	./.	1/1:0,7:7:6.02:78,6,0	0/0:21,0:18:29.60:0,30,266	1/1:3,8:11:14.99:172,15,0	0/1:4,1:5:32.62:33,0,64
chr10	82055842	.	T	TA	1115.37	PASS	AB=0.827;AC=28;AF=0.700;AN=40;BaseQRankSum=2.162;DP=324;FS=1.532;HRun=1;HaplotypeScore=146.1538;InbreedingCoeff=0.2344;MQ=35.55;MQ0=34;MQRankSum=-0.484;QD=6.06;ReadPosRankSum=0.109;VQSLOD=0.3128;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,3:21:12.01:0,12,144	./.	./.	./.	./.	0/0:3,3:5:0.89:0,1,2	1/1:8,2:7:5.29:37,5,0	0/0:10,0:3:9.03:0,9,108	1/1:5,8:13:1.19:3,1,0	0/1:23,0:22:12.28:155,0,12	./.	1/1:1,10:11:3.01:40,3,0	1/1:3,8:8:9.03:129,9,0	1/1:5,5:6:2.98:22,3,0	1/1:3,9:10:3:26,3,0	1/1:1,12:12:6.02:93,6,0	0/0:5,6:10:0.60:0,1,2	1/1:7,3:8:11.70:131,12,0	0/1:4,3:4:29.90:124,0,30	./.	./.	./.	1/1:4,6:7:3.01:52,3,0	0/1:6,3:4:0:0,0,0	1/1:2,5:7:5.98:46,6,0	1/1:22,0:18:15.02:197,15,0	1/1:0,7:7:9.03:141,9,0	0/1:5,1:6:37.95:38,0,71
chr10	82055854	.	AGAT	A	320.17	PASS	AB=0.986;AC=18;AF=0.529;AN=34;BaseQRankSum=2.657;DP=424;FS=4.243;HRun=0;HaplotypeScore=156.3500;InbreedingCoeff=-0.0888;MQ=32.97;MQ0=37;MQRankSum=-0.702;QD=1.40;ReadPosRankSum=1.316;VQSLOD=2.3489;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,1:19:6.85:73,7,0	0/1:11,0:10:0:0,0,0	./.	./.	./.	0/0:17,0:15:1:0,1,3	0/0:10,2:9:0.03:0,0,2	0/0:14,0:6:11.92:0,12,120	1/1:16,0:14:0.89:3,1,0	0/1:26,0:25:24.27:24,0,92	./.	./.	0/0:17,0:14:5.97:0,6,17	./.	0/1:15,1:14:0:0,0,0	1/1:18,0:17:2.89:45,3,0	1/1:18,0:16:1.07:15,1,0	0/1:16,1:14:65.73:66,0,115	0/1:11,0:7:27.90:28,0,143	./.	./.	./.	1/1:13,0:10:3.01:45,3,0	./.	./.	0/1:29,0:25:55.66:56,0,302	0/1:12,0:11:44.73:57,0,45	0/1:13,0:11:13.45:13,0,167
chr10	82055873	.	A	AGAT	130.48	PASS	AB=0.958;AC=10;AF=0.294;AN=34;BaseQRankSum=0.011;DP=575;FS=3.819;HRun=0;HaplotypeScore=116.5935;InbreedingCoeff=0.2444;MQ=27.85;MQ0=106;MQRankSum=-2.422;QD=0.71;ReadPosRankSum=-3.770;VQSLOD=0.6344;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:23:11.85:0,12,94	0/1:11,0:8:0:0,0,0	./.	./.	./.	1/1:23,0:14:5.20:46,5,0	0/1:12,3:12:0.02:0,0,0	0/1:41,0:15:51.79:52,0,170	0/0:20,0:9:0.50:0,1,2	0/1:32,0:27:1.13:1,0,140	./.	./.	1/1:19,0:9:8.25:39,8,0	0/0:20,0:8:0:0,0,0	0/1:25,0:11:0:0,0,0	0/0:16,0:9:0:0,0,0	0/0:24,0:15:2.62:0,3,45	0/0:19,0:11:7.66:0,8,152	0/0:16,0:5:12.84:0,13,112	./.	./.	./.	./.	./.	./.	0/0:39,0:28:9.55:0,10,310	0/0:17,0:10:1.23:0,1,40	0/1:16,0:12:89.49:89,0,135
chr10	82055880	.	TA	T	1302.88	PASS	AB=0.814;AC=18;AF=0.529;AN=34;BaseQRankSum=-0.963;DP=598;FS=8.082;HRun=1;HaplotypeScore=99.6097;InbreedingCoeff=0.2174;MQ=27.28;MQ0=125;MQRankSum=-0.974;QD=4.30;ReadPosRankSum=-1.605;VQSLOD=-0.6107;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:20:5.37:0,5,82	0/1:9,4:10:0:0,0,0	./.	./.	./.	1/1:21,5:15:5.14:79,5,0	0/0:18,0:11:0.47:0,0,1	0/1:39,7:16:46.49:256,0,46	1/1:15,5:9:0.42:1,0,0	1/1:30,3:27:9.43:190,9,0	./.	./.	1/1:14,4:8:8.92:125,9,0	0/0:12,9:9:0:0,0,0	0/1:15,11:11:0:0,0,0	0/0:11,8:11:0:0,0,0	0/1:21,2:14:0.16:0,0,0	0/1:18,2:11:28.56:29,0,114	0/0:15,0:4:7.66:0,8,36	./.	./.	./.	./.	./.	./.	1/1:27,14:29:35.81:458,36,0	1/1:14,5:10:3.70:44,4,0	0/1:11,7:12:83.42:224,0,83
chr10	82055881	.	A	AGAT	2524.65	PASS	AB=0.862;AC=19;AF=0.559;AN=34;BaseQRankSum=-2.921;DP=610;FS=8.149;HRun=0;HaplotypeScore=101.8833;InbreedingCoeff=0.0819;MQ=27.12;MQ0=131;MQRankSum=0.063;QD=8.12;ReadPosRankSum=-3.186;VQSLOD=1.5974;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:20:1.89:0,2,34	0/0:6,7:10:0:0,0,0	./.	./.	./.	1/1:17,9:15:5.13:76,5,0	0/0:18,0:11:0:0,0,1	1/1:45,2:17:7.58:681,8,0	1/1:17,3:9:0.46:1,0,0	1/1:28,5:27:39.85:759,40,0	./.	./.	1/1:10,8:8:8.92:125,9,0	0/0:16,5:9:0:0,0,0	0/1:15,11:11:0.16:0,0,0	0/0:11,9:11:0:0,0,0	1/1:16,8:15:2.47:6,2,0	0/1:15,5:11:55.41:205,0,55	0/1:13,4:6:27.41:239,0,27	./.	./.	./.	./.	./.	./.	0/1:41,0:29:32.18:92,0,32	1/1:13,7:10:12.04:240,12,0	0/1:19,0:12:76.88:198,0,77
chr10	82055912	.	TACATA	T	404.57	PASS	AB=0.970;AC=9;AF=0.281;AN=32;BaseQRankSum=-2.012;DP=574;FS=8.827;HRun=0;HaplotypeScore=77.4929;InbreedingCoeff=0.1616;MQ=20.73;MQ0=154;MQRankSum=0.090;QD=2.12;ReadPosRankSum=-2.500;VQSLOD=0.2552;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:14:3.25:10,3,0	0/0:13,0:10:0:0,0,0	./.	./.	./.	0/0:28,0:15:1.74:0,2,21	./.	0/1:56,6:31:99:394,0,417	0/1:18,0:6:0.24:0,0,0	0/0:20,0:15:36.59:0,37,564	./.	./.	0/0:20,0:8:6.02:0,6,86	0/0:19,0:9:0:0,0,0	./.	0/0:20,0:11:0:0,0,0	0/1:20,0:11:0:1,0,0	0/0:26,1:10:16.34:0,16,256	0/1:18,1:10:78.21:78,0,219	1/1:22,0:9:0.47:1,0,0	./.	./.	./.	./.	./.	0/0:34,0:16:5.10:0,5,440	0/0:23,0:9:9.92:0,10,150	0/1:21,0:8:8.74:9,0,219
chr10	82055920	.	TACATA	T	1678.27	PASS	AB=0.986;AC=15;AF=0.469;AN=32;BaseQRankSum=-3.033;DP=553;FS=15.003;HRun=0;HaplotypeScore=69.9523;InbreedingCoeff=-0.1936;MQ=20.35;MQ0=155;MQRankSum=0.661;QD=5.48;ReadPosRankSum=0.732;VQSLOD=0.5021;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:11:1.86:0,2,20	0/0:13,0:10:0:0,0,0	./.	./.	./.	1/1:28,0:15:3.70:27,4,0	./.	0/1:57,2:35:99:1222,0,164	0/1:18,0:6:0.24:0,0,0	0/1:18,0:13:6.68:7,0,255	./.	./.	1/1:20,0:7:5.39:39,5,0	0/0:18,0:9:0:0,0,0	./.	0/0:18,0:9:0:0,0,0	0/1:20,0:10:0.16:0,0,0	0/1:23,1:7:6.97:7,0,34	0/1:18,1:9:61.52:242,0,62	1/1:22,0:9:0.47:1,0,0	./.	./.	./.	./.	./.	0/1:34,0:16:65.24:65,0,231	0/1:23,0:9:10.81:62,0,11	0/1:21,0:8:71.02:98,0,71
chr10	82055928	.	TACATA	T	3623.26	PASS	AB=0.758;AC=18;AF=0.600;AN=30;BaseQRankSum=-0.057;DP=496;FS=6.758;HRun=0;HaplotypeScore=43.8349;InbreedingCoeff=0.0273;MQ=18.64;MQ0=159;MQRankSum=0.546;QD=13.13;ReadPosRankSum=-0.579;VQSLOD=1.2943;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:10:0.88:2,1,0	./.	./.	./.	./.	1/1:15,8:10:3.84:67,4,0	./.	0/1:33,19:35:52.87:1462,0,53	0/1:9,7:4:0.39:0,0,0	1/1:3,7:5:15.05:314,15,0	./.	./.	1/1:8,11:6:5.91:131,6,0	0/0:3,14:8:0:0,0,0	./.	0/0:1,15:7:0:0,0,0	0/1:11,5:5:0:0,0,0	0/1:19,4:5:12.02:123,0,12	0/1:11,7:8:24.56:405,0,25	0/0:7,11:5:0:0,0,0	./.	./.	./.	./.	./.	1/1:15,14:11:30.10:627,30,0	1/1:14,10:8:9.03:192,9,0	0/1:16,6:7:31.91:300,0,32
chr10	82056016	.	TACATA	T	3524.27	PASS	AB=0.750;AC=42;AF=0.808;AN=52;BaseQRankSum=2.702;DP=406;FS=3.225;HRun=0;HaplotypeScore=82.2793;InbreedingCoeff=0.3060;MQ=40.59;MQ0=111;MQRankSum=-0.878;QD=10.52;ReadPosRankSum=1.526;VQSLOD=2.3347;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:5:0.60:1,0,39	1/1:3,0:3:6.02:136,6,0	./.	./.	1/1:1,24:17:2.48:67,2,0	1/1:4,17:12:2.37:65,2,0	0/0:18,0:8:24.08:0,24,369	0/0:27,0:1:0.47:0,0,1	1/1:7,11:13:3.16:66,3,0	1/1:1,13:10:30.08:559,30,0	0/1:0,12:9:0.17:0,0,0	1/1:3,14:13:2.47:65,2,0	1/1:1,17:13:17.80:385,18,0	1/1:0,11:9:5.49:131,5,0	0/0:3,11:9:0:0,0,0	1/1:0,11:10:2.69:65,3,0	1/1:10,0:2:1.25:3,1,0	1/1:13,0:3:6.02:120,6,0	1/1:2,5:4:12.04:237,12,0	1/1:0,13:10:2.75:66,3,0	1/1:11,12:12:3.01:66,3,0	1/1:0,18:12:2.43:65,2,0	0/0:0,10:7:0:0,0,0	1/1:4,3:3:3.01:66,3,0	1/1:0,15:12:5.50:131,5,0	1/1:8,19:18:48.13:969,48,0	1/1:15,17:14:5.52:131,6,0	1/1:5,6:6:6.02:131,6,0
chr10	82056021	.	A	AGAT	3630.65	PASS	AB=1.000;AC=41;AF=0.759;AN=54;BaseQRankSum=2.003;DP=416;FS=1.301;HRun=0;HaplotypeScore=78.2177;InbreedingCoeff=0.3586;MQ=41.02;MQ0=107;MQRankSum=-1.064;QD=10.43;ReadPosRankSum=0.845;VQSLOD=3.3030;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:6:2.41:0,2,70	1/1:0,3:3:6.02:136,6,0	0/0:4,0:2:3.01:0,3,50	./.	1/1:25,0:17:2.42:67,2,0	1/1:21,0:12:2.58:65,3,0	0/0:17,0:8:24.08:0,24,400	1/1:29,0:2:6.01:77,6,0	1/1:19,0:14:2.80:65,3,0	1/1:15,0:11:30.08:563,30,0	0/1:13,0:10:0:1,0,0	1/1:17,0:13:2.84:66,3,0	1/1:19,0:14:17.89:385,18,0	1/1:11,0:9:5.68:131,6,0	0/0:14,0:9:0:0,0,0	1/1:11,0:10:2.80:66,3,0	0/0:6,4:4:0:0,0,0	1/1:9,4:3:6.02:116,6,0	1/1:8,0:4:12.04:231,12,0	1/1:13,0:10:2.84:67,3,0	1/1:21,0:12:3.01:66,3,0	1/1:18,0:12:2.61:65,3,0	0/0:11,0:7:0:0,0,0	1/1:7,0:3:3.01:66,3,0	1/1:15,0:12:5.68:131,6,0	1/1:27,0:19:48.13:969,48,0	1/1:31,0:14:5.80:131,6,0	1/1:12,0:7:9.03:168,9,0
chr10	82057183	.	G	GA	10648.27	PASS	AB=0.737;AC=47;AF=0.839;AN=56;BaseQRankSum=-10.275;DP=587;FS=7.146;HRun=10;HaplotypeScore=66.2558;InbreedingCoeff=0.6263;MQ=74.61;MQ0=0;MQRankSum=-2.657;QD=19.98;ReadPosRankSum=-0.761;VQSLOD=5.4575;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:31:57.51:0,58,165	1/1:1,6:7:17.99:179,18,0	0/1:13,0:16:12.69:13,0,116	0/0:8,0:8:14.97:0,15,123	1/1:8,21:31:25.36:586,25,0	0/1:5,19:23:1.16:400,0,1	0/0:15,0:15:38.95:0,39,320	1/1:13,20:33:32.49:548,32,0	1/1:3,21:24:39.10:416,39,0	1/1:7,13:20:16.28:411,16,0	1/1:7,12:20:8.57:265,9,0	1/1:3,14:17:39.10:416,39,0	1/1:5,20:25:51.13:544,51,0	1/1:6,12:18:39.98:417,40,0	1/1:2,24:26:57.14:608,57,0	1/1:6,19:25:39.06:404,39,0	1/1:6,18:24:53.83:558,54,0	1/1:6,14:20:14.27:359,14,0	1/1:4,17:21:45.10:472,45,0	1/1:7,23:30:69.12:721,69,0	1/1:2,6:8:18.05:192,18,0	1/1:2,9:11:21.05:224,21,0	1/1:1,22:23:54.14:576,54,0	1/1:2,11:14:26.23:314,26,0	1/1:5,25:31:25.76:664,26,0	1/1:4,29:35:68.40:869,68,0	0/1:7,8:15:46.01:46,0,81	1/1:1,14:15:42.11:448,42,0
chr10	82057385	.	GT	G	639.74	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.256;DP=589;FS=3.550;HRun=7;HaplotypeScore=62.6878;InbreedingCoeff=0.8689;MQ=71.40;MQ0=3;MQRankSum=-0.420;QD=21.32;ReadPosRankSum=0.667;VQSLOD=3.1815;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:30:72.15:735,72,0	0/0:6,0:6:18.06:0,18,225	0/0:27,1:16:4.90:0,5,192	0/0:22,1:20:22.88:0,23,339	0/0:20,0:20:57.18:0,57,715	0/0:25,0:25:75.23:0,75,930	0/0:15,0:15:41.87:0,42,502	0/0:30,0:30:75.24:0,75,942	0/0:11,0:11:33.09:0,33,402	0/0:24,0:24:63.19:0,63,781	0/0:21,0:21:57.18:0,57,717	0/0:23,0:23:69.22:0,69,867	0/0:28,0:28:78.25:0,78,976	0/0:21,0:21:48.15:0,48,604	0/0:16,0:16:45.14:0,45,566	0/0:18,0:19:54.04:0,54,652	0/0:25,0:25:66.19:0,66,815	0/0:14,0:14:39.11:0,39,472	0/0:27,0:26:63.13:0,63,737	0/0:34,0:34:99:0,102,1282	0/0:7,0:7:18.06:0,18,225	0/0:11,0:11:27.09:0,27,339	0/0:16,0:16:36.10:0,36,440	0/0:23,0:23:57.18:0,57,716	0/0:22,0:22:60.18:0,60,744	0/0:21,1:22:23.55:0,24,600	0/0:22,0:22:66.20:0,66,818	0/0:25,0:25:75.20:0,75,906
chr10	82058263	.	TAA	T	1466.46	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.573;DP=612;FS=0.000;HRun=3;HaplotypeScore=75.8228;InbreedingCoeff=0.9949;MQ=90.49;MQ0=0;MQRankSum=-3.943;QD=41.90;ReadPosRankSum=1.170;VQSLOD=3.0932;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:99:1561,102,0	0/0:7,0:7:21.07:0,21,406	0/0:28,0:28:81.23:0,81,1429	0/0:21,0:22:62.16:0,62,1065	0/0:28,0:28:84.27:0,84,1538	0/0:18,0:18:54.19:0,54,1035	0/0:21,0:21:63.22:0,63,1217	0/0:19,0:19:51.17:0,51,952	0/0:17,0:17:51.17:0,51,985	0/0:24,0:24:72.21:0,72,1346	0/0:15,0:15:42.14:0,42,806	0/0:23,0:23:69.22:0,69,1300	0/0:23,0:23:66.21:0,66,1241	0/0:20,0:20:57.20:0,57,1092	0/0:26,0:26:75.23:0,75,1378	0/0:22,0:22:63.20:0,63,1171	0/0:17,0:17:51.17:0,51,985	0/0:22,0:22:63.19:0,63,1153	0/0:18,0:18:48.16:0,48,927	0/0:26,0:26:75.25:0,75,1412	0/0:30,0:30:90.27:0,90,1632	0/0:23,0:23:66.23:0,66,1270	0/0:23,0:23:66.22:0,66,1237	0/0:29,0:29:78.21:0,78,1437	0/0:23,0:23:69.24:0,69,1332	0/0:25,0:25:75.24:0,75,1359	0/0:19,0:19:57.18:0,57,1062	0/0:9,0:9:27.09:0,27,522
chr10	82058578	.	AC	A	1522.96	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.010;DP=837;FS=4.447;HRun=4;HaplotypeScore=110.4569;InbreedingCoeff=0.9987;MQ=84.12;MQ0=0;MQRankSum=-4.625;QD=25.81;ReadPosRankSum=2.769;VQSLOD=2.4570;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,55:59:99:1618,135,0	0/0:11,0:11:33.11:0,33,459	0/0:29,0:29:75.53:0,76,997	0/0:23,0:23:57.19:0,57,793	0/0:27,0:27:72.21:0,72,973	0/0:37,0:37:99:0,111,1528	0/0:33,0:33:93.29:0,93,1283	0/0:26,0:26:78.25:0,78,1078	0/0:29,0:29:84.28:0,84,1175	0/0:28,0:28:81.27:0,81,1133	0/0:10,0:10:30.09:0,30,403	0/0:26,0:26:78.20:0,78,1053	0/0:38,0:38:99:0,108,1492	0/0:42,0:42:99:0,117,1589	0/0:33,0:33:96.30:0,96,1306	0/0:39,0:39:99:0,117,1607	0/0:43,0:43:99:0,123,1705	0/0:28,0:28:81.26:0,81,1115	0/0:23,0:23:57.03:0,57,797	0/0:22,0:22:60.20:0,60,839	0/0:45,0:45:99:0,132,1777	0/0:25,0:25:66.20:0,66,890	0/0:29,0:29:81.26:0,81,1116	0/0:27,0:27:75.18:0,75,994	0/0:32,0:32:81.25:0,81,1109	0/0:34,0:34:93.20:0,93,1182	0/0:28,0:28:81.26:0,81,1118	0/0:11,0:11:30.08:0,30,402
chr10	82058702	.	AC	A	903.16	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=11.051;DP=823;FS=12.336;HRun=1;HaplotypeScore=95.0757;InbreedingCoeff=0.9999;MQ=83.06;MQ0=0;MQRankSum=-8.016;QD=20.07;ReadPosRankSum=-1.089;VQSLOD=2.5016;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,43:45:99:998,127,0	0/0:19,0:19:57.16:0,57,859	0/0:23,0:23:69.23:0,69,1084	0/0:27,0:27:71.24:0,71,1025	0/0:30,0:30:90.31:0,90,1432	0/0:25,0:25:75.24:0,75,1175	0/0:34,0:34:99:0,102,1570	0/0:34,0:34:99:0,102,1566	0/0:20,0:20:60.20:0,60,956	0/0:31,0:31:93.32:0,93,1483	0/0:22,0:22:60.20:0,60,957	0/0:28,0:28:84.18:0,84,1285	0/0:32,0:32:96.33:0,96,1530	0/0:37,0:37:99:0,111,1751	0/0:41,0:41:99:0,123,1932	0/0:34,0:34:99:0,102,1537	0/0:27,0:27:81.28:0,81,1294	0/0:23,0:23:66.19:0,66,994	0/0:29,0:29:87.26:0,87,1311	0/0:34,0:34:99:0,102,1563	0/0:29,0:29:84.27:0,84,1315	0/0:33,0:33:99:0,99,1539	0/0:31,0:31:93.32:0,93,1483	0/0:40,0:40:99:0,120,1889	0/0:23,0:23:69.22:0,69,1079	0/0:25,0:25:75.23:0,75,1161	0/0:34,0:34:99:0,102,1590	0/0:13,0:13:39.11:0,39,598
chr10	82058704	.	ATTC	A	1464.98	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=10.758;DP=816;FS=12.411;HRun=0;HaplotypeScore=124.7095;InbreedingCoeff=0.9999;MQ=82.34;MQ0=0;MQRankSum=-7.650;QD=33.30;ReadPosRankSum=-0.692;VQSLOD=3.1672;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,43:44:99:1560,126,0	0/0:18,0:18:54.19:0,54,1302	0/0:22,0:22:65.59:0,66,1466	0/0:26,0:26:72.18:0,72,1566	0/0:30,0:30:90.31:0,90,2110	0/0:25,0:25:75.26:0,75,1847	0/0:33,0:33:99:0,99,2329	0/0:35,0:35:99:0,105,2519	0/0:20,0:20:60.19:0,60,1429	0/0:30,0:30:90.31:0,90,2216	0/0:22,0:22:63.22:0,63,1550	0/0:27,0:27:81.28:0,81,1972	0/0:32,0:32:96.33:0,96,2364	0/0:38,0:38:99:0,114,2686	0/0:43,0:43:99:0,129,3127	0/0:34,0:34:99:0,102,2416	0/0:27,0:27:81.28:0,81,1959	0/0:23,0:23:69.21:0,69,1637	0/0:26,0:26:78.27:0,78,1853	0/0:34,0:34:99:0,102,2484	0/0:27,0:27:81.28:0,81,1973	0/0:33,0:33:99:0,99,2398	0/0:31,0:31:93.32:0,93,2197	0/0:40,0:40:99:0,120,2924	0/0:24,0:24:72.25:0,72,1755	0/0:27,0:27:81.23:0,81,1854	0/0:33,0:33:99:0,99,2381	0/0:12,0:12:36.12:0,36,887
chr10	82058979	.	GGTGT	G	15117.13	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=16.326;DP=541;FS=25.843;HRun=0;HaplotypeScore=284.2515;InbreedingCoeff=0.9382;MQ=83.56;MQ0=0;MQRankSum=-14.332;QD=37.23;ReadPosRankSum=7.908;VQSLOD=3.2277;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,3807	1/1:1,9:10:30.09:427,30,0	0/0:27,0:24:68.45:0,68,1805	0/0:34,0:31:93.32:0,93,2485	1/1:0,12:12:20.93:254,21,0	1/1:0,11:11:33.11:486,33,0	0/0:29,0:29:87.30:0,87,2440	1/1:0,17:20:56.95:787,57,0	1/1:1,27:28:81.26:1163,81,0	1/1:0,18:18:54.18:804,54,0	1/1:0,8:8:17.99:237,18,0	1/1:1,33:34:99:1409,99,0	1/1:0,26:26:74.32:1071,74,0	1/1:0,32:32:93.31:1338,93,0	1/1:2,24:26:78.18:1085,78,0	1/1:1,25:26:74.51:1066,75,0	1/1:0,10:10:22.77:326,23,0	1/1:0,12:12:33.11:499,33,0	1/1:2,4:6:12.04:182,12,0	1/1:0,9:9:19.48:214,19,0	1/1:1,20:21:25.87:380,26,0	1/1:1,18:19:42.73:599,43,0	1/1:0,10:10:8.30:250,8,0	1/1:0,15:15:20.66:266,21,0	1/1:0,14:14:42.14:623,42,0	1/1:0,22:22:66.22:979,66,0	1/1:0,15:15:42.14:606,42,0	1/1:0,2:2:5.95:64,6,0
chr10	82058984	.	CAAAAG	C	17481.27	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=16.610;DP=550;FS=22.791;HRun=0;HaplotypeScore=287.1982;InbreedingCoeff=0.9357;MQ=88.90;MQ0=1;MQRankSum=-15.716;QD=42.43;ReadPosRankSum=8.221;VQSLOD=3.4513;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,4251	1/1:2,9:11:33.07:517,33,0	0/0:29,0:27:79.82:0,80,2466	0/0:36,0:34:96.29:0,96,2946	1/1:0,12:12:15.99:254,16,0	1/1:0,11:11:33.11:563,33,0	0/0:30,0:30:90.31:0,90,2932	1/1:3,17:20:57.19:947,57,0	1/1:0,27:27:78.27:1319,78,0	1/1:0,18:18:54.18:930,54,0	1/1:1,8:9:21.43:293,21,0	1/1:1,33:34:99:1653,99,0	1/1:3,26:28:81.75:1328,82,0	1/1:1,32:33:96.33:1598,96,0	1/1:1,24:25:72.72:1211,73,0	1/1:0,25:25:72.72:1212,73,0	1/1:0,10:10:22.01:360,22,0	1/1:0,12:12:33.11:576,33,0	1/1:0,4:4:12.04:210,12,0	1/1:1,9:10:17.49:227,17,0	1/1:2,20:22:28.95:449,29,0	1/1:0,21:21:41.02:663,41,0	1/1:0,10:10:18.06:305,18,0	1/1:0,15:15:16.94:254,17,0	1/1:0,14:14:42.14:722,42,0	1/1:1,22:23:66.23:1133,66,0	1/1:0,15:15:42.14:704,42,0	1/1:0,2:2:3.48:54,3,0
chr10	82058989	.	G	GC	6956.37	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=15.323;DP=667;FS=25.637;HRun=1;HaplotypeScore=328.2623;InbreedingCoeff=0.9638;MQ=84.68;MQ0=1;MQRankSum=-15.289;QD=13.10;ReadPosRankSum=5.011;VQSLOD=1.8518;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,1635	1/1:14,0:14:29.11:195,29,0	0/0:29,0:28:81.24:0,81,1004	0/0:34,0:34:85.50:0,86,1050	1/1:18,2:20:20.14:131,20,0	1/1:18,0:18:37.29:216,37,0	0/0:29,0:29:81.21:0,81,1020	1/1:33,0:33:93.67:707,94,0	1/1:33,3:36:81.01:436,81,0	1/1:23,2:25:72.45:471,72,0	1/1:10,0:10:23.18:159,23,0	1/1:38,0:38:98.99:516,99,0	1/1:34,1:34:83.02:484,83,0	1/1:38,0:38:99:529,99,0	1/1:30,1:31:76.55:377,77,0	1/1:27,0:27:72.15:382,72,0	1/1:17,1:18:34.58:193,35,0	1/1:15,2:17:40.68:258,41,0	1/1:10,0:10:23.31:162,23,0	1/1:12,0:12:17.34:129,17,0	1/1:28,0:28:31.17:187,31,0	1/1:25,0:25:42.74:216,43,0	1/1:13,0:13:20.02:107,20,0	1/1:22,0:22:28.86:186,29,0	1/1:16,0:16:43.11:245,43,0	1/1:24,0:24:65.93:334,66,0	1/1:18,0:18:47.90:278,48,0	1/1:3,0:3:5.91:58,6,0
chr10	82059322	.	G	GCTCCGGATTGACA	100145.70	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-4.746;DP=797;FS=8.086;HRun=0;HaplotypeScore=274.1577;InbreedingCoeff=0.9915;MQ=76.16;MQ0=0;MQRankSum=-14.660;QD=141.45;ReadPosRankSum=5.154;VQSLOD=4.0577;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:51:99:5313,99,0	1/1:2,4:8:15.05:895,15,0	0/0:26,0:26:75.24:0,75,2577	0/0:31,0:31:83.61:0,84,2801	1/1:10,8:20:41.66:2310,42,0	1/1:7,12:22:57.20:3420,57,0	0/0:31,0:31:93.31:0,93,3592	1/1:34,7:45:99:6487,129,0	1/1:15,25:45:99:7617,126,0	1/1:18,14:38:99:6080,111,0	1/1:12,12:24:63.22:3080,63,0	1/1:14,15:32:87.30:5004,87,0	1/1:19,14:37:99:5945,102,0	1/1:15,14:30:81.28:4817,81,0	1/1:11,21:32:96.33:5666,96,0	1/1:12,22:36:99:6087,99,0	1/1:10,6:20:42.14:2549,42,0	1/1:6,7:13:39.13:2117,39,0	1/1:18,4:24:63.09:2556,63,0	1/1:6,16:26:66.17:3995,66,0	1/1:16,7:23:54.19:2493,54,0	1/1:17,13:35:69.24:3609,69,0	1/1:10,14:27:63.22:3296,63,0	1/1:14,10:25:45.07:2586,45,0	1/1:12,11:27:66.23:3727,66,0	1/1:13,14:28:81.28:4690,81,0	1/1:15,13:34:78.27:4836,78,0	1/1:3,3:6:18.06:970,18,0
chr10	82059560	.	CCCT	C	1122.45	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.947;DP=655;FS=0.000;HRun=0;HaplotypeScore=123.5544;InbreedingCoeff=0.9974;MQ=82.82;MQ0=0;MQRankSum=-2.602;QD=38.71;ReadPosRankSum=3.736;VQSLOD=4.3343;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:69.24:1217,69,0	0/0:11,0:11:33.11:0,33,779	0/0:21,0:21:60.21:0,60,1389	0/0:19,0:19:51.17:0,51,1178	0/0:29,0:29:69.21:0,69,1631	0/0:27,0:27:78.27:0,78,1819	0/0:29,0:29:87.30:0,87,2026	0/0:32,0:32:96.33:0,96,2262	0/0:19,0:19:57.20:0,57,1315	0/0:30,0:30:90.30:0,90,2075	0/0:11,0:11:33.10:0,33,736	0/0:35,0:35:99:0,99,2309	0/0:22,0:22:63.22:0,63,1489	0/0:14,0:14:42.14:0,42,991	0/0:29,0:29:84.29:0,84,1987	0/0:35,0:35:99:0,99,2341	0/0:34,0:34:99:0,102,2384	0/0:25,0:25:75.26:0,75,1727	0/0:22,0:22:63.21:0,63,1431	0/0:17,0:17:51.18:0,51,1206	0/0:21,0:21:63.22:0,63,1483	0/0:22,0:22:63.21:0,63,1423	0/0:21,0:21:57.20:0,57,1345	0/0:29,0:29:87.30:0,87,2056	0/0:20,0:20:60.21:0,60,1400	0/0:26,0:26:75.26:0,75,1774	0/0:18,0:18:51.18:0,51,1206	0/0:8,0:8:24.07:0,24,522
chr10	82061334	.	A	AGAG	1168.89	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.910;DP=748;FS=2.874;HRun=0;HaplotypeScore=107.9193;InbreedingCoeff=0.9756;MQ=85.26;MQ0=0;MQRankSum=-3.251;QD=30.76;ReadPosRankSum=-1.458;VQSLOD=3.5040;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,105,1530	0/0:11,0:11:27.09:0,27,398	0/0:29,0:28:48.59:0,49,648	0/0:33,0:33:16.39:0,16,616	0/0:14,0:14:39.13:0,39,567	0/0:28,0:28:72.23:0,72,1040	1/1:13,24:38:22.04:1261,22,0	0/0:21,0:21:33.09:0,33,463	0/0:28,0:28:63.21:0,63,921	0/0:32,0:32:84.28:0,84,1224	0/0:19,0:19:42.13:0,42,594	0/0:23,0:23:63.20:0,63,901	0/0:28,0:28:72.24:0,72,1060	0/0:35,0:35:90.30:0,90,1318	0/0:27,0:27:78.25:0,78,1131	0/0:29,0:29:81.27:0,81,1193	0/0:35,0:35:90.26:0,90,1278	0/0:16,0:16:42.10:0,42,580	0/0:13,0:13:30.07:0,30,403	0/0:26,0:26:57.19:0,57,839	0/0:36,0:36:87.28:0,87,1249	0/0:33,0:33:78.26:0,78,1149	0/0:21,0:21:45.14:0,45,636	0/0:23,0:23:63.17:0,63,897	0/0:35,0:35:84.26:0,84,1216	0/0:28,0:28:69.23:0,69,1010	0/0:35,0:35:87.27:0,87,1240	0/0:7,0:7:18.06:0,18,265
chr10	82061721	.	AAAAT	A	2251.52	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.668;DP=659;FS=0.574;HRun=0;HaplotypeScore=105.2508;InbreedingCoeff=0.9806;MQ=74.96;MQ0=0;MQRankSum=-2.586;QD=35.18;ReadPosRankSum=3.315;VQSLOD=3.9316;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,36:39:96.33:1766,96,0	0/0:9,0:9:27.09:0,27,712	0/0:19,0:19:51.16:0,51,1233	0/0:15,0:15:11.73:0,12,759	0/0:36,0:36:99:0,105,2689	0/0:29,0:29:84.29:0,84,2206	1/1:8,17:25:33.11:607,33,0	0/0:18,0:18:45.15:0,45,1187	0/0:15,0:15:42.14:0,42,1109	0/0:41,0:40:99:0,123,3237	0/0:21,0:21:60.21:0,60,1584	0/0:22,0:22:66.23:0,66,1707	0/0:21,0:21:63.22:0,63,1664	0/0:25,0:25:72.24:0,72,1825	0/0:25,0:25:72.25:0,72,1902	0/0:29,0:29:84.27:0,84,2081	0/0:27,0:26:81.28:0,81,2107	0/0:21,0:21:63.22:0,63,1664	0/0:27,0:27:69.24:0,69,1797	0/0:20,0:20:57.20:0,57,1452	0/0:23,0:23:66.21:0,66,1689	0/0:19,0:19:54.18:0,54,1374	0/0:24,0:24:69.24:0,69,1812	0/0:29,0:29:87.29:0,87,2227	0/0:24,0:24:69.24:0,69,1785	0/0:31,0:31:87.30:0,87,2222	0/0:18,0:18:48.15:0,48,1213	0/0:7,0:7:21.07:0,21,555
chr10	82063341	.	TG	T	1429.06	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.684;DP=723;FS=2.822;HRun=3;HaplotypeScore=72.1164;InbreedingCoeff=0.9920;MQ=85.10;MQ0=0;MQRankSum=-3.768;QD=32.48;ReadPosRankSum=0.755;VQSLOD=3.9070;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,42:44:99:1524,123,0	0/0:14,0:14:42.14:0,42,605	0/0:21,0:21:54.18:0,54,746	0/0:23,0:23:63.18:0,63,875	0/0:27,0:27:78.26:0,78,1123	0/0:24,0:24:72.24:0,72,1036	0/0:26,0:26:78.26:0,78,1118	0/0:25,0:25:69.22:0,69,973	0/0:23,0:23:66.21:0,66,932	0/0:31,0:31:87.29:0,87,1246	0/0:22,0:22:66.20:0,66,917	0/0:17,0:17:51.17:0,51,728	0/0:31,0:31:93.31:0,93,1328	0/0:29,0:29:84.27:0,84,1190	0/0:36,0:36:99:0,108,1555	0/0:27,0:27:78.25:0,78,1105	0/0:34,0:34:99:0,99,1407	0/0:25,0:25:75.21:0,75,1045	0/0:23,0:23:66.22:0,66,951	0/0:37,0:37:99:0,108,1554	0/0:24,0:24:69.22:0,69,975	0/0:26,0:26:72.23:0,72,1017	0/0:22,0:22:66.19:0,66,928	0/0:18,0:18:54.18:0,54,778	0/0:32,0:32:96.32:0,96,1382	0/0:32,0:32:96.31:0,96,1362	0/0:23,0:23:69.23:0,69,984	0/0:7,0:7:18.06:0,18,253
chr10	82064022	.	GTGTTGT	G	1541.82	PASS	AB=0.996;AC=24;AF=0.444;AN=54;BaseQRankSum=0.963;DP=608;FS=2.376;HRun=0;HaplotypeScore=205.4371;InbreedingCoeff=-0.3364;MQ=67.64;MQ0=8;MQRankSum=3.095;QD=3.56;ReadPosRankSum=-5.341;VQSLOD=1.3029;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:36.11:466,36,0	0/1:7,0:7:1.61:49,0,2	./.	0/0:22,0:17:0.47:0,0,1	0/1:12,0:12:1.39:1,0,9	0/1:19,0:19:32.07:82,0,32	1/1:10,6:16:5.98:80,6,0	0/0:31,0:31:1.21:0,1,3	0/1:27,0:27:52.95:77,0,53	0/1:21,0:20:21.88:68,0,22	0/0:10,2:11:0.89:0,1,4	0/1:29,0:30:57.96:98,0,58	0/1:27,0:27:12.48:12,0,71	0/1:31,0:31:2.54:244,0,3	0/1:21,0:21:16.95:17,0,27	0/1:27,0:28:3.20:3,0,33	0/0:30,0:30:17.08:0,17,114	0/1:21,0:21:17.77:38,0,18	0/1:16,0:15:9.07:34,0,9	0/1:15,0:15:29.38:38,0,29	0/0:25,0:25:7.32:0,7,48	0/0:12,0:10:4.84:0,5,44	0/1:16,0:15:20.97:120,0,21	0/1:31,0:31:13.06:40,0,13	0/1:21,0:21:39.74:40,0,65	0/1:23,0:23:8.05:88,0,8	0/1:19,0:19:26.80:85,0,27	1/1:4,0:4:0.47:1,0,0
chr10	82064061	.	TTGTTGTTG	T	1027.07	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=2.872;DP=619;FS=7.091;HRun=0;HaplotypeScore=214.9980;InbreedingCoeff=0.4374;MQ=61.84;MQ0=5;MQRankSum=-3.419;QD=13.00;ReadPosRankSum=1.744;VQSLOD=2.0159;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:47.99:1092,48,0	0/0:8,0:8:22.46:0,22,296	0/0:24,0:20:49.94:0,50,577	0/0:31,0:20:52.68:0,53,566	0/0:23,0:23:61.99:0,62,829	0/0:22,0:22:62.49:0,62,853	0/0:16,0:16:30.06:0,30,333	0/0:21,0:20:55.36:0,55,520	0/0:27,0:27:77.10:0,77,1075	0/0:20,0:19:55.45:0,55,721	0/0:15,0:14:39.12:0,39,584	0/0:27,0:27:76.19:0,76,1132	0/0:27,0:27:47.61:0,48,919	0/1:24,0:24:27.25:27,0,635	0/0:26,0:26:74.11:0,74,1028	0/0:24,0:24:69.21:0,69,1051	0/0:27,0:27:81.23:0,81,1224	0/0:23,0:23:65.64:0,66,899	0/0:17,0:17:37.59:0,38,446	0/0:15,0:15:25.67:0,26,438	0/0:25,0:25:70.07:0,70,971	0/0:15,0:15:36.61:0,37,485	0/0:19,0:19:43.82:0,44,607	0/0:26,0:26:77.39:0,77,1088	0/0:23,0:23:67.33:0,67,983	0/0:29,0:29:7.09:0,7,723	0/1:23,0:23:22.86:23,0,612	0/0:10,0:10:22.08:0,22,219
chr10	82064159	.	AGT	A	755.70	PASS	AB=0.927;AC=25;AF=0.521;AN=48;BaseQRankSum=7.269;DP=555;FS=0.000;HRun=0;HaplotypeScore=73.9610;InbreedingCoeff=-0.1511;MQ=60.52;MQ0=13;MQRankSum=-3.254;QD=1.97;ReadPosRankSum=1.034;VQSLOD=1.5560;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,4:22:11.19:171,0,11	0/1:8,0:8:23.30:23,0,80	./.	./.	0/0:22,0:22:9.92:0,10,132	0/0:22,0:23:24.07:0,24,322	./.	./.	0/1:18,1:18:8.34:8,0,265	0/1:21,0:21:11.66:12,0,64	0/1:14,1:15:11.34:11,0,244	0/1:20,0:20:23.96:24,0,256	1/1:13,0:14:2.84:14,3,0	1/1:12,0:22:22.73:112,23,0	0/0:21,0:21:6.26:0,6,170	0/1:21,2:21:11.34:11,0,245	0/1:21,3:24:43.77:44,0,183	0/1:12,3:14:46.81:47,0,127	1/1:21,0:21:2.84:14,3,0	1/1:16,0:26:22.73:112,23,0	0/1:18,2:19:23.39:23,0,45	1/1:8,0:15:17.04:84,17,0	0/1:13,0:12:52.66:53,0,76	0/1:23,1:24:8.33:8,0,280	0/0:12,0:12:3.01:0,3,44	0/1:22,5:26:24.83:56,0,25	1/1:25,0:32:17.04:84,17,0	0/0:9,0:14:18.03:0,18,202
chr10	82064596	.	CCCCCA	C	1093.25	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.759;DP=675;FS=1.852;HRun=0;HaplotypeScore=127.2056;InbreedingCoeff=0.9987;MQ=83.45;MQ0=0;MQRankSum=-6.847;QD=52.06;ReadPosRankSum=-0.795;VQSLOD=3.4307;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:60.21:1188,60,0	0/0:12,0:12:36.12:0,36,1200	0/0:25,0:25:75.26:0,75,2363	0/0:27,0:27:78.24:0,78,2391	0/0:30,0:30:90.31:0,90,2931	0/0:35,0:35:99:0,105,3415	0/0:20,0:20:60.21:0,60,1971	0/0:32,0:32:96.31:0,96,2947	0/0:30,0:30:90.31:0,90,2985	0/0:29,0:29:83.22:0,83,2768	0/0:18,0:18:54.19:0,54,1751	0/0:27,0:27:81.28:0,81,2698	0/0:38,0:38:99:0,114,3711	0/0:26,0:26:78.27:0,78,2597	0/0:23,0:23:69.24:0,69,2299	0/0:22,0:22:66.23:0,66,2198	0/0:15,0:15:45.15:0,45,1500	0/0:31,0:31:93.32:0,93,3043	0/0:15,0:15:45.15:0,45,1451	0/0:23,0:23:69.24:0,69,2291	0/0:22,0:22:66.23:0,66,2128	0/0:14,0:14:39.13:0,39,1298	0/0:27,0:27:81.26:0,81,2566	0/0:15,0:14:45.15:0,45,1499	0/0:23,0:23:69.24:0,69,2272	0/0:30,0:30:90.31:0,90,2956	0/0:36,0:36:99:0,105,3484	0/0:9,0:9:27.09:0,27,898
chr10	82064603	.	GT	G	118.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.246;DP=692;FS=0.890;HRun=1;HaplotypeScore=74.0620;InbreedingCoeff=0.9993;MQ=80.71;MQ0=0;MQRankSum=-7.193;QD=5.95;ReadPosRankSum=0.130;VQSLOD=0.2865;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:48.50:214,48,0	0/0:12,0:12:36.12:0,36,575	0/0:24,0:24:72.23:0,72,1083	0/0:24,0:24:68.43:0,68,1003	0/0:32,0:32:96.29:0,96,1485	0/0:34,0:34:99:0,99,1559	0/0:19,0:19:57.18:0,57,873	0/0:33,0:33:99:0,99,1533	0/0:32,0:32:96.31:0,96,1508	0/0:28,0:28:84.29:0,84,1343	0/0:19,0:19:57.15:0,57,876	0/0:31,0:31:93.32:0,93,1480	0/0:39,0:39:99:0,117,1816	0/0:28,0:28:81.26:0,81,1271	0/0:24,0:24:72.25:0,72,1145	0/0:24,0:24:72.20:0,72,1080	0/0:17,0:17:51.17:0,51,810	0/0:31,0:31:93.32:0,93,1478	0/0:19,0:19:57.19:0,57,908	0/0:23,0:23:69.23:0,69,1079	0/0:22,0:22:66.23:0,66,1055	0/0:14,0:14:42.13:0,42,648	0/0:26,0:26:78.25:0,78,1208	0/0:16,0:15:48.12:0,48,739	0/0:24,0:24:72.23:0,72,1129	0/0:29,0:29:87.25:0,87,1363	0/0:38,0:38:99:0,111,1741	0/0:10,0:10:30.10:0,30,479
chr10	82064605	.	AACAAAAG	A	851.19	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.245;DP=694;FS=2.028;HRun=0;HaplotypeScore=159.9787;InbreedingCoeff=0.9993;MQ=80.61;MQ0=0;MQRankSum=-7.145;QD=42.56;ReadPosRankSum=0.061;VQSLOD=3.6882;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:52.06:946,52,0	0/0:12,0:12:36.12:0,36,1412	0/0:23,0:23:66.20:0,66,2352	0/0:25,0:25:68.97:0,69,2268	0/0:31,0:31:93.32:0,93,3602	0/0:35,0:35:99:0,105,4098	0/0:18,0:18:51.15:0,51,1929	0/0:33,0:33:96.32:0,96,3445	0/0:32,0:32:96.30:0,96,3556	0/0:30,0:30:90.30:0,90,3576	0/0:19,0:19:57.20:0,57,2284	0/0:31,0:31:90.29:0,90,3214	0/0:37,0:37:99:0,108,4279	0/0:28,0:28:84.27:0,84,3148	0/0:24,0:24:66.23:0,66,2704	0/0:24,0:24:72.25:0,72,2876	0/0:19,0:19:57.20:0,57,2218	0/0:31,0:31:90.31:0,90,3565	0/0:19,0:19:57.19:0,57,2180	0/0:24,0:24:72.25:0,72,2921	0/0:22,0:22:66.23:0,66,2697	0/0:14,0:14:42.14:0,42,1573	0/0:25,0:25:75.26:0,75,2939	0/0:15,0:14:45.15:0,45,1749	0/0:24,0:24:72.25:0,72,2845	0/0:31,0:31:93.32:0,93,3708	0/0:38,0:38:99:0,111,4445	0/0:10,0:10:30.10:0,30,1229
chr10	82065342	.	AT	A	18615.84	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.283;DP=593;FS=0.000;HRun=4;HaplotypeScore=98.6346;InbreedingCoeff=0.9910;MQ=74.51;MQ0=0;MQRankSum=-8.122;QD=32.89;ReadPosRankSum=4.921;VQSLOD=4.6753;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:48.15:576,48,0	1/1:1,7:8:18.05:213,18,0	0/0:13,0:13:33.04:0,33,388	0/0:14,0:13:36.12:0,36,489	1/1:5,39:43:99:1387,117,0	1/1:4,15:19:48.14:576,48,0	1/1:0,19:19:57.17:684,57,0	1/1:3,24:27:72.18:848,72,0	1/1:1,19:20:57.17:683,57,0	1/1:0,26:26:78.23:924,78,0	1/1:1,33:34:93.28:1115,93,0	1/1:4,18:22:60.18:719,60,0	1/1:1,21:22:63.19:756,63,0	1/1:0,23:23:66.20:792,66,0	1/1:1,16:17:45.14:540,45,0	1/1:1,23:24:69.21:828,69,0	1/1:1,6:7:18.05:216,18,0	1/1:2,10:12:33.10:395,33,0	1/1:2,22:24:66.19:783,66,0	1/1:0,33:33:96.29:1141,96,0	1/1:0,18:18:51.16:612,51,0	1/1:1,26:27:72.22:863,72,0	1/1:0,28:28:78.24:935,78,0	1/1:2,9:11:30.05:343,30,0	1/1:1,21:22:63.19:756,63,0	1/1:0,16:16:45.14:540,45,0	1/1:1,27:28:84.24:995,84,0	1/1:5,12:17:33.10:396,33,0
chr10	82065398	.	AT	A	6870.38	PASS	AB=0.818;AC=51;AF=0.911;AN=56;BaseQRankSum=-4.051;DP=578;FS=0.857;HRun=13;HaplotypeScore=95.0120;InbreedingCoeff=0.6053;MQ=68.41;MQ0=1;MQRankSum=0.200;QD=12.61;ReadPosRankSum=2.437;VQSLOD=4.9778;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:17:31.75:0,32,177	1/1:2,1:4:5.01:28,5,0	0/0:14,1:14:8.50:0,9,73	0/1:7,1:7:16.23:16,0,20	1/1:7,27:36:58.54:422,59,0	1/1:5,17:21:18.53:299,19,0	1/1:11,9:20:41.57:296,42,0	1/1:14,20:34:44.52:321,45,0	1/1:10,12:23:40.62:286,41,0	1/1:10,16:26:58.63:419,59,0	1/1:4,18:23:29.69:219,30,0	1/1:3,15:18:47.69:348,48,0	1/1:7,23:30:62.58:460,63,0	1/1:3,15:18:35.75:263,36,0	1/1:3,17:20:41.74:306,42,0	1/1:7,13:23:41.76:279,42,0	1/1:1,3:4:8.95:66,9,0	1/1:3,15:19:43.78:312,44,0	1/1:11,11:22:38.67:280,39,0	1/1:12,19:33:52.58:378,53,0	1/1:7,3:10:8.90:66,9,0	1/1:11,11:23:26.69:197,27,0	1/1:7,16:23:26.62:197,27,0	1/1:5,21:26:1.29:336,1,0	1/1:8,16:24:44.61:326,45,0	1/1:6,15:21:12.48:255,12,0	1/1:8,17:26:29.50:368,30,0	1/1:3,5:8:17.87:129,18,0
chr10	82067617	.	A	AT	1013.95	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.323;DP=694;FS=1.370;HRun=9;HaplotypeScore=64.9474;InbreedingCoeff=0.9587;MQ=71.03;MQ0=0;MQRankSum=-0.408;QD=22.53;ReadPosRankSum=-0.831;VQSLOD=4.1131;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:24:34.37:604,34,0	0/0:16,0:16:44.99:0,45,391	0/0:8,0:8:9:0,9,78	0/0:10,0:10:14.01:0,14,110	0/0:43,0:43:99:0,114,985	0/0:22,0:22:59.99:0,60,521	1/1:4,17:21:48.13:531,48,0	0/0:39,0:39:86.92:0,87,750	0/0:22,0:22:59.98:0,60,521	0/0:37,0:37:99:0,111,961	0/0:30,0:30:86.96:0,87,755	0/0:24,0:24:65.98:0,66,573	0/0:30,0:30:65.95:0,66,573	0/0:19,0:19:56.97:0,57,491	0/0:32,0:32:89.96:0,90,776	0/0:26,0:26:65.98:0,66,573	0/0:26,0:26:62.91:0,63,537	0/0:13,0:13:32.93:0,33,279	0/0:17,0:18:47:0,47,391	0/0:45,0:45:99:0,120,1038	0/0:18,0:18:41.97:0,42,365	0/0:21,0:21:59.99:0,60,521	0/0:25,0:25:62.96:0,63,543	0/0:17,0:17:41.95:0,42,360	0/0:29,0:29:74.98:0,75,651	0/0:28,0:28:83.98:0,84,729	0/0:40,0:40:99:0,108,938	0/0:11,0:11:20.99:0,21,182
chr10	82068807	.	T	TTTTG	1188.33	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.284;DP=786;FS=0.839;HRun=0;HaplotypeScore=124.0667;InbreedingCoeff=0.9865;MQ=64.85;MQ0=0;MQRankSum=0.433;QD=36.01;ReadPosRankSum=-1.079;VQSLOD=3.6984;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,121,2000	0/0:11,0:11:24.08:0,24,389	0/0:22,0:18:18.06:0,18,277	0/0:28,0:25:35.75:0,36,544	0/0:34,0:34:72.02:0,72,1108	0/0:21,0:21:54.17:0,54,843	1/1:13,18:33:54.19:1283,54,0	0/0:44,0:44:69.23:0,69,1103	0/0:20,0:20:42.13:0,42,657	0/0:36,0:36:63.21:0,63,1014	0/0:15,0:15:27.09:0,27,438	0/0:32,0:32:78.23:0,78,1208	0/0:34,0:34:78.23:0,78,1211	0/0:27,0:27:63.20:0,63,996	0/0:27,0:27:57.18:0,57,899	0/0:34,0:34:81.28:0,81,1308	0/0:33,0:33:69.24:0,69,1118	0/0:37,0:37:56.16:0,56,1205	0/0:20,0:20:33.10:0,33,500	0/0:26,0:26:48.16:0,48,778	0/0:24,0:24:42.14:0,42,664	0/0:33,0:33:69.22:0,69,1095	0/0:33,0:33:66.23:0,66,1065	0/0:22,0:22:54.13:0,54,823	0/0:22,0:22:39.13:0,39,603	0/0:17,0:17:36.12:0,36,584	0/0:21,0:21:54.18:0,54,871	0/0:22,0:22:24.08:0,24,389
chr10	82069367	.	T	TACACAC	2997.21	PASS	AB=0.885;AC=41;AF=0.854;AN=48;BaseQRankSum=-2.510;DP=639;FS=0.000;HRun=0;HaplotypeScore=130.5816;InbreedingCoeff=0.2362;MQ=66.42;MQ0=13;MQRankSum=0.617;QD=5.98;ReadPosRankSum=-1.547;VQSLOD=2.3238;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:7.43:79,7,0	1/1:9,0:9:12.04:300,12,0	./.	./.	1/1:16,0:16:6.02:109,6,0	1/1:23,0:23:11.52:151,12,0	0/1:18,0:19:32.84:41,0,33	1/1:17,0:17:9.70:46,10,0	0/1:14,7:23:0:0,0,0	1/1:21,0:20:20.28:211,20,0	1/1:20,0:20:6.01:64,6,0	1/1:19,10:31:3.01:96,3,0	1/1:22,0:22:9.15:90,9,0	0/1:27,0:29:31.14:31,0,57	1/1:11,13:27:3.01:96,3,0	1/1:21,0:32:3.01:39,3,0	1/1:23,0:23:22.82:340,23,0	1/1:9,0:9:5.97:51,6,0	1/1:23,0:23:8.70:73,9,0	./.	1/1:33,0:33:25.25:348,25,0	0/0:18,0:19:6.90:0,7,105	1/1:24,0:24:7.22:128,7,0	./.	1/1:23,0:23:12.03:196,12,0	1/1:20,0:19:18.04:267,18,0	1/1:23,0:23:20.99:355,21,0	0/0:9,0:14:0.89:0,1,2
chr10	82070401	.	ATGTCCCCTT	A	1278.46	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.479;DP=713;FS=2.106;HRun=0;HaplotypeScore=186.9883;InbreedingCoeff=0.9993;MQ=78.66;MQ0=0;MQRankSum=-5.933;QD=60.88;ReadPosRankSum=-0.287;VQSLOD=3.6797;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,4927	0/0:17,0:17:51.18:0,51,2329	0/0:17,0:17:35.28:0,35,1315	0/0:17,0:17:48.12:0,48,1781	0/0:38,0:38:99:0,105,5031	0/0:20,0:19:60.21:0,60,2856	1/1:0,21:21:45.15:1373,45,0	0/0:35,0:35:99:0,102,3992	0/0:22,0:22:66.23:0,66,3103	0/0:27,0:27:78.27:0,78,3726	0/0:29,0:29:84.27:0,84,3865	0/0:20,0:20:60.21:0,60,2827	0/0:31,0:31:93.29:0,93,4124	0/0:25,0:25:72.25:0,72,3416	0/0:31,0:30:90.29:0,90,3852	0/0:28,0:28:81.24:0,81,3282	0/0:23,0:23:69.22:0,69,3159	0/0:16,0:16:48.16:0,48,2179	0/0:17,0:17:51.16:0,51,2195	0/0:21,0:21:63.22:0,63,2993	0/0:10,0:10:30.10:0,30,1385	0/0:27,0:27:78.25:0,78,3456	0/0:20,0:20:57.18:0,57,2629	0/0:18,0:18:54.14:0,54,2393	0/0:47,0:47:99:0,141,6705	0/0:31,0:31:90.31:0,90,4415	0/0:48,0:48:99:0,141,6055	0/0:19,0:19:57.15:0,57,2440
chr10	82070606	.	GCA	G	1896.38	PASS	AB=0.841;AC=31;AF=0.596;AN=52;BaseQRankSum=0.750;DP=597;FS=6.508;HRun=0;HaplotypeScore=81.1215;InbreedingCoeff=0.4332;MQ=66.70;MQ0=1;MQRankSum=3.631;QD=4.58;ReadPosRankSum=0.466;VQSLOD=1.6849;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,7:41:9.60:107,10,0	1/1:8,4:12:12.03:128,12,0	./.	./.	1/1:9,3:12:8.86:78,9,0	1/1:7,2:11:8.69:60,9,0	1/1:24,7:31:12.60:113,13,0	0/0:19,0:19:10.09:0,10,59	1/1:19,7:26:12.03:129,12,0	1/1:11,0:11:2.99:24,3,0	0/1:9,0:10:8.56:9,0,38	1/1:15,11:27:25.69:269,26,0	0/0:11,0:23:11.74:0,12,104	0/0:13,0:13:9.88:0,10,93	0/1:27,6:35:20.65:146,0,21	1/1:16,7:23:20.79:205,21,0	0/1:28,14:44:51.07:334,0,51	1/1:16,1:22:7.09:49,7,0	0/0:16,0:16:12.03:0,12,154	0/1:11,0:18:1.79:2,0,9	1/1:21,8:29:6.01:65,6,0	0/0:10,0:10:7.74:0,8,89	0/0:14,0:14:2.09:0,2,51	1/1:22,9:33:8.22:148,8,0	1/1:15,9:25:3.75:196,4,0	0/0:7,0:7:3.01:0,3,41	0/0:11,0:19:8.50:0,8,84	0/1:2,0:3:8.19:8,0,12
chr10	82071590	.	A	AAG	106.66	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.373;DP=450;FS=1.751;HRun=0;HaplotypeScore=118.7950;InbreedingCoeff=0.9062;MQ=72.21;MQ0=0;MQRankSum=-0.574;QD=13.33;ReadPosRankSum=-1.314;VQSLOD=3.4931;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.16:0,54,797	0/0:9,0:9:27.01:0,27,309	0/0:20,0:12:30.06:0,30,408	0/0:18,0:9:16.84:0,17,164	0/0:26,0:25:78.09:0,78,994	0/0:21,0:21:63.13:0,63,828	1/1:4,4:8:17.72:197,18,0	0/0:37,0:37:99:0,106,1188	0/0:10,0:10:24.05:0,24,303	0/0:22,0:22:64.20:0,64,802	0/0:13,0:13:37.90:0,38,477	0/0:13,0:13:32.96:0,33,390	0/0:9,0:9:23.97:0,24,283	0/0:14,0:14:38.64:0,39,533	0/0:11,0:11:27.09:0,27,383	0/0:11,0:11:30.55:0,31,408	0/0:36,0:36:99:0,106,1372	0/0:26,0:26:57.14:0,57,752	0/0:13,0:13:39.09:0,39,488	0/0:13,0:13:39.01:0,39,401	0/0:8,0:8:18.06:0,18,255	0/0:10,0:10:20.79:0,21,274	0/0:14,0:14:32.78:0,33,377	0/0:7,0:7:21.02:0,21,240	0/0:18,0:18:44.65:0,45,595	0/0:21,0:21:63.12:0,63,833	0/0:19,0:19:56.96:0,57,739	0/0:4,0:4:9.03:0,9,128
chr10	82072539	.	A	AT	284.27	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-4.689;DP=600;FS=10.458;HRun=3;HaplotypeScore=171.4076;InbreedingCoeff=0.6676;MQ=75.85;MQ0=0;MQRankSum=-0.072;QD=10.93;ReadPosRankSum=-2.646;VQSLOD=0.2989;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.27:0,87,1041	0/0:7,0:7:13.32:0,13,43	0/0:12,0:12:17.14:0,17,187	0/1:12,0:12:4.71:5,0,134	0/0:33,0:33:62.14:0,62,230	0/0:33,0:33:51.94:0,52,173	1/1:1,13:14:27.09:377,27,0	0/0:26,0:26:49.88:0,50,160	0/0:23,0:23:49.52:0,50,165	0/0:29,0:29:65.46:0,65,235	0/0:18,0:18:38.74:0,39,136	0/0:24,0:24:44.98:0,45,149	0/0:20,0:20:35.67:0,36,116	0/0:23,0:23:44.40:0,44,145	0/0:25,0:25:51.37:0,51,168	0/0:28,0:28:54.77:0,55,184	0/0:23,0:23:43.48:0,43,152	0/0:21,0:20:38.87:0,39,131	0/0:34,0:34:67.94:0,68,255	0/0:27,0:27:59.90:0,60,223	0/0:8,0:8:17.76:0,18,58	0/0:19,0:19:37.77:0,38,147	0/0:16,0:16:29.14:0,29,96	0/0:9,0:9:18.04:0,18,60	0/0:23,0:23:44.40:0,44,144	0/0:27,0:27:60.79:0,61,233	0/0:30,0:30:51.49:0,51,170	0/0:6,0:6:11.10:0,11,37
chr10	82072541	.	TTA	T	21815.42	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=3.142;DP=590;FS=7.663;HRun=0;HaplotypeScore=103.0958;InbreedingCoeff=0.9911;MQ=75.59;MQ0=0;MQRankSum=-3.826;QD=41.79;ReadPosRankSum=2.433;VQSLOD=6.6527;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.30:0,90,1776	1/1:0,7:7:18.06:292,18,0	0/0:12,0:12:23.23:0,23,414	0/0:11,0:11:25.84:0,26,378	1/1:0,31:31:84.06:1241,84,0	1/1:0,33:33:75.25:1188,75,0	0/0:15,0:15:33.08:0,33,349	1/1:0,26:26:75.20:1155,75,0	1/1:0,22:22:66.23:1062,66,0	1/1:0,29:29:84.25:1290,84,0	1/1:0,17:17:51.09:792,51,0	1/1:0,26:26:60.20:967,60,0	1/1:0,20:20:48.16:777,48,0	1/1:0,24:24:60.20:972,60,0	1/1:0,24:24:69.24:1115,69,0	1/1:0,26:26:72.25:1153,72,0	1/1:0,22:22:57.15:888,57,0	1/1:0,20:19:51.17:817,51,0	1/1:0,32:32:93.22:1341,93,0	1/1:0,27:27:80.99:1187,81,0	1/1:0,9:9:24.08:389,24,0	1/1:0,20:20:47.99:682,48,0	1/1:0,14:15:39.12:607,39,0	1/1:0,8:8:24.08:387,24,0	1/1:0,22:22:60.20:972,60,0	1/1:0,27:27:81.19:1187,81,0	1/1:0,29:29:69.24:1114,69,0	1/1:0,6:6:15.05:243,15,0
chr10	82072730	.	T	TATTCATTC	26252.94	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-1.280;DP=738;FS=0.000;HRun=0;HaplotypeScore=169.3649;InbreedingCoeff=0.8256;MQ=59.10;MQ0=6;MQRankSum=-3.074;QD=38.89;ReadPosRankSum=0.344;VQSLOD=4.3630;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:30:42.14:0,42,1015	1/1:6,8:15:27.09:1020,27,0	0/0:21,0:15:3.53:0,4,74	0/0:11,0:10:9.03:0,9,183	1/1:16,19:39:63.20:2283,63,0	1/1:16,19:36:72.25:2814,72,0	1/1:11,4:18:9.03:369,9,0	1/1:26,0:30:33.07:514,33,0	1/1:12,11:25:30.10:1227,30,0	1/1:27,13:40:66.22:2436,66,0	1/1:10,6:16:21.07:860,21,0	1/1:23,21:45:57.20:2275,57,0	1/1:10,0:30:50.83:408,51,0	1/1:13,0:25:32.43:254,32,0	1/1:15,16:34:51.18:2045,51,0	1/1:19,10:30:42.14:1557,42,0	1/1:15,5:21:12.04:478,12,0	1/1:10,5:18:12.04:407,12,0	1/1:12,0:16:8.98:73,9,0	1/1:7,0:30:62.89:536,63,0	1/1:8,1:9:9.03:249,9,0	1/1:8,0:24:41.51:328,42,0	1/1:17,18:41:63.20:2273,63,0	1/1:7,6:14:21.07:860,21,0	1/1:15,15:31:48.16:1867,48,0	1/1:16,0:39:68.91:632,69,0	1/1:13,0:37:47.89:391,48,0	1/1:1,0:6:11.98:98,12,0
chr10	82072942	.	AT	A	14332.43	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=8.394;DP=713;FS=3.228;HRun=9;HaplotypeScore=112.1806;InbreedingCoeff=0.9962;MQ=79.23;MQ0=0;MQRankSum=-5.180;QD=23.30;ReadPosRankSum=2.717;VQSLOD=4.5475;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,1:45:98.89:0,99,1382	1/1:3,12:15:36.01:330,36,0	0/0:20,0:20:34.34:0,34,395	0/0:16,0:16:35.66:0,36,369	1/1:4,31:35:90.03:823,90,0	1/1:2,19:21:51.03:467,51,0	0/0:17,0:17:42.12:0,42,485	1/1:3,26:29:75.02:685,75,0	1/1:1,23:24:63.03:577,63,0	1/1:2,26:28:78.04:714,78,0	1/1:2,24:26:63.02:577,63,0	1/1:4,23:27:63.03:576,63,0	1/1:4,36:40:99:988,108,0	1/1:3,21:24:57.02:521,57,0	1/1:4,29:34:83.08:747,83,0	1/1:2,20:22:60.03:549,60,0	1/1:2,26:28:72.04:659,72,0	1/1:2,18:20:51.03:467,51,0	1/1:5,24:29:75.03:686,75,0	1/1:2,27:29:75.03:686,75,0	1/1:2,16:18:48.01:439,48,0	1/1:3,25:28:72.04:659,72,0	1/1:6,20:27:25.41:467,25,0	1/1:3,24:27:71.07:637,71,0	1/1:3,22:25:66.03:604,66,0	1/1:3,16:19:16.41:404,16,0	1/1:0,25:25:72.04:659,72,0	1/1:0,15:15:45.02:412,45,0
chr10	82073356	.	T	TG	12376.67	PASS	AB=0.630;AC=47;AF=0.839;AN=56;BaseQRankSum=5.298;DP=683;FS=1.581;HRun=1;HaplotypeScore=117.6830;InbreedingCoeff=0.5934;MQ=88.87;MQ0=2;MQRankSum=-7.233;QD=21.68;ReadPosRankSum=6.638;VQSLOD=4.9518;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1611	1/1:1,6:7:11.92:133,12,0	0/0:35,0:35:99:0,99,1314	0/0:38,0:38:99:0,103,1284	1/1:5,11:17:12.80:321,13,0	1/1:2,18:20:17.34:463,17,0	0/1:6,20:26:13.52:389,0,14	0/1:14,8:21:6.55:231,0,7	1/1:2,19:22:30.75:602,31,0	1/1:3,26:29:41.39:589,41,0	1/1:3,16:19:23.68:410,24,0	1/1:7,19:27:2.06:568,2,0	1/1:12,18:30:29.40:679,29,0	1/1:3,22:25:68.20:762,68,0	1/1:5,34:40:62.23:881,62,0	1/1:5,26:32:28.42:704,28,0	1/1:7,13:20:33.24:471,33,0	1/1:10,17:29:57.47:631,57,0	0/1:5,11:16:2.32:295,0,2	1/1:7,20:27:23.36:508,23,0	1/1:1,12:13:23.58:269,24,0	1/1:3,21:24:46.33:524,46,0	1/1:1,22:23:49.55:578,50,0	1/1:0,24:24:54.15:605,54,0	1/1:8,14:22:34.09:499,34,0	1/1:5,10:15:7.38:160,7,0	1/1:9,23:33:49.69:867,50,0	1/1:0,7:7:21.06:237,21,0
chr10	82073763	.	TA	T	14170.89	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=8.057;DP=598;FS=2.272;HRun=7;HaplotypeScore=90.1343;InbreedingCoeff=0.9973;MQ=77.66;MQ0=0;MQRankSum=-3.886;QD=27.20;ReadPosRankSum=2.586;VQSLOD=5.3942;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.24:0,87,1063	1/1:0,9:9:27.06:275,27,0	0/0:18,0:18:36.11:0,36,444	0/0:12,0:12:18.05:0,18,216	1/1:2,21:23:54.11:550,54,0	1/1:2,18:20:54.12:551,54,0	0/0:16,0:16:48.15:0,48,597	1/1:3,30:33:87.11:851,87,0	1/1:3,19:22:54.12:551,54,0	1/1:4,21:25:63.14:642,63,0	1/1:2,21:23:60.13:612,60,0	1/1:5,21:26:63.14:643,63,0	1/1:4,16:20:54.12:551,54,0	1/1:1,27:28:78.18:795,78,0	1/1:1,23:24:69.16:704,69,0	1/1:2,12:14:39.07:391,39,0	1/1:1,21:22:63.14:643,63,0	1/1:3,15:18:48.07:478,48,0	1/1:2,18:20:54.12:551,54,0	1/1:8,23:31:78.17:795,78,0	1/1:5,15:20:45.10:459,45,0	1/1:1,27:28:78.18:796,78,0	1/1:2,13:15:42.09:428,42,0	1/1:0,15:15:39.09:398,39,0	1/1:1,19:20:54.12:551,54,0	1/1:1,23:24:69.16:704,69,0	1/1:0,28:28:84.19:857,84,0	1/1:0,13:13:39.09:398,39,0
chr10	82073810	.	T	TAAAC	28190.79	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=4.168;DP=667;FS=4.769;HRun=0;HaplotypeScore=147.8388;InbreedingCoeff=0.9981;MQ=70.46;MQ0=0;MQRankSum=-7.386;QD=49.46;ReadPosRankSum=4.238;VQSLOD=5.6930;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:41.59:0,42,689	1/1:5,10:15:45.14:969,45,0	0/0:22,0:21:42.14:0,42,641	0/0:30,0:29:49.37:0,49,744	1/1:12,18:30:57.19:1267,57,0	1/1:3,21:24:72.25:1737,72,0	0/0:23,0:23:42.14:0,42,687	1/1:40,13:52:72.22:1554,72,0	1/1:8,10:18:39.13:909,39,0	1/1:6,23:29:72.25:1773,72,0	1/1:9,15:24:45.15:1021,45,0	1/1:9,13:22:51.16:1134,51,0	1/1:9,19:29:60.21:1474,60,0	1/1:11,11:22:45.15:1067,45,0	1/1:11,18:29:63.22:1493,63,0	1/1:3,12:15:39.13:944,39,0	1/1:6,10:16:36.12:832,36,0	1/1:4,12:16:42.06:927,42,0	1/1:17,14:34:66.21:1439,66,0	1/1:5,26:32:84.27:1908,84,0	1/1:7,9:16:27.08:617,27,0	1/1:10,19:29:69.21:1561,69,0	1/1:6,14:21:42.07:1034,42,0	1/1:4,9:12:27.09:632,27,0	1/1:6,9:15:33.11:756,33,0	1/1:12,22:35:78.27:1849,78,0	1/1:14,10:25:36.11:835,36,0	1/1:3,5:8:21.05:460,21,0
chr10	82073999	.	CAGA	C	315.76	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.278;DP=630;FS=0.000;HRun=0;HaplotypeScore=82.3896;InbreedingCoeff=0.9677;MQ=84.39;MQ0=0;MQRankSum=-2.727;QD=24.29;ReadPosRankSum=-0.047;VQSLOD=3.3582;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.24:0,69,1588	0/0:4,0:4:12.04:0,12,277	0/0:25,0:25:72.19:0,72,1480	0/0:14,0:14:42.14:0,42,865	0/0:28,0:28:84.29:0,84,1907	0/0:25,0:25:75.26:0,75,1718	1/1:3,10:13:24.08:409,24,0	0/0:27,0:27:81.28:0,81,1867	0/0:24,0:24:72.25:0,72,1659	0/0:31,0:31:93.31:0,93,2101	0/0:30,0:30:90.31:0,90,2069	0/0:19,0:19:54.18:0,54,1193	0/0:22,0:22:66.23:0,66,1491	0/0:16,0:16:48.15:0,48,1061	0/0:23,0:23:66.23:0,66,1519	0/0:15,0:15:45.15:0,45,1015	0/0:30,0:30:87.24:0,87,1902	0/0:25,0:25:72.25:0,72,1660	0/0:14,0:14:39.13:0,39,854	0/0:34,0:34:99:0,99,2280	0/0:22,0:22:63.22:0,63,1429	0/0:22,0:22:66.18:0,66,1470	0/0:31,0:31:90.30:0,90,2008	0/0:14,0:14:42.14:0,42,967	0/0:27,0:27:75.26:0,75,1727	0/0:34,0:34:99:0,99,2241	0/0:26,0:25:75.24:0,75,1685	0/0:10,0:10:30.06:0,30,599
chr10	82074126	.	A	ATT	716.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.603;DP=621;FS=2.264;HRun=1;HaplotypeScore=71.7747;InbreedingCoeff=0.9992;MQ=87.92;MQ0=0;MQRankSum=-2.138;QD=44.80;ReadPosRankSum=-0.084;VQSLOD=3.6366;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1649	0/0:19,0:19:57.19:0,57,873	0/0:20,0:20:57.12:0,57,819	0/0:25,0:25:62.79:0,63,890	0/0:32,0:32:96.32:0,96,1450	0/0:24,0:24:72.21:0,72,1055	1/1:1,15:16:42.14:812,42,0	0/0:35,0:35:99:0,99,1514	0/0:27,0:27:78.25:0,78,1174	0/0:27,0:27:78.26:0,78,1186	0/0:20,0:20:60.19:0,60,898	0/0:22,0:22:66.22:0,66,1010	0/0:18,0:18:54.17:0,54,803	0/0:25,0:25:75.25:0,75,1146	0/0:30,0:30:87.30:0,87,1331	0/0:24,0:24:72.23:0,72,1081	0/0:14,0:14:36.10:0,36,528	0/0:13,0:13:39.13:0,39,597	0/0:18,0:18:51.15:0,51,758	0/0:25,0:25:66.22:0,66,1011	0/0:16,0:16:45.15:0,45,687	0/0:15,0:15:42.14:0,42,643	0/0:21,0:21:63.21:0,63,964	0/0:15,0:15:45.15:0,45,689	0/0:23,0:23:66.22:0,66,1010	0/0:19,0:19:54.17:0,54,801	0/0:31,0:31:90.31:0,90,1377	0/0:11,0:11:30.10:0,30,459
chr10	82074380	.	TA	T	24752.21	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.410;DP=770;FS=9.655;HRun=2;HaplotypeScore=84.0387;InbreedingCoeff=0.9992;MQ=84.21;MQ0=0;MQRankSum=-7.907;QD=36.40;ReadPosRankSum=6.200;VQSLOD=4.5610;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1776	1/1:0,8:8:24.08:310,24,0	0/0:22,0:22:63.12:0,63,878	0/0:27,0:27:81.02:0,81,1089	1/1:0,34:34:96.28:1227,96,0	1/1:0,36:36:99:1285,99,0	1/1:0,29:29:87.28:1129,87,0	1/1:1,40:41:99:1477,117,0	1/1:0,27:27:75.24:974,75,0	1/1:1,36:37:99:1389,111,0	1/1:0,30:30:81.22:1032,81,0	1/1:0,32:32:93.30:1207,93,0	1/1:0,25:25:72.23:935,72,0	1/1:0,34:34:96.31:1246,96,0	1/1:0,27:27:75.24:973,75,0	1/1:0,37:37:99:1441,111,0	1/1:1,27:28:75.24:971,75,0	1/1:0,14:14:36.12:467,36,0	1/1:0,23:23:69.20:878,69,0	1/1:0,26:26:75.21:955,75,0	1/1:0,28:28:75.24:973,75,0	1/1:0,22:22:63.20:818,63,0	1/1:0,17:17:51.17:662,51,0	1/1:0,17:17:51.17:662,51,0	1/1:0,36:36:99:1324,102,0	1/1:0,24:24:72.19:901,72,0	1/1:0,32:32:78.25:1012,78,0	1/1:0,16:16:39.13:506,39,0
chr10	82075010	.	GT	G	800.99	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.718;DP=831;FS=1.719;HRun=2;HaplotypeScore=76.5654;InbreedingCoeff=0.9988;MQ=84.15;MQ0=0;MQRankSum=-0.252;QD=28.61;ReadPosRankSum=-0.918;VQSLOD=3.0887;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,153,2149	0/0:17,0:17:51.15:0,51,741	0/0:29,0:29:84.21:0,84,1142	0/0:20,0:20:57.19:0,57,841	0/0:32,0:32:96.32:0,96,1409	0/0:18,0:18:51.16:0,51,744	1/1:1,27:28:69.22:896,69,0	0/0:32,0:32:93.32:0,93,1392	0/0:36,0:36:99:0,108,1599	0/0:38,0:38:99:0,114,1708	0/0:33,0:33:96.33:0,96,1436	0/0:31,0:31:87.29:0,87,1303	0/0:33,0:33:99:0,99,1484	0/0:37,0:37:99:0,111,1661	0/0:24,0:24:72.24:0,72,1078	0/0:37,0:37:99:0,111,1641	0/0:26,0:26:78.25:0,78,1149	0/0:13,0:13:36.12:0,36,539	0/0:24,0:24:72.24:0,72,1079	0/0:41,0:41:99:0,123,1814	0/0:32,0:32:96.31:0,96,1416	0/0:29,0:29:87.29:0,87,1304	0/0:32,0:32:96.33:0,96,1435	0/0:27,0:27:81.27:0,81,1214	0/0:22,0:22:66.22:0,66,988	0/0:32,0:32:93.30:0,93,1356	0/0:48,0:48:99:0,144,2153	0/0:9,0:9:27.05:0,27,343
chr10	82076002	.	G	GCAGA	36992.64	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-12.394;DP=703;FS=1.877;HRun=0;HaplotypeScore=98.5181;InbreedingCoeff=0.9398;MQ=87.66;MQ0=1;MQRankSum=-9.630;QD=61.35;ReadPosRankSum=5.391;VQSLOD=6.2040;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,2514	1/1:1,13:16:30.10:802,30,0	0/0:29,0:29:81.27:0,81,1505	0/0:26,0:26:65.38:0,65,1127	1/1:3,18:22:42.14:1138,42,0	1/1:1,21:22:57.20:1552,57,0	1/1:2,24:31:54.18:1474,54,0	1/1:3,21:27:75.25:1838,75,0	1/1:1,28:29:75.26:2050,75,0	1/1:2,27:29:87.30:2295,87,0	1/1:2,11:16:27.09:726,27,0	1/1:5,20:25:63.22:1708,63,0	1/1:3,27:30:69.24:1889,69,0	1/1:1,31:33:81.28:2209,81,0	1/1:1,19:22:54.19:1478,54,0	1/1:0,21:21:57.20:1557,57,0	1/1:2,26:29:63.22:1715,63,0	1/1:1,13:17:33.11:895,33,0	1/1:6,25:32:89.89:2073,90,0	1/1:3,11:14:33.11:903,33,0	1/1:3,43:49:99:2875,105,0	1/1:2,12:14:33.11:901,33,0	1/1:0,16:18:36.09:985,36,0	1/1:2,32:39:69.18:1827,69,0	1/1:0,18:17:42.14:1150,42,0	1/1:2,19:22:60.21:1541,60,0	1/1:3,17:21:51.17:1331,51,0	1/1:0,1:1:3.01:82,3,0
chr10	82076003	.	C	CAG	12427.72	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=12.090;DP=665;FS=1.812;HRun=0;HaplotypeScore=156.9456;InbreedingCoeff=0.9398;MQ=89.89;MQ0=1;MQRankSum=-9.881;QD=22.03;ReadPosRankSum=7.024;VQSLOD=5.0979;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,2016	1/1:12,0:12:29.88:284,30,0	0/0:30,0:30:81.27:0,81,1221	0/0:26,0:26:65.34:0,65,918	1/1:20,0:20:41.93:383,42,0	1/1:22,0:21:57.04:528,57,0	1/1:28,0:28:54.06:509,54,0	1/1:24,0:24:39.88:464,40,0	1/1:27,0:27:75.09:704,75,0	1/1:30,0:30:73.87:818,74,0	1/1:14,0:14:26.97:242,27,0	1/1:25,0:25:43.05:558,43,0	1/1:29,0:28:51.10:627,51,0	1/1:32,0:32:81.10:760,81,0	1/1:19,0:19:54.06:507,54,0	1/1:22,0:21:60.07:561,60,0	1/1:27,1:27:63.03:585,63,0	1/1:15,0:15:33:301,33,0	1/1:30,0:28:43.74:590,44,0	1/1:15,1:16:33.04:313,33,0	1/1:48,0:48:99:986,106,0	1/1:13,2:15:33.05:323,33,0	1/1:16,0:16:36.04:338,36,0	1/1:35,0:35:66.52:590,67,0	1/1:16,0:15:42.05:394,42,0	1/1:20,0:20:55.07:576,55,0	1/1:19,1:20:48.02:461,48,0	1/1:1,0:1:3:28,3,0
chr10	82076128	.	G	GTC	14694.56	PASS	AB=0.654;AC=44;AF=0.786;AN=56;BaseQRankSum=-0.103;DP=833;FS=14.102;HRun=0;HaplotypeScore=135.7560;InbreedingCoeff=0.1790;MQ=73.30;MQ0=14;MQRankSum=2.248;QD=20.81;ReadPosRankSum=3.879;VQSLOD=4.9038;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:99:0,120,1402	1/1:0,8:8:9.03:145,9,0	0/0:52,0:31:0.39:0,0,93	0/1:83,0:34:28.66:29,0,80	0/1:9,12:21:92.78:306,0,93	0/1:5,15:20:12.31:315,0,12	0/0:24,0:23:5.17:0,5,71	1/1:11,12:23:1.02:461,1,0	1/1:10,17:26:3.13:545,3,0	1/1:4,18:22:14.81:712,15,0	1/1:2,9:11:15.05:242,15,0	1/1:4,20:24:10.32:461,10,0	1/1:5,28:33:52:1044,52,0	1/1:7,33:40:35.86:1076,36,0	1/1:9,31:40:29.83:980,30,0	1/1:6,24:30:14.78:738,15,0	1/1:5,35:39:2.48:1040,2,0	1/1:5,20:25:45.15:726,45,0	1/1:19,8:26:45.11:640,45,0	0/1:4,11:15:15.09:256,0,15	1/1:11,39:50:2.47:1041,2,0	0/1:6,13:19:73.14:368,0,73	1/1:5,13:18:27.09:434,27,0	0/1:9,41:50:0.54:993,0,1	1/1:6,10:16:18.06:291,18,0	1/1:9,25:33:75.24:1140,75,0	1/1:7,13:20:33.11:520,33,0	1/1:2,7:9:12.04:194,12,0
chr10	82076155	.	TCGTGCGCGCGCG	T	143.44	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.631;DP=733;FS=0.000;HRun=0;HaplotypeScore=304.4836;InbreedingCoeff=0.8781;MQ=75.49;MQ0=13;MQRankSum=2.157;QD=8.44;ReadPosRankSum=-1.003;VQSLOD=1.5896;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:99:0,126,6795	0/0:6,0:6:12.04:0,12,670	0/0:31,0:13:23.06:0,23,347	0/0:59,0:35:22.26:0,22,476	0/0:19,0:19:54.17:0,54,2716	0/0:17,0:17:39.13:0,39,2050	1/1:8,9:16:7.84:226,8,0	0/0:33,0:33:99:0,99,4655	0/0:26,0:26:66.23:0,66,3172	0/0:26,0:26:69.23:0,69,3353	0/0:15,0:15:33.01:0,33,1764	0/0:18,0:18:30.10:0,30,1467	0/0:35,0:35:87.29:0,87,3921	0/0:37,0:37:81.27:0,81,4071	0/0:31,0:31:78.27:0,78,3654	0/0:24,0:24:54.14:0,54,2392	0/0:43,0:42:99:0,103,5088	0/0:21,0:21:57.20:0,57,2515	0/0:24,0:23:63.20:0,63,2784	0/0:16,0:16:39:0,39,1842	0/0:46,0:46:99:0,102,4612	0/0:16,0:15:35.97:0,36,1785	0/0:14,0:14:33.11:0,33,1527	0/0:45,0:44:84.12:0,84,4230	0/0:10,0:10:21.07:0,21,1082	0/0:24,0:23:69.23:0,69,3384	0/0:19,0:19:48.16:0,48,2242	0/0:10,0:10:21.07:0,21,1134
chr10	82076504	.	A	AAACTG	1326.61	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.817;DP=675;FS=13.152;HRun=0;HaplotypeScore=120.6961;InbreedingCoeff=0.9954;MQ=77.25;MQ0=0;MQRankSum=-6.981;QD=55.28;ReadPosRankSum=-2.281;VQSLOD=3.1984;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,2612	0/0:11,0:11:33.09:0,33,644	0/0:17,0:17:45.01:0,45,836	0/0:20,0:19:45.13:0,45,789	0/0:32,0:32:87.30:0,87,1784	0/0:29,0:29:81.23:0,81,1598	1/1:6,16:24:51.13:1421,51,0	0/0:31,0:31:78.27:0,78,1562	0/0:29,0:29:87.30:0,87,1766	0/0:21,0:21:57.19:0,57,1153	0/0:16,0:16:42.14:0,42,836	0/0:20,0:20:54.18:0,54,1080	0/0:24,0:24:60.19:0,60,1203	0/0:21,0:21:60.18:0,60,1154	0/0:33,0:33:93.32:0,93,1910	0/0:31,0:31:81.28:0,81,1642	0/0:29,0:29:78.27:0,78,1598	0/0:12,0:12:33.11:0,33,684	0/0:21,0:21:48.16:0,48,974	0/0:27,0:27:72.23:0,72,1436	0/0:20,0:20:54.19:0,54,1119	0/0:23,0:23:69.20:0,69,1302	0/0:22,0:22:63.21:0,63,1246	0/0:30,0:30:81.26:0,81,1642	0/0:19,0:19:54.19:0,54,1099	0/0:34,0:34:99:0,99,1995	0/0:28,0:28:75.25:0,75,1498	0/0:8,0:8:21.07:0,21,435
chr10	82080714	.	T	TG	2970.32	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=0.852;DP=685;FS=0.476;HRun=0;HaplotypeScore=75.9260;InbreedingCoeff=0.9994;MQ=89.96;MQ0=0;MQRankSum=-1.694;QD=41.84;ReadPosRankSum=1.600;VQSLOD=4.2991;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,1955	0/0:18,0:18:51.14:0,51,693	0/0:27,0:27:78.18:0,78,1009	0/0:25,0:25:66.12:0,66,845	0/0:14,0:14:42.12:0,42,556	0/0:18,0:18:54.17:0,54,738	0/0:23,0:23:66.21:0,66,906	0/0:40,0:40:99:0,108,1467	0/0:20,0:20:60.19:0,60,821	0/0:21,0:21:63.21:0,63,868	0/0:11,0:11:30.08:0,30,388	0/0:31,0:31:90.29:0,90,1241	1/1:0,25:25:72.25:1149,72,0	1/1:1,27:28:78.27:1245,78,0	0/0:40,0:40:99:0,117,1621	0/0:29,0:29:84.28:0,84,1172	0/0:27,0:27:81.26:0,81,1117	0/0:25,0:25:75.21:0,75,1011	0/0:24,0:24:69.23:0,69,964	0/0:21,0:21:60.12:0,60,782	0/0:37,0:37:99:0,105,1432	1/1:0,18:18:45.15:719,45,0	0/0:13,0:13:39.07:0,39,450	0/0:21,0:21:63.21:0,63,879	0/0:22,0:22:66.18:0,66,847	0/0:9,0:9:27.08:0,27,362	0/0:31,0:31:93.31:0,93,1300	0/0:19,0:19:57.19:0,57,797
chr10	82081101	.	AT	A	1597.09	PASS	AB=0.799;AC=11;AF=0.196;AN=56;BaseQRankSum=9.844;DP=556;FS=7.236;HRun=12;HaplotypeScore=59.7563;InbreedingCoeff=0.6821;MQ=67.48;MQ0=0;MQRankSum=2.243;QD=10.79;ReadPosRankSum=-0.738;VQSLOD=2.4985;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.12:0,60,607	0/0:15,0:15:39.05:0,39,386	0/0:17,0:12:14.38:0,14,166	0/0:12,0:7:0:0,0,0	0/1:18,2:21:12.38:12,0,393	0/0:22,0:22:57.09:0,57,567	0/1:4,9:14:4.50:142,0,5	1/1:6,23:29:62.66:484,63,0	0/0:22,0:22:54.07:0,54,537	0/0:24,0:24:45.08:0,45,452	0/0:15,0:15:12.82:0,13,284	0/0:18,0:18:36.54:0,37,367	0/0:23,1:24:29.66:0,30,461	0/0:14,0:14:39.07:0,39,391	0/0:15,0:14:23.27:0,23,387	0/0:15,0:15:39.08:0,39,396	0/0:20,0:20:56.92:0,57,543	0/0:20,0:20:42.04:0,42,406	1/1:7,14:21:21.98:300,22,0	1/1:3,17:21:49.83:377,50,0	0/0:16,0:16:42.08:0,42,426	0/1:16,2:18:10.19:10,0,313	0/0:28,0:28:78.13:0,78,779	0/0:18,0:18:36.06:0,36,359	0/0:27,1:29:68.96:0,69,677	0/0:30,0:30:52.01:0,52,708	1/1:4,20:24:56.43:441,56,0	0/0:12,0:12:27.04:0,27,268
chr10	82081875	.	C	CTAACCAAAGAA	71330.44	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-3.282;DP=852;FS=1.077;HRun=0;HaplotypeScore=240.2796;InbreedingCoeff=0.9618;MQ=78.03;MQ0=0;MQRankSum=-17.525;QD=107.91;ReadPosRankSum=-2.416;VQSLOD=4.4934;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,108,3612	1/1:6,5:11:18.06:833,18,0	0/0:32,0:32:54.44:0,54,1562	0/0:26,0:26:18.75:0,19,1139	1/1:14,20:34:90.30:3655,90,0	1/1:9,9:20:48.16:2161,48,0	1/1:11,15:29:63.22:3047,63,0	1/1:47,12:61:99:6494,151,0	1/1:14,17:31:81.24:4066,81,0	1/1:20,24:45:99:5788,114,0	1/1:9,17:26:57.15:2569,57,0	1/1:15,13:31:63.22:2785,63,0	0/0:34,0:34:90.27:0,90,2820	0/0:32,0:32:81.25:0,81,2505	1/1:21,23:48:93.32:4601,93,0	1/1:12,26:38:93.32:5018,93,0	1/1:10,12:24:48.16:2432,48,0	1/1:7,7:14:24.55:1321,25,0	1/1:26,4:31:78.22:3075,78,0	1/1:12,17:31:93.25:3984,93,0	1/1:12,3:15:27:804,27,0	0/0:24,0:24:63.22:0,63,1988	1/1:10,13:25:54.01:2417,54,0	1/1:12,8:21:36.59:1378,37,0	1/1:12,24:39:90.31:4563,90,0	1/1:23,15:40:99:5094,108,0	1/1:14,22:37:99:5080,99,0	1/1:3,2:9:3.01:167,3,0
chr10	82082656	.	T	TA	10489.31	PASS	AB=0.773;AC=42;AF=0.750;AN=56;BaseQRankSum=-8.877;DP=644;FS=0.000;HRun=10;HaplotypeScore=77.2186;InbreedingCoeff=0.5190;MQ=84.65;MQ0=0;MQRankSum=-2.002;QD=19.35;ReadPosRankSum=0.322;VQSLOD=5.5121;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:74.82:0,75,608	1/1:1,4:5:3.01:32,3,0	0/1:27,1:29:29.43:29,0,159	0/1:17,0:17:26.41:26,0,120	1/1:9,10:19:34.87:342,35,0	1/1:5,17:22:1.84:431,2,0	0/0:23,0:24:27.26:0,27,418	1/1:8,21:30:38.37:597,38,0	1/1:2,21:23:57.14:608,57,0	1/1:6,28:35:65.35:856,65,0	1/1:4,15:19:17.39:366,17,0	1/1:1,16:19:44.78:444,45,0	0/0:14,0:14:35.95:0,36,295	0/0:20,0:21:52.96:0,53,425	1/1:6,19:25:26.48:487,26,0	0/1:7,30:37:22.80:597,0,23	1/1:14,21:35:23.35:648,23,0	1/1:1,12:13:8.44:295,8,0	1/1:3,17:21:53.79:533,54,0	1/1:7,17:24:45.11:480,45,0	1/1:5,25:30:63.16:672,63,0	0/0:12,1:13:0.95:0,1,214	1/1:3,9:12:27.06:283,27,0	1/1:3,26:29:75.19:800,75,0	1/1:7,19:27:22.64:481,23,0	0/1:7,21:28:4.79:561,0,5	1/1:4,25:29:16.84:579,17,0	1/1:1,11:12:23.73:340,24,0
chr10	82083037	.	CTTCTTT	C	3195.76	PASS	AB=0.823;AC=32;AF=0.593;AN=54;BaseQRankSum=2.304;DP=239;FS=16.573;HRun=0;HaplotypeScore=62.0977;InbreedingCoeff=0.1281;MQ=51.84;MQ0=1;MQRankSum=-3.957;QD=17.66;ReadPosRankSum=-4.032;VQSLOD=0.2582;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:13,1:14:31.06:31,0,762	1/1:0,5:5:12:197,12,0	0/0:17,0:7:17.51:0,18,386	0/0:9,0:8:20.94:0,21,581	1/1:9,1:10:5.95:73,6,0	0/1:7,1:8:42.08:157,0,42	1/1:6,4:10:17.93:269,18,0	0/1:6,2:8:52.47:209,0,52	1/1:7,1:8:14.96:183,15,0	0/1:6,2:7:19.96:183,0,20	0/1:11,4:15:19.86:133,0,20	0/1:3,1:4:19.87:122,0,20	0/0:11,0:11:33.10:0,33,901	0/0:6,0:6:18.05:0,18,343	1/1:9,4:13:0.68:341,1,0	0/1:8,3:11:32.12:299,0,32	1/1:4,2:6:14.44:165,14,0	0/1:2,1:3:9.14:59,0,9	0/1:4,0:4:28.27:38,0,28	1/1:3,4:7:5.69:66,6,0	./.	0/0:7,0:6:15.02:0,15,315	0/1:6,5:11:24.21:105,0,24	1/1:9,2:11:15.98:217,16,0	1/1:11,0:11:21.72:215,22,0	1/1:4,4:8:14.17:259,14,0	1/1:0,6:6:2.95:55,3,0	0/0:3,0:3:6.90:0,7,63
chr10	82083843	.	CTCTCA	C	1258.54	PASS	AB=0.992;AC=32;AF=0.593;AN=54;BaseQRankSum=0.573;DP=274;FS=0.000;HRun=0;HaplotypeScore=69.2267;InbreedingCoeff=0.2170;MQ=29.81;MQ0=13;MQRankSum=-0.573;QD=6.36;ReadPosRankSum=0.294;VQSLOD=1.5693;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:16:0.47:0,0,1	1/1:6,0:6:2.64:28,3,0	0/0:3,0:1:3.01:0,3,44	0/0:7,0:3:6.49:0,6,84	1/1:15,0:15:3:28,3,0	0/0:12,0:12:1.01:0,1,2	1/1:5,0:3:3:28,3,0	1/1:3,0:2:3:29,3,0	0/1:12,0:12:0:0,0,0	0/1:16,0:13:55.31:157,0,55	0/0:4,0:4:0:0,0,0	1/1:9,0:9:2.64:28,3,0	1/1:4,2:5:2.63:65,3,0	1/1:9,1:10:4.92:104,5,0	1/1:15,0:14:2.64:30,3,0	1/1:18,0:17:5.22:56,5,0	1/1:8,0:7:2.04:50,2,0	0/1:6,0:4:20.99:21,0,80	1/1:6,0:5:15:153,15,0	0/1:20,1:21:0.21:0,0,2	./.	0/0:4,1:5:0:0,0,1	0/0:8,0:8:2.60:0,3,10	0/1:9,0:8:0:0,0,0	0/0:11,0:10:3.01:0,3,38	1/1:10,4:14:36.47:493,36,0	1/1:10,0:10:5.45:64,5,0	0/1:9,0:9:7.13:48,0,7
chr10	82083845	.	CTCA	C	1412.03	PASS	AB=0.942;AC=37;AF=0.685;AN=54;BaseQRankSum=2.465;DP=279;FS=0.000;HRun=0;HaplotypeScore=67.1573;InbreedingCoeff=0.2739;MQ=29.97;MQ0=14;MQRankSum=-0.854;QD=6.03;ReadPosRankSum=1.503;VQSLOD=1.7954;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:16:0:0,0,0	1/1:6,0:6:2.84:28,3,0	0/0:4,0:1:3.01:0,3,44	0/0:9,0:3:6.02:0,6,84	1/1:16,0:16:3:28,3,0	1/1:12,0:12:2.47:18,2,0	1/1:6,0:4:2.57:28,3,0	1/1:3,0:2:3:29,3,0	1/1:12,0:12:2.96:19,3,0	0/1:16,1:15:5.43:225,0,5	0/0:4,0:4:0:0,0,0	1/1:9,0:9:2.84:28,3,0	1/1:6,0:5:2.84:48,3,0	1/1:10,0:10:5.50:72,5,0	1/1:15,0:14:2.84:30,3,0	1/1:17,0:16:5.10:56,5,0	1/1:8,0:7:8.49:68,8,0	0/1:6,0:4:21.04:21,0,36	1/1:5,1:5:15:157,15,0	0/1:16,5:21:0.08:0,0,1	./.	0/0:5,0:5:0:0,0,1	0/0:8,0:8:1.25:0,1,3	0/1:9,0:8:0:0,0,0	0/0:11,0:10:2.97:0,3,20	1/1:13,1:14:38.66:466,39,0	1/1:9,0:9:11.61:98,12,0	1/1:9,0:9:14.66:113,15,0
chr10	82083847	.	C	CTCT	374.22	PASS	AB=0.967;AC=36;AF=0.667;AN=54;BaseQRankSum=-1.250;DP=279;FS=6.721;HRun=0;HaplotypeScore=72.8250;InbreedingCoeff=0.3061;MQ=31.15;MQ0=15;MQRankSum=-0.913;QD=1.69;ReadPosRankSum=-1.818;VQSLOD=0.5539;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:16:0:0,0,0	1/1:6,0:6:2.68:11,3,0	0/0:4,0:1:3.01:0,3,40	0/0:10,0:3:5.83:0,6,80	1/1:13,0:13:2.58:10,3,0	1/1:10,2:12:3.95:56,4,0	1/1:5,0:4:2.50:9,2,0	1/1:4,0:3:2.56:9,3,0	1/1:12,1:13:3.01:48,3,0	1/1:17,0:15:4.73:91,5,0	0/1:3,1:4:0:0,0,0	1/1:6,2:8:2.74:12,3,0	0/0:6,0:5:0.14:0,0,0	0/0:10,0:10:0.55:0,1,3	1/1:12,1:13:2.26:8,2,0	1/1:17,0:17:6.29:25,6,0	1/1:7,1:7:8.36:70,8,0	1/1:5,0:3:5.75:57,6,0	1/1:6,0:5:6.18:42,6,0	0/1:23,0:23:0.13:1,0,0	./.	0/1:5,0:5:0:1,0,0	1/1:6,0:6:2.50:9,2,0	0/0:9,0:8:0:0,0,0	0/1:8,0:10:0:0,0,0	0/0:15,0:15:3.15:0,3,76	1/1:9,0:9:0.64:22,1,0	0/1:9,0:9:2.79:3,0,15
chr10	82083848	.	A	ACAC	3396.69	PASS	AB=0.595;AC=40;AF=0.833;AN=48;BaseQRankSum=1.409;DP=312;FS=10.193;HRun=0;HaplotypeScore=77.3212;InbreedingCoeff=0.3708;MQ=31.78;MQ0=16;MQRankSum=-0.338;QD=14.15;ReadPosRankSum=0.564;VQSLOD=2.4382;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,0:6:3.01:64,3,0	0/0:7,0:1:3.01:0,3,55	0/0:11,0:3:6.02:0,6,94	1/1:1,0:14:2.75:30,3,0	1/1:2,0:12:3.01:37,3,0	1/1:4,0:7:5.97:86,6,0	1/1:6,0:8:15.01:241,15,0	1/1:2,0:13:3.01:38,3,0	1/1:4,0:16:37:611,37,0	./.	1/1:5,0:11:6.46:130,6,0	1/1:5,0:7:9.03:161,9,0	1/1:3,0:11:5.38:41,5,0	1/1:4,9:16:2.87:65,3,0	1/1:1,0:17:5.88:129,6,0	1/1:2,0:8:9.02:124,9,0	1/1:2,0:4:6.02:115,6,0	1/1:2,0:6:18.06:293,18,0	0/1:7,0:23:0:0,0,0	0/1:2,0:5:0:0,0,0	./.	1/1:0,0:6:3.01:67,3,0	0/0:0,0:8:0:0,0,0	./.	1/1:6,0:16:42.12:661,42,0	1/1:0,0:9:12.04:207,12,0	1/1:1,0:10:14.97:296,15,0
chr10	82084294	.	TTCTC	T	7702.58	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-0.802;DP=430;FS=1.207;HRun=0;HaplotypeScore=74.9993;InbreedingCoeff=0.6093;MQ=71.03;MQ0=5;MQRankSum=0.056;QD=22.79;ReadPosRankSum=1.239;VQSLOD=4.5667;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:48.01:0,48,764	1/1:7,0:7:15.05:196,15,0	0/0:27,0:12:22.62:0,23,412	0/0:15,0:8:11.91:0,12,87	1/1:12,17:29:51.14:670,51,0	1/1:8,2:10:9.03:145,9,0	1/1:12,0:12:9.03:122,9,0	0/1:29,0:28:39.86:302,0,40	1/1:13,0:13:39.13:646,39,0	1/1:21,3:24:57.15:872,57,0	1/1:4,14:18:42.14:555,42,0	1/1:13,1:14:33.11:514,33,0	0/0:12,0:12:29.69:0,30,459	0/0:8,0:8:16.54:0,17,211	1/1:16,0:16:45.15:731,45,0	1/1:11,0:11:15.05:227,15,0	1/1:17,1:18:38.55:613,39,0	1/1:10,1:11:7.58:107,8,0	1/1:10,0:8:3.57:173,4,0	0/1:17,0:17:10.96:270,0,11	1/1:3,0:3:3:27,3,0	0/0:11,0:11:27.05:0,27,347	1/1:6,11:17:14.83:201,15,0	1/1:1,10:11:6.02:108,6,0	1/1:20,2:21:27.08:354,27,0	1/1:21,0:20:51.11:678,51,0	0/1:21,0:21:44.75:105,0,45	1/1:4,0:4:6.02:88,6,0
chr10	82084295	.	TCTC	T	1011.50	PASS	AB=0.973;AC=25;AF=0.446;AN=56;BaseQRankSum=7.531;DP=421;FS=6.658;HRun=0;HaplotypeScore=89.3052;InbreedingCoeff=-0.0648;MQ=70.16;MQ0=5;MQRankSum=-0.245;QD=3.32;ReadPosRankSum=4.365;VQSLOD=0.7568;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.07:0,51,1042	0/1:7,0:7:6.14:6,0,59	0/0:27,0:11:33.10:0,33,614	0/0:15,0:8:18.06:0,18,279	0/1:29,0:29:34.45:34,0,122	0/1:8,0:8:25.58:29,0,26	0/1:12,0:12:9.53:10,0,61	0/1:26,0:25:16.66:17,0,361	1/1:13,0:13:36.59:178,37,0	0/1:23,1:24:32.02:160,0,32	0/1:17,0:17:30.11:30,0,45	0/1:13,1:14:42.07:96,0,42	0/0:12,0:12:36.12:0,36,740	0/0:8,0:8:24.07:0,24,416	1/1:16,0:16:40.53:196,41,0	1/1:9,0:10:11.85:58,12,0	0/1:17,1:18:4.04:118,0,4	1/1:11,0:11:7.29:36,7,0	0/1:10,0:8:32.72:33,0,82	0/1:17,0:17:12.02:12,0,313	0/0:3,0:3:8.51:0,9,80	0/0:11,0:11:33.11:0,33,597	0/1:16,0:16:6.68:7,0,124	1/1:10,1:11:5.92:39,6,0	0/1:22,0:21:22.07:30,0,22	0/1:21,0:20:16.99:88,0,17	0/0:21,0:21:16.30:0,16,379	0/1:2,1:3:12.65:13,0,31
chr10	82084299	.	TCTCTC	T	3735.57	PASS	AB=0.993;AC=32;AF=0.571;AN=56;BaseQRankSum=5.476;DP=430;FS=0.990;HRun=0;HaplotypeScore=93.5280;InbreedingCoeff=0.2140;MQ=65.71;MQ0=8;MQRankSum=-0.825;QD=11.05;ReadPosRankSum=2.205;VQSLOD=2.6590;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:50.23:0,50,1113	0/1:7,0:7:28.24:83,0,28	0/0:26,0:10:30.01:0,30,586	0/0:15,0:6:12:0,12,157	0/1:28,1:28:35.51:269,0,36	0/1:9,0:9:10.60:66,0,11	1/1:13,0:13:8.52:54,9,0	0/1:24,1:24:99:107,0,228	1/1:13,0:13:38.91:321,39,0	1/1:23,2:25:7.40:464,7,0	1/1:19,0:18:30.60:284,31,0	0/1:13,0:13:11.34:235,0,11	0/0:11,0:11:33.10:0,33,708	0/0:6,0:6:18:0,18,329	1/1:15,1:16:45.42:440,45,0	1/1:12,0:12:15.14:121,15,0	1/1:18,0:18:18.36:314,18,0	1/1:11,0:11:8.59:72,9,0	0/1:11,0:10:24.99:128,0,25	0/1:19,0:19:99:143,0,161	0/0:3,0:3:4.55:0,5,45	0/0:11,0:11:30.05:0,30,573	0/1:14,0:14:20.54:82,0,21	1/1:12,0:12:5.64:50,6,0	1/1:21,1:22:25.99:180,26,0	1/1:23,0:22:46.35:276,46,0	0/1:22,0:22:22.51:23,0,201	0/1:4,0:4:14.72:25,0,15
chr10	82084300	.	CTCTCT	C	6763.02	PASS	AB=0.903;AC=38;AF=0.679;AN=56;BaseQRankSum=-0.665;DP=435;FS=1.655;HRun=0;HaplotypeScore=83.5283;InbreedingCoeff=0.4844;MQ=65.32;MQ0=8;MQRankSum=2.552;QD=19.60;ReadPosRankSum=3.223;VQSLOD=4.6219;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:49.05:0,49,852	1/1:5,2:7:14.97:175,15,0	0/0:26,0:10:28.59:0,29,436	0/0:15,0:6:11.91:0,12,88	1/1:24,3:27:29.74:556,30,0	1/1:4,5:9:7.27:112,7,0	1/1:13,0:13:8.97:85,9,0	0/1:26,0:25:99:249,0,165	1/1:13,0:13:39.13:624,39,0	1/1:7,15:23:40.62:872,41,0	1/1:19,0:18:25.86:480,26,0	1/1:15,0:15:20.16:435,20,0	0/0:11,0:11:30.07:0,30,482	0/0:6,0:6:17.66:0,18,229	1/1:15,1:16:44.28:759,44,0	0/1:11,1:13:0.77:154,0,1	1/1:15,3:18:23.20:544,23,0	0/1:2,9:11:1.39:87,0,1	0/1:11,0:10:18.82:152,0,19	0/1:17,0:17:73.68:238,0,74	1/1:3,0:3:3:27,3,0	0/0:11,0:11:27.06:0,27,360	1/1:14,0:14:14.77:178,15,0	1/1:12,0:12:5.98:62,6,0	1/1:21,2:23:25.88:305,26,0	1/1:24,0:23:13.33:526,13,0	0/1:12,0:25:91.73:92,0,126	1/1:4,0:4:5.97:51,6,0
chr10	82084301	.	TCTC	T	8065.99	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-0.273;DP=418;FS=2.784;HRun=0;HaplotypeScore=65.2599;InbreedingCoeff=0.8220;MQ=65.51;MQ0=8;MQRankSum=-1.217;QD=24.52;ReadPosRankSum=-0.050;VQSLOD=4.5515;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:47.14:0,47,675	1/1:2,3:5:15.05:225,15,0	0/0:26,0:10:5.80:0,6,381	0/0:15,0:6:11.90:0,12,86	1/1:26,1:26:40.31:650,40,0	1/1:8,0:8:9.90:113,10,0	1/1:1,12:13:9.03:129,9,0	1/1:22,2:23:29.05:411,29,0	1/1:13,0:13:39.13:646,39,0	1/1:24,0:24:57.62:819,58,0	1/1:17,1:17:42.61:564,43,0	1/1:11,3:14:35.24:507,35,0	0/0:11,0:11:24.85:0,25,432	0/0:6,0:6:4.51:0,5,183	1/1:15,1:16:45.62:721,46,0	1/1:6,7:13:15.52:215,16,0	1/1:17,0:17:38.82:594,39,0	1/1:11,0:11:8.52:92,9,0	1/1:11,0:10:22.30:245,22,0	1/1:17,0:17:31.01:390,31,0	1/1:1,0:1:3:27,3,0	0/0:11,0:11:27.01:0,27,322	1/1:12,0:12:14.94:187,15,0	1/1:12,0:12:5.85:79,6,0	1/1:7,17:23:28.02:373,28,0	1/1:3,19:23:52.96:800,53,0	1/1:22,0:22:13.42:181,13,0	1/1:1,2:3:6.02:95,6,0
chr10	82085819	.	TAA	T	13197.42	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=1.857;DP=633;FS=7.892;HRun=11;HaplotypeScore=107.7487;InbreedingCoeff=0.9944;MQ=73.99;MQ0=2;MQRankSum=-1.674;QD=25.68;ReadPosRankSum=4.014;VQSLOD=4.3134;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:35:95.30:0,95,1392	1/1:0,7:7:21.05:224,21,0	0/0:17,0:16:23.77:0,24,327	0/0:17,0:16:33.50:0,34,426	1/1:2,34:36:92.54:953,93,0	1/1:4,30:34:87.21:926,87,0	1/1:2,19:21:51.09:543,51,0	1/1:10,29:39:88.63:885,89,0	1/1:2,11:13:33.08:351,33,0	1/1:5,22:26:62.98:658,63,0	1/1:3,17:20:47.99:478,48,0	1/1:4,15:19:36.03:383,36,0	0/0:2,0:17:29.54:0,30,267	0/0:6,0:15:36.08:0,36,431	1/1:1,21:23:59.89:619,60,0	1/1:3,23:26:63.15:671,63,0	1/1:3,32:35:87.21:926,87,0	1/1:3,7:10:21.04:223,21,0	1/1:1,15:16:42.30:474,42,0	1/1:8,26:34:75.14:787,75,0	1/1:0,22:22:57.14:607,57,0	0/0:3,0:18:44.82:0,45,440	1/1:3,16:19:39.09:415,39,0	1/1:4,24:28:69.15:734,69,0	1/1:4,18:22:51.10:543,51,0	1/1:2,28:31:86.94:904,87,0	1/1:0,25:25:69.17:734,69,0	1/1:0,7:7:15.04:160,15,0
chr10	82086062	.	A	AG	388.79	PASS	AB=0.834;AC=9;AF=0.161;AN=56;BaseQRankSum=9.214;DP=616;FS=0.520;HRun=0;HaplotypeScore=120.4449;InbreedingCoeff=-0.2071;MQ=67.08;MQ0=2;MQRankSum=-6.644;QD=1.71;ReadPosRankSum=-8.841;VQSLOD=-0.2934;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,2:28:81.13:0,81,1080	0/1:7,5:12:69.68:70,0,218	0/0:18,0:14:35.90:0,36,423	0/0:21,0:17:43.04:0,43,533	0/1:26,12:37:45.89:46,0,919	0/0:18,1:19:17.90:0,18,659	0/0:17,0:17:48.14:0,48,636	0/0:26,0:24:63.90:0,64,884	0/0:16,0:18:19.92:0,20,537	0/1:26,4:29:99:146,0,712	0/0:18,1:18:11.84:0,12,562	0/0:18,4:22:3.21:0,3,607	0/0:21,0:31:37.22:0,37,752	0/0:18,1:25:53.68:0,54,737	0/1:14,5:16:15.73:16,0,508	0/0:23,4:27:21.26:0,21,847	0/0:16,3:18:11.66:0,12,520	0/1:12,2:14:37.83:38,0,393	0/1:10,1:11:45.66:46,0,237	0/1:31,5:36:44.13:44,0,1081	0/0:4,1:5:8.12:0,8,161	0/0:19,0:19:57.18:0,57,766	0/0:25,2:27:61.26:0,61,1007	0/0:16,1:17:32.72:0,33,609	0/1:28,4:34:99:105,0,746	0/0:20,0:20:39.38:0,39,706	0/1:28,3:34:17.76:18,0,1060	0/0:9,0:8:14.55:0,15,206
chr10	82087459	.	GAC	G	128.62	PASS	AB=0.980;AC=15;AF=0.300;AN=50;BaseQRankSum=1.867;DP=464;FS=15.396;HRun=0;HaplotypeScore=105.7640;InbreedingCoeff=0.2437;MQ=54.64;MQ0=22;MQRankSum=1.530;QD=0.69;ReadPosRankSum=0.340;VQSLOD=1.2844;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,3:26:14.17:14,0,179	0/1:10,0:10:5.28:5,0,31	./.	./.	0/0:17,0:16:12.99:0,13,73	0/0:17,0:18:8.62:0,9,29	1/1:11,0:12:8.43:40,8,0	0/0:24,0:24:0.89:0,1,2	0/0:7,0:7:0:0,0,0	0/0:12,0:11:18.41:0,18,95	0/0:17,0:17:8.85:0,9,76	0/1:17,0:17:33.52:34,0,34	1/1:9,0:9:7.23:30,7,0	1/1:20,0:20:12.05:61,12,0	0/0:16,0:16:12.30:0,12,55	0/1:18,0:18:20.96:21,0,47	0/0:20,0:19:8.55:0,9,45	0/0:12,0:9:4.99:0,5,18	0/1:29,0:27:3.64:10,0,4	0/0:7,0:6:2.50:0,2,9	0/0:29,0:27:11.86:0,12,77	1/1:13,0:12:8.52:42,9,0	0/0:12,0:12:3.74:0,4,12	0/0:15,0:15:2.50:0,2,9	0/0:13,1:14:11.81:0,12,86	0/1:21,1:21:4.21:4,0,75	0/1:9,0:9:5.82:15,0,6	./.
chr10	82087499	.	CACA	C	409.56	PASS	AB=1.000;AC=8;AF=0.148;AN=54;BaseQRankSum=-0.341;DP=589;FS=3.414;HRun=0;HaplotypeScore=136.4084;InbreedingCoeff=0.6222;MQ=38.37;MQ0=73;MQRankSum=1.108;QD=3.03;ReadPosRankSum=1.369;VQSLOD=2.5954;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:72.58:0,73,1077	0/0:8,0:8:18.04:0,18,244	0/1:58,0:8:3.98:4,0,149	0/0:71,0:7:17.79:0,18,195	0/0:22,0:16:18.06:0,18,338	0/0:19,0:17:13.77:0,14,211	0/0:23,0:22:15.22:0,15,309	0/0:19,0:16:42.61:0,43,403	0/0:12,0:9:6.89:0,7,75	0/0:13,0:10:18.54:0,19,463	0/0:16,0:16:11.90:0,12,239	0/0:20,0:16:24.32:0,24,326	1/1:6,9:12:11.92:168,12,0	1/1:8,13:19:13.56:212,14,0	0/0:20,0:19:21.98:0,22,357	0/0:11,0:11:17.60:0,18,276	0/0:22,0:18:45.06:0,45,624	0/0:15,0:13:28.33:0,28,422	0/1:13,0:11:7.21:7,0,291	0/0:5,0:5:6.49:0,6,105	0/0:35,0:27:25.83:0,26,462	1/1:13,14:20:11.97:155,12,0	0/0:11,0:10:9.03:0,9,156	0/0:27,0:20:5.91:0,6,77	0/0:14,0:12:12.41:0,12,258	0/0:23,0:20:58.20:0,58,793	0/0:13,0:13:27.08:0,27,355	./.
chr10	82087504	.	ACAC	A	2566.20	PASS	AB=0.964;AC=30;AF=0.556;AN=54;BaseQRankSum=-2.051;DP=599;FS=4.419;HRun=0;HaplotypeScore=126.2207;InbreedingCoeff=0.2562;MQ=37.17;MQ0=74;MQRankSum=-2.120;QD=8.33;ReadPosRankSum=-0.037;VQSLOD=2.8329;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:66.48:0,66,960	1/1:6,1:7:12.04:164,12,0	0/0:68,0:10:29.89:0,30,334	0/0:84,0:9:18.02:0,18,210	0/1:22,0:16:5.68:7,0,6	0/1:19,0:17:5.03:55,0,5	0/0:22,0:21:26.91:0,27,396	1/1:18,0:14:24.07:305,24,0	1/1:10,1:8:0.75:34,1,0	1/1:13,0:10:2.37:83,2,0	0/1:15,0:15:15.87:19,0,16	0/1:14,5:15:14.53:246,0,15	0/1:14,0:11:28:28,0,46	0/0:20,0:18:15.77:0,16,119	0/1:19,0:18:3.44:58,0,3	0/1:10,1:10:26.64:60,0,27	1/1:24,0:20:13.06:310,13,0	1/1:14,0:12:12.93:163,13,0	0/1:14,0:12:12.74:247,0,13	1/1:5,0:5:2.79:14,3,0	1/1:33,0:26:0.90:116,1,0	0/0:29,0:21:11.82:0,12,99	0/0:11,1:11:1.02:0,1,3	0/0:23,1:17:1.75:0,2,5	1/1:15,0:13:2.68:57,3,0	1/1:22,0:19:33.54:446,34,0	1/1:12,1:13:26.82:325,27,0	./.
chr10	82087506	.	AC	A	3896.80	PASS	AB=0.674;AC=38;AF=0.679;AN=56;BaseQRankSum=-0.585;DP=603;FS=7.357;HRun=2;HaplotypeScore=110.8885;InbreedingCoeff=0.5191;MQ=37.01;MQ0=73;MQRankSum=0.320;QD=11.92;ReadPosRankSum=2.592;VQSLOD=2.1435;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:65.80:0,66,866	1/1:3,3:6:11.97:131,12,0	0/0:72,2:11:29.89:0,30,334	0/0:87,3:11:21.03:0,21,250	1/1:7,13:15:11.66:155,12,0	1/1:7,12:17:1.26:99,1,0	0/0:22,0:21:39.69:0,40,448	1/1:7,10:14:8.31:280,8,0	0/1:4,6:7:0.50:33,0,0	1/1:7,5:10:17.12:241,17,0	1/1:9,7:16:4.55:29,5,0	0/1:13,8:17:23.22:136,0,23	0/0:14,0:11:4.65:0,5,82	0/0:20,0:18:15.82:0,16,148	1/1:6,12:17:11.32:176,11,0	0/1:8,5:12:31.27:135,0,31	1/1:9,13:19:44.88:548,45,0	1/1:3,10:12:19.61:233,20,0	0/1:6,9:13:10.64:270,0,11	1/1:1,3:4:2.60:38,3,0	1/1:16,16:25:23.64:279,24,0	0/0:28,0:20:12.01:0,12,112	1/1:1,9:9:6.02:78,6,0	1/1:9,15:17:2.70:39,3,0	1/1:6,9:13:7.33:99,7,0	1/1:8,14:19:44.27:578,44,0	1/1:4,7:13:26.68:271,27,0	1/1:2,2:2:5.99:50,6,0
chr10	82087507	.	C	CA	2632.99	PASS	AB=0.946;AC=37;AF=0.661;AN=56;BaseQRankSum=-0.801;DP=614;FS=2.544;HRun=1;HaplotypeScore=119.0734;InbreedingCoeff=0.4329;MQ=37.20;MQ0=74;MQRankSum=0.821;QD=7.95;ReadPosRankSum=2.195;VQSLOD=1.2737;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:66.20:0,66,871	1/1:5,0:5:10.58:117,11,0	0/0:77,0:11:29.92:0,30,338	0/0:92,0:11:21.03:0,21,252	1/1:16,3:14:9.47:60,9,0	0/1:16,1:16:9.89:33,0,10	0/0:23,0:22:41.83:0,42,510	0/1:18,1:15:35.75:268,0,36	1/1:9,1:7:0.85:35,1,0	1/1:13,0:11:5.97:123,6,0	1/1:13,3:16:6.01:73,6,0	0/1:21,1:18:34.02:75,0,34	0/0:16,0:13:11.25:0,11,119	0/0:20,0:18:15.88:0,16,195	1/1:16,0:16:10.40:96,10,0	0/1:11,1:11:38.08:92,0,38	1/1:19,6:21:36.95:356,37,0	1/1:11,1:11:16.63:167,17,0	0/1:15,0:13:14.60:210,0,15	1/1:4,0:4:2.77:38,3,0	1/1:27,2:24:21.73:201,22,0	0/0:26,0:18:12.01:0,12,146	1/1:12,0:11:4.44:14,4,0	1/1:23,4:20:1.97:7,2,0	1/1:13,1:12:7.19:74,7,0	1/1:23,0:20:27.48:489,27,0	1/1:13,0:13:20.51:242,21,0	1/1:4,0:2:5.99:50,6,0
chr10	82087527	.	ATG	A	65.03	PASS	AB=0.961;AC=11;AF=0.196;AN=56;BaseQRankSum=6.726;DP=651;FS=16.215;HRun=0;HaplotypeScore=130.1974;InbreedingCoeff=-0.1433;MQ=43.06;MQ0=69;MQRankSum=-5.305;QD=0.40;ReadPosRankSum=1.974;VQSLOD=1.8538;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:76.93:0,77,1525	0/0:5,1:6:3.06:0,3,20	0/0:98,1:19:37.97:0,38,696	0/0:105,1:18:9.09:0,9,500	0/0:24,0:20:19.43:0,19,146	0/0:16,1:15:12.92:0,13,96	0/0:21,0:21:29.28:0,29,207	0/0:28,0:24:56.24:0,56,378	0/1:15,0:12:3.81:4,0,45	0/1:7,0:6:12.03:12,0,59	0/1:9,0:9:1.37:1,0,17	0/0:22,0:20:11.57:0,12,130	0/0:17,1:16:0.26:0,0,385	0/0:16,0:14:17.11:0,17,300	0/1:14,1:15:1.86:2,0,84	0/0:15,1:14:16.81:0,17,133	0/1:25,0:22:16.91:17,0,92	0/0:8,0:7:9.45:0,9,50	0/1:17,1:17:58.38:58,0,164	0/0:7,0:7:5.42:0,5,23	0/1:33,0:28:18.20:18,0,73	0/0:23,0:16:24.08:0,24,462	1/1:8,1:7:0.47:1,0,0	0/0:23,0:18:5.93:0,6,75	0/0:13,0:11:22.75:0,23,126	0/1:19,1:18:30.22:30,0,72	0/1:10,3:13:42.63:43,0,43	0/0:5,0:3:8.02:0,8,32
chr10	82087529	.	GCA	G	6373.67	PASS	AB=0.738;AC=44;AF=0.786;AN=56;BaseQRankSum=5.991;DP=646;FS=3.385;HRun=0;HaplotypeScore=108.4460;InbreedingCoeff=0.6949;MQ=43.53;MQ0=64;MQRankSum=-1.391;QD=17.18;ReadPosRankSum=2.452;VQSLOD=5.0731;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:60.13:0,60,930	1/1:1,5:6:15.05:186,15,0	0/0:97,0:21:15.26:0,15,384	0/0:102,0:17:21.42:0,21,267	1/1:5,17:18:14.87:186,15,0	1/1:5,12:15:17.94:223,18,0	1/1:5,14:19:38.96:480,39,0	1/1:8,19:23:61.97:729,62,0	1/1:4,9:11:21.07:260,21,0	1/1:3,4:6:11.40:120,11,0	1/1:1,9:10:9.03:112,9,0	1/1:6,15:19:45.14:553,45,0	0/1:17,2:17:44.19:44,0,359	0/0:18,0:15:17.95:0,18,265	1/1:6,9:15:32.95:384,33,0	0/1:4,12:14:19.12:304,0,19	1/1:9,16:22:41.67:459,42,0	1/1:2,5:6:15.05:186,15,0	1/1:11,9:19:13.03:304,13,0	1/1:1,5:7:5.84:74,6,0	1/1:18,17:30:29.66:353,30,0	0/0:23,0:16:21.54:0,22,345	1/1:4,6:8:6.02:74,6,0	1/1:8,14:18:17.99:223,18,0	1/1:3,10:11:23.67:241,24,0	1/1:7,13:18:36.28:521,36,0	1/1:8,6:14:9.37:248,9,0	1/1:2,3:3:9.03:112,9,0
chr10	82087810	.	AGTGTGT	A	154.67	PASS	AB=1.000;AC=11;AF=0.393;AN=28;BaseQRankSum=2.322;DP=506;FS=0.000;HRun=0;HaplotypeScore=100.7738;InbreedingCoeff=0.4973;MQ=71.04;MQ0=12;MQRankSum=-1.368;QD=1.02;ReadPosRankSum=1.495;VQSLOD=1.8201;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:22:2.96:59,3,0	./.	./.	./.	./.	1/1:18,5:22:5.89:75,6,0	1/1:29,0:32:2.94:41,3,0	./.	0/0:19,1:20:0.47:0,0,1	./.	./.	./.	./.	1/1:21,0:24:3.01:40,3,0	0/0:20,1:22:0:0,0,0	./.	1/1:22,0:23:3:42,3,0	./.	0/0:13,0:13:3.01:0,3,78	0/0:12,0:12:12.03:0,12,225	0/0:38,0:37:3:0,3,25	./.	./.	0/1:25,0:25:0:0,0,0	./.	0/0:17,0:17:9.03:0,9,246	0/0:17,0:17:12.02:0,12,215	0/0:16,0:15:18.06:0,18,537
chr10	82088280	.	C	CAAA	15241.52	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=-4.324;DP=535;FS=12.110;HRun=10;HaplotypeScore=85.1741;InbreedingCoeff=0.7689;MQ=72.37;MQ0=0;MQRankSum=-2.282;QD=32.36;ReadPosRankSum=-3.654;VQSLOD=2.0259;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:48.10:0,48,584	1/1:1,7:9:18.06:327,18,0	0/1:10,0:11:7.61:8,0,81	0/1:9,0:10:12.02:12,0,105	1/1:7,15:27:63.09:985,63,0	1/1:6,19:30:58.48:1014,58,0	1/1:5,4:13:15.02:218,15,0	1/1:9,14:27:57.10:925,57,0	1/1:4,8:13:23.11:377,23,0	1/1:3,18:25:63.17:1112,63,0	1/1:4,14:20:48.08:826,48,0	1/1:4,11:16:36.08:613,36,0	0/0:18,0:18:42.04:0,42,499	0/0:16,0:16:36.68:0,37,445	1/1:5,14:21:45.13:791,45,0	1/1:2,12:16:39.11:678,39,0	1/1:5,32:43:97.12:1663,97,0	1/1:5,7:16:36.06:584,36,0	1/1:5,5:17:33.08:494,33,0	1/1:5,15:23:54.15:954,54,0	1/1:3,10:15:24.04:392,24,0	0/0:8,0:8:21.02:0,21,241	1/1:4,20:27:53.82:985,54,0	1/1:2,3:6:12.04:211,12,0	1/1:7,12:21:30.08:502,30,0	1/1:8,15:25:54.12:886,54,0	1/1:11,12:25:30.06:473,30,0	1/1:9,5:14:14.97:212,15,0
chr10	82089105	.	ACT	A	16935.23	PASS	AB=0.542;AC=43;AF=0.768;AN=56;BaseQRankSum=6.263;DP=553;FS=8.448;HRun=0;HaplotypeScore=128.5694;InbreedingCoeff=0.8792;MQ=90.86;MQ0=0;MQRankSum=-13.546;QD=42.44;ReadPosRankSum=2.282;VQSLOD=5.8321;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,2265	1/1:0,8:9:18.06:290,18,0	0/0:27,0:27:78.20:0,78,1374	0/0:28,0:28:84.24:0,84,1556	1/1:0,11:11:27.09:416,27,0	1/1:1,17:18:48.16:780,48,0	1/1:0,19:19:51.17:818,51,0	1/1:2,36:38:99:1736,108,0	1/1:0,17:17:51.17:829,51,0	1/1:2,24:26:78.27:1265,78,0	1/1:0,14:14:33.11:502,33,0	1/1:1,17:18:45.15:731,45,0	0/0:20,0:20:54.01:0,54,1021	0/0:26,0:26:75.23:0,75,1438	1/1:1,30:31:84.27:1342,84,0	1/1:1,27:28:75.26:1219,75,0	1/1:0,19:19:42.14:672,42,0	1/1:1,14:15:45.15:723,45,0	1/1:1,18:19:54.13:829,54,0	1/1:0,14:14:39.13:624,39,0	1/1:0,19:19:45.15:652,45,0	0/0:13,0:13:36.12:0,36,716	1/1:0,18:18:48.16:768,48,0	0/1:2,11:13:57.84:303,0,58	1/1:0,12:12:30.10:486,30,0	1/1:1,23:24:72.22:1119,72,0	1/1:0,15:15:45.15:733,45,0	1/1:0,2:2:6.02:98,6,0
chr10	82089742	.	T	TTTG	350.53	PASS	AB=0.839;AC=2;AF=0.036;AN=56;BaseQRankSum=1.563;DP=689;FS=0.743;HRun=0;HaplotypeScore=141.2362;InbreedingCoeff=-0.0346;MQ=77.94;MQ0=1;MQRankSum=-3.573;QD=8.15;ReadPosRankSum=-5.281;VQSLOD=1.6312;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:45.44:0,45,1186	0/0:13,0:13:39.03:0,39,359	0/0:31,0:28:57.81:0,58,1243	0/0:31,0:25:24.14:0,24,981	0/0:20,0:20:32.12:0,32,488	0/0:21,0:21:63.02:0,63,566	0/1:11,9:21:99:424,0,207	0/0:46,0:46:99:0,131,1089	0/0:27,0:27:81.04:0,81,753	0/0:19,0:19:21.55:0,22,400	0/0:20,0:20:60.03:0,60,543	0/0:32,0:32:66.96:0,67,779	0/0:28,0:28:81.26:0,81,1433	0/0:25,0:25:75.24:0,75,1343	0/0:38,0:38:85.14:0,85,957	0/1:22,0:22:7.78:8,0,451	0/0:23,0:23:43.13:0,43,578	0/0:19,0:19:57.07:0,57,549	0/0:19,0:19:54.84:0,55,463	0/0:29,0:29:87.06:0,87,791	0/0:20,0:20:54.01:0,54,481	0/0:18,0:18:54.19:0,54,997	0/0:16,0:16:48:0,48,423	0/0:32,0:32:96.09:0,96,898	0/0:25,0:25:28.10:0,28,570	0/0:21,0:21:62.92:0,63,530	0/0:36,0:35:99:0,102,959	0/0:11,0:11:33.06:0,33,325
chr10	82091363	.	TC	T	1176.60	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.328;DP=744;FS=2.115;HRun=2;HaplotypeScore=81.4685;InbreedingCoeff=0.9839;MQ=91.94;MQ0=0;MQRankSum=-0.574;QD=34.61;ReadPosRankSum=1.350;VQSLOD=4.0060;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1706	0/0:15,0:15:45.15:0,45,674	0/0:34,0:34:96.19:0,96,1373	0/0:27,0:27:38.13:0,38,996	0/0:19,0:19:57.19:0,57,853	0/0:30,0:30:90.30:0,90,1349	0/0:22,0:22:60.20:0,60,898	0/0:33,0:33:96.31:0,96,1402	0/0:22,0:22:66.22:0,66,989	0/0:34,0:34:99:0,102,1528	0/0:24,0:24:72.24:0,72,1078	0/0:28,0:28:84.27:0,84,1239	0/0:19,0:19:54.17:0,54,784	0/0:29,0:29:87.29:0,87,1297	0/0:30,0:30:90.30:0,90,1349	0/0:26,0:26:75.25:0,75,1124	0/0:39,0:39:99:0,111,1614	0/0:16,0:16:45.15:0,45,674	0/0:19,0:19:57.16:0,57,813	0/0:30,0:30:90.30:0,90,1348	0/0:37,0:37:99:0,111,1660	0/0:25,0:25:75.24:0,75,1102	0/0:23,0:23:69.22:0,69,1012	0/0:30,0:30:90.25:0,90,1305	0/0:35,0:34:99:0,99,1482	1/1:0,30:30:90.26:1137,90,0	0/0:25,0:25:72.22:0,72,1040	1/1:0,4:4:12.04:156,12,0
chr10	82092203	.	C	CGTGTGTGTGTGTGT	11419.28	PASS	AB=0.872;AC=45;AF=0.865;AN=52;BaseQRankSum=-4.307;DP=687;FS=18.631;HRun=0;HaplotypeScore=271.0467;InbreedingCoeff=0.2808;MQ=57.21;MQ0=13;MQRankSum=-1.980;QD=19.26;ReadPosRankSum=-3.265;VQSLOD=2.0558;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:39:30.10:0,30,898	./.	0/0:21,0:15:3.01:0,3,56	./.	0/1:21,1:21:82.50:602,0,82	1/1:16,0:24:6.02:233,6,0	0/1:10,0:21:23.03:31,0,23	1/1:27,0:27:30.06:747,30,0	1/1:17,0:16:6.02:165,6,0	1/1:30,0:29:32.54:1178,33,0	1/1:23,0:20:18.05:578,18,0	1/1:29,0:28:6.48:91,6,0	1/1:28,0:26:27.08:745,27,0	1/1:27,0:26:11.78:335,12,0	1/1:34,0:33:12.51:558,13,0	1/1:26,0:25:12.04:529,12,0	0/1:23,0:22:6.62:445,0,7	1/1:7,0:12:12.04:603,12,0	1/1:24,0:23:15.03:408,15,0	1/1:32,0:32:5.82:154,6,0	1/1:36,0:36:17.91:137,18,0	1/1:24,0:22:6.02:231,6,0	1/1:20,0:18:6:206,6,0	1/1:24,0:23:9.03:541,9,0	1/1:24,0:24:9.02:229,9,0	1/1:29,0:27:46.29:1469,46,0	1/1:28,0:27:27.09:1063,27,0	1/1:7,0:7:6.01:142,6,0
chr10	82095648	.	GA	G	10837.36	PASS	AB=0.526;AC=45;AF=0.804;AN=56;BaseQRankSum=2.765;DP=614;FS=9.896;HRun=10;HaplotypeScore=69.2107;InbreedingCoeff=0.9017;MQ=80.93;MQ0=0;MQRankSum=-2.464;QD=21.13;ReadPosRankSum=3.405;VQSLOD=5.5417;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:71.94:618,72,0	1/1:1,14:15:32.88:286,33,0	0/0:19,0:19:21.16:0,21,275	0/0:19,0:20:16.31:0,16,370	1/1:5,33:38:86.49:776,86,0	1/1:3,34:38:98.01:839,98,0	1/1:4,16:20:38.99:339,39,0	1/1:3,21:24:62.97:547,63,0	1/1:1,18:19:50.99:443,51,0	1/1:3,17:20:50.99:443,51,0	1/1:2,23:25:65.98:573,66,0	1/1:3,19:22:26.80:462,27,0	0/0:12,0:12:27.07:0,27,299	0/0:30,0:30:84.21:0,84,920	1/1:4,21:25:56.98:495,57,0	1/1:3,11:14:23.99:208,24,0	1/1:2,21:23:59.98:521,60,0	1/1:0,9:9:26.99:234,27,0	1/1:4,13:17:38.98:339,39,0	1/1:5,34:39:95.94:833,96,0	1/1:1,10:11:29.99:260,30,0	0/0:20,0:20:36.10:0,36,397	1/1:5,22:27:59.11:519,59,0	0/1:1,9:10:6.18:181,0,6	1/1:4,17:21:20.80:410,21,0	1/1:1,17:18:50.99:443,51,0	1/1:3,32:35:83.97:729,84,0	1/1:1,14:15:38.99:339,39,0
chr10	82095770	.	AAG	A	4141.05	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=-11.643;DP=754;FS=0.777;HRun=0;HaplotypeScore=149.8868;InbreedingCoeff=0.5731;MQ=90.50;MQ0=0;MQRankSum=-3.158;QD=19.08;ReadPosRankSum=-0.097;VQSLOD=3.7944;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.24:0,81,1516	0/0:16,0:16:24.77:0,25,78	0/0:33,0:32:77.88:0,78,1270	0/0:28,0:29:73.92:0,74,1189	0/0:40,0:40:29.58:0,30,155	0/0:35,0:35:41.87:0,42,120	1/1:0,22:22:51.17:779,51,0	0/1:29,0:29:22.21:22,0,135	0/0:26,0:26:32.55:0,33,110	0/1:25,0:25:33.07:33,0,90	0/0:33,0:33:39.81:0,40,226	0/0:24,0:24:18.74:0,19,104	1/1:0,24:24:66.22:1008,66,0	1/1:0,23:23:63.21:962,63,0	0/0:36,0:36:51.20:0,51,142	0/0:24,0:24:35.54:0,36,124	0/0:21,0:21:29.27:0,29,112	0/0:14,0:14:21.66:0,22,71	0/1:25,0:25:5.96:6,0,125	0/0:32,0:32:34.58:0,35,140	0/0:25,0:25:32.91:0,33,81	1/1:0,34:34:90.13:1316,90,0	0/0:22,0:22:13.48:0,13,101	0/0:22,0:22:31:0,31,105	0/0:21,0:21:32.55:0,33,109	0/1:35,0:35:15.37:15,0,96	0/0:43,0:43:61.18:0,61,169	0/0:14,0:14:5.87:0,6,19
chr10	82095771	.	AG	A	17138.80	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.914;DP=746;FS=5.713;HRun=5;HaplotypeScore=88.8657;InbreedingCoeff=0.9991;MQ=89.89;MQ0=0;MQRankSum=-8.914;QD=26.01;ReadPosRankSum=6.358;VQSLOD=4.1371;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.23:0,78,1013	1/1:1,15:16:42.12:475,42,0	0/0:32,0:31:50.13:0,50,836	0/0:28,0:28:60.59:0,61,756	1/1:0,40:40:99:1276,117,0	1/1:1,34:35:75.21:848,75,0	1/1:22,0:22:48.88:259,49,0	1/1:3,26:29:78.14:823,78,0	1/1:1,25:26:57.16:645,57,0	1/1:2,23:25:69.15:753,69,0	1/1:3,28:31:78.03:835,78,0	1/1:0,22:22:60.13:665,60,0	1/1:24,0:24:63.25:335,63,0	1/1:23,0:23:60.34:319,60,0	1/1:1,35:36:93.27:1052,93,0	1/1:2,22:24:57.16:645,57,0	1/1:1,20:21:45.13:509,45,0	1/1:1,13:14:36.10:407,36,0	1/1:2,23:25:47.26:719,47,0	1/1:0,31:31:90.18:990,90,0	1/1:0,25:25:63.18:712,63,0	1/1:34,0:34:86.35:459,86,0	1/1:2,20:22:47.81:528,48,0	1/1:1,21:22:54.15:611,54,0	1/1:1,20:21:57.16:645,57,0	1/1:1,34:35:99:1098,102,0	1/1:0,42:42:99:1289,114,0	1/1:0,14:14:23.28:245,23,0
chr10	82096221	.	GTGGGAGTA	G	6507.16	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=0.008;DP=688;FS=5.685;HRun=0;HaplotypeScore=227.7392;InbreedingCoeff=0.9994;MQ=81.23;MQ0=0;MQRankSum=-13.677;QD=70.73;ReadPosRankSum=-0.225;VQSLOD=4.1277;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,117,4734	0/0:15,0:15:45.14:0,45,1857	0/0:19,0:19:51.11:0,51,1845	0/0:21,0:22:54.18:0,54,2158	0/0:32,0:32:93.29:0,93,3828	0/0:22,0:22:66.20:0,66,2579	1/1:3,13:16:39.13:1080,39,0	0/0:40,0:40:99:0,114,4620	0/0:29,0:29:81.26:0,81,3434	0/0:34,0:34:96.33:0,96,4043	0/0:16,0:16:45.15:0,45,1966	0/0:24,0:24:69.24:0,69,2914	1/1:1,28:29:72.25:1994,72,0	1/1:1,21:22:66.23:1827,66,0	0/0:28,0:28:81.26:0,81,3368	0/0:23,0:23:63.22:0,63,2756	0/0:20,0:20:54.17:0,54,2192	0/0:9,0:9:24.08:0,24,1050	0/0:19,0:19:48.15:0,48,1920	0/0:31,0:31:87.30:0,87,3717	0/0:19,0:19:51.18:0,51,2181	1/1:4,21:25:63.09:1607,63,0	0/0:30,0:30:87.30:0,87,3682	0/0:20,0:20:51.16:0,51,2026	0/0:18,0:18:45.15:0,45,1892	0/0:37,0:37:99:0,99,4182	0/0:29,0:29:87.30:0,87,3753	0/0:15,0:15:42.14:0,42,1814
chr10	82097584	.	C	CT	3687.23	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-11.626;DP=577;FS=0.448;HRun=1;HaplotypeScore=63.6039;InbreedingCoeff=0.9527;MQ=56.24;MQ0=1;MQRankSum=2.812;QD=40.52;ReadPosRankSum=-0.028;VQSLOD=4.0206;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:75.23:0,75,958	0/0:4,0:4:12.04:0,12,156	0/0:15,0:2:6.02:0,6,78	0/0:15,0:7:12.04:0,12,145	0/0:15,0:15:33.11:0,33,428	0/0:17,0:17:39.13:0,39,506	1/1:2,20:22:54.18:810,54,0	0/0:21,0:21:63.20:0,63,806	0/0:20,0:19:51.15:0,51,648	0/0:17,0:14:39.12:0,39,493	0/0:7,0:7:18.06:0,18,229	0/0:20,0:20:54.14:0,54,701	1/1:1,33:34:93.32:1394,93,0	1/1:0,19:19:51.17:764,51,0	0/0:21,0:21:51.15:0,51,648	0/0:27,0:27:66.20:0,66,842	0/0:36,0:36:90.24:0,90,1122	0/0:25,0:24:51.17:0,51,662	0/0:16,0:16:45.14:0,45,577	0/0:14,0:14:42.12:0,42,531	0/0:40,0:40:93.29:0,93,1190	1/1:0,16:16:48.16:719,48,0	0/0:18,0:18:48.16:0,48,623	0/0:26,0:26:75.09:0,75,899	0/0:25,0:25:66.21:0,66,850	0/0:13,0:13:30.05:0,30,370	0/0:32,0:32:87.28:0,87,1129	0/0:12,0:12:33.11:0,33,428
chr10	82099624	.	GA	G	12074.98	PASS	AB=0.955;AC=53;AF=0.946;AN=56;BaseQRankSum=-5.356;DP=605;FS=19.217;HRun=10;HaplotypeScore=63.9545;InbreedingCoeff=0.7425;MQ=73.89;MQ0=1;MQRankSum=-5.648;QD=20.64;ReadPosRankSum=5.675;VQSLOD=3.8230;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:59.99:521,60,0	1/1:1,5:6:14.99:130,15,0	0/1:20,1:19:2.96:3,0,240	0/0:19,1:19:9.86:0,10,277	1/1:8,16:24:40.04:406,40,0	1/1:1,11:12:32.94:278,33,0	1/1:2,19:21:47.99:417,48,0	1/1:6,24:30:41.73:575,42,0	1/1:3,19:23:47.02:396,47,0	1/1:4,32:36:98.94:850,99,0	1/1:1,26:27:71.96:625,72,0	1/1:1,25:27:74.01:631,74,0	1/1:3,19:23:25.84:441,26,0	1/1:3,15:18:44.93:382,45,0	1/1:3,27:30:71.98:625,72,0	1/1:2,12:14:32.99:286,33,0	1/1:2,19:21:47.97:417,48,0	1/1:2,13:15:35.98:312,36,0	1/1:3,19:22:50.93:480,51,0	1/1:3,23:26:68.98:599,69,0	1/1:0,18:18:44.99:391,45,0	1/1:3,16:19:47.99:417,48,0	1/1:1,24:25:71.98:625,72,0	1/1:0,13:14:35.03:292,35,0	1/1:2,19:21:53.99:468,54,0	1/1:4,26:30:74.97:648,75,0	1/1:1,26:27:71.98:625,72,0	1/1:1,11:12:26.98:234,27,0
chr10	82102709	.	GA	G	646.48	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.704;DP=692;FS=4.765;HRun=9;HaplotypeScore=67.9844;InbreedingCoeff=0.9785;MQ=74.36;MQ0=0;MQRankSum=-4.993;QD=18.47;ReadPosRankSum=0.709;VQSLOD=4.0164;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,31:35:81.04:741,81,0	0/0:8,0:8:24.07:0,24,277	0/0:26,1:22:14.05:0,14,387	0/0:16,0:16:33.68:0,34,339	0/0:38,0:38:99:0,108,1246	0/0:26,0:26:75.21:0,75,857	0/0:24,0:24:66.20:0,66,762	0/0:32,0:32:80.58:0,81,891	0/0:20,0:20:57.17:0,57,658	0/0:29,0:29:75.20:0,75,846	0/0:25,0:25:69.19:0,69,786	0/0:20,0:20:54.11:0,54,607	0/0:19,0:19:51.14:0,51,580	0/0:23,0:23:63.19:0,63,727	0/0:16,0:16:42.11:0,42,475	0/0:34,0:34:99:0,99,1142	0/0:21,0:21:50.36:0,50,561	0/0:18,0:18:51.13:0,51,577	0/0:25,0:25:69.01:0,69,752	0/0:36,0:36:99:0,102,1175	0/0:16,0:16:45.12:0,45,510	0/0:20,0:20:57.14:0,57,637	0/0:26,0:27:72.05:0,72,809	0/0:26,0:28:69.04:0,69,775	0/0:31,0:31:81.24:0,81,935	0/0:31,0:31:84.22:0,84,941	0/0:29,0:29:81.24:0,81,935	0/0:17,0:17:48.13:0,48,540
chr10	82103550	.	A	AC	19830.76	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=9.259;DP=762;FS=7.356;HRun=6;HaplotypeScore=118.5171;InbreedingCoeff=0.9491;MQ=86.69;MQ0=0;MQRankSum=-4.938;QD=30.37;ReadPosRankSum=5.309;VQSLOD=3.5540;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,132,1315	1/1:3,12:15:39.12:490,39,0	0/0:32,0:33:31.52:0,32,525	0/0:26,0:26:38.95:0,39,451	1/1:1,23:24:63.20:792,63,0	1/1:0,15:15:36.12:453,36,0	1/1:7,23:30:66.21:830,66,0	1/1:5,17:22:48.03:551,48,0	1/1:1,23:24:57.18:717,57,0	1/1:2,25:27:75.22:916,75,0	1/1:1,16:17:39.06:470,39,0	1/1:1,34:35:93.26:1146,93,0	1/1:2,33:35:93.30:1168,93,0	1/1:4,24:28:66.21:830,66,0	1/1:2,43:45:99:1245,99,0	1/1:3,26:29:69.12:868,69,0	1/1:1,24:25:66.21:828,66,0	1/1:2,12:14:39.11:473,39,0	1/1:1,23:24:72.06:822,72,0	1/1:1,26:27:75.18:915,75,0	1/1:5,34:39:78.25:981,78,0	1/1:1,23:24:63.03:750,63,0	1/1:3,26:29:69.03:857,69,0	1/1:3,36:39:96.31:1207,96,0	1/1:1,17:18:39.12:491,39,0	1/1:6,33:39:99:1237,102,0	1/1:3,26:28:62.99:792,63,0	0/0:1,0:1:2.88:0,3,15
chr10	82104735	.	AC	A	19361.29	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=16.661;DP=666;FS=0.000;HRun=1;HaplotypeScore=106.4240;InbreedingCoeff=0.9992;MQ=86.70;MQ0=0;MQRankSum=-4.568;QD=38.96;ReadPosRankSum=3.253;VQSLOD=4.8383;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.25:0,84,1293	1/1:0,12:12:36.12:502,36,0	0/0:25,0:25:48.81:0,49,1016	0/0:19,0:19:47.31:0,47,751	1/1:0,25:25:75.25:1047,75,0	1/1:0,23:23:63.21:881,63,0	0/0:24,0:24:72.18:0,72,1056	1/1:1,41:42:99:1720,126,0	1/1:0,22:22:54.18:754,54,0	1/1:0,28:28:81.26:1115,81,0	1/1:0,27:27:72.24:1006,72,0	1/1:0,14:14:42.14:587,42,0	0/0:24,0:24:72.25:0,72,1145	0/0:24,0:24:72.25:0,72,1151	1/1:0,35:35:96.32:1341,96,0	1/1:0,18:18:39.13:545,39,0	1/1:1,16:17:35.69:540,36,0	1/1:0,8:8:24.08:336,24,0	1/1:0,18:18:54.18:754,54,0	1/1:0,41:41:99:1715,123,0	1/1:0,32:32:93.31:1299,93,0	0/0:25,0:25:75.26:0,75,1198	1/1:0,30:30:87.29:1216,87,0	1/1:0,13:13:39.13:545,39,0	1/1:0,28:28:69.23:965,69,0	1/1:0,20:20:60.18:820,60,0	1/1:0,34:34:96.32:1337,96,0	1/1:0,10:10:24.08:336,24,0
chr10	82107430	.	G	GA	4313.45	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-10.355;DP=706;FS=8.185;HRun=6;HaplotypeScore=66.7035;InbreedingCoeff=0.9616;MQ=82.01;MQ0=0;MQRankSum=-1.329;QD=31.26;ReadPosRankSum=0.489;VQSLOD=5.2081;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.20:0,87,887	0/0:10,0:10:24.05:0,24,245	0/0:24,0:24:54.09:0,54,537	0/0:22,0:22:56.98:0,57,545	0/0:38,0:38:99:0,102,1040	0/0:26,0:26:72.16:0,72,734	1/1:2,23:25:66.21:830,66,0	0/0:32,0:32:75.14:0,75,755	0/0:28,0:28:78.17:0,78,795	0/0:25,0:25:69.15:0,69,702	0/0:29,0:29:81.18:0,81,825	0/0:22,0:22:63.14:0,63,642	1/1:2,17:19:48.15:604,48,0	1/1:4,27:31:78.25:977,78,0	0/0:28,0:28:78.16:0,78,789	0/0:25,0:25:69.14:0,69,697	0/0:28,0:28:81.15:0,81,817	0/0:8,0:8:18.03:0,18,184	0/0:27,0:27:69.02:0,69,688	0/0:30,0:30:87.18:0,87,880	0/0:21,0:21:63.14:0,63,643	1/1:2,18:20:48.15:602,48,0	0/0:29,0:29:84.17:0,84,848	0/0:21,0:21:63.14:0,63,643	0/0:29,0:29:81.18:0,81,826	1/1:4,37:41:25.71:1263,26,0	0/0:36,0:36:99:0,99,1010	1/1:0,2:2:3.01:38,3,0
chr10	82109551	.	GA	G	7241.45	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=10.501;DP=619;FS=7.872;HRun=8;HaplotypeScore=66.8594;InbreedingCoeff=0.9982;MQ=74.66;MQ0=0;MQRankSum=-0.484;QD=23.74;ReadPosRankSum=5.560;VQSLOD=5.1437;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.27:0,93,1110	1/1:2,9:11:24.04:232,24,0	0/0:17,0:17:33.10:0,33,393	0/0:14,0:14:30.93:0,31,339	1/1:2,38:40:99:956,99,0	1/1:3,28:31:78.12:753,78,0	0/0:14,0:14:36.11:0,36,435	0/0:40,0:40:99:0,102,1202	1/1:1,15:16:42.07:405,42,0	1/1:4,14:18:42.07:406,42,0	1/1:2,18:20:51.08:492,51,0	1/1:3,14:17:39.06:377,39,0	0/0:24,0:24:66.20:0,66,797	0/0:20,1:21:34.26:0,34,683	1/1:0,13:13:36.06:348,36,0	1/1:2,17:19:51.08:492,51,0	1/1:1,18:19:48.08:463,48,0	1/1:3,17:20:45.07:435,45,0	0/0:27,0:27:78.23:0,78,934	0/0:30,0:30:81.25:0,81,977	1/1:2,13:15:27.04:261,27,0	0/0:18,0:18:51.16:0,51,616	1/1:4,22:26:60.09:579,60,0	1/1:1,21:22:60.09:579,60,0	1/1:1,17:18:48.07:463,48,0	0/0:31,2:33:29.30:0,29,920	0/0:34,0:34:96.26:0,96,1139	0/0:10,0:10:18.06:0,18,218
chr10	82110431	.	C	CTCTCTCTC	3675.25	PASS	AB=1.000;AC=46;AF=0.852;AN=54;BaseQRankSum=-0.953;DP=474;FS=1.112;HRun=0;HaplotypeScore=128.1799;InbreedingCoeff=0.2082;MQ=42.16;MQ0=20;MQRankSum=0.106;QD=8.15;ReadPosRankSum=-2.436;VQSLOD=2.2141;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:28:41.95:42,0,241	1/1:8,0:8:12.04:333,12,0	0/0:4,0:2:2.96:0,3,19	./.	1/1:23,0:22:3.01:99,3,0	1/1:15,0:14:6.91:177,7,0	1/1:35,0:33:15.64:293,16,0	1/1:19,0:17:18.38:426,18,0	1/1:26,0:25:15.50:285,15,0	1/1:22,0:22:23.07:521,23,0	1/1:14,0:12:3.90:56,4,0	1/1:20,0:19:2.53:55,3,0	1/1:16,0:15:19.58:393,20,0	1/1:22,0:21:6.37:117,6,0	1/1:24,0:23:3.44:50,3,0	1/1:18,0:17:3.48:33,3,0	1/1:17,0:17:8.75:136,9,0	1/1:6,0:5:3.01:77,3,0	1/1:8,0:6:7.32:50,7,0	1/1:17,0:16:9.03:222,9,0	1/1:14,0:11:6.01:129,6,0	0/1:21,0:21:0:1,0,0	0/1:14,0:13:0:1,0,0	1/1:14,0:13:3.01:99,3,0	1/1:9,0:8:3.01:38,3,0	0/1:18,0:18:22.31:22,0,201	1/1:15,4:16:3.04:21,3,0	0/0:9,0:7:8.90:0,9,134
chr10	82110434	.	TCACACA	T	438.03	PASS	AB=0.600;AC=3;AF=0.054;AN=56;BaseQRankSum=0.238;DP=503;FS=11.585;HRun=0;HaplotypeScore=118.9521;InbreedingCoeff=0.2139;MQ=41.35;MQ0=22;MQRankSum=0.356;QD=16.22;ReadPosRankSum=2.819;VQSLOD=2.5768;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:44.91:0,45,1130	0/0:8,0:8:3.01:0,3,92	0/0:5,0:3:3.01:0,3,57	0/0:12,0:3:3.01:0,3,45	0/0:23,0:23:17.85:0,18,451	0/0:17,0:16:15.05:0,15,385	0/0:37,0:35:44.94:0,45,1119	0/0:26,0:24:33.03:0,33,610	0/0:28,0:27:24.01:0,24,503	0/0:21,0:22:45.41:0,45,883	0/0:13,0:12:9.03:0,9,229	0/0:22,0:21:3.01:0,3,73	0/0:18,0:17:17.90:0,18,352	0/0:22,0:21:11.90:0,12,226	0/0:9,0:25:2.78:0,3,18	0/0:16,0:16:21.07:0,21,466	0/0:19,0:18:35.80:0,36,536	0/0:6,0:5:3.01:0,3,56	0/0:7,0:5:12.04:0,12,238	0/0:16,0:15:8.50:0,9,242	0/0:15,0:12:20.86:0,21,475	0/0:22,0:22:20.86:0,21,496	0/0:14,0:13:14.51:0,15,387	0/0:17,0:16:9.03:0,9,237	0/0:10,0:9:15.05:0,15,404	0/1:6,11:18:25.51:405,0,26	0/0:19,0:15:8.78:0,9,136	1/1:3,6:7:6.02:126,6,0
chr10	82110456	.	A	ACACA	3202.49	PASS	AB=0.966;AC=34;AF=0.630;AN=54;BaseQRankSum=-2.572;DP=610;FS=4.815;HRun=0;HaplotypeScore=106.8031;InbreedingCoeff=0.3532;MQ=44.79;MQ0=29;MQRankSum=-1.693;QD=7.12;ReadPosRankSum=-0.810;VQSLOD=2.3204;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:29:14.35:0,14,434	1/1:8,0:8:3.01:46,3,0	1/1:32,0:11:0.86:2,1,0	0/0:38,0:12:3.46:0,3,13	0/1:26,0:25:29.29:151,0,29	1/1:21,0:19:15.05:245,15,0	1/1:31,0:30:32.58:490,33,0	1/1:29,0:27:8.40:51,8,0	0/1:29,0:28:16.40:242,0,16	0/1:30,0:29:4.36:473,0,4	1/1:18,0:16:6.02:118,6,0	0/1:15,8:24:0:0,0,0	0/1:16,0:15:1.34:1,0,163	0/0:24,0:23:12.02:0,12,166	0/1:26,0:25:0:0,0,0	0/1:24,0:23:9.26:266,0,9	1/1:21,0:20:26.35:291,26,0	./.	1/1:16,0:12:7.82:85,8,0	1/1:21,0:20:9.71:151,10,0	1/1:22,0:18:12.51:198,13,0	0/0:23,0:23:11.53:0,12,221	0/1:14,0:14:22.97:176,0,23	1/1:16,0:15:8.71:56,9,0	1/1:10,0:9:15.05:238,15,0	0/0:23,0:23:6.93:0,7,178	1/1:16,0:13:5.96:87,6,0	0/0:14,0:12:6.01:0,6,56
chr10	82110632	.	GAA	G	2785.56	PASS	AB=0.842;AC=38;AF=0.760;AN=50;BaseQRankSum=3.081;DP=399;FS=5.663;HRun=4;HaplotypeScore=109.7949;InbreedingCoeff=0.3530;MQ=32.46;MQ0=61;MQRankSum=-3.599;QD=8.65;ReadPosRankSum=6.552;VQSLOD=-0.1537;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:16:27.08:0,27,178	1/1:2,1:3:2.94:30,3,0	./.	./.	1/1:4,4:7:10.74:91,11,0	1/1:9,8:12:29.79:256,30,0	0/0:14,0:18:32.72:0,33,197	1/1:29,0:24:28.81:358,29,0	1/1:6,9:14:29.87:271,30,0	1/1:23,0:16:20.40:175,20,0	0/1:15,0:14:0:0,0,0	1/1:5,6:10:15.49:148,15,0	0/1:6,0:14:6.15:41,0,6	0/1:5,0:7:3.83:4,0,29	1/1:4,12:15:35.94:344,36,0	1/1:6,9:14:26.34:216,26,0	1/1:13,3:13:15.20:128,15,0	0/1:13,1:11:1.88:118,0,2	1/1:12,0:9:14.98:140,15,0	./.	1/1:8,2:6:4.51:19,5,0	0/0:17,0:12:1.46:0,1,4	1/1:14,2:15:3.89:31,4,0	0/1:17,2:10:12.67:37,0,13	1/1:6,6:10:6.39:168,6,0	1/1:19,1:19:19.54:149,20,0	1/1:5,4:9:20.85:180,21,0	0/1:13,0:4:12.69:23,0,13
chr10	82110633	.	AAAAGAGAG	A	5781.29	PASS	AB=0.915;AC=35;AF=0.673;AN=52;BaseQRankSum=3.410;DP=399;FS=10.816;HRun=0;HaplotypeScore=118.0530;InbreedingCoeff=0.4981;MQ=32.65;MQ0=59;MQRankSum=-2.702;QD=19.94;ReadPosRankSum=5.090;VQSLOD=3.3200;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:16:30.36:0,30,404	1/1:3,0:3:3.01:71,3,0	./.	./.	1/1:8,0:7:9.57:215,10,0	1/1:18,0:12:29.18:540,29,0	0/0:21,0:18:48.87:0,49,534	1/1:8,21:24:37.14:439,37,0	1/1:15,0:14:29.26:593,29,0	1/1:11,0:16:20.36:341,20,0	0/1:4,0:14:0:0,0,0	1/1:11,0:10:15.52:356,16,0	0/0:16,0:14:21.07:0,21,407	0/0:11,0:8:9.03:0,9,200	1/1:15,0:15:35.33:787,35,0	1/1:16,0:15:29.98:576,30,0	1/1:14,0:12:13.63:248,14,0	0/1:13,0:10:6.53:184,0,7	1/1:2,8:9:17.98:274,18,0	0/0:4,9:11:0.47:0,0,1	1/1:10,0:6:3.20:63,3,0	0/0:6,0:13:18.04:0,18,387	1/1:3,0:15:6.02:118,6,0	0/1:18,0:10:13.28:70,0,13	1/1:12,0:10:8.46:417,8,0	0/1:18,0:19:99:100,0,316	1/1:9,0:9:20.89:373,21,0	0/1:14,0:4:14.87:15,0,121
chr10	82110634	.	A	AG	3187.31	PASS	AB=0.973;AC=39;AF=0.750;AN=52;BaseQRankSum=2.098;DP=404;FS=7.362;HRun=0;HaplotypeScore=113.1031;InbreedingCoeff=0.3516;MQ=32.82;MQ0=56;MQRankSum=-3.661;QD=9.49;ReadPosRankSum=5.503;VQSLOD=3.4184;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:17:15.95:0,16,150	1/1:3,0:3:3.90:38,4,0	./.	./.	1/1:8,0:7:14.48:124,14,0	1/1:18,0:12:30.83:314,31,0	0/0:21,0:18:31.55:0,32,180	1/1:29,0:25:34.18:391,34,0	1/1:14,0:14:30.03:329,30,0	1/1:23,0:16:20.95:176,21,0	0/1:15,0:14:0:0,0,0	1/1:12,0:11:17.53:175,18,0	0/1:16,0:14:5.82:41,0,6	0/1:10,0:8:3.89:4,0,29	1/1:15,0:15:36.10:417,36,0	1/1:16,0:15:32.09:281,32,0	1/1:14,1:12:16.37:147,16,0	0/1:11,2:10:4.15:129,0,4	1/1:11,0:10:17.94:160,18,0	0/0:13,0:11:0.47:0,0,1	1/1:10,0:6:7.10:32,7,0	0/1:19,0:14:0.65:1,0,1	1/1:16,0:15:4.56:39,5,0	0/1:17,1:10:8.19:63,0,8	1/1:12,0:10:10.23:205,10,0	1/1:21,0:20:5.24:56,5,0	1/1:9,0:9:21.37:183,21,0	0/1:13,0:4:12.69:23,0,13
chr10	82110635	.	A	AG	1270.15	PASS	AB=1.000;AC=15;AF=0.300;AN=50;BaseQRankSum=-6.184;DP=412;FS=7.974;HRun=0;HaplotypeScore=123.1437;InbreedingCoeff=0.3290;MQ=32.92;MQ0=54;MQRankSum=3.268;QD=7.61;ReadPosRankSum=-1.154;VQSLOD=3.1830;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:18:49.13:49,0,57	0/0:3,0:3:0.47:0,0,1	./.	./.	0/0:8,0:7:2.49:0,2,6	0/0:18,0:12:5.58:0,6,18	1/1:12,7:18:17.98:190,18,0	0/0:30,0:26:5.15:0,5,34	0/0:14,0:14:3.80:0,4,9	0/1:22,0:16:6.97:7,0,15	./.	0/0:12,0:11:1.77:0,2,5	1/1:16,0:14:8.58:95,9,0	0/1:10,0:8:14.96:33,0,15	0/0:15,0:15:5.17:0,5,14	0/0:16,0:15:6.05:0,6,20	0/0:15,0:13:1.48:0,1,4	0/0:13,0:10:4.09:0,4,40	0/0:11,0:10:9.19:0,9,39	0/0:13,0:11:0.47:0,0,1	0/0:10,0:6:2.98:0,3,17	1/1:20,0:15:18.06:273,18,0	1/1:16,0:15:0.46:1,0,0	0/0:17,0:9:4.37:0,4,43	0/0:12,0:10:2.24:0,2,6	1/1:7,16:23:53.92:667,54,0	0/0:9,0:9:4.11:0,4,16	1/1:15,1:7:0.05:94,0,0
chr10	82110638	.	AG	A	1100.85	PASS	AB=0.834;AC=24;AF=0.480;AN=50;BaseQRankSum=10.803;DP=406;FS=4.590;HRun=1;HaplotypeScore=114.9227;InbreedingCoeff=0.2061;MQ=33.15;MQ0=47;MQRankSum=-6.523;QD=5.32;ReadPosRankSum=2.963;VQSLOD=0.9084;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:19:14.36:0,14,171	1/1:2,1:3:2.99:23,3,0	./.	./.	1/1:4,4:7:8.89:59,9,0	0/1:9,8:12:29.17:132,0,29	0/0:20,0:18:17.95:0,18,226	0/0:29,1:26:5.29:0,5,363	1/1:5,9:14:7.66:155,8,0	0/1:22,0:16:40.24:40,0,48	./.	1/1:5,7:11:17.83:127,18,0	0/0:15,0:13:21.06:0,21,263	0/0:10,0:8:9.03:0,9,128	1/1:3,12:15:33.63:243,34,0	0/1:7,9:15:26.63:150,0,27	0/1:12,3:12:31.13:53,0,31	0/1:9,1:9:36.48:36,0,107	0/1:11,0:10:24.76:25,0,59	0/0:13,0:11:0.47:0,0,1	1/1:8,2:6:2.68:11,3,0	0/0:18,0:15:20.22:0,20,319	1/1:13,2:15:5.90:38,6,0	0/1:15,2:10:15.42:15,0,28	1/1:6,6:10:17.91:135,18,0	0/0:23,1:24:38.78:0,39,680	0/1:6,1:10:28.32:28,0,75	0/0:14,0:6:12.93:0,13,188
chr10	82110642	.	AG	A	1263.45	PASS	AB=0.826;AC=24;AF=0.462;AN=52;BaseQRankSum=11.004;DP=418;FS=0.582;HRun=1;HaplotypeScore=111.3623;InbreedingCoeff=0.3761;MQ=33.86;MQ0=42;MQRankSum=-7.934;QD=6.61;ReadPosRankSum=4.776;VQSLOD=0.8292;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:17.87:0,18,200	1/1:2,1:3:3:26,3,0	./.	0/0:19,0:1:3.01:0,3,35	1/1:4,4:7:8.98:73,9,0	0/1:9,8:12:48.30:146,0,48	0/0:21,0:20:24.02:0,24,317	0/0:34,1:32:35.99:0,36,783	1/1:6,9:14:23.96:205,24,0	0/1:22,0:17:37.20:37,0,127	./.	1/1:5,7:11:18:163,18,0	0/0:17,0:15:24.02:0,24,305	0/0:10,0:8:9.03:0,9,131	1/1:2,12:14:32.97:280,33,0	0/1:6,9:14:11.26:166,0,11	0/1:12,3:12:59.60:60,0,95	0/1:8,1:8:43:43,0,134	0/0:11,0:10:25.78:0,26,243	0/0:15,0:13:0.47:0,0,1	1/1:6,2:5:2.37:9,2,0	0/0:18,0:15:20.21:0,20,320	1/1:13,2:15:5.85:43,6,0	1/1:13,2:10:3:25,3,0	1/1:6,6:10:17.99:154,18,0	0/0:21,1:22:33.47:0,33,777	0/1:10,1:11:12.34:12,0,115	0/0:14,0:7:17.95:0,18,243
chr10	82110646	.	AG	A	1372.63	PASS	AB=0.798;AC=23;AF=0.442;AN=52;BaseQRankSum=11.286;DP=434;FS=0.557;HRun=1;HaplotypeScore=113.0721;InbreedingCoeff=0.4657;MQ=34.32;MQ0=42;MQRankSum=-7.564;QD=7.84;ReadPosRankSum=5.870;VQSLOD=0.9077;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:17.87:0,18,203	1/1:1,1:2:3:27,3,0	./.	0/0:27,0:4:9.03:0,9,106	1/1:3,4:6:8.99:77,9,0	0/1:8,8:12:13.21:162,0,13	0/0:21,0:20:24.03:0,24,330	0/0:42,0:39:89.68:0,90,1055	1/1:7,9:14:27:240,27,0	0/1:22,0:17:38.86:39,0,110	./.	1/1:6,7:12:17.91:151,18,0	0/0:16,0:15:24.03:0,24,318	0/0:10,0:8:9.03:0,9,131	1/1:4,12:15:36.01:321,36,0	0/1:5,9:13:11.04:195,0,11	0/1:11,3:12:59.84:60,0,112	0/1:7,1:7:45.73:46,0,99	0/0:14,0:12:32.06:0,32,333	0/0:14,0:13:3.48:0,3,38	1/1:6,2:5:2.94:19,3,0	0/0:18,0:16:23.20:0,23,348	1/1:13,2:15:5.77:34,6,0	1/1:11,2:9:3:26,3,0	1/1:5,6:9:18.01:161,18,0	0/0:20,1:21:29.95:0,30,756	0/0:13,0:13:24.80:0,25,213	0/0:15,0:9:24.06:0,24,321
chr10	82110650	.	AGAG	A	2799.79	PASS	AB=0.846;AC=24;AF=0.444;AN=54;BaseQRankSum=11.099;DP=455;FS=2.502;HRun=0;HaplotypeScore=113.0989;InbreedingCoeff=0.4941;MQ=40.85;MQ0=45;MQRankSum=-5.745;QD=14.28;ReadPosRankSum=6.698;VQSLOD=3.2347;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:17.93:0,18,316	0/1:2,1:3:9.12:41,0,9	0/1:20,0:1:0:0,0,0	0/0:37,0:9:15.05:0,15,188	1/1:3,4:6:9.03:137,9,0	1/1:9,8:13:24.06:363,24,0	0/0:22,0:21:30.06:0,30,533	0/0:39,0:37:85.43:0,85,1006	1/1:7,9:14:30.09:437,30,0	0/1:21,0:17:85.90:144,0,86	./.	1/1:8,6:14:24.03:330,24,0	0/0:18,0:17:30.05:0,30,537	0/0:10,0:8:9.03:0,9,201	1/1:4,12:15:36.12:543,36,0	0/1:6,9:14:6.74:359,0,7	0/1:10,3:11:69.49:122,0,69	0/1:7,1:7:94.03:117,0,94	0/0:17,0:14:34.05:0,34,438	0/0:14,0:13:3.01:0,3,38	1/1:6,2:5:3.48:37,3,0	0/0:18,0:16:23.60:0,24,516	1/1:13,0:15:5.59:34,6,0	1/1:10,2:8:3.01:46,3,0	1/1:4,6:9:18.06:278,18,0	0/0:23,1:24:19.16:0,19,1039	0/0:14,0:14:6.52:0,7,193	0/0:14,0:8:24.08:0,24,421
chr10	82110652	.	AG	A	1989.80	PASS	AB=0.962;AC=25;AF=0.463;AN=54;BaseQRankSum=10.606;DP=462;FS=0.531;HRun=1;HaplotypeScore=111.7570;InbreedingCoeff=0.5393;MQ=44.51;MQ0=45;MQRankSum=-5.649;QD=10.20;ReadPosRankSum=5.201;VQSLOD=1.5466;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:17.88:0,18,204	0/1:3,0:3:9.13:26,0,9	0/1:25,0:1:0:0,0,0	0/0:40,0:11:15.05:0,15,188	1/1:7,0:6:9.02:89,9,0	1/1:16,1:13:24.05:260,24,0	0/0:24,0:23:36.06:0,36,468	0/0:40,0:38:85.06:0,85,1006	1/1:13,3:14:30.07:321,30,0	0/1:19,0:15:51.81:91,0,52	./.	1/1:11,3:13:23.85:251,24,0	0/0:19,0:18:30.05:0,30,393	0/0:10,0:8:9.03:0,9,131	1/1:15,1:15:36.09:383,36,0	1/1:15,1:15:1.45:256,1,0	0/1:13,1:12:40.85:103,0,41	0/1:6,1:6:81.80:93,0,82	0/0:17,0:14:41.35:0,41,472	0/0:14,0:13:3.01:0,3,38	1/1:8,0:5:3.43:20,3,0	0/0:18,0:16:23.21:0,23,360	1/1:15,0:15:5.17:20,5,0	1/1:9,0:6:3.01:31,3,0	1/1:9,0:9:21.05:232,21,0	0/0:25,0:25:34.91:0,35,863	0/0:14,0:14:27.80:0,28,257	0/0:14,0:8:24.08:0,24,340
chr10	82111257	.	G	GGTCTCTCTCTC	2579.79	PASS	AB=0.792;AC=27;AF=0.482;AN=56;BaseQRankSum=4.153;DP=573;FS=14.021;HRun=0;HaplotypeScore=206.9503;InbreedingCoeff=-0.0943;MQ=75.43;MQ0=6;MQRankSum=-3.421;QD=6.43;ReadPosRankSum=-4.787;VQSLOD=0.4064;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:44.94:0,45,1065	0/1:1,0:8:31.43:58,0,31	0/0:26,0:24:49.91:0,50,847	0/0:30,0:20:42.59:0,43,676	0/1:8,0:32:11.67:44,0,12	0/1:12,0:29:22.71:72,0,23	0/0:18,0:16:32.59:0,33,729	0/0:25,0:25:70.01:0,70,1230	1/1:5,0:15:5.91:118,6,0	0/1:8,0:21:95.50:298,0,95	1/1:5,0:20:3.10:20,3,0	0/1:3,0:14:31.75:33,0,32	1/1:4,0:19:5.07:27,5,0	0/1:17,0:19:82.30:208,0,82	1/1:3,0:29:5.69:40,6,0	0/1:18,0:18:33.08:316,0,33	0/1:17,0:17:56.99:355,0,57	0/1:7,0:7:26.98:27,0,121	0/0:15,0:14:38.99:0,39,628	0/0:22,0:23:45.46:0,45,839	0/0:2,0:11:0:0,0,0	1/1:3,0:23:2.50:20,3,0	1/1:1,0:18:3.44:21,3,0	1/1:4,0:17:2.94:18,3,0	0/1:20,0:21:99:251,0,111	0/1:4,1:23:90.75:703,0,91	0/1:26,0:24:31.18:31,0,576	0/1:16,0:16:88.19:88,0,116
chr10	82111293	.	T	TCACACACACA	1897.23	PASS	AB=0.980;AC=29;AF=0.537;AN=54;BaseQRankSum=-0.539;DP=490;FS=11.218;HRun=0;HaplotypeScore=170.3758;InbreedingCoeff=-0.0980;MQ=46.59;MQ0=13;MQRankSum=-1.446;QD=4.89;ReadPosRankSum=-0.981;VQSLOD=2.0921;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:12.51:0,13,342	0/0:7,0:7:3.22:0,3,13	0/0:4,0:2:6.02:0,6,112	./.	0/1:30,0:28:12.66:87,0,13	0/1:23,0:23:19.01:19,0,80	1/1:26,0:21:8.98:168,9,0	0/1:23,0:19:63.24:363,0,63	0/1:19,0:19:76.30:76,0,138	0/1:19,0:18:33.51:52,0,34	0/0:16,0:15:8.11:0,8,75	0/1:11,0:10:8.14:8,0,59	0/1:24,0:24:62.57:63,0,597	0/0:21,0:22:29.07:0,29,783	0/1:23,0:22:35.75:36,0,107	0/1:14,0:14:20.63:21,0,95	0/1:14,0:19:50.22:50,0,109	0/1:8,0:8:12.62:13,0,115	1/1:12,0:11:8.97:86,9,0	1/1:18,3:32:3.04:19,3,0	0/1:8,0:8:18.91:19,0,69	0/0:24,0:23:23.81:0,24,630	1/1:13,0:13:5.98:94,6,0	0/1:20,0:18:55.14:119,0,55	1/1:12,0:21:7.73:30,8,0	1/1:14,0:12:21.01:438,21,0	1/1:19,0:23:8.75:215,9,0	1/1:4,0:4:3.01:91,3,0
chr10	82112092	.	TAC	T	8641.96	PASS	AB=0.778;AC=49;AF=0.907;AN=54;BaseQRankSum=3.729;DP=922;FS=18.188;HRun=0;HaplotypeScore=181.5799;InbreedingCoeff=0.2182;MQ=65.25;MQ0=14;MQRankSum=0.684;QD=10.18;ReadPosRankSum=6.165;VQSLOD=3.1869;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:44,2:46:5.38:5,0,820	0/1:4,5:10:70.96:129,0,71	./.	0/0:32,0:19:2.90:0,3,16	1/1:15,11:27:2.97:227,3,0	1/1:15,13:30:9.23:273,9,0	1/1:11,0:29:22.72:114,23,0	1/1:20,0:46:17.06:100,17,0	1/1:9,26:37:16.60:592,17,0	1/1:16,16:35:47.96:570,48,0	1/1:9,10:21:12.18:235,12,0	1/1:9,21:30:27.93:496,28,0	1/1:8,0:28:20.47:182,20,0	1/1:6,0:26:15.98:157,16,0	1/1:15,30:45:57.02:835,57,0	1/1:13,31:46:94.05:974,94,0	1/1:10,25:35:24.48:550,24,0	1/1:9,5:15:31.79:304,32,0	1/1:13,0:22:25.66:131,26,0	1/1:7,0:40:34.88:157,35,0	1/1:19,28:47:52.50:679,53,0	1/1:15,0:30:2.76:66,3,0	1/1:8,13:20:29.37:319,29,0	1/1:21,25:48:31.22:540,31,0	1/1:13,20:35:26.90:479,27,0	1/1:16,0:42:48.02:256,48,0	1/1:11,0:38:48.21:236,48,0	0/1:8,0:12:33.93:34,0,35
chr10	82112901	.	TTA	T	4633.64	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-4.626;DP=555;FS=2.318;HRun=0;HaplotypeScore=95.1225;InbreedingCoeff=0.9958;MQ=79.92;MQ0=0;MQRankSum=-1.325;QD=42.12;ReadPosRankSum=0.530;VQSLOD=6.4611;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.20:0,57,1140	0/0:10,0:10:25.39:0,25,146	0/0:20,0:20:39.85:0,40,819	0/0:16,0:15:30.44:0,30,463	0/0:39,0:39:73.45:0,73,505	0/0:18,0:18:50.36:0,50,234	1/1:0,22:22:48.16:777,48,0	0/0:26,0:26:78.25:0,78,1481	0/0:15,0:15:33.78:0,34,171	0/0:25,0:25:21.81:0,22,288	0/0:30,0:30:82.66:0,83,394	0/0:20,0:20:41.97:0,42,195	1/1:0,20:20:51.17:818,51,0	1/1:0,11:11:24.08:389,24,0	0/0:24,0:24:61.63:0,62,296	0/0:15,0:15:36.72:0,37,192	0/0:23,0:23:50.75:0,51,256	0/0:9,0:9:22.56:0,23,112	0/0:16,0:16:48.12:0,48,907	0/0:39,0:39:99:0,117,2192	0/0:9,0:9:25.38:0,25,128	1/1:0,29:29:87.17:1341,87,0	0/0:24,0:24:47.24:0,47,281	0/0:13,0:13:34.16:0,34,190	0/0:16,0:16:39.37:0,39,195	1/1:0,22:22:66.18:1017,66,0	0/0:19,0:19:57.15:0,57,1045	1/1:0,6:6:18.06:292,18,0
chr10	82112902	.	TA	T	8120.07	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=10.798;DP=551;FS=12.671;HRun=8;HaplotypeScore=71.9602;InbreedingCoeff=0.9952;MQ=78.62;MQ0=0;MQRankSum=-0.996;QD=20.40;ReadPosRankSum=5.266;VQSLOD=3.8915;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.17:0,60,713	1/1:1,9:10:24.03:232,24,0	0/0:20,0:20:30.82:0,31,470	0/0:14,0:13:23.86:0,24,255	1/1:5,34:39:99:926,99,0	1/1:0,18:18:54.09:521,54,0	1/1:22,0:22:44.71:202,45,0	0/0:26,0:26:75.21:0,75,885	1/1:1,14:15:33.05:318,33,0	1/1:1,23:24:69.06:649,69,0	1/1:1,29:30:87.01:818,87,0	1/1:0,20:20:45.07:434,45,0	1/1:20,0:20:46.48:208,46,0	1/1:11,0:11:22.38:102,22,0	1/1:1,23:24:63.10:608,63,0	1/1:2,13:15:33.05:319,33,0	1/1:2,21:23:48.08:463,48,0	1/1:1,8:9:21.03:203,21,0	0/0:16,0:16:48.10:0,48,556	0/0:38,0:38:99:0,105,1232	1/1:1,8:9:24.04:232,24,0	1/1:29,0:29:74.45:335,74,0	1/1:2,22:24:59.96:565,60,0	1/1:2,10:12:27.04:261,27,0	1/1:1,15:16:39.06:377,39,0	1/1:22,0:22:58.68:273,59,0	0/0:19,0:19:54.10:0,54,623	1/1:6,0:6:16.79:76,17,0
chr10	82113715	.	TA	T	9862.25	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.211;DP=482;FS=1.574;HRun=9;HaplotypeScore=51.3608;InbreedingCoeff=0.8453;MQ=63.78;MQ0=0;MQRankSum=-3.343;QD=22.41;ReadPosRankSum=1.751;VQSLOD=5.6310;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:60.10:0,60,662	1/1:1,10:11:30.02:274,30,0	0/0:5,0:4:3.01:0,3,35	0/0:12,0:12:14.52:0,15,131	1/1:1,21:22:54.03:494,54,0	1/1:2,19:21:51.03:467,51,0	1/1:0,12:12:27.01:247,27,0	1/1:7,22:29:63.02:577,63,0	1/1:0,7:7:15.01:137,15,0	1/1:4,19:23:57.03:520,57,0	1/1:3,16:19:10.41:350,10,0	1/1:1,10:11:21:192,21,0	1/1:1,17:18:48.02:438,48,0	1/1:3,15:18:36.01:329,36,0	1/1:1,20:21:54.03:493,54,0	1/1:1,18:19:42.02:384,42,0	1/1:1,14:15:39.02:357,39,0	1/1:3,17:20:45.02:412,45,0	1/1:1,15:16:45:406,45,0	1/1:2,17:19:48.02:439,48,0	1/1:0,1:1:3:27,3,0	1/1:0,19:19:54.03:494,54,0	1/1:2,23:25:62.96:576,63,0	1/1:0,6:6:18.01:165,18,0	1/1:1,16:17:42.02:384,42,0	1/1:3,28:31:81.04:740,81,0	1/1:0,23:23:54.03:494,54,0	1/1:0,17:17:51.03:467,51,0
chr10	82113827	.	C	CTA	1054.48	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=3.068;DP=493;FS=46.759;HRun=0;HaplotypeScore=176.0044;InbreedingCoeff=0.9636;MQ=90.42;MQ0=1;MQRankSum=-3.859;QD=21.09;ReadPosRankSum=1.360;VQSLOD=2.2159;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:45.15:0,45,643	0/0:11,0:11:30.10:0,30,428	0/0:25,0:25:66.22:0,66,929	0/0:30,0:30:78.05:0,78,972	0/0:21,0:21:33.11:0,33,471	0/0:21,0:21:45.10:0,45,618	1/1:3,6:9:18.06:329,18,0	0/0:29,0:29:59.90:0,60,830	0/0:17,0:17:42.14:0,42,599	0/0:21,0:21:60.19:0,60,823	0/0:20,0:20:45.15:0,45,641	0/0:16,0:16:21.07:0,21,300	1/1:5,13:16:24.08:438,24,0	1/1:5,7:12:15.05:274,15,0	0/0:22,0:22:36.12:0,36,514	0/0:29,0:29:66.22:0,66,943	0/0:10,0:10:18.06:0,18,257	0/0:6,0:6:15.05:0,15,215	0/0:16,0:16:36.07:0,36,469	0/0:26,0:26:60.20:0,60,858	0/0:15,0:15:18.06:0,18,258	1/1:4,7:11:9.92:166,10,0	0/0:17,0:17:24.08:0,24,343	0/0:7,0:7:15.05:0,15,214	0/0:22,0:22:45.15:0,45,644	0/0:18,0:18:45.05:0,45,581	0/0:22,0:22:54.18:0,54,771	./.
chr10	82114663	.	TAC	T	188.68	PASS	AB=0.882;AC=15;AF=0.441;AN=34;BaseQRankSum=2.149;DP=528;FS=0.000;HRun=0;HaplotypeScore=63.8388;InbreedingCoeff=0.4133;MQ=77.11;MQ0=11;MQRankSum=0.537;QD=1.32;ReadPosRankSum=1.612;VQSLOD=1.1382;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:12:0,12,117	./.	./.	./.	0/0:20,0:21:5.53:0,6,47	./.	./.	0/0:20,0:20:2.13:0,2,5	./.	./.	./.	1/1:15,0:15:5.37:41,5,0	./.	1/1:15,0:17:2.84:14,3,0	1/1:12,0:13:2.84:14,3,0	1/1:17,2:17:6.01:64,6,0	1/1:20,4:24:3.01:32,3,0	1/1:11,0:11:0.47:1,0,0	0/0:13,0:13:3:0,3,28	0/0:18,0:18:2.97:0,3,24	0/0:24,0:24:0:0,0,0	./.	1/1:13,1:14:3.01:32,3,0	0/1:26,2:30:6.16:106,0,6	./.	0/0:22,0:22:6.01:0,6,67	0/0:17,0:16:11.79:0,12,127	0/0:3,0:2:6.02:0,6,80
chr10	82115133	.	GAGACGCAAGGAGC	G	22149.46	PASS	AB=0.533;AC=33;AF=0.589;AN=56;BaseQRankSum=17.104;DP=567;FS=4.584;HRun=0;HaplotypeScore=214.4670;InbreedingCoeff=0.8998;MQ=82.71;MQ0=0;MQRankSum=-16.591;QD=80.54;ReadPosRankSum=4.989;VQSLOD=4.2209;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,8323	1/1:0,9:9:24.08:965,24,0	0/0:20,0:20:54.09:0,54,2615	0/0:20,0:20:57.16:0,57,2914	1/1:1,21:22:45.11:1552,45,0	1/1:1,19:20:51.18:2057,51,0	0/0:24,0:24:69.21:0,69,3738	0/0:37,0:37:96.33:0,96,5104	1/1:1,14:15:39.13:1572,39,0	1/1:0,14:14:42.14:1571,42,0	1/1:1,8:9:12.04:482,12,0	1/1:0,21:21:44.81:1813,45,0	0/0:29,0:29:87.28:0,87,5017	0/0:31,0:31:90.31:0,90,5972	1/1:1,20:21:54.19:2177,54,0	1/1:1,25:26:72.25:2902,72,0	1/1:1,20:21:30.10:1208,30,0	1/1:2,8:10:18.06:726,18,0	0/0:18,0:18:54.17:0,54,2815	0/0:13,0:13:39.13:0,39,2187	1/1:2,17:19:9.03:362,9,0	0/0:23,0:23:69.24:0,69,4233	1/1:1,6:7:12.04:469,12,0	1/1:1,18:19:9.03:363,9,0	1/1:0,18:18:45.15:1804,45,0	0/1:2,14:16:99:1159,0,154	0/0:28,0:28:81.28:0,81,4994	1/1:0,8:8:24.08:968,24,0
chr10	82116698	.	GGGAGAA	G	1027.99	PASS	AB=1.000;AC=21;AF=0.500;AN=42;BaseQRankSum=1.374;DP=271;FS=4.788;HRun=0;HaplotypeScore=64.7552;InbreedingCoeff=0.6567;MQ=79.35;MQ0=0;MQRankSum=-3.851;QD=11.82;ReadPosRankSum=1.224;VQSLOD=1.0219;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:39.09:0,39,1128	1/1:0,1:1:3.01:64,3,0	0/0:23,0:17:22.88:0,23,791	0/1:17,0:12:26.11:26,0,353	./.	1/1:3,3:6:6.02:128,6,0	0/0:25,0:25:57.16:0,57,1709	0/0:11,0:11:12.04:0,12,356	1/1:3,2:5:6.02:129,6,0	1/1:2,1:3:3.01:64,3,0	./.	./.	0/0:15,0:15:30.10:0,30,968	0/0:12,0:12:12.04:0,12,375	1/1:9,3:12:9.03:193,9,0	1/1:7,3:10:6.02:129,6,0	1/1:14,1:15:5.25:85,5,0	./.	0/0:7,0:7:9.03:0,9,270	0/0:7,0:7:15.05:0,15,494	1/1:3,2:5:6.02:127,6,0	0/0:17,0:17:33.08:0,33,1025	./.	1/1:4,2:6:3.01:65,3,0	./.	1/1:4,3:7:9.03:179,9,0	0/0:12,0:12:12.04:0,12,396	./.
chr10	82116738	.	GGGGGGA	G	1362.14	PASS	AC=8;AF=0.160;AN=50;BaseQRankSum=2.676;DP=186;FS=0.000;HRun=0;HaplotypeScore=40.3689;InbreedingCoeff=0.5253;MQ=85.29;MQ0=4;MQRankSum=-4.977;QD=23.09;ReadPosRankSum=4.002;VQSLOD=2.8052;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:2.99:0,3,24	0/0:1,0:1:3.01:0,3,104	0/0:25,0:9:20.49:0,20,180	0/0:24,0:11:26.02:0,26,378	0/0:2,0:2:5.99:0,6,48	0/0:1,0:1:3.01:0,3,76	1/1:1,24:25:48.11:982,48,0	0/0:6,0:6:11.98:0,12,122	0/0:4,0:4:6:0,6,65	0/0:1,0:1:3.01:0,3,78	0/0:2,0:2:5.97:0,6,110	0/0:5,0:5:6.01:0,6,129	1/1:11,0:12:7.98:174,8,0	1/1:4,11:15:15.52:278,16,0	0/0:6,0:6:15.05:0,15,423	0/0:5,0:5:15.05:0,15,440	0/0:12,0:11:14.98:0,15,399	0/0:5,0:5:6:0,6,121	./.	0/0:2,0:2:3:0,3,25	0/0:4,0:4:5.99:0,6,48	1/1:2,5:7:3.48:63,3,0	./.	0/0:3,0:3:5.91:0,6,40	0/0:5,0:5:11.96:0,12,228	0/0:1,0:1:3:0,3,28	0/0:7,0:7:18.03:0,18,435	./.
chr10	82116743	.	GAT	G	145.37	PASS	AC=8;AF=0.160;AN=50;BaseQRankSum=6.467;DP=166;FS=1.898;HRun=0;HaplotypeScore=34.4473;InbreedingCoeff=0.5927;MQ=84.86;MQ0=3;MQRankSum=-5.279;QD=2.46;ReadPosRankSum=4.344;VQSLOD=0.7397;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:4,1:5:9.03:0,9,131	0/0:1,0:1:3.01:0,3,46	0/0:12,0:5:10.73:0,11,90	0/0:16,0:11:23.09:0,23,315	0/0:3,0:3:6.01:0,6,87	0/0:2,0:2:6.02:0,6,87	1/1:24,1:25:39.98:151,40,0	0/0:4,0:4:12.04:0,12,180	0/0:2,0:2:6.02:0,6,90	0/0:2,0:2:6.01:0,6,72	0/0:3,0:3:9.03:0,9,124	0/0:2,1:3:6.02:0,6,88	1/1:11,1:12:6.87:45,7,0	1/1:13,0:15:13.51:72,14,0	0/0:6,0:6:18.06:0,18,243	0/0:6,0:6:14.42:0,14,198	0/0:9,0:8:15.05:0,15,206	0/0:4,0:4:8.99:0,9,108	./.	0/0:2,0:2:3.01:0,3,44	0/0:3,0:3:6:0,6,86	1/1:6,1:7:2.50:9,2,0	./.	0/0:5,0:5:12.04:0,12,162	0/0:5,0:5:14.91:0,15,167	0/0:2,0:2:6.02:0,6,96	0/0:9,0:9:27.04:0,27,339	./.
chr10	82117327	.	T	TTCTC	659.92	PASS	AB=0.974;AC=27;AF=0.587;AN=46;BaseQRankSum=0.536;DP=603;FS=19.371;HRun=0;HaplotypeScore=139.6244;InbreedingCoeff=0.2251;MQ=61.86;MQ0=11;MQRankSum=-0.558;QD=1.67;ReadPosRankSum=-1.039;VQSLOD=0.8693;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:34,8:44:3.71:64,0,4	0/1:13,0:13:0:0,0,0	./.	./.	0/1:29,0:28:0:0,0,0	1/1:24,0:25:2.59:24,3,0	1/1:27,0:26:3.01:42,3,0	./.	1/1:20,0:19:6.42:96,6,0	1/1:21,0:21:6.28:51,6,0	./.	0/0:19,0:19:3.01:0,3,46	1/1:13,0:13:11.90:118,12,0	1/1:21,0:20:7.51:60,8,0	./.	1/1:21,0:20:2.96:19,3,0	0/1:25,0:26:9.42:9,0,87	1/1:21,0:26:5.67:29,6,0	0/0:17,0:16:6.02:0,6,68	0/0:22,0:22:0.28:0,0,1	0/0:24,0:23:6.02:0,6,65	1/1:23,0:23:3.15:49,3,0	1/1:20,0:19:2.84:14,3,0	0/1:25,0:26:65.56:88,0,66	0/0:24,0:24:0.47:0,0,1	0/1:26,0:24:18.87:121,0,19	0/0:13,0:13:8.98:0,9,115	0/1:13,0:11:0:0,0,0
chr10	82117741	.	C	CAGAT	2850.40	PASS	AB=0.915;AC=25;AF=0.521;AN=48;BaseQRankSum=-3.492;DP=604;FS=3.281;HRun=0;HaplotypeScore=134.1779;InbreedingCoeff=0.6288;MQ=69.89;MQ0=4;MQRankSum=-0.448;QD=8.66;ReadPosRankSum=-2.163;VQSLOD=2.7750;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:26:39.08:0,39,510	1/1:7,0:7:3.01:66,3,0	./.	./.	1/1:19,1:30:10.48:73,10,0	0/0:11,0:20:12.01:0,12,112	0/0:21,0:21:15.05:0,15,226	./.	0/0:6,0:10:9.01:0,9,84	1/1:28,0:29:23.81:358,24,0	1/1:25,0:26:1.49:4,1,0	1/1:16,3:19:12.04:277,12,0	0/0:21,0:22:27.08:0,27,389	0/1:18,1:19:51.23:51,0,209	0/0:13,0:22:15.02:0,15,140	0/0:13,0:22:15.02:0,15,139	1/1:25,0:25:11.96:231,12,0	0/0:17,0:18:30.04:0,30,393	1/1:20,1:25:12.01:200,12,0	1/1:19,8:26:15.05:347,15,0	0/0:7,0:11:9.01:0,9,84	0/0:10,0:10:15.05:0,15,220	1/1:14,5:20:11.89:277,12,0	1/1:20,7:27:18.06:416,18,0	1/1:7,10:19:24.08:555,24,0	0/1:27,0:27:52.09:52,0,290	0/1:20,7:27:36.27:130,0,36	./.
chr10	82117983	.	C	CCCTCCCTCTT	54311.36	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-7.793;DP=649;FS=1.495;HRun=0;HaplotypeScore=160.1843;InbreedingCoeff=0.9493;MQ=79.25;MQ0=2;MQRankSum=-13.398;QD=100.95;ReadPosRankSum=2.797;VQSLOD=5.2470;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,3911	1/1:3,8:14:27.05:1200,27,0	0/0:27,0:28:63.44:0,63,1277	0/0:41,0:38:49.07:0,49,1866	1/1:3,19:31:59.74:2386,60,0	1/1:8,16:29:72.12:3157,72,0	1/1:5,6:16:30.06:1315,30,0	1/1:5,5:25:75.26:3010,75,0	1/1:4,14:21:54.14:2647,54,0	1/1:3,16:29:87.30:4152,87,0	1/1:5,15:26:53.88:1939,54,0	1/1:2,7:11:27.09:1303,27,0	1/1:6,10:21:50.74:2224,51,0	1/1:3,10:17:42.10:1921,42,0	1/1:4,19:29:69.15:3302,69,0	1/1:3,11:21:39.13:2032,39,0	1/1:4,11:20:42.06:1940,42,0	1/1:0,6:11:18.06:900,18,0	1/1:7,3:21:60.17:2200,60,0	1/1:8,16:29:71.85:2557,72,0	1/1:0,4:12:11.91:366,12,0	1/1:4,17:24:59.90:2162,60,0	1/1:5,13:23:47.82:1901,48,0	1/1:3,9:15:27.01:1113,27,0	1/1:5,16:26:60.03:2582,60,0	1/1:4,23:33:99:4679,99,0	1/1:3,19:26:66.10:3025,66,0	1/1:0,0:5:6.02:300,6,0
chr10	82118883	.	TAC	T	716.16	PASS	AB=0.973;AC=40;AF=0.741;AN=54;BaseQRankSum=7.746;DP=622;FS=0.000;HRun=0;HaplotypeScore=135.3883;InbreedingCoeff=0.0723;MQ=70.70;MQ0=17;MQRankSum=-5.436;QD=1.34;ReadPosRankSum=0.167;VQSLOD=2.2454;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,6:25:71.38:71,0,330	0/1:11,0:11:13.53:29,0,14	0/1:42,1:32:19.70:20,0,137	0/0:40,0:22:7.43:0,7,41	1/1:17,0:17:1.93:5,2,0	1/1:15,0:14:13.14:61,13,0	1/1:28,0:28:5.59:26,6,0	0/0:33,0:29:6.01:0,6,62	1/1:19,0:19:11.19:53,11,0	1/1:28,0:28:9.44:47,9,0	0/1:9,0:9:15.01:15,0,17	1/1:21,0:21:16.79:79,17,0	0/1:17,0:17:10.81:11,0,53	1/1:9,0:9:7.94:47,8,0	0/1:30,0:29:2.17:59,0,2	1/1:24,0:24:11.19:53,11,0	0/0:14,0:14:3.41:0,3,21	1/1:25,0:24:2.80:13,3,0	0/1:16,0:16:0.28:9,0,0	1/1:17,0:17:2.80:13,3,0	1/1:36,0:35:0.85:9,1,0	1/1:19,0:19:5.93:27,6,0	1/1:17,0:17:2.74:13,3,0	1/1:29,0:29:2.57:10,3,0	1/1:26,0:26:16.21:73,16,0	0/1:20,0:20:26.84:27,0,37	1/1:34,0:34:18.84:91,19,0	./.
chr10	82119248	.	TC	T	870.11	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.257;DP=702;FS=2.703;HRun=1;HaplotypeScore=75.4518;InbreedingCoeff=0.9976;MQ=75.68;MQ0=0;MQRankSum=-2.274;QD=33.47;ReadPosRankSum=0.433;VQSLOD=3.4415;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.25:0,81,1270	0/0:8,0:8:24.08:0,24,380	0/0:22,0:22:60.20:0,60,906	0/0:21,0:21:48.14:0,48,719	0/0:34,0:34:99:0,99,1535	0/0:27,0:27:78.27:0,78,1244	1/1:0,26:26:69.23:965,69,0	0/0:32,0:32:96.31:0,96,1480	0/0:26,0:26:78.23:0,78,1177	0/0:34,0:34:99:0,99,1549	0/0:14,0:14:36.12:0,36,575	0/0:22,0:22:66.18:0,66,985	0/0:31,0:31:93.30:0,93,1426	0/0:22,0:22:66.20:0,66,1014	0/0:28,0:28:84.29:0,84,1343	0/0:27,0:27:81.28:0,81,1295	0/0:29,0:29:72.10:0,72,1258	0/0:16,0:16:48.14:0,48,731	0/0:15,0:15:45.15:0,45,720	0/0:23,0:23:69.22:0,69,1067	0/0:38,0:38:99:0,114,1792	0/0:24,0:24:72.21:0,72,1102	0/0:25,0:25:72.25:0,72,1150	0/0:26,0:26:78.21:0,78,1194	0/0:26,0:26:69.24:0,69,1099	0/0:28,0:28:84.29:0,84,1341	0/0:36,0:34:99:0,108,1726	0/0:11,0:11:33.11:0,33,527
chr10	82119742	.	T	TAAAAAA	7612.21	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=0.792;DP=577;FS=7.267;HRun=14;HaplotypeScore=141.6281;InbreedingCoeff=0.8838;MQ=71.48;MQ0=0;MQRankSum=-7.415;QD=21.69;ReadPosRankSum=-4.561;VQSLOD=0.8459;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:36:64.80:0,65,1000	1/1:6,5:14:27.07:507,27,0	0/0:27,0:24:24.80:0,25,225	0/1:15,0:12:12.79:13,0,30	1/1:13,10:27:52.87:842,53,0	1/1:10,1:24:24.08:554,24,0	1/1:8,0:19:18.11:275,18,0	0/0:27,0:32:10.59:0,11,674	1/1:11,1:25:18.06:381,18,0	1/1:12,0:14:24.06:497,24,0	1/1:6,1:18:17.99:298,18,0	1/1:8,1:16:24.05:539,24,0	0/0:14,0:24:38.24:0,38,481	0/0:7,0:24:50.84:0,51,613	1/1:9,5:17:21.17:446,21,0	1/1:5,12:19:30.10:714,30,0	1/1:9,0:22:12.96:239,13,0	1/1:16,1:16:23.06:377,23,0	0/0:15,0:16:29.56:0,30,451	0/0:22,0:22:41.27:0,41,652	1/1:7,0:6:11.94:146,12,0	0/0:5,0:20:41.75:0,42,490	1/1:10,0:18:27.54:326,28,0	1/1:9,10:25:24.55:465,25,0	1/1:9,0:16:9.03:244,9,0	1/1:10,0:27:49.88:678,50,0	0/0:23,0:24:44.08:0,44,664	1/1:1,0:7:7.82:74,8,0
chr10	82120911	.	CA	C	2228.99	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.415;DP=614;FS=3.171;HRun=9;HaplotypeScore=70.2891;InbreedingCoeff=0.9892;MQ=79.69;MQ0=1;MQRankSum=-1.187;QD=20.26;ReadPosRankSum=-2.273;VQSLOD=3.5538;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.17:0,72,799	0/0:9,0:9:24.06:0,24,267	0/0:16,0:16:33.06:0,33,349	0/0:14,0:13:12.87:0,13,139	0/0:29,0:29:81.22:0,81,916	0/0:23,0:23:60.11:0,60,665	0/0:4,0:27:59.84:0,60,314	1/1:7,21:28:63:568,63,0	0/0:17,0:17:45.13:0,45,519	0/0:31,0:30:81.11:0,81,886	0/0:27,0:29:83.89:0,84,905	0/0:20,0:20:51.15:0,51,588	0/0:3,0:21:31.28:0,31,159	0/0:0,0:7:17.04:0,17,87	0/0:25,0:25:66.20:0,66,762	0/0:24,0:24:66.17:0,66,744	0/0:22,0:22:60.18:0,60,692	0/0:13,0:13:39.09:0,39,437	1/1:4,28:32:86.98:780,87,0	1/1:6,23:29:69.01:630,69,0	0/0:16,0:18:47.97:0,48,534	0/0:4,0:24:51.49:0,51,275	0/0:28,0:28:78.14:0,78,833	0/0:12,0:12:32.76:0,33,348	0/0:24,0:24:66.17:0,66,738	0/0:30,0:30:79.10:0,79,481	1/1:1,20:21:45.02:412,45,0	0/0:15,0:15:32.66:0,33,223
chr10	82121538	.	A	AGGCGG	393.66	PASS	AB=0.949;AC=15;AF=0.278;AN=54;BaseQRankSum=6.669;DP=426;FS=0.728;HRun=0;HaplotypeScore=123.3357;InbreedingCoeff=-0.1331;MQ=82.13;MQ0=0;MQRankSum=-2.903;QD=2.16;ReadPosRankSum=-0.655;VQSLOD=1.9005;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:57.17:0,57,1045	0/1:6,0:6:9.35:9,0,21	0/0:19,0:19:54.14:0,54,941	0/0:15,0:15:21.05:0,21,380	0/1:16,0:16:15.50:45,0,16	0/1:18,2:24:30.78:126,0,31	0/0:17,0:17:0.12:0,0,108	0/0:23,0:23:36.06:0,36,515	0/1:11,0:16:13.58:14,0,53	0/0:16,0:16:2.46:0,2,19	0/0:15,0:15:0.76:0,1,2	0/0:9,0:9:0:0,0,0	0/1:13,0:13:8.56:36,0,9	1/1:18,0:18:1.49:35,1,0	0/1:10,0:10:34.70:53,0,35	0/1:7,0:7:23.53:24,0,39	0/1:12,0:13:53.12:56,0,53	0/1:12,0:12:0.14:0,0,79	0/0:19,0:19:42.13:0,42,812	0/0:20,0:20:54.16:0,54,1019	0/0:8,0:8:5.79:0,6,49	0/1:13,0:13:14.93:30,0,15	1/1:14,0:16:0.41:1,0,0	0/1:17,0:18:22:97,0,22	0/0:16,0:16:0.47:0,0,1	0/0:18,0:19:2.62:0,3,26	0/0:23,0:22:66.19:0,66,1286	./.
chr10	82123950	.	GAA	G	17792.13	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=15.797;DP=673;FS=2.039;HRun=2;HaplotypeScore=81.7326;InbreedingCoeff=0.9998;MQ=84.10;MQ0=0;MQRankSum=-2.045;QD=45.39;ReadPosRankSum=6.480;VQSLOD=4.6724;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.28:0,84,1670	1/1:0,13:13:39.13:636,39,0	0/0:19,0:19:51.14:0,51,962	0/0:20,0:20:57.14:0,57,1094	1/1:0,33:33:96.33:1564,96,0	1/1:0,27:27:75.26:1224,75,0	0/0:18,0:18:54.19:0,54,1097	0/0:32,0:32:96.33:0,96,1947	1/1:0,27:27:78.27:1272,78,0	1/1:0,36:36:99:1759,108,0	1/1:0,17:17:45.15:734,45,0	1/1:0,23:23:69.24:1126,69,0	0/0:26,0:26:78.27:0,78,1583	0/0:23,0:23:69.24:0,69,1399	1/1:0,36:36:96.33:1566,96,0	1/1:0,20:20:54.18:881,54,0	1/1:0,24:24:66.23:1076,66,0	1/1:0,18:18:48.16:781,48,0	0/0:21,0:21:63.19:0,63,1215	0/0:39,0:39:99:0,114,2317	1/1:0,14:14:39.13:636,39,0	0/0:27,0:27:81.26:0,81,1572	1/1:0,25:25:59.94:966,60,0	1/1:0,11:11:27.09:440,27,0	1/1:0,23:23:57.19:930,57,0	1/1:0,35:35:99:1711,105,0	0/0:28,0:28:84.29:0,84,1707	1/1:0,10:10:30.10:489,30,0
chr10	82124536	.	GAGA	G	3083.67	PASS	AB=0.519;AC=5;AF=0.093;AN=54;BaseQRankSum=-4.630;DP=691;FS=2.210;HRun=0;HaplotypeScore=166.6831;InbreedingCoeff=0.8078;MQ=77.77;MQ0=0;MQRankSum=-1.711;QD=38.55;ReadPosRankSum=3.765;VQSLOD=4.4416;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,114,2604	0/0:9,0:9:27.09:0,27,596	0/0:29,0:29:81.25:0,81,1749	0/0:24,0:24:51.15:0,51,953	0/0:19,0:19:50.96:0,51,1118	0/0:18,0:18:54.16:0,54,1179	0/0:24,0:24:66.23:0,66,1511	0/0:27,0:27:78.25:0,78,1702	0/0:17,0:17:44.83:0,45,1037	0/0:24,0:24:72.20:0,72,1577	0/0:25,0:25:63.12:0,63,1358	0/0:14,0:14:42.13:0,42,925	1/1:1,25:26:66.70:1126,67,0	0/1:2,25:27:8.97:911,0,9	0/0:32,0:32:84.29:0,84,1937	0/0:23,0:23:57.20:0,57,1313	0/0:37,0:37:99:0,108,2288	0/0:24,0:24:63.19:0,63,1404	0/0:32,0:32:87.27:0,87,1874	0/0:23,0:23:69.24:0,69,1591	0/0:47,0:47:99:0,135,2861	1/1:1,26:27:69.24:1176,69,0	0/0:24,0:24:66.23:0,66,1516	0/0:35,0:35:99:0,102,2351	0/0:20,0:20:51.17:0,51,1134	0/0:25,0:24:69.07:0,69,1591	0/0:17,0:17:48.16:0,48,1025	./.
chr10	82124547	.	C	CT	11663.31	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=2.346;DP=701;FS=15.384;HRun=7;HaplotypeScore=106.8451;InbreedingCoeff=0.9949;MQ=81.92;MQ0=0;MQRankSum=2.198;QD=29.98;ReadPosRankSum=3.736;VQSLOD=3.3919;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:42:99:0,109,1026	1/1:1,9:10:24.07:290,24,0	0/0:32,0:32:47.93:0,48,508	0/0:21,0:21:33.49:0,33,284	1/1:2,18:20:42.13:507,42,0	1/1:2,15:17:45.14:544,45,0	0/0:26,0:26:75.09:0,75,713	0/0:29,0:29:60.08:0,60,579	1/1:2,13:15:32.77:398,33,0	1/1:5,15:20:45.14:544,45,0	1/1:4,16:20:39.12:471,39,0	1/1:3,15:18:45.14:544,45,0	0/0:25,0:25:69.11:0,69,666	0/0:25,1:26:23.85:0,24,514	1/1:2,30:32:75.23:906,75,0	1/1:1,24:25:60.18:722,60,0	1/1:3,31:34:87.27:1051,87,0	1/1:2,23:25:60.18:725,60,0	0/0:32,0:32:93.14:0,93,898	0/0:24,0:24:69.11:0,69,666	1/1:2,42:44:99:1486,123,0	0/0:36,0:36:81.06:0,81,760	1/1:0,24:24:66.20:796,66,0	1/1:3,35:38:99:1196,99,0	1/1:2,18:20:48.15:580,48,0	1/1:1,21:22:63.19:761,63,0	0/0:19,0:19:57.09:0,57,550	1/1:0,4:4:12.04:145,12,0
chr10	82124802	.	C	CTTCACGGTAAAAAGGATGCTTGTGCAGG	76045.75	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=8.475;DP=564;FS=3.492;HRun=0;HaplotypeScore=385.3505;InbreedingCoeff=0.9747;MQ=77.12;MQ0=0;MQRankSum=-18.423;QD=219.79;ReadPosRankSum=3.670;VQSLOD=4.1883;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.28:0,87,5778	1/1:6,2:9:24.04:2093,24,0	0/0:15,0:15:39.13:0,39,1736	0/0:22,0:22:54.09:0,54,1830	1/1:17,1:19:39.13:3524,39,0	1/1:20,2:23:60.21:5667,60,0	0/0:15,0:15:45.15:0,45,2990	0/0:21,0:21:54.18:0,54,2795	1/1:17,2:21:60.21:6269,60,0	1/1:19,1:20:51.13:3861,51,0	1/1:22,2:24:60.63:5483,61,0	1/1:20,1:26:66.23:6463,66,0	0/0:27,0:27:72.16:0,72,4110	0/0:21,0:21:63.21:0,63,3682	1/1:28,1:30:90.31:7723,90,0	1/1:19,3:22:63.17:6457,63,0	1/1:23,2:27:69.24:6087,69,0	1/1:12,1:14:39.09:3248,39,0	0/0:13,0:13:39.13:0,39,1983	0/0:17,0:17:39.13:0,39,2572	1/1:23,0:23:51.17:4045,51,0	0/0:14,0:14:36.12:0,36,2171	1/1:16,1:18:42.62:3388,43,0	1/1:24,0:30:57.20:4505,57,0	1/1:18,1:20:30.10:2701,30,0	1/1:15,3:19:51.12:4367,51,0	0/0:23,0:23:69.24:0,69,4215	1/1:1,0:1:3.01:166,3,0
chr10	82124924	.	AG	A	9899.06	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=17.354;DP=644;FS=0.000;HRun=6;HaplotypeScore=101.4210;InbreedingCoeff=0.9984;MQ=68.45;MQ0=0;MQRankSum=-5.685;QD=28.45;ReadPosRankSum=2.940;VQSLOD=4.8332;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1532	1/1:0,6:6:18.05:193,18,0	0/0:28,0:27:72.22:0,72,921	0/0:19,0:19:44.88:0,45,517	1/1:4,16:19:51.13:548,51,0	1/1:2,20:23:63.16:675,63,0	0/0:23,0:23:60.19:0,60,785	0/0:25,0:25:69.21:0,69,892	1/1:3,18:21:60.13:635,60,0	1/1:5,19:24:57.14:612,57,0	1/1:2,14:16:39.08:411,39,0	1/1:1,18:19:57.14:612,57,0	0/0:27,0:27:78.25:0,78,1026	0/0:28,0:28:75.23:0,75,969	1/1:2,29:31:80.99:868,81,0	1/1:1,19:20:60.13:636,60,0	1/1:1,31:32:90.23:966,90,0	1/1:1,9:10:27.07:290,27,0	0/0:17,0:17:42.14:0,42,551	0/0:28,0:28:75.24:0,75,973	1/1:2,33:35:90.23:967,90,0	0/0:29,0:29:72.23:0,72,943	1/1:2,15:17:48.11:510,48,0	1/1:2,19:21:57.14:612,57,0	1/1:6,13:19:45.06:463,45,0	1/1:5,21:26:60.15:645,60,0	0/0:32,0:32:84.25:0,84,1075	1/1:0,8:8:24.06:257,24,0
chr10	82125001	.	ATT	A	8790.99	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-0.686;DP=546;FS=0.000;HRun=11;HaplotypeScore=84.2944;InbreedingCoeff=0.9827;MQ=68.18;MQ0=0;MQRankSum=-2.072;QD=28.18;ReadPosRankSum=4.168;VQSLOD=5.2338;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:99:0,99,1506	1/1:4,5:9:18:181,18,0	0/0:16,0:16:11.57:0,12,99	0/0:11,0:12:7.64:0,8,152	1/1:0,22:22:66.17:703,66,0	1/1:5,21:26:63.12:663,63,0	0/0:3,0:19:39.07:0,39,389	0/0:12,0:30:60.03:0,60,612	1/1:0,16:16:42.11:447,42,0	1/1:2,19:21:57.09:597,57,0	1/1:0,17:18:53.83:543,54,0	1/1:1,14:15:42.07:436,42,0	0/0:17,0:18:45.13:0,45,652	0/0:9,0:9:27.09:0,27,416	1/1:2,20:22:60.14:639,60,0	1/1:2,19:21:57.14:607,57,0	1/1:5,19:24:57.13:607,57,0	1/1:0,12:12:36.09:383,36,0	0/0:8,0:26:63.07:0,63,606	0/0:4,0:21:51.05:0,51,492	1/1:2,12:14:39.10:415,39,0	0/0:19,0:19:54.16:0,54,790	1/1:0,15:15:39.09:415,39,0	1/1:4,13:17:42.06:435,42,0	1/1:0,17:17:51.13:543,51,0	1/1:3,23:26:69.17:733,69,0	0/0:6,0:27:57.09:0,57,561	1/1:3,14:17:42.08:447,42,0
chr10	82126594	.	A	AT	10973.52	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-14.493;DP=591;FS=1.413;HRun=7;HaplotypeScore=51.7791;InbreedingCoeff=0.9743;MQ=62.02;MQ0=2;MQRankSum=-0.638;QD=31.44;ReadPosRankSum=3.522;VQSLOD=4.7453;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.13:0,87,838	1/1:0,13:13:39.12:471,39,0	0/0:11,0:8:21.03:0,21,203	0/0:12,0:9:25.41:0,25,213	1/1:3,23:26:69.21:833,69,0	1/1:2,19:21:54.17:652,54,0	0/0:22,0:22:60.10:0,60,579	0/0:30,0:30:81.12:0,81,781	1/1:0,12:12:33.10:399,33,0	1/1:1,25:26:75.23:903,75,0	1/1:3,14:17:45.14:535,45,0	1/1:2,22:24:66.19:787,66,0	0/0:24,0:24:66.10:0,66,636	0/0:22,0:22:63.09:0,63,603	1/1:2,13:15:36.11:435,36,0	1/1:2,26:28:81.24:969,81,0	1/1:2,22:24:61.74:729,62,0	1/1:2,17:19:45.14:544,45,0	0/0:19,0:19:45.07:0,45,434	0/0:26,0:26:75.12:0,75,724	1/1:3,15:18:45.14:544,45,0	0/0:22,0:22:66.11:0,66,637	1/1:4,19:23:54.16:649,54,0	1/1:2,15:17:42.13:507,42,0	1/1:2,31:33:84.26:1015,84,0	1/1:2,27:29:81.23:965,81,0	0/0:22,0:21:60.07:0,60,572	1/1:3,1:4:3.01:36,3,0
chr10	82126983	.	A	AAC	20489.97	PASS	AB=0.542;AC=32;AF=0.571;AN=56;BaseQRankSum=0.947;DP=709;FS=4.961;HRun=0;HaplotypeScore=98.9053;InbreedingCoeff=0.8964;MQ=59.39;MQ0=0;MQRankSum=2.462;QD=48.55;ReadPosRankSum=4.558;VQSLOD=5.9895;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1723	1/1:1,9:10:24.08:449,24,0	0/0:23,0:17:45.10:0,45,604	0/0:34,0:30:84.26:0,84,1197	1/1:1,27:27:66.23:1236,66,0	1/1:0,21:21:60.21:1123,60,0	0/0:29,0:29:84.28:0,84,1237	0/0:31,0:31:90.29:0,90,1291	1/1:2,22:25:57.20:1057,57,0	1/1:4,32:36:99:1842,99,0	1/1:0,17:17:48.16:899,48,0	1/1:0,29:29:78.27:1461,78,0	0/0:29,0:29:84.28:0,84,1237	0/0:19,0:19:51.15:0,51,727	1/1:1,45:48:99:2407,129,0	1/1:4,29:33:87.30:1629,87,0	1/1:1,26:27:75.26:1403,75,0	0/1:2,14:16:2:688,0,2	0/0:15,0:15:42.14:0,42,614	0/0:25,0:25:72.20:0,72,999	1/1:4,36:40:99:1890,102,0	0/0:20,0:20:60.20:0,60,883	1/1:2,19:21:54.19:1011,54,0	1/1:2,17:19:48.16:899,48,0	1/1:2,16:18:4.02:799,4,0	1/1:1,22:23:66.21:1224,66,0	0/0:22,0:22:66.22:0,66,964	0/1:2,9:11:0.18:473,0,0
chr10	82128352	.	GA	G	2795.37	PASS	AB=0.687;AC=37;AF=0.661;AN=56;BaseQRankSum=8.861;DP=466;FS=5.210;HRun=14;HaplotypeScore=73.8160;InbreedingCoeff=0.4896;MQ=55.92;MQ0=10;MQRankSum=0.267;QD=8.32;ReadPosRankSum=3.255;VQSLOD=3.1007;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,1:25:21.24:0,21,346	1/1:2,3:5:5.94:41,6,0	0/0:9,0:2:6:0,6,50	0/0:9,0:5:0.17:0,0,20	1/1:6,20:28:30.83:327,31,0	1/1:7,16:23:29.72:206,30,0	0/1:11,3:14:28.71:29,0,190	0/0:15,0:10:17.99:0,18,160	0/1:5,17:22:31.17:201,0,31	1/1:6,8:16:29.67:181,30,0	0/1:11,7:20:33.45:139,0,33	1/1:7,7:15:25.77:169,26,0	1/1:11,2:13:17.60:115,18,0	1/1:8,5:16:25.38:144,25,0	1/1:9,12:21:35.60:247,36,0	1/1:5,12:17:12.48:184,12,0	1/1:3,8:11:17.78:123,18,0	0/1:8,9:15:12.69:135,0,13	0/0:20,0:18:32.62:0,33,291	0/0:23,2:25:13.72:0,14,395	1/1:0,5:5:11.90:82,12,0	1/1:8,9:16:4.86:175,5,0	1/1:4,3:7:5.93:41,6,0	0/1:12,12:22:2.60:174,0,3	1/1:7,10:18:28.52:191,29,0	1/1:3,0:14:21.65:62,22,0	0/0:25,1:26:15.89:0,16,443	1/1:1,0:11:6.11:17,6,0
chr10	82128424	.	A	AT	1374.52	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.985;DP=493;FS=6.314;HRun=5;HaplotypeScore=61.9055;InbreedingCoeff=0.9802;MQ=57.17;MQ0=7;MQRankSum=1.987;QD=29.25;ReadPosRankSum=1.215;VQSLOD=4.1224;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:39.10:0,39,419	0/0:10,0:10:27.07:0,27,290	0/0:21,0:5:15.04:0,15,161	0/0:18,0:13:25.99:0,26,253	0/0:33,0:33:87.21:0,87,935	0/0:16,0:16:33.05:0,33,337	0/0:12,0:12:33.08:0,33,355	0/0:29,0:29:75.18:0,75,799	0/0:25,0:25:66.17:0,66,709	0/0:13,0:13:36.09:0,36,387	0/0:21,0:21:63.16:0,63,677	0/0:15,0:15:39.10:0,39,419	1/1:2,13:15:39.13:513,39,0	1/1:3,13:16:33.11:432,33,0	0/0:18,0:18:45.11:0,45,484	0/0:15,0:15:33.08:0,33,355	0/0:14,0:14:36:0,36,353	0/0:12,0:12:29.94:0,30,306	0/0:31,0:24:60.10:0,60,619	0/0:19,0:19:57.12:0,57,603	0/0:7,0:7:21.05:0,21,226	1/1:0,16:15:45.10:573,45,0	0/0:16,0:16:45.09:0,45,475	0/0:13,0:13:27.06:0,27,290	0/0:18,0:18:48.12:0,48,516	0/0:20,0:20:57.14:0,57,613	0/0:24,0:24:69.15:0,69,733	0/0:10,0:10:12.03:0,12,129
chr10	82130284	.	GGCA	G	15108.50	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=17.329;DP=577;FS=4.133;HRun=0;HaplotypeScore=108.1432;InbreedingCoeff=0.9975;MQ=83.77;MQ0=0;MQRankSum=-5.266;QD=49.37;ReadPosRankSum=5.115;VQSLOD=7.1984;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,2595	1/1:0,11:11:30.10:558,30,0	0/0:16,0:16:48.16:0,48,1148	0/0:24,0:24:69.24:0,69,1641	1/1:0,18:18:42.11:771,42,0	1/1:0,18:18:45.15:828,45,0	0/0:17,0:17:51.18:0,51,1256	0/0:42,0:42:99:0,123,2968	1/1:0,18:18:54.19:1000,54,0	1/1:0,16:16:48.16:892,48,0	1/1:0,10:10:30.10:556,30,0	1/1:1,21:22:60.21:1113,60,0	0/0:23,0:23:66.22:0,66,1559	0/0:22,0:22:66.23:0,66,1619	1/1:0,28:28:72.25:1341,72,0	1/1:1,30:31:90.31:1665,90,0	1/1:0,22:22:60.21:1118,60,0	1/1:0,6:6:18.06:335,18,0	0/0:18,0:18:54.19:0,54,1295	0/0:28,0:28:84.29:0,84,2069	1/1:0,20:20:41.97:777,42,0	0/0:24,0:24:69.24:0,69,1664	1/1:0,13:13:36.12:666,36,0	1/1:0,26:26:51.14:928,51,0	1/1:0,22:22:63.22:1164,63,0	1/1:0,19:19:57.20:1062,57,0	0/0:21,0:21:63.22:0,63,1542	1/1:0,6:6:18.06:335,18,0
chr10	82131988	.	AGAAT	A	1809.05	PASS	AB=0.978;AC=12;AF=0.214;AN=56;BaseQRankSum=7.666;DP=728;FS=0.570;HRun=0;HaplotypeScore=121.0985;InbreedingCoeff=0.7701;MQ=73.30;MQ0=4;MQRankSum=1.755;QD=10.11;ReadPosRankSum=-0.876;VQSLOD=3.0005;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:42.14:0,42,920	0/0:10,0:10:15.05:0,15,354	0/0:33,0:29:12.88:0,13,224	0/0:34,0:27:8.99:0,9,124	0/0:38,1:39:25.29:0,25,1474	0/0:26,0:26:54.17:0,54,1231	1/1:9,6:15:12.04:188,12,0	1/1:31,3:34:9.03:134,9,0	0/0:37,1:38:34.34:0,34,1737	0/0:41,0:41:63.15:0,63,1294	0/1:21,1:22:7.85:8,0,682	0/1:30,0:30:1.78:2,0,933	0/0:29,0:29:54.19:0,54,1246	0/0:33,0:33:57.20:0,57,1341	0/0:23,0:23:39.13:0,39,891	0/0:36,0:36:60.21:0,60,1396	0/0:21,0:21:42.14:0,42,968	0/0:21,0:21:21.07:0,21,458	1/1:13,4:17:12.04:183,12,0	1/1:11,16:27:42.14:657,42,0	0/0:14,0:34:39.13:0,39,681	0/0:17,1:18:33.11:0,33,759	0/0:25,0:25:48.15:0,48,1065	0/0:18,0:18:21.07:0,21,496	0/0:6,0:6:9.03:0,9,213	0/0:25,1:37:28.32:0,28,1207	1/1:16,16:34:54.17:807,54,0	0/0:4,0:5:9.03:0,9,134
chr10	82132685	.	TG	T	14883.51	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=16.407;DP=726;FS=5.523;HRun=2;HaplotypeScore=83.9757;InbreedingCoeff=1.0000;MQ=89.23;MQ0=0;MQRankSum=-3.099;QD=35.61;ReadPosRankSum=4.535;VQSLOD=5.3277;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.26:0,78,1160	1/1:0,11:11:33.11:429,33,0	0/0:31,0:31:92.49:0,92,1273	0/0:22,0:22:47.69:0,48,735	1/1:1,38:39:99:1400,108,0	1/1:0,36:36:90.29:1168,90,0	0/0:17,0:17:48.15:0,48,699	0/0:39,0:39:99:0,108,1582	1/1:0,20:20:54.18:701,54,0	1/1:0,37:37:99:1402,108,0	1/1:1,21:22:60.19:779,60,0	1/1:1,20:21:54.18:701,54,0	0/0:29,0:29:87.27:0,87,1277	0/0:25,0:25:69.22:0,69,1007	1/1:1,17:18:51.17:662,51,0	1/1:0,18:18:54.18:701,54,0	1/1:0,27:27:75.24:973,75,0	1/1:0,19:19:57.16:724,57,0	0/0:20,0:20:60.19:0,60,875	0/0:35,0:35:99:0,105,1574	1/1:3,20:23:59.22:746,59,0	0/0:33,0:33:99:0,99,1480	1/1:1,30:31:87.28:1127,87,0	1/1:0,25:25:69.22:894,69,0	1/1:0,28:28:75.24:974,75,0	1/1:2,26:28:78.23:995,78,0	0/0:31,0:31:93.30:0,93,1374	1/1:0,15:15:39.13:506,39,0
chr10	82133079	.	TG	T	14593.47	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=18.879;DP=630;FS=7.993;HRun=1;HaplotypeScore=105.7592;InbreedingCoeff=0.9979;MQ=74.03;MQ0=0;MQRankSum=-0.481;QD=39.34;ReadPosRankSum=4.983;VQSLOD=4.5208;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,168,2424	1/1:0,9:9:24.08:336,24,0	0/0:9,0:9:17.04:0,17,248	0/0:10,0:11:23.55:0,24,282	1/1:0,19:19:51.17:713,51,0	1/1:0,23:23:69.23:964,69,0	0/0:27,0:27:81.19:0,81,1239	0/0:19,0:19:57.19:0,57,888	1/1:0,24:24:72.24:1007,72,0	1/1:0,21:21:63.17:829,63,0	1/1:0,20:20:60.20:834,60,0	1/1:0,20:20:51.17:713,51,0	0/0:16,0:16:48.16:0,48,767	0/0:28,0:28:84.26:0,84,1288	1/1:0,20:20:57.19:796,57,0	1/1:0,29:29:81.27:1132,81,0	1/1:0,39:39:99:1590,114,0	1/1:0,22:22:57.16:772,57,0	0/0:14,0:14:42.12:0,42,612	0/0:29,0:29:81.25:0,81,1247	1/1:0,29:29:87.29:1216,87,0	0/0:22,0:22:66.21:0,66,1028	1/1:0,17:17:45.15:627,45,0	1/1:0,29:29:81.27:1132,81,0	1/1:0,17:17:42.14:586,42,0	1/1:0,21:21:63.18:843,63,0	0/0:28,0:28:84.26:0,84,1305	1/1:0,12:12:36.12:502,36,0
chr10	82133722	.	G	GTCA	19554.37	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=15.310;DP=715;FS=4.344;HRun=0;HaplotypeScore=151.3658;InbreedingCoeff=0.9944;MQ=88.48;MQ0=0;MQRankSum=-8.994;QD=49.26;ReadPosRankSum=4.621;VQSLOD=6.9650;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,2081	1/1:0,8:8:21.07:457,21,0	0/0:31,0:31:54.16:0,54,1117	0/0:28,0:28:72.24:0,72,1119	1/1:1,24:25:50.84:1008,51,0	1/1:4,18:22:51.17:1085,51,0	0/0:25,0:25:75.24:0,75,1166	0/0:31,0:31:75.24:0,75,1146	1/1:1,20:23:60.21:1303,60,0	1/1:8,23:32:81.28:1731,81,0	1/1:2,17:19:51.18:1111,51,0	1/1:4,29:34:75.12:1553,75,0	0/0:20,0:20:54.18:0,54,853	0/0:22,0:22:60.20:0,60,951	1/1:3,23:27:63.22:1348,63,0	1/1:4,28:33:66.23:1440,66,0	1/1:6,25:32:63.22:1374,63,0	1/1:4,12:16:33.11:720,33,0	0/0:17,0:17:42.13:0,42,644	0/0:32,0:32:90.31:0,90,1425	1/1:3,16:19:36.02:736,36,0	0/0:28,0:28:72.25:0,72,1139	1/1:2,25:27:72.25:1570,72,0	1/1:3,9:12:21.07:458,21,0	1/1:2,34:36:84.29:1832,84,0	1/1:4,24:28:75.25:1564,75,0	0/0:38,0:38:99:0,114,1805	1/1:0,4:4:12.04:262,12,0
chr10	82134375	.	T	TGG	1689.84	PASS	AB=0.792;AC=14;AF=0.250;AN=56;BaseQRankSum=-5.057;DP=636;FS=3.938;HRun=9;HaplotypeScore=145.9826;InbreedingCoeff=0.8336;MQ=72.47;MQ0=0;MQRankSum=0.808;QD=10.24;ReadPosRankSum=-5.076;VQSLOD=-0.2515;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:89.68:0,90,924	0/0:8,0:8:24.06:0,24,255	0/0:17,0:18:33.06:0,33,345	0/1:22,0:21:5.15:5,0,332	0/0:27,0:27:78.20:0,78,830	0/0:23,0:22:54.08:0,54,574	0/0:24,0:24:66.11:0,66,686	1/1:8,13:24:41.47:430,41,0	0/0:28,0:28:78.18:0,78,822	0/0:28,0:28:75.17:0,75,787	0/0:11,0:11:33.08:0,33,351	0/0:23,0:23:60.08:0,60,623	0/1:4,0:14:11.41:40,0,11	1/1:5,0:23:34.93:120,35,0	0/0:38,0:38:96.23:0,96,1021	0/0:30,0:30:81.13:0,81,845	0/0:28,0:28:75.13:0,75,789	0/0:14,0:14:36.09:0,36,383	1/1:11,7:18:20.95:186,21,0	1/1:12,6:20:25.80:276,26,0	0/0:26,0:26:56.93:0,57,590	1/1:5,0:17:24.95:86,25,0	0/0:31,0:31:81.11:0,81,862	0/0:17,0:17:48.12:0,48,511	0/0:28,0:28:72.12:0,72,766	0/0:27,0:27:78.15:0,78,818	1/1:5,19:27:55.35:738,55,0	0/0:8,0:8:18.01:0,18,191
chr10	82134921	.	TA	T	11678.35	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=12.915;DP=587;FS=0.644;HRun=2;HaplotypeScore=58.2619;InbreedingCoeff=0.9962;MQ=82.23;MQ0=0;MQRankSum=-1.057;QD=33.85;ReadPosRankSum=5.459;VQSLOD=4.6040;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.21:0,72,1011	1/1:0,8:8:18.02:214,18,0	0/0:19,0:19:47.99:0,48,595	0/0:13,0:13:33.09:0,33,397	1/1:0,33:33:90.05:1098,90,0	1/1:0,27:27:72.23:932,72,0	0/0:17,0:17:51.17:0,51,745	0/0:26,0:26:78.24:0,78,1092	1/1:0,15:15:45.15:583,45,0	1/1:0,35:35:99:1336,105,0	1/1:1,23:24:66.09:814,66,0	1/1:0,13:13:36.12:466,36,0	0/0:28,0:28:81.22:0,81,1131	0/0:18,0:18:54.17:0,54,769	1/1:0,30:30:81.26:1050,81,0	1/1:0,13:13:39.13:505,39,0	1/1:0,24:24:66.21:855,66,0	1/1:0,9:9:18.06:233,18,0	0/0:20,0:20:60.19:0,60,858	0/0:32,0:32:96.30:0,96,1349	1/1:1,17:18:39.13:505,39,0	0/0:18,0:18:54.16:0,54,751	1/1:0,28:28:69.12:869,69,0	1/1:0,8:8:18.06:233,18,0	1/1:0,28:28:63.20:816,63,0	1/1:1,23:24:69.15:859,69,0	0/0:26,0:26:78.21:0,78,1063	1/1:0,8:8:24.08:311,24,0
chr10	82136604	.	CTTGGGCT	C	1567.70	PASS	AB=0.777;AC=14;AF=0.250;AN=56;BaseQRankSum=9.038;DP=532;FS=11.586;HRun=0;HaplotypeScore=197.9470;InbreedingCoeff=-0.3365;MQ=59.44;MQ0=7;MQRankSum=-7.312;QD=10.89;ReadPosRankSum=-0.538;VQSLOD=1.5425;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,5576	0/1:3,2:5:99:117,0,325	0/0:42,0:31:84.09:0,84,2766	0/0:30,0:23:63.18:0,63,2135	0/1:11,1:12:8.77:9,0,675	0/1:4,2:6:92.73:93,0,454	0/0:30,0:30:90.31:0,90,3593	0/0:34,0:34:99:0,99,4026	0/1:5,3:8:99:140,0,560	0/1:6,2:8:99:146,0,578	0/0:5,0:5:9.50:0,10,349	0/1:6,5:11:99:166,0,556	0/0:45,0:44:99:0,132,4984	0/0:46,0:46:99:0,135,5053	0/1:10,2:12:99:143,0,858	0/1:9,3:12:99:162,0,668	0/0:11,0:11:27.09:0,27,1049	0/1:7,3:10:99:112,0,530	0/0:22,0:18:54.16:0,54,2003	0/0:22,0:22:63.22:0,63,2615	0/1:9,5:14:91.35:91,0,405	0/0:21,0:19:54.19:0,54,1998	0/1:6,1:7:5.53:6,0,470	0/1:13,5:18:73.96:74,0,333	0/1:5,3:8:70.29:70,0,530	0/1:8,4:13:99:392,0,717	0/0:31,0:30:93.32:0,93,3733	0/0:1,0:1:3.01:0,3,126
chr10	82136614	.	AGCTTTCTCAG	A	1835.32	PASS	AB=0.808;AC=14;AF=0.250;AN=56;BaseQRankSum=9.355;DP=562;FS=4.156;HRun=0;HaplotypeScore=245.7695;InbreedingCoeff=-0.3442;MQ=56.20;MQ0=10;MQRankSum=-8.300;QD=9.87;ReadPosRankSum=-1.617;VQSLOD=1.6883;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,7249	0/1:3,1:5:99:161,0,419	0/0:37,0:24:72.03:0,72,2911	0/0:34,0:24:67.11:0,67,2885	0/1:12,1:13:17.19:17,0,1009	0/1:8,2:10:99:114,0,1087	0/0:34,0:34:99:0,102,4739	0/0:32,0:32:96.33:0,96,4814	0/1:6,3:9:99:199,0,827	0/1:10,2:12:99:173,0,1245	0/0:6,0:6:9.70:0,10,430	0/1:6,5:11:99:188,0,729	0/0:41,0:40:99:0,120,5180	0/0:46,0:46:99:0,136,5580	0/1:16,2:18:90.90:91,0,2085	0/1:13,4:17:99:216,0,1413	0/0:11,0:11:33.11:0,33,1499	0/1:9,3:12:99:118,0,1114	0/0:17,0:13:39.13:0,39,2078	0/0:22,0:22:66.23:0,66,3445	0/1:18,3:24:71.95:72,0,1542	0/0:19,0:17:51.18:0,51,2241	0/1:8,1:8:11.02:11,0,867	0/1:19,4:24:78.93:79,0,753	0/1:5,3:8:99:115,0,717	0/1:10,4:14:99:435,0,1258	0/0:30,0:30:90.29:0,90,4421	0/0:1,0:1:3.01:0,3,148
chr10	82136624	.	G	GCA	5544.66	PASS	AB=0.642;AC=28;AF=0.500;AN=56;BaseQRankSum=6.572;DP=666;FS=7.192;HRun=0;HaplotypeScore=200.2298;InbreedingCoeff=0.4911;MQ=53.92;MQ0=14;MQRankSum=-6.305;QD=19.52;ReadPosRankSum=-3.717;VQSLOD=3.2230;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,120,1394	0/1:3,4:7:7.26:156,0,7	0/0:45,0:22:34.68:0,35,356	0/0:39,0:24:21.23:0,21,399	1/1:4,14:18:5.42:318,5,0	0/1:5,8:13:1.21:296,0,1	0/0:32,0:34:71.68:0,72,776	0/0:37,0:37:73.69:0,74,809	1/1:3,7:10:20.10:265,20,0	0/1:7,10:17:19.56:394,0,20	1/1:1,7:8:12.04:176,12,0	1/1:9,12:21:39.06:536,39,0	0/0:16,0:37:66.23:0,66,369	0/0:14,0:47:93.52:0,94,473	1/1:8,14:22:13.31:605,13,0	0/1:10,11:21:5.64:395,0,6	1/1:4,11:15:0.66:435,1,0	0/1:8,11:18:61.66:308,0,62	0/0:20,0:16:39.12:0,39,470	0/0:22,0:24:53.82:0,54,594	1/1:17,16:33:0.76:450,1,0	0/0:6,0:18:34.60:0,35,161	1/1:4,12:16:3.35:249,3,0	1/1:10,20:30:20.58:273,21,0	1/1:5,7:13:21.06:276,21,0	0/1:10,9:19:29.76:376,0,30	0/0:28,0:28:66.19:0,66,783	1/1:0,1:1:3.01:38,3,0
chr10	82136641	.	CAT	C	3588.03	PASS	AB=0.989;AC=26;AF=0.464;AN=56;BaseQRankSum=4.452;DP=836;FS=18.736;HRun=0;HaplotypeScore=231.1722;InbreedingCoeff=0.0443;MQ=50.72;MQ0=15;MQRankSum=-1.922;QD=6.99;ReadPosRankSum=-5.833;VQSLOD=0.6228;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,157,2440	0/1:8,0:8:21.96:29,0,22	0/0:48,0:16:18.28:0,18,500	0/0:56,0:23:25.24:0,25,574	1/1:22,0:22:8.12:121,8,0	0/1:16,0:16:21.74:56,0,22	0/0:35,0:35:50.36:0,50,1137	0/0:44,0:41:99:0,103,1596	1/1:19,0:19:5.59:145,6,0	0/1:31,0:31:34.17:334,0,34	1/1:14,0:14:16.96:157,17,0	0/1:30,1:31:2.99:248,0,3	0/1:41,0:40:99:345,0,116	0/1:50,0:50:85.96:404,0,86	0/1:30,0:30:0.27:251,0,0	0/1:25,1:26:26.63:190,0,27	0/1:20,1:21:56.05:159,0,56	0/1:28,0:27:99:121,0,123	0/0:27,0:24:67.69:0,68,883	0/0:30,0:30:74.58:0,75,1068	0/1:48,2:48:0.23:327,0,0	0/1:24,0:22:93.85:143,0,94	1/1:19,0:18:0.05:102,0,0	1/1:36,0:36:12.85:113,13,0	0/1:17,0:17:0.62:116,0,1	0/1:28,0:28:99:183,0,109	0/0:24,0:24:72.20:0,72,1254	1/1:2,0:2:5.94:43,6,0
chr10	82136672	.	TCA	T	2514.41	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.692;DP=959;FS=1.492;HRun=0;HaplotypeScore=220.8580;InbreedingCoeff=0.9937;MQ=53.62;MQ0=15;MQRankSum=0.504;QD=22.45;ReadPosRankSum=0.587;VQSLOD=3.8485;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,135,2139	0/0:12,0:12:27.08:0,27,431	0/0:69,0:28:72.21:0,72,1137	0/0:64,0:34:64.56:0,65,983	0/0:29,0:29:62.88:0,63,1022	0/0:16,0:16:29.73:0,30,502	0/0:35,0:35:57.05:0,57,935	0/0:42,0:42:75.24:0,75,1180	0/0:25,0:25:48.15:0,48,781	0/0:42,0:42:99:0,114,1868	0/0:25,0:25:60.16:0,60,1011	0/0:39,1:40:57.68:0,58,1470	1/1:7,35:41:90.27:1136,90,0	1/1:10,35:45:78.22:974,78,0	0/0:34,0:34:75.22:0,75,1253	0/0:35,0:35:81.28:0,81,1350	0/0:24,0:24:45.15:0,45,727	0/0:27,0:26:55.44:0,55,929	0/0:35,0:33:84.27:0,84,1358	0/0:28,0:28:75.24:0,75,1232	0/0:55,0:54:99:0,102,1668	1/1:4,21:25:45.09:547,45,0	0/0:26,0:25:38.83:0,39,657	0/0:45,0:45:53.35:0,53,909	0/0:19,0:19:36.02:0,36,604	0/0:39,0:39:99:0,107,1665	0/0:25,0:25:60.18:0,60,979	0/0:6,0:6:15:0,15,209
chr10	82138210	.	A	ATGTGTGTGTGTATGTG	23479.63	PASS	AB=0.836;AC=42;AF=0.750;AN=56;BaseQRankSum=0.333;DP=771;FS=0.881;HRun=0;HaplotypeScore=289.4526;InbreedingCoeff=0.4025;MQ=57.18;MQ0=15;MQRankSum=-5.415;QD=34.73;ReadPosRankSum=-0.608;VQSLOD=3.6431;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:36:83.97:0,84,1940	1/1:10,0:10:12.01:174,12,0	0/0:27,0:17:23.58:0,24,235	0/1:32,0:18:24.34:24,0,391	1/1:8,15:29:14.39:994,14,0	0/1:15,15:32:3.92:984,0,4	0/0:20,0:25:62.19:0,62,1543	1/1:42,0:33:69.07:997,69,0	1/1:10,13:29:12.04:753,12,0	1/1:12,21:36:73.09:1840,73,0	1/1:17,15:35:18.06:1276,18,0	1/1:25,0:28:35.88:1146,36,0	0/1:20,0:23:99:576,0,120	0/1:18,0:22:99:742,0,172	1/1:10,18:31:21.51:1517,22,0	1/1:19,11:36:32.05:2373,32,0	1/1:10,16:27:14.41:763,14,0	1/1:10,0:10:23.99:766,24,0	1/1:20,0:20:43.39:657,43,0	1/1:37,0:37:35.44:979,35,0	1/1:27,0:27:42.31:895,42,0	0/1:21,0:25:52.33:566,0,52	1/1:9,1:26:11.32:802,11,0	1/1:26,0:28:36.45:1198,36,0	1/1:7,11:20:18.06:1289,18,0	0/1:29,0:36:99:619,0,322	1/1:17,0:29:39.13:1548,39,0	0/0:6,0:4:5.93:0,6,41
chr10	82139303	.	A	AT	1740.79	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=4.193;DP=618;FS=7.139;HRun=6;HaplotypeScore=69.0184;InbreedingCoeff=0.9085;MQ=71.93;MQ0=0;MQRankSum=0.272;QD=22.04;ReadPosRankSum=0.843;VQSLOD=2.8014;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.13:0,81,805	0/0:11,0:11:30.07:0,30,306	0/1:15,0:16:0.29:0,0,106	./.	0/0:51,0:51:99:0,141,1413	0/0:14,0:14:42.07:0,42,418	0/0:12,0:12:33.06:0,33,330	0/0:24,0:24:66.08:0,66,648	0/0:23,0:24:68.17:0,68,673	0/0:31,0:31:78.13:0,78,770	0/0:29,0:29:84.17:0,84,843	0/0:11,0:11:30.05:0,30,299	1/1:1,15:16:36.12:453,36,0	1/1:2,19:21:51.16:640,51,0	0/0:30,0:30:78.15:0,78,783	0/0:22,0:22:66.12:0,66,661	0/0:21,0:21:60.09:0,60,595	0/0:13,0:13:33.05:0,33,328	0/0:23,0:23:60.11:0,60,597	0/0:35,0:35:93.17:0,93,928	0/0:8,0:8:24.05:0,24,245	1/1:2,24:26:66.08:789,66,0	0/0:36,0:36:96.19:0,96,966	0/0:14,0:14:42.09:0,42,428	0/0:30,0:30:87.20:0,87,887	0/0:34,0:34:78.15:0,78,786	0/0:26,0:26:78.18:0,78,796	0/0:10,0:10:30.07:0,30,306
chr10	82139636	.	GTTGTTTGTTTATTTGT	G	2516.41	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=15.179;DP=703;FS=2.848;HRun=0;HaplotypeScore=336.4169;InbreedingCoeff=-0.2744;MQ=57.07;MQ0=3;MQRankSum=-11.682;QD=5.95;ReadPosRankSum=3.529;VQSLOD=1.5589;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,31:36:21.07:929,21,0	0/1:13,0:13:99:179,0,127	0/0:13,0:11:17.01:0,17,559	0/0:22,0:19:45.75:0,46,1589	0/1:32,0:32:99:104,0,438	0/1:33,0:33:99:196,0,263	0/1:24,0:24:60.11:60,0,162	0/0:38,0:38:99:0,102,1840	0/1:24,0:24:99:114,0,188	0/1:26,0:26:99:236,0,171	0/1:28,0:28:37.96:38,0,579	0/1:34,0:34:99:155,0,557	0/0:24,0:24:57.58:0,58,997	0/0:15,0:15:36.11:0,36,627	0/1:33,0:33:99:206,0,221	0/1:30,0:30:99:133,0,304	0/1:21,0:21:68.49:68,0,179	0/1:18,0:18:25.44:25,0,147	0/0:25,0:24:57.09:0,57,1025	0/0:33,0:33:84.20:0,84,1625	0/0:22,0:22:8.32:0,8,253	0/0:28,0:28:63.13:0,63,1083	0/1:27,0:27:91.19:91,0,264	0/1:26,0:26:19.01:19,0,180	0/1:18,0:18:99:129,0,147	0/0:28,0:28:71.87:0,72,1314	0/0:22,0:22:23.37:0,23,953	0/0:10,0:9:18.06:0,18,364
chr10	82139647	.	ATTTGTTTGTTTG	A	13347.39	PASS	AB=0.618;AC=41;AF=0.732;AN=56;BaseQRankSum=5.091;DP=659;FS=3.263;HRun=0;HaplotypeScore=225.0303;InbreedingCoeff=0.5369;MQ=50.84;MQ0=3;MQRankSum=-6.775;QD=24.90;ReadPosRankSum=7.539;VQSLOD=3.0875;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:21.07:534,21,0	1/1:4,9:13:27.09:941,27,0	0/0:12,0:9:12.04:0,12,483	0/0:23,0:20:39.03:0,39,1335	1/1:12,18:30:41.89:1026,42,0	1/1:11,22:33:39.13:1304,39,0	1/1:8,13:21:15.05:494,15,0	0/0:27,0:36:30.11:0,30,382	1/1:8,15:23:24.08:798,24,0	1/1:7,18:25:44.69:1383,45,0	1/1:9,14:23:33.03:795,33,0	1/1:12,20:32:29.91:1017,30,0	0/1:11,0:25:6.31:6,0,117	1/1:2,0:16:12.46:34,12,0	1/1:9,24:33:38.93:1304,39,0	1/1:9,25:34:23.63:825,24,0	1/1:7,13:20:15.05:508,15,0	0/1:7,8:15:29.05:201,0,29	0/0:15,0:22:10.54:0,11,201	0/0:10,0:29:16.93:0,17,248	1/1:10,7:17:6.02:188,6,0	0/1:9,0:23:10.03:10,0,65	1/1:5,15:20:27.15:786,27,0	1/1:13,12:25:6.02:209,6,0	1/1:5,12:17:27.09:861,27,0	0/1:7,0:24:3.53:4,0,188	0/1:7,1:23:99:106,0,118	1/1:3,0:12:4.98:14,5,0
chr10	82139951	.	A	AATTGATTG	14869.67	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-8.424;DP=700;FS=4.287;HRun=0;HaplotypeScore=164.2838;InbreedingCoeff=0.9214;MQ=62.07;MQ0=5;MQRankSum=-7.611;QD=33.27;ReadPosRankSum=-0.134;VQSLOD=4.0883;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:44:47.33:0,47,709	1/1:7,4:11:12.04:396,12,0	0/0:21,0:16:6:0,6,52	0/0:19,0:18:14.94:0,15,152	1/1:22,23:51:63.01:1752,63,0	1/1:15,13:33:30.10:1229,30,0	0/0:8,0:26:33.11:0,33,607	0/0:24,0:24:27.07:0,27,503	1/1:8,13:26:27.09:1106,27,0	1/1:15,9:28:33.11:1244,33,0	1/1:12,9:26:18.06:599,18,0	1/1:7,15:24:45.15:1827,45,0	1/1:10,0:30:15.05:522,15,0	1/1:9,0:22:18.06:621,18,0	1/1:15,9:29:27.09:1106,27,0	1/1:14,18:34:33.11:1352,33,0	1/1:8,5:13:9.92:371,10,0	1/1:5,6:17:15.05:573,15,0	0/0:16,0:15:14.84:0,15,376	0/0:32,0:32:60.18:0,60,1358	1/1:23,0:23:17.96:324,18,0	1/1:8,0:23:17.98:471,18,0	1/1:7,8:22:21.46:657,21,0	1/1:8,5:14:6.02:226,6,0	1/1:10,9:21:12.04:492,12,0	0/0:26,0:26:51.15:0,51,1131	0/0:38,0:37:69.21:0,69,1597	0/0:7,0:7:6.02:0,6,151
chr10	82140334	.	C	CAG	27848.36	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-17.785;DP=806;FS=2.050;HRun=0;HaplotypeScore=91.4309;InbreedingCoeff=0.9987;MQ=85.58;MQ0=3;MQRankSum=-4.715;QD=48.18;ReadPosRankSum=5.597;VQSLOD=6.2301;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,37:45:99:1911,99,0	1/1:0,14:14:36.12:695,36,0	0/0:26,0:26:68.79:0,69,930	0/0:27,0:26:68.79:0,69,983	1/1:0,29:29:78.27:1504,78,0	1/1:1,24:25:63.22:1216,63,0	0/0:27,0:27:81.25:0,81,1197	0/0:39,0:39:99:0,114,1707	1/1:2,26:28:75.26:1448,75,0	1/1:0,35:36:99:1910,105,0	1/1:0,18:18:42.14:805,42,0	1/1:0,27:27:72.25:1389,72,0	1/1:0,41:41:99:2143,111,0	1/1:2,37:39:93.32:1796,93,0	1/1:0,48:48:99:2432,126,0	1/1:1,27:27:60.21:1159,60,0	1/1:0,28:27:69.24:1332,69,0	1/1:1,20:22:60.21:1159,60,0	0/0:20,0:20:60.18:0,60,893	0/0:25,0:25:69.69:0,70,1030	1/1:2,36:39:90.31:1738,90,0	1/1:1,21:23:60.21:1158,60,0	1/1:1,27:29:66.02:1274,66,0	1/1:1,32:33:81.28:1564,81,0	1/1:0,24:25:63.22:1217,63,0	0/0:25,0:25:69.23:0,69,1053	0/0:33,0:33:99:0,99,1491	0/0:6,0:6:18.06:0,18,274
chr10	82143698	.	AACAC	A	1600.74	PASS	AB=0.853;AC=38;AF=0.731;AN=52;BaseQRankSum=1.605;DP=593;FS=26.537;HRun=0;HaplotypeScore=108.4932;InbreedingCoeff=0.2162;MQ=62.30;MQ0=17;MQRankSum=0.080;QD=3.49;ReadPosRankSum=2.603;VQSLOD=0.4081;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:43:5.92:56,6,0	1/1:10,3:13:8.77:82,9,0	./.	./.	1/1:13,0:13:3.01:39,3,0	0/0:9,9:17:2.55:0,3,15	1/1:23,0:21:0.95:19,1,0	0/0:26,0:23:0.47:0,0,1	1/1:18,5:22:11.99:158,12,0	1/1:14,4:18:11.91:162,12,0	1/1:10,2:12:3.01:46,3,0	0/0:21,0:21:22.48:0,22,150	0/1:13,1:14:5.96:40,0,6	1/1:15,2:17:1.84:125,2,0	1/1:14,1:14:5.91:88,6,0	1/1:14,6:19:8.82:105,9,0	0/1:18,4:20:30.78:37,0,31	1/1:20,6:25:2.75:168,3,0	0/1:11,0:15:2.18:20,0,2	0/1:15,0:23:0:1,0,0	1/1:35,7:42:12.30:137,12,0	1/1:7,4:11:5.95:64,6,0	0/0:10,0:17:14.71:0,15,107	0/1:28,0:37:30.12:30,0,55	0/1:15,0:15:2.96:57,0,3	1/1:18,0:23:15.02:139,15,0	1/1:10,0:17:7.53:81,8,0	1/1:14,0:12:9:84,9,0
chr10	82143813	.	TA	T	1112.62	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.260;DP=714;FS=9.087;HRun=4;HaplotypeScore=81.3752;InbreedingCoeff=0.9983;MQ=80.83;MQ0=0;MQRankSum=-2.162;QD=26.49;ReadPosRankSum=0.604;VQSLOD=2.3025;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1491	0/0:11,0:11:30.10:0,30,419	0/0:14,0:14:30.10:0,30,406	0/0:28,0:28:75.05:0,75,902	0/0:32,0:32:93.30:0,93,1285	0/0:29,0:29:81.27:0,81,1132	0/0:24,0:24:63.21:0,63,875	0/0:40,0:40:99:0,105,1469	0/0:24,0:24:72.24:0,72,1007	0/0:36,0:36:99:0,102,1413	0/0:27,0:27:78.24:0,78,1053	0/0:33,0:33:99:0,99,1386	0/0:23,0:23:69.19:0,69,927	0/0:30,0:29:84.28:0,84,1176	0/0:31,0:31:87.29:0,87,1209	0/0:23,0:22:66.21:0,66,907	0/0:14,0:14:42.09:0,42,550	0/0:32,0:32:93.31:0,93,1300	0/0:29,0:29:81.27:0,81,1133	0/0:22,0:22:66.21:0,66,906	0/0:36,0:36:99:0,99,1351	0/0:13,0:13:36.12:0,36,504	0/0:18,0:18:51.16:0,51,695	0/0:16,0:16:48.16:0,48,672	0/0:23,0:23:66.21:0,66,908	1/1:2,30:32:48.19:958,48,0	0/0:28,0:27:84.24:0,84,1138	1/1:2,8:9:24.07:276,24,0
chr10	82148015	.	G	GT	217.62	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.852;DP=623;FS=2.351;HRun=8;HaplotypeScore=85.4284;InbreedingCoeff=0.9512;MQ=78.82;MQ0=0;MQRankSum=-1.656;QD=16.74;ReadPosRankSum=-2.708;VQSLOD=3.3023;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.01:0,57,514	0/0:9,0:9:27.01:0,27,247	0/0:24,0:24:45.89:0,46,457	0/0:13,0:14:17.91:0,18,226	0/0:32,0:32:96.01:0,96,865	0/0:21,0:21:54.02:0,54,494	1/1:3,10:13:27.08:312,27,0	0/0:39,0:39:89.99:0,90,810	0/0:16,0:16:45.02:0,45,408	0/0:27,0:27:69.92:0,70,631	0/0:13,0:13:39:0,39,349	0/0:21,0:21:62.99:0,63,563	0/0:27,0:27:77.97:0,78,693	0/0:23,0:24:68.03:0,68,596	0/0:35,0:35:99:0,102,922	0/0:18,0:18:48.02:0,48,439	0/0:27,2:29:11.78:0,12,607	0/0:16,0:16:36.01:0,36,329	0/0:29,0:29:65.98:0,66,596	0/0:29,0:29:81.01:0,81,734	0/0:17,0:17:51.01:0,51,461	0/0:25,0:25:75.04:0,75,686	0/0:23,0:23:66:0,66,593	0/0:18,0:18:39.01:0,39,357	0/0:28,0:29:77.07:0,77,692	0/0:23,0:24:71.06:0,71,632	0/0:25,0:24:75.03:0,75,682	0/0:6,0:6:18.01:0,18,165
chr10	82150833	.	ATGTG	A	316.83	PASS	AB=1.000;AC=7;AF=0.135;AN=52;BaseQRankSum=3.148;DP=604;FS=6.245;HRun=0;HaplotypeScore=130.8526;InbreedingCoeff=0.5082;MQ=65.38;MQ0=13;MQRankSum=0.624;QD=5.37;ReadPosRankSum=2.033;VQSLOD=2.2491;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:3.60:0,4,549	./.	./.	0/0:53,0:24:0:0,0,0	0/0:22,0:21:17.53:0,18,204	0/0:25,0:24:6.46:0,6,50	1/1:12,0:15:6.48:56,6,0	0/0:23,0:23:21.05:0,21,299	0/0:15,0:15:6.02:0,6,117	0/0:32,0:31:45.45:0,45,681	0/0:18,0:18:5.81:0,6,110	0/0:20,0:20:1.23:0,1,3	0/0:18,0:17:3.23:0,3,21	0/0:23,0:23:14.99:0,15,215	0/0:17,0:18:5.58:0,6,100	0/0:12,0:12:6.01:0,6,81	0/0:22,0:21:9.50:0,10,157	0/0:19,0:18:14.99:0,15,165	0/0:21,0:19:7.84:0,8,116	0/0:15,0:15:3.01:0,3,59	0/0:23,0:23:6.49:0,6,113	0/1:13,0:12:0:0,0,0	0/0:13,0:13:3:0,3,25	0/0:26,0:25:11.86:0,12,95	0/0:6,0:5:3.01:0,3,55	1/1:15,6:21:21.03:270,21,0	0/0:25,0:26:33.08:0,33,513	1/1:9,1:10:11.94:113,12,0
chr10	82150876	.	T	TGTGTGTGTGCGC	6329.12	PASS	AB=0.942;AC=42;AF=0.750;AN=56;BaseQRankSum=-4.672;DP=559;FS=1.036;HRun=0;HaplotypeScore=198.3058;InbreedingCoeff=0.2301;MQ=52.21;MQ0=11;MQRankSum=-3.944;QD=12.73;ReadPosRankSum=0.849;VQSLOD=3.7348;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:34.69:35,0,544	1/1:8,0:8:17.98:232,18,0	0/0:17,0:10:29.90:0,30,393	0/0:21,0:16:41.28:0,41,711	1/1:9,0:31:11.99:149,12,0	1/1:18,0:17:12.90:168,13,0	0/0:24,0:24:48.25:0,48,657	0/1:20,0:20:99:109,0,257	1/1:15,0:14:11.58:240,12,0	1/1:26,0:25:59.19:1018,59,0	1/1:13,0:13:11.71:172,12,0	0/1:7,1:30:0.07:1,0,0	1/1:21,0:20:36.90:588,37,0	1/1:24,0:23:23.54:356,24,0	1/1:16,0:16:8.52:169,9,0	1/1:13,0:13:15.05:219,15,0	1/1:3,21:30:12.04:597,12,0	1/1:6,10:21:8.89:87,9,0	0/1:14,0:10:71.55:139,0,72	0/1:12,0:12:47.54:48,0,120	1/1:20,0:20:27:346,27,0	1/1:15,0:14:14.96:202,15,0	1/1:14,0:13:7.35:94,7,0	1/1:25,0:23:17.33:217,17,0	1/1:4,0:14:3.01:76,3,0	0/1:29,0:29:99:540,0,132	0/1:20,0:20:99:355,0,155	0/1:10,0:9:96.11:170,0,96
chr10	82150880	.	CGT	C	1479.14	PASS	AB=0.963;AC=29;AF=0.518;AN=56;BaseQRankSum=-3.275;DP=528;FS=19.763;HRun=0;HaplotypeScore=129.6072;InbreedingCoeff=0.0623;MQ=59.75;MQ0=10;MQRankSum=0.474;QD=3.78;ReadPosRankSum=-2.766;VQSLOD=1.1136;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:34:49.71:50,0,77	0/0:7,0:7:2.56:0,3,8	0/0:20,0:13:38.44:0,38,454	0/0:24,0:19:53.78:0,54,766	0/1:28,0:28:13.06:15,0,13	0/0:12,0:11:3.89:0,4,45	1/1:25,0:25:8.03:53,8,0	1/1:2,16:18:45.09:576,45,0	0/1:14,0:14:15.99:16,0,51	0/1:26,0:25:41.28:41,0,195	0/0:12,0:12:2.73:0,3,40	1/1:23,0:23:2.76:19,3,0	0/1:22,0:21:0.77:1,0,2	0/0:22,0:21:7.98:0,8,98	0/1:15,0:15:9.45:9,0,18	0/1:13,0:13:12.21:21,0,12	0/0:26,0:26:6.70:0,7,26	0/1:17,0:16:2.85:26,0,3	0/1:4,9:9:12.46:219,0,12	1/1:13,1:14:15.86:257,16,0	0/1:18,0:18:18.07:18,0,31	1/1:15,0:14:1.36:3,1,0	1/1:15,0:14:5.48:34,5,0	0/1:24,0:22:14:31,0,14	0/0:14,0:13:2.22:0,2,7	1/1:30,0:30:17.98:105,18,0	1/1:17,1:18:2.24:125,2,0	1/1:8,0:7:1.84:20,2,0
chr10	82152328	.	C	CT	402.99	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.434;DP=603;FS=10.761;HRun=9;HaplotypeScore=57.9285;InbreedingCoeff=0.9266;MQ=69.87;MQ0=0;MQRankSum=-1.520;QD=23.71;ReadPosRankSum=0.987;VQSLOD=4.0526;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:45.12:498,45,0	0/0:6,0:6:15:0,15,130	0/0:7,0:7:11.03:0,11,82	0/0:9,0:9:15.02:0,15,99	0/0:40,0:40:99:0,108,925	0/0:25,0:25:68.97:0,69,595	0/0:0,0:10:18.33:0,18,54	0/0:36,1:37:62.76:0,63,767	0/0:16,0:17:50.03:0,50,423	0/0:26,0:26:68.97:0,69,597	0/0:21,0:21:47.97:0,48,417	0/0:13,0:13:38.99:0,39,338	0/0:30,0:30:74.96:0,75,651	0/0:15,0:15:32.98:0,33,286	0/0:33,0:33:89.97:0,90,781	0/0:22,0:22:59.98:0,60,521	0/0:21,0:21:56.98:0,57,494	0/0:17,0:17:37.34:0,37,358	0/0:15,0:15:38.99:0,39,339	0/0:33,0:33:80.96:0,81,700	0/0:12,0:12:29.99:0,30,260	0/0:20,0:20:59.97:0,60,517	0/0:31,0:32:86:0,86,735	0/0:11,0:11:29.98:0,30,260	0/0:31,0:31:83.98:0,84,729	0/0:26,0:26:65.97:0,66,573	0/0:33,0:33:83.97:0,84,729	0/0:23,0:23:56.98:0,57,495
chr10	82154690	.	A	AG	11078.53	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=7.071;DP=496;FS=3.855;HRun=0;HaplotypeScore=72.4741;InbreedingCoeff=0.9866;MQ=68.83;MQ0=0;MQRankSum=-1.638;QD=33.37;ReadPosRankSum=5.238;VQSLOD=4.2960;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:53.48:733,53,0	1/1:1,6:7:17.65:214,18,0	0/0:15,0:10:16.61:0,17,162	0/0:11,0:8:14.33:0,14,102	1/1:1,30:31:82.96:1103,83,0	1/1:0,25:25:69.23:939,69,0	1/1:0,13:13:33.11:441,33,0	0/0:38,0:38:99:0,111,1413	1/1:0,16:16:42.14:573,42,0	1/1:0,17:17:51.09:639,51,0	1/1:1,16:17:44.10:591,44,0	1/1:0,14:14:33.11:440,33,0	1/1:0,10:10:24.08:325,24,0	1/1:0,25:25:57.19:767,57,0	1/1:0,13:13:30.10:405,30,0	1/1:1,20:21:43.96:606,44,0	1/1:1,21:22:47.20:653,47,0	1/1:2,12:14:33.11:449,33,0	0/0:15,0:15:45.13:0,45,581	0/0:21,0:21:60.17:0,60,780	1/1:0,13:13:33.11:451,33,0	1/1:1,6:7:13.75:201,14,0	1/1:0,19:19:51.17:694,51,0	1/1:0,8:8:18.06:245,18,0	1/1:0,17:17:45.15:610,45,0	0/0:3,1:32:59.14:0,59,675	0/0:24,0:24:71.87:0,72,897	0/0:1,0:8:17.91:0,18,133
chr10	82155134	.	CA	C	338.70	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.707;DP=624;FS=0.000;HRun=8;HaplotypeScore=125.1447;InbreedingCoeff=0.9560;MQ=64.33;MQ0=0;MQRankSum=-0.662;QD=22.58;ReadPosRankSum=-0.397;VQSLOD=2.1422;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:72.18:0,72,830	0/0:10,0:10:30.09:0,30,360	0/0:21,0:12:24.11:0,24,235	0/0:13,0:9:11.77:0,12,138	0/0:24,0:24:69.21:0,69,827	0/0:20,0:20:48.15:0,48,575	1/1:0,15:15:45.07:434,45,0	0/0:32,0:32:88.49:0,88,1034	0/0:21,0:21:48.13:0,48,563	0/0:30,0:30:84.25:0,84,992	0/0:32,0:32:87.26:0,87,1035	0/0:23,0:23:51.16:0,51,612	0/0:18,0:18:45.12:0,45,528	0/0:22,0:22:54.15:0,54,635	0/0:18,0:18:42.09:0,42,478	0/0:19,0:19:48.13:0,48,563	0/0:37,0:37:81.25:0,81,972	0/0:16,0:16:33.08:0,33,384	0/0:22,0:22:63.17:0,63,739	0/0:37,0:37:99:0,102,1204	0/0:10,0:10:16.99:0,17,311	0/0:14,0:14:36.11:0,36,432	0/0:22,0:22:54.17:0,54,649	0/0:13,0:13:33.04:0,33,366	0/0:22,0:22:45.14:0,45,541	0/0:27,0:27:78.23:0,78,932	0/0:39,0:39:96.27:0,96,1145	0/0:17,0:17:45.14:0,45,543
chr10	82155167	.	T	TTAA	15425.39	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=3.164;DP=639;FS=6.395;HRun=0;HaplotypeScore=125.2793;InbreedingCoeff=-0.1290;MQ=65.17;MQ0=0;MQRankSum=-1.181;QD=25.20;ReadPosRankSum=9.283;VQSLOD=3.2492;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:10.72:656,0,11	1/1:14,0:14:11.14:386,11,0	0/0:16,0:15:32.81:0,33,401	0/0:10,0:10:26.09:0,26,339	0/1:29,0:29:1.84:697,0,2	1/1:22,0:22:11.24:620,11,0	1/1:5,7:12:36.08:637,36,0	0/1:24,0:24:99:210,0,243	0/1:25,0:25:33.68:596,0,34	0/1:30,0:30:99:433,0,153	0/1:25,0:25:30.67:595,0,31	1/1:28,0:28:16.27:695,16,0	0/1:22,0:22:14.76:542,0,15	0/1:26,0:26:99:459,0,100	1/1:21,0:21:29.20:598,29,0	0/1:20,0:20:1.79:465,0,2	1/1:34,0:34:52.26:867,52,0	0/1:9,0:9:0.93:170,0,1	0/1:22,0:22:99:302,0,164	1/1:41,0:41:8.39:1048,8,0	0/1:14,0:14:60.75:258,0,61	1/1:22,0:22:9.23:576,9,0	0/1:25,0:25:99:385,0,113	1/1:13,0:13:9.13:342,9,0	0/1:21,0:21:1.79:462,0,2	1/1:3,29:32:93.15:1806,93,0	0/1:37,0:37:8.61:839,0,9	1/1:2,14:17:36.12:779,36,0
chr10	82155172	.	A	AATC	24677.67	PASS	AB=0.739;AC=49;AF=0.875;AN=56;BaseQRankSum=-2.122;DP=676;FS=19.748;HRun=0;HaplotypeScore=102.8904;InbreedingCoeff=0.5512;MQ=65.60;MQ0=0;MQRankSum=-1.884;QD=38.32;ReadPosRankSum=6.420;VQSLOD=3.7825;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,22:27:54.19:1108,54,0	1/1:2,10:12:33.11:678,33,0	0/0:19,0:17:35.32:0,35,448	0/0:13,0:13:23.25:0,23,355	1/1:6,23:29:66.16:1251,66,0	1/1:2,19:21:54.19:1109,54,0	1/1:12,0:12:9.09:300,9,0	0/1:12,11:24:4.52:581,0,5	1/1:4,20:26:54.19:1109,54,0	1/1:10,21:31:60.15:1096,60,0	1/1:6,22:28:57.11:1126,57,0	1/1:3,28:31:63.21:1262,63,0	1/1:7,20:28:51.17:1016,51,0	1/1:8,20:28:42.14:863,42,0	1/1:1,23:24:51.18:1048,51,0	1/1:2,18:21:42.14:863,42,0	1/1:2,33:35:67.28:1472,67,0	1/1:2,9:11:15.05:308,15,0	1/1:9,14:25:34.22:836,34,0	1/1:7,33:40:99:1953,102,0	0/1:3,12:16:16.51:466,0,17	1/1:2,20:23:51.18:1039,51,0	1/1:8,18:26:36.12:740,36,0	1/1:1,12:13:30.10:616,30,0	1/1:2,18:22:42.14:863,42,0	1/1:30,1:31:65.26:1016,65,0	1/1:7,30:40:75.18:1535,75,0	0/1:20,0:20:4.78:424,0,5
chr10	82156300	.	TG	T	22965.61	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.332;DP=729;FS=4.253;HRun=3;HaplotypeScore=77.0354;InbreedingCoeff=0.9997;MQ=87.24;MQ0=1;MQRankSum=-10.550;QD=34.12;ReadPosRankSum=7.843;VQSLOD=4.3691;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:99:1226,99,0	1/1:0,11:11:30.09:372,30,0	0/0:30,0:30:84.14:0,84,1083	0/0:26,0:26:62.13:0,62,836	1/1:1,22:23:63.20:780,63,0	1/1:2,26:28:75.23:921,75,0	1/1:0,34:34:90.28:1115,90,0	1/1:0,40:40:99:1462,120,0	1/1:1,25:26:72.23:892,72,0	1/1:2,28:29:76.22:996,76,0	1/1:1,24:25:66.21:818,66,0	1/1:2,25:27:69.22:855,69,0	1/1:1,31:32:90.28:1114,90,0	1/1:0,26:26:78.25:967,78,0	1/1:0,24:24:66.21:817,66,0	1/1:0,35:35:93.29:1152,93,0	1/1:1,25:26:72.23:892,72,0	1/1:0,17:17:51.16:632,51,0	1/1:1,25:26:75.24:928,75,0	1/1:0,19:19:51.16:632,51,0	1/1:1,27:28:75.24:929,75,0	1/1:0,22:22:63.20:781,63,0	1/1:2,18:19:51.16:632,51,0	1/1:0,25:25:72.23:892,72,0	1/1:0,21:21:51.16:632,51,0	1/1:1,28:29:81.25:1004,81,0	1/1:1,24:25:69.22:855,69,0	1/1:0,19:19:54.17:669,54,0
chr10	82157254	.	G	GAA	9046.85	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-4.244;DP=548;FS=13.445;HRun=11;HaplotypeScore=77.5228;InbreedingCoeff=0.6209;MQ=66.29;MQ0=8;MQRankSum=-3.669;QD=17.46;ReadPosRankSum=3.419;VQSLOD=2.2221;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:30:11.09:100,11,0	1/1:2,1:3:2.27:42,2,0	0/1:26,0:11:2.14:2,0,83	0/0:30,0:12:7.54:0,8,44	1/1:10,8:19:44.52:519,45,0	1/1:4,6:11:29.58:372,30,0	1/1:6,2:19:20.95:212,21,0	1/1:11,0:28:22.65:356,23,0	1/1:1,7:8:15.04:199,15,0	1/1:10,9:19:42.13:590,42,0	1/1:12,7:21:53.12:533,53,0	1/1:6,9:17:17.41:193,17,0	1/1:7,4:11:22.69:288,23,0	1/1:4,4:8:18.02:236,18,0	1/1:2,11:15:23.56:298,24,0	1/1:8,4:12:23.52:288,24,0	1/1:4,27:31:62.68:858,63,0	1/1:7,11:19:43.95:583,44,0	1/1:24,0:29:59.84:458,60,0	1/1:9,1:32:52.05:499,52,0	1/1:1,11:12:18.06:261,18,0	1/1:13,7:20:41.09:516,41,0	1/1:11,7:19:36.29:488,36,0	1/1:9,6:16:27.08:371,27,0	1/1:7,11:18:23.47:256,23,0	1/1:8,0:23:38.12:152,38,0	1/1:3,0:19:18.46:172,18,0	1/1:4,1:26:38:205,38,0
chr10	82157336	.	TTTTTG	T	615.87	PASS	AB=0.852;AC=4;AF=0.071;AN=56;BaseQRankSum=-4.459;DP=513;FS=10.990;HRun=0;HaplotypeScore=148.3525;InbreedingCoeff=0.3929;MQ=62.31;MQ0=5;MQRankSum=1.163;QD=8.93;ReadPosRankSum=-1.146;VQSLOD=2.1207;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:23:33.09:0,33,522	0/0:8,0:8:16.20:0,16,377	0/0:7,0:5:3.01:0,3,78	0/0:19,0:5:0.47:0,0,1	0/0:27,0:27:45.76:0,46,919	0/0:20,0:20:42.14:0,42,888	0/0:24,0:24:50.59:0,51,355	0/0:29,0:28:18.06:0,18,449	0/0:7,0:7:9.03:0,9,190	0/0:22,0:22:51.12:0,51,940	0/0:24,0:23:51.07:0,51,868	0/0:15,0:15:24.03:0,24,404	0/0:12,0:12:18.06:0,18,366	0/0:10,0:10:12.04:0,12,254	0/0:11,0:11:21.07:0,21,427	0/0:12,0:11:9.03:0,9,190	0/0:29,0:29:63.09:0,63,1144	0/0:21,0:21:45.15:0,45,946	0/0:27,0:25:27.08:0,27,688	0/1:26,1:27:15:15,0,884	0/0:11,0:11:18.06:0,18,381	0/0:16,0:16:21.07:0,21,444	0/0:21,0:21:22.42:0,22,448	0/0:10,0:10:15.05:0,15,309	0/0:21,0:19:36.12:0,36,753	0/1:11,6:17:33.40:449,0,33	0/0:18,0:18:21.07:0,21,575	1/1:22,3:25:15.05:262,15,0
chr10	82157338	.	T	TTTG	12925.67	PASS	AB=0.981;AC=39;AF=0.696;AN=56;BaseQRankSum=-2.962;DP=517;FS=3.992;HRun=0;HaplotypeScore=90.3127;InbreedingCoeff=0.6975;MQ=62.26;MQ0=6;MQRankSum=0.983;QD=35.22;ReadPosRankSum=5.230;VQSLOD=5.5363;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:71.70:72,0,423	1/1:0,8:9:21.04:411,21,0	0/0:7,0:5:12.01:0,12,163	0/0:20,0:5:4.09:0,4,41	1/1:2,25:27:60.04:1213,60,0	1/1:2,16:18:42.14:911,42,0	0/1:25,0:25:68.98:296,0,69	0/0:27,0:26:71.93:0,72,1041	1/1:4,3:7:21.07:369,21,0	1/1:4,19:23:66.18:1253,66,0	1/1:3,21:24:66.22:1142,66,0	1/1:9,5:15:27.09:514,27,0	1/1:2,11:13:21.07:432,21,0	1/1:0,10:10:12.04:260,12,0	1/1:5,6:11:27.09:516,27,0	1/1:1,11:12:9.03:195,9,0	1/1:14,16:30:81.25:1525,81,0	1/1:1,20:23:48.16:1010,48,0	0/0:27,0:24:66.18:0,66,968	0/0:27,0:27:69.16:0,69,972	1/1:0,10:10:18.06:390,18,0	1/1:10,7:17:33.08:593,33,0	1/1:0,20:21:36.05:646,36,0	1/1:2,8:10:18.06:367,18,0	1/1:1,20:19:36.12:780,36,0	0/1:16,1:17:30.97:31,0,482	0/0:17,0:17:39.12:0,39,590	0/0:25,0:25:48.14:0,48,678
chr10	82157467	.	CT	C	2625.73	PASS	AB=0.691;AC=43;AF=0.768;AN=56;BaseQRankSum=1.389;DP=462;FS=2.754;HRun=16;HaplotypeScore=69.6428;InbreedingCoeff=-0.0870;MQ=73.62;MQ0=4;MQRankSum=-0.910;QD=5.99;ReadPosRankSum=0.887;VQSLOD=2.8116;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:22:30.20:88,30,0	0/1:2,4:6:13.13:42,0,13	0/1:36,0:16:5.80:6,0,41	0/0:24,0:13:7.79:0,8,79	0/1:6,5:14:36.84:73,0,37	1/1:7,12:20:31.35:185,31,0	1/1:8,1:18:17.12:59,17,0	0/1:9,2:12:2.76:60,0,3	0/1:6,5:11:5.53:76,0,6	1/1:3,10:13:28.63:167,29,0	1/1:5,7:16:34.58:185,35,0	0/1:6,5:12:11.34:46,0,11	1/1:2,0:12:18.49:54,18,0	1/1:2,1:14:27.38:88,27,0	1/1:7,10:19:5.04:115,5,0	1/1:0,14:16:42.32:245,42,0	1/1:16,14:34:54.71:309,55,0	1/1:5,6:11:1.35:118,1,0	0/1:10,11:23:38.37:170,0,38	0/1:5,15:22:30.46:161,0,30	1/1:0,1:2:4.98:24,5,0	1/1:4,0:13:16.21:47,16,0	1/1:4,6:11:22.43:127,22,0	0/1:4,7:13:25.61:77,0,26	0/1:8,5:14:3.06:70,0,3	1/1:13,0:27:26.17:76,26,0	0/1:6,4:11:11.64:39,0,12	1/1:0,1:15:21.28:71,21,0
chr10	82157733	.	C	CA	735.13	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.825;DP=596;FS=1.732;HRun=6;HaplotypeScore=55.8518;InbreedingCoeff=0.9950;MQ=66.64;MQ0=0;MQRankSum=-2.216;QD=28.27;ReadPosRankSum=-0.139;VQSLOD=3.9947;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:66.21:830,66,0	0/0:11,0:11:30.07:0,30,306	0/0:21,0:19:42.80:0,43,385	0/0:14,0:9:21.04:0,21,209	0/0:19,0:19:53.90:0,54,526	0/0:25,0:25:72.16:0,72,734	0/0:19,0:19:45.05:0,45,448	0/0:32,0:31:64.80:0,65,657	0/0:24,0:24:66.15:0,66,673	0/0:17,0:17:48.10:0,48,486	0/0:23,0:23:63.13:0,63,637	0/0:21,0:21:60.11:0,60,599	0/0:24,0:24:66.12:0,66,665	0/0:16,0:16:48.10:0,48,484	0/0:30,0:30:81.18:0,81,826	0/0:21,0:21:57.13:0,57,581	0/0:28,0:28:75.14:0,75,755	0/0:26,0:26:69.13:0,69,696	0/0:14,0:14:36.06:0,36,357	0/0:25,0:25:66.13:0,66,668	0/0:13,0:13:39.08:0,39,391	0/0:13,0:13:36.08:0,36,366	0/0:26,0:26:78.18:0,78,794	0/0:17,0:17:39:0,39,368	0/0:15,0:15:42.08:0,42,422	0/0:30,0:30:87.18:0,87,877	0/0:31,0:31:68.83:0,69,777	0/0:15,0:15:45.10:0,45,459
chr10	82157921	.	C	CA	3899.90	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-12.392;DP=687;FS=11.108;HRun=4;HaplotypeScore=73.0805;InbreedingCoeff=0.9994;MQ=85.45;MQ0=0;MQRankSum=-1.597;QD=36.79;ReadPosRankSum=-3.737;VQSLOD=1.5397;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,130,1482	0/0:8,0:8:24.07:0,24,272	0/0:18,0:18:42.10:0,42,465	0/0:25,0:25:65.92:0,66,725	0/0:26,0:26:78.22:0,78,884	0/0:28,0:28:78.22:0,78,885	0/0:24,0:24:63.18:0,63,713	1/1:4,25:29:75.24:1008,75,0	0/0:21,0:21:60.17:0,60,680	0/0:37,0:37:99:0,99,1122	0/0:20,0:20:57.13:0,57,627	0/0:25,0:25:69.20:0,69,783	0/0:29,0:29:84.24:0,84,952	0/0:23,0:23:69.20:0,69,783	0/0:26,0:26:75.20:0,75,841	0/0:19,0:19:54.15:0,54,613	0/0:26,0:26:69.20:0,69,783	0/0:32,0:32:87.25:0,87,985	1/1:4,28:32:81.27:1107,81,0	1/1:0,16:16:48.12:636,48,0	0/0:26,0:25:69.19:0,69,780	0/0:16,0:16:48.14:0,48,544	0/0:15,0:15:42.12:0,42,476	0/0:30,0:30:81.23:0,81,919	0/0:14,0:14:42.12:0,42,476	0/0:33,0:33:90.24:0,90,1012	1/1:0,29:29:84.28:1149,84,0	0/0:13,0:13:39.11:0,39,441
chr10	82157955	.	T	TTC	1501.61	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.633;DP=662;FS=2.366;HRun=0;HaplotypeScore=87.6489;InbreedingCoeff=0.9982;MQ=92.25;MQ0=0;MQRankSum=-3.163;QD=42.90;ReadPosRankSum=1.298;VQSLOD=5.4623;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,108,1513	0/0:9,0:9:24.08:0,24,336	0/0:29,0:28:77.70:0,78,992	0/0:27,0:27:69.09:0,69,881	0/0:22,0:22:60.20:0,60,836	0/0:30,0:30:87.29:0,87,1212	0/0:32,0:32:90.28:0,90,1236	0/0:24,0:24:63.20:0,63,865	0/0:22,0:22:63.15:0,63,839	0/0:31,0:31:84.28:0,84,1173	0/0:13,0:13:36.12:0,36,504	0/0:20,0:20:57.16:0,57,750	0/0:27,0:27:72.24:0,72,1004	0/0:26,0:26:72.23:0,72,989	0/0:24,0:24:72.23:0,72,986	0/0:25,0:25:63.21:0,63,879	0/0:29,0:29:84.25:0,84,1154	0/0:32,0:32:90.22:0,90,1212	0/0:22,0:22:63.19:0,63,850	0/0:20,0:20:57.15:0,57,742	0/0:28,0:28:81.27:0,81,1128	0/0:15,0:15:42.14:0,42,586	0/0:12,0:12:36.11:0,36,484	0/0:34,0:34:93.29:0,93,1283	0/0:14,0:14:36.12:0,36,503	1/1:2,22:24:66.21:1137,66,0	0/0:20,0:20:57.16:0,57,763	1/1:1,10:11:27.09:486,27,0
chr10	82158433	.	T	TA	1042.62	PASS	AB=0.826;AC=11;AF=0.196;AN=56;BaseQRankSum=-4.362;DP=552;FS=0.000;HRun=14;HaplotypeScore=76.7754;InbreedingCoeff=0.2974;MQ=72.40;MQ0=3;MQRankSum=0.544;QD=5.29;ReadPosRankSum=-1.857;VQSLOD=1.9165;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,7:21:0.77:246,0,1	0/0:8,0:8:20.67:0,21,134	0/1:33,0:16:3.47:3,0,27	0/0:20,0:10:5.10:0,5,20	0/0:25,1:28:30.63:0,31,302	0/0:23,1:25:28.48:0,28,294	0/0:8,0:8:20.63:0,21,130	1/1:12,19:32:27.31:337,27,0	0/1:12,1:13:0.12:0,0,117	0/0:25,0:27:38.95:0,39,227	0/0:21,0:20:38.24:0,38,244	0/0:16,1:18:11.10:0,11,189	0/1:24,2:25:28.65:29,0,192	0/0:20,0:20:50.20:0,50,326	0/0:17,0:18:36.45:0,36,219	0/0:15,0:16:25.20:0,25,151	0/0:24,0:24:51.95:0,52,304	0/0:23,0:23:49.87:0,50,316	0/1:12,8:20:5.90:179,0,6	1/1:14,10:24:4.11:224,4,0	0/0:8,0:8:23.61:0,24,150	0/1:9,1:9:8.60:9,0,78	0/0:14,1:16:5.18:0,5,148	0/0:11,0:11:23.64:0,24,154	0/0:13,1:19:10.18:0,10,156	0/0:28,1:32:35.89:0,36,332	0/1:5,13:18:11.18:158,0,11	0/0:12,0:12:16.65:0,17,144
chr10	82159619	.	CG	C	12991.79	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=10.011;DP=577;FS=0.710;HRun=4;HaplotypeScore=55.5407;InbreedingCoeff=0.9941;MQ=86.16;MQ0=0;MQRankSum=-4.709;QD=32.00;ReadPosRankSum=6.048;VQSLOD=4.7088;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.23:0,78,1054	1/1:0,8:8:24.07:287,24,0	0/0:22,0:22:54.15:0,54,723	0/0:15,0:15:41.48:0,41,502	1/1:0,27:27:72.22:861,72,0	1/1:1,29:30:75.23:899,75,0	1/1:0,22:22:51.16:611,51,0	0/0:27,0:27:72.21:0,72,960	1/1:1,5:6:12.04:144,12,0	1/1:1,24:25:72.15:822,72,0	1/1:0,14:14:39.12:466,39,0	1/1:2,23:25:69.21:825,69,0	1/1:1,27:28:78.24:935,78,0	1/1:3,17:20:57.13:667,57,0	1/1:0,32:32:90.28:1079,90,0	1/1:1,23:24:63.19:755,63,0	1/1:2,27:29:69.21:827,69,0	1/1:2,20:22:57.17:683,57,0	0/0:17,0:17:48.10:0,48,628	0/0:19,0:19:57.19:0,57,797	1/1:0,19:19:57.17:683,57,0	1/1:1,11:12:33.10:396,33,0	1/1:1,17:18:45.14:539,45,0	1/1:1,24:25:69.21:827,69,0	1/1:0,20:20:57.17:683,57,0	0/0:19,1:20:21.18:0,21,703	0/0:14,0:14:42.09:0,42,564	0/0:10,0:10:30.10:0,30,420
chr10	82159954	.	T	TG	5488.99	PASS	AB=0.781;AC=37;AF=0.661;AN=56;BaseQRankSum=-9.694;DP=554;FS=5.017;HRun=9;HaplotypeScore=80.3648;InbreedingCoeff=0.5730;MQ=63.64;MQ0=9;MQRankSum=-0.607;QD=14.26;ReadPosRankSum=1.614;VQSLOD=5.1269;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:13:3.63:51,4,0	1/1:3,7:10:18.05:199,18,0	0/0:36,0:14:14.98:0,15,126	0/0:31,0:19:23.58:0,24,189	1/1:3,8:12:14.92:158,15,0	0/1:8,12:19:19.06:252,0,19	0/0:24,0:24:47.96:0,48,412	0/0:8,0:33:35.58:0,36,109	1/1:5,17:21:38.89:431,39,0	1/1:6,8:14:21.02:213,21,0	1/1:6,6:13:15.04:164,15,0	1/1:7,21:28:39.55:430,40,0	1/1:2,2:16:8.65:68,9,0	1/1:7,1:10:20.52:151,21,0	1/1:1,17:18:39.11:430,39,0	1/1:6,20:26:57.15:631,57,0	0/1:13,10:22:10.01:348,0,10	0/1:7,18:25:2.14:420,0,2	0/0:2,0:13:22.40:0,22,65	0/0:2,0:13:18.59:0,19,57	1/1:17,37:54:36.66:791,37,0	1/1:4,0:13:14.36:82,14,0	1/1:2,5:7:12.03:133,12,0	1/1:7,11:18:21.06:232,21,0	1/1:4,11:15:4.05:273,4,0	0/1:16,0:16:15.31:15,0,23	0/0:2,0:18:30.55:0,31,89	0/1:8,0:8:17.21:17,0,20
chr10	82160178	.	G	GACACACACAC	11974.07	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-2.359;DP=711;FS=0.703;HRun=0;HaplotypeScore=198.8316;InbreedingCoeff=0.5009;MQ=61.94;MQ0=12;MQRankSum=-4.945;QD=19.50;ReadPosRankSum=-0.647;VQSLOD=3.5091;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:28:11.06:253,11,0	1/1:7,0:7:7.87:164,8,0	0/1:48,0:23:12.11:12,0,241	0/0:55,0:28:1.38:0,1,164	1/1:12,3:18:5.49:292,5,0	1/1:12,5:21:9.03:448,9,0	1/1:19,0:32:20.43:564,20,0	1/1:31,0:28:20.40:294,20,0	1/1:10,5:28:15.05:679,15,0	1/1:19,7:29:35.87:1092,36,0	1/1:17,0:17:15.03:381,15,0	1/1:14,11:34:25.02:1201,25,0	1/1:8,4:21:9.03:391,9,0	1/1:9,6:20:17.93:891,18,0	1/1:12,10:34:18.06:901,18,0	1/1:14,9:27:24.08:1024,24,0	1/1:8,4:20:6.45:419,6,0	1/1:12,5:24:9.50:435,10,0	1/1:17,0:16:15.04:271,15,0	1/1:12,0:12:8.71:98,9,0	1/1:14,5:25:5.58:285,6,0	1/1:13,4:26:3.48:146,3,0	1/1:18,0:18:3.79:163,4,0	1/1:13,5:21:3.08:146,3,0	1/1:19,10:36:24.51:1247,25,0	0/0:30,0:32:51.07:0,51,1152	1/1:15,0:15:11.97:178,12,0	0/0:10,0:10:24.08:0,24,709
chr10	82163892	.	C	CT	1134.13	PASS	AB=0.742;AC=8;AF=0.143;AN=56;BaseQRankSum=-3.083;DP=603;FS=4.067;HRun=12;HaplotypeScore=72.9545;InbreedingCoeff=0.6684;MQ=65.17;MQ0=0;MQRankSum=0.928;QD=10.31;ReadPosRankSum=-3.740;VQSLOD=2.3101;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:21:28.50:0,29,82	0/0:11,0:11:23.82:0,24,175	0/0:5,0:5:5.42:0,5,31	0/0:7,0:7:6.40:0,6,44	0/0:20,1:21:21.49:0,21,321	0/0:29,1:31:32.38:0,32,392	0/0:24,0:24:56.61:0,57,414	1/1:9,15:24:42.05:399,42,0	0/0:24,1:25:24.41:0,24,339	0/0:23,0:23:35.58:0,36,259	0/1:17,2:20:12.09:12,0,231	0/0:22,1:23:18.48:0,18,297	0/0:27,1:28:36.37:0,36,430	0/0:26,0:26:52.89:0,53,390	0/0:34,0:34:63.25:0,63,477	0/0:25,0:25:50.57:0,51,369	0/0:23,0:25:49.73:0,50,356	0/0:12,0:13:25.87:0,26,181	1/1:4,10:15:22.74:224,23,0	0/1:6,17:23:14.87:307,0,15	0/0:18,0:22:46.56:0,47,307	0/0:21,0:21:40.43:0,40,284	0/0:23,0:27:60.55:0,61,411	0/0:18,0:19:37.76:0,38,268	0/0:26,0:25:50.56:0,51,371	0/0:22,0:22:35.67:0,36,263	1/1:6,21:27:20.47:344,20,0	0/0:14,0:14:32.75:0,33,241
chr10	82166530	.	AAAG	A	6639.81	PASS	AB=0.917;AC=39;AF=0.696;AN=56;BaseQRankSum=8.487;DP=393;FS=7.145;HRun=0;HaplotypeScore=63.6859;InbreedingCoeff=0.8264;MQ=74.18;MQ0=1;MQRankSum=-2.143;QD=31.47;ReadPosRankSum=2.194;VQSLOD=4.7323;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.30:0,87,1814	1/1:0,2:2:6.02:91,6,0	0/0:15,0:11:18.05:0,18,289	0/0:20,0:12:3.18:0,3,196	1/1:2,21:23:57.08:799,57,0	1/1:3,30:33:78.26:1187,78,0	1/1:0,5:5:12.04:183,12,0	0/0:43,0:43:87.11:0,87,1722	1/1:1,7:8:9.03:137,9,0	1/1:2,9:11:27.08:385,27,0	1/1:3,8:11:30.09:420,30,0	1/1:0,6:6:12.04:183,12,0	1/1:0,4:4:12.03:162,12,0	1/1:0,4:4:9.03:137,9,0	1/1:1,6:7:18.06:274,18,0	1/1:0,8:8:18.06:274,18,0	1/1:2,17:19:42.14:639,42,0	1/1:8,16:23:30.10:457,30,0	0/0:16,0:16:45.02:0,45,886	0/0:18,0:18:51.18:0,51,1081	1/1:2,6:8:15.05:228,15,0	1/1:0,4:4:12.04:183,12,0	1/1:0,6:6:18.06:274,18,0	1/1:0,8:8:24.08:365,24,0	1/1:1,8:9:17.98:245,18,0	0/1:10,1:11:18.52:19,0,482	0/0:22,0:22:60.21:0,60,1257	0/0:18,0:18:54.17:0,54,1106
chr10	82167386	.	CA	C	1484.02	PASS	AB=0.536;AC=3;AF=0.054;AN=56;BaseQRankSum=3.087;DP=787;FS=3.603;HRun=2;HaplotypeScore=92.2229;InbreedingCoeff=0.7401;MQ=91.55;MQ0=0;MQRankSum=-2.790;QD=31.57;ReadPosRankSum=3.287;VQSLOD=3.4992;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,1958	0/0:12,0:12:36.12:0,36,540	0/0:28,0:28:78.25:0,78,1139	0/0:35,0:35:95.91:0,96,1276	0/0:35,0:35:99:0,102,1525	0/0:18,0:18:54.15:0,54,760	0/0:26,0:26:78.26:0,78,1165	0/0:36,0:36:99:0,102,1458	0/0:18,0:18:54.18:0,54,809	0/0:30,0:30:87.28:0,87,1254	0/0:17,0:17:51.15:0,51,723	0/0:21,0:21:63.17:0,63,885	0/0:34,0:34:99:0,102,1483	0/0:32,0:32:96.33:0,96,1435	0/0:33,0:33:99:0,99,1481	0/0:27,0:27:81.27:0,81,1195	0/0:34,0:34:99:0,102,1514	0/0:29,0:29:87.29:0,87,1304	0/0:20,0:20:57.17:0,57,808	0/0:30,0:30:90.30:0,90,1348	0/0:50,0:50:99:0,150,2185	0/0:27,0:27:75.24:0,75,1103	0/0:30,0:30:75.25:0,75,1122	0/0:28,0:28:81.26:0,81,1195	0/0:22,0:22:63.21:0,63,943	0/1:4,26:30:5.68:928,0,6	0/0:22,0:22:66.21:0,66,966	1/1:0,17:17:51.17:662,51,0
chr10	82168027	.	G	GT	12250.26	PASS	AB=0.587;AC=51;AF=0.911;AN=56;BaseQRankSum=-4.322;DP=613;FS=17.747;HRun=9;HaplotypeScore=121.8168;InbreedingCoeff=0.7298;MQ=76.71;MQ0=0;MQRankSum=-6.506;QD=23.16;ReadPosRankSum=4.497;VQSLOD=3.7598;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:23,5:28:72.19:794,72,0	1/1:2,7:9:20.97:206,21,0	0/0:47,0:37:44.50:0,45,412	0/0:34,0:28:15.79:0,16,161	1/1:10,12:22:45.37:473,45,0	1/1:12,12:24:45.04:473,45,0	1/1:6,6:12:27:267,27,0	1/1:13,19:31:46.06:704,46,0	1/1:1,12:14:38.94:412,39,0	1/1:4,12:16:33.04:351,33,0	1/1:7,12:19:36.09:388,36,0	1/1:6,14:20:47.16:503,47,0	1/1:12,16:28:34.07:576,34,0	1/1:5,14:19:48.11:520,48,0	1/1:13,21:35:36.43:794,36,0	1/1:8,12:20:19.07:421,19,0	1/1:10,9:18:16.03:363,16,0	1/1:8,8:16:30.02:308,30,0	1/1:9,17:26:69.11:730,69,0	1/1:5,17:22:57.02:612,57,0	1/1:5,2:7:6.01:66,6,0	1/1:7,8:16:10.07:315,10,0	1/1:5,15:20:51.10:544,51,0	1/1:5,13:18:32.99:361,33,0	1/1:11,14:25:51.12:548,51,0	0/1:8,19:27:7.26:595,0,7	1/1:10,20:30:75.15:797,75,0	1/1:1,4:5:10.97:131,11,0
chr10	82168043	.	G	GTTT	13579.33	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-7.018;DP=570;FS=2.831;HRun=9;HaplotypeScore=136.2041;InbreedingCoeff=0.8879;MQ=68.69;MQ0=0;MQRankSum=-7.557;QD=28.41;ReadPosRankSum=-0.553;VQSLOD=2.8653;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:27:73.55:0,74,450	1/1:5,3:8:15.04:250,15,0	0/0:35,0:25:2.40:0,2,260	0/0:25,0:21:26.24:0,26,249	1/1:6,15:24:48.07:819,48,0	1/1:5,12:19:36.12:693,36,0	1/1:2,6:10:24.06:423,24,0	1/1:16,0:30:44.79:341,45,0	1/1:9,6:16:30.08:516,30,0	1/1:7,10:17:34.67:631,35,0	1/1:3,13:17:35.97:584,36,0	1/1:9,10:21:36.07:603,36,0	1/1:7,14:23:39.11:715,39,0	1/1:5,18:26:48.12:851,48,0	1/1:11,17:29:56.76:1033,57,0	1/1:5,12:17:33.11:650,33,0	1/1:5,11:18:42.01:656,42,0	1/1:6,6:12:21.05:378,21,0	1/1:10,0:27:44.33:327,44,0	1/1:16,0:26:61.81:573,62,0	1/1:1,2:4:9.03:161,9,0	1/1:5,9:14:27.07:476,27,0	1/1:8,12:20:45.14:835,45,0	1/1:5,10:17:28.32:465,28,0	1/1:8,9:19:36.09:624,36,0	1/1:12,0:26:51.76:444,52,0	1/1:7,0:29:56.79:440,57,0	1/1:4,0:6:11.92:89,12,0
chr10	82168309	.	CGT	C	149.95	PASS	AB=0.982;AC=16;AF=0.296;AN=54;BaseQRankSum=4.944;DP=387;FS=3.762;HRun=0;HaplotypeScore=85.6169;InbreedingCoeff=-0.1833;MQ=77.61;MQ0=1;MQRankSum=-4.524;QD=0.70;ReadPosRankSum=5.897;VQSLOD=0.3726;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:19:7.81:8,0,130	1/1:3,0:3:2.68:11,3,0	0/0:16,0:13:26.35:0,26,293	0/1:15,0:16:1.79:2,0,186	0/1:13,0:12:19.18:19,0,54	0/1:9,0:9:17.36:17,0,36	0/1:19,0:19:35.27:35,0,119	0/0:8,0:8:19.72:0,20,132	0/1:12,1:13:22.81:23,0,92	0/0:13,0:13:7.85:0,8,169	0/1:12,2:14:12.72:13,0,60	0/0:21,1:22:15.21:0,15,141	0/0:11,0:11:14.19:0,14,115	0/0:11,0:11:14.90:0,15,135	0/1:18,0:18:28.08:31,0,28	0/1:16,0:15:27.88:28,0,99	0/1:16,0:16:9.84:52,0,10	0/0:14,0:14:19.01:0,19,180	0/0:12,0:13:13.76:0,14,149	0/0:10,0:10:21.66:0,22,126	0/1:11,0:11:4.16:4,0,32	0/0:14,0:14:14.91:0,15,144	0/1:11,0:11:0:0,0,0	0/1:17,0:17:4.19:4,0,64	0/1:18,0:17:44.27:44,0,49	0/0:19,0:19:35.59:0,36,283	0/0:19,0:19:20.85:0,21,154	./.
chr10	82168311	.	TGG	T	2408.02	PASS	AB=0.848;AC=36;AF=0.643;AN=56;BaseQRankSum=-0.965;DP=368;FS=39.754;HRun=13;HaplotypeScore=78.7129;InbreedingCoeff=0.4708;MQ=74.53;MQ0=1;MQRankSum=-3.546;QD=8.57;ReadPosRankSum=6.042;VQSLOD=-0.6215;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,3:19:13.25:140,13,0	1/1:0,1:1:3:29,3,0	0/0:22,0:16:16.53:0,17,240	0/0:15,0:13:12.76:0,13,179	1/1:7,5:12:17.70:151,18,0	0/1:9,1:10:42.21:42,0,47	1/1:15,4:19:32.23:292,32,0	1/1:6,0:10:10.96:47,11,0	0/1:12,1:13:43.75:86,0,44	1/1:11,1:12:5.95:58,6,0	1/1:9,4:14:17.62:145,18,0	0/1:15,2:20:34.41:34,0,95	0/0:10,0:10:13.74:0,14,106	0/0:10,0:10:15.48:0,15,118	1/1:8,5:14:23.61:260,24,0	1/1:8,5:14:26.47:222,26,0	1/1:8,6:16:35.08:285,35,0	0/1:12,1:15:40.70:41,0,73	1/1:7,0:12:17.56:72,18,0	1/1:6,0:10:13.54:59,14,0	1/1:5,3:9:17.75:156,18,0	0/0:11,0:12:13.17:0,13,103	0/1:6,1:7:0:0,0,0	0/1:11,2:17:19.26:72,0,19	1/1:7,6:15:26.42:225,26,0	0/0:15,0:16:3.38:0,3,11	1/1:8,0:18:32.53:177,33,0	0/0:1,0:2:5.97:0,6,44
chr10	82168340	.	C	CA	15448.36	PASS	AB=0.750;AC=55;AF=0.982;AN=56;BaseQRankSum=-2.964;DP=431;FS=0.000;HRun=1;HaplotypeScore=60.5221;InbreedingCoeff=-0.0283;MQ=60.68;MQ0=1;MQRankSum=-1.557;QD=35.84;ReadPosRankSum=0.986;VQSLOD=4.7631;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:66.09:908,66,0	1/1:0,5:5:15.02:201,15,0	1/1:7,1:5:3.44:59,3,0	0/1:6,2:7:46.91:106,0,47	1/1:2,8:10:18.02:244,18,0	1/1:1,19:20:54.18:809,54,0	1/1:4,19:23:54.18:807,54,0	1/1:3,25:28:78.21:1106,78,0	1/1:4,15:19:48.15:695,48,0	1/1:2,12:14:33.11:493,33,0	1/1:1,10:11:33.04:466,33,0	1/1:1,16:17:42.14:626,42,0	1/1:1,13:15:32.99:490,33,0	1/1:0,11:11:27.02:377,27,0	1/1:2,17:19:45.13:650,45,0	1/1:2,13:15:42.05:578,42,0	1/1:1,21:22:60.20:897,60,0	1/1:2,10:12:27.02:377,27,0	1/1:2,20:22:63.21:938,63,0	1/1:0,12:13:39.13:565,39,0	1/1:3,23:26:69.18:989,69,0	1/1:0,10:10:21.07:314,21,0	1/1:1,6:7:12.02:180,12,0	1/1:2,15:17:42.10:604,42,0	1/1:3,16:19:45.14:655,45,0	1/1:2,10:12:30.10:443,30,0	1/1:3,15:18:54.09:739,54,0	1/1:0,3:3:9.03:135,9,0
chr10	82168587	.	A	ACCACC	23338.72	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-11.428;DP=576;FS=13.440;HRun=0;HaplotypeScore=103.9689;InbreedingCoeff=0.9906;MQ=73.73;MQ0=0;MQRankSum=-3.348;QD=59.54;ReadPosRankSum=2.307;VQSLOD=5.1387;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.29:0,90,1741	1/1:1,3:4:9.03:268,9,0	0/0:21,0:21:42.14:0,42,804	0/0:21,0:21:44.14:0,44,732	1/1:10,11:22:39.13:1075,39,0	1/1:3,13:18:42.14:1212,42,0	1/1:6,12:22:35.06:1028,35,0	0/0:27,0:27:57.16:0,57,962	1/1:5,9:17:39.13:1125,39,0	1/1:3,12:17:42.14:1163,42,0	1/1:3,11:14:30.10:892,30,0	1/1:3,18:23:54.18:1557,54,0	1/1:11,8:20:33.11:940,33,0	1/1:7,14:25:60.13:1590,60,0	1/1:3,13:17:39.13:1163,39,0	1/1:3,15:18:41.99:1206,42,0	1/1:8,29:39:81.28:2405,81,0	1/1:5,14:19:36.12:1034,36,0	0/0:15,0:15:30.10:0,30,590	0/0:17,0:17:48.16:0,48,939	1/1:13,16:30:72.16:1813,72,0	1/1:9,12:25:51.18:1423,51,0	1/1:5,8:17:35.83:1015,36,0	1/1:8,15:25:42.14:1180,42,0	1/1:5,13:19:42.14:1249,42,0	0/0:16,0:16:48.15:0,48,890	0/0:23,0:23:60.21:0,60,1191	0/0:11,0:11:33.08:0,33,584
chr10	82168590	.	A	ACCCCC	17468.88	PASS	AB=0.977;AC=34;AF=0.607;AN=56;BaseQRankSum=9.816;DP=570;FS=6.126;HRun=4;HaplotypeScore=122.5607;InbreedingCoeff=0.6899;MQ=73.46;MQ0=0;MQRankSum=-4.767;QD=45.37;ReadPosRankSum=5.413;VQSLOD=1.7684;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:92.38:0,92,1747	1/1:4,0:4:9.03:194,9,0	0/0:21,0:21:45.12:0,45,838	0/0:19,0:19:50.80:0,51,840	0/1:20,1:20:4.69:786,0,5	0/1:18,0:18:1.75:886,0,2	1/1:21,0:21:3.87:800,4,0	0/0:24,0:24:63.20:0,63,1131	1/1:15,2:17:24.14:861,24,0	1/1:19,0:20:5.31:844,5,0	1/1:13,0:13:30.10:699,30,0	1/1:23,1:24:53.96:1187,54,0	0/1:19,1:20:10.83:748,0,11	1/1:24,1:25:17.99:1282,18,0	1/1:16,1:17:39.13:889,39,0	1/1:19,0:19:23.08:915,23,0	1/1:38,0:38:25.39:1806,25,0	1/1:17,0:17:2.04:726,2,0	0/0:16,0:16:36.10:0,36,634	0/0:18,0:18:48.16:0,48,927	1/1:31,0:31:27.19:1256,27,0	1/1:25,0:25:7.34:1041,7,0	0/1:17,0:17:2.94:770,0,3	1/1:21,0:21:21.16:862,21,0	1/1:17,0:17:20.16:915,20,0	0/0:19,0:19:51.16:0,51,902	0/0:23,0:23:60.20:0,60,1159	0/0:11,0:11:33.11:0,33,612
chr10	82174128	.	TA	T	11256.72	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-8.394;DP=575;FS=5.387;HRun=9;HaplotypeScore=63.2361;InbreedingCoeff=0.9960;MQ=79.50;MQ0=1;MQRankSum=-3.217;QD=22.97;ReadPosRankSum=2.688;VQSLOD=5.8947;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:15:31.72:0,32,160	1/1:2,8:10:24.01:220,24,0	0/0:17,0:16:32.76:0,33,375	0/0:14,0:13:30.97:0,31,336	1/1:2,28:30:78.03:713,78,0	1/1:1,26:27:78.04:713,78,0	1/1:2,15:17:42.02:384,42,0	1/1:5,23:28:68.76:631,69,0	1/1:2,14:16:39.01:357,39,0	1/1:4,27:31:81.04:740,81,0	1/1:2,18:21:50.05:445,50,0	1/1:2,22:24:60.02:549,60,0	1/1:2,11:13:27.01:247,27,0	1/1:3,24:27:72.03:659,72,0	1/1:2,17:19:36.02:330,36,0	1/1:2,24:26:69.04:632,69,0	1/1:0,10:10:30.02:275,30,0	1/1:0,6:6:18.01:165,18,0	1/1:3,14:17:42.02:384,42,0	1/1:6,22:28:63.03:576,63,0	1/1:1,13:14:36.02:329,36,0	1/1:5,27:32:72.03:659,72,0	1/1:2,18:20:51.03:467,51,0	1/1:1,10:11:30.01:275,30,0	1/1:2,26:28:66.04:604,66,0	0/0:5,1:31:28.55:0,29,352	1/1:3,32:35:99:904,99,0	0/0:2,0:8:23.05:0,23,148
chr10	82174355	.	G	GGGAGGGAT	16188.73	PASS	AB=0.679;AC=29;AF=0.518;AN=56;BaseQRankSum=-1.850;DP=752;FS=8.725;HRun=0;HaplotypeScore=186.3383;InbreedingCoeff=-0.3667;MQ=72.87;MQ0=1;MQRankSum=-8.278;QD=24.31;ReadPosRankSum=-1.988;VQSLOD=3.2413;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:32:99:666,0,271	0/1:8,0:10:99:182,0,127	0/0:39,0:36:77.10:0,77,890	0/0:26,0:24:23.49:0,23,518	0/1:15,0:26:99:298,0,166	0/1:13,0:27:99:668,0,217	0/1:15,0:22:80.37:80,0,241	1/1:37,0:37:89.13:1005,89,0	0/1:14,0:29:99:880,0,233	0/1:24,0:41:99:1409,0,340	0/0:5,0:13:17.76:0,18,126	0/1:10,0:34:99:166,0,213	0/1:12,0:34:99:1283,0,112	0/1:12,0:29:99:1293,0,147	0/1:15,0:40:99:1420,0,123	0/1:10,0:24:99:785,0,146	0/1:8,0:19:53.99:599,0,54	0/0:8,0:8:21.88:0,22,134	1/1:7,17:27:62.93:846,63,0	1/1:3,14:27:41.81:1133,42,0	0/1:29,0:42:99:151,0,350	0/1:12,0:19:99:386,0,126	0/1:13,0:23:99:100,0,172	0/1:6,0:30:55.68:250,0,56	0/1:19,0:35:99:1091,0,309	0/1:13,0:24:99:199,0,249	1/1:2,20:26:29.93:1239,30,0	1/1:1,0:6:10.42:60,10,0
chr10	82175324	.	TG	T	11530.13	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=1.821;DP=661;FS=3.139;HRun=6;HaplotypeScore=74.7692;InbreedingCoeff=0.9880;MQ=88.25;MQ0=0;MQRankSum=-3.818;QD=27.32;ReadPosRankSum=5.960;VQSLOD=5.0079;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,135,1738	1/1:2,13:15:36.09:387,36,0	0/0:24,0:24:57.09:0,57,670	0/0:22,0:22:47.61:0,48,570	1/1:2,28:30:87.19:922,87,0	1/1:1,14:14:39.10:419,39,0	1/1:0,15:15:39.10:419,39,0	0/0:41,0:41:99:0,114,1487	1/1:1,24:26:68.20:715,68,0	1/1:2,20:22:60.15:645,60,0	1/1:4,16:20:51.13:548,51,0	1/1:1,21:22:57.14:612,57,0	1/1:3,26:29:75.19:805,75,0	1/1:2,21:23:60.15:645,60,0	1/1:2,26:28:66.16:709,66,0	1/1:1,15:16:45.11:483,45,0	1/1:1,25:26:75.19:806,75,0	1/1:6,9:15:33.02:326,33,0	0/0:20,0:20:48.12:0,48,591	0/0:17,0:17:42.08:0,42,488	1/1:2,26:28:75.19:806,75,0	1/1:3,19:22:45.11:483,45,0	1/1:5,15:20:45.11:479,45,0	1/1:1,27:28:66.16:709,66,0	1/1:1,21:22:57.14:612,57,0	0/0:24,1:25:8:0,8,777	0/0:29,0:29:78.24:0,78,1009	0/0:10,0:10:21.07:0,21,276
chr10	82175330	.	GA	G	2419.47	PASS	AB=0.984;AC=33;AF=0.589;AN=56;BaseQRankSum=14.951;DP=641;FS=1.697;HRun=1;HaplotypeScore=101.1100;InbreedingCoeff=0.6277;MQ=84.66;MQ0=0;MQRankSum=-1.521;QD=5.84;ReadPosRankSum=7.510;VQSLOD=0.5251;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,150,2121	1/1:13,0:13:28.83:119,29,0	0/0:20,0:20:57.17:0,57,832	0/0:18,0:18:42.84:0,43,678	0/1:33,1:34:12.28:267,0,12	0/1:17,0:16:30.12:85,0,30	0/1:18,0:18:35.50:61,0,36	0/0:40,0:40:99:0,117,1756	1/1:25,0:25:38.51:186,39,0	1/1:21,0:21:7.48:70,7,0	0/1:18,1:19:3.18:134,0,3	1/1:23,0:23:0.28:107,0,0	1/1:27,0:27:36.59:191,37,0	1/1:21,0:21:46.84:171,47,0	1/1:27,0:27:26.61:134,27,0	1/1:16,0:16:11.75:98,12,0	1/1:26,0:26:39.35:192,39,0	1/1:12,0:12:18.03:67,18,0	0/0:19,0:19:51.15:0,51,715	0/0:16,0:16:39.10:0,39,544	1/1:27,0:27:37.98:200,38,0	1/1:20,0:20:14.65:114,15,0	1/1:15,1:16:36.03:173,36,0	1/1:29,0:29:9.69:131,10,0	0/1:23,0:23:1.30:125,0,1	0/0:24,1:25:36.12:0,36,920	0/0:28,0:28:84.21:0,84,1228	0/0:10,0:10:21.07:0,21,313
chr10	82176062	.	T	TA	13594.67	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.665;DP=641;FS=0.779;HRun=8;HaplotypeScore=77.5142;InbreedingCoeff=0.8277;MQ=80.29;MQ0=0;MQRankSum=-7.352;QD=22.51;ReadPosRankSum=3.784;VQSLOD=5.2835;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,2:20:48.46:266,48,0	1/1:1,5:6:12.04:138,12,0	0/0:22,0:21:19.27:0,19,300	0/0:13,0:15:6.64:0,7,157	1/1:4,37:41:99:1215,108,0	1/1:2,23:25:69.21:796,69,0	1/1:5,21:26:48.14:554,48,0	1/1:11,1:32:60.04:320,60,0	1/1:1,18:19:42.12:485,42,0	1/1:4,22:26:63.19:727,63,0	1/1:3,27:30:84.21:955,84,0	1/1:3,16:19:11.66:388,12,0	1/1:5,25:30:75.18:851,75,0	1/1:4,14:18:17.67:457,18,0	1/1:2,22:24:57.17:658,57,0	1/1:4,14:18:33.10:380,33,0	1/1:0,19:19:48.14:554,48,0	1/1:2,16:18:43.94:490,44,0	1/1:5,0:26:62.89:338,63,0	1/1:3,0:36:94.03:488,94,0	1/1:2,17:19:42.12:485,42,0	1/1:1,12:14:11.40:350,11,0	1/1:3,25:28:75.21:856,75,0	1/1:1,20:21:45.13:519,45,0	1/1:3,14:16:42.12:485,42,0	1/1:4,0:33:78.09:420,78,0	1/1:5,1:37:79.61:404,80,0	1/1:2,0:2:3.73:16,4,0
chr10	82177764	.	GAT	G	11141.98	PASS	AB=0.594;AC=51;AF=0.944;AN=54;BaseQRankSum=-0.636;DP=513;FS=0.000;HRun=0;HaplotypeScore=84.6768;InbreedingCoeff=0.3460;MQ=64.86;MQ0=3;MQRankSum=0.070;QD=22.11;ReadPosRankSum=0.033;VQSLOD=5.0152;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,22:28:57.01:683,57,0	1/1:0,7:7:18.06:223,18,0	./.	0/0:5,0:5:0.47:0,0,1	0/1:6,13:19:7.06:441,0,7	1/1:3,20:23:54.17:670,54,0	1/1:1,10:11:27.08:335,27,0	1/1:8,0:36:69.75:336,70,0	1/1:1,11:12:29.96:372,30,0	1/1:6,21:27:69.11:789,69,0	1/1:4,16:19:36.11:446,36,0	1/1:5,13:19:35.94:423,36,0	1/1:4,13:17:39.12:484,39,0	1/1:4,20:24:45.14:558,45,0	1/1:2,18:21:54:646,54,0	1/1:0,21:21:51.16:631,51,0	1/1:4,19:22:54.17:670,54,0	1/1:0,7:7:15.05:186,15,0	1/1:1,0:15:38.49:179,38,0	1/1:3,0:35:79.54:391,80,0	1/1:3,12:15:33.10:409,33,0	1/1:2,11:13:21.07:260,21,0	1/1:3,20:23:50.99:632,51,0	1/1:4,6:10:18.06:223,18,0	1/1:1,17:18:48.15:595,48,0	1/1:5,0:19:36.89:181,37,0	1/1:7,0:32:59.66:294,60,0	1/1:1,0:8:17.04:84,17,0
chr10	82178328	.	GTGTGTGTGTGTA	G	2561.94	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=-10.579;DP=536;FS=27.087;HRun=0;HaplotypeScore=174.9894;InbreedingCoeff=-0.5976;MQ=61.51;MQ0=20;MQRankSum=1.870;QD=5.23;ReadPosRankSum=-1.855;VQSLOD=1.1108;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:18:16.87:17,0,742	0/1:7,0:7:11.93:12,0,339	0/0:30,0:19:16.32:0,16,267	0/1:34,0:20:4.11:4,0,104	0/1:18,0:18:76.84:77,0,125	0/1:24,0:24:91.71:92,0,529	0/1:20,0:20:57.83:58,0,608	0/1:21,0:19:28.80:252,0,29	0/0:16,0:16:16.72:0,17,630	0/1:24,0:24:99:189,0,1135	0/1:19,0:19:89.97:90,0,406	0/1:30,0:29:99:190,0,772	0/1:15,0:14:39.96:40,0,385	0/1:17,0:17:99:112,0,507	0/1:14,0:14:99:114,0,231	0/1:19,0:19:19.60:20,0,31	0/1:21,0:21:99:158,0,356	0/1:14,0:14:78.77:79,0,656	0/1:14,0:13:99:112,0,124	1/1:21,0:21:27.44:225,27,0	0/1:25,0:20:32.64:33,0,420	1/1:20,0:20:2.95:45,3,0	0/1:20,0:20:27.23:27,0,468	0/1:16,0:16:67.97:68,0,309	0/1:24,0:23:48.55:49,0,532	1/1:14,1:15:37.03:526,37,0	0/1:13,0:13:28.08:28,0,411	1/1:2,3:4:3.01:108,3,0
chr10	82178338	.	GTA	G	4477.23	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=-4.778;DP=496;FS=1.536;HRun=0;HaplotypeScore=94.2373;InbreedingCoeff=0.1228;MQ=49.99;MQ0=22;MQRankSum=1.175;QD=9.57;ReadPosRankSum=-0.158;VQSLOD=4.6158;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:18:24.19:71,0,24	0/1:5,0:5:8.95:22,0,9	0/0:28,0:17:16.34:0,16,268	0/1:25,0:11:10.95:11,0,72	1/1:15,0:15:17.92:137,18,0	1/1:23,0:23:23.81:193,24,0	1/1:18,0:18:24.11:192,24,0	1/1:15,5:18:43.83:359,44,0	0/1:16,0:16:13.99:50,0,14	1/1:21,0:21:28.23:359,28,0	1/1:18,0:18:28.19:221,28,0	1/1:27,0:26:33.56:300,34,0	1/1:12,0:11:13.78:146,14,0	1/1:17,0:17:23.11:191,23,0	1/1:14,0:14:18.78:140,19,0	1/1:16,0:16:9.40:68,9,0	1/1:19,0:19:30.89:223,31,0	0/1:16,0:16:15.78:159,0,16	1/1:13,0:12:29.13:231,29,0	1/1:19,0:19:29.91:249,30,0	0/1:25,0:19:2.25:97,0,2	1/1:17,0:17:8.99:74,9,0	1/1:20,0:20:13.33:100,13,0	1/1:14,0:14:14.57:114,15,0	1/1:22,0:21:7.93:113,8,0	1/1:18,1:19:56.23:404,56,0	1/1:8,3:11:20.50:233,21,0	1/1:4,0:3:2.96:19,3,0
chr10	82178380	.	GAGAC	G	1151.41	PASS	AB=0.977;AC=30;AF=0.600;AN=50;BaseQRankSum=3.965;DP=459;FS=6.496;HRun=0;HaplotypeScore=116.3319;InbreedingCoeff=-0.2870;MQ=33.94;MQ0=60;MQRankSum=2.867;QD=3.30;ReadPosRankSum=1.215;VQSLOD=1.4840;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:19:9.76:10,0,24	1/1:6,0:6:2.72:19,3,0	./.	./.	./.	1/1:18,0:18:5.51:34,6,0	0/1:21,0:20:5.81:6,0,19	0/0:17,0:15:41.34:0,41,283	0/1:14,0:14:12.30:88,0,12	0/1:13,0:13:57.03:57,0,135	1/1:13,0:12:6:60,6,0	1/1:16,0:16:0.05:47,0,0	0/0:17,0:16:12.57:0,13,478	0/1:20,0:19:23.99:24,0,254	0/1:14,0:14:0:0,0,0	0/1:14,1:15:4.89:122,0,5	0/1:10,0:9:2.74:87,0,3	0/1:16,0:14:33.50:33,0,94	0/1:7,0:7:36.24:36,0,58	1/1:17,0:17:2.76:34,3,0	1/1:18,0:15:11.85:147,12,0	0/1:11,4:15:48.85:49,0,70	1/1:18,0:17:6:59,6,0	0/1:14,0:13:3.98:17,0,4	0/1:22,0:22:18.73:75,0,19	0/1:18,2:17:99:100,0,140	0/1:13,0:13:55.02:78,0,55	0/1:7,0:7:3:109,0,3
chr10	82178384	.	CAGAG	C	1335.70	PASS	AB=0.884;AC=36;AF=0.750;AN=48;BaseQRankSum=2.002;DP=462;FS=0.000;HRun=0;HaplotypeScore=115.6421;InbreedingCoeff=0.2339;MQ=33.78;MQ0=61;MQRankSum=0.207;QD=4.47;ReadPosRankSum=1.373;VQSLOD=2.2897;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:6:0:0,0,0	./.	./.	./.	0/1:12,0:16:10.88:22,0,11	1/1:14,0:21:2.81:28,3,0	0/0:20,0:17:0.47:0,0,1	1/1:14,1:15:11.83:144,12,0	1/1:9,3:13:9.02:120,9,0	1/1:13,1:14:6.02:93,6,0	1/1:10,2:12:2.90:46,3,0	0/0:19,0:18:18.18:0,18,366	0/0:18,0:19:19.61:0,20,264	0/1:9,4:14:0:0,0,0	1/1:11,3:16:8.90:128,9,0	1/1:9,3:11:11.45:160,11,0	1/1:11,5:14:3.01:46,3,0	1/1:7,0:7:3:28,3,0	1/1:15,0:17:2.39:26,2,0	0/1:18,0:15:10.08:71,0,10	0/1:14,0:14:36.08:36,0,50	1/1:14,3:16:3.01:46,3,0	1/1:10,4:13:3.01:46,3,0	1/1:14,5:21:6.46:135,6,0	1/1:19,0:17:8.32:113,8,0	1/1:11,0:13:8.61:86,9,0	1/1:7,0:7:6.02:90,6,0
chr10	82178456	.	T	TAGAC	6105.03	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=1.842;DP=541;FS=13.331;HRun=0;HaplotypeScore=131.8127;InbreedingCoeff=0.9907;MQ=71.38;MQ0=3;MQRankSum=-8.536;QD=58.70;ReadPosRankSum=-1.968;VQSLOD=5.6719;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.13:0,69,1214	0/0:6,0:6:18.05:0,18,309	0/0:31,0:29:61.35:0,61,1238	0/0:37,0:33:28.90:0,29,872	0/0:15,0:15:36.11:0,36,644	0/0:16,0:16:36.12:0,36,656	0/0:21,0:21:42.14:0,42,797	1/1:4,21:27:78.20:1739,78,0	0/0:16,0:16:45.06:0,45,780	0/0:18,0:18:48.16:0,48,911	0/0:20,0:20:57.18:0,57,1044	0/0:26,0:25:75.24:0,75,1377	0/0:18,0:18:44.59:0,45,719	0/0:21,0:21:57.18:0,57,1046	0/0:20,0:20:39.04:0,39,684	0/0:18,0:18:45.15:0,45,840	0/0:19,0:19:51.14:0,51,909	0/0:14,0:14:27.09:0,27,512	1/1:2,11:13:33.10:780,33,0	1/1:6,7:13:21.07:507,21,0	0/0:16,0:16:48.16:0,48,910	0/0:13,0:13:36.12:0,36,675	0/0:15,0:15:36.10:0,36,610	0/0:21,0:21:51.09:0,51,886	0/0:27,0:27:66.58:0,67,1225	1/1:4,14:20:54.10:1235,54,0	1/1:4,18:25:60.14:1521,60,0	1/1:0,5:5:12.04:323,12,0
chr10	82180868	.	T	TG	23781	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.895;DP=706;FS=5.135;HRun=3;HaplotypeScore=59.8936;InbreedingCoeff=0.9983;MQ=87.60;MQ0=0;MQRankSum=-10.171;QD=36.14;ReadPosRankSum=5.358;VQSLOD=5.1773;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,51:54:99:1932,138,0	1/1:1,9:10:27.07:360,27,0	0/0:21,0:21:50.95:0,51,554	0/0:27,0:27:50.07:0,50,638	1/1:2,22:24:60.10:795,60,0	1/1:0,25:25:66.22:924,66,0	1/1:0,14:14:42.14:588,42,0	1/1:4,19:23:54.17:737,54,0	1/1:1,23:24:66.22:924,66,0	1/1:2,27:29:84.27:1153,84,0	1/1:0,25:25:72.24:1007,72,0	1/1:1,29:30:81.25:1116,81,0	1/1:1,27:28:78.26:1092,78,0	1/1:1,31:32:90.30:1260,90,0	1/1:1,28:29:63.21:882,63,0	1/1:0,21:21:54.18:755,54,0	1/1:0,15:15:42.10:566,42,0	1/1:2,13:15:35.95:476,36,0	1/1:0,19:19:57.15:759,57,0	1/1:1,28:29:78.13:1025,78,0	1/1:1,29:30:69.23:965,69,0	1/1:2,21:23:60.13:815,60,0	1/1:0,23:23:63.08:882,63,0	1/1:1,16:17:39.13:546,39,0	1/1:4,30:34:81.27:1134,81,0	1/1:3,36:39:99:1449,105,0	1/1:1,36:37:93.31:1302,93,0	1/1:0,9:9:24.08:336,24,0
chr10	82181266	.	A	AC	3397.34	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-11.255;DP=729;FS=0.000;HRun=4;HaplotypeScore=70.5670;InbreedingCoeff=0.9977;MQ=74.13;MQ0=0;MQRankSum=-1.568;QD=33.97;ReadPosRankSum=-2.713;VQSLOD=3.0418;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1192	0/0:18,0:18:53.99:0,54,592	0/0:41,0:41:74.92:0,75,1057	0/0:25,0:25:54.05:0,54,563	0/0:23,0:23:60.17:0,60,680	0/0:21,0:21:48.13:0,48,543	0/0:19,0:19:54.15:0,54,612	1/1:4,26:30:75.25:1026,75,0	0/0:31,0:31:93.25:0,93,1043	0/0:25,0:25:75.19:0,75,833	0/0:18,0:18:51.13:0,51,570	0/0:27,0:27:75.21:0,75,850	0/0:32,0:32:90.26:0,90,1021	0/0:27,0:27:81.23:0,81,918	0/0:36,0:36:96.21:0,96,1049	0/0:22,0:22:63.18:0,63,714	0/0:26,0:26:72.20:0,72,816	0/0:18,0:18:48.12:0,48,534	1/1:5,20:25:69.22:923,69,0	1/1:2,23:25:63.17:840,63,0	0/0:34,0:34:99:0,102,1157	0/0:28,0:28:75.20:0,75,840	0/0:16,0:16:45.12:0,45,503	0/0:33,0:33:93.22:0,93,1040	0/0:25,0:25:66.19:0,66,748	0/0:39,0:39:99:0,111,1249	1/1:2,18:20:45.01:608,45,0	0/0:8,0:8:18.05:0,18,204
chr10	82182035	.	TACAC	T	9509.35	PASS	AB=0.644;AC=38;AF=0.679;AN=56;BaseQRankSum=3.309;DP=722;FS=4.753;HRun=0;HaplotypeScore=118.9464;InbreedingCoeff=0.7395;MQ=67.89;MQ0=17;MQRankSum=2.477;QD=18.98;ReadPosRankSum=2.984;VQSLOD=4.3404;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,1:41:19.37:19,0,141	1/1:4,8:12:21.07:334,21,0	0/0:36,0:18:3.01:0,3,72	0/0:53,0:24:7.44:0,7,89	1/1:6,14:21:29.75:336,30,0	1/1:8,16:23:24.08:385,24,0	1/1:11,17:28:3.25:359,3,0	0/0:21,0:20:25.75:0,26,311	1/1:6,11:17:10.45:412,10,0	1/1:8,18:27:63.02:853,63,0	1/1:6,13:18:29.94:407,30,0	1/1:9,18:28:45.14:682,45,0	1/1:8,14:24:39.13:605,39,0	1/1:6,11:17:24.01:372,24,0	1/1:9,22:32:47.74:749,48,0	1/1:7,15:22:15.50:464,15,0	1/1:8,15:25:30.10:451,30,0	1/1:15,3:18:20.03:378,20,0	0/0:21,0:20:31.28:0,31,608	0/0:24,0:25:56.42:0,56,1234	1/1:19,26:42:33.45:664,33,0	1/1:3,8:12:26.30:388,26,0	0/1:6,10:15:6.82:324,0,7	1/1:12,23:36:42.14:674,42,0	1/1:12,23:34:23.79:651,24,0	0/0:31,0:31:2.86:0,3,894	0/0:19,0:19:36.12:0,36,823	0/0:14,0:14:17.94:0,18,311
chr10	82182130	.	C	CAA	3852.49	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-4.469;DP=683;FS=21.626;HRun=8;HaplotypeScore=86.7776;InbreedingCoeff=0.9763;MQ=70.02;MQ0=1;MQRankSum=-1.190;QD=28.12;ReadPosRankSum=-1.840;VQSLOD=1.6228;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:51:99:0,141,1571	0/0:8,0:8:24.06:0,24,268	0/0:9,0:12:5.96:0,6,103	0/0:14,0:14:17.64:0,18,195	0/0:25,0:25:60.13:0,60,659	0/0:18,0:18:54.15:0,54,602	0/0:33,0:33:87.19:0,87,959	1/1:4,19:24:59.94:917,60,0	0/0:17,0:17:51.14:0,51,567	0/0:17,0:17:48.13:0,48,535	0/0:19,0:19:45.09:0,45,501	0/0:33,0:33:84.18:0,84,925	0/0:34,0:34:84.16:0,84,918	0/0:27,0:27:75.19:0,75,836	0/0:29,0:29:78.17:0,78,853	0/0:26,0:26:69.19:0,69,769	0/0:30,0:30:75.12:0,75,814	0/0:10,0:10:27.06:0,27,301	1/1:3,15:20:50.65:747,51,0	1/1:3,20:23:60.11:896,60,0	0/0:36,0:35:90.68:0,91,992	0/0:29,0:29:84.23:0,84,937	0/0:21,0:21:60.15:0,60,669	0/0:32,0:31:87.24:0,87,970	0/0:24,0:23:66.18:0,66,736	1/1:5,0:31:65.37:237,65,0	1/1:4,21:27:62.70:961,63,0	1/1:0,0:12:27.45:94,27,0
chr10	82183039	.	TGA	T	4478.10	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.416;DP=659;FS=1.685;HRun=0;HaplotypeScore=82.3932;InbreedingCoeff=0.9991;MQ=85.89;MQ0=0;MQRankSum=-2.187;QD=35.54;ReadPosRankSum=-1.657;VQSLOD=6.5579;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,105,1803	0/0:12,0:12:35.99:0,36,539	0/0:25,0:24:60.14:0,60,923	0/0:35,0:34:71.40:0,71,1195	0/0:34,0:34:93.30:0,93,1602	0/0:25,0:25:75.24:0,75,1273	0/0:22,0:22:54.17:0,54,911	1/1:3,27:30:78.20:991,78,0	0/0:25,0:25:69.20:0,69,1127	0/0:24,0:24:66.22:0,66,1133	0/0:19,0:19:57.15:0,57,906	0/0:19,0:19:54.17:0,54,903	0/0:21,0:21:60.19:0,60,1017	0/0:23,0:23:63.20:0,63,1076	0/0:21,0:21:63.20:0,63,1076	0/0:24,0:24:72.25:0,72,1260	0/0:19,0:19:57.18:0,57,947	0/0:27,0:27:75.24:0,75,1278	1/1:2,17:19:51.15:673,51,0	1/1:1,19:20:57.05:707,57,0	0/0:27,0:27:69.24:0,69,1195	0/0:22,0:22:60.21:0,60,1040	0/0:21,0:21:57.20:0,57,998	0/0:16,0:16:48.16:0,48,841	0/0:32,0:32:84.27:0,84,1445	1/1:1,24:25:75.25:1012,75,0	1/1:1,22:23:60.20:811,60,0	1/1:1,8:9:21.07:283,21,0
chr10	82183487	.	CTTTTTTT	C	5292.32	PASS	AB=0.590;AC=36;AF=0.643;AN=56;BaseQRankSum=-7.119;DP=411;FS=4.830;HRun=14;HaplotypeScore=131.6190;InbreedingCoeff=0.5307;MQ=57.66;MQ0=9;MQRankSum=0.392;QD=23.42;ReadPosRankSum=8.318;VQSLOD=1.4055;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:4,7:11:5.87:105,6,0	1/1:3,6:9:12:258,12,0	0/0:40,0:11:18.06:0,18,449	0/0:46,0:15:26.23:0,26,542	0/0:2,14:16:4.42:0,4,13	1/1:4,3:7:3.13:125,3,0	1/1:0,7:7:4.49:187,4,0	1/1:9,8:16:17.91:383,18,0	0/1:4,8:13:8.87:116,0,9	1/1:3,10:14:30.06:618,30,0	0/0:2,9:11:2.04:0,2,7	1/1:5,7:14:4.93:132,5,0	1/1:7,5:12:17.93:320,18,0	1/1:1,13:14:7.45:252,7,0	0/0:5,13:19:4.93:0,5,14	1/1:4,9:14:9.04:250,9,0	1/1:2,2:4:8.94:106,9,0	1/1:1,4:5:12.03:258,12,0	1/1:5,6:11:17.98:361,18,0	1/1:4,13:17:4.28:126,4,0	0/0:1,2:3:1.55:0,2,4	0/0:2,11:13:2.04:0,2,7	0/0:5,13:19:3.27:0,3,9	0/1:3,5:7:15.98:27,0,16	0/0:3,14:18:6.11:0,6,20	1/1:1,8:9:24.06:517,24,0	1/1:4,24:29:40.78:963,41,0	1/1:5,4:8:8.96:186,9,0
chr10	82183548	.	G	GTT	5687.63	PASS	AB=0.917;AC=30;AF=0.536;AN=56;BaseQRankSum=2.486;DP=526;FS=5.827;HRun=0;HaplotypeScore=250.5271;InbreedingCoeff=0.2670;MQ=53.40;MQ0=8;MQRankSum=-2.399;QD=16.11;ReadPosRankSum=-3.955;VQSLOD=3.5193;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:10.58:130,0,11	1/1:9,2:11:23.88:269,24,0	0/0:22,0:16:45.10:0,45,641	0/0:26,0:16:38.86:0,39,544	1/1:24,5:29:46.65:478,47,0	0/1:10,3:12:4.07:255,0,4	1/1:11,1:12:20.99:236,21,0	0/0:28,0:28:63.90:0,64,632	0/1:13,0:14:19.58:277,0,20	0/1:23,3:25:30.64:673,0,31	0/1:13,1:13:12.77:117,0,13	0/1:14,2:18:0.52:306,0,1	1/1:18,3:21:7.92:443,8,0	0/1:25,0:24:56.50:185,0,56	1/1:17,1:18:18.02:216,18,0	0/1:18,1:21:33.80:326,0,34	0/1:8,1:9:39.78:125,0,40	1/1:8,1:10:4.20:268,4,0	0/0:21,0:21:50.42:0,50,494	0/0:20,0:20:4.82:0,5,35	1/1:7,0:6:8.17:59,8,0	1/1:27,3:30:51.33:536,51,0	1/1:18,2:21:27.49:286,27,0	0/0:10,0:11:4.42:0,4,56	1/1:19,3:24:44.96:487,45,0	0/0:17,0:18:48.08:0,48,520	0/0:27,0:27:51.02:0,51,411	0/1:3,0:3:15.66:16,0,20
chr10	82183550	.	GTT	G	1726.29	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=-6.312;DP=443;FS=0.000;HRun=2;HaplotypeScore=212.4125;InbreedingCoeff=0.7588;MQ=60.54;MQ0=8;MQRankSum=-3.468;QD=15.28;ReadPosRankSum=4.878;VQSLOD=0.9709;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:35.26:0,35,538	0/0:9,0:9:27.09:0,27,358	0/0:23,0:17:49.95:0,50,842	0/0:28,0:18:41.89:0,42,780	0/0:26,0:26:56.89:0,57,659	0/0:14,0:13:32.09:0,32,364	0/0:10,0:10:21.05:0,21,261	1/1:9,14:23:48.63:660,49,0	0/0:12,0:12:32.21:0,32,367	0/0:22,0:21:60.19:0,60,817	0/0:12,0:11:20.98:0,21,226	0/0:16,0:16:42.03:0,42,451	0/0:19,0:19:57.10:0,57,684	0/0:16,0:15:30.35:0,30,329	0/0:13,0:13:27.01:0,27,306	0/1:16,0:16:17.11:17,0,377	0/0:7,0:7:14.77:0,15,172	0/0:9,0:9:24.08:0,24,346	1/1:11,6:17:30.40:399,30,0	1/1:3,9:12:5.51:54,6,0	0/0:7,0:6:17.91:0,18,171	0/0:23,0:23:55.85:0,56,683	0/0:18,0:18:41.56:0,42,477	0/1:10,0:10:19.56:20,0,79	0/0:19,0:19:53.30:0,53,540	1/1:8,9:17:20.15:495,20,0	1/1:6,8:14:23.64:225,24,0	1/1:4,0:3:5.87:40,6,0
chr10	82185330	.	A	AACACACACACACACACAC	14719.51	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=0.811;DP=710;FS=11.880;HRun=0;HaplotypeScore=301.0056;InbreedingCoeff=0.3291;MQ=50.61;MQ0=23;MQRankSum=-0.107;QD=22.00;ReadPosRankSum=1.384;VQSLOD=1.5329;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:34:14.96:396,15,0	1/1:13,0:13:15.03:816,15,0	0/0:41,0:17:5.16:0,5,101	0/1:40,0:19:6.55:7,0,298	1/1:17,0:15:12.04:323,12,0	1/1:24,0:23:15.49:379,15,0	1/1:31,0:29:11.61:136,12,0	1/1:52,0:43:63.06:1251,63,0	1/1:27,0:25:33.08:1120,33,0	1/1:27,0:26:38.92:556,39,0	1/1:12,0:12:2.98:21,3,0	1/1:30,0:28:33.24:1368,33,0	1/1:11,8:25:12.07:633,12,0	1/1:12,0:20:3.48:196,3,0	1/1:33,0:33:24.08:754,24,0	1/1:26,0:24:21.04:849,21,0	1/1:29,0:27:11.92:386,12,0	1/1:15,0:15:26.68:772,27,0	1/1:27,0:25:37.99:597,38,0	1/1:26,0:25:14.72:491,15,0	1/1:22,0:22:17:186,17,0	1/1:9,6:19:6.02:507,6,0	1/1:14,0:12:6:97,6,0	1/1:19,0:17:12.04:317,12,0	1/1:9,1:25:3.01:235,3,0	1/1:22,0:20:21.05:571,21,0	1/1:31,0:31:38.93:1220,39,0	1/1:6,0:6:9.03:536,9,0
chr10	82185617	.	AG	A	3175.59	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.512;DP=778;FS=0.858;HRun=2;HaplotypeScore=76.3942;InbreedingCoeff=0.9998;MQ=61.64;MQ0=2;MQRankSum=0.625;QD=35.68;ReadPosRankSum=-1.934;VQSLOD=3.3346;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,1911	0/0:11,0:11:30.09:0,30,419	0/0:36,0:30:64.17:0,64,1194	0/0:37,0:36:99:0,99,1411	0/0:22,0:22:59.78:0,60,877	0/0:30,0:30:87.22:0,87,1256	0/0:27,0:27:78.26:0,78,1151	1/1:1,26:27:78.23:997,78,0	0/0:30,0:30:87.29:0,87,1303	0/0:29,0:29:87.29:0,87,1304	0/0:13,0:13:39.13:0,39,578	0/0:28,0:28:81.26:0,81,1179	0/0:37,0:37:99:0,111,1661	0/0:26,0:26:78.26:0,78,1167	0/0:35,0:35:99:0,105,1514	0/0:39,0:39:99:0,111,1605	0/0:33,0:33:99:0,99,1459	0/0:20,0:20:60.18:0,60,865	1/1:0,19:19:57.17:725,57,0	1/1:0,14:14:42.08:525,42,0	0/0:56,0:56:99:0,169,2453	0/0:22,0:22:63.20:0,63,923	0/0:21,0:21:60.20:0,60,881	0/0:29,0:29:87.19:0,87,1275	0/0:20,0:20:54.17:0,54,789	0/0:27,0:27:75.23:0,75,1071	1/1:0,29:29:84.27:1089,84,0	0/0:17,0:17:51.16:0,51,741
chr10	82186282	.	TA	T	6637.08	PASS	AB=0.732;AC=51;AF=0.911;AN=56;BaseQRankSum=-1.716;DP=526;FS=0.000;HRun=12;HaplotypeScore=72.0359;InbreedingCoeff=0.3144;MQ=66.87;MQ0=1;MQRankSum=-2.720;QD=12.84;ReadPosRankSum=2.583;VQSLOD=5.0364;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,36:41:77.11:782,77,0	1/1:3,3:6:8.96:70,9,0	0/1:9,0:8:7.31:7,0,79	0/0:9,0:8:3.52:0,4,30	1/1:4,16:20:47.17:356,47,0	1/1:0,15:16:37.90:285,38,0	1/1:4,0:13:16.59:50,17,0	1/1:8,0:28:30.54:90,31,0	1/1:4,11:15:32.82:255,33,0	1/1:4,10:14:32.84:254,33,0	0/1:3,10:13:0.56:179,0,1	1/1:5,8:14:22.95:168,23,0	1/1:4,21:25:59.59:464,60,0	0/1:9,6:15:12.54:98,0,13	1/1:6,8:14:20.89:163,21,0	1/1:2,25:27:68.73:534,69,0	1/1:4,35:39:92.63:720,93,0	1/1:5,15:20:38.83:302,39,0	1/1:8,0:25:31.85:93,32,0	1/1:1,0:20:20.34:60,20,0	1/1:0,16:16:35.36:277,35,0	1/1:0,14:14:32.86:254,33,0	1/1:2,11:13:29.86:232,30,0	1/1:3,13:16:35.85:279,36,0	1/1:3,18:21:50.80:395,51,0	1/1:5,1:32:55.94:178,56,0	1/1:4,0:19:22.18:65,22,0	1/1:4,0:9:10.17:30,10,0
chr10	82186512	.	A	AT	3435.22	PASS	AB=0.764;AC=12;AF=0.214;AN=56;BaseQRankSum=5.586;DP=402;FS=0.000;HRun=7;HaplotypeScore=50.0001;InbreedingCoeff=0.8470;MQ=79.26;MQ0=0;MQRankSum=-0.627;QD=26.02;ReadPosRankSum=-2.519;VQSLOD=2.9118;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.01:0,57,528	0/0:6,0:6:18.03:0,18,174	0/1:13,0:11:0.08:0,0,73	0/0:17,0:14:5.64:0,6,27	0/0:17,0:17:48.06:0,48,455	0/0:20,0:20:51.06:0,51,483	0/0:6,0:6:18:0,18,163	1/1:8,16:24:51.05:564,51,0	0/0:7,0:7:21.02:0,21,197	0/0:11,0:11:30.04:0,30,286	0/0:17,0:17:48.06:0,48,456	0/0:12,0:12:27.02:0,27,255	0/0:18,0:18:48.05:0,48,453	0/0:13,0:13:36.06:0,36,348	0/0:11,0:11:30.01:0,30,279	0/0:3,0:3:9.01:0,9,87	0/0:19,0:19:41.18:0,41,467	0/0:22,0:22:57.09:0,57,550	1/1:4,19:23:57.12:644,57,0	1/1:1,20:21:60.08:690,60,0	0/0:7,0:7:18.02:0,18,170	0/0:10,0:10:29.87:0,30,269	0/0:7,0:7:21.03:0,21,203	0/0:6,0:6:15.02:0,15,145	0/0:19,0:19:54.07:0,54,514	0/1:2,17:19:0.82:532,0,1	1/1:2,18:19:48.14:571,48,0	1/1:0,12:12:36.11:435,36,0
chr10	82186857	.	CAT	C	5808.19	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-1.772;DP=688;FS=0.000;HRun=0;HaplotypeScore=106.0489;InbreedingCoeff=0.9968;MQ=91.55;MQ0=1;MQRankSum=-1.674;QD=42.09;ReadPosRankSum=0.543;VQSLOD=6.4383;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,151,2780	0/0:5,0:5:15.05:0,15,281	0/0:24,0:24:69.20:0,69,1226	0/0:34,0:34:96.31:0,96,1715	0/0:27,0:27:78.27:0,78,1460	0/0:20,0:20:57.20:0,57,1067	0/0:26,0:26:78.27:0,78,1451	1/1:3,19:21:57.19:838,57,0	0/0:25,0:25:72.25:0,72,1348	0/0:29,0:29:84.29:0,84,1571	0/0:15,0:15:45.15:0,45,842	0/0:21,0:21:63.22:0,63,1179	0/0:26,0:26:78:0,78,1416	0/0:27,0:27:78.27:0,78,1461	0/0:26,0:26:75.24:0,75,1370	0/0:20,0:20:60.19:0,60,1092	0/0:36,0:36:99:0,102,1910	0/0:24,0:24:69.22:0,69,1261	1/1:1,23:24:69.21:994,69,0	1/1:0,29:29:87.29:1281,87,0	0/0:21,0:21:54.18:0,54,1002	0/0:19,0:19:57.20:0,57,1068	0/0:28,0:28:81.28:0,81,1516	0/0:30,0:30:87.28:0,87,1586	0/0:16,0:16:48.16:0,48,899	1/1:0,26:25:75.25:1104,75,0	1/1:0,23:23:69.23:1016,69,0	1/1:1,13:14:39.13:574,39,0
chr10	82187620	.	CTATGTATG	C	8042.60	PASS	AB=0.660;AC=36;AF=0.692;AN=52;BaseQRankSum=-5.220;DP=721;FS=1.144;HRun=0;HaplotypeScore=221.9573;InbreedingCoeff=0.7263;MQ=69.58;MQ0=3;MQRankSum=-7.339;QD=17.04;ReadPosRankSum=-0.347;VQSLOD=3.9303;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,9:35:4.62:135,5,0	1/1:3,4:7:9.03:219,9,0	./.	./.	1/1:11,12:23:30.02:587,30,0	1/1:10,5:15:15.05:369,15,0	0/0:26,0:26:30.10:0,30,977	0/0:46,0:45:6.02:0,6,79	1/1:12,20:32:39.13:959,39,0	1/1:23,11:34:33.07:669,33,0	1/1:8,6:14:12.04:267,12,0	1/1:19,14:33:27.09:660,27,0	0/0:14,0:26:29.92:0,30,240	0/0:16,0:29:41.82:0,42,331	1/1:15,17:32:39.13:940,39,0	1/1:17,9:26:21.07:520,21,0	1/1:10,8:18:12.04:291,12,0	1/1:9,1:10:3.01:69,3,0	0/0:15,0:23:23.97:0,24,223	0/0:17,0:30:41.92:0,42,372	1/1:30,11:41:5.78:70,6,0	0/1:9,1:20:46.51:47,0,238	1/1:15,14:29:39.03:840,39,0	0/1:15,14:29:4.61:181,0,5	1/1:11,14:25:18.06:431,18,0	1/1:11,8:19:24.05:493,24,0	0/0:7,0:16:23.94:0,24,193	1/1:23,7:30:12.04:297,12,0
chr10	82189242	.	T	TCACACACA	11404.96	PASS	AB=0.741;AC=49;AF=0.942;AN=52;BaseQRankSum=-1.473;DP=628;FS=0.000;HRun=0;HaplotypeScore=231.2034;InbreedingCoeff=0.3222;MQ=60.54;MQ0=7;MQRankSum=-0.992;QD=20.66;ReadPosRankSum=1.783;VQSLOD=4.0589;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:37,1:39:12.95:307,13,0	1/1:14,0:14:3.90:76,4,0	0/0:22,0:15:2.98:0,3,22	./.	./.	1/1:18,4:23:5.55:187,6,0	1/1:21,0:26:15.48:486,15,0	1/1:20,0:20:18.06:492,18,0	1/1:18,3:23:15.52:487,16,0	1/1:17,0:15:21.51:455,22,0	0/1:13,4:20:0.01:0,0,0	1/1:16,10:30:21.02:702,21,0	1/1:24,1:28:24.08:667,24,0	1/1:18,0:22:8.92:296,9,0	1/1:11,4:18:8.81:271,9,0	1/1:27,8:37:38.25:1309,38,0	1/1:14,7:22:24.04:784,24,0	1/1:11,3:16:15.05:446,15,0	1/1:21,0:22:18.06:537,18,0	1/1:21,0:21:2.61:88,3,0	1/1:8,0:12:3.01:104,3,0	1/1:15,0:21:5.97:208,6,0	1/1:11,8:19:4.90:245,5,0	1/1:11,3:16:5.97:247,6,0	1/1:18,8:27:23.57:839,24,0	1/1:23,0:23:30.09:785,30,0	1/1:21,0:28:39.13:1174,39,0	1/1:4,0:5:6.02:214,6,0
chr10	82190462	.	GC	G	3807.95	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.749;DP=735;FS=3.360;HRun=3;HaplotypeScore=69.4364;InbreedingCoeff=0.9780;MQ=87.39;MQ0=0;MQRankSum=-1.792;QD=33.40;ReadPosRankSum=0.259;VQSLOD=4.0545;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,166,2338	0/0:8,0:8:21.07:0,21,302	0/0:20,0:20:57.19:0,57,814	0/0:32,0:32:93.14:0,93,1215	0/0:22,0:22:66.21:0,66,930	0/0:22,0:22:66.22:0,66,950	0/0:41,0:41:99:0,117,1610	1/1:1,24:25:72.14:857,72,0	0/0:28,0:28:84.26:0,84,1171	0/0:37,0:37:99:0,105,1510	0/0:20,0:19:57.18:0,57,802	0/0:24,0:24:72.23:0,72,1017	0/0:32,0:32:96.28:0,96,1325	0/0:26,0:26:78.26:0,78,1122	0/0:35,0:35:99:0,102,1447	0/0:20,0:20:57.18:0,57,802	0/0:39,0:39:99:0,114,1640	0/0:23,0:23:69.22:0,69,971	1/1:0,18:18:54.17:668,54,0	1/1:0,15:15:39.12:483,39,0	0/0:26,0:26:72.23:0,72,1017	0/0:26,0:26:78.25:0,78,1100	0/0:32,0:32:87.28:0,87,1232	0/0:22,0:22:63.20:0,63,886	0/0:29,0:29:87.28:0,87,1232	1/1:3,17:20:7.93:537,8,0	1/1:0,32:32:90.28:1113,90,0	1/1:0,4:4:12.04:149,12,0
chr10	82191839	.	TC	T	16632.97	PASS	AB=0.889;AC=39;AF=0.696;AN=56;BaseQRankSum=8.528;DP=652;FS=11.984;HRun=2;HaplotypeScore=68.8209;InbreedingCoeff=0.9141;MQ=83.04;MQ0=0;MQRankSum=-2.103;QD=34.80;ReadPosRankSum=5.713;VQSLOD=4.1789;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.22:0,69,1008	1/1:0,10:10:18.06:234,18,0	0/0:17,0:17:36.71:0,37,630	0/0:24,0:23:66.19:0,66,947	1/1:1,15:16:42.13:534,42,0	1/1:0,14:14:42.14:542,42,0	1/1:0,32:32:90.29:1169,90,0	0/0:23,0:23:69.21:0,69,994	1/1:0,22:22:66.21:853,66,0	1/1:3,11:14:30.08:373,30,0	1/1:0,11:11:30.10:382,30,0	1/1:0,32:32:93.30:1207,93,0	1/1:2,35:37:99:1316,102,0	1/1:1,30:31:87.28:1125,87,0	1/1:1,30:31:90.29:1169,90,0	1/1:0,25:25:72.23:935,72,0	1/1:0,32:32:90.29:1169,90,0	1/1:0,25:25:69.22:896,69,0	0/0:17,0:17:51.16:0,51,744	0/0:19,0:19:57.18:0,57,831	1/1:0,55:55:99:2103,163,0	1/1:0,14:14:39.13:503,39,0	1/1:0,13:13:33.11:425,33,0	1/1:1,33:34:93.30:1205,93,0	1/1:0,14:14:36.12:464,36,0	0/1:14,2:16:29.77:30,0,581	0/0:29,0:28:87.29:0,87,1303	0/0:21,0:21:60.19:0,60,876
chr10	82195428	.	AAAAAAAAAAAAAAC	A	2253.36	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=11.954;DP=583;FS=5.181;HRun=0;HaplotypeScore=204.9270;InbreedingCoeff=-0.1211;MQ=60.13;MQ0=17;MQRankSum=-6.635;QD=6.69;ReadPosRankSum=9.901;VQSLOD=0.9318;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:42:99:0,111,4927	0/1:8,0:8:8.53:9,0,132	0/0:46,0:11:20.64:0,21,646	0/0:24,0:9:15.96:0,16,323	0/0:26,0:26:4.05:0,4,618	0/1:20,0:20:0.07:0,0,327	1/1:10,2:12:15.62:339,16,0	0/0:29,0:29:80.09:0,80,3470	0/1:18,0:18:55.97:56,0,196	0/1:21,0:20:99:116,0,423	0/1:24,0:23:80.49:80,0,401	0/1:15,0:15:48.97:49,0,219	1/1:8,12:20:5.35:382,5,0	1/1:9,17:25:7.80:372,8,0	0/1:19,0:19:99:191,0,246	0/1:29,0:28:99:242,0,250	0/1:20,0:20:64.73:65,0,204	0/1:16,0:16:42.83:43,0,318	0/0:16,0:15:45.15:0,45,2264	0/0:15,0:14:39.13:0,39,1825	0/1:11,0:11:12.54:13,0,61	1/1:21,0:21:18.42:345,18,0	0/1:22,0:22:20.60:21,0,307	0/1:10,0:10:16.72:17,0,54	0/1:16,0:16:44.95:45,0,420	0/0:27,0:26:37.19:0,37,543	0/0:19,0:16:48.16:0,48,2062	0/1:9,0:8:43.10:43,0,44
chr10	82195429	.	AAAAAAAAAAAAAC	A	2947.76	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=11.587;DP=587;FS=5.775;HRun=0;HaplotypeScore=194.6426;InbreedingCoeff=-0.1880;MQ=60.88;MQ0=17;MQRankSum=-5.595;QD=8.12;ReadPosRankSum=9.402;VQSLOD=0.9655;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:43:99:0,114,4464	0/1:7,0:7:29.26:29,0,86	0/0:47,0:12:21.44:0,21,581	0/0:26,0:10:16.74:0,17,301	0/1:25,0:25:27.29:27,0,413	0/1:19,0:19:24.99:25,0,231	1/1:15,0:15:25.88:368,26,0	0/0:29,0:29:79.83:0,80,3226	0/1:17,0:17:81.38:81,0,151	0/1:23,0:22:99:183,0,357	0/1:23,0:22:99:148,0,287	0/1:15,0:15:86.20:86,0,155	1/1:19,1:20:6.26:355,6,0	1/1:24,0:23:14.72:326,15,0	0/1:19,0:19:99:290,0,171	0/1:30,0:29:99:392,0,189	0/1:19,0:19:99:120,0,111	0/1:16,0:16:81.34:81,0,233	0/0:16,0:15:45.15:0,45,2058	0/0:15,0:14:39.13:0,39,1664	0/1:13,0:13:19.06:19,0,85	1/1:8,12:20:20.25:374,20,0	0/1:23,0:23:58.76:59,0,232	0/1:11,0:11:26.11:26,0,62	0/1:17,0:17:66.65:67,0,297	0/0:27,0:26:19.02:0,19,427	0/0:19,0:16:48.15:0,48,1848	0/1:7,0:6:48.66:69,0,49
chr10	82195431	.	AAAAAAAAAAAC	A	4490.72	PASS	AB=0.980;AC=25;AF=0.446;AN=56;BaseQRankSum=11.445;DP=552;FS=9.617;HRun=0;HaplotypeScore=161.6306;InbreedingCoeff=-0.2407;MQ=62.41;MQ0=17;MQRankSum=-6.498;QD=12.72;ReadPosRankSum=8.888;VQSLOD=1.5096;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:99:0,114,3510	0/1:6,0:6:42.58:87,0,43	0/0:49,0:14:17.57:0,18,509	0/0:25,0:9:17.03:0,17,280	0/1:26,0:26:99:113,0,155	0/1:18,0:18:76.23:76,0,138	1/1:9,0:9:23.96:327,24,0	0/0:29,0:29:79.25:0,79,2715	0/1:10,5:15:99:115,0,103	0/1:23,0:22:99:320,0,217	0/1:18,1:18:60.27:323,0,60	0/1:14,0:14:91.29:169,0,91	1/1:15,0:15:10.04:304,10,0	1/1:20,0:19:12.55:262,13,0	0/1:20,0:20:99:414,0,123	0/1:28,1:28:99:742,0,120	0/1:17,0:17:56.54:234,0,57	0/1:14,0:14:99:178,0,118	0/0:17,0:16:48.04:0,48,1700	0/0:15,0:14:39.13:0,39,1394	0/1:13,0:13:50.08:50,0,72	1/1:15,0:15:22.09:311,22,0	0/1:19,0:19:92.47:153,0,92	0/1:10,0:10:41.38:55,0,41	0/1:18,0:18:84.28:84,0,171	0/1:25,0:24:40.38:40,0,215	0/0:19,0:16:46.93:0,47,1445	0/1:8,0:7:14.97:133,0,15
chr10	82196954	.	CCA	C	3391.66	PASS	AB=0.749;AC=46;AF=0.885;AN=52;BaseQRankSum=-3.353;DP=557;FS=11.461;HRun=0;HaplotypeScore=87.6294;InbreedingCoeff=0.3221;MQ=68.47;MQ0=10;MQRankSum=-0.119;QD=7.44;ReadPosRankSum=-2.142;VQSLOD=1.9331;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:30:0.20:48,0,0	1/1:3,4:7:5.85:65,6,0	./.	./.	0/1:5,6:11:26.71:27,0,39	1/1:13,13:27:14.87:145,15,0	1/1:15,3:27:17.88:177,18,0	1/1:17,0:19:2.84:15,3,0	1/1:10,6:15:3.01:33,3,0	1/1:17,1:17:32.69:299,33,0	1/1:4,6:11:2.35:32,2,0	1/1:7,2:13:11.87:112,12,0	1/1:8,7:15:15.04:164,15,0	1/1:9,9:19:20.89:210,21,0	1/1:7,9:17:20.85:197,21,0	1/1:15,5:25:50.20:429,50,0	1/1:17,18:35:3.51:209,4,0	1/1:14,4:19:12.75:240,13,0	1/1:19,0:18:5.39:23,5,0	1/1:16,0:16:4.98:24,5,0	1/1:13,0:14:20.98:210,21,0	1/1:4,4:7:6.49:66,6,0	1/1:10,3:14:17.88:178,18,0	1/1:20,17:38:26.90:276,27,0	0/1:13,1:17:32.82:174,0,33	0/0:15,0:15:23.71:0,24,233	1/1:17,0:17:8.50:40,8,0	0/0:7,0:13:14.99:0,15,129
chr10	82196990	.	ACACACACT	A	1748.02	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-1.743;DP=630;FS=24.017;HRun=0;HaplotypeScore=171.6098;InbreedingCoeff=0.8613;MQ=58.16;MQ0=14;MQRankSum=-1.500;QD=15.47;ReadPosRankSum=-0.972;VQSLOD=1.3998;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:50.68:51,0,293	0/0:9,0:8:18.48:0,18,252	0/0:29,0:14:32.78:0,33,401	0/0:23,0:14:32.63:0,33,277	0/0:19,0:19:35.91:0,36,556	0/0:28,0:28:54.20:0,54,687	0/0:29,0:29:50.54:0,51,532	1/1:27,0:28:71.11:645,71,0	0/0:23,0:22:47.83:0,48,509	0/0:23,0:22:63.08:0,63,944	0/0:15,0:15:22.71:0,23,248	0/0:16,0:16:32.42:0,32,493	0/0:18,0:18:45.09:0,45,682	0/0:23,0:23:50.88:0,51,621	0/0:22,0:22:50.10:0,50,764	0/0:24,0:24:68.72:0,69,1130	0/0:45,0:44:90.31:0,90,1317	0/0:20,0:20:46.05:0,46,884	1/1:4,12:13:28.14:344,28,0	1/1:7,13:17:18:287,18,0	0/0:27,0:26:68.82:0,69,993	0/0:13,0:12:20.74:0,21,277	0/0:14,0:14:35.89:0,36,577	0/0:43,0:43:84.05:0,84,1352	0/0:18,0:18:30.75:0,31,727	0/0:21,0:20:55.28:0,55,1111	1/1:15,3:18:43.74:586,44,0	0/0:15,0:14:29.93:0,30,705
chr10	82198385	.	GAC	G	1965.08	PASS	AB=0.840;AC=35;AF=0.673;AN=52;BaseQRankSum=3.608;DP=614;FS=2.339;HRun=0;HaplotypeScore=84.5192;InbreedingCoeff=0.0723;MQ=66.34;MQ0=8;MQRankSum=-0.909;QD=4.13;ReadPosRankSum=3.238;VQSLOD=1.9488;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:40,4:44:5.66:6,0,223	1/1:7,0:7:10.09:74,10,0	./.	0/0:25,0:21:0.47:0,0,1	1/1:7,3:10:3.01:32,3,0	0/1:14,5:20:7.35:69,0,7	1/1:15,0:23:6.15:28,6,0	./.	1/1:10,6:17:14.87:144,15,0	1/1:16,4:19:4.02:110,4,0	1/1:9,4:13:8.81:78,9,0	1/1:18,5:23:3.01:32,3,0	0/1:13,2:15:23.45:23,0,76	0/1:20,0:22:15.18:15,0,230	1/1:10,8:18:14.86:140,15,0	1/1:19,10:31:30.53:288,31,0	1/1:14,3:21:20.38:153,20,0	1/1:21,12:32:26.49:251,26,0	0/1:18,0:25:13.64:14,0,50	0/1:15,0:19:16.23:19,0,16	0/1:25,2:27:5.70:78,0,6	0/0:15,0:15:2.85:0,3,167	1/1:7,9:16:9.02:97,9,0	0/1:22,9:32:9.60:271,0,10	0/1:14,3:19:18.71:151,0,19	0/0:13,0:27:36.05:0,36,274	1/1:13,0:18:5.85:46,6,0	0/0:18,0:18:11.43:0,11,89
chr10	82198750	.	GCAGATAGCCCTGACATGGA	G	1923.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.247;DP=760;FS=9.547;HRun=0;HaplotypeScore=386.5909;InbreedingCoeff=0.9969;MQ=85.99;MQ0=0;MQRankSum=-6.277;QD=38.47;ReadPosRankSum=0.695;VQSLOD=1.0541;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,39:50:42.14:2018,42,0	0/0:9,0:9:24.08:0,24,1936	0/0:27,0:27:57.11:0,57,2707	0/0:24,0:24:42.08:0,42,2192	0/0:27,0:27:66.21:0,66,5049	0/0:22,0:22:54.15:0,54,3660	0/0:28,0:28:54.17:0,54,4135	0/0:29,0:29:63.22:0,63,4440	0/0:32,0:32:81.25:0,81,5798	0/0:26,0:26:66.23:0,66,5442	0/0:26,0:26:60.21:0,60,4850	0/0:18,0:18:42.14:0,42,3731	0/0:31,0:31:78.27:0,78,6186	0/0:31,0:31:75.23:0,75,5741	0/0:38,0:38:90.27:0,90,6888	0/0:36,0:36:90.31:0,90,7379	0/0:22,0:22:63.22:0,63,5403	0/0:24,0:24:60.19:0,60,4632	0/0:21,0:21:54.17:0,54,3906	0/0:24,0:24:51.16:0,51,3809	0/0:42,0:42:99:0,114,8711	0/0:30,0:30:84.26:0,84,5946	0/0:14,0:14:27.09:0,27,2337	0/0:24,0:24:60.21:0,60,4754	0/0:27,0:27:72.22:0,72,5519	0/0:25,0:25:66.23:0,66,5415	0/0:33,0:33:93.29:0,93,7374	0/0:20,0:20:60.18:0,60,4311
chr10	82200280	.	TC	T	14459.30	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.208;DP=626;FS=5.419;HRun=7;HaplotypeScore=78.2858;InbreedingCoeff=0.9955;MQ=84.43;MQ0=0;MQRankSum=-9.185;QD=24.80;ReadPosRankSum=5.045;VQSLOD=5.3360;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,44:48:99:1161,114,0	1/1:3,9:12:24.05:244,24,0	0/0:13,0:13:25.46:0,25,303	0/0:30,0:30:71.92:0,72,755	1/1:4,12:16:39.01:379,39,0	1/1:2,19:21:51.11:520,51,0	1/1:3,27:30:69.15:704,69,0	1/1:3,23:26:66.08:646,66,0	1/1:3,13:16:36.08:367,36,0	1/1:5,17:22:57.11:576,57,0	1/1:2,13:15:30.03:293,30,0	1/1:1,18:19:45.10:459,45,0	1/1:0,26:26:65.99:662,66,0	1/1:1,29:30:81.18:824,81,0	1/1:1,25:26:60.12:612,60,0	1/1:1,18:19:51.12:520,51,0	1/1:2,30:32:78.18:795,78,0	1/1:0,15:15:39.09:398,39,0	1/1:4,20:24:59.89:575,60,0	1/1:2,26:28:72.07:710,72,0	1/1:5,22:27:78.04:760,78,0	1/1:3,15:18:35.95:342,36,0	1/1:4,13:17:39.08:392,39,0	1/1:0,21:21:60.14:612,60,0	1/1:1,22:23:60.08:599,60,0	1/1:2,25:27:74.81:730,75,0	1/1:3,14:17:36.08:366,36,0	1/1:1,7:8:21.05:214,21,0
chr10	82200658	.	C	CGTTGTTGTTGTT	29640.08	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-2.772;DP=889;FS=3.354;HRun=0;HaplotypeScore=271.2272;InbreedingCoeff=0.8752;MQ=68.41;MQ0=3;MQRankSum=-7.653;QD=38.95;ReadPosRankSum=0.700;VQSLOD=4.3358;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:16.26:0,16,1025	1/1:18,0:18:31.66:739,32,0	0/0:36,0:31:5.53:0,6,127	0/0:37,0:33:21.06:0,21,349	1/1:13,9:23:13.85:360,14,0	1/1:13,10:25:30.10:1439,30,0	1/1:16,0:29:18.06:798,18,0	1/1:45,0:42:72.23:1977,72,0	1/1:15,14:31:27.09:1545,27,0	1/1:18,13:31:54.10:1802,54,0	1/1:9,0:16:9.03:363,9,0	1/1:20,9:29:18.06:874,18,0	1/1:31,0:49:44.91:2097,45,0	1/1:15,0:36:36.12:1775,36,0	1/1:31,18:51:48.16:2296,48,0	1/1:21,18:41:45.63:2148,46,0	1/1:18,6:26:24.97:1184,25,0	1/1:13,5:19:18.06:969,18,0	1/1:23,0:23:13.59:392,14,0	1/1:24,0:24:30.03:539,30,0	1/1:34,0:34:40.26:689,40,0	1/1:23,0:44:33:1157,33,0	1/1:13,5:20:13.29:373,13,0	1/1:24,11:39:43.50:1790,44,0	1/1:11,9:23:24.08:978,24,0	1/1:18,0:34:57.13:1452,57,0	1/1:33,0:33:69.16:1706,69,0	1/1:8,0:17:7.84:198,8,0
chr10	82200690	.	T	TTGC	3216.83	PASS	AB=0.996;AC=26;AF=0.464;AN=56;BaseQRankSum=4.813;DP=718;FS=4.486;HRun=0;HaplotypeScore=162.6526;InbreedingCoeff=-0.1187;MQ=62.54;MQ0=2;MQRankSum=-6.261;QD=6.13;ReadPosRankSum=1.965;VQSLOD=2.9105;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,45:59:36.21:1298,36,0	0/0:20,0:20:29.67:0,30,236	0/0:25,0:20:37.37:0,37,418	0/0:46,0:41:82.18:0,82,870	0/0:17,0:17:9.88:0,10,236	0/1:21,0:20:75.27:75,0,206	0/0:18,0:18:28.66:0,29,303	1/1:45,0:42:44.62:370,45,0	0/1:15,0:15:80.06:85,0,80	0/1:27,0:27:8.32:8,0,413	0/1:12,0:12:18.32:18,0,111	0/1:13,0:14:16.45:16,0,161	0/0:30,0:30:47.94:0,48,463	0/1:23,0:23:21.36:21,0,297	0/1:31,0:31:69.63:70,0,384	0/1:27,0:27:89.25:89,0,255	0/1:20,0:20:29.25:29,0,129	0/1:16,0:16:11.43:11,0,186	1/1:23,0:23:41.81:369,42,0	1/1:22,0:21:32.75:256,33,0	0/0:37,0:37:13.20:0,13,273	0/1:29,0:29:5.25:5,0,402	0/1:15,0:15:11.97:12,0,142	0/1:36,0:36:12.09:12,0,281	0/1:15,0:14:52:52,0,107	0/1:29,0:29:64.04:64,0,269	1/1:33,0:34:59.64:519,60,0	0/1:12,0:12:18.69:19,0,80
chr10	82202296	.	C	CT	142.85	PASS	AB=0.892;AC=3;AF=0.058;AN=52;BaseQRankSum=1.052;DP=786;FS=6.079;HRun=0;HaplotypeScore=282.3475;InbreedingCoeff=0.2026;MQ=44.08;MQ0=12;MQRankSum=-2.722;QD=1.83;ReadPosRankSum=-1.953;VQSLOD=1.8638;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:38:14.63:0,15,215	0/0:9,0:9:11.97:0,12,142	0/0:52,0:14:16.73:0,17,448	0/1:58,0:12:2.54:3,0,271	0/0:23,0:23:42.61:0,43,583	0/0:30,0:30:45.66:0,46,620	0/0:30,0:30:35.96:0,36,514	0/1:5,4:9:23.65:217,0,24	0/0:25,0:25:38.30:0,38,473	0/0:39,0:38:99:0,111,1482	0/0:18,0:18:30.96:0,31,399	0/0:27,0:27:50.82:0,51,605	0/0:31,0:31:50.42:0,50,702	0/0:35,0:35:38.83:0,39,530	0/0:39,0:39:53.92:0,54,674	0/0:38,0:37:55.95:0,56,727	0/0:25,0:25:54.54:0,55,702	0/0:15,0:15:33.84:0,34,397	0/1:10,0:9:0.05:0,0,0	./.	0/0:52,0:52:60.81:0,61,761	0/0:27,0:27:35.25:0,35,450	0/0:25,0:25:42.19:0,42,548	0/0:40,0:39:32.34:0,32,429	0/0:32,0:32:43.21:0,43,507	0/0:26,0:26:78.26:0,78,1069	./.	0/0:15,0:15:35.16:0,35,412
chr10	82202300	.	CATACAA	C	1320.32	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=-2.228;DP=864;FS=10.689;HRun=0;HaplotypeScore=331.2908;InbreedingCoeff=0.8165;MQ=46.69;MQ0=13;MQRankSum=-6.775;QD=20.63;ReadPosRankSum=-0.568;VQSLOD=1.5193;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:2.88:0,3,498	0/0:11,0:11:16.05:0,16,343	0/0:59,0:16:32.96:0,33,639	0/0:66,0:18:25.18:0,25,518	0/0:24,0:24:49.86:0,50,924	0/0:32,0:32:65.14:0,65,1175	0/0:33,0:32:50.31:0,50,943	1/1:21,0:23:32.93:753,33,0	0/0:27,0:27:53.50:0,53,954	0/0:41,0:40:70.81:0,71,2476	0/0:19,0:19:37.62:0,38,635	0/0:26,0:26:56.65:0,57,920	0/0:33,0:33:42.96:0,43,1071	0/0:38,0:38:66.73:0,67,935	0/0:39,0:39:58.42:0,58,1341	0/0:39,0:38:56.58:0,57,1150	0/0:24,0:24:21.22:0,21,726	0/0:15,0:15:20.74:0,21,512	1/1:1,9:9:27.01:341,27,0	./.	0/0:57,0:58:99:0,100,1651	0/0:28,0:28:53.14:0,53,859	0/0:28,0:28:57.99:0,58,1155	0/0:41,0:40:53.16:0,53,747	0/0:32,0:32:51.69:0,52,948	0/0:29,0:29:31.19:0,31,1625	1/1:16,0:16:33.47:365,33,0	0/1:15,0:15:4.72:5,0,365
chr10	82203772	.	TACAC	T	982.90	PASS	AB=0.932;AC=30;AF=0.714;AN=42;BaseQRankSum=0.777;DP=325;FS=2.699;HRun=0;HaplotypeScore=59.9409;InbreedingCoeff=0.3988;MQ=64.68;MQ0=11;MQRankSum=-0.034;QD=5.49;ReadPosRankSum=2.037;VQSLOD=1.2642;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:20:3:28,3,0	./.	./.	./.	./.	1/1:11,0:11:2.74:39,3,0	0/0:18,0:19:8.50:0,8,67	./.	1/1:7,0:7:3.01:47,3,0	1/1:7,0:7:3.01:45,3,0	./.	./.	0/0:9,0:9:6.18:0,6,33	0/0:13,0:13:9.01:0,9,187	1/1:9,0:8:3.01:46,3,0	1/1:11,1:12:3.01:47,3,0	1/1:12,4:15:12.04:186,12,0	1/1:8,4:12:6.07:135,6,0	1/1:14,0:14:1.36:3,1,0	1/1:4,0:5:2.87:28,3,0	0/1:17,0:17:6.60:16,0,7	0/0:6,0:6:12.03:0,12,165	1/1:3,1:4:3.01:47,3,0	1/1:15,7:22:18.06:279,18,0	1/1:4,3:7:9.03:140,9,0	0/1:10,0:10:6.69:7,0,7	1/1:3,0:4:3:28,3,0	0/0:4,0:9:8.23:0,8,37
chr10	82203843	.	CT	C	3009.82	PASS	AB=0.651;AC=43;AF=0.768;AN=56;BaseQRankSum=0.292;DP=342;FS=11.282;HRun=14;HaplotypeScore=46.1517;InbreedingCoeff=0.2016;MQ=64.58;MQ0=13;MQRankSum=0.895;QD=9.90;ReadPosRankSum=2.995;VQSLOD=2.0207;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:15:23:0,23,134	0/1:2,5:8:8.04:83,0,8	0/0:15,0:9:6.32:0,6,42	0/0:8,0:7:0:0,0,0	0/1:6,8:17:1.13:114,0,1	1/1:3,6:8:17.85:123,18,0	0/1:7,4:10:15.88:50,0,16	1/1:12,11:22:7.70:195,8,0	1/1:6,7:12:26.11:172,26,0	1/1:7,6:15:18.87:113,19,0	1/1:1,6:7:14.86:103,15,0	1/1:3,3:6:14.82:101,15,0	0/1:4,5:10:11.69:87,0,12	1/1:2,6:8:11.89:82,12,0	1/1:3,7:12:22.63:149,23,0	0/1:5,7:12:10.94:71,0,11	0/1:7,11:18:13.38:205,0,13	1/1:5,4:8:16.89:107,17,0	1/1:6,6:11:18.70:126,19,0	1/1:2,9:12:28.58:182,29,0	1/1:7,5:11:13.90:88,14,0	0/1:6,2:10:29.87:30,0,45	1/1:2,9:11:25.83:170,26,0	1/1:4,7:11:22.77:150,23,0	1/1:5,7:12:17.80:123,18,0	1/1:3,11:14:35.46:239,35,0	1/1:6,7:13:19.85:129,20,0	1/1:5,9:13:5.99:169,6,0
chr10	82209084	.	CCAGAATGTGTG	C	8722.67	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=14.925;DP=746;FS=1.858;HRun=0;HaplotypeScore=243.4598;InbreedingCoeff=0.9983;MQ=90.86;MQ0=0;MQRankSum=-11.515;QD=74.55;ReadPosRankSum=0.760;VQSLOD=4.6456;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.32:0,93,4625	0/0:17,0:17:48.16:0,48,2544	0/0:33,0:33:81.74:0,82,3762	0/0:30,0:30:66.20:0,66,2995	0/0:27,0:27:75.26:0,75,3957	0/0:31,0:31:87.28:0,87,4383	0/0:36,0:36:99:0,102,4985	1/1:6,26:32:81.28:2456,81,0	0/0:27,0:27:72.25:0,72,4031	0/0:34,0:34:90.31:0,90,4970	0/0:15,0:15:45.15:0,45,2266	0/0:25,0:25:75.26:0,75,3995	0/0:37,0:37:99:0,108,5823	0/0:27,0:27:75.26:0,75,3845	0/0:32,0:32:87.30:0,87,4472	0/0:23,0:23:66.20:0,66,3083	0/0:24,0:24:57.20:0,57,3077	0/0:12,0:12:36.12:0,36,1897	1/1:5,19:24:57.20:1729,57,0	1/1:5,20:25:51.18:1732,51,0	0/0:35,0:35:99:0,99,5427	0/0:33,0:33:90.31:0,90,4789	0/0:9,0:9:24.07:0,24,1201	0/0:26,0:26:66.23:0,66,3695	0/0:22,0:22:57.20:0,57,3192	0/0:34,0:34:96.33:0,96,5090	1/1:1,35:36:84.29:2807,84,0	0/0:7,0:7:21.07:0,21,1175
chr10	82209965	.	AAAAAG	A	9304.80	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=6.491;DP=433;FS=8.396;HRun=0;HaplotypeScore=78.4201;InbreedingCoeff=0.9273;MQ=65.80;MQ0=0;MQRankSum=-3.220;QD=31.87;ReadPosRankSum=5.134;VQSLOD=3.3209;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.22:0,69,1863	1/1:1,5:6:15.05:268,15,0	0/0:17,0:10:29.98:0,30,544	0/0:19,0:10:10.48:0,10,199	1/1:4,16:20:42.14:769,42,0	1/1:2,14:16:27.09:523,27,0	1/1:2,9:11:12.03:199,12,0	0/0:32,0:32:78.25:0,78,1944	1/1:0,11:11:27.09:501,27,0	1/1:0,19:19:54.16:944,54,0	1/1:4,16:20:36.08:610,36,0	1/1:0,9:9:9.03:174,9,0	1/1:1,5:6:15.05:290,15,0	1/1:2,9:11:18.06:327,18,0	1/1:1,10:11:15.05:290,15,0	1/1:1,9:10:15.05:291,15,0	1/1:10,26:36:45.15:871,45,0	1/1:3,15:17:21.07:384,21,0	0/0:14,0:14:36.12:0,36,921	0/0:12,0:12:24.08:0,24,626	1/1:1,5:6:6.02:116,6,0	1/1:0,4:4:12.04:185,12,0	1/1:2,8:10:20.90:382,21,0	1/1:3,5:8:9.03:174,9,0	1/1:1,21:22:33.11:639,33,0	1/1:4,13:17:36.12:663,36,0	0/0:21,0:21:60.21:0,60,1615	1/1:0,21:21:42.09:705,42,0
chr10	82211457	.	G	GCTCTTTATTCTCTGTGG	30198.04	PASS	AB=0.923;AC=49;AF=0.875;AN=56;BaseQRankSum=-5.491;DP=317;FS=8.118;HRun=0;HaplotypeScore=361.7571;InbreedingCoeff=-0.1294;MQ=69.70;MQ0=0;MQRankSum=0.933;QD=95.26;ReadPosRankSum=-0.563;VQSLOD=3.3656;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:4:4.90:173,0,5	1/1:3,0:3:9.03:561,9,0	0/1:5,1:5:10.42:1123,0,10	0/1:7,0:6:61.54:993,0,62	1/1:18,0:18:13.31:1167,13,0	1/1:15,0:15:27.91:1665,28,0	0/1:11,0:11:12.72:765,0,13	1/1:13,0:13:33.01:1262,33,0	1/1:13,0:13:35.77:1374,36,0	1/1:21,0:21:37.17:2346,37,0	0/1:9,0:8:1.36:987,0,1	0/1:11,0:11:1.35:866,0,1	1/1:12,0:12:20.53:1261,21,0	1/1:14,0:14:26.41:1325,26,0	1/1:17,0:17:21.61:1722,22,0	1/1:15,0:15:37.54:1298,38,0	1/1:5,0:5:9.03:213,9,0	1/1:6,0:6:14.72:819,15,0	1/1:5,0:5:15.05:595,15,0	1/1:22,0:22:19.08:2323,19,0	1/1:9,0:9:12.04:421,12,0	1/1:11,0:11:10.79:328,11,0	1/1:18,0:18:42.23:2003,42,0	1/1:5,0:5:9.03:555,9,0	0/1:8,0:8:6.47:507,0,6	1/1:13,0:13:18.59:1326,19,0	1/1:18,0:18:25.25:1939,25,0	1/1:2,0:2:6.02:278,6,0
chr10	82216535	.	A	AT	2720	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-11.254;DP=578;FS=2.581;HRun=8;HaplotypeScore=53.7332;InbreedingCoeff=0.9851;MQ=73.45;MQ0=0;MQRankSum=-0.987;QD=26.93;ReadPosRankSum=-2.332;VQSLOD=3.5254;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.05:0,93,851	0/0:15,0:15:42.02:0,42,384	0/0:13,0:13:26.95:0,27,233	0/0:12,0:11:20.96:0,21,177	0/0:31,0:31:86.99:0,87,782	0/0:16,0:16:42.02:0,42,384	0/0:10,0:10:27.01:0,27,247	1/1:3,26:29:78.22:889,78,0	0/0:21,0:21:54.03:0,54,494	0/0:19,0:19:42:0,42,380	0/0:26,0:26:66.03:0,66,604	0/0:28,0:28:78.02:0,78,708	0/0:21,0:21:51.02:0,51,467	0/0:17,0:17:51:0,51,458	0/0:22,0:22:60.02:0,60,545	0/0:22,0:22:63.02:0,63,572	0/0:19,0:19:45.01:0,45,412	0/0:20,0:20:51.03:0,51,467	1/1:3,15:18:45.11:498,45,0	1/1:3,24:27:69.21:796,69,0	0/0:5,0:5:15.01:0,15,137	0/0:18,0:18:50.05:0,50,441	0/0:25,0:25:32.43:0,32,543	0/0:16,0:16:35.96:0,36,321	0/0:38,0:38:99:0,99,906	0/0:27,0:27:75.01:0,75,677	1/1:5,22:26:39.49:697,39,0	0/0:5,0:5:12.01:0,12,110
chr10	82218332	.	T	TG	2058.09	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-3.733;DP=539;FS=12.295;HRun=7;HaplotypeScore=60.1619;InbreedingCoeff=0.9873;MQ=81.84;MQ0=0;MQRankSum=-2.074;QD=23.93;ReadPosRankSum=-0.211;VQSLOD=2.7722;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:88.01:0,88,842	0/0:11,0:11:24.04:0,24,232	0/0:15,0:15:24.88:0,25,338	0/0:17,0:18:21.27:0,21,334	0/0:15,0:15:39.05:0,39,371	0/0:17,0:17:39.06:0,39,376	0/0:22,0:22:60.09:0,60,579	1/1:11,14:25:30.08:351,30,0	0/0:13,0:13:27.04:0,27,261	0/0:18,0:18:51.07:0,51,489	0/0:13,0:13:39.06:0,39,376	0/0:21,0:21:60.08:0,60,574	0/0:17,0:17:42.06:0,42,406	0/0:29,0:29:51.08:0,51,492	0/0:23,0:23:42.06:0,42,406	0/0:15,0:15:42.07:0,42,406	0/0:28,0:28:66.10:0,66,637	0/0:16,0:16:26.99:0,27,251	1/1:2,10:12:30.09:362,30,0	1/1:4,21:25:60.18:723,60,0	0/0:24,0:24:57.09:0,57,550	0/0:23,0:23:57.08:0,57,546	0/0:8,0:8:21.03:0,21,203	0/0:32,0:32:75.01:0,75,705	0/0:18,0:18:45.07:0,45,434	0/0:16,0:16:42.07:0,42,405	1/1:2,21:24:66.19:782,66,0	0/0:4,0:4:12.02:0,12,116
chr10	82218391	.	CCA	C	1120.16	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=3.968;DP=360;FS=5.777;HRun=0;HaplotypeScore=56.3317;InbreedingCoeff=0.8055;MQ=85.79;MQ0=0;MQRankSum=-5.211;QD=17.78;ReadPosRankSum=3.675;VQSLOD=2.9676;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:67.58:0,68,776	0/0:8,0:8:12.01:0,12,127	0/0:20,0:19:14.27:0,14,434	0/0:14,0:12:29.90:0,30,353	0/0:7,0:7:11.94:0,12,111	0/0:14,0:14:21.45:0,21,218	0/0:13,0:13:38.97:0,39,595	1/1:6,13:19:41.70:441,42,0	0/0:14,0:14:12.47:0,12,140	0/0:14,0:14:33.04:0,33,380	0/0:7,0:7:5.98:0,6,57	0/0:15,0:15:35.40:0,35,406	0/0:13,0:13:17.92:0,18,203	0/0:19,0:19:23.96:0,24,257	0/0:17,0:17:5.98:0,6,82	0/0:8,0:8:17.26:0,17,209	0/0:18,0:18:32.98:0,33,371	0/0:13,0:13:3.67:0,4,78	1/1:6,10:16:32.97:336,33,0	1/1:2,7:9:18.05:199,18,0	0/0:15,0:15:23.85:0,24,232	0/0:8,0:8:11.75:0,12,118	0/0:7,0:7:8.99:0,9,103	0/0:19,0:19:26.98:0,27,241	0/1:6,0:6:0:0,0,0	0/0:5,0:5:9:0,9,104	1/1:4,9:13:27.07:299,27,0	./.
chr10	82219049	.	C	CAGA	8214.79	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-12.732;DP=756;FS=0.726;HRun=0;HaplotypeScore=104.4256;InbreedingCoeff=0.9998;MQ=84.98;MQ0=0;MQRankSum=-4.164;QD=49.19;ReadPosRankSum=-1.820;VQSLOD=6.1167;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,36:43:99:2067,99,0	0/0:16,0:16:45.15:0,45,704	0/0:32,0:32:87.29:0,87,1334	0/0:19,0:19:45.54:0,46,644	0/0:29,0:29:78.23:0,78,1174	0/0:27,0:27:75.24:0,75,1150	0/0:23,0:23:63.20:0,63,961	1/1:6,28:37:99:2044,99,0	0/0:29,0:29:84.25:0,84,1267	0/0:27,0:27:69.22:0,69,1042	0/0:15,0:15:42.14:0,42,654	0/0:19,0:19:54.18:0,54,845	0/0:21,0:21:63.20:0,63,964	0/0:34,0:34:84.25:0,84,1268	0/0:21,0:21:57.19:0,57,892	0/0:30,0:30:78.26:0,78,1201	0/0:42,0:42:99:0,114,1774	0/0:30,0:30:87.28:0,87,1338	1/1:6,21:29:69.22:1416,69,0	1/1:3,16:20:38.57:741,39,0	0/0:25,0:25:69.23:0,69,1080	0/0:24,0:24:66.22:0,66,1031	0/0:21,0:21:54.17:0,54,822	0/0:39,0:39:87.30:0,87,1358	0/0:14,0:14:39.13:0,39,610	0/0:38,0:38:99:0,102,1595	1/1:6,32:38:90.31:1947,90,0	0/0:14,0:14:30.10:0,30,469
chr10	82220280	.	TA	T	8618.84	PASS	AB=0.796;AC=50;AF=0.893;AN=56;BaseQRankSum=3.048;DP=662;FS=5.232;HRun=12;HaplotypeScore=81.4186;InbreedingCoeff=0.6774;MQ=72.52;MQ0=0;MQRankSum=-1.524;QD=14.20;ReadPosRankSum=5.212;VQSLOD=5.3826;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,2:39:66.89:0,67,827	1/1:0,7:7:17.93:139,18,0	0/1:17,0:16:2.27:2,0,149	0/0:16,0:14:15.01:0,15,143	0/1:9,19:29:34.22:336,0,34	1/1:2,17:21:45.87:337,46,0	1/1:8,19:28:12.43:412,12,0	1/1:5,0:30:49.96:145,50,0	1/1:3,20:23:32.37:373,32,0	1/1:4,26:31:69.05:576,69,0	1/1:2,16:19:43.60:320,44,0	1/1:5,27:32:77.69:604,78,0	1/1:6,24:30:38.28:481,38,0	1/1:4,15:19:8.39:245,8,0	1/1:2,18:20:38.85:302,39,0	1/1:3,26:30:67.62:517,68,0	1/1:7,18:26:52.82:401,53,0	1/1:5,19:24:29.86:368,30,0	1/1:5,0:19:28.62:84,29,0	1/1:1,0:25:45.51:136,46,0	1/1:4,28:32:74.67:579,75,0	1/1:3,13:16:35.79:275,36,0	1/1:2,19:21:41.62:325,42,0	1/1:5,32:37:80.68:627,81,0	1/1:2,15:18:49.84:377,50,0	1/1:6,17:24:49.79:375,50,0	1/1:1,1:20:37.55:123,38,0	1/1:2,7:9:20.88:162,21,0
chr10	82221872	.	C	CAAA	7389.68	PASS	AB=0.868;AC=51;AF=0.911;AN=56;BaseQRankSum=0.740;DP=558;FS=7.977;HRun=18;HaplotypeScore=167.0900;InbreedingCoeff=0.1459;MQ=79.88;MQ0=1;MQRankSum=-1.759;QD=13.92;ReadPosRankSum=-3.206;VQSLOD=0.9578;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:24.18:294,24,0	1/1:9,0:9:9.03:118,9,0	0/1:44,0:30:11.95:12,0,78	0/0:27,0:17:1.59:0,2,14	1/1:28,0:27:36.71:460,37,0	1/1:21,0:21:46.59:570,47,0	1/1:8,0:8:12.04:159,12,0	1/1:26,0:24:24.07:318,24,0	1/1:23,0:23:28.64:367,29,0	1/1:19,0:19:21.95:290,22,0	1/1:15,0:15:22.99:228,23,0	1/1:23,0:23:42.14:568,42,0	1/1:16,0:16:13.55:149,14,0	1/1:18,0:18:18.06:243,18,0	1/1:26,0:25:43.65:553,44,0	1/1:15,6:22:27.01:314,27,0	0/1:16,0:16:36.06:139,0,36	1/1:8,0:8:8.94:80,9,0	1/1:17,0:16:14.70:208,15,0	1/1:18,0:17:18.06:257,18,0	1/1:7,2:9:4.99:26,5,0	1/1:7,0:7:2.98:21,3,0	1/1:13,0:13:18.06:253,18,0	0/1:10,12:25:12.84:86,0,13	1/1:24,0:24:37.46:450,37,0	1/1:25,0:27:40.06:505,40,0	1/1:25,0:25:25.63:330,26,0	1/1:23,0:23:39.09:393,39,0
chr10	82225279	.	CATATATATAT	C	4215.56	PASS	AB=0.717;AC=47;AF=0.904;AN=52;BaseQRankSum=-2.035;DP=266;FS=0.928;HRun=0;HaplotypeScore=85.8496;InbreedingCoeff=0.1056;MQ=67.41;MQ0=4;MQRankSum=-3.212;QD=17.14;ReadPosRankSum=1.573;VQSLOD=3.3711;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:12:6.01:59,6,0	1/1:1,6:7:12.04:308,12,0	./.	0/1:23,0:12:9.94:10,0,53	1/1:4,12:16:11.95:295,12,0	1/1:1,13:15:23.97:576,24,0	1/1:4,5:9:9.03:251,9,0	0/1:13,0:32:99:252,0,152	1/1:1,1:2:3.01:72,3,0	1/1:1,3:4:9.03:175,9,0	1/1:4,5:11:12.04:325,12,0	1/1:2,6:8:9.03:256,9,0	1/1:1,0:5:3.01:30,3,0	1/1:2,0:2:2.98:21,3,0	1/1:0,3:3:9.03:254,9,0	1/1:3,3:6:3.01:70,3,0	1/1:3,9:11:3.01:38,3,0	1/1:1,6:7:3.01:93,3,0	1/1:3,0:10:21.67:189,22,0	1/1:6,0:14:3.01:30,3,0	1/1:3,3:6:3.01:93,3,0	./.	1/1:1,1:2:3.01:93,3,0	1/1:0,3:3:3.01:68,3,0	1/1:3,11:14:15.05:446,15,0	0/0:3,0:9:18.01:0,18,198	1/1:2,1:11:18.04:209,18,0	0/1:2,0:9:6.20:6,0,238
chr10	82230895	.	CCG	C	2283.34	PASS	AB=0.972;AC=33;AF=0.611;AN=54;BaseQRankSum=-5.485;DP=334;FS=74.871;HRun=0;HaplotypeScore=68.5948;InbreedingCoeff=-0.0279;MQ=78.65;MQ0=2;MQRankSum=-0.289;QD=8.49;ReadPosRankSum=0.552;VQSLOD=0.4735;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:10:2.23:88,0,2	1/1:9,0:9:21.27:122,21,0	0/0:24,0:18:9.46:0,9,498	0/0:26,0:19:11.39:0,11,291	1/1:12,1:13:13.43:102,13,0	1/1:5,1:6:11.99:125,12,0	1/1:2,25:27:62.64:879,63,0	0/1:12,1:12:6.75:68,0,7	1/1:13,0:13:11.72:76,12,0	0/1:10,0:10:0.13:66,0,0	1/1:10,0:10:10.01:45,10,0	0/1:11,0:11:31.87:32,0,34	0/1:16,1:17:9.32:119,0,9	0/1:9,1:9:4.11:68,0,4	0/1:11,1:12:14.38:83,0,14	0/1:13,1:14:11.64:95,0,12	1/1:23,0:23:14.97:52,15,0	0/1:14,0:14:4.65:125,0,5	0/1:6,0:6:15.55:16,0,33	0/0:5,0:5:2.66:0,3,19	1/1:6,0:6:11.73:59,12,0	0/1:8,0:8:15.18:15,0,18	1/1:6,0:6:2.97:9,3,0	0/1:11,0:11:14.92:44,0,15	1/1:9,0:9:12.93:101,13,0	0/1:11,0:11:53.69:54,0,54	0/0:7,0:7:2.43:0,2,26	./.
chr10	82230896	.	CG	C	5034.81	PASS	AB=0.962;AC=49;AF=0.907;AN=54;BaseQRankSum=-3.472;DP=335;FS=11.907;HRun=1;HaplotypeScore=56.7576;InbreedingCoeff=0.4772;MQ=76.19;MQ0=2;MQRankSum=-3.501;QD=16.62;ReadPosRankSum=-1.280;VQSLOD=3.3779;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:15.72:137,16,0	1/1:8,2:10:28.30:307,28,0	0/0:23,0:18:21.44:0,21,396	0/1:24,1:18:8.80:9,0,192	1/1:11,2:13:20.98:236,21,0	1/1:5,2:7:17.93:156,18,0	1/1:25,2:27:62.13:417,62,0	1/1:11,1:11:6.52:83,7,0	1/1:12,1:13:35.42:335,35,0	1/1:9,1:10:15.77:188,16,0	1/1:0,10:10:14.83:163,15,0	1/1:10,1:11:21.11:167,21,0	1/1:13,3:16:31.95:328,32,0	1/1:6,4:9:24.57:259,25,0	1/1:8,3:11:24.57:271,25,0	1/1:12,3:15:35.13:348,35,0	1/1:0,23:23:18.05:251,18,0	1/1:13,1:14:36.19:335,36,0	1/1:6,0:6:3.53:46,4,0	0/0:5,0:5:2.04:0,2,6	1/1:5,1:6:18.03:217,18,0	1/1:2,5:7:0.87:114,1,0	1/1:0,6:6:3.48:43,3,0	1/1:9,2:11:25.74:273,26,0	1/1:7,2:9:20.88:177,21,0	1/1:11,0:11:7.10:74,7,0	1/1:7,2:9:14.44:98,14,0	./.
chr10	82232489	.	G	GACACACACACACACACAC	8923.18	PASS	AB=1.000;AC=44;AF=0.846;AN=52;BaseQRankSum=-5.633;DP=555;FS=2.360;HRun=0;HaplotypeScore=240.8287;InbreedingCoeff=0.4705;MQ=52.18;MQ0=7;MQRankSum=1.717;QD=19.87;ReadPosRankSum=-2.398;VQSLOD=3.5441;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,5:33:3.01:252,3,0	1/1:6,0:6:3.01:42,3,0	0/0:37,0:19:5.92:0,6,45	./.	0/1:10,0:9:0:0,0,0	1/1:20,0:20:15.03:316,15,0	1/1:23,0:30:3.01:65,3,0	1/1:28,0:27:48.14:1233,48,0	1/1:15,0:14:9.01:200,9,0	1/1:22,0:20:24.05:997,24,0	1/1:17,0:17:6.02:271,6,0	1/1:27,0:24:15.85:270,16,0	1/1:22,0:22:24.01:967,24,0	1/1:8,0:14:3.01:155,3,0	1/1:22,0:21:12.04:257,12,0	1/1:24,0:24:27.06:952,27,0	1/1:20,0:20:12.49:272,12,0	1/1:11,0:11:6.02:306,6,0	1/1:19,0:19:18.81:545,19,0	1/1:7,0:7:3.01:48,3,0	1/1:20,0:20:2.32:23,2,0	1/1:22,0:21:12.02:224,12,0	./.	1/1:24,0:24:11.68:348,12,0	0/1:17,0:15:5.48:210,0,5	0/0:12,0:20:27.08:0,27,947	1/1:19,0:18:26.55:970,27,0	0/0:5,0:10:6.64:0,7,141
chr10	82234285	.	GTT	G	2329.87	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=4.508;DP=378;FS=10.014;HRun=11;HaplotypeScore=53.0276;InbreedingCoeff=0.8963;MQ=69.48;MQ0=3;MQRankSum=-0.398;QD=20.44;ReadPosRankSum=0.937;VQSLOD=1.6678;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,1:24:6.43:0,6,103	0/0:4,0:4:9.03:0,9,139	0/0:4,0:2:2.68:0,3,11	0/0:12,0:10:8.93:0,9,111	0/0:17,0:17:48.06:0,48,688	0/0:11,0:14:10.27:0,10,495	0/0:1,0:9:14.97:0,15,51	1/1:5,22:26:62.99:634,63,0	0/0:12,0:12:30.10:0,30,462	0/0:14,0:14:30.10:0,30,462	0/0:14,0:14:33.10:0,33,489	0/0:10,0:10:27.09:0,27,414	1/1:2,13:15:27:343,27,0	1/1:2,7:9:18.03:191,18,0	0/0:9,0:9:24.07:0,24,350	0/0:4,0:4:12.04:0,12,185	0/0:22,0:21:45.14:0,45,673	0/0:17,0:19:44.11:0,44,591	1/1:3,6:8:18.04:191,18,0	1/1:6,15:21:42.07:447,42,0	0/0:9,0:10:17.97:0,18,207	1/1:1,12:14:32.94:335,33,0	0/0:15,0:15:42.14:0,42,645	0/0:9,0:9:18.06:0,18,274	0/0:14,0:15:41.63:0,42,608	0/0:4,1:17:9.38:0,9,127	1/1:4,14:18:35.96:383,36,0	0/0:3,0:8:12.48:0,12,43
chr10	82234851	.	T	TGGG	309.40	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=-2.618;DP=661;FS=1.634;HRun=4;HaplotypeScore=76.9295;InbreedingCoeff=0.6324;MQ=35.42;MQ0=121;MQRankSum=-3.098;QD=22.10;ReadPosRankSum=-0.280;VQSLOD=0.0902;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:24:21.05:0,21,299	0/0:7,0:4:9.03:0,9,138	./.	./.	0/0:20,0:12:8.90:0,9,138	0/0:19,0:18:21.06:0,21,301	1/1:4,10:10:18.06:399,18,0	0/0:24,0:11:24.06:0,24,345	0/0:24,0:24:38.96:0,39,563	0/0:26,0:15:45.14:0,45,651	0/0:13,0:8:3.01:0,3,37	0/0:32,0:31:47.51:0,48,691	0/0:25,0:21:47.96:0,48,735	0/0:29,0:29:60.20:0,60,919	0/0:37,0:32:42.13:0,42,622	0/0:31,0:31:51.16:0,51,757	0/0:37,0:20:36.12:0,36,552	0/0:29,0:18:15.01:0,15,204	0/0:19,0:13:36.12:0,36,552	0/0:30,0:22:48.12:0,48,708	0/0:40,0:17:21.05:0,21,322	0/0:21,0:11:15.04:0,15,209	0/0:24,0:14:18.04:0,18,253	0/0:23,0:15:15.05:0,15,230	0/0:30,0:25:30.10:0,30,460	0/0:28,0:22:66.19:0,66,968	0/0:30,0:28:63.21:0,63,960	0/0:19,0:6:3.01:0,3,46
chr10	82236850	.	G	GA	4671.69	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-12.144;DP=652;FS=1.132;HRun=8;HaplotypeScore=62.1596;InbreedingCoeff=0.9579;MQ=78.63;MQ0=1;MQRankSum=-1.218;QD=27.16;ReadPosRankSum=-1.417;VQSLOD=5.0077;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,114,1028	0/0:10,0:10:24.01:0,24,220	0/0:13,0:11:20.97:0,21,184	0/0:17,0:17:0.44:0,0,154	0/0:23,0:23:69.04:0,69,631	0/0:20,0:20:48.01:0,48,435	1/1:2,23:25:57.17:658,57,0	1/1:5,17:23:26.48:509,26,0	0/0:18,0:18:50.99:0,51,459	0/0:30,0:30:84.02:0,84,760	0/0:18,0:18:51.03:0,51,466	0/0:33,0:33:93.03:0,93,843	1/1:3,16:19:39.12:450,39,0	1/1:1,18:19:48.14:554,48,0	0/0:33,0:32:86.99:0,87,784	0/0:31,1:32:49.38:0,49,695	0/0:36,0:36:99:0,99,906	0/0:23,0:23:66.02:0,66,598	1/1:2,21:23:63.16:702,63,0	1/1:1,17:18:51.15:588,51,0	0/0:28,0:28:74.91:0,75,659	1/1:1,16:17:42.12:485,42,0	0/0:20,0:20:54.03:0,54,494	0/0:26,0:26:71.96:0,72,645	0/0:19,0:19:50.99:0,51,457	0/0:25,0:25:72.02:0,72,654	1/1:2,26:28:63.19:727,63,0	0/0:14,0:14:39.02:0,39,357
chr10	82238510	.	G	GCACACA	5028.76	PASS	AB=0.731;AC=47;AF=0.940;AN=50;BaseQRankSum=-2.999;DP=553;FS=0.000;HRun=0;HaplotypeScore=155.1578;InbreedingCoeff=-0.1671;MQ=62.74;MQ0=14;MQRankSum=-2.911;QD=10.24;ReadPosRankSum=-0.220;VQSLOD=3.2836;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:34:2.55:330,3,0	./.	./.	./.	1/1:20,0:20:3.01:31,3,0	1/1:28,0:27:4.38:64,4,0	0/1:12,0:21:59.70:99,0,60	1/1:28,0:27:19.94:274,20,0	1/1:10,0:9:6:73,6,0	1/1:18,0:18:21.07:473,21,0	1/1:13,3:16:3.01:95,3,0	1/1:16,0:15:3.48:96,3,0	1/1:11,3:15:15.05:382,15,0	1/1:10,0:14:11.56:258,12,0	1/1:22,5:28:8.92:272,9,0	1/1:12,3:20:11.93:368,12,0	1/1:15,0:22:5.17:155,5,0	1/1:16,1:29:23.21:571,23,0	0/1:9,1:12:33.13:181,0,33	1/1:13,5:19:8.98:230,9,0	1/1:22,0:20:8.99:110,9,0	1/1:10,2:16:2.66:78,3,0	1/1:13,0:13:2.35:23,2,0	1/1:12,0:24:1.62:75,2,0	1/1:4,0:10:2.14:37,2,0	0/1:10,0:17:37.14:286,0,37	1/1:15,6:23:12.04:318,12,0	1/1:1,0:11:10.31:150,10,0
chr10	82238906	.	CA	C	1118.50	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.270;DP=532;FS=1.176;HRun=9;HaplotypeScore=55.0653;InbreedingCoeff=0.9720;MQ=74.19;MQ0=1;MQRankSum=-1.330;QD=23.30;ReadPosRankSum=0.549;VQSLOD=4.4306;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:88.86:801,89,0	0/0:9,0:9:24.07:0,24,277	0/0:13,0:13:24.07:0,24,249	0/0:22,0:18:31.62:0,32,320	0/0:20,0:21:60:0,60,662	0/0:13,0:13:39.12:0,39,450	1/1:0,18:18:48.03:439,48,0	0/0:28,0:28:72.19:0,72,813	0/0:11,0:11:30.09:0,30,346	0/0:25,0:25:66.20:0,66,762	0/0:23,0:23:60.12:0,60,665	0/0:13,1:14:11.65:0,12,388	0/0:12,0:12:32.93:0,33,361	0/0:19,0:19:51.15:0,51,589	0/0:18,0:18:51.14:0,51,580	0/0:12,0:12:30.07:0,30,328	0/0:29,0:29:84.24:0,84,959	0/0:18,0:19:50.98:0,51,568	0/0:20,0:20:48.13:0,48,544	0/0:15,0:15:30.09:0,30,346	0/0:5,0:5:15.04:0,15,173	0/0:19,0:19:51.15:0,51,589	0/0:13,0:13:39.11:0,39,442	0/0:17,0:17:51.15:0,51,589	0/0:32,0:32:90.27:0,90,1039	0/0:25,0:25:63.18:0,63,719	0/0:22,0:22:60.15:0,60,678	0/0:27,0:27:81.24:0,81,934
chr10	82239555	.	CA	C	5253.19	PASS	AB=0.568;AC=31;AF=0.554;AN=56;BaseQRankSum=-11.182;DP=509;FS=0.390;HRun=12;HaplotypeScore=70.2656;InbreedingCoeff=0.8970;MQ=75.65;MQ0=0;MQRankSum=-3.970;QD=17.28;ReadPosRankSum=6.021;VQSLOD=5.4360;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,30:39:56.17:620,56,0	1/1:0,4:4:8.96:70,9,0	0/0:16,0:16:13.39:0,13,157	0/0:11,0:10:13.17:0,13,100	1/1:3,16:20:43.11:330,43,0	1/1:0,16:16:38.85:302,39,0	0/0:11,0:11:24.02:0,24,231	0/0:6,0:27:61.57:0,62,347	1/1:3,15:19:25.85:330,26,0	1/1:5,12:18:37.85:284,38,0	1/1:1,18:20:52.83:401,53,0	0/1:5,16:21:13.24:237,0,13	0/0:3,0:16:22.84:0,23,119	0/0:7,0:21:40.08:0,40,211	1/1:1,18:20:52.84:401,53,0	1/1:0,11:11:26.90:209,27,0	1/1:5,21:27:61.78:470,62,0	1/1:2,19:22:55.83:424,56,0	0/0:7,0:21:45.76:0,46,242	0/0:2,0:21:52.67:0,53,287	1/1:3,15:18:38.84:302,39,0	0/0:4,0:12:28.73:0,29,171	1/1:0,15:15:41.84:325,42,0	1/1:4,12:16:32.87:255,33,0	1/1:2,16:18:14.35:295,14,0	0/0:8,1:27:34.49:0,34,305	0/0:5,0:18:31.25:0,31,158	0/0:1,0:3:5.68:0,6,29
chr10	82242485	.	CACATACTTGGGGACCTGGG	C	2246.27	PASS	AB=0.588;AC=3;AF=0.054;AN=56;BaseQRankSum=7.037;DP=720;FS=6.161;HRun=0;HaplotypeScore=348.5110;InbreedingCoeff=0.6200;MQ=87.86;MQ0=0;MQRankSum=-3.476;QD=93.59;ReadPosRankSum=-0.780;VQSLOD=2.4608;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,135,11313	0/0:14,0:14:42.14:0,42,3582	0/0:26,0:26:63.22:0,63,3393	0/0:24,0:25:75.26:0,75,4788	0/0:26,0:26:75.26:0,75,6217	0/0:20,0:20:51.18:0,51,4210	0/0:27,0:27:66.23:0,66,5375	0/0:22,0:22:66.23:0,66,4518	0/0:24,0:24:69.24:0,69,5712	0/0:25,0:25:66.21:0,66,4541	0/0:15,0:15:45.15:0,45,3825	0/0:26,0:26:75.24:0,75,5870	0/0:32,0:32:90.31:0,90,7834	0/0:29,0:29:81.28:0,81,6865	0/0:35,0:35:99:0,99,7882	0/0:22,0:22:63.22:0,63,5558	0/0:44,0:44:99:0,129,10766	0/0:26,0:26:78.27:0,78,6619	0/0:25,0:25:69.24:0,69,4658	0/0:21,0:21:60.21:0,60,4756	0/0:36,0:36:99:0,105,7602	0/0:19,0:19:54.19:0,54,4390	0/0:23,0:23:66.23:0,66,5461	0/0:32,0:32:93.32:0,93,7921	0/0:26,0:26:75.26:0,75,5895	0/1:6,14:20:99:1706,0,229	0/0:24,0:24:72.23:0,72,5639	1/1:0,4:4:12.04:640,12,0
chr10	82243088	.	C	CTG	2578.46	PASS	AB=0.694;AC=7;AF=0.125;AN=56;BaseQRankSum=2.022;DP=1006;FS=0.000;HRun=0;HaplotypeScore=178.1216;InbreedingCoeff=0.7566;MQ=61.49;MQ0=14;MQRankSum=-1.009;QD=18.68;ReadPosRankSum=-1.281;VQSLOD=3.0352;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:11.80:0,12,45	0/0:13,0:16:35.60:0,36,366	0/0:57,0:29:24.82:0,25,259	0/0:60,0:33:48.71:0,49,522	0/0:28,1:30:3.18:0,3,517	0/0:21,0:22:47.96:0,48,541	1/1:13,2:23:36.43:349,36,0	0/0:26,1:28:5.99:0,6,530	0/0:34,0:34:63.18:0,63,741	0/0:49,0:47:77.16:0,77,1044	0/0:22,0:22:39.09:0,39,445	0/0:35,0:35:74.60:0,75,779	0/1:19,15:32:57.43:688,0,57	1/1:22,23:43:72.21:1079,72,0	0/0:51,0:55:99:0,117,1333	0/0:27,0:27:47.71:0,48,529	0/0:52,0:50:99:0,129,1505	0/0:34,0:35:75.03:0,75,860	0/0:29,0:30:47.93:0,48,515	0/0:28,0:28:63.07:0,63,707	0/0:65,0:65:99:0,129,1441	1/1:17,18:33:39.13:610,39,0	0/0:28,0:28:54.15:0,54,632	0/0:59,0:59:99:0,100,1349	0/0:17,0:17:39.08:0,39,428	0/0:44,0:41:67.95:0,68,873	0/0:24,0:25:44.97:0,45,517	0/0:14,0:14:21.95:0,22,316
chr10	82243106	.	GTC	G	161.59	PASS	AB=0.881;AC=2;AF=0.036;AN=56;BaseQRankSum=5.231;DP=1056;FS=0.000;HRun=0;HaplotypeScore=183.9410;InbreedingCoeff=0.3465;MQ=54.88;MQ0=30;MQRankSum=1.570;QD=3.37;ReadPosRankSum=0.289;VQSLOD=2.6969;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,10:32:0.71:235,0,1	0/1:16,0:15:5.74:6,0,500	0/0:46,0:13:27.42:0,27,345	0/0:71,1:23:25.77:0,26,735	0/0:36,0:34:72.13:0,72,1106	0/0:25,0:25:54.20:0,54,972	0/0:26,0:26:6.93:0,7,411	0/0:38,0:32:81.12:0,81,1249	0/0:35,0:35:93.13:0,93,1408	0/0:43,0:41:99:0,111,1865	0/0:25,0:25:56.97:0,57,886	0/0:34,0:34:84.69:0,85,1453	0/0:41,1:40:60.84:0,61,990	0/0:46,0:42:59.26:0,59,780	0/0:60,0:60:99:0,110,2275	0/0:31,0:30:69.11:0,69,1060	0/0:56,0:54:99:0,122,2428	0/0:29,0:29:67.51:0,68,1322	0/0:25,0:24:56.21:0,56,965	0/0:29,0:29:80.93:0,81,1241	0/0:72,0:69:99:0,114,2368	0/0:31,0:29:15.46:0,15,309	0/0:28,0:27:69.18:0,69,1159	0/0:75,0:75:99:0,179,2751	0/0:21,0:20:47.65:0,48,681	0/0:42,0:39:99:0,113,1703	0/0:25,0:25:44.94:0,45,878	0/0:16,0:15:34.53:0,35,571
chr10	82243131	.	AGT	A	5424.39	PASS	AB=0.909;AC=17;AF=0.304;AN=56;BaseQRankSum=6.885;DP=1016;FS=1.465;HRun=0;HaplotypeScore=177.9670;InbreedingCoeff=0.8982;MQ=50.07;MQ0=45;MQRankSum=0.186;QD=20.24;ReadPosRankSum=-0.776;VQSLOD=5.0982;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:30.06:0,30,462	0/1:9,1:9:19.45:19,0,151	0/0:37,0:5:11.57:0,12,120	0/0:70,0:12:23.90:0,24,266	0/0:35,0:31:63.15:0,63,931	0/0:31,0:30:69.19:0,69,1054	1/1:7,23:30:63.16:767,63,0	1/1:18,25:34:62.57:678,63,0	0/0:35,0:35:78.15:0,78,1147	0/0:39,0:39:77.25:0,77,1131	0/0:24,0:24:57.15:0,57,837	0/0:41,0:41:93.20:0,93,1365	1/1:18,24:41:99:1258,105,0	1/1:14,25:37:65.95:760,66,0	0/0:58,0:58:99:0,125,1704	0/0:29,0:27:74.96:0,75,1122	0/0:41,2:43:20.50:0,21,1245	0/0:27,0:27:41.72:0,42,935	1/1:16,15:22:43.97:510,44,0	1/1:17,9:25:57.13:661,57,0	0/0:62,0:64:99:0,132,1929	1/1:14,8:21:30.10:374,30,0	0/0:24,0:24:57.17:0,57,874	0/0:65,0:71:99:0,153,2250	0/0:24,0:23:41.87:0,42,670	0/0:47,0:44:49.42:0,49,489	1/1:5,19:23:33.09:397,33,0	0/0:9,0:9:7.71:0,8,31
chr10	82243153	.	AGT	A	1180.19	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.031;DP=981;FS=6.809;HRun=0;HaplotypeScore=216.4744;InbreedingCoeff=0.9552;MQ=50.57;MQ0=26;MQRankSum=-2.884;QD=28.10;ReadPosRankSum=0.602;VQSLOD=3.9970;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:48.05:0,48,689	0/0:6,0:6:12.47:0,12,145	0/0:36,0:14:33.07:0,33,435	0/0:55,0:18:11.54:0,12,293	0/0:29,0:28:65.35:0,65,914	0/0:29,0:26:69.22:0,69,1102	0/0:38,0:37:81.27:0,81,595	0/0:39,0:34:34.20:0,34,649	0/0:39,0:38:73.70:0,74,1099	0/0:34,0:33:95.55:0,96,1309	0/0:26,0:26:65.51:0,66,964	0/0:39,0:38:87.15:0,87,1375	0/0:46,0:45:42.78:0,43,411	0/0:47,1:45:35.70:0,36,526	0/0:53,0:52:99:0,114,1693	0/0:34,1:34:48.68:0,49,1226	0/0:39,0:37:87.49:0,87,1252	0/0:23,0:23:62.65:0,63,934	0/0:28,0:21:48.97:0,49,385	0/0:22,0:21:18.46:0,18,240	0/0:76,0:74:99:0,107,2158	0/0:22,0:20:36.38:0,36,263	0/0:27,0:26:72.18:0,72,1074	0/0:68,0:66:99:0,137,2107	0/0:21,0:21:40.68:0,41,656	1/1:14,23:35:46.93:1106,47,0	0/0:20,0:19:22.62:0,23,130	1/1:0,5:5:15.05:192,15,0
chr10	82243195	.	TGTGTGTGTGA	T	1454.52	PASS	AB=0.737;AC=3;AF=0.054;AN=56;BaseQRankSum=0.424;DP=1077;FS=0.000;HRun=0;HaplotypeScore=408.6924;InbreedingCoeff=0.6394;MQ=50.60;MQ0=31;MQRankSum=-4.995;QD=42.78;ReadPosRankSum=-2.670;VQSLOD=2.2328;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:50.41:0,50,1512	0/0:12,0:12:23.89:0,24,824	0/0:64,0:16:32.42:0,32,615	0/0:68,0:20:42.88:0,43,952	0/0:28,0:27:54.16:0,54,1527	0/0:26,0:23:47.78:0,48,1102	0/0:41,0:39:80.62:0,81,1985	0/0:45,0:43:93.32:0,93,2982	0/0:44,0:43:53.07:0,53,2120	0/0:59,0:56:99:0,155,4123	0/0:25,0:25:38.99:0,39,1107	0/0:44,0:42:90.57:0,91,2610	0/0:48,0:47:99:0,113,3873	0/0:43,0:41:74.95:0,75,3349	0/0:54,0:52:87.89:0,88,2702	0/0:45,0:43:87.08:0,87,2519	0/0:26,0:24:39.84:0,40,1577	0/0:23,0:23:65.64:0,66,1672	0/0:31,0:30:62.54:0,63,2014	0/0:30,0:29:78.25:0,78,3242	0/0:73,0:72:99:0,150,4076	0/0:38,0:35:87.28:0,87,3493	0/0:36,0:35:74.64:0,75,2258	0/0:53,0:51:80.50:0,81,2503	0/0:28,0:28:51.03:0,51,1355	0/1:18,10:27:62.86:1231,0,63	0/0:23,0:21:45.10:0,45,1629	1/1:4,2:6:18.06:327,18,0
chr10	82243205	.	A	AGT	18062.19	PASS	AB=0.984;AC=36;AF=0.643;AN=56;BaseQRankSum=-5.733;DP=1128;FS=4.616;HRun=0;HaplotypeScore=255.3791;InbreedingCoeff=0.8696;MQ=49.22;MQ0=38;MQRankSum=5.091;QD=25.16;ReadPosRankSum=1.874;VQSLOD=5.1090;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,18:35:38.88:627,39,0	1/1:3,8:11:24.07:360,24,0	0/0:64,0:13:11.98:0,12,207	0/0:78,0:21:18.75:0,19,295	1/1:18,16:32:60.19:913,60,0	1/1:17,10:24:57.13:797,57,0	1/1:23,22:41:46.16:1267,46,0	0/0:40,0:36:75.04:0,75,889	1/1:17,26:42:62.90:950,63,0	1/1:35,31:62:99:2347,159,0	1/1:11,14:25:35.49:535,35,0	1/1:27,22:47:96.11:1525,96,0	0/0:48,0:47:99:0,111,1281	0/0:50,0:49:84.22:0,84,1016	1/1:23,31:52:46.33:1198,46,0	1/1:13,28:39:72.54:1275,73,0	1/1:15,14:26:47.13:755,47,0	1/1:14,12:26:57.14:893,57,0	0/0:29,0:26:43.52:0,44,591	0/0:31,0:30:77.81:0,78,921	1/1:44,38:79:99:2042,106,0	0/0:43,0:39:82.39:0,82,989	1/1:14,21:34:22.06:836,22,0	1/1:24,25:47:62.94:1006,63,0	1/1:14,14:27:38.82:568,39,0	0/1:30,1:29:50.73:149,0,51	0/0:26,0:23:44.95:0,45,569	0/1:7,0:7:1.44:17,0,1
chr10	82243237	.	TGTGA	T	612.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.082;DP=1081;FS=15.964;HRun=0;HaplotypeScore=338.9690;InbreedingCoeff=0.7753;MQ=46.43;MQ0=29;MQRankSum=0.974;QD=17.51;ReadPosRankSum=-5.155;VQSLOD=1.6992;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:17,18:35:46.36:708,46,0	0/0:17,0:17:35.60:0,36,309	0/0:42,0:9:17.24:0,17,378	0/0:64,0:10:12.01:0,12,233	0/0:28,0:26:56.59:0,57,367	0/0:26,0:24:26.07:0,26,242	0/0:47,0:42:90.28:0,90,612	0/0:46,0:31:71.49:0,71,666	0/0:40,0:40:67.55:0,68,549	0/0:57,0:54:99:0,120,958	0/0:23,0:23:20.76:0,21,191	0/0:52,0:50:80.94:0,81,609	0/0:47,0:45:99:0,109,732	0/0:56,0:51:71.19:0,71,555	0/0:54,0:53:92.67:0,93,720	0/0:38,0:36:70.45:0,70,514	0/0:27,0:23:9.84:0,10,296	0/0:18,0:18:6.44:0,6,298	0/0:37,0:25:57.51:0,58,465	0/0:36,0:36:80.10:0,80,542	0/0:85,1:77:99:0,124,898	0/0:43,0:39:65.83:0,66,519	0/0:23,0:23:25.02:0,25,226	0/0:49,0:49:69.51:0,70,460	0/0:24,0:22:24.03:0,24,252	0/0:34,0:32:96.06:0,96,1979	0/0:21,0:20:7.10:0,7,252	0/0:10,0:10:21.07:0,21,515
chr10	82243241	.	AGT	A	17785.44	PASS	AB=0.768;AC=45;AF=0.804;AN=56;BaseQRankSum=0.269;DP=1072;FS=0.000;HRun=0;HaplotypeScore=253.4269;InbreedingCoeff=0.6552;MQ=46.71;MQ0=24;MQRankSum=7.464;QD=19.27;ReadPosRankSum=3.596;VQSLOD=4.4498;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:23.29:92,23,0	1/1:7,10:17:23.54:283,24,0	0/0:39,0:8:17.89:0,18,258	0/0:63,0:11:18.02:0,18,231	1/1:6,24:28:51.14:648,51,0	1/1:6,18:22:39.07:485,39,0	1/1:19,26:40:80.95:1009,81,0	0/1:41,4:32:99:397,0,129	1/1:16,23:39:78.08:909,78,0	1/1:30,26:54:99:1611,132,0	1/1:10,11:21:30.08:376,30,0	1/1:12,37:47:83.85:1016,84,0	1/1:27,24:49:75.82:1182,76,0	1/1:35,25:54:82.75:992,83,0	1/1:22,30:51:89.73:1163,90,0	1/1:16,20:34:57.03:672,57,0	1/1:12,16:24:60.11:725,60,0	0/1:9,7:16:22.78:265,0,23	0/1:21,17:25:41.26:473,0,41	1/1:16,19:35:69.67:883,70,0	1/1:48,38:79:99:1513,126,0	1/1:25,18:39:84.17:1041,84,0	1/1:11,11:22:30.09:385,30,0	1/1:23,27:50:69.12:796,69,0	1/1:11,14:23:35.91:379,36,0	0/0:37,0:35:98.66:0,99,1506	1/1:11,8:18:41.33:489,41,0	0/0:10,0:10:24.04:0,24,369
chr10	82243251	.	TGA	T	5109.99	PASS	AB=0.986;AC=34;AF=0.607;AN=56;BaseQRankSum=4.789;DP=1049;FS=0.359;HRun=0;HaplotypeScore=286.5007;InbreedingCoeff=0.0399;MQ=47.74;MQ0=25;MQRankSum=6.440;QD=5.87;ReadPosRankSum=11.490;VQSLOD=2.5120;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:31:27.88:0,28,151	0/1:15,0:15:27.69:70,0,28	0/0:39,0:7:6.80:0,7,200	0/0:56,0:14:14.01:0,14,242	1/1:28,0:27:11.55:185,12,0	0/1:25,0:25:23.69:134,0,24	0/1:45,0:40:22.03:262,0,22	0/1:45,0:34:76.33:76,0,276	1/1:38,0:37:18.44:278,18,0	1/1:47,0:48:48.45:409,48,0	1/1:21,0:21:4.38:104,4,0	0/1:54,0:52:28.57:275,0,29	1/1:48,0:45:56.29:470,56,0	1/1:55,0:48:49.34:338,49,0	1/1:50,1:49:44.94:347,45,0	0/1:34,0:32:13.50:165,0,13	1/1:27,0:23:48.73:258,49,0	0/1:16,0:17:55.86:83,0,56	0/1:34,0:23:80.73:126,0,81	1/1:35,0:35:0.38:256,0,0	0/1:89,2:83:53.76:373,0,54	1/1:38,0:35:49.27:332,49,0	1/1:19,0:19:6.96:118,7,0	0/1:52,1:53:15.80:201,0,16	0/1:26,0:24:16.47:72,0,16	0/0:39,0:36:99:0,99,1612	0/1:21,0:19:6.54:178,0,7	0/0:9,0:9:27.04:0,27,419
chr10	82243317	.	A	AGT	19287.93	PASS	AB=0.802;AC=50;AF=0.926;AN=54;BaseQRankSum=-6.459;DP=1109;FS=12.349;HRun=0;HaplotypeScore=261.9847;InbreedingCoeff=0.0401;MQ=43.75;MQ0=36;MQRankSum=6.019;QD=17.94;ReadPosRankSum=4.854;VQSLOD=3.1832;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,15:34:26.70:439,27,0	1/1:10,5:15:14.65:219,15,0	./.	0/1:41,0:6:0:0,0,0	1/1:16,19:35:39.11:616,39,0	0/1:12,14:23:14.15:322,0,14	1/1:29,21:44:6.62:1027,7,0	0/1:34,7:31:31.11:519,0,31	1/1:24,19:41:52.52:810,53,0	1/1:30,26:54:99:1515,102,0	1/1:18,14:31:51.01:790,51,0	1/1:26,38:60:93.92:1588,94,0	1/1:22,21:40:65.81:1100,66,0	1/1:28,22:44:53.03:813,53,0	1/1:33,26:51:69.20:1063,69,0	1/1:16,17:29:7.63:624,8,0	1/1:12,12:20:18.36:614,18,0	0/1:7,8:18:15.07:354,0,15	1/1:17,5:15:8.16:192,8,0	1/1:11,13:23:16.66:364,17,0	1/1:69,49:115:15.96:1758,16,0	1/1:21,16:34:1.50:511,1,0	1/1:9,15:24:41.88:644,42,0	1/1:26,27:56:66.14:1077,66,0	1/1:12,9:20:21.07:346,21,0	1/1:35,18:45:30.93:1129,31,0	1/1:7,15:19:41.80:677,42,0	1/1:10,4:12:12.03:176,12,0
chr10	82243329	.	TGA	T	302.01	PASS	AB=0.982;AC=13;AF=0.232;AN=56;BaseQRankSum=-3.030;DP=1118;FS=2.584;HRun=0;HaplotypeScore=321.9779;InbreedingCoeff=-0.1740;MQ=41.31;MQ0=50;MQRankSum=0.526;QD=0.63;ReadPosRankSum=-10.296;VQSLOD=-0.2768;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:33,2:29:16.85:17,0,169	0/1:13,0:13:7.05:7,0,98	1/1:39,0:2:2.92:17,3,0	0/1:58,0:6:18.67:19,0,88	0/0:36,0:35:23.08:0,23,418	0/0:25,1:23:26.72:0,27,282	0/1:53,0:43:79.75:80,0,481	0/0:34,0:19:5.88:0,6,247	0/0:39,1:39:24.43:0,24,442	0/1:50,2:50:57.62:58,0,711	0/1:30,0:29:51.80:52,0,228	0/0:62,1:59:68.62:0,69,1064	0/0:43,1:40:5.25:0,5,534	0/1:51,2:50:14.25:14,0,264	0/0:53,0:46:10.69:0,11,594	0/0:32,0:29:31.05:0,31,429	0/0:23,1:21:3.09:0,3,391	0/0:19,0:18:16.76:0,17,226	0/0:22,0:12:18.29:0,18,160	0/1:23,0:21:29.86:30,0,153	0/0:124,10:119:49.19:0,49,1324	0/1:36,0:33:54.97:55,0,229	0/1:24,2:26:2.72:3,0,354	0/0:54,2:56:17.20:0,17,610	0/0:18,1:18:10.41:0,10,155	0/1:57,0:49:97.29:97,0,627	0/0:22,0:20:32.87:0,33,386	0/0:15,0:13:16.80:0,17,160
chr10	82243349	.	AGTCT	A	1264.93	PASS	AB=0.914;AC=16;AF=0.286;AN=56;BaseQRankSum=1.158;DP=1051;FS=1.526;HRun=0;HaplotypeScore=307.9453;InbreedingCoeff=-0.2392;MQ=37.37;MQ0=51;MQRankSum=-3.980;QD=2.61;ReadPosRankSum=-4.271;VQSLOD=1.1216;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,5:25:21.48:157,21,0	0/0:10,0:10:6.99:0,7,54	0/0:60,0:4:9.03:0,9,157	0/0:83,0:11:0.90:0,1,393	0/0:31,0:30:35.97:0,36,479	0/0:22,0:20:13.80:0,14,239	0/1:38,8:36:25.79:26,0,265	0/1:27,1:15:47.98:48,0,249	0/1:43,0:42:29.69:30,0,631	0/1:40,0:37:53.41:53,0,772	0/0:23,0:22:15.35:0,15,231	0/0:59,0:55:83.31:0,83,1320	0/1:25,10:31:99:355,0,474	0/1:36,12:46:99:194,0,366	0/0:49,0:43:1.29:0,1,768	0/1:35,0:31:11.40:11,0,539	0/0:25,0:22:37.06:0,37,647	0/1:21,0:19:10.31:10,0,356	0/1:21,3:11:99:206,0,228	0/1:17,3:20:99:164,0,163	0/0:115,0:103:99:0,104,1769	0/1:25,4:27:31.30:31,0,68	0/0:24,0:24:26.89:0,27,444	0/0:47,1:47:55.69:0,56,901	0/0:17,0:17:16.83:0,17,272	0/1:50,0:43:0.24:0,0,1122	0/1:15,4:18:99:128,0,510	0/1:14,0:12:4.06:4,0,261
chr10	82243350	.	GTC	G	1110.12	PASS	AB=0.943;AC=15;AF=0.268;AN=56;BaseQRankSum=1.989;DP=1044;FS=0.447;HRun=0;HaplotypeScore=289.6129;InbreedingCoeff=-0.1878;MQ=37.18;MQ0=51;MQRankSum=-3.811;QD=2.74;ReadPosRankSum=-3.164;VQSLOD=1.8286;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,2:25:19.30:147,19,0	0/0:9,1:10:7.07:0,7,54	0/0:60,0:4:8.97:0,9,102	0/0:83,0:11:14.91:0,15,332	0/0:28,3:30:35.93:0,36,423	0/0:22,0:20:14.42:0,14,229	0/0:46,1:36:6.47:0,6,271	0/1:29,0:15:10.52:11,0,217	0/0:43,1:43:21.70:0,22,614	0/1:36,5:37:99:185,0,825	0/1:18,3:21:0.39:0,0,184	0/0:57,2:55:65.11:0,65,1173	0/1:33,1:31:99:108,0,413	0/1:45,2:46:59.36:59,0,270	0/0:43,4:42:23.91:0,24,725	0/0:33,2:31:10.79:0,11,514	0/1:24,1:22:21.92:22,0,580	0/1:20,0:18:66.67:67,0,289	0/1:24,0:11:37.83:38,0,175	0/1:20,1:20:99:102,0,144	0/0:111,3:101:99:0,111,1630	0/1:29,1:27:20.20:20,0,69	0/0:23,1:24:32.03:0,32,428	0/0:46,0:45:38.46:0,38,766	0/0:16,1:17:17.22:0,17,255	0/1:40,11:44:99:373,0,895	0/1:19,0:18:50.87:51,0,407	0/1:12,2:12:85.84:86,0,147
chr10	82243367	.	A	AGTGT	9706.23	PASS	AB=0.903;AC=31;AF=0.554;AN=56;BaseQRankSum=-7.376;DP=1067;FS=0.000;HRun=0;HaplotypeScore=283.7884;InbreedingCoeff=0.3377;MQ=37.97;MQ0=43;MQRankSum=5.965;QD=13.63;ReadPosRankSum=-0.646;VQSLOD=3.8907;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:21:5.45:0,5,85	1/1:4,3:7:2.93:37,3,0	0/0:40,0:5:2.79:0,3,53	0/0:78,0:13:17.84:0,18,171	1/1:18,8:27:12.02:231,12,0	1/1:19,9:24:12.69:135,13,0	0/0:39,0:28:20.92:0,21,300	0/1:32,0:11:11.94:12,0,93	0/1:27,24:50:15.11:908,0,15	0/1:37,10:44:99:1343,0,164	1/1:14,6:20:5.60:102,6,0	1/1:30,24:50:50.16:851,50,0	0/1:35,0:33:64.51:65,0,543	0/0:48,0:47:2.41:0,2,299	1/1:32,20:47:49.35:857,49,0	1/1:30,17:44:41.18:772,41,0	1/1:21,10:28:5.92:764,6,0	0/1:18,5:21:38.87:429,0,39	0/0:17,0:9:9.29:0,9,131	0/1:24,0:24:29.82:30,0,161	1/1:90,23:101:97.67:1789,98,0	0/0:28,0:27:5.69:0,6,57	1/1:13,9:22:12.03:258,12,0	1/1:36,12:47:41.81:755,42,0	1/1:17,7:23:19.31:333,19,0	0/0:63,0:54:46.77:0,47,1234	0/1:24,0:22:34.35:34,0,272	0/0:14,0:11:16.41:0,16,269
chr10	82243404	.	GTC	G	78.20	PASS	AB=0.950;AC=4;AF=0.071;AN=56;BaseQRankSum=4.394;DP=1243;FS=4.160;HRun=0;HaplotypeScore=335.6910;InbreedingCoeff=0.3990;MQ=41.88;MQ0=46;MQRankSum=-4.286;QD=0.70;ReadPosRankSum=-2.668;VQSLOD=1.5035;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:31:26.92:149,27,0	0/0:14,0:14:7.44:0,7,326	0/0:67,0:4:7.63:0,8,97	0/0:93,1:11:15.95:0,16,176	0/0:24,1:25:23.92:0,24,411	0/0:26,0:23:28.65:0,29,572	0/0:38,2:31:32.78:0,33,629	0/1:33,2:12:20.15:20,0,361	0/0:53,1:51:61.93:0,62,1387	0/0:63,1:57:18.78:0,19,2367	0/0:25,1:26:27.09:0,27,518	0/0:53,2:55:98.08:0,98,1922	0/1:40,2:38:23.38:23,0,1111	0/0:50,0:48:10.31:0,10,1001	0/0:59,3:60:99:0,107,2154	0/0:48,1:48:74.05:0,74,1378	0/0:35,1:35:40.06:0,40,1224	0/0:28,0:26:41.70:0,42,1051	0/0:33,0:16:36.65:0,37,515	0/0:30,0:29:50.92:0,51,859	0/0:128,1:120:99:0,183,3278	0/0:40,1:39:23.88:0,24,412	0/0:21,0:21:14.96:0,15,222	0/0:47,1:47:69.17:0,69,1153	0/0:33,0:32:47.02:0,47,877	0/0:70,0:63:77.31:0,77,2117	0/0:22,0:20:43.97:0,44,700	0/0:11,0:9:18.06:0,18,325
chr10	82243406	.	CTG	C	256.02	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=0.849;DP=1259;FS=1.853;HRun=0;HaplotypeScore=346.1356;InbreedingCoeff=0.6754;MQ=42.39;MQ0=46;MQRankSum=-1.666;QD=3.88;ReadPosRankSum=0.229;VQSLOD=1.9492;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,20:29:27.97:350,28,0	0/0:14,0:14:18.47:0,18,304	0/0:70,1:5:10.53:0,11,110	0/0:98,0:11:12.04:0,12,177	0/0:27,0:27:20.51:0,21,353	0/0:27,0:23:36.04:0,36,546	0/0:36,0:28:32.78:0,33,535	0/1:33,0:12:2.49:2,0,273	0/0:54,0:51:73.43:0,73,1285	0/0:66,0:59:99:0,110,2224	0/0:26,0:26:27.09:0,27,455	0/0:54,1:55:99:0,105,1684	0/0:46,0:42:41.31:0,41,1058	0/0:48,0:46:64.47:0,64,911	0/0:63,0:61:99:0,119,1957	0/0:47,0:46:78.34:0,78,1246	0/0:36,0:35:57.09:0,57,1087	0/0:30,0:28:71.36:0,71,1051	0/0:32,0:18:33.31:0,33,432	0/0:31,0:30:51.15:0,51,811	0/0:137,0:128:99:0,189,2954	0/0:39,1:38:23.89:0,24,400	0/0:22,0:22:11.89:0,12,173	0/0:50,0:49:69.14:0,69,1068	0/0:33,0:32:47.75:0,48,794	0/0:67,0:60:99:0,138,2036	0/0:25,0:22:38.71:0,39,538	0/0:11,0:9:18.06:0,18,302
chr10	82243427	.	AGT	A	3929.39	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-8.555;DP=1177;FS=1.215;HRun=0;HaplotypeScore=333.2056;InbreedingCoeff=0.9460;MQ=43.98;MQ0=42;MQRankSum=2.171;QD=14.77;ReadPosRankSum=-1.043;VQSLOD=2.8595;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:33:43.45:0,43,699	0/0:12,0:12:16.39:0,16,170	0/0:71,0:5:7.81:0,8,88	0/0:96,0:10:17.67:0,18,252	0/0:24,0:24:26.46:0,26,340	0/0:23,0:20:34.75:0,35,494	1/1:16,19:26:23.85:305,24,0	1/1:16,5:9:9.01:99,9,0	0/0:48,0:47:73.60:0,74,859	0/0:64,0:60:99:0,138,1644	0/0:25,0:25:33.10:0,33,401	0/0:54,0:54:99:0,109,1188	1/1:23,25:44:71.50:1050,71,0	1/1:20,26:43:65.81:793,66,0	0/0:59,0:59:99:0,122,1449	0/0:45,0:45:86.38:0,86,970	0/0:34,0:34:37.28:0,37,609	0/0:33,0:31:84.45:0,84,949	1/1:14,5:12:6.45:243,6,0	1/1:20,14:33:54.94:671,55,0	0/0:118,0:115:99:0,182,2021	1/1:10,25:36:29.61:382,30,0	0/0:21,0:21:17.93:0,18,204	0/0:47,0:46:81.10:0,81,909	0/0:34,0:33:57.12:0,57,635	0/0:51,0:48:99:0,114,1759	1/1:14,12:25:9.45:387,9,0	0/0:10,0:10:20.75:0,21,300
chr10	82243439	.	TGA	T	1288.88	PASS	AB=0.989;AC=11;AF=0.196;AN=56;BaseQRankSum=-5.280;DP=1204;FS=1.598;HRun=0;HaplotypeScore=345.4330;InbreedingCoeff=0.1806;MQ=45.97;MQ0=36;MQRankSum=1.273;QD=4.27;ReadPosRankSum=-0.619;VQSLOD=1.8194;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:31:43.09:0,43,812	0/0:9,0:9:20.67:0,21,177	0/0:71,0:6:17.72:0,18,160	0/0:94,0:15:9.75:0,10,267	0/0:23,0:22:29.44:0,29,350	0/0:26,0:23:48.28:0,48,499	0/1:34,0:25:57.45:84,0,57	0/1:21,1:13:8.73:9,0,122	0/0:47,0:46:74.45:0,74,822	0/0:59,0:56:99:0,103,1801	0/0:25,0:25:39.13:0,39,394	0/0:55,1:55:97.06:0,97,1048	0/1:53,2:52:68.76:438,0,69	1/1:50,0:47:7.42:300,7,0	0/0:61,0:61:97.74:0,98,1491	0/0:45,1:46:80.11:0,80,1096	0/0:34,0:34:59.80:0,60,616	0/0:32,0:32:78.11:0,78,834	0/1:24,0:19:63.15:63,0,193	1/1:33,0:32:25.89:249,26,0	0/0:121,1:116:99:0,186,2417	0/1:46,0:45:54.67:101,0,55	0/0:22,0:22:16.68:0,17,157	0/0:53,0:52:92.14:0,92,984	0/0:39,0:38:41.64:0,42,715	0/0:47,0:45:99:0,117,1979	0/1:28,0:27:39.93:178,0,40	0/1:10,0:10:22.02:22,0,319
chr10	82243442	.	GTC	G	5163.56	PASS	AB=0.990;AC=27;AF=0.482;AN=56;BaseQRankSum=4.808;DP=1195;FS=15.776;HRun=0;HaplotypeScore=322.5938;InbreedingCoeff=0.4513;MQ=46.57;MQ0=37;MQRankSum=3.391;QD=7.55;ReadPosRankSum=8.495;VQSLOD=2.8302;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:28:41.40:0,41,775	1/1:9,0:9:14.67:90,15,0	0/0:73,0:7:7.18:0,7,189	0/0:93,0:14:21.62:0,22,209	1/1:20,1:20:4.45:98,4,0	1/1:25,0:23:38.59:212,39,0	0/0:35,1:27:41.83:0,42,563	0/0:20,0:13:29.66:0,30,374	1/1:46,0:45:4.87:298,5,0	0/1:60,1:59:92.33:544,0,92	1/1:25,0:25:42.77:257,43,0	1/1:55,0:54:92.47:633,92,0	0/0:55,0:52:56.24:0,56,970	0/0:49,1:47:25.30:0,25,585	0/1:57,2:59:20.11:572,0,20	0/1:43,1:44:28.42:331,0,28	1/1:33,0:33:38.31:272,38,0	1/1:32,1:33:80.35:464,80,0	0/0:25,0:21:54.65:0,55,667	0/0:34,0:33:53.53:0,54,545	0/1:118,0:112:99:511,0,117	0/0:48,0:47:43.26:0,43,524	1/1:23,1:24:17.32:123,17,0	1/1:52,2:54:56.60:535,57,0	0/1:39,0:38:45.15:186,0,45	0/0:44,0:42:99:0,110,1958	0/1:28,0:27:25.37:25,0,226	0/1:10,0:10:12.09:12,0,256
chr10	82243444	.	CTG	C	13600.80	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=-1.964;DP=1206;FS=11.817;HRun=0;HaplotypeScore=298.7206;InbreedingCoeff=0.8816;MQ=46.76;MQ0=37;MQRankSum=2.861;QD=18.18;ReadPosRankSum=6.018;VQSLOD=3.3247;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:28:39.06:0,39,649	1/1:2,7:9:15.49:219,15,0	0/1:73,0:7:0.19:0,0,163	0/0:87,2:14:15.04:0,15,195	1/1:5,16:20:27.09:341,27,0	1/1:10,17:26:29.08:514,29,0	0/0:38,0:29:39.04:0,39,626	0/0:24,0:18:25.75:0,26,471	1/1:8,36:43:65.91:828,66,0	1/1:28,35:62:99:1477,107,0	1/1:7,17:24:44.83:522,45,0	1/1:15,37:51:99:1423,114,0	0/0:55,0:52:81.21:0,81,1394	0/0:50,0:47:43.15:0,43,735	1/1:22,38:60:99:1524,123,0	1/1:14,30:44:75.15:917,75,0	1/1:4,32:36:42.18:701,42,0	1/1:2,32:34:84.25:1042,84,0	0/0:25,0:21:44.83:0,45,728	0/0:35,0:34:39.88:0,40,596	1/1:41,74:109:99:2002,163,0	0/0:52,0:50:44.80:0,45,678	1/1:3,22:25:18.06:226,18,0	1/1:15,39:54:99:1263,102,0	1/1:13,26:38:37.11:577,37,0	0/0:45,1:44:76.43:0,76,1675	0/1:28,0:27:26.42:26,0,338	0/0:10,0:10:13.60:0,14,203
chr10	82243511	.	AGT	A	5061.40	PASS	AB=0.792;AC=17;AF=0.304;AN=56;BaseQRankSum=1.982;DP=1287;FS=30.199;HRun=0;HaplotypeScore=289.0137;InbreedingCoeff=0.7240;MQ=44.86;MQ0=62;MQRankSum=-4.613;QD=10.81;ReadPosRankSum=-0.556;VQSLOD=3.3733;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:25:39.13:0,39,612	0/0:5,0:5:9.75:0,10,113	0/0:43,0:7:12.88:0,13,134	0/0:73,0:6:11.82:0,12,133	0/0:27,0:25:37.83:0,38,607	0/0:28,0:28:47.69:0,48,681	0/1:52,12:61:99:303,0,477	1/1:22,33:34:84.25:1028,84,0	0/0:48,0:46:54.06:0,54,782	0/0:63,1:63:99:0,104,2205	0/0:29,0:29:60.12:0,60,935	0/0:55,0:54:86.85:0,87,1326	1/1:39,22:56:28.67:890,29,0	1/1:33,17:47:29.99:402,30,0	0/0:56,0:53:77.74:0,78,1091	0/0:35,0:33:45.03:0,45,646	0/0:44,1:43:18.85:0,19,1202	0/0:41,0:40:78.86:0,79,1416	1/1:20,9:17:39.01:431,39,0	1/1:22,13:33:36.11:483,36,0	0/0:97,0:95:99:0,168,2581	1/1:31,27:50:41.59:505,42,0	0/0:33,0:32:61.82:0,62,930	0/0:70,1:71:88.51:0,89,1985	0/0:34,1:35:13.60:0,14,693	0/1:57,13:62:99:467,0,1370	1/1:6,20:25:15.35:215,15,0	0/1:11,9:19:99:337,0,194
chr10	82243545	.	AGT	A	762.33	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.754;DP=1269;FS=0.000;HRun=0;HaplotypeScore=295.9249;InbreedingCoeff=0.9769;MQ=48.08;MQ0=56;MQRankSum=1.322;QD=16.57;ReadPosRankSum=0.487;VQSLOD=3.1006;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,31:41:65.97:857,66,0	0/0:11,0:11:28.63:0,29,432	0/0:60,0:11:17.13:0,17,183	0/0:84,0:14:16.78:0,17,298	0/0:27,0:26:53.24:0,53,925	0/0:21,0:21:24.07:0,24,383	0/0:48,0:45:84.68:0,85,1349	0/0:43,0:32:72.20:0,72,1133	0/0:46,0:45:50.51:0,51,774	0/0:67,0:64:99:0,175,2828	0/0:29,0:29:69.22:0,69,1159	0/0:51,0:51:78.83:0,79,1250	0/0:54,1:50:96.84:0,97,1794	0/0:45,0:44:42.92:0,43,648	0/0:48,0:45:50.41:0,50,795	0/0:42,0:40:63.07:0,63,993	0/0:37,0:35:80.94:0,81,1290	0/0:45,0:45:99:0,114,1840	0/0:23,0:14:32.64:0,33,463	0/0:33,0:33:62.90:0,63,1071	0/0:118,0:117:99:0,250,4173	0/0:50,0:44:53.58:0,54,822	0/0:28,0:27:68.95:0,69,1147	0/0:61,0:61:99:0,112,1775	0/0:30,0:30:64.05:0,64,1018	0/0:73,0:69:99:0,184,3000	0/0:25,0:25:54.39:0,54,804	0/0:22,0:22:63.20:0,63,1048
chr10	82243967	.	G	GT	706.18	PASS	AB=0.787;AC=2;AF=0.036;AN=56;BaseQRankSum=-0.853;DP=763;FS=0.631;HRun=9;HaplotypeScore=80.7780;InbreedingCoeff=0.0204;MQ=60.55;MQ0=22;MQRankSum=1.605;QD=6.42;ReadPosRankSum=0.264;VQSLOD=1.2310;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,27:39:10.79:780,0,11	0/0:8,0:8:20.99:0,21,182	0/0:62,0:23:0.80:0,1,188	0/1:70,0:21:8.12:8,0,79	0/0:30,0:30:83.98:0,84,729	0/0:17,0:16:44.99:0,45,390	0/0:22,0:22:50.92:0,51,442	0/0:28,1:29:68.91:0,69,587	0/0:30,0:30:74.95:0,75,647	0/0:38,0:38:78.34:0,78,809	0/0:21,0:21:44.96:0,45,386	0/0:27,0:27:74.97:0,75,647	0/0:23,0:23:62.98:0,63,546	0/0:19,0:19:56.99:0,57,495	0/0:22,0:22:53.94:0,54,459	0/0:14,0:14:41.94:0,42,354	0/0:26,0:26:71.95:0,72,620	0/0:26,0:26:66.41:0,66,600	0/0:21,1:20:14.77:0,15,348	0/0:25,0:25:62.97:0,63,543	0/0:10,0:10:26.99:0,27,234	0/0:29,0:29:77.97:0,78,673	0/0:26,1:27:44.80:0,45,617	0/0:20,0:20:51.07:0,51,464	0/0:30,0:30:77.97:0,78,675	0/0:29,0:29:71.47:0,71,598	0/0:29,0:29:77.73:0,78,676	0/0:13,0:13:35.98:0,36,312
chr10	82244116	.	CTG	C	4901.55	PASS	AB=0.867;AC=21;AF=0.375;AN=56;BaseQRankSum=5.738;DP=747;FS=2.086;HRun=0;HaplotypeScore=115.9864;InbreedingCoeff=0.8273;MQ=55.98;MQ0=11;MQRankSum=0.286;QD=20.86;ReadPosRankSum=1.066;VQSLOD=5.2444;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,1:38:55.82:0,56,1406	0/1:11,2:13:53.93:54,0,212	0/0:40,0:19:12.37:0,12,141	0/0:39,0:23:22.38:0,22,218	0/0:23,0:23:47.82:0,48,722	0/0:23,0:23:19.90:0,20,785	1/1:23,7:30:42.13:523,42,0	1/1:25,11:34:62.94:788,63,0	0/0:32,1:33:12.52:0,13,1250	0/0:22,0:22:60.13:0,60,913	0/0:20,1:21:0.72:0,1,468	0/0:25,0:25:63.19:0,63,1010	1/1:7,13:18:51.11:617,51,0	1/1:8,12:20:36.11:450,36,0	0/0:15,0:15:42.14:0,42,679	0/0:14,0:14:32.77:0,33,471	0/0:37,0:37:53.30:0,53,1380	0/0:34,0:34:84.15:0,84,1244	1/1:13,4:14:23.36:304,23,0	1/1:12,11:23:33.06:385,33,0	0/0:48,0:48:99:0,114,1792	1/1:11,11:22:45.14:562,45,0	0/0:19,1:20:4.62:0,5,603	0/0:44,5:49:46.24:0,46,1744	0/0:30,0:30:61.06:0,61,913	1/1:3,18:21:1.61:550,2,0	1/1:5,15:20:42.10:498,42,0	1/1:10,2:11:15:170,15,0
chr10	82244168	.	GTCTGTGTGAGCATC	G	342.33	PASS	AB=0.891;AC=5;AF=0.089;AN=56;BaseQRankSum=6.219;DP=786;FS=0.809;HRun=0;HaplotypeScore=299.0947;InbreedingCoeff=-0.0944;MQ=58.27;MQ0=9;MQRankSum=-4.909;QD=4.08;ReadPosRankSum=-3.628;VQSLOD=1.6303;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:49:99:0,132,7313	0/0:9,0:9:17.68:0,18,829	0/0:56,0:21:36.21:0,36,1137	0/0:66,0:33:66.48:0,66,1622	0/0:24,0:24:69.18:0,69,3609	0/0:20,0:20:60.21:0,60,3116	0/1:27,0:27:10.43:10,0,1424	0/0:30,0:29:62.42:0,62,1615	0/0:31,0:31:87.73:0,88,4944	0/0:25,0:25:72.07:0,72,3560	0/0:21,0:21:45.03:0,45,2315	0/0:30,0:30:90.23:0,90,4429	0/1:17,0:17:80.49:80,0,613	0/0:23,0:23:46.89:0,47,1283	0/0:19,0:19:57.20:0,57,3264	0/0:19,0:19:57.20:0,57,3463	0/0:37,0:37:99:0,105,5661	0/0:35,0:35:99:0,105,5069	0/1:13,0:11:9.38:9,0,652	0/0:23,0:23:32:0,32,393	0/0:54,0:53:99:0,111,6684	0/0:16,0:16:33.36:0,33,894	0/0:18,0:18:42.13:0,42,2188	0/0:44,0:44:99:0,114,6126	0/0:31,0:31:64.41:0,64,3978	0/1:15,2:18:99:286,0,1510	0/0:19,0:19:39.11:0,39,1132	0/1:3,5:9:69.53:70,0,98
chr10	82244182	.	C	CTGTGTG	3838.98	PASS	AB=0.659;AC=19;AF=0.339;AN=56;BaseQRankSum=-0.129;DP=756;FS=4.402;HRun=0;HaplotypeScore=184.2434;InbreedingCoeff=0.8324;MQ=57.11;MQ0=2;MQRankSum=-6.213;QD=18.37;ReadPosRankSum=-3.496;VQSLOD=2.3117;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:49:99:0,104,2025	0/0:6,0:7:12.50:0,12,189	0/0:39,0:20:26.34:0,26,351	0/0:47,0:27:24.47:0,24,441	0/0:23,0:24:60.21:0,60,1261	0/0:20,0:20:45.15:0,45,946	0/1:12,12:27:26.89:385,0,27	1/1:22,8:32:36.12:932,36,0	0/0:28,0:31:78.24:0,78,1510	0/0:27,0:28:63.16:0,63,1283	0/0:15,0:16:39.12:0,39,750	0/0:27,0:28:63.20:0,63,1274	1/1:4,11:18:21.07:624,21,0	1/1:5,20:28:16.48:399,16,0	0/0:22,0:23:54.18:0,54,1136	0/0:19,0:20:60.21:0,60,1264	0/0:36,0:36:69.21:0,69,1429	0/0:35,0:36:87.30:0,87,1841	1/1:8,5:12:18.06:578,18,0	1/1:6,15:23:5.28:138,5,0	0/0:51,0:51:82.67:0,83,1970	1/1:7,8:19:3.01:39,3,0	0/0:16,0:17:39.13:0,39,814	0/0:40,0:40:78.72:0,79,1615	0/0:31,0:32:63.22:0,63,1324	1/1:17,0:17:21.06:374,21,0	1/1:8,11:22:13.26:342,13,0	1/1:8,0:9:3:29,3,0
chr10	82246601	.	GATAAATAAATAAATAA	G	2926.75	PASS	AB=0.781;AC=24;AF=0.571;AN=42;BaseQRankSum=5.203;DP=291;FS=0.942;HRun=0;HaplotypeScore=122.8398;InbreedingCoeff=0.4415;MQ=71.02;MQ0=0;MQRankSum=-3.265;QD=18.29;ReadPosRankSum=1.751;VQSLOD=2.4438;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:15:27.09:0,27,1908	1/1:1,3:4:6.02:262,6,0	./.	./.	1/1:16,8:24:4.31:232,4,0	1/1:8,7:15:12.04:524,12,0	0/0:7,0:7:3.01:0,3,223	0/0:30,0:28:15.05:0,15,479	1/1:6,3:9:3.01:131,3,0	1/1:10,5:15:15:234,15,0	1/1:11,3:14:9.03:337,9,0	./.	./.	0/0:10,0:10:9.03:0,9,586	1/1:2,3:5:6.02:262,6,0	1/1:5,4:9:6.02:262,6,0	1/1:16,6:22:3.12:239,3,0	0/0:8,0:8:2.69:0,3,8	0/0:10,0:10:12.04:0,12,823	./.	./.	0/0:8,0:8:3.01:0,3,155	1/1:7,1:8:3.01:107,3,0	./.	1/1:10,3:13:6.02:262,6,0	0/1:10,0:13:45.16:45,0,106	0/0:8,0:8:3.01:0,3,218	0/1:6,1:9:69.68:179,0,70
chr10	82247580	.	AAAAG	A	2263.02	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-8.325;DP=475;FS=8.382;HRun=0;HaplotypeScore=111.9341;InbreedingCoeff=0.3374;MQ=48.22;MQ0=5;MQRankSum=5.565;QD=5.69;ReadPosRankSum=-2.731;VQSLOD=0.7760;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:2.01:2,0,64	1/1:11,1:11:6.80:63,7,0	0/1:13,0:7:8.84:9,0,70	0/0:13,0:6:6.29:0,6,66	1/1:29,2:30:37.31:352,37,0	1/1:9,1:10:15.03:166,15,0	0/1:17,0:16:36.49:36,0,140	0/1:36,0:34:51.64:52,0,273	1/1:12,0:12:23.65:168,24,0	1/1:17,0:16:28.98:216,29,0	1/1:10,0:10:8.97:77,9,0	1/1:21,0:21:10.11:75,10,0	0/0:15,0:15:15.96:0,16,225	0/0:11,0:10:17.89:0,18,158	1/1:10,1:11:11.92:125,12,0	1/1:7,0:7:8.77:50,9,0	1/1:28,1:28:37.30:294,37,0	1/1:19,0:17:5.42:33,5,0	0/1:22,0:22:84.10:84,0,177	0/1:25,0:25:99:175,0,207	1/1:7,0:6:3:26,3,0	0/0:21,0:21:29.72:0,30,266	1/1:13,0:12:5.82:35,6,0	1/1:12,1:13:11.85:107,12,0	1/1:22,1:22:17.82:162,18,0	0/1:17,0:17:62.68:63,0,85	0/0:17,0:17:27.08:0,27,328	1/1:5,0:5:8.78:75,9,0
chr10	82247581	.	AAAG	A	3589.23	PASS	AB=0.958;AC=40;AF=0.714;AN=56;BaseQRankSum=-8.264;DP=475;FS=2.243;HRun=0;HaplotypeScore=100.1704;InbreedingCoeff=-0.0169;MQ=49.76;MQ0=5;MQRankSum=2.955;QD=7.96;ReadPosRankSum=-2.752;VQSLOD=2.4579;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:7.89:91,0,8	1/1:7,5:11:4.17:84,4,0	0/1:14,0:8:7.06:7,0,58	0/0:13,0:6:0.26:0,0,52	1/1:26,5:30:38.29:414,38,0	1/1:11,0:11:18.90:174,19,0	0/1:16,0:15:48:49,0,48	0/1:37,0:35:88.45:102,0,88	1/1:10,2:12:19.91:241,20,0	1/1:12,3:14:30.53:325,31,0	1/1:10,0:10:11.18:107,11,0	1/1:19,1:20:35.90:265,36,0	0/1:15,0:15:3.92:4,0,106	0/0:11,0:10:9.18:0,9,61	1/1:5,6:11:12.03:137,12,0	1/1:5,2:7:11.52:144,12,0	1/1:23,6:28:1.67:374,2,0	1/1:18,1:17:7.97:89,8,0	0/1:22,0:22:70.22:135,0,70	0/1:25,0:25:99:181,0,113	0/1:6,1:6:10.68:22,0,11	0/1:21,0:21:3.03:3,0,89	0/1:5,8:12:6.71:49,0,7	1/1:12,1:13:20.84:174,21,0	1/1:19,4:22:6.74:261,7,0	0/1:17,0:17:16.97:76,0,17	0/1:18,0:18:0.93:1,0,172	1/1:5,0:5:10.23:79,10,0
chr10	82247582	.	AAG	A	3587.87	PASS	AB=0.987;AC=43;AF=0.768;AN=56;BaseQRankSum=-7.430;DP=471;FS=11.936;HRun=0;HaplotypeScore=92.2039;InbreedingCoeff=0.0536;MQ=50.02;MQ0=5;MQRankSum=3.846;QD=8.34;ReadPosRankSum=-3.755;VQSLOD=1.1030;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:6.50:0,7,69	1/1:11,1:11:11.43:68,11,0	0/1:14,0:8:6.49:6,0,60	0/0:13,0:6:5.14:0,5,63	1/1:29,1:29:50.58:381,51,0	1/1:10,0:10:19.21:150,19,0	1/1:16,0:15:14.51:119,15,0	1/1:37,0:35:4.18:143,4,0	1/1:11,1:12:10.37:206,10,0	1/1:15,0:14:31.78:271,32,0	1/1:9,1:10:9.48:118,9,0	1/1:20,1:21:33.86:243,34,0	0/1:15,0:15:11.35:59,0,11	1/1:12,0:11:2.64:42,3,0	1/1:10,1:11:11.98:99,12,0	1/1:6,1:7:9.77:82,10,0	0/1:27,1:27:20.08:269,0,20	1/1:19,0:17:9.13:114,9,0	1/1:22,0:22:4.81:162,5,0	0/1:25,0:25:9.77:205,0,10	0/1:7,0:6:16.48:19,0,16	0/1:21,0:21:6.33:80,0,6	0/1:12,0:11:11.74:35,0,12	1/1:11,2:13:21.27:182,21,0	0/1:21,2:22:3.62:228,0,4	1/1:17,0:17:35.54:203,36,0	0/1:16,0:16:6.64:7,0,53	1/1:5,0:5:12.44:98,12,0
chr10	82247583	.	AG	A	4657.42	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=-3.328;DP=443;FS=23.594;HRun=1;HaplotypeScore=78.6180;InbreedingCoeff=0.3776;MQ=52.87;MQ0=5;MQRankSum=-0.685;QD=11.53;ReadPosRankSum=-1.193;VQSLOD=1.5732;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:39.40:0,39,176	1/1:9,1:9:9.89:49,10,0	0/1:14,0:8:10.56:11,0,65	0/0:14,0:7:8.10:0,8,75	1/1:26,1:26:56.99:351,57,0	1/1:7,0:7:17.76:127,18,0	1/1:16,0:15:37.39:215,37,0	1/1:34,0:32:56.47:325,56,0	1/1:10,0:10:4.61:171,5,0	1/1:13,0:12:28.71:239,29,0	1/1:8,0:8:15.30:110,15,0	1/1:19,1:20:26.69:222,27,0	1/1:15,0:15:33.15:182,33,0	1/1:11,0:11:24.16:148,24,0	1/1:8,1:9:11.77:73,12,0	1/1:6,0:6:13.77:74,14,0	0/1:24,0:23:33.18:231,0,33	1/1:15,2:15:19.08:139,19,0	1/1:22,0:22:49.64:288,50,0	1/1:27,0:27:61.47:412,61,0	0/1:7,0:6:5.99:57,0,6	1/1:20,1:21:39.87:250,40,0	0/1:12,0:11:7.60:29,0,8	1/1:13,1:14:24.72:159,25,0	1/1:19,2:20:10.47:218,10,0	1/1:18,0:18:51.11:387,51,0	1/1:15,0:15:20.17:96,20,0	1/1:5,0:5:10.59:95,11,0
chr10	82248720	.	CA	C	935.92	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.403;DP=425;FS=5.869;HRun=7;HaplotypeScore=40.5367;InbreedingCoeff=0.9070;MQ=71.86;MQ0=0;MQRankSum=-0.877;QD=25.30;ReadPosRankSum=1.507;VQSLOD=3.9719;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.25:0,84,1042	0/0:7,0:7:21.07:0,21,264	0/0:12,0:11:3.95:0,4,222	0/0:14,0:14:21.04:0,21,235	0/0:17,0:17:48.15:0,48,603	0/0:14,0:14:42.13:0,42,528	0/0:9,0:9:18.06:0,18,226	0/0:33,0:33:90.26:0,90,1097	0/0:9,0:9:27.01:0,27,294	0/0:20,0:20:51.16:0,51,642	0/0:18,0:18:48.15:0,48,598	0/0:11,0:11:33.09:0,33,402	0/0:9,0:9:24.06:0,24,289	0/0:11,0:11:27.07:0,27,322	0/0:13,0:13:33.08:0,33,389	0/0:10,0:10:30.07:0,30,351	0/0:34,0:34:84.27:0,84,1055	0/0:23,0:23:57.09:0,57,666	0/0:15,0:16:42.08:0,42,472	0/0:13,0:13:36.12:0,36,453	0/0:8,0:8:21.07:0,21,264	0/0:9,0:9:21.05:0,21,251	0/0:14,0:14:36.12:0,36,453	0/0:5,0:5:15.05:0,15,189	0/0:13,0:13:36.11:0,36,452	1/1:2,20:22:60.10:598,60,0	0/0:16,0:16:39.10:0,39,463	1/1:0,15:15:45.10:459,45,0
chr10	82249020	.	G	GAC	2703.19	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.718;DP=606;FS=1.129;HRun=0;HaplotypeScore=86.4144;InbreedingCoeff=0.9931;MQ=83.34;MQ0=0;MQRankSum=-1.409;QD=42.24;ReadPosRankSum=1.387;VQSLOD=5.4714;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.12:0,54,798	0/0:7,0:7:21.07:0,21,322	0/0:36,0:32:68.63:0,69,981	0/0:49,0:48:99:0,107,1636	0/0:13,0:13:33.11:0,33,505	0/0:19,0:19:54.18:0,54,826	0/0:23,0:23:63.20:0,63,938	0/0:36,0:36:99:0,102,1534	0/0:23,0:23:63.21:0,63,962	0/0:28,0:28:81.27:0,81,1235	0/0:7,0:7:21.07:0,21,320	0/0:28,0:28:78.25:0,78,1164	0/0:17,0:17:51.17:0,51,777	0/0:21,0:21:60.20:0,60,918	0/0:26,0:26:75.24:0,75,1116	0/0:24,0:24:72.23:0,72,1077	0/0:25,0:25:69.15:0,69,1004	0/0:21,0:21:57.19:0,57,861	0/0:21,0:21:63.21:0,63,962	0/0:14,0:14:42.13:0,42,616	0/0:16,0:16:45.13:0,45,664	0/0:8,0:8:21.07:0,21,320	0/0:10,0:10:27.09:0,27,413	0/0:15,0:15:45.07:0,45,637	0/0:16,0:16:45.15:0,45,687	1/1:3,32:35:96.31:1803,96,0	0/0:18,0:18:54.10:0,54,777	1/1:0,28:29:54.07:1021,54,0
chr10	82249159	.	T	TACACACACACACAC	17551.98	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=4.761;DP=611;FS=0.000;HRun=0;HaplotypeScore=290.4400;InbreedingCoeff=0.7540;MQ=61.08;MQ0=0;MQRankSum=-6.511;QD=32.69;ReadPosRankSum=1.140;VQSLOD=3.6861;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:22:16.79:276,17,0	1/1:11,0:11:14.96:225,15,0	0/0:35,0:28:37.61:0,38,795	0/0:35,0:26:43.44:0,43,994	1/1:17,0:17:12.42:211,12,0	1/1:19,0:21:29.81:940,30,0	1/1:20,0:20:21.94:617,22,0	1/1:27,0:26:57.15:1083,57,0	1/1:27,0:27:24.04:706,24,0	1/1:22,0:22:50.75:1042,51,0	1/1:11,0:11:2.84:14,3,0	1/1:21,0:23:26.96:574,27,0	1/1:13,5:19:8.75:816,9,0	1/1:29,0:29:44.55:1194,45,0	1/1:29,0:31:36.07:1163,36,0	1/1:18,0:19:26.14:740,26,0	1/1:24,2:26:39.67:1483,40,0	1/1:20,0:21:51.96:1260,52,0	1/1:17,0:17:40.55:1130,41,0	./.	1/1:44,0:44:26.45:460,26,0	1/1:17,0:17:6.01:69,6,0	1/1:12,0:12:8.74:62,9,0	1/1:32,0:35:20.65:495,21,0	1/1:10,0:13:9.03:477,9,0	1/1:27,0:27:62.88:1638,63,0	1/1:5,8:14:15.01:666,15,0	1/1:8,0:8:9.02:211,9,0
chr10	82249168	.	ACG	A	3215.99	PASS	AB=0.932;AC=31;AF=0.574;AN=54;BaseQRankSum=-3.842;DP=603;FS=1.864;HRun=0;HaplotypeScore=192.0304;InbreedingCoeff=-0.2769;MQ=52.14;MQ0=0;MQRankSum=3.118;QD=6.13;ReadPosRankSum=0.866;VQSLOD=3.5112;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,4:22:19.45:260,19,0	1/1:8,3:11:4.66:77,5,0	0/0:29,0:22:42.39:0,42,711	0/0:32,0:23:62.22:0,62,944	1/1:17,0:17:4.63:83,5,0	0/1:24,0:22:34.86:56,0,35	0/1:20,2:22:15.16:133,0,15	0/1:28,3:30:99:438,0,229	0/1:25,0:25:33.23:67,0,33	0/1:17,2:19:99:228,0,347	0/1:7,4:11:5.03:7,0,5	0/1:22,0:22:11.64:114,0,12	0/1:18,0:18:19.92:20,0,130	0/1:26,8:34:0.50:243,0,1	0/1:29,0:29:16.86:148,0,17	0/1:21,0:21:39.60:40,0,87	0/1:22,5:27:51.07:183,0,51	0/1:23,0:23:99:141,0,141	0/1:10,6:16:99:228,0,164	./.	1/1:44,0:44:24.27:158,24,0	1/1:8,4:12:6.01:69,6,0	0/1:12,0:12:37.35:41,0,37	0/1:38,0:38:17.78:142,0,18	0/0:13,0:13:7.26:0,7,27	1/1:21,5:26:18.80:443,19,0	0/1:14,0:14:6.16:6,0,85	1/1:5,0:5:7.55:54,8,0
chr10	82249178	.	A	ACACG	3498.54	PASS	AB=0.979;AC=29;AF=0.537;AN=54;BaseQRankSum=5.188;DP=638;FS=13.950;HRun=0;HaplotypeScore=222.5729;InbreedingCoeff=-0.2690;MQ=42.99;MQ0=2;MQRankSum=-3.249;QD=6.45;ReadPosRankSum=4.453;VQSLOD=1.3833;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:12.89:0,13,94	0/1:10,0:10:16.09:43,0,16	0/0:27,0:18:31.29:0,31,515	0/0:30,0:20:50.17:0,50,618	1/1:16,0:16:8.78:99,9,0	0/1:25,2:27:58.27:293,0,58	0/1:23,0:24:99:102,0,195	0/1:38,0:37:99:169,0,343	0/1:23,1:25:10.64:121,0,11	0/1:23,0:23:53.32:238,0,53	1/1:10,0:10:2.83:24,3,0	1/1:19,0:19:20.82:256,21,0	0/1:18,0:18:55.83:92,0,56	0/1:31,0:32:16.48:47,0,16	0/1:28,2:30:18.91:261,0,19	1/1:19,3:22:8.57:238,9,0	0/1:31,0:32:16.81:114,0,17	0/1:22,0:22:22.45:346,0,22	0/1:21,0:21:7.69:8,0,127	./.	0/1:48,0:47:67.31:94,0,67	0/0:11,0:11:3:0,3,26	0/1:15,0:15:14.48:39,0,14	0/1:37,1:38:9.39:78,0,9	1/1:14,1:15:9.03:138,9,0	1/1:34,0:33:12.37:413,12,0	0/1:13,0:13:0.29:165,0,0	0/1:9,0:9:5.48:120,0,5
chr10	82249180	.	A	ACG	551.05	PASS	AB=0.991;AC=19;AF=0.352;AN=54;BaseQRankSum=6.883;DP=634;FS=14.468;HRun=0;HaplotypeScore=216.3292;InbreedingCoeff=-0.0070;MQ=43.47;MQ0=2;MQRankSum=-2.068;QD=1.51;ReadPosRankSum=2.419;VQSLOD=1.4278;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:7.88:0,8,122	0/0:9,0:9:4.35:0,4,36	0/0:26,0:17:36.76:0,37,518	0/0:30,0:20:49.47:0,49,613	1/1:15,0:15:8.32:72,8,0	0/1:27,1:27:63.06:89,0,63	0/1:25,0:25:8.29:8,0,267	0/0:38,0:38:33.36:0,33,787	0/1:25,0:25:29.06:29,0,32	0/1:23,0:23:28.13:28,0,189	1/1:10,0:10:2.83:24,3,0	1/1:20,0:20:8.99:105,9,0	0/0:16,0:16:25.27:0,25,285	0/1:33,0:33:1.23:1,0,71	0/1:29,1:30:75.37:99,0,75	0/1:23,0:23:30.39:30,0,73	0/0:32,0:32:6.29:0,6,66	0/1:22,0:22:50.92:51,0,132	0/0:21,0:21:24.95:0,25,317	./.	0/1:47,0:46:18.26:18,0,107	0/0:11,0:11:3:0,3,26	0/1:15,0:15:12.81:13,0,32	0/0:36,1:37:14.36:0,14,83	1/1:15,0:15:4.67:47,5,0	0/1:33,1:33:86.22:96,0,86	0/0:13,0:13:11.53:0,12,148	0/0:9,0:9:14.60:0,15,94
chr10	82249182	.	A	ACGCACGCACG	4433.22	PASS	AB=0.873;AC=33;AF=0.589;AN=56;BaseQRankSum=1.929;DP=651;FS=8.797;HRun=0;HaplotypeScore=272.2868;InbreedingCoeff=-0.2099;MQ=43.97;MQ0=2;MQRankSum=-1.234;QD=7.76;ReadPosRankSum=0.755;VQSLOD=2.2710;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:20:40.29:40,0,88	1/1:4,0:8:1.36:3,1,0	0/0:28,0:19:35.48:0,35,529	0/0:31,0:21:51.62:0,52,768	0/0:11,0:15:2.50:0,3,8	0/1:17,0:25:45.26:282,0,45	0/1:25,0:26:99:203,0,233	0/1:41,0:40:99:132,0,468	0/1:18,0:24:0.60:1,0,41	0/1:8,0:27:41.98:95,0,42	1/1:9,0:11:1.24:3,1,0	1/1:17,0:22:6.08:209,6,0	0/1:16,0:16:27.92:28,0,122	1/1:30,0:31:15.80:133,16,0	0/1:22,0:31:12.72:237,0,13	0/1:15,0:23:44.79:60,0,45	1/1:16,0:32:2.68:287,3,0	0/1:16,0:22:99:215,0,111	0/1:23,0:23:99:144,0,221	0/0:5,0:6:0:0,0,0	0/1:46,0:47:64.60:116,0,65	1/1:12,0:12:2.96:19,3,0	0/1:11,0:13:16.93:18,0,17	0/1:29,0:36:8.37:8,0,30	1/1:3,0:18:9.03:272,9,0	1/1:17,13:35:35.39:1356,35,0	0/1:14,0:14:50.62:146,0,51	1/1:8,1:9:20.40:425,20,0
chr10	82251447	.	TACACACACACACAC	T	16797.11	PASS	AB=0.789;AC=35;AF=0.625;AN=56;BaseQRankSum=3.721;DP=661;FS=4.291;HRun=0;HaplotypeScore=315.0963;InbreedingCoeff=0.8701;MQ=51.16;MQ0=12;MQRankSum=-9.756;QD=41.37;ReadPosRankSum=-0.287;VQSLOD=3.8217;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:30:86.41:86,0,261	1/1:6,5:11:23.75:630,24,0	0/0:29,0:16:12.01:0,12,153	0/0:38,0:22:15.52:0,16,258	1/1:7,12:20:24.85:517,25,0	1/1:8,10:19:35.80:1035,36,0	0/0:14,0:22:41.55:0,42,463	0/0:25,0:31:14.48:0,14,416	1/1:19,23:42:69.15:2167,69,0	1/1:16,9:25:34:1218,34,0	1/1:7,7:14:18.02:426,18,0	1/1:12,18:31:72.08:1928,72,0	0/0:27,0:27:66.23:0,66,3299	0/0:33,0:35:66.23:0,66,3703	1/1:15,19:34:81.08:2028,81,0	1/1:12,13:25:42.10:1309,42,0	1/1:6,10:16:12.04:476,12,0	1/1:15,3:18:6.07:452,6,0	0/0:9,0:13:24.06:0,24,310	0/0:6,0:12:11.78:0,12,99	1/1:28,2:31:11.77:171,12,0	0/0:17,0:18:33.09:0,33,1232	1/1:8,4:11:8.99:230,9,0	1/1:16,5:21:11.98:190,12,0	1/1:8,9:17:30.19:895,30,0	1/1:3,18:22:23.64:2204,24,0	0/0:10,0:27:39.49:0,39,519	1/1:2,16:18:21.07:834,21,0
chr10	82251512	.	ATGCG	A	2203.23	PASS	AB=0.964;AC=21;AF=0.375;AN=56;BaseQRankSum=8.181;DP=710;FS=10.357;HRun=0;HaplotypeScore=285.9555;InbreedingCoeff=-0.0727;MQ=50.03;MQ0=1;MQRankSum=-9.866;QD=5.12;ReadPosRankSum=-9.828;VQSLOD=-0.5109;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:68.67:0,69,1366	0/1:10,0:10:35.76:36,0,92	0/0:33,0:30:87.27:0,87,2349	0/0:39,0:25:65.78:0,66,1460	0/1:23,0:23:30.35:122,0,30	0/1:27,0:27:99:164,0,102	0/1:31,1:32:99:238,0,914	0/0:33,0:33:99:0,99,2711	1/1:44,0:44:12.68:277,13,0	0/1:25,0:25:33.47:33,0,778	1/1:12,0:12:7.11:90,7,0	0/1:39,0:40:99:251,0,101	0/0:27,0:27:71.96:0,72,1655	0/0:31,0:31:87.28:0,87,1948	0/1:40,0:40:31.53:254,0,32	0/1:31,0:31:28.57:266,0,29	0/1:17,2:19:34.66:35,0,283	0/1:11,0:11:33.56:34,0,184	0/0:18,0:18:54.19:0,54,1493	0/0:16,0:16:45.15:0,45,1296	0/1:13,11:24:88.65:89,0,202	0/0:21,0:21:51.64:0,52,1062	0/1:14,0:14:0.55:79,0,1	0/1:16,0:16:0.64:1,0,1	1/1:17,0:16:15.05:238,15,0	0/1:36,0:36:69.45:69,0,1238	0/0:25,0:25:60.21:0,60,1592	0/1:8,1:8:99:100,0,122
chr10	82251516	.	G	GCATACATACATACATACATA	19124.54	PASS	AB=0.613;AC=37;AF=0.661;AN=56;BaseQRankSum=-6.005;DP=871;FS=2.606;HRun=0;HaplotypeScore=416.1802;InbreedingCoeff=0.6753;MQ=50.32;MQ0=1;MQRankSum=-10.814;QD=29.98;ReadPosRankSum=-4.662;VQSLOD=1.5617;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:40:51.44:0,51,961	1/1:4,0:13:9.03:471,9,0	0/0:36,0:31:10.08:0,10,717	0/0:40,0:29:20.57:0,21,545	1/1:9,0:27:9.77:395,10,0	1/1:13,20:35:21.07:1436,21,0	1/1:25,0:35:47.26:846,47,0	0/0:32,0:32:42.12:0,42,1192	1/1:20,31:56:24.08:1314,24,0	1/1:9,0:43:65.48:3133,65,0	1/1:7,0:28:6.02:205,6,0	1/1:21,23:51:27.39:1943,27,0	0/1:11,0:30:12.48:12,0,766	0/1:10,0:33:13.80:14,0,975	1/1:18,35:56:27.09:1802,27,0	1/1:8,29:43:24.08:1544,24,0	1/1:16,0:17:14.35:396,14,0	0/1:7,7:16:31.08:167,0,31	0/0:18,0:18:21.06:0,21,875	0/0:16,0:16:42.14:0,42,2025	1/1:22,0:22:7.42:363,7,0	0/0:8,0:28:51.54:0,52,893	1/1:5,14:23:12.04:870,12,0	1/1:10,7:21:0.47:1,0,0	1/1:10,15:29:15.05:811,15,0	1/1:19,0:48:72.70:3179,73,0	0/0:22,0:23:51.16:0,51,2142	1/1:9,0:9:6.02:221,6,0
chr10	82252781	.	T	TG	1121.80	PASS	AB=0.720;AC=36;AF=0.857;AN=42;BaseQRankSum=-2.835;DP=120;FS=5.570;HRun=5;HaplotypeScore=23.4446;InbreedingCoeff=0.1393;MQ=84.84;MQ0=1;MQRankSum=0.155;QD=12.19;ReadPosRankSum=0.000;VQSLOD=0.4048;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,7:10:9.03:110,9,0	1/1:2,0:2:5.99:60,6,0	0/0:14,1:9:4.10:0,4,21	0/1:16,4:14:8.86:127,0,9	./.	1/1:5,0:5:9.01:101,9,0	1/1:0,4:4:2.86:39,3,0	./.	1/1:4,1:5:11.70:83,12,0	1/1:0,1:1:3.01:39,3,0	./.	./.	1/1:3,0:3:3.01:39,3,0	1/1:3,0:3:2.97:20,3,0	1/1:2,0:2:3.01:39,3,0	1/1:2,0:2:3.01:39,3,0	1/1:0,6:6:12.04:157,12,0	1/1:2,1:3:3.01:39,3,0	1/1:1,2:3:6.01:65,6,0	./.	1/1:3,0:3:5.99:58,6,0	0/0:0,1:1:0:0,0,0	0/1:1,2:3:0:1,0,0	1/1:1,6:7:3.01:39,3,0	./.	1/1:1,0:1:3.01:39,3,0	1/1:4,4:8:9.03:118,9,0	./.
chr10	82252813	.	A	AG	1726.58	PASS	AC=38;AF=0.864;AN=44;BaseQRankSum=-3.017;DP=174;FS=25.056;HRun=2;HaplotypeScore=55.6814;InbreedingCoeff=0.3894;MQ=106.24;MQ0=6;MQRankSum=-2.551;QD=32.58;ReadPosRankSum=0.092;VQSLOD=1.6633;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:3.01:43,3,0	./.	0/0:47,0:24:47.40:0,47,498	0/0:68,0:34:20.48:0,20,326	1/1:1,2:3:5.96:85,6,0	./.	1/1:0,3:3:9.03:129,9,0	1/1:3,7:10:30.06:394,30,0	1/1:1,1:2:6.01:68,6,0	1/1:0,1:1:3.01:43,3,0	1/1:1,1:2:3.01:43,3,0	1/1:0,1:1:3.01:43,3,0	1/1:1,1:2:3.01:43,3,0	1/1:1,2:3:6.02:86,6,0	./.	1/1:0,1:1:3.01:43,3,0	./.	1/1:1,2:3:9.03:125,9,0	1/1:0,2:2:6.02:86,6,0	1/1:0,4:4:12.04:171,12,0	./.	1/1:1,2:3:9.03:129,9,0	1/1:1,3:4:6.02:86,6,0	1/1:0,1:1:3.01:43,3,0	0/0:0,0:1:0:0,0,0	1/1:0,3:3:9.03:129,9,0	./.	1/1:2,0:2:6:54,6,0
chr10	82252828	.	A	AG	2668.44	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=-5.881;DP=195;FS=47.632;HRun=1;HaplotypeScore=48.9892;InbreedingCoeff=0.2939;MQ=105.34;MQ0=7;MQRankSum=-4.193;QD=32.54;ReadPosRankSum=3.684;VQSLOD=0.6051;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:6.02:95,6,0	1/1:2,0:2:3.01:48,3,0	0/0:44,0:23:34.97:0,35,394	0/0:64,1:33:36.66:0,37,470	1/1:2,3:5:2.30:47,2,0	1/1:0,2:2:6.02:96,6,0	1/1:0,3:3:6.02:96,6,0	1/1:0,11:11:33.11:527,33,0	1/1:1,2:3:3.01:48,3,0	1/1:0,1:1:3.01:48,3,0	1/1:0,2:2:3.01:48,3,0	1/1:0,2:2:6.02:95,6,0	1/1:1,1:2:2.56:47,3,0	1/1:0,4:4:9.03:144,9,0	1/1:0,2:2:3.01:46,3,0	1/1:0,3:3:6.02:96,6,0	1/1:0,2:1:3.01:48,3,0	1/1:1,4:5:12.04:191,12,0	1/1:1,2:3:6.02:96,6,0	1/1:0,6:6:18.06:287,18,0	./.	1/1:0,3:3:9.03:140,9,0	1/1:0,4:4:6.02:95,6,0	1/1:0,3:3:6.02:96,6,0	1/1:0,1:1:3.01:47,3,0	1/1:1,3:4:12.04:191,12,0	1/1:0,2:1:3.01:48,3,0	1/1:1,1:2:6.01:75,6,0
chr10	82253006	.	A	AAGAGAGAG	723.04	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=7.141;DP=426;FS=0.872;HRun=0;HaplotypeScore=110.4565;InbreedingCoeff=-0.3989;MQ=65.98;MQ0=11;MQRankSum=-1.894;QD=3.32;ReadPosRankSum=-1.457;VQSLOD=1.8405;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,9:16:2.95:38,3,0	0/1:4,0:4:29.04:29,0,37	0/0:38,0:14:10.40:0,10,244	0/0:67,0:22:6.94:0,7,216	0/1:7,0:7:24.59:25,0,89	0/1:14,0:14:10.64:11,0,224	0/1:15,0:13:65.43:65,0,226	0/0:20,0:20:10.55:0,11,587	0/1:21,0:19:61.10:61,0,289	0/0:8,0:7:21.02:0,21,275	0/1:10,0:10:72.05:72,0,77	0/1:11,0:11:81.86:82,0,216	0/1:11,0:11:99:104,0,130	0/1:13,0:12:77.95:78,0,155	0/1:17,0:17:66:66,0,171	0/1:16,0:15:21.44:21,0,114	0/1:14,0:14:44.54:45,0,358	0/1:6,0:6:8.12:8,0,113	0/0:16,0:16:32.90:0,33,530	0/0:9,0:9:20.50:0,21,221	0/1:21,0:21:42.83:43,0,266	0/1:7,0:7:17.49:17,0,128	0/1:8,0:8:21.82:43,0,22	0/0:17,0:17:23.60:0,24,293	0/0:8,0:8:14.64:0,15,194	0/0:9,0:9:23.98:0,24,310	0/0:14,0:14:36.10:0,36,522	0/1:7,0:7:69.97:75,0,70
chr10	82253921	.	G	GA	625.28	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-4.952;DP=557;FS=0.000;HRun=10;HaplotypeScore=61.1447;InbreedingCoeff=0.7285;MQ=69.70;MQ0=2;MQRankSum=0.909;QD=15.25;ReadPosRankSum=-1.271;VQSLOD=3.4842;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:49:99:0,134,1089	0/0:10,0:10:26.96:0,27,221	0/1:11,0:9:10.78:11,0,73	0/0:15,0:13:23.15:0,23,193	0/0:26,0:26:67.94:0,68,548	0/0:22,0:23:61.96:0,62,498	0/0:25,0:24:62.73:0,63,517	0/0:34,0:34:71.86:0,72,587	0/0:13,0:13:26.93:0,27,221	0/0:23,0:23:59.90:0,60,491	0/0:16,1:17:12.46:0,12,312	0/0:13,0:13:35.95:0,36,295	0/0:12,0:12:29.97:0,30,246	0/0:19,0:19:47.93:0,48,394	0/0:19,0:19:47.94:0,48,394	0/0:20,0:20:50.89:0,51,416	0/0:29,0:29:74.85:0,75,609	0/0:26,0:26:74.91:0,75,616	0/0:14,0:13:35.57:0,36,288	0/0:22,0:22:59.93:0,60,493	0/0:12,0:12:29.94:0,30,243	0/0:13,0:13:38.94:0,39,317	0/0:16,0:16:38.92:0,39,320	0/0:25,0:25:56.85:0,57,462	0/0:18,0:18:38.93:0,39,320	1/1:1,23:23:65.92:669,66,0	0/0:23,0:23:53.86:0,54,439	1/1:2,4:6:6.02:64,6,0
chr10	82254478	.	AG	A	287.33	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.258;DP=858;FS=6.511;HRun=2;HaplotypeScore=96.1114;InbreedingCoeff=0.9993;MQ=82.51;MQ0=0;MQRankSum=-6.317;QD=12.49;ReadPosRankSum=-3.105;VQSLOD=1.1694;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1593	0/0:10,0:10:30.10:0,30,450	0/0:24,0:24:66.20:0,66,940	0/0:27,0:27:36.62:0,37,965	0/0:34,0:34:99:0,102,1499	0/0:19,0:19:57.19:0,57,854	1/1:4,19:23:50.38:382,50,0	0/0:23,0:23:66.22:0,66,971	0/0:39,0:39:99:0,114,1708	0/0:48,0:48:99:0,144,2118	0/0:32,0:32:93.31:0,93,1384	0/0:40,0:40:99:0,120,1776	0/0:36,0:36:99:0,102,1507	0/0:30,0:30:90.30:0,90,1334	0/0:37,0:37:99:0,105,1496	0/0:35,0:35:99:0,102,1503	0/0:28,0:28:84.26:0,84,1219	0/0:24,0:23:66.18:0,66,955	0/0:21,0:21:63.19:0,63,901	0/0:35,0:35:99:0,102,1528	0/0:53,0:53:99:0,160,2376	0/0:38,0:38:99:0,114,1669	0/0:30,0:30:90.30:0,90,1343	0/0:35,0:35:99:0,105,1552	0/0:22,0:22:66.22:0,66,989	0/0:34,0:34:99:0,99,1441	0/0:31,0:31:93.31:0,93,1390	0/0:14,0:14:42.14:0,42,629
chr10	82254483	.	AAAT	A	464.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.053;DP=840;FS=4.827;HRun=0;HaplotypeScore=128.0441;InbreedingCoeff=0.9995;MQ=82.98;MQ0=0;MQRankSum=-6.947;QD=24.43;ReadPosRankSum=-2.528;VQSLOD=2.6314;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,2625	0/0:10,0:10:30.10:0,30,740	0/0:24,0:24:72.25:0,72,1704	0/0:27,0:27:78.23:0,78,1768	0/0:33,0:33:99:0,99,2422	0/0:18,0:18:54.19:0,54,1327	1/1:0,19:19:51.11:559,51,0	0/0:24,0:24:72.25:0,72,1724	0/0:38,0:38:99:0,114,2666	0/0:47,0:47:99:0,141,3421	0/0:32,0:32:96.33:0,96,2346	0/0:39,0:39:99:0,117,2810	0/0:36,0:36:99:0,105,2580	0/0:27,0:27:81.28:0,81,1964	0/0:34,0:34:99:0,102,2441	0/0:33,0:33:99:0,99,2351	0/0:28,0:28:84.29:0,84,2064	0/0:21,0:20:63.22:0,63,1553	0/0:22,0:22:66.23:0,66,1548	0/0:36,0:36:99:0,108,2581	0/0:48,0:48:99:0,144,3519	0/0:37,0:37:99:0,111,2737	0/0:33,0:33:99:0,99,2336	0/0:34,0:34:99:0,102,2490	0/0:23,0:23:69.24:0,69,1697	0/0:31,0:31:93.32:0,93,2291	0/0:33,0:33:99:0,99,2422	0/0:14,0:14:42.14:0,42,1035
chr10	82254488	.	GTTGAAT	G	794.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.839;DP=832;FS=2.142;HRun=0;HaplotypeScore=177.3079;InbreedingCoeff=0.9997;MQ=83.60;MQ0=0;MQRankSum=-6.703;QD=41.80;ReadPosRankSum=-1.996;VQSLOD=3.4868;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,3944	0/0:11,0:11:33.11:0,33,1242	0/0:25,0:25:75.26:0,75,2690	0/0:27,0:27:81.28:0,81,2774	0/0:33,0:33:99:0,99,3598	0/0:19,0:19:57.20:0,57,2052	1/1:0,19:19:48.16:889,48,0	0/0:24,0:24:72.25:0,72,2681	0/0:33,0:33:99:0,99,3725	0/0:46,0:46:99:0,138,5008	0/0:33,0:33:99:0,99,3597	0/0:38,0:38:99:0,114,4146	0/0:35,0:35:99:0,102,3838	0/0:27,0:27:81.28:0,81,3034	0/0:33,0:33:99:0,99,3516	0/0:31,0:31:93.31:0,93,3412	0/0:30,0:30:90.25:0,90,3101	0/0:22,0:21:66.18:0,66,2128	0/0:23,0:23:69.22:0,69,2255	0/0:35,0:35:99:0,105,3510	0/0:47,0:47:99:0,141,4994	0/0:37,0:37:99:0,111,4034	0/0:34,0:34:99:0,102,3564	0/0:34,0:34:99:0,102,3715	0/0:22,0:22:66.21:0,66,2335	0/0:33,0:33:99:0,99,3705	0/0:32,0:32:96.33:0,96,3583	0/0:14,0:14:42.14:0,42,1580
chr10	82257563	.	G	GCATT	6976.55	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=4.472;DP=257;FS=2.010;HRun=0;HaplotypeScore=58.4730;InbreedingCoeff=0.7800;MQ=97.87;MQ0=4;MQRankSum=-7.813;QD=41.04;ReadPosRankSum=1.722;VQSLOD=4.6641;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:22:1.08:474,1,0	1/1:0,2:3:6.02:158,6,0	0/0:30,0:23:60.58:0,61,1111	0/0:22,0:20:47.67:0,48,918	1/1:2,4:6:14.97:333,15,0	1/1:0,5:6:15.05:396,15,0	1/1:17,0:17:21.06:387,21,0	1/1:8,0:8:21.06:267,21,0	1/1:2,3:5:14.96:277,15,0	1/1:0,4:8:18.04:359,18,0	1/1:0,3:5:9.46:174,9,0	1/1:1,3:4:11.97:255,12,0	0/0:13,0:13:33.11:0,33,692	0/0:12,0:12:36.12:0,36,739	1/1:0,10:10:27.09:704,27,0	1/1:1,6:7:18.06:475,18,0	1/1:1,4:5:8.99:153,9,0	1/1:0,4:4:12.04:318,12,0	1/1:5,0:5:15.02:161,15,0	1/1:4,0:4:12.04:158,12,0	1/1:2,5:7:8.99:177,9,0	0/0:10,0:10:25.33:0,25,504	1/1:0,6:7:18.06:468,18,0	1/1:0,5:5:9.03:239,9,0	1/1:0,7:8:21.07:551,21,0	1/1:10,0:10:8.04:215,8,0	1/1:9,0:9:7.07:235,7,0	1/1:3,0:2:3.01:42,3,0
chr10	82257564	.	G	GATTT	10939.28	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-0.576;DP=286;FS=4.566;HRun=0;HaplotypeScore=63.6519;InbreedingCoeff=0.8948;MQ=95.06;MQ0=4;MQRankSum=-9.409;QD=55.25;ReadPosRankSum=-0.358;VQSLOD=5.4980;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,19:26:48.16:1148,48,0	1/1:4,0:4:9.03:198,9,0	0/0:29,0:24:39.63:0,40,907	0/0:22,0:20:42.59:0,43,760	1/1:6,0:6:15.05:395,15,0	1/1:10,0:10:24.07:502,24,0	1/1:2,17:19:42.14:1030,42,0	1/1:1,7:10:27.09:662,27,0	1/1:6,0:6:15.05:356,15,0	1/1:7,0:8:21.03:441,21,0	1/1:7,0:7:18.49:299,18,0	1/1:4,0:4:12.04:294,12,0	0/0:13,0:13:33.11:0,33,616	0/0:12,0:12:36.12:0,36,661	1/1:11,0:11:30.10:753,30,0	1/1:7,0:7:21.06:500,21,0	1/1:5,0:5:12.01:193,12,0	1/1:5,0:5:12.04:316,12,0	1/1:0,5:6:18.06:442,18,0	1/1:1,4:5:15.05:359,15,0	1/1:9,0:9:15.03:301,15,0	0/0:10,0:10:24.97:0,25,428	1/1:7,0:7:21.03:494,21,0	1/1:6,0:6:9.03:237,9,0	1/1:10,0:10:27.09:631,27,0	1/1:2,8:12:30.09:670,30,0	1/1:1,8:9:24.08:638,24,0	1/1:2,2:3:3.01:80,3,0
chr10	82257684	.	T	TTC	623.93	PASS	AB=1.000;AC=32;AF=0.889;AN=36;DP=450;FS=0.000;HRun=0;HaplotypeScore=81.3666;InbreedingCoeff=0.2271;MQ=66.53;MQ0=8;QD=1.99;VQSLOD=1.2422;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:9.47:93,9,0	./.	./.	0/1:33,0:13:0:0,0,0	1/1:13,0:13:6.01:66,6,0	0/1:19,0:19:0:0,0,0	./.	1/1:21,0:20:0.89:2,1,0	1/1:9,2:12:6.01:70,6,0	1/1:14,0:15:11.97:98,12,0	./.	./.	1/1:17,4:20:2.92:44,3,0	0/1:13,0:13:0:0,0,0	./.	1/1:15,0:15:3.47:27,3,0	1/1:18,0:18:3.01:41,3,0	1/1:10,0:11:8.60:65,9,0	./.	./.	./.	0/1:18,0:18:0:0,0,0	./.	1/1:9,0:9:2.99:24,3,0	1/1:16,0:15:2.99:23,3,0	1/1:14,0:13:8.97:73,9,0	1/1:17,1:19:3.48:45,3,0	1/1:11,0:10:3:25,3,0
chr10	82258606	.	CCACTTTATTCT	C	1227.86	PASS	AB=0.933;AC=29;AF=0.725;AN=40;BaseQRankSum=3.515;DP=289;FS=0.000;HRun=0;HaplotypeScore=123.6526;InbreedingCoeff=0.1939;MQ=70.02;MQ0=0;MQRankSum=-5.128;QD=6.33;ReadPosRankSum=1.662;VQSLOD=2.1746;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,1:8:3.47:26,3,0	./.	0/0:17,0:17:51.17:0,51,2408	0/0:9,0:9:21.96:0,22,866	1/1:14,0:14:2.99:24,3,0	0/0:15,0:15:2.22:0,2,7	./.	1/1:18,0:18:3.48:31,3,0	0/1:8,0:8:16.03:21,0,16	1/1:12,1:13:5.47:110,5,0	1/1:12,1:13:6.01:108,6,0	0/1:11,1:12:16.21:78,0,16	1/1:12,1:13:1.75:82,2,0	0/0:12,0:12:3.01:0,3,31	0/1:18,3:21:17.02:239,0,17	1/1:8,1:9:3.90:87,4,0	./.	1/1:2,1:3:3.01:86,3,0	./.	1/1:15,1:16:3.01:62,3,0	./.	1/1:12,1:13:7.10:101,7,0	./.	./.	1/1:6,0:6:2.98:21,3,0	1/1:16,0:16:3:27,3,0	1/1:8,3:11:9.03:251,9,0	./.
chr10	82258620	.	GAGA	G	293.95	PASS	AC=20;AF=0.769;AN=26;BaseQRankSum=4.767;DP=44;FS=0.000;HRun=0;HaplotypeScore=79.4531;InbreedingCoeff=0.4286;MQ=118.07;MQ0=8;MQRankSum=-3.742;QD=21.00;ReadPosRankSum=4.767;VQSLOD=3.3959;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:0,1:1:2.68:0,3,11	./.	0/0:18,0:13:39.13:0,39,871	0/0:11,0:5:12:0,12,225	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:30,3,0	1/1:0,1:1:3:28,3,0	1/1:0,1:1:3.01:30,3,0	1/1:0,1:1:3.01:30,3,0	./.	1/1:0,3:3:9.02:90,9,0	1/1:0,1:1:3.01:30,3,0	./.	1/1:0,1:1:3.01:32,3,0	./.	1/1:0,1:1:2.37:8,2,0	./.	1/1:0,1:1:3.01:30,3,0	./.	./.	./.	./.	1/1:0,3:3:9.02:90,9,0	./.
chr10	82258628	.	TCC	T	109.81	PASS	AC=20;AF=0.769;AN=26;BaseQRankSum=4.517;DP=46;FS=0.000;HRun=2;HaplotypeScore=77.3545;InbreedingCoeff=0.4216;MQ=80.22;MQ0=13;MQRankSum=-3.993;QD=7.84;ReadPosRankSum=4.517;VQSLOD=0.4775;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:1.25:3,1,0	./.	0/0:19,0:11:33.07:0,33,557	0/0:11,0:4:9.03:0,9,183	./.	./.	./.	./.	./.	1/1:0,1:1:2.90:16,3,0	1/1:0,1:1:2.88:15,3,0	1/1:0,1:1:2.90:16,3,0	1/1:0,1:1:2.90:16,3,0	./.	1/1:0,3:3:8.71:48,9,0	1/1:0,1:1:2.90:16,3,0	./.	1/1:0,1:1:2.92:17,3,0	./.	0/0:0,1:1:1.25:0,1,3	./.	1/1:0,1:1:2.90:16,3,0	./.	./.	./.	./.	1/1:0,3:3:8.73:49,9,0	./.
chr10	82258631	.	TGCAACATATAAATATC	T	1472.76	PASS	AC=22;AF=0.846;AN=26;BaseQRankSum=4.468;DP=44;FS=0.000;HRun=0;HaplotypeScore=84.6043;InbreedingCoeff=0.3674;MQ=58.51;MQ0=13;MQRankSum=-3.823;QD=98.18;ReadPosRankSum=4.468;VQSLOD=2.7908;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:3:29,3,0	./.	0/0:17,0:9:27.09:0,27,1669	0/0:11,0:4:12.04:0,12,671	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:112,3,0	1/1:0,1:1:3.01:112,3,0	1/1:0,1:1:3.01:112,3,0	1/1:0,1:1:3.01:112,3,0	./.	1/1:0,3:3:9.03:336,9,0	1/1:0,1:1:3.01:112,3,0	./.	1/1:0,1:1:3.01:113,3,0	./.	1/1:0,1:1:3.01:90,3,0	./.	1/1:0,1:1:3.01:112,3,0	./.	./.	./.	./.	1/1:0,3:3:9.03:336,9,0	./.
chr10	82258650	.	CCAATTAAGCGATCCTTCA	C	2013.92	PASS	AC=22;AF=0.846;AN=26;BaseQRankSum=5.182;DP=53;FS=4.987;HRun=0;HaplotypeScore=96.9193;InbreedingCoeff=0.3821;MQ=117.67;MQ0=11;MQRankSum=-4.345;QD=134.26;ReadPosRankSum=5.182;VQSLOD=3.3264;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:3.01:65,3,0	./.	0/0:19,0:12:36.12:0,36,2581	0/0:18,0:12:36.12:0,36,2704	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:150,3,0	1/1:0,1:1:3.01:147,3,0	1/1:0,1:1:3.01:148,3,0	1/1:0,1:1:3.01:148,3,0	./.	1/1:0,3:3:9.03:444,9,0	1/1:0,1:1:3.01:148,3,0	./.	1/1:0,1:1:3.01:148,3,0	./.	1/1:0,1:1:3.01:127,3,0	./.	1/1:0,1:1:3.01:148,3,0	./.	./.	./.	./.	1/1:0,3:3:9.03:445,9,0	./.
chr10	82258667	.	CA	C	950.78	PASS	AC=38;AF=0.905;AN=42;BaseQRankSum=4.266;DP=74;FS=13.966;HRun=1;HaplotypeScore=55.1506;InbreedingCoeff=0.3569;MQ=137.59;MQ0=0;MQRankSum=-5.698;QD=23.77;ReadPosRankSum=-0.596;VQSLOD=2.1557;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:3.01:41,3,0	1/1:1,0:1:3.01:34,3,0	0/0:16,0:16:48.08:0,48,718	0/0:17,0:16:48.16:0,48,757	./.	./.	./.	1/1:0,4:4:12.03:150,12,0	./.	1/1:1,0:1:3:28,3,0	1/1:1,0:1:3:27,3,0	1/1:3,0:3:8.88:70,9,0	1/1:4,0:4:11.93:90,12,0	./.	1/1:3,0:3:9:81,9,0	1/1:2,0:2:5.99:50,6,0	1/1:2,0:2:2.88:15,3,0	1/1:1,0:1:3:28,3,0	./.	1/1:1,0:1:2.04:6,2,0	1/1:1,0:1:3:28,3,0	1/1:1,4:5:12.02:128,12,0	1/1:1,0:1:3.01:41,3,0	1/1:2,0:2:6.02:71,6,0	./.	1/1:1,0:1:3.01:37,3,0	1/1:3,0:3:9:82,9,0	1/1:2,0:2:5.99:61,6,0
chr10	82258886	.	CG	C	6294.38	PASS	AB=1.000;AC=53;AF=0.981;AN=54;BaseQRankSum=-1.164;DP=254;FS=3.711;HRun=2;HaplotypeScore=32.7615;InbreedingCoeff=0.2307;MQ=43.76;MQ0=12;MQRankSum=-0.779;QD=25.08;ReadPosRankSum=0.119;VQSLOD=4.4256;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:3:5.99:50,6,0	1/1:1,5:6:14.99:167,15,0	0/1:3,0:2:0.01:0,0,0	./.	1/1:0,11:11:20.89:208,21,0	1/1:3,6:9:24.02:272,24,0	1/1:2,11:11:21.07:263,21,0	1/1:3,8:10:26.98:289,27,0	1/1:0,9:9:24.07:304,24,0	1/1:2,12:14:36.10:442,36,0	1/1:1,10:10:26.98:302,27,0	1/1:2,8:9:15.01:170,15,0	1/1:5,8:13:33.05:369,33,0	1/1:0,3:3:6.02:77,6,0	1/1:6,3:9:18.02:180,18,0	1/1:0,1:1:2.98:21,3,0	1/1:1,5:6:6.02:77,6,0	1/1:4,2:5:14.99:160,15,0	1/1:7,14:18:41.87:512,42,0	1/1:2,3:5:12.02:130,12,0	1/1:8,0:6:11.97:98,12,0	1/1:0,10:10:20.98:229,21,0	1/1:7,13:20:56.19:607,56,0	1/1:1,4:4:3.01:38,3,0	1/1:3,7:10:27.02:297,27,0	1/1:5,9:14:42.07:482,42,0	1/1:0,7:7:18.06:229,18,0	1/1:6,6:10:30.01:322,30,0
chr10	82258887	.	GGA	G	1647.27	PASS	AB=0.972;AC=46;AF=0.821;AN=56;BaseQRankSum=3.250;DP=267;FS=1.090;HRun=0;HaplotypeScore=54.0576;InbreedingCoeff=0.1489;MQ=42.97;MQ0=12;MQRankSum=0.951;QD=6.41;ReadPosRankSum=5.503;VQSLOD=2.2698;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:2:5.99:50,6,0	1/1:6,0:6:9.39:35,9,0	0/0:4,0:2:0.47:0,0,1	0/0:4,0:1:0:0,0,0	1/1:12,0:12:0.25:56,0,0	1/1:9,0:9:16.87:73,17,0	1/1:12,0:10:12.67:34,13,0	0/1:13,1:13:44.63:88,0,45	1/1:10,0:10:14.70:39,15,0	1/1:14,0:14:5.27:57,5,0	1/1:11,0:10:18.92:73,19,0	1/1:10,0:10:10:44,10,0	1/1:12,0:12:21.73:105,22,0	1/1:3,0:3:3.85:10,4,0	1/1:11,0:11:13.67:93,14,0	0/0:2,0:2:2.29:0,2,19	1/1:5,0:5:3.85:11,4,0	1/1:6,1:6:11.89:86,12,0	0/1:20,1:18:6.35:104,0,6	0/1:6,0:6:7.88:51,0,8	1/1:7,0:5:11.97:98,12,0	1/1:10,0:10:14.81:63,15,0	1/1:20,1:21:36.28:228,36,0	1/1:5,0:4:1.82:5,2,0	1/1:11,0:11:21.04:125,21,0	1/1:15,0:15:10.62:138,11,0	0/1:8,0:8:5.89:16,0,6	1/1:13,0:11:1.65:78,2,0
chr10	82261142	.	ACC	A	2266.62	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=6.602;DP=403;FS=0.000;HRun=10;HaplotypeScore=60.6277;InbreedingCoeff=0.9029;MQ=55.65;MQ0=20;MQRankSum=3.711;QD=23.37;ReadPosRankSum=0.890;VQSLOD=2.8609;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:44.93:0,45,436	0/0:3,0:2:6.02:0,6,95	0/0:13,0:7:13.60:0,14,107	0/0:10,0:6:3.63:0,4,39	0/0:12,0:14:37.98:0,38,529	0/0:13,0:13:24.08:0,24,360	0/0:12,0:11:20.95:0,21,214	1/1:6,21:26:61.88:699,62,0	0/0:15,0:13:33.07:0,33,482	0/0:5,0:5:15.05:0,15,238	0/0:17,0:16:42.12:0,42,621	0/0:13,0:13:24.08:0,24,366	0/0:10,0:11:30.10:0,30,457	0/0:8,0:8:12.04:0,12,179	0/0:9,0:10:26.57:0,27,362	0/0:5,0:5:15.05:0,15,214	0/0:26,0:25:54.18:0,54,833	0/0:25,0:20:50.65:0,51,748	1/1:9,11:19:35.78:366,36,0	1/1:3,25:28:69.18:760,69,0	0/0:17,0:15:36.10:0,36,544	0/0:11,0:11:30.10:0,30,464	0/0:14,0:14:33.41:0,33,530	0/0:14,0:13:20.67:0,21,309	0/0:17,0:17:44.94:0,45,581	0/0:11,0:10:18.05:0,18,233	1/1:2,20:21:54.13:600,54,0	./.
chr10	82261279	.	C	CAA	3138.97	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-3.608;DP=530;FS=1.945;HRun=11;HaplotypeScore=71.7585;InbreedingCoeff=0.9718;MQ=75.20;MQ0=1;MQRankSum=2.322;QD=27.53;ReadPosRankSum=-4.418;VQSLOD=2.7695;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:62.80:0,63,594	0/0:10,0:10:24.01:0,24,226	0/0:7,0:8:17.45:0,17,126	0/0:19,0:19:9.28:0,9,195	0/0:31,0:35:65.64:0,66,719	0/0:13,0:13:36.06:0,36,349	0/0:2,0:11:21.95:0,22,95	1/1:5,17:23:55.15:714,55,0	0/0:16,0:16:42.06:0,42,406	0/0:25,0:26:62.82:0,63,592	0/0:18,0:18:51.08:0,51,495	0/0:15,0:15:42.02:0,42,401	0/0:16,0:16:14.31:0,14,324	0/0:10,0:10:21.01:0,21,204	0/0:19,0:19:45.05:0,45,434	0/0:10,0:11:32.79:0,33,302	0/0:19,0:20:36.40:0,36,394	0/0:21,0:22:41.86:0,42,457	1/1:3,17:23:54.14:727,54,0	1/1:7,27:37:89.50:1076,89,0	0/0:11,0:11:27:0,27,262	0/0:21,0:21:57.07:0,57,552	0/0:17,0:18:38.74:0,39,360	0/0:7,0:7:17.96:0,18,163	0/0:20,0:22:56.52:0,57,518	0/0:27,0:29:62.72:0,63,660	1/1:5,26:31:54.18:782,54,0	0/0:12,0:13:29.75:0,30,274
chr10	82261746	.	A	ATACTGGAATC	70552.41	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.761;DP=609;FS=0.000;HRun=0;HaplotypeScore=146.8226;InbreedingCoeff=0.9799;MQ=64.06;MQ0=0;MQRankSum=-8.644;QD=122.06;ReadPosRankSum=3.568;VQSLOD=5.2990;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,12:21:45.15:2233,45,0	1/1:6,7:15:36.12:1789,36,0	0/0:18,0:18:48.13:0,48,1373	0/0:13,0:13:36.12:0,36,979	1/1:15,23:42:99:4565,99,0	1/1:2,21:26:66.23:3477,66,0	1/1:11,12:23:66.23:2948,66,0	1/1:17,5:27:78.24:3350,78,0	1/1:3,9:14:36.12:1909,36,0	1/1:16,15:33:87.30:3916,87,0	1/1:8,13:24:57.20:2454,57,0	1/1:6,17:25:69.24:3313,69,0	1/1:2,13:17:42.14:2151,42,0	1/1:8,12:24:57.20:2585,57,0	1/1:10,14:27:72.25:3389,72,0	1/1:6,9:16:45.15:2176,45,0	1/1:7,9:20:48.16:2231,48,0	1/1:6,7:14:35.15:1779,35,0	1/1:10,8:18:51.18:2237,51,0	1/1:9,20:30:81.28:3768,81,0	1/1:4,1:8:12.04:528,12,0	1/1:5,18:26:66.23:3325,66,0	1/1:7,22:30:81.28:4059,81,0	1/1:6,4:11:20.76:888,21,0	1/1:8,19:28:78.27:3714,78,0	1/1:12,17:31:93.32:4217,93,0	1/1:10,8:21:54.19:2446,54,0	1/1:2,4:7:21.07:1102,21,0
chr10	82262037	.	AG	A	5917.69	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-1.317;DP=862;FS=1.007;HRun=3;HaplotypeScore=133.4206;InbreedingCoeff=0.9997;MQ=86.58;MQ0=0;MQRankSum=-1.102;QD=32.88;ReadPosRankSum=-0.806;VQSLOD=3.6707;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,61:63:99:1971,159,0	0/0:9,0:9:26.98:0,27,323	0/0:33,0:33:93.01:0,93,1251	0/0:26,0:26:71.89:0,72,977	0/0:36,0:36:99:0,99,1415	0/0:24,0:24:72.23:0,72,1019	0/0:31,0:31:84.25:0,84,1165	1/1:1,26:27:78.22:941,78,0	0/0:27,0:27:78.21:0,78,1064	0/0:32,0:32:87.28:0,87,1218	0/0:16,0:16:48.16:0,48,687	0/0:48,0:48:99:0,144,2072	0/0:29,0:29:87.29:0,87,1251	0/0:34,0:34:99:0,99,1425	0/0:61,0:60:99:0,175,2484	0/0:24,0:24:69.22:0,69,975	0/0:27,0:27:81.25:0,81,1144	0/0:18,0:18:54.10:0,54,716	1/1:5,27:32:84.22:999,84,0	1/1:0,25:25:72.16:871,72,0	0/0:41,0:41:99:0,120,1689	0/0:31,0:31:93.30:0,93,1316	0/0:25,0:25:69.15:0,69,964	0/0:27,0:27:81.26:0,81,1145	0/0:38,0:38:99:0,114,1569	0/0:32,0:32:96.31:0,96,1366	1/1:0,33:33:93.25:1135,93,0	0/0:13,0:13:39.13:0,39,561
chr10	82262792	.	A	AT	10556.47	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-12.112;DP=559;FS=2.719;HRun=2;HaplotypeScore=62.5816;InbreedingCoeff=0.9209;MQ=71.78;MQ0=2;MQRankSum=0.627;QD=25.38;ReadPosRankSum=3.875;VQSLOD=4.7990;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:2.68:3,0,172	1/1:1,9:10:24.07:316,24,0	0/0:21,0:19:16.81:0,17,214	0/0:11,0:6:11.05:0,11,131	1/1:5,22:27:68.19:772,68,0	1/1:5,22:27:48.79:664,49,0	0/0:17,0:17:41.96:0,42,350	1/1:6,24:30:41.97:724,42,0	1/1:1,12:13:27.09:372,27,0	1/1:2,21:23:63.06:729,63,0	1/1:1,21:22:62.97:749,63,0	1/1:0,14:14:30.10:413,30,0	0/0:13,0:13:39.04:0,39,424	0/0:10,0:10:29.99:0,30,310	1/1:0,13:13:27.09:372,27,0	1/1:2,15:17:28.91:377,29,0	1/1:4,24:28:37.98:668,38,0	1/1:1,15:16:39.13:525,39,0	1/1:3,17:20:39.06:568,39,0	1/1:4,30:34:87.87:1061,88,0	1/1:1,9:10:9.03:124,9,0	0/0:13,0:13:33.04:0,33,346	1/1:3,20:23:28.63:613,29,0	1/1:0,8:8:18.06:248,18,0	1/1:2,28:31:54.15:723,54,0	0/0:37,0:37:83.91:0,84,870	1/1:3,22:26:11.38:536,11,0	0/0:20,0:20:53.85:0,54,433
chr10	82262794	.	TA	T	1050.99	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-8.868;DP=567;FS=4.053;HRun=12;HaplotypeScore=96.3991;InbreedingCoeff=0.8092;MQ=71.75;MQ0=2;MQRankSum=0.197;QD=10.72;ReadPosRankSum=0.583;VQSLOD=3.3443;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:24:28.78:0,29,168	0/0:9,0:10:23.54:0,24,148	0/1:24,0:20:10.63:11,0,172	0/0:12,0:7:14.68:0,15,119	0/0:26,0:27:66.21:0,66,425	0/0:27,0:27:61.85:0,62,398	1/1:4,13:17:32.85:255,33,0	0/0:30,0:32:64.80:0,65,454	0/0:13,0:13:29.61:0,30,200	0/0:22,0:22:50.44:0,50,362	0/0:21,0:21:54.01:0,54,338	0/0:14,0:14:29.56:0,30,187	0/0:12,1:13:9.84:0,10,281	0/0:10,0:10:30.05:0,30,299	0/0:14,0:14:29.60:0,30,193	0/0:17,0:17:32.41:0,32,212	0/0:28,0:29:62.07:0,62,410	0/0:15,0:16:38.26:0,38,238	0/0:21,0:21:37.60:0,38,255	0/0:34,0:34:89.69:0,90,610	0/0:10,0:10:11.86:0,12,80	0/0:13,1:14:12.03:0,12,277	0/0:23,0:23:50.35:0,50,343	0/0:8,0:8:17.72:0,18,113	0/0:31,0:31:59.13:0,59,384	1/1:7,29:37:31.73:607,32,0	0/0:26,0:27:46.97:0,47,307	1/1:5,15:20:41.79:325,42,0
chr10	82263216	.	C	CGTGTGTGT	4537.69	PASS	AB=0.915;AC=40;AF=0.769;AN=52;BaseQRankSum=-3.030;DP=544;FS=2.243;HRun=0;HaplotypeScore=162.1606;InbreedingCoeff=0.1368;MQ=70.02;MQ0=9;MQRankSum=-1.811;QD=10.24;ReadPosRankSum=-1.492;VQSLOD=3.9220;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:3.11:34,0,3	1/1:12,0:11:6.02:201,6,0	./.	./.	1/1:13,2:17:3.01:40,3,0	1/1:19,0:20:9.03:183,9,0	0/1:18,0:18:6.66:7,0,140	0/0:19,0:17:0:0,0,0	1/1:18,0:17:12.01:328,12,0	1/1:26,0:26:25.90:533,26,0	1/1:19,0:18:6.02:75,6,0	1/1:20,0:19:14.66:373,15,0	0/1:6,0:11:6.79:93,0,7	0/1:9,0:10:9.80:26,0,10	1/1:20,0:18:12.04:258,12,0	1/1:18,0:18:11.63:382,12,0	1/1:16,0:16:7.58:219,8,0	1/1:12,0:11:15:249,15,0	0/0:12,0:12:2.22:0,2,7	0/1:16,0:16:20.92:21,0,128	1/1:29,0:27:15.38:148,15,0	1/1:17,0:17:9.03:166,9,0	0/1:19,0:21:75.66:178,0,76	1/1:32,0:32:12.01:256,12,0	1/1:19,0:17:3.01:67,3,0	1/1:27,0:27:33.10:580,33,0	0/0:11,0:11:15.05:0,15,242	1/1:7,3:12:3.01:122,3,0
chr10	82263255	.	GT	G	497.69	PASS	AB=0.964;AC=8;AF=0.143;AN=56;BaseQRankSum=2.784;DP=522;FS=3.270;HRun=1;HaplotypeScore=98.3054;InbreedingCoeff=0.0327;MQ=56.50;MQ0=26;MQRankSum=2.908;QD=4.15;ReadPosRankSum=-0.595;VQSLOD=0.1339;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:11.68:0,12,125	0/0:12,0:11:12.13:0,12,92	0/0:28,0:14:42.13:0,42,519	0/0:33,0:17:51.15:0,51,618	0/1:16,0:16:28.69:29,0,32	0/0:18,0:18:1.96:0,2,78	0/0:19,0:19:47.87:0,48,616	0/1:17,0:16:44.26:74,0,44	0/0:16,0:15:5.82:0,6,47	0/1:21,0:21:34.57:35,0,265	0/0:19,0:18:4.25:0,4,65	0/0:23,0:22:18:0,18,191	0/0:7,0:7:6.01:0,6,58	0/0:18,0:18:35.96:0,36,430	0/0:17,0:15:1.25:0,1,42	0/0:18,0:18:14.73:0,15,207	0/0:17,0:17:8.93:0,9,77	0/0:14,0:13:18.05:0,18,237	0/1:12,1:10:7.85:101,0,8	1/1:10,3:13:14.61:190,15,0	0/1:22,0:20:6.03:6,0,285	0/0:16,0:16:45.14:0,45,547	0/0:21,0:21:2.09:0,2,281	0/0:27,0:27:5.50:0,5,88	0/0:17,0:16:2.98:0,3,22	0/0:19,0:18:47.99:0,48,605	0/1:15,3:17:12.68:196,0,13	0/0:14,0:14:30.09:0,30,356
chr10	82263259	.	G	GGT	5425.26	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=1.656;DP=542;FS=19.173;HRun=0;HaplotypeScore=91.8454;InbreedingCoeff=0.8173;MQ=63.26;MQ0=24;MQRankSum=-1.893;QD=14.24;ReadPosRankSum=2.261;VQSLOD=3.1277;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,1:30:5.97:72,6,0	1/1:3,0:11:14.25:119,14,0	0/0:31,0:17:50.82:0,51,620	0/0:35,0:20:47.88:0,48,659	1/1:12,1:14:24.08:373,24,0	1/1:2,0:22:9.03:117,9,0	0/0:18,0:18:44.90:0,45,581	1/1:18,0:17:39.13:624,39,0	1/1:2,14:17:3.48:52,3,0	1/1:6,13:19:39.13:619,39,0	1/1:6,11:18:6.02:70,6,0	1/1:5,1:24:9.03:121,9,0	0/0:7,0:7:1.96:0,2,6	0/0:19,0:19:27.54:0,28,449	1/1:6,8:15:12.04:142,12,0	1/1:4,0:18:8.70:120,9,0	1/1:1,0:21:6.49:78,6,0	1/1:3,10:13:8.62:113,9,0	1/1:8,10:16:39.13:581,39,0	1/1:14,0:14:36.07:456,36,0	1/1:17,0:18:26.96:412,27,0	0/0:19,0:19:44.75:0,45,542	1/1:14,4:21:42.03:579,42,0	1/1:4,20:26:12.51:156,13,0	1/1:4,0:17:2.37:8,2,0	0/0:20,0:19:34.33:0,34,385	1/1:18,0:17:48.02:612,48,0	0/0:12,0:12:29.53:0,30,314
chr10	82264281	.	G	GTTTT	9747.98	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=6.795;DP=480;FS=6.809;HRun=7;HaplotypeScore=98.4066;InbreedingCoeff=0.9880;MQ=87.25;MQ0=1;MQRankSum=-6.770;QD=27.77;ReadPosRankSum=-0.674;VQSLOD=1.7209;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:33:72.19:885,72,0	1/1:0,0:7:18.04:212,18,0	0/0:21,0:21:53.86:0,54,737	0/0:18,0:17:24.75:0,25,398	1/1:5,1:16:36.02:443,36,0	1/1:2,1:27:65.98:794,66,0	0/0:20,0:20:51.16:0,51,798	1/1:4,0:18:48.13:624,48,0	1/1:0,0:17:42.02:476,42,0	1/1:6,0:20:35.58:445,36,0	1/1:1,0:15:39:441,39,0	1/1:4,10:14:24.08:601,24,0	0/0:10,0:10:24.08:0,24,375	0/0:19,0:19:51.15:0,51,796	1/1:1,0:10:27.04:321,27,0	1/1:1,1:11:33.04:431,33,0	1/1:4,1:21:45.53:582,46,0	1/1:3,0:29:66.13:812,66,0	1/1:1,0:13:36.09:492,36,0	1/1:2,0:17:42.01:481,42,0	1/1:7,0:18:30.01:341,30,0	0/0:18,0:18:48.15:0,48,751	1/1:2,0:24:47.98:532,48,0	1/1:0,1:13:24.08:339,24,0	1/1:5,0:16:29.92:308,30,0	0/0:19,0:19:15.68:0,16,689	1/1:6,0:12:17.94:189,18,0	0/0:4,0:4:12.01:0,12,163
chr10	82265632	.	TCC	T	3004.74	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.090;DP=534;FS=0.888;HRun=10;HaplotypeScore=72.0933;InbreedingCoeff=0.9964;MQ=81.43;MQ0=1;MQRankSum=-3.676;QD=25.46;ReadPosRankSum=1.540;VQSLOD=3.6079;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,31:36:84.21:936,84,0	0/0:6,0:6:18.06:0,18,284	0/0:19,0:18:38.29:0,38,498	0/0:21,0:22:38.40:0,38,428	0/0:20,0:20:45.12:0,45,645	0/0:19,0:19:51.16:0,51,787	0/0:5,0:31:65.89:0,66,274	1/1:6,19:25:51.08:549,51,0	0/0:16,0:16:39.12:0,39,595	0/0:16,0:16:42.14:0,42,667	0/0:11,0:11:27.08:0,27,400	0/0:18,0:18:48.15:0,48,737	0/0:2,0:14:21.03:0,21,201	0/0:4,0:13:30.03:0,30,306	0/0:15,0:15:42.13:0,42,646	0/0:25,0:25:69.21:0,69,1049	0/0:17,0:17:45.15:0,45,714	0/0:10,0:11:30.08:0,30,433	1/1:0,10:10:30.06:324,30,0	1/1:0,25:25:66.16:736,66,0	0/0:12,0:28:45.03:0,45,454	0/0:4,0:16:33.05:0,33,330	0/0:17,0:17:35.55:0,36,481	0/0:15,0:16:44.62:0,45,650	0/0:27,0:27:69.22:0,69,1031	0/0:19,0:19:48.16:0,48,759	1/1:1,21:22:57.14:635,57,0	0/0:18,0:19:47.59:0,48,661
chr10	82266557	.	GCCGT	G	11954	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=5.956;DP=774;FS=0.000;HRun=0;HaplotypeScore=147.5409;InbreedingCoeff=0.9999;MQ=85.63;MQ0=0;MQRankSum=-7.910;QD=48.01;ReadPosRankSum=-2.075;VQSLOD=4.9977;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,148,3911	0/0:14,0:14:39.13:0,39,1003	0/0:25,0:25:60.24:0,60,1749	0/0:27,0:27:69.24:0,69,1703	0/0:21,0:21:63.22:0,63,1647	0/0:15,0:15:45.15:0,45,1200	1/1:1,24:25:72.20:1307,72,0	1/1:1,29:30:84.09:1488,84,0	0/0:33,0:33:84.29:0,84,2239	0/0:30,0:30:78.27:0,78,2050	0/0:25,0:25:72.23:0,72,1834	0/0:39,0:39:99:0,111,2898	1/1:2,28:30:81.28:1511,81,0	1/1:1,22:23:51.09:880,51,0	0/0:35,0:35:99:0,99,2551	0/0:34,0:34:99:0,99,2556	0/0:37,0:37:99:0,108,2847	0/0:30,0:30:90.31:0,90,2357	1/1:2,20:22:60.18:1065,60,0	1/1:1,26:27:66.18:1193,66,0	0/0:30,0:30:84.29:0,84,2197	1/1:1,23:24:63.17:1139,63,0	0/0:20,0:20:54.19:0,54,1439	0/0:35,0:35:99:0,99,2638	0/0:24,0:24:72.25:0,72,1918	1/1:1,24:25:72.21:1301,72,0	1/1:1,30:31:78.07:1455,78,0	1/1:0,12:12:33.11:616,33,0
chr10	82267561	.	T	TA	1157.19	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.071;DP=553;FS=7.724;HRun=7;HaplotypeScore=81.7583;InbreedingCoeff=0.9915;MQ=76.97;MQ0=0;MQRankSum=0.000;QD=26.30;ReadPosRankSum=1.608;VQSLOD=4.2734;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.09:0,69,659	0/0:8,0:8:23.97:0,24,216	0/0:17,0:17:30.02:0,30,282	0/0:9,0:8:14.94:0,15,130	0/0:18,0:18:51.06:0,51,486	0/0:29,0:29:81.09:0,81,773	0/0:16,0:16:48.03:0,48,445	0/0:34,0:34:86.47:0,86,745	0/0:20,0:20:54.09:0,54,521	0/0:19,0:19:54.09:0,54,520	0/0:16,0:16:36.06:0,36,347	0/0:13,0:13:39.05:0,39,372	1/1:2,13:15:36.11:433,36,0	1/1:1,16:17:39.12:469,39,0	0/0:25,0:25:48.56:0,49,581	0/0:18,0:18:51.07:0,51,487	0/0:21,0:21:63.07:0,63,596	0/0:15,0:15:39.06:0,39,376	0/0:22,0:22:57.06:0,57,539	0/0:34,0:34:98.49:0,98,913	0/0:8,0:8:21.03:0,21,203	1/1:1,11:12:33.10:397,33,0	0/0:22,0:22:66.09:0,66,631	0/0:13,0:13:33.03:0,33,312	0/0:34,0:34:96.08:0,96,907	0/0:28,0:28:75.12:0,75,724	0/0:24,0:24:60.55:0,61,573	0/0:21,0:21:60.09:0,60,579
chr10	82268547	.	TCA	T	7636.64	PASS	AB=0.810;AC=38;AF=0.679;AN=56;BaseQRankSum=-0.966;DP=546;FS=3.951;HRun=0;HaplotypeScore=110.7162;InbreedingCoeff=0.7653;MQ=50.92;MQ0=8;MQRankSum=5.567;QD=19.00;ReadPosRankSum=4.688;VQSLOD=5.0879;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:21:25.42:0,25,259	1/1:2,8:10:18.05:212,18,0	0/1:12,1:4:17.06:17,0,82	0/0:12,0:3:3.01:0,3,43	1/1:3,13:16:39.11:458,39,0	1/1:3,12:15:30.09:353,30,0	0/0:24,1:25:18.84:0,19,760	1/1:9,0:18:11.36:57,11,0	0/1:10,7:17:14.43:299,0,14	1/1:18,17:35:51.15:600,51,0	1/1:10,12:21:36.09:412,36,0	1/1:7,12:19:41.93:452,42,0	0/0:10,0:10:5.98:0,6,48	0/0:10,0:17:23.99:0,24,208	1/1:6,24:29:72.16:826,72,0	1/1:6,8:14:32.93:367,33,0	1/1:9,13:22:45.13:530,45,0	1/1:3,8:11:24.07:283,24,0	1/1:5,0:10:11.36:56,11,0	1/1:9,0:26:11.36:56,11,0	1/1:2,21:23:54.16:636,54,0	0/0:11,0:11:9.84:0,10,76	1/1:6,16:23:44.81:528,45,0	1/1:1,15:16:45.13:530,45,0	1/1:10,23:30:63.19:742,63,0	0/0:17,1:24:47.95:0,48,448	1/1:2,0:23:45.45:223,45,0	0/0:13,0:19:20.99:0,21,220
chr10	82268599	.	G	GGT	7008.13	PASS	AB=0.754;AC=41;AF=0.759;AN=54;BaseQRankSum=-4.084;DP=627;FS=2.425;HRun=0;HaplotypeScore=135.9140;InbreedingCoeff=0.1367;MQ=53.54;MQ0=22;MQRankSum=-2.077;QD=13.35;ReadPosRankSum=1.608;VQSLOD=4.4972;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:16:5.71:41,6,0	1/1:1,2:3:6.02:92,6,0	0/0:38,0:11:0.18:0,0,1	0/0:36,0:11:8.50:0,8,87	1/1:14,17:29:8.90:559,9,0	1/1:9,6:14:21.04:295,21,0	0/0:13,0:23:25.38:0,25,135	1/1:29,0:29:5.63:30,6,0	1/1:12,9:20:29.93:428,30,0	1/1:22,9:32:8.08:555,8,0	1/1:9,8:17:27.08:395,27,0	0/1:13,7:20:47.31:209,0,47	1/1:5,0:11:9:78,9,0	1/1:15,0:20:17.28:136,17,0	1/1:14,13:27:11.12:609,11,0	1/1:6,14:22:16.97:611,17,0	0/1:8,11:19:0.95:427,0,1	0/1:4,8:13:6.97:341,0,7	1/1:18,0:17:8.92:66,9,0	0/1:18,0:21:22.04:66,0,22	0/1:32,9:40:23.54:604,0,24	1/1:3,0:12:17.43:85,17,0	0/1:16,0:15:54.68:55,0,84	1/1:10,16:25:1.75:441,2,0	0/1:14,13:27:16.95:635,0,17	1/1:22,0:27:12.98:54,13,0	1/1:19,0:27:24.11:195,24,0	./.
chr10	82270109	.	C	CCCAT	20515.53	PASS	AB=0.583;AC=35;AF=0.625;AN=56;BaseQRankSum=-12.321;DP=864;FS=6.853;HRun=0;HaplotypeScore=134.1880;InbreedingCoeff=0.9471;MQ=74.74;MQ0=7;MQRankSum=-6.166;QD=37.17;ReadPosRankSum=3.797;VQSLOD=5.0246;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:84.03:0,84,1130	1/1:2,9:11:27.09:655,27,0	0/0:37,0:29:30.08:0,30,444	0/0:38,0:35:40.40:0,40,614	1/1:12,12:25:33.07:727,33,0	1/1:13,20:33:45.13:1438,45,0	0/0:21,0:46:42.05:0,42,392	0/0:23,0:22:21.05:0,21,263	1/1:15,25:40:60.21:1455,60,0	0/1:6,14:20:2.41:729,0,2	1/1:8,11:19:27.09:655,27,0	1/1:4,35:42:90.31:2183,90,0	1/1:23,3:44:42.14:730,42,0	1/1:22,0:26:14.07:594,14,0	1/1:6,24:32:51.17:1238,51,0	1/1:11,22:35:60.21:1435,60,0	1/1:4,22:28:42.14:1019,42,0	1/1:9,21:30:54.19:1311,54,0	0/0:23,0:23:32.96:0,33,456	0/0:23,0:23:63.15:0,63,923	1/1:19,34:54:84.29:2027,84,0	1/1:4,4:20:29.13:478,29,0	1/1:7,21:28:51.06:1237,51,0	1/1:9,29:39:78.27:1893,78,0	1/1:3,14:18:30.10:711,30,0	0/0:30,0:30:38.21:0,38,930	0/0:30,0:30:60.20:0,60,961	0/0:19,0:19:42.14:0,42,672
chr10	82270209	.	G	GCCT	3127.21	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=9.426;DP=665;FS=0.532;HRun=0;HaplotypeScore=100.3431;InbreedingCoeff=0.8696;MQ=72.26;MQ0=1;MQRankSum=-2.122;QD=33.27;ReadPosRankSum=2.098;VQSLOD=3.8452;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,108,1593	0/0:12,0:12:33.08:0,33,467	0/1:18,0:16:3.87:4,0,264	0/0:14,0:12:12.04:0,12,178	0/0:17,0:17:48.16:0,48,712	0/0:22,0:22:60.20:0,60,890	0/0:29,0:29:72.23:0,72,1048	0/0:28,0:28:57.19:0,57,845	0/0:28,0:28:66.21:0,66,958	0/0:35,0:35:81.25:0,81,1148	0/0:16,0:16:39.11:0,39,558	0/0:27,0:27:81.27:0,81,1201	1/1:6,26:33:75.26:1532,75,0	1/1:5,17:21:45.15:937,45,0	0/0:22,0:22:51.17:0,51,756	0/0:29,0:29:72.23:0,72,1049	0/0:27,0:27:72.24:0,72,1068	0/0:18,0:18:51.17:0,51,753	0/0:17,0:17:45.15:0,45,668	0/0:26,0:26:57.18:0,57,825	0/0:24,0:24:57.19:0,57,846	1/1:5,15:21:39.13:799,39,0	0/0:21,0:21:54.18:0,54,801	0/0:33,0:33:66.15:0,66,911	0/0:16,0:16:42.14:0,42,623	0/0:27,0:27:66.22:0,66,979	0/0:29,0:29:78.22:0,78,1086	0/0:10,0:10:21.07:0,21,312
chr10	82271436	.	G	GA	459.60	PASS	AB=0.864;AC=8;AF=0.143;AN=56;BaseQRankSum=-2.459;DP=414;FS=1.929;HRun=11;HaplotypeScore=76.6029;InbreedingCoeff=0.0395;MQ=57.32;MQ0=6;MQRankSum=-1.366;QD=5.41;ReadPosRankSum=-1.045;VQSLOD=1.6304;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:86.63:0,87,673	0/1:9,1:10:3.56:4,0,159	0/0:9,0:5:14.86:0,15,109	0/0:8,0:7:16.93:0,17,116	0/0:24,1:24:6.93:0,7,230	0/1:6,1:7:9.51:10,0,120	0/0:10,1:10:23.90:0,24,186	0/0:32,0:32:70.70:0,71,540	0/1:12,0:12:15.35:15,0,115	0/0:13,1:14:1.45:0,1,184	0/0:25,0:26:52.75:0,53,401	0/0:8,0:9:16.96:0,17,122	0/0:7,0:6:17.93:0,18,139	0/0:7,0:8:10.97:0,11,75	0/1:9,2:11:33.98:34,0,136	0/0:4,0:4:5.97:0,6,46	0/0:25,0:27:66.77:0,67,494	0/0:13,1:14:2.46:0,2,203	0/0:8,0:8:14.91:0,15,114	0/0:25,0:25:56.68:0,57,441	0/0:7,0:8:16.95:0,17,121	0/0:14,0:17:32.98:0,33,226	0/0:13,0:13:26.71:0,27,208	0/0:11,0:11:20.69:0,21,162	0/0:7,0:8:13.98:0,14,100	0/1:9,12:20:4.14:318,0,4	0/1:9,1:11:10.50:11,0,102	1/1:6,7:13:0.81:190,1,0
chr10	82271498	.	GAT	G	2846.71	PASS	AC=34;AF=0.654;AN=52;BaseQRankSum=3.380;DP=319;FS=14.033;HRun=0;HaplotypeScore=88.4006;InbreedingCoeff=0.7489;MQ=67.94;MQ0=13;MQRankSum=-0.599;QD=18.37;ReadPosRankSum=4.498;VQSLOD=2.8345;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,3:17:18:184,18,0	1/1:2,4:6:1.82:5,2,0	0/0:14,0:9:18.06:0,18,294	0/0:29,0:16:20.89:0,21,326	1/1:3,7:9:2.55:42,3,0	1/1:5,3:8:21.05:303,21,0	1/1:4,4:8:12.03:151,12,0	0/0:48,0:44:99:0,129,2130	1/1:4,5:8:12.03:147,12,0	1/1:6,6:11:28.31:410,28,0	1/1:5,14:19:23.29:304,23,0	1/1:4,1:5:5.93:70,6,0	./.	0/0:3,0:3:1.25:0,1,3	1/1:3,1:4:9.03:149,9,0	1/1:2,1:3:4.24:27,4,0	1/1:11,5:15:16.01:322,16,0	1/1:9,5:13:25.20:320,25,0	0/0:14,0:12:33.07:0,33,492	0/0:20,0:20:57.19:0,57,984	1/1:2,1:3:9.02:122,9,0	./.	1/1:5,1:6:6.01:67,6,0	1/1:1,1:2:4.26:45,4,0	1/1:2,10:12:24.08:362,24,0	0/0:16,1:17:3.41:0,3,291	0/0:5,0:4:6.02:0,6,109	0/0:7,0:6:8.68:0,9,80
chr10	82271504	.	GAT	G	1434.53	PASS	AB=0.970;AC=24;AF=0.480;AN=50;BaseQRankSum=8.660;DP=304;FS=6.955;HRun=0;HaplotypeScore=90.0308;InbreedingCoeff=0.1143;MQ=66.21;MQ0=16;MQRankSum=-1.576;QD=9.20;ReadPosRankSum=8.537;VQSLOD=1.9068;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:18,1:18:45.04:45,0,51	0/0:6,0:6:2.74:0,3,18	0/0:13,0:8:15.05:0,15,272	0/0:27,0:15:20.37:0,20,291	0/0:10,0:9:2.98:0,3,22	1/1:8,0:8:0.16:119,0,0	1/1:7,0:7:8.99:76,9,0	0/0:44,0:40:99:0,107,1586	0/1:8,0:7:7.89:37,0,8	0/1:12,0:11:2.49:168,0,2	1/1:16,1:17:15.43:139,15,0	0/1:5,0:5:11.98:26,0,12	./.	1/1:0,3:3:1.82:5,2,0	1/1:3,0:3:8.99:83,9,0	0/1:2,1:3:11.12:13,0,11	0/1:17,0:15:28.88:113,0,29	0/1:15,0:13:20.62:182,0,21	0/0:13,0:11:30.02:0,30,423	0/0:19,0:19:48.14:0,48,750	0/1:3,0:3:7.88:43,0,8	./.	./.	0/1:2,0:2:12.89:15,0,13	1/1:12,0:12:23.83:183,24,0	1/1:15,0:15:38.79:310,39,0	0/0:4,0:3:6.02:0,6,98	0/1:7,0:6:15.94:40,0,16
chr10	82271506	.	TAG	T	3492.86	PASS	AB=1.000;AC=38;AF=0.760;AN=50;BaseQRankSum=4.392;DP=299;FS=11.935;HRun=0;HaplotypeScore=80.0795;InbreedingCoeff=0.5996;MQ=64.51;MQ0=18;MQRankSum=-1.396;QD=18.29;ReadPosRankSum=3.653;VQSLOD=3.2133;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,3:18:18.05:182,18,0	1/1:2,4:6:2.22:7,2,0	0/0:12,0:7:15.02:0,15,253	0/0:27,0:14:8.98:0,9,200	1/1:3,7:9:0.89:2,1,0	1/1:3,4:7:15.05:253,15,0	1/1:3,4:7:9.03:135,9,0	0/0:9,0:38:43.15:0,43,725	1/1:2,5:6:6.02:87,6,0	1/1:6,6:11:29.93:441,30,0	1/1:2,15:17:23.57:327,24,0	1/1:5,1:5:3.48:57,3,0	./.	0/1:3,0:3:0:0,0,0	1/1:2,1:3:9.03:158,9,0	1/1:1,1:2:2.88:15,3,0	1/1:14,5:16:12.88:258,13,0	1/1:10,5:13:18.35:297,18,0	0/0:13,0:11:11.15:0,11,197	0/1:19,0:19:22.96:23,0,312	1/1:2,1:3:8.39:109,8,0	./.	./.	1/1:1,1:2:4.83:51,5,0	1/1:3,10:13:24.08:386,24,0	1/1:2,13:15:42.09:612,42,0	0/0:4,0:3:5.98:0,6,49	1/1:1,5:5:6.02:92,6,0
chr10	82271508	.	G	GAT	2247.47	PASS	AB=1.000;AC=30;AF=0.652;AN=46;BaseQRankSum=5.962;DP=304;FS=4.179;HRun=0;HaplotypeScore=87.7508;InbreedingCoeff=0.6577;MQ=61.73;MQ0=19;MQRankSum=-0.197;QD=13.87;ReadPosRankSum=6.039;VQSLOD=3.2572;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:18:12.04:140,12,0	0/1:7,0:7:0:0,0,0	0/0:10,0:5:12.04:0,12,171	0/0:26,0:13:8.86:0,9,128	./.	1/1:6,2:8:15.05:233,15,0	1/1:5,2:7:9.03:148,9,0	0/0:38,0:34:94.72:0,95,639	1/1:8,0:7:6.02:89,6,0	1/1:9,3:11:28.33:355,28,0	1/1:19,0:19:24.01:293,24,0	1/1:5,1:5:5.05:54,5,0	./.	./.	1/1:1,2:3:9.03:137,9,0	1/1:2,0:2:1.25:3,1,0	1/1:14,6:17:10.97:224,11,0	1/1:12,5:15:17.92:268,18,0	0/0:13,0:11:15.70:0,16,147	0/0:18,0:18:41.56:0,42,291	1/1:1,1:2:6.02:88,6,0	./.	./.	1/1:2,0:2:3.01:39,3,0	1/1:12,3:15:24.08:324,24,0	0/1:15,0:15:15.15:15,0,32	0/0:4,0:3:5.96:0,6,43	0/0:6,0:5:3.85:0,4,11
chr10	82271511	.	A	ATG	1020.35	PASS	AB=1.000;AC=27;AF=0.587;AN=46;BaseQRankSum=7.091;DP=287;FS=3.157;HRun=0;HaplotypeScore=88.1541;InbreedingCoeff=0.7221;MQ=60.18;MQ0=22;MQRankSum=0.468;QD=7.39;ReadPosRankSum=6.374;VQSLOD=2.8856;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,9:15:12.04:243,12,0	0/1:6,0:6:0:0,0,0	0/0:8,0:5:12.04:0,12,196	0/0:23,0:11:5.35:0,5,141	./.	1/1:9,0:8:14.82:114,15,0	1/1:7,0:7:11.89:104,12,0	0/0:39,0:34:96.11:0,96,1306	1/1:7,0:6:5.91:45,6,0	1/1:11,0:10:4.05:96,4,0	1/1:19,0:19:18.83:100,19,0	1/1:5,0:4:5.03:29,5,0	./.	./.	1/1:3,0:3:8.78:61,9,0	0/0:2,0:2:1.25:0,1,3	1/1:18,0:15:10.68:102,11,0	1/1:18,0:16:9.80:126,10,0	0/0:13,0:10:29.82:0,30,380	0/0:14,0:14:42.14:0,42,614	1/1:3,0:3:5.79:37,6,0	./.	./.	1/1:1,0:1:2.84:14,3,0	1/1:15,0:15:22.48:117,22,0	0/0:15,0:15:22.48:0,22,252	0/0:4,0:3:6.02:0,6,89	0/0:6,0:5:5.49:0,5,34
chr10	82271526	.	TATAG	T	240.51	PASS	AB=0.822;AC=4;AF=0.087;AN=46;BaseQRankSum=3.300;DP=247;FS=5.208;HRun=0;HaplotypeScore=77.3869;InbreedingCoeff=0.0680;MQ=47.29;MQ0=30;MQRankSum=-3.831;QD=8.29;ReadPosRankSum=-0.034;VQSLOD=1.7855;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:17.79:0,18,216	0/0:6,0:6:3.01:0,3,41	0/0:5,0:2:6.02:0,6,80	0/0:10,0:5:2.98:0,3,22	./.	0/0:13,0:12:24.08:0,24,358	0/0:7,0:5:3.74:0,4,12	0/0:30,0:22:45.13:0,45,591	0/0:6,0:5:3.01:0,3,42	0/0:14,0:12:35.48:0,35,503	0/0:19,0:19:21.07:0,21,291	0/0:5,0:4:3.01:0,3,52	./.	./.	0/0:4,0:4:12.04:0,12,187	0/0:3,0:3:3.01:0,3,44	0/0:20,0:17:26.59:0,27,381	0/0:15,0:13:24.99:0,25,343	0/1:14,1:10:24.67:25,0,231	0/0:6,0:6:15.05:0,15,206	0/0:3,0:3:6.02:0,6,93	./.	./.	0/0:1,0:1:3.01:0,3,42	0/0:15,0:15:24.08:0,24,344	0/1:7,5:12:31.99:261,0,32	0/0:3,0:2:3.01:0,3,41	1/1:1,1:1:3.01:51,3,0
chr10	82271550	.	TATA	T	85.01	PASS	AB=0.813;AC=3;AF=0.071;AN=42;BaseQRankSum=3.469;DP=204;FS=12.453;HRun=0;HaplotypeScore=50.6926;InbreedingCoeff=0.2251;MQ=40.76;MQ0=37;MQRankSum=-2.730;QD=5.00;ReadPosRankSum=0.485;VQSLOD=0.3954;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:11:14.99:0,15,167	0/0:6,0:6:8.82:0,9,138	./.	./.	./.	0/0:14,0:13:26.89:0,27,425	0/0:6,0:2:1.55:0,2,4	0/0:25,0:6:12.04:0,12,173	./.	0/0:15,0:13:39.11:0,39,643	0/0:12,0:12:11.72:0,12,97	0/0:4,0:3:6.02:0,6,92	./.	./.	0/0:5,0:5:14.94:0,15,214	0/0:4,0:4:6.02:0,6,97	0/0:19,0:16:29.04:0,29,420	0/0:18,0:16:38.03:0,38,553	0/0:12,0:8:24.05:0,24,341	0/0:2,0:2:6.02:0,6,100	0/0:2,0:2:2.90:0,3,16	0/0:2,0:2:6.02:0,6,92	./.	0/0:1,0:1:2.90:0,3,16	0/0:13,0:13:20.79:0,21,244	0/1:10,3:13:99:122,0,216	0/0:4,0:3:6.02:0,6,86	1/1:3,1:3:3.01:50,3,0
chr10	82271556	.	TATAG	T	282.80	PASS	AC=2;AF=0.050;AN=40;BaseQRankSum=3.242;DP=198;FS=1.460;HRun=0;HaplotypeScore=48.0272;InbreedingCoeff=0.3393;MQ=39.79;MQ0=38;MQRankSum=-3.905;QD=23.57;ReadPosRankSum=2.501;VQSLOD=3.3538;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:10:5.97:0,6,82	0/0:6,0:6:9.03:0,9,124	./.	./.	./.	0/0:16,0:15:33.11:0,33,463	0/0:6,0:2:0.47:0,0,1	0/0:25,0:4:5.91:0,6,39	./.	0/0:15,0:13:31.02:0,31,426	0/0:10,0:10:3.48:0,3,41	0/0:5,0:4:9.03:0,9,124	./.	0/0:1,0:1:3.01:0,3,40	0/0:5,0:5:15.05:0,15,216	0/0:4,0:4:6.02:0,6,85	0/0:19,0:16:26.95:0,27,354	0/0:18,0:16:39.92:0,40,511	0/0:11,0:8:24.08:0,24,329	0/0:1,0:1:3.01:0,3,41	./.	0/0:2,0:2:6.02:0,6,82	./.	./.	0/0:11,0:10:9.47:0,9,124	1/1:7,5:12:4.26:359,4,0	0/0:4,0:3:6.02:0,6,82	0/0:3,2:4:0.47:0,0,1
chr10	82271580	.	TATA	T	556.92	PASS	AB=1.000;AC=5;AF=0.104;AN=48;BaseQRankSum=5.177;DP=241;FS=3.853;HRun=0;HaplotypeScore=43.3181;InbreedingCoeff=0.3828;MQ=74.52;MQ0=30;MQRankSum=-2.638;QD=20.63;ReadPosRankSum=0.091;VQSLOD=2.9220;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:21.02:0,21,322	0/0:6,0:6:8.82:0,9,138	0/1:7,0:6:11.98:12,0,36	0/0:18,0:11:2.60:0,3,42	0/0:5,0:4:3.01:0,3,46	0/0:16,0:15:36.12:0,36,553	./.	0/0:31,0:17:51.17:0,51,783	0/0:6,0:5:12.04:0,12,182	0/0:10,0:8:24.08:0,24,390	0/0:7,0:7:3.01:0,3,46	0/0:6,0:5:12.04:0,12,184	0/0:7,0:5:12.04:0,12,184	0/0:2,0:2:3.01:0,3,46	0/0:6,0:6:18.06:0,18,276	0/0:4,0:4:9.03:0,9,143	0/0:19,0:16:30.10:0,30,465	0/0:16,0:16:41.16:0,41,628	0/0:10,0:8:8.08:0,8,264	0/0:2,0:2:6.02:0,6,90	./.	0/0:2,0:2:6.02:0,6,92	./.	./.	0/0:9,0:8:9.03:0,9,138	1/1:2,10:11:33.11:601,33,0	0/0:11,0:10:27.09:0,27,412	1/1:1,7:7:3.01:56,3,0
chr10	82272427	.	C	CT	10011.63	PASS	AB=0.550;AC=39;AF=0.696;AN=56;BaseQRankSum=-13.914;DP=549;FS=0.000;HRun=8;HaplotypeScore=52.0577;InbreedingCoeff=0.9268;MQ=75.30;MQ0=0;MQRankSum=0.757;QD=27.21;ReadPosRankSum=4.413;VQSLOD=5.1073;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:27:45.89:581,46,0	1/1:0,6:7:20.89:222,21,0	0/0:11,0:10:13.06:0,13,193	0/0:15,0:15:35.52:0,36,302	1/1:2,19:21:54.09:603,54,0	1/1:3,26:29:69.21:796,69,0	1/1:1,17:18:45.13:519,45,0	0/0:37,0:37:78:0,78,710	1/1:2,22:25:57:638,57,0	1/1:2,28:30:81.23:927,81,0	1/1:3,22:26:69.20:794,69,0	1/1:6,13:19:14.66:423,15,0	1/1:0,9:9:21.06:242,21,0	1/1:3,18:21:45.13:519,45,0	1/1:1,12:13:33.10:381,33,0	0/1:2,9:11:0.39:250,0,0	1/1:0,21:21:57.17:658,57,0	1/1:0,6:6:18.05:208,18,0	0/0:22,0:22:62.99:0,63,566	0/0:25,0:25:60.03:0,60,549	1/1:3,13:16:36.11:415,36,0	1/1:2,13:15:39.12:450,39,0	1/1:2,21:23:42.12:485,42,0	1/1:1,10:11:27.08:312,27,0	1/1:2,18:20:51.15:589,51,0	0/0:26,2:28:5.79:0,6,557	0/0:30,0:30:84.01:0,84,760	0/0:13,0:13:30.01:0,30,274
chr10	82272745	.	GTGTATGTATATTATA	G	2835.48	PASS	AB=0.625;AC=3;AF=0.054;AN=56;BaseQRankSum=8.050;DP=715;FS=2.598;HRun=0;HaplotypeScore=288.0292;InbreedingCoeff=0.6450;MQ=82.55;MQ0=5;MQRankSum=-5.362;QD=64.44;ReadPosRankSum=0.746;VQSLOD=3.2195;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:60.18:0,60,3495	0/0:12,0:12:27.09:0,27,1846	0/0:42,0:36:46.57:0,47,1758	0/0:45,0:37:59.23:0,59,2301	0/0:23,0:23:51.15:0,51,2896	0/0:33,0:33:75.24:0,75,4817	0/0:25,0:25:48.16:0,48,2923	0/0:47,0:47:87.26:0,87,4535	0/0:30,0:30:51.18:0,51,3115	0/0:31,0:31:57.20:0,57,3390	0/0:18,0:18:45.15:0,45,2626	0/0:29,0:29:63.22:0,63,4016	0/0:18,0:18:36.09:0,36,2040	0/0:13,0:13:30.10:0,30,1852	0/0:33,0:32:66.20:0,66,4450	0/0:25,0:24:60.21:0,60,3705	0/0:30,0:30:63.21:0,63,3870	0/0:16,0:15:33.11:0,33,2113	0/0:26,0:26:60.21:0,60,3552	0/0:25,0:25:60.21:0,60,3557	0/0:18,0:18:42.14:0,42,2741	0/0:20,0:20:45.15:0,45,3119	0/0:21,0:21:39.13:0,39,2393	0/0:18,0:18:39.61:0,40,2209	0/0:29,0:29:57.18:0,57,3575	0/1:12,18:30:99:1926,0,160	0/0:17,0:17:39.13:0,39,2541	1/1:6,8:14:24.08:1014,24,0
chr10	82272805	.	C	CGTGT	2570.89	PASS	AB=0.904;AC=27;AF=0.482;AN=56;BaseQRankSum=-1.718;DP=649;FS=0.628;HRun=0;HaplotypeScore=141.5778;InbreedingCoeff=0.0806;MQ=54.85;MQ0=44;MQRankSum=0.874;QD=6.17;ReadPosRankSum=-2.799;VQSLOD=2.1723;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,3:38:62.83:691,63,0	1/1:4,0:11:5.51:65,6,0	0/0:38,0:21:5.58:0,6,32	0/0:32,0:12:0.11:0,0,25	0/0:22,0:21:2.97:0,3,21	0/1:23,0:23:13.04:55,0,13	0/0:24,0:24:15.28:0,15,125	1/1:35,0:35:44.32:296,44,0	0/1:17,0:17:16.12:74,0,16	1/1:18,0:16:0.15:132,0,0	0/1:20,0:20:21.98:71,0,22	0/0:24,0:22:4.37:0,4,38	1/1:13,1:14:20.20:187,20,0	0/1:6,7:13:35.98:204,0,36	0/1:27,0:26:15.42:88,0,15	0/1:26,0:22:20.14:96,0,20	0/1:15,0:16:17.25:42,0,17	0/1:10,0:14:10.87:13,0,11	1/1:22,0:21:37.14:319,37,0	0/1:27,0:27:0.30:64,0,0	0/1:24,0:26:2.27:23,0,2	1/1:8,7:18:6.02:144,6,0	0/1:22,0:23:35.95:52,0,36	0/0:24,0:22:5.96:0,6,45	0/0:20,0:19:3:0,3,25	0/0:31,0:30:58.29:0,58,419	1/1:10,0:10:8.87:128,9,0	0/0:14,0:13:12.01:0,12,112
chr10	82272831	.	TGTGTCTG	T	1079.75	PASS	AB=0.908;AC=4;AF=0.071;AN=56;BaseQRankSum=3.483;DP=702;FS=14.799;HRun=0;HaplotypeScore=149.9215;InbreedingCoeff=0.3355;MQ=48.30;MQ0=50;MQRankSum=-1.103;QD=13.33;ReadPosRankSum=2.063;VQSLOD=1.8708;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:86.56:0,87,1665	0/0:12,0:10:9.03:0,9,170	0/0:32,0:11:33.11:0,33,601	0/0:30,0:11:30.09:0,30,556	0/0:21,0:20:14.61:0,15,309	0/0:21,0:21:15.04:0,15,260	0/0:32,0:32:20.94:0,21,442	0/1:36,0:34:58.98:59,0,1073	0/0:22,0:22:11.79:0,12,300	0/0:24,0:21:54.64:0,55,1326	0/0:20,0:20:17.53:0,18,476	0/0:25,0:23:13.98:0,14,298	0/0:19,0:18:51.17:0,51,1310	0/0:14,0:14:27.09:0,27,752	0/0:31,0:30:8.66:0,9,255	0/0:27,0:21:15.52:0,16,385	0/0:25,0:22:11.86:0,12,207	0/0:18,0:15:30.10:0,30,684	0/0:21,0:19:20.26:0,20,831	0/0:32,0:32:35.19:0,35,504	0/0:28,0:24:24.08:0,24,616	0/0:21,0:21:36.12:0,36,883	0/0:25,0:23:17.81:0,18,369	0/0:33,0:29:8.91:0,9,160	0/0:27,0:25:3.01:0,3,62	0/1:24,7:29:24.77:666,0,25	0/0:13,0:13:11.94:0,12,244	1/1:10,4:13:22.99:469,23,0
chr10	82272832	.	G	GTGTGTCTGTC	3466.49	PASS	AB=0.756;AC=24;AF=0.429;AN=56;BaseQRankSum=-4.117;DP=750;FS=3.243;HRun=0;HaplotypeScore=180.8362;InbreedingCoeff=-0.1988;MQ=49.76;MQ0=47;MQRankSum=-1.781;QD=6.41;ReadPosRankSum=0.725;VQSLOD=2.6645;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:48,0:47:99:137,0,327	1/1:12,0:10:6:93,6,0	0/0:30,0:11:18.13:0,18,275	0/0:32,0:12:16.33:0,16,257	0/1:4,14:25:28.08:30,0,28	0/1:2,16:23:42.65:114,0,43	0/1:15,0:37:9.61:10,0,151	0/1:38,0:36:71.05:71,0,450	0/1:5,0:27:15.72:202,0,16	1/1:8,16:22:39.53:778,40,0	0/1:6,13:24:18.97:19,0,57	0/1:6,15:26:26:26,0,58	0/1:19,0:18:20.04:20,0,407	0/0:14,0:14:17.71:0,18,295	0/1:2,28:35:25.21:307,0,25	0/1:12,13:22:24.39:444,0,24	1/1:6,16:28:11.53:361,12,0	0/1:18,0:15:23.65:261,0,24	0/1:21,0:19:77.04:77,0,187	0/1:31,0:31:3.78:32,0,4	0/1:26,0:23:12.92:291,0,13	0/0:21,0:21:22.81:0,23,287	0/1:10,14:27:28.85:29,0,41	0/0:10,23:32:6.45:0,6,54	0/0:6,18:29:3.01:0,3,34	0/0:31,0:29:56.17:0,56,1106	1/1:13,0:13:6.96:165,7,0	0/0:14,0:13:26.98:0,27,483
chr10	82272838	.	G	GTGTGTGTGTTTT	1636.21	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=2.132;DP=704;FS=8.620;HRun=0;HaplotypeScore=193.1082;InbreedingCoeff=0.1310;MQ=51.34;MQ0=41;MQRankSum=-3.122;QD=5.18;ReadPosRankSum=-2.329;VQSLOD=1.4306;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:48,0:47:14.19:14,0,631	0/0:14,0:12:17.70:0,18,283	0/0:30,0:12:34.63:0,35,573	0/0:28,0:14:32.29:0,32,499	0/0:22,0:21:6.49:0,6,126	0/0:22,0:22:5.32:0,5,205	0/0:34,0:34:3.57:0,4,120	1/1:38,0:36:48.68:605,49,0	0/1:24,0:24:86.59:177,0,87	0/1:21,0:19:17.36:17,0,616	0/0:24,0:24:12.51:0,13,211	0/0:24,0:22:9.97:0,10,173	0/0:17,0:16:45.12:0,45,902	0/0:15,0:15:27.09:0,27,587	0/1:34,0:33:67.95:68,0,132	0/1:23,0:17:64.38:64,0,195	0/1:30,0:27:30.29:30,0,170	0/0:17,0:14:24.08:0,24,499	0/1:17,0:15:9.99:248,0,10	1/1:4,1:34:38.82:320,39,0	0/0:25,0:22:20.64:0,21,328	0/0:15,0:15:27.09:0,27,522	0/0:25,0:23:15.05:0,15,367	0/0:34,0:30:5.69:0,6,47	0/0:31,0:29:3:0,3,28	0/1:34,0:32:57.51:58,0,895	1/1:0,0:13:6.49:199,6,0	0/0:10,0:10:4.28:0,4,253
chr10	82273349	.	TA	T	417.18	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.724;DP=664;FS=4.877;HRun=1;HaplotypeScore=95.1316;InbreedingCoeff=0.9871;MQ=86.33;MQ0=0;MQRankSum=-6.726;QD=14.39;ReadPosRankSum=0.595;VQSLOD=3.1721;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:99:0,123,1943	0/0:14,0:14:42.12:0,42,642	0/0:29,0:29:79.49:0,79,1178	0/0:21,0:21:49.05:0,49,734	0/0:31,0:31:90.29:0,90,1416	0/0:30,0:30:87.27:0,87,1344	0/0:13,0:13:36.12:0,36,576	0/0:38,0:38:99:0,114,1775	0/0:21,0:21:63.21:0,63,1007	0/0:26,0:26:78.27:0,78,1235	0/0:14,0:14:42.14:0,42,669	0/0:23,0:23:69.22:0,69,1080	0/0:19,0:19:51.17:0,51,816	0/0:14,0:14:39.13:0,39,624	0/0:23,0:23:69.24:0,69,1103	0/0:18,0:18:54.18:0,54,863	0/0:26,0:26:78.24:0,78,1222	0/0:16,0:16:48.16:0,48,762	0/0:18,0:18:54.18:0,54,861	0/0:39,0:39:99:0,117,1847	0/0:14,0:14:42.14:0,42,671	0/0:26,0:26:78.24:0,78,1201	0/0:21,0:21:63.21:0,63,1007	0/0:23,0:23:66.18:0,66,1027	0/0:28,0:28:84.26:0,84,1315	1/1:4,17:21:14.25:387,14,0	0/0:46,0:46:99:0,135,2057	1/1:2,6:8:19.70:147,20,0
chr10	82273353	.	CAATGAACAT	C	1682.44	PASS	AB=0.514;AC=3;AF=0.054;AN=56;BaseQRankSum=8.125;DP=663;FS=6.979;HRun=0;HaplotypeScore=202.6101;InbreedingCoeff=0.6405;MQ=85.88;MQ0=0;MQRankSum=-8.102;QD=70.10;ReadPosRankSum=2.398;VQSLOD=2.9102;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:99:0,129,6025	0/0:13,0:13:39.13:0,39,1840	0/0:28,0:29:85.17:0,85,3536	0/0:20,0:20:54.19:0,54,2125	0/0:30,0:30:90.31:0,90,4384	0/0:29,0:29:87.28:0,87,3874	0/0:14,0:14:39.13:0,39,1950	0/0:39,0:39:99:0,117,5496	0/0:21,0:21:63.22:0,63,3061	0/0:25,0:25:75.26:0,75,3641	0/0:14,0:14:42.14:0,42,2102	0/0:23,0:23:69.22:0,69,3144	0/0:19,0:19:51.18:0,51,2540	0/0:14,0:14:39.13:0,39,1971	0/0:24,0:24:72.25:0,72,3546	0/0:17,0:17:51.16:0,51,2415	0/0:27,0:27:81.25:0,81,3770	0/0:16,0:16:48.16:0,48,2334	0/0:21,0:21:63.22:0,63,2949	0/0:40,0:40:99:0,120,5637	0/0:15,0:15:45.15:0,45,2224	0/0:26,0:26:75.26:0,75,3709	0/0:23,0:23:69.24:0,69,3440	0/0:24,0:24:69.24:0,69,3286	0/0:29,0:29:87.30:0,87,4162	0/1:1,17:18:97.81:1295,0,98	0/0:41,0:41:99:0,120,5896	1/1:0,6:6:18.06:491,18,0
chr10	82273382	.	G	GT	9109.45	PASS	AB=0.569;AC=21;AF=0.375;AN=56;BaseQRankSum=-12.466;DP=640;FS=6.267;HRun=6;HaplotypeScore=72.5438;InbreedingCoeff=0.9273;MQ=78.38;MQ0=0;MQRankSum=-1.964;QD=32.08;ReadPosRankSum=1.087;VQSLOD=5.3348;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,36:39:99:1245,99,0	0/0:12,0:12:36.08:0,36,367	0/0:17,0:17:41.84:0,42,387	0/0:14,0:14:26.97:0,27,258	0/0:30,0:30:84.11:0,84,823	0/0:31,0:31:81.18:0,81,825	1/1:0,18:18:48.15:604,48,0	1/1:3,31:34:93.30:1169,93,0	0/0:15,0:15:45.08:0,45,452	0/0:31,0:31:87.20:0,87,888	0/0:18,0:18:51.09:0,51,508	0/0:21,0:21:60.12:0,60,601	1/1:2,17:19:42.03:528,42,0	1/1:1,14:15:39.12:491,39,0	0/0:21,0:21:63.12:0,63,629	0/0:18,0:18:48.07:0,48,475	0/0:22,0:22:63.12:0,63,634	0/0:18,0:18:48.07:0,48,475	1/1:5,19:24:57.18:717,57,0	1/1:4,26:30:78.21:961,78,0	0/0:18,0:18:54.12:0,54,551	1/1:2,22:24:66.21:827,66,0	0/0:24,0:24:69.12:0,69,689	0/0:19,2:21:16.38:0,16,483	0/0:25,0:25:63.14:0,63,643	0/1:7,22:29:11.29:720,0,11	1/1:1,37:37:99:1359,108,0	1/1:0,12:13:39.12:489,39,0
chr10	82273980	.	TA	T	573.64	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.704;DP=616;FS=3.267;HRun=3;HaplotypeScore=58.4169;InbreedingCoeff=0.9987;MQ=83.02;MQ0=0;MQRankSum=-0.878;QD=28.68;ReadPosRankSum=1.171;VQSLOD=2.9229;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:54.17:669,54,0	0/0:12,0:12:33.11:0,33,475	0/0:21,0:21:60.19:0,60,820	0/0:17,0:17:48.13:0,48,598	0/0:31,0:31:93.25:0,93,1288	0/0:27,0:27:81.26:0,81,1147	0/0:26,0:26:72.22:0,72,994	0/0:30,0:30:84.28:0,84,1210	0/0:20,0:20:60.20:0,60,863	0/0:31,0:31:90.30:0,90,1294	0/0:23,0:23:69.23:0,69,993	0/0:17,0:17:51.17:0,51,735	0/0:16,0:16:48.16:0,48,691	0/0:10,0:10:27.09:0,27,386	0/0:24,0:24:72.24:0,72,1013	0/0:18,0:18:51.17:0,51,734	0/0:19,0:19:54.18:0,54,778	0/0:25,0:25:72.20:0,72,1005	0/0:18,0:18:54.17:0,54,761	0/0:27,0:27:81.27:0,81,1165	0/0:30,0:30:90.27:0,90,1259	0/0:16,0:16:48.12:0,48,668	0/0:21,0:21:63.21:0,63,907	0/0:30,0:30:84.28:0,84,1205	0/0:20,0:20:60.19:0,60,848	0/0:28,0:28:78.26:0,78,1119	0/0:25,0:25:69.23:0,69,993	0/0:14,0:14:42.14:0,42,605
chr10	82274038	.	CAAACAT	C	938.01	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.858;DP=589;FS=9.628;HRun=0;HaplotypeScore=140.5869;InbreedingCoeff=0.9958;MQ=77.97;MQ0=0;MQRankSum=-5.344;QD=58.63;ReadPosRankSum=-0.016;VQSLOD=3.2597;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,11:16:45.15:1033,45,0	0/0:9,0:9:27.09:0,27,914	0/0:16,0:13:30.10:0,30,866	0/0:17,0:16:39.02:0,39,843	0/0:35,0:35:93.32:0,93,3217	0/0:23,0:23:66.23:0,66,2215	0/0:22,0:22:60.21:0,60,1937	0/0:32,0:32:93.30:0,93,2896	0/0:15,0:15:39.13:0,39,1249	0/0:28,0:28:84.27:0,84,2633	0/0:28,0:28:78.25:0,78,2682	0/0:10,0:10:30.10:0,30,930	0/0:9,0:9:24.08:0,24,854	0/0:18,0:18:54.19:0,54,1919	0/0:25,0:25:72.25:0,72,2516	0/0:20,0:20:60.21:0,60,1940	0/0:20,0:20:60.21:0,60,2023	0/0:20,0:20:54.16:0,54,1797	0/0:24,0:24:72.16:0,72,2073	0/0:22,0:22:57.20:0,57,1983	0/0:31,0:31:93.32:0,93,3086	0/0:18,0:18:54.19:0,54,1775	0/0:22,0:22:63.20:0,63,1828	0/0:20,0:20:54.19:0,54,1860	0/0:23,0:23:66.21:0,66,2245	0/0:26,0:26:72.23:0,72,2255	0/0:26,0:26:69.22:0,69,2292	0/0:14,0:14:42.14:0,42,1387
chr10	82274228	.	CTTTTTTTTTTTTTTT	C	10177.57	PASS	AB=0.622;AC=29;AF=0.518;AN=56;BaseQRankSum=10.391;DP=453;FS=2.973;HRun=20;HaplotypeScore=151.2357;InbreedingCoeff=0.8616;MQ=54.10;MQ0=17;MQRankSum=-6.440;QD=43.31;ReadPosRankSum=9.027;VQSLOD=-0.6781;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:21:36.12:0,36,1948	1/1:2,6:8:8.95:347,9,0	0/0:27,0:8:18.06:0,18,492	0/0:21,0:6:9.03:0,9,225	1/1:5,11:16:20.71:707,21,0	1/1:2,12:14:36.03:1346,36,0	0/0:15,0:12:33.11:0,33,1733	0/0:12,0:17:44.87:0,45,1781	1/1:6,11:18:8.69:347,9,0	1/1:2,14:16:39:1364,39,0	1/1:2,10:12:17.92:664,18,0	1/1:2,9:11:21.01:810,21,0	0/0:14,0:17:42.14:0,42,1966	0/0:11,0:12:36.12:0,36,1763	1/1:7,13:20:35.85:1345,36,0	1/1:3,11:14:23.96:926,24,0	1/1:10,18:24:14.42:479,14,0	0/1:9,14:21:99:535,0,179	0/0:21,0:20:48.16:0,48,2345	0/0:18,0:21:60.21:0,60,2751	1/1:3,7:10:11.82:382,12,0	0/0:6,0:7:15.05:0,15,590	1/1:5,9:13:8.94:236,9,0	1/1:11,6:13:5.83:135,6,0	1/1:4,10:14:14.95:554,15,0	0/0:10,0:13:27.09:0,27,671	0/0:13,0:15:29.25:0,29,1448	0/0:5,0:5:12.04:0,12,441
chr10	82274953	.	A	AAAAGGGTATCTCCAGG	21033.47	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-0.139;DP=657;FS=1.757;HRun=0;HaplotypeScore=290.7866;InbreedingCoeff=0.9980;MQ=77.19;MQ0=0;MQRankSum=-15.406;QD=175.28;ReadPosRankSum=-0.980;VQSLOD=4.2796;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:88.54:0,89,3948	0/0:6,0:6:18.06:0,18,790	0/0:33,0:33:87.27:0,87,3172	0/0:19,0:19:51.14:0,51,1812	0/0:33,0:33:84.29:0,84,3628	0/0:15,0:15:42.14:0,42,1913	1/1:13,1:15:27.09:1835,27,0	0/0:29,0:29:78.26:0,78,3286	0/0:22,0:22:63.22:0,63,2764	0/0:28,0:28:63.21:0,63,2714	0/0:18,0:18:54.19:0,54,2416	0/0:25,0:25:75.24:0,75,3284	1/1:12,7:21:60.12:3926,60,0	1/1:9,7:17:48.08:3063,48,0	0/0:32,0:32:93.32:0,93,4045	0/0:19,0:19:54.16:0,54,2319	0/0:21,0:21:56.22:0,56,2490	0/0:20,0:20:60.21:0,60,2742	0/0:20,0:20:57.18:0,57,2318	0/0:32,0:32:84.27:0,84,3547	0/0:27,0:27:78.27:0,78,3526	1/1:11,6:18:39.13:2492,39,0	0/0:30,0:30:87.30:0,87,3995	0/0:28,0:28:78.27:0,78,3393	0/0:27,0:27:75.25:0,75,3214	1/1:24,13:39:99:7377,114,0	0/0:18,0:18:45.15:0,45,1964	1/1:7,3:10:30.10:2340,30,0
chr10	82275178	.	C	CAAA	3917.73	PASS	AB=0.774;AC=14;AF=0.250;AN=56;BaseQRankSum=-0.576;DP=655;FS=1.438;HRun=9;HaplotypeScore=117.3492;InbreedingCoeff=0.8128;MQ=68.78;MQ0=0;MQRankSum=-5.011;QD=20.84;ReadPosRankSum=-3.839;VQSLOD=0.9514;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:27:62.95:0,63,402	0/0:8,0:8:24.08:0,24,301	0/0:14,0:14:31.79:0,32,312	0/1:14,0:12:11.98:12,0,154	0/0:32,0:33:90.21:0,90,1102	0/0:14,0:16:33.25:0,33,450	0/0:26,0:26:66.15:0,66,797	1/1:10,17:28:62.51:1025,63,0	0/0:28,0:28:75.19:0,75,924	0/0:34,0:34:96.26:0,96,1172	0/0:31,0:32:82.79:0,83,1026	0/0:21,0:21:54.13:0,54,669	1/1:4,0:14:15.74:50,16,0	0/1:3,0:17:17.02:31,0,17	0/0:28,0:28:75.23:0,75,941	0/0:16,0:16:45.11:0,45,548	0/0:35,0:35:99:0,99,1197	0/0:12,0:12:33.10:0,33,413	1/1:8,13:22:42.58:690,43,0	1/1:10,26:39:87.24:1512,87,0	0/0:13,0:13:24.04:0,24,290	1/1:4,0:26:25.41:79,25,0	0/0:28,0:28:78.24:0,78,983	0/0:16,0:16:45.12:0,45,551	0/0:25,0:25:60.15:0,60,737	0/0:32,0:32:76.82:0,77,979	1/1:1,20:27:29.97:518,30,0	0/0:22,0:22:59.90:0,60,711
chr10	82275199	.	G	GCAAA	5848.58	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.057;DP=660;FS=4.669;HRun=0;HaplotypeScore=121.9413;InbreedingCoeff=0.9957;MQ=59.75;MQ0=0;MQRankSum=-9.233;QD=51.76;ReadPosRankSum=-0.303;VQSLOD=5.9329;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.28:0,90,1453	0/0:8,0:8:21.07:0,21,355	0/0:19,0:13:18.10:0,18,417	0/0:18,0:14:25.90:0,26,399	0/0:29,0:29:63.21:0,63,1032	0/0:14,0:14:33.11:0,33,554	0/0:23,0:23:39.11:0,39,609	0/0:26,0:27:48.63:0,49,796	0/0:31,0:31:81.26:0,81,1314	0/0:30,0:30:66.22:0,66,1097	0/0:30,0:30:87.29:0,87,1443	0/0:21,0:21:54.16:0,54,862	1/1:5,9:15:33.11:778,33,0	1/1:7,14:21:45.15:1035,45,0	0/0:27,0:27:63.20:0,63,1010	0/0:14,0:14:36.10:0,36,557	0/0:42,0:42:99:0,105,1626	0/0:11,0:11:21.07:0,21,336	0/0:24,0:23:54.17:0,54,860	0/0:41,0:41:93.30:0,93,1478	0/0:11,0:11:33.11:0,33,557	1/1:11,12:23:51.16:1091,51,0	0/0:30,0:30:78.27:0,78,1306	0/0:17,0:17:48.15:0,48,785	0/0:20,0:20:45.15:0,45,757	1/1:10,20:29:66.22:1510,66,0	0/0:26,0:26:38.83:0,39,617	1/1:3,20:23:60.21:1435,60,0
chr10	82275623	.	TG	T	15992.60	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.513;DP=718;FS=5.985;HRun=8;HaplotypeScore=83.0230;InbreedingCoeff=0.9988;MQ=67.41;MQ0=3;MQRankSum=-7.683;QD=24.53;ReadPosRankSum=5.585;VQSLOD=5.1977;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,39:46:99:1044,109,0	1/1:1,7:8:24.04:229,24,0	0/0:34,0:30:41.35:0,41,663	0/0:31,0:30:49.53:0,50,620	1/1:2,19:21:60.10:579,60,0	1/1:2,27:29:78.12:753,78,0	1/1:4,20:24:54.08:521,54,0	1/1:1,27:29:80.11:750,80,0	1/1:1,31:32:90.14:869,90,0	1/1:1,21:22:63.10:608,63,0	1/1:3,14:17:36.05:348,36,0	1/1:2,26:28:75.12:724,75,0	1/1:2,25:27:72.11:695,72,0	1/1:4,22:26:62.24:607,62,0	1/1:4,31:35:90.14:869,90,0	1/1:2,23:25:69.11:666,69,0	1/1:4,15:19:45.07:435,45,0	1/1:4,21:24:57.09:550,57,0	1/1:2,15:17:42.04:395,42,0	1/1:0,16:16:45.07:434,45,0	1/1:5,34:39:99:979,102,0	1/1:3,19:22:48.08:463,48,0	1/1:1,27:28:78.13:753,78,0	1/1:0,23:23:57.09:550,57,0	1/1:0,21:21:57.09:550,57,0	1/1:7,18:25:60.09:579,60,0	1/1:3,23:26:63.10:608,63,0	1/1:1,21:22:45.07:434,45,0
chr10	82275711	.	C	CTGTATG	698.13	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.472;DP=917;FS=5.430;HRun=0;HaplotypeScore=194.7351;InbreedingCoeff=0.9977;MQ=65.72;MQ0=0;MQRankSum=-4.801;QD=26.85;ReadPosRankSum=0.527;VQSLOD=2.7818;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:95:0,95,1944	0/0:18,0:18:48.15:0,48,964	0/0:45,0:44:87.26:0,87,1633	0/0:51,0:51:89.67:0,90,1739	0/0:20,0:20:51.18:0,51,1093	0/0:31,0:31:69.21:0,69,1390	1/1:10,15:26:23.83:791,24,0	0/0:46,0:46:81.21:0,81,1538	0/0:38,0:38:78.27:0,78,1663	0/0:47,0:47:99:0,129,2563	0/0:26,0:26:72.19:0,72,1360	0/0:34,0:34:75.26:0,75,1598	0/0:39,0:39:93.21:0,93,1875	0/0:37,0:37:93.29:0,93,1904	0/0:36,0:36:87.28:0,87,1801	0/0:28,0:28:75.22:0,75,1502	0/0:17,0:17:42.14:0,42,844	0/0:19,0:19:42.14:0,42,903	0/0:28,0:28:48.13:0,48,951	0/0:34,0:34:96.33:0,96,2050	0/0:56,0:56:99:0,141,2840	0/0:29,0:29:72.25:0,72,1549	0/0:30,0:30:75.24:0,75,1541	0/0:31,0:31:72.21:0,72,1450	0/0:23,0:23:48.15:0,48,994	0/0:35,0:35:81.25:0,81,1617	0/0:30,0:30:75.24:0,75,1500	0/0:21,0:21:45.15:0,45,964
chr10	82276108	.	TACC	T	2452.86	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.827;DP=738;FS=3.265;HRun=0;HaplotypeScore=136.4128;InbreedingCoeff=1.0000;MQ=86.61;MQ0=0;MQRankSum=-3.030;QD=35.04;ReadPosRankSum=1.677;VQSLOD=4.4831;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,2327	0/0:22,0:22:66.23:0,66,1474	0/0:29,0:29:81.26:0,81,1675	0/0:24,0:24:62.48:0,62,1118	0/0:15,0:15:42.14:0,42,918	0/0:28,0:28:78.25:0,78,1653	0/0:32,0:32:93.30:0,93,1988	0/0:29,0:29:81.28:0,81,1810	0/0:29,0:29:84.29:0,84,1871	0/0:23,0:23:63.17:0,63,1298	0/0:27,0:27:78.27:0,78,1717	0/0:28,0:28:81.23:0,81,1714	1/1:1,21:22:48.16:784,48,0	1/1:2,26:28:60.20:979,60,0	0/0:24,0:24:69.24:0,69,1519	0/0:26,0:26:72.25:0,72,1558	0/0:33,0:33:96.33:0,96,2143	0/0:32,0:32:93.30:0,93,2015	0/0:28,0:28:81.26:0,81,1696	0/0:25,0:25:75.26:0,75,1671	0/0:29,0:29:81.23:0,81,1723	1/1:1,19:20:51.17:833,51,0	0/0:26,0:26:75.24:0,75,1587	0/0:30,0:30:87.30:0,87,1921	0/0:22,0:22:66.20:0,66,1424	0/0:24,0:24:69.24:0,69,1541	0/0:28,0:28:75.26:0,75,1674	0/0:18,0:18:54.19:0,54,1206
chr10	82276359	.	AACATCCT	A	23589.46	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=14.337;DP=649;FS=8.816;HRun=0;HaplotypeScore=174.3533;InbreedingCoeff=0.9954;MQ=83.83;MQ0=0;MQRankSum=-16.718;QD=51.28;ReadPosRankSum=1.625;VQSLOD=4.2654;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,26:33:60.21:1479,60,0	1/1:1,15:16:39.13:973,39,0	0/0:31,0:31:75.16:0,75,2544	0/0:39,0:39:94.57:0,95,3516	1/1:3,25:28:51.18:1252,51,0	1/1:2,15:17:45.15:1123,45,0	1/1:3,25:28:69.24:1699,69,0	1/1:9,19:28:57.18:1326,57,0	1/1:4,22:26:60.21:1497,60,0	1/1:4,19:23:60.19:1438,60,0	1/1:3,12:15:27.05:619,27,0	1/1:6,23:29:57.20:1386,57,0	0/0:28,0:28:75.08:0,75,2646	0/0:21,0:21:60.21:0,60,2156	1/1:2,23:25:54.19:1347,54,0	1/1:3,19:22:51.18:1272,51,0	1/1:5,17:22:36.12:898,36,0	1/1:5,10:15:21.07:524,21,0	1/1:1,8:9:24.04:425,24,0	1/1:3,14:17:36.12:898,36,0	1/1:6,10:16:15.05:374,15,0	0/0:23,0:23:66.21:0,66,2400	1/1:5,19:24:51.18:1272,51,0	1/1:1,17:18:24.08:598,24,0	1/1:2,16:18:45.15:1123,45,0	0/0:35,0:35:75.34:0,75,3666	1/1:0,31:31:87.26:2067,87,0	0/0:12,0:12:36.12:0,36,1403
chr10	82276692	.	T	TC	4057.77	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.913;DP=788;FS=0.000;HRun=4;HaplotypeScore=102.7870;InbreedingCoeff=0.9995;MQ=87.34;MQ0=0;MQRankSum=-1.611;QD=34.39;ReadPosRankSum=2.980;VQSLOD=3.5294;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:65:99:0,174,1971	0/0:10,0:10:30.09:0,30,339	0/0:32,0:32:84.04:0,84,891	0/0:28,0:28:62.91:0,63,649	0/0:21,0:21:54.13:0,54,600	0/0:12,0:12:30.03:0,30,308	0/0:33,0:33:87.22:0,87,966	0/0:21,0:21:57.15:0,57,637	0/0:34,0:34:99:0,102,1156	0/0:19,0:19:54.15:0,54,611	0/0:15,0:15:39.11:0,39,442	0/0:23,0:23:69.20:0,69,782	1/1:1,14:15:42.14:568,42,0	1/1:3,32:35:90.30:1231,90,0	0/0:37,0:37:99:0,105,1182	0/0:38,0:38:99:0,111,1259	0/0:32,0:32:87.23:0,87,976	0/0:13,0:13:39.11:0,39,442	0/0:11,0:11:30.06:0,30,322	0/0:31,0:31:93.27:0,93,1053	0/0:47,0:47:99:0,123,1395	1/1:3,25:28:66.22:901,66,0	0/0:28,0:28:75.20:0,75,840	0/0:50,0:50:99:0,141,1587	0/0:26,0:26:75.21:0,75,851	1/1:3,22:25:35.18:865,35,0	0/0:44,0:44:99:0,126,1413	1/1:3,12:15:36.12:492,36,0
chr10	82277422	.	TGTGCGTGCGTGC	T	950.76	PASS	AC=16;AF=0.889;AN=18;BaseQRankSum=2.180;DP=410;FS=3.123;HRun=0;HaplotypeScore=147.9098;MQ=75.30;MQ0=4;MQRankSum=-1.401;QD=8.49;ReadPosRankSum=-0.311;VQSLOD=1.9592;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	1/1:7,0:7:3.01:101,3,0	./.	./.	1/1:14,2:16:3.01:101,3,0	./.	./.	1/1:14,0:14:3.01:92,3,0	./.	./.	1/1:16,2:18:3.01:101,3,0	1/1:7,3:10:6.02:202,6,0	1/1:26,2:28:3.01:101,3,0	0/0:23,0:23:7.27:0,7,127	./.	./.	./.	./.	./.	./.	./.	1/1:7,0:11:9.03:251,9,0	./.	1/1:6,0:8:3.01:84,3,0
chr10	82277466	.	C	CAT	926.66	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.673;DP=284;FS=1.950;HRun=0;HaplotypeScore=73.4807;InbreedingCoeff=0.6634;MQ=53.74;MQ0=12;MQRankSum=-3.979;QD=46.33;ReadPosRankSum=1.662;VQSLOD=4.7881;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:5.84:0,6,39	0/0:7,0:6:9.03:0,9,146	0/0:13,0:4:8.47:0,8,134	0/0:7,0:3:9.01:0,9,121	0/0:6,0:6:18.04:0,18,264	0/0:6,0:4:8.95:0,9,89	0/0:10,0:9:15:0,15,168	0/0:4,0:4:6.02:0,6,84	0/0:15,0:15:30.07:0,30,451	0/0:5,0:5:15.04:0,15,219	0/0:1,0:1:3.01:0,3,49	0/0:15,0:14:36.04:0,36,568	1/1:9,0:9:27.09:523,27,0	1/1:5,1:6:18.06:324,18,0	0/0:16,0:16:30.07:0,30,456	0/0:9,0:9:24.01:0,24,334	0/0:27,0:26:60.14:0,60,897	0/0:30,0:30:78.19:0,78,1168	0/0:5,0:4:12.02:0,12,165	0/0:4,0:4:3.01:0,3,45	0/0:16,0:15:26.96:0,27,404	1/1:2,3:5:12.04:214,12,0	0/0:5,0:5:9.03:0,9,146	0/0:24,0:24:51.12:0,51,776	0/0:5,0:5:12.04:0,12,192	0/0:10,0:10:6.86:0,7,317	0/0:8,0:8:12.04:0,12,195	0/0:3,0:3:5.91:0,6,65
chr10	82279071	.	C	CCT	26589.49	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-9.954;DP=656;FS=1.817;HRun=0;HaplotypeScore=63.8020;InbreedingCoeff=0.9966;MQ=84.82;MQ0=0;MQRankSum=-11.618;QD=44.99;ReadPosRankSum=7.974;VQSLOD=5.8522;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:63.22:1111,63,0	1/1:0,10:10:27.09:476,27,0	0/0:32,0:32:75.20:0,75,954	0/0:32,0:32:86.24:0,86,1115	1/1:1,20:21:57.14:972,57,0	1/1:3,19:23:51.17:888,51,0	1/1:0,25:25:69.24:1218,69,0	1/1:4,20:25:63.10:1020,63,0	1/1:1,18:19:48.16:847,48,0	1/1:0,30:32:96.32:1669,96,0	1/1:1,18:19:51.17:900,51,0	1/1:1,25:26:69.24:1216,69,0	1/1:1,9:10:21.07:370,21,0	1/1:0,10:11:30.10:530,30,0	1/1:2,19:21:54.19:953,54,0	1/1:1,24:25:66.23:1165,66,0	1/1:0,27:27:66.23:1165,66,0	1/1:1,22:24:63.22:1112,63,0	1/1:2,16:18:48.15:805,48,0	1/1:3,20:23:60.20:1029,60,0	1/1:1,35:36:84.29:1483,84,0	1/1:2,9:11:27.09:477,27,0	1/1:1,24:27:75.26:1323,75,0	1/1:1,24:26:63.22:1112,63,0	1/1:0,24:25:66.23:1165,66,0	1/1:2,32:36:96.30:1627,96,0	1/1:1,20:21:54.19:953,54,0	1/1:1,21:22:57.20:1006,57,0
chr10	82279349	.	GT	G	6074.48	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=4.683;DP=547;FS=9.539;HRun=9;HaplotypeScore=76.1288;InbreedingCoeff=0.9664;MQ=79.98;MQ0=0;MQRankSum=-2.610;QD=22.17;ReadPosRankSum=4.724;VQSLOD=5.2668;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,126,1434	1/1:0,6:6:17.96:156,18,0	0/0:19,0:19:35.88:0,36,341	0/0:11,0:11:17.79:0,18,152	1/1:1,21:22:62.93:558,63,0	1/1:2,22:24:60.02:549,60,0	0/0:19,0:19:57.17:0,57,658	0/0:39,0:39:99:0,105,1185	1/1:1,14:15:42.02:384,42,0	1/1:5,26:31:54.74:683,55,0	1/1:3,17:20:23.43:379,23,0	1/1:1,12:13:36.02:329,36,0	0/0:12,0:12:14.48:0,14,83	0/0:13,0:13:14.66:0,15,92	1/1:4,15:19:45.02:412,45,0	1/1:3,14:17:39.02:357,39,0	1/1:4,17:21:48.02:439,48,0	1/1:0,9:9:24.01:220,24,0	0/0:20,0:20:54.14:0,54,604	0/0:29,0:29:75.22:0,75,866	1/1:1,17:18:45.02:412,45,0	0/0:3,0:3:0:0,0,0	1/1:3,18:21:54:488,54,0	1/1:3,18:21:19.41:432,19,0	1/1:2,15:17:30.01:275,30,0	0/0:29,1:30:56.73:0,57,870	0/0:17,0:17:48.14:0,48,554	0/0:15,0:15:45.13:0,45,519
chr10	82279848	.	G	GATTTATTTATTT	3915.99	PASS	AC=26;AF=0.619;AN=42;BaseQRankSum=-3.516;DP=290;FS=5.830;HRun=0;HaplotypeScore=99.9244;InbreedingCoeff=0.5698;MQ=62.52;MQ0=0;MQRankSum=-2.736;QD=29.67;ReadPosRankSum=-2.280;VQSLOD=1.9387;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:6.02:0,6,205	1/1:6,0:6:3.01:66,3,0	./.	./.	1/1:7,2:9:9.03:233,9,0	1/1:16,0:16:9.03:345,9,0	./.	./.	1/1:11,1:12:9.03:412,9,0	1/1:7,1:8:6.02:348,6,0	1/1:10,0:10:6:198,6,0	./.	./.	0/0:7,0:7:6.02:0,6,205	1/1:9,1:10:6.02:253,6,0	1/1:3,0:4:6.02:153,6,0	1/1:16,3:18:24.08:1062,24,0	1/1:16,0:16:12.04:361,12,0	0/0:14,0:18:12.04:0,12,302	0/0:10,0:11:3.01:0,3,84	1/1:3,1:4:3.01:142,3,0	0/0:5,0:5:3.01:0,3,95	1/1:5,1:6:3.01:169,3,0	./.	1/1:10,2:12:3.01:174,3,0	0/0:9,0:9:3.01:0,3,102	0/0:7,0:7:3:0,3,29	0/0:23,0:23:21.07:0,21,615
chr10	82282956	.	TA	T	908.38	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.661;DP=534;FS=0.000;HRun=10;HaplotypeScore=91.4242;InbreedingCoeff=0.9890;MQ=79.76;MQ0=2;MQRankSum=0.234;QD=18.92;ReadPosRankSum=0.678;VQSLOD=3.9614;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:90.18:0,90,956	0/0:10,0:10:30.08:0,30,331	0/0:32,0:21:37.31:0,37,330	0/0:18,0:14:15.46:0,15,167	0/0:24,0:24:62.98:0,63,637	0/0:13,0:13:30.07:0,30,323	0/0:13,0:13:30.83:0,31,151	0/0:31,0:30:86.82:0,87,865	0/0:9,0:9:27.03:0,27,285	0/0:25,0:25:51.50:0,51,530	0/0:20,0:20:49.28:0,49,546	0/0:13,0:13:33.04:0,33,344	0/0:17,0:17:42.07:0,42,440	0/0:10,0:10:30.04:0,30,318	0/0:20,0:20:54.15:0,54,596	0/0:14,0:14:38.87:0,39,375	0/0:17,0:17:51.09:0,51,542	0/0:17,0:17:51.11:0,51,544	0/0:25,0:25:69.09:0,69,712	0/0:22,0:22:27.01:0,27,446	0/0:9,0:9:24.05:0,24,254	0/0:17,0:17:45.12:0,45,497	0/0:16,0:16:44.88:0,45,441	0/0:11,0:11:30.05:0,30,319	0/0:21,0:21:53.17:0,53,603	1/1:4,21:25:59.93:509,60,0	0/0:23,0:24:64.50:0,64,721	1/1:0,23:23:59.99:521,60,0
chr10	82283274	.	CTGTT	C	2731.21	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.292;DP=882;FS=3.289;HRun=0;HaplotypeScore=157.0289;InbreedingCoeff=0.9979;MQ=75.26;MQ0=0;MQRankSum=-6.323;QD=47.09;ReadPosRankSum=2.533;VQSLOD=4.3285;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:94.01:0,94,2125	0/0:11,0:11:33.10:0,33,837	0/0:32,0:30:71.91:0,72,1483	0/0:62,0:49:70.71:0,71,1799	0/0:31,0:31:93.32:0,93,2410	0/0:26,0:26:72.25:0,72,1905	0/0:26,0:26:73.66:0,74,1631	0/0:44,0:44:99:0,123,3131	0/0:33,0:33:96.30:0,96,2464	0/0:48,0:48:99:0,138,3512	0/0:25,0:25:72.19:0,72,1699	0/0:39,0:39:99:0,117,2959	0/0:29,0:29:87.26:0,87,1980	0/0:24,0:24:69.22:0,69,1776	0/0:46,0:46:99:0,132,3297	0/0:22,0:22:66.22:0,66,1692	0/0:27,0:26:75.23:0,75,1935	0/0:17,0:16:48.16:0,48,1229	0/0:23,0:22:63.19:0,63,1565	0/0:22,0:22:60.21:0,60,1539	0/0:63,0:63:99:0,175,4406	0/0:26,0:26:75.26:0,75,1973	0/0:27,0:27:81.28:0,81,2128	0/0:27,0:28:72.25:0,72,1929	0/0:30,0:29:84.24:0,84,2118	1/1:3,35:38:21.30:1713,21,0	0/0:25,0:25:60.18:0,60,1493	1/1:0,20:20:60.21:1139,60,0
chr10	82283362	.	GTC	G	2074.75	PASS	AB=0.992;AC=21;AF=0.375;AN=56;BaseQRankSum=10.071;DP=978;FS=5.972;HRun=0;HaplotypeScore=216.8758;InbreedingCoeff=-0.2879;MQ=57.75;MQ0=21;MQRankSum=2.209;QD=3.22;ReadPosRankSum=10.778;VQSLOD=0.7279;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:17.97:0,18,147	1/1:18,0:18:10.27:117,10,0	0/0:43,0:18:20.69:0,21,353	0/0:51,0:24:29.92:0,30,416	0/1:35,1:35:99:162,0,141	0/1:26,0:26:85.38:85,0,119	0/0:34,0:34:21.99:0,22,240	0/0:57,0:57:99:0,133,1048	0/1:33,0:32:99:133,0,173	0/1:37,1:38:90.91:91,0,310	0/1:14,1:14:25.83:42,0,26	0/1:50,0:49:99:150,0,225	0/1:35,0:34:99:199,0,129	1/1:28,1:29:14.36:160,14,0	0/1:47,0:47:99:167,0,174	0/1:42,0:42:99:156,0,207	0/1:35,0:35:98.02:112,0,98	0/1:31,0:29:85.79:86,0,165	0/0:20,0:18:49.72:0,50,391	0/0:32,0:32:51.01:0,51,282	0/1:76,2:77:99:177,0,389	0/1:37,0:37:99:107,0,266	0/1:32,0:32:99:117,0,116	0/1:34,0:34:99:135,0,133	0/1:23,0:23:45.42:45,0,138	0/0:33,0:33:44.84:0,45,441	0/0:25,0:25:33.52:0,34,214	0/1:6,0:6:1.99:2,0,16
chr10	82283364	.	CTG	C	12419.37	PASS	AB=0.762;AC=49;AF=0.875;AN=56;BaseQRankSum=-3.422;DP=960;FS=2.797;HRun=0;HaplotypeScore=180.0376;InbreedingCoeff=0.2388;MQ=57.16;MQ0=23;MQRankSum=2.694;QD=14.23;ReadPosRankSum=4.132;VQSLOD=4.8381;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,1:34:1.81:0,2,5	1/1:2,15:17:36.11:418,36,0	0/1:43,1:16:24.03:24,0,77	0/0:53,0:22:3.01:0,3,47	1/1:13,22:35:64.26:710,64,0	1/1:9,16:25:47.56:511,48,0	0/1:13,0:32:9.53:56,0,10	1/1:26,0:51:4.22:139,4,0	1/1:9,23:31:15.39:648,15,0	1/1:17,22:39:63.16:711,63,0	1/1:6,6:14:30.47:287,30,0	1/1:16,33:48:75.03:850,75,0	1/1:10,25:34:72.21:834,72,0	1/1:3,25:29:50.98:570,51,0	1/1:11,34:45:75.22:870,75,0	1/1:14,28:42:59.50:859,60,0	1/1:7,24:35:56.88:650,57,0	1/1:13,15:28:0.26:461,0,0	1/1:13,0:20:11.36:56,11,0	1/1:8,0:33:34.24:171,34,0	1/1:36,38:74:76.64:928,77,0	1/1:14,23:37:10.54:580,11,0	1/1:8,22:32:62.85:690,63,0	1/1:11,23:34:52.81:624,53,0	1/1:6,15:22:7.96:302,8,0	0/1:17,0:32:27.30:213,0,27	1/1:8,0:25:33.80:175,34,0	1/1:1,0:5:11.78:80,12,0
chr10	82283462	.	ATGTC	A	1731.99	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.701;DP=1086;FS=6.220;HRun=0;HaplotypeScore=195.9130;InbreedingCoeff=0.9220;MQ=61.91;MQ0=14;MQRankSum=-9.071;QD=29.36;ReadPosRankSum=1.966;VQSLOD=2.6326;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,11:19:2.61:98,3,0	0/0:6,0:6:15.05:0,15,381	0/0:53,0:20:18.84:0,19,257	0/0:80,0:34:30.79:0,31,660	0/0:26,0:26:57.20:0,57,1414	0/0:31,0:31:84.17:0,84,1847	0/0:39,0:39:99:0,99,2406	0/0:48,0:48:99:0,105,2374	0/0:44,0:43:99:0,111,2638	0/0:54,0:53:99:0,138,3152	0/0:28,0:27:69.35:0,69,1570	0/0:55,0:55:99:0,135,3246	0/0:23,0:23:66.23:0,66,1574	0/0:45,0:45:99:0,123,2999	0/0:62,0:62:99:0,160,3812	0/0:41,0:41:99:0,120,2903	0/0:44,0:44:99:0,105,2478	0/0:33,0:33:93.25:0,93,2111	0/0:23,0:21:33.11:0,33,689	0/0:34,0:34:87.09:0,87,2122	0/0:88,0:88:99:0,216,5011	0/0:27,0:27:69.20:0,69,1578	0/0:33,0:33:69.15:0,69,1631	0/0:55,0:55:99:0,153,3623	0/0:30,0:30:84.25:0,84,1931	1/1:7,21:27:69.24:1193,69,0	0/0:23,0:23:66.23:0,66,1590	1/1:0,11:11:33.11:573,33,0
chr10	82283526	.	GTGTA	G	123.72	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.520;DP=939;FS=23.240;HRun=0;HaplotypeScore=178.6831;InbreedingCoeff=0.8230;MQ=58.77;MQ0=6;MQRankSum=-4.611;QD=4.58;ReadPosRankSum=-0.663;VQSLOD=1.0793;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,9:26:23.59:217,24,0	0/0:10,0:10:30.07:0,30,663	0/0:32,0:14:20.89:0,21,419	0/0:36,0:19:34.15:0,34,446	0/0:24,0:24:69:0,69,1406	0/0:25,0:25:62.94:0,63,1488	0/0:27,0:27:65.74:0,66,1191	0/0:47,0:47:99:0,111,2348	0/0:36,0:36:93.11:0,93,2000	0/0:45,0:45:99:0,120,2614	0/0:27,0:27:71.90:0,72,1686	0/0:43,0:43:99:0,120,3013	0/0:23,0:23:69.14:0,69,1542	0/0:34,0:34:73.08:0,73,1897	0/0:55,0:55:99:0,156,3318	0/0:45,0:45:99:0,123,2617	0/0:33,0:33:93.14:0,93,2101	0/0:32,0:33:17.69:0,18,1330	0/0:24,0:19:51.07:0,51,1167	0/0:30,0:30:90.19:0,90,1899	0/0:98,0:98:99:0,260,5712	0/0:39,0:39:85.53:0,86,2388	0/0:27,0:27:72.19:0,72,1562	0/0:47,0:47:99:0,107,2393	0/0:29,0:29:81.50:0,82,1728	0/0:10,0:9:13.14:0,13,136	0/0:30,0:30:72.13:0,72,1615	0/0:2,0:2:2.94:0,3,18
chr10	82283529	.	T	TGCCC	448.12	PASS	AB=0.833;AC=3;AF=0.054;AN=56;BaseQRankSum=5.922;DP=940;FS=2.470;HRun=0;HaplotypeScore=182.6130;InbreedingCoeff=0.4721;MQ=59.61;MQ0=6;MQRankSum=-4.479;QD=37.34;ReadPosRankSum=-0.684;VQSLOD=3.7305;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:18.80:0,19,286	0/0:10,0:10:30.10:0,30,626	0/0:34,0:17:31.56:0,32,617	0/0:35,0:21:45.15:0,45,866	0/0:24,0:24:69.24:0,69,1410	0/0:24,0:24:66.23:0,66,1365	0/0:26,0:26:70.53:0,71,1338	0/0:50,0:50:99:0,144,2722	0/0:36,0:36:93.32:0,93,1890	0/0:46,0:46:99:0,132,2673	0/0:24,0:24:72.25:0,72,1501	0/0:45,0:45:99:0,126,2563	0/0:24,0:24:72.21:0,72,1420	0/0:34,0:34:87.25:0,87,1993	0/0:55,0:55:99:0,160,3177	0/0:48,0:48:99:0,129,2620	0/0:31,0:31:93.32:0,93,1910	0/0:31,0:32:74.62:0,75,1632	0/0:24,0:19:54.17:0,54,1068	0/0:31,0:31:93.32:0,93,1924	0/0:98,0:98:99:0,264,5428	0/0:39,0:39:99:0,111,2210	0/0:28,0:28:78.23:0,78,1497	0/0:46,0:46:99:0,126,2503	0/0:29,0:29:82.81:0,83,1646	0/1:8,2:9:38.67:459,0,39	0/0:29,0:29:72.25:0,72,1495	1/1:0,2:2:3.01:80,3,0
chr10	82283745	.	G	GGT	4708.06	PASS	AB=0.870;AC=32;AF=0.615;AN=52;BaseQRankSum=-3.736;DP=803;FS=8.702;HRun=0;HaplotypeScore=147.7729;InbreedingCoeff=-0.2301;MQ=55.41;MQ0=23;MQRankSum=0.278;QD=6.61;ReadPosRankSum=-0.437;VQSLOD=4.0368;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,3:46:5.50:71,6,0	1/1:12,0:11:2.30:14,2,0	./.	0/1:37,0:19:0:0,0,0	0/0:22,0:22:2.51:0,3,32	0/1:22,3:26:2.75:168,0,3	0/1:26,0:27:10.36:10,0,41	0/1:33,0:33:14.46:14,0,26	0/1:22,8:30:48.23:315,0,48	1/1:22,11:34:28.08:335,28,0	0/1:19,1:20:35.03:117,0,35	1/1:17,6:24:6.54:469,7,0	0/1:12,9:23:43.91:200,0,44	0/1:15,12:30:2.43:366,0,2	0/1:18,15:33:23.45:368,0,23	0/1:16,12:29:17.59:550,0,18	0/1:16,5:22:17.45:163,0,17	1/1:14,7:22:17.34:223,17,0	0/1:31,0:29:1.99:2,0,182	0/1:23,0:21:8.51:9,0,136	0/1:53,1:54:62.16:129,0,62	1/1:19,7:30:11.80:160,12,0	0/1:17,2:20:19.71:111,0,20	1/1:17,23:43:14.36:631,14,0	0/1:19,0:18:29.72:30,0,59	1/1:34,0:33:33.06:255,33,0	0/0:18,0:17:12.02:0,12,121	./.
chr10	82283960	.	C	CT	1277.14	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.694;DP=492;FS=2.497;HRun=1;HaplotypeScore=72.4476;InbreedingCoeff=0.8998;MQ=96.80;MQ0=0;MQRankSum=-9.031;QD=37.56;ReadPosRankSum=3.236;VQSLOD=4.3197;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:27.09:374,27,0	0/0:10,0:10:30.10:0,30,420	0/0:17,0:17:48.14:0,48,652	0/0:34,0:34:89.43:0,89,1265	0/0:22,0:22:66.19:0,66,888	0/0:28,0:28:78.26:0,78,1091	0/0:18,0:18:51.14:0,51,678	0/0:34,0:34:99:0,99,1371	0/0:13,0:13:39.13:0,39,545	0/0:23,0:22:66.22:0,66,910	0/0:17,0:17:48.16:0,48,670	0/0:20,0:20:57.11:0,57,708	0/0:18,0:18:48.16:0,48,671	0/0:12,0:12:36.12:0,36,502	0/0:12,0:12:36.12:0,36,503	0/0:10,0:10:30.10:0,30,419	0/0:16,0:16:48.16:0,48,671	0/0:10,0:10:27.09:0,27,378	0/0:17,0:17:51.15:0,51,681	0/0:22,0:22:66.22:0,66,923	0/0:29,0:29:87.25:0,87,1179	0/0:16,0:16:45.15:0,45,626	0/0:23,0:23:69.20:0,69,926	0/0:13,0:13:36.08:0,36,481	0/0:13,0:13:39.12:0,39,528	1/1:1,13:14:0.18:539,0,0	0/0:11,0:11:30.10:0,30,419	1/1:0,11:11:33.11:494,33,0
chr10	82283964	.	AGGCAGAGGGG	A	3161.89	PASS	AB=0.519;AC=5;AF=0.089;AN=56;BaseQRankSum=9.593;DP=490;FS=3.550;HRun=0;HaplotypeScore=157.3647;InbreedingCoeff=0.7789;MQ=96.25;MQ0=0;MQRankSum=-9.516;QD=93.00;ReadPosRankSum=4.254;VQSLOD=3.6493;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:27.09:890,27,0	0/0:10,0:10:30.10:0,30,1649	0/0:17,0:17:51.17:0,51,2462	0/0:33,0:33:99:0,99,4285	0/0:20,0:20:60.21:0,60,3066	0/0:29,0:29:84.27:0,84,4045	0/0:16,0:16:45.15:0,45,2074	0/0:34,0:34:99:0,102,4833	0/0:13,0:13:39.13:0,39,2056	0/0:24,0:23:72.25:0,72,3575	0/0:16,0:16:48.12:0,48,2281	0/0:20,0:20:60.21:0,60,3242	0/0:17,0:17:48.16:0,48,2383	0/0:12,0:12:36.08:0,36,1752	0/0:12,0:12:33.11:0,33,1713	0/0:11,0:11:33.07:0,33,1554	0/0:16,0:16:48.16:0,48,2593	0/0:12,0:12:36.12:0,36,1946	0/0:18,0:18:54.19:0,54,2722	0/0:21,0:21:63.22:0,63,3196	0/0:30,0:30:90.29:0,90,4651	0/0:17,0:17:51.18:0,51,2692	0/0:23,0:23:66.23:0,66,3483	0/0:11,0:11:33.11:0,33,1643	0/0:14,0:14:39.13:0,39,2121	0/1:1,13:14:36.05:1281,0,36	0/0:10,0:10:27.09:0,27,1207	1/1:0,11:11:33.11:1121,33,0
chr10	82284999	.	G	GAC	15736.52	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=9.102;DP=820;FS=28.038;HRun=0;HaplotypeScore=153.6166;InbreedingCoeff=0.9480;MQ=57.21;MQ0=5;MQRankSum=7.878;QD=35.76;ReadPosRankSum=11.392;VQSLOD=2.9893;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,2:58:99:0,150,2017	1/1:0,5:5:12.04:213,12,0	0/0:38,0:21:57.04:0,57,720	0/0:41,0:28:62.83:0,63,716	1/1:1,10:11:27.09:479,27,0	1/1:3,9:12:24.08:425,24,0	0/0:44,0:44:99:0,120,1595	0/0:31,0:28:78.23:0,78,1023	1/1:3,33:36:87.30:1542,87,0	1/1:6,29:35:86.79:1448,87,0	1/1:1,8:9:12.04:213,12,0	1/1:5,30:35:81.28:1431,81,0	1/1:3,25:28:66.23:1159,66,0	1/1:1,15:15:36.12:638,36,0	1/1:4,27:31:60.21:1064,60,0	1/1:3,24:25:57.20:1010,57,0	1/1:2,17:19:39.13:691,39,0	1/1:5,16:20:37.90:689,38,0	0/0:30,0:30:78.23:0,78,1017	0/0:37,0:37:67.78:0,68,1193	1/1:5,50:54:99:1862,105,0	1/1:1,19:20:36.12:638,36,0	1/1:3,17:20:36.12:638,36,0	1/1:3,25:28:51.17:904,51,0	1/1:2,18:20:39.13:692,39,0	0/0:59,0:59:99:0,140,2158	0/0:42,0:42:99:0,120,1584	0/1:12,0:12:0.64:1,0,417
chr10	82285734	.	GTGGTTCATCGCTCTCTGCAAC	G	6043.24	PASS	AB=0.581;AC=7;AF=0.125;AN=56;BaseQRankSum=10.013;DP=661;FS=0.000;HRun=0;HaplotypeScore=348.8247;InbreedingCoeff=0.7926;MQ=88.84;MQ0=0;MQRankSum=-9.531;QD=102.43;ReadPosRankSum=2.361;VQSLOD=3.6282;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:19:36.12:1996,36,0	0/0:13,0:13:39.12:0,39,3476	0/0:27,0:27:72.20:0,72,3787	0/0:23,0:23:63.22:0,63,4278	0/0:32,0:32:96.32:0,96,7544	0/0:20,0:20:60.19:0,60,5413	1/1:3,7:10:15.05:864,15,0	0/0:18,0:18:51.18:0,51,4358	0/0:40,0:40:99:0,120,10332	0/0:36,0:36:99:0,108,9569	0/0:22,0:22:66.23:0,66,6044	0/0:24,0:24:66.20:0,66,5254	0/0:33,0:33:96.33:0,96,8718	0/0:16,0:16:48.16:0,48,4333	0/0:32,0:32:96.33:0,96,8631	0/0:22,0:22:66.23:0,66,5662	0/0:19,0:19:57.20:0,57,5202	0/0:8,0:8:24.04:0,24,2029	0/0:30,0:30:87.30:0,87,6522	0/0:26,0:26:78.27:0,78,6895	0/0:35,0:35:99:0,102,8827	0/0:20,0:20:60.21:0,60,5948	0/0:26,0:26:78.27:0,78,6875	0/0:20,0:20:60.21:0,60,5462	0/0:25,0:25:75.26:0,75,6843	0/1:7,18:25:99:2826,0,553	0/0:35,0:35:99:0,102,9686	1/1:2,3:5:6.02:357,6,0
chr10	82286133	.	AT	A	489.31	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.841;DP=723;FS=2.132;HRun=2;HaplotypeScore=66.7611;InbreedingCoeff=0.9979;MQ=90.76;MQ0=0;MQRankSum=-3.024;QD=32.62;ReadPosRankSum=0.090;VQSLOD=3.4582;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,1892	0/0:15,0:15:42.13:0,42,609	0/0:31,0:31:90.26:0,90,1276	0/0:26,0:27:75.02:0,75,1043	0/0:25,0:25:72.24:0,72,1056	0/0:23,0:23:69.23:0,69,1033	1/1:0,15:15:45.15:584,45,0	0/0:40,0:40:99:0,120,1731	0/0:35,0:35:99:0,105,1527	0/0:26,0:26:75.25:0,75,1117	0/0:17,0:17:51.17:0,51,764	0/0:20,0:20:60.19:0,60,876	0/0:27,0:27:81.25:0,81,1168	0/0:28,0:28:84.28:0,84,1258	0/0:30,0:30:90.30:0,90,1332	0/0:21,0:21:63.21:0,63,944	0/0:29,0:29:87.26:0,87,1262	0/0:9,0:9:27.09:0,27,397	0/0:30,0:30:90.28:0,90,1309	0/0:30,0:30:90.28:0,90,1294	0/0:31,0:31:93.31:0,93,1391	0/0:26,0:26:78.25:0,78,1145	0/0:19,0:19:56.96:0,57,783	0/0:35,0:35:99:0,105,1548	0/0:21,0:21:63.18:0,63,903	0/0:27,0:27:81.27:0,81,1206	0/0:33,0:33:99:0,99,1476	0/0:9,0:9:27.09:0,27,404
chr10	82287850	.	G	GA	10232.91	PASS	AB=0.571;AC=35;AF=0.648;AN=54;BaseQRankSum=7.380;DP=684;FS=3.589;HRun=1;HaplotypeScore=64.5250;InbreedingCoeff=0.8648;MQ=38.34;MQ0=49;MQRankSum=-13.817;QD=25.84;ReadPosRankSum=-1.489;VQSLOD=4.3431;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,5:50:99:0,123,1578	0/1:2,6:8:26.84:123,0,27	0/0:12,0:1:3.01:0,3,36	./.	1/1:5,24:25:36.12:538,36,0	1/1:2,19:18:45.15:673,45,0	0/0:19,0:19:42.12:0,42,531	0/0:39,0:14:30.10:0,30,389	1/1:1,19:17:39.10:559,39,0	1/1:6,16:19:9.25:634,9,0	1/1:4,22:26:18.24:719,18,0	1/1:5,20:22:45.08:624,45,0	1/1:2,12:13:36.05:481,36,0	1/1:1,15:15:36.12:538,36,0	1/1:2,33:33:81.20:1154,81,0	1/1:2,23:23:51.17:763,51,0	1/1:2,19:14:36.12:539,36,0	1/1:7,9:14:15.94:227,16,0	0/0:19,0:11:33.11:0,33,428	0/0:42,0:38:99:0,111,1426	1/1:5,8:11:11.95:130,12,0	1/1:6,23:27:57.11:803,57,0	1/1:5,26:28:57.15:827,57,0	1/1:5,13:15:18.06:269,18,0	1/1:4,23:26:9.29:634,9,0	0/0:35,1:34:57.44:0,57,1238	0/0:35,0:31:90.29:0,90,1168	0/0:10,0:9:24.04:0,24,294
chr10	82288063	.	C	CACA	8395.57	PASS	AB=0.793;AC=36;AF=0.643;AN=56;BaseQRankSum=13.503;DP=562;FS=4.669;HRun=0;HaplotypeScore=84.2849;InbreedingCoeff=0.6559;MQ=38.42;MQ0=34;MQRankSum=-11.025;QD=24.62;ReadPosRankSum=0.621;VQSLOD=4.6546;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:38:75.26:0,75,1249	1/1:3,8:8:12.04:271,12,0	0/0:16,0:1:0.89:0,1,2	0/1:16,0:2:0:0,0,0	1/1:4,9:12:15.05:339,15,0	1/1:2,18:17:30.03:581,30,0	0/0:23,0:17:30.10:0,30,490	0/0:43,0:20:48.15:0,48,758	1/1:1,22:19:30.10:678,30,0	1/1:3,10:10:27.09:604,27,0	1/1:1,8:7:6.02:135,6,0	1/1:2,17:13:27.09:610,27,0	1/1:2,18:16:45.12:966,45,0	1/1:0,17:10:18.03:360,18,0	1/1:2,17:19:36.08:766,36,0	1/1:1,20:13:27.09:610,27,0	0/1:9,12:16:19.89:521,0,20	1/1:2,10:9:6.02:136,6,0	0/0:24,0:17:42.13:0,42,674	0/0:28,0:27:69.24:0,69,1146	1/1:5,3:8:6.02:136,6,0	1/1:4,19:16:27.09:610,27,0	1/1:1,12:10:24.08:542,24,0	0/1:4,8:9:37.94:191,0,38	1/1:0,16:12:15.01:291,15,0	0/1:28,2:29:48.61:49,0,1260	0/0:26,0:23:63.22:0,63,1048	0/0:20,0:19:54.18:0,54,899
chr10	82288316	.	T	TCACACA	477.35	PASS	AB=1.000;AC=13;AF=0.295;AN=44;BaseQRankSum=4.698;DP=346;FS=19.985;HRun=0;HaplotypeScore=78.7522;InbreedingCoeff=0.0763;MQ=31.80;MQ0=43;MQRankSum=0.896;QD=3.31;ReadPosRankSum=-1.621;VQSLOD=0.0582;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:29:42.55:43,0,72	1/1:5,0:4:2.37:8,2,0	./.	./.	0/1:6,0:3:0:0,0,0	0/0:16,0:18:4.71:0,5,54	0/0:16,0:12:2.91:0,3,19	0/0:18,0:9:19.77:0,20,216	0/1:16,0:13:0.12:0,0,0	0/0:6,0:3:5.16:0,5,31	./.	1/1:15,0:14:6:93,6,0	0/1:14,0:10:82.70:83,0,118	0/0:14,0:13:3.48:0,3,74	0/1:16,0:14:33.12:33,0,46	1/1:11,0:10:3.01:43,3,0	0/0:14,0:10:6.02:0,6,92	0/0:10,0:7:2.97:0,3,317	0/0:11,0:6:18.06:0,18,324	0/0:15,0:15:13.46:0,13,245	./.	./.	./.	0/0:12,5:15:2.94:0,3,20	0/0:11,0:7:3:0,3,26	0/1:17,0:13:99:177,0,155	0/0:21,0:20:44.82:0,45,696	0/1:11,0:11:31.15:119,0,31
chr10	82288318	.	T	TCACACA	689.28	PASS	AB=1.000;AC=15;AF=0.341;AN=44;BaseQRankSum=3.621;DP=341;FS=26.905;HRun=0;HaplotypeScore=75.6444;InbreedingCoeff=0.1931;MQ=31.20;MQ0=44;MQRankSum=1.533;QD=3.98;ReadPosRankSum=-0.793;VQSLOD=0.0466;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:28:9.41:9,0,75	1/1:5,0:4:3.01:44,3,0	./.	./.	0/1:7,0:4:0:0,0,0	0/0:22,0:18:4.20:0,4,15	0/1:15,0:11:0:0,0,0	0/0:17,0:8:21.84:0,22,210	0/1:16,0:13:0:0,0,0	0/0:6,0:3:7.94:0,8,39	./.	1/1:15,0:14:6.02:98,6,0	0/1:14,0:10:48.47:117,0,48	0/0:15,0:14:3:0,3,36	0/1:16,0:14:14.36:103,0,14	1/1:10,0:9:2.98:22,3,0	0/0:9,5:10:5.94:0,6,45	0/0:10,0:7:18.01:0,18,225	0/0:12,0:6:18.02:0,18,307	0/0:15,0:15:12.95:0,13,190	./.	./.	./.	0/1:16,0:14:0:0,0,0	0/0:9,0:5:0:0,0,0	0/1:17,0:13:74.64:225,0,75	0/0:20,0:19:38.84:0,39,435	0/1:10,0:10:6.84:190,0,7
chr10	82288581	.	C	CAT	1617.87	PASS	AB=1.000;AC=15;AF=0.441;AN=34;BaseQRankSum=-3.554;DP=294;FS=2.242;HRun=0;HaplotypeScore=44.0836;InbreedingCoeff=0.7032;MQ=52.49;MQ0=8;MQRankSum=0.759;QD=18.81;ReadPosRankSum=0.507;VQSLOD=3.1130;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:72.18:0,72,879	./.	0/0:15,0:11:15.56:0,16,235	0/0:18,0:9:20.24:0,20,216	./.	0/0:1,0:1:2.80:0,3,13	0/0:19,0:19:54.16:0,54,673	0/0:32,1:33:30.99:0,31,904	./.	./.	./.	1/1:4,0:4:3:25,3,0	1/1:4,0:4:2.97:20,3,0	./.	./.	./.	0/1:13,0:13:5.23:38,0,5	1/1:10,0:9:8.90:63,9,0	0/0:18,0:14:24.08:0,24,306	0/0:15,0:14:33.11:0,33,419	./.	./.	./.	1/1:8,0:8:5.99:49,6,0	1/1:5,0:4:2.99:23,3,0	1/1:4,21:27:66.20:1041,66,0	0/0:25,0:25:51.10:0,51,617	1/1:0,15:15:30.10:502,30,0
chr10	82288857	.	A	ACAGACC	12361.29	PASS	AB=0.952;AC=35;AF=0.648;AN=54;BaseQRankSum=-3.156;DP=419;FS=11.857;HRun=0;HaplotypeScore=79.3830;InbreedingCoeff=0.8416;MQ=50.18;MQ0=0;MQRankSum=-14.246;QD=54.22;ReadPosRankSum=2.944;VQSLOD=4.0861;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,117,2748	1/1:0,2:1:3.01:108,3,0	0/0:14,0:12:34.67:0,35,781	0/0:24,0:17:44.98:0,45,994	1/1:3,3:6:6.01:134,6,0	1/1:4,12:14:30.10:886,30,0	0/0:29,0:29:84.25:0,84,1908	0/0:25,0:25:69.21:0,69,1487	1/1:1,9:9:18.02:559,18,0	1/1:5,2:7:21.04:646,21,0	1/1:0,4:4:9.03:323,9,0	1/1:4,18:22:51.13:1587,51,0	1/1:1,7:7:15.05:482,15,0	1/1:3,13:12:24.08:810,24,0	1/1:2,8:10:27.09:885,27,0	1/1:1,18:21:45.15:1618,45,0	1/1:4,13:20:42.62:1510,43,0	1/1:7,5:16:27.06:806,27,0	0/0:23,0:22:63.21:0,63,1406	0/0:6,0:6:15.05:0,15,361	1/1:4,9:16:18.53:647,19,0	1/1:2,2:5:8.44:161,8,0	./.	1/1:4,12:18:27.04:826,27,0	1/1:0,4:4:9.03:323,9,0	0/1:19,1:20:50.73:51,0,1108	0/0:17,0:17:51.18:0,51,1226	0/0:9,0:9:27.09:0,27,649
chr10	82289088	.	TA	T	6353.79	PASS	AB=0.941;AC=37;AF=0.661;AN=56;BaseQRankSum=12.697;DP=386;FS=16.846;HRun=6;HaplotypeScore=49.4164;InbreedingCoeff=0.9271;MQ=56.30;MQ0=6;MQRankSum=1.039;QD=26.81;ReadPosRankSum=2.821;VQSLOD=3.3923;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.17:0,51,671	1/1:0,6:5:15.04:161,15,0	0/0:16,2:5:9.03:0,9,116	0/1:15,1:5:3.08:3,0,130	1/1:0,18:18:51.13:548,51,0	1/1:0,12:12:33.08:355,33,0	0/0:8,0:8:21.07:0,21,276	0/0:21,0:22:63.06:0,63,791	1/1:1,7:8:21.05:226,21,0	1/1:1,13:13:39.10:419,39,0	1/1:1,16:17:48.12:516,48,0	1/1:1,13:14:39.10:419,39,0	1/1:1,11:12:33.08:355,33,0	1/1:0,13:13:36.09:387,36,0	1/1:1,12:13:33.08:355,33,0	1/1:0,14:14:39.10:419,39,0	1/1:0,15:15:45.11:484,45,0	1/1:1,6:7:18.05:193,18,0	0/0:18,0:16:48.16:0,48,631	0/0:22,0:22:63.20:0,63,824	1/1:0,5:5:15.04:161,15,0	1/1:0,16:16:42.10:451,42,0	1/1:3,11:14:30.07:322,30,0	1/1:0,7:7:15.04:161,15,0	1/1:1,15:16:39.10:419,39,0	0/0:21,1:22:30.94:0,31,744	0/0:15,0:15:45.10:0,45,558	0/0:6,0:6:18.06:0,18,237
chr10	82290826	.	TA	T	8759.60	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=9.204;DP=505;FS=3.201;HRun=7;HaplotypeScore=63.5879;InbreedingCoeff=0.9885;MQ=68.59;MQ0=3;MQRankSum=-0.331;QD=22.93;ReadPosRankSum=4.657;VQSLOD=4.7851;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,29:32:71.47:759,71,0	1/1:1,4:5:12.03:122,12,0	0/0:14,0:14:23.91:0,24,272	0/0:10,0:8:14.62:0,15,148	1/1:3,35:38:93.13:927,93,0	1/1:4,17:21:45.10:459,45,0	0/0:19,0:19:48.11:0,48,586	0/0:24,0:22:42.11:0,42,513	1/1:0,11:11:27.06:275,27,0	1/1:2,13:15:39.09:398,39,0	1/1:2,14:16:30.06:306,30,0	1/1:2,16:19:44.13:434,44,0	1/1:2,15:17:33.07:337,33,0	1/1:1,12:12:30.07:306,30,0	1/1:3,22:25:54.12:551,54,0	1/1:2,12:14:27.06:275,27,0	1/1:4,31:34:87.19:887,87,0	1/1:1,7:8:21.05:214,21,0	0/0:25,0:25:66.20:0,66,819	0/0:15,0:15:45.14:0,45,566	1/1:1,16:17:36.08:367,36,0	1/1:1,12:13:30.06:306,30,0	1/1:4,20:24:44.97:459,45,0	1/1:1,17:18:36.08:367,36,0	1/1:2,19:21:45.10:459,45,0	1/1:1,12:13:33.07:337,33,0	0/0:16,0:14:42.13:0,42,527	1/1:0,7:7:21.05:214,21,0
chr10	82290921	.	C	CA	3224.61	PASS	AB=0.811;AC=41;AF=0.732;AN=56;BaseQRankSum=-0.245;DP=502;FS=22.022;HRun=15;HaplotypeScore=83.7067;InbreedingCoeff=0.0567;MQ=45.23;MQ0=26;MQRankSum=-1.246;QD=6.99;ReadPosRankSum=-2.022;VQSLOD=0.3861;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:23:21.88:0,22,64	0/1:3,3:6:6.03:64,0,6	0/1:9,0:7:5.35:32,0,5	0/0:3,0:3:0.44:0,0,2	1/1:18,7:24:7.85:152,8,0	0/1:17,2:20:14.09:70,0,14	0/0:11,0:15:3.82:0,4,107	1/1:16,1:27:35.49:180,35,0	1/1:9,11:19:15.45:127,15,0	1/1:9,11:21:31.79:274,32,0	0/1:18,5:25:24.07:138,0,24	0/1:7,2:9:18.05:71,0,18	1/1:14,3:17:1.05:100,1,0	0/1:13,5:15:2.53:114,0,3	1/1:3,9:11:20.98:176,21,0	1/1:5,7:15:29.65:227,30,0	1/1:20,10:23:5.45:169,5,0	0/1:12,1:8:21.28:42,0,21	1/1:6,0:13:24.98:126,25,0	1/1:11,0:30:51.30:281,51,0	0/1:10,3:12:15.87:76,0,16	1/1:8,6:15:20.14:196,20,0	1/1:13,8:20:9.22:164,9,0	0/1:10,5:17:25.79:99,0,26	1/1:13,6:19:32.83:255,33,0	1/1:25,0:26:29.21:155,29,0	1/1:5,1:14:8.52:42,9,0	1/1:7,0:5:8.65:49,9,0
chr10	82292273	.	TG	T	8112.38	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=2.343;DP=494;FS=2.806;HRun=9;HaplotypeScore=63.2767;InbreedingCoeff=0.8760;MQ=77.51;MQ0=0;MQRankSum=-2.033;QD=20.49;ReadPosRankSum=5.593;VQSLOD=5.1482;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:5,22:27:57.03:521,57,0	1/1:3,4:7:18.01:164,18,0	0/0:19,1:21:12:0,12,306	0/1:15,0:15:11.61:12,0,165	1/1:1,7:8:21.01:192,21,0	1/1:2,9:11:27.01:247,27,0	1/1:1,20:21:54.03:494,54,0	0/0:24,0:24:42.11:0,42,465	1/1:3,11:14:39:352,39,0	1/1:5,17:22:48.02:439,48,0	1/1:2,8:10:26.95:237,27,0	1/1:4,12:16:42.02:382,42,0	1/1:2,12:14:39.02:357,39,0	1/1:0,12:12:36.02:329,36,0	1/1:1,14:15:42.02:384,42,0	1/1:5,10:15:24.01:220,24,0	1/1:2,26:29:74.07:665,74,0	1/1:1,12:13:39.02:357,39,0	0/0:17,1:18:17.62:0,18,431	0/0:15,0:15:33.10:0,33,380	1/1:2,31:33:90.04:823,90,0	1/1:3,17:20:39.01:357,39,0	1/1:7,16:23:60.01:542,60,0	1/1:1,19:20:57.03:522,57,0	1/1:1,16:17:39.02:357,39,0	1/1:8,0:25:35.50:123,35,0	0/0:20,0:20:51.15:0,51,587	1/1:0,0:8:12.22:36,12,0
chr10	82292353	.	CGGG	C	8323.23	PASS	AB=0.564;AC=44;AF=0.786;AN=56;BaseQRankSum=-9.539;DP=381;FS=6.446;HRun=11;HaplotypeScore=77.5794;InbreedingCoeff=0.7128;MQ=72.53;MQ0=0;MQRankSum=-2.554;QD=26.59;ReadPosRankSum=3.605;VQSLOD=3.7196;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:22:38:0,38,283	1/1:1,6:7:18.06:237,18,0	0/0:17,0:17:34.24:0,34,379	0/0:8,0:7:9.18:0,9,60	1/1:1,12:13:24.07:315,24,0	1/1:0,7:7:18.05:237,18,0	1/1:3,10:13:27.08:355,27,0	0/1:2,1:9:12.01:29,0,12	1/1:5,15:20:42:551,42,0	1/1:2,11:13:36.11:470,36,0	1/1:1,10:11:27.09:354,27,0	1/1:1,14:15:39.12:512,39,0	1/1:2,14:16:29.68:394,30,0	1/1:0,9:9:21.07:276,21,0	1/1:1,16:17:45.14:591,45,0	1/1:1,11:12:28.39:391,28,0	1/1:11,8:19:26.99:335,27,0	1/1:3,8:11:21.04:276,21,0	0/0:5,0:11:3.37:0,3,29	0/0:4,0:9:6.80:0,7,15	1/1:3,18:21:51.15:670,51,0	1/1:5,8:13:18.02:236,18,0	1/1:1,13:14:33.09:433,33,0	1/1:2,18:20:54.17:710,54,0	1/1:8,11:19:23.74:314,24,0	1/1:7,9:16:33.07:418,33,0	0/1:3,1:13:14.93:22,0,15	1/1:0,5:5:15.05:197,15,0
chr10	82293450	.	T	TGG	312.67	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-3.764;DP=446;FS=4.891;HRun=10;HaplotypeScore=110.4242;InbreedingCoeff=0.6056;MQ=75.47;MQ0=0;MQRankSum=1.071;QD=4.96;ReadPosRankSum=-3.952;VQSLOD=-0.7164;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:19:3.78:42,4,0	0/0:5,0:5:2.66:0,3,11	0/0:19,0:18:15.75:0,16,128	0/0:14,0:12:5.83:0,6,108	0/0:18,0:18:13.42:0,13,52	0/0:16,0:16:15.58:0,16,63	1/1:8,15:24:26.33:334,26,0	0/0:11,0:11:11.49:0,11,115	0/0:25,0:25:9.25:0,9,83	0/0:15,0:15:7.61:0,8,38	0/0:10,0:10:2.53:0,3,10	0/0:18,0:18:20.77:0,21,82	0/0:21,0:21:27.87:0,28,113	0/0:19,0:19:10.09:0,10,42	0/0:32,0:32:14.15:0,14,110	0/0:23,0:23:26.95:0,27,111	0/0:21,0:21:13.01:0,13,53	0/0:16,0:16:10.38:0,10,46	0/0:10,0:10:18.04:0,18,183	0/0:15,0:15:20.97:0,21,213	0/0:16,0:16:5.16:0,5,21	0/1:11,0:11:0:0,0,0	0/0:8,0:8:5.65:0,6,34	0/0:18,0:17:13.04:0,13,53	0/0:18,0:18:7.85:0,8,32	1/1:7,0:7:5.96:44,6,0	0/0:14,0:14:26.91:0,27,248	1/1:2,0:2:2.99:24,3,0
chr10	82293455	.	GGGGGGCGA	G	4689.50	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=7.127;DP=414;FS=20.954;HRun=0;HaplotypeScore=106.4165;InbreedingCoeff=0.7442;MQ=74.76;MQ0=0;MQRankSum=-10.078;QD=15.63;ReadPosRankSum=4.038;VQSLOD=1.6369;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:21.07:0,21,679	1/1:3,3:6:3.01:77,3,0	0/0:18,0:16:33.94:0,34,742	0/1:15,0:13:44.07:44,0,620	1/1:18,0:18:27.95:317,28,0	1/1:20,1:21:21.07:314,21,0	0/0:23,0:23:32.70:0,33,1085	0/0:14,0:14:33.10:0,33,1122	1/1:19,0:19:30.03:377,30,0	1/1:12,0:12:17.94:200,18,0	1/1:9,0:9:5.93:57,6,0	1/1:14,0:14:24.08:317,24,0	1/1:21,1:22:36.57:511,37,0	1/1:19,0:19:11.75:195,12,0	1/1:23,1:24:42.08:586,42,0	1/1:18,0:18:33.09:435,33,0	1/1:17,1:18:20.99:276,21,0	1/1:3,13:16:18.06:394,18,0	0/0:9,0:9:18.03:0,18,849	0/0:16,0:16:42.14:0,42,1494	1/1:19,0:19:6.48:80,6,0	1/1:11,0:11:2.97:20,3,0	1/1:6,5:11:3.01:78,3,0	1/1:15,1:15:14.65:235,15,0	1/1:11,1:12:12.47:177,12,0	0/0:5,0:5:3.01:0,3,110	0/0:11,0:11:30.07:0,30,1027	0/0:1,0:1:3.01:0,3,124
chr10	82293456	.	GGGGGCGA	G	7057.62	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=4.594;DP=402;FS=24.320;HRun=0;HaplotypeScore=89.3418;InbreedingCoeff=0.6433;MQ=73.17;MQ0=0;MQRankSum=-10.400;QD=23.76;ReadPosRankSum=3.794;VQSLOD=2.8164;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:21.06:0,21,587	1/1:6,0:6:3.01:53,3,0	0/0:16,0:14:28.79:0,29,653	0/1:15,0:13:22.90:23,0,550	1/1:3,14:17:28.36:477,28,0	1/1:6,14:20:21.07:449,21,0	0/0:21,0:21:32.65:0,33,951	0/0:14,0:14:36.08:0,36,1013	1/1:1,18:19:33.07:698,33,0	1/1:4,7:11:19.23:328,19,0	1/1:2,7:9:6.02:108,6,0	1/1:1,13:14:24.08:572,24,0	1/1:6,15:21:37.48:839,37,0	1/1:5,14:19:11.89:267,12,0	1/1:3,21:24:46:998,46,0	1/1:1,17:18:34:788,34,0	1/1:5,12:17:20.99:379,21,0	1/1:16,0:16:18.06:296,18,0	0/0:9,0:9:18.02:0,18,762	0/0:16,0:16:42.14:0,42,1333	1/1:2,16:18:5.96:143,6,0	1/1:5,6:11:2.97:20,3,0	0/1:11,0:11:15.61:47,0,16	1/1:4,12:16:14.81:338,15,0	1/1:5,6:11:12.47:216,12,0	0/1:4,0:4:18.12:18,0,91	0/0:11,0:11:30.10:0,30,950	0/0:1,0:1:3.01:0,3,110
chr10	82293460	.	GCGA	G	3200.09	PASS	AB=0.980;AC=37;AF=0.661;AN=56;BaseQRankSum=8.454;DP=350;FS=20.056;HRun=0;HaplotypeScore=72.2317;InbreedingCoeff=0.6141;MQ=76.23;MQ0=0;MQRankSum=-10.446;QD=12.80;ReadPosRankSum=3.813;VQSLOD=1.7476;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:21.06:0,21,300	1/1:3,0:3:3:29,3,0	0/0:15,0:13:3.09:0,3,282	0/1:15,1:14:27.33:27,0,397	1/1:15,1:16:27.93:274,28,0	1/1:15,0:16:21.05:221,21,0	0/0:21,0:21:32.87:0,33,470	0/0:14,0:14:36.10:0,36,622	1/1:19,0:19:33.04:327,33,0	1/1:7,0:7:17.97:162,18,0	1/1:7,0:7:6.02:68,6,0	1/1:13,1:14:24.05:245,24,0	1/1:16,2:18:36.55:366,37,0	1/1:15,0:15:12.03:121,12,0	1/1:22,0:22:45.05:442,45,0	1/1:17,0:17:33.07:336,33,0	1/1:13,0:13:20.98:192,21,0	1/1:14,0:14:18.04:201,18,0	0/0:10,0:10:20.37:0,20,461	0/0:15,0:15:45.14:0,45,794	1/1:16,0:16:6:61,6,0	1/1:6,0:6:2.97:20,3,0	0/1:8,0:8:18.93:23,0,19	1/1:13,0:12:14.80:151,15,0	1/1:7,1:8:11.99:110,12,0	0/1:2,0:2:18.15:18,0,44	0/0:10,0:10:29.98:0,30,514	0/0:1,0:1:3.01:0,3,62
chr10	82294790	.	G	GGTGTGTGTGTGT	5664.94	PASS	AB=0.988;AC=40;AF=0.741;AN=54;BaseQRankSum=3.706;DP=551;FS=1.424;HRun=0;HaplotypeScore=204.9088;InbreedingCoeff=0.5246;MQ=66.62;MQ0=14;MQRankSum=-4.762;QD=14.09;ReadPosRankSum=2.828;VQSLOD=3.5393;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:58.95:59,0,376	./.	0/1:54,0:29:60.44:60,0,134	0/0:58,0:27:16.75:0,17,273	1/1:18,0:16:6.01:68,6,0	1/1:14,0:13:6:78,6,0	1/1:14,0:13:9.03:201,9,0	0/0:30,0:29:47.82:0,48,908	1/1:18,0:16:11.87:398,12,0	1/1:17,0:16:36.11:917,36,0	1/1:10,0:10:3.01:57,3,0	0/1:18,0:17:0:0,0,0	1/1:12,0:12:9.03:246,9,0	1/1:13,0:13:5.97:59,6,0	1/1:13,0:13:2.99:147,3,0	1/1:14,0:13:9.03:256,9,0	1/1:15,0:15:9:266,9,0	1/1:3,0:7:6.02:211,6,0	0/0:16,0:19:35.91:0,36,853	0/0:15,0:16:36.09:0,36,959	0/1:19,0:18:0.13:0,0,0	1/1:23,0:22:9.02:229,9,0	1/1:11,0:11:6.02:102,6,0	1/1:20,0:18:3.01:71,3,0	1/1:19,0:18:12.04:419,12,0	1/1:25,0:24:45.10:1316,45,0	0/0:20,0:19:42.14:0,42,1157	1/1:6,13:20:9.03:504,9,0
chr10	82294813	.	GTC	G	229.88	PASS	AB=0.992;AC=22;AF=0.393;AN=56;BaseQRankSum=2.502;DP=465;FS=9.721;HRun=0;HaplotypeScore=111.4258;InbreedingCoeff=-0.0958;MQ=49.52;MQ0=23;MQRankSum=-0.181;QD=0.85;ReadPosRankSum=-4.719;VQSLOD=-0.3998;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,1:19:0.47:0,0,174	0/0:5,0:5:2.97:0,3,21	0/1:35,0:12:54.74:55,0,101	0/0:50,1:21:4.69:0,5,182	0/1:18,0:15:17.11:17,0,22	1/1:9,0:7:3.46:24,3,0	0/1:13,1:13:12.26:12,0,62	0/0:32,0:28:80.73:0,81,780	0/1:13,0:11:11.03:19,0,11	0/1:16,0:15:83.61:84,0,152	1/1:8,1:9:2.90:19,3,0	0/0:13,0:12:5.88:0,6,36	0/1:9,0:8:21.03:21,0,47	0/1:11,0:11:5.06:32,0,5	0/0:10,1:11:0:0,0,0	0/1:17,0:15:12.14:18,0,12	0/1:8,0:8:0.05:0,0,0	0/1:5,0:5:11.94:12,0,50	0/0:21,0:20:25.96:0,26,535	0/0:17,0:17:34.66:0,35,614	0/1:14,0:10:3.21:3,0,16	1/1:21,0:20:1.91:23,2,0	0/1:8,0:8:11:11,0,38	0/0:16,1:13:1.13:0,1,21	1/1:15,0:14:2.46:19,2,0	0/1:29,0:28:3.83:4,0,478	0/0:18,0:17:47.99:0,48,702	0/0:10,0:10:14.92:0,15,119
chr10	82294878	.	TTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	T	301.03	PASS	AC=18;AF=0.409;AN=44;BaseQRankSum=3.979;DP=217;FS=12.631;HRun=0;HaplotypeScore=139.9397;InbreedingCoeff=0.5995;MQ=37.02;MQ0=45;MQRankSum=-3.928;QD=7.53;ReadPosRankSum=-0.679;VQSLOD=1.9349;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:6:18.06:0,18,411	1/1:1,0:1:2.90:16,3,0	0/0:11,0:5:15.05:0,15,189	0/0:22,0:9:27.09:0,27,358	./.	1/1:3,5:5:3.01:269,3,0	0/0:8,0:5:6.02:0,6,176	0/0:20,0:19:54.18:0,54,1543	0/0:3,0:3:1.08:0,1,3	1/1:4,0:4:6.01:64,6,0	./.	1/1:2,0:2:2.97:20,3,0	1/1:6,0:5:2.97:20,3,0	1/1:7,0:6:1.82:5,2,0	0/0:0,4:4:1.55:0,2,4	0/0:4,4:6:0.31:0,0,1	./.	./.	0/0:15,0:13:39.13:0,39,944	0/0:20,0:18:49.09:0,49,2197	./.	1/1:5,0:5:2.46:19,2,0	1/1:3,0:3:1.27:3,1,0	./.	1/1:4,0:3:2.97:20,3,0	0/0:17,0:16:45.11:0,45,1637	0/0:11,0:8:17.26:0,17,643	0/0:11,0:8:18.02:0,18,1345
chr10	82303991	.	C	CATATAT	5215.74	PASS	AB=1.000;AC=43;AF=0.860;AN=50;BaseQRankSum=-5.403;DP=256;FS=0.000;HRun=0;HaplotypeScore=60.4847;InbreedingCoeff=0.2673;MQ=66.07;MQ0=4;MQRankSum=-2.941;QD=23.28;ReadPosRankSum=0.912;VQSLOD=4.2414;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,6:11:3.01:101,3,0	1/1:0,2:4:6.02:180,6,0	0/0:7,0:4:5.83:0,6,46	0/1:12,0:7:7.47:7,0,15	1/1:5,3:10:3.01:101,3,0	1/1:8,0:8:9.03:179,9,0	1/1:3,4:7:3.01:101,3,0	1/1:14,13:28:46.29:973,46,0	1/1:1,5:8:15.05:442,15,0	1/1:8,0:9:4.57:79,5,0	1/1:3,0:6:6.02:158,6,0	1/1:0,1:2:3.01:101,3,0	./.	1/1:1,2:3:6.02:201,6,0	1/1:2,0:7:9.03:117,9,0	1/1:2,3:6:3.01:101,3,0	1/1:4,16:22:23.75:654,24,0	1/1:7,7:18:18.05:405,18,0	1/1:7,7:15:20.10:429,20,0	1/1:0,3:3:6.02:200,6,0	0/1:4,0:4:0:0,0,0	./.	1/1:4,0:4:6.02:147,6,0	./.	1/1:5,4:17:15.05:318,15,0	0/1:8,0:7:7.36:7,0,102	1/1:4,5:10:8.86:215,9,0	0/0:19,0:18:2.98:0,3,217
chr10	82304356	.	TCA	T	539.55	PASS	AB=0.949;AC=27;AF=0.711;AN=38;BaseQRankSum=1.427;DP=435;FS=10.157;HRun=0;HaplotypeScore=63.2468;InbreedingCoeff=0.4043;MQ=70.26;MQ0=9;MQRankSum=0.173;QD=2.36;ReadPosRankSum=0.574;VQSLOD=0.3468;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:2.97:0,3,20	0/1:5,0:5:0.01:0,0,0	./.	./.	./.	1/1:16,0:16:5.70:28,6,0	0/0:14,0:14:11.95:0,12,110	./.	1/1:7,3:10:6.49:64,6,0	0/1:14,0:13:0:0,0,0	./.	1/1:10,1:11:3:32,3,0	1/1:13,3:16:3:32,3,0	1/1:13,3:16:2.87:32,3,0	1/1:11,1:11:3.01:31,3,0	1/1:8,6:14:9.02:95,9,0	1/1:20,3:25:8.69:60,9,0	1/1:9,4:13:9.02:95,9,0	./.	./.	1/1:18,0:18:2.67:11,3,0	./.	./.	0/1:23,4:28:11.76:66,0,12	1/1:7,3:9:3:32,3,0	0/0:21,0:21:20.97:0,21,201	1/1:13,0:21:17.04:84,17,0	0/0:3,0:5:3:0,3,26
chr10	82304700	.	GGT	G	70.64	PASS	AB=0.944;AC=10;AF=0.227;AN=44;BaseQRankSum=4.181;DP=469;FS=10.868;HRun=0;HaplotypeScore=64.5629;InbreedingCoeff=-0.0108;MQ=58.48;MQ0=13;MQRankSum=-2.489;QD=0.54;ReadPosRankSum=2.448;VQSLOD=0.4751;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:39.42:0,39,381	./.	./.	./.	0/0:8,0:8:3:0,3,25	0/0:16,0:16:6.01:0,6,69	0/0:20,0:20:7.24:0,7,70	./.	0/0:16,0:15:14.96:0,15,118	0/0:16,0:13:9.01:0,9,83	0/0:9,0:8:6:0,6,66	0/1:13,2:15:49.45:49,0,77	0/1:12,1:13:20.24:20,0,79	0/1:15,1:15:42.37:42,0,118	0/0:16,0:15:9:0,9,91	0/1:20,1:21:17.36:17,0,99	0/1:23,1:22:13.86:14,0,110	0/0:14,0:14:8.98:0,9,72	0/0:21,0:21:6.01:0,6,55	1/1:2,1:3:3.01:32,3,0	0/1:30,0:29:2.26:2,0,163	0/0:17,0:17:12:0,12,121	0/0:7,0:7:3.01:0,3,44	0/0:25,0:25:18:0,18,203	./.	./.	0/0:14,0:13:6:0,6,68	1/1:6,0:7:2.84:14,3,0
chr10	82306058	.	T	TAA	896.84	PASS	AB=0.709;AC=20;AF=0.526;AN=38;BaseQRankSum=5.309;DP=134;FS=0.000;HRun=1;HaplotypeScore=31.1321;InbreedingCoeff=0.4872;MQ=24.19;MQ0=43;MQRankSum=-1.931;QD=16.92;ReadPosRankSum=3.202;VQSLOD=1.0521;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:6:9.03:0,9,137	1/1:0,1:1:3.01:55,3,0	./.	./.	./.	./.	0/0:5,0:2:6.02:0,6,91	0/0:15,0:13:36.05:0,36,501	./.	1/1:2,4:5:12.04:220,12,0	1/1:9,1:3:3.01:55,3,0	./.	1/1:3,0:2:3.01:46,3,0	./.	1/1:1,2:3:6.02:110,6,0	./.	1/1:4,3:3:9.03:165,9,0	0/1:7,2:3:36.70:101,0,37	0/0:12,0:8:24.08:0,24,360	0/0:8,1:6:9.03:0,9,137	1/1:1,2:2:6.02:110,6,0	1/1:2,0:1:2.97:20,3,0	./.	0/1:1,2:2:5.63:49,0,6	1/1:4,2:3:6.02:110,6,0	0/0:10,0:6:9.03:0,9,137	0/0:7,0:5:8.99:0,9,112	0/0:4,0:1:3.01:0,3,46
chr10	82306134	.	GA	G	3624.69	PASS	AB=0.705;AC=35;AF=0.625;AN=56;BaseQRankSum=7.249;DP=289;FS=23.581;HRun=10;HaplotypeScore=41.2126;InbreedingCoeff=0.7086;MQ=58.00;MQ0=3;MQRankSum=-5.708;QD=20.95;ReadPosRankSum=6.213;VQSLOD=2.2622;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.08:0,45,477	1/1:0,2:2:6:52,6,0	0/1:16,1:6:36.98:37,0,62	0/0:13,0:6:14.98:0,15,144	1/1:0,8:8:20.99:182,21,0	0/1:1,4:5:21.18:66,0,21	0/0:9,1:10:4.02:0,4,264	0/0:19,0:19:51.12:0,51,555	1/1:0,8:8:24:208,24,0	1/1:0,10:10:29.99:260,30,0	1/1:0,15:15:44.99:390,45,0	1/1:0,11:11:32.99:286,33,0	1/1:1,8:8:21:182,21,0	1/1:0,8:8:24:208,24,0	1/1:0,2:2:6:52,6,0	1/1:1,11:12:32.99:286,33,0	1/1:1,10:11:29.98:260,30,0	0/1:3,5:6:3.40:112,0,3	0/0:12,0:11:24.02:0,24,246	0/0:16,0:17:31.98:0,32,339	1/1:1,5:6:9:78,9,0	1/1:0,8:8:24:208,24,0	1/1:0,16:16:44.99:391,45,0	1/1:1,5:6:11.99:104,12,0	1/1:0,11:11:29.99:260,30,0	0/0:16,0:15:30.06:0,30,318	0/0:9,0:9:27.01:0,27,274	0/0:2,0:2:5.98:0,6,53
chr10	82307114	.	CTT	C	1797.65	PASS	AB=0.737;AC=30;AF=0.536;AN=56;BaseQRankSum=-2.898;DP=514;FS=4.152;HRun=17;HaplotypeScore=63.9897;InbreedingCoeff=0.4001;MQ=53.94;MQ0=20;MQRankSum=3.550;QD=5.65;ReadPosRankSum=6.572;VQSLOD=-0.7317;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:36.90:0,37,330	0/1:4,2:7:0.01:27,0,0	0/1:46,0:6:0.74:1,0,33	0/0:49,0:8:2:0,2,18	0/1:15,12:27:11.93:163,0,12	1/1:12,5:19:17.15:167,17,0	0/0:12,0:13:23.73:0,24,223	0/0:26,0:35:50.19:0,50,466	1/1:12,8:22:25.85:200,26,0	1/1:14,2:16:13.98:91,14,0	1/1:8,14:24:21.70:251,22,0	1/1:6,2:8:2.81:24,3,0	1/1:8,1:10:11.51:78,12,0	0/1:6,7:14:12.41:55,0,12	1/1:8,4:12:8.15:58,8,0	1/1:6,3:10:11.70:95,12,0	0/1:14,8:22:6.23:139,0,6	1/1:6,15:22:24.21:265,24,0	0/0:7,0:11:16.57:0,17,149	0/0:12,0:13:19.94:0,20,139	0/1:1,5:8:17.07:96,0,17	0/1:7,0:7:14.81:24,0,15	1/1:6,7:16:2.63:63,3,0	1/1:3,3:6:8.74:71,9,0	0/1:12,8:20:17.83:121,0,18	0/0:21,0:22:40.80:0,41,369	0/0:8,0:22:16.77:0,17,143	0/0:3,0:4:9.01:0,9,85
chr10	82307532	.	C	CTGTG	3639.32	PASS	AB=0.799;AC=40;AF=0.800;AN=50;BaseQRankSum=0.732;DP=658;FS=1.089;HRun=0;HaplotypeScore=122.1995;InbreedingCoeff=-0.2405;MQ=73.47;MQ0=3;MQRankSum=1.003;QD=6.11;ReadPosRankSum=-0.173;VQSLOD=2.2913;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:41:23.43:23,0,38	1/1:7,3:11:9.03:209,9,0	./.	./.	1/1:8,9:17:5.51:67,6,0	0/1:18,0:18:11.19:138,0,11	0/1:21,0:30:43.75:44,0,109	0/1:25,0:25:15.06:77,0,15	0/1:13,1:29:32.28:149,0,32	1/1:22,1:23:14.97:166,15,0	1/1:12,0:13:8.73:99,9,0	0/1:10,8:22:40.65:65,0,41	1/1:10,8:22:3.59:270,4,0	1/1:13,15:31:14.79:283,15,0	1/1:14,11:30:29.39:571,29,0	1/1:19,1:23:19.80:211,20,0	1/1:24,12:36:3.01:71,3,0	0/1:16,1:24:36.17:131,0,36	1/1:19,0:19:8.92:99,9,0	1/1:8,0:13:2.74:12,3,0	1/1:30,0:40:4.78:19,5,0	1/1:7,5:15:2.54:70,3,0	0/1:13,0:13:0:0,0,0	0/1:19,18:37:19.57:537,0,20	1/1:6,6:13:3.01:66,3,0	0/1:14,0:23:2.65:100,0,3	1/1:18,7:26:11.71:164,12,0	./.
chr10	82308889	.	AAGGAGGAGG	A	919.43	PASS	AB=0.843;AC=7;AF=0.146;AN=48;BaseQRankSum=-0.726;DP=299;FS=13.043;HRun=0;HaplotypeScore=98.4833;InbreedingCoeff=-0.0488;MQ=76.07;MQ0=6;MQRankSum=-3.042;QD=7.73;ReadPosRankSum=1.195;VQSLOD=1.2613;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,2:25:32.12:192,0,32	0/0:4,0:4:2.94:0,3,18	./.	0/0:19,0:10:0:0,0,0	./.	0/0:11,0:12:6.02:0,6,103	0/1:20,12:32:18.12:291,0,18	1/1:15,0:15:3.01:39,3,0	0/0:8,0:8:6.02:0,6,81	0/0:10,0:10:5:0,5,189	0/0:2,0:1:2.97:0,3,20	0/0:5,0:5:3.01:0,3,71	0/0:10,0:9:7.38:0,7,85	./.	0/0:8,0:8:5.98:0,6,95	0/0:4,0:4:6.01:0,6,93	0/0:8,0:8:0:0,0,0	0/0:3,0:3:3.01:0,3,74	0/1:13,1:14:99:104,0,297	0/1:14,1:15:67.98:68,0,163	0/0:12,0:12:6.02:0,6,174	0/0:14,0:14:15.05:0,15,220	0/0:5,0:5:2.96:0,3,19	0/0:10,0:10:5.98:0,6,63	0/0:7,0:7:8.05:0,8,115	0/0:5,0:4:5.97:0,6,46	0/1:10,8:17:99:339,0,121	./.
chr10	82308917	.	A	AGAG	1449.29	PASS	AB=0.937;AC=12;AF=0.231;AN=52;BaseQRankSum=3.878;DP=323;FS=18.346;HRun=0;HaplotypeScore=128.6204;InbreedingCoeff=-0.3424;MQ=63.04;MQ0=15;MQRankSum=-3.352;QD=6.87;ReadPosRankSum=1.221;VQSLOD=1.8995;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,13:26:99:264,0,133	0/1:2,0:2:1.79:2,0,13	0/0:32,0:7:3.14:0,3,20	0/1:45,0:20:8.89:9,0,131	0/0:1,0:1:2.96:0,3,19	0/0:5,0:5:8.62:0,9,94	0/1:28,0:28:99:262,0,113	0/1:20,0:21:31.10:31,0,271	0/0:6,0:6:7:0,7,83	0/0:12,0:10:4.28:0,4,219	0/0:4,0:3:5.98:0,6,67	0/1:4,0:4:3.57:4,0,59	0/0:7,0:7:6.43:0,6,83	./.	0/0:5,0:5:9.46:0,9,105	0/1:6,0:6:27.07:27,0,36	0/0:3,0:3:3.48:0,3,39	0/0:3,0:3:8.94:0,9,109	0/1:16,3:18:99:346,0,117	0/1:15,7:21:99:327,0,109	0/0:5,0:5:9.03:0,9,134	0/0:12,0:12:26.31:0,26,303	0/0:7,0:7:13.15:0,13,135	0/1:4,0:4:25.68:26,0,54	0/1:11,0:11:17.67:18,0,241	0/0:10,0:9:20.05:0,20,160	0/1:20,1:20:99:267,0,216	./.
chr10	82308930	.	GGATC	G	119.99	PASS	AB=0.928;AC=12;AF=0.240;AN=50;BaseQRankSum=3.644;DP=273;FS=3.252;HRun=0;HaplotypeScore=115.9570;InbreedingCoeff=-0.1984;MQ=70.68;MQ0=11;MQRankSum=-1.974;QD=1.62;ReadPosRankSum=2.376;VQSLOD=1.9794;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:38.20:0,38,520	1/1:2,0:2:2.50:9,2,0	0/0:36,0:10:16.58:0,17,223	0/0:45,0:21:43.04:0,43,523	0/0:1,0:1:1.82:0,2,5	0/1:3,0:3:16.31:16,0,79	0/1:26,2:28:57.67:58,0,507	0/0:18,0:18:41.93:0,42,577	0/1:2,1:3:40.56:41,0,68	0/0:9,0:8:12.94:0,13,204	0/0:3,0:2:3.01:0,3,62	0/1:4,0:4:18.64:19,0,80	0/1:3,1:4:25.13:25,0,45	./.	0/1:3,1:4:45.86:46,0,56	0/0:6,0:6:8.71:0,9,111	0/0:1,0:1:3.01:0,3,63	0/1:3,0:3:4.14:4,0,60	0/0:15,0:15:38.96:0,39,664	0/0:19,0:18:6.23:0,6,379	0/0:2,0:2:3.01:0,3,64	0/1:6,0:6:8.80:9,0,138	0/0:5,0:5:7.51:0,8,127	./.	0/1:10,0:10:19.44:19,0,400	0/1:7,0:7:5.92:6,0,308	0/0:18,0:18:31.35:0,31,462	./.
chr10	82308932	.	A	AG	43.30	PASS	AB=0.888;AC=12;AF=0.240;AN=50;BaseQRankSum=5.248;DP=252;FS=6.493;HRun=3;HaplotypeScore=101.0590;InbreedingCoeff=-0.2120;MQ=72.92;MQ0=10;MQRankSum=-2.569;QD=0.42;ReadPosRankSum=1.126;VQSLOD=-0.5541;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,1:18:25.33:0,25,254	0/0:2,0:2:2.90:0,3,16	0/0:36,0:10:14.16:0,14,140	0/0:45,0:21:42.40:0,42,393	1/1:1,0:1:2.04:6,2,0	0/0:3,0:3:8.59:0,9,59	0/1:24,3:27:37.11:37,0,256	0/0:9,1:10:5.84:0,6,139	0/1:3,0:3:12.05:12,0,34	0/1:5,2:6:23.33:23,0,61	0/0:2,0:1:2.92:0,3,17	0/1:3,1:4:21.67:22,0,32	0/0:4,0:4:8.02:0,8,53	./.	0/1:4,0:4:14.14:21,0,14	0/0:5,0:5:11.85:0,12,80	0/0:1,0:1:2.99:0,3,23	0/0:2,0:2:4.80:0,5,27	0/0:14,0:14:35.69:0,36,256	0/1:15,4:18:21.77:22,0,149	0/0:2,0:2:2.97:0,3,20	0/1:5,1:6:15.36:15,0,59	0/0:4,0:4:11.71:0,12,68	./.	0/1:8,1:9:3.90:4,0,157	0/1:6,1:7:2.38:2,0,107	0/1:15,1:16:4.75:5,0,196	./.
chr10	82308944	.	A	AG	230.07	PASS	AB=0.803;AC=13;AF=0.260;AN=50;BaseQRankSum=5.684;DP=228;FS=1.739;HRun=3;HaplotypeScore=101.9619;InbreedingCoeff=-0.2747;MQ=76.37;MQ0=4;MQRankSum=-1.568;QD=1.98;ReadPosRankSum=0.645;VQSLOD=-0.4113;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,2:20:9.75:10,0,338	0/0:1,0:1:0.47:0,0,1	0/0:19,0:10:4.51:0,5,19	0/0:35,0:21:15.19:0,15,174	1/1:1,0:1:2.74:12,3,0	0/0:3,1:4:5.51:0,6,74	0/1:19,4:23:19.51:20,0,317	0/0:9,0:9:20.52:0,21,221	0/1:1,2:3:27.51:32,0,28	0/1:5,2:6:59.44:78,0,59	0/0:2,0:1:3.01:0,3,39	0/1:3,1:4:29.14:34,0,29	0/0:3,1:4:6.46:0,6,62	./.	0/1:1,3:4:8.05:47,0,8	0/0:3,0:3:8.93:0,9,78	0/0:1,0:1:2.97:0,3,20	0/0:2,0:2:2.95:0,3,39	0/0:16,0:16:41.56:0,42,397	0/1:16,3:18:11.31:11,0,154	0/0:2,0:2:3.01:0,3,38	0/1:5,1:6:17.37:17,0,66	0/1:4,1:5:38.44:38,0,67	./.	0/0:9,0:9:1.52:0,2,207	0/1:6,1:7:40.49:40,0,174	0/1:15,2:17:22.54:23,0,210	./.
chr10	82308945	.	G	GTACAA	377.87	PASS	AB=0.923;AC=3;AF=0.060;AN=50;BaseQRankSum=0.510;DP=224;FS=18.667;HRun=0;HaplotypeScore=117.2665;InbreedingCoeff=0.2658;MQ=73.20;MQ0=4;MQRankSum=2.921;QD=6.87;ReadPosRankSum=-1.097;VQSLOD=1.1815;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:48.48:0,48,798	0/0:1,0:1:1.82:0,2,5	1/1:15,2:9:12.02:258,12,0	0/1:33,2:20:99:216,0,196	0/0:1,0:1:2.84:0,3,14	0/0:4,0:4:7.58:0,8,113	0/0:23,0:23:62.19:0,62,951	0/0:9,0:9:21.04:0,21,401	0/0:3,0:3:8.51:0,9,82	0/0:7,0:6:8.14:0,8,252	0/0:2,0:1:3.01:0,3,70	0/0:4,0:4:6.91:0,7,112	0/0:4,0:4:8.99:0,9,115	./.	0/0:4,0:4:7.28:0,7,34	0/0:3,0:3:8.96:0,9,145	0/0:1,0:1:2.97:0,3,20	0/0:2,0:2:6.02:0,6,110	0/0:14,0:14:42.10:0,42,848	0/0:19,0:18:39.24:0,39,537	0/0:2,0:2:3.01:0,3,67	0/0:6,0:6:12.38:0,12,168	0/0:5,0:5:11.75:0,12,164	./.	0/0:9,0:9:21.46:0,21,330	0/0:7,0:7:15.52:0,16,351	0/0:17,0:17:43.60:0,44,548	./.
chr10	82309346	.	AGGAGGAGGAGCG	A	2672.31	PASS	AB=0.922;AC=23;AF=0.411;AN=56;BaseQRankSum=0.836;DP=352;FS=20.255;HRun=0;HaplotypeScore=193.5933;InbreedingCoeff=-0.5227;MQ=38.69;MQ0=10;MQRankSum=-2.689;QD=9.86;ReadPosRankSum=-1.742;VQSLOD=0.8917;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:33.16:0,33,1517	1/1:2,0:2:3.01:76,3,0	0/0:15,0:1:3.01:0,3,34	0/0:22,0:8:1.80:0,2,134	0/1:11,1:12:36.01:36,0,186	0/1:10,3:12:99:380,0,361	0/1:23,0:22:81.82:82,0,1369	0/1:15,0:8:26.95:27,0,259	0/1:7,1:9:74.09:74,0,325	0/1:18,0:16:73.30:73,0,574	0/0:3,0:4:2.96:0,3,65	0/1:13,3:17:99:334,0,340	0/1:12,0:12:73.75:74,0,413	0/1:5,1:7:79.58:123,0,80	0/1:9,3:12:99:295,0,232	0/1:11,1:12:99:301,0,286	0/1:3,1:4:42.42:176,0,42	1/1:1,1:2:5.61:83,6,0	0/1:12,0:9:4.93:5,0,507	0/1:17,0:17:78.47:78,0,513	0/1:11,1:11:90.52:173,0,91	0/1:10,2:10:55.75:123,0,56	0/0:6,0:6:9.03:0,9,167	0/0:2,0:2:3.01:0,3,47	0/1:5,1:6:89.99:120,0,90	0/1:35,0:34:54.26:54,0,2016	0/1:18,0:19:99:138,0,356	0/0:9,0:9:24.08:0,24,820
chr10	82309376	.	AGGAAG	A	3018.51	PASS	AB=0.745;AC=24;AF=0.429;AN=56;BaseQRankSum=9.829;DP=458;FS=64.250;HRun=0;HaplotypeScore=220.6333;InbreedingCoeff=-0.2267;MQ=50.47;MQ0=11;MQRankSum=-5.054;QD=11.06;ReadPosRankSum=5.370;VQSLOD=0.5323;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:41.73:0,42,1662	1/1:0,2:2:5.93:67,6,0	0/0:25,0:10:3.76:0,4,255	0/0:49,0:13:0.48:0,0,111	0/1:11,3:14:0.81:65,0,1	0/1:10,6:15:99:198,0,281	0/0:35,0:34:42.13:0,42,1954	0/0:13,0:7:17.96:0,18,366	0/1:6,5:11:99:179,0,204	0/1:14,5:18:99:232,0,541	1/1:5,2:7:4.41:24,4,0	0/1:7,15:22:68.85:471,0,69	0/1:7,8:15:77.20:161,0,77	0/1:7,4:11:99:191,0,230	0/1:7,9:16:99:332,0,147	0/1:9,7:16:99:235,0,204	1/1:1,5:6:15.05:229,15,0	1/1:1,3:4:9.03:154,9,0	0/0:10,0:6:18.01:0,18,417	0/0:17,0:15:0.47:0,0,401	0/1:10,6:14:61.20:152,0,61	0/1:10,5:14:99:126,0,245	0/1:8,1:8:5.61:6,0,102	0/1:4,2:6:4.15:4,0,16	0/1:7,6:12:99:244,0,166	0/1:33,4:36:70.92:71,0,1772	0/1:15,3:18:40.42:40,0,508	0/0:9,0:9:24.08:0,24,573
chr10	82309379	.	AAG	A	390.46	PASS	AB=0.972;AC=20;AF=0.357;AN=56;BaseQRankSum=6.635;DP=449;FS=31.577;HRun=0;HaplotypeScore=215.4855;InbreedingCoeff=-0.1830;MQ=52.38;MQ0=9;MQRankSum=-7.380;QD=1.48;ReadPosRankSum=0.358;VQSLOD=1.2817;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:63.15:0,63,777	0/1:3,0:3:11.20:21,0,11	0/0:26,0:11:29.20:0,29,298	0/1:52,1:14:26.77:27,0,141	0/0:12,1:14:5.61:0,6,50	0/0:15,0:15:0.85:0,1,194	0/0:33,0:34:76.51:0,77,983	0/0:12,0:7:15.04:0,15,182	0/1:12,0:12:27.11:27,0,166	0/1:18,1:18:34.77:35,0,323	1/1:7,0:7:2.03:5,2,0	0/1:20,1:21:87.02:92,0,87	0/1:11,1:12:5.50:5,0,211	0/1:10,0:10:24.45:24,0,116	0/1:15,1:16:81.80:82,0,95	0/1:16,0:16:44.93:45,0,125	1/1:7,0:6:9.60:50,10,0	1/1:4,0:4:8.51:45,9,0	0/0:6,0:4:12.04:0,12,143	0/0:16,0:14:9.61:0,10,225	0/1:14,0:12:18.75:19,0,51	0/1:14,0:14:16.78:17,0,190	0/0:7,0:6:2.21:0,2,45	0/1:5,1:6:6:6,0,14	0/1:13,0:12:24.37:24,0,121	0/1:35,0:35:27.17:27,0,696	0/0:18,0:18:33.72:0,34,326	0/0:9,0:9:24.04:0,24,272
chr10	82309386	.	GGAGC	G	3511.68	PASS	AB=0.739;AC=25;AF=0.446;AN=56;BaseQRankSum=9.326;DP=465;FS=75.319;HRun=0;HaplotypeScore=229.0390;InbreedingCoeff=-0.3977;MQ=57.33;MQ0=9;MQRankSum=-6.592;QD=10.15;ReadPosRankSum=4.536;VQSLOD=0.4702;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:68.34:0,68,1675	0/1:1,2:3:18.27:71,0,18	0/0:31,0:13:6.25:0,6,368	0/1:49,0:15:16.34:16,0,147	0/1:11,4:15:51.12:146,0,51	0/1:10,6:16:99:166,0,222	0/0:36,0:35:85.49:0,85,2318	0/0:11,0:7:18.05:0,18,421	0/1:10,5:15:99:221,0,284	0/1:14,6:19:99:277,0,525	1/1:4,2:6:2.75:7,3,0	0/1:4,17:21:54.38:473,0,54	0/1:3,9:12:99:135,0,131	0/1:5,5:10:99:156,0,220	0/1:7,11:18:99:330,0,158	0/1:9,9:18:99:346,0,132	1/1:2,5:6:15.02:203,15,0	1/1:1,3:4:9.03:135,9,0	0/0:7,0:5:15.04:0,15,376	0/1:14,1:13:1.40:1,0,408	0/1:10,6:14:32.24:183,0,32	0/1:12,5:17:99:146,0,276	0/1:5,1:5:15.22:15,0,93	0/1:3,4:7:19.52:24,0,20	0/1:10,6:15:99:250,0,157	0/1:29,7:36:99:180,0,1767	0/1:14,3:17:29.63:30,0,548	0/0:7,0:7:20.96:0,21,535
chr10	82309405	.	G	GAGC	366.56	PASS	AB=0.926;AC=12;AF=0.214;AN=56;BaseQRankSum=7.925;DP=476;FS=34.101;HRun=0;HaplotypeScore=239.4223;InbreedingCoeff=-0.2139;MQ=59.82;MQ0=13;MQRankSum=-6.608;QD=2.08;ReadPosRankSum=0.814;VQSLOD=1.3410;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:69.15:0,69,1077	0/1:2,1:3:59.52:60,0,93	0/0:38,0:14:32.32:0,32,304	0/0:48,0:17:10.88:0,11,152	0/0:8,2:10:16.22:0,16,200	0/1:14,0:13:10.92:11,0,199	0/0:29,0:28:75.19:0,75,1218	0/0:13,0:10:27.09:0,27,460	0/1:13,0:13:0.67:1,0,265	0/1:20,1:20:44.27:44,0,507	0/1:5,1:5:0:0,0,0	0/1:21,0:21:84.11:84,0,310	0/0:16,0:15:4.13:0,4,188	0/0:14,0:13:18.66:0,19,336	0/1:17,0:17:17.33:17,0,172	0/0:18,0:18:25.68:0,26,522	0/0:6,0:6:10.42:0,10,197	0/0:4,0:4:9.03:0,9,142	0/0:8,0:7:18.05:0,18,282	0/0:11,1:10:22.07:0,22,339	0/1:19,0:17:61.86:62,0,377	0/1:22,4:26:27.77:28,0,385	0/1:5,1:5:17.58:18,0,45	0/1:10,1:10:74.17:74,0,121	0/1:17,2:18:99:107,0,292	0/0:33,0:33:26.89:0,27,1057	0/0:13,0:13:3.42:0,3,398	0/0:7,0:7:21.05:0,21,331
chr10	82309408	.	G	GAAGA	1151.47	PASS	AB=0.990;AC=17;AF=0.304;AN=56;BaseQRankSum=9.772;DP=470;FS=53.793;HRun=0;HaplotypeScore=247.0186;InbreedingCoeff=-0.3282;MQ=59.16;MQ0=14;MQRankSum=-7.058;QD=4.41;ReadPosRankSum=-3.134;VQSLOD=0.7164;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:71.02:0,71,1262	0/0:3,0:3:4:0,4,116	0/0:38,0:14:26.04:0,26,325	0/0:51,0:18:11.64:0,12,237	0/1:10,0:10:6.63:7,0,189	0/1:14,0:13:64.26:64,0,244	0/0:30,0:29:75.23:0,75,1423	0/0:14,0:12:33.10:0,33,594	0/1:13,0:13:72.55:73,0,246	0/1:20,0:19:47.76:48,0,567	1/1:5,0:4:1.46:4,1,0	0/1:20,1:21:99:306,0,368	0/1:14,0:13:99:166,0,167	0/1:14,0:13:4.93:5,0,373	0/1:15,1:16:99:154,0,249	0/1:17,1:18:99:140,0,565	0/1:7,0:6:6.31:6,0,224	0/0:4,0:4:9.03:0,9,179	0/0:8,0:7:18.05:0,18,326	0/0:11,0:10:22.59:0,23,411	0/1:20,0:18:81.62:82,0,440	0/1:26,0:26:44.66:45,0,389	0/0:6,0:5:5.49:0,5,81	0/0:8,1:9:11.47:0,11,159	0/1:19,0:19:6.78:7,0,330	0/1:31,0:31:99:131,0,1187	0/1:13,0:13:65.85:66,0,442	0/0:7,0:7:21.05:0,21,383
chr10	82309409	.	AGAGGG	A	1252.03	PASS	AB=0.809;AC=20;AF=0.357;AN=56;BaseQRankSum=8.447;DP=451;FS=67.034;HRun=0;HaplotypeScore=224.5629;InbreedingCoeff=-0.4285;MQ=57.70;MQ0=14;MQRankSum=-6.989;QD=4.71;ReadPosRankSum=-1.967;VQSLOD=-0.3366;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:72.22:0,72,2025	0/1:3,0:3:16.88:17,0,104	0/0:37,0:13:28.88:0,29,452	0/0:50,0:16:22.14:0,22,313	0/0:8,0:10:16.49:0,16,324	0/1:7,2:11:99:104,0,231	0/0:29,0:29:78.25:0,78,2350	0/0:13,1:12:33.11:0,33,925	0/1:6,3:12:76.54:77,0,237	0/1:13,3:17:56.05:56,0,734	1/1:4,0:3:1.55:4,2,0	0/1:10,8:20:99:335,0,301	0/1:6,2:9:71.93:72,0,208	0/1:8,2:12:14.65:15,0,327	0/1:7,4:15:99:180,0,244	0/1:13,3:18:99:126,0,683	0/1:6,1:6:24.28:24,0,147	0/0:4,0:4:9.03:0,9,140	0/0:8,0:7:18.05:0,18,508	0/1:9,0:10:38.11:38,0,626	0/1:18,1:17:99:105,0,606	0/1:13,4:25:83.90:84,0,466	0/1:6,0:6:4.76:5,0,106	0/1:9,0:9:34.34:34,0,159	0/1:11,2:17:76.54:77,0,267	0/1:27,4:31:54.57:55,0,1981	0/1:11,2:13:2.44:2,0,749	0/0:6,0:6:18.06:0,18,590
chr10	82309414	.	G	GAGA	417.24	PASS	AB=0.876;AC=10;AF=0.179;AN=56;BaseQRankSum=6.991;DP=458;FS=37.194;HRun=0;HaplotypeScore=215.3896;InbreedingCoeff=-0.1726;MQ=56.39;MQ0=14;MQRankSum=-5.968;QD=2.62;ReadPosRankSum=-2.025;VQSLOD=1.2849;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:66.19:0,66,1058	0/1:2,1:3:59.66:60,0,93	0/0:43,0:13:26.12:0,26,332	0/1:46,0:14:15.18:15,0,164	0/0:8,2:10:5.85:0,6,163	0/0:15,0:14:24.63:0,25,261	0/0:31,0:31:87.14:0,87,1349	0/0:16,0:14:39.12:0,39,610	0/0:11,0:11:21.34:0,21,255	0/1:17,0:16:34.63:35,0,447	0/1:3,1:3:0:0,0,0	0/1:20,0:20:41.98:42,0,309	0/0:10,0:9:13.41:0,13,203	0/0:13,0:12:10.80:0,11,344	0/0:15,0:15:14.88:0,15,205	0/0:18,0:18:6.13:0,6,494	0/0:7,0:6:0.96:0,1,178	0/0:5,0:5:11.18:0,11,117	0/0:9,0:8:18.05:0,18,275	0/1:11,1:12:38.21:38,0,351	0/0:19,0:17:17.06:0,17,309	0/1:22,3:24:97.46:97,0,293	0/1:4,1:5:30.67:31,0,59	0/1:7,2:8:91.18:114,0,91	0/1:13,3:16:99:122,0,269	0/0:32,0:32:20.46:0,20,1081	0/0:12,0:12:27.04:0,27,428	0/0:6,0:6:18.06:0,18,296
chr10	82309451	.	AGC	A	94.93	PASS	AB=0.952;AC=10;AF=0.179;AN=56;BaseQRankSum=3.956;DP=429;FS=5.612;HRun=0;HaplotypeScore=130.2898;InbreedingCoeff=-0.2695;MQ=44.54;MQ0=25;MQRankSum=-5.590;QD=0.88;ReadPosRankSum=-5.879;VQSLOD=0.0667;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.28:0,81,1610	0/1:4,2:5:8.66:9,0,124	0/0:35,0:10:2.78:0,3,248	0/0:42,0:9:8.15:0,8,205	0/1:9,2:11:33.88:34,0,44	0/1:20,0:19:47.85:48,0,377	0/0:30,0:29:66:0,66,1559	0/0:19,0:15:42.13:0,42,778	0/1:9,0:9:25.37:25,0,240	0/0:11,0:10:7.55:0,8,276	0/0:4,0:4:2.91:0,3,19	0/0:11,0:11:14.18:0,14,329	0/1:10,0:10:24.55:25,0,118	0/1:12,0:12:28.83:29,0,281	0/0:9,0:9:2.35:0,2,184	0/0:17,0:17:25.28:0,25,556	0/1:6,0:6:29.42:29,0,153	0/0:6,0:6:3.17:0,3,120	0/0:13,0:7:18.06:0,18,365	0/0:13,0:12:26.16:0,26,596	0/1:14,0:13:6.14:6,0,223	0/0:16,1:17:2.62:0,3,419	0/0:10,0:9:1.84:0,2,179	0/1:8,0:7:17.56:18,0,160	0/1:11,1:12:6.10:6,0,437	0/0:32,0:32:90.27:0,90,1770	0/0:14,0:14:36.11:0,36,647	0/0:8,0:7:18.02:0,18,324
chr10	82309477	.	GAGGAAGAGC	G	173.04	PASS	AB=0.938;AC=7;AF=0.125;AN=56;BaseQRankSum=7.191;DP=491;FS=64.465;HRun=0;HaplotypeScore=144.8064;InbreedingCoeff=-0.0917;MQ=46.45;MQ0=36;MQRankSum=-4.626;QD=1.71;ReadPosRankSum=-2.912;VQSLOD=-0.6926;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,99,3566	0/1:3,0:3:5.82:13,0,6	0/1:44,0:10:2.10:2,0,328	0/0:51,0:15:16.47:0,16,650	0/1:3,2:5:35.10:35,0,179	0/0:21,0:20:39.41:0,39,2168	0/0:33,0:32:84.22:0,84,3037	0/0:26,0:18:48.59:0,49,1572	0/0:13,0:13:36.12:0,36,1519	0/0:15,0:13:11.44:0,11,1225	0/0:8,0:8:24.04:0,24,886	0/0:8,0:8:2.07:0,2,840	0/0:13,0:13:23.23:0,23,1507	0/0:15,0:15:36.96:0,37,1431	0/1:14,0:14:15.86:16,0,1134	0/0:15,0:15:12.05:0,12,1195	0/0:7,0:6:18.01:0,18,614	0/0:3,0:4:8.63:0,9,433	0/0:18,0:9:24.04:0,24,786	0/0:14,0:13:36.09:0,36,1288	0/0:26,0:26:54.17:0,54,1856	0/1:13,1:14:99:104,0,352	0/1:10,0:9:63.66:64,0,499	0/0:12,0:11:24.06:0,24,784	0/1:10,1:11:62.19:62,0,1026	0/0:34,0:34:93.31:0,93,3423	0/0:13,0:13:39.13:0,39,1487	0/0:6,0:6:18.06:0,18,679
chr10	82309998	.	CT	C	5487.24	PASS	AB=0.683;AC=44;AF=0.786;AN=56;BaseQRankSum=1.482;DP=553;FS=1.396;HRun=14;HaplotypeScore=64.3633;InbreedingCoeff=-0.2585;MQ=77.81;MQ0=2;MQRankSum=-0.485;QD=9.92;ReadPosRankSum=4.396;VQSLOD=4.4073;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:5,16:21:14.01:205,0,14	0/1:3,7:10:28.89:117,0,29	0/1:30,2:23:40.56:41,0,92	0/1:16,0:14:11.90:12,0,59	0/1:7,16:23:4.54:257,0,5	1/1:4,16:20:41.61:288,42,0	1/1:4,9:15:30.80:197,31,0	0/1:15,19:33:21.12:307,0,21	1/1:2,11:14:25.73:165,26,0	1/1:10,20:31:29.92:328,30,0	1/1:6,18:25:51.39:340,51,0	0/1:11,5:16:23.36:126,0,23	1/1:5,15:20:41.09:270,41,0	1/1:6,12:18:19.76:248,20,0	1/1:10,14:26:24.85:206,25,0	0/1:6,6:12:59.71:79,0,60	1/1:2,12:15:28.80:191,29,0	0/1:6,12:21:14.31:176,0,14	0/1:10,6:16:10.11:85,0,10	1/1:10,18:29:30.28:338,30,0	1/1:9,8:17:23.73:164,24,0	1/1:3,14:19:39.70:259,40,0	0/1:8,19:27:18.55:272,0,19	1/1:1,7:8:17.85:123,18,0	0/1:8,15:25:28.33:192,0,28	1/1:7,13:21:37.61:252,38,0	1/1:3,15:19:34.74:232,35,0	1/1:1,1:2:2.94:21,3,0
chr10	82310848	.	A	ATGTGTGTG	2468.85	PASS	AB=1.000;AC=37;AF=0.771;AN=48;BaseQRankSum=-2.324;DP=531;FS=5.595;HRun=0;HaplotypeScore=144.8265;InbreedingCoeff=0.4048;MQ=54.09;MQ0=54;MQRankSum=0.163;QD=6.53;ReadPosRankSum=-0.264;VQSLOD=2.1357;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:19:0.03:0,0,0	1/1:13,0:12:8.15:307,8,0	./.	./.	1/1:22,0:22:2.36:64,2,0	1/1:16,0:15:6.49:165,6,0	0/0:16,0:15:2.57:0,3,15	./.	1/1:17,0:14:3.01:104,3,0	1/1:18,0:15:9.03:280,9,0	1/1:28,0:25:3:25,3,0	0/0:15,0:14:0.88:0,1,2	1/1:15,0:15:3.48:121,3,0	1/1:22,0:21:2.70:23,3,0	1/1:18,0:17:2.50:75,3,0	1/1:13,0:13:9.03:248,9,0	1/1:22,0:20:9.50:292,10,0	1/1:12,0:10:9.03:264,9,0	1/1:22,0:16:1.25:3,1,0	0/0:12,0:11:9.03:0,9,186	1/1:21,0:19:3.01:64,3,0	1/1:21,0:20:9.01:157,9,0	1/1:21,0:18:5.67:125,6,0	1/1:22,0:20:2.44:41,2,0	1/1:25,3:25:5.63:236,6,0	0/0:22,0:23:2.07:0,2,54	0/0:15,0:18:15.05:0,15,284	./.
chr10	82311712	.	C	CAAT	1949.88	PASS	AB=0.955;AC=16;AF=0.296;AN=54;BaseQRankSum=6.724;DP=332;FS=4.223;HRun=0;HaplotypeScore=67.9722;InbreedingCoeff=-0.3337;MQ=56.55;MQ0=0;MQRankSum=-4.140;QD=11.89;ReadPosRankSum=4.211;VQSLOD=3.0029;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:74.81:0,75,1009	0/1:6,0:6:60.08:95,0,60	0/0:14,0:12:16.30:0,16,216	0/0:7,0:4:3.01:0,3,31	0/1:19,0:19:99:359,0,121	0/1:19,0:19:92.02:318,0,92	0/0:3,0:3:2.90:0,3,45	0/0:26,0:26:63.06:0,63,859	0/1:9,1:10:55.71:183,0,56	0/1:12,0:12:96.46:96,0,165	0/1:14,0:14:88.04:166,0,88	0/0:2,0:2:6:0,6,58	0/1:7,1:8:50.86:51,0,146	0/1:5,1:6:44.17:44,0,94	1/1:0,3:3:3.01:53,3,0	0/1:7,0:7:6.94:7,0,156	0/1:16,1:17:78.50:78,0,180	0/1:15,2:17:99:370,0,128	0/0:15,0:15:27.09:0,27,382	0/0:18,0:18:48.15:0,48,686	./.	0/1:6,0:7:53.21:53,0,89	0/1:5,0:5:25.81:26,0,68	0/0:1,0:1:3.01:0,3,42	0/1:14,0:14:99:201,0,217	0/0:22,0:22:21.86:0,22,819	0/0:22,0:22:57.18:0,57,834	0/0:8,0:8:24.08:0,24,355
chr10	82314076	.	C	CCT	16959.66	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-16.908;DP=720;FS=2.586;HRun=0;HaplotypeScore=83.0367;InbreedingCoeff=0.9666;MQ=65.96;MQ0=0;MQRankSum=-1.664;QD=38.28;ReadPosRankSum=6.966;VQSLOD=6.9596;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,144,1786	1/1:0,10:11:18.06:301,18,0	0/0:30,0:25:62.16:0,62,774	0/0:31,0:22:52.67:0,53,624	1/1:2,18:20:48.16:775,48,0	1/1:7,20:28:48.16:803,48,0	0/0:23,0:24:59.41:0,59,738	0/0:33,0:33:78.19:0,78,948	1/1:4,18:22:9.96:715,10,0	1/1:4,22:26:69.24:1141,69,0	1/1:4,21:25:57.19:953,57,0	1/1:2,22:25:63.22:1053,63,0	1/1:3,20:23:60.20:1003,60,0	1/1:0,20:23:51.17:854,51,0	1/1:5,25:30:28.03:1016,28,0	1/1:5,16:21:45.15:749,45,0	1/1:3,27:31:37.06:1149,37,0	1/1:3,16:19:42.14:702,42,0	0/0:22,0:22:60.19:0,60,764	0/0:35,0:35:93.29:0,93,1170	1/1:1,32:34:90.31:1506,90,0	1/1:5,26:31:37.06:1167,37,0	1/1:4,27:33:77.95:1305,78,0	1/1:2,13:15:38.72:613,39,0	1/1:3,23:26:69.24:1155,69,0	0/0:21,1:22:3.94:0,4,599	0/0:23,0:23:63.19:0,63,788	0/0:6,0:6:15:0,15,147
chr10	82315624	.	A	AATATAT	574.33	PASS	AC=10;AF=0.263;AN=38;BaseQRankSum=-1.808;DP=153;FS=0.000;HRun=0;HaplotypeScore=37.8476;InbreedingCoeff=0.5022;MQ=61.65;MQ0=3;MQRankSum=-1.702;QD=18.53;ReadPosRankSum=-2.379;VQSLOD=1.8533;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:2,0:5:2.66:0,3,5	0/0:1,0:1:0.89:0,1,2	0/0:12,0:3:2.94:0,3,18	0/0:2,0:5:2.66:0,3,5	1/1:3,0:6:6.02:77,6,0	./.	1/1:16,0:16:27.05:443,27,0	./.	0/0:4,0:5:0.89:0,1,2	0/0:3,0:3:1.25:0,1,3	1/1:1,0:2:3.01:39,3,0	./.	0/0:0,0:1:0.89:0,1,2	0/0:0,0:3:2.66:0,3,5	./.	0/0:7,0:16:12.22:0,12,138	0/0:5,0:18:13.69:0,14,84	./.	1/1:3,0:3:3.01:50,3,0	./.	0/0:0,0:1:0.89:0,1,2	./.	./.	0/0:4,0:10:1.77:0,2,3	0/0:0,0:3:8.70:0,9,94	1/1:2,1:4:3.01:79,3,0	0/0:4,0:13:12.04:0,12,167
chr10	82317216	.	GA	G	373.16	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.031;DP=543;FS=1.867;HRun=8;HaplotypeScore=77.3049;InbreedingCoeff=0.9403;MQ=81.87;MQ0=1;MQRankSum=-0.019;QD=18.66;ReadPosRankSum=-0.648;VQSLOD=3.3924;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.11:0,72,826	0/0:8,0:8:23.97:0,24,268	0/0:31,0:23:37.24:0,37,434	0/0:30,0:28:49.73:0,50,570	0/0:30,0:30:72.18:0,72,833	0/0:24,0:24:37.28:0,37,698	0/0:15,0:15:39.09:0,39,446	0/0:27,0:27:72.17:0,72,811	0/0:16,0:16:45.09:0,45,498	0/0:32,0:33:90.08:0,90,1027	0/0:20,0:20:60.16:0,60,698	0/0:20,0:20:57.17:0,57,686	0/0:17,0:17:48.15:0,48,578	0/0:13,0:13:36.10:0,36,422	0/0:21,0:21:60.16:0,60,700	0/0:18,0:18:51.13:0,51,593	0/0:34,0:34:99:0,99,1169	0/0:9,0:9:27.05:0,27,310	0/0:15,0:15:42.09:0,42,467	0/0:25,0:25:66.18:0,66,773	0/0:9,0:9:24.07:0,24,289	0/0:19,0:19:57.10:0,57,643	0/0:11,0:11:33.09:0,33,384	0/0:14,0:14:42.12:0,42,493	0/0:13,0:13:36.10:0,36,421	1/1:1,15:16:45.05:428,45,0	0/0:24,0:24:63.13:0,63,719	1/1:0,4:4:6.01:57,6,0
chr10	82317773	.	A	ATC	13921.19	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-15.736;DP=638;FS=3.306;HRun=0;HaplotypeScore=71.3427;InbreedingCoeff=0.9967;MQ=86.82;MQ0=1;MQRankSum=-4.693;QD=38.56;ReadPosRankSum=4.943;VQSLOD=7.0643;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,114,1381	1/1:3,9:12:24.08:396,24,0	0/0:36,0:35:62.99:0,63,788	0/0:27,0:28:51.22:0,51,589	1/1:2,21:23:63.22:1040,63,0	1/1:4,18:22:39.13:644,39,0	0/0:19,0:19:51.16:0,51,638	0/0:33,0:33:54.15:0,54,654	1/1:5,16:21:14.29:756,14,0	1/1:6,27:33:78.27:1287,78,0	1/1:2,16:17:39.13:644,39,0	1/1:2,14:16:39.13:644,39,0	1/1:3,15:18:45.15:738,45,0	1/1:3,14:17:42.14:689,42,0	1/1:2,11:13:30.10:495,30,0	1/1:2,16:18:48.16:793,48,0	1/1:1,18:19:45.15:743,45,0	1/1:3,21:24:57.19:941,57,0	0/0:15,0:15:33.08:0,33,388	0/0:32,0:32:81.26:0,81,1013	1/1:3,15:18:39.13:644,39,0	1/1:7,17:24:48.16:793,48,0	1/1:2,27:29:71.89:1189,72,0	1/1:1,12:13:33.11:545,33,0	1/1:3,20:23:57.19:941,57,0	0/0:28,0:28:72.21:0,72,887	0/0:29,0:29:63.20:0,63,788	0/0:14,0:14:42.13:0,42,525
chr10	82318498	.	GAT	G	2717.30	PASS	AB=0.779;AC=14;AF=0.250;AN=56;BaseQRankSum=-1.346;DP=569;FS=15.021;HRun=0;HaplotypeScore=76.5843;InbreedingCoeff=0.8316;MQ=72.91;MQ0=11;MQRankSum=-0.246;QD=15.89;ReadPosRankSum=-0.835;VQSLOD=1.8509;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:27:68.79:551,69,0	0/0:10,0:10:29.91:0,30,242	0/0:28,0:18:40.35:0,40,462	0/0:44,0:27:22.11:0,22,406	0/0:26,0:26:59.87:0,60,484	0/0:16,0:15:36.31:0,36,284	1/1:31,0:31:74.25:605,74,0	1/1:17,7:24:68.95:605,69,0	0/0:18,0:18:47.95:0,48,443	0/0:20,0:19:53.38:0,53,453	0/0:10,0:10:29.96:0,30,248	0/0:14,0:14:35.96:0,36,299	0/0:22,0:22:42.71:0,43,363	0/0:17,0:17:46.78:0,47,423	0/0:14,0:13:32.97:0,33,297	0/0:18,0:16:47.88:0,48,391	0/0:18,0:18:44.77:0,45,345	0/0:18,0:18:44.79:0,45,378	1/1:21,0:20:49.64:462,50,0	0/1:6,23:29:8.04:8,0,18	0/0:22,0:21:56.83:0,57,453	0/0:21,0:21:45.70:0,46,358	0/0:26,0:26:59.78:0,60,476	0/0:16,0:16:32.92:0,33,296	0/0:20,0:19:43.25:0,43,379	0/1:7,0:7:8.97:121,0,9	1/1:21,0:20:41.38:427,41,0	1/1:10,0:7:17.84:130,18,0
chr10	82319044	.	AGTT	A	13881.73	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=20.116;DP=671;FS=0.000;HRun=0;HaplotypeScore=231.9572;InbreedingCoeff=0.9984;MQ=88.35;MQ0=0;MQRankSum=-19.810;QD=36.72;ReadPosRankSum=6.742;VQSLOD=5.1607;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,157,3616	1/1:5,8:13:30.05:459,30,0	0/0:40,0:40:99:0,120,2661	0/0:25,0:25:63.04:0,63,1258	1/1:9,29:38:63.20:995,63,0	1/1:3,15:18:45.09:694,45,0	0/0:35,0:35:99:0,105,2436	0/0:26,0:26:75.26:0,75,1612	1/1:5,21:26:68.55:1063,69,0	1/1:6,13:19:48.11:744,48,0	1/1:4,20:24:57.19:916,57,0	1/1:9,23:32:80.86:1194,81,0	1/1:4,27:31:86.77:1387,87,0	1/1:3,21:24:64.20:1015,64,0	1/1:4,22:26:69.18:1073,69,0	1/1:5,13:18:41.59:629,42,0	1/1:3,8:11:20.28:308,20,0	1/1:4,10:14:36.11:570,36,0	0/0:25,0:25:75.26:0,75,1677	0/0:25,0:25:75.26:0,75,1708	1/1:3,10:13:23.31:399,23,0	1/1:6,21:27:68.96:1068,69,0	1/1:8,10:18:36.05:503,36,0	1/1:6,10:16:26.86:414,27,0	1/1:1,9:10:27.09:451,27,0	0/0:30,1:31:43.64:0,44,2065	0/0:22,0:22:66.23:0,66,1552	0/0:11,0:11:33.11:0,33,780
chr10	82319045	.	G	GAC	9742.76	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=19.595;DP=623;FS=0.000;HRun=0;HaplotypeScore=224.7799;InbreedingCoeff=0.9986;MQ=90.83;MQ0=0;MQRankSum=-19.786;QD=29.70;ReadPosRankSum=6.550;VQSLOD=5.4877;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,156,2413	1/1:10,0:10:30.09:368,30,0	0/0:39,0:40:99:0,119,1795	0/0:24,0:24:62.67:0,63,905	1/1:31,0:31:63.15:693,63,0	1/1:15,0:15:42.96:436,43,0	0/0:35,0:35:99:0,105,1637	0/0:27,0:27:75.22:0,75,1151	1/1:22,1:23:67.99:757,68,0	1/1:16,0:16:48.10:591,48,0	1/1:21,1:22:57.13:598,57,0	1/1:26,1:27:80.25:934,80,0	1/1:28,1:29:87.21:937,87,0	1/1:22,1:23:63.63:687,64,0	1/1:22,0:23:67.82:703,68,0	1/1:13,1:14:40.92:436,41,0	1/1:8,1:9:21.06:237,21,0	1/1:10,1:12:36.11:448,36,0	0/0:26,0:26:78.21:0,78,1177	0/0:25,0:25:72.24:0,72,1157	1/1:10,2:12:23.88:268,24,0	1/1:21,1:23:66.51:697,67,0	1/1:11,1:14:36.06:391,36,0	1/1:13,3:16:26.91:266,27,0	1/1:9,0:9:27.07:295,27,0	0/0:31,0:31:58.65:0,59,1409	0/0:22,0:22:66.23:0,66,1076	0/0:11,0:11:33.11:0,33,538
chr10	82319046	.	T	TCTC	8065.65	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=20.237;DP=622;FS=1.688;HRun=0;HaplotypeScore=242.1521;InbreedingCoeff=0.9984;MQ=91.96;MQ0=0;MQRankSum=-19.950;QD=24.97;ReadPosRankSum=6.847;VQSLOD=4.7255;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,159,2897	1/1:10,0:10:30.02:320,30,0	0/0:41,0:41:99:0,120,2136	0/0:25,0:25:63.17:0,63,1065	1/1:31,0:31:62.86:539,63,0	1/1:15,0:15:40.33:337,40,0	0/0:35,0:35:99:0,105,1927	0/0:28,0:28:81.26:0,81,1434	1/1:22,1:23:66.90:643,67,0	1/1:16,0:16:44.56:450,45,0	1/1:21,1:22:56.89:511,57,0	1/1:26,1:27:78.88:738,79,0	1/1:27,1:28:83.91:731,84,0	1/1:21,1:22:62.93:553,63,0	1/1:23,0:23:66.52:576,67,0	1/1:13,1:14:39.87:363,40,0	1/1:8,1:9:21:220,21,0	1/1:11,1:12:36.06:404,36,0	0/0:26,0:26:78.27:0,78,1427	0/0:26,0:26:75.25:0,75,1366	1/1:10,2:12:23.35:243,23,0	1/1:22,1:23:65.66:623,66,0	1/1:11,1:13:36.02:400,36,0	1/1:11,3:14:23.46:186,23,0	1/1:9,0:9:26.99:232,27,0	0/0:31,0:31:60.55:0,61,1642	0/0:22,0:22:66.23:0,66,1227	0/0:11,0:11:33.11:0,33,615
chr10	82319051	.	TTGA	T	13653.38	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=20.326;DP=605;FS=0.000;HRun=0;HaplotypeScore=216.5638;InbreedingCoeff=0.9981;MQ=91.71;MQ0=0;MQRankSum=-20.263;QD=43.90;ReadPosRankSum=6.936;VQSLOD=5.3602;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,166,3854	1/1:0,8:8:24.08:402,24,0	0/0:40,0:40:99:0,114,2532	0/0:24,0:24:66.22:0,66,1434	1/1:0,29:29:57.19:933,57,0	1/1:1,15:16:48.16:753,48,0	0/0:33,0:33:99:0,99,2247	0/0:25,0:25:75.25:0,75,1683	1/1:1,21:22:64.77:1038,65,0	1/1:0,12:13:39.13:662,39,0	1/1:2,20:22:60.19:943,60,0	1/1:1,23:24:71.82:1120,72,0	1/1:1,27:28:83.77:1362,84,0	1/1:1,21:22:65.03:1032,65,0	1/1:1,22:23:69.22:1089,69,0	1/1:2,13:15:44.63:672,45,0	1/1:1,8:9:20.28:308,20,0	1/1:1,10:11:33.10:542,33,0	0/0:25,0:25:75.25:0,75,1702	0/0:26,0:26:78.25:0,78,1770	1/1:2,10:12:23.74:400,24,0	1/1:1,21:22:66.21:1050,66,0	1/1:3,10:13:36.06:507,36,0	1/1:3,10:13:23.91:391,24,0	1/1:0,9:9:27.09:451,27,0	0/0:33,1:34:52.42:0,52,2204	0/0:21,0:21:63.22:0,63,1486	0/0:11,0:11:33.11:0,33,772
chr10	82319055	.	T	TC	7768.53	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=20.582;DP=655;FS=2.459;HRun=0;HaplotypeScore=239.8609;InbreedingCoeff=0.9995;MQ=87.94;MQ0=0;MQRankSum=-20.314;QD=21.52;ReadPosRankSum=5.605;VQSLOD=4.6205;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,166,2289	1/1:11,0:11:32.96:281,33,0	0/0:39,0:39:99:0,114,1485	0/0:24,0:24:69.15:0,69,880	1/1:30,2:32:56.78:437,57,0	1/1:18,0:18:50.92:427,51,0	0/0:32,0:32:96.31:0,96,1328	0/0:24,0:24:72.23:0,72,993	1/1:28,0:28:80.88:695,81,0	1/1:15,0:15:44.22:379,44,0	1/1:24,1:25:59.78:466,60,0	1/1:27,0:27:79.13:688,79,0	1/1:31,0:31:89.77:736,90,0	1/1:24,0:24:71.82:587,72,0	1/1:25,1:26:69.91:574,70,0	1/1:15,0:15:44.93:392,45,0	1/1:15,0:15:26.94:220,27,0	1/1:15,0:15:35.01:282,35,0	0/0:26,0:26:75.23:0,75,1028	0/0:25,0:25:75.24:0,75,1031	1/1:14,0:14:35.96:315,36,0	1/1:24,0:24:62.75:492,63,0	1/1:15,0:15:33.83:308,34,0	1/1:16,0:16:35.86:272,36,0	1/1:10,0:10:26.94:217,27,0	0/0:35,0:35:47.84:0,48,1285	0/0:23,0:23:66.22:0,66,922	0/0:11,0:11:33.08:0,33,442
chr10	82319424	.	T	TA	13967.76	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.921;DP=687;FS=2.706;HRun=11;HaplotypeScore=66.7060;InbreedingCoeff=0.9728;MQ=70.50;MQ0=0;MQRankSum=-4.329;QD=21.13;ReadPosRankSum=2.481;VQSLOD=5.8631;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:28:51.59:675,52,0	1/1:4,11:15:33.07:335,33,0	0/0:12,0:14:16:0,16,104	0/0:10,0:12:17.79:0,18,118	1/1:4,28:32:57.89:757,58,0	1/1:8,27:35:42.89:616,43,0	1/1:2,15:17:30.22:331,30,0	1/1:11,25:37:72.45:715,72,0	1/1:3,18:21:42.08:426,42,0	1/1:9,35:45:87.82:1057,88,0	1/1:6,20:28:62.92:612,63,0	1/1:7,16:23:51.09:511,51,0	1/1:4,15:19:38.95:396,39,0	1/1:4,9:13:33.02:320,33,0	1/1:5,20:25:27.88:464,28,0	1/1:2,18:20:38.92:396,39,0	1/1:4,15:18:21.85:403,22,0	1/1:4,15:19:21.85:403,22,0	1/1:2,5:8:18.03:181,18,0	1/1:8,28:36:54.89:727,55,0	1/1:4,12:16:27.05:274,27,0	1/1:2,29:31:73.39:734,73,0	1/1:6,13:20:15.67:326,16,0	1/1:2,19:22:53.94:532,54,0	1/1:6,26:32:45.90:647,46,0	1/1:8,27:35:57.92:769,58,0	1/1:8,32:40:72.79:904,73,0	1/1:1,22:23:45.09:457,45,0
chr10	82319597	.	C	CACA	27735.23	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-16.943;DP=804;FS=5.230;HRun=0;HaplotypeScore=102.0729;InbreedingCoeff=0.9997;MQ=85.57;MQ0=0;MQRankSum=-6.107;QD=53.23;ReadPosRankSum=4.732;VQSLOD=7.0448;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:96.31:0,96,1544	1/1:2,9:11:24.08:535,24,0	0/0:30,0:30:72.22:0,72,1140	0/0:26,0:26:63.21:0,63,1008	1/1:4,25:31:69.19:1494,69,0	1/1:4,22:26:63.21:1348,63,0	0/0:19,0:19:57.19:0,57,931	0/0:22,0:22:48.16:0,48,762	1/1:2,34:36:99:2275,102,0	1/1:8,37:47:99:2561,120,0	1/1:6,26:32:72.20:1488,72,0	1/1:2,29:31:75.26:1629,75,0	1/1:1,19:20:51.18:1139,51,0	1/1:4,27:31:75.26:1675,75,0	1/1:2,31:33:87.30:1915,87,0	1/1:1,32:33:81.28:1809,81,0	1/1:2,17:19:51.18:1138,51,0	1/1:3,15:18:45.15:975,45,0	0/0:23,0:22:57.19:0,57,931	0/0:41,0:41:99:0,108,1739	1/1:6,27:39:78.26:1604,78,0	1/1:2,27:29:75.26:1586,75,0	1/1:3,26:29:75.26:1645,75,0	1/1:2,20:23:48.16:1072,48,0	1/1:2,29:33:84.29:1846,84,0	0/0:32,0:32:96.33:0,96,1569	0/0:40,0:40:99:0,120,1960	0/0:13,0:13:39.06:0,39,558
chr10	82320877	.	T	TA	8181.38	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-10.566;DP=499;FS=6.021;HRun=7;HaplotypeScore=44.8310;InbreedingCoeff=0.9691;MQ=82.37;MQ0=0;MQRankSum=-5.247;QD=29.75;ReadPosRankSum=4.754;VQSLOD=4.9868;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:29.98:0,30,278	1/1:0,2:2:6.02:72,6,0	0/0:15,0:15:30.02:0,30,283	0/0:19,0:19:47.47:0,47,422	1/1:5,13:18:36.11:435,36,0	1/1:0,29:29:81.25:977,81,0	0/0:18,0:18:45.05:0,45,428	0/0:34,0:33:93.12:0,93,889	1/1:1,10:11:24.07:290,24,0	1/1:2,14:15:42.13:507,42,0	1/1:6,15:21:19.17:515,19,0	1/1:0,14:14:30.09:362,30,0	1/1:1,11:12:33.10:399,33,0	1/1:4,12:17:32.16:429,32,0	1/1:2,7:9:21.06:254,21,0	1/1:1,12:13:33.10:399,33,0	1/1:0,30:30:84.26:1014,84,0	1/1:1,22:23:63.17:748,63,0	0/0:27,0:27:78.12:0,78,753	0/0:39,0:39:99:0,111,1062	1/1:0,8:8:24.07:290,24,0	1/1:1,13:14:33.10:399,33,0	1/1:1,13:14:13.15:440,13,0	1/1:1,10:11:21.06:254,21,0	1/1:0,13:13:33.10:399,33,0	0/0:31,0:31:87.11:0,87,827	0/0:27,0:27:78.09:0,78,741	0/0:3,0:3:9.01:0,9,87
chr10	82321541	.	C	CTGTGTG	7167.20	PASS	AB=0.932;AC=43;AF=0.796;AN=54;BaseQRankSum=-4.940;DP=607;FS=7.879;HRun=0;HaplotypeScore=144.9684;InbreedingCoeff=0.2282;MQ=61.85;MQ0=3;MQRankSum=-0.868;QD=13.76;ReadPosRankSum=-2.008;VQSLOD=3.2168;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:82.69:83,0,294	1/1:18,0:18:29.55:592,30,0	0/0:30,0:20:12.02:0,12,170	0/0:25,0:17:26.91:0,27,395	1/1:17,0:17:15.03:314,15,0	./.	0/1:20,0:19:4.95:5,0,93	0/1:29,0:29:13.65:14,0,200	1/1:4,10:18:2.80:99,3,0	1/1:10,15:32:57.09:1143,57,0	1/1:16,0:18:30.05:595,30,0	1/1:7,8:21:2.77:19,3,0	1/1:5,9:17:8.88:237,9,0	1/1:14,0:14:17.99:302,18,0	1/1:6,11:20:12.04:304,12,0	1/1:23,0:23:14.92:187,15,0	1/1:17,1:17:27.04:490,27,0	1/1:11,0:11:6.02:134,6,0	0/1:23,0:23:49.27:49,0,144	0/1:26,0:26:33.79:34,0,125	1/1:23,0:23:29.96:389,30,0	0/1:2,13:24:0:0,0,0	1/1:16,0:16:21.51:407,22,0	1/1:19,0:18:17.77:311,18,0	1/1:18,0:18:18.03:304,18,0	1/1:4,15:24:47.67:797,48,0	0/1:24,0:23:85.68:107,0,86	1/1:4,5:12:9.03:252,9,0
chr10	82321545	.	G	GTGTGTG	7065.27	PASS	AB=1.000;AC=43;AF=0.796;AN=54;BaseQRankSum=-5.246;DP=589;FS=6.731;HRun=0;HaplotypeScore=136.6924;InbreedingCoeff=0.2332;MQ=56.92;MQ0=4;MQRankSum=-0.681;QD=13.85;ReadPosRankSum=-1.236;VQSLOD=3.6330;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:37:82.94:83,0,294	1/1:16,0:16:26.94:520,27,0	0/0:28,0:18:12.02:0,12,170	0/0:21,0:13:26.91:0,27,395	1/1:16,0:16:15.03:314,15,0	./.	0/1:18,0:17:4.95:5,0,93	0/1:25,0:25:13.65:14,0,200	1/1:18,0:18:2.80:99,3,0	1/1:30,0:30:57.09:1143,57,0	1/1:17,0:17:30.05:595,30,0	1/1:23,0:23:2.77:19,3,0	1/1:16,0:16:8.88:237,9,0	1/1:14,0:14:17.99:302,18,0	1/1:19,0:19:12.04:304,12,0	1/1:15,7:23:14.83:187,15,0	1/1:17,0:16:30.03:513,30,0	1/1:10,0:10:6.02:134,6,0	0/1:23,0:22:12.87:13,0,144	0/1:25,0:25:33.79:34,0,125	1/1:23,0:23:29.96:389,30,0	0/1:26,0:26:0:1,0,0	1/1:17,0:17:21.51:407,22,0	1/1:19,0:18:17.54:310,18,0	1/1:18,0:18:18.03:304,18,0	1/1:24,0:23:47.67:797,48,0	0/1:23,0:22:85.68:107,0,86	1/1:13,0:13:9.03:234,9,0
chr10	82321844	.	GT	G	10647.61	PASS	AB=0.562;AC=49;AF=0.875;AN=56;BaseQRankSum=-0.245;DP=626;FS=2.484;HRun=11;HaplotypeScore=71.1552;InbreedingCoeff=0.4752;MQ=75.51;MQ0=0;MQRankSum=-1.797;QD=17.99;ReadPosRankSum=3.851;VQSLOD=5.9721;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:33:71.91:591,72,0	1/1:1,15:17:14.87:319,15,0	0/0:20,0:21:14.68:0,15,178	0/0:13,0:12:12.17:0,12,152	1/1:5,23:28:27.82:428,28,0	0/1:4,19:24:33.98:363,0,34	1/1:5,19:24:54.86:465,55,0	1/1:4,21:26:64.86:515,65,0	1/1:3,12:15:35.95:296,36,0	1/1:6,23:29:26.98:472,27,0	1/1:3,17:22:48.97:381,49,0	1/1:4,19:23:53.93:443,54,0	0/1:4,15:19:21.83:243,0,22	1/1:2,18:20:41.95:345,42,0	1/1:5,15:20:9.93:288,10,0	1/1:3,18:21:17.63:360,18,0	1/1:2,19:22:23.99:393,24,0	1/1:0,14:14:41.95:345,42,0	0/1:7,18:25:32.91:377,0,33	1/1:3,22:27:57.74:474,58,0	1/1:3,13:16:32.95:271,33,0	1/1:1,17:18:53.94:443,54,0	1/1:2,32:34:71.89:591,72,0	1/1:2,19:21:50.93:419,51,0	1/1:4,27:31:74.91:616,75,0	1/1:2,20:24:35.02:472,35,0	1/1:2,26:28:65.92:542,66,0	1/1:2,9:11:23.97:197,24,0
chr10	82322502	.	C	CCA	5908.69	PASS	AB=0.675;AC=27;AF=0.500;AN=54;BaseQRankSum=-8.000;DP=632;FS=11.018;HRun=0;HaplotypeScore=110.8725;InbreedingCoeff=0.1329;MQ=63.61;MQ0=9;MQRankSum=2.880;QD=13.94;ReadPosRankSum=-0.652;VQSLOD=4.1688;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:36:48.53:0,49,276	0/1:8,6:15:70.89:251,0,71	1/1:43,0:29:2.22:7,2,0	./.	0/1:10,7:17:94.02:105,0,94	1/1:12,11:23:18.06:274,18,0	0/0:10,0:26:36.76:0,37,181	0/0:22,0:28:21.13:0,21,101	1/1:10,8:19:21.07:319,21,0	0/1:16,17:34:50.74:592,0,51	1/1:8,4:13:15.05:223,15,0	1/1:7,8:17:15.05:228,15,0	0/1:9,11:21:34.20:378,0,34	0/1:4,14:19:37.19:335,0,37	0/1:12,10:22:34.20:378,0,34	0/1:8,8:18:6.49:335,0,6	0/1:20,11:32:99:537,0,119	1/1:3,6:9:15.05:228,15,0	0/0:10,0:14:8.16:0,8,37	0/0:7,0:17:21.02:0,21,109	0/1:23,8:33:85.75:286,0,86	0/1:12,8:20:46.20:202,0,46	0/1:10,13:23:28.07:462,0,28	1/1:16,12:29:39.11:554,39,0	1/1:7,7:15:3.92:214,4,0	0/0:19,0:24:32.42:0,32,292	0/0:10,0:22:41.18:0,41,218	0/0:13,0:15:31.16:0,31,319
chr10	82324260	.	C	CTGGTTTTT	17754.71	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-6.999;DP=550;FS=1.894;HRun=0;HaplotypeScore=129.7658;InbreedingCoeff=0.8880;MQ=73.47;MQ0=0;MQRankSum=-12.776;QD=53.64;ReadPosRankSum=0.940;VQSLOD=4.9137;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:84.26:0,84,1960	1/1:4,5:11:12.04:384,12,0	0/0:27,0:24:28.91:0,29,518	0/0:22,0:20:26.99:0,27,530	1/1:7,17:27:56.94:1725,57,0	1/1:9,13:24:33.11:1289,33,0	0/0:22,0:22:42.14:0,42,1027	0/0:36,0:36:63.75:0,64,1470	1/1:4,14:19:36.12:1454,36,0	1/1:7,11:19:36.05:1135,36,0	1/1:9,10:20:36.08:1131,36,0	1/1:3,8:13:21.07:833,21,0	1/1:7,9:16:27.09:1049,27,0	1/1:6,15:22:30.10:1055,30,0	1/1:4,20:25:39.13:1599,39,0	1/1:4,11:17:30.10:1163,30,0	1/1:10,12:22:10.74:848,11,0	1/1:11,1:11:26.92:566,27,0	0/0:17,0:17:36.11:0,36,722	0/0:21,0:21:48.14:0,48,1125	1/1:5,2:10:6.02:203,6,0	1/1:4,7:12:27.05:794,27,0	1/1:4,11:17:34.30:1050,34,0	1/1:11,0:11:12:275,12,0	1/1:5,13:18:30.10:1141,30,0	0/1:16,0:16:61.27:61,0,848	0/0:17,0:17:27.07:0,27,620	0/0:19,0:19:33.11:0,33,831
chr10	82325467	.	T	TA	2797.09	PASS	AB=0.969;AC=14;AF=0.250;AN=56;BaseQRankSum=-9.402;DP=424;FS=11.539;HRun=6;HaplotypeScore=41.4502;InbreedingCoeff=0.7964;MQ=63.25;MQ0=7;MQRankSum=-1.886;QD=22.74;ReadPosRankSum=-1.245;VQSLOD=1.5756;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,15:20:47.36:573,47,0	0/0:7,0:7:15.03:0,15,153	0/1:12,0:6:15.12:15,0,85	0/1:14,0:11:12.26:12,0,62	0/0:29,0:29:75.17:0,75,765	0/0:21,0:21:54.11:0,54,551	1/1:0,5:5:9.03:113,9,0	1/1:3,24:27:72.20:877,72,0	0/0:10,0:10:30.07:0,30,306	0/0:16,0:16:48.10:0,48,485	0/0:12,0:12:36.08:0,36,367	0/0:15,0:15:39.09:0,39,398	0/0:5,0:5:15.03:0,15,152	0/0:12,0:12:36.08:0,36,363	0/0:13,0:13:36.07:0,36,360	0/0:12,0:12:27.05:0,27,275	0/0:20,0:18:45.10:0,45,459	0/0:17,0:17:45.10:0,45,457	1/1:2,9:9:24.08:302,24,0	1/1:0,16:16:48.15:604,48,0	0/0:9,0:9:14.99:0,15,143	0/0:13,0:13:39.09:0,39,397	0/0:14,0:14:36.08:0,36,367	0/0:10,0:10:27.06:0,27,275	0/0:24,0:24:60.12:0,60,604	0/0:24,0:24:69.12:0,69,687	1/1:3,13:16:39.12:491,39,0	0/0:18,0:16:48.09:0,48,481
chr10	82326091	.	TG	T	9297.75	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=19.905;DP=642;FS=1.608;HRun=1;HaplotypeScore=161.9573;InbreedingCoeff=0.9972;MQ=94.34;MQ0=0;MQRankSum=-6.302;QD=27.43;ReadPosRankSum=5.556;VQSLOD=4.6876;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1770	1/1:2,10:12:21.49:298,21,0	0/0:28,0:28:84.22:0,84,1262	0/0:34,0:34:96.96:0,97,1537	1/1:0,22:22:51.03:490,51,0	1/1:1,16:17:51.05:496,51,0	0/0:20,0:20:60.19:0,60,932	0/0:39,0:39:99:0,117,1785	1/1:1,21:22:66.03:620,66,0	1/1:1,29:30:90.15:929,90,0	1/1:2,18:20:56.88:513,57,0	1/1:2,21:23:68.97:651,69,0	1/1:1,12:15:45.02:425,45,0	1/1:3,17:20:59.96:561,60,0	1/1:0,14:14:42.04:414,42,0	1/1:0,15:15:45.02:427,45,0	1/1:0,10:10:29.99:280,30,0	1/1:4,12:16:15.43:394,15,0	0/0:26,0:26:78.25:0,78,1220	0/0:36,0:36:99:0,108,1698	1/1:1,21:22:63.06:610,63,0	1/1:1,25:26:77.94:712,78,0	1/1:1,18:19:56.86:515,57,0	1/1:0,21:21:54.03:521,54,0	1/1:1,14:15:45.03:444,45,0	0/0:32,0:32:96.32:0,96,1509	0/0:29,0:29:87.27:0,87,1362	0/0:22,0:22:66.23:0,66,1054
chr10	82326093	.	TG	T	8228.38	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=20.852;DP=639;FS=0.287;HRun=2;HaplotypeScore=168.4529;InbreedingCoeff=0.9879;MQ=93.95;MQ0=0;MQRankSum=-5.756;QD=24.34;ReadPosRankSum=5.321;VQSLOD=4.4981;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1658	1/1:3,9:12:18.71:250,19,0	0/0:27,0:27:72.22:0,72,1030	0/0:34,0:34:97:0,97,1474	1/1:1,22:23:50.38:437,50,0	1/1:0,16:16:47.97:424,48,0	0/0:21,0:21:63.20:0,63,925	0/0:37,0:37:99:0,108,1581	1/1:0,21:21:62.83:529,63,0	1/1:1,29:30:90:839,90,0	1/1:1,18:19:53.64:437,54,0	1/1:1,21:22:65.79:553,66,0	1/1:3,12:15:44.90:380,45,0	1/1:2,17:19:54.77:471,55,0	1/1:0,14:14:41.94:371,42,0	1/1:0,15:15:44.89:381,45,0	1/1:1,10:11:32.86:271,33,0	1/1:2,12:14:7.79:312,8,0	0/0:26,0:26:78.26:0,78,1169	0/0:35,0:35:99:0,105,1573	1/1:0,21:21:59.96:527,60,0	1/1:4,25:29:86.68:713,87,0	1/1:2,18:20:57.95:475,58,0	1/1:2,21:23:58.70:494,59,0	1/1:0,14:14:41.93:366,42,0	0/0:33,0:33:99:0,99,1445	0/0:29,0:29:84.28:0,84,1259	0/0:22,0:22:66.20:0,66,966
chr10	82327895	.	T	TCACACAAACACA	14428.91	PASS	AB=0.722;AC=38;AF=0.679;AN=56;BaseQRankSum=-2.135;DP=533;FS=1.432;HRun=0;HaplotypeScore=160.6701;InbreedingCoeff=0.6523;MQ=61.68;MQ0=3;MQRankSum=-8.969;QD=38.07;ReadPosRankSum=-4.560;VQSLOD=3.6634;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:39:5.61:0,6,377	1/1:2,6:10:27.09:1436,27,0	0/0:20,0:12:29.99:0,30,369	0/0:23,0:18:34.83:0,35,483	1/1:10,15:29:44.74:601,45,0	1/1:4,11:20:21.07:855,21,0	0/0:7,0:11:22.67:0,23,158	0/1:21,0:21:99:163,0,142	1/1:8,17:27:30.10:1356,30,0	1/1:7,11:22:39.13:1293,39,0	1/1:5,12:21:38.79:689,39,0	1/1:3,6:10:12:479,12,0	1/1:14,0:14:39.11:1008,39,0	1/1:6,6:17:21.07:799,21,0	1/1:6,12:20:24.08:1032,24,0	1/1:4,9:14:18.06:997,18,0	0/1:9,10:20:41.72:278,0,42	1/1:5,10:17:18.53:804,19,0	0/1:10,0:20:9.89:10,0,151	0/0:6,0:17:22.37:0,22,149	1/1:7,0:7:14.95:183,15,0	1/1:2,0:10:2.74:162,3,0	1/1:7,11:19:17.98:557,18,0	1/1:5,6:12:6.01:350,6,0	1/1:6,9:19:31.92:1376,32,0	0/0:27,0:27:80.56:0,81,1608	0/1:8,0:28:0.50:1,0,252	0/0:16,0:17:45.50:0,45,643
chr10	82329483	.	TACACACACACAC	T	3224.61	PASS	AB=0.629;AC=31;AF=0.620;AN=50;BaseQRankSum=3.673;DP=496;FS=10.603;HRun=0;HaplotypeScore=154.4573;InbreedingCoeff=0.5088;MQ=54.68;MQ0=19;MQRankSum=-3.984;QD=11.64;ReadPosRankSum=2.564;VQSLOD=1.9664;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:36.08:0,36,1343	1/1:1,5:7:12.04:374,12,0	./.	0/0:40,0:20:0.47:0,0,1	0/1:5,8:14:16.06:92,0,16	1/1:9,8:18:12.04:349,12,0	0/0:17,0:26:14.92:0,15,624	0/0:26,0:24:30.03:0,30,829	1/1:9,6:15:2.94:103,3,0	1/1:10,3:12:9.03:187,9,0	1/1:3,8:11:8.92:283,9,0	1/1:8,5:13:2.64:103,3,0	0/1:6,6:12:0:0,0,0	1/1:10,5:15:6.02:207,6,0	1/1:10,12:22:15.05:517,15,0	1/1:5,5:10:9.50:253,10,0	./.	./.	0/0:10,0:10:9.03:0,9,325	0/0:15,0:16:27.09:0,27,1096	1/1:36,14:49:0.62:1,1,0	1/1:8,11:20:2.33:16,2,0	1/1:11,9:20:6.02:204,6,0	0/0:8,9:17:0:0,0,0	1/1:2,5:7:6.02:207,6,0	0/1:8,0:22:99:404,0,148	0/0:17,0:16:24.04:0,24,671	1/1:3,0:8:3.01:84,3,0
chr10	82329804	.	C	CATAG	1403.16	PASS	AB=0.895;AC=14;AF=0.292;AN=48;BaseQRankSum=-2.921;DP=388;FS=4.129;HRun=0;HaplotypeScore=87.7393;InbreedingCoeff=0.6641;MQ=53.56;MQ0=6;MQRankSum=-0.339;QD=15.09;ReadPosRankSum=-3.465;VQSLOD=2.4152;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:30.05:0,30,423	1/1:4,3:7:9.03:147,9,0	./.	./.	0/0:17,0:17:33.11:0,33,493	0/0:2,0:12:23.55:0,24,223	0/0:13,0:14:12.51:0,13,175	./.	0/1:13,1:14:54.17:54,0,142	1/1:3,7:11:24.07:509,24,0	1/1:9,5:15:15.94:336,16,0	0/0:5,0:5:6.02:0,6,90	0/0:10,0:10:15.05:0,15,223	0/0:9,0:9:18.06:0,18,270	1/1:3,0:4:6.02:103,6,0	0/0:5,0:5:9.03:0,9,135	1/1:7,4:11:9.03:207,9,0	0/0:10,0:15:13.73:0,14,115	./.	0/0:15,0:15:24.07:0,24,338	0/0:19,0:20:8.32:0,8,135	0/1:15,2:18:57.36:57,0,123	0/0:15,0:16:23.86:0,24,344	0/0:17,0:17:18.06:0,18,271	1/1:5,0:13:9.03:156,9,0	0/0:7,0:14:11.36:0,11,111	0/0:13,0:13:27.09:0,27,407	0/0:7,0:12:8.50:0,9,65
chr10	82330504	.	ATTT	A	509.18	PASS	AC=14;AF=0.700;AN=20;BaseQRankSum=-2.180;DP=137;FS=0.000;HRun=14;HaplotypeScore=26.4447;InbreedingCoeff=0.5755;MQ=17.48;MQ0=76;MQRankSum=0.607;QD=13.06;ReadPosRankSum=0.876;VQSLOD=-0.6367;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,1:2:3.01:35,3,0	./.	./.	1/1:4,4:7:3:35,3,0	./.	./.	0/0:7,0:3:4.53:0,5,25	./.	1/1:2,1:2:3.01:35,3,0	1/1:3,5:5:12.02:140,12,0	./.	./.	./.	./.	./.	./.	./.	./.	0/0:8,0:11:19.18:0,19,169	./.	1/1:3,1:3:2.99:35,3,0	1/1:2,7:8:14.94:156,15,0	./.	1/1:0,5:5:15.04:175,15,0	./.	./.	0/0:8,0:3:5.98:0,6,46
chr10	82337065	.	A	AAC	1557.80	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.679;DP=669;FS=1.377;HRun=0;HaplotypeScore=110.2353;InbreedingCoeff=0.9929;MQ=66.56;MQ0=4;MQRankSum=2.610;QD=31.79;ReadPosRankSum=-0.460;VQSLOD=5.1902;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:95.98:0,96,1119	0/0:19,0:19:51.16:0,51,623	0/0:40,0:23:32.06:0,32,338	0/0:44,0:33:38.04:0,38,465	0/0:19,0:19:42.06:0,42,471	0/0:12,0:12:21.07:0,21,257	0/0:24,0:24:57.17:0,57,690	0/0:30,0:30:63.13:0,63,752	0/0:17,0:18:41.96:0,42,490	0/0:24,0:24:51.12:0,51,607	0/0:12,0:12:30.02:0,30,334	0/0:21,0:21:48.11:0,48,570	0/0:16,0:16:45.14:0,45,550	0/0:21,0:21:57.18:0,57,694	0/0:21,0:21:45.14:0,45,550	0/0:15,0:15:39.11:0,39,465	0/0:15,0:15:39.08:0,39,449	0/0:16,0:16:48.07:0,48,553	0/0:18,0:18:44.95:0,45,507	0/0:19,0:19:42.13:0,42,513	0/0:41,0:41:99:0,102,1215	0/0:29,0:29:78.15:0,78,918	0/0:17,0:17:39.10:0,39,456	0/0:47,0:47:87.27:0,87,1062	0/0:9,0:9:18.06:0,18,220	1/1:6,26:33:81.20:1193,81,0	0/0:28,0:28:66.19:0,66,795	1/1:3,11:14:30.10:486,30,0
chr10	82339171	.	G	GTT	3565.47	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-2.144;DP=231;FS=3.838;HRun=6;HaplotypeScore=40.5576;InbreedingCoeff=0.7869;MQ=63.95;MQ0=2;MQRankSum=-3.591;QD=35.65;ReadPosRankSum=1.679;VQSLOD=2.9135;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:38.79:0,39,461	1/1:1,0:2:5.61:46,6,0	0/0:29,0:10:16.49:0,16,133	0/0:19,0:8:2.55:0,3,35	1/1:1,2:3:8.95:92,9,0	1/1:0,5:8:14.97:220,15,0	0/0:10,0:10:24.07:0,24,292	0/0:11,0:11:8.93:0,9,206	1/1:5,8:13:36.12:566,36,0	1/1:1,7:8:21.06:330,21,0	1/1:0,4:4:12.04:203,12,0	1/1:1,0:1:2.98:21,3,0	1/1:0,3:3:6.02:101,6,0	1/1:4,1:5:9.03:136,9,0	1/1:1,3:4:11.40:160,11,0	1/1:4,1:5:15.04:201,15,0	1/1:3,13:17:30.10:501,30,0	1/1:0,5:5:15.05:253,15,0	0/0:9,0:9:24.07:0,24,292	0/0:3,0:3:5.85:0,6,73	1/1:0,7:7:18.06:305,18,0	1/1:0,1:2:3.01:51,3,0	1/1:3,0:3:6.01:74,6,0	1/1:1,5:6:14.84:253,15,0	1/1:2,2:4:3.48:52,3,0	0/0:7,0:7:18.05:0,18,218	0/0:12,0:11:30.04:0,30,346	0/0:10,0:10:25.72:0,26,325
chr10	82340503	.	TA	T	11963.45	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=13.775;DP=601;FS=1.397;HRun=5;HaplotypeScore=59.9748;InbreedingCoeff=0.9958;MQ=75.04;MQ0=0;MQRankSum=-1.872;QD=31.24;ReadPosRankSum=4.048;VQSLOD=5.4073;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.29:0,93,1254	1/1:0,7:7:21.06:238,21,0	0/0:22,0:21:60.16:0,60,759	0/0:6,0:6:18.06:0,18,225	1/1:2,30:32:90.22:1008,90,0	1/1:2,33:35:87.25:987,87,0	0/0:5,0:5:15.05:0,15,205	0/0:29,0:29:72.22:0,72,957	1/1:0,23:23:69.20:783,69,0	1/1:1,16:17:48.12:534,48,0	1/1:2,27:29:78.14:867,78,0	1/1:2,16:18:48.14:545,48,0	1/1:1,14:15:45.12:502,45,0	1/1:0,14:14:42.12:476,42,0	1/1:2,20:22:54.15:612,54,0	1/1:1,17:18:51.15:579,51,0	1/1:1,24:25:69.20:783,69,0	1/1:0,20:20:60.17:680,60,0	0/0:24,0:24:69.20:0,69,909	0/0:36,0:36:99:0,105,1401	1/1:0,13:13:33.09:374,33,0	1/1:1,18:19:48.14:545,48,0	1/1:1,26:27:75.21:851,75,0	1/1:0,13:13:39.11:442,39,0	1/1:0,36:36:99:1157,102,0	0/0:28,0:28:78.26:0,78,1067	0/0:25,0:25:72.24:0,72,985	0/0:12,0:12:36.12:0,36,491
chr10	82341159	.	AGGCTGAATGT	A	23671.41	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=17.127;DP=627;FS=0.655;HRun=0;HaplotypeScore=202.1322;InbreedingCoeff=0.9905;MQ=82.96;MQ0=0;MQRankSum=-18.731;QD=70.87;ReadPosRankSum=6.649;VQSLOD=4.3579;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.30:0,87,4436	1/1:1,10:11:27.09:881,27,0	0/0:27,0:27:69.23:0,69,3069	0/0:24,0:24:66.16:0,66,2728	1/1:0,24:24:66.18:2014,66,0	1/1:4,23:26:54.19:1760,54,0	0/0:24,0:24:66.21:0,66,3090	0/0:38,0:38:99:0,99,4385	1/1:2,23:25:57.20:1860,57,0	1/1:1,22:23:66.21:1974,66,0	1/1:1,26:27:72.12:2098,72,0	1/1:1,14:15:33.11:1068,33,0	1/1:2,17:19:51.18:1664,51,0	1/1:4,20:24:54.19:1762,54,0	1/1:1,13:14:33.11:1077,33,0	1/1:1,19:20:48.16:1566,48,0	1/1:3,9:12:18.06:587,18,0	1/1:0,9:9:21.07:685,21,0	0/0:30,0:30:81.28:0,81,3830	0/0:33,0:33:93.32:0,93,4363	1/1:7,8:15:12.04:374,12,0	1/1:4,20:24:51.18:1662,51,0	1/1:2,11:13:21.07:685,21,0	1/1:4,8:12:15.05:488,15,0	1/1:1,19:20:45.15:1467,45,0	0/0:29,0:29:84.28:0,84,3906	0/0:39,0:39:99:0,111,5503	0/0:17,0:17:51.17:0,51,2480
chr10	82341903	.	T	TA	9357.98	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-12.907;DP=556;FS=5.377;HRun=8;HaplotypeScore=56.2653;InbreedingCoeff=0.9326;MQ=73.82;MQ0=0;MQRankSum=-1.364;QD=26.51;ReadPosRankSum=1.957;VQSLOD=5.7335;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,129,1173	1/1:1,9:10:21.06:242,21,0	0/1:10,0:10:7.03:7,0,81	0/0:17,0:17:38.67:0,39,329	1/1:3,23:26:71.88:798,72,0	1/1:2,18:20:45.13:519,45,0	0/0:16,0:16:45.02:0,45,412	0/0:22,0:22:44.97:0,45,404	1/1:3,19:22:42.12:485,42,0	1/1:4,24:28:72.17:801,72,0	1/1:4,21:25:66.11:730,66,0	1/1:2,13:15:27.08:312,27,0	1/1:0,16:16:36.10:415,36,0	1/1:3,11:14:33.10:381,33,0	1/1:0,17:17:45.13:519,45,0	1/1:1,10:11:26.99:312,27,0	1/1:1,24:25:62.77:702,63,0	1/1:2,17:19:48.14:554,48,0	0/0:23,0:23:65.99:0,66,593	0/0:33,0:33:87.03:0,87,796	1/1:2,21:23:51.15:588,51,0	1/1:1,18:19:54.16:619,54,0	1/1:2,15:17:40.47:453,40,0	1/1:4,18:22:45.09:505,45,0	1/1:1,13:14:36.11:415,36,0	0/0:19,0:18:48.02:0,48,439	0/0:17,0:17:33.01:0,33,302	0/0:10,0:10:30.02:0,30,274
chr10	82342758	.	GATACAT	G	168.69	PASS	AB=0.867;AC=9;AF=0.281;AN=32;BaseQRankSum=3.346;DP=143;FS=0.000;HRun=0;HaplotypeScore=52.0829;InbreedingCoeff=0.0875;MQ=76.16;MQ0=6;MQRankSum=-3.213;QD=4.33;ReadPosRankSum=-0.067;VQSLOD=1.3318;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:2.99:0,3,86	0/0:2,1:3:0.37:0,0,0	0/0:11,0:6:8.94:0,9,177	0/0:22,0:9:9.68:0,10,178	./.	./.	0/0:1,0:1:3.01:0,3,86	0/0:24,0:23:67.81:0,68,1579	./.	1/1:2,2:4:2.27:102,2,0	./.	0/1:0,0:1:0:0,0,0	./.	./.	./.	./.	0/1:8,1:3:3.76:50,0,4	0/1:6,0:4:27.18:27,0,32	0/1:5,0:3:27.82:28,0,59	0/0:6,0:6:3.01:0,3,50	./.	./.	0/1:2,1:3:0:0,0,0	./.	./.	0/0:7,0:7:21.07:0,21,438	0/1:4,0:4:0:0,0,0	0/1:6,0:6:56.91:57,0,126
chr10	82342775	.	GTAGATAGA	G	342.67	PASS	AB=0.703;AC=16;AF=0.471;AN=34;BaseQRankSum=1.501;DP=152;FS=0.000;HRun=0;HaplotypeScore=61.2794;InbreedingCoeff=0.4090;MQ=66.92;MQ0=2;MQRankSum=-1.766;QD=5.71;ReadPosRankSum=-0.177;VQSLOD=0.9184;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:4,4:8:0.02:0,0,0	0/0:5,0:5:0.94:0,1,2	./.	./.	0/0:5,0:5:3:0,3,25	0/0:5,0:4:0:0,0,0	./.	0/0:25,0:24:1.82:0,2,5	./.	1/1:3,0:3:6.02:101,6,0	1/1:8,0:8:0.47:1,0,0	1/1:2,0:2:0.44:1,0,0	0/0:1,0:1:0:0,0,0	./.	./.	./.	1/1:10,0:4:3.01:54,3,0	0/0:6,0:4:3.01:0,3,60	1/1:4,2:4:5.99:131,6,0	0/1:1,5:6:0:0,0,0	./.	./.	0/1:4,0:4:0:0,0,0	./.	./.	0/0:4,0:7:14.64:0,15,119	0/1:2,4:6:0:0,0,0	1/1:1,6:7:6.02:146,6,0
chr10	82342828	.	TAG	T	598.70	PASS	AB=0.890;AC=27;AF=0.563;AN=48;BaseQRankSum=6.078;DP=225;FS=0.000;HRun=0;HaplotypeScore=57.0502;InbreedingCoeff=0.4392;MQ=55.94;MQ0=4;MQRankSum=1.238;QD=4.87;ReadPosRankSum=2.856;VQSLOD=1.9454;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:17.91:0,18,257	1/1:3,1:4:5.99:48,6,0	0/0:9,0:6:16.30:0,16,218	0/0:8,0:5:12.04:0,12,160	1/1:2,6:8:9.89:82,10,0	1/1:10,0:9:2.73:25,3,0	0/0:4,0:4:12.04:0,12,185	0/0:14,0:14:42.02:0,42,536	./.	0/1:3,11:14:9.85:264,0,10	1/1:10,1:11:0.47:1,0,0	1/1:2,1:3:3:25,3,0	1/1:0,2:2:3.01:33,3,0	1/1:0,4:4:3:26,3,0	1/1:0,6:6:3.01:32,3,0	1/1:1,3:4:3:25,3,0	1/1:15,1:10:9:86,9,0	0/1:11,0:9:11.98:47,0,12	0/1:4,0:3:2.32:2,0,13	0/0:12,0:12:20.72:0,21,300	./.	1/1:4,3:7:6:53,6,0	0/1:7,1:6:0:0,0,0	./.	./.	0/1:11,0:11:2.39:2,0,234	0/0:7,0:7:8.82:0,9,128	0/0:11,0:10:12.59:0,13,222
chr10	82342832	.	T	TAC	1338.19	PASS	AB=0.579;AC=25;AF=0.521;AN=48;BaseQRankSum=2.651;DP=237;FS=0.000;HRun=0;HaplotypeScore=57.6269;InbreedingCoeff=0.6855;MQ=56.83;MQ0=2;MQRankSum=0.894;QD=12.99;ReadPosRankSum=2.858;VQSLOD=3.1413;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:21.07:0,21,266	1/1:1,4:5:5.92:100,6,0	0/0:9,0:6:17.95:0,18,207	0/0:9,0:6:15.05:0,15,190	1/1:8,0:8:12.04:200,12,0	1/1:4,7:10:3.90:51,4,0	0/0:4,0:4:12.04:0,12,153	0/0:16,0:16:42.11:0,42,507	./.	1/1:14,0:14:26.16:576,26,0	0/1:3,8:11:0.08:0,0,0	1/1:1,2:3:3:50,3,0	1/1:2,0:2:3.01:50,3,0	1/1:4,0:4:3.01:50,3,0	1/1:6,0:6:3.01:50,3,0	1/1:4,0:4:3.01:50,3,0	1/1:1,15:10:9.03:129,9,0	1/1:1,11:10:6.02:100,6,0	0/0:7,0:7:8.93:0,9,80	0/0:12,0:12:21.07:0,21,268	./.	1/1:4,3:7:6.02:100,6,0	0/0:3,4:6:0:0,0,0	./.	./.	0/0:9,0:9:24.06:0,24,285	0/0:7,0:7:9.03:0,9,115	0/0:11,0:10:21.05:0,21,247
chr10	82344705	.	AT	A	6805.43	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.807;DP=682;FS=0.000;HRun=3;HaplotypeScore=67.4353;InbreedingCoeff=0.9992;MQ=87.68;MQ0=0;MQRankSum=-2.125;QD=32.72;ReadPosRankSum=4.356;VQSLOD=5.0839;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.27:0,87,1231	1/1:0,7:7:21.07:260,21,0	0/0:25,0:25:66.07:0,66,804	0/0:22,0:22:56.94:0,57,707	1/1:0,21:21:60.19:744,60,0	0/0:18,0:18:54.18:0,54,777	0/0:18,0:18:54.18:0,54,778	0/0:43,0:43:99:0,120,1681	0/0:28,0:28:81.22:0,81,1104	1/1:1,23:24:69.22:854,69,0	1/1:1,28:29:78.24:967,78,0	0/0:18,0:18:51.17:0,51,734	1/1:1,18:19:45.14:558,45,0	1/1:1,23:24:60.19:744,60,0	1/1:0,28:28:72.23:893,72,0	0/0:22,0:22:63.21:0,63,907	1/1:1,30:31:84.26:1041,84,0	0/0:28,0:28:81.27:0,81,1166	0/0:18,0:18:54.14:0,54,754	0/0:26,0:26:75.24:0,75,1060	0/0:25,0:25:69.23:0,69,994	1/1:2,23:25:60.19:744,60,0	0/0:27,0:27:75.25:0,75,1080	0/0:22,0:22:66.22:0,66,948	0/0:25,0:25:72.24:0,72,1021	0/0:32,1:33:59.10:0,59,1270	0/0:37,0:37:99:0,108,1539	0/0:9,0:9:27.09:0,27,389
chr10	82347541	.	C	CT	8374.32	PASS	AB=0.818;AC=36;AF=0.643;AN=56;BaseQRankSum=-12.009;DP=600;FS=4.131;HRun=10;HaplotypeScore=68.0652;InbreedingCoeff=0.7782;MQ=72.81;MQ0=0;MQRankSum=-0.918;QD=21.04;ReadPosRankSum=2.761;VQSLOD=5.9904;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:86.86:0,87,714	1/1:1,10:11:5.39:251,5,0	0/0:19,0:20:13.05:0,13,219	0/1:17,0:17:24.53:25,0,175	1/1:2,35:37:96.24:1017,96,0	1/1:4,13:17:36.09:384,36,0	0/0:21,0:22:55.96:0,56,447	0/0:22,0:25:62.80:0,63,482	1/1:3,19:22:7.86:480,8,0	1/1:6,20:26:35.57:573,36,0	1/1:2,9:11:24.06:256,24,0	1/1:6,18:24:45.11:480,45,0	1/1:2,14:16:36.09:384,36,0	1/1:1,16:18:42.10:442,42,0	1/1:7,17:25:29.77:502,30,0	1/1:2,15:17:11.45:327,11,0	1/1:3,16:19:17.45:385,17,0	1/1:5,16:20:42.11:447,42,0	0/0:10,0:13:23.95:0,24,156	0/0:25,0:25:47.89:0,48,387	1/1:5,26:31:69.17:736,69,0	1/1:6,14:20:20.42:410,20,0	1/1:5,24:29:16.53:584,17,0	1/1:4,12:16:31.81:380,32,0	0/1:9,12:20:10.19:313,0,10	0/0:22,1:26:1.74:0,2,332	0/0:27,0:26:56.88:0,57,462	0/0:11,0:11:29.97:0,30,246
chr10	82348114	.	TA	T	10999.39	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-4.270;DP=664;FS=0.979;HRun=11;HaplotypeScore=77.4520;InbreedingCoeff=0.6671;MQ=69.54;MQ0=0;MQRankSum=-1.191;QD=17.05;ReadPosRankSum=3.175;VQSLOD=5.8295;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,28:34:58.43:618,58,0	1/1:1,6:7:14.98:123,15,0	0/0:19,0:13:8.76:0,9,149	0/1:18,0:14:6.28:6,0,133	1/1:1,29:30:80.76:651,81,0	1/1:6,35:43:99:800,100,0	1/1:3,17:20:41.91:345,42,0	1/1:10,18:28:53.88:436,54,0	1/1:2,19:21:50.94:419,51,0	1/1:6,26:33:19.23:546,19,0	1/1:3,17:20:47.93:394,48,0	1/1:1,17:18:35.96:296,36,0	1/1:2,20:22:50.76:411,51,0	1/1:1,18:19:44.95:369,45,0	1/1:3,26:29:62.92:517,63,0	1/1:5,24:30:61.94:496,62,0	1/1:1,27:28:65.92:542,66,0	1/1:3,18:21:47.94:394,48,0	1/1:5,13:20:43.96:346,44,0	1/1:4,30:34:74.79:608,75,0	1/1:1,14:15:38.95:320,39,0	1/1:4,12:16:32.92:271,33,0	1/1:4,9:13:23.96:197,24,0	1/1:1,18:19:50.94:419,51,0	1/1:2,21:23:43.98:349,44,0	1/1:2,2:33:59.72:208,60,0	1/1:1,38:39:99:862,105,0	1/1:0,0:12:20.37:59,20,0
chr10	82348558	.	CTCTCTCTG	C	1185.69	PASS	AB=0.767;AC=23;AF=0.548;AN=42;BaseQRankSum=-0.079;DP=705;FS=4.873;HRun=0;HaplotypeScore=193.2731;InbreedingCoeff=0.5382;MQ=68.24;MQ0=11;MQRankSum=-1.386;QD=3.49;ReadPosRankSum=0.502;VQSLOD=2.0667;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:33.07:0,33,1050	0/1:11,5:16:0:0,0,0	./.	./.	1/1:11,8:19:0.47:1,0,0	./.	0/0:30,0:29:11.96:0,12,100	0/0:34,0:33:0:0,0,0	1/1:15,1:16:5.93:40,6,0	1/1:25,0:25:11.70:184,12,0	0/1:18,3:20:0:0,0,0	0/1:16,7:23:0:0,0,0	1/1:18,0:17:14.99:192,15,0	./.	0/1:18,11:29:0.02:0,0,0	./.	1/1:20,13:32:6.49:145,6,0	0/1:25,9:34:17.98:67,0,18	0/0:16,0:16:9.03:0,9,224	0/0:16,0:16:21.03:0,21,322	1/1:34,0:33:18.03:326,18,0	0/1:6,12:18:0.11:1,0,0	0/1:14,3:17:0:0,0,0	./.	./.	1/1:21,7:27:20.94:344,21,0	0/0:28,0:28:33.09:0,33,857	1/1:6,3:9:0.56:14,1,0
chr10	82351674	.	TAAAA	T	3891.74	PASS	AB=0.629;AC=31;AF=0.554;AN=56;BaseQRankSum=-2.341;DP=369;FS=2.977;HRun=17;HaplotypeScore=71.3168;InbreedingCoeff=0.6657;MQ=61.70;MQ0=15;MQRankSum=-1.439;QD=18.53;ReadPosRankSum=6.967;VQSLOD=1.3683;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:24:44.39:0,44,338	1/1:1,5:6:11.99:137,12,0	0/0:13,0:6:16.92:0,17,146	0/0:14,0:7:12.51:0,13,219	1/1:9,20:28:39.71:496,40,0	0/1:5,12:15:9.48:312,0,9	0/0:2,0:7:14.77:0,15,102	0/0:21,0:25:27.96:0,28,246	1/1:3,6:10:22.14:254,22,0	1/1:7,10:18:16.01:383,16,0	1/1:4,8:12:14.79:190,15,0	1/1:3,5:8:11.84:152,12,0	0/0:3,2:5:0:0,0,0	1/1:2,2:4:2.90:38,3,0	1/1:1,5:7:15:175,15,0	1/1:2,5:7:11.94:152,12,0	1/1:6,14:21:38.42:462,38,0	0/1:5,10:14:27.48:242,0,27	0/0:9,0:13:21.52:0,22,201	0/0:9,0:21:45.39:0,45,312	0/0:1,0:1:0:0,0,0	1/1:0,0:1:2.99:23,3,0	1/1:2,8:10:17.66:228,18,0	1/1:0,7:7:21.07:266,21,0	1/1:7,13:18:29.88:380,30,0	0/1:8,0:13:3.43:3,0,29	0/0:6,0:15:31.93:0,32,209	0/0:10,0:10:5.15:0,5,128
chr10	82352000	.	T	TA	3852.01	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-10.902;DP=520;FS=7.691;HRun=10;HaplotypeScore=51.0548;InbreedingCoeff=0.8972;MQ=74.14;MQ0=0;MQRankSum=1.538;QD=20.60;ReadPosRankSum=-1.924;VQSLOD=3.6855;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,20:26:29.49:519,29,0	0/0:11,0:11:1.14:0,1,164	0/1:14,0:14:4.79:5,0,96	0/0:7,0:7:14.94:0,15,117	0/0:23,0:24:67.88:0,68,540	0/0:21,0:21:47.93:0,48,394	1/1:7,13:20:27.07:288,27,0	1/1:9,15:24:42.06:429,42,0	0/0:18,0:18:47.92:0,48,394	0/0:26,1:27:39.84:0,40,520	0/0:26,0:26:74.25:0,74,595	0/0:18,0:18:50.92:0,51,415	0/0:19,0:19:38.92:0,39,320	0/0:10,0:10:29.95:0,30,242	0/0:15,0:16:40.94:0,41,320	0/0:17,0:17:41.93:0,42,343	0/0:19,0:19:49.17:0,49,394	0/0:13,0:13:38.96:0,39,320	1/1:2,8:10:24.05:249,24,0	1/1:4,19:23:43.23:521,43,0	0/0:18,0:18:41.90:0,42,344	0/0:15,0:15:38.93:0,39,320	0/0:19,0:19:53.93:0,54,443	0/0:14,0:14:38.95:0,39,320	0/0:21,0:21:59.73:0,60,481	1/1:1,21:22:63.10:646,63,0	1/1:3,25:28:60.06:638,60,0	1/1:3,17:19:54.10:558,54,0
chr10	82352728	.	ATCCTCATCTTCC	A	1426.97	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=6.664;DP=807;FS=2.041;HRun=0;HaplotypeScore=271.1213;InbreedingCoeff=0.9993;MQ=67.96;MQ0=1;MQRankSum=-5.293;QD=62.04;ReadPosRankSum=1.748;VQSLOD=3.2924;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,138,7068	0/0:12,0:12:30.09:0,30,1453	0/0:36,0:36:51.12:0,51,1604	0/0:38,0:35:52.40:0,52,1765	0/0:21,0:21:51.18:0,51,2506	0/0:22,0:22:57.15:0,57,2727	0/0:31,0:31:66.21:0,66,3467	0/0:39,0:39:78.26:0,78,3796	0/0:32,0:32:75.26:0,75,4108	0/0:25,0:25:63.19:0,63,3054	0/0:16,0:16:39.13:0,39,1877	0/0:43,0:43:99:0,114,6049	0/0:28,0:28:69.20:0,69,3680	0/0:23,0:23:60.19:0,60,2947	0/0:29,0:29:75.20:0,75,3811	0/0:32,0:32:87.27:0,87,4442	0/0:42,0:42:99:0,108,4749	0/0:36,0:36:86.48:0,86,4577	0/0:24,0:23:39.09:0,39,1450	0/0:23,0:23:48.12:0,48,2320	0/0:53,0:53:99:0,138,7030	0/0:24,0:24:60.21:0,60,2971	0/0:29,0:29:72.23:0,72,3323	0/0:35,0:34:78.25:0,78,4205	0/0:19,0:19:51.18:0,51,2720	1/1:6,17:23:51.11:1522,51,0	0/0:17,0:17:42.14:0,42,2460	./.
chr10	82353506	.	AACACACAC	A	3486.78	PASS	AB=0.843;AC=37;AF=0.740;AN=50;BaseQRankSum=3.765;DP=659;FS=0.000;HRun=0;HaplotypeScore=173.7467;InbreedingCoeff=0.5132;MQ=64.58;MQ0=7;MQRankSum=-6.225;QD=7.34;ReadPosRankSum=0.828;VQSLOD=2.6009;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:48:27.06:0,27,556	./.	./.	./.	1/1:10,12:24:21.02:232,21,0	1/1:9,9:18:6.02:128,6,0	0/0:22,1:26:30.10:0,30,649	0/0:21,0:21:3.90:0,4,46	1/1:20,6:25:2.91:68,3,0	1/1:10,4:14:9:125,9,0	1/1:7,6:13:8.96:143,9,0	1/1:11,11:23:15:275,15,0	1/1:20,11:33:21.03:442,21,0	1/1:17,3:22:8.60:124,9,0	1/1:22,10:31:24.03:385,24,0	1/1:15,8:25:19.50:297,19,0	1/1:16,7:24:12.04:237,12,0	1/1:13,7:19:6.02:149,6,0	0/0:14,0:15:2.99:0,3,25	0/0:16,0:17:27.09:0,27,947	0/1:42,12:53:0:0,0,0	1/1:14,7:21:9.03:176,9,0	1/1:8,10:18:8.84:155,9,0	1/1:18,10:31:0.25:1,0,0	1/1:14,10:24:5.98:57,6,0	0/1:18,4:22:27.83:335,0,28	0/1:16,0:18:44.89:45,0,673	1/1:5,4:8:6.02:114,6,0
chr10	82354709	.	A	AT	6249.96	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-10.802;DP=623;FS=1.443;HRun=4;HaplotypeScore=106.4483;InbreedingCoeff=0.4536;MQ=80.64;MQ0=0;MQRankSum=-3.181;QD=21.55;ReadPosRankSum=-4.920;VQSLOD=2.6697;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,39:40:93.26:1213,93,0	0/0:7,0:7:15:0,15,49	0/0:25,0:25:46.83:0,47,595	0/0:14,0:14:31.04:0,31,350	0/0:20,0:20:38.76:0,39,137	0/0:27,0:27:1.54:0,2,109	1/1:0,22:22:54.18:720,54,0	1/1:5,35:40:99:1295,105,0	0/0:27,0:27:28.85:0,29,154	0/1:21,0:21:29.12:56,0,29	0/1:18,0:18:14.18:14,0,66	0/0:22,0:22:20.73:0,21,97	0/0:18,0:18:13.36:0,13,102	0/0:18,0:18:33.90:0,34,114	0/0:24,0:24:13.28:0,13,89	0/1:19,0:19:31.28:31,0,63	0/0:27,0:27:30.75:0,31,143	0/0:16,0:16:7.42:0,7,60	1/1:2,19:21:57.12:696,57,0	1/1:2,32:34:90.73:1184,91,0	0/0:26,0:26:0.85:0,1,97	0/0:12,0:12:0.85:0,1,52	0/1:22,0:22:9.43:9,0,94	0/0:21,0:21:15.29:0,15,105	0/1:23,0:23:59.03:59,0,60	0/0:25,0:25:11.80:0,12,94	1/1:4,26:30:74.90:972,75,0	0/0:4,0:4:2.04:0,2,6
chr10	82358022	.	AGAG	A	6188.04	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=17.064;DP=442;FS=2.561;HRun=0;HaplotypeScore=137.3200;InbreedingCoeff=0.9924;MQ=55.14;MQ0=1;MQRankSum=-14.539;QD=31.25;ReadPosRankSum=4.032;VQSLOD=5.5103;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,3021	1/1:0,6:6:18.06:223,18,0	0/0:23,0:22:66.23:0,66,1446	0/0:25,0:24:66.23:0,66,1591	1/1:0,12:12:32.42:353,32,0	1/1:1,14:15:44.81:513,45,0	0/0:28,0:28:81.28:0,81,1967	0/0:36,0:36:99:0,105,2449	1/1:2,14:15:41.14:476,41,0	1/1:2,14:15:45.09:533,45,0	1/1:1,5:6:14.41:153,14,0	1/1:2,13:15:41.77:459,42,0	1/1:1,7:8:24.07:291,24,0	1/1:0,10:10:27.08:325,27,0	1/1:0,9:8:24.08:296,24,0	1/1:1,12:11:33.10:407,33,0	1/1:1,9:9:24.01:261,24,0	1/1:0,11:11:33.11:418,33,0	0/0:18,0:18:54.19:0,54,1305	0/0:20,0:20:60.21:0,60,1428	1/1:3,6:9:22.73:188,23,0	1/1:0,11:11:33.10:394,33,0	1/1:0,7:7:21.06:253,21,0	1/1:1,11:12:26.78:312,27,0	1/1:2,10:12:29.82:336,30,0	0/0:33,0:33:99:0,99,2369	0/0:13,0:13:39.13:0,39,921	0/0:6,0:6:18.06:0,18,444
chr10	82358026	.	TGGCACTA	T	10755.58	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=17.057;DP=434;FS=4.343;HRun=0;HaplotypeScore=151.8768;InbreedingCoeff=0.9920;MQ=50.56;MQ0=1;MQRankSum=-14.864;QD=56.61;ReadPosRankSum=4.491;VQSLOD=4.5244;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,5118	1/1:0,6:6:18.06:391,18,0	0/0:22,0:20:57.20:0,57,2174	0/0:27,0:24:72.25:0,72,2719	1/1:0,12:12:30.10:612,30,0	1/1:1,14:15:45.15:931,45,0	0/0:30,0:30:90.31:0,90,3681	0/0:36,0:36:99:0,105,4185	1/1:2,14:15:45.12:888,45,0	1/1:0,14:13:39.13:849,39,0	1/1:1,5:6:18:302,18,0	1/1:1,13:14:39.13:797,39,0	1/1:1,7:8:24.08:524,24,0	1/1:0,10:10:27.09:577,27,0	1/1:0,9:8:24.08:520,24,0	1/1:1,12:11:33.11:724,33,0	1/1:0,9:8:18.06:386,18,0	1/1:0,11:11:33.11:726,33,0	0/0:18,0:18:54.19:0,54,2217	0/0:19,0:19:57.20:0,57,2372	1/1:0,6:6:18.06:308,18,0	1/1:0,11:11:33.11:701,33,0	1/1:0,7:7:21.07:449,21,0	1/1:1,11:12:24.03:516,24,0	1/1:2,9:11:27.09:555,27,0	0/0:31,0:31:93.32:0,93,3860	0/0:14,0:14:39.13:0,39,1613	0/0:6,0:6:18.06:0,18,754
chr10	82358032	.	TA	T	3926.36	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=17.162;DP=464;FS=4.270;HRun=1;HaplotypeScore=132.9568;InbreedingCoeff=0.9905;MQ=50.78;MQ0=1;MQRankSum=-13.913;QD=18.88;ReadPosRankSum=2.634;VQSLOD=4.1170;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1937	1/1:7,0:7:19.50:143,19,0	0/0:22,0:17:47.89:0,48,707	0/0:28,0:25:64.70:0,65,1026	1/1:16,0:16:37.64:252,38,0	1/1:17,0:17:47.03:341,47,0	0/0:30,0:30:90.29:0,90,1412	0/0:39,0:39:99:0,114,1747	1/1:16,0:15:44.81:343,45,0	1/1:14,2:15:44.78:340,45,0	1/1:5,0:5:14.91:109,15,0	1/1:15,0:15:40.89:285,41,0	1/1:7,3:10:23.86:181,24,0	1/1:10,0:10:26.85:199,27,0	1/1:10,0:9:26.85:202,27,0	1/1:13,0:11:32.87:255,33,0	1/1:9,0:8:17.92:135,18,0	1/1:11,0:11:32.92:265,33,0	0/0:20,0:19:57.18:0,57,887	0/0:22,0:22:63.17:0,63,956	1/1:13,0:13:16.31:117,16,0	1/1:11,0:11:32.80:240,33,0	1/1:7,0:7:20.89:156,21,0	1/1:11,0:11:23.57:180,24,0	1/1:11,0:11:25.25:184,25,0	0/0:32,0:32:96.31:0,96,1482	0/0:15,0:15:45.15:0,45,716	0/0:6,0:6:18.06:0,18,281
chr10	82358419	.	T	TCACACA	7498.56	PASS	AB=0.688;AC=49;AF=0.942;AN=52;BaseQRankSum=-3.426;DP=608;FS=2.025;HRun=0;HaplotypeScore=136.5217;InbreedingCoeff=0.1536;MQ=57.48;MQ0=8;MQRankSum=-2.316;QD=13.58;ReadPosRankSum=-0.855;VQSLOD=4.3312;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:31:15.88:256,16,0	1/1:4,4:8:6.02:193,6,0	./.	./.	1/1:12,1:25:2.72:38,3,0	1/1:8,8:18:3.48:97,3,0	1/1:28,1:39:15.05:392,15,0	1/1:24,0:24:23.75:232,24,0	1/1:2,7:15:18.06:462,18,0	1/1:13,13:28:36.01:653,36,0	1/1:7,7:17:6.02:135,6,0	1/1:10,11:25:21.07:619,21,0	1/1:5,8:13:12.04:387,12,0	1/1:10,3:15:12.93:286,13,0	1/1:12,8:24:24.08:773,24,0	1/1:9,16:25:14.21:472,14,0	1/1:21,9:34:21.50:419,21,0	1/1:11,9:22:23.97:510,24,0	1/1:7,1:15:22.50:348,23,0	1/1:9,0:18:9.03:205,9,0	1/1:12,0:25:5.11:106,5,0	1/1:9,8:19:8.03:230,8,0	1/1:5,7:13:5.94:135,6,0	1/1:16,15:34:7.90:211,8,0	1/1:9,0:18:3.01:78,3,0	0/1:12,0:22:99:103,0,163	1/1:8,0:18:6.49:156,6,0	0/0:0,0:6:3.54:0,4,7
chr10	82359036	.	GC	G	5607.86	PASS	AB=0.625;AC=35;AF=0.625;AN=56;BaseQRankSum=-11.983;DP=517;FS=11.250;HRun=10;HaplotypeScore=71.8246;InbreedingCoeff=0.9052;MQ=80.67;MQ0=0;MQRankSum=-2.139;QD=17.80;ReadPosRankSum=3.907;VQSLOD=4.8297;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:50.89:0,51,209	0/1:4,6:10:12.16:135,0,12	0/0:18,0:18:27.40:0,27,338	0/0:10,0:10:14.01:0,14,90	1/1:3,19:22:13.70:287,14,0	1/1:2,17:19:47.98:417,48,0	0/0:16,0:16:34.82:0,35,143	0/0:35,0:35:66.85:0,67,273	1/1:2,13:15:38.99:339,39,0	1/1:4,13:17:32.95:280,33,0	1/1:7,13:20:32.48:267,32,0	1/1:5,11:16:29.98:260,30,0	1/1:2,8:10:20.98:182,21,0	1/1:4,17:21:53.97:469,54,0	1/1:3,19:21:50.97:443,51,0	1/1:2,10:12:20.27:181,20,0	1/1:5,22:28:59.02:501,59,0	1/1:2,17:19:50.93:435,51,0	0/0:27,0:27:51.13:0,51,215	0/0:22,0:22:54.26:0,54,235	1/1:2,19:21:44.99:391,45,0	1/1:4,12:16:29.99:260,30,0	1/1:7,11:18:29.97:260,30,0	1/1:1,8:10:23.03:188,23,0	1/1:5,14:19:16.74:313,17,0	0/0:17,1:18:6.98:0,7,268	0/0:21,0:21:50.89:0,51,209	0/0:9,0:9:27.02:0,27,270
chr10	82359042	.	C	CT	5138.32	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-15.701;DP=509;FS=36.965;HRun=0;HaplotypeScore=76.7660;InbreedingCoeff=0.9976;MQ=81.42;MQ0=0;MQRankSum=-1.885;QD=33.37;ReadPosRankSum=-0.963;VQSLOD=2.4324;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:57.18:795,57,0	0/0:7,0:7:20.75:0,21,154	0/0:16,0:16:45.09:0,45,538	0/0:12,0:12:32.63:0,33,275	0/0:24,0:24:59.70:0,60,401	0/0:19,0:19:50.29:0,50,326	1/1:0,17:17:39.13:544,39,0	1/1:0,36:36:99:1275,105,0	0/0:14,0:14:41.43:0,41,270	0/0:16,0:16:37.63:0,38,243	0/0:17,0:17:41.46:0,41,281	0/0:12,0:12:32.54:0,33,208	0/0:9,0:9:23.69:0,24,158	0/0:21,0:21:62.21:0,62,415	0/0:21,0:21:58.83:0,59,377	0/0:12,0:12:26.67:0,27,177	0/0:25,0:25:65.05:0,65,420	0/0:19,0:19:53.12:0,53,336	1/1:2,23:25:70.78:863,71,0	1/1:0,27:27:71.83:867,72,0	0/0:21,0:21:40.52:0,41,275	0/0:17,0:17:41.56:0,42,294	0/0:17,0:17:44.54:0,45,311	0/0:9,0:9:23.59:0,24,147	0/0:17,0:17:47.43:0,47,323	0/0:21,0:21:48:0,48,490	1/1:0,21:21:57.19:795,57,0	0/0:9,0:9:27.06:0,27,328
chr10	82361029	.	GA	G	1144.06	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.509;DP=717;FS=3.777;HRun=6;HaplotypeScore=199.2911;InbreedingCoeff=0.9915;MQ=80.15;MQ0=0;MQRankSum=-1.106;QD=27.24;ReadPosRankSum=1.313;VQSLOD=1.0551;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1288	0/0:16,0:16:44.78:0,45,339	0/0:26,0:26:36.90:0,37,734	0/0:20,0:20:31.53:0,32,411	0/0:27,0:27:77.73:0,78,613	0/0:23,0:23:68.75:0,69,543	0/0:17,0:17:48.16:0,48,632	0/0:26,0:26:75.22:0,75,948	0/0:22,0:22:53.29:0,53,405	0/0:36,0:36:99:0,100,642	0/0:29,0:29:86.54:0,87,648	0/0:16,0:16:44.78:0,45,341	0/0:26,0:26:74.75:0,75,598	0/0:20,0:20:56.79:0,57,453	0/0:34,0:34:89.62:0,90,699	0/0:32,0:32:92.52:0,93,695	0/0:29,0:29:77.69:0,78,608	0/0:24,0:24:62.68:0,63,472	0/0:23,0:23:63.20:0,63,828	0/0:24,0:24:63.19:0,63,814	0/0:28,0:28:74.60:0,75,556	0/0:37,0:37:99:0,105,815	0/0:25,0:25:68.71:0,69,542	0/0:23,0:23:65.73:0,66,518	0/0:30,0:30:80.61:0,81,618	1/1:2,35:37:81.46:1101,81,0	0/0:27,0:26:63.16:0,63,808	1/1:0,5:5:15.04:161,15,0
chr10	82361619	.	T	TA	9317.35	PASS	AB=0.577;AC=38;AF=0.679;AN=56;BaseQRankSum=-0.079;DP=647;FS=0.000;HRun=10;HaplotypeScore=89.2245;InbreedingCoeff=0.8052;MQ=78.42;MQ0=0;MQRankSum=-1.841;QD=21.27;ReadPosRankSum=1.969;VQSLOD=5.3817;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:65.89:0,66,542	1/1:1,11:12:27.07:288,27,0	0/0:27,0:28:5.02:0,5,165	0/0:15,0:13:13.11:0,13,126	1/1:3,31:34:90.19:947,90,0	1/1:5,25:30:52.42:630,52,0	0/0:22,0:22:44.93:0,45,369	0/0:27,0:27:68.90:0,69,564	1/1:1,15:16:20.43:410,20,0	1/1:6,27:33:68.96:718,69,0	1/1:8,18:27:11.65:482,12,0	1/1:3,14:17:14.45:359,14,0	0/1:9,23:32:7.77:537,0,8	1/1:3,17:20:39.10:416,39,0	1/1:6,17:23:45.09:471,45,0	1/1:3,12:15:27.07:288,27,0	1/1:4,10:15:5.60:246,6,0	1/1:6,21:27:29.45:506,29,0	0/0:13,0:14:31.97:0,32,252	0/0:33,0:34:79.89:0,80,643	1/1:4,12:16:33.08:345,33,0	1/1:0,27:27:63.16:672,63,0	1/1:6,15:21:38.97:398,39,0	1/1:3,18:21:11.22:490,11,0	1/1:5,18:24:29.30:491,29,0	1/1:5,15:20:45.11:480,45,0	0/0:37,0:36:92.86:0,93,763	0/1:2,6:8:6.60:142,0,7
chr10	82362294	.	C	CAAAA	5691.38	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=0.262;DP=582;FS=7.124;HRun=19;HaplotypeScore=140.8884;InbreedingCoeff=0.7066;MQ=63.90;MQ0=10;MQRankSum=-2.302;QD=13.05;ReadPosRankSum=-3.482;VQSLOD=-0.4880;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:38:28.21:0,28,249	1/1:6,3:12:11:190,11,0	0/1:66,0:16:3.81:4,0,9	0/0:53,0:13:5.76:0,6,34	1/1:23,5:29:21.40:432,21,0	1/1:19,0:19:44.17:520,44,0	0/0:9,0:10:11.47:0,11,89	0/0:15,0:21:11.85:0,12,102	1/1:17,0:17:30.04:399,30,0	1/1:20,0:20:29.18:312,29,0	1/1:6,0:13:23.55:234,24,0	1/1:13,0:13:16.30:254,16,0	1/1:10,0:10:16.78:177,17,0	1/1:17,0:17:27.87:372,28,0	1/1:18,0:18:25.79:343,26,0	1/1:8,0:12:5.79:110,6,0	1/1:17,0:16:35.85:376,36,0	1/1:5,0:13:2.33:62,2,0	0/0:12,0:16:16.11:0,16,112	0/0:5,0:6:2.74:0,3,26	1/1:21,0:21:19.69:193,20,0	1/1:11,0:22:30.55:321,31,0	1/1:13,5:21:15.31:220,15,0	1/1:17,0:17:19.83:261,20,0	1/1:23,0:23:49.04:569,49,0	1/1:16,0:16:2.32:253,2,0	0/1:20,0:27:2.35:2,0,122	1/1:7,0:7:8.96:87,9,0
chr10	82362702	.	A	AG	14403.48	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-14.819;DP=637;FS=7.869;HRun=4;HaplotypeScore=55.2696;InbreedingCoeff=0.9950;MQ=82.67;MQ0=0;MQRankSum=-4.085;QD=35.22;ReadPosRankSum=5.587;VQSLOD=4.7113;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,1198	1/1:1,13:14:33.11:451,33,0	0/0:23,0:23:63.08:0,63,681	0/0:26,0:26:63.15:0,63,688	1/1:1,25:26:69.16:921,69,0	1/1:3,23:26:66.22:903,66,0	0/0:24,0:24:69.14:0,69,744	0/0:23,0:23:57.15:0,57,634	1/1:3,18:21:54.18:738,54,0	1/1:2,27:29:72.23:965,72,0	1/1:0,21:21:57.19:778,57,0	1/1:1,14:15:39.13:533,39,0	1/1:0,18:18:51.17:697,51,0	1/1:3,27:30:81.27:1100,81,0	1/1:2,20:22:60.20:821,60,0	1/1:1,27:28:78.26:1067,78,0	1/1:0,25:25:69.23:944,69,0	1/1:0,9:9:24.08:328,24,0	0/0:16,0:16:45.13:0,45,510	0/0:17,0:17:51.15:0,51,579	1/1:4,29:33:78.26:1067,78,0	1/1:2,22:24:66.22:900,66,0	1/1:3,13:15:36.12:491,36,0	1/1:3,25:28:63.12:838,63,0	1/1:0,24:24:63.21:862,63,0	0/0:25,0:25:72.19:0,72,803	0/0:31,0:31:90.26:0,90,1021	0/0:4,0:4:12.03:0,12,136
chr10	82362992	.	G	GT	20234.69	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-10.587;DP=755;FS=8.602;HRun=3;HaplotypeScore=78.2446;InbreedingCoeff=0.9822;MQ=79.22;MQ0=0;MQRankSum=-2.183;QD=38.25;ReadPosRankSum=5.956;VQSLOD=4.4381;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:99:0,144,1727	1/1:1,15:16:42.14:586,42,0	0/0:12,0:13:23.38:0,23,301	0/0:28,0:28:53.29:0,53,689	1/1:1,28:29:78.22:1070,78,0	1/1:1,28:29:81.27:1134,81,0	0/0:34,0:34:99:0,102,1211	0/0:39,0:39:99:0,108,1277	1/1:3,34:37:99:1428,102,0	1/1:2,23:25:69.20:946,69,0	1/1:3,14:17:39.13:538,39,0	1/1:0,25:25:72.24:1008,72,0	1/1:2,28:30:78.26:1092,78,0	1/1:0,19:19:54.18:756,54,0	1/1:0,33:33:90.30:1261,90,0	1/1:3,22:25:60.20:840,60,0	1/1:0,29:29:78.26:1092,78,0	1/1:0,16:16:45.15:626,45,0	0/0:22,0:22:63.19:0,63,756	0/0:16,0:16:48.13:0,48,565	1/1:0,45:45:99:1765,126,0	1/1:1,37:38:99:1470,105,0	1/1:1,19:21:57.19:798,57,0	1/1:1,27:28:78.26:1092,78,0	1/1:0,36:36:99:1512,108,0	1/1:2,27:29:81.27:1135,81,0	0/0:25,0:25:72.20:0,72,851	1/1:0,2:2:6.02:84,6,0
chr10	82363121	.	T	TA	21331.55	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-14.241;DP=751;FS=6.161;HRun=1;HaplotypeScore=67.7971;InbreedingCoeff=0.9998;MQ=78.98;MQ0=0;MQRankSum=-3.329;QD=39.80;ReadPosRankSum=4.817;VQSLOD=5.3838;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,1633	1/1:0,14:14:42.14:629,42,0	0/0:26,0:26:72.23:0,72,928	0/0:11,0:11:30.01:0,30,338	1/1:1,33:34:90.30:1348,90,0	1/1:0,22:22:57.19:854,57,0	0/0:13,0:13:36.10:0,36,453	0/0:32,0:32:93.29:0,93,1181	1/1:0,34:34:90.30:1348,90,0	1/1:4,29:33:93.29:1337,93,0	1/1:0,30:30:81.19:1186,81,0	1/1:2,26:28:78.26:1169,78,0	1/1:2,29:31:78.26:1169,78,0	1/1:1,16:17:48.16:718,48,0	1/1:1,37:38:99:1484,99,0	1/1:1,32:33:81.27:1214,81,0	1/1:0,26:26:72.24:1079,72,0	1/1:1,31:32:90.30:1349,90,0	0/0:30,0:30:81.22:0,81,1032	0/0:30,0:30:87.28:0,87,1129	1/1:1,17:18:39.13:585,39,0	1/1:2,34:36:93.32:1394,93,0	1/1:1,19:20:54.18:809,54,0	1/1:0,18:18:51.17:764,51,0	1/1:0,29:29:72.24:1079,72,0	1/1:3,30:33:93.28:1368,93,0	0/0:31,0:31:93.26:0,93,1163	1/1:0,10:10:30.10:449,30,0
chr10	82364619	.	ATTATCCC	A	18581.04	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=16.410;DP=600;FS=4.022;HRun=0;HaplotypeScore=157.6690;InbreedingCoeff=0.9656;MQ=63.47;MQ0=0;MQRankSum=-18.496;QD=52.49;ReadPosRankSum=7.695;VQSLOD=4.1791;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,3551	1/1:3,14:17:36.12:948,36,0	0/0:39,0:39:99:0,108,3865	0/0:22,0:22:60.17:0,60,2246	1/1:1,17:18:27.09:710,27,0	1/1:4,19:23:45.15:1185,45,0	0/0:21,0:21:63.22:0,63,2450	0/0:28,0:28:75.25:0,75,2827	1/1:0,15:15:36.12:948,36,0	1/1:0,18:18:54.19:1423,54,0	1/1:0,15:15:15.05:395,15,0	1/1:1,26:27:63.22:1659,63,0	1/1:0,23:23:63.08:1594,63,0	1/1:2,23:25:53.93:1422,54,0	1/1:3,36:39:84.29:2212,84,0	1/1:2,25:27:66.23:1739,66,0	1/1:2,14:16:30.10:790,30,0	1/1:0,11:11:27.09:712,27,0	0/0:18,0:18:51.18:0,51,1959	0/0:17,0:17:51.18:0,51,2012	1/1:3,10:13:2.99:79,3,0	1/1:2,12:14:27.09:711,27,0	1/1:4,15:19:18.06:474,18,0	1/1:1,10:11:12:316,12,0	1/1:2,21:23:48.16:1264,48,0	0/0:23,0:23:63.22:0,63,2458	0/0:27,0:27:81.23:0,81,3090	0/0:17,0:17:48.10:0,48,1708
chr10	82365820	.	G	GC	17603.02	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=16.327;DP=650;FS=23.903;HRun=0;HaplotypeScore=94.7185;InbreedingCoeff=0.9967;MQ=83.42;MQ0=0;MQRankSum=-4.507;QD=42.62;ReadPosRankSum=4.565;VQSLOD=2.8817;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1592	1/1:0,10:10:24.08:383,24,0	0/0:21,0:21:62.81:0,63,782	0/0:21,0:21:51.16:0,51,672	1/1:1,22:23:66.22:1043,66,0	1/1:0,26:26:66.23:1055,66,0	0/0:33,0:33:96.32:0,96,1341	0/0:28,0:28:84.26:0,84,1143	1/1:1,25:26:63.21:1007,63,0	1/1:1,19:20:57.19:909,57,0	1/1:1,29:30:78.27:1246,78,0	1/1:0,24:24:60.20:958,60,0	1/1:2,22:24:57.19:899,57,0	1/1:2,20:22:60.20:959,60,0	1/1:0,26:26:75.26:1195,75,0	1/1:0,26:26:72.25:1151,72,0	1/1:0,20:20:54.18:863,54,0	1/1:1,26:27:75.26:1198,75,0	0/0:14,0:14:40.38:0,40,548	0/0:27,0:27:72.24:0,72,1005	1/1:0,36:36:99:1582,99,0	1/1:1,8:9:21.07:336,21,0	1/1:0,22:22:63.21:996,63,0	1/1:0,26:26:69.24:1103,69,0	1/1:1,15:16:45.15:719,45,0	0/0:26,0:26:78.26:0,78,1091	0/0:23,0:23:69.21:0,69,947	0/0:5,0:5:15.05:0,15,210
chr10	82366538	.	AAGAT	A	17976.24	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=9.942;DP=712;FS=5.285;HRun=0;HaplotypeScore=181.9480;InbreedingCoeff=0.9922;MQ=60.23;MQ0=3;MQRankSum=-2.852;QD=37.30;ReadPosRankSum=4.486;VQSLOD=4.3038;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:71.64:0,72,1757	1/1:4,10:14:30.10:497,30,0	0/0:26,0:16:37.41:0,37,688	0/0:25,0:19:19.14:0,19,234	1/1:9,18:27:51.12:858,51,0	1/1:6,14:20:48.16:829,48,0	0/0:15,0:15:27.09:0,27,673	0/0:47,0:46:99:0,102,2451	1/1:10,15:25:61.73:997,62,0	1/1:16,23:38:87.30:1466,87,0	1/1:14,15:29:60.02:952,60,0	1/1:12,15:27:12.44:982,12,0	1/1:9,17:26:66.14:1098,66,0	1/1:4,12:16:33.08:538,33,0	1/1:5,20:24:60.21:1025,60,0	1/1:8,10:18:39.13:663,39,0	1/1:7,12:19:17.82:598,18,0	1/1:5,8:13:27.04:465,27,0	0/0:14,0:14:30.10:0,30,770	0/0:35,0:35:81.22:0,81,1923	1/1:10,14:24:50.79:830,51,0	1/1:10,18:28:72.23:1176,72,0	1/1:12,15:27:54.14:867,54,0	1/1:9,11:20:33.01:570,33,0	1/1:9,19:28:69.24:1160,69,0	1/1:10,28:38:79.47:1551,79,0	0/0:36,0:35:93.32:0,93,2339	1/1:3,16:19:51.16:854,51,0
chr10	82366550	.	TA	T	2327.41	PASS	AB=0.990;AC=26;AF=0.464;AN=56;BaseQRankSum=11.486;DP=687;FS=3.493;HRun=1;HaplotypeScore=220.7243;InbreedingCoeff=0.0442;MQ=59.08;MQ0=3;MQRankSum=-0.849;QD=5.04;ReadPosRankSum=7.583;VQSLOD=0.3411;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:77.49:0,77,1236	0/1:11,0:11:20.78:95,0,21	0/0:31,0:23:50.47:0,50,900	0/0:28,0:22:29.75:0,30,499	0/1:27,0:27:61.46:147,0,61	1/1:16,1:17:26.33:91,26,0	0/0:14,0:14:32.97:0,33,521	0/0:45,0:44:99:0,126,1984	0/1:23,1:24:4.11:110,0,4	0/1:37,0:37:99:122,0,107	0/1:28,2:30:55.58:180,0,56	0/1:25,1:26:99:192,0,106	1/1:24,1:25:41.80:212,42,0	1/1:15,0:15:18.49:60,18,0	1/1:24,0:23:19.51:106,20,0	0/1:15,0:15:55.57:74,0,56	0/1:15,0:15:30.33:30,0,39	0/1:11,0:11:1.92:27,0,2	0/0:12,0:12:36.02:0,36,561	0/0:32,0:32:81.22:0,81,1244	0/1:25,0:25:71.57:72,0,123	1/1:27,0:27:48.21:348,48,0	0/1:24,0:24:99:176,0,107	0/1:24,0:24:32.53:33,0,146	0/1:26,0:26:73.16:185,0,73	0/1:40,0:40:99:162,0,122	0/0:34,0:33:93.32:0,93,1486	1/1:18,0:18:27.87:93,28,0
chr10	82366593	.	A	AGATG	11195.80	PASS	AB=0.859;AC=37;AF=0.661;AN=56;BaseQRankSum=-1.177;DP=642;FS=2.498;HRun=0;HaplotypeScore=247.0332;InbreedingCoeff=0.5981;MQ=46.99;MQ0=4;MQRankSum=0.855;QD=23.62;ReadPosRankSum=1.068;VQSLOD=4.7304;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:44.56:45,0,88	1/1:9,0:9:17.97:213,18,0	0/0:18,0:16:19.92:0,20,204	0/0:18,0:13:12.02:0,12,117	1/1:23,0:23:15:147,15,0	1/1:12,10:22:50.87:851,51,0	0/0:6,0:6:8.99:0,9,76	0/0:34,0:31:57.24:0,57,515	1/1:14,15:29:74.83:1257,75,0	1/1:26,2:28:59.99:875,60,0	1/1:24,0:25:28.84:286,29,0	1/1:15,7:22:6.09:754,6,0	1/1:29,1:30:65.12:842,65,0	1/1:11,0:11:19.75:260,20,0	1/1:25,0:25:46.34:513,46,0	0/1:6,11:17:0.25:837,0,0	1/1:18,0:17:16.61:244,17,0	1/1:8,7:15:35.56:644,36,0	0/1:11,0:11:86.16:86,0,90	0/0:42,0:42:37.64:0,38,319	1/1:13,13:25:44.70:722,45,0	1/1:24,0:24:42.75:514,43,0	1/1:18,12:30:51.01:894,51,0	0/1:11,9:20:22.38:444,0,22	1/1:9,11:20:35.98:747,36,0	0/1:40,0:40:21.38:21,0,432	0/0:32,0:31:15.23:0,15,332	0/0:18,0:18:33.61:0,34,254
chr10	82366601	.	G	GGATGGATA	11421.26	PASS	AB=0.968;AC=39;AF=0.696;AN=56;BaseQRankSum=2.339;DP=624;FS=8.446;HRun=0;HaplotypeScore=278.2684;InbreedingCoeff=-0.0991;MQ=43.37;MQ0=4;MQRankSum=-1.053;QD=19.10;ReadPosRankSum=4.176;VQSLOD=2.5531;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:86.91:109,0,87	1/1:5,3:8:18:426,18,0	0/0:13,0:10:22.87:0,23,245	0/0:13,0:8:15:0,15,139	1/1:16,5:21:14.90:195,15,0	1/1:21,0:21:27.85:356,28,0	0/1:6,0:6:13.01:13,0,64	0/1:35,0:32:99:170,0,393	1/1:30,0:30:51.94:544,52,0	1/1:21,4:25:62.99:1390,63,0	1/1:18,7:25:34.54:470,35,0	0/1:26,0:26:96.11:357,0,96	1/1:22,7:29:68.33:1490,68,0	1/1:7,4:11:20.99:506,21,0	1/1:16,7:23:50.72:1057,51,0	0/1:20,0:20:81.72:277,0,82	1/1:12,2:14:27.13:476,27,0	1/1:14,0:14:38.94:346,39,0	0/1:3,0:11:79.82:292,0,80	0/1:40,0:40:99:149,0,213	1/1:25,0:24:44.25:382,44,0	1/1:16,9:25:45.81:970,46,0	0/1:29,0:29:21.08:376,0,21	0/1:21,0:21:99:179,0,108	0/1:24,0:24:78.96:255,0,79	0/1:37,0:37:99:347,0,229	0/1:31,0:30:99:190,0,173	0/1:18,0:18:99:100,0,141
chr10	82366675	.	AGAT	A	3460.88	PASS	AB=0.986;AC=36;AF=0.643;AN=56;BaseQRankSum=10.731;DP=535;FS=27.431;HRun=0;HaplotypeScore=230.6590;InbreedingCoeff=0.1747;MQ=43.79;MQ0=7;MQRankSum=-8.113;QD=8.05;ReadPosRankSum=-0.115;VQSLOD=1.7746;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:37:28.56:29,0,158	1/1:4,0:4:9.01:95,9,0	0/0:16,0:5:6.02:0,6,84	0/1:17,0:7:22.49:22,0,170	1/1:17,0:16:2.96:20,3,0	1/1:12,0:12:12:105,12,0	0/0:13,0:12:27.09:0,27,429	0/1:50,0:43:99:322,0,1040	1/1:21,0:21:5.11:446,5,0	1/1:15,0:12:26.60:212,27,0	1/1:11,1:12:5.96:48,6,0	0/1:20,0:20:2.27:295,0,2	0/1:21,0:20:6.52:186,0,7	1/1:16,0:16:33.04:377,33,0	1/1:16,0:16:12.54:284,13,0	1/1:23,0:23:20.36:510,20,0	0/1:18,0:17:16.97:107,0,17	0/1:12,0:12:54.67:76,0,55	0/0:16,0:13:29.44:0,29,490	0/1:26,3:29:12.84:13,0,482	1/1:6,2:7:0.88:3,1,0	1/1:17,0:17:5.87:55,6,0	0/1:12,0:11:18.61:19,0,19	1/1:7,1:8:5.83:53,6,0	1/1:23,0:23:6.93:185,7,0	0/0:22,1:23:47.88:0,48,723	0/0:37,0:37:99:0,99,1945	0/1:21,1:22:1.16:1,0,660
chr10	82366676	.	GAT	G	381.06	PASS	AB=0.856;AC=17;AF=0.304;AN=56;BaseQRankSum=9.895;DP=535;FS=16.668;HRun=0;HaplotypeScore=237.1421;InbreedingCoeff=0.3222;MQ=43.77;MQ0=7;MQRankSum=-8.908;QD=2.18;ReadPosRankSum=-0.083;VQSLOD=0.6230;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:55.50:0,56,740	1/1:4,0:4:4.17:11,4,0	0/0:15,0:4:12.02:0,12,184	0/0:17,0:7:16.11:0,16,246	0/0:17,0:16:1.55:0,2,4	1/1:11,1:12:4.98:11,5,0	0/0:13,0:12:27.09:0,27,548	0/0:50,0:43:54.23:0,54,1680	0/1:14,7:21:62.46:151,0,62	1/1:14,1:12:6.72:31,7,0	0/0:12,0:12:1.96:0,2,15	0/1:19,1:20:48.10:52,0,48	0/0:22,0:21:10.84:0,11,120	1/1:12,4:16:6.33:98,6,0	0/1:13,3:16:24.86:66,0,25	0/1:20,3:23:41.69:79,0,42	0/0:18,0:17:12.69:0,13,93	0/0:12,0:12:6.23:0,6,183	0/0:16,0:13:33.05:0,33,590	0/0:29,0:29:25.16:0,25,601	0/0:6,2:7:2.91:0,3,21	1/1:12,5:17:5.42:27,5,0	0/0:9,3:11:1.51:0,2,37	1/1:7,1:8:2.44:5,2,0	0/1:19,4:23:6.65:7,0,48	0/0:23,0:23:57.19:0,57,1012	0/0:37,0:37:99:0,102,2026	0/0:22,0:22:43.08:0,43,888
chr10	82366678	.	T	TG	4970.62	PASS	AB=0.874;AC=36;AF=0.643;AN=56;BaseQRankSum=11.052;DP=558;FS=25.230;HRun=1;HaplotypeScore=231.8522;InbreedingCoeff=0.5471;MQ=43.45;MQ0=7;MQRankSum=-9.490;QD=13.58;ReadPosRankSum=-2.113;VQSLOD=1.6215;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,1:36:12.23:0,12,428	1/1:5,2:7:8.86:113,9,0	0/0:13,0:3:6.02:0,6,78	0/1:17,0:7:2.37:2,0,167	1/1:12,9:20:2.64:19,3,0	1/1:7,7:14:12.03:179,12,0	0/0:11,0:13:27.09:0,27,350	0/1:44,0:45:99:222,0,968	1/1:11,10:21:41.15:450,41,0	1/1:10,7:14:36.20:369,36,0	1/1:4,7:13:8.88:110,9,0	1/1:2,18:20:4.45:464,4,0	1/1:13,11:23:34.45:431,34,0	1/1:5,10:16:32.39:370,32,0	1/1:5,12:17:32.79:442,33,0	1/1:6,19:25:42.12:882,42,0	0/1:14,3:20:13.39:179,0,13	0/1:9,2:11:70.07:98,0,70	0/0:15,0:13:5.18:0,5,343	0/0:23,0:31:13.85:0,14,355	1/1:5,3:7:2.95:20,3,0	1/1:5,11:16:8.67:109,9,0	1/1:8,5:12:2.85:45,3,0	1/1:4,3:8:6.02:89,6,0	1/1:7,16:23:26.96:377,27,0	0/0:19,0:24:41.31:0,41,478	0/0:37,0:37:99:0,105,1328	0/0:13,0:21:31.27:0,31,376
chr10	82366729	.	GGAGA	G	72.68	PASS	AB=0.979;AC=13;AF=0.232;AN=56;BaseQRankSum=8.474;DP=602;FS=1.676;HRun=0;HaplotypeScore=258.6688;InbreedingCoeff=-0.1558;MQ=44.11;MQ0=8;MQRankSum=-8.733;QD=0.33;ReadPosRankSum=-5.209;VQSLOD=1.7810;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,1:32:8.65:9,0,1073	0/0:9,0:9:8.29:0,8,164	0/0:28,0:15:42.48:0,42,889	0/0:13,0:8:20.99:0,21,500	0/0:22,0:21:12.04:0,12,225	0/1:24,1:25:53.80:54,0,416	0/0:14,0:14:25.49:0,25,747	0/0:57,0:54:99:0,144,3504	0/1:21,0:21:35:35,0,201	0/0:38,0:37:71.77:0,72,1197	0/1:22,0:20:8.73:9,0,210	0/1:13,0:13:3.22:3,0,150	0/0:24,0:21:3.95:0,4,235	0/0:8,0:8:14.27:0,14,187	0/1:11,0:10:11.91:12,0,32	0/1:13,0:13:0.86:1,0,328	0/1:13,1:14:5.48:5,0,157	0/0:10,0:9:6.23:0,6,164	0/0:14,0:14:36.12:0,36,922	0/0:33,0:32:26.90:0,27,693	1/1:10,0:10:1.58:4,2,0	0/1:28,0:28:1.99:2,0,157	0/0:25,0:24:3.92:0,4,59	0/1:13,0:14:6.83:7,0,50	0/0:25,0:25:8.90:0,9,198	0/0:24,0:24:47.83:0,48,1375	0/0:35,0:35:39.29:0,39,1924	0/1:16,2:16:59.65:60,0,627
chr10	82366748	.	GAGAT	G	818.51	PASS	AB=0.952;AC=27;AF=0.519;AN=52;BaseQRankSum=5.265;DP=562;FS=1.681;HRun=0;HaplotypeScore=235.7132;InbreedingCoeff=0.4891;MQ=43.18;MQ0=14;MQRankSum=-3.895;QD=3.09;ReadPosRankSum=1.004;VQSLOD=2.0475;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:31.26:0,31,660	0/0:10,0:10:3.88:0,4,72	./.	./.	0/0:21,0:21:0:0,0,0	1/1:25,0:25:14.13:163,14,0	0/0:14,0:14:15.05:0,15,322	0/0:53,0:52:29.93:0,30,358	1/1:16,2:18:17.50:196,17,0	0/0:43,0:41:43.98:0,44,1007	1/1:21,0:21:2.99:24,3,0	1/1:10,2:12:9.51:147,10,0	0/1:22,0:19:0.65:1,0,199	1/1:7,1:8:6.02:86,6,0	1/1:7,0:7:5.95:64,6,0	1/1:12,0:12:0.55:21,1,0	0/0:12,0:12:3.01:0,3,71	1/1:9,0:9:9.53:80,10,0	0/0:12,0:11:11.98:0,12,137	0/0:25,0:27:11.52:0,12,122	0/1:11,0:10:0:0,0,0	1/1:25,0:25:4.96:20,5,0	1/1:22,2:25:1.24:3,1,0	1/1:13,0:13:2.64:12,3,0	0/1:21,3:24:11.80:125,0,12	0/1:16,0:17:38.66:39,0,61	0/0:28,0:32:20.59:0,21,366	0/1:12,0:12:0:0,0,0
chr10	82366768	.	TA	T	394.09	PASS	AB=0.801;AC=3;AF=0.054;AN=56;BaseQRankSum=3.860;DP=543;FS=13.103;HRun=1;HaplotypeScore=215.6290;InbreedingCoeff=-0.0580;MQ=38.95;MQ0=14;MQRankSum=-4.900;QD=10.65;ReadPosRankSum=0.155;VQSLOD=0.1128;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:33.02:0,33,690	0/0:11,0:11:16.31:0,16,117	0/0:14,0:2:5.98:0,6,56	0/0:7,0:1:3.01:0,3,44	0/0:23,0:23:10.62:0,11,53	0/0:27,0:27:38.90:0,39,212	0/0:13,0:13:36.12:0,36,553	0/0:47,0:41:99:0,117,1694	0/0:19,0:19:27.48:0,27,168	0/0:42,0:41:82.01:0,82,1203	0/0:25,0:22:19.35:0,19,105	0/0:15,0:14:0.36:0,0,74	0/0:18,0:16:31.26:0,31,316	0/0:10,0:10:20.30:0,20,145	0/0:8,0:7:7.49:0,7,67	0/0:16,0:16:34.41:0,34,247	0/1:11,0:10:1.92:2,0,87	0/0:9,0:9:6.44:0,6,95	0/0:9,0:8:24.08:0,24,353	0/0:30,0:29:53.62:0,54,781	0/0:6,0:6:2.22:0,2,7	0/0:27,0:27:6.47:0,6,55	0/0:30,0:30:8.17:0,8,47	0/0:9,1:10:5.21:0,5,36	0/0:31,0:31:21.70:0,22,95	0/1:8,9:17:90.37:361,0,90	0/0:31,0:31:81.15:0,81,1091	0/1:6,3:9:44.85:120,0,45
chr10	82366846	.	TG	T	8934.85	PASS	AB=0.542;AC=34;AF=0.607;AN=56;BaseQRankSum=11.574;DP=596;FS=2.948;HRun=2;HaplotypeScore=129.9126;InbreedingCoeff=0.8768;MQ=52.26;MQ0=3;MQRankSum=-1.416;QD=27.24;ReadPosRankSum=7.155;VQSLOD=4.2403;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:51.28:0,51,756	1/1:0,10:10:30.10:389,30,0	0/0:29,0:15:39.55:0,40,517	0/0:25,0:18:54.17:0,54,787	1/1:1,20:21:27.09:351,27,0	1/1:2,18:20:48.14:608,48,0	0/0:17,0:17:48.16:0,48,716	0/0:49,0:49:99:0,141,2104	1/1:1,19:20:48.14:607,48,0	1/1:0,36:35:99:1285,99,0	1/1:1,22:23:42.14:545,42,0	1/1:1,12:12:33.11:428,33,0	1/1:0,15:15:39.13:506,39,0	1/1:0,12:12:36.12:467,36,0	1/1:0,15:15:30.10:389,30,0	1/1:0,19:19:51.17:661,51,0	0/1:3,14:17:26.74:281,0,27	0/1:2,13:15:1.07:464,0,1	0/0:13,0:12:36.12:0,36,538	0/0:45,0:45:99:0,135,1998	1/1:0,12:12:15.05:195,15,0	1/1:2,21:23:38.80:506,39,0	1/1:3,19:22:29.39:388,29,0	1/1:0,14:14:26.60:350,27,0	1/1:1,20:21:14.07:514,14,0	0/0:27,0:27:78.26:0,78,1166	0/0:26,0:25:75.25:0,75,1119	0/0:14,0:14:38.77:0,39,527
chr10	82366900	.	A	AT	11047.93	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-1.176;DP=527;FS=2.132;HRun=6;HaplotypeScore=81.4149;InbreedingCoeff=0.9953;MQ=70.63;MQ0=0;MQRankSum=-5.970;QD=31.03;ReadPosRankSum=0.590;VQSLOD=5.2584;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.16:0,72,734	1/1:2,6:8:18.06:226,18,0	0/0:16,0:16:26.88:0,27,272	0/0:10,0:10:20.95:0,21,191	1/1:3,24:27:72.22:894,72,0	1/1:5,28:33:84.18:1012,84,0	0/0:21,0:21:60.10:0,60,594	0/0:31,0:31:81.17:0,81,821	1/1:3,9:12:30.03:357,30,0	1/1:8,20:27:66.21:820,66,0	1/1:7,26:33:84.24:1020,84,0	1/1:5,8:12:33.09:402,33,0	1/1:2,15:15:36.11:450,36,0	1/1:1,10:11:30.10:377,30,0	1/1:3,13:16:42.07:498,42,0	1/1:3,17:20:48.15:603,48,0	1/1:3,9:12:30.10:373,30,0	1/1:3,14:17:36.03:432,36,0	0/0:13,0:13:36.08:0,36,367	0/0:31,0:31:72.16:0,72,734	1/1:4,5:9:18.06:226,18,0	1/1:6,15:21:54.08:643,54,0	1/1:0,20:20:54.17:674,54,0	1/1:3,6:9:20.93:246,21,0	1/1:0,13:13:39.12:490,39,0	1/1:2,17:19:51.14:624,51,0	0/0:25,0:25:69.12:0,69,690	1/1:0,18:18:54.17:679,54,0
chr10	82368549	.	GA	G	2273.71	PASS	AB=0.979;AC=37;AF=0.685;AN=54;BaseQRankSum=-7.046;DP=468;FS=2.653;HRun=13;HaplotypeScore=161.0100;InbreedingCoeff=-0.0027;MQ=52.33;MQ0=20;MQRankSum=1.502;QD=5.60;ReadPosRankSum=8.989;VQSLOD=0.1047;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:14:6.31:20,6,0	1/1:5,0:4:8.93:64,9,0	0/0:33,0:9:0.91:0,1,59	0/1:48,1:18:2.53:3,0,65	0/1:20,0:20:9.26:168,0,9	1/1:22,2:15:25.75:219,26,0	./.	1/1:14,0:14:11.31:54,11,0	0/1:19,1:16:7.79:134,0,8	1/1:24,0:20:13.85:235,14,0	0/1:16,0:14:39.81:90,0,40	0/1:15,0:9:1.61:82,0,2	0/1:19,0:14:11.87:119,0,12	0/1:19,0:11:4.60:86,0,5	0/1:24,0:20:26.93:116,0,27	0/1:26,1:21:16.70:196,0,17	1/1:18,0:18:14.69:148,15,0	1/1:11,0:10:17.76:119,18,0	1/1:10,0:10:8.41:42,8,0	0/0:13,0:13:0:0,0,0	1/1:9,0:8:5.83:43,6,0	0/1:11,0:10:6.25:83,0,6	1/1:11,0:10:18.66:126,19,0	1/1:12,0:10:3.67:71,4,0	1/1:17,0:15:16.53:154,17,0	0/0:14,0:10:16.59:0,17,73	1/1:6,1:6:7.28:43,7,0	0/1:6,1:6:6.80:7,0,17
chr10	82368561	.	AAC	A	5140.96	PASS	AB=0.887;AC=50;AF=0.893;AN=56;BaseQRankSum=0.301;DP=498;FS=0.000;HRun=0;HaplotypeScore=123.8804;InbreedingCoeff=-0.0881;MQ=46.04;MQ0=65;MQRankSum=-0.150;QD=10.32;ReadPosRankSum=-0.365;VQSLOD=4.3170;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,5:18:20.49:135,20,0	1/1:2,3:4:9:82,9,0	0/1:36,0:10:29.68:30,0,121	0/1:61,0:17:6.78:7,0,83	1/1:11,11:21:37.55:390,38,0	1/1:11,12:14:31.37:372,31,0	1/1:1,0:1:2.96:19,3,0	1/1:2,6:7:17.09:178,17,0	1/1:14,9:16:7.42:293,7,0	1/1:11,17:18:40.50:451,41,0	0/1:9,7:14:20.75:154,0,21	1/1:11,7:9:11.22:145,11,0	1/1:10,8:12:14.46:221,14,0	1/1:11,8:10:3.86:158,4,0	1/1:9,11:15:23.61:291,24,0	1/1:14,13:20:34.39:416,34,0	1/1:10,6:14:31.87:240,32,0	1/1:12,6:11:25.93:256,26,0	1/1:6,5:8:20.75:187,21,0	1/1:13,0:11:14.68:87,15,0	1/1:4,3:4:5.99:55,6,0	0/1:4,6:9:8.40:136,0,8	1/1:4,6:8:19.26:173,19,0	1/1:4,7:7:12:113,12,0	1/1:1,14:13:27.95:298,28,0	0/1:23,0:12:15.43:71,0,15	1/1:7,0:6:14.84:144,15,0	0/1:9,0:4:5.13:40,0,5
chr10	82368562	.	ACC	A	4748.22	PASS	AB=0.950;AC=54;AF=0.964;AN=56;BaseQRankSum=1.278;DP=498;FS=16.181;HRun=2;HaplotypeScore=124.1177;InbreedingCoeff=0.0089;MQ=42.79;MQ0=71;MQRankSum=-0.775;QD=9.53;ReadPosRankSum=2.390;VQSLOD=0.5449;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,4:17:22.13:228,22,0	1/1:5,0:4:8.63:45,9,0	0/1:33,2:9:71.14:71,0,96	0/1:59,2:16:8.70:9,0,69	1/1:19,2:20:53.50:391,53,0	1/1:23,0:14:40.31:252,40,0	1/1:1,0:1:3.01:46,3,0	1/1:8,0:7:4.68:125,5,0	1/1:22,1:16:27.04:266,27,0	1/1:27,1:18:43.73:273,44,0	1/1:15,1:14:31.50:199,31,0	1/1:16,1:8:18.63:120,19,0	1/1:18,0:12:30.90:174,31,0	1/1:19,0:10:22.84:124,23,0	1/1:20,0:15:41.03:293,41,0	1/1:27,0:20:54.65:354,55,0	1/1:13,1:12:28.49:177,28,0	1/1:17,1:11:28.69:213,29,0	1/1:9,3:8:20.73:219,21,0	1/1:2,11:11:15.05:189,15,0	1/1:5,2:4:5.75:31,6,0	1/1:10,0:9:11.68:144,12,0	1/1:10,0:8:20.37:120,20,0	1/1:11,0:7:11.52:64,12,0	1/1:15,0:13:29.24:184,29,0	1/1:19,4:12:29.68:291,30,0	1/1:7,1:6:14.68:119,15,0	1/1:12,0:4:6.65:26,7,0
chr10	82368563	.	CCAAAA	C	725.29	PASS	AB=0.980;AC=23;AF=0.411;AN=56;BaseQRankSum=-9.010;DP=508;FS=4.478;HRun=0;HaplotypeScore=151.8708;InbreedingCoeff=-0.3006;MQ=42.29;MQ0=78;MQRankSum=3.954;QD=2.06;ReadPosRankSum=-10.195;VQSLOD=0.0264;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:13,10:18:2.58:180,0,3	0/0:6,0:5:9.61:0,10,36	0/1:34,0:9:19.06:19,0,82	0/0:63,0:16:4.04:0,4,126	0/1:21,0:20:53.50:54,0,133	0/1:20,0:14:36.74:37,0,75	1/1:3,0:1:2.90:16,3,0	0/1:9,0:7:38.80:86,0,39	0/1:23,0:17:53.75:54,0,222	0/1:28,0:18:19.11:19,0,119	0/0:16,0:13:4.78:0,5,270	0/0:16,0:8:4.73:0,5,95	0/1:15,0:12:12.62:13,0,177	0/1:18,0:10:10.39:10,0,113	0/1:19,0:15:23.91:24,0,193	0/0:23,0:19:16.95:0,17,248	0/1:14,0:12:14.51:15,0,62	0/1:18,0:11:19.32:19,0,35	1/1:12,0:8:16.17:85,16,0	1/1:13,0:11:13.39:64,13,0	0/0:7,0:4:4.44:0,4,14	0/0:10,0:9:4.86:0,5,113	0/0:10,0:8:2.74:0,3,59	0/1:10,0:7:4.26:4,0,17	0/1:15,0:13:6.43:6,0,88	0/1:22,1:12:99:139,0,181	0/1:6,0:4:12.26:20,0,12	0/1:15,0:4:7.17:19,0,7
chr10	82368568	.	A	AC	1543.84	PASS	AB=0.757;AC=22;AF=0.393;AN=56;BaseQRankSum=7.842;DP=547;FS=4.380;HRun=0;HaplotypeScore=136.1893;InbreedingCoeff=-0.1111;MQ=39.32;MQ0=95;MQRankSum=-4.412;QD=4.87;ReadPosRankSum=2.918;VQSLOD=2.9006;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:19:12.89:0,13,109	0/1:4,3:5:13.85:48,0,14	0/0:33,0:7:15.67:0,16,101	0/0:69,1:17:24.16:0,24,150	0/1:14,8:20:80.94:125,0,81	0/1:15,9:13:32.45:151,0,32	0/0:3,0:1:3:0,3,25	0/0:11,0:8:22.93:0,23,162	0/1:19,5:16:92.74:100,0,93	0/1:15,10:14:9.67:189,0,10	0/1:13,5:14:72.51:73,0,107	0/1:12,7:9:36.72:37,0,56	0/1:14,4:11:23.73:92,0,24	0/1:15,4:9:14.42:75,0,14	0/1:12,8:15:89.66:95,0,90	0/1:16,10:19:61.89:169,0,62	0/1:13,5:14:42.78:71,0,43	0/1:19,4:15:58.87:87,0,59	0/0:13,0:8:20.44:0,20,152	0/0:14,0:11:14.87:0,15,104	1/1:6,2:4:5.93:40,6,0	0/1:5,5:9:33.44:101,0,33	1/1:5,5:8:5:97,5,0	1/1:7,4:7:11.66:69,12,0	1/1:9,6:11:17.22:97,17,0	0/0:29,0:16:21.66:0,22,140	0/0:9,0:6:14.89:0,15,107	0/0:23,0:7:13.65:0,14,82
chr10	82368572	.	A	AC	1134.49	PASS	AB=0.976;AC=21;AF=0.375;AN=56;BaseQRankSum=9.843;DP=577;FS=10.738;HRun=0;HaplotypeScore=129.3253;InbreedingCoeff=-0.1694;MQ=36.57;MQ0=116;MQRankSum=-3.364;QD=3.56;ReadPosRankSum=2.176;VQSLOD=3.0189;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:20:28.96:0,29,220	0/1:7,0:5:5.67:35,0,6	0/0:38,0:9:14.58:0,15,133	0/0:74,0:16:15.69:0,16,122	0/1:23,0:21:68.06:68,0,94	0/1:21,2:12:36.69:112,0,37	0/0:4,0:1:3:0,3,26	0/0:10,0:5:14.35:0,14,106	0/1:24,0:15:41.24:41,0,124	0/1:27,0:13:9.23:145,0,9	0/1:19,0:15:28.88:29,0,101	0/1:17,1:7:34.10:34,0,57	0/1:16,0:9:12.68:90,0,13	0/1:16,1:7:32.02:34,0,32	0/1:18,0:13:38.84:39,0,91	0/1:25,0:18:62.73:123,0,63	0/1:18,2:15:33.42:99,0,33	0/1:22,2:14:87.16:107,0,87	0/0:14,0:6:14.96:0,15,122	0/0:15,0:11:14.89:0,15,107	1/1:8,0:4:5.81:31,6,0	0/1:12,0:9:38.43:47,0,38	0/1:11,0:9:27.09:53,0,27	1/1:11,1:7:8.17:45,8,0	1/1:9,6:10:20.63:174,21,0	0/0:30,0:18:50.37:0,50,356	0/0:10,0:6:14.90:0,15,111	0/0:31,0:10:20.14:0,20,146
chr10	82368580	.	ACC	A	3758.35	PASS	AB=0.945;AC=49;AF=0.875;AN=56;BaseQRankSum=-2.999;DP=557;FS=10.132;HRun=2;HaplotypeScore=119.0893;InbreedingCoeff=0.1839;MQ=35.80;MQ0=117;MQRankSum=-1.094;QD=7.17;ReadPosRankSum=0.071;VQSLOD=-0.5273;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,7:18:35.66:359,36,0	1/1:6,0:5:11.46:80,11,0	0/0:33,0:9:22.19:0,22,138	0/1:65,2:15:3.81:4,0,50	1/1:20,2:20:41.99:322,42,0	1/1:22,1:12:8.87:111,9,0	1/1:4,0:1:3.01:41,3,0	0/1:9,2:6:2.30:175,0,2	0/1:21,0:13:26.87:176,0,27	1/1:27,0:14:19.92:90,20,0	1/1:16,1:14:23.38:198,23,0	1/1:19,0:7:17.10:121,17,0	1/1:15,0:9:0.03:47,0,0	1/1:16,1:7:16.70:100,17,0	1/1:17,1:11:17.58:153,18,0	1/1:24,0:18:23.75:235,24,0	1/1:20,1:16:28.82:204,29,0	0/1:22,2:14:2.78:165,0,3	1/1:14,3:5:15.05:200,15,0	1/1:10,4:10:15.05:192,15,0	1/1:8,0:3:3.63:10,4,0	1/1:10,0:8:4.70:71,5,0	0/1:11,0:9:2.72:61,0,3	1/1:12,0:6:7.41:20,7,0	1/1:14,0:10:13.25:98,13,0	1/1:31,2:18:24.24:296,24,0	1/1:8,1:5:14.52:139,15,0	1/1:31,0:10:0.69:89,1,0
chr10	82368590	.	A	AC	662.12	PASS	AB=0.997;AC=19;AF=0.339;AN=56;BaseQRankSum=9.042;DP=549;FS=4.191;HRun=0;HaplotypeScore=111.6652;InbreedingCoeff=-0.3564;MQ=35.23;MQ0=124;MQRankSum=-3.671;QD=2.09;ReadPosRankSum=-5.399;VQSLOD=0.4140;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:19:38.54:0,39,285	0/1:4,0:3:8.41:8,0,47	0/0:35,0:10:17.87:0,18,161	0/0:66,0:15:0.37:0,0,16	0/0:21,0:18:23.74:0,24,226	0/1:21,0:10:38.24:38,0,93	0/0:4,0:1:3:0,3,26	0/0:12,0:6:17.95:0,18,146	0/1:17,0:11:29.22:29,0,99	0/1:30,0:16:88.50:107,0,88	0/1:15,0:12:14.12:14,0,140	0/1:17,0:7:14.98:15,0,63	0/1:15,0:8:33.31:57,0,33	0/1:15,0:6:12.69:13,0,74	0/1:19,0:12:37.22:37,0,103	0/1:22,0:16:50.35:50,0,162	0/1:19,0:13:3.13:3,0,122	0/0:21,0:12:17.03:0,17,202	0/0:16,0:5:14.88:0,15,107	0/0:15,0:11:17.82:0,18,126	0/1:8,0:4:11.59:12,0,13	0/1:12,0:9:43.59:44,0,59	0/1:12,0:9:45.27:45,0,52	0/1:10,0:5:11.13:26,0,11	0/1:14,0:11:37.16:64,0,37	0/1:34,2:21:99:110,0,144	0/0:10,0:5:14.63:0,15,94	1/1:27,4:10:17.12:148,17,0
chr10	82369005	.	A	AAG	401.01	PASS	AC=10;AF=0.556;AN=18;BaseQRankSum=1.021;DP=183;FS=0.000;HRun=0;HaplotypeScore=20.2910;MQ=15.48;MQ0=113;MQRankSum=-2.980;QD=10.84;ReadPosRankSum=-0.776;VQSLOD=2.2965;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,7:5:5.93:103,6,0	./.	./.	0/0:0,11:6:0:0,0,0	./.	./.	./.	./.	1/1:0,6:4:12.03:183,12,0	0/0:0,11:5:0:0,0,0	./.	./.	./.	./.	./.	./.	./.	./.	0/0:10,0:8:21.07:0,21,302	./.	1/1:1,6:3:6.02:103,6,0	1/1:0,11:8:3.01:51,3,0	./.	1/1:0,6:2:3.01:51,3,0	0/0:7,1:2:5.95:0,6,42	./.	./.
chr10	82369603	.	GA	G	318.23	PASS	AC=4;AF=0.080;AN=50;BaseQRankSum=-3.802;DP=435;FS=2.424;HRun=10;HaplotypeScore=57.8264;InbreedingCoeff=0.8254;MQ=34.63;MQ0=130;MQRankSum=1.642;QD=11.79;ReadPosRankSum=0.091;VQSLOD=3.0493;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,1:13:19.70:0,20,217	0/0:9,0:8:19.21:0,19,86	./.	./.	0/0:21,0:18:28.38:0,28,124	0/0:12,0:9:8.23:0,8,37	0/0:12,1:3:8.86:0,9,80	0/0:21,0:14:39.06:0,39,417	0/0:19,0:10:16.47:0,16,74	0/0:15,0:14:30.24:0,30,135	0/0:12,0:11:19.21:0,19,85	0/0:24,0:15:19.21:0,19,86	0/0:17,0:9:19.21:0,19,86	0/0:18,0:14:24.70:0,25,110	0/0:15,0:10:16.47:0,16,74	0/0:12,0:7:10.98:0,11,49	0/0:18,0:13:8.45:0,8,44	0/0:20,0:15:23.83:0,24,104	0/0:12,0:8:18.01:0,18,185	0/0:19,0:15:36.03:0,36,372	./.	0/0:11,0:12:25.27:0,25,114	0/0:10,0:10:21.96:0,22,98	0/0:17,0:12:19.21:0,19,85	0/0:16,0:16:38.42:0,38,171	1/1:2,18:15:32.48:352,32,0	0/0:26,1:21:22.08:0,22,446	1/1:3,4:6:8.98:78,9,0
chr10	82369610	.	A	AAG	6645.87	PASS	AB=0.955;AC=35;AF=0.700;AN=50;BaseQRankSum=-1.202;DP=456;FS=0.000;HRun=0;HaplotypeScore=38.8941;InbreedingCoeff=0.9098;MQ=38.03;MQ0=122;MQRankSum=0.491;QD=22.23;ReadPosRankSum=4.536;VQSLOD=4.7460;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:16:38.92:0,39,412	1/1:0,11:11:21.07:362,21,0	./.	./.	1/1:1,23:22:38.99:588,39,0	1/1:0,13:11:9.03:155,9,0	0/0:15,0:4:11.50:0,11,117	0/0:20,0:14:42.10:0,42,566	1/1:0,20:11:18.06:309,18,0	1/1:1,15:15:36.11:595,36,0	1/1:1,14:14:21.07:362,21,0	1/1:2,18:13:21.07:361,21,0	1/1:0,18:10:21.07:360,21,0	1/1:1,16:13:27.09:463,27,0	1/1:2,16:13:18.06:310,18,0	1/1:2,10:8:12.04:206,12,0	1/1:2,14:11:11.95:144,12,0	1/1:0,19:15:27.09:452,27,0	0/0:13,0:9:27.03:0,27,318	0/0:22,0:17:47.83:0,48,548	./.	1/1:2,10:12:30.10:482,30,0	1/1:1,10:12:24.08:412,24,0	1/1:1,15:13:21.07:362,21,0	1/1:1,17:18:42.13:722,42,0	0/1:20,1:17:1.07:1,0,313	0/0:28,0:22:54.02:0,54,667	0/0:7,0:6:14.89:0,15,107
chr10	82370228	.	G	GA	19124.62	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-15.904;DP=718;FS=0.284;HRun=1;HaplotypeScore=65.0865;InbreedingCoeff=0.9998;MQ=93.32;MQ0=0;MQRankSum=-3.752;QD=43.66;ReadPosRankSum=6.120;VQSLOD=4.3335;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,123,1700	1/1:1,10:11:30.10:480,30,0	0/0:32,0:32:90.22:0,90,1178	0/0:30,0:30:87.69:0,88,1160	1/1:1,23:24:60.20:959,60,0	1/1:0,21:21:51.17:815,51,0	0/0:10,0:10:30.10:0,30,420	0/0:35,0:35:99:0,102,1407	1/1:0,15:15:39.13:624,39,0	1/1:0,26:26:78.27:1238,78,0	1/1:0,21:21:45.15:719,45,0	1/1:1,28:29:75.25:1199,75,0	1/1:1,32:33:93.32:1487,93,0	1/1:0,26:26:72.25:1151,72,0	1/1:0,31:31:87.30:1391,87,0	1/1:0,26:26:78.27:1247,78,0	1/1:2,34:36:99:1582,99,0	1/1:0,28:28:84.29:1343,84,0	0/0:24,0:24:69.23:0,69,961	0/0:29,0:29:84.28:0,84,1173	1/1:0,33:33:87.30:1391,87,0	1/1:1,19:20:51.17:815,51,0	1/1:0,16:16:45.15:719,45,0	1/1:0,27:27:81.28:1295,81,0	1/1:1,14:15:42.14:671,42,0	0/0:35,0:35:99:0,102,1387	0/0:21,0:21:63.21:0,63,880	0/0:13,0:13:39.13:0,39,545
chr10	82372326	.	TAAAA	T	13618.19	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=13.086;DP=574;FS=10.651;HRun=11;HaplotypeScore=129.4760;InbreedingCoeff=0.9960;MQ=59.03;MQ0=1;MQRankSum=-4.541;QD=37.21;ReadPosRankSum=8.295;VQSLOD=1.8850;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:36:99:0,105,2535	1/1:0,7:7:21.07:328,21,0	0/0:14,0:12:24.03:0,24,519	0/0:15,0:13:21.54:0,22,432	1/1:2,21:21:45.12:704,45,0	1/1:2,19:21:48.16:751,48,0	0/0:24,0:25:66.21:0,66,1521	0/0:17,0:18:48.16:0,48,1104	1/1:0,7:7:18.06:282,18,0	1/1:3,24:27:63.05:957,63,0	1/1:2,17:18:48.14:750,48,0	1/1:8,19:27:60.17:938,60,0	1/1:1,26:27:75.25:1173,75,0	1/1:2,20:22:57.18:892,57,0	1/1:0,13:13:39.13:610,39,0	1/1:3,8:11:21.05:328,21,0	1/1:2,25:27:75.23:1147,75,0	1/1:3,19:22:54.16:845,54,0	0/0:14,0:15:45.15:0,45,1029	0/0:29,0:29:75.26:0,75,1795	1/1:6,24:30:60.16:937,60,0	1/1:2,16:18:42.12:657,42,0	1/1:4,22:26:57.17:891,57,0	1/1:6,22:28:63.14:958,63,0	1/1:1,10:11:30.10:469,30,0	0/0:5,0:28:81.24:0,81,1514	0/0:17,0:18:54.18:0,54,1289	0/0:1,0:8:21.07:0,21,408
chr10	82372419	.	C	CCAG	17919.51	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=10.552;DP=528;FS=64.361;HRun=0;HaplotypeScore=98.2540;InbreedingCoeff=0.9980;MQ=68.88;MQ0=0;MQRankSum=-6.231;QD=57.62;ReadPosRankSum=6.438;VQSLOD=1.7864;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,2174	1/1:1,8:9:24.08:567,24,0	0/0:12,0:12:30.10:0,30,492	0/0:10,0:11:29.79:0,30,424	1/1:5,7:12:18.05:423,18,0	1/1:1,16:19:42.14:991,42,0	0/0:27,0:27:75.26:0,75,1307	0/0:18,0:18:48.10:0,48,759	1/1:0,17:18:51.18:1203,51,0	1/1:4,10:14:36.12:785,36,0	1/1:1,12:14:33.11:778,33,0	1/1:3,19:22:57.20:1345,57,0	1/1:4,19:23:66.18:1472,66,0	1/1:0,11:10:30.10:704,30,0	1/1:1,12:13:36.12:848,36,0	1/1:2,15:16:45.15:1059,45,0	1/1:2,18:20:54.19:1275,54,0	1/1:1,16:18:51.18:1205,51,0	0/0:15,0:15:42.13:0,42,689	0/0:23,0:22:48.15:0,48,815	1/1:2,22:24:51.18:1204,51,0	1/1:5,11:16:36.11:802,36,0	1/1:1,13:15:36.12:849,36,0	1/1:3,25:29:66.23:1558,66,0	1/1:0,15:17:36.12:850,36,0	0/0:33,0:33:90.24:0,90,1474	0/0:23,0:23:60.21:0,60,1058	0/0:10,0:9:27.09:0,27,450
chr10	82372523	.	T	TAC	1425.68	PASS	AB=0.965;AC=34;AF=0.654;AN=52;BaseQRankSum=0.397;DP=661;FS=6.412;HRun=0;HaplotypeScore=210.7472;InbreedingCoeff=0.1771;MQ=52.03;MQ0=7;MQRankSum=-1.068;QD=2.87;ReadPosRankSum=-0.132;VQSLOD=2.1152;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:57:47.22:0,47,418	0/0:17,0:17:1:0,1,3	1/1:20,0:16:0.89:2,1,0	./.	0/1:25,0:24:0:0,0,0	0/1:16,0:15:0:0,0,0	0/0:22,0:23:17.48:0,17,159	1/1:24,0:24:0.30:86,0,0	0/1:17,0:17:0.01:1,0,0	0/1:38,0:36:10.06:149,0,10	0/1:32,0:30:0:0,0,0	1/1:22,0:21:5.95:45,6,0	0/1:14,0:13:0.28:40,0,0	1/1:21,0:19:0.47:1,0,0	./.	1/1:18,0:17:2.99:24,3,0	1/1:21,0:21:6:56,6,0	1/1:7,0:8:8.09:48,8,0	1/1:12,1:12:3.01:45,3,0	1/1:29,9:38:4.96:323,5,0	0/1:31,0:28:0:0,0,0	0/0:22,0:21:0:0,0,0	1/1:22,0:19:2.98:24,3,0	1/1:33,0:33:10.01:87,10,0	1/1:21,0:21:3.74:25,4,0	0/1:27,8:36:99:397,0,152	0/1:15,1:16:48.93:95,0,49	0/1:9,0:10:51.39:98,0,51
chr10	82372543	.	C	CATGTAT	585.46	PASS	AB=0.926;AC=7;AF=0.125;AN=56;BaseQRankSum=8.534;DP=947;FS=47.126;HRun=0;HaplotypeScore=323.9011;InbreedingCoeff=0.0806;MQ=35.90;MQ0=19;MQRankSum=-6.479;QD=3.80;ReadPosRankSum=-0.963;VQSLOD=0.9658;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:63,1:62:99:0,120,2749	0/0:19,3:22:2.26:0,2,72	0/0:46,0:10:26.30:0,26,530	0/0:53,0:18:51.17:0,51,1078	0/0:32,4:35:5.73:0,6,145	0/0:19,1:18:9.41:0,9,220	0/0:27,0:27:39.60:0,40,933	0/0:40,0:29:81.20:0,81,1564	0/0:17,1:17:3.73:0,4,73	0/1:62,4:63:99:575,0,1629	0/0:36,4:38:5.63:0,6,141	0/0:25,1:25:8.37:0,8,149	1/1:16,3:18:1.46:10,1,0	0/0:29,1:28:13.21:0,13,265	1/1:25,0:25:0.24:1,0,0	0/1:21,1:21:38.31:38,0,53	0/0:22,0:22:17.82:0,18,394	0/0:13,0:13:24.96:0,25,383	0/0:17,0:14:38.24:0,38,726	0/0:51,2:58:55.22:0,55,1053	0/0:37,0:32:1.40:0,1,139	0/0:35,5:39:2.02:0,2,72	0/0:31,4:32:5.53:0,6,131	0/0:29,1:30:24.06:0,24,450	0/0:38,3:41:1.77:0,2,56	0/0:63,0:63:99:0,116,3015	0/1:19,2:22:66.36:66,0,765	0/0:14,0:14:39.13:0,39,864
chr10	82372549	.	C	CAT	646.44	PASS	AB=0.987;AC=23;AF=0.411;AN=56;BaseQRankSum=5.402;DP=1072;FS=1.032;HRun=0;HaplotypeScore=360.9101;InbreedingCoeff=0.1261;MQ=36.36;MQ0=19;MQRankSum=-2.847;QD=1.00;ReadPosRankSum=5.279;VQSLOD=1.3146;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:69,0:67:99:0,111,1115	0/1:25,0:25:3.17:20,0,3	0/0:53,0:10:27.65:0,28,203	0/0:56,0:21:37.13:0,37,370	1/1:38,1:37:5.96:48,6,0	0/1:21,0:19:14.13:14,0,42	0/0:27,0:27:38.64:0,39,417	0/0:44,0:32:39.98:0,40,463	1/1:21,0:20:2.11:16,2,0	0/1:76,0:74:99:151,0,445	0/1:46,0:44:18.98:19,0,19	1/1:30,0:29:0.87:3,1,0	1/1:26,0:26:0.88:31,1,0	0/0:33,0:31:10.13:0,10,71	0/1:31,0:31:0.02:0,0,0	0/0:25,0:24:2.73:0,3,21	0/1:23,1:24:23.76:126,0,24	0/0:15,0:15:3.27:0,3,36	0/0:16,0:14:14.04:0,14,241	0/1:66,0:66:95.27:95,0,254	1/1:40,0:35:5.60:42,6,0	1/1:47,0:46:2.95:25,3,0	0/0:41,0:38:0.46:0,0,1	0/1:27,2:29:18.16:103,0,18	1/1:52,1:53:2.70:49,3,0	0/1:68,0:67:57.81:58,0,1040	0/0:30,0:30:15.34:0,15,373	0/0:19,0:19:1.21:0,1,303
chr10	82372557	.	C	CAT	470.46	PASS	AB=0.969;AC=13;AF=0.232;AN=56;BaseQRankSum=1.835;DP=1095;FS=11.102;HRun=0;HaplotypeScore=386.8537;InbreedingCoeff=-0.1766;MQ=35.22;MQ0=18;MQRankSum=-1.477;QD=0.95;ReadPosRankSum=0.247;VQSLOD=0.8559;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:65:99:0,102,1046	0/0:23,1:24:9.16:0,9,50	0/0:55,0:11:31.16:0,31,259	0/0:57,0:22:40.77:0,41,465	0/0:37,2:37:5.94:0,6,43	0/0:20,0:18:2.66:0,3,21	0/0:30,0:30:30.09:0,30,428	0/0:48,0:35:25.93:0,26,459	0/0:19,4:22:3.64:0,4,20	0/1:83,3:83:77.93:78,0,729	0/0:43,1:42:2.56:0,3,22	1/1:28,3:31:2.44:38,2,0	0/1:28,2:30:23.51:26,0,24	0/1:36,1:35:7.27:41,0,7	0/1:32,1:33:0.02:0,0,0	0/1:24,1:24:23.67:42,0,24	0/0:18,0:18:1.85:0,2,60	0/1:16,1:17:61.16:89,0,61	0/0:20,0:18:14.51:0,15,247	0/1:73,0:73:91.91:92,0,289	0/0:38,2:35:5.50:0,6,40	0/0:45,0:44:2.57:0,3,21	0/1:39,1:37:17.61:41,0,18	0/1:24,2:26:14.34:97,0,14	0/0:54,0:55:2.59:0,3,10	0/1:66,0:65:38.30:38,0,1052	0/1:29,0:29:26.66:27,0,309	0/0:18,0:18:3.23:0,3,312
chr10	82372559	.	C	CACACACAT	2300.62	PASS	AB=0.994;AC=34;AF=0.607;AN=56;BaseQRankSum=9.521;DP=1079;FS=12.361;HRun=0;HaplotypeScore=433.4414;InbreedingCoeff=0.5109;MQ=36.09;MQ0=17;MQRankSum=-7.075;QD=3.49;ReadPosRankSum=-2.461;VQSLOD=0.3994;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:64:98.93:0,99,1483	1/1:21,1:22:10.19:71,10,0	0/0:57,0:14:24.66:0,25,205	0/0:58,0:24:44.03:0,44,324	1/1:34,2:34:6.83:50,7,0	1/1:18,0:17:4.01:27,4,0	0/0:30,0:30:40.79:0,41,478	0/1:47,0:33:30.43:30,0,362	1/1:19,4:22:6.25:38,6,0	0/1:82,0:80:19.63:916,0,20	1/1:41,1:40:3.27:21,3,0	1/1:29,3:32:7.21:107,7,0	1/1:28,1:29:2.45:121,2,0	1/1:33,0:32:4.31:15,4,0	1/1:33,0:34:0.43:2,0,0	0/1:25,0:24:15.08:29,0,15	1/1:14,0:17:7.73:267,8,0	1/1:15,0:17:26.67:438,27,0	0/0:21,0:19:10.94:0,11,172	0/0:72,0:73:53.88:0,54,517	1/1:37,0:35:6.07:47,6,0	1/1:41,0:41:1.98:25,2,0	0/1:39,1:38:2.37:38,0,2	1/1:20,2:24:14.99:188,15,0	1/1:52,0:53:7.23:60,7,0	0/0:67,0:67:37:0,37,1368	0/0:28,0:28:59.07:0,59,479	0/0:18,0:18:39.95:0,40,424
chr10	82372561	.	CAT	C	806.13	PASS	AB=0.876;AC=12;AF=0.214;AN=56;BaseQRankSum=10.170;DP=1101;FS=33.442;HRun=0;HaplotypeScore=386.9015;InbreedingCoeff=0.0424;MQ=35.88;MQ0=17;MQRankSum=-7.355;QD=2.22;ReadPosRankSum=-1.032;VQSLOD=1.0455;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:58,5:63:98.10:0,98,1723	0/1:19,3:22:33.63:34,0,117	0/0:61,0:14:37.59:0,38,624	0/0:63,0:27:52.09:0,52,1222	0/0:30,9:37:6:0,6,116	0/0:16,4:18:3.46:0,3,58	0/0:30,1:31:39.07:0,39,709	0/0:46,1:33:24.08:0,24,1170	0/0:16,6:21:4.46:0,4,61	0/1:76,11:84:99:446,0,1389	0/0:37,6:41:3.46:0,3,58	1/1:25,7:32:4.34:27,4,0	0/0:22,8:30:11.01:0,11,80	0/0:25,8:32:0.63:0,1,49	0/1:28,6:34:0.03:0,0,0	1/1:15,9:23:8.85:106,9,0	0/0:17,1:18:4.14:0,4,231	0/1:15,2:17:33.06:98,0,33	0/1:20,1:18:0.53:1,0,594	0/0:67,10:77:34.75:0,35,1328	0/0:37,1:35:6.47:0,6,116	0/0:35,8:42:4.36:0,4,61	0/1:34,9:40:34.70:35,0,50	0/0:22,1:23:2:0,2,163	0/1:45,9:54:36.55:37,0,52	0/0:66,0:65:26.85:0,27,2576	0/1:24,5:29:99:160,0,622	0/0:20,0:20:48.16:0,48,898
chr10	82372617	.	T	TAC	404.51	PASS	AB=0.992;AC=13;AF=0.232;AN=56;BaseQRankSum=7.436;DP=1385;FS=6.486;HRun=0;HaplotypeScore=548.0598;InbreedingCoeff=-0.1364;MQ=33.69;MQ0=11;MQRankSum=-7.013;QD=0.67;ReadPosRankSum=1.760;VQSLOD=-0.0221;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:56:24.94:0,25,320	0/1:25,0:25:7.59:8,0,86	0/0:50,0:26:57.14:0,57,717	0/0:63,0:29:64.36:0,64,803	0/0:60,0:59:2.86:0,3,25	0/0:24,0:24:6:0,6,64	0/0:51,0:50:29.07:0,29,359	0/0:66,0:60:90.56:0,91,1339	0/0:30,0:30:11.29:0,11,149	0/1:97,1:97:99:184,0,1038	1/1:46,0:45:0.11:1,0,0	0/1:38,0:38:18.97:19,0,39	0/0:37,0:37:2.61:0,3,168	0/1:49,0:49:33.47:59,0,33	0/0:47,2:49:6.19:0,6,66	0/1:41,0:41:28.22:28,0,29	0/1:29,0:29:41.65:42,0,92	0/1:14,1:15:99:104,0,117	0/0:37,0:35:75.80:0,76,812	0/0:89,0:89:36.54:0,37,481	0/0:35,0:30:2.81:0,3,39	0/1:66,0:66:0.26:0,0,0	0/1:51,1:52:0.06:0,0,0	0/0:23,0:23:5.77:0,6,52	0/0:79,2:80:2.70:0,3,43	0/1:104,0:98:77.07:77,0,1753	0/1:40,0:40:12.38:12,0,412	0/0:27,0:27:25.27:0,25,549
chr10	82372646	.	TAC	T	2823.33	PASS	AB=0.859;AC=41;AF=0.759;AN=54;BaseQRankSum=-7.779;DP=1289;FS=55.333;HRun=0;HaplotypeScore=437.3226;InbreedingCoeff=0.1449;MQ=36.72;MQ0=21;MQRankSum=5.987;QD=2.67;ReadPosRankSum=-2.729;VQSLOD=-0.1008;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:45,0:55:17.48:84,17,0	1/1:16,6:22:14.93:168,15,0	./.	0/0:68,0:19:5.98:0,6,48	1/1:47,4:51:8.26:80,8,0	1/1:17,8:25:9.02:100,9,0	0/1:45,7:51:4.11:91,0,4	0/0:80,0:67:1.69:0,2,177	1/1:18,7:27:8.75:100,9,0	0/1:76,12:85:99:364,0,156	1/1:39,4:43:3.86:36,4,0	1/1:29,6:38:5.64:65,6,0	1/1:29,2:32:9:101,9,0	0/1:32,14:46:21.73:211,0,22	1/1:28,11:40:11.63:134,12,0	0/1:30,7:40:4.53:90,0,5	1/1:20,7:28:12.03:134,12,0	0/1:10,4:14:30.48:119,0,30	0/1:32,0:30:2.68:3,0,36	1/1:67,0:69:11.17:55,11,0	1/1:30,7:35:11.43:133,11,0	1/1:51,6:58:12.04:135,12,0	1/1:33,4:37:6.49:68,6,0	1/1:21,12:34:38.73:435,39,0	1/1:54,9:64:17.74:179,18,0	0/1:82,0:83:4.85:5,0,419	1/1:25,0:34:4.23:78,4,0	0/0:23,0:25:0.13:0,0,65
chr10	82373247	.	AT	A	382.19	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.363;DP=606;FS=4.301;HRun=9;HaplotypeScore=87.6257;InbreedingCoeff=0.8872;MQ=62.46;MQ0=0;MQRankSum=-0.296;QD=15.29;ReadPosRankSum=1.296;VQSLOD=4.0001;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:38:96.03:0,96,1069	0/0:15,0:15:42.10:0,42,465	0/0:15,0:14:12.02:0,12,119	0/0:9,0:4:4.97:0,5,18	0/0:28,0:28:72.20:0,72,820	0/0:27,0:27:78.05:0,78,869	0/0:11,0:11:30.07:0,30,335	0/0:30,0:30:84.24:0,84,961	0/0:24,0:24:69.20:0,69,796	0/0:31,0:31:84.23:0,84,951	0/0:22,0:22:57.16:0,57,649	0/0:18,0:18:48.05:0,48,527	0/0:15,0:15:39.10:0,39,439	0/0:28,0:28:84.25:0,84,969	0/0:29,0:29:84.22:0,84,948	0/0:19,0:19:51.15:0,51,589	0/0:26,0:26:69.18:0,69,775	0/0:19,0:19:48.11:0,48,540	0/0:19,0:19:45.11:0,45,508	0/0:31,0:31:87.24:0,87,986	0/0:19,0:19:51.14:0,51,579	0/0:18,0:18:45.10:0,45,492	0/0:28,0:28:75.21:0,75,854	0/0:6,0:6:15.04:0,15,173	0/0:23,1:24:35.64:0,36,638	1/1:6,16:22:29.94:414,30,0	0/0:31,0:31:90.20:0,90,1012	1/1:0,3:3:9:82,9,0
chr10	82373475	.	CT	C	12809.33	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=17.171;DP=800;FS=2.748;HRun=1;HaplotypeScore=186.9664;InbreedingCoeff=0.9988;MQ=78.16;MQ0=6;MQRankSum=-6.369;QD=30.57;ReadPosRankSum=5.156;VQSLOD=4.5474;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,154,2408	1/1:5,12:17:44.42:490,44,0	0/0:68,0:50:99:0,131,1700	0/0:85,0:48:71.61:0,72,1277	1/1:2,18:20:48.14:596,48,0	1/1:5,13:18:40.83:491,41,0	0/0:27,0:27:76.58:0,77,1199	0/0:33,0:33:87.29:0,87,1324	1/1:2,20:22:56.83:677,57,0	1/1:5,22:27:76.62:820,77,0	1/1:4,15:19:47.64:589,48,0	1/1:3,22:25:65.66:819,66,0	1/1:6,24:30:79.80:937,80,0	1/1:3,13:16:47.14:532,47,0	1/1:10,23:33:94.61:1100,95,0	1/1:1,14:15:44.81:556,45,0	1/1:2,13:16:35.48:431,35,0	1/1:2,15:17:48.15:617,48,0	0/0:13,0:13:39.13:0,39,594	0/0:36,0:36:99:0,105,1639	1/1:7,28:35:86.12:987,86,0	1/1:4,18:22:58.04:625,58,0	1/1:1,21:22:44.89:565,45,0	1/1:6,27:33:92.44:1194,92,0	1/1:7,25:32:70.53:783,71,0	0/0:31,2:32:19.48:0,19,1334	0/0:27,0:27:81.28:0,81,1285	0/0:8,0:8:24.08:0,24,374
chr10	82373478	.	TC	T	13028.26	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=18.012;DP=799;FS=3.162;HRun=1;HaplotypeScore=187.1427;InbreedingCoeff=0.9987;MQ=78.92;MQ0=6;MQRankSum=-5.034;QD=31.09;ReadPosRankSum=3.973;VQSLOD=4.6108;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,154,2408	1/1:3,12:15:38.07:439,38,0	0/0:69,0:51:99:0,132,1720	0/0:86,0:49:64.18:0,64,1186	1/1:3,19:22:54.13:644,54,0	1/1:5,13:18:40.64:474,41,0	0/0:25,0:25:72.16:0,72,1128	0/0:33,0:33:90.30:0,90,1362	1/1:2,20:22:58.97:689,59,0	1/1:6,22:28:76.07:817,76,0	1/1:4,15:19:53.48:630,53,0	1/1:4,22:26:71.80:879,72,0	1/1:6,24:30:88.73:1039,89,0	1/1:3,13:16:46.89:530,47,0	1/1:10,23:33:97.38:1136,97,0	1/1:2,14:16:47.63:581,48,0	1/1:2,13:15:32.13:391,32,0	1/1:3,15:18:51.15:641,51,0	0/0:12,0:12:36.11:0,36,544	0/0:35,0:35:99:0,102,1600	1/1:4,28:32:79.60:915,80,0	1/1:4,18:22:57.60:640,58,0	1/1:3,18:21:47.97:585,48,0	1/1:7,27:34:94.97:1209,95,0	1/1:8,24:32:70.15:790,70,0	0/0:31,2:32:19.34:0,19,1321	0/0:28,0:28:84.27:0,84,1308	0/0:8,0:8:24.08:0,24,374
chr10	82373960	.	G	GA	2661.17	PASS	AB=0.612;AC=14;AF=0.250;AN=56;BaseQRankSum=-10.597;DP=644;FS=2.970;HRun=11;HaplotypeScore=97.5133;InbreedingCoeff=0.7645;MQ=71.44;MQ0=1;MQRankSum=1.361;QD=13.79;ReadPosRankSum=-1.715;VQSLOD=3.4977;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,2:30:30.76:209,31,0	0/0:3,0:13:23.14:0,23,82	0/0:25,0:21:17.93:0,18,167	0/0:20,0:19:16.99:0,17,182	0/0:27,1:29:37.31:0,37,461	0/0:18,0:19:52.83:0,53,401	1/1:1,13:14:18.85:373,19,0	1/1:6,14:20:18.84:373,19,0	0/0:27,0:28:48.16:0,48,510	0/0:37,0:38:85.63:0,86,651	0/0:23,0:24:43.33:0,43,343	0/0:19,0:19:50.80:0,51,395	0/0:26,1:27:29.11:0,29,393	0/0:13,0:14:14.49:0,14,234	0/0:23,0:24:58.81:0,59,447	0/0:22,1:23:35.30:0,35,457	0/0:23,0:26:59.88:0,60,435	0/0:17,0:18:46.83:0,47,354	1/1:12,15:29:2.04:424,2,0	1/1:9,26:35:44.25:527,44,0	0/0:10,0:10:14.92:0,15,116	0/0:19,1:20:14.36:0,14,291	0/0:25,0:26:16.35:0,16,297	0/0:18,0:18:41.77:0,42,320	0/0:23,2:25:28.35:0,28,390	0/1:8,15:23:62.10:335,0,62	1/1:5,21:29:30.55:446,31,0	0/1:5,8:13:8.58:159,0,9
chr10	82374337	.	GCACGCA	G	4607.15	PASS	AB=1.000;AC=35;AF=0.648;AN=54;BaseQRankSum=4.462;DP=478;FS=6.177;HRun=0;HaplotypeScore=100.2953;InbreedingCoeff=0.8444;MQ=74.62;MQ0=13;MQRankSum=-1.347;QD=17.13;ReadPosRankSum=4.553;VQSLOD=3.2086;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:40.83:0,41,406	1/1:7,0:6:14.94:117,15,0	0/0:35,0:26:68.56:0,69,602	0/0:35,0:24:50.81:0,51,513	1/1:11,0:11:20.96:171,21,0	1/1:13,0:13:35.94:294,36,0	0/0:38,0:37:68.05:0,68,905	0/0:14,0:14:33.08:0,33,242	1/1:0,10:10:3.01:70,3,0	1/1:15,0:15:32.99:297,33,0	1/1:10,0:8:11.98:99,12,0	1/1:0,14:15:15.05:350,15,0	1/1:13,0:17:44.95:484,45,0	1/1:0,14:15:6.02:122,6,0	1/1:10,0:9:23.93:220,24,0	1/1:13,4:17:44.99:478,45,0	1/1:20,0:20:35.76:271,36,0	1/1:16,1:17:47.61:405,48,0	0/0:16,0:16:46.79:0,47,351	0/0:11,0:11:23.81:0,24,173	1/1:40,0:39:80.80:690,81,0	1/1:14,2:15:29.82:282,30,0	1/1:8,0:8:11.82:88,12,0	./.	1/1:9,0:9:17.98:151,18,0	0/1:17,0:16:18.21:18,0,195	0/0:12,0:12:29.87:0,30,280	0/0:2,0:2:5.92:0,6,39
chr10	82374626	.	TG	T	7610.57	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=12.077;DP=459;FS=10.438;HRun=3;HaplotypeScore=73.5926;InbreedingCoeff=0.9454;MQ=84.02;MQ0=0;MQRankSum=-7.655;QD=30.94;ReadPosRankSum=6.047;VQSLOD=3.9129;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,1897	1/1:0,11:11:27.08:332,27,0	0/0:11,0:11:24.08:0,24,335	0/0:22,0:21:51.16:0,51,702	1/1:0,8:8:17.97:203,18,0	1/1:0,16:16:39.12:483,39,0	0/0:25,0:25:72.18:0,72,994	0/0:30,0:30:81.26:0,81,1149	1/1:1,11:12:33.10:409,33,0	1/1:0,12:12:33.10:408,33,0	1/1:0,5:5:8.37:110,8,0	1/1:0,13:13:36.11:446,36,0	1/1:0,10:10:30.09:371,30,0	1/1:0,11:11:33.10:409,33,0	1/1:0,2:2:6.02:74,6,0	1/1:0,10:10:27.08:335,27,0	1/1:0,20:20:45.14:557,45,0	1/1:0,21:21:60.19:743,60,0	0/0:21,0:21:63.21:0,63,905	0/0:11,0:11:33.11:0,33,475	1/1:2,44:46:99:1393,114,0	1/1:0,17:17:45.11:557,45,0	1/1:1,2:3:3.01:37,3,0	1/1:0,14:14:32.80:408,33,0	1/1:0,15:15:27.08:335,27,0	0/0:17,1:18:16.96:0,17,658	0/0:18,0:18:54.18:0,54,777	0/0:11,0:11:27.09:0,27,389
chr10	82374687	.	G	GCA	970.16	PASS	AB=0.947;AC=34;AF=0.708;AN=48;BaseQRankSum=-0.061;DP=418;FS=0.000;HRun=0;HaplotypeScore=148.8663;InbreedingCoeff=0.0465;MQ=50.95;MQ0=7;MQRankSum=-0.319;QD=2.65;ReadPosRankSum=1.875;VQSLOD=2.4702;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,18:43:2.09:387,0,2	1/1:5,0:5:2.60:10,3,0	1/1:29,0:15:0.47:1,0,0	./.	0/1:15,0:15:0.32:0,0,1	0/1:12,0:12:3.91:4,0,13	0/1:16,4:22:20.34:123,0,20	1/1:25,0:24:4.23:26,4,0	./.	1/1:14,0:14:3.41:19,3,0	1/1:8,0:7:4.27:17,4,0	./.	1/1:4,0:4:2.80:13,3,0	0/1:4,0:4:0:0,0,0	0/1:3,0:3:0.79:8,0,1	./.	1/1:20,0:19:6.74:40,7,0	0/1:17,0:17:2.36:2,0,10	0/1:24,0:23:50.63:107,0,51	1/1:10,8:19:9.03:135,9,0	1/1:25,0:23:2.04:6,2,0	0/1:11,0:17:0:0,0,0	1/1:11,0:11:0.59:17,1,0	0/1:12,0:11:0:0,0,0	0/1:12,0:12:4.87:7,0,5	0/0:16,0:16:7.30:0,7,154	0/1:15,1:17:61.87:156,0,62	1/1:7,0:7:0.47:1,0,0
chr10	82374690	.	C	CGG	311.91	PASS	AB=0.748;AC=18;AF=0.391;AN=46;BaseQRankSum=6.549;DP=312;FS=27.711;HRun=0;HaplotypeScore=92.5736;InbreedingCoeff=0.3265;MQ=51.46;MQ0=10;MQRankSum=-5.862;QD=3.76;ReadPosRankSum=1.082;VQSLOD=0.5245;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:69.62:0,70,790	./.	0/0:24,0:10:23.60:0,24,351	0/0:24,0:11:29.92:0,30,435	0/1:4,4:7:0.27:0,0,0	0/1:1,4:5:12.28:86,0,12	0/0:26,0:26:47.22:0,47,611	0/0:24,0:23:67.08:0,67,934	./.	0/1:5,1:6:41.26:41,0,67	1/1:3,2:4:4.75:17,5,0	./.	1/1:2,1:3:3.01:36,3,0	./.	1/1:0,2:2:3.01:40,3,0	./.	0/1:4,4:8:25.83:130,0,26	0/1:6,1:7:0.79:1,0,116	0/0:22,0:21:54.13:0,54,712	0/0:21,0:21:31.34:0,31,418	1/1:9,0:7:2.92:8,3,0	0/1:10,1:11:0:0,0,0	0/1:5,2:7:1.97:16,0,2	1/1:4,2:5:1.36:3,1,0	0/1:3,3:6:3.79:66,0,4	0/0:15,0:15:25.11:0,25,587	0/0:18,0:17:35.63:0,36,390	0/0:7,0:7:21.07:0,21,283
chr10	82374698	.	C	CGCGCGCGG	1308.80	PASS	AB=0.752;AC=15;AF=0.341;AN=44;BaseQRankSum=7.562;DP=317;FS=18.209;HRun=0;HaplotypeScore=115.2452;InbreedingCoeff=0.3784;MQ=49.55;MQ0=16;MQRankSum=-5.899;QD=20.77;ReadPosRankSum=1.836;VQSLOD=1.7067;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:81.11:0,81,1868	./.	0/0:24,0:10:16.67:0,17,384	0/0:30,0:12:30.10:0,30,776	0/1:4,4:7:0.47:0,0,1	1/1:1,2:5:12.01:240,12,0	0/0:24,0:24:47.66:0,48,1252	0/0:21,0:20:54.16:0,54,1278	./.	0/1:3,0:3:35.60:150,0,36	./.	./.	0/1:2,1:3:22.57:108,0,23	./.	1/1:0,2:2:5.81:125,6,0	./.	0/1:4,4:8:28.48:303,0,28	0/1:4,1:7:60.32:262,0,60	0/0:19,0:17:48.10:0,48,1067	0/0:22,0:22:39.12:0,39,967	0/0:8,0:6:0.47:0,0,1	1/1:10,1:11:0.30:1,0,0	1/1:5,2:8:2:55,2,0	0/0:4,2:5:0.77:0,1,1	1/1:5,2:7:8.30:201,8,0	0/0:16,0:16:48.16:0,48,1387	0/0:22,0:21:48.51:0,49,1123	0/0:7,0:7:18.04:0,18,413
chr10	82375356	.	TTCAAGGGAC	T	2220.68	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.584;DP=670;FS=0.000;HRun=0;HaplotypeScore=193.5721;InbreedingCoeff=0.9937;MQ=89.02;MQ0=0;MQRankSum=-6.959;QD=76.58;ReadPosRankSum=0.290;VQSLOD=3.5778;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,5978	0/0:8,0:8:24.08:0,24,1065	0/0:27,0:26:75.24:0,75,2821	0/0:29,0:29:76.49:0,76,2861	0/0:32,0:32:96.31:0,96,4269	0/0:39,0:39:99:0,114,4915	0/0:20,0:20:57.17:0,57,2352	0/0:30,0:30:84.28:0,84,3494	0/0:16,0:16:48.16:0,48,2187	0/0:40,0:40:99:0,114,4996	0/0:22,0:21:60.21:0,60,2916	0/0:14,0:14:42.14:0,42,2044	0/0:26,0:26:75.26:0,75,3476	0/0:29,0:29:84.29:0,84,3941	0/0:25,0:25:75.26:0,75,3469	0/0:22,0:22:66.21:0,66,2986	0/0:34,0:33:99:0,99,4700	0/0:20,0:20:60.21:0,60,2793	0/0:8,0:8:24.08:0,24,1124	0/0:14,0:14:42.14:0,42,1883	0/0:35,0:35:99:0,102,4731	0/0:27,0:27:78.09:0,78,3787	0/0:17,0:17:51.18:0,51,2421	0/0:23,0:23:66.23:0,66,3040	0/0:18,0:18:48.16:0,48,2236	1/1:1,22:23:63.18:1789,63,0	0/0:22,0:22:63.22:0,63,2866	1/1:0,6:6:18.06:551,18,0
chr10	82375399	.	C	CCG	150.42	PASS	AB=0.750;AC=1;AF=0.018;AN=56;BaseQRankSum=4.732;DP=704;FS=6.313;HRun=0;HaplotypeScore=99.6577;InbreedingCoeff=-0.0182;MQ=81.15;MQ0=1;MQRankSum=4.792;QD=5.57;ReadPosRankSum=-1.855;VQSLOD=2.3036;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.30:0,96,1427	0/0:11,0:11:33.11:0,33,505	0/1:18,9:26:99:225,0,476	0/0:24,0:24:48.57:0,49,657	0/0:23,0:23:66.21:0,66,986	0/0:40,0:40:99:0,120,1791	0/0:34,0:34:99:0,99,1411	0/0:29,0:29:87.28:0,87,1296	0/0:17,0:17:51.15:0,51,757	0/0:35,0:35:99:0,105,1568	0/0:18,0:17:54.17:0,54,795	0/0:19,0:19:54.16:0,54,785	0/0:28,0:28:84.23:0,84,1238	0/0:28,0:28:81.24:0,81,1193	0/0:26,0:26:75.24:0,75,1126	0/0:19,0:19:57.18:0,57,851	0/0:43,0:42:99:0,123,1832	0/0:18,0:18:54.18:0,54,827	0/0:20,0:20:57.18:0,57,850	0/0:14,0:14:41.88:0,42,609	0/0:40,0:39:99:0,117,1742	0/0:32,0:32:96.33:0,96,1469	0/0:18,0:18:48.16:0,48,734	0/0:28,0:28:81.24:0,81,1197	0/0:22,0:22:66.22:0,66,1010	0/0:25,0:25:72.16:0,72,1011	0/0:23,0:23:66.17:0,66,926	0/0:9,0:9:27.09:0,27,400
chr10	82375842	.	G	GTTGTTTGT	9780.93	PASS	AB=0.615;AC=45;AF=0.804;AN=56;BaseQRankSum=8.059;DP=845;FS=1.244;HRun=0;HaplotypeScore=229.1509;InbreedingCoeff=0.3736;MQ=71.98;MQ0=17;MQRankSum=2.483;QD=13.55;ReadPosRankSum=5.102;VQSLOD=3.5512;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:87.16:0,87,1880	1/1:9,0:18:23.46:181,23,0	0/0:42,0:33:12.04:0,12,275	0/0:39,0:32:21.54:0,22,378	0/1:10,0:24:30.43:405,0,30	1/1:14,0:36:53.85:509,54,0	0/1:10,0:24:39.87:221,0,40	1/1:24,0:27:15.03:198,15,0	1/1:16,0:31:38.91:315,39,0	1/1:21,0:39:56.99:649,57,0	1/1:7,0:24:44.88:409,45,0	0/1:7,0:22:37.68:236,0,38	1/1:10,0:26:42.35:338,42,0	1/1:11,0:25:35.95:337,36,0	1/1:10,0:22:26.96:220,27,0	1/1:15,0:28:32.93:270,33,0	1/1:17,0:43:2.46:587,2,0	1/1:7,0:28:44.90:405,45,0	1/1:22,0:27:25.80:233,26,0	0/1:8,0:23:16.91:295,0,17	1/1:8,0:22:29.94:245,30,0	1/1:12,0:29:50.86:361,51,0	1/1:3,0:17:35.94:294,36,0	1/1:13,0:39:62.62:501,63,0	0/1:16,0:42:24.50:361,0,24	1/1:16,15:35:51.14:1600,51,0	1/1:19,0:44:59.88:489,60,0	1/1:9,2:10:3.01:123,3,0
chr10	82376285	.	T	TC	20033.48	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=6.056;DP=648;FS=1.021;HRun=1;HaplotypeScore=113.9318;InbreedingCoeff=0.9806;MQ=90.43;MQ0=0;MQRankSum=-5.017;QD=43.36;ReadPosRankSum=6.558;VQSLOD=3.8180;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.26:0,96,1270	1/1:1,5:6:9.03:144,9,0	0/0:33,0:33:99:0,99,1361	0/0:19,0:19:54.18:0,54,740	1/1:1,13:14:39.13:622,39,0	1/1:0,22:22:57.19:911,57,0	0/0:27,0:27:81.27:0,81,1133	0/0:22,0:22:66.21:0,66,907	1/1:3,30:33:84.29:1343,84,0	1/1:0,19:19:50.67:815,51,0	1/1:0,11:11:30.10:480,30,0	1/1:0,30:30:87.30:1391,87,0	1/1:2,20:22:60.20:957,60,0	1/1:0,35:35:99:1583,99,0	1/1:1,26:27:75.26:1199,75,0	1/1:0,24:24:69.24:1103,69,0	1/1:0,31:31:81.28:1295,81,0	1/1:2,19:21:60.20:959,60,0	0/0:21,0:21:63.21:0,63,871	0/0:14,0:14:42.14:0,42,588	1/1:3,60:63:99:2686,169,0	1/1:0,16:16:48.16:767,48,0	1/1:3,14:17:39.13:623,39,0	1/1:2,30:31:84.29:1343,84,0	1/1:0,16:16:48.16:767,48,0	1/1:1,19:20:57.19:902,57,0	0/0:17,0:17:51.15:0,51,695	1/1:0,3:3:9.03:144,9,0
chr10	82378489	.	ACCACGACAC	A	9411.70	PASS	AB=0.607;AC=15;AF=0.268;AN=56;BaseQRankSum=15.463;DP=779;FS=0.375;HRun=0;HaplotypeScore=231.7491;InbreedingCoeff=0.8961;MQ=81.69;MQ0=0;MQRankSum=-14.682;QD=46.14;ReadPosRankSum=-1.620;VQSLOD=4.2804;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,20:42:63.22:1771,63,0	0/0:7,0:7:18.06:0,18,821	0/0:35,0:35:81.26:0,81,2928	0/0:31,0:31:72.24:0,72,2500	0/0:21,0:21:45.15:0,45,2014	0/0:17,0:17:48.16:0,48,2195	1/1:10,21:31:51.17:1424,51,0	1/1:12,10:22:27.09:699,27,0	0/0:32,0:32:81.26:0,81,3627	0/0:34,0:35:99:0,99,4064	0/0:21,0:21:48.16:0,48,2056	0/0:27,0:27:69.24:0,69,3140	0/0:34,0:34:84.25:0,84,3658	0/0:29,0:29:81.26:0,81,3339	0/0:38,0:38:99:0,102,4333	0/0:22,0:22:63.22:0,63,2918	0/0:42,0:42:99:0,114,5252	0/0:29,0:29:78.27:0,78,3504	1/1:15,3:18:21.04:424,21,0	1/1:6,16:22:42.11:1135,42,0	0/0:54,0:53:99:0,150,6843	0/0:19,0:19:51.17:0,51,2173	0/0:18,0:18:51.15:0,51,1940	0/0:43,0:43:99:0,108,4779	0/0:21,0:21:63.22:0,63,2786	0/1:13,24:37:33.89:1910,0,34	1/1:3,23:26:63.22:1790,63,0	1/1:3,3:6:9.03:260,9,0
chr10	82379637	.	CAATCA	C	13544.85	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=17.083;DP=545;FS=5.552;HRun=0;HaplotypeScore=154.6469;InbreedingCoeff=0.9676;MQ=85.50;MQ0=0;MQRankSum=-16.568;QD=40.92;ReadPosRankSum=3.651;VQSLOD=4.6507;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.32:0,93,2772	1/1:0,10:10:17.89:368,18,0	0/0:28,0:28:72.20:0,72,1902	0/0:18,0:18:48.08:0,48,1299	1/1:4,25:29:42.14:845,42,0	1/1:2,16:18:45.15:915,45,0	0/0:18,0:18:51.18:0,51,1511	0/0:33,0:33:87.29:0,87,2561	1/1:2,17:19:36.12:736,36,0	1/1:3,23:26:66.22:1307,66,0	1/1:2,22:24:45.15:902,45,0	1/1:0,13:12:33.11:676,33,0	1/1:4,15:19:36.12:737,36,0	1/1:1,14:15:42.14:861,42,0	1/1:3,18:21:51.17:1037,51,0	1/1:3,16:19:39.13:799,39,0	1/1:0,18:18:36.12:719,36,0	1/1:3,16:19:33.11:675,33,0	0/0:12,0:12:24.08:0,24,659	0/0:21,0:21:54.19:0,54,1648	1/1:4,9:13:7.26:181,7,0	1/1:1,21:22:54.18:1094,54,0	1/1:1,21:22:42.14:850,42,0	1/1:1,7:8:5.05:112,5,0	1/1:0,16:16:36.12:730,36,0	0/0:17,0:17:51.18:0,51,1558	0/0:27,0:27:75.26:0,75,2240	0/0:9,0:9:27.09:0,27,823
chr10	82379772	.	TG	T	13023.76	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=11.896;DP=626;FS=2.152;HRun=3;HaplotypeScore=123.7196;InbreedingCoeff=0.9974;MQ=84.63;MQ0=0;MQRankSum=-2.858;QD=33.65;ReadPosRankSum=4.048;VQSLOD=4.2264;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,1771	1/1:1,6:7:18.06:222,18,0	0/0:21,0:21:63.07:0,63,825	0/0:20,0:20:47.99:0,48,573	1/1:3,22:25:72.20:866,72,0	1/1:0,26:26:72.18:875,72,0	0/0:27,0:27:81.26:0,81,1148	0/0:25,0:25:75.25:0,75,1064	1/1:2,31:33:90.28:1115,90,0	1/1:2,19:21:60.09:711,60,0	1/1:6,13:19:51.14:613,51,0	1/1:0,10:10:21.07:260,21,0	1/1:1,16:17:48.15:594,48,0	1/1:0,23:23:66.21:817,66,0	1/1:0,19:19:57.18:706,57,0	1/1:1,19:20:57.18:706,57,0	1/1:0,41:41:99:1487,120,0	1/1:1,12:13:36.11:446,36,0	0/0:20,0:20:51.17:0,51,730	0/0:22,0:22:66.22:0,66,940	1/1:0,26:26:69.17:838,69,0	1/1:3,15:19:51.16:631,51,0	1/1:5,26:31:72.14:871,72,0	1/1:0,14:14:39.12:483,39,0	1/1:1,22:23:63.20:781,63,0	0/0:19,1:20:19.98:0,20,721	0/0:26,0:26:75.22:0,75,1039	0/0:15,0:15:45.09:0,45,589
chr10	82383406	.	A	ATGTG	25228.29	PASS	AB=0.784;AC=48;AF=0.857;AN=56;BaseQRankSum=-9.271;DP=563;FS=2.716;HRun=0;HaplotypeScore=84.0187;InbreedingCoeff=0.7138;MQ=65.65;MQ0=0;MQRankSum=-0.943;QD=49.86;ReadPosRankSum=3.486;VQSLOD=5.6357;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,18:29:6.15:907,0,6	1/1:1,3:5:9.03:225,9,0	0/0:18,0:18:42.11:0,42,596	0/0:14,0:11:14.28:0,14,192	1/1:2,19:21:45.15:1124,45,0	1/1:5,13:19:27.09:674,27,0	1/1:3,8:11:27.09:669,27,0	1/1:17,19:38:83.94:1494,84,0	1/1:3,11:14:36.12:898,36,0	1/1:7,15:23:51.15:1151,51,0	1/1:1,31:32:87.30:2172,87,0	1/1:1,12:13:21.07:524,21,0	1/1:7,16:24:54.19:1301,54,0	1/1:4,11:16:32.90:761,33,0	1/1:1,11:15:27.09:674,27,0	1/1:6,17:23:48.16:1195,48,0	1/1:4,19:24:39.94:1196,40,0	1/1:4,32:37:93.32:2322,93,0	1/1:6,10:16:36.10:780,36,0	1/1:7,32:42:93.11:2260,93,0	1/1:3,9:12:24.08:599,24,0	1/1:1,7:8:15.05:375,15,0	1/1:0,16:17:47.95:1136,48,0	1/1:5,10:14:23.93:599,24,0	1/1:4,15:21:41.93:986,42,0	0/0:24,0:24:66:0,66,1034	1/1:3,16:22:48.16:1194,48,0	0/1:7,0:7:13.09:13,0,189
chr10	82385744	.	TCATAA	T	5339.44	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.754;DP=650;FS=0.000;HRun=0;HaplotypeScore=163.9510;InbreedingCoeff=0.9809;MQ=57.76;MQ0=4;MQRankSum=-15.779;QD=29.34;ReadPosRankSum=1.296;VQSLOD=4.3162;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,1:32:20.98:897,21,0	0/0:10,0:10:27.09:0,27,780	0/0:26,0:18:51.17:0,51,1426	0/0:16,0:8:24.07:0,24,650	0/0:24,0:24:72.24:0,72,2144	0/0:17,0:17:51.17:0,51,1528	1/1:15,3:18:30.04:375,30,0	1/1:24,2:24:51.17:806,51,0	0/0:23,0:23:66.20:0,66,1926	0/0:24,0:24:69.22:0,69,1978	0/0:21,0:21:63.22:0,63,1966	0/0:20,0:20:60.21:0,60,1877	0/0:31,0:31:87.27:0,87,2532	0/0:37,0:37:99:0,111,3386	0/0:25,0:25:75.26:0,75,2173	0/0:21,0:21:54.19:0,54,1547	0/0:28,0:28:81.28:0,81,2501	0/0:23,0:23:69.19:0,69,1933	1/1:12,0:11:27.09:401,27,0	1/1:35,6:41:89.77:1261,90,0	0/0:16,0:16:48.16:0,48,1361	0/0:25,0:25:69.24:0,69,2061	0/0:15,0:15:45.15:0,45,1409	0/0:30,0:30:84.27:0,84,2556	0/0:35,0:35:99:0,102,3182	1/1:15,1:16:42.14:611,42,0	1/1:27,3:30:63.18:907,63,0	1/1:7,0:7:6.02:81,6,0
chr10	82385751	.	ATG	A	6056.17	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=18.039;DP=628;FS=2.934;HRun=0;HaplotypeScore=127.9614;InbreedingCoeff=0.9398;MQ=61.84;MQ0=0;MQRankSum=-17.063;QD=34.41;ReadPosRankSum=-0.739;VQSLOD=6.6775;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,28:32:43.67:1110,44,0	0/0:10,0:10:30.10:0,30,527	0/0:25,0:19:54.15:0,54,961	0/1:11,0:10:3.02:3,0,339	0/0:23,0:23:69.24:0,69,1301	0/0:19,0:19:57.20:0,57,1063	1/1:3,9:12:29.94:408,30,0	1/1:5,18:21:52.87:811,53,0	0/0:22,0:22:66.23:0,66,1211	0/0:22,0:22:66.21:0,66,1217	0/0:26,0:26:78.27:0,78,1451	0/0:22,0:22:66.23:0,66,1235	0/0:30,0:30:87.30:0,87,1629	0/0:37,0:37:99:0,111,2067	0/0:24,0:24:72.23:0,72,1294	0/0:18,0:18:54.12:0,54,941	0/0:35,0:35:99:0,105,1938	0/0:21,0:21:63.19:0,63,1115	1/1:2,9:10:28.91:444,29,0	1/1:6,29:35:99:1387,102,0	0/0:14,0:14:42.14:0,42,782	0/0:24,0:24:72.25:0,72,1322	0/0:15,0:15:45.15:0,45,846	0/0:29,0:29:87.30:0,87,1624	0/0:36,0:36:99:0,108,2026	1/1:4,13:17:39.28:675,39,0	1/1:6,24:30:80.69:1073,81,0	1/1:0,5:5:14.73:144,15,0
chr10	82385757	.	A	AAAT	7336.47	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=12.521;DP=650;FS=7.631;HRun=0;HaplotypeScore=149.5185;InbreedingCoeff=0.9129;MQ=63.89;MQ0=0;MQRankSum=-14.863;QD=35.79;ReadPosRankSum=-3.650;VQSLOD=4.3267;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:33,2:35:57.98:1132,58,0	0/0:9,0:9:27.09:0,27,444	0/0:21,0:20:45.72:0,46,768	0/1:12,0:11:26.64:27,0,224	0/0:28,0:28:75.22:0,75,1124	0/0:20,0:20:54.18:0,54,882	1/1:16,0:16:36.09:491,36,0	1/1:26,3:27:78.18:1248,78,0	0/0:20,0:20:51.16:0,51,797	0/0:23,0:23:66.22:0,66,1034	0/0:25,0:25:72.25:0,72,1181	0/0:24,0:24:72.19:0,72,1070	0/0:30,0:30:84.27:0,84,1348	0/0:35,0:35:96.33:0,96,1573	0/0:22,0:22:57.18:0,57,893	0/0:18,0:18:51.16:0,51,789	0/0:36,0:36:99:0,108,1632	0/0:19,0:19:51.16:0,51,820	1/1:12,2:13:39.12:602,39,0	1/1:37,0:38:99:1314,99,0	0/0:14,0:14:39.59:0,40,623	0/0:24,0:24:69.19:0,69,1040	0/0:14,0:14:42.14:0,42,695	0/0:27,0:27:81.28:0,81,1329	0/0:36,0:36:99:0,102,1663	1/1:15,7:23:66.19:1032,66,0	1/1:29,2:32:81.24:1247,81,0	1/1:6,0:6:15.05:243,15,0
chr10	82386179	.	TAA	T	11527.58	PASS	AB=0.586;AC=35;AF=0.625;AN=56;BaseQRankSum=-14.031;DP=663;FS=8.541;HRun=9;HaplotypeScore=133.5325;InbreedingCoeff=0.9227;MQ=66.49;MQ0=6;MQRankSum=5.619;QD=25.90;ReadPosRankSum=8.263;VQSLOD=2.8085;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81:0,81,1254	1/1:3,10:13:30.08:348,30,0	0/0:16,0:12:33.11:0,33,511	0/0:12,0:9:24.05:0,24,354	1/1:5,29:32:72.20:839,72,0	1/1:3,21:24:57.16:664,57,0	0/0:16,0:16:45.14:0,45,714	0/0:26,0:26:69.23:0,69,1102	1/1:3,25:28:69.20:804,69,0	1/1:2,28:29:84.25:978,84,0	1/1:4,21:25:57.15:664,57,0	1/1:2,21:23:57.16:664,57,0	1/1:7,32:39:87.24:1014,87,0	1/1:1,17:18:45.13:524,45,0	1/1:1,20:21:54.16:629,54,0	1/1:1,22:23:51.14:594,51,0	1/1:1,20:21:51.15:594,51,0	0/1:5,12:17:59.91:345,0,60	0/0:16,0:16:39.13:0,39,623	0/0:32,0:32:84.29:0,84,1375	1/1:3,19:22:51.14:594,51,0	1/1:2,24:26:48.10:559,48,0	1/1:3,19:21:41.35:488,41,0	1/1:2,26:27:51.14:594,51,0	1/1:5,25:30:54.15:629,54,0	0/0:6,1:30:25.44:0,25,167	0/0:32,0:32:72.25:0,72,1170	0/0:0,0:9:22.46:0,22,79
chr10	82386203	.	TGTA	T	5661.86	PASS	AB=0.717;AC=16;AF=0.286;AN=56;BaseQRankSum=16.650;DP=625;FS=3.431;HRun=0;HaplotypeScore=167.1162;InbreedingCoeff=0.8319;MQ=76.70;MQ0=3;MQRankSum=-7.977;QD=32.73;ReadPosRankSum=1.231;VQSLOD=5.3474;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:23:60.07:801,60,0	0/0:14,0:14:42.14:0,42,1006	0/0:25,0:25:71.91:0,72,1574	0/0:18,0:18:50.38:0,50,1155	0/0:29,0:28:84.29:0,84,2067	0/0:23,0:23:63.22:0,63,1548	1/1:1,15:16:48.11:616,48,0	1/1:3,17:21:63.17:721,63,0	0/0:25,0:25:72.25:0,72,1746	0/0:31,0:31:93.32:0,93,2252	0/0:23,0:23:69.24:0,69,1613	0/0:28,0:28:81.26:0,81,1896	0/0:30,0:30:83.65:0,84,1976	0/0:19,0:19:54.19:0,54,1274	0/0:20,0:20:54.19:0,54,1303	0/0:19,0:19:48.16:0,48,1156	0/0:27,0:26:78.27:0,78,1839	0/1:15,2:17:46.92:47,0,986	1/1:3,14:17:50.56:661,51,0	1/1:2,27:29:87.14:1120,87,0	0/0:26,0:25:69.24:0,69,1667	0/0:31,0:31:93.31:0,93,2181	0/0:18,0:18:51.13:0,51,1079	0/0:25,0:24:60.19:0,60,1370	0/0:21,0:21:54.19:0,54,1329	0/1:3,18:21:10.86:630,0,11	1/1:1,19:20:60.14:784,60,0	1/1:1,8:9:27.03:284,27,0
chr10	82386207	.	A	ACT	7372.53	PASS	AB=0.895;AC=17;AF=0.304;AN=56;BaseQRankSum=15.189;DP=625;FS=0.325;HRun=0;HaplotypeScore=151.2196;InbreedingCoeff=0.9094;MQ=74.71;MQ0=3;MQRankSum=-10.230;QD=38.40;ReadPosRankSum=-0.934;VQSLOD=5.8507;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,21:26:63.15:923,63,0	0/0:14,0:14:42.13:0,42,657	0/0:20,0:20:36.04:0,36,856	0/0:20,0:20:54.18:0,54,820	0/0:29,0:28:84.29:0,84,1370	0/0:22,0:22:60.20:0,60,979	1/1:3,15:18:51.16:766,51,0	1/1:12,17:29:87.29:1227,87,0	0/0:24,0:24:69.24:0,69,1123	0/0:32,0:32:90.31:0,90,1467	0/0:21,0:21:63.22:0,63,1027	0/0:27,0:27:75.26:0,75,1224	0/0:30,0:30:83.87:0,84,1327	0/0:18,0:18:51.16:0,51,805	0/0:18,0:18:48.15:0,48,759	0/0:17,0:17:42.14:0,42,685	0/0:25,0:24:72.25:0,72,1174	0/1:15,2:17:57:57,0,617	1/1:6,14:20:60.16:933,60,0	1/1:2,27:29:87.26:1277,87,0	0/0:26,0:25:69.22:0,69,1091	0/0:28,0:28:84.29:0,84,1370	0/0:17,0:17:48.15:0,48,758	0/0:23,0:22:54.18:0,54,881	0/0:22,0:22:54.16:0,54,855	1/1:2,18:20:11.23:750,11,0	1/1:1,19:20:60.19:893,60,0	1/1:5,8:13:39.13:546,39,0
chr10	82389897	.	C	CA	939.63	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.862;DP=714;FS=2.425;HRun=1;HaplotypeScore=71.2397;InbreedingCoeff=0.9912;MQ=64.20;MQ0=10;MQRankSum=0.755;QD=31.32;ReadPosRankSum=-2.193;VQSLOD=2.8634;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:65:99:0,181,2335	0/0:9,0:9:27.06:0,27,333	0/0:29,0:21:58.19:0,58,612	0/0:27,0:21:54.03:0,54,599	0/0:35,0:34:99:0,102,1324	0/0:24,0:24:69.22:0,69,895	0/0:22,0:22:57.12:0,57,680	0/0:35,0:32:96.24:0,96,1189	0/0:24,0:24:72.23:0,72,935	0/0:28,0:27:72.23:0,72,935	0/0:28,0:28:72.23:0,72,933	0/0:25,0:25:72.22:0,72,921	0/0:28,0:28:78.24:0,78,997	0/0:25,0:25:75.24:0,75,972	0/0:24,0:24:69.22:0,69,896	0/0:17,0:17:48.16:0,48,622	0/0:22,0:22:63.19:0,63,801	0/0:15,0:15:39.13:0,39,504	0/0:22,0:17:48.14:0,48,598	0/0:38,0:38:99:0,105,1355	0/0:32,0:32:87.28:0,87,1124	0/0:23,0:23:69.21:0,69,882	0/0:24,0:24:69.21:0,69,873	0/0:18,0:18:54.18:0,54,701	0/0:21,0:21:54.18:0,54,701	1/1:1,24:25:71.67:862,72,0	0/0:24,0:24:72.23:0,72,934	1/1:0,5:5:15.05:196,15,0
chr10	82395186	.	GC	G	408.90	PASS	AB=0.801;AC=2;AF=0.038;AN=52;BaseQRankSum=-2.204;DP=1337;DS;FS=7.827;HRun=2;HaplotypeScore=42.8658;InbreedingCoeff=-0.0190;MQ=17.75;MQ0=942;MQRankSum=-0.154;QD=4.26;ReadPosRankSum=0.088;VQSLOD=0.0665;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:12:33.11:0,33,494	0/0:21,0:3:9.03:0,9,135	./.	./.	0/0:47,0:9:21.07:0,21,314	0/0:52,0:16:33.11:0,33,493	0/0:102,0:10:24.08:0,24,354	0/0:55,0:9:24.08:0,24,359	0/0:28,0:15:33.07:0,33,469	0/0:140,0:10:27.09:0,27,390	0/0:43,0:7:12:0,12,155	0/0:16,0:9:12.04:0,12,180	0/0:35,0:18:30.10:0,30,449	0/0:29,0:17:33.11:0,33,493	0/0:25,0:14:27.09:0,27,404	0/0:30,0:18:36.04:0,36,489	0/0:36,0:13:33.11:0,33,494	0/0:28,0:16:42.13:0,42,603	0/0:111,0:9:27.09:0,27,404	0/0:143,0:13:24.04:0,24,334	0/0:30,0:18:42.14:0,42,620	0/0:55,0:15:33.11:0,33,491	0/0:29,0:5:9.03:0,9,135	0/0:21,0:12:27.05:0,27,379	0/0:51,0:9:21.07:0,21,309	0/1:73,9:10:14.80:320,0,15	0/0:69,0:18:36.12:0,36,538	0/1:8,6:7:26.84:177,0,27
chr10	82395876	.	T	TAAA	5937.36	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-5.980;DP=319;FS=10.365;HRun=12;HaplotypeScore=46.2067;InbreedingCoeff=0.7310;MQ=45.60;MQ0=14;MQRankSum=-1.209;QD=22.07;ReadPosRankSum=-0.189;VQSLOD=1.9106;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,2:4:8.99:130,9,0	1/1:0,1:1:3.01:55,3,0	0/0:9,0:2:6.02:0,6,67	0/0:10,0:4:5.30:0,5,66	1/1:8,16:24:31.60:472,32,0	1/1:3,7:12:29.99:448,30,0	1/1:8,4:14:23.95:306,24,0	1/1:3,8:13:29.97:382,30,0	1/1:3,4:8:15.03:225,15,0	1/1:1,10:12:27.03:383,27,0	1/1:4,6:11:6.02:110,6,0	1/1:6,2:10:23.45:261,23,0	1/1:4,4:10:8.67:153,9,0	1/1:4,3:8:9.01:133,9,0	1/1:4,4:9:9.03:165,9,0	1/1:3,2:6:9.01:133,9,0	1/1:6,7:18:30.04:442,30,0	1/1:2,8:12:17.73:263,18,0	1/1:3,6:12:28.23:328,28,0	1/1:7,6:15:18:239,18,0	1/1:4,6:10:9.03:150,9,0	1/1:4,9:14:21.07:357,21,0	1/1:6,7:9:21.07:373,21,0	0/1:1,0:1:0:0,0,0	1/1:1,4:5:9.03:165,9,0	0/0:15,0:14:29.98:0,30,336	1/1:6,10:16:14.69:263,15,0	0/0:16,0:14:42.09:0,42,460
chr10	82395998	.	C	CAA	4438.46	PASS	AB=0.591;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.642;DP=448;FS=4.004;HRun=7;HaplotypeScore=56.1629;InbreedingCoeff=0.9022;MQ=75.11;MQ0=0;MQRankSum=0.215;QD=33.37;ReadPosRankSum=-3.371;VQSLOD=4.1070;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,12:16:27.09:443,27,0	0/0:4,0:4:12.04:0,12,140	0/0:18,0:17:48.14:0,48,558	0/0:12,0:12:30.05:0,30,329	0/0:18,0:18:51.15:0,51,594	0/0:21,0:21:63.19:0,63,734	1/1:0,11:11:30.10:492,30,0	1/1:7,30:37:93.28:1490,93,0	0/0:22,0:22:57.17:0,57,663	0/0:14,0:14:33.09:0,33,385	0/0:10,0:10:21.06:0,21,245	0/0:17,0:17:45.13:0,45,524	0/0:20,0:20:54.16:0,54,626	0/0:17,0:17:42.12:0,42,489	0/0:23,0:23:63.17:0,63,724	0/0:10,0:10:24.07:0,24,280	0/0:14,0:14:36.10:0,36,419	0/0:12,0:12:36.11:0,36,420	1/1:1,15:17:44.64:694,45,0	1/1:1,14:15:36.12:591,36,0	0/0:29,0:29:75.21:0,75,874	0/0:9,0:9:21.06:0,21,245	0/0:21,0:21:57.15:0,57,653	0/0:9,0:9:24.07:0,24,279	0/0:14,0:14:39.11:0,39,455	0/1:4,0:13:9.50:54,0,9	1/1:1,17:19:39.13:640,39,0	1/1:0,0:4:9.98:35,10,0
chr10	82396911	.	TATCTCCCTAAGACC	T	9796.83	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.822;DP=613;FS=5.421;HRun=0;HaplotypeScore=235.9861;InbreedingCoeff=0.9946;MQ=94.79;MQ0=0;MQRankSum=-11.967;QD=71.51;ReadPosRankSum=-0.822;VQSLOD=4.1817;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,30:36:69.19:2570,69,0	0/0:18,0:18:54.19:0,54,3719	0/0:32,0:32:75.25:0,75,3996	0/0:29,0:29:72.22:0,72,4139	0/0:24,0:24:69.24:0,69,4676	0/0:19,0:19:54.19:0,54,3708	1/1:5,7:12:15.05:622,15,0	1/1:9,24:33:72.20:2468,72,0	0/0:23,0:23:63.21:0,63,3670	0/0:26,0:26:78.26:0,78,5132	0/0:14,0:14:42.14:0,42,2762	0/0:23,0:23:66.23:0,66,4584	0/0:21,0:21:60.21:0,60,3983	0/0:19,0:19:57.20:0,57,3729	0/0:28,0:28:81.26:0,81,4976	0/0:29,0:29:87.30:0,87,5561	0/0:16,0:16:42.13:0,42,2599	0/0:9,0:9:24.07:0,24,1482	1/1:2,6:8:18.04:378,18,0	1/1:3,15:18:42.14:1552,42,0	0/0:36,0:35:96.31:0,96,6199	0/0:22,0:22:66.21:0,66,4058	0/0:10,0:10:30.10:0,30,2080	0/0:25,0:25:66.23:0,66,4164	0/0:14,0:14:42.14:0,42,2709	0/0:18,0:18:54.19:0,54,3617	1/1:8,22:30:54.18:2206,54,0	0/0:21,0:21:63.22:0,63,4169
chr10	82398269	.	G	GGAAAAA	834.15	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.338;DP=271;FS=2.650;HRun=0;HaplotypeScore=72.0286;InbreedingCoeff=0.6714;MQ=60.55;MQ0=12;MQRankSum=-5.154;QD=46.34;ReadPosRankSum=-0.596;VQSLOD=3.1421;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.19:0,60,1252	0/0:5,0:5:12.04:0,12,263	0/0:15,0:6:8.99:0,9,134	0/0:18,0:9:21.02:0,21,414	0/0:11,0:10:24.05:0,24,419	0/0:9,0:9:24.01:0,24,435	0/0:5,0:5:12.04:0,12,262	0/0:34,0:34:83.91:0,84,1503	0/0:8,0:8:24.08:0,24,527	0/0:8,0:8:21.06:0,21,421	0/0:4,0:4:9.03:0,9,197	0/0:12,0:12:30.09:0,30,587	0/0:9,0:9:26.98:0,27,458	0/0:5,0:5:15.05:0,15,307	0/0:5,0:5:15.02:0,15,247	0/0:5,0:5:8.88:0,9,155	0/0:20,0:20:54.17:0,54,1135	0/0:14,0:14:39.07:0,39,807	0/0:11,0:11:27.01:0,27,426	0/0:3,0:3:9.03:0,9,197	0/0:5,0:5:12.04:0,12,240	0/0:1,0:1:3.01:0,3,43	0/0:6,0:6:18.04:0,18,322	0/0:3,0:3:6.02:0,6,132	0/0:5,0:5:12.04:0,12,263	1/1:4,7:13:27.08:783,27,0	0/0:11,0:10:26.95:0,27,495	1/1:2,0:2:6.02:162,6,0
chr10	82401060	.	TACAC	T	510.77	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.670;DP=783;FS=5.996;HRun=0;HaplotypeScore=141.2373;InbreedingCoeff=0.9313;MQ=47.30;MQ0=158;MQRankSum=-6.782;QD=7.98;ReadPosRankSum=-6.091;VQSLOD=0.0174;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:7,11:12:9.03:151,9,0	0/0:8,0:8:21.07:0,21,301	0/0:10,0:3:9.03:0,9,129	0/0:7,0:5:15.05:0,15,208	0/0:38,0:28:78.22:0,78,1077	0/0:39,0:34:87.28:0,87,1225	1/1:1,8:8:8.99:119,9,0	1/1:9,0:5:14.95:169,15,0	0/0:43,0:34:75.20:0,75,1016	0/0:52,0:33:96.30:0,96,1340	0/0:33,0:24:66.22:0,66,944	0/0:33,0:27:60.64:0,61,821	0/0:38,0:25:72.19:0,72,969	0/0:46,0:34:76.81:0,77,1075	0/0:34,0:27:69.22:0,69,968	0/0:44,0:36:87.28:0,87,1226	0/0:32,0:23:52.41:0,52,715	0/0:39,0:33:66.63:0,67,1095	1/1:3,0:2:5.49:24,5,0	1/1:15,0:10:22.38:106,22,0	0/0:73,0:46:99:0,111,1570	0/0:28,0:22:51.15:0,51,711	0/0:27,0:21:57.19:0,57,816	0/0:43,0:40:99:0,105,1483	0/0:15,0:13:33.11:0,33,472	0/0:21,0:16:45.15:0,45,643	1/1:10,0:9:22.85:117,23,0	0/0:16,0:15:45.15:0,45,624
chr10	82401066	.	TACAC	T	904.11	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.917;DP=819;FS=3.672;HRun=0;HaplotypeScore=149.5984;InbreedingCoeff=0.9070;MQ=47.85;MQ0=158;MQRankSum=-6.948;QD=13.10;ReadPosRankSum=-3.657;VQSLOD=2.3601;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:12:8.62:44,9,0	0/0:9,0:9:24.08:0,24,343	0/0:12,0:3:9.03:0,9,129	0/0:12,0:8:24.08:0,24,332	0/0:37,0:27:75.19:0,75,1014	0/0:40,0:35:87.28:0,87,1224	1/1:9,0:8:0.52:31,1,0	0/0:16,0:12:32.58:0,33,256	0/0:38,0:29:66.19:0,66,907	0/0:54,0:36:99:0,108,1525	0/0:34,0:25:66.17:0,66,885	0/0:33,0:27:60.67:0,61,857	0/0:36,0:23:60.15:0,60,801	0/0:48,0:36:82.16:0,82,1155	0/0:35,0:28:69.20:0,69,949	0/0:44,0:36:84.28:0,84,1202	0/0:34,0:25:62.17:0,62,837	0/0:38,0:32:75.20:0,75,1031	1/1:1,6:6:17.93:192,18,0	1/1:5,16:16:24.08:388,24,0	0/0:74,0:47:99:0,114,1588	0/0:28,0:22:60.19:0,60,837	0/0:29,0:23:63.08:0,63,869	0/0:42,0:39:99:0,102,1398	0/0:17,0:15:39.12:0,39,539	0/0:24,0:19:57.18:0,57,800	1/1:1,13:13:24.08:407,24,0	0/0:16,0:16:48.16:0,48,665
chr10	82401612	.	G	GA	1188.14	PASS	AB=0.889;AC=5;AF=0.089;AN=56;BaseQRankSum=-7.630;DP=535;FS=7.168;HRun=8;HaplotypeScore=48.6066;InbreedingCoeff=0.7102;MQ=72.72;MQ0=0;MQRankSum=-2.622;QD=22.42;ReadPosRankSum=1.790;VQSLOD=3.9463;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:75.02:0,75,686	0/0:14,0:14:39.02:0,39,357	0/0:14,0:15:10.68:0,11,235	0/0:10,0:10:14.49:0,14,117	0/0:30,0:30:74.99:0,75,677	0/0:15,0:15:45.02:0,45,412	0/0:15,0:15:39:0,39,352	0/0:28,0:28:72.02:0,72,653	0/0:14,0:14:42.02:0,42,384	0/0:20,0:20:57.02:0,57,518	0/0:24,0:24:60.03:0,60,549	0/0:19,0:19:51.03:0,51,467	0/0:19,0:19:57.02:0,57,517	0/0:20,0:20:54.03:0,54,494	0/0:21,0:21:60.01:0,60,545	0/0:10,0:10:27:0,27,242	0/0:16,0:16:45.02:0,45,412	0/1:7,1:8:10.68:11,0,156	0/0:24,0:24:60:0,60,544	0/0:26,0:26:75.03:0,75,682	0/0:16,0:16:42.02:0,42,384	0/0:19,0:19:51.02:0,51,467	0/0:18,0:18:51.03:0,51,467	0/0:8,0:8:21.01:0,21,192	0/0:20,0:20:54.02:0,54,494	1/1:5,18:23:5.24:568,5,0	0/0:32,0:32:81.03:0,81,741	1/1:0,22:22:63.19:727,63,0
chr10	82401916	.	CT	C	556.41	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.679;DP=485;FS=14.106;HRun=10;HaplotypeScore=69.4823;InbreedingCoeff=0.7657;MQ=75.46;MQ0=0;MQRankSum=0.654;QD=19.19;ReadPosRankSum=-1.981;VQSLOD=2.6644;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,1:22:31.10:0,31,570	0/0:9,0:9:27.07:0,27,299	0/0:17,0:17:14.84:0,15,231	0/0:6,0:6:12.92:0,13,135	0/0:25,0:25:66.18:0,66,730	0/0:16,0:16:48.13:0,48,531	0/0:19,1:20:22.06:0,22,464	1/1:4,25:29:74.98:651,75,0	0/0:20,0:20:54.15:0,54,597	0/0:19,0:19:39.10:0,39,426	0/0:31,0:33:89.90:0,90,949	0/0:9,1:11:6.87:0,7,286	0/0:10,0:10:27.03:0,27,285	0/0:10,0:10:24.02:0,24,252	0/0:13,0:13:18.05:0,18,199	0/0:16,1:17:19.02:0,19,425	0/0:15,1:16:18.88:0,19,406	0/0:15,0:15:15.08:0,15,374	0/0:21,2:23:14.14:0,14,599	0/0:24,0:24:53.60:0,54,561	0/0:16,0:16:45.12:0,45,497	0/0:11,0:11:21.06:0,21,232	0/0:13,2:15:7.03:0,7,299	0/0:8,0:8:18.05:0,18,199	0/0:22,0:22:60.14:0,60,649	0/0:19,1:20:31.09:0,31,564	0/0:17,1:18:19.02:0,19,417	0/0:20,0:20:51.11:0,51,547
chr10	82402013	.	C	CTGTG	2054.99	PASS	AB=0.964;AC=39;AF=0.750;AN=52;BaseQRankSum=-1.743;DP=553;FS=0.000;HRun=0;HaplotypeScore=135.4154;InbreedingCoeff=0.2846;MQ=56.97;MQ0=30;MQRankSum=-0.421;QD=5.19;ReadPosRankSum=0.114;VQSLOD=2.1757;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:15.47:0,15,140	1/1:2,0:4:10.52:135,11,0	./.	./.	1/1:15,0:15:9.01:120,9,0	0/1:18,0:16:0.55:31,0,1	0/0:17,0:17:11.45:0,11,137	1/1:26,0:26:0.47:1,0,0	1/1:20,0:21:5.98:51,6,0	1/1:20,0:19:12.60:163,13,0	1/1:13,0:13:2.99:24,3,0	1/1:12,0:12:7.56:101,8,0	1/1:10,0:10:3.01:35,3,0	1/1:14,0:13:9.01:157,9,0	0/1:20,0:21:4.61:89,0,5	1/1:6,1:14:10.06:271,10,0	1/1:22,0:22:9.03:148,9,0	0/1:24,0:25:33.09:88,0,33	1/1:13,4:20:15.24:178,15,0	0/1:15,0:13:27.73:53,0,28	1/1:36,0:32:9.89:95,10,0	1/1:10,0:10:3.01:49,3,0	1/1:12,0:13:6.02:110,6,0	0/1:18,0:18:0:0,0,0	1/1:11,2:14:6.02:127,6,0	0/0:27,0:25:24.25:0,24,185	0/1:16,1:19:39.48:173,0,39	0/1:15,0:12:0:0,0,0
chr10	82402059	.	GTGTC	G	3769.71	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-1.510;DP=520;FS=25.241;HRun=0;HaplotypeScore=126.5253;InbreedingCoeff=-0.6256;MQ=57.82;MQ0=31;MQRankSum=3.334;QD=8.77;ReadPosRankSum=0.713;VQSLOD=1.2857;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:33:96.22:314,0,96	0/1:7,0:7:28.73:85,0,29	0/0:46,0:20:50.31:0,50,452	0/0:44,0:23:51.35:0,51,499	0/1:13,0:13:44.36:72,0,44	0/1:14,0:13:39.59:72,0,40	0/1:18,0:15:99:113,0,242	1/1:14,0:12:36.01:317,36,0	0/1:24,0:24:13.78:171,0,14	0/1:21,0:19:58.09:212,0,58	0/1:13,0:13:26.99:76,0,27	0/1:12,0:12:72.51:115,0,73	1/1:9,0:9:13.55:113,14,0	0/1:11,0:10:54.51:93,0,55	0/1:15,0:15:42.89:43,0,149	0/1:16,0:15:41.14:41,0,184	0/1:16,0:14:39.30:140,0,39	0/1:19,0:18:81.03:81,0,183	0/1:18,0:15:99:106,0,182	0/1:11,0:9:70.87:85,0,71	0/1:36,0:32:93.79:259,0,94	0/1:6,0:6:30.92:52,0,31	0/1:13,0:13:47.21:95,0,47	0/1:19,0:18:24.59:115,0,25	0/1:15,0:15:4.84:106,0,5	1/1:6,20:24:65.56:691,66,0	0/1:20,0:19:99:166,0,135	0/1:7,0:5:14.13:37,0,14
chr10	82402889	.	T	TC	29296.30	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.473;DP=744;FS=2.192;HRun=2;HaplotypeScore=65.2744;InbreedingCoeff=0.9998;MQ=66.66;MQ0=0;MQRankSum=-6.684;QD=41.50;ReadPosRankSum=6.537;VQSLOD=4.2629;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,51:52:99:2178,147,0	1/1:1,21:22:54.18:809,54,0	0/0:19,0:19:54.11:0,54,658	0/0:19,0:19:50.92:0,51,605	1/1:1,24:25:75.19:1097,75,0	1/1:0,31:31:90.30:1349,90,0	1/1:0,24:24:60.20:899,60,0	1/1:3,32:35:93.27:1334,93,0	1/1:1,19:20:54.18:809,54,0	1/1:0,34:34:99:1485,99,0	1/1:4,26:30:72.24:1079,72,0	1/1:0,27:27:78.26:1169,78,0	1/1:0,17:18:54.18:801,54,0	1/1:0,22:22:57.19:854,57,0	1/1:1,34:35:99:1529,102,0	1/1:0,27:27:69.23:1035,69,0	1/1:0,23:23:63.21:944,63,0	1/1:0,18:18:51.17:764,51,0	1/1:0,17:17:48.16:719,48,0	1/1:0,32:32:96.33:1439,96,0	1/1:1,40:41:99:1709,114,0	1/1:0,32:32:90.30:1349,90,0	1/1:0,26:26:72.24:1079,72,0	1/1:0,35:35:99:1529,102,0	1/1:0,19:19:45.15:674,45,0	1/1:0,25:26:78.23:1135,78,0	1/1:0,24:24:69.23:1034,69,0	1/1:0,11:11:33.11:495,33,0
chr10	82405526	.	GAC	G	1756.66	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=5.414;DP=524;FS=0.921;HRun=0;HaplotypeScore=86.9884;InbreedingCoeff=0.8906;MQ=60.13;MQ0=18;MQRankSum=-1.636;QD=10.58;ReadPosRankSum=-1.219;VQSLOD=3.2798;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:30:32.63:246,33,0	0/0:7,0:7:10.80:0,11,99	0/1:29,0:16:16.27:16,0,290	0/0:60,0:26:20.52:0,21,333	0/0:13,0:13:26.92:0,27,214	0/0:20,0:19:38.70:0,39,352	1/1:18,1:19:33.99:261,34,0	1/1:9,19:25:66.96:535,67,0	0/0:18,0:16:22.59:0,23,296	0/0:18,0:18:48.16:0,48,420	0/0:19,0:18:40.56:0,41,306	0/0:14,0:14:38.82:0,39,305	0/0:16,0:16:44.39:0,44,345	0/0:16,0:16:41.92:0,42,345	0/0:25,0:25:65.25:0,65,493	0/0:13,0:12:35.94:0,36,296	0/0:13,0:11:29.79:0,30,222	0/0:19,0:18:44.04:0,44,356	1/1:14,0:13:35.67:273,36,0	1/1:13,0:13:23.35:172,23,0	0/0:25,0:25:49.59:0,50,396	0/0:12,0:12:29.55:0,30,216	0/0:12,0:12:26.91:0,27,212	0/0:20,0:20:56.74:0,57,503	0/0:18,0:18:47.27:0,47,374	1/1:14,0:14:31.75:257,32,0	1/1:12,0:12:23.41:157,23,0	1/1:5,0:4:5.95:43,6,0
chr10	82405548	.	A	ACAGAGG	4067.81	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-1.541;DP=575;FS=1.161;HRun=0;HaplotypeScore=137.4458;InbreedingCoeff=0.9680;MQ=61.09;MQ0=3;MQRankSum=-7.402;QD=28.85;ReadPosRankSum=-3.978;VQSLOD=2.9575;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,19:30:30.09:970,30,0	0/0:8,0:8:12.04:0,12,248	0/0:46,0:30:24.05:0,24,370	0/0:52,0:36:19.96:0,20,365	0/0:12,0:12:12.03:0,12,211	0/0:20,0:19:33.08:0,33,575	1/1:12,14:27:18.02:500,18,0	1/1:33,0:34:42.12:704,42,0	0/0:17,0:17:45.15:0,45,901	0/0:23,0:23:39.12:0,39,710	0/0:19,0:19:30.09:0,30,567	0/0:17,0:17:39.13:0,39,792	0/0:22,0:22:57.17:0,57,1106	0/0:17,0:17:42.13:0,42,798	0/0:27,0:27:60.19:0,60,1177	0/0:12,0:12:33.11:0,33,684	0/0:15,0:14:33.06:0,33,603	0/0:17,0:17:33.11:0,33,664	1/1:9,8:15:20.99:405,21,0	1/1:7,9:17:18.06:558,18,0	0/0:29,0:29:54.15:0,54,1033	0/0:11,0:11:24.07:0,24,444	0/0:10,0:10:12.01:0,12,249	0/0:22,0:22:48.15:0,48,914	0/0:17,0:17:42.13:0,42,820	0/0:6,0:15:20.73:0,21,209	1/1:4,10:15:33.10:932,33,0	0/0:1,0:5:12.01:0,12,131
chr10	82406503	.	AG	A	1969.01	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.574;DP=649;FS=0.571;HRun=1;HaplotypeScore=57.8458;InbreedingCoeff=0.9597;MQ=64.43;MQ0=0;MQRankSum=-2.100;QD=37.87;ReadPosRankSum=2.481;VQSLOD=4.1000;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.27:0,78,1246	0/0:10,0:10:30.10:0,30,479	0/0:4,0:4:12.04:0,12,188	0/0:5,0:5:9.91:0,10,109	0/0:34,0:34:99:0,102,1623	0/0:21,0:21:63.21:0,63,1007	0/0:17,0:17:51.16:0,51,790	0/0:33,0:33:99:0,99,1535	0/0:24,0:24:72.19:0,72,1096	0/0:33,0:33:96.30:0,96,1488	0/0:36,0:36:99:0,105,1561	0/0:27,0:27:78.25:0,78,1223	0/0:22,0:22:66.21:0,66,1027	0/0:20,0:20:60.18:0,60,911	0/0:32,0:32:96.30:0,96,1487	0/0:16,0:16:48.16:0,48,765	0/0:19,0:19:57.19:0,57,911	0/0:9,0:9:27.09:0,27,431	0/0:19,0:19:57.19:0,57,880	0/0:33,0:33:99:0,99,1543	0/0:11,0:11:33.11:0,33,527	0/0:24,0:24:72.23:0,72,1127	0/0:31,0:31:90.31:0,90,1433	0/0:16,0:16:45.15:0,45,717	0/0:31,0:31:93.23:0,93,1450	1/1:0,31:31:93.31:1294,93,0	0/0:44,0:44:99:0,132,2071	1/1:0,21:21:57.19:796,57,0
chr10	82407277	.	CA	C	436.92	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=15.178;DP=633;FS=0.365;HRun=11;HaplotypeScore=118.9727;InbreedingCoeff=0.2511;MQ=51.09;MQ0=16;MQRankSum=-0.643;QD=1.03;ReadPosRankSum=2.146;VQSLOD=-0.5350;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,4:48:42.36:0,42,1085	1/1:8,0:8:1.22:3,1,0	0/0:12,0:3:2.62:0,3,47	0/0:20,0:7:8.85:0,9,106	1/1:25,0:24:17.80:60,18,0	1/1:25,0:25:5.02:40,5,0	0/0:23,0:24:62.96:0,63,637	0/0:23,2:21:38.61:0,39,470	0/1:18,0:18:14.84:15,0,19	0/1:31,0:30:20.75:21,0,60	1/1:13,0:13:11.82:31,12,0	1/1:14,0:14:3.89:24,4,0	0/1:22,0:21:17.74:18,0,21	0/1:17,0:16:10.03:10,0,11	0/1:19,0:19:10.23:26,0,10	1/1:18,0:17:13.56:36,14,0	0/1:42,0:40:31.66:60,0,32	0/1:25,0:24:17.53:18,0,20	0/0:24,1:24:35.38:0,35,544	0/0:25,0:25:63.09:0,63,657	1/1:9,0:9:7.94:20,8,0	1/1:28,0:28:23.55:63,24,0	0/1:26,0:25:18.79:19,0,48	1/1:26,0:25:23.96:61,24,0	0/1:18,0:18:8.84:19,0,9	1/1:29,0:28:5.39:50,5,0	0/0:29,0:29:71.99:0,72,738	1/1:11,0:11:9.40:27,9,0
chr10	82407284	.	AAAAAG	A	4281.61	PASS	AB=0.992;AC=35;AF=0.625;AN=56;BaseQRankSum=14.556;DP=652;FS=0.351;HRun=0;HaplotypeScore=148.4479;InbreedingCoeff=0.5499;MQ=52.59;MQ0=14;MQRankSum=-0.394;QD=9.89;ReadPosRankSum=4.504;VQSLOD=3.9072;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,126,3213	1/1:6,0:6:5.90:38,6,0	0/0:17,0:5:12.03:0,12,197	0/0:20,0:7:3.21:0,3,287	1/1:24,2:25:55.85:376,56,0	1/1:23,3:26:27.68:364,28,0	0/0:26,0:26:69.19:0,69,1910	0/0:31,0:27:69.22:0,69,1641	0/1:15,0:15:23.69:142,0,24	0/1:31,0:30:7.74:343,0,8	1/1:14,0:14:35.40:222,35,0	1/1:12,1:13:30.32:217,30,0	0/1:20,0:20:0.77:134,0,1	1/1:17,0:16:16.04:104,16,0	1/1:19,1:20:9.40:238,9,0	1/1:17,0:16:35.12:213,35,0	1/1:44,0:42:19.55:421,20,0	1/1:23,0:23:2.99:152,3,0	0/0:22,0:22:60.16:0,60,1342	0/0:25,0:25:69.24:0,69,1876	1/1:11,1:12:14.77:128,15,0	1/1:29,0:29:63.88:399,64,0	0/1:23,1:23:26.61:185,0,27	1/1:27,0:26:52.95:330,53,0	1/1:23,1:24:2.60:159,3,0	0/1:31,0:30:66.79:75,0,67	0/0:31,0:30:78.24:0,78,1962	1/1:14,0:14:10.44:45,10,0
chr10	82407285	.	AAAAG	A	11621.94	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=10.330;DP=649;FS=0.733;HRun=0;HaplotypeScore=113.9614;InbreedingCoeff=0.9673;MQ=54.35;MQ0=14;MQRankSum=-0.569;QD=27.15;ReadPosRankSum=3.164;VQSLOD=4.8767;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,120,2508	1/1:1,5:6:5.98:70,6,0	0/0:17,0:5:11.95:0,12,144	0/0:23,0:10:16.83:0,17,298	1/1:4,22:25:59.95:838,60,0	1/1:5,21:26:45.15:693,45,0	0/0:27,0:27:71.94:0,72,1587	0/0:32,0:28:72.15:0,72,1348	1/1:4,11:15:13.36:476,13,0	1/1:4,26:29:72.19:1050,72,0	1/1:1,13:14:38.83:492,39,0	1/1:2,11:13:33.11:512,33,0	1/1:5,15:20:35.94:518,36,0	1/1:4,13:16:17.78:298,18,0	1/1:3,17:20:39.13:629,39,0	1/1:1,16:16:35.97:565,36,0	1/1:5,39:42:78.26:1256,78,0	1/1:4,19:23:35.99:550,36,0	0/0:21,0:21:51.14:0,51,894	0/0:25,0:25:69.21:0,69,1533	1/1:2,10:12:15.05:231,15,0	1/1:3,26:29:71.87:1003,72,0	1/1:7,16:22:35.97:532,36,0	1/1:3,24:26:54.13:893,54,0	1/1:5,19:24:26.98:395,27,0	1/1:27,1:27:40.50:365,41,0	0/0:29,0:28:75.20:0,75,1535	1/1:12,2:14:32.06:256,32,0
chr10	82407286	.	AAAG	A	7447.51	PASS	AB=0.917;AC=39;AF=0.696;AN=56;BaseQRankSum=14.536;DP=641;FS=0.708;HRun=0;HaplotypeScore=116.5535;InbreedingCoeff=0.8989;MQ=54.75;MQ0=14;MQRankSum=-2.065;QD=17.69;ReadPosRankSum=4.234;VQSLOD=4.7283;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,126,2221	1/1:6,0:6:5.97:46,6,0	0/0:17,0:5:11.39:0,11,139	0/0:24,0:11:21.35:0,21,311	1/1:25,1:25:59.81:515,60,0	1/1:26,0:26:45.01:397,45,0	0/0:27,0:27:71.57:0,72,1350	0/0:33,0:29:74.55:0,75,1196	1/1:14,1:15:16.91:260,17,0	1/1:29,0:28:33.47:569,33,0	1/1:13,1:14:38.89:337,39,0	1/1:13,0:13:32.68:274,33,0	1/1:18,1:19:15.82:319,16,0	1/1:17,0:16:12.62:151,13,0	1/1:20,0:20:18.89:321,19,0	1/1:17,0:16:35.98:310,36,0	1/1:44,0:42:48.85:637,49,0	1/1:22,1:23:15.64:302,16,0	0/0:20,0:20:57.11:0,57,1000	0/0:24,0:24:69.20:0,69,1306	1/1:11,0:11:15:132,15,0	1/1:26,1:27:71.83:616,72,0	0/1:20,2:21:4.78:282,0,5	1/1:26,0:25:53.97:476,54,0	1/1:23,1:24:27.02:256,27,0	1/1:8,20:27:64.65:803,65,0	0/0:28,0:27:81.19:0,81,1422	1/1:2,12:14:32.97:443,33,0
chr10	82408146	.	T	TG	3559.02	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-7.109;DP=582;FS=4.729;HRun=2;HaplotypeScore=58.7952;InbreedingCoeff=0.9996;MQ=89.60;MQ0=0;MQRankSum=-1.322;QD=38.27;ReadPosRankSum=-2.064;VQSLOD=3.4303;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1402	0/0:12,0:12:36.10:0,36,448	0/0:28,0:28:70.10:0,70,941	0/0:16,0:16:36.55:0,37,546	0/0:17,0:17:51.17:0,51,659	0/0:18,0:18:54.18:0,54,700	0/0:25,0:25:75.24:0,75,972	1/1:4,23:27:69.23:1026,69,0	0/0:15,0:15:45.15:0,45,581	0/0:14,0:14:42.13:0,42,538	0/0:16,0:16:48.15:0,48,609	0/0:20,0:20:60.20:0,60,779	0/0:17,0:17:51.17:0,51,662	0/0:27,0:27:78.25:0,78,1011	0/0:20,0:20:54.18:0,54,701	0/0:14,0:14:42.14:0,42,545	0/0:33,0:33:96.31:0,96,1247	0/0:24,0:24:69.20:0,69,876	1/1:2,26:28:81.25:1186,81,0	1/1:0,14:14:39.13:583,39,0	0/0:34,0:34:96.31:0,96,1246	0/0:18,0:18:51.17:0,51,662	0/0:14,0:14:42.14:0,42,545	0/0:29,0:29:78.25:0,78,1013	0/0:18,0:18:54.16:0,54,687	0/0:14,0:14:42.13:0,42,533	1/1:0,24:24:50.96:763,51,0	0/0:9,0:9:27.09:0,27,351
chr10	82410333	.	CATACACATACACAT	C	3450.12	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.577;DP=850;FS=1.404;HRun=0;HaplotypeScore=315.6462;InbreedingCoeff=0.9996;MQ=61.92;MQ0=1;MQRankSum=-6.210;QD=86.25;ReadPosRankSum=0.665;VQSLOD=2.7329;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:84.16:0,84,4166	0/0:12,0:12:33.10:0,33,1686	0/0:42,0:34:56.49:0,56,2138	0/0:44,0:37:68.77:0,69,2438	0/0:29,0:29:75.21:0,75,4021	0/0:27,0:27:75.23:0,75,3813	0/0:50,0:50:99:0,117,5890	0/0:49,0:49:95.90:0,96,4528	0/0:24,0:24:69.24:0,69,4296	0/0:32,0:32:72.22:0,72,3811	0/0:22,0:22:48.16:0,48,2814	0/0:37,0:37:99:0,99,5160	0/0:36,0:36:93.27:0,93,4939	0/0:38,0:38:99:0,99,5693	0/0:41,0:41:93.28:0,93,5242	0/0:27,0:27:72.21:0,72,3809	0/0:32,0:32:78.22:0,78,3963	0/0:20,0:20:51.17:0,51,2793	0/0:23,0:23:49.37:0,49,1944	0/0:34,0:34:78.23:0,78,3731	0/0:40,0:40:99:0,102,5177	0/0:21,0:21:57.17:0,57,2860	0/0:24,0:24:57.02:0,57,2976	0/0:15,0:15:30.10:0,30,1981	0/0:23,0:23:54.15:0,54,3031	1/1:3,23:26:63.22:2192,63,0	0/0:27,0:27:72.25:0,72,4013	1/1:1,13:14:39.13:1258,39,0
chr10	82411723	.	G	GACAACTTTC	40221.97	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=11.226;DP=676;FS=0.000;HRun=0;HaplotypeScore=289.1187;InbreedingCoeff=0.9818;MQ=67.17;MQ0=0;MQRankSum=-16.310;QD=83.28;ReadPosRankSum=-1.115;VQSLOD=4.0591;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,120,3388	1/1:2,15:17:48.14:2106,48,0	0/0:15,0:15:30.09:0,30,742	0/0:17,0:17:27.07:0,27,638	1/1:10,7:18:33.11:1104,33,0	1/1:9,8:17:36.12:1550,36,0	0/0:31,0:31:84.27:0,84,2287	0/0:35,0:35:66.22:0,66,1740	1/1:16,14:30:66.23:2950,66,0	1/1:9,17:26:69.07:3077,69,0	1/1:4,7:11:27.09:955,27,0	1/1:14,13:28:72.25:3152,72,0	1/1:12,12:25:51.16:2196,51,0	1/1:12,13:25:51.18:2161,51,0	1/1:13,19:32:81.28:3448,81,0	1/1:19,8:27:54.19:2135,54,0	1/1:16,11:27:51.18:2260,51,0	1/1:11,4:15:30.10:1305,30,0	0/0:18,0:18:42.14:0,42,1100	0/0:11,0:11:27.09:0,27,778	1/1:36,8:44:47.65:1658,48,0	1/1:16,11:28:55.43:2015,55,0	1/1:11,10:21:42.14:1469,42,0	1/1:18,8:26:33.11:1089,33,0	1/1:20,7:27:54.19:2136,54,0	1/1:19,17:36:72.20:3177,72,0	0/0:18,0:17:42.14:0,42,1195	1/1:1,2:3:6.02:279,6,0
chr10	82411744	.	TTGGCCTAA	T	25274.82	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=17.158;DP=605;FS=1.918;HRun=0;HaplotypeScore=290.2027;InbreedingCoeff=0.9894;MQ=68.31;MQ0=0;MQRankSum=-18.129;QD=61.80;ReadPosRankSum=5.557;VQSLOD=4.3772;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,157,6794	1/1:3,17:20:45.15:1264,45,0	0/0:16,0:16:43.03:0,43,1501	0/0:24,0:24:56.63:0,57,1991	1/1:2,12:14:27.09:766,27,0	1/1:2,14:16:36.12:1003,36,0	0/0:30,0:30:90.31:0,90,3886	0/0:28,0:28:81.28:0,81,3546	1/1:4,26:30:75.26:2125,75,0	1/1:6,21:27:61.26:1738,61,0	1/1:0,10:11:27.09:762,27,0	1/1:4,23:27:66.23:1825,66,0	1/1:5,13:19:36.12:1013,36,0	1/1:3,20:23:51.18:1442,51,0	1/1:4,24:28:66.22:1841,66,0	1/1:1,19:20:54.19:1521,54,0	1/1:1,21:22:48.16:1355,48,0	1/1:5,11:16:24.08:684,24,0	0/0:16,0:16:45.15:0,45,1915	0/0:10,0:10:30.10:0,30,1288	1/1:7,21:28:35.48:921,35,0	1/1:2,19:21:45.15:1278,45,0	1/1:2,15:17:36.10:1016,36,0	1/1:4,18:22:36.12:1016,36,0	1/1:1,19:20:57.13:1573,57,0	1/1:3,22:25:66.23:1876,66,0	0/0:20,0:19:60.21:0,60,2637	1/1:0,3:3:9.03:256,9,0
chr10	82413560	.	TC	T	16154.38	PASS	AB=0.875;AC=53;AF=0.946;AN=56;BaseQRankSum=2.781;DP=753;FS=4.430;HRun=3;HaplotypeScore=257.5558;InbreedingCoeff=0.3996;MQ=50.65;MQ0=0;MQRankSum=4.485;QD=21.89;ReadPosRankSum=3.696;VQSLOD=3.7487;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,17:47:99:947,113,0	1/1:16,9:25:63.99:535,64,0	0/0:15,0:10:0.62:0,1,169	0/1:18,3:14:21.24:21,0,125	1/1:16,7:23:54.64:462,55,0	1/1:16,3:19:52.93:479,53,0	1/1:21,9:30:77.32:631,77,0	1/1:14,20:32:73.91:634,74,0	1/1:20,6:26:72.95:632,73,0	1/1:22,14:36:99:979,104,0	1/1:14,7:21:52.08:448,52,0	1/1:25,8:33:88.31:817,88,0	1/1:25,4:29:80.14:744,80,0	1/1:23,9:32:84.54:734,85,0	1/1:14,8:22:57.86:534,58,0	1/1:8,6:14:37.62:336,38,0	1/1:21,9:30:74.56:620,75,0	1/1:20,9:29:79.65:624,80,0	1/1:19,12:28:68.31:602,68,0	1/1:12,7:19:42.96:354,43,0	1/1:23,8:31:66.72:658,67,0	1/1:22,10:32:72.51:669,73,0	1/1:14,8:22:57.93:481,58,0	1/1:22,10:32:77.93:712,78,0	1/1:28,7:35:91.91:858,92,0	1/1:21,6:27:77.54:777,78,0	1/1:18,7:25:69.95:584,70,0	1/1:10,2:12:32.43:282,32,0
chr10	82413565	.	C	CA	21914.36	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.466;DP=790;FS=0.996;HRun=1;HaplotypeScore=259.5265;InbreedingCoeff=0.9974;MQ=50.82;MQ0=0;MQRankSum=4.424;QD=29.14;ReadPosRankSum=4.414;VQSLOD=4.2355;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,20:49:99:1235,119,0	1/1:16,10:26:68.78:730,69,0	0/0:15,1:10:29.62:0,30,229	0/0:22,0:14:20.88:0,21,194	1/1:16,9:25:59.72:624,60,0	1/1:17,3:20:56.93:619,57,0	1/1:24,10:34:92.60:1000,93,0	1/1:15,18:31:75.07:826,75,0	1/1:22,8:30:80.89:915,81,0	1/1:29,15:44:99:1442,123,0	1/1:13,9:22:53.66:527,54,0	1/1:26,9:35:95.90:1118,96,0	1/1:26,6:32:93.04:1095,93,0	1/1:24,10:34:95.24:1044,95,0	1/1:15,8:23:59.87:668,60,0	1/1:10,6:16:47.89:531,48,0	1/1:19,9:28:74.63:772,75,0	1/1:22,10:32:86.97:887,87,0	1/1:12,11:22:59.55:647,60,0	1/1:11,6:17:44.79:468,45,0	1/1:21,7:28:62.04:709,62,0	1/1:22,12:34:80.81:903,81,0	1/1:15,7:22:59.77:617,60,0	1/1:26,9:35:90.39:957,90,0	1/1:27,9:36:96.02:1141,96,0	1/1:25,7:32:89.98:1123,90,0	1/1:20,10:30:83.91:948,84,0	1/1:10,2:12:33:368,33,0
chr10	82414284	.	C	CT	2154.36	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.313;DP=788;FS=10.648;HRun=1;HaplotypeScore=73.0286;InbreedingCoeff=0.9839;MQ=90.42;MQ0=0;MQRankSum=-2.514;QD=37.14;ReadPosRankSum=-2.871;VQSLOD=2.1004;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1410	0/0:16,0:16:42.14:0,42,543	0/0:32,0:32:84:0,84,1052	0/0:28,0:28:78.25:0,78,996	0/0:25,0:25:72.23:0,72,934	0/0:21,0:21:60.19:0,60,779	0/0:28,0:28:75.24:0,75,974	0/0:22,0:22:59.98:0,60,752	0/0:34,0:34:99:0,99,1270	0/0:42,0:42:99:0,126,1623	0/0:18,0:18:54.18:0,54,701	0/0:32,0:32:90.29:0,90,1168	0/0:25,0:25:75.24:0,75,974	0/0:26,0:26:78.25:0,78,1011	0/0:37,0:37:99:0,111,1427	0/0:29,0:29:87.26:0,87,1099	0/0:38,0:38:99:0,111,1441	0/0:20,0:20:54.18:0,54,700	0/0:34,0:34:96.30:0,96,1233	0/0:16,0:16:48.14:0,48,609	0/0:52,0:52:99:0,141,1828	0/0:16,0:16:48.16:0,48,619	0/0:23,0:23:69.22:0,69,895	0/0:30,0:30:90.27:0,90,1152	0/0:18,0:18:54.18:0,54,701	1/1:4,49:54:99:2091,120,0	0/0:30,0:30:90.29:0,90,1168	1/1:0,4:4:12.04:180,12,0
chr10	82417644	.	TA	T	529.03	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.253;DP=635;FS=8.979;HRun=6;HaplotypeScore=64.3215;InbreedingCoeff=0.9630;MQ=75.34;MQ0=0;MQRankSum=-0.932;QD=22.04;ReadPosRankSum=-0.393;VQSLOD=2.3326;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,138,1785	0/0:6,0:6:18.06:0,18,237	0/0:22,0:20:51.11:0,51,594	0/0:23,1:22:21.15:0,21,559	0/0:23,0:23:63.20:0,63,828	0/0:27,0:27:75.24:0,75,974	0/0:20,0:20:57.15:0,57,717	0/0:32,0:32:87.28:0,87,1144	0/0:22,0:22:66.21:0,66,867	0/0:23,0:23:57.16:0,57,732	0/0:25,0:25:69.22:0,69,908	0/0:26,0:26:69.22:0,69,895	0/0:28,0:28:78.25:0,78,1021	0/0:14,0:14:39.13:0,39,513	0/0:23,0:23:63.19:0,63,813	0/0:16,0:16:45.13:0,45,577	0/0:29,0:29:87.28:0,87,1140	0/0:27,0:27:69.21:0,69,890	0/0:16,0:16:48.14:0,48,616	0/0:28,0:28:81.26:0,81,1066	0/0:27,0:27:78.25:0,78,1025	0/0:20,0:20:57.16:0,57,714	0/0:19,0:19:54.13:0,54,679	0/0:22,0:22:54.18:0,54,710	0/0:21,0:21:63.18:0,63,812	1/1:4,17:21:51.13:547,51,0	0/0:21,0:21:54.18:0,54,708	1/1:0,3:3:9.02:96,9,0
chr10	82419080	.	A	ACTCTCTCTCTCTCTCT	11251.16	PASS	AB=1.000;AC=51;AF=0.981;AN=52;BaseQRankSum=-1.637;DP=624;FS=0.000;HRun=0;HaplotypeScore=267.9610;InbreedingCoeff=0.1239;MQ=64.05;MQ0=7;MQRankSum=0.620;QD=19.23;ReadPosRankSum=1.669;VQSLOD=3.4280;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:19:1.99:57,2,0	./.	1/1:24,0:12:0.47:1,0,0	./.	1/1:20,0:20:2.99:92,3,0	1/1:35,0:34:18.05:523,18,0	1/1:24,0:24:18.03:319,18,0	1/1:32,0:31:20.02:358,20,0	1/1:21,0:20:15.05:728,15,0	1/1:26,0:24:25.90:1122,26,0	0/1:24,0:24:0.17:0,0,0	1/1:17,0:16:6.02:336,6,0	1/1:21,0:20:14.83:738,15,0	1/1:13,0:13:5.91:51,6,0	1/1:23,5:32:5.65:245,6,0	1/1:22,0:21:6.02:286,6,0	1/1:7,0:7:12.04:483,12,0	1/1:15,0:14:27.05:1160,27,0	1/1:25,0:24:33.07:930,33,0	1/1:32,0:31:2.84:181,3,0	1/1:17,0:16:3.01:62,3,0	1/1:15,0:15:3:25,3,0	1/1:12,0:11:3.01:86,3,0	1/1:13,0:11:3.01:47,3,0	1/1:40,0:40:3:25,3,0	1/1:28,0:26:32.59:1447,33,0	1/1:30,0:29:31.83:1133,32,0	1/1:19,0:17:16.76:814,17,0
chr10	82420334	.	ACATCAT	A	18784.93	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=5.188;DP=721;FS=0.638;HRun=0;HaplotypeScore=200.4583;InbreedingCoeff=0.8794;MQ=64.17;MQ0=8;MQRankSum=-5.534;QD=28.94;ReadPosRankSum=7.818;VQSLOD=3.8063;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:32:21.07:414,21,0	1/1:2,8:10:18.06:360,18,0	0/0:33,0:29:29.16:0,29,999	0/0:39,0:33:64.85:0,65,1442	1/1:8,18:26:48.12:936,48,0	1/1:8,25:33:42.14:863,42,0	1/1:8,27:36:48.16:967,48,0	1/1:16,25:39:74.91:972,75,0	1/1:10,17:27:45.15:954,45,0	1/1:3,17:21:45.02:917,45,0	1/1:5,14:19:20.97:377,21,0	1/1:8,19:27:38.96:734,39,0	1/1:2,21:23:42.14:891,42,0	1/1:3,24:28:54.18:1124,54,0	1/1:7,23:30:48.11:974,48,0	1/1:6,32:37:60.21:1273,60,0	1/1:11,13:24:24.04:436,24,0	1/1:6,7:13:15.05:318,15,0	1/1:8,13:19:36.09:648,36,0	1/1:9,19:28:41.88:723,42,0	1/1:9,17:25:9.03:191,9,0	1/1:7,16:23:29.98:636,30,0	1/1:4,22:26:42.14:891,42,0	1/1:5,12:17:9.03:191,9,0	1/1:5,19:24:33.11:700,33,0	1/1:9,19:27:57.14:1090,57,0	1/1:4,21:25:51.03:1078,51,0	1/1:0,3:3:5.81:127,6,0
chr10	82422310	.	TCAATGTATGAGAGG	T	21141.52	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=16.273;DP=543;FS=9.404;HRun=0;HaplotypeScore=223.9404;InbreedingCoeff=0.9690;MQ=98.26;MQ0=0;MQRankSum=-16.877;QD=74.97;ReadPosRankSum=6.332;VQSLOD=2.9478;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,6764	1/1:1,6:7:18.06:761,18,0	0/0:35,0:35:96.33:0,96,4949	0/0:31,0:31:93.29:0,93,4916	1/1:3,19:22:27.09:1141,27,0	1/1:5,14:19:42.14:1775,42,0	0/0:18,0:18:54.19:0,54,3371	0/0:33,0:32:84.28:0,84,4652	1/1:4,14:18:39.13:1648,39,0	1/1:6,9:15:27.09:1141,27,0	1/1:2,6:8:18.06:755,18,0	1/1:3,12:15:27.56:1141,28,0	1/1:1,16:17:48.16:2029,48,0	1/1:1,14:15:39.13:1648,39,0	1/1:5,20:25:54.19:2282,54,0	1/1:3,19:22:51.18:2155,51,0	1/1:4,9:13:12.04:507,12,0	1/1:4,9:13:12.04:503,12,0	0/0:18,0:18:45.15:0,45,2989	0/0:17,0:17:45.15:0,45,3008	1/1:5,10:15:9.03:291,9,0	1/1:6,12:18:24.08:1014,24,0	1/1:1,13:14:30.10:1209,30,0	1/1:5,12:17:17.85:760,18,0	1/1:0,9:9:9.03:380,9,0	0/0:25,0:25:69.23:0,69,4390	0/0:36,0:36:99:0,108,7228	0/0:9,0:9:24.08:0,24,1552
chr10	82424133	.	A	AG	19790.42	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=15.032;DP=749;FS=0.635;HRun=0;HaplotypeScore=110.3476;InbreedingCoeff=0.9981;MQ=73.54;MQ0=0;MQRankSum=-2.107;QD=36.11;ReadPosRankSum=6.647;VQSLOD=4.0264;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1384	1/1:1,14:15:18.51:525,19,0	0/0:24,0:24:72.20:0,72,954	0/0:11,0:10:22.59:0,23,290	1/1:0,35:35:99:1324,101,0	1/1:2,32:34:87.27:1172,87,0	0/0:20,0:20:60.20:0,60,837	0/0:37,0:37:90.28:0,90,1225	1/1:1,40:41:99:1489,111,0	1/1:4,28:32:86.04:1158,86,0	1/1:0,22:22:58.45:788,58,0	1/1:0,22:22:57.19:757,57,0	1/1:0,33:33:93.30:1243,93,0	1/1:0,37:37:99:1351,102,0	1/1:0,30:30:81.26:1074,81,0	1/1:0,37:37:99:1309,99,0	1/1:0,23:23:66.21:876,66,0	1/1:1,21:22:48.63:646,49,0	0/0:23,0:23:63.21:0,63,881	0/0:23,0:23:63.21:0,63,880	1/1:2,21:23:56.36:764,56,0	1/1:0,20:20:56.93:716,57,0	1/1:1,35:36:99:1311,99,0	1/1:0,19:19:57.19:764,57,0	1/1:0,29:29:81.27:1087,81,0	1/1:0,28:28:84.23:1093,84,0	0/0:30,0:30:90.26:0,90,1218	1/1:0,10:10:27.05:342,27,0
chr10	82424648	.	A	AG	1507.17	PASS	AB=0.985;AC=28;AF=0.500;AN=56;BaseQRankSum=9.367;DP=404;FS=244.434;HRun=0;HaplotypeScore=150.6675;InbreedingCoeff=-0.4256;MQ=49.22;MQ0=19;MQRankSum=1.900;QD=4.62;ReadPosRankSum=6.054;VQSLOD=-0.2645;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:28:65.90:122,0,66	0/0:8,0:7:9.93:0,10,93	0/0:33,0:8:18.03:0,18,155	0/0:31,0:10:14.34:0,14,75	0/1:20,0:19:17.20:35,0,17	0/1:9,0:8:3.98:44,0,4	0/1:13,0:13:37.37:37,0,38	1/1:23,0:21:6.84:169,7,0	1/1:10,0:10:5.03:75,5,0	0/1:14,0:14:26.31:51,0,26	0/1:10,0:10:7.89:39,0,8	0/1:8,0:8:19.61:32,0,20	0/1:18,0:16:38.41:38,0,69	0/1:8,0:8:4.95:38,0,5	0/1:10,0:10:25.73:26,0,39	0/1:14,0:13:42.53:43,0,50	0/1:8,0:7:13.41:22,0,13	0/1:9,0:9:17.62:18,0,32	0/1:15,0:15:7.24:104,0,7	0/1:18,0:18:56.24:104,0,56	0/1:6,0:5:6.75:7,0,28	0/0:6,0:6:1.96:0,2,45	0/1:14,0:12:6.96:74,0,7	1/1:5,0:5:7.90:34,8,0	0/1:11,0:11:26.84:49,0,27	1/1:4,9:11:7.76:286,8,0	0/1:27,0:27:64.50:65,0,79	0/1:7,5:10:22.18:155,0,22
chr10	82424657	.	AT	A	5535.96	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-0.849;DP=352;FS=26.031;HRun=5;HaplotypeScore=122.8512;InbreedingCoeff=0.7853;MQ=58.09;MQ0=18;MQRankSum=-0.004;QD=21.29;ReadPosRankSum=2.142;VQSLOD=3.1859;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:24:48.05:512,48,0	1/1:2,1:3:4.52:24,5,0	0/0:36,0:11:21.13:0,21,161	0/0:33,0:11:0.36:0,0,125	1/1:1,14:15:35.80:309,36,0	1/1:7,4:10:23.95:219,24,0	1/1:3,7:10:24.05:252,24,0	1/1:5,19:22:56.94:544,57,0	1/1:1,9:10:21.06:230,21,0	1/1:5,7:12:35.90:329,36,0	1/1:4,3:7:14.92:124,15,0	1/1:0,7:7:18.05:196,18,0	1/1:3,9:11:24.06:263,24,0	1/1:0,7:7:21.02:216,21,0	1/1:1,8:9:12.03:133,12,0	1/1:4,4:7:17.96:170,18,0	1/1:7,3:9:23.96:215,24,0	1/1:0,8:8:11.99:119,12,0	1/1:9,6:15:30:299,30,0	1/1:5,5:10:24:235,24,0	1/1:2,3:4:2.97:34,3,0	1/1:0,5:5:11.84:87,12,0	1/1:1,12:12:30.08:327,30,0	1/1:0,4:4:9.02:98,9,0	1/1:3,4:7:17.99:169,18,0	0/0:13,0:11:13.25:0,13,249	1/1:0,22:22:41.99:429,42,0	0/0:10,0:8:20.93:0,21,175
chr10	82424926	.	C	CA	489.61	PASS	AB=0.860;AC=6;AF=0.107;AN=56;BaseQRankSum=-1.840;DP=589;FS=9.840;HRun=12;HaplotypeScore=81.5242;InbreedingCoeff=0.2633;MQ=69.14;MQ0=0;MQRankSum=0.320;QD=6.20;ReadPosRankSum=-1.809;VQSLOD=1.3063;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:55.60:0,56,400	0/1:7,1:8:11.28:11,0,92	0/1:21,0:18:26.15:26,0,62	0/1:13,0:12:25.58:26,0,57	0/0:26,0:26:41.66:0,42,302	0/0:22,0:23:40.67:0,41,290	0/0:17,0:17:49.76:0,50,356	0/0:47,0:49:99:0,114,818	0/0:14,0:14:35.58:0,36,251	0/0:24,0:23:38.62:0,39,284	0/0:19,0:19:41.64:0,42,305	0/0:25,0:26:55.60:0,56,398	0/0:24,0:24:38.63:0,39,282	0/0:25,1:26:21.36:0,21,320	0/0:21,1:24:7.65:0,8,344	0/0:20,1:22:17.49:0,17,279	0/0:24,0:24:62.60:0,63,459	0/0:11,0:11:20.83:0,21,153	0/0:14,0:14:26.75:0,27,193	0/0:26,0:26:47.59:0,48,348	0/0:20,0:20:35.68:0,36,262	0/0:13,0:13:23.83:0,24,173	0/0:18,0:19:31.71:0,32,223	0/0:14,0:16:30.83:0,31,209	0/0:15,0:17:22.79:0,23,159	1/1:4,15:20:19.93:325,20,0	0/0:28,1:29:23.09:0,23,376	0/1:3,13:16:10.77:230,0,11
chr10	82425997	.	A	AC	12561.96	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-3.905;DP=495;FS=10.297;HRun=5;HaplotypeScore=91.7838;InbreedingCoeff=0.7282;MQ=81.87;MQ0=2;MQRankSum=-8.741;QD=26.67;ReadPosRankSum=1.658;VQSLOD=4.0678;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,45:50:99:1500,114,0	1/1:0,8:8:8.88:118,9,0	0/1:24,0:23:2.13:2,0,319	0/0:23,0:23:54.14:0,54,603	1/1:10,5:15:32.98:314,33,0	1/1:11,12:22:53.65:663,54,0	1/1:0,25:25:54.18:711,54,0	1/1:4,7:12:20.94:205,21,0	1/1:3,8:11:27.09:355,27,0	1/1:11,12:23:59.03:732,59,0	1/1:2,2:4:9.02:103,9,0	1/1:13,9:22:57.10:700,57,0	1/1:7,8:15:36.11:458,36,0	1/1:10,6:16:39.10:478,39,0	1/1:4,5:9:24.08:310,24,0	1/1:7,5:12:25.29:288,25,0	1/1:9,10:19:42.02:468,42,0	1/1:4,10:13:36.12:472,36,0	1/1:1,19:20:57.12:700,57,0	1/1:3,14:17:29.97:336,30,0	1/1:13,9:22:39.11:497,39,0	1/1:7,2:9:21:228,21,0	1/1:3,6:9:11.71:135,12,0	1/1:8,9:17:39.02:442,39,0	1/1:7,9:16:30.05:369,30,0	1/1:5,17:22:57.18:732,57,0	1/1:1,24:25:69.22:908,69,0	1/1:8,3:11:30:339,30,0
chr10	82426008	.	T	TGG	5326.10	PASS	AB=0.895;AC=39;AF=0.696;AN=56;BaseQRankSum=0.423;DP=527;FS=10.214;HRun=8;HaplotypeScore=126.9335;InbreedingCoeff=0.8291;MQ=82.05;MQ0=4;MQRankSum=-7.300;QD=16.04;ReadPosRankSum=-3.170;VQSLOD=1.3745;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,123,1329	1/1:5,0:5:6:51,6,0	0/0:23,0:21:12.16:0,12,304	0/0:28,0:27:6.05:0,6,361	0/1:15,1:17:10.49:99,0,10	1/1:16,0:24:39.10:188,39,0	0/0:20,0:20:51.11:0,51,555	0/0:15,0:15:5.99:0,6,67	1/1:2,10:14:17.55:246,18,0	1/1:12,12:25:45.94:643,46,0	1/1:11,1:13:11.87:129,12,0	1/1:5,19:23:33.07:493,33,0	1/1:6,7:13:18.06:285,18,0	1/1:4,9:14:34.36:520,34,0	1/1:6,9:16:17.90:233,18,0	1/1:1,10:12:21.07:326,21,0	1/1:11,10:24:25.79:320,26,0	1/1:6,9:17:30.02:401,30,0	0/0:22,0:22:41.80:0,42,428	0/0:11,0:11:24.03:0,24,255	1/1:10,13:24:17.96:205,18,0	1/1:2,8:11:6.02:95,6,0	1/1:4,7:13:14.35:226,14,0	1/1:6,13:20:33.03:471,33,0	1/1:7,8:16:12.04:175,12,0	1/1:8,1:18:23.07:119,23,0	0/0:26,0:26:59.61:0,60,664	1/1:6,0:10:18.93:100,19,0
chr10	82427078	.	TACACACACACACACACACACAC	T	1872.72	PASS	AB=0.874;AC=22;AF=0.423;AN=52;BaseQRankSum=5.334;DP=601;FS=8.369;HRun=0;HaplotypeScore=300.7476;InbreedingCoeff=-0.1187;MQ=73.03;MQ0=16;MQRankSum=-2.835;QD=5.23;ReadPosRankSum=1.056;VQSLOD=1.2173;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:27.09:0,27,960	1/1:5,4:9:3.01:172,3,0	./.	./.	0/0:17,5:21:6.02:0,6,76	0/1:12,9:20:17.96:146,0,18	0/0:16,0:15:12.04:0,12,250	0/0:16,0:16:15.05:0,15,220	1/1:15,0:15:6.02:102,6,0	0/1:26,0:25:36.18:36,0,94	0/0:7,2:9:2.98:0,3,21	0/1:21,0:21:12.77:13,0,13	0/1:18,10:28:49.93:163,0,50	0/1:15,0:14:12.15:12,0,54	0/1:22,11:31:34.85:35,0,120	0/1:19,0:18:36.49:152,0,36	0/1:19,11:30:54.35:188,0,54	0/1:18,0:17:45.32:45,0,58	0/0:13,0:13:7.27:0,7,258	0/0:16,0:16:15.52:0,16,631	0/0:31,0:30:15.51:0,16,215	1/1:11,8:18:2.60:106,3,0	0/1:13,0:13:23.57:86,0,24	1/1:26,0:26:4.09:309,4,0	0/1:16,0:14:9.12:9,0,31	0/1:10,0:40:99:148,0,209	0/0:16,0:16:6.49:0,6,200	1/1:5,0:8:6.02:307,6,0
chr10	82427795	.	C	CA	17499.88	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-13.294;DP=572;FS=17.816;HRun=0;HaplotypeScore=60.3508;InbreedingCoeff=0.9993;MQ=87.94;MQ0=0;MQRankSum=-3.365;QD=42.68;ReadPosRankSum=3.319;VQSLOD=3.2159;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.29:0,93,1280	1/1:2,8:10:30.10:461,30,0	0/0:26,0:26:72.97:0,73,969	0/0:14,0:14:38.83:0,39,468	1/1:1,9:10:24.08:383,24,0	1/1:1,13:14:34.71:573,35,0	0/0:18,0:18:54.18:0,54,755	0/0:19,0:19:51.16:0,51,685	1/1:0,20:20:60.20:959,60,0	1/1:3,21:24:63.17:914,63,0	1/1:1,13:14:33.11:526,33,0	1/1:0,23:24:66.22:1039,66,0	1/1:0,19:19:54.18:862,54,0	1/1:0,12:12:30.10:479,30,0	1/1:0,26:26:75.26:1198,75,0	1/1:0,26:26:72.25:1151,72,0	1/1:0,34:34:99:1581,99,0	1/1:0,28:28:78.27:1246,78,0	0/0:15,0:15:45.15:0,45,627	0/0:11,0:11:33.11:0,33,461	1/1:0,22:22:60.20:958,60,0	1/1:1,20:21:50.88:814,51,0	1/1:0,11:11:30.10:479,30,0	1/1:0,31:31:81.28:1283,81,0	1/1:0,23:24:57.19:910,57,0	1/1:1,22:23:63.12:946,63,0	0/0:27,0:27:78.25:0,78,1068	1/1:1,16:17:48.10:737,48,0
chr10	82428619	.	AT	A	17402.99	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=16.474;DP=796;FS=9.000;HRun=3;HaplotypeScore=93.2932;InbreedingCoeff=0.9998;MQ=86.31;MQ0=0;MQRankSum=-3.396;QD=34.26;ReadPosRankSum=3.848;VQSLOD=4.9256;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1600	1/1:0,11:11:27.08:335,27,0	0/0:29,0:29:84.23:0,84,1168	0/0:22,0:22:63.13:0,63,831	1/1:1,21:22:63.20:781,63,0	1/1:1,35:36:99:1227,99,0	0/0:23,0:23:69.21:0,69,959	0/0:28,0:28:78.26:0,78,1123	1/1:0,20:20:54.17:669,54,0	1/1:1,29:30:81.25:1003,81,0	1/1:0,26:26:69.22:856,69,0	1/1:4,28:32:81.25:1004,81,0	1/1:1,42:43:99:1560,126,0	1/1:0,26:26:75.24:930,75,0	1/1:1,39:40:99:1339,108,0	1/1:0,28:28:84.26:1041,84,0	1/1:0,22:22:60.19:744,60,0	1/1:1,19:20:57.18:706,57,0	0/0:19,0:19:54.17:0,54,759	0/0:30,0:30:87.29:0,87,1252	1/1:0,43:43:99:1525,123,0	1/1:1,26:27:72.23:893,72,0	1/1:2,27:29:81.25:1004,81,0	1/1:0,29:29:78.25:967,78,0	1/1:0,24:24:66.21:818,66,0	0/0:34,0:34:99:0,102,1453	0/0:41,0:41:99:0,117,1685	0/0:23,0:23:69.21:0,69,974
chr10	82429884	.	C	CT	12508.35	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=10.332;DP=603;FS=8.213;HRun=7;HaplotypeScore=96.5217;InbreedingCoeff=0.9990;MQ=81.01;MQ0=0;MQRankSum=-3.313;QD=30.07;ReadPosRankSum=4.236;VQSLOD=4.4682;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:51.07:0,51,492	1/1:0,8:8:24.07:290,24,0	0/0:18,0:19:38.10:0,38,357	0/0:14,0:14:32.95:0,33,305	1/1:2,30:33:81.05:936,81,0	1/1:3,20:23:54.17:652,54,0	0/0:14,0:14:42.05:0,42,400	0/0:39,0:39:96.12:0,96,920	1/1:1,16:17:48.15:578,48,0	1/1:3,19:22:60.16:700,60,0	1/1:2,25:27:72.22:870,72,0	1/1:2,12:14:27.08:326,27,0	1/1:1,20:21:60.18:725,60,0	1/1:2,18:20:42.13:504,42,0	1/1:3,25:28:66.20:797,66,0	1/1:0,20:20:54.17:652,54,0	1/1:2,20:22:54.17:652,54,0	1/1:3,9:12:27.08:326,27,0	0/0:29,0:29:75.11:0,75,720	0/0:28,0:28:75.12:0,75,723	1/1:4,9:13:27.08:326,27,0	1/1:3,16:19:45.14:544,45,0	1/1:0,26:26:75.15:886,75,0	1/1:1,13:14:36.11:435,36,0	1/1:5,19:24:57.04:667,57,0	1/1:3,26:29:81.17:917,81,0	0/0:23,0:23:66.09:0,66,631	1/1:2,21:23:60.18:725,60,0
chr10	82430016	.	GTGTTGT	G	8613.53	PASS	AB=0.750;AC=39;AF=0.750;AN=52;BaseQRankSum=2.331;DP=647;FS=1.787;HRun=0;HaplotypeScore=165.3568;InbreedingCoeff=0.7896;MQ=64.13;MQ0=6;MQRankSum=-8.843;QD=20.66;ReadPosRankSum=4.141;VQSLOD=4.7422;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:28:24.08:335,24,0	1/1:1,8:9:14.95:304,15,0	./.	0/0:28,0:22:3.01:0,3,46	1/1:9,10:19:26.76:453,27,0	1/1:11,17:28:36.12:729,36,0	0/0:22,0:22:30.09:0,30,711	0/0:46,0:44:42.12:0,42,843	1/1:13,14:26:39.13:790,39,0	1/1:12,9:21:27.08:466,27,0	1/1:12,7:20:14.96:241,15,0	1/1:10,11:21:27.09:547,27,0	1/1:10,8:18:18.06:365,18,0	1/1:11,9:20:15.05:304,15,0	1/1:7,12:17:30.02:564,30,0	1/1:6,18:24:36.12:729,36,0	1/1:12,5:17:13.78:302,14,0	0/1:12,6:17:48.32:170,0,48	0/0:17,0:25:27.09:0,27,665	0/0:25,0:42:60.19:0,60,1449	./.	1/1:17,8:25:5.67:406,6,0	1/1:5,12:17:13.34:301,13,0	1/1:6,8:14:3.01:60,3,0	1/1:13,17:30:30.10:608,30,0	1/1:10,1:26:45.15:647,45,0	0/0:11,0:29:38.71:0,39,902	1/1:5,0:15:21.07:293,21,0
chr10	82436225	.	CATATATATATATATATATATAT	C	3143.46	PASS	AB=0.708;AC=26;AF=0.619;AN=42;BaseQRankSum=5.472;DP=232;FS=5.909;HRun=0;HaplotypeScore=125.7392;InbreedingCoeff=0.2191;MQ=76.17;MQ0=2;MQRankSum=-3.968;QD=21.83;ReadPosRankSum=1.944;VQSLOD=1.6270;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:6.02:0,6,96	1/1:2,0:4:3.01:45,3,0	./.	0/0:9,0:7:0:0,0,0	0/1:6,3:9:36.90:224,0,37	1/1:4,2:7:9.03:294,9,0	./.	0/0:19,0:19:12.79:0,13,209	1/1:3,1:4:3.01:73,3,0	1/1:6,1:8:9.03:439,9,0	1/1:6,2:8:3.01:36,3,0	0/1:5,5:10:11.86:323,0,12	./.	1/1:7,4:11:3.01:153,3,0	1/1:5,0:7:3.01:101,3,0	./.	1/1:9,5:15:2.62:136,3,0	1/1:6,7:13:9.03:444,9,0	0/1:3,1:8:99:270,0,113	0/0:9,0:9:2.98:0,3,22	./.	./.	1/1:7,4:11:8.97:249,9,0	./.	1/1:7,1:8:8.06:212,8,0	0/0:5,0:5:3.01:0,3,210	0/1:15,0:19:9.82:278,0,10	0/0:4,0:6:9.03:0,9,461
chr10	82437411	.	TTA	T	1261.54	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=3.916;DP=344;FS=2.831;HRun=0;HaplotypeScore=54.2873;InbreedingCoeff=0.5787;MQ=75.07;MQ0=0;MQRankSum=-0.533;QD=27.42;ReadPosRankSum=2.180;VQSLOD=4.2539;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:9:2.54:0,3,103	0/0:3,0:3:6.02:0,6,98	0/0:8,0:8:11.92:0,12,123	0/0:15,0:10:17.92:0,18,201	0/0:14,1:15:2.19:0,2,535	0/0:18,1:19:17.25:0,17,790	0/0:2,0:6:12.01:0,12,106	0/0:13,0:41:24.92:0,25,686	0/0:6,0:6:15.05:0,15,242	0/0:8,0:8:15.05:0,15,245	0/0:12,0:12:24.06:0,24,367	0/0:10,0:10:24.07:0,24,363	0/0:7,0:7:21.07:0,21,338	0/0:9,0:9:18.06:0,18,294	0/0:9,0:9:18.05:0,18,270	0/0:6,0:6:9.03:0,9,147	0/0:23,0:23:54.18:0,54,874	0/0:15,0:15:36.10:0,36,561	0/0:8,0:12:10:0,10,213	0/0:3,0:7:6.58:0,7,73	0/0:5,0:5:3.01:0,3,49	./.	0/0:9,0:9:6.02:0,6,98	0/0:7,0:7:6.02:0,6,98	0/0:16,1:18:14.23:0,14,719	1/1:3,17:21:54:642,54,0	0/0:9,0:15:18:0,18,159	1/1:5,20:25:60.19:738,60,0
chr10	82438600	.	TCACA	T	4430.35	PASS	AB=0.916;AC=32;AF=0.615;AN=52;BaseQRankSum=-4.943;DP=567;FS=19.994;HRun=0;HaplotypeScore=135.0180;InbreedingCoeff=0.4795;MQ=54.66;MQ0=15;MQRankSum=2.579;QD=12.52;ReadPosRankSum=0.408;VQSLOD=3.2611;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:12.36:0,12,180	0/0:3,0:4:2.74:0,3,12	./.	./.	1/1:16,1:15:13.50:110,14,0	1/1:17,7:24:19.04:433,19,0	0/0:41,0:41:9.93:0,10,82	0/0:30,0:28:15.99:0,16,109	1/1:17,4:24:35.47:458,35,0	1/1:19,1:18:12.88:156,13,0	1/1:14,2:15:10.91:175,11,0	1/1:13,6:19:26.99:345,27,0	1/1:14,2:15:13.49:262,13,0	1/1:16,2:18:34.34:472,34,0	1/1:12,3:16:24.07:341,24,0	0/1:9,4:14:3.04:185,0,3	1/1:15,3:18:23.95:344,24,0	1/1:20,7:27:25.51:492,26,0	0/0:10,0:9:7.51:0,8,141	1/1:11,0:10:2.13:5,2,0	0/1:45,2:46:51.49:194,0,51	0/1:12,2:14:36.10:103,0,36	1/1:16,1:17:11.77:148,12,0	0/0:28,0:31:25.77:0,26,151	0/1:11,1:11:4.72:164,0,5	0/1:14,0:12:3.61:4,0,16	0/0:20,0:19:17.59:0,18,219	0/1:9,0:9:39.96:40,0,51
chr10	82438792	.	TG	T	8723.68	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=6.363;DP=533;FS=13.884;HRun=7;HaplotypeScore=60.3193;InbreedingCoeff=0.9883;MQ=92.07;MQ0=0;MQRankSum=-2.881;QD=24.85;ReadPosRankSum=5.925;VQSLOD=3.8073;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.25:0,90,1104	1/1:0,9:9:21.05:214,21,0	0/0:20,0:20:28.20:0,28,513	0/0:24,1:25:42.18:0,42,558	1/1:6,14:20:42.08:428,42,0	1/1:0,26:26:72.16:735,72,0	0/0:19,0:19:45.13:0,45,552	0/0:30,0:30:87.15:0,87,1037	1/1:2,19:21:51.12:520,51,0	1/1:2,10:12:30.06:303,30,0	1/1:3,12:15:42.07:419,42,0	1/1:3,14:17:42.09:428,42,0	1/1:2,11:13:30.07:306,30,0	1/1:0,14:14:24.05:245,24,0	1/1:2,25:27:63.14:642,63,0	1/1:0,13:13:30.07:306,30,0	1/1:1,24:25:63.79:696,64,0	1/1:2,7:9:24.05:241,24,0	0/0:10,0:10:27.09:0,27,340	0/0:23,0:23:48.12:0,48,566	1/1:4,31:35:93.21:948,93,0	1/1:2,13:15:33.07:337,33,0	1/1:2,16:18:45.10:459,45,0	1/1:1,19:20:54.12:550,54,0	1/1:6,15:21:48.10:489,48,0	1/1:4,12:16:36.07:366,36,0	0/0:22,0:22:60.16:0,60,720	1/1:0,5:5:9.02:92,9,0
chr10	82439181	.	CA	C	10051.76	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=12.056;DP=630;FS=5.089;HRun=8;HaplotypeScore=65.7158;InbreedingCoeff=0.9700;MQ=84.30;MQ0=0;MQRankSum=-0.904;QD=24.52;ReadPosRankSum=5.974;VQSLOD=5.2166;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.25:0,90,1062	1/1:1,8:9:20.98:193,21,0	0/0:23,0:23:35.80:0,36,373	0/0:18,0:20:3.12:0,3,325	1/1:2,24:26:69.03:654,69,0	1/1:1,16:17:42.07:406,42,0	0/0:24,0:24:60.18:0,60,725	0/0:40,0:40:96.29:0,96,1150	1/1:1,18:19:54.09:521,54,0	1/1:3,23:26:69.05:648,69,0	1/1:3,15:18:45.02:425,45,0	1/1:4,14:18:36.05:348,36,0	1/1:5,20:25:60.09:579,60,0	1/1:0,9:9:27.04:261,27,0	1/1:3,14:17:36.06:348,36,0	1/1:3,25:28:72.11:695,72,0	1/1:0,21:21:63.10:608,63,0	1/1:0,24:24:57.09:550,57,0	0/0:22,0:22:60.18:0,60,724	0/0:27,0:27:78.23:0,78,932	1/1:0,20:20:51.08:492,51,0	1/1:2,17:19:45.07:435,45,0	1/1:1,22:23:53.90:521,54,0	1/1:4,21:25:60.09:579,60,0	1/1:1,27:28:81.13:782,81,0	1/1:1,21:22:57.06:543,57,0	0/0:30,1:31:43.24:0,43,795	1/1:1,15:16:48.08:463,48,0
chr10	82439935	.	TACAC	T	489.49	PASS	AB=0.688;AC=5;AF=0.100;AN=50;BaseQRankSum=2.389;DP=530;FS=3.947;HRun=0;HaplotypeScore=117.0111;InbreedingCoeff=0.2318;MQ=63.32;MQ0=7;MQRankSum=0.991;QD=11.65;ReadPosRankSum=2.283;VQSLOD=3.2584;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:35:41.13:0,41,942	./.	0/0:32,0:17:3.01:0,3,65	./.	1/1:12,0:12:0.47:1,0,0	0/0:13,0:13:2.97:0,3,50	0/0:30,1:33:0.15:0,0,849	0/0:15,0:13:6.02:0,6,110	0/0:14,0:21:3.22:0,3,53	0/0:16,0:15:24.08:0,24,486	0/0:13,0:13:3.01:0,3,68	0/0:12,0:12:6.02:0,6,119	0/0:18,0:18:17.99:0,18,245	0/0:21,0:25:6.89:0,7,91	0/0:13,0:13:3.01:0,3,49	0/0:12,0:12:6.02:0,6,118	0/0:29,0:29:9.03:0,9,131	0/0:6,0:9:12.04:0,12,237	0/0:13,0:13:15.02:0,15,308	0/0:15,0:18:35.31:0,35,678	0/0:20,0:19:18.04:0,18,259	0/0:17,0:17:5.94:0,6,104	0/0:19,0:19:11.96:0,12,233	0/0:27,0:30:8.96:0,9,148	./.	0/1:12,10:22:42.35:394,0,42	0/0:17,0:18:35.81:0,36,674	1/1:1,7:8:12.04:191,12,0
chr10	82443266	.	CA	C	12332.24	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=10.820;DP=642;FS=9.828;HRun=5;HaplotypeScore=68.0460;InbreedingCoeff=0.9918;MQ=77.68;MQ0=0;MQRankSum=-0.803;QD=30.83;ReadPosRankSum=6.208;VQSLOD=4.6330;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.25:0,81,1081	1/1:0,6:6:15.04:170,15,0	0/0:22,0:22:56.81:0,57,678	0/0:9,0:9:11.21:0,11,206	1/1:2,23:25:69.16:767,69,0	1/1:0,18:18:48.14:545,48,0	0/0:35,1:36:62.28:0,62,1235	0/0:22,0:22:63.20:0,63,837	1/1:0,16:16:45.13:510,45,0	1/1:3,24:27:72.20:817,72,0	1/1:0,18:18:51.15:578,51,0	1/1:0,20:20:60.17:681,60,0	1/1:0,22:22:60.17:681,60,0	1/1:2,24:26:72.20:813,72,0	1/1:1,24:25:69.20:783,69,0	1/1:1,16:17:45.13:511,45,0	1/1:0,29:29:69.12:782,69,0	1/1:2,29:31:87.25:987,87,0	0/0:27,0:27:78.26:0,78,1067	0/0:20,0:20:57.15:0,57,758	1/1:1,13:14:36.10:408,36,0	1/1:2,31:33:90.26:1021,90,0	1/1:1,19:20:54.15:612,54,0	1/1:1,21:22:60.17:681,60,0	1/1:1,30:31:87.25:987,87,0	0/0:35,2:37:43.45:0,43,1368	0/0:31,0:31:87.25:0,87,1153	0/0:8,0:8:24.08:0,24,328
chr10	82445813	.	A	AGTGTGTGTGT	8040.33	PASS	AC=50;AF=1.000;AN=50;BaseQRankSum=-2.979;DP=617;FS=2.979;HRun=0;HaplotypeScore=230.5810;InbreedingCoeff=-0.0757;MQ=61.24;MQ0=13;MQRankSum=-0.743;QD=15.14;ReadPosRankSum=1.293;VQSLOD=3.3295;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:3.53:278,4,0	1/1:9,0:9:6.02:262,6,0	./.	./.	1/1:21,0:21:2.82:65,3,0	1/1:20,0:20:6.02:259,6,0	1/1:24,0:24:7.96:257,8,0	1/1:31,0:31:17.89:286,18,0	1/1:18,0:18:8.99:181,9,0	1/1:26,0:24:27.08:946,27,0	1/1:17,0:16:11.62:314,12,0	1/1:22,0:26:2.94:18,3,0	1/1:15,0:17:3.01:130,3,0	1/1:17,0:17:9.03:313,9,0	1/1:25,0:23:6.02:177,6,0	1/1:18,0:20:12.04:520,12,0	1/1:18,0:23:10.28:352,10,0	1/1:15,0:16:14.28:468,14,0	1/1:22,0:22:15.94:549,16,0	1/1:10,6:18:3.01:148,3,0	1/1:20,0:20:6.02:172,6,0	./.	1/1:23,0:21:12.01:300,12,0	1/1:28,0:28:2.97:20,3,0	1/1:24,0:23:2.99:118,3,0	1/1:13,0:13:21.05:746,21,0	1/1:15,3:19:15.99:618,16,0	1/1:22,0:22:14.68:542,15,0
chr10	82446188	.	TA	T	981.55	PASS	AB=0.870;AC=7;AF=0.125;AN=56;BaseQRankSum=8.091;DP=669;FS=7.282;HRun=11;HaplotypeScore=68.9000;InbreedingCoeff=0.4834;MQ=73.07;MQ0=0;MQRankSum=0.817;QD=9.44;ReadPosRankSum=1.479;VQSLOD=2.5162;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,1:25:35.18:0,35,524	0/0:14,0:14:35.92:0,36,365	0/1:17,3:20:53.76:54,0,172	0/1:10,1:11:8.17:8,0,105	0/0:27,1:28:41.49:0,41,641	0/0:24,1:27:44.92:0,45,604	0/1:19,4:23:25.80:26,0,368	0/0:28,0:28:60.13:0,60,628	0/0:34,0:34:77.24:0,77,856	0/0:20,0:20:45.16:0,45,521	0/0:16,0:16:39.08:0,39,401	0/0:23,3:26:16.87:0,17,571	0/0:24,0:24:66.17:0,66,703	0/0:20,2:22:4.83:0,5,442	0/0:43,0:43:96.16:0,96,996	0/0:24,0:24:69.15:0,69,716	0/0:21,1:23:38.47:0,38,592	0/0:18,0:18:48.10:0,48,502	0/0:16,0:18:41.87:0,42,401	0/0:35,1:37:96.04:0,96,992	0/0:10,1:11:8.44:0,8,295	0/0:24,0:24:26.80:0,27,433	0/0:18,0:18:48.09:0,48,492	0/0:21,0:21:56.95:0,57,574	0/0:27,0:27:63.15:0,63,664	1/1:5,24:29:68.89:566,69,0	0/0:34,3:36:22.33:0,22,839	1/1:1,19:20:56.92:468,57,0
chr10	82447165	.	G	GTTCC	5036.87	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=-3.042;DP=354;FS=17.137;HRun=0;HaplotypeScore=113.9186;InbreedingCoeff=0.8812;MQ=75.67;MQ0=0;MQRankSum=-7.038;QD=49.38;ReadPosRankSum=-4.379;VQSLOD=3.5677;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:7,16:23:63.04:1178,63,0	./.	0/0:21,0:21:42.14:0,42,752	0/0:15,0:16:28.60:0,29,602	0/0:5,0:5:3.01:0,3,56	0/0:9,0:9:18.06:0,18,304	1/1:8,11:19:42.14:978,42,0	1/1:10,11:21:54.18:1261,54,0	0/0:18,0:18:51.17:0,51,912	0/0:7,0:7:15.05:0,15,262	0/0:5,0:5:6.02:0,6,94	0/0:13,0:13:27.08:0,27,444	0/0:13,0:13:33.11:0,33,576	0/0:15,0:15:45.15:0,45,778	0/0:13,0:13:30.10:0,30,558	0/0:7,0:7:21.04:0,21,335	0/0:19,0:19:48.63:0,49,845	0/0:8,0:8:18.06:0,18,335	1/1:5,7:11:27.08:658,27,0	1/1:3,3:6:6.02:92,6,0	0/0:33,0:33:71.85:0,72,1259	./.	0/0:3,0:3:6.02:0,6,112	0/0:17,0:17:33.50:0,33,544	0/0:6,0:6:12.04:0,12,210	0/0:7,0:7:18.03:0,18,294	1/1:10,11:21:45.07:870,45,0	0/0:7,0:7:12.04:0,12,217
chr10	82448205	.	CACGTTCCCTT	C	2829.45	PASS	AB=0.523;AC=3;AF=0.054;AN=56;BaseQRankSum=7.817;DP=562;FS=10.136;HRun=0;HaplotypeScore=172.3319;InbreedingCoeff=0.6450;MQ=77.66;MQ0=0;MQRankSum=-7.957;QD=74.46;ReadPosRankSum=-0.163;VQSLOD=3.0087;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,5379	0/0:8,0:8:21.07:0,21,1121	0/0:20,0:20:54.16:0,54,2302	0/0:16,0:16:42.14:0,42,1837	0/0:26,0:26:78.25:0,78,3826	0/0:17,0:17:51.18:0,51,2563	0/0:20,0:20:48.16:0,48,2237	0/0:30,0:30:87.28:0,87,4184	0/0:19,0:19:51.17:0,51,2652	0/0:21,0:21:63.22:0,63,3261	0/0:15,0:15:42.14:0,42,2120	0/0:28,0:28:75.22:0,75,3622	0/0:20,0:20:57.18:0,57,2817	0/0:15,0:15:45.14:0,45,2263	0/0:23,0:23:69.23:0,69,3418	0/0:15,0:15:39.13:0,39,2082	0/0:19,0:19:57.15:0,57,2605	0/0:10,0:9:27.09:0,27,1396	0/0:22,0:20:66.23:0,66,3468	0/0:23,0:23:66.23:0,66,3397	0/0:27,0:27:75.03:0,75,3685	0/0:14,0:14:42.10:0,42,1929	0/0:19,0:19:45.15:0,45,2325	0/0:11,0:11:33.11:0,33,1654	0/0:21,0:21:63.22:0,63,3258	0/1:2,21:23:93.98:1837,0,94	0/0:26,0:26:78.27:0,78,3980	1/1:0,14:15:33.11:1099,33,0
chr10	82448259	.	CT	C	1044.51	PASS	AB=0.799;AC=10;AF=0.179;AN=56;BaseQRankSum=-8.084;DP=623;FS=12.631;HRun=15;HaplotypeScore=114.3590;InbreedingCoeff=0.0730;MQ=59.64;MQ0=12;MQRankSum=5.210;QD=3.90;ReadPosRankSum=1.249;VQSLOD=0.3429;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:33,14:49:28.79:438,29,0	0/0:4,0:5:5.80:0,6,33	0/1:40,2:14:2.07:2,0,61	0/1:51,2:23:22.71:23,0,73	0/0:35,0:34:29.33:0,29,148	0/0:13,0:15:17.23:0,17,83	0/1:3,9:12:24.05:108,0,24	0/1:15,6:21:17.99:125,0,18	0/0:18,0:18:17.67:0,18,122	0/0:10,0:33:26.30:0,26,189	0/0:27,0:25:34.92:0,35,252	0/1:19,0:19:0.94:1,0,67	0/0:19,0:19:15.77:0,16,102	0/0:19,0:19:25.56:0,26,144	0/0:22,0:22:34.89:0,35,224	0/0:12,0:13:24.47:0,24,146	0/0:19,0:20:27.66:0,28,154	0/0:12,0:10:17.61:0,18,116	0/1:14,8:22:5.38:169,0,5	0/1:8,11:19:52.68:89,0,53	0/0:8,0:13:3.31:0,3,15	0/0:15,0:15:13.87:0,14,82	0/0:8,0:19:12.22:0,12,56	0/0:12,0:11:6.64:0,7,30	0/0:20,0:20:32.41:0,32,214	0/0:18,0:17:23.92:0,24,163	0/1:21,9:31:40.60:231,0,41	0/0:17,0:19:21.64:0,22,145
chr10	82460059	.	A	AT	999.58	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.229;DP=640;FS=0.000;HRun=8;HaplotypeScore=63.3767;InbreedingCoeff=0.9613;MQ=72.61;MQ0=0;MQRankSum=-1.061;QD=24.38;ReadPosRankSum=-0.121;VQSLOD=4.1100;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,138,1251	0/0:8,0:8:18.01:0,18,165	0/0:13,0:13:23.88:0,24,197	0/0:7,0:7:8.35:0,8,76	0/0:22,0:22:57.01:0,57,518	0/0:19,0:19:57.02:0,57,517	0/0:30,0:30:56.44:0,56,679	0/0:23,0:23:51.01:0,51,467	0/0:35,0:35:96.05:0,96,879	0/0:30,0:30:78.03:0,78,714	0/0:15,0:15:36:0,36,326	0/0:24,0:24:69.04:0,69,632	0/0:18,0:18:48.02:0,48,439	0/0:15,0:15:42:0,42,379	0/0:23,0:23:54:0,54,485	0/0:25,0:25:69.02:0,69,627	0/0:41,0:41:99:0,105,940	0/0:20,0:20:41.94:0,42,371	0/0:19,0:19:42:0,42,380	0/0:24,0:24:69.02:0,69,626	0/0:20,0:20:50.99:0,51,458	0/0:27,0:27:66.02:0,66,600	0/0:17,0:17:45.02:0,45,412	0/0:13,0:13:32.99:0,33,294	0/0:32,0:32:77.97:0,78,700	1/1:4,23:27:66.17:740,66,0	0/0:28,0:28:66.01:0,66,598	1/1:3,11:14:33.10:381,33,0
chr10	82460343	.	G	GA	3761.24	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-13.520;DP=689;FS=0.370;HRun=9;HaplotypeScore=63.8477;InbreedingCoeff=0.9918;MQ=75.70;MQ0=0;MQRankSum=0.891;QD=25.24;ReadPosRankSum=-0.387;VQSLOD=4.1255;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,34:38:99:1076,99,0	0/0:12,0:12:32.99:0,33,286	0/0:17,0:17:25.95:0,26,206	0/0:11,0:11:20.03:0,20,162	0/0:43,0:43:99:0,114,985	0/0:21,0:21:44.92:0,45,391	1/1:2,13:15:33.09:365,33,0	1/1:7,17:24:48.13:530,48,0	0/0:26,0:26:62.97:0,63,547	0/0:32,1:33:47.77:0,48,640	0/0:22,0:22:59.98:0,60,521	0/0:30,0:30:65.96:0,66,573	0/0:24,0:24:59.96:0,60,516	0/0:25,0:25:62.97:0,63,547	0/0:28,0:28:71.95:0,72,621	0/0:23,0:23:62.96:0,63,544	0/0:15,1:16:11.79:0,12,326	0/0:18,0:18:53.90:0,54,455	1/1:7,15:23:27.75:500,28,0	1/1:1,23:25:45.90:692,46,0	0/0:15,0:15:38.98:0,39,339	0/0:40,2:42:74.79:0,75,878	0/0:30,0:30:74.97:0,75,650	0/0:39,0:39:99:0,102,882	0/0:18,0:19:40.98:0,41,340	0/0:24,0:24:65.98:0,66,573	1/1:3,21:24:54.15:597,54,0	0/0:21,0:21:53.97:0,54,468
chr10	82461300	.	A	ACTG	717.74	PASS	AB=0.676;AC=3;AF=0.063;AN=48;BaseQRankSum=0.453;DP=363;FS=18.481;HRun=0;HaplotypeScore=130.8938;InbreedingCoeff=-0.0981;MQ=28.60;MQ0=63;MQRankSum=-2.056;QD=17.09;ReadPosRankSum=0.398;VQSLOD=2.2788;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:10:20.34:0,20,304	0/0:6,0:5:2.38:0,2,46	./.	./.	./.	0/0:8,0:6:9.02:0,9,118	0/0:23,0:19:37.99:0,38,487	0/0:9,0:4:8.94:0,9,91	0/0:9,0:9:21.26:0,21,277	0/0:13,0:6:8.90:0,9,107	./.	0/0:13,0:9:15.25:0,15,194	0/0:8,0:8:2.59:0,3,237	0/0:11,0:9:13.36:0,13,121	0/0:9,0:6:17.75:0,18,201	0/0:8,0:7:20.98:0,21,274	0/1:5,7:11:89.89:307,0,90	0/1:9,6:13:99:371,0,146	0/0:23,0:12:26.24:0,26,261	0/0:6,0:4:2.97:0,3,20	0/0:45,6:43:27.90:0,28,492	0/0:4,0:2:3.01:0,3,37	0/0:4,0:1:2.37:0,2,8	0/1:8,7:14:97.17:135,0,97	0/0:14,0:9:1.90:0,2,162	0/0:16,0:10:23.28:0,23,237	0/0:8,0:8:18.04:0,18,229	0/0:7,0:7:20.53:0,21,184
chr10	82461339	.	GTGAT	G	51.17	PASS	AB=0.956;AC=7;AF=0.135;AN=52;BaseQRankSum=5.126;DP=479;FS=42.288;HRun=0;HaplotypeScore=115.4907;InbreedingCoeff=0.0489;MQ=32.54;MQ0=89;MQRankSum=-4.521;QD=0.67;ReadPosRankSum=2.596;VQSLOD=0.4369;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:13:26.58:0,27,606	0/1:5,2:5:45.08:56,0,45	0/0:30,0:6:18.05:0,18,431	0/0:34,0:4:12.04:0,12,344	./.	0/1:19,0:13:24.78:25,0,358	0/0:31,0:25:57.87:0,58,1425	0/0:13,0:3:6.02:0,6,172	0/0:10,0:8:23.82:0,24,524	0/1:21,0:12:45.52:46,0,264	1/1:13,0:8:3.94:25,4,0	0/0:16,0:10:26.78:0,27,488	0/0:15,0:13:13.46:0,13,672	0/0:15,0:12:2.09:0,2,523	0/1:8,0:6:12.77:13,0,309	0/0:14,0:13:38.69:0,39,606	0/0:12,0:11:23.97:0,24,692	0/1:8,0:7:7.26:7,0,338	0/0:27,1:12:27.41:0,27,512	0/0:11,0:8:12.92:0,13,296	0/0:55,0:44:55.79:0,56,1333	./.	0/0:9,0:8:9.05:0,9,165	0/0:22,0:19:47.86:0,48,1201	0/0:13,0:11:21.61:0,22,553	0/0:22,1:16:38.17:0,38,609	0/0:14,0:13:30.93:0,31,585	0/0:5,0:5:5.98:0,6,100
chr10	82461404	.	GGTA	G	125.36	PASS	AB=0.909;AC=14;AF=0.259;AN=54;BaseQRankSum=6.061;DP=471;FS=28.493;HRun=0;HaplotypeScore=84.3852;InbreedingCoeff=0.1759;MQ=34.68;MQ0=105;MQRankSum=-4.980;QD=1.44;ReadPosRankSum=-2.100;VQSLOD=-0.3153;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:14:16.90:0,17,99	1/1:2,0:1:2.88:15,3,0	0/0:30,0:1:2.99:0,3,24	./.	0/0:9,0:5:6.02:0,6,138	0/1:7,1:6:20.69:21,0,69	0/0:26,0:18:16.95:0,17,321	0/0:20,0:5:9.02:0,9,150	0/0:12,0:10:26.28:0,26,501	0/1:18,1:10:88.53:89,0,178	1/1:4,1:4:0.12:0,0,0	0/0:11,0:7:12.01:0,12,187	0/0:18,0:13:26.76:0,27,523	0/0:13,0:12:29.71:0,30,498	0/0:9,0:7:18.06:0,18,375	0/0:12,0:12:33.11:0,33,668	0/0:17,0:17:51.14:0,51,1076	0/0:11,0:11:23.10:0,23,571	0/0:22,0:5:14.94:0,15,142	0/1:5,1:5:10.13:10,0,109	0/0:83,0:54:88.09:0,88,1636	0/1:3,1:3:7.34:7,0,9	1/1:5,0:1:2.60:10,3,0	0/0:28,0:26:66.33:0,66,1177	0/1:21,1:15:47.43:47,0,231	0/1:14,0:10:13.61:40,0,14	0/0:11,0:8:3.30:0,3,222	1/1:2,0:1:2.99:23,3,0
chr10	82461411	.	ATGG	A	572.98	PASS	AB=0.760;AC=9;AF=0.173;AN=52;BaseQRankSum=2.122;DP=462;FS=3.207;HRun=0;HaplotypeScore=81.0356;InbreedingCoeff=0.4822;MQ=35.35;MQ0=87;MQRankSum=-2.223;QD=7.16;ReadPosRankSum=-0.712;VQSLOD=2.5532;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,11:14:0.09:183,0,0	0/0:2,0:1:3.01:0,3,35	0/0:23,0:1:3.01:0,3,36	./.	0/0:7,0:5:6.02:0,6,93	0/0:9,0:7:9.72:0,10,58	0/1:13,5:11:16.70:190,0,17	./.	0/0:17,0:15:39.13:0,39,711	0/0:23,0:14:25.92:0,26,223	0/0:5,0:4:0.30:0,0,1	0/0:10,0:6:12.04:0,12,204	0/0:18,0:13:24.03:0,24,421	0/0:14,0:12:20.84:0,21,281	0/0:7,1:6:15.05:0,15,284	0/0:12,0:12:27.07:0,27,481	0/0:20,0:20:51.10:0,51,932	0/0:12,0:12:30.06:0,30,550	1/1:14,4:6:1.55:155,2,0	0/0:6,0:5:0:0,0,0	0/0:81,1:55:36.23:0,36,1365	0/0:4,0:4:5.50:0,6,68	0/0:4,0:1:2.84:0,3,14	0/0:29,0:26:54.17:0,54,975	0/0:25,0:18:19.78:0,20,255	1/1:11,2:9:8.64:102,9,0	1/1:8,2:8:5.04:65,5,0	0/0:2,0:1:0:0,0,0
chr10	82462165	.	GGT	G	573.49	PASS	AB=0.913;AC=21;AF=0.389;AN=54;BaseQRankSum=6.803;DP=651;FS=6.311;HRun=0;HaplotypeScore=90.7799;InbreedingCoeff=-0.3661;MQ=65.90;MQ0=10;MQRankSum=-1.573;QD=1.31;ReadPosRankSum=3.455;VQSLOD=1.0751;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,1:35:54.89:55,0,96	0/1:9,2:11:20.82:21,0,96	./.	0/0:32,0:16:0:0,0,0	0/0:26,0:26:12.70:0,13,309	0/1:26,3:29:99:104,0,155	0/1:24,1:26:65.04:65,0,197	0/0:26,0:26:2.98:0,3,22	0/1:11,0:11:30.94:31,0,99	0/0:17,0:17:15.01:0,15,166	0/1:17,1:18:17.80:18,0,144	0/1:23,7:30:65.41:65,0,312	0/1:20,0:20:11.59:12,0,198	0/1:13,1:15:25.89:26,0,182	0/1:27,1:30:22.90:23,0,226	0/1:19,1:20:11.78:12,0,228	0/1:19,4:23:38.60:39,0,256	0/0:13,0:14:6.96:0,7,218	0/0:24,0:21:6:0,6,68	0/0:22,0:22:30.06:0,30,386	0/1:47,1:48:49.96:50,0,312	0/1:17,2:19:2.95:3,0,340	0/1:18,1:20:28.87:29,0,159	0/1:26,2:29:20.36:20,0,244	0/0:17,0:17:10.91:0,11,177	1/1:14,0:16:8.48:41,8,0	0/1:17,3:21:46.64:47,0,325	1/1:4,0:16:14.20:70,14,0
chr10	82462580	.	G	GTTT	2580.23	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=8.756;DP=560;FS=0.000;HRun=10;HaplotypeScore=84.1101;InbreedingCoeff=0.8226;MQ=75.98;MQ0=0;MQRankSum=1.466;QD=14.66;ReadPosRankSum=-4.422;VQSLOD=0.2739;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,1:18:23.93:218,24,0	0/0:6,0:7:14.94:0,15,159	0/1:15,0:15:26.49:26,0,108	0/1:8,0:9:5.80:6,0,57	0/0:37,0:37:93.17:0,93,1117	0/0:26,0:26:66.16:0,66,802	1/1:5,1:19:35.88:327,36,0	1/1:9,3:38:81.55:756,82,0	0/0:20,0:20:48.10:0,48,583	0/0:21,0:22:46.39:0,46,558	0/0:25,0:26:56.95:0,57,674	0/0:11,0:11:21:0,21,243	0/0:19,0:19:35.98:0,36,423	0/0:13,0:13:36.10:0,36,435	0/0:20,0:20:51.08:0,51,606	0/0:11,0:11:30.07:0,30,365	0/0:21,0:23:50.94:0,51,554	0/0:19,0:21:44.74:0,45,545	1/1:11,0:22:47.80:363,48,0	1/1:4,0:27:59.67:444,60,0	0/0:17,0:17:36.06:0,36,438	0/0:16,0:17:45.04:0,45,528	0/0:23,0:23:60.05:0,60,712	0/0:11,0:11:30.05:0,30,350	0/0:16,0:16:39.04:0,39,461	0/0:27,0:27:69.16:0,69,829	1/1:10,0:28:77.30:632,77,0	0/0:16,0:17:19.06:0,19,466
chr10	82464431	.	AT	A	1474.95	PASS	AB=0.803;AC=23;AF=0.411;AN=56;BaseQRankSum=4.209;DP=294;FS=11.322;HRun=2;HaplotypeScore=88.3245;InbreedingCoeff=-0.6237;MQ=60.63;MQ0=0;MQRankSum=-2.397;QD=5.83;ReadPosRankSum=0.048;VQSLOD=-0.5349;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:47.72:97,0,48	0/1:4,3:7:29.47:38,0,29	0/0:4,0:4:9.03:0,9,129	0/0:1,0:1:2.99:0,3,23	0/1:10,10:20:44.34:145,0,44	0/1:4,7:11:13.05:105,0,13	0/0:1,0:1:2.60:0,3,10	0/1:21,0:21:34.06:34,0,37	0/1:8,2:10:25.23:58,0,25	0/1:10,7:17:42.47:144,0,42	0/1:9,4:13:45.51:46,0,64	0/1:8,0:8:8.26:8,0,63	0/1:6,1:7:6.29:6,0,58	0/1:5,2:7:0.95:52,0,1	0/1:4,6:10:22.13:106,0,22	0/1:3,1:4:6.89:7,0,24	0/1:11,15:26:34.41:251,0,34	0/1:5,6:11:28.62:101,0,29	0/1:10,0:10:21.43:25,0,21	0/1:8,0:8:36:60,0,36	0/1:2,1:3:6.91:38,0,7	0/1:4,1:5:26.45:35,0,26	0/1:5,4:9:32.18:59,0,32	0/1:5,1:6:12.67:13,0,26	0/1:6,5:11:48.54:71,0,49	0/0:11,0:11:7.96:0,8,129	0/1:10,0:10:3.59:126,0,4	0/0:24,0:24:64.32:0,64,378
chr10	82464434	.	AATT	A	2171.03	PASS	AB=0.746;AC=19;AF=0.352;AN=54;BaseQRankSum=1.420;DP=290;FS=4.940;HRun=0;HaplotypeScore=97.3602;InbreedingCoeff=-0.2882;MQ=60.12;MQ0=0;MQRankSum=0.700;QD=11.61;ReadPosRankSum=5.634;VQSLOD=2.3272;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:23.87:0,24,170	0/1:5,3:8:12.98:91,0,13	0/0:4,0:4:9:0,9,96	./.	0/1:12,10:22:12.05:354,0,12	1/1:4,7:11:8.11:167,8,0	0/0:1,0:1:2.98:0,3,21	0/0:23,0:23:31.40:0,31,234	0/1:6,2:8:24.47:84,0,24	0/1:8,7:15:38.64:194,0,39	0/1:8,6:14:50.79:109,0,51	0/1:7,0:7:1.07:1,0,44	0/1:6,1:7:20.77:21,0,44	0/1:3,2:5:2.20:54,0,2	0/1:5,6:11:13.12:188,0,13	0/1:3,1:4:17.99:20,0,18	0/1:13,15:28:9.34:501,0,9	0/1:5,6:11:25.10:166,0,25	0/0:10,0:10:20.76:0,21,162	0/0:6,0:6:17.85:0,18,154	0/1:1,1:2:6.13:31,0,6	0/1:4,1:5:21.80:22,0,33	0/1:5,4:9:10.31:132,0,10	0/1:3,1:4:14.45:37,0,14	0/1:11,5:16:48.84:155,0,49	0/0:10,0:10:29.17:0,29,484	0/0:9,0:9:26.23:0,26,168	0/0:22,0:22:64.36:0,64,984
chr10	82465964	.	T	TG	35.16	PASS	AC=6;AF=0.75;AN=8;BaseQRankSum=0.727;DP=114;FS=0.000;HRun=0;HaplotypeScore=5.6492;MQ=9.19;MQ0=87;MQRankSum=0.727;QD=3.20;ReadPosRankSum=0.727;VQSLOD=1.4979;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:1,1:1:3.01:43,3,0	./.	1/1:4,0:1:2.97:20,3,0	./.	./.	1/1:3,2:1:3.01:43,3,0	./.	./.	./.	./.	./.	./.	0/0:2,1:1:3.01:0,3,42	./.	./.	./.	./.	./.
chr10	82466370	.	G	GC	1050.70	PASS	AB=0.917;AC=12;AF=0.214;AN=56;BaseQRankSum=13.373;DP=1676;FS=20.419;HRun=0;HaplotypeScore=360.8146;InbreedingCoeff=-0.0781;MQ=45.98;MQ0=159;MQRankSum=-13.403;QD=1.64;ReadPosRankSum=-2.890;VQSLOD=0.2535;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,1:46:2.57:0,3,840	0/0:35,2:36:7.29:0,7,651	0/0:71,3:18:54.17:0,54,727	0/0:63,3:10:24.28:0,24,372	0/0:74,4:75:65.63:0,66,1235	0/0:71,1:69:99:0,131,1900	0/1:26,1:22:99:126,0,287	1/1:45,5:11:26.45:161,26,0	0/0:57,2:58:86.17:0,86,1479	0/1:89,6:86:63.51:64,0,1987	0/0:59,3:58:90.59:0,91,1150	0/0:47,1:47:75.34:0,75,1230	0/0:53,3:55:63.58:0,64,1251	0/0:59,1:58:99:0,99,1612	0/0:69,1:68:99:0,115,1717	0/0:69,1:68:99:0,117,1911	0/0:51,0:49:99:0,129,1551	0/1:31,3:33:27.25:27,0,371	0/1:29,1:27:99:192,0,431	0/1:74,3:76:99:105,0,1835	0/0:77,2:74:99:0,117,1620	0/1:57,11:67:9.35:9,0,1235	0/1:52,14:66:59.53:60,0,959	0/0:44,1:45:68.83:0,69,944	0/0:57,5:61:65.21:0,65,1443	0/1:74,16:87:99:173,0,2305	0/1:71,2:72:99:219,0,1530	0/1:27,3:30:70.77:71,0,767
chr10	82468521	.	AAC	A	271.81	PASS	AB=0.890;AC=21;AF=0.420;AN=50;BaseQRankSum=5.590;DP=498;FS=8.456;HRun=0;HaplotypeScore=68.7622;InbreedingCoeff=-0.2814;MQ=67.58;MQ0=10;MQRankSum=0.795;QD=0.88;ReadPosRankSum=1.795;VQSLOD=0.5989;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:1.79:39,2,0	0/1:6,0:6:23.42:23,0,58	0/0:23,0:18:0:0,0,0	./.	0/0:16,1:17:24.05:0,24,318	0/1:9,2:11:17.90:18,0,165	0/1:15,0:21:9.35:19,0,9	./.	0/1:15,4:19:17.90:18,0,165	0/0:17,0:17:3.88:0,4,152	0/1:8,4:12:23.99:24,0,54	0/0:10,0:10:9.29:0,9,58	0/1:9,0:9:0.73:1,0,101	0/1:10,0:10:11.10:11,0,123	0/1:7,1:8:14.90:15,0,187	0/1:13,2:14:11.87:12,0,249	0/1:29,7:35:32.78:33,0,346	0/0:22,0:21:27.04:0,27,355	0/1:9,0:9:9.89:10,0,39	1/1:17,0:17:13.45:95,13,0	0/1:19,2:21:3.69:4,0,266	0/1:15,2:16:25.66:26,0,265	0/0:21,1:22:1.38:0,1,384	0/1:28,3:31:26.74:27,0,426	0/0:27,0:28:21.97:0,22,416	0/1:14,0:17:6.18:6,0,60	1/1:9,4:13:2.91:33,3,0	./.
chr10	82469552	.	GA	G	5283.05	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.277;DP=564;FS=0.808;HRun=1;HaplotypeScore=68.4962;InbreedingCoeff=0.9929;MQ=67.87;MQ0=0;MQRankSum=-1.815;QD=38.28;ReadPosRankSum=1.454;VQSLOD=5.4219;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,48:48:99:1803,129,0	0/0:8,0:8:24.03:0,24,351	0/0:31,0:28:78.24:0,78,1202	0/0:26,0:25:72.23:0,72,1079	0/0:14,0:14:39.13:0,39,621	0/0:18,0:18:54.16:0,54,838	1/1:0,27:27:72.24:1006,72,0	1/1:0,19:19:57.19:797,57,0	0/0:18,0:18:54.17:0,54,839	0/0:24,0:24:72.23:0,72,1125	0/0:10,0:10:27.08:0,27,397	0/0:13,0:13:39.13:0,39,621	0/0:22,0:22:66.19:0,66,1006	0/0:17,0:17:51.17:0,51,812	0/0:13,0:13:39.13:0,39,623	0/0:19,0:19:57.18:0,57,888	0/0:37,0:37:99:0,111,1737	0/0:31,0:31:93.28:0,93,1419	1/1:0,17:17:42.14:587,42,0	1/1:0,12:12:36.12:503,36,0	0/0:32,0:32:96.29:0,96,1481	0/0:11,0:11:30.10:0,30,477	0/0:10,0:10:30.10:0,30,477	0/0:32,0:32:96.31:0,96,1505	0/0:15,0:15:45.14:0,45,684	0/0:21,0:21:63.20:0,63,969	1/1:0,15:15:42.13:587,42,0	0/0:4,0:4:12.04:0,12,191
chr10	82470434	.	GCAGTCACC	G	11920.89	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=17.513;DP=673;FS=5.447;HRun=0;HaplotypeScore=221.9350;InbreedingCoeff=0.9999;MQ=85.53;MQ0=0;MQRankSum=-17.322;QD=64.09;ReadPosRankSum=0.035;VQSLOD=4.3992;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,27:35:72.23:1911,72,0	0/0:12,0:12:36.12:0,36,1605	0/0:26,0:26:66.22:0,66,2674	0/0:25,0:25:51.17:0,51,1999	0/0:19,0:19:54.17:0,54,2277	0/0:22,0:22:66.23:0,66,2889	1/1:9,24:33:72.23:2000,72,0	1/1:5,17:22:51.18:1433,51,0	0/0:22,0:22:66.23:0,66,2766	0/0:28,0:28:81.28:0,81,3506	0/0:20,0:20:54.19:0,54,2344	0/0:20,0:20:60.21:0,60,2682	0/0:17,0:17:51.18:0,51,2219	0/0:32,0:32:96.32:0,96,4103	0/0:18,0:18:54.17:0,54,2293	0/0:25,0:25:75.26:0,75,3330	0/0:41,0:41:99:0,123,5299	0/0:28,0:28:84.29:0,84,3748	1/1:4,16:20:45.15:1290,45,0	1/1:3,21:24:60.21:1666,60,0	0/0:32,0:32:96.33:0,96,4197	0/0:30,0:30:84.27:0,84,3556	0/0:19,0:19:57.20:0,57,2478	0/0:38,0:38:99:0,114,4476	0/0:13,0:13:39.11:0,39,1559	1/1:3,19:22:54.19:1547,54,0	1/1:3,15:18:45.15:1288,45,0	1/1:4,8:12:36.06:786,36,0
chr10	82470449	.	CG	C	6685.93	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.900;DP=698;FS=2.824;HRun=1;HaplotypeScore=137.5605;InbreedingCoeff=0.9999;MQ=86.32;MQ0=0;MQRankSum=-17.453;QD=35.00;ReadPosRankSum=-0.723;VQSLOD=4.3354;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:69.23:949,69,0	0/0:15,0:15:45.10:0,45,668	0/0:30,0:30:86.93:0,87,1303	0/0:23,0:23:66.03:0,66,954	0/0:27,0:27:78.27:0,78,1241	0/0:30,0:30:90.31:0,90,1435	1/1:0,29:29:69.23:959,69,0	1/1:0,27:27:75.25:1047,75,0	0/0:25,0:25:75.21:0,75,1123	0/0:29,0:29:87.21:0,87,1340	0/0:17,0:17:48.15:0,48,739	0/0:22,0:22:66.20:0,66,1008	0/0:17,0:17:51.17:0,51,805	0/0:29,0:29:87.12:0,87,1315	0/0:18,0:18:54.18:0,54,863	0/0:27,0:27:81.23:0,81,1262	0/0:44,0:44:99:0,132,2067	0/0:26,0:26:78.25:0,78,1217	1/1:0,21:21:60.20:836,60,0	1/1:0,22:22:60.20:831,60,0	0/0:33,0:33:93.32:0,93,1468	0/0:27,0:27:75.25:0,75,1185	0/0:19,0:19:57.19:0,57,904	0/0:36,0:36:99:0,108,1683	0/0:13,0:13:39.11:0,39,578	1/1:0,24:24:66.20:901,66,0	1/1:0,20:20:51.17:703,51,0	1/1:0,13:13:33.11:460,33,0
chr10	82471565	.	C	CG	9509.89	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-10.692;DP=690;FS=0.969;HRun=0;HaplotypeScore=68.7424;InbreedingCoeff=0.9999;MQ=90.35;MQ0=0;MQRankSum=-3.637;QD=45.50;ReadPosRankSum=-2.148;VQSLOD=4.1708;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:99:1773,111,0	0/0:16,0:16:48.16:0,48,669	0/0:23,0:23:54.22:0,54,861	0/0:33,0:33:77.79:0,78,1043	0/0:27,0:27:81.25:0,81,1115	0/0:22,0:22:66.20:0,66,904	1/1:0,32:32:90.31:1438,90,0	1/1:1,32:33:96.33:1523,96,0	0/0:20,0:20:60.20:0,60,837	0/0:27,0:27:75.24:0,75,1020	0/0:20,0:20:60.20:0,60,838	0/0:21,0:21:57.19:0,57,797	0/0:23,0:23:69.23:0,69,962	0/0:20,0:20:60.20:0,60,839	0/0:26,0:26:75.24:0,75,1031	0/0:20,0:20:57.19:0,57,797	0/0:34,0:34:99:0,99,1365	0/0:19,0:19:57.19:0,57,797	1/1:0,21:21:60.19:927,60,0	1/1:0,27:27:75.26:1198,75,0	0/0:37,0:37:99:0,108,1507	0/0:27,0:27:81.26:0,81,1115	0/0:22,0:22:66.22:0,66,921	0/0:31,0:31:93.31:0,93,1297	0/0:12,0:12:33.11:0,33,462	1/1:1,20:21:60.20:927,60,0	1/1:1,22:23:66.23:1054,66,0	1/1:0,14:14:42.14:670,42,0
chr10	82472180	.	GT	G	8671.42	PASS	AB=0.941;AC=37;AF=0.661;AN=56;BaseQRankSum=-8.270;DP=595;FS=1.822;HRun=9;HaplotypeScore=133.0208;InbreedingCoeff=0.9186;MQ=75.19;MQ0=2;MQRankSum=5.796;QD=21.00;ReadPosRankSum=9.400;VQSLOD=2.8173;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:33.72:0,34,178	1/1:2,11:13:35.99:323,36,0	0/0:31,1:28:29.48:0,29,440	0/0:27,0:24:33.44:0,33,489	1/1:1,21:22:51.01:467,51,0	1/1:2,19:21:54.03:493,54,0	0/0:10,0:20:17.11:0,17,97	0/0:27,0:24:47.49:0,47,327	1/1:1,8:9:21.01:192,21,0	1/1:4,22:26:68.53:612,69,0	1/1:4,14:18:47.51:406,48,0	1/1:5,11:16:35.81:315,36,0	1/1:1,9:10:20.90:192,21,0	1/1:4,14:18:47.21:404,47,0	1/1:1,14:15:42.02:384,42,0	1/1:2,21:23:65.62:586,66,0	1/1:2,34:36:90.05:822,90,0	1/1:1,35:36:99:906,99,0	0/0:10,0:21:33.45:0,33,199	0/0:9,0:16:18.23:0,18,95	1/1:3,36:39:93.05:849,93,0	1/1:4,16:20:51.01:462,51,0	1/1:1,10:11:30.01:274,30,0	1/1:3,28:31:69.03:631,69,0	1/1:5,12:17:41.29:351,41,0	0/1:5,2:32:2.06:2,0,206	0/0:13,0:13:17.44:0,17,117	0/0:0,0:2:2.84:0,3,14
chr10	82472774	.	AG	A	3635.73	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.118;DP=522;FS=8.500;HRun=4;HaplotypeScore=119.8588;InbreedingCoeff=0.9871;MQ=85.41;MQ0=0;MQRankSum=-12.412;QD=28.63;ReadPosRankSum=-3.806;VQSLOD=1.1934;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:23:54.16:647,54,0	0/0:6,0:6:18.06:0,18,252	0/0:15,0:15:42.14:0,42,583	0/0:26,0:26:69.15:0,69,912	0/0:16,0:16:48.16:0,48,665	0/0:11,0:11:33.11:0,33,461	1/1:3,16:19:42.13:503,42,0	1/1:4,18:21:30.74:621,31,0	0/0:24,0:24:66.22:0,66,923	0/0:24,0:24:63.20:0,63,868	0/0:9,0:9:27.09:0,27,377	0/0:14,0:14:42.14:0,42,588	0/0:22,0:22:60.20:0,60,840	0/0:22,0:22:63.20:0,63,865	0/0:19,0:19:51.08:0,51,670	0/0:20,0:20:60.20:0,60,831	0/0:29,0:29:78.24:0,78,1058	0/0:21,0:21:57.17:0,57,778	1/1:4,7:10:24.02:263,24,0	1/1:1,12:13:30.09:359,30,0	0/0:49,0:49:99:0,141,1955	0/0:16,0:16:48.16:0,48,672	0/0:14,0:14:36.11:0,36,487	0/0:31,0:31:93.30:0,93,1286	0/0:7,0:7:21.06:0,21,279	1/1:2,21:23:24.18:714,24,0	1/1:1,11:12:36.10:420,36,0	1/1:0,3:3:9.03:108,9,0
chr10	82472788	.	A	AG	3931.86	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.530;DP=503;FS=22.476;HRun=0;HaplotypeScore=114.2840;InbreedingCoeff=0.9919;MQ=77.89;MQ0=0;MQRankSum=-11.582;QD=33.61;ReadPosRankSum=-2.736;VQSLOD=1.4987;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,15:19:42.01:544,42,0	0/0:6,0:6:18.06:0,18,251	0/0:14,0:13:39.11:0,39,528	0/0:22,0:21:63.20:0,63,856	0/0:18,0:18:54.18:0,54,755	0/0:14,0:14:39.13:0,39,545	1/1:1,12:13:30.10:444,30,0	1/1:1,15:15:36.12:532,36,0	0/0:22,0:22:66.18:0,66,893	0/0:27,0:27:81.24:0,81,1097	0/0:9,0:9:27.09:0,27,376	0/0:14,0:14:42.14:0,42,587	0/0:21,0:21:63.21:0,63,869	0/0:21,0:21:57.19:0,57,796	0/0:16,0:16:48.16:0,48,670	0/0:22,0:22:66.22:0,66,923	0/0:24,0:24:72.24:0,72,996	0/0:24,0:24:72.20:0,72,969	1/1:1,11:11:27.09:394,27,0	1/1:1,12:13:33.11:483,33,0	0/0:43,0:43:99:0,126,1760	0/0:18,0:18:54.14:0,54,733	0/0:12,0:12:36.12:0,36,503	0/0:31,0:31:93.28:0,93,1265	0/0:8,0:8:24.08:0,24,336	1/1:3,18:21:21.22:796,21,0	1/1:1,12:13:39.13:562,39,0	1/1:0,9:9:12.04:178,12,0
chr10	82473045	.	TG	T	108.40	PASS	AC=6;AF=0.125;AN=48;BaseQRankSum=2.353;DP=74;FS=0.000;HRun=3;HaplotypeScore=13.3041;InbreedingCoeff=0.4285;MQ=56.77;MQ0=0;MQRankSum=0.678;QD=15.49;ReadPosRankSum=0.234;VQSLOD=2.5799;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:3.01:38,3,0	0/0:1,0:1:3.01:0,3,45	0/0:1,0:1:3.01:0,3,55	0/0:2,0:1:6.02:0,6,89	0/0:5,0:5:9.03:0,9,133	0/0:5,0:5:15.05:0,15,222	0/0:1,0:1:0:0,0,0	1/1:1,0:1:3:26,3,0	0/0:4,0:4:12.04:0,12,178	0/0:3,0:3:6.02:0,6,89	0/0:4,0:4:8.99:0,9,109	0/0:2,0:2:6.02:0,6,90	0/0:2,0:2:6.02:0,6,81	0/0:3,0:3:9.02:0,9,116	0/0:3,0:3:9.03:0,9,133	0/0:4,0:4:12.04:0,12,179	0/0:4,0:4:3.01:0,3,45	0/0:3,0:3:5.93:0,6,90	./.	./.	0/0:7,0:7:12.50:0,12,161	0/0:6,0:6:15.01:0,15,199	0/0:2,0:2:6.02:0,6,74	0/0:2,0:2:3.01:0,3,45	0/0:3,0:3:9.02:0,9,116	1/1:0,4:4:12.04:155,12,0	./.	./.
chr10	82474210	.	CTTT	C	288.05	PASS	AB=0.700;AC=9;AF=0.167;AN=54;BaseQRankSum=4.869;DP=385;FS=0.000;HRun=3;HaplotypeScore=80.9400;InbreedingCoeff=0.7565;MQ=63.79;MQ0=21;MQRankSum=-5.560;QD=13.72;ReadPosRankSum=-1.286;VQSLOD=-0.2375;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:4,3:4:5.43:45,0,5	0/0:4,0:4:11.25:0,11,194	0/0:31,0:13:36.02:0,36,713	0/0:39,0:18:34.26:0,34,554	0/0:17,0:13:29.87:0,30,490	0/0:14,0:14:30.09:0,30,579	1/1:1,7:6:15.05:229,15,0	1/1:1,1:2:2.69:7,3,0	0/0:17,0:17:48.15:0,48,943	0/0:18,0:17:47.25:0,47,945	0/0:16,0:15:42.14:0,42,863	0/0:15,0:15:38.58:0,39,706	0/0:8,0:7:18.04:0,18,313	0/0:8,0:7:21.07:0,21,429	0/0:12,0:12:33.11:0,33,643	0/0:11,0:11:30.05:0,30,574	0/0:24,0:24:48.62:0,49,910	0/0:20,0:19:23.92:0,24,801	1/1:0,1:1:3.01:51,3,0	./.	0/0:26,0:21:45.92:0,46,686	0/0:13,0:12:31.86:0,32,462	0/0:10,0:10:24.01:0,24,378	0/0:20,0:19:17.46:0,17,558	0/0:14,0:13:33.11:0,33,689	0/0:20,0:20:54.61:0,55,354	1/1:1,2:3:8.94:91,9,0	0/0:6,0:6:14.67:0,15,92
chr10	82474279	.	T	TTC	305.78	PASS	AB=0.883;AC=12;AF=0.240;AN=50;BaseQRankSum=6.096;DP=332;FS=44.983;HRun=0;HaplotypeScore=46.2604;InbreedingCoeff=0.0162;MQ=41.33;MQ0=29;MQRankSum=-4.893;QD=2.32;ReadPosRankSum=-1.090;VQSLOD=0.1414;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,2:4:3.01:47,3,0	0/1:3,2:5:68.93:69,0,129	0/1:36,0:2:5.01:5,0,32	0/0:55,0:6:15.05:0,15,244	0/1:17,2:17:13.71:14,0,544	0/0:12,2:12:21.07:0,21,327	0/0:3,0:1:3.01:0,3,49	0/0:6,0:2:0.89:0,1,2	0/0:11,0:10:14.75:0,15,201	0/1:11,2:12:59.82:60,0,421	0/1:8,1:9:32.10:32,0,272	0/0:9,0:9:23.73:0,24,330	0/0:4,0:4:12.04:0,12,185	0/1:6,1:6:44.07:44,0,132	0/1:10,1:11:17.87:18,0,363	0/0:10,1:10:20.54:0,21,326	0/0:15,2:16:31.90:0,32,483	0/0:11,0:9:21.07:0,21,334	./.	./.	0/1:17,3:19:60.27:60,0,611	0/0:14,0:14:33.11:0,33,532	0/0:6,0:7:11.86:0,12,194	0/0:20,0:18:36.11:0,36,561	0/0:7,0:6:15.05:0,15,244	1/1:2,2:2:6.02:96,6,0	0/0:3,0:2:3.22:0,3,13	./.
chr10	82474850	.	CTGTGTGTGTGTGTGTGTG	C	5967.45	PASS	AB=0.947;AC=29;AF=0.518;AN=56;BaseQRankSum=-1.296;DP=550;FS=2.480;HRun=0;HaplotypeScore=257.0938;InbreedingCoeff=0.4069;MQ=66.04;MQ0=13;MQRankSum=3.540;QD=18.42;ReadPosRankSum=4.392;VQSLOD=3.3387;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:32.96:0,33,364	1/1:11,0:11:14.95:200,15,0	0/0:25,0:17:8.99:0,9,78	0/0:33,0:24:17.82:0,18,154	0/0:11,10:22:2.98:0,3,21	0/1:21,0:19:3.10:374,0,3	0/0:21,0:21:15.04:0,15,208	0/0:32,0:31:46.95:0,47,354	0/1:17,0:19:21.36:421,0,21	0/1:18,11:28:18.72:600,0,19	1/1:16,0:15:15:224,15,0	0/1:21,0:21:64.62:437,0,65	1/1:17,0:17:12.45:328,12,0	0/1:13,0:13:3.51:296,0,4	1/1:19,0:19:17.37:429,17,0	1/1:9,0:9:6.01:72,6,0	1/1:15,0:15:0.04:346,0,0	1/1:11,0:11:20.89:353,21,0	0/0:15,0:14:11.87:0,12,328	0/0:12,0:12:6:0,6,104	1/1:36,0:35:30:427,30,0	0/0:10,10:19:2.68:0,3,11	1/1:13,0:12:5.09:281,5,0	1/1:26,0:25:30.16:845,30,0	1/1:13,0:13:14.44:281,14,0	0/1:29,0:28:48.64:49,0,268	0/0:14,0:14:27.10:0,27,494	0/1:6,0:6:4.43:4,0,35
chr10	82474870	.	GTGTGTGTGTGTGTGTGTGTGTGTA	G	641.34	PASS	AB=0.957;AC=8;AF=0.143;AN=56;BaseQRankSum=4.308;DP=558;FS=0.000;HRun=0;HaplotypeScore=313.7754;InbreedingCoeff=-0.2329;MQ=47.43;MQ0=28;MQRankSum=1.982;QD=3.96;ReadPosRankSum=4.714;VQSLOD=1.4490;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:24.01:0,24,268	0/0:10,0:10:0.73:0,1,20	0/0:13,0:5:2.98:0,3,22	0/0:17,0:8:2.97:0,3,20	0/0:22,0:22:9.01:0,9,168	0/1:18,0:16:11.13:11,0,144	0/0:22,0:21:12:0,12,123	0/0:29,0:28:41.26:0,41,281	0/1:23,0:22:4.99:5,0,398	0/0:29,0:27:3.28:0,3,260	0/0:17,0:16:9.46:0,9,120	0/0:28,0:27:38.59:0,39,895	0/0:19,0:19:12.13:0,12,799	0/0:15,0:14:7.52:0,8,205	0/1:14,0:13:13.50:14,0,228	0/0:7,0:7:2.98:0,3,22	0/1:16,0:14:23.78:24,0,87	0/1:11,0:11:38.65:39,0,46	0/0:14,0:13:19.86:0,20,580	0/0:13,0:12:11.31:0,11,363	0/0:40,0:37:11.06:0,11,451	0/0:21,0:20:6.02:0,6,115	0/0:18,0:16:9.29:0,9,113	0/1:32,0:30:51.66:52,0,478	0/0:16,0:15:2.69:0,3,274	0/1:17,19:33:99:573,0,182	0/0:15,0:15:30.95:0,31,704	0/1:12,0:12:49.93:50,0,275
chr10	82474890	.	GTGTA	G	3704.19	PASS	AB=0.986;AC=41;AF=0.820;AN=50;BaseQRankSum=-1.787;DP=533;FS=8.784;HRun=0;HaplotypeScore=180.1419;InbreedingCoeff=-0.1898;MQ=46.64;MQ0=32;MQRankSum=4.481;QD=7.23;ReadPosRankSum=-1.435;VQSLOD=1.9874;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:17.53:157,18,0	1/1:7,0:7:1.67:7,2,0	./.	./.	1/1:32,0:32:23.73:186,24,0	1/1:14,1:14:9.87:71,10,0	1/1:23,1:23:7.51:80,8,0	1/1:27,0:23:53.80:321,54,0	1/1:19,0:18:12.61:108,13,0	0/1:26,2:24:91.64:174,0,92	1/1:15,0:14:11.33:81,11,0	1/1:24,0:23:6.21:186,6,0	0/1:15,1:16:17.34:166,0,17	1/1:18,0:17:15.24:186,15,0	1/1:16,0:15:20.57:123,21,0	./.	0/1:13,0:11:11.69:12,0,29	0/1:11,0:11:39.52:72,0,40	0/1:10,0:8:4.25:102,0,4	0/1:10,0:9:8.65:60,0,9	0/1:39,0:35:10.71:160,0,11	1/1:22,0:21:14.06:111,14,0	0/1:20,0:17:2.76:108,0,3	1/1:36,0:34:41.31:264,41,0	1/1:22,0:20:33.31:245,33,0	1/1:31,0:27:39.37:369,39,0	0/1:18,0:17:25.20:152,0,25	1/1:12,0:12:27.33:206,27,0
chr10	82474892	.	GTA	G	5280.97	PASS	AB=0.940;AC=46;AF=0.920;AN=50;BaseQRankSum=-1.686;DP=530;FS=0.000;HRun=0;HaplotypeScore=163.3125;InbreedingCoeff=-0.1066;MQ=47.01;MQ0=31;MQRankSum=4.343;QD=10.29;ReadPosRankSum=-0.777;VQSLOD=4.1227;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,1:25:17.77:167,18,0	1/1:0,7:7:2.60:36,3,0	./.	./.	1/1:31,0:31:23.65:186,24,0	1/1:10,4:13:11.54:153,12,0	1/1:23,1:23:12.87:91,13,0	1/1:8,17:21:53.24:327,53,0	1/1:17,4:20:33.13:292,33,0	0/1:30,0:26:63.79:150,0,64	1/1:13,2:14:14.97:134,15,0	1/1:17,7:23:41.58:422,42,0	1/1:12,4:16:20.10:269,20,0	1/1:13,5:17:17.08:245,17,0	1/1:11,4:14:24:239,24,0	./.	0/1:12,1:11:9.68:116,0,10	0/1:8,2:10:20.16:121,0,20	1/1:10,0:8:15.08:145,15,0	1/1:10,0:9:2.56:63,3,0	1/1:39,1:36:14.86:257,15,0	1/1:21,1:21:14.40:111,14,0	1/1:20,2:19:23.79:204,24,0	1/1:32,6:36:47.25:475,47,0	1/1:17,5:20:35.99:332,36,0	1/1:31,0:27:33.42:366,33,0	0/1:18,0:17:10.05:182,0,10	1/1:12,0:12:22.91:198,23,0
chr10	82474912	.	CTG	C	172.31	PASS	AB=0.895;AC=7;AF=0.125;AN=56;BaseQRankSum=2.241;DP=612;FS=1.862;HRun=0;HaplotypeScore=171.8213;InbreedingCoeff=0.2755;MQ=48.20;MQ0=30;MQRankSum=-4.626;QD=1.66;ReadPosRankSum=-1.338;VQSLOD=2.6108;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:21:2.79:33,3,0	0/0:9,0:9:8.64:0,9,112	0/0:19,0:8:20.49:0,20,228	0/0:13,0:3:8.90:0,9,110	0/0:31,0:31:42.11:0,42,622	0/0:21,0:20:32.52:0,33,424	1/1:23,0:22:1.05:4,1,0	0/1:20,0:16:42.08:42,0,180	0/0:26,0:25:43.72:0,44,575	0/0:32,0:29:58.84:0,59,760	0/0:17,0:17:32.87:0,33,443	0/0:25,0:24:14.85:0,15,482	0/0:20,0:20:42.96:0,43,612	0/0:21,0:20:37.37:0,37,550	0/0:19,0:19:38.23:0,38,511	0/0:16,0:16:15.05:0,15,241	0/0:16,0:15:28.17:0,28,428	0/0:14,0:13:34.78:0,35,394	0/1:10,6:14:99:188,0,178	0/0:15,0:14:26.95:0,27,396	0/0:38,0:34:46.18:0,46,672	0/0:25,0:25:30.10:0,30,472	0/0:23,0:21:38.96:0,39,566	0/0:39,0:37:70.94:0,71,917	0/0:25,0:23:46.96:0,47,599	0/0:32,0:27:52.04:0,52,690	0/1:22,1:22:19.04:19,0,421	0/0:12,0:12:33.06:0,33,474
chr10	82474914	.	G	GTGTC	347.58	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=1.014;DP=625;FS=5.382;HRun=0;HaplotypeScore=193.4008;InbreedingCoeff=0.2331;MQ=48.33;MQ0=29;MQRankSum=-5.181;QD=4.14;ReadPosRankSum=-2.605;VQSLOD=1.8589;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,16:22:5.20:29,5,0	0/0:10,0:10:9.92:0,10,170	0/0:19,0:8:20.56:0,21,239	0/0:14,0:4:8.90:0,9,118	0/0:33,0:33:41.82:0,42,574	0/0:21,0:20:32.94:0,33,518	0/0:5,19:24:2.42:0,2,8	0/1:21,0:17:57.01:57,0,138	0/0:26,0:26:46.53:0,47,712	0/0:32,0:29:55.28:0,55,798	0/0:17,0:17:33.07:0,33,460	0/0:26,0:25:16.57:0,17,533	0/0:20,0:20:50.07:0,50,744	0/0:21,0:20:42.05:0,42,597	0/0:18,0:18:38.58:0,39,617	0/0:16,0:16:15.05:0,15,269	0/0:16,0:15:27.49:0,27,492	0/0:15,0:14:32.99:0,33,483	0/1:18,0:16:99:321,0,144	0/0:17,0:16:26.48:0,26,280	0/0:39,0:35:47.69:0,48,702	0/0:25,0:25:30.09:0,30,409	0/0:23,0:21:39.12:0,39,608	0/0:38,0:36:72.75:0,73,993	0/0:26,0:24:47.56:0,48,585	0/0:32,0:27:53.54:0,54,824	0/1:22,0:21:54.97:55,0,318	0/0:12,0:12:33.11:0,33,589
chr10	82475122	.	GA	G	5150.30	PASS	AB=0.582;AC=37;AF=0.661;AN=56;BaseQRankSum=-10.013;DP=595;FS=5.118;HRun=12;HaplotypeScore=76.1039;InbreedingCoeff=0.7882;MQ=60.86;MQ0=10;MQRankSum=2.101;QD=12.29;ReadPosRankSum=6.501;VQSLOD=4.7457;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:34:80.23:0,80,497	1/1:3,8:11:23.88:185,24,0	0/0:13,0:9:13.66:0,14,138	0/0:7,0:4:8.91:0,9,71	1/1:9,13:24:33.93:242,34,0	1/1:2,19:21:38.83:302,39,0	0/0:9,0:21:25.69:0,26,134	0/0:18,0:42:82.68:0,83,439	1/1:3,15:18:38.23:301,38,0	1/1:11,25:35:67.72:516,68,0	1/1:5,18:23:26.48:367,26,0	0/1:6,16:22:8.15:137,0,8	1/1:4,14:18:29.85:230,30,0	0/1:5,10:14:10.69:102,0,11	1/1:4,15:19:38.82:302,39,0	1/1:2,8:11:10.78:75,11,0	1/1:5,19:24:35.84:279,36,0	1/1:7,12:19:29.23:217,29,0	0/0:8,0:18:32.20:0,32,187	0/0:8,0:18:36.38:0,36,202	0/1:5,16:21:0.55:179,0,1	1/1:10,25:36:36.26:437,36,0	1/1:5,18:24:16.22:300,16,0	1/1:2,7:8:17.93:139,18,0	1/1:2,15:17:26.80:209,27,0	1/1:8,17:25:52.81:400,53,0	0/0:8,0:20:31.12:0,31,186	1/1:9,12:18:29.86:232,30,0
chr10	82475765	.	GTCCTT	G	1686.05	PASS	AB=0.509;AC=3;AF=0.054;AN=56;BaseQRankSum=8.619;DP=641;FS=12.751;HRun=0;HaplotypeScore=127.2322;InbreedingCoeff=0.5969;MQ=85.89;MQ0=0;MQRankSum=-7.247;QD=56.20;ReadPosRankSum=2.999;VQSLOD=4.0737;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,4076	0/0:6,0:6:18.06:0,18,597	0/0:31,0:30:84.24:0,84,2487	0/0:42,0:38:94.12:0,94,2528	0/0:21,0:21:63.22:0,63,2058	0/0:17,0:17:51.18:0,51,1698	0/0:23,0:23:69.22:0,69,2229	0/0:43,0:43:99:0,126,4102	0/0:23,0:22:69.24:0,69,2294	0/0:26,0:26:78.27:0,78,2552	0/0:12,0:12:36.11:0,36,1029	0/0:20,0:20:60.19:0,60,1932	0/0:19,0:19:57.20:0,57,1845	0/0:30,0:30:90.31:0,90,2998	0/0:30,0:30:90.29:0,90,2859	0/0:17,0:17:51.18:0,51,1666	0/0:27,0:27:81.26:0,81,2592	0/0:17,0:17:51.18:0,51,1660	0/0:22,0:22:66.23:0,66,2145	0/0:25,0:25:75.23:0,75,2300	0/0:23,0:23:69.22:0,69,2114	0/0:19,0:19:57.18:0,57,1773	0/0:14,0:14:42.14:0,42,1406	0/0:19,0:19:57.20:0,57,1898	0/0:17,0:17:51.18:0,51,1662	0/1:1,26:27:19.05:1583,0,19	0/0:24,0:23:72.23:0,72,2204	1/1:0,3:3:9.03:200,9,0
chr10	82476557	.	TAGTGCAAATGTC	T	3465.25	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.075;DP=819;FS=2.326;HRun=0;HaplotypeScore=292.3611;InbreedingCoeff=0.9996;MQ=86.11;MQ0=0;MQRankSum=-8.819;QD=96.26;ReadPosRankSum=2.580;VQSLOD=2.9983;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:65:99:0,184,11228	0/0:11,0:11:33.11:0,33,2047	0/0:28,0:28:78.27:0,78,3698	0/0:26,0:26:75.26:0,75,3850	0/0:25,0:25:75.26:0,75,4545	0/0:24,0:24:69.22:0,69,3916	0/0:27,0:27:81.28:0,81,4758	0/0:36,0:36:99:0,105,5560	0/0:29,0:29:87.30:0,87,5302	0/0:21,0:21:60.21:0,60,3478	0/0:26,0:26:75.26:0,75,4335	0/0:34,0:34:99:0,102,6277	0/0:25,0:25:75.26:0,75,4319	0/0:34,0:34:99:0,99,5681	0/0:36,0:36:99:0,108,6032	0/0:29,0:29:87.30:0,87,5168	0/0:34,0:34:99:0,102,6036	0/0:26,0:26:78.27:0,78,4669	0/0:27,0:27:66.23:0,66,3980	0/0:24,0:24:69.24:0,69,4187	0/0:50,0:50:99:0,148,8878	0/0:27,0:27:81.28:0,81,4770	0/0:26,0:26:75.26:0,75,4527	0/0:33,0:33:99:0,99,5917	0/0:25,0:25:75.26:0,75,4527	1/1:5,21:26:63.22:2325,63,0	0/0:35,0:35:99:0,102,6122	1/1:0,10:10:30.10:1140,30,0
chr10	82479329	.	GAC	G	1077.17	PASS	AB=0.929;AC=33;AF=0.660;AN=50;BaseQRankSum=-3.245;DP=406;FS=19.884;HRun=0;HaplotypeScore=112.5625;InbreedingCoeff=-0.1873;MQ=75.18;MQ0=14;MQRankSum=2.842;QD=3.40;ReadPosRankSum=5.400;VQSLOD=0.8005;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:15.07:15,0,27	0/1:8,0:8:16.74:38,0,17	./.	0/0:30,0:22:0:0,0,0	./.	1/1:15,0:15:12.30:58,12,0	0/1:23,0:22:27:27,0,37	1/1:25,5:29:14.90:110,15,0	0/1:14,1:15:14.10:49,0,14	1/1:9,1:9:2.84:14,3,0	0/1:4,0:5:0:0,0,0	0/1:9,2:11:11.88:46,0,12	0/1:7,1:8:0.18:39,0,0	1/1:5,0:6:6.45:47,6,0	1/1:13,1:13:5.86:38,6,0	1/1:9,0:11:8.62:82,9,0	1/1:15,3:17:17.58:105,18,0	1/1:17,0:17:29.70:210,30,0	0/1:14,0:13:14.96:15,0,60	0/1:13,0:12:8.72:44,0,9	0/0:12,0:19:0:0,0,0	1/1:4,0:4:2.98:22,3,0	0/1:5,0:5:0:0,0,0	0/1:17,3:18:21.33:56,0,21	1/1:9,0:9:5.97:45,6,0	0/1:11,0:13:3.53:50,0,4	0/1:12,0:12:40.39:93,0,40	./.
chr10	82479363	.	C	CAGAGAGAG	2380.31	PASS	AB=1.000;AC=26;AF=0.542;AN=48;BaseQRankSum=1.127;DP=377;FS=12.819;HRun=0;HaplotypeScore=126.7055;InbreedingCoeff=-0.2714;MQ=39.72;MQ0=23;MQRankSum=-1.372;QD=8.32;ReadPosRankSum=-1.258;VQSLOD=1.1707;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:15.30:0,15,212	0/1:13,0:13:4.40:330,0,4	./.	./.	./.	1/1:27,0:26:25.84:268,26,0	0/0:21,0:17:30.52:0,31,594	0/1:23,0:22:33.99:34,0,386	1/1:14,0:13:5.09:204,5,0	0/1:14,0:11:99:165,0,199	0/0:5,0:4:0:0,0,0	0/1:12,0:12:12.65:180,0,13	0/1:8,0:8:21.36:111,0,21	0/1:9,0:9:12.44:99,0,12	1/1:11,0:9:5.91:53,6,0	0/1:12,0:11:26.53:88,0,27	0/1:19,0:19:11.65:184,0,12	0/1:21,0:20:2.34:266,0,2	0/1:16,0:15:97.18:164,0,97	0/1:11,0:10:5.37:5,0,85	1/1:14,0:14:1.03:44,1,0	1/1:7,0:7:2.98:22,3,0	1/1:11,0:9:4.56:39,5,0	0/1:18,0:14:56.56:57,0,67	0/0:8,4:13:3.68:0,4,54	0/1:10,0:8:37.24:100,0,37	0/1:16,0:15:99:110,0,166	./.
chr10	82479367	.	C	CAGAGAGAGAGAG	5106.72	PASS	AB=0.982;AC=44;AF=0.917;AN=48;BaseQRankSum=0.940;DP=424;FS=0.000;HRun=0;HaplotypeScore=158.6023;InbreedingCoeff=0.1975;MQ=39.39;MQ0=21;MQRankSum=-1.804;QD=13.13;ReadPosRankSum=0.041;VQSLOD=3.5448;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:25:17.41:40,0,17	1/1:15,0:15:21.94:644,22,0	./.	0/0:7,0:3:2.99:0,3,105	1/1:16,0:13:2.99:24,3,0	1/1:29,0:28:15.01:249,15,0	0/1:23,0:19:3.65:4,0,315	1/1:27,0:26:25.90:441,26,0	1/1:16,0:15:12.51:276,13,0	1/1:15,0:13:15.05:441,15,0	1/1:7,0:7:2.78:23,3,0	1/1:11,0:11:8.90:212,9,0	1/1:11,0:11:9.11:226,9,0	1/1:11,0:10:9.03:194,9,0	./.	1/1:13,0:12:9.01:167,9,0	1/1:16,3:22:9.92:293,10,0	1/1:13,6:22:13.86:360,14,0	1/1:19,0:18:36.95:520,37,0	1/1:13,0:12:12.23:99,12,0	1/1:13,0:13:3.01:96,3,0	./.	1/1:14,0:11:4.57:55,5,0	1/1:17,0:13:5.11:108,5,0	1/1:16,0:15:9.03:147,9,0	1/1:14,0:11:13.47:252,13,0	1/1:17,0:16:17.95:238,18,0	./.
chr10	82479419	.	C	CT	4408.86	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-8.207;DP=387;FS=10.127;HRun=6;HaplotypeScore=57.9559;InbreedingCoeff=0.9853;MQ=70.80;MQ0=1;MQRankSum=1.152;QD=31.05;ReadPosRankSum=-1.046;VQSLOD=4.5839;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,16:20:48.15:603,48,0	0/0:13,0:13:36.08:0,36,367	0/0:17,0:15:30.05:0,30,298	0/0:12,0:8:17.99:0,18,165	0/0:16,0:16:36.08:0,36,367	0/0:16,0:16:36.08:0,36,367	1/1:2,14:16:39.12:491,39,0	1/1:7,31:38:93.27:1143,93,0	0/0:13,0:13:30.02:0,30,295	0/0:19,0:19:45.10:0,45,459	0/0:8,0:8:24.05:0,24,244	0/0:6,0:6:18.04:0,18,184	0/0:10,0:10:27.06:0,27,275	0/0:6,0:6:18.04:0,18,184	0/0:5,0:5:15.03:0,15,153	0/0:6,0:6:14.98:0,15,141	0/0:19,0:19:36.08:0,36,367	0/0:19,0:19:39.09:0,39,397	1/1:3,16:19:51.16:639,51,0	1/1:2,6:8:18.06:226,18,0	0/0:8,0:8:18.04:0,18,184	0/0:10,0:10:30.07:0,30,306	0/0:14,0:14:30.06:0,30,306	0/0:12,0:11:26.85:0,27,275	0/0:16,0:16:30.07:0,30,306	1/1:1,17:18:51.15:628,51,0	1/1:3,12:15:36.12:453,36,0	1/1:2,6:8:18.06:226,18,0
chr10	82481555	.	G	GCACACACACA	4992.46	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=-1.550;DP=848;FS=5.558;HRun=0;HaplotypeScore=267.5225;InbreedingCoeff=0.7550;MQ=67.32;MQ0=5;MQRankSum=-7.055;QD=21.52;ReadPosRankSum=-7.438;VQSLOD=1.9284;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:15,18:42:11.64:478,12,0	0/0:13,0:13:36.12:0,36,1026	0/0:48,0:25:0.61:0,1,485	0/1:44,0:34:24.91:25,0,645	0/0:29,0:30:66.20:0,66,1773	0/0:26,0:26:69.22:0,69,1955	1/1:5,19:31:18.06:747,18,0	1/1:32,0:32:48.16:1038,48,0	0/0:30,0:33:84.29:0,84,2292	0/0:29,0:32:86.84:0,87,2251	0/0:16,0:16:39.12:0,39,1047	0/0:27,0:27:51.23:0,51,1634	0/0:32,0:33:81.28:0,81,2430	0/0:18,0:19:45.14:0,45,1122	0/0:34,0:36:99:0,102,2875	0/0:25,0:25:63.18:0,63,1691	0/0:39,0:41:92.83:0,93,2588	0/0:32,0:32:41.86:0,42,2150	1/1:7,6:21:42.12:1173,42,0	1/1:5,13:25:21.07:666,21,0	0/0:60,0:61:99:0,162,4172	0/0:35,0:36:81.28:0,81,2328	0/0:31,0:32:75.17:0,75,1863	0/0:43,0:43:99:0,102,2634	0/0:33,0:33:73.21:0,73,2125	0/1:20,0:20:91.09:121,0,91	1/1:1,11:14:11.79:607,12,0	1/1:3,0:3:6.02:138,6,0
chr10	82482176	.	GCTTACCAGATA	G	11671.98	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.356;DP=627;FS=29.422;HRun=0;HaplotypeScore=220.7152;InbreedingCoeff=0.9823;MQ=82.50;MQ0=0;MQRankSum=-15.291;QD=77.81;ReadPosRankSum=-0.245;VQSLOD=2.8068;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,23:34:69.24:2253,69,0	0/0:11,0:11:33.11:0,33,1712	0/0:20,0:20:57.20:0,57,2783	0/0:23,0:23:60.21:0,60,2943	0/0:18,0:18:54.19:0,54,3025	0/0:21,0:21:60.21:0,60,3358	1/1:2,13:15:39.13:1343,39,0	1/1:6,18:24:57.19:1899,57,0	0/0:31,0:31:93.32:0,93,5038	0/0:24,0:24:72.24:0,72,3913	0/0:15,0:15:42.14:0,42,2022	0/0:21,0:21:63.22:0,63,3527	0/0:22,0:22:66.23:0,66,3648	0/0:33,0:33:96.31:0,96,5365	0/0:30,0:30:90.31:0,90,5188	0/0:15,0:15:42.14:0,42,2447	0/0:34,0:33:99:0,102,5676	0/0:22,0:22:66.23:0,66,3755	1/1:7,3:10:12.04:433,12,0	1/1:6,4:10:15.05:544,15,0	0/0:46,0:46:99:0,138,7483	0/0:26,0:26:75.26:0,75,3867	0/0:19,0:19:57.18:0,57,2878	0/0:28,0:28:84.29:0,84,4891	0/0:18,0:18:54.17:0,54,2852	1/1:6,19:25:60.21:2145,60,0	1/1:3,24:28:78.27:2729,78,0	1/1:0,3:3:9.03:326,9,0
chr10	82482210	.	G	GC	8158.60	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.994;DP=699;FS=3.120;HRun=1;HaplotypeScore=126.0161;InbreedingCoeff=0.9972;MQ=78.64;MQ0=0;MQRankSum=-10.698;QD=39.60;ReadPosRankSum=-4.105;VQSLOD=3.4896;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,46:52:99:1905,129,0	0/0:10,0:10:30.10:0,30,390	0/0:17,0:18:43.25:0,43,486	0/0:20,0:20:35.65:0,36,455	0/0:21,0:21:60.17:0,60,762	0/0:27,0:27:78.24:0,78,999	1/1:3,22:25:66.18:962,66,0	1/1:6,27:33:96.28:1410,96,0	0/0:29,0:29:87.27:0,87,1116	0/0:29,0:29:78.25:0,78,1013	0/0:15,0:15:42.14:0,42,545	0/0:24,0:24:69.22:0,69,896	0/0:21,0:21:63.20:0,63,818	0/0:31,0:31:90.28:0,90,1149	0/0:32,0:32:93.30:0,93,1208	0/0:21,0:21:60.20:0,60,779	0/0:32,0:32:93.30:0,93,1208	0/0:25,0:25:69.22:0,69,896	1/1:2,19:21:57.19:851,57,0	1/1:1,15:16:42.14:626,42,0	0/0:49,0:49:99:0,144,1869	0/0:17,0:17:48.15:0,48,615	0/0:20,0:20:51.13:0,51,631	0/0:32,0:32:96.31:0,96,1245	0/0:20,0:20:60.18:0,60,766	1/1:1,25:26:72.24:1078,72,0	1/1:5,22:27:75.25:1101,75,0	1/1:0,6:6:15.05:225,15,0
chr10	82483343	.	A	AC	4411.72	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-6.839;DP=576;FS=1.262;HRun=6;HaplotypeScore=85.4184;InbreedingCoeff=0.9980;MQ=85.26;MQ0=0;MQRankSum=-2.069;QD=29.02;ReadPosRankSum=-1.620;VQSLOD=4.6341;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,33:40:87.28:1094,87,0	0/0:13,0:13:36.08:0,36,367	0/0:21,0:21:50.97:0,51,481	0/0:15,0:15:30.01:0,30,285	0/0:24,0:24:66.12:0,66,660	0/0:11,0:11:33.06:0,33,329	1/1:5,22:27:57.18:717,57,0	1/1:2,16:18:48.15:604,48,0	0/0:17,0:17:48.09:0,48,482	0/0:31,0:31:84.18:0,84,856	0/0:11,0:11:30.07:0,30,305	0/0:17,0:17:42.09:0,42,428	0/0:23,0:23:66.15:0,66,672	0/0:18,0:18:48.11:0,48,490	0/0:16,0:16:48.11:0,48,487	0/0:14,0:14:42.08:0,42,420	0/0:33,0:33:96.21:0,96,978	0/0:22,0:22:54.09:0,54,540	1/1:8,16:24:48.13:589,48,0	1/1:1,17:19:54:655,54,0	0/0:31,0:31:78.16:0,78,791	0/0:17,0:17:48.08:0,48,481	0/0:16,0:16:48.11:0,48,488	0/0:24,0:24:72.16:0,72,732	0/0:23,0:23:63.14:0,63,642	0/0:20,0:20:57.12:0,57,575	1/1:2,21:23:60.19:754,60,0	0/0:7,0:7:18.04:0,18,184
chr10	82484472	.	AC	A	5151.20	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-1.406;DP=639;FS=1.667;HRun=1;HaplotypeScore=93.0105;InbreedingCoeff=0.9997;MQ=73.06;MQ0=0;MQRankSum=-1.857;QD=35.28;ReadPosRankSum=-2.233;VQSLOD=4.1538;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:51.17:713,51,0	0/0:11,0:11:33.09:0,33,472	0/0:37,0:37:99:0,105,1463	0/0:23,0:23:61.76:0,62,986	0/0:17,0:17:48.16:0,48,738	0/0:18,0:18:54.17:0,54,813	1/1:0,19:19:51.17:713,51,0	1/1:1,26:27:78.26:1089,78,0	0/0:24,0:24:72.22:0,72,1096	0/0:18,0:18:54.16:0,54,802	0/0:18,0:18:54.17:0,54,812	0/0:18,0:18:51.15:0,51,754	0/0:20,0:20:57.15:0,57,839	0/0:25,0:25:75.26:0,75,1168	0/0:25,0:25:72.23:0,72,1099	0/0:24,0:24:69.23:0,69,1076	0/0:34,0:34:99:0,102,1568	0/0:27,0:27:81.28:0,81,1258	1/1:1,18:18:51.05:641,51,0	1/1:2,18:20:57.18:781,57,0	0/0:37,0:37:99:0,111,1642	0/0:22,0:22:63.20:0,63,961	0/0:16,0:16:45.15:0,45,703	0/0:33,0:33:99:0,99,1542	0/0:15,0:15:45.15:0,45,701	0/0:22,0:22:60.19:0,60,896	1/1:0,35:35:87.21:1215,87,0	0/0:9,0:9:27.09:0,27,421
chr10	82485175	.	G	GCT	820.33	PASS	AB=0.931;AC=46;AF=0.920;AN=50;BaseQRankSum=1.652;DP=633;FS=14.111;HRun=0;HaplotypeScore=182.5289;InbreedingCoeff=0.1363;MQ=62.44;MQ0=18;MQRankSum=-1.443;QD=1.49;ReadPosRankSum=-2.070;VQSLOD=1.6218;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:30:8.40:70,8,0	1/1:15,0:15:3:25,3,0	./.	./.	1/1:23,0:22:2.99:29,3,0	1/1:25,0:24:0.47:1,0,0	1/1:11,1:16:3:26,3,0	1/1:25,0:23:2.98:21,3,0	1/1:27,0:26:2.98:25,3,0	1/1:27,0:25:14.62:106,15,0	1/1:15,0:15:2.99:23,3,0	1/1:19,0:17:2.98:23,3,0	1/1:19,0:18:6.44:47,6,0	1/1:21,0:21:5.96:45,6,0	1/1:17,0:16:5.98:46,6,0	1/1:28,0:27:6:57,6,0	1/1:30,0:29:11.63:75,12,0	1/1:12,0:11:11.90:96,12,0	1/1:20,0:20:0.05:0,0,0	1/1:23,0:23:3.01:43,3,0	1/1:16,0:15:3.01:42,3,0	1/1:30,0:29:2.99:24,3,0	0/1:25,0:23:0:0,0,0	1/1:26,0:25:3.01:35,3,0	1/1:29,0:29:2.98:24,3,0	0/0:16,0:19:5.68:0,6,28	0/1:26,5:28:34.97:35,0,55	./.
chr10	82485208	.	C	CTT	3163.13	PASS	AB=0.946;AC=21;AF=0.375;AN=56;BaseQRankSum=2.134;DP=631;FS=7.637;HRun=1;HaplotypeScore=107.9176;InbreedingCoeff=-0.0902;MQ=55.83;MQ0=16;MQRankSum=-0.426;QD=8.28;ReadPosRankSum=-0.626;VQSLOD=-0.2588;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:41.11:0,41,325	0/1:8,0:8:24.24:26,0,24	0/0:19,0:11:17.61:0,18,144	0/0:43,0:16:26.04:0,26,275	0/1:25,0:24:3.42:299,0,3	0/1:25,0:24:9.05:284,0,9	0/0:22,0:22:31.56:0,32,242	0/0:23,0:21:59.95:0,60,538	0/1:26,0:26:99:169,0,162	0/1:10,17:27:99:296,0,100	1/1:4,16:21:26.71:195,27,0	0/1:17,0:15:11.05:110,0,11	0/1:18,0:17:37.96:188,0,38	0/1:16,0:16:20.01:77,0,20	0/1:20,1:20:46.80:234,0,47	0/1:25,0:25:57.70:137,0,58	0/1:29,0:29:43.30:314,0,43	0/1:15,0:15:71.24:71,0,125	0/0:17,0:17:47.56:0,48,374	0/0:26,0:25:42.63:0,43,446	0/1:10,0:9:5.59:109,0,6	1/1:25,0:24:4.28:368,4,0	1/1:16,0:14:29.75:217,30,0	0/1:27,0:26:9.33:215,0,9	0/1:12,16:29:27.54:28,0,29	0/0:22,0:22:59.27:0,59,499	0/0:29,0:27:36.28:0,36,425	0/0:14,0:13:38.92:0,39,316
chr10	82485360	.	A	AG	15887.21	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-3.872;DP=636;FS=1.742;HRun=2;HaplotypeScore=73.3805;InbreedingCoeff=0.9993;MQ=83.50;MQ0=0;MQRankSum=-2.784;QD=40.12;ReadPosRankSum=3.477;VQSLOD=5.3190;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,1369	1/1:0,10:10:21.07:315,21,0	0/0:21,0:21:54.14:0,54,655	0/0:32,0:32:81.21:0,81,1001	1/1:1,21:22:57.19:854,57,0	1/1:1,25:26:63.21:942,63,0	0/0:14,0:14:42.09:0,42,525	0/0:25,0:25:72.23:0,72,934	1/1:0,23:23:69.23:1034,69,0	1/1:2,22:24:66.22:989,66,0	1/1:0,17:17:39.13:582,39,0	1/1:2,21:23:57.19:847,57,0	1/1:1,17:18:54.18:803,54,0	1/1:0,17:17:48.16:715,48,0	1/1:0,22:22:63.21:942,63,0	1/1:0,14:14:39.13:584,39,0	1/1:0,26:26:75.25:1124,75,0	1/1:0,10:10:30.10:448,30,0	0/0:18,0:18:51.17:0,51,661	0/0:24,0:24:69.22:0,69,890	1/1:3,34:37:99:1484,99,0	1/1:0,29:29:81.27:1212,81,0	1/1:0,23:23:60.20:899,60,0	1/1:2,31:33:84.28:1259,84,0	1/1:1,21:22:57.19:854,57,0	0/0:25,0:25:75.23:0,75,960	0/0:28,0:28:81.25:0,81,1034	0/0:14,0:14:42.14:0,42,545
chr10	82485955	.	GAA	G	9723.11	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=4.800;DP=584;FS=10.941;HRun=10;HaplotypeScore=117.4484;InbreedingCoeff=0.9762;MQ=74.08;MQ0=0;MQRankSum=-2.887;QD=25.65;ReadPosRankSum=6.722;VQSLOD=3.1491;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:35:80.59:0,81,305	1/1:1,11:12:26.83:301,27,0	0/0:21,0:21:36.05:0,36,463	0/0:13,0:12:26.94:0,27,333	1/1:4,14:18:35.25:383,35,0	1/1:3,9:12:27.05:298,27,0	0/0:6,0:23:41.45:0,41,213	0/0:6,0:24:37.04:0,37,153	1/1:3,35:38:99:1104,99,0	1/1:7,20:27:60.12:652,60,0	1/1:5,8:13:21.04:234,21,0	1/1:1,24:25:63.14:702,63,0	1/1:1,19:20:51.14:568,51,0	1/1:1,17:18:45.12:502,45,0	1/1:5,22:27:60.13:669,60,0	1/1:4,15:19:36.09:402,36,0	1/1:3,29:32:81.22:902,81,0	1/1:5,19:24:48.11:535,48,0	0/0:2,0:19:38.02:0,38,162	0/0:7,0:25:47.21:0,47,211	1/1:1,19:20:42.11:468,42,0	1/1:2,10:12:27.07:298,27,0	1/1:3,13:16:30.07:334,30,0	1/1:2,31:33:87.16:970,87,0	1/1:1,12:13:36.10:401,36,0	0/0:2,0:17:40.78:0,41,162	0/0:3,0:23:49.63:0,50,171	0/0:0,0:5:3.95:0,4,20
chr10	82487501	.	T	TGCGCTCTCTCTC	13004.87	PASS	AB=0.971;AC=38;AF=0.679;AN=56;BaseQRankSum=4.952;DP=590;FS=19.595;HRun=0;HaplotypeScore=247.9947;InbreedingCoeff=0.7504;MQ=70.33;MQ0=12;MQRankSum=-4.508;QD=35.24;ReadPosRankSum=3.371;VQSLOD=2.4507;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:6.47:0,6,234	1/1:13,1:16:41.92:853,42,0	0/0:49,0:20:14.75:0,15,463	0/0:51,0:25:37.11:0,37,561	1/1:15,0:17:30:491,30,0	1/1:16,5:23:36.12:1067,36,0	0/0:22,0:22:23.99:0,24,301	0/0:35,0:34:22.91:0,23,1075	1/1:12,2:15:27.08:700,27,0	1/1:14,5:20:60.09:1958,60,0	1/1:14,1:16:30.09:522,30,0	1/1:16,0:16:11.99:270,12,0	1/1:11,0:12:27.54:449,28,0	1/1:10,1:13:21.06:481,21,0	1/1:25,2:28:36.30:772,36,0	1/1:12,4:18:32.71:828,33,0	1/1:11,3:17:38.98:1083,39,0	1/1:17,2:19:42.05:817,42,0	0/1:18,0:18:26.81:27,0,524	0/0:13,0:13:8.80:0,9,126	1/1:28,1:29:50.25:882,50,0	1/1:12,2:15:17.72:387,18,0	1/1:16,1:18:35.64:626,36,0	1/1:21,1:22:19.65:323,20,0	1/1:17,1:18:20.80:300,21,0	0/1:15,0:16:99:168,0,307	0/0:20,0:20:0.74:0,1,379	0/0:6,0:6:11.18:0,11,120
chr10	82487529	.	C	CTG	2374.75	PASS	AB=0.978;AC=26;AF=0.464;AN=56;BaseQRankSum=6.484;DP=621;FS=9.308;HRun=0;HaplotypeScore=231.9785;InbreedingCoeff=0.1105;MQ=46.41;MQ0=13;MQRankSum=2.265;QD=6.18;ReadPosRankSum=4.874;VQSLOD=1.2913;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:24:4.65:5,0,64	0/1:13,0:13:33.03:98,0,33	0/0:34,0:13:23.08:0,23,214	0/0:42,0:14:26.18:0,26,237	0/1:23,0:24:58.32:89,0,58	0/1:27,0:28:66.46:127,0,66	0/0:35,0:35:35.35:0,35,291	0/0:32,0:31:60.14:0,60,527	0/1:17,0:17:4.12:112,0,4	0/1:26,0:25:33.49:337,0,33	0/1:16,0:16:15.27:53,0,15	0/1:23,1:24:11.97:227,0,12	0/1:11,0:12:45.49:52,0,45	1/1:15,0:16:10.22:177,10,0	1/1:27,0:27:6.02:184,6,0	1/1:17,0:18:9.56:157,10,0	0/1:18,0:18:25.50:156,0,26	1/1:22,0:22:21.83:263,22,0	0/1:18,0:18:31.08:31,0,170	0/0:18,0:18:23.02:0,23,170	0/0:17,0:17:7.35:0,7,47	0/1:19,0:19:2.61:113,0,3	1/1:14,5:19:6.70:250,7,0	1/1:19,1:20:2.58:24,3,0	1/1:20,0:20:6.68:100,7,0	0/0:32,0:32:54.72:0,55,548	0/0:17,0:17:19.19:0,19,230	0/0:9,0:9:11.70:0,12,71
chr10	82487531	.	CTG	C	1440.54	PASS	AB=0.993;AC=21;AF=0.375;AN=56;BaseQRankSum=-10.831;DP=614;FS=20.273;HRun=0;HaplotypeScore=235.4903;InbreedingCoeff=-0.0109;MQ=46.61;MQ0=10;MQRankSum=-0.081;QD=3.81;ReadPosRankSum=-5.949;VQSLOD=0.0213;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:8.19:85,8,0	0/1:13,0:13:13.59:14,0,187	0/0:34,0:13:32.16:0,32,258	0/1:36,1:15:61.16:61,0,85	0/1:24,0:23:22.16:22,0,115	0/0:27,0:27:4.99:0,5,175	1/1:36,0:36:32.37:266,32,0	0/1:31,0:31:4.27:399,0,4	0/0:15,0:15:1.48:0,1,165	0/1:25,0:25:80.10:80,0,415	0/1:14,1:15:39:39,0,40	0/0:27,0:26:33.61:0,34,372	0/1:14,0:14:1.44:1,0,268	0/0:15,0:15:15.79:0,16,254	0/1:28,0:28:53.81:54,0,192	0/0:19,0:19:8.40:0,8,220	0/1:18,0:18:9.73:10,0,208	0/0:22,0:22:27.91:0,28,378	0/1:17,0:17:36.13:113,0,36	1/1:14,7:21:29.08:229,29,0	0/1:17,0:17:5.15:5,0,132	0/0:19,0:19:22.49:0,22,164	0/0:19,1:20:7.29:0,7,199	0/0:19,0:19:1.93:0,2,55	0/0:19,0:19:20.64:0,21,240	0/1:32,0:32:27.02:27,0,669	1/1:15,0:15:22.96:182,23,0	0/1:9,0:9:23.98:24,0,74
chr10	82487566	.	A	AT	8651.66	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=6.355;DP=546;FS=5.341;HRun=0;HaplotypeScore=178.5827;InbreedingCoeff=0.9488;MQ=58.83;MQ0=6;MQRankSum=-2.110;QD=29.43;ReadPosRankSum=9.787;VQSLOD=3.4586;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:17.85:0,18,214	1/1:3,3:6:9.03:144,9,0	0/0:44,0:22:31.85:0,32,642	0/0:56,1:41:99:0,104,1308	1/1:2,19:21:20.23:419,20,0	1/1:5,15:20:18.44:393,18,0	0/0:19,0:19:45.12:0,45,627	0/0:36,0:36:99:0,105,1419	1/1:2,13:15:23.18:466,23,0	1/1:3,16:19:54.15:806,54,0	1/1:3,11:14:20.12:376,20,0	1/1:0,22:22:48.89:775,49,0	1/1:1,13:14:39.13:611,39,0	1/1:0,14:14:28.45:518,28,0	1/1:2,25:27:47.87:893,48,0	1/1:4,13:17:20.69:421,21,0	1/1:2,10:12:26.31:473,26,0	1/1:0,12:12:30.94:524,31,0	0/0:13,0:13:33.10:0,33,436	0/0:25,0:25:56.58:0,57,794	1/1:0,12:12:12.58:227,13,0	1/1:2,14:16:21.07:327,21,0	1/1:2,18:20:29.96:608,30,0	1/1:1,17:18:8.75:144,9,0	1/1:2,13:15:33.11:528,33,0	0/0:20,1:21:9.55:0,10,658	0/0:17,0:17:45.15:0,45,624	0/0:5,0:5:6.02:0,6,72
chr10	82487575	.	TCATCATCAC	T	1078.62	PASS	AB=0.929;AC=8;AF=0.143;AN=56;BaseQRankSum=-1.109;DP=571;FS=2.098;HRun=0;HaplotypeScore=263.9734;InbreedingCoeff=0.0499;MQ=57.87;MQ0=7;MQRankSum=-3.189;QD=9.38;ReadPosRankSum=-4.338;VQSLOD=1.7712;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:26.98:0,27,926	0/1:8,0:8:9.12:9,0,372	0/0:52,0:23:2.32:0,2,680	0/0:52,0:37:42.75:0,43,1046	0/0:23,0:23:8.38:0,8,790	0/1:20,0:20:41.28:41,0,860	0/0:18,0:18:42.07:0,42,1056	0/0:41,0:41:90.26:0,90,2657	0/0:15,0:15:8.94:0,9,1058	0/0:21,0:21:54.17:0,54,1626	0/0:17,0:17:24.15:0,24,952	0/0:21,0:21:10.85:0,11,1216	0/0:13,0:13:36.11:0,36,1069	0/0:14,0:14:24.01:0,24,1015	0/0:30,0:30:3.77:0,4,1445	0/1:16,0:16:5.10:5,0,811	0/0:13,0:13:33.04:0,33,904	0/0:15,0:15:26.67:0,27,1051	0/0:14,0:14:33.11:0,33,1185	0/0:26,0:26:63:0,63,2195	0/0:12,0:12:13.81:0,14,262	0/0:15,0:15:20.74:0,21,690	0/1:24,0:24:7.89:8,0,1088	0/1:20,0:20:20:20,0,185	0/0:14,0:14:23.95:0,24,564	0/1:5,15:20:60.86:951,0,61	0/0:16,0:16:48.15:0,48,2017	1/1:2,5:7:6.02:171,6,0
chr10	82487581	.	TCAC	T	263.47	PASS	AB=0.978;AC=14;AF=0.250;AN=56;BaseQRankSum=1.798;DP=561;FS=0.542;HRun=0;HaplotypeScore=208.5720;InbreedingCoeff=-0.0956;MQ=56.24;MQ0=7;MQRankSum=-2.971;QD=1.19;ReadPosRankSum=-5.747;VQSLOD=1.0771;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:32.95:0,33,527	0/1:7,0:7:13.19:13,0,168	0/0:48,0:21:29.90:0,30,658	0/0:49,0:33:76.35:0,76,1213	0/1:22,0:22:3.15:3,0,441	0/1:18,0:18:65.18:65,0,407	0/0:20,0:20:57.06:0,57,988	0/0:42,0:42:99:0,126,2161	0/1:14,1:15:6.50:7,0,520	0/0:19,1:20:18.72:0,19,929	0/1:17,1:18:8.16:8,0,425	0/0:19,0:19:18.10:0,18,686	0/0:12,0:12:36.12:0,36,632	0/0:14,0:14:24.03:0,24,594	0/1:29,1:30:3.53:4,0,814	0/1:15,0:15:2.59:3,0,401	0/0:13,0:13:35.48:0,35,601	0/0:15,0:15:12.75:0,13,585	0/0:15,0:15:41.75:0,42,619	0/0:28,0:28:69.07:0,69,1355	0/1:11,1:12:18.53:19,0,139	0/1:15,0:15:4.07:4,0,336	0/1:24,1:25:1.18:1,0,663	0/1:20,0:20:20.67:21,0,133	0/0:13,0:13:31.77:0,32,428	0/1:20,0:20:94.37:214,0,94	0/0:16,0:16:48.15:0,48,1034	1/1:5,0:5:5.95:42,6,0
chr10	82487590	.	T	TCAC	9928.98	PASS	AB=0.952;AC=37;AF=0.661;AN=56;BaseQRankSum=11.281;DP=545;FS=7.913;HRun=0;HaplotypeScore=157.9017;InbreedingCoeff=0.8970;MQ=53.93;MQ0=7;MQRankSum=-0.067;QD=30.64;ReadPosRankSum=0.404;VQSLOD=4.8308;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:36.10:0,36,522	1/1:3,3:6:15.04:239,15,0	0/0:41,0:15:26.12:0,26,317	0/0:37,0:23:41.86:0,42,440	1/1:18,7:25:39.94:552,40,0	1/1:11,7:18:45.12:741,45,0	0/0:19,0:19:45.05:0,45,575	0/0:39,0:39:99:0,102,1434	1/1:9,6:15:36.11:637,36,0	1/1:17,6:22:59.97:948,60,0	1/1:15,6:22:38.59:669,39,0	1/1:9,7:16:41.94:699,42,0	1/1:9,5:14:36.06:592,36,0	1/1:7,6:13:33.04:509,33,0	1/1:15,11:26:57.07:920,57,0	1/1:6,5:11:27.07:462,27,0	1/1:11,4:15:35.92:481,36,0	1/1:11,3:14:39.08:619,39,0	0/0:15,0:15:45.01:0,45,580	0/0:30,0:30:69.12:0,69,956	1/1:9,1:10:11.84:197,12,0	1/1:15,1:16:30.02:469,30,0	1/1:18,7:25:41.99:623,42,0	1/1:16,4:20:18.01:275,18,0	1/1:15,0:15:23.72:279,24,0	0/1:19,1:20:15.17:15,0,323	0/0:19,0:19:54.15:0,54,811	0/0:5,0:5:5.98:0,6,46
chr10	82487796	.	AAGGG	A	5984.84	PASS	AB=0.997;AC=33;AF=0.589;AN=56;BaseQRankSum=-9.077;DP=663;FS=19.981;HRun=0;HaplotypeScore=221.0126;InbreedingCoeff=-0.3746;MQ=40.32;MQ0=6;MQRankSum=3.011;QD=9.40;ReadPosRankSum=-11.131;VQSLOD=0.7095;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:31:27.05:326,0,27	0/1:10,0:10:14.49:75,0,14	0/0:12,0:7:14.99:0,15,178	0/0:14,0:8:20.54:0,21,359	1/1:36,1:35:4.67:284,5,0	0/1:23,0:23:29.85:204,0,30	1/1:16,0:15:11.83:130,12,0	1/1:55,0:53:99:665,108,0	0/1:20,0:20:42.06:144,0,42	0/1:32,0:32:25.61:306,0,26	0/1:18,0:18:11.99:72,0,12	0/1:19,0:19:65.88:127,0,66	0/1:16,0:15:15.04:75,0,15	0/1:14,0:13:2.24:78,0,2	1/1:28,0:27:39.46:322,39,0	1/1:16,0:16:31.31:189,31,0	0/1:24,0:24:60.25:101,0,60	0/1:15,0:15:14.82:131,0,15	1/1:31,1:31:43.27:392,43,0	0/1:31,2:33:99:411,0,99	1/1:8,0:8:6.06:46,6,0	0/1:36,0:36:99:378,0,103	0/1:18,0:18:0.21:198,0,0	0/1:29,0:28:55.29:167,0,55	0/1:27,0:27:44.59:225,0,45	0/1:32,0:32:99:342,0,181	0/1:30,0:30:12.07:481,0,12	0/1:17,0:17:99:116,0,213
chr10	82487832	.	A	AC	1527.12	PASS	AB=0.771;AC=6;AF=0.107;AN=56;BaseQRankSum=4.664;DP=589;FS=7.345;HRun=0;HaplotypeScore=223.4257;InbreedingCoeff=-0.1209;MQ=39.53;MQ0=3;MQRankSum=-6.791;QD=9.43;ReadPosRankSum=1.669;VQSLOD=2.9565;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,11:29:99:231,0,507	0/0:9,0:9:27.09:0,27,361	0/0:23,0:14:36.12:0,36,498	0/0:15,0:10:30.09:0,30,395	0/0:36,0:35:72.71:0,73,1091	0/0:18,0:18:52.65:0,53,647	0/1:6,6:13:88.31:223,0,88	0/1:34,5:40:99:183,0,987	0/0:18,0:18:43.93:0,44,599	0/0:20,0:19:54.17:0,54,703	0/0:14,0:14:16.33:0,16,234	0/0:16,0:16:27.14:0,27,419	0/0:17,0:16:39.13:0,39,517	0/0:11,0:11:27.09:0,27,357	0/0:25,0:25:73.57:0,74,883	0/0:15,0:15:40.34:0,40,497	0/0:16,0:16:30.62:0,31,377	0/0:16,0:16:36:0,36,496	0/1:17,3:19:99:100,0,500	0/1:21,7:29:99:261,0,530	0/0:7,0:7:20.26:0,20,196	0/0:30,0:30:35.61:0,36,901	0/0:17,0:16:42.50:0,43,545	0/0:28,0:27:53.18:0,53,786	0/0:23,0:23:42.95:0,43,685	0/0:36,0:36:99:0,100,1340	0/1:13,16:30:99:653,0,254	0/0:17,0:17:51.17:0,51,713
chr10	82487863	.	A	AT	8939.73	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=7.788;DP=563;FS=18.553;HRun=8;HaplotypeScore=169.1724;InbreedingCoeff=0.9975;MQ=67.26;MQ0=1;MQRankSum=-2.037;QD=25.62;ReadPosRankSum=5.679;VQSLOD=3.0290;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:45.01:0,45,412	1/1:2,8:10:24.07:277,24,0	0/0:18,0:18:36:0,36,324	0/0:19,0:19:48:0,48,437	1/1:8,29:37:78.20:885,78,0	1/1:2,21:23:51.15:588,51,0	0/0:11,0:11:24:0,24,220	0/0:36,0:36:84.03:0,84,767	1/1:1,15:16:45.13:519,45,0	1/1:7,15:22:48.14:553,48,0	1/1:1,11:12:27.04:297,27,0	1/1:1,12:13:36.10:407,36,0	1/1:3,13:16:39.59:449,40,0	1/1:4,10:14:24.07:277,24,0	1/1:3,22:25:51.12:574,51,0	1/1:2,13:15:33.10:381,33,0	1/1:1,17:18:20.64:477,21,0	1/1:1,18:19:51.15:588,51,0	0/0:12,0:11:21:0,21,192	0/0:18,0:18:42.02:0,42,384	1/1:0,11:11:33.06:366,33,0	1/1:6,24:30:66.03:702,66,0	1/1:1,17:18:45.09:504,45,0	1/1:9,18:26:49.34:542,49,0	1/1:3,20:23:48.14:553,48,0	0/0:26,1:27:40.41:0,40,624	0/0:37,0:37:99:0,105,955	0/0:17,0:17:42.01:0,42,384
chr10	82490325	.	CG	C	11845.27	PASS	AC=54;AF=1.000;AN=54;DP=339;FS=0.000;HRun=1;HaplotypeScore=248.1744;InbreedingCoeff=-0.0132;MQ=31.81;MQ0=0;QD=34.94;VQSLOD=3.9520;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:24.08:329,24,0	1/1:0,8:8:21.07:293,21,0	1/1:0,1:1:3.01:42,3,0	./.	1/1:0,9:9:18.06:245,18,0	1/1:0,21:21:57.19:791,57,0	1/1:0,16:16:30.10:418,30,0	1/1:0,19:19:48.16:670,48,0	1/1:0,13:13:36.12:502,36,0	1/1:0,9:9:27.09:375,27,0	1/1:0,7:7:18.06:251,18,0	1/1:0,14:14:42.14:586,42,0	1/1:0,12:12:36.12:500,36,0	1/1:0,14:14:39.13:541,39,0	1/1:0,12:12:30.10:414,30,0	1/1:0,19:18:54.18:753,54,0	1/1:0,11:11:33.11:460,33,0	1/1:0,8:7:18.06:249,18,0	1/1:0,12:12:33.11:460,33,0	1/1:0,11:11:33.11:460,33,0	1/1:0,26:26:62.90:856,63,0	1/1:0,8:8:18.06:248,18,0	1/1:0,10:10:24.08:332,24,0	1/1:0,9:9:6.02:80,6,0	1/1:0,13:13:33.11:460,33,0	1/1:1,18:19:48.15:654,48,0	1/1:0,22:22:54.18:747,54,0	1/1:2,3:5:9.85:127,10,0
chr10	82490511	.	CA	C	3143.22	PASS	AB=0.775;AC=36;AF=0.643;AN=56;BaseQRankSum=-2.840;DP=332;FS=2.407;HRun=12;HaplotypeScore=73.5417;InbreedingCoeff=0.8079;MQ=49.04;MQ0=23;MQRankSum=-1.667;QD=14.42;ReadPosRankSum=4.728;VQSLOD=4.3875;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,1:28:39.71:0,40,308	1/1:1,3:4:8.89:64,9,0	0/1:13,0:4:8.33:8,0,62	0/0:10,0:5:10.94:0,11,70	1/1:4,9:13:3.64:146,4,0	1/1:1,9:11:22.95:168,23,0	0/0:1,0:11:25.75:0,26,134	0/0:8,0:12:26.27:0,26,179	1/1:1,9:9:20.90:162,21,0	1/1:5,7:10:20.86:162,21,0	1/1:0,8:9:19.95:145,20,0	1/1:0,4:4:11.95:93,12,0	1/1:0,5:6:16.98:121,17,0	1/1:2,5:6:16.98:122,17,0	1/1:0,4:6:13.03:81,13,0	0/1:2,9:11:0.55:179,0,1	1/1:3,23:25:26.91:466,27,0	1/1:2,8:9:3.34:142,3,0	0/0:4,0:6:14.50:0,15,95	0/0:4,0:9:23.24:0,23,152	1/1:1,17:17:14.39:294,14,0	1/1:3,11:14:29.43:231,29,0	1/1:2,16:17:41.84:325,42,0	1/1:1,13:14:35.86:279,36,0	1/1:1,8:7:20.92:162,21,0	0/0:1,0:11:31.82:0,32,181	0/0:1,0:8:20.02:0,20,103	0/0:4,0:10:22.86:0,23,121
chr10	82498135	.	G	GTGTG	3080.99	PASS	AB=1.000;AC=47;AF=0.940;AN=50;BaseQRankSum=-0.672;DP=592;FS=6.349;HRun=0;HaplotypeScore=82.8347;InbreedingCoeff=0.0005;MQ=53.48;MQ0=30;MQRankSum=-0.962;QD=6.24;ReadPosRankSum=-1.506;VQSLOD=0.8181;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:5,0:5:3.01:70,3,0	./.	./.	1/1:21,0:21:12.02:228,12,0	1/1:24,0:23:12.04:282,12,0	1/1:13,0:13:2.82:60,3,0	0/1:26,0:22:0:0,0,0	1/1:28,0:27:12.25:210,12,0	1/1:25,0:24:27.01:346,27,0	1/1:4,0:4:3.01:42,3,0	0/1:12,0:11:34.59:141,0,35	1/1:14,0:14:6.02:108,6,0	1/1:13,0:13:6.02:141,6,0	1/1:22,0:22:2.40:51,2,0	1/1:11,0:11:2.74:12,3,0	1/1:40,0:39:14.99:236,15,0	0/1:19,0:19:6.44:6,0,41	1/1:23,0:23:7.83:113,8,0	1/1:19,0:19:5.60:110,6,0	1/1:45,0:45:8.99:161,9,0	1/1:16,0:16:5.91:86,6,0	1/1:8,0:7:2.99:24,3,0	1/1:34,0:34:18.06:422,18,0	1/1:14,0:14:6.01:68,6,0	1/1:25,0:22:4.82:33,5,0	1/1:16,0:16:3.01:53,3,0	1/1:12,4:16:14.50:174,14,0
chr10	82500008	.	AC	A	1477.05	PASS	AB=0.830;AC=26;AF=0.464;AN=56;BaseQRankSum=2.509;DP=629;FS=6.515;HRun=2;HaplotypeScore=113.9631;InbreedingCoeff=-0.1350;MQ=25.63;MQ0=90;MQRankSum=-1.134;QD=3.41;ReadPosRankSum=-0.088;VQSLOD=0.0641;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,4:14:2.26:0,2,16	1/1:7,2:7:7.13:56,7,0	0/0:27,1:4:12.04:0,12,161	0/0:45,0:4:6.01:0,6,71	0/0:21,4:24:0:0,0,0	0/1:21,6:24:45.12:85,0,45	0/1:20,8:18:35.98:45,0,36	0/1:28,10:24:31.63:331,0,32	0/1:19,5:17:15.60:16,0,35	0/1:35,4:33:99:183,0,345	0/0:18,6:21:0:0,0,1	0/1:18,5:15:25.54:26,0,30	0/1:10,2:8:48.81:53,0,49	0/1:22,4:21:9.84:15,0,10	0/1:21,5:21:47.77:48,0,49	0/1:13,3:12:25.10:70,0,25	0/1:8,3:11:21.78:69,0,22	1/1:7,1:6:8.14:84,8,0	0/1:16,2:12:31.65:95,0,32	1/1:14,6:18:7.41:77,7,0	0/0:24,5:12:2.98:0,3,21	1/1:26,4:24:5.77:91,6,0	0/1:16,5:18:30.63:60,0,31	0/1:12,4:13:0:0,0,0	1/1:17,6:20:2.20:64,2,0	0/0:17,0:13:34.66:0,35,456	1/1:14,3:12:17.34:168,17,0	0/0:11,0:9:24.08:0,24,341
chr10	82500009	.	C	CA	1666.05	PASS	AB=0.918;AC=28;AF=0.500;AN=56;BaseQRankSum=2.527;DP=619;FS=3.129;HRun=1;HaplotypeScore=113.5271;InbreedingCoeff=-0.0941;MQ=25.37;MQ0=91;MQRankSum=-0.407;QD=3.50;ReadPosRankSum=-0.510;VQSLOD=-0.0296;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,1:12:2.63:0,3,16	1/1:8,1:7:7.21:57,7,0	0/0:29,0:4:12.04:0,12,154	0/0:43,0:3:6.01:0,6,68	0/1:24,2:24:0:0,0,0	0/1:24,4:25:53.90:89,0,54	0/1:25,1:18:34.63:71,0,35	0/1:35,1:22:81.92:250,0,82	0/1:22,2:17:34.66:35,0,35	0/1:35,2:32:99:216,0,308	0/1:22,2:21:0:0,0,1	0/1:19,3:15:25.97:26,0,33	0/1:11,1:8:15:59,0,15	0/1:22,3:21:8.62:18,0,9	0/1:24,1:20:42.31:65,0,42	0/1:14,2:12:9.67:86,0,10	0/1:7,2:9:12.34:72,0,12	1/1:5,1:5:8.77:102,9,0	0/1:17,0:11:30.93:74,0,31	1/1:18,3:20:7.52:128,8,0	0/0:28,1:12:2.98:0,3,21	1/1:26,2:23:11.86:125,12,0	0/1:21,0:17:28.61:60,0,29	0/1:16,2:15:0.01:0,0,0	1/1:22,1:20:8.06:86,8,0	0/0:17,0:12:33.09:0,33,434	1/1:12,3:10:13.44:207,13,0	0/0:11,0:9:24.08:0,24,327
chr10	82500013	.	AC	A	1431.64	PASS	AB=0.835;AC=29;AF=0.518;AN=56;BaseQRankSum=2.533;DP=629;FS=4.019;HRun=2;HaplotypeScore=114.2797;InbreedingCoeff=-0.0415;MQ=25.50;MQ0=92;MQRankSum=-0.122;QD=3.16;ReadPosRankSum=-0.272;VQSLOD=0.1161;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,4:13:0.01:1,0,0	1/1:7,2:8:8.99:79,9,0	0/0:29,0:4:12.04:0,12,152	0/0:40,1:1:3.01:0,3,39	0/1:23,3:24:0:0,0,0	0/1:21,7:25:59.72:60,0,68	0/1:21,7:18:33.16:49,0,33	0/1:29,8:23:99:279,0,110	0/0:18,4:17:0.48:0,0,42	0/1:34,6:34:99:212,0,298	0/0:20,5:21:0:0,0,1	0/1:16,7:15:24.80:47,0,25	1/1:12,0:8:3.58:58,4,0	0/1:25,1:21:9.41:16,0,9	0/1:19,4:18:3.78:4,0,56	0/1:13,4:13:45.43:89,0,45	0/1:8,3:11:49.58:50,0,92	1/1:8,2:7:8.25:87,8,0	0/1:14,4:11:29.78:99,0,30	1/1:12,9:19:7.81:73,8,0	0/0:26,3:12:2.22:0,2,7	1/1:27,3:24:0.35:80,0,0	0/1:19,3:18:22.11:59,0,22	1/1:16,3:16:1.26:4,1,0	1/1:16,7:20:8.97:80,9,0	0/0:19,0:14:41.11:0,41,534	1/1:9,6:10:9.11:158,9,0	0/0:11,0:9:24.08:0,24,337
chr10	82500014	.	C	CA	1730.88	PASS	AB=0.890;AC=29;AF=0.537;AN=54;BaseQRankSum=2.585;DP=636;FS=2.962;HRun=1;HaplotypeScore=120.5979;InbreedingCoeff=-0.0517;MQ=25.51;MQ0=92;MQRankSum=0.386;QD=3.76;ReadPosRankSum=-0.270;VQSLOD=0.1875;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,3:13:0.46:1,0,0	1/1:8,1:8:9.02:104,9,0	0/0:30,0:4:12.04:0,12,152	0/0:38,0:1:3.01:0,3,39	./.	0/1:24,4:25:65.76:107,0,66	0/1:24,3:17:34.01:40,0,34	0/1:38,1:25:99:315,0,116	0/0:20,2:17:6.10:0,6,50	0/1:39,2:34:99:232,0,282	0/1:23,3:21:0:0,0,1	0/1:17,6:15:24.52:70,0,25	1/1:12,1:9:4.25:58,4,0	0/1:23,3:21:8.16:31,0,8	0/1:20,3:18:22.04:22,0,49	0/1:11,6:13:43.45:110,0,43	0/1:10,1:11:66.72:67,0,93	1/1:8,2:7:8.78:109,9,0	0/1:19,0:13:32.91:100,0,33	1/1:19,2:18:8.25:63,8,0	0/0:23,6:12:2.22:0,2,7	0/1:25,5:24:1.91:73,0,2	0/1:20,3:19:21.82:59,0,22	1/1:13,6:16:1.39:4,1,0	1/1:18,6:21:9.01:100,9,0	0/0:19,0:14:41.11:0,41,510	1/1:15,1:11:18.37:223,18,0	0/0:11,0:9:24.08:0,24,325
chr10	82500043	.	C	CA	2423.92	PASS	AB=0.822;AC=31;AF=0.574;AN=54;BaseQRankSum=-0.378;DP=502;FS=95.173;HRun=1;HaplotypeScore=89.9286;InbreedingCoeff=-0.1515;MQ=45.93;MQ0=79;MQRankSum=0.187;QD=6.60;ReadPosRankSum=1.154;VQSLOD=-0.5784;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,1:12:9.03:115,9,0	1/1:5,2:5:9.03:130,9,0	0/0:23,0:10:5.15:0,5,304	0/0:30,0:18:47.85:0,48,580	./.	0/1:14,4:16:18.23:149,0,18	0/1:12,4:10:29.85:30,0,32	0/1:12,10:14:17.08:348,0,17	0/0:11,7:15:3.27:0,3,31	0/1:17,14:24:40.79:350,0,41	1/1:13,1:9:9.03:114,9,0	1/1:13,1:9:1.87:105,2,0	0/1:7,1:5:20.91:32,0,21	0/1:18,1:16:47.66:48,0,53	0/1:22,1:18:3.71:148,0,4	0/1:12,3:12:26.89:138,0,27	0/1:5,1:5:29.06:77,0,29	1/1:3,6:7:6.02:72,6,0	0/1:7,3:6:40.51:108,0,41	1/1:10,6:8:5.68:67,6,0	1/1:22,2:15:5.76:76,6,0	0/1:19,8:18:10.48:74,0,10	0/0:6,10:14:2.23:0,2,9	1/1:14,5:14:12.04:153,12,0	1/1:9,19:18:1.37:114,1,0	0/0:24,0:20:19.54:0,20,655	0/1:9,9:12:12.04:112,0,12	0/1:10,0:10:24.10:24,0,261
chr10	82500547	.	G	GA	6013.74	PASS	AB=0.636;AC=47;AF=0.839;AN=56;BaseQRankSum=-3.819;DP=326;FS=9.842;HRun=9;HaplotypeScore=59.6497;InbreedingCoeff=0.8060;MQ=82.28;MQ0=0;MQRankSum=-3.152;QD=23.86;ReadPosRankSum=2.043;VQSLOD=5.4720;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,8:14:0.40:260,0,0	1/1:1,3:4:9.02:99,9,0	0/0:19,0:18:15.52:0,16,203	0/0:20,0:16:6.86:0,7,183	1/1:2,10:13:6.84:272,7,0	1/1:2,7:9:20.54:208,21,0	1/1:2,8:10:24.05:258,24,0	1/1:2,10:12:30.07:323,30,0	1/1:3,11:13:27.07:298,27,0	1/1:2,10:12:33.06:352,33,0	1/1:2,4:7:14.87:147,15,0	1/1:0,5:5:15.04:164,15,0	1/1:2,3:5:11.98:118,12,0	1/1:2,4:6:12.03:133,12,0	1/1:1,5:5:15.04:165,15,0	1/1:1,3:4:9.02:99,9,0	1/1:3,15:17:48.04:504,48,0	1/1:5,8:9:21.06:232,21,0	1/1:2,11:14:35.89:355,36,0	1/1:3,18:21:54.07:563,54,0	1/1:1,5:6:12.03:133,12,0	1/1:2,7:9:21.06:232,21,0	1/1:0,7:7:21.06:231,21,0	1/1:2,11:12:21.06:232,21,0	1/1:7,14:21:15.46:389,15,0	0/0:23,1:24:29.78:0,30,478	1/1:1,8:9:24.05:248,24,0	0/0:10,0:10:20.93:0,21,176
chr10	82500583	.	A	AAG	33.28	PASS	AB=0.913;AC=4;AF=0.071;AN=56;BaseQRankSum=3.817;DP=258;FS=2.268;HRun=0;HaplotypeScore=67.6932;InbreedingCoeff=-0.0960;MQ=52.91;MQ0=11;MQRankSum=-2.662;QD=0.95;ReadPosRankSum=-1.546;VQSLOD=0.7185;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:20.99:0,21,286	0/0:1,0:1:3.01:0,3,44	0/0:18,0:10:24.96:0,25,337	0/0:32,0:18:44.98:0,45,633	0/0:7,0:7:21.07:0,21,306	0/0:8,0:7:18.06:0,18,265	0/0:9,0:5:15.04:0,15,192	0/0:8,0:8:24.08:0,24,339	0/1:8,1:8:31.98:32,0,245	0/1:8,0:8:0.70:1,0,244	0/0:4,0:4:12.04:0,12,177	0/0:5,0:4:12.04:0,12,178	0/0:5,0:5:9.03:0,9,133	0/0:7,0:5:12.04:0,12,178	0/0:8,0:7:18.06:0,18,263	0/0:4,0:4:11.85:0,12,121	0/0:9,0:8:15.05:0,15,204	0/0:10,0:5:8.98:0,9,101	0/0:5,0:5:8.47:0,8,159	0/0:10,0:9:27.09:0,27,399	0/0:3,0:3:3.01:0,3,41	0/0:11,0:9:12.04:0,12,177	0/1:6,3:9:86.21:86,0,201	0/0:9,0:7:17:0,17,178	0/1:9,0:8:10.61:11,0,263	0/0:18,0:18:54.18:0,54,794	0/0:10,0:10:27.07:0,27,414	0/0:15,0:15:38.46:0,38,514
chr10	82500598	.	AG	A	1898.37	PASS	AB=0.773;AC=37;AF=0.685;AN=54;BaseQRankSum=5.060;DP=235;FS=28.170;HRun=2;HaplotypeScore=52.6136;InbreedingCoeff=0.0914;MQ=47.24;MQ0=24;MQRankSum=-3.841;QD=11.04;ReadPosRankSum=-0.539;VQSLOD=0.0459;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,2:5:3:29,3,0	./.	0/1:23,0:9:1.43:1,0,212	0/0:32,1:17:41.68:0,42,536	1/1:0,4:4:12.04:150,12,0	1/1:4,3:6:9.03:114,9,0	1/1:5,1:1:3.01:33,3,0	0/1:4,1:5:53:53,0,65	1/1:2,4:5:1.40:105,1,0	0/1:4,3:6:64.59:65,0,74	1/1:1,4:4:12.04:152,12,0	1/1:2,3:3:9.03:114,9,0	1/1:4,3:7:9.03:114,9,0	1/1:2,5:5:11.99:128,12,0	0/1:5,2:6:32.73:89,0,33	0/1:4,2:6:64.70:65,0,78	1/1:3,1:3:3.01:38,3,0	0/1:7,1:2:11.29:31,0,11	1/1:0,2:2:6.01:60,6,0	1/1:6,4:8:7.90:103,8,0	0/0:3,0:2:5.23:0,5,52	1/1:8,1:7:6.01:63,6,0	0/1:4,4:8:22.50:133,0,22	0/1:5,4:6:35.91:45,0,36	1/1:3,5:7:6.80:198,7,0	0/0:11,0:11:22.66:0,23,357	0/1:6,7:11:22.44:182,0,22	0/0:16,0:16:30.45:0,30,527
chr10	82500605	.	AG	A	1383.12	PASS	AB=0.818;AC=34;AF=0.630;AN=54;BaseQRankSum=4.671;DP=238;FS=11.260;HRun=2;HaplotypeScore=55.7731;InbreedingCoeff=-0.2316;MQ=36.76;MQ0=28;MQRankSum=-4.146;QD=7.95;ReadPosRankSum=0.381;VQSLOD=-0.3333;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,2:5:3:29,3,0	./.	0/0:21,0:7:13.17:0,13,185	0/0:26,0:10:27.56:0,28,388	1/1:1,4:4:11.97:131,12,0	0/1:5,1:5:12.36:31,0,12	1/1:7,1:1:3.01:33,3,0	0/1:5,1:5:31.76:32,0,66	0/1:7,1:6:31.74:33,0,32	0/1:6,2:6:14.44:76,0,14	1/1:2,2:3:6.02:75,6,0	1/1:3,3:4:9.50:115,10,0	1/1:5,3:8:9.03:114,9,0	1/1:4,2:4:3.01:34,3,0	0/1:4,2:5:34.25:67,0,34	0/1:5,1:6:29.11:29,0,53	1/1:3,1:3:3.01:38,3,0	0/1:7,2:3:28.30:28,0,51	0/1:3,2:4:48.09:48,0,49	0/1:9,3:10:44.22:44,0,45	0/1:3,0:2:20.56:21,0,39	0/1:9,1:8:10.33:32,0,10	0/1:5,3:7:64.22:97,0,64	0/1:3,4:4:34.47:45,0,34	1/1:4,5:8:4.22:175,4,0	0/1:8,2:10:29.78:30,0,274	1/1:7,7:12:8.76:188,9,0	0/0:16,0:16:33.99:0,34,532
chr10	82500613	.	GGA	G	80.40	PASS	AB=0.910;AC=8;AF=0.154;AN=52;BaseQRankSum=-1.169;DP=245;FS=0.000;HRun=0;HaplotypeScore=68.7442;InbreedingCoeff=-0.0895;MQ=34.38;MQ0=41;MQRankSum=-0.644;QD=1.49;ReadPosRankSum=-1.718;VQSLOD=1.1070;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:4:2.96:0,3,19	./.	0/0:17,0:3:5.28:0,5,69	0/0:20,0:5:12.02:0,12,134	0/0:5,0:4:8.85:0,9,56	0/0:3,0:2:2.99:0,3,24	./.	0/0:5,0:4:0.65:0,1,39	0/1:9,1:8:3.43:3,0,89	0/1:10,0:7:31.43:31,0,70	1/1:5,0:2:1.63:5,2,0	0/0:6,0:4:8.49:0,8,56	0/0:8,0:8:5.88:0,6,37	0/1:5,1:4:13.80:38,0,14	0/0:6,0:5:8.83:0,9,54	0/1:5,0:5:20.66:26,0,21	0/0:7,0:5:8.82:0,9,60	0/1:10,1:5:24.46:54,0,24	0/1:5,1:5:24.64:39,0,25	0/0:12,0:10:18.99:0,19,128	0/0:3,0:2:4.25:0,4,34	0/0:13,0:9:8.16:0,8,49	0/0:10,0:8:17.25:0,17,114	0/0:9,0:5:7.15:0,7,43	0/0:11,0:10:19.87:0,20,126	0/0:11,0:9:27.05:0,27,316	0/0:13,1:12:21.93:0,22,161	0/0:17,0:15:38.63:0,39,441
chr10	82500657	.	AG	A	220.49	PASS	AB=0.851;AC=10;AF=0.217;AN=46;BaseQRankSum=3.456;DP=159;FS=2.422;HRun=1;HaplotypeScore=34.0660;InbreedingCoeff=-0.1225;MQ=24.00;MQ0=44;MQRankSum=-0.989;QD=3.87;ReadPosRankSum=-0.408;VQSLOD=0.1081;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:3.01:0,3,42	./.	./.	./.	./.	0/1:3,1:3:35.56:36,0,36	0/0:9,0:3:3.91:0,4,81	0/0:9,0:4:12.04:0,12,169	0/0:7,0:5:8.39:0,8,103	0/1:6,1:4:26.70:27,0,76	0/0:5,0:2:6.02:0,6,90	./.	0/0:7,0:7:3.01:0,3,47	0/0:5,0:3:3.01:0,3,43	0/0:5,0:4:3.48:0,3,43	0/0:4,0:4:6.02:0,6,86	0/0:5,0:3:3.01:0,3,48	0/0:9,0:3:8.06:0,8,89	0/0:3,0:1:3.01:0,3,43	0/1:6,3:8:18.11:158,0,18	0/0:2,0:1:3.01:0,3,48	0/1:13,1:8:35.43:35,0,36	0/1:5,1:4:30.01:30,0,84	1/1:6,0:2:0.47:1,0,0	1/1:2,1:2:2.97:20,3,0	0/0:13,0:9:27.09:0,27,400	0/1:7,1:6:31.98:32,0,77	0/0:11,0:8:15.03:0,15,194
chr10	82502657	.	TG	T	4555.96	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=5.691;DP=326;FS=129.751;HRun=3;HaplotypeScore=108.1661;InbreedingCoeff=0.8014;MQ=63.82;MQ0=7;MQRankSum=-5.555;QD=21.09;ReadPosRankSum=-0.084;VQSLOD=0.2179;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:16:44.90:393,45,0	1/1:2,2:4:12:112,12,0	0/0:46,0:22:11.64:0,12,335	0/0:27,0:13:29.20:0,29,348	1/1:3,9:12:17.56:197,18,0	1/1:3,4:6:17.06:161,17,0	1/1:2,7:9:23.96:206,24,0	1/1:6,2:8:17.96:151,18,0	1/1:2,11:13:36.05:373,36,0	1/1:9,8:17:45.42:438,45,0	1/1:7,6:13:19.43:205,19,0	1/1:2,4:6:14.69:153,15,0	1/1:2,6:8:20.70:220,21,0	1/1:4,5:9:23.77:216,24,0	1/1:5,4:9:20.74:201,21,0	1/1:2,4:6:12.03:131,12,0	1/1:3,5:8:20.86:177,21,0	1/1:1,3:4:9.02:98,9,0	1/1:4,3:5:11.98:107,12,0	1/1:7,6:13:27.02:248,27,0	1/1:0,3:3:2.94:18,3,0	1/1:6,4:9:15.32:164,15,0	1/1:2,4:6:9.55:116,10,0	1/1:2,2:4:4.20:47,4,0	1/1:8,3:11:2.98:188,3,0	0/0:22,0:22:43.22:0,43,761	1/1:2,9:12:29.92:237,30,0	0/0:15,0:15:38.11:0,38,576
chr10	82502670	.	TA	T	4068.78	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=7.799;DP=290;FS=73.407;HRun=3;HaplotypeScore=116.1050;InbreedingCoeff=0.7256;MQ=72.39;MQ0=2;MQRankSum=-8.383;QD=20.45;ReadPosRankSum=0.922;VQSLOD=-0.5448;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,15:19:32.74:247,33,0	1/1:3,0:3:9.01:93,9,0	0/0:34,0:22:39.36:0,39,435	0/0:20,0:14:31.09:0,31,331	1/1:12,1:13:23.96:234,24,0	1/1:6,0:6:12.04:139,12,0	1/1:2,10:12:29.88:253,30,0	1/1:4,4:8:20.91:174,21,0	1/1:13,1:14:36.94:394,37,0	1/1:14,0:14:30.90:313,31,0	1/1:13,0:13:21.03:221,21,0	1/1:4,0:4:12.04:138,12,0	1/1:8,0:8:21.03:228,21,0	1/1:6,0:6:15:158,15,0	1/1:6,0:6:15:159,15,0	1/1:7,0:7:18.87:182,19,0	1/1:8,0:8:10.44:123,10,0	1/1:3,0:3:9.03:104,9,0	1/1:4,2:6:4.58:77,5,0	1/1:1,6:7:17.90:139,18,0	1/1:3,0:3:2.97:20,3,0	1/1:10,0:10:17.91:164,18,0	1/1:6,0:6:9.91:108,10,0	1/1:5,0:5:5.96:53,6,0	0/1:6,0:6:7.95:89,0,8	0/0:20,0:20:32.16:0,32,568	1/1:2,10:12:32.88:258,33,0	0/0:16,0:16:37.15:0,37,508
chr10	82503250	.	A	AT	10771.38	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-7.047;DP=468;FS=25.790;HRun=8;HaplotypeScore=44.1528;InbreedingCoeff=0.9509;MQ=85.19;MQ0=0;MQRankSum=-6.114;QD=28.05;ReadPosRankSum=2.783;VQSLOD=3.2241;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:29:75.22:863,75,0	1/1:2,5:7:15.04:173,15,0	0/0:21,0:21:46.79:0,47,402	0/0:17,0:17:45.01:0,45,408	1/1:1,11:12:33.10:381,33,0	1/1:3,19:22:51.15:589,51,0	1/1:2,15:17:42.12:485,42,0	1/1:5,19:24:57.14:636,57,0	1/1:4,12:16:14.64:412,15,0	1/1:0,15:15:45.13:519,45,0	1/1:1,3:4:11.90:118,12,0	1/1:3,5:8:12.03:132,12,0	1/1:1,16:17:45.13:519,45,0	1/1:1,17:18:42.12:485,42,0	1/1:1,18:19:54.16:623,54,0	1/1:0,15:15:39.12:450,39,0	1/1:1,30:31:72.21:831,72,0	1/1:0,12:12:30.09:345,30,0	1/1:5,11:16:33.10:379,33,0	1/1:1,14:15:42.12:485,42,0	1/1:1,18:19:51.15:589,51,0	1/1:2,12:14:36.07:401,36,0	1/1:1,5:6:15.04:173,15,0	1/1:1,18:19:11.65:388,12,0	1/1:1,10:11:30.09:346,30,0	0/0:30,2:32:11.74:0,12,610	1/1:2,16:17:39.01:450,39,0	0/0:14,0:14:42.02:0,42,384
chr10	82504073	.	G	GGGGC	4118.89	PASS	AB=0.875;AC=38;AF=0.760;AN=50;BaseQRankSum=8.869;DP=160;FS=0.625;HRun=0;HaplotypeScore=49.3177;InbreedingCoeff=0.5537;MQ=145.11;MQ0=0;MQRankSum=-9.848;QD=63.37;ReadPosRankSum=3.849;VQSLOD=5.3603;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:9:27.09:669,27,0	1/1:0,1:1:3.01:82,3,0	0/0:29,0:29:87.29:0,87,1644	0/0:30,0:30:81.23:0,81,1524	./.	1/1:0,5:5:12.04:321,12,0	0/0:1,0:1:1.25:0,1,3	1/1:0,2:2:6.02:163,6,0	1/1:2,2:4:7:207,7,0	1/1:0,4:5:14.88:325,15,0	./.	1/1:0,6:6:18.06:486,18,0	1/1:0,3:3:9.03:233,9,0	1/1:1,4:5:15.05:382,15,0	./.	1/1:0,1:1:3.01:84,3,0	1/1:2,2:4:12.04:239,12,0	1/1:0,1:1:3.01:84,3,0	0/1:2,1:3:1.45:40,0,1	1/1:0,3:3:9.03:248,9,0	1/1:0,2:3:3.01:85,3,0	1/1:1,1:2:0.97:80,1,0	1/1:1,0:1:2.92:17,3,0	0/1:1,0:1:0:0,0,0	1/1:0,3:3:9.03:238,9,0	0/0:29,0:29:84.27:0,84,1584	1/1:2,1:3:5.99:136,6,0	0/0:5,0:5:15.05:0,15,283
chr10	82504816	.	GATT	G	83.53	PASS	AB=0.792;AC=6;AF=0.107;AN=56;BaseQRankSum=-6.312;DP=272;FS=4.211;HRun=0;HaplotypeScore=121.5027;InbreedingCoeff=-0.1326;MQ=65.92;MQ0=0;MQRankSum=-0.940;QD=1.55;ReadPosRankSum=-2.475;VQSLOD=1.7960;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,1:16:23.32:0,23,550	0/0:5,0:5:12.04:0,12,253	0/0:17,0:17:50.38:0,50,856	0/0:8,0:7:21.07:0,21,504	0/0:6,1:7:13.54:0,14,294	0/1:2,3:5:34.86:35,0,107	0/0:11,2:13:15.60:0,16,599	0/1:18,2:20:37.31:37,0,1006	0/0:8,1:9:10.04:0,10,425	0/1:9,2:11:51.66:52,0,468	0/0:5,0:5:12.04:0,12,229	0/0:5,0:5:15.05:0,15,266	0/0:13,1:14:33.27:0,33,717	0/0:4,1:5:6.44:0,6,229	0/0:3,0:3:9.03:0,9,179	0/0:9,0:9:24.08:0,24,487	0/0:11,0:11:24.01:0,24,439	0/0:5,0:5:9.03:0,9,191	0/0:14,1:13:39.05:0,39,819	0/0:11,2:13:10.11:0,10,470	0/0:10,0:10:27.09:0,27,505	0/0:10,2:12:17.21:0,17,463	0/0:7,0:7:18.05:0,18,261	0/0:14,0:14:18.42:0,18,258	0/1:3,1:4:3.01:3,0,163	0/0:14,1:15:17.24:0,17,856	0/1:7,3:10:51.38:51,0,375	0/1:3,1:4:23.60:24,0,181
chr10	82504824	.	G	GA	554.72	PASS	AB=0.881;AC=17;AF=0.304;AN=56;BaseQRankSum=-2.317;DP=240;FS=5.423;HRun=0;HaplotypeScore=111.8346;InbreedingCoeff=-0.2119;MQ=60.92;MQ0=0;MQRankSum=-0.946;QD=3.51;ReadPosRankSum=-6.640;VQSLOD=0.5544;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,1:9:3.90:0,4,17	0/0:4,0:4:8.15:0,8,23	0/1:12,0:12:25.05:64,0,25	0/1:7,0:6:2.77:63,0,3	0/1:7,1:8:12.09:14,0,12	0/1:3,3:6:6.71:7,0,9	0/1:9,2:11:22.24:38,0,22	0/1:16,2:18:33.59:180,0,34	0/0:5,1:6:5.89:0,6,23	0/1:8,2:10:11.92:122,0,12	1/1:5,0:5:0.42:62,0,0	0/0:4,0:4:8.33:0,8,25	0/0:11,1:12:19.72:0,20,59	0/0:5,1:6:8.56:0,9,28	0/0:3,0:3:6.11:0,6,17	0/1:9,0:9:2.19:2,0,26	0/0:10,0:10:12.68:0,13,39	0/0:4,0:4:8.15:0,8,23	0/0:9,1:9:18.33:0,18,52	0/1:10,2:12:5.07:5,0,38	0/0:9,0:9:12.22:0,12,35	0/1:9,2:11:20.64:31,0,21	0/0:5,0:5:4.07:0,4,12	0/1:12,0:12:8.38:25,0,8	0/1:4,1:5:0.32:0,0,5	0/1:16,1:17:16.90:17,0,46	0/1:7,3:10:15.36:37,0,15	0/1:4,1:5:8.31:31,0,8
chr10	82505065	.	ATGATTGGC	A	3120.55	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=3.082;DP=409;FS=40.888;HRun=0;HaplotypeScore=106.8748;InbreedingCoeff=0.9177;MQ=45.05;MQ0=20;MQRankSum=-8.005;QD=40.01;ReadPosRankSum=0.485;VQSLOD=1.1820;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,17:23:30.10:829,30,0	0/0:6,0:6:12.04:0,12,536	0/0:25,0:6:15.05:0,15,651	0/0:22,0:5:15.05:0,15,648	0/0:13,0:13:30.10:0,30,1179	0/0:10,0:10:27.09:0,27,1199	1/1:0,3:3:6.02:172,6,0	1/1:10,10:9:3.01:55,3,0	0/0:16,0:16:42.14:0,42,1835	0/0:19,0:19:57.20:0,57,2523	0/0:11,0:10:24.08:0,24,909	0/0:19,0:19:51.12:0,51,2274	0/0:14,0:14:39.13:0,39,1740	0/0:14,0:14:39.13:0,39,1741	0/0:21,0:21:54.19:0,54,2347	0/0:15,0:15:33.11:0,33,1468	0/0:24,0:23:60.21:0,60,2674	0/0:8,0:8:18.06:0,18,804	1/1:3,4:6:12.04:344,12,0	1/1:1,14:15:42.14:1205,42,0	0/0:20,0:20:54.19:0,54,2355	0/0:12,0:12:33.11:0,33,1393	0/0:7,0:7:21.07:0,21,770	0/0:23,0:23:60.21:0,60,2680	0/0:9,0:9:27.09:0,27,1197	0/0:13,0:10:30.10:0,30,1340	1/1:1,8:8:24.08:689,24,0	0/0:8,0:8:24.08:0,24,1068
chr10	82505130	.	TA	T	20192.16	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=4.477;DP=620;FS=8.596;HRun=1;HaplotypeScore=74.2982;InbreedingCoeff=0.9787;MQ=52.67;MQ0=6;MQRankSum=4.005;QD=37.05;ReadPosRankSum=1.357;VQSLOD=5.0432;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,41:41:99:1483,114,0	1/1:0,3:3:9.03:126,9,0	0/0:15,0:6:15.05:0,15,223	0/0:22,0:12:33.11:0,33,519	1/1:0,11:11:30.03:377,30,0	1/1:0,16:16:42.14:587,42,0	1/1:0,11:11:29.97:353,30,0	1/1:0,15:15:42.11:538,42,0	1/1:0,19:19:51.17:713,51,0	1/1:0,22:22:62.88:879,63,0	1/1:0,10:10:27.01:335,27,0	1/1:0,24:24:63.14:859,63,0	1/1:0,21:21:60.20:839,60,0	1/1:0,28:28:75.14:985,75,0	1/1:0,25:25:72.17:965,72,0	1/1:0,20:20:48.16:671,48,0	1/1:0,54:54:99:1930,138,0	1/1:0,19:19:48.16:671,48,0	1/1:4,22:20:57.18:774,57,0	1/1:0,14:14:42.14:587,42,0	1/1:0,58:58:99:2350,169,0	1/1:0,18:18:51.14:691,51,0	1/1:0,16:16:45.15:629,45,0	1/1:0,42:42:99:1594,114,0	1/1:0,11:11:33.11:461,33,0	0/0:24,1:25:33.34:0,33,1084	1/1:1,19:19:57.19:794,57,0	0/0:13,0:13:39.13:0,39,623
chr10	82507083	.	TA	T	2909.74	PASS	AC=46;AF=0.852;AN=54;BaseQRankSum=12.047;DP=252;FS=46.155;HRun=1;HaplotypeScore=145.3910;InbreedingCoeff=0.8726;MQ=112.36;MQ0=0;MQRankSum=-11.591;QD=16.82;ReadPosRankSum=5.082;VQSLOD=0.9396;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,1:15:31.36:233,31,0	1/1:5,0:5:14.92:111,15,0	0/0:24,0:24:69.24:0,69,1102	0/0:21,0:21:54.10:0,54,764	1/1:6,0:6:14.87:104,15,0	1/1:9,0:9:23.86:172,24,0	1/1:5,1:6:14.93:110,15,0	1/1:8,0:8:5.98:47,6,0	1/1:9,4:13:35.89:304,36,0	1/1:4,0:4:8.96:69,9,0	./.	1/1:8,0:8:23.86:175,24,0	1/1:5,0:5:14.91:108,15,0	1/1:6,0:6:9.83:96,10,0	1/1:6,0:6:17.88:128,18,0	1/1:5,0:5:14.92:111,15,0	1/1:8,0:8:16.48:114,16,0	1/1:7,0:6:17.97:151,18,0	1/1:5,0:5:11.97:96,12,0	1/1:10,0:10:29.81:216,30,0	1/1:9,0:9:15.82:115,16,0	1/1:7,0:7:17.83:124,18,0	1/1:5,0:5:11.89:84,12,0	1/1:6,0:6:8.92:65,9,0	1/1:8,0:8:20.86:149,21,0	0/0:28,0:28:59.75:0,60,1248	1/1:12,0:12:26.81:194,27,0	0/0:5,0:5:15.05:0,15,240
chr10	82507085	.	GGGC	G	5034.93	PASS	AC=46;AF=0.852;AN=54;BaseQRankSum=12.186;DP=237;FS=37.763;HRun=0;HaplotypeScore=144.1096;InbreedingCoeff=0.9090;MQ=116.27;MQ0=0;MQRankSum=-12.029;QD=32.07;ReadPosRankSum=4.870;VQSLOD=3.0296;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,10:14:33.03:369,33,0	1/1:0,5:5:15.04:173,15,0	0/0:23,0:23:69.24:0,69,1655	0/0:23,0:23:66.22:0,66,1519	1/1:0,5:5:15.04:175,15,0	1/1:0,8:8:24.07:284,24,0	1/1:1,4:5:15.02:165,15,0	1/1:3,2:5:15.02:154,15,0	1/1:4,8:12:35.74:356,36,0	1/1:0,4:4:9.03:112,9,0	./.	1/1:0,8:8:24.07:286,24,0	1/1:0,5:5:15.04:176,15,0	1/1:1,5:6:18.01:196,18,0	1/1:0,6:6:18.05:212,18,0	1/1:0,5:5:15.05:179,15,0	1/1:0,7:7:17.97:196,18,0	1/1:1,6:6:17.89:205,18,0	1/1:0,4:4:12.04:152,12,0	1/1:0,10:10:30.09:353,30,0	1/1:0,6:6:17.79:190,18,0	1/1:0,6:6:18.05:210,18,0	1/1:1,4:5:15.03:166,15,0	1/1:1,5:6:8.15:104,8,0	1/1:0,7:7:21.06:247,21,0	0/0:27,1:28:47.05:0,47,1959	1/1:2,9:11:33.07:372,33,0	0/0:5,0:5:15.05:0,15,370
chr10	82507089	.	TTTA	T	2606.33	PASS	AC=46;AF=0.852;AN=54;BaseQRankSum=12.569;DP=231;FS=47.028;HRun=0;HaplotypeScore=148.6986;InbreedingCoeff=0.7992;MQ=123.10;MQ0=0;MQRankSum=-12.455;QD=17.97;ReadPosRankSum=7.055;VQSLOD=1.3724;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:11:28.30:192,28,0	1/1:0,5:5:14.88:106,15,0	0/0:26,0:26:75.26:0,75,1798	0/0:25,0:25:72.25:0,72,1683	1/1:0,5:5:14.88:106,15,0	1/1:0,8:8:23.81:170,24,0	1/1:1,4:5:11.90:85,12,0	1/1:0,2:2:5.97:44,6,0	1/1:4,8:12:4.27:145,4,0	1/1:0,4:4:8.95:66,9,0	./.	1/1:0,8:8:23.83:171,24,0	1/1:0,5:5:14.88:106,15,0	1/1:0,5:5:14.88:105,15,0	1/1:0,6:6:17.86:127,18,0	1/1:0,5:5:14.89:107,15,0	1/1:0,7:7:16.13:110,16,0	1/1:0,6:6:1.72:96,2,0	1/1:0,4:4:11.95:90,12,0	1/1:0,10:10:29.77:213,30,0	1/1:0,6:6:16.43:110,16,0	1/1:0,6:6:17.86:127,18,0	1/1:0,4:4:11.91:85,12,0	1/1:0,5:5:8.05:63,8,0	1/1:0,7:7:20.83:149,21,0	0/0:27,1:28:62.26:0,62,1934	1/1:0,9:9:26.80:192,27,0	0/0:6,0:6:18.06:0,18,444
chr10	82507093	.	CAATAGAG	C	8739.53	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=12.452;DP=224;FS=52.513;HRun=0;HaplotypeScore=142.1566;InbreedingCoeff=0.8282;MQ=125.70;MQ0=0;MQRankSum=-12.452;QD=62.43;ReadPosRankSum=7.108;VQSLOD=2.6166;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:30.10:632,30,0	1/1:0,5:5:15.05:331,15,0	0/0:30,0:30:90.31:0,90,3083	0/0:22,0:22:66.23:0,66,2656	1/1:0,5:5:15.05:326,15,0	1/1:0,8:8:24.08:525,24,0	1/1:0,4:4:12.04:262,12,0	1/1:0,2:2:6.02:134,6,0	1/1:0,8:8:24.08:525,24,0	1/1:0,4:4:9.03:199,9,0	1/1:0,1:1:2.98:21,3,0	1/1:0,8:8:24.08:523,24,0	1/1:0,5:5:15.05:326,15,0	1/1:0,5:5:15.05:326,15,0	1/1:0,6:6:18.06:393,18,0	1/1:0,5:5:15.05:330,15,0	1/1:0,7:7:18.06:375,18,0	1/1:0,6:6:15.05:335,15,0	1/1:0,4:4:12.04:270,12,0	1/1:0,10:10:30.10:654,30,0	1/1:0,6:6:18.06:368,18,0	1/1:0,6:6:18.06:391,18,0	1/1:0,4:4:12.04:257,12,0	1/1:0,5:5:8.06:191,8,0	1/1:0,7:7:21.07:453,21,0	0/0:25,1:26:10.86:0,11,2886	1/1:0,9:9:27.09:592,27,0	0/0:6,0:6:18.06:0,18,733
chr10	82507152	.	T	TAAG	25840.06	PASS	AB=0.885;AC=49;AF=0.875;AN=56;BaseQRankSum=-2.050;DP=518;FS=19.748;HRun=0;HaplotypeScore=132.2092;InbreedingCoeff=0.8135;MQ=91.00;MQ0=0;MQRankSum=-11.095;QD=56.05;ReadPosRankSum=3.150;VQSLOD=5.0410;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:32:78.27:1733,78,0	1/1:0,6:7:15.05:344,15,0	0/0:17,0:17:48.14:0,48,731	0/0:35,0:35:48.52:0,49,1369	1/1:0,6:7:12.04:276,12,0	1/1:1,24:26:72.25:1655,72,0	1/1:0,16:16:45.15:1034,45,0	1/1:5,35:40:99:2488,114,0	1/1:4,25:29:69.24:1587,69,0	1/1:1,15:16:48.16:1069,48,0	1/1:1,9:10:27.09:588,27,0	1/1:1,19:22:54.19:1224,54,0	1/1:1,12:13:39.13:884,39,0	1/1:2,16:20:51.18:1146,51,0	1/1:1,29:29:75.26:1710,75,0	1/1:0,15:15:39.13:896,39,0	1/1:1,13:16:42.14:966,42,0	1/1:0,9:9:27.09:622,27,0	1/1:6,20:28:72.23:1514,72,0	1/1:4,18:22:48.16:1099,48,0	1/1:0,14:14:39.13:880,39,0	1/1:0,11:11:33.11:736,33,0	1/1:2,3:5:15.05:312,15,0	1/1:0,12:13:33.11:757,33,0	1/1:0,16:16:42.14:966,42,0	0/1:20,3:23:99:123,0,875	1/1:2,18:20:54.19:1229,54,0	0/0:5,0:5:15.05:0,15,256
chr10	82508263	.	CT	C	11601.29	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=5.388;DP=583;FS=3.874;HRun=8;HaplotypeScore=77.5967;InbreedingCoeff=0.9981;MQ=64.70;MQ0=4;MQRankSum=3.169;QD=23.30;ReadPosRankSum=3.264;VQSLOD=5.6730;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,23:29:62.62:632,63,0	1/1:1,11:12:26.99:251,27,0	0/0:24,0:17:32.39:0,32,350	0/0:17,0:12:27.06:0,27,300	1/1:1,29:30:84.13:810,84,0	1/1:2,18:20:51.08:493,51,0	1/1:2,14:15:33.05:319,33,0	1/1:5,20:25:36.19:495,36,0	1/1:2,13:15:30.04:290,30,0	1/1:1,33:34:96.14:921,96,0	1/1:3,20:23:54.08:521,54,0	1/1:4,21:25:60.09:579,60,0	1/1:3,18:21:48.07:464,48,0	1/1:6,11:17:27.04:261,27,0	1/1:1,20:21:60.08:573,60,0	1/1:1,13:14:36.06:348,36,0	1/1:1,20:21:60.09:579,60,0	1/1:2,21:23:51.06:486,51,0	1/1:3,10:13:33.03:313,33,0	1/1:4,16:20:48.07:462,48,0	1/1:0,15:15:42.07:406,42,0	1/1:4,9:13:26.99:251,27,0	1/1:1,11:13:32.08:296,32,0	1/1:1,12:13:30.05:290,30,0	1/1:0,30:30:87.14:840,87,0	0/0:29,0:29:76.46:0,76,887	1/1:4,31:35:75.12:724,75,0	0/0:15,0:15:39.11:0,39,460
chr10	82508802	.	AGGTG	A	10972.46	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=-7.546;DP=691;FS=20.062;HRun=0;HaplotypeScore=131.5919;InbreedingCoeff=0.4634;MQ=74.13;MQ0=7;MQRankSum=0.325;QD=18.38;ReadPosRankSum=2.961;VQSLOD=3.3473;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:99:220,0,231	1/1:0,5:5:2.93:54,3,0	0/0:28,0:23:48.01:0,48,504	0/0:24,0:17:40.57:0,41,407	1/1:6,18:24:38.79:513,39,0	1/1:1,15:16:21.07:370,21,0	0/1:33,0:33:99:352,0,154	1/1:33,0:33:27.16:632,27,0	1/1:3,25:28:35.89:634,36,0	1/1:3,21:25:63.05:800,63,0	1/1:3,21:24:45.09:753,45,0	1/1:6,17:23:26.55:415,27,0	1/1:2,23:25:25.91:458,26,0	1/1:3,21:24:33.11:582,33,0	1/1:0,30:30:44.94:793,45,0	1/1:4,24:28:35.65:635,36,0	1/1:10,25:35:39.13:688,39,0	1/1:3,8:11:9.03:159,9,0	0/1:15,0:13:99:128,0,104	0/1:24,0:24:66.01:66,0,462	1/1:7,49:55:48.16:847,48,0	1/1:1,17:18:15.52:265,16,0	1/1:10,5:15:32.98:397,33,0	1/1:2,25:27:36.12:620,36,0	1/1:4,12:16:24.08:422,24,0	0/0:25,0:25:35.91:0,36,837	0/1:31,0:31:99:172,0,771	0/0:17,0:17:42.04:0,42,686
chr10	82508812	.	G	GTGGA	1947.13	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=-7.272;DP=664;FS=12.340;HRun=0;HaplotypeScore=166.8457;InbreedingCoeff=0.7195;MQ=69.12;MQ0=10;MQRankSum=-1.187;QD=10.47;ReadPosRankSum=-4.718;VQSLOD=0.6673;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:32:30.92:291,31,0	0/0:6,0:6:5.98:0,6,53	0/0:24,0:18:6.01:0,6,67	0/0:29,0:22:17.88:0,18,140	0/0:21,0:21:29.89:0,30,291	0/0:19,0:19:27.05:0,27,272	1/1:24,0:29:20.93:317,21,0	1/1:34,0:33:15.40:118,15,0	0/0:26,0:26:36.09:0,36,381	0/0:22,0:22:36.50:0,37,348	0/0:22,0:22:45.10:0,45,467	0/0:21,0:21:30.87:0,31,297	0/0:25,0:25:21.87:0,22,290	0/0:21,0:21:33.08:0,33,348	0/0:35,0:35:60.08:0,60,597	0/0:26,0:26:41.81:0,42,430	0/0:26,0:26:39.10:0,39,412	0/0:12,0:12:12.01:0,12,117	0/0:15,0:12:5.48:0,5,48	0/1:20,0:20:15.97:16,0,206	0/0:54,0:53:54.12:0,54,558	0/0:19,0:19:21.03:0,21,209	0/0:12,0:12:18.02:0,18,177	0/0:29,0:28:40.42:0,40,416	0/0:14,0:14:27.06:0,27,279	1/1:14,9:23:39.11:786,39,0	0/1:34,0:34:31.39:31,0,429	1/1:6,8:14:24.08:567,24,0
chr10	82510696	.	G	GA	7770.24	PASS	AB=0.600;AC=46;AF=0.821;AN=56;BaseQRankSum=-7.709;DP=525;FS=2.659;HRun=12;HaplotypeScore=68.8989;InbreedingCoeff=0.6657;MQ=67.09;MQ0=1;MQRankSum=-2.193;QD=16.53;ReadPosRankSum=1.302;VQSLOD=6.0979;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,33:40:57.10:574,57,0	1/1:2,5:7:9.01:88,9,0	0/0:13,0:7:2.08:0,2,45	0/0:8,0:7:17.33:0,17,118	1/1:5,22:28:65.82:598,66,0	1/1:1,13:14:36.06:350,36,0	1/1:1,17:18:48.08:467,48,0	1/1:8,20:29:42.08:512,42,0	0/1:5,8:13:13.90:190,0,14	1/1:6,14:20:26.18:406,26,0	1/1:6,10:17:29.83:265,30,0	1/1:4,11:15:24.04:232,24,0	1/1:5,9:15:5.78:190,6,0	1/1:2,12:14:20.98:195,21,0	1/1:5,10:15:23.87:218,24,0	1/1:1,18:20:38.22:402,38,0	0/1:9,23:32:11.86:536,0,12	1/1:7,15:22:32.12:343,32,0	1/1:8,11:21:36.93:303,37,0	1/1:8,16:24:21.89:341,22,0	1/1:0,6:6:15.02:146,15,0	1/1:3,9:12:23.99:224,24,0	1/1:4,11:17:20.87:189,21,0	1/1:7,22:30:35.11:491,35,0	1/1:5,14:19:33:311,33,0	0/0:3,1:22:30.40:0,30,106	1/1:4,17:21:17.99:200,18,0	0/0:1,0:12:18.33:0,18,53
chr10	82512564	.	AAGCTTGCCAC	A	29402.06	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=16.593;DP=623;FS=1.012;HRun=0;HaplotypeScore=216.6086;InbreedingCoeff=0.9732;MQ=76.27;MQ0=0;MQRankSum=-18.435;QD=75.78;ReadPosRankSum=2.901;VQSLOD=4.5285;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,5129	1/1:0,8:8:21.03:613,21,0	0/0:20,0:20:57.20:0,57,2545	0/0:19,0:19:54.15:0,54,2497	1/1:4,30:34:84.12:2451,84,0	1/1:1,19:20:48.16:1581,48,0	0/0:20,0:20:60.21:0,60,2789	0/0:29,0:29:72.25:0,72,3525	1/1:3,18:21:48.16:1581,48,0	1/1:2,28:30:81.23:2518,81,0	1/1:2,28:30:75.13:2175,75,0	1/1:0,14:14:36.12:1186,36,0	1/1:1,27:28:72.25:2371,72,0	1/1:2,24:26:69.20:2194,69,0	1/1:2,30:32:87.30:2866,87,0	1/1:7,21:28:57.20:1878,57,0	1/1:3,17:20:36.04:1028,36,0	1/1:2,2:4:3.01:99,3,0	0/0:21,0:21:57.20:0,57,2705	0/0:27,0:27:81.28:0,81,3901	1/1:1,9:10:24.04:688,24,0	1/1:0,18:18:45.15:1482,45,0	1/1:4,20:24:54.19:1736,54,0	1/1:2,16:18:29.60:882,30,0	1/1:1,22:23:63.22:2075,63,0	0/0:23,0:23:69.24:0,69,3439	0/0:26,0:25:69.24:0,69,3625	0/0:16,0:16:45.15:0,45,2382
chr10	82513302	.	G	GAA	3438.82	PASS	AB=0.987;AC=47;AF=0.839;AN=56;BaseQRankSum=4.661;DP=433;FS=0.000;HRun=13;HaplotypeScore=142.0656;InbreedingCoeff=0.0507;MQ=46.73;MQ0=21;MQRankSum=-3.984;QD=8.21;ReadPosRankSum=-3.701;VQSLOD=0.4917;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,1:18:32.32:250,32,0	1/1:7,0:4:3:27,3,0	0/1:11,0:5:6.13:6,0,6	0/0:13,0:9:14.20:0,14,92	1/1:21,0:20:24.14:208,24,0	1/1:18,0:14:19.27:179,19,0	1/1:16,0:15:17.15:94,17,0	0/1:24,0:19:26.61:120,0,27	1/1:11,0:9:11.99:113,12,0	1/1:17,0:17:5.90:87,6,0	0/1:23,0:21:3.58:123,0,4	1/1:10,0:10:9.01:86,9,0	1/1:5,0:4:6.01:58,6,0	1/1:15,0:13:0.84:106,1,0	1/1:14,0:13:5.74:68,6,0	1/1:9,0:7:10.26:92,10,0	0/1:19,0:16:1.88:176,0,2	1/1:16,0:13:16.23:138,16,0	1/1:14,1:14:23.44:201,23,0	1/1:25,2:28:26.21:341,26,0	0/1:10,0:10:25.52:26,0,33	1/1:14,0:14:0.57:72,1,0	1/1:15,0:14:20.99:199,21,0	1/1:7,0:7:2.96:19,3,0	1/1:24,0:23:32.48:363,32,0	0/1:18,0:19:40.97:47,0,41	1/1:14,1:14:26.45:235,26,0	0/1:11,0:11:7.21:7,0,32
chr10	82513309	.	A	AAAAAAG	6320.92	PASS	AB=0.944;AC=26;AF=0.464;AN=56;BaseQRankSum=6.829;DP=429;FS=48.837;HRun=0;HaplotypeScore=166.3041;InbreedingCoeff=-0.4691;MQ=47.17;MQ0=14;MQRankSum=-3.513;QD=17.37;ReadPosRankSum=1.968;VQSLOD=2.5154;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,10:26:99:388,0,116	1/1:9,0:6:3:36,3,0	0/0:12,0:6:12.45:0,12,119	0/0:13,0:10:10.61:0,11,230	0/1:17,0:16:39.83:359,0,40	0/1:17,0:13:25.72:301,0,26	0/1:16,0:15:70.65:211,0,71	0/1:18,9:25:99:498,0,159	0/1:11,0:9:21.10:102,0,21	0/1:17,0:17:88.66:223,0,89	0/1:20,0:17:99:249,0,118	0/1:8,0:8:40.12:124,0,40	1/1:3,0:2:6.02:112,6,0	0/1:14,0:12:61.03:217,0,61	0/1:13,0:12:64.49:64,0,109	0/1:9,0:7:71.33:95,0,71	0/1:18,0:15:21.10:421,0,21	0/1:18,0:15:0.80:349,0,1	0/1:13,0:22:41.84:502,0,42	0/1:26,0:26:99:754,0,152	0/1:6,0:6:57.22:57,0,86	0/1:10,0:10:40.52:41,0,81	1/1:12,0:11:23.52:434,24,0	0/0:2,0:2:0.47:0,0,1	0/1:20,0:18:59.88:551,0,60	0/0:26,0:26:41.50:0,41,514	0/1:13,0:20:67.05:233,0,67	0/0:11,0:11:20.61:0,21,354
chr10	82513314	.	AAG	A	2794.35	PASS	AB=0.964;AC=29;AF=0.518;AN=56;BaseQRankSum=-9.195;DP=442;FS=32.140;HRun=0;HaplotypeScore=76.7629;InbreedingCoeff=-0.5620;MQ=47.99;MQ0=10;MQRankSum=3.975;QD=6.77;ReadPosRankSum=-8.381;VQSLOD=-0.6347;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:24,3:27:18.28:145,0,18	1/1:9,0:6:4.55:31,5,0	0/0:13,0:6:10.40:0,10,77	0/0:13,0:10:0.33:0,0,103	0/1:16,0:15:35.13:99,0,35	0/1:18,0:14:21.64:22,0,87	0/1:14,1:15:16.16:166,0,16	1/1:31,3:31:1.61:400,2,0	0/1:8,0:6:10.92:71,0,11	0/1:17,0:17:19.06:140,0,19	0/1:23,0:20:38.06:106,0,38	1/1:8,1:9:4.31:106,4,0	0/0:3,0:2:2.22:0,2,10	0/1:13,1:12:35.95:60,0,36	0/1:15,0:14:44.11:63,0,44	0/1:9,0:7:3.11:72,0,3	0/1:20,0:17:30.31:147,0,30	0/1:18,0:15:38.72:95,0,39	0/1:21,2:23:2.38:290,0,2	0/1:19,6:25:94.92:108,0,95	0/1:5,0:5:6.40:6,0,67	0/1:11,0:11:55.16:59,0,55	0/1:14,0:13:66.92:70,0,67	1/1:3,0:3:2.96:19,3,0	0/1:21,1:20:74.30:74,0,115	0/1:24,2:26:6.58:352,0,7	0/1:20,1:20:9.91:141,0,10	0/1:10,1:11:8.73:99,0,9
chr10	82513315	.	AG	A	4247.76	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.269;DP=443;FS=8.845;HRun=1;HaplotypeScore=68.2964;InbreedingCoeff=0.4839;MQ=48.23;MQ0=10;MQRankSum=0.392;QD=10.19;ReadPosRankSum=0.581;VQSLOD=1.9456;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:33.54:192,34,0	1/1:7,2:6:5.94:45,6,0	0/0:13,0:6:15.10:0,15,101	0/0:13,0:10:11.10:0,11,108	1/1:15,1:15:24.71:177,25,0	1/1:17,0:13:2.41:78,2,0	1/1:15,0:15:17.75:187,18,0	1/1:32,1:30:30.84:436,31,0	1/1:8,0:6:13.68:94,14,0	1/1:17,0:17:19.12:192,19,0	1/1:23,0:20:26.58:188,27,0	1/1:9,0:9:19.08:137,19,0	1/1:3,0:2:4.21:23,4,0	1/1:14,0:12:12.50:83,12,0	1/1:15,0:14:16.13:128,16,0	1/1:8,1:7:17.05:121,17,0	1/1:20,0:17:3.59:174,4,0	1/1:19,0:16:12.72:144,13,0	1/1:24,0:24:29.99:372,30,0	1/1:25,0:25:11.19:184,11,0	0/1:5,0:5:11.83:12,0,31	1/1:10,1:11:3.85:130,4,0	1/1:13,1:13:11.77:116,12,0	1/1:4,0:4:5.92:39,6,0	1/1:21,1:20:7.26:175,7,0	1/1:26,1:27:57.34:490,57,0	1/1:20,0:19:24.69:146,25,0	1/1:10,1:11:24.16:183,24,0
chr10	82513316	.	G	GAAAAAAA	4854.73	PASS	AB=0.986;AC=41;AF=0.732;AN=56;BaseQRankSum=-6.005;DP=448;FS=23.256;HRun=13;HaplotypeScore=120.9141;InbreedingCoeff=0.0274;MQ=48.27;MQ0=10;MQRankSum=-1.090;QD=11.53;ReadPosRankSum=-2.061;VQSLOD=-0.1311;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,1:28:29.96:596,30,0	1/1:9,0:6:5.59:88,6,0	0/0:13,0:6:17.44:0,17,216	0/0:14,0:11:17.33:0,17,224	1/1:16,0:15:3.36:28,3,0	0/1:18,0:14:7.54:37,0,8	0/1:15,0:15:5.82:284,0,6	1/1:33,0:30:47.78:1039,48,0	1/1:8,0:6:5.03:33,5,0	0/1:17,0:17:1.75:57,0,2	1/1:23,0:20:9.01:95,9,0	1/1:9,0:9:9.81:99,10,0	0/1:3,0:2:0:0,0,0	0/1:14,0:12:13.50:13,0,18	1/1:15,0:14:8.36:61,8,0	1/1:9,0:7:0.65:33,1,0	1/1:20,0:17:10.80:152,11,0	1/1:20,0:17:12.67:117,13,0	1/1:23,1:24:58.92:794,59,0	0/1:22,3:25:26.08:639,0,26	0/1:5,0:5:10.29:10,0,94	0/1:11,0:11:12.36:22,0,12	1/1:14,0:13:11.50:85,11,0	1/1:4,0:4:2.97:20,3,0	0/1:21,0:20:2.66:165,0,3	0/1:28,0:28:99:107,0,126	1/1:19,1:19:24.44:264,24,0	0/1:11,0:11:15.99:16,0,207
chr10	82517160	.	TA	T	10026	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=4.876;DP=514;FS=16.072;HRun=10;HaplotypeScore=54.7212;InbreedingCoeff=0.6657;MQ=68.68;MQ0=0;MQRankSum=-1.396;QD=21.52;ReadPosRankSum=3.780;VQSLOD=4.1464;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,21:27:62.97:547,63,0	1/1:1,9:10:26.99:234,27,0	0/0:12,1:12:0.74:0,1,223	0/1:11,0:9:15.93:16,0,80	1/1:3,21:24:59.97:521,60,0	1/1:2,15:17:38.99:339,39,0	1/1:2,12:14:35.99:313,36,0	1/1:6,15:21:44.98:391,45,0	1/1:3,14:17:41.99:364,42,0	1/1:2,24:26:68.97:599,69,0	1/1:2,16:18:41.98:365,42,0	1/1:2,21:23:62.97:547,63,0	1/1:1,8:9:23.99:208,24,0	1/1:2,13:15:38.98:339,39,0	1/1:2,12:14:11.43:262,11,0	1/1:1,22:23:44.51:549,45,0	1/1:1,27:28:77.98:677,78,0	1/1:1,19:20:50.99:443,51,0	1/1:2,10:12:29.99:260,30,0	1/1:0,16:16:44.99:391,45,0	1/1:0,10:10:29.99:260,30,0	1/1:2,17:19:47.99:417,48,0	1/1:3,18:22:53.02:449,53,0	1/1:2,10:12:26.99:234,27,0	1/1:2,22:24:62.98:547,63,0	0/0:23,3:27:2.88:0,3,699	1/1:4,30:34:86.98:755,87,0	0/0:8,0:8:17.98:0,18,167
chr10	82518580	.	A	ATG	11642.82	PASS	AB=0.712;AC=45;AF=0.804;AN=56;BaseQRankSum=1.589;DP=672;FS=2.332;HRun=0;HaplotypeScore=222.1444;InbreedingCoeff=0.3910;MQ=60.06;MQ0=9;MQRankSum=-5.213;QD=18.78;ReadPosRankSum=1.317;VQSLOD=4.8400;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,2:28:9.92:38,0,10	1/1:2,8:10:30.10:469,30,0	0/0:28,0:25:7.44:0,7,298	0/0:13,0:9:18.05:0,18,205	1/1:3,19:22:39.13:622,39,0	1/1:10,26:35:66.23:1065,66,0	0/1:12,0:23:10.83:11,0,14	1/1:14,1:39:67.91:562,68,0	1/1:2,18:20:39.13:619,39,0	1/1:15,21:36:66.19:1058,66,0	1/1:3,10:13:18.05:265,18,0	1/1:8,16:24:39.13:605,39,0	1/1:10,11:21:33.11:518,33,0	1/1:10,20:30:20.26:827,20,0	1/1:12,19:31:45.15:727,45,0	1/1:7,24:31:26.34:936,26,0	1/1:14,15:27:30.10:472,30,0	1/1:11,12:22:30.05:459,30,0	1/1:11,0:24:36.05:303,36,0	0/1:12,3:24:22.95:133,0,23	1/1:9,10:19:6.02:97,6,0	1/1:4,19:23:2.19:541,2,0	1/1:4,17:21:27.09:430,27,0	1/1:7,7:14:13.29:196,13,0	1/1:6,16:22:5.21:594,5,0	0/1:23,3:26:76.85:77,0,616	0/1:13,0:29:3.03:18,0,3	0/0:11,0:11:33.09:0,33,394
chr10	82518611	.	CG	C	2633.44	PASS	AB=0.651;AC=35;AF=0.625;AN=56;BaseQRankSum=9.832;DP=482;FS=0.937;HRun=1;HaplotypeScore=232.1877;InbreedingCoeff=-0.1767;MQ=46.80;MQ0=4;MQRankSum=-8.803;QD=6.11;ReadPosRankSum=6.847;VQSLOD=0.3574;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,6:20:7.72:8,0,9	1/1:0,10:10:23.05:122,23,0	0/1:7,0:4:6.46:6,0,56	0/0:11,0:4:12.04:0,12,155	0/1:5,12:17:38.09:100,0,38	1/1:4,23:27:27.23:277,27,0	0/1:10,7:17:9.20:9,0,118	0/1:10,12:22:99:147,0,222	1/1:4,11:15:0.32:146,0,0	0/1:2,18:20:12.70:224,0,13	0/1:4,10:14:36.91:63,0,37	1/1:4,17:21:10.96:161,11,0	0/1:4,13:17:24.93:125,0,25	0/1:5,17:22:6.28:137,0,6	1/1:4,16:20:9.27:188,9,0	1/1:7,21:28:3.12:270,3,0	0/1:8,14:22:92.44:112,0,92	0/1:3,9:12:49.72:112,0,50	1/1:6,2:8:10.91:81,11,0	0/1:12,9:21:25.12:25,0,35	1/1:4,7:11:2.04:14,2,0	1/1:2,15:17:6.97:125,7,0	0/1:6,13:19:17.44:80,0,17	0/1:2,9:11:19.31:19,0,28	1/1:3,15:18:34.99:209,35,0	0/0:24,2:26:47.06:0,47,1078	0/1:11,4:15:38.82:39,0,54	0/0:14,0:14:42.14:0,42,650
chr10	82518613	.	CGCGCT	C	9245.18	PASS	AB=0.729;AC=45;AF=0.804;AN=56;BaseQRankSum=12.347;DP=484;FS=15.200;HRun=0;HaplotypeScore=234.2950;InbreedingCoeff=0.2607;MQ=51.28;MQ0=3;MQRankSum=-9.877;QD=20.19;ReadPosRankSum=8.020;VQSLOD=2.4494;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,6:20:24.80:181,25,0	1/1:0,10:10:22.90:341,23,0	0/1:12,0:9:21.04:21,0,192	0/0:12,0:6:18.03:0,18,229	1/1:5,12:17:7.73:364,8,0	1/1:3,23:26:56.20:802,56,0	0/1:10,7:17:16.76:103,0,17	0/1:11,12:23:5.83:542,0,6	1/1:3,11:15:24.73:502,25,0	1/1:2,18:20:47.44:773,47,0	0/1:5,10:15:17.97:154,0,18	1/1:4,17:21:29.41:572,29,0	1/1:5,13:18:16.09:398,16,0	1/1:5,17:22:23.77:519,24,0	1/1:2,16:18:35.58:497,36,0	1/1:3,21:24:35.37:636,35,0	1/1:10,14:24:13.70:462,14,0	1/1:2,9:11:27.88:352,28,0	1/1:4,2:6:17.94:178,18,0	1/1:12,9:21:40.66:290,41,0	0/1:5,7:12:8.76:37,0,9	1/1:2,15:17:20.08:414,20,0	1/1:6,13:19:9.70:339,10,0	0/1:3,9:12:25.04:75,0,25	1/1:1,14:16:30.86:455,31,0	0/1:26,2:28:2.93:3,0,1398	1/1:10,4:14:14.77:236,15,0	0/0:14,0:14:42.10:0,42,889
chr10	82519383	.	GA	G	13087.46	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=11.282;DP=645;FS=6.788;HRun=5;HaplotypeScore=90.6836;InbreedingCoeff=0.9980;MQ=76.21;MQ0=0;MQRankSum=-3.231;QD=29.61;ReadPosRankSum=5.223;VQSLOD=4.9493;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.20:0,78,1013	1/1:0,10:10:24.07:272,24,0	0/0:16,0:16:24.27:0,24,417	0/0:18,0:18:45.13:0,45,599	1/1:3,33:36:93.26:1049,93,0	1/1:0,15:15:45.13:508,45,0	0/0:17,0:17:48.16:0,48,656	0/0:23,0:23:69.23:0,69,943	1/1:0,23:23:60.17:681,60,0	1/1:1,31:32:90.26:1019,90,0	1/1:4,20:24:60.17:681,60,0	1/1:0,30:30:84.24:953,84,0	1/1:0,10:10:27.08:306,27,0	1/1:0,27:27:81.23:919,81,0	1/1:2,31:33:78.22:885,78,0	1/1:2,23:25:60.17:681,60,0	1/1:0,17:17:45.13:510,45,0	1/1:2,26:28:75.21:850,75,0	0/0:15,0:15:45.13:0,45,567	0/0:26,0:26:69.23:0,69,944	1/1:0,20:20:51.15:579,51,0	1/1:2,27:29:75.21:848,75,0	1/1:4,20:24:54.15:613,54,0	1/1:0,28:28:69.20:782,69,0	1/1:0,31:31:84.24:953,84,0	0/0:33,0:33:96.31:0,96,1301	0/0:19,0:19:57.19:0,57,779	0/0:7,0:7:18.06:0,18,243
chr10	82520217	.	CTT	C	6762.10	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=5.345;DP=346;FS=2.447;HRun=11;HaplotypeScore=43.9443;InbreedingCoeff=0.7997;MQ=67.34;MQ0=3;MQRankSum=2.110;QD=22.84;ReadPosRankSum=0.770;VQSLOD=3.8584;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:19:48.12:511,48,0	1/1:1,5:6:14.95:144,15,0	0/0:7,0:3:2.89:0,3,46	0/0:11,0:7:6.01:0,6,58	1/1:1,9:10:21.03:223,21,0	1/1:2,13:15:36.08:383,36,0	1/1:2,6:8:15.03:160,15,0	1/1:13,31:44:47.45:888,47,0	1/1:0,5:5:12.03:128,12,0	1/1:3,9:12:27.06:287,27,0	1/1:2,12:14:36:368,36,0	1/1:4,4:8:9.01:96,9,0	1/1:1,3:4:9.02:96,9,0	1/1:0,6:6:15.04:160,15,0	1/1:0,6:6:18.05:192,18,0	1/1:1,9:10:18.04:192,18,0	1/1:2,16:18:48.12:511,48,0	1/1:3,21:23:51.13:543,51,0	1/1:4,14:18:42.07:447,42,0	1/1:1,7:8:18.03:191,18,0	1/1:3,6:9:18.03:192,18,0	1/1:4,2:6:5.99:63,6,0	1/1:4,7:11:15.03:160,15,0	1/1:0,3:3:6.02:64,6,0	1/1:0,18:19:45.11:479,45,0	0/0:9,0:9:27.06:0,27,356	1/1:1,11:11:27.03:287,27,0	0/0:22,0:22:56.66:0,57,796
chr10	82521086	.	C	CT	27621.25	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-12.675;DP=788;FS=1.368;HRun=2;HaplotypeScore=65.3058;InbreedingCoeff=0.9976;MQ=90.21;MQ0=0;MQRankSum=-8.951;QD=39.57;ReadPosRankSum=5.155;VQSLOD=5.0733;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,52:52:99:1934,129,0	1/1:0,12:12:33.11:495,33,0	0/0:31,0:31:89.01:0,89,1076	0/0:32,0:32:87.19:0,87,1070	1/1:1,23:25:75.21:1073,75,0	1/1:1,26:27:63.21:944,63,0	1/1:1,17:18:39.13:585,39,0	1/1:2,30:32:87.27:1263,87,0	1/1:1,30:31:81.27:1214,81,0	1/1:2,29:31:87.28:1284,87,0	1/1:2,20:22:54.14:784,54,0	1/1:1,32:33:90.30:1349,90,0	1/1:1,34:35:96.33:1439,96,0	1/1:1,27:28:66.01:958,66,0	1/1:2,33:35:93.31:1391,93,0	1/1:0,45:45:99:1844,123,0	1/1:1,28:29:69.23:1034,69,0	1/1:0,14:14:39.13:579,39,0	1/1:1,25:26:78.22:1090,78,0	1/1:0,27:27:78.04:1169,78,0	1/1:1,34:35:93.32:1394,93,0	1/1:3,17:20:48.16:719,48,0	1/1:0,29:29:84.28:1259,84,0	1/1:1,22:23:63.21:944,63,0	1/1:1,25:26:75.25:1124,75,0	0/0:21,0:21:63.20:0,63,818	1/1:3,39:43:99:1751,117,0	0/0:6,0:6:18.03:0,18,205
chr10	82521357	.	CA	C	11372.42	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=1.917;DP=599;FS=10.996;HRun=9;HaplotypeScore=63.1403;InbreedingCoeff=0.9086;MQ=78.31;MQ0=0;MQRankSum=-5.297;QD=22.00;ReadPosRankSum=3.949;VQSLOD=5.1538;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:41:99:1016,111,0	1/1:1,7:8:18:165,18,0	0/0:17,0:17:32.91:0,33,326	0/0:15,1:16:10.04:0,10,339	1/1:3,25:29:39.44:603,39,0	1/1:4,20:24:57.03:522,57,0	1/1:0,16:16:42.02:384,42,0	1/1:7,29:36:87:783,87,0	1/1:0,25:25:72.04:659,72,0	1/1:6,19:25:54.02:494,54,0	1/1:2,16:18:48.02:439,48,0	1/1:4,11:15:27.01:247,27,0	1/1:1,19:20:54.03:494,54,0	1/1:3,12:15:33.02:302,33,0	1/1:1,19:20:45.02:412,45,0	1/1:2,20:23:62.07:555,62,0	1/1:2,19:21:42.02:384,42,0	1/1:1,18:19:51.03:467,51,0	1/1:2,11:14:35.03:301,35,0	1/1:4,13:17:33.01:301,33,0	1/1:0,24:24:69.04:632,69,0	1/1:3,20:23:47.29:438,47,0	1/1:2,14:16:1.40:268,1,0	1/1:0,13:13:33.02:302,33,0	1/1:2,22:24:63.03:573,63,0	0/0:45,0:45:99:0,105,1175	1/1:7,24:31:69.01:631,69,0	0/0:4,0:4:9:0,9,83
chr10	82522428	.	T	TCAAA	30236.83	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-8.820;DP=785;FS=0.000;HRun=0;HaplotypeScore=103.1919;InbreedingCoeff=0.9809;MQ=62.10;MQ0=1;MQRankSum=-1.347;QD=43.26;ReadPosRankSum=1.294;VQSLOD=5.2529;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,20:34:69.71:1619,70,0	1/1:3,5:8:9.03:220,9,0	0/0:26,0:24:21.06:0,21,323	0/0:22,0:18:30.10:0,30,493	1/1:9,27:39:93.28:2155,93,0	1/1:10,21:32:57.20:1393,57,0	1/1:14,16:32:54.18:1286,54,0	1/1:34,6:42:39.11:831,39,0	1/1:11,13:25:48.16:1173,48,0	1/1:20,22:42:72.23:1680,72,0	1/1:6,20:27:60.12:1291,60,0	1/1:3,23:26:63.22:1508,63,0	1/1:6,10:17:33.11:805,33,0	1/1:12,16:28:54.19:1315,54,0	1/1:19,21:43:78.27:1768,78,0	1/1:11,18:30:57.20:1333,57,0	1/1:13,16:31:51.18:1247,51,0	1/1:5,10:16:27.09:660,27,0	1/1:10,10:23:45.09:900,45,0	1/1:5,17:25:54.18:1287,54,0	1/1:10,19:29:51.18:1247,51,0	1/1:16,19:36:22.96:1551,23,0	1/1:9,7:17:33.58:768,34,0	1/1:8,25:34:69.24:1687,69,0	1/1:9,12:25:36.12:881,36,0	0/0:29,0:29:57.19:0,57,933	1/1:10,25:36:69.19:1633,69,0	0/0:9,0:9:24.08:0,24,395
chr10	82523608	.	CA	C	5274.38	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=16.227;DP=652;FS=3.482;HRun=2;HaplotypeScore=80.7898;InbreedingCoeff=0.9984;MQ=83.67;MQ0=0;MQRankSum=-1.346;QD=33.17;ReadPosRankSum=-0.467;VQSLOD=4.6243;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:39:99:1263,102,0	0/0:8,0:8:21.07:0,21,315	0/0:21,0:20:57.18:0,57,805	0/0:30,0:30:71.88:0,72,996	0/0:24,0:24:72.22:0,72,1035	0/0:20,0:20:57.12:0,57,826	1/1:0,21:21:63.20:778,63,0	1/1:3,19:22:60.12:711,60,0	0/0:21,0:21:57.17:0,57,830	0/0:27,0:27:81.27:0,81,1197	0/0:20,0:20:54.17:0,54,787	0/0:20,0:20:60.20:0,60,899	0/0:29,0:29:84.28:0,84,1256	0/0:24,0:24:72.23:0,72,1042	0/0:23,0:23:69.23:0,69,1034	0/0:28,0:28:84.27:0,84,1236	0/0:31,0:31:93.23:0,93,1322	0/0:29,0:29:84.26:0,84,1236	1/1:1,18:19:57.09:684,57,0	1/1:2,21:23:63.14:762,63,0	0/0:42,0:42:99:0,119,1651	0/0:19,0:19:57.19:0,57,854	0/0:19,0:19:57.19:0,57,852	0/0:19,0:19:57.19:0,57,849	0/0:17,0:17:51.16:0,51,744	0/0:15,0:15:45.15:0,45,674	1/1:0,35:35:87.27:1076,87,0	0/0:7,0:7:21.07:0,21,313
chr10	82524742	.	T	TA	21441.78	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-11.021;DP=611;FS=9.903;HRun=1;HaplotypeScore=57.6141;InbreedingCoeff=0.9998;MQ=80.73;MQ0=0;MQRankSum=-7.542;QD=40.46;ReadPosRankSum=4.056;VQSLOD=4.9267;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:36.12:540,36,0	1/1:1,13:14:39.13:576,39,0	0/0:29,0:29:79.81:0,80,1016	0/0:17,0:17:48.13:0,48,580	1/1:1,22:23:63.21:944,63,0	1/1:0,15:15:42.14:630,42,0	1/1:0,20:20:57.19:854,57,0	1/1:1,33:34:96.30:1399,96,0	1/1:1,17:18:45.15:674,45,0	1/1:0,23:23:69.22:1014,69,0	1/1:1,13:14:39.09:559,39,0	1/1:0,26:26:66.22:989,66,0	1/1:1,33:34:84.28:1259,84,0	1/1:1,23:24:60.20:899,60,0	1/1:0,26:26:66.22:989,66,0	1/1:0,37:37:99:1574,105,0	1/1:1,24:25:66.22:989,66,0	1/1:0,15:15:45.15:674,45,0	1/1:1,25:26:75.25:1122,75,0	1/1:0,22:22:63.21:944,63,0	1/1:1,19:20:57.19:854,57,0	1/1:0,23:23:63.21:944,63,0	1/1:0,17:17:39.13:585,39,0	1/1:0,14:14:39.13:585,39,0	1/1:1,21:22:63.21:945,63,0	0/0:24,0:24:72.22:0,72,910	1/1:0,24:24:60.20:899,60,0	0/0:11,0:11:33.11:0,33,423
chr10	82527575	.	TTG	T	15339.58	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=2.330;DP=595;FS=1.562;HRun=0;HaplotypeScore=85.4150;InbreedingCoeff=0.9972;MQ=77.07;MQ0=5;MQRankSum=-2.761;QD=29.84;ReadPosRankSum=4.214;VQSLOD=6.1064;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,23:29:49.55:808,50,0	1/1:0,11:11:30.06:390,30,0	0/0:16,0:15:26.95:0,27,285	0/0:20,0:20:35.35:0,35,430	1/1:6,32:38:82.86:1139,83,0	1/1:0,17:16:36.12:493,36,0	1/1:3,13:16:23.75:298,24,0	1/1:2,27:29:66.48:901,66,0	1/1:1,18:19:39.13:534,39,0	1/1:0,28:28:81.14:976,81,0	1/1:2,27:27:72.15:942,72,0	1/1:0,24:24:54.18:740,54,0	1/1:0,18:18:36.12:492,36,0	1/1:1,17:18:30.10:411,30,0	1/1:2,18:20:39.13:534,39,0	1/1:2,13:15:38.43:454,38,0	1/1:2,23:25:51.17:697,51,0	1/1:1,10:11:24.04:307,24,0	1/1:1,21:22:62.34:733,62,0	1/1:1,13:14:41.67:480,42,0	1/1:2,12:14:40.94:524,41,0	1/1:2,23:24:65.67:757,66,0	1/1:5,23:27:56.28:698,56,0	1/1:2,9:11:24.08:327,24,0	1/1:2,25:27:75.21:992,75,0	0/0:34,0:34:96.14:0,96,1429	1/1:2,23:25:53.97:713,54,0	0/0:11,0:11:27.09:0,27,404
chr10	82527576	.	TG	T	7514.30	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=5.601;DP=582;FS=1.559;HRun=1;HaplotypeScore=101.3519;InbreedingCoeff=0.8340;MQ=77.46;MQ0=5;MQRankSum=-3.008;QD=14.51;ReadPosRankSum=4.514;VQSLOD=4.6528;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:28:47.43:366,47,0	1/1:11,0:11:29.45:181,29,0	0/1:16,0:15:33.13:33,0,206	0/0:20,0:20:45.53:0,46,404	1/1:34,4:38:82.04:650,82,0	1/1:17,0:16:35.30:214,35,0	1/1:13,1:14:23.60:166,24,0	1/1:28,0:28:66.26:417,66,0	1/1:18,0:18:38.25:232,38,0	1/1:28,0:28:79.85:535,80,0	1/1:29,0:27:70.64:432,71,0	1/1:24,0:24:52.96:322,53,0	1/1:18,0:18:35.29:214,35,0	1/1:18,0:18:29.42:178,29,0	1/1:19,0:19:38.25:232,38,0	1/1:13,2:15:38.42:283,38,0	1/1:23,0:24:52.96:322,53,0	1/1:10,1:11:23.56:144,24,0	1/1:21,0:21:59.53:383,60,0	1/1:13,1:14:34.98:256,35,0	1/1:14,0:14:41.29:267,41,0	1/1:24,1:24:64.20:416,64,0	1/1:24,2:25:55.46:382,55,0	1/1:9,1:10:23.50:141,23,0	1/1:27,0:27:73.53:452,74,0	0/0:33,0:33:96.72:0,97,1177	1/1:23,1:24:46.15:296,46,0	0/0:11,0:11:26.91:0,27,296
chr10	82529209	.	G	GT	7636.08	PASS	AB=0.900;AC=49;AF=0.875;AN=56;BaseQRankSum=1.597;DP=605;FS=0.000;HRun=9;HaplotypeScore=163.1752;InbreedingCoeff=0.8702;MQ=55.92;MQ0=5;MQRankSum=-2.304;QD=14.35;ReadPosRankSum=-0.755;VQSLOD=3.0187;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,34:37:93.08:1010,93,0	1/1:8,1:12:17.60:122,18,0	0/0:33,0:12:16.91:0,17,120	0/0:25,0:18:20.42:0,20,196	1/1:17,2:27:56.45:348,56,0	1/1:11,1:19:36.11:209,36,0	1/1:0,12:12:36.10:398,36,0	1/1:8,29:37:81.18:869,81,0	1/1:17,1:18:22.86:139,23,0	1/1:13,1:21:31.38:201,31,0	1/1:9,0:14:8.80:109,9,0	1/1:17,0:18:26.25:146,26,0	1/1:12,1:17:26:163,26,0	1/1:22,0:24:33.28:191,33,0	1/1:15,0:18:39.16:205,39,0	1/1:17,1:20:33.02:198,33,0	1/1:14,0:16:35.49:213,35,0	1/1:15,0:15:15.23:94,15,0	1/1:4,17:20:46.09:454,46,0	1/1:7,24:32:28.94:756,29,0	1/1:8,0:11:19.28:116,19,0	1/1:17,2:27:53.90:312,54,0	1/1:16,1:22:39.35:271,39,0	1/1:10,1:15:31.04:175,31,0	1/1:14,0:20:36.26:185,36,0	0/1:16,1:17:2.27:2,0,294	1/1:8,21:30:48.54:750,49,0	0/0:13,0:14:39.85:0,40,323
chr10	82529218	.	TG	T	4933.81	PASS	AB=0.973;AC=38;AF=0.679;AN=56;BaseQRankSum=11.187;DP=603;FS=3.401;HRun=1;HaplotypeScore=171.2506;InbreedingCoeff=0.8713;MQ=57.05;MQ0=5;MQRankSum=-10.704;QD=12.06;ReadPosRankSum=-4.788;VQSLOD=1.7687;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:80.87:0,81,530	1/1:10,1:11:28.03:171,28,0	0/1:37,1:15:1.25:1,0,288	0/0:27,0:20:12.85:0,13,285	1/1:26,1:27:70.06:428,70,0	1/1:20,1:21:53.03:329,53,0	0/0:17,0:17:40.47:0,40,273	0/1:33,1:34:10.91:11,0,315	1/1:18,0:16:37.77:245,38,0	1/1:17,4:20:49.40:331,49,0	1/1:14,1:15:31.96:203,32,0	1/1:16,0:15:37.88:245,38,0	1/1:17,1:18:39.93:265,40,0	1/1:19,3:21:42.42:295,42,0	1/1:14,2:16:43.59:314,44,0	1/1:20,0:18:45.81:266,46,0	1/1:18,0:16:43.47:269,43,0	1/1:14,3:16:34.55:304,35,0	0/0:20,0:19:16.51:0,17,239	0/0:29,0:29:80.48:0,80,511	1/1:10,0:10:24.09:138,24,0	1/1:25,4:29:65.04:404,65,0	1/1:18,1:18:43.66:257,44,0	1/1:17,0:16:36.53:215,37,0	1/1:17,5:22:44.60:243,45,0	0/0:18,0:17:40.05:0,40,572	0/0:30,0:30:72.12:0,72,451	0/0:14,0:14:17.87:0,18,437
chr10	82529242	.	TC	T	8732.26	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=4.442;DP=511;FS=37.212;HRun=3;HaplotypeScore=106.9075;InbreedingCoeff=0.9942;MQ=79.56;MQ0=1;MQRankSum=-7.278;QD=33.33;ReadPosRankSum=2.694;VQSLOD=2.3046;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1637	1/1:0,5:5:12.04:149,12,0	0/0:37,0:29:83.03:0,83,1100	0/0:21,0:19:42.04:0,42,560	1/1:1,21:22:54.17:669,54,0	1/1:0,14:14:39.12:483,39,0	0/0:20,0:20:60.20:0,60,860	0/0:29,0:29:84.70:0,85,1155	1/1:0,12:12:36.11:445,36,0	1/1:1,15:16:45.14:557,45,0	1/1:0,12:12:36.11:446,36,0	1/1:0,19:19:50.93:631,51,0	1/1:0,18:18:51.16:629,51,0	1/1:1,15:16:23.21:532,23,0	1/1:0,17:17:42.13:521,42,0	1/1:2,12:14:36.11:442,36,0	1/1:1,14:15:33.10:408,33,0	1/1:0,11:11:33.10:409,33,0	0/0:16,0:16:48.15:0,48,669	0/0:34,0:34:99:0,102,1464	1/1:1,8:9:24.08:297,24,0	1/1:0,17:17:48.15:594,48,0	1/1:0,15:15:39.12:483,39,0	1/1:0,11:11:30.09:371,30,0	1/1:1,18:19:54.17:665,54,0	0/0:17,0:17:51.17:0,51,735	0/0:26,0:26:78.26:0,78,1122	0/0:8,0:8:24.08:0,24,345
chr10	82530089	.	CG	C	10274.68	PASS	AB=0.528;AC=46;AF=0.885;AN=52;BaseQRankSum=5.293;DP=404;FS=5.879;HRun=1;HaplotypeScore=77.9713;InbreedingCoeff=0.5254;MQ=49.38;MQ0=12;MQRankSum=2.796;QD=27.77;ReadPosRankSum=0.265;VQSLOD=4.3520;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:24:51.17:660,51,0	1/1:0,3:3:9.03:117,9,0	./.	./.	1/1:0,15:14:36.12:467,36,0	1/1:0,10:10:21.07:272,21,0	1/1:2,13:14:36.12:467,36,0	1/1:1,26:23:66.15:833,66,0	1/1:3,9:11:27.09:349,27,0	1/1:1,7:6:15.05:195,15,0	1/1:1,12:11:24.08:311,24,0	1/1:2,21:22:45.46:748,45,0	1/1:0,13:12:33.11:428,33,0	1/1:3,5:6:6.02:78,6,0	1/1:0,17:17:39.13:506,39,0	1/1:1,17:18:3.37:575,3,0	1/1:1,26:23:60.20:778,60,0	0/1:1,14:15:5.61:464,0,6	0/1:2,12:12:11.83:392,0,12	1/1:1,10:9:24.08:309,24,0	1/1:9,10:13:21.07:272,21,0	1/1:2,12:14:30.10:389,30,0	1/1:12,0:11:2.92:35,3,0	1/1:0,14:14:36.12:467,36,0	1/1:1,14:14:36.12:467,36,0	0/0:25,0:24:69.24:0,69,1100	1/1:3,19:20:54.18:698,54,0	0/0:5,0:5:15.05:0,15,239
chr10	82530090	.	GC	G	10280.50	PASS	AB=1.000;AC=46;AF=0.885;AN=52;BaseQRankSum=5.293;DP=402;FS=5.879;HRun=1;HaplotypeScore=77.1058;InbreedingCoeff=0.5254;MQ=49.39;MQ0=12;MQRankSum=3.088;QD=27.94;ReadPosRankSum=0.368;VQSLOD=4.3611;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:51.17:660,51,0	1/1:3,0:3:9.03:117,9,0	./.	./.	1/1:15,0:14:36.12:467,36,0	1/1:10,0:10:21.07:272,21,0	1/1:14,0:13:36.12:467,36,0	1/1:27,0:23:66.15:833,66,0	1/1:12,0:11:27.09:349,27,0	1/1:8,0:6:15.05:195,15,0	1/1:12,0:10:24.08:311,24,0	1/1:23,0:22:45.21:748,45,0	1/1:13,0:12:33.11:428,33,0	1/1:8,0:6:6.02:78,6,0	1/1:17,0:17:39.13:506,39,0	1/1:18,0:18:3.50:575,4,0	1/1:27,0:23:60.20:778,60,0	0/1:15,0:15:5.76:464,0,6	0/1:14,0:12:11.82:392,0,12	1/1:11,0:9:24.08:309,24,0	1/1:19,0:13:21.07:272,21,0	1/1:14,0:14:30.10:389,30,0	1/1:1,11:11:2.92:41,3,0	1/1:14,0:14:36.12:467,36,0	1/1:15,0:14:36.12:467,36,0	0/0:25,0:24:69.23:0,69,1099	1/1:22,0:20:54.18:698,54,0	0/0:5,0:5:15.05:0,15,239
chr10	82530304	.	C	CT	3069.70	PASS	AB=1.000;AC=36;AF=0.667;AN=54;BaseQRankSum=-1.200;DP=300;FS=1.260;HRun=3;HaplotypeScore=38.4808;InbreedingCoeff=0.7100;MQ=60.63;MQ0=3;MQRankSum=-0.285;QD=16.96;ReadPosRankSum=1.480;VQSLOD=2.9974;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:0.85:1,0,67	1/1:1,4:5:15.02:185,15,0	0/0:7,0:7:11.90:0,12,97	0/0:15,0:11:8.90:0,9,105	1/1:2,11:13:14.97:168,15,0	1/1:4,5:9:12:136,12,0	0/0:13,0:13:5.49:0,5,111	0/0:24,0:20:36.26:0,36,310	1/1:1,8:9:13.29:166,13,0	1/1:5,11:16:36:401,36,0	1/1:6,5:11:29.18:304,29,0	1/1:0,7:7:21.07:279,21,0	1/1:2,8:10:5.10:49,5,0	1/1:0,8:7:9.03:122,9,0	1/1:2,5:7:15.05:194,15,0	1/1:0,7:7:15.01:186,15,0	1/1:5,18:22:33.38:424,33,0	1/1:1,7:8:15.05:207,15,0	0/0:21,0:18:8.71:0,9,108	0/0:8,0:8:2.38:0,2,83	1/1:2,4:6:15.04:193,15,0	./.	1/1:3,4:6:3.01:41,3,0	1/1:2,1:3:5.05:48,5,0	1/1:1,6:7:12.91:145,13,0	0/0:15,0:15:28.67:0,29,345	0/1:8,0:7:8.36:8,0,38	0/0:16,0:16:45.03:0,45,480
chr10	82530307	.	T	TA	1864.23	PASS	AB=0.862;AC=32;AF=0.593;AN=54;BaseQRankSum=1.227;DP=315;FS=4.945;HRun=14;HaplotypeScore=43.5091;InbreedingCoeff=-0.0595;MQ=61.86;MQ0=3;MQRankSum=1.462;QD=7.14;ReadPosRankSum=1.084;VQSLOD=1.9138;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:5,14:20:12.34:134,0,12	1/1:4,0:5:7.88:67,8,0	0/0:8,0:8:2.12:0,2,25	0/0:13,1:9:4.47:0,4,27	1/1:12,0:12:10.34:58,10,0	0/1:9,0:10:23.72:38,0,24	0/1:5,9:14:20.53:88,0,21	0/1:16,14:26:2.22:209,0,2	0/1:10,0:10:4.44:65,0,4	0/1:15,0:17:25.16:116,0,25	0/1:10,0:11:14.08:75,0,14	1/1:7,0:7:20.40:127,20,0	0/1:10,0:10:8.03:8,0,14	0/1:9,0:8:5.27:46,0,5	1/1:7,0:8:14.57:89,15,0	0/1:8,0:8:2.04:49,0,2	0/1:21,0:22:10.13:132,0,10	1/1:7,0:7:14.55:83,15,0	1/1:7,13:17:22.02:288,22,0	1/1:5,4:10:14.81:112,15,0	1/1:4,1:5:14.60:90,15,0	./.	1/1:6,0:5:2.98:21,3,0	0/1:3,0:3:8.89:9,0,13	0/1:8,0:8:5.92:41,0,6	0/0:15,1:16:4.79:0,5,154	0/1:1,6:7:4.37:78,0,4	0/0:16,0:16:35.37:0,35,230
chr10	82530449	.	AT	A	907.03	PASS	AB=0.873;AC=18;AF=0.333;AN=54;BaseQRankSum=-4.301;DP=318;FS=6.525;HRun=15;HaplotypeScore=66.5410;InbreedingCoeff=0.2168;MQ=65.32;MQ0=6;MQRankSum=1.481;QD=4.88;ReadPosRankSum=-1.083;VQSLOD=1.6455;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,7:20:24.04:109,0,24	./.	0/0:22,0:11:0.32:0,0,52	0/0:15,0:8:8.92:0,9,64	0/1:17,1:18:3.71:4,0,97	0/1:14,1:14:9.63:10,0,72	1/1:4,8:13:26.35:166,26,0	1/1:11,19:30:46.18:291,46,0	0/1:7,0:7:9.26:9,0,25	0/0:12,0:11:16.05:0,16,81	0/1:12,1:11:12.17:12,0,63	0/0:6,0:6:10.54:0,11,45	0/0:10,0:10:10.67:0,11,49	0/0:3,0:3:1.07:0,1,23	0/0:7,1:7:16.34:0,16,73	0/0:10,0:9:13.82:0,14,73	0/0:15,0:15:13.18:0,13,113	0/1:10,2:12:23.12:23,0,42	0/1:8,10:16:5.34:133,0,5	1/1:2,7:9:17.73:115,18,0	0/0:6,0:5:2.90:0,3,16	0/0:1,0:1:2.74:0,3,12	0/0:1,0:1:2.74:0,3,12	1/1:3,1:4:2.93:19,3,0	0/1:11,1:12:9.64:10,0,92	0/0:15,0:15:25.53:0,26,229	1/1:2,11:13:26.58:173,27,0	0/0:7,0:7:15:0,15,132
chr10	82530464	.	T	TA	847.43	PASS	AB=1.000;AC=31;AF=0.574;AN=54;BaseQRankSum=2.011;DP=287;FS=5.476;HRun=3;HaplotypeScore=70.2563;InbreedingCoeff=0.7324;MQ=59.30;MQ0=7;MQRankSum=2.289;QD=6.32;ReadPosRankSum=0.491;VQSLOD=0.5107;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:32.42:0,32,228	./.	0/0:17,0:8:9.42:0,9,65	0/0:12,0:6:8.97:0,9,81	1/1:18,1:19:20.67:102,21,0	1/1:13,1:13:29.12:169,29,0	0/0:10,0:10:26.45:0,26,163	0/0:28,0:26:45.09:0,45,397	1/1:6,0:6:6.57:30,7,0	1/1:10,1:10:16.67:120,17,0	1/1:9,1:8:11.99:68,12,0	1/1:5,0:5:4.73:15,5,0	1/1:7,0:7:11.90:61,12,0	0/1:5,0:5:13.37:36,0,13	1/1:9,0:8:9.89:44,10,0	1/1:6,0:6:3.90:16,4,0	1/1:11,3:14:23.05:147,23,0	1/1:12,0:12:26.54:138,27,0	0/0:20,0:19:21.22:0,21,229	0/0:7,0:7:17.65:0,18,110	0/0:2,0:1:0:0,0,0	1/1:1,0:1:2.04:6,2,0	1/1:2,0:2:2.04:6,2,0	1/1:1,0:1:2.97:20,3,0	1/1:12,0:12:11.52:65,12,0	0/0:14,0:13:25.82:0,26,322	0/0:18,0:17:47.18:0,47,298	0/0:7,0:7:18:0,18,188
chr10	82530660	.	T	TTA	213.84	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.274;DP=414;FS=1.974;HRun=0;HaplotypeScore=71.0168;InbreedingCoeff=0.7917;MQ=72.18;MQ0=6;MQRankSum=2.445;QD=11.25;ReadPosRankSum=-2.161;VQSLOD=3.1142;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:61.78:0,62,477	0/0:6,0:6:14.78:0,15,128	0/0:37,0:21:38.68:0,39,341	0/0:21,0:8:4.23:0,4,68	0/0:17,0:17:33.90:0,34,236	0/0:8,0:8:20.91:0,21,164	0/0:19,0:19:48.38:0,48,337	0/0:32,0:32:60.95:0,61,573	0/0:15,0:15:32.57:0,33,233	0/0:18,0:17:50.64:0,51,382	0/0:10,0:10:29.94:0,30,250	0/0:12,0:12:29.45:0,29,203	0/0:15,0:15:33.67:0,34,219	0/0:13,0:13:29.33:0,29,185	0/0:15,0:15:29.70:0,30,215	0/0:16,0:15:28.89:0,29,202	0/0:19,0:18:44.62:0,45,325	0/0:12,0:12:32.21:0,32,233	0/0:11,0:11:6.18:0,6,146	0/0:8,0:8:23.90:0,24,193	0/0:6,0:6:17.85:0,18,131	0/0:5,0:5:14.96:0,15,122	0/0:3,0:2:2.96:0,3,19	0/0:18,0:18:37.47:0,37,280	0/0:7,0:7:20.80:0,21,155	1/1:0,7:9:26.36:218,26,0	0/0:19,0:18:31.82:0,32,306	1/1:2,0:9:16.87:114,17,0
chr10	82530983	.	AACACACAC	A	1007.30	PASS	AC=24;AF=0.750;AN=32;BaseQRankSum=2.182;DP=429;FS=3.552;HRun=0;HaplotypeScore=89.2958;InbreedingCoeff=0.4036;MQ=53.01;MQ0=31;MQRankSum=-2.420;QD=5.17;ReadPosRankSum=0.952;VQSLOD=1.5705;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:25:3.01:56,3,0	./.	./.	./.	./.	./.	1/1:15,0:16:3.01:56,3,0	1/1:12,2:13:5.97:60,6,0	./.	./.	./.	0/0:14,0:13:0.47:0,0,1	1/1:9,6:15:3.01:75,3,0	1/1:19,0:20:6:81,6,0	1/1:11,3:14:6.49:150,6,0	1/1:8,3:11:3.01:75,3,0	1/1:20,1:21:3.01:122,3,0	0/0:10,0:9:2.90:0,3,16	1/1:5,1:5:3.01:75,3,0	1/1:7,2:8:3.01:69,3,0	1/1:21,0:19:2.79:24,3,0	./.	./.	./.	./.	0/0:12,0:11:17.80:0,18,414	1/1:19,2:20:15.04:276,15,0	0/0:9,0:9:9.50:0,10,291
chr10	82531045	.	A	AG	223.72	PASS	AB=0.883;AC=4;AF=0.071;AN=56;BaseQRankSum=2.290;DP=440;FS=1.459;HRun=15;HaplotypeScore=68.4120;InbreedingCoeff=0.2083;MQ=48.61;MQ0=52;MQRankSum=-1.506;QD=8.95;ReadPosRankSum=-0.707;VQSLOD=2.7780;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:45.33:0,45,568	0/1:4,1:4:35.72:36,0,57	0/0:37,0:9:26.54:0,27,289	0/0:36,0:10:25.33:0,25,262	0/0:14,0:13:17.65:0,18,227	0/0:7,0:6:9.02:0,9,112	0/0:18,0:15:39.12:0,39,486	0/0:32,0:22:57.09:0,57,674	0/0:12,0:12:20.99:0,21,218	0/0:10,0:6:18.02:0,18,219	0/0:5,0:5:6.02:0,6,78	0/0:13,1:13:4.08:0,4,222	0/0:11,0:10:15.89:0,16,166	0/0:16,0:15:24.01:0,24,271	0/0:14,0:12:17.28:0,17,222	0/0:18,0:16:23.76:0,24,311	0/0:24,0:19:35.99:0,36,407	0/0:11,0:9:0.20:0,0,149	0/0:11,0:9:20.90:0,21,260	0/0:10,0:8:11.95:0,12,139	0/0:23,0:18:16.95:0,17,200	0/0:10,0:9:5.86:0,6,77	0/0:10,0:8:5.91:0,6,72	0/0:13,0:12:14.30:0,14,192	0/0:16,0:14:15.04:0,15,176	0/1:13,1:13:32.66:216,0,33	0/0:18,0:17:23.94:0,24,269	1/1:2,4:4:5.85:76,6,0
chr10	82531093	.	A	AGAAGAG	14304.74	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-4.476;DP=449;FS=11.910;HRun=0;HaplotypeScore=63.1206;InbreedingCoeff=0.8257;MQ=49.76;MQ0=9;MQRankSum=-4.413;QD=35.76;ReadPosRankSum=1.682;VQSLOD=3.5471;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:45.04:710,45,0	1/1:0,4:4:9.03:277,9,0	0/0:10,0:4:5.18:0,5,156	0/0:11,0:7:20.93:0,21,261	1/1:1,13:17:30.10:732,30,0	1/1:0,13:16:15.05:517,15,0	1/1:14,4:18:18.11:828,18,0	1/1:25,0:21:53.98:685,54,0	1/1:0,14:17:14.71:536,15,0	1/1:1,12:13:36.07:819,36,0	1/1:0,9:11:14.86:216,15,0	1/1:2,18:20:27.09:898,27,0	1/1:1,22:26:21.07:736,21,0	1/1:1,19:22:27.09:957,27,0	1/1:1,8:8:12.04:417,12,0	1/1:1,15:17:12.51:427,13,0	1/1:2,14:19:12.04:428,12,0	1/1:1,7:10:15.05:536,15,0	1/1:2,8:8:24.03:611,24,0	1/1:0,11:12:23.88:452,24,0	1/1:1,14:15:9.03:302,9,0	1/1:1,14:19:33.04:905,33,0	1/1:1,9:13:9.75:323,10,0	1/1:0,13:18:3.01:91,3,0	1/1:2,27:32:42.14:1472,42,0	0/0:19,0:19:30.04:0,30,1059	1/1:0,16:18:12.04:430,12,0	0/0:9,0:9:21.05:0,21,426
chr10	82531771	.	TA	T	2083.97	PASS	AB=1.000;AC=30;AF=0.556;AN=54;BaseQRankSum=-2.938;DP=248;FS=2.476;HRun=4;HaplotypeScore=41.3723;InbreedingCoeff=0.5014;MQ=55.29;MQ0=2;MQRankSum=0.148;QD=13.44;ReadPosRankSum=-4.336;VQSLOD=0.7125;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:9:15:145,15,0	1/1:2,1:3:9:86,9,0	0/0:5,0:1:2.99:0,3,24	0/0:17,0:5:8.55:0,9,83	1/1:7,0:7:4.03:69,4,0	1/1:15,0:15:1.07:25,1,0	1/1:3,0:3:1.50:23,2,0	1/1:2,42:35:99:1115,100,0	1/1:0,5:4:6.02:71,6,0	0/1:9,0:9:1.36:42,0,1	1/1:7,0:7:7.06:99,7,0	0/0:9,0:9:4.62:0,5,11	0/0:7,0:7:2.49:0,2,6	0/0:5,0:5:3.74:0,4,10	0/0:2,0:2:1.25:0,1,3	0/0:4,0:4:1.25:0,1,3	0/1:12,0:12:2.28:29,0,2	1/1:6,0:6:3.97:38,4,0	1/1:3,8:10:18.05:204,18,0	1/1:0,9:8:15.04:167,15,0	1/1:1,2:3:6.01:64,6,0	./.	1/1:6,1:7:3:28,3,0	1/1:0,5:5:3.01:36,3,0	0/0:13,0:13:8.36:0,8,21	0/0:12,0:12:33.10:0,33,443	0/0:10,0:10:1.25:0,1,3	0/0:6,0:6:18.06:0,18,251
chr10	82531772	.	A	AAATAAAT	7178.69	PASS	AC=46;AF=0.852;AN=54;BaseQRankSum=0.733;DP=266;FS=8.259;HRun=0;HaplotypeScore=41.6792;InbreedingCoeff=0.5316;MQ=55.69;MQ0=2;MQRankSum=-4.105;QD=32.48;ReadPosRankSum=1.216;VQSLOD=2.7524;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:15.05:251,15,0	1/1:4,0:4:9:137,9,0	0/0:5,0:1:2.99:0,3,24	0/0:17,0:5:2.37:0,2,79	1/1:0,7:7:9.03:192,9,0	1/1:2,14:16:6.02:229,6,0	1/1:0,0:5:6.02:203,6,0	1/1:44,0:35:99:1296,102,0	1/1:5,0:4:6.02:96,6,0	1/1:1,8:9:18.06:638,18,0	1/1:0,8:9:18.05:317,18,0	1/1:0,7:12:12.04:483,12,0	1/1:0,6:8:6.02:241,6,0	1/1:0,3:5:9.03:362,9,0	1/1:0,2:2:3.01:121,3,0	1/1:1,0:5:3.01:108,3,0	1/1:1,10:14:12.04:398,12,0	1/1:0,6:8:9.03:362,9,0	1/1:11,0:10:18.06:314,18,0	1/1:9,0:8:15.05:201,15,0	1/1:3,0:3:9.02:168,9,0	./.	1/1:7,0:7:3.01:79,3,0	1/1:5,0:5:3.01:36,3,0	1/1:1,13:14:21.07:845,21,0	0/0:12,0:12:33.10:0,33,516	1/1:0,2:10:3.01:102,3,0	0/0:8,0:8:18.06:0,18,433
chr10	82540036	.	C	CAAA	9139.50	PASS	AB=0.583;AC=47;AF=0.839;AN=56;BaseQRankSum=-1.319;DP=656;FS=6.243;HRun=12;HaplotypeScore=93.7574;InbreedingCoeff=0.6674;MQ=52.20;MQ0=21;MQRankSum=-0.200;QD=16.77;ReadPosRankSum=0.926;VQSLOD=3.4998;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,12:18:13.86:225,14,0	1/1:1,5:8:9.03:135,9,0	0/0:36,0:8:5.97:0,6,63	0/0:35,0:6:5.14:0,5,27	1/1:10,15:27:53.53:727,54,0	1/1:2,17:22:22.32:388,22,0	1/1:2,10:12:15.03:239,15,0	1/1:16,22:42:69.86:794,70,0	1/1:5,14:21:23.95:327,24,0	1/1:8,21:31:72.09:1056,72,0	1/1:7,9:16:25.19:297,25,0	1/1:4,17:21:10.25:134,10,0	1/1:5,14:21:11.86:186,12,0	1/1:5,9:13:18.04:281,18,0	1/1:11,27:39:36.10:603,36,0	1/1:10,18:30:26.91:362,27,0	1/1:7,18:30:27.57:533,28,0	0/1:6,13:19:17.52:166,0,18	1/1:10,12:21:43.08:547,43,0	1/1:9,17:31:63.43:893,63,0	1/1:4,1:10:12:144,12,0	1/1:7,9:21:32.63:299,33,0	1/1:6,12:20:21.02:338,21,0	1/1:2,6:9:4.26:58,4,0	1/1:5,7:13:10.14:116,10,0	0/0:28,0:26:56.94:0,57,604	1/1:6,30:35:2.03:292,2,0	0/0:10,0:10:11.67:0,12,125
chr10	82542003	.	T	TA	21470.68	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=2.161;DP=642;FS=0.957;HRun=2;HaplotypeScore=88.1928;InbreedingCoeff=0.9890;MQ=87.56;MQ0=0;MQRankSum=-7.843;QD=39.04;ReadPosRankSum=3.955;VQSLOD=5.1154;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,40:41:99:1684,117,0	1/1:1,11:13:33.11:464,33,0	0/0:28,0:28:78.24:0,78,961	0/0:20,0:20:51.15:0,51,614	1/1:0,13:13:39.13:562,39,0	1/1:0,19:19:57.19:821,57,0	1/1:0,33:33:99:1426,99,0	1/1:1,26:27:72.23:1015,72,0	1/1:0,15:15:42.14:605,42,0	1/1:2,28:30:84.27:1189,84,0	1/1:0,8:8:18.06:259,18,0	1/1:2,25:27:72.24:1032,72,0	1/1:2,24:26:63.21:907,63,0	1/1:1,33:34:96.32:1381,96,0	1/1:2,24:25:69.23:994,69,0	1/1:1,14:15:42.14:605,42,0	1/1:2,31:33:90.30:1296,90,0	1/1:2,21:23:63.21:907,63,0	1/1:2,18:20:57.17:796,57,0	1/1:0,18:18:51.13:711,51,0	1/1:1,33:34:90.30:1296,90,0	1/1:2,19:21:51.17:734,51,0	1/1:0,15:15:42.61:606,43,0	1/1:1,21:22:54.18:778,54,0	1/1:1,16:17:45.11:625,45,0	0/0:37,1:38:59.08:0,59,1159	1/1:2,18:20:54.18:778,54,0	0/0:6,0:6:12.04:0,12,149
chr10	82542455	.	T	TCCTCCG	16440.74	PASS	AC=42;AF=0.913;AN=46;BaseQRankSum=-4.175;DP=402;FS=0.000;HRun=0;HaplotypeScore=76.3706;InbreedingCoeff=0.6003;MQ=56.84;MQ0=0;MQRankSum=-3.524;QD=43.04;ReadPosRankSum=2.486;VQSLOD=4.1702;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,13:29:30.10:923,30,0	1/1:0,3:5:9.03:258,9,0	./.	0/0:7,0:7:14.03:0,14,275	./.	./.	1/1:13,29:47:69.24:2222,69,0	1/1:4,14:24:60.10:1485,60,0	1/1:1,5:8:15.05:514,15,0	1/1:1,5:8:20.09:475,20,0	0/0:1,1:3:0.47:0,0,1	1/1:1,13:17:33.11:1130,33,0	1/1:0,9:12:30.10:993,30,0	1/1:0,7:10:21.07:719,21,0	1/1:1,8:12:15.05:513,15,0	1/1:2,5:8:12.04:386,12,0	1/1:8,12:24:36.12:1209,36,0	1/1:4,16:22:39.13:1341,39,0	1/1:10,5:19:29.51:593,30,0	1/1:0,2:4:3.01:103,3,0	1/1:24,29:65:33.80:1018,34,0	1/1:2,1:5:3.01:67,3,0	./.	1/1:10,17:30:29.38:930,29,0	1/1:2,7:11:15.05:463,15,0	1/1:3,9:19:32.91:897,33,0	1/1:1,2:3:6.02:203,6,0	./.
chr10	82543164	.	TG	T	1949.61	PASS	AB=0.944;AC=54;AF=0.964;AN=56;BaseQRankSum=-1.449;DP=146;FS=6.902;HRun=1;HaplotypeScore=40.5494;InbreedingCoeff=-0.0829;MQ=91.64;MQ0=1;MQRankSum=-3.683;QD=13.35;ReadPosRankSum=1.930;VQSLOD=2.4062;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:8.57:59,9,0	1/1:5,0:5:12.98:52,13,0	0/1:9,0:9:55.47:68,0,55	0/1:7,1:8:12.66:37,0,13	1/1:1,2:3:3.01:39,3,0	1/1:4,0:4:10.84:51,11,0	1/1:7,2:8:21.99:156,22,0	1/1:8,0:8:19.53:103,20,0	1/1:4,0:4:10.47:42,10,0	1/1:4,0:4:11.10:61,11,0	1/1:2,0:2:2.99:24,3,0	1/1:5,0:5:10.28:40,10,0	1/1:6,0:6:17.19:134,17,0	1/1:3,0:3:8.58:59,9,0	1/1:4,0:4:11.55:79,12,0	1/1:0,1:1:3.01:39,3,0	1/1:9,1:10:27.57:186,28,0	1/1:5,0:5:11.03:50,11,0	1/1:3,0:3:8.23:36,8,0	1/1:1,0:1:2.68:11,3,0	1/1:10,1:11:19.96:134,20,0	1/1:1,0:1:2.99:24,3,0	1/1:2,0:2:2.99:24,3,0	1/1:7,0:7:11.32:66,11,0	1/1:11,0:11:30.18:191,30,0	1/1:7,0:7:19.50:109,20,0	1/1:8,0:8:20.20:134,20,0	1/1:1,0:1:3.01:40,3,0
chr10	82543518	.	A	AG	12399.94	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-11.340;DP=513;FS=9.720;HRun=1;HaplotypeScore=51.8509;InbreedingCoeff=0.9908;MQ=84.56;MQ0=0;MQRankSum=-2.160;QD=39.74;ReadPosRankSum=3.813;VQSLOD=4.9161;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,120,1544	1/1:1,7:8:21.07:314,21,0	0/0:17,0:16:42.11:0,42,494	0/0:16,0:16:39.06:0,39,458	1/1:0,6:6:18.06:269,18,0	1/1:1,18:19:51.17:748,51,0	0/0:24,0:24:72.22:0,72,919	0/0:25,0:25:72.22:0,72,901	1/1:0,15:15:36.12:539,36,0	1/1:1,13:15:39.13:569,39,0	1/1:0,6:6:18.06:269,18,0	1/1:2,22:24:53.98:809,54,0	1/1:0,16:16:48.16:719,48,0	1/1:0,18:18:45.15:672,45,0	1/1:0,28:28:81.27:1213,81,0	1/1:2,20:22:63.19:905,63,0	1/1:1,27:28:75.25:1124,75,0	1/1:1,19:20:54.18:793,54,0	0/0:22,0:22:63.20:0,63,808	0/0:7,0:7:21.07:0,21,268	1/1:1,31:33:90.30:1345,90,0	1/1:0,8:8:21.07:314,21,0	1/1:0,8:8:21.07:314,21,0	1/1:1,20:21:54.18:809,54,0	1/1:0,17:17:45.15:673,45,0	0/0:18,1:19:12.27:0,12,656	0/0:13,0:13:39.13:0,39,505	0/0:13,0:13:36.12:0,36,467
chr10	82544400	.	CGT	C	4278.04	PASS	AB=0.735;AC=38;AF=0.704;AN=54;BaseQRankSum=-0.302;DP=640;FS=0.618;HRun=0;HaplotypeScore=90.4842;InbreedingCoeff=0.4404;MQ=65.36;MQ0=5;MQRankSum=1.551;QD=9.24;ReadPosRankSum=1.770;VQSLOD=4.6594;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:44:35.98:0,36,347	1/1:4,0:4:6.02:67,6,0	0/0:22,0:10:3.01:0,3,46	./.	1/1:14,10:25:20.89:213,21,0	1/1:8,10:19:20.56:215,21,0	0/0:23,0:34:20.65:0,21,192	0/1:20,5:25:16.24:158,0,16	1/1:11,7:20:23.73:229,24,0	0/1:11,13:25:9.26:275,0,9	1/1:8,8:17:9.02:101,9,0	0/0:19,0:32:21:0,21,183	1/1:8,11:19:15.04:168,15,0	1/1:10,11:23:32.76:330,33,0	1/1:12,6:19:17.88:182,18,0	1/1:11,14:27:29.75:296,30,0	0/1:16,14:31:2.92:283,0,3	0/1:8,7:17:0.24:172,0,0	1/1:9,5:14:12.03:130,12,0	1/1:7,10:17:15.04:166,15,0	1/1:22,10:31:5.95:67,6,0	1/1:10,13:25:26.74:263,27,0	1/1:13,0:13:6.01:66,6,0	1/1:8,16:26:41.78:430,42,0	0/1:8,10:19:24.62:161,0,25	0/0:24,0:23:27.56:0,28,392	1/1:11,12:25:29.61:296,30,0	0/1:19,0:19:12.15:12,0,230
chr10	82545115	.	G	GTTT	5557.96	PASS	AB=0.641;AC=44;AF=0.786;AN=56;BaseQRankSum=-0.104;DP=561;FS=33.139;HRun=15;HaplotypeScore=96.5184;InbreedingCoeff=0.4880;MQ=73.74;MQ0=3;MQRankSum=-2.654;QD=11.41;ReadPosRankSum=-2.867;VQSLOD=-0.5256;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:17:20.18:20,0,30	1/1:3,3:9:17.09:242,17,0	0/0:23,0:15:10.60:0,11,64	0/0:7,0:7:5.35:0,5,35	1/1:5,3:18:38.04:435,38,0	1/1:4,3:21:32.94:316,33,0	0/1:8,0:16:33.89:34,0,59	1/1:21,0:41:3.67:189,4,0	1/1:5,7:15:12.02:151,12,0	1/1:14,10:27:36.30:454,36,0	1/1:13,12:28:43.21:525,43,0	1/1:6,13:27:30.51:325,31,0	1/1:10,12:27:22.20:254,22,0	1/1:16,2:19:21.60:224,22,0	1/1:5,8:20:19.26:230,19,0	1/1:6,4:22:23.97:277,24,0	1/1:8,11:24:16.11:221,16,0	1/1:5,5:16:12.02:176,12,0	1/1:11,0:19:12.20:56,12,0	0/1:7,0:22:37.22:37,0,89	1/1:4,2:9:19.55:216,20,0	1/1:4,7:13:33:412,33,0	1/1:5,3:16:23.98:292,24,0	1/1:5,5:12:15.05:243,15,0	1/1:4,1:14:15.01:175,15,0	0/0:21,0:24:25.61:0,26,271	0/1:11,0:34:28.80:55,0,29	0/0:19,0:19:37.18:0,37,380
chr10	82545124	.	T	TTTT	5146.49	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=-1.261;DP=533;FS=28.153;HRun=8;HaplotypeScore=74.4267;InbreedingCoeff=0.4652;MQ=71.25;MQ0=5;MQRankSum=-0.593;QD=11.24;ReadPosRankSum=-1.832;VQSLOD=0.2388;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:20.20:20,0,30	1/1:10,0:10:17.09:242,17,0	0/0:23,0:12:10.62:0,11,64	0/0:6,0:6:5.40:0,5,35	1/1:22,0:22:38.04:435,38,0	1/1:21,0:21:32.94:316,33,0	0/1:15,0:15:33.90:34,0,59	1/1:36,0:36:0.71:168,1,0	1/1:14,0:14:12.02:151,12,0	1/1:26,0:26:36.30:454,36,0	1/1:26,0:26:40.34:510,40,0	1/1:26,0:26:27.61:309,28,0	1/1:25,0:25:18.21:179,18,0	1/1:10,6:17:18.59:190,19,0	1/1:20,0:20:13.24:150,13,0	1/1:21,0:21:23.97:277,24,0	1/1:21,0:21:19.03:239,19,0	1/1:13,0:13:12.02:175,12,0	1/1:15,0:15:11.71:43,12,0	0/1:22,0:22:37.24:37,0,89	1/1:9,0:9:19.55:216,20,0	1/1:11,0:11:28.57:355,29,0	1/1:15,0:15:23.98:292,24,0	1/1:10,0:10:12.04:204,12,0	1/1:15,0:15:8.99:97,9,0	0/0:27,0:27:25.97:0,26,272	0/1:33,0:32:29.59:52,0,30	0/0:19,0:19:37.10:0,37,380
chr10	82546805	.	GGCTTTGAACTTGTGTAT	G	10113.43	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.451;DP=725;FS=13.264;HRun=0;HaplotypeScore=380.5101;InbreedingCoeff=0.9965;MQ=76.11;MQ0=0;MQRankSum=-12.113;QD=67.88;ReadPosRankSum=0.874;VQSLOD=3.0376;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,29:47:54.18:2541,54,0	0/0:13,0:13:39.13:0,39,2917	0/0:25,0:25:72.25:0,72,4618	0/0:32,0:32:90.31:0,90,5957	0/0:30,0:30:90.31:0,90,6757	0/0:21,0:21:63.22:0,63,5134	1/1:3,15:18:36.12:1762,36,0	1/1:13,9:22:27.03:996,27,0	0/0:19,0:19:54.19:0,54,4224	0/0:36,0:36:99:0,102,7869	0/0:17,0:17:48.16:0,48,3962	0/0:36,0:36:99:0,105,7528	0/0:28,0:28:78.27:0,78,5891	0/0:30,0:30:84.29:0,84,6716	0/0:31,0:31:90.31:0,90,6986	0/0:43,0:43:99:0,126,10210	0/0:25,0:25:69.24:0,69,5552	0/0:21,0:21:63.20:0,63,4409	1/1:6,5:11:15.02:490,15,0	1/1:7,16:23:39.13:1844,39,0	0/0:23,0:23:66.23:0,66,4931	0/0:28,0:28:78.27:0,78,5786	0/0:25,0:25:72.23:0,72,5661	0/0:24,0:24:69.24:0,69,4936	0/0:21,0:21:54.17:0,54,4058	0/0:30,0:30:90.30:0,90,6626	1/1:7,20:28:51.17:2480,51,0	0/0:18,0:18:54.19:0,54,4147
chr10	82547683	.	AACAT	A	7374.01	PASS	AB=0.889;AC=49;AF=0.875;AN=56;BaseQRankSum=4.512;DP=683;FS=3.326;HRun=0;HaplotypeScore=177.0667;InbreedingCoeff=0.5670;MQ=66.70;MQ0=8;MQRankSum=0.230;QD=12.41;ReadPosRankSum=5.849;VQSLOD=4.4239;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,1:28:10.56:103,11,0	0/1:7,1:8:4:63,0,4	0/0:32,0:24:41.68:0,42,552	0/0:37,0:34:8.56:0,9,885	1/1:26,0:26:8.93:87,9,0	1/1:21,1:22:23.42:281,23,0	1/1:21,0:20:33.07:460,33,0	1/1:14,23:36:68.94:704,69,0	1/1:23,3:26:32.94:354,33,0	1/1:29,1:30:59.99:682,60,0	0/0:17,2:19:0:0,0,0	1/1:26,0:26:63.10:772,63,0	1/1:20,0:20:17.77:139,18,0	1/1:25,0:25:45.01:580,45,0	1/1:34,2:36:18.01:182,18,0	1/1:44,0:44:44.66:435,45,0	1/1:15,0:15:14.80:126,15,0	1/1:8,0:7:3:26,3,0	1/1:13,0:13:23.16:291,23,0	1/1:25,0:25:47.69:534,48,0	1/1:26,0:26:41.53:395,42,0	1/1:22,3:25:5.57:50,6,0	1/1:27,1:28:5.78:43,6,0	1/1:29,0:28:8.62:75,9,0	1/1:24,2:26:2.93:26,3,0	1/1:15,0:15:30.07:378,30,0	1/1:26,2:28:28.55:430,29,0	1/1:7,0:7:14.98:157,15,0
chr10	82547695	.	TACATACAC	T	6902.36	PASS	AB=0.899;AC=35;AF=0.625;AN=56;BaseQRankSum=-1.107;DP=706;FS=7.314;HRun=0;HaplotypeScore=224.8728;InbreedingCoeff=-0.0467;MQ=55.34;MQ0=12;MQRankSum=1.032;QD=11.06;ReadPosRankSum=8.582;VQSLOD=2.0295;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:0.24:0,0,111	0/1:8,2:10:8.43:49,0,8	0/0:26,0:16:44.73:0,45,799	0/0:30,0:26:66.15:0,66,1768	0/1:9,19:28:57.71:86,0,58	1/1:19,4:22:9.69:436,10,0	0/1:24,0:23:18.49:18,0,203	0/1:38,0:36:99:279,0,236	1/1:22,3:24:8.82:401,9,0	1/1:21,7:27:42.56:949,43,0	0/0:3,13:17:0.15:0,0,0	1/1:25,5:29:40.06:1083,40,0	0/1:17,6:23:9.96:150,0,10	1/1:24,6:28:43.07:917,43,0	1/1:26,6:32:2.97:126,3,0	1/1:35,11:46:9.84:493,10,0	0/1:18,3:21:32.06:118,0,32	0/0:8,1:8:5.73:0,6,34	0/1:16,0:15:30.55:31,0,194	0/1:25,0:25:52.27:172,0,52	1/1:25,2:27:30.37:481,30,0	1/1:19,4:22:1.40:39,1,0	1/1:21,3:24:4.23:26,4,0	0/1:30,4:32:10.02:61,0,10	0/1:29,0:28:10.61:11,0,59	1/1:3,2:17:37.60:732,38,0	0/1:25,0:25:59.87:60,0,348	0/1:4,0:7:6.12:186,0,6
chr10	82547697	.	CAT	C	7130.62	PASS	AB=0.778;AC=44;AF=0.786;AN=56;BaseQRankSum=5.354;DP=704;FS=4.887;HRun=0;HaplotypeScore=181.1250;InbreedingCoeff=0.1072;MQ=53.35;MQ0=13;MQRankSum=1.751;QD=10.97;ReadPosRankSum=5.998;VQSLOD=4.3478;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,29:39:2.85:138,3,0	0/1:8,2:10:0.99:122,0,1	0/0:25,0:15:41.68:0,42,469	0/0:29,0:25:34.90:0,35,710	0/1:25,4:29:63.64:135,0,64	1/1:7,16:22:24.03:255,24,0	1/1:25,1:24:35.65:346,36,0	0/1:37,0:34:65.66:504,0,66	1/1:18,7:24:41.84:434,42,0	1/1:25,3:27:70.81:630,71,0	1/1:18,0:18:2.72:19,3,0	1/1:26,3:28:69.01:681,69,0	0/1:10,12:22:5.76:218,0,6	1/1:22,4:24:50.60:483,51,0	1/1:14,18:31:8.83:232,9,0	1/1:18,27:45:18.94:585,19,0	1/1:10,11:21:9.94:238,10,0	0/1:4,5:8:27.42:37,0,27	1/1:13,2:14:2.41:211,2,0	1/1:27,0:27:56.15:440,56,0	1/1:30,0:30:13.47:327,13,0	1/1:9,14:22:11.61:123,12,0	1/1:4,19:23:5.99:91,6,0	0/1:15,18:31:14.71:165,0,15	0/1:8,22:29:50.27:102,0,50	0/1:17,0:17:11.30:186,0,11	1/1:26,0:26:36.17:298,36,0	1/1:6,0:7:17.85:128,18,0
chr10	82547716	.	A	ACT	3145.07	PASS	AB=0.927;AC=32;AF=0.571;AN=56;BaseQRankSum=3.063;DP=714;FS=2.303;HRun=0;HaplotypeScore=221.6436;InbreedingCoeff=-0.0951;MQ=47.25;MQ0=20;MQRankSum=4.253;QD=5.22;ReadPosRankSum=2.856;VQSLOD=3.2486;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:20.69:0,21,154	0/1:6,4:10:2.72:93,0,3	0/0:11,0:7:20.93:0,21,235	0/0:26,0:19:53.98:0,54,595	0/1:35,1:36:63.34:139,0,63	1/1:22,0:21:10.66:140,11,0	0/1:29,0:27:99:106,0,149	0/1:44,0:40:42.01:42,0,585	1/1:21,3:23:28.51:294,29,0	0/1:22,4:25:37.68:276,0,38	0/1:17,0:17:20.08:53,0,20	0/1:22,4:25:18.83:175,0,19	0/1:22,1:23:47.76:148,0,48	1/1:30,1:28:4.61:203,5,0	1/1:28,0:27:5.55:170,6,0	1/1:40,3:43:17.34:302,17,0	1/1:19,2:21:24.34:291,24,0	0/1:11,0:10:26.82:27,0,66	0/1:20,0:17:39.38:39,0,234	0/1:24,0:24:41.74:42,0,76	1/1:27,1:27:1.13:124,1,0	1/1:23,1:22:20.40:180,20,0	1/1:23,0:23:1.61:58,2,0	0/1:36,1:35:23.05:204,0,23	0/1:22,2:23:29.36:150,0,29	0/0:30,0:28:62.77:0,63,360	0/1:18,2:31:64.34:64,0,128	0/0:8,0:8:10.38:0,10,85
chr10	82547720	.	A	ACTCTCT	11065.19	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=-3.136;DP=751;FS=1.828;HRun=0;HaplotypeScore=238.3524;InbreedingCoeff=0.5180;MQ=47.70;MQ0=20;MQRankSum=1.161;QD=16.15;ReadPosRankSum=-0.833;VQSLOD=4.3521;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:39:25.22:0,25,252	1/1:10,0:10:14.90:228,15,0	0/1:14,0:8:3.94:4,0,30	0/0:27,0:16:2.95:0,3,23	1/1:39,0:39:35.63:477,36,0	1/1:23,0:22:21.06:410,21,0	1/1:26,3:27:33.26:556,33,0	1/1:57,0:51:48.15:909,48,0	1/1:24,0:24:36.36:597,36,0	1/1:26,0:25:44.85:847,45,0	1/1:16,0:16:14.91:248,15,0	1/1:30,0:29:38.90:580,39,0	1/1:24,0:24:16.68:383,17,0	1/1:33,1:31:38.52:658,39,0	1/1:28,1:28:1.45:420,1,0	1/1:44,0:44:46.43:745,46,0	1/1:22,0:22:32.53:550,33,0	1/1:11,0:10:9.34:177,9,0	1/1:21,0:18:16.03:237,16,0	1/1:25,0:25:11.97:251,12,0	1/1:27,1:27:24.50:460,24,0	1/1:26,0:24:27.08:506,27,0	1/1:20,0:20:17.94:262,18,0	1/1:36,0:34:15.67:551,16,0	1/1:24,0:23:12.87:331,13,0	1/1:31,0:29:13.89:308,14,0	1/1:31,0:31:18.45:260,18,0	0/1:10,0:10:14.40:110,0,14
chr10	82548068	.	G	GGCT	24794.35	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-16.679;DP=789;FS=0.571;HRun=0;HaplotypeScore=107.2452;InbreedingCoeff=0.9998;MQ=72.82;MQ0=0;MQRankSum=-7.523;QD=52.87;ReadPosRankSum=5.733;VQSLOD=6.4344;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,181,2994	1/1:0,11:11:30.10:679,30,0	0/0:35,0:35:96.23:0,96,1462	0/0:25,0:24:63.16:0,63,956	1/1:0,26:29:60.21:1357,60,0	1/1:1,18:21:45.15:1020,45,0	0/0:29,0:29:87.28:0,87,1415	0/0:31,0:31:87.27:0,87,1379	1/1:2,21:23:54.19:1223,54,0	1/1:6,23:31:81.24:1777,81,0	1/1:2,22:26:57.20:1286,57,0	1/1:6,27:34:78.27:1765,78,0	1/1:4,31:36:90.31:2038,90,0	1/1:3,18:22:51.18:1154,51,0	1/1:2,42:45:99:2513,111,0	1/1:2,40:42:99:2649,117,0	1/1:0,19:20:42.14:952,42,0	1/1:0,12:12:36.12:815,36,0	0/0:27,0:27:78.26:0,78,1277	0/0:30,0:30:81.26:0,81,1324	1/1:5,28:33:59.81:1358,60,0	1/1:1,16:17:42.14:951,42,0	1/1:2,21:23:51.18:1154,51,0	1/1:2,15:17:42.14:951,42,0	1/1:6,20:26:51.18:1153,51,0	0/0:38,1:39:43.36:0,43,1731	0/0:33,0:33:96.33:0,96,1590	0/0:10,0:10:30.10:0,30,500
chr10	82549014	.	TACA	T	21505.97	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=4.408;DP=669;FS=7.999;HRun=0;HaplotypeScore=109.6832;InbreedingCoeff=0.9899;MQ=83.25;MQ0=0;MQRankSum=-6.095;QD=36.83;ReadPosRankSum=4.652;VQSLOD=5.7779;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:31:60.05:915,60,0	1/1:0,8:8:14.95:245,15,0	0/0:24,0:24:53.35:0,53,1183	0/0:19,0:19:48.12:0,48,885	1/1:2,26:28:66.09:1016,66,0	1/1:4,21:25:57.19:929,57,0	1/1:1,13:14:27.09:440,27,0	1/1:3,27:29:75.22:1174,75,0	1/1:1,22:23:57.19:928,57,0	1/1:2,29:31:87.28:1387,87,0	1/1:2,14:16:38.96:572,39,0	1/1:1,20:21:39.13:637,39,0	1/1:2,37:39:99:1743,111,0	1/1:0,20:20:42.14:684,42,0	1/1:0,35:35:87.23:1386,87,0	1/1:1,33:34:66.23:1076,66,0	1/1:1,24:25:59.81:979,60,0	1/1:0,8:8:18.06:294,18,0	1/1:1,14:15:42.13:645,42,0	1/1:1,23:24:56.99:836,57,0	1/1:2,22:24:54.05:850,54,0	1/1:0,21:21:48.16:784,48,0	1/1:1,23:24:54.01:818,54,0	1/1:2,23:25:48.16:784,48,0	1/1:0,19:19:51.17:833,51,0	0/0:34,0:34:17.62:0,18,1756	1/1:3,41:44:99:1552,99,0	0/0:8,0:8:24.08:0,24,536
chr10	82551538	.	CCAA	C	1671.99	PASS	AB=0.988;AC=21;AF=0.375;AN=56;BaseQRankSum=8.804;DP=611;FS=3.255;HRun=0;HaplotypeScore=129.9433;InbreedingCoeff=-0.2998;MQ=70.31;MQ0=2;MQRankSum=-2.358;QD=3.97;ReadPosRankSum=10.008;VQSLOD=1.1064;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:79.34:0,79,601	0/1:8,0:8:29.81:30,0,41	0/0:24,0:16:18.55:0,19,302	0/0:17,0:14:3.96:0,4,171	0/1:35,0:35:99:113,0,154	0/1:30,1:30:89.04:180,0,89	0/0:21,0:23:45.83:0,46,325	0/1:15,0:15:1.01:1,0,254	0/1:20,0:20:54.78:90,0,55	0/1:27,0:28:91.49:91,0,262	0/1:26,0:26:99:111,0,116	1/1:14,2:16:12.31:98,12,0	0/1:26,2:28:99:157,0,111	0/1:26,0:27:56.81:126,0,57	0/1:22,1:23:99:115,0,111	0/1:29,0:29:99:163,0,118	0/1:24,0:24:76.39:121,0,76	1/1:15,0:15:9.31:123,9,0	0/0:15,0:15:25.51:0,26,328	0/0:19,0:19:32.91:0,33,287	0/1:19,0:19:68.04:68,0,86	0/1:20,0:20:43.81:44,0,118	0/1:19,0:19:58.97:59,0,66	0/1:21,0:21:13.09:125,0,13	0/1:17,0:17:22.89:23,0,136	0/0:26,0:26:72.84:0,73,756	0/0:27,0:27:61.13:0,61,403	0/0:7,0:7:20.85:0,21,247
chr10	82551539	.	CAAA	C	8092.36	PASS	AB=0.692;AC=41;AF=0.732;AN=56;BaseQRankSum=-9.460;DP=612;FS=0.000;HRun=14;HaplotypeScore=111.1608;InbreedingCoeff=0.4318;MQ=70.30;MQ0=2;MQRankSum=-2.454;QD=15.65;ReadPosRankSum=4.998;VQSLOD=3.5834;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:32:33.15:0,33,142	1/1:1,7:8:14.96:175,15,0	0/1:21,0:17:12.67:13,0,217	0/1:17,0:14:11.77:12,0,74	1/1:3,30:35:53.83:631,54,0	1/1:7,22:30:63:719,63,0	0/1:5,1:24:4.88:5,0,82	0/1:5,1:15:9.58:23,0,10	1/1:3,15:19:25.61:313,26,0	1/1:13,14:28:47.28:488,47,0	1/1:5,19:25:43.56:523,44,0	1/1:2,12:16:28.53:331,29,0	1/1:8,18:27:40.42:470,40,0	1/1:5,21:27:44.88:509,45,0	1/1:6,15:23:44.98:508,45,0	1/1:7,21:29:59.94:683,60,0	1/1:4,18:24:44.72:491,45,0	1/1:1,13:14:30.05:351,30,0	0/1:9,1:15:18.85:19,0,72	0/1:5,2:19:22.22:52,0,22	1/1:3,13:19:38.86:404,39,0	1/1:3,12:19:30.49:346,30,0	1/1:3,14:19:24.49:295,24,0	1/1:2,18:21:48.04:544,48,0	0/1:5,11:17:1.93:188,0,2	0/0:16,0:27:33.46:0,33,248	0/0:8,1:29:23.23:0,23,123	0/0:4,0:7:14.49:0,14,148
chr10	82570534	.	AT	A	2518.58	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=7.618;DP=467;FS=0.000;HRun=3;HaplotypeScore=60.7197;InbreedingCoeff=0.7875;MQ=63.62;MQ0=17;MQRankSum=-0.184;QD=8.15;ReadPosRankSum=-0.076;VQSLOD=0.3661;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:51.59:0,52,412	1/1:7,0:7:12.54:73,13,0	0/1:49,0:11:10.29:10,0,79	0/1:30,0:15:16.35:16,0,66	1/1:10,0:10:21.86:135,22,0	1/1:21,0:21:50.42:307,50,0	0/0:14,0:14:31.49:0,31,240	0/0:27,0:24:59:0,59,478	1/1:9,0:8:16.54:82,17,0	1/1:4,17:21:46.69:266,47,0	1/1:17,0:17:36.79:252,37,0	1/1:11,0:10:21.40:148,21,0	1/1:11,0:11:25.50:173,26,0	1/1:10,0:10:26.49:196,26,0	1/1:13,0:13:27.58:155,28,0	1/1:9,0:9:23.26:162,23,0	1/1:2,24:26:2.92:17,3,0	1/1:13,0:12:23.21:119,23,0	0/0:11,0:11:24.92:0,25,260	0/0:20,0:19:44.11:0,44,334	1/1:10,0:10:19.33:145,19,0	1/1:3,0:3:8.87:63,9,0	1/1:5,0:7:6.20:40,6,0	1/1:15,0:15:33.66:194,34,0	1/1:16,0:16:25.74:174,26,0	0/0:11,0:11:23.94:0,24,210	0/0:24,0:24:62.45:0,62,541	0/0:26,0:23:54.48:0,54,371
chr10	82570714	.	AC	A	15069.34	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=12.952;DP=644;FS=6.622;HRun=1;HaplotypeScore=62.8518;InbreedingCoeff=0.9994;MQ=75.46;MQ0=0;MQRankSum=-6.588;QD=38.54;ReadPosRankSum=7.407;VQSLOD=4.4865;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.28:0,93,1435	1/1:0,10:10:30.10:418,30,0	0/0:20,0:20:60.19:0,60,868	0/0:34,0:33:96.24:0,96,1493	1/1:0,18:18:54.18:755,54,0	1/1:0,29:29:81.27:1132,81,0	0/0:22,0:22:66.21:0,66,1015	0/0:48,0:48:99:0,141,2166	1/1:0,22:22:60.20:839,60,0	1/1:1,26:27:78.23:1055,78,0	1/1:0,11:11:33.02:417,33,0	1/1:0,19:19:51.17:713,51,0	1/1:0,26:26:75.25:1046,75,0	1/1:0,18:18:51.13:691,51,0	1/1:0,32:32:90.30:1258,90,0	1/1:0,25:25:66.19:898,66,0	1/1:0,36:36:99:1384,99,0	1/1:0,16:16:42.11:562,42,0	0/0:29,0:29:87.29:0,87,1355	0/0:12,0:12:36.12:0,36,575	1/1:0,26:26:69.23:965,69,0	1/1:0,8:8:24.08:335,24,0	1/1:0,23:23:66.22:922,66,0	1/1:0,32:32:81.27:1133,81,0	1/1:0,13:13:39.13:545,39,0	0/0:22,0:22:66.21:0,66,1011	0/0:26,0:26:78.23:0,78,1186	0/0:9,0:9:27.09:0,27,431
chr10	82572464	.	AAT	A	14143.50	PASS	AB=0.917;AC=37;AF=0.661;AN=56;BaseQRankSum=7.914;DP=606;FS=2.307;HRun=0;HaplotypeScore=81.5064;InbreedingCoeff=0.9202;MQ=71.64;MQ0=10;MQRankSum=-1.136;QD=34.84;ReadPosRankSum=8.060;VQSLOD=6.6976;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,2020	1/1:1,13:14:36.08:510,36,0	0/0:19,0:18:54.08:0,54,864	0/0:26,0:21:32.72:0,33,681	1/1:0,29:27:75.13:1057,75,0	1/1:0,17:16:42.14:635,42,0	0/0:19,0:19:57.17:0,57,1046	0/0:31,0:31:90.30:0,90,1664	1/1:0,23:22:51.17:771,51,0	1/1:0,24:24:66.21:974,66,0	1/1:2,15:16:39.06:543,39,0	1/1:0,24:23:54.18:817,54,0	1/1:2,15:17:36.12:545,36,0	1/1:0,28:28:75.25:1134,75,0	1/1:0,21:21:54.18:817,54,0	1/1:0,15:15:30.10:454,30,0	1/1:1,24:25:66.22:998,66,0	1/1:1,25:26:63.21:953,63,0	0/0:17,0:17:51.17:0,51,933	0/0:16,0:16:48.15:0,48,873	1/1:1,19:20:45.15:681,45,0	1/1:0,16:16:41.99:557,42,0	1/1:1,19:20:51.17:770,51,0	1/1:0,28:28:78.26:1180,78,0	1/1:1,19:19:45.15:681,45,0	0/1:20,2:22:66.87:67,0,902	0/0:17,0:17:48.15:0,48,875	0/0:17,0:17:51.13:0,51,895
chr10	82572472	.	T	TC	899.45	PASS	AB=0.595;AC=3;AF=0.054;AN=56;BaseQRankSum=-7.543;DP=624;FS=4.101;HRun=7;HaplotypeScore=121.3779;InbreedingCoeff=0.7889;MQ=75.78;MQ0=9;MQRankSum=0.222;QD=23.06;ReadPosRankSum=-2.099;VQSLOD=1.8119;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:97.94:0,98,961	0/0:16,0:16:39.03:0,39,362	0/0:21,0:20:12.36:0,12,219	0/0:25,0:22:26.03:0,26,210	0/0:30,0:28:75:0,75,691	0/0:19,0:18:47.97:0,48,433	0/0:20,0:20:60.02:0,60,562	0/0:35,0:35:84.06:0,84,790	0/0:23,0:22:50.95:0,51,477	0/0:23,0:23:60.07:0,60,570	0/0:15,0:15:9.72:0,10,339	0/0:23,0:22:42.05:0,42,404	0/0:19,0:19:42.05:0,42,398	0/0:29,0:29:72.09:0,72,681	0/0:19,0:19:48.04:0,48,452	0/0:14,0:14:36.04:0,36,337	0/0:26,0:26:56.85:0,57,546	0/0:25,0:25:63.09:0,63,603	0/0:18,1:19:17.80:0,18,438	0/0:16,0:16:39.04:0,39,370	0/0:18,0:18:45.03:0,45,417	0/0:16,0:16:41.85:0,42,380	0/0:21,0:21:56.90:0,57,520	0/0:30,0:30:69.06:0,69,648	0/0:21,0:20:48.03:0,48,447	0/1:8,17:25:0.78:534,0,1	0/0:16,0:16:36.03:0,36,341	1/1:0,14:14:39.12:471,39,0
chr10	82572682	.	C	CAT	1933.82	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.210;DP=723;FS=16.625;HRun=0;HaplotypeScore=83.9680;InbreedingCoeff=0.9901;MQ=76.52;MQ0=0;MQRankSum=-2.999;QD=44.97;ReadPosRankSum=0.764;VQSLOD=3.6995;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.19:0,96,1284	0/0:10,0:10:30.03:0,30,394	0/0:20,0:20:57.18:0,57,787	0/0:23,0:22:62.83:0,63,791	0/0:14,0:14:38.80:0,39,537	0/0:17,0:17:48.11:0,48,645	0/0:41,0:41:99:0,120,1590	0/0:31,0:31:90.18:0,90,1095	0/0:31,0:31:90.24:0,90,1240	0/0:26,0:26:75.22:0,75,1033	0/0:20,0:20:60.17:0,60,826	0/0:32,0:32:93.15:0,93,1218	0/0:24,0:24:72.21:0,72,1001	0/0:39,0:39:99:0,111,1528	0/0:22,0:22:66.21:0,66,949	0/0:24,0:24:69.20:0,69,971	0/0:39,0:39:99:0,111,1527	0/0:24,0:24:63.13:0,63,877	0/0:23,0:23:69.14:0,69,899	0/0:16,0:16:48.16:0,48,705	0/0:64,0:64:99:0,184,2569	0/0:17,0:17:51.15:0,51,712	0/0:17,0:17:48.14:0,48,671	0/0:29,0:29:78.24:0,78,1104	0/0:22,0:22:60.14:0,60,803	1/1:2,35:37:23.11:1771,23,0	0/0:23,0:23:63.14:0,63,807	1/1:0,6:6:15.05:280,15,0
chr10	82573935	.	T	TTG	5712.85	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-1.849;DP=473;FS=10.044;HRun=0;HaplotypeScore=68.5547;InbreedingCoeff=0.8853;MQ=75.60;MQ0=15;MQRankSum=0.659;QD=15.96;ReadPosRankSum=2.394;VQSLOD=4.1323;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:11:10.77:0,11,153	1/1:2,0:7:4.73:35,5,0	0/0:43,0:17:27.30:0,27,298	0/1:23,0:12:1.52:2,0,93	1/1:34,0:34:51.68:483,52,0	1/1:19,0:19:49.26:383,49,0	0/0:7,0:7:13.77:0,14,102	0/0:11,0:11:32.87:0,33,266	1/1:14,0:13:8.42:183,8,0	1/1:1,19:21:62.21:538,62,0	1/1:14,0:14:29.30:225,29,0	1/1:9,0:9:20.90:164,21,0	1/1:18,0:18:44.80:360,45,0	1/1:14,0:13:35.91:295,36,0	1/1:14,0:14:29.94:287,30,0	1/1:20,0:19:40.23:305,40,0	1/1:8,0:8:23.71:177,24,0	1/1:5,0:5:15:130,15,0	0/0:10,0:10:11.88:0,12,210	0/0:15,0:15:13.05:0,13,207	1/1:11,0:11:16.50:119,17,0	1/1:22,0:22:55.51:432,56,0	1/1:27,0:26:59.56:415,60,0	1/1:8,0:8:14.48:102,14,0	1/1:13,0:13:31.39:253,31,0	1/1:17,0:18:53.49:437,53,0	0/0:16,0:16:37.48:0,37,238	1/1:35,0:37:53.98:388,54,0
chr10	82574221	.	AAG	A	14373.93	PASS	AB=0.857;AC=37;AF=0.661;AN=56;BaseQRankSum=5.003;DP=707;FS=10.274;HRun=0;HaplotypeScore=96.7964;InbreedingCoeff=0.9197;MQ=78.47;MQ0=2;MQRankSum=-3.202;QD=31.11;ReadPosRankSum=6.442;VQSLOD=6.2356;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:84.27:0,84,1427	1/1:0,8:8:21.07:280,21,0	0/0:22,0:22:57.19:0,57,919	0/0:21,0:21:44.74:0,45,705	1/1:3,23:26:54.18:718,54,0	1/1:3,29:31:72.24:959,72,0	0/0:31,0:31:93.32:0,93,1597	0/0:43,0:43:99:0,114,1944	1/1:1,19:20:48.16:639,48,0	1/1:1,20:21:60.17:781,60,0	1/1:1,15:16:39.13:519,39,0	1/1:3,30:33:69.23:919,69,0	1/1:1,32:33:90.30:1198,90,0	1/1:1,28:28:78.26:1039,78,0	1/1:4,26:30:69.23:919,69,0	1/1:3,18:21:48.16:639,48,0	1/1:2,26:28:72.24:959,72,0	1/1:1,17:18:48.16:639,48,0	0/0:25,0:25:66.23:0,66,1128	0/0:24,0:24:63.22:0,63,1085	1/1:0,39:38:96.32:1279,96,0	1/1:1,14:15:45.15:598,45,0	1/1:1,15:16:36.01:479,36,0	1/1:2,29:31:81.27:1079,81,0	1/1:4,18:22:48.16:639,48,0	0/1:20,4:23:93.57:94,0,869	0/0:25,0:25:63.22:0,63,1085	0/0:21,0:21:60.20:0,60,1018
chr10	82575474	.	TAGTG	T	7166.76	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.088;DP=650;FS=1.605;HRun=0;HaplotypeScore=107.4941;InbreedingCoeff=0.9966;MQ=78.21;MQ0=1;MQRankSum=-4.860;QD=46.84;ReadPosRankSum=-2.264;VQSLOD=4.6238;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:33.07:600,33,0	0/0:5,0:5:15.05:0,15,411	0/0:15,0:15:45.13:0,45,1139	0/0:16,0:16:42.11:0,42,961	0/0:35,0:35:99:0,99,2695	0/0:23,0:23:66.21:0,66,1734	1/1:1,18:19:48.16:930,48,0	1/1:4,31:35:90.21:1602,90,0	0/0:16,0:16:45.14:0,45,1165	0/0:27,0:27:81.27:0,81,2160	0/0:33,0:33:99:0,99,2642	0/0:24,0:24:72.25:0,72,1971	0/0:28,0:28:81.28:0,81,2181	0/0:27,0:27:81.28:0,81,2217	0/0:36,0:35:99:0,105,2866	0/0:23,0:23:69.24:0,69,1881	0/0:16,0:16:39.13:0,39,1067	0/0:18,0:18:51.18:0,51,1387	1/1:1,15:16:45.12:828,45,0	1/1:1,31:31:87.26:1639,87,0	0/0:11,0:11:33.11:0,33,904	0/0:15,0:15:39.13:0,39,1066	0/0:25,0:25:75.26:0,75,2006	0/0:18,0:18:51.18:0,51,1382	0/0:31,0:31:93.32:0,93,2425	0/0:30,0:30:90.31:0,90,2441	1/1:1,33:34:81.28:1568,81,0	0/0:25,0:25:75.21:0,75,1803
chr10	82578400	.	T	TA	2945.45	PASS	AB=0.763;AC=43;AF=0.768;AN=56;BaseQRankSum=-2.540;DP=554;FS=3.761;HRun=16;HaplotypeScore=70.9539;InbreedingCoeff=-0.1458;MQ=78.77;MQ0=6;MQRankSum=0.814;QD=5.74;ReadPosRankSum=0.588;VQSLOD=2.7450;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,21:41:31.82:131,0,32	1/1:6,8:14:7.19:150,7,0	0/0:40,0:22:18.16:0,18,95	0/1:37,0:19:10.23:14,0,10	1/1:10,20:31:29.59:302,30,0	1/1:6,18:24:17.55:224,18,0	1/1:5,9:14:9.48:144,9,0	0/1:11,2:16:2.12:81,0,2	1/1:10,2:11:3.27:89,3,0	0/1:20,3:23:20.64:101,0,21	1/1:7,21:30:22.12:238,22,0	0/1:11,2:13:6.98:100,0,7	1/1:10,8:18:12.62:129,13,0	0/1:11,1:12:24.90:37,0,25	0/1:5,12:17:4.79:60,0,5	1/1:3,12:16:2.29:96,2,0	1/1:6,15:21:10.17:174,10,0	1/1:4,13:17:1.59:103,2,0	0/1:6,1:7:19.91:24,0,20	1/1:6,13:22:18.22:187,18,0	1/1:1,7:8:5.99:48,6,0	0/1:10,10:22:9.63:111,0,10	1/1:5,10:16:1.61:84,2,0	1/1:2,4:6:2.99:24,3,0	0/1:5,14:19:1.72:80,0,2	1/1:17,0:18:42.44:185,42,0	0/1:13,19:32:18.58:135,0,19	1/1:6,0:6:10.11:37,10,0
chr10	82578407	.	A	AG	101.83	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.504;DP=560;FS=6.125;HRun=0;HaplotypeScore=74.2189;InbreedingCoeff=0.7767;MQ=75.55;MQ0=6;MQRankSum=-2.789;QD=3.64;ReadPosRankSum=2.028;VQSLOD=2.3637;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:46.45:0,46,406	0/0:13,0:13:21.51:0,22,152	0/0:49,0:23:23.15:0,23,303	0/0:39,0:20:36.46:0,36,286	0/0:30,0:30:57.96:0,58,410	0/0:23,0:23:23.88:0,24,170	0/0:14,0:14:20.55:0,21,126	0/0:18,0:18:46.75:0,47,381	0/0:9,0:8:16.87:0,17,113	0/0:25,0:25:59.02:0,59,507	0/0:32,0:32:63.81:0,64,461	0/0:14,0:14:32.74:0,33,255	0/0:16,0:16:28.43:0,28,207	0/0:10,0:10:27.07:0,27,254	0/0:16,0:16:16.68:0,17,133	0/0:17,0:17:26.56:0,27,201	0/0:26,0:26:35.49:0,35,260	0/0:18,0:18:9.69:0,10,93	0/0:6,0:6:16.74:0,17,151	0/0:21,0:21:41.79:0,42,286	0/0:9,0:9:8.49:0,8,59	0/0:22,0:22:43.37:0,43,373	0/0:19,0:19:30.07:0,30,264	0/0:4,0:4:1.25:0,1,3	0/0:20,0:20:18.24:0,18,141	1/1:17,3:20:5.28:105,5,0	0/0:27,0:27:22.53:0,23,220	1/1:1,7:8:10.58:100,11,0
chr10	82578409	.	A	AG	218.24	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.024;DP=565;FS=0.747;HRun=0;HaplotypeScore=74.1185;InbreedingCoeff=0.8064;MQ=74.71;MQ0=6;MQRankSum=-4.792;QD=7.79;ReadPosRankSum=4.385;VQSLOD=3.5865;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:45.25:0,45,391	0/0:13,0:13:24.52:0,25,182	0/0:48,0:22:44.75:0,45,348	0/0:39,0:20:30.67:0,31,282	0/0:31,0:31:61.44:0,61,435	0/0:22,0:22:20.87:0,21,143	0/0:13,0:13:18.54:0,19,105	0/0:17,0:17:43.76:0,44,351	0/0:10,0:9:19.11:0,19,135	0/0:25,0:25:61.83:0,62,523	0/0:33,0:33:63.94:0,64,451	0/0:13,0:13:29.87:0,30,227	0/0:16,0:16:31.12:0,31,228	0/0:10,0:10:27.07:0,27,254	0/0:16,0:16:16.68:0,17,133	0/0:17,0:17:26.88:0,27,205	0/0:28,0:28:44.84:0,45,338	0/0:18,0:18:13.35:0,13,119	0/0:7,0:7:16.74:0,17,151	0/0:23,0:23:44.79:0,45,313	0/0:9,0:9:8.45:0,8,52	0/0:21,0:21:43.68:0,44,373	0/0:19,0:19:30.08:0,30,265	0/0:4,0:4:1.25:0,1,3	0/0:20,0:20:24.25:0,24,197	1/1:4,16:20:45.06:306,45,0	0/0:30,0:30:31.51:0,32,293	1/1:7,1:8:4.75:21,5,0
chr10	82578412	.	A	AAG	681.79	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.909;DP=575;FS=2.179;HRun=0;HaplotypeScore=79.8558;InbreedingCoeff=0.8865;MQ=73.04;MQ0=6;MQRankSum=-1.567;QD=24.35;ReadPosRankSum=3.752;VQSLOD=4.1021;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:42.93:0,43,405	0/0:14,0:14:40.03:0,40,292	0/0:47,0:21:42.21:0,42,350	0/0:39,0:19:34.46:0,34,294	0/0:32,0:32:62.60:0,63,564	0/0:21,0:21:38.20:0,38,260	0/0:12,0:12:10.80:0,11,133	0/0:17,0:17:43.36:0,43,333	0/0:10,0:9:26.51:0,27,203	0/0:25,0:25:64.14:0,64,581	0/0:34,0:34:60.57:0,61,549	0/0:13,0:13:35.72:0,36,308	0/0:16,0:16:41.53:0,42,308	0/0:9,0:9:16.84:0,17,210	0/0:16,0:16:20.78:0,21,168	0/0:17,0:17:23.51:0,24,249	0/0:30,0:30:62.35:0,62,480	0/0:19,0:19:32.30:0,32,223	0/0:8,0:8:20.91:0,21,190	0/0:25,0:25:52.82:0,53,457	0/0:9,0:9:11.82:0,12,83	0/0:22,0:22:46.86:0,47,422	0/0:21,0:21:21.45:0,21,271	0/0:5,0:5:5.92:0,6,43	0/0:20,0:20:29.73:0,30,245	1/1:4,16:20:60.02:668,60,0	0/0:30,0:30:53.37:0,53,456	1/1:7,1:8:12.03:130,12,0
chr10	82579544	.	TATTA	T	1647.12	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.457;DP=492;FS=0.000;HRun=0;HaplotypeScore=79.5252;InbreedingCoeff=0.9866;MQ=73.38;MQ0=0;MQRankSum=-3.254;QD=42.23;ReadPosRankSum=2.522;VQSLOD=3.9744;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.13:0,45,1067	0/0:13,0:13:36.12:0,36,808	0/0:15,0:15:26.65:0,27,587	0/0:8,0:8:15.05:0,15,295	0/0:17,0:17:45.15:0,45,1160	0/0:27,0:27:75.26:0,75,1921	0/0:13,0:13:36.12:0,36,874	0/0:25,0:25:66.22:0,66,1596	0/0:16,0:16:48.16:0,48,1206	0/0:23,0:23:63.22:0,63,1585	0/0:22,0:22:57.18:0,57,1312	0/0:13,0:13:30.10:0,30,746	0/0:17,0:17:51.18:0,51,1324	0/0:17,0:17:48.15:0,48,1139	0/0:13,0:13:33.11:0,33,849	0/0:17,0:17:51.17:0,51,1266	0/0:20,0:20:57.20:0,57,1411	0/0:19,0:19:57.20:0,57,1454	0/0:17,0:17:42.14:0,42,1021	0/0:20,0:20:51.17:0,51,1292	0/0:16,0:16:43.03:0,43,1046	0/0:14,0:14:36.12:0,36,892	0/0:15,0:15:45.14:0,45,1051	0/0:7,0:7:18.04:0,18,414	0/0:19,0:19:57.20:0,57,1455	1/1:4,20:24:60.19:1048,60,0	0/0:32,0:32:96.33:0,96,2364	1/1:0,15:15:42.10:721,42,0
chr10	82580756	.	C	CT	1153.65	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.082;DP=710;FS=2.296;HRun=2;HaplotypeScore=68.0997;InbreedingCoeff=0.9474;MQ=86.92;MQ0=0;MQRankSum=-1.986;QD=30.36;ReadPosRankSum=1.648;VQSLOD=3.3385;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.26:0,93,1126	0/0:12,0:13:33.03:0,33,409	0/0:27,0:27:78.16:0,78,903	0/0:29,0:29:67.59:0,68,829	0/0:29,0:29:87.26:0,87,1064	0/0:26,0:26:78.23:0,78,954	0/0:23,0:23:66.19:0,66,800	0/0:39,0:39:99:0,102,1250	0/0:31,0:31:93.27:0,93,1137	0/0:22,0:22:57.18:0,57,707	0/0:16,0:16:45.13:0,45,544	0/0:35,0:35:99:0,105,1289	0/0:29,0:29:87.27:0,87,1078	0/0:24,0:24:63.18:0,63,768	0/0:38,0:38:99:0,108,1326	0/0:32,0:31:90.26:0,90,1102	0/0:27,0:27:72.21:0,72,879	0/0:16,0:16:45.12:0,45,543	0/0:13,0:13:36.09:0,36,414	0/0:26,0:26:78.22:0,78,941	0/0:42,0:42:99:0,108,1326	0/0:18,0:18:48.15:0,48,595	0/0:20,0:20:60.18:0,60,731	0/0:27,0:27:78.24:0,78,966	0/0:22,0:22:63.18:0,63,761	1/1:2,25:27:6.86:1004,7,0	0/0:16,0:16:45.10:0,45,519	1/1:0,11:11:18.06:259,18,0
chr10	82582165	.	A	AGT	1952.56	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.343;DP=789;FS=4.951;HRun=0;HaplotypeScore=94.7485;InbreedingCoeff=0.9987;MQ=80.48;MQ0=0;MQRankSum=-3.069;QD=45.41;ReadPosRankSum=1.438;VQSLOD=5.1565;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1707	0/0:9,0:9:24.05:0,24,312	0/0:19,0:19:45.98:0,46,599	0/0:20,0:20:41.97:0,42,543	0/0:33,0:33:96.32:0,96,1414	0/0:26,0:26:75.25:0,75,1103	0/0:43,0:43:99:0,126,1834	0/0:40,0:40:99:0,111,1569	0/0:29,0:29:84.28:0,84,1234	0/0:27,0:27:81.27:0,81,1193	0/0:16,0:16:45.15:0,45,662	0/0:34,0:34:99:0,99,1419	0/0:23,0:23:63.21:0,63,926	0/0:29,0:29:81.22:0,81,1114	0/0:25,0:25:75.19:0,75,1008	0/0:28,0:28:84.28:0,84,1237	0/0:42,0:42:99:0,123,1808	0/0:24,0:24:66.22:0,66,969	0/0:20,0:20:57.19:0,57,838	0/0:33,0:33:90.30:0,90,1324	0/0:32,0:32:90.06:0,90,1252	0/0:34,0:34:99:0,99,1455	0/0:27,0:27:75.21:0,75,1043	0/0:34,0:34:99:0,99,1398	0/0:26,0:26:75.24:0,75,1085	1/1:4,24:29:31.07:1288,31,0	0/0:33,0:33:96.28:0,96,1366	1/1:0,14:14:42.14:787,42,0
chr10	82583392	.	G	GA	13000.09	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.345;DP=650;FS=4.589;HRun=10;HaplotypeScore=71.0551;InbreedingCoeff=0.7708;MQ=81.66;MQ0=1;MQRankSum=-5.830;QD=22.30;ReadPosRankSum=4.221;VQSLOD=5.7064;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:30:72.01:750,72,0	1/1:5,7:13:20.89:206,21,0	0/0:38,0:30:43.39:0,43,323	0/0:26,0:22:4.09:0,4,169	1/1:6,21:27:63.15:668,63,0	1/1:1,12:13:27.07:288,27,0	1/1:5,12:17:10.87:347,11,0	1/1:5,29:34:86.98:889,87,0	1/1:3,18:21:48.07:498,48,0	1/1:4,13:17:39.10:415,39,0	1/1:2,19:22:32.50:549,33,0	1/1:7,20:27:29.03:505,29,0	1/1:4,16:20:23.50:455,23,0	1/1:1,13:14:36.09:383,36,0	1/1:13,24:37:63.12:659,63,0	1/1:5,21:27:66:686,66,0	1/1:5,24:29:39.79:592,40,0	1/1:7,18:25:18.41:442,18,0	1/1:2,18:20:54.13:566,54,0	1/1:4,21:25:35.51:583,36,0	1/1:3,16:19:26.49:487,26,0	1/1:4,13:18:17.30:372,17,0	1/1:1,18:19:33.97:494,34,0	1/1:0,10:10:27.07:288,27,0	1/1:6,19:27:26.22:452,26,0	1/1:9,29:37:27.81:829,28,0	1/1:6,19:27:3.54:533,4,0	1/1:1,6:7:6.02:64,6,0
chr10	82583625	.	T	TAAAA	539.92	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=4.652;DP=519;FS=2.132;HRun=0;HaplotypeScore=102.7701;InbreedingCoeff=0.7630;MQ=72.97;MQ0=3;MQRankSum=-2.215;QD=9.15;ReadPosRankSum=-1.613;VQSLOD=2.5842;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.28:0,81,1590	0/0:6,0:6:12.03:0,12,194	0/0:34,0:19:29.38:0,29,380	0/1:33,0:17:4.46:4,0,292	0/0:23,0:23:52.69:0,53,932	0/0:18,0:18:48.09:0,48,818	0/0:15,0:15:39.02:0,39,565	0/0:20,0:20:55.95:0,56,862	0/0:15,0:15:39.11:0,39,718	0/0:18,0:18:51.17:0,51,976	0/0:18,0:18:51.16:0,51,1004	0/0:21,0:21:51.05:0,51,899	0/0:11,0:11:27.06:0,27,467	0/0:18,0:18:48.11:0,48,878	0/0:17,0:17:47.36:0,47,886	0/0:20,0:20:54.18:0,54,1054	0/0:29,0:28:84.14:0,84,1578	0/0:20,0:19:60.19:0,60,1115	0/0:21,0:20:51.17:0,51,982	0/0:13,0:13:36.10:0,36,656	0/0:2,0:2:6.02:0,6,126	0/0:9,0:9:27.09:0,27,547	0/0:8,0:8:24.08:0,24,502	0/0:20,0:20:57.09:0,57,1108	0/0:21,0:21:63.21:0,63,1225	1/1:5,9:16:27.98:432,28,0	0/0:30,0:30:83.84:0,84,1619	1/1:1,3:8:11.84:223,12,0
chr10	82583730	.	G	GA	4182.53	PASS	AB=0.632;AC=15;AF=0.268;AN=56;BaseQRankSum=-11.904;DP=521;FS=1.713;HRun=10;HaplotypeScore=53.8025;InbreedingCoeff=0.8377;MQ=60.89;MQ0=3;MQRankSum=0.678;QD=22.25;ReadPosRankSum=-0.846;VQSLOD=4.2309;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,33:37:96.24:1023,96,0	0/0:10,0:9:23.95:0,24,194	0/0:11,0:9:3.14:0,3,64	0/0:9,0:10:13.51:0,14,89	0/0:27,0:27:65.88:0,66,541	0/0:12,0:12:26.97:0,27,222	1/1:5,17:21:48.12:512,48,0	1/1:11,18:26:7.80:464,8,0	0/0:15,0:15:38.95:0,39,320	0/0:21,0:20:47.92:0,48,391	0/0:24,0:25:52.95:0,53,424	0/0:12,1:13:3.95:0,4,236	0/0:13,0:13:35.95:0,36,295	0/0:16,0:15:35.93:0,36,293	0/0:16,1:17:44.92:0,45,369	0/0:14,0:14:32.95:0,33,271	0/0:33,0:33:85.90:0,86,695	0/0:13,0:13:28.96:0,29,227	1/1:4,16:19:45.11:480,45,0	1/1:5,20:25:35.43:559,35,0	0/0:9,0:9:17.95:0,18,144	0/0:14,0:13:23.95:0,24,197	0/0:20,0:20:44.93:0,45,369	0/0:18,0:18:47.93:0,48,394	0/0:18,0:18:35.92:0,36,296	0/1:10,14:23:22.85:378,0,23	1/1:2,14:15:33.08:351,33,0	1/1:0,14:14:39.10:416,39,0
chr10	82584398	.	C	CCACA	1768.80	PASS	AB=0.877;AC=30;AF=0.682;AN=44;BaseQRankSum=-4.035;DP=594;FS=0.000;HRun=0;HaplotypeScore=101.4796;InbreedingCoeff=0.3809;MQ=42.36;MQ0=73;MQRankSum=1.619;QD=4.59;ReadPosRankSum=0.009;VQSLOD=1.7575;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:27:3.89:0,4,30	./.	./.	./.	0/1:18,0:17:0:0,0,0	0/1:15,0:18:15.84:16,0,38	0/0:10,0:13:2.24:0,2,50	./.	1/1:16,5:18:9.03:183,9,0	1/1:13,10:23:24.37:249,24,0	./.	1/1:29,0:29:8.74:62,9,0	1/1:17,1:17:12.96:128,13,0	1/1:27,0:27:2.79:67,3,0	1/1:16,9:25:6.02:140,6,0	1/1:14,11:29:11.77:223,12,0	1/1:11,5:16:9.36:117,9,0	0/1:7,5:14:18.93:131,0,19	0/0:18,0:15:2.78:0,3,28	0/0:19,0:25:3:0,3,28	1/1:36,0:23:3.01:62,3,0	1/1:20,6:26:3.31:136,3,0	0/1:22,0:20:0:0,0,0	1/1:24,5:28:14.52:235,15,0	./.	1/1:18,0:16:13.07:81,13,0	0/0:16,0:19:9.01:0,9,84	1/1:5,1:4:5.98:71,6,0
chr10	82584399	.	C	CAC	1048.51	PASS	AB=1.000;AC=29;AF=0.659;AN=44;BaseQRankSum=-2.622;DP=613;FS=0.000;HRun=0;HaplotypeScore=95.1503;InbreedingCoeff=0.3905;MQ=41.87;MQ0=75;MQRankSum=0.590;QD=2.73;ReadPosRankSum=-0.281;VQSLOD=1.7521;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:27:2.38:0,2,14	./.	./.	./.	0/0:19,0:18:1.21:0,1,3	0/1:19,0:18:23.20:79,0,23	0/0:14,0:13:2.66:0,3,23	./.	1/1:22,0:19:9.01:95,9,0	1/1:23,0:23:11.84:92,12,0	./.	1/1:30,0:29:9:94,9,0	1/1:19,0:17:12.86:119,13,0	1/1:25,0:25:2.63:30,3,0	1/1:26,0:26:6:52,6,0	1/1:29,0:29:12.01:123,12,0	1/1:22,0:18:9.01:99,9,0	0/1:18,0:15:2.16:62,0,2	0/0:19,0:16:2.71:0,3,14	0/0:26,0:25:2.84:0,3,14	1/1:29,11:24:2.99:24,3,0	1/1:29,0:28:7.55:56,8,0	./.	1/1:34,0:30:18.01:190,18,0	0/1:24,0:22:0:0,0,0	1/1:18,0:16:5.92:20,6,0	0/0:21,0:19:8.52:0,9,42	1/1:6,0:4:3.01:43,3,0
chr10	82584477	.	CCACACACACACACA	C	1243.33	PASS	AB=0.906;AC=13;AF=0.271;AN=48;BaseQRankSum=4.978;DP=392;FS=0.000;HRun=0;HaplotypeScore=123.4653;InbreedingCoeff=0.0173;MQ=43.45;MQ0=40;MQRankSum=-4.188;QD=8.82;ReadPosRankSum=-2.852;VQSLOD=1.7323;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:17:9.03:0,9,291	./.	./.	./.	1/1:14,0:16:6.02:88,6,0	0/0:8,0:8:2.80:0,3,13	0/0:11,0:11:3.01:0,3,103	./.	0/0:9,0:7:7.97:0,8,48	0/1:18,0:16:31.40:31,0,296	0/0:7,0:6:5.99:0,6,60	0/1:13,2:14:99:218,0,142	0/1:11,1:14:56.54:163,0,57	1/1:12,2:12:9.03:288,9,0	0/1:13,0:14:16.93:52,0,17	0/1:13,1:15:39.77:217,0,40	0/0:15,0:12:12.01:0,12,180	0/0:14,0:13:8.86:0,9,95	0/0:14,0:11:3.01:0,3,112	0/0:5,0:5:6.01:0,6,126	0/0:34,0:27:20.98:0,21,197	0/0:19,0:19:8.94:0,9,71	0/1:14,0:15:14.98:119,0,15	0/0:19,0:18:2.98:0,3,21	1/1:6,1:7:3.01:116,3,0	0/1:11,0:12:13.54:92,0,14	0/0:8,0:9:15.05:0,15,462	0/0:1,0:1:3.01:0,3,46
chr10	82587101	.	TTG	T	2344.75	PASS	AB=0.988;AC=22;AF=0.393;AN=56;BaseQRankSum=0.857;DP=565;FS=1.061;HRun=0;HaplotypeScore=93.9972;InbreedingCoeff=-0.0786;MQ=70.03;MQ0=0;MQRankSum=-2.660;QD=7.47;ReadPosRankSum=-8.673;VQSLOD=0.9799;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.10:0,84,1177	1/1:4,0:4:5.84:34,6,0	0/0:23,0:17:10.68:0,11,357	0/0:22,0:18:15.49:0,15,285	1/1:30,0:30:3.50:331,4,0	0/1:22,0:22:57.48:113,0,57	0/0:14,0:14:42.09:0,42,584	0/0:44,0:44:99:0,129,1650	0/1:11,0:11:37.55:61,0,38	1/1:16,1:17:17.95:250,18,0	1/1:19,1:20:8.85:281,9,0	0/1:20,1:21:6.78:213,0,7	0/1:16,1:17:28.66:112,0,29	0/1:13,1:14:20.06:83,0,20	0/1:20,0:20:8.02:215,0,8	0/1:14,0:14:29.47:69,0,29	0/1:23,0:23:95.47:102,0,95	0/1:22,0:22:48.30:172,0,48	0/0:17,0:17:51.11:0,51,653	0/0:21,0:21:60.13:0,60,811	0/1:15,0:15:10.97:200,0,11	0/1:11,0:11:10.97:124,0,11	0/1:9,0:9:13.90:47,0,14	0/1:10,0:10:22.48:22,0,43	0/1:34,0:34:88.11:88,0,119	0/0:30,0:30:90.28:0,90,1314	0/0:42,0:42:99:0,117,1479	0/0:9,0:9:5.75:0,6,170
chr10	82587102	.	TG	T	5827.09	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=5.456;DP=565;FS=1.015;HRun=1;HaplotypeScore=75.1896;InbreedingCoeff=0.9391;MQ=71.58;MQ0=0;MQRankSum=-1.727;QD=17.98;ReadPosRankSum=-4.375;VQSLOD=3.7471;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.10:0,84,920	1/1:0,3:3:5.95:59,6,0	0/0:24,0:18:24.36:0,24,279	0/0:23,0:19:19.96:0,20,234	1/1:26,4:30:77.35:619,77,0	1/1:18,3:21:47.14:362,47,0	0/0:14,0:14:42.08:0,42,463	0/0:43,0:44:99:0,129,1331	1/1:11,0:11:22.45:145,22,0	1/1:16,1:17:48.21:432,48,0	1/1:20,0:20:53.50:442,54,0	1/1:17,4:21:49.80:472,50,0	1/1:14,3:17:42.30:309,42,0	1/1:14,0:14:34.93:243,35,0	1/1:17,3:20:52.56:446,53,0	1/1:13,2:15:36.03:272,36,0	1/1:21,3:24:46.40:362,46,0	1/1:23,0:23:49.02:340,49,0	0/0:17,0:17:50.93:0,51,513	0/0:21,0:21:60.10:0,60,641	1/1:14,1:15:38.54:309,39,0	1/1:10,1:11:26.93:218,27,0	1/1:9,0:9:19.72:148,20,0	1/1:8,2:10:15.51:123,16,0	1/1:35,0:35:73.18:526,73,0	0/0:30,0:30:90.22:0,90,1012	0/0:40,0:40:99:0,117,1164	0/1:8,0:8:0.26:0,0,126
chr10	82588749	.	C	CTCG	39356.88	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.250;DP=717;FS=15.424;HRun=0;HaplotypeScore=113.2547;InbreedingCoeff=0.9807;MQ=69.89;MQ0=0;MQRankSum=-7.209;QD=57.04;ReadPosRankSum=5.230;VQSLOD=6.0995;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:36:84.29:1980,84,0	1/1:0,9:10:30.10:708,30,0	0/0:14,0:15:40.95:0,41,564	0/0:12,0:12:11.46:0,11,111	1/1:1,23:24:33.11:774,33,0	1/1:3,17:21:51.18:1203,51,0	1/1:1,31:35:81.28:1898,81,0	1/1:4,22:28:84.11:1716,84,0	1/1:2,22:24:72.25:1689,72,0	1/1:5,15:22:63.14:1240,63,0	1/1:2,19:22:48.16:1092,48,0	1/1:1,33:35:93.32:2177,93,0	1/1:2,21:25:69.24:1612,69,0	1/1:0,23:23:66.06:1555,66,0	1/1:6,30:38:87.30:2051,87,0	1/1:4,16:21:50.99:1171,51,0	1/1:1,35:37:90.31:2123,90,0	1/1:3,36:40:99:2480,105,0	1/1:3,13:18:48.13:1014,48,0	1/1:3,9:12:27.09:624,27,0	1/1:5,34:41:92.95:2161,93,0	1/1:1,17:18:51.17:1177,51,0	1/1:3,21:24:44.79:1042,45,0	1/1:2,30:33:66.23:1559,66,0	1/1:5,19:24:57.18:1316,57,0	1/1:3,27:31:90.24:2057,90,0	1/1:1,31:33:90.31:2112,90,0	1/1:2,12:14:36.12:827,36,0
chr10	82589257	.	A	AACACACAC	6791.52	PASS	AB=0.985;AC=39;AF=0.696;AN=56;BaseQRankSum=-2.323;DP=817;FS=4.189;HRun=0;HaplotypeScore=213.5759;InbreedingCoeff=0.4826;MQ=56.83;MQ0=14;MQRankSum=-1.459;QD=11.12;ReadPosRankSum=-3.914;VQSLOD=2.9305;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:48.49:0,48,680	1/1:5,4:9:8.82:275,9,0	0/1:62,0:29:0.60:1,0,246	0/0:52,0:23:3.15:0,3,304	1/1:9,15:24:2.92:34,3,0	1/1:26,2:31:42:993,42,0	0/1:33,0:33:38.54:39,0,394	0/1:30,0:30:71.22:125,0,71	1/1:6,9:19:8.24:229,8,0	1/1:9,11:29:41.83:652,42,0	1/1:20,2:22:19.44:227,19,0	1/1:6,8:21:1.92:265,2,0	1/1:19,0:19:27.56:320,28,0	1/1:7,0:28:17.37:193,17,0	1/1:13,12:29:5.85:246,6,0	1/1:5,11:23:6.02:246,6,0	1/1:22,14:43:18.88:444,19,0	0/1:23,0:25:7.64:699,0,8	0/1:9,0:9:9.91:10,0,183	0/0:18,0:18:36.59:0,37,589	1/1:27,0:27:18.27:280,18,0	1/1:16,0:23:40.01:408,40,0	1/1:3,1:19:5.43:167,5,0	1/1:14,20:42:6.01:190,6,0	1/1:12,15:38:27.09:751,27,0	0/0:37,0:39:90.18:0,90,1765	0/0:32,0:31:48.12:0,48,792	0/0:15,0:16:36.08:0,36,688
chr10	82589275	.	CACAT	C	2479.54	PASS	AB=0.995;AC=28;AF=0.500;AN=56;BaseQRankSum=-4.290;DP=787;FS=0.408;HRun=0;HaplotypeScore=173.0172;InbreedingCoeff=-0.3116;MQ=53.40;MQ0=17;MQRankSum=3.474;QD=4.06;ReadPosRankSum=-5.991;VQSLOD=0.1298;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:44,5:47:16.16:271,16,0	0/1:12,0:11:13.51:14,0,70	0/0:47,0:18:13.08:0,13,409	0/0:53,0:26:66.61:0,67,996	0/1:24,0:23:30.82:31,0,52	0/1:30,0:30:99:181,0,181	0/1:26,1:27:23.28:197,0,23	1/1:32,1:33:51.09:501,51,0	0/1:19,0:18:32.31:32,0,67	0/1:28,0:27:88.68:89,0,145	0/1:21,0:21:30.60:31,0,92	0/1:26,0:26:59.07:100,0,59	0/1:17,0:17:37.67:69,0,38	0/1:28,0:28:38.49:38,0,152	0/1:25,0:24:13.17:13,0,74	0/1:24,0:23:45.79:46,0,52	0/1:32,0:32:20.36:20,0,128	0/1:28,0:28:99:163,0,318	1/1:13,0:13:26.73:234,27,0	0/1:19,1:20:41.87:67,0,42	0/1:26,0:25:44.17:84,0,44	0/1:23,0:23:99:124,0,127	0/0:18,0:18:10.02:0,10,56	1/1:37,0:37:5.09:95,5,0	0/1:34,0:34:67.02:67,0,174	0/0:40,0:40:99:0,113,2231	1/1:31,3:33:11.53:187,12,0	0/0:18,0:18:53.99:0,54,813
chr10	82589277	.	CAT	C	5740.74	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-2.102;DP=770;FS=6.883;HRun=0;HaplotypeScore=144.6082;InbreedingCoeff=0.1540;MQ=54.79;MQ0=16;MQRankSum=2.933;QD=9.68;ReadPosRankSum=-2.141;VQSLOD=3.8606;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,38:44:50.98:649,51,0	0/1:12,0:11:27.52:37,0,28	0/0:44,0:17:9.12:0,9,282	0/0:56,0:30:70.78:0,71,817	0/1:22,0:21:11.97:74,0,12	0/1:30,0:30:44.11:211,0,44	1/1:19,8:27:30.03:520,30,0	1/1:3,30:33:85.34:762,85,0	0/1:19,0:18:26.84:34,0,27	1/1:29,0:28:24.34:329,24,0	0/1:20,0:20:25.70:91,0,26	1/1:23,0:23:6.61:137,7,0	1/1:17,0:17:13.73:229,14,0	0/1:27,0:27:5.24:125,0,5	0/1:25,0:24:4.44:58,0,4	0/1:23,0:22:4.06:46,0,4	0/1:30,0:30:6.48:80,0,6	0/1:28,0:28:94.35:195,0,94	1/1:10,3:13:37.79:369,38,0	1/1:5,15:20:16.46:454,16,0	1/1:26,0:25:1.72:117,2,0	1/1:22,0:22:29.11:331,29,0	0/0:18,0:18:7.03:0,7,39	1/1:34,0:34:10.46:98,10,0	0/1:33,0:33:39.10:74,0,39	0/0:39,0:39:99:0,104,1606	1/1:9,25:33:54.64:722,55,0	0/0:18,0:18:42.66:0,43,595
chr10	82589357	.	GT	G	2438.20	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.433;DP=603;FS=6.309;HRun=3;HaplotypeScore=105.8631;InbreedingCoeff=0.9982;MQ=79.28;MQ0=0;MQRankSum=-14.947;QD=17.93;ReadPosRankSum=-2.370;VQSLOD=2.5172;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,20:30:53.58:401,54,0	0/0:7,0:7:18.05:0,18,239	0/0:23,0:23:29:0,29,717	0/0:20,0:20:47.32:0,47,724	0/0:27,0:27:78.25:0,78,1104	0/0:23,0:23:69.22:0,69,975	1/1:5,19:24:50.79:398,51,0	1/1:5,18:23:57.02:516,57,0	0/0:17,0:17:45.12:0,45,625	0/0:20,0:20:60.20:0,60,864	0/0:17,0:17:48.16:0,48,691	0/0:29,0:29:84.28:0,84,1209	0/0:18,0:18:54.18:0,54,777	0/0:22,0:22:66.16:0,66,891	0/0:22,0:22:63.21:0,63,906	0/0:20,0:20:57.19:0,57,821	0/0:24,0:24:69.23:0,69,993	0/0:23,0:23:66.22:0,66,951	1/1:3,14:17:45.03:416,45,0	1/1:1,18:19:47.87:384,48,0	0/0:27,0:27:81.27:0,81,1165	0/0:14,0:14:39.11:0,39,528	0/0:17,0:17:51.17:0,51,733	0/0:23,0:23:60.20:0,60,864	0/0:23,0:23:69.23:0,69,992	0/0:31,0:31:93.30:0,93,1322	1/1:2,21:23:64.82:512,65,0	0/0:19,0:19:57.19:0,57,821
chr10	82589361	.	GACCAT	G	5720.07	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.312;DP=587;FS=6.911;HRun=0;HaplotypeScore=138.5528;InbreedingCoeff=0.9983;MQ=81.47;MQ0=0;MQRankSum=-15.119;QD=48.48;ReadPosRankSum=-3.945;VQSLOD=3.9945;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:54.39:862,54,0	0/0:7,0:7:18.06:0,18,582	0/0:26,0:26:52.85:0,53,1762	0/0:23,0:23:66.23:0,66,1938	0/0:26,0:26:78.27:0,78,2507	0/0:25,0:25:75.24:0,75,2338	1/1:0,19:19:52.21:861,52,0	1/1:0,21:21:63.20:1150,63,0	0/0:16,0:16:45.15:0,45,1453	0/0:21,0:21:63.22:0,63,2037	0/0:16,0:16:45.15:0,45,1439	0/0:27,0:27:81.26:0,81,2512	0/0:18,0:18:54.19:0,54,1735	0/0:21,0:21:63.22:0,63,2026	0/0:21,0:21:63.22:0,63,2034	0/0:19,0:19:57.18:0,57,1759	0/0:23,0:23:69.20:0,69,2151	0/0:24,0:24:69.24:0,69,2131	1/1:2,14:16:48.06:882,48,0	1/1:0,18:18:52.42:888,52,0	0/0:28,0:28:84.25:0,84,2626	0/0:13,0:13:36.12:0,36,1163	0/0:17,0:17:51.18:0,51,1634	0/0:23,0:23:57.17:0,57,1729	0/0:24,0:24:66.23:0,66,2130	0/0:31,0:31:93.32:0,93,2987	1/1:1,21:22:62.70:1077,63,0	0/0:20,0:20:60.21:0,60,1888
chr10	82589642	.	A	AC	11312.37	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-2.252;DP=614;FS=0.339;HRun=5;HaplotypeScore=92.3484;InbreedingCoeff=0.9903;MQ=80.70;MQ0=0;MQRankSum=-5.388;QD=29.77;ReadPosRankSum=3.540;VQSLOD=5.1202;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:95.02:0,95,1036	1/1:1,5:5:9.03:118,9,0	0/0:25,0:25:53.04:0,53,527	0/0:21,0:20:35.84:0,36,309	1/1:3,22:25:62.48:757,62,0	1/1:4,21:25:54.14:685,54,0	0/0:28,0:28:81.04:0,81,821	0/0:25,0:25:63.08:0,63,643	1/1:0,10:10:30.10:393,30,0	1/1:2,17:19:54.08:618,54,0	1/1:2,13:15:36.06:453,36,0	1/1:9,13:22:60.11:701,60,0	1/1:6,16:22:57.15:703,57,0	1/1:5,6:11:30.08:363,30,0	1/1:3,18:21:51.13:633,51,0	1/1:6,15:21:57.11:681,57,0	1/1:13,28:41:99:1306,108,0	1/1:4,13:17:42.10:531,42,0	0/0:24,0:24:63.13:0,63,662	0/0:20,0:20:57.10:0,57,589	1/1:10,23:33:72.63:890,73,0	1/1:0,18:18:45.09:571,45,0	1/1:3,17:20:39.13:509,39,0	1/1:12,21:32:72.02:841,72,0	1/1:2,19:21:45.12:560,45,0	0/0:21,0:21:54.08:0,54,540	0/0:25,0:25:72.11:0,72,744	0/0:10,0:10:19.50:0,19,280
chr10	82589684	.	AGCT	A	9679.98	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=7.981;DP=591;FS=3.916;HRun=0;HaplotypeScore=116.6118;InbreedingCoeff=0.9557;MQ=73.89;MQ0=1;MQRankSum=-5.515;QD=25.14;ReadPosRankSum=4.665;VQSLOD=4.6681;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:36.11:0,36,675	1/1:2,9:10:27.09:389,27,0	0/0:23,0:22:11.43:0,11,419	0/0:21,0:20:36.11:0,36,602	1/1:17,4:21:18.50:232,19,0	1/1:12,12:24:45.15:628,45,0	0/0:22,0:22:48.15:0,48,925	0/0:25,0:25:33.10:0,33,628	1/1:5,11:16:33.10:451,33,0	1/1:10,5:15:24.08:345,24,0	1/1:9,5:14:9.50:130,10,0	1/1:4,14:18:39.13:553,39,0	1/1:3,12:15:33.11:475,33,0	1/1:3,10:13:33.11:469,33,0	1/1:4,14:18:45.11:624,45,0	1/1:2,24:26:72.24:1030,72,0	1/1:10,31:42:90.27:1273,90,0	1/1:4,24:28:60.17:841,60,0	0/0:15,0:15:24.06:0,24,408	0/0:15,0:15:15.04:0,15,270	1/1:16,28:43:54.44:774,54,0	1/1:13,2:15:14.96:171,15,0	1/1:9,2:11:6.02:86,6,0	1/1:10,23:32:53.77:770,54,0	1/1:13,8:21:33.10:439,33,0	0/0:19,0:19:24.08:0,24,489	0/0:23,0:23:33.21:0,33,1006	0/0:11,0:11:9.03:0,9,184
chr10	82593374	.	TTCTATG	T	25160.83	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=17.889;DP=797;FS=1.580;HRun=0;HaplotypeScore=186.5130;InbreedingCoeff=0.9979;MQ=69.56;MQ0=0;MQRankSum=-21.364;QD=52.53;ReadPosRankSum=6.669;VQSLOD=4.9595;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,4968	1/1:0,10:10:21.07:504,21,0	0/0:27,0:27:78.27:0,78,2574	0/0:26,0:26:69.24:0,69,2429	1/1:0,26:26:51.12:1173,51,0	1/1:1,19:20:48.16:1153,48,0	0/0:28,0:28:75.26:0,75,2587	0/0:37,0:37:99:0,102,3444	1/1:0,26:26:63.22:1452,63,0	1/1:1,26:27:75.25:1712,75,0	1/1:6,13:19:39.13:935,39,0	1/1:2,40:42:99:2564,108,0	1/1:2,36:38:78.15:1873,78,0	1/1:2,31:33:72.25:1698,72,0	1/1:0,47:47:99:2565,108,0	1/1:0,34:34:86.83:2089,87,0	1/1:1,17:17:29.70:720,30,0	1/1:0,15:15:27.09:649,27,0	0/0:23,0:23:69.24:0,69,2210	0/0:28,0:28:75.26:0,75,2541	1/1:2,22:24:36.12:865,36,0	1/1:1,29:30:75.26:1801,75,0	1/1:1,19:20:42.14:1009,42,0	1/1:3,18:21:30.10:721,30,0	1/1:3,26:29:72.20:1678,72,0	0/0:50,0:50:99:0,147,5034	0/0:43,0:43:99:0,129,4524	0/0:7,0:7:18.06:0,18,528
chr10	82594529	.	GAA	G	1783.87	PASS	AB=1.000;AC=10;AF=0.192;AN=52;BaseQRankSum=-4.991;DP=231;FS=0.000;HRun=10;HaplotypeScore=41.9182;InbreedingCoeff=0.4045;MQ=53.94;MQ0=8;MQRankSum=5.951;QD=17.15;ReadPosRankSum=0.759;VQSLOD=1.1331;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:16:8:8,0,242	./.	0/0:5,0:3:5.35:0,5,41	0/0:6,0:2:2.94:0,3,18	0/0:5,0:5:2.90:0,3,16	0/0:2,0:2:3:0,3,28	0/1:5,0:4:11.86:12,0,17	1/1:4,29:33:79.67:774,80,0	0/0:4,0:4:5.92:0,6,39	0/0:8,0:8:8.91:0,9,61	0/0:7,0:6:8.81:0,9,54	./.	0/0:4,0:4:5.93:0,6,40	0/0:5,0:4:2.97:0,3,20	0/0:2,0:2:5.71:0,6,32	0/0:1,0:1:2.98:0,3,21	0/0:18,0:18:21.20:0,21,173	0/0:8,0:9:17.96:0,18,154	1/1:3,15:18:45.03:468,45,0	1/1:0,14:14:27.06:292,27,0	0/0:3,0:3:2.97:0,3,20	0/0:5,0:5:2.97:0,3,20	0/0:3,0:2:2.97:0,3,20	0/0:3,0:3:3.37:0,3,16	0/0:3,0:3:2.97:0,3,20	0/0:14,0:14:33.08:0,33,447	1/1:1,15:17:35.83:380,36,0	0/0:18,0:17:41.07:0,41,733
chr10	82594538	.	A	AAAAAATAATATAT	4020.81	PASS	AB=1.000;AC=33;AF=0.635;AN=52;BaseQRankSum=-4.125;DP=219;FS=2.234;HRun=0;HaplotypeScore=86.7017;InbreedingCoeff=0.6189;MQ=59.31;MQ0=5;MQRankSum=-8.226;QD=53.61;ReadPosRankSum=-3.576;VQSLOD=2.8675;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:42.08:0,42,1111	./.	0/0:6,0:4:7.84:0,8,98	0/0:6,0:2:2.37:0,2,8	1/1:4,0:4:5.98:45,6,0	1/1:0,1:1:3.01:194,3,0	0/1:8,0:7:7.59:8,0,179	0/0:34,0:34:93.27:0,93,2310	1/1:2,0:2:6.02:140,6,0	1/1:3,0:3:9.03:125,9,0	1/1:8,0:7:12.02:207,12,0	./.	1/1:3,0:3:6.02:102,6,0	1/1:1,0:1:3.01:61,3,0	1/1:1,0:2:6.02:186,6,0	1/1:2,0:2:3.01:41,3,0	1/1:6,9:20:34.67:1559,35,0	1/1:5,4:10:24.04:1146,24,0	0/0:16,0:16:45.15:0,45,1253	0/0:17,0:17:36.10:0,36,959	1/1:2,0:2:3.01:39,3,0	1/1:2,0:2:3.01:41,3,0	1/1:2,0:2:3.01:40,3,0	1/1:2,0:2:2.96:19,3,0	1/1:3,0:3:5.98:68,6,0	0/0:12,0:12:36.12:0,36,1107	0/0:16,0:16:36.12:0,36,1112	0/0:17,0:17:51.18:0,51,1846
chr10	82596302	.	T	TG	18661.74	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=6.842;DP=686;FS=1.046;HRun=2;HaplotypeScore=114.2070;InbreedingCoeff=0.9996;MQ=80.61;MQ0=0;MQRankSum=-4.305;QD=38.24;ReadPosRankSum=6.657;VQSLOD=3.9921;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.20:0,75,913	1/1:0,13:13:32.80:475,33,0	0/0:21,0:21:61.69:0,62,703	0/0:13,0:13:30.08:0,30,346	1/1:2,19:21:33.11:475,33,0	1/1:1,15:16:42.14:603,42,0	0/0:29,0:29:84.23:0,84,1015	0/0:21,0:21:45.14:0,45,558	1/1:0,24:24:69.23:994,69,0	1/1:3,26:29:72.24:1034,72,0	1/1:1,11:12:30.10:432,30,0	1/1:0,32:32:93.31:1338,93,0	1/1:2,25:27:72.24:1032,72,0	1/1:1,26:27:75.25:1079,75,0	1/1:0,40:40:99:1594,111,0	1/1:0,35:35:99:1467,102,0	1/1:2,39:41:99:1636,114,0	1/1:1,21:22:60.20:864,60,0	0/0:12,0:12:33.10:0,33,409	0/0:18,0:18:45.14:0,45,556	1/1:4,63:67:99:2517,178,0	1/1:3,17:20:45.15:647,45,0	1/1:1,16:17:41.83:603,42,0	1/1:0,31:31:90.30:1292,90,0	1/1:0,14:14:42.10:580,42,0	0/0:18,0:18:54.17:0,54,669	0/0:28,0:28:84.26:0,84,1041	0/0:10,0:10:30.09:0,30,372
chr10	82596747	.	CT	C	16122	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=19.845;DP=779;FS=1.193;HRun=3;HaplotypeScore=118.7249;InbreedingCoeff=0.9994;MQ=90.44;MQ0=0;MQRankSum=-4.330;QD=33.59;ReadPosRankSum=5.588;VQSLOD=4.0609;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,1745	1/1:0,17:17:51.16:632,51,0	0/0:26,0:26:78.13:0,78,1035	0/0:37,0:37:90.29:0,90,1257	1/1:1,20:21:60.19:743,60,0	1/1:0,29:29:81.25:1004,81,0	0/0:39,0:39:99:0,117,1612	0/0:31,0:31:81.27:0,81,1165	1/1:1,22:23:66.20:812,66,0	1/1:0,31:31:93.27:1125,93,0	1/1:2,23:25:54.13:652,54,0	1/1:0,30:30:84.26:1041,84,0	1/1:0,18:18:51.16:632,51,0	1/1:1,22:23:60.19:744,60,0	1/1:2,40:42:99:1413,114,0	1/1:0,44:44:99:1488,120,0	1/1:1,25:26:69.22:855,69,0	1/1:0,19:19:47.87:594,48,0	0/0:20,0:20:60.19:0,60,847	0/0:26,0:26:78.26:0,78,1122	1/1:1,37:38:99:1339,108,0	1/1:0,15:15:45.14:558,45,0	1/1:1,20:21:57.18:706,57,0	1/1:1,30:31:81.25:1004,81,0	1/1:3,24:27:63.20:781,63,0	0/0:40,1:41:80.20:0,80,1584	0/0:30,0:30:81.25:0,81,1146	0/0:7,0:7:21.04:0,21,265
chr10	82597485	.	TA	T	3211.27	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-1.037;DP=440;FS=8.740;HRun=2;HaplotypeScore=64.6688;InbreedingCoeff=0.9317;MQ=71.32;MQ0=6;MQRankSum=-1.832;QD=11.72;ReadPosRankSum=-0.635;VQSLOD=1.0469;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:70.14:0,70,740	1/1:9,0:9:18.22:107,18,0	0/1:34,0:14:1.28:1,0,75	0/0:22,0:15:8.19:0,8,136	1/1:16,1:17:30.66:171,31,0	1/1:16,3:19:35.94:260,36,0	0/0:8,0:7:19.84:0,20,196	0/0:32,0:32:87.99:0,88,835	1/1:7,0:7:14.51:104,15,0	1/1:13,0:13:31.19:227,31,0	1/1:12,0:12:18.52:129,19,0	1/1:15,1:16:27.73:189,28,0	1/1:13,0:12:19.69:137,20,0	1/1:11,2:13:27.04:202,27,0	1/1:14,0:12:18.35:116,18,0	1/1:8,2:10:18.82:149,19,0	1/1:22,3:25:61.74:467,62,0	1/1:17,2:19:40.05:279,40,0	0/0:22,0:21:62.25:0,62,583	0/0:17,0:17:47.11:0,47,486	1/1:13,1:14:31.37:239,31,0	1/1:7,0:7:17.27:134,17,0	1/1:8,1:9:21.47:154,21,0	1/1:8,1:9:19.66:131,20,0	1/1:14,0:14:31.05:230,31,0	0/0:14,0:14:25.85:0,26,329	0/0:14,0:14:40.88:0,41,424	0/0:10,0:10:22.98:0,23,218
chr10	82597998	.	GA	G	9084.31	PASS	AB=0.758;AC=36;AF=0.643;AN=56;BaseQRankSum=14.568;DP=696;FS=8.703;HRun=10;HaplotypeScore=86.2729;InbreedingCoeff=0.8363;MQ=72.13;MQ0=0;MQRankSum=1.186;QD=19.83;ReadPosRankSum=3.509;VQSLOD=5.4156;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:29:49.15:0,49,762	1/1:0,13:13:35.99:312,36,0	0/1:20,1:19:41.16:41,0,112	0/0:12,0:10:11.99:0,12,113	1/1:3,26:29:38.79:565,39,0	1/1:3,18:21:50.95:436,51,0	0/0:20,0:21:59.97:0,60,633	0/0:33,1:34:67.17:0,67,941	1/1:3,22:25:59.98:521,60,0	1/1:7,33:40:98.93:852,99,0	1/1:5,17:22:44.92:384,45,0	1/1:5,21:26:62.98:547,63,0	1/1:1,16:18:47.03:397,47,0	1/1:1,23:24:65.98:570,66,0	1/1:6,23:29:65.98:573,66,0	1/1:3,17:20:53:449,53,0	1/1:2,26:28:71.98:625,72,0	1/1:8,23:32:62.02:526,62,0	0/0:24,1:25:33.98:0,34,571	0/0:35,0:35:81.22:0,81,896	1/1:4,19:23:53.98:469,54,0	0/1:5,18:23:9.32:386,0,9	1/1:1,25:26:68.98:599,69,0	1/1:2,13:15:35.99:312,36,0	1/1:0,23:23:59.99:521,60,0	0/0:23,2:25:8.06:0,8,531	0/0:36,1:37:82.29:0,82,1135	0/0:20,0:20:57.15:0,57,630
chr10	82599655	.	TACAC	T	1603.01	PASS	AB=0.862;AC=24;AF=0.444;AN=54;BaseQRankSum=3.494;DP=538;FS=18.267;HRun=0;HaplotypeScore=94.2066;InbreedingCoeff=-0.1676;MQ=67.72;MQ0=9;MQRankSum=1.150;QD=4.16;ReadPosRankSum=3.848;VQSLOD=0.3730;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:36:7.41:7,0,165	1/1:3,0:3:5.97:61,6,0	0/0:31,0:23:0.47:0,0,1	./.	0/1:19,8:26:14.42:85,0,14	0/1:12,5:17:29.12:189,0,29	0/1:16,0:22:34.89:60,0,35	0/0:21,0:21:3.01:0,3,37	0/1:18,8:26:11.93:127,0,12	0/1:13,2:15:25.96:67,0,26	1/1:6,6:12:2.88:46,3,0	0/1:13,0:13:29.94:38,0,30	0/0:6,0:6:2.68:0,3,11	0/1:23,0:23:31.80:32,0,59	0/0:12,0:16:2.74:0,3,12	1/1:18,7:23:18.06:279,18,0	0/1:18,11:29:7.09:212,0,7	0/1:14,1:15:26.94:63,0,27	0/0:13,0:13:8.85:0,9,81	0/0:10,0:15:9.03:0,9,144	0/1:25,2:27:26.02:26,0,142	0/0:5,0:9:5.74:0,6,37	0/1:14,3:17:6.62:41,0,7	0/1:27,2:28:5.36:170,0,5	0/1:12,1:14:10.70:101,0,11	1/1:13,0:20:13.70:100,14,0	0/0:9,0:13:10.25:0,10,117	1/1:8,0:10:6.01:56,6,0
chr10	82600576	.	C	CGA	2360.77	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-5.157;DP=619;FS=3.899;HRun=0;HaplotypeScore=109.2525;InbreedingCoeff=0.9283;MQ=60.55;MQ0=33;MQRankSum=1.922;QD=19.84;ReadPosRankSum=-1.599;VQSLOD=3.5773;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:24.06:0,24,324	0/0:8,0:8:21.03:0,21,321	0/0:25,0:14:27.11:0,27,523	0/0:36,0:19:29.34:0,29,521	0/0:16,0:16:26.99:0,27,326	0/0:20,0:19:31.85:0,32,489	0/0:24,0:22:41.91:0,42,645	1/1:13,25:37:61:1065,61,0	0/0:23,0:21:35.22:0,35,479	0/0:37,0:34:83.92:0,84,1147	0/0:14,0:13:24.08:0,24,349	0/0:24,0:22:46.59:0,47,617	0/0:14,0:13:23.16:0,23,345	0/0:17,0:17:39.08:0,39,572	0/0:19,0:19:51.16:0,51,764	0/0:14,0:14:28.13:0,28,419	0/0:22,0:19:39.85:0,40,535	0/0:12,0:9:18.02:0,18,229	1/1:23,0:23:2.16:389,2,0	1/1:38,0:37:50.26:740,50,0	0/0:27,0:23:30.10:0,30,451	0/0:17,0:17:35.77:0,36,546	0/0:16,0:14:27.08:0,27,382	0/0:27,0:24:25.98:0,26,353	0/0:22,0:22:45.04:0,45,687	0/0:23,0:23:52.11:0,52,778	1/1:19,0:19:13.31:316,13,0	0/0:17,0:14:36.01:0,36,498
chr10	82600630	.	CCACACACACACACA	C	1119.77	PASS	AB=1.000;AC=11;AF=0.239;AN=46;BaseQRankSum=2.619;DP=342;FS=8.804;HRun=0;HaplotypeScore=115.0699;InbreedingCoeff=0.6175;MQ=31.80;MQ0=43;MQRankSum=0.780;QD=12.17;ReadPosRankSum=-0.417;VQSLOD=1.7287;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,8:19:3.37:0,3,17	0/0:5,0:6:6.02:0,6,306	./.	./.	./.	0/0:7,0:9:9.03:0,9,348	1/1:13,2:13:2.80:20,3,0	1/1:15,8:21:17.94:288,18,0	0/1:17,0:15:0:0,0,0	0/0:16,0:12:24.08:0,24,1266	./.	0/0:22,0:19:18.46:0,18,549	0/0:7,0:7:18.06:0,18,749	0/0:11,0:11:5.66:0,6,272	0/0:10,0:11:5.51:0,6,179	./.	0/0:16,0:13:26.58:0,27,817	0/0:6,0:5:9.03:0,9,338	1/1:4,5:6:12.01:219,12,0	1/1:8,7:12:2.97:20,3,0	0/0:10,0:8:6.02:0,6,371	0/0:7,0:6:0.47:0,0,1	0/0:5,0:6:3.01:0,3,52	0/0:23,0:20:11.85:0,12,402	0/0:10,0:12:3.48:0,3,166	0/0:11,0:12:27.09:0,27,1292	1/1:5,8:12:16.52:711,17,0	0/0:9,0:7:12.04:0,12,577
chr10	82601536	.	GAAAA	G	11449.42	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-9.914;DP=526;FS=0.544;HRun=14;HaplotypeScore=98.5674;InbreedingCoeff=0.9148;MQ=77.65;MQ0=5;MQRankSum=-1.381;QD=27.13;ReadPosRankSum=3.449;VQSLOD=4.1184;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,9:15:20.97:297,21,0	1/1:1,2:3:5.14:84,5,0	0/0:34,0:22:24.17:0,24,305	0/0:22,0:18:26.33:0,26,307	1/1:5,17:22:29.71:373,30,0	1/1:1,23:24:60.19:849,60,0	1/1:1,16:17:42.09:589,42,0	1/1:13,28:41:80.98:1086,81,0	1/1:3,14:17:27.07:382,27,0	1/1:9,15:24:42.06:593,42,0	1/1:2,8:9:17.99:255,18,0	1/1:1,13:15:39.10:533,39,0	1/1:2,11:13:21.07:297,21,0	1/1:3,6:9:11.97:170,12,0	1/1:5,19:24:39.03:552,39,0	1/1:0,18:19:37.34:512,37,0	1/1:3,21:24:42.05:571,42,0	1/1:4,11:15:30.05:425,30,0	1/1:2,15:17:44.95:565,45,0	1/1:5,17:23:46.16:616,46,0	1/1:3,8:11:14.05:288,14,0	1/1:1,7:8:12:170,12,0	1/1:3,10:13:27.04:382,27,0	1/1:4,18:22:45.09:630,45,0	1/1:0,8:8:24.08:340,24,0	0/0:8,1:25:7.17:0,7,294	1/1:2,26:28:63.21:891,63,0	0/0:2,0:23:64.58:0,65,429
chr10	82602182	.	TTTTG	T	20837.05	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=6.346;DP=727;FS=0.000;HRun=0;HaplotypeScore=128.3451;InbreedingCoeff=0.9992;MQ=66.34;MQ0=0;MQRankSum=-2.475;QD=32.46;ReadPosRankSum=3.235;VQSLOD=5.0036;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,44:54:99:1851,111,0	1/1:0,15:15:36.08:580,36,0	0/0:22,0:20:48.09:0,48,845	0/0:15,0:15:28.80:0,29,555	1/1:3,29:32:80.78:1053,81,0	1/1:0,15:15:33.11:560,33,0	1/1:5,31:36:69.15:1108,69,0	1/1:11,27:38:81.14:1183,81,0	1/1:6,23:29:54.18:915,54,0	1/1:2,17:19:54.07:776,54,0	1/1:2,13:15:38.91:506,39,0	1/1:5,17:22:45.11:732,45,0	1/1:1,18:19:36.12:610,36,0	1/1:2,15:17:33.11:560,33,0	1/1:5,24:29:63.17:1036,63,0	1/1:6,31:37:59.93:1018,60,0	1/1:5,28:33:66.18:1088,66,0	1/1:5,17:22:33.11:560,33,0	1/1:7,16:23:48.11:668,48,0	1/1:2,26:28:75.17:1197,75,0	1/1:6,27:33:42.10:712,42,0	1/1:2,23:25:56.80:743,57,0	1/1:0,20:20:45.07:700,45,0	1/1:5,34:39:87.24:1444,87,0	1/1:3,11:14:27.05:427,27,0	0/0:35,0:35:99:0,99,2181	1/1:5,23:28:47.95:812,48,0	0/0:13,0:13:39.13:0,39,950
chr10	82602797	.	AG	A	16160.42	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=5.028;DP=637;FS=2.513;HRun=2;HaplotypeScore=69.5581;InbreedingCoeff=0.9943;MQ=76.82;MQ0=0;MQRankSum=-4.078;QD=30.09;ReadPosRankSum=5.620;VQSLOD=4.3707;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:39.08:482,39,0	1/1:1,7:8:17.97:210,18,0	0/0:32,0:28:72.98:0,73,873	0/0:19,0:16:34.23:0,34,425	1/1:0,27:27:74.83:827,75,0	1/1:1,22:23:48.16:619,48,0	1/1:2,21:23:53.76:666,54,0	1/1:0,26:26:77.98:918,78,0	1/1:1,26:27:60.18:759,60,0	1/1:0,36:36:99:1289,108,0	1/1:0,12:12:36.06:445,36,0	1/1:0,14:14:30.10:384,30,0	1/1:0,28:28:78.25:1003,78,0	1/1:1,15:16:17.74:370,18,0	1/1:0,23:23:51.17:655,51,0	1/1:0,19:19:45.15:577,45,0	1/1:1,18:19:30.63:526,31,0	1/1:0,29:29:66.21:852,66,0	1/1:0,29:29:87.19:1032,87,0	1/1:0,23:23:66.02:772,66,0	1/1:3,21:24:52.96:694,53,0	1/1:1,20:21:51.12:639,51,0	1/1:1,15:16:37.20:465,37,0	1/1:0,15:15:45.15:580,45,0	1/1:0,23:23:42.14:543,42,0	0/0:40,1:41:84.59:0,85,1575	1/1:0,32:32:66.21:850,66,0	0/0:8,0:8:24.08:0,24,349
chr10	82603228	.	G	GAAA	10561.95	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=-0.627;DP=480;FS=0.000;HRun=11;HaplotypeScore=73.7860;InbreedingCoeff=0.7364;MQ=56.57;MQ0=3;MQRankSum=-3.126;QD=23.79;ReadPosRankSum=-0.125;VQSLOD=3.3895;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:33:51.11:692,51,0	0/1:1,0:1:0:0,0,0	0/1:5,0:4:19.06:19,0,56	0/0:4,0:4:5.95:0,6,55	1/1:4,10:14:33.03:482,33,0	1/1:6,13:19:33.11:621,33,0	1/1:6,1:16:33.04:432,33,0	1/1:21,2:30:36.95:499,37,0	1/1:5,11:18:19.29:290,19,0	1/1:10,6:15:21.02:310,21,0	1/1:2,3:6:12.04:188,12,0	1/1:2,11:15:18.06:339,18,0	1/1:1,6:9:12.04:189,12,0	1/1:4,16:22:30.10:547,30,0	1/1:6,11:21:39.08:643,39,0	1/1:7,11:18:27.07:459,27,0	1/1:3,19:28:53.92:932,54,0	1/1:10,14:31:36.05:576,36,0	1/1:17,1:25:51:623,51,0	1/1:6,1:15:33.11:493,33,0	1/1:4,9:16:15.02:247,15,0	1/1:3,6:9:15.05:282,15,0	1/1:3,4:9:12:189,12,0	1/1:8,19:31:20.56:751,21,0	1/1:3,7:14:20.10:328,20,0	0/0:21,0:22:44.99:0,45,509	1/1:7,2:18:31.33:431,31,0	0/0:9,0:10:23.98:0,24,263
chr10	82604594	.	TTTTTTTTTGG	T	318.30	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=6.371;DP=324;FS=25.182;HRun=0;HaplotypeScore=112.6673;InbreedingCoeff=0.4290;MQ=50.60;MQ0=28;MQRankSum=3.061;QD=1.84;ReadPosRankSum=-2.941;VQSLOD=-0.0898;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:13:1.97:7,2,0	1/1:3,0:3:2.79:22,3,0	0/0:13,0:8:20.19:0,20,265	0/0:8,0:6:11.91:0,12,185	0/0:10,0:9:0:0,0,1	1/1:9,0:8:5.42:42,5,0	1/1:6,0:6:3.52:26,4,0	0/1:9,0:8:0.04:1,0,0	1/1:8,0:8:5.38:41,5,0	0/0:17,0:16:0:0,0,2	0/0:6,0:6:0:0,0,0	0/0:9,0:9:0:0,0,1	1/1:11,0:10:1.97:20,2,0	1/1:12,0:12:1.88:20,2,0	1/1:14,0:14:1.61:18,2,0	1/1:15,0:15:7.65:61,8,0	0/0:10,0:6:0:0,0,1	1/1:6,0:6:2.61:20,3,0	0/0:13,0:10:5.69:0,6,114	1/1:15,0:15:11.92:86,12,0	1/1:11,0:10:3.15:35,3,0	1/1:7,4:11:2.25:18,2,0	1/1:13,0:11:2.34:20,2,0	0/0:9,0:7:0:0,0,1	1/1:12,0:12:1.84:20,2,0	0/0:22,0:21:60.11:0,60,2157	0/0:13,0:12:0:0,0,1	0/0:21,0:17:44.84:0,45,1597
chr10	82605705	.	G	GA	4382.59	PASS	AB=0.950;AC=14;AF=0.250;AN=56;BaseQRankSum=-10.213;DP=625;FS=0.360;HRun=9;HaplotypeScore=99.4559;InbreedingCoeff=0.8271;MQ=71.77;MQ0=0;MQRankSum=0.719;QD=20.29;ReadPosRankSum=-1.835;VQSLOD=3.9991;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:36:87.24:962,87,0	0/0:18,0:18:47.97:0,48,412	0/0:7,0:7:14.82:0,15,115	0/1:11,0:11:4.95:5,0,73	0/0:23,0:23:59.82:0,60,512	0/0:29,0:29:71.97:0,72,621	1/1:8,29:37:72.19:796,72,0	1/1:4,37:41:88.22:1183,88,0	0/0:21,0:21:53.95:0,54,463	0/0:24,0:24:53.97:0,54,466	0/1:16,2:18:18.37:18,0,317	0/0:28,0:28:77.96:0,78,673	0/0:13,0:13:23.97:0,24,205	0/0:14,0:14:29.97:0,30,256	0/0:24,0:24:53.95:0,54,465	0/0:14,0:13:29.98:0,30,260	0/0:31,0:31:77.93:0,78,669	0/0:14,0:14:26.97:0,27,230	1/1:8,16:24:30.82:493,31,0	1/1:9,11:21:23.96:227,24,0	0/0:32,0:33:85.97:0,86,727	0/0:21,0:21:59.98:0,60,521	0/0:21,0:21:41.75:0,42,454	0/0:26,1:27:35.74:0,36,529	0/0:14,0:14:32.97:0,33,286	0/0:24,0:25:61.98:0,62,521	1/1:3,25:28:63.64:698,64,0	0/0:8,0:8:20.99:0,21,182
chr10	82606231	.	TA	T	3692.69	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=2.092;DP=383;FS=2.191;HRun=2;HaplotypeScore=91.3910;InbreedingCoeff=0.7551;MQ=69.21;MQ0=0;MQRankSum=1.865;QD=11.22;ReadPosRankSum=-2.398;VQSLOD=1.1815;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:23.33:143,23,0	1/1:6,0:6:5.26:79,5,0	0/0:16,0:10:10.34:0,10,185	0/0:9,0:5:13.60:0,14,98	1/1:18,0:18:16.31:187,16,0	1/1:14,1:15:23.89:175,24,0	1/1:5,0:5:5.40:36,5,0	1/1:18,1:19:35.35:250,35,0	1/1:9,1:10:7.25:81,7,0	1/1:11,1:12:26.23:213,26,0	1/1:14,1:15:24.96:195,25,0	1/1:15,0:15:11.42:86,11,0	1/1:8,2:10:5.44:123,5,0	1/1:8,0:9:7.16:136,7,0	1/1:7,1:8:9.46:110,9,0	1/1:10,1:11:9.79:90,10,0	1/1:20,2:22:29.10:227,29,0	1/1:20,3:23:22.13:231,22,0	1/1:15,0:15:30.91:217,31,0	1/1:16,0:16:39.08:249,39,0	1/1:10,0:10:16.27:122,16,0	1/1:4,0:4:2.42:24,2,0	1/1:15,0:15:18.95:139,19,0	1/1:10,0:10:8.05:88,8,0	1/1:18,1:19:31.96:239,32,0	0/0:17,0:17:47.54:0,48,462	1/1:24,0:26:41.69:252,42,0	0/0:12,0:12:32.46:0,32,364
chr10	82606886	.	TG	T	3944.85	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.947;DP=644;FS=4.895;HRun=2;HaplotypeScore=68.3584;InbreedingCoeff=0.9950;MQ=73.62;MQ0=0;MQRankSum=-2.513;QD=37.22;ReadPosRankSum=-2.205;VQSLOD=3.4011;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,144,2156	0/0:9,0:9:27.08:0,27,385	0/0:24,0:24:64.27:0,64,987	0/0:25,0:25:72.24:0,72,1068	0/0:15,0:15:45.15:0,45,671	0/0:19,0:19:57.18:0,57,834	0/0:20,0:19:60.14:0,60,830	1/1:0,39:39:99:1507,117,0	0/0:24,0:24:72.24:0,72,1079	0/0:21,0:21:63.21:0,63,931	0/0:10,0:10:27.08:0,27,385	0/0:21,0:21:60.20:0,60,899	0/0:25,0:25:75.24:0,75,1103	0/0:17,0:17:51.16:0,51,745	0/0:29,0:29:87.28:0,87,1282	0/0:31,0:31:93.32:0,93,1393	0/0:32,0:32:93.32:0,93,1394	0/0:21,0:21:63.21:0,63,944	1/1:0,22:22:66.19:841,66,0	1/1:0,18:18:48.16:623,48,0	0/0:37,0:37:99:0,111,1620	0/0:16,0:16:45.62:0,46,675	0/0:19,0:19:54.17:0,54,788	0/0:27,0:27:81.27:0,81,1212	0/0:17,0:17:48.16:0,48,720	0/0:23,0:23:66.22:0,66,990	1/1:0,27:27:75.24:974,75,0	0/0:5,0:5:15.05:0,15,225
chr10	82607429	.	AC	A	2865.41	PASS	AC=34;AF=0.630;AN=54;BaseQRankSum=-1.438;DP=460;FS=5.616;HRun=9;HaplotypeScore=97.5439;InbreedingCoeff=0.9489;MQ=77.89;MQ0=12;MQRankSum=-2.895;QD=12.04;ReadPosRankSum=4.259;VQSLOD=3.1148;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:9.83:0,10,92	./.	0/0:54,0:24:49.71:0,50,362	0/0:51,0:23:17.98:0,18,188	1/1:15,1:15:24.70:168,25,0	1/1:13,0:12:29.58:196,30,0	0/0:17,0:18:25.37:0,25,211	0/0:23,0:22:14.13:0,14,107	1/1:11,1:12:26.82:197,27,0	1/1:11,1:12:26.46:175,26,0	1/1:11,3:13:25.54:186,26,0	1/1:16,0:16:20.80:182,21,0	1/1:6,1:7:17.81:126,18,0	1/1:9,0:9:17.74:123,18,0	1/1:14,1:15:29.31:187,29,0	1/1:14,0:14:32.62:230,33,0	1/1:22,0:21:34.58:228,35,0	1/1:10,2:12:29.60:203,30,0	0/0:18,0:18:21.42:0,21,146	0/0:8,0:8:3.21:0,3,21	1/1:17,0:16:29.32:189,29,0	1/1:11,1:12:20.83:151,21,0	1/1:19,0:18:36.10:219,36,0	1/1:17,0:16:20.75:144,21,0	1/1:10,1:11:21.59:174,22,0	0/0:7,0:13:14.41:0,14,89	0/0:11,0:11:29.42:0,29,202	0/0:3,0:6:13.58:0,14,71
chr10	82607437	.	CCT	C	5132.44	PASS	AB=0.778;AC=33;AF=0.611;AN=54;BaseQRankSum=-2.295;DP=459;FS=0.923;HRun=0;HaplotypeScore=91.2897;InbreedingCoeff=0.9277;MQ=69.57;MQ0=23;MQRankSum=-1.167;QD=22.12;ReadPosRankSum=4.635;VQSLOD=5.2551;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,1:16:31.40:0,31,225	./.	0/0:62,0:26:47.17:0,47,484	0/0:51,0:18:32.91:0,33,314	1/1:14,3:17:21.09:185,21,0	1/1:4,7:11:30.05:364,30,0	0/0:13,0:13:32.63:0,33,277	0/0:20,0:18:38.74:0,39,279	1/1:7,3:10:27:286,27,0	1/1:13,4:17:24.75:334,25,0	0/1:10,4:13:2.11:174,0,2	1/1:4,9:14:32.29:410,32,0	1/1:2,3:6:15.89:169,16,0	1/1:7,4:10:26.28:218,26,0	1/1:6,5:12:32.85:364,33,0	1/1:8,5:13:38.89:392,39,0	1/1:11,9:18:10.16:407,10,0	1/1:6,6:12:27.89:345,28,0	0/0:18,0:17:41.28:0,41,333	0/0:6,0:5:8.79:0,9,53	1/1:10,7:15:29.66:281,30,0	1/1:7,3:10:20.99:215,21,0	1/1:6,12:17:42.58:460,43,0	1/1:9,4:11:26.78:231,27,0	1/1:11,3:14:27.76:299,28,0	0/0:15,0:15:34.77:0,35,251	0/0:12,0:12:32.84:0,33,299	0/0:11,0:10:14.11:0,14,138
chr10	82607438	.	C	CTTT	2534.21	PASS	AB=0.958;AC=14;AF=0.259;AN=54;BaseQRankSum=-4.845;DP=471;FS=11.303;HRun=12;HaplotypeScore=122.9241;InbreedingCoeff=0.7152;MQ=67.32;MQ0=23;MQRankSum=-3.761;QD=19.05;ReadPosRankSum=-6.643;VQSLOD=-0.6803;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:18,2:22:44.25:601,44,0	./.	0/0:61,0:25:19.66:0,20,199	0/0:48,0:17:4.04:0,4,88	0/0:19,0:18:10.42:0,10,78	0/0:11,0:11:23.69:0,24,155	1/1:14,0:18:30.03:412,30,0	1/1:13,3:19:12.87:537,13,0	0/0:10,0:10:11.74:0,12,75	0/0:16,0:17:29.49:0,29,199	0/0:12,0:12:23.72:0,24,193	0/0:14,0:14:29.46:0,29,190	0/0:6,0:5:14.73:0,15,99	0/0:10,0:9:17.79:0,18,125	0/0:8,0:11:29.54:0,30,189	0/0:12,0:12:23.29:0,23,149	0/0:20,0:18:32.65:0,33,234	0/0:11,0:12:26.77:0,27,196	1/1:12,4:20:45.19:572,45,0	1/1:6,1:7:9.03:122,9,0	0/1:18,0:16:38.08:38,0,66	0/0:9,0:9:8.83:0,9,56	0/0:18,0:17:32.55:0,33,221	0/0:14,0:11:14.81:0,15,101	0/0:14,0:14:17.68:0,18,124	0/0:14,0:14:3.27:0,3,120	1/1:8,2:12:31.79:426,32,0	0/1:10,0:10:9.29:9,0,94
chr10	82607454	.	TC	T	772.23	PASS	AB=0.965;AC=28;AF=0.500;AN=56;BaseQRankSum=0.387;DP=418;FS=4.608;HRun=1;HaplotypeScore=91.2718;InbreedingCoeff=-0.2971;MQ=52.63;MQ0=24;MQRankSum=-2.531;QD=2.35;ReadPosRankSum=5.892;VQSLOD=-0.6036;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:26:30.31:30,0,103	1/1:5,0:5:3.02:8,3,0	0/0:28,3:9:8.98:0,9,81	0/1:32,3:11:14.88:15,0,18	0/1:12,0:11:25.76:35,0,26	0/1:12,0:11:21.06:32,0,21	0/1:11,1:12:18.54:38,0,19	0/1:20,2:19:24.46:67,0,24	0/1:7,0:7:2.10:2,0,32	0/1:17,0:16:26.77:64,0,27	0/1:15,0:13:8.61:9,0,45	0/1:14,1:15:23.76:105,0,24	1/1:7,0:6:12.36:50,12,0	1/1:10,1:10:10.36:92,10,0	1/1:13,0:13:8.04:65,8,0	0/1:11,1:12:14.71:71,0,15	0/1:18,1:16:63.90:67,0,64	0/0:11,1:12:1.37:0,1,125	0/0:18,0:17:7.36:0,7,175	1/1:7,0:6:9.73:35,10,0	0/1:17,0:15:10.97:11,0,55	0/1:8,0:8:10.71:11,0,23	0/1:17,1:17:32.14:32,0,98	0/1:13,1:11:1.79:37,0,2	0/1:10,0:10:5.86:36,0,6	0/0:13,0:13:32.21:0,32,394	0/1:10,1:11:19.76:20,0,33	0/0:15,0:14:6.36:0,6,354
chr10	82607455	.	CT	C	3620.37	PASS	AB=0.667;AC=44;AF=0.786;AN=56;BaseQRankSum=0.229;DP=413;FS=2.773;HRun=9;HaplotypeScore=83.0801;InbreedingCoeff=0.6496;MQ=52.92;MQ0=23;MQRankSum=-3.384;QD=11.57;ReadPosRankSum=3.028;VQSLOD=3.2005;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,15:25:0.91:143,1,0	1/1:0,5:5:9:82,9,0	0/0:30,0:9:8.98:0,9,61	0/0:34,0:11:6.16:0,6,34	1/1:3,9:11:14.50:136,14,0	1/1:3,9:11:18:162,18,0	0/1:6,5:11:1.28:119,0,1	1/1:9,13:19:26.65:317,27,0	0/0:4,3:7:0:0,0,0	1/1:6,11:16:13.22:279,13,0	1/1:5,10:13:11.79:99,12,0	1/1:6,9:15:20.98:191,21,0	1/1:3,4:6:8.97:82,9,0	1/1:4,7:10:17.99:161,18,0	1/1:1,12:13:30:274,30,0	1/1:5,7:12:14.92:134,15,0	1/1:10,9:16:15.84:225,16,0	1/1:10,1:12:8.01:60,8,0	1/1:11,7:17:17.99:165,18,0	1/1:2,5:6:12.01:109,12,0	1/1:8,9:15:17.12:159,17,0	1/1:2,6:8:6:55,6,0	1/1:6,12:17:24:219,24,0	1/1:2,11:10:15.01:137,15,0	1/1:2,8:10:21:192,21,0	0/0:13,0:13:27.08:0,27,312	0/1:5,6:11:0.56:119,0,1	0/0:16,0:15:38.63:0,39,370
chr10	82607464	.	T	TC	285.36	PASS	AB=0.902;AC=14;AF=0.250;AN=56;BaseQRankSum=-1.706;DP=325;FS=5.451;HRun=0;HaplotypeScore=70.7715;InbreedingCoeff=0.6406;MQ=48.27;MQ0=18;MQRankSum=-2.870;QD=2.91;ReadPosRankSum=-1.079;VQSLOD=1.6291;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,1:16:16.63:87,17,0	0/0:5,0:5:8.71:0,9,49	0/0:16,0:5:4.76:0,5,24	0/0:18,0:4:0.84:0,1,12	0/0:11,0:11:20.48:0,20,127	0/0:11,0:11:20.25:0,20,116	1/1:8,0:8:12.18:42,12,0	1/1:21,0:18:33.77:136,34,0	0/0:5,0:5:5.90:0,6,41	0/0:15,0:14:34.93:0,35,206	0/0:12,0:11:14.67:0,15,95	0/0:11,0:11:23.32:0,23,140	0/0:4,0:3:8.71:0,9,48	0/0:11,0:10:23.39:0,23,150	0/0:14,0:14:35.02:0,35,210	0/0:10,0:10:20.56:0,21,134	0/1:12,2:11:21.68:22,0,82	0/0:4,0:4:11.67:0,12,68	1/1:11,0:10:22.29:107,22,0	1/1:5,0:5:0.62:8,1,0	0/0:16,0:13:26.35:0,26,162	0/0:8,0:8:11.81:0,12,85	0/0:15,0:14:29.06:0,29,169	0/0:14,1:12:13.10:0,13,78	0/0:9,0:9:23.32:0,23,141	0/0:12,0:12:33.09:0,33,427	1/1:8,0:8:9.92:48,10,0	0/1:12,1:12:9.41:9,0,364
chr10	82607750	.	GGGT	G	2644.22	PASS	AB=1.000;AC=40;AF=0.741;AN=54;BaseQRankSum=2.776;DP=459;FS=15.131;HRun=0;HaplotypeScore=86.2969;InbreedingCoeff=0.5617;MQ=81.47;MQ0=1;MQRankSum=-4.710;QD=7.28;ReadPosRankSum=3.712;VQSLOD=0.7613;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:31.27:31,0,35	1/1:2,0:2:0.47:1,0,0	0/0:23,0:23:63.20:0,63,1111	0/0:22,0:20:41.74:0,42,744	1/1:15,1:16:22.49:139,22,0	1/1:17,0:17:25.21:116,25,0	0/1:23,0:23:16.14:16,0,111	0/1:10,0:10:13.48:36,0,13	1/1:21,0:21:25.18:114,25,0	1/1:15,2:16:40.06:285,40,0	1/1:12,0:12:17.43:84,17,0	1/1:13,0:13:19.63:90,20,0	1/1:9,1:10:11.21:90,11,0	1/1:13,0:13:20.47:91,20,0	1/1:22,0:22:36.27:172,36,0	1/1:16,3:19:34.42:305,34,0	1/1:27,1:28:53.44:287,53,0	1/1:20,3:23:46.38:282,46,0	0/1:7,0:7:18.89:19,0,38	./.	1/1:30,1:31:45.15:249,45,0	1/1:11,0:11:13.94:63,14,0	1/1:10,0:9:5.54:25,6,0	1/1:25,1:24:47.67:253,48,0	1/1:13,0:12:16.72:77,17,0	0/0:22,0:22:66.20:0,66,1299	0/0:16,0:16:8.40:0,8,44	0/0:8,0:8:24.08:0,24,512
chr10	82607751	.	GGT	G	7723.02	PASS	AB=1.000;AC=44;AF=0.815;AN=54;BaseQRankSum=1.564;DP=450;FS=11.192;HRun=0;HaplotypeScore=61.6129;InbreedingCoeff=0.7441;MQ=81.94;MQ0=1;MQRankSum=-4.246;QD=20.87;ReadPosRankSum=2.788;VQSLOD=4.3206;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:15.89:83,16,0	1/1:0,2:2:2.98:21,3,0	0/0:23,0:23:63:0,63,861	0/0:22,0:20:35.16:0,35,545	1/1:3,13:16:24.07:345,24,0	1/1:1,14:15:27.09:412,27,0	1/1:23,0:23:5.06:62,5,0	1/1:8,0:8:9.61:71,10,0	1/1:1,20:21:27.09:413,27,0	1/1:3,14:16:42.05:531,42,0	1/1:1,11:12:18.02:249,18,0	1/1:2,11:13:21.07:320,21,0	1/1:1,9:10:14.90:188,15,0	1/1:1,12:13:21.96:323,22,0	1/1:2,20:22:44.72:650,45,0	1/1:5,14:19:36.07:469,36,0	1/1:4,24:28:57.15:825,57,0	1/1:3,19:22:49.69:696,50,0	0/1:6,0:6:6.10:24,0,6	./.	1/1:4,27:31:48.11:687,48,0	1/1:0,11:11:15.05:229,15,0	1/1:3,6:8:6.02:91,6,0	1/1:1,24:24:51.16:758,51,0	1/1:3,9:11:18.06:274,18,0	0/0:22,0:22:66.20:0,66,1065	0/1:18,0:18:0.90:1,0,2	0/0:8,0:8:24.08:0,24,414
chr10	82607752	.	GT	G	4288.90	PASS	AC=46;AF=0.852;AN=54;BaseQRankSum=6.507;DP=442;FS=10.701;HRun=1;HaplotypeScore=67.7962;InbreedingCoeff=0.8234;MQ=82.32;MQ0=1;MQRankSum=-5.109;QD=11.88;ReadPosRankSum=1.167;VQSLOD=2.1384;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:24.02:155,24,0	1/1:2,0:2:2.98:21,3,0	0/0:23,0:23:41.74:0,42,582	0/0:22,0:20:3.32:0,3,318	1/1:14,2:16:23.33:166,23,0	1/1:14,0:14:26.80:193,27,0	1/1:22,0:22:37.64:219,38,0	1/1:7,0:7:14.59:99,15,0	1/1:20,1:21:26.78:191,27,0	1/1:16,1:16:41.69:305,42,0	1/1:11,1:12:18.34:129,18,0	1/1:11,1:12:20.83:149,21,0	1/1:10,0:10:14.58:108,15,0	1/1:12,1:13:21.72:150,22,0	1/1:20,2:22:44.69:343,45,0	1/1:17,2:19:35.63:247,36,0	1/1:25,2:27:56.52:401,57,0	1/1:22,0:22:49.39:340,49,0	1/1:5,0:5:8.13:58,8,0	./.	1/1:28,3:31:47.59:337,48,0	1/1:11,0:11:14.88:106,15,0	1/1:6,1:6:5.95:42,6,0	1/1:25,0:23:50.58:359,51,0	1/1:9,2:10:17.86:127,18,0	0/0:22,0:22:66.19:0,66,855	1/1:18,0:18:8.07:41,8,0	0/0:8,0:8:24.08:0,24,326
chr10	82607759	.	G	GGT	1020.15	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=-4.708;DP=467;FS=1.418;HRun=0;HaplotypeScore=94.2005;InbreedingCoeff=0.9224;MQ=76.65;MQ0=1;MQRankSum=-1.407;QD=11.86;ReadPosRankSum=-3.501;VQSLOD=2.7973;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,3:20:15.05:232,15,0	./.	0/0:25,0:25:53.21:0,53,731	0/0:22,0:20:47.68:0,48,547	0/0:16,0:16:29.74:0,30,294	0/0:14,0:13:29.43:0,29,293	1/1:10,10:21:32.94:440,33,0	1/1:2,0:9:21.01:213,21,0	0/0:23,0:23:36.07:0,36,374	0/0:16,0:15:38.81:0,39,395	0/0:13,0:13:21.06:0,21,194	0/0:16,0:16:24.05:0,24,251	0/0:10,0:10:14.87:0,15,145	0/0:13,0:13:20.59:0,21,236	0/0:26,0:26:59.99:0,60,604	0/0:21,0:22:42.09:0,42,442	0/0:28,0:28:62.63:0,63,651	0/0:20,0:20:51.08:0,51,556	1/1:2,1:8:20.44:169,20,0	1/1:3,0:7:2.93:18,3,0	0/0:26,0:26:45.13:0,45,502	0/0:10,0:10:15.03:0,15,158	0/0:7,0:6:9:0,9,83	0/0:27,0:25:60.10:0,60,631	0/0:16,0:15:32.98:0,33,299	0/0:20,0:20:57.14:0,57,792	1/1:3,2:20:8.30:121,8,0	0/0:9,0:9:27.08:0,27,369
chr10	82607944	.	T	TATAG	6229.68	PASS	AB=0.846;AC=32;AF=0.667;AN=48;BaseQRankSum=-5.505;DP=660;FS=0.566;HRun=0;HaplotypeScore=143.9544;InbreedingCoeff=0.7665;MQ=60.01;MQ0=11;MQRankSum=-0.860;QD=15.54;ReadPosRankSum=0.753;VQSLOD=4.3321;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:57.08:0,57,828	1/1:7,3:10:12.04:252,12,0	./.	./.	1/1:23,5:28:27.09:572,27,0	1/1:22,0:21:23.90:247,24,0	1/1:20,2:21:21.06:409,21,0	0/1:31,0:30:0:0,0,0	0/0:30,0:30:36.12:0,36,545	1/1:25,9:32:30.39:647,30,0	1/1:12,10:20:27.09:623,27,0	./.	0/0:21,0:21:39.13:0,39,590	0/0:15,0:15:21.07:0,21,318	1/1:15,8:23:15.05:345,15,0	1/1:19,9:28:30.10:690,30,0	0/0:21,0:19:20.66:0,21,305	1/1:14,8:22:21.07:485,21,0	1/1:30,0:30:26.99:323,27,0	1/1:17,0:16:3.01:50,3,0	1/1:15,6:20:21.07:486,21,0	1/1:11,7:18:15.05:347,15,0	1/1:23,1:22:3.01:69,3,0	./.	0/1:15,12:27:11.99:661,0,12	0/0:15,0:28:30.03:0,30,279	1/1:22,0:22:2.98:22,3,0	0/0:3,0:10:9:0,9,79
chr10	82607997	.	ATAAT	A	4538.22	PASS	AB=0.925;AC=26;AF=0.464;AN=56;BaseQRankSum=3.478;DP=722;FS=21.093;HRun=0;HaplotypeScore=183.8971;InbreedingCoeff=-0.4352;MQ=45.50;MQ0=25;MQRankSum=-0.099;QD=7.80;ReadPosRankSum=-4.146;VQSLOD=1.9728;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:44:99:372,0,1193	0/1:9,0:9:63.11:77,0,63	0/0:23,0:3:8.98:0,9,121	0/0:33,0:8:24.08:0,24,349	0/1:27,0:24:95.86:324,0,96	1/1:26,0:25:38.51:424,39,0	0/1:27,0:26:99:275,0,163	0/0:41,0:38:31.92:0,32,740	0/1:28,0:28:99:321,0,813	0/1:30,0:26:99:131,0,642	0/1:22,0:17:99:114,0,220	0/1:3,22:25:26.79:36,0,27	0/1:13,11:24:7.13:7,0,907	0/1:25,0:25:99:401,0,479	0/1:23,0:23:78.97:392,0,79	0/1:30,0:30:99:469,0,164	0/1:23,0:21:99:268,0,423	0/1:16,0:16:91.02:91,0,164	0/1:30,0:29:99:230,0,463	1/1:18,0:16:12.01:109,12,0	0/1:13,22:33:13.70:14,0,173	0/1:11,0:11:77.43:77,0,93	0/1:14,15:24:5.28:28,0,5	1/1:9,21:29:5.38:91,5,0	0/1:22,0:22:99:170,0,301	0/0:29,0:29:69.57:0,70,949	0/1:28,0:28:45.77:115,0,46	0/0:14,0:13:19.79:0,20,243
chr10	82607998	.	TAATTAGAC	T	2504.50	PASS	AB=0.982;AC=24;AF=0.429;AN=56;BaseQRankSum=6.778;DP=718;FS=15.176;HRun=0;HaplotypeScore=221.3526;InbreedingCoeff=-0.3247;MQ=45.46;MQ0=25;MQRankSum=2.062;QD=4.81;ReadPosRankSum=-2.119;VQSLOD=1.2501;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:44:99:132,0,1201	0/1:10,0:10:60.85:61,0,63	0/0:23,0:3:8.98:0,9,121	0/0:33,0:8:24.07:0,24,339	0/1:27,0:24:94.77:192,0,95	1/1:25,0:24:38.31:298,38,0	0/1:27,0:26:99:114,0,175	0/0:39,0:37:46.44:0,46,395	0/1:27,0:27:99:138,0,818	0/1:29,0:25:26.58:27,0,643	0/1:22,0:17:40.51:41,0,219	0/1:25,0:25:12.31:12,0,21	0/0:24,0:24:16.84:0,17,924	0/1:25,0:25:99:165,0,492	0/1:23,0:23:79.28:184,0,79	0/1:29,0:29:99:224,0,167	0/1:24,0:22:99:162,0,423	0/1:15,0:15:41.42:41,0,147	0/1:16,14:29:99:378,0,377	1/1:18,0:16:12.03:164,12,0	0/0:35,0:33:10.98:0,11,195	0/1:11,0:11:38.64:39,0,93	0/1:29,0:24:5.68:11,0,6	1/1:30,0:29:5.45:44,5,0	0/1:21,0:21:59.64:60,0,302	0/0:29,0:29:69.57:0,70,1378	0/1:30,0:30:45.71:188,0,46	0/0:14,0:13:24.08:0,24,501
chr10	82608001	.	T	TTAGA	8284.90	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=4.568;DP=716;FS=2.806;HRun=0;HaplotypeScore=178.1817;InbreedingCoeff=0.8528;MQ=45.23;MQ0=25;MQRankSum=-0.426;QD=13.34;ReadPosRankSum=-3.149;VQSLOD=3.6884;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:44,0:44:45.20:318,45,0	1/1:3,6:9:11.84:138,12,0	0/0:23,0:3:8.94:0,9,67	0/0:33,0:8:10.33:0,10,147	1/1:29,0:24:26.95:344,27,0	1/1:25,1:25:32.72:366,33,0	1/1:27,0:26:26.02:180,26,0	1/1:38,0:36:92.16:628,92,0	1/1:27,0:27:47.75:426,48,0	1/1:27,0:24:62.37:572,62,0	1/1:23,0:18:26.90:259,27,0	1/1:27,0:27:5.65:62,6,0	1/1:25,0:25:41.87:336,42,0	1/1:25,0:25:51.06:683,51,0	1/1:24,0:24:42.34:461,42,0	1/1:27,0:27:57.81:605,58,0	1/1:23,1:22:22.30:288,22,0	1/1:16,0:16:30.20:266,30,0	1/1:27,0:27:65.19:812,65,0	1/1:6,13:17:18.38:322,18,0	1/1:36,0:34:20.93:185,21,0	1/1:10,0:10:13.82:133,14,0	1/1:28,0:23:3.48:33,3,0	1/1:30,0:29:6.01:73,6,0	1/1:22,0:22:42.26:425,42,0	0/0:28,0:28:83.65:0,84,1057	1/1:2,29:31:18.02:368,18,0	0/0:11,0:10:24.08:0,24,419
chr10	82608401	.	T	TA	2223.94	PASS	AB=0.900;AC=13;AF=0.232;AN=56;BaseQRankSum=-6.812;DP=509;FS=4.315;HRun=9;HaplotypeScore=54.8092;InbreedingCoeff=0.7935;MQ=61.01;MQ0=17;MQRankSum=-1.705;QD=16.00;ReadPosRankSum=-2.330;VQSLOD=3.2308;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,19:24:20.21:559,20,0	0/0:7,0:7:14.99:0,15,130	0/0:25,0:10:14.68:0,15,99	0/0:26,0:12:28.29:0,28,163	0/0:33,0:33:74.98:0,75,651	0/0:12,1:13:2.81:0,3,253	1/1:1,3:3:3.01:33,3,0	1/1:12,30:30:69.13:742,69,0	0/0:16,0:16:44.94:0,45,381	0/0:22,0:19:47.97:0,48,411	0/0:19,0:17:47.97:0,48,412	0/0:13,0:13:29.99:0,30,260	0/0:25,0:25:59.99:0,60,521	0/0:14,0:14:32.97:0,33,281	0/0:16,0:15:35.98:0,36,312	0/0:20,0:20:50.73:0,51,429	0/0:30,0:29:74.98:0,75,651	0/0:26,0:26:74.98:0,75,650	1/1:8,12:16:11.35:296,11,0	1/1:0,9:9:18.05:198,18,0	0/1:8,1:8:12.18:12,0,135	0/0:3,0:3:6:0,6,52	0/0:8,0:7:18:0,18,156	0/0:6,0:6:15:0,15,130	0/0:14,0:14:38.97:0,39,333	0/0:29,0:29:39.10:0,39,520	1/1:8,21:28:51.14:562,51,0	0/0:5,0:5:12:0,12,104
chr10	82608709	.	TA	T	1576.28	PASS	AB=0.563;AC=41;AF=0.820;AN=50;BaseQRankSum=0.260;DP=155;FS=2.527;HRun=11;HaplotypeScore=28.7769;InbreedingCoeff=0.5318;MQ=81.83;MQ0=3;MQRankSum=-3.803;QD=12.61;ReadPosRankSum=2.035;VQSLOD=2.4511;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:7:12.22:36,12,0	1/1:1,3:4:8.99:74,9,0	0/0:9,0:7:15.09:0,15,65	0/0:9,0:6:5.56:0,6,43	0/1:2,7:9:11.05:119,0,11	1/1:0,8:8:20.98:172,21,0	1/1:2,0:3:2.04:6,2,0	1/1:2,0:9:14.25:42,14,0	1/1:0,2:2:2.99:25,3,0	1/1:0,4:3:8.97:71,9,0	./.	1/1:0,4:4:11.91:91,12,0	1/1:1,1:1:3:25,3,0	1/1:0,1:1:3:25,3,0	1/1:2,1:3:3:25,3,0	1/1:0,3:3:8.99:74,9,0	1/1:1,14:15:35.96:295,36,0	1/1:4,17:21:43.20:347,43,0	1/1:2,0:3:6.11:18,6,0	1/1:1,0:4:6.11:18,6,0	1/1:0,3:2:5.99:49,6,0	./.	./.	1/1:0,3:3:5.99:49,6,0	1/1:1,5:6:14.98:123,15,0	0/0:8,0:8:20.92:0,21,207	1/1:2,0:8:14.26:42,14,0	0/0:4,0:4:12.03:0,12,128
chr10	82608964	.	TC	T	1280.31	PASS	AC=32;AF=0.889;AN=36;BaseQRankSum=0.307;DP=97;FS=0.000;HRun=2;HaplotypeScore=13.6748;InbreedingCoeff=0.4268;MQ=33.06;MQ0=18;MQRankSum=-0.307;QD=16.63;ReadPosRankSum=-2.236;VQSLOD=2.6840;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:2,5:7:8.98:96,9,0	1/1:2,0:2:3:27,3,0	./.	./.	1/1:2,1:3:5.98:55,6,0	1/1:3,2:4:12:135,12,0	1/1:2,1:3:5.93:40,6,0	1/1:0,1:1:3.01:39,3,0	1/1:2,1:3:6.02:76,6,0	./.	1/1:2,3:5:12:136,12,0	1/1:4,3:7:12:136,12,0	1/1:13,1:13:30.01:316,30,0	1/1:9,1:6:11.95:92,12,0	./.	./.	1/1:2,3:3:5.98:58,6,0	1/1:0,1:1:3.01:39,3,0	1/1:3,0:2:5.93:40,6,0	1/1:4,1:4:6.01:65,6,0	1/1:1,2:2:3.01:39,3,0	0/0:4,0:3:9.02:0,9,114	./.	0/0:3,0:3:9.03:0,9,126
chr10	82609481	.	T	TA	9306.20	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-15.274;DP=602;FS=13.420;HRun=10;HaplotypeScore=74.8573;InbreedingCoeff=0.9595;MQ=84.49;MQ0=1;MQRankSum=2.022;QD=23.68;ReadPosRankSum=1.907;VQSLOD=4.6368;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:19:28.51:0,29,82	1/1:0,7:7:18.05:192,18,0	0/0:42,0:37:17.25:0,17,330	0/0:22,0:21:3:0,3,122	1/1:5,22:27:63.09:657,63,0	1/1:3,23:26:60.15:640,60,0	0/0:1,0:14:26.48:0,26,77	0/0:4,0:21:33.12:0,33,96	1/1:2,32:34:87.20:920,87,0	1/1:6,22:28:25.83:658,26,0	1/1:2,25:28:78.02:801,78,0	1/1:4,20:25:10.90:524,11,0	1/1:3,14:17:30.08:320,30,0	1/1:3,12:15:33.08:350,33,0	1/1:3,23:26:63.16:671,63,0	1/1:2,23:26:59.98:622,60,0	1/1:2,18:20:45.11:480,45,0	1/1:1,17:18:36.09:384,36,0	0/0:1,0:9:16.29:0,16,47	0/0:1,0:17:31.02:0,31,89	1/1:2,8:10:21.05:224,21,0	1/1:2,20:22:54.10:563,54,0	1/1:4,13:17:26.86:288,27,0	1/1:4,20:25:44.95:462,45,0	1/1:2,20:22:32.50:551,32,0	0/0:32,0:33:79.92:0,80,646	0/0:2,0:21:32.22:0,32,94	0/0:8,0:8:14.97:0,15,123
chr10	82610765	.	AT	A	11905.29	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-5.192;DP=569;FS=0.651;HRun=1;HaplotypeScore=67.3040;InbreedingCoeff=0.9993;MQ=92.40;MQ0=0;MQRankSum=-3.555;QD=36.97;ReadPosRankSum=7.097;VQSLOD=4.5373;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1770	1/1:0,12:12:30.10:419,30,0	0/0:28,0:28:63.35:0,63,1206	0/0:27,0:26:72.19:0,72,1093	1/1:0,24:24:63.17:859,63,0	1/1:0,16:16:36.12:503,36,0	0/0:19,0:19:57.17:0,57,886	0/0:27,0:27:81.25:0,81,1250	1/1:0,14:14:36.12:502,36,0	1/1:1,21:22:63.16:843,63,0	1/1:0,14:14:42.10:565,42,0	1/1:0,26:26:66.22:923,66,0	1/1:0,16:16:48.16:671,48,0	1/1:0,13:13:27.09:378,27,0	1/1:0,18:18:51.17:713,51,0	1/1:0,24:24:69.23:965,69,0	1/1:0,25:25:72.24:1007,72,0	1/1:0,8:8:24.08:335,24,0	0/0:18,0:18:54.17:0,54,822	0/0:19,0:19:57.19:0,57,905	1/1:0,21:21:60.20:837,60,0	1/1:0,17:17:48.16:670,48,0	1/1:0,10:10:27.09:377,27,0	1/1:3,20:23:51.17:713,51,0	1/1:0,19:19:48.06:625,48,0	0/0:23,0:23:69.24:0,69,1103	0/0:33,0:33:96.31:0,96,1492	0/0:14,0:14:42.07:0,42,570
chr10	82610928	.	GTC	G	25085.54	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=5.189;DP=772;FS=0.384;HRun=0;HaplotypeScore=116.3817;InbreedingCoeff=0.9996;MQ=84.35;MQ0=3;MQRankSum=-8.710;QD=38.47;ReadPosRankSum=5.019;VQSLOD=6.5964;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,45:45:99:1762,123,0	1/1:0,15:15:45.15:645,45,0	0/0:33,0:33:35.12:0,35,1452	0/0:43,0:41:98.91:0,99,1651	1/1:1,25:26:72.24:1032,72,0	1/1:0,28:28:78.26:1118,78,0	1/1:0,29:29:75.25:1074,75,0	1/1:3,29:32:84.28:1203,84,0	1/1:1,22:23:66.22:945,66,0	1/1:1,22:22:60.20:857,60,0	1/1:2,20:22:60.12:834,60,0	1/1:3,34:37:99:1417,99,0	1/1:2,26:28:75.72:1065,76,0	1/1:1,23:24:66.22:946,66,0	1/1:1,31:32:87.19:1247,87,0	1/1:2,32:34:84.28:1204,84,0	1/1:1,31:32:84.28:1203,84,0	1/1:2,19:21:54.18:769,54,0	1/1:0,18:17:51.16:704,51,0	1/1:0,24:24:69.23:989,69,0	1/1:4,40:43:99:1530,109,0	1/1:1,14:15:38.89:504,39,0	1/1:0,9:9:27.09:387,27,0	1/1:1,41:42:99:1633,114,0	1/1:0,23:23:66.22:945,66,0	0/0:32,1:33:53.31:0,53,1608	1/1:0,26:26:75.25:1075,75,0	0/0:11,0:11:33.11:0,33,605
chr10	82611928	.	CTT	C	19970.27	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=14.956;DP=748;FS=17.019;HRun=2;HaplotypeScore=93.2139;InbreedingCoeff=0.9840;MQ=92.58;MQ0=6;MQRankSum=-6.551;QD=43.13;ReadPosRankSum=9.615;VQSLOD=2.9197;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,2308	1/1:0,11:10:24.04:362,24,0	0/0:42,0:42:99:0,126,2350	0/0:21,0:21:60.21:0,60,1159	1/1:1,25:26:66.23:1074,66,0	1/1:0,23:22:63.22:1027,63,0	0/0:36,0:36:99:0,108,2129	0/0:29,0:29:87.29:0,87,1716	1/1:0,35:34:87.30:1419,87,0	1/1:0,30:30:90.31:1468,90,0	1/1:0,17:17:45.15:734,45,0	1/1:0,30:30:81.28:1321,81,0	1/1:0,29:29:78.27:1263,78,0	1/1:0,26:26:66.23:1077,66,0	1/1:0,51:51:99:2104,129,0	1/1:0,36:35:93.32:1517,93,0	1/1:0,25:25:69.24:1126,69,0	1/1:0,14:14:39.13:636,39,0	0/0:23,0:23:66.21:0,66,1269	0/0:30,0:30:90.31:0,90,1828	1/1:0,34:34:99:1612,99,0	1/1:0,21:20:51.17:832,51,0	1/1:0,13:13:33.11:537,33,0	1/1:0,26:26:69.24:1126,69,0	1/1:0,16:15:45.15:734,45,0	0/0:29,1:30:41.38:0,41,1720	0/0:33,0:33:99:0,99,1962	0/0:2,0:2:6.02:0,6,122
chr10	82612533	.	TTCCCTCCC	T	3152.90	PASS	AB=0.967;AC=23;AF=0.460;AN=50;BaseQRankSum=-8.500;DP=321;FS=0.629;HRun=0;HaplotypeScore=94.6428;InbreedingCoeff=-0.0212;MQ=55.65;MQ0=9;MQRankSum=6.393;QD=13.25;ReadPosRankSum=7.940;VQSLOD=0.9993;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:13:6.02:0,6,211	0/0:6,0:6:9.03:0,9,110	./.	./.	1/1:4,8:12:12.92:153,13,0	0/1:18,0:18:99:252,0,293	./.	0/0:15,0:14:6.01:0,6,84	0/1:16,0:16:56.68:265,0,57	0/1:26,0:26:99:563,0,240	1/1:4,9:13:15.05:181,15,0	0/1:19,0:19:99:128,0,147	1/1:13,0:13:6.72:188,7,0	1/1:19,0:19:7.46:277,7,0	0/1:15,0:15:99:250,0,119	0/1:18,0:18:99:148,0,305	0/1:5,0:5:8.75:33,0,9	1/1:6,0:6:9.01:124,9,0	0/0:3,0:3:3:0,3,26	0/0:2,0:2:2.98:0,3,21	0/1:15,0:14:47.94:236,0,48	0/1:16,0:16:99:180,0,160	0/1:3,4:7:0.22:0,0,0	1/1:9,0:8:12.04:172,12,0	0/1:11,0:11:99:158,0,139	0/0:8,0:6:9.03:0,9,209	0/0:4,0:4:3.01:0,3,124	0/0:9,0:9:3.01:0,3,115
chr10	82612971	.	GGTGTGTGT	G	1352.98	PASS	AB=0.810;AC=9;AF=0.161;AN=56;BaseQRankSum=-0.231;DP=663;FS=12.903;HRun=0;HaplotypeScore=177.8962;InbreedingCoeff=0.7055;MQ=55.03;MQ0=32;MQRankSum=-3.058;QD=12.89;ReadPosRankSum=-3.802;VQSLOD=1.1963;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:0:0,0,0	0/0:7,0:7:18.06:0,18,521	0/0:58,0:22:19.09:0,19,235	0/0:52,0:24:21.80:0,22,407	0/0:23,0:22:13.92:0,14,385	0/0:28,0:27:20.22:0,20,588	1/1:16,0:17:3.48:59,3,0	1/1:19,12:30:18.11:726,18,0	0/0:31,0:30:33.54:0,34,936	0/0:23,0:23:45.10:0,45,1185	0/0:9,0:7:7.82:0,8,72	0/0:31,0:31:25.57:0,26,495	0/0:12,0:12:12.03:0,12,174	0/0:25,0:23:15.89:0,16,391	0/0:29,0:26:11.95:0,12,251	0/0:22,0:21:32.56:0,33,746	0/0:17,0:16:14.99:0,15,255	0/0:11,0:10:6.91:0,7,127	0/1:13,3:16:3.93:304,0,4	1/1:6,10:16:3.01:70,3,0	0/0:16,0:16:15.05:0,15,421	0/0:31,0:28:21.07:0,21,667	0/0:20,0:19:14.81:0,15,462	0/0:22,0:20:12.04:0,12,321	0/0:12,0:12:15.04:0,15,320	0/0:31,0:29:57.12:0,57,1056	1/1:23,0:22:18.05:338,18,0	0/0:9,0:9:15.05:0,15,310
chr10	82612987	.	TGTGTGTGTGTGAGA	T	1215.71	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=1.488;DP=627;FS=9.068;HRun=0;HaplotypeScore=179.0710;InbreedingCoeff=0.2759;MQ=39.93;MQ0=51;MQRankSum=-3.870;QD=9.07;ReadPosRankSum=0.800;VQSLOD=1.6111;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:3:0,3,25	0/0:9,0:7:18.06:0,18,698	0/0:42,0:9:21.32:0,21,385	0/0:39,0:12:25.39:0,25,555	0/0:22,0:19:17.31:0,17,532	0/0:27,0:26:20.04:0,20,730	0/1:17,0:13:18.48:51,0,18	0/1:31,0:27:99:433,0,199	0/0:34,0:28:36.58:0,37,1246	0/0:19,0:20:50.81:0,51,1604	0/0:7,0:4:9.03:0,9,148	0/0:32,0:29:29.29:0,29,777	0/0:14,0:12:18.03:0,18,329	0/0:24,0:23:18.93:0,19,537	0/1:34,0:29:5.86:6,0,357	0/0:22,0:19:35.45:0,35,1118	0/0:19,0:15:1.07:0,1,497	0/0:12,0:10:14.98:0,15,320	0/1:15,0:14:90.90:242,0,91	1/1:12,0:12:3.01:52,3,0	0/0:17,0:16:18.04:0,18,563	0/0:29,0:25:21.07:0,21,842	0/0:21,0:17:17.49:0,17,620	0/0:28,0:22:12.04:0,12,417	0/0:11,0:10:18.05:0,18,477	0/0:26,0:23:69.23:0,69,1918	1/1:8,16:23:17.63:564,18,0	0/0:6,0:6:15.05:0,15,450
chr10	82612989	.	TGTGTGTGTGAGAGAGA	T	1692.71	PASS	AB=0.776;AC=12;AF=0.214;AN=56;BaseQRankSum=-1.038;DP=618;FS=23.073;HRun=0;HaplotypeScore=185.6957;InbreedingCoeff=0.6319;MQ=39.44;MQ0=51;MQRankSum=-4.459;QD=12.01;ReadPosRankSum=-0.119;VQSLOD=1.2797;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:6,26:30:0:0,0,0	0/0:9,0:7:18.06:0,18,580	0/0:36,0:6:14.84:0,15,205	0/0:37,0:11:20.55:0,21,405	0/0:22,0:19:14.63:0,15,399	0/0:26,0:25:20.73:0,21,599	1/1:11,0:15:3.68:109,4,0	1/1:32,0:28:3.25:773,3,0	0/0:33,0:27:33.54:0,34,993	0/0:20,0:20:17.43:0,17,1160	0/1:7,0:4:10.18:10,0,58	0/0:33,0:30:32.07:0,32,665	0/0:14,0:12:12.03:0,12,218	0/0:23,0:22:15.29:0,15,440	0/0:34,0:29:2.74:0,3,297	0/0:23,0:20:33.21:0,33,936	0/0:19,0:15:12.31:0,12,523	0/0:12,0:10:12.04:0,12,250	1/1:14,0:13:4.17:509,4,0	1/1:13,0:13:3.01:70,3,0	0/0:16,0:15:14.95:0,15,421	0/0:28,0:24:21.07:0,21,693	0/0:21,0:17:14.67:0,15,484	0/0:27,0:21:12.04:0,12,328	0/0:11,0:10:15.04:0,15,337	0/0:27,0:24:66.15:0,66,1426	1/1:24,0:22:17.99:365,18,0	0/0:6,0:5:15.05:0,15,332
chr10	82612997	.	TGAGAGAGA	T	769.68	PASS	AB=0.955;AC=20;AF=0.476;AN=42;BaseQRankSum=1.235;DP=545;FS=26.517;HRun=0;HaplotypeScore=138.6818;InbreedingCoeff=0.3590;MQ=36.26;MQ0=48;MQRankSum=-2.968;QD=3.41;ReadPosRankSum=0.267;VQSLOD=0.8259;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:30:0:0,0,0	./.	./.	0/0:26,0:7:0:0,0,0	0/0:18,1:16:2.98:0,3,22	0/0:25,1:25:5.95:0,6,42	1/1:17,2:15:1.32:27,1,0	0/1:30,0:26:17.49:103,0,17	0/0:29,0:22:5.45:0,5,28	1/1:17,0:17:6.02:81,6,0	0/0:5,0:2:1.25:0,1,3	1/1:28,3:28:3.60:89,4,0	1/1:10,0:8:2.94:18,3,0	./.	1/1:27,4:26:5.81:34,6,0	1/1:18,2:18:6.80:106,7,0	0/1:18,0:14:81.54:82,0,106	1/1:11,1:10:5.17:106,5,0	1/1:8,2:9:11.01:181,11,0	./.	./.	0/0:27,1:23:5.95:0,6,51	0/0:19,0:15:2.90:0,3,16	./.	./.	0/0:22,0:19:23.88:0,24,317	1/1:24,1:23:8.40:76,8,0	0/0:5,0:4:3:0,3,28
chr10	82613066	.	CAGAG	C	861.98	PASS	AB=0.893;AC=9;AF=0.167;AN=54;BaseQRankSum=-5.331;DP=683;FS=5.719;HRun=0;HaplotypeScore=220.9521;InbreedingCoeff=0.4808;MQ=34.78;MQ0=57;MQRankSum=4.247;QD=7.84;ReadPosRankSum=-0.672;VQSLOD=2.4541;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:25:32.91:453,33,0	0/0:10,0:6:10.90:0,11,178	0/1:19,1:2:1.16:14,0,1	0/0:33,0:4:6.02:0,6,108	0/0:32,0:27:24.70:0,25,100	0/0:26,0:26:23.59:0,24,89	1/1:10,0:10:3.91:28,4,0	0/1:13,6:14:26.94:163,0,27	0/0:25,0:17:24.69:0,25,232	0/0:38,0:34:77.42:0,77,1104	0/0:20,0:17:5.82:0,6,24	0/0:40,0:34:52.30:0,52,351	0/0:21,0:19:27.02:0,27,378	0/0:23,0:21:26.05:0,26,174	0/0:50,0:45:40.53:0,41,236	0/0:27,0:24:28.77:0,29,174	0/0:27,0:21:25.90:0,26,235	0/0:17,0:15:25.72:0,26,253	0/1:16,0:14:30.31:208,0,30	./.	0/0:16,0:11:2.60:0,3,13	0/0:32,0:27:21.79:0,22,109	0/0:32,0:24:4.89:0,5,22	0/0:25,0:19:2.80:0,3,14	0/0:19,0:19:8.04:0,8,31	0/0:27,0:26:68.82:0,69,1356	1/1:14,0:10:11.72:139,12,0	0/0:16,0:15:42.14:0,42,1030
chr10	82613080	.	G	GAC	4319.15	PASS	AB=0.988;AC=28;AF=0.500;AN=56;BaseQRankSum=9.973;DP=764;FS=3.684;HRun=0;HaplotypeScore=221.0384;InbreedingCoeff=0.1015;MQ=40.72;MQ0=59;MQRankSum=-0.285;QD=8.50;ReadPosRankSum=1.355;VQSLOD=4.4960;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,4:28:53.99:0,54,570	0/1:10,0:7:48.21:48,0,79	0/0:67,0:12:27.75:0,28,240	0/0:66,0:5:11.40:0,11,146	1/1:33,0:28:32.64:336,33,0	1/1:29,0:29:31.28:276,31,0	0/1:8,1:9:16.38:16,0,208	0/0:18,0:15:39.11:0,39,516	0/1:20,0:17:63.02:208,0,63	0/1:42,0:37:99:460,0,484	1/1:21,0:18:11.17:93,11,0	0/1:39,0:35:57.69:503,0,58	0/1:21,0:20:99:156,0,147	0/1:25,0:23:14.36:279,0,14	1/1:50,0:46:37.41:526,37,0	0/1:26,0:24:6.99:309,0,7	0/1:28,0:25:57.96:248,0,58	0/1:15,0:14:64.51:224,0,65	0/1:21,1:21:32.63:33,0,483	0/0:13,1:13:9.03:0,9,136	1/1:20,0:16:5.96:47,6,0	0/1:31,0:27:21.99:210,0,22	1/1:28,0:21:18.25:191,18,0	1/1:20,0:17:6.45:48,6,0	1/1:19,0:19:7.90:108,8,0	0/0:28,0:27:75.21:0,75,1053	0/0:13,0:9:18.01:0,18,200	0/0:17,0:16:45.15:0,45,681
chr10	82613084	.	GAC	G	6328.61	PASS	AB=0.621;AC=26;AF=0.464;AN=56;BaseQRankSum=8.451;DP=805;FS=3.538;HRun=0;HaplotypeScore=221.1703;InbreedingCoeff=0.2042;MQ=43.42;MQ0=58;MQRankSum=0.506;QD=12.97;ReadPosRankSum=3.258;VQSLOD=4.5576;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:54.13:0,54,793	0/1:3,7:8:78.43:78,0,88	0/0:79,0:16:25.88:0,26,298	0/0:83,0:9:10.85:0,11,223	1/1:11,23:29:34.19:470,34,0	1/1:12,17:29:32.04:461,32,0	0/0:8,0:8:1.44:0,1,271	0/0:23,0:19:57.13:0,57,859	0/1:7,13:18:73.93:297,0,74	0/1:21,23:39:99:700,0,456	1/1:13,8:18:11.77:168,12,0	0/1:14,28:38:34.30:841,0,34	0/1:11,10:21:99:283,0,184	0/1:9,18:25:26.02:385,0,26	1/1:22,29:47:41.95:755,42,0	0/1:10,18:27:16.89:462,0,17	0/1:9,19:26:67.03:310,0,67	0/1:6,9:14:86.83:292,0,87	0/0:23,0:22:45.19:0,45,752	0/0:14,0:13:9.03:0,9,172	1/1:8,11:16:7.78:65,8,0	0/1:14,16:27:23.02:292,0,23	1/1:13,17:24:17.06:268,17,0	1/1:5,17:19:8.20:68,8,0	1/1:8,9:17:7.64:134,8,0	0/0:28,0:27:75.24:0,75,1349	0/0:13,0:9:20.41:0,20,288	0/0:17,0:16:44.81:0,45,779
chr10	82613090	.	G	GAC	6951.16	PASS	AB=0.978;AC=29;AF=0.518;AN=56;BaseQRankSum=7.797;DP=858;FS=2.251;HRun=0;HaplotypeScore=232.9990;InbreedingCoeff=0.3582;MQ=47.78;MQ0=56;MQRankSum=-0.401;QD=11.62;ReadPosRankSum=3.754;VQSLOD=4.8118;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:63.17:0,63,914	0/1:11,0:9:51.29:81,0,51	0/0:92,0:20:24.87:0,25,428	0/1:96,0:10:2.30:2,0,218	1/1:34,0:30:38.61:532,39,0	1/1:31,1:32:38.36:563,38,0	0/0:9,0:9:5.76:0,6,239	0/0:26,0:23:69.21:0,69,983	0/1:21,0:19:12.20:341,0,12	0/1:43,3:41:99:823,0,245	1/1:20,0:18:11.73:183,12,0	1/1:42,1:40:49.30:858,49,0	0/1:21,2:23:67.76:360,0,68	0/1:27,0:25:6.75:391,0,7	1/1:52,1:49:40.35:696,40,0	1/1:28,0:27:2.48:492,2,0	0/1:27,1:26:24.95:392,0,25	0/1:16,0:15:47.55:224,0,48	0/0:26,0:24:69.25:0,69,938	0/0:16,0:15:15.04:0,15,207	1/1:18,2:17:11.86:177,12,0	0/1:30,0:27:2.19:277,0,2	1/1:28,0:23:17.85:254,18,0	1/1:22,0:19:11.36:177,11,0	1/1:17,0:17:7.89:127,8,0	0/0:28,0:27:75.25:0,75,1147	0/0:12,0:9:21.07:0,21,321	0/0:19,0:18:47.97:0,48,651
chr10	82613117	.	C	CAG	1877.87	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.273;DP=965;FS=1.927;HRun=0;HaplotypeScore=263.0844;InbreedingCoeff=0.9915;MQ=61.06;MQ0=21;MQRankSum=1.315;QD=32.95;ReadPosRankSum=1.032;VQSLOD=3.3512;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:90.27:0,90,1093	0/0:13,0:11:18.06:0,18,222	0/0:100,0:44:39.90:0,40,622	0/0:95,0:33:53.80:0,54,479	0/0:34,0:34:63.03:0,63,753	0/0:33,0:33:51.05:0,51,610	0/0:15,0:15:33.09:0,33,394	0/0:50,0:49:99:0,114,1333	0/0:29,0:28:50.75:0,51,601	0/0:43,0:42:77.60:0,78,871	0/0:22,0:22:29.83:0,30,355	0/0:43,0:42:78.24:0,78,958	0/0:33,0:32:56.91:0,57,665	0/0:28,0:26:32.94:0,33,406	0/0:54,0:53:77.61:0,78,912	0/0:32,0:31:48.15:0,48,591	0/0:32,0:30:44.49:0,44,517	0/0:15,0:15:24.03:0,24,295	0/0:29,0:29:63:0,63,728	0/0:25,0:25:51.16:0,51,627	0/0:27,0:27:39.11:0,39,466	0/0:26,0:26:40.97:0,41,492	0/0:27,0:24:29.50:0,29,339	0/0:29,0:28:23.85:0,24,281	0/0:21,0:21:27.07:0,27,314	1/1:2,33:36:96.28:1510,96,0	0/0:10,0:10:27.02:0,27,301	1/1:6,15:21:30.10:489,30,0
chr10	82616100	.	C	CAAA	4693.09	PASS	AB=0.579;AC=45;AF=0.804;AN=56;BaseQRankSum=-0.544;DP=686;FS=1.040;HRun=14;HaplotypeScore=132.1043;InbreedingCoeff=0.6062;MQ=77.35;MQ0=0;MQRankSum=-2.713;QD=7.87;ReadPosRankSum=-4.670;VQSLOD=0.6569;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,30:49:25.85:262,26,0	1/1:4,0:8:10.16:68,10,0	0/0:28,0:22:9.96:0,10,80	0/0:20,0:19:10.53:0,11,90	1/1:7,0:18:20.79:156,21,0	1/1:8,0:37:13.20:94,13,0	1/1:20,0:20:26.98:311,27,0	1/1:17,8:26:42.34:517,42,0	1/1:5,0:22:6:62,6,0	1/1:13,0:33:39.70:374,40,0	1/1:4,0:17:22.11:178,22,0	1/1:13,0:28:22.11:189,22,0	1/1:7,0:18:23.91:235,24,0	1/1:11,0:26:10.51:82,11,0	0/1:15,0:36:16.42:51,0,16	1/1:2,11:24:11.46:113,11,0	1/1:9,0:34:24.69:194,25,0	0/1:4,0:15:19.61:41,0,20	1/1:12,8:22:40.99:453,41,0	1/1:11,0:22:39.62:454,40,0	1/1:5,1:22:11.98:124,12,0	1/1:6,0:24:36.98:295,37,0	1/1:10,0:30:21.05:213,21,0	0/1:2,8:18:0:0,0,0	1/1:7,0:22:12.27:104,12,0	0/0:29,0:29:7.49:0,7,84	1/1:7,0:24:9:124,9,0	0/0:9,0:11:7.30:0,7,76
chr10	82617738	.	CT	C	689.73	PASS	AB=0.900;AC=18;AF=0.321;AN=56;BaseQRankSum=2.823;DP=486;FS=4.382;HRun=15;HaplotypeScore=60.3105;InbreedingCoeff=0.3664;MQ=64.60;MQ0=4;MQRankSum=1.040;QD=3.35;ReadPosRankSum=0.391;VQSLOD=-0.0792;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,13:20:9.32:164,9,0	0/0:10,0:11:10.56:0,11,203	0/0:25,1:12:2.95:0,3,95	0/0:18,1:9:10.96:0,11,65	0/0:27,3:31:24.86:0,25,352	0/0:22,0:22:12.55:0,13,298	1/1:5,12:17:0.03:125,0,0	1/1:16,9:27:4.05:139,4,0	0/1:10,0:10:1.15:1,0,109	0/1:20,2:25:13.30:13,0,231	0/0:13,0:13:9.86:0,10,192	0/0:10,2:12:1.73:0,2,133	0/1:11,1:12:19.64:20,0,45	0/0:16,0:16:15.24:0,15,227	0/0:19,2:23:6.05:0,6,259	0/1:17,2:20:2.90:3,0,194	0/1:17,4:21:15.97:16,0,236	0/0:23,0:23:2.70:0,3,206	1/1:8,8:17:9.44:136,9,0	1/1:5,5:11:16.77:102,17,0	0/1:6,2:8:4.29:4,0,86	0/0:15,0:15:32.05:0,32,246	0/0:14,0:14:27:0,27,237	0/0:10,0:10:17.84:0,18,139	0/0:18,2:20:15.44:0,15,377	0/0:7,0:13:26.40:0,26,180	1/1:5,9:17:23.79:133,24,0	0/0:2,1:11:9.64:0,10,130
chr10	82617934	.	T	TG	95.21	PASS	AB=0.667;AC=11;AF=0.344;AN=32;BaseQRankSum=2.427;DP=210;FS=15.515;HRun=0;HaplotypeScore=55.5581;InbreedingCoeff=0.6756;MQ=78.69;MQ0=5;MQRankSum=1.087;QD=11.90;ReadPosRankSum=-2.189;VQSLOD=2.3874;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:39.13:0,39,539	1/1:1,0:1:3.01:36,3,0	0/0:42,0:14:32.35:0,32,332	0/0:36,0:13:33.77:0,34,301	./.	./.	0/0:8,0:8:24.01:0,24,298	0/0:29,0:29:84.03:0,84,1084	1/1:1,0:1:3:25,3,0	./.	1/1:0,1:1:3.01:38,3,0	1/1:2,0:1:3.01:35,3,0	./.	./.	./.	./.	./.	0/1:1,1:2:0.36:40,0,0	0/0:16,0:16:45.05:0,45,570	0/0:6,0:6:17.93:0,18,223	./.	1/1:0,1:1:3.01:40,3,0	./.	./.	./.	0/0:18,0:18:54.17:0,54,738	0/0:14,0:14:42.14:0,42,569	0/0:12,0:12:36.05:0,36,479
chr10	82617937	.	CT	C	1180.69	PASS	AB=0.727;AC=11;AF=0.458;AN=24;BaseQRankSum=1.509;DP=222;FS=1.537;HRun=13;HaplotypeScore=62.8809;InbreedingCoeff=0.7279;MQ=76.25;MQ0=6;MQRankSum=-2.871;QD=13.73;ReadPosRankSum=0.861;VQSLOD=4.2373;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,7:14:25.86:178,26,0	./.	0/0:48,0:14:10.45:0,10,102	0/0:45,0:13:11.83:0,12,150	./.	./.	1/1:2,5:8:10.21:120,10,0	1/1:6,20:27:67.64:486,68,0	./.	./.	./.	./.	./.	./.	./.	./.	0/0:1,0:1:2.84:0,3,14	0/0:1,0:2:1.55:0,2,4	0/1:10,6:16:3.52:146,0,4	1/1:1,5:6:14.91:109,15,0	./.	./.	./.	./.	./.	0/0:20,0:20:48.07:0,48,463	1/1:3,11:14:35.79:262,36,0	0/0:15,0:15:36.50:0,37,343
chr10	82617954	.	ATT	A	2058.26	PASS	AC=12;AF=0.600;AN=20;BaseQRankSum=-1.173;DP=263;FS=1.480;HRun=10;HaplotypeScore=94.8916;InbreedingCoeff=0.9369;MQ=81.84;MQ0=8;MQRankSum=-3.355;QD=22.13;ReadPosRankSum=1.440;VQSLOD=3.2212;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:16:33.08:367,33,0	./.	0/0:72,0:26:28.01:0,28,470	0/0:56,0:18:4.70:0,5,195	./.	./.	1/1:1,7:8:21.05:234,21,0	1/1:9,21:31:68.87:734,69,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:4,8:12:24.06:267,24,0	1/1:0,6:6:14.95:151,15,0	./.	./.	./.	./.	./.	0/0:17,0:18:41.61:0,42,587	1/1:4,15:19:39.08:424,39,0	0/0:17,0:17:27.08:0,27,407
chr10	82617984	.	C	CA	213.79	PASS	AC=20;AF=0.500;AN=40;BaseQRankSum=5.377;DP=224;FS=40.902;HRun=0;HaplotypeScore=64.7825;InbreedingCoeff=0.6831;MQ=102.05;MQ0=2;MQRankSum=0.421;QD=13.36;ReadPosRankSum=-4.081;VQSLOD=1.5642;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:59.82:0,60,697	./.	0/0:40,0:24:40.12:0,40,486	0/0:41,0:25:22.43:0,22,413	1/1:0,1:1:3.01:33,3,0	1/1:3,0:3:5.97:45,6,0	0/0:14,0:14:42.06:0,42,542	0/0:27,0:27:65.84:0,66,683	1/1:0,1:1:3.01:32,3,0	./.	1/1:0,2:2:3.01:31,3,0	1/1:0,1:1:3.01:30,3,0	./.	1/1:0,1:1:3.01:32,3,0	1/1:0,2:2:3.01:32,3,0	1/1:1,1:2:2.80:30,3,0	./.	./.	0/0:10,0:10:30.04:0,30,368	0/0:9,0:9:23.76:0,24,298	./.	1/1:0,2:2:6.02:67,6,0	./.	./.	1/1:0,1:1:3.01:30,3,0	0/0:14,0:14:39.11:0,39,509	0/0:20,0:20:51.10:0,51,705	0/0:8,0:8:24.03:0,24,278
chr10	82622175	.	ATG	A	97.47	PASS	AB=0.935;AC=18;AF=0.409;AN=44;BaseQRankSum=-0.722;DP=529;FS=4.349;HRun=0;HaplotypeScore=93.7364;InbreedingCoeff=0.2687;MQ=55.07;MQ0=22;MQRankSum=1.092;QD=0.54;ReadPosRankSum=2.239;VQSLOD=1.6168;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:31:20.56:0,21,155	0/1:6,0:6:18.64:19,0,19	./.	./.	./.	1/1:15,0:13:3:31,3,0	0/0:36,0:36:12.77:0,13,184	1/1:27,0:26:1.04:9,1,0	1/1:16,1:17:5.50:38,6,0	./.	0/0:6,0:6:0:0,0,0	0/1:17,6:23:7.31:23,0,7	1/1:13,1:14:2.65:11,3,0	0/0:15,0:16:2.99:0,3,24	1/1:22,0:22:2.84:14,3,0	0/1:18,0:18:35.23:44,0,35	0/1:17,1:17:3.23:8,0,3	0/0:11,0:10:1.25:0,1,3	0/0:22,0:19:12.51:0,13,150	0/0:12,0:11:3.01:0,3,43	0/0:44,0:41:3.43:0,3,20	1/1:9,1:10:5.19:19,5,0	./.	./.	1/1:11,0:11:1.27:12,1,0	0/0:24,0:24:11.51:0,12,107	0/0:14,0:14:11.99:0,12,109	0/0:14,0:14:3.48:0,3,42
chr10	82622227	.	CTG	C	1043.02	PASS	AB=0.669;AC=20;AF=0.385;AN=52;BaseQRankSum=6.600;DP=525;FS=9.181;HRun=0;HaplotypeScore=167.2082;InbreedingCoeff=0.3707;MQ=39.63;MQ0=31;MQRankSum=-4.911;QD=4.40;ReadPosRankSum=1.682;VQSLOD=2.5492;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:39:20.96:0,21,180	1/1:3,2:4:2.74:34,3,0	0/0:4,0:2:5.98:0,6,62	0/0:15,0:10:20.97:0,21,263	./.	1/1:5,10:14:1.45:8,1,0	0/0:43,0:39:48.09:0,48,328	0/0:28,0:28:62.73:0,63,737	0/1:6,5:11:2.82:125,0,3	0/1:10,10:17:9.11:347,0,9	0/0:5,1:6:0:0,0,0	0/1:10,16:26:11.21:92,0,11	1/1:8,13:21:13.18:147,13,0	1/1:7,11:18:0.42:1,0,0	0/0:13,7:18:2.71:0,3,16	0/1:10,16:25:5.46:6,0,5	0/1:14,11:22:0.07:137,0,0	1/1:8,6:13:15.76:251,16,0	0/0:24,0:22:44.92:0,45,436	0/0:15,1:15:9.68:0,10,61	1/1:22,4:21:1.23:3,1,0	./.	0/1:10,6:14:0.79:23,0,1	0/0:11,7:17:1.74:0,2,6	1/1:7,7:13:1.29:14,1,0	0/0:28,0:24:53.54:0,54,745	0/0:13,0:12:3.98:0,4,142	0/0:7,0:6:6.02:0,6,100
chr10	82622231	.	G	GTC	1129.47	PASS	AB=0.936;AC=18;AF=0.360;AN=50;BaseQRankSum=7.025;DP=532;FS=12.551;HRun=0;HaplotypeScore=179.1671;InbreedingCoeff=0.3940;MQ=41.83;MQ0=27;MQRankSum=-6.511;QD=5.30;ReadPosRankSum=2.761;VQSLOD=2.3788;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:40.36:0,40,521	1/1:4,1:4:3.48:39,3,0	0/0:7,0:5:8.99:0,9,110	0/0:17,0:13:27.06:0,27,354	./.	0/0:14,0:13:2.16:0,2,7	0/0:43,0:39:68.60:0,69,856	0/0:31,0:31:91.29:0,91,1090	1/1:10,2:12:1.79:122,2,0	0/1:18,2:17:26.09:441,0,26	./.	0/1:24,0:24:0.36:105,0,0	0/1:20,2:22:4.15:123,0,4	0/1:18,1:19:0:1,0,0	0/0:19,1:18:3.24:0,3,17	0/0:19,5:24:1.44:0,1,5	1/1:22,3:22:4.38:129,4,0	0/1:12,1:13:9.25:264,0,9	0/0:25,0:23:64.91:0,65,860	0/0:16,0:15:17.77:0,18,221	1/1:24,1:19:4.07:12,4,0	./.	1/1:14,1:14:2.96:19,3,0	0/1:17,2:18:0:0,0,0	1/1:12,1:12:1.09:14,1,0	0/0:28,0:25:61.17:0,61,773	0/0:15,0:14:30.07:0,30,392	0/0:7,0:6:9.03:0,9,123
chr10	82622235	.	CTG	C	2798.34	PASS	AB=0.661;AC=25;AF=0.481;AN=52;BaseQRankSum=6.142;DP=530;FS=20.213;HRun=0;HaplotypeScore=163.6503;InbreedingCoeff=0.0887;MQ=45.82;MQ0=25;MQRankSum=0.448;QD=7.46;ReadPosRankSum=3.806;VQSLOD=2.1589;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,14:34:68.14:335,0,68	1/1:1,3:3:2.70:20,3,0	0/0:11,0:7:11.58:0,12,208	0/0:22,0:16:18.48:0,18,465	./.	0/0:6,9:14:0.89:0,1,2	0/1:30,13:39:55.18:559,0,55	0/1:21,9:30:99:287,0,477	0/1:6,6:12:1.34:37,0,1	0/1:11,10:18:7.07:307,0,7	0/0:4,1:5:0:0,0,0	0/1:7,15:22:4.14:30,0,4	1/1:5,17:22:22.78:127,23,0	1/1:6,14:20:3.42:26,3,0	0/1:6,10:15:0.13:0,0,0	0/1:7,17:24:12.31:14,0,12	1/1:14,10:21:8.93:88,9,0	1/1:6,8:13:20.66:221,21,0	0/1:14,15:28:99:470,0,263	0/1:6,11:16:3.01:150,0,3	0/0:22,3:19:5.24:0,5,21	./.	1/1:4,11:14:3.76:16,4,0	0/0:13,4:16:1.74:0,2,6	1/1:6,5:10:0.27:1,0,0	0/0:29,0:26:67.37:0,67,1046	0/1:6,10:15:76.61:258,0,77	0/0:6,0:5:14.89:0,15,164
chr10	82622237	.	G	GTGTC	2120.34	PASS	AB=0.997;AC=31;AF=0.596;AN=52;BaseQRankSum=7.933;DP=542;FS=39.187;HRun=0;HaplotypeScore=187.4947;InbreedingCoeff=0.1453;MQ=45.50;MQ0=25;MQRankSum=-1.844;QD=4.98;ReadPosRankSum=3.421;VQSLOD=1.2213;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,1:34:56.10:56,0,84	1/1:4,0:3:3.01:39,3,0	0/0:11,0:7:11.30:0,11,219	0/0:23,0:17:37.87:0,38,562	./.	1/1:14,0:13:0.89:2,1,0	0/1:43,0:39:56.24:167,0,56	0/1:30,0:30:99:103,0,338	0/1:11,0:11:1.58:90,0,2	0/1:22,0:19:0.89:591,0,1	0/1:5,0:5:0:0,0,0	0/1:21,0:21:4.43:82,0,4	1/1:21,0:22:25.47:214,25,0	1/1:20,0:20:2.63:26,3,0	0/1:17,0:16:0.24:0,0,0	0/1:25,0:25:4.42:18,0,4	1/1:25,0:22:14.15:166,14,0	1/1:14,0:13:26.06:415,26,0	0/1:31,0:30:99:192,0,210	1/1:16,0:15:5.23:37,5,0	1/1:24,3:21:0.47:1,0,0	./.	1/1:14,0:15:5.83:34,6,0	0/0:20,1:20:0:0,0,0	1/1:12,0:11:0.94:2,1,0	0/0:29,0:26:67.38:0,67,1104	0/1:17,0:16:27.75:28,0,86	0/0:6,0:5:14.89:0,15,172
chr10	82622249	.	C	CTG	2619.49	PASS	AB=0.588;AC=32;AF=0.571;AN=56;BaseQRankSum=6.240;DP=575;FS=1.927;HRun=0;HaplotypeScore=182.2725;InbreedingCoeff=0.6160;MQ=51.73;MQ0=17;MQRankSum=-4.748;QD=8.73;ReadPosRankSum=0.419;VQSLOD=3.3775;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:41.20:0,41,377	1/1:0,4:3:3.01:41,3,0	0/0:21,0:17:46.87:0,47,556	0/0:34,0:28:59.97:0,60,754	1/1:3,9:12:3.01:53,3,0	1/1:4,12:15:3.01:54,3,0	0/0:36,0:33:55.18:0,55,483	0/0:28,0:28:72.20:0,72,912	1/1:5,8:13:15.12:174,15,0	0/1:7,17:21:23.39:729,0,23	1/1:3,3:6:3.01:53,3,0	1/1:7,13:20:11.71:186,12,0	0/1:7,16:23:22.40:268,0,22	1/1:7,13:20:9.03:132,9,0	0/0:6,10:16:0.34:0,0,0	1/1:3,25:29:3.01:53,3,0	1/1:12,11:21:20.97:261,21,0	1/1:3,8:11:28.65:401,29,0	0/0:33,0:32:68.16:0,68,912	0/0:19,1:19:23.40:0,23,230	1/1:12,15:23:10.09:118,10,0	1/1:11,9:18:6.02:106,6,0	1/1:13,6:19:8.98:80,9,0	1/1:8,13:20:2.56:53,3,0	1/1:3,8:10:2.60:52,3,0	0/0:29,0:27:69.19:0,69,923	0/0:16,0:15:23.69:0,24,190	0/0:6,0:5:15.05:0,15,206
chr10	82622255	.	C	CTG	47.69	PASS	AB=0.982;AC=21;AF=0.375;AN=56;BaseQRankSum=8.885;DP=569;FS=3.515;HRun=0;HaplotypeScore=191.4553;InbreedingCoeff=0.2141;MQ=58.19;MQ0=14;MQRankSum=-6.004;QD=0.18;ReadPosRankSum=4.090;VQSLOD=2.7164;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:44.22:0,44,428	0/1:6,0:5:0.63:1,0,35	0/0:27,0:23:62.99:0,63,764	0/0:39,0:33:87.17:0,87,1175	0/1:15,0:14:7.54:8,0,56	1/1:13,1:14:1.25:4,1,0	0/0:34,0:31:55.94:0,56,490	0/0:27,0:27:63.19:0,63,801	0/0:14,0:14:4.15:0,4,57	0/1:24,0:21:33.54:51,0,34	1/1:6,0:6:2.22:7,2,0	1/1:18,0:18:3.20:16,3,0	0/1:23,0:23:0.75:1,0,23	1/1:18,0:18:0.45:5,0,0	0/0:14,2:16:0.34:0,0,0	0/1:28,1:29:10.26:10,0,33	0/1:20,1:19:6.91:7,0,64	1/1:11,0:11:14.44:45,14,0	0/0:32,0:31:80.41:0,80,896	0/0:22,0:21:32.31:0,32,311	0/1:24,0:21:14.89:15,0,35	0/1:19,2:20:6.90:7,0,18	0/0:16,1:17:10.92:0,11,117	0/1:18,0:17:0.43:0,0,36	1/1:11,0:10:2.52:16,3,0	0/0:28,0:26:69.23:0,69,935	0/0:13,0:13:23.72:0,24,192	0/0:6,0:5:15.05:0,15,206
chr10	82622527	.	AAAG	A	2308.13	PASS	AB=0.974;AC=35;AF=0.625;AN=56;BaseQRankSum=6.001;DP=454;FS=6.867;HRun=0;HaplotypeScore=72.4460;InbreedingCoeff=0.4569;MQ=52.06;MQ0=30;MQRankSum=1.817;QD=7.35;ReadPosRankSum=0.121;VQSLOD=1.3788;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:46.38:0,46,774	1/1:10,0:10:20.69:134,21,0	0/0:8,0:4:11.38:0,11,73	0/0:12,0:6:8.16:0,8,105	1/1:15,1:14:30.39:244,30,0	1/1:12,0:12:10.25:72,10,0	0/0:18,0:17:35.90:0,36,437	0/1:37,1:37:83.75:84,0,469	1/1:11,0:10:18.17:124,18,0	1/1:10,2:12:23.67:190,24,0	1/1:10,2:11:5.88:37,6,0	1/1:11,0:10:5.90:37,6,0	1/1:5,1:5:2.96:19,3,0	1/1:16,0:15:4.69:67,5,0	1/1:15,0:13:8.85:56,9,0	1/1:14,1:11:14.72:127,15,0	1/1:34,1:32:49.27:496,49,0	0/1:29,0:25:40.77:184,0,41	0/0:18,0:18:5.99:0,6,298	0/0:13,0:12:18.72:0,19,302	1/1:6,0:5:2.96:19,3,0	0/1:10,0:10:31.02:57,0,31	1/1:9,0:9:12.51:80,13,0	0/1:23,3:23:52.85:350,0,53	1/1:12,1:11:12.81:110,13,0	0/0:19,0:19:37.06:0,37,726	0/0:16,0:14:6.56:0,7,279	0/1:12,0:11:17.08:17,0,247
chr10	82622528	.	AAG	A	4700.85	PASS	AB=0.818;AC=35;AF=0.625;AN=56;BaseQRankSum=1.363;DP=453;FS=3.404;HRun=0;HaplotypeScore=59.3361;InbreedingCoeff=0.4493;MQ=52.35;MQ0=30;MQRankSum=1.314;QD=14.83;ReadPosRankSum=-0.452;VQSLOD=4.2347;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:35.93:0,36,547	1/1:1,9:10:21.07:318,21,0	0/0:8,0:4:2.14:0,2,44	0/0:11,1:6:9.04:0,9,89	1/1:6,10:14:39.89:522,40,0	1/1:2,10:12:11.20:177,11,0	0/0:18,0:17:35.85:0,36,332	0/1:38,0:37:61.65:62,0,347	1/1:7,4:10:24.34:272,24,0	1/1:4,8:12:24.03:272,24,0	1/1:3,9:11:6.02:89,6,0	1/1:1,10:10:6.02:89,6,0	1/1:2,4:5:3.01:46,3,0	1/1:5,11:15:13.60:186,14,0	1/1:3,12:13:9.03:131,9,0	1/1:3,12:11:15.05:213,15,0	1/1:26,10:33:67.14:932,67,0	0/1:9,19:24:28.34:401,0,28	0/1:17,0:17:10.10:10,0,200	0/0:13,0:12:19.42:0,19,246	1/1:1,4:4:3.01:46,3,0	0/1:3,6:9:20.22:114,0,20	1/1:2,7:9:16.04:169,16,0	0/1:23,3:23:20.79:494,0,21	1/1:12,1:11:16.93:158,17,0	0/0:19,0:19:16.60:0,17,589	0/0:17,0:15:8.26:0,8,207	0/0:12,0:11:2.47:0,2,222
chr10	82622529	.	AG	A	3125.93	PASS	AB=0.930;AC=36;AF=0.643;AN=56;BaseQRankSum=5.230;DP=446;FS=2.703;HRun=1;HaplotypeScore=58.3854;InbreedingCoeff=0.5223;MQ=52.83;MQ0=28;MQRankSum=2.007;QD=10.15;ReadPosRankSum=1.053;VQSLOD=1.6026;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:42.99:0,43,370	1/1:9,0:9:21.02:193,21,0	0/0:8,0:4:0.73:0,1,40	0/0:12,0:6:9.81:0,10,86	1/1:13,3:14:40.55:348,41,0	1/1:11,1:12:14.93:124,15,0	0/0:18,0:17:35.04:0,35,228	0/1:37,0:36:21.58:22,0,295	1/1:10,1:10:26.87:233,27,0	1/1:11,1:12:23.17:184,23,0	1/1:11,0:11:6:54,6,0	1/1:11,0:10:6:54,6,0	1/1:6,0:5:3:28,3,0	1/1:12,4:15:15.01:136,15,0	1/1:14,0:12:9:80,9,0	1/1:15,0:11:15.01:135,15,0	1/1:34,3:34:76.62:651,77,0	0/1:25,3:24:17.66:236,0,18	0/0:17,0:17:7.04:0,7,147	0/0:12,0:11:25.04:0,25,194	1/1:5,0:4:3:28,3,0	0/1:7,2:9:6.55:78,0,7	1/1:7,2:9:17.87:156,18,0	1/1:22,4:23:3.40:406,3,0	1/1:7,5:10:15.73:131,16,0	0/0:19,0:19:31.42:0,31,518	0/0:17,0:15:11.33:0,11,141	0/1:12,0:11:41.91:42,0,194
chr10	82622530	.	G	GA	1581.67	PASS	AB=0.941;AC=19;AF=0.339;AN=56;BaseQRankSum=-5.647;DP=452;FS=6.877;HRun=12;HaplotypeScore=68.2759;InbreedingCoeff=0.1819;MQ=54.05;MQ0=27;MQRankSum=-0.992;QD=5.73;ReadPosRankSum=-5.793;VQSLOD=0.4707;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:10,25:36:15.53:480,16,0	0/0:9,0:9:3.23:0,3,17	0/0:10,0:5:9.32:0,9,49	0/1:11,0:6:3.31:3,0,47	0/1:17,0:15:10:33,0,10	0/1:12,0:12:2.66:5,0,3	1/1:7,11:17:2.15:182,2,0	1/1:11,20:34:9.21:355,9,0	0/1:11,0:10:1.92:10,0,2	0/1:12,0:12:9.55:10,0,10	0/1:12,0:12:0.55:2,0,1	0/0:11,0:10:3.37:0,3,9	0/0:7,0:6:1.79:0,2,5	0/0:16,0:15:3.38:0,3,13	0/1:15,0:13:0.04:3,0,0	0/0:15,0:11:8.91:0,9,25	0/1:37,0:34:13.30:13,0,47	0/0:29,0:25:14.33:0,14,58	1/1:5,13:18:38.72:355,39,0	0/1:9,4:12:25.78:99,0,26	0/0:5,0:4:1.82:0,2,5	0/0:9,0:9:1.57:0,2,18	0/0:10,0:10:3.59:0,4,11	0/0:25,0:22:11.31:0,11,73	0/1:12,0:10:2.93:31,0,3	0/0:18,0:19:45.04:0,45,331	0/1:5,12:15:14.35:150,0,14	0/0:11,0:10:12.19:0,12,104
chr10	82623222	.	CT	C	5061.03	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-0.231;DP=655;FS=4.767;HRun=4;HaplotypeScore=96.2137;InbreedingCoeff=0.9963;MQ=79.63;MQ0=0;MQRankSum=-1.983;QD=29.77;ReadPosRankSum=1.879;VQSLOD=4.9680;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,43:44:99:1295,108,0	0/0:12,0:12:36.12:0,36,503	0/0:22,0:22:38.38:0,38,683	0/0:23,0:23:54.16:0,54,711	0/0:20,0:20:57.18:0,57,779	0/0:17,0:17:45.14:0,45,613	1/1:3,24:27:57.16:672,57,0	1/1:0,23:23:69.21:825,69,0	0/0:24,0:24:63.20:0,63,862	0/0:20,0:20:57.18:0,57,780	0/0:16,0:16:45.14:0,45,612	0/0:26,0:26:66.20:0,66,891	0/0:19,0:19:42.11:0,42,548	0/0:30,0:30:81.27:0,81,1130	0/0:35,0:35:96.27:0,96,1291	0/0:27,0:27:69.22:0,69,950	0/0:32,0:32:84.25:0,84,1154	0/0:33,0:33:84.21:0,84,1130	1/1:1,21:22:63.14:710,63,0	1/1:2,23:25:60.01:696,60,0	0/0:30,0:30:72.17:0,72,957	0/0:18,0:18:51.16:0,51,698	0/0:18,0:18:51.04:0,51,639	0/0:19,0:19:54.12:0,54,715	0/0:13,0:13:24.08:0,24,336	0/0:26,0:26:78.24:0,78,1062	1/1:0,29:29:71.95:863,72,0	0/0:5,0:5:15.05:0,15,209
chr10	82623265	.	T	TG	7356.52	PASS	AB=0.591;AC=35;AF=0.625;AN=56;BaseQRankSum=4.611;DP=603;FS=8.584;HRun=0;HaplotypeScore=100.4555;InbreedingCoeff=0.8776;MQ=71.37;MQ0=1;MQRankSum=-1.762;QD=20.05;ReadPosRankSum=5.029;VQSLOD=6.6925;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:87.28:0,87,1193	1/1:6,0:6:5.14:52,5,0	0/0:25,0:24:8.19:0,8,459	0/0:10,0:10:24.06:0,24,311	1/1:0,15:15:34.63:368,35,0	1/1:6,18:24:14.26:380,14,0	0/0:24,0:24:63.20:0,63,863	0/0:20,0:20:47.16:0,47,665	1/1:4,19:23:43.54:481,44,0	1/1:3,8:11:7.81:175,8,0	1/1:7,8:15:12.69:275,13,0	1/1:1,33:34:81.05:830,81,0	1/1:3,25:28:30.23:487,30,0	1/1:2,18:20:38.85:428,39,0	1/1:3,22:25:57.57:615,58,0	1/1:3,22:25:31.22:518,31,0	1/1:5,28:33:59.77:726,60,0	1/1:4,23:27:24.65:561,25,0	0/0:22,0:22:66.15:0,66,841	0/0:17,0:17:51.16:0,51,694	1/1:5,27:32:54.16:593,54,0	1/1:5,5:10:20.23:221,20,0	0/1:4,9:13:19.31:195,0,19	1/1:1,11:12:22.42:251,22,0	1/1:1,13:14:20.94:200,21,0	0/0:35,0:35:87.44:0,87,1353	0/0:34,0:33:93.26:0,93,1228	0/0:13,0:13:39.12:0,39,522
chr10	82623266	.	T	TGG	7233.14	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=5.356;DP=586;FS=3.048;HRun=8;HaplotypeScore=109.5643;InbreedingCoeff=0.9677;MQ=69.78;MQ0=2;MQRankSum=-1.001;QD=20.43;ReadPosRankSum=1.390;VQSLOD=3.4828;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:78.20:0,78,869	1/1:6,0:6:6.02:91,6,0	0/0:26,0:23:17.97:0,18,386	0/0:9,0:9:20.77:0,21,212	1/1:14,0:14:39.02:384,39,0	1/1:20,0:22:39.05:381,39,0	0/0:24,0:24:63.15:0,63,692	0/0:20,0:20:42.09:0,42,468	1/1:21,1:22:47.89:476,48,0	1/1:13,0:13:7.43:208,7,0	1/1:15,0:15:31.22:349,31,0	1/1:34,0:34:81.12:829,81,0	1/1:26,0:26:28.02:415,28,0	1/1:17,1:18:41.84:410,42,0	1/1:24,0:24:63.07:606,63,0	1/1:26,0:26:33.72:475,34,0	1/1:32,0:33:74.53:678,75,0	1/1:26,0:26:18.51:479,19,0	0/0:21,0:21:57.15:0,57,635	0/0:17,0:17:39.08:0,39,424	1/1:31,0:31:57.06:561,57,0	1/1:8,1:9:24.04:252,24,0	1/1:13,0:13:21.04:210,21,0	1/1:11,0:11:24.48:231,24,0	1/1:10,1:11:21.01:201,21,0	0/0:36,0:36:44.40:0,44,863	0/0:31,0:30:78.21:0,78,869	0/0:13,0:13:33.08:0,33,367
chr10	82625371	.	A	AT	2063.35	PASS	AB=0.927;AC=39;AF=0.722;AN=54;BaseQRankSum=8.714;DP=280;FS=4.766;HRun=3;HaplotypeScore=67.0872;InbreedingCoeff=0.1571;MQ=53.68;MQ0=0;MQRankSum=-5.469;QD=8.29;ReadPosRankSum=6.116;VQSLOD=0.7616;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:54.53:316,55,0	1/1:1,1:2:5.95:51,6,0	0/0:7,0:6:6.43:0,6,75	0/0:2,0:2:6.02:0,6,74	0/1:13,0:13:39.50:75,0,40	1/1:20,0:20:29.67:196,30,0	1/1:6,0:6:8.83:53,9,0	0/1:40,0:40:99:309,0,446	1/1:5,0:5:5.93:39,6,0	1/1:8,0:8:16.74:133,17,0	1/1:5,0:5:5.91:38,6,0	1/1:9,0:9:5.93:39,6,0	1/1:6,0:6:2.96:19,3,0	0/1:4,2:6:83.93:84,0,92	0/1:3,1:4:25.15:68,0,25	1/1:8,0:8:8.90:59,9,0	1/1:7,2:9:14.74:106,15,0	0/1:8,0:8:13.83:14,0,31	0/1:16,0:16:84.18:84,0,151	0/1:14,1:15:69.38:134,0,69	./.	1/1:4,0:4:2.96:19,3,0	1/1:5,0:5:2.96:19,3,0	1/1:2,0:2:2.96:19,3,0	1/1:6,0:6:8.90:59,9,0	0/0:14,0:14:42.12:0,42,509	1/1:20,0:20:49.85:295,50,0	0/0:8,0:8:21.07:0,21,259
chr10	82625373	.	T	TTATTTGTTTATC	7582.83	PASS	AC=46;AF=0.852;AN=54;BaseQRankSum=2.107;DP=302;FS=0.000;HRun=0;HaplotypeScore=92.3447;InbreedingCoeff=0.6070;MQ=55.70;MQ0=0;MQRankSum=-3.093;QD=28.08;ReadPosRankSum=2.014;VQSLOD=3.2160;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:32:33.61:181,34,0	1/1:1,0:2:6.02:125,6,0	0/0:7,0:6:9.86:0,10,132	0/0:2,0:2:5.97:0,6,133	1/1:0,0:14:15.45:427,15,0	1/1:0,0:21:30.10:1713,30,0	1/1:1,0:8:4.66:11,5,0	1/1:2,0:46:70.89:438,71,0	1/1:0,0:6:6.02:342,6,0	1/1:0,0:8:16.80:584,17,0	1/1:0,0:5:6.02:342,6,0	1/1:0,1:10:6.02:343,6,0	1/1:0,0:6:3.01:171,3,0	1/1:5,0:6:9.43:153,9,0	1/1:4,0:4:8.96:151,9,0	1/1:0,0:10:9.03:513,9,0	1/1:2,0:11:13.29:598,13,0	1/1:1,0:11:3.01:170,3,0	1/1:0,0:14:22.19:116,22,0	1/1:1,0:16:21.94:89,22,0	./.	1/1:0,0:4:5.93:189,6,0	1/1:0,0:5:3.08:171,3,0	1/1:0,0:3:3.01:172,3,0	1/1:0,0:7:9.03:513,9,0	0/0:14,0:14:38.58:0,39,961	1/1:0,0:21:26.34:69,26,0	0/0:8,0:8:21.07:0,21,748
chr10	82626133	.	CCTGTCTGTCTGTCTGTCTGT	C	3676.96	PASS	AB=0.937;AC=35;AF=0.700;AN=50;BaseQRankSum=-1.745;DP=459;FS=3.571;HRun=0;HaplotypeScore=240.0256;InbreedingCoeff=0.1759;MQ=48.55;MQ0=11;MQRankSum=-1.788;QD=11.98;ReadPosRankSum=0.073;VQSLOD=2.5316;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:19:99:256,0,290	1/1:7,0:7:5.99:50,6,0	0/0:33,0:18:24.10:0,24,889	0/0:26,0:23:48.16:0,48,1681	1/1:11,0:10:3:25,3,0	1/1:10,0:10:6.02:140,6,0	1/1:10,0:10:12:208,12,0	1/1:10,10:19:30.06:392,30,0	1/1:7,0:7:6.02:165,6,0	0/1:12,0:10:8.94:278,0,9	./.	1/1:16,0:16:3.01:72,3,0	1/1:17,1:18:18.05:429,18,0	1/1:14,0:14:8.99:77,9,0	0/1:13,3:17:51.36:93,0,51	1/1:16,0:15:9.02:129,9,0	0/1:7,0:9:7.98:128,0,8	1/1:5,0:5:3.01:40,3,0	0/1:17,0:13:99:191,0,268	0/1:29,0:29:99:483,0,683	./.	1/1:6,0:7:6.01:63,6,0	1/1:5,0:5:3:25,3,0	1/1:14,0:14:0.47:1,0,0	./.	0/0:47,0:44:99:0,114,3812	0/1:36,0:34:99:433,0,1165	0/0:20,0:20:33.07:0,33,839
chr10	82626156	.	GTCTGTCTA	G	2092.59	PASS	AB=1.000;AC=22;AF=0.423;AN=52;BaseQRankSum=-2.461;DP=363;FS=0.655;HRun=0;HaplotypeScore=130.0920;InbreedingCoeff=0.0618;MQ=39.55;MQ0=26;MQRankSum=3.166;QD=8.98;ReadPosRankSum=3.281;VQSLOD=2.4941;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:14:32.37:81,0,32	./.	0/0:17,0:6:14.97:0,15,127	0/0:16,0:11:26.61:0,27,225	0/0:9,0:7:0:0,0,0	1/1:13,0:11:2.94:18,3,0	1/1:6,0:4:2.94:18,3,0	0/0:21,0:16:17.79:0,18,119	0/1:10,0:6:12.04:12,0,12	0/0:8,0:7:14.81:0,15,99	0/0:7,0:6:3:0,3,25	0/0:15,0:12:2.94:0,3,18	0/1:18,0:16:33.70:34,0,52	1/1:8,0:7:2.92:17,3,0	0/1:18,0:16:22.68:58,0,23	0/0:12,0:10:11.34:0,11,71	0/1:7,0:5:10.98:33,0,11	1/1:4,0:4:2.96:19,3,0	0/1:9,0:5:10.97:11,0,180	0/1:24,0:22:41.96:42,0,405	./.	0/1:9,0:9:9.07:9,0,34	0/0:8,0:8:5.99:0,6,50	0/1:12,0:12:0:0,0,0	0/0:14,0:11:3:0,3,26	1/1:1,38:36:99:1499,108,0	0/1:23,0:18:50.85:51,0,687	1/1:0,15:15:15:344,15,0
chr10	82626228	.	GTCTA	G	4607.33	PASS	AB=0.881;AC=19;AF=0.365;AN=52;BaseQRankSum=4.047;DP=1027;FS=5.876;HRun=0;HaplotypeScore=251.4699;InbreedingCoeff=-0.4121;MQ=39.03;MQ0=127;MQRankSum=-1.104;QD=6.72;ReadPosRankSum=-0.088;VQSLOD=3.2477;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:33:42.62:0,43,857	0/1:8,0:9:99:169,0,121	./.	./.	0/1:42,4:42:99:198,0,458	0/1:30,6:31:86.26:86,0,937	1/1:19,5:17:12.04:187,12,0	0/0:80,0:60:16.75:0,17,689	0/0:35,3:30:22.43:0,22,1474	0/1:54,4:51:99:277,0,1309	0/1:30,7:33:99:251,0,386	0/1:43,4:40:68.25:68,0,1284	0/1:37,5:35:99:500,0,502	0/1:22,1:19:99:226,0,652	0/1:50,8:50:99:627,0,1268	0/1:45,5:42:99:148,0,1775	0/1:28,3:26:98.67:99,0,710	0/0:22,0:15:36.12:0,36,802	0/1:21,4:17:99:130,0,393	0/1:33,11:40:99:466,0,1228	0/0:25,0:24:21.04:0,21,368	0/1:39,2:39:99:324,0,379	0/1:25,1:28:8.30:8,0,660	0/0:31,0:29:29.89:0,30,691	0/1:31,14:41:99:434,0,1036	0/0:37,0:34:63.22:0,63,1431	0/1:22,16:33:99:408,0,614	0/0:14,0:12:24.08:0,24,541
chr10	82626269	.	TCTAA	T	3716.29	PASS	AB=0.884;AC=16;AF=0.308;AN=52;BaseQRankSum=5.052;DP=827;FS=5.001;HRun=0;HaplotypeScore=209.2726;InbreedingCoeff=-0.4541;MQ=43.11;MQ0=94;MQRankSum=-0.341;QD=7.77;ReadPosRankSum=3.094;VQSLOD=2.5780;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:38:63.44:0,63,971	0/1:5,4:9:99:231,0,176	./.	./.	0/1:24,10:30:99:300,0,555	0/1:24,0:23:9.39:9,0,871	0/1:17,0:13:59.13:59,0,81	0/0:55,0:25:65.16:0,65,1044	0/0:32,0:28:47.39:0,47,1398	0/1:37,5:32:99:311,0,1502	0/1:18,9:23:99:260,0,472	0/0:32,0:31:3.52:0,4,1261	0/1:19,10:24:99:538,0,595	0/1:11,7:18:99:342,0,774	0/1:35,10:44:99:662,0,1598	0/1:37,0:33:51.82:52,0,1656	0/1:23,0:20:28.92:29,0,752	0/0:18,0:14:36.12:0,36,956	0/1:18,0:11:26.58:27,0,356	0/1:49,1:48:99:187,0,1503	0/0:13,7:16:21.51:0,22,478	0/1:21,9:27:99:371,0,489	0/0:24,0:21:15.02:0,15,578	0/0:26,0:25:36.96:0,37,780	0/1:37,0:35:99:190,0,1082	0/0:42,0:37:99:0,111,2173	0/1:38,0:36:99:149,0,761	0/0:14,0:12:30.07:0,30,724
chr10	82626310	.	C	CGTCT	873.20	PASS	AB=0.875;AC=5;AF=0.156;AN=32;BaseQRankSum=-1.497;DP=425;FS=1.071;HRun=0;HaplotypeScore=93.3263;InbreedingCoeff=0.6289;MQ=54.60;MQ0=37;MQRankSum=1.497;QD=14.80;ReadPosRankSum=0.098;VQSLOD=2.8422;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,25:40:38.93:958,39,0	0/0:2,0:2:1.25:0,1,3	0/0:36,0:20:29.97:0,30,289	0/0:23,0:13:20.87:0,21,227	./.	./.	0/0:21,0:19:44.04:0,44,579	0/0:60,0:50:98.05:0,98,1054	./.	./.	1/1:7,0:5:2.33:9,2,0	./.	./.	./.	./.	./.	./.	./.	0/0:14,0:8:11.73:0,12,169	0/0:34,0:34:69.11:0,69,907	0/0:6,0:5:0:0,0,0	0/0:8,0:7:2.13:0,2,5	0/0:1,0:1:3:0,3,28	0/1:6,0:7:0:0,0,0	./.	0/0:44,0:40:86.88:0,87,1192	0/0:39,0:33:62.80:0,63,794	0/0:10,0:10:18.06:0,18,288
chr10	82626373	.	CT	C	2596.38	PASS	AB=0.586;AC=18;AF=0.346;AN=52;BaseQRankSum=6.453;DP=450;FS=9.142;HRun=1;HaplotypeScore=115.0079;InbreedingCoeff=0.0487;MQ=36.71;MQ0=56;MQRankSum=-2.171;QD=15.74;ReadPosRankSum=-1.495;VQSLOD=2.5695;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:25:39.13:0,39,608	0/1:1,6:6:26.80:114,0,27	0/0:21,0:1:3.01:0,3,48	0/0:15,0:1:3.01:0,3,41	1/1:1,11:11:12.78:171,13,0	0/0:5,0:4:9.03:0,9,120	0/0:17,0:14:33.11:0,33,490	./.	0/0:6,0:5:12.04:0,12,152	0/1:6,11:12:99:296,0,130	0/1:3,3:5:1.53:2,0,75	0/1:4,14:11:11.85:273,0,12	1/1:1,11:9:18.06:251,18,0	0/1:1,10:9:10.66:302,0,11	0/1:6,12:16:85.57:376,0,86	0/1:2,14:13:41.83:337,0,42	0/1:3,5:4:35.47:100,0,35	1/1:1,3:1:3.01:42,3,0	0/0:12,0:3:9.03:0,9,144	0/0:26,0:22:49.70:0,50,742	0/0:7,5:7:5.89:0,6,83	0/1:3,9:12:87.88:267,0,88	0/1:8,10:17:99:147,0,99	./.	1/1:1,5:6:4.46:82,4,0	0/0:42,0:36:99:0,108,1725	0/0:18,0:15:36.10:0,36,550	0/0:29,0:28:81.28:0,81,1294
chr10	82626376	.	CCTATCTATCTAT	C	2326.36	PASS	AB=0.855;AC=18;AF=0.360;AN=50;BaseQRankSum=2.013;DP=461;FS=56.515;HRun=0;HaplotypeScore=170.9725;InbreedingCoeff=0.0996;MQ=36.41;MQ0=57;MQRankSum=-6.885;QD=14.01;ReadPosRankSum=-0.061;VQSLOD=1.1174;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:27:23.87:0,24,890	0/1:6,1:6:87.41:87,0,249	./.	./.	0/0:12,1:11:8.64:0,9,299	1/1:2,4:4:9.03:298,9,0	0/0:15,0:12:15.05:0,15,585	./.	1/1:4,4:6:12.04:409,12,0	0/1:15,4:12:99:373,0,536	1/1:4,2:5:11.68:198,12,0	0/1:17,2:12:88.40:88,0,592	0/0:12,1:10:23.98:0,24,567	0/1:10,1:9:75.26:75,0,623	0/1:14,4:17:99:301,0,803	0/1:15,2:14:99:172,0,706	0/0:9,0:4:0.83:0,1,188	0/0:4,0:1:3.01:0,3,93	0/0:10,0:4:3.01:0,3,66	0/0:25,0:21:16.72:0,17,751	1/1:12,0:8:4.26:42,4,0	0/1:12,3:13:99:186,0,576	0/1:15,3:17:99:250,0,338	1/1:5,0:3:1.25:3,1,0	0/0:6,0:6:9.12:0,9,200	0/0:41,0:35:36.12:0,36,1951	0/0:19,0:16:5.85:0,6,131	0/0:28,0:28:66.23:0,66,3649
chr10	82626463	.	GTCTATCTATCTATCTA	G	650.62	PASS	AB=0.975;AC=11;AF=0.220;AN=50;BaseQRankSum=1.347;DP=724;FS=7.791;HRun=0;HaplotypeScore=254.6074;InbreedingCoeff=0.0420;MQ=33.86;MQ0=125;MQRankSum=-2.125;QD=2.82;ReadPosRankSum=-1.303;VQSLOD=1.2878;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:36:36.12:0,36,2073	0/0:7,0:4:3.01:0,3,63	./.	./.	0/1:24,0:16:66.52:67,0,306	0/0:14,0:12:3.01:0,3,50	0/0:31,0:20:17.73:0,18,1125	0/0:56,0:25:12.02:0,12,200	0/0:33,3:24:18.06:0,18,1049	0/1:42,0:31:14.77:15,0,451	0/1:16,0:8:8.29:8,0,48	0/1:26,1:18:99:218,0,210	0/0:25,1:20:5.81:0,6,167	1/1:18,1:15:4.26:99,4,0	1/1:34,3:31:4.26:134,4,0	0/1:28,1:26:99:119,0,257	0/1:21,1:17:99:122,0,147	0/0:17,0:11:19.81:0,20,381	0/0:19,0:10:12.02:0,12,487	0/0:40,0:34:11.83:0,12,634	0/0:26,0:19:10.74:0,11,552	0/0:21,0:18:3.93:0,4,178	0/0:22,0:19:2.58:0,3,78	0/1:14,0:12:0:0,0,0	0/0:22,1:16:12.04:0,12,310	0/0:15,0:9:8.99:0,9,137	0/0:33,0:23:3.01:0,3,50	./.
chr10	82626512	.	TCTATCTAA	T	737.88	PASS	AB=1.000;AC=8;AF=0.154;AN=52;BaseQRankSum=-5.031;DP=532;FS=0.613;HRun=0;HaplotypeScore=155.7636;InbreedingCoeff=0.2500;MQ=40.98;MQ0=84;MQRankSum=-1.303;QD=4.61;ReadPosRankSum=1.013;VQSLOD=2.7615;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:28:99:203,0,1021	0/0:5,0:5:12:0,12,104	./.	./.	0/0:13,0:10:23.94:0,24,203	0/0:11,0:9:20.95:0,21,176	0/0:12,13:18:17.66:0,18,530	1/1:48,0:11:9.94:219,10,0	0/0:31,0:24:65.80:0,66,825	0/0:19,0:15:41.93:0,42,375	0/0:13,0:11:32.50:0,33,268	0/0:26,0:17:5.70:0,6,295	0/0:15,0:11:26.79:0,27,205	0/0:16,0:13:20.87:0,21,165	0/0:25,0:21:10.51:0,11,300	0/0:26,0:22:16.77:0,17,410	0/1:13,0:10:20.98:32,0,21	0/0:14,0:11:11.48:0,11,247	0/1:15,0:10:99:150,0,123	0/1:22,0:21:99:246,0,247	0/0:24,0:16:20.97:0,21,258	0/0:11,0:9:23.89:0,24,198	0/0:6,0:5:14.94:0,15,121	0/0:14,0:9:9:0,9,81	0/0:17,0:13:38.85:0,39,318	0/0:22,0:17:51.01:0,51,459	1/1:28,0:23:2.59:18,3,0	0/0:3,0:2:5.94:0,6,41
chr10	82626557	.	C	CGTCT	8537.57	PASS	AB=0.966;AC=38;AF=0.679;AN=56;BaseQRankSum=6.170;DP=657;FS=17.619;HRun=0;HaplotypeScore=197.3053;InbreedingCoeff=0.6969;MQ=46.24;MQ0=27;MQRankSum=-0.734;QD=18.09;ReadPosRankSum=2.557;VQSLOD=2.9156;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:68.78:0,69,765	1/1:9,2:11:29:286,29,0	0/0:23,0:14:29.48:0,29,321	0/0:26,0:20:57.05:0,57,551	1/1:21,4:23:33.89:410,34,0	1/1:12,7:18:9.81:363,10,0	0/0:21,0:18:23.84:0,24,317	0/0:39,0:27:71.73:0,72,602	1/1:26,5:25:44.08:666,44,0	1/1:29,5:30:77.80:940,78,0	0/1:16,3:17:3.62:210,0,4	1/1:29,10:30:55.97:817,56,0	1/1:15,6:18:21.91:533,22,0	1/1:16,2:15:24.02:353,24,0	1/1:32,8:35:53:716,53,0	1/1:26,8:31:71.96:1071,72,0	1/1:13,3:13:15.03:248,15,0	1/1:10,1:9:21.19:241,21,0	0/0:16,0:12:28.81:0,29,241	0/0:24,0:23:45.25:0,45,343	1/1:15,0:11:8.67:112,9,0	1/1:15,2:15:26.01:288,26,0	1/1:16,5:19:10.78:190,11,0	1/1:11,2:8:15.01:171,15,0	1/1:19,5:22:32.89:489,33,0	0/1:31,0:30:99:351,0,331	0/1:28,0:24:1.59:58,0,2	0/1:5,0:4:24.43:24,0,30
chr10	82626562	.	G	GTCTATCTA	10500.57	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=1.078;DP=692;FS=4.289;HRun=0;HaplotypeScore=247.2424;InbreedingCoeff=0.4791;MQ=46.95;MQ0=18;MQRankSum=-2.751;QD=17.83;ReadPosRankSum=0.811;VQSLOD=3.6033;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:38.20:0,38,559	1/1:11,0:11:12.03:242,12,0	0/0:24,0:15:2.14:0,2,20	0/0:26,0:21:2.99:0,3,23	1/1:26,0:24:11.95:240,12,0	1/1:23,0:22:9.03:254,9,0	0/0:20,0:17:13.86:0,14,291	1/1:36,0:29:6.01:67,6,0	1/1:30,0:26:27.02:550,27,0	1/1:34,0:31:45.09:908,45,0	1/1:18,0:17:5.98:47,6,0	1/1:40,0:31:39.10:1050,39,0	1/1:21,0:18:24.03:667,24,0	0/1:20,0:18:3.95:388,0,4	1/1:41,0:37:36.05:810,36,0	1/1:36,0:33:48.18:1079,48,0	1/1:16,0:13:18.01:351,18,0	0/1:11,0:9:3.74:212,0,4	1/1:21,0:16:15.02:319,15,0	1/1:32,0:31:12.01:164,12,0	1/1:17,0:13:5.49:92,5,0	1/1:19,0:17:8.99:157,9,0	0/1:22,0:20:12.09:65,0,12	1/1:14,0:10:9.01:187,9,0	1/1:26,0:24:18.02:307,18,0	1/1:16,15:35:57.10:1568,57,0	1/1:32,0:31:35.90:655,36,0	1/1:3,2:6:3.01:123,3,0
chr10	82626597	.	T	TATCC	12487.17	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=7.088;DP=739;FS=8.292;HRun=0;HaplotypeScore=217.1281;InbreedingCoeff=0.7475;MQ=64.28;MQ0=4;MQRankSum=-6.390;QD=22.91;ReadPosRankSum=-0.213;VQSLOD=3.6256;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:87.35:0,87,883	1/1:7,3:8:22.96:273,23,0	0/0:22,0:18:35.01:0,35,368	0/0:29,0:23:38.83:0,39,397	1/1:29,4:33:46.31:536,46,0	1/1:2,8:24:15.14:200,15,0	0/0:19,0:18:47.75:0,48,476	0/0:28,0:26:60.94:0,61,538	1/1:21,4:23:55.78:636,56,0	1/1:35,5:40:99:1598,102,0	1/1:19,3:22:46.17:449,46,0	1/1:25,9:30:74:1129,74,0	1/1:19,7:26:64.93:854,65,0	1/1:17,2:17:39.01:552,39,0	1/1:36,7:40:99:1252,101,0	1/1:30,6:36:86.80:1193,87,0	1/1:19,2:20:44.89:608,45,0	1/1:14,1:14:26.72:378,27,0	0/0:23,0:21:41.60:0,42,360	0/0:33,0:32:55.82:0,56,419	1/1:21,0:19:41.88:424,42,0	1/1:25,2:26:46.74:509,47,0	1/1:26,5:31:53.97:519,54,0	1/1:12,2:13:32.93:432,33,0	1/1:21,4:25:51.47:528,51,0	0/1:39,0:38:99:385,0,350	0/1:32,0:30:15.75:16,0,274	0/1:8,0:8:18.27:18,0,80
chr10	82627654	.	CT	C	2473.56	PASS	AB=0.774;AC=34;AF=0.607;AN=56;BaseQRankSum=-2.411;DP=585;FS=12.614;HRun=15;HaplotypeScore=78.4332;InbreedingCoeff=0.5171;MQ=65.90;MQ0=0;MQRankSum=-2.278;QD=6.20;ReadPosRankSum=4.059;VQSLOD=1.3772;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,1:37:20.98:0,21,189	1/1:1,3:4:5.91:38,6,0	0/0:21,0:11:14.52:0,15,107	0/0:18,0:13:10.38:0,10,66	0/1:13,7:22:25.84:62,0,26	0/1:9,14:24:9.46:192,0,9	0/0:13,0:20:41.82:0,42,258	0/0:11,0:29:49.22:0,49,273	1/1:11,6:18:13.47:179,13,0	1/1:5,14:20:28.40:177,28,0	1/1:3,4:8:16.78:101,17,0	1/1:11,13:24:41.14:266,41,0	1/1:11,11:24:24.55:146,25,0	1/1:15,4:19:28.84:178,29,0	1/1:16,9:27:6.13:155,6,0	1/1:16,14:31:22.85:265,23,0	1/1:17,11:30:37.17:238,37,0	0/1:12,14:29:35.93:151,0,36	0/0:4,0:18:20:0,20,143	0/0:10,0:19:21.53:0,22,144	1/1:5,10:16:29.04:193,29,0	0/1:12,0:13:15.35:15,0,38	1/1:7,12:19:8.77:58,9,0	1/1:11,8:19:4.88:150,5,0	1/1:11,8:19:14.58:95,15,0	0/1:19,2:22:1.45:1,0,210	0/0:9,0:23:6.41:0,6,102	0/1:9,2:11:9.18:9,0,158
chr10	82628137	.	C	CG	421.27	PASS	AB=0.794;AC=18;AF=0.692;AN=26;BaseQRankSum=-0.520;DP=41;FS=0.000;HRun=1;HaplotypeScore=43.6120;InbreedingCoeff=0.1250;MQ=84.30;MQ0=0;MQRankSum=-0.520;QD=15.05;ReadPosRankSum=2.126;VQSLOD=3.2116;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:3.01:37,3,0	0/0:1,0:1:0:0,0,0	./.	./.	./.	./.	1/1:0,1:1:3.01:39,3,0	1/1:0,3:3:6.02:83,6,0	./.	./.	./.	./.	./.	./.	./.	./.	0/1:2,0:2:0.94:22,0,1	1/1:0,1:1:3.01:38,3,0	1/1:0,1:1:3.01:41,3,0	1/1:0,1:1:3.01:40,3,0	0/1:3,7:10:7:36,0,7	0/0:3,1:4:1.55:0,2,4	0/0:1,1:2:1.55:0,2,4	1/1:0,4:4:6.01:77,6,0	./.	1/1:4,0:4:11.92:88,12,0	./.	./.
chr10	82628140	.	G	GC	490.57	PASS	AB=1.000;AC=19;AF=0.731;AN=26;BaseQRankSum=0.237;DP=28;FS=7.656;HRun=1;HaplotypeScore=27.3937;InbreedingCoeff=0.3183;MQ=73.27;MQ0=0;MQRankSum=-1.777;QD=21.33;ReadPosRankSum=2.488;VQSLOD=3.3036;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:3.01:40,3,0	0/1:1,0:1:0:0,0,0	./.	0/0:2,0:1:3:0,3,27	./.	./.	1/1:0,1:1:3.01:42,3,0	1/1:1,2:3:6.02:90,6,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:41,3,0	1/1:0,1:1:3.01:45,3,0	1/1:0,1:1:3.01:43,3,0	1/1:0,7:7:8.49:71,8,0	0/0:0,1:1:1.55:0,2,4	0/0:0,1:1:1.55:0,2,4	1/1:0,4:4:5.81:83,6,0	./.	1/1:0,3:3:9.03:123,9,0	./.	./.
chr10	82628143	.	G	GC	161.46	PASS	AB=0.833;AC=15;AF=0.536;AN=28;BaseQRankSum=1.776;DP=29;FS=2.757;HRun=3;HaplotypeScore=31.7656;InbreedingCoeff=0.3716;MQ=72.20;MQ0=0;MQRankSum=-1.041;QD=7.02;ReadPosRankSum=2.633;VQSLOD=0.8088;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:1,0:1:0:0,0,0	1/1:0,1:1:2.97:20,3,0	0/0:1,0:1:3.01:0,3,35	0/0:2,0:1:3.01:0,3,30	./.	./.	1/1:0,1:1:3.01:30,3,0	0/1:3,0:3:0:0,0,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:34,3,0	0/0:1,0:1:0.89:0,1,2	0/1:0,1:1:0:0,0,0	1/1:3,5:8:6.35:46,6,0	0/0:0,1:1:1.55:0,2,4	0/0:0,1:1:1.55:0,2,4	1/1:1,3:4:5.80:60,6,0	./.	1/1:1,2:3:6.01:61,6,0	./.	./.
chr10	82628147	.	G	GC	259.09	PASS	AB=0.500;AC=16;AF=0.667;AN=24;BaseQRankSum=1.868;DP=27;FS=2.622;HRun=3;HaplotypeScore=33.9221;InbreedingCoeff=0.3534;MQ=75.35;MQ0=0;MQRankSum=-1.246;QD=11.26;ReadPosRankSum=1.246;VQSLOD=1.7331;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/1:0,1:1:0:0,0,0	0/0:1,0:1:3.01:0,3,37	0/0:2,0:1:2.99:0,3,23	./.	./.	1/1:0,1:1:3.01:41,3,0	1/1:2,0:2:3:27,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:39,3,0	./.	0/1:0,1:1:0:0,0,0	1/1:4,6:10:8.70:94,9,0	1/1:0,1:1:2.90:16,3,0	0/0:0,1:1:1.55:0,2,4	1/1:1,3:4:5.81:80,6,0	./.	1/1:0,2:2:5.81:51,6,0	./.	./.
chr10	82628162	.	T	TA	721.85	PASS	AC=20;AF=0.833;AN=24;BaseQRankSum=-2.329;DP=38;FS=0.000;HRun=0;HaplotypeScore=31.1304;InbreedingCoeff=0.2769;MQ=80.91;MQ0=0;MQRankSum=-1.799;QD=21.87;ReadPosRankSum=0.000;VQSLOD=4.4069;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:3.01:47,3,0	./.	0/0:2,0:2:3.01:0,3,31	0/0:1,0:1:3.01:0,3,35	./.	./.	1/1:0,2:2:3.01:48,3,0	1/1:0,1:1:3.01:48,3,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,2:2:3.01:48,3,0	1/1:0,1:1:3.01:48,3,0	./.	./.	1/1:0,13:13:11.47:191,11,0	1/1:0,5:5:6.02:96,6,0	1/1:0,2:2:6.02:96,6,0	1/1:0,4:4:5.81:95,6,0	./.	1/1:0,2:2:6.02:96,6,0	./.	./.
chr10	82629852	.	CT	C	9133.73	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=12.895;DP=641;FS=16.574;HRun=9;HaplotypeScore=62.1805;InbreedingCoeff=0.9957;MQ=71.47;MQ0=0;MQRankSum=-1.789;QD=22.89;ReadPosRankSum=5.507;VQSLOD=3.7668;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.15:0,57,643	1/1:0,10:10:30.02:275,30,0	0/0:18,0:17:32.47:0,32,303	0/0:8,0:7:14.88:0,15,150	1/1:3,38:41:99:955,105,0	1/1:5,38:43:99:988,108,0	0/0:23,0:23:66.20:0,66,761	0/0:37,0:37:99:0,99,1112	1/1:0,26:26:63.03:577,63,0	1/1:2,25:27:75.01:677,75,0	1/1:1,21:23:62.04:548,62,0	1/1:1,16:17:42.02:384,42,0	1/1:2,19:21:51.02:467,51,0	1/1:2,17:19:51.02:467,51,0	1/1:2,18:20:48.02:439,48,0	1/1:2,20:22:54.02:494,54,0	1/1:3,18:21:48.02:439,48,0	1/1:0,11:12:32.05:281,32,0	0/0:25,0:25:66.19:0,66,753	0/0:31,1:32:50.75:0,51,813	1/1:0,19:19:45.02:412,45,0	1/1:2,11:13:33.02:302,33,0	1/1:2,20:22:53.90:494,54,0	1/1:4,20:24:54.02:494,54,0	1/1:2,17:19:48.01:439,48,0	0/0:31,3:34:16.89:0,17,956	0/0:30,0:30:87.26:0,87,1003	0/0:14,0:14:33.10:0,33,380
chr10	82631052	.	G	GTGTA	4869.57	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-8.792;DP=520;FS=1.511;HRun=0;HaplotypeScore=99.9811;InbreedingCoeff=0.9967;MQ=64.96;MQ0=4;MQRankSum=-4.148;QD=38.34;ReadPosRankSum=-1.573;VQSLOD=4.6232;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,17:29:27.70:810,28,0	0/0:9,0:9:27.08:0,27,471	0/0:24,0:20:45.32:0,45,673	0/0:28,0:19:47.95:0,48,756	0/0:17,0:17:48.05:0,48,781	0/0:23,0:22:63.06:0,63,918	1/1:4,12:19:16.30:391,16,0	1/1:2,23:26:71.83:1079,72,0	0/0:11,0:11:33.10:0,33,560	0/0:24,0:24:72.22:0,72,1257	0/0:24,0:24:69.20:0,69,1198	0/0:20,0:20:60.13:0,60,958	0/0:15,0:15:42.11:0,42,711	0/0:14,0:14:42.10:0,42,686	0/0:16,0:16:48.11:0,48,768	0/0:15,0:15:39.13:0,39,697	0/0:16,0:16:41.22:0,41,748	0/0:19,0:19:44.35:0,44,804	1/1:3,16:19:54.03:926,54,0	1/1:1,17:19:36.12:947,36,0	0/0:16,0:15:45.14:0,45,805	0/0:16,0:16:45.11:0,45,742	0/0:24,0:24:63.17:0,63,1066	0/0:12,0:12:30.07:0,30,494	0/0:14,0:14:39.12:0,39,694	0/0:20,0:20:57.16:0,57,956	1/1:2,11:13:27.09:716,27,0	0/0:14,0:13:36.10:0,36,619
chr10	82632026	.	C	CA	5763.89	PASS	AB=0.815;AC=38;AF=0.679;AN=56;BaseQRankSum=-6.866;DP=570;FS=18.146;HRun=12;HaplotypeScore=64.2219;InbreedingCoeff=0.3631;MQ=63.70;MQ0=8;MQRankSum=1.826;QD=13.31;ReadPosRankSum=2.933;VQSLOD=3.2755;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:41:97.29:0,97,680	1/1:1,6:7:15.02:146,15,0	0/1:11,0:6:5.41:5,0,17	0/1:14,0:12:12.04:12,0,34	1/1:7,15:22:14.07:287,14,0	1/1:5,13:18:20.23:357,20,0	0/1:21,2:23:7.62:8,0,276	0/0:24,0:23:55.60:0,56,392	1/1:6,13:20:19.83:328,20,0	1/1:10,10:20:14.05:279,14,0	1/1:6,17:25:0.88:448,1,0	1/1:5,15:20:20.11:346,20,0	1/1:4,14:18:7.66:240,8,0	1/1:5,15:20:38.90:379,39,0	1/1:5,24:30:38.20:518,38,0	1/1:1,9:11:24.04:234,24,0	0/1:5,14:20:1.86:293,0,2	0/1:12,11:22:48.39:290,0,48	0/1:23,1:24:18.56:19,0,235	0/0:18,0:19:37.72:0,38,266	0/1:5,18:24:28.28:340,0,28	1/1:4,12:15:20.15:355,20,0	1/1:3,13:19:25.79:376,26,0	1/1:3,13:16:36.06:350,36,0	1/1:2,8:8:12.02:117,12,0	0/0:26,1:28:36.09:0,36,411	0/1:15,4:20:37.89:38,0,233	0/0:20,1:21:23.56:0,24,327
chr10	82632627	.	GTCA	G	66.56	PASS	AB=0.951;AC=6;AF=0.107;AN=56;BaseQRankSum=3.404;DP=463;FS=6.179;HRun=0;HaplotypeScore=98.8374;InbreedingCoeff=-0.1253;MQ=73.72;MQ0=10;MQRankSum=-2.428;QD=0.68;ReadPosRankSum=-6.843;VQSLOD=-0.3623;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:33:0.34:0,0,368	0/0:4,0:4:2.06:0,2,110	0/0:42,0:29:82.67:0,83,1657	0/0:32,0:20:59.98:0,60,1133	0/0:11,0:11:21.03:0,21,367	0/0:21,0:21:32.63:0,33,789	0/0:19,0:19:16.43:0,16,311	0/0:30,0:30:67.49:0,67,579	0/1:12,0:10:18.23:18,0,441	0/1:9,4:13:82.78:83,0,360	0/0:10,0:9:8.98:0,9,113	0/0:14,0:13:36.10:0,36,710	0/0:16,0:16:38.66:0,39,770	0/0:11,0:11:24.08:0,24,469	0/0:11,0:11:26.92:0,27,487	0/0:17,0:17:44.60:0,45,729	0/0:20,0:19:34.47:0,34,690	0/1:15,1:16:13.51:14,0,877	0/1:14,0:14:4.25:4,0,233	0/0:12,0:12:11.70:0,12,83	0/0:19,0:17:7.16:0,7,560	0/1:6,0:6:56.68:57,0,171	0/0:7,0:6:12.04:0,12,246	0/0:17,0:16:18.95:0,19,357	0/0:10,0:10:8.01:0,8,324	0/0:14,0:14:36.10:0,36,649	0/0:19,0:19:10.82:0,11,459	0/0:9,0:9:27.03:0,27,411
chr10	82632629	.	C	CGTGT	1408.46	PASS	AB=0.985;AC=24;AF=0.429;AN=56;BaseQRankSum=8.420;DP=458;FS=15.579;HRun=0;HaplotypeScore=113.8493;InbreedingCoeff=-0.4584;MQ=73.25;MQ0=13;MQRankSum=-4.396;QD=4.19;ReadPosRankSum=-4.003;VQSLOD=-0.1863;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:27:15:234,15,0	0/1:5,0:5:33.15:33,0,39	0/0:40,0:27:77.24:0,77,1068	0/0:34,0:20:38.16:0,38,852	0/1:11,0:11:2.98:3,0,175	0/1:20,0:20:20.24:20,0,442	0/1:19,0:20:14.12:34,0,14	0/1:25,0:25:23.74:74,0,24	0/1:12,0:10:54.85:55,0,244	0/1:12,0:12:99:117,0,177	0/0:11,0:10:3.01:0,3,49	0/0:15,0:14:11.53:0,12,409	0/1:16,0:16:15.51:16,0,318	0/1:12,0:11:17.23:17,0,226	0/1:11,0:11:99:100,0,170	0/1:17,0:17:99:105,0,259	0/1:20,0:19:14.61:15,0,348	0/1:17,0:17:44.10:44,0,450	0/1:12,0:12:16.69:45,0,17	1/1:9,3:17:8.51:172,9,0	0/1:20,0:18:24.45:24,0,356	0/1:8,0:8:99:106,0,117	0/1:8,0:7:18.36:18,0,86	0/1:17,0:16:27.57:28,0,159	0/1:8,0:8:15.74:16,0,200	0/0:13,0:13:33.10:0,33,569	0/1:11,5:17:13.20:295,0,13	0/0:9,0:9:27.07:0,27,433
chr10	82632630	.	A	ATGTGTG	5510.82	PASS	AB=0.893;AC=49;AF=0.907;AN=54;BaseQRankSum=-3.428;DP=569;FS=12.386;HRun=0;HaplotypeScore=159.7505;InbreedingCoeff=0.3146;MQ=67.69;MQ0=13;MQRankSum=-3.393;QD=10.60;ReadPosRankSum=-2.473;VQSLOD=2.5017;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:35:8.60:184,9,0	1/1:2,3:6:6.02:135,6,0	./.	0/1:35,0:20:0:0,0,0	1/1:12,3:19:1.89:36,2,0	1/1:19,2:25:8.99:231,9,0	1/1:28,0:28:10.24:336,10,0	1/1:26,0:26:18.02:266,18,0	1/1:9,5:13:9.03:272,9,0	1/1:13,0:13:21.96:449,22,0	0/1:9,3:16:0:0,0,0	1/1:14,3:18:3.01:97,3,0	1/1:16,4:22:11.70:327,12,0	1/1:10,4:14:5.96:193,6,0	1/1:6,4:13:12.04:328,12,0	1/1:8,7:20:21.03:599,21,0	1/1:15,0:24:9.50:175,10,0	1/1:20,0:19:18.01:321,18,0	1/1:15,0:15:12.04:284,12,0	1/1:22,0:22:9.02:144,9,0	1/1:23,0:21:5.99:119,6,0	1/1:14,0:14:6.01:169,6,0	1/1:12,4:16:5.98:120,6,0	1/1:10,6:19:9.50:233,10,0	1/1:10,4:18:5.87:189,6,0	0/1:10,0:14:63.43:63,0,149	1/1:19,0:19:17.05:239,17,0	0/0:4,0:9:15.05:0,15,210
chr10	82634927	.	GA	G	3779.52	PASS	AB=0.663;AC=44;AF=0.815;AN=54;BaseQRankSum=2.579;DP=461;FS=26.761;HRun=14;HaplotypeScore=56.0900;InbreedingCoeff=0.1116;MQ=51.29;MQ0=29;MQRankSum=0.931;QD=8.73;ReadPosRankSum=0.593;VQSLOD=0.6209;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:25,1:25:54.86:361,55,0	1/1:3,7:11:19.83:127,20,0	./.	0/0:9,0:2:2.80:0,3,8	0/1:7,14:21:13.69:164,0,14	1/1:7,17:24:16.69:257,17,0	1/1:14,3:15:31.45:209,31,0	1/1:12,6:17:14.90:162,15,0	0/1:4,8:12:13.05:67,0,13	1/1:6,9:14:23.74:164,24,0	1/1:9,10:20:25.18:157,25,0	0/1:6,8:14:29.48:105,0,29	1/1:3,5:8:2.93:20,3,0	1/1:3,13:16:2.61:158,3,0	0/1:4,14:18:7.72:170,0,8	1/1:6,14:20:6.92:184,7,0	1/1:13,17:24:50.55:349,51,0	0/1:9,9:18:11.04:67,0,11	1/1:9,2:9:20.52:134,21,0	1/1:14,5:16:23.29:154,23,0	1/1:4,3:5:5.92:41,6,0	1/1:3,9:13:19.85:129,20,0	1/1:6,11:18:21.81:143,22,0	1/1:2,13:15:4.90:178,5,0	1/1:6,9:15:14.73:103,15,0	0/1:21,2:24:5.31:5,0,214	1/1:13,3:17:27.34:171,27,0	0/0:11,1:11:3.28:0,3,161
chr10	82634950	.	C	CA	3635.49	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-4.994;DP=545;FS=3.109;HRun=7;HaplotypeScore=68.2718;InbreedingCoeff=0.8789;MQ=59.66;MQ0=21;MQRankSum=-0.856;QD=23.92;ReadPosRankSum=-0.980;VQSLOD=3.5214;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,5:26:69.20:821,69,0	0/0:12,1:13:37.28:0,37,342	0/0:11,0:4:5.89:0,6,57	0/1:24,0:14:16.61:17,0,131	0/0:19,0:19:48.05:0,48,457	0/0:26,0:26:60.09:0,60,579	1/1:15,6:20:54.07:606,54,0	1/1:4,25:29:75.69:889,76,0	0/0:13,0:13:36.06:0,36,347	0/0:21,0:19:57.09:0,57,550	0/0:22,0:21:51.08:0,51,492	0/0:17,0:17:42.06:0,42,403	0/0:9,0:9:15.02:0,15,145	0/0:16,0:16:38.80:0,39,347	0/0:23,0:23:51.08:0,51,491	0/0:23,0:22:57.07:0,57,550	0/0:30,0:26:69.10:0,69,663	0/0:18,0:17:38.84:0,39,360	1/1:10,5:12:26.97:297,27,0	1/1:12,10:19:45.14:539,45,0	0/0:10,0:8:24.04:0,24,232	0/0:16,0:16:39.06:0,39,377	0/0:28,0:28:63.09:0,63,602	0/0:22,0:22:57.09:0,57,550	0/0:23,0:23:57.08:0,57,544	0/0:22,0:22:60.08:0,60,573	1/1:6,8:14:39.12:467,39,0	0/0:10,0:9:27.04:0,27,260
chr10	82637468	.	A	AGG	5798.11	PASS	AB=0.887;AC=38;AF=0.679;AN=56;BaseQRankSum=9.273;DP=616;FS=2.496;HRun=3;HaplotypeScore=110.3763;InbreedingCoeff=0.5886;MQ=67.31;MQ0=4;MQRankSum=-0.759;QD=12.72;ReadPosRankSum=-0.261;VQSLOD=1.6173;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:1.01:0,1,372	1/1:5,0:5:15.02:157,15,0	0/0:32,0:22:60.07:0,60,653	0/0:26,0:19:44.28:0,44,579	1/1:1,24:25:44.29:320,44,0	1/1:4,14:19:8.70:217,9,0	0/1:33,0:32:47.28:47,0,474	0/0:24,0:24:50.59:0,51,426	1/1:19,3:22:54.66:517,55,0	1/1:27,0:27:52.65:507,53,0	1/1:11,0:11:26.84:225,27,0	1/1:1,16:19:6.02:110,6,0	1/1:0,14:15:9.03:165,9,0	1/1:2,14:17:14.08:225,14,0	1/1:3,28:31:38.61:602,39,0	1/1:4,19:23:20.81:270,21,0	1/1:20,8:28:69.97:832,70,0	1/1:2,21:23:17.52:292,18,0	0/0:17,0:16:17.86:0,18,242	0/1:16,0:16:6.06:6,0,171	1/1:7,26:34:9.01:154,9,0	0/1:3,14:17:8.42:204,0,8	1/1:3,13:17:5.70:68,6,0	1/1:6,29:36:40.81:637,41,0	1/1:2,15:17:12.51:218,13,0	0/0:27,0:27:63:0,63,671	0/1:20,0:20:23.39:23,0,198	0/0:4,0:4:11.99:0,12,114
chr10	82637470	.	G	GGT	2565.87	PASS	AB=0.973;AC=36;AF=0.643;AN=56;BaseQRankSum=0.973;DP=652;FS=0.000;HRun=0;HaplotypeScore=143.3374;InbreedingCoeff=-0.0473;MQ=65.47;MQ0=5;MQRankSum=-0.712;QD=4.57;ReadPosRankSum=1.220;VQSLOD=2.9902;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:35,1:36:13.25:169,13,0	1/1:6,0:6:2.99:24,3,0	0/0:32,0:21:5.53:0,6,60	0/0:27,0:19:8.77:0,9,86	1/1:26,0:26:2.27:32,2,0	0/1:19,0:19:30.94:98,0,31	0/1:33,6:38:34.31:297,0,34	1/1:22,0:21:3.48:45,3,0	0/1:21,0:21:34.35:88,0,34	0/1:30,0:30:36.02:49,0,36	1/1:14,0:14:0.84:2,1,0	1/1:18,0:18:6.01:56,6,0	1/1:16,0:16:9.02:89,9,0	0/1:18,0:18:6.46:101,0,6	0/1:32,0:32:19.66:300,0,20	1/1:22,0:22:3.65:101,4,0	0/1:31,0:31:31.07:232,0,31	1/1:25,0:24:5.33:133,5,0	1/1:16,1:16:12.27:110,12,0	1/1:11,9:20:4.91:86,5,0	0/1:36,0:36:8.37:65,0,8	0/1:17,0:17:6.58:110,0,7	0/1:18,0:18:0.87:23,0,1	0/1:40,0:40:49.16:280,0,49	1/1:17,0:17:12.49:117,12,0	0/0:23,0:24:33.94:0,34,316	0/1:16,4:21:8.99:122,0,9	0/0:8,0:8:11.99:0,12,106
chr10	82637855	.	TAA	T	1093.86	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=2.686;DP=518;FS=15.038;HRun=16;HaplotypeScore=67.4565;InbreedingCoeff=0.8580;MQ=63.88;MQ0=2;MQRankSum=-0.082;QD=9.77;ReadPosRankSum=2.320;VQSLOD=0.7600;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,26:35:24.43:370,24,0	0/0:8,0:8:20.39:0,20,267	0/0:27,0:14:5.48:0,5,177	0/0:17,0:7:10.72:0,11,70	0/0:27,0:31:69.81:0,70,717	0/0:16,0:19:46.82:0,47,488	1/1:3,5:10:18.69:127,19,0	1/1:18,11:29:22.33:222,22,0	0/0:16,0:16:33.06:0,33,387	0/0:22,1:27:44.72:0,45,699	0/0:18,0:21:42.06:0,42,496	0/0:20,0:20:44.50:0,45,513	0/0:12,0:15:32.44:0,32,367	0/0:16,0:18:31.27:0,31,277	0/0:13,0:19:36.52:0,37,357	0/0:19,0:22:52.87:0,53,594	0/0:11,0:20:33.09:0,33,340	0/0:15,0:18:34.69:0,35,343	1/1:7,2:11:3.79:78,4,0	1/1:3,10:13:29.84:248,30,0	0/0:10,1:12:1.64:0,2,225	0/0:14,0:14:3.01:0,3,270	0/0:16,0:16:40.19:0,40,416	0/0:16,0:15:33.10:0,33,421	0/0:9,0:15:17.40:0,17,179	0/0:22,0:27:61.16:0,61,647	1/1:2,12:14:26.96:226,27,0	0/0:7,0:8:20.43:0,20,244
chr10	82638785	.	AC	A	13665.78	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=0.705;DP=615;FS=2.778;HRun=7;HaplotypeScore=67.0935;InbreedingCoeff=0.9951;MQ=81.39;MQ0=0;MQRankSum=-5.671;QD=25.78;ReadPosRankSum=3.000;VQSLOD=5.7208;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:69.16:704,69,0	1/1:1,7:8:18.04:184,18,0	0/0:16,0:15:41.56:0,42,413	0/0:28,0:28:26.62:0,27,519	1/1:4,28:32:72.06:719,72,0	1/1:2,30:32:75.15:758,75,0	1/1:4,17:21:51.12:520,51,0	1/1:4,29:33:81.12:797,81,0	1/1:2,20:22:51.12:520,51,0	1/1:3,22:25:66.08:664,66,0	1/1:2,18:20:51.07:508,51,0	1/1:2,20:22:54.12:550,54,0	1/1:0,19:19:51.12:520,51,0	1/1:2,11:13:36.03:355,36,0	1/1:0,26:26:72.16:734,72,0	1/1:2,22:24:57.13:581,57,0	1/1:1,14:15:39.09:398,39,0	1/1:2,6:8:18.04:184,18,0	1/1:1,21:22:63.11:633,63,0	1/1:2,26:28:78.17:793,78,0	1/1:2,25:27:66.72:727,67,0	1/1:0,14:14:42.10:428,42,0	1/1:1,19:20:54.12:550,54,0	1/1:5,17:22:48.10:490,48,0	1/1:2,24:26:60.14:612,60,0	0/0:24,0:24:69.22:0,69,868	1/1:0,25:25:72.16:734,72,0	0/0:17,0:17:48.15:0,48,604
chr10	82639089	.	CT	C	10561.45	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=7.745;DP=441;FS=4.020;HRun=3;HaplotypeScore=115.2960;InbreedingCoeff=0.9740;MQ=77.68;MQ0=2;MQRankSum=-8.276;QD=28.39;ReadPosRankSum=2.284;VQSLOD=4.0574;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:22:53.48:480,53,0	1/1:0,4:4:12.02:122,12,0	0/0:19,0:18:49.97:0,50,749	0/0:20,1:16:14.41:0,14,338	1/1:1,18:19:55.94:592,56,0	1/1:1,7:8:24.05:258,24,0	1/1:4,17:21:57.92:559,58,0	1/1:4,23:26:54.43:673,54,0	1/1:2,7:9:25.88:272,26,0	1/1:4,20:24:72.15:766,72,0	1/1:3,17:21:60.11:648,60,0	1/1:0,19:19:54.06:533,54,0	1/1:2,14:16:44.88:434,45,0	1/1:0,9:10:27.60:224,28,0	1/1:1,12:13:34.86:337,35,0	1/1:5,13:18:53.10:530,53,0	1/1:4,13:17:47.79:453,48,0	1/1:2,10:12:33.08:358,33,0	1/1:3,21:24:68.35:710,68,0	1/1:4,19:23:68.57:677,69,0	1/1:2,4:6:18.05:206,18,0	1/1:3,3:6:18.05:209,18,0	1/1:2,13:15:45.07:463,45,0	1/1:1,5:6:13.57:121,14,0	1/1:0,9:9:27.03:267,27,0	0/0:18,1:19:30.34:0,30,814	1/1:2,20:22:66.11:669,66,0	0/0:10,0:10:30.10:0,30,479
chr10	82639091	.	CT	C	6838.70	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=8.108;DP=437;FS=1.107;HRun=4;HaplotypeScore=126.8265;InbreedingCoeff=0.9204;MQ=77.81;MQ0=3;MQRankSum=-7.111;QD=18.63;ReadPosRankSum=3.887;VQSLOD=3.7030;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:21:41.02:301,41,0	1/1:0,4:4:11.96:98,12,0	0/0:19,0:18:50.17:0,50,642	0/0:21,0:16:28.02:0,28,327	1/1:2,17:19:47.36:379,47,0	1/1:1,7:8:20.95:174,21,0	1/1:4,17:21:43.95:315,44,0	1/1:10,19:28:49.13:538,49,0	1/1:1,7:8:19.54:158,20,0	1/1:5,19:24:68.82:590,69,0	1/1:5,16:21:44.78:371,45,0	1/1:2,17:19:47.67:362,48,0	1/1:3,13:16:41.35:313,41,0	1/1:1,9:10:25.40:174,25,0	1/1:2,11:13:30.72:238,31,0	1/1:5,11:16:43.26:325,43,0	1/1:4,13:17:40.89:295,41,0	1/1:3,9:12:5.91:155,6,0	1/1:6,18:24:53.77:440,54,0	1/1:4,19:23:58.11:430,58,0	1/1:1,4:5:8.28:74,8,0	1/1:2,3:5:11.99:104,12,0	1/1:2,12:14:38.81:313,39,0	1/1:1,5:6:9.80:66,10,0	1/1:0,9:9:23.85:183,24,0	0/0:17,1:18:33.30:0,33,693	1/1:2,20:22:56.72:442,57,0	0/0:10,0:10:30.10:0,30,420
chr10	82639132	.	TCTTTTC	T	5383.88	PASS	AB=0.986;AC=41;AF=0.732;AN=56;BaseQRankSum=2.997;DP=497;FS=2.877;HRun=0;HaplotypeScore=135.5895;InbreedingCoeff=0.0965;MQ=50.79;MQ0=26;MQRankSum=0.845;QD=14.28;ReadPosRankSum=6.085;VQSLOD=3.9920;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:23:20.92:78,0,21	1/1:7,0:7:3.38:158,3,0	0/0:46,0:9:9.19:0,9,107	0/0:64,0:17:22.58:0,23,365	0/1:16,0:16:14.88:335,0,15	1/1:9,0:9:15.90:269,16,0	0/1:18,0:16:39.08:71,0,39	0/1:28,0:28:15.63:16,0,80	1/1:6,0:7:10.28:168,10,0	1/1:16,0:16:34.51:595,35,0	1/1:6,8:13:14.43:267,14,0	1/1:15,0:14:24.33:400,24,0	1/1:9,1:10:26.70:273,27,0	1/1:16,0:16:35.64:503,36,0	1/1:13,0:12:11.34:259,11,0	1/1:11,0:11:9.09:294,9,0	1/1:16,0:17:22.76:397,23,0	0/1:12,0:12:52.60:205,0,53	0/1:28,0:28:84.53:177,0,85	0/1:14,0:13:13.35:13,0,16	1/1:3,0:2:3.43:20,3,0	1/1:4,0:3:4.64:64,5,0	1/1:14,0:13:21.44:333,21,0	1/1:8,0:6:5.96:91,6,0	1/1:15,0:15:13.55:274,14,0	0/1:31,0:29:92.82:93,0,658	0/1:23,0:22:29.69:30,0,60	0/0:9,0:7:17.90:0,18,241
chr10	82639133	.	CTTTTCTTTTTTTTTTTTTT	C	3666.13	PASS	AB=0.997;AC=22;AF=0.393;AN=56;BaseQRankSum=2.539;DP=507;FS=22.506;HRun=0;HaplotypeScore=236.0464;InbreedingCoeff=0.0992;MQ=50.02;MQ0=29;MQRankSum=3.833;QD=13.94;ReadPosRankSum=-1.549;VQSLOD=1.1152;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,14:23:32.89:632,33,0	0/1:8,0:7:11.77:12,0,234	0/0:47,0:9:9.28:0,9,157	0/0:63,0:17:23.92:0,24,338	0/1:18,0:17:30.68:31,0,602	0/1:8,0:8:21.65:22,0,498	1/1:11,6:15:23.88:360,24,0	1/1:18,11:28:63.02:675,63,0	0/1:7,0:7:9.93:10,0,245	0/1:18,0:18:22.83:23,0,1036	0/1:14,0:13:32.37:32,0,487	0/1:15,0:15:6.66:7,0,1000	0/0:12,0:12:26.86:0,27,788	0/0:16,0:16:15.17:0,15,1224	0/0:13,0:12:29.66:0,30,917	0/0:14,0:13:4.61:0,5,538	0/0:17,0:18:15.71:0,16,1114	0/1:13,0:12:25.04:25,0,701	1/1:13,13:27:57.54:1194,58,0	1/1:14,0:13:35.85:373,36,0	0/0:3,0:2:0:0,0,0	0/1:4,0:3:20.14:20,0,129	0/1:15,0:14:6.89:7,0,625	0/1:8,0:6:7.61:8,0,98	0/0:15,0:15:38.21:0,38,1044	0/0:32,0:30:78.21:0,78,2466	0/1:22,0:22:18.61:237,0,19	0/0:10,0:7:8.98:0,9,431
chr10	82639137	.	TC	T	4063.94	PASS	AB=0.915;AC=47;AF=0.839;AN=56;BaseQRankSum=3.138;DP=487;FS=6.052;HRun=1;HaplotypeScore=97.7207;InbreedingCoeff=0.3483;MQ=43.79;MQ0=28;MQRankSum=1.488;QD=10.61;ReadPosRankSum=1.160;VQSLOD=1.6493;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:23:12.51:174,0,13	1/1:7,0:6:0.33:50,0,0	0/0:39,1:5:5.97:0,6,21	0/0:58,0:14:12.89:0,13,146	1/1:20,0:19:6.34:193,6,0	1/1:11,0:11:28.51:197,29,0	1/1:16,0:14:2.78:131,3,0	0/1:28,0:27:29.31:332,0,29	1/1:5,1:6:12.59:84,13,0	1/1:20,0:20:38.40:300,38,0	1/1:14,0:13:14.30:132,14,0	1/1:16,0:15:28.52:215,29,0	1/1:10,0:10:20.63:123,21,0	1/1:14,0:14:34.96:243,35,0	1/1:13,0:12:14.72:130,15,0	1/1:13,0:12:22.28:154,22,0	1/1:19,0:19:34.61:263,35,0	1/1:12,1:12:4.51:140,5,0	1/1:24,0:24:20.72:362,21,0	1/1:13,0:13:5.06:180,5,0	1/1:3,0:2:0.47:1,0,0	1/1:4,0:3:2.64:27,3,0	1/1:16,0:15:19.91:187,20,0	1/1:7,0:6:6.11:46,6,0	1/1:16,0:16:10.17:151,10,0	0/1:21,11:30:61.47:61,0,262	1/1:21,0:21:5.56:187,6,0	0/0:6,0:3:8.92:0,9,64
chr10	82639710	.	G	GT	11108.22	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=9.411;DP=615;FS=0.669;HRun=7;HaplotypeScore=77.0557;InbreedingCoeff=0.9980;MQ=84.89;MQ0=0;MQRankSum=-0.595;QD=30.60;ReadPosRankSum=6.559;VQSLOD=4.2310;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1091	1/1:1,7:9:23.94:265,24,0	0/0:26,0:26:53.67:0,54,480	0/0:14,0:14:26.26:0,26,266	1/1:2,19:21:54.12:636,54,0	1/1:4,24:28:69.21:833,69,0	0/0:26,0:26:78.10:0,78,746	0/0:32,0:32:66.09:0,66,637	1/1:1,27:28:75.23:906,75,0	1/1:5,22:27:66.19:786,66,0	1/1:0,16:16:45.05:511,45,0	1/1:0,16:16:48.15:580,48,0	1/1:1,16:17:45.14:544,45,0	1/1:1,12:13:27.08:326,27,0	1/1:1,23:24:63.19:761,63,0	1/1:2,25:27:43.18:786,43,0	1/1:2,17:19:51.16:616,51,0	1/1:0,7:7:18.06:217,18,0	0/0:31,0:31:78.03:0,78,729	0/0:19,0:19:48.07:0,48,463	1/1:2,25:27:69.21:834,69,0	1/1:1,18:19:54.17:652,54,0	1/1:4,18:22:28.20:623,28,0	1/1:4,17:21:48.15:580,48,0	1/1:2,20:22:54.17:652,54,0	0/0:25,0:25:60.05:0,60,567	0/0:28,0:28:72.11:0,72,695	0/0:13,0:13:33.04:0,33,319
chr10	82640899	.	AC	A	15276.31	PASS	AB=0.815;AC=54;AF=0.964;AN=56;BaseQRankSum=-1.635;DP=482;FS=0.000;HRun=4;HaplotypeScore=86.3786;InbreedingCoeff=-0.0379;MQ=72.77;MQ0=0;MQRankSum=-2.370;QD=31.69;ReadPosRankSum=2.345;VQSLOD=5.2332;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:51.16:612,51,0	1/1:0,8:8:21.06:252,21,0	0/1:7,10:17:14.67:358,0,15	0/1:10,0:10:11.79:90,0,12	1/1:2,27:29:75.23:899,75,0	1/1:1,18:19:51.16:612,51,0	1/1:2,18:20:54.17:646,54,0	1/1:0,19:19:57.16:672,57,0	1/1:1,22:23:57.17:684,57,0	1/1:0,17:17:51.16:612,51,0	1/1:0,19:19:48.15:576,48,0	1/1:1,13:14:36.11:432,36,0	1/1:0,12:12:33.10:396,33,0	1/1:0,15:15:45.14:539,45,0	1/1:0,20:20:57.17:684,57,0	1/1:2,15:17:45.14:540,45,0	1/1:2,8:10:21.06:252,21,0	1/1:0,6:6:18.06:216,18,0	1/1:0,13:13:39.09:445,39,0	1/1:1,30:31:90.28:1079,90,0	1/1:0,22:22:66.20:792,66,0	1/1:1,17:18:9.26:534,9,0	1/1:0,22:22:57.17:684,57,0	1/1:0,12:12:33.10:396,33,0	1/1:1,13:14:39.12:468,39,0	1/1:2,21:23:63.17:743,63,0	1/1:1,22:23:54.15:634,54,0	1/1:0,12:12:36.11:430,36,0
chr10	82641712	.	G	GA	3610.36	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=7.447;DP=510;FS=1.776;HRun=9;HaplotypeScore=80.3818;InbreedingCoeff=0.8315;MQ=62.03;MQ0=2;MQRankSum=-7.570;QD=20.75;ReadPosRankSum=-3.965;VQSLOD=2.6248;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,23:34:74.98:784,75,0	0/0:5,0:5:15:0,15,130	0/1:11,0:8:0.10:0,0,105	0/0:7,0:7:4.69:0,5,94	0/0:20,0:21:41.01:0,41,341	0/0:17,0:18:47.02:0,47,396	1/1:7,9:16:33.05:348,33,0	1/1:6,17:23:51.11:549,51,0	0/0:11,0:11:23.99:0,24,208	0/0:21,0:21:44.46:0,44,374	0/0:22,0:22:56.95:0,57,488	0/0:13,0:13:26.99:0,27,234	0/0:21,0:21:59.97:0,60,516	0/0:20,0:20:53.98:0,54,469	0/0:26,0:25:59.95:0,60,521	0/0:19,0:20:32.86:0,33,286	0/0:36,0:36:99:0,102,884	0/0:18,0:17:35.94:0,36,305	1/1:4,6:10:1.03:238,1,0	1/1:9,17:26:56.68:582,57,0	0/0:11,1:12:2.81:0,3,252	0/0:17,0:17:38.99:0,39,338	0/0:21,0:21:47.98:0,48,416	0/0:14,1:15:2.81:0,3,253	0/0:12,0:12:29.88:0,30,260	1/1:5,21:26:34.03:575,34,0	1/1:6,11:17:14.29:370,14,0	1/1:1,10:11:15.04:164,15,0
chr10	82641732	.	TAA	T	4625.16	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.042;DP=504;FS=0.000;HRun=4;HaplotypeScore=79.0287;InbreedingCoeff=0.9948;MQ=79.00;MQ0=0;MQRankSum=-9.002;QD=37.60;ReadPosRankSum=-2.106;VQSLOD=3.9602;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:29:69.18:950,69,0	0/0:7,0:7:21.07:0,21,392	0/0:21,0:19:50.89:0,51,794	0/0:11,0:11:33.08:0,33,541	0/0:19,0:19:54.17:0,54,981	0/0:17,0:17:51.17:0,51,955	1/1:1,14:15:39.10:534,39,0	1/1:2,26:28:78.16:1032,78,0	0/0:13,0:13:36.12:0,36,670	0/0:25,0:25:72.25:0,72,1340	0/0:20,0:20:51.17:0,51,922	0/0:13,0:13:39.09:0,39,638	0/0:20,0:20:60.19:0,60,1086	0/0:25,0:25:72.25:0,72,1333	0/0:26,0:26:78.25:0,78,1430	0/0:13,0:13:36.12:0,36,671	0/0:32,0:32:93.28:0,93,1706	0/0:16,0:16:45.13:0,45,792	1/1:0,10:10:30.10:441,30,0	1/1:1,19:20:57.19:830,57,0	0/0:12,0:12:33.11:0,33,618	0/0:16,0:16:48.16:0,48,894	0/0:17,0:17:48.16:0,48,899	0/0:11,0:11:33.11:0,33,618	0/0:7,0:7:21.04:0,21,331	0/0:29,0:29:81.28:0,81,1514	1/1:2,19:21:57.19:838,57,0	0/0:11,0:11:15.05:0,15,281
chr10	82642208	.	CGTT	C	17150.94	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=10.750;DP=787;FS=10.491;HRun=0;HaplotypeScore=153.6201;InbreedingCoeff=0.9664;MQ=73.85;MQ0=2;MQRankSum=-3.406;QD=25.30;ReadPosRankSum=10.232;VQSLOD=3.0873;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,41:48:84.02:1144,84,0	1/1:2,4:6:7.10:167,7,0	0/0:38,0:36:76.90:0,77,1750	0/0:32,0:29:84.03:0,84,1445	1/1:3,29:32:72.60:972,73,0	1/1:3,17:20:28.49:471,28,0	1/1:4,26:30:44.02:600,44,0	1/1:9,25:34:64.58:763,65,0	1/1:6,22:28:48.67:590,49,0	1/1:1,41:42:99:1665,120,0	1/1:1,19:20:43.69:609,44,0	1/1:7,27:34:45.72:713,46,0	1/1:4,23:27:43.13:659,43,0	1/1:2,25:27:49.40:743,49,0	1/1:5,26:31:54.59:758,55,0	1/1:3,28:31:62.11:836,62,0	1/1:3,29:32:60.25:859,60,0	1/1:6,16:22:30.51:421,31,0	1/1:7,10:17:23.48:319,23,0	1/1:6,27:33:46.89:860,47,0	1/1:3,20:23:24.50:335,25,0	1/1:1,24:25:52.39:712,52,0	1/1:2,22:25:50.43:707,50,0	1/1:4,33:37:65.84:988,66,0	1/1:2,19:21:34.34:490,34,0	0/0:35,0:35:99:0,102,2149	1/1:5,28:33:60.68:768,61,0	0/0:4,0:4:12.04:0,12,223
chr10	82642226	.	C	CGTTGTTGTT	3017.04	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-8.295;DP=799;FS=0.663;HRun=0;HaplotypeScore=293.8595;InbreedingCoeff=0.7606;MQ=60.78;MQ0=2;MQRankSum=-4.842;QD=48.66;ReadPosRankSum=-2.303;VQSLOD=2.3675;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:84.18:0,84,1988	0/0:6,0:6:15.05:0,15,393	0/0:35,0:28:24.07:0,24,435	0/0:29,0:25:32.24:0,32,700	0/0:28,0:28:63.22:0,63,1568	0/0:19,0:19:33.09:0,33,771	0/0:31,0:31:51.14:0,51,1167	0/0:40,0:40:62.95:0,63,1536	0/0:27,0:27:48.12:0,48,1151	0/0:48,0:48:99:0,123,2955	0/0:22,0:22:45.15:0,45,1084	0/0:34,0:34:60.21:0,60,1535	0/0:29,0:29:56.22:0,56,1353	0/0:32,0:32:69.24:0,69,1727	0/0:33,0:33:66.22:0,66,1697	0/0:32,0:32:63.22:0,63,1526	0/0:33,0:33:66.22:0,66,1567	0/1:20,0:20:17.61:18,0,695	0/0:18,0:18:30.04:0,30,518	0/0:30,0:30:69.24:0,69,1694	0/0:21,0:21:24.08:0,24,601	0/0:23,0:23:30.10:0,30,757	0/0:29,0:29:54.18:0,54,1208	0/0:37,0:37:72.17:0,72,1672	0/0:21,0:21:39.13:0,39,954	1/1:14,21:37:84.28:2665,84,0	0/0:35,0:34:67.45:0,67,1563	1/1:2,3:5:12.04:460,12,0
chr10	82642578	.	CTTTTTTTTTT	C	14370.95	PASS	AB=0.853;AC=37;AF=0.661;AN=56;BaseQRankSum=5.264;DP=583;FS=5.729;HRun=19;HaplotypeScore=169.5013;InbreedingCoeff=0.8656;MQ=53.35;MQ0=4;MQRankSum=-7.022;QD=37.42;ReadPosRankSum=12.155;VQSLOD=-0.5735;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:57.20:0,57,2198	1/1:1,4:5:5.99:156,6,0	0/0:27,0:10:18.06:0,18,464	0/0:18,0:8:6.18:0,6,252	1/1:7,21:28:35.17:772,35,0	1/1:3,17:20:41.88:1095,42,0	0/0:23,0:23:57.20:0,57,2098	0/0:19,0:23:48.16:0,48,1939	1/1:3,16:19:29.99:781,30,0	1/1:4,23:27:60.50:1343,61,0	1/1:1,18:19:35.45:782,35,0	1/1:3,14:17:27.06:699,27,0	1/1:5,13:18:35.81:932,36,0	1/1:1,15:16:33.08:861,33,0	1/1:5,23:29:50.90:1285,51,0	1/1:3,19:22:47.96:1252,48,0	1/1:1,19:20:35.91:939,36,0	1/1:4,11:15:17.78:461,18,0	0/0:25,0:25:60.21:0,60,2439	0/0:29,0:29:66.21:0,66,2211	1/1:6,14:20:5.33:156,5,0	1/1:0,26:26:59.97:1405,60,0	1/1:1,17:18:29.84:618,30,0	1/1:5,19:24:14.80:348,15,0	1/1:3,9:12:17.78:469,18,0	0/1:24,1:29:18.04:18,0,2116	0/0:17,0:16:39.13:0,39,1455	0/0:7,0:8:21.07:0,21,830
chr10	82642825	.	C	CGTGTGT	4610.65	PASS	AB=1.000;AC=35;AF=0.648;AN=54;BaseQRankSum=7.244;DP=501;FS=29.841;HRun=0;HaplotypeScore=163.4473;InbreedingCoeff=-0.2114;MQ=51.16;MQ0=4;MQRankSum=-7.183;QD=10.38;ReadPosRankSum=-3.711;VQSLOD=1.3602;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,1:33:21.36:360,21,0	1/1:3,0:3:3.01:50,3,0	0/0:11,0:5:12.04:0,12,234	0/0:18,0:12:1.75:0,2,191	0/0:15,0:15:3.22:0,3,53	0/1:9,0:9:37.97:40,0,38	1/1:27,1:28:33.39:362,33,0	1/1:27,0:26:24.62:215,25,0	1/1:14,0:14:9.03:162,9,0	0/1:23,0:21:99:205,0,371	0/1:20,0:20:99:117,0,185	1/1:19,0:19:3.97:388,4,0	0/1:17,0:17:99:272,0,177	0/1:17,0:17:77.70:263,0,78	1/1:22,0:22:0.08:390,0,0	1/1:13,0:13:15.05:284,15,0	0/1:23,0:23:99:155,0,116	0/1:15,0:15:47.61:48,0,246	1/1:12,1:13:19.27:211,19,0	1/1:15,2:18:20.21:343,20,0	0/1:31,0:30:31.88:32,0,448	0/1:17,0:17:96.16:96,0,190	./.	0/1:21,0:21:41.07:101,0,41	0/1:16,0:15:38.85:45,0,39	0/1:24,0:19:99:148,0,754	1/1:13,1:14:13.96:240,14,0	0/1:5,0:5:44.81:85,0,45
chr10	82642829	.	C	CCGTGTGTGT	4685.59	PASS	AB=0.821;AC=27;AF=0.482;AN=56;BaseQRankSum=5.891;DP=557;FS=24.925;HRun=0;HaplotypeScore=177.2155;InbreedingCoeff=-0.5369;MQ=49.11;MQ0=4;MQRankSum=-5.874;QD=9.50;ReadPosRankSum=-0.125;VQSLOD=1.6949;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:31:59.60:126,0,60	1/1:0,0:6:3.01:85,3,0	0/0:13,0:5:12.04:0,12,316	0/0:16,0:11:19.59:0,20,294	0/0:5,1:20:2.77:0,3,24	0/1:4,0:16:67.46:76,0,67	0/1:25,0:25:99:123,0,103	0/1:25,0:24:43.71:44,0,363	1/1:3,0:19:8.71:269,9,0	0/1:22,0:20:99:249,0,295	0/1:20,0:21:99:187,0,139	0/1:5,0:31:42.43:569,0,42	0/1:11,0:16:99:409,0,187	0/1:5,0:20:56.84:412,0,57	0/1:3,0:24:14.72:544,0,15	1/1:1,0:17:15.05:393,15,0	0/1:8,0:26:99:243,0,155	0/0:13,0:13:3.58:0,4,239	0/1:15,0:14:98.55:146,0,99	0/1:19,0:19:93.55:94,0,101	0/1:31,0:30:84.85:85,0,327	0/1:18,0:19:79.94:173,0,80	0/1:6,0:14:0:0,0,0	0/1:6,0:26:30.88:82,0,31	0/1:6,0:23:32.83:79,0,33	0/1:26,0:21:97.49:97,0,1090	0/1:13,0:13:71.42:113,0,71	0/1:6,0:6:43.70:89,0,44
chr10	82642980	.	AT	A	3584.84	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.347;DP=516;FS=17.903;HRun=8;HaplotypeScore=49.5181;InbreedingCoeff=0.9762;MQ=69.56;MQ0=0;MQRankSum=1.703;QD=25.98;ReadPosRankSum=-1.705;VQSLOD=1.7897;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:63.10:608,63,0	0/0:11,0:11:30.09:0,30,359	0/0:9,0:9:24.01:0,24,256	0/0:5,0:5:6.02:0,6,72	0/0:37,0:37:99:0,105,1247	0/0:12,0:12:30.09:0,30,362	1/1:2,7:9:21.03:203,21,0	1/1:2,30:32:90.11:861,90,0	0/0:18,0:18:51.14:0,51,604	0/0:34,0:34:93.28:0,93,1110	0/0:17,0:17:39.12:0,39,469	0/0:22,0:22:66.20:0,66,796	0/0:16,0:16:39.12:0,39,471	0/0:14,0:14:42.13:0,42,507	0/0:29,0:29:81.23:0,81,956	0/0:14,0:14:36.11:0,36,435	0/0:16,0:16:48.15:0,48,580	0/0:16,0:16:45.14:0,45,544	1/1:4,16:20:48.08:464,48,0	1/1:2,31:33:90.14:869,90,0	0/0:12,0:12:30.09:0,30,362	0/0:14,0:14:39.11:0,39,459	0/0:19,0:19:54.15:0,54,639	0/0:9,0:9:21.06:0,21,254	0/0:24,0:24:69.21:0,69,834	0/0:20,0:20:57.17:0,57,679	1/1:0,22:22:60.10:579,60,0	0/0:10,0:10:24.07:0,24,290
chr10	82643981	.	T	TA	1567.02	PASS	AB=0.977;AC=17;AF=0.304;AN=56;BaseQRankSum=-3.911;DP=438;FS=1.058;HRun=13;HaplotypeScore=59.6885;InbreedingCoeff=0.4836;MQ=82.50;MQ0=2;MQRankSum=1.180;QD=6.10;ReadPosRankSum=-2.983;VQSLOD=1.4979;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,20:31:27.64:368,28,0	0/0:7,0:8:16.82:0,17,106	0/1:36,0:23:4.37:4,0,41	0/1:31,0:20:22.62:33,0,23	0/1:24,1:26:28.25:28,0,131	0/0:8,0:10:18.91:0,19,114	1/1:4,11:17:26.03:257,26,0	1/1:13,16:29:2.29:272,2,0	0/0:8,0:9:10.16:0,10,54	0/0:14,0:15:25.10:0,25,157	0/0:15,0:15:19.16:0,19,116	0/0:6,0:7:10.87:0,11,65	0/1:6,0:7:12.95:13,0,52	0/0:8,0:8:8.24:0,8,49	0/0:12,0:12:20.70:0,21,142	0/0:14,2:16:10.76:0,11,214	0/0:19,0:19:38.60:0,39,265	0/0:14,1:17:5.91:0,6,167	1/1:7,9:16:9.42:220,9,0	1/1:9,10:19:32.84:271,33,0	0/0:7,0:7:11.80:0,12,78	0/0:5,0:5:11.86:0,12,82	0/1:16,1:18:9.29:9,0,168	0/0:8,0:8:5.91:0,6,40	0/0:4,0:4:8.92:0,9,62	0/0:12,0:12:23.72:0,24,164	1/1:9,14:26:17.93:272,18,0	0/0:8,0:9:22.87:0,23,150
chr10	82644594	.	ACAC	A	6155.42	PASS	AB=0.902;AC=49;AF=0.907;AN=54;BaseQRankSum=0.188;DP=474;FS=4.708;HRun=0;HaplotypeScore=78.8946;InbreedingCoeff=0.2660;MQ=60.00;MQ0=19;MQRankSum=-0.653;QD=14.42;ReadPosRankSum=0.574;VQSLOD=4.1547;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:84.25:1093,84,0	1/1:2,1:4:9:102,9,0	./.	0/1:56,0:17:0:0,0,0	1/1:3,2:5:3.01:40,3,0	1/1:3,10:13:12.04:161,12,0	1/1:34,0:34:60.18:775,60,0	1/1:24,0:25:6.01:62,6,0	1/1:8,7:16:12.04:161,12,0	1/1:3,5:8:15.05:202,15,0	1/1:4,4:8:6.02:81,6,0	1/1:6,9:15:24.08:323,24,0	1/1:5,8:13:14.62:201,15,0	1/1:4,7:11:11.72:161,12,0	1/1:5,6:11:12.04:161,12,0	1/1:4,11:15:15.05:202,15,0	1/1:4,12:16:24.07:323,24,0	1/1:5,6:10:15.05:202,15,0	1/1:21,0:20:18.06:238,18,0	1/1:11,0:11:21.07:271,21,0	1/1:15,10:25:27.08:349,27,0	1/1:2,5:7:9.03:121,9,0	0/1:11,2:13:1.90:72,0,2	1/1:5,7:13:15.05:202,15,0	1/1:7,0:6:9.03:107,9,0	0/1:10,2:11:44.21:44,0,194	1/1:19,0:20:39.09:501,39,0	0/0:1,0:1:3:0,3,28
chr10	82645665	.	A	AT	15617.23	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-4.107;DP=538;FS=14.247;HRun=6;HaplotypeScore=57.2350;InbreedingCoeff=0.9848;MQ=76.20;MQ0=0;MQRankSum=-4.081;QD=32.20;ReadPosRankSum=3.972;VQSLOD=3.8960;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:57.18:717,57,0	1/1:0,6:6:15.05:189,15,0	0/0:12,0:12:27.05:0,27,272	0/0:11,0:11:20.85:0,21,213	1/1:3,19:22:54.17:677,54,0	1/1:2,19:21:54.14:663,54,0	1/1:1,15:16:42.13:528,42,0	1/1:5,21:26:57.18:717,57,0	1/1:0,11:11:30.10:377,30,0	1/1:3,23:26:66.20:817,66,0	1/1:3,18:21:54.17:679,54,0	1/1:3,16:19:51.16:639,51,0	1/1:3,12:15:33.10:404,33,0	1/1:4,16:20:48.15:603,48,0	1/1:1,25:26:75.24:944,75,0	1/1:1,13:14:39.12:491,39,0	1/1:0,19:19:57.18:717,57,0	1/1:0,20:20:54.07:642,54,0	1/1:2,22:24:66.19:814,66,0	1/1:1,35:36:99:1318,105,0	1/1:1,6:7:18.06:226,18,0	1/1:1,12:13:36.12:453,36,0	1/1:4,24:28:69.08:864,69,0	1/1:1,6:7:18.06:226,18,0	1/1:4,25:29:81.25:1007,81,0	0/0:23,1:24:31.41:0,31,635	1/1:3,31:34:72.23:904,72,0	0/0:6,0:6:15.03:0,15,153
chr10	82646661	.	TTTCC	T	4327.57	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=-12.179;DP=685;FS=8.586;HRun=0;HaplotypeScore=143.8873;InbreedingCoeff=-0.2394;MQ=61.29;MQ0=3;MQRankSum=6.960;QD=10.35;ReadPosRankSum=9.592;VQSLOD=2.2273;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:5.58:0,6,266	1/1:4,9:12:14.43:119,14,0	0/0:20,0:14:2.37:0,2,8	0/0:23,0:18:5.27:0,5,20	0/1:29,0:28:37.92:327,0,38	0/1:37,0:37:99:287,0,125	0/0:31,0:31:38.56:0,39,298	0/0:45,0:42:50.57:0,51,361	0/1:18,0:18:99:155,0,221	0/1:28,0:28:19.25:405,0,19	0/1:31,0:30:99:243,0,198	0/1:16,0:16:99:171,0,138	0/1:19,0:19:99:182,0,120	0/1:12,0:11:96.33:96,0,101	0/1:27,0:27:48.28:264,0,48	0/1:23,0:23:72.39:340,0,72	0/1:20,0:20:43.10:204,0,43	0/1:21,0:21:37.75:236,0,38	0/0:24,0:23:16.22:0,16,141	0/0:25,0:25:44.69:0,45,382	0/1:20,0:19:55.27:171,0,55	1/1:30,0:30:17.31:386,17,0	0/1:26,0:26:0.77:281,0,1	0/1:23,0:23:44.62:283,0,45	0/1:25,0:25:73.75:178,0,74	0/0:32,0:32:48.91:0,49,759	0/0:33,0:33:57.38:0,57,502	0/0:14,0:14:35.70:0,36,400
chr10	82646665	.	C	CT	4175.88	PASS	AB=0.693;AC=9;AF=0.161;AN=56;BaseQRankSum=-7.039;DP=681;FS=6.312;HRun=2;HaplotypeScore=107.8571;InbreedingCoeff=0.3279;MQ=58.50;MQ0=5;MQRankSum=2.611;QD=21.09;ReadPosRankSum=-0.406;VQSLOD=3.0576;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:21:7.70:562,8,0	0/0:13,0:12:22.92:0,23,233	0/0:15,0:9:21.54:0,22,258	0/1:16,1:14:4.47:4,0,253	0/0:28,0:27:81.21:0,81,966	0/0:34,0:34:99:0,99,1174	1/1:2,29:30:75.25:1078,75,0	0/1:18,25:39:99:747,0,295	0/0:18,0:18:54.15:0,54,638	0/0:27,0:27:78.24:0,78,945	0/0:34,0:33:90.25:0,90,1076	0/0:19,0:19:42.12:0,42,503	0/0:19,0:19:54.14:0,54,642	0/0:12,0:11:30.09:0,30,366	0/0:25,0:25:65.99:0,66,764	0/0:26,0:26:63.20:0,63,765	0/0:22,0:22:57.13:0,57,669	0/0:21,0:21:59.90:0,60,694	0/1:8,17:24:77.11:498,0,77	0/1:10,18:28:99:662,0,111	0/0:18,0:17:45.61:0,46,551	0/0:32,0:31:81.14:0,81,970	0/0:26,0:26:48.82:0,49,709	0/0:25,0:25:66.21:0,66,808	0/0:24,0:24:63.20:0,63,773	0/0:31,0:31:84.17:0,84,1000	0/1:17,15:32:99:624,0,166	0/0:14,0:14:42.13:0,42,520
chr10	82646981	.	C	CTTGT	14539.51	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-13.844;DP=566;FS=0.980;HRun=0;HaplotypeScore=101.8504;InbreedingCoeff=0.9607;MQ=62.87;MQ0=5;MQRankSum=1.624;QD=41.78;ReadPosRankSum=0.990;VQSLOD=5.2248;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:40:72.05:0,72,663	1/1:4,5:10:12.51:290,13,0	0/0:22,0:15:21.06:0,21,300	0/0:18,0:18:16.63:0,17,286	1/1:4,21:25:57.11:1274,57,0	1/1:5,13:20:42.14:987,42,0	0/0:1,0:11:27.03:0,27,252	0/0:15,0:28:20.51:0,21,172	1/1:4,21:25:51.18:1225,51,0	1/1:13,14:27:39.11:888,39,0	1/1:1,16:17:48.08:1059,48,0	1/1:5,8:13:18.06:432,18,0	1/1:5,12:14:18.06:432,18,0	1/1:3,19:22:51.18:1225,51,0	1/1:6,13:20:33.11:793,33,0	1/1:7,8:15:24.08:577,24,0	1/1:10,15:26:45.15:1080,45,0	1/1:8,8:17:24.08:556,24,0	0/0:10,0:18:24.03:0,24,224	0/0:5,0:25:48.05:0,48,447	1/1:5,10:16:30.10:721,30,0	1/1:5,11:16:30.10:720,30,0	1/1:10,15:27:38.69:898,39,0	1/1:3,17:21:44.94:1022,45,0	1/1:6,6:12:15.05:360,15,0	0/0:21,0:21:39.12:0,39,602	0/0:2,0:26:63.07:0,63,583	0/0:6,0:6:3.01:0,3,48
chr10	82648222	.	ATCG	A	3576.88	PASS	AB=0.810;AC=47;AF=0.979;AN=48;DP=509;FS=0.000;HRun=0;HaplotypeScore=155.4207;InbreedingCoeff=0.1669;MQ=68.82;MQ0=4;QD=8.22;VQSLOD=2.5230;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:20:5.95:42,6,0	1/1:4,2:6:6.02:79,6,0	./.	./.	1/1:21,3:24:9.01:101,9,0	1/1:11,9:20:24.08:315,24,0	1/1:8,0:21:14.88:104,15,0	./.	1/1:16,10:26:30.02:357,30,0	1/1:16,3:19:3.01:39,3,0	1/1:12,5:17:12.03:143,12,0	1/1:8,5:13:21.04:241,21,0	1/1:15,6:21:15.05:197,15,0	1/1:13,1:14:3.01:39,3,0	1/1:10,7:17:24.01:280,24,0	1/1:12,7:19:21.04:246,21,0	1/1:16,5:21:18.05:222,18,0	1/1:11,1:12:11.88:82,12,0	0/1:13,0:17:0:0,0,0	1/1:11,0:19:14.88:105,15,0	./.	1/1:12,4:16:9.03:118,9,0	1/1:18,3:21:5.88:79,6,0	1/1:16,1:17:9.47:88,9,0	1/1:15,9:24:30.07:365,30,0	1/1:12,0:20:14.88:105,15,0	1/1:14,0:21:14.88:105,15,0	1/1:4,0:9:17.86:126,18,0
chr10	82648852	.	A	ATT	5823.57	PASS	AC=46;AF=0.852;AN=54;BaseQRankSum=1.598;DP=366;FS=7.905;HRun=8;HaplotypeScore=55.0692;InbreedingCoeff=0.8458;MQ=73.04;MQ0=0;MQRankSum=-0.284;QD=19.03;ReadPosRankSum=2.417;VQSLOD=2.1781;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:23:48.16:751,48,0	1/1:0,0:3:7.49:26,7,0	0/0:6,0:6:12.42:0,12,119	0/0:10,0:8:14.75:0,15,147	1/1:0,0:15:32.57:117,33,0	1/1:3,0:16:32.16:110,32,0	1/1:0,7:8:20.56:294,21,0	1/1:5,35:41:99:1651,108,0	1/1:1,0:8:19.69:67,20,0	1/1:2,0:22:18.56:137,19,0	1/1:3,0:16:29.94:103,30,0	1/1:0,0:9:22.46:77,22,0	1/1:0,0:7:14.97:51,15,0	1/1:1,0:6:7.49:26,7,0	1/1:1,0:9:19.96:69,20,0	1/1:1,0:8:14.97:51,15,0	1/1:1,0:29:34.44:190,34,0	1/1:1,0:16:34.93:120,35,0	1/1:2,11:16:41.61:570,42,0	1/1:5,12:17:36.12:571,36,0	1/1:1,0:6:9.98:34,10,0	1/1:1,0:1:2.50:9,2,0	1/1:1,0:3:4.99:17,5,0	./.	1/1:2,0:10:19.96:69,20,0	0/0:19,0:20:45.05:0,45,560	1/1:1,15:17:45.15:714,45,0	0/0:24,0:24:59.92:0,60,669
chr10	82649813	.	AAGGTAAAGGTCATTTAGGGTAAC	A	7401.88	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.838;DP=670;FS=0.000;HRun=0;HaplotypeScore=388.2535;InbreedingCoeff=0.9976;MQ=83.08;MQ0=0;MQRankSum=-11.685;QD=89.18;ReadPosRankSum=-1.742;VQSLOD=3.4052;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.27:0,78,5942	0/0:10,0:10:30.09:0,30,2793	0/0:29,0:29:74.99:0,75,5205	0/0:15,0:15:38.95:0,39,2824	0/0:34,0:34:99:0,99,9746	0/0:31,0:31:93.32:0,93,7892	0/0:20,0:20:57.19:0,57,5332	1/1:0,30:30:89.55:1339,90,0	0/0:32,0:32:93.28:0,93,8375	0/0:27,0:27:81.27:0,81,7416	0/0:32,0:32:96.26:0,96,7958	0/0:23,0:23:66.67:0,67,5875	0/0:20,0:20:60.21:0,60,5772	0/0:29,0:29:75.24:0,75,7250	0/0:31,0:31:90.29:0,90,8017	0/0:22,0:22:66.23:0,66,5904	0/0:23,0:23:69.24:0,69,6163	0/0:19,0:19:51.18:0,51,4844	1/1:0,17:17:44.51:1179,45,0	1/1:0,21:21:48.16:3077,48,0	0/0:7,0:7:18.06:0,18,1438	0/0:21,0:21:63.21:0,63,5812	0/0:29,0:29:84.29:0,84,7760	0/0:14,0:14:39.07:0,39,3449	0/0:37,0:37:99:0,111,10787	0/0:39,0:39:99:0,114,11723	1/1:6,9:15:41.93:1807,42,0	0/0:16,0:16:45.15:0,45,4815
chr10	82649897	.	G	GTTT	10091.56	PASS	AB=0.579;AC=51;AF=0.911;AN=56;BaseQRankSum=-1.210;DP=617;FS=1.445;HRun=10;HaplotypeScore=142.9991;InbreedingCoeff=0.6559;MQ=76.63;MQ0=0;MQRankSum=-3.957;QD=18.09;ReadPosRankSum=5.244;VQSLOD=2.0068;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,18:27:34.32:598,34,0	1/1:2,0:8:13.67:96,14,0	0/0:31,0:31:30.66:0,31,459	0/0:25,0:24:4.15:0,4,383	1/1:9,1:40:87.78:712,88,0	1/1:7,0:27:5.44:321,5,0	1/1:1,19:23:60.16:1045,60,0	1/1:9,16:28:52.28:746,52,0	1/1:5,1:22:35.87:309,36,0	1/1:8,0:29:19.66:352,20,0	1/1:2,0:22:59.70:448,60,0	1/1:2,0:16:22.17:164,22,0	1/1:0,1:18:40.12:329,40,0	1/1:3,0:22:32.38:236,32,0	1/1:4,1:17:35.80:309,36,0	1/1:1,0:17:35.33:253,35,0	1/1:4,0:20:29.39:213,29,0	1/1:0,0:17:38.85:297,39,0	1/1:6,3:10:20.99:293,21,0	1/1:10,16:28:63.16:1106,63,0	1/1:3,0:19:32.87:251,33,0	1/1:3,0:12:26.87:202,27,0	1/1:1,1:26:49.06:399,49,0	1/1:2,2:22:40.10:300,40,0	1/1:1,0:14:23.91:182,24,0	1/1:8,0:37:7.95:83,8,0	1/1:5,15:24:46.36:783,46,0	0/1:3,0:11:7.74:63,0,8
chr10	82651085	.	C	CT	6370.56	PASS	AB=0.583;AC=34;AF=0.607;AN=56;BaseQRankSum=-10.705;DP=524;FS=0.000;HRun=10;HaplotypeScore=52.2912;InbreedingCoeff=0.8152;MQ=74.73;MQ0=0;MQRankSum=0.371;QD=20.10;ReadPosRankSum=2.790;VQSLOD=5.5921;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:72.96:0,73,576	1/1:2,8:10:21.05:224,21,0	0/0:12,0:12:15.53:0,16,130	0/0:14,0:12:8.14:0,8,49	1/1:5,20:25:14.22:522,14,0	1/1:3,12:15:27.07:288,27,0	0/0:15,0:16:40.99:0,41,326	0/0:35,0:36:79.89:0,80,644	1/1:2,11:13:15.04:160,15,0	1/1:5,10:15:8.44:295,8,0	1/1:7,20:28:35.35:543,35,0	1/1:6,10:16:24.06:256,24,0	1/1:6,11:18:11.25:298,11,0	1/1:4,14:18:33.08:352,33,0	1/1:5,18:23:45.01:480,45,0	1/1:2,17:19:20.47:423,20,0	1/1:1,9:10:27.07:288,27,0	1/1:3,15:18:36.06:373,36,0	0/0:24,0:24:65.87:0,66,536	0/0:20,0:20:45.40:0,45,367	1/1:4,18:23:23.31:438,23,0	1/1:1,16:17:48.08:496,48,0	1/1:3,18:21:48.59:512,49,0	0/1:4,10:14:25.23:168,0,25	0/1:4,10:14:15.81:255,0,16	0/0:28,2:30:13.92:0,14,525	0/0:18,0:18:47.94:0,48,394	0/0:8,0:8:20.98:0,21,172
chr10	82652140	.	GCAA	G	10835.39	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=14.201;DP=599;FS=3.683;HRun=0;HaplotypeScore=90.0072;InbreedingCoeff=0.9368;MQ=68.57;MQ0=2;MQRankSum=-2.044;QD=31.68;ReadPosRankSum=3.347;VQSLOD=4.9743;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.27:0,84,1693	1/1:2,9:11:24.08:359,24,0	0/0:19,0:13:4.61:0,5,224	0/0:25,0:19:27.08:0,27,487	1/1:2,23:25:57.19:844,57,0	1/1:2,20:22:60.20:896,60,0	0/0:14,0:14:30.06:0,30,550	0/0:40,0:40:78.27:0,78,1594	1/1:3,16:18:33.11:493,33,0	1/1:5,19:24:54.18:806,54,0	1/1:6,27:33:78.26:1165,78,0	1/1:2,16:18:42.14:628,42,0	1/1:7,12:19:33.11:493,33,0	1/1:1,14:15:39.13:583,39,0	1/1:1,13:14:33.11:493,33,0	1/1:1,12:12:24.08:359,24,0	1/1:6,24:30:57.19:852,57,0	1/1:4,13:17:33.11:493,33,0	0/0:22,1:23:6.35:0,6,951	0/0:30,0:30:84.29:0,84,1745	1/1:7,9:16:23.81:358,24,0	1/1:2,9:11:27.09:403,27,0	1/1:2,15:17:34.36:535,34,0	1/1:3,13:16:33.11:493,33,0	1/1:3,19:22:39.13:583,39,0	0/0:40,1:41:66.53:0,67,2218	0/0:32,0:31:75.26:0,75,1532	0/0:3,0:3:3.01:0,3,61
chr10	82652628	.	G	GTATTTATT	5617.28	PASS	AC=46;AF=0.958;AN=48;BaseQRankSum=-0.995;DP=248;FS=0.000;HRun=0;HaplotypeScore=56.3910;InbreedingCoeff=0.1225;MQ=60.25;MQ0=5;MQRankSum=-0.015;QD=24.75;ReadPosRankSum=1.321;VQSLOD=3.8714;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:12:14.98:123,15,0	1/1:1,1:2:3.01:124,3,0	0/0:5,0:3:3.01:0,3,74	./.	1/1:4,0:6:3.01:105,3,0	1/1:4,12:21:21.07:868,21,0	1/1:3,0:4:3:25,3,0	1/1:24,0:34:29.96:275,30,0	1/1:2,3:6:6.02:248,6,0	1/1:3,0:7:9.03:279,9,0	1/1:4,0:7:6.02:159,6,0	1/1:2,2:6:3.01:124,3,0	1/1:1,1:3:3.01:124,3,0	./.	1/1:5,4:11:9.03:372,9,0	1/1:3,2:8:6.02:248,6,0	1/1:7,11:18:15.98:846,16,0	1/1:11,4:17:9.92:374,10,0	1/1:9,0:20:44.99:454,45,0	1/1:6,0:6:5.99:50,6,0	./.	1/1:2,0:2:3.01:108,3,0	1/1:4,0:4:3.48:62,3,0	./.	1/1:6,0:6:3.01:98,3,0	1/1:3,2:6:9.03:263,9,0	1/1:6,0:10:14.89:114,15,0	1/1:7,0:6:6.02:178,6,0
chr10	82653420	.	AC	A	5287.36	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-9.104;DP=486;FS=0.379;HRun=2;HaplotypeScore=89.0458;InbreedingCoeff=0.9836;MQ=64.80;MQ0=0;MQRankSum=1.501;QD=35.73;ReadPosRankSum=-1.911;VQSLOD=4.3771;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:99:1285,99,0	0/0:8,0:8:24.06:0,24,303	0/0:8,1:9:17.54:0,18,226	0/0:7,0:7:11.81:0,12,101	0/0:9,0:9:24.08:0,24,321	0/0:15,0:15:45.14:0,45,605	1/1:0,33:33:87.28:1130,87,0	1/1:1,28:29:81.24:1024,81,0	0/0:17,0:17:51.06:0,51,671	0/0:24,0:24:72.21:0,72,935	0/0:7,0:7:21.06:0,21,274	0/0:12,0:12:30.99:0,31,423	0/0:12,0:12:36.05:0,36,461	0/0:9,0:9:24.97:0,25,334	0/0:23,0:23:63.21:0,63,873	0/0:19,0:19:54.18:0,54,747	0/0:29,0:28:83.08:0,83,1113	0/0:30,0:30:83.77:0,84,1105	1/1:0,24:24:72.22:918,72,0	1/1:1,12:13:30.10:385,30,0	0/0:29,0:29:84.26:0,84,1123	0/0:12,0:12:33.11:0,33,446	0/0:9,0:9:27.08:0,27,355	0/0:18,0:18:51.16:0,51,681	0/0:10,0:10:16.29:0,16,196	0/0:24,0:24:69.23:0,69,1026	1/1:0,15:15:42.14:545,42,0	0/0:5,0:5:15.05:0,15,225
chr10	82657553	.	T	TTCTCTCTCTCTCTC	11813.99	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=-3.784;DP=630;FS=3.450;HRun=0;HaplotypeScore=222.7856;InbreedingCoeff=0.3638;MQ=64.52;MQ0=7;MQRankSum=-0.595;QD=19.82;ReadPosRankSum=1.842;VQSLOD=3.4286;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:6:93,6,0	1/1:9,0:9:6.01:157,6,0	0/1:18,0:12:0:0,0,0	0/1:28,0:22:0.01:0,0,0	1/1:30,0:30:14.90:369,15,0	1/1:23,0:22:11.37:185,11,0	1/1:22,0:20:15.02:322,15,0	1/1:57,0:57:46.34:1067,46,0	1/1:18,0:35:21.05:1047,21,0	1/1:21,0:19:29.90:532,30,0	1/1:20,0:20:14.38:403,14,0	1/1:27,0:27:23.95:596,24,0	1/1:15,0:25:18.06:686,18,0	1/1:16,6:23:9.03:506,9,0	1/1:18,0:18:11.70:139,12,0	1/1:18,14:35:6.05:1091,6,0	1/1:24,0:25:30.03:926,30,0	1/1:3,0:3:2.98:22,3,0	1/1:17,0:17:20.72:699,21,0	1/1:29,0:29:16.67:595,17,0	0/0:14,0:14:0.47:0,0,1	0/0:15,4:19:0.32:0,0,1	1/1:13,0:13:6.01:99,6,0	1/1:14,0:13:5.88:264,6,0	1/1:10,0:18:3.01:55,3,0	1/1:30,0:28:39.06:1246,39,0	1/1:26,0:26:6.02:313,6,0	1/1:17,0:15:18.03:402,18,0
chr10	82657579	.	C	CTCTCTCTCTCTCTT	8248.64	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=1.506;DP=572;FS=40.858;HRun=0;HaplotypeScore=200.6233;InbreedingCoeff=-0.2352;MQ=50.98;MQ0=7;MQRankSum=-3.299;QD=18.33;ReadPosRankSum=2.978;VQSLOD=2.7748;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:26.58:277,27,0	0/1:4,0:4:18.94:67,0,19	0/0:23,0:10:13.99:0,14,157	0/0:32,0:19:22.54:0,23,173	0/1:29,0:29:99:209,0,180	0/1:22,0:21:92.37:113,0,92	1/1:19,0:17:23.80:441,24,0	1/1:38,0:37:84.59:1592,85,0	0/0:35,0:35:5.26:0,5,119	0/1:17,0:16:95.48:614,0,95	0/1:17,0:17:49.82:257,0,50	0/1:29,0:29:99:167,0,152	0/1:24,0:24:29.10:29,0,104	0/1:18,0:18:99:153,0,183	0/1:19,0:19:99:230,0,110	0/1:19,0:19:67.39:548,0,67	0/1:25,0:25:99:412,0,205	0/1:3,0:3:8.96:162,0,9	1/1:7,7:19:38.15:917,38,0	1/1:21,0:21:35.42:504,35,0	0/0:14,0:15:14.86:0,15,106	0/0:17,0:16:13.95:0,14,115	0/1:11,0:11:31.99:32,0,105	0/1:13,0:11:16.46:219,0,16	0/1:19,0:18:12.92:13,0,149	0/1:27,0:25:99:568,0,201	1/1:4,12:29:9.50:469,10,0	0/1:13,0:12:42.17:256,0,42
chr10	82658592	.	G	GTT	3444.54	PASS	AB=0.792;AC=12;AF=0.214;AN=56;BaseQRankSum=-4.654;DP=640;FS=9.208;HRun=12;HaplotypeScore=79.4112;InbreedingCoeff=0.7713;MQ=71.87;MQ0=2;MQRankSum=-0.622;QD=19.46;ReadPosRankSum=-2.210;VQSLOD=1.8615;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,28:38:49.96:964,50,0	0/0:7,0:7:18.01:0,18,167	0/0:21,0:18:29.32:0,29,191	0/1:22,0:15:25.97:26,0,63	0/0:21,0:26:49.75:0,50,450	0/0:38,0:38:89.68:0,90,816	0/1:3,10:14:18.82:190,0,19	1/1:12,15:31:62.06:723,62,0	0/0:21,0:22:50.65:0,51,456	0/0:23,0:23:59.77:0,60,535	0/0:27,0:30:47.32:0,47,518	0/0:24,0:26:38.37:0,38,392	0/0:16,0:17:20.77:0,21,234	0/0:18,0:19:13.67:0,14,292	0/0:23,0:25:53.52:0,54,520	0/0:20,0:22:41.56:0,42,372	0/0:21,0:27:29.46:0,29,418	0/0:9,0:9:24.01:0,24,221	1/1:5,4:13:22.92:239,23,0	1/1:3,19:24:56.54:682,57,0	0/0:26,0:26:59.99:0,60,555	0/0:23,0:25:22.45:0,22,450	0/0:15,0:17:32.56:0,33,336	0/0:16,0:16:41.96:0,42,389	0/0:22,0:24:47.34:0,47,459	0/0:31,0:33:62:0,62,609	1/1:10,22:34:50.01:621,50,0	0/0:5,0:6:8.88:0,9,130
chr10	82658789	.	G	GA	4367.86	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-9.949;DP=508;FS=14.082;HRun=6;HaplotypeScore=57.9607;InbreedingCoeff=0.9897;MQ=81.47;MQ0=0;MQRankSum=1.309;QD=30.98;ReadPosRankSum=-3.357;VQSLOD=2.8407;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:18:42.13:525,42,0	0/0:4,0:4:12.03:0,12,122	0/0:19,0:19:36.08:0,36,375	0/0:11,0:11:27.05:0,27,271	0/0:12,0:12:36.08:0,36,367	0/0:21,0:21:60.12:0,60,606	1/1:1,6:7:18.06:226,18,0	1/1:9,34:43:99:1270,102,0	0/0:10,0:10:24.05:0,24,244	0/0:20,0:20:59.34:0,59,583	0/0:23,0:23:60.13:0,60,612	0/0:19,0:19:57.12:0,57,575	0/0:6,0:6:18.04:0,18,183	0/0:22,0:22:66.14:0,66,667	0/0:19,0:19:51.11:0,51,520	0/0:13,0:13:36.08:0,36,367	0/0:27,0:27:72.16:0,72,735	0/0:16,0:16:42.09:0,42,428	1/1:3,18:21:54.17:667,54,0	1/1:3,21:24:63.16:774,63,0	0/0:16,0:16:42.09:0,42,429	0/0:26,0:26:72.16:0,72,735	0/0:16,0:16:48.11:0,48,490	0/0:19,0:19:45.08:0,45,452	0/0:15,0:15:45.10:0,45,459	0/0:20,0:20:45.10:0,45,459	1/1:1,27:28:72.23:906,72,0	0/0:13,0:12:30.06:0,30,306
chr10	82659447	.	GAT	G	12162.83	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=13.443;DP=570;FS=3.460;HRun=0;HaplotypeScore=69.0448;InbreedingCoeff=0.9960;MQ=84.31;MQ0=2;MQRankSum=-1.439;QD=34.36;ReadPosRankSum=6.875;VQSLOD=6.6741;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.20:0,57,997	1/1:1,9:10:24.08:325,24,0	0/0:17,0:17:42.13:0,42,707	0/0:17,0:17:38.47:0,38,587	1/1:1,22:23:63.21:837,63,0	1/1:2,21:22:54.18:730,54,0	0/0:22,0:22:57.20:0,57,999	0/0:36,0:36:96.30:0,96,1605	1/1:2,18:20:45.15:609,45,0	1/1:3,22:25:66.22:892,66,0	1/1:2,20:22:57.19:760,57,0	1/1:1,18:19:45.15:609,45,0	1/1:1,23:24:69.23:933,69,0	1/1:3,17:20:48.16:649,48,0	1/1:2,20:22:48.16:649,48,0	1/1:2,24:26:66.22:893,66,0	1/1:3,17:20:51.17:690,51,0	1/1:1,6:6:15.05:203,15,0	0/0:30,0:29:66.23:0,66,1157	0/0:26,0:26:72.23:0,72,1235	1/1:0,15:15:45.15:609,45,0	1/1:0,19:19:54.09:706,54,0	1/1:1,27:28:81.27:1095,81,0	1/1:1,10:11:27.09:365,27,0	1/1:2,18:20:45.15:609,45,0	0/0:22,0:22:57.18:0,57,971	0/0:18,0:18:48.16:0,48,826	0/0:6,0:6:18.06:0,18,315
chr10	82665516	.	A	AGTGTGT	4749.95	PASS	AB=0.880;AC=46;AF=0.885;AN=52;BaseQRankSum=-0.563;DP=592;FS=8.864;HRun=0;HaplotypeScore=146.1646;InbreedingCoeff=0.3687;MQ=55.27;MQ0=14;MQRankSum=-1.010;QD=9.24;ReadPosRankSum=0.431;VQSLOD=3.4781;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:10.12:0,10,124	1/1:12,0:11:5.78:141,6,0	./.	./.	1/1:24,0:23:2.65:81,3,0	1/1:16,11:32:5.55:164,6,0	0/0:16,0:16:19.60:0,20,303	1/1:33,0:32:8:51,8,0	1/1:7,3:10:6.49:135,6,0	1/1:19,0:19:15.05:351,15,0	1/1:15,0:14:8.65:178,9,0	1/1:9,9:20:6.02:145,6,0	1/1:24,0:24:8.76:149,9,0	1/1:11,0:11:9.03:217,9,0	0/1:26,0:27:32.03:266,0,32	1/1:8,0:19:12.04:306,12,0	1/1:18,0:17:27.09:627,27,0	1/1:18,0:18:9.03:155,9,0	1/1:23,0:21:6.01:95,6,0	1/1:22,0:20:5.61:48,6,0	1/1:37,0:36:18.06:378,18,0	0/1:13,0:19:0.04:0,0,1	1/1:11,0:11:3:25,3,0	1/1:25,0:24:2.41:46,2,0	1/1:22,0:21:6.02:122,6,0	1/1:32,0:31:41.40:682,41,0	1/1:16,0:21:14.16:231,14,0	1/1:18,0:16:6.91:159,7,0
chr10	82665536	.	T	TGTGTGTGT	3626.14	PASS	AB=1.000;AC=44;AF=0.846;AN=52;BaseQRankSum=-3.762;DP=546;FS=13.728;HRun=0;HaplotypeScore=130.3877;InbreedingCoeff=0.3021;MQ=48.60;MQ0=22;MQRankSum=-0.825;QD=8.04;ReadPosRankSum=1.539;VQSLOD=1.9847;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:8.77:0,9,151	1/1:14,0:13:5.74:140,6,0	./.	./.	1/1:15,0:14:2.80:104,3,0	1/1:30,0:29:2.04:62,2,0	0/0:20,0:20:21.28:0,21,366	1/1:18,0:17:4.91:15,5,0	1/1:8,0:8:5.13:87,5,0	1/1:17,0:17:18.11:358,18,0	1/1:14,0:13:5.35:89,5,0	1/1:19,0:18:6.02:157,6,0	1/1:25,0:25:9.44:149,9,0	1/1:10,0:10:6.02:130,6,0	0/1:21,0:21:19.48:19,0,50	1/1:20,0:19:9.03:364,9,0	1/1:20,0:19:24.08:469,24,0	1/1:24,0:24:10.37:136,10,0	1/1:15,0:12:6.01:95,6,0	1/1:20,0:18:5.59:34,6,0	1/1:44,0:41:18.06:397,18,0	0/0:14,0:14:0.47:0,0,1	1/1:14,0:13:3:25,3,0	1/1:14,7:21:2.52:15,3,0	1/1:18,0:17:6.02:122,6,0	1/1:31,0:30:26.73:383,27,0	0/1:20,0:20:0.65:104,0,1	1/1:11,0:9:7.27:169,7,0
chr10	82666998	.	C	CGTGTGTGT	4720.04	PASS	AB=1.000;AC=47;AF=0.870;AN=54;BaseQRankSum=-2.532;DP=660;FS=0.000;HRun=0;HaplotypeScore=259.8092;InbreedingCoeff=0.1576;MQ=42.01;MQ0=12;MQRankSum=2.579;QD=7.83;ReadPosRankSum=0.294;VQSLOD=2.9405;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:41:40.45:689,40,0	./.	1/1:28,0:10:0.10:15,0,0	0/1:24,0:8:10:10,0,16	1/1:25,0:25:6.81:45,7,0	1/1:32,0:32:8.90:142,9,0	1/1:23,0:22:29.56:534,30,0	1/1:32,0:31:26.05:288,26,0	0/1:23,0:23:3.36:13,0,3	1/1:31,0:30:20.62:237,21,0	1/1:7,0:7:1.55:4,2,0	1/1:31,0:30:20.09:141,20,0	0/1:20,0:20:2.22:110,0,2	1/1:20,0:20:5.92:42,6,0	1/1:18,0:19:3:25,3,0	1/1:17,0:17:2.28:9,2,0	1/1:28,0:27:13.77:114,14,0	1/1:19,0:18:22.40:232,22,0	1/1:22,0:19:27.57:596,28,0	1/1:10,10:21:12.04:379,12,0	1/1:25,0:25:3.86:23,4,0	1/1:24,0:24:11.42:117,11,0	0/0:17,1:18:0.83:0,1,2	1/1:32,0:31:2.92:32,3,0	0/0:26,0:26:0.47:0,0,1	1/1:23,0:22:20.58:189,21,0	1/1:11,10:25:21.96:674,22,0	1/1:9,0:9:5.98:61,6,0
chr10	82667036	.	T	TTTTG	9997.97	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=0.249;DP=573;FS=1.424;HRun=0;HaplotypeScore=168.3856;InbreedingCoeff=0.9444;MQ=52.33;MQ0=11;MQRankSum=-5.009;QD=33.44;ReadPosRankSum=-0.385;VQSLOD=4.7311;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:90.31:0,90,1467	1/1:4,3:7:9.03:218,9,0	0/0:53,0:24:18.06:0,18,282	0/0:52,0:31:14.77:0,15,517	1/1:6,9:15:25.33:523,25,0	1/1:5,9:15:24.08:583,24,0	0/0:22,0:21:44.31:0,44,610	0/0:22,0:22:36.11:0,36,549	1/1:5,11:17:30.06:676,30,0	1/1:4,10:16:39.11:868,39,0	1/1:3,10:14:31.35:626,31,0	1/1:8,16:22:39.13:945,39,0	1/1:6,5:12:8.68:218,9,0	1/1:8,8:17:23.93:582,24,0	1/1:7,6:13:19.31:388,19,0	1/1:10,5:15:18.06:401,18,0	1/1:5,11:17:29.46:664,29,0	1/1:8,9:17:24.08:573,24,0	0/0:19,0:19:24.08:0,24,383	0/0:20,0:20:44.22:0,44,768	1/1:8,13:22:28.34:660,28,0	1/1:11,6:17:18.49:359,18,0	1/1:5,4:9:9.03:219,9,0	1/1:12,17:31:49.28:1017,49,0	1/1:11,7:18:22.32:478,22,0	0/0:25,0:25:12.29:0,12,800	0/0:24,0:24:30.05:0,30,429	0/0:2,0:2:6.02:0,6,87
chr10	82667756	.	TCC	T	3200.77	PASS	AB=0.893;AC=22;AF=0.393;AN=56;BaseQRankSum=7.808;DP=628;FS=9.898;HRun=2;HaplotypeScore=178.5210;InbreedingCoeff=-0.3314;MQ=50.80;MQ0=11;MQRankSum=8.999;QD=8.27;ReadPosRankSum=7.098;VQSLOD=-0.3486;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:0.16:0,0,383	0/1:10,1:11:39.53:64,0,40	0/0:42,0:11:33.03:0,33,522	0/0:44,0:10:20.67:0,21,322	0/1:25,2:27:99:108,0,119	0/1:26,4:30:54.65:310,0,55	0/1:9,0:9:4.14:4,0,108	0/0:45,0:43:44.71:0,45,698	1/1:15,2:17:2.78:243,3,0	0/1:13,3:16:30.97:208,0,31	0/1:25,4:29:99:180,0,110	0/1:14,3:17:4.18:289,0,4	0/1:10,3:13:3.80:154,0,4	0/1:7,2:9:56.36:56,0,65	0/1:18,3:21:8.82:191,0,9	1/1:15,3:18:10.39:312,10,0	0/1:23,1:24:16.36:204,0,16	0/1:21,3:24:37.17:183,0,37	0/0:25,0:23:12.82:0,13,451	0/1:35,0:35:10.98:11,0,674	0/1:8,1:9:29.67:58,0,30	0/1:12,2:14:45.55:159,0,46	0/1:13,3:16:57.10:137,0,57	0/1:16,3:19:57.82:187,0,58	0/1:27,2:29:43.71:301,0,44	0/0:26,0:26:78.26:0,78,1536	0/0:28,0:28:62.75:0,63,568	0/0:10,0:10:30.08:0,30,537
chr10	82667780	.	C	CTCTTTCTT	8901.49	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=2.496;DP=645;FS=16.245;HRun=0;HaplotypeScore=234.6133;InbreedingCoeff=0.2175;MQ=53.66;MQ0=14;MQRankSum=3.843;QD=15.67;ReadPosRankSum=-0.297;VQSLOD=2.6694;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,8:22:17.96:414,18,0	1/1:11,0:11:23.30:123,23,0	0/0:46,0:13:19.25:0,19,286	0/1:45,0:9:4.53:8,0,5	0/1:32,0:32:30.71:186,0,31	1/1:23,0:24:17.23:152,17,0	1/1:2,4:7:3.01:125,3,0	1/1:42,0:38:59.73:790,60,0	0/1:15,0:15:12.62:61,0,13	1/1:21,0:21:26.48:254,26,0	0/1:28,0:28:2.47:210,0,2	1/1:16,0:16:15.08:141,15,0	1/1:11,0:11:10.11:69,10,0	1/1:8,0:8:12.95:78,13,0	1/1:24,0:24:14.95:215,15,0	1/1:18,0:18:20.19:169,20,0	1/1:27,0:27:9.37:237,9,0	1/1:24,0:25:26.05:159,26,0	1/1:9,12:19:42.07:1317,42,0	1/1:6,31:40:57.08:1873,57,0	1/1:9,0:10:14.77:105,15,0	1/1:11,0:11:6.66:80,7,0	1/1:20,0:20:7.17:141,7,0	0/1:13,0:13:11.56:12,0,15	0/1:34,0:34:34.79:351,0,35	0/0:30,0:30:63.20:0,63,1481	1/1:3,23:31:39.13:1614,39,0	0/1:9,0:9:15.06:15,0,141
chr10	82671737	.	CT	C	5292.38	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=9.429;DP=531;FS=1.193;HRun=6;HaplotypeScore=97.7684;InbreedingCoeff=0.9950;MQ=77.82;MQ0=0;MQRankSum=-3.320;QD=17.35;ReadPosRankSum=-0.085;VQSLOD=4.3932;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.19:0,84,1030	1/1:3,13:16:35.74:278,36,0	0/0:33,0:25:52.51:0,53,495	0/0:17,1:14:30.79:0,31,248	1/1:13,19:32:77.55:612,78,0	1/1:9,11:20:38.89:322,39,0	0/0:13,0:13:30.06:0,30,349	0/0:33,0:33:81.24:0,81,1023	1/1:8,7:15:20.92:167,21,0	1/1:9,15:24:65.66:560,66,0	1/1:12,8:20:50.64:407,51,0	1/1:10,7:17:22.54:175,23,0	1/1:10,8:18:35.93:297,36,0	1/1:5,7:12:20.87:158,21,0	1/1:9,12:21:41.96:359,42,0	1/1:2,11:13:34.67:264,35,0	1/1:5,10:15:30.39:247,30,0	1/1:6,11:17:38.97:342,39,0	0/0:15,0:15:39.11:0,39,485	0/0:21,0:21:60.19:0,60,781	1/1:11,2:13:26.95:224,27,0	1/1:2,4:6:17.88:138,18,0	1/1:6,11:17:41.89:347,42,0	1/1:13,6:19:28.18:237,28,0	1/1:4,6:10:17.99:156,18,0	0/0:26,0:26:66.20:0,66,845	0/0:25,0:24:57.17:0,57,713	0/0:10,0:10:24.08:0,24,316
chr10	82671746	.	AAC	A	8045.46	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=5.549;DP=530;FS=2.584;HRun=0;HaplotypeScore=99.9588;InbreedingCoeff=0.9921;MQ=80.15;MQ0=0;MQRankSum=-1.271;QD=25.95;ReadPosRankSum=0.991;VQSLOD=5.3898;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:79.32:0,79,413	1/1:12,0:12:32.02:369,32,0	0/0:38,0:26:57.94:0,58,574	0/0:21,0:17:12.04:0,12,263	1/1:27,3:30:78.84:936,79,0	1/1:19,1:20:36.07:484,36,0	0/0:9,0:9:25.74:0,26,175	0/0:34,0:34:71.96:0,72,458	1/1:17,1:18:32.98:427,33,0	1/1:21,2:23:53.28:731,53,0	1/1:24,0:24:68.70:639,69,0	1/1:16,0:16:23.99:309,24,0	1/1:17,0:17:27.09:380,27,0	1/1:13,1:14:23.94:271,24,0	1/1:18,3:21:42.14:576,42,0	1/1:11,3:14:36.03:457,36,0	1/1:18,0:18:30.57:428,31,0	1/1:17,1:18:42.83:459,43,0	0/0:13,0:13:34.18:0,34,194	0/0:22,0:22:54.35:0,54,333	1/1:7,1:8:20.99:209,21,0	1/1:8,0:8:20.94:229,21,0	1/1:13,0:13:36.12:509,36,0	1/1:19,2:21:25.90:340,26,0	1/1:15,0:15:23.97:292,24,0	0/0:23,0:23:69.14:0,69,947	0/0:21,0:19:52.68:0,53,246	0/0:8,0:8:24.08:0,24,390
chr10	82671747	.	AC	A	7374.69	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=5.420;DP=529;FS=10.983;HRun=1;HaplotypeScore=93.4278;InbreedingCoeff=0.7504;MQ=79.58;MQ0=0;MQRankSum=-3.725;QD=19.36;ReadPosRankSum=5.202;VQSLOD=4.0955;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:15.03:15,0,94	1/1:4,8:12:32.98:336,33,0	0/0:37,0:25:45.79:0,46,419	0/0:21,0:17:16.86:0,17,152	1/1:3,26:29:83.87:831,84,0	1/1:1,19:20:36.10:421,36,0	0/0:9,0:9:4.81:0,5,80	0/0:34,0:34:14.19:0,14,175	1/1:2,16:18:33.02:346,33,0	1/1:10,14:24:67.68:718,68,0	1/1:0,24:24:71.83:708,72,0	1/1:0,16:16:23.98:258,24,0	1/1:0,17:17:27.07:305,27,0	1/1:1,13:14:23.98:239,24,0	1/1:4,17:21:42.09:463,42,0	1/1:3,11:14:36.02:369,36,0	1/1:0,18:18:30.56:352,31,0	1/1:9,8:17:51.10:561,51,0	0/0:15,0:15:13.25:0,13,89	0/1:22,0:22:10.23:10,0,75	1/1:6,1:7:20.98:191,21,0	1/1:0,7:7:20.98:211,21,0	1/1:0,13:13:36.10:418,36,0	1/1:2,18:20:27.06:293,27,0	1/1:0,15:15:24.07:293,24,0	0/0:24,0:24:72.13:0,72,798	0/1:21,0:19:2.23:37,0,2	0/0:8,0:8:24.08:0,24,301
chr10	82671748	.	CA	C	4213.01	PASS	AB=0.900;AC=44;AF=0.786;AN=56;BaseQRankSum=4.379;DP=538;FS=1.776;HRun=10;HaplotypeScore=105.6265;InbreedingCoeff=0.5519;MQ=79.14;MQ0=0;MQRankSum=-2.597;QD=9.43;ReadPosRankSum=4.679;VQSLOD=3.6863;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,26:31:65.98:573,66,0	1/1:12,0:12:19.85:73,20,0	0/0:37,0:25:27.11:0,27,322	0/0:21,0:17:13.62:0,14,115	1/1:29,0:29:48.02:185,48,0	1/1:20,0:20:30.58:122,31,0	0/1:3,6:9:12.19:135,0,12	1/1:6,27:34:52.82:672,53,0	1/1:19,0:19:4.50:79,4,0	0/1:25,0:25:4.98:106,0,5	1/1:25,0:25:17.97:155,18,0	1/1:16,0:16:20.04:78,20,0	1/1:18,0:18:0.47:63,0,0	1/1:15,0:15:15.25:63,15,0	1/1:21,0:21:33.41:120,33,0	1/1:14,0:14:26.02:98,26,0	1/1:19,0:19:3.48:70,3,0	1/1:18,0:18:12.09:111,12,0	1/1:3,11:14:32.95:277,33,0	1/1:3,19:22:50.96:442,51,0	0/1:8,0:8:7.57:8,0,17	1/1:7,0:7:13.27:58,13,0	1/1:13,0:13:30.80:117,31,0	1/1:21,0:21:19.45:75,19,0	0/1:16,0:16:0.91:65,0,1	0/0:24,0:24:54.12:0,54,580	1/1:1,20:21:53.99:469,54,0	0/0:8,0:8:24.06:0,24,265
chr10	82683711	.	T	TA	1884.69	PASS	AB=0.982;AC=47;AF=0.839;AN=56;BaseQRankSum=4.257;DP=438;FS=0.000;HRun=14;HaplotypeScore=69.7764;InbreedingCoeff=0.2166;MQ=68.05;MQ0=1;MQRankSum=0.675;QD=4.55;ReadPosRankSum=0.042;VQSLOD=1.3978;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:25.22:124,25,0	1/1:5,0:5:2.88:15,3,0	0/1:18,0:11:2.83:3,0,60	0/0:11,0:9:1.12:0,1,34	1/1:21,0:21:35.07:182,35,0	1/1:20,0:20:42.27:212,42,0	1/1:10,1:10:17.25:91,17,0	0/1:28,0:27:22.20:60,0,22	1/1:11,0:11:8.33:46,8,0	1/1:20,0:20:32.24:154,32,0	1/1:19,1:20:26.51:137,27,0	1/1:12,0:12:5.75:30,6,0	1/1:12,0:12:11.47:59,11,0	1/1:10,0:10:14.38:76,14,0	1/1:15,0:15:17.69:91,18,0	1/1:16,0:16:14:69,14,0	1/1:26,0:26:28.75:152,29,0	0/1:10,0:9:3.68:29,0,4	0/1:18,0:18:31.08:31,0,33	1/1:18,1:19:19.02:74,19,0	1/1:7,0:7:3.35:16,3,0	1/1:1,0:1:2.88:15,3,0	1/1:10,1:11:14.37:76,14,0	1/1:6,0:6:2.56:15,3,0	1/1:24,0:23:9.82:126,10,0	0/1:18,2:20:39.28:39,0,73	1/1:27,0:26:13.45:103,13,0	0/0:12,0:13:26.44:0,26,172
chr10	82683724	.	A	AAAG	8388.82	PASS	AB=0.725;AC=47;AF=0.839;AN=56;BaseQRankSum=-5.054;DP=493;FS=3.670;HRun=0;HaplotypeScore=80.4959;InbreedingCoeff=0.5079;MQ=77.99;MQ0=1;MQRankSum=-0.433;QD=19.07;ReadPosRankSum=3.129;VQSLOD=4.0805;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,19:30:27.34:422,27,0	1/1:0,3:4:3.01:59,3,0	0/0:27,0:20:20.93:0,21,265	0/0:12,0:13:8.53:0,9,144	1/1:2,19:22:45.77:672,46,0	1/1:0,21:24:45.14:828,45,0	1/1:3,12:17:18.06:360,18,0	1/1:9,1:33:23.63:613,24,0	1/1:9,0:9:12.01:132,12,0	1/1:4,16:23:52.54:741,53,0	1/1:3,12:24:41.55:506,42,0	1/1:5,9:14:6.02:117,6,0	1/1:0,10:13:12.04:226,12,0	1/1:1,11:13:15.05:300,15,0	1/1:2,13:17:19:351,19,0	1/1:3,10:18:18:286,18,0	1/1:2,21:28:30.10:603,30,0	0/1:5,0:11:1.11:157,0,1	0/1:6,0:19:7.05:330,0,7	1/1:7,0:22:39.30:324,39,0	1/1:1,6:8:3.48:62,3,0	1/1:0,4:4:11.78:111,12,0	1/1:2,8:12:15.05:290,15,0	1/1:0,5:6:3.01:61,3,0	1/1:11,8:19:10.90:486,11,0	0/1:18,0:19:10.91:11,0,269	1/1:9,2:26:20.34:343,20,0	0/0:13,0:13:29.82:0,30,332
chr10	82684410	.	TG	T	775.43	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.830;DP=521;FS=0.756;HRun=4;HaplotypeScore=48.6026;InbreedingCoeff=0.9834;MQ=94.77;MQ0=0;MQRankSum=-2.986;QD=26.74;ReadPosRankSum=0.630;VQSLOD=2.3381;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.16:0,66,883	0/0:5,0:5:15.05:0,15,210	0/0:28,0:28:75.25:0,75,1029	0/0:22,0:22:59.87:0,60,795	0/0:16,0:16:42.13:0,42,570	0/0:21,0:21:63.21:0,63,874	0/0:14,0:14:39.13:0,39,546	0/0:34,0:34:93.31:0,93,1301	0/0:14,0:14:39.13:0,39,546	0/0:17,0:17:51.10:0,51,686	0/0:15,0:15:42.14:0,42,586	0/0:20,0:20:57.18:0,57,781	0/0:15,0:15:42.14:0,42,587	0/0:15,0:15:42.14:0,42,588	0/0:22,0:22:66.22:0,66,923	0/0:24,0:24:72.24:0,72,1006	0/0:24,0:24:72.22:0,72,989	0/0:15,0:15:42.14:0,42,583	0/0:16,0:16:42.13:0,42,573	0/0:16,0:16:48.12:0,48,647	0/0:23,0:23:63.21:0,63,881	0/0:7,0:7:21.07:0,21,294	0/0:14,0:14:39.13:0,39,545	0/0:20,0:20:57.19:0,57,796	0/0:29,0:29:87.27:0,87,1199	1/1:2,20:22:21.18:678,21,0	0/0:24,0:24:72.21:0,72,973	1/1:0,7:7:18.06:216,18,0
chr10	82685331	.	C	CTGTGTGTGTGTGTGTG	7142.07	PASS	AC=40;AF=0.833;AN=48;BaseQRankSum=-4.070;DP=384;FS=3.842;HRun=0;HaplotypeScore=136.9118;InbreedingCoeff=0.5365;MQ=60.51;MQ0=3;MQRankSum=-1.047;QD=26.95;ReadPosRankSum=-1.418;VQSLOD=3.7607;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:13:8.50:155,9,0	./.	0/0:20,0:11:3:0,3,68	0/0:23,0:16:17.88:0,18,318	./.	1/1:6,6:16:3.01:228,3,0	1/1:11,0:11:3.01:49,3,0	1/1:30,0:30:51.12:1478,51,0	1/1:12,0:12:12:259,12,0	1/1:19,1:20:20.96:501,21,0	./.	1/1:14,0:14:18.06:686,18,0	1/1:5,5:18:3.01:228,3,0	1/1:8,0:8:6.02:269,6,0	1/1:7,3:17:3.01:188,3,0	1/1:1,0:13:3.01:169,3,0	1/1:10,0:10:12.04:638,12,0	1/1:1,3:7:9.03:543,9,0	1/1:10,0:10:18.06:631,18,0	1/1:7,0:6:5.91:38,6,0	1/1:14,0:13:2.94:18,3,0	1/1:7,0:7:6.02:314,6,0	./.	1/1:7,0:15:8.24:425,8,0	1/1:4,8:14:3.01:218,3,0	0/0:25,0:26:57.04:0,57,1645	1/1:8,0:8:6.02:105,6,0	0/0:11,0:11:30.10:0,30,1332
chr10	82685440	.	ATCTCTCTCTCTCTC	A	3438.50	PASS	AB=1.000;AC=39;AF=0.886;AN=44;BaseQRankSum=4.222;DP=328;FS=18.720;HRun=0;HaplotypeScore=114.7254;InbreedingCoeff=0.1209;MQ=56.24;MQ0=22;MQRankSum=-2.315;QD=15.08;ReadPosRankSum=2.245;VQSLOD=0.8127;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,2:7:3.01:117,3,0	1/1:4,0:4:3.01:116,3,0	./.	./.	1/1:8,0:8:3.01:48,3,0	1/1:12,0:12:3.01:114,3,0	1/1:10,1:11:3.01:117,3,0	./.	1/1:10,0:10:3.01:105,3,0	1/1:15,0:13:12.04:380,12,0	1/1:9,0:9:9.03:327,9,0	1/1:11,0:12:9.03:310,9,0	1/1:13,0:13:6.02:204,6,0	./.	./.	1/1:14,0:14:3.48:116,3,0	1/1:6,0:5:3.01:106,3,0	1/1:18,0:17:2.77:105,3,0	0/0:14,0:14:1.82:0,2,5	1/1:3,3:6:3.48:118,3,0	1/1:13,0:13:3.01:73,3,0	./.	1/1:5,0:5:3.01:116,3,0	1/1:17,0:15:3.01:110,3,0	1/1:12,0:11:9.03:333,9,0	0/1:22,0:22:75.38:75,0,1266	1/1:7,5:11:12.04:448,12,0	0/0:17,0:16:9.01:0,9,403
chr10	82685476	.	CTCTCTCTCTCTCTCTG	C	4411.81	PASS	AB=0.993;AC=39;AF=0.696;AN=56;BaseQRankSum=4.206;DP=326;FS=27.112;HRun=0;HaplotypeScore=95.0971;InbreedingCoeff=0.1826;MQ=43.88;MQ0=31;MQRankSum=-1.697;QD=16.28;ReadPosRankSum=1.631;VQSLOD=1.2557;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:8:53.93:57,0,54	1/1:1,0:1:3.01:116,3,0	0/0:8,0:2:5.99:0,6,50	0/0:11,0:2:6.01:0,6,61	1/1:20,0:18:32.92:292,33,0	1/1:2,14:16:6.01:159,6,0	0/1:13,0:13:63.23:63,0,86	0/0:15,0:13:17.40:0,17,128	1/1:6,0:10:3.30:138,3,0	1/1:14,3:16:38.83:708,39,0	1/1:0,6:6:9.03:404,9,0	1/1:1,10:11:12.03:412,12,0	1/1:3,12:15:6.02:260,6,0	1/1:7,0:5:3:25,3,0	1/1:4,0:4:2.77:37,3,0	1/1:3,7:10:3.48:137,3,0	1/1:1,7:8:3.01:142,3,0	1/1:3,17:19:0.63:138,1,0	0/0:12,0:10:18.83:0,19,168	0/1:12,0:12:54.29:54,0,85	0/1:17,0:16:79.58:174,0,80	0/1:6,0:5:0:0,0,0	1/1:3,0:2:3.01:116,3,0	1/1:7,9:13:3.01:130,3,0	1/1:2,14:15:9.03:410,9,0	0/1:19,1:20:82.16:82,0,2415	0/1:12,0:11:99:358,0,158	0/0:9,0:7:18:0,18,608
chr10	82685490	.	CTG	C	1077.43	PASS	AB=1.000;AC=30;AF=0.577;AN=52;BaseQRankSum=2.732;DP=336;FS=15.615;HRun=0;HaplotypeScore=67.3768;InbreedingCoeff=0.6606;MQ=50.70;MQ0=21;MQRankSum=-0.708;QD=5.39;ReadPosRankSum=1.472;VQSLOD=1.4386;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:10:10.48:0,10,70	./.	0/0:20,0:13:32.13:0,32,306	0/0:15,0:9:17.13:0,17,178	1/1:23,0:21:38.90:316,39,0	1/1:14,0:13:5.94:42,6,0	0/0:14,0:14:16.54:0,17,130	0/1:18,0:16:0.55:1,0,169	1/1:9,0:9:5.86:37,6,0	1/1:16,0:15:38.86:323,39,0	1/1:6,0:6:8.71:54,9,0	1/1:11,0:11:9.92:79,10,0	1/1:13,0:13:5.95:45,6,0	1/1:7,0:5:3:25,3,0	1/1:6,0:6:8.90:66,9,0	1/1:7,0:7:2.96:20,3,0	1/1:9,0:9:2.94:25,3,0	1/1:19,0:18:3:26,3,0	0/0:15,0:13:29.87:0,30,247	0/0:14,0:14:15.99:0,16,100	0/1:17,0:16:1.01:126,0,1	0/0:0,4:4:0:0,0,0	./.	1/1:11,0:9:2.80:13,3,0	1/1:14,0:14:8.83:59,9,0	0/0:18,0:18:13.31:0,13,272	0/0:14,0:13:27.29:0,27,168	0/0:7,0:5:14.98:0,15,144
chr10	82687759	.	CA	C	4542.36	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.940;DP=482;FS=13.337;HRun=1;HaplotypeScore=48.7328;InbreedingCoeff=0.9981;MQ=86.35;MQ0=1;MQRankSum=-1.123;QD=39.50;ReadPosRankSum=-1.076;VQSLOD=3.4788;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:66.22:923,66,0	0/0:10,0:10:30.10:0,30,477	0/0:23,0:23:65.99:0,66,958	0/0:14,0:12:36.11:0,36,531	0/0:23,0:23:66.23:0,66,1052	0/0:20,0:20:60.20:0,60,959	1/1:0,12:12:33.11:461,33,0	1/1:0,24:24:72.23:982,72,0	0/0:12,0:12:36.12:0,36,576	0/0:22,0:22:63.21:0,63,1006	0/0:19,0:19:57.18:0,57,887	0/0:13,0:13:39.13:0,39,620	0/0:10,0:10:30.10:0,30,477	0/0:11,0:11:33.11:0,33,528	0/0:24,0:24:72.25:0,72,1143	0/0:17,0:17:51.16:0,51,790	0/0:31,0:31:93.32:0,93,1469	0/0:16,0:16:45.12:0,45,693	1/1:0,17:17:51.17:713,51,0	1/1:0,21:21:63.21:876,63,0	0/0:7,0:7:21.05:0,21,312	0/0:12,0:12:36.10:0,36,526	0/0:15,0:15:42.14:0,42,669	0/0:8,0:8:24.08:0,24,384	0/0:21,0:21:63.21:0,63,1007	0/0:30,0:30:90.28:0,90,1395	1/1:0,15:15:42.14:587,42,0	0/0:9,0:9:27.09:0,27,432
chr10	82691720	.	AT	A	1664.02	PASS	AB=0.759;AC=35;AF=0.625;AN=56;BaseQRankSum=3.130;DP=478;FS=13.587;HRun=16;HaplotypeScore=58.8569;InbreedingCoeff=0.2825;MQ=59.96;MQ0=6;MQRankSum=4.038;QD=4.73;ReadPosRankSum=4.149;VQSLOD=0.4948;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:28,6:34:14.26:14,0,297	0/1:5,1:6:11.55:12,0,20	0/0:17,0:9:3.97:0,4,15	0/0:6,0:4:2.60:0,3,10	0/1:8,12:23:16.18:132,0,16	1/1:6,11:18:6.14:142,6,0	0/1:9,2:11:24.05:24,0,35	0/0:27,4:33:8.25:0,8,341	0/1:3,3:6:13.38:42,0,13	1/1:6,13:22:12.75:168,13,0	1/1:3,8:12:19.58:113,20,0	1/1:6,9:14:11.64:72,12,0	1/1:12,6:19:25.08:142,25,0	1/1:5,6:12:9.41:46,9,0	1/1:3,12:16:17.58:108,18,0	1/1:5,5:11:10.72:60,11,0	1/1:13,19:33:10.05:163,10,0	1/1:4,7:12:19.66:114,20,0	0/0:25,1:27:40.60:0,41,400	0/0:14,0:15:20.78:0,21,159	0/1:5,11:17:29.81:69,0,30	1/1:5,7:13:13.53:77,14,0	0/1:6,8:16:3.51:80,0,4	1/1:3,14:16:29.38:180,29,0	1/1:7,2:11:13.73:77,14,0	0/0:25,1:26:22.72:0,23,306	0/1:10,1:12:0.19:0,0,97	0/1:12,2:14:12.21:12,0,117
chr10	82694355	.	CT	C	5977.63	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=8.596;DP=569;FS=2.297;HRun=11;HaplotypeScore=62.3233;InbreedingCoeff=0.8543;MQ=66.92;MQ0=7;MQRankSum=-0.838;QD=16.11;ReadPosRankSum=7.137;VQSLOD=5.3053;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:39,2:41:56.43:0,56,774	1/1:4,4:8:8.97:74,9,0	0/0:28,0:11:4.67:0,5,151	0/1:22,0:12:19.70:20,0,61	1/1:3,27:30:69.74:561,70,0	1/1:4,16:20:34.98:277,35,0	0/0:26,0:27:59.98:0,60,621	0/0:29,0:31:65.95:0,66,662	1/1:0,17:18:43.97:347,44,0	1/1:5,21:26:59.88:490,60,0	1/1:3,20:23:58.95:473,59,0	1/1:1,8:9:20.97:172,21,0	1/1:2,15:18:43.97:351,44,0	1/1:2,10:13:20.01:154,20,0	1/1:2,13:15:35.96:296,36,0	1/1:2,12:14:19.09:233,19,0	1/1:9,23:32:67.91:548,68,0	1/1:2,17:19:33.31:376,33,0	0/0:23,0:23:56.81:0,57,586	0/0:20,0:20:42.06:0,42,424	1/1:1,10:11:20.97:172,21,0	1/1:2,11:13:26.94:222,27,0	1/1:3,16:19:32.94:271,33,0	1/1:1,13:14:26.97:222,27,0	1/1:5,8:13:14.97:123,15,0	1/1:7,19:27:55.92:449,56,0	0/0:25,3:28:7.84:0,8,486	1/1:0,7:7:17.98:148,18,0
chr10	82694470	.	TAATTTGTCAGTCGG	T	18954.01	PASS	AC=34;AF=0.630;AN=54;BaseQRankSum=14.456;DP=441;FS=4.787;HRun=0;HaplotypeScore=211.4678;InbreedingCoeff=0.9856;MQ=79.34;MQ0=0;MQRankSum=-15.446;QD=85.38;ReadPosRankSum=2.639;VQSLOD=4.5799;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.25:0,78,4939	1/1:0,5:5:15.05:610,15,0	0/0:16,0:16:39.05:0,39,1638	0/0:17,0:18:32.69:0,33,1812	1/1:2,16:18:30.10:1203,30,0	1/1:4,15:19:48.15:1832,48,0	0/0:28,0:28:78.23:0,78,4528	0/0:24,0:24:54.17:0,54,2970	1/1:2,7:9:24.07:863,24,0	1/1:5,15:20:45.15:1824,45,0	1/1:8,14:22:39.13:1533,39,0	1/1:0,8:8:24.08:967,24,0	1/1:5,8:13:24.08:976,24,0	1/1:2,9:11:27.09:1058,27,0	1/1:1,10:11:30.10:1220,30,0	1/1:1,10:11:33.11:1297,33,0	1/1:5,11:15:30.10:1220,30,0	1/1:6,6:12:18.06:732,18,0	0/0:19,0:19:42.12:0,42,2322	0/0:27,0:27:81.23:0,81,5076	./.	1/1:5,11:16:33.10:1206,33,0	1/1:1,8:9:24.08:951,24,0	1/1:3,4:7:9.03:366,9,0	1/1:6,9:14:27.09:1098,27,0	0/0:26,0:26:75.26:0,75,4937	0/0:17,0:17:51.18:0,51,3500	0/0:10,0:10:30.10:0,30,2037
chr10	82694481	.	TCGG	T	3563.39	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=16.690;DP=407;FS=2.165;HRun=0;HaplotypeScore=161.9457;InbreedingCoeff=0.9510;MQ=84.28;MQ0=0;MQRankSum=-15.489;QD=19.58;ReadPosRankSum=1.987;VQSLOD=3.6872;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.27:0,84,2016	1/1:5,0:5:14.88:106,15,0	0/0:16,0:16:45.15:0,45,1048	0/0:18,0:18:47.34:0,47,1088	1/1:16,0:16:29.95:286,30,0	1/1:16,0:16:44.30:308,44,0	0/0:28,0:28:84.27:0,84,1976	0/0:25,0:25:69.24:0,69,1615	1/1:9,0:9:23.37:157,23,0	1/1:17,1:18:53.47:386,53,0	1/1:15,0:15:30.39:282,30,0	1/1:8,2:10:29.57:211,30,0	1/1:9,0:9:26.73:187,27,0	1/1:9,0:9:26.63:189,27,0	1/1:10,0:10:29.76:213,30,0	1/1:12,0:12:8.48:174,8,0	1/1:11,0:11:29.76:213,30,0	1/1:6,0:6:17.86:128,18,0	0/0:20,0:20:60.15:0,60,1325	0/0:31,0:31:93.32:0,93,2248	1/1:0,1:1:2.99:24,3,0	1/1:12,0:12:29.20:216,29,0	1/1:10,0:10:29.78:227,30,0	1/1:4,0:4:8.93:64,9,0	1/1:9,0:9:26.78:192,27,0	0/0:29,0:29:87.30:0,87,2101	0/0:20,0:20:60.21:0,60,1474	0/0:10,0:10:30.10:0,30,739
chr10	82694539	.	A	AC	16271.55	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-4.651;DP=575;FS=9.898;HRun=1;HaplotypeScore=92.1659;InbreedingCoeff=0.9961;MQ=67.98;MQ0=0;MQRankSum=-2.877;QD=43.62;ReadPosRankSum=5.102;VQSLOD=3.6313;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.29:0,87,1213	1/1:0,14:14:39.13:623,39,0	0/0:14,0:15:42.51:0,43,505	0/0:5,0:5:15.02:0,15,188	1/1:0,32:32:87.30:1389,87,0	1/1:0,30:30:81.28:1293,81,0	0/0:16,0:16:48.16:0,48,670	0/0:28,0:28:81.26:0,81,1117	1/1:0,27:27:78.27:1245,78,0	1/1:0,25:25:75.26:1199,75,0	1/1:2,29:31:81.28:1292,81,0	1/1:0,26:26:75.26:1198,75,0	1/1:2,20:22:60.20:947,60,0	1/1:1,14:15:33.11:527,33,0	1/1:1,15:16:39.13:622,39,0	1/1:0,17:17:45.15:718,45,0	1/1:4,18:22:60.20:956,60,0	1/1:0,10:10:27.09:431,27,0	0/0:23,0:23:69.23:0,69,965	0/0:22,0:22:66.22:0,66,923	1/1:0,7:7:18.06:287,18,0	1/1:0,23:23:66.23:1053,66,0	1/1:0,25:25:69.24:1102,69,0	1/1:0,12:12:30.10:479,30,0	1/1:0,19:19:57.19:910,57,0	0/0:25,0:25:69.23:0,69,961	0/0:27,0:27:78.25:0,78,1072	0/0:12,0:12:36.12:0,36,503
chr10	82694991	.	A	ATT	2189.55	PASS	AB=0.669;AC=12;AF=0.214;AN=56;BaseQRankSum=2.248;DP=539;FS=20.656;HRun=0;HaplotypeScore=100.8800;InbreedingCoeff=0.3403;MQ=52.49;MQ0=18;MQRankSum=7.148;QD=11.65;ReadPosRankSum=-5.232;VQSLOD=0.8765;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:32.70:0,33,459	1/1:3,0:3:9.03:138,9,0	0/0:8,0:2:6.02:0,6,94	0/0:25,0:7:12.01:0,12,204	1/1:12,22:34:30.07:572,30,0	0/0:33,0:33:53.57:0,54,750	0/0:23,0:21:46.88:0,47,654	0/0:32,0:31:87.28:0,87,1227	0/0:22,0:22:42.12:0,42,606	0/1:15,0:37:99:1038,0,346	1/1:3,14:19:32.93:339,33,0	0/0:9,0:9:17.98:0,18,226	0/1:6,7:14:49.07:49,0,53	0/1:5,0:12:6.13:6,0,38	0/1:6,17:24:37.71:38,0,40	0/0:18,0:18:44.28:0,44,577	0/0:16,0:15:36.42:0,36,422	0/0:11,0:8:21.04:0,21,271	0/0:11,0:11:32.81:0,33,423	0/0:23,0:23:42.10:0,42,618	0/0:11,0:11:15.04:0,15,212	0/1:6,13:20:99:157,0,125	0/0:25,0:24:47.40:0,47,709	0/0:23,0:23:38.21:0,38,556	0/0:16,0:16:36.01:0,36,546	0/1:21,0:19:16.38:16,0,582	0/0:10,0:10:21.53:0,22,292	0/0:11,0:10:26.55:0,27,340
chr10	82696047	.	C	CTTCCTTCCTTCT	10604.98	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=0.735;DP=747;FS=1.995;HRun=0;HaplotypeScore=236.1586;InbreedingCoeff=0.8871;MQ=65.10;MQ0=0;MQRankSum=-11.365;QD=49.79;ReadPosRankSum=-6.990;VQSLOD=3.1300;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:14,12:28:24.08:1087,24,0	0/0:16,0:16:42.14:0,42,1350	0/0:22,0:20:12.03:0,12,193	0/0:17,0:16:12.02:0,12,190	0/0:27,0:27:39.12:0,39,1185	0/0:30,0:30:48.14:0,48,1463	1/1:29,0:29:56.79:1829,57,0	1/1:33,0:33:30.08:774,30,0	0/0:20,0:20:48.16:0,48,1564	0/0:39,0:38:57.20:0,57,1959	0/0:27,0:27:54.15:0,54,1735	0/0:19,0:19:33.11:0,33,1058	0/0:13,0:13:24.08:0,24,827	0/0:29,0:29:63.19:0,63,1986	0/0:34,0:34:69.23:0,69,2276	0/0:24,0:24:54.17:0,54,1677	0/0:28,0:28:51.18:0,51,1693	0/1:18,0:18:56.54:57,0,809	1/1:16,5:21:23.94:897,24,0	1/1:21,14:37:57.07:2433,57,0	0/0:18,0:18:36.11:0,36,1024	0/0:34,0:34:60.18:0,60,1759	0/0:30,0:30:57.16:0,57,1623	0/0:27,0:27:42.13:0,42,1309	0/0:31,0:31:63.19:0,63,1838	0/0:33,0:33:69.21:0,69,2130	1/1:23,19:46:66.70:3528,67,0	0/0:16,0:16:27.09:0,27,931
chr10	82698102	.	CTGTG	C	1514.25	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=3.734;DP=456;FS=6.535;HRun=0;HaplotypeScore=113.5705;InbreedingCoeff=0.4737;MQ=67.68;MQ0=9;MQRankSum=1.198;QD=5.28;ReadPosRankSum=3.827;VQSLOD=1.3909;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:3.83:4,0,64	1/1:5,0:5:3.01:46,3,0	0/0:37,0:22:31.93:0,32,436	0/0:43,0:29:38.37:0,38,419	1/1:6,0:6:5.95:62,6,0	1/1:12,0:12:15.01:205,15,0	0/1:15,0:15:12.47:12,0,15	0/1:20,0:20:1.94:2,0,43	1/1:12,0:12:8.35:67,8,0	1/1:14,0:14:17.37:171,17,0	1/1:7,0:7:6.01:73,6,0	1/1:13,0:13:2.95:19,3,0	1/1:12,0:12:11.48:96,11,0	1/1:15,0:16:8.27:170,8,0	0/0:19,2:21:2.88:0,3,16	1/1:8,1:8:5.62:83,6,0	1/1:16,1:17:20.95:220,21,0	0/1:16,0:15:10.46:25,0,10	0/0:11,0:10:5.92:0,6,39	0/0:10,0:9:5.81:0,6,32	1/1:31,0:30:2.27:10,2,0	1/1:15,1:16:23.05:209,23,0	1/1:9,1:9:11.89:125,12,0	1/1:20,1:21:5.72:56,6,0	1/1:10,0:10:2.82:35,3,0	0/0:29,0:28:54.09:0,54,894	0/0:12,0:11:1.83:0,2,47	0/0:5,0:4:9.03:0,9,203
chr10	82698113	.	TGTGTGTGTGTGCGTGTGC	T	3713.48	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=3.866;DP=432;FS=3.639;HRun=0;HaplotypeScore=160.9561;InbreedingCoeff=0.0992;MQ=49.87;MQ0=21;MQRankSum=0.203;QD=12.38;ReadPosRankSum=4.356;VQSLOD=2.4086;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:35.97:556,36,0	1/1:3,0:2:3.01:48,3,0	0/0:33,0:17:40.07:0,40,476	0/0:35,0:21:32.53:0,33,331	1/1:7,0:7:0.28:18,0,0	1/1:10,0:10:12.51:196,13,0	1/1:18,0:15:0.27:474,0,0	1/1:1,21:22:52.38:644,52,0	0/1:13,0:12:15.10:46,0,15	0/1:15,0:14:0.61:152,0,1	0/1:4,0:4:17.68:43,0,18	0/0:8,0:8:8.94:0,9,71	0/1:12,0:12:13.32:13,0,17	0/1:16,0:15:65.16:204,0,65	0/1:23,0:23:14.52:15,0,19	1/1:8,0:7:9.01:131,9,0	0/1:15,0:14:58.13:241,0,58	1/1:14,0:13:6.02:132,6,0	0/1:7,0:6:14.43:14,0,57	1/1:11,0:10:6.02:90,6,0	1/1:31,0:27:2.75:94,3,0	0/1:15,0:14:31.72:204,0,32	0/1:10,0:8:35.29:57,0,35	0/0:21,0:21:2.49:0,2,6	1/1:13,0:12:6.02:99,6,0	0/0:28,0:26:48.99:0,49,1760	1/1:10,0:9:20.93:242,21,0	0/0:7,0:5:12.04:0,12,536
chr10	82698115	.	TGTGTGTGTGCGTGTGC	T	4377.44	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=2.742;DP=441;FS=1.275;HRun=0;HaplotypeScore=146.5758;InbreedingCoeff=0.4399;MQ=47.28;MQ0=23;MQRankSum=1.257;QD=13.77;ReadPosRankSum=2.402;VQSLOD=3.8919;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:2.68:180,0,3	1/1:3,0:2:3.01:94,3,0	0/0:33,0:17:33.36:0,33,475	0/0:34,0:20:28.04:0,28,290	1/1:8,0:8:6.02:85,6,0	1/1:11,0:11:15.05:425,15,0	0/1:19,0:15:0.76:239,0,1	1/1:22,0:22:21.15:396,21,0	1/1:14,2:15:11.69:152,12,0	1/1:1,14:14:23.97:385,24,0	1/1:4,0:4:6.02:142,6,0	1/1:9,0:9:2.95:19,3,0	1/1:14,0:14:14.58:190,15,0	1/1:17,1:17:8.42:360,8,0	0/0:6,17:23:3.35:0,3,16	1/1:6,1:6:8.81:202,9,0	1/1:14,0:13:11.53:502,12,0	1/1:3,10:12:6.02:177,6,0	0/1:8,0:7:13.94:14,0,55	1/1:12,0:11:4.99:18,5,0	1/1:31,0:27:2.75:58,3,0	1/1:15,1:15:24:351,24,0	1/1:10,0:8:11.89:196,12,0	1/1:22,0:22:5.59:76,6,0	1/1:4,0:12:5.51:81,6,0	0/0:27,0:25:46.84:0,47,1593	0/1:9,0:8:21.48:36,0,21	0/0:6,0:4:12.04:0,12,491
chr10	82698119	.	T	TGC	892.28	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=0.408;DP=446;FS=5.076;HRun=0;HaplotypeScore=101.5984;InbreedingCoeff=0.4396;MQ=43.80;MQ0=27;MQRankSum=2.080;QD=3.98;ReadPosRankSum=-0.015;VQSLOD=2.2469;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:22.31:0,22,131	1/1:3,0:2:2.98:22,3,0	0/0:28,0:14:34.67:0,35,452	0/0:29,0:16:40.39:0,40,436	1/1:10,0:10:5.95:62,6,0	1/1:13,0:12:14.91:111,15,0	0/0:18,0:14:21.28:0,21,116	0/0:22,0:21:26.92:0,27,123	0/1:19,0:18:11.56:28,0,12	1/1:15,0:14:16.90:127,17,0	1/1:6,0:6:5.99:50,6,0	1/1:10,0:10:2.92:19,3,0	1/1:16,0:16:12.87:99,13,0	0/1:17,0:16:10.14:112,0,10	0/1:22,0:22:9.49:9,0,10	0/1:12,0:10:20.81:28,0,21	0/1:17,0:15:6.17:73,0,6	0/0:12,0:11:5.54:0,6,29	0/0:5,0:4:11.86:0,12,80	0/0:12,0:11:5.81:0,6,32	0/0:18,14:28:2.88:0,3,15	0/1:18,0:17:2.08:162,0,2	1/1:11,0:9:11.82:102,12,0	1/1:23,0:23:5.93:56,6,0	1/1:12,0:11:2.73:17,3,0	0/0:26,0:24:68.14:0,68,767	0/0:8,0:7:13.62:0,14,71	0/0:8,0:6:11.61:0,12,150
chr10	82698129	.	TGCGTGTGC	T	2509.68	PASS	AB=0.988;AC=45;AF=0.804;AN=56;BaseQRankSum=5.928;DP=414;FS=8.463;HRun=0;HaplotypeScore=97.0764;InbreedingCoeff=0.3071;MQ=36.28;MQ0=34;MQRankSum=0.939;QD=7.05;ReadPosRankSum=0.063;VQSLOD=0.6675;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:12.04:177,12,0	1/1:4,0:3:3.01:48,3,0	0/0:17,0:8:18.87:0,19,120	0/1:19,0:7:22.94:23,0,28	1/1:12,0:11:0.47:1,0,0	1/1:17,0:15:14.34:201,14,0	1/1:19,0:15:17.28:229,17,0	1/1:25,0:22:45.81:429,46,0	1/1:21,0:20:6.98:86,7,0	1/1:16,0:14:15.32:147,15,0	1/1:6,0:6:4.26:49,4,0	0/1:10,0:9:0:0,0,0	1/1:12,0:12:5.78:65,6,0	1/1:12,1:12:9.01:148,9,0	0/0:18,2:20:0:0,0,0	1/1:14,1:13:11.68:139,12,0	1/1:17,1:15:22.08:312,22,0	1/1:12,0:11:6.01:82,6,0	1/1:4,0:3:6.02:77,6,0	0/1:14,0:14:0:0,0,0	1/1:26,0:21:3.01:50,3,0	1/1:13,0:12:9:120,9,0	1/1:10,1:9:6:68,6,0	0/0:20,1:21:0:0,0,0	1/1:11,1:11:3.01:36,3,0	0/1:23,0:21:15.80:16,0,550	1/1:6,0:5:11.95:128,12,0	0/1:9,0:7:1.34:1,0,197
chr10	82698135	.	TGC	T	1197.81	PASS	AB=0.977;AC=46;AF=0.852;AN=54;BaseQRankSum=5.938;DP=425;FS=5.061;HRun=0;HaplotypeScore=90.2144;InbreedingCoeff=0.0504;MQ=35.23;MQ0=40;MQRankSum=-1.057;QD=3.06;ReadPosRankSum=0.704;VQSLOD=1.2352;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:11.92:89,12,0	1/1:4,0:3:2.99:24,3,0	0/1:10,0:4:1.97:5,0,2	0/1:12,0:3:11.95:24,0,12	./.	1/1:16,0:14:11.26:96,11,0	1/1:23,0:15:17.59:123,18,0	1/1:27,0:23:34.21:230,34,0	1/1:22,0:20:8.12:53,8,0	1/1:18,0:16:11.48:69,11,0	1/1:5,1:6:2.99:23,3,0	1/1:11,0:10:2.92:17,3,0	1/1:1,11:12:3:29,3,0	1/1:14,0:13:5.84:54,6,0	0/1:23,1:24:0:0,0,0	1/1:16,1:15:11.53:82,12,0	1/1:20,0:17:17.12:138,17,0	1/1:13,0:12:3.84:12,4,0	1/1:5,0:3:5.82:35,6,0	0/1:15,1:15:0.18:0,0,0	1/1:26,1:22:3:25,3,0	1/1:14,1:12:5.99:50,6,0	1/1:10,0:8:2.99:23,3,0	0/0:5,18:22:0:0,0,0	1/1:11,1:11:2.94:18,3,0	0/1:22,1:21:27.78:28,0,222	1/1:7,0:6:5.97:45,6,0	0/1:11,0:9:9.34:9,0,52
chr10	82698250	.	TTTG	T	2095.53	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=4.109;DP=425;FS=3.316;HRun=0;HaplotypeScore=103.3762;InbreedingCoeff=0.6947;MQ=67.98;MQ0=4;MQRankSum=-1.099;QD=8.45;ReadPosRankSum=-1.039;VQSLOD=3.0963;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:39.04:0,39,454	0/1:3,0:3:3.34:19,0,3	0/0:20,0:17:25.62:0,26,245	0/0:19,0:16:31.94:0,32,305	1/1:24,1:24:31.22:282,31,0	1/1:15,0:15:17.02:219,17,0	0/0:14,0:14:20.96:0,21,287	0/0:30,0:30:54.13:0,54,703	1/1:10,0:10:20.56:166,21,0	1/1:11,0:11:26.13:194,26,0	1/1:14,1:14:25.96:195,26,0	0/1:12,0:12:21.67:60,0,22	0/1:14,0:14:14.68:104,0,15	0/1:14,0:14:3.82:160,0,4	1/1:22,0:22:10.90:64,11,0	1/1:15,0:14:5.93:40,6,0	1/1:24,0:24:9.30:60,9,0	1/1:14,0:14:5.85:63,6,0	0/0:10,0:9:23.52:0,24,255	0/0:11,0:11:32.86:0,33,296	1/1:11,0:10:16.76:103,17,0	1/1:9,3:12:25.45:222,25,0	1/1:7,1:8:8.60:120,9,0	1/1:12,0:12:13.46:77,13,0	1/1:11,0:11:16.80:156,17,0	0/0:22,0:22:57.08:0,57,828	0/0:22,0:22:43.27:0,43,407	0/0:12,0:12:35.98:0,36,593
chr10	82698251	.	TTG	T	4713.15	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-0.014;DP=440;FS=3.719;HRun=0;HaplotypeScore=88.3486;InbreedingCoeff=0.9610;MQ=67.53;MQ0=4;MQRankSum=-1.365;QD=17.79;ReadPosRankSum=-3.055;VQSLOD=3.9315;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:38.22:0,38,323	1/1:3,0:3:7.80:53,8,0	0/0:20,0:17:16.30:0,16,182	0/0:17,0:14:31.77:0,32,284	1/1:5,18:23:51.86:432,52,0	1/1:14,2:16:45.54:391,46,0	0/0:14,0:14:25:0,25,186	0/0:30,0:30:23.98:0,24,493	1/1:10,1:11:31.71:291,32,0	1/1:10,1:11:30:290,30,0	1/1:5,10:14:32.75:305,33,0	1/1:14,1:15:17.56:205,18,0	1/1:13,3:16:25.49:296,25,0	1/1:12,4:16:31.11:368,31,0	1/1:2,20:22:16.69:179,17,0	1/1:1,13:13:6.02:91,6,0	1/1:2,21:23:11.89:149,12,0	1/1:10,4:14:25.62:245,26,0	0/0:11,0:10:20.75:0,21,188	0/0:11,0:11:31.56:0,32,203	1/1:9,2:10:21.48:221,21,0	1/1:13,1:14:37.05:316,37,0	1/1:9,2:11:29.25:263,29,0	1/1:12,1:13:24.34:205,24,0	1/1:13,3:16:44:413,44,0	0/0:21,0:21:56.28:0,56,624	0/0:22,0:22:24.80:0,25,257	0/0:12,0:12:32.51:0,33,443
chr10	82698252	.	TG	T	4519.10	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=0.792;DP=439;FS=15.873;HRun=1;HaplotypeScore=79.9186;InbreedingCoeff=0.8872;MQ=65.42;MQ0=4;MQRankSum=-2.949;QD=16.26;ReadPosRankSum=-3.470;VQSLOD=3.1111;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:24.22:0,24,205	1/1:3,0:3:8.99:76,9,0	0/0:18,0:15:13.70:0,14,155	0/0:17,0:14:31.47:0,31,265	1/1:21,1:21:53.58:399,54,0	1/1:16,0:16:47.90:402,48,0	0/1:14,0:14:1.15:1,0,67	0/0:30,1:31:17.43:0,17,373	1/1:10,2:12:34.87:263,35,0	1/1:11,1:12:29.99:274,30,0	1/1:12,2:13:32.82:273,33,0	1/1:14,0:14:32.31:246,32,0	1/1:16,0:16:38.10:313,38,0	1/1:15,1:16:44.58:373,45,0	1/1:20,2:22:16.98:130,17,0	1/1:13,0:12:6.01:57,6,0	1/1:21,2:23:12.02:123,12,0	1/1:13,1:14:27.01:265,27,0	0/0:11,0:10:23.77:0,24,144	0/0:11,0:11:2.32:0,2,90	1/1:10,1:10:21.89:190,22,0	1/1:13,2:15:37.42:313,37,0	1/1:10,1:11:30.40:246,30,0	1/1:13,0:13:24.34:190,24,0	1/1:16,1:17:44.94:385,45,0	0/0:20,0:20:31.45:0,31,413	0/0:24,0:24:20.05:0,20,185	0/0:12,0:12:20.17:0,20,294
chr10	82698508	.	CAA	C	3483.89	PASS	AB=0.690;AC=40;AF=0.714;AN=56;BaseQRankSum=-2.983;DP=476;FS=23.494;HRun=16;HaplotypeScore=68.7962;InbreedingCoeff=0.4806;MQ=50.41;MQ0=21;MQRankSum=2.397;QD=8.80;ReadPosRankSum=3.774;VQSLOD=0.2906;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,2:35:22.36:22,0,79	1/1:4,4:8:2.35:66,2,0	0/0:7,0:2:2.84:0,3,14	0/0:7,0:2:3:0,3,28	1/1:9,10:18:26.50:253,26,0	1/1:4,14:20:41.34:324,41,0	0/1:6,0:12:9.37:10,0,9	0/1:16,6:38:62.20:62,0,251	1/1:5,10:16:0.12:139,0,0	1/1:10,11:22:32.65:275,33,0	1/1:4,6:13:2.47:95,2,0	1/1:3,5:8:14.87:125,15,0	1/1:8,12:20:23.40:199,23,0	1/1:9,6:15:11.31:100,11,0	1/1:5,16:23:35.28:329,35,0	1/1:6,11:17:35.69:288,36,0	1/1:8,17:24:15.72:256,16,0	1/1:5,6:10:20.59:153,21,0	0/0:13,0:20:32:0,32,198	0/0:3,0:9:7.62:0,8,31	1/1:6,9:14:17.10:149,17,0	1/1:7,6:10:17.64:137,18,0	1/1:10,7:14:16.79:136,17,0	1/1:5,10:16:29.68:237,30,0	1/1:5,5:8:14.70:112,15,0	0/0:14,0:15:28.41:0,28,272	0/0:13,0:20:19.47:0,19,124	0/1:9,1:5:14.18:14,0,22
chr10	82699780	.	T	TC	2240.92	PASS	AB=0.982;AC=28;AF=0.500;AN=56;BaseQRankSum=-1.895;DP=564;FS=62.471;HRun=0;HaplotypeScore=86.9492;InbreedingCoeff=-0.4937;MQ=40.07;MQ0=82;MQRankSum=6.714;QD=5.35;ReadPosRankSum=7.143;VQSLOD=0.9717;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,1:30:52.13:178,0,52	1/1:11,0:11:7.60:54,8,0	0/0:50,0:11:14.51:0,15,188	0/0:50,0:6:7.04:0,7,93	0/1:33,0:32:99:219,0,112	0/1:14,0:13:65.75:85,0,66	1/1:16,0:12:15.34:147,15,0	0/1:23,0:22:99:172,0,113	0/1:16,0:14:12.85:146,0,13	0/1:29,0:25:46.72:286,0,47	0/1:22,0:20:78.92:106,0,79	0/1:7,0:6:48.05:49,0,48	0/1:19,0:19:56.60:57,0,133	0/1:15,0:12:39.22:39,0,44	0/1:14,0:10:20.94:21,0,99	0/1:16,0:14:60.84:61,0,65	0/1:24,0:16:71.46:88,0,71	0/1:12,0:11:41.55:42,0,68	0/1:29,0:22:58.78:216,0,59	0/1:16,1:16:54.96:163,0,55	0/1:5,0:3:9.99:32,0,10	1/1:6,0:6:0.73:40,1,0	0/1:13,0:10:38.13:38,0,48	1/1:9,0:5:5.63:40,6,0	0/1:11,7:14:22.69:23,0,75	0/0:19,0:17:20.02:0,20,293	0/1:19,0:18:81.05:102,0,81	0/0:26,0:11:28.24:0,28,184
chr10	82699784	.	TTTTTTTTTTC	T	1594.22	PASS	AB=0.997;AC=21;AF=0.375;AN=56;BaseQRankSum=-4.560;DP=578;FS=0.465;HRun=0;HaplotypeScore=150.0890;InbreedingCoeff=-0.1508;MQ=40.52;MQ0=89;MQRankSum=-0.391;QD=4.09;ReadPosRankSum=-3.114;VQSLOD=1.9818;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:29:4.69:277,0,5	0/1:11,0:11:1.88:5,0,2	0/0:51,0:11:9.28:0,9,276	0/1:54,0:7:13.01:13,0,13	0/1:32,0:31:81.50:82,0,113	0/1:14,0:13:7.97:8,0,131	1/1:14,2:12:19.97:269,20,0	0/1:23,0:22:49.34:158,0,49	0/0:15,0:13:19.47:0,19,138	0/1:30,0:25:76.86:77,0,159	0/1:23,0:21:21.71:22,0,142	0/0:7,0:6:2.42:0,2,71	0/0:19,0:18:21.80:0,22,206	0/1:16,0:13:4.86:5,0,87	0/0:14,0:10:10.64:0,11,161	0/1:15,0:13:0.19:0,0,168	0/0:25,0:17:19.40:0,19,100	0/1:14,0:12:0.39:0,0,133	1/1:30,2:24:4.70:305,5,0	0/1:17,0:16:0.61:192,0,1	0/1:5,0:3:12.62:13,0,15	0/1:6,0:6:6.78:13,0,7	0/1:13,0:10:33.93:49,0,34	0/0:10,0:6:4.46:0,4,34	0/1:18,0:14:34.85:35,0,46	0/0:20,0:18:25.03:0,25,824	0/1:18,1:18:95.22:225,0,95	0/0:27,0:11:30.02:0,30,720
chr10	82699788	.	TTTTTTC	T	3435.60	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=-3.148;DP=570;FS=14.137;HRun=0;HaplotypeScore=112.8536;InbreedingCoeff=0.0313;MQ=36.83;MQ0=89;MQRankSum=-0.098;QD=7.17;ReadPosRankSum=-3.600;VQSLOD=0.3517;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:28:15.55:174,0,16	1/1:11,0:11:6.89:58,7,0	0/0:44,0:9:0.68:0,1,157	0/1:54,0:6:12.45:13,0,12	1/1:33,0:31:26.42:387,26,0	1/1:15,0:14:15.05:160,15,0	1/1:14,0:10:19.74:177,20,0	1/1:22,0:21:27.19:186,27,0	0/1:15,0:13:13.13:82,0,13	1/1:33,1:28:32.35:423,32,0	1/1:23,2:23:3.43:328,3,0	1/1:8,0:7:9.32:39,9,0	1/1:18,0:17:2.67:137,3,0	1/1:16,0:13:12.34:112,12,0	0/1:13,0:9:3.43:13,0,3	0/1:15,0:13:9.03:189,0,9	0/1:23,0:15:19.51:63,0,20	1/1:14,0:11:1.81:102,2,0	0/1:31,0:24:4.79:223,0,5	0/1:18,0:17:12.89:127,0,13	1/1:5,0:3:6.44:47,6,0	0/1:6,0:6:5.63:17,0,6	1/1:11,1:9:19.30:150,19,0	1/1:11,0:7:1.06:5,1,0	1/1:18,0:14:15.51:113,16,0	0/0:20,0:18:21.63:0,22,468	0/1:17,0:16:41.56:109,0,42	0/0:27,0:11:12.05:0,12,356
chr10	82699789	.	TTTTTC	T	3968.19	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=-4.542;DP=569;FS=26.691;HRun=0;HaplotypeScore=103.5316;InbreedingCoeff=0.1149;MQ=36.63;MQ0=90;MQRankSum=1.327;QD=7.59;ReadPosRankSum=-3.699;VQSLOD=-0.2302;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:28:23.48:152,0,23	1/1:2,8:10:5.99:54,6,0	0/1:45,0:9:0.60:1,0,128	0/1:54,0:6:12.31:13,0,12	1/1:30,3:31:44.32:508,44,0	1/1:14,1:14:13.24:203,13,0	1/1:14,0:10:19.86:160,20,0	1/1:22,0:21:24.97:184,25,0	1/1:15,0:13:1.43:133,1,0	1/1:31,3:28:42.56:439,43,0	1/1:24,1:23:5.42:325,5,0	1/1:8,0:7:9.05:60,9,0	1/1:18,0:17:9.20:195,9,0	1/1:16,0:13:17.22:154,17,0	1/1:12,0:8:8.12:50,8,0	0/1:15,0:13:2.05:223,0,2	0/1:23,0:15:11.45:79,0,11	1/1:14,0:11:14.07:162,14,0	0/1:32,0:25:9.56:229,0,10	0/1:18,0:17:8.93:144,0,9	1/1:5,0:3:5.97:46,6,0	0/1:6,0:6:5.75:11,0,6	1/1:12,0:9:21.36:179,21,0	1/1:11,0:7:1.73:18,2,0	1/1:18,0:14:19.61:125,20,0	0/0:19,0:17:21.28:0,21,370	0/1:17,0:16:17.97:119,0,18	0/0:27,0:11:10.76:0,11,286
chr10	82699790	.	TTTTC	T	3906	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-4.518;DP=568;FS=27.458;HRun=0;HaplotypeScore=97.3221;InbreedingCoeff=0.2645;MQ=36.63;MQ0=90;MQRankSum=0.831;QD=7.48;ReadPosRankSum=-4.038;VQSLOD=-0.3903;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:28:14.87:125,0,15	1/1:10,0:10:3.95:38,4,0	0/1:44,0:9:13.19:13,0,91	0/1:53,0:6:12.64:14,0,13	1/1:33,1:32:53.38:483,53,0	1/1:14,1:14:14.72:169,15,0	1/1:14,0:10:19.84:155,20,0	1/1:22,0:21:26.87:192,27,0	1/1:15,1:14:6.01:167,6,0	1/1:32,0:26:46.19:438,46,0	1/1:25,0:23:8.17:294,8,0	1/1:8,0:7:9.01:48,9,0	1/1:18,0:17:14.72:171,15,0	1/1:16,0:13:18.76:167,19,0	1/1:12,0:8:12.85:76,13,0	1/1:13,2:13:9.13:198,9,0	0/1:22,0:15:8.01:82,0,8	1/1:13,1:11:15.62:140,16,0	1/1:32,0:25:8.13:229,8,0	1/1:19,0:18:6.46:174,6,0	1/1:5,0:3:5.97:46,6,0	0/1:6,0:6:4.80:5,0,5	1/1:10,2:9:22.47:190,22,0	1/1:11,0:7:2.01:19,2,0	1/1:18,0:14:22.25:146,22,0	0/0:19,0:17:19.40:0,19,288	1/1:18,0:17:3.97:125,4,0	0/0:27,0:11:19.66:0,20,216
chr10	82699793	.	TC	T	4669.74	PASS	AB=0.964;AC=52;AF=0.929;AN=56;BaseQRankSum=-1.362;DP=549;FS=3.638;HRun=1;HaplotypeScore=72.7011;InbreedingCoeff=-0.0425;MQ=34.17;MQ0=92;MQRankSum=-0.813;QD=8.51;ReadPosRankSum=-1.101;VQSLOD=1.7525;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:31:44.48:277,44,0	1/1:8,1:9:5.67:29,6,0	0/1:40,2:9:20.46:20,0,52	0/1:48,2:5:11.86:14,0,12	1/1:32,0:30:75.65:533,76,0	1/1:13,0:12:30.36:189,30,0	1/1:13,0:9:19.97:121,20,0	1/1:22,0:21:38.50:240,38,0	1/1:13,0:11:24.46:164,24,0	1/1:31,0:25:59.06:378,59,0	1/1:25,0:23:61.34:361,61,0	1/1:7,0:6:12.52:76,13,0	1/1:17,0:16:43.79:252,44,0	1/1:16,0:13:29.67:185,30,0	1/1:13,0:9:18.10:90,18,0	1/1:15,0:13:32.87:191,33,0	1/1:24,0:14:26.70:149,27,0	1/1:14,0:11:20.67:147,21,0	1/1:31,0:24:60.89:365,61,0	1/1:17,0:16:44.34:261,44,0	1/1:5,0:3:7.78:50,8,0	1/1:2,4:6:2.12:12,2,0	1/1:11,0:9:25.26:149,25,0	1/1:10,0:6:2.64:20,3,0	1/1:19,0:16:26.49:172,26,0	0/1:15,1:14:15.81:16,0,92	1/1:17,0:15:29.77:152,30,0	0/1:27,0:11:1.23:55,0,1
chr10	82700384	.	TAG	T	2836.64	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.133;DP=449;FS=0.471;HRun=0;HaplotypeScore=56.9709;InbreedingCoeff=0.9822;MQ=66.94;MQ0=0;MQRankSum=1.386;QD=33.37;ReadPosRankSum=-0.772;VQSLOD=5.0904;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.33:0,96,1697	0/0:9,0:9:21.07:0,21,373	0/0:8,0:8:18.03:0,18,269	0/0:17,0:16:38.72:0,39,634	0/0:23,0:23:63.22:0,63,1115	0/0:23,0:23:66.23:0,66,1170	0/0:14,0:14:39.13:0,39,677	1/1:3,33:36:99:1357,99,0	0/0:15,0:15:45.15:0,45,792	0/0:25,0:25:66.23:0,66,1171	0/0:18,0:18:51.17:0,51,905	0/0:13,0:13:36.12:0,36,614	0/0:17,0:17:48.16:0,48,836	0/0:12,0:12:33.11:0,33,579	0/0:18,0:18:51.17:0,51,904	0/0:15,0:15:45.15:0,45,783	0/0:15,0:15:39.13:0,39,691	0/0:16,0:16:48.16:0,48,819	1/1:0,9:9:27.09:370,27,0	1/1:1,20:21:45.15:618,45,0	0/0:11,0:11:33.11:0,33,586	0/0:5,0:5:15.05:0,15,251	0/0:10,0:10:27.09:0,27,479	0/0:11,0:11:24.08:0,24,420	0/0:10,0:10:27.09:0,27,464	0/0:21,0:21:63.22:0,63,1095	1/1:0,19:19:48.16:652,48,0	0/0:4,0:4:12.04:0,12,213
chr10	82700566	.	C	CTT	4451.83	PASS	AB=0.689;AC=43;AF=0.768;AN=56;BaseQRankSum=1.487;DP=467;FS=9.474;HRun=11;HaplotypeScore=98.0066;InbreedingCoeff=0.6135;MQ=63.93;MQ0=4;MQRankSum=-3.018;QD=11.56;ReadPosRankSum=0.880;VQSLOD=2.5806;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,19:26:42.01:608,42,0	1/1:3,0:5:7.36:26,7,0	0/0:23,0:15:24.93:0,25,175	0/0:12,0:8:7.97:0,8,50	1/1:4,1:17:36.31:201,36,0	1/1:6,0:16:29.94:103,30,0	1/1:1,9:10:18.05:245,18,0	1/1:14,15:31:47.73:484,48,0	1/1:9,0:19:32.81:126,33,0	0/1:11,1:25:40.25:120,0,40	1/1:9,0:21:27.92:106,28,0	1/1:3,1:11:26.41:143,26,0	1/1:10,1:18:31.63:184,32,0	1/1:3,1:19:47.83:224,48,0	1/1:7,0:12:15.44:62,15,0	1/1:7,0:12:23.11:80,23,0	1/1:17,1:26:7.99:177,8,0	1/1:6,2:10:25.01:192,25,0	1/1:9,9:18:29.28:299,29,0	1/1:2,13:17:36.03:475,36,0	0/1:4,0:6:24.67:25,0,44	0/1:7,0:12:22.83:23,0,39	1/1:6,0:12:17.98:90,18,0	0/0:6,0:6:2.96:0,3,29	1/1:6,0:19:38.33:148,38,0	0/0:24,0:24:51.63:0,52,480	1/1:5,12:17:23.57:313,24,0	0/0:14,0:15:35.80:0,36,332
chr10	82700596	.	C	CT	4991.92	PASS	AB=0.646;AC=34;AF=0.607;AN=56;BaseQRankSum=3.038;DP=434;FS=0.480;HRun=8;HaplotypeScore=60.2378;InbreedingCoeff=0.7461;MQ=46.78;MQ0=13;MQRankSum=-7.635;QD=19.20;ReadPosRankSum=-0.635;VQSLOD=4.3584;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:47.99:0,48,433	1/1:1,4:4:12.04:138,12,0	0/0:23,0:8:2.74:0,3,26	0/0:12,0:1:2.99:0,3,24	1/1:6,18:24:48.05:514,48,0	1/1:1,13:13:27.08:311,27,0	0/0:7,0:6:3.93:0,4,123	0/0:24,0:24:47.74:0,48,430	1/1:7,9:16:30.05:319,30,0	1/1:7,11:17:36.08:396,36,0	1/1:4,15:19:42.12:484,42,0	0/1:6,6:12:6.41:186,0,6	1/1:5,11:16:21.53:243,22,0	1/1:11,10:21:20.63:453,21,0	1/1:3,11:14:30.09:346,30,0	1/1:5,6:10:18.02:194,18,0	1/1:11,18:26:33.10:380,33,0	1/1:7,2:8:6.49:70,6,0	0/0:16,0:16:29.96:0,30,274	0/0:20,0:20:44.62:0,45,394	0/1:2,3:5:12.05:92,0,12	1/1:2,9:10:18.01:193,18,0	1/1:3,13:16:24.03:262,24,0	1/1:1,2:3:3.01:35,3,0	1/1:6,11:17:36.04:376,36,0	0/0:16,0:16:39.01:0,39,355	0/0:18,0:18:35.89:0,36,328	0/0:11,0:11:27.01:0,27,247
chr10	82701744	.	CGTGTGT	C	279.48	PASS	AB=0.973;AC=9;AF=0.205;AN=44;BaseQRankSum=1.766;DP=546;FS=0.000;HRun=0;HaplotypeScore=116.2705;InbreedingCoeff=0.1533;MQ=59.89;MQ0=17;MQRankSum=-0.218;QD=2.05;ReadPosRankSum=-0.197;VQSLOD=2.1216;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,1:35:8.25:0,8,42	0/0:7,0:6:6.02:0,6,134	./.	./.	0/0:20,0:23:15.03:0,15,284	0/0:17,0:17:3.01:0,3,96	0/1:25,0:25:22.43:37,0,22	./.	0/1:18,0:18:6.51:7,0,381	0/0:25,0:25:18.16:0,18,323	0/0:15,0:14:9.03:0,9,231	0/0:12,0:12:15.05:0,15,338	0/0:9,0:9:9.03:0,9,287	0/1:13,0:12:12.95:13,0,145	0/1:17,1:18:38.48:38,0,365	0/0:20,0:19:21.07:0,21,516	0/0:32,0:33:5.76:0,6,902	0/0:14,0:13:13.59:0,14,269	./.	./.	0/0:40,0:37:27.09:0,27,684	0/0:18,0:17:15.05:0,15,391	./.	0/0:34,0:33:42.14:0,42,1047	0/0:21,0:19:14.91:0,15,267	1/1:23,4:27:16.33:271,16,0	0/1:19,0:20:20.81:21,0,42	1/1:13,0:12:2.98:22,3,0
chr10	82706339	.	G	GT	6502.46	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.662;DP=662;FS=0.000;HRun=2;HaplotypeScore=73.8187;InbreedingCoeff=0.9949;MQ=82.92;MQ0=0;MQRankSum=-2.742;QD=39.17;ReadPosRankSum=0.115;VQSLOD=5.0448;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,37:38:99:1438,99,0	0/0:5,0:5:15.05:0,15,195	0/0:20,0:20:57.17:0,57,717	0/0:20,0:20:42.08:0,42,506	0/0:32,0:31:90.29:0,90,1167	0/0:26,0:26:72.10:0,72,905	1/1:0,11:11:27.09:390,27,0	1/1:2,36:38:99:1465,105,0	0/0:19,0:19:54.16:0,54,685	0/0:26,0:25:75.24:0,75,967	0/0:20,0:20:60.18:0,60,764	0/0:32,0:32:84.27:0,84,1089	0/0:23,0:23:63.18:0,63,787	0/0:27,0:27:72.20:0,72,904	0/0:28,0:28:75.24:0,75,973	0/0:20,0:20:54.17:0,54,700	0/0:27,0:27:78.25:0,78,1012	0/0:17,0:17:45.15:0,45,583	1/1:0,25:25:75.25:1068,75,0	1/1:0,21:21:63.17:891,63,0	0/0:37,0:37:99:0,111,1440	0/0:7,0:7:21.07:0,21,273	0/0:22,0:22:66.21:0,66,857	0/0:24,0:24:69.22:0,69,894	0/0:31,0:31:90.25:0,90,1136	0/0:26,0:26:75.24:0,75,974	1/1:1,32:33:87.76:1251,88,0	0/0:7,0:7:21.07:0,21,272
chr10	82706693	.	C	CT	4531.52	PASS	AB=0.659;AC=40;AF=0.714;AN=56;BaseQRankSum=-6.569;DP=555;FS=3.123;HRun=14;HaplotypeScore=63.8208;InbreedingCoeff=0.1654;MQ=76.16;MQ0=10;MQRankSum=-0.880;QD=10.95;ReadPosRankSum=1.251;VQSLOD=4.7106;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,9:17:20.71:108,0,21	1/1:3,4:7:13.55:110,14,0	0/0:53,0:14:3.95:0,4,26	0/0:50,0:23:3.85:0,4,99	0/1:11,16:28:15.58:237,0,16	1/1:5,25:29:47.99:422,48,0	1/1:1,9:10:5.94:53,6,0	1/1:11,14:25:22.77:317,23,0	0/1:3,10:13:4.29:91,0,4	1/1:9,16:25:22.91:335,23,0	1/1:4,18:22:38.91:326,39,0	1/1:4,11:15:12.08:153,12,0	1/1:5,10:17:4.64:150,5,0	0/1:14,0:14:28.07:74,0,28	1/1:5,13:19:11.60:200,12,0	0/1:4,13:17:7.47:111,0,7	1/1:8,10:17:41.95:359,42,0	0/1:3,5:8:10.36:34,0,10	1/1:5,7:12:1.77:147,2,0	1/1:8,17:25:31.28:343,31,0	0/1:4,5:9:3.15:91,0,3	1/1:4,12:16:13.47:220,13,0	1/1:7,14:21:3.13:187,3,0	1/1:0,3:3:9:79,9,0	0/1:8,12:23:50.75:206,0,51	0/0:25,0:26:5.10:0,5,261	1/1:3,16:19:17.15:178,17,0	0/0:10,0:11:25.59:0,26,159
chr10	82707277	.	G	GA	2358.58	PASS	AB=0.914;AC=16;AF=0.286;AN=56;BaseQRankSum=-7.347;DP=530;FS=9.585;HRun=12;HaplotypeScore=58.1616;InbreedingCoeff=0.5580;MQ=66.38;MQ0=0;MQRankSum=2.935;QD=11.13;ReadPosRankSum=-0.016;VQSLOD=2.1685;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,30:37:68.07:810,68,0	0/0:12,0:13:37.82:0,38,267	0/1:17,0:16:20.06:20,0,39	0/1:13,0:7:0.36:0,0,66	0/0:34,0:36:58.30:0,58,547	0/1:18,1:20:3.48:3,0,131	1/1:1,10:11:21.03:204,21,0	1/1:9,16:26:44.82:402,45,0	0/0:18,0:18:41.70:0,42,306	0/0:20,1:21:18.46:0,18,293	0/0:18,1:19:18.49:0,18,292	0/1:10,2:14:1.27:1,0,135	0/0:13,0:13:26.81:0,27,197	0/0:18,0:19:36.53:0,37,260	0/0:21,0:22:33.33:0,33,337	0/0:17,0:18:34.78:0,35,246	0/0:26,0:26:62.63:0,63,459	0/0:11,0:11:26.84:0,27,196	0/1:10,11:20:24.15:213,0,24	1/1:5,14:20:23:372,23,0	0/0:17,0:18:43.74:0,44,312	0/0:4,0:8:6.10:0,6,18	0/0:19,0:21:6.97:0,7,283	0/1:7,0:7:1.72:2,0,86	0/0:22,2:24:36.44:0,36,430	0/0:22,0:25:19.62:0,20,287	1/1:7,17:24:53.92:507,54,0	0/0:5,0:6:14.91:0,15,109
chr10	82708141	.	CT	C	18189.11	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=0.745;DP=766;FS=0.000;HRun=7;HaplotypeScore=75.6003;InbreedingCoeff=0.9997;MQ=77.88;MQ0=0;MQRankSum=-4.603;QD=26.40;ReadPosRankSum=4.120;VQSLOD=5.3477;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,39:40:99:1102,108,0	1/1:2,10:12:30.07:306,30,0	0/0:17,0:17:45.09:0,45,527	0/0:17,0:17:45.25:0,45,487	1/1:1,23:25:71.19:710,71,0	1/1:3,23:26:66.14:673,66,0	1/1:0,23:23:66.15:673,66,0	1/1:6,30:36:90.17:905,90,0	1/1:1,38:39:99:1071,105,0	1/1:2,23:25:66.14:673,66,0	1/1:1,21:22:57.13:582,57,0	1/1:3,33:36:99:1010,99,0	1/1:2,34:36:99:1041,102,0	1/1:4,23:27:51.11:520,51,0	1/1:6,35:41:99:1010,99,0	1/1:2,30:32:87.20:888,87,0	1/1:1,17:18:45.10:459,45,0	1/1:1,13:14:30.06:306,30,0	1/1:3,22:25:63.14:643,63,0	1/1:2,27:29:78.17:796,78,0	1/1:4,37:41:99:1071,105,0	1/1:1,20:21:60.13:612,60,0	1/1:1,26:27:72.03:734,72,0	1/1:2,24:26:72.16:734,72,0	1/1:1,33:34:93.21:949,93,0	0/0:27,0:27:69.21:0,69,858	1/1:3,31:34:61.19:721,61,0	0/0:16,0:16:39.12:0,39,491
chr10	82711355	.	GGTGT	G	1414.06	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=3.472;DP=439;FS=17.138;HRun=0;HaplotypeScore=109.8378;InbreedingCoeff=0.6121;MQ=61.11;MQ0=12;MQRankSum=1.245;QD=13.22;ReadPosRankSum=1.284;VQSLOD=2.1575;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,6:17:14.87:186,15,0	0/0:9,0:9:5.91:0,6,68	./.	0/0:31,0:12:2.86:0,3,15	0/0:28,0:33:12.02:0,12,187	0/0:7,0:8:3.01:0,3,52	1/1:5,5:10:9.03:144,9,0	1/1:21,6:27:16.81:239,17,0	0/0:12,0:12:3.01:0,3,70	0/0:19,0:19:30.05:0,30,480	0/0:7,0:7:3.01:0,3,48	0/0:5,0:5:8.99:0,9,100	0/0:9,0:9:3.01:0,3,61	0/0:9,0:9:3.01:0,3,65	0/0:10,0:10:6:0,6,71	0/0:10,0:12:5.60:0,6,92	0/0:20,0:23:18:0,18,250	0/0:16,0:18:15.05:0,15,276	1/1:9,4:13:18.05:248,18,0	1/1:11,4:18:24.05:321,24,0	0/0:14,0:14:8.59:0,9,102	0/0:11,0:11:6.02:0,6,134	0/0:8,0:8:3.01:0,3,64	0/0:11,0:11:2.92:0,3,65	0/0:14,0:18:2.69:0,3,52	0/0:23,0:22:23.24:0,23,524	1/1:9,9:20:30.09:441,30,0	0/0:8,0:9:22.03:0,22,325
chr10	82713477	.	GTA	G	990.65	PASS	AB=0.643;AC=11;AF=0.500;AN=22;BaseQRankSum=3.914;DP=150;FS=11.683;HRun=0;HaplotypeScore=24.5486;InbreedingCoeff=0.5884;MQ=75.27;MQ0=4;MQRankSum=2.837;QD=14.57;ReadPosRankSum=-1.972;VQSLOD=1.3023;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:4,5:9:5.96:95,0,6	./.	./.	0/0:14,0:7:0:0,0,0	./.	./.	1/1:4,4:8:15.04:170,15,0	1/1:12,17:28:45.08:493,45,0	./.	./.	./.	./.	./.	./.	./.	./.	0/0:9,0:16:5.98:0,6,48	0/0:9,0:8:2.99:0,3,23	1/1:5,8:13:20.07:200,20,0	1/1:2,2:4:6.02:71,6,0	./.	./.	./.	./.	./.	0/0:4,0:4:9.03:0,9,143	1/1:3,2:5:6.02:71,6,0	0/0:13,0:13:32.76:0,33,459
chr10	82713836	.	G	GT	520.67	PASS	AB=0.963;AC=38;AF=0.679;AN=56;BaseQRankSum=-1.130;DP=267;FS=0.000;HRun=17;HaplotypeScore=97.4645;InbreedingCoeff=0.2786;MQ=58.26;MQ0=21;MQRankSum=0.527;QD=2.71;ReadPosRankSum=-2.767;VQSLOD=-0.7447;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:3.90:0,4,30	1/1:2,0:2:1.25:3,1,0	0/0:21,0:12:1.34:0,1,27	0/1:22,0:11:2.54:3,0,10	1/1:8,0:8:14.42:67,14,0	1/1:5,0:5:10.63:49,11,0	0/1:5,0:4:0.81:7,0,1	0/0:18,0:15:1.10:0,1,4	0/1:7,0:7:4.35:39,0,4	0/0:7,0:4:1.65:0,2,12	1/1:7,0:6:6.16:31,6,0	1/1:3,0:3:5.89:24,6,0	0/1:4,0:4:2.14:2,0,4	1/1:11,0:10:17.43:84,17,0	1/1:4,0:3:4.98:24,5,0	0/1:7,0:5:1.05:16,0,1	1/1:14,0:8:11.80:52,12,0	1/1:4,0:2:1.25:3,1,0	0/1:22,0:20:3.74:9,0,4	0/1:15,0:15:0.59:1,0,23	1/1:2,0:2:3.73:16,4,0	1/1:3,0:3:0.47:1,0,0	1/1:4,0:4:4.97:30,5,0	1/1:5,0:5:1.95:6,2,0	1/1:6,0:6:8.54:33,9,0	0/1:10,8:17:0.69:89,0,1	0/0:11,0:10:8.26:0,8,27	1/1:12,0:11:4.94:65,5,0
chr10	82713844	.	T	TGG	407.77	PASS	AB=0.931;AC=11;AF=0.196;AN=56;BaseQRankSum=-0.141;DP=284;FS=13.303;HRun=0;HaplotypeScore=50.4436;InbreedingCoeff=-0.1013;MQ=50.51;MQ0=35;MQRankSum=-4.574;QD=4.58;ReadPosRankSum=-3.428;VQSLOD=-0.4395;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:16:45.06:0,45,457	1/1:2,2:4:6.02:84,6,0	0/0:18,0:9:24.02:0,24,272	0/0:20,0:9:17.97:0,18,192	0/1:9,0:9:50.36:50,0,158	0/0:6,0:6:14.95:0,15,139	0/0:5,0:3:8.98:0,9,90	0/0:12,0:8:17.88:0,18,135	0/1:9,0:9:4.37:4,0,120	0/1:10,1:8:91.96:139,0,92	0/1:11,0:9:55.10:55,0,89	0/1:4,1:5:27.65:28,0,59	0/1:6,2:8:55.24:55,0,146	0/0:11,0:10:20.31:0,20,193	0/0:5,0:4:4.04:0,4,53	0/0:8,0:6:14.26:0,14,158	0/1:16,3:12:86.10:86,0,136	0/0:7,0:4:8.82:0,9,90	0/0:16,0:13:38.57:0,39,315	0/0:14,0:14:41.91:0,42,401	0/0:4,0:2:6.02:0,6,76	0/0:4,0:4:3.01:0,3,38	0/1:6,0:5:23.24:23,0,89	0/0:6,1:6:4.89:0,5,49	0/1:6,0:6:27.01:27,0,120	0/0:18,0:13:39.11:0,39,534	0/0:8,0:5:15.03:0,15,158	0/0:14,0:12:35.25:0,35,414
chr10	82713851	.	TTTG	T	763.35	PASS	AB=0.824;AC=10;AF=0.179;AN=56;BaseQRankSum=5.026;DP=313;FS=1.145;HRun=0;HaplotypeScore=50.4799;InbreedingCoeff=0.0048;MQ=39.70;MQ0=48;MQRankSum=-1.458;QD=7.41;ReadPosRankSum=3.523;VQSLOD=1.9838;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,9:14:51.38:283,0,51	0/0:6,0:5:8.96:0,9,88	0/0:13,0:5:2.83:0,3,60	0/1:16,0:6:8.51:9,0,41	0/0:11,0:11:26.18:0,26,275	0/0:7,0:6:16.78:0,17,112	0/1:5,1:4:22.60:57,0,23	1/1:5,1:2:3.01:40,3,0	0/0:13,0:12:30.58:0,31,199	0/0:12,0:9:26.79:0,27,246	0/0:13,0:11:14.10:0,14,147	0/0:6,0:6:12.77:0,13,97	0/0:11,0:10:22.50:0,22,155	0/0:12,0:11:25.43:0,25,198	0/0:5,0:4:8.96:0,9,80	0/0:10,0:8:23.44:0,23,154	0/0:23,0:14:16.97:0,17,202	0/0:11,0:8:20.19:0,20,143	0/1:9,5:8:99:102,0,110	0/1:7,11:17:99:295,0,107	0/0:7,0:5:11.87:0,12,108	0/1:7,0:6:7.01:7,0,41	0/0:8,0:7:0.57:0,1,82	0/1:12,0:10:0.41:7,0,0	0/0:7,0:7:12.75:0,13,115	0/0:21,0:13:36.59:0,37,372	0/1:6,3:5:30.74:99,0,31	0/0:14,0:12:34.97:0,35,368
chr10	82717449	.	CTTTTTTTTTTCTTTTTTTTT	C	1868.99	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=4.286;DP=355;FS=1.635;HRun=0;HaplotypeScore=132.1747;InbreedingCoeff=0.4733;MQ=53.40;MQ0=37;MQRankSum=-0.062;QD=17.80;ReadPosRankSum=1.140;VQSLOD=2.5411;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:18:17.45:495,17,0	0/1:4,0:4:21.68:22,0,85	0/0:42,0:8:7.28:0,7,267	0/0:54,0:9:17.15:0,17,224	0/1:8,0:8:6.06:6,0,281	0/0:12,0:12:6.31:0,6,676	1/1:0,6:6:6.02:304,6,0	1/1:10,12:23:34.68:261,35,0	0/0:10,0:8:15.01:0,15,326	0/0:4,0:4:8.94:0,9,129	0/0:16,0:16:6.09:0,6,597	0/0:6,0:6:14.93:0,15,252	0/0:2,0:2:5.69:0,6,114	0/0:3,0:2:6.02:0,6,166	0/0:10,0:10:22.95:0,23,440	0/0:7,0:6:11.85:0,12,141	0/0:15,0:15:0.85:0,1,587	0/0:7,0:6:11.94:0,12,471	1/1:7,8:13:25.01:336,25,0	1/1:2,8:11:28.09:573,28,0	0/1:2,0:2:19.79:20,0,66	0/0:4,0:3:4.69:0,5,20	0/0:6,0:5:12.03:0,12,205	0/1:4,0:4:8.66:9,0,226	0/0:15,0:15:35.96:0,36,651	0/0:25,0:21:56.95:0,57,2128	1/1:2,0:8:2.97:20,3,0	0/0:10,0:9:20.75:0,21,745
chr10	82717785	.	AG	A	5692.43	PASS	AB=0.936;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.701;DP=474;FS=14.387;HRun=12;HaplotypeScore=81.1911;InbreedingCoeff=0.3172;MQ=75.62;MQ0=2;MQRankSum=0.132;QD=12.46;ReadPosRankSum=5.517;VQSLOD=3.0636;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,10:20:29.96:203,30,0	1/1:0,6:6:11.95:93,12,0	0/1:27,2:21:53.17:53,0,60	0/1:30,0:17:24.25:24,0,64	1/1:3,8:13:25.94:192,26,0	1/1:2,11:13:26.89:209,27,0	1/1:4,10:15:28.92:215,29,0	1/1:11,10:21:11.85:93,12,0	1/1:4,17:21:41.83:325,42,0	1/1:5,14:19:38.84:301,39,0	1/1:3,10:15:31.91:238,32,0	1/1:4,7:11:20.90:162,21,0	1/1:4,5:10:16.97:122,17,0	1/1:3,18:22:52.83:400,53,0	1/1:3,6:12:24.03:157,24,0	1/1:1,12:13:32.87:255,33,0	1/1:4,19:25:60.83:449,61,0	1/1:4,9:13:15.56:195,16,0	1/1:6,6:12:20.90:161,21,0	1/1:9,8:18:28.92:214,29,0	1/1:4,10:14:23.90:186,24,0	1/1:1,11:13:31.92:237,32,0	1/1:3,12:16:28.93:214,29,0	1/1:4,11:16:28.93:215,29,0	1/1:7,12:19:35.86:278,36,0	0/0:17,0:17:8.77:0,9,54	1/1:2,24:27:64.79:493,65,0	0/1:11,1:12:9.47:9,0,59
chr10	82719661	.	T	TCTGTGTCTGG	61812.48	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-7.007;DP=636;FS=0.479;HRun=0;HaplotypeScore=175.4057;InbreedingCoeff=0.8351;MQ=69.93;MQ0=0;MQRankSum=-13.008;QD=109.40;ReadPosRankSum=4.179;VQSLOD=5.2829;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,17:39:87.13:4001,87,0	1/1:4,7:12:30.10:1468,30,0	0/0:26,0:26:66.23:0,66,1993	0/0:26,0:24:46.75:0,47,1630	1/1:9,12:21:36.08:1748,36,0	1/1:5,12:18:45.15:2332,45,0	1/1:9,10:20:54.10:2182,54,0	1/1:19,4:26:69.22:2951,69,0	1/1:7,11:18:51.09:2398,51,0	1/1:11,12:27:69.24:3128,69,0	1/1:7,8:16:21.07:1097,21,0	1/1:6,23:29:87.25:4075,87,0	1/1:13,22:35:90.31:4487,90,0	1/1:9,16:30:75.09:3482,75,0	1/1:13,20:37:87.26:4186,87,0	1/1:3,11:16:36.12:1889,36,0	1/1:8,11:20:45.15:2278,45,0	1/1:8,8:14:36.12:1726,36,0	1/1:10,5:18:45.15:1844,45,0	1/1:16,11:28:54.19:2827,54,0	1/1:8,7:18:30.10:1368,30,0	1/1:9,15:26:57.20:2942,57,0	1/1:11,11:23:45.11:2184,45,0	1/1:6,8:17:29.43:1571,29,0	1/1:5,11:18:42.14:2203,42,0	0/0:19,0:19:54.19:0,54,1738	1/1:9,14:25:66.08:3411,66,0	0/1:11,0:11:35.27:35,0,773
chr10	82721064	.	G	GT	3074.32	PASS	AB=0.722;AC=40;AF=0.714;AN=56;BaseQRankSum=-3.949;DP=429;FS=0.000;HRun=13;HaplotypeScore=44.9551;InbreedingCoeff=-0.0212;MQ=76.76;MQ0=10;MQRankSum=1.479;QD=7.61;ReadPosRankSum=1.021;VQSLOD=1.7523;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,7:16:23.15:92,0,23	0/1:4,2:7:5.53:115,0,6	0/1:55,0:15:1.95:2,0,17	0/1:37,0:15:8.17:23,0,8	1/1:4,7:10:17.97:158,18,0	1/1:6,17:24:18.02:167,18,0	0/1:5,8:13:26.12:69,0,26	1/1:20,19:38:33.18:468,33,0	1/1:0,7:7:9.01:84,9,0	1/1:1,9:10:27.01:245,27,0	1/1:1,6:7:14.81:110,15,0	1/1:5,2:8:23.86:208,24,0	0/1:4,6:10:8.37:72,0,8	1/1:4,5:9:6.01:56,6,0	1/1:4,9:14:20.70:167,21,0	1/1:1,7:8:9.01:84,9,0	0/1:10,11:22:27.26:102,0,27	0/1:7,9:17:17.22:117,0,17	1/1:16,1:25:44.17:329,44,0	0/1:5,2:8:13.61:23,0,14	1/1:2,7:9:15.02:139,15,0	0/1:3,5:8:5.57:93,0,6	0/1:3,3:8:26.31:50,0,26	1/1:1,5:7:11.85:98,12,0	1/1:1,9:10:15.02:138,15,0	0/0:14,1:15:18.33:0,18,145	0/1:9,6:15:31.40:31,0,44	0/0:10,0:10:5.72:0,6,41
chr10	82723153	.	CTT	C	25910.42	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=4.967;DP=734;FS=7.226;HRun=4;HaplotypeScore=95.0267;InbreedingCoeff=0.9994;MQ=84.46;MQ0=3;MQRankSum=-6.020;QD=40.05;ReadPosRankSum=4.678;VQSLOD=3.7220;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:93.31:1369,93,0	1/1:1,10:10:24.08:353,24,0	0/0:28,0:28:75.24:0,75,1344	0/0:16,0:16:42.14:0,42,770	1/1:1,31:32:87.29:1281,87,0	1/1:0,26:26:78.26:1148,78,0	1/1:0,19:19:54.18:795,54,0	1/1:1,38:39:99:1579,114,0	1/1:3,36:37:99:1590,108,0	1/1:1,37:38:99:1547,105,0	1/1:0,14:14:36.12:530,36,0	1/1:2,37:39:93.31:1369,93,0	1/1:0,29:29:81.27:1193,81,0	1/1:1,32:33:87.29:1281,87,0	1/1:1,32:33:96.32:1414,96,0	1/1:2,22:24:66.22:972,66,0	1/1:0,30:30:81.27:1192,81,0	1/1:0,23:23:66.22:972,66,0	1/1:1,20:21:60.20:880,60,0	1/1:2,21:23:60.20:883,60,0	1/1:1,19:20:51.17:751,51,0	1/1:0,24:24:66.22:971,66,0	1/1:1,18:19:54.18:795,54,0	1/1:0,26:26:69.23:1016,69,0	1/1:2,18:20:48.16:707,48,0	0/0:28,0:28:81.27:0,81,1483	1/1:1,31:32:90.17:1322,90,0	0/0:15,0:15:45.14:0,45,813
chr10	82724799	.	TAA	T	3861.34	PASS	AB=0.601;AC=34;AF=0.607;AN=56;BaseQRankSum=4.063;DP=513;FS=1.964;HRun=16;HaplotypeScore=70.7084;InbreedingCoeff=0.8368;MQ=72.62;MQ0=12;MQRankSum=-1.010;QD=13.13;ReadPosRankSum=7.472;VQSLOD=2.6117;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:60.12:0,60,714	1/1:2,10:12:17.77:150,18,0	0/0:34,0:16:28.97:0,29,224	0/0:22,0:12:17.50:0,18,156	0/1:6,11:19:2.97:200,0,3	1/1:8,24:32:50.72:426,51,0	0/0:5,0:5:11.40:0,11,116	0/0:16,0:20:7.67:0,8,246	1/1:3,9:13:23.93:198,24,0	1/1:4,15:19:44.23:358,44,0	1/1:6,7:14:14.31:110,14,0	0/1:7,10:19:4.18:117,0,4	1/1:2,14:18:20.64:203,21,0	1/1:2,6:8:11.96:100,12,0	1/1:5,12:17:26.91:226,27,0	1/1:1,13:14:35.85:292,36,0	1/1:6,17:24:35.64:332,36,0	1/1:6,20:28:56.27:491,56,0	0/0:23,0:23:43.34:0,43,498	0/0:19,0:24:37.17:0,37,435	1/1:2,6:8:8.96:75,9,0	1/1:1,4:5:5.92:50,6,0	1/1:4,12:17:10.99:172,11,0	1/1:3,7:10:17.90:150,18,0	1/1:3,9:15:29.14:211,29,0	0/0:24,0:29:56.60:0,57,636	0/0:16,1:24:19.51:0,20,441	0/0:10,0:11:26.42:0,26,304
chr10	82725141	.	CT	C	3886.43	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.568;DP=537;FS=6.172;HRun=6;HaplotypeScore=53.1408;InbreedingCoeff=0.9780;MQ=76.72;MQ0=0;MQRankSum=-0.616;QD=25.74;ReadPosRankSum=-0.236;VQSLOD=3.4422;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:69.17:741,69,0	0/0:5,0:5:12.04:0,12,158	0/0:15,0:13:20.40:0,20,216	0/0:15,1:16:9.07:0,9,366	0/0:27,0:27:78.25:0,78,1026	0/0:19,0:19:51.13:0,51,625	1/1:1,13:14:36.09:387,36,0	1/1:8,35:43:99:1073,105,0	0/0:23,0:23:54.15:0,54,683	0/0:26,0:26:75.23:0,75,963	0/0:27,0:27:81.22:0,81,1011	0/0:13,0:13:39.11:0,39,488	0/0:22,0:22:63.18:0,63,799	0/0:13,0:13:39.11:0,39,494	0/0:13,0:13:39.11:0,39,499	0/0:19,0:19:57.16:0,57,722	0/0:23,0:23:63.20:0,63,828	0/0:20,0:20:54.14:0,54,679	1/1:2,12:14:38.77:398,39,0	1/1:3,20:23:57.14:612,57,0	0/0:14,0:14:36.06:0,36,414	0/0:7,0:7:18.06:0,18,237	0/0:23,0:23:66.18:0,66,825	0/0:9,0:9:18.05:0,18,222	0/0:19,0:19:57.17:0,57,736	0/0:19,0:19:54.18:0,54,710	1/1:2,26:28:63.15:676,63,0	0/0:14,0:14:42.14:0,42,552
chr10	82726074	.	TTTTG	T	13158.91	PASS	AB=0.652;AC=51;AF=0.911;AN=56;BaseQRankSum=3.829;DP=638;FS=8.356;HRun=0;HaplotypeScore=123.2230;InbreedingCoeff=0.7192;MQ=61.24;MQ0=7;MQRankSum=3.030;QD=22.12;ReadPosRankSum=3.437;VQSLOD=4.3026;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:35:27.35:299,27,0	1/1:2,6:8:15.05:240,15,0	0/0:21,0:16:9.03:0,9,209	0/0:22,0:19:18.06:0,18,404	1/1:11,25:35:69.08:992,69,0	1/1:10,7:17:18.06:288,18,0	1/1:7,0:13:18.02:167,18,0	1/1:22,0:32:20.20:135,20,0	1/1:5,8:13:12.04:192,12,0	1/1:10,25:35:72.23:1128,72,0	1/1:5,14:18:30.10:479,30,0	1/1:5,14:19:33.11:527,33,0	1/1:4,14:17:24.08:384,24,0	1/1:2,18:20:54.18:863,54,0	1/1:10,13:22:36.12:575,36,0	1/1:3,7:9:18.06:288,18,0	1/1:10,19:29:48.16:767,48,0	1/1:8,15:23:39.13:623,39,0	1/1:15,0:26:27.50:252,28,0	1/1:15,0:30:38.72:347,39,0	1/1:5,14:19:30.10:479,30,0	1/1:12,15:27:33.03:471,33,0	1/1:11,23:34:63.21:1006,63,0	1/1:7,11:18:24.08:383,24,0	1/1:4,16:19:39.13:623,39,0	1/1:6,20:26:60.18:911,60,0	1/1:11,0:29:41.83:391,42,0	0/1:7,8:15:47.62:350,0,48
chr10	82726456	.	ATTTG	A	15497.86	PASS	AB=0.619;AC=47;AF=0.839;AN=56;BaseQRankSum=6.964;DP=656;FS=2.273;HRun=0;HaplotypeScore=135.7266;InbreedingCoeff=0.8653;MQ=68.78;MQ0=3;MQRankSum=-0.185;QD=26.77;ReadPosRankSum=4.650;VQSLOD=4.8425;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,13:22:31.01:526,31,0	1/1:4,8:12:18.06:289,18,0	0/0:20,0:19:15.01:0,15,287	0/0:21,0:20:15.03:0,15,361	1/1:11,25:36:69.24:1108,69,0	1/1:6,28:34:69.24:1107,69,0	1/1:6,12:18:21.07:337,21,0	1/1:20,15:35:45.14:692,45,0	1/1:4,12:17:27.09:413,27,0	1/1:6,22:28:66.23:1060,66,0	1/1:2,16:18:42.14:674,42,0	1/1:12,18:30:48.16:771,48,0	1/1:10,9:19:27.09:434,27,0	1/1:8,20:28:57.19:915,57,0	1/1:6,17:23:48.16:771,48,0	1/1:5,16:21:36.12:578,36,0	0/1:10,16:26:8.64:629,0,9	1/1:5,15:20:44.82:714,45,0	1/1:14,7:18:21.07:337,21,0	1/1:12,24:36:63.21:1011,63,0	1/1:9,10:19:21.07:337,21,0	1/1:6,15:22:46.40:725,46,0	1/1:10,19:29:35.92:578,36,0	1/1:8,9:17:19.80:335,20,0	1/1:8,11:19:27.09:434,27,0	0/0:28,0:28:45.14:0,45,1006	1/1:10,18:29:45.15:723,45,0	0/0:8,0:8:21.07:0,21,504
chr10	82728595	.	C	CGT	1228.43	PASS	AB=0.872;AC=29;AF=0.604;AN=48;BaseQRankSum=-3.143;DP=657;FS=7.896;HRun=0;HaplotypeScore=103.6503;InbreedingCoeff=-0.3567;MQ=69.06;MQ0=15;MQRankSum=0.980;QD=2.39;ReadPosRankSum=1.031;VQSLOD=1.5681;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:40:2.74:12,3,0	0/1:11,0:11:11.62:41,0,12	./.	./.	0/1:19,6:27:32.90:33,0,47	0/1:17,10:28:35.23:35,0,54	0/1:10,0:22:4.49:5,0,4	./.	1/1:12,0:12:2.99:24,3,0	1/1:21,1:23:9.48:97,9,0	0/1:8,0:7:10.94:27,0,11	0/1:31,1:32:31.58:105,0,32	1/1:17,3:20:12.43:174,12,0	0/1:17,1:23:20.13:20,0,26	0/1:11,6:18:59.57:97,0,60	1/1:8,1:16:2.75:44,3,0	0/1:18,11:30:64.24:97,0,64	0/1:15,12:27:99:191,0,120	0/0:21,0:28:20.24:0,20,92	1/1:7,0:16:0.94:2,1,0	0/1:58,0:59:41.77:42,0,56	0/1:13,4:17:29.49:29,0,95	0/1:8,1:8:11.17:38,0,11	0/1:28,1:28:67.77:68,0,121	0/0:9,0:20:17.34:0,17,102	0/1:34,0:33:13.51:133,0,14	./.	1/1:3,0:6:6.01:58,6,0
chr10	82731421	.	ACC	A	3081.83	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=7.480;DP=377;FS=2.293;HRun=2;HaplotypeScore=68.6882;InbreedingCoeff=0.8634;MQ=73.55;MQ0=21;MQRankSum=-6.161;QD=20.41;ReadPosRankSum=2.604;VQSLOD=1.8341;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.13:0,54,789	1/1:2,0:2:3.01:35,3,0	0/0:61,0:24:48.90:0,49,505	0/0:48,0:12:21.51:0,22,164	1/1:4,5:6:11.67:120,12,0	1/1:4,11:15:24.54:290,25,0	0/0:10,0:10:30.08:0,30,442	0/0:25,0:22:63.21:0,63,989	1/1:1,8:9:20.90:220,21,0	1/1:1,4:4:9.50:105,9,0	1/1:1,4:5:15:153,15,0	1/1:0,8:8:18.04:203,18,0	1/1:0,9:9:15.04:184,15,0	1/1:0,14:13:30.09:393,30,0	1/1:3,10:13:33.10:396,33,0	1/1:1,9:10:15.05:182,15,0	1/1:4,12:16:25.47:272,25,0	1/1:6,10:15:31.86:359,32,0	0/0:20,0:19:52.79:0,53,772	0/0:4,0:4:12.04:0,12,170	1/1:4,2:6:8.97:85,9,0	1/1:0,1:1:2.90:16,3,0	1/1:1,1:1:3.01:48,3,0	1/1:1,7:8:15.10:172,15,0	1/1:1,2:3:6.01:62,6,0	0/0:22,0:22:37.45:0,37,504	0/0:12,0:12:36.11:0,36,495	0/0:5,0:4:9.02:0,9,102
chr10	82731422	.	CCAA	C	1740.67	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=8.671;DP=377;FS=0.000;HRun=0;HaplotypeScore=77.7952;InbreedingCoeff=0.6279;MQ=73.60;MQ0=21;MQRankSum=-4.158;QD=11.60;ReadPosRankSum=3.686;VQSLOD=2.7732;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.17:0,57,1221	0/1:2,0:2:8.33:13,0,8	0/0:60,0:23:46.52:0,47,496	0/0:50,0:13:20.68:0,21,174	0/1:9,0:6:6.82:114,0,7	0/1:15,0:15:16.76:175,0,17	0/0:10,0:10:30.09:0,30,639	0/0:25,0:23:66.19:0,66,1295	1/1:9,0:9:6.61:91,7,0	1/1:5,0:4:4.56:65,5,0	1/1:4,0:4:11.66:71,12,0	1/1:8,0:8:17.16:114,17,0	1/1:9,0:9:13.52:111,14,0	1/1:14,0:13:25.57:195,26,0	1/1:11,2:13:29.62:259,30,0	1/1:10,0:10:2.95:75,3,0	1/1:15,1:16:7.08:154,7,0	1/1:13,3:15:8.77:258,9,0	0/0:20,0:19:54.61:0,55,997	0/0:4,0:4:12.04:0,12,255	1/1:3,3:6:8.87:73,9,0	1/1:1,0:1:1.55:4,2,0	1/1:2,0:1:1.82:5,2,0	1/1:8,0:8:6.52:96,7,0	1/1:2,1:3:5.95:65,6,0	0/0:22,0:21:60.12:0,60,654	0/0:12,0:12:36.03:0,36,678	0/0:5,0:4:9.03:0,9,114
chr10	82731423	.	CA	C	833.95	PASS	AB=0.939;AC=38;AF=0.679;AN=56;BaseQRankSum=7.042;DP=380;FS=8.251;HRun=10;HaplotypeScore=73.9364;InbreedingCoeff=0.4053;MQ=73.41;MQ0=21;MQRankSum=-3.276;QD=3.31;ReadPosRankSum=3.855;VQSLOD=-0.6388;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:53.48:0,53,554	1/1:2,0:2:1.81:5,2,0	0/1:57,2:22:8.61:9,0,159	0/0:49,1:14:14.05:0,14,123	1/1:8,0:5:0.66:7,1,0	1/1:15,0:15:17.05:53,17,0	0/0:10,0:10:23.90:0,24,246	0/0:24,0:22:51.10:0,51,538	1/1:10,0:10:1.58:43,2,0	1/1:4,0:3:6.11:17,6,0	1/1:4,0:4:7.93:22,8,0	1/1:8,0:8:11.78:33,12,0	1/1:9,0:9:7.83:21,8,0	1/1:14,0:13:11.46:36,11,0	0/1:14,0:14:1.50:32,0,2	1/1:10,0:10:10.61:34,11,0	1/1:16,0:16:11.98:39,12,0	0/1:17,0:16:0.29:24,0,0	0/0:21,0:20:14.13:0,14,366	0/1:3,1:4:14.02:14,0,88	0/1:6,0:6:1.79:4,0,2	1/1:1,0:1:2.04:6,2,0	0/0:2,0:1:1.25:0,1,3	1/1:8,0:8:9.76:28,10,0	1/1:3,0:3:4.07:12,4,0	1/1:2,20:21:56.98:491,57,0	0/1:11,2:13:18.40:18,0,257	1/1:2,3:4:5.99:52,6,0
chr10	82733121	.	GATTTATTT	G	1516.79	PASS	AB=1.000;AC=33;AF=0.917;AN=36;BaseQRankSum=-1.502;DP=226;FS=3.979;HRun=0;HaplotypeScore=61.4090;InbreedingCoeff=0.1402;MQ=52.45;MQ0=6;MQRankSum=-1.617;QD=8.43;ReadPosRankSum=1.502;VQSLOD=1.4169;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	1/1:5,6:11:3.01:75,3,0	./.	0/1:30,0:24:0:1,0,0	./.	1/1:6,3:9:5.84:95,6,0	1/1:8,2:10:2.97:20,3,0	1/1:1,3:3:3.01:75,3,0	1/1:5,0:5:3:27,3,0	1/1:4,3:7:9:170,9,0	1/1:5,2:7:3.01:75,3,0	1/1:2,3:5:6.02:149,6,0	1/1:24,0:25:14.98:191,15,0	1/1:16,0:16:6.02:149,6,0	1/1:13,0:13:3.48:56,3,0	./.	./.	./.	1/1:3,1:4:2.97:20,3,0	1/1:5,0:4:9.03:214,9,0	1/1:6,3:10:5.98:95,6,0	0/0:3,0:4:3:0,3,29	1/1:6,0:9:3.01:56,3,0	1/1:5,4:9:6.02:136,6,0
chr10	82734138	.	TTTTTGTG	T	13962.44	PASS	AB=0.765;AC=48;AF=0.857;AN=56;BaseQRankSum=4.587;DP=523;FS=4.558;HRun=0;HaplotypeScore=130.5933;InbreedingCoeff=0.6295;MQ=68.49;MQ0=3;MQRankSum=-10.101;QD=30.89;ReadPosRankSum=2.378;VQSLOD=4.5983;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,22:32:36.04:741,36,0	1/1:3,4:7:9.03:211,9,0	0/0:32,0:25:4.76:0,5,861	0/0:26,0:22:36.80:0,37,985	1/1:4,15:19:41.72:481,42,0	1/1:3,15:18:27.05:582,27,0	1/1:3,12:15:26.96:481,27,0	1/1:13,17:30:50.97:813,51,0	1/1:3,17:20:42.10:933,42,0	1/1:4,8:12:21.06:491,21,0	1/1:3,16:19:35.80:442,36,0	1/1:10,21:31:39:812,39,0	1/1:4,15:19:33.08:723,33,0	1/1:4,17:21:42.14:983,42,0	1/1:2,14:16:35.86:691,36,0	1/1:1,10:11:15.05:351,15,0	1/1:7,8:15:18.06:421,18,0	0/1:7,13:20:9.74:619,0,10	1/1:5,14:19:42.04:731,42,0	1/1:4,20:24:53.76:761,54,0	1/1:2,8:10:6.02:140,6,0	1/1:8,10:18:32.89:563,33,0	1/1:3,9:12:20.83:285,21,0	1/1:1,7:8:18.02:371,18,0	1/1:1,12:13:33.03:672,33,0	0/1:22,2:24:83.24:83,0,1706	1/1:7,12:19:27.05:582,27,0	0/0:13,0:13:27.09:0,27,769
chr10	82736136	.	T	TA	1939.06	PASS	AB=0.850;AC=15;AF=0.268;AN=56;BaseQRankSum=-5.687;DP=561;FS=0.000;HRun=13;HaplotypeScore=62.6320;InbreedingCoeff=0.3504;MQ=62.55;MQ0=7;MQRankSum=1.195;QD=7.76;ReadPosRankSum=-3.047;VQSLOD=1.6474;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,20:26:24.94:370,25,0	0/0:10,0:11:14.26:0,14,173	0/1:15,0:5:0.72:1,0,14	0/1:10,0:8:10.07:10,0,29	0/1:26,3:31:41.11:41,0,173	0/0:20,0:20:50.53:0,51,348	0/1:3,6:9:23.15:93,0,23	0/1:13,16:30:22.01:358,0,22	0/0:20,0:20:47.52:0,48,328	0/0:21,3:26:11.46:0,11,200	0/0:28,0:29:57.97:0,58,390	0/0:14,0:14:25.87:0,26,164	0/0:14,2:15:7.58:0,8,197	0/1:9,0:9:30.21:30,0,64	0/0:16,0:16:38.60:0,39,264	0/0:16,1:17:13.55:0,14,231	0/0:23,2:25:9.75:0,10,352	0/0:19,0:20:37.72:0,38,252	1/1:16,12:26:3.90:270,4,0	1/1:9,29:39:53:559,53,0	0/0:8,0:10:21.89:0,22,134	0/0:16,0:16:38.62:0,39,266	0/1:18,4:23:3.03:3,0,261	0/0:16,0:15:32.69:0,33,224	0/0:16,0:16:14.15:0,14,213	0/0:26,1:28:21.87:0,22,341	1/1:8,16:24:11.84:370,12,0	0/0:9,0:9:19.83:0,20,127
chr10	82737581	.	A	AATGTGTGTGT	9231.01	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-1.673;DP=556;FS=0.000;HRun=0;HaplotypeScore=138.4606;InbreedingCoeff=0.7849;MQ=54.17;MQ0=12;MQRankSum=-1.599;QD=19.68;ReadPosRankSum=-0.115;VQSLOD=3.8342;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:36:5.85:91,6,0	1/1:0,0:12:14.80:179,15,0	0/0:21,0:11:26.92:0,27,242	0/0:14,0:3:6:0,6,60	1/1:24,0:23:41.78:658,42,0	1/1:16,0:16:29.90:446,30,0	0/0:1,0:21:5.64:0,6,27	1/1:26,0:26:69.81:635,70,0	1/1:1,13:22:6.02:323,6,0	1/1:16,0:25:63.04:921,63,0	1/1:3,11:22:8.97:206,9,0	1/1:0,0:18:3.48:106,3,0	1/1:20,0:20:50.92:840,51,0	1/1:16,0:16:26.60:547,27,0	1/1:16,0:16:32.93:356,33,0	1/1:1,8:10:8.95:336,9,0	1/1:1,0:29:5.61:77,6,0	1/1:15,0:15:34.45:244,34,0	1/1:14,0:13:35.59:336,36,0	1/1:20,0:19:42:669,42,0	1/1:27,0:26:35.91:387,36,0	1/1:15,0:14:35.94:548,36,0	1/1:17,0:17:24.44:199,24,0	1/1:25,0:24:36.89:509,37,0	1/1:19,0:18:32.81:449,33,0	0/0:21,0:24:33.89:0,34,586	1/1:0,12:23:7.54:167,8,0	0/0:4,0:4:9:0,9,133
chr10	82739706	.	AACAC	A	1712.03	PASS	AB=0.872;AC=34;AF=0.708;AN=48;BaseQRankSum=2.560;DP=500;FS=18.813;HRun=0;HaplotypeScore=85.6553;InbreedingCoeff=0.1577;MQ=60.18;MQ0=13;MQRankSum=-1.034;QD=4.80;ReadPosRankSum=3.860;VQSLOD=0.3669;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:30:18.95:22,0,19	1/1:4,1:7:8.99:118,9,0	./.	./.	0/1:16,0:15:11.57:12,0,25	0/1:16,5:21:4.30:65,0,4	0/0:19,0:19:6.46:0,6,49	./.	0/1:17,9:26:0.56:169,0,1	1/1:9,4:14:9.03:138,9,0	0/1:12,0:12:6.67:68,0,7	1/1:8,6:14:3.01:46,3,0	1/1:6,0:6:3:26,3,0	0/1:13,2:14:1.32:104,0,1	1/1:8,0:9:9.02:103,9,0	1/1:7,4:11:4.48:89,4,0	0/1:13,8:21:5.65:180,0,6	1/1:11,1:11:8.55:70,9,0	0/1:13,0:12:0:0,0,0	1/1:13,0:18:9:79,9,0	1/1:21,7:28:6.02:92,6,0	1/1:14,8:20:0.89:89,1,0	1/1:12,3:15:8.47:137,8,0	1/1:20,2:21:18.84:195,19,0	1/1:18,6:24:3.01:46,3,0	0/0:26,0:25:23.82:0,24,443	./.	0/0:7,0:6:8.70:0,9,115
chr10	82741374	.	C	CTTGTTTGTTTGT	9615.65	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=3.162;DP=607;FS=0.476;HRun=0;HaplotypeScore=196.5199;InbreedingCoeff=0.9759;MQ=61.85;MQ0=3;MQRankSum=-10.911;QD=53.13;ReadPosRankSum=-6.719;VQSLOD=3.2519;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:45.15:1673,45,0	0/0:7,0:7:18.06:0,18,623	0/0:21,0:13:15.02:0,15,374	0/0:20,0:12:15.05:0,15,339	0/0:21,0:22:57.20:0,57,1815	0/0:18,0:18:39.13:0,39,1198	1/1:23,0:22:15.05:666,15,0	1/1:43,0:43:63.18:2365,63,0	0/0:22,0:22:30.09:0,30,962	0/0:18,0:18:24.08:0,24,779	0/0:21,0:22:48.16:0,48,1578	0/0:24,0:24:63.20:0,63,1980	0/0:18,0:18:33.11:0,33,1143	0/0:21,0:22:48.16:0,48,1534	0/0:17,0:17:36.12:0,36,1185	0/0:16,0:16:36.12:0,36,1186	0/0:22,0:22:33.11:0,33,1063	0/0:20,0:21:39.13:0,39,1296	1/1:18,1:18:24.08:986,24,0	1/1:24,7:32:42.14:1988,42,0	0/0:18,0:18:45.15:0,45,1360	0/0:25,0:25:48.13:0,48,1439	0/0:23,0:24:60.21:0,60,1882	0/0:16,0:16:30.10:0,30,1006	0/0:17,0:18:45.13:0,45,1393	0/0:23,0:25:51.17:0,51,1626	1/1:20,11:32:39.13:1938,39,0	0/0:10,0:10:9.03:0,9,312
chr10	82741906	.	A	AT	3960.99	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.628;DP=529;FS=1.748;HRun=8;HaplotypeScore=50.3944;InbreedingCoeff=0.9821;MQ=78.77;MQ0=0;MQRankSum=-0.031;QD=29.12;ReadPosRankSum=-3.059;VQSLOD=2.8633;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:75.22:866,75,0	0/0:10,0:10:30.02:0,30,275	0/0:22,0:22:16.46:0,16,267	0/0:14,0:14:12.86:0,13,140	0/0:40,0:40:99:0,108,981	0/0:19,0:19:48.02:0,48,439	1/1:1,10:11:30.09:346,30,0	1/1:3,35:38:99:1156,102,0	0/0:10,0:10:18:0,18,165	0/0:24,0:24:69.03:0,69,628	0/0:28,0:28:81.03:0,81,736	0/0:13,0:13:33:0,33,297	0/0:21,0:21:57.03:0,57,522	0/0:17,0:17:48.03:0,48,439	0/0:24,0:24:66.03:0,66,604	0/0:17,0:17:45.01:0,45,407	0/0:24,0:24:57.02:0,57,522	0/0:12,0:12:27.01:0,27,247	1/1:8,14:22:45.13:519,45,0	1/1:2,11:13:33.10:381,33,0	0/0:7,0:7:18.01:0,18,165	0/0:9,0:9:24.01:0,24,220	0/0:20,0:19:54.02:0,54,490	0/0:5,0:5:12:0,12,110	0/0:14,0:14:42.02:0,42,384	0/0:23,0:23:63.02:0,63,570	1/1:4,23:27:60.18:692,60,0	0/0:19,0:19:54.03:0,54,494
chr10	82744462	.	GTTTTGT	G	12008.43	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=7.938;DP=521;FS=2.597;HRun=0;HaplotypeScore=125.4890;InbreedingCoeff=0.7811;MQ=70.47;MQ0=1;MQRankSum=-6.628;QD=27.29;ReadPosRankSum=-0.458;VQSLOD=4.1704;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,13:24:27.03:542,27,0	1/1:8,1:9:3.01:61,3,0	0/0:26,0:23:6.02:0,6,115	0/0:22,0:17:6.02:0,6,126	1/1:13,12:25:42.14:815,42,0	1/1:10,12:22:33.11:668,33,0	1/1:8,4:12:9.03:177,9,0	1/1:20,10:30:30:393,30,0	1/1:5,9:14:39.08:712,39,0	1/1:20,13:33:48.16:978,48,0	1/1:7,9:16:30.10:607,30,0	1/1:8,7:15:30.08:543,30,0	1/1:7,11:18:36.11:689,36,0	1/1:9,9:18:27.09:542,27,0	1/1:10,5:15:24.07:438,24,0	1/1:6,8:13:27.09:546,27,0	1/1:9,4:13:18.03:331,18,0	1/1:11,3:14:15.03:262,15,0	1/1:10,9:18:27.09:534,27,0	1/1:13,8:21:24.08:486,24,0	1/1:7,3:10:6.02:121,6,0	1/1:14,9:23:33.10:638,33,0	1/1:6,11:17:33.11:668,33,0	1/1:6,2:8:3.01:55,3,0	1/1:20,4:24:27.09:534,27,0	0/0:25,0:25:10.94:0,11,1733	1/1:10,14:24:33.11:668,33,0	0/0:8,0:8:12.04:0,12,350
chr10	82744509	.	C	CT	5107.04	PASS	AC=34;AF=0.654;AN=52;BaseQRankSum=3.774;DP=477;FS=4.185;HRun=8;HaplotypeScore=102.4427;InbreedingCoeff=0.9261;MQ=36.50;MQ0=30;MQRankSum=-5.387;QD=17.55;ReadPosRankSum=4.385;VQSLOD=4.6176;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:35:60.01:0,60,549	1/1:0,3:3:6.02:69,6,0	./.	./.	1/1:8,22:28:30.01:316,30,0	1/1:5,16:20:33.10:381,33,0	0/0:8,0:9:20.04:0,20,171	0/0:23,0:20:26.97:0,27,237	1/1:4,12:16:24.03:262,24,0	1/1:7,19:27:53.99:603,54,0	1/1:5,13:19:8.73:304,9,0	1/1:4,12:15:21.06:242,21,0	1/1:4,15:19:42.08:464,42,0	1/1:4,11:15:24.07:271,24,0	1/1:5,13:17:30.09:344,30,0	1/1:3,13:15:33.10:381,33,0	1/1:8,19:23:33.10:380,33,0	1/1:2,10:11:21.06:242,21,0	0/0:21,0:20:41.98:0,42,379	0/0:17,0:17:39.01:0,39,357	0/0:5,1:4:3:0,3,27	1/1:5,8:12:12.04:138,12,0	1/1:5,8:13:15:158,15,0	1/1:2,7:8:15.04:173,15,0	1/1:1,15:16:33.10:378,33,0	0/0:29,1:29:40.39:0,40,612	0/0:20,0:20:44.93:0,45,410	0/0:6,0:6:12:0,12,110
chr10	82744787	.	T	TGG	6612.85	PASS	AB=0.740;AC=24;AF=0.429;AN=56;BaseQRankSum=8.499;DP=639;FS=0.000;HRun=0;HaplotypeScore=157.2624;InbreedingCoeff=-0.7449;MQ=50.66;MQ0=10;MQRankSum=7.250;QD=12.05;ReadPosRankSum=14.953;VQSLOD=1.9431;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,3:22:5.54:6,0,314	0/1:4,7:11:14.06:212,0,14	0/0:20,0:6:18.03:0,18,258	0/0:39,0:16:44.99:0,45,632	0/1:17,18:35:99:438,0,146	0/1:13,11:24:64.78:428,0,65	0/1:17,2:19:43.84:44,0,195	0/1:27,0:25:40.44:40,0,199	0/1:7,9:16:28.72:323,0,29	0/1:15,9:24:99:287,0,109	0/1:22,8:30:99:253,0,236	0/1:6,4:10:89.56:144,0,90	0/1:13,10:23:99:332,0,109	0/1:13,10:23:99:288,0,125	0/1:21,15:36:99:536,0,171	0/1:7,7:14:47.65:291,0,48	0/1:21,13:34:87.62:527,0,88	0/1:8,9:17:51.73:309,0,52	0/1:20,3:19:62.16:62,0,157	0/1:16,7:23:99:199,0,155	0/1:11,5:16:99:184,0,140	0/1:14,7:21:77.01:268,0,77	0/1:19,6:25:99:229,0,180	0/1:14,14:28:99:506,0,112	0/1:9,13:22:47.37:442,0,47	0/0:27,0:27:75.47:0,75,429	0/1:17,9:25:99:267,0,123	0/0:4,0:4:6.71:0,7,41
chr10	82744788	.	T	TTG	6767.65	PASS	AB=0.742;AC=24;AF=0.429;AN=56;BaseQRankSum=7.552;DP=643;FS=2.386;HRun=0;HaplotypeScore=156.3338;InbreedingCoeff=-0.7431;MQ=50.67;MQ0=10;MQRankSum=6.225;QD=12.75;ReadPosRankSum=14.524;VQSLOD=2.3835;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:23:68.47:68,0,271	0/1:4,7:11:12.21:212,0,12	0/0:19,0:6:15.04:0,15,220	0/0:37,0:15:39.10:0,39,572	0/1:16,18:34:99:398,0,172	0/1:14,11:25:64.24:431,0,64	0/1:17,0:19:99:122,0,180	0/0:27,0:25:58.51:0,59,306	0/1:9,9:18:25.68:345,0,26	0/1:15,9:24:99:329,0,136	0/1:23,8:31:99:231,0,251	0/1:7,4:11:99:120,0,108	0/1:13,10:23:99:321,0,157	0/1:13,10:23:99:317,0,132	0/1:22,15:37:99:544,0,155	0/1:7,7:14:47.62:291,0,48	0/1:21,13:34:83.89:546,0,84	0/1:8,9:17:26.83:330,0,27	0/1:21,0:19:63.99:64,0,176	0/1:16,0:23:99:223,0,152	0/1:11,5:16:99:205,0,138	0/1:14,7:21:74.26:264,0,74	0/1:17,6:23:99:184,0,217	0/1:14,14:28:99:527,0,104	0/1:9,13:22:47.72:445,0,48	0/0:27,0:27:23.96:0,24,359	0/1:17,0:25:99:240,0,174	0/1:4,0:4:12.07:12,0,47
chr10	82748986	.	G	GAGAT	4355.58	PASS	AB=0.950;AC=15;AF=0.268;AN=56;BaseQRankSum=-2.720;DP=335;FS=7.005;HRun=0;HaplotypeScore=56.5253;InbreedingCoeff=0.5536;MQ=76.09;MQ0=1;MQRankSum=-0.340;QD=29.23;ReadPosRankSum=-1.382;VQSLOD=3.5424;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:15.58:252,16,0	0/0:6,0:6:10.51:0,11,152	0/1:6,0:6:0.81:1,0,15	0/1:8,0:7:4.27:4,0,29	0/0:24,0:24:69.19:0,69,1122	0/0:15,0:15:42.10:0,42,636	1/1:2,2:4:5.99:100,6,0	1/1:10,28:39:96.51:1512,97,0	0/0:7,0:7:21.02:0,21,294	0/0:15,0:15:33.70:0,34,552	0/0:9,0:9:24.02:0,24,345	0/0:10,0:10:27.05:0,27,364	0/0:5,0:5:12.03:0,12,164	0/0:12,0:12:30.03:0,30,386	0/0:5,0:5:15.04:0,15,240	0/0:12,0:12:36.11:0,36,632	0/0:14,0:14:42.10:0,42,667	0/0:16,0:16:38.96:0,39,486	1/1:3,10:13:36.05:654,36,0	0/1:6,3:8:14.06:167,0,14	0/0:4,0:4:12.03:0,12,169	0/0:6,0:6:12.03:0,12,181	0/0:8,0:8:15.05:0,15,239	0/0:5,0:5:12.04:0,12,221	0/0:13,0:13:36.09:0,36,532	0/1:13,0:13:13.51:332,0,14	1/1:4,21:25:42.14:1059,42,0	0/1:11,0:11:43.93:275,0,44
chr10	82748990	.	T	TAG	2049.24	PASS	AB=0.957;AC=15;AF=0.268;AN=56;BaseQRankSum=2.188;DP=324;FS=5.491;HRun=0;HaplotypeScore=46.7702;InbreedingCoeff=0.2950;MQ=71.08;MQ0=2;MQRankSum=0.650;QD=13.85;ReadPosRankSum=0.549;VQSLOD=2.5617;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:29.66:705,30,0	0/1:6,0:6:5.19:5,0,158	0/1:3,0:3:0.80:1,0,15	0/1:8,0:6:0.96:1,0,33	0/0:24,0:24:69.15:0,69,968	0/0:15,0:15:42.04:0,42,550	1/1:3,1:4:6.02:88,6,0	0/1:32,0:32:66.23:657,0,66	0/1:8,0:8:0.67:1,0,232	0/0:17,0:17:10.53:0,11,572	0/0:8,0:8:23.90:0,24,290	0/0:10,0:10:26.94:0,27,295	0/0:6,0:6:11.96:0,12,135	0/0:12,0:12:33.04:0,33,391	0/0:6,0:6:18.03:0,18,233	0/0:13,0:13:39.11:0,39,554	0/0:14,0:14:41.99:0,42,542	0/0:16,0:16:38.95:0,39,446	0/1:11,1:12:87.18:249,0,87	0/1:5,4:8:0.44:107,0,0	0/0:4,0:4:11.97:0,12,135	0/0:7,0:7:15.01:0,15,187	0/0:7,0:7:17.99:0,18,225	0/0:4,0:4:12.04:0,12,183	0/0:13,0:13:35.98:0,36,436	0/1:12,0:12:13.02:13,0,63	1/1:22,0:22:36.07:360,36,0	0/1:11,0:11:19.60:20,0,55
chr10	82749326	.	AAC	A	5034.60	PASS	AB=0.752;AC=43;AF=0.796;AN=54;BaseQRankSum=7.934;DP=529;FS=5.741;HRun=0;HaplotypeScore=105.9542;InbreedingCoeff=0.1521;MQ=61.89;MQ0=6;MQRankSum=0.821;QD=10.55;ReadPosRankSum=3.833;VQSLOD=4.3440;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:32:14.83:143,15,0	0/1:3,4:8:30.92:100,0,31	0/0:20,0:13:5.95:0,6,56	0/0:28,0:24:26.24:0,26,369	1/1:8,10:20:26.82:250,27,0	0/1:11,7:20:18.94:193,0,19	1/1:10,0:22:15.43:148,15,0	0/1:20,0:24:47.67:62,0,48	1/1:7,11:18:24.07:270,24,0	1/1:8,12:23:24.69:451,25,0	1/1:10,3:14:14.87:149,15,0	1/1:8,10:18:33.09:372,33,0	1/1:4,10:16:22.63:195,23,0	1/1:9,3:13:11.86:115,12,0	0/1:12,10:24:13.03:265,0,13	1/1:7,9:16:27.06:289,27,0	1/1:19,3:25:10.60:249,11,0	1/1:4,3:8:14.88:149,15,0	./.	1/1:7,0:16:21.13:101,21,0	0/1:18,14:34:14.61:422,0,15	1/1:7,6:14:26.87:270,27,0	1/1:4,7:12:11.70:115,12,0	1/1:9,6:16:26.12:258,26,0	1/1:8,7:15:14.94:152,15,0	0/1:20,1:21:17.33:17,0,439	1/1:15,0:28:45.61:235,46,0	0/1:13,3:17:64.38:64,0,503
chr10	82749386	.	TGTTTG	T	3169.28	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.448;DP=595;FS=11.800;HRun=0;HaplotypeScore=168.7371;InbreedingCoeff=0.9908;MQ=61.42;MQ0=3;MQRankSum=-9.674;QD=21.56;ReadPosRankSum=-5.303;VQSLOD=1.1596;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:5,29:35:45.02:708,45,0	0/0:15,0:15:45.14:0,45,1204	0/0:28,0:19:28.77:0,29,758	0/0:14,0:12:11.95:0,12,419	0/0:22,0:22:66.01:0,66,1779	0/0:16,0:16:45.07:0,45,1217	1/1:4,20:24:33.11:614,33,0	1/1:20,3:36:71.33:880,71,0	0/0:14,0:14:17.40:0,17,839	0/0:22,0:21:63.12:0,63,1438	0/0:23,0:23:62.39:0,62,1710	0/0:18,0:18:29.04:0,29,1118	0/0:19,0:19:37.71:0,38,1262	0/0:14,0:14:31.72:0,32,855	0/0:41,0:41:95.17:0,95,2604	0/0:14,0:14:41.21:0,41,882	0/0:28,0:28:84.29:0,84,2266	0/0:14,0:14:30.01:0,30,565	1/1:11,0:16:31.73:366,32,0	1/1:8,0:13:28.42:306,28,0	0/0:25,0:25:55.19:0,55,1785	0/0:25,0:25:64.35:0,64,1521	0/0:21,0:21:59.94:0,60,1662	0/0:18,0:18:50.69:0,51,1172	0/0:12,0:12:30.10:0,30,758	0/0:32,0:32:85.35:0,85,2528	1/1:17,1:23:31.44:483,31,0	0/0:12,0:12:36.07:0,36,773
chr10	82749389	.	TTG	T	1417.55	PASS	AB=0.917;AC=12;AF=0.214;AN=56;BaseQRankSum=7.179;DP=589;FS=4.375;HRun=0;HaplotypeScore=136.7465;InbreedingCoeff=0.8079;MQ=65.56;MQ0=2;MQRankSum=-9.595;QD=8.80;ReadPosRankSum=-3.808;VQSLOD=2.8073;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,1:34:32.06:244,32,0	0/0:17,0:17:48.16:0,48,869	0/0:31,0:22:47.58:0,48,721	0/1:18,0:16:2.57:3,0,375	0/0:23,0:23:66.18:0,66,1197	0/0:16,0:16:48.16:0,48,891	1/1:24,0:24:24.96:214,25,0	1/1:28,5:33:31.13:456,31,0	0/0:16,0:16:39:0,39,641	0/0:21,0:20:60.18:0,60,1022	0/0:23,0:23:60.07:0,60,1129	0/0:17,0:17:22.61:0,23,781	0/0:17,0:17:45.15:0,45,839	0/0:14,0:14:37.55:0,38,686	0/0:38,0:38:99:0,99,1834	0/0:16,0:16:48.11:0,48,762	0/0:29,0:29:87.28:0,87,1588	0/0:14,0:14:27.07:0,27,447	0/1:12,3:15:15.70:189,0,16	1/1:12,2:14:20.67:179,21,0	0/0:25,0:25:71.13:0,71,1275	0/0:21,0:21:58.43:0,58,1037	0/0:20,0:20:60.21:0,60,1126	0/0:16,0:16:45.15:0,45,829	0/0:12,0:12:28.34:0,28,504	0/0:33,0:33:93.28:0,93,1696	1/1:21,2:23:8.68:307,9,0	0/0:9,0:9:27.09:0,27,480
chr10	82749390	.	TG	T	1337.10	PASS	AB=0.875;AC=11;AF=0.196;AN=56;BaseQRankSum=8.563;DP=583;FS=1.482;HRun=1;HaplotypeScore=124.0901;InbreedingCoeff=0.8725;MQ=65.75;MQ0=2;MQRankSum=-11.126;QD=9.69;ReadPosRankSum=-4.099;VQSLOD=-0.1510;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:39.34:238,39,0	0/0:18,0:18:51.13:0,51,714	0/0:31,0:22:49.69:0,50,607	0/0:16,2:16:18.27:0,18,320	0/0:23,0:23:66.09:0,66,972	0/0:16,0:16:48.13:0,48,707	1/1:24,0:24:29.88:192,30,0	1/1:25,7:32:18.85:410,19,0	0/0:14,0:14:38.79:0,39,482	0/0:21,0:20:59.55:0,60,829	0/0:23,0:23:59.98:0,60,915	0/0:17,0:17:22.49:0,22,596	0/0:17,0:17:45.15:0,45,669	0/0:14,0:14:35.66:0,36,514	0/0:38,0:38:99:0,99,1480	0/0:17,0:17:49.32:0,49,621	0/0:29,0:29:87.28:0,87,1286	0/0:14,0:14:14.74:0,15,347	0/1:12,2:14:30.23:153,0,30	1/1:9,3:12:26.88:181,27,0	0/0:25,0:25:70.53:0,71,1027	0/0:22,0:22:61.41:0,61,851	0/0:20,0:20:60.20:0,60,908	0/0:16,0:16:45.15:0,45,674	0/0:12,0:12:24.14:0,24,407	0/0:31,0:31:93.27:0,93,1375	1/1:19,3:22:12.56:340,13,0	0/0:9,0:9:27.09:0,27,405
chr10	82752722	.	CCTTTCTCTCT	C	4862.44	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=1.542;DP=509;FS=11.585;HRun=0;HaplotypeScore=144.1729;InbreedingCoeff=0.4368;MQ=72.36;MQ0=22;MQRankSum=-0.693;QD=15.49;ReadPosRankSum=2.162;VQSLOD=3.2976;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:20:99:275,0,159	1/1:2,0:2:5.99:48,6,0	0/0:25,0:13:30.04:0,30,314	0/0:49,0:29:61.77:0,62,592	1/1:17,0:17:44.90:361,45,0	0/0:0,12:13:0.89:0,1,2	0/0:22,0:21:62.66:0,63,494	0/0:26,0:26:68.42:0,68,612	1/1:17,0:17:35.39:449,35,0	0/1:19,0:19:99:367,0,155	1/1:7,0:7:0:104,0,0	1/1:9,0:9:11.87:120,12,0	1/1:15,0:15:15.17:262,15,0	1/1:16,0:16:37.06:336,37,0	1/1:17,0:17:41.91:341,42,0	1/1:17,0:17:47.91:393,48,0	0/1:12,0:10:73.62:74,0,84	1/1:9,0:9:1.98:185,2,0	0/0:16,0:15:29.81:0,30,274	0/0:24,0:22:56.63:0,57,540	1/1:20,0:18:17.95:236,18,0	1/1:20,0:20:33.52:361,34,0	1/1:12,0:12:26.96:222,27,0	0/1:32,0:29:99:255,0,112	1/1:8,0:8:20.97:174,21,0	0/1:28,0:25:99:246,0,387	0/0:20,0:20:16.89:0,17,359	0/1:16,0:15:55.50:55,0,218
chr10	82752725	.	TTCTCTCTCTCTCTCTCTC	T	1134.97	PASS	AB=0.730;AC=3;AF=0.065;AN=46;BaseQRankSum=3.057;DP=529;FS=12.327;HRun=0;HaplotypeScore=226.0532;InbreedingCoeff=0.2033;MQ=68.65;MQ0=29;MQRankSum=-1.844;QD=25.79;ReadPosRankSum=0.078;VQSLOD=1.5152;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:21.09:0,21,293	./.	./.	0/0:47,0:27:6.91:0,7,91	./.	0/0:14,0:13:3.01:0,3,99	0/0:24,0:22:1.55:0,2,4	0/0:26,0:26:10.85:0,11,322	0/0:17,0:17:15.05:0,15,414	0/0:25,0:25:24.14:0,24,1280	0/0:8,0:8:3.01:0,3,143	0/0:11,0:11:3.01:0,3,132	0/0:15,0:15:13.86:0,14,468	0/0:16,0:16:12.02:0,12,313	0/0:17,0:17:3.01:0,3,109	0/0:18,0:17:9.02:0,9,233	0/0:13,0:11:15.05:0,15,675	0/0:9,0:9:12.04:0,12,388	0/0:18,0:17:14.69:0,15,207	0/0:19,0:19:3.48:0,3,162	0/0:21,0:19:6.02:0,6,250	0/0:23,0:22:3.01:0,3,139	./.	0/0:36,0:31:18.95:0,19,865	./.	0/1:17,8:24:99:953,0,197	0/0:17,0:17:12.03:0,12,282	1/1:12,4:15:6.02:273,6,0
chr10	82752776	.	TCA	T	829.97	PASS	AB=0.750;AC=31;AF=0.646;AN=48;BaseQRankSum=0.195;DP=414;FS=20.495;HRun=0;HaplotypeScore=86.7105;InbreedingCoeff=0.5966;MQ=39.64;MQ0=59;MQRankSum=3.857;QD=3.33;ReadPosRankSum=-0.185;VQSLOD=0.6158;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:21:0.95:0,1,72	1/1:4,0:4:5.95:42,6,0	./.	./.	1/1:8,0:8:0.89:2,1,0	1/1:21,0:19:11.83:78,12,0	0/0:23,0:20:9.16:0,9,66	0/0:21,0:18:2.92:0,3,17	1/1:13,0:12:7.73:44,8,0	1/1:12,0:17:19.89:117,20,0	0/1:4,0:4:0:1,0,0	1/1:8,7:14:2.76:15,3,0	1/1:10,0:9:14.79:98,15,0	1/1:10,0:7:2.94:18,3,0	1/1:21,0:19:23.62:168,24,0	1/1:8,0:7:5.89:37,6,0	1/1:22,0:18:13.73:87,14,0	1/1:12,0:10:11.86:79,12,0	0/0:12,0:9:7.22:0,7,51	./.	1/1:28,0:19:8.17:48,8,0	./.	0/0:3,0:6:0:0,0,0	1/1:38,0:31:19.53:130,20,0	1/1:4,7:11:2.77:15,3,0	0/0:27,0:22:31.43:0,31,204	0/0:15,0:15:3.88:0,4,54	0/0:11,0:9:5.92:0,6,41
chr10	82754326	.	A	ATT	11230.35	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-12.343;DP=546;FS=2.149;HRun=9;HaplotypeScore=57.1466;InbreedingCoeff=0.9866;MQ=71.07;MQ0=2;MQRankSum=-0.301;QD=32.93;ReadPosRankSum=1.713;VQSLOD=5.0524;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:65.81:0,66,902	1/1:1,6:7:15.01:204,15,0	0/0:9,0:8:11.55:0,12,121	0/0:9,0:9:11.92:0,12,127	1/1:6,25:34:80.24:1155,80,0	1/1:3,24:26:57.19:878,57,0	0/0:14,0:14:39.07:0,39,407	0/0:33,0:33:66.09:0,66,695	1/1:1,12:15:35.09:479,35,0	1/1:2,23:25:69.15:940,69,0	1/1:3,9:13:29.54:398,30,0	1/1:2,20:25:50.66:747,51,0	1/1:1,20:21:54.17:809,54,0	1/1:4,11:16:24.08:370,24,0	1/1:5,15:21:41.63:609,42,0	1/1:2,22:25:51.13:752,51,0	1/1:4,16:20:45.15:693,45,0	1/1:1,14:15:39.13:600,39,0	0/0:19,0:19:45.10:0,45,479	0/0:25,0:25:69.16:0,69,733	1/1:1,15:17:44.64:655,45,0	1/1:1,8:9:21.07:323,21,0	1/1:4,15:20:39.60:602,40,0	1/1:0,14:15:30.10:462,30,0	1/1:0,16:16:36.12:554,36,0	0/0:26,0:26:69.13:0,69,726	0/0:21,0:19:60.13:0,60,630	0/0:12,0:12:33.08:0,33,351
chr10	82754657	.	T	TA	12005.94	PASS	AB=0.566;AC=46;AF=0.821;AN=56;BaseQRankSum=-7.015;DP=616;FS=0.000;HRun=10;HaplotypeScore=58.0923;InbreedingCoeff=0.6816;MQ=71.06;MQ0=0;MQRankSum=-0.923;QD=21.36;ReadPosRankSum=-1.200;VQSLOD=5.1933;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:29:44.54:673,45,0	1/1:2,7:10:20.92:203,21,0	0/0:8,0:8:5.93:0,6,49	0/0:8,0:9:5.96:0,6,49	1/1:13,26:39:75.32:821,75,0	1/1:6,23:29:44.95:459,45,0	1/1:2,14:16:27.07:286,27,0	1/1:8,25:34:68.93:679,69,0	1/1:5,20:25:52.37:543,52,0	1/1:9,24:33:76.02:765,76,0	1/1:3,12:16:38.93:394,39,0	1/1:6,18:24:29.50:516,29,0	1/1:4,24:28:57.14:603,57,0	1/1:3,11:14:30.08:318,30,0	1/1:2,13:16:17.46:383,17,0	1/1:1,16:17:36.09:381,36,0	0/1:4,21:25:13.75:480,0,14	1/1:2,18:20:39.10:413,39,0	1/1:2,18:20:54.07:535,54,0	1/1:5,23:28:28.54:591,29,0	1/1:4,17:21:7.89:491,8,0	1/1:2,18:21:53.97:554,54,0	1/1:3,22:25:50.93:539,51,0	1/1:0,18:18:45.11:477,45,0	1/1:5,15:20:36.09:381,36,0	0/0:31,1:32:49.09:0,49,604	0/1:10,23:33:7.77:523,0,8	0/0:5,0:5:8.99:0,9,74
chr10	82757706	.	T	TA	7332.58	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=16.219;DP=789;FS=5.863;HRun=2;HaplotypeScore=88.2803;InbreedingCoeff=0.9993;MQ=63.93;MQ0=0;MQRankSum=1.352;QD=37.99;ReadPosRankSum=-1.018;VQSLOD=4.7056;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,41:44:99:1682,117,0	0/0:11,0:11:33.09:0,33,396	0/0:27,0:20:54.14:0,54,646	0/0:25,0:22:62.98:0,63,737	0/0:30,0:30:84.25:0,84,1028	0/0:23,0:23:69.21:0,69,844	1/1:2,26:28:72.24:1036,72,0	1/1:1,32:33:96.28:1325,96,0	0/0:30,0:30:87.24:0,87,1043	0/0:40,0:39:99:0,114,1381	0/0:26,0:25:72.23:0,72,892	0/0:19,0:19:57.18:0,57,706	0/0:39,0:39:99:0,111,1338	0/0:19,0:19:57.18:0,57,705	0/0:38,0:38:99:0,114,1375	0/0:46,0:46:99:0,117,1427	0/0:25,0:25:75.22:0,75,917	0/0:22,0:22:63.13:0,63,737	1/1:4,19:23:57.16:799,57,0	1/1:1,26:27:75.15:1023,75,0	0/0:26,0:26:78.23:0,78,953	0/0:25,0:25:72.19:0,72,855	0/0:40,0:40:99:0,114,1357	0/0:30,0:30:87.23:0,87,1047	0/0:23,0:23:69.21:0,69,843	0/0:24,0:24:72.22:0,72,880	1/1:1,37:38:99:1467,102,0	0/0:8,0:8:21.95:0,22,259
chr10	82758896	.	TGTCC	T	32167.62	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=3.159;DP=702;FS=6.596;HRun=0;HaplotypeScore=139.6722;InbreedingCoeff=0.9998;MQ=84.57;MQ0=0;MQRankSum=-9.098;QD=53.35;ReadPosRankSum=4.956;VQSLOD=6.1193;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:78.27:1634,78,0	1/1:0,19:19:57.20:1192,57,0	0/0:34,0:34:95.81:0,96,2446	0/0:18,0:18:47.19:0,47,1102	1/1:0,17:17:36.12:745,36,0	1/1:0,31:31:84.29:1760,84,0	1/1:0,25:25:60.21:1257,60,0	1/1:0,43:43:99:2485,129,0	1/1:0,22:22:63.22:1315,63,0	1/1:0,31:31:93.32:1945,93,0	1/1:0,10:10:30.10:628,30,0	1/1:0,30:30:75.26:1570,75,0	1/1:0,29:29:81.28:1697,81,0	1/1:0,25:25:63.22:1319,63,0	1/1:0,35:35:93.32:1948,93,0	1/1:0,25:25:51.18:1069,51,0	1/1:0,29:29:69.22:1446,69,0	1/1:0,18:18:45.15:935,45,0	1/1:0,15:15:45.15:927,45,0	1/1:0,23:23:63.22:1320,63,0	1/1:0,22:22:36.12:754,36,0	1/1:0,29:29:69.24:1445,69,0	1/1:0,24:24:60.21:1256,60,0	1/1:0,30:30:69.71:1446,70,0	1/1:0,18:18:42.14:880,42,0	0/0:33,0:33:99:0,99,2714	1/1:0,24:24:57.20:1194,57,0	0/0:14,0:14:42.14:0,42,1094
chr10	82759162	.	CT	C	1593.60	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.610;DP=701;FS=4.345;HRun=12;HaplotypeScore=81.6717;InbreedingCoeff=0.9320;MQ=67.95;MQ0=2;MQRankSum=1.678;QD=13.39;ReadPosRankSum=-0.600;VQSLOD=3.7809;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:32:61.89:0,62,768	0/0:17,2:18:9.45:0,9,276	0/0:21,1:15:11.77:0,12,214	0/0:16,2:18:3.92:0,4,111	0/0:25,0:27:43.64:0,44,580	0/0:24,0:24:48.09:0,48,482	0/0:21,1:27:26.85:0,27,463	1/1:11,29:40:81.88:611,82,0	0/0:20,0:20:19.68:0,20,358	0/0:33,1:35:57.68:0,58,730	0/0:13,0:14:33.37:0,33,320	0/0:23,0:24:62.86:0,63,598	0/0:30,1:31:37.55:0,38,519	0/0:21,1:22:33.74:0,34,505	0/0:26,1:28:32.97:0,33,661	0/0:27,0:27:63.12:0,63,633	0/0:28,1:29:60.91:0,61,791	0/0:16,0:16:39.05:0,39,381	1/1:6,12:18:35.82:277,36,0	1/1:7,18:25:55.48:425,55,0	0/0:26,3:29:16.62:0,17,517	0/0:32,1:34:35.16:0,35,641	0/0:24,0:24:49.17:0,49,494	0/0:21,0:21:44.11:0,44,421	0/0:21,3:24:32.33:0,32,478	0/0:18,0:18:45.01:0,45,436	1/1:11,25:36:56.39:440,56,0	0/0:16,0:16:42.08:0,42,426
chr10	82759657	.	T	TCTTTTCCCTTTTCC	13528.51	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-0.407;DP=801;FS=0.886;HRun=0;HaplotypeScore=289.1636;InbreedingCoeff=0.8652;MQ=68.89;MQ0=0;MQRankSum=-11.918;QD=56.37;ReadPosRankSum=-7.726;VQSLOD=2.0261;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:29,13:43:57.20:3254,57,0	0/0:10,0:10:24.08:0,24,939	0/0:34,0:27:8.95:0,9,85	0/1:23,0:20:18.48:18,0,129	0/0:27,0:27:63.21:0,63,2188	0/0:18,0:18:33.11:0,33,1245	1/1:24,3:29:12.04:587,12,0	1/1:41,0:41:33.07:1246,33,0	0/0:31,0:31:63.22:0,63,2226	0/0:30,0:30:63.22:0,63,2210	0/0:17,0:17:39.13:0,39,1440	0/0:27,0:27:42.14:0,42,1647	0/0:29,0:29:63.20:0,63,2248	0/0:27,0:27:66.23:0,66,2436	0/0:41,0:41:87.27:0,87,3116	0/0:40,0:40:84.29:0,84,3104	0/0:28,0:28:33.10:0,33,1101	0/0:28,0:28:48.13:0,48,1785	1/1:20,4:25:39.13:1567,39,0	1/1:23,16:45:78.18:4223,78,0	0/0:31,0:31:57.19:0,57,2040	0/0:25,0:25:60.21:0,60,2153	0/0:23,0:23:51.16:0,51,1769	0/0:30,0:30:57.20:0,57,2082	0/0:23,0:23:48.16:0,48,1780	0/0:29,0:29:72.25:0,72,2617	1/1:27,6:34:48.16:2633,48,0	0/0:13,0:13:6.02:0,6,235
chr10	82765343	.	TGG	T	8381.36	PASS	AB=0.684;AC=45;AF=0.804;AN=56;BaseQRankSum=-7.920;DP=598;FS=7.072;HRun=12;HaplotypeScore=88.1343;InbreedingCoeff=0.1930;MQ=76.89;MQ0=2;MQRankSum=-1.642;QD=15.18;ReadPosRankSum=5.082;VQSLOD=3.6207;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:23.54:0,24,279	1/1:4,8:14:29.52:268,30,0	0/0:24,0:20:24.39:0,24,392	0/1:17,0:17:29.66:30,0,82	1/1:6,11:17:27.01:275,27,0	1/1:5,22:27:66.14:671,66,0	0/1:11,5:30:64.84:84,0,65	0/1:14,7:21:55.02:96,0,55	1/1:4,12:16:36.07:366,36,0	1/1:7,12:19:35.77:347,36,0	1/1:3,14:17:33.05:336,33,0	1/1:3,19:24:56.60:542,57,0	1/1:6,16:23:44.81:436,45,0	1/1:6,19:26:50.84:500,51,0	1/1:5,18:24:53.84:530,54,0	1/1:4,13:17:36.04:366,36,0	1/1:3,27:30:69.13:702,69,0	1/1:1,23:26:56.60:613,57,0	0/1:9,2:17:36.60:37,0,50	0/1:5,2:19:32.20:32,0,61	1/1:8,14:24:44.50:409,45,0	1/1:6,14:20:35.98:352,36,0	1/1:9,13:22:33.91:337,34,0	1/1:7,17:26:36.83:545,37,0	1/1:3,14:19:41.49:389,41,0	1/1:18,3:22:2.67:82,3,0	0/1:7,2:23:22.08:22,0,89	0/1:3,1:11:14.53:15,0,43
chr10	82767753	.	TAC	T	2076.62	PASS	AB=0.976;AC=22;AF=0.393;AN=56;BaseQRankSum=6.121;DP=580;FS=7.148;HRun=0;HaplotypeScore=108.9681;InbreedingCoeff=-0.3033;MQ=70.52;MQ0=2;MQRankSum=0.025;QD=4.55;ReadPosRankSum=13.100;VQSLOD=-0.4694;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:45:0,45,468	0/1:9,1:10:22.81:58,0,23	0/1:12,0:11:13.83:14,0,161	0/1:9,0:8:0.86:1,0,86	0/1:11,1:12:14.17:92,0,14	0/1:17,0:17:41.89:53,0,42	0/0:31,0:31:71.89:0,72,917	0/0:11,0:11:32.95:0,33,406	0/1:21,1:21:5.28:123,0,5	0/1:11,0:11:22.68:34,0,23	0/1:12,0:12:18.44:68,0,18	0/1:33,2:35:44.02:204,0,44	1/1:16,0:16:10.50:73,10,0	0/1:36,0:35:99:183,0,138	0/1:26,0:26:40.98:130,0,41	0/1:27,0:27:67.28:101,0,67	0/1:32,2:34:53.31:196,0,53	0/1:32,0:32:5:158,0,5	0/0:17,0:17:0.19:0,0,327	0/0:11,0:11:28.29:0,28,401	0/1:52,4:57:99:236,0,194	0/1:16,0:16:15.85:84,0,16	1/1:9,0:9:21.62:101,22,0	0/1:40,1:41:20.67:241,0,21	0/1:22,0:22:35.73:91,0,36	0/0:13,0:14:32.43:0,32,319	0/0:15,0:15:37.68:0,38,442	0/0:6,0:6:17.97:0,18,243
chr10	82767754	.	ACC	A	9600.34	PASS	AB=0.914;AC=39;AF=0.696;AN=56;BaseQRankSum=-8.686;DP=580;FS=2.241;HRun=11;HaplotypeScore=85.3456;InbreedingCoeff=0.7398;MQ=69.71;MQ0=2;MQRankSum=-0.445;QD=20.47;ReadPosRankSum=8.520;VQSLOD=3.6864;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:20:20.99:0,21,200	1/1:3,6:10:23.75:224,24,0	0/1:8,1:10:15.63:16,0,125	0/1:8,0:8:16.24:16,0,52	1/1:2,10:12:24.04:255,24,0	1/1:3,13:17:35.81:363,36,0	0/0:19,0:32:47.91:0,48,535	0/0:11,0:11:23.05:0,23,289	1/1:2,19:20:45.09:479,45,0	1/1:1,7:11:26.54:247,27,0	1/1:3,9:12:23.45:254,23,0	1/1:7,25:35:80.39:802,80,0	1/1:0,15:15:32.89:351,33,0	1/1:8,27:35:43.71:677,44,0	1/1:4,21:26:55.91:585,56,0	1/1:5,22:27:51.11:543,51,0	1/1:8,26:34:78.18:830,78,0	1/1:3,27:31:77.93:810,78,0	0/1:15,1:17:47.55:48,0,87	0/0:11,0:11:23.75:0,24,325	1/1:17,37:57:86.69:1071,87,0	1/1:3,13:16:28.68:317,29,0	1/1:0,9:9:24.06:255,24,0	1/1:6,34:41:98.97:1029,99,0	1/1:3,17:22:41.82:427,42,0	0/0:12,0:15:16.47:0,16,128	0/0:16,0:16:28.66:0,29,346	0/0:5,0:6:11.53:0,12,143
chr10	82771697	.	GCACACACACACACACACACACACACACACA	G	4810.52	PASS	AB=0.752;AC=25;AF=0.500;AN=50;BaseQRankSum=4.891;DP=466;FS=4.029;HRun=0;HaplotypeScore=282.3251;InbreedingCoeff=0.5646;MQ=58.15;MQ0=25;MQRankSum=-1.447;QD=19.63;ReadPosRankSum=1.414;VQSLOD=3.2571;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:33.11:0,33,1392	./.	0/0:18,0:8:3:0,3,66	0/0:34,0:17:3.01:0,3,65	1/1:10,0:10:6.47:53,6,0	1/1:18,0:17:8.93:96,9,0	0/0:17,0:16:9.50:0,10,380	0/0:20,0:20:29.94:0,30,685	1/1:13,0:14:12.03:365,12,0	1/1:16,0:13:6.12:311,6,0	1/1:7,3:11:8.59:333,9,0	0/1:13,8:21:3.13:1313,0,3	1/1:14,0:14:3.01:63,3,0	1/1:12,0:11:6.01:143,6,0	1/1:24,7:31:9.02:687,9,0	0/1:14,0:25:10.90:992,0,11	0/1:19,4:22:4.09:222,0,4	./.	0/0:14,0:14:9.03:0,9,399	0/0:6,0:5:9.50:0,10,387	1/1:30,0:24:8.97:107,9,0	./.	1/1:7,0:7:9:105,9,0	0/0:27,0:24:5.60:0,6,404	1/1:12,0:11:2.96:20,3,0	0/0:12,0:11:21.06:0,21,877	0/0:16,0:18:33.11:0,33,1355	0/0:6,0:6:13.60:0,14,712
chr10	82772597	.	T	TTA	18243.65	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-15.832;DP=618;FS=0.315;HRun=0;HaplotypeScore=64.9088;InbreedingCoeff=0.9992;MQ=88.87;MQ0=1;MQRankSum=-4.158;QD=47.63;ReadPosRankSum=6.200;VQSLOD=6.2408;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,1680	1/1:2,6:9:21.07:367,21,0	0/0:25,0:25:66.22:0,66,930	0/0:23,0:23:60.15:0,60,816	1/1:0,24:25:69.24:1264,69,0	1/1:0,19:19:51.17:917,51,0	0/0:19,0:19:54.18:0,54,774	0/0:37,0:37:99:0,99,1385	1/1:0,18:18:51.17:934,51,0	1/1:4,31:35:90.31:1635,90,0	1/1:3,17:20:39.13:714,39,0	1/1:1,27:27:72.25:1303,72,0	1/1:2,17:19:43.03:772,43,0	1/1:1,19:20:51.17:934,51,0	1/1:1,24:25:66.23:1210,66,0	1/1:1,26:27:75.26:1375,75,0	1/1:0,29:29:87.30:1595,87,0	1/1:0,13:13:36.12:660,36,0	0/0:17,0:17:45.15:0,45,645	0/0:12,0:12:33.10:0,33,455	1/1:2,21:23:54.19:990,54,0	1/1:1,15:16:45.15:824,45,0	1/1:1,22:23:62.76:1155,63,0	1/1:0,17:17:48.16:880,48,0	1/1:2,14:17:39.13:715,39,0	0/0:25,0:25:66.22:0,66,946	0/0:23,0:23:69.19:0,69,948	0/0:11,0:11:27.09:0,27,387
chr10	82772800	.	TTGG	T	138.40	PASS	AB=0.975;AC=20;AF=0.370;AN=54;BaseQRankSum=6.900;DP=339;FS=11.015;HRun=0;HaplotypeScore=59.7281;InbreedingCoeff=0.1033;MQ=70.31;MQ0=2;MQRankSum=-2.383;QD=1.04;ReadPosRankSum=2.073;VQSLOD=0.4219;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:19:11.34:0,11,151	1/1:5,0:5:4.41:15,4,0	0/0:24,0:13:29.98:0,30,371	0/1:10,0:7:20.39:20,0,50	./.	0/1:9,0:9:4.28:4,0,36	0/1:11,2:13:43.93:55,0,44	0/0:14,0:14:9.34:0,9,142	1/1:9,0:9:4.43:18,4,0	0/0:10,1:10:2.89:0,3,50	0/1:11,0:11:12.99:13,0,29	0/1:13,1:14:36.89:37,0,77	0/1:11,0:11:24.91:25,0,32	1/1:6,0:6:0.47:1,0,0	0/1:9,0:9:17.17:17,0,74	0/0:23,0:23:7.61:0,8,122	0/0:19,0:19:7.09:0,7,105	0/0:15,0:15:12.02:0,12,78	0/0:18,0:18:21.23:0,21,255	1/1:6,0:6:2.74:19,3,0	0/0:20,0:20:21.98:0,22,184	0/0:7,0:7:8.57:0,9,70	1/1:11,0:11:2.92:20,3,0	0/0:17,0:17:7.76:0,8,53	0/0:6,0:6:5.61:0,6,69	0/1:16,0:16:29.04:29,0,126	0/0:7,0:6:5.98:0,6,46	1/1:3,0:3:5.45:19,5,0
chr10	82773002	.	G	GCCA	2774.16	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.155;DP=518;FS=10.000;HRun=0;HaplotypeScore=101.4398;InbreedingCoeff=0.9483;MQ=82.51;MQ0=0;MQRankSum=-11.184;QD=36.50;ReadPosRankSum=-0.117;VQSLOD=3.8905;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,7:10:8.01:214,8,0	0/0:4,0:4:9.03:0,9,159	0/0:17,0:16:45.11:0,45,723	0/0:23,0:23:54.24:0,54,877	0/0:11,0:11:33.09:0,33,506	0/0:25,0:25:69.13:0,69,1014	1/1:6,17:24:41.49:845,41,0	1/1:13,6:19:57.15:932,57,0	0/0:22,0:22:66.21:0,66,1137	0/0:22,0:22:54.13:0,54,733	0/0:8,0:8:18.02:0,18,219	0/0:28,0:28:78.25:0,78,1346	0/0:24,0:24:72.25:0,72,1270	0/0:13,0:13:33.11:0,33,582	0/0:25,0:25:75.26:0,75,1318	0/0:28,0:28:84.29:0,84,1478	0/0:33,0:33:87.30:0,87,1535	0/0:22,0:22:60.13:0,60,991	1/1:4,3:7:21.05:341,21,0	1/1:3,1:4:6.01:77,6,0	0/0:34,0:34:99:0,102,1712	0/0:20,0:20:51.12:0,51,778	0/0:8,0:8:21.02:0,21,259	0/0:22,0:22:66.21:0,66,1136	0/0:13,0:13:39.07:0,39,546	0/0:26,0:26:69.17:0,69,1009	1/1:4,8:11:33.10:544,33,0	0/0:14,0:14:42.14:0,42,741
chr10	82773004	.	T	TG	456.99	PASS	AB=0.625;AC=11;AF=0.196;AN=56;BaseQRankSum=10.996;DP=497;FS=4.545;HRun=0;HaplotypeScore=76.2898;InbreedingCoeff=0.8341;MQ=84.44;MQ0=0;MQRankSum=-9.227;QD=8.31;ReadPosRankSum=-0.015;VQSLOD=3.3935;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,7:8:12.75:58,13,0	0/0:4,0:4:12.02:0,12,149	0/0:17,0:17:48.14:0,48,626	0/0:21,0:21:45.64:0,46,668	0/0:12,0:12:36.06:0,36,417	0/0:24,0:24:66.12:0,66,804	1/1:3,18:21:54.33:272,54,0	0/1:4,6:10:28.41:106,0,28	0/0:21,0:21:63.21:0,63,881	0/0:21,0:21:57.08:0,57,643	0/0:7,0:7:21.03:0,21,241	0/0:26,0:26:78.25:0,78,1073	0/0:24,0:24:72.24:0,72,1006	0/0:15,0:15:42.11:0,42,551	0/0:26,0:26:75.25:0,75,1047	0/0:28,0:28:84.28:0,84,1175	0/0:32,0:32:90.30:0,90,1257	0/0:25,0:25:63.12:0,63,835	1/1:2,3:5:10.80:53,11,0	1/1:2,1:3:5.25:24,5,0	0/0:34,0:34:96.31:0,96,1325	0/0:19,0:19:48.11:0,48,597	0/0:8,0:8:24.02:0,24,266	0/0:23,0:23:63.21:0,63,881	0/0:12,0:12:36.07:0,36,434	0/0:26,0:26:72.11:0,72,870	1/1:0,8:7:20.30:112,20,0	0/0:16,0:16:42.14:0,42,587
chr10	82773006	.	G	GAC	2544.46	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.009;DP=494;FS=8.163;HRun=0;HaplotypeScore=97.9476;InbreedingCoeff=0.9667;MQ=82.45;MQ0=0;MQRankSum=-11.366;QD=27.36;ReadPosRankSum=-3.036;VQSLOD=3.9268;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,7:16:22.13:246,22,0	0/0:4,0:4:12.04:0,12,176	0/0:17,0:16:48.09:0,48,654	0/0:20,0:20:50.66:0,51,729	0/0:10,0:10:24.08:0,24,366	0/0:18,0:18:39.13:0,39,597	1/1:9,18:27:76.28:995,76,0	1/1:13,6:19:42.20:696,42,0	0/0:22,0:22:66.21:0,66,986	0/0:15,0:15:30.10:0,30,452	0/0:4,0:4:12.04:0,12,184	0/0:25,0:25:75.24:0,75,1125	0/0:24,0:24:69.23:0,69,1056	0/0:15,0:15:39.12:0,39,574	0/0:25,0:25:75.24:0,75,1125	0/0:28,0:28:84.29:0,84,1286	0/0:32,0:32:90.31:0,90,1378	0/0:24,0:24:66.12:0,66,929	1/1:7,3:10:24.87:367,25,0	1/1:9,1:10:9.02:108,9,0	0/0:31,0:31:90.27:0,90,1329	0/0:14,0:14:30.10:0,30,456	0/0:4,0:4:12.04:0,12,178	0/0:24,0:24:69.20:0,69,1012	0/0:9,0:9:21.07:0,21,321	0/0:20,0:20:48.14:0,48,693	1/1:3,8:10:24.03:316,24,0	0/0:16,0:16:48.12:0,48,678
chr10	82773802	.	T	TGG	2522.40	PASS	AB=0.781;AC=46;AF=0.821;AN=56;BaseQRankSum=-0.976;DP=309;FS=0.677;HRun=9;HaplotypeScore=51.4120;InbreedingCoeff=0.5522;MQ=84.29;MQ0=0;MQRankSum=-4.240;QD=10.42;ReadPosRankSum=-0.099;VQSLOD=0.0652;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:19:10.36:51,10,0	0/1:1,0:1:0:0,0,0	0/0:19,0:18:43.20:0,43,383	0/0:16,0:15:24.21:0,24,203	1/1:5,1:10:5.43:55,5,0	1/1:2,0:2:3:27,3,0	1/1:15,1:16:6.38:72,6,0	1/1:4,0:6:3:29,3,0	1/1:3,5:9:8.90:94,9,0	1/1:2,1:4:5.51:55,6,0	1/1:2,0:2:3.01:45,3,0	1/1:5,3:8:12.51:180,13,0	1/1:0,7:8:15.01:205,15,0	1/1:4,9:14:4.08:89,4,0	0/1:2,7:9:16.89:149,0,17	1/1:7,15:25:30.06:425,30,0	1/1:9,6:25:32.95:275,33,0	1/1:7,8:15:12.02:143,12,0	1/1:3,2:6:8.98:104,9,0	1/1:1,0:1:0.47:1,0,0	1/1:11,11:23:14.01:156,14,0	1/1:3,5:8:9.03:139,9,0	1/1:3,0:4:2.37:8,2,0	1/1:5,3:10:16.96:183,17,0	1/1:2,3:8:14:134,14,0	0/0:27,0:28:68.87:0,69,699	1/1:5,0:9:8.98:63,9,0	0/0:4,0:4:12.03:0,12,127
chr10	82775660	.	T	TG	1969.62	PASS	AB=0.794;AC=33;AF=0.611;AN=54;BaseQRankSum=-8.088;DP=367;FS=3.128;HRun=10;HaplotypeScore=70.3937;InbreedingCoeff=0.6645;MQ=87.82;MQ0=0;MQRankSum=-1.643;QD=8.99;ReadPosRankSum=2.833;VQSLOD=2.3972;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:34.97:0,35,274	1/1:0,5:5:9.02:95,9,0	0/1:42,0:25:2.97:3,0,142	0/0:30,0:22:3.51:0,4,71	1/1:5,5:10:9.02:95,9,0	1/1:1,3:4:9.02:95,9,0	0/0:17,0:18:50.78:0,51,347	0/0:16,0:16:23.58:0,24,191	0/1:3,10:13:26.18:138,0,26	0/1:7,1:9:18.61:26,0,19	1/1:3,3:6:6.02:64,6,0	1/1:2,12:14:26.66:265,27,0	1/1:2,6:8:11.78:115,12,0	1/1:5,5:10:6.02:64,6,0	1/1:2,7:9:11.95:127,12,0	1/1:6,10:16:18.04:191,18,0	1/1:4,15:19:11.60:296,12,0	1/1:3,12:15:24.06:251,24,0	0/0:14,0:14:32.92:0,33,267	0/0:8,0:8:18.83:0,19,145	1/1:10,0:10:10.83:93,11,0	1/1:9,0:9:8.98:72,9,0	1/1:6,5:11:11.99:115,12,0	./.	1/1:4,5:9:6.02:64,6,0	0/0:17,0:17:35.29:0,35,274	0/0:13,0:13:34.60:0,35,262	0/0:6,0:6:14.97:0,15,123
chr10	82776524	.	CT	C	314.17	PASS	AB=0.901;AC=19;AF=0.380;AN=50;BaseQRankSum=-1.608;DP=133;FS=4.508;HRun=2;HaplotypeScore=41.5973;InbreedingCoeff=0.0515;MQ=76.95;MQ0=4;MQRankSum=-1.252;QD=5.32;ReadPosRankSum=-2.369;VQSLOD=-0.1269;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,1:5:3.01:37,3,0	0/0:2,0:2:6.02:0,6,88	0/0:18,0:5:11.25:0,11,127	0/0:21,0:13:12.98:0,13,123	0/0:3,0:3:0:0,0,0	0/0:5,0:4:2.98:0,3,21	0/1:4,0:4:27.63:28,0,31	0/1:4,2:5:11.08:67,0,11	1/1:1,0:1:2.97:20,3,0	1/1:5,1:6:5.19:39,5,0	./.	0/1:2,0:2:9.89:10,0,34	1/1:2,0:2:2.97:20,3,0	./.	0/0:2,0:2:2.96:0,3,19	0/1:3,1:4:33.28:47,0,33	0/1:5,1:6:30.66:62,0,31	0/0:3,1:3:3.48:0,3,46	0/1:4,0:3:7.84:31,0,8	0/0:5,0:4:6.53:0,7,37	1/1:3,4:7:3.01:36,3,0	0/0:4,1:5:5.37:0,5,24	0/0:3,0:3:5.73:0,6,33	1/1:3,0:3:0.47:1,0,0	0/0:3,0:3:5.75:0,6,49	0/1:6,1:7:54.54:55,0,98	./.	0/0:2,0:2:2.76:0,3,44
chr10	82776530	.	C	CTT	320.49	PASS	AB=0.938;AC=20;AF=0.455;AN=44;BaseQRankSum=0.928;DP=81;FS=0.000;HRun=2;HaplotypeScore=33.6902;InbreedingCoeff=0.1693;MQ=92.41;MQ0=1;MQRankSum=-1.503;QD=6.82;ReadPosRankSum=0.928;VQSLOD=-0.1125;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:3:2.84:0,3,14	0/0:2,0:2:5.36:0,5,22	0/1:13,0:4:9.09:9,0,75	0/0:14,0:10:11.57:0,12,112	1/1:1,0:1:2.94:18,3,0	1/1:0,3:3:3.01:49,3,0	./.	0/0:2,0:2:3.01:0,3,31	./.	0/0:1,0:1:0.47:0,0,1	./.	0/0:1,0:1:2.80:0,3,13	./.	./.	0/0:1,0:1:0.89:0,1,2	0/1:2,0:2:5.21:5,0,7	0/1:2,2:5:2.17:7,0,2	0/0:3,0:2:1.82:0,2,5	0/1:2,0:2:12.56:18,0,13	1/1:3,1:3:5.80:95,6,0	0/0:5,0:5:2.73:0,3,21	1/1:4,0:4:7.49:62,7,0	1/1:2,0:2:5.81:68,6,0	1/1:1,0:1:0.89:2,1,0	1/1:2,0:2:5.81:63,6,0	0/1:5,0:5:12.49:26,0,12	./.	0/1:2,0:2:4.21:24,0,4
chr10	82778442	.	GA	G	9790.27	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=13.561;DP=642;FS=10.738;HRun=7;HaplotypeScore=65.4386;InbreedingCoeff=0.9988;MQ=68.10;MQ0=2;MQRankSum=-1.959;QD=25.23;ReadPosRankSum=7.204;VQSLOD=4.1040;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,1557	1/1:1,9:10:21.05:214,21,0	0/0:23,0:13:30.04:0,30,334	0/0:26,0:21:41.09:0,41,450	1/1:1,23:24:57.09:568,57,0	1/1:2,27:29:81.18:826,81,0	0/0:18,0:18:51.14:0,51,613	0/0:42,0:42:99:0,123,1513	1/1:1,25:26:75.16:758,75,0	1/1:1,20:21:60.10:601,60,0	1/1:1,10:11:24.05:245,24,0	1/1:2,20:22:51.12:520,51,0	1/1:0,21:21:54.12:551,54,0	1/1:2,13:15:39.08:398,39,0	1/1:2,26:28:63.14:643,63,0	1/1:2,25:27:60.14:612,60,0	1/1:1,35:36:90.21:918,90,0	1/1:2,24:26:60.14:612,60,0	0/0:18,0:18:48.14:0,48,593	0/0:26,0:26:66.17:0,66,792	1/1:2,12:14:33.07:337,33,0	1/1:2,13:15:36.08:366,36,0	1/1:1,15:16:39.09:397,39,0	1/1:2,13:15:39.08:398,39,0	1/1:1,31:32:81.18:826,81,0	0/0:24,1:25:44.59:0,45,841	0/0:23,0:23:66.17:0,66,790	0/0:9,0:9:27.09:0,27,340
chr10	82779363	.	GT	G	8242.67	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=8.566;DP=727;FS=6.616;HRun=8;HaplotypeScore=165.8461;InbreedingCoeff=0.8158;MQ=81.78;MQ0=0;MQRankSum=-6.885;QD=12.66;ReadPosRankSum=5.946;VQSLOD=2.7986;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:29:62.05:555,62,0	1/1:22,0:22:53.20:249,53,0	0/0:22,0:22:48.09:0,48,552	0/0:22,0:22:43.57:0,44,439	1/1:18,0:18:45.17:215,45,0	1/1:19,0:19:50.66:238,51,0	1/1:1,18:19:51.01:477,51,0	1/1:5,17:22:51.03:481,51,0	1/1:37,0:37:68.59:396,69,0	1/1:25,0:24:53.07:229,53,0	1/1:25,0:25:22.40:216,22,0	1/1:25,0:25:1.71:186,2,0	1/1:31,0:31:75.49:351,75,0	0/1:18,0:18:77.67:127,0,78	1/1:35,0:35:38.01:331,38,0	1/1:35,0:35:59.34:339,59,0	1/1:48,0:48:99:544,102,0	1/1:35,0:35:86.71:403,87,0	1/1:4,12:16:36.03:338,36,0	1/1:2,17:19:48.06:456,48,0	1/1:22,0:22:28.44:203,28,0	1/1:28,0:28:14.99:210,15,0	1/1:25,0:25:61.83:295,62,0	1/1:42,0:42:60.85:435,61,0	1/1:25,0:25:61.32:286,61,0	0/0:24,0:24:49:0,49,667	1/1:4,27:31:73.33:684,73,0	0/0:7,0:8:23.94:0,24,268
chr10	82779371	.	TC	T	18183.20	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=3.826;DP=694;FS=2.099;HRun=2;HaplotypeScore=127.2948;InbreedingCoeff=0.9986;MQ=80.25;MQ0=0;MQRankSum=-6.044;QD=29.09;ReadPosRankSum=5.769;VQSLOD=4.3389;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:43.98:198,44,0	1/1:0,20:20:57.19:736,57,0	0/0:22,0:22:63.16:0,63,816	0/0:16,0:16:48.07:0,48,594	1/1:0,19:19:48.16:619,48,0	1/1:0,21:21:54.18:697,54,0	1/1:19,0:19:41.98:156,42,0	1/1:17,0:17:35.05:127,35,0	1/1:0,34:34:99:1279,99,0	1/1:0,22:22:66.17:820,66,0	1/1:1,22:23:61.59:802,62,0	1/1:2,21:23:60.07:830,60,0	1/1:0,30:30:80.98:1045,81,0	1/1:7,12:19:31.90:509,32,0	1/1:1,33:34:90.29:1162,90,0	1/1:1,34:35:90.29:1163,90,0	1/1:1,48:49:99:1627,126,0	1/1:0,37:37:93.30:1198,93,0	1/1:12,0:12:26.10:89,26,0	1/1:17,0:17:42.64:179,43,0	1/1:0,20:20:54.18:697,54,0	1/1:0,24:24:66.12:813,66,0	1/1:0,25:25:68.96:864,69,0	1/1:1,41:42:99:1472,114,0	1/1:0,27:27:66.21:852,66,0	0/0:22,1:23:27.36:0,27,807	1/1:27,0:27:62.86:246,63,0	0/0:8,0:8:24.05:0,24,319
chr10	82779374	.	G	GTTTGCTGACTTTT	25693.49	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-14.199;DP=758;FS=0.000;HRun=0;HaplotypeScore=333.7190;InbreedingCoeff=0.9996;MQ=78.43;MQ0=0;MQRankSum=-18.463;QD=152.94;ReadPosRankSum=-4.853;VQSLOD=3.3689;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,18:37:93.19:5401,93,0	0/0:22,0:22:60.20:0,60,1985	0/0:23,0:23:66.20:0,66,2034	0/0:20,0:20:57.11:0,57,1572	0/0:20,0:20:48.16:0,48,1791	0/0:21,0:21:54.19:0,54,1971	1/1:19,7:26:72.25:3570,72,0	1/1:31,3:34:99:4821,99,0	0/0:35,0:35:99:0,102,3538	0/0:24,0:23:66.22:0,66,2293	0/0:23,0:23:69.07:0,69,2385	0/0:24,0:24:72.23:0,72,2370	0/0:33,0:33:84.18:0,84,2882	0/0:18,0:18:54.09:0,54,1699	0/0:33,0:33:80.35:0,80,3222	0/0:35,0:35:90.31:0,90,3186	0/0:50,0:50:99:0,132,4593	0/0:38,0:38:93.27:0,93,3069	1/1:8,6:15:45.15:2501,45,0	1/1:13,8:21:57.18:3270,57,0	0/0:22,0:22:54.18:0,54,1926	0/0:24,0:24:65.89:0,66,2116	0/0:24,0:24:68.93:0,69,2314	0/0:43,0:43:99:0,120,4276	0/0:28,0:28:69.15:0,69,2380	0/0:22,0:22:66.23:0,66,2497	1/1:16,19:35:99:6131,102,0	0/0:8,0:8:24.08:0,24,968
chr10	82780347	.	T	TTGAC	1909.89	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-2.950;DP=700;FS=0.440;HRun=0;HaplotypeScore=165.1273;InbreedingCoeff=0.6161;MQ=72.56;MQ0=2;MQRankSum=-1.201;QD=10.61;ReadPosRankSum=-3.269;VQSLOD=2.7605;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:2.18:43,2,0	0/0:4,0:4:12.04:0,12,216	0/0:24,0:23:60.14:0,60,955	0/0:25,0:24:54.07:0,54,801	0/0:24,0:24:66.21:0,66,1139	0/0:18,0:18:36.12:0,36,646	0/1:29,0:29:0.14:41,0,0	1/1:40,0:40:99:929,103,0	0/0:17,0:17:39.13:0,39,700	0/0:35,0:35:92.65:0,93,1478	0/0:21,0:21:60.18:0,60,974	0/0:30,0:30:66.20:0,66,1106	0/0:27,0:27:57.41:0,57,874	0/0:22,0:22:51.16:0,51,858	0/0:25,0:25:60.15:0,60,960	0/0:32,0:31:79.13:0,79,1346	0/0:28,0:27:72.21:0,72,1252	0/0:22,0:22:59.94:0,60,1027	1/1:8,14:22:47.70:627,48,0	0/1:29,0:29:51.84:295,0,52	0/0:35,0:35:69.19:0,69,1171	0/0:19,0:19:51.15:0,51,849	0/0:18,0:17:39.01:0,39,654	0/0:26,0:26:63.17:0,63,1031	0/0:16,0:16:39.12:0,39,657	0/0:37,0:37:79.40:0,79,876	0/1:23,0:23:60.19:125,0,60	0/0:15,0:15:31.03:0,31,464
chr10	82780357	.	GATTA	G	6120.64	PASS	AB=0.998;AC=28;AF=0.500;AN=56;BaseQRankSum=9.895;DP=682;FS=0.000;HRun=0;HaplotypeScore=145.1474;InbreedingCoeff=-0.4339;MQ=67.96;MQ0=3;MQRankSum=0.002;QD=10.43;ReadPosRankSum=4.932;VQSLOD=4.1225;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:57.12:975,57,0	1/1:5,0:5:11.89:84,12,0	0/0:26,0:24:65.25:0,65,794	0/0:24,0:23:59.03:0,59,805	0/1:22,0:22:99:269,0,128	0/1:16,0:16:36.15:180,0,36	1/1:1,24:25:14.79:253,15,0	1/1:38,0:38:76.78:876,77,0	0/1:20,0:20:64.13:182,0,64	0/1:35,0:35:99:363,0,148	0/1:24,0:24:77.28:257,0,77	0/1:27,0:27:99:200,0,166	0/1:23,0:23:99:191,0,125	0/1:20,0:20:99:133,0,159	0/1:26,0:26:99:147,0,187	0/1:33,0:32:99:330,0,129	0/1:29,0:28:99:135,0,299	0/1:25,0:25:99:206,0,120	0/1:15,0:15:49.05:49,0,250	0/1:29,1:30:99:311,0,272	0/1:26,0:26:85.59:86,0,307	0/1:20,0:20:17.17:285,0,17	0/1:22,0:21:54.15:172,0,54	0/1:25,0:25:99:167,0,146	0/1:19,0:19:87.18:130,0,87	0/0:31,0:31:77.51:0,78,1518	0/1:25,0:25:99:141,0,323	0/0:14,0:14:36.05:0,36,448
chr10	82780361	.	AATTG	A	10612.95	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-6.375;DP=688;FS=2.700;HRun=0;HaplotypeScore=132.7675;InbreedingCoeff=0.7432;MQ=66.71;MQ0=4;MQRankSum=2.306;QD=19.33;ReadPosRankSum=3.410;VQSLOD=4.8664;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:38.90:516,39,0	1/1:0,6:6:15.01:212,15,0	0/0:27,0:25:9.07:0,9,298	0/0:24,0:22:21:0,21,353	1/1:7,16:23:42.14:671,42,0	1/1:3,13:16:30.10:479,30,0	0/1:25,0:25:0.28:146,0,0	0/1:38,0:38:50.91:51,0,110	1/1:4,17:21:30.10:479,30,0	1/1:10,22:33:72.16:1047,72,0	1/1:5,18:23:54.04:749,54,0	1/1:9,21:30:36.05:574,36,0	1/1:8,18:26:32.78:526,33,0	1/1:8,12:20:24.08:383,24,0	1/1:9,15:24:27.09:431,27,0	1/1:8,23:31:60.18:932,60,0	1/1:14,14:28:27.09:431,27,0	1/1:8,18:26:36.12:575,36,0	0/0:16,0:16:33.58:0,34,574	0/1:31,0:31:25.37:25,0,670	1/1:13,14:27:21.07:335,21,0	1/1:2,17:19:48.15:728,48,0	1/1:5,16:20:28.34:462,28,0	1/1:10,14:24:30.10:479,30,0	1/1:6,13:19:24.08:383,24,0	0/0:12,0:33:72.41:0,72,1135	0/0:26,0:26:47.42:0,47,753	0/0:8,0:13:12.04:0,12,210
chr10	82783736	.	T	TCGG	8882.94	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-9.400;DP=699;FS=6.996;HRun=0;HaplotypeScore=99.8426;InbreedingCoeff=0.9974;MQ=80.47;MQ0=0;MQRankSum=-9.401;QD=54.50;ReadPosRankSum=-4.469;VQSLOD=5.6522;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,29:36:75.26:1721,75,0	0/0:10,0:10:30.10:0,30,529	0/0:19,0:20:45.15:0,45,768	0/0:19,0:18:51.17:0,51,841	0/0:28,0:28:69.24:0,69,1212	0/0:25,0:25:75.26:0,75,1320	1/1:4,28:34:87.21:1920,87,0	1/1:14,20:36:93.29:2067,93,0	0/0:23,0:23:66.23:0,66,1151	0/0:21,0:21:54.18:0,54,951	0/0:8,0:8:21.07:0,21,367	0/0:19,0:19:57.17:0,57,945	0/0:23,0:23:69.22:0,69,1187	0/0:30,0:30:90.29:0,90,1553	0/0:30,0:30:87.30:0,87,1535	0/0:25,0:25:75.26:0,75,1323	0/0:41,0:41:99:0,111,1927	0/0:33,0:33:99:0,99,1710	1/1:10,16:26:78.22:1693,78,0	1/1:2,10:11:18.06:362,18,0	0/0:47,0:47:99:0,138,2315	0/0:15,0:15:45.14:0,45,766	0/0:15,0:15:42.14:0,42,741	0/0:31,0:31:87.28:0,87,1506	0/0:26,0:26:78.27:0,78,1367	0/0:34,0:34:96.31:0,96,1643	1/1:1,18:18:47.95:1120,48,0	0/0:13,0:13:33.11:0,33,576
chr10	82784046	.	GTT	G	4692.29	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-7.792;DP=613;FS=12.282;HRun=15;HaplotypeScore=114.5218;InbreedingCoeff=0.8628;MQ=62.90;MQ0=8;MQRankSum=7.050;QD=12.86;ReadPosRankSum=5.568;VQSLOD=2.3997;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:38.95:0,39,335	1/1:2,7:10:23.67:196,24,0	0/0:25,0:15:15.67:0,16,75	0/0:25,0:11:1.77:0,2,67	1/1:4,11:19:34.77:300,35,0	1/1:4,3:7:2.77:71,3,0	0/0:20,0:21:29:0,29,277	0/0:33,0:31:45.70:0,46,308	1/1:7,13:20:15.46:242,15,0	1/1:5,9:14:13.69:244,14,0	1/1:4,2:6:8.02:58,8,0	1/1:17,4:22:35.15:312,35,0	1/1:5,9:13:17.91:144,18,0	1/1:6,18:27:0.53:244,1,0	1/1:6,21:28:40.77:336,41,0	1/1:8,17:24:20.11:257,20,0	1/1:10,24:38:46.98:467,47,0	1/1:21,15:37:48.12:526,48,0	0/0:27,0:24:45.33:0,45,329	0/0:18,0:17:18.22:0,18,157	1/1:6,19:24:28.69:374,29,0	1/1:1,4:7:8.60:107,9,0	1/1:4,11:16:24.16:222,24,0	1/1:2,27:29:38.75:343,39,0	1/1:9,9:19:13.15:249,13,0	0/0:23,0:25:61.10:0,61,593	0/0:36,0:37:63.98:0,64,758	0/0:1,0:3:8.51:0,9,78
chr10	82784060	.	TTG	T	981.42	PASS	AB=0.977;AC=21;AF=0.375;AN=56;BaseQRankSum=-1.781;DP=603;FS=60.179;HRun=0;HaplotypeScore=131.4929;InbreedingCoeff=-0.2626;MQ=56.86;MQ0=14;MQRankSum=6.195;QD=2.44;ReadPosRankSum=6.718;VQSLOD=-0.4680;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:48.92:0,49,455	0/1:10,0:10:10.59:11,0,13	1/1:25,0:9:5:26,5,0	0/1:28,0:10:12:12,0,20	0/1:19,0:18:26.28:26,0,29	0/1:5,0:5:0.98:1,0,6	0/0:24,0:22:45.86:0,46,488	0/0:32,0:29:22.49:0,22,422	0/1:21,1:22:40.47:88,0,40	0/1:15,0:15:23.94:24,0,58	0/0:4,0:4:2.78:0,3,37	0/1:20,2:22:31.80:227,0,32	0/1:12,1:12:9.32:76,0,9	0/1:25,1:26:9.50:64,0,9	0/1:26,0:26:20.89:61,0,21	0/1:25,1:24:62.62:85,0,63	0/1:32,2:34:9.12:172,0,9	0/1:30,2:32:67.72:166,0,68	0/0:32,0:24:36.92:0,37,433	0/0:18,0:16:23.97:0,24,232	0/1:24,0:22:14:14,0,38	0/1:11,0:10:4.73:5,0,60	0/1:16,0:16:19.93:20,0,31	1/1:30,0:30:4.80:57,5,0	0/1:18,0:18:4.82:5,0,81	0/0:23,1:24:26.90:0,27,512	0/0:34,0:33:78.94:0,79,813	0/0:3,0:3:8.81:0,9,84
chr10	82784070	.	G	GTTTT	1077.88	PASS	AB=0.954;AC=7;AF=0.125;AN=56;BaseQRankSum=4.560;DP=577;FS=2.109;HRun=7;HaplotypeScore=152.8175;InbreedingCoeff=-0.1483;MQ=51.71;MQ0=16;MQRankSum=-6.100;QD=5.89;ReadPosRankSum=0.491;VQSLOD=-0.1206;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,2:29:99:419,0,444	0/0:10,0:10:27:0,27,381	0/1:21,0:7:14.20:14,0,22	0/0:22,0:4:8.74:0,9,54	0/0:18,0:17:45.10:0,45,636	0/0:6,0:6:12.02:0,12,163	0/1:23,0:21:81.65:82,0,334	0/1:31,0:28:66.04:66,0,459	0/0:25,0:25:48.04:0,48,669	0/0:15,0:15:41.84:0,42,477	0/0:5,0:5:15.05:0,15,230	0/0:25,0:25:70.38:0,70,803	0/0:12,0:11:21.07:0,21,304	0/0:26,0:26:25.74:0,26,521	0/0:24,0:24:50.83:0,51,764	0/0:25,0:23:51.04:0,51,724	0/0:32,0:32:71.92:0,72,915	0/0:34,0:34:80.03:0,80,1158	0/1:27,0:19:99:252,0,233	0/1:11,6:15:76.63:143,0,77	0/0:21,0:19:45.10:0,45,650	0/0:10,0:9:21:0,21,245	0/0:13,0:13:30.08:0,30,426	0/0:30,0:29:44.91:0,45,610	0/0:16,0:16:36.09:0,36,524	0/0:22,0:22:47.81:0,48,624	0/1:34,0:33:99:231,0,381	0/0:3,0:3:9.03:0,9,130
chr10	82784217	.	G	GT	13471.94	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-4.293;DP=536;FS=4.080;HRun=2;HaplotypeScore=62.9670;InbreedingCoeff=0.9978;MQ=81.29;MQ0=0;MQRankSum=3.103;QD=39.39;ReadPosRankSum=4.081;VQSLOD=5.3513;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,102,1249	1/1:0,9:9:27.09:389,27,0	0/0:15,0:15:39.03:0,39,457	0/0:15,0:15:23.21:0,23,311	1/1:0,13:13:39.06:536,39,0	1/1:0,13:14:39.11:541,39,0	0/0:26,0:26:78.23:0,78,953	0/0:24,0:23:63.02:0,63,746	1/1:0,18:18:48.16:690,48,0	1/1:1,10:12:30.06:400,30,0	1/1:0,6:6:18.06:259,18,0	1/1:1,21:22:60.20:855,60,0	1/1:0,13:13:39.13:561,39,0	1/1:1,18:19:54.18:777,54,0	1/1:0,31:31:87.29:1252,87,0	1/1:1,28:29:75.25:1080,75,0	1/1:4,33:37:90.30:1295,90,0	1/1:0,24:24:69.23:993,69,0	0/0:20,0:20:51.11:0,51,604	0/0:10,0:10:30.09:0,30,372	1/1:1,22:23:63.21:907,63,0	1/1:0,10:10:27.09:389,27,0	1/1:1,17:18:51.17:734,51,0	1/1:1,31:32:90.30:1295,90,0	1/1:0,12:12:36.12:518,36,0	0/0:13,0:13:39.12:0,39,482	0/0:22,0:22:66.19:0,66,804	0/0:10,0:10:30.09:0,30,372
chr10	82784400	.	C	CA	828.48	PASS	AB=0.983;AC=15;AF=0.278;AN=54;BaseQRankSum=5.824;DP=424;FS=0.000;HRun=15;HaplotypeScore=52.0576;InbreedingCoeff=0.4765;MQ=56.03;MQ0=14;MQRankSum=0.447;QD=4.79;ReadPosRankSum=0.350;VQSLOD=1.1134;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:31:47.61:276,48,0	./.	0/1:19,0:7:6.45:6,0,21	0/0:11,1:5:4.72:0,5,18	0/0:4,0:5:2.84:0,3,18	0/0:17,1:18:8.77:0,9,167	1/1:18,0:18:36.88:189,37,0	1/1:24,0:24:45.20:248,45,0	0/0:13,2:16:22.54:0,23,133	0/1:10,0:10:5.26:5,0,72	0/0:8,0:7:11.74:0,12,72	0/0:14,0:14:5.63:0,6,104	0/0:11,1:12:11.26:0,11,70	0/0:15,2:17:4.21:0,4,134	0/0:26,0:28:24.12:0,24,206	0/0:19,3:21:3.94:0,4,135	0/0:23,4:28:13.39:0,13,180	0/0:21,1:21:28.10:0,28,161	1/1:15,0:14:25.98:102,26,0	0/1:5,0:5:7.06:7,0,12	0/0:15,0:13:22.62:0,23,142	0/1:6,0:6:12.73:13,0,27	0/0:7,1:8:11.65:0,12,71	0/1:20,2:22:0.41:0,0,212	0/0:7,0:7:10.80:0,11,59	0/0:9,0:9:14.49:0,14,85	1/1:17,0:17:30.96:152,31,0	0/0:7,0:3:5.87:0,6,36
chr10	82784411	.	A	AC	2745.93	PASS	AB=0.556;AC=11;AF=0.204;AN=54;BaseQRankSum=-10.156;DP=447;FS=1.453;HRun=0;HaplotypeScore=50.1642;InbreedingCoeff=0.8781;MQ=61.36;MQ0=12;MQRankSum=3.171;QD=21.97;ReadPosRankSum=2.485;VQSLOD=5.2080;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,30:32:41.48:763,41,0	./.	0/0:22,0:10:11.24:0,11,215	0/0:14,0:6:7.08:0,7,56	0/0:7,0:7:14.94:0,15,133	0/0:18,0:18:51.92:0,52,593	1/1:0,18:19:39.01:447,39,0	1/1:1,25:28:70.47:699,70,0	0/0:16,0:16:44.92:0,45,458	0/0:12,0:12:35.15:0,35,361	0/0:8,0:8:12.04:0,12,166	0/0:15,0:15:33.48:0,33,384	0/0:12,0:12:32.91:0,33,326	0/0:16,0:16:35.69:0,36,453	0/0:23,0:23:65.45:0,65,690	0/0:23,0:23:61.28:0,61,648	0/0:29,0:28:60.82:0,61,649	0/0:22,0:21:44.98:0,45,494	1/1:1,19:19:53.93:555,54,0	0/1:1,4:5:3.35:59,0,3	0/0:17,0:16:44.96:0,45,495	0/0:5,0:5:13.77:0,14,128	0/0:10,0:10:23.95:0,24,251	0/0:24,0:24:55.85:0,56,688	0/0:10,0:10:23.91:0,24,238	0/0:10,0:10:27.03:0,27,307	1/1:1,15:16:28.89:399,29,0	0/0:8,0:4:11.99:0,12,129
chr10	82784624	.	GC	G	159.11	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=0.991;DP=335;FS=2.658;HRun=6;HaplotypeScore=50.2978;InbreedingCoeff=0.4579;MQ=83.28;MQ0=3;MQRankSum=-0.388;QD=12.24;ReadPosRankSum=0.760;VQSLOD=1.7111;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:45.12:0,45,556	0/0:1,0:1:2.98:0,3,22	0/0:37,0:23:35:0,35,443	0/0:20,0:12:23.34:0,23,212	0/0:5,0:5:6.02:0,6,78	0/0:6,0:6:15.05:0,15,192	0/0:31,0:31:72.05:0,72,835	0/0:11,0:11:18.01:0,18,198	0/0:10,0:10:17.88:0,18,197	0/0:8,0:8:12.04:0,12,158	0/0:2,0:2:6.02:0,6,78	1/1:8,5:13:20.11:250,20,0	0/0:10,0:10:17.84:0,18,158	0/0:8,0:8:17.81:0,18,167	0/0:15,0:15:33.04:0,33,379	0/0:26,0:26:72:0,72,795	0/0:16,0:16:39.05:0,39,436	0/0:18,0:18:47.89:0,48,501	0/0:11,0:11:15.04:0,15,180	0/0:3,0:3:6.02:0,6,78	0/0:16,0:16:14.81:0,15,196	0/0:2,0:2:3.01:0,3,36	0/0:2,0:2:3.01:0,3,39	0/0:15,0:15:36.10:0,36,450	./.	0/0:5,0:5:12.01:0,12,118	0/0:17,0:14:23.82:0,24,226	0/0:4,0:4:9.03:0,9,117
chr10	82784923	.	CT	C	852.95	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=7.830;DP=297;FS=3.102;HRun=14;HaplotypeScore=43.4543;InbreedingCoeff=0.7520;MQ=57.34;MQ0=22;MQRankSum=-4.573;QD=10.40;ReadPosRankSum=-0.227;VQSLOD=2.7365;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,13:17:12.85:224,13,0	./.	0/0:24,0:6:5.74:0,6,37	0/0:20,0:9:0:0,0,0	0/0:12,0:13:17.17:0,17,184	0/0:12,0:12:24.83:0,25,208	1/1:4,3:6:14.07:86,14,0	1/1:8,13:20:41.58:275,42,0	0/0:9,0:8:20.70:0,21,166	0/0:8,0:8:12:0,12,107	0/0:4,0:3:3.47:0,3,29	0/0:4,0:4:5.97:0,6,48	0/0:4,0:4:6.01:0,6,56	0/0:5,0:5:9.01:0,9,81	0/0:8,0:8:12:0,12,107	0/0:8,0:7:14.95:0,15,126	0/0:31,2:32:41.27:0,41,644	0/0:21,0:16:34.69:0,35,273	1/1:8,7:12:23.76:164,24,0	1/1:1,2:3:5.93:41,6,0	0/0:4,0:3:6.01:0,6,56	0/0:2,0:1:0:0,0,0	0/0:4,0:4:9.01:0,9,84	0/0:5,0:5:9.01:0,9,84	0/0:5,0:5:12.01:0,12,111	0/0:13,0:12:22.84:0,23,200	1/1:5,11:16:34.83:232,35,0	0/0:5,0:5:11.85:0,12,98
chr10	82784941	.	GATTT	G	1568.09	PASS	AB=0.731;AC=13;AF=0.250;AN=52;BaseQRankSum=7.757;DP=252;FS=9.527;HRun=0;HaplotypeScore=48.0007;InbreedingCoeff=0.6164;MQ=38.74;MQ0=34;MQRankSum=-6.107;QD=18.23;ReadPosRankSum=0.380;VQSLOD=1.6793;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:12,7:15:54.96:285,0,55	0/0:1,0:1:3.01:0,3,76	1/1:9,0:2:1.25:3,1,0	./.	0/0:9,0:8:15.01:0,15,291	0/0:13,0:11:27.08:0,27,633	1/1:4,2:5:6.02:104,6,0	1/1:10,8:16:24.08:415,24,0	0/0:7,0:6:15.05:0,15,349	0/0:5,0:5:9.03:0,9,227	0/0:4,0:3:9.02:0,9,142	0/0:3,0:3:9.03:0,9,191	0/0:6,0:5:6.02:0,6,152	0/0:4,0:4:12.04:0,12,303	0/0:6,0:6:18.06:0,18,457	0/0:8,0:7:15.02:0,15,325	0/0:33,0:29:72.23:0,72,1619	0/0:20,0:13:36.11:0,36,814	1/1:8,7:11:18.06:295,18,0	1/1:1,2:3:3.01:52,3,0	0/0:3,0:1:3.01:0,3,55	./.	0/0:2,0:2:3.01:0,3,76	0/0:4,0:3:6.02:0,6,135	0/0:7,0:7:21.07:0,21,493	0/0:12,0:11:21.06:0,21,467	1/1:5,11:14:33.11:572,33,0	0/0:7,0:5:12.04:0,12,259
chr10	82785314	.	T	TA	2327.41	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-8.955;DP=512;FS=0.447;HRun=9;HaplotypeScore=60.5036;InbreedingCoeff=0.9200;MQ=79.20;MQ0=0;MQRankSum=0.231;QD=18.18;ReadPosRankSum=-3.037;VQSLOD=2.8557;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:61.18:903,61,0	0/0:6,0:6:18:0,18,156	0/0:22,0:19:16.66:0,17,174	0/1:17,0:15:2.99:3,0,50	0/0:17,0:17:50.97:0,51,439	0/0:16,0:16:35.96:0,36,308	1/1:2,21:23:22.07:472,22,0	1/1:6,14:19:42.10:455,42,0	0/0:16,0:16:44.99:0,45,390	0/0:13,0:13:35.99:0,36,313	0/0:9,0:9:23.99:0,24,208	0/0:23,0:23:68.95:0,69,591	0/0:24,0:24:62.89:0,63,537	0/0:21,0:21:56.93:0,57,482	0/0:30,0:30:74.95:0,75,651	0/0:23,0:23:62.98:0,63,547	0/0:17,0:17:41.13:0,41,374	0/0:16,0:16:44.93:0,45,383	1/1:6,9:16:32.82:319,33,0	1/1:2,6:8:15.04:163,15,0	0/0:33,0:33:80.98:0,81,703	0/0:20,0:21:59:0,59,494	0/0:14,0:14:38.97:0,39,334	0/0:27,0:27:68.92:0,69,590	0/0:9,0:9:17.74:0,18,156	0/0:20,0:20:56.81:0,57,477	1/1:3,9:12:18.05:199,18,0	0/0:7,0:7:21:0,21,182
chr10	82785698	.	TATATATATATATAAA	T	1876.63	PASS	AB=1.000;AC=16;AF=0.471;AN=34;BaseQRankSum=-0.736;DP=152;FS=8.237;HRun=0;HaplotypeScore=63.2728;InbreedingCoeff=0.4323;MQ=73.95;MQ0=13;MQRankSum=-2.955;QD=24.06;ReadPosRankSum=-0.900;VQSLOD=0.6727;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:16:6.02:240,6,0	./.	0/0:12,0:5:4.72:0,5,15	0/0:33,0:8:18.04:0,18,280	./.	0/1:3,0:3:1.19:1,0,44	1/1:0,5:5:6.02:247,6,0	1/1:30,2:31:35.01:914,35,0	./.	./.	./.	./.	0/0:1,0:1:3:0,3,25	0/0:2,0:2:4.26:0,4,62	./.	./.	0/0:12,0:10:4.26:0,4,70	0/0:9,0:8:6.02:0,6,244	1/1:2,4:6:9.01:219,9,0	1/1:3,0:3:3.01:71,3,0	1/1:2,0:2:3.01:51,3,0	./.	./.	./.	0/1:2,0:2:20:20,0,90	0/0:2,0:2:6.02:0,6,175	1/1:2,5:7:6.02:242,6,0	0/0:1,0:1:3.01:0,3,135
chr10	82785710	.	TAAA	T	1476.71	PASS	AB=0.987;AC=31;AF=0.775;AN=40;BaseQRankSum=-0.836;DP=131;FS=0.000;HRun=4;HaplotypeScore=29.8232;InbreedingCoeff=0.2797;MQ=75.28;MQ0=15;MQRankSum=-2.487;QD=12.62;ReadPosRankSum=0.771;VQSLOD=-0.4512;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:13:4.55:30,5,0	./.	0/1:8,0:3:1.23:1,0,3	0/1:24,1:5:6.74:7,0,123	./.	1/1:0,0:2:6.02:104,6,0	1/1:6,0:5:5.60:36,6,0	1/1:5,22:25:55.08:842,55,0	1/1:0,0:1:3.01:52,3,0	./.	./.	./.	./.	1/1:1,0:2:1.09:48,1,0	./.	1/1:0,0:2:3.01:52,3,0	0/1:8,0:6:0:0,0,0	0/0:7,0:7:2.37:0,2,8	1/1:4,0:4:2.84:26,3,0	1/1:2,0:2:3:27,3,0	1/1:0,0:2:3.01:51,3,0	1/1:0,0:1:3.01:52,3,0	./.	1/1:0,0:1:3.01:52,3,0	1/1:0,0:3:9.03:156,9,0	0/0:4,0:4:12.04:0,12,248	1/1:6,0:6:6:53,6,0	0/0:2,0:2:3.01:0,3,62
chr10	82785711	.	A	ATATATAT	835.78	PASS	AB=0.931;AC=23;AF=0.575;AN=40;BaseQRankSum=-2.249;DP=134;FS=6.397;HRun=0;HaplotypeScore=42.4500;InbreedingCoeff=0.3427;MQ=75.37;MQ0=15;MQRankSum=0.813;QD=12.11;ReadPosRankSum=-2.115;VQSLOD=0.4921;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:13:4.57:0,5,52	./.	1/1:7,0:3:2.53:20,3,0	0/0:25,0:5:2.40:0,2,91	./.	1/1:2,0:2:6.01:55,6,0	0/0:5,0:5:5.85:0,6,62	0/1:25,0:24:60.85:387,0,61	1/1:1,0:1:3:27,3,0	./.	./.	./.	./.	1/1:3,0:3:2.74:28,3,0	./.	1/1:2,0:2:3:27,3,0	1/1:1,0:5:1.30:109,1,0	1/1:2,7:10:3.01:122,3,0	0/0:4,0:4:3.01:0,3,49	0/0:2,0:2:3.01:0,3,49	1/1:3,0:2:3.01:30,3,0	1/1:2,0:2:3:27,3,0	./.	1/1:1,0:1:3:28,3,0	1/1:3,0:3:9.01:106,9,0	0/0:4,0:4:12.04:0,12,155	0/0:6,0:6:6.02:0,6,97	0/0:2,0:2:3.01:0,3,39
chr10	82786402	.	T	TCCG	356.35	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=0.636;DP=295;FS=2.930;HRun=0;HaplotypeScore=58.1184;InbreedingCoeff=0.6721;MQ=65.73;MQ0=1;MQRankSum=-0.345;QD=6.48;ReadPosRankSum=0.568;VQSLOD=1.9457;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:11:3.01:61,3,0	0/0:2,0:2:5.99:0,6,49	0/0:8,0:7:15.43:0,15,138	0/0:3,0:3:5.61:0,6,46	0/0:5,0:5:8.73:0,9,73	0/0:16,0:16:38.66:0,39,318	1/1:8,19:28:17.68:218,18,0	1/1:3,0:3:6.49:89,6,0	0/0:9,0:9:23.74:0,24,182	0/0:6,0:6:6:0,6,52	0/0:2,0:2:2.90:0,3,16	0/0:20,0:20:32.84:0,33,302	0/0:11,0:11:26.98:0,27,269	0/0:16,0:16:29.61:0,30,242	0/0:10,0:10:14.74:0,15,141	0/0:11,0:11:30.02:0,30,307	0/0:21,0:21:51:0,51,555	0/0:10,0:10:21.02:0,21,213	1/1:4,0:4:6:54,6,0	1/1:2,0:2:3.01:38,3,0	0/0:37,0:37:75.03:0,75,716	0/0:1,0:1:2.96:0,3,19	0/1:2,0:2:0.01:0,0,0	0/0:33,0:31:78.01:0,78,838	0/0:7,0:7:17.88:0,18,141	0/0:11,0:11:16.01:0,16,135	1/1:5,0:5:3.01:44,3,0	./.
chr10	82786407	.	C	CG	135.86	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=2.331;DP=289;FS=2.924;HRun=0;HaplotypeScore=47.2659;InbreedingCoeff=0.5671;MQ=68.39;MQ0=1;MQRankSum=-0.187;QD=2.66;ReadPosRankSum=2.206;VQSLOD=1.6565;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:2.92:17,3,0	0/0:2,0:2:5.99:0,6,49	0/0:10,0:9:24.04:0,24,164	0/0:4,0:4:8.58:0,9,68	0/0:6,0:6:11.74:0,12,111	0/0:15,0:15:38.62:0,39,295	0/1:28,0:28:5.49:86,0,5	1/1:3,2:5:3.97:60,4,0	0/0:9,0:9:23.89:0,24,189	0/0:2,0:2:6:0,6,52	0/0:1,0:1:2.90:0,3,16	0/0:16,0:16:33.69:0,34,274	0/0:12,0:12:26.84:0,27,219	0/0:15,0:15:31:0,31,234	0/0:11,0:11:22.15:0,22,176	0/0:12,0:12:30.01:0,30,303	0/0:21,0:21:53.96:0,54,519	0/0:12,0:12:23.90:0,24,211	1/1:2,0:2:6:54,6,0	1/1:1,0:1:3.01:38,3,0	0/0:36,0:36:83.41:0,83,726	0/0:2,0:2:3.84:0,4,21	0/0:3,0:3:2.96:0,3,25	0/0:32,0:30:83.32:0,83,786	0/0:7,0:7:17.88:0,18,141	0/0:9,0:9:15.86:0,16,136	1/1:2,3:5:2.90:16,3,0	./.
chr10	82786819	.	G	GCGGAGC	4731.47	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-5.301;DP=391;FS=6.719;HRun=0;HaplotypeScore=100.1307;InbreedingCoeff=0.9568;MQ=77.26;MQ0=0;MQRankSum=-10.529;QD=57.01;ReadPosRankSum=2.287;VQSLOD=5.0239;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:33.11:0,33,707	0/0:5,0:5:12.04:0,12,268	0/0:9,0:9:24.08:0,24,530	0/0:15,0:14:39.13:0,39,844	0/0:13,0:13:30.10:0,30,632	1/1:4,13:17:33.11:1060,33,0	0/0:16,0:16:45.15:0,45,998	0/0:20,0:20:51.16:0,51,1046	1/1:3,13:17:45.15:1447,45,0	0/0:13,0:13:39.13:0,39,851	0/0:8,0:8:18.06:0,18,359	1/1:3,11:14:33.11:1042,33,0	0/0:11,0:11:33.11:0,33,736	0/0:12,0:12:30.10:0,30,627	0/0:18,0:18:48.16:0,48,1062	0/0:15,0:15:36.12:0,36,787	0/0:26,0:26:60.18:0,60,1282	1/1:7,6:14:18.06:568,18,0	0/0:21,0:21:45.14:0,45,905	0/0:9,0:9:21.07:0,21,462	0/0:21,0:21:54.13:0,54,1085	0/0:11,0:11:30.10:0,30,642	1/1:3,4:7:6.02:205,6,0	1/1:3,9:14:12.04:410,12,0	0/0:9,0:9:21.07:0,21,469	0/0:20,0:20:57.19:0,57,1219	0/0:18,0:18:54.19:0,54,1191	0/0:5,0:5:15.05:0,15,335
chr10	82787560	.	GC	G	4811.94	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.830;DP=600;FS=4.173;HRun=5;HaplotypeScore=59.1021;InbreedingCoeff=0.9935;MQ=79.59;MQ0=0;MQRankSum=-0.306;QD=31.45;ReadPosRankSum=-3.209;VQSLOD=4.1386;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:87.25:987,87,0	0/0:4,0:4:12.04:0,12,164	0/0:16,0:16:48.14:0,48,592	0/0:15,0:15:29.68:0,30,366	0/0:15,0:15:36.11:0,36,475	0/0:20,0:20:57.18:0,57,763	1/1:0,22:22:57.16:647,57,0	1/1:1,37:38:99:1231,111,0	0/0:18,0:18:51.17:0,51,697	0/0:20,0:20:54.17:0,54,720	0/0:19,0:19:54.18:0,54,737	0/0:30,0:30:81.26:0,81,1091	0/0:19,0:19:57.19:0,57,779	0/0:22,0:22:66.22:0,66,898	0/0:27,0:27:75.24:0,75,1009	0/0:30,0:30:81.27:0,81,1107	0/0:24,0:24:72.23:0,72,970	0/0:22,0:22:66.22:0,66,902	1/1:1,13:14:39.10:434,39,0	1/1:1,23:24:66.12:732,66,0	0/0:32,0:32:90.30:0,90,1231	0/0:23,0:23:66.20:0,66,872	0/0:11,0:11:30.07:0,30,378	0/0:25,0:25:60.20:0,60,819	0/0:19,0:19:51.17:0,51,693	0/0:21,0:21:60.19:0,60,806	1/1:0,23:23:69.20:783,69,0	0/0:15,0:15:45.10:0,45,565
chr10	82789780	.	TACACACACACACACACAC	T	17841.13	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=6.802;DP=888;FS=13.400;HRun=0;HaplotypeScore=325.9121;InbreedingCoeff=0.8683;MQ=55.72;MQ0=30;MQRankSum=-5.958;QD=30.04;ReadPosRankSum=7.064;VQSLOD=2.0167;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:50:45.13:0,45,1157	1/1:4,11:15:9.03:435,9,0	0/0:32,0:21:3.01:0,3,62	0/0:33,0:26:15.52:0,16,329	1/1:11,13:23:3.01:141,3,0	1/1:12,16:27:20.56:805,21,0	0/0:20,0:35:23.78:0,24,720	0/0:29,0:29:51.13:0,51,1332	1/1:11,27:38:35.64:1749,36,0	1/1:18,28:43:20.90:2202,21,0	1/1:6,11:16:8.78:399,9,0	1/1:14,20:32:24.08:1146,24,0	1/1:8,28:35:36.06:1758,36,0	1/1:8,22:29:24.08:1167,24,0	1/1:16,47:60:54.18:2588,54,0	1/1:23,39:62:58.59:2806,59,0	1/1:8,16:24:9.03:358,9,0	1/1:7,1:8:9.03:329,9,0	0/0:21,0:20:31.34:0,31,757	0/0:12,0:20:24.08:0,24,576	1/1:31,32:63:12.11:275,12,0	1/1:14,14:28:9.50:437,9,0	1/1:5,8:13:6.49:265,6,0	1/1:15,20:34:6.49:222,6,0	1/1:11,14:22:18.06:760,18,0	0/0:23,0:32:57.19:0,57,2274	0/0:19,0:22:33.09:0,33,805	0/0:7,0:18:21.07:0,21,1076
chr10	82791741	.	C	CT	3794.29	PASS	AB=0.817;AC=13;AF=0.232;AN=56;BaseQRankSum=-5.855;DP=543;FS=0.796;HRun=9;HaplotypeScore=58.2947;InbreedingCoeff=0.6783;MQ=64.09;MQ0=2;MQRankSum=-1.003;QD=18.24;ReadPosRankSum=-3.161;VQSLOD=2.8112;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,38:46:90.08:976,90,0	0/0:6,0:6:11.99:0,12,104	0/0:20,0:8:15.32:0,15,129	0/1:21,0:8:18.21:18,0,62	0/0:12,0:12:16.53:0,17,244	0/0:17,0:17:44.98:0,45,390	0/1:5,16:21:21.72:444,0,22	1/1:11,25:36:46.12:720,46,0	0/0:12,0:12:35.99:0,36,312	0/0:24,0:24:67.11:0,67,591	0/0:10,0:10:20.99:0,21,182	0/0:20,0:21:53.02:0,53,449	0/0:17,0:17:47.97:0,48,413	0/0:10,0:10:20.97:0,21,182	0/0:16,0:16:38.97:0,39,338	0/0:19,0:19:11.75:0,12,331	0/0:28,0:29:76.99:0,77,657	0/0:16,1:17:11.06:0,11,323	1/1:0,15:15:45.07:474,45,0	1/1:6,18:24:31.10:571,31,0	0/1:20,3:23:39.40:39,0,379	0/0:17,0:19:46.05:0,46,373	0/0:14,0:14:41.99:0,42,365	0/0:25,0:25:68.94:0,69,592	0/0:15,0:15:35.97:0,36,312	0/0:22,0:22:53.97:0,54,466	1/1:3,18:22:31.06:552,31,0	0/0:10,0:10:17.99:0,18,156
chr10	82796067	.	G	GCGGCACACA	11131.72	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-3.691;DP=722;FS=10.495;HRun=0;HaplotypeScore=188.3222;InbreedingCoeff=0.9922;MQ=82.73;MQ0=1;MQRankSum=-12.652;QD=61.50;ReadPosRankSum=-4.897;VQSLOD=2.6477;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,18:38:54.10:2250,54,0	0/0:6,0:6:12.04:0,12,302	0/0:28,0:28:57.16:0,57,1403	0/0:36,0:36:75.22:0,75,2056	0/0:19,0:19:51.17:0,51,1441	0/0:27,0:27:69.22:0,69,1861	1/1:22,13:36:54.18:2443,54,0	1/1:29,9:41:76.45:2538,76,0	0/0:16,0:16:42.13:0,42,1150	0/0:21,0:21:54.18:0,54,1515	0/0:9,0:9:24.08:0,24,681	0/0:22,0:22:63.22:0,63,1828	0/0:15,0:15:33.11:0,33,962	0/0:29,0:29:66.23:0,66,1860	0/0:34,0:34:90.31:0,90,2554	0/0:32,0:32:87.30:0,87,2514	0/0:50,0:50:99:0,138,3851	0/0:28,0:28:75.26:0,75,2162	1/1:19,4:25:30.10:1218,30,0	1/1:5,11:18:30.06:1283,30,0	0/0:43,0:43:99:0,120,3270	0/0:21,0:21:54.17:0,54,1490	0/0:23,0:23:63.22:0,63,1740	0/0:37,0:37:99:0,105,3030	0/0:14,0:14:39.13:0,39,1138	0/0:24,0:24:60.21:0,60,1712	1/1:14,7:22:33.11:1400,33,0	0/0:7,0:7:21.07:0,21,613
chr10	82800252	.	TAC	T	1559.20	PASS	AB=0.851;AC=12;AF=0.231;AN=52;BaseQRankSum=8.259;DP=1026;FS=6.651;HRun=0;HaplotypeScore=150.7811;InbreedingCoeff=0.8033;MQ=53.41;MQ0=49;MQRankSum=-0.037;QD=6.07;ReadPosRankSum=-0.037;VQSLOD=2.9149;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,22:33:33.11:413,33,0	0/0:11,0:11:21.07:0,21,336	./.	./.	0/0:30,0:27:62.72:0,63,908	0/0:36,0:35:89.89:0,90,1404	1/1:16,17:27:11.83:150,12,0	0/1:45,21:39:54.35:342,0,54	0/0:38,0:36:71.11:0,71,1274	0/0:53,0:46:99:0,114,1734	0/0:17,0:16:42.14:0,42,680	0/0:42,0:41:96.13:0,96,1456	0/0:31,2:31:31.84:0,32,968	0/0:41,0:40:89.98:0,90,1428	0/0:67,0:66:99:0,157,2432	0/0:62,0:62:99:0,150,2375	0/0:27,0:27:62.41:0,62,881	0/0:23,0:23:19.64:0,20,751	1/1:25,10:13:21.07:262,21,0	1/1:5,20:23:18.06:225,18,0	0/0:106,0:96:99:0,186,2804	0/1:31,2:32:2.99:3,0,943	0/0:24,0:24:54.17:0,54,829	0/0:54,1:55:33.30:0,33,1341	0/0:20,0:19:44.89:0,45,689	0/0:50,0:49:94.86:0,95,1628	1/1:8,23:31:26.69:337,27,0	0/0:14,0:14:42.14:0,42,681
chr10	82803285	.	CAAAG	C	35471.23	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.820;DP=808;FS=0.576;HRun=0;HaplotypeScore=153.1314;InbreedingCoeff=0.9997;MQ=80.37;MQ0=0;MQRankSum=-10.987;QD=46.67;ReadPosRankSum=7.077;VQSLOD=5.2438;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,49:51:99:2204,120,0	1/1:0,10:10:30.10:560,30,0	0/0:30,0:30:80.91:0,81,1913	0/0:18,0:18:48.16:0,48,1244	1/1:1,21:22:48.16:869,48,0	1/1:1,25:26:75.26:1400,75,0	1/1:3,25:28:66.23:1227,66,0	1/1:1,19:20:54.19:999,54,0	1/1:0,29:29:66.23:1217,66,0	1/1:0,19:19:57.19:1046,57,0	1/1:2,16:18:42.14:772,42,0	1/1:1,39:40:99:1950,105,0	1/1:1,34:35:96.33:1790,96,0	1/1:3,26:29:66.23:1232,66,0	1/1:2,37:39:99:1894,102,0	1/1:0,36:36:99:1900,102,0	1/1:2,38:40:96.33:1791,96,0	1/1:4,16:20:45.15:840,45,0	1/1:6,26:32:75.24:1358,75,0	1/1:0,37:37:99:1995,108,0	1/1:3,45:48:96.29:1783,96,0	1/1:2,21:23:57.20:1054,57,0	1/1:2,15:17:42.14:776,42,0	1/1:1,36:37:99:1898,102,0	1/1:1,33:34:84.29:1563,84,0	1/1:5,26:31:78.20:1343,78,0	1/1:0,20:20:51.17:952,51,0	1/1:0,19:19:57.20:1060,57,0
chr10	82803723	.	TAA	T	3897.31	PASS	AB=0.905;AC=13;AF=0.232;AN=56;BaseQRankSum=9.799;DP=499;FS=3.435;HRun=11;HaplotypeScore=70.3335;InbreedingCoeff=0.8506;MQ=79.57;MQ0=0;MQRankSum=1.059;QD=22.02;ReadPosRankSum=-0.493;VQSLOD=3.1362;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,28:36:58.55:808,59,0	0/0:3,0:3:9.02:0,9,118	0/0:20,0:17:2.26:0,2,101	0/1:17,2:15:11.84:12,0,115	0/0:15,0:15:36.04:0,36,501	0/0:17,0:18:47.65:0,48,700	1/1:2,16:19:33.03:407,33,0	1/1:1,34:36:95.68:1020,96,0	0/0:14,0:16:44.08:0,44,591	0/0:26,0:28:65.19:0,65,940	0/0:13,0:14:32.55:0,33,442	0/0:16,0:16:48.16:0,48,738	0/0:15,0:16:30.04:0,30,567	0/0:10,0:12:26.05:0,26,321	0/0:22,0:22:63.16:0,63,924	0/0:27,0:27:77.71:0,78,1136	0/0:18,0:19:38.62:0,39,562	0/0:24,0:24:72.18:0,72,1035	1/1:4,15:20:39.04:470,39,0	1/1:2,17:19:45.07:479,45,0	0/0:8,0:8:21.06:0,21,303	0/0:10,0:10:30.06:0,30,435	0/0:4,0:4:12.03:0,12,165	0/0:5,0:6:14.54:0,15,193	0/0:15,0:15:42.05:0,42,573	0/0:17,0:17:30.10:0,30,462	1/1:4,24:28:66.13:702,66,0	0/0:10,0:10:27.08:0,27,395
chr10	82803927	.	C	CTTTCT	9754.88	PASS	AB=0.550;AC=49;AF=0.907;AN=54;BaseQRankSum=0.647;DP=443;FS=3.830;HRun=0;HaplotypeScore=153.2873;InbreedingCoeff=0.6129;MQ=65.45;MQ0=2;MQRankSum=-1.141;QD=23.91;ReadPosRankSum=2.581;VQSLOD=4.4519;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:51.16:1017,51,0	1/1:7,0:6:8.92:113,9,0	0/0:12,0:10:9.03:0,9,119	0/0:16,0:13:5.22:0,5,89	1/1:17,0:15:32.49:278,32,0	1/1:19,0:18:19.37:194,19,0	1/1:11,0:10:8.36:191,8,0	1/1:53,0:53:99:1692,99,0	1/1:9,0:9:14.85:105,15,0	1/1:15,0:14:29.22:357,29,0	1/1:15,0:15:29.59:288,30,0	1/1:12,0:12:32.72:301,33,0	1/1:5,0:5:8.87:61,9,0	1/1:10,0:10:23.50:243,23,0	1/1:18,0:18:38.75:366,39,0	1/1:17,0:17:35.59:254,36,0	1/1:21,0:20:14.88:161,15,0	1/1:9,0:9:14.98:208,15,0	1/1:18,0:18:30.10:602,30,0	1/1:14,0:14:21.07:410,21,0	1/1:11,0:11:5.95:59,6,0	1/1:9,0:9:14.73:93,15,0	./.	1/1:7,0:7:11.85:146,12,0	1/1:18,0:18:47.71:496,48,0	1/1:22,0:22:39.09:744,39,0	1/1:25,0:24:60.14:1129,60,0	0/1:2,9:11:3.12:245,0,3
chr10	82803946	.	C	CT	6666.90	PASS	AB=0.754;AC=32;AF=0.571;AN=56;BaseQRankSum=7.342;DP=445;FS=107.794;HRun=4;HaplotypeScore=105.2855;InbreedingCoeff=-0.3668;MQ=46.62;MQ0=4;MQRankSum=2.290;QD=15.72;ReadPosRankSum=5.294;VQSLOD=0.7166;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,22:32:99:619,0,106	0/1:4,2:5:3.97:62,0,4	0/0:6,0:4:9.03:0,9,106	0/0:10,0:7:8.83:0,9,86	0/1:11,9:18:94.10:261,0,94	0/1:20,2:21:99:104,0,108	0/1:10,4:12:51.44:51,0,166	0/1:10,31:42:21.38:1075,0,21	1/1:5,4:9:15.04:173,15,0	0/1:21,4:24:99:214,0,201	0/1:16,4:20:51.77:235,0,52	0/1:11,5:16:56.77:279,0,57	1/1:3,0:3:9.02:94,9,0	0/1:7,4:11:43.86:164,0,44	1/1:11,8:19:3.35:346,3,0	1/1:7,6:13:36.09:392,36,0	0/1:25,1:25:81:81,0,92	0/1:6,3:8:73.75:87,0,74	0/1:11,9:20:99:278,0,199	0/1:2,8:10:3.79:267,0,4	1/1:6,1:7:6.02:74,6,0	1/1:5,2:7:15.04:162,15,0	0/0:5,0:4:5.62:0,6,47	1/1:4,2:6:6.98:102,7,0	0/1:17,4:21:53.06:403,0,53	0/1:10,9:18:99:398,0,104	0/1:16,16:31:99:662,0,127	0/1:12,1:12:35.17:85,0,35
chr10	82803947	.	TTTC	T	5214.33	PASS	AB=0.902;AC=29;AF=0.518;AN=56;BaseQRankSum=5.840;DP=441;FS=181.580;HRun=0;HaplotypeScore=108.0926;InbreedingCoeff=-0.2968;MQ=45.04;MQ0=4;MQRankSum=2.189;QD=13.23;ReadPosRankSum=2.152;VQSLOD=1.3715;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:32:75.86:76,0,391	0/1:6,0:5:67.60:68,0,78	0/0:5,0:3:9.02:0,9,144	0/0:10,0:7:9:0,9,118	0/1:19,1:18:99:342,0,217	0/1:12,10:21:99:154,0,230	0/0:14,0:12:7.63:0,8,291	0/1:42,0:42:99:489,0,245	1/1:4,5:9:15.04:183,15,0	0/1:23,2:24:99:255,0,437	0/1:12,8:20:99:305,0,152	0/1:13,3:16:99:333,0,140	1/1:0,3:3:9.03:147,9,0	0/1:10,1:11:99:170,0,131	0/1:17,2:19:45.18:424,0,45	1/1:7,6:13:36.12:511,36,0	0/1:11,14:24:99:105,0,223	0/1:9,0:8:99:103,0,146	0/1:20,0:20:99:116,0,397	0/1:10,0:10:49.58:85,0,50	1/1:2,4:6:7.27:95,7,0	1/1:3,3:6:17.85:231,18,0	0/0:4,1:4:5.72:0,6,85	1/1:3,3:6:6.15:134,6,0	0/1:16,5:21:99:496,0,143	0/1:18,1:18:99:191,0,272	0/1:32,0:31:99:203,0,369	0/0:13,0:12:14.56:0,15,133
chr10	82803950	.	C	CT	2169.28	PASS	AB=0.864;AC=27;AF=0.482;AN=56;BaseQRankSum=10.887;DP=431;FS=109.607;HRun=3;HaplotypeScore=108.7657;InbreedingCoeff=0.0237;MQ=41.96;MQ0=5;MQRankSum=-2.768;QD=7.86;ReadPosRankSum=5.856;VQSLOD=-0.3530;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:33:21.32:0,21,330	0/1:4,2:5:15.96:47,0,16	0/0:4,0:3:9.01:0,9,93	0/1:9,0:6:7.40:9,0,7	0/1:11,9:18:81.60:196,0,82	0/1:20,2:21:81.29:81,0,105	0/0:14,0:12:23.73:0,24,223	0/0:36,0:36:62.91:0,63,428	1/1:5,4:9:15.01:140,15,0	0/1:21,3:23:99:150,0,218	0/1:15,4:19:51.87:142,0,52	0/1:11,5:16:57.78:193,0,58	1/1:3,0:3:8.99:75,9,0	0/1:7,4:11:40.56:116,0,41	1/1:11,8:19:10.59:295,11,0	1/1:7,6:13:35.99:311,36,0	0/1:24,1:23:56.54:57,0,101	0/1:9,2:10:76.13:76,0,81	0/0:19,0:19:29.54:0,30,318	0/1:10,0:10:2.54:3,0,43	1/1:5,1:6:6.28:34,6,0	1/1:4,2:6:11.41:119,11,0	0/0:6,0:5:3.62:0,4,33	1/1:4,2:6:6.32:54,6,0	0/1:19,4:23:55.73:226,0,56	0/1:18,0:17:26.76:27,0,154	0/0:29,0:28:13.31:0,13,261	0/0:11,0:10:8.95:0,9,55
chr10	82803957	.	T	TC	1935.78	PASS	AB=0.992;AC=21;AF=0.375;AN=56;BaseQRankSum=-6.105;DP=428;FS=66.735;HRun=0;HaplotypeScore=104.6816;InbreedingCoeff=0.3742;MQ=32.67;MQ0=16;MQRankSum=1.843;QD=7.01;ReadPosRankSum=-0.245;VQSLOD=1.0905;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:33,4:34:41.98:429,42,0	0/1:8,0:7:6.14:6,0,36	0/0:2,0:1:2.90:0,3,16	0/0:3,0:1:3:0,3,25	0/1:22,0:19:6.04:6,0,120	0/1:22,0:21:5.33:5,0,96	1/1:14,0:12:3.33:94,3,0	1/1:35,0:35:54:483,54,0	0/0:8,0:8:13.49:0,13,58	0/0:23,0:22:0.97:0,1,184	0/0:17,0:17:12.57:0,13,100	0/0:16,0:16:21.82:0,22,153	0/0:3,0:3:7.86:0,8,31	0/1:11,0:11:8.35:8,0,79	0/0:19,0:19:30.48:0,30,201	0/0:13,0:13:32.23:0,32,145	0/1:25,0:22:28.63:29,0,50	0/1:13,0:10:16.89:17,0,43	0/1:15,1:16:6.39:178,0,6	1/1:7,2:9:18.18:132,18,0	0/0:7,0:6:5.67:0,6,28	0/0:7,0:7:19.45:0,19,97	0/0:5,0:4:8.89:0,9,59	0/0:9,0:6:7.03:0,7,29	0/0:20,0:19:12.73:0,13,167	1/1:19,1:18:30.95:245,31,0	1/1:31,2:32:29.40:411,29,0	1/1:10,0:8:11.35:74,11,0
chr10	82803960	.	T	TC	416.18	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=12.838;DP=431;FS=39.051;HRun=0;HaplotypeScore=106.5166;InbreedingCoeff=0.0154;MQ=31.57;MQ0=20;MQRankSum=1.092;QD=2.00;ReadPosRankSum=5.024;VQSLOD=0.5349;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,1:37:48.24:0,48,306	0/1:8,0:7:13.55:14,0,26	0/0:2,0:1:0:0,0,0	0/0:3,0:1:0:0,0,0	0/1:24,0:19:59.90:60,0,119	0/1:23,0:21:6.47:6,0,132	0/0:17,0:15:28.28:0,28,174	0/0:30,0:30:48.02:0,48,284	1/1:8,0:8:14.03:67,14,0	0/0:23,0:22:10.76:0,11,226	0/1:16,0:16:47.95:50,0,48	0/1:16,0:16:53.03:53,0,81	1/1:3,0:3:2.31:16,2,0	0/1:11,0:11:26.22:26,0,70	0/1:20,0:20:64.39:64,0,96	1/1:13,0:13:16.97:95,17,0	0/1:23,0:20:10.52:11,0,78	0/0:13,0:10:4.28:0,4,96	0/0:17,1:18:32.40:0,32,227	0/0:8,0:8:12.10:0,12,75	0/1:7,0:6:4.89:5,0,11	0/1:7,0:7:17.64:38,0,18	0/0:5,0:4:8.90:0,9,60	1/1:9,0:6:2.96:21,3,0	0/1:20,0:19:48.82:49,0,108	0/0:19,1:18:2.12:0,2,87	0/0:30,1:30:29.47:0,29,240	0/0:13,0:8:7.46:0,7,34
chr10	82808840	.	TTC	T	401.52	PASS	AB=0.993;AC=26;AF=0.464;AN=56;BaseQRankSum=9.582;DP=500;FS=1.815;HRun=0;HaplotypeScore=89.3198;InbreedingCoeff=-0.6744;MQ=59.83;MQ0=13;MQRankSum=-2.720;QD=1.04;ReadPosRankSum=10.363;VQSLOD=0.1311;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:33,1:34:1.68:80,2,0	0/1:6,0:5:5.67:6,0,17	0/0:55,0:7:16.44:0,16,91	0/0:45,0:12:12:0,12,113	0/1:15,0:15:14.80:30,0,15	0/1:13,0:13:17.73:18,0,28	0/1:12,1:11:26.66:38,0,27	0/1:32,1:33:29.62:30,0,139	0/1:16,0:16:3.75:4,0,75	0/1:19,0:19:42.04:42,0,53	0/1:8,0:8:1.66:2,0,59	0/1:10,0:10:9.56:10,0,16	0/1:13,0:13:18.06:18,0,32	0/1:14,0:14:15.28:15,0,31	0/0:14,0:13:2.87:0,3,99	0/1:13,0:13:12.09:12,0,67	0/1:31,0:29:37.20:37,0,89	0/1:26,0:26:21.87:22,0,61	0/1:16,0:15:35.87:36,0,98	0/1:11,0:11:12.64:13,0,48	0/1:10,0:10:8.88:9,0,56	0/1:11,0:11:19.95:20,0,42	0/1:9,0:8:13.47:16,0,13	0/1:14,0:14:19.01:19,0,31	0/1:7,0:7:11.16:22,0,11	0/1:21,0:21:31.34:31,0,101	0/1:13,1:13:8.93:9,0,50	0/1:9,0:8:12.50:13,0,30
chr10	82808842	.	CTT	C	5797.27	PASS	AB=0.772;AC=51;AF=0.911;AN=56;BaseQRankSum=-3.378;DP=501;FS=1.169;HRun=15;HaplotypeScore=71.4756;InbreedingCoeff=0.3241;MQ=59.47;MQ0=17;MQRankSum=-0.725;QD=13.09;ReadPosRankSum=5.266;VQSLOD=3.9542;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,26:35:50.26:402,50,0	1/1:2,4:5:11.84:101,12,0	0/0:58,0:7:3.41:0,3,21	0/1:45,0:12:5:5,0,93	1/1:3,12:15:32.90:289,33,0	1/1:2,11:13:23.82:211,24,0	1/1:3,9:11:11.66:90,12,0	1/1:10,21:33:58.84:492,59,0	1/1:3,10:13:23.75:211,24,0	1/1:3,16:19:44.23:395,44,0	1/1:3,4:7:11.82:105,12,0	1/1:1,9:10:11.89:106,12,0	1/1:2,9:11:12.89:174,13,0	1/1:2,12:14:26.90:237,27,0	1/1:5,9:13:20.50:184,20,0	1/1:4,9:13:23.69:211,24,0	1/1:6,26:30:65.53:580,66,0	1/1:6,22:28:49.77:428,50,0	1/1:6,8:15:15.70:144,16,0	1/1:3,8:11:20.91:183,21,0	1/1:3,7:10:20.99:184,21,0	1/1:3,8:11:20.87:185,21,0	1/1:2,7:8:14.99:132,15,0	1/1:2,12:14:23.79:210,24,0	1/1:1,5:6:11.89:105,12,0	0/1:9,12:21:6.19:200,0,6	0/1:8,6:13:1.90:100,0,2	1/1:4,5:8:14.97:132,15,0
chr10	82809007	.	G	GGAGGAA	4835.44	PASS	AB=1.000;AC=46;AF=0.920;AN=50;BaseQRankSum=-1.243;DP=351;FS=1.328;HRun=0;HaplotypeScore=79.0022;InbreedingCoeff=0.1401;MQ=54.43;MQ0=27;MQRankSum=-0.990;QD=14.97;ReadPosRankSum=-0.379;VQSLOD=3.8155;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:33:34.33:273,34,0	1/1:1,0:1:3.01:37,3,0	0/1:14,0:10:13.99:14,0,18	0/0:10,0:9:4.56:0,5,32	1/1:7,5:13:11.98:192,12,0	1/1:10,0:9:14.97:404,15,0	1/1:32,0:32:23.64:283,24,0	1/1:21,0:16:23.70:167,24,0	1/1:9,0:9:6.01:116,6,0	1/1:9,0:11:24.48:478,24,0	1/1:13,0:12:13.20:162,13,0	./.	1/1:6,0:6:6.02:124,6,0	1/1:4,0:3:3.01:97,3,0	1/1:9,0:8:3.01:97,3,0	1/1:7,0:5:9.02:139,9,0	1/1:16,0:13:6.02:190,6,0	1/1:17,0:17:30:690,30,0	0/1:22,0:17:20.26:209,0,20	1/1:10,0:8:11.74:74,12,0	1/1:21,0:17:15.01:408,15,0	./.	1/1:3,0:3:6.02:101,6,0	1/1:12,0:12:6.01:74,6,0	./.	1/1:15,0:13:18.81:213,19,0	1/1:15,0:15:13.49:102,13,0	1/1:6,0:4:9.03:193,9,0
chr10	82809028	.	GGAA	G	1375.42	PASS	AB=0.849;AC=29;AF=0.518;AN=56;BaseQRankSum=-0.521;DP=311;FS=47.961;HRun=0;HaplotypeScore=66.5423;InbreedingCoeff=-0.1968;MQ=42.74;MQ0=28;MQRankSum=3.107;QD=6.43;ReadPosRankSum=-0.441;VQSLOD=-0.2504;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:50.67:0,51,587	1/1:1,0:1:2.96:19,3,0	0/1:6,0:4:13.99:14,0,18	0/0:4,0:2:4.56:0,5,32	0/1:10,0:10:21.68:46,0,22	0/1:8,2:9:28.75:87,0,29	0/1:32,0:31:9.88:10,0,380	0/0:28,0:22:19.64:0,20,625	0/1:5,0:5:19.95:20,0,26	0/1:9,3:9:99:168,0,149	0/1:3,4:7:2.45:93,0,2	1/1:4,0:3:3:25,3,0	1/1:0,3:3:6.02:88,6,0	1/1:1,2:2:3.01:45,3,0	1/1:0,5:4:3.01:45,3,0	0/1:4,2:4:22.20:81,0,22	0/1:3,5:6:36.58:81,0,37	0/1:7,7:14:28.41:323,0,28	0/1:25,0:19:6.57:7,0,490	0/0:11,0:10:11.64:0,12,218	0/1:9,11:16:54.98:144,0,55	1/1:5,2:6:3.01:43,3,0	1/1:0,3:3:5.86:65,6,0	0/1:7,0:7:3.18:3,0,40	0/0:3,0:3:3.01:0,3,36	0/1:15,2:15:53.36:53,0,200	0/0:15,0:15:12.79:0,13,322	0/1:8,1:6:75.91:76,0,122
chr10	82809040	.	GGAA	G	376.65	PASS	AB=1.000;AC=23;AF=0.442;AN=52;BaseQRankSum=-1.358;DP=303;FS=0.651;HRun=0;HaplotypeScore=76.8803;InbreedingCoeff=-0.1307;MQ=41.26;MQ0=24;MQRankSum=0.562;QD=2.02;ReadPosRankSum=-4.976;VQSLOD=0.0795;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:26.31:0,26,544	0/0:1,0:1:0.47:0,0,1	./.	./.	0/1:5,0:5:16.63:17,0,25	0/1:12,0:11:5.28:5,0,62	0/1:29,0:28:4.31:4,0,340	0/0:24,4:26:8.30:0,8,431	0/0:5,0:5:2.95:0,3,57	0/1:12,0:10:18.18:18,0,185	0/1:4,0:4:11.38:28,0,11	1/1:2,0:1:3:25,3,0	1/1:4,0:3:2.30:9,2,0	0/0:3,0:2:3.26:0,3,10	0/1:6,0:5:0.19:8,0,0	0/1:8,0:6:13.77:17,0,14	0/1:8,0:7:16.15:28,0,16	0/1:12,0:12:9.37:46,0,9	0/0:21,0:17:16.24:0,16,393	0/1:11,0:11:45.13:45,0,107	0/1:20,0:16:49.32:49,0,57	1/1:6,0:6:6.01:69,6,0	1/1:5,0:4:5.39:34,5,0	1/1:11,0:10:4.96:52,5,0	0/0:3,0:3:0.71:0,1,34	0/1:17,0:15:39.01:39,0,152	0/0:11,0:11:32.72:0,33,360	0/1:14,0:11:29.47:29,0,157
chr10	82809067	.	G	GGAGGAA	3495.14	PASS	AB=0.941;AC=17;AF=0.304;AN=56;BaseQRankSum=-1.242;DP=405;FS=1.820;HRun=0;HaplotypeScore=105.8468;InbreedingCoeff=0.3185;MQ=67.75;MQ0=13;MQRankSum=-3.057;QD=16.64;ReadPosRankSum=1.115;VQSLOD=2.6522;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,23:34:1.89:775,0,2	0/0:3,0:3:0.45:0,0,0	0/0:20,0:10:21.13:0,21,215	0/0:21,0:12:10.74:0,11,194	0/0:6,0:6:11.36:0,11,83	0/0:12,0:11:7.99:0,8,73	1/1:12,23:36:8.18:520,8,0	1/1:27,0:26:60.03:670,60,0	0/0:11,0:11:26.79:0,27,211	0/1:13,0:13:17.80:18,0,77	0/0:5,0:5:8.04:0,8,58	0/1:4,0:4:15.90:16,0,63	0/0:6,0:6:15.45:0,15,126	0/0:3,0:3:5.77:0,6,34	0/0:18,0:17:40.03:0,40,333	0/1:11,0:9:8.05:8,0,53	0/0:15,0:14:17.19:0,17,129	0/1:8,0:8:21:21,0,43	1/1:9,9:18:3.76:630,4,0	1/1:3,10:15:32.63:501,33,0	0/0:26,0:25:12.04:0,12,252	0/0:7,0:7:2.08:0,2,87	0/0:7,0:6:8.78:0,9,76	0/0:16,0:15:32.91:0,33,265	0/1:6,0:6:12.74:13,0,102	0/1:18,0:17:33.94:34,0,165	1/1:4,12:18:9.03:289,9,0	0/0:19,0:18:12.82:0,13,320
chr10	82809572	.	AAAT	A	5033.41	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=11.347;DP=311;FS=4.319;HRun=0;HaplotypeScore=80.5357;InbreedingCoeff=0.8739;MQ=56.45;MQ0=0;MQRankSum=-7.408;QD=26.92;ReadPosRankSum=1.400;VQSLOD=4.8789;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:8.97:0,9,900	1/1:1,3:4:8.94:114,9,0	0/0:13,0:9:17.89:0,18,306	0/0:6,0:5:12.04:0,12,206	1/1:8,6:14:38.69:444,39,0	1/1:12,10:22:47.17:546,47,0	0/0:4,0:4:12.04:0,12,206	0/0:39,0:39:99:0,108,1882	1/1:3,4:7:14.85:153,15,0	1/1:5,4:9:23.77:246,24,0	1/1:6,2:8:24.07:302,24,0	1/1:2,1:3:5.85:63,6,0	1/1:6,3:9:26.82:319,27,0	1/1:5,1:6:17.88:183,18,0	1/1:5,0:5:11.35:58,11,0	1/1:5,1:6:17.68:174,18,0	1/1:5,7:12:20.92:276,21,0	1/1:9,14:23:53.60:657,54,0	0/0:21,0:21:57.19:0,57,1020	0/0:9,0:9:24.07:0,24,365	1/1:2,1:3:6.02:84,6,0	1/1:5,2:7:14.60:147,15,0	1/1:3,0:3:6.02:72,6,0	1/1:3,0:3:3.01:42,3,0	1/1:2,12:14:35.95:510,36,0	1/1:21,0:21:47.30:429,47,0	0/0:12,0:12:33.11:0,33,579	1/1:8,0:8:23.87:214,24,0
chr10	82809575	.	T	TA	3793.34	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=10.858;DP=312;FS=4.488;HRun=3;HaplotypeScore=81.4190;InbreedingCoeff=0.8289;MQ=54.83;MQ0=0;MQRankSum=-9.034;QD=19.96;ReadPosRankSum=0.930;VQSLOD=3.2578;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,1:21:13.52:0,14,590	1/1:3,1:4:5.84:57,6,0	0/0:11,0:7:16.70:0,17,185	0/0:5,0:4:12.04:0,12,149	1/1:9,5:14:31.51:378,32,0	1/1:16,7:23:37.64:402,38,0	0/0:4,0:4:12.04:0,12,149	0/0:42,0:42:99:0,123,1503	1/1:5,2:7:14.83:171,15,0	1/1:7,4:11:24.55:327,25,0	1/1:6,3:9:16.90:217,17,0	1/1:2,1:3:2.94:43,3,0	1/1:5,4:9:21.02:278,21,0	1/1:3,3:6:15:189,15,0	1/1:0,4:4:12.04:172,12,0	1/1:1,5:6:14.98:213,15,0	1/1:13,1:14:6.14:109,6,0	1/1:15,7:22:34.77:420,35,0	0/0:19,0:19:57.18:0,57,700	0/0:9,0:9:24.06:0,24,284	1/1:1,1:2:6.02:85,6,0	1/1:4,2:6:8.93:111,9,0	1/1:2,1:3:6.02:85,6,0	1/1:1,2:3:2.65:42,3,0	1/1:12,2:14:10.27:131,10,0	1/1:22,0:22:34.94:232,35,0	0/0:11,0:11:33.10:0,33,405	1/1:8,0:8:19.77:132,20,0
chr10	82809576	.	AAT	A	1659.62	PASS	AB=0.951;AC=26;AF=0.464;AN=56;BaseQRankSum=5.794;DP=311;FS=5.738;HRun=0;HaplotypeScore=89.0274;InbreedingCoeff=0.1272;MQ=54.63;MQ0=0;MQRankSum=-2.927;QD=9.07;ReadPosRankSum=3.137;VQSLOD=2.9914;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:56.03:0,56,1053	0/1:4,0:4:6.43:16,0,6	0/0:12,0:7:17.27:0,17,284	0/0:5,0:4:12.04:0,12,217	0/1:12,3:15:14.87:133,0,15	0/1:22,1:23:86.93:109,0,87	0/0:4,0:4:12.04:0,12,217	0/0:42,0:42:99:0,126,2195	0/1:6,1:7:16.01:40,0,16	0/1:10,0:10:5.72:6,0,51	1/1:6,3:9:21.17:153,21,0	0/1:3,0:3:6.51:7,0,14	0/1:9,0:9:10.74:74,0,11	0/1:4,2:6:22.99:68,0,23	0/0:4,0:4:11.84:0,12,79	0/1:6,0:6:25.67:26,0,48	1/1:12,1:13:8.67:61,9,0	0/1:22,0:22:83.46:96,0,83	0/0:19,0:19:57.19:0,57,1021	0/0:9,0:9:27.06:0,27,389	1/1:2,0:2:4.07:12,4,0	0/1:5,0:5:19.49:35,0,19	1/1:2,0:2:4.63:15,5,0	1/1:3,0:3:2.04:6,2,0	0/1:14,0:14:3.15:84,0,3	1/1:8,14:22:40.74:596,41,0	0/0:11,0:11:32.93:0,33,531	1/1:4,4:8:24.05:303,24,0
chr10	82809583	.	AAAT	A	1717.87	PASS	AB=0.946;AC=21;AF=0.375;AN=56;BaseQRankSum=7.010;DP=309;FS=27.986;HRun=0;HaplotypeScore=100.5204;InbreedingCoeff=-0.0724;MQ=56.34;MQ0=0;MQRankSum=-7.149;QD=10.35;ReadPosRankSum=-4.814;VQSLOD=0.1757;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.20:0,60,1314	0/0:3,0:3:8.01:0,8,51	0/0:12,0:7:17.65:0,18,341	0/0:6,0:5:14.54:0,15,253	0/1:13,3:16:99:149,0,199	0/1:21,1:22:48.70:49,0,337	0/0:4,0:4:9.03:0,9,207	0/0:44,0:44:99:0,117,2413	0/1:8,0:8:57.75:58,0,60	0/1:12,0:12:12.67:13,0,198	0/1:6,3:9:38.31:194,0,38	0/1:3,0:3:32.06:32,0,56	0/1:7,0:7:55.28:55,0,106	0/1:4,2:6:65.92:66,0,80	0/1:5,0:5:26.18:26,0,102	0/1:6,0:6:22.99:23,0,126	0/1:13,0:13:71.16:71,0,152	0/1:23,0:23:32.84:33,0,477	0/0:21,0:21:54.18:0,54,1142	0/0:8,0:8:21.07:0,21,408	1/1:3,0:3:1.56:38,2,0	0/1:5,0:5:26.15:26,0,73	1/1:2,0:2:5.99:62,6,0	0/0:2,0:2:0.47:0,0,1	0/0:14,0:14:35.95:0,36,320	1/1:5,14:19:52.22:689,52,0	0/0:9,0:9:24.08:0,24,519	1/1:3,4:7:21.07:305,21,0
chr10	82809585	.	A	AG	1628.52	PASS	AB=0.876;AC=21;AF=0.375;AN=56;BaseQRankSum=12.314;DP=301;FS=17.357;HRun=0;HaplotypeScore=91.9167;InbreedingCoeff=-0.0688;MQ=57.89;MQ0=0;MQRankSum=-9.049;QD=9.69;ReadPosRankSum=0.942;VQSLOD=2.7172;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.20:0,60,837	0/1:3,0:3:18.62:19,0,72	0/0:13,0:8:7.40:0,7,203	0/0:7,0:6:8.20:0,8,162	0/1:14,3:17:99:150,0,169	0/1:14,6:20:99:239,0,311	0/0:4,0:4:9.03:0,9,126	0/0:39,0:39:99:0,117,1605	0/1:6,1:8:58.35:91,0,58	0/1:8,4:12:76.18:129,0,76	0/1:6,1:8:62.66:122,0,63	0/1:2,0:3:7.02:7,0,36	0/1:6,1:7:77.19:77,0,99	0/1:6,0:6:24.24:89,0,24	1/1:4,1:5:14.39:95,14,0	0/1:5,2:7:24.51:87,0,25	0/1:12,2:14:93.02:93,0,209	0/1:19,4:24:99:123,0,442	0/0:18,0:18:54.17:0,54,724	0/0:7,0:7:21.07:0,21,292	0/0:1,0:2:0.47:0,0,1	0/1:3,1:6:35.98:36,0,72	1/1:1,0:2:2.96:33,3,0	0/0:1,1:2:0:0,0,0	0/0:13,0:13:10.06:0,10,388	1/1:15,4:19:18.29:271,18,0	0/0:8,0:8:24.08:0,24,335	1/1:7,0:7:11.27:135,11,0
chr10	82809586	.	T	TA	2524.85	PASS	AB=0.735;AC=28;AF=0.500;AN=56;BaseQRankSum=12.963;DP=316;FS=29.985;HRun=3;HaplotypeScore=94.4508;InbreedingCoeff=0.0605;MQ=57.04;MQ0=0;MQRankSum=-8.549;QD=12.62;ReadPosRankSum=-0.165;VQSLOD=0.9514;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.18:0,60,719	0/1:2,0:3:13.68:14,0,33	0/0:12,0:8:13.88:0,14,175	0/0:7,0:6:14.26:0,14,150	0/1:10,3:17:79.01:203,0,79	0/1:10,6:20:99:206,0,159	0/0:4,0:4:12.02:0,12,131	0/0:39,0:39:99:0,99,1178	1/1:5,1:8:2.03:81,2,0	1/1:6,4:14:30.14:259,30,0	0/1:7,1:9:46.63:146,0,47	0/1:4,0:5:23.42:86,0,23	0/1:3,3:8:39.75:75,0,40	0/1:4,0:7:7.72:111,0,8	1/1:2,1:6:14.64:114,15,0	0/1:2,2:7:14.81:105,0,15	0/1:9,4:14:99:108,0,126	0/1:19,4:26:99:169,0,239	0/0:18,0:18:54.17:0,54,647	0/0:7,0:7:18.06:0,18,216	1/1:2,0:2:3.01:41,3,0	0/1:4,1:6:48.40:69,0,48	1/1:2,0:3:9.02:102,9,0	1/1:1,1:2:2.97:20,3,0	0/1:12,0:14:26.11:26,0,252	1/1:17,5:22:65.08:576,65,0	0/0:8,0:8:21.06:0,21,252	1/1:4,3:7:20.98:198,21,0
chr10	82809901	.	AT	A	907.16	PASS	AB=0.944;AC=6;AF=0.107;AN=56;BaseQRankSum=9.968;DP=560;FS=0.565;HRun=10;HaplotypeScore=61.9928;InbreedingCoeff=0.6735;MQ=71.35;MQ0=0;MQRankSum=-1.292;QD=14.40;ReadPosRankSum=2.296;VQSLOD=3.8838;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,117,1283	0/0:6,0:6:18.05:0,18,199	0/0:17,0:15:12.02:0,12,119	0/1:7,0:7:5.82:6,0,97	0/0:22,0:22:54.11:0,54,584	0/0:19,0:19:45.12:0,45,498	0/0:18,0:18:36.07:0,36,381	0/0:31,0:31:84.10:0,84,901	0/0:27,0:27:69.15:0,69,745	0/0:26,0:26:66.14:0,66,717	0/0:11,0:11:30.08:0,30,332	0/0:19,1:20:34.11:0,34,604	0/0:23,1:24:40.07:0,40,648	0/0:15,0:15:39.07:0,39,419	0/0:37,0:37:70.66:0,71,938	0/0:18,0:18:54.13:0,54,588	0/0:27,0:27:69.17:0,69,754	0/0:14,2:16:16.06:0,16,405	0/0:18,0:18:51.14:0,51,564	0/0:7,0:7:21.04:0,21,224	0/0:21,0:21:51.11:0,51,547	0/1:7,1:8:5:5,0,178	0/0:12,0:12:33.09:0,33,365	0/0:25,0:25:69.11:0,69,737	0/0:16,0:16:48.10:0,48,515	1/1:4,25:29:41.76:582,42,0	0/0:21,0:21:57.10:0,57,615	1/1:0,19:19:50.99:443,51,0
chr10	82811804	.	GTCTGTCTGTC	G	7188.02	PASS	AB=0.585;AC=32;AF=0.571;AN=56;BaseQRankSum=6.781;DP=600;FS=1.016;HRun=0;HaplotypeScore=134.4851;InbreedingCoeff=0.7235;MQ=54.67;MQ0=43;MQRankSum=-6.883;QD=22.68;ReadPosRankSum=6.319;VQSLOD=3.2604;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:73.39:0,73,1931	1/1:0,9:9:5.91:172,6,0	0/0:18,0:9:7.35:0,7,322	0/0:25,0:13:10.16:0,10,85	1/1:1,15:15:2.62:73,3,0	1/1:5,14:15:9.03:234,9,0	0/0:26,0:25:46.60:0,47,1209	0/0:51,0:46:7.54:0,8,810	1/1:1,22:23:30.10:985,30,0	1/1:5,14:17:18.41:471,18,0	1/1:0,8:8:6.02:197,6,0	1/1:3,21:22:15.92:581,16,0	1/1:5,17:23:5.33:679,5,0	1/1:5,19:22:36.12:1087,36,0	1/1:3,26:27:33.11:1026,33,0	1/1:1,18:19:8.76:272,9,0	0/1:5,19:23:3.83:185,0,4	1/1:5,15:17:14.85:413,15,0	0/0:23,0:23:42.72:0,43,835	0/0:10,0:9:19.04:0,19,612	0/0:3,26:27:0:0,0,0	1/1:2,11:11:9.03:241,9,0	0/1:4,7:9:0.82:230,0,1	1/1:4,19:19:6.02:170,6,0	1/1:8,0:5:12.04:172,12,0	0/0:27,0:20:41.01:0,41,1044	0/0:25,0:25:58.73:0,59,1554	0/0:13,0:10:9.03:0,9,168
chr10	82811806	.	CTG	C	871.73	PASS	AB=0.977;AC=28;AF=0.500;AN=56;BaseQRankSum=11.945;DP=605;FS=5.294;HRun=0;HaplotypeScore=107.5090;InbreedingCoeff=0.2218;MQ=56.36;MQ0=44;MQRankSum=-9.263;QD=2.35;ReadPosRankSum=8.822;VQSLOD=0.5064;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:37:85.37:0,85,962	1/1:9,0:9:5.34:32,5,0	0/0:19,0:11:30.41:0,30,356	0/1:28,0:14:5.09:5,0,115	1/1:16,0:15:2.94:18,3,0	0/1:20,0:15:22.43:22,0,34	0/0:25,0:24:59.14:0,59,603	0/0:51,0:46:74.43:0,74,711	1/1:23,0:23:29.03:156,29,0	0/1:19,0:17:3.79:4,0,210	1/1:8,0:8:5.81:31,6,0	0/1:24,0:22:22.87:67,0,23	0/1:24,0:22:57.32:84,0,57	1/1:24,0:21:10.18:146,10,0	1/1:30,0:27:31.52:169,32,0	1/1:20,0:19:8.71:47,9,0	0/1:24,0:23:25.07:25,0,34	1/1:20,0:17:14.55:80,15,0	0/0:22,0:22:63.19:0,63,602	0/0:11,0:10:22.50:0,23,263	0/0:30,0:28:3.01:0,3,42	0/1:13,0:11:2.91:24,0,3	0/1:10,0:8:31.10:39,0,31	1/1:23,0:19:5.83:33,6,0	0/1:8,0:5:37.84:38,0,61	0/1:19,8:20:34.85:35,0,743	0/0:25,0:25:22.74:0,23,711	0/0:12,1:10:5.76:0,6,82
chr10	82811810	.	CTG	C	1940.23	PASS	AB=0.974;AC=37;AF=0.661;AN=56;BaseQRankSum=3.715;DP=611;FS=0.948;HRun=0;HaplotypeScore=105.2965;InbreedingCoeff=-0.1440;MQ=57.07;MQ0=46;MQRankSum=-5.721;QD=3.55;ReadPosRankSum=2.253;VQSLOD=2.2902;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,1:39:99:112,0,392	1/1:9,0:9:5.33:32,5,0	0/0:22,0:13:29.25:0,29,372	0/1:31,1:14:8.67:9,0,18	1/1:16,0:15:2.94:18,3,0	0/1:20,0:15:20.56:21,0,27	0/1:25,1:25:98.59:99,0,177	0/1:45,5:45:99:375,0,195	1/1:23,0:22:28.68:146,29,0	1/1:17,0:15:21.63:101,22,0	1/1:8,0:8:5.75:29,6,0	0/1:24,0:22:15.39:71,0,15	0/1:24,0:22:42.42:92,0,42	1/1:24,0:21:34.41:177,34,0	1/1:30,0:27:31.79:170,32,0	1/1:19,0:18:8.59:43,9,0	0/1:23,0:22:23.78:24,0,27	1/1:19,0:16:12.32:59,12,0	0/1:23,1:24:53.88:54,0,180	0/1:10,1:10:44.24:44,0,100	0/0:29,0:27:3.01:0,3,36	1/1:13,0:11:8.76:51,9,0	0/1:10,0:8:23.98:38,0,24	1/1:23,0:19:5.80:31,6,0	1/1:7,0:4:11.35:72,11,0	0/1:27,0:20:36.27:36,0,313	0/1:27,0:27:99:203,0,208	0/0:14,0:11:6.45:0,6,48
chr10	82811812	.	G	GTCTGTCTGTCTCTC	1003.48	PASS	AB=0.938;AC=8;AF=0.143;AN=56;BaseQRankSum=-5.170;DP=616;FS=1.283;HRun=0;HaplotypeScore=193.6885;InbreedingCoeff=0.0157;MQ=57.24;MQ0=47;MQRankSum=-2.220;QD=4.65;ReadPosRankSum=-5.218;VQSLOD=1.3556;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:39:6.12:6,0,801	0/0:9,0:9:6.02:0,6,133	0/0:25,0:15:33.08:0,33,500	0/1:33,0:14:4.84:5,0,68	0/0:16,0:15:2.83:0,3,34	0/0:19,0:15:9.03:0,9,213	0/0:25,0:24:7.50:0,7,519	0/1:48,0:43:82.11:153,0,82	0/0:23,0:22:30.10:0,30,913	0/0:17,0:15:5.73:0,6,179	0/0:8,0:8:6.02:0,6,195	0/0:24,0:22:17.24:0,17,404	0/0:24,0:22:25.24:0,25,542	0/0:24,0:21:35.60:0,36,802	0/0:29,0:27:29.35:0,29,590	0/0:19,0:18:8.94:0,9,280	0/0:22,0:22:12.04:0,12,226	0/0:17,0:16:3.79:0,4,334	0/1:25,0:25:41.01:41,0,310	0/0:11,0:11:2.84:0,3,267	0/0:29,0:27:2.66:0,3,57	0/0:13,0:11:5.19:0,5,122	0/0:9,0:8:12.04:0,12,224	0/0:21,0:19:6.02:0,6,131	0/0:2,0:4:5.68:0,6,28	1/1:28,0:21:27.85:634,28,0	0/1:28,0:27:94.07:94,0,927	0/1:6,4:12:9.38:202,0,9
chr10	82818685	.	TGAGAGAGAGAGA	T	4311.65	PASS	AB=0.767;AC=37;AF=0.685;AN=54;BaseQRankSum=2.565;DP=416;FS=36.058;HRun=0;HaplotypeScore=132.0973;InbreedingCoeff=0.5679;MQ=68.77;MQ0=11;MQRankSum=-5.833;QD=18.91;ReadPosRankSum=4.158;VQSLOD=2.3534;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:24.08:0,24,1121	1/1:1,4:5:6.02:207,6,0	0/0:25,0:13:0:0,0,0	0/0:36,0:18:0:0,0,1	1/1:11,5:16:12.04:332,12,0	1/1:7,2:9:3.01:104,3,0	0/0:20,0:20:33.08:0,33,1245	0/0:40,0:39:37.35:0,37,1244	1/1:12,3:15:9.03:310,9,0	1/1:6,1:7:3.01:104,3,0	1/1:8,0:9:3.01:84,3,0	./.	1/1:8,7:17:24.08:790,24,0	1/1:6,2:10:9.03:291,9,0	1/1:9,4:14:12.04:381,12,0	1/1:8,0:9:6.02:93,6,0	0/1:16,7:22:19.26:299,0,19	1/1:13,4:17:6.02:207,6,0	0/0:15,0:15:15.05:0,15,535	0/0:11,0:10:12.51:0,13,573	1/1:9,0:8:2.99:27,3,0	1/1:3,4:8:12.04:375,12,0	1/1:5,0:6:3.01:84,3,0	1/1:8,8:16:6.02:207,6,0	1/1:1,3:4:3.01:91,3,0	1/1:12,4:17:10.84:237,11,0	0/0:14,0:14:24.08:0,24,1132	1/1:17,0:15:6:90,6,0
chr10	82818823	.	T	TATTATTA	7196.61	PASS	AC=38;AF=0.704;AN=54;BaseQRankSum=-5.486;DP=323;FS=6.122;HRun=0;HaplotypeScore=64.3880;InbreedingCoeff=0.7473;MQ=74.33;MQ0=0;MQRankSum=-6.707;QD=39.33;ReadPosRankSum=1.171;VQSLOD=3.5891;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:39.04:0,39,772	1/1:2,1:3:3.01:112,3,0	0/0:9,0:9:6.02:0,6,117	0/0:12,0:12:5.97:0,6,46	1/1:9,6:19:14.85:257,15,0	1/1:3,11:16:24.08:869,24,0	0/0:6,0:6:12.04:0,12,282	0/0:40,0:40:84.20:0,84,1626	1/1:4,2:9:9.03:259,9,0	1/1:1,6:12:30.09:763,30,0	1/1:6,2:8:6.02:156,6,0	1/1:1,1:3:3.01:112,3,0	1/1:4,2:7:5.80:224,6,0	1/1:9,0:9:8.95:94,9,0	1/1:1,2:3:6.02:224,6,0	1/1:4,6:10:18.06:673,18,0	1/1:5,10:21:21.07:716,21,0	1/1:5,9:14:15.05:493,15,0	0/0:15,0:15:27.09:0,27,605	0/0:15,0:15:24.08:0,24,490	./.	1/1:0,2:2:6.02:224,6,0	1/1:2,1:3:3.01:112,3,0	1/1:2,0:2:2.99:24,3,0	1/1:5,3:8:9.03:337,9,0	1/1:6,6:13:24.01:650,24,0	0/0:20,0:20:39.01:0,39,745	1/1:3,17:20:24.08:896,24,0
chr10	82819813	.	CAGTCACGATTCA	C	1950.94	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.322;DP=586;FS=1.794;HRun=0;HaplotypeScore=220.6474;InbreedingCoeff=0.9947;MQ=87.84;MQ0=0;MQRankSum=-4.975;QD=75.04;ReadPosRankSum=1.183;VQSLOD=3.5108;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.29:0,90,5174	0/0:10,0:10:30.10:0,30,1677	0/0:22,0:22:47.97:0,48,2500	0/0:27,0:27:78.24:0,78,3803	0/0:13,0:13:36.12:0,36,2031	0/0:17,0:17:36.11:0,36,1775	0/0:29,0:29:87.30:0,87,5147	0/0:22,0:22:66.18:0,66,2951	0/0:18,0:18:51.18:0,51,2938	0/0:16,0:16:48.15:0,48,2517	0/0:9,0:9:27.09:0,27,1595	0/0:19,0:19:48.15:0,48,2623	0/0:19,0:19:54.17:0,54,2852	0/0:26,0:26:66.23:0,66,3761	0/0:21,0:21:57.20:0,57,2942	0/0:16,0:16:48.16:0,48,2759	0/0:23,0:23:66.23:0,66,3711	0/0:20,0:20:60.21:0,60,3518	0/0:23,0:23:57.19:0,57,3018	0/0:26,0:26:75.26:0,75,4301	0/0:43,0:43:99:0,108,5982	0/0:22,0:22:57.67:0,58,3131	0/0:12,0:12:36.11:0,36,1873	0/0:38,0:37:99:0,102,5891	0/0:13,0:13:33.11:0,33,1767	1/1:7,11:18:42.13:1394,42,0	0/0:26,0:26:75.26:0,75,4338	1/1:2,6:8:18.06:677,18,0
chr10	82819879	.	T	TCCTCCGGCCCA	36113.74	PASS	AB=0.571;AC=39;AF=0.696;AN=56;BaseQRankSum=-6.370;DP=603;FS=0.368;HRun=0;HaplotypeScore=169.8837;InbreedingCoeff=0.8993;MQ=68.96;MQ0=0;MQRankSum=-15.678;QD=84.77;ReadPosRankSum=4.584;VQSLOD=4.3650;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:90.30:0,90,2953	1/1:5,6:16:26.43:1323,26,0	0/0:11,0:11:20.46:0,20,729	0/0:19,0:19:41.93:0,42,1132	1/1:2,5:14:9.03:510,9,0	1/1:4,9:21:33.11:1756,33,0	0/0:23,0:23:63.19:0,63,1981	0/0:21,0:21:51.15:0,51,1495	1/1:6,10:20:48.16:2498,48,0	1/1:8,5:26:63.12:2531,63,0	1/1:3,4:10:12.04:539,12,0	1/1:3,11:24:39.13:2204,39,0	1/1:3,13:19:45.15:2478,45,0	1/1:7,23:40:87.30:4484,87,0	1/1:1,11:20:30.10:1699,30,0	1/1:3,9:17:30.10:1583,30,0	1/1:3,11:24:36.12:1922,36,0	1/1:6,6:19:30.10:1671,30,0	0/0:27,0:27:75.25:0,75,2181	0/0:16,0:16:48.14:0,48,1370	1/1:7,8:31:23.73:1044,24,0	1/1:5,12:25:41.66:1900,42,0	0/1:4,4:16:83.79:998,0,84	1/1:12,12:31:33.11:1655,33,0	1/1:4,8:18:27.09:1479,27,0	1/1:5,10:25:69.21:2935,69,0	0/0:27,0:26:72.19:0,72,2381	1/1:7,3:10:21.07:905,21,0
chr10	82820240	.	CTCCTTCCTTCCT	C	10944.40	PASS	AB=0.603;AC=34;AF=0.630;AN=54;BaseQRankSum=4.248;DP=704;FS=0.955;HRun=0;HaplotypeScore=221.9563;InbreedingCoeff=0.4846;MQ=55.67;MQ0=10;MQRankSum=-8.760;QD=24.87;ReadPosRankSum=2.810;VQSLOD=3.9763;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,123,4610	1/1:6,10:16:8.90:235,9,0	./.	0/0:34,0:16:0.43:0,0,0	1/1:5,13:18:30.10:762,30,0	1/1:6,24:30:14.26:818,14,0	0/0:26,0:26:39.11:0,39,1138	0/0:32,0:32:24:0,24,500	1/1:3,17:20:18.06:614,18,0	1/1:13,24:36:66.03:1523,66,0	1/1:6,10:16:27:633,27,0	0/1:6,15:21:99:620,0,106	1/1:4,14:18:21.07:727,21,0	1/1:5,20:25:21.07:705,21,0	1/1:10,21:31:39.13:1349,39,0	1/1:2,0:22:20.84:585,21,0	0/1:11,0:30:14.27:78,0,14	0/1:8,11:19:85.73:95,0,86	0/0:18,0:26:30.10:0,30,720	0/0:5,0:23:54.18:0,54,1333	1/1:19,0:19:11.89:214,12,0	1/1:4,19:23:33.11:916,33,0	1/1:5,16:21:20.69:707,21,0	1/1:9,16:24:3.01:104,3,0	0/1:3,0:18:8.14:236,0,8	0/1:8,0:21:19.06:19,0,65	0/0:14,0:34:69.15:0,69,1477	0/1:4,0:10:4.18:4,0,16
chr10	82820790	.	T	TCACACA	23686.53	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=13.715;DP=568;FS=1.751;HRun=0;HaplotypeScore=198.2453;InbreedingCoeff=0.8978;MQ=62.71;MQ0=0;MQRankSum=-15.508;QD=57.49;ReadPosRankSum=4.155;VQSLOD=5.2373;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:82.11:0,82,1728	1/1:4,7:12:23.95:708,24,0	0/0:11,0:11:30.98:0,31,584	0/0:16,0:16:32.16:0,32,690	1/1:13,9:22:27.09:683,27,0	1/1:7,8:15:30.10:853,30,0	0/0:29,0:29:75.23:0,75,1633	0/0:17,0:17:45.14:0,45,896	1/1:11,13:28:72.25:1967,72,0	1/1:8,17:26:68.73:1723,69,0	1/1:5,8:12:27.09:763,27,0	1/1:13,7:23:57.18:1423,57,0	1/1:7,10:18:51.17:1380,51,0	1/1:8,9:19:48.15:1356,48,0	1/1:4,11:16:45.15:1307,45,0	1/1:17,9:27:69.24:1846,69,0	1/1:8,12:26:57.20:1667,57,0	1/1:11,12:24:57.20:1682,57,0	0/1:12,0:12:42.63:43,0,628	0/0:22,0:22:57.20:0,57,1290	1/1:17,23:41:39.10:1029,39,0	1/1:7,5:12:24.08:654,24,0	1/1:7,7:14:27.08:651,27,0	1/1:16,16:33:66.20:1778,66,0	1/1:4,7:11:30.09:812,30,0	1/1:5,10:16:44.85:1118,45,0	0/0:30,0:30:81.26:0,81,1813	1/1:2,2:4:9.03:244,9,0
chr10	82820793	.	C	CACACA	19664.35	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=14.155;DP=546;FS=0.781;HRun=0;HaplotypeScore=193.1630;InbreedingCoeff=0.8919;MQ=63.42;MQ0=0;MQRankSum=-14.530;QD=50.04;ReadPosRankSum=5.557;VQSLOD=5.1666;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.26:0,87,1840	1/1:7,1:8:24.08:621,24,0	0/0:11,0:11:12.13:0,12,621	0/0:16,0:16:47.79:0,48,768	1/1:16,1:18:25.64:573,26,0	1/1:14,0:14:30.10:728,30,0	0/0:30,0:30:84.73:0,85,1757	0/0:16,0:16:48.14:0,48,931	1/1:29,0:29:46.19:1728,46,0	1/1:24,0:24:56.39:1459,56,0	1/1:11,0:10:27.08:670,27,0	1/1:21,2:23:57.18:1279,57,0	1/1:18,0:19:48:1127,48,0	1/1:21,1:22:48.13:1168,48,0	1/1:15,2:17:45.15:1134,45,0	1/1:23,1:24:66.22:1586,66,0	1/1:21,0:23:41.44:1263,41,0	1/1:19,1:22:51.16:1303,51,0	0/1:15,0:15:33.64:34,0,718	0/0:21,0:21:63.20:0,63,1359	1/1:41,0:41:36.11:837,36,0	1/1:14,0:14:21.07:506,21,0	1/1:10,0:10:27.08:586,27,0	1/1:25,0:29:54.16:1262,54,0	1/1:9,0:10:27.08:640,27,0	1/1:16,0:16:33.47:952,33,0	0/0:29,0:29:87.27:0,87,1870	1/1:3,0:4:9.03:210,9,0
chr10	82820798	.	CG	C	5068.71	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=16.130;DP=531;FS=3.485;HRun=1;HaplotypeScore=190.7077;InbreedingCoeff=0.9710;MQ=63.00;MQ0=0;MQRankSum=-15.681;QD=13.74;ReadPosRankSum=2.835;VQSLOD=4.6756;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:89.77:0,90,1050	1/1:7,1:8:23.49:157,23,0	0/0:11,0:11:23.48:0,23,356	0/0:13,0:13:35.71:0,36,348	1/1:17,1:18:23.56:168,24,0	1/1:14,0:14:34.30:240,34,0	0/0:27,0:27:78.08:0,78,941	0/0:13,0:13:32.79:0,33,351	1/1:28,0:28:69.86:434,70,0	1/1:24,0:24:63.75:410,64,0	1/1:10,0:9:26.38:172,26,0	1/1:21,2:23:50.79:315,51,0	1/1:19,0:19:48.63:299,49,0	1/1:20,1:21:51.47:326,51,0	1/1:14,2:16:41.66:283,42,0	1/1:22,1:23:57.97:397,58,0	1/1:22,0:22:49.83:283,50,0	1/1:21,1:22:51.70:360,52,0	0/0:15,0:15:40.95:0,41,458	0/0:21,0:21:59.13:0,59,682	1/1:42,0:42:5.67:153,6,0	1/1:14,0:14:15.29:87,15,0	1/1:8,0:8:20.62:141,21,0	1/1:28,0:28:38.05:281,38,0	1/1:9,0:9:23.34:174,23,0	1/1:15,0:15:41.04:306,41,0	0/0:28,0:28:81.25:0,81,1058	1/1:5,0:5:11.75:83,12,0
chr10	82820801	.	C	CA	4571.09	PASS	AB=0.992;AC=35;AF=0.625;AN=56;BaseQRankSum=12.939;DP=541;FS=2.819;HRun=0;HaplotypeScore=193.6094;InbreedingCoeff=0.6441;MQ=64.36;MQ0=0;MQRankSum=-15.047;QD=11.93;ReadPosRankSum=6.401;VQSLOD=5.2180;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.28:0,93,1250	1/1:8,0:8:3.35:113,3,0	0/0:11,0:11:30.09:0,30,393	0/0:14,0:14:35.58:0,36,424	1/1:19,0:19:19.89:186,20,0	1/1:15,0:15:10.08:232,10,0	0/0:27,0:27:78.21:0,78,1038	0/0:11,0:11:30.08:0,30,374	1/1:29,0:29:18.60:321,19,0	1/1:24,0:24:34.25:399,34,0	1/1:11,0:10:26.33:208,26,0	0/1:23,1:24:8.77:201,0,9	1/1:18,0:18:29.74:239,30,0	0/1:22,0:22:20.07:217,0,20	1/1:19,0:19:18.99:307,19,0	0/1:21,0:21:25.87:242,0,26	1/1:20,2:22:35.98:294,36,0	1/1:21,2:23:33.20:314,33,0	0/0:15,0:15:42.14:0,42,584	0/0:19,0:19:54.10:0,54,680	0/1:44,0:44:3.04:131,0,3	0/1:15,0:15:1.08:92,0,1	1/1:9,0:9:17.96:150,18,0	1/1:27,4:31:21.49:324,21,0	1/1:9,0:9:23.95:203,24,0	1/1:15,0:15:26.93:300,27,0	0/0:28,0:28:81.24:0,81,1083	1/1:4,1:5:11.94:98,12,0
chr10	82820804	.	CCG	C	6362.86	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=13.765;DP=513;FS=11.434;HRun=0;HaplotypeScore=173.7735;InbreedingCoeff=0.9625;MQ=66.06;MQ0=0;MQRankSum=-14.517;QD=18.03;ReadPosRankSum=4.041;VQSLOD=4.0032;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.22:0,93,1702	1/1:6,3:9:17.62:154,18,0	0/0:9,0:10:30.06:0,30,499	0/0:14,0:14:36.07:0,36,504	1/1:2,13:15:26.87:223,27,0	1/1:1,13:14:35.55:338,36,0	0/0:29,0:29:81.20:0,81,1484	0/0:12,0:12:27.04:0,27,448	1/1:11,14:25:58.76:527,59,0	1/1:2,21:23:61.99:659,62,0	1/1:1,10:11:25.31:201,25,0	1/1:6,15:21:38.60:345,39,0	1/1:8,10:18:43.10:410,43,0	1/1:5,13:18:30.02:324,30,0	1/1:9,12:21:50.66:442,51,0	1/1:2,14:16:36.51:360,37,0	1/1:9,12:21:44.86:415,45,0	1/1:5,18:23:46.50:470,46,0	0/0:15,0:15:41.87:0,42,775	0/0:18,0:18:54.13:0,54,910	1/1:5,37:42:5.75:159,6,0	1/1:1,9:10:8.97:73,9,0	1/1:1,7:8:17.98:154,18,0	1/1:13,15:28:38.94:366,39,0	1/1:1,8:9:20.76:193,21,0	1/1:0,16:16:42.05:438,42,0	0/0:30,0:30:90.13:0,90,1571	1/1:1,4:5:11.86:112,12,0
chr10	82821410	.	GT	G	4590.19	PASS	AB=0.554;AC=38;AF=0.679;AN=56;BaseQRankSum=10.892;DP=488;FS=4.891;HRun=1;HaplotypeScore=122.8914;InbreedingCoeff=0.8174;MQ=66.41;MQ0=4;MQRankSum=-4.468;QD=15.46;ReadPosRankSum=6.203;VQSLOD=5.0285;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:40:67.83:0,68,247	1/1:1,1:4:8.52:51,9,0	0/0:27,0:24:69.23:0,69,1048	0/0:22,0:21:51.38:0,51,652	0/1:4,13:18:2.67:177,0,3	1/1:2,12:17:14.54:248,15,0	0/0:26,0:24:36.45:0,36,148	0/0:26,0:24:65.32:0,65,292	1/1:0,8:9:26.28:174,26,0	1/1:3,6:11:2.44:136,2,0	1/1:7,6:13:17.33:186,17,0	1/1:5,15:20:41.22:365,41,0	1/1:6,16:22:39.08:315,39,0	1/1:3,9:12:9.41:192,9,0	1/1:3,17:19:56.21:401,56,0	1/1:3,8:11:22.30:214,22,0	1/1:7,11:18:30.55:292,31,0	0/1:3,15:18:7.19:250,0,7	0/0:11,0:11:30.62:0,31,144	0/0:18,0:17:36.90:0,37,146	1/1:8,14:22:20.38:304,20,0	1/1:1,8:10:23.76:175,24,0	1/1:3,6:12:25.11:161,25,0	1/1:7,16:23:29.42:407,29,0	1/1:1,14:15:44.63:327,45,0	1/1:0,0:15:37.07:168,37,0	0/0:18,0:17:14.57:0,15,86	1/1:0,0:6:12.88:49,13,0
chr10	82821412	.	GT	G	9998.13	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.423;DP=488;FS=0.000;HRun=1;HaplotypeScore=103.4722;InbreedingCoeff=0.9352;MQ=66.32;MQ0=4;MQRankSum=-4.367;QD=22.72;ReadPosRankSum=7.923;VQSLOD=4.4593;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,42:41:99:1435,105,0	1/1:3,1:4:7.26:55,7,0	0/0:26,0:23:66.18:0,66,867	0/0:22,0:21:39.55:0,40,525	1/1:5,13:18:19.80:200,20,0	1/1:5,12:17:28.63:268,29,0	1/1:1,26:25:72.24:996,72,0	1/1:1,25:24:72.18:910,72,0	1/1:1,8:9:26.60:182,27,0	1/1:5,6:11:19.34:160,19,0	1/1:6,6:12:24.49:195,24,0	1/1:5,15:20:48.38:375,48,0	1/1:4,17:20:48.99:366,49,0	1/1:4,9:13:20.44:226,20,0	1/1:3,17:19:56.21:403,56,0	1/1:2,9:11:32.81:267,33,0	1/1:7,11:18:38.29:302,38,0	1/1:4,15:19:17.74:286,18,0	1/1:0,11:11:33.07:423,33,0	1/1:1,17:17:48.06:610,48,0	1/1:7,14:21:36.88:337,37,0	1/1:2,8:10:23.76:171,24,0	1/1:6,6:12:25.40:166,25,0	1/1:8,16:24:48.10:446,48,0	1/1:2,13:15:44.64:328,45,0	1/1:16,0:15:38.15:240,38,0	1/1:0,17:17:42.13:565,42,0	1/1:6,0:6:14.65:86,15,0
chr10	82821622	.	C	CAAAAAAAAA	3164.73	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=3.663;DP=346;FS=2.676;HRun=0;HaplotypeScore=75.8665;InbreedingCoeff=0.7039;MQ=58.59;MQ0=12;MQRankSum=-4.047;QD=21.68;ReadPosRankSum=-4.682;VQSLOD=1.1163;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:99:0,102,2590	1/1:0,0:2:3.01:101,3,0	0/0:38,0:10:11.30:0,11,168	0/0:30,0:9:11.62:0,12,97	1/1:9,1:10:21.04:396,21,0	1/1:1,5:9:6.02:164,6,0	0/0:19,0:19:53.93:0,54,1256	0/0:22,0:22:56.89:0,57,1320	1/1:0,0:9:3.01:98,3,0	1/1:3,1:16:35.61:495,36,0	1/1:0,2:10:15.01:371,15,0	1/1:6,0:6:14.94:118,15,0	1/1:0,0:5:3.01:98,3,0	1/1:3,0:5:8.06:200,8,0	1/1:3,5:16:9.10:344,9,0	1/1:0,3:4:2.53:129,3,0	1/1:6,0:6:8.03:68,8,0	1/1:0,0:7:3.01:124,3,0	0/0:20,0:19:54.10:0,54,1424	0/0:20,0:20:60.16:0,60,1645	1/1:11,0:10:20.95:180,21,0	1/1:1,0:3:8.91:61,9,0	1/1:1,2:6:6.45:113,6,0	1/1:7,0:7:17.89:139,18,0	1/1:0,3:5:3.01:130,3,0	1/1:0,0:2:2.99:23,3,0	0/0:12,0:12:30.02:0,30,730	1/1:5,0:3:0.91:3,1,0
chr10	82824445	.	T	TA	22162.65	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.365;DP=672;FS=1.852;HRun=5;HaplotypeScore=58.3534;InbreedingCoeff=0.9741;MQ=74.99;MQ0=0;MQRankSum=-7.607;QD=34.25;ReadPosRankSum=4.528;VQSLOD=5.0475;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,41:45:99:1499,114,0	1/1:0,11:11:27.09:355,27,0	0/0:19,0:19:48.10:0,48,501	0/0:6,0:6:12.03:0,12,129	1/1:2,34:36:99:1261,99,0	1/1:1,20:21:57.19:750,57,0	1/1:2,21:23:54.18:711,54,0	1/1:3,28:30:84.27:1103,84,0	1/1:3,18:21:51.17:671,51,0	1/1:5,33:38:99:1303,99,0	1/1:1,27:28:75.07:925,75,0	1/1:3,12:15:33.11:434,33,0	1/1:0,7:7:15.05:197,15,0	1/1:2,23:25:69.22:907,69,0	1/1:4,22:25:60.20:790,60,0	1/1:0,31:31:93.30:1224,93,0	1/1:3,28:31:81.26:1066,81,0	1/1:2,17:19:48.16:632,48,0	1/1:1,9:10:27.05:336,27,0	1/1:4,31:35:87.21:1121,87,0	1/1:1,31:32:90.29:1184,90,0	1/1:3,20:23:54.18:711,54,0	1/1:0,21:21:57.19:749,57,0	1/1:1,20:21:54.18:711,54,0	1/1:1,23:24:66.21:869,66,0	1/1:1,27:28:78.24:1012,78,0	1/1:2,33:36:99:1287,99,0	1/1:0,9:9:27.09:355,27,0
chr10	82824811	.	GCATA	G	2041.20	PASS	AB=0.785;AC=13;AF=0.250;AN=52;BaseQRankSum=9.141;DP=751;FS=3.279;HRun=0;HaplotypeScore=127.2023;InbreedingCoeff=0.5979;MQ=60.14;MQ0=6;MQRankSum=0.521;QD=9.15;ReadPosRankSum=0.096;VQSLOD=3.0753;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,12:35:21.07:327,21,0	0/0:11,0:12:30.09:0,30,616	./.	./.	0/0:32,0:32:48.10:0,48,988	0/0:11,0:22:21.07:0,21,384	0/1:18,10:27:28.16:216,0,28	1/1:30,0:27:2.97:20,3,0	0/0:32,1:33:16.50:0,16,1193	0/0:27,0:27:45.14:0,45,877	0/0:33,0:33:57.20:0,57,1342	0/0:18,0:18:39.12:0,39,818	0/1:22,1:24:1.55:2,0,878	0/0:24,1:25:4.41:0,4,898	0/0:44,2:46:27.05:0,27,2198	0/0:27,0:27:11.99:0,12,1084	0/0:24,0:24:38.34:0,38,824	0/0:11,0:11:6.02:0,6,141	1/1:16,2:19:15.04:191,15,0	1/1:9,27:36:51.17:793,51,0	0/0:43,1:44:13.33:0,13,1172	0/0:8,0:16:21.07:0,21,367	0/0:27,0:27:54.19:0,54,1216	0/0:43,0:43:81.18:0,81,1664	0/0:21,0:21:4.99:0,5,950	0/0:21,0:21:48.16:0,48,1092	1/1:9,18:27:9.45:400,9,0	0/1:11,12:23:99:256,0,113
chr10	82825124	.	TTG	T	11550.61	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=8.168;DP=749;FS=17.773;HRun=0;HaplotypeScore=109.8709;InbreedingCoeff=0.9840;MQ=59.83;MQ0=5;MQRankSum=0.983;QD=17.63;ReadPosRankSum=2.294;VQSLOD=4.0326;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:56:88.10:429,88,0	1/1:1,6:8:12.04:142,12,0	0/0:20,0:12:27.09:0,27,417	0/0:16,0:12:21.05:0,21,298	1/1:5,24:30:56.96:638,57,0	1/1:8,16:24:41.99:477,42,0	1/1:11,0:28:22.73:112,23,0	1/1:10,0:34:59.49:291,59,0	1/1:4,13:17:35.94:405,36,0	1/1:9,22:31:63.15:718,63,0	1/1:9,9:18:24.07:284,24,0	1/1:5,25:30:54.16:640,54,0	1/1:7,21:28:45.14:533,45,0	1/1:3,23:26:57.17:675,57,0	1/1:4,28:32:63.19:746,63,0	1/1:8,22:30:57.17:676,57,0	1/1:4,31:36:69.21:817,69,0	1/1:5,18:23:14.96:370,15,0	1/1:6,0:20:36.11:170,36,0	1/1:2,0:17:39.84:198,40,0	1/1:6,29:35:57.17:675,57,0	1/1:3,16:19:41.96:476,42,0	1/1:4,24:28:47.79:568,48,0	1/1:8,32:40:78.24:924,78,0	1/1:5,13:18:30.09:355,30,0	0/0:38,0:38:81.25:0,81,1218	1/1:8,0:24:42.29:229,42,0	0/0:20,0:18:51.17:0,51,808
chr10	82825771	.	GTTT	G	2324.07	PASS	AB=0.898;AC=32;AF=0.571;AN=56;BaseQRankSum=-1.115;DP=500;FS=8.223;HRun=16;HaplotypeScore=79.3727;InbreedingCoeff=0.6176;MQ=63.29;MQ0=10;MQRankSum=1.711;QD=9.15;ReadPosRankSum=4.075;VQSLOD=-0.2828;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:41.20:0,41,392	1/1:3,1:4:2.98:25,3,0	0/0:40,0:11:2.28:0,2,26	0/0:26,0:9:8.55:0,9,46	0/1:14,0:14:28.87:79,0,29	1/1:13,3:16:11.21:97,11,0	0/0:20,0:20:30.71:0,31,295	0/0:32,0:30:45.77:0,46,472	1/1:3,9:12:8.03:57,8,0	0/1:17,2:20:4.51:219,0,5	1/1:9,0:9:13.09:96,13,0	1/1:12,0:12:20.05:178,20,0	1/1:15,0:15:7.07:160,7,0	0/1:7,2:9:19.45:19,0,37	1/1:8,3:11:19.22:175,19,0	1/1:6,8:14:11.24:107,11,0	1/1:22,7:28:34.15:377,34,0	0/1:13,1:13:2.53:129,0,3	0/0:13,0:13:29.56:0,30,263	0/0:19,0:19:35.68:0,36,307	1/1:21,3:24:5.93:234,6,0	1/1:9,3:11:17.63:173,18,0	1/1:5,4:7:5.95:62,6,0	1/1:13,1:13:8.54:72,9,0	1/1:14,0:15:32.08:266,32,0	0/0:27,0:27:63.02:0,63,677	0/0:28,0:28:50.92:0,51,422	0/0:11,0:11:22.21:0,22,221
chr10	82825788	.	CT	C	1104.27	PASS	AB=0.881;AC=36;AF=0.643;AN=56;BaseQRankSum=2.265;DP=509;FS=8.300;HRun=16;HaplotypeScore=70.2601;InbreedingCoeff=0.2843;MQ=46.94;MQ0=27;MQRankSum=-3.212;QD=2.67;ReadPosRankSum=1.303;VQSLOD=-0.7597;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:27:17.89:18,0,41	0/0:2,0:2:0:0,0,0	0/0:25,1:2:2.74:0,3,12	0/1:23,0:6:1.61:2,0,7	1/1:13,1:14:8.73:57,9,0	1/1:15,3:19:6.83:33,7,0	1/1:12,0:18:8.43:24,8,0	1/1:24,0:28:12.91:38,13,0	1/1:16,0:15:11.73:78,12,0	1/1:13,8:20:20.07:146,20,0	0/0:11,0:11:3:0,3,29	0/1:12,0:12:17.73:18,0,21	1/1:8,4:12:16.09:106,16,0	0/0:7,5:12:2.74:0,3,12	1/1:5,9:13:13.64:87,14,0	1/1:12,2:12:11.39:85,11,0	0/1:18,12:28:69.85:100,0,70	1/1:9,9:16:8.75:60,9,0	1/1:16,0:22:20.91:79,21,0	0/0:14,0:13:0.83:0,1,9	0/1:22,3:25:6.97:124,0,7	1/1:7,5:10:8.91:65,9,0	1/1:9,0:7:5.91:39,6,0	0/0:9,8:15:3:0,3,28	1/1:9,3:11:5.22:41,5,0	0/1:25,2:27:37.66:38,0,143	1/1:13,0:27:9.87:27,10,0	0/0:12,0:12:17.92:0,18,157
chr10	82827260	.	A	AT	27105.58	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.144;DP=694;FS=0.636;HRun=1;HaplotypeScore=108.4437;InbreedingCoeff=0.9986;MQ=77.81;MQ0=0;MQRankSum=-9.866;QD=41.32;ReadPosRankSum=4.479;VQSLOD=4.5893;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,37:38:99:1573,105,0	1/1:1,11:12:30.10:436,30,0	0/0:20,0:20:56.86:0,57,654	0/0:18,0:18:44.07:0,44,476	1/1:1,26:27:78.18:1119,78,0	1/1:1,18:19:54.18:810,54,0	1/1:2,19:21:54.18:809,54,0	1/1:0,30:30:90.26:1287,90,0	1/1:1,18:19:48.16:719,48,0	1/1:0,35:35:99:1574,105,0	1/1:2,21:23:60.16:873,60,0	1/1:1,23:24:69.23:1034,69,0	1/1:1,31:32:90.30:1348,90,0	1/1:2,29:31:84.28:1259,84,0	1/1:0,37:37:99:1619,108,0	1/1:0,21:21:60.19:899,60,0	1/1:0,23:23:63.21:944,63,0	1/1:1,33:34:96.33:1438,96,0	1/1:1,21:22:66.13:939,66,0	1/1:2,23:25:69.20:1010,69,0	1/1:1,35:36:99:1529,102,0	1/1:0,24:24:66.22:989,66,0	1/1:3,13:16:36.12:540,36,0	1/1:0,24:24:69.15:1006,69,0	1/1:1,22:23:54.93:933,55,0	1/1:2,27:29:78.26:1167,78,0	1/1:1,22:23:63.21:944,63,0	1/1:2,6:8:23.97:307,24,0
chr10	82827675	.	G	GT	16964.27	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-16.300;DP=770;FS=15.207;HRun=5;HaplotypeScore=69.6726;InbreedingCoeff=0.9994;MQ=92.96;MQ0=0;MQRankSum=-5.201;QD=34.06;ReadPosRankSum=6.073;VQSLOD=3.3226;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,1450	1/1:1,11:12:27.09:355,27,0	0/0:36,0:36:93.19:0,93,971	0/0:28,0:28:34.18:0,34,626	1/1:1,25:26:72.23:947,72,0	1/1:2,19:21:57.19:750,57,0	0/0:27,0:27:78.20:0,78,837	0/0:48,0:48:99:0,123,1313	1/1:0,32:32:96.31:1263,96,0	1/1:6,28:34:81.25:1052,81,0	1/1:1,26:27:75.16:948,75,0	1/1:0,17:17:42.14:552,42,0	1/1:3,24:27:63.20:829,63,0	1/1:1,26:27:69.22:908,69,0	1/1:5,42:47:99:1540,117,0	1/1:2,30:32:84.24:1087,84,0	1/1:0,24:24:69.22:908,69,0	1/1:3,23:26:54.18:711,54,0	0/0:29,0:29:81.16:0,81,852	0/0:22,0:22:57.13:0,57,604	1/1:4,27:31:80.70:1065,81,0	1/1:0,21:21:63.20:829,63,0	1/1:1,11:13:33.11:434,33,0	1/1:1,32:33:90.29:1184,90,0	1/1:2,19:21:57.19:750,57,0	1/1:5,14:19:42.12:537,42,0	0/0:35,0:34:90.16:0,90,941	1/1:0,8:8:24.08:316,24,0
chr10	82828279	.	G	GAC	1873.56	PASS	AB=0.709;AC=14;AF=0.250;AN=56;BaseQRankSum=1.710;DP=640;FS=0.000;HRun=0;HaplotypeScore=154.3879;InbreedingCoeff=-0.2627;MQ=45.39;MQ0=21;MQRankSum=-2.861;QD=6.51;ReadPosRankSum=4.954;VQSLOD=2.6709;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:22.57:0,23,222	0/1:8,3:8:48.69:85,0,49	0/0:9,0:2:2.99:0,3,24	0/0:23,0:3:2.98:0,3,21	0/0:11,17:27:5.97:0,6,46	0/1:22,9:31:31.04:31,0,157	0/0:23,0:23:9.88:0,10,77	0/0:54,0:50:99:0,132,1234	0/1:8,8:14:39.46:39,0,66	0/1:22,14:30:99:690,0,128	0/0:11,13:23:12.30:0,12,84	0/1:10,10:20:44.16:96,0,44	0/1:6,11:17:54.15:54,0,88	0/0:7,7:13:5.92:0,6,40	0/0:11,9:19:2.97:0,3,20	0/1:12,13:22:99:147,0,102	0/1:8,10:20:24.51:207,0,25	0/1:12,11:21:97.12:97,0,136	0/0:25,0:24:61.67:0,62,475	0/0:23,0:21:24.19:0,24,209	0/0:11,12:21:5.51:0,6,40	0/0:8,8:16:6.47:0,6,57	0/0:9,7:15:3:0,3,25	0/1:11,13:25:83.43:83,0,164	0/1:12,5:13:40.90:45,0,41	0/1:36,3:36:79.96:389,0,80	0/0:15,0:15:26.05:0,26,198	1/1:3,1:5:5.89:59,6,0
chr10	82828283	.	G	GAC	815.29	PASS	AB=0.961;AC=11;AF=0.196;AN=56;BaseQRankSum=6.979;DP=654;FS=0.000;HRun=0;HaplotypeScore=156.0770;InbreedingCoeff=-0.1013;MQ=43.11;MQ0=22;MQRankSum=-2.022;QD=3.64;ReadPosRankSum=5.963;VQSLOD=2.4251;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:37.54:0,38,242	0/1:10,1:8:29.29:41,0,29	0/0:10,0:3:4.46:0,4,37	0/0:30,0:3:3:0,3,27	0/0:27,0:25:5.82:0,6,35	0/1:28,2:30:1.39:1,0,102	0/0:22,0:22:6.44:0,6,47	0/0:56,0:52:99:0,141,1313	0/1:16,0:14:3.96:4,0,57	0/1:37,1:30:99:119,0,123	0/0:21,0:20:6.92:0,7,48	0/1:21,0:21:41.99:42,0,62	0/1:16,0:16:7.14:11,0,7	0/0:17,0:16:5.85:0,6,70	0/0:22,0:20:1.41:0,1,22	0/1:27,1:23:78.43:84,0,78	0/1:17,2:19:9.44:72,0,9	0/0:25,0:23:2.83:0,3,119	0/0:25,0:24:59.80:0,60,469	0/0:21,0:20:26.55:0,27,246	0/0:23,0:21:4.20:0,4,28	0/0:19,0:18:12.45:0,12,101	0/0:17,0:16:8.98:0,9,72	0/0:25,0:25:4:0,4,169	0/0:18,0:14:8.95:0,9,94	0/1:37,0:36:54.03:494,0,54	0/0:15,0:15:17.89:0,18,148	1/1:5,0:5:6.02:81,6,0
chr10	82828295	.	CAG	C	37.32	PASS	AB=0.947;AC=5;AF=0.093;AN=54;BaseQRankSum=5.173;DP=682;FS=4.320;HRun=0;HaplotypeScore=158.0008;InbreedingCoeff=0.1105;MQ=41.99;MQ0=24;MQRankSum=-1.544;QD=0.49;ReadPosRankSum=0.445;VQSLOD=2.6032;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:20.85:0,21,450	0/0:12,0:9:20.75:0,21,230	0/0:16,0:3:8.84:0,9,81	0/0:43,0:3:6.02:0,6,88	./.	0/0:26,4:30:16.60:0,17,378	0/0:22,0:22:8.73:0,9,145	0/0:56,0:54:99:0,138,1958	0/1:18,2:18:2.43:2,0,238	0/0:35,0:28:65.19:0,65,902	0/0:20,0:19:6.02:0,6,92	0/0:21,0:21:3.32:0,3,340	0/0:15,0:15:11.51:0,12,118	0/0:16,0:15:19.31:0,19,288	0/0:21,0:19:12.04:0,12,192	0/1:26,2:23:31.60:32,0,378	0/0:16,1:17:3.76:0,4,162	0/1:24,0:22:85.19:85,0,191	0/0:27,0:26:71.37:0,71,940	0/0:24,0:22:30.10:0,30,474	0/0:23,1:22:6.02:0,6,94	0/0:21,0:20:14.59:0,15,216	0/0:17,2:18:15.05:0,15,239	0/0:25,0:25:5.54:0,6,232	0/0:18,1:15:24.08:0,24,387	0/0:38,0:35:56.39:0,56,838	0/0:18,0:17:21.68:0,22,263	1/1:4,0:3:2.97:20,3,0
chr10	82828324	.	GAGAGACAGAGAGACAAAC	G	765.73	PASS	AB=0.667;AC=1;AF=0.019;AN=54;BaseQRankSum=5.592;DP=718;FS=5.493;HRun=0;HaplotypeScore=270.5890;InbreedingCoeff=-0.0251;MQ=51.19;MQ0=22;MQRankSum=0.223;QD=23.93;ReadPosRankSum=-0.306;VQSLOD=1.8082;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:74.07:0,74,1978	0/0:11,0:9:15.01:0,15,739	0/0:51,0:17:6.38:0,6,75	0/0:91,0:19:11.84:0,12,132	0/0:22,0:20:39.01:0,39,1974	0/0:26,0:26:48.60:0,49,3170	0/0:18,0:17:24.07:0,24,1036	0/0:39,0:39:45.12:0,45,977	0/0:18,0:16:30.10:0,30,1944	0/0:31,0:27:48.58:0,49,2252	0/0:24,0:22:46.54:0,47,2615	0/0:25,0:25:54.02:0,54,2966	0/0:19,0:19:30.07:0,30,1662	0/0:19,0:18:33.11:0,33,2283	0/0:15,0:15:18.06:0,18,1364	0/0:31,0:26:36.43:0,36,2645	0/0:17,0:17:21.01:0,21,979	0/0:19,0:19:24.05:0,24,1112	0/0:20,0:20:24.08:0,24,1339	0/0:20,0:19:39.07:0,39,1290	0/0:20,0:20:23.95:0,24,1160	0/0:23,0:22:47.15:0,47,2834	0/0:19,0:18:37.36:0,37,2165	0/0:26,0:26:33.11:0,33,2319	0/0:21,0:19:48:0,48,2914	0/1:16,16:29:99:840,0,187	0/0:21,0:20:38.16:0,38,1437	./.
chr10	82829562	.	AAGAGAGAGAGAGAGAGAGAGAGAGAG	A	898.68	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=3.775;DP=685;FS=4.242;HRun=0;HaplotypeScore=396.2256;InbreedingCoeff=0.5419;MQ=59.66;MQ0=10;MQRankSum=-3.178;QD=10.21;ReadPosRankSum=1.465;VQSLOD=0.8001;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:21.04:0,21,340	0/0:6,0:6:6.91:0,7,615	0/0:23,0:17:0.94:0,1,1	0/0:37,0:12:6.47:0,6,79	0/0:17,0:17:24.97:0,25,1393	0/0:29,0:29:63.20:0,63,5304	0/0:16,0:15:12.04:0,12,280	0/0:19,0:19:12.03:0,12,316	0/0:25,0:25:63.69:0,64,4801	0/0:24,0:23:42.14:0,42,2958	0/0:12,0:12:19:0,19,1098	0/0:24,0:24:42.14:0,42,3354	0/0:24,0:24:53.36:0,53,3091	0/0:33,0:32:46.08:0,46,3116	0/0:29,0:29:43.56:0,44,3198	0/0:33,0:33:75.21:0,75,5835	0/0:27,0:28:60.16:0,60,5401	0/0:17,0:17:42.11:0,42,3127	0/1:15,0:12:26.15:26,0,393	0/0:19,0:19:37.16:0,37,466	0/0:41,0:41:58.85:0,59,4142	0/0:29,0:29:34.03:0,34,2768	0/0:23,0:23:19.73:0,20,993	0/0:38,0:37:64.16:0,64,4549	0/0:30,0:26:54.61:0,55,2993	1/1:22,1:23:15:300,15,0	0/1:35,0:35:54.12:54,0,493	1/1:11,4:15:12.04:648,12,0
chr10	82829589	.	AGAGAGAGAGAGAGAGAGAGT	A	3665.96	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=4.228;DP=729;FS=2.633;HRun=0;HaplotypeScore=335.1182;InbreedingCoeff=0.8178;MQ=53.71;MQ0=15;MQRankSum=-1.625;QD=22.22;ReadPosRankSum=-2.196;VQSLOD=1.3927;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:25:52.02:620,52,0	0/0:7,0:7:12.97:0,13,575	0/0:16,0:5:0.33:0,0,99	0/0:25,0:8:10.32:0,10,153	0/0:27,0:27:57.47:0,57,1559	0/0:34,0:33:83.62:0,84,4304	1/1:20,0:19:47.37:579,47,0	1/1:21,0:21:11.99:642,12,0	0/0:36,0:36:96.29:0,96,3704	0/0:29,0:28:77.08:0,77,2373	0/0:17,0:17:33.53:0,34,783	0/0:28,0:28:57:0,57,2518	0/0:27,0:27:61.14:0,61,1907	0/0:33,0:31:69.01:0,69,2314	0/0:32,0:32:66.48:0,66,2407	0/0:40,0:40:99:0,109,4492	0/0:30,0:28:81.08:0,81,4254	0/0:16,0:16:44.32:0,44,2248	1/1:4,9:12:24.03:431,24,0	1/1:4,19:23:27.82:334,28,0	0/0:48,0:48:99:0,99,3378	0/0:27,0:27:54.04:0,54,2252	0/0:20,0:20:35.73:0,36,908	0/0:37,0:35:81.18:0,81,3238	0/0:35,0:30:66.15:0,66,2231	0/1:13,0:13:10.75:135,0,11	1/1:11,26:37:12.68:449,13,0	1/1:11,0:11:2.39:476,2,0
chr10	82829609	.	TGA	T	1265.22	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=10.885;DP=729;FS=11.116;HRun=0;HaplotypeScore=137.5208;InbreedingCoeff=0.4205;MQ=65.56;MQ0=7;MQRankSum=-2.119;QD=6.62;ReadPosRankSum=0.507;VQSLOD=2.4261;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:12.49:26,0,12	0/0:8,0:8:21.05:0,21,305	0/0:35,0:23:23.91:0,24,726	0/0:50,0:28:52.02:0,52,687	0/0:30,0:30:81.06:0,81,1179	0/0:29,0:28:75.59:0,76,1209	0/1:27,0:27:6.33:6,0,59	0/1:38,0:38:15.45:37,0,15	0/0:27,0:27:78.05:0,78,1205	0/0:31,0:31:78.25:0,78,1334	0/0:10,0:10:27.09:0,27,435	0/0:23,0:23:56.89:0,57,840	0/0:17,0:17:48.05:0,48,682	0/0:28,0:27:65.66:0,66,935	0/0:23,0:23:57.17:0,57,875	0/0:41,0:41:99:0,114,1744	0/0:28,0:27:63.31:0,63,1139	0/0:15,0:15:41.65:0,42,597	1/1:9,0:9:2.97:13,3,0	0/1:20,0:20:10.72:11,0,20	0/0:43,0:43:99:0,108,1698	0/0:22,0:22:51.16:0,51,797	0/0:16,0:15:41.15:0,41,582	0/0:34,0:33:55.26:0,55,1133	0/0:28,0:27:75.14:0,75,1129	1/1:0,25:25:72.23:980,72,0	0/1:30,0:30:10.10:10,0,37	1/1:0,12:12:27.03:337,27,0
chr10	82829834	.	A	AGT	34160.71	PASS	AB=0.950;AC=49;AF=0.875;AN=56;BaseQRankSum=-15.149;DP=1314;FS=2.172;HRun=0;HaplotypeScore=152.7141;InbreedingCoeff=0.8568;MQ=57.27;MQ0=32;MQRankSum=6.306;QD=29.70;ReadPosRankSum=5.928;VQSLOD=6.2031;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,59:71:79.05:1846,79,0	1/1:2,12:14:32.66:548,33,0	0/0:59,0:20:11.98:0,12,338	0/0:76,0:30:66.13:0,66,780	1/1:0,20:20:45.02:746,45,0	1/1:7,20:28:39.13:648,39,0	1/1:11,42:53:95.37:1582,95,0	1/1:13,40:53:99:1921,123,0	1/1:7,54:61:99:2144,130,0	1/1:7,44:50:99:2139,132,0	1/1:4,11:15:21.07:349,21,0	1/1:6,40:47:92.24:1542,92,0	1/1:11,40:49:9.17:1221,9,0	1/1:3,52:56:97.61:2154,98,0	1/1:12,68:80:99:2692,163,0	1/1:8,46:56:99:1845,111,0	1/1:3,39:43:99:1616,100,0	1/1:6,26:30:32.66:593,33,0	1/1:14,8:21:36.12:571,36,0	1/1:1,26:27:75.26:1244,75,0	1/1:29,99:127:99:3375,205,0	1/1:3,37:40:87.30:1446,87,0	1/1:3,24:27:51.17:843,51,0	1/1:10,43:53:75.25:1246,75,0	1/1:4,21:25:8.55:707,9,0	0/1:53,3:57:2.41:2,0,1550	1/1:5,28:34:69.24:1141,69,0	0/0:27,0:27:75.21:0,75,928
chr10	82830477	.	T	TATTTATTTATTC	7400.23	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-5.791;DP=556;FS=1.323;HRun=0;HaplotypeScore=156.6615;InbreedingCoeff=0.8557;MQ=54.59;MQ0=1;MQRankSum=-4.962;QD=38.54;ReadPosRankSum=-3.702;VQSLOD=3.7692;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:24:17.99:876,18,0	0/0:8,0:8:24.07:0,24,808	0/0:13,0:9:23.70:0,24,308	0/0:14,0:8:14.15:0,14,165	0/0:25,0:25:72.17:0,72,1940	0/0:25,0:25:69.05:0,69,1495	1/1:0,9:12:3.01:160,3,0	1/1:47,0:46:99:1500,120,0	0/0:20,0:20:57.07:0,57,1199	0/0:29,0:29:78.29:0,78,2042	0/0:21,0:21:63.18:0,63,1632	0/0:16,0:15:42.14:0,42,1182	0/0:13,0:13:36.07:0,36,825	0/0:13,0:13:39.07:0,39,996	0/0:25,0:25:60.16:0,60,1494	0/0:19,0:19:54.10:0,54,1443	0/0:29,0:29:84.10:0,84,2148	0/0:21,0:21:57.11:0,57,1342	1/1:2,19:25:69.16:2425,69,0	1/1:0,11:16:35.71:616,36,0	0/0:6,0:6:12.01:0,12,189	0/0:19,0:19:57.15:0,57,1295	0/0:19,0:19:54.04:0,54,1306	0/1:10,0:10:24.65:25,0,567	0/0:29,0:29:84.24:0,84,2066	1/1:15,0:15:42:552,42,0	1/1:4,16:23:15.05:919,15,0	1/1:0,0:20:6.02:327,6,0
chr10	82831329	.	TGTTG	T	864.70	PASS	AB=0.974;AC=18;AF=0.321;AN=56;BaseQRankSum=-8.665;DP=516;FS=0.581;HRun=0;HaplotypeScore=141.0608;InbreedingCoeff=-0.3011;MQ=64.88;MQ0=1;MQRankSum=-0.307;QD=2.91;ReadPosRankSum=-9.283;VQSLOD=0.1179;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:33.70:34,0,810	0/1:12,0:12:5.90:6,0,268	0/0:32,0:23:26.18:0,26,324	0/0:31,0:25:27.44:0,27,471	0/0:16,0:16:30.10:0,30,486	0/1:18,0:18:30.79:31,0,541	0/0:19,0:19:11.14:0,11,507	0/1:26,0:26:99:120,0,112	0/0:15,0:15:7.95:0,8,373	0/1:18,0:18:21.81:22,0,411	0/0:14,0:14:37.01:0,37,593	0/0:19,0:19:36.09:0,36,537	0/0:5,0:5:12.04:0,12,195	0/1:13,0:13:0.91:1,0,298	0/1:15,0:15:22.87:23,0,307	0/1:14,0:14:0.90:1,0,323	0/1:27,0:27:39.90:40,0,713	0/1:20,0:20:97.77:98,0,343	0/1:15,0:13:32.87:33,0,212	0/1:12,0:12:12.90:13,0,312	0/0:35,0:35:4.31:0,4,1043	0/1:15,0:15:80.77:81,0,374	0/0:12,0:12:23.90:0,24,309	0/1:28,0:28:14.76:15,0,741	0/0:21,0:21:42.14:0,42,683	0/1:4,10:14:13.37:386,0,13	0/1:13,0:13:19.87:20,0,329	1/1:1,3:4:6.02:98,6,0
chr10	82832213	.	AT	A	9692.78	PASS	AB=0.542;AC=39;AF=0.696;AN=56;BaseQRankSum=5.641;DP=629;FS=3.224;HRun=10;HaplotypeScore=74.8651;InbreedingCoeff=0.9300;MQ=73.31;MQ0=1;MQRankSum=-1.184;QD=21.26;ReadPosRankSum=5.969;VQSLOD=5.3149;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:87.22:0,87,953	1/1:0,15:15:41.99:364,42,0	0/0:15,0:16:29.85:0,30,284	0/0:16,0:15:23.93:0,24,247	1/1:1,25:26:68.97:599,69,0	1/1:2,27:29:65.97:573,66,0	0/0:14,0:14:33.09:0,33,365	0/0:28,0:27:69.17:0,69,755	1/1:2,23:25:62.98:547,63,0	1/1:3,22:25:65.98:573,66,0	1/1:2,16:18:44.98:391,45,0	1/1:3,19:22:56.99:494,57,0	1/1:2,12:14:35.99:313,36,0	0/1:2,11:13:6.19:181,0,6	1/1:2,28:30:33.02:649,33,0	1/1:0,13:13:35.99:313,36,0	1/1:3,36:39:99:886,102,0	1/1:4,33:38:95.01:813,95,0	0/0:19,0:19:45.12:0,45,498	0/0:14,0:14:30.08:0,30,332	1/1:7,18:25:44.97:391,45,0	1/1:2,10:12:29.99:260,30,0	1/1:5,19:24:53.99:469,54,0	1/1:2,25:27:48.49:576,48,0	1/1:2,25:27:68.97:599,69,0	1/1:4,20:24:59.96:521,60,0	0/0:25,1:27:37.40:0,37,608	1/1:2,8:10:20.99:182,21,0
chr10	82832992	.	TACACACACAC	T	6151.21	PASS	AB=0.735;AC=35;AF=0.648;AN=54;BaseQRankSum=2.883;DP=661;FS=3.951;HRun=0;HaplotypeScore=198.1346;InbreedingCoeff=0.6671;MQ=57.66;MQ0=14;MQRankSum=-7.155;QD=17.63;ReadPosRankSum=2.953;VQSLOD=4.0430;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:35:30.09:0,30,674	1/1:5,5:10:14.60:444,15,0	./.	0/0:45,0:30:3.01:0,3,43	1/1:11,0:17:3.01:30,3,0	1/1:9,7:14:12.04:356,12,0	0/0:28,0:41:54.19:0,54,1696	0/0:35,0:35:22.87:0,23,425	1/1:15,2:26:11.81:237,12,0	1/1:16,10:26:21.04:495,21,0	1/1:8,4:12:9.03:267,9,0	1/1:19,11:30:20.64:621,21,0	1/1:15,9:23:12.04:356,12,0	1/1:10,6:16:21.07:544,21,0	1/1:16,12:31:39.13:1099,39,0	1/1:15,4:19:8.39:266,8,0	0/1:23,12:33:9.66:537,0,10	1/1:14,3:16:4.43:175,4,0	0/0:14,0:20:21.07:0,21,651	0/0:9,0:12:18.06:0,18,542	0/0:36,10:46:2.50:0,3,65	1/1:16,5:20:5.54:177,6,0	1/1:5,6:11:3.01:89,3,0	0/0:21,3:24:0.46:0,0,1	1/1:12,2:12:6.02:177,6,0	1/1:10,0:15:7.27:143,7,0	0/0:16,0:26:33.68:0,34,918	1/1:0,0:5:6.02:140,6,0
chr10	82833289	.	AGG	A	2834.30	PASS	AB=0.586;AC=15;AF=0.268;AN=56;BaseQRankSum=12.971;DP=484;FS=11.163;HRun=6;HaplotypeScore=65.4137;InbreedingCoeff=0.9000;MQ=63.99;MQ0=7;MQRankSum=-3.118;QD=24.65;ReadPosRankSum=1.391;VQSLOD=1.3445;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,20:26:48.09:620,48,0	0/0:7,0:7:12.04:0,12,216	0/0:9,0:7:18.06:0,18,316	0/0:14,0:11:33.01:0,33,472	0/0:25,0:25:63.22:0,63,1126	0/0:12,0:12:36.12:0,36,648	1/1:4,9:12:27.09:360,27,0	1/1:5,13:12:27.07:345,27,0	0/0:16,0:16:39.13:0,39,702	0/0:18,0:18:54.19:0,54,970	0/0:19,0:19:45.13:0,45,766	0/0:22,0:22:63.21:0,63,1106	0/0:23,0:23:60.21:0,60,1080	0/0:17,0:17:51.17:0,51,890	0/0:18,0:18:48.16:0,48,864	0/0:22,0:22:60.21:0,60,1080	0/0:25,1:26:38.29:0,38,1301	0/0:15,0:15:45.15:0,45,810	1/1:4,9:13:30.09:386,30,0	1/1:2,10:11:30.10:400,30,0	0/0:20,0:20:60.21:0,60,1076	0/0:20,0:20:54.18:0,54,963	0/0:12,0:12:30.09:0,30,511	0/0:38,0:38:99:0,114,2048	0/0:16,0:16:48.16:0,48,855	0/1:5,12:14:17.97:404,0,18	1/1:3,8:11:24.06:320,24,0	1/1:0,5:5:15.05:200,15,0
chr10	82833474	.	CAAAAA	C	11238.38	PASS	AB=0.523;AC=34;AF=0.607;AN=56;BaseQRankSum=1.884;DP=404;FS=23.206;HRun=5;HaplotypeScore=82.2041;InbreedingCoeff=0.7868;MQ=53.25;MQ0=4;MQRankSum=-3.949;QD=40.57;ReadPosRankSum=6.452;VQSLOD=0.8278;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:9:15.01:0,15,187	1/1:0,3:3:8.99:157,9,0	0/0:11,0:6:14.24:0,14,154	0/0:19,0:8:17.48:0,17,178	1/1:0,18:18:48.03:900,48,0	1/1:0,11:11:24.08:546,24,0	0/0:3,0:2:3.01:0,3,80	0/0:25,0:15:38.95:0,39,563	1/1:0,14:14:9.03:205,9,0	1/1:0,17:17:45.11:932,45,0	1/1:0,18:18:45.02:844,45,0	0/1:1,11:12:15.68:429,0,16	1/1:0,14:14:30.10:656,30,0	1/1:0,17:17:36.12:793,36,0	1/1:0,18:18:24.08:520,24,0	1/1:0,19:19:33.11:738,33,0	1/1:0,29:29:63.01:1301,63,0	1/1:0,20:20:39.13:888,39,0	0/0:15,0:11:27.06:0,27,593	0/0:7,0:6:17.99:0,18,256	0/1:1,10:11:20.60:209,0,21	1/1:0,16:16:33.03:651,33,0	1/1:0,11:11:27:447,27,0	1/1:0,8:8:6.02:122,6,0	1/1:0,21:21:42.14:903,42,0	0/0:15,0:12:36.07:0,36,510	0/0:13,0:10:26.98:0,27,323	0/0:7,0:7:21.02:0,21,387
chr10	82834988	.	T	TGC	2214.61	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=-1.690;DP=564;FS=3.971;HRun=0;HaplotypeScore=134.6387;InbreedingCoeff=0.5215;MQ=56.14;MQ0=11;MQRankSum=0.003;QD=6.94;ReadPosRankSum=-1.519;VQSLOD=3.1550;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:44,0:44:48.89:361,49,0	1/1:2,0:2:2.74:12,3,0	0/0:29,0:12:32.92:0,33,291	0/0:30,0:14:22.11:0,22,230	0/0:19,0:18:10.98:0,11,133	0/0:17,0:15:26.24:0,26,219	1/1:28,0:28:31.81:250,32,0	1/1:25,0:24:59.34:413,59,0	0/1:15,0:15:12.81:13,0,85	0/0:26,0:26:51.70:0,52,463	0/0:12,0:11:11.98:0,12,99	0/1:25,0:24:0.23:0,0,185	0/0:13,0:13:3.63:0,4,95	0/0:12,0:12:17.87:0,18,138	0/1:19,0:19:10.19:10,0,192	0/0:21,0:21:20.50:0,21,255	0/1:21,0:19:9.09:9,0,153	0/0:12,0:12:24.93:0,25,206	1/1:13,0:13:30.82:196,31,0	1/1:19,0:19:16.66:119,17,0	0/1:25,0:24:3.65:4,0,157	0/0:20,0:20:26.95:0,27,220	0/0:14,0:14:20.93:0,21,165	0/0:20,0:20:2.20:0,2,120	0/1:22,0:22:28.15:28,0,186	1/1:7,20:27:32.33:649,32,0	1/1:23,0:23:36.81:186,37,0	1/1:5,6:11:3.43:158,3,0
chr10	82834989	.	GCACACACACA	G	2342.04	PASS	AB=0.929;AC=9;AF=0.173;AN=52;BaseQRankSum=5.370;DP=665;FS=0.751;HRun=0;HaplotypeScore=212.1275;InbreedingCoeff=0.7136;MQ=52.43;MQ0=12;MQRankSum=-6.248;QD=18.59;ReadPosRankSum=3.574;VQSLOD=2.2609;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,16:43:15.05:429,15,0	0/0:5,0:5:9.92:0,10,314	./.	./.	0/0:15,0:20:9.50:0,10,252	0/0:20,0:18:16.87:0,17,520	1/1:18,7:28:11.31:338,11,0	0/0:25,0:24:3.90:0,4,112	0/0:19,0:19:15.05:0,15,586	0/0:31,0:31:60.16:0,60,2325	0/0:14,0:18:5.76:0,6,169	0/0:33,0:32:27.07:0,27,1065	0/0:14,0:18:24.97:0,25,900	0/0:24,0:24:7.27:0,7,193	0/0:23,0:28:12.04:0,12,332	0/0:24,0:30:20.60:0,21,540	0/0:24,0:22:18.41:0,18,561	0/0:16,0:16:21.96:0,22,813	0/1:12,1:13:14.06:84,0,14	1/1:8,9:19:18.06:519,18,0	0/0:30,0:29:18.06:0,18,813	0/0:21,0:23:14.72:0,15,548	0/0:16,0:16:6.02:0,6,150	0/0:29,0:28:20.68:0,21,837	0/0:28,0:28:23.85:0,24,936	0/0:29,0:29:60.20:0,60,2178	1/1:9,12:23:39.13:1127,39,0	0/0:11,0:11:18.06:0,18,784
chr10	82835152	.	G	GC	7091.83	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-12.969;DP=717;FS=0.315;HRun=5;HaplotypeScore=73.0310;InbreedingCoeff=0.9932;MQ=84.50;MQ0=0;MQRankSum=-1.830;QD=33.14;ReadPosRankSum=-2.427;VQSLOD=4.3298;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,41:43:99:1458,111,0	0/0:9,0:9:24.06:0,24,258	0/0:21,0:21:48.10:0,48,506	0/0:27,0:27:66.01:0,66,666	0/0:21,0:21:45.11:0,45,484	0/0:20,0:20:42.10:0,42,451	1/1:3,30:33:81.26:1066,81,0	1/1:5,35:40:99:1338,105,0	0/0:29,0:29:84.21:0,84,902	0/0:29,0:29:75.12:0,75,779	0/0:11,0:11:27.07:0,27,290	0/0:40,0:40:99:0,105,1116	0/0:20,0:20:54.13:0,54,580	0/0:31,0:31:78.17:0,78,828	0/0:30,0:30:84.21:0,84,903	0/0:42,0:42:99:0,117,1248	0/0:31,0:30:81.18:0,81,862	0/0:15,0:15:45.11:0,45,484	1/1:1,15:16:45.11:561,45,0	1/1:3,18:21:60.15:763,60,0	0/0:45,0:45:99:0,108,1152	0/0:11,0:11:30.08:0,30,322	0/0:15,0:15:42.09:0,42,443	0/0:40,0:40:99:0,111,1193	0/0:16,0:16:42.10:0,42,451	1/1:5,25:30:13.74:881,14,0	1/1:0,26:26:63.20:829,63,0	1/1:0,5:5:15.05:197,15,0
chr10	82835609	.	AT	A	12044.03	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.666;DP=560;FS=14.796;HRun=9;HaplotypeScore=67.9255;InbreedingCoeff=0.9167;MQ=66.94;MQ0=0;MQRankSum=-5.822;QD=22.35;ReadPosRankSum=4.355;VQSLOD=4.3006;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,45:47:99:1098,120,0	1/1:1,8:9:21.01:192,21,0	0/0:14,0:14:5.13:0,5,293	0/0:7,0:6:14.93:0,15,141	1/1:3,19:22:50.92:455,51,0	1/1:3,25:28:66.03:603,66,0	1/1:4,14:18:36.01:330,36,0	1/1:4,25:29:74.98:671,75,0	1/1:2,16:18:39.01:357,39,0	1/1:4,19:23:57.02:522,57,0	1/1:1,18:19:54.03:494,54,0	1/1:2,21:23:44.98:411,45,0	1/1:0,8:8:24.01:220,24,0	1/1:2,16:18:45.02:411,45,0	1/1:2,13:15:33.02:301,33,0	1/1:2,12:14:30.01:274,30,0	1/1:4,27:31:81.04:741,81,0	1/1:3,18:21:48.02:439,48,0	1/1:5,16:21:48.02:439,48,0	1/1:4,18:22:54.03:493,54,0	1/1:2,23:25:66.03:604,66,0	1/1:0,10:10:23.93:219,24,0	1/1:2,19:21:54.03:494,54,0	1/1:0,15:15:39.02:357,39,0	1/1:2,20:22:57.03:522,57,0	1/1:3,24:27:72.02:654,72,0	1/1:2,21:23:60.03:549,60,0	1/1:0,10:10:21.01:192,21,0
chr10	82835907	.	GA	G	8097.83	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.869;DP=462;FS=0.000;HRun=9;HaplotypeScore=69.2061;InbreedingCoeff=0.7521;MQ=53.44;MQ0=14;MQRankSum=-1.470;QD=18.45;ReadPosRankSum=3.240;VQSLOD=5.1673;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,29:31:75.03:686,75,0	1/1:2,3:6:8.66:68,9,0	0/0:13,0:4:8.96:0,9,78	0/0:10,0:2:3.01:0,3,35	1/1:10,10:19:41.85:358,42,0	1/1:3,19:22:54.01:489,54,0	1/1:5,22:26:42.02:384,42,0	1/1:7,19:25:51.02:466,51,0	1/1:1,5:6:15.01:137,15,0	1/1:6,12:18:24.52:318,25,0	1/1:9,11:20:35.99:325,36,0	1/1:3,14:16:36.02:328,36,0	1/1:3,5:8:8.99:82,9,0	1/1:2,8:10:27.01:247,27,0	1/1:3,19:22:54.02:494,54,0	1/1:11,14:23:54.02:490,54,0	1/1:6,16:21:53.98:485,54,0	1/1:8,13:21:53.68:475,54,0	1/1:8,13:19:36.13:331,36,0	1/1:3,18:21:54.03:494,54,0	1/1:6,4:10:12:109,12,0	1/1:6,9:15:24:219,24,0	1/1:4,5:9:18:164,18,0	1/1:2,6:8:20.98:184,21,0	1/1:2,6:8:12.01:110,12,0	1/1:5,9:14:20.99:188,21,0	1/1:7,16:23:39.01:355,39,0	1/1:1,5:6:12.01:110,12,0
chr10	82835924	.	G	GAA	7991.72	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-2.463;DP=489;FS=0.816;HRun=9;HaplotypeScore=90.2047;InbreedingCoeff=0.9705;MQ=59.95;MQ0=5;MQRankSum=-4.670;QD=30.16;ReadPosRankSum=3.756;VQSLOD=5.1499;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:84.16:0,84,885	1/1:2,3:5:12.04:167,12,0	0/0:20,0:11:30.99:0,31,298	0/0:9,0:5:6.89:0,7,60	1/1:6,10:17:33.07:457,33,0	1/1:6,19:25:51.17:772,51,0	0/0:28,0:28:69.14:0,69,725	0/0:34,0:34:26.79:0,27,679	1/1:2,7:9:18.05:277,18,0	1/1:14,12:25:53.87:764,54,0	1/1:2,10:13:33.06:449,33,0	1/1:8,7:16:27.08:397,27,0	1/1:3,3:6:15.05:213,15,0	1/1:3,6:9:18.06:277,18,0	1/1:5,21:26:60.03:891,60,0	1/1:4,18:21:39.09:574,39,0	1/1:3,19:22:48.16:721,48,0	1/1:2,16:18:47.19:699,47,0	0/0:18,0:19:38.50:0,39,392	0/0:23,0:24:59.87:0,60,617	1/1:4,2:11:14.64:148,15,0	1/1:2,9:11:24.04:343,24,0	1/1:1,9:10:24.04:336,24,0	1/1:2,8:10:21.07:323,21,0	1/1:5,3:8:15:184,15,0	0/0:18,0:18:41.89:0,42,446	0/0:22,0:22:45:0,45,456	0/0:10,0:10:24.06:0,24,255
chr10	82836777	.	A	AGGTAAGGTT	30108.29	PASS	AB=0.875;AC=37;AF=0.661;AN=56;BaseQRankSum=-7.148;DP=611;FS=82.261;HRun=0;HaplotypeScore=172.8544;InbreedingCoeff=0.9074;MQ=88.84;MQ0=0;MQRankSum=-17.592;QD=77.80;ReadPosRankSum=-0.573;VQSLOD=1.8224;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,3468	1/1:7,2:9:8.99:300,9,0	0/0:31,0:31:66.23:0,66,1831	0/0:26,0:27:46.46:0,46,1529	1/1:6,6:12:24.04:1000,24,0	1/1:5,10:14:39.09:1696,39,0	0/0:35,0:35:75.24:0,75,2076	0/0:22,0:22:51.16:0,51,1340	1/1:7,17:25:54.18:2511,54,0	1/1:9,7:17:36.11:1450,36,0	1/1:4,7:13:15.05:703,15,0	1/1:11,11:25:39.13:1703,39,0	1/1:9,12:21:41.80:1782,42,0	1/1:12,15:28:51:2320,51,0	1/1:7,15:22:54.18:2386,54,0	1/1:7,12:22:48.16:2128,48,0	1/1:19,10:29:48.12:2131,48,0	1/1:9,10:19:33.11:1490,33,0	0/0:22,0:22:57.20:0,57,1509	0/0:20,0:20:54.08:0,54,1367	1/1:20,11:33:48.16:2078,48,0	1/1:13,8:22:30.06:1283,30,0	1/1:3,9:12:27.09:1263,27,0	1/1:14,11:25:44.83:1837,45,0	1/1:7,9:17:39.13:1763,39,0	0/1:18,3:21:99:285,0,1397	0/0:19,0:18:57.20:0,57,1614	0/0:6,0:6:18.06:0,18,523
chr10	82837516	.	GCATTCATT	G	14044.58	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=15.846;DP=600;FS=96.999;HRun=0;HaplotypeScore=163.0142;InbreedingCoeff=0.9918;MQ=55.22;MQ0=0;MQRankSum=-15.700;QD=42.18;ReadPosRankSum=3.052;VQSLOD=1.0131;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,117,4597	1/1:0,12:12:24.08:646,24,0	0/0:16,0:15:27.08:0,27,901	0/0:14,0:13:36.08:0,36,1235	1/1:3,10:13:24.08:582,24,0	1/1:2,9:11:18.06:461,18,0	0/0:19,0:19:48.12:0,48,1616	0/0:32,0:32:81.27:0,81,3095	1/1:2,21:23:48.16:1271,48,0	1/1:1,20:21:54.10:1392,54,0	1/1:2,15:17:36.12:970,36,0	1/1:6,14:20:30.10:799,30,0	1/1:5,15:21:54.14:1400,54,0	1/1:8,14:22:33.11:880,33,0	1/1:1,17:18:36.12:959,36,0	1/1:5,13:18:18.06:474,18,0	1/1:6,9:15:18.06:452,18,0	1/1:8,11:19:14.97:311,15,0	0/0:13,0:13:36.08:0,36,1329	0/0:32,0:32:84.27:0,84,3297	1/1:11,12:24:24.08:488,24,0	1/1:2,18:20:39.13:976,39,0	1/1:3,13:16:30.10:808,30,0	1/1:12,13:25:26.63:626,27,0	1/1:5,13:18:21.07:549,21,0	0/0:34,0:34:99:0,102,3961	0/0:44,0:44:99:0,120,4570	0/0:15,0:15:27.09:0,27,1099
chr10	82838537	.	G	GTGTGTGT	4432.88	PASS	AB=0.742;AC=25;AF=0.446;AN=56;BaseQRankSum=9.314;DP=462;FS=14.983;HRun=0;HaplotypeScore=136.3969;InbreedingCoeff=-0.6399;MQ=53.38;MQ0=13;MQRankSum=-8.416;QD=11.70;ReadPosRankSum=-0.045;VQSLOD=3.2205;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,1:21:20.92:0,21,284	0/1:3,0:6:62.25:162,0,62	0/0:20,0:8:23.28:0,23,274	0/0:24,0:11:14.82:0,15,233	1/1:4,0:9:6.02:111,6,0	0/1:9,0:21:99:399,0,179	0/1:7,1:16:90.72:91,0,119	0/1:36,0:36:99:361,0,858	0/1:5,0:9:33.97:34,0,199	0/1:15,0:24:99:554,0,374	0/1:7,0:17:41.93:42,0,130	0/1:6,0:14:99:220,0,142	0/1:7,0:12:99:265,0,204	0/1:6,0:8:99:134,0,101	0/1:9,0:13:82.94:83,0,233	0/1:5,0:11:99:128,0,133	0/1:12,0:23:99:247,0,234	0/1:20,0:30:79.78:80,0,589	0/1:16,0:15:99:211,0,364	0/1:10,0:17:99:235,0,187	0/0:10,0:17:8.85:0,9,119	0/1:4,0:6:0:0,0,0	0/1:3,0:6:34.06:49,0,34	0/1:14,0:19:22.53:23,0,177	0/1:7,0:14:99:187,0,227	0/1:12,0:12:99:300,0,204	0/1:14,0:21:99:386,0,340	0/1:10,0:10:99:131,0,194
chr10	82838573	.	TACCAA	T	869.85	PASS	AB=0.933;AC=11;AF=0.196;AN=56;BaseQRankSum=6.984;DP=422;FS=0.627;HRun=0;HaplotypeScore=103.4007;InbreedingCoeff=-0.2585;MQ=49.74;MQ0=12;MQRankSum=-7.324;QD=5.30;ReadPosRankSum=-5.273;VQSLOD=-0.3804;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:17:36.12:0,36,1078	0/0:6,0:6:16.61:0,17,392	0/0:24,0:4:12.04:0,12,310	0/0:35,0:14:39.10:0,39,1087	0/0:11,0:11:9.22:0,9,597	0/1:22,0:21:28.03:28,0,880	0/1:20,0:20:99:183,0,941	0/1:28,5:33:99:149,0,2431	0/0:5,0:4:6.02:0,6,174	0/0:16,0:16:48.16:0,48,1382	0/0:13,0:13:20.20:0,20,440	0/1:12,0:12:8.60:9,0,544	0/0:9,0:9:27.09:0,27,692	0/0:10,0:10:21.07:0,21,671	0/0:17,0:17:27.95:0,28,971	0/1:13,0:13:21.09:21,0,912	0/0:19,0:19:43.38:0,43,1094	0/0:22,0:22:51.18:0,51,1609	0/1:6,1:7:48.78:49,0,582	0/1:15,0:15:66.54:67,0,744	0/0:22,0:22:41.80:0,42,1309	0/0:4,0:4:3.01:0,3,60	0/0:9,0:9:9.20:0,9,390	0/0:18,0:18:39.05:0,39,1203	0/1:8,0:8:5.59:6,0,164	0/1:9,3:11:99:172,0,569	0/1:12,0:11:84.91:85,0,370	0/1:6,4:10:99:246,0,569
chr10	82838908	.	C	CAT	18035.35	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.755;DP=483;FS=3.405;HRun=0;HaplotypeScore=59.3769;InbreedingCoeff=0.9188;MQ=54.01;MQ0=6;MQRankSum=0.471;QD=42.04;ReadPosRankSum=4.520;VQSLOD=6.6639;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:25:48.16:858,48,0	1/1:0,9:9:24.08:439,24,0	0/0:29,0:18:32.97:0,33,448	0/0:25,0:11:16.37:0,16,172	1/1:2,19:21:39.13:713,39,0	1/1:0,20:20:51.17:934,51,0	1/1:5,16:21:10.13:462,10,0	1/1:3,32:35:96.33:1743,96,0	1/1:0,10:10:24.08:440,24,0	1/1:3,21:24:66.21:1163,66,0	1/1:2,7:9:12.04:219,12,0	1/1:2,13:15:30.10:550,30,0	1/1:0,9:9:21.07:385,21,0	1/1:1,14:16:35.99:655,36,0	1/1:1,20:21:54.19:989,54,0	1/1:1,14:15:39.13:715,39,0	1/1:1,25:26:69.24:1260,69,0	1/1:2,21:22:51.17:935,51,0	1/1:4,13:17:45.15:786,45,0	1/1:2,13:15:24.08:439,24,0	1/1:1,14:15:39.13:714,39,0	1/1:1,8:9:21.07:380,21,0	1/1:1,9:10:27.09:494,27,0	1/1:0,16:17:36.12:654,36,0	1/1:0,8:9:21.07:384,21,0	1/1:1,11:12:36.11:625,36,0	1/1:0,18:19:51.17:935,51,0	1/1:1,5:6:9.03:165,9,0
chr10	82839229	.	G	GCAA	6304.96	PASS	AB=0.617;AC=27;AF=0.482;AN=56;BaseQRankSum=6.013;DP=412;FS=7.917;HRun=0;HaplotypeScore=95.3154;InbreedingCoeff=0.2273;MQ=58.84;MQ0=22;MQRankSum=-8.261;QD=25.53;ReadPosRankSum=4.124;VQSLOD=4.3741;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:33.11:0,33,571	1/1:0,6:6:15.05:273,15,0	0/0:25,0:10:20.95:0,21,360	0/0:22,0:9:15.64:0,16,185	1/1:6,19:26:20.22:819,20,0	0/1:4,6:10:39.26:409,0,39	0/0:14,0:13:30.09:0,30,493	0/0:28,0:27:66.18:0,66,1060	0/1:3,7:10:23.73:260,0,24	0/1:7,9:15:74.46:407,0,74	1/1:1,10:10:30.02:491,30,0	1/1:2,6:6:14.25:265,14,0	0/1:4,4:13:20.71:582,0,21	0/1:2,6:9:23.68:231,0,24	0/1:2,15:18:5.55:737,0,6	1/1:1,2:13:15.05:299,15,0	0/1:9,9:17:79.88:217,0,80	0/1:2,9:13:4.70:331,0,5	0/0:16,0:14:31.35:0,31,536	0/0:10,0:9:26.96:0,27,447	0/1:2,5:9:4.92:144,0,5	1/1:1,10:11:27.09:499,27,0	1/1:1,7:7:12.51:209,13,0	1/1:4,10:15:3.01:54,3,0	0/1:3,0:15:45.84:56,0,46	0/1:13,1:13:20.70:21,0,542	0/0:10,0:10:17.98:0,18,331	0/0:14,0:14:33.11:0,33,576
chr10	82840003	.	TC	T	8461.73	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=9.727;DP=591;FS=2.789;HRun=8;HaplotypeScore=65.2297;InbreedingCoeff=0.9996;MQ=83.44;MQ0=1;MQRankSum=-1.872;QD=24.25;ReadPosRankSum=5.609;VQSLOD=5.3041;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,1195	1/1:0,12:12:29.74:289,30,0	0/0:23,0:22:53.60:0,54,573	0/0:24,0:23:32.56:0,33,423	1/1:2,21:23:60.09:578,60,0	1/1:3,26:29:72.11:695,72,0	0/0:20,0:20:57.16:0,57,675	0/0:28,0:28:66.11:0,66,742	1/1:1,16:17:48.08:463,48,0	1/1:4,12:16:39.02:364,39,0	1/1:5,10:15:30.04:289,30,0	1/1:0,10:10:30.05:290,30,0	1/1:2,15:17:39.06:376,39,0	1/1:0,23:23:45.07:434,45,0	1/1:2,29:31:81.13:782,81,0	1/1:1,24:25:60.05:569,60,0	1/1:1,22:23:66.11:637,66,0	1/1:0,21:21:63.10:608,63,0	0/0:22,0:22:57.16:0,57,674	0/0:24,0:24:63.19:0,63,752	1/1:3,20:23:57.09:550,57,0	1/1:4,16:20:45.07:434,45,0	1/1:0,12:12:33.05:319,33,0	1/1:3,16:19:51.08:492,51,0	1/1:2,11:13:30.05:290,30,0	0/0:23,1:24:43.19:0,43,774	0/0:22,0:22:63.19:0,63,758	0/0:19,0:19:50.71:0,51,565
chr10	82840210	.	G	GTTTTT	8148.67	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.551;DP=433;FS=4.730;HRun=13;HaplotypeScore=140.3820;InbreedingCoeff=0.5672;MQ=62.37;MQ0=1;MQRankSum=-1.184;QD=19.92;ReadPosRankSum=0.889;VQSLOD=2.7878;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,4:25:52.06:995,52,0	1/1:7,0:7:10.98:105,11,0	0/0:8,0:8:5.75:0,6,54	0/0:14,0:12:5.84:0,6,45	1/1:25,0:23:47.76:554,48,0	1/1:18,0:18:35.74:507,36,0	1/1:9,10:20:21.07:445,21,0	1/1:12,3:18:26.10:460,26,0	1/1:9,0:9:3.01:66,3,0	1/1:12,0:12:33.62:373,34,0	1/1:14,0:13:28.14:335,28,0	1/1:15,0:16:9.03:200,9,0	1/1:8,0:8:16.66:187,17,0	1/1:12,0:12:12.04:263,12,0	1/1:16,0:16:14.07:268,14,0	1/1:20,0:20:24:477,24,0	1/1:17,0:17:12.04:262,12,0	1/1:8,0:8:3.01:66,3,0	1/1:12,4:17:26.67:438,27,0	1/1:10,0:9:21.07:412,21,0	1/1:14,0:14:2.88:16,3,0	1/1:16,0:16:37:467,37,0	1/1:17,0:16:23.56:222,24,0	1/1:19,0:18:6.02:131,6,0	1/1:16,0:16:24.92:276,25,0	1/1:8,0:16:19.95:133,20,0	1/1:8,11:20:16.61:367,17,0	1/1:8,0:15:16.73:124,17,0
chr10	82840214	.	T	TTTTTTTGTTTTGTTTTG	20433.48	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-4.449;DP=454;FS=1.941;HRun=0;HaplotypeScore=179.4456;InbreedingCoeff=0.4199;MQ=60.10;MQ0=1;MQRankSum=-5.109;QD=53.77;ReadPosRankSum=4.247;VQSLOD=4.6383;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:99:153,0,217	1/1:4,0:7:14.95:547,15,0	0/0:12,0:7:11.68:0,12,110	0/0:18,0:13:21.20:0,21,153	1/1:20,0:24:57.18:2423,57,0	1/1:11,0:18:42.10:2236,42,0	0/1:21,0:19:70.69:71,0,120	0/0:18,0:18:5.82:0,6,292	1/1:0,7:10:3.01:237,3,0	1/1:6,0:13:39.13:1672,39,0	1/1:10,0:13:36.08:1381,36,0	1/1:2,9:17:9.02:705,9,0	1/1:6,0:8:18.04:759,18,0	1/1:3,7:14:11.96:936,12,0	1/1:1,8:22:12.51:930,13,0	1/1:1,12:23:24.08:1731,24,0	1/1:5,10:19:12.01:914,12,0	1/1:0,4:14:3.01:238,3,0	0/1:15,0:15:29.11:101,0,29	0/1:11,0:9:16:115,0,16	1/1:10,0:12:5.95:301,6,0	1/1:8,0:17:42.03:1985,42,0	1/1:14,0:17:38.93:986,39,0	1/1:6,8:18:8.99:711,9,0	1/1:8,0:15:30.05:1216,30,0	0/0:16,0:16:15.46:0,15,380	0/1:20,0:20:85.80:86,0,95	0/0:10,0:10:16.27:0,16,304
chr10	82840220	.	T	TG	1642.28	PASS	AB=0.767;AC=20;AF=0.357;AN=56;BaseQRankSum=8.091;DP=389;FS=53.929;HRun=0;HaplotypeScore=90.1576;InbreedingCoeff=-0.1092;MQ=60.96;MQ0=1;MQRankSum=-4.136;QD=8.29;ReadPosRankSum=4.196;VQSLOD=1.5984;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:61.47:0,61,366	0/1:3,3:6:8.35:99,0,8	0/0:13,0:8:8.91:0,9,93	0/0:20,0:14:28.31:0,28,190	0/1:11,14:23:62.08:343,0,62	0/1:11,6:17:26.45:215,0,26	0/0:20,0:18:24.41:0,24,144	0/0:16,0:16:36.57:0,37,223	1/1:2,0:2:0.47:1,0,0	0/1:11,5:16:81.14:189,0,81	0/1:9,5:14:36.22:150,0,36	1/1:6,0:6:0.94:3,1,0	0/1:3,4:7:45.59:115,0,46	0/1:8,0:8:0.10:0,0,20	0/0:13,0:13:2.66:0,3,12	0/1:13,0:14:9.21:9,0,66	0/0:9,0:9:9.56:0,10,85	1/1:11,0:11:0.46:1,0,0	0/0:17,0:17:40.11:0,40,280	0/0:12,0:10:23.41:0,23,148	0/1:8,1:9:35.33:68,0,35	0/1:13,6:18:92.67:193,0,93	0/1:11,7:18:88.32:213,0,88	1/1:9,0:8:2.67:8,3,0	0/1:10,5:15:19.69:179,0,20	0/0:18,0:18:44.77:0,45,344	0/0:20,0:20:32.44:0,32,230	0/0:8,0:8:17.45:0,17,102
chr10	82840362	.	AAAAAG	A	2140.43	PASS	AB=0.986;AC=21;AF=0.375;AN=56;BaseQRankSum=10.454;DP=477;FS=2.671;HRun=0;HaplotypeScore=94.1516;InbreedingCoeff=-0.1662;MQ=50.13;MQ0=19;MQRankSum=-5.869;QD=8.02;ReadPosRankSum=4.720;VQSLOD=1.6153;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:88.67:0,89,1067	0/1:8,0:8:6.13:117,0,6	0/0:24,0:8:17.84:0,18,213	0/0:13,0:6:4.95:0,5,109	1/1:18,0:15:2.90:76,3,0	0/1:13,0:13:33.94:169,0,34	0/0:17,0:16:26.87:0,27,296	0/0:29,0:29:42.30:0,42,789	0/1:8,0:7:36.25:45,0,36	0/1:26,0:24:99:219,0,143	1/1:16,0:16:16.93:142,17,0	0/1:16,3:17:13.09:284,0,13	0/1:14,0:14:38.71:100,0,39	0/1:9,0:9:41.61:83,0,42	0/1:18,0:16:20.91:101,0,21	1/1:14,0:14:6.21:157,6,0	0/1:24,0:22:88.68:135,0,89	0/1:16,0:15:70.20:70,0,92	0/0:15,0:15:41.82:0,42,469	0/0:12,0:11:21.03:0,21,220	0/1:9,0:8:5.78:59,0,6	0/1:7,0:7:47.97:60,0,48	0/1:13,0:12:36.34:152,0,36	0/1:11,1:12:25.55:128,0,26	0/1:23,0:23:83.34:214,0,83	0/0:21,0:19:52.14:0,52,614	0/0:24,0:21:59.48:0,59,716	0/0:16,0:13:27.01:0,27,427
chr10	82840367	.	GAAAAA	G	4617	PASS	AB=0.609;AC=35;AF=0.625;AN=56;BaseQRankSum=2.987;DP=468;FS=13.950;HRun=17;HaplotypeScore=86.5669;InbreedingCoeff=0.8230;MQ=52.31;MQ0=17;MQRankSum=-5.492;QD=18.04;ReadPosRankSum=5.287;VQSLOD=0.2571;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:37:96.94:0,97,1410	1/1:1,5:6:15.04:226,15,0	0/0:26,0:9:18.48:0,18,242	0/0:14,0:7:16.29:0,16,215	1/1:4,14:15:19.89:194,20,0	1/1:4,10:14:23.96:361,24,0	0/0:9,0:15:24:0,24,353	0/0:21,0:30:60.69:0,61,916	1/1:3,5:7:5.93:90,6,0	1/1:10,17:26:28.65:523,29,0	1/1:2,11:14:22.71:300,23,0	1/1:8,10:16:29.47:410,29,0	1/1:5,8:13:11.68:179,12,0	1/1:3,5:8:11.91:180,12,0	1/1:4,7:11:14.92:192,15,0	1/1:2,16:18:24.02:356,24,0	1/1:9,11:19:5.16:304,5,0	0/1:5,9:13:29.57:166,0,30	0/0:16,0:17:45.06:0,45,641	0/0:10,0:10:15.87:0,16,192	1/1:1,9:9:8.97:126,9,0	1/1:4,4:8:8.85:135,9,0	1/1:3,9:12:1.91:252,2,0	1/1:3,8:11:14.22:223,14,0	1/1:8,10:22:29.73:400,30,0	0/0:9,0:19:48.08:0,48,668	0/0:19,0:21:48.02:0,48,785	0/0:9,0:13:27.06:0,27,442
chr10	82840522	.	C	CAACA	22883.48	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-8.840;DP=686;FS=9.721;HRun=0;HaplotypeScore=94.6083;InbreedingCoeff=0.9710;MQ=64.79;MQ0=7;MQRankSum=-1.648;QD=38.20;ReadPosRankSum=3.995;VQSLOD=4.7559;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,18:34:54.17:1191,54,0	1/1:2,7:9:18.06:395,18,0	0/0:21,0:16:21.07:0,21,333	0/0:36,0:30:42.09:0,42,554	1/1:6,15:22:42.14:969,42,0	1/1:8,19:28:48.16:1162,48,0	1/1:11,18:30:36.12:865,36,0	1/1:30,13:46:37.19:773,37,0	1/1:3,11:16:30.10:719,30,0	1/1:9,21:30:63.22:1466,63,0	1/1:6,21:27:57.15:1275,57,0	1/1:7,13:19:24.08:579,24,0	1/1:9,13:23:16.31:846,16,0	1/1:6,9:16:24.08:575,24,0	1/1:6,22:29:60.21:1447,60,0	1/1:6,23:28:57.20:1380,57,0	1/1:10,17:27:33.16:1212,33,0	1/1:14,17:32:42.14:987,42,0	1/1:8,10:20:41.54:706,42,0	1/1:6,13:19:36.12:832,36,0	1/1:10,7:17:15.05:363,15,0	1/1:5,15:20:45.15:999,45,0	1/1:5,14:19:42.57:965,43,0	1/1:13,18:32:48.16:1105,48,0	1/1:5,19:24:48.16:1162,48,0	0/0:25,0:25:48.15:0,48,729	1/1:5,16:24:38.30:910,38,0	0/0:4,0:4:9.03:0,9,146
chr10	82841536	.	A	AGTGT	10817.17	PASS	AB=0.760;AC=46;AF=0.821;AN=56;BaseQRankSum=-3.345;DP=645;FS=11.926;HRun=0;HaplotypeScore=160.9765;InbreedingCoeff=0.2639;MQ=60.25;MQ0=14;MQRankSum=-2.777;QD=18.59;ReadPosRankSum=3.132;VQSLOD=4.1878;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:34:0.01:0,0,0	1/1:6,6:15:27.09:605,27,0	0/0:31,0:10:6.02:0,6,75	0/0:32,0:17:23.38:0,23,250	1/1:6,8:13:6.49:144,6,0	1/1:6,11:22:12.51:287,13,0	1/1:10,0:21:9.03:156,9,0	1/1:31,0:30:17.26:254,17,0	1/1:8,8:19:20.92:450,21,0	1/1:18,13:33:54.19:882,54,0	0/1:7,2:9:39.73:153,0,40	1/1:18,7:28:42.94:707,43,0	0/1:10,9:22:29.89:348,0,30	1/1:9,11:26:23.99:412,24,0	0/1:13,7:23:13.94:338,0,14	1/1:9,8:20:26.99:494,27,0	0/1:12,12:27:19.31:834,0,19	1/1:8,3:13:21.01:357,21,0	1/1:18,0:19:15.04:215,15,0	1/1:4,1:8:5.76:123,6,0	1/1:14,12:29:14.89:309,15,0	1/1:9,5:14:15.52:355,16,0	1/1:10,3:15:18.02:260,18,0	1/1:23,12:41:7.66:1144,8,0	0/1:24,0:25:21.37:21,0,384	1/1:8,2:29:56.74:870,57,0	1/1:19,4:27:33.09:619,33,0	1/1:8,0:16:30.05:480,30,0
chr10	82842631	.	CA	C	4662.48	PASS	AB=0.923;AC=17;AF=0.304;AN=56;BaseQRankSum=11.352;DP=626;FS=5.011;HRun=10;HaplotypeScore=68.3824;InbreedingCoeff=0.9351;MQ=77.69;MQ0=0;MQRankSum=-0.246;QD=21.10;ReadPosRankSum=0.891;VQSLOD=5.9336;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:70.42:712,70,0	0/0:11,0:11:26.91:0,27,280	0/0:21,0:18:21.02:0,21,218	0/0:16,0:16:16.40:0,16,166	0/0:29,0:29:69.18:0,69,754	0/0:20,0:21:53.97:0,54,571	1/1:0,17:17:50.99:443,51,0	1/1:7,26:33:44.77:614,45,0	0/1:11,1:12:2:2,0,200	0/0:31,0:31:78.20:0,78,854	0/0:25,0:26:68.98:0,69,724	0/0:19,0:19:48.12:0,48,523	0/0:20,0:20:60.09:0,60,631	0/0:26,0:26:66.17:0,66,721	0/0:28,0:28:66.18:0,66,730	0/0:24,2:26:34.11:0,34,605	0/0:19,0:19:57.15:0,57,631	0/0:23,1:24:40.02:0,40,629	1/1:0,13:13:38.99:339,39,0	1/1:4,28:33:83:709,83,0	0/0:3,0:3:9.02:0,9,100	0/0:13,0:13:30.08:0,30,330	0/0:21,0:21:60.16:0,60,659	0/0:21,0:21:58.95:0,59,626	0/0:30,0:30:71.93:0,72,775	1/1:3,28:31:83.96:724,84,0	1/1:4,41:44:99:911,105,0	1/1:0,8:8:24:208,24,0
chr10	82843676	.	CATTATT	C	9511.84	PASS	AB=0.542;AC=15;AF=0.268;AN=56;BaseQRankSum=8.484;DP=589;FS=7.038;HRun=0;HaplotypeScore=162.4553;InbreedingCoeff=0.8873;MQ=64.04;MQ0=0;MQRankSum=-15.247;QD=52.26;ReadPosRankSum=0.477;VQSLOD=4.7539;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:51.18:1204,51,0	0/0:11,0:11:30.10:0,30,1070	0/0:12,0:12:33.11:0,33,1006	0/0:10,0:10:5.69:0,6,663	0/0:22,0:22:60.19:0,60,1977	0/0:21,0:21:60.21:0,60,2127	1/1:5,12:17:33.11:780,33,0	1/1:11,24:35:72.23:1610,72,0	0/0:25,0:25:69.24:0,69,2452	0/0:22,0:22:60.21:0,60,2032	0/0:26,0:26:78.25:0,78,2668	0/0:20,0:20:57.20:0,57,1994	0/0:21,0:21:60.21:0,60,2022	0/0:32,0:32:93.30:0,93,3159	0/0:30,0:30:84.29:0,84,2904	0/0:26,0:25:75.26:0,75,2673	0/0:27,0:27:72.25:0,72,2567	0/0:13,0:13:36.12:0,36,1283	1/1:5,16:21:48.15:1024,48,0	1/1:3,23:26:66.23:1542,66,0	0/0:15,0:15:42.14:0,42,1488	0/0:13,0:13:39.13:0,39,1289	0/0:27,0:27:78.25:0,78,2514	0/0:9,0:9:27.09:0,27,963	0/0:25,0:25:69.22:0,69,2318	0/1:4,22:26:37.78:1440,0,38	1/1:3,26:29:66.23:1559,66,0	1/1:1,5:6:15.05:354,15,0
chr10	82846156	.	AAC	A	18638.12	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=17.138;DP=698;FS=0.290;HRun=0;HaplotypeScore=108.5383;InbreedingCoeff=0.9985;MQ=83.83;MQ0=0;MQRankSum=-3.226;QD=43.45;ReadPosRankSum=8.663;VQSLOD=5.6378;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,2619	1/1:0,7:7:18.06:293,18,0	0/0:30,0:30:90.28:0,90,1762	0/0:16,0:16:45.12:0,45,804	1/1:0,23:23:57.19:929,57,0	1/1:0,24:24:66.23:1076,66,0	0/0:25,0:25:75.23:0,75,1431	0/0:33,0:33:99:0,99,1933	1/1:0,31:31:84.29:1370,84,0	1/1:0,26:26:75.26:1223,75,0	1/1:0,16:16:39.13:636,39,0	1/1:0,31:31:78.27:1269,78,0	1/1:0,26:26:66.23:1076,66,0	1/1:0,29:29:81.28:1321,81,0	1/1:0,40:40:99:1908,117,0	1/1:0,34:34:93.32:1517,93,0	1/1:0,21:21:54.18:881,54,0	1/1:0,14:14:42.14:685,42,0	0/0:23,0:23:69.24:0,69,1393	0/0:16,0:16:48.15:0,48,937	1/1:0,36:36:90.31:1468,90,0	1/1:0,22:22:60.20:978,60,0	1/1:0,18:18:42.14:685,42,0	1/1:0,14:14:39.13:636,39,0	1/1:0,17:17:42.14:685,42,0	0/0:43,0:43:99:0,129,2405	0/0:31,0:31:90.31:0,90,1788	0/0:8,0:8:24.08:0,24,488
chr10	82847324	.	TTTATCTTAA	T	21120.94	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=16.981;DP=663;FS=0.000;HRun=0;HaplotypeScore=212.1029;InbreedingCoeff=0.9763;MQ=78.46;MQ0=0;MQRankSum=-17.054;QD=50.29;ReadPosRankSum=3.600;VQSLOD=4.5071;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.25:0,72,3220	1/1:3,10:13:27.09:787,27,0	0/0:22,0:22:47.95:0,48,1760	0/0:20,0:20:48.16:0,48,1843	1/1:1,23:24:54.18:1149,54,0	1/1:4,22:26:54.18:1430,54,0	0/0:19,0:19:51.18:0,51,2236	0/0:42,0:42:99:0,105,4388	1/1:6,31:37:78.27:2269,78,0	1/1:5,27:32:81.28:2160,81,0	1/1:0,12:12:33.11:771,33,0	1/1:6,19:25:42.14:1176,42,0	1/1:3,21:24:54.19:1572,54,0	1/1:1,21:22:48.16:1398,48,0	1/1:9,30:39:72.25:2049,72,0	1/1:5,39:44:84.29:2446,84,0	1/1:8,16:24:24.04:584,24,0	1/1:3,8:11:6.02:175,6,0	0/0:26,0:26:66.22:0,66,2817	0/0:16,0:16:48.12:0,48,2080	1/1:6,12:18:12.04:301,12,0	1/1:3,13:16:36.12:906,36,0	1/1:3,15:18:30.57:827,31,0	1/1:7,10:17:15.05:389,15,0	1/1:6,12:18:30.10:731,30,0	0/0:35,1:36:20.99:0,21,4774	0/0:27,0:27:78.25:0,78,3439	0/0:10,0:10:30.10:0,30,1380
chr10	82847747	.	CT	C	3140.73	PASS	AB=0.950;AC=14;AF=0.250;AN=56;BaseQRankSum=-2.176;DP=469;FS=3.367;HRun=11;HaplotypeScore=60.5301;InbreedingCoeff=0.5419;MQ=72.56;MQ0=1;MQRankSum=4.356;QD=14.28;ReadPosRankSum=4.165;VQSLOD=4.1158;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,36:44:99:799,100,0	0/0:7,0:7:2.97:0,3,20	0/1:21,1:21:34.69:35,0,244	0/1:16,1:13:1.61:2,0,151	0/0:21,0:21:14.63:0,15,104	0/0:15,0:14:2.80:0,3,13	1/1:3,18:21:50.91:419,51,0	1/1:9,28:38:85.91:695,86,0	0/0:10,0:10:0:0,0,0	0/0:21,0:21:15.03:0,15,155	0/0:14,0:14:8.08:0,8,68	0/0:7,0:7:0:0,0,0	0/0:10,0:10:0:0,0,0	0/0:13,0:13:2.97:0,3,20	0/0:14,0:14:5.80:0,6,33	0/0:10,0:10:2.74:0,3,12	0/0:13,0:12:2.97:0,3,20	0/0:10,0:10:6.02:0,6,64	1/1:2,10:13:32:252,32,0	1/1:4,22:27:64.81:513,65,0	0/0:4,0:4:0:0,0,0	0/0:14,0:14:14.04:0,14,111	0/0:13,0:13:3.73:0,4,16	0/0:9,0:9:3.01:0,3,32	0/0:22,0:22:20.89:0,21,174	0/0:15,0:15:11.53:0,12,320	1/1:9,29:38:71.87:591,72,0	0/0:7,0:7:12.03:0,12,128
chr10	82848774	.	AC	A	1039.19	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.990;DP=544;FS=1.405;HRun=3;HaplotypeScore=52.6595;InbreedingCoeff=0.9964;MQ=81.83;MQ0=0;MQRankSum=-2.404;QD=28.87;ReadPosRankSum=1.282;VQSLOD=2.8576;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.23:0,81,1117	0/0:11,0:11:30.08:0,30,411	0/0:17,0:17:46.35:0,46,605	0/0:19,0:19:47.30:0,47,696	0/0:27,0:27:78.26:0,78,1120	0/0:16,0:15:42.12:0,42,584	0/0:30,0:30:90.29:0,90,1276	0/0:30,0:30:78.25:0,78,1094	0/0:13,0:13:39.13:0,39,558	0/0:15,0:15:42.13:0,42,580	0/0:16,0:16:45.15:0,45,641	0/0:18,0:18:54.13:0,54,752	0/0:24,0:24:72.22:0,72,1015	0/0:17,0:17:48.16:0,48,688	0/0:20,0:20:57.19:0,57,820	0/0:18,0:18:54.18:0,54,776	0/0:30,0:29:87.29:0,87,1249	0/0:14,0:14:39.13:0,39,561	0/0:22,0:22:57.17:0,57,799	0/0:10,0:10:30.10:0,30,432	0/0:31,0:31:93.30:0,93,1315	0/0:17,0:17:51.17:0,51,725	0/0:10,0:10:30.10:0,30,431	0/0:10,0:10:27.09:0,27,388	0/0:20,0:20:60.17:0,60,820	1/1:2,26:28:38.03:900,38,0	0/0:25,0:24:69.20:0,69,966	1/1:0,8:8:21.07:260,21,0
chr10	82849296	.	GTAATTATTTT	G	1768.55	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.017;DP=587;FS=1.835;HRun=0;HaplotypeScore=171.2704;InbreedingCoeff=0.9565;MQ=81.76;MQ0=0;MQRankSum=-7.528;QD=38.45;ReadPosRankSum=-1.192;VQSLOD=3.4651;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.33:0,96,5013	0/0:4,0:4:12.04:0,12,639	0/0:17,0:17:48.16:0,48,2222	0/0:18,0:18:51.17:0,51,2129	0/0:10,0:10:30.10:0,30,1517	0/0:14,0:14:42.14:0,42,2078	0/0:26,0:26:72.25:0,72,3721	0/0:21,0:21:63.22:0,63,3145	0/0:12,0:12:36.12:0,36,1862	0/0:20,0:20:60.21:0,60,3026	0/0:7,0:7:21.07:0,21,1038	0/0:37,0:37:99:0,111,5814	0/0:17,0:17:51.18:0,51,2679	0/0:31,0:31:93.32:0,93,4830	0/0:29,0:29:87.30:0,87,4515	0/0:30,0:30:90.31:0,90,4721	0/0:44,0:43:99:0,132,6622	0/0:32,0:32:96.33:0,96,4857	0/0:19,0:19:57.19:0,57,2648	0/0:6,0:6:18.02:0,18,796	1/1:12,34:46:59.78:1863,60,0	0/0:9,0:9:27.09:0,27,1294	0/0:10,0:10:30.10:0,30,1585	0/0:32,0:32:93.31:0,93,4512	0/0:14,0:14:42.14:0,42,1983	0/0:16,0:16:48.16:0,48,2442	0/0:23,0:22:69.24:0,69,3635	0/0:10,0:10:30.10:0,30,1405
chr10	82849795	.	C	CG	3815.49	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-10.824;DP=503;FS=3.925;HRun=2;HaplotypeScore=49.6291;InbreedingCoeff=0.9221;MQ=85.49;MQ0=0;MQRankSum=-0.383;QD=37.41;ReadPosRankSum=0.360;VQSLOD=3.9986;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,35:40:99:1468,102,0	0/0:5,0:5:15.05:0,15,185	0/0:17,0:17:48.10:0,48,556	0/0:14,0:14:33.10:0,33,391	0/0:4,0:4:12.04:0,12,149	0/0:22,0:22:60.18:0,60,731	1/1:0,15:15:36.12:518,36,0	1/1:2,12:14:36.12:518,36,0	0/0:15,0:15:45.14:0,45,555	0/0:11,0:11:33.10:0,33,406	0/0:1,0:1:3.01:0,3,37	0/0:36,0:36:99:0,102,1259	0/0:16,0:16:45.14:0,45,557	0/0:28,0:28:84.26:0,84,1040	0/0:16,0:16:48.14:0,48,582	0/0:24,0:24:69.22:0,69,855	0/0:44,0:44:99:0,123,1522	0/0:20,0:20:60.17:0,60,730	1/1:1,19:20:54.16:750,54,0	1/1:0,2:2:6.02:86,6,0	0/0:57,0:57:99:0,159,1969	0/0:8,0:8:24.08:0,24,297	0/0:8,0:8:24.08:0,24,297	0/0:24,0:24:69.22:0,69,855	0/0:5,0:5:12.04:0,12,149	0/0:22,0:22:63.20:0,63,780	1/1:0,11:11:33.11:475,33,0	0/0:4,0:4:12.04:0,12,149
chr10	82850132	.	TA	T	8452.49	PASS	AC=42;AF=0.913;AN=46;BaseQRankSum=-4.443;DP=256;FS=6.207;HRun=2;HaplotypeScore=32.4881;InbreedingCoeff=0.6001;MQ=84.22;MQ0=0;MQRankSum=-5.783;QD=35.22;ReadPosRankSum=3.037;VQSLOD=4.4311;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:45.15:584,45,0	./.	0/0:10,0:10:9.40:0,9,277	0/0:5,0:5:9.80:0,10,169	1/1:0,1:1:3.01:39,3,0	./.	1/1:1,26:27:69.22:896,69,0	1/1:1,2:3:6.02:78,6,0	1/1:0,2:2:6.02:78,6,0	1/1:0,7:7:21.07:273,21,0	./.	1/1:0,9:9:21.05:273,21,0	1/1:0,7:7:18.06:234,18,0	1/1:0,8:8:24.08:312,24,0	1/1:0,12:12:33.11:429,33,0	1/1:0,8:8:18.06:234,18,0	1/1:0,33:33:90.29:1168,90,0	1/1:0,14:14:33.11:429,33,0	1/1:0,7:7:21.07:273,21,0	./.	1/1:1,57:58:99:2064,160,0	1/1:0,2:2:6.02:78,6,0	1/1:0,1:1:3.01:39,3,0	1/1:0,16:16:48.16:623,48,0	1/1:0,2:2:6.02:78,6,0	1/1:1,5:6:15.05:195,15,0	1/1:0,2:2:6.02:78,6,0	./.
chr10	82852485	.	A	AT	3773	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.342;DP=550;FS=9.326;HRun=10;HaplotypeScore=55.0877;InbreedingCoeff=0.9427;MQ=69.85;MQ0=0;MQRankSum=-0.645;QD=23.88;ReadPosRankSum=-1.208;VQSLOD=3.6998;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:63.16:672,63,0	0/0:10,0:11:29:0,29,227	0/0:12,0:9:14.96:0,15,121	0/0:14,0:10:12.99:0,13,85	0/0:22,1:23:27.92:0,28,433	0/0:26,0:27:70.93:0,71,571	1/1:5,9:14:1.23:201,1,0	1/1:10,25:35:76.40:785,76,0	0/0:12,0:12:35.96:0,36,296	0/0:26,0:26:55.95:0,56,457	0/0:21,0:21:50.92:0,51,419	0/0:12,0:12:35.89:0,36,287	0/0:13,0:13:32.94:0,33,271	0/0:18,0:18:41.93:0,42,342	0/0:23,1:24:33.90:0,34,479	0/0:23,0:23:62.91:0,63,517	0/0:19,0:21:46.88:0,47,360	0/0:27,0:27:50.12:0,50,523	1/1:6,18:24:54.06:542,54,0	1/1:5,28:33:84.20:887,84,0	0/0:9,0:9:20.96:0,21,172	0/0:9,0:9:20.94:0,21,169	0/0:23,0:23:38.75:0,39,465	0/0:12,0:12:35.92:0,36,290	0/0:13,0:13:32.93:0,33,268	0/0:17,0:17:47.95:0,48,394	1/1:4,25:30:66:686,66,0	0/0:25,0:25:47.05:0,47,498
chr10	82853297	.	AGCC	A	51.70	PASS	AB=1.000;AC=6;AF=0.111;AN=54;BaseQRankSum=1.871;DP=357;FS=1.861;HRun=0;HaplotypeScore=64.2891;InbreedingCoeff=0.4082;MQ=60.76;MQ0=0;MQRankSum=-1.643;QD=2.58;ReadPosRankSum=-2.271;VQSLOD=1.1410;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:18.01:0,18,323	0/0:5,0:5:15.05:0,15,337	0/1:8,0:8:0.63:1,0,391	0/1:6,0:5:12.16:12,0,61	0/0:7,0:7:12.04:0,12,266	0/0:5,0:5:11.99:0,12,203	0/0:44,0:44:99:0,119,2273	0/0:4,0:4:3:0,3,26	0/0:6,0:6:8.96:0,9,204	0/0:4,0:4:5.99:0,6,89	0/0:1,0:1:3.01:0,3,68	0/0:21,0:21:51.18:0,51,1142	0/0:9,0:9:24.08:0,24,491	0/0:17,0:17:40.69:0,41,826	0/0:7,0:7:18.06:0,18,395	0/0:17,0:16:45.03:0,45,891	0/0:29,0:29:72.25:0,72,1589	0/0:29,0:29:72.25:0,72,1588	0/0:8,0:8:17.99:0,18,313	0/0:1,0:1:3.01:0,3,68	0/0:39,0:39:83.84:0,84,1385	0/0:2,0:2:0:0,0,0	./.	0/0:49,0:49:99:0,114,2506	0/0:8,0:8:8.95:0,9,109	1/1:1,4:5:8.98:96,9,0	0/0:12,0:12:33.03:0,33,635	1/1:0,1:1:3.01:50,3,0
chr10	82853334	.	ACAG	A	1840.38	PASS	AC=20;AF=0.667;AN=30;BaseQRankSum=-4.717;DP=410;FS=3.419;HRun=0;HaplotypeScore=84.1500;InbreedingCoeff=0.6041;MQ=57.41;MQ0=6;MQRankSum=1.769;QD=7.73;ReadPosRankSum=1.087;VQSLOD=2.7917;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:2.99:0,3,23	./.	./.	./.	./.	./.	0/0:47,0:47:13.63:0,14,131	0/0:15,0:14:0:0,0,0	1/1:2,7:9:8.86:119,9,0	./.	./.	1/1:4,13:17:5.88:79,6,0	1/1:6,10:17:12:135,12,0	1/1:7,16:23:15.05:193,15,0	1/1:4,6:10:1.14:139,1,0	1/1:8,10:17:24.08:318,24,0	1/1:13,18:31:27:335,27,0	1/1:11,12:23:18.06:237,18,0	./.	./.	1/1:37,0:36:3.01:39,3,0	0/0:5,0:5:0:0,0,0	./.	1/1:24,28:52:26.82:357,27,0	./.	./.	0/0:10,0:10:6.44:0,6,56	./.
chr10	82853376	.	GCAA	G	720.48	PASS	AB=1.000;AC=16;AF=0.308;AN=52;BaseQRankSum=10.570;DP=430;FS=4.060;HRun=0;HaplotypeScore=69.5590;InbreedingCoeff=-0.2229;MQ=55.40;MQ0=18;MQRankSum=1.021;QD=2.22;ReadPosRankSum=4.748;VQSLOD=0.9400;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:11:5.05:41,5,0	0/0:5,0:4:11.95:0,12,96	0/0:18,0:5:0.64:0,1,31	0/0:24,0:7:12.29:0,12,163	0/0:4,0:3:3.47:0,3,27	0/0:4,0:3:5.98:0,6,54	0/1:57,0:56:20.12:188,0,20	1/1:3,9:11:16.49:194,16,0	0/1:13,0:13:20.72:21,0,92	0/0:7,0:5:11.80:0,12,93	./.	0/0:25,0:24:5.20:0,5,253	0/1:17,0:17:18.35:18,0,133	0/1:31,0:31:10.96:11,0,277	0/1:18,0:18:6.77:7,0,252	0/1:17,0:17:65.27:65,0,152	0/1:30,0:29:57.02:57,0,175	0/1:23,0:23:36.96:37,0,202	0/1:9,0:8:22.82:23,0,36	./.	0/1:26,0:23:6.12:6,0,46	0/0:2,0:2:2.74:0,3,12	0/0:1,0:1:3:0,3,27	0/1:48,0:47:54.77:55,0,373	0/0:3,0:2:2.98:0,3,28	0/0:8,0:8:17.99:0,18,136	0/1:12,0:12:31.42:145,0,31	0/0:3,0:2:5.96:0,6,44
chr10	82853390	.	A	AGCA	871.41	PASS	AB=0.611;AC=9;AF=0.167;AN=54;BaseQRankSum=1.924;DP=467;FS=17.716;HRun=0;HaplotypeScore=83.8862;InbreedingCoeff=0.5552;MQ=61.85;MQ0=10;MQRankSum=-0.396;QD=7.92;ReadPosRankSum=-3.403;VQSLOD=-0.0692;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:15:6:89,6,0	0/0:8,0:7:12.04:0,12,157	0/0:25,0:11:6.02:0,6,27	0/0:32,0:17:9.13:0,9,229	0/0:6,0:6:3.01:0,3,43	0/0:2,0:2:6.02:0,6,86	0/1:20,34:54:31.52:54,0,32	1/1:12,0:12:27.08:404,27,0	0/0:13,0:13:27.04:0,27,345	0/0:9,0:8:6.01:0,6,70	0/0:4,0:4:3:0,3,28	0/0:26,0:25:39.13:0,39,553	0/0:15,0:15:27.08:0,27,368	0/0:30,0:30:54.13:0,54,726	0/0:17,0:17:45.10:0,45,607	0/0:20,0:20:45.04:0,45,608	0/0:30,0:30:51.13:0,51,697	0/0:22,0:22:45.12:0,45,622	1/1:11,0:10:8.63:81,9,0	./.	0/0:24,0:22:5.85:0,6,86	0/0:2,0:2:0:0,0,0	0/0:3,0:3:2.99:0,3,23	0/0:52,0:51:83.85:0,84,1099	0/0:4,0:4:3.90:0,4,45	0/0:8,0:8:11.69:0,12,134	1/1:16,0:16:24.74:390,25,0	0/0:5,0:4:6.02:0,6,81
chr10	82853716	.	CT	C	1598.93	PASS	AB=0.824;AC=36;AF=0.643;AN=56;BaseQRankSum=3.036;DP=454;FS=5.339;HRun=16;HaplotypeScore=60.4072;InbreedingCoeff=0.2148;MQ=85.43;MQ0=1;MQRankSum=-2.045;QD=4.08;ReadPosRankSum=3.386;VQSLOD=0.6653;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:38.87:0,39,312	1/1:2,5:7:8.42:53,8,0	0/1:40,0:19:1.57:2,0,66	0/1:32,0:19:3.51:4,0,43	1/1:1,8:10:16.65:95,17,0	1/1:9,8:18:3.33:124,3,0	0/1:16,2:19:1.04:1,0,220	0/1:25,4:30:27.16:27,0,220	1/1:11,4:14:24.48:137,24,0	1/1:3,2:6:7.84:42,8,0	1/1:2,8:11:22.53:131,23,0	0/1:13,6:20:11.41:100,0,11	1/1:10,6:17:16.60:95,17,0	0/1:2,6:8:13.37:42,0,13	1/1:11,5:16:2.24:112,2,0	1/1:4,9:14:28.48:167,28,0	0/1:15,12:27:3.90:202,0,4	1/1:6,8:16:30.24:167,30,0	0/1:18,2:20:3.37:3,0,172	0/0:5,0:6:5.12:0,5,63	1/1:8,8:18:2.39:112,2,0	1/1:3,2:5:2.88:18,3,0	0/0:4,0:4:2.22:0,2,44	1/1:2,3:6:7.90:42,8,0	0/1:6,1:8:15.38:15,0,17	0/0:19,0:20:29.11:0,29,269	0/1:19,8:27:76.31:76,0,235	0/0:16,0:16:26.87:0,27,310
chr10	82854025	.	GAT	G	889.45	PASS	AB=0.567;AC=3;AF=0.056;AN=54;BaseQRankSum=7.532;DP=259;FS=19.991;HRun=0;HaplotypeScore=33.1127;InbreedingCoeff=0.3594;MQ=77.47;MQ0=0;MQRankSum=1.324;QD=23.41;ReadPosRankSum=0.737;VQSLOD=1.6379;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:12.04:0,12,198	0/0:3,1:4:8.33:0,8,147	0/0:5,0:5:5.04:0,5,38	0/0:7,0:6:4.56:0,5,39	0/0:13,0:13:36.09:0,36,543	0/0:14,0:14:39.13:0,39,623	0/0:6,0:6:15.05:0,15,244	0/0:41,1:42:46.74:0,47,1264	0/0:2,0:2:6.02:0,6,99	0/0:14,1:15:4.60:0,5,592	0/0:10,0:10:30.10:0,30,489	0/0:3,0:3:6.02:0,6,99	0/0:5,0:5:15.05:0,15,248	0/0:6,0:6:18.06:0,18,288	0/0:4,0:4:12.04:0,12,198	0/0:8,0:8:21.07:0,21,347	0/0:12,0:12:30.10:0,30,492	0/0:17,0:17:48.13:0,48,729	0/0:10,0:10:18.06:0,18,296	0/0:9,0:9:27.09:0,27,446	0/0:4,0:4:6.02:0,6,99	./.	0/0:2,0:2:6.02:0,6,99	0/0:1,0:1:3.01:0,3,49	0/0:7,0:7:13.18:0,13,261	0/1:4,13:17:7.43:443,0,7	0/0:9,0:9:24.08:0,24,396	1/1:0,19:21:47.82:550,48,0
chr10	82854458	.	T	TCTTTGTTTGAAG	20256.51	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-2.826;DP=555;FS=3.386;HRun=0;HaplotypeScore=186.6971;InbreedingCoeff=0.9986;MQ=74.34;MQ0=1;MQRankSum=-14.541;QD=129.85;ReadPosRankSum=-2.962;VQSLOD=4.3025;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,6:22:54.18:2474,54,0	0/0:8,0:8:24.07:0,24,773	0/0:16,0:16:39.13:0,39,1218	0/0:9,0:9:27.05:0,27,893	0/0:20,0:20:54.19:0,54,1862	0/0:19,0:19:57.20:0,57,2126	1/1:15,7:22:60.21:3119,60,0	1/1:29,9:44:99:5635,117,0	0/0:17,0:17:48.15:0,48,1584	0/0:24,0:24:63.22:0,63,2259	0/0:14,0:14:39.12:0,39,1307	0/0:21,0:21:63.22:0,63,2156	0/0:24,0:24:69.22:0,69,2416	0/0:26,0:26:75.26:0,75,2431	0/0:25,0:25:66.23:0,66,2433	0/0:17,0:17:48.16:0,48,1686	0/0:31,0:31:93.32:0,93,3291	0/0:19,0:19:57.15:0,57,1963	1/1:8,6:16:42.12:1903,42,0	1/1:10,15:28:78.27:3963,78,0	0/0:16,0:16:48.15:0,48,1582	0/0:8,0:8:24.07:0,24,808	0/0:12,0:12:30.10:0,30,1105	0/0:16,0:16:48.15:0,48,1557	0/0:15,0:15:45.15:0,45,1560	0/0:32,0:32:96.33:0,96,3463	1/1:10,10:23:60.21:3163,60,0	0/0:10,0:10:27.09:0,27,1006
chr10	82856101	.	AC	A	4743.27	PASS	AB=0.927;AC=51;AF=0.911;AN=56;BaseQRankSum=3.995;DP=523;FS=3.430;HRun=1;HaplotypeScore=70.2525;InbreedingCoeff=-0.0577;MQ=50.96;MQ0=18;MQRankSum=-4.811;QD=9.07;ReadPosRankSum=1.719;VQSLOD=2.5780;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:33.76:190,34,0	1/1:11,0:10:21.40:105,21,0	0/1:50,7:13:31.91:32,0,49	0/1:42,3:11:26.05:26,0,45	1/1:30,0:29:61.98:350,62,0	1/1:20,0:20:34.96:187,35,0	1/1:10,0:10:17.57:116,18,0	1/1:35,0:32:70.34:471,70,0	1/1:12,0:12:28.22:174,28,0	1/1:22,0:22:54.81:330,55,0	1/1:26,0:25:52.13:305,52,0	1/1:14,0:14:25.04:135,25,0	1/1:8,0:8:20.15:117,20,0	1/1:15,0:15:27.96:149,28,0	1/1:13,0:12:25.45:131,25,0	1/1:16,0:15:29.17:130,29,0	1/1:15,0:14:32.64:185,33,0	1/1:10,0:10:15.52:70,16,0	1/1:19,0:19:49.02:329,49,0	1/1:26,0:26:45.27:270,45,0	1/1:4,0:3:6.03:25,6,0	0/1:4,0:4:14.90:34,0,15	1/1:16,0:16:43.12:281,43,0	1/1:5,0:5:11.66:67,12,0	1/1:15,0:15:30.61:163,31,0	0/1:26,3:28:99:116,0,333	1/1:20,0:20:43.66:248,44,0	0/1:8,1:8:8.84:9,0,100
chr10	82858838	.	A	AGT	21385.93	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.670;DP=1001;FS=3.433;HRun=0;HaplotypeScore=173.7557;InbreedingCoeff=0.6796;MQ=54.69;MQ0=14;MQRankSum=3.276;QD=23.58;ReadPosRankSum=4.849;VQSLOD=5.3402;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:43:18.73:181,19,0	1/1:1,8:9:18.06:288,18,0	0/0:38,0:13:14.14:0,14,119	0/0:54,0:25:21.43:0,21,265	1/1:18,7:25:3.13:509,3,0	1/1:4,14:18:48.12:718,48,0	1/1:19,2:43:20.06:187,20,0	1/1:44,0:49:62.73:498,63,0	1/1:15,26:40:92.96:1402,93,0	1/1:12,23:35:72.15:1070,72,0	1/1:6,13:20:0.14:489,0,0	1/1:17,28:44:27.55:1397,28,0	1/1:18,13:30:24.19:810,24,0	1/1:13,16:29:60.19:929,60,0	1/1:9,40:48:97.21:1531,97,0	1/1:8,36:42:87.30:1392,87,0	1/1:12,42:56:68.88:1632,69,0	1/1:12,25:36:54.22:1240,54,0	1/1:20,1:31:40.18:355,40,0	1/1:10,0:26:9.42:67,9,0	1/1:43,38:81:2.22:1894,2,0	1/1:10,11:21:45.13:688,45,0	1/1:7,13:19:6.16:586,6,0	1/1:15,37:51:99:1557,99,0	1/1:15,15:30:56.74:887,57,0	1/1:15,0:38:68.93:645,69,0	1/1:9,0:16:29.98:260,30,0	1/1:8,0:15:20.80:174,21,0
chr10	82858909	.	ATG	A	13623.66	PASS	AB=0.763;AC=48;AF=0.857;AN=56;BaseQRankSum=4.162;DP=979;FS=3.724;HRun=0;HaplotypeScore=199.6358;InbreedingCoeff=0.6935;MQ=57.40;MQ0=19;MQRankSum=3.105;QD=15.73;ReadPosRankSum=2.474;VQSLOD=4.7386;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:49:64.07:363,64,0	1/1:6,2:8:15.02:154,15,0	0/0:45,0:22:14.75:0,15,146	0/0:26,0:14:17.15:0,17,152	1/1:7,18:26:8.67:531,9,0	1/1:3,13:16:30.09:351,30,0	1/1:18,1:28:25.79:172,26,0	1/1:24,0:58:41.34:354,41,0	1/1:12,31:44:74.05:918,74,0	1/1:26,11:40:28.99:731,29,0	1/1:12,6:18:26.68:284,27,0	1/1:16,39:58:99:1255,111,0	1/1:13,26:38:45.39:620,45,0	1/1:6,25:34:24.56:698,25,0	1/1:19,22:39:78.15:874,78,0	1/1:18,23:41:84.03:928,84,0	1/1:22,15:39:57.21:750,57,0	1/1:18,10:28:39.03:469,39,0	1/1:17,0:26:28.37:140,28,0	1/1:11,1:22:36.24:181,36,0	1/1:26,59:86:99:1130,101,0	1/1:3,17:20:30.09:352,30,0	1/1:7,20:27:48.13:562,48,0	1/1:15,28:42:93.24:1066,93,0	0/1:14,23:39:31.46:562,0,31	0/0:42,0:41:67.32:0,67,1428	1/1:3,0:17:34.09:168,34,0	0/1:10,1:11:11.07:11,0,306
chr10	82859572	.	T	TA	3617.01	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-12.005;DP=792;FS=0.738;HRun=11;HaplotypeScore=82.1402;InbreedingCoeff=0.9581;MQ=68.80;MQ0=0;MQRankSum=-2.580;QD=19.66;ReadPosRankSum=-2.940;VQSLOD=3.3332;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,37:53:29.98:997,30,0	0/0:14,0:15:37.88:0,38,282	0/0:7,0:9:12.86:0,13,76	0/0:12,0:15:21.94:0,22,121	0/0:30,0:32:79.33:0,79,583	0/0:25,0:25:62.70:0,63,482	1/1:6,18:24:7.32:408,7,0	1/1:8,26:35:32.27:685,32,0	0/0:31,0:31:80.59:0,81,617	0/0:40,0:41:79.64:0,80,603	0/0:22,0:22:59.76:0,60,464	0/0:40,0:40:99:0,102,778	0/0:34,0:34:70:0,70,650	0/0:34,1:36:34.09:0,34,430	0/0:36,0:36:83.60:0,84,645	0/0:48,0:51:99:0,123,918	0/0:25,0:25:56.75:0,57,439	0/0:11,0:11:29.81:0,30,223	1/1:3,16:19:51.10:517,51,0	1/1:3,10:13:6.78:228,7,0	0/0:26,1:29:36.99:0,37,446	0/0:26,0:26:59.40:0,59,443	0/0:22,0:22:41.81:0,42,325	0/0:28,0:29:73.66:0,74,555	0/0:26,0:26:53.19:0,53,410	0/0:30,0:32:72.76:0,73,540	1/1:9,31:40:78.12:782,78,0	0/0:21,0:21:62.71:0,63,479
chr10	82860646	.	T	TA	4284.82	PASS	AB=0.948;AC=18;AF=0.321;AN=56;BaseQRankSum=-14.938;DP=547;FS=14.834;HRun=7;HaplotypeScore=97.8603;InbreedingCoeff=0.5537;MQ=71.41;MQ0=1;MQRankSum=0.572;QD=16.23;ReadPosRankSum=-2.306;VQSLOD=3.1231;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:63.19:761,63,0	0/0:7,0:7:11.27:0,11,58	0/0:26,0:22:16.66:0,17,317	0/0:9,0:8:17.77:0,18,156	0/1:27,1:28:3.87:4,0,199	0/0:21,0:21:50.30:0,50,257	1/1:0,18:18:48.15:580,48,0	1/1:2,17:19:51.15:606,51,0	0/1:14,1:15:8.25:8,0,86	0/1:23,1:24:5.68:6,0,183	0/0:19,0:19:40.71:0,41,208	0/0:20,0:20:43.43:0,43,211	0/0:18,0:18:36.14:0,36,183	0/0:11,0:11:20.55:0,21,113	0/0:21,0:21:44.25:0,44,211	0/1:19,1:20:7.60:8,0,174	0/0:27,0:27:66.19:0,66,344	0/0:17,0:17:23.61:0,24,125	1/1:2,19:21:51.16:615,51,0	1/1:3,28:31:78.19:918,78,0	0/0:9,0:9:15.26:0,15,75	0/0:14,0:14:21.64:0,22,104	0/0:27,1:28:58.15:0,58,303	0/0:16,0:16:26.95:0,27,136	0/0:19,0:19:36.19:0,36,160	0/1:27,1:28:39.66:40,0,183	1/1:4,21:25:60.18:725,60,0	0/1:9,1:10:14.53:15,0,68
chr10	82860815	.	TAA	T	5809.43	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.156;DP=629;FS=6.468;HRun=3;HaplotypeScore=76.5424;InbreedingCoeff=0.9945;MQ=75.51;MQ0=0;MQRankSum=-3.582;QD=42.10;ReadPosRankSum=-0.377;VQSLOD=3.9643;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,43:43:99:1930,126,0	0/0:5,0:5:15.05:0,15,272	0/0:17,0:17:48.16:0,48,868	0/0:25,1:25:66.23:0,66,1244	0/0:18,0:18:51.17:0,51,985	0/0:19,0:19:57.20:0,57,1101	1/1:0,29:29:81.28:1240,81,0	1/1:0,21:21:63.21:962,63,0	0/0:20,0:20:60.21:0,60,1159	0/0:21,0:21:63.22:0,63,1211	0/0:18,0:18:51.17:0,51,978	0/0:32,0:32:93.31:0,93,1766	0/0:29,0:29:87.30:0,87,1681	0/0:26,0:26:78.27:0,78,1491	0/0:28,0:28:81.26:0,81,1531	0/0:22,0:22:63.17:0,63,1149	0/0:39,0:39:99:0,114,2160	0/0:15,0:15:42.11:0,42,775	1/1:2,23:25:60.18:897,60,0	1/1:0,9:9:27.09:413,27,0	0/0:38,0:39:99:0,111,2086	0/0:19,0:19:51.17:0,51,984	0/0:12,0:12:33.11:0,33,638	0/0:31,0:31:87.30:0,87,1681	0/0:24,0:24:69.24:0,69,1319	0/0:25,0:25:75.25:0,75,1418	1/1:2,9:11:24.06:368,24,0	0/0:6,0:6:18.06:0,18,348
chr10	82862259	.	A	AGTGTGTGT	3810.77	PASS	AC=36;AF=0.720;AN=50;BaseQRankSum=-2.786;DP=619;FS=4.401;HRun=0;HaplotypeScore=179.2576;InbreedingCoeff=0.6104;MQ=60.48;MQ0=19;MQRankSum=-1.093;QD=9.27;ReadPosRankSum=-0.566;VQSLOD=2.0757;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:9.02:0,9,222	./.	./.	./.	1/1:16,0:15:5.84:115,6,0	1/1:18,3:21:2.77:121,3,0	0/0:21,0:22:12.04:0,12,265	1/1:28,0:27:4.19:13,4,0	1/1:18,1:21:10.01:348,10,0	1/1:23,0:23:22.39:416,22,0	1/1:11,0:11:2.96:42,3,0	1/1:22,0:22:8.03:68,8,0	1/1:14,0:13:14.13:275,14,0	1/1:15,4:21:11.87:380,12,0	1/1:24,1:24:2.96:121,3,0	1/1:14,0:20:6.02:152,6,0	1/1:28,0:28:15.94:444,16,0	1/1:18,0:26:2.99:24,3,0	0/0:26,0:23:9.02:0,9,134	0/0:11,0:13:8.70:0,9,141	1/1:49,0:46:11.79:282,12,0	1/1:8,5:13:3.01:121,3,0	1/1:15,0:15:9.03:282,9,0	1/1:27,0:26:14.49:398,14,0	1/1:25,0:25:6.34:209,6,0	0/0:13,0:20:6.02:0,6,112	0/0:15,0:15:5.96:0,6,129	0/0:15,0:15:3.01:0,3,56
chr10	82863636	.	G	GA	2347.58	PASS	AB=0.895;AC=11;AF=0.196;AN=56;BaseQRankSum=-5.150;DP=579;FS=7.597;HRun=4;HaplotypeScore=85.3290;InbreedingCoeff=0.9139;MQ=69.50;MQ0=9;MQRankSum=2.136;QD=17.39;ReadPosRankSum=-1.473;VQSLOD=2.6467;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:49.36:521,49,0	0/0:8,0:8:17.51:0,18,125	0/0:53,0:17:8.12:0,8,248	0/0:52,0:19:21.61:0,22,256	0/0:17,0:16:36.70:0,37,252	0/0:19,0:19:49.93:0,50,341	1/1:2,18:20:26.54:275,27,0	1/1:6,23:29:66.78:536,67,0	0/0:13,0:13:32.20:0,32,197	0/0:24,0:24:60.19:0,60,528	0/0:19,0:19:49.17:0,49,374	0/0:20,0:20:47.29:0,47,356	0/0:13,0:13:32.38:0,32,228	0/0:17,0:17:22.80:0,23,311	0/0:21,0:21:53.61:0,54,500	0/0:17,0:17:47.37:0,47,351	0/0:27,0:27:62.91:0,63,457	0/0:19,0:19:43.19:0,43,259	1/1:6,14:20:35.66:360,36,0	0/1:15,2:17:0.90:262,0,1	0/0:17,0:17:40.89:0,41,325	0/0:17,0:17:40.98:0,41,349	0/0:10,0:10:13.19:0,13,125	0/0:14,0:14:40.98:0,41,254	0/0:15,0:15:29.50:0,29,210	0/0:26,0:26:72.20:0,72,873	1/1:7,16:23:57.25:572,57,0	0/0:5,0:5:15.05:0,15,193
chr10	82863646	.	C	CA	9583.46	PASS	AB=0.986;AC=50;AF=0.893;AN=56;BaseQRankSum=-3.826;DP=641;FS=1.889;HRun=9;HaplotypeScore=77.6128;InbreedingCoeff=0.6418;MQ=71.29;MQ0=14;MQRankSum=-0.384;QD=15.76;ReadPosRankSum=2.746;VQSLOD=5.2761;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:75.01:733,75,0	1/1:1,6:7:15.03:157,15,0	0/1:74,1:24:3.32:3,0,144	0/1:67,1:21:3.18:3,0,93	1/1:3,21:23:53.90:513,54,0	1/1:3,20:23:36.10:396,36,0	1/1:20,0:20:37.57:390,38,0	1/1:20,0:21:25.07:406,25,0	1/1:1,14:15:30.08:330,30,0	1/1:5,19:24:54.08:558,54,0	1/1:2,19:21:47.84:480,48,0	1/1:4,15:19:27.07:297,27,0	1/1:1,10:11:24.06:264,24,0	1/1:4,11:16:35.92:369,36,0	1/1:7,11:19:0.95:219,1,0	1/1:2,15:17:39.11:429,39,0	1/1:2,21:26:62.55:624,63,0	1/1:1,20:21:48.09:515,48,0	1/1:17,1:18:13.05:330,13,0	1/1:6,17:24:53.15:472,53,0	1/1:4,12:16:20.92:212,21,0	1/1:5,12:19:32.70:303,33,0	1/1:1,9:10:20.99:229,21,0	1/1:1,15:16:39.11:429,39,0	1/1:2,17:19:1.21:238,1,0	0/0:26,0:27:61.96:0,62,518	1/1:29,0:29:54.76:685,55,0	0/0:6,0:6:17.98:0,18,152
chr10	82864456	.	T	TACACACACAC	8190.79	PASS	AB=1.000;AC=47;AF=0.940;AN=50;BaseQRankSum=-0.249;DP=598;FS=2.952;HRun=0;HaplotypeScore=206.9859;InbreedingCoeff=0.2071;MQ=56.57;MQ0=9;MQRankSum=-1.933;QD=15.57;ReadPosRankSum=-1.704;VQSLOD=3.9496;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:38:21.02:383,21,0	1/1:17,0:17:6.02:137,6,0	./.	./.	1/1:16,0:15:2.83:48,3,0	1/1:21,0:23:6.02:256,6,0	1/1:32,0:34:9.50:199,10,0	1/1:22,0:22:27.93:530,28,0	1/1:19,0:19:3.84:193,4,0	1/1:31,0:30:32.87:936,33,0	1/1:11,0:11:9.03:188,9,0	1/1:23,0:23:3.48:131,3,0	1/1:22,0:21:18.06:676,18,0	1/1:20,0:20:15.05:398,15,0	1/1:24,2:33:10.81:475,11,0	1/1:17,0:26:14.94:649,15,0	1/1:18,6:28:30.10:1251,30,0	1/1:10,0:11:9.92:351,10,0	1/1:18,0:17:13.08:356,13,0	1/1:14,4:22:3.01:148,3,0	./.	1/1:23,0:23:9.02:121,9,0	1/1:12,0:11:2.81:22,3,0	1/1:16,0:20:5.91:259,6,0	1/1:16,0:16:3.01:51,3,0	0/0:14,0:13:12.04:0,12,284	1/1:14,2:17:12.04:352,12,0	0/1:19,0:20:81.05:81,0,188
chr10	82864831	.	AC	A	5727.38	PASS	AB=0.846;AC=53;AF=0.981;AN=54;BaseQRankSum=-3.790;DP=310;FS=18.699;HRun=7;HaplotypeScore=42.2883;InbreedingCoeff=-0.0395;MQ=72.77;MQ0=0;MQRankSum=-1.762;QD=18.60;ReadPosRankSum=2.995;VQSLOD=3.2233;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,16:21:39.07:389,39,0	1/1:0,4:4:8.98:92,9,0	0/1:9,2:11:65.68:66,0,71	./.	1/1:0,7:7:15.03:153,15,0	1/1:0,8:8:18.04:183,18,0	1/1:2,24:26:32.19:486,32,0	1/1:1,9:10:24.05:244,24,0	1/1:3,10:13:23.94:237,24,0	1/1:2,10:12:27.05:268,27,0	1/1:2,1:3:3.01:31,3,0	1/1:1,9:10:14.84:137,15,0	1/1:2,8:10:20.78:195,21,0	1/1:2,17:19:41.99:427,42,0	1/1:1,8:9:6:61,6,0	1/1:3,7:10:20.98:200,21,0	1/1:3,17:20:21.52:215,22,0	1/1:1,14:15:17.12:208,17,0	1/1:1,5:6:15.03:152,15,0	1/1:3,2:5:6.01:61,6,0	1/1:4,16:20:39.56:398,40,0	1/1:3,8:11:21.04:213,21,0	1/1:3,8:11:18.04:183,18,0	1/1:2,9:11:30.54:285,31,0	1/1:2,8:10:24.05:243,24,0	1/1:2,7:9:21.03:207,21,0	1/1:2,8:10:24.05:242,24,0	1/1:0,7:7:15.03:153,15,0
chr10	82865283	.	TC	T	715.58	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-6.127;DP=359;FS=6.217;HRun=3;HaplotypeScore=62.2286;InbreedingCoeff=0.8861;MQ=45.54;MQ0=22;MQRankSum=-5.032;QD=7.38;ReadPosRankSum=-0.726;VQSLOD=0.1453;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:23.71:168,24,0	0/0:8,0:7:20.87:0,21,176	0/1:17,0:2:0:0,0,0	0/0:19,0:4:9.01:0,9,84	0/0:21,0:21:38.48:0,38,317	0/0:11,0:10:14.92:0,15,124	1/1:17,1:16:34.43:223,34,0	1/1:17,0:11:9.24:113,9,0	0/0:15,0:15:30.34:0,30,235	0/0:19,0:15:35.67:0,36,313	0/0:11,0:11:20.92:0,21,177	0/0:14,0:14:26.01:0,26,205	0/0:15,0:14:20.81:0,21,161	0/0:6,0:6:14.97:0,15,121	0/0:13,0:13:26.93:0,27,220	0/0:15,0:12:17.92:0,18,142	0/0:12,0:10:20.36:0,20,179	0/0:10,0:9:20.92:0,21,173	1/1:8,1:6:11.92:87,12,0	1/1:12,1:11:27.71:187,28,0	0/0:10,0:10:17.87:0,18,133	0/0:8,0:7:8.99:0,9,75	0/0:8,0:7:14.97:0,15,122	0/0:11,0:11:23.60:0,24,198	0/0:10,0:10:6:0,6,52	0/0:16,0:15:39.83:0,40,349	1/1:8,2:10:14.92:116,15,0	0/0:10,0:9:16.25:0,16,146
chr10	82865305	.	A	AG	915.64	PASS	AB=0.974;AC=10;AF=0.179;AN=56;BaseQRankSum=6.800;DP=537;FS=14.965;HRun=0;HaplotypeScore=81.3048;InbreedingCoeff=0.5983;MQ=47.67;MQ0=25;MQRankSum=-0.484;QD=7.27;ReadPosRankSum=1.941;VQSLOD=2.1680;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,1:17:19.63:197,0,20	0/0:4,0:4:8.34:0,8,54	0/0:22,0:4:5.74:0,6,31	0/0:37,0:10:15.50:0,16,126	0/0:25,0:25:58.92:0,59,382	0/0:18,0:17:32.70:0,33,204	1/1:17,0:15:7.86:162,8,0	0/1:27,0:22:44.62:45,0,71	0/0:17,0:17:39.39:0,39,232	0/0:27,0:25:64.51:0,65,437	0/0:21,0:20:46.76:0,47,296	0/0:12,0:12:28.30:0,28,194	0/0:15,0:14:27.79:0,28,173	0/0:12,0:12:32.82:0,33,258	0/0:17,0:17:45.39:0,45,287	0/0:19,0:16:43.59:0,44,276	0/0:24,0:23:53.52:0,54,359	0/0:19,0:16:35.58:0,36,249	1/1:14,0:11:0.07:113,0,0	1/1:22,2:23:30.13:294,30,0	0/0:4,0:4:10.16:0,10,64	0/0:11,0:10:16.09:0,16,103	0/0:24,0:24:49.45:0,49,329	0/0:14,0:14:26.57:0,27,165	0/0:30,0:30:74.41:0,74,563	0/0:30,0:30:79.26:0,79,560	1/1:25,1:25:8.92:254,9,0	0/0:9,0:8:19.32:0,19,121
chr10	82865318	.	G	GA	2334.76	PASS	AB=0.810;AC=12;AF=0.214;AN=56;BaseQRankSum=6.412;DP=537;FS=3.040;HRun=8;HaplotypeScore=73.9183;InbreedingCoeff=0.7905;MQ=56.16;MQ0=21;MQRankSum=-3.398;QD=14.97;ReadPosRankSum=-0.877;VQSLOD=3.7055;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,12:16:27.08:311,27,0	0/0:5,0:5:5.69:0,6,101	0/1:27,1:8:17.61:18,0,54	0/0:48,0:15:12.30:0,12,92	0/0:21,0:21:53.66:0,54,489	0/0:16,0:15:23.68:0,24,219	1/1:3,14:17:36.09:415,36,0	1/1:10,14:21:8.57:328,9,0	0/0:19,0:19:28.67:0,29,270	0/0:24,0:24:35.39:0,35,352	0/0:20,0:19:36.01:0,36,329	0/0:14,0:14:32.92:0,33,290	0/0:14,0:13:13.70:0,14,231	0/0:11,0:11:20.71:0,21,192	0/0:20,0:20:43.41:0,43,388	0/0:16,0:15:23.44:0,23,240	0/0:18,0:17:44.86:0,45,411	0/0:15,0:13:33.02:0,33,301	0/1:8,9:14:0.39:249,0,0	1/1:6,17:23:48.14:554,48,0	0/0:5,0:5:12.01:0,12,109	0/0:9,0:8:15:0,15,137	0/0:19,0:19:41.34:0,41,380	0/0:14,0:14:32.80:0,33,301	0/0:31,0:31:64.81:0,65,602	0/0:29,0:29:63.67:0,64,568	1/1:9,21:29:56.95:637,57,0	0/0:11,0:10:17.85:0,18,165
chr10	82865413	.	AG	A	2562.21	PASS	AB=0.780;AC=27;AF=0.500;AN=54;BaseQRankSum=0.099;DP=319;FS=3.195;HRun=1;HaplotypeScore=89.2260;InbreedingCoeff=-0.9001;MQ=42.80;MQ0=16;MQRankSum=-1.649;QD=8.60;ReadPosRankSum=-2.455;VQSLOD=0.2361;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,4:13:62.25:87,0,62	0/1:1,2:3:34.34:67,0,34	0/0:6,0:1:3:0,3,29	./.	0/1:15,0:15:19.03:19,0,156	0/1:7,8:14:99:275,0,160	0/1:3,5:8:38.26:111,0,38	0/1:7,3:6:27.20:27,0,63	0/1:3,7:10:68.22:68,0,103	0/1:15,0:14:99:183,0,171	0/1:14,1:14:99:102,0,378	0/1:5,3:8:61.74:62,0,166	0/1:13,2:11:54.09:54,0,263	0/1:5,0:4:24.01:24,0,121	0/1:6,6:11:99:210,0,131	0/1:11,2:11:99:146,0,170	0/1:11,1:9:99:128,0,106	0/1:8,5:12:92.50:92,0,188	0/1:4,3:7:47.79:48,0,76	0/1:8,7:14:99:119,0,105	0/1:5,3:7:84.24:122,0,84	0/1:4,3:6:68.51:69,0,93	1/1:14,0:13:1.25:3,1,0	0/1:5,2:6:26.90:27,0,74	0/1:6,4:9:99:158,0,104	0/1:22,0:21:99:334,0,303	0/1:4,7:11:53.19:129,0,53	0/1:13,2:14:41.59:42,0,357
chr10	82865422	.	GAA	G	2135.84	PASS	AB=0.815;AC=20;AF=0.357;AN=56;BaseQRankSum=0.254;DP=330;FS=8.968;HRun=3;HaplotypeScore=98.6949;InbreedingCoeff=-0.6085;MQ=43.35;MQ0=18;MQRankSum=-3.585;QD=8.48;ReadPosRankSum=2.568;VQSLOD=-0.0365;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:9,4:13:99:136,0,294	0/0:3,0:3:9.03:0,9,131	0/0:10,0:2:5.98:0,6,56	0/0:9,0:2:3.01:0,3,35	0/0:18,0:18:18.05:0,18,240	0/1:15,1:15:53.79:54,0,376	0/1:6,1:7:24.68:25,0,226	0/0:10,0:6:15.04:0,15,199	0/1:9,1:10:72.28:72,0,110	0/1:17,1:17:99:177,0,345	0/1:6,8:13:99:170,0,165	0/1:6,1:7:75.01:75,0,106	0/1:6,7:9:90.31:204,0,90	0/1:3,1:3:32.40:81,0,32	0/1:9,2:10:99:108,0,211	0/1:8,4:10:67.63:68,0,224	0/1:13,3:13:99:103,0,296	0/1:7,4:9:67.72:164,0,68	0/1:8,3:11:99:103,0,293	0/1:17,3:19:99:101,0,436	0/1:7,2:9:65.68:66,0,236	0/0:3,1:3:9.03:0,9,125	0/0:15,0:14:3.01:0,3,43	0/0:8,1:8:12.47:0,12,149	0/1:6,4:9:99:152,0,169	0/1:25,0:24:99:185,0,523	0/1:10,2:12:57.27:57,0,318	0/1:7,6:12:99:191,0,260
chr10	82867622	.	A	AT	4171.10	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-5.116;DP=548;FS=32.642;HRun=10;HaplotypeScore=58.0394;InbreedingCoeff=0.9651;MQ=77.26;MQ0=0;MQRankSum=-0.789;QD=24.68;ReadPosRankSum=-2.295;VQSLOD=1.6591;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:29:72.12:754,72,0	0/0:12,0:12:29.96:0,30,246	0/0:16,0:16:6.71:0,7,197	0/0:11,0:11:17.16:0,17,164	0/0:29,1:30:27.15:0,27,412	0/0:17,0:17:44.95:0,45,369	1/1:4,19:24:50.96:526,51,0	1/1:4,28:32:84.15:862,84,0	0/0:18,0:18:41.85:0,42,335	0/0:22,0:22:62.13:0,62,496	0/0:15,1:16:15.95:0,16,335	0/0:17,0:17:41.94:0,42,345	0/0:14,0:14:41.95:0,42,344	0/0:16,0:16:47.95:0,48,394	0/0:17,0:17:47.95:0,48,394	0/0:15,0:16:43.99:0,44,351	0/0:28,0:28:74.88:0,75,611	0/0:14,0:14:38.91:0,39,315	1/1:7,21:28:69.09:711,69,0	1/1:3,27:30:72.06:729,72,0	0/0:13,0:13:32.95:0,33,271	0/0:18,0:18:35.86:0,36,295	0/0:27,0:28:73.90:0,74,589	0/0:16,0:16:47.95:0,48,394	0/0:19,0:19:44.90:0,45,366	0/0:18,0:18:38.92:0,39,316	1/1:4,21:26:56.80:590,57,0	0/0:3,0:3:8.99:0,9,74
chr10	82868194	.	ATGTGTGTGTGTGTG	A	2931.02	PASS	AB=0.819;AC=20;AF=0.417;AN=48;BaseQRankSum=3.785;DP=813;FS=14.711;HRun=0;HaplotypeScore=271.0304;InbreedingCoeff=0.0480;MQ=64.93;MQ0=10;MQRankSum=0.148;QD=6.12;ReadPosRankSum=1.885;VQSLOD=1.0941;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:50.60:51,0,133	1/1:2,5:8:6.02:177,6,0	0/0:26,0:22:17.97:0,18,207	0/0:34,0:32:20.48:0,20,198	./.	0/0:11,10:21:2.60:0,3,10	0/1:23,0:33:19.02:35,0,19	0/0:35,0:29:10.58:0,11,93	0/1:23,1:22:45.21:312,0,45	1/1:32,17:47:13.12:797,13,0	./.	0/1:18,24:43:19.42:74,0,19	./.	0/1:16,15:31:3:124,0,3	1/1:21,12:37:3.01:67,3,0	1/1:13,15:29:20.75:547,21,0	1/1:11,12:23:4.71:138,5,0	0/1:26,1:27:5.37:395,0,5	0/1:16,0:17:12.71:104,0,13	0/0:8,1:18:3:0,3,25	0/1:53,29:79:32:33,0,32	0/0:8,13:20:2.50:0,2,9	./.	0/0:22,26:47:1.91:0,2,12	0/1:12,6:19:2.80:53,0,3	0/0:39,0:39:46.20:0,46,719	0/1:19,0:23:82.57:179,0,83	0/0:12,0:16:30.09:0,30,568
chr10	82868428	.	GTC	G	1406.17	PASS	AB=0.993;AC=23;AF=0.411;AN=56;BaseQRankSum=9.333;DP=1059;FS=8.497;HRun=0;HaplotypeScore=274.0149;InbreedingCoeff=0.0539;MQ=37.64;MQ0=72;MQRankSum=2.423;QD=2.44;ReadPosRankSum=4.844;VQSLOD=1.0412;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:69,0:59:75.16:0,75,1297	0/0:14,0:14:2.59:0,3,10	0/0:30,0:4:11.96:0,12,136	0/1:33,0:4:6.94:7,0,42	0/1:19,0:18:6.98:50,0,7	0/1:20,1:20:22.06:22,0,22	0/0:54,0:45:58.99:0,59,943	0/0:93,0:51:99:0,113,2030	1/1:30,2:29:14.33:81,14,0	0/1:43,0:41:99:274,0,177	0/1:13,0:11:1.25:1,0,61	0/1:47,1:45:25.81:203,0,26	1/1:28,0:23:36.32:220,36,0	0/1:26,0:22:21.61:22,0,34	1/1:44,0:41:2.57:97,3,0	1/1:26,0:26:17.47:84,17,0	1/1:19,0:13:10.27:58,10,0	0/1:21,0:20:13.79:168,0,14	0/0:62,0:30:82.98:0,83,1168	0/0:61,0:59:92.62:0,93,1547	0/1:73,0:58:95.37:95,0,192	0/1:28,0:26:54.23:54,0,78	0/1:23,0:21:1.51:74,0,2	0/1:48,0:41:31.66:35,0,32	0/1:30,1:31:33.10:35,0,33	0/0:48,0:43:72.40:0,72,1553	0/0:28,0:25:45.38:0,45,775	0/0:23,1:23:5.44:0,5,916
chr10	82868430	.	CTG	C	5016.56	PASS	AB=0.592;AC=34;AF=0.607;AN=56;BaseQRankSum=6.338;DP=1052;FS=16.688;HRun=0;HaplotypeScore=265.3627;InbreedingCoeff=0.8259;MQ=37.52;MQ0=71;MQRankSum=1.416;QD=9.06;ReadPosRankSum=1.215;VQSLOD=2.6923;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:68,0:59:66.17:0,66,998	0/1:2,12:14:0:0,0,0	0/0:28,0:4:8.86:0,9,94	0/0:29,0:4:6.22:0,6,49	1/1:10,9:18:14.98:190,15,0	1/1:9,13:21:8.88:109,9,0	0/0:55,0:44:31.45:0,31,751	0/0:92,0:50:99:0,102,1464	1/1:15,17:29:15.04:191,15,0	1/1:28,15:42:30.52:767,31,0	1/1:7,5:10:2.87:38,3,0	1/1:21,27:45:47.47:509,47,0	1/1:13,14:22:47.88:536,48,0	1/1:16,11:23:17.40:159,17,0	1/1:21,23:41:26.86:336,27,0	1/1:10,16:26:20.88:241,21,0	1/1:15,5:14:20.70:208,21,0	0/1:9,11:19:36.13:318,0,36	0/0:63,0:30:63.11:0,63,994	0/0:60,0:59:78.10:0,78,1215	1/1:53,17:55:37.69:519,38,0	1/1:16,11:25:10.11:241,10,0	1/1:10,12:20:23.93:293,24,0	1/1:30,19:42:17.98:196,18,0	1/1:6,24:31:14.57:165,15,0	0/0:49,1:45:68.49:0,68,1489	0/0:28,0:25:39.12:0,39,603	0/0:24,0:23:37.60:0,38,837
chr10	82868470	.	C	CTG	1284.92	PASS	AB=0.973;AC=24;AF=0.500;AN=48;BaseQRankSum=5.090;DP=904;FS=7.783;HRun=0;HaplotypeScore=275.4741;InbreedingCoeff=-0.3368;MQ=31.14;MQ0=89;MQRankSum=-2.664;QD=1.76;ReadPosRankSum=-2.087;VQSLOD=1.1287;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:60,8:56:17.77:154,0,18	1/1:12,0:12:10.67:62,11,0	./.	./.	1/1:20,0:18:2.37:8,2,0	1/1:26,0:23:5.56:30,6,0	0/1:43,7:37:14.75:148,0,15	0/1:52,0:12:23.62:51,0,24	0/1:39,0:38:34.23:34,0,55	0/1:53,1:44:99:213,0,184	./.	0/0:39,0:36:8.21:0,8,149	0/1:41,0:37:30.10:30,0,81	0/1:22,0:20:27.65:28,0,28	0/1:44,0:40:0:0,0,0	0/1:31,0:30:5.84:6,0,20	0/1:20,0:12:26.26:26,0,27	0/1:18,0:17:10.63:11,0,156	0/1:38,1:25:46.83:211,0,47	0/1:51,9:57:99:140,0,147	0/0:41,2:32:9.21:0,9,87	./.	0/1:19,0:12:16.11:16,0,18	0/1:35,1:30:0:0,0,0	0/1:23,0:20:0.02:1,0,0	0/0:54,0:44:99:0,110,1347	0/1:29,2:28:92.61:249,0,93	0/1:21,0:20:0.13:0,0,350
chr10	82868472	.	GTGTGTGTGTC	G	4006.90	PASS	AB=0.957;AC=34;AF=0.708;AN=48;BaseQRankSum=1.127;DP=905;FS=22.551;HRun=0;HaplotypeScore=299.9154;InbreedingCoeff=0.0972;MQ=30.88;MQ0=90;MQRankSum=-4.309;QD=5.82;ReadPosRankSum=-1.409;VQSLOD=0.9739;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:64,3:54:6.13:72,0,6	1/1:6,6:12:12.01:293,12,0	./.	./.	1/1:8,12:18:2.88:15,3,0	1/1:17,9:23:6.02:134,6,0	0/1:51,1:39:21.16:90,0,21	1/1:53,0:12:15.05:218,15,0	1/1:18,21:38:8.44:257,8,0	1/1:26,26:42:56.30:1143,56,0	./.	1/1:23,17:36:7.90:132,8,0	1/1:20,21:36:16.78:289,17,0	1/1:13,8:19:0.03:0,0,0	0/0:17,27:40:0:0,0,0	1/1:20,12:31:6.90:116,7,0	1/1:17,2:11:6.02:157,6,0	0/1:16,2:17:72.38:153,0,72	1/1:29,11:24:18.09:333,18,0	0/1:60,2:59:34.88:117,0,35	0/0:45,2:32:0.47:0,0,1	./.	1/1:19,2:14:6.02:161,6,0	0/0:36,1:30:0:0,0,0	1/1:14,8:19:3.48:35,3,0	0/0:53,0:43:20.85:0,21,1598	0/1:28,2:27:14.30:278,0,14	0/1:20,0:19:11.31:11,0,410
chr10	82868480	.	G	GTA	382.87	PASS	AB=0.986;AC=24;AF=0.500;AN=48;BaseQRankSum=6.786;DP=886;FS=2.906;HRun=0;HaplotypeScore=248.6517;InbreedingCoeff=-0.2565;MQ=30.33;MQ0=84;MQRankSum=-3.744;QD=0.55;ReadPosRankSum=4.007;VQSLOD=2.2325;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:64,0:52:29.33:29,0,58	1/1:10,0:10:5.76:15,6,0	./.	./.	1/1:18,0:16:2.37:8,2,0	1/1:24,0:20:4.15:14,4,0	0/1:46,0:34:38.73:86,0,39	0/1:61,0:22:13.43:13,0,127	0/1:36,1:37:4.65:5,0,62	0/1:53,0:42:57.93:58,0,234	./.	0/0:39,0:35:12.40:0,12,172	0/1:39,0:34:13.52:14,0,92	0/1:19,2:19:29.58:46,0,30	0/1:39,0:37:0.04:0,0,0	0/1:32,0:31:5.63:6,0,20	0/1:20,0:12:12.08:12,0,31	0/0:16,0:15:12.84:0,13,205	0/1:37,0:20:82.88:83,0,90	0/1:61,0:58:21.72:22,0,265	0/0:41,5:30:9.21:0,9,92	./.	0/1:21,0:15:0.08:0,0,20	1/1:34,1:29:1.25:3,1,0	0/1:20,0:18:0.03:1,0,0	0/0:56,0:45:99:0,116,1642	0/1:27,0:25:88.07:88,0,136	0/1:21,1:21:15.03:15,0,467
chr10	82868482	.	C	CTG	2948.87	PASS	AB=0.918;AC=36;AF=0.720;AN=50;BaseQRankSum=3.943;DP=888;FS=17.777;HRun=0;HaplotypeScore=231.2359;InbreedingCoeff=-0.1059;MQ=29.76;MQ0=84;MQRankSum=-2.112;QD=3.68;ReadPosRankSum=0.832;VQSLOD=1.0636;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:58,6:50:0.61:69,1,0	1/1:9,1:10:12.01:127,12,0	0/0:2,0:1:2.97:0,3,20	./.	1/1:18,1:17:3.01:51,3,0	1/1:19,5:20:6.02:84,6,0	0/1:40,7:35:25.96:130,0,26	0/1:55,2:21:99:319,0,129	1/1:37,3:38:9.50:115,9,0	1/1:47,4:40:51.41:700,51,0	./.	1/1:35,4:35:7.79:79,8,0	1/1:37,2:35:16.61:216,17,0	1/1:18,5:21:5.87:36,6,0	0/1:38,3:39:0:0,0,0	1/1:28,5:32:6.01:74,6,0	1/1:14,4:13:9.03:123,9,0	0/1:14,1:14:56.05:141,0,56	0/1:36,0:19:11.11:258,0,11	0/1:56,5:58:99:104,0,115	0/0:44,4:31:0.20:0,0,1	./.	1/1:17,3:14:6.02:71,6,0	0/1:22,13:30:0:0,0,0	1/1:18,4:19:4.25:38,4,0	0/1:55,0:45:34.11:34,0,821	0/1:22,5:25:26.79:237,0,27	0/1:21,0:20:74.18:74,0,147
chr10	82868492	.	C	CTG	196.62	PASS	AB=0.994;AC=21;AF=0.389;AN=54;BaseQRankSum=6.783;DP=860;FS=3.419;HRun=0;HaplotypeScore=204.7108;InbreedingCoeff=0.1512;MQ=29.65;MQ0=88;MQRankSum=-4.651;QD=0.52;ReadPosRankSum=4.416;VQSLOD=2.5780;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:40:9.54:0,10,133	0/1:9,0:9:13.81:38,0,14	0/0:14,0:2:6.02:0,6,76	./.	1/1:24,0:21:1.25:3,1,0	0/1:21,0:18:14.96:15,0,22	0/0:49,0:36:10.26:0,10,214	0/0:62,0:29:27.25:0,27,421	1/1:32,0:30:5.64:46,6,0	0/1:45,0:35:86.11:95,0,86	0/1:18,0:14:0:0,0,0	0/1:31,0:29:0.55:1,0,11	1/1:38,1:34:7.61:30,8,0	0/0:21,0:19:5.74:0,6,47	0/0:38,0:37:2.84:0,3,17	1/1:32,0:31:6.14:29,6,0	0/1:14,1:13:21.44:21,0,85	0/1:11,0:10:1.07:1,0,44	0/1:33,0:18:26.39:26,0,200	0/0:54,0:50:37.29:0,37,439	0/0:44,0:27:0.20:0,0,1	0/0:15,0:13:3.01:0,3,31	1/1:20,0:14:3.43:20,3,0	0/0:27,8:32:2.92:0,3,38	1/1:24,0:20:1.25:3,1,0	0/0:57,0:47:82.14:0,82,953	0/1:23,0:21:11.72:12,0,188	0/0:17,0:16:27.48:0,27,259
chr10	82868558	.	GTGTGTGTGTGTGTC	G	9146.93	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=-2.201;DP=928;FS=5.857;HRun=0;HaplotypeScore=276.8765;InbreedingCoeff=-0.1298;MQ=41.93;MQ0=34;MQRankSum=2.285;QD=10.93;ReadPosRankSum=0.258;VQSLOD=3.1101;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:47,0:43:89.56:90,0,170	0/1:12,0:12:24.64:361,0,25	0/0:39,0:8:3.01:0,3,69	0/1:48,0:17:0.92:1,0,131	1/1:23,0:22:15.05:320,15,0	0/1:35,0:35:12.54:478,0,13	0/1:49,0:43:99:109,0,267	0/1:59,0:44:99:190,0,135	1/1:26,0:24:3.21:195,3,0	1/1:25,0:22:9.38:941,9,0	1/1:20,0:19:17.89:282,18,0	0/1:26,0:22:30.46:348,0,30	1/1:41,0:41:13.12:813,13,0	1/1:27,0:25:31.35:474,31,0	0/1:38,0:37:9.55:678,0,10	1/1:38,0:39:33.48:763,33,0	0/1:30,0:23:23.53:352,0,24	1/1:14,0:14:20.98:354,21,0	0/1:29,0:18:30.19:30,0,138	0/1:33,0:31:47.34:47,0,49	1/1:57,0:46:28.75:566,29,0	0/1:26,0:25:15.45:553,0,15	1/1:6,26:32:2.91:74,3,0	0/1:49,0:47:15.28:489,0,15	1/1:22,0:22:4.50:556,5,0	0/0:43,0:39:96.21:0,96,3451	0/1:25,0:23:83.27:83,0,148	0/0:9,0:8:15.05:0,15,834
chr10	82869779	.	CTG	C	1984.02	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=0.885;DP=647;FS=25.018;HRun=0;HaplotypeScore=99.1078;InbreedingCoeff=0.9402;MQ=65.88;MQ0=13;MQRankSum=0.484;QD=17.25;ReadPosRankSum=-2.201;VQSLOD=1.5853;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,29:35:9.17:36,9,0	0/0:6,0:6:11.95:0,12,157	0/0:25,0:12:33.03:0,33,490	0/0:39,0:25:39.18:0,39,864	0/0:23,0:23:56.90:0,57,784	0/0:15,0:15:36.04:0,36,534	1/1:24,2:26:70.66:822,71,0	1/1:18,1:19:45.15:612,45,0	0/0:26,0:25:56.62:0,57,711	0/0:15,0:14:36.02:0,36,540	0/0:14,0:13:26.96:0,27,306	0/0:28,0:28:53.51:0,54,607	0/0:26,0:26:52.77:0,53,802	0/0:17,0:17:38.53:0,39,502	0/0:38,0:38:99:0,102,1420	0/0:26,0:25:66.49:0,66,970	0/0:36,0:35:80.92:0,81,1015	0/0:30,0:30:65.67:0,66,863	1/1:16,0:16:41.84:511,42,0	1/1:6,0:6:2.90:20,3,0	0/0:32,0:31:80.88:0,81,1206	0/0:17,0:17:44.92:0,45,596	0/0:11,0:11:26.97:0,27,353	0/0:41,0:41:99:0,107,1417	0/0:25,0:25:65.80:0,66,859	0/0:34,0:34:72.04:0,72,1041	1/1:12,1:13:14.82:160,15,0	0/0:8,0:8:21.02:0,21,309
chr10	82869783	.	GTGGTGT	G	1701.09	PASS	AB=0.840;AC=7;AF=0.125;AN=56;BaseQRankSum=0.184;DP=659;FS=27.211;HRun=0;HaplotypeScore=147.4864;InbreedingCoeff=0.3854;MQ=63.28;MQ0=15;MQRankSum=-0.505;QD=20.01;ReadPosRankSum=-1.965;VQSLOD=1.5325;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:1.13:0,1,294	0/0:5,0:5:12.04:0,12,179	0/0:24,0:11:33:0,33,485	0/0:37,0:23:39.65:0,40,864	0/0:26,0:25:46.71:0,47,849	0/0:16,0:16:27.63:0,28,594	0/1:28,0:28:99:672,0,110	0/1:19,0:19:23.14:561,0,23	0/0:24,0:23:56.40:0,56,954	0/0:19,0:18:52.85:0,53,771	0/0:13,0:12:25.50:0,25,326	0/0:28,0:28:52.56:0,53,787	0/0:30,0:30:79.37:0,79,1199	0/0:15,0:15:39.12:0,39,691	0/0:41,0:41:99:0,112,1744	0/0:24,0:23:66.69:0,67,1398	0/0:34,0:33:81.73:0,82,1280	0/0:26,0:26:64.64:0,65,992	1/1:4,15:19:21.97:525,22,0	1/1:0,4:5:2.97:20,3,0	0/0:33,0:32:84.01:0,84,1311	0/0:18,0:18:47.83:0,48,753	0/0:13,0:13:13.06:0,13,431	0/0:42,0:42:95:0,95,1680	0/0:26,0:25:65.43:0,65,1083	0/0:35,0:35:47.04:0,47,960	0/1:1,0:14:14.42:54,0,14	0/0:8,0:8:13.16:0,13,282
chr10	82869785	.	GGT	G	3450.90	PASS	AB=0.929;AC=42;AF=0.808;AN=52;BaseQRankSum=-0.382;DP=681;FS=0.000;HRun=0;HaplotypeScore=102.6683;InbreedingCoeff=0.3929;MQ=61.77;MQ0=18;MQRankSum=0.021;QD=6.52;ReadPosRankSum=2.825;VQSLOD=3.1526;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:29.92:0,30,331	1/1:4,1:5:3.48:33,3,0	./.	0/0:36,0:22:0:0,0,0	1/1:24,1:26:22.91:184,23,0	1/1:13,1:16:11.77:108,12,0	0/0:26,0:28:12.58:0,13,96	./.	1/1:18,7:24:20.72:209,21,0	0/1:19,0:19:17.18:214,0,17	1/1:6,2:11:11.70:93,12,0	1/1:14,14:29:26.47:241,26,0	0/1:26,4:32:2.78:334,0,3	1/1:10,6:16:8.91:97,9,0	1/1:37,5:42:29.80:302,30,0	0/1:22,2:23:43.97:44,0,202	1/1:24,10:33:20.29:214,20,0	1/1:18,6:26:20.85:196,21,0	1/1:19,0:19:8.69:60,9,0	0/1:5,0:5:0:0,0,0	1/1:35,2:35:7.30:146,7,0	1/1:17,2:19:14.63:140,15,0	1/1:12,1:13:11.52:107,12,0	1/1:33,7:44:44.05:391,44,0	1/1:17,10:26:20.89:209,21,0	1/1:19,0:34:8.47:42,8,0	1/1:14,0:14:5.20:72,5,0	1/1:7,0:8:2.84:14,3,0
chr10	82870166	.	T	TCC	6871.27	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=17.842;DP=701;FS=0.000;HRun=0;HaplotypeScore=107.1812;InbreedingCoeff=0.9975;MQ=82.26;MQ0=0;MQRankSum=-7.075;QD=37.55;ReadPosRankSum=-0.037;VQSLOD=6.6900;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,54:62:99:2396,148,0	0/0:7,0:7:21.07:0,21,343	0/0:21,0:21:57.12:0,57,873	0/0:23,0:23:59.62:0,60,858	0/0:36,0:36:99:0,108,1759	0/0:14,0:14:42.14:0,42,685	1/1:3,22:25:73.45:969,73,0	1/1:9,22:31:61.63:986,62,0	0/0:22,0:22:63.22:0,63,1028	0/0:26,0:26:78.27:0,78,1273	0/0:22,0:22:66.21:0,66,1052	0/0:26,0:26:78.27:0,78,1273	0/0:33,0:33:99:0,99,1612	0/0:21,0:21:63.20:0,63,1000	0/0:36,0:36:99:0,108,1759	0/0:24,0:24:72.23:0,72,1150	0/0:20,0:20:59.93:0,60,918	0/0:25,0:25:72.25:0,72,1172	1/1:3,16:22:55.25:836,55,0	1/1:2,22:24:52.10:906,52,0	0/0:22,0:22:52.68:0,53,992	0/0:21,0:21:57.19:0,57,922	0/0:14,0:14:42.13:0,42,662	0/0:37,0:37:99:0,111,1808	0/0:24,0:24:72.24:0,72,1154	0/0:38,0:38:99:0,114,1838	1/1:1,18:19:57.14:779,57,0	0/0:6,0:6:18.06:0,18,293
chr10	82870167	.	T	TC	4682.44	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=18.081;DP=701;FS=2.321;HRun=0;HaplotypeScore=100.6593;InbreedingCoeff=0.9975;MQ=82.26;MQ0=0;MQRankSum=-7.410;QD=25.73;ReadPosRankSum=0.385;VQSLOD=5.4757;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,54:60:99:1631,148,0	0/0:7,0:7:21.07:0,21,293	0/0:21,0:21:57.18:0,57,769	0/0:23,0:23:62.99:0,63,774	0/0:36,0:36:99:0,108,1490	0/0:14,0:14:42.14:0,42,587	1/1:3,22:25:69.08:644,69,0	1/1:9,22:31:67.20:703,67,0	0/0:22,0:22:66.21:0,66,906	0/0:26,0:26:78.26:0,78,1090	0/0:22,0:22:66.20:0,66,888	0/0:27,0:27:78.26:0,78,1090	0/0:35,0:35:99:0,99,1351	0/0:20,0:20:60.20:0,60,838	0/0:36,0:36:99:0,108,1493	0/0:23,0:23:69.23:0,69,965	0/0:19,0:20:59.39:0,59,785	0/0:25,0:25:72.23:0,72,988	1/1:7,16:23:50.51:560,51,0	1/1:2,22:24:40.77:610,41,0	0/0:22,0:22:61.76:0,62,843	0/0:22,0:22:63.13:0,63,802	0/0:14,0:14:39.13:0,39,545	0/0:37,0:37:99:0,111,1531	0/0:23,0:23:69.23:0,69,964	0/0:38,0:38:99:0,114,1579	1/1:1,18:19:56.28:534,56,0	0/0:6,0:6:18.06:0,18,251
chr10	82870480	.	GA	G	3468.38	PASS	AB=0.737;AC=40;AF=0.714;AN=56;BaseQRankSum=0.555;DP=714;FS=12.270;HRun=16;HaplotypeScore=85.7648;InbreedingCoeff=-0.4153;MQ=77.08;MQ0=2;MQRankSum=-1.069;QD=4.86;ReadPosRankSum=6.059;VQSLOD=0.8179;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:35:28.74:83,29,0	0/1:6,4:10:13.53:42,0,14	0/1:22,1:18:21.90:22,0,30	0/1:19,1:17:10.41:10,0,30	1/1:13,13:27:2.64:123,3,0	1/1:13,11:25:16.93:202,17,0	1/1:9,12:29:32.46:210,32,0	0/1:26,10:37:77.38:124,0,77	1/1:12,9:21:9.36:153,9,0	1/1:14,13:28:34.92:196,35,0	0/1:16,11:27:9.47:173,0,9	0/1:25,9:34:45.85:136,0,46	0/1:21,11:32:37.38:125,0,37	1/1:16,12:28:21.94:141,22,0	0/1:14,14:30:3.89:151,0,4	0/1:18,9:27:58.31:109,0,58	1/1:12,12:29:4.34:186,4,0	0/1:10,12:25:25.38:183,0,25	0/1:18,6:25:15.44:122,0,15	0/1:14,4:20:21.58:82,0,22	0/1:9,4:14:33.60:43,0,34	1/1:12,7:20:18.34:101,18,0	0/1:14,9:25:20.73:91,0,21	1/1:13,20:33:20.85:243,21,0	1/1:12,4:18:2.06:59,2,0	1/1:21,17:38:8.13:167,8,0	0/1:10,10:22:33.58:119,0,34	0/1:1,6:9:13.10:73,0,13
chr10	82872097	.	G	GTCCGGTGTTAGCATAATGGA	82724.47	PASS	AB=0.700;AC=55;AF=0.982;AN=56;BaseQRankSum=-6.814;DP=457;FS=2.215;HRun=0;HaplotypeScore=329.6116;InbreedingCoeff=-0.0320;MQ=52.36;MQ0=0;MQRankSum=-0.728;QD=181.02;ReadPosRankSum=5.124;VQSLOD=3.9461;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:20:51.15:3116,51,0	1/1:1,0:13:36.11:2681,36,0	1/1:3,1:5:10.27:526,10,0	0/1:4,0:7:37.01:518,0,37	1/1:1,0:16:38.38:2332,38,0	1/1:0,0:15:45.15:3602,45,0	1/1:0,0:14:1.98:1706,2,0	1/1:1,0:19:44.45:1997,44,0	1/1:2,0:20:53.67:3846,54,0	1/1:2,0:21:52.72:4468,53,0	1/1:2,0:12:29.85:1642,30,0	1/1:2,0:24:69.22:5178,69,0	1/1:0,0:22:66.23:5447,66,0	1/1:2,0:26:57:4228,57,0	1/1:2,0:36:75.19:7246,75,0	1/1:0,0:29:79.01:6514,79,0	1/1:0,0:12:26.86:1938,27,0	1/1:1,0:5:15.05:811,15,0	1/1:1,0:7:18.05:883,18,0	1/1:2,0:17:29.07:2779,29,0	1/1:0,0:2:6.02:467,6,0	1/1:2,0:12:32.66:2082,33,0	1/1:1,0:11:23.44:1635,23,0	1/1:1,0:11:27.09:1419,27,0	1/1:1,0:21:63.22:4460,63,0	1/1:1,0:18:51.11:3449,51,0	1/1:3,0:31:75.65:5822,76,0	1/1:0,0:9:23.43:1932,23,0
chr10	82873974	.	AAAG	A	1744.44	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=8.018;DP=614;FS=2.706;HRun=0;HaplotypeScore=121.5279;InbreedingCoeff=0.5228;MQ=58.18;MQ0=4;MQRankSum=-2.357;QD=6.08;ReadPosRankSum=-6.659;VQSLOD=0.4463;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:37:85.92:481,86,0	0/0:7,0:7:21.04:0,21,259	0/0:17,0:7:14.73:0,15,208	0/0:22,0:7:14.51:0,15,133	0/0:21,0:21:53.92:0,54,614	0/0:23,0:23:53.69:0,54,753	1/1:26,0:25:39.80:212,40,0	1/1:28,1:29:37.63:354,38,0	0/0:17,0:17:18.91:0,19,345	0/1:20,0:20:45.92:46,0,426	0/0:17,0:17:8.66:0,9,465	0/0:20,0:20:27.07:0,27,362	0/0:23,0:23:23.74:0,24,652	0/1:16,0:16:9.85:10,0,220	0/0:24,0:24:20.21:0,20,638	0/1:16,0:16:58.65:59,0,303	0/1:46,0:46:2.52:3,0,1404	0/0:32,0:32:47.67:0,48,881	1/1:12,1:13:21.29:240,21,0	1/1:23,1:22:26.35:175,26,0	0/0:8,0:8:20.97:0,21,245	0/1:18,0:18:27.05:27,0,392	0/1:18,0:18:73.07:73,0,281	0/0:28,0:28:38.72:0,39,785	0/0:16,0:16:26.11:0,26,427	0/0:28,0:27:78.09:0,78,1135	1/1:19,2:21:32.29:260,32,0	0/0:24,0:24:71.82:0,72,1105
chr10	82873975	.	AAG	A	3775.77	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=6.977;DP=608;FS=0.372;HRun=0;HaplotypeScore=105.0534;InbreedingCoeff=0.8741;MQ=59.21;MQ0=4;MQRankSum=-3.744;QD=22.47;ReadPosRankSum=-5.303;VQSLOD=2.2465;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,22:37:95.84:1250,96,0	0/0:7,0:7:21.03:0,21,205	0/0:15,0:7:11.42:0,11,171	0/0:21,0:7:10.54:0,11,107	0/0:21,0:21:56.62:0,57,514	0/0:23,0:23:59.99:0,60,573	1/1:3,22:24:44.98:631,45,0	1/1:6,23:29:48.12:717,48,0	0/0:18,0:18:39.58:0,40,338	0/0:20,0:20:28.89:0,29,422	0/0:17,0:17:32.39:0,32,368	0/0:20,0:20:26.86:0,27,234	0/0:23,0:23:44.94:0,45,533	0/0:15,0:15:17.77:0,18,198	0/0:24,0:24:14.45:0,14,496	0/0:16,0:16:11.80:0,12,252	0/0:46,0:46:87.99:0,88,1119	0/0:32,0:32:68.90:0,69,682	1/1:8,5:13:24.23:384,24,0	1/1:6,17:21:35.65:346,36,0	0/0:8,0:8:20.93:0,21,185	0/0:18,0:18:35.05:0,35,386	0/1:17,0:17:19.27:19,0,221	0/0:28,0:28:60.04:0,60,625	0/0:16,0:16:38.86:0,39,371	0/0:28,0:27:78.12:0,78,988	1/1:5,16:20:32.44:428,32,0	0/0:24,0:24:70.62:0,71,944
chr10	82873976	.	AG	A	2327.17	PASS	AB=0.976;AC=14;AF=0.250;AN=56;BaseQRankSum=8.633;DP=609;FS=1.646;HRun=1;HaplotypeScore=101.9059;InbreedingCoeff=0.7697;MQ=60.24;MQ0=4;MQRankSum=-2.982;QD=12.79;ReadPosRankSum=-5.770;VQSLOD=0.3484;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:35,5:37:93.35:742,93,0	0/0:7,0:7:20.67:0,21,142	0/1:15,0:8:9.76:10,0,134	0/1:19,1:7:14.13:14,0,77	0/0:21,0:21:51.63:0,52,383	0/0:23,0:23:58.48:0,58,361	1/1:23,2:24:44.81:372,45,0	1/1:26,1:27:46.69:571,47,0	0/0:18,0:18:22.46:0,22,205	0/0:21,0:21:9.76:0,10,275	0/0:17,0:17:17.91:0,18,212	0/0:20,0:20:25.91:0,26,152	0/0:23,0:23:45.64:0,46,355	0/0:15,0:15:19.15:0,19,152	0/0:23,1:24:33.97:0,34,343	0/0:16,0:16:16.12:0,16,159	0/0:47,0:47:56.01:0,56,676	0/0:32,0:32:69.13:0,69,463	1/1:12,1:13:33.67:250,34,0	1/1:20,2:20:35.34:308,35,0	0/0:9,0:9:20.42:0,20,119	0/0:18,0:18:37.72:0,38,275	0/0:17,1:18:1.24:0,1,148	0/0:29,0:29:60.10:0,60,394	0/0:16,0:16:37.99:0,38,245	0/0:28,0:27:77.26:0,77,804	1/1:19,1:19:31.97:250,32,0	0/0:25,0:25:64.21:0,64,740
chr10	82873977	.	G	GA	6999.66	PASS	AB=0.924;AC=41;AF=0.732;AN=56;BaseQRankSum=-10.412;DP=618;FS=4.325;HRun=11;HaplotypeScore=88.8485;InbreedingCoeff=0.4051;MQ=60.51;MQ0=4;MQRankSum=1.285;QD=13.13;ReadPosRankSum=1.708;VQSLOD=5.1210;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:36:3.35:3,0,47	1/1:3,4:7:12.02:122,12,0	0/0:13,0:8:13.37:0,13,80	0/0:18,0:7:6.58:0,7,33	1/1:8,13:21:12.80:301,13,0	1/1:4,22:26:51.10:518,51,0	0/1:25,0:24:20.58:21,0,21	0/1:26,1:27:35.20:73,0,35	1/1:2,17:19:36.02:365,36,0	1/1:6,18:24:30.12:456,30,0	1/1:3,14:17:12.83:309,13,0	1/1:3,0:21:19.88:100,20,0	0/1:6,17:23:21.53:342,0,22	1/1:2,12:15:17.87:166,18,0	1/1:7,17:24:44.76:437,45,0	1/1:2,14:16:35.94:349,36,0	1/1:15,31:47:50.19:993,50,0	1/1:8,23:32:56.95:562,57,0	0/1:13,0:13:2.18:56,0,2	0/1:22,0:20:6.50:7,0,16	1/1:2,7:9:14.56:151,15,0	1/1:4,15:19:39.08:394,39,0	1/1:4,16:20:35.86:348,36,0	1/1:4,26:30:60.12:609,60,0	1/1:2,14:17:12.57:294,13,0	0/0:27,1:27:26.28:0,26,386	0/1:19,1:19:19.39:23,0,19	0/0:24,0:24:54.27:0,54,443
chr10	82875489	.	G	GA	14190.48	PASS	AB=0.921;AC=49;AF=0.875;AN=56;BaseQRankSum=-9.945;DP=618;FS=0.461;HRun=8;HaplotypeScore=58.4545;InbreedingCoeff=0.7973;MQ=84.98;MQ0=0;MQRankSum=-3.964;QD=25.07;ReadPosRankSum=4.273;VQSLOD=5.3886;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,41:49:92.89:1323,93,0	1/1:1,2:3:6.02:69,6,0	0/0:21,0:21:12.91:0,13,393	0/0:18,0:18:35.99:0,36,323	1/1:4,16:20:23.68:525,24,0	1/1:5,14:19:43.37:488,43,0	1/1:3,17:19:20.68:492,21,0	1/1:3,19:22:54.13:603,54,0	1/1:1,22:23:60.18:692,60,0	1/1:3,15:18:45.10:498,45,0	1/1:2,7:9:18.05:208,18,0	1/1:1,17:18:48.14:554,48,0	1/1:3,22:25:60.18:692,60,0	1/1:5,28:33:50.77:838,51,0	1/1:4,22:26:66.20:762,66,0	1/1:1,14:15:39.12:450,39,0	1/1:2,19:21:54.13:610,54,0	1/1:4,23:27:63.19:727,63,0	1/1:9,18:27:30.94:588,31,0	1/1:1,16:19:53.78:568,54,0	1/1:2,33:35:93.28:1073,93,0	1/1:3,17:21:50.98:568,51,0	1/1:4,24:28:38.73:698,39,0	1/1:2,12:14:33.10:381,33,0	1/1:3,18:21:27.08:311,27,0	0/1:32,3:35:19.83:20,0,599	1/1:3,15:18:39.12:450,39,0	0/0:13,0:13:39:0,39,348
chr10	82875897	.	TAAAAA	T	9576.47	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=1.378;DP=624;FS=5.098;HRun=16;HaplotypeScore=129.7148;InbreedingCoeff=0.9809;MQ=74.29;MQ0=2;MQRankSum=-5.869;QD=26.31;ReadPosRankSum=10.399;VQSLOD=2.4315;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:31:21.02:0,21,420	1/1:1,4:5:8.94:109,9,0	0/0:40,0:24:11.30:0,11,172	0/0:35,0:19:23.56:0,24,224	1/1:4,14:18:35.17:445,35,0	1/1:5,17:22:30.95:655,31,0	0/0:7,0:20:27.08:0,27,617	0/0:19,0:26:36.11:0,36,791	1/1:3,11:15:29.51:414,30,0	1/1:5,18:25:60.06:857,60,0	1/1:5,11:17:29.44:429,29,0	1/1:5,15:21:36.11:612,36,0	1/1:5,14:20:36.01:548,36,0	1/1:6,19:25:45:681,45,0	1/1:5,18:24:39.01:574,39,0	1/1:0,20:20:41.45:653,41,0	1/1:8,15:23:22.66:338,23,0	1/1:4,17:21:32.02:676,32,0	0/0:10,0:20:48.16:0,48,1137	0/0:7,0:20:54.14:0,54,1041	1/1:2,17:19:31.92:474,32,0	1/1:7,9:17:16.57:290,17,0	1/1:7,15:22:18.33:439,18,0	1/1:7,22:29:36.86:791,37,0	1/1:4,16:21:39.01:590,39,0	0/0:22,0:25:42.13:0,42,887	0/0:7,0:27:32.76:0,33,694	0/0:13,0:14:27.07:0,27,642
chr10	82881199	.	T	TG	1905.39	PASS	AB=0.775;AC=39;AF=0.750;AN=52;BaseQRankSum=-0.106;DP=373;FS=0.938;HRun=10;HaplotypeScore=141.7488;InbreedingCoeff=-0.1347;MQ=65.51;MQ0=0;MQRankSum=-3.749;QD=5.40;ReadPosRankSum=-1.224;VQSLOD=0.8847;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:14:12.24:74,12,0	./.	0/1:12,0:10:6.67:7,0,84	0/0:11,1:10:4.48:0,4,66	1/1:8,2:11:6.02:64,6,0	0/1:13,1:14:9.97:66,0,10	1/1:13,0:17:10.29:47,10,0	1/1:10,0:10:5.92:39,6,0	1/1:11,8:19:18:178,18,0	1/1:3,6:9:12.03:128,12,0	0/1:2,3:5:8.13:55,0,8	0/1:16,7:23:6.81:129,0,7	0/1:15,7:22:12.53:83,0,13	0/1:21,5:26:9.05:112,0,9	1/1:9,3:12:3.01:32,3,0	1/1:6,10:16:18.05:192,18,0	0/1:6,12:18:21.31:196,0,21	0/1:5,11:16:13.24:218,0,13	1/1:13,0:13:9.37:61,9,0	0/1:5,0:5:0:0,0,0	0/1:20,6:26:37.25:52,0,37	1/1:4,4:8:9.02:94,9,0	./.	0/1:5,11:16:12.77:66,0,13	1/1:5,1:6:8.92:69,9,0	1/1:10,0:10:4.09:18,4,0	1/1:17,0:17:5.80:33,6,0	1/1:8,0:8:5.80:33,6,0
chr10	82886121	.	TC	T	5294.68	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.655;DP=669;FS=1.559;HRun=3;HaplotypeScore=73.1053;InbreedingCoeff=0.9983;MQ=92.46;MQ0=0;MQRankSum=-3.525;QD=33.72;ReadPosRankSum=-1.291;VQSLOD=4.8108;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:78.25:967,78,0	0/0:6,0:6:18.06:0,18,255	0/0:29,0:29:72.10:0,72,935	0/0:30,0:30:83.62:0,84,1080	0/0:21,0:21:57.19:0,57,817	0/0:18,0:18:51.17:0,51,734	1/1:0,25:25:66.21:818,66,0	1/1:1,30:31:93.26:1133,93,0	0/0:34,0:34:99:0,102,1467	0/0:20,0:20:57.14:0,57,774	0/0:13,0:13:39.13:0,39,561	0/0:29,0:29:87.26:0,87,1200	0/0:23,0:23:69.23:0,69,981	0/0:26,0:26:69.22:0,69,960	0/0:32,0:32:96.31:0,96,1361	0/0:31,0:31:90.29:0,90,1275	0/0:40,0:40:99:0,120,1689	0/0:30,0:30:90.29:0,90,1278	1/1:2,14:16:42.13:520,42,0	1/1:2,26:28:72.23:891,72,0	0/0:34,0:34:93.26:0,93,1267	0/0:15,0:15:42.14:0,42,604	0/0:15,0:15:39.12:0,39,543	0/0:19,0:19:57.19:0,57,821	0/0:13,0:13:39.12:0,39,544	0/0:18,0:18:54.17:0,54,760	1/1:1,27:28:78.25:966,78,0	0/0:16,0:16:48.14:0,48,672
chr10	82887260	.	CT	C	9864.06	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.495;DP=524;FS=42.758;HRun=10;HaplotypeScore=86.7749;InbreedingCoeff=0.9529;MQ=63.93;MQ0=4;MQRankSum=-4.104;QD=20.17;ReadPosRankSum=4.379;VQSLOD=2.8616;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,22:27:62.97:547,63,0	1/1:1,3:4:9:78,9,0	0/0:18,0:12:15.29:0,15,137	0/0:17,0:15:21.29:0,21,291	1/1:5,24:29:59.97:521,60,0	1/1:1,15:16:44.97:386,45,0	1/1:5,9:12:17.98:156,18,0	1/1:11,20:29:59.97:518,60,0	1/1:1,10:11:26.99:234,27,0	1/1:4,12:16:38.97:337,39,0	1/1:7,18:26:61.97:519,62,0	1/1:1,16:17:44.99:391,45,0	1/1:4,12:16:35.98:312,36,0	1/1:1,17:18:50.99:443,51,0	1/1:1,11:11:29.99:260,30,0	1/1:5,20:25:59.97:521,60,0	1/1:7,15:20:44.98:390,45,0	1/1:3,16:19:39.60:406,40,0	1/1:4,13:16:38.98:337,39,0	1/1:2,16:18:50.99:442,51,0	1/1:1,13:14:29.99:260,30,0	1/1:1,8:9:20.98:182,21,0	1/1:6,8:14:32.98:286,33,0	1/1:3,22:25:50.97:442,51,0	1/1:6,10:16:32.97:286,33,0	1/1:5,27:32:89.98:781,90,0	1/1:6,23:29:68.95:595,69,0	1/1:2,8:10:26.99:234,27,0
chr10	82887284	.	CT	C	6923.06	PASS	AB=0.654;AC=51;AF=0.944;AN=54;BaseQRankSum=-1.512;DP=487;FS=6.061;HRun=9;HaplotypeScore=88.1114;InbreedingCoeff=0.3393;MQ=42.50;MQ0=17;MQRankSum=-1.327;QD=14.57;ReadPosRankSum=0.827;VQSLOD=4.9220;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,23:25:51.01:465,51,0	1/1:0,2:2:6:54,6,0	./.	0/0:7,0:5:2.74:0,3,12	1/1:7,26:32:44.98:406,45,0	1/1:4,16:19:36.02:329,36,0	1/1:1,6:5:12:110,12,0	1/1:8,18:24:54:486,54,0	1/1:3,8:11:14.94:133,15,0	1/1:9,8:17:7.20:200,7,0	1/1:5,18:23:32.98:301,33,0	1/1:0,15:14:36.02:329,36,0	1/1:2,11:13:18.01:163,18,0	1/1:9,13:22:29.98:270,30,0	1/1:5,9:11:20.98:183,21,0	1/1:10,13:21:38.97:349,39,0	1/1:13,11:19:20.96:187,21,0	0/1:8,9:16:7.40:187,0,7	1/1:11,9:19:20.96:191,21,0	1/1:5,18:22:32.99:301,33,0	1/1:5,5:9:14.98:131,15,0	1/1:2,12:15:26.04:224,26,0	1/1:4,7:10:17.99:159,18,0	1/1:9,10:19:29.96:265,30,0	1/1:2,11:13:27.01:247,27,0	1/1:6,25:31:69.01:629,69,0	1/1:6,26:31:66:597,66,0	1/1:3,1:4:3:27,3,0
chr10	82887905	.	CTT	C	7188.51	PASS	AB=0.806;AC=40;AF=0.714;AN=56;BaseQRankSum=-10.605;DP=468;FS=1.391;HRun=11;HaplotypeScore=80.8275;InbreedingCoeff=0.8236;MQ=79.06;MQ0=1;MQRankSum=-0.647;QD=22.82;ReadPosRankSum=3.707;VQSLOD=4.7024;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:1,1:29:20.76:0,21,139	1/1:0,8:8:21.05:224,21,0	0/0:27,0:23:12.82:0,13,436	0/1:19,0:13:6.54:7,0,7	1/1:1,25:26:63.06:658,63,0	1/1:0,17:17:48.12:510,48,0	0/0:2,0:16:29.94:0,30,103	0/0:5,0:23:44.76:0,45,170	1/1:0,9:9:27.07:287,27,0	1/1:1,17:19:47.88:510,48,0	1/1:1,11:12:30.07:319,30,0	1/1:1,17:18:51.12:543,51,0	1/1:1,14:15:33.08:351,33,0	1/1:1,16:16:39.08:410,39,0	1/1:0,16:16:42.11:447,42,0	1/1:1,13:14:33.08:351,33,0	1/1:5,23:30:53.98:636,54,0	1/1:2,16:18:42.09:447,42,0	0/0:4,0:11:17.47:0,17,60	0/0:5,1:22:14:0,14,130	1/1:2,6:8:15.04:160,15,0	1/1:1,5:6:12.03:128,12,0	1/1:0,5:6:8.97:151,9,0	1/1:1,7:8:18.04:190,18,0	1/1:0,20:20:57.14:607,57,0	1/1:1,0:18:41.17:190,41,0	0/0:4,0:25:53.77:0,54,245	0/1:4,0:11:14.21:61,0,14
chr10	82888037	.	GTA	G	18853.50	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.309;DP=559;FS=1.051;HRun=0;HaplotypeScore=115.4405;InbreedingCoeff=0.9832;MQ=67.56;MQ0=3;MQRankSum=-2.494;QD=35.57;ReadPosRankSum=5.411;VQSLOD=7.0152;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:34:63.21:963,63,0	1/1:0,12:12:24.08:367,24,0	0/0:12,0:11:13.22:0,13,293	0/0:16,0:11:23.97:0,24,223	1/1:1,29:29:66.22:1009,66,0	1/1:0,15:15:30.10:459,30,0	1/1:0,24:24:60.20:917,60,0	1/1:2,32:34:96.29:1420,96,0	1/1:1,23:23:48.16:734,48,0	1/1:1,30:31:90.30:1354,90,0	1/1:0,25:25:57.19:867,57,0	1/1:0,21:21:39.13:596,39,0	1/1:0,13:13:27.09:413,27,0	1/1:0,17:17:33.11:505,33,0	1/1:0,14:14:39.13:596,39,0	1/1:1,16:17:45.15:674,45,0	1/1:1,17:17:35.63:550,36,0	1/1:1,16:16:42.14:641,42,0	1/1:1,17:18:51.14:719,51,0	1/1:0,12:12:27.09:413,27,0	1/1:1,22:23:54.10:774,54,0	1/1:0,17:17:39.13:594,39,0	1/1:0,11:11:30.10:459,30,0	1/1:0,17:17:30.10:459,30,0	1/1:0,23:23:54.18:826,54,0	1/1:1,30:30:90.29:1354,90,0	1/1:1,17:18:42.14:641,42,0	1/1:0,13:13:36.12:550,36,0
chr10	82888593	.	G	GA	7841.93	PASS	AB=0.774;AC=50;AF=0.893;AN=56;BaseQRankSum=-3.308;DP=587;FS=6.309;HRun=11;HaplotypeScore=66.8379;InbreedingCoeff=-0.0837;MQ=55.09;MQ0=28;MQRankSum=-0.490;QD=13.36;ReadPosRankSum=0.451;VQSLOD=4.8044;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,30:40:42.20:391,42,0	1/1:2,12:14:26.79:256,27,0	0/1:8,0:4:5.96:6,0,17	0/1:3,0:4:11.17:11,0,40	1/1:11,15:25:37.43:347,37,0	1/1:12,15:25:1.52:216,2,0	1/1:8,20:26:24.86:434,25,0	1/1:19,13:32:3.88:515,4,0	1/1:7,17:22:21.77:390,22,0	1/1:6,18:23:51.05:493,51,0	0/1:14,8:22:16.50:343,0,16	0/1:5,11:16:19.39:186,0,19	1/1:2,7:9:21.04:213,21,0	1/1:11,12:24:0.64:172,1,0	0/1:12,10:22:2.05:286,0,2	1/1:3,10:11:21.04:213,21,0	1/1:9,17:21:36.07:365,36,0	1/1:9,17:23:41.72:452,42,0	1/1:6,15:20:41.88:394,42,0	1/1:7,14:20:15.83:338,16,0	1/1:7,9:15:21:203,21,0	1/1:5,7:12:3.79:210,4,0	1/1:12,13:25:15.80:180,16,0	1/1:3,18:22:44.92:441,45,0	1/1:6,12:16:0.81:186,1,0	1/1:6,1:27:55.29:289,55,0	0/1:8,11:19:36.59:224,0,37	1/1:5,1:9:14.37:87,14,0
chr10	82888926	.	A	AAAC	18108.03	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=2.794;DP=582;FS=1.101;HRun=0;HaplotypeScore=178.9045;InbreedingCoeff=0.8922;MQ=46.19;MQ0=3;MQRankSum=-4.088;QD=33.29;ReadPosRankSum=3.509;VQSLOD=4.9064;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:56.76:551,57,0	1/1:4,6:10:18.06:357,18,0	0/0:30,0:22:23.23:0,23,351	0/0:8,0:6:9.02:0,9,104	1/1:11,7:17:39.10:632,39,0	1/1:11,8:19:48.12:816,48,0	1/1:34,0:34:71.81:743,72,0	1/1:29,0:22:26.90:255,27,0	1/1:13,10:23:51.15:939,51,0	1/1:16,5:21:39.05:664,39,0	1/1:10,11:20:4.14:718,4,0	1/1:9,14:23:48.16:952,48,0	1/1:8,10:18:48.16:910,48,0	1/1:6,12:18:45.14:856,45,0	1/1:9,10:19:45.13:832,45,0	1/1:13,14:27:69.19:1208,69,0	1/1:14,12:26:57.18:1029,57,0	1/1:20,8:27:42.06:693,42,0	1/1:18,0:16:29.02:315,29,0	1/1:16,0:15:39.02:475,39,0	1/1:9,8:16:27.06:481,27,0	1/1:10,10:20:45.13:814,45,0	1/1:11,7:17:35.98:621,36,0	1/1:12,11:23:51.07:934,51,0	1/1:10,9:18:36.04:645,36,0	1/1:9,14:22:57.17:1051,57,0	1/1:23,0:23:53.98:614,54,0	./.
chr10	82888949	.	A	AC	2852.86	PASS	AB=0.952;AC=25;AF=0.463;AN=54;BaseQRankSum=-1.189;DP=643;FS=11.236;HRun=0;HaplotypeScore=235.2537;InbreedingCoeff=-0.8625;MQ=47.65;MQ0=3;MQRankSum=-3.898;QD=4.79;ReadPosRankSum=6.752;VQSLOD=1.7311;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,8:33:99:126,0,549	0/1:10,0:10:52.42:52,0,97	0/0:35,0:22:47.20:0,47,658	0/0:12,0:10:20.06:0,20,255	0/1:22,0:21:99:110,0,292	0/1:22,0:22:99:187,0,109	0/1:23,9:32:99:154,0,624	0/1:23,10:26:55.36:55,0,701	0/1:21,0:21:99:120,0,172	0/1:23,0:23:42.59:43,0,478	0/1:25,0:24:99:117,0,165	0/1:24,0:24:99:132,0,110	0/1:23,0:23:99:194,0,245	0/1:23,0:23:99:141,0,191	0/1:19,0:19:99:112,0,162	0/1:32,0:32:99:220,0,218	0/1:28,0:28:99:185,0,238	0/1:23,0:22:99:114,0,308	0/1:23,2:24:25.32:25,0,637	0/1:16,5:20:46.29:46,0,528	0/1:15,0:14:75.84:76,0,102	0/1:24,0:24:99:138,0,198	0/1:18,0:17:79.76:80,0,199	0/1:25,0:24:99:138,0,247	0/1:19,0:18:99:105,0,183	0/1:33,0:32:99:190,0,410	0/1:14,9:23:99:143,0,421	./.
chr10	82888951	.	A	AC	241.19	PASS	AB=0.803;AC=6;AF=0.111;AN=54;BaseQRankSum=1.502;DP=646;FS=5.796;HRun=0;HaplotypeScore=253.8710;InbreedingCoeff=-0.1213;MQ=50.71;MQ0=3;MQRankSum=-7.386;QD=1.46;ReadPosRankSum=0.229;VQSLOD=2.0544;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,7:30:59.36:59,0,577	0/0:10,0:10:26.67:0,27,236	0/0:37,0:24:56.94:0,57,698	0/0:13,0:11:28.53:0,29,287	0/0:22,0:21:61.89:0,62,587	0/0:24,0:24:64.90:0,65,521	0/1:25,9:34:98.30:98,0,683	0/1:22,10:25:11:11,0,715	0/0:22,0:22:61.38:0,61,513	0/0:22,0:22:65.62:0,66,724	0/0:24,0:23:58.79:0,59,472	0/0:24,0:24:62.28:0,62,512	0/0:23,0:23:63.31:0,63,521	0/0:23,0:23:68.20:0,68,594	0/0:19,0:19:56.31:0,56,501	0/0:32,0:32:88.18:0,88,759	0/0:28,0:28:79.87:0,80,673	0/0:22,0:21:59.01:0,59,595	0/1:23,2:24:10.22:10,0,657	0/1:16,4:20:43.85:44,0,546	0/0:16,0:15:38.46:0,38,324	0/0:24,0:24:64.23:0,64,537	0/0:18,0:17:50.51:0,51,466	0/0:25,0:24:74.22:0,74,666	0/0:21,0:20:50.28:0,50,450	0/0:32,0:31:91.42:0,91,845	0/1:14,7:23:99:139,0,435	./.
chr10	82888959	.	AAC	A	273.05	PASS	AB=0.980;AC=11;AF=0.204;AN=54;BaseQRankSum=1.390;DP=616;FS=16.183;HRun=0;HaplotypeScore=256.9863;InbreedingCoeff=0.1632;MQ=58.44;MQ0=3;MQRankSum=-1.763;QD=1.20;ReadPosRankSum=-3.734;VQSLOD=0.5797;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:12.55:78,0,13	0/0:9,0:9:4.24:0,4,9	0/0:33,0:23:44.64:0,45,897	0/0:15,0:13:31.54:0,32,432	0/0:22,0:21:15.48:0,15,58	0/0:22,0:22:6.07:0,6,12	1/1:26,3:29:3.61:114,4,0	0/1:25,2:24:15.13:33,0,15	0/0:23,0:23:9.25:0,9,19	0/0:21,0:21:10.05:0,10,27	0/0:20,0:19:13.24:0,13,41	0/0:26,0:26:15.50:0,15,54	0/0:21,0:21:12.61:0,13,49	0/0:22,0:22:8:0,8,15	0/0:19,0:19:10.54:0,11,39	0/0:29,0:29:20.92:0,21,91	0/1:27,0:27:5.25:5,0,36	0/0:18,0:17:15.72:0,16,64	0/1:23,2:24:6.14:86,0,6	1/1:21,0:20:1.59:27,2,0	0/1:18,0:17:6.84:7,0,25	0/0:26,0:26:8.89:0,9,81	0/0:17,0:16:8.80:0,9,36	0/0:24,0:23:17.80:0,18,79	0/0:21,0:20:13.68:0,14,57	0/1:32,0:31:28.33:28,0,30	0/1:22,0:22:1.46:30,0,1	./.
chr10	82888960	.	AC	A	16824.42	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=3.356;DP=603;FS=26.320;HRun=2;HaplotypeScore=183.7467;InbreedingCoeff=0.9977;MQ=60.35;MQ0=3;MQRankSum=-3.886;QD=30.37;ReadPosRankSum=4.709;VQSLOD=2.1245;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,21:26:57.22:653,57,0	1/1:0,9:9:27.09:345,27,0	0/0:33,0:23:33.65:0,34,596	0/0:15,0:14:22.71:0,23,285	1/1:4,18:21:52.14:566,52,0	1/1:1,19:20:49.97:622,50,0	1/1:6,22:28:66.85:800,67,0	1/1:4,23:24:66.66:828,67,0	1/1:2,21:23:59:737,59,0	1/1:1,20:21:63.17:793,63,0	1/1:4,15:18:48.08:574,48,0	1/1:4,20:24:55.95:653,56,0	1/1:1,20:21:57.18:727,57,0	1/1:1,20:21:62.01:773,62,0	1/1:1,18:19:51.16:654,51,0	1/1:5,23:28:76.93:906,77,0	1/1:3,23:26:59.83:704,60,0	1/1:7,11:17:45.70:495,46,0	1/1:3,21:23:65.96:776,66,0	1/1:4,16:20:54.67:669,55,0	1/1:2,15:16:32.63:336,33,0	1/1:4,22:26:64.49:769,64,0	1/1:2,15:16:40.88:471,41,0	1/1:5,19:24:62.57:713,63,0	1/1:4,17:20:52.89:614,53,0	1/1:3,28:30:86.06:1059,86,0	1/1:6,16:22:45.40:586,45,0	./.
chr10	82889194	.	CCA	C	227.87	PASS	AB=0.937;AC=11;AF=0.196;AN=56;BaseQRankSum=-3.176;DP=532;FS=33.041;HRun=0;HaplotypeScore=161.8640;InbreedingCoeff=0.0043;MQ=71.32;MQ0=22;MQRankSum=-0.184;QD=1.26;ReadPosRankSum=-3.079;VQSLOD=0.5766;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:23.91:0,24,102	0/0:8,0:6:15.10:0,15,156	0/0:39,0:25:67.42:0,67,1071	0/0:46,0:28:80.72:0,81,1300	0/0:14,0:13:20.68:0,21,228	0/0:21,0:18:7.53:0,8,237	0/1:21,5:26:25.75:114,0,26	0/1:16,0:16:18.77:31,0,19	0/0:22,0:18:1.71:0,2,173	0/0:16,0:16:7.70:0,8,265	0/1:10,1:10:7.21:7,0,72	0/0:20,0:19:25.12:0,25,247	0/0:21,0:21:43.95:0,44,440	0/1:21,0:18:0.58:1,0,194	0/0:15,0:14:21.43:0,21,209	0/0:17,0:17:25.95:0,26,245	0/0:21,0:18:17.73:0,18,173	0/0:23,0:21:18.28:0,18,314	1/1:18,1:19:5.94:93,6,0	0/1:4,1:5:2.70:3,0,3	0/1:22,0:20:2.81:3,0,337	0/0:17,0:17:7.38:0,7,173	0/1:9,0:7:9.90:10,0,106	0/1:41,0:39:25.84:26,0,341	0/0:7,0:7:12.88:0,13,107	0/0:18,0:18:14.79:0,15,368	0/1:9,2:11:23.49:71,0,23	0/0:4,0:3:9.03:0,9,104
chr10	82889214	.	C	CACACACACACACACA	6302.09	PASS	AB=0.888;AC=37;AF=0.685;AN=54;BaseQRankSum=-1.655;DP=563;FS=3.909;HRun=0;HaplotypeScore=225.5535;InbreedingCoeff=0.4672;MQ=42.12;MQ0=42;MQRankSum=-5.692;QD=15.00;ReadPosRankSum=1.642;VQSLOD=3.5581;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:12.71:13,0,529	1/1:11,0:8:9.02:125,9,0	./.	0/0:30,0:10:9.03:0,9,114	1/1:14,0:13:5.34:144,5,0	1/1:13,0:20:27.06:698,27,0	0/0:34,0:34:33.37:0,33,791	0/0:24,0:20:40.89:0,41,473	1/1:15,0:12:11.87:323,12,0	1/1:23,0:20:31.26:783,31,0	1/1:12,0:9:4.83:45,5,0	1/1:18,0:18:17.73:369,18,0	1/1:17,0:19:29.99:528,30,0	1/1:16,0:13:17.22:267,17,0	1/1:23,0:22:2.79:127,3,0	1/1:7,14:20:9.03:350,9,0	1/1:23,0:21:8.71:679,9,0	0/1:22,0:21:24.28:407,0,24	0/0:11,0:11:18.02:0,18,242	0/0:8,0:8:12.04:0,12,160	1/1:16,0:14:9.03:148,9,0	1/1:16,0:20:26.63:370,27,0	1/1:11,0:13:12.47:199,12,0	0/1:33,0:33:1.97:18,0,2	0/1:5,8:13:11.09:344,0,11	0/1:20,0:19:99:342,0,123	0/0:17,0:17:39.07:0,39,699	1/1:2,0:1:2.99:23,3,0
chr10	82889218	.	C	CACACACACACA	4741.48	PASS	AB=1.000;AC=25;AF=0.463;AN=54;BaseQRankSum=1.698;DP=589;FS=10.395;HRun=0;HaplotypeScore=193.1893;InbreedingCoeff=-0.0922;MQ=42.26;MQ0=43;MQRankSum=-6.406;QD=13.03;ReadPosRankSum=5.064;VQSLOD=2.6119;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:11.63:0,12,616	1/1:10,0:7:9.03:248,9,0	./.	0/0:34,0:10:9.03:0,9,114	0/1:14,0:12:83.58:111,0,84	0/1:24,0:21:16.13:476,0,16	0/0:31,0:31:56.36:0,56,814	0/0:23,0:19:43.94:0,44,544	0/1:21,0:15:78.55:79,0,187	1/1:18,0:24:63:1336,63,0	1/1:11,0:9:4.83:45,5,0	0/1:23,0:21:57.83:94,0,58	0/1:20,0:19:96.90:310,0,97	0/1:19,0:13:29.26:95,0,29	1/1:9,16:25:2.03:165,2,0	0/1:23,0:21:25.05:250,0,25	0/1:26,0:22:99:336,0,105	0/1:24,0:21:99:163,0,175	0/0:11,0:11:19.88:0,20,255	0/0:10,0:10:12.04:0,12,160	1/1:19,0:16:3.64:77,4,0	0/1:21,0:21:86.70:87,0,133	0/1:16,0:14:97.33:116,0,97	0/0:37,0:34:14.08:0,14,160	0/1:16,0:13:11.16:201,0,11	0/1:18,0:20:99:530,0,107	0/0:19,0:19:45.09:0,45,693	1/1:2,0:1:2.99:23,3,0
chr10	82889247	.	AC	A	254.15	PASS	AB=0.686;AC=2;AF=0.036;AN=56;BaseQRankSum=2.710;DP=575;FS=2.149;HRun=1;HaplotypeScore=122.5547;InbreedingCoeff=-0.0437;MQ=52.19;MQ0=30;MQRankSum=-1.794;QD=8.47;ReadPosRankSum=1.450;VQSLOD=1.2400;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:86.10:0,86,1042	0/0:9,0:8:15.05:0,15,193	0/0:13,0:5:9.28:0,9,81	0/0:21,0:8:14.85:0,15,144	0/0:25,0:23:31.41:0,31,361	0/0:23,0:23:48.09:0,48,576	0/0:18,0:18:33.34:0,33,363	0/0:27,0:24:65.80:0,66,736	0/0:20,0:17:41.88:0,42,521	0/0:34,0:31:85.79:0,86,1018	0/0:14,0:12:18.03:0,18,200	0/0:27,0:25:38.95:0,39,468	0/0:15,0:14:28.47:0,28,353	0/0:21,0:17:12.88:0,13,276	0/0:20,0:19:12.46:0,12,124	0/0:17,0:15:23.97:0,24,314	0/0:28,0:25:57.11:0,57,693	0/0:26,0:23:54.63:0,55,650	0/0:11,0:11:28.69:0,29,305	0/0:13,0:13:21.99:0,22,251	0/0:11,0:9:14.91:0,15,186	0/0:23,0:23:39.01:0,39,465	0/0:19,0:17:26.93:0,27,323	0/0:25,0:23:29.92:0,30,347	0/0:20,0:18:27.07:0,27,330	0/1:14,10:18:99:310,0,184	0/0:18,0:18:15.08:0,15,324	0/1:3,3:2:32.87:33,0,33
chr10	82889248	.	C	CA	332.04	PASS	AB=0.766;AC=2;AF=0.036;AN=56;BaseQRankSum=1.708;DP=576;FS=0.000;HRun=3;HaplotypeScore=129.7012;InbreedingCoeff=-0.0351;MQ=52.51;MQ0=28;MQRankSum=-1.489;QD=10.71;ReadPosRankSum=2.844;VQSLOD=1.5381;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:69.75:0,70,822	0/0:9,0:8:15:0,15,161	0/0:13,0:5:7.74:0,8,75	0/0:22,0:9:14.74:0,15,136	0/0:26,0:24:30.08:0,30,349	0/0:22,0:22:43.33:0,43,469	0/0:17,0:18:41.51:0,42,420	0/0:26,0:23:63.64:0,64,726	0/0:19,0:17:41.68:0,42,474	0/0:35,0:32:80.99:0,81,898	0/0:15,0:13:18.03:0,18,201	0/0:27,0:25:41.95:0,42,494	0/0:14,0:14:24.06:0,24,267	0/0:22,0:18:23.90:0,24,267	0/0:20,0:19:11.74:0,12,91	0/0:17,0:15:24.06:0,24,269	0/0:29,0:26:56.23:0,56,619	0/0:26,0:23:54.07:0,54,612	0/0:10,0:11:27.87:0,28,279	0/0:12,0:12:24.03:0,24,269	0/0:11,0:9:14.90:0,15,167	0/0:23,0:23:39.04:0,39,426	0/0:19,0:17:29.53:0,30,319	0/0:25,0:23:30.56:0,31,356	0/0:20,0:19:27.04:0,27,291	0/1:18,7:19:99:388,0,107	0/0:17,0:18:47.62:0,48,438	0/1:4,2:2:20.07:33,0,20
chr10	82890114	.	AG	A	15546.85	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=11.225;DP=789;FS=13.912;HRun=5;HaplotypeScore=89.3301;InbreedingCoeff=0.9976;MQ=68.29;MQ0=0;MQRankSum=-2.336;QD=30.54;ReadPosRankSum=6.598;VQSLOD=3.5392;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1522	1/1:1,7:8:18.05:204,18,0	0/0:35,1:33:85.38:0,85,1098	0/0:40,0:36:84.15:0,84,1031	1/1:0,27:27:75.21:846,75,0	1/1:4,24:28:66.19:749,66,0	0/0:30,0:30:90.27:0,90,1198	0/0:29,0:29:81.27:0,81,1108	1/1:0,37:37:99:1225,108,0	1/1:2,32:34:96.27:1086,96,0	1/1:0,21:21:63.18:714,63,0	1/1:2,31:33:94.51:1058,95,0	1/1:3,21:24:60.07:680,60,0	1/1:0,29:29:81.23:918,81,0	1/1:0,30:30:84.24:953,84,0	1/1:1,27:28:75.21:851,75,0	1/1:3,47:50:99:1536,137,0	1/1:2,25:27:69.20:782,69,0	0/0:34,0:34:90.30:0,90,1223	0/0:15,0:15:45.14:0,45,599	1/1:3,40:43:99:1259,111,0	1/1:3,17:20:45.13:510,45,0	1/1:1,21:22:57.16:646,57,0	1/1:0,24:24:69.20:783,69,0	1/1:2,22:24:66.19:749,66,0	0/0:26,1:27:44.21:0,44,974	0/0:23,0:23:69.23:0,69,939	0/0:6,0:6:18.06:0,18,246
chr10	82891406	.	T	TA	7590.21	PASS	AB=0.702;AC=35;AF=0.625;AN=56;BaseQRankSum=-10.325;DP=625;FS=15.038;HRun=11;HaplotypeScore=67.3062;InbreedingCoeff=0.7640;MQ=66.25;MQ0=0;MQRankSum=-2.386;QD=18.93;ReadPosRankSum=3.667;VQSLOD=4.6363;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:17:21.52:0,22,283	1/1:1,6:7:15.03:152,15,0	0/0:18,0:15:28.88:0,29,207	0/1:8,1:9:20.55:21,0,50	1/1:7,24:32:32.89:531,33,0	0/1:7,11:18:10.40:269,0,10	0/0:24,1:26:43.24:0,43,499	0/0:32,0:34:64.52:0,65,477	1/1:3,13:16:39.08:396,39,0	1/1:6,18:24:27.51:421,28,0	1/1:3,17:21:50.79:466,51,0	1/1:2,15:17:33.06:335,33,0	1/1:5,22:28:39.72:566,40,0	0/1:5,12:17:4.39:323,0,4	1/1:5,20:25:30.87:495,31,0	1/1:2,21:23:54.11:548,54,0	1/1:4,16:20:6.30:384,6,0	1/1:5,25:31:19.50:546,20,0	0/0:19,1:20:17.38:0,17,318	0/0:37,0:39:99:0,101,766	1/1:4,11:15:12.83:312,13,0	1/1:5,14:19:15.80:337,16,0	1/1:8,19:28:14.15:486,14,0	1/1:3,12:17:35.74:333,36,0	1/1:7,26:34:31.52:668,32,0	0/0:25,1:29:31.69:0,32,404	0/0:34,2:36:28.74:0,29,584	0/0:4,0:5:10.98:0,11,76
chr10	82893828	.	GCGTT	G	915.84	PASS	AB=0.548;AC=3;AF=0.060;AN=50;BaseQRankSum=3.903;DP=556;FS=26.585;HRun=0;HaplotypeScore=86.0735;InbreedingCoeff=0.3754;MQ=35.33;MQ0=128;MQRankSum=-1.027;QD=30.53;ReadPosRankSum=2.477;VQSLOD=1.8024;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:24:27.09:0,27,706	0/0:13,0:13:39.13:0,39,1036	./.	./.	0/0:20,0:20:45.10:0,45,1035	0/0:21,0:20:24.08:0,24,638	0/0:23,0:13:36.12:0,36,955	0/0:17,0:14:39.13:0,39,1019	0/0:24,0:18:14.98:0,15,375	0/0:28,0:27:72.23:0,72,1828	0/0:20,0:20:32.65:0,33,756	0/0:22,0:16:12.03:0,12,250	0/0:15,0:14:24.08:0,24,628	0/0:20,0:15:15.05:0,15,349	0/0:38,0:30:33.11:0,33,853	0/0:19,0:14:27.03:0,27,597	0/0:22,0:12:9.03:0,9,203	0/0:12,0:9:6.02:0,6,133	0/0:17,0:15:42.12:0,42,1059	0/0:18,0:18:51.13:0,51,1250	0/0:18,0:9:9.03:0,9,240	0/0:24,0:23:39.13:0,39,1008	0/0:11,0:11:27.09:0,27,717	./.	0/0:24,0:24:42.11:0,42,862	0/1:4,19:20:22.82:950,0,23	0/0:21,0:19:27.09:0,27,707	1/1:0,7:4:3.01:56,3,0
chr10	82894763	.	GGT	G	3784.58	PASS	AB=0.863;AC=35;AF=0.648;AN=54;BaseQRankSum=4.164;DP=705;FS=0.576;HRun=0;HaplotypeScore=95.0366;InbreedingCoeff=0.3545;MQ=63.94;MQ0=21;MQRankSum=2.415;QD=7.35;ReadPosRankSum=3.723;VQSLOD=2.8587;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:38:40.79:41,0,373	0/1:13,0:13:13.06:13,0,121	0/0:31,0:9:3.01:0,3,42	0/0:45,0:24:0.39:0,0,39	1/1:13,3:16:5.85:47,6,0	1/1:14,8:22:11.86:113,12,0	0/0:22,0:22:14.78:0,15,223	./.	1/1:16,13:29:33.09:362,33,0	0/1:29,0:29:7.70:8,0,194	0/0:12,0:11:6.02:0,6,90	1/1:9,20:30:38.77:390,39,0	0/1:11,7:18:27.59:147,0,28	1/1:16,8:25:29.91:310,30,0	0/0:27,2:29:0.15:0,0,388	1/1:11,5:15:9.02:99,9,0	1/1:23,11:36:43.16:409,43,0	0/1:7,9:17:30.67:256,0,31	1/1:22,2:25:14.71:127,15,0	1/1:10,1:11:3.01:33,3,0	1/1:50,21:69:39.09:428,39,0	1/1:11,6:20:26.57:240,27,0	1/1:7,1:9:5.85:47,6,0	1/1:18,24:45:15.05:563,15,0	1/1:8,0:18:11.27:54,11,0	0/0:26,0:31:51.87:0,52,509	1/1:12,6:18:8.70:99,9,0	0/0:1,0:1:2.97:0,3,20
chr10	82895512	.	CCTCTCTCTCTCTCT	C	878.03	PASS	AB=0.833;AC=26;AF=0.542;AN=48;BaseQRankSum=2.452;DP=320;FS=44.348;HRun=0;HaplotypeScore=101.4259;InbreedingCoeff=0.4437;MQ=82.24;MQ0=19;MQRankSum=-1.193;QD=7.84;ReadPosRankSum=0.497;VQSLOD=-0.1167;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:6.02:0,6,157	0/1:1,0:2:0:0,0,0	0/0:57,0:23:3.37:0,3,68	0/0:70,0:19:13.07:0,13,120	1/1:6,2:7:0.89:2,1,0	1/1:0,2:2:3.01:116,3,0	0/0:4,0:4:9.03:0,9,430	0/0:24,0:24:42.12:0,42,1196	1/1:8,0:9:2.50:84,3,0	1/1:6,0:6:2.96:19,3,0	./.	1/1:8,0:8:2.99:23,3,0	./.	1/1:5,0:5:3.01:100,3,0	./.	1/1:2,3:5:1.77:3,2,0	1/1:17,0:17:6.02:185,6,0	1/1:11,2:12:4.87:142,5,0	0/0:5,0:5:3.89:0,4,29	0/0:5,0:5:9.03:0,9,304	./.	1/1:5,0:5:3:25,3,0	0/0:3,0:5:2.99:0,3,24	0/1:10,0:10:14.53:15,0,49	0/0:4,0:4:3:0,3,25	1/1:11,0:12:6.01:144,6,0	0/0:3,0:3:6.02:0,6,101	1/1:7,0:8:9.03:165,9,0
chr10	82895537	.	CTCTCTCTCTCTCTATA	C	976.35	PASS	AB=1.000;AC=22;AF=0.478;AN=46;BaseQRankSum=2.059;DP=191;FS=44.101;HRun=0;HaplotypeScore=57.5288;InbreedingCoeff=0.3544;MQ=51.31;MQ0=21;MQRankSum=0.592;QD=13.56;ReadPosRankSum=0.673;VQSLOD=-0.2516;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:4:6.02:0,6,107	./.	0/0:19,0:3:3.01:0,3,43	0/0:34,0:4:11.27:0,11,73	1/1:3,0:2:0.47:1,0,0	1/1:3,0:3:3.01:98,3,0	0/0:3,0:3:9.03:0,9,354	0/0:17,0:16:42.04:0,42,1031	1/1:5,0:5:6:126,6,0	0/0:6,0:5:7.70:0,8,70	0/0:4,0:4:3.01:0,3,48	1/1:6,0:6:6.01:73,6,0	./.	1/1:3,0:2:2.03:76,2,0	0/0:5,0:5:0.47:0,0,1	1/1:4,0:4:0.94:3,1,0	1/1:4,11:13:9.01:262,9,0	0/1:12,0:11:3.35:119,0,3	0/1:5,0:4:0.97:21,0,1	0/0:4,0:4:9.03:0,9,229	./.	1/1:1,0:1:1.55:4,2,0	./.	0/1:6,0:6:4.37:62,0,4	./.	1/1:1,0:1:3.01:84,3,0	0/0:2,0:2:5.99:0,6,51	0/1:8,0:5:26.90:184,0,27
chr10	82895583	.	ATATATATG	A	834.18	PASS	AB=1.000;AC=27;AF=0.587;AN=46;BaseQRankSum=-2.523;DP=138;FS=7.336;HRun=0;HaplotypeScore=40.8574;InbreedingCoeff=-0.0657;MQ=47.77;MQ0=10;MQRankSum=1.950;QD=8.78;ReadPosRankSum=-1.483;VQSLOD=-0.1968;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:4:2.99:0,3,23	1/1:5,0:5:11.97:96,12,0	./.	0/0:4,0:1:0:0,0,0	1/1:2,0:2:2.99:23,3,0	1/1:4,0:4:8.99:73,9,0	0/0:1,0:1:3:0,3,25	0/1:4,0:3:10.69:11,0,43	./.	0/1:7,0:6:22.75:23,0,149	0/0:2,0:2:3.01:0,3,70	./.	0/1:3,0:3:28.01:40,0,28	1/1:3,0:3:5.91:49,6,0	0/1:5,0:5:27.77:40,0,28	0/0:3,0:3:2.32:0,2,23	1/1:18,0:16:27.28:215,27,0	0/1:17,0:16:42.23:134,0,42	0/1:4,0:3:17.43:17,0,61	1/1:1,0:1:2.98:21,3,0	./.	0/1:2,0:2:3.95:19,0,4	1/1:4,0:4:5.99:49,6,0	1/1:4,0:4:11.97:95,12,0	./.	0/1:3,0:3:4.51:27,0,5	1/1:1,0:1:2.99:23,3,0	0/1:8,0:7:14.60:15,0,126
chr10	82895585	.	ATATATG	A	1172.94	PASS	AB=1.000;AC=30;AF=0.682;AN=44;BaseQRankSum=-2.987;DP=146;FS=5.782;HRun=0;HaplotypeScore=37.1165;InbreedingCoeff=-0.0116;MQ=48.32;MQ0=9;MQRankSum=2.375;QD=11.61;ReadPosRankSum=-1.475;VQSLOD=0.1855;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:4:2.99:0,3,23	1/1:5,0:5:14.97:121,15,0	./.	./.	1/1:2,0:2:2.99:23,3,0	1/1:4,0:4:8.99:73,9,0	0/0:1,0:1:3:0,3,25	0/1:4,0:3:11.13:14,0,11	./.	0/1:8,0:7:49.36:49,0,69	0/0:2,0:2:3.01:0,3,46	./.	0/1:3,0:3:3.99:41,0,4	1/1:3,0:3:5.91:49,6,0	0/1:5,0:5:3.74:41,0,4	1/1:3,0:3:3:25,3,0	1/1:18,0:16:28.16:238,28,0	1/1:18,0:17:25.65:319,26,0	0/1:5,0:4:29.95:56,0,30	1/1:1,0:1:2.98:21,3,0	./.	0/1:2,0:2:3.95:19,0,4	1/1:5,0:5:5.99:49,6,0	1/1:4,0:4:11.97:95,12,0	./.	0/1:3,0:3:1.42:27,0,1	1/1:1,0:1:2.99:23,3,0	0/1:7,0:7:19.65:20,0,83
chr10	82895589	.	ATGTG	A	568.44	PASS	AB=0.980;AC=21;AF=0.477;AN=44;BaseQRankSum=0.318;DP=157;FS=0.000;HRun=0;HaplotypeScore=38.7530;InbreedingCoeff=0.2969;MQ=47.96;MQ0=10;MQRankSum=0.436;QD=7.11;ReadPosRankSum=0.554;VQSLOD=1.4138;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:7:6.02:0,6,95	0/1:5,0:5:0.06:0,0,0	./.	./.	1/1:2,0:2:3.01:45,3,0	0/1:4,0:4:0.12:0,0,0	0/0:1,0:1:3.01:0,3,50	1/1:2,0:1:3.01:39,3,0	./.	0/1:8,0:8:27.21:27,0,38	0/0:2,0:2:3.01:0,3,44	./.	0/0:3,0:3:2.60:0,3,11	0/1:4,0:4:0.20:0,0,0	0/0:5,0:5:2.50:0,2,10	0/0:3,0:3:0:0,0,1	0/1:18,0:16:0.97:8,0,1	1/1:17,0:17:4.40:160,4,0	1/1:1,4:4:10.85:138,11,0	1/1:2,0:2:6.02:93,6,0	./.	0/0:3,0:3:3.01:0,3,35	0/0:6,0:6:0:0,0,1	0/0:4,0:4:1.12:0,1,3	./.	1/1:1,0:3:6.02:72,6,0	1/1:1,0:1:3.01:47,3,0	1/1:4,1:7:0.42:51,0,0
chr10	82895627	.	G	GTGTA	927.12	PASS	AB=0.789;AC=4;AF=0.071;AN=56;BaseQRankSum=-1.633;DP=301;FS=6.328;HRun=0;HaplotypeScore=53.7168;InbreedingCoeff=0.3021;MQ=68.25;MQ0=6;MQRankSum=-0.121;QD=17.83;ReadPosRankSum=-0.314;VQSLOD=2.1270;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:21.07:0,21,370	0/0:6,0:6:18.06:0,18,317	0/0:20,0:5:3:0,3,29	0/1:34,0:11:10.29:10,0,46	0/0:5,0:5:6.02:0,6,100	0/0:7,0:7:18.06:0,18,317	0/0:6,0:6:18.02:0,18,233	0/0:16,0:16:39.12:0,39,623	0/0:8,0:8:5.98:0,6,106	0/0:12,0:12:21.07:0,21,360	0/0:7,0:7:9.03:0,9,159	0/0:12,0:12:15.05:0,15,265	0/0:4,0:4:12.04:0,12,212	0/0:13,0:13:33.10:0,33,554	0/0:12,0:12:33.10:0,33,548	0/0:7,0:7:18.03:0,18,241	0/0:18,0:18:45.56:0,46,683	0/0:18,0:18:45.07:0,45,730	0/0:12,0:10:24.08:0,24,417	0/0:5,0:5:15.05:0,15,264	0/0:6,0:5:15.04:0,15,236	0/0:6,0:6:12.04:0,12,212	0/0:15,0:15:20.96:0,21,338	0/0:8,0:8:18.06:0,18,317	0/0:10,0:10:6.02:0,6,101	0/1:3,8:11:72.67:641,0,73	0/0:5,0:5:15.03:0,15,235	1/1:1,5:6:15.05:384,15,0
chr10	82895932	.	C	CT	2407.77	PASS	AB=0.923;AC=46;AF=0.821;AN=56;BaseQRankSum=4.813;DP=545;FS=25.148;HRun=14;HaplotypeScore=102.4467;InbreedingCoeff=0.5511;MQ=69.50;MQ0=9;MQRankSum=-6.796;QD=5.40;ReadPosRankSum=-2.352;VQSLOD=-0.0073;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:39:38.65:0,39,334	1/1:4,0:4:2.84:14,3,0	0/0:28,0:21:3.30:0,3,58	0/1:39,0:18:13.58:14,0,15	1/1:18,0:27:22.65:118,23,0	1/1:8,0:18:33.14:170,33,0	0/0:16,1:21:23.21:0,23,247	1/1:20,20:41:6.04:381,6,0	1/1:13,0:18:5.68:29,6,0	1/1:17,0:25:23.10:112,23,0	1/1:5,0:8:15.91:81,16,0	1/1:8,6:16:12.71:69,13,0	1/1:11,0:19:14.55:77,15,0	1/1:5,1:11:5.84:40,6,0	1/1:3,0:8:15.09:73,15,0	1/1:8,0:17:17.04:85,17,0	1/1:10,0:23:6.49:95,6,0	1/1:11,2:20:19.40:104,19,0	1/1:11,7:18:17.98:153,18,0	0/1:9,2:11:0.51:98,0,1	1/1:7,0:13:13.91:65,14,0	1/1:3,0:6:8.64:47,9,0	1/1:9,0:20:26.32:138,26,0	0/0:4,0:9:2.95:0,3,19	1/1:8,0:11:11.23:54,11,0	1/1:8,1:27:27.50:143,28,0	1/1:10,18:30:7.18:315,7,0	1/1:0,1:10:14.36:83,14,0
chr10	82896833	.	A	AG	7016.21	PASS	AB=0.865;AC=38;AF=0.704;AN=54;BaseQRankSum=-7.267;DP=577;FS=18.075;HRun=9;HaplotypeScore=80.6904;InbreedingCoeff=0.8215;MQ=77.28;MQ0=0;MQRankSum=-0.436;QD=17.58;ReadPosRankSum=1.946;VQSLOD=3.8136;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,102,881	0/1:5,2:7:20.35:27,0,20	0/1:18,0:20:1.56:2,0,169	0/0:17,0:17:9.79:0,10,131	1/1:12,10:22:18.05:199,18,0	1/1:5,13:18:7.04:306,7,0	0/0:26,0:26:65.96:0,66,570	0/0:21,1:22:29.91:0,30,259	1/1:10,16:26:39.11:431,39,0	1/1:7,13:20:39.11:431,39,0	1/1:3,8:11:18.05:199,18,0	1/1:9,16:25:30.08:332,30,0	1/1:4,23:27:42.11:464,42,0	1/1:7,16:23:42.05:447,42,0	1/1:3,17:20:45.12:498,45,0	1/1:4,17:21:48.13:531,48,0	1/1:4,21:25:33.91:604,34,0	1/1:7,14:21:45.02:480,45,0	0/0:20,0:21:44:0,44,369	0/0:25,0:25:35.91:0,36,300	1/1:4,25:29:54.15:597,54,0	1/1:2,14:16:24.06:265,24,0	1/1:3,9:12:24.04:265,24,0	1/1:6,16:22:39.11:431,39,0	1/1:3,9:12:18.05:199,18,0	1/1:12,10:22:7.12:306,7,0	0/0:25,0:25:62.94:0,63,538	./.
chr10	82898956	.	A	AC	945.58	PASS	AB=0.629;AC=2;AF=0.036;AN=56;BaseQRankSum=9.076;DP=637;FS=12.196;HRun=0;HaplotypeScore=75.0672;InbreedingCoeff=-0.0179;MQ=67.64;MQ0=1;MQRankSum=-1.190;QD=15.25;ReadPosRankSum=3.123;VQSLOD=4.9274;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1422	0/0:10,0:10:30.08:0,30,388	0/0:25,0:19:45.13:0,45,554	0/0:23,0:22:53.82:0,54,735	0/0:35,0:35:99:0,102,1422	0/0:24,0:24:72.23:0,72,989	0/0:23,0:23:68.02:0,68,896	0/0:22,0:22:66.21:0,66,908	0/0:18,0:18:54.18:0,54,755	0/0:32,0:32:93.31:0,93,1285	0/0:17,0:17:51.11:0,51,674	0/0:12,0:12:36.12:0,36,503	0/0:13,0:13:36.12:0,36,503	0/0:21,0:21:63.21:0,63,880	0/0:19,0:19:54.17:0,54,738	0/0:10,0:10:30.10:0,30,419	0/0:38,0:38:99:0,108,1452	0/0:19,0:19:57.12:0,57,741	0/0:17,0:17:51.16:0,51,696	0/0:21,0:21:63.20:0,63,865	0/0:30,0:30:90.27:0,90,1220	0/0:19,0:19:57.14:0,57,760	0/0:18,0:18:54.16:0,54,718	0/0:22,0:22:66.22:0,66,922	0/0:27,0:27:81.26:0,81,1117	0/1:18,18:36:31.47:559,0,31	0/0:25,0:25:72.24:0,72,1005	0/1:8,18:26:17.30:475,0,17
chr10	82898957	.	A	AAAC	1755.11	PASS	AB=0.622;AC=2;AF=0.036;AN=56;BaseQRankSum=9.135;DP=635;FS=7.822;HRun=0;HaplotypeScore=99.6955;InbreedingCoeff=0.2637;MQ=67.81;MQ0=1;MQRankSum=-0.320;QD=28.77;ReadPosRankSum=2.425;VQSLOD=3.6570;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1552	0/0:10,0:10:27.08:0,27,417	0/0:23,0:18:32.80:0,33,596	0/0:22,0:21:53.72:0,54,721	0/0:35,0:35:99:0,105,1655	0/0:25,0:25:69.24:0,69,1115	0/0:24,0:24:49.77:0,50,984	0/0:24,0:24:66.22:0,66,1051	0/0:18,0:18:54.18:0,54,871	0/0:32,0:32:96.31:0,96,1511	0/0:16,0:16:48.16:0,48,773	0/0:13,0:13:36.12:0,36,585	0/0:13,0:13:36.12:0,36,583	0/0:21,0:21:63.20:0,63,1001	0/0:19,0:19:57.16:0,57,854	0/0:10,0:10:30.10:0,30,487	0/0:37,0:37:99:0,105,1657	0/0:19,0:19:54.18:0,54,852	0/0:17,0:17:45.15:0,45,731	0/0:21,0:21:63.21:0,63,997	0/0:30,0:30:90.26:0,90,1368	0/0:19,0:19:57.19:0,57,901	0/0:17,0:17:51.17:0,51,804	0/0:22,0:22:66.23:0,66,1072	0/0:27,0:27:78.26:0,78,1245	0/1:19,18:37:99:945,0,104	0/0:25,0:25:72.24:0,72,1145	0/1:6,18:24:2.76:899,0,3
chr10	82899324	.	C	CA	4520.75	PASS	AB=0.682;AC=38;AF=0.679;AN=56;BaseQRankSum=-7.153;DP=587;FS=0.419;HRun=13;HaplotypeScore=75.5063;InbreedingCoeff=0.6079;MQ=70.65;MQ0=2;MQRankSum=1.141;QD=10.71;ReadPosRankSum=0.943;VQSLOD=4.4864;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:33:39.45:0,39,408	1/1:3,7:11:12.30:99,12,0	0/1:18,1:12:20.58:21,0,27	0/0:11,0:8:7.92:0,8,46	1/1:13,22:37:2.71:394,3,0	1/1:4,20:24:44.92:406,45,0	0/0:12,2:14:13.29:0,13,184	0/0:30,2:36:34.31:0,34,347	1/1:6,11:17:3.42:166,3,0	0/1:16,20:36:3.80:373,0,4	1/1:5,15:21:25.75:302,26,0	1/1:4,12:16:15.01:139,15,0	1/1:6,5:11:5.96:47,6,0	1/1:1,16:17:18.01:164,18,0	1/1:4,14:18:15.01:136,15,0	1/1:5,9:14:12.01:111,12,0	0/1:3,24:27:4.73:373,0,5	1/1:3,21:24:27.36:375,27,0	0/0:20,1:22:24.69:0,25,304	0/0:24,0:24:52.72:0,53,348	0/1:7,13:20:11.62:119,0,12	1/1:5,13:18:9.40:221,9,0	1/1:8,14:22:24.03:223,24,0	1/1:3,15:18:24.03:223,24,0	1/1:6,8:14:20.96:185,21,0	1/1:11,15:27:41.80:361,42,0	0/0:23,0:23:36.52:0,37,295	1/1:2,9:11:9.01:84,9,0
chr10	82902196	.	C	CCAA	1998.54	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.783;DP=790;FS=0.000;HRun=0;HaplotypeScore=111.4159;InbreedingCoeff=0.9994;MQ=70.12;MQ0=0;MQRankSum=-1.897;QD=60.56;ReadPosRankSum=2.026;VQSLOD=4.9124;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,2125	0/0:12,0:12:36.12:0,36,627	0/0:29,0:25:65.66:0,66,1011	0/0:27,0:26:69.06:0,69,1154	0/0:28,0:28:78.27:0,78,1364	0/0:28,0:28:81.22:0,81,1366	0/0:27,0:27:81.28:0,81,1420	0/0:27,0:27:78.20:0,78,1264	0/0:18,0:18:51.17:0,51,895	0/0:30,0:30:84.27:0,84,1422	0/0:21,0:21:63.22:0,63,1109	0/0:37,0:37:99:0,108,1864	0/0:26,0:26:72.23:0,72,1238	0/0:23,0:23:66.22:0,66,1131	0/0:31,0:31:90.29:0,90,1553	0/0:29,0:29:81.27:0,81,1397	0/0:54,0:53:99:0,159,2710	0/0:39,0:39:99:0,99,1738	0/0:20,0:20:50.84:0,51,823	0/0:30,0:30:84.29:0,84,1472	0/0:44,0:43:99:0,126,2211	0/0:23,0:23:63.22:0,63,1110	0/0:28,0:28:84.29:0,84,1481	0/0:38,0:38:99:0,108,1832	0/0:19,0:19:57.20:0,57,1005	1/1:2,21:23:66.23:1481,66,0	0/0:27,0:27:78.25:0,78,1347	1/1:0,10:10:27.09:639,27,0
chr10	82902412	.	AAGAG	A	17515.35	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=13.693;DP=633;FS=4.790;HRun=0;HaplotypeScore=114.6843;InbreedingCoeff=0.9932;MQ=79.66;MQ0=0;MQRankSum=-2.212;QD=44.34;ReadPosRankSum=7.189;VQSLOD=5.0522;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.21:0,69,1695	1/1:0,6:6:12.04:205,12,0	0/0:22,0:22:51.17:0,51,1215	0/0:22,0:22:43.61:0,44,880	1/1:2,23:25:66.15:1143,66,0	1/1:1,27:28:72.25:1324,72,0	0/0:13,0:13:39.12:0,39,946	0/0:30,0:30:81.26:0,81,1912	1/1:2,12:14:36.12:662,36,0	1/1:1,24:25:72.23:1273,72,0	1/1:0,16:16:48.12:826,48,0	1/1:2,25:27:56.93:1047,57,0	1/1:2,20:22:54.18:993,54,0	1/1:1,17:18:39.13:698,39,0	1/1:2,25:27:63.22:1159,63,0	1/1:1,24:25:60.21:1103,60,0	1/1:2,30:32:72.25:1318,72,0	1/1:1,18:19:54.18:992,54,0	0/0:26,0:26:72.24:0,72,1741	0/0:30,0:30:90.31:0,90,2354	1/1:2,20:22:54.19:993,54,0	1/1:3,18:21:51.17:915,51,0	1/1:0,25:25:60.21:1098,60,0	1/1:1,21:22:48.16:882,48,0	1/1:0,21:21:48.16:883,48,0	0/0:24,1:25:15.34:0,15,1637	0/0:20,0:19:57.20:0,57,1491	0/0:24,0:24:72.25:0,72,1894
chr10	82902566	.	A	AG	20577.14	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-10.829;DP=648;FS=1.839;HRun=0;HaplotypeScore=58.9712;InbreedingCoeff=0.9599;MQ=62.77;MQ0=0;MQRankSum=-1.457;QD=44.35;ReadPosRankSum=4.251;VQSLOD=5.0552;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.26:0,78,1090	1/1:0,17:17:51.17:813,51,0	0/0:4,0:4:8.92:0,9,100	0/0:5,0:4:2.04:0,2,6	1/1:0,36:37:99:1614,102,0	1/1:0,27:27:75.26:1198,75,0	0/0:13,0:13:39.12:0,39,528	0/0:38,0:38:99:0,111,1552	1/1:1,11:12:33.11:526,33,0	1/1:0,21:21:63.21:1007,63,0	1/1:0,26:26:78.27:1245,78,0	1/1:0,29:29:81.28:1292,81,0	1/1:2,20:22:57.19:911,57,0	1/1:2,18:20:54.18:863,54,0	1/1:1,34:35:93.32:1487,93,0	1/1:1,28:29:81.28:1294,81,0	1/1:3,14:17:48.15:741,48,0	1/1:0,21:21:60.20:959,60,0	0/0:30,0:30:87.28:0,87,1202	0/0:33,0:33:99:0,99,1367	1/1:0,16:16:45.15:719,45,0	1/1:1,26:27:69.24:1102,69,0	1/1:0,24:24:66.12:1054,66,0	1/1:1,23:24:60.20:946,60,0	1/1:0,21:21:60.20:959,60,0	1/1:0,25:25:75.24:1176,75,0	0/0:35,0:35:99:0,102,1394	1/1:0,14:14:42.14:670,42,0
chr10	82902821	.	T	TGCACCTTCCAA	47561.72	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-2.972;DP=590;FS=6.389;HRun=0;HaplotypeScore=182.8958;InbreedingCoeff=0.9982;MQ=74.11;MQ0=0;MQRankSum=-17.429;QD=120.72;ReadPosRankSum=0.782;VQSLOD=5.0798;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,154,5290	1/1:3,3:8:21.05:894,21,0	0/0:22,0:21:56.28:0,56,1418	0/0:17,0:17:36.09:0,36,963	1/1:6,18:27:78.27:3668,78,0	1/1:5,8:16:42.14:2163,42,0	0/0:25,0:25:69.24:0,69,2362	0/0:20,0:20:51.18:0,51,1764	1/1:7,8:16:42.14:1914,42,0	1/1:3,11:16:48.16:2476,48,0	1/1:10,5:16:39.12:1407,39,0	1/1:14,11:26:75.26:3622,75,0	1/1:11,13:26:72.23:3490,72,0	1/1:11,12:26:69.20:3253,69,0	1/1:10,17:29:78.23:3833,78,0	1/1:9,12:24:60.21:2857,60,0	1/1:11,9:21:57.20:3027,57,0	1/1:11,7:20:42.14:2275,42,0	0/0:25,0:25:75.24:0,75,2338	0/0:11,0:11:30.10:0,30,1058	1/1:6,4:13:27.05:929,27,0	1/1:13,5:21:42.10:1241,42,0	1/1:11,6:20:45.74:1781,46,0	1/1:6,13:22:51.65:2574,52,0	1/1:2,7:12:27.09:1447,27,0	1/1:19,9:28:75.24:3568,75,0	0/0:21,0:21:60.21:0,60,1943	1/1:2,5:7:21.07:1142,21,0
chr10	82902856	.	A	AT	254.92	PASS	AB=0.735;AC=1;AF=0.018;AN=56;BaseQRankSum=3.085;DP=541;FS=13.595;HRun=0;HaplotypeScore=136.1090;InbreedingCoeff=-0.0222;MQ=81.15;MQ0=0;MQRankSum=-3.281;QD=10.20;ReadPosRankSum=-1.783;VQSLOD=3.2462;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,1831	0/0:6,0:6:18.06:0,18,251	0/0:24,0:23:63.19:0,63,834	0/0:20,0:20:54.13:0,54,695	0/0:24,0:24:42.14:0,42,586	0/0:14,0:14:36.05:0,36,479	0/0:23,0:23:69.23:0,69,964	0/0:25,0:25:66.22:0,66,921	0/0:15,0:15:42.13:0,42,585	0/0:21,0:21:63.21:0,63,868	0/0:14,0:14:36.12:0,36,502	0/0:18,0:18:51.17:0,51,711	0/0:16,0:16:44.74:0,45,627	0/0:17,0:17:45.15:0,45,627	0/0:20,0:20:48.03:0,48,623	0/0:18,0:18:51.13:0,51,690	0/0:25,0:25:66.12:0,66,876	0/0:20,0:20:51.17:0,51,713	0/0:21,0:21:63.21:0,63,881	0/0:11,0:11:33.11:0,33,461	0/0:22,0:22:57.08:0,57,749	0/0:17,0:17:45.15:0,45,628	0/0:23,0:23:47.80:0,48,638	0/0:18,0:18:33.11:0,33,461	0/0:16,0:16:45.08:0,45,598	0/1:16,9:25:99:329,0,550	0/0:21,0:21:63.21:0,63,879	0/0:2,0:2:6.02:0,6,84
chr10	82903468	.	ATCAG	A	1017.61	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.506;DP=834;FS=0.742;HRun=0;HaplotypeScore=204.9493;InbreedingCoeff=0.9747;MQ=69.42;MQ0=3;MQRankSum=-0.056;QD=32.83;ReadPosRankSum=-0.845;VQSLOD=3.5531;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,135,3199	0/0:7,0:7:18.06:0,18,345	0/0:24,0:18:18.12:0,18,320	0/0:33,0:31:24.43:0,24,339	0/0:23,0:23:50.67:0,51,652	0/0:30,0:30:63.13:0,63,1001	0/0:36,0:36:99:0,99,2163	0/0:24,0:24:60.15:0,60,1122	0/0:22,0:21:45.09:0,45,709	0/0:27,0:27:72.20:0,72,1407	0/0:21,0:21:38.07:0,38,539	0/0:26,0:26:51.15:0,51,926	0/0:28,0:27:57.09:0,57,956	0/0:35,0:34:86.27:0,86,1543	0/0:41,0:40:84.29:0,84,1683	0/0:33,0:32:75.20:0,75,1340	0/0:31,0:31:63.11:0,63,1010	0/0:32,0:32:81.11:0,81,1304	0/0:29,0:29:72.06:0,72,1275	0/0:16,0:16:42.13:0,42,994	0/0:68,0:68:99:0,156,2648	0/0:25,0:25:56.73:0,57,835	0/0:39,0:39:68.91:0,69,988	0/0:37,0:37:83.31:0,83,1575	0/0:34,0:33:68.25:0,68,1256	1/1:4,20:24:60.16:940,60,0	0/0:30,0:30:87.24:0,87,2058	1/1:2,5:7:12.04:194,12,0
chr10	82903479	.	A	AGTCT	22526.36	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-16.479;DP=863;FS=1.971;HRun=0;HaplotypeScore=128.2807;InbreedingCoeff=0.9899;MQ=68.74;MQ0=3;MQRankSum=0.872;QD=37.86;ReadPosRankSum=7.973;VQSLOD=4.2961;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,135,2105	1/1:1,6:7:18.06:446,18,0	0/0:19,0:15:14.98:0,15,166	0/0:32,0:31:17.29:0,17,226	1/1:7,14:23:27.09:650,27,0	1/1:6,22:28:45.15:1115,45,0	0/0:34,0:34:84.24:0,84,1327	0/0:27,0:27:60.14:0,60,794	1/1:6,19:25:30.10:744,30,0	1/1:6,22:28:66.16:1368,66,0	1/1:9,13:22:15.05:372,15,0	1/1:2,24:28:45.15:1116,45,0	1/1:4,24:30:42.12:1041,42,0	1/1:7,31:39:47.24:1614,47,0	1/1:5,40:44:75.73:1860,76,0	1/1:5,30:34:60.21:1488,60,0	1/1:8,23:32:42.14:1042,42,0	1/1:10,24:35:51.18:1264,51,0	0/0:30,0:30:53.97:0,54,689	0/0:17,0:17:39.10:0,39,603	1/1:12,56:70:99:2976,120,0	1/1:4,19:25:37.06:895,37,0	1/1:11,26:38:38.80:966,39,0	1/1:0,43:44:81.28:2009,81,0	1/1:1,35:37:63.22:1561,63,0	0/0:21,0:20:54.10:0,54,554	0/0:33,0:33:81.24:0,81,1284	0/0:6,0:6:14.96:0,15,139
chr10	82903916	.	C	CTT	5003.06	PASS	AB=0.740;AC=49;AF=0.875;AN=56;BaseQRankSum=-2.804;DP=529;FS=19.063;HRun=13;HaplotypeScore=88.6892;InbreedingCoeff=0.0914;MQ=65.83;MQ0=6;MQRankSum=-0.372;QD=10.17;ReadPosRankSum=0.679;VQSLOD=1.8201;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:28:20.63:174,21,0	1/1:0,5:5:6.02:82,6,0	0/0:35,0:19:22.54:0,23,165	0/1:35,0:11:6.10:6,0,19	1/1:8,4:19:32.46:327,32,0	1/1:4,12:22:3.13:292,3,0	0/1:7,0:15:30.93:31,0,32	1/1:18,0:43:71.04:367,71,0	1/1:0,8:8:12.04:163,12,0	1/1:11,13:28:15.53:378,16,0	1/1:3,10:15:20.44:197,20,0	1/1:5,8:13:3.01:41,3,0	1/1:10,1:13:22.05:194,22,0	1/1:8,1:9:22.53:230,23,0	1/1:5,12:18:2.49:276,2,0	1/1:0,8:8:6.02:82,6,0	1/1:24,5:30:49.34:520,49,0	1/1:7,16:25:30.47:472,30,0	1/1:14,1:22:2.77:129,3,0	0/1:5,0:14:15.64:42,0,16	1/1:4,7:12:12.03:151,12,0	1/1:4,5:9:8.52:90,9,0	1/1:2,8:12:2.94:151,3,0	1/1:5,8:14:14.54:172,15,0	1/1:10,1:14:23.46:216,23,0	0/1:14,0:19:30.65:100,0,31	0/1:13,1:27:23.82:68,0,24	1/1:1,0:9:14.97:52,15,0
chr10	82904370	.	A	AG	100.30	PASS	AB=0.929;AC=5;AF=0.089;AN=56;BaseQRankSum=6.219;DP=447;FS=5.301;HRun=0;HaplotypeScore=51.0242;InbreedingCoeff=0.3740;MQ=39.38;MQ0=61;MQRankSum=0.439;QD=3.24;ReadPosRankSum=1.263;VQSLOD=2.2080;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:28:68.51:0,69,511	0/0:1,0:1:2.90:0,3,16	0/0:24,0:2:2.90:0,3,16	0/0:19,0:3:2.84:0,3,15	0/1:12,0:12:10.84:11,0,29	0/0:18,0:16:29.81:0,30,189	0/0:16,0:15:41.56:0,42,284	0/0:33,0:29:61.43:0,61,442	0/0:11,0:11:8.93:0,9,70	0/0:9,0:8:2.66:0,3,31	0/0:13,0:11:2.62:0,3,20	0/0:8,0:4:2.97:0,3,20	0/0:14,0:11:9.38:0,9,50	0/0:13,0:11:15.55:0,16,84	0/0:19,0:16:11.39:0,11,76	0/0:14,0:13:11.80:0,12,80	0/0:29,0:24:31.96:0,32,194	0/0:24,0:17:30.72:0,31,215	0/0:25,0:19:56.62:0,57,430	0/0:14,0:13:35.60:0,36,244	0/0:11,0:10:7.07:0,7,59	0/0:10,0:9:12.33:0,12,80	0/0:12,0:8:8.61:0,9,51	0/0:14,0:11:11.81:0,12,62	0/0:11,0:8:0.92:0,1,41	1/1:3,10:11:12.02:143,12,0	0/0:21,0:17:47.67:0,48,353	1/1:3,2:3:8.84:60,9,0
chr10	82905436	.	G	GCACA	2226.15	PASS	AB=0.795;AC=31;AF=0.620;AN=50;BaseQRankSum=-2.311;DP=548;FS=0.000;HRun=0;HaplotypeScore=117.6822;InbreedingCoeff=0.4451;MQ=68.73;MQ0=11;MQRankSum=-0.130;QD=6.31;ReadPosRankSum=-2.092;VQSLOD=2.2129;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:26:3.01:0,3,44	1/1:6,0:9:8.06:110,8,0	./.	./.	./.	1/1:10,5:15:6.02:141,6,0	0/0:23,0:24:2.87:0,3,28	0/1:22,0:23:0:0,0,0	1/1:14,7:24:9.03:203,9,0	1/1:18,0:16:15.04:223,15,0	0/1:10,1:15:0:0,0,0	1/1:12,4:20:9.02:211,9,0	1/1:11,0:20:11.98:177,12,0	1/1:11,0:17:4.56:56,5,0	1/1:21,0:22:11.98:118,12,0	0/1:13,4:18:39.79:65,0,40	0/1:13,4:22:99:189,0,113	1/1:18,0:24:9.64:96,10,0	0/0:17,0:19:9.01:0,9,84	0/0:15,0:18:9.02:0,9,102	1/1:36,0:36:9.02:118,9,0	1/1:10,2:12:3.01:70,3,0	1/1:12,3:15:3.48:71,3,0	1/1:22,6:27:24.06:475,24,0	0/1:7,1:11:40.26:64,0,40	0/0:11,0:14:9.01:0,9,84	0/0:10,0:18:20.21:0,20,194	0/0:6,0:9:9.01:0,9,84
chr10	82906522	.	TTTTTG	T	2895.91	PASS	AB=0.980;AC=28;AF=0.500;AN=56;BaseQRankSum=5.877;DP=523;FS=11.183;HRun=0;HaplotypeScore=114.1334;InbreedingCoeff=0.1671;MQ=55.48;MQ0=38;MQRankSum=-3.987;QD=8.64;ReadPosRankSum=9.268;VQSLOD=0.1249;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:28:39.30:0,39,506	1/1:11,0:9:2.39:121,2,0	0/0:28,0:8:2.98:0,3,8	0/0:25,0:8:5.14:0,5,23	0/1:17,1:17:0.79:80,0,1	0/1:20,0:18:0.72:186,0,1	0/0:14,0:13:20.56:0,21,361	0/0:34,0:29:2.46:0,2,399	0/1:12,0:12:1.30:96,0,1	0/1:21,0:19:2.53:249,0,3	1/1:14,0:10:14.93:119,15,0	1/1:17,0:13:5.54:197,6,0	1/1:15,0:14:5.99:165,6,0	1/1:11,0:10:17.93:180,18,0	0/1:12,2:14:19.68:197,0,20	0/1:14,0:11:1.33:99,0,1	0/1:28,2:25:20.08:310,0,20	0/1:20,0:19:24.82:171,0,25	0/0:17,0:15:37.05:0,37,424	0/0:17,0:17:32.33:0,32,454	0/1:20,0:17:23.88:24,0,41	0/1:11,0:11:15.69:93,0,16	1/1:18,0:17:9.37:221,9,0	1/1:11,0:11:11.93:92,12,0	1/1:16,1:18:22.40:196,22,0	0/1:29,0:27:32.61:232,0,33	0/0:22,0:22:39.90:0,40,635	0/1:8,0:7:7.17:39,0,7
chr10	82907928	.	ATGTGTGTGTGTGTGTGTGTG	A	4721.38	PASS	AB=0.895;AC=40;AF=0.741;AN=54;BaseQRankSum=5.782;DP=645;FS=22.131;HRun=0;HaplotypeScore=269.9922;InbreedingCoeff=0.2540;MQ=54.13;MQ0=56;MQRankSum=-2.991;QD=9.22;ReadPosRankSum=0.096;VQSLOD=2.2759;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:37:5.14:145,5,0	1/1:7,2:7:3.01:158,3,0	./.	0/0:33,0:17:0.47:0,0,1	1/1:18,0:17:3.47:26,3,0	1/1:13,0:17:3.01:99,3,0	0/0:21,0:19:3.01:0,3,48	0/1:23,0:22:0:0,0,0	1/1:21,5:25:15.05:792,15,0	1/1:19,3:21:5.98:47,6,0	1/1:10,2:11:3.01:158,3,0	0/1:17,0:21:23.88:286,0,24	1/1:27,0:28:3:115,3,0	1/1:20,4:25:8.81:437,9,0	1/1:21,5:22:6.01:317,6,0	1/1:25,7:26:8.28:474,8,0	1/1:20,7:23:8.87:475,9,0	0/1:18,3:19:27.22:152,0,27	0/1:14,0:13:2.24:133,0,2	1/1:19,0:22:3.01:140,3,0	1/1:40,0:33:0.47:1,0,0	1/1:16,6:20:2.76:16,3,0	1/1:18,0:16:2.79:13,3,0	0/0:19,0:18:0:0,0,0	1/1:19,3:21:6.02:316,6,0	0/0:19,0:18:27.09:0,27,706	1/1:17,0:17:9.92:421,10,0	0/0:8,0:4:6.02:0,6,161
chr10	82909175	.	GGAGAGAGAGAGAGAGAGAGAGAGAGA	G	9316.07	PASS	AC=30;AF=0.556;AN=54;BaseQRankSum=8.101;DP=642;FS=41.366;HRun=0;HaplotypeScore=333.1851;InbreedingCoeff=0.7592;MQ=57.38;MQ0=27;MQRankSum=-4.659;QD=27.48;ReadPosRankSum=4.712;VQSLOD=1.9849;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:40:45.10:0,45,2800	1/1:3,10:13:18.02:1035,18,0	0/0:24,0:14:2.98:0,3,22	0/0:39,0:19:5.50:0,6,43	1/1:11,9:20:2.21:57,2,0	1/1:18,0:18:6.02:123,6,0	0/0:29,0:33:52.74:0,53,3845	0/0:22,0:21:27.09:0,27,1515	1/1:10,16:26:15.05:1015,15,0	1/1:15,10:24:20.72:586,21,0	1/1:8,0:8:2.63:181,3,0	1/1:9,15:24:9.03:609,9,0	1/1:18,16:34:18.06:1218,18,0	1/1:7,14:20:15.52:1016,16,0	1/1:12,16:30:27.98:1662,28,0	1/1:23,16:39:15.93:1017,16,0	1/1:19,0:19:0.46:1,0,0	0/0:8,0:8:3.01:0,3,31	0/0:19,0:21:51.17:0,51,2806	0/0:11,0:15:18.06:0,18,1423	1/1:27,0:26:6:53,6,0	1/1:11,10:19:9.62:337,10,0	./.	0/0:27,0:27:1.41:0,1,3	1/1:4,8:11:6.02:406,6,0	0/0:23,0:26:57.20:0,57,3286	0/0:16,0:16:20.59:0,21,1680	0/0:19,0:14:30.06:0,30,1859
chr10	82911082	.	C	CTGAATGAATGAATGAA	3390.22	PASS	AB=0.818;AC=3;AF=0.054;AN=56;BaseQRankSum=-0.484;DP=703;FS=4.552;HRun=0;HaplotypeScore=291.6440;InbreedingCoeff=0.7905;MQ=75.65;MQ0=0;MQRankSum=-6.596;QD=77.05;ReadPosRankSum=-2.472;VQSLOD=2.4014;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:90.31:0,90,3587	0/0:15,0:15:39.12:0,39,1539	0/0:26,0:26:33.11:0,33,1022	0/0:21,0:21:21.07:0,21,633	0/0:22,0:22:57.17:0,57,2226	0/0:25,0:25:54.16:0,54,2107	0/0:26,0:26:51.16:0,51,1810	0/0:43,0:43:72.24:0,72,2524	0/0:16,0:16:24.08:0,24,943	0/0:25,0:25:57.20:0,57,2279	0/0:19,0:19:30.10:0,30,1211	0/0:25,0:25:60.21:0,60,2519	0/0:18,0:18:36.11:0,36,1409	0/0:14,0:14:36.12:0,36,1432	0/0:40,0:40:90.31:0,90,3636	0/0:26,0:26:66.23:0,66,2739	0/0:28,0:28:57.20:0,57,2481	0/0:24,0:24:60.21:0,60,2378	0/0:21,0:21:24.08:0,24,831	0/0:30,0:30:63.22:0,63,2620	0/0:31,0:31:78.27:0,78,3201	0/0:27,0:27:69.24:0,69,2648	0/0:13,0:13:24.08:0,24,1043	0/0:23,0:23:66.23:0,66,2925	0/0:26,0:26:63.22:0,63,2721	1/1:26,8:35:51.18:3113,51,0	0/0:28,0:28:66.23:0,66,2739	0/1:7,1:9:2.56:278,0,3
chr10	82913054	.	AAC	A	990.25	PASS	AB=0.879;AC=28;AF=0.538;AN=52;BaseQRankSum=5.826;DP=602;FS=3.372;HRun=0;HaplotypeScore=110.2252;InbreedingCoeff=-0.1602;MQ=58.84;MQ0=12;MQRankSum=-0.908;QD=2.32;ReadPosRankSum=-0.225;VQSLOD=1.8520;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:38:5.95:0,6,48	0/0:10,0:9:14.77:0,15,167	./.	./.	0/1:22,0:21:10.39:10,0,227	0/1:12,1:14:22.62:23,0,197	0/0:16,0:18:20.89:0,21,185	1/1:27,0:27:2.98:22,3,0	0/1:11,3:14:30.69:31,0,44	0/1:18,0:18:6:6,0,65	0/1:11,2:12:47.77:48,0,124	0/1:17,4:21:71.87:72,0,190	0/1:21,0:21:26.50:27,0,224	0/1:14,4:18:14.49:14,0,180	0/1:22,7:28:28.98:29,0,384	1/1:8,0:31:28.67:141,29,0	0/0:22,0:31:30.88:0,31,317	0/1:16,3:19:88.91:89,0,201	1/1:8,0:8:2.84:14,3,0	1/1:5,0:13:5.68:29,6,0	0/0:21,0:30:9:0,9,79	0/1:13,4:18:39.37:40,0,39	0/1:10,1:11:48.53:49,0,114	0/1:39,8:47:99:159,0,536	0/1:24,3:29:54.24:54,0,339	1/1:8,0:23:25.57:125,26,0	1/1:6,1:22:27.15:144,27,0	1/1:2,0:7:7.45:32,7,0
chr10	82913836	.	TGA	T	977.10	PASS	AB=0.887;AC=26;AF=0.520;AN=50;BaseQRankSum=0.979;DP=355;FS=8.783;HRun=0;HaplotypeScore=105.2824;InbreedingCoeff=0.5730;MQ=51.69;MQ0=4;MQRankSum=-1.027;QD=5.75;ReadPosRankSum=-0.062;VQSLOD=2.3990;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:12:0,12,127	1/1:5,1:6:8.85:73,9,0	./.	./.	1/1:15,1:17:2.81:14,3,0	0/0:22,0:22:9.45:0,9,80	0/1:15,1:16:23.76:24,0,80	./.	1/1:9,2:10:11.99:112,12,0	1/1:11,1:13:8.69:61,9,0	1/1:5,1:7:6:57,6,0	0/1:12,3:15:6.95:131,0,7	1/1:11,3:14:9.02:98,9,0	1/1:7,4:11:12.03:131,12,0	1/1:10,2:13:5.85:47,6,0	1/1:15,3:19:23.71:215,24,0	0/0:11,0:11:9.03:0,9,132	1/1:7,2:9:5.95:43,6,0	0/0:10,0:10:5.95:0,6,57	0/0:14,0:14:2.99:0,3,27	0/0:9,0:9:0:0,0,0	1/1:7,3:9:9.02:98,9,0	0/0:8,0:8:6.01:0,6,70	0/0:7,0:7:3.01:0,3,45	1/1:6,1:8:5.85:47,6,0	0/0:20,0:20:22.21:0,22,230	0/0:16,0:18:20.98:0,21,190	0/0:10,0:9:11.91:0,12,98
chr10	82913951	.	G	GT	11119.38	PASS	AC=48;AF=0.923;AN=52;BaseQRankSum=0.440;DP=275;FS=0.000;HRun=0;HaplotypeScore=182.2299;InbreedingCoeff=0.7897;MQ=49.62;MQ0=0;MQRankSum=-2.465;QD=42.28;ReadPosRankSum=2.575;VQSLOD=4.0881;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:54.18:859,54,0	1/1:0,3:3:9.03:143,9,0	0/0:7,0:4:8.77:0,9,78	0/0:4,0:4:2.85:0,3,30	1/1:2,18:20:57.89:841,58,0	1/1:1,12:13:36.12:573,36,0	1/1:3,5:8:15.05:238,15,0	1/1:1,11:11:27.09:431,27,0	1/1:1,7:8:21.03:307,21,0	1/1:1,7:8:24.04:355,24,0	1/1:0,8:8:20.66:331,21,0	1/1:1,12:13:36.12:573,36,0	1/1:0,13:13:39.13:619,39,0	1/1:0,8:8:24.08:379,24,0	1/1:1,17:18:51.17:805,51,0	1/1:0,11:11:33.11:526,33,0	1/1:1,8:9:24.04:354,24,0	1/1:0,4:4:12.04:191,12,0	1/1:2,6:8:24.05:356,24,0	1/1:0,12:12:30.10:477,30,0	1/1:0,8:7:15.05:235,15,0	1/1:1,10:11:24.04:382,24,0	1/1:0,6:6:18.06:287,18,0	./.	1/1:0,12:12:32.53:525,33,0	1/1:0,10:10:30.10:479,30,0	1/1:1,17:18:54.18:854,54,0	./.
chr10	82913964	.	T	TC	4838.89	PASS	AB=1.000;AC=50;AF=0.962;AN=52;BaseQRankSum=1.863;DP=218;FS=0.000;HRun=0;HaplotypeScore=176.4624;InbreedingCoeff=0.2983;MQ=61.93;MQ0=0;MQRankSum=-4.689;QD=22.20;ReadPosRankSum=3.199;VQSLOD=5.1077;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:57.04:531,57,0	1/1:0,2:2:6.01:57,6,0	0/1:11,0:6:0.53:1,0,90	0/1:6,0:7:6.83:7,0,41	1/1:0,14:14:29.95:260,30,0	1/1:3,11:14:33.05:316,33,0	1/1:0,3:3:9.01:83,9,0	1/1:0,6:6:18.03:178,18,0	1/1:0,6:6:18.01:166,18,0	1/1:0,5:5:15.02:146,15,0	1/1:0,6:6:14.94:124,15,0	1/1:0,7:7:21.02:194,21,0	1/1:0,14:14:42:378,42,0	1/1:1,6:7:18.01:163,18,0	1/1:0,13:13:38.99:349,39,0	1/1:0,6:6:17.94:159,18,0	1/1:1,7:8:18.02:167,18,0	1/1:0,4:4:9.01:87,9,0	1/1:0,5:5:15.03:150,15,0	1/1:1,10:11:27.01:245,27,0	1/1:0,5:5:6.01:55,6,0	1/1:1,9:10:24.03:226,24,0	1/1:1,4:5:6:54,6,0	./.	1/1:0,8:8:24.03:226,24,0	1/1:1,6:7:15.03:147,15,0	1/1:0,13:13:39.04:368,39,0	./.
chr10	82913965	.	T	TAC	7799.07	PASS	AB=0.875;AC=51;AF=0.944;AN=54;BaseQRankSum=-0.075;DP=245;FS=1.521;HRun=0;HaplotypeScore=169.0987;InbreedingCoeff=0.3872;MQ=59.58;MQ0=0;MQRankSum=-4.729;QD=33.76;ReadPosRankSum=2.032;VQSLOD=6.1524;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:25:63.18:830,63,0	1/1:0,2:2:6.02:83,6,0	0/0:12,0:7:8.73:0,9,132	0/1:5,1:7:46.75:58,0,47	1/1:1,13:15:30.06:370,30,0	1/1:5,11:16:45.06:568,45,0	1/1:2,3:5:11.71:159,12,0	1/1:3,6:9:27.09:383,27,0	1/1:0,6:6:18.06:243,18,0	1/1:1,5:6:18.06:248,18,0	1/1:0,5:6:15.02:179,15,0	1/1:1,7:8:24.08:321,24,0	1/1:1,13:15:45.13:574,45,0	1/1:2,6:8:24.07:314,24,0	1/1:0,12:13:39.13:508,39,0	1/1:1,6:7:21.05:272,21,0	1/1:1,7:8:21.50:265,21,0	1/1:1,4:5:12.04:168,12,0	1/1:1,5:6:18.06:253,18,0	1/1:2,10:12:27.09:361,27,0	1/1:0,5:5:6.01:81,6,0	1/1:1,9:10:24.05:306,24,0	1/1:1,4:5:5.70:80,6,0	./.	1/1:1,8:9:24.08:329,24,0	1/1:2,5:8:21.06:279,21,0	1/1:0,12:13:39.13:527,39,0	1/1:2,0:2:3.01:41,3,0
chr10	82915984	.	CGTGTGT	C	1728.82	PASS	AB=0.744;AC=36;AF=0.720;AN=50;BaseQRankSum=2.795;DP=556;FS=0.805;HRun=0;HaplotypeScore=122.0494;InbreedingCoeff=0.5359;MQ=57.08;MQ0=23;MQRankSum=-1.537;QD=4.66;ReadPosRankSum=0.674;VQSLOD=2.3699;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,9:31:3.01:60,3,0	1/1:10,0:11:5.51:101,6,0	./.	./.	./.	1/1:11,4:16:6.90:105,7,0	1/1:25,0:28:9.02:111,9,0	0/0:23,0:22:14.03:0,14,160	1/1:12,8:19:6.02:120,6,0	1/1:9,9:18:14.92:286,15,0	1/1:13,0:13:3.01:59,3,0	1/1:17,5:23:9.03:144,9,0	1/1:6,0:8:10.59:165,11,0	1/1:9,0:12:2.81:42,3,0	1/1:8,6:14:3.01:60,3,0	0/1:16,0:23:25.05:25,0,337	0/0:18,0:28:9.66:0,10,103	1/1:15,12:27:9.03:181,9,0	0/0:18,0:17:15.05:0,15,321	0/0:18,0:16:9.03:0,9,243	1/1:29,0:28:6.02:120,6,0	0/1:9,6:15:0:0,0,0	1/1:15,6:20:3:31,3,0	1/1:20,8:28:2.79:60,3,0	0/0:10,0:11:14.09:0,14,154	1/1:15,0:15:17.98:197,18,0	0/0:25,0:26:36.12:0,36,954	1/1:12,0:10:2.99:23,3,0
chr10	82916024	.	TGTGTGTGTGTGC	T	808.19	PASS	AB=0.988;AC=7;AF=0.125;AN=56;BaseQRankSum=5.000;DP=493;FS=1.922;HRun=0;HaplotypeScore=155.0178;InbreedingCoeff=0.4180;MQ=56.61;MQ0=24;MQRankSum=-3.410;QD=10.23;ReadPosRankSum=-0.123;VQSLOD=2.7379;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:32.09:0,32,397	0/0:10,0:10:17.23:0,17,159	0/0:4,0:2:3.31:0,3,15	0/0:10,0:7:3.76:0,4,50	0/0:13,0:13:17.99:0,18,226	0/0:14,0:13:21.07:0,21,339	0/1:25,1:24:99:185,0,249	0/0:22,0:17:47.17:0,47,658	0/0:19,0:18:20.25:0,20,347	0/0:20,0:19:46.44:0,46,718	0/0:14,0:14:26.83:0,27,282	0/1:17,0:15:11.18:11,0,317	0/1:14,0:14:5.98:6,0,179	0/0:15,0:15:25.81:0,26,261	0/0:15,0:15:26.93:0,27,341	0/0:23,0:22:60.12:0,60,2050	0/0:29,0:29:56.02:0,56,1323	0/0:32,0:31:47.71:0,48,510	0/0:10,0:9:22.58:0,23,605	0/0:15,0:13:28.23:0,28,852	0/0:32,0:31:50.93:0,51,683	0/0:14,0:12:9.45:0,9,97	0/0:17,0:17:17.76:0,18,379	0/0:28,0:25:24.88:0,25,305	0/0:14,0:14:33.05:0,33,900	1/1:15,3:17:38.26:665,38,0	0/0:18,0:17:45.10:0,45,1976	1/1:4,0:2:6:71,6,0
chr10	82917264	.	TG	T	5495.83	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=1.727;DP=676;FS=6.587;HRun=4;HaplotypeScore=87.9393;InbreedingCoeff=0.9967;MQ=76.59;MQ0=0;MQRankSum=-3.685;QD=31.40;ReadPosRankSum=-2.900;VQSLOD=3.7737;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:39:90.28:1080,90,0	0/0:16,0:16:48.16:0,48,671	0/0:15,0:15:35.30:0,35,532	0/0:26,0:26:69.17:0,69,910	0/0:22,0:22:60.20:0,60,840	0/0:19,0:19:54.12:0,54,717	1/1:1,38:39:99:1260,105,0	1/1:2,22:24:63.06:711,63,0	0/0:18,0:18:45.14:0,45,612	0/0:22,0:22:60.19:0,60,826	0/0:22,0:22:63.21:0,63,880	0/0:25,0:25:72.24:0,72,1006	0/0:22,0:22:63.21:0,63,882	0/0:25,0:25:72.24:0,72,1008	0/0:25,0:25:72.24:0,72,998	0/0:28,0:28:84.24:0,84,1152	0/0:39,0:39:99:0,108,1512	0/0:22,0:22:63.20:0,63,865	1/1:2,19:21:57.15:671,57,0	1/1:0,28:28:81.22:960,81,0	0/0:33,0:33:99:0,99,1333	0/0:18,0:18:54.17:0,54,739	0/0:13,0:13:39.12:0,39,527	0/0:32,0:32:81.27:0,81,1133	0/0:16,0:16:45.12:0,45,596	0/0:38,0:37:99:0,114,1594	1/1:2,22:24:69.19:815,69,0	0/0:5,0:5:15.05:0,15,210
chr10	82917331	.	G	GT	98.49	PASS	AB=0.817;AC=3;AF=0.054;AN=56;BaseQRankSum=1.367;DP=411;FS=0.000;HRun=0;HaplotypeScore=104.5723;InbreedingCoeff=0.1722;MQ=73.46;MQ0=5;MQRankSum=-3.579;QD=2.40;ReadPosRankSum=-1.896;VQSLOD=2.5939;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:15:35.03:0,35,435	0/0:10,0:10:29.98:0,30,308	0/1:18,0:12:0.32:0,0,246	0/0:20,0:17:24.34:0,24,541	0/0:25,0:25:21.89:0,22,433	0/0:14,0:14:41.97:0,42,445	0/0:16,0:16:11.50:0,12,149	0/0:20,0:18:23.22:0,23,306	0/0:14,0:13:19.39:0,19,286	0/0:20,0:19:47.94:0,48,510	0/0:14,0:14:21.44:0,21,311	0/0:20,0:20:52.62:0,53,524	0/0:12,0:11:29.80:0,30,308	0/0:14,0:14:35.50:0,36,388	0/0:15,0:14:41.85:0,42,428	0/0:16,0:16:41.33:0,41,439	0/0:16,0:15:43.78:0,44,476	0/0:10,0:10:29.93:0,30,310	0/0:9,0:7:21.07:0,21,277	0/0:12,0:12:34.26:0,34,389	0/0:12,0:12:6.71:0,7,239	0/0:13,0:13:31.46:0,31,309	0/0:17,0:17:30.32:0,30,392	0/0:10,0:10:20.72:0,21,252	0/0:11,0:10:26.96:0,27,281	0/1:7,8:15:2.79:130,0,3	0/0:13,0:11:26.82:0,27,332	0/1:6,2:7:26.55:57,0,27
chr10	82917332	.	G	GTTTTT	15198.58	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-0.385;DP=570;FS=3.303;HRun=14;HaplotypeScore=203.4542;InbreedingCoeff=0.2400;MQ=63.57;MQ0=8;MQRankSum=-2.901;QD=27.53;ReadPosRankSum=-4.089;VQSLOD=0.4609;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:27,1:28:53.86:964,54,0	1/1:11,1:14:18.06:353,18,0	0/0:17,0:12:4.71:0,5,42	0/1:20,0:17:34.52:37,0,35	1/1:23,2:30:52.91:748,53,0	1/1:12,1:17:38.95:605,39,0	1/1:22,0:22:27.69:482,28,0	1/1:30,0:29:48.39:866,48,0	1/1:20,4:23:48.16:957,48,0	1/1:23,2:26:52.03:987,52,0	1/1:14,0:17:21.68:358,22,0	1/1:24,2:26:54.10:852,54,0	1/1:22,0:21:39.13:786,39,0	1/1:19,0:18:32.92:477,33,0	1/1:25,0:25:54.18:1028,54,0	1/1:19,3:22:36.97:733,37,0	1/1:22,2:24:42.08:753,42,0	1/1:13,1:16:29.77:556,30,0	1/1:19,0:17:33.05:629,33,0	1/1:13,0:14:23.99:405,24,0	1/1:11,1:12:16.87:307,17,0	1/1:15,4:19:37.66:706,38,0	1/1:17,2:20:32.79:565,33,0	1/1:14,0:16:12.87:221,13,0	1/1:15,0:15:26.37:423,26,0	0/1:20,0:20:41.98:159,0,42	1/1:13,0:11:14.85:199,15,0	0/1:10,0:8:40.16:40,0,109
chr10	82917358	.	TTC	T	3935	PASS	AB=0.673;AC=32;AF=0.571;AN=56;BaseQRankSum=0.547;DP=417;FS=52.610;HRun=0;HaplotypeScore=83.3367;InbreedingCoeff=0.4636;MQ=38.30;MQ0=26;MQRankSum=-1.797;QD=13.76;ReadPosRankSum=6.497;VQSLOD=1.4309;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:24:21.49:0,21,345	1/1:1,7:8:11.95:171,12,0	0/0:6,0:3:0:0,0,0	0/0:5,0:2:2.04:0,2,6	1/1:6,12:17:13.99:304,14,0	1/1:2,10:10:18.02:267,18,0	0/0:21,0:19:44.82:0,45,604	0/0:28,0:23:60.34:0,60,809	1/1:5,15:18:11.24:272,11,0	1/1:1,13:14:36.08:472,36,0	1/1:5,14:19:23.59:286,24,0	0/1:13,9:21:74.92:223,0,75	1/1:5,8:13:3.70:162,4,0	0/1:6,8:13:29.96:184,0,30	0/1:4,13:17:3.99:271,0,4	1/1:3,11:13:5.52:128,6,0	1/1:9,13:21:5.13:292,5,0	0/1:8,8:13:6.41:120,0,6	0/0:17,0:15:36.59:0,37,665	0/0:10,0:10:20.94:0,21,316	0/1:3,8:9:5.57:38,0,6	1/1:5,7:11:11.29:176,11,0	1/1:1,11:12:8.89:133,9,0	1/1:2,9:10:12.20:178,12,0	1/1:0,9:9:14.79:222,15,0	0/1:19,3:19:35.54:36,0,448	0/0:8,0:6:14.89:0,15,149	0/0:8,0:6:18.04:0,18,193
chr10	82917359	.	T	TC	557.85	PASS	AB=1.000;AC=5;AF=0.093;AN=54;BaseQRankSum=-2.586;DP=351;FS=2.138;HRun=2;HaplotypeScore=84.6606;InbreedingCoeff=0.5463;MQ=37.69;MQ0=26;MQRankSum=0.642;QD=15.94;ReadPosRankSum=0.825;VQSLOD=3.7234;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:18:17.97:0,18,201	0/0:7,0:7:9.50:0,10,36	./.	0/0:4,0:1:2.37:0,2,8	0/0:14,0:14:21.98:0,22,98	0/0:11,0:9:13.47:0,13,44	0/0:21,0:19:44.58:0,45,406	0/0:25,0:20:44.95:0,45,475	0/0:16,0:16:11.10:0,11,36	0/0:13,0:14:29.12:0,29,121	0/0:15,0:18:20.80:0,21,96	0/0:10,0:9:13.14:0,13,43	0/0:9,0:9:8.88:0,9,29	0/0:8,0:7:8.82:0,9,29	0/0:14,0:14:13.32:0,13,44	0/0:12,0:11:6.66:0,7,22	0/0:19,0:18:16.79:0,17,54	0/0:12,0:10:6.66:0,7,22	0/0:13,0:13:36.10:0,36,432	0/0:10,0:10:20.66:0,21,199	0/0:10,0:8:2.22:0,2,7	0/0:9,0:10:8.72:0,9,29	0/0:11,0:12:6.66:0,7,22	0/0:9,0:8:9.03:0,9,30	0/0:9,0:9:11.10:0,11,37	1/1:10,12:19:26.20:441,26,0	0/1:4,0:4:4.57:5,0,48	1/1:4,5:7:18.05:232,18,0
chr10	82917912	.	C	CG	602.25	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.070;DP=650;FS=3.150;HRun=4;HaplotypeScore=63.8486;InbreedingCoeff=0.9995;MQ=84.71;MQ0=0;MQRankSum=-1.755;QD=24.09;ReadPosRankSum=-0.648;VQSLOD=2.4685;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.16:0,81,875	0/0:17,0:17:48.13:0,48,536	0/0:21,0:21:41.97:0,42,414	0/0:28,0:28:61.63:0,62,599	0/0:33,0:33:90.26:0,90,1019	0/0:18,0:18:54.14:0,54,601	0/0:25,0:25:60.12:0,60,644	0/0:41,0:41:99:0,105,1137	0/0:27,0:27:78.17:0,78,851	0/0:20,0:20:60.17:0,60,680	0/0:23,0:23:52.71:0,53,575	0/0:13,0:13:36.09:0,36,399	0/0:18,0:18:48.13:0,48,544	0/0:14,0:14:42.04:0,42,459	0/0:24,0:24:63.13:0,63,679	0/0:16,0:16:42.10:0,42,467	0/0:33,0:33:90.22:0,90,992	0/0:16,0:16:39.05:0,39,416	0/0:28,0:28:75:0,75,806	0/0:33,0:33:93.24:0,93,1038	0/0:24,0:24:46.11:0,46,571	0/0:25,0:25:68.19:0,68,737	1/1:5,20:25:51.17:697,51,0	0/0:17,0:17:42.12:0,42,476	0/0:19,0:19:54.15:0,54,608	0/0:29,0:29:84.20:0,84,919	0/0:21,0:21:60.16:0,60,672	0/0:13,0:13:36.10:0,36,408
chr10	82919030	.	CTCTG	C	3958.39	PASS	AB=0.972;AC=24;AF=0.429;AN=56;BaseQRankSum=-5.765;DP=758;FS=2.329;HRun=0;HaplotypeScore=177.1369;InbreedingCoeff=0.1441;MQ=67.39;MQ0=10;MQRankSum=-3.047;QD=7.67;ReadPosRankSum=-3.186;VQSLOD=2.3286;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:51,3:54:14.64:740,15,0	0/1:12,1:13:3.37:11,0,3	0/0:32,0:24:62.21:0,62,825	0/0:36,0:26:47.71:0,48,852	0/1:21,0:20:5.03:15,0,5	0/0:19,1:20:11.52:0,12,33	0/1:20,1:21:18.67:296,0,19	1/1:23,4:27:44.48:702,44,0	0/0:28,0:24:11:0,11,26	1/1:20,0:19:6.49:117,6,0	0/0:16,0:16:7.48:0,7,17	0/0:26,0:26:23.67:0,24,53	0/1:33,1:33:10.99:106,0,11	0/1:23,1:24:5.12:107,0,5	0/1:42,4:46:10.87:332,0,11	0/0:42,1:42:19.74:0,20,45	0/1:27,0:27:28.71:53,0,29	0/1:22,0:21:13.80:70,0,14	1/1:18,1:19:34.92:422,35,0	1/1:16,2:18:25.23:244,25,0	0/1:56,2:58:21.07:104,0,21	0/1:22,0:22:8.17:12,0,8	0/0:10,0:10:2.49:0,2,6	0/0:23,0:23:10.85:0,11,25	0/1:24,1:25:9.83:90,0,10	0/1:32,0:32:86.44:86,0,1076	1/1:29,4:33:18.73:449,19,0	0/0:8,0:8:2.99:0,3,259
chr10	82919032	.	CTG	C	11880.05	PASS	AB=0.524;AC=47;AF=0.839;AN=56;BaseQRankSum=-2.337;DP=751;FS=2.084;HRun=0;HaplotypeScore=129.9103;InbreedingCoeff=0.8249;MQ=65.69;MQ0=10;MQRankSum=-1.525;QD=18.33;ReadPosRankSum=5.968;VQSLOD=4.7812;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:48,4:52:86.60:788,87,0	1/1:1,11:12:15:202,15,0	0/0:30,0:23:52.35:0,52,735	0/0:35,0:24:47.74:0,48,636	1/1:0,21:20:24.08:360,24,0	1/1:1,20:21:27.09:402,27,0	1/1:19,1:20:7.83:217,8,0	1/1:25,2:27:19.76:485,20,0	1/1:3,25:24:30.10:458,30,0	1/1:0,20:19:54.08:710,54,0	1/1:1,14:15:18.06:275,18,0	1/1:1,27:28:57.19:870,57,0	1/1:3,31:33:45.09:650,45,0	1/1:1,23:24:36.08:514,36,0	1/1:7,39:46:82.69:1250,83,0	1/1:2,40:41:48.16:733,48,0	1/1:3,26:29:12.98:335,13,0	0/1:2,20:21:9.21:368,0,9	1/1:19,0:19:38.03:320,38,0	1/1:18,0:18:25.50:189,26,0	1/1:2,54:56:66.14:957,66,0	1/1:0,22:22:23.93:367,24,0	1/1:1,9:10:5.87:91,6,0	1/1:0,23:23:27.09:412,27,0	1/1:1,25:26:36.10:523,36,0	0/0:30,0:30:53.29:0,53,794	1/1:31,2:33:46.97:402,47,0	0/0:8,0:8:23.97:0,24,247
chr10	82919034	.	G	GTC	1338.40	PASS	AB=0.989;AC=10;AF=0.179;AN=56;BaseQRankSum=-6.362;DP=747;FS=19.190;HRun=0;HaplotypeScore=169.4120;InbreedingCoeff=0.1543;MQ=64.99;MQ0=11;MQRankSum=-0.130;QD=6.97;ReadPosRankSum=-7.933;VQSLOD=0.0876;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:72.80:0,73,489	0/0:12,0:12:10.71:0,11,45	0/0:31,0:23:29.89:0,30,262	0/0:35,0:24:19.55:0,20,181	0/1:22,0:21:3.14:3,0,50	0/0:21,0:21:18.45:0,18,77	0/1:20,1:21:22.63:23,0,116	0/1:27,0:27:61.13:65,0,61	0/0:26,0:22:24:0,24,100	0/1:20,0:19:41.55:42,0,59	0/0:14,0:14:14.28:0,14,57	0/0:27,0:27:49.10:0,49,202	0/0:34,0:33:37.56:0,38,154	0/0:25,0:25:0.54:0,1,69	0/1:45,1:46:33.51:34,0,162	0/0:41,0:40:41.06:0,41,168	0/0:29,0:29:19.86:0,20,90	0/0:22,0:21:21.37:0,21,86	0/1:17,0:17:1.20:1,0,122	0/0:19,0:19:10.92:0,11,140	0/0:56,0:56:54.72:0,55,219	0/0:22,0:22:17.77:0,18,71	0/0:9,0:9:5.21:0,5,22	0/0:23,0:23:22.31:0,22,91	0/0:27,0:27:10.23:0,10,90	1/1:1,30:31:81.13:1078,81,0	0/0:32,1:33:0.26:0,0,330	1/1:3,5:8:1.96:230,2,0
chr10	82919365	.	CT	C	14079.77	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=11.032;DP=597;FS=6.172;HRun=2;HaplotypeScore=64.5958;InbreedingCoeff=0.9708;MQ=79.80;MQ0=0;MQRankSum=-5.147;QD=35.47;ReadPosRankSum=6.968;VQSLOD=4.5827;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1775	1/1:0,14:14:36.12:467,36,0	0/0:28,0:28:78.15:0,78,1072	0/0:20,0:20:54.15:0,54,778	1/1:0,15:15:42.14:545,42,0	1/1:0,22:22:63.15:797,63,0	0/0:21,0:21:60.19:0,60,879	0/0:26,0:26:75.20:0,75,1063	1/1:0,16:16:48.16:623,48,0	1/1:0,21:20:60.15:735,60,0	1/1:0,13:13:39.13:506,39,0	1/1:0,20:20:57.19:740,57,0	1/1:0,25:25:69.22:895,69,0	1/1:0,18:18:51.17:662,51,0	1/1:0,22:22:63.20:818,63,0	1/1:0,28:28:78.25:1012,78,0	1/1:0,22:22:57.19:739,57,0	1/1:2,23:25:69.22:895,69,0	0/0:17,0:16:48.14:0,48,681	0/0:19,0:19:54.11:0,54,726	1/1:1,40:41:99:1324,102,0	1/1:1,17:18:51.17:662,51,0	1/1:0,10:10:24.08:311,24,0	1/1:0,27:27:72.23:934,72,0	1/1:4,18:22:63.17:775,63,0	1/1:5,12:17:51.13:602,51,0	0/0:28,0:28:84.24:0,84,1181	1/1:0,1:1:3.01:39,3,0
chr10	82919456	.	C	CA	11884.65	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=5.886;DP=573;FS=2.651;HRun=7;HaplotypeScore=137.4286;InbreedingCoeff=0.9224;MQ=76.20;MQ0=0;MQRankSum=-5.304;QD=25.56;ReadPosRankSum=4.793;VQSLOD=3.1961;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1243	1/1:1,6:7:18.05:200,18,0	0/0:32,0:26:34.18:0,34,424	0/0:20,0:15:1.81:0,2,135	1/1:3,19:22:42.31:480,42,0	1/1:3,20:23:56.35:615,56,0	0/0:16,0:16:45.11:0,45,500	1/1:4,19:22:58.66:612,59,0	1/1:3,10:13:33.95:365,34,0	1/1:8,15:23:18.96:429,19,0	1/1:3,11:14:33.14:364,33,0	1/1:3,11:14:33.09:361,33,0	1/1:6,19:25:60.41:703,60,0	1/1:9,12:21:46.43:516,46,0	1/1:2,15:17:40.61:472,41,0	1/1:5,23:28:78.17:841,78,0	1/1:8,29:37:91.48:989,91,0	1/1:4,22:26:70.90:773,71,0	1/1:3,4:7:12.49:120,12,0	1/1:8,9:17:23.84:294,24,0	1/1:4,12:16:33.59:390,34,0	1/1:4,16:20:46.20:555,46,0	1/1:4,16:20:53.51:601,54,0	1/1:7,11:18:33.30:363,33,0	1/1:4,22:26:61.67:691,62,0	1/1:3,18:21:56.30:619,56,0	1/1:8,10:18:34.95:390,35,0	1/1:0,9:9:14.98:145,15,0
chr10	82920410	.	CCTT	C	17450.47	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=12.375;DP=662;FS=10.541;HRun=0;HaplotypeScore=106.7392;InbreedingCoeff=0.9811;MQ=83.01;MQ0=0;MQRankSum=-4.319;QD=38.61;ReadPosRankSum=6.239;VQSLOD=5.5532;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,2813	1/1:1,13:14:39.13:636,39,0	0/0:19,0:19:45.15:0,45,966	0/0:22,0:22:30.70:0,31,1019	1/1:2,20:22:44.28:693,44,0	1/1:1,22:23:60.20:972,60,0	0/0:29,0:29:81.28:0,81,1779	0/0:26,0:26:75.25:0,75,1645	1/1:1,23:24:57.19:936,57,0	1/1:1,22:23:63.20:1002,63,0	1/1:1,12:13:33.11:534,33,0	1/1:2,21:23:57.19:907,57,0	1/1:0,24:24:60.20:986,60,0	1/1:0,27:27:75.25:1222,75,0	1/1:2,16:18:42.14:684,42,0	1/1:1,12:13:36.12:599,36,0	1/1:3,28:31:60.21:999,60,0	1/1:1,24:25:60.21:1000,60,0	0/0:18,0:18:48.16:0,48,996	0/0:27,0:27:78.24:0,78,1678	1/1:4,33:37:73.46:1190,73,0	1/1:1,20:21:48.16:786,48,0	1/1:1,16:17:24.08:400,24,0	1/1:1,34:35:87.30:1432,87,0	1/1:0,29:29:69.15:1106,69,0	1/1:3,28:31:19.22:1266,19,0	0/0:24,0:24:69.24:0,69,1530	1/1:0,2:2:6.02:100,6,0
chr10	82920411	.	CTT	C	3837.17	PASS	AB=0.986;AC=34;AF=0.607;AN=56;BaseQRankSum=18.759;DP=656;FS=2.166;HRun=2;HaplotypeScore=140.8871;InbreedingCoeff=0.5779;MQ=84.32;MQ0=0;MQRankSum=-4.197;QD=8.57;ReadPosRankSum=8.973;VQSLOD=0.0569;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,2615	1/1:14,0:14:17.61:137,18,0	0/0:19,0:19:51.15:0,51,937	0/0:24,0:24:63.42:0,63,1154	0/1:21,1:22:29.62:134,0,30	1/1:22,0:23:51.31:232,51,0	0/0:28,0:28:84.27:0,84,1656	0/0:25,0:25:75.26:0,75,1509	1/1:24,0:24:32.96:211,33,0	1/1:23,0:23:32.70:260,33,0	1/1:12,1:13:28.12:133,28,0	0/1:22,1:23:3.86:156,0,4	1/1:24,0:24:36.73:225,37,0	1/1:27,0:27:65.29:297,65,0	0/1:18,0:18:8.88:124,0,9	1/1:13,0:13:11.87:129,12,0	1/1:30,1:31:12.66:210,13,0	1/1:24,0:24:55.96:256,56,0	0/0:18,0:18:51.17:0,51,977	0/0:26,0:26:78.27:0,78,1555	0/1:37,0:37:28.77:198,0,29	1/1:20,1:21:26.13:176,26,0	0/1:16,0:16:10.43:74,0,10	1/1:34,0:34:61.94:339,62,0	1/1:29,0:29:39.68:237,40,0	0/1:30,0:30:4.58:285,0,5	0/0:23,0:23:69.24:0,69,1400	1/1:2,0:2:5.60:26,6,0
chr10	82924858	.	CA	C	7063.40	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=9.990;DP=579;FS=16.276;HRun=1;HaplotypeScore=429.3748;InbreedingCoeff=0.0820;MQ=34.85;MQ0=0;MQRankSum=-2.677;QD=12.24;ReadPosRankSum=9.587;VQSLOD=2.0800;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:41:30.98:421,31,0	1/1:13,0:13:35.38:224,35,0	1/1:2,0:2:5.75:46,6,0	0/0:2,0:2:2.84:0,3,14	1/1:26,1:27:38.40:259,38,0	0/1:28,0:28:10.92:340,0,11	1/1:19,0:19:10.35:227,10,0	1/1:24,0:24:30.10:326,30,0	1/1:32,1:33:42.39:477,42,0	0/1:30,0:30:1.88:366,0,2	1/1:22,0:22:38.10:253,38,0	1/1:30,0:30:35.71:412,36,0	1/1:31,0:31:20.59:430,21,0	1/1:28,1:29:15.64:349,16,0	1/1:21,0:21:14.73:212,15,0	1/1:24,0:24:28.21:334,28,0	0/1:18,0:17:29.29:103,0,29	1/1:15,0:15:40.70:235,41,0	1/1:11,0:11:25.43:150,25,0	1/1:22,0:22:32.28:288,32,0	0/1:18,0:18:8.06:125,0,8	0/1:14,0:14:8.45:105,0,8	1/1:21,2:23:38.29:264,38,0	1/1:17,0:17:29.43:193,29,0	1/1:13,0:13:2.26:166,2,0	1/1:26,0:26:67.21:397,67,0	1/1:21,0:21:33.47:290,33,0	1/1:4,0:4:11.77:73,12,0
chr10	82924859	.	AC	A	15612.20	PASS	AC=54;AF=0.964;AN=56;BaseQRankSum=1.426;DP=575;FS=0.000;HRun=3;HaplotypeScore=399.3022;InbreedingCoeff=0.6434;MQ=34.65;MQ0=0;MQRankSum=-1.732;QD=27.20;ReadPosRankSum=1.571;VQSLOD=2.0654;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,40:41:78.23:944,78,0	1/1:0,13:13:36.11:445,36,0	1/1:1,1:2:6.01:65,6,0	0/0:1,0:1:2.37:0,2,8	1/1:1,26:27:39.12:482,39,0	1/1:0,28:28:66.21:816,66,0	1/1:2,17:19:42.13:520,42,0	1/1:2,22:24:66.21:818,66,0	1/1:4,29:33:81.25:988,81,0	1/1:4,26:30:78.24:966,78,0	1/1:1,21:22:39.11:471,39,0	1/1:1,29:30:75.18:890,75,0	1/1:3,28:31:84.21:996,84,0	1/1:5,24:29:63.19:757,63,0	1/1:2,19:21:42.12:498,42,0	1/1:1,23:24:63.19:757,63,0	1/1:2,15:16:24.05:278,24,0	1/1:0,14:14:42.13:515,42,0	1/1:1,10:11:30.07:356,30,0	1/1:2,19:21:48.15:594,48,0	1/1:3,15:18:27.07:316,27,0	1/1:3,11:14:21.06:252,21,0	1/1:4,19:23:39.12:473,39,0	1/1:1,16:17:30.09:364,30,0	1/1:1,12:13:33.10:400,33,0	1/1:1,25:26:69.22:850,69,0	1/1:1,20:21:54.13:651,54,0	1/1:0,4:4:12.04:149,12,0
chr10	82925161	.	CT	C	21995.57	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.840;DP=662;FS=10.736;HRun=2;HaplotypeScore=74.7989;InbreedingCoeff=0.9976;MQ=81.00;MQ0=0;MQRankSum=-10.069;QD=35.31;ReadPosRankSum=5.268;VQSLOD=4.6250;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:93.30:1207,93,0	1/1:0,17:17:48.16:621,48,0	0/0:23,0:23:66.21:0,66,957	0/0:16,0:16:42.14:0,42,610	1/1:0,27:27:81.26:1049,81,0	1/1:2,17:19:42.14:545,42,0	1/1:0,23:23:66.21:857,66,0	1/1:0,34:34:99:1309,102,0	1/1:0,27:27:78.25:1011,78,0	1/1:0,29:29:87.28:1128,87,0	1/1:0,10:10:30.10:389,30,0	1/1:1,22:23:63.20:818,63,0	1/1:0,27:26:63.20:817,63,0	1/1:1,25:26:60.19:776,60,0	1/1:0,27:27:72.23:934,72,0	1/1:0,23:23:60.20:779,60,0	1/1:0,31:31:87.28:1130,87,0	1/1:0,23:23:60.20:779,60,0	1/1:2,14:16:42.14:545,42,0	1/1:0,23:23:66.21:857,66,0	1/1:0,30:30:78.25:1013,78,0	1/1:0,17:17:48.16:623,48,0	1/1:0,17:17:48.16:623,48,0	1/1:0,34:33:90.29:1168,90,0	1/1:0,19:19:57.19:740,57,0	1/1:0,25:25:75.22:954,75,0	1/1:0,32:32:81.26:1051,81,0	1/1:2,8:10:21.07:273,21,0
chr10	82928025	.	T	TA	15653.72	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-15.941;DP=723;FS=31.747;HRun=6;HaplotypeScore=62.6488;InbreedingCoeff=0.9957;MQ=78.60;MQ0=1;MQRankSum=-1.736;QD=31.24;ReadPosRankSum=5.090;VQSLOD=2.8232;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,102,1040	1/1:4,9:13:24.08:302,24,0	0/0:16,0:16:18.42:0,18,307	0/0:17,0:17:36.07:0,36,366	1/1:2,25:27:72.23:906,72,0	1/1:4,34:37:90.29:1132,90,0	0/0:22,0:22:66.15:0,66,673	0/0:48,0:48:99:0,123,1251	1/1:3,18:21:48.15:604,48,0	1/1:3,22:25:66.18:804,66,0	1/1:2,25:27:72.19:888,72,0	1/1:3,25:28:72.23:905,72,0	1/1:5,28:33:75.07:940,75,0	1/1:1,18:19:45.14:566,45,0	1/1:4,35:39:96.31:1208,96,0	1/1:3,20:23:57.18:717,57,0	1/1:3,27:30:78.25:981,78,0	1/1:3,17:20:51.16:633,51,0	0/0:21,0:20:54.11:0,54,546	0/0:30,0:30:81.18:0,81,826	1/1:1,17:18:51.16:642,51,0	1/1:1,22:23:60.19:755,60,0	1/1:2,25:27:72.23:906,72,0	1/1:2,24:26:63.20:793,63,0	1/1:6,21:27:66.21:820,66,0	1/1:5,25:30:78.23:964,78,0	0/0:29,0:29:84.17:0,84,849	1/1:0,6:6:15.05:189,15,0
chr10	82928740	.	C	CTTCTCT	2001.70	PASS	AB=0.946;AC=42;AF=0.750;AN=56;BaseQRankSum=3.754;DP=367;FS=6.362;HRun=0;HaplotypeScore=126.7855;InbreedingCoeff=0.0826;MQ=44.18;MQ0=12;MQRankSum=-3.327;QD=6.81;ReadPosRankSum=-1.681;VQSLOD=1.9236;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:1.71:0,2,117	1/1:0,0:4:6.42:98,6,0	0/0:25,0:14:36.12:0,36,761	0/0:26,0:16:24.08:0,24,521	1/1:10,1:10:6.87:43,7,0	1/1:2,12:16:2.93:18,3,0	0/1:20,0:19:59.26:59,0,131	0/1:21,0:15:22.04:22,0,113	1/1:11,0:11:11.27:120,11,0	1/1:7,0:7:8.34:121,8,0	1/1:6,0:6:7.99:55,8,0	1/1:17,0:19:20.01:155,20,0	1/1:6,1:8:17.68:271,18,0	1/1:9,0:11:3.81:40,4,0	1/1:17,0:17:0.83:200,1,0	0/1:3,5:12:10.45:20,0,10	1/1:10,0:10:17.62:112,18,0	0/1:6,0:5:12.98:39,0,13	0/1:15,0:15:69.12:69,0,106	0/1:13,0:13:26.86:27,0,67	1/1:12,0:10:11.82:76,12,0	1/1:6,0:8:2.77:83,3,0	1/1:12,0:11:15.15:97,15,0	1/1:7,0:9:0.31:1,0,0	1/1:10,0:10:20.82:154,21,0	1/1:13,0:10:4.12:160,4,0	0/1:13,0:13:26.35:41,0,26	0/1:9,0:8:0.34:75,0,0
chr10	82928768	.	T	TCTCTCT	1418.81	PASS	AB=1.000;AC=44;AF=0.917;AN=48;DP=339;FS=0.000;HRun=0;HaplotypeScore=107.5055;InbreedingCoeff=0.3209;MQ=37.37;MQ0=23;QD=4.73;VQSLOD=1.7734;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:13:3.48:47,3,0	1/1:4,0:4:6:82,6,0	./.	0/1:12,0:6:0:0,0,0	1/1:9,0:9:2.68:23,3,0	0/1:14,0:14:0:0,0,0	1/1:17,0:16:5.97:126,6,0	1/1:22,0:15:11.92:90,12,0	1/1:11,0:11:5.99:60,6,0	1/1:10,0:8:8.98:72,9,0	1/1:13,0:12:0.47:1,0,0	1/1:19,0:19:11.75:111,12,0	1/1:13,0:12:12.45:190,12,0	0/1:11,0:11:0:0,0,0	1/1:22,0:20:15.45:170,15,0	1/1:8,0:8:0.47:1,0,0	1/1:12,0:12:8.82:61,9,0	./.	1/1:14,0:13:16.80:194,17,0	1/1:8,6:15:4.26:61,4,0	./.	1/1:10,0:10:3:26,3,0	1/1:9,0:8:0.47:1,0,0	0/1:11,0:11:0.35:0,0,0	./.	1/1:13,0:9:9.85:102,10,0	1/1:11,0:11:5.99:50,6,0	1/1:6,0:6:5.09:23,5,0
chr10	82929011	.	GAAGACCA	G	21121.93	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=15.501;DP=578;FS=0.000;HRun=0;HaplotypeScore=154.5359;InbreedingCoeff=0.9863;MQ=81.85;MQ0=0;MQRankSum=-18.462;QD=60.01;ReadPosRankSum=3.759;VQSLOD=4.9842;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,168,6414	1/1:0,5:5:12.04:310,12,0	0/0:25,0:25:75.18:0,75,2434	0/0:20,0:21:57.66:0,58,2002	1/1:1,11:12:21.07:538,21,0	1/1:1,16:17:42.14:1111,42,0	0/0:26,0:26:78.25:0,78,2882	0/0:32,0:32:93.31:0,93,3617	1/1:3,7:10:18.06:478,18,0	1/1:0,13:14:42.14:1101,42,0	1/1:1,13:14:27.09:580,27,0	1/1:0,34:34:90.31:2283,90,0	1/1:1,22:23:57.20:1467,57,0	1/1:2,24:27:69.24:1770,69,0	1/1:0,23:23:54.19:1355,54,0	1/1:0,31:31:81.28:2087,81,0	1/1:3,23:26:44.73:1075,45,0	1/1:2,12:14:33.11:859,33,0	0/0:22,0:22:54.19:0,54,2071	0/0:10,0:10:27.09:0,27,1106	1/1:2,15:17:38.59:908,39,0	1/1:2,10:12:24.08:609,24,0	1/1:1,9:10:27.09:712,27,0	1/1:4,15:19:27.51:640,28,0	1/1:0,10:10:24.08:589,24,0	1/1:1,29:30:87.30:2325,87,0	0/0:33,0:33:99:0,99,3869	1/1:0,4:4:12.04:323,12,0
chr10	82929534	.	A	ACT	22501.28	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-1.803;DP=655;FS=0.665;HRun=0;HaplotypeScore=89.2939;InbreedingCoeff=0.9685;MQ=85.11;MQ0=2;MQRankSum=-2.520;QD=49.89;ReadPosRankSum=5.685;VQSLOD=6.0366;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.30:0,93,1349	1/1:0,5:5:15.05:281,15,0	0/0:22,0:22:46.72:0,47,702	0/0:20,0:20:47.90:0,48,577	1/1:1,21:22:57.20:1064,57,0	1/1:0,18:19:54.18:991,54,0	0/0:25,0:25:72.24:0,72,1058	0/0:34,0:34:93.30:0,93,1335	1/1:0,17:17:51.17:955,51,0	1/1:2,23:25:69.22:1238,69,0	1/1:1,21:22:57.20:1067,57,0	1/1:1,25:26:69.24:1292,69,0	1/1:0,19:19:54.19:1011,54,0	1/1:3,16:19:48.16:893,48,0	1/1:2,32:35:93.32:1742,93,0	1/1:0,44:44:99:2248,120,0	1/1:2,33:35:93.32:1742,93,0	1/1:0,15:15:45.15:843,45,0	0/0:19,0:19:51.17:0,51,748	0/0:20,0:20:60.20:0,60,883	1/1:0,50:50:99:2472,132,0	1/1:0,21:21:57.20:1066,57,0	1/1:0,14:14:33.11:617,33,0	1/1:0,24:24:63.22:1180,63,0	1/1:1,24:24:60.21:1124,60,0	1/1:1,11:12:33.11:618,33,0	0/0:32,0:32:87.29:0,87,1278	1/1:0,1:1:3.01:56,3,0
chr10	82931708	.	TAA	T	6646.55	PASS	AB=0.727;AC=39;AF=0.696;AN=56;BaseQRankSum=-2.869;DP=648;FS=0.368;HRun=15;HaplotypeScore=97.8128;InbreedingCoeff=0.9462;MQ=80.31;MQ0=3;MQRankSum=0.230;QD=16.25;ReadPosRankSum=6.508;VQSLOD=4.0323;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:24:57.12:0,57,701	1/1:1,8:9:20.94:182,21,0	0/0:49,0:23:24.94:0,25,124	0/0:32,0:23:35.02:0,35,286	1/1:11,17:31:46.10:406,46,0	1/1:8,16:25:24.46:324,24,0	0/0:13,0:17:37.95:0,38,397	0/0:22,0:23:45.79:0,46,547	1/1:2,15:17:26.95:238,27,0	1/1:11,27:38:79.94:690,80,0	1/1:3,12:16:32.55:275,33,0	1/1:4,14:19:24.09:241,24,0	1/1:3,19:22:41.96:370,42,0	1/1:2,10:14:32.43:261,32,0	1/1:8,16:25:47.65:406,48,0	1/1:5,15:21:41.61:355,42,0	1/1:3,21:26:50.45:419,50,0	1/1:5,11:17:26.69:223,27,0	0/0:13,0:15:34.55:0,35,343	0/0:26,0:33:70.15:0,70,800	1/1:1,9:10:17.98:159,18,0	1/1:1,13:18:32.17:349,32,0	1/1:6,17:24:50.77:437,51,0	1/1:2,9:11:26.93:238,27,0	1/1:4,19:25:38.61:424,39,0	1/1:6,26:33:65.20:620,65,0	0/0:36,0:44:99:0,109,1089	0/1:5,1:8:1.50:29,0,1
chr10	82932737	.	A	AAG	694.99	PASS	AB=0.714;AC=25;AF=0.446;AN=56;BaseQRankSum=-0.463;DP=382;FS=6.746;HRun=0;HaplotypeScore=91.6402;InbreedingCoeff=-0.1805;MQ=98.66;MQ0=3;MQRankSum=-1.777;QD=2.66;ReadPosRankSum=3.915;VQSLOD=0.9920;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:20:23.14:0,23,180	1/1:3,0:5:2.97:20,3,0	0/1:42,0:31:8.99:9,0,443	0/0:43,0:30:1.72:0,2,249	0/1:5,0:10:9:31,0,9	1/1:8,0:10:8.68:66,9,0	0/0:2,0:11:14.23:0,14,57	0/0:4,0:12:4.07:0,4,156	0/1:4,0:10:0.34:35,0,0	0/0:5,0:6:9.20:0,9,40	0/1:6,0:9:17.13:17,0,21	0/1:8,0:12:27.32:27,0,77	0/1:5,0:6:30.24:30,0,57	0/1:6,1:21:16.89:135,0,17	0/1:7,1:18:0.13:29,0,0	0/1:7,0:19:69.01:101,0,69	0/1:9,0:25:36.68:125,0,37	0/1:4,0:10:9.39:64,0,9	0/0:11,0:14:24.66:0,25,241	0/0:6,1:12:17.38:0,17,130	0/1:4,0:6:11.06:11,0,37	0/1:4,0:4:0:0,0,0	0/1:4,0:11:11.50:35,0,11	1/1:1,0:4:2.83:42,3,0	0/1:9,1:13:35.15:35,0,41	0/1:6,0:7:14.80:15,0,37	0/1:2,0:13:1.48:1,0,81	1/1:0,0:3:2.97:20,3,0
chr10	82932959	.	A	AAAACAAAC	22835.62	PASS	AB=0.828;AC=51;AF=0.911;AN=56;BaseQRankSum=-1.029;DP=652;FS=2.775;HRun=0;HaplotypeScore=166.2088;InbreedingCoeff=0.7111;MQ=50.67;MQ0=9;MQRankSum=0.507;QD=38.44;ReadPosRankSum=2.617;VQSLOD=4.7405;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,13:24:42.14:1523,42,0	1/1:2,4:6:12.04:493,12,0	0/0:30,0:16:16.52:0,17,236	0/0:28,0:13:8.91:0,9,176	1/1:14,12:29:45.15:1568,45,0	1/1:7,0:23:44.94:367,45,0	1/1:8,8:18:27.09:1058,27,0	1/1:38,0:35:51.14:1190,51,0	1/1:2,0:17:32.96:269,33,0	1/1:11,10:21:36.12:1293,36,0	1/1:4,11:15:33.11:1354,33,0	1/1:7,0:20:32.95:269,33,0	1/1:16,9:28:36.12:1346,36,0	1/1:11,14:24:39.13:1466,39,0	1/1:6,22:28:54.19:2215,54,0	1/1:12,0:33:56.90:461,57,0	1/1:10,0:33:50.93:417,51,0	1/1:13,5:21:24.96:938,25,0	0/1:19,3:23:3.76:648,0,4	1/1:11,9:21:42.14:1529,42,0	1/1:14,3:18:6.02:160,6,0	1/1:9,6:16:18.53:741,19,0	1/1:11,0:21:25.06:197,25,0	1/1:16,0:37:50.93:416,51,0	1/1:3,0:16:23.77:185,24,0	1/1:8,15:23:45.10:1404,45,0	1/1:11,13:25:27.09:1080,27,0	1/1:5,3:10:6.02:246,6,0
chr10	82933407	.	C	CATA	28501.35	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-13.793;DP=710;FS=6.655;HRun=0;HaplotypeScore=93.7672;InbreedingCoeff=0.9939;MQ=84.74;MQ0=0;MQRankSum=-4.132;QD=55.99;ReadPosRankSum=6.466;VQSLOD=6.7439;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.22:0,75,1210	1/1:2,13:15:39.13:898,39,0	0/0:28,0:28:70.99:0,71,1095	0/0:20,0:20:45.15:0,45,751	1/1:0,40:42:99:2184,99,0	1/1:0,23:23:60.21:1383,60,0	0/0:10,0:10:30.10:0,30,512	0/0:30,0:30:84.29:0,84,1431	1/1:2,17:19:45.15:1034,45,0	1/1:3,34:38:99:2297,105,0	1/1:0,15:16:42.01:820,42,0	1/1:2,31:34:87.30:1999,87,0	1/1:4,24:28:75.22:1663,75,0	1/1:3,20:23:63.14:1353,63,0	1/1:2,30:33:90.27:2025,90,0	1/1:0,28:28:72.25:1656,72,0	1/1:4,27:31:66.23:1521,66,0	1/1:2,16:18:48.15:1061,48,0	0/0:18,0:18:51.16:0,51,820	0/0:34,0:34:99:0,99,1628	1/1:2,11:14:27.09:623,27,0	1/1:2,28:32:60.21:1383,60,0	1/1:3,28:31:78.74:1768,79,0	1/1:1,7:8:21.07:484,21,0	1/1:4,27:31:72.20:1606,72,0	1/1:6,32:38:99:2466,111,0	0/0:35,0:34:99:0,105,1790	1/1:1,4:6:12.04:277,12,0
chr10	82935987	.	TGTC	T	636.86	PASS	AB=0.779;AC=2;AF=0.036;AN=56;BaseQRankSum=7.809;DP=743;FS=4.229;HRun=0;HaplotypeScore=116.4420;InbreedingCoeff=-0.0371;MQ=97.24;MQ0=0;MQRankSum=7.442;QD=8.49;ReadPosRankSum=-2.232;VQSLOD=2.8971;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,3267	0/0:9,0:9:27.09:0,27,641	0/1:22,10:32:99:317,0,1462	0/1:32,11:43:99:409,0,1838	0/0:25,0:25:72.20:0,72,1567	0/0:32,0:31:90.31:0,90,2165	0/0:25,0:25:75.24:0,75,1797	0/0:37,0:36:99:0,108,2505	0/0:21,0:21:63.22:0,63,1528	0/0:15,0:15:45.15:0,45,1094	0/0:19,0:19:57.20:0,57,1402	0/0:23,0:23:69.24:0,69,1701	0/0:29,0:29:87.25:0,87,2034	0/0:26,0:26:75.23:0,75,1724	0/0:32,0:32:93.32:0,93,2236	0/0:30,0:30:87.30:0,87,2120	0/0:26,0:26:72.25:0,72,1718	0/0:10,0:10:30.10:0,30,740	0/0:31,0:31:93.32:0,93,2241	0/0:18,0:18:54.17:0,54,1275	0/0:54,0:54:99:0,163,3820	0/0:13,0:13:39.13:0,39,936	0/0:14,0:14:42.14:0,42,1035	0/0:28,0:28:84.29:0,84,2070	0/0:31,0:31:93.32:0,93,2244	0/0:30,0:30:90.31:0,90,2186	0/0:34,0:34:99:0,102,2406	0/0:9,0:9:27.09:0,27,666
chr10	82936499	.	CGT	C	579.15	PASS	AB=1.000;AC=31;AF=0.705;AN=44;BaseQRankSum=1.210;DP=522;FS=0.000;HRun=0;HaplotypeScore=67.3158;InbreedingCoeff=0.4487;MQ=70.36;MQ0=12;MQRankSum=1.393;QD=2.05;ReadPosRankSum=3.651;VQSLOD=1.2960;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:11.86:0,12,111	./.	./.	./.	1/1:21,0:21:5.99:50,6,0	0/1:30,0:31:17.35:17,0,20	0/0:14,0:13:5.96:0,6,45	0/0:28,0:26:2.50:0,2,9	1/1:15,3:18:6.01:63,6,0	./.	./.	1/1:10,2:11:3.01:32,3,0	1/1:13,2:15:3.01:32,3,0	1/1:11,1:12:3.01:32,3,0	1/1:19,0:21:5.68:28,6,0	1/1:21,2:23:3:32,3,0	1/1:17,1:19:5.85:46,6,0	1/1:9,2:11:2.51:31,3,0	0/0:17,0:17:9.02:0,9,115	0/0:17,0:15:11.95:0,12,125	./.	1/1:17,0:17:0.94:2,1,0	1/1:11,2:13:3:32,3,0	1/1:21,4:29:23.39:183,23,0	1/1:13,1:13:3.01:32,3,0	1/1:18,0:18:5.99:49,6,0	0/0:24,0:24:14.40:0,14,183	1/1:7,2:8:6.01:63,6,0
chr10	82939997	.	CT	C	8128.14	PASS	AB=0.956;AC=42;AF=0.750;AN=56;BaseQRankSum=14.569;DP=624;FS=0.736;HRun=8;HaplotypeScore=113.8969;InbreedingCoeff=0.7980;MQ=57.86;MQ0=8;MQRankSum=-3.202;QD=18.69;ReadPosRankSum=2.414;VQSLOD=4.0529;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,1355	1/1:0,6:6:18.03:173,18,0	0/1:26,1:9:16.36:16,0,82	0/1:17,0:9:17.11:17,0,34	1/1:6,35:41:87.13:838,87,0	1/1:3,17:20:45.06:434,45,0	0/0:24,0:24:63.15:0,63,744	0/0:39,0:39:78.23:0,78,932	1/1:4,16:19:39.06:377,39,0	1/1:4,16:20:51.07:491,51,0	1/1:5,16:21:48.06:457,48,0	1/1:1,13:13:30.04:289,30,0	1/1:3,18:20:48.06:458,48,0	1/1:5,14:18:45.06:432,45,0	1/1:3,21:22:51.07:492,51,0	1/1:2,20:19:45.07:434,45,0	1/1:1,18:19:42.06:405,42,0	1/1:2,9:11:7.38:186,7,0	0/0:21,0:21:48.12:0,48,557	0/0:29,0:29:84.25:0,84,1005	1/1:6,10:16:25.31:258,25,0	1/1:2,14:15:30.04:289,30,0	1/1:6,15:21:42.05:404,42,0	1/1:1,12:12:27.03:260,27,0	1/1:2,19:20:54.08:521,54,0	1/1:7,25:32:72.11:695,72,0	0/0:34,0:33:81.25:0,81,978	1/1:5,8:12:21.02:203,21,0
chr10	82940048	.	AGCGCTCTACC	A	20601.24	PASS	AB=0.981;AC=42;AF=0.750;AN=56;BaseQRankSum=13.672;DP=637;FS=31.791;HRun=0;HaplotypeScore=222.0978;InbreedingCoeff=0.8165;MQ=57.81;MQ0=35;MQRankSum=-15.619;QD=49.29;ReadPosRankSum=5.251;VQSLOD=2.8231;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:35:3.41:3,0,4332	1/1:1,4:5:12.04:375,12,0	0/0:33,0:9:18:0,18,259	0/0:74,0:19:40.43:0,40,910	1/1:10,16:26:36.02:853,36,0	1/1:5,11:16:33.11:972,33,0	0/1:24,1:25:33.56:34,0,2667	0/0:32,0:32:63.22:0,63,2955	1/1:5,14:19:39.13:1194,39,0	1/1:3,12:14:36.12:1125,36,0	1/1:2,15:17:42.14:1251,42,0	1/1:2,22:23:60.16:1793,60,0	1/1:4,18:21:39.13:1219,39,0	1/1:6,15:20:45.15:1402,45,0	1/1:3,18:19:48.16:1478,48,0	1/1:5,17:19:33.11:1031,33,0	1/1:4,8:12:24.08:745,24,0	1/1:5,5:10:15.05:449,15,0	0/0:20,0:18:33.11:0,33,1558	0/0:30,0:30:78.27:0,78,3707	1/1:7,8:15:15.42:233,15,0	1/1:7,9:15:27.09:843,27,0	1/1:1,19:20:54.19:1687,54,0	1/1:8,10:17:9.94:284,10,0	1/1:6,25:30:66.18:1942,66,0	1/1:7,15:21:42.14:1313,42,0	0/0:27,0:26:60.21:0,60,2914	1/1:0,5:4:12.04:375,12,0
chr10	82941023	.	TAATAAATA	T	3126.34	PASS	AC=32;AF=0.762;AN=42;BaseQRankSum=6.299;DP=242;FS=0.000;HRun=0;HaplotypeScore=55.9708;InbreedingCoeff=0.6889;MQ=52.61;MQ0=6;MQRankSum=-5.652;QD=26.27;ReadPosRankSum=1.707;VQSLOD=2.7806;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:30.09:0,30,1119	./.	./.	./.	./.	1/1:4,2:6:12.04:261,12,0	./.	0/0:38,0:38:63.21:0,63,1902	1/1:0,1:1:3.01:76,3,0	./.	1/1:8,1:9:12.04:258,12,0	1/1:4,2:6:6.02:152,6,0	1/1:3,2:5:12.04:239,12,0	1/1:7,3:10:9.03:229,9,0	1/1:3,3:6:9.03:205,9,0	1/1:1,6:6:15.05:355,15,0	1/1:14,0:13:9.03:181,9,0	1/1:12,3:12:15.05:299,15,0	0/0:10,0:8:9.03:0,9,364	0/0:7,0:7:12.04:0,12,478	1/1:6,1:7:3.01:38,3,0	1/1:2,0:2:3.01:56,3,0	1/1:3,2:5:6.02:128,6,0	./.	1/1:8,6:14:27.09:617,27,0	1/1:6,0:6:3.01:56,3,0	0/0:13,0:13:15.05:0,15,622	1/1:4,2:6:6.02:129,6,0
chr10	82941096	.	T	TGATCTTTGGTAGCCAATTACACATA	51906.85	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-2.983;DP=457;FS=10.422;HRun=0;HaplotypeScore=206.4268;InbreedingCoeff=0.9354;MQ=76.94;MQ0=0;MQRankSum=-14.607;QD=171.31;ReadPosRankSum=4.877;VQSLOD=3.3951;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.20:0,57,3329	1/1:1,1:5:6.02:620,6,0	0/0:17,0:17:43.70:0,44,1731	0/0:14,0:14:36.10:0,36,1524	1/1:6,3:16:21.07:1900,21,0	1/1:5,5:17:27.09:2374,27,0	0/0:10,0:10:27.08:0,27,1393	0/0:34,0:34:96.33:0,96,5029	1/1:4,2:14:12.04:1415,12,0	1/1:9,7:28:72.23:7166,72,0	1/1:3,6:13:27.09:2832,27,0	1/1:3,5:16:21.07:2458,21,0	1/1:4,2:9:15.05:1299,15,0	1/1:7,6:16:36.12:3159,36,0	1/1:4,8:16:36.12:3668,36,0	1/1:13,1:15:39.13:3344,39,0	1/1:7,3:19:27.09:2716,27,0	1/1:3,2:13:12.04:1023,12,0	0/0:24,0:24:72.25:0,72,3712	0/0:22,0:22:63.20:0,63,3736	1/1:1,1:5:6.02:534,6,0	1/1:3,9:21:36.12:4038,36,0	1/1:2,4:14:18.06:1677,18,0	1/1:5,0:5:9.03:777,9,0	1/1:10,6:24:39.13:3396,39,0	1/1:7,4:25:69.24:6278,69,0	0/0:14,0:14:42.14:0,42,2396	1/1:2,2:8:12.04:1231,12,0
chr10	82941591	.	G	GT	15772.06	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=14.428;DP=644;FS=0.000;HRun=4;HaplotypeScore=115.6244;InbreedingCoeff=0.9996;MQ=93.98;MQ0=0;MQRankSum=-4.583;QD=35.05;ReadPosRankSum=5.505;VQSLOD=3.6206;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1185	1/1:0,12:12:30.10:410,30,0	0/0:24,0:24:35.46:0,35,537	0/0:32,0:32:74.69:0,75,812	1/1:0,26:26:69.23:943,69,0	1/1:3,24:27:66.22:902,66,0	1/1:1,20:21:57.19:780,57,0	0/0:33,0:33:81.20:0,81,894	1/1:1,20:21:51.17:697,51,0	1/1:3,21:24:66.21:888,66,0	1/1:3,11:14:29.69:410,30,0	1/1:3,20:23:57.12:758,57,0	1/1:2,26:28:75.25:1016,75,0	1/1:0,16:16:39.13:533,39,0	1/1:0,29:29:81.27:1107,81,0	1/1:4,23:27:66.15:869,66,0	1/1:2,18:20:51.17:697,51,0	1/1:3,13:16:36.12:492,36,0	0/0:26,0:26:75.20:0,75,839	0/0:16,0:16:42.12:0,42,474	1/1:2,29:31:81.27:1107,81,0	1/1:1,15:16:45.15:614,45,0	1/1:2,22:24:66.22:897,66,0	1/1:3,22:25:60.20:820,60,0	1/1:0,15:15:42.14:574,42,0	1/1:2,21:23:63.20:846,63,0	0/0:26,0:26:69.18:0,69,773	1/1:1,11:12:30.10:410,30,0
chr10	82941686	.	AT	A	2832.38	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.712;DP=753;FS=14.768;HRun=2;HaplotypeScore=157.1556;InbreedingCoeff=0.9990;MQ=81.77;MQ0=0;MQRankSum=-5.517;QD=36.78;ReadPosRankSum=1.418;VQSLOD=1.3586;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,58:58:99:2241,162,0	0/0:15,0:15:39.13:0,39,618	0/0:27,0:27:78.15:0,78,1045	0/0:19,0:19:47.95:0,48,666	0/0:33,0:33:99:0,99,1581	0/0:29,0:29:84.29:0,84,1338	1/1:0,19:19:51.17:713,51,0	0/0:31,0:31:93.30:0,93,1439	0/0:30,0:30:87.30:0,87,1381	0/0:33,0:33:99:0,99,1583	0/0:18,0:18:51.17:0,51,813	0/0:24,0:24:66.21:0,66,1031	0/0:26,0:26:75.24:0,75,1175	0/0:18,0:18:45.10:0,45,690	0/0:42,0:42:99:0,123,1937	0/0:31,0:31:87.27:0,87,1338	0/0:37,0:37:99:0,111,1773	0/0:9,0:9:27.09:0,27,431	0/0:28,0:28:84.25:0,84,1294	0/0:30,0:30:87.30:0,87,1386	0/0:32,0:32:90.31:0,90,1431	0/0:24,0:24:72.25:0,72,1147	0/0:24,0:24:63.21:0,63,1002	0/0:29,0:29:84.17:0,84,1341	0/0:11,0:11:33.11:0,33,527	0/0:42,0:42:99:0,126,2010	0/0:24,0:24:72.23:0,72,1126	0/0:10,0:10:30.10:0,30,479
chr10	82942385	.	T	TA	3464.33	PASS	AB=0.708;AC=34;AF=0.630;AN=54;BaseQRankSum=8.342;DP=386;FS=1.505;HRun=10;HaplotypeScore=82.2543;InbreedingCoeff=0.5304;MQ=55.03;MQ0=5;MQRankSum=-0.504;QD=14.26;ReadPosRankSum=0.367;VQSLOD=3.9686;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:47.93:0,48,392	1/1:1,6:7:6.36:173,6,0	0/0:18,0:9:10.69:0,11,98	0/0:3,0:2:2.97:0,3,25	1/1:10,10:21:16.30:308,16,0	0/1:9,7:16:7.85:135,0,8	0/0:6,0:6:5.96:0,6,49	0/0:33,0:32:55.69:0,56,452	1/1:5,3:8:16.32:135,16,0	0/1:11,3:14:32.40:104,0,32	1/1:6,6:12:6.86:154,7,0	1/1:0,8:9:24.02:241,24,0	1/1:1,7:8:18.04:188,18,0	1/1:3,3:6:13.75:107,14,0	1/1:3,4:7:11.98:114,12,0	0/1:11,9:21:1.59:219,0,2	1/1:12,12:23:6.72:363,7,0	1/1:13,8:21:0.25:257,0,0	0/0:15,0:15:32.93:0,33,267	0/0:19,0:19:41.94:0,42,345	1/1:2,6:7:8.19:93,8,0	1/1:0,2:2:3.01:32,3,0	0/1:3,4:7:8.45:109,0,8	./.	1/1:6,18:24:21.38:359,21,0	1/1:12,6:18:13.61:230,14,0	0/0:28,0:27:80.79:0,81,650	1/1:3,5:8:2.46:142,2,0
chr10	82943082	.	C	CATCT	3071.13	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-8.691;DP=862;FS=1.234;HRun=0;HaplotypeScore=134.2375;InbreedingCoeff=0.8529;MQ=78.02;MQ0=0;MQRankSum=-3.228;QD=36.56;ReadPosRankSum=-1.643;VQSLOD=3.5534;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,30:47:81.28:2045,81,0	0/0:11,0:11:30.09:0,30,486	0/0:24,0:24:57.19:0,57,964	0/1:13,0:13:2.17:2,0,452	0/0:35,0:35:87.30:0,87,1525	0/0:34,0:34:93.32:0,93,1628	1/1:9,15:24:45.15:1147,45,0	0/0:41,0:41:96.29:0,96,1552	0/0:22,0:22:57.20:0,57,990	0/0:42,0:42:99:0,111,1901	0/0:26,0:26:63.21:0,63,1079	0/0:30,0:30:84.29:0,84,1472	0/0:41,0:41:99:0,117,2046	0/0:38,0:38:99:0,108,1795	0/0:42,0:42:99:0,123,2147	0/0:42,0:42:99:0,120,2060	0/0:29,0:29:63.20:0,63,1065	0/0:13,0:13:33.11:0,33,578	0/0:19,0:19:51.15:0,51,791	0/0:49,0:49:99:0,132,2297	0/0:45,0:45:99:0,102,1779	0/0:31,0:31:78.27:0,78,1354	0/0:32,0:32:90.31:0,90,1568	0/0:26,0:26:63.22:0,63,1103	0/0:23,0:23:54.18:0,54,924	0/0:33,0:33:96.33:0,96,1683	0/0:38,0:38:99:0,99,1707	0/0:12,0:12:36.12:0,36,631
chr10	82945991	.	T	TAG	7335.80	PASS	AC=40;AF=0.800;AN=50;BaseQRankSum=-7.383;DP=770;FS=10.885;HRun=0;HaplotypeScore=33.5458;InbreedingCoeff=0.8970;MQ=28.28;MQ0=174;MQRankSum=1.574;QD=12.94;ReadPosRankSum=2.818;VQSLOD=3.0995;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:27:36.12:0,36,503	1/1:0,8:6:9.03:162,9,0	./.	./.	1/1:1,22:17:17.94:323,18,0	1/1:17,32:28:30.10:521,30,0	./.	0/0:20,0:4:12.02:0,12,149	1/1:15,23:15:18.06:323,18,0	1/1:4,24:19:51.17:918,51,0	1/1:0,17:13:12.04:216,12,0	1/1:11,27:16:6.02:108,6,0	1/1:15,22:16:11.78:215,12,0	1/1:6,23:15:9.03:142,9,0	1/1:25,36:27:29.87:523,30,0	1/1:12,20:14:15.05:270,15,0	1/1:8,23:21:30.10:540,30,0	1/1:8,13:12:12.04:216,12,0	0/0:28,0:9:27.09:0,27,378	0/0:30,0:28:63.21:0,63,880	1/1:5,17:20:18.06:323,18,0	1/1:0,11:5:12.04:216,12,0	1/1:0,10:9:15.05:270,15,0	1/1:4,20:16:15.05:270,15,0	1/1:2,25:19:36.12:647,36,0	1/1:14,21:13:39.13:701,39,0	0/0:49,0:33:27.09:0,27,377	1/1:5,17:13:24.08:432,24,0
chr10	82950301	.	AG	A	1739.48	PASS	AB=0.770;AC=43;AF=0.768;AN=56;BaseQRankSum=3.619;DP=399;FS=18.301;HRun=6;HaplotypeScore=58.6711;InbreedingCoeff=0.2045;MQ=41.56;MQ0=28;MQRankSum=-3.719;QD=4.98;ReadPosRankSum=3.021;VQSLOD=-0.3222;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,6:20:34.79:187,35,0	1/1:7,0:5:1.36:3,1,0	0/0:27,0:17:32.25:0,32,505	0/1:17,0:10:7.90:8,0,223	1/1:6,4:6:8.25:29,8,0	1/1:4,8:7:7.67:44,8,0	1/1:8,16:9:9.02:97,9,0	0/0:21,1:16:16.18:0,16,118	1/1:7,2:8:5.24:13,5,0	0/1:13,5:13:22.91:57,0,23	1/1:2,6:6:6.02:64,6,0	1/1:8,7:11:17.76:127,18,0	1/1:6,4:6:5.81:39,6,0	1/1:6,7:8:1.55:4,2,0	1/1:2,11:10:15.62:139,16,0	1/1:12,6:14:12.65:56,13,0	1/1:4,4:4:5.98:64,6,0	1/1:0,4:3:3.01:32,3,0	0/1:14,7:14:89.64:105,0,90	0/1:7,9:14:15.60:55,0,16	1/1:7,0:7:3.63:10,4,0	0/1:9,2:9:11.88:12,0,22	1/1:6,6:9:18.93:138,19,0	1/1:10,8:12:13.03:72,13,0	0/1:7,7:13:1.27:155,0,1	0/1:7,5:9:2.56:73,0,3	1/1:6,22:21:33.80:310,34,0	0/0:1,0:1:2.94:0,3,18
chr10	82950308	.	AG	A	2214.41	PASS	AB=0.832;AC=30;AF=0.536;AN=56;BaseQRankSum=8.265;DP=393;FS=2.853;HRun=6;HaplotypeScore=58.0092;InbreedingCoeff=-0.1318;MQ=42.98;MQ0=29;MQRankSum=-5.552;QD=6.92;ReadPosRankSum=4.431;VQSLOD=-0.4736;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:14,13:23:99:506,0,129	1/1:3,2:4:6.02:84,6,0	0/1:18,4:17:4.29:4,0,562	0/0:12,1:10:23.77:0,24,284	1/1:6,3:5:11.93:142,12,0	0/1:13,3:10:90.66:106,0,91	0/0:20,0:7:4.66:0,5,11	1/1:24,1:16:10.32:66,10,0	1/1:5,4:8:12.04:168,12,0	0/1:13,3:10:27.62:28,0,73	0/0:6,0:4:2.80:0,3,6	0/1:12,5:13:68.44:183,0,68	0/1:8,2:7:36.17:73,0,36	1/1:8,1:5:3.01:42,3,0	0/1:11,2:10:3.95:71,0,4	0/1:11,7:15:92.07:261,0,92	0/0:10,0:8:6.38:0,6,51	0/0:9,0:7:11.40:0,11,129	0/1:16,1:11:25.72:26,0,68	0/0:15,0:13:3.17:0,3,8	0/1:8,2:7:36.74:75,0,37	1/1:8,2:8:5.93:59,6,0	1/1:10,2:9:10.98:121,11,0	0/1:14,5:13:74.28:145,0,74	0/1:13,1:13:31.59:40,0,32	0/1:7,1:6:7.65:35,0,8	0/1:25,5:23:86.93:132,0,87	1/1:4,0:2:2.74:12,3,0
chr10	82950503	.	CG	C	4143.62	PASS	AB=0.537;AC=34;AF=0.607;AN=56;BaseQRankSum=9.394;DP=558;FS=5.040;HRun=4;HaplotypeScore=71.7989;InbreedingCoeff=0.4560;MQ=39.42;MQ0=57;MQRankSum=-3.217;QD=11.45;ReadPosRankSum=1.237;VQSLOD=1.2219;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:99:0,117,1611	1/1:0,13:12:9.03:108,9,0	0/0:15,0:2:1.75:0,2,39	0/0:26,0:4:11.86:0,12,115	1/1:2,13:10:9.02:108,9,0	0/1:2,16:7:36.34:60,0,36	0/0:38,0:36:78.18:0,78,1004	0/0:21,0:10:8.23:0,8,338	0/1:1,12:10:8.70:193,0,9	1/1:4,28:28:78.05:895,78,0	1/1:0,7:7:9.03:107,9,0	0/1:3,16:12:30.55:223,0,31	1/1:2,22:14:21.03:250,21,0	1/1:1,15:10:17.84:191,18,0	0/1:2,10:10:32.06:125,0,32	0/1:4,22:19:32.63:202,0,33	1/1:0,37:31:29.92:335,30,0	1/1:0,14:11:6.02:70,6,0	0/0:20,0:10:30.10:0,30,420	0/0:19,0:19:54.18:0,54,754	1/1:6,32:22:24.07:287,24,0	1/1:0,12:10:12.04:144,12,0	1/1:2,6:8:9.03:108,9,0	1/1:3,12:13:11.87:121,12,0	1/1:2,17:16:17.56:215,18,0	0/1:3,16:12:8.73:294,0,9	0/0:15,0:14:36.07:0,36,453	1/1:0,5:5:9.03:108,9,0
chr10	82950642	.	C	CGGGG	7860.66	PASS	AB=0.571;AC=39;AF=0.722;AN=54;BaseQRankSum=8.505;DP=383;FS=28.088;HRun=0;HaplotypeScore=76.0646;InbreedingCoeff=0.7447;MQ=32.27;MQ0=11;MQRankSum=-6.856;QD=37.08;ReadPosRankSum=1.474;VQSLOD=2.5572;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.30:0,96,1381	1/1:2,5:7:3.41:326,3,0	./.	0/0:18,0:2:6.02:0,6,94	0/1:3,9:8:8.97:317,0,9	1/1:1,14:9:27.09:574,27,0	0/0:26,0:25:63.19:0,63,905	0/0:21,0:18:50.33:0,50,747	1/1:2,13:8:21.06:474,21,0	1/1:2,7:6:12.04:273,12,0	1/1:1,7:5:11.72:260,12,0	1/1:6,13:14:35.98:665,36,0	1/1:1,16:13:36.12:803,36,0	1/1:3,6:6:12.03:249,12,0	1/1:0,10:7:21.07:457,21,0	1/1:1,7:6:15.04:331,15,0	1/1:1,9:6:12.04:269,12,0	1/1:2,6:3:3.01:68,3,0	0/0:12,0:9:27.09:0,27,412	0/0:20,0:19:36.01:0,36,547	1/1:1,1:2:3.01:69,3,0	1/1:0,11:10:30.10:654,30,0	1/1:1,13:9:1.39:499,1,0	1/1:2,4:5:12.04:259,12,0	1/1:0,8:5:15.05:333,15,0	1/1:2,16:12:32.81:742,33,0	0/0:22,0:22:57.19:0,57,825	1/1:3,3:4:12.04:237,12,0
chr10	82950643	.	A	AT	3135.31	PASS	AB=0.607;AC=36;AF=0.667;AN=54;BaseQRankSum=10.727;DP=413;FS=31.125;HRun=1;HaplotypeScore=92.4060;InbreedingCoeff=0.5981;MQ=32.83;MQ0=11;MQRankSum=-6.337;QD=13.17;ReadPosRankSum=1.435;VQSLOD=1.1218;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:96.28:0,96,1165	0/1:2,5:7:17.14:114,0,17	./.	0/0:17,0:2:3.01:0,3,34	0/1:3,9:8:14.48:149,0,14	1/1:4,14:12:16.12:262,16,0	0/0:27,0:26:63.16:0,63,755	0/0:25,0:22:48.15:0,48,591	1/1:2,13:8:23.96:203,24,0	1/1:2,7:6:11.66:106,12,0	1/1:1,7:5:10.69:116,11,0	1/1:10,13:18:24.49:298,24,0	1/1:1,16:13:35.98:303,36,0	1/1:7,6:10:23.63:182,24,0	1/1:4,10:11:26.95:220,27,0	1/1:1,7:6:17.95:143,18,0	1/1:3,9:8:20.07:145,20,0	1/1:2,6:3:3:27,3,0	0/0:13,0:9:27.08:0,27,332	0/0:20,0:19:36.11:0,36,446	1/1:2,1:3:2.60:10,3,0	1/1:0,11:10:29.88:242,30,0	0/1:7,13:15:3.13:200,0,3	1/1:2,4:5:7.68:71,8,0	1/1:2,8:7:20.85:164,21,0	1/1:2,16:12:35.20:307,35,0	0/0:21,0:21:57.18:0,57,705	0/1:3,3:4:8.81:65,0,9
chr10	82952539	.	CA	C	11589.78	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.203;DP=578;FS=5.754;HRun=9;HaplotypeScore=64.6770;InbreedingCoeff=0.9748;MQ=70.60;MQ0=2;MQRankSum=-0.237;QD=23.32;ReadPosRankSum=5.029;VQSLOD=5.5376;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:47.24:418,47,0	1/1:3,6:9:15:137,15,0	0/0:31,0:16:30.21:0,30,391	0/0:50,0:21:14.60:0,15,234	1/1:2,22:24:66.03:602,66,0	1/1:2,13:15:42.02:384,42,0	1/1:2,9:11:27.01:247,27,0	1/1:5,23:28:68.99:620,69,0	1/1:2,10:12:27.01:247,27,0	1/1:0,20:20:60.03:549,60,0	1/1:3,22:25:66.03:603,66,0	1/1:3,15:18:45.02:412,45,0	1/1:5,22:27:57.01:516,57,0	1/1:1,17:18:48.03:439,48,0	1/1:1,19:20:57.03:522,57,0	1/1:4,22:26:63.03:577,63,0	1/1:1,25:26:66.03:604,66,0	1/1:1,16:17:36.90:377,37,0	1/1:3,14:16:44.93:400,45,0	1/1:2,26:28:77.96:702,78,0	1/1:1,5:6:18:160,18,0	1/1:1,22:23:57.02:521,57,0	1/1:0,17:17:51.03:467,51,0	1/1:2,11:13:29.92:274,30,0	1/1:2,13:15:36.02:329,36,0	1/1:3,19:22:57.03:522,57,0	1/1:1,33:34:84.05:768,84,0	1/1:0,7:7:21.01:192,21,0
chr10	82953656	.	G	GA	12751.60	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-14.226;DP=657;FS=2.968;HRun=8;HaplotypeScore=58.4310;InbreedingCoeff=0.9892;MQ=80.96;MQ0=0;MQRankSum=-2.268;QD=27.13;ReadPosRankSum=3.924;VQSLOD=5.4394;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.03:0,81,737	1/1:1,10:11:30.09:346,30,0	0/0:24,0:23:44.23:0,44,412	0/0:14,0:13:9.04:0,9,153	1/1:2,29:31:75.11:834,75,0	1/1:5,24:29:75.22:863,75,0	0/0:15,0:15:39.02:0,39,357	0/0:29,0:29:72.01:0,72,655	1/1:4,17:21:36.11:415,36,0	1/1:5,24:29:75.22:856,75,0	1/1:4,22:26:63.19:727,63,0	1/1:2,23:25:60.14:678,60,0	1/1:8,20:28:57.17:657,57,0	1/1:3,19:22:48.14:554,48,0	1/1:3,24:28:65.93:742,66,0	1/1:4,21:25:32.71:630,33,0	1/1:5,25:31:22.97:776,23,0	1/1:3,25:28:63.19:725,63,0	0/0:26,0:26:66.03:0,66,604	0/0:24,0:24:56.70:0,57,505	1/1:1,22:24:63.02:707,63,0	1/1:2,15:17:45.13:519,45,0	1/1:3,10:13:27.08:312,27,0	1/1:3,11:14:30.09:346,30,0	1/1:2,24:26:69.21:796,69,0	1/1:5,27:32:84.23:956,84,0	0/0:27,0:27:72.01:0,72,653	1/1:0,10:10:27.08:312,27,0
chr10	82954881	.	A	AT	14660.24	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=1.925;DP=577;FS=2.011;HRun=2;HaplotypeScore=92.8469;InbreedingCoeff=0.3274;MQ=73.11;MQ0=0;MQRankSum=-2.977;QD=27.20;ReadPosRankSum=4.588;VQSLOD=4.6325;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:39.51:117,0,40	1/1:0,11:11:24.08:344,24,0	0/0:24,0:19:24.69:0,25,394	0/0:13,0:12:4.47:0,4,121	1/1:2,26:28:75.67:1034,76,0	1/1:1,26:27:63.21:889,63,0	0/1:9,0:9:23.45:23,0,40	0/1:33,0:33:75.95:76,0,184	1/1:0,12:12:24.08:343,24,0	1/1:2,27:29:78.23:1060,78,0	1/1:2,32:35:69.72:1115,70,0	1/1:5,15:20:55.03:723,55,0	1/1:0,26:26:66.22:946,66,0	1/1:2,9:11:28.65:391,29,0	1/1:3,19:22:54.18:775,54,0	1/1:0,18:18:48.16:688,48,0	1/1:1,15:16:40.97:599,41,0	1/1:5,13:18:48.56:624,49,0	0/1:11,0:11:6.21:6,0,73	1/1:27,0:27:39.40:154,39,0	1/1:2,12:14:27.09:388,27,0	1/1:1,11:12:29.52:428,30,0	1/1:0,18:18:41.84:576,42,0	1/1:0,16:16:45.15:644,45,0	1/1:1,23:24:55.07:777,55,0	1/1:2,33:35:99:1338,102,0	0/1:24,0:24:12.85:85,0,13	1/1:0,14:14:36.12:516,36,0
chr10	82954883	.	T	TA	8349.81	PASS	AB=0.930;AC=48;AF=0.857;AN=56;BaseQRankSum=-0.175;DP=595;FS=0.559;HRun=10;HaplotypeScore=116.1327;InbreedingCoeff=0.1762;MQ=74.45;MQ0=0;MQRankSum=-3.209;QD=14.37;ReadPosRankSum=6.278;VQSLOD=4.4682;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:30:25.92:686,26,0	1/1:12,0:12:23.33:136,23,0	0/1:26,0:21:2.50:2,0,198	0/0:14,0:12:1.99:0,2,64	1/1:28,0:29:32.24:374,32,0	1/1:26,0:27:61.53:368,62,0	0/1:3,8:11:0.58:200,0,1	1/1:8,26:35:56.47:767,56,0	1/1:12,0:12:23.51:147,24,0	1/1:29,0:29:14.28:316,14,0	1/1:37,0:37:25.80:371,26,0	1/1:19,0:19:22.36:247,22,0	1/1:26,0:26:64.01:370,64,0	0/1:13,0:13:30.47:121,0,30	1/1:21,0:21:13.92:251,14,0	1/1:19,0:19:28.31:248,28,0	1/1:16,0:16:19.46:229,19,0	0/1:18,0:18:1.59:201,0,2	1/1:5,9:14:27.01:257,27,0	1/1:1,26:27:76.20:814,76,0	0/1:13,0:13:9.07:120,0,9	0/1:12,0:12:8.13:143,0,8	1/1:20,0:20:19.83:206,20,0	1/1:17,0:17:26.80:246,27,0	1/1:23,0:23:30.66:270,31,0	1/1:34,0:35:43.34:410,43,0	1/1:3,23:26:41.47:634,41,0	1/1:14,0:14:35.18:213,35,0
chr10	82955288	.	A	AT	11794.64	PASS	AB=0.813;AC=41;AF=0.732;AN=56;BaseQRankSum=-13.733;DP=610;FS=3.559;HRun=8;HaplotypeScore=58.7248;InbreedingCoeff=0.7844;MQ=67.65;MQ0=0;MQRankSum=-1.752;QD=26.39;ReadPosRankSum=2.622;VQSLOD=5.7224;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:71.03:0,71,630	1/1:0,7:7:21.06:242,21,0	0/1:9,0:9:4.30:4,0,38	0/1:6,1:6:8.28:8,0,49	1/1:2,27:29:50.69:809,51,0	1/1:4,27:31:63.19:727,63,0	0/0:19,0:20:56.06:0,56,500	0/0:42,0:42:92.34:0,92,820	1/1:3,18:21:57.16:648,57,0	1/1:3,26:29:69.19:785,69,0	1/1:4,23:27:32.63:601,33,0	1/1:5,12:17:39.11:441,39,0	0/1:3,10:13:0.39:250,0,0	1/1:2,21:23:60.18:692,60,0	1/1:2,24:26:65.75:761,66,0	1/1:3,18:21:48.14:554,48,0	1/1:1,15:16:20.68:492,21,0	1/1:3,10:13:5.64:319,6,0	0/0:20,0:20:60.02:0,60,546	0/0:27,0:27:74.93:0,75,674	1/1:1,18:19:51.15:589,51,0	1/1:2,19:21:52:575,52,0	1/1:2,21:23:57.04:658,57,0	1/1:4,17:21:45.13:519,45,0	1/1:2,23:25:60.18:692,60,0	1/1:3,30:33:90.19:1003,90,0	0/0:25,0:25:75.04:0,75,686	1/1:3,13:16:14.66:423,15,0
chr10	82957977	.	AAC	A	2124.21	PASS	AB=1.000;AC=44;AF=0.880;AN=50;BaseQRankSum=-3.001;DP=299;FS=10.215;HRun=0;HaplotypeScore=56.4071;InbreedingCoeff=0.3523;MQ=58.77;MQ0=7;MQRankSum=-1.539;QD=8.43;ReadPosRankSum=-2.477;VQSLOD=1.4842;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,1:26:43.88:344,44,0	1/1:6,0:6:2.97:20,3,0	0/0:30,0:19:34.16:0,34,512	0/0:13,0:8:7.99:0,8,147	1/1:10,0:9:7.34:30,7,0	0/1:14,0:11:6.13:17,0,6	1/1:6,1:7:12:86,12,0	1/1:25,1:24:38.55:313,39,0	./.	0/1:12,0:11:33.77:94,0,34	1/1:8,0:7:8.78:53,9,0	1/1:5,0:4:9.51:50,10,0	1/1:5,0:4:5.87:36,6,0	1/1:4,0:4:8.62:46,9,0	1/1:7,0:4:6.79:41,7,0	1/1:4,0:1:2.88:15,3,0	1/1:5,0:4:5.36:32,5,0	./.	1/1:16,0:15:36.79:222,37,0	1/1:25,2:27:35.71:354,36,0	1/1:2,0:2:2.69:8,3,0	1/1:6,0:6:11.67:68,12,0	1/1:4,0:4:5.77:31,6,0	./.	1/1:11,0:11:17.34:113,17,0	1/1:7,0:7:12.49:63,12,0	1/1:21,0:20:11.33:94,11,0	1/1:18,0:16:7.35:124,7,0
chr10	82957978	.	AC	A	4298.42	PASS	AC=46;AF=0.920;AN=50;BaseQRankSum=-3.054;DP=295;FS=35.414;HRun=1;HaplotypeScore=48.9937;InbreedingCoeff=0.5480;MQ=60.90;MQ0=6;MQRankSum=-2.993;QD=17.26;ReadPosRankSum=-0.357;VQSLOD=2.9173;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,17:26:66.32:794,66,0	1/1:6,0:6:3.44:21,3,0	0/0:31,0:20:20.80:0,21,385	0/0:13,0:8:7.70:0,8,102	1/1:10,0:9:8.06:40,8,0	1/1:14,0:11:8.97:44,9,0	1/1:1,6:7:15.02:176,15,0	1/1:14,12:24:52.11:670,52,0	./.	1/1:12,0:11:22.02:138,22,0	1/1:8,0:7:8.85:56,9,0	1/1:5,0:4:11.76:72,12,0	1/1:5,0:4:5.92:39,6,0	1/1:4,0:4:9.33:58,9,0	1/1:7,0:4:8.86:57,9,0	1/1:4,0:1:2.96:19,3,0	1/1:5,0:4:5.36:33,5,0	./.	1/1:1,13:14:38.92:447,39,0	1/1:12,15:27:63.85:770,64,0	1/1:2,0:2:5.19:27,5,0	1/1:6,0:6:11.80:74,12,0	1/1:4,0:4:5.87:35,6,0	./.	1/1:11,0:11:21.70:147,22,0	1/1:7,0:7:15.99:97,16,0	1/1:2,19:20:24.35:331,24,0	1/1:17,0:16:24.60:152,25,0
chr10	82958000	.	AC	A	1398.47	PASS	AB=0.571;AC=37;AF=0.685;AN=54;BaseQRankSum=-0.927;DP=296;FS=14.743;HRun=3;HaplotypeScore=59.3295;InbreedingCoeff=0.7528;MQ=73.22;MQ0=4;MQRankSum=0.012;QD=11.75;ReadPosRankSum=-6.141;VQSLOD=-0.6751;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:81.19:0,81,1098	1/1:3,0:3:2.97:26,3,0	0/0:19,0:12:35.20:0,35,362	0/0:13,0:10:8.40:0,8,222	1/1:10,0:11:12.16:116,12,0	1/1:10,0:8:9.67:97,10,0	0/0:9,0:9:18.06:0,18,253	0/0:40,0:40:99:0,111,1387	1/1:1,0:1:0.89:2,1,0	1/1:4,0:4:3.48:31,3,0	1/1:12,0:12:23.76:190,24,0	1/1:7,0:7:11.90:95,12,0	1/1:6,0:6:17.85:138,18,0	1/1:4,0:4:7.36:69,7,0	1/1:8,0:8:17.54:151,18,0	1/1:2,0:2:3:27,3,0	1/1:6,0:6:11.97:102,12,0	1/1:4,0:4:11.58:83,12,0	0/0:21,0:21:56.61:0,57,695	0/0:29,0:29:84.15:0,84,1053	1/1:6,0:6:10.53:75,11,0	1/1:1,4:5:5.93:40,6,0	0/1:2,6:8:0.16:0,0,0	./.	1/1:9,0:9:15.92:142,16,0	1/1:10,0:10:21.85:181,22,0	0/0:14,0:14:24.03:0,24,294	1/1:3,0:3:0.73:21,1,0
chr10	82959318	.	C	CT	318.22	PASS	AB=1.000;AC=21;AF=0.808;AN=26;BaseQRankSum=2.379;DP=48;FS=28.388;HRun=0;HaplotypeScore=21.1504;InbreedingCoeff=0.2553;MQ=104.88;MQ0=2;MQRankSum=-0.502;QD=9.94;ReadPosRankSum=-3.950;VQSLOD=1.1974;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,1:1:3.01:36,3,0	0/1:9,0:7:3.54:4,0,193	0/0:13,0:10:23.56:0,24,290	./.	1/1:0,5:5:6.01:61,6,0	./.	0/0:1,0:1:0:0,0,0	./.	./.	1/1:0,2:2:6.02:66,6,0	1/1:0,1:1:3:26,3,0	1/1:0,3:3:3.01:35,3,0	./.	1/1:1,0:1:2.98:21,3,0	./.	./.	./.	1/1:0,2:2:5.38:41,5,0	1/1:0,2:2:6.01:64,6,0	./.	./.	1/1:0,3:3:3.01:30,3,0	./.	./.	1/1:2,1:3:2.94:30,3,0	./.	./.
chr10	82962020	.	T	TC	32551.09	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.367;DP=805;FS=0.541;HRun=1;HaplotypeScore=110.1077;InbreedingCoeff=0.9989;MQ=86.51;MQ0=0;MQRankSum=-11.678;QD=43.46;ReadPosRankSum=7.022;VQSLOD=3.7020;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:90.31:1438,90,0	1/1:0,8:8:24.08:382,24,0	0/0:25,0:25:48.02:0,48,754	0/0:30,0:31:87.26:0,87,1173	1/1:0,34:34:93.32:1486,93,0	1/1:0,26:26:72.25:1151,72,0	1/1:3,15:18:45.11:690,45,0	1/1:2,31:33:96.30:1482,96,0	1/1:1,25:26:72.25:1142,72,0	1/1:0,34:34:99:1580,102,0	1/1:2,23:25:69.23:1088,69,0	1/1:1,37:38:99:1582,99,0	1/1:0,32:32:93.32:1486,93,0	1/1:0,36:36:96.33:1534,96,0	1/1:1,37:38:99:1630,102,0	1/1:0,33:33:90.31:1439,90,0	1/1:0,34:34:87.13:1356,87,0	1/1:0,15:15:45.15:719,45,0	1/1:3,12:16:45.13:684,45,0	1/1:1,35:36:99:1542,99,0	1/1:0,43:43:99:1822,114,0	1/1:1,25:26:66.23:1054,66,0	1/1:0,30:30:81.07:1294,81,0	1/1:1,24:25:69.24:1103,69,0	1/1:0,34:34:93.32:1487,93,0	1/1:0,26:26:78.25:1224,78,0	1/1:0,36:35:93.32:1485,93,0	1/1:0,15:15:42.14:671,42,0
chr10	82962364	.	CTCTA	C	5838.54	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.934;DP=653;FS=5.618;HRun=0;HaplotypeScore=155.8625;InbreedingCoeff=0.9965;MQ=77.27;MQ0=0;MQRankSum=-10.172;QD=42.62;ReadPosRankSum=-0.389;VQSLOD=5.0907;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:29:54.14:971,54,0	0/0:5,0:5:15.05:0,15,390	0/0:19,0:19:50.36:0,50,1078	0/0:12,0:12:30.04:0,30,602	0/0:32,0:32:93.32:0,93,2437	0/0:24,0:24:72.25:0,72,1855	1/1:0,12:12:30.10:555,30,0	1/1:6,24:30:72.21:1242,72,0	0/0:25,0:25:69.22:0,69,1773	0/0:29,0:29:84.29:0,84,2193	0/0:29,0:29:78.27:0,78,2033	0/0:21,0:21:60.19:0,60,1530	0/0:26,0:26:69.22:0,69,1721	0/0:23,0:23:69.24:0,69,1821	0/0:26,0:26:75.26:0,75,1957	0/0:30,0:29:87.30:0,87,2267	0/0:33,0:33:93.29:0,93,2382	0/0:16,0:15:42.14:0,42,1106	1/1:3,17:20:48.12:833,48,0	1/1:1,21:22:54.19:1007,54,0	0/0:25,0:25:60.21:0,60,1567	0/0:21,0:21:57.20:0,57,1467	0/0:34,0:34:93.30:0,93,2395	0/0:11,0:11:33.11:0,33,878	0/0:31,0:31:87.28:0,87,2209	0/0:29,0:29:81.27:0,81,2048	1/1:2,22:24:66.23:1231,66,0	0/0:15,0:15:42.13:0,42,1062
chr10	82962979	.	AACTAC	A	23885.35	PASS	AB=0.515;AC=39;AF=0.696;AN=56;BaseQRankSum=18.084;DP=634;FS=7.018;HRun=0;HaplotypeScore=183.6237;InbreedingCoeff=0.9042;MQ=79.60;MQ0=0;MQRankSum=-19.438;QD=58.83;ReadPosRankSum=5.915;VQSLOD=4.7839;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,3616	1/1:0,9:9:18.06:418,18,0	0/0:20,0:20:60.19:0,60,1856	0/0:28,0:28:81.28:0,81,2295	1/1:0,28:28:68.87:1564,69,0	1/1:0,19:19:54.18:1222,54,0	0/0:23,0:23:69.24:0,69,2198	0/0:33,0:33:96.33:0,96,3055	1/1:0,20:20:57.20:1325,57,0	1/1:0,29:29:87.25:1931,87,0	1/1:0,24:24:63.22:1462,63,0	1/1:0,36:36:96.33:2229,96,0	1/1:0,21:20:54.18:1191,54,0	1/1:1,20:21:54.19:1255,54,0	1/1:0,30:30:74.91:1742,75,0	1/1:0,36:36:99:2301,99,0	1/1:0,13:13:39.13:906,39,0	1/1:0,5:5:12.04:279,12,0	0/0:33,0:32:96.33:0,96,3024	0/0:25,0:25:75.26:0,75,2468	1/1:0,14:14:12.04:279,12,0	1/1:0,22:22:54.19:1254,54,0	1/1:0,20:20:57.20:1299,57,0	1/1:0,16:16:26.31:625,26,0	1/1:0,18:18:45.15:1046,45,0	0/1:1,16:16:51.79:999,0,52	0/0:28,0:28:84.29:0,84,2680	1/1:0,8:8:24.08:558,24,0
chr10	82963166	.	T	TAAAA	14219.57	PASS	AB=0.547;AC=43;AF=0.768;AN=56;BaseQRankSum=-7.894;DP=661;FS=0.000;HRun=10;HaplotypeScore=138.8253;InbreedingCoeff=0.6414;MQ=70.59;MQ0=0;MQRankSum=-7.031;QD=26.28;ReadPosRankSum=-2.833;VQSLOD=1.9063;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:31:15.84:0,16,40	1/1:6,8:14:24.08:560,24,0	0/0:24,0:22:43.52:0,44,527	0/0:12,0:12:6.40:0,6,232	1/1:12,7:21:53.34:823,53,0	1/1:7,15:23:30.10:677,30,0	0/0:3,0:24:20.36:0,20,61	0/1:12,0:47:43.53:44,0,118	1/1:8,10:20:24.08:534,24,0	1/1:9,21:34:77.88:1424,78,0	1/1:4,6:12:15.01:285,15,0	1/1:3,11:16:30.02:642,30,0	1/1:5,14:23:39.13:878,39,0	1/1:6,13:24:18.06:388,18,0	1/1:4,13:21:33.11:697,33,0	1/1:6,24:34:51.17:1186,51,0	1/1:5,18:23:45.10:1036,45,0	1/1:4,10:14:30.07:657,30,0	0/0:6,0:28:0.87:0,1,48	0/1:3,0:33:2.09:2,0,69	1/1:5,8:14:15.01:301,15,0	1/1:10,15:28:54.13:1047,54,0	1/1:7,8:16:21.07:458,21,0	1/1:3,7:12:21.54:462,22,0	1/1:8,13:23:30.10:625,30,0	1/1:11,18:35:81.85:1334,82,0	0/1:7,0:41:20.90:21,0,69	1/1:3,6:9:6.02:141,6,0
chr10	82963924	.	AC	A	2648.77	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-13.253;DP=562;FS=1.763;HRun=9;HaplotypeScore=91.7419;InbreedingCoeff=0.9690;MQ=74.35;MQ0=0;MQRankSum=2.030;QD=18.92;ReadPosRankSum=-3.477;VQSLOD=2.6043;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:60.03:549,60,0	0/0:13,0:12:29.78:0,30,218	0/0:21,0:20:56.81:0,57,538	0/0:16,0:16:28.97:0,29,274	0/0:19,1:19:12.46:0,12,265	0/0:30,0:30:85.56:0,86,600	1/1:1,12:13:27.01:247,27,0	1/1:10,27:37:77.85:704,78,0	0/0:13,0:13:34.54:0,35,269	0/0:22,0:22:6.55:0,7,254	0/0:21,0:21:44.32:0,44,317	0/0:24,0:24:25.99:0,26,283	0/0:17,0:17:34.49:0,34,267	0/0:24,0:24:65.23:0,65,486	0/0:26,0:26:60.95:0,61,419	0/0:28,0:28:45.36:0,45,405	0/0:21,0:21:56.39:0,56,391	0/0:14,0:14:18.48:0,18,226	1/1:4,16:20:54.03:493,54,0	1/1:5,14:19:39:357,39,0	0/0:13,0:13:27.89:0,28,201	0/0:15,0:15:41.48:0,41,289	0/0:20,0:20:59.33:0,59,443	0/0:19,0:19:50.36:0,50,343	0/0:15,0:15:35.32:0,35,227	0/0:22,0:22:56.78:0,57,417	1/1:7,21:28:25.41:486,25,0	0/0:8,0:8:14.31:0,14,90
chr10	82964237	.	C	CAAA	13153.39	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=9.281;DP=601;FS=9.577;HRun=4;HaplotypeScore=194.6490;InbreedingCoeff=0.9771;MQ=42.99;MQ0=10;MQRankSum=-6.522;QD=31.85;ReadPosRankSum=4.381;VQSLOD=1.9017;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:9.95:0,10,191	1/1:6,5:11:29.66:468,30,0	0/0:20,0:11:16.52:0,17,196	0/0:29,0:13:23.27:0,23,246	1/1:20,14:32:81.60:1321,82,0	1/1:14,7:20:51.06:795,51,0	0/0:13,0:13:21.27:0,21,290	0/0:31,0:30:70.39:0,70,809	1/1:6,3:9:24.35:334,24,0	1/1:21,9:29:80.79:1092,81,0	1/1:12,6:17:45.10:687,45,0	1/1:16,5:21:52.13:692,52,0	1/1:19,5:24:51.28:634,51,0	1/1:17,5:22:56.15:738,56,0	1/1:22,5:27:71.28:1033,71,0	1/1:24,2:25:56.05:690,56,0	1/1:16,4:19:19.21:559,19,0	1/1:16,1:16:27.88:317,28,0	0/0:19,0:19:49.24:0,49,508	0/0:25,0:25:58.39:0,58,661	1/1:7,1:8:14.96:162,15,0	1/1:10,1:12:30.01:411,30,0	1/1:16,7:23:62.05:794,62,0	1/1:17,2:17:38.63:446,39,0	1/1:19,6:25:51.07:731,51,0	1/1:28,5:29:69.04:866,69,0	0/0:28,0:27:10.50:0,10,372	1/1:8,2:10:27.08:385,27,0
chr10	82964240	.	AAC	A	7341.88	PASS	AB=0.854;AC=38;AF=0.679;AN=56;BaseQRankSum=7.322;DP=597;FS=12.040;HRun=0;HaplotypeScore=200.1199;InbreedingCoeff=0.6611;MQ=41.95;MQ0=14;MQRankSum=-5.217;QD=17.32;ReadPosRankSum=6.495;VQSLOD=3.7867;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:24.04:0,24,353	0/1:9,3:11:7.49:242,0,7	0/1:20,0:10:5.90:6,0,191	0/0:30,0:13:12.65:0,13,244	1/1:26,5:29:39.09:572,39,0	0/1:18,4:20:3.40:333,0,3	0/0:13,0:13:27.08:0,27,372	0/0:30,0:29:60.85:0,61,967	1/1:8,2:10:20.67:179,21,0	1/1:25,6:30:45.99:661,46,0	1/1:14,4:17:42.89:413,43,0	1/1:18,3:20:43.47:416,43,0	1/1:12,12:24:38.05:444,38,0	1/1:18,5:23:53.98:488,54,0	1/1:23,3:26:33.33:388,33,0	1/1:20,7:26:12.55:413,13,0	0/1:14,6:19:13.69:295,0,14	1/1:10,3:12:1.54:209,2,0	0/0:22,0:21:49.60:0,50,683	0/0:25,0:25:59.73:0,60,763	1/1:5,2:7:14.58:158,15,0	1/1:9,4:13:11.84:214,12,0	1/1:18,5:23:35.58:478,36,0	1/1:9,8:15:20.64:233,21,0	1/1:17,7:24:7.63:408,8,0	1/1:22,9:27:23.46:612,23,0	0/0:30,0:29:10.83:0,11,439	1/1:8,3:10:16.09:180,16,0
chr10	82964241	.	AC	A	5222.73	PASS	AB=0.975;AC=33;AF=0.589;AN=56;BaseQRankSum=6.401;DP=592;FS=45.087;HRun=1;HaplotypeScore=200.1828;InbreedingCoeff=0.4887;MQ=42.98;MQ0=14;MQRankSum=-3.687;QD=12.86;ReadPosRankSum=8.364;VQSLOD=1.3148;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:22.30:0,22,278	1/1:12,0:11:9.11:135,9,0	0/0:18,0:8:1.39:0,1,136	0/0:30,0:13:20.52:0,21,242	1/1:33,0:31:20.43:396,20,0	0/1:21,1:20:11.76:203,0,12	0/0:12,0:12:25.71:0,26,371	0/0:29,0:28:50.05:0,50,921	1/1:10,0:10:12.36:129,12,0	1/1:29,2:30:15.94:372,16,0	1/1:19,0:18:41.18:321,41,0	1/1:21,0:20:32.90:318,33,0	1/1:24,0:24:32.69:362,33,0	1/1:22,0:22:54.12:398,54,0	1/1:26,0:26:19.26:328,19,0	0/1:27,0:26:14.59:287,0,15	0/1:19,1:19:59.99:210,0,60	1/1:14,0:13:9.15:160,9,0	0/0:22,0:21:20.94:0,21,585	0/0:23,0:23:46.12:0,46,764	1/1:7,0:7:13.55:129,14,0	0/1:13,0:13:14.50:104,0,15	1/1:21,1:22:17.72:364,18,0	0/1:17,0:15:2.50:173,0,2	0/1:25,0:25:0.27:284,0,0	1/1:30,0:26:6.67:406,7,0	0/0:30,0:29:13.57:0,14,398	0/1:10,1:10:4.60:145,0,5
chr10	82964246	.	AC	A	5001.43	PASS	AB=0.991;AC=40;AF=0.714;AN=56;BaseQRankSum=8.391;DP=608;FS=23.514;HRun=1;HaplotypeScore=205.9386;InbreedingCoeff=0.3161;MQ=41.76;MQ0=14;MQRankSum=-5.493;QD=9.62;ReadPosRankSum=6.742;VQSLOD=0.5337;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:7.11:0,7,108	1/1:12,0:11:7.97:98,8,0	0/1:19,0:9:34.39:34,0,100	0/1:25,1:10:31.27:31,0,72	1/1:34,0:32:42.13:403,42,0	1/1:24,0:22:16.51:233,17,0	0/0:12,0:12:16.79:0,17,122	0/0:27,0:26:39.12:0,39,303	1/1:10,0:10:21.99:163,22,0	1/1:30,1:30:31.64:363,32,0	1/1:21,1:21:41.86:327,42,0	1/1:22,0:21:42.78:326,43,0	1/1:23,1:24:36.61:362,37,0	1/1:22,0:22:52.37:415,52,0	1/1:25,0:25:36.77:318,37,0	1/1:27,1:27:5.06:207,5,0	0/1:21,0:20:1.13:178,0,1	0/1:14,0:13:4.14:106,0,4	0/1:20,0:19:9.11:9,0,217	0/0:24,0:24:13.45:0,13,304	1/1:11,0:11:12.56:110,13,0	0/1:14,0:14:19.30:76,0,19	1/1:20,1:21:19.06:336,19,0	1/1:16,0:14:15.55:144,16,0	1/1:27,0:27:7.30:262,7,0	0/1:30,1:27:1.61:334,0,2	0/1:34,0:32:14.98:15,0,143	1/1:12,0:11:12.08:150,12,0
chr10	82964247	.	C	CA	5077.26	PASS	AB=0.922;AC=49;AF=0.875;AN=56;BaseQRankSum=-1.272;DP=612;FS=6.275;HRun=6;HaplotypeScore=211.1806;InbreedingCoeff=0.2397;MQ=43.12;MQ0=13;MQRankSum=-1.966;QD=8.97;ReadPosRankSum=3.754;VQSLOD=1.2578;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:23:8.33:25,0,8	1/1:12,0:11:7.49:131,7,0	0/0:19,0:10:2:0,2,55	0/0:25,0:10:11.83:0,12,60	1/1:31,3:32:26.03:443,26,0	1/1:20,4:22:23.51:307,24,0	1/1:13,0:13:2.16:31,2,0	1/1:27,0:26:14.68:78,15,0	1/1:8,2:10:1.54:107,2,0	1/1:29,4:32:30.25:361,30,0	1/1:17,4:20:33.90:309,34,0	1/1:19,3:21:32.44:269,32,0	1/1:17,6:23:26.02:307,26,0	1/1:18,4:22:35.41:310,35,0	1/1:22,3:25:17.40:251,17,0	1/1:24,4:27:25.07:233,25,0	1/1:16,4:20:10.48:188,10,0	0/1:12,3:14:11.33:100,0,11	1/1:21,0:20:0.20:103,0,0	1/1:25,1:26:22.53:178,23,0	1/1:10,2:12:9.05:103,9,0	0/1:13,1:14:5.02:56,0,5	1/1:17,4:21:24.02:285,24,0	1/1:13,2:13:2.12:84,2,0	1/1:20,6:26:20.35:300,20,0	1/1:23,7:26:25.03:349,25,0	1/1:33,0:32:1.22:51,1,0	1/1:10,2:11:12.51:117,13,0
chr10	82964249	.	A	AC	4457.40	PASS	AB=0.802;AC=26;AF=0.464;AN=56;BaseQRankSum=8.109;DP=613;FS=42.348;HRun=0;HaplotypeScore=211.4862;InbreedingCoeff=-0.1560;MQ=43.15;MQ0=13;MQRankSum=-4.551;QD=9.93;ReadPosRankSum=6.884;VQSLOD=2.8515;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:22:3.31:3,0,80	0/1:7,5:11:69.49:184,0,69	0/0:20,0:11:13.86:0,14,148	0/0:27,0:11:16.31:0,16,139	0/1:20,14:32:6.62:556,0,7	1/1:18,8:24:1.25:339,1,0	0/0:13,0:13:27.09:0,27,197	0/0:26,0:25:53.23:0,53,305	0/1:7,3:10:19.50:153,0,20	0/1:23,11:33:70.52:407,0,71	1/1:17,6:22:30.73:339,31,0	0/1:17,5:21:48.52:236,0,49	0/1:19,5:24:58.77:215,0,59	0/1:18,5:23:18.69:246,0,19	0/1:20,5:25:30.79:281,0,31	0/1:25,3:27:74.92:87,0,75	0/1:16,4:20:66.94:179,0,67	0/1:15,1:15:60.18:61,0,60	0/0:19,0:18:25.16:0,25,222	0/0:23,0:24:31.24:0,31,241	1/1:11,1:12:12.94:65,13,0	0/1:12,1:14:42.50:96,0,43	0/1:14,6:21:9.12:268,0,9	0/1:12,2:12:29.46:86,0,29	1/1:19,6:25:15.49:282,15,0	0/1:23,6:25:38.27:246,0,38	0/0:33,0:32:35.03:0,35,248	1/1:9,3:11:9.12:128,9,0
chr10	82964251	.	A	AC	1938.73	PASS	AB=0.975;AC=30;AF=0.536;AN=56;BaseQRankSum=-0.027;DP=610;FS=62.338;HRun=0;HaplotypeScore=220.2572;InbreedingCoeff=-0.5954;MQ=43.52;MQ0=13;MQRankSum=0.804;QD=3.42;ReadPosRankSum=2.248;VQSLOD=0.9602;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:21:57.50:58,0,66	0/1:10,0:10:21.83:41,0,22	0/0:20,0:11:16.46:0,16,176	0/0:23,0:9:17.55:0,18,151	0/1:34,0:32:73.15:73,0,105	1/1:26,0:24:3.85:73,4,0	0/1:13,0:13:48.71:49,0,102	1/1:22,3:25:3.66:338,4,0	0/1:10,0:10:5.04:5,0,53	0/1:33,0:33:86.07:86,0,88	0/1:23,0:22:55.82:66,0,56	0/1:22,0:22:14.14:14,0,125	0/1:26,0:26:87.79:88,0,99	0/1:21,0:23:40.37:40,0,102	0/1:25,0:25:63.73:64,0,125	0/1:25,0:26:40.63:41,0,45	0/1:21,0:20:36.16:36,0,92	0/1:15,0:15:32.62:33,0,44	0/1:15,3:17:11.05:198,0,11	1/1:8,16:25:0.06:344,0,0	0/1:6,0:12:6.74:19,0,7	0/1:12,1:13:4.42:4,0,53	0/1:19,0:21:3.83:62,0,4	0/1:13,0:12:13.23:13,0,63	1/1:24,0:25:2.82:99,3,0	0/1:30,0:26:74.99:91,0,75	0/1:18,11:34:99:116,0,103	0/1:12,0:11:37.33:40,0,37
chr10	82964252	.	AAC	A	7840.65	PASS	AB=0.870;AC=49;AF=0.875;AN=56;BaseQRankSum=-5.851;DP=603;FS=21.405;HRun=0;HaplotypeScore=203.8424;InbreedingCoeff=-0.1435;MQ=43.17;MQ0=13;MQRankSum=2.067;QD=13.00;ReadPosRankSum=-1.556;VQSLOD=3.1172;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:19:6.25:73,6,0	0/1:9,2:10:16.71:123,0,17	0/1:21,0:11:56.93:57,0,59	0/1:23,0:9:44.93:46,0,45	0/1:24,10:32:29.54:446,0,30	0/1:15,11:24:9.10:287,0,9	1/1:12,0:12:14.45:68,14,0	1/1:26,1:26:61.08:499,61,0	0/1:9,2:11:2.77:124,0,3	1/1:22,11:32:39.22:545,39,0	1/1:15,8:22:27.77:361,28,0	0/1:21,2:22:2.50:281,0,3	1/1:25,1:26:33.61:277,34,0	1/1:21,2:23:16.95:347,17,0	1/1:18,7:25:54.32:539,54,0	1/1:24,3:26:23.66:327,24,0	1/1:15,5:19:17.84:289,18,0	1/1:7,9:15:7.71:220,8,0	1/1:17,0:16:40.35:272,40,0	1/1:25,0:25:46.79:325,47,0	1/1:10,2:12:5.04:73,5,0	1/1:6,6:12:25.25:331,25,0	1/1:15,6:21:8.64:394,9,0	1/1:10,4:12:12.95:201,13,0	1/1:13,12:25:30.77:354,31,0	1/1:18,11:25:32.25:454,32,0	1/1:34,0:32:46.86:322,47,0	1/1:9,3:11:14.09:205,14,0
chr10	82964253	.	AC	A	7669.39	PASS	AB=0.921;AC=53;AF=0.946;AN=56;BaseQRankSum=-5.020;DP=595;FS=14.828;HRun=1;HaplotypeScore=196.1006;InbreedingCoeff=-0.0533;MQ=43.24;MQ0=13;MQRankSum=2.164;QD=12.89;ReadPosRankSum=-1.016;VQSLOD=2.1887;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,2:19:17.01:145,17,0	0/1:9,0:8:0.23:82,0,0	0/1:17,4:11:61.69:73,0,62	0/1:22,2:9:39.74:40,0,50	1/1:32,1:31:17.45:346,17,0	1/1:26,0:24:19.36:234,19,0	1/1:12,0:12:25.14:140,25,0	1/1:27,0:26:65.02:482,65,0	1/1:11,0:11:7.01:140,7,0	1/1:31,1:31:56.52:468,57,0	1/1:21,2:22:40.70:314,41,0	1/1:21,2:22:23.31:319,23,0	1/1:25,0:25:53.36:317,53,0	1/1:23,0:23:43.10:424,43,0	1/1:24,2:26:72.74:525,73,0	1/1:23,3:25:46.18:344,46,0	1/1:17,2:18:26.63:275,27,0	1/1:16,0:15:13.73:169,14,0	1/1:17,0:16:43.31:333,43,0	1/1:25,0:25:64.77:425,65,0	1/1:12,0:12:12.35:72,12,0	1/1:12,0:12:30.93:243,31,0	1/1:20,1:21:35.72:347,36,0	1/1:11,2:11:25.80:210,26,0	1/1:25,0:25:45.20:289,45,0	1/1:27,1:24:46.55:371,47,0	1/1:32,1:31:51.69:346,52,0	1/1:11,1:11:25.60:198,26,0
chr10	82964264	.	A	AAAAAC	13179.65	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=4.694;DP=617;FS=16.717;HRun=0;HaplotypeScore=235.9524;InbreedingCoeff=0.7012;MQ=48.02;MQ0=13;MQRankSum=-6.266;QD=28.04;ReadPosRankSum=2.748;VQSLOD=3.3396;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:23:58.02:58,0,74	1/1:8,1:8:23.48:307,23,0	0/0:19,0:9:3.85:0,4,103	0/0:25,0:10:3.81:0,4,101	1/1:29,4:34:92.58:1077,93,0	1/1:26,2:26:50.71:737,51,0	0/1:11,0:11:11.10:11,0,29	0/0:25,0:24:34.94:0,35,282	1/1:11,0:11:21.07:289,21,0	1/1:29,4:33:79.26:1104,79,0	1/1:25,3:27:69.51:942,70,0	1/1:23,0:23:56.42:808,56,0	1/1:16,2:20:50.94:769,51,0	1/1:23,0:25:66.16:1004,66,0	1/1:22,4:30:80.59:1181,81,0	1/1:13,1:24:31.56:538,32,0	1/1:15,1:18:39.03:451,39,0	1/1:13,1:13:17.85:227,18,0	0/0:18,0:17:14.21:0,14,148	0/0:25,0:25:2.76:0,3,176	1/1:15,0:15:14.78:143,15,0	1/1:10,2:14:36.09:568,36,0	1/1:23,0:23:62.52:732,63,0	1/1:13,1:12:30.77:356,31,0	1/1:18,3:22:36.56:585,37,0	1/1:26,2:24:57.90:836,58,0	0/0:35,0:34:13.46:0,13,269	1/1:12,1:15:35.69:457,36,0
chr10	82964424	.	CT	C	5645.66	PASS	AB=0.514;AC=11;AF=0.196;AN=56;BaseQRankSum=9.461;DP=610;FS=2.560;HRun=1;HaplotypeScore=59.9403;InbreedingCoeff=0.9165;MQ=57.13;MQ0=3;MQRankSum=2.014;QD=36.90;ReadPosRankSum=1.036;VQSLOD=5.1387;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:44:99:1717,123,0	0/0:4,0:4:12.04:0,12,189	0/0:19,0:12:23.53:0,24,398	0/0:34,0:14:39.12:0,39,582	0/0:27,0:27:75.24:0,75,1172	0/0:25,0:24:69.17:0,69,1051	1/1:0,20:20:48.16:671,48,0	1/1:0,34:34:99:1389,102,0	0/0:14,0:14:42.14:0,42,669	0/0:20,0:19:57.19:0,57,911	0/0:15,0:15:42.14:0,42,669	0/0:21,0:21:60.20:0,60,957	0/0:14,0:14:36.12:0,36,575	0/0:23,0:23:66.21:0,66,1029	0/0:31,0:31:81.25:0,81,1249	0/0:22,0:22:57.17:0,57,863	0/0:31,0:30:84.27:0,84,1320	0/0:23,0:23:63.17:0,63,979	0/1:1,17:17:2.84:526,0,3	1/1:0,11:11:33.11:461,33,0	0/0:50,0:50:99:0,150,2371	0/0:7,0:7:21.07:0,21,336	0/0:16,0:16:45.15:0,45,719	0/0:14,0:14:33.11:0,33,528	0/0:16,0:16:45.15:0,45,719	0/0:26,0:25:72.25:0,72,1151	1/1:0,26:26:63.21:880,63,0	0/0:5,0:5:15.05:0,15,240
chr10	82964811	.	A	AAAAAAAAAC	14974.21	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=3.843;DP=487;FS=10.227;HRun=0;HaplotypeScore=199.1653;InbreedingCoeff=0.8562;MQ=60.93;MQ0=10;MQRankSum=-5.988;QD=43.66;ReadPosRankSum=0.074;VQSLOD=3.7081;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:66.58:0,67,859	1/1:11,1:12:36.09:926,36,0	0/0:23,0:13:11.12:0,11,44	0/1:18,0:5:5.81:6,0,8	1/1:27,0:27:62.84:1171,63,0	1/1:21,0:21:41.61:906,42,0	0/0:8,0:8:2.11:0,2,183	0/0:27,0:27:37.05:0,37,540	1/1:10,0:9:24:585,24,0	1/1:18,0:17:29.01:792,29,0	1/1:19,1:20:45.06:1015,45,0	1/1:13,0:12:15.02:406,15,0	1/1:17,0:17:30.01:664,30,0	1/1:14,1:14:32.98:682,33,0	1/1:23,0:22:50.89:1222,51,0	1/1:22,1:23:28.03:1413,28,0	1/1:18,0:17:32.72:474,33,0	1/1:14,0:13:21.03:510,21,0	0/0:19,0:17:10.67:0,11,426	0/0:19,0:18:35.81:0,36,446	1/1:6,0:6:11.93:157,12,0	1/1:11,1:12:36.05:827,36,0	1/1:21,0:21:60:1262,60,0	1/1:6,0:5:5.91:81,6,0	1/1:20,0:20:57.03:1041,57,0	1/1:21,0:20:33.93:540,34,0	0/0:21,0:21:55.15:0,55,866	1/1:7,0:7:17.18:295,17,0
chr10	82964818	.	A	AAC	2939.40	PASS	AB=0.853;AC=21;AF=0.375;AN=56;BaseQRankSum=1.704;DP=490;FS=54.254;HRun=0;HaplotypeScore=144.4819;InbreedingCoeff=-0.4860;MQ=50.63;MQ0=11;MQRankSum=-3.127;QD=9.02;ReadPosRankSum=5.419;VQSLOD=0.7639;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:71.60:0,72,543	0/1:9,3:12:87.61:134,0,88	0/0:22,0:8:2.18:0,2,66	0/0:18,0:4:8.38:0,8,39	0/1:23,5:28:99:136,0,179	0/1:14,10:23:99:170,0,164	0/0:9,0:9:5.02:0,5,156	0/0:33,0:33:76.42:0,76,579	0/1:8,2:10:23.37:164,0,23	0/1:13,3:16:70.35:204,0,70	0/1:13,4:19:75.63:294,0,76	0/1:3,8:10:11.89:174,0,12	0/1:12,2:15:89.98:95,0,90	0/1:10,3:12:55.42:183,0,55	0/1:18,6:23:99:272,0,159	0/1:22,0:22:99:206,0,167	0/1:16,3:18:53.88:202,0,54	0/1:11,3:13:2.03:198,0,2	0/0:16,0:14:34.90:0,35,306	0/0:16,0:15:41.51:0,42,300	0/1:6,0:6:34.33:51,0,34	0/1:12,0:12:77.05:77,0,141	0/1:20,2:22:99:291,0,140	1/1:3,3:5:0.56:41,1,0	0/1:17,1:20:99:126,0,124	0/1:22,0:20:39.83:40,0,156	0/0:24,0:24:71.57:0,72,554	0/1:9,0:9:37.36:37,0,61
chr10	82964819	.	A	AC	323.33	PASS	AB=0.974;AC=13;AF=0.232;AN=56;BaseQRankSum=5.658;DP=490;FS=56.863;HRun=0;HaplotypeScore=144.6882;InbreedingCoeff=-0.2027;MQ=50.48;MQ0=12;MQRankSum=-5.618;QD=1.69;ReadPosRankSum=5.856;VQSLOD=0.3787;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:70.88:0,71,482	0/0:12,0:12:3.34:0,3,107	0/1:23,0:8:5.50:6,0,32	0/0:18,0:4:2.08:0,2,26	0/0:29,0:29:37.77:0,38,304	0/0:22,0:21:3.64:0,4,169	0/0:11,0:11:24.85:0,25,162	0/0:33,0:33:78.95:0,79,562	0/1:10,0:9:22.10:22,0,52	0/0:17,0:16:5.92:0,6,151	0/1:18,0:18:31.41:31,0,102	0/1:11,0:10:22.25:29,0,22	0/0:15,0:15:6.57:0,7,119	0/1:13,0:12:23.75:24,0,62	0/1:24,0:23:28.97:29,0,177	0/0:22,0:22:13.96:0,14,216	0/0:19,0:18:0.33:0,0,90	0/1:13,0:12:10.46:35,0,10	0/0:16,0:14:35.21:0,35,286	0/0:17,0:15:32.88:0,33,250	0/0:6,0:6:8.85:0,9,53	0/0:12,0:12:15.17:0,15,163	0/1:22,0:22:4.92:5,0,194	1/1:6,0:5:2.26:17,2,0	0/1:20,0:20:7.40:7,0,197	0/1:17,5:20:99:186,0,114	0/0:24,0:24:70.74:0,71,488	0/1:8,1:9:66.33:74,0,66
chr10	82964824	.	AAAAC	A	1450.01	PASS	AB=0.986;AC=20;AF=0.357;AN=56;BaseQRankSum=-5.268;DP=500;FS=0.000;HRun=0;HaplotypeScore=166.8220;InbreedingCoeff=-0.3965;MQ=51.58;MQ0=12;MQRankSum=-1.830;QD=4.38;ReadPosRankSum=-6.057;VQSLOD=0.1657;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.86:0,64,1156	0/1:12,0:12:10.88:11,0,104	0/0:22,0:8:3.92:0,4,110	0/1:21,0:6:8.80:9,0,23	0/1:29,1:30:99:117,0,193	0/1:20,0:19:45.75:46,0,167	0/0:10,0:10:30.08:0,30,599	0/0:32,0:32:74.72:0,75,1504	0/1:10,0:9:78.84:79,0,92	0/1:17,3:19:99:163,0,117	0/1:18,0:18:72.72:73,0,185	0/0:11,0:10:10.92:0,11,108	0/1:15,0:15:70.51:71,0,152	0/1:14,0:13:72.91:96,0,73	0/1:27,0:26:86.53:87,0,172	0/1:21,0:21:88.66:89,0,269	0/1:21,0:20:50.27:79,0,50	0/1:14,0:13:5.69:6,0,83	0/0:16,0:14:37.37:0,37,708	0/0:19,0:17:51.11:0,51,854	1/1:6,0:6:3.83:52,4,0	0/1:12,0:12:53.72:54,0,73	0/1:19,1:20:7.41:306,0,7	0/1:7,0:6:1.39:1,0,27	0/1:19,1:20:99:168,0,183	0/1:23,0:21:99:101,0,235	0/0:27,0:27:77.94:0,78,1231	0/0:8,0:8:11.72:0,12,155
chr10	82964826	.	AAC	A	4337.40	PASS	AB=0.985;AC=25;AF=0.446;AN=56;BaseQRankSum=0.535;DP=505;FS=0.759;HRun=0;HaplotypeScore=142.7166;InbreedingCoeff=-0.0815;MQ=51.79;MQ0=12;MQRankSum=-6.787;QD=12.99;ReadPosRankSum=-1.030;VQSLOD=4.6757;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.54:0,61,620	1/1:12,0:12:0.55:211,1,0	0/0:20,0:8:12.54:0,13,65	0/0:22,0:6:7.85:0,8,44	0/1:31,0:31:17.07:525,0,17	0/1:19,0:18:37.87:274,0,38	0/0:11,0:11:23.79:0,24,400	0/0:31,0:31:74.40:0,74,994	0/1:11,0:10:2.44:116,0,2	0/1:22,0:21:14.73:315,0,15	0/1:18,1:19:10.19:243,0,10	0/1:10,0:9:36.49:39,0,36	0/1:14,1:15:35.95:162,0,36	0/1:13,0:12:12.55:125,0,13	0/1:25,2:26:40.06:393,0,40	0/1:21,0:21:60.27:132,0,60	1/1:22,0:21:22.32:234,22,0	0/1:14,0:13:18.19:70,0,18	0/0:16,0:14:22.42:0,22,471	0/0:19,0:17:50.75:0,51,533	1/1:6,0:6:13.02:103,13,0	1/1:12,0:12:25.69:278,26,0	1/1:20,0:20:55.89:512,56,0	0/1:7,0:6:8.28:22,0,8	0/1:20,1:21:47.87:226,0,48	0/1:24,0:22:22.44:309,0,22	0/0:27,0:27:62.08:0,62,741	0/1:8,0:8:21.08:47,0,21
chr10	82964827	.	AC	A	6058.06	PASS	AB=0.830;AC=36;AF=0.643;AN=56;BaseQRankSum=0.042;DP=504;FS=4.505;HRun=1;HaplotypeScore=129.6710;InbreedingCoeff=0.6150;MQ=51.95;MQ0=12;MQRankSum=-5.800;QD=17.16;ReadPosRankSum=0.684;VQSLOD=5.1182;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:35.32:0,35,688	1/1:6,6:12:24.91:318,25,0	0/0:20,1:8:8.24:0,8,38	0/1:20,2:6:0.63:1,0,4	1/1:16,14:30:25.75:702,26,0	1/1:10,9:18:4.18:425,4,0	0/0:12,0:12:35.60:0,36,391	0/0:31,0:31:74.56:0,75,927	1/1:10,1:10:24.53:155,25,0	1/1:16,7:22:23.46:443,23,0	1/1:16,4:20:27.66:350,28,0	0/1:9,1:9:3.38:90,0,3	0/1:10,5:15:10.91:187,0,11	1/1:8,3:10:7.97:172,8,0	1/1:19,8:26:24:482,24,0	1/1:15,7:22:42.57:367,43,0	1/1:11,9:19:41.41:340,41,0	0/1:11,2:12:3.47:93,0,3	0/0:16,0:14:22.71:0,23,445	0/0:19,0:17:50.74:0,51,548	1/1:4,2:6:13.10:110,13,0	1/1:4,8:12:35.48:380,35,0	1/1:8,12:20:56.02:571,56,0	1/1:6,1:6:3.03:26,3,0	0/1:16,5:21:0.92:300,0,1	1/1:16,8:22:18.80:443,19,0	0/0:28,0:28:52.43:0,52,766	0/1:5,3:8:2.15:103,0,2
chr10	82964828	.	C	CAAAAA	5325.65	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=8.543;DP=506;FS=14.206;HRun=6;HaplotypeScore=172.4543;InbreedingCoeff=0.6918;MQ=50.93;MQ0=12;MQRankSum=-6.475;QD=15.99;ReadPosRankSum=1.635;VQSLOD=0.8310;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.10:0,63,939	1/1:10,2:12:30.72:333,31,0	0/0:20,0:7:1.62:0,2,24	0/0:19,0:6:8.46:0,8,47	1/1:29,1:30:62.65:627,63,0	1/1:19,0:18:30.28:308,30,0	0/0:13,0:13:35.71:0,36,404	0/0:30,0:30:63.32:0,63,881	1/1:10,1:10:1.85:197,2,0	1/1:23,0:22:26.16:359,26,0	1/1:20,0:20:14.96:474,15,0	1/1:10,0:9:19.48:222,19,0	1/1:15,0:15:7.11:147,7,0	1/1:12,0:11:7.93:139,8,0	1/1:27,0:26:54.44:508,54,0	0/1:22,0:22:89.90:90,0,99	1/1:20,0:19:17.83:400,18,0	1/1:12,1:12:17.48:283,17,0	0/0:17,0:15:19.82:0,20,542	0/0:19,0:17:47.97:0,48,621	1/1:6,0:6:8.77:53,9,0	1/1:12,0:12:17.91:148,18,0	1/1:20,0:20:43.42:258,43,0	1/1:7,0:6:8.99:64,9,0	0/1:21,0:21:22.29:200,0,22	1/1:24,0:22:34.79:316,35,0	0/0:28,0:28:69.10:0,69,985	1/1:8,1:9:3.98:198,4,0
chr10	82964834	.	AC	A	2953.86	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=7.958;DP=509;FS=11.261;HRun=1;HaplotypeScore=139.2435;InbreedingCoeff=0.6882;MQ=54.74;MQ0=11;MQRankSum=-5.924;QD=7.84;ReadPosRankSum=1.476;VQSLOD=-0.0839;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:17.07:0,17,91	1/1:11,0:11:27.09:121,27,0	0/0:18,0:7:5.11:0,5,31	0/1:24,0:8:6.97:7,0,27	1/1:29,1:30:61.48:344,61,0	1/1:19,0:18:36.79:169,37,0	0/0:13,0:13:13.15:0,13,132	0/0:30,0:30:34.54:0,35,271	1/1:11,0:10:3.18:68,3,0	1/1:23,1:23:30.90:156,31,0	1/1:17,0:17:37.43:189,37,0	1/1:11,0:10:15.95:69,16,0	1/1:13,2:15:22.96:119,23,0	1/1:10,0:9:17.26:110,17,0	1/1:26,2:27:53.94:280,54,0	1/1:24,0:24:42.80:315,43,0	1/1:20,2:21:33.93:186,34,0	1/1:14,0:13:15.71:79,16,0	0/1:17,0:15:18.61:19,0,83	0/0:19,0:17:27.26:0,27,132	1/1:6,0:6:10.57:53,11,0	0/1:10,0:10:0.56:88,0,1	1/1:21,1:22:49.09:251,49,0	1/1:6,0:5:3.81:22,4,0	1/1:20,0:20:34.66:169,35,0	1/1:23,0:21:46.97:261,47,0	0/0:28,0:28:32.11:0,32,136	1/1:13,0:13:15.90:65,16,0
chr10	82964835	.	CA	C	4007.76	PASS	AB=0.705;AC=41;AF=0.732;AN=56;BaseQRankSum=-7.700;DP=507;FS=25.680;HRun=10;HaplotypeScore=134.4551;InbreedingCoeff=-0.1126;MQ=54.73;MQ0=11;MQRankSum=0.456;QD=8.60;ReadPosRankSum=5.264;VQSLOD=0.4020;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:24:36.44:106,36,0	0/1:4,7:11:4.65:174,0,5	0/0:19,0:8:7.34:0,7,91	0/0:21,1:7:2.49:0,2,49	0/1:14,16:30:3.72:379,0,4	0/1:10,9:18:15.15:252,0,15	1/1:5,0:13:15.85:46,16,0	1/1:10,0:29:32.35:94,32,0	1/1:5,5:9:10.78:67,11,0	0/1:13,11:23:18.41:237,0,18	1/1:11,6:17:1.13:173,1,0	0/1:11,1:11:23.13:88,0,23	0/1:6,9:15:30.88:130,0,31	1/1:5,5:9:0.29:85,0,0	0/1:18,10:27:3.14:353,0,3	1/1:10,13:23:31.42:292,31,0	1/1:16,7:22:35.16:279,35,0	0/1:12,2:13:11.59:47,0,12	1/1:3,0:15:27.18:83,27,0	1/1:5,0:17:24.44:72,24,0	1/1:4,2:6:1.59:57,2,0	0/1:3,7:10:7:159,0,7	1/1:8,14:22:20.17:285,20,0	1/1:4,2:5:2.59:25,3,0	1/1:8,12:20:2.27:187,2,0	0/1:17,6:21:41.31:141,0,41	1/1:2,0:28:42.78:125,43,0	0/1:4,9:13:8.89:69,0,9
chr10	82964836	.	A	AAAAAC	5977.39	PASS	AB=0.955;AC=36;AF=0.643;AN=56;BaseQRankSum=1.773;DP=507;FS=4.200;HRun=0;HaplotypeScore=159.8300;InbreedingCoeff=0.5428;MQ=54.73;MQ0=11;MQRankSum=-5.855;QD=17.74;ReadPosRankSum=1.776;VQSLOD=4.5131;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:59.25:0,59,643	1/1:12,0:12:32.91:399,33,0	0/0:20,0:9:4.88:0,5,79	0/0:22,0:7:1.93:0,2,92	1/1:28,2:30:7.23:643,7,0	1/1:17,2:18:49.08:515,49,0	0/0:12,0:12:27.34:0,27,195	0/0:28,0:28:36.95:0,37,425	0/1:9,1:9:6.32:196,0,6	1/1:22,1:23:8.91:394,9,0	1/1:14,2:17:11.57:524,12,0	1/1:10,2:11:23.82:323,24,0	1/1:15,0:15:20.51:127,21,0	1/1:10,0:9:10.82:130,11,0	1/1:26,2:27:45.25:599,45,0	0/1:23,0:23:60.94:61,0,202	1/1:21,2:22:20.65:431,21,0	1/1:9,1:13:10.94:193,11,0	0/0:17,0:15:17.48:0,17,395	0/0:19,0:17:37.59:0,38,369	1/1:6,0:6:10.47:94,10,0	0/1:10,0:10:33.78:243,0,34	1/1:21,1:22:1.73:318,2,0	1/1:6,0:5:6.22:38,6,0	0/1:18,1:20:24.36:226,0,24	1/1:22,1:21:7.03:313,7,0	0/0:28,0:28:61.40:0,61,666	1/1:13,0:13:7.74:209,8,0
chr10	82964845	.	AC	A	888.92	PASS	AB=0.968;AC=23;AF=0.411;AN=56;BaseQRankSum=7.414;DP=488;FS=1.324;HRun=1;HaplotypeScore=133.4324;InbreedingCoeff=-0.3888;MQ=62.21;MQ0=5;MQRankSum=-9.379;QD=2.55;ReadPosRankSum=4.681;VQSLOD=-0.2227;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:26.22:0,26,151	0/1:12,0:12:23.37:33,0,23	0/1:21,1:12:4.46:4,0,99	0/0:22,0:10:2.50:0,2,97	0/1:30,2:32:82.62:197,0,83	0/1:19,0:18:17.67:42,0,18	0/0:10,0:10:9.31:0,9,92	0/0:23,0:23:40.66:0,41,272	0/1:10,0:9:20.69:21,0,39	0/1:20,1:21:12.15:12,0,88	0/1:16,3:19:31.02:108,0,31	0/1:14,0:13:8.38:8,0,65	0/1:17,0:17:27.22:53,0,27	0/1:8,1:9:8.30:29,0,8	1/1:27,0:26:8.46:93,8,0	0/1:23,0:23:27.31:79,0,27	0/1:19,0:18:4.88:48,0,5	0/1:11,0:10:19.91:20,0,20	0/0:16,0:15:34.33:0,34,178	0/0:17,0:16:38.47:0,38,187	0/1:7,0:7:0.48:0,0,40	0/1:9,1:10:34.92:71,0,35	0/1:19,2:21:64.97:86,0,65	0/1:6,0:5:13.78:14,0,17	0/1:19,1:20:50.01:63,0,50	0/1:18,0:17:26.49:26,0,66	0/0:28,0:28:45.50:0,45,206	1/1:11,1:12:0.63:35,1,0
chr10	82965733	.	C	CACCCTTCCCT	10189.69	PASS	AC=36;AF=0.720;AN=50;BaseQRankSum=-3.167;DP=409;FS=15.669;HRun=0;HaplotypeScore=74.3172;InbreedingCoeff=0.8200;MQ=59.12;MQ0=0;MQRankSum=-8.353;QD=37.32;ReadPosRankSum=0.848;VQSLOD=3.2238;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,2693	1/1:1,0:1:3.01:40,3,0	0/0:12,0:8:16.70:0,17,257	0/0:5,0:4:4.37:0,4,210	1/1:0,6:10:14.98:267,15,0	1/1:1,11:12:15.05:818,15,0	0/0:40,0:40:99:0,117,2948	0/0:9,0:9:23.94:0,24,290	./.	1/1:0,10:16:38.80:1154,39,0	1/1:0,6:9:14.94:421,15,0	1/1:2,9:11:9.03:462,9,0	1/1:0,7:6:9.03:489,9,0	1/1:2,7:16:13.84:507,14,0	./.	1/1:0,4:6:6.02:280,6,0	1/1:2,13:21:21.07:1111,21,0	1/1:0,18:25:9.03:490,9,0	0/0:8,0:8:24.07:0,24,599	./.	1/1:4,28:54:18.10:524,18,0	1/1:6,1:7:20.85:410,21,0	1/1:0,1:1:3.01:37,3,0	1/1:0,14:25:17.99:718,18,0	1/1:0,10:16:15.05:811,15,0	1/1:0,8:10:27.08:1324,27,0	0/0:9,0:8:23.84:0,24,499	1/1:0,4:6:6.02:327,6,0
chr10	82967095	.	GT	G	454.99	PASS	AB=0.650;AC=1;AF=0.018;AN=56;BaseQRankSum=4.390;DP=642;FS=8.981;HRun=3;HaplotypeScore=70.5058;InbreedingCoeff=-0.0186;MQ=63.96;MQ0=1;MQRankSum=-0.094;QD=11.67;ReadPosRankSum=1.141;VQSLOD=1.1406;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.31:0,96,1364	0/0:9,0:9:27.09:0,27,389	0/0:13,0:12:32.87:0,33,384	0/0:16,0:16:29.92:0,30,371	0/0:20,0:20:54.17:0,54,759	0/0:16,0:16:45.14:0,45,630	0/0:25,0:25:75.22:0,75,1043	0/0:25,0:25:69.18:0,69,940	0/0:22,0:22:60.18:0,60,828	0/0:20,0:20:60.20:0,60,864	0/0:8,0:8:24.08:0,24,341	0/1:18,21:39:99:529,0,632	0/0:34,0:34:99:0,99,1399	0/0:35,0:35:93.26:0,93,1299	0/0:37,0:37:99:0,102,1450	0/0:38,0:37:99:0,108,1538	0/0:30,0:30:90.30:0,90,1296	0/0:16,0:15:45.15:0,45,648	0/0:21,0:21:63.20:0,63,889	0/0:14,0:14:39.13:0,39,561	0/0:44,0:44:99:0,120,1685	0/0:12,0:12:33.11:0,33,475	0/0:11,0:11:30.09:0,30,415	0/0:28,0:28:84.28:0,84,1195	0/0:16,0:16:48.16:0,48,681	0/0:23,0:23:66.22:0,66,950	0/0:31,0:31:87.29:0,87,1246	0/0:7,0:7:18.03:0,18,237
chr10	82967292	.	CT	C	1436.95	PASS	AB=0.934;AC=15;AF=0.268;AN=56;BaseQRankSum=-8.667;DP=591;FS=0.451;HRun=13;HaplotypeScore=82.6039;InbreedingCoeff=0.7088;MQ=60.61;MQ0=7;MQRankSum=2.365;QD=6.65;ReadPosRankSum=4.399;VQSLOD=2.5863;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,24:36:57.71:406,58,0	0/0:4,0:10:11.36:0,11,57	0/1:21,2:14:25.33:26,0,25	0/0:10,0:5:4.43:0,4,18	0/0:14,0:34:49.07:0,49,279	0/0:14,0:24:38.24:0,38,218	1/1:3,15:22:45.96:292,46,0	1/1:16,12:28:30:206,30,0	0/0:7,0:12:13.04:0,13,90	0/0:10,0:22:37.41:0,37,210	0/0:5,0:21:40.35:0,40,222	0/0:12,0:24:20.31:0,20,124	0/0:8,1:21:8.98:0,9,121	0/1:5,1:14:1.50:1,0,86	0/0:6,0:18:34.37:0,34,192	0/0:7,0:18:11.04:0,11,146	0/0:2,1:16:6.91:0,7,118	0/1:10,0:18:5.08:5,0,70	1/1:8,12:23:19.34:214,19,0	1/1:9,12:24:36.98:248,37,0	0/0:1,0:7:14.35:0,14,80	0/0:10,1:21:12.63:0,13,144	0/0:14,0:24:26.17:0,26,179	0/0:4,0:27:48.20:0,48,240	0/0:10,0:21:22.68:0,23,113	0/0:17,0:30:53.58:0,54,294	1/1:7,14:22:31.79:225,32,0	0/0:5,0:8:14.41:0,14,80
chr10	82968182	.	C	CA	15330.17	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-13.840;DP=633;FS=2.221;HRun=2;HaplotypeScore=61.7607;InbreedingCoeff=0.9811;MQ=84.82;MQ0=0;MQRankSum=-2.758;QD=37.76;ReadPosRankSum=4.282;VQSLOD=5.4534;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,1769	1/1:0,2:2:6.02:86,6,0	0/0:18,0:18:48.14:0,48,577	0/0:24,0:24:61.04:0,61,701	1/1:1,23:24:69.23:994,69,0	1/1:0,18:18:45.15:647,45,0	0/0:20,0:20:60.16:0,60,717	0/0:32,0:32:87.23:0,87,1027	1/1:0,19:19:57.19:821,57,0	1/1:2,13:15:39.11:541,39,0	1/1:1,13:14:36.12:519,36,0	1/1:2,21:23:57.19:821,57,0	1/1:1,24:25:69.23:988,69,0	1/1:2,28:30:81.27:1166,81,0	1/1:0,38:37:99:1598,111,0	1/1:3,19:22:54.18:777,54,0	1/1:1,40:41:99:1598,111,0	1/1:2,13:15:37.80:559,38,0	0/0:24,0:24:63.19:0,63,769	0/0:19,0:19:51.13:0,51,606	1/1:1,23:24:63.21:907,63,0	1/1:1,13:14:42.11:583,42,0	1/1:0,7:7:18.06:259,18,0	1/1:3,15:18:39.13:562,39,0	1/1:0,16:16:36.12:518,36,0	1/1:3,24:27:69.19:954,69,0	0/0:41,0:41:99:0,120,1483	1/1:3,11:14:30.10:432,30,0
chr10	82968359	.	GTTT	G	5979.24	PASS	AB=0.524;AC=44;AF=0.786;AN=56;BaseQRankSum=-2.253;DP=466;FS=18.362;HRun=13;HaplotypeScore=111.7790;InbreedingCoeff=0.5156;MQ=74.51;MQ0=9;MQRankSum=-9.095;QD=19.54;ReadPosRankSum=4.427;VQSLOD=1.9730;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:2,3:32:13.24:108,0,13	1/1:1,6:7:18.05:219,18,0	0/0:64,0:24:47.76:0,48,569	0/0:54,0:22:29.55:0,30,318	1/1:3,12:16:35.99:415,36,0	1/1:2,6:7:18.05:219,18,0	0/0:1,0:10:10.46:0,10,40	0/1:7,2:33:31.26:31,0,82	1/1:2,3:5:9.02:109,9,0	1/1:6,19:25:57.08:692,57,0	1/1:1,11:12:30.01:348,30,0	1/1:2,4:7:20.97:213,21,0	1/1:2,8:10:21.02:255,21,0	1/1:2,6:8:18.05:219,18,0	1/1:3,12:15:30.07:365,30,0	1/1:1,8:9:24.07:292,24,0	1/1:5,14:18:39.07:471,39,0	1/1:4,7:12:24:273,24,0	0/0:7,1:27:25.03:0,25,58	0/1:0,1:8:22.77:23,0,24	1/1:1,5:6:9.02:109,9,0	1/1:1,3:4:9.02:109,9,0	1/1:1,3:4:6:73,6,0	1/1:0,2:2:6.02:73,6,0	1/1:1,12:13:33.08:401,33,0	1/1:1,15:16:45.11:547,45,0	0/1:2,1:22:11.31:11,0,26	1/1:0,12:12:33.10:401,33,0
chr10	82968383	.	G	GATTT	7091.48	PASS	AC=38;AF=0.704;AN=54;BaseQRankSum=1.895;DP=410;FS=0.000;HRun=0;HaplotypeScore=101.0056;InbreedingCoeff=0.8032;MQ=57.01;MQ0=7;MQRankSum=-7.042;QD=35.82;ReadPosRankSum=0.059;VQSLOD=4.2249;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:42.14:0,42,705	1/1:5,2:7:15.04:299,15,0	0/0:38,0:13:6:0,6,76	0/0:41,0:16:2.37:0,2,79	1/1:9,3:12:15.05:332,15,0	1/1:3,7:9:15.05:371,15,0	0/0:8,0:8:9.03:0,9,151	0/0:38,0:37:63.18:0,63,959	1/1:3,2:6:6.02:149,6,0	1/1:9,9:17:36.11:780,36,0	1/1:6,4:9:12.04:296,12,0	1/1:3,7:10:21.07:520,21,0	1/1:4,2:5:9.01:172,9,0	1/1:5,3:8:15.05:305,15,0	1/1:8,3:11:9.03:223,9,0	1/1:3,5:8:12.04:297,12,0	1/1:10,11:20:33.11:817,33,0	1/1:6,7:13:6.47:433,6,0	0/0:27,0:26:62.55:0,63,979	0/0:9,0:9:21.07:0,21,353	1/1:3,2:4:6.02:149,6,0	1/1:3,1:4:6.01:99,6,0	./.	1/1:1,0:1:2.99:24,3,0	1/1:10,4:13:24.03:438,24,0	1/1:7,13:19:39.13:966,39,0	0/0:21,0:21:48.13:0,48,754	1/1:7,5:12:21.05:424,21,0
chr10	82969402	.	TACAAACAA	T	18037.62	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-3.756;DP=636;FS=0.000;HRun=0;HaplotypeScore=194.8905;InbreedingCoeff=0.9161;MQ=59.89;MQ0=2;MQRankSum=-10.249;QD=40.53;ReadPosRankSum=4.082;VQSLOD=4.0545;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:39:63.19:0,63,804	1/1:4,8:12:27.09:704,27,0	0/1:37,0:21:3.76:4,0,235	0/0:21,0:15:13.89:0,14,257	1/1:9,26:35:66.18:1559,66,0	1/1:8,25:32:60.21:1565,60,0	0/0:22,0:22:33.07:0,33,401	0/0:25,0:23:39.57:0,40,525	1/1:3,13:16:21.07:540,21,0	1/1:7,11:18:33.08:671,33,0	1/1:4,16:20:42.14:993,42,0	1/1:7,12:19:30.10:776,30,0	1/1:5,18:23:45.15:1149,45,0	1/1:8,9:17:27.09:684,27,0	1/1:6,19:25:45.15:1141,45,0	1/1:3,17:20:48.16:1229,48,0	1/1:6,16:22:33.11:839,33,0	1/1:8,8:15:12.04:313,12,0	0/0:28,0:28:59.79:0,60,670	0/0:27,0:28:36.17:0,36,455	1/1:3,13:16:12.18:365,12,0	1/1:5,13:18:36.12:851,36,0	1/1:3,30:32:66.23:1674,66,0	1/1:3,15:18:27.09:697,27,0	1/1:4,15:19:24.08:626,24,0	1/1:3,21:24:57.17:1345,57,0	0/0:26,0:26:48.12:0,48,579	1/1:0,4:4:12.04:313,12,0
chr10	82969421	.	AAAC	A	6792.06	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=4.041;DP=589;FS=14.708;HRun=0;HaplotypeScore=181.6091;InbreedingCoeff=-0.3486;MQ=56.29;MQ0=3;MQRankSum=-7.442;QD=12.74;ReadPosRankSum=12.027;VQSLOD=1.8292;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:3,36:39:39.06:927,39,0	1/1:9,0:9:25.84:135,26,0	0/0:35,0:19:0.34:0,0,138	0/0:21,0:16:4.40:0,4,155	0/1:34,0:34:99:203,0,111	1/1:27,0:27:14.37:255,14,0	1/1:3,18:21:27.43:424,27,0	1/1:6,17:21:50.10:636,50,0	0/1:15,0:15:23.33:75,0,23	0/1:16,0:16:61.56:62,0,155	1/1:16,0:16:10.62:157,11,0	0/1:15,0:15:14.60:111,0,15	0/1:21,0:21:5.10:173,0,5	0/1:15,0:15:60.05:122,0,60	0/1:23,0:23:26.92:162,0,27	0/1:20,0:20:23.52:168,0,24	0/1:19,0:20:6.34:114,0,6	0/1:16,0:16:24.42:24,0,161	1/1:4,22:25:65.96:836,66,0	1/1:2,15:17:44.98:597,45,0	0/1:15,0:15:14.59:44,0,15	0/1:17,0:17:77.79:130,0,78	0/1:36,0:35:99:219,0,103	0/1:18,0:18:17.21:110,0,17	0/1:19,0:19:63.12:85,0,63	0/1:24,0:24:37.97:182,0,38	1/1:4,22:24:47.99:794,48,0	0/1:5,0:5:9.68:46,0,10
chr10	82969422	.	AAC	A	3697.84	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=5.625;DP=585;FS=14.153;HRun=0;HaplotypeScore=184.6130;InbreedingCoeff=-0.4295;MQ=56.44;MQ0=3;MQRankSum=-7.608;QD=6.72;ReadPosRankSum=12.058;VQSLOD=0.8621;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:37,1:38:32.59:539,33,0	1/1:9,0:9:21.34:75,21,0	0/1:31,0:18:19.43:19,0,146	0/0:19,0:15:23.65:0,24,196	0/1:34,0:34:94.02:94,0,173	0/1:27,0:27:6.99:117,0,7	1/1:19,1:20:30.04:293,30,0	1/1:21,1:20:47.48:342,47,0	0/1:16,0:16:36.49:36,0,58	0/1:17,0:17:15.21:15,0,222	0/1:17,0:17:23.79:75,0,24	0/1:15,0:15:30.23:50,0,30	0/1:21,0:21:28.28:85,0,28	0/1:15,0:15:57.29:57,0,85	0/1:23,0:23:56.67:77,0,57	0/1:21,0:21:72.24:72,0,75	0/1:21,0:21:34:52,0,34	0/0:16,0:16:0.52:0,1,209	1/1:24,1:24:63.84:528,64,0	1/1:17,0:17:44.37:359,44,0	0/1:15,0:15:18.34:18,0,29	0/1:17,0:17:69.84:70,0,112	0/1:36,0:35:99:100,0,165	0/1:18,0:18:32.58:56,0,33	0/1:19,0:19:35.84:36,0,90	0/1:24,0:24:70.14:83,0,70	1/1:25,1:24:47.46:427,47,0	0/1:5,0:5:14.27:21,0,14
chr10	82970128	.	C	CA	4243.28	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-10.297;DP=552;FS=8.525;HRun=7;HaplotypeScore=65.0767;InbreedingCoeff=0.9601;MQ=76.64;MQ0=0;MQRankSum=-3.810;QD=30.97;ReadPosRankSum=-1.611;VQSLOD=4.2318;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:48.15:580,48,0	0/0:7,0:7:15.02:0,15,145	0/0:18,0:17:33.02:0,33,308	0/0:20,0:19:7.50:0,7,239	0/0:32,0:32:84.13:0,84,810	0/0:19,0:19:51.04:0,51,484	1/1:3,17:20:45.14:544,45,0	1/1:3,26:29:78.24:942,78,0	0/0:13,0:13:36.05:0,36,348	0/0:13,0:13:33.04:0,33,317	0/0:20,0:20:51.08:0,51,492	0/0:22,0:22:66.08:0,66,630	0/0:20,0:20:57.09:0,57,550	0/0:21,0:21:63.10:0,63,608	0/0:21,0:21:60.10:0,60,579	0/0:23,0:23:60.09:0,60,579	0/0:23,0:23:69.04:0,69,645	0/0:15,0:15:42.05:0,42,398	1/1:2,22:24:40.28:734,40,0	1/1:3,12:15:36.11:429,36,0	0/0:14,0:14:36.06:0,36,347	0/0:27,0:27:72.09:0,72,688	0/0:28,0:28:78.12:0,78,753	0/0:23,0:23:69.11:0,69,666	0/0:20,0:20:51.07:0,51,488	0/0:13,0:13:30.04:0,30,290	1/1:1,30:31:84.22:1015,84,0	0/0:3,0:3:6.01:0,6,58
chr10	82970279	.	G	GC	2728.79	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-10.368;DP=525;FS=1.451;HRun=8;HaplotypeScore=67.3891;InbreedingCoeff=0.9867;MQ=81.57;MQ0=1;MQRankSum=-1.463;QD=21.83;ReadPosRankSum=-2.139;VQSLOD=3.2507;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,15:19:42.12:481,42,0	0/0:10,0:10:24.01:0,24,219	0/0:20,0:19:27.42:0,27,216	0/0:15,0:15:23.80:0,24,176	0/0:16,0:16:45.01:0,45,407	0/0:20,0:20:51.02:0,51,467	1/1:3,22:25:54.16:623,54,0	1/1:11,11:22:30.04:316,30,0	0/0:15,0:15:39.02:0,39,357	0/0:21,0:21:54.02:0,54,490	0/0:15,0:15:39.01:0,39,350	0/0:19,0:19:38.99:0,39,350	0/0:12,0:12:29.98:0,30,265	0/0:21,0:21:63.02:0,63,571	0/0:30,0:30:78.04:0,78,714	0/0:25,0:25:63.02:0,63,573	0/0:18,0:18:47.96:0,48,422	0/0:11,0:11:26.99:0,27,242	1/1:4,11:15:33.10:379,33,0	1/1:3,15:18:48.07:529,48,0	0/0:21,0:21:60.01:0,60,544	0/0:20,0:20:60.01:0,60,540	0/0:25,0:25:66.02:0,66,600	0/0:19,0:19:54.01:0,54,489	0/0:22,0:22:60.02:0,60,548	0/0:21,0:22:56.06:0,56,500	1/1:5,21:26:51.15:588,51,0	0/0:3,0:3:9:0,9,82
chr10	82975468	.	T	TGCGC	4684.23	PASS	AB=0.600;AC=13;AF=0.250;AN=52;BaseQRankSum=-2.428;DP=708;FS=8.538;HRun=0;HaplotypeScore=271.0418;InbreedingCoeff=0.8541;MQ=50.36;MQ0=1;MQRankSum=-0.817;QD=39.04;ReadPosRankSum=-0.264;VQSLOD=3.6825;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:14,0:14:24.03:0,24,306	0/0:41,0:23:60.09:0,60,1051	0/0:32,0:22:57.13:0,57,967	0/0:18,0:18:31.52:0,32,481	0/0:26,0:26:42.14:0,42,645	./.	1/1:4,15:18:48.11:788,48,0	0/0:28,0:28:51.17:0,51,790	0/0:27,0:27:81.26:0,81,1297	0/0:15,0:15:15.22:0,15,249	0/0:44,0:44:93.28:0,93,1415	0/0:26,0:26:46.06:0,46,664	0/0:35,0:35:63.20:0,63,951	0/0:39,0:39:69.19:0,69,1072	0/0:44,0:44:84.22:0,84,1263	0/0:16,0:16:33.08:0,33,485	1/1:14,1:15:34:710,34,0	1/1:2,14:16:44.96:725,45,0	1/1:2,8:10:3.01:64,3,0	0/0:30,0:29:26.98:0,27,289	0/0:24,0:24:30.06:0,30,463	0/0:24,0:24:27.08:0,27,432	0/0:32,0:32:44.66:0,45,730	0/0:29,0:29:36.12:0,36,589	0/1:9,18:27:14.04:1257,0,14	1/1:18,7:25:54.12:922,54,0	1/1:6,2:7:11.71:219,12,0
chr10	82975471	.	GCACA	G	6174.91	PASS	AB=0.856;AC=34;AF=0.607;AN=56;BaseQRankSum=-0.912;DP=742;FS=3.202;HRun=0;HaplotypeScore=269.9292;InbreedingCoeff=0.8589;MQ=45.24;MQ0=1;MQRankSum=0.248;QD=12.63;ReadPosRankSum=4.667;VQSLOD=4.2483;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:28:0.02:0,0,0	1/1:3,11:14:15:188,15,0	0/0:40,0:22:29.80:0,30,406	0/0:31,0:20:41.77:0,42,534	1/1:9,10:19:17.91:187,18,0	1/1:11,13:24:35.93:383,36,0	1/1:16,0:37:0.41:1,0,0	0/0:26,0:21:53.97:0,54,689	1/1:12,14:26:35.82:424,36,0	1/1:16,9:27:53.96:605,54,0	1/1:7,8:15:8.87:87,9,0	1/1:20,19:41:69.03:828,69,0	1/1:13,12:26:32.56:417,33,0	1/1:12,18:34:51.07:636,51,0	1/1:14,19:36:48.10:602,48,0	1/1:22,18:41:57.12:705,57,0	1/1:8,7:15:20.90:264,21,0	0/0:9,0:22:48.13:0,48,740	0/0:18,0:18:42.05:0,42,572	0/0:8,0:9:3.01:0,3,53	0/0:38,0:37:20.02:0,20,240	1/1:10,11:22:14.73:125,15,0	1/1:5,19:24:20.99:253,21,0	0/1:19,12:32:1.33:195,0,1	1/1:8,20:28:24.02:276,24,0	0/0:28,1:33:11.32:0,11,1134	0/0:23,0:27:34.92:0,35,412	0/0:7,0:8:18.06:0,18,302
chr10	82975485	.	ACACACACG	A	10861.67	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-4.972;DP=748;FS=13.504;HRun=0;HaplotypeScore=309.8252;InbreedingCoeff=0.8084;MQ=39.22;MQ0=3;MQRankSum=0.720;QD=24.52;ReadPosRankSum=3.556;VQSLOD=2.4686;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:2.96:0,3,21	1/1:15,0:15:21:440,21,0	0/0:38,0:16:38.61:0,39,832	0/0:32,0:17:45.06:0,45,949	1/1:19,0:19:8.46:257,8,0	1/1:24,0:24:38.95:692,39,0	0/0:39,0:39:12.41:0,12,140	0/0:31,0:25:74.53:0,75,1429	1/1:24,0:24:37.54:801,38,0	1/1:29,0:29:50:1029,50,0	1/1:17,0:17:6.04:101,6,0	1/1:37,0:37:70.97:1557,71,0	1/1:16,8:24:32.81:817,33,0	1/1:34,0:34:53.97:1142,54,0	1/1:35,0:35:44.74:951,45,0	1/1:38,0:38:57.07:1219,57,0	1/1:16,0:16:25.80:464,26,0	0/0:26,0:26:63:0,63,1496	0/0:26,0:26:71.14:0,71,1503	0/0:12,0:12:6.02:0,6,135	0/0:43,0:42:43.50:0,43,764	1/1:21,0:21:5.56:153,6,0	1/1:25,0:25:13.23:398,13,0	1/1:29,0:29:1.62:331,2,0	1/1:24,0:24:21.57:464,22,0	0/1:32,0:32:46.82:47,0,2279	0/0:21,0:21:41.57:0,42,842	0/0:10,0:9:20.94:0,21,586
chr10	82975499	.	ACGCG	A	8372.79	PASS	AB=0.949;AC=33;AF=0.589;AN=56;BaseQRankSum=-0.797;DP=718;FS=22.472;HRun=0;HaplotypeScore=277.4957;InbreedingCoeff=0.8963;MQ=46.42;MQ0=2;MQRankSum=-2.086;QD=21.25;ReadPosRankSum=4.981;VQSLOD=3.3466;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:17.87:0,18,199	1/1:6,11:17:27.08:416,27,0	0/0:35,0:20:6.84:0,7,432	0/0:28,0:18:32.77:0,33,366	1/1:3,17:20:9.01:143,9,0	1/1:7,15:22:42:541,42,0	0/0:43,0:43:29.27:0,29,363	0/0:33,0:27:70.15:0,70,899	1/1:7,14:21:45.12:653,45,0	1/1:1,24:25:66.16:945,66,0	1/1:0,12:12:2.91:47,3,0	1/1:9,21:30:78.19:1164,78,0	1/1:10,13:23:42.08:563,42,0	1/1:6,22:28:54.17:821,54,0	1/1:6,21:27:39.13:606,39,0	1/1:8,19:27:60.19:930,60,0	1/1:7,7:14:30.05:448,30,0	0/0:29,0:29:68.48:0,68,786	0/0:31,0:31:69.93:0,70,913	0/0:14,0:14:17.70:0,18,168	0/0:50,0:49:62.51:0,63,753	1/1:0,17:17:5.97:96,6,0	1/1:0,24:24:15.04:236,15,0	1/1:12,13:25:26.57:362,27,0	1/1:5,20:25:30.06:402,30,0	0/1:35,2:37:0.20:0,0,1014	0/0:23,0:23:36.01:0,36,488	0/0:10,0:9:18.05:0,18,289
chr10	82975501	.	G	GCACGCACGCA	5293.18	PASS	AB=0.957;AC=9;AF=0.161;AN=56;BaseQRankSum=3.888;DP=720;FS=17.190;HRun=0;HaplotypeScore=367.8825;InbreedingCoeff=-0.0499;MQ=47.37;MQ0=2;MQRankSum=-6.572;QD=23.74;ReadPosRankSum=1.099;VQSLOD=2.6068;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,1:22:17.72:0,18,177	0/0:17,0:17:26.83:0,27,427	0/0:37,0:21:30.13:0,30,683	0/0:29,0:18:32.44:0,32,472	0/0:19,0:19:13.44:0,13,258	0/0:25,0:25:47.40:0,47,740	0/1:43,0:43:99:148,0,152	0/1:36,0:30:99:567,0,205	0/0:21,0:21:44.90:0,45,621	0/0:25,0:25:65.15:0,65,1107	0/0:12,0:12:3.25:0,3,72	0/0:31,0:31:77.44:0,77,1270	0/0:23,0:23:41.83:0,42,708	0/0:29,0:29:56.93:0,57,1106	0/0:27,0:27:38.63:0,39,717	0/0:27,0:27:58:0,58,1071	0/0:16,0:16:32.87:0,33,579	0/1:25,3:28:99:1266,0,135	0/1:30,0:30:99:617,0,175	0/1:13,1:14:52.10:52,0,63	0/0:46,0:46:44.24:0,44,807	0/0:17,0:17:6.42:0,6,93	0/0:24,0:24:13.60:0,14,291	0/0:25,0:25:26.35:0,26,343	0/0:25,0:25:29.68:0,30,436	0/1:38,1:39:99:1624,0,176	0/1:20,3:23:99:534,0,114	1/1:8,2:9:1.05:485,1,0
chr10	82978588	.	GA	G	6875.26	PASS	AB=0.773;AC=32;AF=0.571;AN=56;BaseQRankSum=12.950;DP=630;FS=10.748;HRun=9;HaplotypeScore=65.0901;InbreedingCoeff=0.8804;MQ=60.47;MQ0=7;MQRankSum=2.238;QD=19.48;ReadPosRankSum=5.437;VQSLOD=4.5894;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1165	1/1:1,8:9:24.01:219,24,0	0/1:10,0:7:2.62:3,0,151	0/0:8,0:7:18.05:0,18,208	1/1:4,24:28:54.01:493,54,0	1/1:0,16:16:39.02:357,39,0	0/0:15,1:15:8.64:0,9,353	0/0:38,0:36:87.70:0,88,992	1/1:2,15:17:32.58:302,33,0	1/1:3,22:24:66.03:604,66,0	1/1:2,18:19:37.57:474,38,0	1/1:4,11:14:27.01:247,27,0	1/1:2,30:32:75.01:686,75,0	1/1:0,18:18:39.02:357,39,0	1/1:6,16:20:33.01:302,33,0	1/1:2,25:27:54.03:494,54,0	1/1:5,28:33:75.04:686,75,0	0/0:26,0:25:65.74:0,66,691	0/0:26,0:24:66.04:0,66,727	0/0:21,0:21:51.04:0,51,566	0/0:31,0:31:87.25:0,87,995	1/1:3,12:14:36.02:327,36,0	0/1:2,10:12:7.58:193,0,8	1/1:3,24:26:49.40:582,49,0	1/1:3,24:27:60.03:549,60,0	0/0:32,1:33:53.77:0,54,868	0/0:29,0:29:81.21:0,81,914	0/0:14,0:14:39.12:0,39,450
chr10	82979065	.	C	CCA	760.25	PASS	AC=24;AF=0.923;AN=26;BaseQRankSum=1.300;DP=40;FS=4.771;HRun=0;HaplotypeScore=18.9112;InbreedingCoeff=0.1397;MQ=43.62;MQ0=0;MQRankSum=1.445;QD=23.76;ReadPosRankSum=-0.144;VQSLOD=3.0955;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	1/1:0,1:1:3.01:44,3,0	0/0:2,0:1:3.01:0,3,30	1/1:5,1:6:17.96:202,18,0	1/1:2,0:2:3.01:36,3,0	1/1:2,0:2:2.97:20,3,0	./.	./.	1/1:2,0:2:6.01:83,6,0	1/1:2,1:3:6.02:87,6,0	./.	./.	./.	1/1:1,1:2:3.01:38,3,0	1/1:3,1:4:3.01:37,3,0	./.	./.	1/1:2,1:3:6.02:87,6,0	1/1:3,0:3:6.02:82,6,0	./.	./.	./.	1/1:1,0:1:3.01:48,3,0	1/1:2,1:3:8.97:81,9,0	./.	./.	./.
chr10	82980086	.	CTT	C	7220.30	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=7.034;DP=773;FS=9.257;HRun=11;HaplotypeScore=136.8065;InbreedingCoeff=0.9969;MQ=72.01;MQ0=3;MQRankSum=-2.905;QD=25.79;ReadPosRankSum=1.358;VQSLOD=3.4058;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:24:57.13:606,57,0	0/0:7,0:7:18.03:0,18,219	0/0:37,0:26:23.25:0,23,457	0/0:23,0:20:17.63:0,18,286	0/0:33,0:35:95.74:0,96,1391	0/0:25,0:25:69.22:0,69,1036	1/1:0,20:20:57.14:607,57,0	1/1:11,29:41:84.09:874,84,0	0/0:28,1:29:52.34:0,52,1190	0/0:47,0:49:99:0,131,1857	0/0:21,0:23:53.65:0,54,756	0/0:25,0:25:65.95:0,66,958	0/0:22,0:22:54.17:0,54,806	0/0:21,0:22:56.67:0,57,819	0/0:32,0:32:87.29:0,87,1320	0/0:34,1:35:70.40:0,70,1472	0/0:26,0:29:74.50:0,74,951	1/1:1,16:17:45.10:479,45,0	1/1:5,21:26:57.09:592,57,0	1/1:4,37:41:99:1180,111,0	1/1:0,16:16:45.11:479,45,0	0/0:29,0:29:72.21:0,72,1035	0/0:21,0:23:62.69:0,63,903	0/0:20,0:21:59.68:0,60,863	0/0:25,0:25:75.20:0,75,1084	1/1:3,25:29:25.93:743,26,0	1/1:7,36:43:96.19:1022,96,0	1/1:2,20:22:60.12:639,60,0
chr10	82980170	.	A	ATGTC	5999.85	PASS	AB=0.994;AC=30;AF=0.536;AN=56;BaseQRankSum=13.959;DP=813;FS=5.029;HRun=0;HaplotypeScore=230.0164;InbreedingCoeff=-0.3283;MQ=55.27;MQ0=17;MQRankSum=-5.513;QD=8.49;ReadPosRankSum=5.857;VQSLOD=3.2420;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,5:36:29.91:237,30,0	0/1:14,0:14:69.12:124,0,69	0/0:18,0:11:29.87:0,30,265	0/0:20,0:14:39.05:0,39,387	0/0:27,0:26:78.03:0,78,1066	0/1:27,0:25:87.61:88,0,480	1/1:28,0:28:24.52:315,25,0	0/1:58,0:52:99:453,0,208	1/1:29,0:29:2.08:367,2,0	0/1:37,0:36:99:215,0,232	0/1:20,0:20:58.45:67,0,58	0/1:27,0:27:88.10:195,0,88	0/1:29,0:27:71.28:118,0,71	1/1:25,0:23:4.04:206,4,0	0/1:34,0:32:99:292,0,149	0/0:41,0:41:99:0,120,1570	0/1:32,0:31:99:149,0,126	0/1:16,2:18:8.39:351,0,8	0/1:33,0:29:99:210,0,233	0/1:29,0:29:58.55:95,0,59	0/1:27,0:27:77.23:77,0,183	0/1:33,0:30:99:216,0,129	0/1:21,0:20:93.43:123,0,93	0/1:26,0:26:59.92:195,0,60	0/1:30,0:27:97.94:111,0,98	1/1:28,11:39:30.59:1360,31,0	0/1:40,0:40:99:192,0,236	1/1:12,3:15:32.23:244,32,0
chr10	82980178	.	A	ATGTCTGTCTGTC	12618.93	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-4.050;DP=825;FS=3.940;HRun=0;HaplotypeScore=306.4703;InbreedingCoeff=0.6171;MQ=56.20;MQ0=16;MQRankSum=-11.523;QD=33.12;ReadPosRankSum=-4.401;VQSLOD=3.1071;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:39.05:698,39,0	0/0:13,0:13:17.90:0,18,165	0/0:20,0:12:32.58:0,33,781	0/0:20,0:17:51.16:0,51,1274	0/0:26,0:25:16.23:0,16,1523	0/0:27,0:25:31.70:0,32,909	1/1:30,0:30:28.81:1027,29,0	1/1:54,0:48:99:2236,132,0	0/0:29,0:29:41.41:0,41,377	0/1:38,0:37:99:269,0,1116	0/1:18,0:18:27.30:27,0,95	0/0:31,0:31:33.03:0,33,306	0/0:31,0:29:21.01:0,21,194	0/0:25,0:23:24.04:0,24,231	0/0:33,0:31:47.62:0,48,504	0/0:42,0:42:46.87:0,47,2630	0/0:30,0:29:18.52:0,19,222	0/1:19,0:19:53.92:533,0,54	1/1:32,1:29:71.29:1831,71,0	1/1:25,5:30:28.81:684,29,0	0/1:29,0:29:99:413,0,178	0/0:32,0:29:32.20:0,32,286	0/0:23,0:22:21.20:0,21,256	0/0:29,0:29:30.02:0,30,277	0/0:33,0:30:24.02:0,24,223	0/1:41,0:41:5.09:1959,0,5	1/1:37,2:39:66.20:2333,66,0	1/1:13,0:13:33:610,33,0
chr10	82980182	.	A	ATGTC	14526.32	PASS	AB=0.858;AC=47;AF=0.839;AN=56;BaseQRankSum=-2.332;DP=849;FS=2.718;HRun=0;HaplotypeScore=203.3684;InbreedingCoeff=0.3274;MQ=56.56;MQ0=15;MQRankSum=-3.244;QD=18.07;ReadPosRankSum=-0.547;VQSLOD=4.1403;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:38.92:316,39,0	1/1:3,12:15:15.05:392,15,0	0/0:20,0:12:29.05:0,29,302	0/0:25,0:20:56.70:0,57,527	0/1:25,0:24:99:146,0,211	0/1:19,7:25:23.31:583,0,23	1/1:31,0:31:33.50:390,33,0	1/1:58,0:53:99:1041,143,0	1/1:0,29:30:42.14:1098,42,0	1/1:4,0:38:99:1261,100,0	1/1:1,1:19:18.76:193,19,0	1/1:3,27:31:24.08:627,24,0	1/1:3,29:31:15.05:392,15,0	1/1:0,27:25:24.08:627,24,0	1/1:4,32:34:17.95:920,18,0	0/1:42,0:42:99:396,0,210	1/1:5,21:26:21.07:519,21,0	1/1:19,0:19:21.75:594,22,0	1/1:32,0:28:56.50:464,57,0	1/1:28,0:28:27.74:227,28,0	0/1:30,0:30:99:120,0,176	1/1:4,27:28:25.78:705,26,0	0/1:2,24:25:23.34:371,0,23	1/1:1,29:33:24.08:627,24,0	1/1:6,28:31:15.05:392,15,0	1/1:44,0:44:87.69:1506,88,0	1/1:37,0:37:47.71:423,48,0	1/1:13,0:13:26.75:194,27,0
chr10	82982421	.	TC	T	9084.84	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.737;DP=687;FS=1.275;HRun=2;HaplotypeScore=65.7719;InbreedingCoeff=1.0000;MQ=80.98;MQ0=0;MQRankSum=-2.900;QD=36.78;ReadPosRankSum=-0.511;VQSLOD=5.1229;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:42:99:1519,117,0	0/0:13,0:13:36.11:0,36,521	0/0:17,0:17:48.15:0,48,678	0/0:21,0:21:63.21:0,63,931	0/0:34,0:34:99:0,102,1523	0/0:28,0:28:81.26:0,81,1193	1/1:0,16:16:48.16:623,48,0	1/1:3,38:41:99:1412,111,0	0/0:20,0:20:60.20:0,60,894	0/0:37,0:37:99:0,111,1664	0/0:23,0:23:66.22:0,66,989	0/0:27,0:27:78.24:0,78,1130	0/0:18,0:18:54.18:0,54,807	0/0:26,0:26:78.26:0,78,1164	0/0:27,0:27:78.26:0,78,1168	0/0:35,0:35:99:0,105,1508	0/0:22,0:22:66.18:0,66,929	1/1:0,16:16:42.14:545,42,0	1/1:0,16:15:42.14:545,42,0	1/1:0,14:14:39.13:506,39,0	1/1:0,39:39:99:1519,117,0	0/0:22,0:22:66.21:0,66,970	0/0:17,0:17:48.14:0,48,697	0/0:27,0:27:75.20:0,75,1079	0/0:26,0:26:75.25:0,75,1109	1/1:0,22:22:66.21:857,66,0	1/1:0,23:23:66.21:856,66,0	1/1:0,18:18:54.18:701,54,0
chr10	82983832	.	C	CCT	815.14	PASS	AB=0.832;AC=10;AF=0.179;AN=56;BaseQRankSum=-1.152;DP=584;FS=15.336;HRun=0;HaplotypeScore=83.9840;InbreedingCoeff=-0.2162;MQ=70.88;MQ0=4;MQRankSum=-4.276;QD=3.98;ReadPosRankSum=0.951;VQSLOD=1.2982;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,5:33:78.26:0,78,1248	0/1:7,3:9:85.44:85,0,263	0/0:19,0:18:54:0,54,749	0/0:13,0:13:39:0,39,510	0/1:20,4:24:99:116,0,828	0/0:21,0:21:57.19:0,57,925	0/0:22,0:22:66.19:0,66,1046	0/1:26,4:30:99:135,0,974	0/0:18,2:19:54.17:0,54,854	0/1:15,2:16:12.80:13,0,648	0/1:10,2:12:88.14:88,0,373	0/0:17,0:17:51.11:0,51,771	0/0:20,0:20:60.20:0,60,960	0/0:25,0:25:68.51:0,69,1020	0/0:23,1:25:69.24:0,69,1122	0/0:22,2:24:54.18:0,54,878	0/0:32,2:34:42.49:0,42,1475	0/0:34,0:32:87.25:0,87,1367	0/1:13,3:16:99:125,0,465	0/1:14,5:19:99:134,0,582	0/1:22,12:33:49.63:50,0,971	0/0:13,0:13:33.11:0,33,536	0/0:10,0:10:27.08:0,27,407	0/0:22,0:22:66.21:0,66,1052	0/1:19,2:21:61.30:61,0,742	0/1:15,5:20:99:151,0,675	0/0:16,1:17:38.79:0,39,571	0/0:9,1:10:26.82:0,27,303
chr10	82991361	.	GCACACACACA	G	5403.72	PASS	AB=0.643;AC=31;AF=0.554;AN=56;BaseQRankSum=7.125;DP=550;FS=15.744;HRun=0;HaplotypeScore=162.1413;InbreedingCoeff=0.7180;MQ=57.42;MQ0=11;MQRankSum=-6.661;QD=17.49;ReadPosRankSum=0.775;VQSLOD=3.1237;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:35:18.04:0,18,650	1/1:4,0:7:9.03:209,9,0	0/0:22,0:13:0.47:0,0,1	0/0:24,0:14:0.89:0,1,2	1/1:17,7:27:17.08:314,17,0	1/1:11,4:14:3.01:89,3,0	0/0:25,0:26:9.03:0,9,357	0/0:16,0:16:15.52:0,16,492	1/1:9,7:17:14.78:349,15,0	1/1:21,0:29:18.26:363,18,0	1/1:3,0:6:3.01:70,3,0	1/1:14,7:20:6.49:179,6,0	1/1:10,7:18:20.96:530,21,0	1/1:6,11:17:24.08:712,24,0	1/1:14,0:27:27.09:628,27,0	1/1:10,11:21:24.55:712,25,0	1/1:17,11:28:8.50:266,9,0	0/0:14,0:14:25.59:0,26,872	0/0:11,0:13:16.30:0,16,587	0/0:9,0:9:3.01:0,3,129	0/0:33,0:31:39.12:0,39,1472	1/1:12,3:17:12.04:317,12,0	1/1:13,1:15:6.02:159,6,0	1/1:26,9:34:6.01:178,6,0	0/1:4,5:9:26.09:328,0,26	0/0:16,0:18:27.09:0,27,694	0/0:9,0:23:32.90:0,33,1360	0/0:4,0:6:12.04:0,12,390
chr10	82994334	.	TG	T	1375.59	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.238;DP=790;FS=1.299;HRun=2;HaplotypeScore=76.3908;InbreedingCoeff=0.9979;MQ=79.45;MQ0=0;MQRankSum=-3.090;QD=31.99;ReadPosRankSum=1.277;VQSLOD=3.5543;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,126,1874	0/0:8,0:8:24.08:0,24,355	0/0:23,0:23:45.17:0,45,721	0/0:20,0:21:55.03:0,55,644	0/0:29,0:29:75.25:0,75,1122	0/0:25,0:25:72.24:0,72,1076	0/0:33,0:32:99:0,99,1456	0/0:43,0:43:99:0,123,1817	0/0:29,0:29:87.29:0,87,1300	0/0:27,0:27:81.27:0,81,1197	0/0:16,0:16:45.15:0,45,663	0/0:31,0:31:93.31:0,93,1373	0/0:31,0:31:90.26:0,90,1283	0/0:39,0:39:99:0,114,1687	0/0:35,0:35:99:0,105,1536	0/0:30,0:30:90.30:0,90,1347	0/0:26,0:26:78.24:0,78,1125	0/0:14,0:14:42.14:0,42,629	0/0:19,0:19:57.15:0,57,828	0/0:21,0:21:54.17:0,54,788	1/1:1,42:43:99:1470,114,0	0/0:28,0:28:84.28:0,84,1257	0/0:19,0:19:57.19:0,57,853	0/0:32,0:32:93.30:0,93,1369	0/0:24,0:24:69.23:0,69,1033	0/0:39,0:39:99:0,117,1714	0/0:28,0:28:84.15:0,84,1201	0/0:30,0:30:90.25:0,90,1302
chr10	82994602	.	TTC	T	1397.39	PASS	AB=0.822;AC=30;AF=0.600;AN=50;BaseQRankSum=2.861;DP=511;FS=7.185;HRun=0;HaplotypeScore=76.1861;InbreedingCoeff=0.6455;MQ=60.65;MQ0=8;MQRankSum=3.546;QD=5.01;ReadPosRankSum=4.660;VQSLOD=1.2522;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:17.68:117,18,0	1/1:5,2:8:8.81:79,9,0	./.	./.	1/1:13,7:22:18.30:164,18,0	1/1:21,0:21:20.81:178,21,0	1/1:13,0:15:5.85:47,6,0	0/0:33,0:30:9.87:0,10,100	1/1:10,7:17:9.02:98,9,0	1/1:9,4:13:8.09:75,8,0	1/1:8,7:15:18.01:183,18,0	1/1:12,6:18:6.02:65,6,0	1/1:8,6:14:6.02:65,6,0	1/1:5,4:9:9.02:98,9,0	1/1:8,11:19:6.01:65,6,0	0/0:20,0:19:7.94:0,8,292	0/1:30,1:30:8.87:9,0,453	0/0:17,0:17:18.03:0,18,206	0/0:17,0:16:8.94:0,9,99	0/0:20,0:20:3.31:0,3,29	./.	1/1:7,6:13:6.02:66,6,0	1/1:15,1:17:14.81:125,15,0	0/1:14,13:27:26.60:146,0,27	0/0:16,0:16:8.69:0,9,81	0/0:21,0:20:38.98:0,39,437	0/0:22,0:23:14.71:0,15,126	0/0:20,0:20:15.66:0,16,106
chr10	82994652	.	G	GATTT	4070.92	PASS	AB=0.778;AC=15;AF=0.278;AN=54;BaseQRankSum=-4.399;DP=409;FS=3.841;HRun=0;HaplotypeScore=61.9802;InbreedingCoeff=0.4921;MQ=49.64;MQ0=35;MQRankSum=-10.574;QD=25.93;ReadPosRankSum=-4.176;VQSLOD=2.5073;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:17:18.06:408,18,0	0/0:6,0:6:18.06:0,18,302	0/0:12,0:3:9.01:0,9,126	0/0:11,0:2:6.02:0,6,92	0/0:19,0:18:30.10:0,30,516	0/0:12,0:12:24.08:0,24,407	./.	1/1:18,12:23:30.76:1191,31,0	0/0:9,0:9:15.05:0,15,256	0/0:18,0:16:42.14:0,42,713	0/0:19,0:18:38.96:0,39,678	0/0:12,0:11:18.06:0,18,307	0/0:16,0:16:21.07:0,21,365	0/1:15,0:15:2.85:3,0,485	0/0:21,0:19:30.10:0,30,518	0/0:13,0:13:24.07:0,24,386	0/0:29,0:27:63.22:0,63,1089	0/1:8,2:8:40.11:209,0,40	0/1:8,8:13:18.76:654,0,19	1/1:3,13:14:18.02:400,18,0	1/1:2,4:5:3.01:39,3,0	0/0:8,0:8:15.05:0,15,249	0/0:13,0:12:33.10:0,33,530	0/0:18,0:17:21.07:0,21,330	0/0:13,0:13:33.11:0,33,536	0/1:8,9:15:19:727,0,19	1/1:6,9:16:18.46:299,18,0	0/1:8,3:8:43.13:143,0,43
chr10	82995674	.	C	CT	4360	PASS	AB=0.670;AC=17;AF=0.304;AN=56;BaseQRankSum=-9.486;DP=718;FS=7.110;HRun=12;HaplotypeScore=79.4831;InbreedingCoeff=0.5678;MQ=65.40;MQ0=1;MQRankSum=-1.256;QD=14.83;ReadPosRankSum=-1.139;VQSLOD=5.0005;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:13,32:48:38.80:642,0,39	0/0:7,0:8:13.96:0,14,93	0/1:18,0:15:13.98:14,0,70	0/0:10,1:11:1.97:0,2,59	0/0:31,0:32:64.17:0,64,516	0/0:25,0:25:56.54:0,57,410	0/1:5,13:19:5.60:306,0,6	1/1:14,16:30:7.17:373,7,0	0/0:24,0:24:44.63:0,45,328	0/0:39,1:42:55.35:0,55,551	0/0:23,1:26:19.28:0,19,418	0/0:18,0:21:53.78:0,54,366	0/0:21,0:24:56.73:0,57,389	0/0:22,0:24:45.74:0,46,318	0/0:30,1:33:37.45:0,37,417	0/0:23,1:24:15.48:0,15,275	0/0:28,1:33:33.93:0,34,467	1/1:2,26:29:50.80:583,51,0	1/1:11,15:30:36.65:435,37,0	1/1:8,26:36:39.87:658,40,0	0/1:8,15:23:1.75:308,0,2	0/0:23,1:27:30.59:0,31,360	0/0:27,0:30:72.64:0,73,515	0/0:11,1:13:2.69:0,3,174	0/0:19,0:24:42.94:0,43,268	1/1:6,17:23:29.23:445,29,0	1/1:7,20:27:29.17:445,29,0	0/1:2,6:8:19.77:151,0,20
chr10	82997156	.	G	GT	4404.80	PASS	AB=0.762;AC=17;AF=0.304;AN=56;BaseQRankSum=-11.250;DP=662;FS=4.154;HRun=10;HaplotypeScore=65.8919;InbreedingCoeff=0.7346;MQ=72.60;MQ0=1;MQRankSum=-1.349;QD=17.91;ReadPosRankSum=-1.728;VQSLOD=4.9427;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:31:75.19:799,75,0	0/0:5,0:5:14.98:0,15,123	0/1:22,0:21:23.95:24,0,157	0/0:10,0:9:11.46:0,11,84	0/0:31,0:32:70.90:0,71,572	0/0:20,0:20:47.93:0,48,393	1/1:5,17:22:29.34:502,29,0	1/1:4,11:15:11.34:311,11,0	0/0:25,0:25:73.72:0,74,593	0/0:35,0:35:83.88:0,84,689	0/0:30,0:30:71.87:0,72,591	0/0:25,0:25:65.91:0,66,542	0/0:18,0:18:47.93:0,48,394	0/0:18,0:18:47.93:0,48,392	0/0:24,1:24:39.92:0,40,534	0/0:20,0:20:47.91:0,48,391	0/0:36,0:36:95.83:0,96,781	1/1:6,18:24:26.48:487,26,0	0/1:14,19:34:4.70:564,0,5	1/1:6,22:28:45.37:668,45,0	0/0:17,0:18:43.98:0,44,350	0/0:17,0:17:38.93:0,39,320	0/0:31,1:32:48.89:0,49,605	0/0:20,0:20:53.92:0,54,443	0/0:28,0:29:61.94:0,62,498	0/1:11,11:23:24.76:343,0,25	1/1:11,16:29:29.25:479,29,0	1/1:7,8:17:5.10:228,5,0
chr10	83000136	.	ATC	A	19458.29	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=15.667;DP=791;FS=27.882;HRun=0;HaplotypeScore=99.1616;InbreedingCoeff=0.9998;MQ=77.50;MQ0=0;MQRankSum=-2.562;QD=39.63;ReadPosRankSum=7.579;VQSLOD=3.5661;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,1926	1/1:0,12:12:30.10:459,30,0	0/0:23,0:23:58.97:0,59,1069	0/0:11,0:11:33.11:0,33,621	1/1:0,33:33:96.26:1432,96,0	1/1:0,32:32:78.26:1185,78,0	0/0:32,0:32:96.25:0,96,1652	0/0:34,0:34:90.28:0,90,1620	1/1:2,30:32:75.25:1141,75,0	1/1:0,34:34:99:1471,99,0	1/1:0,24:24:69.23:1056,69,0	1/1:1,42:43:99:1698,111,0	1/1:0,24:24:63.21:964,63,0	1/1:2,36:38:90.31:1377,90,0	1/1:0,36:36:96.33:1469,96,0	1/1:1,29:30:72.24:1102,72,0	1/1:1,32:33:81.28:1239,81,0	0/0:23,0:23:69.19:0,69,1294	0/0:24,0:24:72.21:0,72,1305	0/0:19,0:19:57.18:0,57,1056	0/0:24,0:24:72.22:0,72,1303	1/1:0,33:33:87.19:1284,87,0	1/1:0,22:22:63.21:964,63,0	1/1:2,34:36:90.31:1377,90,0	1/1:0,29:29:81.28:1240,81,0	0/0:28,0:28:81.27:0,81,1528	0/0:32,0:32:93.32:0,93,1784	0/0:12,0:12:27.09:0,27,499
chr10	83001731	.	AT	A	5730.09	PASS	AB=0.943;AC=33;AF=0.589;AN=56;BaseQRankSum=11.468;DP=562;FS=2.494;HRun=10;HaplotypeScore=62.5854;InbreedingCoeff=0.9261;MQ=74.69;MQ0=1;MQRankSum=0.831;QD=19.04;ReadPosRankSum=4.201;VQSLOD=5.6469;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,2:23:14.09:0,14,611	1/1:0,13:13:38.99:339,39,0	0/1:31,2:25:8.47:8,0,182	0/0:18,0:10:10.73:0,11,78	1/1:1,25:26:71.98:625,72,0	1/1:4,14:18:41.99:365,42,0	0/0:17,0:17:42.11:0,42,464	0/0:42,0:42:99:0,102,1128	1/1:3,17:20:44.99:391,45,0	1/1:3,26:29:77.98:677,78,0	1/1:2,15:17:44.99:391,45,0	1/1:1,8:9:23.99:208,24,0	1/1:1,16:17:41.89:364,42,0	1/1:2,14:16:38.99:339,39,0	1/1:3,13:17:35.03:293,35,0	1/1:2,14:17:38.03:319,38,0	1/1:3,18:21:47.98:417,48,0	0/0:17,0:17:42.09:0,42,454	0/0:25,0:26:65.99:0,66,693	0/0:26,2:27:37.10:0,37,629	0/0:18,0:18:45.11:0,45,489	1/1:1,9:10:26.99:234,27,0	1/1:3,9:13:29.03:240,29,0	1/1:1,11:12:26.98:234,27,0	1/1:0,13:13:32.99:286,33,0	0/0:30,1:31:52.15:0,52,804	0/0:26,0:25:65.67:0,66,705	0/0:14,0:14:38.81:0,39,392
chr10	83005228	.	TA	T	7977.90	PASS	AB=0.690;AC=26;AF=0.464;AN=56;BaseQRankSum=5.262;DP=1155;FS=25.517;HRun=2;HaplotypeScore=219.0424;InbreedingCoeff=-0.8667;MQ=69.49;MQ0=1;MQRankSum=-6.361;QD=7.50;ReadPosRankSum=-0.712;VQSLOD=-0.0985;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,16:44:99:195,0,649	0/1:8,10:18:99:229,0,246	0/0:43,0:39:99:0,108,1507	0/0:46,2:44:84.05:0,84,1288	0/1:15,19:34:53.34:53,0,247	0/1:21,7:29:99:154,0,792	0/1:26,15:41:99:174,0,849	0/1:31,29:50:99:815,0,674	0/1:34,19:53:99:221,0,1235	0/1:21,26:47:99:856,0,742	0/1:17,14:31:39.99:40,0,375	0/1:27,19:46:99:238,0,923	0/1:27,29:56:99:266,0,918	0/1:27,28:55:99:285,0,829	0/1:32,44:76:99:517,0,1129	0/1:39,27:66:99:629,0,1471	0/1:14,11:25:99:171,0,523	0/1:10,6:16:99:151,0,348	0/1:15,17:32:99:531,0,502	0/1:16,16:32:99:113,0,264	0/1:19,14:32:99:256,0,172	0/1:34,26:60:99:201,0,881	0/1:10,15:25:99:122,0,225	0/1:21,11:32:99:137,0,354	0/1:18,12:30:99:133,0,459	0/1:24,25:49:99:769,0,915	0/1:28,27:55:99:504,0,817	0/1:12,7:19:99:218,0,440
chr10	83008608	.	GACACACAC	G	3511.52	PASS	AB=0.855;AC=40;AF=0.741;AN=54;BaseQRankSum=-0.340;DP=501;FS=0.803;HRun=0;HaplotypeScore=163.6033;InbreedingCoeff=0.0866;MQ=48.89;MQ0=9;MQRankSum=-0.076;QD=8.65;ReadPosRankSum=4.714;VQSLOD=2.1762;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:22:5.92:113,6,0	1/1:3,0:3:3.01:62,3,0	./.	0/0:29,0:20:6.02:0,6,79	1/1:8,5:15:0.89:2,1,0	1/1:6,7:14:5.17:27,5,0	1/1:22,1:24:8.67:122,9,0	0/1:25,0:26:83.05:83,0,87	1/1:18,1:21:1.73:329,2,0	1/1:15,2:17:3.37:246,3,0	0/1:12,3:14:0:0,0,0	0/1:19,4:24:5.07:141,0,5	1/1:13,9:22:15.47:435,15,0	0/1:10,1:12:16.93:163,0,17	0/1:18,7:25:13.62:70,0,14	1/1:16,3:20:15.05:340,15,0	1/1:10,2:9:4.23:200,4,0	1/1:9,1:8:3.01:75,3,0	0/1:12,0:11:25.54:55,0,26	0/1:11,0:12:17.07:17,0,19	0/0:19,0:19:21.04:0,21,736	1/1:10,5:16:2.88:76,3,0	1/1:10,0:10:3.01:67,3,0	0/0:18,2:19:2.77:0,3,60	0/1:13,2:14:0:0,0,0	1/1:23,3:28:6.31:607,6,0	1/1:10,1:17:23.48:248,23,0	1/1:3,0:2:0.17:33,0,0
chr10	83008636	.	C	CG	666.90	PASS	AB=0.834;AC=27;AF=0.500;AN=54;BaseQRankSum=2.509;DP=352;FS=16.468;HRun=0;HaplotypeScore=116.1914;InbreedingCoeff=0.1436;MQ=31.22;MQ0=16;MQRankSum=2.685;QD=3.10;ReadPosRankSum=-1.284;VQSLOD=1.9095;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,6:18:8.16:72,8,0	1/1:4,0:4:2.92:17,3,0	./.	0/0:7,0:3:6.02:0,6,73	0/1:11,1:12:0:0,0,0	1/1:11,0:11:1.24:17,1,0	1/1:16,2:16:1.11:40,1,0	0/0:27,0:25:72.26:0,72,710	0/1:11,4:17:44.82:129,0,45	0/1:14,0:13:45.99:46,0,197	0/1:9,1:10:0:0,0,0	0/1:11,4:15:10.12:80,0,10	0/0:15,1:15:3.09:0,3,59	1/1:7,1:9:4.65:53,5,0	1/1:12,4:16:4.25:42,4,0	0/1:10,4:14:24.97:103,0,25	0/1:11,1:12:67.27:67,0,94	0/1:5,2:5:0.57:1,0,49	0/1:5,1:5:25.85:26,0,106	0/0:7,1:7:4.51:0,5,25	0/0:18,0:15:21.92:0,22,274	1/1:11,1:13:2.28:44,2,0	1/1:8,0:7:3.01:43,3,0	0/0:9,4:11:3.01:0,3,42	0/0:8,1:8:0:0,0,0	0/0:16,2:18:16.61:0,17,422	0/0:14,0:13:20.48:0,20,152	1/1:3,0:2:2.22:36,2,0
chr10	83008638	.	C	CG	219.90	PASS	AB=0.967;AC=24;AF=0.462;AN=52;BaseQRankSum=3.954;DP=332;FS=25.116;HRun=0;HaplotypeScore=115.3889;InbreedingCoeff=0.0493;MQ=30.14;MQ0=15;MQRankSum=0.900;QD=1.09;ReadPosRankSum=-1.824;VQSLOD=0.6431;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:17:1.94:24,2,0	1/1:4,0:4:0.89:2,1,0	./.	./.	0/1:12,0:12:0:0,0,0	0/0:11,0:10:2.60:0,3,11	0/0:14,1:13:3.62:0,4,16	0/1:22,0:20:50.72:51,0,480	0/1:14,1:15:37.19:37,0,54	0/0:13,0:12:10.80:0,11,228	0/1:11,0:10:0:0,0,0	1/1:15,0:14:1.95:44,2,0	0/0:16,0:15:17.78:0,18,105	0/1:9,0:9:5.96:12,0,6	1/1:17,0:16:4.18:22,4,0	0/1:13,0:13:25.11:25,0,50	0/1:14,0:12:33.52:34,0,115	0/0:7,0:5:8.10:0,8,61	0/1:5,0:5:13.07:13,0,125	0/1:6,1:7:15.04:35,0,15	0/0:18,0:15:18.95:0,19,253	1/1:13,0:13:2.26:23,2,0	1/1:8,0:7:2.99:23,3,0	0/0:15,0:11:2.97:0,3,20	0/0:9,0:8:0:0,0,0	0/0:17,0:17:37.67:0,38,479	0/1:13,1:13:7.68:8,0,92	1/1:3,0:2:1.03:3,1,0
chr10	83008639	.	ACACAC	A	1259.79	PASS	AB=0.992;AC=28;AF=0.538;AN=52;BaseQRankSum=5.220;DP=325;FS=14.231;HRun=0;HaplotypeScore=116.4450;InbreedingCoeff=-0.3842;MQ=29.91;MQ0=15;MQRankSum=-2.040;QD=4.23;ReadPosRankSum=2.536;VQSLOD=1.6129;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,1:17:1.48:29,0,1	1/1:4,0:4:3.01:46,3,0	./.	./.	0/1:12,0:12:0.02:0,0,0	1/1:11,0:10:2.35:34,2,0	0/1:15,0:13:2.81:66,0,3	0/1:21,0:19:50.33:50,0,350	0/1:15,0:15:34.30:124,0,34	0/1:13,0:12:99:104,0,132	0/1:11,0:10:0:0,0,0	0/1:15,0:14:6.35:51,0,6	0/1:16,0:15:18.08:136,0,18	0/1:9,0:9:15.78:47,0,16	0/1:17,0:16:16.05:28,0,16	0/1:13,0:13:9.74:147,0,10	0/1:13,0:11:83.28:83,0,92	0/1:7,0:5:31.11:31,0,33	0/1:5,0:5:30.22:30,0,123	0/1:8,0:7:12.87:13,0,19	0/0:17,0:14:16.89:0,17,498	1/1:13,0:13:4.12:31,4,0	1/1:7,1:7:2.84:14,3,0	0/1:13,0:9:0:0,0,0	0/1:9,0:8:0:0,0,0	0/1:15,2:17:99:181,0,194	0/1:14,0:13:41.53:143,0,42	0/0:2,0:1:1.82:0,2,5
chr10	83008641	.	ACAC	A	712.47	PASS	AB=0.970;AC=26;AF=0.500;AN=52;BaseQRankSum=5.965;DP=317;FS=10.425;HRun=0;HaplotypeScore=107.8875;InbreedingCoeff=-0.1859;MQ=32.54;MQ0=15;MQRankSum=-1.720;QD=2.82;ReadPosRankSum=2.212;VQSLOD=1.3364;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,1:17:1.90:30,2,0	1/1:5,0:5:2.64:34,3,0	0/0:4,0:1:0.89:0,1,2	./.	0/1:11,1:12:0.02:0,0,0	1/1:11,0:10:2.65:34,3,0	1/1:14,0:12:6.45:61,6,0	0/0:19,0:17:13.42:0,13,394	0/1:15,0:15:39.56:95,0,40	0/1:12,1:12:67.36:67,0,135	0/1:11,0:10:0:0,0,0	0/0:13,0:12:3.07:0,3,10	0/1:15,1:15:19.30:65,0,19	0/1:8,0:8:8.88:32,0,9	0/1:17,0:16:5.59:24,0,6	0/1:12,1:13:10.54:111,0,11	0/1:13,0:11:75.35:75,0,115	0/1:6,1:5:17.71:18,0,33	0/1:5,0:5:33.54:34,0,128	0/1:9,0:8:7.79:8,0,18	0/0:16,0:13:16.45:0,16,360	1/1:11,1:12:1.24:3,1,0	./.	0/1:12,1:9:0:0,0,0	0/1:9,0:8:0:0,0,0	0/1:17,0:17:72.01:72,0,297	0/1:14,0:13:66.52:79,0,67	0/0:2,0:1:1.55:0,2,4
chr10	83008674	.	A	AGGG	3404.16	PASS	AB=1.000;AC=48;AF=0.889;AN=54;BaseQRankSum=1.965;DP=455;FS=15.353;HRun=9;HaplotypeScore=130.6800;InbreedingCoeff=0.5785;MQ=56.39;MQ0=14;MQRankSum=-3.985;QD=8.87;ReadPosRankSum=-0.930;VQSLOD=-0.1394;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:22:26.83:192,27,0	0/1:4,0:4:0:0,0,0	0/0:23,0:14:24.72:0,25,272	0/0:33,0:20:39.54:0,40,448	1/1:11,0:10:5.98:62,6,0	1/1:9,0:8:8.98:99,9,0	1/1:31,0:29:30.06:365,30,0	1/1:31,0:28:29.50:300,29,0	1/1:18,0:18:15.71:199,16,0	1/1:17,0:17:29.96:400,30,0	1/1:16,1:15:2.58:42,3,0	1/1:14,0:13:3.44:20,3,0	1/1:13,0:12:6.02:88,6,0	1/1:11,0:10:11.25:122,11,0	1/1:9,12:20:8.80:55,9,0	1/1:25,0:25:16.09:189,16,0	1/1:18,1:15:20.72:201,21,0	1/1:7,0:6:8.92:107,9,0	1/1:7,0:7:8.88:116,9,0	1/1:17,0:16:11.99:142,12,0	0/1:8,0:7:0:0,0,0	1/1:20,0:20:15.38:168,15,0	./.	1/1:13,0:11:0.94:1,1,0	1/1:14,0:12:12.04:154,12,0	1/1:14,0:14:11.97:181,12,0	1/1:9,0:9:6.02:82,6,0	1/1:8,0:7:9.03:118,9,0
chr10	83008676	.	G	GGGA	4848.40	PASS	AB=0.605;AC=46;AF=0.885;AN=52;BaseQRankSum=-1.421;DP=377;FS=5.155;HRun=0;HaplotypeScore=93.6586;InbreedingCoeff=0.5038;MQ=63.70;MQ0=14;MQRankSum=-2.954;QD=15.64;ReadPosRankSum=-0.710;VQSLOD=3.8560;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,1:15:15.11:300,15,0	./.	0/0:23,0:14:29.63:0,30,434	0/0:34,0:21:42.23:0,42,643	1/1:3,6:9:5.99:81,6,0	1/1:1,9:10:6.02:103,6,0	1/1:6,20:29:27.57:479,28,0	1/1:18,0:26:4.17:463,4,0	1/1:4,0:11:4.68:169,5,0	1/1:3,11:14:33.08:600,33,0	1/1:2,7:8:2.58:59,3,0	1/1:5,0:9:2.03:5,2,0	1/1:2,0:8:9.03:155,9,0	1/1:9,0:8:14.26:235,14,0	1/1:17,1:18:9.94:63,10,0	1/1:0,16:16:11.89:236,12,0	1/1:5,1:13:20.71:259,21,0	1/1:3,0:8:8.05:129,8,0	1/1:0,6:6:17.60:212,18,0	1/1:3,6:10:12.04:213,12,0	1/1:5,0:8:1.80:5,2,0	1/1:6,9:17:14.08:223,14,0	./.	0/1:3,0:11:0:0,0,0	1/1:3,1:8:12.04:244,12,0	0/1:5,1:12:0.86:251,0,1	1/1:2,6:8:9.02:177,9,0	1/1:7,0:6:9.03:187,9,0
chr10	83008839	.	CAAACAAAA	C	13441.03	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.966;DP=434;FS=12.261;HRun=0;HaplotypeScore=96.1748;InbreedingCoeff=0.7807;MQ=56.22;MQ0=7;MQRankSum=-2.856;QD=36.93;ReadPosRankSum=2.527;VQSLOD=3.7206;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,29:32:27.09:746,27,0	1/1:1,4:5:12.04:324,12,0	0/0:21,0:9:15.03:0,15,403	0/0:29,0:13:15.67:0,16,284	1/1:2,13:15:29.90:610,30,0	1/1:0,11:11:9.03:230,9,0	1/1:1,17:18:27.09:735,27,0	1/1:10,27:33:3.08:750,3,0	1/1:0,5:5:11.88:337,12,0	1/1:4,13:16:36.06:847,36,0	1/1:0,14:15:38.85:855,39,0	1/1:0,10:10:11.64:315,12,0	1/1:0,15:15:30.10:810,30,0	1/1:0,10:10:18.06:494,18,0	1/1:0,11:11:15.05:421,15,0	1/1:0,16:16:23.75:652,24,0	1/1:3,21:24:30.10:808,30,0	1/1:1,17:17:24.08:649,24,0	1/1:1,11:12:33.06:682,33,0	1/1:1,11:12:29.75:496,30,0	0/0:19,0:19:57.18:0,57,2092	1/1:2,9:11:14.96:274,15,0	1/1:1,11:12:15.06:472,15,0	1/1:1,14:15:17.98:422,18,0	1/1:1,12:12:18.06:493,18,0	1/1:2,17:19:44.95:785,45,0	1/1:0,7:7:5.54:150,6,0	1/1:0,4:4:3.01:84,3,0
chr10	83016013	.	AAAATAAATAAAT	A	2370.17	PASS	AB=0.929;AC=23;AF=0.548;AN=42;BaseQRankSum=1.500;DP=279;FS=24.252;HRun=0;HaplotypeScore=97.0336;InbreedingCoeff=0.5924;MQ=68.10;MQ0=1;MQRankSum=-4.557;QD=19.43;ReadPosRankSum=-0.190;VQSLOD=0.2326;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,1:13:0.97:15,0,1	1/1:2,2:4:6.02:205,6,0	0/0:17,0:16:0.47:0,0,1	./.	0/0:10,0:16:8.07:0,8,116	1/1:12,7:19:18.06:614,18,0	./.	0/0:27,0:26:6.02:0,6,92	./.	1/1:7,1:9:4.57:106,5,0	1/1:4,2:6:5.98:122,6,0	./.	1/1:7,4:11:9.03:307,9,0	1/1:3,1:4:3.01:102,3,0	1/1:9,3:12:9.03:307,9,0	1/1:7,0:7:3:25,3,0	1/1:14,3:17:6.49:206,6,0	0/0:4,0:9:15.05:0,15,383	0/0:6,0:7:3.01:0,3,77	./.	0/0:1,0:2:3.01:0,3,77	./.	1/1:7,1:8:3.01:102,3,0	./.	1/1:6,6:12:12.04:409,12,0	0/0:11,0:11:12.04:0,12,532	0/0:11,0:14:9.03:0,9,228	0/0:16,0:16:30.10:0,30,1524
chr10	83016468	.	TTGTGTGTG	T	7703.17	PASS	AB=0.793;AC=39;AF=0.696;AN=56;BaseQRankSum=1.090;DP=553;FS=2.028;HRun=0;HaplotypeScore=158.8679;InbreedingCoeff=0.3154;MQ=59.70;MQ0=12;MQRankSum=-6.680;QD=18.08;ReadPosRankSum=-0.036;VQSLOD=4.1225;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:41:46.63:0,47,553	1/1:7,4:10:3.01:76,3,0	0/0:18,0:12:3.01:0,3,44	0/0:27,0:19:2.60:0,3,10	1/1:8,6:16:21.03:453,21,0	0/1:10,7:17:5.95:216,0,6	0/0:16,0:21:15:0,15,220	0/1:14,1:15:11.85:75,0,12	1/1:8,12:22:39.13:942,39,0	1/1:15,7:21:20.89:479,21,0	1/1:8,12:20:15.01:322,15,0	1/1:12,7:19:16.10:319,16,0	1/1:8,8:15:18.06:453,18,0	1/1:12,5:16:12.04:269,12,0	1/1:7,14:23:18.19:898,18,0	1/1:10,10:20:20.97:438,21,0	1/1:25,9:35:33.03:755,33,0	0/1:11,0:17:5.39:47,0,5	0/1:16,0:20:51.03:56,0,51	0/1:8,1:19:52.64:78,0,53	0/0:20,0:19:24:0,24,601	1/1:9,5:14:17.93:267,18,0	1/1:7,7:14:26.85:482,27,0	1/1:9,7:16:6.02:151,6,0	1/1:8,5:14:15.01:302,15,0	1/1:10,0:23:28.34:506,28,0	0/1:15,0:23:52.27:52,0,53	0/1:9,0:9:16.95:67,0,17
chr10	83017949	.	TA	T	152.66	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.622;DP=374;FS=23.336;HRun=11;HaplotypeScore=120.7843;InbreedingCoeff=0.4482;MQ=61.32;MQ0=7;MQRankSum=4.374;QD=12.72;ReadPosRankSum=0.704;VQSLOD=1.7516;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:12.96:0,13,67	0/0:9,0:8:11.85:0,12,96	0/0:27,0:17:8.75:0,9,198	0/0:31,0:17:5.79:0,6,196	0/0:28,0:28:46.10:0,46,265	0/0:7,0:7:8.69:0,9,60	0/0:7,0:6:5.75:0,6,44	0/0:11,0:10:17.52:0,18,123	0/0:9,0:9:14.31:0,14,78	0/0:11,0:10:23.86:0,24,223	0/0:14,0:14:17.16:0,17,96	0/0:8,0:8:12.76:0,13,68	0/0:7,0:7:11.61:0,12,76	0/0:14,0:14:17.53:0,18,128	0/0:17,0:16:17.47:0,17,120	0/0:11,0:10:11.57:0,12,79	0/0:8,0:8:3.01:0,3,31	0/0:10,0:10:23.05:0,23,146	0/0:12,0:9:20.66:0,21,160	0/0:15,0:15:34.78:0,35,210	1/1:0,12:12:29.97:246,30,0	0/0:7,0:7:2.90:0,3,16	0/0:9,0:9:17.38:0,17,119	0/0:11,0:11:14.13:0,14,72	0/0:12,0:11:8.68:0,9,68	0/0:29,0:29:50.58:0,51,494	0/0:14,0:14:26.51:0,27,211	0/0:5,0:5:5.68:0,6,28
chr10	83019500	.	GCACA	G	3216.93	PASS	AB=0.830;AC=45;AF=0.900;AN=50;BaseQRankSum=1.400;DP=572;FS=8.639;HRun=0;HaplotypeScore=101.0939;InbreedingCoeff=0.1110;MQ=55.51;MQ0=14;MQRankSum=0.946;QD=6.54;ReadPosRankSum=2.656;VQSLOD=1.3785;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:37:5.79:56,6,0	0/1:5,2:8:11.94:109,0,12	./.	./.	1/1:19,2:22:15.02:178,15,0	1/1:21,1:23:13.93:147,14,0	0/1:16,0:16:0:0,0,0	./.	1/1:12,7:18:9.03:135,9,0	1/1:11,5:15:7.29:112,7,0	1/1:12,1:15:9.01:102,9,0	1/1:16,11:27:15.05:232,15,0	1/1:10,3:13:14.53:192,15,0	1/1:13,6:21:6.02:93,6,0	0/1:11,5:15:11.93:40,0,12	1/1:12,9:24:27.03:318,27,0	1/1:15,11:29:11.59:275,12,0	1/1:13,10:23:20.70:366,21,0	1/1:12,0:15:6.87:58,7,0	0/0:13,0:16:0:0,0,0	1/1:28,0:27:2.97:20,3,0	1/1:10,9:19:12.02:163,12,0	1/1:10,4:15:6.02:93,6,0	1/1:21,8:29:12.04:176,12,0	1/1:10,6:17:9.50:140,10,0	1/1:19,0:28:10.03:66,10,0	1/1:6,0:13:18.03:186,18,0	1/1:7,0:13:6:56,6,0
chr10	83021714	.	TAC	T	1335.43	PASS	AB=0.880;AC=32;AF=0.640;AN=50;BaseQRankSum=3.215;DP=635;FS=1.966;HRun=0;HaplotypeScore=91.0413;InbreedingCoeff=0.1917;MQ=66.19;MQ0=17;MQRankSum=1.537;QD=3.42;ReadPosRankSum=2.872;VQSLOD=1.9649;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:19:5.68:28,6,0	1/1:6,1:7:3.01:32,3,0	0/0:42,0:31:0:0,0,0	./.	1/1:11,0:11:6.73:48,7,0	0/1:21,0:21:4.25:55,0,4	./.	0/0:33,0:32:1.25:0,1,3	0/1:24,1:27:10.15:58,0,10	1/1:21,3:24:5.18:63,5,0	1/1:13,3:16:3:32,3,0	0/1:15,1:18:33.32:112,0,33	0/1:19,3:22:30.06:30,0,37	1/1:20,0:20:8.85:73,9,0	1/1:15,6:24:15.31:108,15,0	1/1:21,12:34:23.73:221,24,0	1/1:16,6:22:14.87:143,15,0	./.	0/0:19,0:19:14.06:0,14,136	0/0:15,0:19:9.96:0,10,79	0/0:39,0:38:1.73:0,2,5	1/1:17,1:19:11.07:85,11,0	1/1:8,2:9:3.01:32,3,0	1/1:29,6:35:3.06:179,3,0	0/1:16,2:19:26.38:102,0,26	0/1:24,0:29:32.95:35,0,33	0/0:19,0:19:20.23:0,20,209	1/1:5,3:8:5.85:46,6,0
chr10	83023670	.	TCAAG	T	1180.40	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.276;DP=660;FS=0.000;HRun=0;HaplotypeScore=106.5532;InbreedingCoeff=0.9974;MQ=89.87;MQ0=0;MQRankSum=-2.674;QD=35.77;ReadPosRankSum=0.930;VQSLOD=3.3485;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,135,3688	0/0:20,0:20:57.20:0,57,1510	0/0:22,0:22:57.18:0,57,1416	0/0:31,0:31:83.94:0,84,1879	0/0:21,0:21:57.20:0,57,1527	0/0:17,0:17:51.18:0,51,1369	0/0:20,0:20:57.18:0,57,1443	0/0:24,0:24:66.20:0,66,1566	0/0:26,0:26:78.27:0,78,2088	0/0:24,0:24:72.24:0,72,1873	0/0:15,0:15:39.13:0,39,1067	0/0:24,0:24:66.23:0,66,1765	0/0:22,0:22:57.18:0,57,1492	0/0:35,0:35:99:0,105,2722	0/0:34,0:33:96.32:0,96,2572	0/0:24,0:24:72.24:0,72,1895	0/0:24,0:24:66.23:0,66,1783	0/0:21,0:21:60.21:0,60,1644	0/0:20,0:20:60.21:0,60,1627	0/0:22,0:22:59.72:0,60,1577	1/1:2,31:33:66.55:1275,67,0	0/0:24,0:24:69.22:0,69,1825	0/0:11,0:11:30.10:0,30,821	0/0:30,0:30:84.26:0,84,2235	0/0:17,0:17:51.14:0,51,1269	0/0:25,0:25:75.25:0,75,1960	0/0:18,0:18:54.19:0,54,1433	0/0:8,0:8:24.08:0,24,657
chr10	83024859	.	ATT	A	1774.42	PASS	AB=1.000;AC=31;AF=0.574;AN=54;BaseQRankSum=-6.447;DP=222;FS=0.655;HRun=9;HaplotypeScore=37.3052;InbreedingCoeff=0.6851;MQ=74.12;MQ0=5;MQRankSum=0.998;QD=16.43;ReadPosRankSum=3.062;VQSLOD=0.4095;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:13:24.04:0,24,238	1/1:1,0:1:3:25,3,0	0/0:5,0:4:2.88:0,3,15	0/1:7,0:6:12.71:18,0,13	1/1:2,4:6:6:67,6,0	1/1:2,14:16:36.09:406,36,0	0/0:3,0:3:9.02:0,9,95	0/0:12,0:28:63.13:0,63,563	1/1:2,4:6:3:35,3,0	1/1:0,6:6:18.05:209,18,0	1/1:1,3:4:6.01:70,6,0	1/1:0,7:7:9.03:104,9,0	1/1:2,0:2:5.99:48,6,0	1/1:2,0:2:5.96:44,6,0	1/1:0,7:7:12.04:140,12,0	1/1:1,9:10:7.68:75,8,0	1/1:2,16:18:33.06:360,33,0	0/0:4,0:21:37.74:0,38,317	0/0:5,0:5:12.02:0,12,126	0/0:3,0:3:6:0,6,54	0/0:3,0:3:9.02:0,9,110	1/1:1,0:1:2.98:22,3,0	./.	1/1:6,1:7:17.34:137,17,0	1/1:0,8:8:18.05:209,18,0	0/0:1,0:5:12.01:0,12,113	0/0:6,0:6:6:0,6,54	0/0:3,0:12:18.03:0,18,189
chr10	83025163	.	AAG	A	10249.76	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.051;DP=449;FS=2.694;HRun=0;HaplotypeScore=118.8191;InbreedingCoeff=0.8619;MQ=68.00;MQ0=0;MQRankSum=-3.313;QD=24.23;ReadPosRankSum=3.403;VQSLOD=5.9414;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:42.05:419,42,0	1/1:11,0:11:18.04:186,18,0	0/0:18,0:12:17.86:0,18,188	0/0:8,0:5:5.83:0,6,61	1/1:20,0:20:45.04:448,45,0	1/1:20,0:20:39.55:430,40,0	1/1:11,0:11:15:141,15,0	1/1:28,0:28:80:740,80,0	1/1:11,0:11:29.81:268,30,0	1/1:23,0:23:69.07:735,69,0	1/1:12,0:12:36.04:376,36,0	1/1:12,0:12:27.02:275,27,0	1/1:21,1:22:51.08:556,51,0	1/1:12,0:12:30.04:290,30,0	1/1:16,0:16:39.07:382,39,0	1/1:23,1:24:57.08:576,57,0	1/1:15,1:16:45.03:439,45,0	1/1:17,2:19:47.92:467,48,0	1/1:16,1:17:48.02:478,48,0	1/1:12,0:12:30.01:306,30,0	1/1:2,3:5:8.70:95,9,0	1/1:6,0:6:14.88:121,15,0	1/1:14,0:14:26.99:256,27,0	1/1:6,0:6:10.21:146,10,0	1/1:19,0:19:45.10:465,45,0	1/1:26,0:26:70.70:724,71,0	1/1:31,2:33:74.99:728,75,0	1/1:10,0:10:21.04:205,21,0
chr10	83025164	.	AG	A	12973.87	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=0.197;DP=446;FS=0.000;HRun=1;HaplotypeScore=100.8981;InbreedingCoeff=0.6570;MQ=68.10;MQ0=0;MQRankSum=-2.156;QD=29.62;ReadPosRankSum=4.176;VQSLOD=4.5745;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:42.12:553,42,0	1/1:0,11:11:18.06:248,18,0	0/1:18,0:12:2.51:3,0,142	0/0:8,0:5:5.48:0,5,49	1/1:0,20:20:45.03:564,45,0	1/1:1,18:19:47.89:633,48,0	1/1:0,11:11:15.05:206,15,0	1/1:0,27:27:81.12:975,81,0	1/1:0,11:11:29.95:353,30,0	1/1:0,23:23:69.07:812,69,0	1/1:0,12:12:36.02:437,36,0	1/1:0,12:12:27.07:339,27,0	1/1:1,21:22:51.01:600,51,0	1/1:0,12:12:30.10:413,30,0	1/1:0,16:16:39.13:538,39,0	1/1:1,22:23:57.17:761,57,0	1/1:1,15:16:45.11:593,45,0	1/1:2,17:19:42.32:558,42,0	1/1:1,16:17:48.08:571,48,0	1/1:0,12:12:30.01:357,30,0	1/1:3,2:5:8.94:82,9,0	1/1:0,6:6:14.84:100,15,0	1/1:0,14:14:27.04:349,27,0	1/1:3,3:6:17.79:169,18,0	1/1:1,18:19:45.11:599,45,0	1/1:4,23:27:75.13:964,75,0	1/1:3,29:32:74.95:910,75,0	1/1:0,10:10:21.07:290,21,0
chr10	83025612	.	CTTTG	C	4100.97	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.688;DP=843;FS=5.745;HRun=0;HaplotypeScore=134.0810;InbreedingCoeff=0.9992;MQ=80.25;MQ0=0;MQRankSum=-3.375;QD=45.57;ReadPosRankSum=1.597;VQSLOD=4.3678;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,44:45:99:2051,108,0	0/0:11,0:11:33.11:0,33,878	0/0:18,0:18:48.15:0,48,1049	0/0:24,0:24:63.22:0,63,1508	0/0:39,0:39:99:0,108,2858	0/0:25,0:25:75.26:0,75,1988	1/1:2,26:28:66.23:1253,66,0	0/0:36,0:36:96.33:0,96,2554	0/0:39,0:38:99:0,117,3020	0/0:30,0:30:84.29:0,84,2245	0/0:16,0:16:48.16:0,48,1283	0/0:44,0:44:99:0,126,3365	0/0:32,0:32:90.31:0,90,2400	0/0:32,0:32:96.33:0,96,2582	0/0:39,0:39:99:0,111,2978	0/0:51,0:51:99:0,151,4049	0/0:30,0:30:87.27:0,87,2264	1/1:0,17:17:42.14:797,42,0	0/0:23,0:23:63.22:0,63,1676	0/0:23,0:23:63.22:0,63,1664	0/0:66,0:66:99:0,187,4801	0/0:21,0:21:60.21:0,60,1593	0/0:19,0:19:54.18:0,54,1458	0/0:32,0:32:93.31:0,93,2454	0/0:22,0:22:66.23:0,66,1758	0/0:35,0:35:99:0,102,2754	0/0:38,0:38:99:0,108,2902	0/0:8,0:8:24.08:0,24,648
chr10	83028166	.	T	TA	3511.76	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=0.061;DP=391;FS=6.971;HRun=8;HaplotypeScore=50.6945;InbreedingCoeff=0.0048;MQ=72.68;MQ0=7;MQRankSum=-1.735;QD=10.39;ReadPosRankSum=5.281;VQSLOD=1.0161;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:27:30.05:330,30,0	0/1:7,0:7:9.10:14,0,9	0/0:30,0:12:20.97:0,21,179	0/0:20,0:16:19.38:0,19,131	0/1:8,0:8:18.26:18,0,24	0/1:10,0:10:20.10:20,0,44	1/1:6,15:21:35.71:415,36,0	1/1:3,12:14:36.04:367,36,0	0/1:17,0:17:40.21:62,0,40	0/1:16,0:15:44.81:45,0,58	0/1:9,0:9:9.65:10,0,33	0/1:9,0:8:11.87:12,0,47	0/1:10,0:9:8.21:39,0,8	0/1:6,0:6:18.45:18,0,36	0/1:15,0:15:27.58:28,0,84	0/0:3,0:3:5.92:0,6,40	1/1:20,1:21:3.07:130,3,0	1/1:6,13:19:21.20:220,21,0	1/1:5,17:21:44.83:451,45,0	1/1:4,6:9:17.97:175,18,0	1/1:1,10:11:13.28:141,13,0	0/1:10,0:10:4.82:5,0,59	1/1:11,0:10:9.10:44,9,0	1/1:11,0:11:1.16:23,1,0	0/1:13,0:13:14.77:15,0,32	1/1:4,15:19:24.77:412,25,0	1/1:3,15:18:36.11:415,36,0	1/1:0,3:3:9.03:104,9,0
chr10	83028174	.	A	AG	2911.63	PASS	AB=0.922;AC=46;AF=0.852;AN=54;BaseQRankSum=-1.208;DP=408;FS=4.533;HRun=9;HaplotypeScore=53.2604;InbreedingCoeff=0.2993;MQ=65.72;MQ0=26;MQRankSum=0.969;QD=8.51;ReadPosRankSum=5.799;VQSLOD=1.0628;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:25:14.77:84,15,0	1/1:2,4:7:11.95:116,12,0	0/0:37,0:11:14.79:0,15,115	0/0:26,0:14:13.93:0,14,124	1/1:4,6:10:6.01:66,6,0	1/1:3,8:11:18.05:199,18,0	1/1:17,0:17:16.88:103,17,0	1/1:19,0:16:2.83:45,3,0	1/1:7,11:18:25.31:262,25,0	1/1:9,7:15:21:217,21,0	1/1:4,7:10:9.02:99,9,0	1/1:8,3:8:9.02:99,9,0	1/1:3,7:8:15.03:157,15,0	1/1:2,5:8:6.02:66,6,0	1/1:5,7:13:12.03:132,12,0	./.	1/1:5,15:20:41.90:444,42,0	1/1:15,1:16:6.77:74,7,0	1/1:22,0:21:12.05:112,12,0	0/1:9,0:8:9.79:19,0,10	0/1:10,0:10:6.93:29,0,7	0/1:6,5:11:13.98:87,0,14	1/1:5,5:10:8.94:83,9,0	1/1:2,8:10:15.02:155,15,0	1/1:7,7:14:12.03:133,12,0	1/1:17,0:15:22.05:83,22,0	1/1:18,0:18:35.86:169,36,0	0/1:5,0:5:21.68:22,0,25
chr10	83029802	.	C	CGTGTGT	4066.32	PASS	AB=0.938;AC=39;AF=0.780;AN=50;BaseQRankSum=-4.170;DP=548;FS=13.174;HRun=0;HaplotypeScore=190.4868;InbreedingCoeff=0.3585;MQ=55.43;MQ0=3;MQRankSum=-1.915;QD=9.99;ReadPosRankSum=-1.267;VQSLOD=1.6667;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:35:8.96:140,9,0	1/1:8,3:11:3.01:55,3,0	./.	0/0:12,0:7:2.40:0,2,36	1/1:24,0:24:12.01:191,12,0	0/1:17,1:22:15.34:272,0,15	1/1:22,0:21:6.02:85,6,0	1/1:32,0:32:30.91:379,31,0	1/1:8,1:12:6.02:105,6,0	0/1:18,0:18:63.37:63,0,254	1/1:12,0:12:6.01:95,6,0	1/1:12,0:13:7.58:129,8,0	1/1:11,0:12:0.47:1,0,0	./.	./.	0/0:30,0:30:35.44:0,35,308	0/1:19,0:19:46.44:62,0,46	1/1:15,0:16:15.05:270,15,0	1/1:25,0:25:28.29:412,28,0	1/1:14,0:14:6.49:139,6,0	0/0:40,0:42:26.67:0,27,226	1/1:16,0:16:2.99:24,3,0	0/0:11,0:12:2.61:0,3,18	1/1:18,0:19:5.81:61,6,0	1/1:20,0:20:5.78:106,6,0	1/1:22,0:22:33.11:552,33,0	1/1:12,0:14:15.04:343,15,0	1/1:26,0:26:36.56:582,37,0
chr10	83029828	.	TGTGC	T	982.75	PASS	AB=1.000;AC=17;AF=0.327;AN=52;BaseQRankSum=2.794;DP=482;FS=1.183;HRun=0;HaplotypeScore=172.8907;InbreedingCoeff=-0.2135;MQ=41.85;MQ0=7;MQRankSum=-1.016;QD=2.98;ReadPosRankSum=2.167;VQSLOD=2.2626;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:38:67.74:68,0,96	0/0:7,0:7:2.96:0,3,19	./.	0/0:11,0:6:10.84:0,11,109	0/0:16,0:16:1.04:0,1,4	0/1:21,0:21:4.09:4,0,95	0/1:23,0:22:59.36:120,0,59	0/1:30,0:29:33.03:33,0,194	0/1:7,0:7:6.38:6,0,11	0/0:18,0:18:16.20:0,16,585	0/0:12,0:12:4.81:0,5,30	0/0:11,0:11:5.71:0,6,40	0/0:9,0:9:3.47:0,3,26	0/0:9,0:9:2.60:0,3,10	./.	0/1:27,0:27:32.02:104,0,32	0/1:12,0:12:8.86:9,0,23	0/1:17,0:17:56.38:56,0,109	0/1:20,0:18:48.72:49,0,200	0/1:14,0:14:13.07:13,0,59	1/1:37,5:41:6.51:544,7,0	0/0:16,0:15:8.96:0,9,70	0/0:16,0:15:10.96:0,11,88	0/1:17,0:17:18.79:19,0,19	1/1:15,0:14:14.02:70,14,0	0/1:20,0:20:22.17:22,0,159	0/0:10,0:10:14.34:0,14,133	0/1:25,0:24:12.80:13,0,311
chr10	83029830	.	TGCGCGC	T	1427.74	PASS	AB=0.982;AC=32;AF=0.571;AN=56;BaseQRankSum=-3.471;DP=465;FS=1.391;HRun=0;HaplotypeScore=178.0288;InbreedingCoeff=0.0117;MQ=42.90;MQ0=6;MQRankSum=-0.450;QD=3.79;ReadPosRankSum=-2.905;VQSLOD=2.3862;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:38:27.88:28,0,50	0/0:7,0:7:0.94:0,1,2	0/0:7,0:3:2.90:0,3,16	0/0:9,0:6:4.04:0,4,19	1/1:14,0:15:11.94:90,12,0	0/1:20,0:21:55.31:55,0,62	0/1:24,0:23:0.62:1,0,76	0/1:27,0:26:49.53:52,0,50	1/1:8,0:8:3.48:32,3,0	0/1:18,0:18:25.62:26,0,230	1/1:12,0:12:5.55:49,6,0	0/1:8,0:10:24.07:41,0,24	1/1:7,0:8:0.47:1,0,0	1/1:8,0:8:2.92:17,3,0	0/1:10,0:9:0:0,0,0	1/1:11,10:26:36.12:668,36,0	1/1:8,2:10:9.87:110,10,0	0/1:17,0:17:6.12:6,0,84	0/1:17,0:15:10.71:11,0,61	0/0:14,0:14:6.61:0,7,36	0/0:41,0:40:5.71:0,6,165	1/1:15,0:15:2.77:24,3,0	0/1:16,0:15:15.99:17,0,16	1/1:17,0:16:9.43:58,9,0	1/1:9,6:14:15.01:205,15,0	0/1:19,0:19:35.69:36,0,80	0/0:10,0:10:18.11:0,18,119	0/1:23,0:22:57.73:58,0,151
chr10	83029832	.	C	CGT	1414.47	PASS	AB=0.964;AC=35;AF=0.625;AN=56;BaseQRankSum=-2.557;DP=396;FS=16.903;HRun=0;HaplotypeScore=150.8448;InbreedingCoeff=0.1880;MQ=45.81;MQ0=6;MQRankSum=0.591;QD=4.12;ReadPosRankSum=-3.282;VQSLOD=0.9415;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:32:10.50:16,0,10	0/0:6,1:7:2.55:0,3,13	0/1:8,0:4:7.37:7,0,15	0/0:9,0:6:5.01:0,5,27	1/1:14,0:14:12:119,12,0	0/1:14,1:19:0.03:176,0,0	1/1:18,0:18:4.70:40,5,0	1/1:20,0:19:16.02:108,16,0	0/1:8,0:8:10.25:19,0,10	0/1:17,0:18:37.04:37,0,190	1/1:11,0:12:2.72:20,3,0	1/1:8,0:8:6.41:51,6,0	0/1:7,0:7:0:0,0,0	0/0:8,0:8:2.68:0,3,11	0/1:7,1:7:0:0,0,0	0/0:15,0:15:33.13:0,33,149	0/1:7,0:7:6.40:13,0,6	1/1:14,0:14:10.82:93,11,0	0/1:15,0:13:13.87:14,0,32	1/1:14,0:14:4.29:29,4,0	0/1:38,1:39:1.22:142,0,1	0/1:13,0:12:0:0,0,0	0/0:8,0:13:2.73:0,3,19	1/1:11,3:13:11.87:109,12,0	1/1:7,0:6:2.24:50,2,0	1/1:18,0:18:17.41:207,17,0	1/1:9,0:9:8.15:106,8,0	1/1:20,0:19:22.03:205,22,0
chr10	83029836	.	CGT	C	518.31	PASS	AB=0.980;AC=29;AF=0.537;AN=54;BaseQRankSum=1.854;DP=370;FS=25.854;HRun=0;HaplotypeScore=143.8915;InbreedingCoeff=-0.0844;MQ=45.96;MQ0=5;MQRankSum=-0.379;QD=1.69;ReadPosRankSum=4.721;VQSLOD=0.7519;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:33:4.55:5,0,18	0/0:7,1:8:2.96:0,3,19	0/0:6,0:3:3.71:0,4,54	0/0:6,0:3:1.39:0,1,5	1/1:10,2:12:0.13:16,0,0	0/1:16,2:18:20.90:34,0,21	0/1:20,0:20:4.09:4,0,14	0/0:17,1:17:4.27:0,4,89	0/1:8,0:8:7.34:7,0,11	0/1:15,1:16:19.87:20,0,204	1/1:9,3:12:2.61:25,3,0	0/0:6,0:6:2.81:0,3,19	./.	1/1:6,1:7:0.88:2,1,0	0/1:5,0:4:0:0,0,0	1/1:15,0:15:33.92:166,34,0	1/1:2,0:2:5.34:23,5,0	0/1:15,0:15:4.95:5,0,40	0/1:11,0:9:25:25,0,26	0/1:15,0:15:8.82:9,0,16	1/1:41,0:41:18.99:97,19,0	0/0:11,2:12:0:0,0,0	0/1:13,0:12:16.91:17,0,38	1/1:11,2:12:3.86:57,4,0	1/1:7,0:6:13.50:58,13,0	0/1:15,2:17:41.10:41,0,127	0/1:9,0:9:5.22:19,0,5	0/1:16,0:15:28.81:29,0,138
chr10	83029838	.	TGCGCGCGCGCGCGCGGGCGCTCGGGCATGCACA	T	4551.93	PASS	AB=1.000;AC=10;AF=0.185;AN=54;BaseQRankSum=4.451;DP=368;FS=0.783;HRun=0;HaplotypeScore=249.7547;InbreedingCoeff=0.4348;MQ=47.66;MQ0=5;MQRankSum=-3.301;QD=65.97;ReadPosRankSum=2.944;VQSLOD=3.9135;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:41.95:0,42,2873	0/0:8,0:8:6.49:0,6,344	0/0:7,0:4:12.04:0,12,541	0/0:7,0:3:6.44:0,6,100	0/0:13,0:13:3.72:0,4,460	0/0:18,0:18:19.98:0,20,1148	0/0:20,0:20:34.90:0,35,3384	0/0:17,0:16:7.09:0,7,471	0/0:8,0:8:4.31:0,4,21	0/0:14,0:14:33.11:0,33,1969	0/0:11,0:11:2.34:0,2,218	0/0:5,0:5:3.01:0,3,121	0/0:8,0:8:3.01:0,3,342	0/0:9,0:9:6.02:0,6,670	./.	1/1:5,10:15:36.12:2933,36,0	1/1:0,2:2:6.02:429,6,0	0/0:15,0:15:26.88:0,27,1911	0/0:11,0:9:20.80:0,21,1509	0/1:15,0:15:14.18:14,0,1038	0/0:40,0:40:37.35:0,37,2502	1/1:13,0:12:0.47:1,0,0	0/0:13,0:12:11.07:0,11,855	0/0:12,0:11:12.93:0,13,845	1/1:2,5:6:15.05:1138,15,0	0/0:17,0:17:33.56:0,34,2068	0/0:9,0:9:20.86:0,21,1669	0/1:17,0:16:36.83:37,0,2728
chr10	83029852	.	CGG	C	4432.81	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-3.325;DP=351;FS=6.337;HRun=3;HaplotypeScore=117.7423;InbreedingCoeff=0.2785;MQ=59.00;MQ0=2;MQRankSum=-0.093;QD=13.15;ReadPosRankSum=0.562;VQSLOD=1.6392;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,20:35:41.75:462,42,0	1/1:11,0:11:17.79:135,18,0	0/0:7,0:5:4.03:0,4,84	0/1:8,0:6:1.79:2,0,3	1/1:9,0:9:8.95:68,9,0	1/1:18,0:18:7.32:88,7,0	1/1:8,13:21:38.78:508,39,0	1/1:14,5:18:24.64:210,25,0	1/1:6,0:6:3:25,3,0	1/1:15,0:15:11.98:166,12,0	1/1:8,0:8:5.72:49,6,0	1/1:5,0:5:3.47:26,3,0	1/1:7,0:7:11.98:98,12,0	1/1:8,0:8:7.50:48,8,0	1/1:4,0:4:5.99:50,6,0	1/1:15,0:15:34.09:168,34,0	1/1:2,0:2:2.84:14,3,0	1/1:2,11:13:20.92:260,21,0	1/1:1,10:11:26.71:292,27,0	1/1:4,7:11:11.97:153,12,0	1/1:3,31:34:21.07:329,21,0	0/0:7,0:6:0:0,0,0	0/1:14,0:13:20.74:50,0,21	1/1:14,0:13:12.19:108,12,0	0/1:6,0:6:0.11:17,0,0	1/1:13,4:17:31.41:353,31,0	1/1:3,6:9:23.96:270,24,0	1/1:9,8:16:44.36:487,44,0
chr10	83030059	.	AGTCTC	A	6239.81	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.074;DP=591;FS=38.515;HRun=0;HaplotypeScore=58.5833;InbreedingCoeff=0.6433;MQ=68.95;MQ0=128;MQRankSum=-2.998;QD=15.29;ReadPosRankSum=1.308;VQSLOD=2.0472;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:9:18.46:250,18,0	1/1:7,0:5:11.96:124,12,0	0/0:68,0:26:55.35:0,55,837	0/0:109,0:29:53.37:0,53,913	1/1:8,8:11:17.83:129,18,0	1/1:14,0:6:6.01:87,6,0	1/1:22,0:15:38.97:530,39,0	1/1:6,17:21:42.09:711,42,0	1/1:10,0:4:5.98:80,6,0	1/1:8,6:8:12.04:233,12,0	1/1:1,9:10:11.90:85,12,0	1/1:12,0:8:8.97:140,9,0	1/1:9,0:4:5.99:81,6,0	1/1:14,0:8:20.97:342,21,0	1/1:15,0:6:15.04:265,15,0	1/1:15,0:8:23.86:210,24,0	1/1:18,0:14:21.04:371,21,0	1/1:18,0:8:18.02:276,18,0	1/1:5,12:15:30.05:444,30,0	1/1:6,7:8:5.92:39,6,0	1/1:25,0:12:14.98:223,15,0	1/1:3,7:9:5.93:40,6,0	1/1:5,7:7:5.97:47,6,0	1/1:22,0:12:15.02:229,15,0	1/1:18,0:11:23.89:333,24,0	1/1:12,10:12:27.04:432,27,0	1/1:6,0:3:6.02:116,6,0	1/1:15,0:8:21.07:421,21,0
chr10	83032233	.	A	AT	161.64	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.584;DP=402;FS=3.702;HRun=7;HaplotypeScore=40.4934;InbreedingCoeff=0.8055;MQ=76.62;MQ0=0;MQRankSum=0.857;QD=23.09;ReadPosRankSum=0.690;VQSLOD=3.3711;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.10:0,69,666	0/0:2,0:2:6.01:0,6,58	0/0:10,0:10:13.67:0,14,105	0/0:9,0:9:14.69:0,15,126	0/0:9,0:9:27.04:0,27,261	0/0:21,0:21:54.06:0,54,515	0/0:14,0:14:36.06:0,36,348	0/0:47,0:47:99:0,123,1165	0/0:13,0:13:36.06:0,36,348	0/0:15,0:15:42.06:0,42,402	0/0:16,0:16:45.06:0,45,428	0/0:11,0:11:30.04:0,30,290	0/0:14,0:14:39.06:0,39,376	0/0:13,0:13:39.06:0,39,377	0/0:16,0:16:42.05:0,42,400	0/0:19,0:19:54.09:0,54,521	0/0:19,0:19:51.07:0,51,487	0/0:21,0:21:57.05:0,57,542	0/0:19,0:19:45.06:0,45,430	0/0:7,0:7:15.02:0,15,145	1/1:0,7:7:21.06:254,21,0	0/0:3,0:3:9.01:0,9,87	0/0:9,0:9:24.04:0,24,232	0/0:10,0:10:27.04:0,27,261	0/0:8,0:8:18.03:0,18,174	0/0:23,0:23:66.11:0,66,637	0/0:13,0:13:36.05:0,36,348	0/0:8,0:8:24.04:0,24,232
chr10	83032518	.	CA	C	830.89	PASS	AB=0.863;AC=19;AF=0.339;AN=56;BaseQRankSum=-0.805;DP=409;FS=6.440;HRun=14;HaplotypeScore=51.8876;InbreedingCoeff=0.4621;MQ=50.34;MQ0=18;MQRankSum=0.428;QD=4.01;ReadPosRankSum=0.163;VQSLOD=0.3154;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:27,6:30:5.88:105,0,6	0/0:4,0:4:8.97:0,9,76	0/0:18,0:6:10.10:0,10,64	0/0:17,0:5:8.56:0,9,54	0/0:9,0:10:3:0,3,28	0/0:19,0:19:11.71:0,12,150	1/1:7,6:13:11.86:82,12,0	1/1:15,16:29:42.61:284,43,0	0/1:17,0:17:2.63:3,0,100	0/0:10,0:12:13.92:0,14,147	0/1:8,1:8:5.66:6,0,79	0/0:6,0:6:8.95:0,9,71	0/0:9,0:9:11.87:0,12,92	0/0:6,0:6:0.88:0,1,2	0/0:15,0:15:14.91:0,15,124	0/0:13,0:13:11.82:0,12,93	0/0:24,0:24:12.40:0,12,237	0/1:13,11:24:13.12:68,0,13	1/1:12,10:21:25.02:195,25,0	1/1:3,2:5:5.92:41,6,0	0/0:10,3:13:0.47:0,0,146	0/0:3,0:4:2.84:0,3,14	0/1:8,1:9:10.36:10,0,41	0/0:15,0:16:20.46:0,20,199	0/0:13,0:12:9:0,9,80	1/1:9,8:18:12.15:85,12,0	1/1:9,5:15:4.89:26,5,0	1/1:3,6:9:14.86:103,15,0
chr10	83033462	.	TA	T	14867.49	PASS	AB=0.917;AC=53;AF=0.946;AN=56;BaseQRankSum=-5.144;DP=669;FS=0.836;HRun=9;HaplotypeScore=70.4604;InbreedingCoeff=0.8222;MQ=81.26;MQ0=1;MQRankSum=-7.021;QD=23.12;ReadPosRankSum=4.587;VQSLOD=5.4905;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,39:43:99:1015,111,0	1/1:1,11:12:27.01:247,27,0	0/0:26,0:26:39.06:0,39,444	0/1:10,1:10:1.21:1,0,113	1/1:3,27:30:81.04:741,81,0	1/1:1,25:26:75.04:686,75,0	1/1:2,21:23:57.03:522,57,0	1/1:12,34:46:99:913,102,0	1/1:4,22:26:49.22:584,49,0	1/1:3,23:26:63.03:577,63,0	1/1:2,17:19:48.02:439,48,0	1/1:3,23:26:63.03:577,63,0	1/1:1,20:21:57.02:522,57,0	1/1:2,17:20:41.06:363,41,0	1/1:0,24:24:69.04:632,69,0	1/1:1,26:27:78.04:714,78,0	1/1:2,26:28:75.04:686,75,0	1/1:1,15:16:39.02:357,39,0	1/1:0,20:20:60.03:546,60,0	1/1:3,18:21:51.02:467,51,0	1/1:2,24:26:72.04:659,72,0	1/1:5,20:25:54.02:494,54,0	1/1:2,12:14:30.01:275,30,0	1/1:2,23:25:63.03:577,63,0	1/1:3,12:15:33.01:302,33,0	1/1:0,31:31:93.03:846,93,0	1/1:1,23:24:69.04:632,69,0	1/1:0,18:18:54.03:494,54,0
chr10	83033981	.	C	CT	64.46	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-4.591;DP=506;FS=0.000;HRun=11;HaplotypeScore=50.2533;InbreedingCoeff=0.5221;MQ=61.97;MQ0=7;MQRankSum=0.592;QD=4.03;ReadPosRankSum=-1.643;VQSLOD=-0.4868;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:68.69:0,69,534	0/0:6,0:6:14.92:0,15,116	0/1:9,0:8:2.22:2,0,27	0/0:8,0:2:2.68:0,3,11	0/0:27,0:27:62.72:0,63,485	0/0:16,0:16:38.83:0,39,301	0/0:12,0:12:20.91:0,21,162	0/0:30,0:30:55.81:0,56,476	0/0:21,0:21:50.76:0,51,393	0/0:20,0:19:35.84:0,36,279	0/0:23,1:25:34.37:0,34,437	0/0:22,0:22:49.99:0,50,374	0/0:11,0:11:23.87:0,24,186	0/0:24,0:24:61.57:0,62,469	0/0:20,0:20:47.78:0,48,367	0/0:25,0:25:50.74:0,51,390	0/0:23,1:23:29.32:0,29,411	0/0:23,0:23:53.74:0,54,413	0/0:20,2:19:2.37:0,2,198	0/0:23,0:23:47.62:0,48,358	1/1:2,5:7:15.03:152,15,0	0/0:10,0:10:17.92:0,18,139	0/0:9,0:9:23.90:0,24,185	0/0:14,0:14:26.83:0,27,204	0/0:13,0:13:32.83:0,33,252	0/0:20,0:20:47.76:0,48,370	0/0:19,0:19:35.79:0,36,278	0/0:12,1:12:5.58:0,6,225
chr10	83034606	.	GA	G	2323.83	PASS	AB=0.722;AC=34;AF=0.607;AN=56;BaseQRankSum=2.948;DP=582;FS=3.833;HRun=16;HaplotypeScore=70.1073;InbreedingCoeff=-0.2354;MQ=57.90;MQ0=6;MQRankSum=-0.457;QD=4.44;ReadPosRankSum=4.799;VQSLOD=1.3655;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,5:34:2.11:0,2,297	0/1:5,3:7:7.12:27,0,7	0/1:5,2:4:8.70:9,0,53	0/0:4,0:1:2.98:0,3,21	1/1:12,8:20:24.86:148,25,0	0/1:9,19:29:20.10:190,0,20	0/0:17,0:20:38.76:0,39,310	0/1:16,7:24:28.40:58,0,28	1/1:5,5:10:8.77:54,9,0	0/1:14,14:29:32.91:149,0,33	0/1:11,9:20:0.24:60,0,0	0/1:9,5:14:33.11:39,0,33	0/1:9,5:14:15.85:16,0,17	1/1:9,9:19:17.40:107,17,0	1/1:11,17:29:36.22:209,36,0	0/1:16,9:26:67.24:86,0,67	1/1:14,16:32:17.68:256,18,0	1/1:3,10:16:29.55:161,30,0	0/1:13,8:21:66.49:93,0,66	0/1:21,12:32:86.59:161,0,87	1/1:10,0:19:3.14:26,3,0	1/1:7,13:20:1.20:118,1,0	0/1:9,1:11:5.30:5,0,52	0/1:8,20:28:30.87:171,0,31	0/1:16,1:19:27.36:27,0,48	1/1:14,11:26:25.20:149,25,0	0/1:15,12:28:8.85:102,0,9	0/1:9,5:15:15.26:62,0,15
chr10	83035957	.	A	AT	14106.84	PASS	AB=0.576;AC=45;AF=0.804;AN=56;BaseQRankSum=-10.234;DP=686;FS=0.000;HRun=10;HaplotypeScore=68.4011;InbreedingCoeff=0.4854;MQ=74.18;MQ0=0;MQRankSum=-2.505;QD=22.29;ReadPosRankSum=4.053;VQSLOD=5.4600;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,33:38:69.17:736,69,0	0/1:3,8:11:0.58:200,0,1	0/0:16,0:16:29.51:0,30,217	0/0:11,0:13:20.87:0,21,160	1/1:6,21:27:16.68:537,17,0	1/1:4,21:25:57.14:608,57,0	1/1:2,10:12:27.07:288,27,0	1/1:14,29:44:65.35:853,65,0	1/1:3,12:15:8.44:295,8,0	0/1:7,17:24:13.83:471,0,14	1/1:5,24:30:38.27:573,38,0	1/1:4,24:29:47.44:693,47,0	1/1:3,24:27:60.15:640,60,0	1/1:1,24:25:60.15:640,60,0	1/1:5,23:28:60.15:640,60,0	0/1:4,13:17:4.18:371,0,4	0/1:10,18:28:41.43:423,0,41	1/1:6,14:20:22.51:425,23,0	1/1:3,15:18:45.11:480,45,0	1/1:2,27:29:59.56:834,60,0	0/0:22,1:24:20.95:0,21,365	1/1:5,21:27:59.98:621,60,0	1/1:0,18:18:43.69:451,44,0	1/1:2,18:20:54.14:576,54,0	0/1:4,22:26:10.77:513,0,11	1/1:6,37:43:61.91:1041,62,0	1/1:8,23:29:20.07:622,20,0	1/1:2,19:21:54.14:576,54,0
chr10	83037435	.	T	TA	1768.93	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-5.555;DP=574;FS=1.489;HRun=13;HaplotypeScore=64.8997;InbreedingCoeff=0.8982;MQ=64.86;MQ0=3;MQRankSum=0.299;QD=15.65;ReadPosRankSum=-4.705;VQSLOD=2.7572;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:32:34.75:0,35,443	0/0:11,0:11:26.74:0,27,185	0/0:16,0:10:7.92:0,8,47	0/0:15,0:12:14.49:0,14,87	0/0:28,0:28:68.33:0,68,467	0/0:18,1:19:13.73:0,14,236	0/0:18,0:19:37.69:0,38,251	1/1:11,27:38:59.30:611,59,0	0/0:12,0:13:20.77:0,21,144	0/0:24,0:25:47.34:0,47,322	0/0:18,0:18:29.66:0,30,205	0/0:20,1:22:20.52:0,21,243	0/0:15,0:16:43.68:0,44,293	0/0:10,1:12:3.92:0,4,159	0/0:16,0:16:38.53:0,39,261	0/0:19,0:20:13.27:0,13,201	0/0:34,3:38:29.55:0,30,482	0/0:21,0:20:49.53:0,50,334	1/1:7,18:22:47.83:410,48,0	1/1:5,25:30:62.43:510,62,0	0/0:2,0:9:8.15:0,8,24	0/0:12,0:12:14.70:0,15,118	0/0:12,0:12:22.80:0,23,149	0/0:18,1:19:19.78:0,20,280	0/0:22,0:22:53.22:0,53,357	0/0:27,0:27:55.68:0,56,384	1/1:2,17:20:28.01:398,28,0	0/0:16,0:16:31.84:0,32,210
chr10	83039574	.	CG	C	16044.49	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.075;DP=600;FS=0.000;HRun=6;HaplotypeScore=71.6499;InbreedingCoeff=0.9130;MQ=78.24;MQ0=0;MQRankSum=-7.589;QD=28.00;ReadPosRankSum=5.264;VQSLOD=5.0891;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:66.16:709,66,0	1/1:0,2:2:3.01:32,3,0	0/0:13,0:12:24.89:0,25,260	0/0:14,0:14:31.51:0,32,333	1/1:1,15:16:39.10:418,39,0	1/1:2,22:24:66.17:708,66,0	1/1:1,25:26:75.19:806,75,0	1/1:3,22:25:60.12:628,60,0	1/1:2,17:19:48.12:515,48,0	1/1:0,28:28:84.19:891,84,0	1/1:0,11:11:33.08:354,33,0	1/1:3,29:32:78.20:838,78,0	1/1:2,18:20:51.13:547,51,0	1/1:3,27:30:71.95:773,72,0	1/1:2,31:33:81.20:870,81,0	1/1:1,18:19:48.12:515,48,0	1/1:0,26:26:78.20:838,78,0	1/1:3,22:25:66.16:709,66,0	1/1:1,21:22:63.16:676,63,0	1/1:0,14:14:36.09:387,36,0	1/1:4,45:49:99:1353,126,0	1/1:2,18:20:48.12:515,48,0	1/1:2,13:15:36.09:387,36,0	1/1:0,17:17:48.12:516,48,0	1/1:1,12:13:27.07:290,27,0	1/1:3,32:35:93.23:998,93,0	1/1:2,18:20:51.13:547,51,0	1/1:0,7:7:21.05:225,21,0
chr10	83039773	.	CG	C	11888.97	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=12.234;DP=659;FS=0.607;HRun=2;HaplotypeScore=69.6112;InbreedingCoeff=0.9996;MQ=84.74;MQ0=0;MQRankSum=-1.701;QD=32.93;ReadPosRankSum=6.040;VQSLOD=4.4508;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1595	1/1:0,11:11:30.10:388,30,0	0/0:23,0:23:66.17:0,66,890	0/0:18,0:18:48.90:0,49,640	1/1:1,20:21:57.01:707,57,0	1/1:0,21:21:63.20:815,63,0	0/0:29,0:29:87.15:0,87,1186	0/0:24,0:24:51.07:0,51,635	1/1:0,17:17:45.15:581,45,0	1/1:1,17:18:48.08:591,48,0	1/1:0,11:11:27.09:347,27,0	1/1:0,26:26:69.22:893,69,0	1/1:0,24:24:60.20:776,60,0	1/1:0,27:27:72.23:932,72,0	1/1:0,32:32:87.28:1126,87,0	1/1:0,24:24:57.18:738,57,0	1/1:0,51:51:99:1671,129,0	0/0:41,0:41:99:0,120,1698	0/0:19,0:19:57.08:0,57,723	0/0:19,0:19:54.10:0,54,747	0/0:30,0:30:90.15:0,90,1253	1/1:0,21:21:48.16:621,48,0	1/1:0,17:17:39.13:500,39,0	1/1:1,20:21:51.17:660,51,0	1/1:0,19:19:42.14:543,42,0	0/0:23,0:23:69.15:0,69,959	0/0:27,0:27:81.18:0,81,1147	0/0:9,0:9:27.03:0,27,335
chr10	83040461	.	GGC	G	3107.77	PASS	AB=0.998;AC=28;AF=0.500;AN=56;BaseQRankSum=-6.162;DP=469;FS=16.248;HRun=0;HaplotypeScore=100.0246;InbreedingCoeff=-0.4830;MQ=84.85;MQ0=0;MQRankSum=-2.712;QD=7.19;ReadPosRankSum=-5.135;VQSLOD=0.6837;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:40.43:106,0,40	0/1:7,0:7:9.05:9,0,86	0/0:12,0:12:7.07:0,7,359	0/0:21,0:21:54:0,54,828	0/1:11,0:11:8.50:8,0,75	0/1:12,0:12:36.09:59,0,36	0/1:19,0:19:11.55:12,0,176	0/1:18,0:18:25.27:196,0,25	0/1:24,0:24:2.35:2,0,131	0/1:12,0:12:23.53:66,0,24	0/1:11,0:11:10.92:11,0,64	0/1:18,0:18:44.68:64,0,45	0/1:10,0:10:3.70:78,0,4	0/1:22,0:22:4.75:79,0,5	0/1:18,0:18:76.15:113,0,76	0/1:15,0:15:54.49:63,0,54	0/1:24,0:24:95.03:115,0,95	0/1:24,0:24:8.99:9,0,180	0/1:14,0:14:29.88:72,0,30	0/1:9,0:9:3.30:73,0,3	1/1:2,50:52:99:1506,102,0	0/1:10,0:10:25.01:25,0,27	0/0:4,0:4:3.41:0,3,18	0/1:24,0:24:12.75:126,0,13	0/1:10,0:10:21.36:33,0,21	1/1:19,1:20:35.98:245,36,0	0/1:24,1:25:99:118,0,183	1/1:8,1:9:10.80:76,11,0
chr10	83040462	.	GC	G	5045.56	PASS	AB=0.988;AC=46;AF=0.821;AN=56;BaseQRankSum=-0.211;DP=467;FS=9.174;HRun=1;HaplotypeScore=90.2976;InbreedingCoeff=0.3761;MQ=84.19;MQ0=0;MQRankSum=-4.514;QD=11.60;ReadPosRankSum=-8.315;VQSLOD=-0.1773;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:13,1:14:26.98:246,27,0	0/1:7,0:7:12.87:22,0,13	0/0:12,0:12:16.76:0,17,302	0/0:20,0:20:52.54:0,53,632	0/1:11,0:11:0.19:32,0,0	1/1:12,0:12:17.15:156,17,0	0/1:19,0:19:6.39:97,0,6	1/1:18,0:18:34.22:280,34,0	1/1:25,0:25:39.66:238,40,0	1/1:10,3:13:15.08:201,15,0	0/1:10,0:10:0.09:68,0,0	1/1:20,0:20:25.46:177,25,0	1/1:9,1:10:20.84:180,21,0	1/1:21,0:21:27.08:200,27,0	1/1:16,2:18:12.70:289,13,0	1/1:15,0:15:26.46:171,26,0	1/1:22,1:23:43.65:283,44,0	0/1:22,0:22:5.08:133,0,5	1/1:12,2:14:22.79:173,23,0	1/1:7,2:9:19.50:217,20,0	1/1:51,1:52:99:725,101,0	1/1:10,0:10:10.89:89,11,0	1/1:4,0:4:0.43:1,0,0	1/1:23,1:24:30.42:249,30,0	1/1:10,0:10:12.70:85,13,0	1/1:1,19:20:41.81:391,42,0	0/1:23,2:25:3.75:196,0,4	1/1:1,8:9:12.01:146,12,0
chr10	83041558	.	AG	A	6625.47	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=1.578;DP=533;FS=4.538;HRun=9;HaplotypeScore=61.1158;InbreedingCoeff=0.9713;MQ=77.11;MQ0=1;MQRankSum=1.114;QD=21.72;ReadPosRankSum=4.131;VQSLOD=5.7243;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:33:68.28:0,68,362	1/1:0,3:3:9:82,9,0	0/0:13,0:10:14.92:0,15,156	0/0:16,0:16:22.76:0,23,228	1/1:8,17:25:53.97:486,54,0	1/1:3,18:21:48.01:439,48,0	0/0:7,0:20:34.24:0,34,181	0/0:25,0:27:44.62:0,45,444	1/1:3,20:23:54.03:494,54,0	1/1:2,14:16:42.02:384,42,0	1/1:3,16:19:10.44:349,10,0	1/1:4,11:15:36.02:329,36,0	1/1:3,9:12:27.01:247,27,0	1/1:1,14:15:36.02:329,36,0	1/1:1,22:23:48.03:439,48,0	1/1:3,26:29:75.04:686,75,0	1/1:3,30:33:84.04:769,84,0	0/0:14,1:15:8.63:0,9,343	0/0:23,1:24:20.66:0,21,481	0/0:13,0:13:24.07:0,24,277	0/0:8,0:14:17.28:0,17,107	1/1:0,15:15:45.02:412,45,0	1/1:3,20:23:60.02:548,60,0	1/1:2,12:14:27.01:247,27,0	1/1:2,17:19:42.02:384,42,0	0/0:20,1:21:26.59:0,27,542	0/0:22,0:22:60.13:0,60,669	0/0:9,0:9:24.06:0,24,267
chr10	83042113	.	T	TACACACACACACACAC	12509.05	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=-1.813;DP=590;FS=5.222;HRun=0;HaplotypeScore=240.2943;InbreedingCoeff=0.3799;MQ=61.10;MQ0=11;MQRankSum=-2.055;QD=24.24;ReadPosRankSum=0.277;VQSLOD=3.0040;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:42:12.51:347,13,0	1/1:12,0:12:0.47:1,0,0	0/0:41,0:22:9.02:0,9,199	0/0:27,0:19:2.98:0,3,22	1/1:17,0:17:9.49:362,9,0	1/1:15,0:15:9.03:417,9,0	1/1:29,0:34:12.93:299,13,0	1/1:27,0:26:42.13:1444,42,0	1/1:22,4:25:6.96:456,7,0	1/1:21,0:20:27.09:1226,27,0	1/1:12,0:12:3.01:89,3,0	1/1:22,0:22:2.76:226,3,0	1/1:15,0:14:12.04:453,12,0	1/1:21,0:20:12.04:319,12,0	1/1:14,0:14:3.90:193,4,0	1/1:15,1:18:9.03:424,9,0	1/1:24,0:24:33.11:1474,33,0	1/1:13,0:17:15.05:773,15,0	1/1:27,0:23:15.05:527,15,0	1/1:12,0:16:6.49:339,6,0	1/1:22,1:25:9.03:409,9,0	1/1:18,0:17:1.85:88,2,0	1/1:11,0:15:3.01:44,3,0	1/1:22,0:21:3.01:227,3,0	1/1:12,4:16:6.02:454,6,0	1/1:23,0:22:38.59:1663,39,0	1/1:13,0:12:12.02:253,12,0	./.
chr10	83049821	.	GTC	G	2480.30	PASS	AB=0.929;AC=15;AF=0.268;AN=56;BaseQRankSum=9.447;DP=759;FS=0.829;HRun=0;HaplotypeScore=100.9433;InbreedingCoeff=0.5490;MQ=73.38;MQ0=8;MQRankSum=-0.304;QD=9.12;ReadPosRankSum=-1.463;VQSLOD=2.9242;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.12:0,90,1168	0/0:11,0:11:27.08:0,27,414	0/0:29,0:15:11.86:0,12,127	0/0:41,0:32:58.49:0,58,663	0/0:14,0:14:36.03:0,36,478	0/0:21,0:21:60.15:0,60,886	0/1:35,2:37:7.85:8,0,981	1/1:12,14:26:45.02:504,45,0	0/0:21,0:21:60.10:0,60,848	0/0:27,2:29:6.71:0,7,856	0/0:26,2:28:26.20:0,26,696	0/1:32,2:34:3.61:4,0,959	0/1:22,4:26:13.09:13,0,755	0/0:30,1:31:32.52:0,33,910	0/0:32,3:35:22.97:0,23,1242	0/0:31,0:31:78.20:0,78,1127	0/0:38,0:38:50.64:0,51,1245	0/1:20,3:22:16.17:16,0,671	1/1:3,8:10:20.60:212,21,0	1/1:1,15:15:30.09:366,30,0	1/1:9,42:53:86.94:1017,87,0	0/0:27,0:27:44.39:0,44,831	0/0:16,0:16:42.05:0,42,537	0/0:45,1:46:9.57:0,10,1398	0/0:22,0:22:51.16:0,51,798	0/1:32,0:32:99:194,0,280	1/1:2,12:13:26.76:329,27,0	0/0:13,0:13:10.06:0,10,207
chr10	83051188	.	AG	A	10606.26	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=5.713;DP=620;FS=0.493;HRun=9;HaplotypeScore=74.3593;InbreedingCoeff=0.9337;MQ=74.88;MQ0=1;MQRankSum=-1.466;QD=20.88;ReadPosRankSum=5.115;VQSLOD=5.2650;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:66.19:0,66,760	1/1:3,7:10:15.01:137,15,0	0/0:28,1:22:3.69:0,4,307	0/0:23,0:17:13.31:0,13,170	1/1:3,11:14:36.01:329,36,0	1/1:2,22:24:60:542,60,0	0/0:31,0:31:75.21:0,75,855	1/1:9,25:34:68.87:605,69,0	1/1:5,24:29:56.83:521,57,0	1/1:1,14:15:36.01:328,36,0	1/1:1,10:11:20.77:160,21,0	1/1:4,26:30:63.03:576,63,0	1/1:6,18:25:47.24:419,47,0	1/1:2,22:24:60.03:549,60,0	1/1:2,24:26:60:542,60,0	1/1:1,23:24:66.04:604,66,0	1/1:3,25:28:60.03:549,60,0	1/1:3,17:20:51.02:467,51,0	1/1:1,14:15:41.98:370,42,0	1/1:0,7:7:20.98:185,21,0	1/1:3,49:52:99:1262,138,0	1/1:2,15:18:15.46:375,15,0	1/1:0,14:14:42.02:384,42,0	1/1:4,23:27:51.02:467,51,0	1/1:1,6:7:18.01:165,18,0	1/1:8,20:28:60.02:549,60,0	1/1:3,13:16:36.02:329,36,0	1/1:3,7:10:21.01:192,21,0
chr10	83053166	.	T	TG	10664.89	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=10.469;DP=570;FS=4.493;HRun=7;HaplotypeScore=88.2307;InbreedingCoeff=0.9643;MQ=87.03;MQ0=0;MQRankSum=-3.321;QD=23.44;ReadPosRankSum=2.946;VQSLOD=5.2671;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,123,1179	1/1:1,5:6:15.05:180,15,0	0/0:30,0:30:56.78:0,57,587	0/0:16,0:17:31.76:0,32,363	1/1:0,11:11:33.05:380,33,0	1/1:4,21:25:54.16:639,54,0	0/0:21,0:21:57.07:0,57,543	1/1:13,0:19:17.35:100,17,0	1/1:3,17:20:42.13:501,42,0	1/1:9,8:17:21.06:251,21,0	1/1:3,9:12:24.07:288,24,0	1/1:4,25:29:60.14:705,60,0	1/1:4,11:15:20.29:380,20,0	1/1:3,18:21:39.12:468,39,0	1/1:6,23:29:50.32:740,50,0	1/1:2,14:16:39.12:468,39,0	1/1:4,17:21:42.13:504,42,0	1/1:2,18:20:45.14:540,45,0	1/1:7,9:16:35.58:384,36,0	1/1:8,18:26:24.22:509,24,0	1/1:5,34:39:78.24:935,78,0	1/1:3,7:11:24.07:283,24,0	1/1:3,13:17:26.64:302,27,0	1/1:4,26:30:72.22:859,72,0	1/1:2,8:10:24.01:270,24,0	1/1:10,3:15:16.81:174,17,0	1/1:3,23:26:40.88:759,41,0	1/1:3,0:4:7.69:43,8,0
chr10	83053361	.	C	CA	2687.84	PASS	AB=0.781;AC=16;AF=0.286;AN=56;BaseQRankSum=-0.109;DP=571;FS=2.445;HRun=10;HaplotypeScore=80.0102;InbreedingCoeff=0.8055;MQ=60.74;MQ0=14;MQRankSum=0.693;QD=14.15;ReadPosRankSum=-0.688;VQSLOD=3.8485;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:32:51.98:0,52,552	0/0:6,0:6:14.98:0,15,123	0/0:22,0:6:13.02:0,13,89	0/0:21,0:8:9.50:0,9,72	0/0:19,0:20:40.96:0,41,326	0/0:19,0:19:47.92:0,48,391	0/0:20,0:20:47.93:0,48,394	1/1:9,16:24:26.06:405,26,0	0/0:22,0:23:58.92:0,59,471	0/0:23,0:23:53.92:0,54,443	0/0:11,0:10:14.98:0,15,123	0/0:29,0:30:64.30:0,64,502	0/0:16,0:16:41.95:0,42,345	0/0:9,0:9:17.95:0,18,145	0/0:25,0:25:59.89:0,60,490	0/0:19,0:19:50.68:0,51,418	0/0:27,0:28:82.92:0,83,667	1/1:6,23:29:57.14:608,57,0	1/1:10,11:23:44.67:401,45,0	1/1:3,12:15:27.06:284,27,0	0/1:9,7:16:46.86:165,0,47	0/1:22,4:26:10.09:10,0,339	0/0:13,0:14:22.99:0,23,178	0/0:22,0:22:62.65:0,63,507	0/0:21,0:21:44.67:0,45,357	1/1:12,19:32:50.89:497,51,0	1/1:3,13:16:11.52:325,12,0	1/1:1,7:8:18.05:192,18,0
chr10	83054886	.	T	TG	7056.59	PASS	AB=0.773;AC=32;AF=0.571;AN=56;BaseQRankSum=-6.172;DP=582;FS=1.555;HRun=8;HaplotypeScore=72.5799;InbreedingCoeff=0.8711;MQ=75.93;MQ0=0;MQRankSum=-1.732;QD=22.12;ReadPosRankSum=3.744;VQSLOD=5.4007;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:92.58:0,93,869	1/1:0,5:5:15.04:173,15,0	0/0:14,0:13:13.25:0,13,191	0/1:16,0:16:33.73:34,0,77	1/1:4,11:16:30.04:331,30,0	1/1:6,12:18:27.08:312,27,0	0/0:27,1:28:25.40:0,25,487	0/0:26,0:26:49.81:0,50,445	1/1:1,18:19:54.16:623,54,0	1/1:9,13:22:30.07:334,30,0	0/1:2,9:12:0.17:250,0,0	1/1:9,23:32:63.19:725,63,0	1/1:4,14:18:33.10:381,33,0	1/1:1,21:22:54.16:623,54,0	1/1:3,17:20:11.65:388,12,0	1/1:4,11:15:33.10:381,33,0	1/1:5,24:30:75.06:845,75,0	0/0:35,0:35:81.03:0,81,741	0/0:14,0:14:30.01:0,30,275	0/0:18,0:18:51.01:0,51,460	0/0:42,0:42:99:0,111,1008	1/1:6,14:20:36.11:415,36,0	1/1:2,7:9:11.80:138,12,0	1/1:4,23:27:69.20:796,69,0	1/1:5,11:17:27.08:308,27,0	0/0:21,1:22:16.41:0,16,405	0/0:17,0:17:47.97:0,48,427	0/0:7,0:7:18:0,18,163
chr10	83057359	.	T	TC	6826.27	PASS	AB=0.614;AC=36;AF=0.643;AN=56;BaseQRankSum=-7.067;DP=495;FS=0.470;HRun=9;HaplotypeScore=54.8034;InbreedingCoeff=0.0491;MQ=77.27;MQ0=0;MQRankSum=-2.003;QD=16.65;ReadPosRankSum=1.097;VQSLOD=4.7656;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:80.94:0,81,701	0/1:1,5:6:11.02:118,0,11	0/0:13,0:13:3.95:0,4,180	0/0:7,0:7:17.98:0,18,151	1/1:3,15:18:13.09:371,13,0	1/1:5,16:21:33.09:365,33,0	0/0:29,0:30:55.99:0,56,470	0/1:17,11:28:14.86:256,0,15	1/1:1,15:16:45.12:498,45,0	0/1:9,9:18:19.67:240,0,20	0/1:4,14:18:11.18:257,0,11	0/1:6,8:14:66.95:198,0,67	1/1:1,12:13:24.06:265,24,0	0/1:8,10:18:6.95:365,0,7	1/1:3,18:21:33.09:365,33,0	0/1:3,10:13:8.01:148,0,8	0/1:7,21:28:60.99:438,0,61	1/1:5,18:24:12.98:353,13,0	0/1:9,8:18:42.24:220,0,42	1/1:4,15:19:24.18:294,24,0	1/1:1,1:2:5.95:51,6,0	0/1:6,11:17:28.17:175,0,28	0/1:5,9:14:28.05:175,0,28	0/1:6,17:23:13:326,0,13	1/1:1,9:10:21.06:232,21,0	1/1:4,15:19:40.33:424,40,0	1/1:3,19:24:39.10:428,39,0	1/1:0,8:8:24.06:265,24,0
chr10	83059592	.	CT	C	1927.54	PASS	AB=0.836;AC=35;AF=0.625;AN=56;BaseQRankSum=2.194;DP=546;FS=26.291;HRun=15;HaplotypeScore=85.5713;InbreedingCoeff=0.4756;MQ=66.22;MQ0=16;MQRankSum=3.605;QD=5.25;ReadPosRankSum=5.576;VQSLOD=0.5251;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,1:40:36.56:0,37,501	1/1:3,7:10:17.69:115,18,0	0/0:27,0:13:12.95:0,13,85	0/0:22,0:14:17.37:0,17,108	1/1:12,9:21:4.91:97,5,0	1/1:13,9:22:27.15:162,27,0	0/0:22,1:22:9.32:0,9,309	0/1:20,2:22:1.53:2,0,204	0/1:8,8:16:41.69:56,0,42	1/1:8,12:19:29.10:191,29,0	1/1:5,15:21:9.76:202,10,0	1/1:5,9:13:6.74:40,7,0	1/1:8,4:11:15.14:97,15,0	0/1:6,5:10:3.43:45,0,3	1/1:10,7:17:8.65:106,9,0	1/1:5,12:18:31.57:198,32,0	1/1:8,18:28:20.27:251,20,0	0/0:20,0:22:33.20:0,33,277	0/0:25,1:28:9.96:0,10,288	0/1:16,1:18:3.68:4,0,110	1/1:10,4:14:11.28:74,11,0	1/1:2,5:9:15.90:89,16,0	0/1:11,9:19:5.78:94,0,6	1/1:22,7:28:7.36:159,7,0	1/1:10,9:19:4.93:117,5,0	0/1:15,1:16:7.77:8,0,77	0/0:15,0:14:13.07:0,13,92	0/1:4,0:4:10.42:10,0,32
chr10	83059894	.	T	TTTCCTTCC	12818.33	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=5.631;DP=636;FS=0.000;HRun=0;HaplotypeScore=245.8069;InbreedingCoeff=0.5691;MQ=61.84;MQ0=3;MQRankSum=-6.708;QD=25.95;ReadPosRankSum=-0.613;VQSLOD=3.7096;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:28.99:0,29,1580	1/1:9,0:9:14.93:235,15,0	0/0:19,0:14:9.03:0,9,146	0/0:17,0:13:9:0,9,161	1/1:12,0:13:8.12:251,8,0	1/1:26,0:25:35.94:635,36,0	0/0:34,0:33:60.18:0,60,1290	0/1:41,0:38:8.97:105,0,9	1/1:23,0:23:38.25:917,38,0	1/1:15,0:15:25.56:494,26,0	1/1:13,0:13:24.48:522,24,0	1/1:28,0:28:57.94:1174,58,0	1/1:18,0:18:28.05:464,28,0	1/1:23,0:23:33.54:741,34,0	1/1:44,0:43:77.27:1476,77,0	1/1:28,0:27:44.79:927,45,0	1/1:34,0:34:37.78:564,38,0	0/0:13,0:13:3.33:0,3,35	0/1:21,0:20:39.72:40,0,199	0/1:19,0:18:75.87:76,0,125	0/1:36,0:35:53.82:363,0,54	1/1:11,0:11:15.52:330,16,0	1/1:15,0:15:29.04:391,29,0	1/1:27,0:26:42.81:606,43,0	1/1:25,0:25:45.61:936,46,0	1/1:15,6:20:39.13:1322,39,0	0/0:20,0:20:13.84:0,14,340	1/1:1,3:4:6.02:250,6,0
chr10	83059908	.	TCCTTCCTTCTTC	T	596.71	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=-0.288;DP=627;FS=8.231;HRun=0;HaplotypeScore=312.6052;InbreedingCoeff=-0.0211;MQ=49.11;MQ0=7;MQRankSum=-3.506;QD=2.93;ReadPosRankSum=-6.697;VQSLOD=-0.2911;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:2.44:0,2,4603	0/1:10,0:10:29.14:29,0,184	0/0:13,0:6:18.04:0,18,374	0/0:16,0:10:24.08:0,24,459	0/0:14,0:14:4.03:0,4,494	0/1:28,0:27:23.03:23,0,933	0/0:33,0:32:96.33:0,96,4024	0/1:35,0:29:19.01:19,0,1153	0/1:23,0:23:13.13:13,0,1351	0/0:16,0:15:5.51:0,6,477	0/1:17,0:17:0.44:0,0,908	0/0:26,0:26:47.25:0,47,1092	0/0:18,0:18:42.28:0,42,777	0/0:26,0:26:2.93:0,3,1154	0/0:40,0:39:75.07:0,75,1513	0/0:24,0:23:34.23:0,34,880	0/0:30,0:30:44.57:0,45,883	1/1:1,15:16:12.04:408,12,0	0/0:23,0:21:39.49:0,39,1335	0/0:20,0:19:44.65:0,45,1130	0/1:37,0:36:88.27:88,0,755	0/0:11,0:11:25.01:0,25,473	0/1:18,0:18:81.70:82,0,355	0/0:25,0:24:31.70:0,32,465	0/0:25,0:25:18.38:0,18,1291	0/0:19,0:18:40.46:0,40,1479	0/1:20,0:20:74.27:74,0,1557	0/0:4,0:4:9.03:0,9,375
chr10	83059916	.	T	TC	14688.47	PASS	AB=0.865;AC=44;AF=0.786;AN=56;BaseQRankSum=8.288;DP=625;FS=1.767;HRun=1;HaplotypeScore=149.0808;InbreedingCoeff=0.4970;MQ=44.18;MQ0=7;MQRankSum=-3.464;QD=28.41;ReadPosRankSum=2.112;VQSLOD=4.8004;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,1:38:36.68:0,37,1139	1/1:2,8:10:24.06:321,24,0	0/0:12,0:4:7.10:0,7,106	0/0:22,1:8:20.22:0,20,206	1/1:3,10:13:36.06:470,36,0	1/1:11,18:28:59.78:939,60,0	0/0:34,0:33:96.29:0,96,1218	0/1:31,0:25:37.30:188,0,37	1/1:5,19:24:72.22:928,72,0	1/1:3,13:15:39.09:533,39,0	1/1:4,15:19:54.06:670,54,0	1/1:3,24:27:81.16:1062,81,0	1/1:3,14:17:48.16:674,48,0	1/1:8,19:27:75.22:997,75,0	1/1:7,35:41:99:1665,123,0	1/1:4,24:27:81.20:1083,81,0	1/1:7,19:26:78.17:1063,78,0	1/1:16,0:16:0.46:43,0,0	0/1:19,0:17:89.15:89,0,90	1/1:14,0:13:30.20:197,30,0	0/1:14,21:34:99:669,0,273	1/1:4,8:12:30.08:391,30,0	1/1:9,11:20:57.05:723,57,0	1/1:9,16:23:53.61:668,54,0	1/1:4,22:26:78.25:1041,78,0	0/1:16,4:19:99:127,0,228	1/1:18,0:18:17.19:131,17,0	1/1:3,0:3:4.99:18,5,0
chr10	83059923	.	TC	T	5501.53	PASS	AB=0.776;AC=17;AF=0.304;AN=56;BaseQRankSum=3.087;DP=664;FS=2.198;HRun=2;HaplotypeScore=182.6487;InbreedingCoeff=-0.4803;MQ=44.15;MQ0=11;MQRankSum=-4.348;QD=13.93;ReadPosRankSum=2.219;VQSLOD=4.7005;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:96.66:0,97,1413	0/1:7,3:10:62.12:62,0,121	0/0:17,0:4:8.24:0,8,96	0/0:32,0:9:1.35:0,1,213	0/1:10,3:13:99:202,0,169	0/1:15,11:25:99:442,0,229	0/0:37,0:36:99:0,105,1537	0/0:34,0:29:16.83:0,17,429	0/1:11,14:25:99:545,0,134	0/1:12,4:15:99:161,0,157	0/1:9,11:20:92.50:415,0,93	0/1:18,12:30:99:484,0,221	0/1:15,4:19:99:257,0,245	0/1:22,7:29:99:475,0,244	0/1:28,10:37:99:457,0,378	0/1:20,10:29:99:453,0,273	0/1:25,5:30:99:411,0,429	0/0:17,0:17:0.79:0,1,25	0/0:23,0:20:37.28:0,37,513	0/0:12,0:11:25.22:0,25,279	0/0:37,0:36:74.61:0,75,992	0/1:10,4:13:98.78:202,0,99	0/1:13,6:19:99:322,0,125	0/1:23,2:23:99:184,0,200	0/1:14,12:26:99:418,0,222	0/1:23,2:24:12.21:12,0,678	0/0:20,0:20:49.09:0,49,563	0/0:2,0:2:6.02:0,6,86
chr10	83059924	.	C	CCTTCCTTCCTT	18397.77	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=5.294;DP=651;FS=0.738;HRun=0;HaplotypeScore=256.6823;InbreedingCoeff=0.8492;MQ=43.95;MQ0=11;MQRankSum=-8.595;QD=45.31;ReadPosRankSum=3.007;VQSLOD=3.8545;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:43.68:0,44,2585	1/1:10,0:10:17.80:344,18,0	0/0:16,0:3:5.89:0,6,59	0/0:31,0:9:14.45:0,14,263	1/1:12,0:13:36.08:660,36,0	1/1:27,0:26:48.51:1217,49,0	0/0:36,0:35:90.29:0,90,2510	0/0:30,0:25:39.73:0,40,466	1/1:25,0:25:66.66:1044,67,0	1/1:14,1:14:33.11:868,33,0	1/1:19,2:21:57.16:1112,57,0	1/1:30,0:31:60.12:1773,60,0	1/1:17,1:18:39.11:708,39,0	1/1:25,4:29:65.22:1567,65,0	1/1:32,5:37:95.34:2696,95,0	1/1:30,0:29:75.13:1666,75,0	1/1:29,0:29:8.93:1381,9,0	0/0:17,0:17:12.10:0,12,185	0/0:22,0:19:29.04:0,29,745	0/0:12,0:11:24.08:0,24,568	0/1:36,0:35:66.17:66,0,900	1/1:12,1:12:30.06:569,30,0	1/1:19,0:19:24.81:748,25,0	1/1:24,0:22:18.78:635,19,0	1/1:26,0:26:38.74:1342,39,0	0/0:24,0:24:5.54:0,6,737	0/0:19,0:19:46.55:0,47,1070	1/1:2,0:2:0.44:1,0,0
chr10	83059935	.	TC	T	1098.41	PASS	AB=0.838;AC=14;AF=0.250;AN=56;BaseQRankSum=8.939;DP=654;FS=5.429;HRun=3;HaplotypeScore=187.1542;InbreedingCoeff=-0.3666;MQ=45.12;MQ0=7;MQRankSum=-7.898;QD=3.34;ReadPosRankSum=-2.300;VQSLOD=-0.7315;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:62.88:0,63,1382	0/1:5,3:8:46.02:78,0,46	0/0:18,0:5:9.91:0,10,118	0/0:38,0:8:21:0,21,266	0/1:12,3:16:71.11:71,0,298	0/1:24,4:28:99:133,0,501	0/0:35,0:34:99:0,99,1418	0/0:27,0:23:46.89:0,47,529	0/0:25,2:27:1.05:0,1,781	0/1:14,3:16:94.45:94,0,324	0/1:20,3:23:40.03:40,0,555	0/1:23,10:33:99:226,0,672	0/1:15,2:17:52.47:52,0,379	0/0:23,1:24:7.69:0,8,597	0/1:37,5:42:99:219,0,750	0/1:20,9:29:99:127,0,608	0/0:26,2:28:36.45:0,36,662	0/0:18,0:18:5.40:0,5,75	0/0:14,0:13:34.36:0,34,474	0/0:10,0:10:25.60:0,26,305	0/1:28,4:31:73.38:73,0,519	0/1:11,2:12:41.93:42,0,267	0/1:18,2:20:31.41:31,0,387	0/1:15,7:20:30.38:30,0,325	0/1:24,5:29:34.22:34,0,607	0/0:24,0:24:66.17:0,66,916	0/0:19,0:19:53.15:0,53,618	0/0:3,0:3:9.03:0,9,128
chr10	83060001	.	CTTCT	C	7791.24	PASS	AB=0.850;AC=37;AF=0.685;AN=54;BaseQRankSum=4.620;DP=669;FS=0.000;HRun=0;HaplotypeScore=145.6025;InbreedingCoeff=0.8466;MQ=57.78;MQ0=4;MQRankSum=-0.540;QD=16.72;ReadPosRankSum=4.016;VQSLOD=4.4953;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,6:34:99:141,0,670	1/1:1,3:4:6.02:93,6,0	./.	0/0:18,0:13:0:0,0,0	1/1:8,11:19:27.09:418,27,0	1/1:14,10:24:15.05:232,15,0	0/0:27,0:27:45.15:0,45,1043	0/0:27,0:25:20.99:0,21,257	1/1:13,9:22:27.09:418,27,0	1/1:11,16:27:48.15:722,48,0	1/1:13,4:17:18.06:279,18,0	1/1:14,14:28:39.13:600,39,0	1/1:10,0:22:24.03:223,24,0	1/1:12,0:18:21.02:195,21,0	1/1:20,17:36:45.15:697,45,0	1/1:15,14:30:35.63:538,36,0	1/1:18,11:29:21.07:325,21,0	0/0:23,0:23:30.06:0,30,611	0/0:18,0:23:26.87:0,27,388	0/0:9,0:15:20.96:0,21,257	0/0:24,0:24:27.05:0,27,583	1/1:8,15:22:30.10:464,30,0	1/1:14,16:30:28.92:463,29,0	1/1:8,19:27:27.09:418,27,0	1/1:12,6:25:39.01:477,39,0	1/1:18,21:40:66.19:947,66,0	0/0:12,0:28:27.25:0,27,500	1/1:4,4:7:9.03:139,9,0
chr10	83060844	.	TC	T	8743.49	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.505;DP=729;FS=23.351;HRun=1;HaplotypeScore=76.7347;InbreedingCoeff=0.9934;MQ=88.36;MQ0=0;MQRankSum=-8.701;QD=38.35;ReadPosRankSum=0.512;VQSLOD=2.8921;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1769	0/0:6,0:6:18.06:0,18,288	0/0:27,0:27:78.20:0,78,1177	0/0:25,0:25:75.17:0,75,1110	0/0:14,0:14:38.82:0,39,622	0/0:17,0:17:51.17:0,51,815	0/0:42,0:42:99:0,126,1965	1/1:1,31:32:90.29:1241,90,0	0/0:20,0:20:60.20:0,60,957	0/0:25,0:25:75.26:0,75,1199	0/0:12,0:12:36.12:0,36,568	0/0:35,0:35:99:0,102,1628	0/0:30,0:30:87.30:0,87,1382	0/0:38,0:38:99:0,108,1675	0/0:29,0:29:87.30:0,87,1388	0/0:27,0:27:81.28:0,81,1291	0/0:34,0:34:99:0,99,1551	1/1:0,24:24:63.21:881,63,0	1/1:0,17:17:51.17:713,51,0	1/1:0,17:17:42.14:587,42,0	1/1:0,68:68:99:2727,196,0	0/0:18,0:18:54.17:0,54,839	0/0:14,0:14:42.14:0,42,667	0/0:31,0:31:90.31:0,90,1427	0/0:18,0:18:54.18:0,54,863	1/1:1,38:39:65.57:1503,66,0	1/1:0,25:25:66.22:923,66,0	1/1:0,6:6:12.04:168,12,0
chr10	83061127	.	TAAA	T	2483.36	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=5.061;DP=523;FS=7.846;HRun=15;HaplotypeScore=85.4350;InbreedingCoeff=0.9630;MQ=74.07;MQ0=8;MQRankSum=-1.149;QD=20.19;ReadPosRankSum=2.832;VQSLOD=2.6676;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:23:57.12:0,57,865	0/0:11,0:11:24.07:0,24,387	0/0:42,0:22:9.82:0,10,280	0/0:35,0:18:20.35:0,20,166	0/0:15,0:16:27.07:0,27,423	0/0:12,0:16:33.08:0,33,505	0/0:10,0:12:33.09:0,33,535	1/1:11,17:28:47.89:537,48,0	0/0:12,0:12:36.11:0,36,616	0/0:26,0:28:59.92:0,60,899	0/0:16,0:18:45.11:0,45,709	0/0:12,0:14:32.66:0,33,441	0/0:9,0:10:24.06:0,24,406	0/0:16,0:17:43.35:0,43,672	0/0:12,0:12:30.10:0,30,538	0/0:10,0:11:26.45:0,26,437	0/0:26,0:27:66.20:0,66,1137	1/1:4,22:26:63.11:707,63,0	1/1:5,12:19:31.27:341,31,0	1/1:3,14:17:35.94:404,36,0	0/0:4,0:15:12.46:0,12,28	0/0:8,0:10:21.07:0,21,344	0/0:18,0:18:48.14:0,48,783	0/0:19,0:25:48.14:0,48,783	0/0:24,0:25:63.20:0,63,1029	1/1:4,9:14:26.85:287,27,0	1/1:2,11:14:29.03:335,29,0	1/1:3,2:5:5.91:67,6,0
chr10	83063870	.	GCC	G	3184.67	PASS	AB=0.659;AC=33;AF=0.611;AN=54;BaseQRankSum=-4.384;DP=300;FS=4.763;HRun=11;HaplotypeScore=45.0563;InbreedingCoeff=0.6797;MQ=70.32;MQ0=2;MQRankSum=0.561;QD=15.24;ReadPosRankSum=4.133;VQSLOD=1.4082;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:24:30.03:0,30,191	1/1:2,7:9:15.01:158,15,0	0/0:4,0:4:2.37:0,2,8	0/0:11,0:11:8.11:0,8,151	1/1:3,6:9:12.01:127,12,0	1/1:1,9:10:15.03:160,15,0	0/1:14,2:29:9.34:9,0,188	0/0:7,0:10:2.96:0,3,23	1/1:4,8:13:26.78:267,27,0	1/1:3,7:10:21.01:216,21,0	1/1:2,2:4:3:32,3,0	1/1:1,13:13:29.35:317,29,0	1/1:1,6:7:12.02:128,12,0	1/1:3,6:10:5.97:119,6,0	1/1:3,12:14:27.05:287,27,0	1/1:6,7:13:12:128,12,0	1/1:2,15:17:36.08:383,36,0	0/0:13,0:14:32.97:0,33,340	0/0:3,0:3:5.98:0,6,48	0/0:2,0:2:2.97:0,3,20	./.	1/1:1,2:3:6.01:64,6,0	1/1:2,6:8:18.04:191,18,0	1/1:4,17:22:32.86:464,33,0	1/1:4,12:16:30.06:319,30,0	0/0:8,0:7:3:0,3,27	0/0:7,0:9:9.20:0,9,78	0/0:4,0:4:2.98:0,3,21
chr10	83065349	.	TGA	T	78.31	PASS	AB=0.955;AC=14;AF=0.269;AN=52;BaseQRankSum=3.094;DP=565;FS=22.691;HRun=0;HaplotypeScore=69.3686;InbreedingCoeff=0.1208;MQ=76.31;MQ0=19;MQRankSum=0.598;QD=0.28;ReadPosRankSum=0.521;VQSLOD=-0.6341;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:6.48:0,6,69	./.	0/1:49,0:27:0:0,0,0	0/1:66,0:28:0:0,0,0	0/1:13,0:13:0:0,0,0	0/0:14,0:14:3.31:0,3,14	1/1:20,6:26:3.01:32,3,0	0/0:22,0:22:0:0,0,0	0/1:21,0:21:16.45:16,0,94	0/0:19,0:19:9.03:0,9,109	0/1:17,0:17:2.91:3,0,42	0/0:14,0:14:14.99:0,15,142	0/0:12,0:12:11.17:0,11,74	0/1:12,0:13:2.11:2,0,115	0/1:14,4:18:37.16:52,0,37	1/1:13,0:18:2.84:14,3,0	0/0:23,0:23:18.02:0,18,234	./.	0/0:13,0:13:8.78:0,9,71	0/0:12,0:12:8.98:0,9,73	0/0:34,0:34:18.91:0,19,149	0/1:11,2:12:33.98:55,0,34	0/1:10,0:10:3.01:3,0,38	0/0:29,0:29:34.14:0,34,382	0/0:18,0:19:3:0,3,25	0/0:17,0:15:0:0,0,0	0/1:13,1:13:18.10:18,0,106	0/0:4,0:4:0.89:0,1,2
chr10	83066500	.	AGTGTGT	A	7936.72	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=8.800;DP=791;FS=9.259;HRun=0;HaplotypeScore=220.3562;InbreedingCoeff=0.9299;MQ=58.49;MQ0=11;MQRankSum=-9.935;QD=21.28;ReadPosRankSum=2.622;VQSLOD=3.5322;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:81.73:0,82,2428	1/1:0,7:8:9.80:194,10,0	0/0:41,0:17:15.01:0,15,317	0/0:41,0:21:4.98:0,5,356	1/1:8,12:22:17.94:312,18,0	1/1:11,9:20:35.95:555,36,0	0/0:28,0:31:41.86:0,42,1025	0/0:41,0:40:69.12:0,69,1222	1/1:14,19:33:56.35:1267,56,0	1/1:9,13:22:45.15:937,45,0	1/1:5,11:16:5.95:53,6,0	1/1:5,31:37:36.12:714,36,0	1/1:8,11:20:16.09:557,16,0	1/1:5,18:24:39.13:792,39,0	1/1:17,16:33:30.54:510,31,0	1/1:13,17:31:33.15:981,33,0	1/1:16,4:19:10.76:216,11,0	0/0:24,0:24:52.91:0,53,1471	0/0:21,0:22:23.50:0,23,377	0/0:13,0:13:24.06:0,24,651	0/0:88,0:91:99:0,216,6035	1/1:7,15:23:14.79:196,15,0	1/1:4,17:21:6.02:116,6,0	1/1:14,6:20:15.48:201,15,0	1/1:6,14:23:20.87:338,21,0	0/0:27,0:32:75.22:0,75,1933	0/0:16,0:16:45.07:0,45,1096	0/0:20,0:20:36.34:0,36,1417
chr10	83066563	.	C	CTG	1316.38	PASS	AB=0.597;AC=3;AF=0.054;AN=56;BaseQRankSum=-2.484;DP=856;FS=4.262;HRun=0;HaplotypeScore=234.3049;InbreedingCoeff=0.5495;MQ=56.83;MQ0=5;MQRankSum=2.373;QD=24.38;ReadPosRankSum=-1.181;VQSLOD=3.6368;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,111,1269	0/0:8,0:8:11.95:0,12,136	0/0:30,0:16:6.89:0,7,150	0/0:47,0:24:26.49:0,26,279	0/0:34,0:34:48.05:0,48,497	0/0:19,0:19:38.98:0,39,377	0/0:24,0:24:60.15:0,60,698	0/0:29,0:27:48.07:0,48,524	0/0:27,0:28:37.41:0,37,444	0/0:42,0:43:71.06:0,71,902	0/0:19,0:19:33.07:0,33,353	0/0:40,1:41:30.05:0,30,424	0/0:26,0:26:47.90:0,48,490	0/0:31,0:31:42.95:0,43,467	0/0:37,0:37:31.86:0,32,576	0/0:37,0:37:53.49:0,53,643	0/0:23,0:23:20.55:0,21,180	0/0:13,0:14:29.91:0,30,327	0/0:22,0:22:45.13:0,45,542	0/0:13,0:13:30.08:0,30,350	0/0:98,1:99:98.98:0,99,2081	0/0:29,0:29:8.18:0,8,305	0/0:19,0:19:27.06:0,27,289	0/0:31,0:30:51.09:0,51,536	0/0:22,0:24:41.99:0,42,447	0/1:14,29:43:60.52:1246,0,61	0/0:19,0:19:45.11:0,45,518	1/1:9,2:11:14.22:171,14,0
chr10	83066582	.	C	CCTCT	16213.38	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-5.744;DP=869;FS=21.809;HRun=0;HaplotypeScore=206.7428;InbreedingCoeff=0.9785;MQ=59.15;MQ0=8;MQRankSum=2.684;QD=34.28;ReadPosRankSum=7.065;VQSLOD=3.4185;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,117,1845	1/1:7,2:9:9.49:189,9,0	0/0:42,0:25:9.62:0,10,413	0/0:49,0:24:27.05:0,27,399	1/1:7,22:31:38.73:909,39,0	1/1:4,13:20:35.91:805,36,0	0/0:24,0:25:63.17:0,63,976	0/0:29,0:27:54.16:0,54,838	1/1:8,20:32:52.04:1048,52,0	1/1:15,25:41:74.93:1786,75,0	1/1:5,14:19:30.04:747,30,0	1/1:23,15:40:53.84:1296,54,0	1/1:8,18:28:30.34:1004,30,0	1/1:7,21:33:44.62:993,45,0	1/1:12,27:42:77.96:1793,78,0	1/1:10,29:42:59.78:1354,60,0	1/1:7,19:27:35.27:732,35,0	0/0:12,0:12:21.07:0,21,354	0/0:25,0:24:51.15:0,51,818	0/0:11,0:11:24:0,24,405	0/0:85,0:86:99:0,174,2681	1/1:6,20:28:39.59:903,40,0	1/1:8,8:17:29.68:598,30,0	1/1:5,31:37:54.12:1312,54,0	1/1:11,14:26:29.39:745,29,0	0/0:38,1:40:11.84:0,12,1356	0/0:19,0:19:51.13:0,51,830	0/0:8,0:8:18.06:0,18,271
chr10	83066634	.	CTG	C	570.24	PASS	AB=0.935;AC=14;AF=0.269;AN=52;BaseQRankSum=1.297;DP=853;FS=6.463;HRun=0;HaplotypeScore=211.8908;InbreedingCoeff=-0.0551;MQ=57.33;MQ0=11;MQRankSum=1.413;QD=1.47;ReadPosRankSum=-0.359;VQSLOD=2.0466;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,4:48:18.14:0,18,613	0/1:9,2:11:5.88:6,0,228	./.	./.	0/0:31,0:31:39.06:0,39,415	0/1:15,2:17:38.86:39,0,201	0/1:33,5:37:50.70:51,0,510	0/0:22,0:21:18.04:0,18,201	0/1:32,1:33:9.12:9,0,209	0/1:31,1:32:6.16:6,0,306	0/0:23,0:23:21.06:0,21,251	0/0:41,0:41:39.12:0,39,494	0/1:28,2:30:41.80:42,0,179	0/1:29,1:30:2.86:3,0,318	0/0:40,0:41:21.63:0,22,352	0/0:30,0:31:3.94:0,4,162	0/1:23,1:24:2.97:3,0,278	0/0:17,0:15:19.85:0,20,261	0/0:23,0:23:15.05:0,15,182	0/1:15,0:15:0:0,0,0	1/1:50,14:64:17.71:462,18,0	0/0:24,0:25:20.89:0,21,232	0/1:15,2:17:65.60:66,0,197	0/1:46,2:47:2.95:3,0,555	0/1:28,1:29:20.61:21,0,406	0/0:34,0:33:37.05:0,37,294	0/0:24,0:24:21.91:0,22,217	0/0:22,0:22:47.86:0,48,388
chr10	83066638	.	G	GTA	6381.77	PASS	AB=0.997;AC=28;AF=0.500;AN=56;BaseQRankSum=-0.914;DP=870;FS=26.888;HRun=0;HaplotypeScore=197.0437;InbreedingCoeff=-0.3955;MQ=55.13;MQ0=14;MQRankSum=4.643;QD=9.12;ReadPosRankSum=2.719;VQSLOD=2.7843;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,111,1124	0/1:11,0:11:32.44:49,0,32	0/0:41,0:14:41.83:0,42,375	0/0:42,0:18:37.14:0,37,413	0/1:30,1:31:44.33:213,0,44	0/1:17,0:17:41.25:61,0,41	0/0:39,0:38:92.95:0,93,985	0/1:22,0:21:41.49:314,0,41	0/1:31,0:31:39.56:282,0,40	0/1:33,0:32:24.91:367,0,25	0/1:25,0:25:81.47:132,0,81	0/1:41,0:41:99:286,0,142	0/1:27,0:27:50.03:139,0,50	0/1:29,0:29:97.44:122,0,97	0/1:40,1:40:34.34:379,0,34	0/1:30,0:30:32.40:171,0,32	0/1:26,0:26:39.96:40,0,84	0/1:18,0:16:49.57:134,0,50	0/1:23,0:23:29.73:295,0,30	1/1:16,0:15:14.70:114,15,0	1/1:65,0:65:33.50:787,34,0	0/1:27,0:27:34.60:190,0,35	0/1:19,0:19:25.44:25,0,119	0/1:53,0:52:99:142,0,141	0/1:29,0:29:89.89:134,0,90	1/1:29,8:36:42.40:997,42,0	0/1:24,0:24:0.06:335,0,0	1/1:16,9:24:23.93:673,24,0
chr10	83066672	.	G	GTA	1659.67	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.707;DP=783;FS=7.533;HRun=0;HaplotypeScore=163.6881;InbreedingCoeff=0.9955;MQ=58.90;MQ0=9;MQRankSum=0.961;QD=31.31;ReadPosRankSum=0.402;VQSLOD=4.9427;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:89.24:0,89,954	0/0:12,0:12:32.65:0,33,403	0/0:28,0:18:50.82:0,51,475	0/0:32,0:18:50.70:0,51,431	0/0:29,0:29:59.43:0,59,686	0/0:18,0:18:44.70:0,45,507	0/0:41,0:40:89.52:0,90,968	0/0:18,0:17:50.80:0,51,420	0/0:26,0:26:41.65:0,42,419	0/0:39,0:38:92.73:0,93,861	0/0:17,0:17:44.22:0,44,491	0/0:35,0:35:58.85:0,59,709	0/0:28,0:28:41.65:0,42,385	0/0:20,0:20:35.84:0,36,468	0/0:28,0:27:44.74:0,45,564	0/0:27,0:27:53.92:0,54,539	0/0:36,0:36:84.14:0,84,819	0/0:24,0:22:50.59:0,51,365	0/0:15,0:15:38.84:0,39,314	0/0:17,0:16:19.74:0,20,142	0/0:53,0:53:99:0,127,1024	0/0:27,0:27:59.88:0,60,601	0/0:19,0:19:38.25:0,38,430	0/0:53,0:52:99:0,111,1261	0/0:25,0:25:62.32:0,62,721	1/1:28,1:29:23.47:881,23,0	0/0:17,0:17:32.99:0,33,235	1/1:20,4:23:47.57:899,48,0
chr10	83069136	.	A	AG	21059.62	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-13.142;DP=700;FS=5.142;HRun=3;HaplotypeScore=68.5842;InbreedingCoeff=0.9999;MQ=72.22;MQ0=0;MQRankSum=-5.216;QD=36.69;ReadPosRankSum=4.043;VQSLOD=5.4787;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,1584	1/1:1,13:14:36.12:504,36,0	0/0:31,0:32:90.25:0,90,1042	0/0:22,0:22:56.14:0,56,617	1/1:0,23:23:60.16:818,60,0	1/1:1,26:27:75.25:1050,75,0	0/0:26,0:26:75.23:0,75,899	1/1:3,21:24:57.16:762,57,0	1/1:3,18:21:51.17:714,51,0	1/1:4,22:26:66.22:923,66,0	1/1:0,21:21:48.15:655,48,0	1/1:1,17:18:51.17:711,51,0	1/1:4,28:32:81.27:1129,81,0	1/1:2,24:26:75.25:1048,75,0	1/1:0,29:28:84.28:1176,84,0	1/1:0,25:25:72.24:1008,72,0	1/1:1,27:28:75.25:1050,75,0	1/1:0,20:20:57.19:798,57,0	1/1:1,19:20:51.15:681,51,0	1/1:1,27:28:75.25:1049,75,0	1/1:0,31:31:84.28:1176,84,0	1/1:2,19:20:51.17:710,51,0	1/1:1,33:34:87.29:1217,87,0	1/1:0,16:16:39.13:546,39,0	1/1:2,15:17:36.12:504,36,0	1/1:1,28:29:87.26:1191,87,0	1/1:1,28:29:78.26:1092,78,0	1/1:1,14:15:39.13:546,39,0
chr10	83069245	.	C	CACA	21781.57	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-17.288;DP=740;FS=6.815;HRun=0;HaplotypeScore=98.3054;InbreedingCoeff=0.9952;MQ=75.11;MQ0=0;MQRankSum=-2.485;QD=55.57;ReadPosRankSum=4.790;VQSLOD=6.8230;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,2302	1/1:2,4:6:12.04:272,12,0	0/0:17,0:17:36.15:0,36,705	0/0:21,0:21:57.09:0,57,822	1/1:0,24:26:72.16:1534,72,0	1/1:2,20:22:57.20:1291,57,0	0/0:34,0:34:96.33:0,96,1581	0/0:28,0:28:75.24:0,75,1196	1/1:1,23:25:66.23:1494,66,0	1/1:5,23:30:75.26:1686,75,0	1/1:3,11:14:27.09:612,27,0	1/1:2,35:37:96.33:2173,96,0	1/1:1,20:21:54.19:1223,54,0	1/1:1,29:30:81.28:1830,81,0	1/1:4,25:31:69.19:1515,69,0	1/1:2,27:29:75.26:1699,75,0	1/1:2,26:30:78.27:1767,78,0	0/0:28,0:28:81.23:0,81,1313	0/0:23,0:23:23.09:0,23,857	0/0:42,0:42:99:0,117,1931	0/0:42,0:42:99:0,117,1924	1/1:2,25:28:63.22:1426,63,0	1/1:3,19:23:48.16:1087,48,0	1/1:0,20:21:45.15:1019,45,0	1/1:2,17:19:51.18:1154,51,0	0/0:20,0:20:60.19:0,60,973	0/0:28,0:28:72.22:0,72,1171	0/0:17,0:17:51.17:0,51,850
chr10	83069571	.	CGTGTGTGT	C	6042.38	PASS	AB=0.825;AC=38;AF=0.731;AN=52;BaseQRankSum=5.021;DP=634;FS=8.686;HRun=0;HaplotypeScore=200.2001;InbreedingCoeff=0.2431;MQ=58.87;MQ0=15;MQRankSum=-4.181;QD=12.69;ReadPosRankSum=1.208;VQSLOD=2.9902;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:42:50.90:0,51,1626	1/1:6,2:8:9.03:202,9,0	0/0:29,0:20:0.47:0,0,1	./.	1/1:20,3:24:6.47:99,6,0	1/1:13,2:17:8.02:226,8,0	0/0:28,0:28:33.11:0,33,1190	0/0:26,0:25:1.25:0,1,3	1/1:18,2:19:12.04:235,12,0	0/1:23,4:29:98.92:463,0,99	1/1:17,3:24:11.97:130,12,0	1/1:17,6:23:24.07:357,24,0	1/1:15,4:20:24.06:506,24,0	1/1:14,3:17:12.03:178,12,0	0/1:22,7:30:58.24:407,0,58	1/1:10,11:21:27.68:600,28,0	1/1:14,4:16:6.02:120,6,0	0/1:13,0:15:22.66:23,0,50	0/1:20,0:19:49.44:71,0,49	0/1:21,2:32:5.10:125,0,5	./.	1/1:23,12:37:27.02:481,27,0	1/1:12,2:18:11.17:171,11,0	1/1:14,4:19:13.44:217,13,0	1/1:9,5:14:15.05:220,15,0	1/1:16,0:22:27.09:505,27,0	0/1:12,0:18:23.32:129,0,23	1/1:17,0:23:30.10:576,30,0
chr10	83069606	.	GTGTGTGTGTGAA	G	3467.18	PASS	AB=0.989;AC=27;AF=0.519;AN=52;BaseQRankSum=4.854;DP=610;FS=74.189;HRun=0;HaplotypeScore=268.5276;InbreedingCoeff=0.0883;MQ=40.18;MQ0=31;MQRankSum=-6.117;QD=8.67;ReadPosRankSum=4.879;VQSLOD=-0.3690;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:90.01:0,90,2525	1/1:9,0:8:8.95:134,9,0	./.	./.	0/1:22,0:21:36.01:69,0,36	0/1:22,1:22:22.80:184,0,23	0/0:23,0:23:57.88:0,58,1750	0/0:19,0:16:42.13:0,42,664	0/1:25,0:23:39.29:100,0,39	0/1:26,0:22:99:287,0,321	1/1:17,1:18:7.60:63,8,0	1/1:18,0:17:7.75:146,8,0	1/1:17,0:17:1.85:257,2,0	0/1:14,0:14:13.56:31,0,14	0/1:34,0:32:99:169,0,137	0/1:28,0:27:30.05:360,0,30	0/1:23,0:20:39.54:78,0,40	0/0:12,0:12:29.97:0,30,492	0/1:12,0:11:20.19:20,0,306	0/0:44,0:41:32.68:0,33,441	0/0:21,0:18:22.50:0,23,223	1/1:33,1:33:5.92:163,6,0	0/1:22,1:21:2.81:72,0,3	1/1:24,0:24:13.37:118,13,0	1/1:12,0:12:6.55:71,7,0	0/1:26,1:23:99:581,0,105	0/0:24,0:24:17.52:0,18,494	1/1:10,1:11:30.10:564,30,0
chr10	83069622	.	GAGAGAGAGAGAC	G	948.66	PASS	AB=1.000;AC=5;AF=0.100;AN=50;BaseQRankSum=6.125;DP=644;FS=4.690;HRun=0;HaplotypeScore=287.7260;InbreedingCoeff=0.4654;MQ=41.34;MQ0=34;MQRankSum=-2.719;QD=12.48;ReadPosRankSum=-0.970;VQSLOD=2.0339;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:63.02:0,63,2244	0/0:11,0:10:9.97:0,10,146	./.	./.	0/0:22,0:21:10.77:0,11,274	0/0:21,0:20:3.83:0,4,20	0/0:21,0:21:42.01:0,42,1581	0/0:27,0:24:56.96:0,57,1020	0/0:25,0:23:14.83:0,15,233	0/0:32,0:27:66.88:0,67,871	0/0:18,0:18:5.39:0,5,126	0/0:21,0:20:11.92:0,12,211	0/0:16,0:16:17.46:0,17,134	0/0:14,0:14:3.01:0,3,71	0/0:35,0:34:19.24:0,19,345	0/1:31,0:30:12.24:12,0,221	0/0:21,0:18:14.65:0,15,194	0/0:13,0:13:30.05:0,30,1319	0/0:13,0:12:29.85:0,30,519	0/0:43,0:39:40.20:0,40,1072	0/0:28,0:26:34.99:0,35,1639	0/0:33,0:33:9.60:0,10,270	0/0:26,0:24:3.01:0,3,73	./.	0/0:16,0:16:5.91:0,6,72	1/1:12,22:30:39.02:795,39,0	0/0:20,0:20:38.83:0,39,942	1/1:10,1:11:4.35:255,4,0
chr10	83069630	.	GAGAC	G	2597.29	PASS	AB=0.793;AC=30;AF=0.577;AN=52;BaseQRankSum=5.623;DP=656;FS=0.000;HRun=0;HaplotypeScore=234.3971;InbreedingCoeff=0.6085;MQ=43.00;MQ0=32;MQRankSum=-1.468;QD=6.53;ReadPosRankSum=-1.011;VQSLOD=2.1881;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:10.99:0,11,992	1/1:0,10:9:11.98:121,12,0	./.	./.	1/1:4,19:23:12.57:170,13,0	1/1:5,16:20:3.76:17,4,0	0/0:20,0:20:44.95:0,45,877	0/0:26,0:25:66.02:0,66,944	1/1:5,20:24:11.40:158,11,0	1/1:13,18:25:24.37:682,24,0	1/1:7,11:18:6.36:74,6,0	0/1:8,12:19:3.62:121,0,4	1/1:6,12:18:14.97:168,15,0	0/1:3,15:18:0:0,0,0	1/1:3,35:37:17.90:242,18,0	1/1:5,29:33:27.85:408,28,0	1/1:6,16:19:8.27:153,8,0	0/0:14,0:14:30.10:0,30,743	0/0:16,0:14:32.72:0,33,344	0/0:42,0:38:28.30:0,28,538	0/0:30,0:29:41.31:0,41,923	1/1:13,20:33:12.33:167,12,0	1/1:6,21:26:2.92:37,3,0	0/0:7,20:27:2.89:0,3,24	1/1:3,13:15:3.01:38,3,0	0/1:32,0:27:99:194,0,136	0/0:22,0:22:38.92:0,39,583	0/1:12,0:12:34.55:35,0,152
chr10	83069632	.	GAC	G	1079.95	PASS	AB=1.000;AC=33;AF=0.635;AN=52;BaseQRankSum=6.759;DP=650;FS=0.000;HRun=0;HaplotypeScore=225.0533;InbreedingCoeff=0.5547;MQ=43.14;MQ0=32;MQRankSum=-1.677;QD=2.55;ReadPosRankSum=-1.444;VQSLOD=2.2615;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:4.03:4,0,698	1/1:10,0:9:4.38:48,4,0	./.	./.	1/1:23,0:23:12.29:74,12,0	1/1:21,0:20:4.12:18,4,0	0/0:22,0:22:50.94:0,51,734	0/0:27,0:26:68.95:0,69,934	1/1:25,0:24:8.42:57,8,0	1/1:31,0:25:17.60:254,18,0	1/1:18,0:18:6.32:35,6,0	1/1:18,0:17:1.87:47,2,0	1/1:14,2:16:8.94:70,9,0	1/1:17,1:18:3.01:37,3,0	1/1:38,0:37:17.61:110,18,0	1/1:32,1:32:22.97:117,23,0	1/1:22,0:19:14.07:89,14,0	0/0:14,0:14:30.10:0,30,562	0/0:17,0:15:26.07:0,26,301	0/0:42,0:38:28.21:0,28,419	0/0:31,0:30:44.19:0,44,670	1/1:30,1:31:11.70:71,12,0	1/1:27,0:25:2.84:17,3,0	0/0:26,1:27:2.99:0,3,24	1/1:16,0:15:2.94:18,3,0	0/1:30,0:25:99:141,0,151	0/0:22,0:22:38.64:0,39,488	0/1:12,0:12:54.78:55,0,248
chr10	83069672	.	GAC	G	712.47	PASS	AB=0.891;AC=4;AF=0.071;AN=56;BaseQRankSum=7.281;DP=766;FS=0.605;HRun=0;HaplotypeScore=150.1732;InbreedingCoeff=-0.0774;MQ=55.25;MQ0=16;MQRankSum=-3.564;QD=6.54;ReadPosRankSum=-1.362;VQSLOD=3.2817;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:90.31:0,90,1635	0/0:13,0:13:27.09:0,27,499	0/0:32,1:14:32.14:0,32,546	0/0:44,0:22:44.19:0,44,644	0/0:24,0:24:40.71:0,41,708	0/0:26,0:25:36.12:0,36,633	0/0:30,0:30:78.27:0,78,1458	0/1:36,4:37:99:265,0,892	0/0:30,0:29:42.13:0,42,759	0/0:27,0:24:65.35:0,65,1194	0/0:16,0:16:26.39:0,26,504	0/0:25,0:25:39.87:0,40,884	0/0:20,0:20:36.12:0,36,679	0/0:19,0:19:24.03:0,24,393	0/0:35,0:34:54.17:0,54,976	0/0:33,0:32:38.36:0,38,746	0/0:24,0:24:30.10:0,30,516	0/1:10,8:17:99:258,0,293	0/1:24,1:22:99:202,0,423	0/0:28,0:27:22.59:0,23,380	0/0:42,0:42:99:0,102,1911	0/0:31,0:31:60.20:0,60,1141	0/0:25,0:23:29.85:0,30,515	0/0:28,0:28:24.08:0,24,463	0/0:19,0:18:24.08:0,24,432	0/0:31,0:28:75.19:0,75,1272	0/1:26,0:26:96.80:97,0,169	0/0:17,0:17:51.11:0,51,863
chr10	83069674	.	C	CAGACAG	3718.07	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-2.532;DP=779;FS=0.000;HRun=0;HaplotypeScore=183.3982;InbreedingCoeff=0.9540;MQ=55.47;MQ0=14;MQRankSum=-5.466;QD=26.00;ReadPosRankSum=-0.968;VQSLOD=3.0014;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:66.23:0,66,1295	0/0:13,0:13:24.08:0,24,460	0/0:36,0:16:37.59:0,38,591	0/0:48,0:23:31.96:0,32,565	0/0:24,0:24:36.08:0,36,619	0/0:25,0:24:36.09:0,36,655	0/0:29,0:29:57.19:0,57,1152	1/1:29,0:37:54.59:876,55,0	0/0:29,0:28:39.12:0,39,697	0/0:27,0:25:53.30:0,53,1024	0/0:15,0:15:26.69:0,27,521	0/0:27,0:27:46.96:0,47,1012	0/0:19,0:19:36.12:0,36,698	0/0:19,0:19:24.08:0,24,422	0/0:34,0:33:53.76:0,54,1020	0/0:35,0:34:39.01:0,39,665	0/0:25,0:25:33.09:0,33,576	1/1:16,2:17:36.12:834,36,0	1/1:11,16:26:45.12:1015,45,0	1/1:8,20:30:2.78:99,3,0	0/0:43,0:43:96.44:0,96,1815	0/0:32,0:32:61.43:0,61,1219	0/0:26,0:25:32.80:0,33,501	0/0:28,0:28:23.95:0,24,507	0/0:19,0:18:24.08:0,24,441	0/0:30,0:27:66.16:0,66,1230	1/1:4,21:25:27.09:895,27,0	0/0:17,0:17:51.11:0,51,933
chr10	83070515	.	T	TA	1346.48	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.557;DP=696;FS=2.783;HRun=7;HaplotypeScore=65.3042;InbreedingCoeff=0.9994;MQ=75.67;MQ0=0;MQRankSum=0.097;QD=28.05;ReadPosRankSum=2.330;VQSLOD=4.5558;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.12:0,72,695	0/0:13,0:13:30.03:0,30,283	0/0:22,0:22:47.24:0,47,472	0/0:15,0:15:32.50:0,32,287	0/0:30,0:30:84.09:0,84,793	0/0:31,0:31:90.14:0,90,868	0/0:32,0:32:81.09:0,81,770	0/0:38,0:38:89.15:0,89,855	0/0:23,0:23:63.10:0,63,608	0/0:25,0:25:56.96:0,57,532	0/0:34,0:34:87.12:0,87,834	0/0:22,0:22:63.03:0,63,589	0/0:24,0:24:63.08:0,63,603	0/0:19,0:19:48.06:0,48,458	0/0:22,0:22:60.08:0,60,575	0/0:14,0:14:39.06:0,39,377	0/0:11,0:11:33.02:0,33,306	0/0:19,0:19:54.06:0,54,513	0/0:26,0:26:63.05:0,63,593	0/0:32,0:32:84.04:0,84,789	0/0:30,0:30:75.09:0,75,713	0/0:28,0:28:81.07:0,81,766	0/0:32,0:32:90.01:0,90,829	0/0:23,0:23:63.05:0,63,595	0/0:23,0:23:57.06:0,57,542	1/1:3,29:32:61.27:997,61,0	0/0:33,0:33:80.98:0,81,749	1/1:0,16:16:39.12:471,39,0
chr10	83071257	.	AT	A	330.32	PASS	AB=0.909;AC=7;AF=0.125;AN=56;BaseQRankSum=4.564;DP=420;FS=4.923;HRun=7;HaplotypeScore=43.5270;InbreedingCoeff=0.7256;MQ=65.73;MQ0=1;MQRankSum=1.657;QD=11.39;ReadPosRankSum=0.725;VQSLOD=1.3909;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:66.19:0,66,814	0/0:3,0:3:9.03:0,9,113	0/1:9,1:7:4.38:4,0,139	0/0:7,0:7:2.72:0,3,71	0/0:13,0:13:39.12:0,39,487	0/0:12,0:12:33.11:0,33,415	0/0:14,0:14:36.10:0,36,440	0/0:30,0:30:78.23:0,78,951	0/0:15,0:15:33.11:0,33,414	0/0:22,0:22:66.21:0,66,830	0/0:17,0:16:39.11:0,39,475	0/0:13,0:13:39.12:0,39,491	1/1:1,4:5:9.02:92,9,0	1/1:0,10:10:27.06:275,27,0	0/0:10,0:10:24.08:0,24,300	0/0:12,0:12:36.10:0,36,440	0/0:45,0:45:99:0,129,1568	0/0:23,0:23:57.18:0,57,715	0/0:13,0:13:33.11:0,33,415	0/0:20,0:20:57.10:0,57,696	0/0:2,0:2:6.02:0,6,75	1/1:0,4:4:9.02:92,9,0	0/0:9,0:9:24.08:0,24,302	0/0:12,0:12:27.09:0,27,339	0/0:21,0:21:57.16:0,57,689	0/0:29,0:29:78.25:0,78,981	0/0:18,0:18:48.15:0,48,604	0/0:3,0:3:9.03:0,9,113
chr10	83071422	.	AC	A	1481.19	PASS	AB=0.984;AC=33;AF=0.611;AN=54;BaseQRankSum=2.399;DP=408;FS=2.698;HRun=1;HaplotypeScore=52.1277;InbreedingCoeff=-0.2519;MQ=37.89;MQ0=38;MQRankSum=-2.552;QD=4.06;ReadPosRankSum=-1.375;VQSLOD=-0.1154;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:28:9.95:10,0,137	1/1:8,0:4:7.71:44,8,0	0/1:17,3:5:7.81:19,0,8	0/0:5,0:1:1.25:0,1,3	1/1:14,0:11:10.56:80,11,0	./.	0/1:19,0:17:43.87:44,0,117	0/1:19,1:20:63.41:63,0,159	1/1:8,0:8:13.32:83,13,0	1/1:10,6:11:5.71:96,6,0	1/1:15,0:13:13.06:117,13,0	0/1:12,0:10:4.23:56,0,4	0/1:9,0:6:17.39:46,0,17	1/1:10,0:8:13.64:83,14,0	1/1:13,0:6:5.92:48,6,0	0/1:3,0:3:7.90:33,0,8	1/1:37,1:31:35.25:301,35,0	0/0:13,7:16:6.64:0,7,57	0/1:23,0:22:87.80:88,0,186	0/1:14,0:14:51.63:52,0,139	0/1:16,0:13:22.13:22,0,24	0/0:6,0:4:0:0,0,0	1/1:2,0:2:2.97:20,3,0	0/1:25,0:23:17.90:169,0,18	0/1:9,0:8:1.73:82,0,2	0/1:14,1:11:10.31:10,0,53	0/1:12,0:10:21.18:56,0,21	0/1:13,0:5:7.28:7,0,29
chr10	83071692	.	TACACACACACACACACACAC	T	6634.99	PASS	AB=0.867;AC=24;AF=0.480;AN=50;BaseQRankSum=6.563;DP=469;FS=20.130;HRun=0;HaplotypeScore=255.3673;InbreedingCoeff=0.5737;MQ=62.82;MQ0=13;MQRankSum=-5.883;QD=30.72;ReadPosRankSum=1.941;VQSLOD=2.3205;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:14.06:0,14,1089	./.	0/0:32,0:16:3.01:0,3,59	0/0:27,0:21:6.02:0,6,123	1/1:8,4:11:2.98:21,3,0	1/1:9,4:12:12.04:639,12,0	0/0:28,0:33:45.14:0,45,2269	0/0:20,0:20:9.02:0,9,178	1/1:11,12:23:9.50:480,10,0	1/1:17,7:24:18.06:615,18,0	./.	1/1:14,3:17:6.02:299,6,0	0/1:8,1:10:32.67:447,0,33	1/1:12,4:16:9.03:479,9,0	1/1:14,5:20:18.06:938,18,0	1/1:10,9:20:30.10:1576,30,0	1/1:9,3:12:6.02:319,6,0	0/0:15,0:16:1.58:0,2,443	0/0:11,0:11:9.92:0,10,235	0/0:8,0:10:6.02:0,6,171	0/0:16,0:18:21.07:0,21,971	1/1:9,4:13:6.02:281,6,0	./.	0/1:16,1:16:40.20:94,0,40	1/1:11,6:16:9.03:446,9,0	0/0:11,0:12:12.04:0,12,761	0/0:11,0:19:6.12:0,6,410	0/0:3,0:2:3.01:0,3,209
chr10	83072063	.	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCG	T	4522.91	PASS	AB=0.878;AC=22;AF=0.393;AN=56;BaseQRankSum=7.711;DP=633;FS=25.248;HRun=0;HaplotypeScore=144.7977;InbreedingCoeff=0.1806;MQ=31.22;MQ0=278;MQRankSum=-3.367;QD=16.39;ReadPosRankSum=5.269;VQSLOD=1.7534;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:11:27.09:0,27,2471	0/0:4,0:1:0:0,0,0	0/0:30,0:1:3.01:0,3,176	0/0:40,0:10:27.09:0,27,1649	0/0:7,0:1:0:0,0,0	0/1:10,0:3:99:210,0,151	0/0:11,0:5:12.04:0,12,904	0/0:23,0:15:41.97:0,42,828	1/1:10,5:6:2.85:234,3,0	0/1:20,2:5:64.10:64,0,132	1/1:10,6:8:5.62:415,6,0	1/1:11,7:12:3.48:236,3,0	0/1:13,5:13:4.12:459,0,4	1/1:11,6:9:2.54:233,3,0	1/1:10,12:13:15.05:1140,15,0	1/1:3,12:13:1.60:232,2,0	0/1:9,15:17:60.19:492,0,60	0/1:32,0:20:82.54:83,0,531	0/0:93,0:8:24.06:0,24,445	0/0:15,0:10:20.81:0,21,331	0/0:37,0:9:13.81:0,14,435	0/0:8,1:3:0:0,0,0	0/1:7,0:3:99:223,0,225	0/1:7,5:7:99:194,0,104	1/1:16,0:7:2.73:199,3,0	0/0:25,0:10:27.09:0,27,1374	0/1:31,0:23:99:110,0,382	0/0:38,0:16:42.14:0,42,2710
chr10	83072064	.	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCG	T	4232.72	PASS	AB=0.980;AC=23;AF=0.460;AN=50;BaseQRankSum=7.665;DP=609;FS=32.207;HRun=0;HaplotypeScore=131.9308;InbreedingCoeff=0.2174;MQ=28.02;MQ0=281;MQRankSum=-2.745;QD=16.53;ReadPosRankSum=5.340;VQSLOD=1.6172;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:11:27.09:0,27,2425	./.	0/0:30,0:1:3.01:0,3,162	0/0:39,0:9:27.09:0,27,1609	./.	0/1:11,0:3:99:204,0,142	0/0:11,0:5:12.04:0,12,867	0/0:23,0:15:38.75:0,39,626	1/1:14,0:5:3.01:213,3,0	0/1:23,0:5:25.43:25,0,119	1/1:15,0:7:5.80:374,6,0	1/1:13,0:7:4.26:216,4,0	1/1:12,0:7:6.02:427,6,0	1/1:14,0:6:3.01:213,3,0	1/1:22,0:13:15.05:1067,15,0	1/1:14,0:12:1.72:211,2,0	0/1:24,0:17:60.47:451,0,60	0/1:32,0:20:99:100,0,361	0/0:93,0:7:20.97:0,21,316	0/0:15,0:10:20.62:0,21,237	0/0:38,0:9:13.66:0,14,412	./.	0/1:5,1:2:99:203,0,233	0/1:11,0:6:88.86:174,0,89	1/1:12,3:6:2.90:227,3,0	0/0:25,0:10:27.09:0,27,1245	0/1:30,0:22:99:128,0,251	0/0:38,0:16:42.14:0,42,2526
chr10	83072067	.	TTTTTTTTTTTTTTTTTTTTTTTTTTTCG	T	4088.61	PASS	AB=0.959;AC=25;AF=0.500;AN=50;BaseQRankSum=6.752;DP=579;FS=35.998;HRun=0;HaplotypeScore=103.9185;InbreedingCoeff=0.0893;MQ=26.72;MQ0=287;MQRankSum=-0.723;QD=11.58;ReadPosRankSum=4.142;VQSLOD=-0.5279;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:10:24.08:0,24,2124	./.	0/0:22,0:1:3.01:0,3,119	0/0:35,0:9:24.07:0,24,1417	./.	0/1:11,0:3:99:187,0,100	0/0:10,0:4:9.03:0,9,748	0/1:17,0:9:35.51:36,0,127	1/1:14,0:5:3.01:196,3,0	0/1:23,0:5:5.09:5,0,79	1/1:15,0:7:5.90:339,6,0	1/1:13,0:7:4.26:199,4,0	1/1:12,0:7:6.02:392,6,0	1/1:14,0:6:3.01:196,3,0	1/1:22,0:13:15.05:980,15,0	1/1:14,0:12:1.96:194,2,0	0/1:24,0:17:41.59:416,0,42	0/1:27,0:15:4.81:169,0,5	0/1:89,0:3:43.18:43,0,58	0/0:8,0:3:0:0,0,0	0/0:40,0:11:18.56:0,19,474	./.	0/1:7,0:2:99:185,0,241	0/1:12,0:6:46.09:156,0,46	1/1:15,0:5:3.01:196,3,0	0/0:27,0:10:27.07:0,27,854	0/1:10,14:16:13.81:201,0,14	0/0:44,0:17:45.15:0,45,2080
chr10	83072068	.	TTTTTTTTTTTTTTTTTTTTTTTTTTCG	T	3957.09	PASS	AB=0.960;AC=25;AF=0.521;AN=48;BaseQRankSum=7.219;DP=567;FS=31.031;HRun=0;HaplotypeScore=92.7590;InbreedingCoeff=0.2356;MQ=26.01;MQ0=289;MQRankSum=-1.535;QD=11.99;ReadPosRankSum=4.910;VQSLOD=-0.2003;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:10:24.08:0,24,2051	./.	0/0:22,0:1:3.01:0,3,104	0/0:33,0:9:23.82:0,24,1320	./.	0/1:11,0:3:95.22:182,0,95	0/0:10,0:4:9.03:0,9,738	0/0:15,0:7:8.96:0,9,84	1/1:14,0:5:3.01:190,3,0	0/1:23,0:5:0.87:1,0,66	1/1:15,0:7:5.96:328,6,0	1/1:13,0:7:4.26:193,4,0	1/1:12,0:7:6.02:380,6,0	1/1:14,0:6:3.01:190,3,0	1/1:22,0:13:15.05:952,15,0	1/1:14,0:12:1.88:188,2,0	0/1:24,0:17:56.21:405,0,56	0/1:14,8:10:2.51:193,0,3	0/1:87,1:2:42.10:42,0,43	./.	0/0:37,0:8:16.86:0,17,409	./.	0/1:7,0:2:99:180,0,224	0/1:13,0:6:30.34:151,0,30	1/1:15,0:5:3.01:190,3,0	0/0:26,0:9:24.08:0,24,717	1/1:23,0:15:4.04:192,4,0	0/0:46,0:18:45.15:0,45,1862
chr10	83072093	.	TCG	T	2291.12	PASS	AB=0.835;AC=48;AF=0.923;AN=52;BaseQRankSum=0.815;DP=365;FS=0.000;HRun=0;HaplotypeScore=67.9405;InbreedingCoeff=-0.0747;MQ=26.63;MQ0=140;MQRankSum=-2.922;QD=7.01;ReadPosRankSum=0.159;VQSLOD=2.9878;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,4:6:37.11:125,0,37	1/1:0,2:2:6.02:73,6,0	./.	./.	1/1:3,8:6:15.05:178,15,0	1/1:2,9:9:21.04:238,21,0	1/1:4,4:4:4.71:70,5,0	1/1:4,8:6:18.06:219,18,0	1/1:12,0:5:2.98:22,3,0	1/1:8,7:7:12.04:146,12,0	1/1:8,1:7:6.02:70,6,0	1/1:10,0:7:2.98:22,3,0	1/1:10,1:7:8.98:80,9,0	1/1:13,0:7:5.99:57,6,0	1/1:18,0:13:14.91:109,15,0	1/1:12,0:12:2.98:22,3,0	0/1:20,0:16:14.65:68,0,15	1/1:17,1:10:2.99:23,3,0	1/1:4,5:4:6.02:74,6,0	1/1:3,4:4:6.02:65,6,0	1/1:7,3:3:6.02:66,6,0	1/1:3,7:8:15.04:172,15,0	1/1:2,5:6:15.04:175,15,0	0/1:10,1:6:0:0,0,0	1/1:8,0:3:2.98:22,3,0	1/1:5,6:4:9.03:109,9,0	1/1:20,0:14:2.99:23,3,0	0/1:17,17:17:14.75:165,0,15
chr10	83075152	.	C	CG	2051.44	PASS	AB=0.690;AC=42;AF=0.778;AN=54;BaseQRankSum=-0.412;DP=357;FS=2.198;HRun=10;HaplotypeScore=55.8866;InbreedingCoeff=0.2132;MQ=86.24;MQ0=0;MQRankSum=-2.524;QD=7.65;ReadPosRankSum=-0.840;VQSLOD=1.3287;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,11:18:7.97:94,8,0	0/1:1,3:4:18.63:26,0,19	0/0:29,0:25:15.80:0,16,158	0/0:17,0:15:12.07:0,12,77	1/1:2,5:7:3.01:32,3,0	0/1:12,3:15:9.30:82,0,9	0/0:32,0:32:70.82:0,71,566	1/1:6,0:6:6.60:25,7,0	1/1:7,5:12:13:157,13,0	1/1:10,2:12:9:81,9,0	1/1:2,0:2:2.68:12,3,0	0/1:5,12:17:9.59:113,0,10	./.	0/1:6,13:19:22.65:110,0,23	1/1:14,0:14:27.13:234,27,0	0/1:4,16:20:3.57:170,0,4	1/1:17,7:24:23.79:393,24,0	1/1:17,0:17:34.88:145,35,0	1/1:2,0:2:5.36:22,5,0	1/1:3,0:3:7.95:32,8,0	0/1:19,0:19:8.18:29,0,8	1/1:5,5:10:6.02:64,6,0	1/1:6,2:8:1.67:44,2,0	1/1:3,11:14:12.01:119,12,0	1/1:8,0:8:11.87:93,12,0	1/1:10,0:11:7.28:52,7,0	1/1:4,0:5:11.08:52,11,0	1/1:1,0:1:3:27,3,0
chr10	83075158	.	G	GGC	1302.35	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-6.963;DP=372;FS=1.444;HRun=0;HaplotypeScore=62.3391;InbreedingCoeff=0.7744;MQ=87.29;MQ0=0;MQRankSum=0.888;QD=28.31;ReadPosRankSum=1.164;VQSLOD=4.8040;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:22.74:0,23,149	0/0:5,0:5:8.60:0,9,79	0/0:31,0:26:56.35:0,56,572	0/0:19,0:16:29.67:0,30,361	0/0:7,0:7:11.49:0,11,70	0/0:14,0:14:27.61:0,28,215	0/0:31,0:31:84.13:0,84,1147	1/1:0,7:8:23.93:272,24,0	0/0:9,0:9:23.14:0,23,138	0/0:16,0:16:28.09:0,28,231	0/0:1,0:1:2.94:0,3,18	0/0:17,0:17:22.39:0,22,159	0/0:12,0:12:8.98:0,9,72	0/0:20,0:20:25.29:0,25,201	0/0:13,0:13:21.95:0,22,129	0/0:20,0:20:27.46:0,27,176	0/0:26,0:26:59.60:0,60,379	1/1:1,16:17:41.35:679,41,0	1/1:0,4:4:11.98:147,12,0	1/1:1,3:4:9.02:154,9,0	0/0:20,0:20:25.62:0,26,187	0/0:9,0:9:11.15:0,11,66	0/1:7,0:7:7.78:8,0,60	0/0:15,0:15:20.79:0,21,132	0/0:8,0:8:17.38:0,17,110	0/0:14,0:14:23.62:0,24,180	1/1:1,3:6:14.98:209,15,0	0/0:1,0:1:1.25:0,1,3
chr10	83075543	.	C	CG	619.23	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-4.485;DP=583;FS=6.299;HRun=6;HaplotypeScore=59.1245;InbreedingCoeff=0.7471;MQ=75.83;MQ0=0;MQRankSum=0.543;QD=14.40;ReadPosRankSum=-0.550;VQSLOD=2.7710;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,117,1122	0/0:14,0:14:39:0,39,377	0/1:16,0:16:19.07:19,0,143	0/0:9,0:10:15.72:0,16,103	0/0:19,0:19:22.37:0,22,432	0/0:20,0:20:56.92:0,57,548	0/0:35,0:35:96.15:0,96,955	0/0:27,0:27:40.65:0,41,408	0/0:23,0:23:66.14:0,66,668	0/0:20,0:20:41.99:0,42,400	0/0:12,0:12:22.50:0,22,217	0/0:19,0:19:48.10:0,48,484	0/0:23,0:23:60.12:0,60,604	0/0:22,0:22:60.11:0,60,604	0/0:29,0:29:87.17:0,87,873	0/0:17,0:17:42.08:0,42,423	0/0:24,0:24:69.11:0,69,687	0/0:23,0:23:53.98:0,54,513	0/0:19,0:19:45.05:0,45,439	0/0:7,0:7:18.04:0,18,183	0/0:36,0:36:96.18:0,96,968	0/0:16,0:16:39.70:0,40,381	0/0:12,0:12:13.08:0,13,191	0/0:25,0:25:63.04:0,63,621	0/0:20,0:20:46.86:0,47,457	1/1:6,16:22:20.57:573,21,0	0/0:25,0:25:68.19:0,68,679	1/1:0,5:5:12.04:151,12,0
chr10	83076497	.	CA	C	10267.19	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=9.719;DP=616;FS=12.815;HRun=4;HaplotypeScore=89.9147;InbreedingCoeff=0.9979;MQ=82.50;MQ0=0;MQRankSum=-2.006;QD=31.69;ReadPosRankSum=4.306;VQSLOD=4.1966;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,150,2066	1/1:0,8:8:21.06:252,21,0	0/0:18,0:18:50.47:0,50,570	0/0:16,0:16:24.46:0,24,348	1/1:0,12:12:30.09:360,30,0	1/1:0,16:16:48.15:574,48,0	0/0:30,0:30:90.25:0,90,1206	0/0:19,0:19:57.17:0,57,765	1/1:2,18:20:48.15:576,48,0	1/1:2,19:21:57.12:646,57,0	1/1:0,10:10:30.09:358,30,0	1/1:0,17:17:48.15:576,48,0	1/1:0,34:34:90.07:1079,90,0	1/1:1,22:23:60.18:720,60,0	1/1:0,16:16:45.14:540,45,0	1/1:1,25:26:69.21:827,69,0	1/1:1,35:36:90.22:1063,90,0	0/0:34,1:35:66.27:0,66,1288	0/0:22,0:22:66.22:0,66,921	0/0:12,0:12:36.12:0,36,502	0/0:35,0:35:99:0,102,1393	1/1:1,21:22:53.69:646,54,0	1/1:0,12:12:36.11:432,36,0	1/1:2,34:36:93.29:1116,93,0	1/1:0,15:15:42.13:504,42,0	0/0:29,0:29:87.29:0,87,1218	0/0:18,0:18:51.17:0,51,712	0/0:7,0:7:18.06:0,18,252
chr10	83080879	.	AG	A	8176.43	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=5.101;DP=646;FS=7.634;HRun=8;HaplotypeScore=73.2525;InbreedingCoeff=0.9971;MQ=82.95;MQ0=0;MQRankSum=-2.837;QD=24.85;ReadPosRankSum=5.671;VQSLOD=5.1811;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,1511	1/1:0,9:9:27.04:261,27,0	0/0:20,0:20:48.13:0,48,560	0/0:23,2:25:34.08:0,34,654	1/1:3,16:19:42.07:405,42,0	1/1:3,23:26:72.01:682,72,0	0/0:36,0:36:96.28:0,96,1147	0/0:22,0:22:53.96:0,54,552	1/1:4,22:26:60.09:579,60,0	1/1:2,24:26:75.10:718,75,0	1/1:1,15:16:39.06:377,39,0	1/1:2,12:14:36.06:348,36,0	1/1:1,18:19:48.08:464,48,0	1/1:2,16:18:51.08:492,51,0	1/1:0,14:14:39.06:377,39,0	1/1:2,21:23:57.09:550,57,0	1/1:5,26:31:75.12:724,75,0	0/0:27,0:27:75.23:0,75,906	0/0:19,1:20:16.16:0,16,478	0/0:21,0:21:57.16:0,57,677	0/0:4,0:33:74.56:0,75,385	1/1:3,28:31:87.14:839,87,0	1/1:1,10:11:24.04:232,24,0	1/1:2,23:25:60.09:579,60,0	1/1:2,19:21:57.09:550,57,0	0/0:6,1:33:49.38:0,49,369	0/0:22,0:22:57.16:0,57,676	0/0:3,0:12:20.13:0,20,102
chr10	83082403	.	GGC	G	2238.11	PASS	AB=0.756;AC=12;AF=0.300;AN=40;BaseQRankSum=9.200;DP=490;FS=15.774;HRun=0;HaplotypeScore=88.7223;InbreedingCoeff=-0.2431;MQ=29.64;MQ0=145;MQRankSum=-6.060;QD=9.33;ReadPosRankSum=1.367;VQSLOD=2.2615;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:15:11.96:0,12,368	./.	0/1:12,0:2:0.71:1,0,33	./.	./.	0/1:13,5:9:99:116,0,136	0/0:45,2:34:34.79:0,35,1272	./.	0/1:9,11:13:99:335,0,143	0/0:10,4:6:11.95:0,12,233	./.	0/1:17,9:16:78.34:440,0,78	0/1:10,11:15:32.72:276,0,33	0/1:12,8:12:99:174,0,153	0/1:14,9:16:99:168,0,215	0/1:13,13:18:99:373,0,246	0/1:27,7:19:98.04:268,0,98	0/0:33,0:18:29.10:0,29,842	0/0:22,0:2:6.02:0,6,117	0/0:1,0:1:3.01:0,3,58	0/0:51,0:22:42.14:0,42,782	1/1:7,1:3:6.01:74,6,0	./.	0/1:24,8:16:40.36:142,0,40	./.	0/0:16,0:5:12.04:0,12,234	0/0:7,0:5:15.05:0,15,279	./.
chr10	83082415	.	GGC	G	3621.36	PASS	AB=0.734;AC=18;AF=0.375;AN=48;BaseQRankSum=9.027;DP=579;FS=19.554;HRun=0;HaplotypeScore=98.5864;InbreedingCoeff=-0.0337;MQ=34.47;MQ0=132;MQRankSum=-4.969;QD=12.15;ReadPosRankSum=2.458;VQSLOD=1.6037;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:22:22.88:0,23,687	./.	0/0:22,0:5:12.42:0,12,134	0/0:23,1:3:8.92:0,9,81	./.	0/1:13,8:12:57.14:283,0,57	0/0:55,3:44:45.46:0,45,1775	0/0:6,2:1:3.01:0,3,47	0/1:10,11:15:68.37:384,0,68	0/0:9,6:6:11.87:0,12,110	1/1:1,1:1:3.01:38,3,0	0/1:12,15:18:6.72:599,0,7	1/1:7,17:18:2.73:412,3,0	0/1:11,10:13:49.16:231,0,49	0/1:12,14:20:94.51:324,0,95	0/1:15,17:24:95.21:578,0,95	0/1:19,12:21:79.15:340,0,79	0/1:30,1:22:19.04:19,0,880	0/0:28,0:7:18.06:0,18,331	0/0:2,0:2:6.02:0,6,113	0/0:65,0:37:78.20:0,78,1470	1/1:6,2:3:6.02:90,6,0	./.	0/1:21,12:18:6.39:271,0,6	1/1:7,4:5:3.01:35,3,0	0/0:19,1:10:27.09:0,27,462	0/1:9,1:8:16.42:16,0,327	./.
chr10	83082445	.	GAGAGGC	G	399.62	PASS	AB=0.865;AC=2;AF=0.037;AN=54;BaseQRankSum=3.260;DP=748;FS=13.238;HRun=0;HaplotypeScore=168.4156;InbreedingCoeff=-0.0766;MQ=41.01;MQ0=37;MQRankSum=-2.142;QD=7.27;ReadPosRankSum=1.556;VQSLOD=1.9159;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:37:34.29:0,34,1025	0/0:2,0:2:3.01:0,3,93	0/0:50,0:9:11.88:0,12,158	0/0:57,0:14:23.66:0,24,399	0/0:12,0:10:3:0,3,85	0/0:22,0:19:36.08:0,36,746	0/0:48,0:44:63.19:0,63,1330	0/0:15,0:12:24.08:0,24,505	0/0:30,0:27:39.76:0,40,1257	0/0:34,0:22:42.92:0,43,1024	0/0:8,0:5:5.76:0,6,128	0/0:26,0:21:39.13:0,39,963	0/0:27,0:22:39.13:0,39,1000	0/0:26,0:20:39.13:0,39,899	0/0:30,0:25:36.12:0,36,839	0/0:34,0:31:24.32:0,24,1293	0/1:28,0:21:35.04:35,0,603	0/0:26,0:24:3.50:0,3,704	0/0:39,0:28:22.24:0,22,478	0/0:4,0:2:3.01:0,3,92	0/0:70,0:64:99:0,120,2956	0/0:11,0:9:15.05:0,15,381	0/0:6,0:5:6.02:0,6,185	0/0:41,0:37:76.50:0,77,1882	0/0:17,0:13:21.06:0,21,447	0/1:17,10:21:33.56:452,0,34	0/0:12,0:10:17.99:0,18,447	./.
chr10	83082557	.	CAG	C	212.33	PASS	AB=0.895;AC=15;AF=0.268;AN=56;BaseQRankSum=4.356;DP=753;FS=2.785;HRun=0;HaplotypeScore=94.3371;InbreedingCoeff=-0.0558;MQ=27.12;MQ0=209;MQRankSum=-2.247;QD=0.68;ReadPosRankSum=-3.141;VQSLOD=1.1188;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:39:31.44:0,31,431	0/0:7,1:6:4.25:0,4,44	0/0:19,0:2:2.01:0,2,6	0/0:18,0:1:2.74:0,3,12	1/1:9,0:5:0.47:1,0,0	1/1:14,2:11:0.75:7,1,0	0/0:37,0:25:24.24:0,24,216	0/0:36,0:6:14.97:0,15,120	0/1:22,8:17:32.96:106,0,33	0/0:26,0:12:18.88:0,19,146	0/1:8,0:3:0.04:0,0,0	0/1:22,5:16:45.17:66,0,45	0/1:15,2:9:25.84:26,0,78	0/1:23,1:9:3.62:4,0,18	0/1:28,5:18:26.54:27,0,92	0/1:27,5:17:30.52:31,0,88	0/1:45,3:29:22.86:23,0,280	0/0:38,0:34:61.95:0,62,813	0/0:29,0:7:9:0,9,102	0/0:7,0:4:9.01:0,9,113	0/0:95,4:51:32.98:0,33,247	0/1:10,1:6:0.08:0,0,0	0/0:12,2:10:4.54:0,5,39	0/1:38,5:30:25.13:25,0,103	0/1:12,2:11:29.25:29,0,45	0/0:25,0:14:27.01:0,27,358	0/0:17,0:13:16.53:0,17,158	0/0:10,0:7:17.96:0,18,188
chr10	83082607	.	C	CAG	3963.78	PASS	AB=0.735;AC=26;AF=0.481;AN=54;BaseQRankSum=-3.398;DP=670;FS=61.497;HRun=0;HaplotypeScore=79.2567;InbreedingCoeff=-0.4352;MQ=23.86;MQ0=204;MQRankSum=0.694;QD=7.29;ReadPosRankSum=7.795;VQSLOD=0.4848;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,19:30:99:420,0,247	0/1:6,1:4:40.47:40,0,103	./.	0/0:20,0:1:3.01:0,3,40	1/1:3,3:3:6.02:105,6,0	0/1:9,7:9:46.41:71,0,46	0/0:38,0:19:36.05:0,36,454	0/0:30,0:3:9.02:0,9,102	0/1:14,7:11:52.79:186,0,53	0/1:7,10:8:16.46:344,0,16	1/1:3,5:3:6.02:101,6,0	0/1:16,8:14:79.70:80,0,140	0/1:11,5:7:15.49:15,0,50	0/1:15,8:12:9.31:145,0,9	0/1:11,18:11:78.61:160,0,79	0/1:13,18:14:99:279,0,175	0/1:20,22:19:84.42:469,0,84	0/1:25,12:35:99:330,0,478	0/0:15,1:4:9.50:0,10,123	0/1:6,2:5:40.47:40,0,109	0/1:81,20:54:99:208,0,208	0/0:2,3:2:2.94:0,3,18	1/1:4,2:3:3.01:52,3,0	0/1:16,19:21:7.45:389,0,7	0/1:14,3:7:61.88:68,0,62	0/1:17,4:13:75.06:75,0,289	1/1:4,17:10:12:193,12,0	0/1:6,4:8:63.05:192,0,63
chr10	83082635	.	CAG	C	71.77	PASS	AB=0.921;AC=9;AF=0.173;AN=52;BaseQRankSum=4.076;DP=594;FS=42.741;HRun=0;HaplotypeScore=82.7999;InbreedingCoeff=-0.1181;MQ=23.65;MQ0=169;MQRankSum=-3.873;QD=0.47;ReadPosRankSum=-1.701;VQSLOD=-0.3304;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,1:27:43.18:0,43,666	0/0:4,0:3:6.02:0,6,103	0/0:13,0:1:3.01:0,3,42	./.	0/0:5,1:4:6.02:0,6,64	0/0:10,2:6:4.26:0,4,55	0/0:41,0:26:17.98:0,18,298	./.	0/0:13,0:5:15.05:0,15,242	0/0:16,2:8:21.07:0,21,365	0/0:8,0:3:6.02:0,6,101	0/1:18,2:12:37.43:37,0,91	0/1:11,2:6:69.02:69,0,78	0/0:18,3:10:10.11:0,10,157	0/1:21,2:8:21.31:21,0,152	0/1:25,2:15:30.61:31,0,351	0/1:30,1:15:15.25:15,0,440	0/0:27,1:24:12.06:0,12,858	0/0:17,0:7:21.06:0,21,340	0/0:5,0:4:9.03:0,9,150	0/0:93,1:48:67.14:0,67,1071	1/1:7,0:2:1.25:3,1,0	0/1:5,0:2:5.75:6,0,47	0/1:23,5:17:11.70:12,0,392	0/0:11,4:6:5.05:0,5,58	0/0:25,0:15:39.13:0,39,673	0/0:21,0:10:15.05:0,15,232	0/0:6,0:6:15.05:0,15,263
chr10	83082655	.	C	CAG	389.15	PASS	AB=0.943;AC=17;AF=0.340;AN=50;BaseQRankSum=6.582;DP=500;FS=4.488;HRun=0;HaplotypeScore=55.4073;InbreedingCoeff=0.3599;MQ=22.90;MQ0=166;MQRankSum=-2.617;QD=2.43;ReadPosRankSum=-2.028;VQSLOD=1.1477;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:15:21.03:0,21,263	0/1:3,0:3:0:0,0,0	0/1:27,0:3:5.88:6,0,33	0/0:46,0:7:10.94:0,11,156	./.	1/1:7,2:4:3.01:37,3,0	0/0:28,0:21:27.09:0,27,365	0/0:28,0:3:6.02:0,6,81	0/0:9,0:3:5.50:0,5,31	0/0:8,1:2:4.48:0,4,21	./.	0/1:11,2:5:7.68:74,0,8	1/1:9,2:6:5.99:75,6,0	1/1:10,1:6:3.22:13,3,0	1/1:13,2:4:0.34:66,0,0	0/0:11,1:5:5.31:0,5,75	1/1:18,6:10:13.24:153,13,0	0/1:18,1:16:43.22:43,0,211	0/0:24,0:7:18.06:0,18,243	0/0:7,0:4:6.02:0,6,81	0/0:87,3:51:14.87:0,15,852	./.	0/0:5,0:1:3.01:0,3,34	0/1:16,2:9:0.51:48,0,1	1/1:8,1:3:3.40:19,3,0	0/0:25,0:15:42.14:0,42,558	0/0:13,0:5:5.15:0,5,79	0/0:3,0:3:3.01:0,3,41
chr10	83082681	.	CAGAGAGAGGCAG	C	997.27	PASS	AB=0.926;AC=15;AF=0.326;AN=46;BaseQRankSum=5.518;DP=374;FS=58.106;HRun=0;HaplotypeScore=78.7478;InbreedingCoeff=0.2775;MQ=33.36;MQ0=62;MQRankSum=-4.356;QD=14.45;ReadPosRankSum=-1.180;VQSLOD=-0.5871;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:16:27.09:0,27,921	0/0:3,0:2:0:0,0,0	0/0:42,0:6:12.95:0,13,179	0/0:69,0:17:29.16:0,29,449	./.	./.	0/0:29,0:27:47.99:0,48,1453	0/0:10,0:8:21.07:0,21,424	1/1:3,0:2:3.01:60,3,0	1/1:5,0:3:3:43,3,0	./.	0/1:6,1:4:29.34:102,0,29	1/1:8,2:7:12.04:338,12,0	0/1:5,0:5:20.65:127,0,21	1/1:3,1:3:6.02:159,6,0	0/1:5,0:5:58.72:128,0,59	0/1:8,1:6:26.56:155,0,27	0/1:14,0:12:8.84:9,0,493	0/0:20,0:8:21.07:0,21,732	0/0:7,0:4:6.02:0,6,263	0/0:56,0:48:99:0,99,3955	./.	./.	1/1:5,1:4:2.93:20,3,0	0/0:3,0:2:0.47:0,0,1	0/0:20,0:16:45.12:0,45,1461	0/0:5,0:5:6.02:0,6,276	0/0:1,0:1:3.01:0,3,127
chr10	83082685	.	G	GGC	101.96	PASS	AB=0.916;AC=12;AF=0.250;AN=48;BaseQRankSum=4.702;DP=395;FS=47.460;HRun=0;HaplotypeScore=59.2720;InbreedingCoeff=0.2438;MQ=35.31;MQ0=63;MQRankSum=-4.091;QD=1.79;ReadPosRankSum=-1.937;VQSLOD=-0.4558;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:16:27.09:0,27,429	./.	0/0:43,0:6:17.42:0,17,223	0/0:70,0:17:21.57:0,22,443	./.	0/0:5,0:2:3.01:0,3,49	0/0:29,0:29:51.17:0,51,820	0/0:12,0:9:21.07:0,21,343	1/1:4,0:3:1.20:3,1,0	0/0:8,0:4:0.98:0,1,17	./.	0/1:5,1:4:30.63:66,0,31	0/0:7,3:7:1.89:0,2,23	1/1:7,0:6:6.89:66,7,0	1/1:4,0:3:0.94:31,1,0	1/1:6,0:5:0.82:8,1,0	0/0:8,0:6:10.99:0,11,76	0/1:13,1:12:18.30:18,0,186	0/0:21,0:9:21.07:0,21,343	0/0:6,1:3:6.02:0,6,98	0/0:57,0:50:99:0,99,1615	./.	0/0:6,0:3:2.72:0,3,12	0/1:9,0:7:28.87:29,0,30	0/1:5,0:5:0:0,0,0	0/0:21,0:16:48.14:0,48,757	0/0:5,0:5:9.03:0,9,147	0/0:1,0:1:3.01:0,3,49
chr10	83082689	.	GGC	G	261.12	PASS	AB=0.952;AC=11;AF=0.220;AN=50;BaseQRankSum=5.444;DP=390;FS=40.026;HRun=0;HaplotypeScore=55.5193;InbreedingCoeff=0.0830;MQ=35.71;MQ0=58;MQRankSum=-3.805;QD=2.64;ReadPosRankSum=-2.202;VQSLOD=-0.1716;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:15:27.09:0,27,524	0/1:3,0:2:0:0,0,0	0/1:37,3:8:54.11:54,0,105	0/0:67,2:17:8.78:0,9,389	./.	0/0:5,0:2:3.01:0,3,33	0/0:31,0:30:63.19:0,63,1147	0/0:12,0:9:24.08:0,24,467	1/1:4,0:3:2.97:40,3,0	0/0:6,0:3:3:0,3,26	./.	0/0:8,0:5:5.58:0,6,42	1/1:10,0:7:4.69:105,5,0	0/1:6,1:6:4.90:38,0,5	0/1:4,0:3:10.16:27,0,10	0/1:5,1:5:46.91:100,0,47	0/1:9,0:6:18.41:18,0,53	0/1:15,0:13:3.70:4,0,227	0/0:20,0:9:20.64:0,21,412	0/0:8,0:3:6.02:0,6,122	0/0:55,0:47:99:0,102,2055	./.	0/0:5,1:3:2.62:0,3,12	0/0:7,2:7:3.47:0,3,26	0/0:7,1:6:3.90:0,4,38	0/0:19,0:15:45.15:0,45,883	0/0:5,0:5:9.03:0,9,169	0/0:1,0:1:3.01:0,3,61
chr10	83082691	.	CAG	C	228.38	PASS	AB=0.890;AC=11;AF=0.239;AN=46;BaseQRankSum=5.574;DP=382;FS=45.296;HRun=0;HaplotypeScore=53.4472;InbreedingCoeff=0.2703;MQ=35.86;MQ0=56;MQRankSum=-3.261;QD=2.72;ReadPosRankSum=-1.163;VQSLOD=-0.2896;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:27.09:0,27,459	./.	0/1:40,0:8:0.30:0,0,158	0/0:68,2:19:7.78:0,8,410	./.	./.	0/0:29,0:29:60.20:0,60,1014	0/0:12,0:9:24.06:0,24,381	1/1:3,1:3:3.01:39,3,0	0/0:7,0:4:2.98:0,3,22	./.	0/0:8,0:5:1.39:0,1,30	1/1:9,1:7:5.42:99,5,0	0/1:4,2:6:3.36:34,0,3	0/1:4,0:3:10.42:26,0,10	0/1:4,2:5:36.34:115,0,36	1/1:7,1:5:1.75:33,2,0	0/0:12,1:11:11.83:0,12,205	0/0:20,0:10:18.05:0,18,264	0/0:8,0:3:6.02:0,6,103	0/0:51,0:46:99:0,102,1718	./.	0/1:5,0:2:0:0,0,0	0/0:8,1:7:0.47:0,0,1	0/0:7,0:6:3.01:0,3,37	0/0:19,0:15:39.13:0,39,652	0/0:5,0:5:6.02:0,6,103	0/0:1,0:1:3.01:0,3,51
chr10	83082695	.	G	GGC	196.67	PASS	AB=0.813;AC=7;AF=0.152;AN=46;BaseQRankSum=4.126;DP=376;FS=31.171;HRun=0;HaplotypeScore=57.0018;InbreedingCoeff=0.0397;MQ=36.85;MQ0=42;MQRankSum=-2.636;QD=3.93;ReadPosRankSum=-1.515;VQSLOD=-0.0699;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:27.09:0,27,439	./.	0/0:36,0:8:23.71:0,24,277	0/0:64,0:21:27.13:0,27,464	./.	./.	0/0:27,0:27:60.20:0,60,968	0/0:12,0:11:30.07:0,30,440	0/0:5,0:3:2.96:0,3,19	0/0:6,1:4:2.88:0,3,15	./.	0/1:7,1:6:34.10:107,0,34	0/1:7,2:7:34.38:48,0,34	0/1:6,1:6:2.32:2,0,29	0/1:3,2:4:17.02:55,0,17	0/0:5,1:5:13.15:0,13,112	0/1:7,2:6:3.97:78,0,4	0/0:10,0:9:14.54:0,15,205	0/0:20,1:11:21.06:0,21,334	0/0:7,0:3:6.02:0,6,98	0/0:48,1:44:99:0,102,1658	./.	0/0:5,1:3:3.01:0,3,45	1/1:9,2:9:2.46:19,2,0	0/0:7,1:6:3.85:0,4,22	0/0:19,0:16:45.12:0,45,688	0/0:4,0:4:6.02:0,6,98	0/0:1,0:1:3.01:0,3,49
chr10	83083108	.	C	CAA	7047.39	PASS	AB=0.603;AC=44;AF=0.786;AN=56;BaseQRankSum=-2.264;DP=451;FS=3.966;HRun=12;HaplotypeScore=59.8120;InbreedingCoeff=0.7247;MQ=76.32;MQ0=2;MQRankSum=-0.979;QD=18.40;ReadPosRankSum=-0.440;VQSLOD=3.7081;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:18:44.43:0,44,383	1/1:1,3:4:6.02:84,6,0	0/0:12,0:12:6.27:0,6,54	0/0:13,0:13:5.10:0,5,52	1/1:8,16:25:38.80:408,39,0	1/1:5,16:21:24.08:337,24,0	0/0:18,0:18:44.95:0,45,411	1/1:9,15:26:47.62:602,48,0	1/1:4,8:12:15.05:210,15,0	1/1:6,11:19:41.49:445,41,0	1/1:2,13:15:27.05:352,27,0	1/1:13,0:13:20.98:234,21,0	1/1:2,9:11:6.02:84,6,0	1/1:3,11:14:17.54:214,18,0	1/1:2,14:20:23.05:256,23,0	1/1:2,13:16:24.08:332,24,0	0/1:5,14:19:0.72:287,0,1	1/1:5,14:20:29.07:354,29,0	1/1:8,13:25:55.59:631,56,0	1/1:1,11:13:23.97:291,24,0	0/0:7,0:7:21:0,21,188	1/1:1,13:14:39.02:502,39,0	1/1:6,11:16:34.41:434,34,0	1/1:3,4:9:11.52:130,12,0	1/1:1,12:18:40.97:481,41,0	0/1:7,0:17:26.05:95,0,26	1/1:4,15:23:20.04:224,20,0	1/1:1,0:10:17.47:60,17,0
chr10	83083495	.	G	GAGAA	32443.49	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-11.751;DP=607;FS=11.689;HRun=0;HaplotypeScore=90.6760;InbreedingCoeff=0.9408;MQ=85.31;MQ0=0;MQRankSum=-9.963;QD=66.21;ReadPosRankSum=4.601;VQSLOD=6.8266;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,2315	1/1:1,6:7:15.05:424,15,0	0/0:31,0:31:93.17:0,93,1754	0/0:18,0:18:38.93:0,39,665	1/1:0,15:16:39.05:878,39,0	1/1:0,18:18:42.14:1047,42,0	0/0:28,0:28:81.28:0,81,1664	1/1:2,21:25:75.24:1913,75,0	1/1:1,29:31:81.28:2292,81,0	1/1:0,12:14:42.08:1025,42,0	1/1:1,9:10:27.09:620,27,0	1/1:0,25:26:75.26:2109,75,0	1/1:1,19:22:60.21:1676,60,0	1/1:0,17:18:47.85:1357,48,0	1/1:1,20:23:54.19:1511,54,0	1/1:4,16:21:51.18:1426,51,0	1/1:1,28:32:66.23:1819,66,0	1/1:0,18:19:51.13:1376,51,0	1/1:4,13:19:51.15:1244,51,0	1/1:2,14:19:51.05:1081,51,0	1/1:3,23:28:54.61:1408,55,0	1/1:2,14:17:42.14:1032,42,0	1/1:2,15:19:51.07:1341,51,0	1/1:2,26:33:69.71:1922,70,0	1/1:1,9:13:27.09:716,27,0	1/1:1,25:26:12.33:1899,12,0	1/1:4,25:32:84.25:2245,84,0	1/1:0,1:1:3.01:85,3,0
chr10	83085210	.	T	TGGG	24607.51	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=19.980;DP=788;FS=6.968;HRun=2;HaplotypeScore=165.8381;InbreedingCoeff=0.9997;MQ=80.79;MQ0=0;MQRankSum=-13.381;QD=57.76;ReadPosRankSum=2.890;VQSLOD=4.7127;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,2306	1/1:2,10:13:33.11:717,33,0	0/0:33,0:33:86.47:0,86,1432	0/0:18,0:18:46.97:0,47,732	1/1:0,15:17:33.11:755,33,0	1/1:1,16:17:48.16:1077,48,0	0/0:42,0:42:99:0,117,1952	0/0:10,0:10:27.09:0,27,429	1/1:3,32:35:93.32:2073,93,0	1/1:1,26:29:75.26:1672,75,0	1/1:3,11:14:30.10:677,30,0	1/1:4,31:35:99:2105,99,0	1/1:1,27:28:81.28:1814,81,0	1/1:1,22:23:60.21:1378,60,0	1/1:1,30:32:84.29:1904,84,0	1/1:2,24:26:72.25:1618,72,0	1/1:9,36:45:99:2601,120,0	0/0:29,0:29:81.28:0,81,1353	0/0:24,0:24:69.21:0,69,1112	0/0:27,0:27:81.26:0,81,1329	0/0:59,0:59:99:0,147,2457	1/1:2,28:31:72.25:1635,72,0	1/1:1,17:18:42.07:966,42,0	1/1:7,26:33:84.24:1808,84,0	1/1:1,29:30:81.23:1805,81,0	0/0:32,0:32:93.32:0,93,1541	0/0:27,0:27:81.26:0,81,1320	0/0:15,0:15:39.13:0,39,643
chr10	83085292	.	AGT	A	5086.36	PASS	AB=0.786;AC=31;AF=0.554;AN=56;BaseQRankSum=6.594;DP=839;FS=4.650;HRun=0;HaplotypeScore=222.6193;InbreedingCoeff=0.8734;MQ=51.63;MQ0=11;MQRankSum=-8.248;QD=14.13;ReadPosRankSum=4.304;VQSLOD=4.5878;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:78.04:0,78,1089	1/1:6,11:17:32.88:335,33,0	0/0:42,0:13:11.71:0,12,106	0/0:53,0:26:25.73:0,26,252	1/1:13,13:27:24.91:267,25,0	1/1:5,2:7:9.03:101,9,0	0/0:56,1:57:35.40:0,35,1217	0/0:26,0:23:7.83:0,8,61	1/1:11,10:21:33.09:371,33,0	1/1:25,16:38:70.52:699,71,0	1/1:9,3:12:2.67:35,3,0	1/1:13,13:26:41.89:430,42,0	1/1:14,11:24:50.52:548,51,0	1/1:12,7:18:26.57:276,27,0	1/1:18,10:28:33.67:354,34,0	1/1:13,18:30:54.04:559,54,0	1/1:12,5:17:23.04:249,23,0	0/0:25,0:32:33.63:0,34,358	0/0:28,0:28:36.77:0,37,302	0/0:23,0:23:28.59:0,29,215	0/0:65,0:89:99:0,100,883	1/1:13,14:27:24.04:253,24,0	1/1:4,13:17:21.05:225,21,0	0/1:16,6:22:15.38:62,0,15	1/1:9,11:21:29.93:322,30,0	0/0:37,0:37:50.77:0,51,1119	0/0:29,0:29:40.01:0,40,344	0/0:20,0:20:10.29:0,10,540
chr10	83085316	.	AGT	A	6135.43	PASS	AB=0.828;AC=37;AF=0.661;AN=56;BaseQRankSum=10.100;DP=855;FS=4.045;HRun=0;HaplotypeScore=245.4009;InbreedingCoeff=0.7188;MQ=41.77;MQ0=23;MQRankSum=-6.327;QD=13.03;ReadPosRankSum=-2.302;VQSLOD=4.0976;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:83.87:0,84,1307	1/1:6,10:16:21.06:248,21,0	0/0:55,0:12:21.12:0,21,286	0/0:70,0:17:25.90:0,26,259	1/1:10,16:26:14.73:163,15,0	0/1:7,2:9:31.50:127,0,32	0/0:57,0:56:99:0,100,1652	1/1:24,1:22:33.53:382,34,0	1/1:18,11:28:45.14:538,45,0	1/1:25,18:40:68.16:753,68,0	1/1:5,5:10:8.69:112,9,0	1/1:11,15:25:44.56:482,45,0	1/1:17,11:27:36.05:407,36,0	1/1:11,6:16:17.58:185,18,0	1/1:19,11:29:28.96:321,29,0	1/1:16,16:31:51.03:557,51,0	1/1:13,1:14:23.97:256,24,0	0/0:29,0:29:33.57:0,34,541	0/1:24,3:24:42.49:241,0,42	1/1:22,2:24:16.83:316,17,0	0/0:80,0:78:99:0,144,2168	1/1:7,15:22:9.02:108,9,0	1/1:1,12:14:20.73:187,21,0	0/1:16,7:23:30.01:31,0,30	1/1:13,12:25:20.77:344,21,0	0/0:30,0:30:66.23:0,66,1093	1/1:27,4:31:5:376,5,0	0/0:21,0:21:45.13:0,45,692
chr10	83085318	.	T	TGTGA	2664.09	PASS	AB=0.994;AC=18;AF=0.321;AN=56;BaseQRankSum=2.733;DP=853;FS=2.722;HRun=0;HaplotypeScore=282.6034;InbreedingCoeff=0.0018;MQ=41.49;MQ0=22;MQRankSum=2.501;QD=7.42;ReadPosRankSum=-5.127;VQSLOD=1.8301;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:99:0,99,1649	0/1:16,0:16:12.06:12,0,103	0/0:59,0:12:20.66:0,21,404	0/0:69,0:16:28.14:0,28,428	0/0:26,0:26:0.09:0,0,89	0/1:9,0:9:11.66:12,0,57	0/0:54,0:53:99:0,132,2111	1/1:25,0:22:53.03:369,53,0	0/1:29,0:28:83.52:110,0,84	0/1:44,0:42:54.76:55,0,278	0/1:13,0:13:13.90:26,0,14	0/1:26,0:25:74.61:75,0,99	0/0:26,0:25:20.06:0,20,211	0/1:17,0:16:1.83:2,0,93	0/1:30,0:29:68.70:69,0,99	0/1:29,0:28:21.91:22,0,101	0/1:14,0:14:75.68:76,0,79	0/0:27,0:27:7.15:0,7,266	0/1:23,2:22:2.33:526,0,2	1/1:16,7:26:47.20:630,47,0	0/0:80,0:79:99:0,144,2144	0/0:22,0:22:7.19:0,7,82	0/0:16,0:16:3.05:0,3,82	0/0:22,0:22:0.76:0,1,64	0/1:24,0:24:48.73:49,0,105	0/0:32,0:32:87.13:0,87,1415	1/1:25,5:31:58.43:800,58,0	0/0:21,0:21:54.05:0,54,882
chr10	83085330	.	TTA	T	90.98	PASS	AB=0.984;AC=11;AF=0.196;AN=56;BaseQRankSum=12.715;DP=835;FS=0.458;HRun=0;HaplotypeScore=266.3855;InbreedingCoeff=-0.0046;MQ=42.37;MQ0=23;MQRankSum=-10.478;QD=0.41;ReadPosRankSum=-0.540;VQSLOD=1.9797;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,1:40:99:0,108,1987	0/1:15,0:15:2.68:3,0,23	0/0:64,1:16:9.17:0,9,538	0/0:68,1:17:8.18:0,8,407	0/0:26,1:27:7.19:0,7,54	0/0:11,0:11:8.30:0,8,38	0/0:48,1:48:80.23:0,80,2306	0/0:27,1:28:24.74:0,25,821	0/0:29,0:28:1.94:0,2,54	0/1:41,2:42:45.13:45,0,195	0/0:12,1:13:10.79:0,11,51	0/1:28,0:27:6.05:6,0,61	1/1:18,0:18:13.41:74,13,0	0/1:15,1:16:10.29:12,0,10	0/0:28,0:28:3.78:0,4,40	0/1:28,0:28:20.99:21,0,41	0/1:10,0:10:10.15:32,0,10	0/0:18,1:19:13.22:0,13,689	0/0:22,1:20:28.73:0,29,553	0/0:29,1:30:23.15:0,23,641	0/0:81,0:81:99:0,179,3221	0/1:20,0:20:2.83:3,0,15	0/1:19,0:19:8.87:9,0,10	0/0:24,0:24:0.44:0,0,10	0/1:23,1:24:23.58:24,0,51	0/0:30,0:30:86.65:0,87,1516	0/0:28,0:28:43.54:0,44,524	0/0:17,0:17:47.65:0,48,884
chr10	83085332	.	AGT	A	8802.99	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=10.522;DP=852;FS=0.320;HRun=0;HaplotypeScore=244.3708;InbreedingCoeff=0.9899;MQ=42.52;MQ0=24;MQRankSum=-5.239;QD=24.32;ReadPosRankSum=-4.811;VQSLOD=3.7513;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:99:0,102,1727	1/1:2,13:15:39.12:491,39,0	0/0:66,0:16:42.06:0,42,620	0/0:71,0:19:47.09:0,47,586	1/1:6,21:27:39.04:476,39,0	1/1:2,9:11:33.06:398,33,0	0/0:47,0:47:99:0,109,1930	0/0:30,0:29:78.27:0,78,1300	1/1:7,22:28:60.19:771,60,0	1/1:11,34:44:99:1200,99,0	1/1:2,11:13:23.74:300,24,0	1/1:11,18:28:54.04:636,54,0	1/1:5,13:18:39.08:483,39,0	1/1:8,10:18:29.66:366,30,0	1/1:8,20:28:66.05:826,66,0	1/1:9,20:29:59.82:753,60,0	1/1:1,9:10:30.10:387,30,0	0/0:19,0:19:9.03:0,9,571	0/0:23,0:20:45.11:0,45,721	0/0:30,0:30:65.56:0,66,1074	0/0:83,0:83:99:0,167,2742	1/1:7,14:21:33.10:411,33,0	1/1:5,15:20:38.99:427,39,0	1/1:8,16:24:17:276,17,0	1/1:9,16:25:50.50:604,50,0	0/0:32,0:32:78.26:0,78,1296	0/0:28,0:28:69.19:0,69,1087	0/0:17,0:17:48.14:0,48,775
chr10	83085356	.	AGT	A	1488.76	PASS	AB=0.793;AC=2;AF=0.036;AN=56;BaseQRankSum=-3.378;DP=917;FS=4.409;HRun=0;HaplotypeScore=296.0940;InbreedingCoeff=-0.0287;MQ=44.57;MQ0=21;MQRankSum=1.376;QD=15.51;ReadPosRankSum=3.868;VQSLOD=3.0196;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:99:0,120,1966	0/0:19,0:19:48.12:0,48,791	0/0:48,0:12:33.07:0,33,534	0/0:50,0:15:34.18:0,34,521	0/0:32,0:32:57.19:0,57,966	0/0:14,0:14:36.12:0,36,615	0/0:39,0:39:93.26:0,93,1562	0/0:43,0:41:99:0,99,1654	0/0:40,0:37:87.30:0,87,1488	0/0:62,0:60:99:0,159,2694	0/0:26,0:26:63.22:0,63,1078	0/0:29,0:28:59.87:0,60,965	0/0:24,0:23:57.20:0,57,972	0/0:21,0:21:45.15:0,45,769	0/0:36,0:36:66.23:0,66,1129	0/0:34,0:33:69.23:0,69,1180	0/0:14,0:13:36.12:0,36,616	0/1:17,0:17:0.99:1,0,386	0/0:27,0:21:48.16:0,48,818	0/0:25,0:25:60.21:0,60,1029	0/1:23,56:77:76.94:1563,0,77	0/0:28,0:28:51.17:0,51,872	0/0:26,0:26:44.90:0,45,770	0/0:21,0:21:23.77:0,24,411	0/0:32,0:32:63.20:0,63,1079	0/0:32,0:32:93.26:0,93,1505	0/0:34,0:34:84.29:0,84,1439	0/0:18,0:18:40.93:0,41,638
chr10	83085381	.	A	ATG	3796.21	PASS	AB=0.788;AC=9;AF=0.161;AN=56;BaseQRankSum=-8.525;DP=945;FS=3.118;HRun=0;HaplotypeScore=310.3876;InbreedingCoeff=0.8812;MQ=47.24;MQ0=12;MQRankSum=-0.496;QD=27.12;ReadPosRankSum=-0.978;VQSLOD=3.2867;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,123,1486	0/0:17,0:17:39.09:0,39,471	0/0:39,0:15:29.64:0,30,331	0/0:55,0:19:30.08:0,30,356	0/0:34,0:34:71.87:0,72,786	0/0:19,0:19:53.94:0,54,560	0/0:46,0:46:90.84:0,91,1186	1/1:18,22:35:63.18:969,63,0	0/0:41,0:38:96.09:0,96,1096	0/0:73,0:70:99:0,173,1902	0/0:24,0:24:62.94:0,63,655	0/0:32,0:31:69.10:0,69,789	0/0:28,0:26:57.12:0,57,677	0/0:22,0:21:45.01:0,45,490	0/0:34,0:33:66.13:0,66,780	0/0:26,0:25:63.11:0,63,724	0/0:14,0:13:33.05:0,33,376	1/1:12,6:17:12.58:312,13,0	0/1:19,7:19:7.50:374,0,8	1/1:6,16:22:60.18:935,60,0	0/0:84,0:79:99:0,106,1156	0/0:32,0:32:71.84:0,72,759	0/0:29,0:29:56.81:0,57,571	0/0:21,0:21:29.86:0,30,303	0/0:33,0:34:79.16:0,79,791	0/0:37,1:38:40.76:0,41,1005	1/1:9,25:34:75.23:1206,75,0	0/0:15,0:15:39.09:0,39,461
chr10	83085414	.	A	AGT	5269.93	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=-8.916;DP=925;FS=6.056;HRun=0;HaplotypeScore=328.8676;InbreedingCoeff=0.7854;MQ=44.74;MQ0=18;MQRankSum=0.230;QD=20.27;ReadPosRankSum=-2.335;VQSLOD=3.8336;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,111,1398	0/0:15,0:15:26.85:0,27,159	0/0:58,0:18:16.23:0,16,224	0/0:52,0:15:2.25:0,2,92	0/0:33,0:33:31.58:0,32,296	0/0:15,0:15:24.87:0,25,220	0/0:48,0:48:99:0,129,1571	1/1:20,8:25:27.04:388,27,0	0/0:36,0:35:49.86:0,50,382	0/0:70,0:66:99:0,107,1053	0/0:25,0:25:21.68:0,22,183	0/0:30,0:29:43.46:0,43,403	0/0:25,0:23:39.26:0,39,295	0/0:22,0:21:18.53:0,19,167	0/0:34,0:33:23.71:0,24,196	0/0:28,0:27:29.37:0,29,248	0/1:13,0:12:8.62:10,0,9	1/1:12,13:24:18.39:784,18,0	1/1:11,10:18:36:526,36,0	1/1:9,12:22:23.95:356,24,0	0/1:56,0:50:50.71:128,0,51	0/0:43,0:43:61.58:0,62,556	0/0:36,0:36:50.02:0,50,409	0/0:15,0:15:5.32:0,5,45	0/0:30,0:30:50.76:0,51,425	1/1:9,33:43:54.29:1410,54,0	1/1:12,14:26:54.16:852,54,0	1/1:3,19:22:16.38:816,16,0
chr10	83085425	.	G	GTT	2329.77	PASS	AB=0.980;AC=10;AF=0.179;AN=56;BaseQRankSum=-4.646;DP=882;FS=0.367;HRun=1;HaplotypeScore=335.2404;InbreedingCoeff=0.0215;MQ=44.09;MQ0=17;MQRankSum=2.154;QD=9.83;ReadPosRankSum=6.512;VQSLOD=-0.0669;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,120,1872	0/0:16,0:16:46.88:0,47,445	0/0:52,0:15:25.04:0,25,334	0/0:40,0:11:6.18:0,6,170	0/0:31,0:31:41.49:0,41,561	0/0:15,0:15:35.36:0,35,377	0/0:50,0:50:99:0,141,2153	0/1:31,0:25:99:142,0,227	0/0:33,0:33:67.11:0,67,727	0/0:71,0:68:99:0,175,2035	0/0:27,0:27:36.25:0,36,396	0/0:28,0:27:53.78:0,54,646	0/0:27,0:24:46.90:0,47,511	0/0:21,0:20:32.40:0,32,351	0/0:32,0:31:41.81:0,42,427	0/0:28,0:27:26.60:0,27,431	0/1:12,0:11:2.44:2,0,79	0/1:25,0:25:52.29:371,0,52	1/1:19,0:15:0.61:215,1,0	0/1:19,0:19:23.92:153,0,24	0/1:37,9:40:2.03:228,0,2	0/0:44,0:44:92.32:0,92,1052	0/0:37,0:37:68.95:0,69,786	0/0:16,0:16:13.36:0,13,142	0/0:30,0:30:67.24:0,67,797	0/1:39,0:39:82:557,0,82	0/1:24,0:24:49.32:416,0,49	0/1:22,0:22:15.77:382,0,16
chr10	83085438	.	A	AGT	376.93	PASS	AB=0.956;AC=7;AF=0.125;AN=56;BaseQRankSum=5.305;DP=796;FS=13.123;HRun=0;HaplotypeScore=319.8249;InbreedingCoeff=0.1302;MQ=42.78;MQ0=19;MQRankSum=-6.133;QD=2.13;ReadPosRankSum=1.041;VQSLOD=0.7720;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,99,1298	0/1:13,0:13:7.72:8,0,175	0/0:55,0:16:18.52:0,19,244	0/0:41,0:14:4.65:0,5,145	0/0:27,0:27:2.46:0,2,40	0/0:15,0:15:8.92:0,9,97	0/0:43,0:43:71.05:0,71,1309	0/0:42,0:36:93.22:0,93,1095	0/0:21,0:21:7.94:0,8,104	0/1:50,3:50:18.02:18,0,940	0/0:20,0:20:20.26:0,20,172	0/0:24,0:24:25.10:0,25,204	0/0:28,0:25:38.74:0,39,322	0/0:16,0:15:15.23:0,15,100	0/0:28,0:27:26.01:0,26,245	0/0:23,0:22:27.77:0,28,242	0/1:9,1:9:21.29:95,0,21	0/0:23,0:23:60.17:0,60,724	0/0:18,0:15:36.10:0,36,425	0/0:21,0:21:47.93:0,48,483	1/1:20,8:25:21.07:290,21,0	0/1:42,2:44:77.53:78,0,161	0/0:29,0:29:27.88:0,28,200	0/0:11,4:15:7.77:0,8,64	0/1:27,1:28:19.99:20,0,58	0/0:37,0:37:78.47:0,78,1050	0/0:24,0:24:53.57:0,54,617	0/0:23,0:23:57.15:0,57,695
chr10	83085439	.	G	GTA	140.17	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=4.781;DP=799;FS=4.062;HRun=0;HaplotypeScore=324.4572;InbreedingCoeff=0.5975;MQ=42.74;MQ0=18;MQRankSum=-5.184;QD=3.50;ReadPosRankSum=1.707;VQSLOD=1.9353;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,122,1679	0/0:13,0:13:18.09:0,18,332	0/0:54,0:15:34.59:0,35,369	0/0:40,0:13:17.18:0,17,209	0/0:27,0:27:26.47:0,26,211	0/0:15,0:15:23.67:0,24,218	0/0:43,0:43:97.95:0,98,1654	0/0:43,0:37:93.31:0,93,1405	0/0:21,0:21:33.45:0,33,267	0/0:53,0:50:51.42:0,51,1607	0/0:20,0:20:23.46:0,23,280	0/0:24,0:24:45.73:0,46,416	0/0:27,0:24:47.74:0,48,487	0/0:16,0:15:24.19:0,24,223	0/0:29,0:28:40.77:0,41,413	0/0:23,0:22:39.91:0,40,403	0/1:10,0:9:37.31:58,0,37	0/0:25,0:25:62.24:0,62,913	0/0:17,0:14:36.12:0,36,544	0/0:21,0:21:48.13:0,48,680	1/1:25,5:26:17.42:185,17,0	0/0:45,0:45:24.21:0,24,535	0/0:29,0:29:51.92:0,52,455	0/0:15,0:15:8.22:0,8,115	0/0:28,0:28:32.82:0,33,305	0/0:37,0:37:99:0,108,1469	0/0:23,0:23:53.27:0,53,801	0/0:24,0:24:60.18:0,60,889
chr10	83085446	.	AGT	A	4148.53	PASS	AB=0.708;AC=27;AF=0.482;AN=56;BaseQRankSum=12.168;DP=775;FS=16.140;HRun=0;HaplotypeScore=297.4516;InbreedingCoeff=0.4855;MQ=43.38;MQ0=15;MQRankSum=-11.579;QD=10.50;ReadPosRankSum=-1.959;VQSLOD=1.9478;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,126,2001	1/1:3,7:10:23.58:259,24,0	0/0:53,0:16:22.39:0,22,477	0/0:40,0:13:21.28:0,21,327	1/1:9,17:26:24.65:193,25,0	1/1:6,8:14:14.91:154,15,0	0/0:45,0:45:99:0,99,1656	0/0:47,0:42:99:0,108,1752	0/1:8,11:19:15.29:150,0,15	0/1:22,28:48:99:884,0,353	1/1:4,14:18:14.82:175,15,0	0/1:6,15:21:10.51:213,0,11	0/1:6,18:22:9.91:391,0,10	0/1:6,8:14:6.09:129,0,6	1/1:6,22:27:36.28:385,36,0	1/1:5,17:21:5.84:270,6,0	0/1:7,1:8:31.06:31,0,128	0/0:28,0:28:78.26:0,78,1278	0/0:17,0:14:33.10:0,33,539	0/0:20,0:20:48.12:0,48,737	0/1:30,0:27:15.83:16,0,38	1/1:17,25:42:6.08:350,6,0	1/1:9,19:28:23.71:225,24,0	1/1:8,8:16:8.74:95,9,0	1/1:12,13:25:23.57:228,24,0	0/0:38,0:38:99:0,108,1737	0/0:23,0:23:63.22:0,63,1068	0/0:22,0:22:54.18:0,54,922
chr10	83085529	.	A	ATG	7304.57	PASS	AB=0.991;AC=37;AF=0.661;AN=56;BaseQRankSum=9.737;DP=805;FS=40.141;HRun=0;HaplotypeScore=357.0106;InbreedingCoeff=0.6792;MQ=50.45;MQ0=2;MQRankSum=-11.446;QD=13.40;ReadPosRankSum=-4.022;VQSLOD=3.3405;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:87.40:0,87,702	1/1:3,5:8:15.05:230,15,0	1/1:15,0:3:2.99:32,3,0	0/0:15,0:12:16.66:0,17,98	1/1:8,8:16:17.79:259,18,0	1/1:3,17:20:47.60:753,48,0	0/0:46,0:45:41.37:0,41,484	0/0:42,0:41:8.26:0,8,326	1/1:14,30:39:63.53:957,64,0	1/1:12,6:16:15.86:267,16,0	1/1:4,3:7:2.49:46,2,0	1/1:8,23:28:41.61:651,42,0	1/1:14,26:39:73.11:1021,73,0	1/1:7,25:29:26.44:694,26,0	1/1:15,27:42:56.44:879,56,0	1/1:13,15:26:19.56:516,20,0	1/1:3,4:6:8.98:109,9,0	0/0:31,0:31:49.29:0,49,391	0/0:17,0:11:19.16:0,19,122	0/1:27,0:27:20.15:20,0,297	0/1:108,0:100:55.59:56,0,779	1/1:6,9:15:14.53:228,15,0	1/1:7,5:12:15:214,15,0	1/1:16,7:23:12.27:133,12,0	1/1:2,11:13:15.52:229,16,0	0/1:37,1:38:11.07:11,0,340	0/0:32,0:30:48.76:0,49,452	0/0:24,0:24:62.04:0,62,416
chr10	83085536	.	A	AAT	4075.76	PASS	AB=0.970;AC=26;AF=0.464;AN=56;BaseQRankSum=15.456;DP=831;FS=48.464;HRun=0;HaplotypeScore=366.6238;InbreedingCoeff=0.3979;MQ=48.65;MQ0=3;MQRankSum=-11.848;QD=8.64;ReadPosRankSum=1.753;VQSLOD=1.4638;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,171,2366	0/1:8,0:8:1.02:113,0,1	0/0:23,0:5:4.71:0,5,22	0/0:18,0:12:4.93:0,5,106	0/1:13,0:13:21.33:127,0,21	1/1:23,0:23:47.52:465,48,0	0/0:45,0:44:99:0,125,1822	0/0:41,0:40:79.22:0,79,1408	1/1:45,0:40:23.42:560,23,0	0/1:17,0:15:88.59:89,0,171	0/1:8,0:8:18.49:24,0,18	1/1:30,0:27:21.41:355,21,0	1/1:38,0:36:1.87:505,2,0	1/1:34,0:31:8.34:393,8,0	1/1:42,0:42:22.36:493,22,0	0/1:25,0:23:57.60:269,0,58	1/1:7,0:6:5.95:46,6,0	0/0:32,0:32:86.89:0,87,1276	0/0:19,0:13:39.06:0,39,526	0/0:26,0:26:72.21:0,72,1088	0/1:116,11:118:99:162,0,2511	1/1:12,0:12:14.43:126,14,0	0/1:9,0:9:8.96:100,0,9	0/1:17,4:21:3.43:115,0,3	1/1:13,0:13:15.43:133,15,0	0/0:36,0:36:85.92:0,86,1473	0/0:33,0:31:81.16:0,81,1202	0/0:25,0:25:72.18:0,72,1091
chr10	83085548	.	T	TG	1475.88	PASS	AB=0.972;AC=24;AF=0.429;AN=56;BaseQRankSum=12.936;DP=825;FS=69.202;HRun=1;HaplotypeScore=351.4146;InbreedingCoeff=0.4450;MQ=49.74;MQ0=6;MQRankSum=-10.730;QD=4.45;ReadPosRankSum=0.159;VQSLOD=-0.1586;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,153,2035	1/1:6,0:6:11.39:63,11,0	0/0:28,0:10:21.51:0,22,247	0/1:28,0:14:2.09:2,0,139	1/1:11,0:10:16.33:144,16,0	1/1:23,1:23:35.26:158,35,0	0/0:46,0:45:99:0,132,1806	0/0:47,0:46:99:0,120,1605	0/1:39,1:36:40.23:166,0,40	0/1:11,0:9:9.55:10,0,144	0/1:6,1:7:0.17:22,0,0	0/1:27,0:25:8.99:159,0,9	1/1:32,0:30:10.23:212,10,0	0/1:31,1:30:30.09:150,0,30	1/1:41,0:41:6.87:225,7,0	0/1:21,1:20:70.45:94,0,70	0/0:7,0:6:9.06:0,9,116	0/0:30,0:30:84.04:0,84,1106	0/0:17,0:12:36.12:0,36,498	0/0:26,0:26:78.26:0,78,1080	0/0:147,0:137:99:0,258,3403	1/1:9,0:9:9.69:59,10,0	1/1:7,0:7:11.29:85,11,0	0/1:23,0:23:19.06:19,0,48	1/1:12,0:12:12.72:105,13,0	0/0:35,0:35:80.92:0,81,1336	0/0:34,0:32:93.20:0,93,1218	0/0:22,0:22:66.21:0,66,906
chr10	83085554	.	A	AGT	8333.89	PASS	AB=0.938;AC=33;AF=0.589;AN=56;BaseQRankSum=18.094;DP=827;FS=53.260;HRun=0;HaplotypeScore=328.5251;InbreedingCoeff=0.8614;MQ=48.93;MQ0=9;MQRankSum=-17.188;QD=18.73;ReadPosRankSum=-6.626;VQSLOD=2.3807;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,126,1605	1/1:3,3:6:9.03:151,9,0	0/0:33,0:10:15.89:0,16,259	0/0:33,0:17:5.28:0,5,124	1/1:5,4:8:6.02:96,6,0	1/1:6,17:22:48.16:754,48,0	0/0:48,0:47:99:0,117,1471	0/0:50,0:49:99:0,111,1337	1/1:11,27:34:42.69:1132,43,0	1/1:2,9:9:24.08:402,24,0	1/1:2,5:7:12.04:182,12,0	1/1:6,19:24:48.16:795,48,0	1/1:4,22:24:54.18:862,54,0	1/1:8,23:29:51.17:821,51,0	1/1:10,31:41:69.70:1086,70,0	1/1:6,15:19:38.90:574,39,0	1/1:1,6:6:15.05:251,15,0	0/0:33,0:33:73.58:0,74,948	0/0:16,0:13:27.08:0,27,336	0/0:29,0:29:81.19:0,81,994	0/1:140,10:140:99:102,0,2904	1/1:3,6:9:18.06:290,18,0	1/1:2,3:5:6.02:97,6,0	1/1:6,18:24:23.19:389,23,0	1/1:2,9:11:21.07:350,21,0	0/0:36,0:36:96.28:0,96,1184	0/0:32,0:30:75.23:0,75,947	0/0:23,0:23:54.11:0,54,630
chr10	83085578	.	A	AGTGT	5566.48	PASS	AB=0.693;AC=30;AF=0.536;AN=56;BaseQRankSum=15.532;DP=772;FS=91.374;HRun=0;HaplotypeScore=265.8130;InbreedingCoeff=0.7723;MQ=44.26;MQ0=29;MQRankSum=-14.523;QD=27.56;ReadPosRankSum=-2.009;VQSLOD=1.5951;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,144,2372	1/1:1,1:2:5.98:96,6,0	0/0:48,0:8:11.79:0,12,135	0/0:47,0:8:11.49:0,11,136	1/1:2,0:2:2.50:9,2,0	1/1:7,6:13:16.91:320,17,0	0/0:45,0:45:99:0,123,2132	0/0:58,0:54:99:0,108,1732	1/1:13,12:22:45.91:988,46,0	1/1:5,3:8:20.86:364,21,0	1/1:2,3:5:10.90:110,11,0	1/1:10,8:16:43.48:712,43,0	1/1:13,6:17:17.72:539,18,0	1/1:14,6:18:31.77:472,32,0	1/1:16,13:28:40.43:700,40,0	1/1:9,4:11:24.01:467,24,0	0/1:3,3:6:29.40:253,0,29	0/0:34,0:35:74.91:0,75,1521	0/0:18,0:13:32.16:0,32,473	0/0:33,0:33:81.24:0,81,1348	0/0:152,0:144:99:0,214,4172	1/1:3,2:5:9.98:36,10,0	1/1:3,1:4:2.37:8,2,0	0/1:14,9:23:13.64:164,0,14	1/1:4,5:9:17.35:329,17,0	0/0:33,0:32:88.18:0,88,1510	0/0:31,0:29:75.21:0,75,1214	0/0:15,0:15:40.93:0,41,607
chr10	83085598	.	TTA	T	399.64	PASS	AB=0.836;AC=18;AF=0.321;AN=56;BaseQRankSum=11.109;DP=710;FS=6.648;HRun=0;HaplotypeScore=202.2335;InbreedingCoeff=0.1170;MQ=49.12;MQ0=27;MQRankSum=-9.407;QD=2.39;ReadPosRankSum=-7.549;VQSLOD=-0.4032;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,151,2881	0/0:1,0:1:2.88:0,3,15	0/0:43,2:12:29.24:0,29,521	0/1:47,2:12:6.33:6,0,116	1/1:1,1:2:2.04:6,2,0	0/0:6,0:6:7.69:0,8,47	0/0:54,0:54:99:0,159,2855	0/0:56,0:49:99:0,132,2485	0/1:16,2:16:61.75:95,0,62	0/1:6,1:6:16.41:54,0,16	0/1:3,2:5:1.60:9,0,2	1/1:9,3:12:1.87:138,2,0	0/1:7,3:10:4.48:132,0,4	0/1:7,3:10:3:3,0,18	0/1:15,4:18:7.35:7,0,55	0/1:4,1:5:19.91:20,0,33	0/1:7,1:8:13.15:57,0,13	0/0:35,0:36:45.26:0,45,1748	0/0:28,0:21:59.84:0,60,1069	0/0:33,0:33:95.35:0,95,1765	0/0:143,0:138:99:0,296,5875	1/1:2,0:2:3.63:11,4,0	1/1:1,1:2:0.47:1,0,0	0/1:14,4:18:1.75:2,0,24	0/0:5,3:8:11.25:0,11,54	0/0:39,0:36:38.60:0,39,1841	0/0:29,0:28:80.06:0,80,1440	0/0:12,0:12:16.50:0,17,573
chr10	83085628	.	TGTGAGAGTGTGAGTGTGTGTGA	T	6045.72	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=8.136;DP=635;FS=25.473;HRun=0;HaplotypeScore=305.6022;InbreedingCoeff=0.8059;MQ=51.65;MQ0=28;MQRankSum=-11.168;QD=36.42;ReadPosRankSum=-9.130;VQSLOD=1.1983;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,6601	1/1:1,0:1:3.01:115,3,0	0/0:33,0:6:16.87:0,17,322	0/0:49,0:15:25:0,25,472	1/1:2,9:11:6.02:173,6,0	1/1:3,0:3:6.02:230,6,0	0/0:48,0:47:99:0,126,5531	0/0:43,0:38:99:0,108,3489	1/1:5,0:5:7.24:337,7,0	1/1:10,0:8:21.07:693,21,0	1/1:4,7:11:9.03:225,9,0	1/1:6,0:6:11.87:242,12,0	1/1:8,0:8:21.07:728,21,0	1/1:5,0:5:15.05:490,15,0	1/1:9,0:8:14.92:373,15,0	1/1:8,0:7:18.06:569,18,0	1/1:9,0:9:16.41:478,16,0	0/1:35,0:35:36.98:37,0,4167	0/0:28,0:20:60.19:0,60,2392	0/0:29,0:29:59.47:0,59,2886	0/0:125,0:122:99:0,254,15290	1/1:3,9:12:8.82:219,9,0	1/1:3,9:11:6.01:199,6,0	1/1:12,0:12:11.92:252,12,0	1/1:9,0:9:14.14:686,14,0	0/0:39,0:37:99:0,102,5758	0/0:21,0:21:57.10:0,57,2347	0/0:6,0:6:12.04:0,12,673
chr10	83085630	.	TGA	T	643.40	PASS	AB=0.860;AC=28;AF=0.500;AN=56;BaseQRankSum=10.236;DP=631;FS=11.837;HRun=0;HaplotypeScore=136.1690;InbreedingCoeff=0.5489;MQ=51.61;MQ0=28;MQRankSum=-9.404;QD=4.91;ReadPosRankSum=-7.293;VQSLOD=-0.7532;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,128,2174	1/1:0,1:1:3.01:31,3,0	0/0:33,0:6:14.96:0,15,200	0/0:51,0:15:24.26:0,24,295	0/1:10,2:12:10.16:29,0,10	1/1:3,0:3:5.95:41,6,0	0/0:47,0:46:99:0,120,2062	0/0:41,0:37:99:0,105,1674	0/1:5,0:5:11.81:13,0,12	0/1:8,2:8:2.79:64,0,3	1/1:8,3:10:6.57:30,7,0	1/1:4,2:6:0.45:1,0,0	1/1:3,5:8:0.52:152,1,0	1/1:2,3:5:8.85:70,9,0	1/1:5,4:8:11.52:68,12,0	1/1:5,2:6:6.01:58,6,0	0/1:6,3:9:8.33:81,0,8	0/0:35,0:35:90.04:0,90,1524	0/0:29,0:21:60.14:0,60,939	0/0:25,1:26:56.60:0,57,947	0/0:123,0:121:99:0,283,4871	1/1:9,3:12:5.79:43,6,0	1/1:10,2:11:5.84:39,6,0	1/1:9,2:12:3:25,3,0	1/1:7,2:9:7.07:82,7,0	0/0:39,0:37:99:0,102,1735	0/0:21,0:21:47.54:0,48,787	0/0:6,0:6:12.04:0,12,213
chr10	83085646	.	TGTGA	T	1448.66	PASS	AB=0.916;AC=29;AF=0.518;AN=56;BaseQRankSum=12.314;DP=718;FS=0.000;HRun=0;HaplotypeScore=175.2939;InbreedingCoeff=0.5286;MQ=47.45;MQ0=27;MQRankSum=-9.009;QD=6.38;ReadPosRankSum=-5.654;VQSLOD=-0.0403;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,136,3421	1/1:7,0:7:6.97:57,7,0	1/1:19,0:2:2.04:6,2,0	0/0:45,0:10:21.41:0,21,374	0/1:12,0:12:6.98:7,0,29	1/1:4,0:4:8.96:80,9,0	0/0:43,0:42:99:0,114,2809	0/0:49,0:44:99:0,123,2744	0/1:7,2:9:46.70:78,0,47	0/1:22,3:22:45.85:413,0,46	1/1:10,0:9:8.77:52,9,0	1/1:12,0:12:8.02:74,8,0	0/1:11,2:13:13.58:167,0,14	1/1:11,2:13:12.71:96,13,0	1/1:14,1:14:16.86:117,17,0	1/1:16,1:16:11.26:131,11,0	0/1:13,0:13:24.62:72,0,25	0/0:35,0:35:90.08:0,90,2033	0/0:26,0:18:50.71:0,51,1139	0/0:26,0:26:53.49:0,53,1441	0/0:139,0:134:99:0,293,7789	1/1:13,0:13:6.71:36,7,0	1/1:12,0:11:5.84:35,6,0	1/1:14,0:14:2.26:8,2,0	1/1:18,1:19:11.34:218,11,0	0/0:46,0:43:99:0,129,3228	0/0:20,0:20:53.56:0,54,1138	0/0:10,0:10:30.10:0,30,682
chr10	83085650	.	A	AGAGTGT	7212.36	PASS	AB=0.857;AC=31;AF=0.554;AN=56;BaseQRankSum=11.002;DP=756;FS=3.436;HRun=0;HaplotypeScore=190.5737;InbreedingCoeff=0.8091;MQ=46.51;MQ0=30;MQRankSum=-9.718;QD=30.69;ReadPosRankSum=-4.404;VQSLOD=3.8330;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,129,3146	1/1:6,1:7:12.02:284,12,0	0/0:23,0:1:0:0,0,0	0/0:42,0:10:17.82:0,18,310	0/1:10,2:12:9.06:153,0,9	1/1:5,0:5:12.03:274,12,0	0/0:44,0:43:99:0,120,2624	0/0:49,0:44:99:0,123,2601	1/1:12,0:12:0.08:294,0,0	1/1:29,2:28:52.62:1401,53,0	1/1:7,3:9:9.03:199,9,0	1/1:12,1:14:17.41:253,17,0	1/1:9,5:14:30.98:803,31,0	1/1:12,3:15:21.07:518,21,0	1/1:12,4:15:20.94:453,21,0	1/1:20,2:21:13.53:703,14,0	1/1:10,3:13:10.86:507,11,0	0/0:37,0:37:96.10:0,96,1852	0/0:25,0:19:57.07:0,57,1096	0/0:25,0:25:54.19:0,54,1317	0/0:144,0:139:99:0,315,7472	1/1:10,3:13:8.84:183,9,0	1/1:10,2:11:6.02:185,6,0	1/1:18,2:20:5.79:117,6,0	1/1:17,2:19:25.06:887,25,0	0/0:47,0:44:99:0,130,2882	0/0:20,0:20:53.99:0,54,1023	0/0:10,0:10:30.08:0,30,663
chr10	83086205	.	G	GCTGA	17943.15	PASS	AB=0.957;AC=33;AF=0.589;AN=56;BaseQRankSum=-12.965;DP=553;FS=6.569;HRun=0;HaplotypeScore=90.1817;InbreedingCoeff=0.9237;MQ=77.29;MQ0=0;MQRankSum=-6.137;QD=56.96;ReadPosRankSum=5.161;VQSLOD=5.9509;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.24:0,72,1348	1/1:4,8:14:27.01:720,27,0	0/0:14,0:14:36.07:0,36,554	0/0:13,0:13:36.07:0,36,580	1/1:1,8:10:21.07:570,21,0	1/1:2,10:13:36.12:961,36,0	0/0:31,0:31:93.17:0,93,1615	0/0:28,0:28:78.15:0,78,1236	1/1:1,16:19:42.13:1133,42,0	1/1:2,12:15:39.12:1008,39,0	1/1:5,13:18:33.11:862,33,0	1/1:1,17:19:39.13:1054,39,0	1/1:0,19:19:54.19:1470,54,0	1/1:2,16:21:36.12:974,36,0	1/1:1,17:18:51.18:1380,51,0	1/1:0,22:26:57.20:1538,57,0	1/1:2,31:36:87.30:2360,87,0	0/0:32,0:32:96.32:0,96,1819	0/0:12,0:12:36.12:0,36,691	0/0:11,0:11:27.08:0,27,484	0/0:47,0:47:99:0,132,2373	1/1:3,16:21:42.14:1145,42,0	1/1:2,7:10:24.08:642,24,0	1/1:0,20:23:54.19:1468,54,0	1/1:2,8:11:24.08:633,24,0	0/1:21,1:22:24.62:25,0,918	0/0:16,0:16:48.16:0,48,913	0/0:6,0:6:18.03:0,18,312
chr10	83086915	.	GAAGA	G	4928.78	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=11.738;DP=468;FS=7.484;HRun=0;HaplotypeScore=123.1100;InbreedingCoeff=0.7139;MQ=46.13;MQ0=10;MQRankSum=-6.658;QD=19.25;ReadPosRankSum=4.058;VQSLOD=3.9205;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:4.47:0,4,1008	1/1:5,0:5:12.39:108,12,0	0/0:32,0:13:39.11:0,39,684	0/0:33,0:13:24.08:0,24,399	1/1:13,0:13:10.29:240,10,0	1/1:17,0:13:28.96:294,29,0	0/0:8,0:7:15.05:0,15,380	0/0:20,0:19:48.15:0,48,860	1/1:11,0:10:3.96:183,4,0	1/1:21,0:21:52.77:557,53,0	1/1:14,0:14:30.72:314,31,0	0/1:11,0:11:3.68:158,0,4	1/1:13,0:13:26.84:293,27,0	1/1:11,0:11:6.35:207,6,0	1/1:14,0:14:29.68:343,30,0	1/1:19,0:18:34.80:384,35,0	1/1:10,0:9:23.72:235,24,0	0/0:21,0:20:36.77:0,37,755	0/0:10,0:9:20.98:0,21,391	0/0:20,0:20:60.20:0,60,1362	1/1:6,9:13:12.71:171,13,0	1/1:19,0:19:37.15:387,37,0	1/1:24,0:24:58.88:696,59,0	0/1:9,0:7:25.73:75,0,26	1/1:10,0:10:25.85:276,26,0	0/1:20,0:18:7.12:7,0,383	0/0:31,0:30:84.27:0,84,1819	0/0:16,0:14:2.64:0,3,113
chr10	83086918	.	GA	G	5148	PASS	AB=0.659;AC=27;AF=0.482;AN=56;BaseQRankSum=9.020;DP=462;FS=1.823;HRun=3;HaplotypeScore=100.9120;InbreedingCoeff=0.4888;MQ=45.35;MQ0=11;MQRankSum=-5.819;QD=22.98;ReadPosRankSum=5.344;VQSLOD=4.3242;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,2:21:3.22:0,3,561	0/1:2,3:5:21.78:96,0,22	0/0:34,0:14:42.12:0,42,557	0/0:33,0:14:30.09:0,30,400	0/1:3,10:12:34.16:224,0,34	1/1:1,16:13:30.09:371,30,0	0/0:8,0:7:15.05:0,15,216	0/0:22,0:20:48.62:0,49,674	0/1:4,5:8:10.98:165,0,11	1/1:4,16:20:44.74:588,45,0	1/1:3,11:14:15.56:337,16,0	0/1:4,7:11:32.74:192,0,33	1/1:0,12:12:27.08:333,27,0	0/1:1,9:10:5.77:201,0,6	1/1:1,11:12:30.09:370,30,0	1/1:1,16:16:21.18:419,21,0	1/1:1,8:8:24.07:281,24,0	0/0:20,0:19:39.13:0,39,556	0/0:11,0:8:21.06:0,21,280	0/0:20,0:20:60.20:0,60,863	0/1:15,0:13:21.85:22,0,126	1/1:3,15:17:22.15:420,22,0	1/1:0,22:22:57.55:727,58,0	0/1:4,5:7:56.79:79,0,57	1/1:4,7:11:25.67:323,26,0	0/0:20,0:17:14.32:0,14,589	0/0:30,0:29:84.26:0,84,1183	0/0:16,0:14:24.08:0,24,331
chr10	83087007	.	AAG	A	324.65	PASS	AB=0.923;AC=11;AF=0.212;AN=52;BaseQRankSum=4.968;DP=670;FS=0.930;HRun=0;HaplotypeScore=105.8789;InbreedingCoeff=-0.1434;MQ=19.07;MQ0=313;MQRankSum=-0.685;QD=1.52;ReadPosRankSum=-5.096;VQSLOD=0.4198;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,1:21:32.45:0,32,352	0/0:1,0:1:3.01:0,3,48	./.	./.	1/1:18,2:2:3.01:41,3,0	0/0:16,0:5:5.85:0,6,71	0/0:26,0:5:6.02:0,6,73	0/0:50,3:22:52.89:0,53,655	0/1:13,1:6:58.63:59,0,141	0/1:34,2:14:40.85:41,0,366	0/0:15,2:6:4.79:0,5,72	0/0:17,0:5:9.03:0,9,123	0/0:24,0:7:21.04:0,21,246	0/0:29,0:2:3.01:0,3,43	0/1:10,2:4:59.60:60,0,62	0/1:11,1:5:56.49:56,0,91	0/1:29,1:6:24.74:25,0,100	0/0:29,0:13:11.43:0,11,175	0/0:32,0:13:36.07:0,36,431	0/0:27,0:19:46.68:0,47,566	0/0:20,0:6:18.06:0,18,222	0/0:36,0:4:5.74:0,6,18	0/1:16,2:5:43.87:64,0,44	0/1:28,3:9:46.22:46,0,93	0/1:11,2:3:18.10:66,0,18	0/0:37,0:16:44.90:0,45,554	0/0:49,0:43:99:0,108,1290	0/1:28,0:8:1.25:1,0,11
chr10	83087017	.	A	AG	1040.37	PASS	AB=0.983;AC=14;AF=0.280;AN=50;BaseQRankSum=0.614;DP=616;FS=11.990;HRun=0;HaplotypeScore=103.5052;InbreedingCoeff=-0.2469;MQ=19.50;MQ0=284;MQRankSum=0.074;QD=3.12;ReadPosRankSum=-2.999;VQSLOD=1.6631;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:23:30.22:30,0,173	./.	./.	./.	1/1:19,0:1:2.60:10,3,0	0/0:13,0:2:2.97:0,3,20	0/1:23,0:6:36.97:37,0,64	0/0:46,0:24:19.83:0,20,575	0/1:14,0:8:18.14:18,0,67	0/0:32,0:9:12.92:0,13,69	0/1:14,0:4:4.85:5,0,6	0/0:17,0:5:2.62:0,3,15	0/0:23,0:8:16.08:0,16,111	0/1:28,0:3:2.46:2,0,6	0/0:12,0:4:7.03:0,7,38	0/0:13,0:7:11.89:0,12,88	0/0:28,0:6:11.21:0,11,95	0/1:27,1:13:67.14:67,0,98	0/1:24,0:15:99:199,0,269	0/1:27,4:23:99:296,0,271	0/1:17,1:5:70.26:70,0,78	0/0:30,0:3:2.69:0,3,38	0/0:15,0:3:7.01:0,7,34	0/0:32,0:10:7.35:0,7,34	0/1:13,0:4:17.71:26,0,18	0/1:34,0:12:1.22:1,0,127	0/1:44,0:39:99:410,0,632	0/0:22,0:4:3.01:0,3,37
chr10	83087024	.	AAG	A	565.02	PASS	AB=0.963;AC=15;AF=0.300;AN=50;BaseQRankSum=7.333;DP=601;FS=1.675;HRun=0;HaplotypeScore=109.4636;InbreedingCoeff=-0.1282;MQ=20.69;MQ0=270;MQRankSum=-0.473;QD=2.31;ReadPosRankSum=-1.475;VQSLOD=2.0931;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:25:25.78:0,26,724	./.	./.	./.	1/1:14,2:1:2.97:20,3,0	0/0:13,0:2:0.89:0,1,2	0/0:24,0:9:18.04:0,18,265	0/0:41,1:20:50.88:0,51,602	0/1:11,2:8:99:110,0,129	0/1:29,1:9:63.06:117,0,63	0/1:13,1:5:44.16:50,0,44	0/1:15,0:3:21.85:22,0,47	0/1:21,0:7:13.55:14,0,141	0/1:26,0:2:11.01:23,0,11	0/1:12,0:4:41.86:51,0,42	0/1:11,1:6:54.90:89,0,55	0/1:28,0:6:23.60:24,0,80	0/0:27,0:13:15.04:0,15,171	0/0:25,0:16:48.11:0,48,616	0/0:30,0:22:54.16:0,54,693	0/0:17,0:6:14.91:0,15,160	0/0:26,0:1:3.01:0,3,34	0/1:14,1:3:14.92:66,0,15	0/1:30,1:10:28.50:29,0,51	1/1:10,2:4:9:99,9,0	0/0:40,0:10:30.10:0,30,571	0/0:45,0:40:99:0,105,1465	0/0:25,0:4:3.01:0,3,30
chr10	83087047	.	GAA	G	1602.44	PASS	AB=0.871;AC=23;AF=0.460;AN=50;BaseQRankSum=1.474;DP=414;FS=3.328;HRun=4;HaplotypeScore=131.8710;InbreedingCoeff=-0.4177;MQ=29.97;MQ0=89;MQRankSum=-1.362;QD=5.06;ReadPosRankSum=2.529;VQSLOD=-0.0060;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,1:30:26.15:26,0,854	./.	./.	./.	1/1:7,3:1:2.99:23,3,0	0/1:9,0:7:1.41:1,0,69	0/0:17,0:15:36.12:0,36,505	0/0:18,0:3:0.26:0,0,1	0/1:10,4:11:99:157,0,121	0/1:14,3:11:99:131,0,172	0/1:8,2:7:55.96:105,0,56	0/1:6,1:4:33.24:33,0,59	0/1:9,2:8:61.65:62,0,167	0/1:11,1:8:23.16:23,0,177	0/1:11,2:5:64.31:75,0,64	0/1:9,3:5:20.79:122,0,21	0/1:12,1:7:46.76:53,0,47	1/1:11,2:9:11.16:61,11,0	0/1:17,0:8:17.13:17,0,18	0/1:22,2:23:10.46:118,0,10	0/0:13,1:7:13.96:0,14,118	0/0:6,0:2:2.96:0,3,19	0/1:4,2:4:29.64:76,0,30	0/1:11,3:9:99:109,0,117	0/1:13,3:12:91.77:92,0,234	0/0:28,4:11:17.19:0,17,351	0/1:39,7:44:96.61:421,0,97	1/1:16,0:8:10.41:44,10,0
chr10	83087049	.	A	AG	1852.62	PASS	AB=0.964;AC=26;AF=0.520;AN=50;BaseQRankSum=1.138;DP=406;FS=5.979;HRun=0;HaplotypeScore=131.7987;InbreedingCoeff=-0.4107;MQ=30.53;MQ0=76;MQRankSum=-1.576;QD=5.43;ReadPosRankSum=1.870;VQSLOD=3.1732;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:29:28.09:28,0,655	./.	./.	./.	1/1:10,0:1:2.99:23,3,0	0/1:12,0:8:13.53:14,0,44	0/0:18,0:15:34.66:0,35,451	0/0:18,0:3:0.24:0,0,1	0/1:11,0:11:99:167,0,124	0/1:15,0:11:99:129,0,166	0/1:11,1:9:41.91:126,0,42	0/1:6,0:4:33.14:33,0,62	0/1:11,0:8:58.35:58,0,148	0/1:11,0:8:25.89:26,0,165	0/1:14,0:6:57.78:58,0,72	0/1:12,0:6:21.38:134,0,21	0/1:12,1:7:42.39:72,0,42	1/1:12,0:9:14.61:92,15,0	1/1:16,0:8:9.92:37,10,0	1/1:24,0:23:8.51:136,9,0	0/0:13,1:8:2.22:0,2,60	0/0:5,0:2:2.84:0,3,14	0/1:7,0:5:39.16:69,0,39	0/1:11,3:9:99:108,0,110	0/1:16,0:12:93.95:94,0,220	0/1:34,0:13:8.64:9,0,306	0/1:36,5:41:89.70:541,0,90	1/1:14,0:8:10.42:45,10,0
chr10	83087066	.	AGAG	A	908.63	PASS	AB=0.969;AC=24;AF=0.462;AN=52;BaseQRankSum=2.376;DP=435;FS=1.073;HRun=0;HaplotypeScore=166.6938;InbreedingCoeff=-0.5075;MQ=34.62;MQ0=30;MQRankSum=-6.563;QD=2.63;ReadPosRankSum=-6.065;VQSLOD=0.6615;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:32:80.89:0,81,1398	1/1:3,0:3:8.90:60,9,0	./.	./.	1/1:8,0:5:2.97:20,3,0	0/1:16,0:13:58.93:59,0,65	0/0:22,0:21:41.78:0,42,856	0/1:35,0:16:17.84:18,0,263	0/1:12,0:12:20.56:21,0,103	0/1:15,0:12:22.60:23,0,103	0/1:14,0:14:23.70:53,0,24	0/1:6,0:5:2.04:58,0,2	0/0:8,0:7:17.39:0,17,101	0/1:13,0:13:70:70,0,72	0/1:10,0:9:28.10:75,0,28	0/1:14,0:12:41.04:87,0,41	0/1:14,0:12:30.84:74,0,31	0/1:11,2:11:23:23,0,122	0/1:21,0:14:78.93:79,0,148	0/1:24,2:26:46.23:46,0,398	0/0:15,0:11:25.59:0,26,363	0/1:7,0:4:10.20:14,0,10	0/1:8,0:8:25.90:53,0,26	0/1:11,0:10:5.55:6,0,64	0/1:17,0:17:29.13:29,0,146	0/1:18,13:11:53.92:54,0,147	0/1:37,0:36:99:137,0,570	0/1:12,2:8:3.87:4,0,93
chr10	83087078	.	AGAG	A	736.79	PASS	AB=0.978;AC=20;AF=0.385;AN=52;BaseQRankSum=9.894;DP=482;FS=0.945;HRun=0;HaplotypeScore=191.3705;InbreedingCoeff=0.1426;MQ=36.36;MQ0=30;MQRankSum=-9.901;QD=3.70;ReadPosRankSum=-1.809;VQSLOD=2.5714;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:69.40:0,69,1838	1/1:4,0:4:10.58:43,11,0	./.	./.	1/1:8,1:6:2.74:12,3,0	0/1:19,0:15:5.84:81,0,6	0/0:26,0:25:69.13:0,69,1377	0/0:41,0:21:57.19:0,57,1148	0/0:11,0:11:3.29:0,3,68	0/1:19,0:16:34.66:35,0,43	0/1:12,1:13:19.51:81,0,20	1/1:8,0:7:1.74:49,2,0	0/1:13,0:12:27.14:44,0,27	1/1:14,0:14:4.29:106,4,0	0/1:11,0:10:9.30:54,0,9	0/1:19,0:17:36.03:77,0,36	0/1:13,1:12:26.31:80,0,26	0/0:15,0:13:31.30:0,31,571	0/0:21,0:17:50.34:0,50,901	0/0:29,0:29:81.17:0,81,1640	0/0:16,0:14:36.12:0,36,755	1/1:10,0:6:7.87:31,8,0	0/1:12,0:12:6.58:53,0,7	0/1:11,1:11:43.34:43,0,74	0/1:21,0:21:0.21:110,0,0	0/0:29,0:11:32.54:0,33,523	0/0:38,0:36:99:0,99,1936	0/0:16,0:11:24.08:0,24,460
chr10	83087084	.	AGAG	A	5320.79	PASS	AB=0.668;AC=28;AF=0.538;AN=52;BaseQRankSum=9.902;DP=488;FS=0.000;HRun=0;HaplotypeScore=173.5564;InbreedingCoeff=0.5955;MQ=36.97;MQ0=29;MQRankSum=-10.652;QD=25.46;ReadPosRankSum=0.537;VQSLOD=4.7639;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:94.09:0,94,1819	1/1:0,4:4:12.04:195,12,0	./.	./.	1/1:5,4:7:5.44:67,5,0	1/1:2,17:15:35.86:535,36,0	0/0:26,0:25:51.20:0,51,1126	0/0:46,0:24:66.09:0,66,1012	0/1:6,3:9:24.48:122,0,24	0/1:10,10:16:19.01:413,0,19	1/1:6,8:14:5.83:270,6,0	1/1:4,5:8:13.60:266,14,0	1/1:3,9:11:7.65:312,8,0	1/1:2,12:14:32.83:576,33,0	0/1:2,9:10:3.97:349,0,4	1/1:4,15:17:4.63:561,5,0	1/1:6,8:12:13.19:285,13,0	0/0:16,0:14:21.68:0,22,518	0/0:24,0:20:46.01:0,46,750	0/0:31,0:31:81.12:0,81,1432	0/0:14,0:13:36.12:0,36,707	1/1:8,3:8:9.03:142,9,0	1/1:3,9:12:2.55:328,3,0	0/1:7,5:11:70.08:159,0,70	1/1:3,17:20:16.82:739,17,0	0/0:27,0:10:10.86:0,11,378	0/0:41,0:39:99:0,102,1714	0/0:15,0:10:23.96:0,24,324
chr10	83087114	.	AGAG	A	7625.02	PASS	AB=0.923;AC=31;AF=0.554;AN=56;BaseQRankSum=15.476;DP=580;FS=1.141;HRun=0;HaplotypeScore=155.2894;InbreedingCoeff=0.9058;MQ=46.51;MQ0=26;MQRankSum=-11.432;QD=29.10;ReadPosRankSum=5.444;VQSLOD=5.2260;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:99:0,117,2334	1/1:9,0:9:26.98:296,27,0	0/0:9,1:8:17.86:0,18,246	0/0:9,0:4:3.94:0,4,111	1/1:7,1:7:15.34:127,15,0	1/1:24,1:21:54.54:743,55,0	0/0:27,0:26:72.20:0,72,1423	0/0:40,0:21:54.17:0,54,928	1/1:12,1:13:13.31:322,13,0	1/1:21,1:21:38.47:711,38,0	1/1:16,1:16:42.68:469,43,0	1/1:13,0:12:29.29:336,29,0	1/1:13,2:14:29.94:442,30,0	1/1:17,0:17:43.28:616,43,0	1/1:12,1:13:35.98:478,36,0	1/1:25,3:26:53.98:926,54,0	1/1:19,0:17:32.49:349,32,0	0/0:19,0:18:47.95:0,48,883	0/0:28,0:19:54.14:0,54,1008	0/0:33,0:31:87.30:0,87,1901	0/0:27,0:26:72.13:0,72,1447	1/1:5,12:15:18.06:294,18,0	1/1:11,0:11:32.83:403,33,0	0/1:11,1:12:8.96:271,0,9	1/1:23,0:23:63.75:842,64,0	0/0:25,0:19:35.10:0,35,434	0/0:39,0:38:99:0,111,2350	0/0:19,0:14:18.42:0,18,337
chr10	83087892	.	C	CCT	14224.40	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=4.519;DP=667;FS=11.964;HRun=0;HaplotypeScore=94.7595;InbreedingCoeff=0.9893;MQ=68.80;MQ0=5;MQRankSum=-1.738;QD=39.84;ReadPosRankSum=2.574;VQSLOD=6.4928;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.18:0,87,1256	1/1:0,10:10:18:340,18,0	0/0:32,0:15:34.25:0,34,414	0/0:33,0:23:41.11:0,41,563	1/1:1,20:22:56.90:902,57,0	1/1:1,19:23:45.15:863,45,0	0/0:19,0:19:57.15:0,57,824	0/0:31,0:32:87.16:0,87,1232	1/1:1,16:17:33.06:615,33,0	1/1:1,23:25:75.17:1326,75,0	1/1:2,18:20:57:1004,57,0	1/1:1,23:24:54.14:979,54,0	1/1:0,14:15:30.10:592,30,0	1/1:0,15:17:39.13:759,39,0	1/1:2,23:26:59.99:1106,60,0	1/1:0,21:21:51.18:1026,51,0	1/1:1,36:38:66.18:1306,66,0	0/0:28,0:28:78.09:0,78,1039	0/0:32,0:32:94.94:0,95,1339	0/0:20,0:20:57.15:0,57,849	0/0:17,0:17:47.80:0,48,719	1/1:1,25:27:60.01:1036,60,0	1/1:1,15:17:26.76:519,27,0	1/1:2,27:30:37.36:887,37,0	1/1:1,21:23:48.16:966,48,0	0/0:34,0:34:96.28:0,96,1424	0/0:25,0:27:81.23:0,81,1194	0/0:4,0:4:8.41:0,8,132
chr10	83090089	.	C	CCAGACTCAGCTTGGATTCCGTCC	30508.59	PASS	AB=0.757;AC=52;AF=0.963;AN=54;BaseQRankSum=0.215;DP=240;FS=23.118;HRun=0;HaplotypeScore=324.7827;InbreedingCoeff=-0.0581;MQ=68.32;MQ0=0;MQRankSum=-2.376;QD=127.65;ReadPosRankSum=1.932;VQSLOD=3.4624;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:30.10:2334,30,0	./.	0/1:6,0:10:12.08:1039,0,12	0/1:3,1:4:5.51:439,0,6	1/1:7,0:7:15.05:1321,15,0	1/1:9,0:9:12.04:792,12,0	1/1:11,0:11:30.10:1870,30,0	1/1:5,0:5:15.05:539,15,0	1/1:9,0:9:12.04:806,12,0	1/1:8,0:8:15.05:861,15,0	1/1:5,0:5:12.04:1000,12,0	1/1:11,0:11:9.03:775,9,0	1/1:14,0:14:24.04:1459,24,0	1/1:6,0:6:9.03:581,9,0	1/1:10,0:10:27.05:1777,27,0	1/1:11,0:11:30.06:1363,30,0	1/1:6,0:6:12.04:1092,12,0	1/1:8,0:8:15.05:1200,15,0	1/1:9,0:9:24.08:1494,24,0	1/1:7,0:7:15.05:956,15,0	1/1:12,0:12:25.90:1804,26,0	1/1:6,0:6:11.87:595,12,0	1/1:8,0:8:6.02:463,6,0	1/1:8,0:8:18.06:1159,18,0	1/1:11,0:11:21.07:1548,21,0	1/1:14,0:14:33.11:1663,33,0	1/1:13,0:13:26.17:1251,26,0	1/1:1,0:1:3.01:326,3,0
chr10	83091959	.	AGGAT	A	9456.10	PASS	AB=0.952;AC=37;AF=0.685;AN=54;BaseQRankSum=3.769;DP=907;FS=4.472;HRun=0;HaplotypeScore=160.9838;InbreedingCoeff=0.8604;MQ=57.41;MQ0=9;MQRankSum=1.849;QD=15.73;ReadPosRankSum=0.762;VQSLOD=4.5753;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:35:42.14:0,42,752	1/1:4,5:9:9.03:142,9,0	1/1:33,0:10:3.28:9,3,0	./.	1/1:8,16:24:30.09:439,30,0	1/1:7,11:17:33.11:520,33,0	0/0:22,0:43:22.87:0,23,326	1/1:33,0:32:21.02:220,21,0	1/1:16,29:45:60.07:945,60,0	1/1:30,20:49:60.16:839,60,0	1/1:9,10:19:18.06:283,18,0	1/1:14,12:26:26.72:424,27,0	1/1:15,16:31:30.10:471,30,0	1/1:19,25:44:63.21:992,63,0	1/1:16,23:39:42.13:642,42,0	1/1:9,25:34:36.10:567,36,0	1/1:18,14:32:45.61:750,46,0	0/0:32,0:32:46.64:0,47,1068	0/1:19,1:20:26.19:26,0,357	0/0:18,0:18:36.11:0,36,785	0/0:32,0:56:40.17:0,40,568	1/1:19,20:39:26.14:554,26,0	1/1:21,17:38:30.57:473,31,0	1/1:30,13:43:54.13:782,54,0	1/1:9,13:23:23.93:378,24,0	0/0:45,0:45:87.27:0,87,1911	0/0:28,0:28:51.13:0,51,1027	0/0:10,0:10:6.02:0,6,143
chr10	83100950	.	CCTCCTTCCCTCCCTCT	C	6662.07	PASS	AB=1.000;AC=49;AF=0.907;AN=54;BaseQRankSum=5.749;DP=556;FS=0.668;HRun=0;HaplotypeScore=200.3668;InbreedingCoeff=0.5435;MQ=64.27;MQ0=6;MQRankSum=-1.355;QD=14.14;ReadPosRankSum=1.637;VQSLOD=3.9188;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:84.18:0,84,3030	1/1:2,4:6:3.01:58,3,0	./.	0/1:14,0:9:0:0,0,0	1/1:7,13:20:21.02:297,21,0	1/1:14,0:14:21:286,21,0	0/0:25,0:25:44.84:0,45,1170	1/1:26,0:24:12.01:109,12,0	1/1:8,18:26:9.03:258,9,0	1/1:11,10:20:24.05:411,24,0	1/1:4,7:11:14.93:239,15,0	1/1:8,13:21:12.04:493,12,0	1/1:11,14:25:8.63:361,9,0	1/1:6,13:19:9.03:364,9,0	1/1:6,18:24:2.75:126,3,0	1/1:12,16:28:9.03:390,9,0	1/1:16,0:16:9.03:197,9,0	1/1:12,0:11:15.01:249,15,0	1/1:9,1:10:3.01:131,3,0	1/1:5,9:14:14.85:138,15,0	1/1:26,0:26:29.94:299,30,0	1/1:9,10:19:3.01:40,3,0	1/1:14,0:14:17.96:223,18,0	1/1:14,16:30:11.90:286,12,0	1/1:16,0:16:24:332,24,0	1/1:6,17:23:41.98:913,42,0	1/1:4,13:17:9.88:330,10,0	1/1:13,6:19:3.01:131,3,0
chr10	83101056	.	TCTTC	T	503.74	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.482;DP=751;FS=5.578;HRun=0;HaplotypeScore=116.3886;InbreedingCoeff=0.9799;MQ=59.04;MQ0=13;MQRankSum=0.587;QD=17.99;ReadPosRankSum=1.109;VQSLOD=3.1557;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:94.56:0,95,2122	0/0:8,0:8:24.08:0,24,567	0/0:64,0:22:35.94:0,36,557	0/0:48,0:17:17.83:0,18,376	0/0:19,0:19:54.15:0,54,1086	0/0:22,0:22:57.18:0,57,1217	0/0:36,0:36:78.17:0,78,1652	0/0:27,0:27:45.12:0,45,965	0/0:30,0:30:75.23:0,75,1650	0/0:30,0:30:69.24:0,69,1586	0/0:12,0:12:33.10:0,33,698	0/0:26,0:26:69.21:0,69,1530	0/0:23,0:23:51.13:0,51,1179	0/0:22,0:22:39.13:0,39,910	0/0:27,0:27:60.17:0,60,1325	0/0:35,0:35:93.29:0,93,1989	0/0:32,0:32:75.24:0,75,1690	0/0:22,0:22:54.18:0,54,1240	0/0:8,0:8:18.06:0,18,359	0/0:15,0:15:27.09:0,27,651	1/1:4,24:28:36.12:599,36,0	0/0:30,0:30:75.21:0,75,1686	0/0:14,0:14:36.12:0,36,803	0/0:37,0:37:75.20:0,75,1634	0/0:24,0:24:51.18:0,51,1184	0/0:33,0:32:87.29:0,87,2023	0/0:20,0:20:38.92:0,39,878	0/0:16,0:16:33.35:0,33,822
chr10	83102917	.	A	AAC	314.21	PASS	AB=0.974;AC=12;AF=0.240;AN=50;BaseQRankSum=-3.568;DP=542;FS=3.221;HRun=0;HaplotypeScore=79.1319;InbreedingCoeff=0.3315;MQ=75.13;MQ0=8;MQRankSum=-1.252;QD=1.65;ReadPosRankSum=-1.309;VQSLOD=1.0851;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:2.83:0,3,14	0/0:4,0:4:3.01:0,3,32	1/1:32,0:25:0.47:1,0,0	./.	0/0:6,0:5:2.99:0,3,23	0/0:16,0:18:5.74:0,6,46	0/0:24,0:30:14.15:0,14,70	1/1:22,0:21:6.02:71,6,0	0/0:11,0:12:11.86:0,12,110	0/0:19,0:19:5.84:0,6,64	0/0:8,0:8:5.91:0,6,64	0/0:18,0:18:6.01:0,6,64	0/0:11,0:11:11.99:0,12,112	0/0:16,0:16:3:0,3,32	0/1:16,1:18:29.42:29,0,96	0/0:16,0:17:14.87:0,15,143	0/0:23,0:24:8.85:0,9,78	0/0:14,0:20:2.60:0,3,14	0/1:9,0:9:11.18:37,0,11	./.	1/1:39,17:57:9.03:132,9,0	0/0:12,0:15:4.66:0,5,19	1/1:9,2:11:3.01:44,3,0	1/1:30,9:41:9.03:133,9,0	0/0:15,0:17:11.85:0,12,102	0/0:15,0:15:1.16:0,1,11	./.	0/0:5,0:6:2.67:0,3,13
chr10	83103972	.	G	GC	1023.25	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.070;DP=623;FS=0.000;HRun=3;HaplotypeScore=60.0046;InbreedingCoeff=0.9657;MQ=83.33;MQ0=1;MQRankSum=-3.346;QD=33.01;ReadPosRankSum=0.377;VQSLOD=3.7198;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,1258	0/0:5,0:5:15.05:0,15,179	0/0:19,0:19:53.17:0,53,595	0/0:18,0:17:35.83:0,36,392	0/0:14,0:14:42.13:0,42,499	0/0:12,0:12:30.09:0,30,352	0/0:34,0:34:99:0,99,1187	0/0:32,0:32:90.26:0,90,1067	0/0:22,0:22:66.20:0,66,792	0/0:25,0:25:75.23:0,75,899	0/0:6,0:6:18.05:0,18,215	0/0:29,0:29:81.25:0,81,966	0/0:23,0:23:63.19:0,63,755	0/0:26,0:26:69.20:0,69,816	0/0:36,0:36:99:0,105,1248	0/0:36,0:36:99:0,108,1295	0/0:26,0:26:78.18:0,78,906	0/0:27,0:27:78.20:0,78,917	0/0:16,0:16:48.14:0,48,565	0/0:6,0:6:18.06:0,18,216	0/0:46,0:46:99:0,132,1525	0/0:11,0:11:33.09:0,33,385	0/0:7,0:7:21.06:0,21,251	0/0:40,0:40:99:0,111,1319	0/0:11,0:11:30.09:0,30,359	1/1:2,15:17:12.26:594,12,0	0/0:27,0:27:72.22:0,72,861	1/1:0,14:14:39.13:546,39,0
chr10	83104260	.	G	GCACA	1501.13	PASS	AB=0.833;AC=14;AF=0.269;AN=52;BaseQRankSum=1.418;DP=588;FS=30.844;HRun=0;HaplotypeScore=103.1156;InbreedingCoeff=0.6232;MQ=52.96;MQ0=15;MQRankSum=-5.703;QD=7.47;ReadPosRankSum=-3.977;VQSLOD=-0.1863;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:26:3.48:53,3,0	0/0:9,0:9:9.03:0,9,141	./.	./.	0/0:16,0:16:11.55:0,12,237	0/0:15,0:22:23.93:0,24,229	1/1:12,20:36:12.04:265,12,0	1/1:26,0:24:27.84:284,28,0	0/0:16,0:15:2.92:0,3,226	0/0:21,0:23:9.97:0,10,229	0/0:13,0:14:23.91:0,24,271	0/0:33,0:30:14.73:0,15,207	0/0:7,0:8:11.92:0,12,126	0/0:11,0:13:18:0,18,216	0/0:12,0:14:24.07:0,24,334	0/0:19,0:20:13.73:0,14,186	0/0:36,0:39:59.57:0,60,908	1/1:19,1:32:15.61:249,16,0	1/1:10,7:16:17.98:269,18,0	0/1:10,10:20:19.25:133,0,19	0/0:36,0:37:1.74:0,2,69	0/0:15,0:15:15.02:0,15,190	0/0:10,0:10:3.01:0,3,47	0/0:39,0:40:15.14:0,15,637	0/0:20,0:21:23.39:0,23,290	0/1:16,0:15:33.04:35,0,33	1/1:11,11:26:25.36:386,25,0	0/0:9,0:10:9.93:0,10,138
chr10	83105794	.	C	CT	450.37	PASS	AB=0.500;AC=40;AF=0.800;AN=50;BaseQRankSum=3.618;DP=101;FS=0.000;HRun=0;HaplotypeScore=118.7917;InbreedingCoeff=0.3728;MQ=45.71;MQ0=0;MQRankSum=-1.666;QD=4.95;ReadPosRankSum=0.287;VQSLOD=3.2641;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:5.14:15,5,0	1/1:0,1:1:2.74:12,3,0	0/0:1,0:1:2.84:0,3,14	./.	0/0:0,2:2:1.92:0,2,6	./.	1/1:0,5:5:3.88:20,4,0	1/1:0,1:1:0.47:1,0,0	1/1:0,9:9:16.25:70,16,0	1/1:0,3:3:7.71:42,8,0	0/1:0,2:2:0.07:0,0,0	1/1:0,11:11:16.35:73,16,0	1/1:0,1:1:2.68:11,3,0	1/1:0,5:5:2.74:12,3,0	1/1:0,6:6:0.87:12,1,0	1/1:0,5:5:5.49:24,5,0	1/1:0,8:8:7.34:27,7,0	1/1:0,2:2:5.91:39,6,0	1/1:0,3:3:8.80:54,9,0	0/0:0,3:3:1.96:0,2,7	./.	1/1:0,2:2:0.47:2,0,0	0/0:0,1:1:2.37:0,2,8	0/1:0,5:4:0.07:1,0,0	1/1:0,5:5:8:32,8,0	1/1:0,2:2:4.77:24,5,0	1/1:0,7:7:7.55:34,8,0	1/1:0,3:3:8.68:47,9,0
chr10	83105796	.	AG	A	272.42	PASS	AB=0.500;AC=38;AF=0.731;AN=52;BaseQRankSum=4.306;DP=101;FS=0.000;HRun=1;HaplotypeScore=119.3516;InbreedingCoeff=0.2932;MQ=45.71;MQ0=0;MQRankSum=-0.290;QD=3.20;ReadPosRankSum=0.178;VQSLOD=-0.2500;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:2.84:10,3,0	1/1:0,1:1:2.04:6,2,0	0/0:1,0:1:3.01:0,3,46	./.	0/0:0,2:2:2.50:0,2,9	./.	0/1:0,5:5:2.63:30,0,3	1/1:0,1:1:2.04:6,2,0	1/1:0,9:9:6.95:32,7,0	1/1:0,3:3:6.43:27,6,0	1/1:0,2:2:2.47:9,2,0	1/1:0,11:11:6.93:38,7,0	1/1:0,1:1:1.82:5,2,0	1/1:0,5:5:2.04:6,2,0	0/1:0,6:6:4.85:13,0,5	1/1:0,5:5:4.07:12,4,0	1/1:0,8:8:6.14:23,6,0	1/1:0,2:2:5.58:27,6,0	1/1:0,3:3:8.48:41,8,0	0/0:0,3:3:2.22:0,2,7	0/0:0,2:1:0:0,0,0	0/0:0,2:2:0.07:0,0,1	1/1:0,1:1:2.04:6,2,0	0/0:0,5:4:2.60:0,3,10	1/1:0,5:5:5.43:15,5,0	1/1:0,2:2:3.22:14,3,0	1/1:0,7:7:8.34:38,8,0	1/1:0,3:3:7.69:29,8,0
chr10	83105800	.	AT	A	1893.92	PASS	AC=44;AF=0.846;AN=52;BaseQRankSum=2.224;DP=101;FS=0.000;HRun=1;HaplotypeScore=113.4849;InbreedingCoeff=0.3411;MQ=45.71;MQ0=0;MQRankSum=-0.540;QD=20.59;ReadPosRankSum=2.330;VQSLOD=3.7931;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:8.37:73,8,0	1/1:0,1:1:3.01:42,3,0	0/0:1,0:1:3.01:0,3,47	./.	0/0:0,2:2:2.50:0,2,9	./.	1/1:0,5:5:13.41:111,13,0	1/1:0,1:1:2.84:14,3,0	1/1:0,9:9:24.94:256,25,0	1/1:0,3:3:9.03:113,9,0	1/1:0,2:2:2.98:40,3,0	1/1:0,11:11:25.55:257,26,0	1/1:0,1:1:3.01:42,3,0	1/1:0,5:5:5.91:58,6,0	1/1:0,6:6:8.57:59,9,0	1/1:0,5:5:13.33:110,13,0	1/1:0,8:8:18.22:147,18,0	1/1:0,2:2:6.02:84,6,0	1/1:0,3:3:9.03:118,9,0	0/0:0,3:3:0:0,0,3	0/0:0,2:1:0:0,0,0	1/1:0,2:2:5.42:26,5,0	1/1:0,1:1:2.04:6,2,0	1/1:0,5:4:2.89:18,3,0	1/1:0,5:5:12.10:129,12,0	1/1:0,2:2:6.01:66,6,0	1/1:0,7:7:9.02:103,9,0	1/1:0,3:3:9.03:125,9,0
chr10	83105832	.	T	TC	4749.06	PASS	AB=0.827;AC=53;AF=0.946;AN=56;BaseQRankSum=1.724;DP=201;FS=19.664;HRun=0;HaplotypeScore=157.8655;InbreedingCoeff=-0.0715;MQ=81.16;MQ0=0;MQRankSum=-3.341;QD=23.63;ReadPosRankSum=3.401;VQSLOD=3.6358;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:13:30.02:298,30,0	0/1:1,3:4:1.23:92,0,1	0/1:7,1:10:26.60:139,0,27	0/1:12,0:11:23.28:130,0,23	1/1:0,4:4:11.87:96,12,0	1/1:1,5:6:18.04:190,18,0	1/1:1,11:12:32.38:300,32,0	1/1:0,5:5:15.04:172,15,0	1/1:2,7:9:19.60:195,20,0	1/1:0,6:6:18.02:198,18,0	1/1:0,3:3:8.98:76,9,0	1/1:0,10:10:25.30:258,25,0	1/1:0,4:4:12.03:123,12,0	1/1:0,8:8:23.42:235,23,0	1/1:0,8:8:24.06:249,24,0	1/1:0,6:6:15.40:139,15,0	1/1:1,9:10:20.22:191,20,0	1/1:1,3:4:9.02:106,9,0	1/1:0,6:6:18.05:218,18,0	1/1:0,4:4:9.91:94,10,0	1/1:2,11:12:21.01:208,21,0	1/1:0,8:8:22.74:186,23,0	1/1:0,1:1:3.01:30,3,0	1/1:2,7:8:9.02:96,9,0	1/1:1,7:8:20.41:196,20,0	1/1:0,5:5:15.05:183,15,0	1/1:1,8:9:24.52:261,25,0	1/1:0,3:3:8.98:90,9,0
chr10	83105833	.	A	AT	4975.95	PASS	AB=0.785;AC=54;AF=0.964;AN=56;BaseQRankSum=1.883;DP=214;FS=24.891;HRun=1;HaplotypeScore=158.3303;InbreedingCoeff=-0.0572;MQ=79.11;MQ0=0;MQRankSum=-3.468;QD=23.25;ReadPosRankSum=2.847;VQSLOD=3.1175;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:15:30.03:307,30,0	1/1:3,1:4:9.03:109,9,0	0/1:7,3:10:8.63:162,0,9	0/1:9,3:11:61.93:114,0,62	1/1:5,0:5:11.87:97,12,0	1/1:5,0:6:18.05:194,18,0	1/1:13,0:12:35.38:335,35,0	1/1:6,0:6:15.04:178,15,0	1/1:10,0:10:22.57:215,23,0	1/1:6,0:6:18.03:209,18,0	1/1:3,0:3:8.97:75,9,0	1/1:10,0:10:25.61:261,26,0	1/1:5,0:5:12.03:123,12,0	1/1:8,0:8:23.42:237,23,0	1/1:8,0:8:24.06:254,24,0	1/1:6,0:6:15.40:141,15,0	1/1:10,0:10:20.64:197,21,0	1/1:4,0:4:9.02:108,9,0	1/1:8,0:7:18.06:228,18,0	1/1:4,0:4:9.91:96,10,0	1/1:13,0:12:21.01:212,21,0	1/1:9,0:9:23.68:200,24,0	1/1:2,0:2:2.99:24,3,0	1/1:9,0:8:11.98:111,12,0	1/1:8,0:8:23.52:221,24,0	1/1:5,0:5:15.05:189,15,0	1/1:9,0:10:27.02:286,27,0	1/1:4,0:4:9:94,9,0
chr10	83105839	.	T	TTCAGC	11085.04	PASS	AB=0.891;AC=54;AF=0.964;AN=56;BaseQRankSum=-0.611;DP=315;FS=25.533;HRun=0;HaplotypeScore=188.6481;InbreedingCoeff=-0.0487;MQ=79.69;MQ0=1;MQRankSum=-3.226;QD=35.19;ReadPosRankSum=0.369;VQSLOD=3.1769;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:43.70:657,44,0	1/1:8,0:8:14.22:297,14,0	0/1:13,0:13:42.59:475,0,43	0/1:13,3:17:99:421,0,135	1/1:6,0:6:11.93:122,12,0	1/1:10,0:10:24.08:400,24,0	1/1:24,0:23:51.17:889,51,0	1/1:8,0:8:21.06:327,21,0	1/1:10,0:10:26.58:397,27,0	1/1:11,0:11:33.11:637,33,0	1/1:6,0:6:12.03:156,12,0	1/1:14,0:14:39.58:596,40,0	1/1:6,0:6:15.05:230,15,0	1/1:11,0:11:33.10:481,33,0	1/1:14,0:14:36.06:487,36,0	1/1:7,0:7:18.03:224,18,0	1/1:16,0:16:31.55:447,32,0	1/1:6,0:6:12.04:204,12,0	1/1:10,0:9:24.08:417,24,0	1/1:5,0:5:14.72:195,15,0	1/1:18,0:17:18.06:261,18,0	1/1:11,0:11:27.07:365,27,0	1/1:4,0:4:5.85:72,6,0	1/1:11,0:10:24.07:397,24,0	1/1:15,0:15:45.07:765,45,0	1/1:11,0:10:27.07:483,27,0	1/1:12,0:12:30.10:497,30,0	1/1:5,0:5:12.04:187,12,0
chr10	83106776	.	AAAAAT	A	1847.16	PASS	AB=1.000;AC=15;AF=0.300;AN=50;BaseQRankSum=7.788;DP=406;FS=1.670;HRun=0;HaplotypeScore=75.9973;InbreedingCoeff=0.6473;MQ=71.61;MQ0=10;MQRankSum=-1.096;QD=15.79;ReadPosRankSum=-0.494;VQSLOD=3.0494;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:30.08:0,30,771	0/0:1,0:1:3.01:0,3,83	0/0:55,0:22:3:0,3,27	0/0:69,0:24:0.94:0,1,1	1/1:8,5:13:15.05:266,15,0	0/0:10,0:10:15.05:0,15,416	0/0:4,0:4:6.02:0,6,159	1/1:23,2:23:5.97:47,6,0	0/0:9,0:9:3.01:0,3,83	0/0:6,0:6:9.03:0,9,250	0/0:11,0:11:3.01:0,3,82	0/0:10,0:10:6.02:0,6,166	0/0:9,0:9:9.03:0,9,241	0/0:11,0:11:6.02:0,6,167	0/0:11,0:11:9.03:0,9,242	0/0:10,0:10:9.03:0,9,250	0/0:28,0:28:54.19:0,54,1454	1/1:17,11:28:30.10:526,30,0	1/1:12,5:17:15.05:266,15,0	./.	0/1:2,0:2:0:0,0,0	./.	0/0:5,0:5:3.01:0,3,77	./.	0/0:8,0:8:9.03:0,9,244	1/1:8,2:10:6.02:106,6,0	1/1:7,3:10:9.03:160,9,0	1/1:0,12:12:36.12:638,36,0
chr10	83108190	.	AAG	A	409.38	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.179;DP=591;FS=8.619;HRun=0;HaplotypeScore=73.3667;InbreedingCoeff=0.9962;MQ=73.62;MQ0=0;MQRankSum=-0.555;QD=27.29;ReadPosRankSum=1.706;VQSLOD=4.3817;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1965	0/0:10,0:10:27.09:0,27,475	0/0:17,0:12:24.07:0,24,374	0/0:21,0:20:32.88:0,33,438	0/0:25,0:25:66.21:0,66,1158	0/0:18,0:18:51.06:0,51,792	0/0:24,0:24:72.25:0,72,1295	0/0:23,0:23:60.21:0,60,1078	0/0:23,0:23:66.21:0,66,1142	0/0:29,0:29:81.25:0,81,1402	0/0:16,0:16:42.14:0,42,756	0/0:31,0:31:81.26:0,81,1420	0/0:27,0:27:72.25:0,72,1285	0/0:19,0:19:54.19:0,54,968	0/0:24,0:24:72.25:0,72,1296	0/0:17,0:17:48.16:0,48,855	0/0:21,0:21:63.22:0,63,1134	0/0:24,0:24:69.21:0,69,1209	0/0:17,0:17:45.13:0,45,745	0/0:19,0:19:57.18:0,57,997	1/1:1,14:15:36.12:504,36,0	0/0:18,0:18:48.15:0,48,835	0/0:12,0:12:33.10:0,33,562	0/0:28,0:28:81.28:0,81,1458	0/0:18,0:18:51.16:0,51,889	0/0:24,0:24:63.18:0,63,1082	0/0:20,0:20:57.20:0,57,1024	0/0:13,0:13:39.04:0,39,578
chr10	83108804	.	GGT	G	483.47	PASS	AB=0.934;AC=20;AF=0.385;AN=52;BaseQRankSum=1.190;DP=511;FS=2.766;HRun=0;HaplotypeScore=63.8903;InbreedingCoeff=-0.2144;MQ=61.91;MQ0=19;MQRankSum=0.339;QD=1.64;ReadPosRankSum=2.158;VQSLOD=0.9462;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:26:8.52:42,9,0	0/1:5,0:5:16.75:17,0,79	./.	0/0:54,0:18:0:0,0,0	0/0:16,0:16:3.01:0,3,44	0/1:15,0:15:17.19:17,0,152	0/1:20,1:24:23.23:23,0,43	0/0:18,0:16:2.88:0,3,15	0/1:8,0:8:23.19:23,0,79	0/0:14,0:12:14.93:0,15,156	./.	0/0:13,0:12:8.86:0,9,121	0/1:12,2:14:14.18:14,0,203	0/1:11,2:13:20.18:20,0,101	0/1:15,1:16:20.20:20,0,121	0/1:10,1:11:23.22:23,0,60	0/1:17,2:20:28.61:29,0,316	0/1:20,1:24:20.74:21,0,318	0/0:18,0:18:8.96:0,9,70	0/1:12,0:12:0:0,0,0	0/1:40,3:42:18.10:152,0,18	1/1:6,1:9:6.01:63,6,0	0/1:11,2:13:26.22:26,0,38	0/1:28,3:32:89.16:89,0,360	0/0:10,0:10:14.78:0,15,180	0/0:15,0:15:1.82:0,2,5	0/0:9,0:13:6.47:0,6,54	1/1:6,0:6:8.67:51,9,0
chr10	83109422	.	T	TC	1670.51	PASS	AC=18;AF=0.333;AN=54;BaseQRankSum=-1.914;DP=440;FS=3.941;HRun=8;HaplotypeScore=58.3399;InbreedingCoeff=0.9054;MQ=80.95;MQ0=2;MQRankSum=-1.759;QD=10.57;ReadPosRankSum=1.407;VQSLOD=1.9935;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,1:23:14.84:94,15,0	0/0:6,0:6:5.98:0,6,52	0/0:20,0:19:20.55:0,21,163	0/0:24,0:22:31.36:0,31,252	0/0:10,0:10:30.02:0,30,275	0/0:18,0:18:38.98:0,39,351	1/1:5,1:26:28.48:145,28,0	1/1:7,0:14:7.84:54,8,0	0/0:20,0:20:39.01:0,39,356	0/0:14,0:14:30.89:0,31,272	0/0:12,0:12:30:0,30,269	0/0:20,0:20:42.47:0,42,384	0/0:11,0:11:29.99:0,30,266	0/0:13,0:13:38.86:0,39,342	0/0:20,0:20:48:0,48,436	0/0:14,1:15:1.39:0,1,266	0/0:26,0:26:47.94:0,48,421	1/1:1,10:12:26.95:291,27,0	1/1:4,2:10:20.16:115,20,0	./.	1/1:14,37:50:52.82:871,53,0	0/0:10,0:10:23.98:0,24,212	0/0:11,0:11:27.01:0,27,247	0/0:22,0:22:54.01:0,54,486	0/0:8,0:8:18.01:0,18,165	1/1:4,5:10:14.94:154,15,0	1/1:1,1:9:11.53:78,12,0	1/1:0,3:3:6.02:69,6,0
chr10	83109788	.	AAC	A	144	PASS	AB=0.919;AC=16;AF=0.333;AN=48;BaseQRankSum=3.021;DP=479;FS=1.429;HRun=0;HaplotypeScore=67.6035;InbreedingCoeff=0.0851;MQ=63.41;MQ0=10;MQRankSum=-0.215;QD=0.80;ReadPosRankSum=0.098;VQSLOD=1.5173;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:3:0,3,25	0/0:9,0:9:6.02:0,6,81	./.	./.	./.	0/1:20,2:22:20.06:20,0,95	0/0:16,0:20:9:0,9,77	0/0:11,0:11:2.93:0,3,32	0/0:15,0:15:3.01:0,3,44	0/0:13,0:12:3.48:0,3,44	1/1:7,0:7:3.01:32,3,0	0/0:21,0:21:3.01:0,3,44	0/1:16,0:16:26.13:26,0,38	1/1:13,1:15:5.84:46,6,0	0/0:18,0:18:12.03:0,12,157	0/1:12,2:14:23.12:23,0,78	0/1:26,2:28:17.40:17,0,152	0/0:20,0:24:18.37:0,18,154	./.	1/1:9,2:9:3.01:32,3,0	1/1:34,0:33:4.04:14,4,0	1/1:6,0:6:2.60:10,3,0	0/1:10,2:12:23.12:23,0,79	0/0:34,1:35:12.72:0,13,526	0/1:13,1:14:35.49:37,0,35	0/0:18,0:18:14.53:0,15,207	0/0:9,0:9:0:0,0,0	0/0:4,0:4:3:0,3,25
chr10	83111289	.	AC	A	3064.94	PASS	AB=0.958;AC=16;AF=0.286;AN=56;BaseQRankSum=7.812;DP=507;FS=3.436;HRun=9;HaplotypeScore=59.3478;InbreedingCoeff=0.8245;MQ=74.77;MQ0=1;MQRankSum=-1.703;QD=16.13;ReadPosRankSum=0.658;VQSLOD=3.7974;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:30:19.64:576,20,0	0/0:11,0:11:24.07:0,24,275	0/0:19,0:19:18.58:0,19,423	0/0:22,0:21:18.92:0,19,391	0/0:17,1:18:20.71:0,21,491	0/0:20,1:21:26.63:0,27,520	1/1:4,27:32:80.36:742,80,0	1/1:6,14:20:42.01:384,42,0	0/0:14,0:15:35.94:0,36,395	0/0:11,0:11:27.08:0,27,312	0/0:10,0:10:27.08:0,27,308	0/0:24,0:24:60.16:0,60,681	0/0:15,0:15:42.11:0,42,471	0/0:15,0:15:39.12:0,39,450	0/0:14,0:14:42.12:0,42,476	0/0:24,0:24:69.15:0,69,757	0/0:25,0:25:70.98:0,71,778	1/1:3,19:21:57.03:521,57,0	1/1:0,15:15:45.01:406,45,0	1/1:1,7:8:21.01:192,21,0	0/1:37,0:37:5.04:22,0,5	0/0:9,0:9:21.05:0,21,231	0/0:11,0:11:30.04:0,30,330	0/0:31,0:31:78.23:0,78,899	0/1:10,1:11:9.43:9,0,144	0/0:13,0:13:5.99:0,6,310	1/1:1,14:15:45.02:412,45,0	0/0:9,0:9:9.03:0,9,104
chr10	83111296	.	C	CA	467.31	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.539;DP=499;FS=0.734;HRun=0;HaplotypeScore=69.4206;InbreedingCoeff=0.9221;MQ=71.01;MQ0=1;MQRankSum=1.424;QD=13.35;ReadPosRankSum=3.912;VQSLOD=4.2375;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:79.19:0,79,499	0/0:10,0:10:30.06:0,30,378	0/0:16,0:16:45.10:0,45,597	0/0:19,0:18:50.77:0,51,598	0/0:19,0:19:54.06:0,54,686	0/0:19,0:19:57.05:0,57,688	0/0:34,0:34:96.50:0,97,576	0/0:18,0:18:40.37:0,40,225	0/0:13,0:13:31.13:0,31,472	0/0:12,0:12:33.09:0,33,430	0/0:12,0:12:30.09:0,30,402	0/0:22,0:22:66.18:0,66,869	0/0:16,0:16:45.12:0,45,592	0/0:15,0:15:45.11:0,45,592	0/0:15,0:15:45.13:0,45,597	0/0:24,0:24:72.19:0,72,925	0/0:26,0:26:77.24:0,77,984	0/0:24,0:23:58.52:0,59,342	0/0:18,0:18:52.39:0,52,312	0/0:8,0:8:20.47:0,20,117	1/1:8,27:35:17.86:558,18,0	0/0:9,0:9:24.06:0,24,301	0/0:12,0:12:36.10:0,36,468	0/0:28,0:28:84.26:0,84,1137	0/0:7,0:7:17.97:0,18,225	0/0:16,0:16:47.13:0,47,538	0/0:19,0:18:55.55:0,56,334	0/0:3,0:3:9.03:0,9,125
chr10	83111297	.	C	CA	644.81	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=6.070;DP=499;FS=1.269;HRun=0;HaplotypeScore=69.1590;InbreedingCoeff=0.5183;MQ=71.01;MQ0=1;MQRankSum=0.252;QD=12.40;ReadPosRankSum=-0.075;VQSLOD=4.2120;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:46.60:0,47,328	0/0:10,0:10:24.08:0,24,324	0/0:16,0:16:44.93:0,45,558	0/0:19,0:18:50.43:0,50,532	0/0:19,0:19:53.82:0,54,685	0/0:19,0:19:56.79:0,57,680	0/0:35,0:35:18.77:0,19,285	0/1:16,0:16:16.20:16,0,106	0/0:12,0:12:28.13:0,28,440	0/0:12,0:12:33.09:0,33,429	0/0:12,0:12:30.09:0,30,402	0/0:23,0:23:63.18:0,63,834	0/0:17,0:17:45.11:0,45,564	0/0:15,0:15:42.12:0,42,565	0/0:15,0:15:45.13:0,45,596	0/0:24,0:24:69.17:0,69,886	0/0:25,0:25:74.02:0,74,949	0/0:23,1:23:27.41:0,27,226	0/0:18,0:18:0.69:0,1,156	0/0:7,0:7:14.63:0,15,63	1/1:9,27:36:61.77:733,62,0	0/0:9,0:9:21.05:0,21,267	0/0:12,0:12:36.10:0,36,467	0/0:28,0:28:81.25:0,81,1086	0/0:7,0:7:17.71:0,18,187	0/0:16,0:16:20.93:0,21,487	0/0:19,0:18:24.99:0,25,223	0/0:4,0:4:9.03:0,9,117
chr10	83112898	.	A	AG	1055.34	PASS	AB=1.000;AC=35;AF=0.921;AN=38;BaseQRankSum=-3.663;DP=62;FS=40.319;HRun=10;HaplotypeScore=13.9181;InbreedingCoeff=-0.0100;MQ=109.70;MQ0=0;MQRankSum=-2.462;QD=21.99;ReadPosRankSum=-0.420;VQSLOD=1.2275;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:3.01:42,3,0	./.	0/1:5,0:2:29.95:31,0,30	0/0:11,0:12:3.13:0,3,80	./.	1/1:0,1:1:3.01:41,3,0	1/1:1,8:9:18.06:252,18,0	./.	1/1:2,0:2:2.54:39,3,0	1/1:0,1:1:3.01:40,3,0	./.	1/1:0,2:2:3.01:42,3,0	1/1:1,0:1:3.01:41,3,0	1/1:1,1:2:3.01:42,3,0	1/1:2,0:2:5.97:61,6,0	./.	1/1:0,3:3:9.03:124,9,0	1/1:0,2:2:3.01:42,3,0	./.	1/1:1,1:2:3.48:37,3,0	1/1:1,5:6:6.02:83,6,0	./.	1/1:1,0:1:3.01:41,3,0	1/1:1,3:4:9.01:108,9,0	./.	1/1:0,1:1:3.01:42,3,0	1/1:1,1:2:3.01:41,3,0	./.
chr10	83114172	.	C	CAG	635.32	PASS	AB=0.990;AC=33;AF=0.635;AN=52;BaseQRankSum=0.017;DP=604;FS=35.942;HRun=0;HaplotypeScore=94.6391;InbreedingCoeff=0.2394;MQ=75.02;MQ0=17;MQRankSum=-1.662;QD=1.48;ReadPosRankSum=-0.132;VQSLOD=0.1179;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:39:11.96:95,12,0	1/1:8,0:8:2.80:13,3,0	./.	0/1:52,0:27:0:1,0,0	0/1:19,0:19:6.42:18,0,6	0/0:15,0:17:9.57:0,10,62	1/1:23,0:23:9.60:91,10,0	1/1:31,0:31:2.98:22,3,0	0/0:18,0:19:8.72:0,9,77	0/1:24,0:24:26.06:28,0,26	1/1:12,0:12:5.98:54,6,0	0/0:24,0:28:17.39:0,17,113	1/1:12,2:14:3.01:44,3,0	1/1:12,7:19:6.02:85,6,0	1/1:23,0:22:8.59:111,9,0	0/0:14,0:16:6.48:0,6,65	0/1:24,1:27:32.32:32,0,92	1/1:10,0:10:4.81:30,5,0	1/1:21,0:21:6:54,6,0	./.	0/0:16,0:14:0:0,0,0	1/1:11,0:11:2.98:22,3,0	0/1:13,0:11:0.84:1,0,20	0/1:24,1:27:11.60:12,0,231	0/0:15,0:15:3.48:0,3,31	0/1:30,0:30:4.61:25,0,5	1/1:12,0:11:3.81:44,4,0	1/1:13,0:13:0.47:1,0,0
chr10	83114220	.	GGGAGAT	G	6013.38	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=-1.136;DP=587;FS=1.717;HRun=0;HaplotypeScore=125.8454;InbreedingCoeff=0.6091;MQ=70.28;MQ0=11;MQRankSum=1.563;QD=28.77;ReadPosRankSum=-2.357;VQSLOD=4.4985;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:44:91.15:990,0,91	0/0:5,0:5:12.04:0,12,202	0/0:33,0:17:47.94:0,48,785	0/0:46,0:17:43.37:0,43,704	0/0:20,0:20:36.07:0,36,721	0/0:15,0:15:36.11:0,36,685	0/1:22,0:22:50.54:812,0,51	1/1:0,31:31:87.69:1377,88,0	0/0:15,0:15:36.12:0,36,692	0/0:18,0:18:54.18:0,54,1201	0/0:16,0:14:28.65:0,29,550	0/0:26,0:26:53.80:0,54,1173	0/0:11,0:11:29.90:0,30,453	0/0:20,0:21:39.05:0,39,697	0/0:22,0:21:45.14:0,45,949	0/0:17,0:17:38.12:0,38,742	0/0:30,0:29:62.52:0,63,1372	0/1:14,0:14:78.88:360,0,79	1/1:1,15:16:39.58:595,40,0	1/1:1,15:16:2.94:18,3,0	1/1:18,0:16:29.98:481,30,0	0/0:11,0:11:31.28:0,31,509	0/0:14,0:14:27.05:0,27,531	0/0:35,0:35:80.64:0,81,1908	0/0:23,0:23:56.78:0,57,1005	0/1:22,0:22:99:685,0,173	1/1:16,0:15:33.44:415,33,0	1/1:10,0:9:18.06:281,18,0
chr10	83115597	.	G	GA	5478.79	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-12.239;DP=657;FS=4.076;HRun=9;HaplotypeScore=66.5596;InbreedingCoeff=0.9977;MQ=79.56;MQ0=0;MQRankSum=-1.697;QD=23.51;ReadPosRankSum=-1.830;VQSLOD=5.1403;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:7,31:38:78.14:835,78,0	0/0:9,0:9:23.67:0,24,194	0/0:14,0:15:24.84:0,25,177	0/0:16,0:18:32.81:0,33,255	0/0:24,0:24:59.97:0,60,521	0/0:10,0:10:23.98:0,24,208	1/1:3,23:26:44.11:525,44,0	1/1:5,19:24:57.15:630,57,0	0/0:18,0:18:47.97:0,48,413	0/0:31,0:31:68.97:0,69,599	0/0:23,0:23:38.46:0,38,485	0/0:34,0:35:86:0,86,732	0/0:20,0:20:47.97:0,48,416	0/0:24,0:24:38.50:0,39,496	0/0:34,0:34:83.95:0,84,724	0/0:28,0:28:65.98:0,66,573	0/0:39,0:39:99:0,108,937	1/1:4,16:20:42.11:465,42,0	1/1:4,14:18:39.07:413,39,0	1/1:5,23:28:40.09:658,40,0	1/1:3,6:9:18.05:199,18,0	0/0:32,0:32:89.95:0,90,774	0/0:20,1:21:56.97:0,57,494	0/0:11,0:11:32.99:0,33,287	0/0:31,0:32:83.01:0,83,709	1/1:7,25:32:75.15:808,75,0	1/1:1,21:23:54.04:581,54,0	1/1:2,13:15:33.09:365,33,0
chr10	83118417	.	C	CAG	7096.09	PASS	AB=0.840;AC=18;AF=0.321;AN=56;BaseQRankSum=3.464;DP=1163;FS=8.185;HRun=0;HaplotypeScore=151.3772;InbreedingCoeff=0.8062;MQ=44.02;MQ0=126;MQRankSum=-4.697;QD=15.13;ReadPosRankSum=1.318;VQSLOD=4.1687;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,49:61:13.39:610,13,0	0/0:12,0:10:24.07:0,24,345	0/0:33,0:8:13.27:0,13,175	0/0:40,0:8:8.01:0,8,181	0/0:36,0:30:45.06:0,45,571	0/0:31,0:25:54.07:0,54,733	1/1:29,27:39:14.50:239,15,0	1/1:29,7:22:32.01:524,32,0	0/0:33,0:29:48.08:0,48,624	0/0:55,0:39:99:0,111,1351	0/0:19,0:16:27.01:0,27,331	0/0:44,0:38:78.03:0,78,937	0/0:33,0:27:50.23:0,50,659	0/0:54,0:46:72.02:0,72,964	0/0:41,0:35:69.07:0,69,852	0/0:45,0:40:81.13:0,81,1050	0/0:48,0:46:72.68:0,73,1247	1/1:28,11:32:17.45:949,17,0	0/1:28,4:22:41.68:604,0,42	1/1:17,17:32:69.18:1189,69,0	1/1:51,44:63:10.49:445,10,0	0/0:39,0:34:63.58:0,64,824	0/0:27,0:23:39.06:0,39,522	0/0:74,0:68:99:0,126,1579	0/0:30,0:25:34.82:0,35,491	0/1:42,15:43:18.59:1359,0,19	1/1:8,22:30:42.95:831,43,0	1/1:6,12:15:18.06:345,18,0
chr10	83118457	.	GAC	G	250.49	PASS	AB=0.967;AC=9;AF=0.173;AN=52;BaseQRankSum=7.168;DP=1224;FS=15.657;HRun=0;HaplotypeScore=166.9136;InbreedingCoeff=-0.0334;MQ=37.08;MQ0=215;MQRankSum=-3.533;QD=0.79;ReadPosRankSum=-1.084;VQSLOD=1.5275;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:59,5:45:2.65:15,3,0	0/0:18,0:14:12.46:0,12,178	./.	./.	0/0:30,0:20:18.06:0,18,289	0/0:33,0:25:29.14:0,29,389	0/1:64,4:38:5.89:6,0,28	0/0:66,0:19:30.07:0,30,398	0/0:45,0:39:56.81:0,57,802	0/0:78,0:51:76.35:0,76,1089	0/0:24,1:19:9.03:0,9,134	0/0:60,0:47:68.76:0,69,1092	0/0:40,0:29:37.27:0,37,607	0/0:49,0:38:54.14:0,54,840	0/0:52,0:44:40.55:0,41,1093	0/0:43,0:36:69.53:0,70,1174	0/0:57,0:49:99:0,107,1532	0/1:32,0:23:54.88:55,0,183	0/1:26,0:10:51.90:52,0,95	0/1:32,1:26:47.10:47,0,60	0/0:117,3:63:2.85:0,3,23	0/0:49,0:34:24.85:0,25,551	0/0:26,0:20:20.70:0,21,204	0/0:79,0:68:64.73:0,65,1480	0/0:35,0:30:21.07:0,21,341	0/1:50,3:30:92.22:92,0,213	0/1:26,2:22:50.68:101,0,51	0/1:11,0:6:13.65:14,0,28
chr10	83118497	.	GAC	G	142.59	PASS	AB=0.830;AC=3;AF=0.056;AN=54;BaseQRankSum=3.799;DP=1024;FS=2.763;HRun=0;HaplotypeScore=119.1501;InbreedingCoeff=0.3518;MQ=38.67;MQ0=138;MQRankSum=-4.528;QD=1.70;ReadPosRankSum=-0.876;VQSLOD=2.4266;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,10:31:0:0,0,0	0/0:20,0:17:30.07:0,30,510	0/0:8,0:1:3.01:0,3,51	0/0:13,0:3:7.27:0,7,105	0/0:27,0:18:27.08:0,27,409	0/0:36,0:30:54.19:0,54,799	1/1:37,8:31:2.87:38,3,0	0/0:64,0:25:49.09:0,49,366	0/0:40,0:35:63.04:0,63,1015	0/0:59,0:36:80.85:0,81,1271	0/0:18,0:15:21.07:0,21,349	0/0:64,0:52:99:0,109,1794	0/0:36,0:32:61.09:0,61,1009	0/0:41,0:34:68.80:0,69,1042	0/0:45,0:41:87.24:0,87,1346	0/0:44,0:38:72.41:0,72,1263	0/0:56,0:48:99:0,110,1762	0/0:23,0:16:15:0,15,124	0/0:27,0:8:23.70:0,24,230	0/0:21,0:14:5.67:0,6,101	./.	0/0:34,0:23:51.63:0,52,824	0/0:15,0:13:24.08:0,24,390	0/0:72,0:61:99:0,111,1776	0/0:29,0:26:42.14:0,42,684	0/1:31,8:25:36.66:195,0,37	0/0:16,0:11:10.66:0,11,68	0/0:5,0:2:3.01:0,3,33
chr10	83118509	.	GACAC	G	920.38	PASS	AB=0.897;AC=7;AF=0.130;AN=54;BaseQRankSum=5.048;DP=905;FS=25.871;HRun=0;HaplotypeScore=125.2807;InbreedingCoeff=0.4091;MQ=41.52;MQ0=100;MQRankSum=-7.874;QD=7.08;ReadPosRankSum=-1.003;VQSLOD=0.3560;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,10:26:0:0,0,0	0/0:17,0:16:36.12:0,36,874	0/0:15,0:4:8.94:0,9,118	0/0:18,0:4:10.27:0,10,185	0/0:21,0:16:21.07:0,21,508	0/0:35,0:29:61.14:0,61,1400	0/0:28,11:29:3.68:0,4,15	1/1:40,13:21:5.39:586,5,0	0/0:33,0:29:62.92:0,63,1378	0/0:46,0:33:69.05:0,69,1481	0/0:15,0:13:21.07:0,21,503	0/0:64,0:54:99:0,124,2923	0/0:32,0:28:69.22:0,69,1656	0/0:39,0:34:77.87:0,78,1715	0/0:38,0:35:81.22:0,81,1823	0/0:38,0:34:69.43:0,69,2075	0/0:56,1:50:99:0,123,2662	0/1:17,1:11:45.77:46,0,57	0/1:17,2:6:1.94:99,0,2	0/0:12,6:14:5.85:0,6,141	./.	0/0:38,0:30:78.19:0,78,1690	0/0:16,0:15:30.10:0,30,720	0/0:66,0:57:99:0,123,2793	0/0:26,0:26:51.15:0,51,1090	0/1:21,3:17:99:207,0,109	1/1:5,9:9:5.35:106,5,0	0/0:3,0:2:2.98:0,3,22
chr10	83118521	.	GACACAGATACAC	G	1220.72	PASS	AB=1.000;AC=8;AF=0.160;AN=50;BaseQRankSum=5.130;DP=826;FS=44.353;HRun=0;HaplotypeScore=203.7511;InbreedingCoeff=0.3156;MQ=45.95;MQ0=62;MQRankSum=-7.643;QD=9.25;ReadPosRankSum=-3.011;VQSLOD=1.0417;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:19,0:18:39.13:0,39,1305	0/0:30,0:5:14.92:0,15,272	0/0:34,0:8:4.63:0,5,277	0/0:20,0:16:30.10:0,30,912	0/0:29,0:29:63.22:0,63,2047	1/1:31,0:26:2.65:54,3,0	0/1:45,0:16:30.78:394,0,31	0/0:33,0:33:77.99:0,78,2355	0/0:39,0:33:96.30:0,96,2362	0/0:16,0:14:18.06:0,18,614	0/0:56,0:51:99:0,117,3761	0/0:32,0:29:72.23:0,72,2514	0/0:35,0:34:82.83:0,83,2427	0/0:34,0:31:75.24:0,75,2314	0/0:37,0:36:95.81:0,96,2906	0/0:52,0:47:99:0,102,3523	0/1:14,0:9:34.79:207,0,35	0/1:8,0:4:6.89:126,0,7	0/0:18,0:13:2.66:0,3,61	./.	0/0:44,0:38:99:0,104,2872	0/0:15,0:15:39.13:0,39,1117	0/0:58,0:55:99:0,117,3366	0/0:25,0:25:54.19:0,54,1705	1/1:20,2:17:24.96:474,25,0	0/1:12,0:10:17.77:98,0,18	./.
chr10	83118643	.	TAC	T	2545.64	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=8.737;DP=831;FS=0.944;HRun=0;HaplotypeScore=126.5950;InbreedingCoeff=0.8685;MQ=48.25;MQ0=44;MQRankSum=-3.269;QD=8.90;ReadPosRankSum=0.181;VQSLOD=3.4465;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,21:25:24.94:293,25,0	0/0:13,0:13:24.08:0,24,401	0/0:48,0:9:14.87:0,15,267	0/1:37,0:5:4.21:4,0,93	0/0:27,0:27:71.04:0,71,1113	0/0:27,0:25:45.14:0,45,733	1/1:15,13:26:11.88:153,12,0	1/1:15,3:5:3.01:38,3,0	0/0:34,0:33:60.19:0,60,954	0/0:34,1:32:6.14:0,6,973	0/0:18,0:18:48.12:0,48,745	0/0:55,0:50:99:0,99,1589	0/0:31,0:29:60.19:0,60,959	0/0:27,0:25:53.41:0,53,897	0/0:25,0:24:48.15:0,48,771	0/0:37,0:35:84.26:0,84,1333	0/0:39,0:35:88.11:0,88,1392	1/1:5,11:13:11.40:123,11,0	1/1:13,5:8:18.02:212,18,0	1/1:2,10:8:15.04:188,15,0	1/1:38,40:60:54.05:622,54,0	0/0:28,0:25:57.18:0,57,924	0/0:20,1:20:16:0,16,810	0/0:64,0:59:99:0,122,1978	0/0:16,0:16:30.07:0,30,473	1/1:8,22:25:63.15:780,63,0	1/1:4,7:10:21.07:267,21,0	1/1:3,3:5:6.02:76,6,0
chr10	83118668	.	T	TAC	893.17	PASS	AB=0.781;AC=17;AF=0.315;AN=54;BaseQRankSum=7.759;DP=736;FS=0.673;HRun=0;HaplotypeScore=128.5232;InbreedingCoeff=0.7876;MQ=50.34;MQ0=25;MQRankSum=-0.282;QD=6.16;ReadPosRankSum=-2.106;VQSLOD=3.1276;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,6:17:11.42:113,11,0	0/0:7,0:7:16.85:0,17,185	0/0:61,0:14:26.43:0,26,270	0/0:39,0:7:8.26:0,8,81	0/0:26,0:26:51.13:0,51,631	0/0:30,0:30:63.13:0,63,777	1/1:12,2:12:9:105,9,0	./.	0/0:38,0:37:92.71:0,93,1133	0/0:31,0:30:61.34:0,61,772	0/0:15,0:15:30.04:0,30,355	0/0:54,0:52:86.95:0,87,1240	0/0:32,0:30:72.12:0,72,877	0/0:30,0:30:63.14:0,63,797	0/0:29,0:29:69.09:0,69,826	0/0:37,0:36:75.24:0,75,970	0/0:37,0:35:86.84:0,87,1039	1/1:4,3:5:6.23:63,6,0	1/1:9,2:4:5.98:71,6,0	1/1:4,4:5:3.01:47,3,0	1/1:36,15:36:16.82:191,17,0	0/0:28,0:27:63.07:0,63,783	0/0:23,0:23:45.12:0,45,576	0/0:57,0:55:99:0,123,1536	0/0:12,0:12:15.09:0,15,283	0/1:18,7:19:1.98:411,0,2	1/1:4,2:5:3:25,3,0	1/1:1,1:1:3.01:42,3,0
chr10	83118729	.	GAC	G	35.81	PASS	AB=0.892;AC=11;AF=0.204;AN=54;BaseQRankSum=5.646;DP=660;FS=9.063;HRun=0;HaplotypeScore=95.4157;InbreedingCoeff=0.5451;MQ=54.81;MQ0=18;MQRankSum=-3.990;QD=0.45;ReadPosRankSum=-1.036;VQSLOD=0.6406;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:6:0.09:0,0,0	0/0:8,0:8:10.92:0,11,168	0/0:55,0:8:2.58:0,3,16	0/0:54,0:15:19.91:0,20,191	0/0:19,0:18:42.12:0,42,662	0/0:23,0:23:53.95:0,54,812	./.	0/0:13,0:9:2.80:0,3,13	0/0:41,1:42:61.84:0,62,1460	0/0:39,1:38:61.53:0,62,1359	0/0:13,1:14:22.51:0,23,477	0/0:40,0:39:96.31:0,96,1547	0/0:29,0:28:65.19:0,65,994	0/0:23,1:24:22.47:0,22,831	0/0:27,2:29:3.20:0,3,1059	0/0:35,0:34:90.22:0,90,1397	0/0:30,0:30:75.19:0,75,1185	1/1:4,3:3:5.74:30,6,0	1/1:11,2:3:6.01:59,6,0	0/1:6,2:6:0:0,0,0	1/1:33,5:30:2.66:12,3,0	0/0:25,0:24:16.98:0,17,737	0/0:20,0:20:42.09:0,42,577	0/0:45,0:45:99:0,99,1532	0/0:22,2:24:21.68:0,22,774	0/1:6,1:5:16.32:28,0,16	1/1:4,0:3:3.56:13,4,0	0/1:2,0:2:0.93:25,0,1
chr10	83118733	.	C	CAGAT	254.77	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=6.020;DP=688;FS=7.346;HRun=0;HaplotypeScore=125.1416;InbreedingCoeff=0.5970;MQ=53.45;MQ0=23;MQRankSum=-1.695;QD=2.63;ReadPosRankSum=-3.336;VQSLOD=0.9909;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:8:1.42:5,1,0	0/0:10,0:8:20.98:0,21,319	0/1:58,0:6:2.96:3,0,66	0/0:55,0:14:10.58:0,11,350	0/0:19,0:18:51.04:0,51,923	0/0:27,0:27:62.14:0,62,1116	1/1:6,0:4:8.95:91,9,0	0/0:11,0:8:18.05:0,18,262	0/0:41,0:41:99:0,123,2253	0/0:44,0:42:99:0,117,2092	0/0:14,0:13:33.11:0,33,633	0/0:40,0:39:99:0,106,2024	0/0:31,0:30:83.90:0,84,1425	0/0:24,0:24:66.70:0,67,1254	0/0:29,0:29:87.27:0,87,1583	0/0:34,0:33:99:0,99,1872	0/0:31,0:31:87.26:0,87,1619	1/1:6,1:3:5.61:93,6,0	0/0:14,0:3:9.02:0,9,98	0/0:7,0:5:2.99:0,3,36	0/0:35,5:32:11.94:0,12,171	0/0:26,0:25:59.87:0,60,1100	0/0:19,0:19:42.14:0,42,797	0/0:48,0:47:99:0,117,2170	0/0:24,0:24:53.45:0,53,1068	0/1:7,0:5:64.18:64,0,102	1/1:4,1:4:5.81:87,6,0	1/1:2,2:4:3.01:53,3,0
chr10	83118745	.	GACATACACAAT	G	581.37	PASS	AB=0.984;AC=8;AF=0.143;AN=56;BaseQRankSum=5.871;DP=658;FS=7.710;HRun=0;HaplotypeScore=183.0677;InbreedingCoeff=0.2991;MQ=51.59;MQ0=20;MQRankSum=-5.175;QD=8.07;ReadPosRankSum=-2.093;VQSLOD=1.6767;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:12:3.85:0,4,174	0/0:7,0:5:12.04:0,12,465	0/0:55,0:8:20.57:0,21,490	0/0:50,0:13:19.02:0,19,499	0/0:17,0:16:41.97:0,42,1123	0/0:26,0:26:60.11:0,60,2103	0/0:11,0:10:21.07:0,21,489	0/0:10,0:5:12.04:0,12,226	0/0:35,0:35:99:0,102,3626	0/0:40,0:39:99:0,105,4210	0/0:16,0:15:30.03:0,30,851	0/0:40,0:39:99:0,108,4132	0/0:30,0:29:69.08:0,69,2830	0/0:24,0:24:54.16:0,54,2282	0/0:26,0:26:78.22:0,78,3075	0/0:35,0:34:98.66:0,99,3786	0/0:32,0:32:89.24:0,89,2861	1/1:4,2:3:4.57:82,5,0	1/1:12,1:4:12.04:300,12,0	0/0:7,2:7:4.83:0,5,95	0/1:27,2:23:59.45:59,0,295	0/0:23,0:23:54.01:0,54,1827	0/0:16,0:16:36.07:0,36,1188	0/0:44,0:43:99:0,114,4807	0/0:23,0:23:35.10:0,35,1746	0/1:11,0:10:99:203,0,486	0/1:8,0:7:58.18:58,0,168	0/1:4,0:4:14.83:15,0,92
chr10	83118754	.	A	ACAC	443.78	PASS	AB=0.839;AC=5;AF=0.089;AN=56;BaseQRankSum=5.362;DP=656;FS=3.665;HRun=0;HaplotypeScore=114.9760;InbreedingCoeff=0.2359;MQ=50.65;MQ0=27;MQRankSum=-5.788;QD=11.38;ReadPosRankSum=-1.349;VQSLOD=2.7996;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,1:10:3.43:0,3,108	0/0:7,0:6:12.04:0,12,224	0/0:65,0:9:23.86:0,24,311	0/0:53,0:13:20.66:0,21,337	0/0:20,0:19:45.11:0,45,760	0/0:22,0:22:57.14:0,57,980	0/0:11,0:11:24.08:0,24,443	0/0:16,0:8:21.07:0,21,344	0/0:34,0:34:96.32:0,96,1745	0/0:45,0:41:99:0,114,2026	0/0:19,0:17:36.07:0,36,589	0/0:37,0:36:99:0,105,1892	0/0:26,0:27:73.26:0,73,1263	0/0:21,0:21:57.19:0,57,1029	0/0:26,0:26:75.26:0,75,1377	0/0:31,0:30:93.28:0,93,1666	0/0:30,0:30:84.06:0,84,1436	0/1:5,0:2:38.07:53,0,38	1/1:8,2:4:11.99:188,12,0	0/0:6,0:8:2.99:0,3,53	0/0:20,1:17:12.03:0,12,231	0/0:23,0:22:48.15:0,48,877	0/0:16,0:16:39.08:0,39,625	0/0:42,0:40:99:0,105,1944	0/0:19,0:19:21.72:0,22,810	0/1:11,3:14:99:261,0,396	0/1:5,2:7:60.18:60,0,102	0/0:3,3:6:6.02:0,6,108
chr10	83118796	.	GAC	G	338.92	PASS	AB=0.963;AC=10;AF=0.192;AN=52;BaseQRankSum=2.180;DP=865;FS=12.379;HRun=0;HaplotypeScore=154.1633;InbreedingCoeff=0.2085;MQ=43.63;MQ0=50;MQRankSum=1.991;QD=1.29;ReadPosRankSum=-0.887;VQSLOD=2.0739;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,3:28:14.78:145,15,0	0/0:12,0:11:8.51:0,9,100	./.	./.	0/0:26,0:23:8.84:0,9,117	0/0:29,0:28:21.52:0,22,271	1/1:37,10:45:19.49:129,19,0	0/0:42,0:24:12.91:0,13,71	0/1:32,1:32:23.15:23,0,488	0/0:52,0:37:32.81:0,33,380	0/0:20,0:14:4.44:0,4,118	0/0:45,0:44:45.82:0,46,595	0/1:35,1:33:4.35:4,0,476	0/1:27,0:25:8.94:9,0,312	0/1:32,0:30:23.03:23,0,464	0/1:31,5:35:99:126,0,439	0/0:33,1:33:29.57:0,30,456	0/0:12,0:11:21.53:0,22,193	0/0:26,0:14:23.35:0,23,213	0/0:30,0:25:9.47:0,9,83	0/0:74,0:57:50.99:0,51,351	0/0:44,0:34:12.50:0,13,460	0/1:17,0:17:24.14:24,0,81	0/0:45,0:43:35.86:0,36,455	0/0:27,0:26:30.04:0,30,364	0/0:34,0:30:2.19:0,2,75	0/0:18,0:17:11.96:0,12,94	0/0:11,0:12:0.42:0,0,1
chr10	83118808	.	C	CAG	898.56	PASS	AB=0.987;AC=6;AF=0.107;AN=56;BaseQRankSum=3.822;DP=890;FS=4.506;HRun=0;HaplotypeScore=150.6396;InbreedingCoeff=0.1894;MQ=44.93;MQ0=38;MQRankSum=-0.647;QD=5.05;ReadPosRankSum=2.081;VQSLOD=3.0929;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:32:29.71:0,30,219	0/0:12,0:10:14.97:0,15,162	0/0:8,0:1:2.94:0,3,18	0/0:8,0:2:6.01:0,6,57	0/0:25,0:23:35.55:0,36,300	0/0:25,0:24:44.97:0,45,483	0/0:49,0:46:45.19:0,45,301	0/1:35,0:24:39.05:39,0,266	0/0:34,0:32:45.42:0,45,709	0/0:49,0:39:99:0,106,976	0/0:21,0:15:23.96:0,24,216	0/0:44,0:43:91.94:0,92,950	0/0:33,0:31:57.63:0,58,784	0/0:28,0:25:50.72:0,51,570	0/0:35,0:34:77.70:0,78,862	0/0:43,0:41:89.87:0,90,944	0/0:38,0:36:54.60:0,55,718	0/1:17,0:11:86.28:86,0,117	0/0:23,0:14:19.21:0,19,204	0/0:31,0:27:13.60:0,14,197	1/1:71,5:61:6.60:874,7,0	0/0:47,0:38:51.94:0,52,758	0/0:21,0:21:32.64:0,33,281	0/0:49,0:46:77.75:0,78,928	0/0:32,0:31:24.01:0,24,444	0/1:35,2:35:10.17:10,0,365	0/0:21,0:20:29.75:0,30,197	0/1:13,0:12:2.30:2,0,64
chr10	83119079	.	AGT	A	1071.66	PASS	AB=0.933;AC=20;AF=0.385;AN=52;BaseQRankSum=6.556;DP=768;FS=5.523;HRun=0;HaplotypeScore=103.7714;InbreedingCoeff=0.0077;MQ=58.94;MQ0=13;MQRankSum=-0.088;QD=2.28;ReadPosRankSum=1.213;VQSLOD=1.8403;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,12:38:12.03:132,12,0	0/1:8,0:8:24.97:25,0,39	./.	./.	0/0:17,0:15:12.02:0,12,159	0/0:24,0:24:24.03:0,24,300	0/0:25,0:34:18.01:0,18,193	0/0:29,0:29:6.02:0,6,66	0/1:23,3:27:35.10:35,0,474	0/0:36,2:37:7.86:0,8,480	0/1:13,0:14:2.10:2,0,102	0/1:29,2:31:64.34:64,0,415	0/1:19,6:24:36:36,0,328	0/1:22,1:24:8.15:8,0,408	0/1:37,0:37:41.81:42,0,652	0/1:28,0:29:2.04:2,0,531	0/1:36,1:37:19.03:19,0,335	1/1:15,1:22:14.91:86,15,0	0/0:16,0:20:13.97:0,14,170	0/0:10,0:17:5.49:0,5,24	0/1:29,0:39:18.88:19,0,21	0/0:19,0:18:3.91:0,4,193	0/0:18,0:19:9.92:0,10,227	0/1:47,1:48:68.33:68,0,649	0/1:18,0:18:17.97:18,0,165	1/1:25,11:36:31.81:284,32,0	0/0:8,0:18:14.99:0,15,128	1/1:15,17:32:36.10:397,36,0
chr10	83120017	.	G	GTACCTC	8643.94	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-4.216;DP=790;FS=18.844;HRun=0;HaplotypeScore=156.7039;InbreedingCoeff=0.9624;MQ=91.74;MQ0=0;MQRankSum=-14.004;QD=80.78;ReadPosRankSum=-3.246;VQSLOD=3.8971;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:99:0,135,2963	0/0:8,0:8:15.05:0,15,343	0/0:33,0:33:75.10:0,75,1517	0/0:34,0:34:86.66:0,87,1777	0/0:19,0:19:54.16:0,54,1122	0/0:30,0:30:87.30:0,87,1988	0/0:35,0:35:99:0,99,2215	1/1:18,12:33:96.33:3127,96,0	0/0:37,0:37:99:0,102,2308	0/0:22,0:22:60.21:0,60,1356	0/0:20,0:20:54.19:0,54,1213	0/0:49,0:49:99:0,135,2995	0/0:35,0:35:99:0,102,2242	0/0:26,0:26:75.26:0,75,1713	0/0:36,0:36:96.32:0,96,2150	0/0:34,0:34:96.32:0,96,2132	0/0:42,1:43:4.09:0,4,2122	1/1:4,10:19:33.11:1120,33,0	1/1:6,6:12:30.10:944,30,0	1/1:6,11:20:42.14:1384,42,0	0/0:41,0:41:99:0,114,2490	0/0:23,0:23:63.22:0,63,1439	0/0:19,0:19:51.18:0,51,1161	0/0:37,0:37:99:0,102,2246	0/0:17,0:17:51.18:0,51,1165	0/0:27,0:27:72.23:0,72,1586	1/1:9,14:23:66.23:2069,66,0	0/0:8,0:8:24.08:0,24,548
chr10	83123028	.	A	AAG	1807.69	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-0.704;DP=600;FS=14.441;HRun=0;HaplotypeScore=84.5314;InbreedingCoeff=0.4576;MQ=59.39;MQ0=12;MQRankSum=-1.606;QD=8.65;ReadPosRankSum=-3.275;VQSLOD=1.6185;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:36:72.99:73,0,78	0/0:2,0:2:5.99:0,6,57	0/0:51,0:14:29.48:0,29,236	0/1:33,0:10:15.85:16,0,54	0/0:23,0:23:47.80:0,48,518	0/0:17,0:17:45.11:0,45,504	0/1:18,0:18:21.96:22,0,103	1/1:37,7:48:96.13:1059,96,0	0/0:18,0:18:27.06:0,27,299	0/0:20,0:20:38.98:0,39,373	0/0:13,0:13:15.02:0,15,157	0/0:19,0:19:30.03:0,30,317	0/0:10,0:10:20.85:0,21,225	0/0:17,0:17:33.07:0,33,361	0/0:14,0:14:23.86:0,24,260	0/0:21,0:21:50.70:0,51,529	0/0:29,0:29:57.11:0,57,635	0/0:29,0:28:33.74:0,34,217	1/1:19,4:21:35.99:411,36,0	1/1:4,1:6:11.97:124,12,0	0/1:13,0:13:26:26,0,95	0/0:13,0:13:24.01:0,24,247	0/0:17,0:16:36.03:0,36,392	0/0:34,0:34:53.92:0,54,593	0/0:18,0:18:45.07:0,45,473	0/0:25,0:25:3.90:0,4,208	1/1:18,0:17:23.94:238,24,0	0/1:13,0:12:13.48:13,0,111
chr10	83123362	.	T	TGG	1486.69	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=1.822;DP=422;FS=0.497;HRun=7;HaplotypeScore=54.4401;InbreedingCoeff=0.9536;MQ=81.21;MQ0=0;MQRankSum=-2.913;QD=13.64;ReadPosRankSum=-0.606;VQSLOD=-0.2517;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:30:51.17:836,51,0	0/0:6,0:6:15.03:0,15,164	0/0:17,0:17:35.74:0,36,381	0/0:27,0:25:6.07:0,6,424	0/0:20,0:20:48.07:0,48,542	0/0:16,0:16:45.13:0,45,524	1/1:7,14:21:27.09:443,27,0	1/1:1,0:20:40.35:155,40,0	0/0:25,0:25:69.17:0,69,789	0/0:11,0:11:30.07:0,30,340	0/0:6,0:6:9.02:0,9,105	0/0:21,0:21:54.14:0,54,618	0/0:18,0:18:48.14:0,48,559	0/0:13,0:13:30.02:0,30,349	0/0:16,0:16:42.11:0,42,479	0/0:11,0:11:30.07:0,30,339	0/0:8,0:8:24.07:0,24,279	1/1:1,0:10:14.97:53,15,0	1/1:3,0:10:18.31:81,18,0	1/1:2,0:7:12.35:43,12,0	0/0:29,0:29:78.21:0,78,897	0/0:8,0:8:21.06:0,21,244	0/0:7,0:6:18.05:0,18,210	0/0:11,0:11:21.05:0,21,243	0/0:11,0:11:33.07:0,33,371	0/0:11,0:11:27.08:0,27,315	1/1:1,0:11:19.96:70,20,0	0/0:20,0:20:42.12:0,42,489
chr10	83124769	.	GACAC	G	162.51	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=-0.009;DP=391;FS=0.000;HRun=0;HaplotypeScore=70.0242;InbreedingCoeff=0.4142;MQ=71.94;MQ0=22;MQRankSum=0.686;QD=7.39;ReadPosRankSum=1.867;VQSLOD=1.9320;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:3.01:0,3,52	0/0:2,0:4:5.73:0,6,34	0/0:48,0:19:0.47:0,0,1	./.	1/1:3,1:4:3.01:47,3,0	0/0:9,0:9:6.02:0,6,125	0/0:14,0:16:12.51:0,13,238	0/0:7,0:7:3.01:0,3,69	0/0:6,0:5:3.01:0,3,71	0/0:8,0:6:2.97:0,3,20	0/0:5,0:4:3:0,3,25	0/0:9,0:11:17.53:0,18,277	1/1:6,4:9:9.03:140,9,0	0/0:11,0:11:8.17:0,8,35	1/1:4,1:5:3.01:47,3,0	0/0:9,0:9:9.03:0,9,212	0/0:29,0:29:38.57:0,39,719	0/0:20,0:20:26.78:0,27,414	0/0:5,0:5:3.01:0,3,52	0/0:6,0:6:3.01:0,3,61	0/0:38,0:38:18.02:0,18,254	1/1:2,1:3:3.01:47,3,0	0/0:8,0:6:3.01:0,3,71	0/0:31,0:29:41.50:0,42,810	0/0:3,0:2:0.89:0,1,2	0/0:7,0:7:3:0,3,27	0/0:5,0:5:12.04:0,12,208	./.
chr10	83124815	.	C	CAG	1206.21	PASS	AB=0.850;AC=19;AF=0.352;AN=54;BaseQRankSum=-2.356;DP=281;FS=1.394;HRun=0;HaplotypeScore=52.8553;InbreedingCoeff=0.5881;MQ=65.98;MQ0=15;MQRankSum=-0.104;QD=11.07;ReadPosRankSum=-0.679;VQSLOD=3.2004;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:11:3.01:44,3,0	0/0:3,0:3:6:0,6,53	0/0:36,0:19:22.23:0,22,221	0/0:26,0:19:39.86:0,40,332	0/0:2,0:1:3:0,3,29	0/1:8,0:8:13.72:14,0,24	1/1:15,0:15:12.50:199,13,0	1/1:6,0:5:11.99:103,12,0	0/0:3,0:2:5.75:0,6,59	0/0:8,0:8:18.67:0,19,117	0/0:5,0:4:8.92:0,9,62	0/1:5,0:5:8.24:8,0,135	0/0:10,0:9:16.17:0,16,125	0/0:5,0:5:11.32:0,11,78	0/0:8,0:8:17.82:0,18,128	0/0:9,0:9:19.30:0,19,214	0/0:23,0:22:58.75:0,59,543	1/1:2,12:14:8.83:413,9,0	1/1:7,0:7:20.98:208,21,0	1/1:2,0:2:3:26,3,0	0/1:5,22:27:12.79:53,0,13	0/0:3,0:3:5.98:0,6,50	0/0:6,0:6:11.91:0,12,107	0/0:20,0:20:44.83:0,45,529	0/0:5,0:4:7.71:0,8,46	1/1:6,0:6:18.01:162,18,0	1/1:5,0:6:17.95:160,18,0	./.
chr10	83125958	.	TAC	T	6448.78	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.164;DP=794;FS=5.591;HRun=0;HaplotypeScore=119.9334;InbreedingCoeff=0.9971;MQ=81.29;MQ0=0;MQRankSum=-2.923;QD=34.30;ReadPosRankSum=-1.492;VQSLOD=6.6678;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,49:50:99:1722,123,0	0/0:8,0:8:15.05:0,15,270	0/0:27,0:27:78.22:0,78,1276	0/0:35,0:34:99:0,99,1657	0/0:37,0:37:96.33:0,96,1709	0/0:28,0:28:75.26:0,75,1323	1/1:6,22:28:57.19:798,57,0	1/1:3,22:25:66.16:884,66,0	0/0:26,0:26:78.22:0,78,1351	0/0:27,0:27:78.27:0,78,1392	0/0:25,0:25:66.23:0,66,1172	0/0:27,0:27:72.25:0,72,1295	0/0:34,0:34:96.33:0,96,1715	0/0:32,0:32:93.32:0,93,1660	0/0:35,0:35:99:0,99,1767	0/0:34,0:34:93.32:0,93,1660	0/0:27,0:27:81.28:0,81,1438	1/1:1,21:22:54.18:756,54,0	1/1:2,17:19:51.15:693,51,0	1/1:2,18:20:54.18:756,54,0	0/0:42,0:42:99:0,120,2120	0/0:24,0:24:69.22:0,69,1200	0/0:27,0:27:72.25:0,72,1282	0/0:38,0:38:99:0,102,1822	0/0:27,0:27:78.25:0,78,1369	0/0:28,0:28:84.28:0,84,1472	1/1:1,23:24:60.20:840,60,0	0/0:18,0:18:54.19:0,54,972
chr10	83126353	.	CG	C	1248.36	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.463;DP=804;FS=5.931;HRun=4;HaplotypeScore=75.8474;InbreedingCoeff=0.8495;MQ=73.82;MQ0=0;MQRankSum=-2.467;QD=29.03;ReadPosRankSum=2.618;VQSLOD=3.7872;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,1787	0/0:14,0:14:39.13:0,39,544	0/0:19,0:19:48.15:0,48,655	0/0:18,0:18:18.50:0,18,486	0/0:17,0:17:51.16:0,51,694	0/0:26,0:26:78.26:0,78,1087	0/0:30,0:30:81.24:0,81,1098	0/0:24,0:24:60.17:0,60,786	0/0:38,0:38:99:0,108,1510	0/0:30,0:30:84.28:0,84,1175	0/0:18,0:18:51.16:0,51,697	0/0:48,0:48:99:0,141,1921	0/0:32,0:32:90.30:0,90,1259	0/0:27,0:27:78.26:0,78,1084	0/0:49,0:49:99:0,138,1911	0/0:32,0:32:96.29:0,96,1307	0/0:32,0:32:93.29:0,93,1281	0/0:26,0:26:78.26:0,78,1092	0/0:21,0:21:51.15:0,51,696	0/0:28,0:28:75.25:0,75,1049	0/0:34,0:34:93.31:0,93,1299	0/0:30,0:30:84.26:0,84,1143	0/0:16,0:16:48.16:0,48,668	0/0:43,0:43:99:0,129,1805	0/0:23,0:23:66.20:0,66,904	1/1:3,26:29:0.28:851,0,0	0/0:42,0:42:99:0,120,1672	1/1:0,14:14:42.13:504,42,0
chr10	83128031	.	CCACACACA	C	194.99	PASS	AB=0.929;AC=5;AF=0.104;AN=48;BaseQRankSum=2.121;DP=573;FS=16.288;HRun=0;HaplotypeScore=145.8823;InbreedingCoeff=0.4122;MQ=52.45;MQ0=29;MQRankSum=-2.427;QD=2.64;ReadPosRankSum=-1.065;VQSLOD=1.2933;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,8:30:5.80:141,6,0	0/0:6,0:5:12.04:0,12,383	0/0:35,0:17:0.94:0,1,1	./.	0/0:15,0:15:6.02:0,6,127	0/0:28,0:25:8.81:0,9,366	1/1:23,7:28:6.02:149,6,0	./.	0/0:18,0:18:9.03:0,9,157	0/0:17,0:17:15.04:0,15,368	./.	0/0:14,0:14:6.02:0,6,244	0/0:11,0:14:12.02:0,12,275	0/0:19,0:16:6.02:0,6,244	0/0:26,0:30:9.03:0,9,309	0/0:18,0:16:3.01:0,3,122	0/0:25,0:23:24.08:0,24,752	0/0:17,0:16:20.57:0,21,260	0/0:13,0:10:12.01:0,12,332	./.	0/0:39,0:37:39.06:0,39,1028	0/0:20,0:20:3.01:0,3,66	0/0:17,0:16:5.95:0,6,140	0/0:24,0:23:24.08:0,24,881	0/0:19,0:19:12.04:0,12,384	0/0:13,0:15:18.02:0,18,270	0/0:16,0:16:12.04:0,12,233	0/1:12,0:13:6.76:7,0,40
chr10	83128078	.	CACAT	C	722.96	PASS	AB=1.000;AC=14;AF=0.269;AN=52;BaseQRankSum=0.723;DP=478;FS=3.217;HRun=0;HaplotypeScore=94.7366;InbreedingCoeff=0.4027;MQ=38.45;MQ0=106;MQRankSum=-3.688;QD=4.85;ReadPosRankSum=-3.593;VQSLOD=0.7263;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:17:4.85:5,0,38	0/0:6,0:6:14.98:0,15,240	./.	./.	0/0:14,0:10:14.99:0,15,186	0/0:19,0:14:11.14:0,11,260	1/1:26,0:18:5.27:21,5,0	1/1:19,0:13:35.82:275,36,0	0/1:10,0:8:7.83:8,0,63	0/0:15,0:14:29.53:0,30,264	0/0:6,0:6:3:0,3,25	0/0:21,0:17:29.85:0,30,445	0/0:19,0:14:20.90:0,21,264	0/0:13,0:10:14.92:0,15,265	0/0:23,0:22:15:0,15,238	0/0:16,0:14:21:0,21,299	0/0:24,0:22:26.90:0,27,408	1/1:9,8:11:8.85:148,9,0	0/1:13,0:12:9.12:168,0,9	0/1:5,0:5:4.71:41,0,5	0/0:35,0:28:51.33:0,51,623	0/0:16,0:15:12.01:0,12,164	0/0:13,0:12:9.30:0,9,134	0/0:34,0:23:42.42:0,42,736	0/0:19,0:17:32.97:0,33,437	0/1:9,0:8:7.38:7,0,96	1/1:13,0:13:21.12:180,21,0	0/1:15,0:10:31.03:31,0,131
chr10	83128555	.	T	TA	4178.04	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=3.041;DP=610;FS=10.661;HRun=10;HaplotypeScore=81.6314;InbreedingCoeff=0.9637;MQ=49.83;MQ0=0;MQRankSum=-0.497;QD=16.51;ReadPosRankSum=-2.257;VQSLOD=2.6213;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:38:65.37:327,65,0	0/0:3,0:3:5.99:0,6,49	0/0:9,0:6:17.66:0,18,133	0/0:6,0:3:8.99:0,9,74	0/0:34,1:37:40.87:0,41,509	0/0:19,1:20:21.76:0,22,363	1/1:3,0:13:17.55:86,18,0	1/1:6,21:27:16.39:549,16,0	0/0:25,0:26:61.83:0,62,487	0/0:24,0:24:56.91:0,57,468	0/0:23,0:23:50.90:0,51,418	0/0:16,0:16:41.95:0,42,345	0/0:17,0:17:44.90:0,45,363	0/0:12,0:13:34.98:0,35,274	0/0:25,0:24:50.87:0,51,413	0/0:26,0:26:71.72:0,72,566	0/0:31,0:34:61.39:0,61,564	1/1:4,20:26:9.99:540,10,0	1/1:4,19:22:38.13:567,38,0	1/1:6,25:31:47.44:685,47,0	1/1:1,0:16:34.16:171,34,0	0/0:17,0:17:41.92:0,42,341	0/0:20,0:19:41.26:0,41,306	0/0:24,0:24:42.40:0,42,483	0/0:16,1:17:32.90:0,33,266	1/1:8,0:25:48.96:271,49,0	1/1:4,27:32:56.31:763,56,0	1/1:4,1:22:42.69:218,43,0
chr10	83129883	.	T	TA	3576.84	PASS	AB=0.929;AC=11;AF=0.196;AN=56;BaseQRankSum=-11.967;DP=745;FS=7.401;HRun=9;HaplotypeScore=69.8909;InbreedingCoeff=0.8869;MQ=74.35;MQ0=0;MQRankSum=-0.956;QD=22.36;ReadPosRankSum=-1.850;VQSLOD=3.7467;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:95.90:0,96,824	0/0:12,0:12:32.97:0,33,281	0/0:24,0:24:29.39:0,29,316	0/1:12,1:13:22.23:22,0,86	0/0:38,0:38:71.82:0,72,602	0/0:18,0:18:47.83:0,48,401	0/0:15,0:15:41.99:0,42,364	1/1:6,30:36:90.23:986,90,0	0/0:22,0:22:59.98:0,60,521	0/0:37,0:37:99:0,108,934	0/0:26,0:26:68.95:0,69,590	0/0:25,0:25:62.97:0,63,547	0/0:15,0:15:41.98:0,42,365	0/0:27,0:27:74.94:0,75,643	0/0:33,0:33:89.91:0,90,766	0/0:26,0:26:62.98:0,63,547	0/0:38,0:38:99:0,105,905	1/1:3,14:17:25.26:355,25,0	1/1:6,14:20:42.08:452,42,0	1/1:9,34:43:62.57:1008,63,0	0/0:27,0:27:59.82:0,60,504	0/0:27,0:27:74.94:0,75,643	0/0:28,0:28:71.97:0,72,625	0/0:26,1:27:38.80:0,39,566	0/0:30,0:31:85.98:0,86,726	0/0:36,0:36:95.93:0,96,826	1/1:8,23:31:49.05:753,49,0	0/0:19,0:19:50.98:0,51,443
chr10	83134190	.	AC	A	4095.62	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.087;DP=614;FS=1.764;HRun=2;HaplotypeScore=60.7692;InbreedingCoeff=0.9775;MQ=69.70;MQ0=0;MQRankSum=0.422;QD=34.13;ReadPosRankSum=0.975;VQSLOD=3.8669;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.23:0,87,1218	0/0:4,0:4:9.02:0,9,115	0/0:9,0:9:15.02:0,15,182	0/0:10,0:9:15.02:0,15,203	0/0:8,0:8:24.04:0,24,299	0/0:13,0:13:39.12:0,39,556	0/0:43,0:43:99:0,126,1849	1/1:2,19:21:48.16:623,48,0	0/0:26,0:26:78.26:0,78,1169	0/0:18,0:18:42.11:0,42,605	0/0:10,0:10:30.09:0,30,424	0/0:38,0:38:99:0,111,1663	0/0:26,0:26:78.25:0,78,1143	0/0:30,0:30:87.28:0,87,1283	0/0:29,0:29:87.29:0,87,1303	0/0:17,0:17:48.15:0,48,700	0/0:31,0:31:93.31:0,93,1389	1/1:0,27:27:78.25:1010,78,0	1/1:0,20:20:57.15:710,57,0	1/1:1,13:14:36.12:467,36,0	0/0:47,0:47:99:0,138,2038	0/0:20,0:20:54.15:0,54,776	0/0:9,0:9:27.08:0,27,378	0/0:30,0:30:87.28:0,87,1280	0/0:22,0:22:63.17:0,63,866	0/0:17,0:17:48.16:0,48,720	1/1:0,38:38:98.95:1285,99,0	0/0:7,0:7:21.07:0,21,315
chr10	83137045	.	TACACACACAC	T	1830.43	PASS	AB=0.692;AC=10;AF=0.192;AN=52;BaseQRankSum=7.524;DP=594;FS=8.837;HRun=0;HaplotypeScore=157.7775;InbreedingCoeff=0.6409;MQ=62.95;MQ0=14;MQRankSum=-7.304;QD=13.87;ReadPosRankSum=-0.705;VQSLOD=1.9644;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,3:26:17.95:358,18,0	0/0:5,0:5:9.03:0,9,402	./.	./.	0/0:20,0:20:27.09:0,27,1088	0/0:12,0:12:12.03:0,12,355	1/1:16,12:28:14.92:316,15,0	0/0:21,0:21:0:0,0,0	0/0:21,0:21:39.12:0,39,1455	0/0:25,0:23:29.45:0,29,888	0/0:9,0:9:18.53:0,19,831	0/0:17,0:26:18.53:0,19,573	0/0:21,0:22:33.58:0,34,1546	0/0:21,0:21:27.08:0,27,1062	0/0:33,0:33:48.16:0,48,2121	0/0:16,0:17:33.10:0,33,1257	0/0:31,0:31:60.63:0,61,2422	0/1:10,7:15:56.26:343,0,56	1/1:14,2:16:3.35:175,3,0	1/1:8,7:16:8.74:73,9,0	0/0:38,0:37:58.73:0,59,2233	0/0:19,0:19:30.10:0,30,1248	0/0:14,0:14:21.07:0,21,902	0/0:29,0:34:47.83:0,48,1967	0/0:15,0:14:21.06:0,21,766	0/0:19,0:18:30.98:0,31,986	0/1:14,12:27:20.88:717,0,21	0/0:6,0:6:15.05:0,15,587
chr10	83139538	.	GC	G	1025.43	PASS	AB=0.523;AC=3;AF=0.054;AN=56;BaseQRankSum=6.480;DP=736;FS=3.437;HRun=1;HaplotypeScore=79.3585;InbreedingCoeff=0.6396;MQ=88.33;MQ0=1;MQRankSum=-2.030;QD=32.04;ReadPosRankSum=1.458;VQSLOD=3.4490;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,175,2728	0/0:5,0:5:15.05:0,15,240	0/0:28,0:28:81.09:0,81,1151	0/0:24,0:24:69.16:0,69,1035	0/0:27,0:27:81.25:0,81,1243	0/0:27,0:27:81.24:0,81,1244	0/0:27,0:27:81.28:0,81,1291	0/0:36,0:36:99:0,105,1600	0/0:26,0:26:78.24:0,78,1221	0/0:29,0:28:81.25:0,81,1268	0/0:13,0:13:39.13:0,39,608	0/0:21,0:21:63.20:0,63,984	0/0:34,0:34:99:0,102,1577	0/0:32,0:32:96.29:0,96,1481	0/0:23,0:22:66.18:0,66,983	0/0:27,0:27:81.23:0,81,1222	0/0:44,0:44:99:0,132,2078	0/0:27,0:27:81.25:0,81,1268	0/0:34,0:34:93.27:0,93,1379	0/0:20,0:20:57.17:0,57,856	0/0:38,0:38:99:0,114,1797	0/0:29,0:29:84.26:0,84,1256	0/0:12,0:12:36.11:0,36,551	0/0:27,0:27:81.28:0,81,1294	0/0:17,0:17:48.16:0,48,766	0/1:2,21:23:26.71:795,0,27	0/0:18,0:18:54.16:0,54,827	1/1:0,9:9:24.08:335,24,0
chr10	83139767	.	G	GC	628.38	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.737;DP=584;FS=0.000;HRun=7;HaplotypeScore=60.1217;InbreedingCoeff=0.8847;MQ=74.37;MQ0=0;MQRankSum=-1.748;QD=22.44;ReadPosRankSum=-0.664;VQSLOD=2.8888;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,114,1089	0/0:10,0:10:30.05:0,30,289	0/0:14,0:14:23.83:0,24,216	0/0:18,0:18:5.10:0,5,180	0/0:24,0:24:63.05:0,63,590	0/0:19,0:19:54.09:0,54,521	0/0:31,0:31:81.13:0,81,782	0/0:16,0:16:36.05:0,36,343	0/0:19,0:19:54.07:0,54,515	0/0:18,0:18:33.03:0,33,315	0/0:17,0:17:48.06:0,48,458	0/0:21,0:21:51.08:0,51,492	0/0:21,0:21:50.89:0,51,485	0/0:26,0:26:75.12:0,75,724	0/0:23,0:23:66.11:0,66,637	0/0:22,0:22:60.10:0,60,579	0/0:27,0:25:72.11:0,72,694	0/0:36,0:36:99:0,99,940	0/0:22,0:22:60.01:0,60,555	0/0:10,0:10:27.04:0,27,260	1/1:2,26:28:60.18:723,60,0	0/0:24,0:24:65.97:0,66,631	0/0:11,0:11:30.05:0,30,290	0/0:24,0:24:63.08:0,63,602	0/0:17,0:16:45.07:0,45,434	0/0:15,0:15:42.07:0,42,405	0/0:18,0:18:54.09:0,54,521	0/0:9,0:9:24.04:0,24,232
chr10	83141124	.	AGCT	A	6639.12	PASS	AB=0.553;AC=15;AF=0.268;AN=56;BaseQRankSum=14.108;DP=712;FS=8.409;HRun=0;HaplotypeScore=131.6790;InbreedingCoeff=0.9080;MQ=79.42;MQ0=0;MQRankSum=-15.734;QD=42.56;ReadPosRankSum=-3.168;VQSLOD=5.4694;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,144,3230	0/0:9,0:9:27.09:0,27,623	0/0:23,0:23:59.78:0,60,986	0/0:19,0:19:47.61:0,48,775	0/0:34,0:34:96.30:0,96,2097	0/0:18,0:18:54.19:0,54,1245	0/0:35,0:35:99:0,105,2390	1/1:2,24:26:72.25:1223,72,0	0/0:29,0:29:84.29:0,84,1909	0/0:25,0:25:72.25:0,72,1661	0/0:21,0:21:63.22:0,63,1452	0/0:25,0:25:75.24:0,75,1683	0/0:24,0:24:72.23:0,72,1607	0/0:21,0:21:60.21:0,60,1384	0/0:34,0:34:99:0,102,2262	0/0:34,0:34:99:0,102,2279	0/0:52,0:52:99:0,154,3473	1/1:2,18:20:42.14:716,42,0	1/1:3,8:11:21.07:358,21,0	1/1:0,20:20:54.18:920,54,0	1/1:0,17:17:42.14:713,42,0	0/0:20,0:20:57.18:0,57,1249	0/0:30,0:30:90.31:0,90,2074	0/0:31,0:31:87.28:0,87,1937	0/0:21,0:21:63.22:0,63,1426	0/1:5,21:26:69.09:976,0,69	1/1:3,20:23:63.22:1070,63,0	1/1:0,13:13:39.13:664,39,0
chr10	83143106	.	C	CCATCACTCTTCCTTTGTCCTTG	1648.12	PASS	AB=0.675;AC=20;AF=0.909;AN=22;BaseQRankSum=-2.200;DP=37;FS=6.560;HRun=0;HaplotypeScore=22.8274;InbreedingCoeff=-0.2544;MQ=135.48;MQ0=0;MQRankSum=-1.435;QD=61.04;ReadPosRankSum=-0.574;VQSLOD=1.0790;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:3.01:47,3,0	./.	0/1:3,1:6:45.87:819,0,46	0/1:3,0:4:14.28:451,0,14	./.	./.	./.	1/1:2,0:2:6.01:133,6,0	./.	1/1:1,0:1:3.01:111,3,0	1/1:1,0:1:2.99:24,3,0	1/1:2,0:2:2.98:21,3,0	1/1:2,0:2:5.93:40,6,0	1/1:2,0:2:5.96:45,6,0	1/1:1,0:1:2.97:20,3,0	./.	./.	./.	./.	./.	1/1:1,0:1:2.98:22,3,0	./.	./.	./.	./.	./.	./.	./.
chr10	83193322	.	TCTC	T	362.93	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.224;DP=323;FS=2.516;HRun=0;HaplotypeScore=48.3956;InbreedingCoeff=0.5338;MQ=78.58;MQ0=12;MQRankSum=-2.053;QD=9.81;ReadPosRankSum=3.389;VQSLOD=2.4784;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,15:19:5.39:149,5,0	0/0:3,0:3:3.01:0,3,39	0/0:31,0:14:17.06:0,17,420	0/0:42,0:22:24.80:0,25,340	0/0:5,0:5:2.99:0,3,24	0/0:13,0:12:17.98:0,18,248	1/1:3,15:18:20.43:322,20,0	0/0:16,0:16:33.06:0,33,467	0/0:8,0:8:11.90:0,12,91	0/0:7,0:7:14.84:0,15,175	0/0:4,0:4:6.49:0,6,96	0/0:10,0:10:23.88:0,24,274	0/0:4,0:4:11.92:0,12,141	0/0:1,0:1:2.90:0,3,16	0/0:6,0:6:12.04:0,12,193	0/0:12,0:11:29.96:0,30,428	0/0:11,0:10:26.96:0,27,364	0/0:7,0:5:11.71:0,12,57	0/0:10,0:10:18.76:0,19,157	0/0:11,0:11:17.90:0,18,170	0/0:22,0:22:39.06:0,39,622	0/0:4,0:4:6.43:0,6,45	0/0:6,0:6:2.99:0,3,25	0/0:13,0:13:36.05:0,36,577	0/0:6,0:6:5.90:0,6,37	0/0:9,0:9:14.51:0,15,134	0/0:12,0:12:17.92:0,18,191	0/0:13,0:13:35.93:0,36,334
chr10	83193344	.	C	CCCT	58.65	PASS	AB=0.844;AC=3;AF=0.056;AN=54;BaseQRankSum=1.530;DP=326;FS=3.301;HRun=0;HaplotypeScore=60.9730;InbreedingCoeff=-0.0292;MQ=63.50;MQ0=19;MQRankSum=0.801;QD=0.98;ReadPosRankSum=-0.382;VQSLOD=1.4281;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:4.85:0,5,325	0/0:4,0:4:9.03:0,9,148	0/1:43,0:8:26.93:27,0,105	0/0:67,0:29:35.21:0,35,508	0/0:5,0:5:5.99:0,6,49	0/0:9,0:8:18.02:0,18,255	0/0:15,0:15:32.98:0,33,449	0/0:7,0:7:15.01:0,15,221	0/0:7,0:6:12.40:0,12,135	0/0:7,0:6:15.05:0,15,222	0/0:7,0:7:9.50:0,10,151	0/0:6,0:6:15.52:0,16,223	0/0:2,0:2:3.01:0,3,50	0/0:9,0:8:18.06:0,18,260	0/0:7,0:7:15.03:0,15,216	0/0:11,0:10:20.99:0,21,293	0/0:9,0:8:21.07:0,21,309	0/1:1,6:7:9.17:119,0,9	0/0:9,0:9:24.02:0,24,349	0/0:6,0:6:10.39:0,10,149	0/0:14,0:14:42.08:0,42,670	0/0:6,0:6:9.63:0,10,93	0/0:11,0:10:17.87:0,18,190	0/0:11,0:11:26.91:0,27,316	0/0:14,0:14:26.83:0,27,295	0/1:9,0:7:2.40:2,0,85	0/0:7,0:6:12.04:0,12,168	./.
chr10	83193810	.	A	ATGTGCG	736.97	PASS	AB=0.987;AC=6;AF=0.107;AN=56;BaseQRankSum=6.091;DP=863;FS=2.345;HRun=0;HaplotypeScore=173.7272;InbreedingCoeff=0.6054;MQ=56.39;MQ0=16;MQRankSum=-1.738;QD=5.58;ReadPosRankSum=-2.651;VQSLOD=2.5089;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,27:45:12.04:213,12,0	0/0:7,0:7:21.07:0,21,409	0/0:56,0:12:18.76:0,19,177	0/0:81,0:30:42.23:0,42,455	0/0:24,0:24:56.94:0,57,924	0/0:19,0:19:35.80:0,36,589	1/1:9,28:39:17.84:344,18,0	0/0:20,0:20:51.07:0,51,540	0/0:27,0:27:69.13:0,69,1208	0/0:28,0:28:69.60:0,70,1154	0/0:16,0:16:35.67:0,36,595	0/0:31,0:31:83.73:0,84,1355	0/0:23,0:23:57:0,57,901	0/0:28,0:28:71.49:0,71,1097	0/0:27,0:27:72.15:0,72,1258	0/0:21,0:21:54.63:0,55,1079	0/0:41,0:41:95.66:0,96,1743	0/0:24,0:24:57.03:0,57,956	0/0:14,0:14:33.06:0,33,456	0/0:29,0:28:71.75:0,72,1267	0/0:88,0:86:99:0,204,3355	0/0:16,0:16:35.88:0,36,420	0/0:29,0:29:43.98:0,44,829	0/0:47,0:47:99:0,120,2109	0/0:18,0:17:36.07:0,36,591	0/1:37,0:38:99:268,0,244	0/0:16,0:15:39.02:0,39,648	0/1:9,0:9:43.50:43,0,56
chr10	83194388	.	T	TG	1142.16	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.349;DP=626;FS=2.093;HRun=8;HaplotypeScore=82.1333;InbreedingCoeff=0.9932;MQ=81.91;MQ0=0;MQRankSum=-2.295;QD=19.36;ReadPosRankSum=-0.837;VQSLOD=3.3226;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:29:28.05:564,28,0	0/0:13,0:13:36.01:0,36,326	0/0:20,0:18:41.63:0,42,371	0/0:24,0:24:47.75:0,48,484	0/0:19,0:19:48.02:0,48,439	0/0:23,0:23:60.03:0,60,548	1/1:2,28:30:38.73:700,39,0	0/0:30,0:30:50.90:0,51,457	0/0:24,0:24:62.57:0,63,576	0/0:18,0:18:39.01:0,39,357	0/0:21,1:22:54.02:0,54,494	0/0:21,0:21:57.02:0,57,522	0/0:20,0:20:48:0,48,434	0/0:18,0:18:45.02:0,45,412	0/0:28,0:28:72.03:0,72,659	0/0:16,0:16:45.02:0,45,412	0/0:32,0:32:87.03:0,87,795	0/0:0,0:24:46.85:0,47,137	0/0:24,0:25:67.99:0,68,598	0/0:20,0:20:51.03:0,51,467	0/0:29,0:29:78.02:0,78,709	0/0:21,0:21:53.71:0,54,484	0/0:25,0:25:60.01:0,60,544	0/0:28,0:28:72.01:0,72,653	0/0:14,0:14:38.97:0,39,349	0/0:6,0:25:41.70:0,42,141	0/0:20,0:20:54:0,54,487	0/0:0,0:8:16.30:0,16,48
chr10	83194560	.	TA	T	1511.80	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.068;DP=536;FS=3.552;HRun=10;HaplotypeScore=59.7019;InbreedingCoeff=0.9733;MQ=79.19;MQ0=0;MQRankSum=-1.101;QD=19.14;ReadPosRankSum=2.545;VQSLOD=4.7187;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,36:41:99:900,106,0	0/0:7,0:7:21.06:0,21,232	0/0:22,0:21:36.30:0,36,345	0/0:17,0:14:10.17:0,10,85	0/0:15,0:15:39.09:0,39,423	0/0:18,0:18:51.11:0,51,547	1/1:4,15:19:38.99:339,39,0	0/0:32,0:32:78.19:0,78,849	0/0:15,0:15:39.09:0,39,423	0/0:15,0:15:36.10:0,36,398	0/0:22,0:22:54.08:0,54,552	0/0:20,0:20:19.10:0,19,438	0/0:17,1:18:25.08:0,25,505	0/0:15,0:15:42.10:0,42,457	0/0:16,0:16:45.12:0,45,498	0/0:16,1:17:19.06:0,19,432	0/0:29,1:30:55.14:0,55,825	1/1:1,18:19:47.85:416,48,0	0/0:26,0:26:72.18:0,72,782	0/0:18,0:18:45.04:0,45,459	0/0:16,0:16:39.07:0,39,414	0/0:17,1:18:28.98:0,29,445	0/0:12,0:12:24.01:0,24,251	0/0:15,0:15:32.96:0,33,347	0/0:15,0:15:42.09:0,42,454	0/0:17,0:17:39.11:0,39,431	0/0:32,1:33:61.07:0,61,868	0/0:5,0:6:17.88:0,18,180
chr10	83194900	.	AAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	A	1044.64	PASS	AB=0.903;AC=8;AF=0.148;AN=54;BaseQRankSum=2.775;DP=461;FS=10.633;HRun=0;HaplotypeScore=302.0855;InbreedingCoeff=0.5479;MQ=56.37;MQ0=19;MQRankSum=-1.323;QD=10.04;ReadPosRankSum=-2.056;VQSLOD=0.7658;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:14.03:0,14,645	0/0:5,0:5:12.04:0,12,1057	./.	0/0:16,0:11:0:0,0,0	0/0:13,0:12:8.80:0,9,448	0/0:9,0:8:21.04:0,21,1008	0/0:26,0:25:33.94:0,34,1455	0/1:23,0:23:21.72:44,0,22	0/0:14,0:13:23.98:0,24,1915	0/0:19,0:17:27.08:0,27,1566	0/0:25,0:24:24.08:0,24,1245	0/0:15,0:15:17.89:0,18,1436	0/0:5,0:4:6:0,6,203	0/0:17,0:16:17.94:0,18,1100	0/0:21,0:20:15.12:0,15,733	0/0:11,0:11:21.04:0,21,1169	0/0:13,0:9:9.03:0,9,469	0/0:14,0:13:21.03:0,21,827	0/1:19,6:23:99:493,0,313	1/1:7,11:17:11.99:299,12,0	1/1:12,0:12:11.88:114,12,0	0/0:16,0:15:17.95:0,18,1327	0/0:12,0:11:14.94:0,15,996	0/0:15,0:15:17.96:0,18,934	0/0:15,0:15:24.29:0,24,1611	0/0:32,0:30:49.20:0,49,819	1/1:13,13:25:3.48:231,3,0	0/0:10,0:9:14.69:0,15,205
chr10	83196006	.	G	GGGAT	2021.86	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.338;DP=573;FS=11.400;HRun=0;HaplotypeScore=96.3175;InbreedingCoeff=0.9610;MQ=81.51;MQ0=0;MQRankSum=-4.047;QD=69.72;ReadPosRankSum=1.958;VQSLOD=5.3936;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,2109	0/0:5,0:5:15.04:0,15,265	0/0:13,0:13:32.99:0,33,545	0/0:20,0:20:43.95:0,44,786	0/0:13,0:13:36.12:0,36,718	0/0:14,0:14:42.14:0,42,839	0/0:36,0:36:99:0,105,2096	0/0:18,0:18:48.16:0,48,911	0/0:28,0:28:84.26:0,84,1624	0/0:19,0:19:57.19:0,57,1100	0/0:8,0:8:24.08:0,24,465	0/0:20,0:20:60.19:0,60,1163	0/0:12,0:12:36.11:0,36,681	0/0:29,0:29:87.30:0,87,1736	0/0:23,0:23:69.22:0,69,1315	0/0:31,0:31:93.32:0,93,1853	0/0:25,0:25:72.21:0,72,1365	1/1:5,23:29:78.27:2117,78,0	0/0:17,0:17:48.15:0,48,877	0/0:13,0:13:39.12:0,39,720	0/0:61,0:61:99:0,178,3387	0/0:7,0:7:18.06:0,18,359	0/0:8,0:8:21.07:0,21,419	0/0:33,0:33:99:0,99,1951	0/0:7,0:7:18.06:0,18,359	0/0:21,0:21:63.22:0,63,1256	0/0:18,0:18:54.19:0,54,1073	0/0:8,0:8:24.05:0,24,395
chr10	83198855	.	G	GA	1191.58	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=1.984;DP=528;FS=0.622;HRun=7;HaplotypeScore=81.9394;InbreedingCoeff=0.9238;MQ=55.88;MQ0=15;MQRankSum=-5.802;QD=17.78;ReadPosRankSum=-1.841;VQSLOD=3.1747;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,34:46:77.60:902,78,0	0/0:8,0:8:15.02:0,15,145	0/0:10,0:3:8.73:0,9,62	./.	0/0:22,0:21:42.06:0,42,405	0/0:21,0:20:48.06:0,48,458	1/1:7,13:19:35.95:410,36,0	0/0:13,0:12:33.05:0,33,316	0/0:23,0:23:36:0,36,347	0/0:12,0:11:23.44:0,23,209	0/0:8,0:7:12.02:0,12,116	0/0:23,0:23:29.33:0,29,366	0/0:19,0:18:26.84:0,27,260	0/0:12,0:12:23.06:0,23,208	0/0:22,0:22:46.28:0,46,448	0/0:15,0:15:36.02:0,36,339	0/0:41,0:41:99:0,105,982	0/0:34,0:34:81:0,81,770	0/0:16,0:15:30.02:0,30,282	0/0:18,0:18:39.03:0,39,368	0/0:25,0:24:45.02:0,45,427	0/0:12,0:10:18.02:0,18,171	0/0:16,0:15:30.04:0,30,290	0/0:35,0:35:81.07:0,81,780	0/0:12,0:12:27.04:0,27,261	0/0:19,0:19:45.06:0,45,434	0/0:14,0:14:33.03:0,33,318	0/0:6,0:5:11.98:0,12,116
chr10	83198870	.	CA	C	1264.39	PASS	AB=0.856;AC=18;AF=0.321;AN=56;BaseQRankSum=1.793;DP=538;FS=0.847;HRun=14;HaplotypeScore=68.0062;InbreedingCoeff=0.5915;MQ=61.27;MQ0=11;MQRankSum=2.079;QD=5.88;ReadPosRankSum=-1.192;VQSLOD=2.1489;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:39:76.13:0,76,490	0/0:7,0:7:12.01:0,12,111	0/0:21,0:10:25.51:0,26,178	0/0:9,0:6:8.24:0,8,86	0/0:22,1:22:18.43:0,18,302	0/0:16,1:17:12.33:0,12,245	0/0:9,0:22:46.32:0,46,292	1/1:6,15:21:41.56:284,42,0	0/1:13,4:18:27.84:28,0,196	0/0:14,0:15:38.84:0,39,337	0/0:7,0:8:14.85:0,15,126	0/0:16,0:17:49.39:0,49,409	0/0:17,1:17:15.46:0,15,286	0/0:12,1:13:3.44:0,3,174	0/1:17,3:21:13.89:14,0,289	0/0:13,0:14:18.20:0,18,288	0/1:31,7:41:8.03:8,0,688	0/0:28,1:32:69.05:0,69,728	1/1:5,16:21:20.02:252,20,0	1/1:1,16:19:47.48:322,47,0	1/1:7,11:18:4.46:150,4,0	0/0:16,0:14:33.03:0,33,302	0/1:11,1:12:8.19:8,0,153	0/0:27,3:31:12.98:0,13,515	0/0:16,1:17:15.42:0,15,273	1/1:6,2:17:6.90:74,7,0	1/1:2,14:16:41.26:277,41,0	1/1:4,1:6:9.07:38,9,0
chr10	83199126	.	ATGTGCCG	A	2742.51	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.495;DP=634;FS=37.214;HRun=0;HaplotypeScore=146.3142;InbreedingCoeff=0.9874;MQ=80.10;MQ0=0;MQRankSum=-10.299;QD=42.85;ReadPosRankSum=0.726;VQSLOD=1.6355;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:26:51.13:1225,51,0	0/0:6,0:6:12.04:0,12,464	0/0:14,0:14:30.10:0,30,1063	0/0:20,0:20:39.13:0,39,1348	0/0:18,0:18:48.16:0,48,1802	0/0:21,0:21:57.20:0,57,2228	1/1:1,19:20:42.14:1057,42,0	0/0:27,0:27:66.23:0,66,2583	0/0:32,0:32:93.32:0,93,3610	0/0:17,0:17:48.16:0,48,1881	0/0:13,0:13:36.12:0,36,1267	0/0:28,0:28:75.26:0,75,2880	0/0:16,0:16:42.14:0,42,1566	0/0:28,0:28:75.26:0,75,2931	0/0:24,0:24:66.23:0,66,2557	0/0:26,0:26:75.26:0,75,2872	0/0:37,0:37:99:0,108,4187	1/1:9,9:18:24.04:603,24,0	0/0:20,0:20:54.18:0,54,2025	0/0:15,0:15:42.14:0,42,1532	0/0:53,0:53:99:0,154,5908	0/0:10,0:10:27.08:0,27,917	0/0:22,0:22:57.11:0,57,2005	0/0:41,0:40:99:0,111,4299	0/0:11,0:11:30.10:0,30,1103	0/0:29,0:29:87.30:0,87,3239	0/0:32,0:32:96.33:0,96,3526	0/0:10,0:10:30.10:0,30,1175
chr10	83199238	.	G	GTGGAGAGCCA	5776.11	PASS	AB=0.511;AC=7;AF=0.125;AN=56;BaseQRankSum=-4.238;DP=632;FS=13.182;HRun=0;HaplotypeScore=183.8185;InbreedingCoeff=0.8253;MQ=80.05;MQ0=0;MQRankSum=-9.378;QD=80.22;ReadPosRankSum=-0.677;VQSLOD=3.6800;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:18:15.05:800,15,0	0/0:6,0:6:18.05:0,18,486	0/0:16,0:16:45.15:0,45,1328	0/0:17,0:17:50.97:0,51,1316	0/0:22,0:22:60.01:0,60,1559	0/0:22,0:22:66.20:0,66,2065	1/1:0,10:21:30.10:1600,30,0	0/0:29,0:29:87.19:0,87,2506	0/0:24,0:24:72.25:0,72,2409	0/0:25,0:25:71.58:0,72,1933	0/0:8,0:8:24.08:0,24,772	0/0:30,0:30:90.26:0,90,2663	0/0:25,0:25:72.17:0,72,2121	0/0:22,0:22:66.19:0,66,2067	0/0:24,0:24:72.22:0,72,2105	0/0:30,0:30:90.16:0,90,2586	0/0:31,0:31:90.12:0,90,2615	0/0:40,0:40:99:0,111,3401	0/0:19,0:19:57.17:0,57,1531	0/0:17,0:17:42.14:0,42,1193	0/0:47,0:47:99:0,135,4279	0/0:16,0:16:48.15:0,48,1401	0/0:16,0:15:39.12:0,39,1145	0/0:25,0:25:72.23:0,72,2424	0/0:20,0:20:54.19:0,54,1713	0/1:1,11:24:44.64:2408,0,45	0/0:29,0:29:87.28:0,87,2955	1/1:0,6:8:18.06:968,18,0
chr10	83199476	.	GA	G	1852.31	PASS	AB=0.881;AC=12;AF=0.214;AN=56;BaseQRankSum=11.007;DP=540;FS=2.509;HRun=11;HaplotypeScore=61.0463;InbreedingCoeff=0.7922;MQ=79.45;MQ0=0;MQRankSum=-1.678;QD=12.35;ReadPosRankSum=2.787;VQSLOD=3.6247;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,32:36:67.95:643,68,0	0/0:5,0:5:14.91:0,15,143	0/0:32,0:26:24.44:0,24,243	0/0:16,0:13:11.30:0,11,138	0/0:18,0:18:42.11:0,42,447	0/0:18,0:19:53.95:0,54,548	1/1:4,25:29:50.92:418,51,0	0/0:22,1:24:34.54:0,35,532	0/0:17,0:17:33.07:0,33,340	0/0:21,0:21:48.08:0,48,490	0/0:10,0:10:21.03:0,21,210	0/0:22,0:22:51.09:0,51,524	0/0:16,0:16:38.96:0,39,397	0/0:18,0:18:45.02:0,45,450	0/0:19,0:19:51.06:0,51,511	0/0:13,1:14:14.41:0,14,340	0/0:25,2:27:54.43:0,54,634	1/1:4,17:21:44.94:369,45,0	0/1:10,2:12:22.24:22,0,182	0/0:17,0:18:44.15:0,44,459	0/0:26,0:28:59.93:0,60,597	0/0:15,0:15:39.06:0,39,395	0/0:16,0:16:33.02:0,33,330	0/0:19,0:19:48.07:0,48,492	0/0:14,1:15:11.42:0,11,306	1/1:3,15:20:19.96:328,20,0	0/1:16,2:18:4.33:4,0,353	1/1:1,12:13:29.96:246,30,0
chr10	83199664	.	CG	C	2597.30	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=10.047;DP=491;FS=2.639;HRun=5;HaplotypeScore=47.3712;InbreedingCoeff=0.8963;MQ=73.29;MQ0=0;MQRankSum=-0.434;QD=22.98;ReadPosRankSum=2.597;VQSLOD=2.6451;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:48.14:544,48,0	0/0:10,0:10:30.10:0,30,409	0/0:5,0:5:9.03:0,9,123	0/1:13,0:13:0.11:0,0,281	0/0:17,0:17:48.12:0,48,607	0/0:16,0:16:39.11:0,39,503	1/1:2,22:24:57.16:647,57,0	0/0:21,0:21:60.18:0,60,791	0/0:9,0:9:24.08:0,24,328	0/0:15,0:15:42.14:0,42,573	0/0:10,0:10:27.08:0,27,349	0/0:29,0:29:87.27:0,87,1172	0/0:15,0:15:42.14:0,42,573	0/0:22,0:22:60.19:0,60,804	0/0:20,0:20:60.19:0,60,804	0/0:10,0:10:30.10:0,30,409	0/0:31,0:31:84.28:0,84,1148	1/1:2,35:37:96.27:1089,96,0	0/0:16,0:16:42.14:0,42,573	0/0:9,0:9:27.08:0,27,349	0/0:38,0:38:93.26:0,93,1222	0/0:12,0:12:36.12:0,36,491	0/0:14,0:14:42.13:0,42,551	0/0:24,0:24:69.23:0,69,942	0/0:15,0:15:42.13:0,42,557	1/1:2,9:11:5.18:281,5,0	0/0:20,0:20:54.18:0,54,736	1/1:0,6:6:18.05:204,18,0
chr10	83200452	.	GAC	G	415.08	PASS	AB=0.905;AC=24;AF=0.462;AN=52;BaseQRankSum=6.663;DP=577;FS=0.000;HRun=0;HaplotypeScore=82.3776;InbreedingCoeff=0.1986;MQ=66.63;MQ0=3;MQRankSum=-0.441;QD=1.27;ReadPosRankSum=2.146;VQSLOD=1.4911;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:34:2.71:14,3,0	0/0:5,0:5:3.01:0,3,41	./.	./.	0/0:21,0:20:9.01:0,9,109	0/0:16,0:16:12.03:0,12,153	1/1:19,0:23:2.84:14,3,0	0/1:13,0:13:0:0,0,0	0/0:15,0:15:12.04:0,12,176	0/0:21,0:21:11.96:0,12,128	0/1:15,1:16:17.35:17,0,140	0/1:18,4:23:81.26:81,0,195	0/0:14,0:14:16.26:0,16,184	0/1:14,2:16:46.78:47,0,160	0/1:15,2:17:46.81:47,0,160	0/0:17,0:19:24.05:0,24,299	0/0:21,1:22:0.69:0,1,405	1/1:13,0:19:7.65:40,8,0	1/1:22,0:25:0.43:1,0,0	1/1:15,0:18:11.53:74,12,0	0/1:23,5:28:46.81:47,0,115	0/0:15,0:15:21.07:0,21,311	0/1:15,0:15:23.76:24,0,77	0/0:43,0:42:33.07:0,33,443	0/1:17,4:22:18.47:27,0,18	1/1:20,3:23:5.78:54,6,0	1/1:19,0:22:11.36:56,11,0	1/1:11,1:12:3:32,3,0
chr10	83201384	.	GC	G	1292.56	PASS	AB=0.862;AC=18;AF=0.333;AN=54;BaseQRankSum=4.198;DP=336;FS=5.878;HRun=11;HaplotypeScore=41.0754;InbreedingCoeff=-0.0470;MQ=80.82;MQ0=0;MQRankSum=0.765;QD=5.50;ReadPosRankSum=1.656;VQSLOD=0.6057;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,16:26:43:332,43,0	./.	0/1:11,1:12:18.14:18,0,77	0/0:13,0:13:4.31:0,4,25	0/1:4,3:7:34.25:34,0,81	0/1:10,1:11:6.68:7,0,141	1/1:8,22:32:57.97:455,58,0	0/0:15,0:15:21.01:0,21,211	0/0:8,1:9:2.40:0,2,218	0/1:8,1:9:12.62:13,0,84	0/1:7,2:10:13.39:13,0,111	0/1:14,2:16:16.21:16,0,255	0/0:9,0:9:15.04:0,15,160	0/1:9,1:10:3.55:4,0,164	0/0:9,0:9:21.04:0,21,217	0/0:10,0:10:2.55:0,3,228	0/1:20,2:22:1.17:1,0,400	1/1:2,22:24:30.94:461,31,0	0/1:8,3:11:47.41:47,0,78	0/0:4,1:5:9.02:0,9,96	0/1:26,2:28:13.15:13,0,455	0/0:4,0:4:9.02:0,9,95	0/0:2,0:2:2.99:0,3,24	0/0:12,0:13:36.07:0,36,370	0/1:7,2:9:28.23:28,0,138	0/0:7,0:7:6:0,6,57	0/1:7,1:7:9.55:10,0,99	0/0:4,0:4:4.72:0,5,36
chr10	83206270	.	TACAC	T	1400.70	PASS	AB=1.000;AC=12;AF=0.240;AN=50;BaseQRankSum=-2.107;DP=661;FS=9.456;HRun=0;HaplotypeScore=128.2733;InbreedingCoeff=0.6640;MQ=53.03;MQ0=14;MQRankSum=1.926;QD=7.91;ReadPosRankSum=0.959;VQSLOD=2.2727;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:20.84:306,21,0	0/0:6,0:6:4.74:0,5,22	./.	./.	0/0:12,0:12:12.04:0,12,192	0/0:18,0:17:24.79:0,25,423	1/1:24,0:23:20.57:263,21,0	1/1:19,10:29:12.22:253,12,0	0/0:18,0:17:30.04:0,30,404	0/0:25,0:23:45.05:0,45,716	0/0:21,0:20:17.18:0,17,260	0/0:24,0:24:24.06:0,24,345	0/0:19,0:19:21.07:0,21,303	0/0:12,0:12:19.26:0,19,232	0/0:27,0:27:53.75:0,54,773	0/0:31,0:31:32.79:0,33,433	0/0:37,0:36:49.58:0,50,641	1/1:11,0:10:0.34:69,0,0	1/1:15,0:14:11.70:262,12,0	./.	0/1:37,0:34:15.28:15,0,351	0/0:24,0:24:33.58:0,34,538	0/0:14,0:14:27.05:0,27,350	0/0:44,0:44:52.90:0,53,755	0/0:21,0:20:26.98:0,27,384	0/0:40,0:38:62.98:0,63,878	0/1:24,0:24:10.41:393,0,10	0/0:6,0:6:6.02:0,6,112
chr10	83206355	.	C	CACAG	4377.86	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-9.808;DP=732;FS=3.856;HRun=0;HaplotypeScore=132.5885;InbreedingCoeff=0.9627;MQ=60.38;MQ0=12;MQRankSum=-3.767;QD=35.59;ReadPosRankSum=2.022;VQSLOD=4.7744;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,31:36:22.02:978,22,0	0/0:10,0:10:24.08:0,24,413	0/0:57,0:26:47.35:0,47,709	0/0:79,0:33:33.61:0,34,678	0/0:12,0:12:27.06:0,27,414	0/0:17,0:17:48.16:0,48,846	1/1:5,21:31:27.09:692,27,0	0/0:36,0:36:75.23:0,75,1219	0/0:23,0:23:63.22:0,63,1083	0/0:16,0:16:48.16:0,48,838	0/0:24,0:24:60.18:0,60,923	0/0:16,0:15:42.14:0,42,721	0/0:12,0:12:36.08:0,36,593	0/0:13,0:13:36.11:0,36,578	0/0:32,0:32:72.25:0,72,1251	0/0:24,0:24:60.19:0,60,1001	0/0:38,0:36:90.24:0,90,1468	1/1:2,12:14:36.12:888,36,0	0/0:22,0:21:59.85:0,60,906	0/0:26,0:26:75.21:0,75,1096	0/0:53,0:51:99:0,123,2061	0/0:11,0:11:27.08:0,27,442	0/0:21,0:21:51.12:0,51,851	0/0:37,0:36:78.63:0,79,1256	0/0:16,0:16:45.15:0,45,731	1/1:5,21:25:4.14:1204,4,0	0/0:14,0:14:39.13:0,39,683	1/1:0,10:11:24.08:615,24,0
chr10	83206788	.	AG	A	1414.99	PASS	AB=0.981;AC=46;AF=0.885;AN=52;BaseQRankSum=-1.285;DP=334;FS=34.715;HRun=7;HaplotypeScore=66.1607;InbreedingCoeff=0.0833;MQ=66.63;MQ0=11;MQRankSum=-0.828;QD=4.55;ReadPosRankSum=0.602;VQSLOD=-0.7523;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,1:9:2.96:19,3,0	1/1:3,0:3:2.99:24,3,0	0/1:19,1:16:5.16:5,0,181	0/1:26,2:22:18.20:18,0,265	0/1:5,0:5:0.01:0,0,0	1/1:3,2:5:2.94:30,3,0	./.	0/1:10,0:18:13.23:13,0,37	./.	1/1:1,17:17:20.29:181,20,0	1/1:1,6:6:11.97:110,12,0	1/1:2,8:11:8.94:70,9,0	1/1:8,0:8:5.99:54,6,0	1/1:3,5:7:3:30,3,0	1/1:4,11:15:6.01:61,6,0	1/1:3,10:12:9.02:91,9,0	1/1:6,13:17:9.02:91,9,0	1/1:6,2:7:5.99:27,6,0	0/1:7,0:12:2.15:2,0,40	0/1:13,0:12:0.83:1,0,31	1/1:3,8:10:9.02:91,9,0	1/1:2,4:6:6.01:61,6,0	1/1:1,9:10:6.01:61,6,0	1/1:9,4:12:10.98:120,11,0	1/1:3,8:10:3:30,3,0	1/1:2,0:15:28.04:204,28,0	1/1:10,0:9:2.94:18,3,0	1/1:12,0:12:17.06:119,17,0
chr10	83206792	.	G	GA	1014.58	PASS	AB=1.000;AC=12;AF=0.231;AN=52;BaseQRankSum=-1.392;DP=291;FS=7.926;HRun=0;HaplotypeScore=60.7531;InbreedingCoeff=0.4698;MQ=65.45;MQ0=10;MQRankSum=-4.543;QD=13.71;ReadPosRankSum=6.914;VQSLOD=4.0290;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,1:6:2.92:17,3,0	0/0:3,0:3:3.41:0,3,36	0/0:16,0:13:29.13:0,29,383	0/0:25,0:19:44.15:0,44,479	0/0:5,0:5:5.51:0,6,39	0/0:3,0:3:2.84:0,3,14	./.	0/1:14,0:13:49.74:63,0,50	./.	0/0:18,0:17:27.25:0,27,206	0/0:6,0:5:10.85:0,11,51	0/0:11,0:11:9.65:0,10,51	0/0:6,0:6:1.65:0,2,35	0/0:7,0:6:5.87:0,6,40	0/0:13,0:13:11.75:0,12,83	0/0:11,0:10:8.59:0,9,44	0/0:15,0:13:7.72:0,8,34	1/1:3,4:6:15.02:187,15,0	0/1:10,0:10:28.42:70,0,28	0/0:10,0:9:8.15:0,8,101	0/0:12,0:11:6.75:0,7,32	0/0:5,0:5:8.54:0,9,55	0/0:9,0:9:5.64:0,6,27	0/0:12,0:11:20.21:0,20,111	0/0:11,0:10:11.87:0,12,92	1/1:13,0:13:38.86:383,39,0	1/1:10,0:9:2.50:9,2,0	1/1:0,12:12:33.10:438,33,0
chr10	83206794	.	G	GA	2393.97	PASS	AB=0.875;AC=48;AF=0.923;AN=52;BaseQRankSum=-1.429;DP=268;FS=4.908;HRun=0;HaplotypeScore=49.9199;InbreedingCoeff=0.1145;MQ=66.60;MQ0=10;MQRankSum=-3.003;QD=9.58;ReadPosRankSum=3.046;VQSLOD=2.7192;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:6:2.96:19,3,0	1/1:0,3:3:3.01:44,3,0	0/1:14,0:11:5.16:5,0,181	0/1:22,0:18:18.94:19,0,263	0/1:0,5:5:0:0,0,0	1/1:2,0:2:3.01:30,3,0	./.	1/1:12,0:11:19.91:98,20,0	./.	1/1:17,1:17:21.48:221,21,0	1/1:6,0:5:12.03:136,12,0	1/1:9,0:9:9.02:119,9,0	1/1:0,6:6:6.01:74,6,0	1/1:6,0:5:3.01:30,3,0	1/1:12,0:12:6.01:61,6,0	1/1:10,1:10:9.02:91,9,0	1/1:13,1:12:9.02:91,9,0	1/1:7,0:6:15.02:189,15,0	1/1:8,0:8:19.36:122,19,0	0/1:8,0:7:0.83:1,0,31	1/1:11,0:10:9.02:92,9,0	1/1:4,0:4:6.01:61,6,0	1/1:9,0:9:6.01:61,6,0	1/1:6,6:11:11.15:120,11,0	1/1:8,0:7:3.01:30,3,0	1/1:13,0:13:32.88:326,33,0	1/1:10,0:9:2.94:18,3,0	1/1:12,0:12:33.10:442,33,0
chr10	83208745	.	AGGT	A	1227.78	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.432;DP=418;FS=15.659;HRun=0;HaplotypeScore=75.4577;InbreedingCoeff=0.8111;MQ=89.16;MQ0=1;MQRankSum=-2.020;QD=31.48;ReadPosRankSum=2.466;VQSLOD=3.0380;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:45.15:749,45,0	0/0:4,0:4:12.04:0,12,277	0/0:30,0:30:81.27:0,81,1700	0/0:23,0:20:47.29:0,47,1018	0/0:9,0:9:24.08:0,24,508	0/0:21,0:21:51.18:0,51,1174	1/1:0,16:16:36.12:599,36,0	0/0:26,0:26:72.24:0,72,1640	0/0:15,0:15:42.13:0,42,892	0/0:7,0:7:21.07:0,21,469	0/0:4,0:4:12.04:0,12,276	0/0:21,0:21:63.22:0,63,1417	0/0:12,0:12:33.11:0,33,747	0/0:16,0:16:48.16:0,48,1075	0/0:13,0:13:33.11:0,33,761	0/0:15,0:15:45.15:0,45,1036	0/0:16,0:16:45.15:0,45,1035	0/0:18,0:18:54.19:0,54,1244	0/0:23,0:23:69.24:0,69,1564	0/0:10,0:10:30.10:0,30,691	0/0:21,0:21:63.20:0,63,1406	0/0:10,0:10:27.09:0,27,622	0/0:1,0:1:3.01:0,3,69	0/0:26,0:26:66.23:0,66,1492	0/0:5,0:5:15.05:0,15,342	0/0:9,0:9:24.08:0,24,553	0/0:23,0:22:66.23:0,66,1509	0/0:1,0:1:3.01:0,3,69
chr10	83209527	.	GCA	G	825.69	PASS	AB=0.919;AC=19;AF=0.352;AN=54;BaseQRankSum=6.780;DP=702;FS=8.602;HRun=0;HaplotypeScore=107.5817;InbreedingCoeff=-0.0630;MQ=56.69;MQ0=6;MQRankSum=1.937;QD=1.82;ReadPosRankSum=1.492;VQSLOD=1.4379;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,2:38:26.01:26,0,649	0/0:7,0:7:12.04:0,12,186	./.	0/0:22,0:6:8.24:0,8,89	0/0:21,0:21:7.90:0,8,523	0/1:10,3:12:85.27:85,0,98	0/1:39,1:39:0.64:1,0,752	0/0:25,0:24:30.03:0,30,369	0/1:18,2:20:7.41:7,0,316	0/0:28,0:27:48.04:0,48,625	0/1:16,1:17:4.36:4,0,340	0/0:31,1:32:11.07:0,11,716	0/1:20,1:21:20.21:20,0,418	0/0:23,0:24:48.15:0,48,708	0/0:18,3:22:7.63:0,8,528	0/0:23,0:22:17.32:0,17,543	0/1:29,4:31:49.29:49,0,620	1/1:9,14:24:35.84:367,36,0	0/0:8,0:8:3:0,3,27	0/1:18,1:19:16.43:16,0,210	0/1:59,4:60:73.14:73,0,1019	0/0:20,0:20:14.32:0,14,424	0/1:14,2:16:35.85:36,0,354	0/1:44,3:47:8.32:8,0,795	0/1:30,3:32:74.18:74,0,694	1/1:16,0:31:24.88:139,25,0	0/1:23,2:24:41.36:41,0,570	1/1:4,0:7:8.52:42,9,0
chr10	83209598	.	TCA	T	360.55	PASS	AB=0.915;AC=17;AF=0.315;AN=54;BaseQRankSum=6.026;DP=623;FS=10.977;HRun=0;HaplotypeScore=92.7275;InbreedingCoeff=0.1433;MQ=44.99;MQ0=85;MQRankSum=-1.998;QD=1.28;ReadPosRankSum=1.675;VQSLOD=0.7714;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:16:2.84:14,3,0	0/0:6,0:6:9:0,9,137	0/0:30,0:2:1.55:0,2,36	./.	0/0:18,0:15:10.80:0,11,310	0/0:15,0:13:30.09:0,30,426	0/0:16,0:9:6.99:0,7,59	0/0:23,0:12:12.02:0,12,155	0/0:12,0:12:24.05:0,24,338	0/1:22,3:22:49.72:50,0,570	0/1:12,2:12:43.71:44,0,247	0/0:26,0:24:42.14:0,42,636	0/0:19,1:19:8.20:0,8,537	0/0:19,0:17:36.12:0,36,548	0/1:21,1:21:4.98:5,0,500	0/1:23,1:19:0.76:1,0,423	0/1:28,4:27:93.75:94,0,379	1/1:12,0:16:14.20:70,14,0	0/1:18,1:14:15.85:16,0,207	0/0:13,0:12:33.11:0,33,496	0/0:65,0:56:72.10:0,72,1148	0/0:24,0:18:33.11:0,33,501	0/1:12,2:12:43.71:44,0,251	0/1:39,2:37:13.99:14,0,664	0/0:14,0:10:12:0,12,158	1/1:19,0:18:19.55:97,20,0	0/1:13,2:13:46.77:47,0,184	1/1:5,0:5:5.68:28,6,0
chr10	83209673	.	TCACACACA	T	710.07	PASS	AB=0.781;AC=3;AF=0.054;AN=56;BaseQRankSum=5.372;DP=675;FS=1.016;HRun=0;HaplotypeScore=141.9303;InbreedingCoeff=-0.0707;MQ=43.74;MQ0=89;MQRankSum=-5.146;QD=11.09;ReadPosRankSum=-1.252;VQSLOD=2.5791;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,2:20:91.01:104,0,91	0/0:8,0:6:5.82:0,6,184	0/0:41,0:2:6.02:0,6,190	0/0:31,0:2:6.02:0,6,160	0/0:14,0:11:15.05:0,15,544	0/0:17,0:16:27.09:0,27,930	0/1:13,12:19:94.01:477,0,94	0/0:32,0:13:30.10:0,30,1071	0/0:14,0:13:24.08:0,24,990	0/0:37,0:33:63.22:0,63,1991	0/0:19,0:17:18.06:0,18,642	0/0:24,0:20:36.12:0,36,1328	0/0:22,0:20:24.08:0,24,929	0/0:20,0:18:36.12:0,36,1487	0/0:25,0:23:26.68:0,27,1105	0/0:22,0:22:51.18:0,51,1959	0/0:27,0:23:54.19:0,54,2015	0/1:7,1:11:27.73:229,0,28	0/0:13,0:8:15.05:0,15,454	0/0:24,0:19:39.12:0,39,1391	0/0:48,0:43:50.90:0,51,1965	0/0:27,0:24:51.18:0,51,1908	0/0:22,0:19:27.09:0,27,965	0/0:39,0:34:44.42:0,44,2271	0/0:11,0:9:18.06:0,18,666	0/0:35,0:26:48.16:0,48,1369	0/0:23,0:19:36.12:0,36,1481	0/0:10,0:8:15.05:0,15,554
chr10	83209750	.	TCA	T	211.20	PASS	AB=0.932;AC=11;AF=0.212;AN=52;BaseQRankSum=5.139;DP=644;FS=4.295;HRun=0;HaplotypeScore=108.6370;InbreedingCoeff=-0.0354;MQ=49.85;MQ0=25;MQRankSum=0.620;QD=0.89;ReadPosRankSum=0.522;VQSLOD=1.7913;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:33:55.81:0,56,712	0/0:6,0:6:9.03:0,9,135	./.	./.	0/0:20,0:21:19.73:0,20,301	0/1:16,1:16:0.98:1,0,377	0/1:28,2:30:36.34:36,0,376	0/0:24,0:16:20.08:0,20,239	0/1:20,1:21:32.80:33,0,565	0/1:24,1:23:1.44:1,0,558	0/0:14,0:13:21.05:0,21,300	0/1:19,2:21:31.73:32,0,368	0/0:14,2:15:1.71:0,2,437	0/0:28,1:28:12.67:0,13,631	0/1:29,1:28:12.75:13,0,565	0/1:22,7:29:99:101,0,293	0/1:26,2:28:40.96:41,0,693	1/1:10,0:16:16.09:82,16,0	0/1:16,0:13:8.73:9,0,222	0/0:19,1:20:13.97:0,14,650	0/0:44,1:41:25.20:0,25,716	0/0:17,0:17:35.54:0,36,412	0/0:9,0:10:21.06:0,21,286	0/0:43,1:44:30.24:0,30,1039	0/0:14,0:12:8.52:0,9,206	0/0:24,0:23:28.88:0,29,268	0/0:14,0:14:33.11:0,33,485	0/0:8,0:7:8.74:0,9,73
chr10	83211259	.	TGAGAGA	T	858.61	PASS	AB=0.944;AC=11;AF=0.262;AN=42;BaseQRankSum=2.937;DP=441;FS=21.295;HRun=0;HaplotypeScore=97.8533;InbreedingCoeff=0.4271;MQ=43.41;MQ0=32;MQRankSum=4.554;QD=6.55;ReadPosRankSum=0.819;VQSLOD=0.4274;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,1:22:14.57:221,15,0	0/1:9,0:9:1.44:1,0,20	./.	./.	./.	0/0:10,0:8:3.01:0,3,41	0/1:19,0:15:12.71:59,0,13	0/0:23,0:19:7.44:0,7,40	0/0:15,0:15:3.90:0,4,77	1/1:14,7:19:21.07:362,21,0	./.	0/0:19,0:19:14.55:0,15,276	0/0:23,0:22:18.37:0,18,368	0/0:13,0:13:0.47:0,0,1	0/0:20,0:20:5.97:0,6,44	0/0:22,0:22:15.05:0,15,381	0/0:28,0:26:32.09:0,32,543	0/0:18,0:15:2.84:0,3,14	0/0:13,0:12:3.90:0,4,39	0/0:14,0:13:0.47:0,0,1	1/1:17,0:15:14.35:127,14,0	1/1:14,0:14:3:28,3,0	./.	0/0:39,0:35:14.84:0,15,242	./.	0/1:20,0:23:17.72:195,0,18	0/0:19,0:16:12.96:0,13,189	./.
chr10	83212036	.	T	TAA	1171.83	PASS	AB=0.647;AC=5;AF=0.089;AN=56;BaseQRankSum=0.279;DP=553;FS=8.868;HRun=11;HaplotypeScore=70.1504;InbreedingCoeff=0.7309;MQ=63.73;MQ0=6;MQRankSum=-1.459;QD=16.50;ReadPosRankSum=-0.928;VQSLOD=1.6868;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:39:83.99:0,84,864	0/0:13,0:13:30:0,30,291	0/0:8,0:4:11.64:0,12,78	0/0:7,0:4:5.82:0,6,43	0/0:35,0:36:91:0,91,875	0/0:20,0:20:54.04:0,54,516	0/0:17,0:17:39.02:0,39,378	0/0:16,0:20:34.24:0,34,349	0/0:21,0:22:48.01:0,48,515	0/0:18,0:19:29.85:0,30,337	0/0:16,0:17:47.48:0,47,443	0/0:16,0:16:30.01:0,30,291	0/0:14,0:15:38.83:0,39,378	0/0:14,0:14:36:0,36,334	0/0:17,0:17:45.06:0,45,431	0/0:17,0:18:50.36:0,50,476	0/0:27,0:29:68.79:0,69,646	1/1:6,27:33:77.75:1095,78,0	0/0:23,0:20:36.45:0,36,350	0/0:26,0:26:62.72:0,63,604	0/0:11,0:11:23.96:0,24,220	0/0:13,0:13:32.38:0,32,287	0/0:23,0:25:62.53:0,63,576	0/0:8,0:8:18.01:0,18,175	0/0:26,0:26:53.01:0,53,522	1/1:7,2:25:16.14:183,16,0	0/0:22,0:22:45:0,45,436	0/1:5,0:11:16.11:21,0,16
chr10	83212886	.	AAAAT	A	599.25	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=3.734;DP=315;FS=0.000;HRun=0;HaplotypeScore=70.2962;InbreedingCoeff=0.8246;MQ=68.40;MQ0=0;MQRankSum=-2.917;QD=24.97;ReadPosRankSum=0.593;VQSLOD=3.1671;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,9:15:33.11:556,33,0	0/0:4,0:4:9.03:0,9,212	0/0:27,0:18:34.19:0,34,681	0/0:8,0:6:12.44:0,12,205	0/0:7,0:7:17.99:0,18,423	0/0:9,0:9:19.62:0,20,416	1/1:3,6:9:9.03:156,9,0	0/0:16,0:16:33.11:0,33,773	0/0:14,0:14:36.12:0,36,816	0/0:16,0:16:42.14:0,42,1013	0/0:5,0:5:15.05:0,15,314	0/0:5,0:5:12.04:0,12,304	0/0:9,0:9:27.09:0,27,672	0/0:3,0:3:9.03:0,9,217	0/0:9,0:9:24.08:0,24,559	0/0:11,0:11:24.08:0,24,586	0/0:25,0:25:63.22:0,63,1579	0/0:10,0:10:21.07:0,21,532	0/0:15,0:15:36.12:0,36,882	0/0:14,0:14:42.14:0,42,976	0/0:7,0:7:15.05:0,15,381	0/0:5,0:5:12.04:0,12,295	0/0:11,0:11:33.10:0,33,735	0/0:3,0:3:9.03:0,9,228	0/0:14,0:14:33.11:0,33,799	0/0:19,0:19:51.17:0,51,1248	0/0:23,0:22:66.23:0,66,1578	./.
chr10	83215371	.	T	TGCG	2886.74	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.473;DP=641;FS=1.189;HRun=0;HaplotypeScore=95.1813;InbreedingCoeff=0.9699;MQ=89.75;MQ0=0;MQRankSum=-4.743;QD=43.09;ReadPosRankSum=1.734;VQSLOD=5.2668;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,34:41:78.27:1700,78,0	0/0:7,0:7:9.03:0,9,143	0/0:24,0:24:59.55:0,60,839	0/0:25,0:25:48.11:0,48,661	0/0:17,0:17:45.14:0,45,691	0/0:25,0:25:69.22:0,69,1071	1/1:4,21:26:60.21:1309,60,0	0/0:31,0:31:90.29:0,90,1385	0/0:20,0:20:57.18:0,57,881	0/0:23,0:23:57.19:0,57,898	0/0:19,0:19:54.18:0,54,856	0/0:16,0:16:30.09:0,30,453	0/0:16,0:16:48.16:0,48,761	0/0:22,0:22:60.19:0,60,929	0/0:30,0:30:84.29:0,84,1332	0/0:23,0:23:63.21:0,63,995	0/0:43,0:43:99:0,129,1981	0/0:29,0:29:87.25:0,87,1348	0/0:22,0:22:54.18:0,54,832	0/0:17,0:17:42.13:0,42,643	0/0:38,0:38:93.30:0,93,1450	0/0:14,0:14:39.12:0,39,595	0/0:12,0:12:33.11:0,33,523	0/0:28,0:28:84.27:0,84,1306	0/0:10,0:10:27.09:0,27,428	0/0:26,0:26:72.23:0,72,1109	0/0:23,0:23:60.17:0,60,904	0/0:14,0:14:39.13:0,39,618
chr10	83215642	.	G	GTT	1044.08	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=9.912;DP=502;FS=0.000;HRun=8;HaplotypeScore=64.0151;InbreedingCoeff=0.8284;MQ=67.19;MQ0=2;MQRankSum=-0.776;QD=12.43;ReadPosRankSum=0.862;VQSLOD=0.0483;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:84.18:0,84,924	0/0:5,0:5:15.02:0,15,155	0/0:10,0:5:8.63:0,9,85	0/1:7,0:7:6.63:7,0,43	0/0:24,0:24:63.17:0,63,702	0/0:21,0:21:51.11:0,51,558	0/0:14,0:14:39.08:0,39,425	0/0:26,0:26:66.15:0,66,727	0/0:16,0:16:39.08:0,39,426	0/0:22,0:22:60.16:0,60,666	0/0:14,0:14:39.10:0,39,434	0/0:14,0:14:30.05:0,30,334	0/0:27,0:27:39.80:0,40,705	0/0:9,0:9:21.05:0,21,234	0/0:20,0:20:57.10:0,57,607	0/0:15,0:15:42.11:0,42,468	0/0:18,0:18:48.12:0,48,534	1/1:5,21:26:54.14:829,54,0	0/0:18,0:18:45.06:0,45,476	0/0:17,0:17:45.10:0,45,491	0/0:12,0:12:33.07:0,33,357	0/0:8,0:9:11.94:0,12,182	0/0:15,0:15:42.11:0,42,465	0/0:8,0:8:18.01:0,18,182	0/0:23,0:23:47.42:0,47,613	1/1:3,0:25:55.02:191,55,0	0/0:28,0:28:78.20:0,78,869	1/1:5,0:26:47.41:163,47,0
chr10	83215878	.	G	GA	1391.60	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.159;DP=576;FS=8.429;HRun=9;HaplotypeScore=59.6613;InbreedingCoeff=0.9271;MQ=77.29;MQ0=1;MQRankSum=0.129;QD=24.85;ReadPosRankSum=-2.123;VQSLOD=3.5190;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,31:35:93.21:1015,93,0	0/0:9,0:9:26.98:0,27,230	0/0:22,0:20:38.96:0,39,335	0/0:21,0:20:21.96:0,22,202	0/0:16,0:16:44.97:0,45,386	0/0:22,0:22:62.95:0,63,542	1/1:4,17:21:45.12:498,45,0	0/0:25,0:25:65.96:0,66,568	0/0:21,0:21:53.98:0,54,469	0/0:17,0:17:50.99:0,51,443	0/0:14,0:14:32.98:0,33,286	0/0:11,0:11:32.99:0,33,287	0/0:19,0:19:44.96:0,45,386	0/0:17,0:17:44.97:0,45,387	0/0:24,0:24:62.94:0,63,539	0/0:25,0:25:68.98:0,69,599	0/0:24,0:24:62.98:0,63,547	0/0:27,0:27:49.51:0,50,590	0/0:20,0:20:4.53:0,5,321	0/0:17,1:18:17.81:0,18,383	0/0:35,0:37:94.02:0,94,789	0/0:12,0:12:29.97:0,30,257	0/0:12,0:12:29.97:0,30,257	0/0:25,0:25:71.98:0,72,625	0/0:16,0:16:44.99:0,45,391	0/0:23,0:23:59.97:0,60,518	0/0:30,0:30:77.97:0,78,677	0/0:13,0:13:38.99:0,39,338
chr10	83217516	.	AG	A	563.78	PASS	AB=0.928;AC=6;AF=0.107;AN=56;BaseQRankSum=8.426;DP=512;FS=4.174;HRun=1;HaplotypeScore=76.7907;InbreedingCoeff=0.3511;MQ=60.91;MQ0=20;MQRankSum=-9.007;QD=6.71;ReadPosRankSum=-2.014;VQSLOD=-0.0277;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:99:121,0,223	0/0:3,0:3:8.86:0,9,104	0/0:45,1:22:41.03:0,41,387	0/0:48,0:13:18.50:0,19,263	0/0:25,0:24:54.21:0,54,673	0/0:23,0:23:43.33:0,43,802	0/1:11,0:10:7.72:8,0,222	0/0:23,0:21:17.51:0,18,607	0/0:12,0:12:33.09:0,33,471	0/0:17,0:17:45.14:0,45,634	0/0:15,0:15:39:0,39,515	0/0:13,0:12:23.52:0,24,401	0/0:10,0:10:30:0,30,360	0/0:12,0:12:35.94:0,36,446	0/0:17,0:17:45.08:0,45,586	0/0:13,0:12:32.94:0,33,418	0/0:32,0:31:25.91:0,26,945	1/1:19,1:21:49.70:366,50,0	0/0:18,0:17:51.15:0,51,724	0/0:11,0:11:14:0,14,350	0/0:12,0:12:26.58:0,27,346	0/0:11,0:11:23.38:0,23,335	0/0:17,1:18:51.13:0,51,700	0/0:16,0:15:36.02:0,36,479	0/0:14,0:14:30.04:0,30,427	0/1:19,2:20:3.29:148,0,3	0/0:18,0:18:33.59:0,34,582	0/1:3,1:4:12.96:48,0,13
chr10	83218586	.	CGTGGAGTGGGGGTGGGGGTGGGGGTGGGG	C	739.34	PASS	AB=0.913;AC=7;AF=0.152;AN=46;BaseQRankSum=1.822;DP=143;FS=31.850;HRun=0;HaplotypeScore=105.0121;InbreedingCoeff=-0.2370;MQ=82.48;MQ0=0;MQRankSum=-3.723;QD=15.40;ReadPosRankSum=0.718;VQSLOD=0.3018;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:6.91:0,7,158	./.	0/0:6,0:6:8.90:0,9,307	0/1:11,0:10:99:106,0,675	0/0:5,0:5:9.03:0,9,575	0/0:5,0:5:9.03:0,9,438	0/0:12,0:12:24.08:0,24,1095	0/0:7,0:7:15.05:0,15,553	0/0:3,0:3:9.03:0,9,978	0/1:7,1:8:99:214,0,444	./.	0/1:4,0:4:57.86:58,0,527	0/0:4,0:4:12.03:0,12,1216	0/0:2,0:2:6.02:0,6,515	0/0:3,0:3:9.03:0,9,534	0/1:2,2:4:99:220,0,108	0/0:9,0:9:18.03:0,18,589	0/1:12,0:12:21.06:21,0,481	0/1:4,0:4:30.62:31,0,189	./.	0/0:6,0:6:9.03:0,9,479	0/0:4,0:4:9.03:0,9,392	0/0:3,0:3:3.01:0,3,399	0/0:6,0:6:6.02:0,6,410	./.	0/0:7,0:7:15.04:0,15,480	0/1:4,1:5:99:211,0,810	./.
chr10	83219091	.	C	CT	223.40	PASS	AB=0.958;AC=7;AF=0.125;AN=56;BaseQRankSum=8.349;DP=579;FS=4.754;HRun=12;HaplotypeScore=88.2616;InbreedingCoeff=0.5134;MQ=73.40;MQ0=5;MQRankSum=0.271;QD=2.17;ReadPosRankSum=1.715;VQSLOD=-0.3305;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:47,0:47:3.82:81,0,4	0/0:11,0:11:20.79:0,21,148	0/0:45,0:24:15.54:0,16,97	0/0:25,0:10:12.10:0,12,63	0/0:33,0:33:50.58:0,51,480	0/0:22,0:22:53.54:0,54,382	0/1:23,0:23:12.78:43,0,13	0/0:37,0:37:43.93:0,44,412	0/0:10,0:11:19.88:0,20,135	0/0:16,1:17:9.54:0,10,229	0/0:17,0:17:35.73:0,36,258	0/0:15,1:16:6.52:0,7,204	0/0:16,0:16:38.65:0,39,271	0/0:5,0:5:8.91:0,9,66	0/0:20,0:20:26.69:0,27,191	0/0:10,0:11:22.52:0,23,143	0/0:23,2:25:9.80:0,10,383	0/0:27,0:28:62.81:0,63,438	0/0:22,2:23:24.91:0,25,339	0/0:26,1:28:42.37:0,42,471	0/1:6,1:7:17.24:17,0,54	0/0:14,0:16:25.48:0,25,169	0/0:18,2:21:15.13:0,15,263	0/0:6,0:7:16.91:0,17,111	0/0:13,0:13:25.83:0,26,178	1/1:15,0:15:27.94:135,28,0	0/0:26,0:25:21.05:0,21,277	1/1:11,0:11:17.13:88,17,0
chr10	83219092	.	T	TC	1539.83	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.582;DP=580;FS=16.807;HRun=1;HaplotypeScore=83.7649;InbreedingCoeff=0.9622;MQ=73.29;MQ0=6;MQRankSum=0.026;QD=16.04;ReadPosRankSum=2.938;VQSLOD=2.5725;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:48,0:48:54.84:746,55,0	0/0:10,0:10:30.07:0,30,355	0/0:46,0:24:30.37:0,30,368	0/0:27,0:10:8.82:0,9,112	0/0:32,0:32:88.43:0,88,1070	0/0:22,0:22:63.18:0,63,800	1/1:21,1:22:19.89:368,20,0	0/0:37,0:37:94.65:0,95,1073	0/0:11,0:11:29.95:0,30,321	0/0:17,0:17:35.81:0,36,455	0/0:17,0:17:48.10:0,48,575	0/0:16,0:16:43.79:0,44,546	0/0:15,0:15:42.11:0,42,521	0/0:5,0:5:12.03:0,12,153	0/0:20,0:20:45.10:0,45,531	0/0:11,0:11:32.94:0,33,348	0/0:24,0:24:63.53:0,64,833	0/0:28,0:28:80.67:0,81,941	0/0:25,0:24:62.40:0,62,769	0/0:28,0:28:73.90:0,74,955	0/0:7,0:7:16.71:0,17,197	0/0:16,0:16:38.92:0,39,426	0/0:22,0:22:49.79:0,50,635	0/0:7,0:7:20.95:0,21,248	0/0:14,0:14:32.67:0,33,392	1/1:8,6:15:33.85:376,34,0	0/0:27,0:26:72.98:0,73,807	1/1:1,10:11:13.30:207,13,0
chr10	83219102	.	T	TA	153.10	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.980;DP=574;FS=5.523;HRun=0;HaplotypeScore=79.6106;InbreedingCoeff=0.8613;MQ=67.29;MQ0=6;MQRankSum=-0.665;QD=5.89;ReadPosRankSum=-0.162;VQSLOD=2.6379;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:51:99:0,136,1089	0/0:8,0:8:24.07:0,24,315	0/0:37,0:17:24.03:0,24,197	0/0:24,0:8:9.65:0,10,107	0/0:30,0:30:85.08:0,85,1046	0/0:23,0:23:66.17:0,66,847	0/0:21,0:21:60.75:0,61,484	0/0:37,0:37:95.65:0,96,1077	0/0:12,0:12:29.99:0,30,346	0/0:19,0:19:53.92:0,54,650	0/0:17,0:17:44.96:0,45,566	0/0:13,0:13:35.39:0,35,479	0/0:17,0:17:51.13:0,51,624	0/0:8,0:8:24.02:0,24,255	0/0:16,0:16:48.02:0,48,536	0/0:10,0:10:29.29:0,29,306	0/0:28,0:28:71.61:0,72,928	0/0:31,0:31:87.05:0,87,1043	0/0:29,0:28:77.39:0,77,945	0/0:31,0:31:85.91:0,86,1106	0/0:4,0:4:7.72:0,8,122	0/0:13,0:13:33.79:0,34,374	0/0:23,0:23:56.63:0,57,688	0/0:7,0:7:20.97:0,21,244	0/0:15,0:15:42.02:0,42,486	1/1:10,9:19:8.50:195,9,0	0/0:23,0:22:60.60:0,61,707	1/1:6,1:7:8.34:63,8,0
chr10	83219103	.	T	TAA	808.52	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.241;DP=572;FS=4.088;HRun=7;HaplotypeScore=88.3912;InbreedingCoeff=0.8516;MQ=65.87;MQ0=6;MQRankSum=-0.538;QD=31.10;ReadPosRankSum=-0.698;VQSLOD=3.5904;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:50:99:0,106,750	0/0:8,0:8:21.05:0,21,232	0/0:35,0:15:3.93:0,4,130	0/0:23,0:7:5.98:0,6,50	0/0:31,0:31:66.12:0,66,750	0/0:22,0:22:54.14:0,54,617	0/0:18,0:21:52.25:0,52,355	0/0:38,0:38:74.96:0,75,833	0/0:12,0:12:36.06:0,36,386	0/0:21,0:21:48.08:0,48,530	0/0:16,0:16:39.11:0,39,451	0/0:13,0:13:33.07:0,33,372	0/0:17,0:17:33.08:0,33,383	0/0:8,0:8:18.05:0,18,208	0/0:16,0:16:36.10:0,36,417	0/0:10,0:10:24.02:0,24,268	0/0:28,0:28:75.08:0,75,823	0/0:30,0:31:71.87:0,72,784	0/0:29,0:28:74.75:0,75,816	0/0:31,0:31:81.21:0,81,920	0/0:4,0:4:12:0,12,117	0/0:13,0:13:24.05:0,24,268	0/0:23,0:23:54.12:0,54,615	0/0:8,0:8:15.01:0,15,164	0/0:15,0:15:42.09:0,42,464	1/1:12,7:19:45.15:662,45,0	0/0:23,0:22:51.12:0,51,592	1/1:2,4:7:18.53:266,19,0
chr10	83220045	.	GAC	G	432.05	PASS	AB=1.000;AC=14;AF=0.269;AN=52;BaseQRankSum=8.803;DP=445;FS=0.000;HRun=0;HaplotypeScore=75.1106;InbreedingCoeff=0.2068;MQ=46.16;MQ0=35;MQRankSum=-2.863;QD=2.34;ReadPosRankSum=-1.149;VQSLOD=0.8082;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:17:9.04:9,0,18	0/0:6,0:6:11.51:0,12,118	./.	./.	0/0:14,0:13:6.30:0,6,110	0/0:16,0:14:6.16:0,6,77	0/1:23,0:17:0.81:24,0,1	0/0:17,0:15:19.11:0,19,163	0/0:23,0:23:25.82:0,26,415	0/1:20,0:20:13.25:13,0,267	0/0:13,0:12:17.71:0,18,179	0/1:16,0:15:0.74:1,0,212	0/1:13,0:13:28.41:28,0,150	0/0:18,0:17:38.32:0,38,428	0/0:28,0:27:17.77:0,18,527	0/0:25,0:23:31.14:0,31,436	0/0:14,4:16:29.64:0,30,294	1/1:10,0:8:8.78:89,9,0	0/1:10,0:9:18.27:18,0,79	0/0:15,0:15:5.99:0,6,50	0/1:27,0:22:63.44:63,0,138	0/0:16,0:15:2.86:0,3,25	0/0:11,0:10:2.33:0,2,43	0/0:22,0:21:46.84:0,47,523	0/0:14,0:14:14.99:0,15,147	1/1:17,0:14:30.58:240,31,0	0/1:19,0:17:12.65:35,0,13	1/1:11,0:7:9.86:64,10,0
chr10	83220047	.	CAG	C	388.32	PASS	AB=0.920;AC=13;AF=0.250;AN=52;BaseQRankSum=3.371;DP=476;FS=10.768;HRun=0;HaplotypeScore=80.0801;InbreedingCoeff=0.1528;MQ=46.10;MQ0=35;MQRankSum=-0.896;QD=2.35;ReadPosRankSum=0.437;VQSLOD=0.7524;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:4.25:0,4,34	0/0:5,0:5:5.97:0,6,57	./.	./.	0/0:18,0:17:12.01:0,12,125	0/1:16,3:17:18.48:18,0,101	0/0:24,0:18:1.41:0,1,6	1/1:14,1:13:3:28,3,0	0/0:26,0:26:42.37:0,42,463	0/1:18,2:20:32.72:33,0,308	0/0:13,0:12:6.02:0,6,91	0/0:17,0:16:2.33:0,2,142	0/1:14,0:14:72.68:73,0,154	0/0:19,0:18:26.26:0,26,322	0/0:29,0:28:18.82:0,19,377	0/0:25,0:23:24.29:0,24,344	0/0:18,0:16:15.05:0,15,216	1/1:10,0:8:8.89:68,9,0	0/1:10,0:9:9.45:21,0,9	0/1:8,8:16:0.05:0,0,0	0/1:28,0:24:25.76:210,0,26	0/0:11,0:23:5.83:0,6,45	0/1:13,0:12:6.58:7,0,19	0/0:24,0:22:27.07:0,27,372	0/0:17,0:17:6:0,6,70	0/0:17,0:14:8.62:0,9,56	1/1:6,14:18:6.80:71,7,0	0/0:11,0:7:3.19:0,3,23
chr10	83220081	.	GAC	G	354.10	PASS	AB=0.996;AC=10;AF=0.179;AN=56;BaseQRankSum=8.493;DP=570;FS=15.905;HRun=0;HaplotypeScore=90.3536;InbreedingCoeff=-0.0037;MQ=51.22;MQ0=18;MQRankSum=-1.227;QD=2.17;ReadPosRankSum=-2.739;VQSLOD=0.0785;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:6.46:0,6,121	0/1:9,0:9:6.99:7,0,100	0/0:9,0:8:0.02:0,0,88	0/1:18,0:8:17.95:18,0,37	0/0:32,0:30:59.64:0,60,600	0/1:19,0:18:0.60:1,0,271	0/1:25,0:21:27.43:36,0,27	0/0:23,0:23:15.87:0,16,323	0/0:24,0:24:35.22:0,35,638	0/0:32,0:32:35.02:0,35,742	0/0:14,0:14:29.69:0,30,312	0/1:13,0:13:67.80:68,0,230	0/1:13,0:13:8.91:9,0,316	0/0:18,0:18:28.75:0,29,418	0/0:22,0:21:14.89:0,15,566	0/0:24,0:22:0.84:0,1,594	0/0:20,0:19:41.87:0,42,426	1/1:10,4:11:27.89:285,28,0	0/0:15,0:15:15.45:0,15,235	0/0:30,0:30:36.81:0,37,295	0/1:30,1:28:45.49:45,0,216	0/0:33,0:32:38.75:0,39,351	0/0:15,0:15:6.03:0,6,220	0/0:23,1:22:36.89:0,37,560	0/0:17,0:17:23.98:0,24,235	0/0:21,0:20:42.37:0,42,334	0/1:21,0:20:24.55:25,0,50	0/0:13,0:11:20.94:0,21,191
chr10	83220105	.	C	CGG	991.50	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.936;DP=559;FS=1.252;HRun=6;HaplotypeScore=85.9875;InbreedingCoeff=0.9877;MQ=66.28;MQ0=4;MQRankSum=-4.922;QD=11.27;ReadPosRankSum=0.380;VQSLOD=-0.2930;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:21:19:97,19,0	0/0:6,0:6:18.06:0,18,218	0/0:24,0:22:56.97:0,57,627	0/0:26,0:14:15.16:0,15,159	0/0:28,0:28:63.18:0,63,767	0/0:16,0:16:39.10:0,39,463	1/1:0,0:21:28.87:159,29,0	0/0:39,0:39:63.08:0,63,741	0/0:18,0:18:42.13:0,42,512	0/0:27,0:27:78.20:0,78,934	0/0:20,0:20:42.12:0,42,512	0/0:15,0:15:35.83:0,36,438	0/0:11,0:11:27.08:0,27,329	0/0:18,0:18:47.34:0,47,564	0/0:15,0:15:36.11:0,36,439	0/0:21,0:21:60.18:0,60,727	0/0:19,0:19:48.15:0,48,584	1/1:1,0:12:24.83:87,25,0	0/0:16,0:16:48.15:0,48,585	0/0:26,0:26:53.05:0,53,643	0/0:35,0:35:96.28:0,96,1156	0/0:24,0:24:48.15:0,48,585	0/0:13,0:13:33.09:0,33,390	0/0:24,0:22:48.13:0,48,583	0/0:15,0:15:45.14:0,45,548	1/1:3,11:15:24.08:379,24,0	0/0:15,0:15:15.04:0,15,183	1/1:2,13:17:27.09:443,27,0
chr10	83222884	.	CT	C	575.94	PASS	AB=0.866;AC=8;AF=0.143;AN=56;BaseQRankSum=4.408;DP=597;FS=3.981;HRun=13;HaplotypeScore=69.7332;InbreedingCoeff=0.3317;MQ=66.85;MQ0=0;MQRankSum=0.501;QD=5.01;ReadPosRankSum=2.883;VQSLOD=2.1079;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:28:50.60:0,51,285	0/0:6,0:6:14.99:0,15,131	0/1:15,1:10:6.36:6,0,43	0/0:10,0:7:3:0,3,27	0/0:16,1:17:6.48:0,6,210	0/1:11,3:14:32.69:33,0,194	0/0:6,2:28:16.74:0,17,274	0/0:26,3:30:15.96:0,16,434	0/1:11,2:13:16.78:17,0,173	0/0:29,0:29:55.28:0,55,504	0/0:19,0:19:20.18:0,20,218	0/0:18,0:21:44.89:0,45,415	0/0:20,0:21:45.85:0,46,411	0/0:11,0:11:30.03:0,30,281	0/1:20,5:25:30.56:31,0,375	0/0:18,0:18:36.01:0,36,326	0/0:29,0:34:56.71:0,57,515	0/0:17,1:18:9.97:0,10,261	0/0:16,1:21:8.99:0,9,199	0/0:18,2:24:21.90:0,22,356	0/0:23,2:26:19.02:0,19,465	0/0:10,1:11:2.12:0,2,177	0/0:23,0:23:54.03:0,54,500	0/0:26,2:28:25.21:0,25,545	0/0:26,2:28:10.24:0,10,408	1/1:13,20:33:33.38:408,33,0	0/0:27,1:29:34.13:0,34,496	1/1:3,10:14:31.86:225,32,0
chr10	83223337	.	TC	T	13253.88	PASS	AB=0.833;AC=53;AF=0.946;AN=56;BaseQRankSum=-3.493;DP=429;FS=19.160;HRun=3;HaplotypeScore=98.0940;InbreedingCoeff=0.6320;MQ=55.11;MQ0=0;MQRankSum=-3.064;QD=31.48;ReadPosRankSum=1.717;VQSLOD=3.1404;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:66.21:817,66,0	1/1:0,1:1:3.01:37,3,0	0/1:4,0:4:4.18:4,0,85	0/0:7,1:7:9.07:0,9,63	1/1:1,16:15:42.13:520,42,0	1/1:0,13:13:39.12:483,39,0	1/1:4,11:15:45.11:531,45,0	1/1:10,20:30:81.17:877,81,0	1/1:0,10:10:30.09:371,30,0	1/1:0,17:17:51.12:615,51,0	1/1:2,5:7:18.06:222,18,0	1/1:2,17:19:57.15:678,57,0	1/1:0,18:18:48.15:594,48,0	1/1:1,13:14:42.12:507,42,0	1/1:0,16:16:45.14:557,45,0	1/1:2,14:16:42.13:520,42,0	1/1:3,16:19:42.13:520,42,0	1/1:0,22:22:57.18:706,57,0	1/1:8,13:21:55.42:563,55,0	1/1:3,15:17:45.11:520,45,0	1/1:3,8:11:30.07:350,30,0	1/1:2,7:9:21.07:260,21,0	1/1:0,9:9:27.08:334,27,0	1/1:0,17:17:33.10:409,33,0	1/1:0,12:12:36.11:446,36,0	1/1:4,27:31:84.22:1013,84,0	1/1:3,20:22:47.78:614,48,0	1/1:0,7:7:15.05:186,15,0
chr10	83223342	.	G	GA	2037.25	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-4.746;DP=455;FS=4.138;HRun=10;HaplotypeScore=141.5158;InbreedingCoeff=0.8864;MQ=59.37;MQ0=0;MQRankSum=3.594;QD=17.56;ReadPosRankSum=-2.663;VQSLOD=1.9867;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:62.86:0,63,514	0/0:1,0:1:3:0,3,25	0/0:7,0:6:2.12:0,2,38	0/0:8,0:10:6.30:0,6,27	0/0:16,0:15:41.90:0,42,338	0/0:14,0:14:32.95:0,33,271	0/0:13,0:13:32.93:0,33,266	1/1:17,15:33:74.92:670,75,0	0/0:10,0:10:26.90:0,27,214	0/0:21,0:21:53.88:0,54,436	0/0:6,0:6:14.97:0,15,122	0/0:16,0:16:41.90:0,42,338	0/0:19,0:19:41.90:0,42,340	0/0:13,0:13:32.86:0,33,259	0/0:17,0:17:44.91:0,45,363	0/0:13,0:14:38:0,38,301	0/0:18,0:18:32.93:0,33,270	0/0:23,0:23:56.79:0,57,450	1/1:11,12:25:61.12:551,61,0	1/1:8,9:16:32.89:306,33,0	1/1:6,7:13:27:266,27,0	0/0:8,0:8:17.09:0,17,145	0/0:13,0:13:35.92:0,36,292	0/0:18,0:18:38.94:0,39,319	0/0:14,0:14:35.93:0,36,293	0/0:30,0:30:68.84:0,69,564	1/1:13,14:26:14.99:415,15,0	0/0:10,0:10:20.90:0,21,163
chr10	83224228	.	CTT	C	1242.59	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.670;DP=467;FS=6.092;HRun=9;HaplotypeScore=57.6017;InbreedingCoeff=0.8577;MQ=72.60;MQ0=0;MQRankSum=-0.381;QD=25.36;ReadPosRankSum=1.748;VQSLOD=2.9866;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,33:36:93.27:1084,93,0	0/0:3,0:3:9.03:0,9,148	0/0:15,0:9:15.47:0,15,177	0/0:14,0:10:10.06:0,10,170	0/0:11,0:11:24.08:0,24,385	0/0:28,0:28:75.20:0,75,1153	1/1:4,9:13:24.06:280,24,0	0/0:36,0:37:96.31:0,96,1529	0/0:19,0:19:54.18:0,54,886	0/0:18,0:18:54.18:0,54,870	0/0:7,0:7:14.94:0,15,211	0/0:18,0:18:51.15:0,51,786	0/0:10,0:10:30.10:0,30,492	0/0:22,0:22:66.21:0,66,1055	0/0:17,0:17:51.17:0,51,834	0/0:23,0:23:63.22:0,63,1025	0/0:33,0:33:84.29:0,84,1377	0/0:15,0:15:36.12:0,36,573	0/0:25,0:26:66.08:0,66,1022	0/0:3,0:3:9.03:0,9,148	0/0:9,0:9:24.08:0,24,391	0/0:3,0:3:6.02:0,6,97	0/0:6,0:6:18.05:0,18,264	0/0:14,0:14:36.12:0,36,591	0/0:15,0:15:33.10:0,33,519	0/0:22,0:22:54.17:0,54,860	0/0:16,0:16:42.14:0,42,689	0/0:14,0:14:36.12:0,36,591
chr10	83225216	.	ACAGACAG	A	1166.95	PASS	AB=0.793;AC=4;AF=0.071;AN=56;BaseQRankSum=9.373;DP=869;FS=5.331;HRun=0;HaplotypeScore=220.4245;InbreedingCoeff=0.4158;MQ=61.48;MQ0=8;MQRankSum=-5.284;QD=21.61;ReadPosRankSum=0.413;VQSLOD=3.0524;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,111,1179	0/0:12,0:12:36.12:0,36,1270	0/0:29,0:24:61.12:0,61,925	0/0:25,0:16:47.89:0,48,717	0/0:30,0:30:77.24:0,77,1954	0/0:39,0:39:99:0,114,3891	0/0:37,0:37:99:0,111,3093	0/0:40,0:39:96.96:0,97,1242	0/0:28,0:28:84.28:0,84,2618	0/0:32,0:30:90.30:0,90,2667	0/0:31,0:29:68.20:0,68,1900	0/0:36,0:36:99:0,108,3218	0/0:30,0:30:90.31:0,90,3156	0/0:25,0:25:75.24:0,75,2030	0/0:33,0:33:99:0,99,3091	0/0:33,0:33:99:0,99,3077	0/0:49,0:49:99:0,144,4690	0/1:12,2:14:73.11:130,0,73	0/0:28,0:23:68.25:0,68,1226	0/0:15,0:15:44.66:0,45,1117	0/0:70,0:69:99:0,201,4402	0/0:30,0:30:87.29:0,87,2622	0/0:19,0:19:57.19:0,57,1574	0/0:38,0:38:99:0,114,3884	0/0:21,0:21:63.22:0,63,2225	0/1:19,13:32:99:830,0,180	0/0:33,0:32:64.25:0,64,1872	1/1:4,4:8:8.95:316,9,0
chr10	83225617	.	TA	T	6903.77	PASS	AB=0.813;AC=39;AF=0.696;AN=56;BaseQRankSum=6.412;DP=506;FS=17.954;HRun=10;HaplotypeScore=59.1235;InbreedingCoeff=0.8681;MQ=72.58;MQ0=1;MQRankSum=-1.158;QD=19.50;ReadPosRankSum=2.120;VQSLOD=3.9651;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,3:33:15:0,15,812	1/1:0,11:11:32.99:286,33,0	0/0:17,1:18:7.29:0,7,221	0/1:10,3:8:30.94:31,0,47	1/1:1,16:17:32.98:286,33,0	0/0:9,0:9:24.06:0,24,265	0/0:19,2:21:28.10:0,28,538	1/1:2,25:28:76.98:647,77,0	0/0:20,1:21:31.11:0,31,564	1/1:1,18:19:50.98:443,51,0	1/1:3,13:16:26.97:234,27,0	0/0:10,1:11:4.02:0,4,273	1/1:2,12:14:35.99:313,36,0	1/1:2,11:13:32.99:286,33,0	1/1:2,18:20:50.99:443,51,0	1/1:1,13:14:38.99:339,39,0	1/1:5,25:30:68.98:599,69,0	1/1:3,24:27:68.98:599,69,0	1/1:2,15:17:47.97:412,48,0	1/1:6,15:21:38.95:338,39,0	1/1:3,11:14:32.99:287,33,0	1/1:0,10:10:29.99:260,30,0	0/0:14,0:14:33.08:0,33,358	0/0:24,0:24:60.15:0,60,652	1/1:2,16:18:47.99:417,48,0	1/1:2,0:19:34.81:103,35,0	1/1:3,24:27:62.98:547,63,0	1/1:0,0:6:12.22:36,12,0
chr10	83226617	.	TTG	T	169.58	PASS	AB=0.902;AC=17;AF=0.386;AN=44;BaseQRankSum=1.660;DP=427;FS=4.405;HRun=0;HaplotypeScore=71.3990;InbreedingCoeff=0.1235;MQ=57.17;MQ0=23;MQRankSum=-0.417;QD=1.18;ReadPosRankSum=-0.788;VQSLOD=0.6275;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:2.52:0,3,23	0/0:2,0:2:3.01:0,3,44	./.	./.	0/1:8,4:12:31.82:47,0,32	0/1:14,0:14:24.77:25,0,39	0/0:23,0:22:4.35:0,4,28	./.	0/0:13,0:12:2.44:0,2,56	0/0:10,0:10:6.02:0,6,74	./.	0/0:14,0:13:2.49:0,2,43	0/0:6,0:5:3.48:0,3,45	0/0:19,1:19:8.99:0,9,93	0/1:16,0:16:2.54:3,0,39	0/1:11,4:14:19.68:20,0,102	0/1:31,1:32:40.80:41,0,203	./.	1/1:12,0:11:0.89:2,1,0	1/1:11,0:11:2.85:22,3,0	0/0:33,0:28:0:0,0,0	1/1:8,0:7:2.96:19,3,0	0/0:6,0:5:3.01:0,3,31	0/0:30,0:25:12.42:0,12,93	1/1:6,0:6:3.01:32,3,0	./.	1/1:8,0:7:5.85:46,6,0	1/1:10,0:8:8.52:42,9,0
chr10	83226636	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGA	T	746.74	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.939;DP=419;FS=6.047;HRun=0;HaplotypeScore=265.4163;InbreedingCoeff=0.4984;MQ=44.67;MQ0=45;MQRankSum=-2.620;QD=67.89;ReadPosRankSum=2.967;VQSLOD=1.6951;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:65.79:0,66,5228	0/0:1,0:1:3.01:0,3,490	0/0:19,0:5:6.02:0,6,330	0/0:17,0:6:6.02:0,6,373	0/0:11,0:11:21.07:0,21,2703	0/0:16,0:15:23.73:0,24,2603	0/0:22,0:21:46.04:0,46,3827	0/0:13,0:9:24.08:0,24,1060	0/0:14,0:13:24.04:0,24,2092	0/0:13,0:12:33.11:0,33,3406	0/0:10,0:9:12.04:0,12,1080	0/0:15,0:12:18.06:0,18,1820	0/0:8,0:6:12.04:0,12,1343	0/0:21,0:19:30.10:0,30,2481	0/0:16,0:15:18.04:0,18,1701	0/0:15,0:14:27.09:0,27,2772	0/0:31,0:30:75.21:0,75,7435	0/0:11,0:8:6.02:0,6,435	0/0:7,0:6:15.05:0,15,1622	0/0:9,0:9:18.06:0,18,1673	0/0:33,0:26:40.02:0,40,3563	0/0:8,0:6:12.04:0,12,937	0/0:7,0:6:12.04:0,12,1654	0/0:30,0:24:41.70:0,42,4872	0/0:8,0:8:12.04:0,12,1575	0/0:11,0:11:2.22:0,2,7	0/0:10,0:9:23.08:0,23,1808	1/1:6,5:7:9.03:830,9,0
chr10	83227635	.	GC	G	2797.73	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.970;DP=591;FS=4.949;HRun=2;HaplotypeScore=56.7947;InbreedingCoeff=0.9716;MQ=85.92;MQ0=0;MQRankSum=-4.783;QD=31.79;ReadPosRankSum=1.206;VQSLOD=3.2756;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,51:53:99:1829,141,0	0/0:4,0:4:12.04:0,12,180	0/0:13,0:13:39.13:0,39,565	0/0:25,0:25:72.14:0,72,999	0/0:24,0:24:69.23:0,69,1034	0/0:23,0:23:65.85:0,66,986	1/1:1,34:35:84.27:1091,84,0	0/0:18,0:18:54.18:0,54,810	0/0:22,0:22:66.22:0,66,988	0/0:15,0:15:42.14:0,42,624	0/0:11,0:11:33.10:0,33,474	0/0:20,0:20:60.20:0,60,895	0/0:12,0:12:33.11:0,33,493	0/0:16,0:16:48.16:0,48,719	0/0:19,0:19:48.16:0,48,719	0/0:20,0:20:60.19:0,60,880	0/0:56,0:56:99:0,169,2450	0/0:26,0:26:78.26:0,78,1158	0/0:27,0:27:81.24:0,81,1157	0/0:6,0:6:18.05:0,18,247	0/0:42,0:42:99:0,123,1781	0/0:15,0:15:45.15:0,45,674	0/0:6,0:6:18.06:0,18,269	0/0:28,0:28:84.27:0,84,1236	0/0:6,0:6:18.06:0,18,270	0/0:19,0:19:57.19:0,57,854	0/0:21,0:21:63.20:0,63,922	0/0:9,0:9:27.08:0,27,386
chr10	83227769	.	CTTT	C	1240.10	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.914;DP=454;FS=2.938;HRun=14;HaplotypeScore=76.2971;InbreedingCoeff=0.8795;MQ=77.28;MQ0=9;MQRankSum=-0.799;QD=18.24;ReadPosRankSum=3.827;VQSLOD=2.8759;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,36:47:88.42:992,88,0	0/0:3,0:3:6.02:0,6,113	0/0:24,0:18:20.97:0,21,206	0/0:16,0:13:15.55:0,16,241	0/0:8,0:8:20.97:0,21,321	0/0:13,0:16:42.10:0,42,681	1/1:5,10:18:35.82:369,36,0	0/0:22,0:24:40.24:0,40,548	0/0:11,0:11:15.01:0,15,246	0/0:10,0:9:18.02:0,18,274	0/0:7,0:8:16.29:0,16,242	0/0:20,0:22:48.08:0,48,782	0/0:11,0:14:36.06:0,36,551	0/0:16,0:16:39.06:0,39,586	0/0:20,0:22:48.16:0,48,838	0/0:20,0:20:38.98:0,39,513	0/0:25,0:26:64.06:0,64,1082	0/0:29,0:29:69.97:0,70,1217	0/0:17,0:17:45.14:0,45,793	0/0:8,0:10:21.02:0,21,308	0/0:13,0:15:30:0,30,408	0/0:7,0:7:16.25:0,16,248	0/0:3,0:3:9.03:0,9,169	0/0:21,0:21:54.18:0,54,966	0/0:7,0:8:23.92:0,24,347	0/0:16,0:15:39.52:0,40,539	0/0:10,0:10:21:0,21,306	0/0:7,0:5:15.05:0,15,281
chr10	83228856	.	TC	T	158.30	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.359;DP=698;FS=7.998;HRun=1;HaplotypeScore=79.2815;InbreedingCoeff=0.9396;MQ=59.42;MQ0=6;MQRankSum=-6.449;QD=7.54;ReadPosRankSum=1.063;VQSLOD=0.4109;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,2298	0/0:13,0:13:39.13:0,39,617	0/0:25,0:17:48.13:0,48,688	0/0:22,0:17:51.12:0,51,723	0/0:20,0:20:60.16:0,60,888	0/0:22,0:21:63.21:0,63,1007	0/0:24,0:24:72.23:0,72,1125	0/0:26,0:24:72.22:0,72,1089	0/0:29,0:29:87.30:0,87,1388	0/0:26,0:26:78.27:0,78,1247	0/0:13,0:13:36.11:0,36,550	0/0:25,0:25:75.26:0,75,1199	0/0:19,0:19:57.18:0,57,882	0/0:23,0:23:69.22:0,69,1078	0/0:34,0:34:99:0,102,1627	0/0:36,0:36:99:0,108,1704	0/0:29,0:29:84.29:0,84,1339	0/0:14,0:14:42.14:0,42,664	0/0:27,0:26:78.19:0,78,1153	0/0:19,0:19:57.18:0,57,870	0/0:58,0:58:99:0,169,2654	0/0:30,0:30:90.31:0,90,1435	0/0:13,0:13:39.13:0,39,623	0/0:33,0:32:99:0,99,1551	0/0:19,0:19:57.18:0,57,888	1/1:0,16:19:48.27:241,48,0	0/0:30,0:30:90.25:0,90,1367	1/1:0,2:2:5.68:28,6,0
chr10	83228860	.	AG	A	94.66	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.171;DP=676;FS=6.401;HRun=1;HaplotypeScore=76.6100;InbreedingCoeff=0.9385;MQ=59.46;MQ0=6;MQRankSum=-7.005;QD=4.51;ReadPosRankSum=1.139;VQSLOD=0.3973;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,2253	0/0:11,0:11:33.11:0,33,524	0/0:24,0:15:42.14:0,42,636	0/0:18,0:13:38.47:0,38,555	0/0:18,0:18:51.17:0,51,815	0/0:21,0:20:60.20:0,60,959	0/0:24,0:24:72.25:0,72,1151	0/0:28,0:26:78.27:0,78,1238	0/0:28,0:28:84.29:0,84,1332	0/0:27,0:27:81.28:0,81,1295	0/0:12,0:12:36.12:0,36,575	0/0:25,0:25:75.24:0,75,1176	0/0:18,0:18:54.18:0,54,863	0/0:21,0:21:63.20:0,63,981	0/0:33,0:33:99:0,99,1573	0/0:35,0:35:99:0,105,1679	0/0:28,0:28:81.28:0,81,1295	0/0:13,0:13:39.13:0,39,623	0/0:25,0:24:75.26:0,75,1188	0/0:19,0:19:57.18:0,57,874	0/0:55,0:55:99:0,157,2468	0/0:31,0:31:93.32:0,93,1485	0/0:16,0:16:48.16:0,48,747	0/0:31,0:30:93.32:0,93,1487	0/0:19,0:19:57.19:0,57,909	1/1:3,16:19:43.06:180,43,0	0/0:27,0:27:81.28:0,81,1294	1/1:0,2:2:5.60:26,6,0
chr10	83228863	.	TC	T	137.06	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.171;DP=676;FS=6.393;HRun=1;HaplotypeScore=76.1478;InbreedingCoeff=0.9403;MQ=59.42;MQ0=7;MQRankSum=-7.051;QD=6.53;ReadPosRankSum=1.073;VQSLOD=0.6584;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,147,2254	0/0:10,0:10:30.10:0,30,480	0/0:24,0:15:45.15:0,45,699	0/0:18,0:12:33.11:0,33,509	0/0:20,0:20:60.17:0,60,912	0/0:21,0:20:60.20:0,60,959	0/0:25,0:25:75.22:0,75,1148	0/0:33,0:31:90.21:0,90,1282	0/0:28,0:28:84.29:0,84,1343	0/0:27,0:27:81.28:0,81,1294	0/0:12,0:12:36.12:0,36,575	0/0:24,0:24:72.23:0,72,1125	0/0:18,0:18:54.18:0,54,861	0/0:19,0:19:57.19:0,57,909	0/0:34,0:34:99:0,102,1627	0/0:34,0:34:99:0,102,1580	0/0:27,0:27:81.28:0,81,1295	0/0:14,0:14:39.13:0,39,612	0/0:23,0:22:69.23:0,69,1093	0/0:19,0:19:57.19:0,57,911	0/0:54,0:54:99:0,153,2421	0/0:31,0:31:93.32:0,93,1487	0/0:16,0:16:48.16:0,48,767	0/0:30,0:29:90.31:0,90,1438	0/0:18,0:18:54.18:0,54,863	1/1:3,16:19:44.99:217,45,0	0/0:27,0:27:81.28:0,81,1295	1/1:0,2:2:5.78:32,6,0
chr10	83229900	.	TC	T	954.81	PASS	AB=0.810;AC=25;AF=0.446;AN=56;BaseQRankSum=2.039;DP=409;FS=12.979;HRun=12;HaplotypeScore=56.1441;InbreedingCoeff=0.1968;MQ=73.20;MQ0=1;MQRankSum=2.143;QD=3.74;ReadPosRankSum=2.349;VQSLOD=-0.3685;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:21,1:22:22.37:22,0,112	0/0:6,0:6:3.01:0,3,30	0/0:16,0:13:1.61:0,2,126	0/0:9,1:9:1.17:0,1,18	0/1:11,2:13:11.18:11,0,61	1/1:10,13:24:19.90:145,20,0	0/1:18,3:21:44.52:45,0,121	0/1:10,5:15:10.42:31,0,10	0/1:14,2:16:22.45:22,0,137	0/0:11,0:11:6.01:0,6,61	0/0:3,0:3:0.47:0,0,1	0/1:6,6:13:6.71:98,0,7	0/1:8,1:12:14.60:25,0,15	0/0:16,2:18:27:0,27,238	0/0:11,0:12:17.89:0,18,170	0/0:13,0:13:24.46:0,24,224	0/0:32,1:32:30.77:0,31,438	0/0:9,0:20:5.01:0,5,70	1/1:7,2:11:10.02:58,10,0	1/1:4,4:8:2.93:23,3,0	1/1:10,11:21:11.36:170,11,0	0/1:9,1:10:17.23:17,0,19	1/1:10,4:15:10.89:77,11,0	1/1:6,9:17:21.97:151,22,0	0/0:12,0:12:10.23:0,10,77	1/1:6,8:16:15.92:102,16,0	0/1:5,4:11:5.63:86,0,6	1/1:5,5:10:5.95:46,6,0
chr10	83230796	.	C	CT	3088.10	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=8.438;DP=567;FS=16.491;HRun=9;HaplotypeScore=71.8024;InbreedingCoeff=0.8961;MQ=70.33;MQ0=13;MQRankSum=-4.114;QD=13.20;ReadPosRankSum=-1.728;VQSLOD=1.4425;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:22:42.58:212,43,0	0/0:12,0:12:26.98:0,27,234	0/0:46,0:14:20.86:0,21,116	0/1:40,0:18:12.43:12,0,60	0/0:22,0:23:43.99:0,44,370	0/0:21,0:21:55.78:0,56,467	1/1:3,0:13:33.93:168,34,0	1/1:9,19:28:57.11:610,57,0	0/0:7,0:7:18:0,18,156	0/0:21,0:21:47.98:0,48,417	0/0:13,0:13:35.99:0,36,312	0/0:15,0:15:38.97:0,39,333	0/0:16,0:16:19.54:0,20,315	0/0:14,0:14:30.87:0,31,262	0/0:30,0:30:83.95:0,84,723	0/0:16,0:16:44.99:0,45,390	0/0:31,0:30:77.86:0,78,667	1/1:9,0:23:3.45:109,3,0	1/1:7,19:26:28.07:527,28,0	1/1:1,11:13:32.89:333,33,0	1/1:0,10:10:21.06:232,21,0	0/0:20,0:20:30.90:0,31,396	0/0:16,0:16:41.99:0,42,364	0/0:11,0:11:32.98:0,33,283	0/0:20,0:19:41.97:0,42,365	1/1:6,22:28:68.97:737,69,0	1/1:1,9:9:18.05:199,18,0	1/1:6,12:18:15.04:165,15,0
chr10	83231156	.	G	GAGCATCTCTCC	18480.63	PASS	AB=0.727;AC=19;AF=0.339;AN=56;BaseQRankSum=-4.001;DP=451;FS=20.762;HRun=0;HaplotypeScore=228.4026;InbreedingCoeff=0.8962;MQ=54.09;MQ0=1;MQRankSum=-8.912;QD=105.00;ReadPosRankSum=-3.001;VQSLOD=3.2533;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,12:23:57.17:2702,57,0	0/0:8,0:8:14.53:0,15,359	0/0:12,0:12:30.09:0,30,800	0/0:8,0:6:15.05:0,15,451	0/0:17,0:17:33.11:0,33,1090	0/0:20,0:20:48.12:0,48,1520	1/1:15,7:22:48.15:2038,48,0	1/1:33,8:41:99:4174,102,0	0/0:16,0:16:42.14:0,42,1468	0/0:18,0:18:45.11:0,45,1393	0/0:18,0:18:48.16:0,48,1624	0/0:15,0:15:42.10:0,42,1375	0/0:13,0:13:39.11:0,39,1208	0/0:20,0:20:48.16:0,48,1672	0/0:20,0:20:51.12:0,51,1572	0/0:18,0:18:48.14:0,48,1340	0/0:20,0:20:45.09:0,45,1420	1/1:5,6:11:24.07:1219,24,0	1/1:5,5:10:30.10:1416,30,0	1/1:9,10:19:39.09:2063,39,0	1/1:5,2:7:8.99:346,9,0	0/0:11,0:11:27.05:0,27,828	0/0:13,0:12:24.08:0,24,783	0/0:12,0:11:27.09:0,27,935	0/0:16,0:16:39.13:0,39,1333	0/1:10,6:16:23.73:1489,0,24	1/1:16,8:23:60.16:2773,60,0	1/1:3,0:3:9.03:261,9,0
chr10	83231171	.	TG	T	5514.36	PASS	AB=0.987;AC=37;AF=0.661;AN=56;BaseQRankSum=1.231;DP=400;FS=6.181;HRun=1;HaplotypeScore=181.4926;InbreedingCoeff=-0.1440;MQ=50.94;MQ0=0;MQRankSum=-4.345;QD=14.55;ReadPosRankSum=-7.791;VQSLOD=1.3609;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:39.04:484,39,0	0/0:8,0:8:12.88:0,13,50	1/1:4,2:6:14.82:135,15,0	0/1:2,0:2:2.13:2,0,31	0/1:13,0:13:11.70:88,0,12	0/1:20,0:20:15.61:16,0,129	1/1:1,14:15:35.98:421,36,0	1/1:7,24:31:93.06:1127,93,0	0/1:15,0:15:34.60:35,0,81	0/1:18,2:20:49.48:97,0,49	0/1:20,1:21:23.78:24,0,92	0/1:16,1:17:40.74:106,0,41	0/1:14,0:14:16.67:17,0,72	0/1:18,0:18:51.90:52,0,93	0/1:19,0:19:8.30:8,0,83	0/1:13,0:13:8.09:8,0,79	0/1:18,0:18:16.20:16,0,68	1/1:0,9:9:24.08:328,24,0	1/1:1,9:10:24.64:363,25,0	1/1:0,20:20:45.15:613,45,0	1/1:0,3:3:5.98:61,6,0	0/1:10,0:10:30.50:35,0,30	0/1:13,0:12:39.43:39,0,49	0/0:13,0:12:19.15:0,19,66	0/1:21,0:21:63.89:116,0,64	1/1:3,14:17:30.39:532,30,0	1/1:1,17:18:54.14:710,54,0	1/1:0,2:2:6.02:82,6,0
chr10	83231360	.	GAACA	G	479.53	PASS	AB=0.600;AC=1;AF=0.019;AN=54;BaseQRankSum=4.165;DP=533;FS=1.078;HRun=0;HaplotypeScore=98.1637;InbreedingCoeff=-0.0190;MQ=81.02;MQ0=1;MQRankSum=-2.343;QD=26.64;ReadPosRankSum=-1.376;VQSLOD=3.0884;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:72.16:0,72,1724	0/0:9,0:9:24.07:0,24,574	0/0:31,0:27:48.77:0,49,1202	0/0:26,0:21:41.90:0,42,731	0/0:15,0:15:39.13:0,39,975	0/0:20,0:20:54.18:0,54,1372	0/0:18,0:18:45.15:0,45,1135	0/0:29,0:29:78.26:0,78,1871	0/0:18,0:18:48.14:0,48,1153	0/0:18,0:18:48.16:0,48,1257	0/0:18,0:18:51.16:0,51,1272	0/0:28,0:28:81.26:0,81,1971	0/0:19,0:19:45.15:0,45,1172	0/0:10,0:10:27.09:0,27,645	0/0:25,0:25:72.25:0,72,1838	0/0:18,0:18:51.18:0,51,1304	0/0:29,0:29:81.26:0,81,2027	0/0:18,0:18:45.15:0,45,1124	0/0:24,0:24:66.23:0,66,1682	0/0:20,0:20:54.19:0,54,1347	0/0:13,0:13:36.12:0,36,911	0/0:15,0:15:42.10:0,42,925	0/0:13,0:13:36.12:0,36,924	0/0:14,0:14:39.10:0,39,911	0/0:11,0:11:30.10:0,30,786	0/1:6,12:18:99:554,0,115	0/0:24,0:23:66.23:0,66,1614	./.
chr10	83231381	.	GA	G	783.35	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.236;DP=589;FS=0.554;HRun=10;HaplotypeScore=87.2580;InbreedingCoeff=0.8866;MQ=72.34;MQ0=1;MQRankSum=-2.432;QD=17.03;ReadPosRankSum=-0.322;VQSLOD=3.8341;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,17:28:59.01:500,59,0	0/0:11,0:11:24.78:0,25,247	0/0:38,1:25:16.85:0,17,367	0/0:34,1:25:28.08:0,28,285	0/0:16,0:16:39.11:0,39,431	0/0:22,1:23:37.12:0,37,635	1/1:5,13:18:47.91:405,48,0	0/0:30,1:31:17.67:0,18,643	0/0:15,0:15:19.24:0,19,430	0/0:22,0:22:57.13:0,57,613	0/0:20,0:20:53.34:0,53,563	0/0:26,0:26:60.16:0,60,663	0/0:22,0:22:54.12:0,54,575	0/0:12,0:12:36.02:0,36,368	0/0:32,0:32:81.15:0,81,860	0/0:25,0:25:66.59:0,67,699	0/0:28,0:29:71.91:0,72,750	0/0:12,0:12:27.75:0,28,328	0/0:26,1:29:45.80:0,46,683	0/0:21,0:21:51.08:0,51,529	0/0:17,0:17:33.07:0,33,349	0/0:14,1:15:10.90:0,11,327	0/0:13,0:13:27.04:0,27,276	0/0:16,0:16:42.05:0,42,449	0/0:14,0:14:39.10:0,39,421	0/0:25,0:24:53.97:0,54,728	0/0:19,0:20:53.96:0,54,562	0/0:1,0:1:2.98:0,3,22
chr10	83231405	.	TA	T	2556.93	PASS	AB=0.923;AC=24;AF=0.429;AN=56;BaseQRankSum=3.483;DP=535;FS=15.165;HRun=12;HaplotypeScore=88.8355;InbreedingCoeff=0.6938;MQ=66.10;MQ0=0;MQRankSum=0.342;QD=9.69;ReadPosRankSum=-1.900;VQSLOD=0.7855;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,18:25:5.73:343,6,0	0/1:8,1:9:6.09:6,0,153	0/1:26,1:15:7.58:8,0,114	0/1:27,1:22:7.85:8,0,92	0/0:15,0:15:30:0,30,292	0/0:21,0:21:48.02:0,48,469	1/1:7,8:15:6.77:183,7,0	1/1:11,16:27:41.51:323,42,0	0/0:14,0:14:30.02:0,30,294	0/0:22,1:25:23.71:0,24,386	0/0:17,0:19:35.84:0,36,350	0/0:17,0:18:38.86:0,39,363	0/0:22,0:22:48.09:0,48,482	0/0:11,0:11:24.03:0,24,233	0/0:29,1:30:20.95:0,21,522	0/0:23,0:23:38.96:0,39,442	0/0:24,1:25:18.85:0,19,373	1/1:4,5:9:14.92:114,15,0	1/1:7,17:24:47.76:371,48,0	1/1:4,14:18:41.81:325,42,0	1/1:2,13:15:29.88:232,30,0	0/0:14,1:15:8.60:0,9,267	0/1:11,1:12:16.13:16,0,214	0/0:16,1:17:9.83:0,10,281	0/0:14,1:16:18.68:0,19,357	1/1:7,16:23:44.78:348,45,0	1/1:6,13:20:37.72:275,38,0	1/1:0,9:10:28.93:215,29,0
chr10	83231473	.	A	AG	13965.10	PASS	AB=0.923;AC=55;AF=0.982;AN=56;BaseQRankSum=0.413;DP=515;FS=0.000;HRun=2;HaplotypeScore=184.8886;InbreedingCoeff=-0.0195;MQ=60.54;MQ0=0;MQRankSum=-2.907;QD=27.12;ReadPosRankSum=0.385;VQSLOD=4.2715;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,7:30:71.60:749,72,0	1/1:8,0:8:20.81:175,21,0	1/1:13,4:17:28.54:230,29,0	0/1:11,1:11:19.98:71,0,20	1/1:7,6:13:20.90:232,21,0	1/1:14,2:16:47.97:547,48,0	1/1:15,11:26:65.94:751,66,0	1/1:1,23:24:71.99:712,72,0	1/1:12,7:19:56.95:625,57,0	1/1:21,6:27:74.32:850,74,0	1/1:9,1:10:11.90:110,12,0	1/1:14,5:19:50.87:542,51,0	1/1:15,4:19:54.65:616,55,0	1/1:10,4:14:35.99:408,36,0	1/1:20,6:26:74.66:798,75,0	1/1:18,3:21:63.08:726,63,0	1/1:18,6:24:62.86:713,63,0	1/1:9,2:11:27.03:305,27,0	1/1:14,10:24:66.10:805,66,0	1/1:10,4:14:35.47:284,35,0	1/1:15,4:19:47.81:532,48,0	1/1:14,2:16:29.69:302,30,0	1/1:10,4:14:29.86:302,30,0	1/1:14,7:21:51.62:632,52,0	1/1:18,7:25:67.68:703,68,0	1/1:8,6:14:35.86:372,36,0	1/1:15,4:19:44.67:478,45,0	1/1:6,7:13:36.01:396,36,0
chr10	83233050	.	ACT	A	366.49	PASS	AB=0.932;AC=11;AF=0.196;AN=56;BaseQRankSum=8.369;DP=774;FS=4.465;HRun=0;HaplotypeScore=137.6303;InbreedingCoeff=-0.0630;MQ=66.70;MQ0=12;MQRankSum=-2.642;QD=1.81;ReadPosRankSum=0.615;VQSLOD=2.5235;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:20.07:0,20,158	0/1:7,0:7:23.52:24,0,92	0/0:43,0:16:11.71:0,12,143	0/0:75,0:29:19.59:0,20,164	0/0:24,0:24:54.14:0,54,783	0/1:16,2:19:21.07:21,0,613	0/0:22,0:22:9.38:0,9,75	0/0:36,0:35:33.52:0,34,675	0/0:20,1:21:15.61:0,16,697	0/0:32,0:32:72.23:0,72,1063	0/1:18,2:20:28.95:29,0,519	0/0:28,2:30:21.64:0,22,782	0/0:24,2:26:3.98:0,4,720	0/0:27,0:27:48.15:0,48,733	0/1:30,3:33:31.36:31,0,943	0/0:36,0:36:87.28:0,87,1339	0/0:34,0:34:33.87:0,34,960	0/0:19,0:19:35.84:0,36,319	0/0:34,0:33:14.85:0,15,458	0/0:36,0:36:33.42:0,33,474	0/1:13,0:15:17.03:43,0,17	0/1:25,3:28:49.10:49,0,646	0/1:15,2:17:43.94:44,0,301	0/0:22,0:23:54.15:0,54,808	0/0:17,0:17:42.14:0,42,662	0/1:26,0:26:15.69:137,0,16	0/1:23,3:26:99:106,0,295	1/1:11,0:11:6.85:31,7,0
chr10	83233061	.	C	CTA	1315.23	PASS	AB=0.871;AC=7;AF=0.125;AN=56;BaseQRankSum=9.289;DP=780;FS=6.950;HRun=0;HaplotypeScore=146.7724;InbreedingCoeff=0.7263;MQ=61.42;MQ0=16;MQRankSum=0.312;QD=11.44;ReadPosRankSum=-0.395;VQSLOD=3.1118;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,6:38:1.91:414,0,2	0/0:6,0:6:17.99:0,18,188	0/0:39,0:12:9.81:0,10,186	0/0:76,0:25:18.56:0,19,315	0/0:23,0:22:63.11:0,63,830	0/0:23,0:23:46.16:0,46,750	1/1:24,2:26:13.18:223,13,0	0/0:33,0:31:62.27:0,62,800	0/0:21,0:21:60.07:0,60,801	0/0:30,0:30:90.11:0,90,1200	0/0:17,0:17:48.06:0,48,640	0/0:32,0:32:80.73:0,81,1013	0/0:29,0:29:61.91:0,62,943	0/0:21,0:21:63.11:0,63,830	0/0:35,0:35:99:0,105,1291	0/0:34,0:34:99:0,99,1395	0/0:33,0:33:98.97:0,99,1218	0/1:12,6:18:0.79:356,0,1	0/0:35,0:34:86.54:0,87,954	0/0:35,0:35:53.78:0,54,665	0/0:21,0:21:32.13:0,32,247	0/0:32,0:32:87.01:0,87,997	0/0:22,0:22:53.86:0,54,574	0/0:22,0:23:66.13:0,66,896	0/0:18,0:18:50.91:0,51,716	1/1:25,0:25:30.99:418,31,0	0/0:27,0:27:68.87:0,69,768	0/1:8,0:8:1.99:44,0,2
chr10	83233072	.	TCG	T	2206.10	PASS	AB=0.988;AC=17;AF=0.304;AN=56;BaseQRankSum=14.853;DP=735;FS=1.601;HRun=0;HaplotypeScore=136.6773;InbreedingCoeff=0.4156;MQ=57.64;MQ0=20;MQRankSum=-4.683;QD=6.87;ReadPosRankSum=-4.266;VQSLOD=2.1785;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:26.03:271,26,0	0/1:5,0:5:0.75:1,0,126	0/0:37,0:7:4.94:0,5,53	0/1:64,0:12:37.93:38,0,38	0/0:22,0:21:57.14:0,57,914	0/0:26,1:27:37.53:0,38,882	1/1:23,0:23:14.92:230,15,0	0/1:29,0:27:83.08:83,0,462	0/0:22,0:22:47.41:0,47,930	0/0:29,0:29:77.83:0,78,1148	0/0:19,0:19:27.42:0,27,646	0/0:30,0:30:58.18:0,58,979	0/0:27,0:27:48.37:0,48,960	0/0:18,0:18:54.12:0,54,892	0/0:31,0:31:55.72:0,56,1260	0/0:35,0:35:99:0,102,1605	0/0:24,0:24:55.63:0,56,1140	0/1:18,1:19:20.41:121,0,20	0/1:30,1:30:99:161,0,244	0/1:31,0:31:64.45:64,0,338	1/1:17,3:20:22.72:333,23,0	0/0:30,0:30:41.06:0,41,930	0/0:20,0:20:20.57:0,21,466	0/0:22,0:22:66.12:0,66,1069	0/0:19,0:19:53.66:0,54,834	1/1:19,7:29:80.64:800,81,0	0/1:28,0:28:99:154,0,232	1/1:1,2:5:14.95:135,15,0
chr10	83233143	.	G	GTC	7968.90	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-7.206;DP=794;FS=2.968;HRun=0;HaplotypeScore=133.0179;InbreedingCoeff=0.9325;MQ=76.30;MQ0=11;MQRankSum=-1.780;QD=31.25;ReadPosRankSum=-3.001;VQSLOD=5.7666;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,19:30:60.19:951,60,0	0/0:5,0:5:12.04:0,12,150	0/0:62,0:28:34.44:0,34,372	0/0:111,0:54:52.56:0,53,486	0/0:18,0:18:48.15:0,48,600	0/0:22,0:22:54.15:0,54,656	1/1:9,15:24:42.14:690,42,0	1/1:10,22:33:69.19:1051,69,0	0/0:24,0:24:66.17:0,66,796	0/0:27,0:27:78.24:0,78,963	0/0:15,0:15:39.11:0,39,476	0/0:35,0:35:84.27:0,84,1049	0/0:31,0:31:55.25:0,55,887	0/0:18,0:18:45.14:0,45,563	0/0:30,0:30:75.24:0,75,938	0/0:28,0:28:75.21:0,75,921	0/0:26,0:26:59.56:0,60,768	1/1:5,12:17:2.58:558,3,0	1/1:10,16:26:15.99:721,16,0	1/1:8,17:25:1.59:544,2,0	1/1:4,27:32:34.72:1102,35,0	0/0:26,0:26:72.17:0,72,858	0/0:18,0:18:48.15:0,48,600	0/0:26,0:26:66.19:0,66,811	0/0:17,0:17:48.15:0,48,600	1/1:3,21:24:63.21:1015,63,0	1/1:6,23:29:57.19:941,57,0	1/1:1,10:13:24.08:396,24,0
chr10	83233215	.	G	GTCTGTC	155.51	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=4.463;DP=849;FS=10.080;HRun=0;HaplotypeScore=184.3458;InbreedingCoeff=0.6107;MQ=64.79;MQ0=17;MQRankSum=1.653;QD=1.67;ReadPosRankSum=-2.479;VQSLOD=1.7657;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,24:33:5.62:131,6,0	0/0:6,0:6:18.06:0,18,392	0/0:53,0:18:22.92:0,23,303	0/0:64,0:31:14.29:0,14,500	0/0:17,0:17:45.13:0,45,878	0/0:16,0:15:39.13:0,39,713	1/1:3,20:24:2.86:106,3,0	0/0:27,0:24:61.20:0,61,599	0/0:28,0:28:72.24:0,72,1550	0/0:31,0:30:87.28:0,87,1835	0/0:32,0:32:90.30:0,90,1768	0/0:32,0:32:90.28:0,90,1850	0/0:32,0:32:87.26:0,87,1598	0/0:27,0:27:81.21:0,81,1448	0/0:33,0:33:99:0,99,1957	0/0:39,0:39:99:0,117,2319	0/0:35,0:35:99:0,99,1867	0/1:30,0:29:25.86:26,0,511	0/0:28,0:26:56.66:0,57,632	0/0:30,0:30:77.49:0,77,1142	0/0:39,0:38:95.45:0,95,1430	0/0:27,0:27:81.05:0,81,1627	0/0:25,0:25:66.19:0,66,1366	0/0:38,0:38:99:0,108,2154	0/0:34,0:34:90.27:0,90,1754	0/0:27,0:27:77.13:0,77,1131	0/0:22,0:22:56.96:0,57,928	0/0:12,0:12:29.85:0,30,409
chr10	83233240	.	T	TCA	590.40	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.228;DP=893;FS=1.791;HRun=0;HaplotypeScore=123.3707;InbreedingCoeff=0.9337;MQ=69.26;MQ0=10;MQRankSum=1.105;QD=20.36;ReadPosRankSum=-0.590;VQSLOD=3.4847;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:35:26.29:0,26,296	0/0:7,0:7:18.06:0,18,225	0/0:50,0:23:23.92:0,24,341	0/0:65,0:37:9.62:0,10,480	0/0:26,0:26:66.14:0,66,759	0/0:19,0:19:48.12:0,48,573	0/0:27,0:26:17.96:0,18,180	0/0:32,0:31:38.20:0,38,699	0/0:28,0:28:67.46:0,67,820	0/0:32,0:32:84.14:0,84,988	0/0:28,0:28:72.20:0,72,874	0/0:30,0:30:72.21:0,72,885	0/0:41,0:41:99:0,114,1385	0/0:31,0:31:87.22:0,87,1025	0/0:36,0:36:96.27:0,96,1162	0/0:46,0:46:99:0,132,1609	0/0:40,0:40:99:0,105,1248	1/1:4,25:28:42.14:685,42,0	0/0:27,0:25:57.14:0,57,651	0/0:29,0:29:72.20:0,72,874	0/0:40,0:39:96.20:0,96,1103	0/0:30,0:30:78.23:0,78,961	0/0:22,0:22:57.17:0,57,699	0/0:30,0:30:81.24:0,81,999	0/0:36,0:36:78.22:0,78,950	0/0:29,0:29:81.06:0,81,941	0/0:25,0:25:54.12:0,54,650	0/0:17,0:17:45.07:0,45,495
chr10	83233868	.	GA	G	3850.33	PASS	AB=0.781;AC=20;AF=0.357;AN=56;BaseQRankSum=11.063;DP=550;FS=5.985;HRun=11;HaplotypeScore=57.3544;InbreedingCoeff=0.7287;MQ=61.53;MQ0=4;MQRankSum=0.395;QD=14.37;ReadPosRankSum=0.648;VQSLOD=3.8160;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,35:39:99:815,100,0	0/0:9,0:9:24.05:0,24,250	0/1:11,0:5:2.44:2,0,62	0/0:14,0:9:20.54:0,21,182	0/0:25,1:26:32.51:0,33,544	0/0:12,0:12:35.94:0,36,359	0/1:9,16:25:13.78:297,0,14	1/1:6,32:39:94.73:746,95,0	0/0:27,0:26:72.13:0,72,747	0/0:17,0:17:51.13:0,51,544	0/0:18,1:19:23.48:0,23,455	0/0:17,0:17:50.55:0,51,502	0/0:14,0:14:36.09:0,36,383	0/1:15,2:17:1.16:1,0,400	0/0:27,0:26:69.17:0,69,736	0/0:14,0:14:38.93:0,39,398	0/0:32,1:34:62.38:0,62,837	1/1:3,20:23:53.88:437,54,0	0/1:7,11:18:25.31:232,0,25	1/1:0,22:22:62.92:517,63,0	1/1:1,17:18:13.28:313,13,0	0/0:11,0:11:27.06:0,27,282	0/0:12,0:11:30.08:0,30,320	0/0:16,0:16:45.11:0,45,480	0/0:13,0:13:33.08:0,33,351	1/1:3,0:23:9.78:79,10,0	1/1:4,16:20:49.20:382,49,0	1/1:1,0:11:10.18:29,10,0
chr10	83235040	.	CTT	C	4507.14	PASS	AB=0.938;AC=21;AF=0.375;AN=56;BaseQRankSum=11.821;DP=557;FS=0.743;HRun=11;HaplotypeScore=82.6959;InbreedingCoeff=0.9040;MQ=71.36;MQ0=5;MQRankSum=-0.667;QD=21.16;ReadPosRankSum=1.720;VQSLOD=4.4049;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:59.87:610,60,0	0/0:5,0:5:15.05:0,15,231	0/0:33,0:18:19.02:0,19,154	0/1:14,1:11:23.54:24,0,79	0/0:25,0:25:63.16:0,63,888	0/0:27,0:27:75.22:0,75,1085	1/1:5,15:20:28.64:431,29,0	1/1:32,0:32:83.81:777,84,0	0/0:13,0:13:36.07:0,36,527	0/0:24,0:24:54.18:0,54,800	0/0:26,0:27:60.16:0,60,877	0/0:16,0:16:42.14:0,42,639	0/0:23,0:23:50.75:0,51,714	0/0:10,0:10:24.08:0,24,366	0/0:18,0:18:47.52:0,48,676	0/0:17,0:17:48.15:0,48,697	0/0:27,0:27:66.22:0,66,999	1/1:21,0:21:53.98:482,54,0	1/1:21,0:21:25.80:357,26,0	1/1:19,0:19:32.51:419,33,0	1/1:2,0:2:6.01:56,6,0	0/0:21,0:21:54.17:0,54,769	0/0:20,0:20:57.16:0,57,814	0/0:16,0:16:39.12:0,39,570	0/0:19,0:20:48.14:0,48,690	1/1:2,7:9:21.04:223,21,0	1/1:29,0:29:67.54:587,68,0	1/1:3,19:21:51.11:543,51,0
chr10	83235051	.	TC	T	3754.67	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.111;DP=520;FS=0.792;HRun=1;HaplotypeScore=72.5839;InbreedingCoeff=0.8894;MQ=68.24;MQ0=4;MQRankSum=-1.049;QD=30.53;ReadPosRankSum=-0.954;VQSLOD=3.1074;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:16.10:0,16,139	0/0:6,0:6:18.04:0,18,192	0/0:33,1:19:5.12:0,5,115	0/0:14,0:9:3.40:0,3,116	0/0:22,0:22:58.79:0,59,566	0/0:26,0:26:77.86:0,78,796	0/0:17,0:17:27.11:0,27,123	1/1:1,33:34:94.77:999,95,0	0/0:12,0:12:35.77:0,36,378	0/0:21,0:21:56.14:0,56,579	0/0:20,0:20:53.02:0,53,570	0/0:16,0:16:48.05:0,48,493	0/0:19,0:19:40.72:0,41,505	0/0:10,0:10:27.05:0,27,286	0/0:20,0:20:50.68:0,51,526	0/0:16,0:16:44.17:0,44,485	0/0:24,0:24:71.81:0,72,720	1/1:0,23:23:54.18:704,54,0	1/1:6,12:17:47.45:516,47,0	1/1:1,17:18:53.31:563,53,0	1/1:1,2:3:8.76:90,9,0	0/0:19,0:19:54.46:0,54,525	0/0:20,0:20:60.10:0,60,627	0/0:14,0:14:28.06:0,28,386	0/0:16,0:16:39.23:0,39,420	0/0:7,0:7:2.05:0,2,45	1/1:1,26:27:69.12:883,69,0	0/0:19,0:18:35.39:0,35,118
chr10	83236127	.	GT	G	1260.51	PASS	AB=0.852;AC=6;AF=0.107;AN=56;BaseQRankSum=9.645;DP=601;FS=4.386;HRun=10;HaplotypeScore=59.5322;InbreedingCoeff=0.5791;MQ=71.44;MQ0=0;MQRankSum=-2.743;QD=13.27;ReadPosRankSum=2.501;VQSLOD=3.6648;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,39:42:99:892,104,0	0/0:7,0:7:18.05:0,18,199	0/1:8,3:12:50.62:51,0,91	0/0:17,0:16:15.97:0,16,204	0/0:25,0:25:63.17:0,63,694	0/0:21,1:22:28.05:0,28,525	1/1:2,20:22:50.99:443,51,0	0/0:26,2:28:14.06:0,14,604	0/0:17,2:19:2.08:0,2,479	0/0:29,2:31:46.95:0,47,732	0/0:14,0:14:33.08:0,33,360	0/0:19,1:20:31.10:0,31,571	0/0:25,0:25:60.14:0,60,650	0/0:19,0:19:51.14:0,51,564	0/0:28,2:30:58.17:0,58,870	0/0:22,0:23:59.98:0,60,637	0/0:26,0:27:75.04:0,75,811	0/0:16,0:16:42.03:0,42,438	0/0:27,2:29:23.08:0,23,703	0/0:19,0:19:54.15:0,54,597	0/0:16,0:16:42.08:0,42,445	0/0:14,0:14:33.07:0,33,349	0/1:17,2:19:10:10,0,356	0/0:18,0:18:45.12:0,45,498	0/0:21,1:22:31.03:0,31,557	0/0:27,1:28:72.19:0,72,796	0/0:21,0:21:54.11:0,54,583	0/0:16,0:16:33.09:0,33,362
chr10	83236269	.	TG	T	5555.90	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.924;DP=613;FS=2.313;HRun=8;HaplotypeScore=62.7000;InbreedingCoeff=0.9964;MQ=71.05;MQ0=2;MQRankSum=-0.742;QD=24.16;ReadPosRankSum=-1.406;VQSLOD=5.0625;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,32:40:99:1070,111,0	0/0:9,0:9:21.06:0,21,244	0/0:20,0:15:22.66:0,23,308	0/0:17,0:13:21.06:0,21,242	0/0:28,0:28:81.24:0,81,968	0/0:22,0:22:60.17:0,60,713	1/1:1,26:27:69.53:657,70,0	1/1:3,27:30:75.03:695,75,0	0/0:18,0:18:48.13:0,48,559	0/0:20,0:20:51.16:0,51,616	0/0:18,0:18:54.15:0,54,639	0/0:19,0:19:51.14:0,51,603	0/0:10,0:10:24.07:0,24,290	0/0:19,0:19:54.13:0,54,627	0/0:23,0:23:63.17:0,63,738	0/0:17,0:17:45.14:0,45,544	0/0:32,0:32:78.24:0,78,940	1/1:1,30:31:87.14:840,87,0	1/1:5,19:23:54.03:503,54,0	1/1:6,13:19:39.04:371,39,0	1/1:2,31:33:81.13:782,81,0	0/0:29,0:29:47.82:0,48,821	0/0:14,0:14:36.02:0,36,403	0/0:17,0:17:48.10:0,48,543	0/0:23,0:23:60.09:0,60,695	0/0:21,0:21:54.15:0,54,633	1/1:4,22:26:66.10:637,66,0	0/0:7,0:7:18.06:0,18,217
chr10	83236346	.	CG	C	5064.05	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=9.158;DP=596;FS=19.019;HRun=7;HaplotypeScore=69.4614;InbreedingCoeff=0.9852;MQ=73.91;MQ0=2;MQRankSum=2.263;QD=24.95;ReadPosRankSum=0.420;VQSLOD=3.2813;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,47:52:99:1400,141,0	0/0:5,0:5:9.03:0,9,113	0/0:24,0:17:21.18:0,21,190	0/0:25,0:18:15.75:0,16,159	0/0:23,0:23:53.30:0,53,587	0/0:19,0:19:46.37:0,46,543	1/1:3,8:11:18.04:183,18,0	1/1:4,24:28:68.25:636,68,0	0/0:16,0:16:42.08:0,42,486	0/0:20,0:20:42.12:0,42,502	0/0:16,0:16:30.04:0,30,324	0/0:20,0:20:60.11:0,60,686	0/0:14,0:14:39.07:0,39,426	0/0:20,0:20:53.69:0,54,629	0/0:22,0:22:63.20:0,63,791	0/0:18,0:18:51.16:0,51,641	0/0:33,0:33:84.19:0,84,968	1/1:7,22:29:78.03:749,78,0	1/1:9,9:18:42.04:403,42,0	1/1:6,10:16:39.01:363,39,0	1/1:9,24:33:87.10:852,87,0	0/0:27,0:27:65.74:0,66,783	0/0:22,0:22:57.10:0,57,646	0/0:17,0:17:51.09:0,51,588	0/0:11,0:11:21.04:0,21,264	0/0:26,0:26:60.12:0,60,699	1/1:2,14:16:48.09:479,48,0	0/0:13,0:13:36.08:0,36,424
chr10	83236616	.	G	GA	9175.81	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-15.519;DP=651;FS=13.856;HRun=4;HaplotypeScore=59.7453;InbreedingCoeff=0.9974;MQ=91.52;MQ0=0;MQRankSum=-4.578;QD=34.63;ReadPosRankSum=1.272;VQSLOD=4.2035;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,50:51:99:1699,126,0	0/0:7,0:7:15.04:0,15,170	0/0:25,0:25:72.20:0,72,812	0/0:29,0:29:72.19:0,72,810	0/0:22,0:22:63.18:0,63,714	0/0:16,0:16:48.08:0,48,520	1/1:3,19:22:48.16:657,48,0	1/1:2,26:28:78.25:1051,78,0	0/0:18,0:18:48.12:0,48,534	0/0:15,0:15:42.12:0,42,475	0/0:11,0:11:33.09:0,33,374	0/0:30,0:30:72.20:0,72,811	0/0:26,0:26:66.07:0,66,711	0/0:20,0:20:57.16:0,57,646	0/0:34,0:34:99:0,102,1137	0/0:22,0:22:57.16:0,57,646	0/0:30,0:30:87.25:0,87,987	1/1:2,24:26:66.22:903,66,0	1/1:3,16:19:51.10:639,51,0	1/1:0,18:18:48.16:656,48,0	1/1:3,42:45:99:1580,117,0	0/0:29,0:29:78.20:0,78,873	0/0:22,0:22:63.15:0,63,694	0/0:18,0:18:51.15:0,51,578	0/0:12,0:12:32.88:0,33,353	1/1:0,20:20:60.18:803,60,0	1/1:2,23:25:60.20:820,60,0	1/1:1,10:11:27.09:369,27,0
chr10	83236781	.	T	TTCTCTC	2485.33	PASS	AB=0.968;AC=12;AF=0.214;AN=56;BaseQRankSum=6.423;DP=542;FS=5.139;HRun=0;HaplotypeScore=131.4435;InbreedingCoeff=0.0566;MQ=73.30;MQ0=7;MQRankSum=-4.171;QD=11.00;ReadPosRankSum=-2.499;VQSLOD=2.0758;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:9.17:69,0,9	0/0:10,0:10:16.28:0,16,298	0/0:19,0:15:33.09:0,33,637	0/1:39,0:29:3.22:3,0,1060	0/0:9,0:9:21:0,21,425	0/0:18,0:17:39.05:0,39,625	0/1:21,0:21:70.75:190,0,71	0/1:11,10:21:45.88:465,0,46	0/0:19,0:19:54.15:0,54,1074	0/0:25,0:25:60.15:0,60,1026	0/0:12,0:12:27.08:0,27,548	0/0:6,0:6:18.06:0,18,407	0/0:17,0:17:45.10:0,45,846	0/0:23,0:23:51.09:0,51,921	0/0:25,0:25:69.16:0,69,1340	0/0:23,0:23:60.03:0,60,1247	0/0:24,0:24:60.12:0,60,1096	1/1:8,0:8:6.02:160,6,0	0/1:24,0:24:99:305,0,191	0/1:13,0:13:3.95:267,0,4	0/1:18,0:17:0:0,0,0	0/0:19,0:19:56.73:0,57,1067	0/0:20,0:20:44.12:0,44,732	0/0:31,0:31:81.24:0,81,1699	0/0:16,0:16:41.78:0,42,773	0/1:20,0:20:56.83:681,0,57	0/1:25,0:25:68.87:372,0,69	0/1:4,0:4:22.96:118,0,23
chr10	83236783	.	C	CTCTCTG	4731.92	PASS	AB=0.588;AC=19;AF=0.339;AN=56;BaseQRankSum=1.027;DP=565;FS=8.565;HRun=0;HaplotypeScore=136.8335;InbreedingCoeff=0.9216;MQ=69.45;MQ0=9;MQRankSum=-6.312;QD=22.97;ReadPosRankSum=-4.794;VQSLOD=2.6491;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:8,25:34:15.03:223,15,0	0/0:9,0:9:15.04:0,15,268	0/0:16,0:12:27.09:0,27,547	0/0:39,0:29:8.42:0,8,1001	0/0:11,0:11:18.06:0,18,390	0/0:16,0:15:27.09:0,27,552	1/1:24,0:24:27.05:406,27,0	1/1:19,0:19:33.07:720,33,0	0/0:19,0:19:51.17:0,51,985	0/0:24,0:24:42.10:0,42,795	0/0:14,0:14:24.07:0,24,459	0/0:7,0:7:18.06:0,18,389	0/0:18,0:18:36.12:0,36,744	0/0:24,0:23:36.12:0,36,729	0/0:28,0:27:57.19:0,57,1129	0/0:22,0:22:57.03:0,57,1110	0/0:24,0:24:45.11:0,45,879	1/1:3,7:11:6.02:199,6,0	1/1:29,0:29:39.08:871,39,0	1/1:15,0:15:21.06:447,21,0	0/1:6,13:19:0:0,0,0	0/0:20,0:20:54.10:0,54,1009	0/0:19,0:19:33.08:0,33,543	0/0:33,0:33:75.26:0,75,1583	0/0:16,0:16:33.09:0,33,635	1/1:19,1:20:36.08:970,36,0	1/1:28,0:29:33.10:757,33,0	1/1:5,0:5:6.02:138,6,0
chr10	83236796	.	TCA	T	1974.60	PASS	AB=0.809;AC=35;AF=0.700;AN=50;BaseQRankSum=1.607;DP=536;FS=3.723;HRun=0;HaplotypeScore=96.3816;InbreedingCoeff=0.2639;MQ=59.88;MQ0=11;MQRankSum=1.741;QD=5.22;ReadPosRankSum=-1.193;VQSLOD=2.8245;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:27,4:31:12.03:128,12,0	1/1:4,4:8:2.64:32,3,0	./.	./.	1/1:8,4:12:6.01:65,6,0	1/1:10,5:14:6.01:65,6,0	1/1:15,0:21:10.81:51,11,0	./.	1/1:11,9:20:26.90:273,27,0	1/1:14,5:18:11.99:117,12,0	1/1:9,5:15:9.02:97,9,0	0/0:11,0:11:7.27:0,7,215	0/1:12,3:16:25.52:38,0,26	1/1:12,7:18:12.03:130,12,0	0/1:11,13:25:14.68:225,0,15	0/1:16,8:25:20.53:185,0,21	1/1:13,5:19:17.88:176,18,0	0/0:15,0:15:0.12:0,0,97	0/1:20,1:21:25.51:26,0,40	1/1:13,4:18:9.89:109,10,0	0/0:24,0:22:5.97:0,6,46	1/1:16,6:22:12.02:126,12,0	0/0:14,0:17:12.01:0,12,116	0/0:29,3:32:3.71:0,4,453	1/1:14,2:16:6.01:65,6,0	1/1:23,0:23:6.62:94,7,0	0/1:22,2:24:5.78:67,0,6	1/1:7,1:8:5.13:63,5,0
chr10	83236797	.	C	CTCTG	2903.33	PASS	AB=0.920;AC=14;AF=0.250;AN=56;BaseQRankSum=7.245;DP=522;FS=7.162;HRun=0;HaplotypeScore=111.3696;InbreedingCoeff=0.5573;MQ=60.39;MQ0=11;MQRankSum=-4.158;QD=17.81;ReadPosRankSum=-2.718;VQSLOD=2.2738;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:11.97:119,12,0	0/0:8,0:8:17.99:0,18,262	0/0:13,0:9:27.09:0,27,509	0/0:32,0:22:22.61:0,23,891	0/0:12,0:12:4.10:0,4,352	0/0:15,0:14:27.09:0,27,510	1/1:21,0:21:23.67:328,24,0	0/1:12,0:12:13.33:352,0,13	0/0:20,0:20:49.82:0,50,844	0/0:19,0:18:42.67:0,43,774	0/0:16,0:16:18.84:0,19,406	0/0:12,0:12:22.12:0,22,468	0/0:16,0:16:38.69:0,39,693	0/0:19,0:18:36.12:0,36,641	0/0:26,0:25:59.55:0,60,984	0/0:24,0:24:56.89:0,57,972	0/0:19,0:19:39.92:0,40,770	0/1:15,0:15:99:100,0,99	0/1:9,5:17:99:377,0,140	1/1:17,1:18:15.56:401,16,0	0/0:20,0:19:1.82:0,2,6	0/0:22,0:22:54:0,54,944	0/0:18,0:18:33.08:0,33,507	0/0:32,0:32:81.28:0,81,1613	0/0:16,0:16:23.48:0,23,593	1/1:6,13:21:10.01:828,10,0	1/1:18,5:23:17.03:504,17,0	0/1:7,0:7:23.98:74,0,24
chr10	83236799	.	C	CTG	1364.04	PASS	AB=0.935;AC=11;AF=0.196;AN=56;BaseQRankSum=9.057;DP=524;FS=2.602;HRun=0;HaplotypeScore=103.5462;InbreedingCoeff=0.1774;MQ=59.24;MQ0=11;MQRankSum=-3.663;QD=8.53;ReadPosRankSum=-0.232;VQSLOD=3.0986;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:11.81:87,12,0	0/0:8,0:8:17.99:0,18,207	0/0:13,0:9:27.09:0,27,407	0/0:31,0:21:12.60:0,13,622	0/0:13,0:13:24.06:0,24,323	0/0:16,0:15:27.07:0,27,371	1/1:20,0:20:20.75:212,21,0	0/1:12,0:12:99:197,0,115	0/0:20,0:20:37.05:0,37,561	0/0:19,0:18:48.12:0,48,625	0/0:16,0:16:24.05:0,24,299	0/0:14,0:14:26.97:0,27,407	0/0:16,0:16:37.23:0,37,512	0/0:20,0:19:36.08:0,36,458	0/0:27,0:26:56.93:0,57,683	0/0:24,0:24:53.74:0,54,678	0/0:20,0:20:45.08:0,45,560	0/1:15,0:15:27.27:27,0,195	0/1:14,0:14:99:152,0,280	0/1:15,3:18:38.68:208,0,39	0/0:22,0:20:4.83:0,5,46	0/0:21,0:21:51.13:0,51,684	0/0:17,0:17:26.93:0,27,286	0/0:32,0:32:81.25:0,81,1225	0/0:15,0:15:33.08:0,33,464	0/1:23,0:23:99:398,0,109	0/1:12,9:22:56.26:208,0,56	0/1:7,0:7:32.74:33,0,87
chr10	83237578	.	G	GAGGA	3600.39	PASS	AB=0.914;AC=22;AF=0.440;AN=50;BaseQRankSum=0.372;DP=581;FS=7.522;HRun=0;HaplotypeScore=103.8337;InbreedingCoeff=0.6411;MQ=71.93;MQ0=9;MQRankSum=-0.995;QD=13.69;ReadPosRankSum=-3.390;VQSLOD=1.2804;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,19:39:21.61:883,0,22	0/0:7,0:7:2.40:0,2,45	./.	./.	0/0:17,0:17:21.05:0,21,298	0/0:19,0:19:18.04:0,18,234	1/1:17,0:15:18.02:219,18,0	0/1:25,0:24:0:0,0,0	1/1:7,10:17:18.06:419,18,0	0/0:25,0:25:30.09:0,30,437	0/0:20,0:20:33.10:0,33,474	0/0:12,0:13:17.86:0,18,257	0/0:16,0:16:33.07:0,33,440	0/0:19,0:19:21.06:0,21,301	0/0:31,0:31:39.12:0,39,573	0/1:20,0:20:30.14:30,0,472	0/0:34,0:34:39.11:0,39,678	1/1:19,0:19:17.94:217,18,0	1/1:15,0:14:12.04:200,12,0	1/1:9,3:13:6.02:138,6,0	1/1:25,0:25:17.81:196,18,0	0/0:16,0:17:24.01:0,24,340	./.	1/1:11,12:23:27.09:629,27,0	0/0:17,0:16:30.07:0,30,414	0/1:23,0:23:23.77:204,0,24	1/1:7,9:16:19.31:412,19,0	1/1:7,0:9:3.01:52,3,0
chr10	83240221	.	CT	C	1096.37	PASS	AB=0.878;AC=17;AF=0.304;AN=56;BaseQRankSum=5.780;DP=316;FS=27.874;HRun=3;HaplotypeScore=39.9304;InbreedingCoeff=0.6600;MQ=71.86;MQ0=4;MQRankSum=-0.749;QD=12.60;ReadPosRankSum=-2.095;VQSLOD=0.3120;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,1:15:31.75:245,32,0	0/0:4,0:4:5.57:0,6,69	0/0:27,0:15:32.41:0,32,324	0/0:20,0:10:12.23:0,12,116	0/0:14,0:14:7.99:0,8,219	0/0:11,1:12:5.06:0,5,184	1/1:14,4:17:45.48:358,45,0	1/1:12,0:11:26.91:211,27,0	0/0:14,2:16:25.16:0,25,318	0/0:11,0:11:26.96:0,27,234	0/0:12,0:12:29.21:0,29,286	0/0:12,0:12:26.93:0,27,220	0/1:4,1:4:12.95:13,0,72	0/0:10,0:10:19.67:0,20,145	0/0:12,3:15:8.38:0,8,173	0/0:6,0:6:11.96:0,12,108	0/0:20,2:22:4.03:0,4,455	0/0:11,0:11:30.75:0,31,287	1/1:6,0:6:10.20:70,10,0	1/1:5,0:5:9.86:75,10,0	1/1:11,1:12:29.68:224,30,0	0/1:3,1:4:20.66:21,0,23	0/0:8,0:8:18:0,18,167	0/0:13,0:12:32.75:0,33,279	0/1:4,0:4:2.97:3,0,45	0/0:11,0:11:29.05:0,29,259	1/1:5,1:6:9.82:67,10,0	0/0:5,0:5:11.99:0,12,101
chr10	83240311	.	C	CT	682.61	PASS	AB=0.857;AC=16;AF=0.286;AN=56;BaseQRankSum=2.984;DP=370;FS=0.604;HRun=14;HaplotypeScore=48.8456;InbreedingCoeff=0.6716;MQ=63.74;MQ0=14;MQRankSum=-2.542;QD=6.04;ReadPosRankSum=-5.009;VQSLOD=0.4701;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:4.85:64,0,5	0/0:7,0:7:13.83:0,14,83	0/0:29,0:8:3.79:0,4,24	0/0:26,0:6:8.56:0,9,49	0/0:20,0:20:31.30:0,31,198	0/0:14,1:15:12.07:0,12,204	1/1:12,0:12:3.12:48,3,0	0/1:6,4:5:6.62:60,0,7	0/0:5,0:5:8.36:0,8,57	0/0:17,0:18:34.42:0,34,217	0/0:14,0:14:31.32:0,31,195	0/0:7,0:7:20.69:0,21,134	0/0:6,0:7:13.64:0,14,82	0/0:10,0:10:20.63:0,21,133	0/0:10,0:10:20.63:0,21,132	0/0:9,0:10:19.70:0,20,121	0/0:23,0:25:31.60:0,32,291	0/0:18,0:18:38.28:0,38,249	1/1:8,2:8:8.06:84,8,0	1/1:6,7:13:11.95:98,12,0	1/1:3,3:5:3:26,3,0	0/0:4,0:4:2.33:0,2,17	0/0:8,0:8:11.76:0,12,77	0/0:12,0:12:23.63:0,24,154	0/0:10,0:11:13.77:0,14,81	1/1:3,12:14:26.93:225,27,0	1/1:9,6:14:23.10:208,23,0	1/1:8,0:6:5.98:46,6,0
chr10	83240314	.	T	TC	436.87	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=5.158;DP=369;FS=3.719;HRun=0;HaplotypeScore=47.0560;InbreedingCoeff=0.6467;MQ=63.86;MQ0=13;MQRankSum=-1.086;QD=9.93;ReadPosRankSum=0.937;VQSLOD=3.1688;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:35.12:356,35,0	0/0:9,0:9:23.98:0,24,257	0/0:29,0:9:14.03:0,14,107	0/0:25,0:6:14.74:0,15,123	0/0:22,0:22:54.04:0,54,612	0/0:16,0:16:45.58:0,46,570	1/1:0,11:11:18.52:199,19,0	0/1:10,0:5:2.34:2,0,36	0/0:7,0:7:19.27:0,19,203	0/0:19,0:19:48.03:0,48,572	0/0:16,0:15:42.08:0,42,518	0/0:7,0:7:21.07:0,21,289	0/0:6,0:6:15.02:0,15,186	0/0:11,0:11:30.07:0,30,366	0/0:12,0:12:30.05:0,30,361	0/0:9,0:9:27.06:0,27,328	0/0:23,0:23:58.55:0,59,739	0/0:18,0:18:50.97:0,51,627	0/0:8,0:7:17.38:0,17,123	0/0:12,0:12:19.86:0,20,161	0/0:6,0:5:6.47:0,6,54	0/0:3,0:3:8.94:0,9,81	0/0:8,0:8:23.88:0,24,256	0/0:10,0:10:27.08:0,27,356	0/0:10,0:10:24.03:0,24,256	0/0:16,0:15:0.45:0,0,71	0/0:16,0:15:7.84:0,8,102	0/0:7,0:5:8.80:0,9,60
chr10	83241058	.	TA	T	821.60	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=6.664;DP=615;FS=11.956;HRun=10;HaplotypeScore=64.8499;InbreedingCoeff=0.6740;MQ=76.98;MQ0=0;MQRankSum=-1.597;QD=16.11;ReadPosRankSum=-0.171;VQSLOD=3.0029;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:32:63.23:0,63,328	0/1:7,0:7:7.99:8,0,88	0/0:15,1:16:10.89:0,11,276	0/0:12,1:13:0.97:0,1,215	0/0:27,0:27:69.14:0,69,742	0/0:18,0:18:51.14:0,51,564	0/0:8,0:19:25.96:0,26,140	0/0:34,1:35:93.24:0,93,1020	0/0:20,0:20:48.13:0,48,531	0/0:31,0:31:52.72:0,53,804	0/0:20,0:20:25.28:0,25,492	0/0:23,0:23:63.17:0,63,697	0/0:21,0:21:57.15:0,57,630	0/0:18,1:19:19.07:0,19,438	0/0:41,0:41:99:0,108,1166	0/0:29,0:29:78.21:0,78,863	0/0:15,1:16:19.13:0,19,439	0/0:20,2:22:5.04:0,5,512	0/0:11,0:11:27.02:0,27,277	0/0:44,0:44:99:0,120,1311	0/0:11,0:11:33.09:0,33,365	0/0:17,0:17:48.12:0,48,524	0/0:29,0:29:78.19:0,78,852	0/0:11,0:11:27.03:0,27,285	0/0:20,0:20:26.01:0,26,507	1/1:4,23:27:62.97:547,63,0	0/0:19,0:19:48.13:0,48,531	1/1:2,15:17:45.85:393,46,0
chr10	83241638	.	GACGACGACGACGACA	G	4594.92	PASS	AB=0.931;AC=12;AF=0.214;AN=56;BaseQRankSum=14.703;DP=747;FS=8.766;HRun=0;HaplotypeScore=295.7255;InbreedingCoeff=0.4584;MQ=63.17;MQ0=1;MQRankSum=-6.475;QD=17.47;ReadPosRankSum=1.095;VQSLOD=1.8101;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:44:0.13:460,0,0	0/0:5,0:5:15.05:0,15,942	0/0:41,0:29:77.43:0,77,3319	0/0:29,0:25:61.08:0,61,2302	0/0:22,0:22:60.21:0,60,2961	0/0:30,0:30:81.26:0,81,4222	1/1:28,0:28:13.11:417,13,0	0/1:35,0:35:93.70:305,0,94	0/0:29,0:29:81.28:0,81,4884	0/0:23,0:23:55.43:0,55,2883	0/0:22,0:22:57.15:0,57,2808	0/0:22,0:22:63.22:0,63,3906	0/0:26,0:26:75.24:0,75,3664	0/0:26,0:26:72.25:0,72,4305	0/0:40,0:40:99:0,120,7192	0/0:25,0:25:63.22:0,63,3816	0/0:33,0:33:96.29:0,96,5787	0/0:29,0:29:39.04:0,39,370	0/1:29,0:29:51.63:505,0,52	0/1:24,0:24:37.40:320,0,37	0/1:35,0:35:3.97:78,0,4	0/0:18,0:18:45.15:0,45,2364	0/0:16,0:16:42.14:0,42,2284	0/0:31,0:31:87.30:0,87,6019	0/0:16,0:16:45.15:0,45,2753	0/1:7,17:24:99:998,0,157	1/1:34,0:33:57.08:853,57,0	1/1:0,10:10:15.05:659,15,0
chr10	83241641	.	GACGACGACGACA	G	9132.10	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=16.190;DP=732;FS=11.419;HRun=0;HaplotypeScore=235.7079;InbreedingCoeff=0.8215;MQ=65.69;MQ0=1;MQRankSum=-5.801;QD=33.21;ReadPosRankSum=0.205;VQSLOD=2.9307;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,33:40:42.10:1322,42,0	0/0:5,0:5:15.05:0,15,804	0/0:45,0:33:90.09:0,90,2822	0/0:30,0:25:54.88:0,55,1920	0/0:22,0:22:60.19:0,60,2529	0/0:28,0:28:72.25:0,72,3277	1/1:4,23:27:30.10:1053,30,0	1/1:10,27:37:78.64:1088,79,0	0/0:29,0:29:81.27:0,81,4095	0/0:26,0:26:66.46:0,66,2518	0/0:23,0:23:57.07:0,57,2284	0/0:22,0:22:66.22:0,66,3277	0/0:26,0:26:69.22:0,69,2861	0/0:26,0:26:66.23:0,66,3668	0/0:42,0:42:99:0,126,5912	0/0:23,0:23:60.21:0,60,3064	0/0:32,0:32:90.28:0,90,4657	0/1:29,0:29:67.51:171,0,68	1/1:4,21:25:65.88:1285,66,0	1/1:6,18:24:35.91:959,36,0	1/1:8,21:29:9.03:273,9,0	0/0:18,0:18:45.12:0,45,1906	0/0:16,0:16:45.14:0,45,1861	0/0:29,0:29:87.30:0,87,4974	0/0:15,0:15:45.15:0,45,2262	0/1:21,0:21:99:582,0,129	1/1:2,31:32:57.09:1959,57,0	1/1:10,0:10:15.05:440,15,0
chr10	83241644	.	GACGACGACA	G	6055.37	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=16.249;DP=715;FS=4.470;HRun=0;HaplotypeScore=203.5873;InbreedingCoeff=0.9059;MQ=67.30;MQ0=1;MQRankSum=-6.141;QD=23.38;ReadPosRankSum=-0.165;VQSLOD=4.1095;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:39:39.11:741,39,0	0/0:5,0:5:15.05:0,15,635	0/0:43,0:33:83.98:0,84,2178	0/0:31,0:26:61.14:0,61,1493	0/0:24,0:24:60.15:0,60,1987	0/0:29,0:29:72.18:0,72,2481	1/1:27,0:27:30.10:622,30,0	1/1:32,0:32:74.66:684,75,0	0/0:29,0:29:84.25:0,84,3238	0/0:26,0:26:69.01:0,69,1983	0/0:21,0:21:54.07:0,54,1770	0/0:22,0:22:63.19:0,63,2552	0/0:26,0:26:60.16:0,60,2129	0/0:25,0:25:66.21:0,66,2962	0/0:42,0:42:99:0,117,4449	0/0:22,0:22:60.12:0,60,2332	0/0:32,0:32:90.21:0,90,3651	1/1:8,21:29:24.04:649,24,0	1/1:23,0:23:57.72:763,58,0	1/1:23,0:23:28.99:502,29,0	1/1:25,0:25:9.03:144,9,0	0/0:17,0:17:45.13:0,45,1472	0/0:17,0:17:48.13:0,48,1509	0/0:29,0:29:87.29:0,87,3871	0/0:16,0:16:45.14:0,45,1771	0/1:18,0:18:94.90:430,0,95	1/1:32,1:32:57.09:1187,57,0	1/1:10,0:10:15.05:335,15,0
chr10	83242319	.	CTT	C	2881.51	PASS	AB=0.526;AC=11;AF=0.196;AN=56;BaseQRankSum=5.499;DP=577;FS=0.404;HRun=11;HaplotypeScore=78.6001;InbreedingCoeff=0.8765;MQ=69.75;MQ0=0;MQRankSum=-1.470;QD=18.83;ReadPosRankSum=1.051;VQSLOD=2.8631;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:3,2:30:10.43:10,0,109	0/0:7,0:7:21.07:0,21,323	0/0:24,0:18:35.60:0,36,470	0/0:14,0:9:18.78:0,19,232	0/0:30,0:30:78.22:0,78,1173	0/0:21,0:23:58.81:0,59,840	0/0:4,0:18:32.44:0,32,111	1/1:9,23:32:69.12:734,69,0	0/0:21,0:21:59.56:0,60,885	0/0:28,0:28:75.24:0,75,1121	0/0:16,0:18:47.61:0,48,675	0/0:17,0:17:48.15:0,48,719	0/0:23,0:23:57.19:0,57,864	0/0:21,0:21:54.15:0,54,805	0/0:26,0:26:69.21:0,69,1028	0/0:13,0:13:39:0,39,567	0/0:18,0:18:42.13:0,42,624	0/0:13,0:13:36.12:0,36,548	1/1:8,16:24:48.04:501,48,0	1/1:4,32:38:99:1045,102,0	1/1:0,3:3:9.02:96,9,0	0/0:29,0:29:62.19:0,62,1110	0/0:20,0:21:62.88:0,63,914	0/0:15,0:15:37.85:0,38,512	0/0:18,0:20:56.68:0,57,838	0/0:2,0:17:51.09:0,51,512	1/1:3,23:26:63.15:671,63,0	0/0:0,0:7:15.02:0,15,144
chr10	83242703	.	C	CA	3907.04	PASS	AB=0.955;AC=21;AF=0.375;AN=56;BaseQRankSum=9.507;DP=668;FS=3.716;HRun=8;HaplotypeScore=82.1545;InbreedingCoeff=0.9370;MQ=70.11;MQ0=6;MQRankSum=1.274;QD=14.63;ReadPosRankSum=-0.343;VQSLOD=3.7058;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,23:30:66.19:752,66,0	0/0:12,0:12:27.01:0,27,247	0/0:18,0:13:26.35:0,26,233	0/1:20,1:18:6.52:7,0,105	0/0:30,0:30:74.89:0,75,669	0/0:26,0:26:72.03:0,72,655	1/1:3,21:24:32.73:630,33,0	1/1:34,0:32:72.02:298,72,0	0/0:23,0:23:59.19:0,59,513	0/0:34,0:33:89.38:0,89,797	0/0:23,0:23:57.02:0,57,518	0/0:21,0:21:63.02:0,63,572	0/0:20,0:20:54.02:0,54,494	0/0:20,0:20:50.24:0,50,447	0/0:25,0:25:66:0,66,593	0/0:27,0:27:68.99:0,69,618	0/0:32,0:32:84:0,84,762	1/1:3,1:24:56.51:302,57,0	1/1:21,0:18:29.04:129,29,0	1/1:30,0:30:64.52:280,65,0	1/1:28,0:28:53.38:228,53,0	0/0:24,0:24:60.02:0,60,545	0/0:29,0:29:78.04:0,78,713	0/0:21,0:21:53.94:0,54,471	0/0:16,0:16:36:0,36,326	1/1:1,23:24:41.70:710,42,0	1/1:19,0:19:37.50:155,37,0	1/1:0,12:12:36.11:415,36,0
chr10	83242705	.	A	AAC	6062.70	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-10.351;DP=668;FS=0.000;HRun=0;HaplotypeScore=87.3967;InbreedingCoeff=0.9959;MQ=70.71;MQ0=6;MQRankSum=-0.129;QD=37.66;ReadPosRankSum=-0.865;VQSLOD=6.6035;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:51.48:0,51,179	0/0:13,0:13:27.09:0,27,412	0/0:18,0:13:15.42:0,15,475	0/0:20,0:17:22.24:0,22,357	0/0:29,0:29:87.25:0,87,1247	0/0:25,0:25:75.25:0,75,1125	0/0:24,0:24:51.20:0,51,238	1/1:3,35:37:99:1619,102,0	0/0:23,0:23:66.07:0,66,937	0/0:35,0:34:96.31:0,96,1420	0/0:21,0:21:60.20:0,60,898	0/0:22,0:22:66.21:0,66,988	0/0:19,0:19:57.19:0,57,851	0/0:18,0:18:54.17:0,54,787	0/0:25,0:25:75.22:0,75,1082	0/0:27,0:27:78.21:0,78,1118	0/0:32,0:32:93.27:0,93,1350	1/1:23,0:23:32.92:364,33,0	1/1:2,19:18:45.15:768,45,0	1/1:2,28:31:81.22:1389,81,0	1/1:0,28:28:66.23:1168,66,0	0/0:24,0:24:66.21:0,66,969	0/0:29,0:29:78.26:0,78,1185	0/0:21,0:21:63.18:0,63,898	0/0:16,0:16:45.13:0,45,633	0/0:26,0:26:59.40:0,59,271	1/1:0,19:19:42.14:754,42,0	0/0:12,0:12:26.64:0,27,87
chr10	83243271	.	AAC	A	246.33	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.361;DP=622;FS=0.000;HRun=0;HaplotypeScore=80.2743;InbreedingCoeff=0.9084;MQ=72.18;MQ0=1;MQRankSum=-1.655;QD=17.59;ReadPosRankSum=0.373;VQSLOD=3.0945;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1676	0/0:5,0:5:15.03:0,15,223	0/0:31,0:31:61.09:0,61,875	0/0:24,0:20:26.31:0,26,469	0/0:41,0:41:99:0,123,1932	0/0:8,0:8:24.01:0,24,353	0/0:23,0:23:63.18:0,63,946	0/0:32,0:31:93.05:0,93,1289	0/0:13,0:13:39.13:0,39,647	0/0:32,0:32:93.28:0,93,1478	0/0:18,0:18:54.15:0,54,827	0/0:15,0:15:45.13:0,45,697	0/0:17,0:17:51.13:0,51,751	0/0:12,0:12:33.05:0,33,453	0/0:20,0:20:57.11:0,57,836	0/0:25,0:25:75.15:0,75,1060	0/0:34,0:34:99:0,99,1458	1/1:1,13:14:9.27:330,9,0	0/0:18,0:17:51.10:0,51,743	0/0:24,0:24:68.81:0,69,971	0/0:33,0:33:99:0,99,1476	0/0:23,0:23:69.17:0,69,1064	0/0:17,0:17:51.17:0,51,813	0/0:24,0:24:63.66:0,64,996	0/0:23,0:23:69.20:0,69,1020	0/0:24,0:24:69.14:0,69,1059	0/0:31,0:31:93.21:0,93,1421	0/0:5,0:5:15.05:0,15,249
chr10	83243381	.	A	AC	332.86	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=3.633;DP=524;FS=4.414;HRun=0;HaplotypeScore=103.9546;InbreedingCoeff=0.8124;MQ=46.39;MQ0=17;MQRankSum=-0.164;QD=10.40;ReadPosRankSum=3.559;VQSLOD=4.1278;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:22:42.61:0,43,348	0/0:15,0:15:37.99:0,38,425	0/0:4,0:1:0:0,0,0	0/1:10,0:2:0:0,0,0	0/0:18,0:17:42.28:0,42,394	0/0:16,0:15:33:0,33,336	0/0:18,0:14:26.92:0,27,265	0/0:34,0:34:93.41:0,93,676	0/0:12,0:12:33.92:0,34,341	0/0:25,0:25:75.07:0,75,775	0/0:20,0:18:47.96:0,48,445	0/0:13,0:12:34.46:0,34,312	0/0:11,0:11:32.24:0,32,311	0/0:14,0:14:36.64:0,37,321	0/0:21,0:21:53.16:0,53,488	0/0:20,0:19:46.92:0,47,440	0/0:21,0:19:49.40:0,49,447	1/1:6,16:21:48.88:427,49,0	0/0:29,0:28:79.51:0,80,570	0/0:21,0:20:59.08:0,59,444	0/0:11,0:10:29.96:0,30,253	0/0:26,0:26:64.09:0,64,656	0/0:20,0:19:47.92:0,48,438	0/0:21,0:20:40.51:0,41,359	0/0:14,0:14:31.55:0,32,362	0/0:25,0:25:56.13:0,56,481	0/0:24,0:20:50.01:0,50,336	0/0:12,0:9:26.96:0,27,231
chr10	83243384	.	A	AC	276.79	PASS	AB=0.955;AC=5;AF=0.089;AN=56;BaseQRankSum=8.067;DP=524;FS=4.351;HRun=0;HaplotypeScore=109.0338;InbreedingCoeff=0.2811;MQ=45.84;MQ0=17;MQRankSum=-3.396;QD=2.41;ReadPosRankSum=1.422;VQSLOD=2.8876;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:24:44.03:0,44,354	0/0:13,0:13:32.25:0,32,390	0/0:5,0:2:3.01:0,3,31	0/0:13,0:3:1.81:0,2,5	0/0:20,0:19:43.07:0,43,389	0/0:16,0:15:33:0,33,336	0/0:18,0:14:29.88:0,30,296	0/1:35,0:35:99:125,0,128	0/0:11,0:11:30.91:0,31,318	0/0:24,0:24:72.06:0,72,750	0/0:19,0:17:44.97:0,45,420	0/0:12,0:11:29.76:0,30,274	0/0:9,0:9:26.21:0,26,258	0/0:14,0:14:39.64:0,40,347	0/0:22,0:22:56:0,56,523	0/0:20,0:19:50.82:0,51,471	0/0:20,0:18:45.14:0,45,394	1/1:6,16:21:40.05:185,40,0	0/1:27,5:31:69.81:70,0,71	0/0:20,0:19:10.34:0,10,78	0/0:10,0:9:1.02:0,1,48	0/0:23,0:23:58.28:0,58,620	0/0:18,0:17:44.68:0,45,406	0/0:21,0:20:38.67:0,39,343	0/0:14,0:14:31.48:0,31,354	0/0:25,0:25:70.52:0,71,557	0/1:26,0:22:15.63:18,0,16	0/0:13,0:10:26.95:0,27,228
chr10	83243385	.	A	AC	1595.57	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.380;DP=521;FS=2.412;HRun=0;HaplotypeScore=100.8938;InbreedingCoeff=0.9288;MQ=47.20;MQ0=17;MQRankSum=-0.935;QD=11.00;ReadPosRankSum=4.521;VQSLOD=4.1217;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:24:45.76:0,46,357	0/0:13,0:13:32.24:0,32,389	0/0:6,0:3:2.94:0,3,32	0/0:14,0:4:1.81:0,2,5	0/0:21,0:20:49.39:0,49,440	0/0:16,0:15:33:0,33,334	0/0:18,0:14:29.93:0,30,298	1/1:25,9:34:40.15:314,40,0	0/0:9,0:9:24.94:0,25,271	0/0:25,0:25:71.95:0,72,735	0/0:19,0:17:44.95:0,45,412	0/0:11,0:10:28.47:0,28,268	0/0:8,0:8:23.23:0,23,233	0/0:13,0:13:36.61:0,37,320	0/0:22,0:22:55.97:0,56,519	0/0:19,0:18:47.80:0,48,441	0/0:20,0:18:45.78:0,46,413	1/1:22,0:21:56.74:350,57,0	1/1:19,14:32:19.46:358,19,0	1/1:6,14:19:50.25:328,50,0	1/1:6,4:9:18.98:158,19,0	0/0:23,0:23:58.26:0,58,617	0/0:17,0:16:41.71:0,42,385	0/0:21,0:20:41.87:0,42,366	0/0:15,0:15:31.54:0,32,360	0/0:25,0:25:67.44:0,67,516	1/1:11,15:22:24.62:271,25,0	0/0:13,0:10:26.94:0,27,225
chr10	83243388	.	A	AC	1671.41	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.613;DP=516;FS=0.000;HRun=0;HaplotypeScore=98.3815;InbreedingCoeff=0.9243;MQ=46.82;MQ0=18;MQRankSum=-0.592;QD=11.77;ReadPosRankSum=3.759;VQSLOD=4.3120;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:25:41.92:0,42,347	0/0:13,0:13:32.76:0,33,383	0/0:9,0:4:3.95:0,4,35	0/0:15,0:4:0.37:0,0,7	0/0:20,0:19:46.72:0,47,437	0/0:16,0:15:32.97:0,33,326	0/0:17,0:13:29.90:0,30,293	1/1:26,9:35:63.41:433,63,0	0/0:9,0:9:26.08:0,26,268	0/0:25,0:25:75.02:0,75,757	0/0:18,0:16:41.93:0,42,376	0/0:11,0:10:28.33:0,28,258	0/0:7,0:7:19.56:0,20,201	0/0:11,0:11:30.65:0,31,272	0/0:22,0:22:52.79:0,53,490	0/0:19,0:18:47.62:0,48,425	0/0:19,0:17:42.88:0,43,394	1/1:20,0:19:49.42:312,49,0	1/1:18,14:31:75.01:449,75,0	1/1:6,14:19:34.93:272,35,0	1/1:5,4:8:18.97:100,19,0	0/0:23,0:23:58.27:0,58,617	0/0:18,0:17:44.68:0,45,400	0/0:20,0:19:38.65:0,39,334	0/0:16,0:16:37.54:0,38,412	0/0:25,0:25:67.43:0,67,506	1/1:11,15:22:48.47:290,48,0	0/0:12,0:9:26.91:0,27,214
chr10	83243777	.	CT	C	1150.01	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.675;DP=278;FS=2.067;HRun=10;HaplotypeScore=36.0819;InbreedingCoeff=0.8162;MQ=68.18;MQ0=2;MQRankSum=-1.976;QD=15.13;ReadPosRankSum=-1.743;VQSLOD=2.8231;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:21.06:0,21,232	0/0:2,0:2:6.02:0,6,66	0/0:2,0:2:3.01:0,3,31	0/0:12,0:10:7.04:0,7,118	0/0:12,1:12:30.49:0,30,318	0/0:19,0:19:57.15:0,57,630	0/0:4,0:4:0:0,0,0	1/1:9,24:32:71.95:625,72,0	0/0:5,0:5:12.03:0,12,133	0/0:7,0:7:15.03:0,15,159	0/0:11,0:11:27.07:0,27,299	0/0:5,0:5:12.03:0,12,133	0/0:5,0:5:9.01:0,9,91	0/0:6,0:6:15.04:0,15,162	0/0:10,0:10:27.07:0,27,299	0/0:6,0:6:15.04:0,15,166	0/0:34,1:35:67.18:0,67,957	1/1:3,4:7:14.92:121,15,0	1/1:8,11:18:22.87:290,23,0	1/1:1,5:6:14.99:130,15,0	1/1:1,1:2:3:26,3,0	0/0:4,0:4:12.03:0,12,133	0/0:6,0:6:15.04:0,15,166	0/0:8,0:8:21.06:0,21,232	0/0:10,0:10:30.07:0,30,323	0/0:10,0:10:24.06:0,24,265	1/1:3,6:9:14.99:130,15,0	0/0:12,0:10:24.06:0,24,266
chr10	83243812	.	TATGA	T	2977.21	PASS	AB=1.000;AC=19;AF=0.365;AN=52;BaseQRankSum=7.723;DP=266;FS=5.017;HRun=0;HaplotypeScore=51.7599;InbreedingCoeff=0.7649;MQ=41.27;MQ0=17;MQRankSum=-6.934;QD=32.72;ReadPosRankSum=-0.046;VQSLOD=2.9199;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:9:21.07:392,21,0	0/0:3,0:3:9.03:0,9,240	./.	0/1:7,0:2:1.73:2,0,2	0/0:12,0:12:27.08:0,27,660	0/0:13,0:13:30.02:0,30,637	1/1:0,3:3:3.01:56,3,0	1/1:6,14:19:39.13:727,39,0	0/0:11,0:11:11.96:0,12,318	0/0:16,0:16:42.14:0,42,1002	0/0:9,0:9:18.06:0,18,476	0/0:6,0:6:2.81:0,3,79	0/0:7,0:7:9.03:0,9,238	0/0:9,0:9:27.09:0,27,718	0/0:11,0:10:18.03:0,18,376	0/0:11,0:11:27.09:0,27,708	0/0:32,0:28:66.16:0,66,1640	1/1:0,2:2:3.01:56,3,0	1/1:4,8:11:27.08:422,27,0	1/1:0,5:5:15.05:279,15,0	./.	0/0:6,0:6:3.01:0,3,79	0/0:6,0:6:3.01:0,3,80	0/0:4,0:4:2.98:0,3,21	0/0:9,0:9:18.04:0,18,480	1/1:2,9:11:21.07:391,21,0	1/1:0,14:14:33.11:614,33,0	1/1:1,6:5:12.04:224,12,0
chr10	83244514	.	CT	C	1383.65	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=4.942;DP=382;FS=19.914;HRun=10;HaplotypeScore=37.0737;InbreedingCoeff=0.8302;MQ=62.02;MQ0=19;MQRankSum=0.318;QD=12.14;ReadPosRankSum=-0.390;VQSLOD=1.0293;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:66.09:0,66,687	0/0:6,0:6:15.04:0,15,166	1/1:12,0:5:2.01:6,2,0	0/0:6,0:3:3.01:0,3,30	0/0:10,0:10:27.06:0,27,291	0/0:23,0:22:56.37:0,56,604	0/0:9,0:9:24.06:0,24,265	1/1:9,34:40:98.90:843,99,0	0/0:10,0:9:24.04:0,24,254	0/0:15,0:14:30.08:0,30,332	0/0:8,0:9:21.02:0,21,217	0/0:6,0:6:18.04:0,18,192	0/0:13,0:13:33.09:0,33,364	0/0:11,0:10:24.05:0,24,257	0/0:7,0:8:20.89:0,21,213	0/1:12,0:10:1.57:2,0,208	0/0:28,1:28:34.11:0,34,604	0/0:14,0:14:36.10:0,36,398	1/1:5,13:16:29.98:260,30,0	1/1:4,6:9:17.99:156,18,0	1/1:2,2:2:6:52,6,0	0/0:10,0:10:24.06:0,24,265	0/0:12,0:12:36.10:0,36,398	0/0:19,0:19:48.09:0,48,513	0/0:10,0:10:24.06:0,24,265	0/0:15,0:15:42.11:0,42,465	1/1:3,12:13:26.99:234,27,0	0/0:6,0:6:12.01:0,12,123
chr10	83244624	.	TA	T	584.01	PASS	AB=0.883;AC=6;AF=0.107;AN=56;BaseQRankSum=5.133;DP=392;FS=4.957;HRun=10;HaplotypeScore=42.6562;InbreedingCoeff=0.5531;MQ=65.77;MQ0=4;MQRankSum=-0.958;QD=9.42;ReadPosRankSum=0.156;VQSLOD=1.5303;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,17:23:50.96:443,51,0	0/0:4,0:4:12.02:0,12,125	0/0:9,0:6:6.90:0,7,69	0/1:8,1:6:14.03:14,0,78	0/0:9,0:9:20.53:0,21,200	0/0:14,0:14:42.09:0,42,455	1/1:5,12:17:29.90:252,30,0	0/0:17,0:17:32.98:0,33,341	0/0:17,0:17:33.07:0,33,356	0/0:16,0:15:30.08:0,30,331	0/0:10,0:10:12.03:0,12,133	0/0:14,0:14:36.08:0,36,389	0/0:12,0:12:27.07:0,27,299	0/0:15,0:15:30.07:0,30,325	0/0:15,0:15:36.10:0,36,398	0/1:11,2:13:8.01:8,0,148	0/0:19,1:20:31.10:0,31,562	0/0:3,0:17:39.91:0,40,206	0/0:12,1:13:1:0,1,219	0/0:9,0:10:26.91:0,27,280	0/0:14,0:14:27.06:0,27,291	0/0:15,0:15:33.07:0,33,356	0/0:8,0:8:18.04:0,18,194	0/0:13,0:13:30.08:0,30,332	0/0:14,0:15:29.91:0,30,313	0/0:20,0:20:45.11:0,45,491	0/0:22,0:22:42.10:0,42,457	0/0:11,0:11:21.03:0,21,215
chr10	83245688	.	CT	C	3676.63	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.694;DP=470;FS=4.006;HRun=2;HaplotypeScore=45.5769;InbreedingCoeff=0.9757;MQ=54.53;MQ0=8;MQRankSum=-5.022;QD=30.39;ReadPosRankSum=-1.902;VQSLOD=2.6459;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.19:0,84,1210	0/0:8,0:8:24.08:0,24,360	0/0:5,0:4:9.03:0,9,126	0/0:7,0:6:13.17:0,13,124	0/0:15,0:15:42.12:0,42,579	0/0:21,0:21:63.21:0,63,939	0/0:25,0:25:75.25:0,75,1117	1/1:8,34:35:96.27:1223,96,0	0/0:9,0:9:27.09:0,27,405	0/0:22,0:22:66.22:0,66,983	0/0:14,0:14:39.13:0,39,585	0/0:11,0:11:33.11:0,33,495	0/0:10,0:10:30.08:0,30,413	0/0:12,0:12:36.12:0,36,538	0/0:13,0:13:39.13:0,39,573	0/0:20,0:20:60.20:0,60,897	0/0:27,0:26:78.26:0,78,1163	0/0:22,0:22:66.22:0,66,984	1/1:6,19:22:53.66:669,54,0	1/1:0,7:6:15.05:195,15,0	1/1:1,22:22:57.07:697,57,0	0/0:9,0:9:27.09:0,27,405	0/0:11,0:11:33.11:0,33,488	0/0:20,0:20:60.20:0,60,894	0/0:13,0:13:39.11:0,39,546	0/0:17,0:17:50.76:0,51,730	1/1:0,24:24:69.22:893,69,0	0/0:8,0:8:24.08:0,24,359
chr10	83246791	.	T	TGAGGCA	1965.14	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.029;DP=635;FS=14.367;HRun=0;HaplotypeScore=141.4966;InbreedingCoeff=0.9594;MQ=76.87;MQ0=0;MQRankSum=-7.640;QD=35.73;ReadPosRankSum=-1.679;VQSLOD=2.3070;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,15:36:45.07:1293,45,0	0/0:5,0:5:12.04:0,12,256	0/0:33,0:32:14.76:0,15,886	0/0:27,0:22:38.79:0,39,664	0/0:14,0:14:26.86:0,27,447	0/0:21,0:21:42.12:0,42,818	1/1:9,10:19:24.08:793,24,0	0/0:30,0:30:60.16:0,60,981	0/0:13,0:13:33.11:0,33,682	0/0:9,0:9:18.06:0,18,284	0/0:14,0:14:21.93:0,22,403	0/0:28,0:28:63.16:0,63,1167	0/0:20,0:20:48.15:0,48,962	0/0:27,0:27:75.25:0,75,1546	0/0:23,0:23:57.17:0,57,1117	0/0:23,0:23:57.18:0,57,1176	0/0:29,0:29:63.22:0,63,1299	0/0:22,0:22:33.11:0,33,702	0/0:19,0:19:36.08:0,36,595	0/0:14,0:14:24.03:0,24,391	0/0:55,0:55:99:0,114,2214	0/0:22,0:22:47.85:0,48,806	0/0:17,0:17:29.79:0,30,516	0/0:34,0:34:84.29:0,84,1748	0/0:21,0:21:39.02:0,39,623	0/0:26,0:26:45.08:0,45,801	0/0:25,0:25:51.17:0,51,1041	0/0:9,0:9:15.04:0,15,281
chr10	83247242	.	C	CT	1007.97	PASS	AB=0.965;AC=9;AF=0.161;AN=56;BaseQRankSum=-4.672;DP=644;FS=4.702;HRun=12;HaplotypeScore=76.6018;InbreedingCoeff=0.5529;MQ=68.82;MQ0=4;MQRankSum=-0.659;QD=6.50;ReadPosRankSum=-1.095;VQSLOD=2.2422;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:27:41.64:0,42,134	0/0:8,0:8:20.87:0,21,153	0/1:18,0:14:13.82:14,0,59	0/1:33,0:24:8.14:8,0,80	0/0:38,2:41:25.89:0,26,529	0/0:27,0:27:55.26:0,55,421	0/0:2,0:9:12.21:0,12,35	0/0:25,0:26:49.64:0,50,354	0/0:21,1:22:15.49:0,15,276	0/0:32,0:33:70.59:0,71,509	0/0:25,0:27:52.51:0,53,371	0/0:8,0:8:14.88:0,15,109	0/0:16,0:17:24.83:0,25,164	0/0:17,0:17:21.83:0,22,249	0/0:23,0:25:41.92:0,42,379	0/0:16,0:19:47.86:0,48,324	0/0:20,0:20:50.66:0,51,369	1/1:8,13:22:10.08:401,10,0	0/0:17,3:19:9.80:0,10,179	0/0:19,1:24:11.67:0,12,238	0/0:25,0:25:59.63:0,60,437	0/0:19,0:19:47.65:0,48,348	0/0:30,1:34:26.66:0,27,467	0/0:21,0:21:40.82:0,41,292	0/0:17,0:18:40.78:0,41,290	1/1:13,18:31:31.28:425,31,0	0/1:29,4:34:67.33:67,0,346	1/1:3,9:12:8.14:241,8,0
chr10	83250562	.	C	CAGATCAGCTTT	22644.17	PASS	AB=0.742;AC=54;AF=0.964;AN=56;BaseQRankSum=1.444;DP=285;FS=41.141;HRun=0;HaplotypeScore=314.9734;InbreedingCoeff=-0.0624;MQ=69.44;MQ0=0;MQRankSum=-3.125;QD=79.45;ReadPosRankSum=3.005;VQSLOD=3.1346;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:9.03:255,9,0	1/1:8,0:8:12.04:498,12,0	0/1:7,2:11:83.67:877,0,84	0/1:4,0:6:21.38:286,0,21	1/1:16,0:16:29.89:1196,30,0	1/1:11,0:11:24.08:1215,24,0	1/1:7,0:7:12.04:516,12,0	1/1:11,0:11:30.08:1088,30,0	1/1:14,0:14:27.56:1281,28,0	1/1:13,0:13:30.08:1140,30,0	1/1:11,0:11:21.07:896,21,0	1/1:11,0:11:21.07:953,21,0	1/1:10,0:10:15.05:624,15,0	1/1:14,0:14:27.09:1218,27,0	1/1:16,0:16:24.08:1059,24,0	1/1:18,0:18:38.61:1451,39,0	1/1:8,0:8:9.03:428,9,0	1/1:4,0:4:3.01:72,3,0	1/1:3,0:3:3.01:87,3,0	1/1:13,0:13:30.10:1299,30,0	1/1:6,0:6:15.05:555,15,0	1/1:21,0:21:42.14:1705,42,0	1/1:10,0:10:24.04:884,24,0	1/1:8,0:8:12.04:628,12,0	1/1:8,0:8:18.06:874,18,0	1/1:7,0:7:15.05:576,15,0	1/1:10,0:10:15.05:549,15,0	1/1:5,0:5:12.04:433,12,0
chr10	83251101	.	TGC	T	107.12	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=8.865;DP=848;FS=28.852;HRun=0;HaplotypeScore=263.8854;InbreedingCoeff=0.1694;MQ=40.80;MQ0=1;MQRankSum=-8.459;QD=0.84;ReadPosRankSum=2.869;VQSLOD=1.3810;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,3:36:3.81:0,4,234	0/0:13,0:13:15.26:0,15,211	0/0:20,0:17:51.18:0,51,1022	0/0:26,0:24:73.48:0,73,1391	0/0:26,0:26:5.50:0,6,121	0/0:19,0:19:10.93:0,11,189	0/0:27,1:28:28.84:0,29,606	0/1:56,0:56:99:170,0,2166	0/0:42,0:42:23.94:0,24,488	0/0:56,0:54:9.17:0,9,1674	0/0:26,0:26:2.64:0,3,59	0/0:51,0:51:14.72:0,15,392	0/0:38,0:38:15.45:0,15,483	0/1:27,0:27:0.02:1,0,0	0/0:48,0:48:18.09:0,18,479	0/0:37,0:37:19.22:0,19,368	0/0:15,0:15:9.60:0,10,239	0/0:9,0:9:18.50:0,18,326	0/1:22,0:20:24.02:24,0,914	1/1:23,0:23:0.18:1,0,0	0/0:43,2:46:73.05:0,73,1362	0/0:40,0:40:17.86:0,18,358	0/0:26,0:26:11.37:0,11,239	0/0:24,0:24:16.20:0,16,319	0/0:23,0:23:20.31:0,20,424	0/0:40,0:40:76.03:0,76,1754	0/0:22,0:22:24.05:0,24,430	0/0:7,1:8:9.04:0,9,133
chr10	83251105	.	CATATAACAA	C	650.87	PASS	AB=0.920;AC=8;AF=0.143;AN=56;BaseQRankSum=10.232;DP=908;FS=53.077;HRun=0;HaplotypeScore=337.6235;InbreedingCoeff=-0.1656;MQ=42.02;MQ0=2;MQRankSum=-9.493;QD=2.25;ReadPosRankSum=3.021;VQSLOD=1.0475;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:38,2:40:19.40:19,0,1358	0/1:9,5:14:8.87:9,0,550	0/0:25,0:20:60.12:0,60,2619	0/0:33,0:27:77.75:0,78,3481	0/0:26,3:29:31.42:0,31,783	0/1:18,2:20:3.69:4,0,545	0/0:28,2:30:60.14:0,60,1869	0/1:60,0:60:68.88:69,0,5196	0/0:44,0:44:99:0,99,2312	0/1:56,5:59:99:377,0,4520	0/0:26,2:28:18.21:0,18,361	0/0:54,0:54:91.76:0,92,2155	0/1:39,1:40:49.91:50,0,1804	0/0:28,0:28:66.19:0,66,952	0/0:50,1:51:97.87:0,98,2507	0/0:39,0:39:52.01:0,52,1839	0/0:15,0:15:28.90:0,29,751	0/0:9,0:9:2.65:0,3,834	0/0:23,0:21:40.27:0,40,2344	0/0:21,3:24:18.51:0,19,217	0/0:48,0:48:99:0,107,3771	0/0:40,1:41:47.31:0,47,1122	0/0:25,2:27:32.80:0,33,760	0/0:24,0:24:44.06:0,44,1081	0/0:22,1:23:57.23:0,57,1533	0/1:42,2:44:99:136,0,4506	0/0:24,0:24:50.97:0,51,1575	0/1:9,1:10:99:117,0,332
chr10	83251119	.	AT	A	993.33	PASS	AB=0.809;AC=8;AF=0.143;AN=56;BaseQRankSum=12.447;DP=1066;FS=66.034;HRun=1;HaplotypeScore=316.5147;InbreedingCoeff=-0.1564;MQ=44.31;MQ0=5;MQRankSum=-8.542;QD=3.60;ReadPosRankSum=1.747;VQSLOD=-0.6846;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,1:46:85.85:0,86,1280	0/0:10,1:14:24.42:0,24,272	0/0:47,0:27:75.18:0,75,1084	0/0:44,1:34:99:0,99,1574	0/0:27,8:37:33.08:0,33,505	0/1:14,2:17:16.72:17,0,309	0/0:33,1:35:64.94:0,65,1028	0/0:44,0:58:99:0,114,1970	0/0:45,0:46:99:0,111,1761	0/1:54,14:70:99:690,0,1716	0/0:17,5:27:17.56:0,18,285	0/0:40,8:53:85.73:0,86,1380	0/1:33,6:43:38.54:39,0,1015	0/0:30,1:33:74.48:0,74,1192	0/0:55,2:60:99:0,136,2158	0/0:38,2:43:65.23:0,65,1541	0/0:18,0:18:20.16:0,20,377	0/1:13,1:14:1.11:1,0,412	0/0:23,0:23:63.16:0,63,939	0/1:18,9:31:24.61:25,0,221	0/0:60,0:61:99:0,125,1954	0/0:28,15:49:32.11:0,32,527	0/0:23,5:30:26.20:0,26,431	0/0:26,2:29:47.48:0,47,698	0/0:30,3:36:63.76:0,64,984	0/1:48,4:57:91.42:91,0,1821	0/1:16,8:25:99:123,0,660	0/1:12,5:17:99:139,0,396
chr10	83251360	.	C	CTGTGTGTGTGTG	2616.28	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=2.541;DP=673;FS=9.685;HRun=0;HaplotypeScore=232.6981;InbreedingCoeff=0.8128;MQ=58.59;MQ0=5;MQRankSum=-0.827;QD=10.10;ReadPosRankSum=-2.944;VQSLOD=0.3008;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:35:38.93:596,39,0	0/0:12,0:12:27.53:0,28,816	0/1:31,0:14:16.92:23,0,17	0/1:33,0:14:0.21:0,0,6	0/0:27,0:27:14.10:0,14,564	0/0:21,0:23:48.11:0,48,1390	1/1:31,0:32:26.85:329,27,0	1/1:18,0:18:26.95:318,27,0	0/0:22,0:24:60.13:0,60,1588	0/0:30,0:30:65.81:0,66,949	0/0:24,0:23:26.59:0,27,447	0/0:23,0:25:57.14:0,57,1466	0/0:25,0:26:60.18:0,60,1743	0/0:21,0:21:32.78:0,33,1048	0/0:34,0:35:72.11:0,72,1702	0/0:28,0:28:66.17:0,66,1782	0/0:18,0:18:45.12:0,45,1297	0/0:21,0:22:20.86:0,21,1142	1/1:18,0:17:29.89:357,30,0	1/1:25,1:26:30.01:557,30,0	1/1:24,0:24:14.98:158,15,0	0/1:19,0:20:1.33:1,0,224	0/0:14,0:14:20.86:0,21,390	0/0:34,0:34:78.17:0,78,2018	0/0:18,0:18:22.79:0,23,833	0/0:21,0:21:33:0,33,640	1/1:8,11:22:12.51:472,13,0	0/0:11,0:11:24:0,24,557
chr10	83252109	.	CATTT	C	1043.97	PASS	AB=0.700;AC=25;AF=0.625;AN=40;BaseQRankSum=-2.273;DP=292;FS=1.051;HRun=0;HaplotypeScore=54.1256;InbreedingCoeff=0.4517;MQ=81.09;MQ0=2;MQRankSum=1.752;QD=8.63;ReadPosRankSum=0.347;VQSLOD=1.7509;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:21.06:0,21,425	1/1:4,0:4:3.01:46,3,0	./.	./.	1/1:9,1:10:3.01:46,3,0	1/1:12,4:16:9.03:137,9,0	./.	0/0:34,0:33:0:0,0,0	0/0:7,0:7:3.01:0,3,65	1/1:6,5:11:15.05:220,15,0	1/1:2,0:2:3:25,3,0	./.	./.	1/1:4,1:5:3.01:46,3,0	1/1:2,2:4:3.01:46,3,0	0/1:4,3:7:39.77:40,0,46	1/1:7,11:18:15.05:229,15,0	0/0:13,0:13:2.13:0,2,438	0/0:23,0:23:6.02:0,6,140	1/1:10,2:12:6.02:75,6,0	./.	./.	./.	1/1:10,0:10:9.03:133,9,0	1/1:6,5:11:6.02:92,6,0	0/0:12,0:12:6.01:0,6,66	1/1:7,4:11:3.01:46,3,0	0/0:22,0:22:11.47:0,11,128
chr10	83252377	.	G	GA	3220.27	PASS	AB=0.775;AC=14;AF=0.250;AN=56;BaseQRankSum=-10.549;DP=431;FS=0.421;HRun=8;HaplotypeScore=44.5685;InbreedingCoeff=0.8525;MQ=72.78;MQ0=0;MQRankSum=-0.353;QD=19.76;ReadPosRankSum=-1.322;VQSLOD=2.7606;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,18:29:63.01:696,63,0	0/0:6,0:6:18.01:0,18,165	0/1:30,0:21:22.06:22,0,180	0/0:25,0:19:32.82:0,33,293	0/0:9,0:9:27.01:0,27,247	0/0:18,0:18:48.02:0,48,439	1/1:2,12:14:33.10:381,33,0	1/1:6,15:21:17.67:457,18,0	0/0:16,0:16:48.03:0,48,439	0/0:8,0:8:24:0,24,213	0/0:9,0:9:24.01:0,24,220	0/0:11,0:11:30.01:0,30,274	0/0:12,0:12:36.02:0,36,329	0/0:12,0:12:33.01:0,33,302	0/0:20,0:20:57.03:0,57,522	0/0:16,0:16:48.03:0,48,439	0/0:21,0:21:57.03:0,57,521	0/0:12,0:12:33.01:0,33,302	1/1:1,18:19:56.96:636,57,0	0/1:2,9:11:0.36:250,0,0	1/1:3,12:15:30.09:346,30,0	0/0:8,0:8:24.01:0,24,220	0/0:6,0:6:18:0,18,161	0/0:14,0:14:39.01:0,39,356	0/0:17,0:17:51.01:0,51,463	0/0:19,0:19:42.01:0,42,382	1/1:2,22:24:54.16:623,54,0	0/0:8,0:8:24.01:0,24,219
chr10	83252457	.	G	GA	934.61	PASS	AB=0.889;AC=5;AF=0.089;AN=56;BaseQRankSum=-5.827;DP=489;FS=0.000;HRun=9;HaplotypeScore=53.5774;InbreedingCoeff=0.7061;MQ=79.96;MQ0=2;MQRankSum=-1.008;QD=18.69;ReadPosRankSum=0.609;VQSLOD=3.7168;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:28:66.16:720,66,0	0/0:10,0:10:23.98:0,24,208	0/0:21,0:21:27.41:0,27,242	0/0:27,0:23:26.21:0,26,277	0/0:17,0:17:44.75:0,45,387	0/0:21,0:21:56.99:0,57,494	1/1:3,11:14:30.08:332,30,0	0/0:25,0:25:53.44:0,53,442	0/0:13,0:13:38.96:0,39,330	0/0:14,0:14:32.97:0,33,282	0/0:10,0:10:26.99:0,27,234	0/0:12,0:12:18.12:0,18,160	0/0:7,0:8:23.03:0,23,188	0/0:14,1:15:2.81:0,3,253	0/0:26,0:26:65.92:0,66,561	0/0:15,0:15:35.98:0,36,312	0/0:25,0:25:74.94:0,75,644	0/0:25,0:25:65.99:0,66,573	0/0:15,1:16:11.81:0,12,331	0/0:12,0:12:29.99:0,30,260	0/0:23,0:23:59.98:0,60,521	0/0:13,0:13:29.97:0,30,257	0/1:7,1:8:9.18:9,0,158	0/0:14,0:14:35.99:0,36,313	0/0:18,0:18:44.97:0,45,387	0/0:24,2:26:38.80:0,39,566	0/0:30,0:30:68.90:0,69,585	0/0:3,0:3:9:0,9,78
chr10	83253051	.	AAAG	A	773.10	PASS	AB=0.941;AC=29;AF=0.630;AN=46;BaseQRankSum=3.208;DP=482;FS=16.566;HRun=0;HaplotypeScore=63.3520;InbreedingCoeff=0.5649;MQ=49.49;MQ0=19;MQRankSum=1.949;QD=2.93;ReadPosRankSum=-0.580;VQSLOD=0.2127;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:2.86:0,3,16	./.	./.	./.	1/1:17,0:17:9.03:110,9,0	0/0:16,0:15:4.26:0,4,57	./.	./.	0/0:13,0:13:18.05:0,18,263	1/1:14,0:17:10.74:67,11,0	1/1:9,0:9:6.01:63,6,0	0/1:15,1:16:99:158,0,124	1/1:16,0:14:6.59:29,7,0	1/1:14,0:14:7.77:46,8,0	1/1:12,4:15:9.03:111,9,0	0/0:17,0:17:12.02:0,12,153	0/0:30,0:27:9.03:0,9,151	1/1:33,0:25:1.53:4,2,0	1/1:15,0:11:2.68:11,3,0	1/1:16,0:16:4.62:14,5,0	0/0:9,0:8:10.28:0,10,168	1/1:10,1:9:3.01:37,3,0	1/1:17,0:17:2.97:20,3,0	1/1:24,0:19:12.54:71,13,0	1/1:14,8:19:12.04:148,12,0	0/0:17,0:17:6.01:0,6,71	1/1:17,0:15:7.74:44,8,0	0/0:16,0:15:9.03:0,9,153
chr10	83254161	.	G	GACACCTCTGTCTCC	3136.10	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=-5.912;DP=432;FS=17.680;HRun=0;HaplotypeScore=143.5689;InbreedingCoeff=0.8341;MQ=70.42;MQ0=6;MQRankSum=-5.558;QD=42.96;ReadPosRankSum=-0.480;VQSLOD=2.0123;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,7:2:3.01:216,3,0	0/0:10,0:10:18.06:0,18,796	0/0:21,0:18:54.17:0,54,1937	0/0:15,0:12:36.04:0,36,1157	0/0:20,0:20:42.14:0,42,1689	0/0:17,0:17:39.13:0,39,1490	1/1:5,4:1:3.01:216,3,0	1/1:5,0:2:5.99:51,6,0	0/0:21,0:21:51.10:0,51,2020	0/0:24,0:24:72.20:0,72,2780	0/0:14,0:14:21.54:0,22,832	0/0:23,0:23:57.20:0,57,2452	0/0:10,0:10:30.09:0,30,1087	0/0:20,0:20:48.64:0,49,2028	0/0:33,0:33:75.07:0,75,3020	0/0:12,0:12:33.11:0,33,1412	0/0:39,0:39:99:0,111,4554	0/0:24,0:24:54.19:0,54,2155	1/1:6,2:4:3:25,3,0	1/1:4,4:5:9.03:549,9,0	1/1:3,0:2:2.99:24,3,0	0/0:6,0:6:15.04:0,15,557	0/0:12,0:12:27.09:0,27,1149	0/0:23,0:23:66.18:0,66,2800	0/0:12,0:12:33.11:0,33,1394	1/1:8,6:8:15.05:933,15,0	1/1:4,8:6:18.06:1295,18,0	./.
chr10	83257384	.	CAAA	C	997.02	PASS	AB=0.755;AC=11;AF=0.196;AN=56;BaseQRankSum=-0.289;DP=233;FS=5.924;HRun=16;HaplotypeScore=39.3046;InbreedingCoeff=0.4650;MQ=56.45;MQ0=15;MQRankSum=-3.559;QD=11.87;ReadPosRankSum=-0.727;VQSLOD=-0.2460;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,2:4:5.98:65,6,0	0/0:2,0:2:6.02:0,6,107	0/1:21,0:5:10.71:11,0,72	0/0:36,0:14:4.30:0,4,165	0/0:7,1:6:15.05:0,15,214	0/0:10,0:9:21.03:0,21,328	1/1:2,5:7:17.97:179,18,0	0/1:8,8:15:52.11:194,0,52	0/0:3,0:4:12:0,12,154	0/0:9,0:9:18.01:0,18,258	0/0:5,0:5:9.03:0,9,140	0/0:4,0:5:10.25:0,10,116	0/0:4,0:5:15.01:0,15,190	0/0:1,0:1:3.01:0,3,54	0/0:1,0:4:12:0,12,142	0/0:9,0:10:24.06:0,24,377	0/0:12,0:11:27.07:0,27,422	0/0:1,0:5:14.96:0,15,122	0/1:4,6:11:5.26:226,0,5	1/1:1,4:5:8.99:97,9,0	0/0:2,1:3:0:0,0,0	0/0:1,0:1:3.01:0,3,54	0/0:4,0:4:11.99:0,12,180	0/0:1,0:3:7.23:0,7,50	0/0:6,0:6:18.06:0,18,317	0/0:4,0:3:4.26:0,4,46	1/1:3,11:16:32.90:381,33,0	0/0:3,0:2:5.98:0,6,46
chr10	83257978	.	C	CT	7069.70	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-16.434;DP=721;FS=0.000;HRun=4;HaplotypeScore=63.9889;InbreedingCoeff=0.9993;MQ=88.80;MQ0=0;MQRankSum=-0.944;QD=35.53;ReadPosRankSum=-0.559;VQSLOD=4.9173;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,37:38:99:1414,105,0	0/0:15,0:15:45.13:0,45,510	0/0:33,0:33:81.07:0,81,867	0/0:20,0:20:45.09:0,45,494	0/0:36,0:36:96.27:0,96,1087	0/0:20,0:20:57.16:0,57,646	1/1:3,27:30:69.23:944,69,0	1/1:0,30:30:87.28:1175,87,0	0/0:22,0:22:66.18:0,66,740	0/0:28,0:28:78.22:0,78,878	0/0:23,0:23:69.20:0,69,782	0/0:26,0:26:72.17:0,72,797	0/0:25,0:25:75.18:0,75,828	0/0:24,0:24:69.17:0,69,764	0/0:27,0:27:78.22:0,78,885	0/0:27,0:27:75.21:0,75,851	0/0:32,0:32:84.24:0,84,952	0/0:20,0:20:51.12:0,51,566	1/1:2,25:27:75.20:973,75,0	1/1:0,17:17:48.12:635,48,0	1/1:2,29:31:75.25:1026,75,0	0/0:28,0:28:75.21:0,75,851	0/0:27,0:27:75.20:0,75,840	0/0:24,0:24:66.19:0,66,747	0/0:30,0:30:87.23:0,87,977	0/0:28,0:28:78.20:0,78,868	1/1:4,22:26:66.22:903,66,0	0/0:7,0:7:21.06:0,21,238
chr10	83258994	.	T	TGA	443.60	PASS	AB=0.973;AC=22;AF=0.423;AN=52;BaseQRankSum=2.056;DP=529;FS=0.000;HRun=0;HaplotypeScore=93.8665;InbreedingCoeff=0.2187;MQ=47.09;MQ0=17;MQRankSum=0.087;QD=1.49;ReadPosRankSum=-0.300;VQSLOD=1.4173;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:25:1.64:6,2,0	0/1:10,0:10:13.18:13,0,59	./.	./.	0/1:17,0:17:9.17:9,0,65	0/1:30,0:28:3.33:3,0,122	1/1:24,0:21:3.93:27,4,0	0/1:22,0:18:14.97:15,0,17	0/0:18,0:18:8.18:0,8,71	0/0:21,0:21:23.66:0,24,183	0/0:10,0:10:2.99:0,3,23	0/0:18,0:17:8.48:0,8,66	0/0:24,0:24:29.01:0,29,226	0/0:17,0:17:14.72:0,15,117	0/1:33,1:33:14.87:15,0,180	0/0:25,0:25:5.98:0,6,57	0/0:27,0:26:20.43:0,20,160	1/1:19,0:19:22.67:163,23,0	1/1:20,0:18:17.73:132,18,0	0/1:20,0:18:23.53:69,0,24	1/1:14,0:10:5.82:35,6,0	0/0:27,0:27:11.88:0,12,104	0/0:13,0:16:8.97:0,9,72	0/0:23,0:22:5.98:0,6,49	0/1:26,0:25:11.04:11,0,94	1/1:18,0:16:6.48:56,6,0	0/1:10,3:13:6.92:33,0,7	1/1:2,0:2:2.98:21,3,0
chr10	83261522	.	G	GC	7964.60	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-16.043;DP=794;FS=13.017;HRun=2;HaplotypeScore=74.0471;InbreedingCoeff=1.0000;MQ=61.07;MQ0=3;MQRankSum=3.846;QD=36.37;ReadPosRankSum=-0.298;VQSLOD=4.0324;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,141,1719	0/0:15,0:15:42.13:0,42,514	0/0:27,0:24:38.61:0,39,632	0/0:29,0:28:75.19:0,75,880	0/0:21,0:21:57.17:0,57,692	0/0:27,0:26:81.23:0,81,988	0/0:23,0:23:66.19:0,66,805	1/1:2,28:28:75.21:1023,75,0	0/0:34,0:34:99:0,102,1264	0/0:22,0:22:63.20:0,63,781	0/0:14,0:14:39.12:0,39,483	0/0:23,0:23:60.19:0,60,743	0/0:31,0:31:93.29:0,93,1152	0/0:33,0:33:96.27:0,96,1163	0/0:52,0:52:99:0,150,1822	0/0:38,0:38:99:0,99,1226	0/0:44,0:44:99:0,120,1474	1/1:2,31:33:87.29:1252,87,0	1/1:2,14:15:39.13:559,39,0	1/1:1,31:31:84.28:1203,84,0	1/1:7,31:38:84.28:1210,84,0	0/0:22,0:22:60.17:0,60,730	0/0:14,0:14:42.13:0,42,520	0/0:27,0:27:81.25:0,81,1003	0/0:28,0:28:84.22:0,84,1022	1/1:1,23:24:69.23:990,69,0	1/1:0,27:27:75.25:1080,75,0	1/1:0,19:19:45.15:647,45,0
chr10	83261663	.	GA	G	4395.01	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.472;DP=777;FS=4.432;HRun=8;HaplotypeScore=85.3058;InbreedingCoeff=0.9999;MQ=79.85;MQ0=0;MQRankSum=-2.194;QD=23.50;ReadPosRankSum=-1.149;VQSLOD=4.9709;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,1:42:94.27:0,94,1334	0/0:13,0:13:36.11:0,36,433	0/0:27,0:26:48.12:0,48,552	0/0:20,0:19:35.96:0,36,378	0/0:22,0:22:54.64:0,55,650	0/0:23,1:23:34.28:0,34,682	0/0:23,0:23:63.18:0,63,747	1/1:3,35:38:99:930,102,0	0/0:30,0:30:84.26:0,84,1010	0/0:31,0:31:84.24:0,84,990	0/0:29,0:29:81.25:0,81,972	0/0:16,0:16:48.15:0,48,577	0/0:26,0:26:66.19:0,66,782	0/0:26,0:26:75.20:0,75,873	0/0:34,0:34:96.28:0,96,1146	0/0:25,0:24:63.18:0,63,748	0/0:45,0:44:99:0,129,1527	1/1:5,38:43:99:945,99,0	1/1:1,22:24:68.09:626,68,0	1/1:3,24:27:63.10:608,63,0	1/1:2,31:33:84.13:811,84,0	0/0:27,0:27:75.19:0,75,868	0/0:29,0:29:78.22:0,78,915	0/0:31,1:32:61.30:0,61,1006	0/0:19,0:19:57.12:0,57,657	0/0:33,0:33:90.27:0,90,1074	1/1:3,18:21:52.33:476,52,0	0/0:17,0:17:48.15:0,48,578
chr10	83263166	.	T	TG	563.68	PASS	AB=0.760;AC=5;AF=0.089;AN=56;BaseQRankSum=-0.225;DP=596;FS=2.335;HRun=9;HaplotypeScore=63.0173;InbreedingCoeff=0.5157;MQ=79.52;MQ0=0;MQRankSum=1.279;QD=6.71;ReadPosRankSum=-0.998;VQSLOD=0.8792;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:18,9:27:99:156,0,166	0/0:5,0:5:11.99:0,12,103	0/0:26,0:21:24.84:0,25,226	0/1:23,0:23:1.46:1,0,86	0/0:34,0:34:86.93:0,87,745	0/0:27,0:27:62.98:0,63,546	1/1:6,11:17:26.37:296,26,0	0/0:21,0:21:44.75:0,45,357	0/0:20,0:20:53.96:0,54,460	0/0:25,0:25:68.98:0,69,597	0/0:20,0:20:41.97:0,42,364	0/0:10,0:11:25.98:0,26,203	0/0:21,0:21:47.81:0,48,400	0/0:19,0:19:47.95:0,48,410	0/0:26,0:26:65.93:0,66,562	0/0:28,0:28:63.34:0,63,590	0/0:19,0:19:50.80:0,51,415	0/1:4,12:16:0.92:225,0,1	0/0:16,0:16:41.95:0,42,356	0/0:25,0:25:56.75:0,57,474	0/0:24,2:26:24.75:0,25,443	0/0:32,1:33:83.80:0,84,712	0/0:20,0:20:38.94:0,39,330	0/0:30,0:30:74.93:0,75,641	0/0:16,0:17:40.99:0,41,337	0/0:20,0:20:38.98:0,39,338	0/0:18,0:18:47.95:0,48,409	0/0:5,0:5:11.99:0,12,104
chr10	83263577	.	ATATG	A	3901.14	PASS	AB=0.957;AC=17;AF=0.327;AN=52;BaseQRankSum=11.140;DP=765;FS=2.600;HRun=0;HaplotypeScore=121.9724;InbreedingCoeff=0.9064;MQ=62.51;MQ0=5;MQRankSum=2.937;QD=17.49;ReadPosRankSum=3.701;VQSLOD=3.6348;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:49.96:0,50,1065	0/0:16,0:16:39.12:0,39,825	./.	./.	0/0:8,0:32:73.46:0,73,978	1/1:11,11:22:18.06:287,18,0	0/0:25,0:25:42.09:0,42,818	0/0:42,0:42:48.16:0,48,997	0/0:30,0:30:57.18:0,57,1296	0/0:42,1:43:36.36:0,36,1672	0/0:28,0:28:57.18:0,57,1203	1/1:8,12:20:27.09:430,27,0	0/0:24,0:24:45.08:0,45,858	0/0:29,0:29:60.17:0,60,1289	0/0:28,0:28:45.14:0,45,898	0/0:34,0:34:72.25:0,72,1681	0/1:21,1:22:2.78:3,0,764	1/1:8,19:26:33.11:527,33,0	0/0:17,0:16:21.05:0,21,394	0/0:35,0:35:81.25:0,81,1699	1/1:8,21:29:33.11:527,33,0	0/0:33,0:33:72.23:0,72,1568	1/1:9,19:28:36.12:575,36,0	1/1:10,10:20:15.05:240,15,0	0/0:37,0:37:81.27:0,81,1850	1/1:13,24:37:3.14:977,3,0	0/0:41,0:41:78.22:0,78,1612	1/1:7,11:18:21.07:335,21,0
chr10	83268547	.	A	AT	1350.62	PASS	AB=0.933;AC=20;AF=0.357;AN=56;BaseQRankSum=8.809;DP=518;FS=1.911;HRun=13;HaplotypeScore=75.2468;InbreedingCoeff=0.6405;MQ=74.26;MQ0=5;MQRankSum=-1.635;QD=6.08;ReadPosRankSum=-2.201;VQSLOD=2.1050;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:47.04:0,47,159	0/0:10,0:11:25.78:0,26,168	0/0:39,0:15:12.38:0,12,113	0/1:22,0:14:3.28:8,0,3	0/0:18,1:19:3.50:0,4,160	0/1:11,1:13:5.04:5,0,104	0/0:19,0:19:25.18:0,25,75	1/1:28,0:29:21.01:314,21,0	0/1:12,2:14:19.96:20,0,170	0/0:13,0:13:32.69:0,33,224	0/0:8,1:10:9.01:0,9,120	0/0:19,1:21:24.65:0,25,297	0/0:12,1:13:4.85:0,5,177	0/0:10,1:12:0.76:0,1,133	0/0:18,0:18:29.52:0,30,196	0/0:15,0:15:35.61:0,36,244	0/0:20,0:20:56.47:0,56,386	1/1:25,0:25:10.93:213,11,0	1/1:21,0:21:21.34:219,21,0	1/1:9,0:9:5.34:63,5,0	1/1:9,0:9:8.79:52,9,0	0/0:6,0:6:11.90:0,12,82	0/0:16,0:16:43.83:0,44,293	0/0:18,0:18:35.67:0,36,247	0/1:12,1:13:1.75:2,0,123	1/1:22,0:22:43.18:286,43,0	1/1:25,0:24:28.72:213,29,0	1/1:20,0:20:23.56:148,24,0
chr10	83268560	.	TA	T	4261.09	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=10.252;DP=494;FS=0.000;HRun=5;HaplotypeScore=63.0298;InbreedingCoeff=0.9833;MQ=74.22;MQ0=5;MQRankSum=-0.542;QD=20.29;ReadPosRankSum=0.356;VQSLOD=4.0446;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,30:37:59.69:657,60,0	0/0:12,0:12:33.69:0,34,358	0/0:41,0:13:26.44:0,26,229	0/0:26,0:15:11.09:0,11,81	0/0:17,1:18:47.08:0,47,475	0/0:10,0:10:24.93:0,25,272	1/1:11,9:20:47.84:535,48,0	1/1:17,13:31:67.72:620,68,0	0/0:13,0:13:39.08:0,39,443	0/0:11,0:11:33.10:0,33,396	0/0:10,0:10:27.01:0,27,291	0/0:21,0:21:57.04:0,57,627	0/0:14,0:14:39.09:0,39,446	0/0:12,0:12:32.09:0,32,341	0/0:14,0:14:33.06:0,33,353	0/0:15,0:15:42.11:0,42,497	0/0:22,0:22:66.15:0,66,772	1/1:3,23:28:49.20:513,49,0	1/1:2,15:19:46.71:402,47,0	1/1:5,3:9:19.62:170,20,0	1/1:2,3:5:11.87:114,12,0	0/0:4,0:4:12.04:0,12,148	0/0:18,0:18:51.14:0,51,609	0/0:12,0:12:36.11:0,36,445	0/0:11,0:11:30.05:0,30,323	1/1:5,15:20:47.97:493,48,0	1/1:2,21:26:44.28:454,44,0	1/1:2,13:15:28.30:303,28,0
chr10	83271739	.	C	CA	6994.89	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.615;DP=733;FS=5.089;HRun=2;HaplotypeScore=69.9887;InbreedingCoeff=0.9999;MQ=80.75;MQ0=0;MQRankSum=-5.258;QD=39.52;ReadPosRankSum=-1.544;VQSLOD=4.7075;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1455	0/0:12,0:12:32.30:0,32,383	0/0:19,0:19:56.94:0,57,652	0/0:17,0:17:45.14:0,45,569	0/0:26,0:26:75.24:0,75,973	0/0:21,0:21:63.20:0,63,814	0/0:33,0:33:96.30:0,96,1230	1/1:2,37:39:99:1624,111,0	0/0:28,0:28:84.27:0,84,1089	0/0:45,0:45:99:0,135,1736	0/0:23,0:23:66.11:0,66,834	0/0:18,0:18:51.15:0,51,648	0/0:31,0:31:90.29:0,90,1168	0/0:20,0:20:60.20:0,60,779	0/0:29,0:29:87.26:0,87,1101	0/0:26,0:26:72.22:0,72,916	0/0:23,0:23:69.18:0,69,863	1/1:1,27:28:78.26:1169,78,0	1/1:1,19:20:58.44:857,58,0	1/1:0,36:37:96.28:1414,96,0	1/1:2,23:25:54.18:809,54,0	0/0:26,0:26:72.21:0,72,917	0/0:20,0:20:60.15:0,60,760	0/0:30,0:30:90.25:0,90,1149	0/0:27,0:27:78.24:0,78,995	0/0:25,0:25:75.23:0,75,959	1/1:0,27:27:75.09:1121,75,0	0/0:17,0:17:51.17:0,51,662
chr10	83273896	.	CT	C	335.48	PASS	AB=0.879;AC=8;AF=0.143;AN=56;BaseQRankSum=3.764;DP=615;FS=1.065;HRun=15;HaplotypeScore=75.7095;InbreedingCoeff=0.0968;MQ=70.77;MQ0=6;MQRankSum=-0.219;QD=2.54;ReadPosRankSum=0.699;VQSLOD=-0.4291;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,2:42:53.09:0,53,629	0/1:5,1:6:13.27:13,0,21	0/1:24,1:17:16.82:17,0,76	0/1:15,0:8:0.81:1,0,18	0/1:16,3:19:6.35:6,0,133	0/0:14,0:14:32.96:0,33,281	0/0:19,4:24:12.28:0,12,341	0/0:26,3:29:2.94:0,3,260	0/0:19,0:19:36.84:0,37,308	0/0:22,2:26:16.15:0,16,309	0/0:11,1:15:6.43:0,6,176	0/0:24,0:27:47.78:0,48,396	0/0:28,0:29:49.75:0,50,414	0/0:11,0:11:6.23:0,6,146	0/0:23,0:24:56.77:0,57,471	0/0:17,1:19:22.73:0,23,253	0/0:26,2:29:12.04:0,12,451	0/0:15,1:17:29.56:0,30,223	0/0:26,1:28:10.56:0,11,204	0/0:11,1:12:10.07:0,10,193	0/0:26,0:33:53.62:0,54,437	0/1:10,0:11:6.95:7,0,99	0/0:15,1:15:1.71:0,2,133	0/0:20,1:22:8.81:0,9,182	0/0:20,3:23:13.85:0,14,249	1/1:19,15:37:31.73:301,32,0	0/0:18,0:19:39.32:0,39,345	0/1:6,9:19:15.57:117,0,16
chr10	83275650	.	ATCTGCTTGGTTGTTCAAGATGGGAAAGGGGTATT	A	2567.71	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=1.835;DP=573;FS=4.311;HRun=0;HaplotypeScore=423.3388;InbreedingCoeff=0.9373;MQ=90.84;MQ0=0;MQRankSum=-7.729;QD=16.89;ReadPosRankSum=-0.771;VQSLOD=0.5855;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:31:3.01:263,3,0	0/0:8,0:8:21.06:0,21,2427	0/0:22,0:22:45.01:0,45,2099	0/0:26,0:26:59.82:0,60,3306	0/0:26,0:26:72.10:0,72,8193	0/0:23,0:23:63.18:0,63,5781	1/1:18,0:18:35.58:292,36,0	1/1:18,0:18:32.92:302,33,0	0/0:21,0:21:57.16:0,57,6279	0/0:28,0:28:81.26:0,81,8973	0/0:15,0:15:44.98:0,45,3542	0/0:23,0:23:61.44:0,61,6619	0/0:22,0:22:66.16:0,66,6994	0/0:22,0:22:51.10:0,51,4740	0/0:40,0:40:99:0,114,11482	0/0:39,0:39:99:0,111,12166	0/0:22,0:22:63.20:0,63,5267	1/1:11,0:11:23.86:180,24,0	1/1:11,0:11:29.61:274,30,0	1/1:5,0:5:11.46:74,11,0	1/1:20,0:20:47.25:318,47,0	0/0:24,0:24:66.14:0,66,6100	0/0:19,0:19:48.08:0,48,3620	0/0:25,0:25:63.17:0,63,6102	0/0:16,0:15:45.14:0,45,5084	1/1:7,0:7:14.87:106,15,0	1/1:1,24:25:7.68:442,8,0	1/1:1,5:6:6.02:526,6,0
chr10	83275680	.	G	GT	903.48	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=8.650;DP=530;FS=10.888;HRun=1;HaplotypeScore=70.4967;InbreedingCoeff=0.8121;MQ=99.58;MQ0=0;MQRankSum=-7.972;QD=11.15;ReadPosRankSum=-0.831;VQSLOD=0.3798;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:2.60:10,3,0	0/0:11,0:11:33.06:0,33,397	0/0:24,0:24:48.79:0,49,786	0/0:37,0:36:99:0,105,1247	0/0:25,0:25:75.24:0,75,968	0/0:22,0:22:63.20:0,63,816	1/1:1,5:6:15.05:222,15,0	1/1:2,0:2:5.96:47,6,0	0/0:24,0:24:72.22:0,72,918	0/0:31,0:31:90.29:0,90,1167	0/0:14,0:14:42.14:0,42,545	0/0:24,0:24:69.22:0,69,893	0/0:25,0:25:72.22:0,72,915	0/0:26,0:26:78.23:0,78,995	0/0:35,0:35:99:0,105,1331	0/0:42,0:42:99:0,126,1609	0/0:22,0:22:66.11:0,66,777	1/1:0,4:4:12.04:179,12,0	1/1:0,3:3:9.03:133,9,0	./.	1/1:2,4:6:9.03:133,9,0	0/0:21,0:20:57.19:0,57,740	0/0:16,0:16:45.14:0,45,571	0/0:25,0:25:75.21:0,75,934	0/0:20,0:19:51.16:0,51,649	1/1:0,8:8:24.04:329,24,0	0/1:24,0:24:8.72:28,0,9	0/0:5,0:5:4.44:0,4,14
chr10	83276053	.	GA	G	1123.91	PASS	AB=0.808;AC=15;AF=0.268;AN=56;BaseQRankSum=3.212;DP=513;FS=0.461;HRun=12;HaplotypeScore=63.6037;InbreedingCoeff=0.2851;MQ=76.51;MQ0=4;MQRankSum=2.146;QD=5.73;ReadPosRankSum=-1.321;VQSLOD=1.5974;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:23:25.69:0,26,134	0/0:10,1:11:0.81:0,1,190	0/1:33,0:22:19.30:19,0,173	0/0:27,0:19:2.62:0,3,75	0/0:20,0:20:47.48:0,47,487	0/0:16,1:18:18.67:0,19,352	0/0:1,1:15:5.75:0,6,106	1/1:11,16:27:6.13:227,6,0	0/1:15,3:18:30.53:31,0,256	0/0:16,1:17:3.82:0,4,221	0/0:16,0:16:42.53:0,43,409	0/0:21,1:22:10.69:0,11,459	0/0:20,0:20:36:0,36,438	0/0:8,0:8:12.48:0,12,183	0/0:24,1:25:13.49:0,13,454	0/0:25,0:27:59.78:0,60,570	0/1:17,3:20:50.66:51,0,239	0/1:4,14:18:2.54:264,0,3	0/1:7,9:16:55.46:173,0,55	1/1:6,7:13:14.81:105,15,0	1/1:1,8:9:23.89:186,24,0	0/0:17,0:17:15.73:0,16,326	0/0:16,0:16:36.06:0,36,358	0/0:23,2:25:19.60:0,20,537	0/0:9,0:8:18.04:0,18,183	0/1:10,2:11:18.55:19,0,178	1/1:1,15:16:26.90:209,27,0	0/1:11,2:13:12.18:12,0,234
chr10	83276113	.	AAC	A	223.99	PASS	AB=0.948;AC=21;AF=0.420;AN=50;BaseQRankSum=3.914;DP=507;FS=0.878;HRun=0;HaplotypeScore=74.4256;InbreedingCoeff=-0.0833;MQ=64.47;MQ0=20;MQRankSum=0.978;QD=0.87;ReadPosRankSum=-0.131;VQSLOD=1.4541;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,1:21:8.89:9,0,160	0/0:3,0:2:0:0,0,0	./.	./.	0/0:14,0:14:2.99:0,3,26	0/1:25,0:25:6.73:7,0,217	0/1:15,0:16:8.36:8,0,18	./.	1/1:11,1:11:11.73:92,12,0	0/0:15,0:11:3.01:0,3,35	0/1:14,0:14:13.78:14,0,136	0/0:15,0:15:11.72:0,12,89	0/1:11,1:12:19.76:20,0,117	0/1:19,2:19:41.76:42,0,146	0/1:24,0:24:5.96:6,0,194	0/0:22,0:22:32.81:0,33,412	0/0:20,0:19:15.80:0,16,168	0/1:14,0:14:12.15:12,0,37	1/1:16,0:16:0.43:1,0,0	1/1:13,0:13:6.80:46,7,0	0/0:34,0:30:2.38:0,2,169	0/1:18,0:18:27.23:27,0,115	0/0:14,0:13:12.51:0,13,167	0/0:25,0:25:5.32:0,5,167	0/1:11,3:14:42.47:42,0,140	0/1:11,0:12:5.22:5,0,51	1/1:13,0:13:1.28:19,1,0	1/1:7,0:8:2.84:14,3,0
chr10	83276165	.	CAG	C	1552.85	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=-0.447;DP=552;FS=14.955;HRun=0;HaplotypeScore=76.5140;InbreedingCoeff=0.3681;MQ=61.40;MQ0=23;MQRankSum=-0.158;QD=7.96;ReadPosRankSum=-1.700;VQSLOD=1.7713;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:8.94:0,9,423	0/0:2,0:2:2.79:0,3,25	0/0:27,0:17:30.95:0,31,293	0/0:29,0:15:3.56:0,4,288	0/1:13,0:13:1.14:1,0,154	0/0:16,6:22:1.32:0,1,364	0/0:17,0:16:41.24:0,41,321	1/1:23,0:20:39.34:454,39,0	0/1:12,0:12:17.40:17,0,102	0/0:17,0:15:39.20:0,39,363	0/0:11,0:11:13.66:0,14,152	0/0:20,0:19:37.12:0,37,324	0/0:20,0:20:42.48:0,42,425	0/1:16,0:16:33.87:34,0,196	0/1:27,0:27:1.11:1,0,483	0/0:29,0:29:49.76:0,50,662	0/0:18,0:17:11.12:0,11,322	0/1:8,0:8:11.28:70,0,11	1/1:14,0:13:38.95:335,39,0	1/1:12,0:12:32.92:303,33,0	0/1:47,0:43:13.88:444,0,14	0/0:21,0:21:21.64:0,22,364	0/0:14,0:13:9.91:0,10,237	0/0:24,0:24:41.69:0,42,489	0/0:26,0:24:29.96:0,30,483	0/0:26,0:24:70.14:0,70,586	1/1:5,18:20:6.39:56,6,0	0/0:3,0:2:4.54:0,5,27
chr10	83278033	.	T	TCATAC	19456.20	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-13.886;DP=766;FS=1.658;HRun=0;HaplotypeScore=131.3990;InbreedingCoeff=0.9997;MQ=80.18;MQ0=1;MQRankSum=-10.017;QD=66.86;ReadPosRankSum=0.449;VQSLOD=5.8218;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,36:47:99:3057,99,0	0/0:11,0:11:30.10:0,30,638	0/0:40,0:40:99:0,114,2316	0/0:26,0:26:75.19:0,75,1401	0/0:22,0:22:60.21:0,60,1278	0/0:32,0:32:87.28:0,87,1759	1/1:9,19:30:69.19:1907,69,0	1/1:15,17:37:93.26:2367,93,0	0/0:28,0:28:81.26:0,81,1669	0/0:31,0:31:84.29:0,84,1784	0/0:17,0:17:51.17:0,51,1067	0/0:28,0:28:84.29:0,84,1777	0/0:33,0:33:93.29:0,93,1889	0/0:27,0:27:81.26:0,81,1686	0/0:32,0:32:90.31:0,90,1901	0/0:23,0:23:66.20:0,66,1297	0/0:29,0:29:78.25:0,78,1606	1/1:3,20:25:51.18:1597,51,0	1/1:6,8:12:33.11:941,33,0	1/1:3,22:26:60.21:1877,60,0	1/1:3,21:24:49.91:1520,50,0	0/0:25,0:25:75.23:0,75,1487	0/0:18,0:18:54.19:0,54,1128	0/0:29,0:29:87.27:0,87,1760	0/0:24,0:24:66.23:0,66,1390	1/1:11,23:33:32.36:2571,32,0	1/1:3,28:35:93.32:2869,93,0	1/1:4,7:12:27.09:748,27,0
chr10	83280335	.	T	TTGTGTG	923.31	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=7.893;DP=800;FS=2.039;HRun=0;HaplotypeScore=177.2600;InbreedingCoeff=0.5490;MQ=65.47;MQ0=29;MQRankSum=-4.127;QD=5.05;ReadPosRankSum=-4.202;VQSLOD=1.7673;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,19:44:14.80:279,15,0	0/0:12,0:13:26.96:0,27,464	0/0:35,0:18:7.92:0,8,124	0/1:36,0:17:1.09:1,0,7	0/0:27,0:29:53.98:0,54,1044	0/0:24,0:24:36.09:0,36,599	0/1:33,0:33:99:164,0,104	0/0:30,0:33:7.14:0,7,149	0/0:23,0:25:52.05:0,52,967	0/0:30,0:28:39.13:0,39,748	0/0:16,0:17:31.09:0,31,617	0/0:31,0:29:51.13:0,51,875	0/0:26,0:26:50.78:0,51,807	0/0:24,0:25:47.82:0,48,790	0/0:27,0:29:60.20:0,60,1145	0/0:37,0:37:31.09:0,31,1116	0/0:24,0:26:24.27:0,24,775	0/0:19,0:16:5.99:0,6,63	0/0:25,0:24:8.02:0,8,216	0/1:27,0:27:13.04:13,0,174	0/0:45,0:43:6.02:0,6,104	0/0:19,0:22:45.58:0,46,860	0/0:24,0:24:34.40:0,34,743	0/0:32,0:32:57.15:0,57,1025	0/0:27,0:30:60.18:0,60,1042	1/1:33,0:32:50.48:549,50,0	0/0:26,0:24:17.79:0,18,221	1/1:7,0:7:7.32:63,7,0
chr10	83280359	.	GTGTGTCTGTC	G	2288.04	PASS	AB=0.679;AC=8;AF=0.143;AN=56;BaseQRankSum=7.625;DP=804;FS=9.447;HRun=0;HaplotypeScore=212.9947;InbreedingCoeff=0.4436;MQ=53.24;MQ0=31;MQRankSum=-4.941;QD=12.78;ReadPosRankSum=-0.996;VQSLOD=1.6223;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:56:72.14:0,72,1747	0/0:13,0:13:4.59:0,5,1260	0/0:22,0:7:17.99:0,18,236	0/0:26,0:5:9:0,9,104	0/0:33,0:31:78.27:0,78,2605	0/0:20,0:20:51.17:0,51,1500	0/0:32,0:32:56.80:0,57,1298	0/1:30,0:24:9.67:455,0,10	0/0:27,0:27:75.26:0,75,2714	0/0:28,0:27:64.10:0,64,1926	0/0:16,0:15:45.12:0,45,1464	0/0:31,0:29:84.26:0,84,2790	0/0:26,0:25:66.18:0,66,1964	0/0:26,0:24:25.71:0,26,1593	0/0:33,0:33:93.32:0,93,3095	0/0:32,0:32:56.25:0,56,3202	0/0:33,0:33:72.58:0,73,2656	0/1:6,21:23:40.02:108,0,40	0/1:6,13:19:5.77:491,0,6	1/1:5,25:29:16.83:595,17,0	0/1:10,37:43:9.90:54,0,10	0/0:28,0:28:62.90:0,63,2490	0/0:26,0:26:7.39:0,7,1598	0/0:41,0:39:99:0,102,3411	0/0:31,0:31:81.02:0,81,2350	0/0:33,0:32:72.42:0,72,1570	1/1:5,21:24:24.08:732,24,0	0/0:9,0:9:21.07:0,21,399
chr10	83280361	.	GTGTC	G	471.80	PASS	AB=0.946;AC=12;AF=0.214;AN=56;BaseQRankSum=7.591;DP=794;FS=1.433;HRun=0;HaplotypeScore=146.5014;InbreedingCoeff=0.7191;MQ=53.17;MQ0=32;MQRankSum=-5.965;QD=2.32;ReadPosRankSum=-0.141;VQSLOD=2.3844;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:54:65.66:0,66,641	0/0:14,0:14:32.69:0,33,541	0/0:23,0:9:4.95:0,5,54	0/0:25,0:5:3.79:0,4,18	0/0:33,0:31:60.01:0,60,890	0/0:19,0:19:27.02:0,27,410	0/0:31,0:31:27.79:0,28,292	1/1:28,0:23:20.74:144,21,0	0/0:27,0:27:60.11:0,60,1110	0/0:27,0:25:6.61:0,7,564	0/0:16,0:15:24.04:0,24,412	0/0:29,0:28:63.08:0,63,1042	0/1:22,3:24:8.69:9,0,634	0/0:23,0:23:30.02:0,30,477	0/0:32,1:33:27.19:0,27,1081	0/0:32,0:32:63.05:0,63,1239	0/0:31,1:32:24.31:0,24,1033	0/1:25,0:23:3.01:28,0,3	1/1:19,0:19:11.95:97,12,0	1/1:29,0:29:17.93:155,18,0	1/1:47,0:43:2.94:18,3,0	0/0:27,0:27:56.21:0,56,1029	0/0:28,0:28:23.16:0,23,506	0/0:38,0:37:57.04:0,57,1144	0/0:30,0:30:47.65:0,48,697	0/0:35,0:34:54.42:0,54,650	1/1:24,0:23:20.99:189,21,0	0/0:9,0:9:14.96:0,15,120
chr10	83280393	.	C	CTGTCTGTG	4772.78	PASS	AB=0.994;AC=12;AF=0.214;AN=56;BaseQRankSum=-4.839;DP=788;FS=1.048;HRun=0;HaplotypeScore=208.8684;InbreedingCoeff=0.3975;MQ=70.27;MQ0=5;MQRankSum=-0.135;QD=16.92;ReadPosRankSum=-5.090;VQSLOD=3.0935;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:49,0:51:16.12:814,0,16	0/0:13,0:13:33.07:0,33,691	0/0:31,0:26:77.94:0,78,814	0/0:34,0:26:64.67:0,65,639	0/0:35,0:33:87.11:0,87,1454	0/0:14,0:14:39.08:0,39,695	0/1:31,0:31:49.89:435,0,50	0/1:41,0:40:3.11:756,0,3	0/0:28,0:28:81.18:0,81,1637	0/0:30,0:29:78.19:0,78,1320	0/0:16,0:16:36.51:0,37,617	0/0:28,0:28:69.15:0,69,1395	0/0:23,0:23:60.08:0,60,1066	0/0:16,0:16:42.04:0,42,736	0/0:33,0:33:90.22:0,90,1984	0/0:34,0:33:99:0,99,1749	0/0:34,0:34:96.12:0,96,1746	0/1:22,0:22:12.09:129,0,12	0/1:22,0:22:86.11:297,0,86	0/1:25,0:25:99:171,0,142	1/1:44,0:43:23.92:295,24,0	0/0:33,0:33:93.10:0,93,1608	0/0:24,0:24:66.07:0,66,965	0/0:39,0:39:99:0,105,2051	0/0:23,0:23:57.58:0,58,1023	1/1:14,20:35:93.46:1487,93,0	0/0:18,0:18:3:0,3,237	1/1:10,0:10:29.95:390,30,0
chr10	83280586	.	TTAGGTTCACTCGAGATTTAGTTCTGAC	T	641.66	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.835;DP=631;FS=4.287;HRun=0;HaplotypeScore=390.4363;InbreedingCoeff=0.8619;MQ=90.20;MQ0=0;MQRankSum=-2.223;QD=16.04;ReadPosRankSum=0.318;VQSLOD=0.9555;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:9.03:529,9,0	0/0:12,0:12:33.10:0,33,3165	0/0:22,0:22:45.15:0,45,2228	0/0:28,0:28:42.31:0,42,1427	0/0:21,0:21:57.14:0,57,5360	0/0:21,0:21:63.16:0,63,5883	1/1:2,19:21:3.01:213,3,0	0/0:30,0:30:78.12:0,78,4753	0/0:11,0:11:30.09:0,30,3049	0/0:28,0:28:71.27:0,71,6891	0/0:27,0:27:78.22:0,78,7278	0/0:22,0:22:54.06:0,54,4202	0/0:29,0:29:78.25:0,78,8373	0/0:20,0:20:50.76:0,51,5230	0/0:26,0:26:69.14:0,69,7223	0/0:21,0:21:54.19:0,54,5942	0/0:37,0:37:99:0,102,9941	0/0:27,0:27:78.21:0,78,7853	0/0:25,0:24:66.09:0,66,5590	0/0:26,0:26:75.20:0,75,6730	0/0:23,0:23:60.12:0,60,5511	0/0:14,0:14:39.12:0,39,4258	0/0:29,0:29:81.22:0,81,7847	0/0:17,0:17:51.10:0,51,3972	0/0:12,0:12:33.10:0,33,3340	0/0:19,0:19:48.08:0,48,3717	0/0:33,0:32:90.31:0,90,8657	0/0:11,0:11:18.06:0,18,2251
chr10	83282770	.	GA	G	558.84	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.672;DP=614;FS=3.372;HRun=9;HaplotypeScore=74.8807;InbreedingCoeff=0.9959;MQ=77.05;MQ0=2;MQRankSum=-5.841;QD=19.27;ReadPosRankSum=-0.165;VQSLOD=3.9033;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.24:0,87,989	0/0:12,0:12:30.09:0,30,346	0/0:47,1:34:34.79:0,35,463	0/0:42,1:23:32.82:0,33,304	0/0:24,0:25:72.05:0,72,811	0/0:24,0:24:63.19:0,63,726	0/0:24,0:24:60.17:0,60,683	0/0:35,1:36:59.77:0,60,925	0/0:14,0:14:36.09:0,36,406	0/0:17,0:17:33.10:0,33,381	0/0:18,0:19:47.97:0,48,533	0/0:15,0:15:41.96:0,42,465	0/0:17,0:17:48.14:0,48,554	0/0:17,0:18:44.97:0,45,499	0/0:14,0:14:39.10:0,39,441	0/0:20,0:20:48.13:0,48,544	0/0:30,0:30:69.82:0,70,886	0/0:30,0:30:72.21:0,72,831	0/0:21,0:21:60.18:0,60,690	0/0:27,0:27:75.22:0,75,864	0/0:10,0:10:30.07:0,30,335	0/0:13,0:13:33.10:0,33,381	0/0:19,0:19:48.14:0,48,554	0/0:22,0:22:54.16:0,54,623	0/0:20,0:20:54.16:0,54,623	1/1:3,19:22:25.41:487,25,0	0/0:14,0:14:39.11:0,39,444	1/1:1,6:7:21.01:192,21,0
chr10	83282812	.	AG	A	1152.79	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.332;DP=597;FS=5.313;HRun=1;HaplotypeScore=61.1439;InbreedingCoeff=0.9959;MQ=65.02;MQ0=1;MQRankSum=-3.487;QD=32.94;ReadPosRankSum=0.213;VQSLOD=3.0732;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:62.46:0,62,1161	0/0:10,0:10:30.10:0,30,439	0/0:31,0:19:42.81:0,43,538	0/0:22,0:14:20.05:0,20,388	0/0:35,0:34:99:0,102,1445	0/0:23,0:23:69.21:0,69,971	0/0:19,0:19:57.15:0,57,776	0/0:26,0:26:78.20:0,78,1007	0/0:18,0:18:54.17:0,54,771	0/0:18,0:18:54.18:0,54,775	0/0:21,0:21:63.12:0,63,873	0/0:17,0:17:51.16:0,51,727	0/0:23,0:23:69.17:0,69,917	0/0:18,0:18:51.12:0,51,699	0/0:13,0:13:39.12:0,39,552	0/0:26,0:25:78.25:0,78,1122	0/0:33,0:33:95.97:0,96,1344	0/0:19,0:19:57.16:0,57,795	0/0:24,0:24:72.15:0,72,926	0/0:25,0:25:75.24:0,75,1077	0/0:18,0:18:54.15:0,54,750	0/0:16,0:16:48.15:0,48,683	0/0:19,0:19:57.17:0,57,796	0/0:22,0:22:66.22:0,66,963	0/0:21,0:21:63.21:0,63,920	1/1:2,25:27:34.27:957,34,0	0/0:17,0:17:51.16:0,51,726	1/1:1,7:8:24.06:317,24,0
chr10	83285108	.	TC	T	7354.39	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=17.361;DP=792;FS=3.049;HRun=1;HaplotypeScore=95.3751;InbreedingCoeff=0.9983;MQ=80.95;MQ0=0;MQRankSum=-2.053;QD=39.97;ReadPosRankSum=-1.602;VQSLOD=4.5465;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,147,2324	0/0:11,0:11:33.10:0,33,500	0/0:21,0:21:63.16:0,63,941	0/0:20,0:20:48.23:0,48,774	0/0:28,0:28:84.29:0,84,1340	0/0:21,0:21:63.18:0,63,959	0/0:28,0:28:84.27:0,84,1310	1/1:0,35:35:99:1380,105,0	0/0:31,0:31:93.32:0,93,1469	0/0:24,0:24:72.25:0,72,1152	0/0:24,0:24:69.24:0,69,1101	0/0:29,0:29:87.30:0,87,1391	0/0:44,0:44:99:0,129,2029	0/0:34,0:34:99:0,99,1557	0/0:43,0:42:99:0,129,2060	0/0:41,0:41:99:0,123,1938	0/0:22,0:22:60.20:0,60,959	1/1:0,25:25:72.24:1007,72,0	1/1:0,24:24:72.24:1006,72,0	1/1:0,29:29:78.26:1091,78,0	1/1:1,47:48:99:1990,144,0	0/0:29,0:29:84.29:0,84,1342	0/0:17,0:17:51.17:0,51,815	0/0:29,0:29:87.27:0,87,1344	0/0:18,0:18:54.15:0,54,815	0/0:39,0:39:99:0,117,1846	1/1:0,23:23:63.21:881,63,0	0/0:6,0:6:18.03:0,18,241
chr10	83286594	.	C	CT	1047.19	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-6.906;DP=551;FS=9.269;HRun=7;HaplotypeScore=58.1289;InbreedingCoeff=0.7722;MQ=78.41;MQ0=2;MQRankSum=-0.819;QD=14.75;ReadPosRankSum=0.418;VQSLOD=2.5853;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:51.08:0,51,492	0/0:10,0:10:27.02:0,27,255	0/0:30,0:23:28.88:0,29,204	0/1:33,0:21:12.39:12,0,136	0/0:25,0:25:69.09:0,69,661	0/0:24,0:24:66.07:0,66,630	0/0:9,0:9:27.03:0,27,255	0/0:36,0:36:99:0,102,974	0/0:12,0:12:33.05:0,33,319	0/0:26,0:26:72.11:0,72,693	0/0:19,0:19:57.09:0,57,548	0/0:23,0:23:63.08:0,63,598	0/0:17,0:17:42.06:0,42,402	0/0:15,0:15:42.06:0,42,405	0/0:15,0:15:39.06:0,39,376	0/0:13,0:13:36.04:0,36,341	0/0:26,0:26:66.10:0,66,637	0/0:20,0:20:57.09:0,57,550	0/0:29,0:29:78.12:0,78,753	0/0:31,0:31:81.11:0,81,777	0/0:9,0:9:27.04:0,27,260	0/0:5,0:5:12:0,12,110	0/0:10,0:10:27.03:0,27,257	0/0:6,0:6:15.02:0,15,145	0/0:24,0:24:69.11:0,69,666	1/1:0,21:21:63.16:728,63,0	0/0:25,0:25:69.10:0,69,661	1/1:2,15:17:36.11:435,36,0
chr10	83287735	.	C	CTTT	3592.62	PASS	AB=0.720;AC=18;AF=0.321;AN=56;BaseQRankSum=2.927;DP=579;FS=24.866;HRun=12;HaplotypeScore=92.9774;InbreedingCoeff=0.7301;MQ=73.98;MQ0=0;MQRankSum=-1.376;QD=15.55;ReadPosRankSum=-4.052;VQSLOD=-0.5798;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:25:17.94:56,18,0	0/0:12,0:12:27:0,27,301	0/0:19,0:18:18.43:0,18,188	0/0:15,0:13:30:0,30,249	0/0:20,0:20:26.76:0,27,302	0/0:30,0:33:34.67:0,35,580	0/1:10,0:18:4.77:5,0,52	1/1:19,18:45:69.54:1009,70,0	0/0:12,0:12:27.70:0,28,306	0/0:25,0:27:47.64:0,48,516	0/0:15,0:17:43.53:0,44,486	0/0:16,0:18:41.85:0,42,439	0/0:20,0:20:35.96:0,36,403	0/0:25,0:26:59.87:0,60,637	0/0:28,0:32:76.41:0,76,825	0/0:15,0:15:42.11:0,42,471	0/0:21,0:23:50.96:0,51,590	1/1:2,12:14:21.07:385,21,0	1/1:7,16:27:61.69:945,62,0	1/1:5,4:16:42:526,42,0	1/1:2,1:10:4.26:58,4,0	0/0:25,0:26:40.26:0,40,448	0/1:7,0:9:0.55:1,0,135	0/0:11,0:14:25.36:0,25,284	0/0:17,0:17:48.13:0,48,538	0/1:11,0:32:51.61:52,0,98	1/1:3,15:21:38.08:556,38,0	0/1:6,0:13:0.77:1,0,36
chr10	83291510	.	AC	A	1132.34	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=5.603;DP=637;FS=6.624;HRun=7;HaplotypeScore=71.9622;InbreedingCoeff=0.8448;MQ=71.80;MQ0=1;MQRankSum=-0.549;QD=17.42;ReadPosRankSum=-0.108;VQSLOD=3.2897;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1502	0/0:16,0:16:42.12:0,42,516	0/0:20,0:17:17.35:0,17,249	0/1:14,0:12:2.56:3,0,130	0/0:23,0:23:63.19:0,63,771	0/0:11,0:11:27.07:0,27,325	0/0:28,0:28:72.20:0,72,880	0/0:24,0:24:50.95:0,51,535	0/0:20,0:20:60.18:0,60,741	0/0:27,0:27:69.17:0,69,839	0/0:17,0:17:42.13:0,42,518	0/0:21,0:21:57.17:0,57,704	0/0:18,0:18:45.13:0,45,546	0/0:20,0:20:54.16:0,54,667	0/0:30,0:30:84.27:0,84,1055	0/0:17,0:17:48.15:0,48,604	0/0:34,0:34:96.29:0,96,1191	0/0:20,0:20:57.18:0,57,716	0/0:27,0:27:66.21:0,66,828	0/0:16,0:16:39.11:0,39,476	0/0:36,0:36:93.26:0,93,1132	0/0:24,0:24:69.21:0,69,855	0/0:18,0:18:48.15:0,48,602	0/0:19,0:19:57.17:0,57,704	0/0:17,0:17:48.12:0,48,559	1/1:7,26:33:43.37:735,43,0	0/0:26,0:26:69.15:0,69,830	1/1:2,16:18:50.20:518,50,0
chr10	83296457	.	CAA	C	4915.50	PASS	AB=0.571;AC=19;AF=0.339;AN=56;BaseQRankSum=13.861;DP=655;FS=13.256;HRun=13;HaplotypeScore=127.0693;InbreedingCoeff=0.9125;MQ=64.01;MQ0=8;MQRankSum=0.164;QD=19.51;ReadPosRankSum=3.278;VQSLOD=2.6222;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,29:38:80.76:778,81,0	0/0:7,0:7:18.05:0,18,245	0/0:37,0:21:26.17:0,26,239	0/0:12,0:9:10.26:0,10,104	0/0:26,0:31:79.66:0,80,939	0/0:23,0:26:67.96:0,68,798	1/1:8,14:20:25.76:257,26,0	1/1:8,19:26:50.47:472,50,0	0/0:14,0:16:32.22:0,32,543	0/0:19,0:23:53.50:0,54,659	0/0:18,0:20:55.08:0,55,705	0/0:22,0:23:57.08:0,57,728	0/0:19,0:19:48.58:0,49,622	0/0:16,1:19:18.47:0,18,492	0/0:19,0:20:41.43:0,41,499	0/0:26,0:26:68.66:0,69,906	0/0:22,0:22:52.94:0,53,692	1/1:6,18:24:53.99:523,54,0	1/1:7,14:18:38.68:366,39,0	1/1:4,18:22:47.69:452,48,0	1/1:3,9:12:26.96:255,27,0	0/0:18,0:21:38.62:0,39,610	0/0:18,0:20:41.07:0,41,501	0/0:25,0:25:59.63:0,60,772	0/0:27,0:32:89.73:0,90,1143	0/1:7,21:26:15.81:535,0,16	1/1:5,39:43:99:1046,108,0	1/1:1,12:12:24.04:233,24,0
chr10	83297990	.	TGACA	T	7448.59	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=12.761;DP=546;FS=0.764;HRun=0;HaplotypeScore=94.7260;InbreedingCoeff=0.9896;MQ=80.91;MQ0=0;MQRankSum=-5.090;QD=35.64;ReadPosRankSum=1.496;VQSLOD=4.7670;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,34:41:84.29:1483,84,0	0/0:6,0:6:15.05:0,15,359	0/0:14,0:14:30.10:0,30,695	0/0:21,0:20:47.83:0,48,930	0/0:20,0:20:48.16:0,48,1194	0/0:14,0:14:39.12:0,39,949	1/1:6,20:26:42.14:742,42,0	1/1:9,20:29:60.16:971,60,0	0/0:16,0:16:42.14:0,42,1028	0/0:7,0:7:21.07:0,21,512	0/0:12,0:12:30.10:0,30,769	0/0:26,0:26:72.23:0,72,1794	0/0:23,0:23:63.20:0,63,1528	0/0:20,0:20:60.21:0,60,1505	0/0:14,0:14:39.13:0,39,997	0/0:23,0:23:66.21:0,66,1616	0/0:35,0:35:99:0,102,2437	1/1:5,23:28:63.22:1110,63,0	1/1:4,10:14:30.08:493,30,0	1/1:1,6:7:12.04:212,12,0	1/1:4,30:34:75.17:1287,75,0	0/0:17,0:17:42.14:0,42,1078	0/0:13,0:13:33.11:0,33,845	0/0:39,0:39:99:0,108,2576	0/0:17,0:17:33.11:0,33,847	1/1:2,6:8:18.06:318,18,0	1/1:3,12:15:30.10:516,30,0	1/1:0,7:7:18.06:318,18,0
chr10	83304150	.	GAGA	G	5357.41	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.799;DP=624;FS=0.000;HRun=0;HaplotypeScore=92.7234;InbreedingCoeff=0.9874;MQ=71.09;MQ0=0;MQRankSum=-5.023;QD=36.20;ReadPosRankSum=-1.505;VQSLOD=5.0843;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,2135	0/0:10,0:10:27.09:0,27,583	0/0:21,0:20:50.81:0,51,942	0/0:12,0:12:21.06:0,21,357	0/0:13,0:13:33.04:0,33,674	0/0:16,0:16:45.15:0,45,974	0/0:31,0:31:78.27:0,78,1685	1/1:4,18:22:54.13:775,54,0	0/0:22,0:22:54.17:0,54,1122	0/0:22,0:22:63.22:0,63,1314	0/0:11,0:11:27.09:0,27,581	0/0:30,0:30:87.30:0,87,1884	0/0:28,0:28:66.23:0,66,1408	0/0:39,0:39:99:0,117,2501	0/0:18,0:18:45.15:0,45,970	0/0:22,0:22:60.21:0,60,1298	0/0:33,0:33:93.32:0,93,1961	0/0:32,0:32:81.28:0,81,1722	1/1:2,24:26:72.24:1119,72,0	1/1:1,16:17:45.15:704,45,0	1/1:5,34:39:78.22:1193,78,0	0/0:16,0:16:45.15:0,45,974	0/0:7,0:7:21.06:0,21,405	0/0:35,0:34:96.33:0,96,2079	0/0:24,0:24:63.22:0,63,1362	1/1:5,20:25:60.17:910,60,0	1/1:1,13:14:33.07:516,33,0	1/1:2,3:5:9.03:141,9,0
chr10	83305193	.	CGAT	C	927.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.068;DP=669;FS=5.862;HRun=0;HaplotypeScore=90.7715;InbreedingCoeff=0.9433;MQ=83.74;MQ0=0;MQRankSum=-2.422;QD=40.31;ReadPosRankSum=-2.069;VQSLOD=3.8770;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,3225	0/0:3,0:3:9.03:0,9,205	0/0:26,0:26:78.25:0,78,1693	0/0:20,0:20:48.10:0,48,1020	0/0:23,0:23:66.23:0,66,1520	0/0:17,0:17:45.15:0,45,1038	1/1:1,22:23:60.21:1022,60,0	0/0:26,0:26:72.25:0,72,1664	0/0:23,0:23:66.23:0,66,1475	0/0:22,0:22:60.20:0,60,1320	0/0:20,0:20:60.21:0,60,1382	0/0:28,0:28:81.28:0,81,1846	0/0:28,0:28:81.28:0,81,1845	0/0:14,0:14:42.14:0,42,969	0/0:27,0:27:81.26:0,81,1799	0/0:30,0:30:87.28:0,87,1961	0/0:45,0:45:99:0,132,3043	0/0:21,0:21:57.20:0,57,1292	0/0:9,0:9:27.09:0,27,603	0/0:27,0:27:81.28:0,81,1857	0/0:42,0:42:99:0,123,2836	0/0:23,0:23:69.24:0,69,1569	0/0:14,0:14:36.12:0,36,809	0/0:30,0:30:90.29:0,90,2030	0/0:21,0:21:63.22:0,63,1453	0/0:29,0:29:87.30:0,87,1964	0/0:20,0:20:60.21:0,60,1358	0/0:9,0:9:27.09:0,27,623
chr10	83307019	.	TG	T	2136.69	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=11.580;DP=671;FS=4.638;HRun=1;HaplotypeScore=72.7924;InbreedingCoeff=0.9831;MQ=68.65;MQ0=0;MQRankSum=-1.627;QD=30.09;ReadPosRankSum=1.940;VQSLOD=3.3904;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,42:43:99:1324,102,0	0/0:9,0:9:24.08:0,24,383	0/0:32,0:31:86.45:0,86,1358	0/0:29,0:29:72.63:0,73,1099	0/0:21,0:21:63.21:0,63,1005	0/0:19,0:18:57.17:0,57,885	1/1:1,27:28:72.23:934,72,0	0/0:38,0:38:99:0,114,1800	0/0:22,0:22:66.23:0,66,1055	0/0:29,0:29:87.29:0,87,1359	0/0:17,0:17:51.17:0,51,813	0/0:28,0:28:84.27:0,84,1319	0/0:21,0:21:57.18:0,57,888	0/0:20,0:20:60.20:0,60,957	0/0:26,0:26:78.25:0,78,1223	0/0:33,0:33:99:0,99,1553	0/0:27,0:27:81.26:0,81,1264	0/0:36,0:36:99:0,108,1659	0/0:22,0:22:66.19:0,66,1006	0/0:15,0:15:45.15:0,45,719	0/0:37,0:37:99:0,111,1743	0/0:13,0:13:36.12:0,36,575	0/0:16,0:16:48.16:0,48,764	0/0:23,0:23:66.21:0,66,1032	0/0:19,0:19:57.18:0,57,888	0/0:24,0:24:72.23:0,72,1106	0/0:20,0:20:57.19:0,57,904	0/0:4,0:4:12:0,12,139
chr10	83307611	.	T	TA	4349.97	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-13.771;DP=695;FS=2.699;HRun=6;HaplotypeScore=63.1559;InbreedingCoeff=0.9999;MQ=77.54;MQ0=0;MQRankSum=-0.042;QD=32.46;ReadPosRankSum=-2.937;VQSLOD=4.1830;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1053	0/0:12,0:12:36.05:0,36,357	0/0:24,0:24:50.89:0,51,513	0/0:20,0:18:51.06:0,51,495	0/0:33,0:33:90.20:0,90,918	0/0:20,0:20:54.11:0,54,544	0/0:21,0:21:60.13:0,60,612	1/1:5,34:39:99:1231,99,0	0/0:20,0:20:51.11:0,51,520	0/0:26,0:26:66.14:0,66,670	0/0:23,0:23:60.05:0,60,590	0/0:20,0:20:54.12:0,54,551	0/0:16,0:16:48.11:0,48,489	0/0:26,0:26:69.16:0,69,704	0/0:29,0:29:72.15:0,72,734	0/0:33,0:33:90.18:0,90,910	0/0:26,0:26:69.15:0,69,703	0/0:24,0:23:69.09:0,69,684	1/1:2,20:22:60.18:742,60,0	1/1:3,23:26:66.21:830,66,0	1/1:1,18:19:54.17:679,54,0	0/0:27,0:27:78.17:0,78,791	0/0:26,0:26:66.14:0,66,673	0/0:24,0:24:63.05:0,63,614	0/0:28,0:28:78.17:0,78,795	0/0:35,0:35:93.20:0,93,944	1/1:3,25:28:69.22:867,69,0	0/0:11,0:11:33.08:0,33,337
chr10	83308069	.	AG	A	611.74	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.332;DP=636;FS=0.000;HRun=3;HaplotypeScore=66.4397;InbreedingCoeff=0.9942;MQ=86.43;MQ0=0;MQRankSum=-3.615;QD=30.59;ReadPosRankSum=0.972;VQSLOD=3.4200;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.07:0,78,1014	0/0:8,0:8:24.07:0,24,328	0/0:19,0:19:54.18:0,54,763	0/0:23,0:23:62.85:0,63,838	0/0:11,0:11:32.98:0,33,371	0/0:23,0:23:63.15:0,63,820	0/0:24,0:24:66.22:0,66,951	0/0:23,0:23:60.15:0,60,793	0/0:36,0:36:99:0,108,1536	0/0:16,0:16:48.14:0,48,643	0/0:12,0:12:36.12:0,36,506	0/0:38,0:38:99:0,108,1490	0/0:30,0:30:87.29:0,87,1253	0/0:25,0:25:75.24:0,75,1063	0/0:41,0:41:99:0,123,1752	0/0:36,0:36:99:0,102,1469	0/0:19,0:19:57.19:0,57,820	1/1:0,20:20:57.18:707,57,0	0/0:20,0:20:54.04:0,54,709	0/0:15,0:15:33.02:0,33,413	0/0:42,0:42:99:0,117,1550	0/0:15,0:15:38.41:0,38,447	0/0:9,0:9:27.06:0,27,349	0/0:22,0:22:66.15:0,66,891	0/0:20,0:20:51.14:0,51,681	0/0:21,0:21:51.13:0,51,673	0/0:27,0:26:81.27:0,81,1163	0/0:11,0:11:24.06:0,24,324
chr10	83309637	.	GGT	G	246.08	PASS	AB=0.970;AC=16;AF=0.308;AN=52;BaseQRankSum=2.504;DP=659;FS=11.029;HRun=0;HaplotypeScore=81.9050;InbreedingCoeff=0.1674;MQ=67.94;MQ0=9;MQRankSum=-0.140;QD=0.82;ReadPosRankSum=0.974;VQSLOD=0.8777;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:40:15.35:119,15,0	0/0:8,0:8:15:0,15,175	./.	./.	0/1:19,1:20:23.07:23,0,59	0/0:19,0:17:15.05:0,15,206	0/0:28,0:28:1.81:0,2,5	0/0:32,0:30:3.79:0,4,18	0/1:24,0:23:1.73:2,0,202	0/1:22,0:22:17.94:39,0,18	0/0:8,0:8:3.01:0,3,44	0/1:22,1:22:3.01:87,0,3	0/0:17,0:17:5.59:0,6,33	0/0:24,0:24:14.78:0,15,182	0/1:22,4:26:20.11:20,0,92	0/0:27,0:27:14.99:0,15,172	0/0:23,0:23:14.90:0,15,146	1/1:13,0:16:5.66:28,6,0	0/0:23,0:22:6:0,6,52	0/1:17,0:17:23.04:23,0,63	0/1:49,1:49:1.71:2,0,115	0/0:21,0:22:17.74:0,18,159	0/0:11,0:11:12.04:0,12,171	0/0:46,5:51:9.67:0,10,414	0/1:16,0:16:9.44:9,0,126	1/1:20,0:27:3.31:15,3,0	0/0:14,0:14:3:0,3,25	1/1:12,0:18:5.68:28,6,0
chr10	83310425	.	T	TCA	1738.66	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.426;DP=664;FS=2.202;HRun=0;HaplotypeScore=77.7950;InbreedingCoeff=0.9906;MQ=75.31;MQ0=0;MQRankSum=-2.695;QD=40.43;ReadPosRankSum=2.212;VQSLOD=5.3559;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,1852	0/0:10,0:10:21.07:0,21,294	0/0:14,0:13:24.07:0,24,311	0/0:19,0:19:37.63:0,38,514	0/0:18,0:18:51.13:0,51,663	0/0:18,0:18:51.17:0,51,713	0/0:20,0:20:57.18:0,57,779	0/0:34,0:34:87.28:0,87,1187	0/0:16,0:16:45.15:0,45,630	0/0:24,0:24:66.22:0,66,923	0/0:8,0:8:24.08:0,24,336	0/0:34,0:34:96.30:0,96,1311	0/0:24,0:24:72.21:0,72,971	0/0:20,0:20:54.14:0,54,719	0/0:34,0:34:96.31:0,96,1327	0/0:26,0:26:75.24:0,75,1033	0/0:36,0:36:96.30:0,96,1323	1/1:3,39:43:99:1834,102,0	0/0:30,0:30:81.24:0,81,1086	0/0:14,0:14:33.10:0,33,446	0/0:46,0:46:99:0,132,1830	0/0:15,0:15:45.15:0,45,629	0/0:11,0:11:30.10:0,30,420	0/0:25,0:25:69.23:0,69,964	0/0:18,0:18:54.16:0,54,733	0/0:24,0:24:69.23:0,69,966	0/0:24,0:24:66.20:0,66,906	0/0:10,0:10:30.10:0,30,420
chr10	83311918	.	CGCTGCT	C	223.52	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.575;DP=535;FS=2.726;HRun=0;HaplotypeScore=107.6987;InbreedingCoeff=0.8394;MQ=68.77;MQ0=2;MQRankSum=0.892;QD=9.31;ReadPosRankSum=-0.629;VQSLOD=2.4886;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:48.08:0,48,832	0/0:3,0:3:6.02:0,6,146	0/0:28,0:25:45.13:0,45,1184	0/0:15,0:13:29.13:0,29,768	0/0:10,0:10:15.04:0,15,230	0/0:15,0:15:27.05:0,27,466	0/0:26,0:26:72.22:0,72,2127	0/0:26,0:26:51.12:0,51,928	0/0:18,0:19:48.10:0,48,1363	0/0:18,0:18:24.01:0,24,417	0/0:11,0:11:12:0,12,146	0/0:23,0:23:60.16:0,60,1908	0/0:19,0:19:51.16:0,51,1515	0/0:14,0:14:30.10:0,30,929	0/0:26,0:26:63.19:0,63,1881	0/0:17,0:17:42.13:0,42,1299	0/0:37,0:37:84.20:0,84,2440	0/0:30,0:30:78.18:0,78,2146	0/0:20,0:20:39.02:0,39,526	0/0:8,0:8:12:0,12,107	0/0:17,0:17:45.12:0,45,995	0/0:16,0:16:27.05:0,27,441	0/0:8,0:8:11.99:0,12,102	0/0:39,0:39:90.25:0,90,2506	0/0:16,0:16:27.07:0,27,436	1/1:10,9:19:23.01:206,23,0	0/0:21,0:21:45.14:0,45,1300	1/1:0,5:5:6.02:128,6,0
chr10	83312617	.	T	TACAGGTCTAAGGGA	23993.02	PASS	AB=0.763;AC=14;AF=0.250;AN=56;BaseQRankSum=-6.495;DP=736;FS=14.797;HRun=0;HaplotypeScore=256.1067;InbreedingCoeff=0.7771;MQ=78.88;MQ0=0;MQRankSum=-14.849;QD=113.71;ReadPosRankSum=-3.305;VQSLOD=3.0749;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,4932	0/0:12,0:12:36.12:0,36,1507	0/0:23,0:23:66.18:0,66,2202	0/0:20,0:20:57.15:0,57,1989	0/1:31,1:32:99:119,0,3661	0/0:22,0:22:66.23:0,66,2894	0/0:29,0:29:87.28:0,87,3715	1/1:17,6:42:99:5484,120,0	0/0:32,0:32:96.33:0,96,4090	0/0:33,0:33:93.31:0,93,3944	0/0:22,0:22:66.23:0,66,2773	0/0:26,0:26:78.25:0,78,3243	0/0:36,0:36:99:0,105,4195	0/0:21,0:21:60.21:0,60,2539	0/0:31,0:31:93.30:0,93,3572	0/0:35,0:35:99:0,105,4344	0/0:29,0:29:87.30:0,87,3562	0/0:15,0:15:42.08:0,42,1590	1/1:4,4:15:41.97:1529,42,0	1/1:7,8:29:51.18:2543,51,0	1/1:4,8:18:36.12:1726,36,0	0/0:26,0:26:75.24:0,75,2940	0/0:21,0:21:63.16:0,63,2349	0/0:29,0:29:87.28:0,87,3623	0/0:22,0:22:66.23:0,66,2683	0/1:8,20:39:15.47:6864,0,15	1/1:6,21:35:81.28:5512,81,0	1/1:0,1:1:3.01:216,3,0
chr10	83312925	.	G	GA	369.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.718;DP=611;FS=0.947;HRun=9;HaplotypeScore=63.9293;InbreedingCoeff=0.7668;MQ=69.07;MQ0=0;MQRankSum=0.084;QD=20.55;ReadPosRankSum=0.599;VQSLOD=4.1804;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:81.11:0,81,695	0/0:11,0:11:29.95:0,30,253	0/0:14,0:14:26.21:0,26,216	0/0:13,0:13:5.72:0,6,138	0/0:23,0:23:56.98:0,57,495	0/0:21,0:22:56.02:0,56,475	0/0:12,0:12:29.99:0,30,260	0/0:38,0:39:94.99:0,95,813	0/0:19,0:19:53.99:0,54,469	0/0:40,0:40:83.93:0,84,724	0/0:30,0:31:77:0,77,657	0/0:11,0:11:26.03:0,26,214	0/0:14,1:15:8.79:0,9,302	0/0:22,0:22:50.97:0,51,443	0/0:10,0:10:26.97:0,27,230	0/0:20,0:20:53.98:0,54,469	0/0:25,0:25:65:0,65,553	1/1:1,17:18:42.11:465,42,0	0/0:20,0:20:53.97:0,54,464	0/0:32,0:32:62.93:0,63,543	0/0:10,0:10:26.99:0,27,234	0/0:30,0:30:68.96:0,69,599	0/0:22,1:23:14.79:0,15,357	0/0:12,0:12:35.95:0,36,305	0/0:30,0:30:74.98:0,75,651	0/0:35,0:35:86.95:0,87,751	0/0:34,0:34:95.97:0,96,833	0/0:2,0:2:5.99:0,6,50
chr10	83313002	.	A	AAAG	4466.12	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-11.192;DP=561;FS=5.163;HRun=0;HaplotypeScore=76.8894;InbreedingCoeff=0.9977;MQ=73.41;MQ0=0;MQRankSum=-1.120;QD=42.13;ReadPosRankSum=-0.371;VQSLOD=6.0060;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:93.31:0,93,1395	0/0:12,0:12:36.12:0,36,542	0/0:16,0:16:24.04:0,24,327	0/0:14,0:13:20.66:0,21,274	0/0:24,0:24:63.10:0,63,852	0/0:28,0:28:72.14:0,72,992	0/0:17,0:17:39.13:0,39,577	1/1:10,14:24:45.14:876,45,0	0/0:20,0:20:42.05:0,42,545	0/0:23,0:23:57.19:0,57,854	0/0:23,0:23:57.18:0,57,835	0/0:17,0:17:42.14:0,42,632	0/0:17,0:17:48.15:0,48,704	0/0:10,0:10:27.09:0,27,406	0/0:10,0:10:27.09:0,27,407	0/0:20,0:20:51.17:0,51,768	0/0:28,0:27:66.22:0,66,994	0/0:15,0:15:36.12:0,36,542	1/1:8,12:20:45.12:896,45,0	1/1:3,21:25:60.21:1243,60,0	1/1:2,10:12:27.09:569,27,0	0/0:27,0:27:60.20:0,60,903	0/0:18,0:18:48.16:0,48,722	0/0:15,0:15:45.15:0,45,673	0/0:20,0:20:57.19:0,57,858	0/0:30,0:30:72.24:0,72,1084	1/1:7,15:23:42.14:884,42,0	0/0:14,0:14:42.14:0,42,632
chr10	83314093	.	AT	A	2995.27	PASS	AB=0.820;AC=17;AF=0.304;AN=56;BaseQRankSum=11.318;DP=513;FS=8.379;HRun=11;HaplotypeScore=50.0392;InbreedingCoeff=0.7150;MQ=68.88;MQ0=0;MQRankSum=0.618;QD=14.13;ReadPosRankSum=0.777;VQSLOD=3.2646;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:32:71.83:584,72,0	0/0:8,0:8:15.04:0,15,160	0/0:8,0:6:7.26:0,7,63	0/1:6,0:6:7.88:8,0,28	0/0:14,1:15:14.41:0,14,331	0/0:29,1:32:53.36:0,53,741	1/1:0,9:9:26.97:222,27,0	1/1:12,20:32:59.89:492,60,0	0/0:14,1:15:17.46:0,17,391	0/1:14,2:16:13.20:13,0,271	0/0:26,1:28:50.34:0,50,710	0/0:17,0:17:39.08:0,39,408	0/0:13,0:13:33.08:0,33,351	0/0:13,0:13:33.07:0,33,344	0/0:19,2:21:29.47:0,29,505	0/0:19,0:19:51.09:0,51,526	0/0:14,0:14:39.08:0,39,408	1/1:4,13:17:32.96:271,33,0	1/1:4,18:23:48.97:380,49,0	0/1:6,18:24:7.07:362,0,7	1/1:3,19:23:50.93:419,51,0	0/0:7,0:8:14.87:0,15,142	0/0:14,1:15:8.43:0,8,289	0/0:17,0:17:42.05:0,42,435	0/0:18,0:18:48.12:0,48,506	0/0:19,0:19:45.07:0,45,457	1/1:10,19:29:53.90:443,54,0	0/0:18,2:21:1.64:0,2,396
chr10	83314262	.	GA	G	4284.68	PASS	AB=0.941;AC=21;AF=0.375;AN=56;BaseQRankSum=12.079;DP=584;FS=9.808;HRun=10;HaplotypeScore=59.1604;InbreedingCoeff=0.9493;MQ=80.66;MQ0=0;MQRankSum=-1.452;QD=18.96;ReadPosRankSum=-1.555;VQSLOD=4.6566;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:68.97:599,69,0	0/0:10,0:11:32.92:0,33,346	0/0:15,1:16:16.73:0,17,173	0/1:15,1:16:1.73:2,0,153	0/0:35,0:35:73.21:0,73,998	0/0:26,0:28:74.87:0,75,791	1/1:1,5:6:14.99:130,15,0	1/1:7,25:32:71.97:625,72,0	0/0:15,0:15:39.11:0,39,431	0/0:30,0:31:75.19:0,75,818	0/0:28,1:30:42.95:0,43,678	0/0:14,0:14:36.09:0,36,391	0/0:13,0:13:30.08:0,30,331	0/0:16,0:16:36.10:0,36,398	0/0:24,0:24:60.14:0,60,648	0/0:24,1:25:49.14:0,49,762	0/0:26,0:27:46.39:0,46,718	1/1:0,11:11:26.99:234,27,0	1/1:4,19:23:26.78:456,27,0	1/1:4,22:26:53.94:469,54,0	1/1:3,11:14:23.99:208,24,0	0/0:18,0:18:48.13:0,48,531	0/0:23,0:23:63.13:0,63,684	0/0:12,0:12:33.09:0,33,365	0/0:19,0:20:60:0,60,645	1/1:3,24:27:71.98:624,72,0	1/1:3,19:22:50.99:443,51,0	1/1:0,21:21:56.99:495,57,0
chr10	83315667	.	GTA	G	153.68	PASS	AC=16;AF=0.800;AN=20;BaseQRankSum=-2.670;DP=30;FS=2.869;HRun=0;HaplotypeScore=16.0595;InbreedingCoeff=0.3384;MQ=90.80;MQ0=1;MQRankSum=-0.938;QD=11.82;ReadPosRankSum=-2.670;VQSLOD=2.4867;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:4,0:1:3.01:0,3,60	0/0:9,0:3:5.98:0,6,63	1/1:1,0:1:3:25,3,0	./.	1/1:2,0:2:2.97:20,3,0	1/1:0,2:2:5.90:37,6,0	./.	1/1:2,0:2:5.84:40,6,0	./.	./.	./.	1/1:1,0:1:3:25,3,0	1/1:2,0:2:5.88:36,6,0	./.	./.	./.	./.	1/1:1,0:1:2.90:16,3,0	./.	./.	./.	./.	./.	1/1:2,0:2:5.93:44,6,0	./.	./.
chr10	83315669	.	A	AG	1904.14	PASS	AB=0.970;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.582;DP=169;FS=8.926;HRun=3;HaplotypeScore=135.4273;InbreedingCoeff=0.0630;MQ=47.99;MQ0=1;MQRankSum=0.159;QD=11.75;ReadPosRankSum=-0.436;VQSLOD=1.2154;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:23.62:183,24,0	1/1:1,0:1:2.74:12,3,0	0/0:7,0:1:3:0,3,27	0/1:9,1:4:13.98:14,0,61	1/1:4,0:4:5.74:37,6,0	1/1:6,0:6:14.72:92,15,0	1/1:6,0:6:3.36:52,3,0	1/1:12,0:12:26.25:238,26,0	1/1:13,0:13:22.60:179,23,0	1/1:8,0:8:15.83:142,16,0	1/1:4,0:4:8.95:67,9,0	1/1:8,0:8:7.82:74,8,0	1/1:2,0:2:5.91:40,6,0	1/1:4,0:4:11.81:79,12,0	1/1:9,0:9:25.27:189,25,0	1/1:5,0:5:7.49:77,7,0	0/1:3,0:3:1.63:20,0,2	1/1:2,0:2:5.91:38,6,0	1/1:1,0:1:3:27,3,0	1/1:4,0:4:3.01:41,3,0	1/1:5,0:5:2.60:10,3,0	1/1:8,0:7:4.24:29,4,0	0/1:6,0:6:3.27:32,0,3	1/1:5,0:5:8.81:55,9,0	1/1:5,0:5:4.25:36,4,0	1/1:4,0:4:9.01:95,9,0	1/1:10,0:10:10.97:110,11,0	1/1:0,4:4:3.01:41,3,0
chr10	83316028	.	ATTTTTTGTT	A	2511.11	PASS	AB=0.588;AC=9;AF=0.161;AN=56;BaseQRankSum=9.053;DP=550;FS=0.000;HRun=0;HaplotypeScore=150.3588;InbreedingCoeff=0.8443;MQ=68.32;MQ0=0;MQRankSum=-5.974;QD=35.87;ReadPosRankSum=-0.108;VQSLOD=2.7600;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:3,7:10:15.24:367,0,15	0/0:6,0:6:15.05:0,15,648	0/0:21,0:15:10.70:0,11,796	0/0:21,0:17:36.26:0,36,1121	0/0:25,0:25:72.19:0,72,2977	0/0:31,0:30:90.29:0,90,3790	1/1:2,11:13:15.05:421,15,0	0/0:38,0:38:93.25:0,93,3533	0/0:22,0:22:60.19:0,60,2451	0/0:18,0:18:48.16:0,48,2001	0/0:13,0:13:36.11:0,36,1426	0/0:17,0:17:42.14:0,42,1723	0/0:12,0:12:30.09:0,30,1223	0/0:22,0:22:60.14:0,60,2397	0/0:36,0:36:96.32:0,96,4169	0/0:22,0:22:66.23:0,66,2959	0/0:21,0:21:53.92:0,54,2091	1/1:4,10:14:12.04:321,12,0	0/0:20,0:19:45.15:0,45,1862	0/0:16,0:16:39.13:0,39,1819	0/0:19,0:19:45.14:0,45,1813	0/0:21,0:21:48.16:0,48,2006	0/0:16,0:16:42.14:0,42,1824	0/0:12,0:12:27.09:0,27,1260	0/0:12,0:12:36.08:0,36,1522	1/1:3,17:20:45.11:974,45,0	0/0:39,0:39:96.33:0,96,4284	1/1:4,9:13:21.06:588,21,0
chr10	83316565	.	A	AAAT	696.24	PASS	AC=4;AF=0.100;AN=40;BaseQRankSum=-4.156;DP=173;FS=1.271;HRun=0;HaplotypeScore=29.0665;InbreedingCoeff=0.3243;MQ=73.42;MQ0=0;MQRankSum=2.686;QD=25.79;ReadPosRankSum=0.334;VQSLOD=3.2411;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:11:6.84:0,7,44	0/0:2,0:2:6.02:0,6,78	./.	./.	0/0:5,0:5:9.03:0,9,117	0/0:9,0:9:3.01:0,3,39	0/0:3,0:4:2.98:0,3,21	0/0:23,0:23:0.47:0,0,1	0/0:6,0:8:5.95:0,6,42	0/0:5,0:5:3.01:0,3,39	0/0:1,0:1:3.01:0,3,39	./.	0/0:8,0:12:5.95:0,6,42	0/0:4,0:5:2.97:0,3,20	./.	0/0:6,0:6:3.01:0,3,39	1/1:4,6:11:15.05:285,15,0	1/1:4,11:16:28.65:516,29,0	0/0:6,0:6:0.47:0,0,1	./.	0/0:5,0:5:3.01:0,3,39	./.	./.	0/0:1,0:2:2.98:0,3,21	0/0:6,0:6:2.29:0,2,38	0/0:2,0:3:5.99:0,6,60	0/0:4,0:8:2.98:0,3,21	./.
chr10	83317282	.	AT	A	3930.65	PASS	AB=0.759;AC=14;AF=0.250;AN=56;BaseQRankSum=12.489;DP=654;FS=6.439;HRun=9;HaplotypeScore=67.7023;InbreedingCoeff=0.7727;MQ=75.57;MQ0=0;MQRankSum=-0.530;QD=19.75;ReadPosRankSum=-2.909;VQSLOD=2.9807;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.13:0,63,702	0/0:10,1:11:5.61:0,6,299	0/1:22,1:22:5.18:5,0,377	0/0:19,0:15:6.32:0,6,321	0/0:37,1:39:74.83:0,75,1067	0/0:22,0:22:57.17:0,57,658	0/0:17,0:17:45.12:0,45,510	1/1:7,25:33:77.02:678,77,0	0/0:23,0:23:66.16:0,66,737	0/0:38,0:38:99:0,111,1271	0/0:27,0:27:72.20:0,72,822	0/0:18,0:18:51.14:0,51,580	0/0:13,0:13:33.10:0,33,381	0/0:22,0:22:60.17:0,60,682	0/0:22,0:22:63.17:0,63,716	0/0:27,0:27:78.17:0,78,867	0/0:25,0:25:66.18:0,66,753	0/0:24,0:24:66.16:0,66,739	1/1:2,25:27:77.96:688,78,0	1/1:3,25:28:68.97:623,69,0	1/1:3,12:15:33.02:302,33,0	0/0:23,0:23:63.02:0,63,707	0/0:20,3:23:5.25:0,5,568	0/0:14,1:15:14.65:0,15,413	0/0:22,1:22:38.64:0,39,665	0/1:6,22:28:28.96:509,0,29	1/1:1,30:31:90.05:824,90,0	1/1:1,13:14:33.02:302,33,0
chr10	83317514	.	A	ACCCCAGTCCTC	26367.30	PASS	AB=0.585;AC=19;AF=0.339;AN=56;BaseQRankSum=-5.034;DP=613;FS=3.299;HRun=0;HaplotypeScore=176.9208;InbreedingCoeff=0.9165;MQ=84.03;MQ0=0;MQRankSum=-16.316;QD=115.65;ReadPosRankSum=-2.550;VQSLOD=4.4517;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,10:28:57.20:2702,57,0	0/0:10,0:10:30.09:0,30,1005	0/0:28,0:28:81.28:0,81,2637	0/0:17,0:17:51.17:0,51,1568	0/0:33,0:33:92.40:0,92,3205	0/0:23,0:23:69.24:0,69,2464	1/1:8,9:20:48.16:2389,48,0	1/1:30,10:44:99:5670,129,0	0/0:24,0:24:72.25:0,72,2366	0/0:29,0:29:87.28:0,87,2857	0/0:17,0:17:42.13:0,42,1348	0/0:13,0:13:39.13:0,39,1343	0/0:15,0:15:45.15:0,45,1621	0/0:27,0:27:78.23:0,78,2483	0/0:22,0:22:63.22:0,63,2137	0/0:18,0:18:54.17:0,54,1817	0/0:23,0:23:69.21:0,69,2334	1/1:4,3:8:18.06:857,18,0	1/1:8,3:14:39.13:1797,39,0	1/1:10,14:32:54.18:2900,54,0	1/1:0,7:7:15.05:814,15,0	0/0:25,0:25:72.23:0,72,2500	0/0:24,0:24:72.23:0,72,2451	0/0:12,0:12:36.12:0,36,1306	0/0:25,0:25:75.24:0,75,2635	0/1:7,9:24:35.58:2682,0,36	1/1:8,24:40:87.30:4674,87,0	1/1:4,7:11:33.11:1883,33,0
chr10	83318650	.	T	TTCAGTTTGGTCC	6981.22	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=4.051;DP=648;FS=2.493;HRun=0;HaplotypeScore=204.7718;InbreedingCoeff=0.9425;MQ=84.69;MQ0=1;MQRankSum=-8.648;QD=47.17;ReadPosRankSum=-5.620;VQSLOD=3.5720;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.25:0,78,2635	0/0:13,0:13:30.10:0,30,1069	0/0:42,0:31:38.45:0,38,1105	0/0:64,0:36:61.63:0,62,1451	0/0:23,0:23:48.14:0,48,1454	0/0:23,0:23:57.20:0,57,2000	0/0:20,0:20:45.13:0,45,1379	1/1:40,0:40:48.10:1920,48,0	0/0:20,0:20:51.11:0,51,1675	0/0:25,0:25:60.20:0,60,1935	0/0:21,0:21:48.16:0,48,1713	0/0:23,0:23:42.14:0,42,1399	0/0:16,0:16:39.12:0,39,1244	0/0:16,0:16:39.12:0,39,1289	0/0:19,0:19:54.15:0,54,1664	0/0:14,0:14:39.11:0,39,1221	0/0:16,0:16:39.11:0,39,1139	0/0:19,0:19:48.11:0,48,1489	1/1:20,0:20:33.10:1037,33,0	1/1:22,0:22:31.35:948,31,0	1/1:12,0:11:6.49:147,6,0	0/0:25,0:25:60.21:0,60,2090	0/0:27,0:27:60.18:0,60,1886	0/0:21,0:21:45.15:0,45,1506	0/0:19,0:19:42.14:0,42,1415	1/1:17,10:27:48.16:2259,48,0	1/1:24,0:24:6.02:318,6,0	1/1:0,2:3:6.02:353,6,0
chr10	83318661	.	C	CCTCAGTTTGGTT	11421.92	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=3.945;DP=672;FS=23.272;HRun=0;HaplotypeScore=192.8459;InbreedingCoeff=0.9676;MQ=74.68;MQ0=14;MQRankSum=-11.365;QD=76.66;ReadPosRankSum=-5.916;VQSLOD=2.2326;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.25:0,81,2788	0/0:13,0:13:33.08:0,33,1142	0/0:60,0:27:43.32:0,43,1265	0/0:86,0:31:76.15:0,76,1733	0/0:22,0:22:51.15:0,51,1563	0/0:23,0:23:66.18:0,66,2194	0/0:21,0:21:50.44:0,50,1489	1/1:38,0:38:99:4237,102,0	0/0:18,0:18:51.17:0,51,1798	0/0:21,0:21:60.19:0,60,2062	0/0:17,0:17:48.16:0,48,1795	0/0:21,0:21:48.03:0,48,1517	0/0:14,0:14:42.11:0,42,1375	0/0:17,0:17:42.12:0,42,1373	0/0:21,0:21:54.17:0,54,1793	0/0:13,0:13:39.13:0,39,1340	0/0:20,0:20:48.10:0,48,1289	0/0:21,0:21:57:0,57,1659	1/1:15,0:15:42.11:1567,42,0	1/1:24,0:24:57.07:1762,57,0	1/1:2,7:17:9.03:259,9,0	0/0:24,0:24:60.12:0,60,2202	0/0:22,0:22:66.19:0,66,2071	0/0:22,0:22:45.15:0,45,1600	0/0:16,0:16:42.14:0,42,1515	1/1:22,0:22:36.22:2622,36,0	1/1:6,17:28:16.76:663,17,0	1/1:4,0:4:5.97:312,6,0
chr10	83318664	.	CTG	C	456	PASS	AB=0.913;AC=7;AF=0.125;AN=56;BaseQRankSum=7.671;DP=628;FS=0.000;HRun=0;HaplotypeScore=86.4487;InbreedingCoeff=0.2101;MQ=74.78;MQ0=16;MQRankSum=-4.668;QD=5.49;ReadPosRankSum=-2.362;VQSLOD=1.8319;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:81.26:0,81,1562	0/0:13,0:13:32.78:0,33,662	0/0:58,0:25:51.98:0,52,1013	0/0:86,0:31:76.26:0,76,1231	0/0:20,0:20:54.15:0,54,1016	0/0:23,0:23:66:0,66,1330	0/0:21,0:21:50.51:0,51,911	0/1:18,3:21:42.10:42,0,842	0/0:17,0:17:51.17:0,51,994	0/0:21,0:21:63.20:0,63,1192	0/0:17,0:16:48.16:0,48,965	0/0:20,0:20:48.16:0,48,903	0/0:15,0:15:42.13:0,42,813	0/0:17,0:17:42.13:0,42,811	0/0:20,0:20:54.17:0,54,1029	0/0:14,0:14:39.13:0,39,774	0/0:21,0:21:51.15:0,51,975	0/0:22,0:21:62.95:0,63,1098	0/1:5,0:11:99:156,0,265	0/1:10,8:18:99:245,0,149	1/1:15,0:14:3.01:36,3,0	0/0:23,0:23:60.21:0,60,1201	0/0:22,0:22:66.21:0,66,1288	0/0:22,0:22:51.17:0,51,1001	0/0:17,0:17:42.14:0,42,845	0/1:14,0:14:48.18:48,0,373	0/0:24,0:24:8.88:0,9,48	0/1:4,0:4:0.61:55,0,1
chr10	83318668	.	GTCTCTCTCTC	G	161.94	PASS	AB=0.833;AC=3;AF=0.063;AN=48;BaseQRankSum=1.867;DP=672;FS=2.418;HRun=0;HaplotypeScore=164.5744;InbreedingCoeff=0.2537;MQ=70.21;MQ0=22;MQRankSum=-1.465;QD=4.05;ReadPosRankSum=-0.584;VQSLOD=2.7130;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:9.98:0,10,270	0/0:15,0:15:3.01:0,3,106	./.	./.	0/0:22,0:22:2.99:0,3,24	0/0:25,0:24:9.01:0,9,123	0/1:16,4:20:11.01:80,0,11	0/0:23,0:23:6.38:0,6,52	0/0:18,0:19:14.50:0,15,155	0/0:24,0:23:18.67:0,19,466	./.	1/1:15,5:20:1.86:170,2,0	0/0:14,0:14:9.02:0,9,166	0/0:15,0:17:15.02:0,15,200	0/0:25,0:25:15.03:0,15,427	0/0:15,0:15:15.05:0,15,565	0/0:19,0:19:18.06:0,18,556	0/0:23,0:22:18.03:0,18,310	0/0:13,0:13:4.81:0,5,29	./.	0/0:17,0:15:0:0,0,0	0/0:25,0:25:11.99:0,12,122	0/0:21,0:21:8.95:0,9,156	0/0:27,0:27:18.04:0,18,509	0/0:20,0:20:3.01:0,3,51	0/0:18,0:18:19.82:0,20,356	0/0:26,0:26:9.02:0,9,139	0/0:7,0:6:1.82:0,2,5
chr10	83320110	.	TA	T	1566.94	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.832;DP=405;FS=4.162;HRun=12;HaplotypeScore=44.1478;InbreedingCoeff=0.8924;MQ=63.35;MQ0=5;MQRankSum=0.409;QD=12.05;ReadPosRankSum=1.256;VQSLOD=3.1076;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.05:0,45,442	0/0:9,0:9:18.02:0,18,176	0/0:9,0:2:5.98:0,6,46	0/0:9,0:4:2.50:0,2,9	0/0:15,0:15:32.99:0,33,318	0/0:17,0:17:39.05:0,39,388	0/0:8,0:8:24.01:0,24,233	1/1:7,27:34:77.60:593,78,0	0/0:5,0:5:15.03:0,15,152	0/0:21,0:21:45.09:0,45,457	0/0:16,0:18:30.02:0,30,352	0/0:15,0:15:36.05:0,36,354	0/0:5,0:5:12.02:0,12,122	0/0:10,0:11:20.88:0,21,196	0/0:11,0:11:33.02:0,33,318	0/0:11,0:11:29.43:0,29,283	0/0:28,0:27:69.12:0,69,694	1/1:6,0:23:13.11:64,13,0	1/1:4,19:24:34.60:390,35,0	1/1:2,17:20:44.68:336,45,0	1/1:1,3:4:8.96:70,9,0	0/0:7,0:7:11.99:0,12,104	0/0:10,0:10:14.97:0,15,140	0/0:4,0:4:8.92:0,9,85	0/0:14,1:16:24.17:0,24,376	0/0:20,0:20:51.04:0,51,504	1/1:7,18:25:14.25:294,14,0	0/0:8,0:8:24.05:0,24,244
chr10	83320221	.	CAG	C	250.49	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.037;DP=499;FS=10.048;HRun=0;HaplotypeScore=65.1454;InbreedingCoeff=0.9885;MQ=80.17;MQ0=0;MQRankSum=-3.341;QD=20.87;ReadPosRankSum=0.587;VQSLOD=3.3640;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:79.43:0,79,1513	0/0:8,0:8:24.08:0,24,440	0/0:23,0:22:60.21:0,60,1074	0/0:26,0:26:70.76:0,71,1198	0/0:22,0:22:60.19:0,60,1054	0/0:16,0:16:45.15:0,45,825	0/0:17,0:17:48.13:0,48,816	0/0:29,0:29:81.28:0,81,1474	0/0:12,0:12:36.12:0,36,652	0/0:19,0:19:54.19:0,54,988	0/0:13,0:13:36.12:0,36,653	0/0:21,0:21:57.15:0,57,1002	0/0:16,0:16:45.14:0,45,773	0/0:10,0:10:30.10:0,30,550	0/0:26,0:26:78.27:0,78,1422	0/0:13,0:13:36.12:0,36,657	0/0:31,0:31:93.32:0,93,1683	1/1:3,9:12:24.08:344,24,0	0/0:15,0:15:45.13:0,45,765	0/0:12,0:12:33.11:0,33,589	0/0:23,0:23:66.23:0,66,1196	0/0:7,0:7:21.07:0,21,384	0/0:9,0:9:24.08:0,24,439	0/0:18,0:18:51.17:0,51,927	0/0:11,0:11:33.11:0,33,604	0/0:20,0:20:57.18:0,57,1014	0/0:25,0:25:72.24:0,72,1279	0/0:13,0:13:39.13:0,39,706
chr10	83320254	.	TCTCTCTCTCTCTCCCTCTCTCC	T	696.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.029;DP=564;FS=0.000;HRun=0;HaplotypeScore=288.1544;InbreedingCoeff=0.8644;MQ=62.21;MQ0=8;MQRankSum=-4.039;QD=63.35;ReadPosRankSum=1.445;VQSLOD=2.1525;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,108,8644	0/0:7,0:7:12.04:0,12,873	0/0:29,0:15:24.04:0,24,834	0/0:47,0:22:33.11:0,33,939	0/0:11,0:11:33.11:0,33,2332	0/0:19,0:19:54.19:0,54,4869	0/0:22,0:22:51.17:0,51,3793	0/0:33,0:33:63.21:0,63,2660	0/0:15,0:15:39.13:0,39,3512	0/0:13,0:13:39.13:0,39,2941	0/0:13,0:13:33.11:0,33,2773	0/0:22,0:22:57.18:0,57,3816	0/0:14,0:14:36.12:0,36,2920	0/0:12,0:12:24.08:0,24,1713	0/0:24,0:24:57.18:0,57,5050	0/0:17,0:17:48.16:0,48,3950	0/0:37,0:37:99:0,99,9170	1/1:4,7:11:18.06:787,18,0	0/0:20,0:20:39.13:0,39,3301	0/0:6,0:6:6.02:0,6,557	0/0:29,0:29:78.25:0,78,6624	0/0:10,0:10:27.09:0,27,2760	0/0:11,0:11:21.07:0,21,1870	0/0:20,0:20:48.16:0,48,3929	0/0:15,0:15:39.03:0,39,3693	0/0:26,0:25:60.10:0,60,4962	0/0:25,0:25:57.19:0,57,4435	0/0:14,0:14:33.07:0,33,2146
chr10	83320487	.	AAAAAC	A	1160.44	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.738;DP=643;FS=6.699;HRun=0;HaplotypeScore=122.6734;InbreedingCoeff=0.8739;MQ=59.77;MQ0=12;MQRankSum=-6.626;QD=40.02;ReadPosRankSum=-1.173;VQSLOD=3.2335;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:81.25:0,81,2113	0/0:10,0:10:24.08:0,24,685	0/0:25,0:12:20.87:0,21,466	0/0:16,0:7:11.49:0,11,197	0/0:27,0:27:72.25:0,72,1930	0/0:15,0:15:42.03:0,42,1036	0/0:24,0:24:57.19:0,57,1480	0/0:34,0:31:69.16:0,69,1590	0/0:24,0:24:60.18:0,60,1540	0/0:26,0:26:63.21:0,63,1508	0/0:23,0:23:57.19:0,57,1518	0/0:25,0:25:60.20:0,60,1553	0/0:15,0:15:42.14:0,42,1138	0/0:15,0:15:27.08:0,27,680	0/0:27,0:27:69.23:0,69,1852	0/0:17,0:17:42.14:0,42,1008	0/0:31,0:31:81.27:0,81,2006	0/0:34,0:34:81.27:0,81,2209	0/0:26,0:24:45.14:0,45,1050	0/0:31,0:30:57.19:0,57,1295	0/0:8,0:8:15.05:0,15,370	0/0:31,0:31:78.27:0,78,2096	0/0:24,0:24:51.17:0,51,1324	0/0:23,0:23:54.14:0,54,1401	0/0:16,0:16:42.14:0,42,1189	1/1:10,18:28:69.23:1213,69,0	0/0:28,0:28:60.20:0,60,1524	1/1:0,1:1:3.01:56,3,0
chr10	83320520	.	C	CAAA	5240.83	PASS	AB=0.547;AC=13;AF=0.232;AN=56;BaseQRankSum=-0.740;DP=630;FS=5.404;HRun=6;HaplotypeScore=91.9779;InbreedingCoeff=0.8582;MQ=57.52;MQ0=8;MQRankSum=-1.889;QD=35.41;ReadPosRankSum=-1.810;VQSLOD=3.2746;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.27:0,93,1316	0/0:11,0:11:33.06:0,33,425	0/0:33,0:21:53.36:0,53,657	0/0:19,0:9:17.64:0,18,246	0/0:31,0:31:84.28:0,84,1230	0/0:15,0:15:42.10:0,42,575	0/0:24,0:24:60.18:0,60,847	0/1:5,24:25:57.34:884,0,57	0/0:18,0:18:51.17:0,51,745	0/0:23,0:23:63.20:0,63,903	0/0:24,0:24:66.20:0,66,952	0/0:24,0:24:66.18:0,66,945	0/0:20,0:20:60.20:0,60,884	0/0:10,0:10:21.07:0,21,308	0/0:25,0:24:66.20:0,66,951	0/0:13,0:13:39.12:0,39,555	0/0:34,0:34:90.26:0,90,1280	0/0:30,0:31:84.17:0,84,1188	1/1:7,23:25:66.19:1235,66,0	1/1:1,20:21:48.09:915,48,0	1/1:1,11:12:15.05:327,15,0	0/0:27,0:27:72.23:0,72,1032	0/0:19,0:19:57.15:0,57,774	0/0:26,0:27:78.24:0,78,1124	0/0:20,0:20:60.19:0,60,864	1/1:3,0:28:82.33:614,82,0	1/1:1,23:27:57.20:1243,57,0	1/1:0,0:1:2.99:23,3,0
chr10	83321418	.	T	TAGAC	10625.02	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-15.368;DP=628;FS=3.655;HRun=0;HaplotypeScore=89.2997;InbreedingCoeff=0.9960;MQ=74.95;MQ0=2;MQRankSum=-2.200;QD=46.60;ReadPosRankSum=-0.319;VQSLOD=5.3519;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,20:26:39.13:974,39,0	0/0:13,0:13:39.09:0,39,584	0/0:23,0:23:39.04:0,39,625	0/0:17,0:17:33.11:0,33,560	0/0:25,0:25:51.17:0,51,861	0/0:26,0:26:72.25:0,72,1216	1/1:10,21:32:54.19:1347,54,0	1/1:10,18:28:54.14:1110,54,0	0/0:37,0:37:93.30:0,93,1544	0/0:35,0:35:90.28:0,90,1428	0/0:12,0:12:33.09:0,33,508	0/0:17,0:17:45.13:0,45,711	0/0:20,0:20:45.14:0,45,732	0/0:25,0:25:66.12:0,66,975	0/0:12,0:12:33.11:0,33,560	0/0:28,0:28:69.21:0,69,1115	0/0:31,0:31:84.23:0,84,1366	1/1:2,9:11:18.06:449,18,0	1/1:1,15:16:42.12:972,42,0	1/1:5,19:23:51.18:1272,51,0	1/1:1,19:22:51.18:1273,51,0	0/0:21,0:21:42.14:0,42,712	0/0:21,0:21:54.18:0,54,916	0/0:20,0:20:48.16:0,48,814	0/0:17,0:17:42.12:0,42,684	1/1:9,23:32:24.34:1601,24,0	1/1:4,21:26:51.01:1252,51,0	1/1:2,7:9:15.05:375,15,0
chr10	83322042	.	G	GC	493.41	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.595;DP=548;FS=0.000;HRun=8;HaplotypeScore=56.9190;InbreedingCoeff=0.9652;MQ=82.81;MQ0=0;MQRankSum=0.339;QD=20.56;ReadPosRankSum=-1.725;VQSLOD=2.9848;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:99:0,108,972	0/0:7,0:7:14.98:0,15,131	0/0:27,0:27:43.35:0,43,395	0/0:14,0:15:16.37:0,16,201	0/0:24,0:24:50.95:0,51,456	0/0:14,0:14:39:0,39,352	0/0:23,0:23:62.95:0,63,572	0/0:15,0:15:35.99:0,36,321	0/0:16,0:16:44.96:0,45,402	0/0:22,0:22:63.03:0,63,577	0/0:13,0:13:32.93:0,33,287	0/0:18,0:18:51.02:0,51,467	0/0:18,0:18:48:0,48,430	0/0:17,0:17:48.03:0,48,438	0/0:24,0:24:69.03:0,69,631	0/0:8,0:8:18.01:0,18,165	0/0:32,0:32:86.99:0,87,784	0/0:16,0:16:45:0,45,407	0/0:20,0:20:53.98:0,54,480	0/0:13,0:13:39:0,39,350	0/0:30,0:30:77.95:0,78,693	0/0:16,0:16:48:0,48,431	0/0:19,0:19:51.02:0,51,467	0/0:25,0:25:63.02:0,63,577	0/0:15,0:15:32.99:0,33,294	1/1:5,14:19:42.10:471,42,0	0/0:35,0:35:95.98:0,96,859	1/1:0,5:5:12.04:138,12,0
chr10	83322913	.	C	CA	485.93	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.447;DP=396;FS=0.000;HRun=0;HaplotypeScore=37.9452;InbreedingCoeff=0.7745;MQ=53.49;MQ0=23;MQRankSum=-0.843;QD=32.40;ReadPosRankSum=0.013;VQSLOD=3.1085;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:81.26:0,81,1114	0/0:2,0:2:6.02:0,6,84	0/0:16,0:3:6.02:0,6,83	0/0:24,0:5:12.04:0,12,167	0/0:16,0:16:48.15:0,48,654	0/0:25,0:25:72.24:0,72,1006	0/0:12,0:12:30.10:0,30,413	0/0:26,0:20:57.18:0,57,779	0/0:6,0:6:18.06:0,18,251	0/0:11,0:11:33.11:0,33,461	0/0:14,0:14:42.14:0,42,585	0/0:1,0:1:3.01:0,3,42	0/0:6,0:6:18.06:0,18,252	0/0:10,0:10:27.09:0,27,377	0/0:15,0:15:39.10:0,39,511	0/0:15,0:15:42.14:0,42,587	0/0:29,0:29:87.10:0,87,1166	0/0:11,0:9:24.08:0,24,335	0/0:18,0:14:42.14:0,42,587	0/0:19,0:19:57.18:0,57,780	0/0:20,0:20:60.20:0,60,839	0/0:3,0:3:9.03:0,9,126	0/0:10,0:10:30.10:0,30,420	0/0:17,0:17:51.17:0,51,713	0/0:9,0:9:27.07:0,27,359	1/1:2,8:10:27.08:410,27,0	0/0:16,0:16:45.12:0,45,585	1/1:1,4:4:12.04:191,12,0
chr10	83323056	.	A	AG	2875.99	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=7.939;DP=368;FS=3.315;HRun=1;HaplotypeScore=56.4965;InbreedingCoeff=0.8443;MQ=72.59;MQ0=2;MQRankSum=-2.286;QD=21.95;ReadPosRankSum=-0.321;VQSLOD=3.5779;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:50.97:0,51,557	0/0:5,0:5:15.03:0,15,178	0/0:23,0:16:14.35:0,14,255	0/1:23,0:15:10.11:10,0,107	0/0:11,0:11:30.05:0,30,330	0/0:19,0:19:54.03:0,54,589	0/0:5,0:5:15.03:0,15,167	1/1:13,7:20:54.74:519,55,0	0/0:6,0:6:8.48:0,8,148	0/0:21,0:21:60.11:0,60,669	0/0:16,0:16:45.11:0,45,546	0/0:8,0:8:24.07:0,24,298	0/0:13,0:13:39.10:0,39,475	0/0:6,0:6:18.03:0,18,204	0/0:13,0:13:39.09:0,39,462	0/0:11,0:11:33.01:0,33,352	0/0:18,0:18:54.11:0,54,625	0/0:12,0:12:33.05:0,33,378	1/1:5,8:13:38.79:414,39,0	1/1:9,15:24:63.30:749,63,0	1/1:0,3:3:2.94:38,3,0	0/0:2,0:2:6.01:0,6,66	0/0:8,0:8:24.05:0,24,282	0/0:9,0:9:20.87:0,21,219	0/0:13,0:13:39.07:0,39,456	1/1:8,8:16:48.02:493,48,0	1/1:0,23:23:54.15:636,54,0	1/1:5,3:8:20.98:209,21,0
chr10	83323057	.	G	GGA	4172.70	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.767;DP=374;FS=1.978;HRun=0;HaplotypeScore=62.3657;InbreedingCoeff=0.9416;MQ=72.85;MQ0=2;MQRankSum=-1.776;QD=37.93;ReadPosRankSum=-0.183;VQSLOD=5.2199;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:50.99:0,51,680	0/0:4,0:5:15.05:0,15,222	0/0:22,0:16:12.45:0,12,326	0/0:25,0:16:19.52:0,20,222	0/0:10,0:11:30.07:0,30,410	0/0:19,0:20:54.10:0,54,760	0/0:6,0:6:15.03:0,15,228	1/1:20,0:20:43.62:688,44,0	0/0:6,0:6:12.87:0,13,209	0/0:20,0:21:60.19:0,60,876	0/0:16,0:16:45.11:0,45,667	0/0:8,0:8:24.08:0,24,381	0/0:13,0:13:39.13:0,39,619	0/0:5,0:6:18.05:0,18,249	0/0:13,0:13:39.11:0,39,578	0/0:11,0:11:33.07:0,33,439	0/0:17,0:18:54.16:0,54,789	0/0:12,0:12:36.06:0,36,496	1/1:14,0:14:41.70:542,42,0	1/1:25,0:25:71.38:1044,71,0	1/1:3,0:3:5.93:71,6,0	0/0:2,0:2:6.02:0,6,94	0/0:9,0:9:24.06:0,24,376	0/0:8,0:8:20.90:0,21,295	0/0:13,0:13:39.08:0,39,569	1/1:9,7:17:50.96:658,51,0	1/1:23,0:23:54.14:881,54,0	1/1:7,1:8:21:289,21,0
chr10	83323068	.	A	AC	2865.25	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.610;DP=392;FS=0.000;HRun=1;HaplotypeScore=64.0322;InbreedingCoeff=0.9662;MQ=80.94;MQ0=2;MQRankSum=-2.719;QD=24.28;ReadPosRankSum=-1.597;VQSLOD=3.0494;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:47.07:0,47,533	0/0:5,0:5:14.96:0,15,171	0/0:24,0:18:36.15:0,36,292	0/0:22,0:17:11.79:0,12,280	0/0:12,0:12:32.99:0,33,365	0/0:23,0:23:69.04:0,69,762	0/0:9,0:9:27.05:0,27,296	1/1:1,24:26:63.51:657,64,0	0/0:8,0:8:18.93:0,19,242	0/0:21,0:21:63.10:0,63,758	0/0:16,0:16:42.13:0,42,525	0/0:9,0:9:27.08:0,27,335	0/0:13,0:13:39.13:0,39,501	0/0:5,0:5:14.96:0,15,171	0/0:14,0:14:42.10:0,42,497	0/0:11,0:11:30.08:0,30,356	0/0:19,0:19:35.61:0,36,605	0/0:10,0:10:30:0,30,348	1/1:5,9:14:35.93:361,36,0	1/1:1,28:29:80.97:875,81,0	1/1:2,3:5:14.94:137,15,0	0/0:3,0:3:9.02:0,9,105	0/0:11,0:11:33.08:0,33,389	0/0:8,0:8:19.63:0,20,255	0/0:12,0:12:33.11:0,33,423	1/1:7,0:16:38.92:349,39,0	1/1:5,15:21:57.56:573,58,0	1/1:0,0:6:12:110,12,0
chr10	83344949	.	TACAC	T	1563.62	PASS	AB=0.833;AC=6;AF=0.107;AN=56;BaseQRankSum=11.042;DP=864;FS=12.650;HRun=0;HaplotypeScore=266.4028;InbreedingCoeff=-0.1202;MQ=50.78;MQ0=1;MQRankSum=-6.113;QD=9.48;ReadPosRankSum=1.472;VQSLOD=0.7503;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:56.58:0,57,1080	0/0:18,0:18:46.29:0,46,1067	0/0:14,0:11:30.06:0,30,460	0/0:18,0:18:50.75:0,51,705	0/0:42,0:42:65.01:0,65,1437	0/0:35,0:35:75.22:0,75,1831	0/0:17,0:17:23.54:0,24,329	0/1:32,0:37:99:348,0,191	0/0:34,0:34:66.11:0,66,1518	0/0:47,0:47:99:0,135,3116	0/0:34,0:34:81.28:0,81,2039	0/0:33,0:33:77.25:0,77,1840	0/0:45,0:45:99:0,111,2614	0/0:38,0:38:81.19:0,81,1915	0/0:42,0:42:84.23:0,84,1815	0/0:41,0:41:99:0,108,2469	0/0:31,0:31:84.12:0,84,1667	0/0:22,0:22:54.23:0,54,888	0/1:11,0:11:35.13:35,0,109	0/1:20,6:26:99:290,0,170	0/0:24,0:24:22.54:0,23,232	0/0:32,0:32:60.60:0,61,1301	0/0:29,0:29:56.99:0,57,1291	0/0:28,0:28:72.24:0,72,1691	0/0:33,0:33:71.22:0,71,1740	0/1:30,6:36:99:272,0,463	0/1:18,14:32:74.18:540,0,74	0/1:15,5:20:99:203,0,134
chr10	83344955	.	TAC	T	438.83	PASS	AB=0.823;AC=5;AF=0.089;AN=56;BaseQRankSum=10.668;DP=815;FS=32.934;HRun=0;HaplotypeScore=215.3511;InbreedingCoeff=-0.0993;MQ=53.30;MQ0=1;MQRankSum=-4.782;QD=3.03;ReadPosRankSum=0.181;VQSLOD=1.5511;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:74.67:0,75,1130	0/0:16,0:16:39.13:0,39,747	0/0:14,0:12:23.28:0,23,486	0/0:15,0:15:43.67:0,44,731	0/0:34,0:34:60.33:0,60,1072	0/0:32,0:32:69.24:0,69,1311	0/0:16,0:16:21.06:0,21,342	0/1:39,0:36:35.40:35,0,242	0/0:33,0:33:63.20:0,63,1162	0/0:45,0:45:99:0,133,2268	0/0:32,0:32:81.24:0,81,1481	0/0:30,0:30:74.62:0,75,1382	0/0:42,0:42:99:0,102,1892	0/0:37,0:37:75.21:0,75,1333	0/0:33,0:33:75.12:0,75,1261	0/0:41,0:41:99:0,102,1817	0/0:33,0:33:78.19:0,78,1415	0/0:23,0:23:62.67:0,63,998	0/0:13,0:13:16.21:0,16,173	0/1:19,6:25:99:122,0,119	0/0:17,0:17:16.72:0,17,134	0/0:34,0:34:61.03:0,61,1037	0/0:27,0:27:57.16:0,57,1002	0/0:29,0:29:78.25:0,78,1450	0/0:32,0:32:68.60:0,69,1245	0/1:27,6:33:90.94:91,0,417	0/1:16,14:30:70.95:256,0,71	0/1:13,5:18:51.87:52,0,200
chr10	83345488	.	GA	G	2637.72	PASS	AB=0.586;AC=13;AF=0.232;AN=56;BaseQRankSum=9.609;DP=484;FS=5.763;HRun=10;HaplotypeScore=43.3675;InbreedingCoeff=0.8274;MQ=59.90;MQ0=11;MQRankSum=0.268;QD=18.98;ReadPosRankSum=-0.926;VQSLOD=3.7849;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,4:34:6.03:0,6,733	0/0:9,0:9:27.07:0,27,299	0/0:26,0:5:12.02:0,12,123	0/0:21,0:6:9:0,9,83	0/0:18,0:18:42.11:0,42,465	0/0:22,0:22:63.14:0,63,674	0/0:18,2:20:43.15:0,43,520	1/1:3,25:28:74.95:644,75,0	0/0:8,0:8:18.05:0,18,199	0/0:11,0:11:21.05:0,21,232	0/0:20,0:21:53.96:0,54,569	0/0:10,0:10:27.07:0,27,298	0/0:11,0:11:30.08:0,30,332	0/0:10,0:10:30.07:0,30,325	0/0:18,0:18:48.11:0,48,522	0/0:15,0:15:39.11:0,39,431	0/0:13,0:14:26.88:0,27,268	0/0:4,0:12:28.87:0,29,185	1/1:3,21:23:62.99:547,63,0	1/1:4,27:30:77.97:677,78,0	1/1:2,10:12:3.61:185,4,0	0/0:17,1:18:25.08:0,25,478	0/0:12,0:12:33.08:0,33,354	0/0:11,0:11:21.06:0,21,232	0/0:23,0:23:66.16:0,66,715	0/1:5,12:17:27.28:247,0,27	1/1:2,17:19:41.98:365,42,0	1/1:0,8:8:18:156,18,0
chr10	83346063	.	TTA	T	4288.47	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=8.525;DP=500;FS=2.728;HRun=0;HaplotypeScore=106.7017;InbreedingCoeff=0.8273;MQ=61.44;MQ0=2;MQRankSum=-10.260;QD=24.23;ReadPosRankSum=-2.561;VQSLOD=4.9876;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:11.15:11,0,397	0/0:6,0:6:18.02:0,18,258	0/0:17,0:12:21.96:0,22,363	0/0:7,0:5:14.87:0,15,175	0/0:21,0:21:62.91:0,63,1049	0/0:22,0:22:60.17:0,60,1062	0/0:15,0:15:19.03:0,19,209	1/1:10,7:14:37.54:412,38,0	0/0:13,0:13:39.10:0,39,650	0/0:31,0:31:89.41:0,89,1372	0/0:18,0:18:54.08:0,54,839	0/0:22,0:22:66.06:0,66,1197	0/0:18,0:18:54.04:0,54,850	0/0:17,0:17:50.50:0,51,878	0/0:13,0:13:39.10:0,39,646	0/0:14,0:14:42.11:0,42,767	0/0:21,0:21:63.09:0,63,1090	0/1:14,0:14:13.10:13,0,171	1/1:7,7:13:38.37:459,38,0	1/1:10,23:32:93.86:1087,94,0	1/1:6,4:11:23.84:198,24,0	0/0:13,0:13:17.80:0,18,584	0/0:20,0:20:60.10:0,60,1074	0/0:17,0:17:48.16:0,48,908	0/0:18,0:18:54.17:0,54,998	1/1:9,12:20:59.98:735,60,0	1/1:4,20:24:72.08:975,72,0	1/1:1,8:9:27.06:397,27,0
chr10	83346083	.	TGTATATGAGTACTTTGTA	T	9787.83	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.462;DP=498;FS=6.649;HRun=0;HaplotypeScore=256.0961;InbreedingCoeff=0.9819;MQ=69.21;MQ0=0;MQRankSum=-11.913;QD=82.95;ReadPosRankSum=1.417;VQSLOD=3.6463;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.29:0,84,6487	0/0:4,0:4:12.04:0,12,917	0/0:21,0:21:54.16:0,54,2730	0/0:11,0:10:27.56:0,28,1889	0/0:18,0:18:54.18:0,54,4384	0/0:21,0:21:54.19:0,54,4461	0/0:15,0:15:42.14:0,42,3220	1/1:4,10:13:33.09:668,33,0	0/0:18,0:18:54.19:0,54,4553	0/0:32,0:32:93.32:0,93,7648	0/0:17,0:17:51.18:0,51,4187	0/0:20,0:20:60.21:0,60,4557	0/0:13,0:13:36.12:0,36,2683	0/0:19,0:19:54.19:0,54,4494	0/0:13,0:13:39.13:0,39,3143	0/0:24,0:24:63.22:0,63,5221	0/0:22,0:22:66.23:0,66,4992	0/0:13,0:13:33.11:0,33,2573	1/1:4,13:16:36.10:1078,36,0	1/1:7,18:25:51.18:2634,51,0	1/1:3,13:16:9.03:353,9,0	0/0:13,0:13:39.13:0,39,2830	0/0:24,0:24:69.22:0,69,5473	0/0:18,0:18:48.14:0,48,3895	0/0:16,0:16:45.15:0,45,3625	1/1:4,15:19:45.15:1780,45,0	1/1:4,15:19:45.15:2339,45,0	1/1:2,6:8:18.06:936,18,0
chr10	83346100	.	TA	T	1348.05	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.686;DP=487;FS=2.685;HRun=1;HaplotypeScore=101.7470;InbreedingCoeff=0.9844;MQ=69.57;MQ0=0;MQRankSum=-12.445;QD=14.34;ReadPosRankSum=-0.950;VQSLOD=2.8156;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.29:0,84,1343	0/0:5,0:5:15.05:0,15,236	0/0:18,0:18:48.14:0,48,739	0/0:15,0:15:36.12:0,36,574	0/0:20,0:20:60.20:0,60,939	0/0:22,0:22:60.20:0,60,959	0/0:14,0:14:42.12:0,42,645	1/1:10,0:10:29.41:323,29,0	0/0:23,0:23:69.24:0,69,1103	0/0:32,0:32:96.33:0,96,1529	0/0:17,0:17:51.17:0,51,814	0/0:17,0:17:51.16:0,51,788	0/0:13,0:13:39.13:0,39,624	0/0:20,0:20:60.20:0,60,957	0/0:20,0:20:60.19:0,60,936	0/0:27,0:27:78.27:0,78,1247	0/0:20,0:20:60.20:0,60,959	0/0:12,0:12:36.12:0,36,574	1/1:13,0:12:34.44:327,34,0	1/1:18,0:18:43.32:170,43,0	1/1:13,0:13:8.37:63,8,0	0/0:12,0:12:36.12:0,36,575	0/0:25,0:25:75.26:0,75,1199	0/0:19,0:19:57.15:0,57,859	0/0:14,0:14:42.13:0,42,649	1/1:15,0:15:38.82:271,39,0	1/1:15,1:16:43.19:201,43,0	1/1:6,3:9:25.10:189,25,0
chr10	83346738	.	G	GC	5862.17	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-9.273;DP=631;FS=9.502;HRun=0;HaplotypeScore=63.0257;InbreedingCoeff=0.9993;MQ=92.87;MQ0=0;MQRankSum=-1.086;QD=40.99;ReadPosRankSum=-1.493;VQSLOD=4.2843;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,1934	0/0:9,0:9:27.08:0,27,359	0/0:29,0:30:74.14:0,74,1058	0/0:22,0:22:66.21:0,66,895	0/0:17,0:17:51.17:0,51,713	0/0:10,0:10:30.09:0,30,404	0/0:23,0:23:69.23:0,69,964	1/1:1,26:27:78.23:1194,78,0	0/0:27,0:27:81.24:0,81,1097	0/0:35,0:35:99:0,102,1407	0/0:14,0:14:42.13:0,42,569	0/0:22,0:22:66.20:0,66,904	0/0:28,0:28:81.27:0,81,1128	0/0:22,0:22:66.18:0,66,871	0/0:22,0:22:66.20:0,66,891	0/0:20,0:20:60.20:0,60,838	0/0:33,0:33:93.23:0,93,1227	0/0:30,0:30:90.26:0,90,1218	1/1:1,16:17:45.08:653,45,0	1/1:0,22:23:65.85:957,66,0	1/1:1,25:26:69.15:1069,69,0	0/0:29,0:29:87.22:0,87,1145	0/0:19,0:19:54.08:0,54,712	0/0:17,0:17:51.12:0,51,675	0/0:12,0:12:36.11:0,36,489	1/1:0,20:20:57.18:887,57,0	1/1:2,20:22:44.82:718,45,0	1/1:0,8:8:24.08:383,24,0
chr10	83347637	.	C	CT	1909.40	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-8.861;DP=687;FS=6.668;HRun=10;HaplotypeScore=75.0841;InbreedingCoeff=0.8156;MQ=72.70;MQ0=0;MQRankSum=-0.783;QD=19.09;ReadPosRankSum=-0.550;VQSLOD=4.1148;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,38:44:99:1149,111,0	0/0:9,0:10:20.01:0,20,154	0/1:14,0:14:5.99:6,0,151	0/0:11,0:11:23.83:0,24,179	0/0:25,2:28:3.96:0,4,434	0/0:16,0:17:43.97:0,44,351	1/1:6,19:25:29.49:519,29,0	0/0:29,0:29:62.22:0,62,497	0/0:27,0:27:77.89:0,78,637	0/0:29,0:30:73.76:0,74,592	0/0:25,0:25:59.90:0,60,493	0/0:30,0:30:83.89:0,84,690	0/0:20,0:20:50.93:0,51,419	0/0:30,0:30:65.87:0,66,538	0/0:33,1:34:51.87:0,52,630	0/0:29,1:30:42.89:0,43,556	0/0:24,0:24:62.89:0,63,513	1/1:1,13:16:38.83:381,39,0	0/0:18,0:19:43.98:0,44,351	0/0:24,0:25:71.90:0,72,588	0/0:17,1:18:12.95:0,13,313	0/0:29,0:29:80.89:0,81,664	0/0:21,0:21:38.92:0,39,320	0/0:27,0:27:71.91:0,72,591	0/0:25,0:25:62.91:0,63,517	0/0:29,0:30:58.92:0,59,474	0/0:33,1:34:48.87:0,49,604	0/0:14,0:14:32.93:0,33,271
chr10	83348348	.	C	CATCT	5718.11	PASS	AB=1.000;AC=29;AF=0.580;AN=50;BaseQRankSum=0.868;DP=687;FS=7.503;HRun=0;HaplotypeScore=129.0883;InbreedingCoeff=0.8404;MQ=70.69;MQ0=2;MQRankSum=1.453;QD=16.06;ReadPosRankSum=-3.163;VQSLOD=3.5289;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,1:31:40.28:861,40,0	1/1:3,8:11:6.02:134,6,0	./.	./.	0/0:33,0:34:57.19:0,57,887	0/0:24,0:24:45.15:0,45,702	./.	0/0:34,0:34:30.09:0,30,410	0/0:26,0:26:30.10:0,30,448	1/1:18,10:28:36.12:813,36,0	1/1:11,12:23:30.10:566,30,0	1/1:24,7:31:26.61:380,27,0	1/1:24,0:24:39.13:879,39,0	1/1:7,12:19:12.04:281,12,0	1/1:10,16:25:6.02:116,6,0	1/1:11,12:24:12.04:283,12,0	1/1:10,16:26:6.02:142,6,0	1/1:19,2:19:15.90:306,16,0	0/0:23,0:23:21.07:0,21,328	0/0:34,0:34:48.16:0,48,733	0/0:27,0:27:42:0,42,534	1/1:7,7:16:21.07:406,21,0	1/1:13,12:24:12.04:283,12,0	1/1:12,9:21:9.03:213,9,0	0/0:35,0:35:72.24:0,72,1111	0/1:29,0:28:52.65:53,0,509	0/0:30,0:30:42.13:0,42,633	0/0:14,0:13:15.05:0,15,234
chr10	83348385	.	ATCT	A	2120.70	PASS	AB=0.958;AC=12;AF=0.231;AN=52;BaseQRankSum=10.031;DP=638;FS=4.648;HRun=0;HaplotypeScore=119.7856;InbreedingCoeff=-0.1192;MQ=56.77;MQ0=9;MQRankSum=0.213;QD=8.73;ReadPosRankSum=-2.136;VQSLOD=2.7277;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,4:32:6.32:405,6,0	0/1:10,0:10:30.75:31,0,113	./.	./.	0/0:34,0:34:90.30:0,90,1545	0/0:26,0:24:66.22:0,66,975	0/0:11,0:11:23.67:0,24,304	0/0:50,0:49:99:0,138,1802	0/0:21,0:21:47.37:0,47,897	0/1:32,0:31:99:122,0,902	0/1:21,0:21:99:318,0,365	0/1:28,1:29:99:327,0,500	0/1:23,3:26:99:235,0,436	0/0:22,0:21:26.74:0,27,433	0/0:31,0:30:2.61:0,3,588	0/0:21,0:21:36.12:0,36,520	0/0:27,0:28:29.81:0,30,406	0/1:16,3:17:99:195,0,144	0/0:17,0:16:43.34:0,43,645	0/0:27,0:27:56.68:0,57,994	0/1:14,3:17:3.87:4,0,509	0/1:17,0:17:99:184,0,300	0/0:31,0:29:59.06:0,59,942	0/0:22,0:22:42.10:0,42,597	0/0:29,0:29:77.92:0,78,1362	0/1:30,0:29:99:374,0,772	0/0:22,0:22:60.19:0,60,1000	0/1:9,0:7:70.39:70,0,189
chr10	83348388	.	T	TA	2568.36	PASS	AB=0.928;AC=13;AF=0.250;AN=52;BaseQRankSum=13.259;DP=637;FS=3.701;HRun=0;HaplotypeScore=99.9431;InbreedingCoeff=-0.1210;MQ=56.82;MQ0=10;MQRankSum=1.103;QD=9.14;ReadPosRankSum=1.563;VQSLOD=3.8624;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:37:8.90:464,9,0	0/1:9,0:9:47.87:48,0,72	./.	./.	0/0:35,0:35:96.31:0,96,1326	0/0:27,0:25:75.25:0,75,1047	0/0:12,0:12:25.62:0,26,322	0/0:50,0:49:99:0,147,1917	0/0:21,0:22:45.25:0,45,780	0/1:32,0:31:99:110,0,667	0/1:21,0:21:99:348,0,294	0/1:21,7:28:99:362,0,355	0/1:28,0:28:99:290,0,409	0/0:21,0:20:11.99:0,12,241	0/1:30,0:29:2:2,0,541	0/0:20,0:20:17.72:0,18,324	0/0:28,0:28:22.25:0,22,347	0/1:16,3:18:69.37:240,0,69	0/0:17,0:16:48.02:0,48,600	0/0:24,0:24:51.54:0,52,806	0/1:16,0:16:3.89:4,0,417	0/1:16,0:16:99:206,0,214	0/0:30,0:28:44.66:0,45,673	0/0:19,1:20:28.33:0,28,431	0/0:28,0:29:84.26:0,84,1156	0/1:20,14:33:99:574,0,593	0/0:21,0:21:60.19:0,60,822	0/1:8,2:7:68.45:68,0,189
chr10	83348885	.	CTTTTTTTT	C	4425.09	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.054;DP=490;FS=3.583;HRun=20;HaplotypeScore=134.4209;InbreedingCoeff=0.9654;MQ=68.18;MQ0=3;MQRankSum=-9.451;QD=36.57;ReadPosRankSum=6.874;VQSLOD=1.0009;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:23:31.65:0,32,420	0/0:4,0:4:12.04:0,12,436	0/0:30,0:12:20.07:0,20,311	0/0:22,0:17:19.56:0,20,550	0/0:23,0:26:72.22:0,72,2014	0/0:9,0:11:24.08:0,24,892	0/0:3,0:13:30.09:0,30,370	1/1:6,12:18:35.48:716,35,0	0/0:16,0:17:39.13:0,39,1422	0/0:24,0:27:63.18:0,63,1817	0/0:11,0:13:33.11:0,33,1030	0/0:9,0:8:15.05:0,15,530	0/0:15,0:15:30.10:0,30,1042	0/0:15,0:17:33.11:0,33,980	0/0:14,0:16:45.14:0,45,1487	0/0:11,0:12:33.11:0,33,1145	0/0:32,0:34:93.30:0,93,3020	0/0:2,0:15:30.08:0,30,521	1/1:6,12:18:35:619,35,0	1/1:6,18:24:41.01:880,41,0	1/1:2,4:6:5.45:125,5,0	0/0:13,0:13:18.06:0,18,541	0/0:17,0:17:48.15:0,48,1433	0/0:14,0:14:39.13:0,39,1353	0/0:13,0:19:39.13:0,39,1148	1/1:2,0:23:62.65:907,63,0	1/1:7,14:21:38.61:802,39,0	1/1:1,0:10:23.84:376,24,0
chr10	83349311	.	T	TAG	8546.08	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-13.921;DP=569;FS=1.116;HRun=0;HaplotypeScore=70.9847;InbreedingCoeff=0.9987;MQ=71.01;MQ0=0;MQRankSum=-5.831;QD=48.01;ReadPosRankSum=-2.612;VQSLOD=5.2017;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:54.18:0,54,756	0/0:9,0:9:27.09:0,27,378	0/0:13,0:13:28.99:0,29,336	0/0:9,0:9:21.04:0,21,274	0/0:21,0:21:57.19:0,57,797	0/0:21,0:21:57.19:0,57,796	0/0:19,0:19:51.17:0,51,714	1/1:3,21:23:60.21:1060,60,0	0/0:21,0:21:63.21:0,63,882	0/0:31,0:31:84.28:0,84,1176	0/0:19,0:19:57.19:0,57,798	0/0:18,0:18:54.18:0,54,756	0/0:15,0:15:39.13:0,39,546	0/0:15,0:15:45.15:0,45,627	0/0:20,0:20:48.16:0,48,672	0/0:17,0:17:48.16:0,48,672	0/0:14,0:14:39.13:0,39,544	0/0:12,0:12:27.09:0,27,378	1/1:0,17:20:57.14:941,57,0	1/1:1,28:29:78.27:1404,78,0	1/1:0,24:25:60.21:1080,60,0	0/0:28,0:28:75.25:0,75,1050	0/0:26,0:26:75.25:0,75,1050	0/0:17,0:17:48.16:0,48,670	0/0:21,0:21:60.20:0,60,839	1/1:1,29:31:93.30:1632,93,0	1/1:0,32:31:90.31:1618,90,0	1/1:0,16:17:45.15:810,45,0
chr10	83349378	.	G	GA	1957.84	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=0.532;DP=557;FS=2.523;HRun=5;HaplotypeScore=86.0490;InbreedingCoeff=0.9784;MQ=90.87;MQ0=0;MQRankSum=-5.216;QD=29.22;ReadPosRankSum=0.961;VQSLOD=4.1034;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:60.15:765,60,0	0/0:3,0:3:9.01:0,9,89	0/0:27,0:27:33.82:0,34,553	0/0:29,0:28:49.43:0,49,542	0/0:11,0:11:27.07:0,27,290	0/0:21,0:21:60.15:0,60,645	1/1:1,23:24:63.20:823,63,0	0/0:34,0:28:57.11:0,57,597	0/0:15,0:15:36.09:0,36,387	0/0:16,0:16:42.10:0,42,446	0/0:15,0:15:42.07:0,42,434	0/0:15,0:15:45.09:0,45,474	0/0:16,0:16:42.08:0,42,437	0/0:12,0:12:30.07:0,30,322	0/0:25,0:25:69.14:0,69,725	0/0:18,0:18:45.04:0,45,454	0/0:15,0:15:27.06:0,27,290	1/1:3,14:17:39.13:513,39,0	0/0:20,0:20:48.12:0,48,514	0/0:20,0:20:48.10:0,48,515	0/0:24,0:24:51.04:0,51,532	0/0:20,0:20:60.15:0,60,644	0/0:18,0:18:48.12:0,48,515	0/0:19,0:19:42.10:0,42,451	0/0:20,0:20:57.12:0,57,604	0/0:27,0:27:78.04:0,78,800	0/0:25,0:25:66.05:0,66,681	0/0:23,0:23:66.17:0,66,709
chr10	83349405	.	T	TTC	117.48	PASS	AB=0.967;AC=15;AF=0.341;AN=44;BaseQRankSum=2.058;DP=503;FS=2.095;HRun=0;HaplotypeScore=99.4992;InbreedingCoeff=0.1199;MQ=76.85;MQ0=15;MQRankSum=-1.824;QD=0.57;ReadPosRankSum=0.412;VQSLOD=1.9311;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:20:0:0,0,0	./.	./.	./.	0/1:11,0:12:6.05:6,0,92	0/0:24,0:23:9.65:0,10,189	0/1:20,0:19:0:0,0,0	./.	0/1:7,4:12:35.72:36,0,40	0/1:22,0:21:0.69:106,0,1	1/1:18,3:21:6.06:39,6,0	0/0:13,0:13:17.07:0,17,166	0/0:20,0:20:39.48:0,39,375	0/0:9,0:10:10.34:0,10,76	0/0:24,0:24:27.06:0,27,289	0/0:17,0:17:23.94:0,24,257	0/1:17,0:17:16.88:17,0,115	1/1:13,0:12:0.47:1,0,0	./.	0/0:10,0:10:2.36:0,2,10	./.	0/1:13,0:15:13.82:14,0,43	0/0:16,0:14:10.10:0,10,67	0/0:17,0:20:17.88:0,18,177	0/0:14,0:17:5.68:0,6,28	0/1:19,0:21:9.53:10,0,28	0/1:11,0:16:5.95:6,0,45	1/1:15,0:15:0.94:2,1,0
chr10	83349457	.	TTC	T	2972.16	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.480;DP=556;FS=21.108;HRun=0;HaplotypeScore=134.4333;InbreedingCoeff=0.9760;MQ=51.52;MQ0=24;MQRankSum=-13.783;QD=21.08;ReadPosRankSum=-3.276;VQSLOD=1.3884;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:4,9:11:23.42:161,23,0	0/0:4,0:4:12.04:0,12,208	0/0:28,0:8:20.96:0,21,285	0/0:53,0:13:20.24:0,20,268	0/0:28,0:27:66.17:0,66,848	0/0:28,0:27:62.27:0,62,1011	1/1:2,9:11:17.25:134,17,0	1/1:3,19:21:54.17:703,54,0	0/0:22,0:22:57.16:0,57,902	0/0:32,0:31:72.77:0,73,1195	0/0:21,0:20:45.15:0,45,744	0/0:22,0:22:54.18:0,54,927	0/0:25,0:24:62.93:0,63,1004	0/0:15,0:15:42.14:0,42,704	0/0:25,0:25:66.22:0,66,1084	0/0:21,0:21:54.18:0,54,914	0/0:14,0:14:37.36:0,37,567	1/1:4,3:6:11.73:119,12,0	1/1:10,4:14:24.70:333,25,0	1/1:5,4:9:19.60:179,20,0	1/1:7,5:12:8.43:75,8,0	0/0:19,0:19:45.14:0,45,726	0/0:17,0:17:50.86:0,51,764	0/0:30,0:30:69.20:0,69,1108	0/0:11,0:11:27.09:0,27,445	1/1:5,15:20:50.47:601,50,0	1/1:11,12:22:54.94:590,55,0	1/1:2,8:9:24.06:296,24,0
chr10	83349463	.	C	CTG	2072.26	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=12.561;DP=604;FS=20.544;HRun=0;HaplotypeScore=163.4450;InbreedingCoeff=0.7317;MQ=50.48;MQ0=24;MQRankSum=-12.895;QD=12.12;ReadPosRankSum=-3.053;VQSLOD=1.6396;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:12:16.58:135,17,0	0/0:4,0:4:12.04:0,12,183	0/0:33,0:9:23.99:0,24,293	0/0:60,0:13:17.06:0,17,246	0/0:26,0:26:39.01:0,39,570	0/0:28,0:27:65.27:0,65,937	1/1:16,0:16:4.39:99,4,0	0/1:30,0:26:7.07:466,0,7	0/0:23,0:23:60.16:0,60,842	0/0:30,0:29:81.19:0,81,1137	0/0:21,0:20:48.14:0,48,702	0/0:20,0:20:54.18:0,54,823	0/0:24,0:23:62.93:0,63,901	0/0:20,0:20:57.12:0,57,763	0/0:24,0:24:69.22:0,69,1029	0/0:21,0:21:57.09:0,57,846	0/0:14,0:14:39.08:0,39,565	0/1:8,0:7:4.67:36,0,5	1/1:9,4:12:32.19:341,32,0	1/1:12,3:15:11.24:131,11,0	1/1:12,1:13:7.50:56,7,0	0/0:20,0:20:50.96:0,51,714	0/0:19,0:19:50.88:0,51,719	0/0:30,0:30:72.21:0,72,1050	0/0:16,0:16:39.08:0,39,513	0/1:23,0:23:23.36:199,0,23	1/1:20,7:26:59.33:682,59,0	1/1:12,0:11:22.34:120,22,0
chr10	83349481	.	CT	C	2579.18	PASS	AB=0.685;AC=15;AF=0.268;AN=56;BaseQRankSum=14.009;DP=632;FS=3.694;HRun=1;HaplotypeScore=166.9151;InbreedingCoeff=0.5398;MQ=50.75;MQ0=26;MQRankSum=-14.111;QD=13.79;ReadPosRankSum=-0.371;VQSLOD=2.9484;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:13:2.31:34,2,0	0/0:6,0:6:18.06:0,18,277	0/0:38,0:12:33.04:0,33,479	0/0:51,1:15:28.29:0,28,356	0/0:28,0:27:81.26:0,81,1255	0/0:22,0:22:66.21:0,66,1020	1/1:5,1:19:2.69:57,3,0	0/1:16,17:27:69.37:526,0,69	0/0:21,0:21:60.18:0,60,909	0/0:33,0:32:90.31:0,90,1415	0/0:19,0:18:51.17:0,51,807	0/0:22,0:22:66.22:0,66,1039	0/0:26,0:25:75.23:0,75,1134	0/0:23,0:23:69.21:0,69,1039	0/0:28,0:28:81.25:0,81,1223	0/0:23,0:23:66.22:0,66,1051	0/0:18,0:18:51.11:0,51,735	0/1:3,0:6:2.88:103,0,3	1/1:11,6:14:18.24:327,18,0	0/1:10,7:18:69.41:212,0,69	0/1:8,4:14:1.51:58,0,2	0/0:18,0:18:48.16:0,48,763	0/0:18,0:18:54.13:0,54,831	0/0:32,0:32:84.18:0,84,1325	0/0:17,0:17:42.09:0,42,620	1/1:5,17:23:12.65:652,13,0	0/1:18,8:28:31.56:479,0,32	1/1:2,7:10:27.03:304,27,0
chr10	83349492	.	T	TCACACACACACA	9449.58	PASS	AB=0.969;AC=19;AF=0.339;AN=56;BaseQRankSum=15.564;DP=678;FS=2.896;HRun=0;HaplotypeScore=292.8524;InbreedingCoeff=0.8571;MQ=50.92;MQ0=24;MQRankSum=-15.153;QD=40.38;ReadPosRankSum=-4.230;VQSLOD=3.2322;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:12,3:15:3.24:126,3,0	0/0:5,0:5:15.04:0,15,367	0/0:44,0:19:30.29:0,30,662	0/0:43,0:14:15.04:0,15,274	0/0:27,0:27:71.50:0,72,1949	0/0:23,0:24:60.14:0,60,1654	1/1:21,1:23:14.64:553,15,0	1/1:55,0:38:77.92:1523,78,0	0/0:24,0:24:63.18:0,63,1923	0/0:32,0:31:68.25:0,68,2318	0/0:17,0:16:33.10:0,33,1037	0/0:25,0:25:36.14:0,36,1512	0/0:25,0:24:50.76:0,51,1632	0/0:24,0:24:66.17:0,66,1956	0/0:28,0:28:61.43:0,61,1962	0/0:24,0:24:63.17:0,63,1813	0/0:17,0:17:42.03:0,42,1177	1/1:6,2:8:21.04:760,21,0	1/1:23,0:20:50.82:957,51,0	1/1:17,0:20:25.69:703,26,0	1/1:18,0:18:3.01:148,3,0	0/0:18,0:18:45.57:0,46,1148	0/0:15,0:15:39.08:0,39,1115	0/0:32,0:32:71.21:0,71,2045	0/0:19,0:19:32.94:0,33,1032	0/1:30,0:31:36.44:1974,0,36	1/1:29,0:30:63.03:1743,63,0	1/1:9,0:11:28.34:961,28,0
chr10	83349505	.	T	TACAC	5276.02	PASS	AB=0.922;AC=14;AF=0.250;AN=56;BaseQRankSum=11.125;DP=682;FS=2.938;HRun=0;HaplotypeScore=204.6521;InbreedingCoeff=0.5655;MQ=49.19;MQ0=18;MQRankSum=-13.849;QD=22.26;ReadPosRankSum=-2.912;VQSLOD=4.0733;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:13.18:0,13,156	0/0:5,0:5:12.03:0,12,182	0/0:48,0:24:50.84:0,51,834	0/0:42,0:15:9.99:0,10,358	0/0:27,0:26:63.20:0,63,1058	0/0:27,0:27:72.24:0,72,1198	0/1:23,0:23:17.33:17,0,76	1/1:52,9:46:92.07:1465,92,0	0/0:24,0:24:69.22:0,69,1179	0/0:29,0:29:72.19:0,72,1239	0/0:11,0:11:30.10:0,30,525	0/0:24,0:24:57.16:0,57,935	0/0:20,0:19:54.18:0,54,928	0/0:23,0:23:66.21:0,66,1136	0/0:28,0:28:75.24:0,75,1270	0/0:25,0:25:63.20:0,63,1068	0/0:17,0:16:42.14:0,42,718	0/1:10,0:10:42.12:42,0,151	1/1:21,6:23:46.72:749,47,0	1/1:8,14:22:26.81:663,27,0	1/1:13,6:19:2.82:92,3,0	0/0:17,0:17:42.11:0,42,674	0/0:13,0:13:30.10:0,30,530	0/0:32,0:32:31.15:0,31,1192	0/0:15,0:15:36.01:0,36,606	0/1:24,4:28:99:604,0,136	1/1:18,15:33:69.07:1399,69,0	0/1:10,3:13:44.02:245,0,44
chr10	83349527	.	TATAC	T	3008.90	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.511;DP=628;FS=4.790;HRun=0;HaplotypeScore=189.7042;InbreedingCoeff=0.9843;MQ=54.65;MQ0=3;MQRankSum=-10.250;QD=23.15;ReadPosRankSum=-1.728;VQSLOD=2.8164;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:26.11:0,26,682	0/0:5,0:5:12.04:0,12,305	0/0:38,0:28:57.11:0,57,1194	0/0:37,0:25:49.42:0,49,964	0/0:24,0:23:48.16:0,48,1189	0/0:32,0:32:90.29:0,90,2221	0/0:18,0:18:14.53:0,15,324	1/1:20,20:31:54.18:938,54,0	0/0:27,0:27:66.23:0,66,1674	0/0:27,0:28:69.09:0,69,1551	0/0:9,0:9:21.07:0,21,532	0/0:22,0:22:57.20:0,57,1358	0/0:21,0:21:51.16:0,51,1208	0/0:22,0:22:57.20:0,57,1417	0/0:29,0:29:75.26:0,75,1867	0/0:26,0:26:72.25:0,72,1795	0/0:12,0:11:27.09:0,27,685	0/0:13,0:13:30.06:0,30,682	1/1:6,10:15:24.07:391,24,0	1/1:5,15:20:26.76:469,27,0	1/1:7,18:25:20.32:365,20,0	0/0:16,0:16:39.13:0,39,960	0/0:11,0:11:21.07:0,21,495	0/0:26,0:26:69.24:0,69,1718	0/0:16,0:16:35.83:0,36,887	0/0:30,0:29:71.98:0,72,1421	1/1:3,26:29:59.93:1022,60,0	0/0:14,0:14:30.10:0,30,677
chr10	83349810	.	CATAT	C	642.47	PASS	AB=0.768;AC=8;AF=0.267;AN=30;BaseQRankSum=4.057;DP=183;FS=1.053;HRun=0;HaplotypeScore=43.8806;InbreedingCoeff=0.3540;MQ=64.09;MQ0=2;MQRankSum=-2.106;QD=8.34;ReadPosRankSum=1.942;VQSLOD=1.7435;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/0:6,0:7:6.02:0,6,122	0/0:5,0:6:2.74:0,3,12	0/1:5,0:11:11.26:47,0,11	0/0:13,0:11:20.34:0,20,317	./.	0/0:5,0:5:2.74:0,3,12	./.	0/0:5,0:5:3.01:0,3,69	./.	0/0:2,0:2:2.94:0,3,18	0/0:4,0:4:3.01:0,3,67	0/0:4,0:4:3.01:0,3,72	0/1:20,2:24:6.16:6,0,675	1/1:5,10:16:24.16:426,24,0	0/0:5,0:5:6.02:0,6,103	./.	./.	./.	./.	./.	0/0:4,0:5:5.75:0,6,60	1/1:6,0:11:12.48:112,12,0	./.	1/1:5,0:14:18.02:167,18,0
chr10	83351514	.	ACC	A	540.35	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=0.182;DP=316;FS=21.817;HRun=12;HaplotypeScore=52.3239;InbreedingCoeff=0.6705;MQ=76.97;MQ0=1;MQRankSum=-0.267;QD=6.84;ReadPosRankSum=0.356;VQSLOD=-0.5841;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,102,962	0/0:2,0:2:3.01:0,3,43	0/0:12,0:13:2.98:0,3,83	0/0:8,0:6:5.23:0,5,42	0/0:9,0:9:8.98:0,9,73	0/0:9,0:11:5.50:0,5,47	0/0:18,0:18:42.05:0,42,398	1/1:8,5:15:17.21:136,17,0	0/0:13,0:13:32.99:0,33,338	0/0:4,0:4:6.01:0,6,71	0/0:5,0:5:6.02:0,6,89	0/0:9,0:9:9.02:0,9,107	0/0:7,0:7:11.99:0,12,117	0/0:9,0:9:5.95:0,6,68	0/0:12,0:12:13.79:0,14,112	0/1:7,0:7:0:0,0,0	0/0:22,0:23:41.59:0,42,525	0/0:8,0:11:23.49:0,23,192	1/1:10,2:12:8.94:91,9,0	1/1:7,5:12:11.94:121,12,0	1/1:10,8:17:20.71:195,21,0	0/0:7,0:7:6.01:0,6,66	./.	0/0:13,0:13:24.04:0,24,299	0/0:8,0:8:9:0,9,92	0/0:7,0:7:0:0,0,0	1/1:5,9:14:14.98:152,15,0	0/0:6,0:6:5.99:0,6,66
chr10	83351747	.	A	AC	6702.84	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-8.158;DP=446;FS=16.692;HRun=2;HaplotypeScore=49.2809;InbreedingCoeff=0.9619;MQ=91.29;MQ0=0;MQRankSum=-0.946;QD=33.68;ReadPosRankSum=-1.767;VQSLOD=2.6547;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:39.13:561,39,0	0/0:9,0:9:15.05:0,15,186	0/0:16,0:16:35.96:0,36,386	0/0:19,0:19:26.66:0,27,590	0/0:8,0:8:18.06:0,18,223	0/0:11,0:11:30.04:0,30,343	1/1:2,23:25:66.22:950,66,0	1/1:3,21:24:57.17:784,57,0	0/0:16,0:16:48.10:0,48,564	0/0:9,0:9:27.08:0,27,329	0/0:2,0:2:6.02:0,6,74	0/0:18,0:18:54.17:0,54,667	0/0:9,0:9:24.05:0,24,271	0/0:15,0:15:42.04:0,42,471	0/0:19,0:19:51.15:0,51,615	0/0:29,0:29:84.25:0,84,1029	0/0:36,0:36:99:0,108,1337	1/1:1,22:23:57.11:820,57,0	1/1:3,21:24:66.11:868,66,0	1/1:0,6:6:18.06:253,18,0	1/1:1,35:36:93.31:1322,93,0	0/0:4,0:4:12.04:0,12,149	0/0:3,0:3:9.03:0,9,111	0/0:19,0:19:57.18:0,57,707	0/0:5,0:5:15:0,15,169	1/1:3,9:12:20.99:238,21,0	1/1:0,21:20:45.06:648,45,0	1/1:0,7:7:18.06:259,18,0
chr10	83351910	.	C	CTT	553.45	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=1.900;DP=494;FS=1.012;HRun=4;HaplotypeScore=75.4090;InbreedingCoeff=0.8566;MQ=71.30;MQ0=1;MQRankSum=-0.941;QD=34.59;ReadPosRankSum=1.606;VQSLOD=3.1279;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:93.62:0,94,970	0/0:7,0:7:18.06:0,18,239	0/0:20,0:16:27:0,27,276	0/0:11,0:9:6.19:0,6,34	0/0:18,0:18:45.13:0,45,585	0/0:24,0:24:63.21:0,63,838	0/0:8,0:8:15.81:0,16,153	0/0:28,0:28:72.18:0,72,904	0/0:14,0:14:36.08:0,36,433	0/0:16,0:16:42.12:0,42,535	0/0:13,0:13:36.10:0,36,464	0/0:23,0:23:66.21:0,66,880	0/0:7,0:7:15.04:0,15,185	0/0:9,0:9:18.06:0,18,240	0/0:13,0:13:36.12:0,36,480	0/0:17,0:17:48.16:0,48,638	0/0:32,0:32:87.26:0,87,1139	1/1:0,16:15:36.12:648,36,0	0/0:21,0:21:41.89:0,42,558	0/0:22,0:22:54.16:0,54,699	0/0:19,0:19:39.12:0,39,518	./.	0/0:10,0:10:24.08:0,24,319	0/0:5,0:5:15.05:0,15,200	0/0:17,0:17:45.11:0,45,566	0/0:32,0:32:81.07:0,81,755	0/0:28,0:28:78.23:0,78,1009	0/0:16,0:16:41.92:0,42,349
chr10	83351914	.	T	TA	2376.44	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-4.530;DP=472;FS=0.000;HRun=9;HaplotypeScore=55.0113;InbreedingCoeff=0.8360;MQ=69.45;MQ0=1;MQRankSum=0.957;QD=21.60;ReadPosRankSum=1.371;VQSLOD=4.3293;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,34:42:90.24:996,90,0	0/0:7,0:7:14.98:0,15,130	0/0:18,0:14:1.36:0,1,116	0/1:9,0:6:0.04:3,0,0	0/0:16,0:16:47.94:0,48,405	0/0:24,0:24:56.92:0,57,486	1/1:2,5:8:17.88:180,18,0	0/0:30,0:30:77.93:0,78,665	0/0:13,0:13:26.90:0,27,224	0/0:17,0:17:41.88:0,42,350	0/0:13,0:13:29.96:0,30,254	0/0:22,0:22:65.99:0,66,573	0/0:6,0:6:11.99:0,12,104	0/0:6,0:6:15:0,15,130	0/0:14,0:14:38.97:0,39,333	0/0:16,0:16:32.99:0,33,286	0/0:32,0:32:71.95:0,72,621	0/0:16,0:15:26.51:0,27,95	0/0:17,0:17:35.98:0,36,313	0/0:20,0:20:47.95:0,48,409	0/0:15,0:15:32.94:0,33,276	0/0:1,0:1:2.98:0,3,22	0/0:10,0:10:23.98:0,24,206	0/0:5,0:5:12:0,12,104	0/0:16,0:16:32.99:0,33,286	1/1:2,30:32:85.46:925,85,0	0/0:27,0:28:77:0,77,651	1/1:1,18:19:39.11:431,39,0
chr10	83353624	.	CGT	C	251.36	PASS	AB=0.908;AC=19;AF=0.365;AN=52;BaseQRankSum=6.679;DP=638;FS=0.000;HRun=0;HaplotypeScore=86.8968;InbreedingCoeff=-0.0073;MQ=67.61;MQ0=9;MQRankSum=-1.882;QD=0.79;ReadPosRankSum=1.356;VQSLOD=0.8932;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:29:11.36:56,11,0	0/0:13,0:13:18:0,18,221	./.	./.	0/1:21,1:23:26.09:26,0,119	0/1:17,2:19:17.62:18,0,119	1/1:19,0:25:5.68:28,6,0	0/0:28,0:28:5.11:0,5,26	0/1:17,1:19:19.74:20,0,182	0/1:20,0:20:11.80:12,0,107	0/1:20,1:21:17.66:18,0,94	0/0:20,0:20:21.06:0,21,293	0/1:13,1:14:14.63:15,0,119	0/0:19,0:19:15:0,15,160	0/0:31,1:32:9.45:0,9,432	0/0:14,0:13:18.51:0,19,227	0/1:21,2:23:29.21:29,0,381	0/1:25,3:28:52.76:53,0,423	0/0:22,0:22:3.01:0,3,45	0/0:13,0:14:15.04:0,15,196	0/0:34,0:38:20.81:0,21,158	0/1:28,5:33:3.31:3,0,228	0/1:12,2:14:23.60:24,0,80	0/0:34,1:36:18.49:0,18,619	1/1:15,1:17:5.63:46,6,0	0/1:16,0:21:30.33:41,0,30	0/0:27,0:27:26.55:0,27,342	1/1:10,0:12:5.59:25,6,0
chr10	83356514	.	GGAGA	G	66.83	PASS	AB=0.852;AC=9;AF=0.196;AN=46;BaseQRankSum=1.828;DP=618;FS=33.406;HRun=0;HaplotypeScore=78.4017;InbreedingCoeff=0.3263;MQ=58.11;MQ0=47;MQRankSum=-1.545;QD=0.64;ReadPosRankSum=-2.163;VQSLOD=-0.4029;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:14:5.22:30,5,0	0/0:9,0:9:9.03:0,9,188	./.	0/0:127,0:25:0:0,0,0	0/0:14,0:13:3:0,3,25	0/1:19,4:23:36.74:37,0,61	1/1:24,0:17:3:30,3,0	./.	./.	0/0:17,0:17:8.81:0,9,99	0/0:13,0:11:8.99:0,9,148	0/0:7,0:7:12.01:0,12,184	0/0:7,0:7:2.60:0,3,10	0/0:9,0:9:3.01:0,3,68	./.	0/0:8,0:8:3.48:0,3,65	0/0:22,0:22:15.02:0,15,278	1/1:16,0:13:3.01:46,3,0	0/0:13,0:12:3.01:0,3,58	0/0:14,0:14:12.01:0,12,170	./.	0/0:10,0:10:3:0,3,25	0/0:19,0:19:3.01:0,3,65	0/0:14,0:13:18:0,18,256	0/0:10,0:10:5.99:0,6,49	1/1:16,0:15:1.31:40,1,0	0/0:18,0:18:15.05:0,15,329	0/0:3,0:2:2.94:0,3,18
chr10	83367706	.	GTGGA	G	2005.88	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.535;DP=637;FS=0.000;HRun=0;HaplotypeScore=104.9603;InbreedingCoeff=0.9110;MQ=87.80;MQ0=0;MQRankSum=-4.521;QD=32.88;ReadPosRankSum=2.054;VQSLOD=3.3984;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,32:39:72.25:1309,72,0	0/0:8,0:8:21.06:0,21,497	0/0:25,0:25:63.19:0,63,1477	0/0:24,0:24:49.98:0,50,1146	0/0:10,0:10:24.08:0,24,574	0/0:16,0:16:39.08:0,39,806	1/1:4,18:22:45.15:818,45,0	0/0:22,0:22:57.18:0,57,1332	0/0:39,0:39:99:0,108,2808	0/0:17,0:17:39.13:0,39,947	0/0:18,0:18:35.64:0,36,896	0/0:30,0:30:81.26:0,81,1976	0/0:19,0:19:54.16:0,54,1351	0/0:25,0:25:69.21:0,69,1709	0/0:19,0:19:54.19:0,54,1383	0/0:37,0:37:99:0,105,2714	0/0:37,0:37:99:0,105,2641	0/0:20,0:20:48.16:0,48,1228	0/0:25,0:25:54.18:0,54,1348	0/0:10,0:10:24.08:0,24,628	0/0:61,0:61:99:0,169,4145	0/0:14,0:14:39.12:0,39,949	0/0:8,0:8:21.07:0,21,549	0/0:35,0:35:96.29:0,96,2438	0/0:15,0:15:39.13:0,39,968	0/0:22,0:22:51.15:0,51,1226	0/0:19,0:19:48.16:0,48,1218	0/0:1,0:1:3.01:0,3,79
chr10	83370111	.	G	GT	5355.61	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=0.490;DP=658;FS=6.507;HRun=1;HaplotypeScore=69.4500;InbreedingCoeff=0.9927;MQ=91.65;MQ0=0;MQRankSum=-2.486;QD=41.20;ReadPosRankSum=-1.200;VQSLOD=4.8469;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1267	0/0:4,0:4:12.04:0,12,156	0/0:27,0:27:75.21:0,75,940	0/0:26,0:26:72.10:0,72,907	0/0:22,0:22:60.19:0,60,779	0/0:20,0:20:57.19:0,57,740	0/0:19,0:19:54.18:0,54,699	1/1:0,27:27:78.26:1170,78,0	0/0:32,0:32:90.27:0,90,1151	0/0:19,0:19:57.19:0,57,740	0/0:17,0:17:48.12:0,48,605	0/0:26,0:26:72.23:0,72,935	0/0:29,0:29:84.26:0,84,1077	0/0:28,0:28:84.27:0,84,1091	0/0:37,0:37:99:0,108,1402	0/0:27,0:27:81.26:0,81,1051	0/0:23,0:23:66.21:0,66,856	0/0:18,0:18:54.18:0,54,698	1/1:1,17:18:54.17:771,54,0	1/1:0,12:12:30.10:450,30,0	1/1:1,48:50:99:1976,135,0	0/0:20,0:20:54.16:0,54,686	0/0:13,0:13:36.12:0,36,467	0/0:38,0:38:99:0,114,1461	0/0:18,0:18:54.17:0,54,688	0/0:16,0:16:48.15:0,48,612	1/1:1,22:22:66.22:989,66,0	0/0:15,0:15:39.13:0,39,506
chr10	83370777	.	CT	C	3853.46	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=7.407;DP=526;FS=2.653;HRun=10;HaplotypeScore=54.8056;InbreedingCoeff=0.9710;MQ=66.52;MQ0=5;MQRankSum=-1.261;QD=19.56;ReadPosRankSum=0.407;VQSLOD=4.5395;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,28:34:54.28:668,54,0	0/0:7,0:8:23.93:0,24,247	0/0:25,0:12:20.79:0,21,204	0/0:18,0:10:18.43:0,18,135	0/0:29,1:29:75.19:0,75,821	0/0:21,0:20:59.89:0,60,636	1/1:7,8:12:23.99:208,24,0	1/1:6,22:25:59.74:520,60,0	0/0:11,0:11:33.09:0,33,365	0/0:20,0:20:54.13:0,54,583	0/0:18,0:18:51.14:0,51,564	0/0:13,0:13:33.07:0,33,356	0/0:12,0:12:30.08:0,30,332	0/0:16,0:16:39.08:0,39,414	0/0:22,0:22:60.16:0,60,664	0/0:13,1:14:16.06:0,16,405	0/0:27,1:28:46.20:0,46,721	0/0:5,0:20:33.74:0,34,165	1/1:5,9:14:20.98:181,21,0	1/1:5,19:24:59.88:506,60,0	1/1:3,13:16:32.99:287,33,0	0/0:9,0:9:27.06:0,27,290	0/0:16,0:16:45.12:0,45,498	0/0:8,1:11:3.90:0,4,254	0/0:15,0:17:44.94:0,45,471	1/1:3,15:18:44.98:391,45,0	1/1:0,27:27:71.99:625,72,0	1/1:0,18:18:53.99:469,54,0
chr10	83371670	.	TA	T	914	PASS	AB=0.767;AC=15;AF=0.268;AN=56;BaseQRankSum=7.293;DP=541;FS=1.395;HRun=15;HaplotypeScore=75.5024;InbreedingCoeff=0.0572;MQ=72.05;MQ0=3;MQRankSum=0.276;QD=3.50;ReadPosRankSum=3.843;VQSLOD=0.3459;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:50:54.69:156,55,0	0/0:9,0:9:17.99:0,18,155	0/1:29,0:12:2.35:2,0,84	0/0:20,0:13:9.34:0,9,78	0/0:21,0:25:44.58:0,45,354	0/1:14,1:15:1.67:2,0,99	1/1:5,0:23:32.34:93,32,0	0/1:4,13:17:32.83:172,0,33	0/0:16,0:16:15.34:0,15,225	0/0:18,0:20:32.67:0,33,262	0/0:9,4:14:2.04:0,2,125	0/0:17,0:19:37.99:0,38,276	0/0:16,1:17:13.49:0,13,215	0/0:11,0:11:29.91:0,30,249	0/0:18,0:18:44.72:0,45,356	0/0:13,2:14:10.54:0,11,197	0/0:36,2:44:44.31:0,44,579	0/1:14,16:30:59.84:201,0,60	0/1:11,9:21:52.19:153,0,52	0/1:5,7:12:11.77:62,0,12	0/1:4,5:9:34.28:59,0,34	0/1:8,1:10:1.43:1,0,99	0/1:10,1:11:3.03:3,0,90	0/0:16,1:18:38.74:0,39,311	0/0:14,0:14:19.23:0,19,158	0/1:12,2:14:21.38:21,0,63	0/1:8,10:19:10.87:144,0,11	0/0:17,1:19:12.78:0,13,250
chr10	83372889	.	A	AGTGTGT	1841.47	PASS	AB=1.000;AC=12;AF=0.240;AN=50;BaseQRankSum=-0.810;DP=567;FS=0.617;HRun=0;HaplotypeScore=137.2771;InbreedingCoeff=0.5435;MQ=66.06;MQ0=5;MQRankSum=-3.654;QD=10.90;ReadPosRankSum=-2.360;VQSLOD=2.2715;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:29:4.35:0,4,70	0/0:4,0:4:8.86:0,9,131	./.	./.	0/0:19,0:22:39.12:0,39,702	0/1:16,0:16:1.08:1,0,303	1/1:17,0:22:8.69:166,9,0	1/1:29,0:29:36.97:557,37,0	0/0:17,0:17:21.02:0,21,355	0/0:20,0:20:1.18:0,1,456	0/0:10,0:10:9.03:0,9,175	0/0:13,0:13:15.03:0,15,239	0/0:13,0:11:14.92:0,15,284	0/0:17,0:17:30.09:0,30,516	0/0:12,0:11:3.01:0,3,53	0/0:16,0:16:24.02:0,24,374	0/0:19,0:19:42.10:0,42,752	0/1:26,0:26:1.38:196,0,1	1/1:16,0:15:14.96:303,15,0	1/1:29,0:29:16.19:690,16,0	./.	0/0:26,0:26:39.13:0,39,726	0/0:11,0:11:18.04:0,18,327	0/1:20,0:20:0:0,0,351	0/0:21,0:21:13.57:0,14,578	0/0:27,0:27:23.63:0,24,458	0/1:11,0:11:14.64:79,0,15	0/0:10,0:10:6.02:0,6,103
chr10	83372909	.	T	TGCGCGCGCGC	1171.29	PASS	AB=0.833;AC=3;AF=0.054;AN=56;BaseQRankSum=4.118;DP=557;FS=0.000;HRun=0;HaplotypeScore=182.6129;InbreedingCoeff=0.5233;MQ=52.37;MQ0=8;MQRankSum=-5.574;QD=24.40;ReadPosRankSum=0.085;VQSLOD=2.9856;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,4:20:17.49:260,0,17	0/0:8,0:8:24.08:0,24,768	0/0:16,0:5:12:0,12,213	0/0:16,0:6:9.03:0,9,212	0/0:28,0:28:69.24:0,69,2241	0/0:16,0:16:42.14:0,42,1358	1/1:27,1:28:9.39:1009,9,0	0/0:27,0:27:75.19:0,75,2043	0/0:13,0:13:36.12:0,36,1187	0/0:23,0:22:63.21:0,63,1958	0/0:13,0:13:21.53:0,22,630	0/0:15,0:14:18.95:0,19,1037	0/0:12,0:10:23.93:0,24,729	0/0:13,0:13:33.11:0,33,1096	0/0:16,0:15:30.10:0,30,945	0/0:11,0:11:33.10:0,33,1011	0/0:31,0:30:87.25:0,87,2578	0/0:27,0:27:70.15:0,70,1893	0/0:19,0:16:48.16:0,48,1132	0/0:28,0:28:63.20:0,63,1477	0/0:49,0:49:54.15:0,54,996	0/0:26,0:26:66.06:0,66,2090	0/0:13,0:13:36.12:0,36,1160	0/0:16,0:16:35.97:0,36,1050	0/0:25,0:25:54.18:0,54,1720	0/0:27,0:27:75.08:0,75,2078	0/0:14,0:13:31.87:0,32,753	0/0:7,0:7:6.02:0,6,188
chr10	83372919	.	TGTGC	T	792.91	PASS	AB=0.918;AC=15;AF=0.278;AN=54;BaseQRankSum=5.792;DP=483;FS=10.254;HRun=0;HaplotypeScore=105.4054;InbreedingCoeff=-0.0134;MQ=51.51;MQ0=6;MQRankSum=1.048;QD=3.25;ReadPosRankSum=-0.498;VQSLOD=1.3833;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:9.01:84,9,0	0/0:8,0:8:22.49:0,22,238	0/0:6,0:1:3.01:0,3,40	./.	0/0:28,0:28:22.87:0,23,471	0/0:16,0:16:38.95:0,39,621	0/1:20,0:20:21.83:66,0,22	0/0:22,0:22:11.89:0,12,284	0/0:11,0:11:30.82:0,31,294	0/0:23,0:22:39:0,39,682	0/0:15,0:15:2.55:0,3,144	0/0:14,0:13:20.65:0,21,333	0/0:11,0:9:19.79:0,20,195	0/1:13,0:13:21.35:21,0,317	0/1:13,0:13:2.02:2,0,94	0/0:10,0:10:23.60:0,24,225	0/0:31,0:30:67.34:0,67,1010	0/1:25,0:25:36.10:36,0,251	0/1:18,0:15:80.14:80,0,117	0/1:24,0:24:6.21:6,0,416	1/1:37,0:37:1.62:151,2,0	0/1:24,0:24:38.39:38,0,509	0/1:11,0:11:3.93:4,0,329	0/0:14,0:14:12.54:0,13,475	0/0:24,0:24:29.57:0,30,502	0/1:5,16:21:0.09:341,0,0	0/1:12,0:11:58.08:58,0,130	0/1:1,7:8:16.96:53,0,17
chr10	83372921	.	TGC	T	1018.74	PASS	AB=0.987;AC=27;AF=0.519;AN=52;BaseQRankSum=8.006;DP=475;FS=6.809;HRun=0;HaplotypeScore=86.7005;InbreedingCoeff=0.1821;MQ=52.77;MQ0=6;MQRankSum=-0.698;QD=3.10;ReadPosRankSum=-0.987;VQSLOD=1.2894;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:8.52:42,9,0	0/1:9,0:9:13.92:14,0,105	./.	./.	0/1:28,0:28:13.40:13,0,147	0/1:15,0:15:4.47:4,0,228	1/1:22,0:22:11.38:58,11,0	1/1:21,0:21:5.95:41,6,0	0/0:10,0:10:6.85:0,7,52	0/0:22,0:21:9.83:0,10,230	0/1:15,0:15:9.20:9,0,25	0/0:13,0:12:2.73:0,3,96	0/1:11,0:9:9.93:10,0,39	0/1:13,0:13:4.90:5,0,130	0/0:11,0:11:9.77:0,10,63	1/1:8,1:9:3.01:36,3,0	0/0:29,2:30:18.27:0,18,447	1/1:21,3:24:29.79:245,30,0	1/1:17,0:14:14.92:111,15,0	0/1:24,0:24:65.09:65,0,77	1/1:37,0:37:23.85:176,24,0	0/0:24,0:24:8.30:0,8,226	0/0:10,0:10:0.89:0,1,113	0/0:14,0:14:12.48:0,12,229	0/1:24,1:25:15.63:16,0,166	1/1:21,0:21:26.96:229,27,0	0/1:11,1:11:23.52:89,0,24	1/1:8,0:8:3:25,3,0
chr10	83372934	.	GCGCGCGCGCT	G	658.32	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=5.034;DP=435;FS=2.614;HRun=0;HaplotypeScore=136.2500;InbreedingCoeff=0.8779;MQ=59.51;MQ0=3;MQRankSum=-5.422;QD=15.31;ReadPosRankSum=1.371;VQSLOD=2.6180;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:9.03:289,9,0	0/0:13,0:13:39.10:0,39,1275	./.	0/0:3,0:3:7.55:0,8,101	0/0:23,0:23:66.22:0,66,2134	0/0:16,0:16:45.13:0,45,1645	1/1:3,21:24:18.53:480,19,0	0/0:13,0:13:26.78:0,27,346	0/0:6,0:6:18.06:0,18,620	0/0:23,0:22:63.16:0,63,2294	0/0:18,0:18:33.09:0,33,787	0/0:12,0:11:30.09:0,30,1025	0/0:7,0:7:18.03:0,18,416	0/0:9,0:9:24.03:0,24,814	0/0:9,0:9:21.04:0,21,692	0/0:6,0:6:15.05:0,15,451	0/0:34,0:33:90.29:0,90,3646	0/0:20,0:20:19.10:0,19,621	0/0:15,0:14:42:0,42,599	0/0:25,0:25:59.98:0,60,1205	0/0:27,0:27:50.29:0,50,529	0/0:21,0:21:53.64:0,54,1989	0/0:13,0:13:33.10:0,33,1137	0/0:16,0:16:42.08:0,42,1399	0/0:21,0:21:48.15:0,48,1623	0/0:18,0:18:48.14:0,48,1075	0/0:14,0:13:32.64:0,33,554	0/0:8,0:8:9.02:0,9,146
chr10	83374034	.	CA	C	3727.34	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.660;DP=495;FS=3.252;HRun=10;HaplotypeScore=50.5460;InbreedingCoeff=0.9190;MQ=72.87;MQ0=0;MQRankSum=0.622;QD=19.02;ReadPosRankSum=-1.107;VQSLOD=4.0813;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,30:35:80.93:696,81,0	0/0:3,0:3:6.02:0,6,66	1/1:10,0:10:2.77:7,3,0	0/0:8,0:8:12.03:0,12,131	0/0:29,0:29:75.16:0,75,794	0/0:15,0:15:42.08:0,42,442	1/1:0,26:26:74.99:651,75,0	1/1:3,23:26:65.94:566,66,0	0/0:18,0:18:48.12:0,48,524	0/0:18,0:18:48.12:0,48,525	0/0:17,1:18:16.03:0,16,388	0/0:11,0:11:30.08:0,30,332	0/0:16,0:16:45.09:0,45,478	0/0:18,0:18:48.09:0,48,518	0/0:18,0:18:48.13:0,48,531	0/0:22,0:22:66.15:0,66,706	0/0:23,0:23:66.15:0,66,714	1/1:5,14:19:38.94:332,39,0	1/1:5,12:18:4.82:259,5,0	1/1:4,14:18:11.81:331,12,0	1/1:1,20:21:50.99:443,51,0	0/0:7,0:7:12.03:0,12,131	0/0:15,0:15:45.12:0,45,498	0/0:16,0:17:44.95:0,45,479	0/0:17,0:17:39.11:0,39,431	0/0:20,0:20:39.11:0,39,432	1/1:4,19:23:50.68:442,51,0	0/0:6,0:6:18.05:0,18,199
chr10	83374289	.	G	GT	2413.28	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-8.529;DP=403;FS=2.940;HRun=7;HaplotypeScore=37.7336;InbreedingCoeff=0.9616;MQ=69.98;MQ0=0;MQRankSum=1.133;QD=27.74;ReadPosRankSum=-3.054;VQSLOD=2.8222;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.10:0,66,637	0/0:5,0:5:15.02:0,15,141	0/0:9,0:9:18.02:0,18,174	0/0:7,0:6:15.02:0,15,148	0/0:22,0:22:63.04:0,63,587	0/0:12,0:11:33.04:0,33,315	0/0:5,0:5:9.01:0,9,86	1/1:5,24:29:72.15:827,72,0	0/0:8,0:8:21.03:0,21,199	0/0:25,0:25:57.08:0,57,550	0/0:18,0:18:54.08:0,54,516	0/0:10,0:10:24.04:0,24,232	0/0:11,0:11:29.25:0,29,288	0/0:10,0:10:27.04:0,27,261	0/0:10,0:10:24.03:0,24,232	0/0:7,0:7:15.02:0,15,145	0/0:29,0:29:81.12:0,81,782	0/0:20,0:20:48.06:0,48,457	1/1:5,9:14:27.05:311,27,0	1/1:2,15:17:42.13:507,42,0	1/1:1,7:8:21.06:254,21,0	0/0:5,0:5:12.02:0,12,116	0/0:8,0:8:21.03:0,21,203	0/0:8,0:8:21.03:0,21,203	0/0:21,0:21:48.06:0,48,464	0/0:22,0:22:60.09:0,60,576	1/1:0,19:19:57.17:689,57,0	0/0:19,0:19:51.08:0,51,492
chr10	83374424	.	C	CT	1030.82	PASS	AB=0.943;AC=17;AF=0.327;AN=52;BaseQRankSum=-4.702;DP=278;FS=5.151;HRun=10;HaplotypeScore=32.3875;InbreedingCoeff=0.6643;MQ=58.51;MQ0=5;MQRankSum=-0.894;QD=9.29;ReadPosRankSum=-1.409;VQSLOD=0.8690;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:8:5.72:29,6,0	0/0:5,0:5:11.96:0,12,96	0/0:7,0:3:2.99:0,3,25	0/1:8,0:4:4.57:5,0,16	0/0:13,0:12:23.95:0,24,193	0/1:7,1:9:8.97:9,0,131	1/1:2,2:6:8.25:55,8,0	1/1:8,13:21:17.41:371,17,0	0/0:4,0:4:8.98:0,9,74	0/0:8,0:8:20.96:0,21,172	0/0:8,0:8:17.97:0,18,148	0/0:6,0:6:17.98:0,18,148	0/0:6,0:6:8.98:0,9,74	0/1:12,1:12:8.02:8,0,148	0/0:11,0:11:29.95:0,30,243	0/0:7,0:7:14.96:0,15,123	0/0:26,0:26:14.02:0,14,354	0/0:22,0:23:36.99:0,37,279	1/1:7,10:15:27.07:287,27,0	1/1:1,5:6:12.03:128,12,0	1/1:7,4:9:9.02:96,9,0	./.	./.	0/0:7,0:7:11.98:0,12,99	0/0:8,0:8:23.94:0,24,192	0/0:13,0:13:29.93:0,30,242	1/1:3,7:10:21.05:224,21,0	0/0:13,0:13:29.95:0,30,246
chr10	83374511	.	AT	A	1441.72	PASS	AB=0.675;AC=16;AF=0.308;AN=52;BaseQRankSum=3.852;DP=262;FS=1.865;HRun=10;HaplotypeScore=35.8009;InbreedingCoeff=0.7265;MQ=53.81;MQ0=11;MQRankSum=-0.843;QD=15.02;ReadPosRankSum=-0.168;VQSLOD=3.0293;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:16:35.98:312,36,0	0/1:2,1:3:17.03:17,0,57	./.	0/0:11,0:5:11.24:0,11,104	0/0:14,0:14:36.09:0,36,393	0/0:9,0:9:21.06:0,21,232	1/1:1,6:6:18:156,18,0	1/1:1,14:15:27.81:321,28,0	0/0:4,0:4:9.02:0,9,100	0/0:7,0:6:18.04:0,18,191	0/0:9,0:9:21.06:0,21,232	0/0:2,0:2:6.02:0,6,66	0/0:5,0:5:12.03:0,12,133	0/0:4,0:4:12.03:0,12,133	0/0:10,0:10:20.92:0,21,214	0/0:12,0:12:28.60:0,29,290	0/0:18,0:18:48.13:0,48,531	1/1:2,6:8:17.98:156,18,0	1/1:12,10:18:35.19:293,35,0	0/1:2,4:6:18.18:89,0,18	1/1:2,8:7:8.99:78,9,0	./.	0/0:6,0:6:18.05:0,18,198	0/0:11,0:11:30.08:0,30,332	0/0:14,0:15:41.95:0,42,446	0/0:16,0:15:27.94:0,28,289	1/1:1,8:9:23.99:207,24,0	0/0:9,1:9:1.02:0,1,239
chr10	83374558	.	AT	A	436.68	PASS	AB=0.853;AC=13;AF=0.241;AN=54;BaseQRankSum=0.383;DP=264;FS=1.494;HRun=14;HaplotypeScore=40.8864;InbreedingCoeff=0.3572;MQ=65.51;MQ0=16;MQRankSum=-1.228;QD=4.46;ReadPosRankSum=-0.161;VQSLOD=0.3542;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:14:20.99:0,21,116	0/0:3,0:3:8.38:0,8,64	0/0:16,1:7:6.01:0,6,56	0/1:15,0:7:5.65:6,0,19	0/1:9,2:11:26.51:27,0,128	0/0:5,0:5:6.01:0,6,56	0/0:3,0:5:8.48:0,8,41	1/1:11,7:15:20.74:143,21,0	0/0:5,0:4:5.96:0,6,47	0/0:8,0:6:6.01:0,6,56	0/1:6,2:9:20.35:20,0,96	0/0:2,0:2:5.84:0,6,42	0/1:5,0:4:5.52:6,0,39	0/0:3,0:3:6.01:0,6,56	0/0:11,0:11:21.02:0,21,194	0/0:6,0:6:6.01:0,6,56	0/0:24,1:24:28.39:0,28,430	0/0:3,0:10:18.26:0,18,122	1/1:8,8:16:29.69:203,30,0	1/1:4,2:6:5.93:41,6,0	0/1:2,3:5:18.87:32,0,19	./.	0/0:5,0:5:9.01:0,9,84	0/0:12,0:12:20.77:0,21,180	0/0:8,0:8:21.02:0,21,195	0/0:6,0:12:6.69:0,7,118	1/1:6,4:10:16.88:121,17,0	0/0:1,0:7:19.88:0,20,99
chr10	83375155	.	GGGTGT	G	712.22	PASS	AB=0.925;AC=12;AF=0.231;AN=52;BaseQRankSum=1.547;DP=186;FS=14.942;HRun=0;HaplotypeScore=43.6303;InbreedingCoeff=0.3461;MQ=68.27;MQ0=4;MQRankSum=-5.627;QD=10.32;ReadPosRankSum=-1.238;VQSLOD=0.4061;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:8:9.17:103,0,9	./.	0/0:16,0:8:22.23:0,22,327	0/0:20,0:13:26.74:0,27,445	0/0:5,0:5:12.03:0,12,237	0/0:5,0:5:6.02:0,6,117	0/1:21,0:20:60.74:129,0,61	1/1:6,7:11:20.88:274,21,0	0/0:7,0:7:18.06:0,18,455	0/0:3,0:3:6.02:0,6,132	./.	0/0:5,0:5:15.01:0,15,322	0/0:3,0:3:6.02:0,6,162	0/0:3,0:3:6.02:0,6,175	0/0:2,0:2:6.02:0,6,163	0/0:5,0:5:15.05:0,15,430	0/0:21,0:21:39.59:0,40,830	0/1:6,0:6:5.64:99,0,6	0/1:4,3:7:19.74:91,0,20	1/1:3,0:3:2.98:22,3,0	1/1:9,0:9:8.91:63,9,0	0/0:2,0:2:3.01:0,3,50	0/0:1,0:1:3.01:0,3,50	0/0:4,0:4:9.02:0,9,187	0/0:2,0:2:3.01:0,3,88	0/0:3,0:3:9.03:0,9,170	1/1:2,0:2:5.99:81,6,0	0/0:10,0:10:18.13:0,18,356
chr10	83375156	.	GGTGT	G	965.97	PASS	AB=0.955;AC=15;AF=0.288;AN=52;BaseQRankSum=1.681;DP=180;FS=15.355;HRun=0;HaplotypeScore=38.6401;InbreedingCoeff=0.6552;MQ=69.01;MQ0=5;MQRankSum=-6.194;QD=14.42;ReadPosRankSum=-2.051;VQSLOD=1.0847;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:11.94:117,12,0	./.	0/0:15,0:8:16.66:0,17,272	0/0:18,0:12:21.06:0,21,393	0/0:5,0:5:9.03:0,9,187	0/0:5,0:5:6.02:0,6,106	0/1:20,1:20:0.21:157,0,0	1/1:13,0:11:20.96:269,21,0	0/0:7,0:7:18.06:0,18,390	0/0:3,0:3:6.02:0,6,116	./.	0/0:5,0:5:12.04:0,12,244	0/0:2,0:2:6.02:0,6,134	0/0:3,0:3:6.02:0,6,149	0/0:2,0:2:6.02:0,6,140	0/0:5,0:5:15.05:0,15,358	0/0:22,0:22:39.12:0,39,717	1/1:4,1:5:12.01:147,12,0	1/1:8,0:7:9.03:142,9,0	1/1:2,0:2:3.01:53,3,0	1/1:1,7:8:9.03:159,9,0	0/0:2,0:2:3.01:0,3,50	0/0:1,0:1:3.01:0,3,50	0/0:3,0:3:6.02:0,6,136	0/0:2,0:2:3.01:0,3,73	0/0:3,0:3:9.03:0,9,159	1/1:2,0:2:6.02:88,6,0	0/0:10,0:10:18.12:0,18,290
chr10	83375157	.	GTGT	G	976.56	PASS	AB=0.900;AC=16;AF=0.308;AN=52;BaseQRankSum=1.778;DP=173;FS=16.014;HRun=0;HaplotypeScore=33.9050;InbreedingCoeff=0.5703;MQ=67.38;MQ0=4;MQRankSum=-5.448;QD=13.02;ReadPosRankSum=-1.802;VQSLOD=0.9240;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,2:7:12.04:156,12,0	./.	0/1:13,0:7:8.75:9,0,225	0/0:17,0:12:27:0,27,423	0/0:4,0:4:9.03:0,9,171	0/0:6,0:6:9.03:0,9,153	1/1:14,4:18:26.38:316,26,0	1/1:11,1:10:21.06:263,21,0	0/0:7,0:7:18.06:0,18,332	0/0:3,0:3:6.02:0,6,96	./.	0/0:5,0:5:12.02:0,12,211	0/0:2,0:2:6.02:0,6,100	0/0:3,0:3:6.02:0,6,128	0/0:3,0:3:6.02:0,6,124	0/0:5,0:5:15.05:0,15,314	0/0:18,0:21:17.07:0,17,572	1/1:4,0:5:12.03:146,12,0	0/1:6,2:7:10.88:78,0,11	1/1:0,0:1:3.01:30,3,0	1/1:7,1:8:9.02:90,9,0	0/0:2,0:2:3.01:0,3,50	0/0:1,0:1:3.01:0,3,50	0/0:3,0:3:6:0,6,129	0/0:2,0:2:3.01:0,3,61	0/0:4,0:4:12.04:0,12,209	1/1:0,0:2:6.01:59,6,0	0/0:7,0:10:17.86:0,18,228
chr10	83375659	.	GGCCT	G	1865.21	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=3.084;DP=450;FS=1.923;HRun=0;HaplotypeScore=90.6057;InbreedingCoeff=0.9147;MQ=76.13;MQ0=10;MQRankSum=2.924;QD=29.61;ReadPosRankSum=-0.672;VQSLOD=3.4907;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:47.53:0,48,437	0/0:3,0:3:9.03:0,9,148	0/0:29,0:17:44.80:0,45,702	0/0:40,0:22:25.13:0,25,701	0/0:15,0:15:42.12:0,42,644	0/0:16,0:16:48.13:0,48,736	0/0:30,0:30:7.15:0,7,286	1/1:2,20:22:60.16:865,60,0	0/0:13,0:13:33.08:0,33,550	0/0:18,0:17:51.17:0,51,961	0/0:11,0:11:24.07:0,24,380	0/0:12,0:12:33.87:0,34,447	0/0:14,0:14:39.08:0,39,575	0/0:9,0:9:26.96:0,27,391	0/0:15,0:15:42.08:0,42,665	0/0:7,0:7:21.02:0,21,329	0/0:16,0:16:48.15:0,48,839	1/1:5,0:5:2.29:6,2,0	1/1:1,10:11:30.10:491,30,0	./.	1/1:21,0:21:30.09:465,30,0	0/0:12,0:12:36.11:0,36,547	0/0:13,0:12:33:0,33,503	0/0:27,0:27:47.74:0,48,668	0/0:11,0:11:30.08:0,30,487	0/0:14,0:14:38.86:0,39,641	1/1:4,0:4:12.04:197,12,0	0/0:13,0:13:39.09:0,39,561
chr10	83375661	.	CCT	C	66.45	PASS	AB=0.773;AC=8;AF=0.148;AN=54;BaseQRankSum=8.056;DP=501;FS=6.824;HRun=0;HaplotypeScore=89.0102;InbreedingCoeff=0.5734;MQ=71.59;MQ0=10;MQRankSum=3.553;QD=0.99;ReadPosRankSum=-0.208;VQSLOD=1.1460;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:54.14:0,54,376	0/0:3,0:3:9.03:0,9,150	0/0:29,0:17:46.42:0,46,662	0/0:39,0:21:43.44:0,43,691	0/0:19,0:18:42.14:0,42,689	0/0:22,0:22:48.13:0,48,728	0/0:34,0:34:29.67:0,30,209	0/1:23,0:23:33.57:34,0,72	0/0:12,0:12:30.10:0,30,484	0/0:26,0:23:67.48:0,67,1024	0/0:13,0:13:24.07:0,24,378	0/0:14,0:14:34.93:0,35,473	0/0:15,0:15:36.10:0,36,545	0/0:15,0:15:27.08:0,27,378	0/0:16,0:16:42.09:0,42,615	0/0:8,0:8:21.03:0,21,307	0/0:17,0:17:48.63:0,49,753	0/1:1,5:6:28.41:77,0,28	1/1:11,0:11:3.88:36,4,0	./.	1/1:21,0:21:10.34:34,10,0	0/0:13,0:13:36.10:0,36,546	0/0:13,0:12:33:0,33,515	0/0:28,0:28:48.46:0,48,645	0/0:9,0:9:27.09:0,27,439	0/0:19,0:19:50.98:0,51,744	1/1:6,0:6:4.78:17,5,0	0/0:16,0:16:42.41:0,42,564
chr10	83376292	.	TC	T	4584.61	PASS	AB=1.000;AC=52;AF=0.929;AN=56;BaseQRankSum=-0.938;DP=244;FS=15.409;HRun=2;HaplotypeScore=173.2784;InbreedingCoeff=0.2191;MQ=69.10;MQ0=0;MQRankSum=-1.642;QD=18.87;ReadPosRankSum=2.820;VQSLOD=3.3239;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,12:16:24.27:312,24,0	1/1:0,3:3:8.51:83,9,0	0/1:5,0:5:4.47:4,0,43	0/1:9,0:10:9.61:93,0,10	1/1:1,8:8:18.03:210,18,0	1/1:4,9:13:26.45:308,26,0	1/1:4,4:8:12.04:144,12,0	1/1:3,6:9:17.98:188,18,0	1/1:4,8:12:23.35:228,23,0	1/1:3,9:12:23.57:258,24,0	1/1:2,5:7:11.90:128,12,0	1/1:3,8:11:20.87:228,21,0	1/1:1,9:10:25.22:253,25,0	1/1:1,6:7:17.79:199,18,0	1/1:3,7:10:14.12:107,14,0	1/1:1,6:7:19.30:228,19,0	1/1:4,7:11:14.66:132,15,0	1/1:2,1:3:3.01:36,3,0	1/1:2,3:5:8.39:82,8,0	1/1:6,9:15:20.86:291,21,0	1/1:8,4:12:12.01:125,12,0	1/1:0,4:4:11.95:129,12,0	1/1:0,4:4:12.04:150,12,0	1/1:5,7:12:17.34:193,17,0	1/1:2,3:5:3.90:39,4,0	1/1:5,11:16:23:279,23,0	1/1:1,6:7:14.07:156,14,0	0/0:0,1:1:0.89:0,1,2
chr10	83376326	.	A	AGT	124.08	PASS	AB=0.500;AC=28;AF=0.737;AN=38;BaseQRankSum=-0.240;DP=37;FS=0.000;HRun=0;HaplotypeScore=108.8265;InbreedingCoeff=0.3189;MQ=28.74;MQ0=0;MQRankSum=-0.360;QD=4.00;ReadPosRankSum=0.300;VQSLOD=2.0224;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:4.47:27,4,0	1/1:0,1:1:2.80:13,3,0	./.	./.	1/1:0,1:1:2.74:12,3,0	1/1:0,1:1:2.68:11,3,0	./.	./.	1/1:0,3:3:2.80:7,3,0	0/0:0,2:2:2.50:0,2,9	1/1:0,1:1:2.88:15,3,0	1/1:1,1:2:2.49:6,2,0	1/1:0,4:4:8.61:54,9,0	1/1:0,1:1:2.60:10,3,0	1/1:0,5:5:5.95:19,6,0	./.	1/1:0,1:1:2.68:11,3,0	./.	0/0:0,1:1:2.50:0,2,9	0/0:0,1:1:0.47:0,0,1	./.	./.	./.	1/1:0,1:1:1.82:5,2,0	0/1:0,2:2:0.18:0,0,0	1/1:0,4:4:5.65:28,6,0	0/0:0,2:2:2.74:0,3,12	0/1:0,1:1:0:0,0,0
chr10	83376340	.	CGTTTT	C	73.97	PASS	AC=26;AF=0.684;AN=38;BaseQRankSum=1.151;DP=36;FS=6.990;HRun=0;HaplotypeScore=109.5574;InbreedingCoeff=0.3142;MQ=28.73;MQ0=0;MQRankSum=-0.113;QD=2.74;ReadPosRankSum=0.519;VQSLOD=1.5993;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:0,3:3:0.73:0,1,26	1/1:0,1:1:2.96:19,3,0	./.	./.	0/0:0,1:1:2.68:0,3,11	1/1:0,1:1:2.94:18,3,0	./.	./.	1/1:0,3:3:4.36:11,4,0	0/0:0,2:2:3.38:0,3,11	1/1:0,1:1:2.88:15,3,0	1/1:1,1:2:3.38:11,3,0	1/1:0,3:3:5.30:16,5,0	1/1:0,1:1:2.60:10,3,0	1/1:0,5:5:8.17:30,8,0	./.	1/1:0,1:1:2.94:18,3,0	./.	0/0:0,1:1:2.92:0,3,17	0/0:0,1:1:0.89:0,1,2	./.	./.	./.	0/0:0,1:1:1.25:0,1,3	1/1:0,2:2:1.57:5,2,0	1/1:0,4:4:1.42:14,1,0	1/1:0,2:2:1.55:4,2,0	1/1:0,1:1:2.22:7,2,0
chr10	83376362	.	GA	G	2124.86	PASS	AB=0.500;AC=47;AF=0.940;AN=50;BaseQRankSum=-1.789;DP=127;FS=0.000;HRun=2;HaplotypeScore=124.3179;InbreedingCoeff=0.1600;MQ=28.77;MQ0=0;MQRankSum=-0.635;QD=16.86;ReadPosRankSum=0.614;VQSLOD=3.6095;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:0,4:4:0.01:30,0,0	1/1:0,7:7:17.26:169,17,0	./.	./.	1/1:0,6:6:3:32,3,0	1/1:0,3:3:8.05:76,8,0	1/1:1,8:9:17.34:181,17,0	1/1:0,8:9:27.08:306,27,0	1/1:0,4:4:2.78:6,3,0	1/1:0,8:8:17.55:172,18,0	1/1:0,4:4:4.02:45,4,0	1/1:0,4:4:2.76:45,3,0	1/1:0,5:5:4.18:47,4,0	1/1:0,6:6:14.53:149,15,0	1/1:0,5:5:6.39:24,6,0	./.	1/1:0,1:1:2.04:6,2,0	1/1:0,3:3:9.03:105,9,0	1/1:1,7:8:17.35:177,17,0	1/1:0,10:10:19.87:227,20,0	1/1:0,3:3:0.94:2,1,0	1/1:0,2:2:6.02:70,6,0	1/1:0,4:4:3.89:37,4,0	0/0:0,1:1:0:0,0,0	1/1:0,6:6:2.30:90,2,0	1/1:0,7:7:6.09:97,6,0	1/1:0,2:2:2.04:6,2,0	1/1:0,6:6:7.75:99,8,0
chr10	83377093	.	GT	G	439.92	PASS	AB=0.921;AC=7;AF=0.125;AN=56;BaseQRankSum=5.413;DP=410;FS=3.242;HRun=10;HaplotypeScore=51.2921;InbreedingCoeff=0.5298;MQ=81.13;MQ0=0;MQRankSum=-0.906;QD=8.15;ReadPosRankSum=0.214;VQSLOD=1.5422;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.14:0,78,823	0/0:9,0:9:27.07:0,27,299	0/1:17,0:16:16.01:16,0,126	0/0:17,0:13:17.41:0,17,137	0/0:16,0:16:39.09:0,39,423	0/0:13,0:13:36.10:0,36,398	0/1:6,1:7:8.02:8,0,139	0/0:32,0:32:54.64:0,55,762	0/0:8,0:8:21.06:0,21,232	0/0:21,1:22:31.10:0,31,565	0/0:15,0:15:42.11:0,42,462	0/0:15,0:15:45.11:0,45,489	0/0:10,0:10:30.08:0,30,331	0/0:7,0:7:12.03:0,12,133	0/0:7,0:7:18.05:0,18,199	0/0:7,0:7:15.03:0,15,157	0/0:26,0:28:74.87:0,75,792	0/0:14,0:14:33.04:0,33,343	0/0:13,0:13:24.06:0,24,258	0/0:21,0:21:57:0,57,599	0/0:15,0:15:24.06:0,24,266	0/0:7,0:7:15.04:0,15,166	0/1:7,1:8:1.99:2,0,208	0/0:7,0:7:18.05:0,18,199	0/0:21,2:23:7.99:0,8,530	1/1:3,13:16:44.98:391,45,0	0/0:20,1:21:25.07:0,25,496	1/1:0,6:6:18:156,18,0
chr10	83377134	.	AT	A	744.91	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=1.136;DP=292;FS=3.608;HRun=7;HaplotypeScore=46.2048;InbreedingCoeff=0.7843;MQ=62.20;MQ0=1;MQRankSum=2.688;QD=19.60;ReadPosRankSum=0.037;VQSLOD=2.9984;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:22:38.27:450,38,0	0/0:4,0:4:12.04:0,12,151	0/0:12,0:7:6.68:0,7,86	0/0:7,0:5:5.12:0,5,102	0/0:8,0:8:21.07:0,21,264	0/0:16,0:16:45.14:0,45,555	1/1:2,1:3:6.01:61,6,0	0/0:27,0:27:73.66:0,74,433	0/0:5,0:5:11.25:0,11,120	0/0:10,0:10:27.08:0,27,329	0/0:13,0:13:33.11:0,33,415	0/0:9,0:9:27.09:0,27,339	0/0:8,0:8:18.06:0,18,226	0/0:7,0:7:18.06:0,18,226	0/0:5,0:5:12.03:0,12,137	0/0:2,0:2:6.02:0,6,75	0/0:34,0:34:93.30:0,93,1170	1/1:0,13:13:36.08:367,36,0	0/0:9,0:9:25.51:0,26,152	0/0:13,0:13:29.39:0,29,185	0/0:6,0:6:14.69:0,15,92	0/0:2,0:2:6.02:0,6,75	./.	0/0:6,0:6:18.06:0,18,226	0/0:12,0:12:36.10:0,36,440	0/0:5,0:17:34.33:0,34,174	0/0:11,0:11:32.24:0,32,194	0/0:0,0:11:31.35:0,31,159
chr10	83377141	.	T	TA	2313.42	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=-5.015;DP=288;FS=0.000;HRun=2;HaplotypeScore=37.3423;InbreedingCoeff=0.6291;MQ=61.66;MQ0=3;MQRankSum=-3.160;QD=23.37;ReadPosRankSum=0.196;VQSLOD=3.1912;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:29.11:0,29,209	0/0:5,0:5:15:0,15,168	0/0:12,0:7:6.01:0,6,36	0/0:7,0:5:11.01:0,11,90	0/0:7,0:7:21.07:0,21,259	0/0:16,0:16:45.11:0,45,529	0/0:2,0:2:5.72:0,6,30	1/1:4,25:27:74.93:1029,75,0	0/1:4,0:4:4.91:5,0,87	0/0:10,0:10:30.08:0,30,353	0/0:12,0:12:33.10:0,33,407	0/0:9,0:9:24.07:0,24,296	0/0:6,0:6:18.06:0,18,222	0/0:6,0:6:18.06:0,18,222	0/0:5,0:5:15.02:0,15,160	0/0:3,0:3:6.02:0,6,74	0/0:35,0:35:99:0,102,1223	0/0:14,0:14:37.47:0,37,203	1/1:1,8:9:24.07:320,24,0	1/1:3,9:12:24.08:336,24,0	1/1:0,4:4:12.04:168,12,0	0/0:2,0:2:6.02:0,6,74	./.	0/0:6,0:6:18.06:0,18,222	0/0:12,0:12:33.08:0,33,394	0/1:14,0:14:14.66:108,0,15	1/1:0,11:11:30.10:419,30,0	0/1:16,0:16:67.71:105,0,68
chr10	83377402	.	A	AC	368.28	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-3.156;DP=236;FS=1.461;HRun=8;HaplotypeScore=26.0861;InbreedingCoeff=0.6049;MQ=66.88;MQ0=2;MQRankSum=0.235;QD=11.51;ReadPosRankSum=-0.185;VQSLOD=0.9828;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:24.07:277,24,0	0/0:3,0:3:6:0,6,55	0/0:11,0:6:8.87:0,9,69	0/0:9,0:7:6:0,6,54	0/0:15,0:15:44.97:0,45,402	0/0:7,0:7:17.96:0,18,157	1/1:3,9:12:17.45:207,17,0	0/0:9,0:9:17.90:0,18,148	0/0:9,0:9:27.01:0,27,247	0/0:4,0:4:9:0,9,82	0/0:7,0:7:21.01:0,21,191	0/0:7,0:7:20.96:0,21,182	0/0:8,0:8:23.97:0,24,208	0/0:12,0:12:30.01:0,30,274	0/0:9,0:9:24.01:0,24,219	0/0:7,0:7:21.01:0,21,192	0/0:10,0:10:27.01:0,27,247	0/0:4,0:4:11.96:0,12,101	0/0:9,0:9:14.83:0,15,137	0/0:3,0:3:5.99:0,6,50	0/0:15,0:15:33:0,33,301	0/1:5,0:6:7.54:8,0,93	0/0:7,0:7:18.01:0,18,165	0/0:9,0:9:24.01:0,24,220	0/0:2,0:2:5.99:0,6,50	0/0:14,0:14:42.01:0,42,377	0/0:10,0:9:21.01:0,21,192	0/0:4,0:4:12.01:0,12,110
chr10	83377643	.	CA	C	2082.27	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=12.038;DP=595;FS=1.066;HRun=2;HaplotypeScore=59.0475;InbreedingCoeff=0.9918;MQ=51.08;MQ0=57;MQRankSum=-5.486;QD=16.93;ReadPosRankSum=-4.498;VQSLOD=2.3198;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:46:99:0,129,1926	0/0:8,0:6:18.06:0,18,270	./.	./.	0/0:15,0:13:33.11:0,33,495	0/0:20,0:20:60.20:0,60,889	0/0:18,0:15:42.14:0,42,620	1/1:5,27:26:78.05:894,78,0	0/0:12,0:10:30.10:0,30,450	0/0:24,0:17:48.15:0,48,701	0/0:12,0:10:27.09:0,27,405	0/0:19,0:19:57.17:0,57,807	0/0:8,0:7:21.07:0,21,313	0/0:23,0:22:66.22:0,66,981	0/0:23,0:23:69.22:0,69,1004	0/0:24,0:23:69.21:0,69,994	0/0:38,0:32:93.24:0,93,1343	0/0:41,0:41:99:0,111,1641	1/1:6,13:12:33.07:382,33,0	1/1:1,19:15:24.07:293,24,0	1/1:11,10:12:27.04:316,27,0	0/0:17,0:13:36.12:0,36,540	0/0:17,0:14:42.14:0,42,628	0/0:47,0:41:99:0,120,1695	0/0:10,0:10:27.08:0,27,388	0/0:38,0:33:90.30:0,90,1347	1/1:2,29:22:30.02:369,30,0	0/0:9,0:8:15.05:0,15,225
chr10	83378880	.	CA	C	1054.87	PASS	AB=0.938;AC=21;AF=0.375;AN=56;BaseQRankSum=12.730;DP=538;FS=7.002;HRun=12;HaplotypeScore=93.5538;InbreedingCoeff=0.8265;MQ=70.10;MQ0=0;MQRankSum=-4.127;QD=4.95;ReadPosRankSum=0.538;VQSLOD=1.9555;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:41.58:295,42,0	0/0:10,0:12:12.95:0,13,280	0/0:19,0:13:10.49:0,10,74	0/1:14,1:13:7.98:8,0,81	0/0:26,0:27:62.96:0,63,622	0/0:14,1:15:9.83:0,10,281	1/1:12,1:13:35.71:208,36,0	1/1:26,0:26:4.02:58,4,0	0/0:17,0:18:50.89:0,51,483	0/0:18,1:21:33.38:0,33,484	0/0:16,1:17:21.82:0,22,387	0/0:18,1:19:4.68:0,5,400	0/0:13,1:14:12.73:0,13,278	0/0:15,0:15:30.04:0,30,288	0/0:8,0:8:18.03:0,18,177	0/0:16,2:18:21.67:0,22,376	0/0:20,1:21:30.85:0,31,484	1/1:3,14:17:38.84:302,39,0	1/1:18,0:18:21.83:62,22,0	1/1:14,0:14:17.86:69,18,0	1/1:15,0:15:16.60:60,17,0	0/0:22,2:24:7.94:0,8,438	0/0:23,0:25:59.57:0,60,550	0/0:22,0:23:24.91:0,25,414	0/0:27,0:28:48.64:0,49,620	1/1:27,0:27:5.50:74,6,0	1/1:25,0:25:34.13:106,34,0	1/1:8,0:8:7.27:21,7,0
chr10	83378888	.	AAAAAC	A	4108.45	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=9.848;DP=563;FS=7.295;HRun=0;HaplotypeScore=129.6264;InbreedingCoeff=0.8959;MQ=71.32;MQ0=0;MQRankSum=-5.143;QD=21.29;ReadPosRankSum=-0.005;VQSLOD=2.8892;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:36,1:37:7.75:264,8,0	0/0:13,0:13:39.12:0,39,966	0/0:20,0:14:29.91:0,30,380	0/0:14,0:12:29.18:0,29,331	0/0:28,0:28:78.21:0,78,1812	0/0:13,0:13:36.11:0,36,938	1/1:15,0:15:40.27:223,40,0	1/1:15,8:23:22.96:872,23,0	0/0:19,0:19:57.20:0,57,1483	0/0:22,0:22:66.21:0,66,1592	0/0:21,0:21:63.15:0,63,1337	0/0:21,0:21:60.15:0,60,1404	0/0:14,0:14:42.11:0,42,957	0/0:12,0:12:33.07:0,33,806	0/0:11,0:11:27.08:0,27,602	0/0:19,0:19:54.15:0,54,1219	0/0:21,0:21:60.18:0,60,1523	0/0:17,0:17:48.12:0,48,774	1/1:3,16:19:50.96:682,51,0	1/1:1,14:15:33.10:556,33,0	1/1:19,0:19:21.80:123,22,0	0/0:27,0:27:70.51:0,71,1660	0/0:26,0:26:75.21:0,75,1708	0/0:21,0:21:60.14:0,60,1296	0/0:31,0:30:87.25:0,87,2049	0/1:32,0:32:70.05:364,0,70	1/1:3,22:25:51.14:953,51,0	1/1:8,0:8:11.77:71,12,0
chr10	83378889	.	AAAAC	A	5048.81	PASS	AB=0.561;AC=17;AF=0.304;AN=56;BaseQRankSum=10.836;DP=562;FS=7.128;HRun=0;HaplotypeScore=115.0803;InbreedingCoeff=0.9097;MQ=71.42;MQ0=0;MQRankSum=-3.879;QD=26.30;ReadPosRankSum=-0.588;VQSLOD=4.2636;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,14:38:82.56:1061,83,0	0/0:13,0:13:39.10:0,39,793	0/0:20,0:14:30.19:0,30,313	0/0:14,0:12:28.50:0,29,258	0/0:29,0:29:81.22:0,81,1537	0/0:12,0:12:33.11:0,33,758	1/1:5,10:15:42.13:638,42,0	1/1:23,0:23:29.21:523,29,0	0/0:19,0:19:57.18:0,57,1206	0/0:22,0:22:66.20:0,66,1323	0/0:21,0:21:60.13:0,60,1069	0/0:21,0:21:57.17:0,57,1109	0/0:14,0:14:42.08:0,42,767	0/0:12,0:12:30.09:0,30,654	0/0:10,0:10:27.06:0,27,497	0/0:19,0:19:48.14:0,48,969	0/0:21,0:21:60.18:0,60,1232	0/0:18,0:18:51.07:0,51,599	1/1:18,1:19:44.65:432,45,0	1/1:15,0:15:32.43:286,32,0	1/1:2,16:18:29.68:405,30,0	0/0:27,0:27:71.96:0,72,1390	0/0:26,0:26:71.16:0,71,1351	0/0:21,0:21:57.17:0,57,1060	0/0:31,0:30:79.24:0,79,1642	0/1:7,25:32:30.40:963,0,30	1/1:24,0:24:51.11:541,51,0	1/1:0,8:8:12.04:199,12,0
chr10	83378892	.	AC	A	2135.56	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=13.614;DP=549;FS=14.129;HRun=1;HaplotypeScore=90.7339;InbreedingCoeff=0.9123;MQ=71.92;MQ0=0;MQRankSum=-3.809;QD=10.57;ReadPosRankSum=0.148;VQSLOD=0.3418;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:74.87:394,75,0	0/0:12,1:13:7.27:0,7,341	0/0:17,2:13:25.78:0,26,231	0/0:15,0:13:15.78:0,16,155	0/0:29,0:29:74.67:0,75,782	0/0:11,0:11:29.37:0,29,336	1/1:15,0:15:40.02:211,40,0	1/1:17,6:23:39.73:383,40,0	0/0:19,0:19:57.06:0,57,654	0/0:24,0:24:67.56:0,68,742	0/0:20,0:20:54.93:0,55,604	0/0:19,0:19:51:0,51,599	0/0:14,0:14:26.23:0,26,380	0/0:10,0:10:27.09:0,27,335	0/0:11,0:11:33.04:0,33,344	0/0:19,0:19:43.48:0,43,477	0/0:21,0:21:60.60:0,61,705	0/1:18,0:18:6.36:6,0,80	1/1:18,0:18:39.64:297,40,0	1/1:14,0:14:31.98:222,32,0	1/1:18,0:18:28.52:150,29,0	0/0:26,1:27:43.42:0,43,704	0/0:24,1:25:22.58:0,23,595	0/0:20,0:20:54.41:0,54,592	0/0:31,0:30:65.26:0,65,899	1/1:30,0:30:16.93:363,17,0	1/1:23,0:23:48.35:264,48,0	1/1:8,0:8:11.50:59,12,0
chr10	83378897	.	A	AT	1232.82	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=6.569;DP=554;FS=5.921;HRun=6;HaplotypeScore=96.0084;InbreedingCoeff=0.7951;MQ=71.92;MQ0=0;MQRankSum=-5.226;QD=18.13;ReadPosRankSum=0.184;VQSLOD=3.0357;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,29:38:81.21:947,81,0	0/0:13,0:13:30.03:0,30,296	0/0:20,0:14:24.68:0,25,265	0/1:14,0:12:3.83:4,0,192	0/0:29,0:29:75.15:0,75,757	0/0:12,0:12:33.07:0,33,336	1/1:2,14:16:36.08:406,36,0	0/0:24,0:24:63:0,63,593	0/0:18,0:18:45.08:0,45,452	0/0:25,0:25:63.13:0,63,634	0/0:20,0:20:54.11:0,54,545	0/0:17,0:17:48.11:0,48,490	0/0:14,0:14:36.07:0,36,365	0/0:11,0:11:30.07:0,30,306	0/0:12,0:12:33.07:0,33,336	0/0:17,0:17:39.09:0,39,398	0/0:23,0:23:69.15:0,69,702	0/0:19,0:19:51.08:0,51,505	0/0:17,0:17:42.06:0,42,407	0/0:14,0:14:36.02:0,36,344	0/0:19,0:19:23.94:0,24,216	0/0:25,0:25:57.12:0,57,581	0/0:23,0:23:63.14:0,63,642	0/0:17,0:17:45.10:0,45,457	0/0:32,0:31:81.16:0,81,816	0/0:33,0:33:81.01:0,81,773	0/0:24,0:24:47.89:0,48,450	0/0:8,0:8:6.01:0,6,59
chr10	83379293	.	AGAAG	A	5581.23	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.525;DP=610;FS=1.785;HRun=0;HaplotypeScore=103.5704;InbreedingCoeff=0.9936;MQ=81.84;MQ0=2;MQRankSum=-7.079;QD=42.60;ReadPosRankSum=1.366;VQSLOD=5.3933;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.32:0,93,2393	0/0:19,0:19:51.16:0,51,1306	0/0:24,0:24:58.98:0,59,1404	0/0:33,0:32:81.20:0,81,1696	0/0:19,0:19:57.18:0,57,1464	0/0:22,0:22:66.23:0,66,1638	0/0:26,0:26:75.25:0,75,1929	1/1:3,35:38:99:1858,102,0	0/0:32,0:32:96.31:0,96,2472	0/0:16,0:16:48.16:0,48,1272	0/0:22,0:22:66.21:0,66,1673	0/0:21,0:21:63.20:0,63,1553	0/0:23,0:23:69.20:0,69,1697	0/0:22,0:22:57.19:0,57,1463	0/0:27,0:27:81.27:0,81,2107	0/0:20,0:20:60.20:0,60,1534	0/0:14,0:14:39.09:0,39,980	1/1:1,7:8:12.04:224,12,0	1/1:3,17:20:51.13:823,51,0	1/1:3,18:20:42.23:831,42,0	1/1:0,16:16:42.14:784,42,0	0/0:22,0:22:60.18:0,60,1499	0/0:19,0:19:57.20:0,57,1453	0/0:22,0:22:63.22:0,63,1569	0/0:15,0:15:45.15:0,45,1190	0/0:18,0:18:54.18:0,54,1387	1/1:0,28:27:57.20:1061,57,0	0/0:10,0:10:30.09:0,30,710
chr10	83381056	.	AT	A	180.78	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=3.767;DP=288;FS=8.862;HRun=9;HaplotypeScore=31.0002;InbreedingCoeff=0.6540;MQ=74.49;MQ0=0;MQRankSum=0.425;QD=16.43;ReadPosRankSum=1.265;VQSLOD=2.4553;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.18:0,66,750	./.	0/0:4,0:4:6.02:0,6,66	0/0:10,0:10:14.81:0,15,177	0/0:11,0:11:21.05:0,21,234	0/0:8,0:8:15.04:0,15,173	0/0:18,0:18:51.11:0,51,574	0/0:22,0:22:60.15:0,60,667	0/0:7,0:7:21.05:0,21,233	0/0:5,0:5:15.04:0,15,173	0/0:9,0:9:24.06:0,24,268	0/0:8,0:8:24.07:0,24,277	0/0:7,0:7:18.05:0,18,208	0/0:11,0:11:33.10:0,33,381	0/0:13,0:13:33.10:0,33,381	0/0:11,0:11:33.10:0,33,381	0/0:24,0:25:72.05:0,72,810	1/1:0,11:11:30.02:275,30,0	0/0:8,0:8:21.06:0,21,243	0/0:2,0:2:3.01:0,3,35	0/0:12,0:12:33.10:0,33,381	0/0:6,0:6:15.04:0,15,173	0/0:3,0:3:6.02:0,6,69	0/0:9,0:9:27.08:0,27,310	0/0:5,0:5:15.04:0,15,165	0/0:11,0:11:27.08:0,27,312	0/0:22,0:22:63.19:0,63,727	0/0:6,0:6:15.04:0,15,173
chr10	83381363	.	G	GTATATA	2472.42	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=4.101;DP=462;FS=2.648;HRun=0;HaplotypeScore=114.6726;InbreedingCoeff=0.8601;MQ=60.43;MQ0=1;MQRankSum=-3.255;QD=21.31;ReadPosRankSum=-2.056;VQSLOD=2.9967;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:16.16:379,16,0	0/0:6,0:6:18.02:0,18,266	0/0:11,0:6:2.94:0,3,18	0/0:16,0:7:2.50:0,2,9	1/1:15,2:17:6.02:133,6,0	0/0:23,0:23:66.13:0,66,1188	1/1:7,1:8:9.01:171,9,0	0/0:40,0:40:99:0,108,1471	0/0:14,0:14:33.07:0,33,608	0/0:19,0:19:54.13:0,54,930	0/0:16,0:16:39.04:0,39,684	0/0:13,0:13:30.05:0,30,523	1/1:8,0:8:17.97:285,18,0	1/1:9,0:9:12:248,12,0	0/0:16,0:16:36.09:0,36,717	0/0:20,0:20:60.11:0,60,1079	0/0:18,0:18:54.06:0,54,973	0/0:16,0:16:38.45:0,38,701	0/0:14,0:14:39.03:0,39,599	0/0:15,0:15:36.08:0,36,674	0/0:16,0:16:36.07:0,36,673	1/1:6,0:6:5.99:50,6,0	0/0:19,0:19:39.06:0,39,698	0/0:24,0:24:51.05:0,51,854	1/1:15,1:16:8.95:73,9,0	1/1:18,2:20:4.16:918,4,0	0/0:30,0:30:72.18:0,72,1389	1/1:7,0:7:18:409,18,0
chr10	83381375	.	A	ATATG	1600.89	PASS	AB=0.806;AC=15;AF=0.268;AN=56;BaseQRankSum=11.174;DP=517;FS=7.030;HRun=0;HaplotypeScore=111.4495;InbreedingCoeff=0.7073;MQ=54.49;MQ0=7;MQRankSum=0.076;QD=11.20;ReadPosRankSum=-2.368;VQSLOD=2.0605;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,5:33:13.72:257,14,0	0/0:7,0:7:18.06:0,18,320	0/0:18,0:7:8.39:0,8,105	0/0:28,0:7:5.89:0,6,64	1/1:7,16:23:11.41:101,11,0	0/0:23,0:23:50.35:0,50,1112	1/1:8,0:8:11.45:110,11,0	0/0:38,0:38:98.64:0,99,1577	0/0:16,0:16:42.13:0,42,752	0/0:17,0:17:51.17:0,51,964	0/0:16,0:16:45.15:0,45,804	0/0:15,0:15:39.12:0,39,678	1/1:11,1:12:17.51:235,18,0	0/1:3,5:8:4.74:139,0,5	0/0:15,0:15:42.14:0,42,776	0/0:22,0:22:66.21:0,66,1209	0/0:20,0:20:51.17:0,51,906	0/0:17,0:17:39.13:0,39,736	0/0:18,0:18:51.16:0,51,906	0/0:16,0:16:42.13:0,42,781	0/0:19,0:19:36.12:0,36,683	0/1:7,1:8:4.98:15,0,5	0/0:14,0:13:30.10:0,30,568	0/0:28,0:28:59.22:0,59,1132	1/1:6,10:16:5.08:32,5,0	0/1:19,2:21:23.71:554,0,24	0/0:26,0:26:78.25:0,78,1423	1/1:10,4:14:26.54:342,27,0
chr10	83381379	.	ATG	A	1553.56	PASS	AB=0.793;AC=18;AF=0.321;AN=56;BaseQRankSum=9.310;DP=551;FS=23.553;HRun=0;HaplotypeScore=97.0151;InbreedingCoeff=0.6649;MQ=53.47;MQ0=9;MQRankSum=0.966;QD=9.03;ReadPosRankSum=-3.003;VQSLOD=0.7630;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,22:38:8.42:320,8,0	0/0:6,0:6:15.05:0,15,243	0/0:28,0:12:15.85:0,16,160	0/0:37,0:4:9:0,9,99	1/1:19,3:22:9.03:110,9,0	0/0:24,0:24:11.48:0,11,631	1/1:2,5:7:5.80:73,6,0	0/0:33,0:33:69.21:0,69,1056	0/0:16,0:16:30.10:0,30,482	0/0:18,1:19:2.48:0,2,527	0/0:14,1:15:2.46:0,2,530	0/0:16,2:18:5.43:0,5,541	1/1:4,7:12:16.95:165,17,0	1/1:7,2:9:11.52:98,12,0	0/0:15,0:15:39.12:0,39,602	0/0:23,0:23:66.20:0,66,1016	0/1:18,2:20:34.23:34,0,431	0/0:17,0:17:37.95:0,38,554	0/0:18,0:18:27.09:0,27,426	0/0:17,0:17:42.12:0,42,643	0/0:23,0:23:36:0,36,509	1/1:1,9:10:9.03:110,9,0	0/0:12,0:11:24.06:0,24,357	0/0:30,1:31:26.40:0,26,860	1/1:12,4:16:13.83:142,14,0	0/1:11,10:21:15.96:291,0,16	0/0:26,1:27:2.74:0,3,802	1/1:11,6:17:31.40:401,31,0
chr10	83381451	.	CGTGTGTGTGTGTGTGTGT	C	1138.41	PASS	AB=0.735;AC=9;AF=0.167;AN=54;BaseQRankSum=5.264;DP=659;FS=17.104;HRun=0;HaplotypeScore=239.4592;InbreedingCoeff=0.6291;MQ=46.06;MQ0=45;MQRankSum=-1.340;QD=9.04;ReadPosRankSum=-2.857;VQSLOD=0.9046;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:20.55:0,21,438	0/0:6,0:6:9.03:0,9,509	./.	0/0:64,0:5:7.66:0,8,33	0/0:19,0:19:17.09:0,17,472	0/0:19,0:19:22.67:0,23,1131	0/0:16,0:14:2.02:0,2,94	0/1:16,9:23:11.97:358,0,12	0/0:18,0:16:21.07:0,21,1104	0/0:14,0:14:21.07:0,21,907	0/0:9,0:9:9.03:0,9,485	0/0:13,0:12:9.03:0,9,529	0/0:16,0:15:12.98:0,13,243	0/0:10,0:8:6.49:0,6,128	0/0:14,0:14:18.06:0,18,1004	0/0:16,0:16:21.06:0,21,1094	0/0:17,0:22:27.04:0,27,1151	0/0:30,0:29:61.45:0,61,3064	1/1:16,5:19:11.95:367,12,0	1/1:13,1:17:2.95:19,3,0	1/1:34,0:40:6.04:125,6,0	0/0:16,0:15:9.03:0,9,231	0/0:14,0:13:18.06:0,18,868	0/0:56,0:55:91.23:0,91,5036	0/0:10,0:11:12.04:0,12,294	0/0:21,0:19:30.10:0,30,706	1/1:16,6:23:11.20:410,11,0	0/0:20,0:25:33.10:0,33,606
chr10	83381888	.	CGTTT	C	3078.90	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.061;DP=550;FS=7.956;HRun=0;HaplotypeScore=93.4683;InbreedingCoeff=0.9842;MQ=62.44;MQ0=3;MQRankSum=-2.390;QD=25.66;ReadPosRankSum=2.395;VQSLOD=2.6118;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,18:27:34.38:651,34,0	0/0:6,0:6:12.04:0,12,298	0/0:17,0:14:27.01:0,27,506	0/0:16,0:13:20.84:0,21,331	1/1:3,15:18:36.12:601,36,0	0/0:26,0:26:60.21:0,60,1405	1/1:9,10:19:33.11:557,33,0	0/0:34,0:34:75.25:0,75,1718	0/0:26,0:26:63.21:0,63,1466	0/0:17,0:17:39.13:0,39,968	0/0:7,0:7:21.05:0,21,394	0/0:14,0:14:33.11:0,33,789	1/1:4,7:11:12.04:202,12,0	1/1:6,15:20:33.11:556,33,0	0/0:30,0:30:72.25:0,72,1787	0/0:20,0:20:45.15:0,45,1088	0/0:19,0:19:39.09:0,39,845	0/0:40,0:40:99:0,104,2375	0/0:14,0:14:33.11:0,33,696	0/0:24,0:24:63.19:0,63,1514	0/0:18,0:18:48.16:0,48,1194	1/1:3,8:11:18.06:304,18,0	0/0:12,0:12:30.09:0,30,667	0/0:19,0:19:57.14:0,57,1312	1/1:2,11:13:24.08:405,24,0	0/0:33,0:33:90.31:0,90,2168	0/0:28,0:28:60.17:0,60,1309	0/0:10,0:10:21.07:0,21,519
chr10	83382076	.	A	AG	691.94	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.047;DP=240;FS=8.528;HRun=0;HaplotypeScore=33.2049;InbreedingCoeff=0.8822;MQ=106.09;MQ0=0;MQRankSum=-8.971;QD=19.77;ReadPosRankSum=-1.426;VQSLOD=4.5686;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:45.15:0,45,629	0/0:1,0:1:3.01:0,3,42	0/0:21,0:21:57.16:0,57,776	0/0:12,0:12:30.06:0,30,370	0/0:11,0:11:33.11:0,33,461	0/0:10,0:10:30.10:0,30,420	0/0:15,0:15:45.12:0,45,608	1/1:0,8:8:24.04:234,24,0	0/0:9,0:9:27.09:0,27,378	0/0:9,0:9:27.09:0,27,378	0/0:9,0:9:27.09:0,27,376	0/0:4,0:4:12.04:0,12,168	0/0:3,0:3:9.03:0,9,126	0/0:7,0:7:21.07:0,21,294	0/0:8,0:8:24.08:0,24,336	0/0:6,0:6:18.05:0,18,235	0/0:13,0:13:39.13:0,39,545	0/0:10,0:10:30.10:0,30,420	1/1:0,9:9:27.04:267,27,0	1/1:0,4:4:11.98:98,12,0	1/1:3,5:8:16.21:123,16,0	0/0:7,0:7:18.06:0,18,252	0/0:9,0:9:27.09:0,27,378	0/0:11,0:11:33.11:0,33,462	0/0:5,0:5:15.05:0,15,210	0/0:9,0:9:27.09:0,27,377	1/1:0,6:6:17.92:139,18,0	0/0:1,0:1:3.01:0,3,37
chr10	83382077	.	ATTGTG	A	1428.24	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.942;DP=240;FS=8.523;HRun=0;HaplotypeScore=50.3441;InbreedingCoeff=0.8835;MQ=106.09;MQ0=0;MQRankSum=-9.104;QD=40.81;ReadPosRankSum=-1.140;VQSLOD=2.1626;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:45.15:0,45,1499	0/0:1,0:1:3.01:0,3,100	0/0:21,0:21:63.22:0,63,1913	0/0:12,0:12:36.12:0,36,1065	0/0:11,0:11:33.11:0,33,1099	0/0:10,0:10:30.10:0,30,976	0/0:15,0:15:45.15:0,45,1498	1/1:0,8:8:24.08:410,24,0	0/0:9,0:9:27.09:0,27,900	0/0:9,0:9:27.09:0,27,873	0/0:9,0:9:27.07:0,27,702	0/0:4,0:4:12.04:0,12,400	0/0:3,0:3:9.03:0,9,299	0/0:7,0:7:21.07:0,21,699	0/0:8,0:8:24.08:0,24,800	0/0:6,0:6:18.06:0,18,600	0/0:13,0:13:39.13:0,39,1203	0/0:10,0:10:30.10:0,30,893	1/1:0,9:9:27.09:465,27,0	1/1:0,4:4:12.04:184,12,0	1/1:0,5:8:18.06:267,18,0	0/0:7,0:7:18.06:0,18,600	0/0:9,0:9:27.09:0,27,875	0/0:11,0:11:33.11:0,33,1099	0/0:5,0:5:15.05:0,15,438	0/0:9,0:9:27.09:0,27,900	1/1:0,6:6:18.06:271,18,0	0/0:1,0:1:2.98:0,3,21
chr10	83382753	.	C	CCG	4445.56	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=-7.724;DP=502;FS=9.861;HRun=0;HaplotypeScore=95.2741;InbreedingCoeff=0.8582;MQ=60.78;MQ0=25;MQRankSum=4.118;QD=26.31;ReadPosRankSum=1.295;VQSLOD=5.9427;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,29:38:25.69:951,26,0	0/0:8,0:6:15.05:0,15,187	./.	0/0:7,0:8:0:0,0,1	1/1:4,13:18:27.09:437,27,0	0/0:19,0:19:36.10:0,36,437	1/1:7,27:33:63.13:1037,63,0	0/0:17,0:17:11.61:0,12,66	0/0:16,0:13:18.06:0,18,224	0/0:21,0:20:39.11:0,39,475	0/0:17,0:17:27.07:0,27,325	0/0:12,0:11:9.03:0,9,113	1/1:3,10:13:27.09:443,27,0	1/1:3,14:18:36.12:591,36,0	0/0:15,0:14:24.08:0,24,300	0/0:10,0:9:18.04:0,18,212	0/0:27,0:25:60.17:0,60,734	0/0:29,0:25:60.08:0,60,700	0/0:4,0:4:5.83:0,6,33	0/0:17,0:17:2.92:0,3,17	0/0:16,0:16:0.46:0,0,1	1/1:9,11:17:23.83:395,24,0	0/0:13,0:14:14.82:0,15,134	0/0:20,0:19:33.09:0,33,398	1/1:12,13:25:36.12:591,36,0	0/0:33,0:32:66.20:0,66,813	0/0:10,0:10:8.62:0,9,47	0/0:16,0:15:36.08:0,36,433
chr10	83382765	.	GCA	G	363.51	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=5.831;DP=405;FS=14.096;HRun=0;HaplotypeScore=81.4219;InbreedingCoeff=0.7334;MQ=52.75;MQ0=55;MQRankSum=-6.106;QD=9.82;ReadPosRankSum=-1.557;VQSLOD=1.7977;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:28:63.17:0,63,728	0/0:9,0:6:15.05:0,15,273	./.	0/0:5,0:4:2.88:0,3,22	0/0:14,0:13:27.07:0,27,301	0/0:15,0:15:36.11:0,36,626	0/0:30,0:27:63.18:0,63,714	1/1:0,4:4:12.04:172,12,0	0/0:14,0:11:18.95:0,19,317	0/0:20,0:15:45.13:0,45,762	0/0:11,0:11:27.09:0,27,488	0/0:8,0:7:9.03:0,9,165	0/0:15,0:11:27.08:0,27,306	0/0:17,0:16:36.10:0,36,409	0/0:14,0:13:24.08:0,24,437	0/0:8,0:6:18.06:0,18,323	0/0:24,0:22:57.19:0,57,1015	0/0:30,0:25:54.18:0,54,973	1/1:0,2:2:6.02:86,6,0	1/1:0,9:9:5.57:62,6,0	1/1:1,2:3:3.01:37,3,0	0/0:16,0:12:24.05:0,24,273	0/1:12,0:11:8.17:8,0,145	0/0:21,0:19:33.08:0,33,547	0/0:16,0:15:36.01:0,36,403	0/0:27,0:24:69.19:0,69,1177	1/1:0,7:7:12:149,12,0	0/0:15,0:13:39.09:0,39,645
chr10	83383045	.	A	AAACATTACG	2327.68	PASS	AC=4;AF=0.111;AN=36;BaseQRankSum=2.034;DP=304;FS=0.994;HRun=0;HaplotypeScore=49.5550;InbreedingCoeff=0.4438;MQ=25.73;MQ0=155;MQRankSum=-3.266;QD=101.20;ReadPosRankSum=1.227;VQSLOD=3.9080;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:1:3.01:0,3,92	0/0:9,0:8:24.08:0,24,680	./.	./.	0/0:12,0:9:6.02:0,6,143	./.	./.	./.	0/0:12,0:1:3.01:0,3,92	0/0:23,0:11:30.06:0,30,847	0/0:13,0:11:5.93:0,6,53	./.	0/0:4,0:1:3.01:0,3,92	0/0:12,0:2:3.01:0,3,92	0/0:9,0:1:3.01:0,3,92	./.	./.	0/0:11,0:1:2.99:0,3,23	./.	1/1:6,11:16:42.14:1854,42,0	./.	0/0:18,0:12:15.05:0,15,391	0/0:19,0:14:6.02:0,6,165	0/0:11,0:1:3.01:0,3,56	0/0:25,0:25:48.05:0,48,1295	0/0:18,0:9:21.03:0,21,571	1/1:2,4:5:12.04:580,12,0	0/0:15,0:8:9.03:0,9,276
chr10	83384719	.	C	CTATG	1749.04	PASS	AB=0.887;AC=14;AF=0.269;AN=52;BaseQRankSum=8.733;DP=510;FS=11.231;HRun=0;HaplotypeScore=125.1802;InbreedingCoeff=0.2342;MQ=48.67;MQ0=26;MQRankSum=-0.477;QD=8.14;ReadPosRankSum=0.461;VQSLOD=2.3132;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:22:85.02:85,0,132	0/0:7,0:7:21.02:0,21,251	./.	./.	1/1:12,0:12:0.30:105,0,0	0/1:20,0:19:73.31:73,0,142	0/0:17,0:17:11.97:0,12,128	0/0:12,0:4:8.96:0,9,69	0/0:27,0:27:4.07:0,4,348	0/0:31,0:31:87.22:0,87,1290	0/0:25,0:24:68.99:0,69,736	0/1:18,0:13:99:122,0,106	1/1:18,0:17:7.53:156,8,0	1/1:10,0:7:5.99:50,6,0	0/0:20,0:19:57.09:0,57,809	0/0:14,0:14:39.05:0,39,539	0/0:30,0:29:75.11:0,75,1111	0/0:23,0:21:57.51:0,58,763	0/0:6,0:6:15.03:0,15,182	0/0:28,0:23:20.99:0,21,199	0/0:8,0:6:8.99:0,9,76	0/1:10,0:10:0:0,0,0	0/0:17,0:17:23.96:0,24,197	0/1:25,0:22:11.60:12,0,204	0/1:17,0:13:0.52:106,0,1	0/1:8,31:35:33:1015,0,33	0/0:17,0:16:29.21:0,29,238	0/1:3,19:21:4.56:172,0,5
chr10	83384735	.	CTATGTATGTATG	C	411.79	PASS	AB=0.970;AC=13;AF=0.260;AN=50;BaseQRankSum=8.061;DP=515;FS=0.702;HRun=0;HaplotypeScore=179.1824;InbreedingCoeff=-0.1270;MQ=47.63;MQ0=28;MQRankSum=-1.662;QD=1.90;ReadPosRankSum=-2.229;VQSLOD=2.5637;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:24:18.96:19,0,148	0/0:9,0:9:21.07:0,21,491	./.	./.	0/0:11,0:11:5.42:0,5,42	0/1:22,0:21:99:161,0,583	0/0:15,0:15:2.95:0,3,23	./.	0/1:24,0:24:17.78:18,0,1183	0/0:33,0:33:96.32:0,96,2887	0/0:24,0:22:57.20:0,57,1492	0/1:21,0:16:99:171,0,559	0/1:16,0:15:13:13,0,19	0/0:11,0:8:2.99:0,3,24	0/0:25,0:24:69.22:0,69,1960	0/0:16,0:16:45.15:0,45,1319	0/0:33,0:31:48.34:0,48,2162	0/0:22,0:20:57.19:0,57,1470	0/1:7,0:7:29.13:29,0,32	0/1:23,0:22:18.98:19,0,19	1/1:6,0:4:0.47:1,0,0	0/0:12,0:12:2.99:0,3,24	0/0:10,7:17:24.08:0,24,633	0/0:23,0:20:33.09:0,33,807	1/1:18,0:14:3.88:26,4,0	0/1:39,0:35:48.35:48,0,802	0/1:10,0:8:15.05:42,0,15	0/0:20,0:19:2.78:0,3,13
chr10	83384743	.	GTATGTATC	G	150.84	PASS	AB=1.000;AC=13;AF=0.271;AN=48;BaseQRankSum=2.145;DP=522;FS=10.579;HRun=0;HaplotypeScore=148.7324;InbreedingCoeff=0.3098;MQ=46.91;MQ0=27;MQRankSum=-0.381;QD=1.17;ReadPosRankSum=-3.017;VQSLOD=1.2675;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:23.92:0,24,272	0/0:7,0:7:21.01:0,21,364	./.	./.	0/1:10,0:10:18.10:61,0,18	0/0:25,0:24:54.12:0,54,1120	1/1:15,0:15:3:26,3,0	0/0:13,0:8:17.56:0,18,101	0/0:25,0:25:60.16:0,60,1436	0/0:33,0:33:90.30:0,90,2272	0/0:23,0:21:57.15:0,57,1288	0/0:23,0:18:48.11:0,48,889	0/1:13,0:12:18.04:58,0,18	1/1:7,0:4:2.99:24,3,0	0/0:24,0:23:69.19:0,69,1578	0/0:18,0:18:48.14:0,48,1156	0/0:33,0:31:78.27:0,78,1904	0/0:25,0:23:63.16:0,63,1288	0/1:5,0:5:12.44:12,0,20	1/1:28,0:22:3:25,3,0	./.	./.	0/0:20,0:20:33.08:0,33,746	0/0:24,0:21:39.11:0,39,837	0/1:19,0:15:16.37:66,0,16	0/0:39,0:35:96.49:0,96,1039	1/1:12,0:7:3.98:11,4,0	0/1:20,0:19:7.62:8,0,73
chr10	83384779	.	GTATC	G	608.66	PASS	AB=0.872;AC=6;AF=0.130;AN=46;BaseQRankSum=6.419;DP=570;FS=12.171;HRun=0;HaplotypeScore=97.1466;InbreedingCoeff=0.1186;MQ=47.27;MQ0=14;MQRankSum=-7.840;QD=4.41;ReadPosRankSum=-2.344;VQSLOD=0.8170;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:2.94:18,3,0	0/0:7,0:7:21.07:0,21,533	./.	./.	0/0:15,0:15:30.10:0,30,630	0/0:18,0:17:39.13:0,39,909	./.	0/1:42,14:46:99:633,0,255	0/0:28,0:28:72.22:0,72,1512	0/0:35,0:34:93.31:0,93,2133	0/0:24,0:23:60.19:0,60,1224	0/0:20,0:15:39.12:0,39,876	0/0:15,0:14:27.09:0,27,656	0/0:10,0:7:12.04:0,12,243	0/0:19,0:18:54.16:0,54,1215	0/0:15,0:15:39.12:0,39,928	0/0:33,0:31:72.25:0,72,1663	0/0:29,0:28:75.11:0,75,1502	0/1:14,1:10:38.76:39,0,70	./.	./.	0/0:8,0:8:3.01:0,3,76	0/0:19,0:19:42.14:0,42,904	0/0:26,0:23:39.13:0,39,951	0/0:20,0:16:24.08:0,24,523	0/0:36,0:33:96.31:0,96,2048	0/1:14,7:12:8.97:9,0,13	0/1:16,0:15:22.32:22,0,203
chr10	83384795	.	GTATC	G	178.14	PASS	AB=0.830;AC=4;AF=0.087;AN=46;BaseQRankSum=5.899;DP=555;FS=3.357;HRun=0;HaplotypeScore=100.7409;InbreedingCoeff=0.3704;MQ=48.92;MQ0=14;MQRankSum=-4.836;QD=1.56;ReadPosRankSum=-2.526;VQSLOD=0.8105;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:8.88:60,9,0	0/0:9,0:9:27.09:0,27,620	./.	./.	0/0:21,0:21:48.16:0,48,1120	0/0:15,0:14:36.12:0,36,884	./.	0/1:55,3:46:99:186,0,450	0/0:25,0:25:63.20:0,63,1504	0/0:33,0:32:90.25:0,90,1963	0/0:20,0:19:45.15:0,45,1106	0/0:18,0:16:39.07:0,39,866	0/0:19,0:18:39.13:0,39,920	0/0:11,0:8:15.05:0,15,360	0/0:18,0:17:48.16:0,48,1171	0/0:15,0:15:45.11:0,45,997	0/0:37,0:35:90.28:0,90,2006	0/0:29,0:28:72.20:0,72,1679	0/0:8,0:8:8.86:0,9,153	./.	./.	0/0:10,0:10:9.03:0,9,176	0/0:18,0:18:51.13:0,51,1007	0/0:26,0:24:51.17:0,51,1117	0/0:20,0:18:36.11:0,36,798	0/0:33,0:33:84.21:0,84,1875	0/1:13,9:13:37.48:37,0,84	0/0:15,0:14:27.56:0,28,538
chr10	83384811	.	CTATG	C	35.36	PASS	AC=2;AF=0.040;AN=50;BaseQRankSum=4.770;DP=582;FS=15.574;HRun=0;HaplotypeScore=98.5054;InbreedingCoeff=0.6848;MQ=49.08;MQ0=15;MQRankSum=-0.989;QD=0.86;ReadPosRankSum=-1.418;VQSLOD=0.8118;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,35:40:11.90:120,12,0	0/0:14,0:14:39.07:0,39,778	0/0:10,0:2:3.01:0,3,42	./.	0/0:25,0:25:60.21:0,60,1529	0/0:20,0:18:44.90:0,45,959	./.	0/0:44,0:33:20.26:0,20,528	0/0:25,0:25:69.15:0,69,1500	0/0:33,0:32:89.93:0,90,2011	0/0:18,0:17:51.07:0,51,1001	0/0:18,0:16:45.09:0,45,932	0/0:20,0:20:48.16:0,48,1201	0/0:13,0:13:30.10:0,30,710	0/0:18,0:17:51.05:0,51,968	0/0:15,0:15:45.11:0,45,960	0/0:37,0:35:96.28:0,96,2198	0/0:31,0:30:87.16:0,87,1883	0/0:6,0:6:11.84:0,12,129	0/0:31,0:25:0:0,0,0	./.	0/0:7,0:7:9.03:0,9,243	0/0:18,0:18:51.16:0,51,1259	0/0:27,0:25:54.12:0,54,1198	0/0:21,0:21:48.16:0,48,1246	0/0:30,0:30:87.17:0,87,1865	0/0:24,0:15:8.06:0,8,118	0/0:17,0:17:36.12:0,36,904
chr10	83384815	.	G	GTATC	202.03	PASS	AB=1.000;AC=3;AF=0.060;AN=50;BaseQRankSum=4.277;DP=576;FS=20.401;HRun=0;HaplotypeScore=98.9075;InbreedingCoeff=0.6452;MQ=49.64;MQ0=17;MQRankSum=-1.381;QD=2.89;ReadPosRankSum=-2.250;VQSLOD=-0.5049;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:37:12.04:287,12,0	0/0:13,0:13:30.09:0,30,470	0/0:16,0:3:5.99:0,6,63	./.	0/0:25,0:25:60.20:0,60,976	0/0:19,0:17:37.40:0,37,569	./.	0/0:38,0:30:14.33:0,14,311	0/0:24,0:24:54.13:0,54,814	0/0:32,0:31:75.22:0,75,1167	0/0:19,0:19:36.10:0,36,567	0/0:16,0:16:36.09:0,36,534	0/0:20,0:20:48.16:0,48,779	0/0:13,0:13:30.10:0,30,487	0/0:17,0:17:36.07:0,36,533	0/0:16,0:16:33.10:0,33,512	0/0:38,0:37:83.65:0,84,1251	0/0:32,0:31:72.14:0,72,1085	0/0:6,0:6:3.01:0,3,45	0/1:32,0:26:0.12:0,0,0	./.	0/0:8,0:8:12.02:0,12,174	0/0:17,0:17:51.14:0,51,782	0/0:27,0:25:48.09:0,48,682	0/0:22,0:22:51.16:0,51,816	0/0:29,0:29:69.21:0,69,1067	0/0:24,0:15:5.76:0,6,74	0/0:15,0:15:36.12:0,36,592
chr10	83384859	.	GTGTC	G	68.09	PASS	AB=0.847;AC=4;AF=0.074;AN=54;BaseQRankSum=2.883;DP=521;FS=10.576;HRun=0;HaplotypeScore=98.2552;InbreedingCoeff=0.2484;MQ=54.93;MQ0=6;MQRankSum=-3.724;QD=1.58;ReadPosRankSum=-1.590;VQSLOD=0.8251;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:22.14:0,22,951	0/0:13,0:13:39.13:0,39,1011	0/0:18,0:8:20.94:0,21,474	0/0:7,0:2:3.01:0,3,72	0/0:27,0:27:78.25:0,78,1983	0/0:18,0:17:47.93:0,48,1311	0/0:11,0:11:15.05:0,15,410	0/1:12,1:11:90.72:91,0,138	0/0:24,0:24:66.23:0,66,1729	0/0:27,0:27:81.27:0,81,2086	0/0:28,0:27:81.26:0,81,2094	0/0:13,0:13:36.12:0,36,942	0/0:14,0:14:33.11:0,33,865	0/0:10,0:10:27.09:0,27,737	0/0:12,0:12:36.12:0,36,995	0/0:17,0:17:45.12:0,45,1162	0/0:29,0:28:71.90:0,72,1847	0/0:34,0:34:96.33:0,96,2596	1/1:2,1:4:1.18:56,1,0	0/1:18,8:24:21.09:21,0,67	./.	0/0:11,0:11:30.10:0,30,817	0/0:24,0:24:72.25:0,72,1914	0/0:23,0:21:45.10:0,45,1174	0/0:27,0:27:81.28:0,81,2231	0/0:27,0:27:78.27:0,78,2025	0/0:9,0:7:2.29:0,2,6	0/0:14,0:14:42.14:0,42,1136
chr10	83384900	.	C	CTATCTATG	1274.88	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=5.549;DP=506;FS=6.114;HRun=0;HaplotypeScore=137.8123;InbreedingCoeff=0.8386;MQ=55.83;MQ0=0;MQRankSum=-4.770;QD=17.96;ReadPosRankSum=-3.469;VQSLOD=1.9000;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:48.16:0,48,1183	0/0:9,0:9:18.06:0,18,475	0/0:6,0:6:8.61:0,9,84	0/0:3,0:3:1.22:0,1,21	0/0:24,0:24:69.21:0,69,1622	0/0:21,0:21:41.27:0,41,1083	0/0:8,0:8:12.01:0,12,258	1/1:22,0:21:26.98:437,27,0	0/0:13,0:13:33.11:0,33,869	0/0:31,0:31:75.26:0,75,1912	0/0:28,0:28:72.21:0,72,1589	0/0:18,0:18:48.15:0,48,1078	0/0:15,0:15:26.96:0,27,626	./.	0/0:19,0:19:45.15:0,45,1080	0/0:18,0:18:48.12:0,48,1164	0/0:22,0:21:51.13:0,51,1167	0/0:31,0:31:56.23:0,56,1539	1/1:4,1:6:9.03:370,9,0	1/1:23,13:37:18.04:485,18,0	0/0:6,0:6:15.05:0,15,363	0/0:12,0:12:27.08:0,27,658	0/0:16,0:16:45.15:0,45,1161	0/0:22,0:22:39.13:0,39,966	0/0:26,0:26:66.23:0,66,1671	0/0:37,0:37:84.29:0,84,2186	1/1:5,1:5:3.01:127,3,0	0/0:10,0:10:27.09:0,27,631
chr10	83385992	.	C	CGG	3676.65	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=0.818;DP=507;FS=7.191;HRun=7;HaplotypeScore=92.1846;InbreedingCoeff=0.9710;MQ=74.79;MQ0=1;MQRankSum=-5.174;QD=21.88;ReadPosRankSum=-4.374;VQSLOD=1.3940;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,108,1238	0/0:4,0:4:9.02:0,9,105	0/0:10,0:10:16.27:0,16,181	0/0:15,0:15:21.79:0,22,259	1/1:3,9:12:24.08:390,24,0	0/0:12,0:12:30.04:0,30,334	0/0:29,0:29:75.21:0,75,874	1/1:13,0:14:25.42:181,25,0	0/0:21,0:21:51.14:0,51,594	0/0:21,0:21:42.10:0,42,489	0/0:11,0:11:27.02:0,27,299	0/0:25,0:25:66.18:0,66,769	1/1:5,15:20:38.62:684,39,0	1/1:3,21:24:54.18:882,54,0	0/0:12,0:12:30.09:0,30,349	0/0:11,0:12:24.06:0,24,280	0/0:21,0:21:57.16:0,57,664	0/0:28,0:28:81.24:0,81,944	1/1:6,0:10:23.08:171,23,0	1/1:5,0:9:9.34:64,9,0	1/1:25,0:31:27.67:209,28,0	1/1:2,7:10:18.06:295,18,0	0/0:7,0:7:15.04:0,15,175	0/0:36,0:36:99:0,99,1153	1/1:4,12:15:33.11:540,33,0	0/0:27,0:27:63.17:0,63,734	1/1:12,0:20:27.03:262,27,0	0/0:5,0:5:12.03:0,12,139
chr10	83385997	.	G	GGGGGGT	3418.56	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.773;DP=493;FS=0.525;HRun=0;HaplotypeScore=131.6703;InbreedingCoeff=0.9152;MQ=77.50;MQ0=1;MQRankSum=-7.226;QD=39.75;ReadPosRankSum=-6.150;VQSLOD=2.1064;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,2447	0/0:4,0:4:12.03:0,12,225	0/0:14,0:14:23.08:0,23,365	0/0:14,0:14:28.76:0,29,423	0/0:11,0:11:3.19:0,3,11	0/0:11,0:11:33.10:0,33,663	0/0:26,0:26:75.25:0,75,1644	1/1:15,0:16:39.08:690,39,0	0/0:20,0:20:57.10:0,57,1165	0/0:20,0:20:60.17:0,60,1117	0/0:10,0:10:27.07:0,27,560	0/0:24,0:24:69.20:0,69,1470	0/0:20,0:20:31.70:0,32,171	0/0:24,0:24:14.09:0,14,37	0/0:12,0:12:30.10:0,30,659	0/0:10,0:10:24.07:0,24,528	0/0:21,0:21:57.19:0,57,1234	0/0:29,0:29:87.26:0,87,1826	1/1:10,3:15:42.05:797,42,0	1/1:4,3:8:6.49:176,6,0	1/1:25,3:30:41.63:939,42,0	0/0:10,0:10:13.06:0,13,59	0/0:5,0:5:15.05:0,15,322	0/0:33,0:33:96.32:0,96,2104	0/0:16,0:15:18.93:0,19,84	0/0:25,0:25:69.22:0,69,1450	1/1:12,3:15:33.04:817,33,0	0/0:5,0:5:15.04:0,15,288
chr10	83386047	.	T	TAC	4022.45	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.387;DP=461;FS=23.095;HRun=0;HaplotypeScore=75.6650;InbreedingCoeff=0.9767;MQ=83.31;MQ0=0;MQRankSum=-5.360;QD=49.66;ReadPosRankSum=-1.206;VQSLOD=2.2343;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1950	0/0:4,0:4:12.04:0,12,196	0/0:8,0:8:24.08:0,24,380	0/0:23,0:23:55.63:0,56,790	0/0:13,0:13:39.12:0,39,611	0/0:17,0:17:51.11:0,51,774	0/0:21,0:21:63.16:0,63,947	1/1:0,14:15:45.14:811,45,0	0/0:22,0:22:66.21:0,66,1050	0/0:22,0:22:60.20:0,60,957	0/0:12,0:12:36.06:0,36,490	0/0:18,0:18:54.18:0,54,878	0/0:18,0:18:51.17:0,51,828	0/0:20,0:20:51.17:0,51,832	0/0:11,0:11:33.10:0,33,511	0/0:9,0:9:27.09:0,27,440	0/0:24,0:24:72.22:0,72,1147	0/0:22,0:22:66.17:0,66,999	1/1:0,11:13:39.11:673,39,0	1/1:0,8:8:21.07:404,21,0	1/1:1,34:33:81.23:1557,81,0	0/0:4,0:4:12.04:0,12,194	0/0:7,0:7:15.05:0,15,245	0/0:21,0:21:63.22:0,63,1024	0/0:17,0:17:51.15:0,51,802	0/0:21,0:21:60.20:0,60,956	1/1:0,10:10:30.10:576,30,0	0/0:5,0:5:15.05:0,15,245
chr10	83386368	.	TAGATAC	T	2878.23	PASS	AB=0.952;AC=9;AF=0.167;AN=54;BaseQRankSum=12.126;DP=442;FS=9.758;HRun=0;HaplotypeScore=99.5581;InbreedingCoeff=0.7913;MQ=65.65;MQ0=2;MQRankSum=-4.404;QD=25.03;ReadPosRankSum=-4.791;VQSLOD=1.4109;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:65.93:0,66,2153	0/0:5,0:5:15.03:0,15,445	0/0:9,0:4:9.02:0,9,158	0/1:18,0:15:28.10:28,0,140	0/0:19,0:19:51.11:0,51,1328	0/0:23,0:22:63.17:0,63,1879	0/0:8,0:8:24.07:0,24,701	1/1:8,42:46:99:1520,114,0	0/0:11,0:11:30.10:0,30,907	0/0:26,0:26:78.24:0,78,2355	0/0:13,0:13:36.11:0,36,1124	0/0:11,0:11:30.09:0,30,958	0/0:15,0:15:45.14:0,45,1301	0/0:16,0:16:39.77:0,40,1288	0/0:10,0:10:27.09:0,27,885	0/0:13,0:13:39.08:0,39,1273	0/0:30,0:30:87.28:0,87,2617	0/0:25,0:24:63.16:0,63,1851	1/1:3,13:16:36.10:657,36,0	1/1:0,14:14:24.08:521,24,0	./.	0/0:1,0:1:3.01:0,3,104	0/0:4,0:4:12.03:0,12,284	0/0:7,0:7:12.04:0,12,356	0/0:8,0:8:21.06:0,21,548	0/0:22,0:22:57.19:0,57,1892	1/1:2,13:15:15.05:313,15,0	0/0:10,0:10:27.09:0,27,931
chr10	83386548	.	A	AGAT	775.09	PASS	AB=0.823;AC=6;AF=0.111;AN=54;BaseQRankSum=1.688;DP=279;FS=17.075;HRun=0;HaplotypeScore=49.8896;InbreedingCoeff=0.0715;MQ=65.98;MQ0=11;MQRankSum=-5.006;QD=18.45;ReadPosRankSum=-2.913;VQSLOD=1.0679;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:6:13.40:0,13,200	0/0:11,0:11:30.10:0,30,500	0/0:8,0:6:15.04:0,15,222	0/0:8,0:5:11.87:0,12,104	0/0:5,0:4:12:0,12,127	0/0:22,0:20:60.15:0,60,944	./.	0/1:14,5:13:14.52:566,0,15	0/0:12,0:12:33.11:0,33,533	0/0:31,0:31:90.30:0,90,1458	0/0:20,0:20:54.18:0,54,900	0/0:7,0:7:21.07:0,21,341	0/0:1,0:1:3.01:0,3,41	0/0:3,0:3:9.03:0,9,145	0/0:11,0:11:30.10:0,30,490	0/0:14,0:14:42.14:0,42,695	0/0:21,0:20:48.12:0,48,759	0/0:31,0:31:86.08:0,86,1353	0/1:6,3:5:34.51:35,0,36	1/1:4,1:5:3.01:67,3,0	0/1:3,0:3:39:39,0,41	0/0:1,0:1:3.01:0,3,47	0/0:7,0:7:21.07:0,21,350	0/0:6,0:6:12.04:0,12,199	0/0:4,0:4:12.04:0,12,186	0/0:5,0:5:12.04:0,12,180	0/1:4,2:6:35.46:187,0,35	0/0:2,0:1:2.99:0,3,24
chr10	83386609	.	TGATATA	T	1965.58	PASS	AB=0.762;AC=6;AF=0.111;AN=54;BaseQRankSum=7.729;DP=367;FS=5.120;HRun=0;HaplotypeScore=88.9778;InbreedingCoeff=0.6011;MQ=71.10;MQ0=17;MQRankSum=-6.715;QD=30.71;ReadPosRankSum=-4.290;VQSLOD=2.0965;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:21.77:0,22,1092	0/0:5,0:5:9.01:0,9,226	0/0:11,0:3:4.26:0,4,61	0/0:32,0:17:7.83:0,8,78	0/0:15,0:14:42.14:0,42,1407	0/0:19,0:19:48.15:0,48,1524	0/0:5,0:2:6.02:0,6,202	0/1:16,19:30:99:932,0,540	0/0:8,0:8:15.05:0,15,504	0/0:18,0:18:45.15:0,45,1263	0/0:19,0:19:48.16:0,48,1421	0/0:8,0:8:24.08:0,24,796	0/0:5,0:5:15.05:0,15,504	0/0:5,0:5:15.05:0,15,504	0/0:9,0:9:18.06:0,18,596	0/0:13,0:13:30.10:0,30,888	0/0:18,0:18:33.55:0,34,1318	0/0:34,0:34:76.58:0,77,2518	./.	1/1:0,10:10:24.08:512,24,0	0/1:6,1:7:0.01:1,0,0	0/0:3,0:3:9.03:0,9,303	0/0:3,0:3:9.03:0,9,188	0/0:5,0:5:12.04:0,12,404	0/0:14,0:14:42.14:0,42,1413	0/0:14,0:14:42.14:0,42,1356	1/1:1,11:12:30.10:649,30,0	0/0:11,0:11:33.11:0,33,1045
chr10	83386702	.	AGATGTAGAT	A	2559.42	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=7.121;DP=540;FS=2.081;HRun=0;HaplotypeScore=159.9762;InbreedingCoeff=0.9890;MQ=68.64;MQ0=2;MQRankSum=-8.125;QD=31.21;ReadPosRankSum=-2.326;VQSLOD=2.9014;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:36.11:0,36,1447	0/0:14,0:14:42.11:0,42,1585	0/0:19,0:18:42.13:0,42,876	0/0:25,0:25:13.29:0,13,567	0/0:31,0:31:90.28:0,90,3707	0/0:23,0:23:63.17:0,63,2392	0/0:17,0:17:47.93:0,48,1502	1/1:14,5:19:27.03:370,27,0	0/0:8,0:8:21.05:0,21,900	0/0:29,0:29:84.16:0,84,3189	0/0:21,0:21:60.18:0,60,2398	0/0:13,0:13:39.13:0,39,1720	0/0:11,0:11:30.10:0,30,1287	0/0:12,0:12:36.11:0,36,1587	0/0:23,0:23:60.18:0,60,2415	0/0:21,0:21:63.12:0,63,2123	0/0:30,0:30:84.16:0,84,2983	0/0:21,0:21:33.32:0,33,2062	1/1:1,12:12:30.03:588,30,0	1/1:0,24:24:27.09:824,27,0	./.	0/0:6,0:6:18.06:0,18,814	0/0:16,0:16:48.13:0,48,1895	0/0:18,0:18:51.18:0,51,2295	0/0:16,0:16:48.14:0,48,1774	0/0:34,0:34:99:0,102,3905	1/1:2,24:26:32.96:935,33,0	0/0:21,0:21:60.08:0,60,1669
chr10	83386919	.	C	CA	4856.58	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=2.988;DP=664;FS=0.392;HRun=0;HaplotypeScore=72.1325;InbreedingCoeff=0.9975;MQ=83.58;MQ0=0;MQRankSum=0.572;QD=40.14;ReadPosRankSum=0.510;VQSLOD=5.3054;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,184,2543	0/0:7,0:7:18.06:0,18,252	0/0:28,0:28:82.14:0,82,1096	0/0:30,0:30:84.27:0,84,1147	0/0:17,0:17:45.15:0,45,629	0/0:16,0:16:48.16:0,48,662	0/0:29,0:29:87.23:0,87,1160	1/1:2,23:25:66.20:1026,66,0	0/0:28,0:28:84.25:0,84,1139	0/0:11,0:11:33.11:0,33,462	0/0:14,0:14:39.13:0,39,545	0/0:35,0:35:99:0,102,1405	0/0:23,0:23:69.21:0,69,919	0/0:20,0:20:60.19:0,60,822	0/0:40,0:40:99:0,120,1618	0/0:35,0:35:99:0,102,1390	0/0:28,0:28:84.27:0,84,1158	0/0:8,0:8:24.08:0,24,336	1/1:1,13:14:35.79:538,36,0	1/1:0,19:19:45.15:719,45,0	1/1:2,16:18:39.13:623,39,0	0/0:16,0:16:48.16:0,48,670	0/0:14,0:14:42.14:0,42,585	0/0:25,0:25:75.25:0,75,1049	0/0:15,0:15:45.15:0,45,629	0/0:28,0:28:84.28:0,84,1174	1/1:0,45:45:99:1950,123,0	0/0:15,0:15:45.12:0,45,608
chr10	83387320	.	TG	T	3910.20	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=15.597;DP=672;FS=6.640;HRun=5;HaplotypeScore=78.7682;InbreedingCoeff=0.9988;MQ=83.14;MQ0=0;MQRankSum=-2.209;QD=30.08;ReadPosRankSum=-1.421;VQSLOD=3.5548;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1566	0/0:9,0:9:27.08:0,27,353	0/0:18,0:18:47.78:0,48,518	0/0:19,0:19:45.11:0,45,557	0/0:19,0:19:54.15:0,54,705	0/0:24,0:24:69.23:0,69,944	0/0:22,0:22:66.22:0,66,902	1/1:1,13:14:39.10:442,39,0	0/0:34,0:34:99:0,99,1354	0/0:22,0:22:60.20:0,60,820	0/0:20,0:20:45.15:0,45,615	0/0:28,0:28:78.18:0,78,1025	0/0:23,0:23:66.20:0,66,883	0/0:20,0:20:51.17:0,51,698	0/0:24,0:24:72.24:0,72,983	0/0:21,0:21:63.21:0,63,862	0/0:41,0:41:99:0,111,1502	0/0:22,0:22:63.21:0,63,861	1/1:3,21:24:63.11:678,63,0	1/1:1,25:26:66.19:748,66,0	1/1:2,37:39:99:1191,105,0	0/0:24,0:24:69.22:0,69,927	0/0:23,0:23:57.19:0,57,779	0/0:33,0:33:73.45:0,73,1190	0/0:24,0:24:66.21:0,66,888	0/0:25,0:25:63.21:0,63,855	1/1:0,27:27:75.21:851,75,0	0/0:7,0:7:21.07:0,21,287
chr10	83388012	.	GA	G	5262.88	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.854;DP=698;FS=21.118;HRun=1;HaplotypeScore=69.7456;InbreedingCoeff=1.0000;MQ=82.24;MQ0=0;MQRankSum=-1.944;QD=39.87;ReadPosRankSum=-0.917;VQSLOD=2.7103;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,2058	0/0:20,0:20:60.20:0,60,957	0/0:21,0:21:63.07:0,63,911	0/0:18,0:18:53.97:0,54,788	0/0:19,0:19:57.18:0,57,888	0/0:18,0:18:51.13:0,51,765	0/0:21,0:21:63.18:0,63,954	1/1:0,25:25:75.23:1026,75,0	0/0:24,0:24:72.25:0,72,1150	0/0:28,0:28:84.29:0,84,1340	0/0:27,0:27:81.26:0,81,1254	0/0:25,0:25:75.26:0,75,1197	0/0:17,0:17:51.15:0,51,790	0/0:24,0:24:72.25:0,72,1148	0/0:28,0:28:84.29:0,84,1341	0/0:20,0:20:60.20:0,60,958	0/0:31,0:31:90.29:0,90,1413	0/0:20,0:20:57.19:0,57,908	1/1:0,19:19:57.16:761,57,0	1/1:0,34:34:99:1387,102,0	1/1:0,31:31:81.27:1132,81,0	0/0:24,0:24:69.24:0,69,1103	0/0:27,0:27:81.28:0,81,1295	0/0:29,0:29:87.30:0,87,1388	0/0:25,0:25:72.25:0,72,1147	0/0:32,0:31:96.32:0,96,1504	1/1:0,23:23:69.23:957,69,0	0/0:24,0:24:69.15:0,69,1002
chr10	83388258	.	TAC	T	1986.21	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.422;DP=541;FS=43.150;HRun=0;HaplotypeScore=80.2195;InbreedingCoeff=0.9557;MQ=80.50;MQ0=0;MQRankSum=-10.670;QD=38.20;ReadPosRankSum=-0.462;VQSLOD=1.5048;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,2281	0/0:13,0:13:36.12:0,36,695	0/0:25,0:25:69.09:0,69,1237	0/0:12,0:12:32.77:0,33,637	0/0:26,0:25:60.21:0,60,1157	0/0:24,0:24:69.24:0,69,1316	0/0:21,0:21:63.20:0,63,1182	1/1:0,14:14:36.12:551,36,0	0/0:14,0:14:42.14:0,42,811	0/0:30,0:29:87.28:0,87,1608	0/0:31,0:31:81.28:0,81,1564	0/0:13,0:13:36.12:0,36,696	0/0:22,0:22:63.22:0,63,1200	0/0:15,0:15:42.14:0,42,803	0/0:14,0:14:42.14:0,42,811	0/0:19,0:19:57.20:0,57,1101	0/0:21,0:20:60.21:0,60,1144	0/0:25,0:25:75.26:0,75,1400	1/1:0,7:7:17.28:274,17,0	1/1:0,18:18:48.12:732,48,0	1/1:0,1:1:3.01:46,3,0	0/0:20,0:20:57.20:0,57,1099	0/0:25,0:25:60.19:0,60,1103	0/0:16,0:16:48.16:0,48,905	0/0:24,0:23:66.23:0,66,1274	0/0:23,0:23:69.24:0,69,1310	1/1:0,12:12:36.12:550,36,0	0/0:15,0:15:36.12:0,36,695
chr10	83388308	.	A	AT	1513.79	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.088;DP=503;FS=51.589;HRun=0;HaplotypeScore=74.1765;InbreedingCoeff=0.9091;MQ=76.11;MQ0=0;MQRankSum=-7.470;QD=35.20;ReadPosRankSum=-3.768;VQSLOD=-0.7548;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1451	0/0:12,0:12:33.03:0,33,403	0/0:15,0:15:18.13:0,18,264	0/0:18,0:16:20.50:0,21,232	0/0:27,0:25:72.24:0,72,1002	0/0:21,0:21:63.19:0,63,849	0/0:10,0:10:30.09:0,30,402	1/1:2,5:7:20.99:270,21,0	0/0:9,0:9:21.07:0,21,293	0/0:29,0:26:69.20:0,69,943	0/0:23,0:23:66.21:0,66,898	0/0:12,0:12:36.12:0,36,499	0/0:27,0:27:81.25:0,81,1102	0/0:11,0:11:33.11:0,33,461	0/0:22,0:22:66.21:0,66,902	0/0:17,0:17:51.16:0,51,684	0/0:21,0:21:61.09:0,61,839	0/0:27,0:27:78.18:0,78,1029	1/1:0,2:2:3.01:46,3,0	1/1:3,16:19:56.99:753,57,0	1/1:0,2:2:3.01:44,3,0	0/0:25,0:24:63.20:0,63,850	0/0:21,0:20:57.09:0,57,745	0/0:14,0:14:39.10:0,39,524	0/0:26,0:26:78.24:0,78,1044	0/0:21,0:21:60.20:0,60,837	1/1:1,12:13:39.09:560,39,0	0/0:14,0:14:39.13:0,39,544
chr10	83388382	.	A	AAC	1232.16	PASS	AB=0.925;AC=16;AF=0.348;AN=46;BaseQRankSum=-2.148;DP=556;FS=1.577;HRun=0;HaplotypeScore=123.5052;InbreedingCoeff=0.1454;MQ=54.59;MQ0=11;MQRankSum=1.931;QD=4.83;ReadPosRankSum=0.453;VQSLOD=2.9325;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,3:44:56.31:126,0,56	./.	./.	./.	0/0:13,0:22:11.83:0,12,57	0/1:12,7:19:18.01:165,0,18	0/0:25,1:25:23.50:0,24,225	0/0:23,0:18:1.25:0,1,3	0/1:18,0:17:7.76:8,0,174	0/0:36,1:34:21.12:0,21,245	0/0:12,0:13:3.01:0,3,33	1/1:15,5:19:24.06:315,24,0	0/0:13,0:15:11.52:0,12,68	0/0:10,0:16:11.36:0,11,56	0/1:24,0:24:2.04:2,0,137	0/1:15,0:14:19.07:19,0,27	0/0:20,0:23:18.53:0,19,208	0/0:18,0:20:6.23:0,6,193	1/1:10,0:10:2.98:22,3,0	1/1:25,0:25:2.95:48,3,0	./.	0/0:15,0:16:7.08:0,7,41	0/1:16,2:18:25.67:39,0,26	1/1:24,9:34:35.63:570,36,0	0/0:10,0:15:5.68:0,6,28	0/1:24,0:21:10.75:40,0,11	./.	0/1:3,0:3:3.33:24,0,3
chr10	83388386	.	C	CAG	1069.17	PASS	AB=1.000;AC=14;AF=0.269;AN=52;BaseQRankSum=6.743;DP=597;FS=1.743;HRun=0;HaplotypeScore=134.9276;InbreedingCoeff=0.5463;MQ=48.48;MQ0=11;MQRankSum=-2.345;QD=5.97;ReadPosRankSum=2.589;VQSLOD=3.5051;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:29.68:0,30,458	./.	0/0:22,0:13:39.03:0,39,372	0/0:15,0:13:38.86:0,39,384	0/0:23,0:22:20.91:0,21,161	0/1:20,0:20:44.52:45,0,195	0/0:32,0:26:51:0,51,543	1/1:22,0:16:21.02:259,21,0	0/0:18,0:17:32.94:0,33,405	0/0:41,0:36:85.72:0,86,776	0/0:15,0:14:5.93:0,6,61	0/1:23,0:22:43.26:123,0,43	0/0:17,0:16:30.32:0,30,237	0/0:15,0:15:23.88:0,24,180	0/0:28,0:25:40.28:0,40,425	0/0:16,0:15:17.82:0,18,169	0/0:27,0:27:57.63:0,58,567	0/0:26,0:25:60.30:0,60,584	1/1:9,0:9:8.96:83,9,0	1/1:23,4:27:50.17:407,50,0	./.	0/0:18,0:17:11.96:0,12,102	0/1:20,0:20:2.04:2,0,190	0/1:40,0:40:99:200,0,132	0/0:19,0:19:8.94:0,9,68	0/0:25,0:22:33.88:0,34,320	1/1:12,1:11:17.68:111,18,0	1/1:5,0:5:2.16:7,2,0
chr10	83388419	.	ACG	A	650.03	PASS	AB=0.994;AC=13;AF=0.250;AN=52;BaseQRankSum=2.731;DP=604;FS=53.629;HRun=0;HaplotypeScore=134.2519;InbreedingCoeff=0.2529;MQ=42.16;MQ0=17;MQRankSum=-3.089;QD=3.28;ReadPosRankSum=-1.152;VQSLOD=0.8867;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,1:38:26.25:0,26,454	0/0:3,0:3:5.96:0,6,44	0/0:29,0:7:20.84:0,21,160	0/0:45,0:11:32.37:0,32,235	0/0:18,0:18:22.27:0,22,134	0/0:23,0:23:44.65:0,45,439	0/0:35,0:28:32.49:0,32,466	0/0:5,0:2:5.98:0,6,60	0/1:16,0:15:2.07:2,0,307	0/0:38,0:34:37.78:0,38,553	0/0:17,1:18:22.80:0,23,206	0/1:24,0:23:76.82:77,0,99	0/0:13,0:12:0.46:0,0,30	0/1:18,0:18:3.56:4,0,56	0/0:30,1:28:3.82:0,4,234	0/1:13,0:12:7.08:7,0,140	0/0:24,0:24:29.71:0,30,497	0/0:28,0:27:13.76:0,14,453	1/1:8,0:5:6.81:42,7,0	0/1:21,0:21:11.74:12,0,61	./.	0/1:17,0:16:2.06:2,0,20	0/0:16,0:16:20.99:0,21,230	0/1:45,2:47:54.60:55,0,380	0/0:21,0:21:19.71:0,20,127	1/1:25,3:25:50.80:479,51,0	./.	1/1:6,0:6:11.99:118,12,0
chr10	83388525	.	A	AAACC	352.73	PASS	AB=0.959;AC=16;AF=0.296;AN=54;BaseQRankSum=13.170;DP=980;FS=20.315;HRun=0;HaplotypeScore=291.3767;InbreedingCoeff=-0.1905;MQ=34.39;MQ0=111;MQRankSum=-10.591;QD=0.64;ReadPosRankSum=-10.805;VQSLOD=-0.5920;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:46,1:46:24.05:0,24,791	0/1:13,1:12:7.69:8,0,280	./.	0/0:6,0:2:3.01:0,3,42	0/1:40,1:35:7.96:8,0,134	0/0:23,0:21:25.58:0,26,571	0/0:51,0:34:16.50:0,16,719	0/0:69,0:16:30.20:0,30,432	0/1:33,3:34:53.55:54,0,756	0/1:81,2:54:43.20:43,0,2209	0/0:28,0:26:9.08:0,9,350	0/1:35,1:36:99:113,0,657	0/0:32,2:32:6.63:0,7,891	0/1:33,1:33:1.76:2,0,374	0/1:55,1:44:17.67:18,0,759	0/0:27,0:24:2.82:0,3,418	0/0:28,0:25:63.02:0,63,1095	0/0:27,0:25:63.20:0,63,1280	0/0:17,0:8:6.20:0,6,145	1/1:17,0:11:2.70:7,3,0	0/1:36,0:19:8.11:8,0,176	0/1:39,0:37:2.43:2,0,290	0/1:49,0:44:44.56:45,0,327	0/0:53,0:53:73.99:0,74,1371	0/1:32,1:31:41.24:41,0,359	0/1:54,1:40:99:140,0,1385	1/1:12,0:7:0.41:0,0,0	0/0:14,0:13:36.11:0,36,689
chr10	83388556	.	T	TC	273.73	PASS	AB=0.885;AC=7;AF=0.135;AN=52;BaseQRankSum=3.831;DP=714;FS=17.006;HRun=0;HaplotypeScore=169.4012;InbreedingCoeff=0.0816;MQ=35.34;MQ0=55;MQRankSum=-2.117;QD=2.23;ReadPosRankSum=-2.127;VQSLOD=1.8587;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:18.21:0,18,287	0/0:9,0:9:11.74:0,12,167	0/0:37,0:5:15.05:0,15,210	0/0:29,0:5:12.93:0,13,170	0/0:21,0:20:3.01:0,3,42	0/1:11,2:12:38.30:38,0,76	0/0:26,3:26:8.60:0,9,314	0/0:38,0:3:5.95:0,6,60	0/0:31,0:30:36.47:0,36,386	0/0:54,0:42:99:0,112,1354	0/0:13,0:12:9.03:0,9,126	0/1:24,5:29:74:74,0,373	0/1:22,4:26:49.11:49,0,437	0/0:28,2:30:21.89:0,22,267	0/0:37,5:36:32.36:0,32,409	0/0:22,0:20:16.94:0,17,233	0/0:18,0:17:27.09:0,27,377	0/0:19,0:19:31.77:0,32,531	0/1:20,2:8:78.81:79,0,84	./.	1/1:15,6:12:9:144,9,0	0/0:27,4:28:11.77:0,12,167	0/0:25,3:27:17.13:0,17,220	0/0:36,3:39:13.09:0,13,325	0/0:18,0:17:15.67:0,16,211	0/0:36,0:28:69.01:0,69,848	./.	0/1:11,1:11:17.74:18,0,346
chr10	83388570	.	CAG	C	95.60	PASS	AB=0.935;AC=11;AF=0.196;AN=56;BaseQRankSum=6.295;DP=569;FS=0.873;HRun=0;HaplotypeScore=129.8371;InbreedingCoeff=-0.0906;MQ=35.47;MQ0=32;MQRankSum=-4.226;QD=0.51;ReadPosRankSum=-1.118;VQSLOD=2.3690;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,1:36:15.02:0,15,195	0/0:5,1:6:5.94:0,6,80	0/0:37,0:5:14.94:0,15,201	0/1:29,0:5:0.73:1,0,39	0/0:14,0:13:2.99:0,3,24	0/0:10,1:10:2.98:0,3,24	0/0:21,2:21:6.56:0,7,147	0/0:24,0:2:3.01:0,3,36	0/0:24,4:27:8.79:0,9,156	0/0:32,0:29:45.41:0,45,802	0/0:9,1:9:9.02:0,9,117	0/1:20,6:26:35.07:35,0,106	0/1:21,2:23:48.08:48,0,112	0/1:22,3:25:20.73:21,0,94	0/0:33,4:31:14.65:0,15,182	0/0:15,1:15:1.55:0,2,65	0/0:16,0:15:3.49:0,3,280	0/1:17,0:17:1.55:2,0,400	0/1:11,1:4:10.92:35,0,11	0/0:4,0:4:0:0,0,0	1/1:14,2:11:2.96:21,3,0	0/0:18,1:19:10.71:0,11,108	0/0:22,0:21:5.75:0,6,32	0/0:35,1:36:12.02:0,12,189	0/0:11,1:11:5.98:0,6,80	0/1:24,1:23:45.45:45,0,478	0/1:3,0:3:10.12:10,0,11	0/1:9,1:10:1.11:1,0,134
chr10	83410393	.	AT	A	966.10	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.350;DP=350;FS=25.221;HRun=8;HaplotypeScore=40.7790;InbreedingCoeff=0.8672;MQ=60.82;MQ0=1;MQRankSum=-1.466;QD=17.57;ReadPosRankSum=-2.657;VQSLOD=1.4844;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:63.16:0,63,737	0/0:10,0:10:27.08:0,27,319	0/0:12,0:5:9.17:0,9,91	0/0:11,0:8:10.65:0,11,70	0/0:13,0:13:36.04:0,36,414	0/0:20,0:20:54.10:0,54,634	0/0:6,0:6:12.04:0,12,145	1/1:5,17:21:48.05:457,48,0	0/0:14,0:14:33.10:0,33,397	0/0:18,0:18:51.15:0,51,605	0/0:15,0:15:39.12:0,39,466	0/0:6,0:6:12:0,12,130	0/0:4,0:4:9.03:0,9,109	0/0:4,0:4:9.03:0,9,109	0/0:7,0:7:21:0,21,235	0/0:13,0:13:36.06:0,36,415	0/0:27,0:27:63.18:0,63,748	0/0:23,0:23:63.19:0,63,758	1/1:5,14:19:42.01:388,42,0	1/1:2,5:7:15.02:145,15,0	1/1:3,0:3:6:53,6,0	0/0:6,0:6:14.98:0,15,160	0/0:8,0:8:18.06:0,18,217	0/0:4,0:4:6.02:0,6,72	0/0:14,0:14:42.13:0,42,507	0/0:22,0:22:60.18:0,60,724	1/1:2,2:4:9.01:87,9,0	0/0:11,0:11:33.10:0,33,399
chr10	83410556	.	GT	G	4054.27	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.849;DP=521;FS=14.655;HRun=1;HaplotypeScore=55.0128;InbreedingCoeff=0.9940;MQ=59.52;MQ0=0;MQRankSum=0.755;QD=38.25;ReadPosRankSum=0.141;VQSLOD=2.3377;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1800	0/0:11,0:10:30.10:0,30,468	0/0:13,0:13:36.09:0,36,539	0/0:30,0:26:70.43:0,70,1065	0/0:13,0:13:33.11:0,33,526	0/0:13,0:13:39.13:0,39,620	0/0:27,0:27:69.16:0,69,1002	1/1:0,29:28:84.23:1121,84,0	0/0:15,0:15:45.15:0,45,719	0/0:17,0:16:45.15:0,45,714	0/0:10,0:10:30.04:0,30,421	0/0:13,0:13:39.13:0,39,620	0/0:13,0:13:39.12:0,39,599	0/0:7,0:7:21.07:0,21,336	0/0:17,0:17:48.16:0,48,766	0/0:13,0:13:39.13:0,39,618	0/0:40,0:40:99:0,120,1912	0/0:28,0:28:84.29:0,84,1343	1/1:0,6:5:15.05:210,15,0	1/1:0,15:15:42.14:587,42,0	1/1:0,45:45:99:1801,129,0	0/0:12,0:12:36.12:0,36,568	0/0:15,0:15:42.14:0,42,670	0/0:25,0:25:75.24:0,75,1166	0/0:16,0:15:42.14:0,42,665	0/0:21,0:21:60.20:0,60,950	1/1:0,11:11:24.08:336,24,0	0/0:8,0:8:24.08:0,24,384
chr10	83410926	.	TC	T	1961.61	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.236;DP=641;FS=16.351;HRun=1;HaplotypeScore=102.6316;InbreedingCoeff=0.9874;MQ=81.58;MQ0=0;MQRankSum=-12.199;QD=27.24;ReadPosRankSum=-1.937;VQSLOD=1.9937;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,157,2490	0/0:14,0:14:42.14:0,42,663	0/0:19,0:19:57.19:0,57,909	0/0:20,0:20:60.20:0,60,952	0/0:18,0:18:48.15:0,48,744	0/0:20,0:20:60.20:0,60,957	0/0:28,0:28:84.29:0,84,1343	1/1:0,18:18:33.11:428,33,0	0/0:36,0:36:99:0,105,1653	0/0:32,0:32:96.33:0,96,1535	0/0:10,0:10:30.09:0,30,454	0/0:28,0:28:84.29:0,84,1343	0/0:31,0:31:93.32:0,93,1487	0/0:17,0:17:51.17:0,51,815	0/0:43,0:43:99:0,129,2040	0/0:28,0:28:84.29:0,84,1343	0/0:24,0:24:72.25:0,72,1145	0/0:26,0:26:78.22:0,78,1219	1/1:0,6:6:12.04:156,12,0	1/1:0,13:13:33.11:428,33,0	1/1:0,12:12:13.70:227,14,0	0/0:17,0:16:42.14:0,42,672	0/0:18,0:18:54.18:0,54,861	0/0:36,0:36:99:0,108,1678	0/0:16,0:15:45.15:0,45,719	0/0:22,0:22:66.23:0,66,1055	1/1:0,23:23:69.22:895,69,0	0/0:12,0:12:33.11:0,33,528
chr10	83411338	.	G	GA	889.09	PASS	AB=0.669;AC=8;AF=0.190;AN=42;BaseQRankSum=0.660;DP=420;FS=8.361;HRun=7;HaplotypeScore=123.9945;InbreedingCoeff=0.6319;MQ=39.07;MQ0=44;MQRankSum=-1.327;QD=10.98;ReadPosRankSum=-2.779;VQSLOD=1.1161;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:47:41.79:0,42,577	0/0:13,0:13:18.02:0,18,173	./.	./.	1/1:16,11:25:7.16:347,7,0	0/0:14,0:12:15.79:0,16,168	0/0:28,0:25:41.56:0,42,381	./.	0/0:11,0:9:11.98:0,12,115	0/0:24,0:23:60.01:0,60,566	0/0:10,0:10:11.96:0,12,116	0/0:14,0:13:20.79:0,21,196	1/1:7,4:11:24.51:220,25,0	0/1:4,7:8:7.13:177,0,7	0/0:18,0:17:15.91:0,16,168	0/0:10,0:8:11.89:0,12,114	0/0:30,0:26:12.89:0,13,134	0/0:26,0:23:29.90:0,30,283	./.	./.	./.	0/1:10,6:11:11.13:134,0,11	0/0:15,0:15:26.87:0,27,258	0/0:13,0:12:5.53:0,6,57	1/1:9,7:9:12.91:146,13,0	0/0:25,0:23:35.94:0,36,335	./.	0/0:25,0:21:31.88:0,32,304
chr10	83412442	.	A	AG	4280.06	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.965;DP=630;FS=0.402;HRun=3;HaplotypeScore=88.3086;InbreedingCoeff=0.9974;MQ=82.40;MQ0=0;MQRankSum=-2.430;QD=33.44;ReadPosRankSum=-1.846;VQSLOD=4.3016;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.28:0,93,1110	0/0:8,0:8:18.04:0,18,216	0/0:20,0:20:47.55:0,48,493	0/0:16,0:16:33.08:0,33,381	0/0:17,0:17:48.15:0,48,576	0/0:20,0:20:60.16:0,60,696	0/0:27,0:27:75.23:0,75,900	1/1:4,21:25:63.20:863,63,0	0/0:21,0:21:60.18:0,60,719	0/0:14,0:14:42.13:0,42,504	0/0:17,0:17:31.25:0,31,366	0/0:29,0:29:75.22:0,75,888	0/0:23,0:23:66.16:0,66,776	0/0:27,0:27:75.23:0,75,899	0/0:28,0:28:81.25:0,81,971	0/0:22,0:22:57.17:0,57,684	0/0:33,0:33:96.26:0,96,1127	0/0:33,0:33:93.28:0,93,1116	1/1:1,19:20:48.16:669,48,0	1/1:2,16:18:48.16:670,48,0	1/1:1,42:43:99:1365,100,0	0/0:21,0:21:54.16:0,54,645	0/0:16,0:16:42.13:0,42,501	0/0:31,0:31:90.17:0,90,1033	0/0:13,0:13:33.10:0,33,396	0/0:22,0:22:66.17:0,66,766	1/1:3,19:22:51.17:714,51,0	0/0:12,0:12:24.05:0,24,276
chr10	83412938	.	T	TA	4291.68	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.922;DP=571;FS=2.890;HRun=1;HaplotypeScore=69.5694;InbreedingCoeff=0.9976;MQ=77.39;MQ0=0;MQRankSum=-2.719;QD=39.74;ReadPosRankSum=-2.635;VQSLOD=4.4648;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1257	0/0:11,0:11:33.11:0,33,428	0/0:15,0:15:45.05:0,45,515	0/0:14,0:13:19.20:0,19,280	0/0:25,0:25:75.22:0,75,945	0/0:23,0:23:69.22:0,69,882	0/0:15,0:15:45.15:0,45,583	1/1:0,34:34:99:1341,102,0	0/0:20,0:20:60.18:0,60,764	0/0:25,0:25:69.21:0,69,871	0/0:17,0:17:48.14:0,48,609	0/0:19,0:19:57.17:0,57,726	0/0:13,0:13:39.13:0,39,506	0/0:16,0:16:48.16:0,48,619	0/0:19,0:19:57.19:0,57,740	0/0:8,0:8:24.06:0,24,285	0/0:37,0:37:99:0,108,1383	0/0:20,0:20:57.11:0,57,690	1/1:1,12:13:39.01:514,39,0	1/1:0,21:21:63.13:894,63,0	1/1:0,29:29:75.17:1094,75,0	0/0:26,0:26:78.22:0,78,972	0/0:22,0:22:66.21:0,66,843	0/0:20,0:20:57.14:0,57,720	0/0:25,0:25:72.20:0,72,894	0/0:29,0:29:87.26:0,87,1103	1/1:0,11:11:30:449,30,0	0/0:9,0:9:27.02:0,27,290
chr10	83413071	.	T	TC	620.41	PASS	AB=0.755;AC=4;AF=0.071;AN=56;BaseQRankSum=-5.066;DP=542;FS=0.811;HRun=1;HaplotypeScore=73.2030;InbreedingCoeff=0.0138;MQ=53.90;MQ0=21;MQRankSum=-2.814;QD=6.67;ReadPosRankSum=-2.110;VQSLOD=-0.2341;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:29.29:0,29,306	0/0:5,0:5:7.73:0,8,68	0/0:12,0:4:12.02:0,12,131	0/0:21,0:4:7.27:0,7,79	0/0:27,0:26:36.33:0,36,399	0/0:30,0:30:77.95:0,78,915	0/1:19,0:19:33.45:33,0,114	0/1:16,23:31:99:488,0,337	0/0:21,0:21:54.09:0,54,671	0/0:11,0:11:33:0,33,398	0/0:19,0:18:42.58:0,43,515	0/0:17,0:16:40.11:0,40,477	0/0:14,0:14:27.13:0,27,301	0/0:16,0:16:39.37:0,39,448	0/0:13,0:13:32.89:0,33,377	0/0:13,0:13:36.03:0,36,442	0/0:26,0:26:63.11:0,63,757	0/0:14,0:14:27.81:0,28,313	0/1:7,8:14:65.72:177,0,66	0/1:13,7:20:30.29:30,0,99	0/0:7,7:10:0:0,0,0	0/0:21,0:21:25.32:0,25,308	0/0:25,0:25:50.30:0,50,571	0/0:20,0:20:48.07:0,48,595	0/0:21,0:21:33.05:0,33,377	0/0:18,0:18:43.59:0,44,454	0/0:8,2:20:2.10:0,2,119	0/0:23,0:23:37.68:0,38,321
chr10	83415763	.	C	CA	5947.66	PASS	AB=0.532;AC=13;AF=0.232;AN=56;BaseQRankSum=15.395;DP=588;FS=1.144;HRun=1;HaplotypeScore=72.9224;InbreedingCoeff=0.8996;MQ=75.60;MQ0=0;MQRankSum=-6.058;QD=40.46;ReadPosRankSum=2.346;VQSLOD=5.5301;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.26:0,96,1200	0/0:9,0:9:27.04:0,27,319	0/0:18,0:18:45.11:0,45,552	0/0:22,0:22:56.10:0,56,744	1/1:0,34:34:87.17:1222,87,0	0/0:18,0:18:54.18:0,54,700	0/0:20,0:20:60.16:0,60,739	0/0:16,0:16:42.14:0,42,540	0/0:22,0:22:66.21:0,66,856	0/0:29,0:29:75.15:0,75,917	0/0:20,0:20:59.83:0,60,720	0/0:21,0:21:63.17:0,63,777	1/1:0,20:20:60.20:898,60,0	1/1:0,15:15:45.15:673,45,0	0/0:27,0:27:78.24:0,78,998	0/0:21,0:21:60.19:0,60,779	0/0:29,0:29:87.22:0,87,1070	0/0:16,0:16:48.14:0,48,607	0/0:17,0:17:51.14:0,51,626	0/0:13,0:13:39.13:0,39,506	0/0:16,0:16:42.06:0,42,497	1/1:0,17:17:45.15:671,45,0	0/0:17,0:17:51.12:0,51,618	0/0:29,0:28:87.27:0,87,1116	1/1:1,19:20:60.14:850,60,0	0/1:3,22:25:41.57:914,0,42	0/0:28,0:27:84.25:0,84,1072	1/1:0,16:16:48.16:719,48,0
chr10	83415804	.	C	CA	2254.89	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.390;DP=572;FS=6.187;HRun=6;HaplotypeScore=80.6457;InbreedingCoeff=0.9923;MQ=74.34;MQ0=0;MQRankSum=-8.666;QD=26.84;ReadPosRankSum=-0.248;VQSLOD=3.7927;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,111,1088	0/0:7,0:7:14.95:0,15,152	0/0:18,0:18:37.67:0,38,392	0/0:24,0:24:56.56:0,57,541	1/1:10,16:26:54.10:632,54,0	0/0:15,0:15:45.09:0,45,452	0/0:13,0:13:39.09:0,39,398	0/0:26,0:26:72.15:0,72,729	0/0:20,0:20:51.07:0,51,505	0/0:28,0:28:84.19:0,84,853	0/0:17,0:17:48.11:0,48,489	0/0:16,0:16:39.09:0,39,397	1/1:4,11:15:39.11:469,39,0	1/1:3,5:8:15.05:187,15,0	0/0:30,0:30:84.17:0,84,850	0/0:17,0:17:48.11:0,48,490	0/0:30,0:30:78.12:0,78,779	0/0:15,0:15:42.09:0,42,428	0/0:17,0:17:48.05:0,48,465	0/0:17,0:17:45.10:0,45,459	0/0:16,0:16:41.31:0,41,405	1/1:6,8:14:33.09:394,33,0	0/0:25,0:25:75.17:0,75,765	0/0:27,0:27:75.13:0,75,754	1/1:1,20:21:60.19:748,60,0	0/0:25,0:25:63.47:0,63,349	0/0:25,0:24:72.16:0,72,734	0/0:18,0:18:31.22:0,31,153
chr10	83416017	.	G	GGA	5082.85	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.640;DP=535;FS=7.004;HRun=0;HaplotypeScore=75.4531;InbreedingCoeff=0.9974;MQ=87.54;MQ0=1;MQRankSum=-2.184;QD=47.95;ReadPosRankSum=2.699;VQSLOD=5.6789;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:87.29:0,87,1239	0/0:7,0:7:18.06:0,18,258	0/0:22,0:22:63.21:0,63,887	0/0:22,0:22:57.16:0,57,777	1/1:1,21:23:50.97:934,51,0	0/0:21,0:21:60.20:0,60,860	0/0:28,0:28:81.27:0,81,1161	0/0:18,0:18:51.17:0,51,730	0/0:19,0:19:57.19:0,57,817	0/0:18,0:18:54.17:0,54,758	0/0:16,0:16:48.15:0,48,670	0/0:19,0:19:54.18:0,54,774	1/1:0,11:11:30.10:550,30,0	1/1:0,12:11:33.11:604,33,0	0/0:27,0:27:75.25:0,75,1074	0/0:15,0:15:45.15:0,45,645	0/0:30,0:30:87.29:0,87,1246	0/0:21,0:21:60.20:0,60,860	0/0:11,0:11:27.09:0,27,386	0/0:15,0:15:42.14:0,42,602	0/0:44,0:44:99:0,126,1802	1/1:2,13:15:42.13:740,42,0	0/0:8,0:8:24.07:0,24,326	0/0:14,0:14:39.13:0,39,559	1/1:1,10:11:24.08:440,24,0	1/1:1,16:17:48.16:880,48,0	0/0:20,0:20:48.16:0,48,688	1/1:0,17:17:51.17:935,51,0
chr10	83416211	.	TGCGTGC	T	556.86	PASS	AB=0.958;AC=12;AF=0.214;AN=56;BaseQRankSum=6.451;DP=479;FS=10.154;HRun=0;HaplotypeScore=121.4463;InbreedingCoeff=0.7646;MQ=52.20;MQ0=9;MQRankSum=-1.051;QD=6.87;ReadPosRankSum=-0.672;VQSLOD=1.6018;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:20.11:0,20,204	0/0:8,0:8:24.08:0,24,450	0/0:17,0:6:14.84:0,15,208	0/0:22,0:16:42.03:0,42,649	1/1:9,0:9:5.92:42,6,0	0/0:18,0:18:45.11:0,45,872	0/0:26,0:25:22.95:0,23,250	0/0:24,0:24:66.80:0,67,1037	0/0:15,0:15:42.02:0,42,769	0/0:8,0:8:24.08:0,24,461	0/0:6,0:6:14.98:0,15,222	0/0:20,0:20:50.96:0,51,869	1/1:12,0:12:0.31:129,0,0	1/1:8,0:8:12:115,12,0	0/0:14,0:14:42.06:0,42,869	0/0:10,0:10:30.10:0,30,717	0/0:21,0:21:25.22:0,25,1288	0/0:22,0:22:64.71:0,65,1302	0/0:19,0:17:48.08:0,48,742	0/0:13,0:13:33.11:0,33,789	0/0:57,0:56:99:0,139,2480	1/1:10,0:11:5.90:61,6,0	0/0:9,0:9:18.03:0,18,330	0/0:32,0:31:81.07:0,81,1837	0/1:10,0:11:0.20:0,0,0	1/1:5,18:23:24.33:288,24,0	0/0:14,0:14:36.18:0,36,664	0/1:7,0:7:4.39:76,0,4
chr10	83416217	.	CGTGT	C	50.75	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=3.400;DP=488;FS=0.000;HRun=0;HaplotypeScore=109.1108;InbreedingCoeff=0.4792;MQ=50.47;MQ0=9;MQRankSum=-1.770;QD=0.74;ReadPosRankSum=2.089;VQSLOD=1.8874;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:21:0.12:39,0,0	0/0:9,0:9:17.99:0,18,212	0/0:14,0:4:2.94:0,3,18	0/0:16,0:11:12:0,12,116	0/0:7,0:7:2.99:0,3,24	0/0:17,0:19:29.98:0,30,416	1/1:11,11:22:6.02:97,6,0	0/0:25,0:26:56.69:0,57,614	0/0:15,0:15:32.99:0,33,474	0/0:10,0:10:21.04:0,21,291	0/0:6,0:6:12.01:0,12,140	0/0:17,0:17:23.99:0,24,464	0/1:13,0:13:1.12:1,0,20	0/0:11,0:11:6.46:0,6,50	0/0:12,0:12:21.06:0,21,431	0/0:12,0:12:29.77:0,30,409	0/0:24,0:24:53.91:0,54,863	0/0:23,0:23:44.90:0,45,719	0/0:19,0:16:14.95:0,15,201	0/0:13,0:13:27.05:0,27,439	0/0:58,0:61:96.10:0,96,1034	1/1:11,0:11:2.56:20,3,0	0/0:9,0:9:9.03:0,9,165	0/0:40,0:38:71.79:0,72,1041	0/0:14,0:14:5.99:0,6,49	0/0:22,0:22:11.99:0,12,76	0/0:13,0:13:30.48:0,30,420	0/0:6,0:6:5.67:0,6,36
chr10	83416238	.	GTATGTGTA	G	809.74	PASS	AB=0.963;AC=15;AF=0.288;AN=52;BaseQRankSum=5.218;DP=458;FS=12.095;HRun=0;HaplotypeScore=132.0575;InbreedingCoeff=0.5530;MQ=47.77;MQ0=10;MQRankSum=-3.120;QD=5.91;ReadPosRankSum=-4.066;VQSLOD=0.4280;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:26:11.32:106,11,0	0/1:8,0:8:25.18:25,0,345	./.	0/0:5,0:1:2.74:0,3,12	./.	0/0:17,0:17:30.20:0,30,642	1/1:25,0:24:8.38:63,8,0	0/0:30,0:29:76.55:0,77,1151	0/0:18,0:18:41.74:0,42,932	0/0:8,0:7:21.07:0,21,670	0/0:8,0:8:9:0,9,134	0/1:17,0:17:5.08:5,0,828	1/1:9,0:9:0.68:106,1,0	1/1:10,0:10:12:143,12,0	0/0:13,0:13:10.35:0,10,851	0/0:10,0:10:30.09:0,30,768	0/0:25,0:26:15.61:0,16,1434	0/0:21,0:21:56.36:0,56,1365	0/0:13,0:10:24.02:0,24,323	0/0:12,0:12:29.47:0,29,636	0/0:48,0:47:7.74:0,8,2028	1/1:10,0:10:2.83:16,3,0	0/0:11,0:11:12.02:0,12,258	0/0:40,0:38:87.34:0,87,1841	0/0:14,0:13:2.21:0,2,11	1/1:22,0:22:24.61:379,25,0	0/0:13,0:13:33.10:0,33,674	0/1:7,0:8:7.46:131,0,7
chr10	83416246	.	ATG	A	240.04	PASS	AB=0.940;AC=13;AF=0.232;AN=56;BaseQRankSum=2.704;DP=470;FS=1.775;HRun=0;HaplotypeScore=91.5928;InbreedingCoeff=-0.1556;MQ=47.52;MQ0=13;MQRankSum=0.580;QD=1.02;ReadPosRankSum=1.142;VQSLOD=1.5639;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:25:0:0,0,1	0/0:10,0:10:10.48:0,10,220	0/0:7,0:1:2.99:0,3,23	0/0:9,0:2:2.90:0,3,16	0/0:10,0:10:2.99:0,3,24	0/1:19,0:19:72.39:72,0,257	0/0:28,0:27:5.92:0,6,48	0/1:29,0:28:35.53:36,0,209	0/1:16,2:18:1.55:2,0,397	0/1:7,2:7:19.14:19,0,150	0/0:5,0:5:3.01:0,3,46	0/0:17,0:17:27.04:0,27,358	0/0:11,0:11:1.02:0,1,42	0/1:9,0:9:0:0,0,0	0/1:14,0:14:1.22:1,0,333	0/0:11,0:11:12.04:0,12,182	0/1:22,5:27:99:102,0,459	0/0:18,2:20:4.76:0,5,433	0/0:14,0:10:3.01:0,3,46	0/1:12,2:14:46.86:47,0,186	0/0:47,0:46:54.24:0,54,939	1/1:10,0:10:0.68:2,1,0	0/0:11,0:11:6.02:0,6,91	0/1:34,4:36:70.75:71,0,503	0/0:15,0:14:4.36:0,4,38	0/1:21,0:21:6.12:6,0,30	0/0:13,0:13:14.41:0,14,175	0/0:7,0:7:3.95:0,4,37
chr10	83417104	.	G	GA	984.11	PASS	AB=0.758;AC=6;AF=0.107;AN=56;BaseQRankSum=9.456;DP=582;FS=0.000;HRun=1;HaplotypeScore=83.4475;InbreedingCoeff=-0.1310;MQ=72.76;MQ0=2;MQRankSum=-5.794;QD=10.15;ReadPosRankSum=-1.974;VQSLOD=0.4803;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.20:0,63,864	0/0:5,0:5:15.05:0,15,210	0/0:31,0:22:35.52:0,36,605	0/0:36,0:23:35.73:0,36,384	0/0:20,5:24:0.92:0,1,525	0/0:14,0:14:42.14:0,42,587	0/0:27,0:27:81.25:0,81,1095	0/0:25,0:25:66.18:0,66,840	0/0:20,0:20:60.20:0,60,838	0/0:9,0:9:21.06:0,21,281	0/0:14,0:14:42.12:0,42,569	0/0:19,0:19:54.09:0,54,660	0/1:9,4:13:99:151,0,298	0/1:10,4:14:99:141,0,359	0/0:24,0:24:72.21:0,72,972	0/0:11,0:11:33.11:0,33,457	0/0:35,0:35:99:0,105,1362	0/0:23,0:23:69.23:0,69,963	0/0:15,0:15:42.13:0,42,568	0/0:18,0:18:51.16:0,51,684	0/0:36,0:36:81.98:0,82,1433	0/1:12,6:18:99:218,0,366	0/0:16,0:16:45.14:0,45,611	0/0:29,0:29:87.27:0,87,1183	0/1:14,7:21:99:267,0,485	0/1:17,5:22:99:171,0,569	0/0:29,0:29:87.23:0,87,1135	0/1:5,4:9:99:160,0,183
chr10	83417287	.	GT	G	2031.68	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.131;DP=484;FS=1.510;HRun=8;HaplotypeScore=55.0451;InbreedingCoeff=0.9858;MQ=66.48;MQ0=0;MQRankSum=-0.250;QD=21.85;ReadPosRankSum=0.155;VQSLOD=3.8986;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:55.05:0,55,655	0/0:9,0:9:24.07:0,24,290	0/0:21,0:19:45.10:0,45,499	0/0:23,0:20:10.31:0,10,277	1/1:1,22:23:57.08:549,57,0	0/0:16,0:17:51.02:0,51,593	0/0:7,0:7:18.06:0,18,217	0/0:22,0:22:48.12:0,48,551	0/0:13,0:13:39.12:0,39,471	0/0:23,0:23:57.16:0,57,676	0/0:17,0:17:51.16:0,51,615	0/0:14,0:14:42.13:0,42,507	1/1:2,11:13:30.04:290,30,0	1/1:0,12:12:30.05:290,30,0	0/0:18,0:18:54.17:0,54,652	0/0:15,0:15:42.11:0,42,495	0/0:36,0:36:93.26:0,93,1098	0/0:33,0:33:93.24:0,93,1105	0/0:25,1:26:37.21:0,37,721	0/0:16,0:16:39.12:0,39,468	0/0:8,0:7:24.07:0,24,290	1/1:2,6:8:15.02:145,15,0	0/0:19,0:19:51.15:0,51,605	0/0:14,0:14:42.13:0,42,507	1/1:0,19:19:51.08:492,51,0	1/1:2,8:10:24.04:232,24,0	0/0:20,0:20:51.15:0,51,605	1/1:0,8:8:24.04:232,24,0
chr10	83417570	.	AG	A	1810.36	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.079;DP=504;FS=22.343;HRun=7;HaplotypeScore=61.2853;InbreedingCoeff=0.9932;MQ=93.71;MQ0=1;MQRankSum=-2.126;QD=21.81;ReadPosRankSum=1.732;VQSLOD=2.1131;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.18:0,72,861	0/0:7,0:7:18.04:0,18,213	0/0:30,0:29:80.41:0,80,934	0/0:19,0:19:32.38:0,32,436	1/1:0,15:15:38.99:375,39,0	0/0:21,0:21:57.17:0,57,704	0/0:20,0:20:51.16:0,51,641	0/0:25,0:25:72.17:0,72,834	0/0:26,0:26:75.23:0,75,930	0/0:17,0:17:36.11:0,36,452	0/0:19,0:19:54.17:0,54,675	0/0:18,0:18:54.17:0,54,678	1/1:2,16:18:42.09:428,42,0	1/1:1,8:9:21.05:214,21,0	0/0:24,0:24:69.17:0,69,828	0/0:20,0:20:57.18:0,57,717	0/0:19,0:19:51.16:0,51,641	0/0:21,0:21:63.14:0,63,750	0/0:17,0:17:48.15:0,48,604	0/0:14,0:14:36.10:0,36,440	0/0:12,0:12:33.11:0,33,415	1/1:0,7:7:18.04:183,18,0	0/0:20,0:20:51.08:0,51,602	0/0:18,0:18:54.13:0,54,639	1/1:0,7:7:18.04:184,18,0	1/1:0,17:17:45.04:440,45,0	0/0:29,0:28:78.23:0,78,966	1/1:1,9:10:18.04:184,18,0
chr10	83417805	.	CA	C	916.86	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=5.634;DP=493;FS=2.072;HRun=8;HaplotypeScore=66.3147;InbreedingCoeff=0.6953;MQ=71.44;MQ0=4;MQRankSum=2.259;QD=11.32;ReadPosRankSum=0.212;VQSLOD=2.6009;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:31:78.13:753,78,0	0/0:9,0:9:27.06:0,27,312	0/0:37,0:18:19.87:0,20,250	0/1:34,0:19:0.69:1,0,90	0/0:13,0:13:21.47:0,21,82	0/0:21,0:21:58.42:0,58,691	1/1:2,14:16:26.17:284,26,0	0/0:26,0:26:69.20:0,69,813	0/0:25,0:25:72.22:0,72,868	0/0:23,0:22:54.14:0,54,626	0/0:26,0:26:69.21:0,69,833	0/0:9,0:9:21.06:0,21,253	0/0:2,0:2:4.82:0,5,17	0/0:2,0:2:4.23:0,4,15	0/0:17,0:17:51.13:0,51,595	0/0:24,0:24:69.21:0,69,833	0/0:28,0:28:78.71:0,79,943	0/0:14,0:14:36.11:0,36,434	0/0:20,0:20:51.16:0,51,612	0/0:20,0:20:54.17:0,54,650	0/0:5,0:5:6.02:0,6,72	0/0:3,0:3:8.02:0,8,33	0/0:18,0:18:48.15:0,48,579	0/0:6,0:6:18.06:0,18,217	0/0:11,0:10:19.44:0,19,68	0/0:12,0:12:18.05:0,18,56	0/0:33,0:35:95.99:0,96,1116	0/0:6,0:6:10.64:0,11,30
chr10	83417811	.	A	AC	1581.19	PASS	AB=0.607;AC=13;AF=0.232;AN=56;BaseQRankSum=10.058;DP=502;FS=52.183;HRun=0;HaplotypeScore=66.5161;InbreedingCoeff=0.8534;MQ=69.42;MQ0=4;MQRankSum=-6.265;QD=29.83;ReadPosRankSum=0.692;VQSLOD=0.1804;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:81.47:0,81,464	0/0:9,0:9:27.09:0,27,375	0/0:38,0:18:44.77:0,45,437	0/0:32,0:17:21.38:0,21,153	0/1:6,11:17:3.84:368,0,4	0/0:22,0:22:64.44:0,64,852	0/0:16,0:16:34.06:0,34,191	0/0:29,0:29:78.20:0,78,1009	0/0:25,0:25:75.24:0,75,1029	0/0:23,0:22:57.18:0,57,766	0/0:26,0:26:75.23:0,75,1014	0/0:10,0:10:30.06:0,30,369	1/1:0,2:2:6.02:87,6,0	1/1:0,2:2:6.02:87,6,0	0/0:17,0:17:51.16:0,51,698	0/0:25,0:25:75.23:0,75,1016	0/0:29,0:29:87.27:0,87,1181	0/0:15,0:15:39.11:0,39,524	0/0:19,0:19:51.16:0,51,711	0/0:19,0:19:54.18:0,54,749	0/0:4,0:4:6.02:0,6,83	1/1:0,3:3:9.03:129,9,0	0/0:18,0:18:51.09:0,51,693	0/0:6,0:6:18.06:0,18,251	1/1:1,10:10:27.09:391,27,0	1/1:2,10:12:33.10:438,33,0	0/0:35,0:35:78.18:0,78,1278	1/1:0,6:6:18.06:257,18,0
chr10	83417814	.	C	CA	420.55	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.453;DP=510;FS=18.572;HRun=8;HaplotypeScore=70.2364;InbreedingCoeff=0.7985;MQ=68.41;MQ0=3;MQRankSum=-5.294;QD=20.03;ReadPosRankSum=0.449;VQSLOD=2.2896;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.26:0,90,1041	0/0:9,0:9:27.08:0,27,334	0/0:35,0:16:12.19:0,12,369	0/0:30,0:16:26.39:0,26,188	0/0:17,0:17:20.80:0,21,111	0/0:23,0:23:66.18:0,66,792	0/0:17,0:17:27.63:0,28,400	0/0:29,0:29:81.22:0,81,984	0/0:26,0:26:78.25:0,78,964	0/0:24,0:23:57.18:0,57,706	0/0:26,0:26:72.23:0,72,892	0/0:10,0:10:27.07:0,27,322	0/0:2,0:2:5.52:0,6,25	0/0:2,0:2:5.29:0,5,22	0/0:18,0:18:54.15:0,54,654	0/0:25,0:25:72.22:0,72,880	0/0:31,0:31:87.26:0,87,1064	0/0:14,0:14:36.11:0,36,445	0/0:21,0:21:56.95:0,57,678	0/0:20,0:20:60.17:0,60,726	0/0:5,0:5:6.02:0,6,73	0/0:3,0:3:8.07:0,8,35	0/0:17,0:17:46.01:0,46,545	0/0:6,0:6:18.06:0,18,223	0/0:11,0:10:24.88:0,25,115	1/1:6,9:15:21.44:331,21,0	0/0:34,0:34:99:0,102,1218	1/1:0,6:6:18.05:208,18,0
chr10	83418033	.	GA	G	979.66	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.598;DP=606;FS=24.419;HRun=1;HaplotypeScore=87.2774;InbreedingCoeff=0.9817;MQ=89.27;MQ0=0;MQRankSum=-10.927;QD=13.80;ReadPosRankSum=-0.722;VQSLOD=1.4148;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,123,1735	0/0:10,0:10:30.09:0,30,437	0/0:23,0:23:64.37:0,64,822	0/0:26,0:26:59.33:0,59,877	1/1:4,6:10:12.40:53,12,0	0/0:20,0:20:54.17:0,54,803	0/0:32,0:32:96.30:0,96,1422	0/0:25,0:25:75.21:0,75,1038	0/0:31,0:31:93.30:0,93,1393	0/0:19,0:19:51.16:0,51,758	0/0:13,0:13:36.09:0,36,500	0/0:26,0:26:78.25:0,78,1169	1/1:2,10:12:35.45:264,35,0	1/1:3,15:18:47.91:313,48,0	0/0:30,0:30:90.21:0,90,1262	0/0:30,0:30:90.29:0,90,1353	0/0:36,0:36:99:0,108,1562	0/0:16,0:16:45.05:0,45,595	0/0:32,0:32:96.32:0,96,1415	0/0:12,0:12:36.12:0,36,547	0/0:39,0:39:99:0,111,1619	1/1:1,4:5:13.52:79,14,0	0/0:14,0:14:36.09:0,36,495	0/0:35,0:35:99:0,105,1545	1/1:5,3:8:12.06:96,12,0	1/1:4,9:13:26.28:233,26,0	0/0:21,0:21:63.16:0,63,879	1/1:0,5:5:14.95:135,15,0
chr10	83418038	.	G	GGGT	2187.93	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.854;DP=596;FS=20.544;HRun=0;HaplotypeScore=107.2965;InbreedingCoeff=0.9807;MQ=89.85;MQ0=0;MQRankSum=-11.376;QD=34.73;ReadPosRankSum=0.700;VQSLOD=2.8010;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,2160	0/0:10,0:10:30.10:0,30,549	0/0:24,0:24:69.18:0,69,1152	0/0:26,0:26:67.99:0,68,1049	1/1:0,6:9:15.05:199,15,0	0/0:22,0:22:60.18:0,60,1039	0/0:31,0:31:93.25:0,93,1592	0/0:26,0:26:75.23:0,75,1291	0/0:33,0:33:99:0,99,1736	0/0:18,0:18:48.15:0,48,823	0/0:12,0:12:36.11:0,36,630	0/0:28,0:28:78.24:0,78,1359	1/1:3,8:11:29.95:467,30,0	1/1:2,16:18:48.03:771,48,0	0/0:30,0:30:87.30:0,87,1583	0/0:28,0:28:84.29:0,84,1510	0/0:34,0:34:99:0,102,1847	0/0:17,0:17:45.13:0,45,791	0/0:32,0:32:90.20:0,90,1536	0/0:12,0:12:36.11:0,36,629	0/0:39,0:39:99:0,117,2047	1/1:0,4:5:15.05:210,15,0	0/0:14,0:14:36.11:0,36,627	0/0:33,0:33:99:0,99,1727	1/1:1,1:5:10.84:118,11,0	1/1:3,6:11:26.96:389,27,0	0/0:23,0:23:66.23:0,66,1201	1/1:0,3:4:12.04:228,12,0
chr10	83418274	.	G	GT	5105.45	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-9.511;DP=744;FS=7.278;HRun=1;HaplotypeScore=72.4463;InbreedingCoeff=0.9997;MQ=92.46;MQ0=0;MQRankSum=-2.785;QD=41.85;ReadPosRankSum=2.376;VQSLOD=5.3076;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,187,2393	0/0:10,0:10:30.10:0,30,389	0/0:36,0:36:99:0,105,1303	0/0:33,0:33:80.82:0,81,1002	1/1:0,12:12:36.12:539,36,0	0/0:31,0:31:93.29:0,93,1194	0/0:31,0:31:87.25:0,87,1099	0/0:23,0:23:69.20:0,69,862	0/0:27,0:27:78.24:0,78,999	0/0:20,0:20:60.18:0,60,757	0/0:26,0:26:78.25:0,78,999	0/0:26,0:26:75.23:0,75,956	1/1:1,16:17:45.15:674,45,0	1/1:0,25:25:75.21:1097,75,0	0/0:37,0:37:99:0,108,1371	0/0:32,0:32:96.28:0,96,1216	0/0:34,0:34:99:0,102,1308	0/0:20,0:20:60.19:0,60,778	0/0:23,0:23:66.21:0,66,857	0/0:23,0:23:69.22:0,69,896	0/0:42,0:42:99:0,123,1581	1/1:0,22:22:54.18:809,54,0	0/0:16,0:16:45.13:0,45,566	0/0:40,0:40:99:0,117,1501	1/1:0,15:15:45.15:675,45,0	1/1:0,21:21:63.19:908,63,0	0/0:29,0:29:87.28:0,87,1129	1/1:0,10:10:27.09:404,27,0
chr10	83419035	.	AAATG	A	3775.18	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.206;DP=789;FS=5.361;HRun=0;HaplotypeScore=165.1006;InbreedingCoeff=0.9665;MQ=69.12;MQ0=0;MQRankSum=-13.005;QD=26.97;ReadPosRankSum=-3.183;VQSLOD=2.6387;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:90.25:0,90,1962	0/0:16,0:16:45.12:0,45,1047	0/0:30,0:29:32.63:0,33,732	0/0:29,0:28:19.61:0,20,696	1/1:7,18:25:32.79:395,33,0	0/0:36,0:36:96.33:0,96,2352	0/0:22,0:22:51.03:0,51,1065	0/0:32,0:32:78.24:0,78,1737	0/0:36,0:36:93.30:0,93,2156	0/0:47,0:47:99:0,108,2401	0/0:32,0:32:75.22:0,75,1631	0/0:41,0:41:99:0,108,2543	1/1:2,17:19:39.01:608,39,0	1/1:8,14:22:39.13:654,39,0	0/0:37,0:37:99:0,99,2185	0/0:30,0:30:81.28:0,81,1984	0/0:16,0:16:36.12:0,36,889	0/0:14,0:14:33.11:0,33,804	0/0:17,0:17:36.12:0,36,824	0/0:37,0:37:87.29:0,87,2066	0/0:46,0:45:99:0,114,2813	1/1:5,18:23:48.05:731,48,0	0/0:30,0:30:72.25:0,72,1762	0/0:30,0:30:72.71:0,73,1663	1/1:4,16:20:39.05:621,39,0	1/1:10,18:28:48.09:717,48,0	0/0:30,0:30:75.23:0,75,1730	1/1:1,2:3:3.01:50,3,0
chr10	83419108	.	T	TATGC	380.51	PASS	AB=0.908;AC=6;AF=0.136;AN=44;BaseQRankSum=4.114;DP=734;FS=7.728;HRun=0;HaplotypeScore=132.0251;InbreedingCoeff=0.3438;MQ=56.25;MQ0=7;MQRankSum=-4.640;QD=5.14;ReadPosRankSum=-1.976;VQSLOD=1.6850;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:26:99:140,0,418	0/0:18,0:18:45.14:0,45,732	./.	./.	./.	0/0:40,0:40:99:0,99,1528	0/1:31,7:39:99:326,0,574	0/0:32,0:31:54.14:0,54,787	0/0:41,0:40:99:0,108,1594	0/0:45,0:45:99:0,108,1648	0/0:31,0:30:75.20:0,75,1147	0/0:57,0:57:99:0,150,2328	1/1:4,0:4:2.22:7,2,0	./.	0/0:53,0:54:99:0,123,1919	0/0:50,0:50:99:0,132,2112	0/0:13,0:13:30.05:0,30,451	0/0:24,0:24:57.12:0,57,870	0/0:21,0:20:51.12:0,51,761	0/0:41,0:41:99:0,99,1548	0/0:47,0:47:99:0,111,1694	1/1:3,0:3:0.47:1,0,0	0/0:37,0:37:99:0,105,1533	0/0:22,0:22:41.78:0,42,654	./.	0/0:10,0:10:24.08:0,24,388	0/0:45,0:44:99:0,126,1964	./.
chr10	83419237	.	A	AATGAG	2102.44	PASS	AB=0.526;AC=13;AF=0.232;AN=56;BaseQRankSum=12.102;DP=770;FS=13.889;HRun=0;HaplotypeScore=151.8760;InbreedingCoeff=0.8654;MQ=55.60;MQ0=2;MQRankSum=-8.881;QD=20.82;ReadPosRankSum=3.434;VQSLOD=2.7153;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,116,2410	0/0:25,0:25:75.22:0,75,1628	0/0:14,0:5:11.45:0,11,77	0/0:8,0:4:4.41:0,4,14	1/1:1,0:12:21.50:207,22,0	0/0:40,0:40:99:0,120,2758	0/0:34,0:33:89.25:0,89,1838	0/0:40,0:39:99:0,111,2320	0/0:42,0:41:99:0,120,2453	0/0:48,0:48:99:0,144,2941	0/0:30,0:30:87.27:0,87,1872	0/0:47,0:47:99:0,135,2959	1/1:0,0:11:24.08:337,24,0	1/1:0,0:16:21.07:297,21,0	0/0:42,0:41:99:0,126,2412	0/0:45,0:45:99:0,135,2886	0/0:21,0:21:60.19:0,60,1345	0/0:25,0:24:69.16:0,69,1459	0/0:19,0:19:57.17:0,57,1207	0/0:29,0:29:87.29:0,87,1847	0/0:33,0:32:96.14:0,96,1972	1/1:1,0:19:40.15:489,40,0	0/0:24,0:24:72.23:0,72,1566	0/0:33,0:33:96.28:0,96,2079	1/1:0,0:14:21.07:302,21,0	0/1:2,2:20:65.42:340,0,65	0/0:29,0:29:84.25:0,84,1827	1/1:0,0:9:18.06:319,18,0
chr10	83419503	.	A	AG	6707.17	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.679;DP=778;FS=2.311;HRun=2;HaplotypeScore=87.3995;InbreedingCoeff=1.0000;MQ=85.11;MQ0=0;MQRankSum=-11.387;QD=37.89;ReadPosRankSum=0.462;VQSLOD=5.2305;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,156,1920	0/0:20,0:20:60.18:0,60,731	0/0:20,0:20:57.17:0,57,685	0/0:38,0:38:95.98:0,96,1181	1/1:1,15:17:36.12:504,36,0	0/0:24,0:24:72.21:0,72,877	0/0:23,0:23:66.19:0,66,806	0/0:36,0:36:99:0,99,1198	0/0:27,0:27:78.24:0,78,967	0/0:33,0:33:90.27:0,90,1116	0/0:21,0:21:60.19:0,60,744	0/0:35,0:35:99:0,102,1252	1/1:1,31:32:90.30:1295,90,0	1/1:0,23:23:63.21:902,63,0	0/0:29,0:29:84.26:0,84,1041	0/0:27,0:27:81.25:0,81,1004	0/0:23,0:23:66.21:0,66,818	0/0:13,0:13:36.11:0,36,446	0/0:20,0:20:51.14:0,51,618	0/0:25,0:25:75.24:0,75,930	0/0:53,0:53:99:0,159,1945	1/1:1,19:20:57.11:771,57,0	0/0:20,0:20:60.19:0,60,743	0/0:36,0:36:99:0,108,1339	1/1:1,27:28:72.24:1028,72,0	1/1:2,29:31:47.12:1128,47,0	0/0:25,0:25:69.21:0,69,844	1/1:0,26:25:75.25:1079,75,0
chr10	83419631	.	C	CCAGGT	4740.12	PASS	AB=0.550;AC=13;AF=0.232;AN=56;BaseQRankSum=11.371;DP=595;FS=67.369;HRun=0;HaplotypeScore=120.1113;InbreedingCoeff=0.8617;MQ=89.97;MQ0=0;MQRankSum=-11.595;QD=83.16;ReadPosRankSum=0.780;VQSLOD=2.0976;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,150,3443	0/0:12,0:12:33.11:0,33,745	0/0:20,0:20:57.17:0,57,1278	0/0:31,0:31:84.02:0,84,1730	1/1:0,7:9:24.08:697,24,0	0/0:21,0:21:63.20:0,63,1397	0/0:22,0:22:66.23:0,66,1536	0/0:36,0:36:99:0,102,2329	0/0:30,0:30:90.31:0,90,2050	0/0:23,0:23:66.23:0,66,1537	0/0:18,0:19:51.17:0,51,1184	0/0:25,0:25:75.26:0,75,1745	1/1:1,5:6:15.05:498,15,0	1/1:0,9:10:27.09:893,27,0	0/0:30,0:30:90.30:0,90,2052	0/0:22,0:22:66.23:0,66,1538	0/0:30,0:29:87.28:0,87,1953	0/0:21,0:21:60.21:0,60,1398	0/0:19,0:19:54.17:0,54,1212	0/0:18,0:18:54.19:0,54,1234	0/0:25,0:25:75.26:0,75,1703	1/1:0,14:14:42.14:1291,42,0	0/0:8,0:8:21.07:0,21,465	0/0:44,0:44:99:0,129,2905	1/1:0,3:5:9.03:298,9,0	0/1:2,9:11:99:863,0,107	0/0:32,0:31:93.32:0,93,2164	1/1:0,2:2:6.02:199,6,0
chr10	83419764	.	GGTCTGTCT	G	3605.51	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.911;DP=507;FS=31.534;HRun=0;HaplotypeScore=134.0754;InbreedingCoeff=0.9706;MQ=76.04;MQ0=0;MQRankSum=-10.368;QD=41.92;ReadPosRankSum=0.854;VQSLOD=1.7762;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.23:0,66,2789	0/0:15,0:15:45.15:0,45,1799	0/0:18,0:17:29.41:0,29,944	0/0:23,0:22:30.59:0,31,880	1/1:8,9:17:30.05:645,30,0	0/0:26,0:26:57.20:0,57,2280	0/0:19,0:19:48.16:0,48,2016	0/0:25,0:25:48.13:0,48,1608	0/0:14,0:14:42.13:0,42,1594	0/0:22,0:22:63.21:0,63,2585	0/0:26,0:26:75.20:0,75,2702	0/0:17,0:17:42.10:0,42,1473	1/1:5,3:8:9.03:239,9,0	1/1:6,0:6:12:152,12,0	0/0:17,0:17:45.10:0,45,1606	0/0:13,0:13:39.13:0,39,1608	0/0:37,0:37:96.33:0,96,4036	0/0:22,0:22:63.22:0,63,2645	0/0:24,0:24:54.17:0,54,1892	0/0:13,0:13:39.12:0,39,1558	0/0:23,0:22:54.17:0,54,2096	1/1:3,9:12:15.01:339,15,0	0/0:6,0:6:15.05:0,15,639	0/0:9,0:9:24.07:0,24,919	1/1:1,21:22:57.20:1515,57,0	1/1:5,9:14:20.96:397,21,0	0/0:25,0:25:75.26:0,75,3004	1/1:0,7:7:12.04:319,12,0
chr10	83419878	.	T	TG	2675.89	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.457;DP=516;FS=10.522;HRun=0;HaplotypeScore=79.1141;InbreedingCoeff=0.9511;MQ=52.28;MQ0=5;MQRankSum=-11.811;QD=30.07;ReadPosRankSum=0.313;VQSLOD=2.6942;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1552	0/0:10,0:10:30.10:0,30,420	0/0:18,0:5:11.25:0,11,133	0/0:9,0:5:14.78:0,15,167	1/1:1,18:19:27.09:429,27,0	0/0:20,0:20:60.20:0,60,838	0/0:15,0:15:24.08:0,24,336	0/0:30,0:30:90.26:0,90,1208	0/0:15,0:15:42.14:0,42,586	0/0:17,0:17:48.16:0,48,666	0/0:25,0:25:72.24:0,72,1007	0/0:5,0:5:15.05:0,15,209	1/1:0,2:2:3.01:48,3,0	1/1:1,8:8:15.05:239,15,0	0/0:14,0:14:42.14:0,42,588	0/0:11,0:10:33.11:0,33,462	0/0:40,0:40:99:0,114,1560	0/0:22,0:22:60.18:0,60,820	0/0:22,0:20:57.19:0,57,793	0/0:19,0:19:54.14:0,54,733	0/0:30,0:30:87.26:0,87,1180	1/1:1,16:16:36.12:573,36,0	0/0:24,0:24:66.22:0,66,923	0/0:13,0:13:39.13:0,39,545	1/1:1,17:18:39.13:621,39,0	1/1:0,14:14:36.12:574,36,0	0/0:30,0:30:87.29:0,87,1213	1/1:0,10:8:24.08:383,24,0
chr10	83419937	.	G	GT	1457.17	PASS	AB=0.533;AC=11;AF=0.212;AN=52;BaseQRankSum=10.112;DP=463;FS=37.997;HRun=1;HaplotypeScore=64.9991;InbreedingCoeff=0.8351;MQ=52.51;MQ0=9;MQRankSum=-9.299;QD=29.14;ReadPosRankSum=0.324;VQSLOD=1.3421;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1509	0/0:11,0:11:33.09:0,33,442	./.	0/0:5,0:2:3.01:0,3,42	1/1:0,8:8:15.05:219,15,0	0/0:16,0:16:48.16:0,48,671	0/0:20,0:20:42.14:0,42,570	0/0:37,0:31:87.25:0,87,1194	0/0:11,0:11:33.09:0,33,443	0/0:19,0:19:57.17:0,57,777	0/0:18,0:18:54.16:0,54,721	0/0:12,0:12:36.12:0,36,502	./.	1/1:0,8:7:15.05:219,15,0	0/0:18,0:18:48.16:0,48,671	0/0:15,0:15:45.13:0,45,598	0/0:30,0:29:87.28:0,87,1201	0/0:25,0:24:72.24:0,72,1002	0/0:17,0:15:45.15:0,45,629	0/0:21,0:21:57.19:0,57,797	0/0:31,0:31:90.30:0,90,1258	1/1:0,8:8:24.08:329,24,0	0/0:13,0:13:36.12:0,36,503	0/0:24,0:24:69.21:0,69,936	1/1:1,11:11:30.10:433,30,0	0/1:1,7:8:20.90:248,0,21	0/0:29,0:29:84.28:0,84,1174	1/1:0,6:4:12.04:178,12,0
chr10	83420060	.	TGCC	T	131.43	PASS	AB=0.920;AC=5;AF=0.089;AN=56;BaseQRankSum=4.453;DP=620;FS=1.193;HRun=0;HaplotypeScore=115.5037;InbreedingCoeff=-0.0605;MQ=67.92;MQ0=0;MQRankSum=-4.839;QD=1.51;ReadPosRankSum=-4.865;VQSLOD=0.6022;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,3129	0/0:9,0:9:27.04:0,27,586	0/0:20,0:20:54.16:0,54,1160	0/0:23,0:23:69.18:0,69,1393	0/1:23,1:24:8.43:8,0,183	0/0:19,0:19:57.18:0,57,1253	0/0:30,0:30:87.28:0,87,1837	0/0:30,0:30:90.31:0,90,2031	0/0:21,0:21:63.22:0,63,1443	0/0:27,0:27:81.28:0,81,1832	0/0:18,0:18:54.18:0,54,1217	0/0:20,0:20:57.20:0,57,1289	0/1:4,2:6:14.19:64,0,14	0/1:18,0:17:4.61:5,0,173	0/0:28,0:28:84.29:0,84,1954	0/0:28,0:27:84.20:0,84,1838	0/0:27,0:27:78.27:0,78,1804	0/0:16,0:16:48.16:0,48,1098	0/0:23,0:23:66.23:0,66,1533	0/0:23,0:23:63.22:0,63,1468	0/0:25,0:25:75.26:0,75,1660	0/1:25,1:26:64.36:64,0,185	0/0:15,0:15:45.14:0,45,968	0/0:30,0:30:90.31:0,90,2006	0/1:12,1:13:36.94:99,0,37	0/0:22,0:22:43.19:0,43,311	0/0:30,0:30:90.31:0,90,2042	0/0:1,0:1:2.60:0,3,10
chr10	83420610	.	TTTTC	T	628.50	PASS	AB=1.000;AC=19;AF=0.380;AN=50;BaseQRankSum=5.946;DP=496;FS=1.520;HRun=0;HaplotypeScore=123.6747;InbreedingCoeff=0.1656;MQ=69.48;MQ0=2;MQRankSum=-1.450;QD=2.31;ReadPosRankSum=-3.879;VQSLOD=1.2811;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:21.83:70,0,22	0/0:11,0:11:18.06:0,18,262	./.	0/1:12,0:11:0:0,0,0	0/1:25,0:25:24.19:24,0,59	0/0:20,0:20:21.06:0,21,383	1/1:13,0:13:4.54:31,5,0	./.	1/1:6,6:12:3.01:46,3,0	0/1:18,0:18:9.59:10,0,336	0/0:20,0:20:30.10:0,30,536	0/0:10,0:10:15.05:0,15,313	0/1:15,0:15:31.98:32,0,44	0/1:16,0:16:13.66:21,0,14	0/0:14,0:14:15.05:0,15,235	0/0:17,0:17:21.07:0,21,369	0/0:15,0:15:24.08:0,24,478	0/0:21,0:21:33.11:0,33,696	1/1:15,0:14:3.01:46,3,0	1/1:9,10:19:27.04:325,27,0	./.	0/1:15,0:15:25.40:28,0,25	0/0:25,0:25:30.08:0,30,507	0/0:13,0:13:18.53:0,19,411	0/1:26,0:26:40.62:41,0,143	0/1:33,0:33:28.30:28,0,118	1/1:8,17:25:6.02:83,6,0	0/0:8,0:8:1.82:0,2,5
chr10	83420638	.	CT	C	147.84	PASS	AB=0.733;AC=2;AF=0.037;AN=54;BaseQRankSum=2.682;DP=399;FS=6.545;HRun=3;HaplotypeScore=104.3528;InbreedingCoeff=0.0974;MQ=50.91;MQ0=9;MQRankSum=-1.824;QD=5.69;ReadPosRankSum=-0.222;VQSLOD=0.0573;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:12,5:17:94.97:133,0,95	0/0:8,0:8:24.08:0,24,333	./.	0/0:5,0:1:1.25:0,1,3	0/0:20,0:20:53.99:0,54,638	0/0:14,0:14:42.14:0,42,593	0/1:5,4:9:39.32:103,0,39	0/0:20,0:18:54.17:0,54,726	0/0:9,0:9:9.92:0,10,125	0/0:18,0:17:44.87:0,45,588	0/0:15,0:15:42.14:0,42,596	0/0:7,0:7:21.07:0,21,298	0/0:14,0:14:34.91:0,35,429	0/0:9,0:9:21.17:0,21,259	0/0:11,0:11:30.07:0,30,374	0/0:13,0:13:39.13:0,39,551	0/0:15,0:15:39.13:0,39,552	0/0:19,0:19:51.17:0,51,721	0/0:12,0:9:24.96:0,25,317	0/0:15,0:15:37.54:0,38,315	0/0:6,0:5:9.03:0,9,125	0/0:12,0:12:34.16:0,34,396	0/0:20,0:19:57.19:0,57,806	0/0:13,0:13:34.36:0,34,470	0/0:31,0:31:92.56:0,93,1077	0/0:29,0:29:72.53:0,73,908	0/0:25,0:25:30.66:0,31,346	0/0:4,0:4:12.04:0,12,161
chr10	83420647	.	T	TTC	437.97	PASS	AB=0.967;AC=8;AF=0.143;AN=56;BaseQRankSum=6.841;DP=385;FS=0.000;HRun=0;HaplotypeScore=113.7013;InbreedingCoeff=-0.0925;MQ=50.42;MQ0=15;MQRankSum=-4.920;QD=3.81;ReadPosRankSum=-0.525;VQSLOD=2.1967;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,5:14:99:178,0,148	0/0:9,0:9:23.90:0,24,314	0/0:9,1:2:3.85:0,4,22	0/1:12,0:2:0:0,0,0	0/1:22,0:22:85.62:86,0,107	0/0:13,0:13:36.11:0,36,522	0/1:5,0:5:33.89:60,0,34	0/0:18,0:16:45.15:0,45,671	0/0:9,0:9:12.02:0,12,156	0/0:16,0:15:45.15:0,45,681	0/0:16,0:16:45.15:0,45,679	0/0:6,0:6:18.06:0,18,276	0/1:13,0:13:73:89,0,73	0/1:8,0:8:21.04:21,0,29	0/0:9,0:9:20.51:0,21,215	0/0:12,0:12:36.12:0,36,551	0/0:16,0:16:48.16:0,48,728	0/0:17,0:17:48.12:0,48,691	0/0:13,0:9:27.09:0,27,375	0/0:14,0:13:39.07:0,39,452	0/0:7,0:6:15.05:0,15,203	0/1:14,0:14:51:55,0,51	0/0:20,0:19:54.14:0,54,770	0/0:12,0:12:30.92:0,31,394	0/1:27,0:27:77.73:78,0,293	0/0:27,0:26:66.88:0,67,767	0/0:24,0:24:27.07:0,27,367	0/0:2,0:1:3.01:0,3,40
chr10	83420648	.	T	TC	1848.26	PASS	AB=0.754;AC=7;AF=0.125;AN=56;BaseQRankSum=6.350;DP=387;FS=2.457;HRun=0;HaplotypeScore=103.1075;InbreedingCoeff=-0.1234;MQ=50.17;MQ0=15;MQRankSum=-6.421;QD=18.12;ReadPosRankSum=0.368;VQSLOD=5.4586;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:89.49:89,0,167	0/0:9,0:9:24.06:0,24,302	0/0:11,0:2:2.97:0,3,20	0/0:11,2:2:1.55:0,2,4	0/1:11,11:22:94.73:488,0,95	0/0:13,0:13:36.11:0,36,485	0/1:5,0:5:18.91:19,0,36	0/0:18,0:16:45.15:0,45,628	0/0:11,0:11:11.95:0,12,142	0/0:16,0:15:45.15:0,45,619	0/0:16,0:16:45.15:0,45,626	0/0:6,0:6:18.06:0,18,252	0/1:7,6:13:57.80:316,0,58	0/1:4,4:8:20.70:146,0,21	0/0:9,0:9:21.04:0,21,249	0/0:13,0:13:36.12:0,36,503	0/0:16,0:16:48.16:0,48,670	0/0:17,0:17:48.12:0,48,646	0/0:12,0:9:27.07:0,27,357	0/0:14,0:13:38.94:0,39,386	0/0:7,0:6:18.01:0,18,216	0/1:5,9:14:58.40:276,0,58	0/0:20,0:19:54.17:0,54,725	0/0:12,0:12:31.29:0,31,383	0/1:12,14:26:99:642,0,240	0/0:26,0:25:66.16:0,66,651	0/0:24,0:24:26.99:0,27,333	0/0:2,0:1:3.01:0,3,32
chr10	83420652	.	T	TC	646.56	PASS	AB=0.956;AC=8;AF=0.143;AN=56;BaseQRankSum=7.715;DP=376;FS=6.525;HRun=0;HaplotypeScore=109.5197;InbreedingCoeff=0.0244;MQ=50.23;MQ0=15;MQRankSum=-6.540;QD=6.40;ReadPosRankSum=2.728;VQSLOD=3.3131;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:58.68:198,0,59	0/0:8,0:8:21.06:0,21,278	0/0:13,0:3:3.01:0,3,42	0/0:20,0:3:4.66:0,5,19	0/1:19,0:19:6.39:6,0,207	0/0:11,0:11:30.10:0,30,419	0/1:5,0:5:30.07:48,0,30	0/0:20,0:18:54.17:0,54,723	0/0:10,0:10:11.91:0,12,120	0/0:16,0:16:48.15:0,48,633	0/0:16,0:16:45.11:0,45,607	0/0:6,0:6:18.06:0,18,252	0/0:11,0:11:3.19:0,3,142	0/0:9,0:9:18.63:0,19,117	0/0:7,0:7:18.03:0,18,206	0/0:13,0:13:39.11:0,39,512	0/0:19,0:19:49.38:0,49,652	0/0:15,0:15:39.13:0,39,545	0/0:12,0:9:27.04:0,27,320	0/0:13,0:12:35.94:0,36,360	0/0:7,0:6:14.65:0,15,153	0/1:13,0:13:6.61:7,0,162	0/0:15,0:14:42.14:0,42,586	0/0:11,0:11:27.97:0,28,358	0/1:26,0:26:4.80:5,0,423	0/1:14,8:21:99:457,0,233	0/0:22,0:22:20.97:0,21,251	1/1:1,1:1:3.01:48,3,0
chr10	83420654	.	CT	C	405.46	PASS	AB=0.925;AC=7;AF=0.125;AN=56;BaseQRankSum=3.134;DP=375;FS=10.548;HRun=3;HaplotypeScore=104.6347;InbreedingCoeff=0.2344;MQ=49.51;MQ0=15;MQRankSum=-5.296;QD=4.66;ReadPosRankSum=2.603;VQSLOD=-0.2886;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,7:14:1.94:213,0,2	0/0:8,0:8:18.06:0,18,245	0/0:15,0:3:2.95:0,3,19	0/1:22,1:4:0.42:0,0,2	0/0:18,0:18:25.06:0,25,181	0/0:11,0:11:33.10:0,33,431	1/1:3,3:5:9.77:64,10,0	0/0:20,0:18:13.64:0,14,260	0/0:10,0:10:5.25:0,5,66	0/0:14,1:15:8.44:0,8,476	0/0:16,0:16:45.11:0,45,589	0/0:6,0:6:18.06:0,18,252	0/0:10,0:10:12.45:0,12,117	0/1:8,0:8:1.60:2,0,59	0/0:7,0:7:18.03:0,18,192	0/0:11,0:11:29.83:0,30,382	0/0:19,0:18:42.60:0,43,526	0/0:15,0:15:42.13:0,42,570	0/0:11,1:9:0:0,0,77	0/1:14,0:13:99:221,0,101	0/0:6,2:7:1.02:0,1,98	0/0:12,0:12:22.65:0,23,144	0/0:15,0:14:42.12:0,42,559	0/0:12,0:12:16.89:0,17,290	0/0:25,0:25:44.73:0,45,378	0/0:21,0:20:36.05:0,36,347	0/1:22,0:22:20.29:20,0,166	0/0:2,0:1:2.50:0,2,9
chr10	83420658	.	C	CT	580.55	PASS	AB=0.865;AC=14;AF=0.250;AN=56;BaseQRankSum=7.650;DP=362;FS=0.597;HRun=3;HaplotypeScore=96.7140;InbreedingCoeff=0.4684;MQ=52.55;MQ0=14;MQRankSum=-5.678;QD=6.52;ReadPosRankSum=-0.055;VQSLOD=0.3340;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:2.43:0,2,292	0/1:6,1:7:17.07:17,0,109	0/0:21,0:4:3.93:0,4,25	0/0:25,0:5:1.08:0,1,19	1/1:11,0:11:8.95:134,9,0	0/0:11,0:11:27.08:0,27,334	0/0:7,0:6:15:0,15,132	0/0:20,0:18:49.17:0,49,447	0/0:10,0:10:11.97:0,12,119	0/0:13,0:13:16.23:0,16,416	0/0:16,0:16:42.12:0,42,508	0/0:7,0:7:18.06:0,18,223	1/1:6,0:6:8.51:57,9,0	1/1:6,0:6:9.43:71,9,0	0/1:2,5:7:22.31:111,0,22	0/0:11,0:11:27.08:0,27,333	0/0:18,1:18:20.27:0,20,449	0/0:16,0:15:42.13:0,42,519	0/0:12,0:8:18.13:0,18,146	0/0:14,0:13:35.90:0,36,338	0/1:8,0:7:6.73:7,0,99	1/1:8,0:8:9.20:87,9,0	0/0:16,0:15:42.13:0,42,516	0/0:12,0:12:25.94:0,26,301	1/1:15,0:15:14.64:163,15,0	0/1:21,0:20:25.44:102,0,25	0/0:22,0:22:19.56:0,20,208	0/0:2,0:1:2.37:0,2,8
chr10	83420659	.	TTC	T	1486.44	PASS	AB=0.922;AC=16;AF=0.286;AN=56;BaseQRankSum=9.907;DP=359;FS=0.000;HRun=0;HaplotypeScore=96.4858;InbreedingCoeff=0.5846;MQ=52.21;MQ0=14;MQRankSum=-7.944;QD=12.28;ReadPosRankSum=0.686;VQSLOD=3.1127;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,1:17:3.69:0,4,541	0/0:6,0:6:3.37:0,3,194	0/0:23,0:4:10.11:0,10,82	0/1:28,0:5:5.23:19,0,5	1/1:4,7:11:25.95:274,26,0	0/0:10,0:10:30.10:0,30,528	0/0:7,0:6:15.04:0,15,196	0/0:20,0:18:42.10:0,42,688	0/0:10,0:10:12.01:0,12,193	0/0:12,1:13:16.23:0,16,580	0/0:16,0:16:42.14:0,42,710	0/0:7,0:7:21.07:0,21,357	1/1:3,3:6:14.83:162,15,0	1/1:2,4:6:17.87:195,18,0	0/1:6,0:6:44.29:44,0,76	0/0:10,0:10:26.92:0,27,453	0/1:19,0:18:0.20:0,0,666	0/0:16,0:15:42.14:0,42,751	0/0:12,0:8:12.02:0,12,181	0/0:14,0:13:35.92:0,36,427	0/0:8,0:7:4.97:0,5,164	1/1:3,5:8:20.53:223,21,0	0/0:15,0:14:42.14:0,42,716	0/0:12,0:12:26.69:0,27,474	1/1:6,9:15:41.54:426,42,0	0/1:11,9:19:19.20:315,0,19	0/0:22,0:22:19.58:0,20,306	1/1:2,0:1:2.22:7,2,0
chr10	83420664	.	CTTCTTCTTCTTT	C	3784.52	PASS	AB=0.956;AC=16;AF=0.286;AN=56;BaseQRankSum=10.451;DP=369;FS=2.481;HRun=0;HaplotypeScore=144.3124;InbreedingCoeff=0.7849;MQ=52.39;MQ0=16;MQRankSum=-8.589;QD=36.04;ReadPosRankSum=0.888;VQSLOD=3.4757;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:41.46:0,41,885	0/0:6,0:7:18.02:0,18,465	0/0:28,0:6:10.07:0,10,131	0/1:28,0:6:15.15:15,0,45	1/1:11,0:11:30.10:536,30,0	0/0:10,0:10:30.10:0,30,1133	0/0:7,0:6:15.05:0,15,295	0/0:21,0:19:51.12:0,51,1526	0/0:10,0:10:18.06:0,18,577	0/0:14,0:13:39.13:0,39,1400	0/0:14,0:14:39.11:0,39,1187	0/0:9,0:9:21.03:0,21,645	1/1:5,1:6:15.05:365,15,0	1/1:5,1:6:18.06:461,18,0	0/0:5,0:5:12.93:0,13,486	0/0:10,0:10:22.06:0,22,840	0/0:19,0:18:33.67:0,34,1305	0/0:16,0:15:39.13:0,39,1570	0/0:11,0:7:15.05:0,15,487	0/0:14,0:13:30.83:0,31,772	0/1:8,0:7:6.47:6,0,421	1/1:8,0:8:24.08:485,24,0	0/0:17,0:16:45.08:0,45,1608	0/0:12,0:12:27.09:0,27,941	1/1:12,3:15:45.15:904,45,0	1/1:16,2:17:46.25:968,46,0	0/0:21,0:21:21.07:0,21,738	1/1:2,0:1:3.01:44,3,0
chr10	83420665	.	TTC	T	1352.69	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=10.610;DP=376;FS=0.000;HRun=0;HaplotypeScore=97.8575;InbreedingCoeff=0.8111;MQ=51.81;MQ0=16;MQRankSum=-7.556;QD=13.66;ReadPosRankSum=1.912;VQSLOD=3.5881;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:40.29:0,40,642	0/0:7,0:7:14.54:0,15,234	0/0:30,0:6:3.34:0,3,83	0/1:33,0:6:3.18:3,0,40	1/1:4,7:11:27.03:273,27,0	0/0:10,0:10:30.10:0,30,533	0/0:7,0:6:15.05:0,15,260	0/0:22,0:20:54.18:0,54,913	0/0:10,0:10:18.05:0,18,272	0/0:15,0:14:42.09:0,42,656	0/0:15,0:15:39.13:0,39,679	0/0:10,0:10:18.06:0,18,323	1/1:3,3:6:13.28:150,13,0	1/1:2,4:6:17.91:196,18,0	0/0:5,0:5:12.93:0,13,232	0/0:9,0:9:20.90:0,21,381	0/0:19,0:18:39.08:0,39,729	0/0:15,0:14:39.13:0,39,722	0/0:12,0:8:15.04:0,15,236	0/0:15,0:14:27.96:0,28,383	0/0:8,0:7:6.82:0,7,203	1/1:3,5:8:19.11:203,19,0	0/0:17,0:16:42.14:0,42,723	0/0:12,0:12:27.09:0,27,496	1/1:6,9:15:40.23:383,40,0	1/1:10,8:17:4.92:319,5,0	0/0:21,0:21:21.06:0,21,349	1/1:2,0:1:1.25:3,1,0
chr10	83420669	.	TC	T	577.97	PASS	AB=0.909;AC=10;AF=0.179;AN=56;BaseQRankSum=10.532;DP=398;FS=0.000;HRun=1;HaplotypeScore=102.2293;InbreedingCoeff=0.5949;MQ=50.07;MQ0=20;MQRankSum=-7.613;QD=7.92;ReadPosRankSum=3.777;VQSLOD=0.9856;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:34.93:0,35,483	0/0:7,0:7:15.05:0,15,209	0/0:34,0:6:14.10:0,14,139	0/0:36,0:6:4.78:0,5,52	1/1:12,3:15:2.82:172,3,0	0/0:13,0:12:33.11:0,33,495	0/0:7,0:6:15.02:0,15,201	0/0:22,0:20:59.99:0,60,842	0/0:9,0:9:21:0,21,256	0/0:17,0:16:42.10:0,42,594	0/0:16,0:16:36.11:0,36,530	0/0:9,0:9:18.06:0,18,281	0/1:7,2:9:15.87:41,0,16	1/1:6,0:6:14.35:57,14,0	0/0:4,0:4:12.04:0,12,191	0/0:12,0:12:22.63:0,23,329	0/0:20,0:18:36.50:0,37,576	0/0:17,0:16:42.04:0,42,629	0/0:11,0:7:18.06:0,18,257	0/0:15,0:14:24.93:0,25,307	0/0:8,0:7:14.83:0,15,199	1/1:6,3:9:4.19:124,4,0	0/0:16,0:15:39.12:0,39,588	0/0:14,0:14:29.92:0,30,443	1/1:12,3:15:39.27:303,39,0	0/1:19,0:18:32.23:32,0,63	0/0:17,0:17:21.07:0,21,313	0/0:4,0:3:5.28:0,5,27
chr10	83420671	.	TTC	T	469.96	PASS	AB=0.969;AC=14;AF=0.250;AN=56;BaseQRankSum=10.043;DP=420;FS=0.000;HRun=0;HaplotypeScore=107.8673;InbreedingCoeff=0.5223;MQ=49.29;MQ0=22;MQRankSum=-7.376;QD=3.43;ReadPosRankSum=3.000;VQSLOD=1.9600;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:26.09:0,26,171	0/0:8,0:8:16.25:0,16,155	0/0:36,0:6:9.66:0,10,52	0/1:38,0:6:15.21:19,0,15	1/1:15,0:15:8.32:146,8,0	0/0:15,1:15:7.33:0,7,363	0/0:7,0:6:12.94:0,13,78	0/0:24,0:22:43.23:0,43,568	0/1:9,0:9:1.11:1,0,107	0/0:16,0:15:33.43:0,33,418	0/0:16,0:16:35.45:0,35,372	0/0:10,0:10:20.78:0,21,216	0/1:9,0:9:4.19:27,0,4	1/1:6,0:6:15.01:67,15,0	0/0:4,0:4:12.01:0,12,143	0/1:10,3:12:4.43:4,0,199	0/0:21,0:19:19.45:0,19,395	0/0:18,0:17:26.70:0,27,511	0/0:12,0:8:17.77:0,18,173	0/0:17,0:16:24.21:0,24,263	0/0:8,0:7:10.02:0,10,156	1/1:9,0:9:11.75:88,12,0	0/0:20,0:19:23.62:0,24,472	0/0:15,0:15:26.76:0,27,293	1/1:15,0:15:40.39:207,40,0	0/1:19,0:18:3.51:63,0,4	0/0:18,0:18:21.28:0,21,270	0/1:4,0:3:4.04:13,0,4
chr10	83420673	.	CT	C	743.42	PASS	AB=0.970;AC=19;AF=0.339;AN=56;BaseQRankSum=10.283;DP=475;FS=0.535;HRun=12;HaplotypeScore=117.1329;InbreedingCoeff=0.6719;MQ=49.20;MQ0=22;MQRankSum=-7.370;QD=5.90;ReadPosRankSum=4.280;VQSLOD=2.1934;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:2.37:53,0,2	0/1:9,1:9:8.01:8,0,96	0/0:36,0:6:2.93:0,3,35	0/0:41,0:7:9.10:0,9,55	1/1:4,11:15:25.69:141,26,0	0/0:17,0:16:32.25:0,32,294	1/1:7,0:6:1.81:5,2,0	0/0:30,0:28:46.65:0,47,437	0/0:15,0:15:3.74:0,4,175	0/0:17,0:16:31.08:0,31,306	0/1:17,0:16:1.81:2,0,158	0/0:15,0:15:20.78:0,21,165	1/1:5,4:9:0.37:82,0,0	1/1:2,4:6:16.33:86,16,0	0/0:7,0:7:13.56:0,14,113	0/0:18,0:17:27.41:0,27,210	0/0:26,0:24:33.30:0,33,265	0/0:27,0:26:45.05:0,45,361	0/0:13,0:10:18.02:0,18,174	0/0:18,0:17:29.60:0,30,282	0/0:8,0:7:14.36:0,14,114	1/1:3,6:9:15.28:91,15,0	0/0:20,1:20:25.40:0,25,294	0/0:18,0:18:20.89:0,21,183	1/1:6,9:15:20.03:132,20,0	1/1:6,11:16:43.95:280,44,0	0/0:22,0:22:23.92:0,24,214	1/1:4,0:3:5.97:46,6,0
chr10	83420675	.	T	TC	176.45	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=5.372;DP=477;FS=16.093;HRun=0;HaplotypeScore=120.8249;InbreedingCoeff=0.5226;MQ=49.00;MQ0=22;MQRankSum=-2.988;QD=2.42;ReadPosRankSum=0.175;VQSLOD=1.9248;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,2:14:15.69:205,16,0	0/0:10,0:9:4.21:0,4,177	0/0:37,0:6:13.65:0,14,81	0/1:43,0:7:0.14:0,0,40	0/0:15,0:15:20.36:0,20,97	0/0:18,0:17:42.75:0,43,513	1/1:3,2:4:7.20:54,7,0	0/0:30,0:28:65.65:0,66,713	0/0:15,0:15:35.30:0,35,330	0/0:21,0:20:41.39:0,41,472	0/0:16,0:15:36:0,36,388	0/0:15,0:15:38.77:0,39,358	0/0:9,0:9:19.20:0,19,97	0/0:6,0:6:16.92:0,17,84	0/1:7,0:7:34.80:35,0,79	0/0:18,0:17:26.08:0,26,341	0/0:26,0:24:56.94:0,57,522	0/0:25,0:24:52.76:0,53,602	0/0:15,0:12:26.36:0,26,270	0/0:19,0:18:50.87:0,51,512	0/0:8,0:7:18.01:0,18,208	0/0:9,0:9:22.86:0,23,129	0/0:21,0:20:50.91:0,51,574	0/0:18,0:18:38.64:0,39,371	0/0:15,0:15:38.64:0,39,207	0/0:17,0:16:20.32:0,20,139	0/0:21,0:21:23.26:0,23,315	0/1:4,0:3:3.05:3,0,11
chr10	83420691	.	T	TG	2095.06	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.991;DP=505;FS=18.240;HRun=0;HaplotypeScore=99.1430;InbreedingCoeff=0.9272;MQ=46.81;MQ0=20;MQRankSum=-4.778;QD=22.53;ReadPosRankSum=5.833;VQSLOD=3.2944;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:26.56:0,27,135	0/0:8,0:7:19.89:0,20,148	0/0:41,0:7:13.79:0,14,106	0/0:47,0:9:2.03:0,2,42	1/1:1,17:18:47.77:418,48,0	0/0:16,0:15:44.82:0,45,517	0/0:3,0:2:5.22:0,5,32	0/0:29,0:28:69.09:0,69,727	0/0:17,0:17:41.60:0,42,404	0/0:25,0:24:67.19:0,67,733	0/0:15,0:14:38.61:0,39,369	0/0:15,0:15:32.93:0,33,331	1/1:2,7:9:27.05:276,27,0	1/1:4,5:9:16.20:238,16,0	0/0:8,0:8:23.94:0,24,254	0/0:16,0:15:37.85:0,38,346	0/0:30,0:28:61.76:0,62,621	0/0:26,0:25:62.47:0,62,658	0/0:16,0:12:27.54:0,28,259	0/0:19,0:19:56.89:0,57,589	0/0:10,0:9:17.73:0,18,168	1/1:1,6:7:21.01:190,21,0	0/0:22,0:21:59.91:0,60,646	0/0:17,0:17:30.30:0,30,385	1/1:1,19:20:38.92:382,39,0	1/1:8,15:23:62.79:656,63,0	0/0:18,0:18:37.71:0,38,354	1/1:6,1:6:12.02:129,12,0
chr10	83421281	.	A	AC	4416.48	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.274;DP=513;FS=5.000;HRun=1;HaplotypeScore=87.2197;InbreedingCoeff=0.9859;MQ=80.62;MQ0=0;MQRankSum=-9.648;QD=39.79;ReadPosRankSum=0.623;VQSLOD=5.2903;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:72.23:0,72,931	0/0:4,0:4:9.03:0,9,117	0/0:24,0:24:66.20:0,66,834	0/0:20,0:19:45.18:0,45,681	1/1:2,21:24:63.20:922,63,0	0/0:22,0:22:66.21:0,66,847	0/0:21,0:21:63.20:0,63,818	0/0:19,0:19:51.12:0,51,620	0/0:15,0:15:45.13:0,45,568	0/0:25,0:24:72.23:0,72,923	0/0:14,0:14:42.14:0,42,544	0/0:21,0:21:63.20:0,63,817	1/1:1,16:17:48.16:718,48,0	1/1:3,11:14:33.11:493,33,0	0/0:22,0:22:63.20:0,63,818	0/0:13,0:13:39.13:0,39,503	0/0:33,0:33:93.30:0,93,1207	0/0:9,0:9:24.08:0,24,310	0/0:22,0:22:66.19:0,66,817	0/0:12,0:12:33.11:0,33,426	0/0:22,0:22:66.21:0,66,856	1/1:1,11:12:36.12:537,36,0	0/0:15,0:15:39.13:0,39,506	0/0:22,0:22:66.21:0,66,857	1/1:1,13:14:42.14:627,42,0	1/1:4,20:24:27.25:895,27,0	0/0:18,0:18:54.18:0,54,701	1/1:0,6:6:15.05:225,15,0
chr10	83421308	.	GT	G	2723	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.424;DP=562;FS=4.100;HRun=10;HaplotypeScore=102.0894;InbreedingCoeff=0.9215;MQ=75.41;MQ0=5;MQRankSum=-7.343;QD=19.04;ReadPosRankSum=1.937;VQSLOD=3.9851;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:59.99:521,60,0	0/0:6,0:6:15.04:0,15,166	0/0:36,0:20:2.45:0,2,138	0/0:37,0:30:17.92:0,18,365	1/1:3,16:20:41:342,41,0	0/0:19,0:19:51.12:0,51,549	1/1:1,22:23:65.98:573,66,0	0/0:23,0:23:57.15:0,57,630	0/0:17,0:17:45.07:0,45,476	0/0:24,0:23:37.12:0,37,630	0/0:18,0:18:42.11:0,42,457	0/0:27,0:27:74.87:0,75,807	1/1:2,13:15:41.97:361,42,0	1/1:1,10:11:29.99:260,30,0	0/0:18,0:18:51.14:0,51,564	0/0:16,0:16:39.11:0,39,431	0/0:37,0:37:98.72:0,99,1052	0/0:10,1:11:4.01:0,4,263	0/0:29,0:29:52.13:0,52,784	0/0:13,0:13:33.09:0,33,363	0/0:19,1:20:25.08:0,25,504	1/1:5,8:13:23.96:204,24,0	0/0:14,0:15:41.95:0,42,446	0/0:28,0:29:87.05:0,87,933	1/1:1,11:12:32.98:286,33,0	1/1:5,13:18:5.80:279,6,0	0/0:21,1:22:31.10:0,31,570	1/1:0,4:4:12:104,12,0
chr10	83421344	.	CG	C	2909.99	PASS	AB=0.835;AC=15;AF=0.268;AN=56;BaseQRankSum=10.132;DP=556;FS=27.086;HRun=1;HaplotypeScore=93.7334;InbreedingCoeff=0.6953;MQ=68.21;MQ0=1;MQRankSum=-3.652;QD=19.14;ReadPosRankSum=-1.790;VQSLOD=2.0753;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:9.13:9,0,191	0/0:7,0:7:18.06:0,18,274	0/0:26,0:19:34.70:0,35,589	0/1:27,1:19:14.90:15,0,263	1/1:0,13:13:12.04:167,12,0	0/0:18,0:18:53.91:0,54,724	0/0:24,0:24:26.63:0,27,179	0/0:25,0:25:71.40:0,71,1011	0/0:11,0:11:33.11:0,33,491	0/0:24,0:24:72.16:0,72,1007	0/0:21,0:21:63.20:0,63,938	0/0:23,0:23:66.01:0,66,966	1/1:0,13:13:36.12:501,36,0	1/1:0,16:16:48.16:668,48,0	0/0:16,0:16:48.15:0,48,710	0/0:15,0:15:45.15:0,45,685	0/0:36,0:36:99:0,105,1550	0/0:17,0:17:51:0,51,719	0/0:22,0:22:66.04:0,66,884	0/0:19,0:19:57.09:0,57,792	0/0:22,0:22:66.01:0,66,974	1/1:0,20:20:48.12:647,48,0	0/0:14,0:14:36.10:0,36,527	0/0:41,0:41:99:0,120,1758	1/1:0,11:11:30.10:418,30,0	0/1:3,18:21:77.19:629,0,77	0/0:22,0:21:66.20:0,66,949	1/1:0,1:1:3.01:42,3,0
chr10	83421522	.	A	AAAAC	1008.15	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-2.669;DP=570;FS=0.000;HRun=0;HaplotypeScore=103.5591;InbreedingCoeff=0.6296;MQ=62.45;MQ0=3;MQRankSum=-0.849;QD=22.40;ReadPosRankSum=-0.704;VQSLOD=3.2284;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:16:16.15:16,0,92	0/0:11,0:11:18.05:0,18,248	0/0:25,0:14:15.02:0,15,180	0/0:23,0:13:8.86:0,9,97	0/0:27,0:27:51.17:0,51,819	0/0:22,0:22:45.14:0,45,701	0/0:2,0:8:18.02:0,18,166	0/0:19,0:19:24.08:0,24,384	0/0:24,0:24:51.17:0,51,800	0/0:31,0:31:69.23:0,69,1087	0/0:15,0:15:33.09:0,33,506	0/0:22,0:22:13.23:0,13,663	0/0:15,0:15:30.09:0,30,441	0/0:14,0:14:39.10:0,39,596	0/0:22,0:22:48.16:0,48,773	0/0:21,0:21:48.16:0,48,772	0/0:41,0:41:70.08:0,70,1300	0/0:31,0:31:53.93:0,54,786	0/0:19,0:19:20.99:0,21,285	0/0:14,0:14:36.10:0,36,533	0/0:13,0:13:27.08:0,27,408	0/0:13,0:13:39.12:0,39,585	0/0:19,0:19:33.10:0,33,504	0/0:15,0:15:36.06:0,36,506	0/0:26,0:26:63.20:0,63,974	1/1:9,17:25:5.71:958,6,0	0/0:35,0:35:72.23:0,72,1137	1/1:0,3:3:6.02:144,6,0
chr10	83421557	.	CA	C	614.91	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.560;DP=658;FS=5.152;HRun=6;HaplotypeScore=72.6042;InbreedingCoeff=0.9664;MQ=62.04;MQ0=9;MQRankSum=-2.908;QD=19.22;ReadPosRankSum=-1.348;VQSLOD=3.0074;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:18:35.88:385,36,0	0/0:7,0:7:21.07:0,21,276	0/0:64,0:23:33.26:0,33,383	0/0:62,1:15:23.84:0,24,306	0/0:25,0:25:72.22:0,72,919	0/0:28,0:27:75.22:0,75,955	1/1:1,13:14:33.08:352,33,0	0/0:22,0:21:51.11:0,51,612	0/0:29,0:29:84.25:0,84,1077	0/0:29,0:29:84.17:0,84,1027	0/0:14,0:14:39.10:0,39,484	0/0:24,0:24:63.16:0,63,772	0/0:10,0:10:30.06:0,30,359	0/0:16,0:16:45.08:0,45,547	0/0:22,0:22:60.18:0,60,774	0/0:20,0:20:60.18:0,60,775	0/0:41,0:41:99:0,114,1497	0/0:32,0:32:86.47:0,86,1035	0/0:12,0:12:29.69:0,30,369	0/0:20,0:20:51.17:0,51,671	0/0:13,0:13:39.13:0,39,513	0/0:13,0:13:33.11:0,33,431	0/0:18,0:18:51.14:0,51,651	0/0:19,0:19:48.13:0,48,613	0/0:28,0:28:78.24:0,78,1009	0/0:21,0:20:57.17:0,57,723	0/0:31,0:31:84.26:0,84,1088	0/0:4,0:4:8.97:0,9,85
chr10	83422290	.	AG	A	4504.10	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.534;DP=650;FS=4.732;HRun=1;HaplotypeScore=66.3084;InbreedingCoeff=0.9982;MQ=85.47;MQ0=0;MQRankSum=-4.558;QD=35.47;ReadPosRankSum=2.258;VQSLOD=5.0429;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:65:99:0,195,3012	0/0:16,0:16:48.12:0,48,711	0/0:24,0:23:68.91:0,69,903	0/0:23,0:22:62.65:0,63,801	1/1:0,17:17:51.08:677,51,0	0/0:15,0:15:45.12:0,45,671	0/0:21,0:21:63.18:0,63,973	0/0:27,0:27:81.24:0,81,1186	0/0:18,0:18:54.17:0,54,834	0/0:25,0:25:75.23:0,75,1129	0/0:9,0:9:27.09:0,27,429	0/0:28,0:28:84.23:0,84,1246	1/1:0,14:14:30.10:419,30,0	1/1:0,14:14:36.12:499,36,0	0/0:24,0:24:72.21:0,72,1116	0/0:18,0:18:51.17:0,51,811	0/0:39,0:39:99:0,117,1795	0/0:22,0:22:66.20:0,66,1028	0/0:24,0:24:72.16:0,72,1022	0/0:20,0:20:60.16:0,60,887	0/0:43,0:43:99:0,129,1927	1/1:2,26:28:69.14:933,69,0	0/0:14,0:14:42.13:0,42,640	0/0:24,0:24:72.25:0,72,1147	1/1:0,23:23:60.20:833,60,0	1/1:1,22:23:21.26:851,21,0	0/0:24,0:24:72.22:0,72,1123	1/1:0,8:8:21.07:293,21,0
chr10	83424458	.	TTGTG	T	936.07	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.503;DP=767;FS=1.672;HRun=0;HaplotypeScore=136.4561;InbreedingCoeff=0.7518;MQ=62.94;MQ0=9;MQRankSum=0.140;QD=12.65;ReadPosRankSum=0.073;VQSLOD=3.0999;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,28:54:44.49:796,44,0	0/0:6,0:9:11.40:0,11,229	0/0:53,0:27:3.01:0,3,49	0/0:70,0:34:19.33:0,19,192	0/0:14,0:14:6.02:0,6,87	0/0:22,0:21:33.10:0,33,684	1/1:9,8:19:20.98:259,21,0	0/0:28,0:27:26.76:0,27,477	0/0:22,0:22:44.91:0,45,885	0/0:35,0:35:51.13:0,51,1052	0/0:20,0:18:26.83:0,27,563	0/0:20,0:21:53.92:0,54,1178	0/0:12,0:25:21.07:0,21,374	0/0:15,0:26:3.01:0,3,52	0/0:21,0:22:29.84:0,30,600	0/0:17,0:19:50.64:0,51,1057	0/0:36,0:37:71.91:0,72,1457	0/0:27,0:30:48.61:0,49,964	0/0:23,0:23:35.86:0,36,740	0/0:19,0:19:27.09:0,27,599	0/0:39,0:42:62.65:0,63,1198	0/0:32,0:31:11.50:0,12,179	0/0:21,0:21:42.11:0,42,870	0/0:30,0:33:68.94:0,69,1515	0/0:15,0:15:8.63:0,9,138	0/0:24,0:25:29.84:0,30,610	0/0:14,0:14:30.08:0,30,647	0/0:14,0:14:29.84:0,30,559
chr10	83425688	.	A	AT	1421.28	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-10.131;DP=545;FS=1.769;HRun=10;HaplotypeScore=55.4517;InbreedingCoeff=0.9718;MQ=78.22;MQ0=0;MQRankSum=-0.440;QD=20.90;ReadPosRankSum=0.840;VQSLOD=4.5710;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:30:25.82:629,26,0	0/0:11,0:12:28.99:0,29,224	0/0:19,0:19:29.57:0,30,209	0/0:11,0:11:8.86:0,9,166	0/0:30,0:31:79.90:0,80,643	0/0:26,0:27:67.94:0,68,548	1/1:0,14:14:39.10:416,39,0	0/0:40,1:42:65.87:0,66,737	0/0:19,0:19:44.90:0,45,369	0/0:33,0:33:77.89:0,78,640	0/0:17,0:17:41.92:0,42,345	0/0:8,0:9:14.01:0,14,104	0/0:16,0:16:47.95:0,48,394	0/0:12,0:12:26.95:0,27,222	0/0:18,0:18:19.15:0,19,362	0/0:15,0:15:29.95:0,30,246	0/0:15,0:17:49.02:0,49,381	0/0:15,0:15:35.95:0,36,295	0/0:20,0:22:45.97:0,46,351	0/0:21,0:21:59.92:0,60,490	0/0:23,0:24:52.94:0,53,425	0/0:19,0:19:23.78:0,24,345	0/0:15,0:15:35.95:0,36,296	0/0:18,0:20:40.01:0,40,307	0/0:12,0:13:25.99:0,26,203	1/1:2,11:13:33.07:344,33,0	0/0:28,0:28:71.90:0,72,591	1/1:5,6:11:18.05:192,18,0
chr10	83426333	.	ATT	A	3209.97	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=3.101;DP=506;FS=12.757;HRun=12;HaplotypeScore=73.9168;InbreedingCoeff=0.9524;MQ=67.47;MQ0=2;MQRankSum=-0.892;QD=22.14;ReadPosRankSum=1.353;VQSLOD=1.7988;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:60.11:603,60,0	0/0:10,0:10:27.09:0,27,400	0/0:5,0:5:9.03:0,9,132	0/0:9,0:8:6.05:0,6,89	0/0:34,0:39:99:0,99,1324	0/0:14,0:16:44.63:0,45,618	1/1:2,9:11:27.05:275,27,0	1/1:12,24:37:74.86:744,75,0	0/0:9,0:9:27.09:0,27,400	0/0:24,0:25:59.68:0,60,840	0/0:11,0:12:32.58:0,33,416	0/0:18,0:19:45.14:0,45,648	0/0:15,0:15:39.08:0,39,537	0/0:8,0:10:23.01:0,23,228	0/0:16,1:17:14.60:0,15,539	0/0:15,0:15:42.11:0,42,567	0/0:25,0:26:59.65:0,60,800	0/0:17,0:17:45.14:0,45,652	1/1:2,17:19:51.08:504,51,0	1/1:3,23:26:60.07:610,60,0	1/1:3,9:12:24.05:244,24,0	0/0:22,0:22:66.18:0,66,907	0/0:12,0:15:40.47:0,40,516	0/0:14,0:14:30.07:0,30,422	0/0:23,0:24:68.72:0,69,991	0/0:6,0:32:45.75:0,46,278	1/1:1,17:18:42.09:427,42,0	0/0:5,0:8:7.49:0,7,26
chr10	83426372	.	TA	T	1041.39	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=4.904;DP=455;FS=1.312;HRun=2;HaplotypeScore=64.9224;InbreedingCoeff=0.6253;MQ=64.80;MQ0=1;MQRankSum=-3.283;QD=17.36;ReadPosRankSum=-0.011;VQSLOD=3.6062;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:27:57.51:0,58,931	0/0:8,0:8:24.08:0,24,345	0/0:11,0:9:20.35:0,20,344	0/0:12,0:11:21.28:0,21,266	0/0:27,0:27:21.75:0,22,244	0/0:17,0:17:51.15:0,51,707	0/0:11,0:11:33.11:0,33,482	0/0:30,0:30:84.22:0,84,1091	0/0:11,0:11:33.08:0,33,443	0/0:24,0:24:68.88:0,69,928	0/0:17,0:17:51.14:0,51,706	0/0:11,0:11:32.89:0,33,431	0/0:14,0:14:38.54:0,39,177	0/1:9,0:9:9.72:10,0,56	0/0:16,0:16:48.13:0,48,663	0/0:14,0:14:42.13:0,42,595	0/0:21,0:21:63.07:0,63,847	0/0:14,0:14:42.12:0,42,592	0/0:15,0:15:42.13:0,42,597	0/0:26,0:26:75.23:0,75,1059	0/0:5,0:5:15.05:0,15,219	0/0:20,0:20:54.45:0,54,241	0/0:16,0:16:48.10:0,48,608	0/0:9,0:9:27.07:0,27,373	0/1:19,0:19:19.86:20,0,127	1/1:1,26:27:37.42:950,37,0	0/0:19,0:19:57.18:0,57,812	1/1:0,5:5:15.05:194,15,0
chr10	83426635	.	A	AC	4069.24	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-8.054;DP=618;FS=1.301;HRun=3;HaplotypeScore=60.7425;InbreedingCoeff=0.9950;MQ=81.30;MQ0=0;MQRankSum=-3.684;QD=39.13;ReadPosRankSum=2.643;VQSLOD=3.7602;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.24:0,93,1088	0/0:7,0:7:21.06:0,21,252	0/0:28,0:27:56.94:0,57,755	0/0:21,0:21:53.51:0,54,562	1/1:1,25:26:69.23:963,69,0	0/0:17,0:17:48.13:0,48,565	0/0:32,0:32:90.27:0,90,1080	0/0:25,0:25:72.22:0,72,863	0/0:19,0:19:57.17:0,57,684	0/0:25,0:25:69.21:0,69,827	0/0:11,0:11:30.09:0,30,360	0/0:19,0:19:54.17:0,54,648	1/1:0,20:20:57.19:798,57,0	1/1:0,17:17:45.15:629,45,0	0/0:29,0:29:87.27:0,87,1043	0/0:10,0:10:27.08:0,27,323	0/0:29,0:28:78.21:0,78,922	0/0:36,0:36:99:0,105,1259	0/0:30,0:30:75.20:0,75,873	0/0:15,0:15:42.12:0,42,491	0/0:36,0:36:93.97:0,94,1148	1/1:0,25:25:72.24:1008,72,0	0/0:20,0:20:57.17:0,57,682	0/0:14,0:14:39.12:0,39,468	1/1:0,16:15:48.16:671,48,0	0/0:29,0:29:78.23:0,78,924	0/0:23,0:23:69.14:0,69,787	0/0:5,0:5:15.05:0,15,180
chr10	83427232	.	GA	G	2868.86	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.221;DP=597;FS=6.828;HRun=5;HaplotypeScore=75.4742;InbreedingCoeff=0.9988;MQ=85.05;MQ0=0;MQRankSum=-1.498;QD=28.13;ReadPosRankSum=-0.144;VQSLOD=3.7169;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.26:0,81,1089	0/0:8,0:8:21.07:0,21,287	0/0:26,0:26:57.19:0,57,773	0/0:27,0:27:53.26:0,53,696	0/0:37,0:37:99:0,105,1403	0/0:16,0:16:48.16:0,48,656	0/0:29,0:29:87.25:0,87,1168	1/1:2,27:29:81.19:883,81,0	0/0:20,0:20:57.17:0,57,751	0/0:31,0:31:90.30:0,90,1231	0/0:22,0:22:63.20:0,63,847	0/0:24,0:24:66.21:0,66,886	0/0:11,0:11:30.09:0,30,394	0/0:17,0:17:48.12:0,48,631	0/0:22,0:22:66.21:0,66,887	0/0:19,0:19:57.19:0,57,780	0/0:27,0:27:75.25:0,75,1026	0/0:19,0:19:54.18:0,54,735	1/1:2,11:13:33.08:359,33,0	1/1:1,23:24:69.19:767,69,0	1/1:0,20:20:54.15:601,54,0	0/0:17,0:17:51.17:0,51,697	0/0:23,0:23:66.17:0,66,866	0/0:26,0:26:78.25:0,78,1052	0/0:11,0:11:33.11:0,33,451	0/0:20,0:20:57.15:0,57,729	1/1:1,15:16:39.10:434,39,0	0/0:15,0:15:45.15:0,45,615
chr10	83427598	.	TAATA	T	1586.55	PASS	AB=0.919;AC=28;AF=0.778;AN=36;BaseQRankSum=3.138;DP=279;FS=0.000;HRun=0;HaplotypeScore=45.6330;InbreedingCoeff=0.3934;MQ=50.13;MQ0=14;MQRankSum=-1.476;QD=8.81;ReadPosRankSum=-1.178;VQSLOD=1.6591;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:12:38.13:46,0,38	./.	./.	./.	1/1:9,1:10:3.01:47,3,0	1/1:2,4:5:12.04:188,12,0	./.	0/1:34,0:20:0:0,0,0	./.	./.	1/1:7,3:9:3.01:47,3,0	1/1:7,2:9:3.01:47,3,0	0/0:7,0:7:3.01:0,3,71	0/0:8,0:8:12.04:0,12,260	./.	./.	1/1:11,10:21:30.10:469,30,0	1/1:10,9:17:18.06:282,18,0	./.	1/1:3,0:5:6.01:56,6,0	1/1:3,0:4:3:28,3,0	./.	1/1:2,4:6:12.04:188,12,0	1/1:2,2:4:3.01:47,3,0	0/0:14,0:14:12.04:0,12,284	1/1:3,2:5:6.02:94,6,0	1/1:16,0:17:3:28,3,0	1/1:5,6:11:9.03:141,9,0
chr10	83428429	.	TC	T	835.22	PASS	AB=0.870;AC=12;AF=0.240;AN=50;BaseQRankSum=2.349;DP=374;FS=3.177;HRun=2;HaplotypeScore=58.1229;InbreedingCoeff=0.1405;MQ=37.76;MQ0=53;MQRankSum=-5.318;QD=5.22;ReadPosRankSum=-2.294;VQSLOD=-0.0624;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:14,4:11:11.43:28,0,11	0/0:8,0:7:11.25:0,11,128	./.	./.	0/1:9,3:8:30.98:31,0,34	0/0:14,0:10:24.07:0,24,306	0/1:18,2:16:18.18:18,0,24	0/1:25,6:26:99:214,0,255	0/0:10,0:8:14.47:0,14,167	0/0:10,0:7:21.02:0,21,257	0/0:12,0:10:27.02:0,27,334	0/0:10,0:8:18.06:0,18,238	0/0:4,2:5:2.90:0,3,27	1/1:5,4:8:10.02:110,10,0	0/0:10,0:10:24.08:0,24,321	0/0:13,0:12:26.28:0,26,312	0/0:18,0:12:27.49:0,27,344	0/0:20,0:18:26.75:0,27,634	0/1:14,3:14:99:116,0,134	0/0:9,4:12:5.85:0,6,72	./.	0/1:12,1:8:0:0,0,0	0/0:10,0:9:18.06:0,18,243	0/0:25,0:20:28.34:0,28,479	0/0:7,9:12:1.93:0,2,6	0/1:7,2:7:62.88:90,0,63	1/1:5,14:15:24.55:301,25,0	0/1:12,0:10:73.86:74,0,164
chr10	83428430	.	C	CT	927.74	PASS	AB=0.923;AC=12;AF=0.240;AN=50;BaseQRankSum=4.003;DP=369;FS=0.664;HRun=1;HaplotypeScore=56.2450;InbreedingCoeff=0.1419;MQ=37.91;MQ0=55;MQRankSum=-5.035;QD=6.18;ReadPosRankSum=-1.501;VQSLOD=-0.1201;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:10:11.08:27,0,11	0/0:5,0:7:11.25:0,11,128	./.	./.	0/1:10,2:8:30.77:31,0,33	0/0:14,0:10:24.07:0,24,304	0/1:19,0:15:18.45:18,0,24	0/1:27,0:22:99:217,0,254	0/0:10,0:8:14.96:0,15,179	0/0:10,0:7:21.06:0,21,264	0/0:12,0:10:27.09:0,27,351	0/0:10,0:8:18.06:0,18,238	0/0:6,0:5:2.90:0,3,27	1/1:8,1:8:10.33:111,10,0	0/0:10,0:10:23.94:0,24,315	0/0:13,0:12:26.28:0,26,310	0/0:18,0:12:30.06:0,30,370	0/0:20,0:18:26.75:0,27,620	0/1:14,0:11:99:119,0,116	0/0:14,0:13:5.46:0,5,73	./.	0/1:13,1:8:0:0,0,0	0/0:10,0:9:18.06:0,18,240	0/0:28,0:22:29.10:0,29,505	0/0:16,0:12:1.72:0,2,5	0/1:6,3:7:57.36:148,0,57	1/1:15,4:14:24.55:311,25,0	0/1:9,2:9:92.11:92,0,165
chr10	83428617	.	T	TG	329.04	PASS	AB=0.967;AC=17;AF=0.370;AN=46;BaseQRankSum=0.217;DP=133;FS=7.698;HRun=10;HaplotypeScore=24.2069;InbreedingCoeff=0.4543;MQ=81.54;MQ0=0;MQRankSum=-0.844;QD=6.45;ReadPosRankSum=-0.470;VQSLOD=-0.2148;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:1,0:1:3:0,3,25	0/0:10,0:9:17.79:0,18,129	0/0:3,0:2:1.82:0,2,5	1/1:1,2:3:3:28,3,0	./.	./.	1/1:5,2:7:6.02:64,6,0	0/0:5,0:5:5.98:0,6,49	0/0:4,0:4:5.99:0,6,49	0/1:4,0:4:0:0,0,0	0/0:7,0:7:11.94:0,12,95	1/1:2,2:4:3.01:32,3,0	./.	0/0:11,0:11:11.96:0,12,99	0/0:4,0:4:8.98:0,9,74	0/1:5,0:5:14.65:15,0,19	0/0:9,0:9:14.94:0,15,123	0/0:1,0:1:3:0,3,25	1/1:1,4:5:9.02:96,9,0	1/1:2,0:3:2.84:14,3,0	1/1:2,8:10:17.84:172,18,0	0/0:13,0:13:29.91:0,30,240	0/0:8,0:8:14.98:0,15,123	0/1:4,1:5:12.99:47,0,13	0/1:4,0:4:0:0,0,0	./.	0/1:1,0:1:0:0,0,0
chr10	83429507	.	T	TTAGA	1785.47	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.783;DP=670;FS=6.322;HRun=0;HaplotypeScore=113.0461;InbreedingCoeff=0.9900;MQ=69.91;MQ0=0;MQRankSum=-0.298;QD=34.34;ReadPosRankSum=1.598;VQSLOD=3.6388;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,27:39:63.22:1533,63,0	0/0:19,0:19:45.13:0,45,693	0/0:20,0:20:28.07:0,28,467	0/0:26,0:26:45.10:0,45,678	0/0:26,0:26:66.20:0,66,1049	0/0:18,0:18:48.16:0,48,775	1/1:5,5:13:15.05:371,15,0	0/0:35,0:35:45.14:0,45,707	0/0:18,0:18:51.15:0,51,799	0/0:23,0:23:60.18:0,60,934	0/0:21,0:21:45.14:0,45,727	0/0:26,0:26:63.19:0,63,1003	0/0:29,0:29:63.11:0,63,974	0/0:17,0:17:45.15:0,45,752	0/0:21,0:21:51.15:0,51,799	0/0:28,0:28:69.22:0,69,1101	0/0:24,0:24:69.16:0,69,1072	0/0:13,0:13:33.06:0,33,487	0/0:19,0:19:24.07:0,24,376	0/0:43,0:43:96.30:0,96,1582	0/0:18,0:18:39.13:0,39,649	0/0:24,0:24:57.19:0,57,916	0/0:28,0:28:69.21:0,69,1096	0/0:25,0:25:54.15:0,54,830	0/0:27,0:27:54.18:0,54,881	0/0:38,0:38:96.29:0,96,1512	0/0:17,0:17:36.11:0,36,579	0/0:15,0:15:36.12:0,36,580
chr10	83429832	.	A	AGTGTGG	17774.98	PASS	AB=0.782;AC=26;AF=0.464;AN=56;BaseQRankSum=4.840;DP=976;FS=146.349;HRun=0;HaplotypeScore=194.9062;InbreedingCoeff=-0.8667;MQ=83.24;MQ0=1;MQRankSum=-17.248;QD=18.81;ReadPosRankSum=-1.975;VQSLOD=1.5800;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:50,14:73:99:1517,0,2934	0/0:15,0:15:42.08:0,42,864	0/1:42,6:49:99:560,0,2075	0/1:28,7:35:99:755,0,1163	0/1:25,3:28:35.37:35,0,1471	0/1:12,5:19:99:487,0,764	0/1:21,5:29:99:546,0,1317	0/1:37,11:61:99:2093,0,1644	0/1:38,8:51:99:717,0,2321	0/1:27,2:31:99:188,0,1507	0/1:13,7:21:99:674,0,739	0/1:31,9:42:99:593,0,1909	0/1:32,7:40:99:645,0,1864	0/1:20,10:35:99:757,0,1358	0/1:22,6:32:99:550,0,1364	0/1:30,8:42:99:649,0,1892	0/1:37,5:43:99:529,0,2163	0/1:13,7:24:99:610,0,757	0/1:14,6:25:99:885,0,686	0/1:15,13:29:99:1035,0,816	0/1:44,9:56:99:893,0,2301	0/1:15,6:23:99:507,0,859	0/1:13,1:15:68.45:68,0,779	0/1:16,6:24:99:483,0,884	0/1:23,4:32:99:343,0,1480	0/1:26,7:33:99:489,0,1504	0/1:31,16:51:99:1165,0,1867	0/0:16,0:16:39.13:0,39,937
chr10	83430111	.	AGGTTACACTCTTTTGT	A	35460.71	PASS	AB=0.749;AC=28;AF=0.500;AN=56;BaseQRankSum=23.611;DP=1096;FS=5.311;HRun=0;HaplotypeScore=515.7506;InbreedingCoeff=-1.0000;MQ=81.14;MQ0=0;MQRankSum=-21.213;QD=32.35;ReadPosRankSum=5.378;VQSLOD=1.4174;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:35,9:44:99:727,0,7102	0/1:7,7:14:99:811,0,879	0/1:40,3:43:99:383,0,4364	0/1:38,7:45:99:923,0,3904	0/1:25,17:42:99:1288,0,5162	0/1:32,24:56:99:2516,0,6281	0/1:28,7:35:99:470,0,5868	0/1:32,12:44:99:274,0,4539	0/1:25,20:45:99:1718,0,5551	0/1:32,18:50:99:1824,0,6778	0/1:24,10:34:99:760,0,4497	0/1:20,21:41:99:2419,0,4420	0/1:18,16:34:99:1723,0,3188	0/1:14,18:32:99:1600,0,2591	0/1:21,22:43:99:2538,0,4054	0/1:16,16:32:99:1742,0,3587	0/1:20,8:28:99:491,0,4241	0/1:12,7:19:99:653,0,2663	0/1:30,3:33:98.51:99,0,4736	0/1:28,25:53:99:2109,0,5200	0/1:33,16:49:99:936,0,6664	0/1:27,9:36:99:756,0,4438	0/1:34,18:52:99:1539,0,6288	0/1:27,7:34:99:470,0,5621	0/1:16,14:30:99:1329,0,3145	0/1:27,29:56:99:3297,0,5346	0/1:22,18:40:99:1871,0,3914	0/1:27,5:32:99:194,0,5429
chr10	83430516	.	TAC	T	967.74	PASS	AB=0.977;AC=20;AF=0.385;AN=52;BaseQRankSum=0.080;DP=1207;FS=1.822;HRun=0;HaplotypeScore=325.7361;InbreedingCoeff=-0.0868;MQ=53.05;MQ0=12;MQRankSum=1.349;QD=1.34;ReadPosRankSum=1.016;VQSLOD=1.9272;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:79,2:80:99:157,0,449	0/1:16,0:17:0.31:0,0,93	./.	./.	0/1:25,0:24:24.80:25,0,30	0/1:37,0:37:6.86:7,0,194	0/0:39,0:37:15.75:0,16,232	0/0:46,0:42:14.86:0,15,143	0/0:47,0:46:29.72:0,30,309	0/1:63,3:62:99:109,0,404	0/0:24,0:24:14.69:0,15,120	0/0:43,0:42:18.01:0,18,201	0/1:38,1:39:21.47:136,0,21	0/1:39,1:39:1.29:31,0,1	0/0:44,0:44:11.51:0,12,383	0/0:43,0:43:7.27:0,7,342	0/1:50,1:51:0.75:1,0,541	0/1:37,3:39:99:159,0,108	0/1:31,0:27:2.58:3,0,118	0/0:27,0:25:3.74:0,4,9	0/1:116,2:115:99:110,0,217	1/1:36,1:36:15.03:155,15,0	0/1:29,1:29:41.75:42,0,98	0/0:82,1:81:11.33:0,11,779	1/1:32,1:31:3.01:30,3,0	0/1:42,0:39:9.77:117,0,10	0/1:18,0:18:2.56:3,0,46	1/1:12,0:12:2.35:32,2,0
chr10	83430547	.	A	ACG	1615.01	PASS	AB=0.995;AC=19;AF=0.365;AN=52;BaseQRankSum=8.026;DP=1037;FS=42.989;HRun=0;HaplotypeScore=277.2667;InbreedingCoeff=-0.4715;MQ=41.69;MQ0=29;MQRankSum=-2.095;QD=2.20;ReadPosRankSum=-1.309;VQSLOD=1.4171;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:81,0:78:79.69:0,80,947	0/1:14,0:11:42.48:42,0,164	./.	./.	0/0:25,2:23:2.91:0,3,48	0/1:29,0:28:13.21:13,0,353	0/0:48,2:47:40.61:0,41,507	0/1:45,0:34:47.26:47,0,198	0/1:58,0:57:99:142,0,457	0/1:63,0:56:99:211,0,912	0/1:21,0:21:97.26:187,0,97	0/0:35,0:33:51.85:0,52,499	0/0:27,0:27:3.44:0,3,99	0/0:30,0:29:11.51:0,12,67	0/1:39,0:38:50.29:50,0,531	0/1:34,0:34:99:168,0,475	0/1:49,0:47:99:220,0,787	0/1:42,0:40:99:288,0,468	0/1:28,1:24:86.11:86,0,160	0/1:20,0:20:0.88:4,0,1	0/1:122,0:114:47.37:47,0,211	0/0:25,1:24:8.02:0,8,68	0/1:26,0:26:26.63:27,0,209	0/1:59,1:55:99:130,0,846	1/1:26,0:24:0.79:3,1,0	0/1:37,0:33:11.35:11,0,254	0/1:19,0:19:38.83:80,0,39	0/0:11,0:9:1.55:0,2,23
chr10	83430551	.	A	ACG	1099.84	PASS	AB=0.960;AC=12;AF=0.222;AN=54;BaseQRankSum=9.024;DP=1033;FS=15.378;HRun=0;HaplotypeScore=287.0116;InbreedingCoeff=0.2447;MQ=41.79;MQ0=28;MQRankSum=1.019;QD=2.96;ReadPosRankSum=-3.184;VQSLOD=0.3384;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:79,0:76:2.76:0,3,787	0/0:13,0:10:13.64:0,14,175	./.	0/0:5,0:2:5.87:0,6,35	0/1:28,3:27:0.54:1,0,46	0/0:29,0:28:31.08:0,31,388	0/0:48,0:45:57.82:0,58,532	0/1:43,0:30:89.32:89,0,106	0/0:59,0:58:26.88:0,27,564	0/0:62,0:55:60.93:0,61,906	0/0:20,0:20:9.15:0,9,135	0/0:35,0:33:54.21:0,54,505	0/1:24,2:26:18.47:97,0,18	0/1:31,1:31:31.89:33,0,32	0/0:39,0:38:49.34:0,49,587	0/0:34,0:33:11.94:0,12,476	0/0:51,0:49:38.86:0,39,849	0/0:41,0:39:14.96:0,15,378	0/0:30,0:25:1.81:0,2,233	1/1:20,0:20:9.60:110,10,0	0/1:121,7:120:16.57:617,0,17	1/1:29,2:28:18.54:180,19,0	0/0:26,0:26:27.83:0,28,274	0/0:58,0:53:60.05:0,60,918	1/1:26,2:26:8.10:96,8,0	0/1:33,0:29:28.56:29,0,214	0/0:17,0:17:0.50:0,1,26	0/0:11,0:9:10.96:0,11,60
chr10	83430553	.	ACG	A	1871.35	PASS	AB=0.980;AC=22;AF=0.393;AN=56;BaseQRankSum=8.993;DP=1026;FS=28.233;HRun=0;HaplotypeScore=261.3972;InbreedingCoeff=-0.0784;MQ=41.74;MQ0=27;MQRankSum=-2.030;QD=2.73;ReadPosRankSum=-4.606;VQSLOD=0.8589;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:80,0:77:26.32:26,0,670	0/0:13,0:10:0.69:0,1,131	0/0:4,0:1:2.96:0,3,19	0/0:6,0:2:5.60:0,6,28	0/1:31,0:27:3.16:3,0,18	0/1:28,1:28:22.66:23,0,291	0/0:48,0:45:22.05:0,22,418	0/1:44,0:31:99:207,0,187	0/0:58,2:59:43.94:0,44,566	0/1:58,1:52:99:201,0,555	0/1:18,2:20:2.17:2,0,236	0/0:35,0:34:53.13:0,53,470	0/1:26,0:26:7.42:142,0,7	1/1:31,0:30:11.33:92,11,0	0/0:37,1:37:21.52:0,22,577	0/1:31,1:32:51:51,0,446	0/0:46,4:48:49.53:0,50,881	0/1:37,1:36:99:142,0,241	0/1:29,1:25:99:135,0,132	0/1:21,0:21:12.83:77,0,13	0/1:118,7:117:99:551,0,100	1/1:30,0:27:11.83:52,12,0	0/0:27,0:27:20.77:0,21,250	0/0:57,3:54:38.69:0,39,974	1/1:27,0:25:7.25:49,7,0	0/1:33,0:28:45.64:193,0,46	0/1:17,0:17:26.41:29,0,26	1/1:11,0:9:12.05:66,12,0
chr10	83430555	.	G	GCA	2807.87	PASS	AB=0.951;AC=19;AF=0.339;AN=56;BaseQRankSum=5.191;DP=1063;FS=0.448;HRun=0;HaplotypeScore=305.4709;InbreedingCoeff=0.5293;MQ=41.10;MQ0=27;MQRankSum=-3.030;QD=5.79;ReadPosRankSum=-4.235;VQSLOD=1.5991;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:76,0:74:62.80:0,63,780	0/0:16,0:13:15.43:0,15,157	0/0:5,0:1:3.01:0,3,38	0/0:11,0:2:6.02:0,6,67	0/1:28,2:26:0.01:0,0,0	0/0:29,0:28:32.82:0,33,351	0/0:43,0:42:37.33:0,37,504	1/1:43,1:31:15.51:445,16,0	0/0:61,0:60:63.19:0,63,715	0/1:60,0:54:1.91:2,0,624	0/0:24,0:24:23.77:0,24,254	0/0:35,0:34:50.10:0,50,615	1/1:22,4:26:15.67:144,16,0	1/1:31,2:32:5.62:91,6,0	0/0:38,0:37:46.77:0,47,523	0/0:35,0:35:14.04:0,14,448	0/0:54,0:52:68.82:0,69,969	0/0:39,0:38:39.77:0,40,496	0/1:30,0:26:20.26:228,0,20	0/1:18,3:21:12.18:299,0,12	1/1:120,8:123:60.45:1317,60,0	1/1:30,1:29:6.01:93,6,0	0/0:29,0:29:34.90:0,35,389	0/0:67,0:63:63.46:0,63,881	1/1:25,2:26:5.56:93,6,0	0/1:31,2:28:41.40:258,0,41	1/1:10,6:16:2.74:13,3,0	0/0:11,0:9:2.97:0,3,20
chr10	83430562	.	CACACAT	C	93.31	PASS	AB=0.986;AC=9;AF=0.161;AN=56;BaseQRankSum=6.940;DP=1072;FS=11.048;HRun=0;HaplotypeScore=355.8398;InbreedingCoeff=0.1919;MQ=40.92;MQ0=25;MQRankSum=-7.102;QD=0.60;ReadPosRankSum=-3.707;VQSLOD=0.6207;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,8:66:20.17:0,20,1897	0/0:20,0:17:31.08:0,31,369	0/0:8,0:1:3.01:0,3,70	0/1:17,0:3:6.47:6,0,120	1/1:32,0:27:2.93:25,3,0	0/0:28,0:27:44.99:0,45,841	0/0:40,3:40:6.62:0,7,1194	0/0:41,0:30:37.47:0,37,585	0/0:65,0:64:84.88:0,85,1667	0/0:65,0:59:55.92:0,56,1939	0/0:24,0:24:19.98:0,20,644	0/0:39,0:38:71.12:0,71,1608	0/1:24,1:25:36.95:56,0,37	0/1:31,1:32:7.85:8,0,157	0/0:42,0:42:51.81:0,52,1281	0/0:36,0:35:33.94:0,34,1290	0/0:58,0:56:99:0,125,2630	0/0:37,0:35:80.64:0,81,1314	0/1:22,0:16:25.03:25,0,394	0/0:20,3:23:5.13:0,5,415	0/0:131,6:129:99:0,127,1841	0/0:26,2:25:5.99:0,6,112	0/0:32,0:32:41.36:0,41,1054	0/0:67,0:63:94.72:0,95,2673	0/0:22,1:23:7.23:0,7,107	0/0:32,0:27:14.74:0,15,486	1/1:14,2:16:5.67:88,6,0	0/1:11,0:9:10.92:15,0,11
chr10	83430567	.	ATG	A	791.43	PASS	AB=0.888;AC=15;AF=0.268;AN=56;BaseQRankSum=10.625;DP=993;FS=3.522;HRun=0;HaplotypeScore=290.2991;InbreedingCoeff=-0.3344;MQ=41.53;MQ0=23;MQRankSum=-9.520;QD=2.01;ReadPosRankSum=-5.058;VQSLOD=1.1855;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:57,5:60:3.96:0,4,1176	0/1:20,0:17:71.93:72,0,229	0/0:13,0:1:3.01:0,3,61	0/1:18,2:3:24.26:24,0,113	0/1:16,13:24:0:1,0,0	0/1:24,1:25:1.75:2,0,645	0/0:37,1:35:24.51:0,25,819	0/0:31,1:23:53.50:0,54,801	0/0:48,7:55:8.09:0,8,1159	0/1:57,5:56:99:283,0,1201	0/1:20,3:23:49.37:49,0,344	0/0:32,0:32:47.40:0,47,1138	0/1:19,5:24:72.99:160,0,73	0/1:23,6:29:39.36:39,0,87	0/0:39,1:40:12.66:0,13,941	0/1:36,0:35:20.60:21,0,801	0/0:56,1:55:78.09:0,78,1976	0/1:33,1:32:32.49:32,0,739	0/1:16,2:14:88.81:89,0,341	0/1:20,3:23:18.39:18,0,283	0/0:124,6:122:24.69:0,25,1837	0/0:18,6:21:4.62:0,5,67	0/0:29,2:31:43.53:0,44,793	0/0:62,3:61:22.99:0,23,1589	0/0:17,3:20:5.38:0,5,69	0/1:26,3:24:64.95:65,0,519	0/1:10,3:13:20.35:20,0,64	0/1:7,2:7:22.72:61,0,23
chr10	83430593	.	ATG	A	299	PASS	AB=0.941;AC=9;AF=0.161;AN=56;BaseQRankSum=8.621;DP=1085;FS=2.807;HRun=0;HaplotypeScore=297.9798;InbreedingCoeff=0.2859;MQ=41.80;MQ0=29;MQRankSum=-5.269;QD=1.27;ReadPosRankSum=-3.905;VQSLOD=1.5399;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,17:44:21.85:258,22,0	0/0:17,1:14:23.05:0,23,382	0/0:26,2:2:5.95:0,6,65	0/0:37,0:4:12.01:0,12,163	0/1:21,1:19:0.44:0,0,1	0/0:28,0:28:54.59:0,55,1029	1/1:32,6:34:4.74:87,5,0	0/0:41,0:36:53.14:0,53,1568	0/0:41,2:43:45.23:0,45,1435	0/1:61,9:64:16.18:16,0,2451	0/0:25,2:27:39.01:0,39,674	0/0:43,0:43:78.11:0,78,1422	0/1:21,1:22:11.65:12,0,399	0/0:33,0:32:7.22:0,7,226	0/0:38,1:39:66.23:0,66,1249	0/0:36,1:36:33.60:0,34,782	0/0:61,0:59:99:0,128,2724	0/1:31,2:33:49.98:50,0,1060	0/0:27,1:19:7.74:0,8,717	0/0:18,2:20:11.43:0,11,519	0/0:159,6:157:99:0,233,4610	0/0:26,2:26:13.82:0,14,249	0/0:27,2:28:42.90:0,43,832	0/0:63,0:60:91.29:0,91,1738	0/0:15,4:19:6.62:0,7,124	0/0:45,1:40:99:0,99,1736	0/0:17,0:17:0.04:0,0,266	0/1:4,0:3:10.83:11,0,55
chr10	83430595	.	GCA	G	202.57	PASS	AB=0.957;AC=5;AF=0.089;AN=56;BaseQRankSum=5.705;DP=1118;FS=8.500;HRun=0;HaplotypeScore=310.3076;InbreedingCoeff=0.5879;MQ=41.46;MQ0=31;MQRankSum=-2.768;QD=2.01;ReadPosRankSum=-1.519;VQSLOD=0.9191;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:39,3:43:22.15:227,22,0	0/0:18,1:15:26.60:0,27,434	0/0:30,0:2:2.97:0,3,20	0/0:38,0:4:3.01:0,3,50	0/0:23,0:19:0.27:0,0,1	0/0:27,0:27:54.61:0,55,849	1/1:26,3:31:9.88:87,10,0	0/0:41,0:38:84.84:0,85,1232	0/0:48,0:48:73.60:0,74,1196	0/0:73,0:67:99:0,122,2419	0/0:27,0:27:29.87:0,30,501	0/0:46,0:46:75.56:0,76,1149	0/1:21,1:22:3.95:4,0,394	0/0:27,5:31:19.53:0,20,239	0/0:39,1:40:60.37:0,60,974	0/0:38,0:37:41.50:0,42,709	0/0:62,1:60:99:0,159,2482	0/0:33,0:33:66.53:0,67,1056	0/0:27,2:20:7.43:0,7,556	0/0:22,0:22:22.53:0,23,371	0/0:157,3:159:99:0,159,3669	0/0:29,0:27:14.31:0,14,250	0/0:30,0:29:36.11:0,36,574	0/0:64,2:63:51.16:0,51,1344	0/0:17,3:20:9.97:0,10,147	0/0:49,1:44:79.60:0,80,1698	0/0:15,1:16:17.95:0,18,273	0/0:5,0:4:2.98:0,3,50
chr10	83430629	.	G	GCACA	800.65	PASS	AB=0.699;AC=7;AF=0.125;AN=56;BaseQRankSum=3.616;DP=1146;FS=38.170;HRun=0;HaplotypeScore=332.2423;InbreedingCoeff=0.4511;MQ=41.82;MQ0=34;MQRankSum=-5.668;QD=6.35;ReadPosRankSum=-3.415;VQSLOD=1.2934;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:4.86:0,5,77	0/0:18,0:17:16.89:0,17,207	0/0:25,0:2:6.02:0,6,96	0/0:35,0:7:18.06:0,18,307	0/1:15,5:19:0:0,0,0	0/0:35,0:35:49.79:0,50,790	0/0:35,0:29:20.38:0,20,331	0/0:38,0:29:34.55:0,35,830	0/0:52,0:51:60.84:0,61,989	0/0:82,0:75:86.34:0,86,2514	0/0:23,0:22:30.95:0,31,551	0/0:52,0:52:82.32:0,82,1402	0/1:7,17:24:41.95:374,0,42	0/1:22,14:35:32.94:150,0,33	0/0:36,0:37:52.27:0,52,845	0/0:33,0:33:32.85:0,33,770	0/0:58,0:56:67.54:0,68,1895	0/0:35,0:35:75.12:0,75,1274	0/0:38,0:26:11.54:0,12,746	0/0:27,0:27:31.47:0,31,575	0/0:176,0:164:99:0,268,4732	1/1:18,8:24:12.93:319,13,0	0/0:31,0:30:30.77:0,31,500	0/0:79,0:77:99:0,103,2091	1/1:18,1:19:2.03:78,2,0	0/0:59,0:51:73.02:0,73,1403	0/0:16,0:16:10.08:0,10,469	0/0:5,0:4:11.89:0,12,146
chr10	83430659	.	ATG	A	283.62	PASS	AB=0.916;AC=7;AF=0.130;AN=54;BaseQRankSum=8.338;DP=1041;FS=2.146;HRun=0;HaplotypeScore=219.9722;InbreedingCoeff=0.2248;MQ=41.73;MQ0=38;MQRankSum=-6.644;QD=2.31;ReadPosRankSum=-2.336;VQSLOD=2.2053;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,4:23:11.96:0,12,173	0/1:14,0:12:26.70:27,0,172	1/1:24,0:2:1.25:3,1,0	0/0:28,0:8:21.04:0,21,355	./.	0/0:34,0:34:42.05:0,42,739	1/1:29,8:29:1.03:207,1,0	0/0:25,0:14:35.20:0,35,561	0/0:43,0:42:41.90:0,42,817	0/0:79,0:67:71.24:0,71,2544	0/0:23,0:22:26.81:0,27,499	0/0:50,0:50:23.89:0,24,1341	0/0:20,1:17:23.78:0,24,413	0/0:34,0:31:11.14:0,11,158	0/0:41,0:41:14.83:0,15,1039	0/0:26,0:26:35.75:0,36,877	0/0:48,1:48:99:0,101,2047	0/0:34,0:32:50.46:0,50,1475	0/0:31,0:19:21.83:0,22,724	0/0:23,2:24:28.66:0,29,531	0/0:183,3:174:99:0,263,4890	0/0:24,0:21:14.88:0,15,305	0/0:23,0:22:23.83:0,24,372	0/0:74,0:71:99:0,141,2629	0/0:15,0:14:3.17:0,3,62	0/1:36,3:27:99:109,0,393	0/0:15,0:15:28.10:0,28,445	0/1:7,2:7:49.08:49,0,150
chr10	83430661	.	GCA	G	152.90	PASS	AB=0.958;AC=7;AF=0.130;AN=54;BaseQRankSum=7.610;DP=1041;FS=2.790;HRun=0;HaplotypeScore=219.1671;InbreedingCoeff=0.3351;MQ=40.96;MQ0=39;MQRankSum=-5.864;QD=1.25;ReadPosRankSum=-0.059;VQSLOD=2.1723;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:11.35:0,11,116	0/1:12,2:12:22.28:22,0,171	1/1:22,0:1:1.55:4,2,0	0/0:31,0:7:18.06:0,18,290	./.	0/0:27,6:33:37.83:0,38,615	1/1:36,1:29:17.35:209,17,0	0/0:24,0:14:27.02:0,27,405	0/0:35,7:42:18.99:0,19,732	0/0:81,1:69:99:0,100,1900	0/0:23,1:23:26.71:0,27,430	0/0:45,2:46:7.41:0,7,1121	0/0:19,0:15:26.23:0,26,389	0/0:35,0:32:9.29:0,9,138	0/0:37,3:41:53.74:0,54,892	0/0:23,4:27:1.27:0,1,651	0/0:46,2:47:70.61:0,71,1671	0/0:34,0:32:42.21:0,42,1226	0/0:30,0:18:36.55:0,37,526	0/0:24,2:25:27.85:0,28,436	0/0:185,0:173:99:0,223,3672	0/0:24,0:21:14.05:0,14,258	0/0:22,2:23:19.62:0,20,316	0/0:69,4:70:99:0,138,2307	0/0:16,0:14:3.48:0,3,53	0/1:36,0:26:31.34:31,0,180	0/0:14,0:14:21.06:0,21,350	0/1:9,0:7:0.48:0,0,75
chr10	83430669	.	ACG	A	199.88	PASS	AB=0.985;AC=10;AF=0.185;AN=54;BaseQRankSum=9.186;DP=989;FS=1.222;HRun=0;HaplotypeScore=206.5350;InbreedingCoeff=0.1861;MQ=41.05;MQ0=40;MQRankSum=-7.547;QD=0.89;ReadPosRankSum=-3.645;VQSLOD=1.3998;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:17:6.67:7,0,29	0/1:11,0:9:12.42:12,0,196	1/1:19,0:1:1.55:4,2,0	0/0:28,0:6:17.99:0,18,277	./.	0/0:29,0:29:26.07:0,26,654	1/1:30,1:24:20.67:139,21,0	0/0:20,0:12:25.47:0,25,408	0/0:46,0:45:48.07:0,48,838	0/1:76,0:62:21.54:22,0,1401	0/0:24,0:23:6.84:0,7,362	0/0:48,0:47:45.46:0,45,1207	0/0:22,0:18:31.04:0,31,349	0/0:35,0:32:8.72:0,9,122	0/0:34,0:33:56.96:0,57,962	0/0:27,0:26:30.59:0,31,790	0/0:48,1:47:67.63:0,68,1759	0/0:35,0:33:69.13:0,69,1292	0/0:23,0:16:12.03:0,12,417	0/0:23,1:23:23.68:0,24,377	0/0:180,0:164:99:0,221,3717	0/0:26,0:23:13.84:0,14,287	0/1:25,0:23:0.01:0,0,316	0/0:76,0:73:99:0,147,2516	0/0:13,1:12:3.48:0,3,59	0/1:34,0:23:21:105,0,21	0/0:11,0:11:21.05:0,21,324	0/1:9,1:7:13.49:43,0,13
chr10	83430670	.	C	CAT	52.61	PASS	AB=0.967;AC=6;AF=0.111;AN=54;BaseQRankSum=6.671;DP=973;FS=10.769;HRun=0;HaplotypeScore=206.5834;InbreedingCoeff=0.0477;MQ=41.24;MQ0=37;MQRankSum=-4.295;QD=0.48;ReadPosRankSum=-2.264;VQSLOD=1.5591;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:17:16.05:47,0,16	0/0:11,0:9:14.19:0,14,185	1/1:19,0:1:0.89:2,1,0	0/0:29,0:6:18.06:0,18,287	./.	0/0:26,0:26:39.03:0,39,601	0/1:30,0:24:11.14:11,0,89	0/0:18,0:11:11.28:0,11,336	0/0:45,1:45:58.83:0,59,752	0/0:74,0:61:99:0,146,1945	0/0:23,0:22:30:0,30,407	0/0:46,0:45:77.42:0,77,1145	0/0:22,0:18:29.43:0,29,314	0/0:33,0:31:5.67:0,6,97	0/0:32,1:32:44.64:0,45,827	0/0:26,0:25:48.48:0,48,688	0/0:49,0:47:99:0,105,1661	0/0:36,0:34:66.74:0,67,1191	0/0:23,0:17:38.48:0,38,433	0/0:20,4:23:25.11:0,25,352	0/0:181,0:164:99:0,217,3422	0/0:23,0:21:14.63:0,15,243	0/0:26,0:24:21.04:0,21,316	0/0:76,0:74:99:0,147,2156	0/0:14,0:12:2.87:0,3,49	0/1:31,0:21:66.76:67,0,74	0/0:11,0:11:21.07:0,21,336	0/1:8,1:6:32.71:33,0,44
chr10	83430677	.	ACG	A	403.84	PASS	AB=0.959;AC=11;AF=0.204;AN=54;BaseQRankSum=9.216;DP=942;FS=7.249;HRun=0;HaplotypeScore=193.3540;InbreedingCoeff=-0.1056;MQ=40.53;MQ0=36;MQRankSum=-8.607;QD=1.41;ReadPosRankSum=-3.481;VQSLOD=0.9532;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:19:8.41:0,8,106	0/1:12,1:11:56.38:56,0,160	1/1:18,0:1:1.55:4,2,0	0/0:25,0:4:11.80:0,12,128	./.	0/0:25,0:25:38.37:0,38,596	0/1:31,0:24:5.34:5,0,54	0/0:19,0:11:23.68:0,24,281	0/0:43,0:42:51.66:0,52,864	0/1:61,12:57:99:341,0,1223	0/0:18,5:22:2.48:0,2,294	0/1:45,3:45:2.41:2,0,1077	0/1:18,1:15:4.47:4,0,158	0/1:28,0:25:0.81:1,0,50	0/0:31,2:32:53.82:0,54,848	0/0:26,0:24:26.04:0,26,742	0/0:50,0:47:78.05:0,78,1714	0/0:34,0:32:73.77:0,74,1162	0/1:21,1:17:46.99:47,0,331	0/0:22,3:24:20.05:0,20,310	0/0:174,0:155:99:0,176,2785	0/0:22,3:22:14.57:0,15,184	0/0:22,2:22:17.94:0,18,275	0/0:69,3:70:99:0,147,2387	0/0:15,0:13:3.48:0,3,56	0/1:25,0:17:17.98:18,0,116	0/0:10,0:10:17.07:0,17,242	0/1:9,0:6:43.10:48,0,43
chr10	83430693	.	GCA	G	46.01	PASS	AB=0.914;AC=10;AF=0.185;AN=54;BaseQRankSum=4.112;DP=1013;FS=10.852;HRun=0;HaplotypeScore=216.9182;InbreedingCoeff=0.3556;MQ=38.40;MQ0=60;MQRankSum=-2.902;QD=0.28;ReadPosRankSum=-1.991;VQSLOD=1.5380;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:21:14.97:0,15,256	0/0:16,0:14:17.87:0,18,192	./.	0/0:20,0:3:5.97:0,6,45	0/1:12,3:13:0:0,0,0	0/0:31,0:30:35.95:0,36,471	0/0:36,0:28:11.66:0,12,176	0/1:24,1:15:9.17:9,0,328	0/0:42,0:40:51.84:0,52,839	0/0:95,0:69:99:0,136,2061	0/0:27,1:26:28.63:0,29,419	0/0:49,0:46:65.91:0,66,942	0/1:17,1:15:10.77:11,0,149	0/1:22,3:20:0.12:0,0,0	0/0:37,0:34:40.84:0,41,601	0/0:30,0:26:46.70:0,47,654	0/0:51,0:45:98.98:0,99,1531	0/0:40,0:36:87.19:0,87,1372	0/0:26,0:16:38.96:0,39,549	0/0:34,0:32:17.24:0,17,215	0/0:163,1:133:99:0,100,1502	1/1:19,3:21:0.76:35,1,0	0/0:28,0:25:21.17:0,21,290	0/0:70,0:64:99:0,137,2166	0/1:22,1:20:0.26:0,0,0	0/1:22,3:14:83.84:84,0,122	0/0:12,0:11:21.26:0,21,258	1/1:9,0:6:2.96:19,3,0
chr10	83430703	.	ACG	A	88.63	PASS	AB=0.988;AC=11;AF=0.204;AN=54;BaseQRankSum=6.734;DP=1024;FS=2.017;HRun=0;HaplotypeScore=207.4864;InbreedingCoeff=0.2156;MQ=37.81;MQ0=82;MQRankSum=-2.455;QD=0.34;ReadPosRankSum=-4.655;VQSLOD=1.8594;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:27:15.24:0,15,281	0/0:17,0:15:1.27:0,1,116	./.	0/0:19,0:3:3:0,3,29	0/1:16,0:15:0:0,0,0	0/1:28,0:26:0.32:0,0,437	0/0:31,0:24:8.35:0,8,168	0/0:33,0:17:13.67:0,14,355	0/0:41,0:39:46.62:0,47,888	0/1:100,1:71:75.44:75,0,1744	0/0:26,1:24:28.14:0,28,388	0/0:48,1:46:33.67:0,34,822	0/1:15,0:12:8.54:9,0,65	0/1:19,0:14:0:0,0,0	0/0:39,0:35:38.77:0,39,571	0/0:29,0:24:9.82:0,10,618	0/0:46,0:40:77.29:0,77,1609	0/0:39,0:36:92.59:0,93,1484	0/0:42,0:17:20.72:0,21,517	0/0:29,2:29:6.62:0,7,138	0/0:163,0:132:93.23:0,93,1331	1/1:24,1:22:0.12:9,0,0	0/0:30,0:26:17.63:0,18,320	0/0:74,1:68:99:0,122,2379	0/1:23,1:22:0.35:0,0,1	0/1:26,1:13:65.07:65,0,79	0/0:12,0:11:1.56:0,2,170	1/1:2,1:3:3.01:39,3,0
chr10	83430719	.	A	ACATG	485.94	PASS	AB=0.906;AC=12;AF=0.222;AN=54;BaseQRankSum=6.885;DP=995;FS=54.444;HRun=0;HaplotypeScore=214.1204;InbreedingCoeff=0.1782;MQ=36.77;MQ0=82;MQRankSum=-5.972;QD=2.08;ReadPosRankSum=-0.964;VQSLOD=1.0663;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,3:30:15.15:0,15,292	0/0:21,0:20:11.72:0,12,72	./.	0/0:11,0:1:3.01:0,3,35	0/0:14,0:14:0.47:0,0,1	0/0:22,0:20:24.38:0,24,603	0/1:32,2:27:56.96:57,0,144	0/0:35,0:16:11.21:0,11,396	0/0:42,0:38:33.22:0,33,1114	0/0:100,0:68:88.23:0,88,2518	0/0:29,0:25:30.10:0,30,560	0/0:51,0:44:76.45:0,76,1388	1/1:7,5:8:5.82:135,6,0	1/1:17,1:14:0.25:1,0,0	0/0:41,0:36:51.11:0,51,905	0/0:30,0:25:51.71:0,52,880	0/0:48,0:43:99:0,111,1911	0/0:34,0:31:72.86:0,73,1513	0/1:44,1:16:99:119,0,390	0/1:25,5:29:13.03:13,0,110	0/0:135,0:107:52.30:0,52,918	0/1:21,3:21:7.19:7,0,7	0/0:32,0:28:41.67:0,42,751	0/0:68,0:59:99:0,138,2595	1/1:26,0:22:1.01:4,1,0	0/1:33,0:19:45.88:46,0,279	0/1:8,3:10:63.11:233,0,63	0/0:4,0:4:1.55:0,2,4
chr10	83430721	.	A	ATG	143.38	PASS	AB=0.987;AC=14;AF=0.259;AN=54;BaseQRankSum=7.209;DP=987;FS=56.825;HRun=0;HaplotypeScore=199.1727;InbreedingCoeff=0.2453;MQ=36.84;MQ0=78;MQRankSum=-6.615;QD=0.58;ReadPosRankSum=-0.899;VQSLOD=0.9299;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:31:16.98:0,17,251	0/0:19,0:19:6.43:0,6,54	./.	0/0:10,0:1:3.01:0,3,39	0/1:15,0:15:0.11:0,0,0	0/0:22,0:20:27.17:0,27,524	0/1:32,0:26:20.29:20,0,125	0/0:34,0:15:12.30:0,12,401	0/0:41,1:38:37.37:0,37,999	0/0:100,1:70:99:0,113,2505	0/0:29,0:25:29.58:0,30,484	0/0:50,1:45:76.50:0,76,1208	1/1:11,0:7:5.80:83,6,0	1/1:19,0:15:0.01:0,0,0	0/0:40,2:37:51.17:0,51,815	0/0:30,0:25:53.98:0,54,792	0/0:47,0:42:99:0,111,1654	0/0:34,0:31:36.15:0,36,1285	0/1:40,0:13:19.66:20,0,361	0/1:32,0:30:12.55:13,0,90	0/0:133,0:106:51.79:0,52,813	1/1:25,0:22:5.65:23,6,0	0/0:33,0:29:42.46:0,42,670	0/0:65,0:57:99:0,138,2217	1/1:25,0:22:0.44:3,0,0	0/1:32,2:21:50.49:50,0,350	0/1:11,0:10:64.78:65,0,108	0/0:4,0:4:2.84:0,3,14
chr10	83430727	.	ACG	A	281.31	PASS	AB=0.949;AC=13;AF=0.250;AN=52;BaseQRankSum=8.083;DP=978;FS=1.937;HRun=0;HaplotypeScore=198.5989;InbreedingCoeff=0.1357;MQ=37.16;MQ0=73;MQRankSum=-5.491;QD=0.83;ReadPosRankSum=-1.713;VQSLOD=2.4180;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,6:33:18.48:18,0,78	1/1:24,1:23:13.43:74,13,0	./.	./.	0/1:12,0:14:0.04:0,0,0	0/0:22,1:21:33.58:0,34,503	0/1:30,1:26:6.41:34,0,6	0/1:35,0:14:14.31:14,0,120	0/0:45,0:41:53.40:0,53,920	0/1:92,2:67:99:118,0,1601	0/0:30,0:26:28.85:0,29,429	0/0:48,0:42:49.62:0,50,1030	0/1:9,0:7:12.24:12,0,29	0/0:19,0:15:0.33:0,0,1	0/0:39,2:36:18.63:0,19,745	0/0:31,0:26:32.68:0,33,745	0/0:47,0:42:59.97:0,60,1389	0/0:35,0:33:81.95:0,82,1274	0/1:38,0:11:0.58:1,0,154	0/0:28,3:30:5.39:0,5,50	0/0:123,0:101:24.91:0,25,232	0/0:22,0:21:1.25:0,1,4	0/0:34,0:29:19.33:0,19,523	0/0:65,0:57:99:0,137,2242	0/0:26,0:24:0.25:0,0,1	0/1:36,0:21:57.92:58,0,235	0/1:10,2:11:67.31:67,0,100	1/1:5,0:4:2.98:22,3,0
chr10	83430729	.	GCA	G	157.21	PASS	AB=0.949;AC=13;AF=0.250;AN=52;BaseQRankSum=6.002;DP=964;FS=5.873;HRun=0;HaplotypeScore=196.0525;InbreedingCoeff=0.3015;MQ=37.24;MQ0=73;MQRankSum=-4.052;QD=0.50;ReadPosRankSum=-1.069;VQSLOD=1.9985;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,10:34:2.83:38,3,0	0/1:24,2:24:17.19:17,0,42	./.	./.	0/1:12,0:14:0.04:0,0,0	0/0:23,0:21:31.55:0,32,466	1/1:25,7:26:5.17:75,5,0	1/1:33,2:14:2.99:39,3,0	0/0:45,0:41:58.71:0,59,976	0/0:94,0:68:66.21:0,66,1776	0/0:26,0:25:27.08:0,27,424	0/0:46,1:41:65.91:0,66,1078	0/0:9,0:7:2.27:0,2,39	0/0:14,2:13:0.45:0,0,1	0/0:40,1:36:45.12:0,45,720	0/0:30,2:27:50.38:0,50,757	0/0:42,0:38:69.64:0,70,1167	0/0:35,0:33:72.21:0,72,1115	0/1:35,1:10:26.71:27,0,74	0/0:26,4:29:4.79:0,5,32	0/1:114,0:96:11.16:44,0,11	0/0:12,5:20:1.52:0,2,4	0/0:34,1:30:1.04:0,1,522	0/0:62,0:55:99:0,129,2118	0/0:23,2:24:0.57:0,1,2	0/0:39,0:24:24.99:0,25,494	0/1:12,0:11:19.90:20,0,118	1/1:3,2:4:3.01:32,3,0
chr10	83430737	.	A	ACAGG	176.68	PASS	AB=0.981;AC=11;AF=0.212;AN=52;BaseQRankSum=6.864;DP=942;FS=24.855;HRun=0;HaplotypeScore=239.8641;InbreedingCoeff=-0.0802;MQ=37.24;MQ0=54;MQRankSum=-5.216;QD=0.59;ReadPosRankSum=-3.748;VQSLOD=0.3621;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:27:1.14:0,1,29	0/1:26,0:25:14.85:15,0,70	./.	./.	0/0:12,0:14:0.47:0,0,1	0/0:26,0:24:0.76:0,1,512	0/1:33,0:27:29.07:29,0,80	0/1:23,0:7:12.60:13,0,13	0/0:48,0:45:61.31:0,61,1279	0/0:95,0:73:99:0,131,2738	0/0:30,0:29:26.91:0,27,513	0/0:46,0:40:73.07:0,73,1335	0/1:11,0:9:19.20:19,0,23	0/0:15,2:15:0.35:0,0,1	0/0:39,0:36:45.12:0,45,833	0/0:31,0:27:56.51:0,57,1034	0/0:36,0:33:78.24:0,78,1472	0/0:35,0:33:29.74:0,30,1357	0/0:24,0:9:12.02:0,12,151	0/1:32,0:30:30.97:55,0,31	0/1:99,0:81:11.72:44,0,12	0/1:20,2:20:7.56:26,0,8	0/0:37,0:33:41.69:0,42,742	0/0:62,0:56:99:0,114,2559	1/1:32,0:28:0.65:3,1,0	0/0:49,0:32:36.80:0,37,953	0/1:10,1:10:85.62:86,0,86	0/1:8,0:7:16.65:17,0,33
chr10	83430740	.	CAT	C	117.52	PASS	AB=0.991;AC=12;AF=0.231;AN=52;BaseQRankSum=7.079;DP=895;FS=14.623;HRun=0;HaplotypeScore=219.0899;InbreedingCoeff=0.2668;MQ=37.72;MQ0=51;MQRankSum=-5.285;QD=0.42;ReadPosRankSum=-4.163;VQSLOD=0.6608;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:29:3.16:15,3,0	0/1:26,1:25:36.65:37,0,48	./.	./.	0/1:15,0:15:0.04:0,0,0	0/0:23,1:22:25.94:0,26,505	0/1:33,0:27:12.66:45,0,13	1/1:17,0:4:2.96:19,3,0	0/0:48,0:45:62.24:0,62,1201	0/0:90,1:72:48.84:0,49,2116	0/0:27,0:25:27.55:0,28,525	0/0:46,1:42:78.66:0,79,1362	0/0:10,0:9:8.02:0,8,79	0/0:17,0:15:0.94:0,1,2	0/0:35,1:34:37.03:0,37,847	0/0:31,0:27:54.07:0,54,946	0/0:36,0:33:85.43:0,85,1425	0/0:29,0:28:78.19:0,78,1409	0/1:21,0:7:17.69:18,0,98	0/0:31,0:29:5.93:0,6,40	1/1:63,17:63:6.74:97,7,0	0/0:22,0:20:2.91:0,3,7	0/0:36,1:32:12.99:0,13,591	0/0:64,0:59:99:0,156,2689	0/0:29,2:27:0.67:0,1,3	0/1:46,1:32:8.66:9,0,739	0/0:11,0:10:9.72:0,10,188	0/1:8,0:7:12.93:13,0,19
chr10	83430741	.	ATG	A	170.94	PASS	AB=0.965;AC=8;AF=0.154;AN=52;BaseQRankSum=7.240;DP=879;FS=9.963;HRun=0;HaplotypeScore=218.8478;InbreedingCoeff=0.1767;MQ=38.07;MQ0=49;MQRankSum=-5.086;QD=0.76;ReadPosRankSum=-4.888;VQSLOD=0.2336;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:29:2.96:0,3,9	0/1:25,2:25:68.88:83,0,69	./.	./.	0/1:14,1:15:0.04:0,0,0	0/1:27,0:25:14.20:14,0,515	0/1:33,0:26:38.12:48,0,38	0/0:17,0:4:0.47:0,0,1	0/0:47,1:45:51.34:0,51,1225	0/0:84,2:71:20.88:0,21,2360	0/0:27,0:25:27.47:0,27,535	0/0:45,1:41:78.69:0,79,1448	0/0:9,0:8:8.06:0,8,64	0/0:15,2:15:0.93:0,1,1	0/0:36,0:34:36.81:0,37,866	0/0:30,0:27:56.72:0,57,978	0/0:36,0:33:87.17:0,87,1512	0/0:28,1:28:78.19:0,78,1433	0/0:21,0:7:3.61:0,4,100	0/0:30,1:29:6.21:0,6,25	1/1:67,2:54:5.98:72,6,0	0/0:21,0:19:3:0,3,7	0/0:36,1:32:29.38:0,29,601	0/0:66,0:61:99:0,159,2832	0/0:26,5:27:0.36:0,0,2	0/1:43,4:33:66.36:66,0,968	0/0:9,1:9:17.41:0,17,251	0/1:8,0:7:3:3,0,47
chr10	83430753	.	ATG	A	148.85	PASS	AB=0.948;AC=8;AF=0.148;AN=54;BaseQRankSum=8.249;DP=911;FS=16.110;HRun=0;HaplotypeScore=221.0468;InbreedingCoeff=0.1217;MQ=38.49;MQ0=37;MQRankSum=-6.754;QD=0.52;ReadPosRankSum=-5.059;VQSLOD=0.2148;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:30:12.53:0,13,208	0/1:26,3:27:73.72:99,0,74	0/1:17,1:5:29.03:29,0,133	0/0:21,2:3:5.91:0,6,77	0/1:15,1:16:0.04:0,0,0	0/0:29,0:28:21.26:0,21,640	0/0:44,0:36:12.08:0,12,363	./.	0/0:48,0:46:42.46:0,42,1196	0/1:90,5:83:58.43:58,0,2604	0/0:31,0:29:32.98:0,33,606	0/0:47,1:44:93.29:0,93,1700	0/0:9,0:8:10.30:0,10,67	0/0:13,1:13:0.94:0,1,1	0/0:33,0:31:0.94:0,1,713	0/0:29,0:26:30.84:0,31,789	0/0:33,0:30:63.59:0,64,1402	0/0:31,0:31:74.64:0,75,1352	0/1:12,0:4:26.73:27,0,40	0/0:26,1:25:4.46:0,4,18	1/1:68,2:53:8.59:48,9,0	0/0:20,2:20:2.57:0,3,7	0/0:38,1:33:39.35:0,39,768	0/0:67,0:63:99:0,156,2959	0/0:31,4:31:0.74:0,1,3	0/1:46,3:39:10.71:11,0,1114	0/0:9,0:9:1.82:0,2,114	0/0:8,0:7:6.07:0,6,67
chr10	83430759	.	A	ATG	75.74	PASS	AB=0.949;AC=12;AF=0.214;AN=56;BaseQRankSum=7.667;DP=920;FS=47.456;HRun=0;HaplotypeScore=226.6058;InbreedingCoeff=0.2556;MQ=39.00;MQ0=34;MQRankSum=-7.093;QD=0.30;ReadPosRankSum=-1.809;VQSLOD=1.0879;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:31:10.40:0,10,194	0/1:26,0:25:52.75:53,0,151	0/0:18,0:6:14.57:0,15,227	0/0:26,0:3:6.02:0,6,98	0/1:14,2:16:0:0,0,0	0/0:33,0:32:0.91:0,1,560	0/0:45,0:37:23.53:0,24,391	0/0:7,0:3:2.80:0,3,13	0/0:50,1:48:65.22:0,65,1024	0/1:93,1:84:42.30:42,0,2504	0/0:34,1:33:33.03:0,33,536	0/0:48,0:46:99:0,99,1568	0/1:7,2:8:0.40:54,0,0	1/1:10,3:13:0.36:1,0,0	0/0:34,0:31:55.89:0,56,964	0/0:29,0:27:18.81:0,19,667	0/0:27,0:26:72.21:0,72,1119	0/0:28,0:29:16.50:0,17,1029	0/0:11,0:4:8.96:0,9,82	0/1:24,0:22:8.45:8,0,24	0/0:76,0:57:14.57:0,15,168	1/1:21,2:23:2.74:9,3,0	0/0:36,0:31:33.41:0,33,540	0/0:70,0:65:99:0,169,2664	1/1:29,6:31:1.94:25,2,0	0/0:52,0:41:70.63:0,71,1238	0/1:8,0:8:4.74:5,0,104	0/0:8,0:7:9:0,9,103
chr10	83430760	.	CACAT	C	156.66	PASS	AB=0.976;AC=13;AF=0.232;AN=56;BaseQRankSum=8.846;DP=921;FS=20.998;HRun=0;HaplotypeScore=236.8037;InbreedingCoeff=0.2132;MQ=39.01;MQ0=33;MQRankSum=-7.083;QD=0.46;ReadPosRankSum=-4.284;VQSLOD=0.4969;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:32:11.33:0,11,319	0/1:24,1:24:99:134,0,158	0/0:20,0:6:9.34:0,9,274	0/0:26,0:3:6.02:0,6,159	0/1:16,0:16:0.14:0,0,0	0/1:33,1:33:8.80:9,0,860	0/0:45,0:37:23.50:0,24,634	0/0:7,0:3:4.91:0,5,21	0/0:51,1:49:66:0,66,1524	0/1:93,0:83:54.31:54,0,2958	0/0:33,2:33:32.85:0,33,721	0/0:48,0:46:98.05:0,98,2357	0/1:9,0:8:5.41:5,0,14	1/1:13,0:13:2.54:17,3,0	0/0:33,1:31:37.91:0,38,1233	0/0:28,0:27:4.77:0,5,855	0/0:24,2:25:4.68:0,5,1487	0/0:30,0:30:42.22:0,42,1531	0/1:10,0:4:2.05:2,0,3	1/1:23,1:22:0.83:4,1,0	0/1:77,0:57:3.25:39,0,3	0/0:23,1:22:0.94:0,1,3	0/0:36,1:32:25.70:0,26,791	0/0:70,0:65:99:0,156,3792	0/1:29,6:31:0.25:0,0,2	0/0:51,0:40:65.58:0,66,1600	0/1:8,0:8:0.16:14,0,0	0/0:8,0:7:6.12:0,6,89
chr10	83430762	.	CAT	C	939.95	PASS	AB=0.899;AC=20;AF=0.357;AN=56;BaseQRankSum=9.058;DP=909;FS=34.084;HRun=0;HaplotypeScore=211.8581;InbreedingCoeff=0.3712;MQ=39.10;MQ0=35;MQRankSum=-8.882;QD=2.42;ReadPosRankSum=-5.001;VQSLOD=0.1902;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,3:31:11.87:0,12,226	0/1:22,2:23:71.05:97,0,71	0/0:22,0:6:8.79:0,9,197	0/0:29,0:3:6.02:0,6,112	0/1:12,4:16:0.04:0,0,0	0/0:30,3:32:18.83:0,19,605	0/0:44,3:40:23.45:0,23,462	0/1:8,0:4:1.02:16,0,1	0/0:49,2:48:66.71:0,67,1083	0/1:83,9:82:99:272,0,1950	0/0:33,2:33:30:0,30,492	0/0:46,1:45:98.05:0,98,1668	1/1:4,3:6:8.25:105,8,0	1/1:6,5:11:2.58:17,3,0	0/0:31,3:31:17.44:0,17,860	0/1:25,1:25:19.35:19,0,583	0/0:27,0:26:44.45:0,44,1080	0/0:29,0:29:45.42:0,45,1106	1/1:6,1:3:6.01:72,6,0	1/1:17,5:20:2.95:42,3,0	1/1:35,42:59:20.30:224,20,0	0/0:19,5:22:0.94:0,1,3	0/0:34,3:32:26.35:0,26,560	0/0:71,0:65:99:0,156,2713	0/1:30,5:31:0.13:0,0,1	0/1:44,4:38:49.32:49,0,1022	1/1:2,5:7:8.18:112,8,0	0/1:6,2:7:48.73:82,0,49
chr10	83430799	.	ATG	A	99.81	PASS	AB=0.899;AC=5;AF=0.089;AN=56;BaseQRankSum=6.878;DP=927;FS=3.899;HRun=0;HaplotypeScore=196.6174;InbreedingCoeff=0.0937;MQ=39.05;MQ0=57;MQRankSum=-5.597;QD=0.96;ReadPosRankSum=-3.022;VQSLOD=1.9002;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:24:16.17:0,16,283	0/1:27,1:25:38.75:39,0,429	0/0:24,1:8:15.02:0,15,213	0/0:32,3:8:24.08:0,24,410	0/1:10,0:9:0:1,0,0	0/0:29,3:31:47.24:0,47,915	0/0:42,0:36:28.80:0,29,493	0/0:19,0:12:33.11:0,33,628	0/0:48,2:48:64.64:0,65,1417	0/0:74,3:65:36.64:0,37,2363	0/0:33,3:36:29.33:0,29,531	0/0:42,0:41:70.24:0,70,1644	0/0:9,0:6:9.50:0,10,158	0/0:13,1:13:5.42:0,5,68	0/0:30,1:29:59.16:0,59,1110	0/0:24,0:24:38.33:0,38,876	0/0:30,1:31:46.98:0,47,1549	0/0:25,0:25:57.14:0,57,1054	0/0:19,0:1:3.01:0,3,40	0/0:14,0:13:2.56:0,3,47	0/0:109,8:92:66.24:0,66,1267	0/0:20,1:19:0.09:0,0,1	0/0:28,1:24:23.08:0,23,373	0/0:75,0:69:99:0,159,3109	0/0:25,1:22:0.36:0,0,2	0/1:49,2:41:49.56:50,0,1365	0/1:7,2:9:32.86:33,0,117	0/1:4,2:5:85.01:85,0,88
chr10	83430819	.	G	GCA	130.74	PASS	AB=0.961;AC=13;AF=0.241;AN=54;BaseQRankSum=6.122;DP=851;FS=2.982;HRun=0;HaplotypeScore=176.0920;InbreedingCoeff=0.4065;MQ=39.95;MQ0=40;MQRankSum=-3.033;QD=0.60;ReadPosRankSum=0.201;VQSLOD=2.1268;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:2.56:38,3,0	0/0:21,0:19:22.32:0,22,321	0/0:32,0:5:15.05:0,15,182	0/0:42,0:12:32.90:0,33,361	0/1:6,0:5:0:0,0,0	0/0:33,0:33:28.92:0,29,463	0/0:33,0:30:0.31:0,0,1	0/1:12,0:9:3.06:3,0,42	0/0:42,0:42:65.51:0,66,758	0/0:76,0:67:99:0,109,1209	0/0:32,0:31:20.13:0,20,227	0/0:49,0:47:99:0,102,1191	0/1:7,1:6:20.26:26,0,20	0/1:10,2:12:0.58:1,0,22	0/0:29,0:27:66:0,66,805	0/0:19,0:18:31.97:0,32,399	0/0:29,0:27:72.22:0,72,895	0/0:26,0:26:51.12:0,51,623	./.	0/1:11,0:10:0.03:0,0,0	0/1:110,1:89:39.55:130,0,40	0/1:22,0:20:0:0,0,0	0/0:24,0:18:12.04:0,12,153	0/0:79,0:71:99:0,152,1827	0/0:19,0:18:2.94:0,3,18	0/0:36,0:30:20.11:0,20,133	1/1:9,0:9:8.01:35,8,0	1/1:5,0:4:3.45:22,3,0
chr10	83430831	.	G	GCGCA	1433.60	PASS	AB=0.925;AC=16;AF=0.286;AN=56;BaseQRankSum=-0.221;DP=804;FS=5.439;HRun=0;HaplotypeScore=165.7487;InbreedingCoeff=0.3063;MQ=39.94;MQ0=41;MQRankSum=-2.040;QD=5.95;ReadPosRankSum=-1.529;VQSLOD=2.3935;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:23.56:81,0,24	0/0:18,0:17:34.44:0,34,393	0/0:39,0:6:17.92:0,18,198	0/0:59,0:17:41.87:0,42,598	1/1:8,0:6:2.31:23,2,0	0/0:28,0:28:46.98:0,47,768	0/1:17,0:14:9.48:9,0,34	1/1:8,1:3:3.01:84,3,0	0/0:40,0:40:71.26:0,71,1234	0/0:77,0:67:99:0,144,2110	0/0:25,0:24:7.27:0,7,268	0/0:48,0:46:99:0,114,2012	0/1:9,0:8:29.12:33,0,29	0/0:9,0:10:2.61:0,3,18	0/0:28,0:27:72.12:0,72,1244	0/0:20,0:19:38.16:0,38,747	0/0:36,0:34:96.18:0,96,1641	0/0:22,0:22:60.16:0,60,1066	1/1:11,1:2:3:25,3,0	0/0:8,1:8:0:0,0,0	1/1:75,36:90:54.37:1045,54,0	1/1:18,0:16:2.16:9,2,0	0/0:16,0:11:12.04:0,12,239	0/0:70,0:65:99:0,159,2621	0/0:17,0:17:5.98:0,6,61	0/1:22,0:18:33.51:34,0,86	0/1:4,5:9:5.76:240,0,6	0/1:5,0:4:6.80:7,0,14
chr10	83430839	.	ACG	A	258.65	PASS	AB=0.924;AC=10;AF=0.179;AN=56;BaseQRankSum=6.175;DP=774;FS=1.513;HRun=0;HaplotypeScore=134.7232;InbreedingCoeff=0.2736;MQ=40.20;MQ0=38;MQRankSum=-4.165;QD=2.19;ReadPosRankSum=-5.387;VQSLOD=0.2838;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:14:8.84:67,9,0	0/1:19,0:18:4.01:4,0,210	0/0:37,0:8:1.98:0,2,163	0/0:63,0:16:35.64:0,36,341	0/0:8,0:6:5.69:0,6,39	0/0:28,0:28:37.63:0,38,690	0/1:19,0:14:15.78:21,0,16	0/0:11,0:4:6:0,6,64	0/0:39,0:39:51.16:0,51,1105	0/0:73,0:65:74.58:0,75,1796	0/1:21,0:20:7.23:7,0,233	0/0:47,1:46:99:0,102,1777	0/0:11,0:9:4.89:0,5,44	0/1:12,0:10:0:1,0,0	0/0:29,0:29:56.18:0,56,1190	0/0:20,0:19:41.97:0,42,781	0/0:36,0:34:81.25:0,81,1449	0/0:27,0:27:63.87:0,64,954	0/0:13,0:4:5.88:0,6,36	0/1:8,1:8:0.14:0,0,0	0/0:92,1:73:32:0,32,486	0/0:14,2:14:3.33:0,3,30	0/0:15,0:11:11.94:0,12,231	0/0:67,0:61:99:0,111,2075	0/0:12,0:12:5.38:0,5,48	0/1:8,10:15:22.76:257,0,23	0/0:9,0:9:8.28:0,8,121	1/1:5,0:4:5.18:26,5,0
chr10	83430879	.	GCA	G	477.12	PASS	AB=0.870;AC=7;AF=0.130;AN=54;BaseQRankSum=3.339;DP=686;FS=12.326;HRun=0;HaplotypeScore=100.8475;InbreedingCoeff=0.3406;MQ=41.20;MQ0=45;MQRankSum=-2.001;QD=3.76;ReadPosRankSum=2.308;VQSLOD=1.7561;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:9:0:0,0,0	0/0:12,0:11:12.93:0,13,203	0/0:26,0:5:6.02:0,6,96	0/0:34,0:5:12.04:0,12,167	0/0:10,0:6:6.02:0,6,94	0/0:29,0:26:36.11:0,36,605	0/0:23,0:17:14.51:0,15,141	0/1:12,0:7:13.94:14,0,59	0/0:28,0:25:48.07:0,48,767	0/0:75,0:59:99:0,132,1914	0/0:14,0:10:5.92:0,6,102	0/0:45,0:41:81.24:0,81,1263	0/0:11,0:7:8.99:0,9,107	0/0:20,0:15:3.20:0,3,13	0/0:27,0:25:51.17:0,51,818	0/0:23,0:23:45.09:0,45,657	0/0:27,0:26:21.56:0,22,865	0/0:29,0:28:55.09:0,55,1046	0/1:12,3:8:20.76:102,0,21	0/0:6,3:7:0.47:0,0,1	1/1:59,20:61:30.54:390,31,0	0/0:15,0:11:3.01:0,3,51	0/0:16,0:11:6:0,6,75	0/0:61,0:56:99:0,108,1697	0/0:15,0:14:14.96:0,15,229	0/1:10,4:10:36.99:37,0,136	1/1:3,4:7:5.97:64,6,0	./.
chr10	83430900	.	CAT	C	467.97	PASS	AB=0.971;AC=14;AF=0.280;AN=50;BaseQRankSum=7.512;DP=700;FS=10.130;HRun=0;HaplotypeScore=99.8274;InbreedingCoeff=0.3934;MQ=40.77;MQ0=43;MQRankSum=-4.572;QD=2.26;ReadPosRankSum=-2.608;VQSLOD=0.8180;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:4,3:5:0:0,0,0	0/0:11,0:10:8.76:0,9,97	0/0:28,0:5:14.24:0,14,153	0/0:37,1:6:14.96:0,15,144	./.	0/0:34,0:31:24.94:0,25,624	1/1:14,12:21:11.68:178,12,0	0/1:7,0:5:3.94:43,0,4	0/0:32,0:27:51.42:0,51,767	0/0:76,2:57:6:0,6,1525	0/1:16,1:13:13.87:14,0,108	0/0:41,0:39:67.66:0,68,1195	0/0:9,0:5:6:0,6,52	1/1:23,0:17:4.72:24,5,0	0/0:27,0:25:50.92:0,51,819	0/0:20,0:19:35.68:0,36,556	0/0:36,0:34:36.46:0,36,1147	0/1:29,2:30:22.37:22,0,959	1/1:7,2:5:8.98:72,9,0	./.	1/1:69,4:60:2.51:200,3,0	0/0:11,0:9:2.98:0,3,22	0/0:19,0:13:6.01:0,6,83	0/0:65,0:63:99:0,118,1975	0/0:17,0:15:12.90:0,13,104	0/1:15,0:11:57.89:58,0,75	1/1:5,1:5:0.47:1,0,0	./.
chr10	83430902	.	TAC	T	110.39	PASS	AB=0.912;AC=10;AF=0.192;AN=52;BaseQRankSum=6.198;DP=696;FS=0.875;HRun=0;HaplotypeScore=95.1391;InbreedingCoeff=0.3537;MQ=40.16;MQ0=45;MQRankSum=-4.612;QD=0.94;ReadPosRankSum=-2.261;VQSLOD=1.2733;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:4:0:0,0,0	0/0:7,0:6:5.94:0,6,98	0/0:32,0:6:17.76:0,18,243	0/0:37,0:5:14.94:0,15,197	./.	0/0:35,1:33:44.49:0,44,746	1/1:26,2:22:11.62:104,12,0	0/1:6,0:4:10.96:11,0,29	0/0:29,1:25:53.68:0,54,857	0/0:71,5:53:51.98:0,52,1723	0/0:17,0:13:7.09:0,7,141	0/0:40,1:39:79.94:0,80,1308	0/0:9,0:5:6.02:0,6,77	1/1:24,0:18:2.17:8,2,0	0/0:25,0:23:48.16:0,48,912	0/0:20,0:19:36.09:0,36,638	0/0:34,2:33:27.93:0,28,1229	0/1:28,3:30:36.94:37,0,1069	1/1:9,0:5:4.33:18,4,0	./.	0/0:70,3:59:15.39:0,15,115	0/0:9,1:8:3.01:0,3,45	0/0:16,3:13:6.02:0,6,106	0/0:63,4:64:99:0,123,2181	0/0:17,0:15:15.04:0,15,210	0/1:9,5:10:60.34:60,0,83	0/1:5,0:4:0.15:0,0,0	0/0:1,0:1:2.96:0,3,19
chr10	83430927	.	ATG	A	47.85	PASS	AB=0.956;AC=10;AF=0.200;AN=50;BaseQRankSum=4.994;DP=750;FS=9.864;HRun=0;HaplotypeScore=95.9101;InbreedingCoeff=0.0167;MQ=34.51;MQ0=72;MQRankSum=-2.937;QD=0.25;ReadPosRankSum=-3.449;VQSLOD=0.2555;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/1:9,1:8:24.39:24,0,67	0/0:37,0:9:24.15:0,24,329	0/0:45,0:8:11.03:0,11,207	./.	0/0:30,0:26:27.96:0,28,538	1/1:25,1:20:1.13:4,1,0	0/0:14,0:3:6.02:0,6,114	0/0:28,0:22:4.22:0,4,481	0/1:62,3:41:17.38:17,0,1263	0/0:17,2:16:11.83:0,12,226	0/0:43,1:37:63.77:0,64,1062	0/0:5,0:1:3.01:0,3,61	0/0:28,0:18:2.91:0,3,60	0/1:29,0:24:24.76:25,0,550	0/0:23,1:24:26.24:0,26,415	0/0:38,0:34:44.12:0,44,1180	0/0:27,0:25:47.78:0,48,1056	0/0:18,0:1:3.01:0,3,58	./.	0/0:87,6:68:34.49:0,34,601	0/1:11,0:8:0:0,0,0	0/1:26,1:21:56.96:57,0,110	0/0:64,1:62:99:0,120,2207	0/0:14,2:13:0.59:0,1,148	0/1:17,2:11:30.94:31,0,140	1/1:2,0:2:1.36:2,1,0	0/0:2,0:2:2.68:0,3,11
chr10	83430933	.	A	ATG	135.71	PASS	AB=0.915;AC=3;AF=0.058;AN=52;BaseQRankSum=2.323;DP=778;FS=3.660;HRun=0;HaplotypeScore=107.5844;InbreedingCoeff=0.2992;MQ=33.99;MQ0=79;MQRankSum=-3.044;QD=1.48;ReadPosRankSum=-2.214;VQSLOD=1.2894;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:11,0:8:6.02:0,6,98	0/0:35,0:9:27.06:0,27,405	0/0:40,0:8:24.04:0,24,347	./.	0/0:31,0:27:28.31:0,28,436	1/1:27,0:21:0.26:2,0,0	0/0:19,0:5:12.04:0,12,177	0/0:30,0:24:39.11:0,39,575	0/1:59,6:41:99:209,0,1056	0/0:21,0:18:12.04:0,12,193	0/0:45,0:37:60.20:0,60,970	0/0:9,0:3:3.01:0,3,49	0/0:29,0:17:5.95:0,6,67	0/0:29,0:24:39.13:0,39,613	0/0:26,0:24:24.08:0,24,386	0/0:35,1:33:76.07:0,76,1084	0/0:29,0:27:29.74:0,30,888	0/0:25,0:1:3.01:0,3,38	0/0:11,0:8:0.47:0,0,1	0/0:95,0:63:36.59:0,37,571	0/0:11,1:9:0:0,0,0	0/0:28,0:22:12.04:0,12,184	0/0:66,1:64:99:0,133,2110	0/0:16,0:13:9.44:0,9,147	0/0:21,0:12:21.05:0,21,303	0/0:4,0:4:0:0,0,1	0/0:2,0:2:3.01:0,3,46
chr10	83430939	.	GCA	G	210.95	PASS	AB=0.952;AC=8;AF=0.167;AN=48;BaseQRankSum=5.201;DP=761;FS=20.228;HRun=0;HaplotypeScore=102.6594;InbreedingCoeff=0.2017;MQ=33.77;MQ0=77;MQRankSum=-2.074;QD=0.90;ReadPosRankSum=0.679;VQSLOD=0.5981;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:10,0:7:8.96:0,9,97	0/0:31,0:8:17.85:0,18,199	0/0:37,0:7:12.04:0,12,162	./.	0/0:29,0:26:21.53:0,22,345	0/1:27,0:20:1.18:1,0,8	0/0:18,0:4:6.02:0,6,91	0/0:28,1:24:33.04:0,33,457	0/0:61,0:39:3.67:0,4,613	0/0:21,0:18:9.03:0,9,147	0/1:40,4:39:14.37:14,0,747	0/0:10,0:4:5.90:0,6,62	0/0:26,0:13:5.93:0,6,67	0/0:25,1:21:21.07:0,21,341	0/0:22,3:23:21.52:0,22,325	0/0:37,2:36:16.72:0,17,885	0/0:26,1:25:7.11:0,7,536	./.	0/1:11,1:9:0:0,0,0	1/1:64,24:56:21.06:266,21,0	./.	0/1:28,1:24:29.95:30,0,47	0/0:67,0:64:99:0,125,1943	0/0:15,0:12:6.41:0,6,101	0/1:25,1:14:12.67:13,0,148	0/1:4,0:4:0.08:0,0,1	0/0:1,1:2:3.01:0,3,50
chr10	83430991	.	GCA	G	234.32	PASS	AB=0.894;AC=10;AF=0.238;AN=42;BaseQRankSum=7.101;DP=840;FS=32.300;HRun=0;HaplotypeScore=141.7931;InbreedingCoeff=0.0341;MQ=32.09;MQ0=82;MQRankSum=-5.853;QD=0.90;ReadPosRankSum=0.138;VQSLOD=1.1368;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:16,0:10:5.51:0,6,59	0/0:14,0:1:3:0,3,25	0/0:22,0:4:6.02:0,6,90	./.	0/0:26,1:23:5.96:0,6,75	0/1:24,2:15:13.96:14,0,16	./.	0/0:57,2:48:52.03:0,52,939	0/1:96,1:65:5.31:5,0,1608	./.	0/0:66,1:51:15.41:0,15,787	1/1:7,0:4:0.89:2,1,0	./.	0/0:36,0:27:33.11:0,33,551	0/0:36,0:30:32.93:0,33,552	0/1:34,6:36:72.19:72,0,632	0/1:36,7:40:99:119,0,563	0/0:18,0:2:6.02:0,6,76	0/1:8,1:8:0:0,0,0	0/0:87,3:47:5.07:0,5,36	./.	0/0:27,1:21:9.03:0,9,152	0/0:73,11:75:66.75:0,67,1636	./.	0/1:24,6:21:99:105,0,313	0/0:7,0:6:3.01:0,3,47	1/1:5,0:4:3:27,3,0
chr10	83431002	.	CAT	C	80.28	PASS	AB=0.985;AC=12;AF=0.261;AN=46;BaseQRankSum=5.664;DP=858;FS=9.070;HRun=0;HaplotypeScore=145.6012;InbreedingCoeff=0.1085;MQ=31.89;MQ0=78;MQRankSum=-4.820;QD=0.27;ReadPosRankSum=-0.163;VQSLOD=2.1610;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:12:0:0,0,0	0/1:18,0:12:2.27:2,0,63	0/0:12,0:1:3.01:0,3,42	0/0:19,0:5:2.19:0,2,112	./.	0/0:28,1:26:8.96:0,9,76	0/0:23,4:15:1.23:0,1,36	./.	0/0:63,0:51:70.45:0,70,1160	0/1:97,3:71:46.51:47,0,1969	0/1:21,0:18:0:0,0,0	0/0:66,2:51:31.23:0,31,921	0/1:4,0:2:0:0,0,0	./.	0/0:41,2:32:39.71:0,40,685	0/0:36,0:31:36.80:0,37,683	0/1:43,2:40:38.51:39,0,748	0/1:40,0:38:29.66:30,0,722	0/0:18,0:2:5.99:0,6,50	1/1:8,0:7:2.83:18,3,0	0/0:93,1:54:8.37:0,8,28	./.	0/0:32,0:23:14.90:0,15,222	0/0:79,0:68:93.09:0,93,1924	./.	0/1:35,2:23:43.91:44,0,403	0/0:6,0:5:3:0,3,27	1/1:10,0:7:2.90:16,3,0
chr10	83431067	.	GCGCATACACACACA	G	470.82	PASS	AB=0.970;AC=13;AF=0.325;AN=40;BaseQRankSum=2.791;DP=529;FS=56.709;HRun=0;HaplotypeScore=133.1547;InbreedingCoeff=0.0003;MQ=28.47;MQ0=45;MQRankSum=-1.724;QD=1.81;ReadPosRankSum=-1.362;VQSLOD=0.0822;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/1:10,0:8:0.11:0,0,79	0/0:51,0:2:6:0,6,53	0/0:54,0:7:16.99:0,17,331	./.	0/0:24,1:19:13.09:0,13,203	1/1:6,0:6:0.46:1,0,0	1/1:7,0:2:2.04:6,2,0	0/1:35,3:32:99:161,0,194	0/1:57,0:45:99:199,0,1153	0/0:14,0:11:3.01:0,3,83	0/1:26,5:27:99:124,0,512	./.	./.	0/1:19,0:18:32.86:33,0,334	0/0:16,1:16:3.81:0,4,129	0/0:19,1:18:18.01:0,18,315	0/1:16,0:15:9.95:10,0,497	./.	./.	0/1:60,0:40:0:1,0,0	./.	1/1:15,0:13:3.01:47,3,0	0/0:33,0:28:24.05:0,24,434	./.	0/0:25,0:18:7.15:0,7,406	0/0:2,0:2:2.96:0,3,19	0/0:6,0:5:2.04:0,2,59
chr10	83431093	.	A	ATG	739.33	PASS	AB=0.972;AC=12;AF=0.300;AN=40;BaseQRankSum=0.501;DP=520;FS=25.679;HRun=0;HaplotypeScore=82.5013;InbreedingCoeff=-0.3124;MQ=25.24;MQ0=51;MQRankSum=-0.242;QD=2.25;ReadPosRankSum=-1.679;VQSLOD=0.1539;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:9,0:7:1.46:0,1,19	./.	0/0:27,0:4:11.06:0,11,130	./.	0/1:17,0:13:41.22:41,0,75	0/0:12,0:8:0.32:0,0,1	0/0:27,0:12:12.42:0,12,101	0/1:38,1:29:14.28:14,0,134	0/1:48,5:31:99:236,0,436	0/0:12,0:11:3.01:0,3,31	0/1:29,2:25:92.95:93,0,123	./.	./.	0/0:26,3:26:11.92:0,12,141	0/1:21,2:20:23.54:45,0,24	0/1:18,0:15:28.45:28,0,105	0/1:13,0:13:86.84:160,0,87	1/1:20,0:3:1.82:5,2,0	./.	0/1:83,0:47:15.67:16,0,65	0/0:3,0:3:0:0,0,0	./.	0/1:29,0:24:42.29:210,0,42	./.	0/0:23,0:16:11.91:0,12,212	0/0:2,0:2:3.01:0,3,40	0/1:2,0:2:7.22:7,0,24
chr10	83431111	.	ATG	A	137.79	PASS	AB=0.940;AC=11;AF=0.306;AN=36;BaseQRankSum=5.628;DP=499;FS=1.217;HRun=0;HaplotypeScore=86.8919;InbreedingCoeff=0.0534;MQ=27.64;MQ0=54;MQRankSum=-4.286;QD=0.83;ReadPosRankSum=-0.545;VQSLOD=1.3104;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	0/0:6,2:7:0.99:0,1,58	0/1:10,1:7:0.05:0,0,0	0/1:30,0:12:10.88:11,0,115	0/0:38,5:32:33.07:0,33,633	0/1:47,4:23:25.48:25,0,827	0/0:11,0:10:6.02:0,6,122	0/0:32,2:30:28.43:0,28,433	./.	./.	0/0:22,4:23:2.81:0,3,61	0/0:21,2:20:8.85:0,9,212	0/1:19,2:18:65.06:65,0,378	0/1:14,2:16:4.56:5,0,637	1/1:18,2:2:6.02:96,6,0	./.	0/0:96,8:56:10.56:0,11,163	0/1:3,0:3:0:0,0,0	0/0:11,1:11:3.01:0,3,61	0/0:35,4:35:33.11:0,33,670	./.	0/1:13,1:9:36.85:37,0,111	./.	1/1:1,0:1:2.22:7,2,0
chr10	83431149	.	ATG	A	264.37	PASS	AB=0.974;AC=13;AF=0.310;AN=42;BaseQRankSum=0.182;DP=671;FS=20.676;HRun=0;HaplotypeScore=132.1050;InbreedingCoeff=-0.2624;MQ=30.04;MQ0=59;MQRankSum=-1.832;QD=0.58;ReadPosRankSum=0.393;VQSLOD=1.4113;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:3.01:40,3,0	0/0:6,1:4:4.53:0,5,16	./.	0/0:31,3:4:9.03:0,9,169	./.	0/0:10,2:10:7.87:0,8,28	0/1:11,0:8:0.15:0,0,0	0/0:21,0:5:5.99:0,6,82	0/1:48,1:41:68.73:97,0,69	0/1:63,3:41:34.52:35,0,343	0/0:12,0:11:6.64:0,7,33	0/1:38,2:36:23.10:29,0,23	./.	./.	0/0:33,0:30:6.79:0,7,36	0/1:32,1:27:10.89:11,0,45	0/0:38,0:37:9.65:0,10,173	0/1:25,2:27:83.88:84,0,128	0/0:17,0:3:4.82:0,5,34	./.	0/1:100,2:62:16.13:16,0,39	./.	0/1:20,1:18:14.04:17,0,14	0/1:57,1:53:21.42:21,0,126	./.	0/1:33,0:25:35.89:36,0,139	0/0:4,0:3:2.74:0,3,12	0/1:8,0:7:0.19:0,0,47
chr10	83431150	.	TGC	T	1974.76	PASS	AB=0.992;AC=28;AF=0.636;AN=44;BaseQRankSum=-7.000;DP=672;FS=3.831;HRun=0;HaplotypeScore=122.3452;InbreedingCoeff=0.2394;MQ=30.12;MQ0=56;MQRankSum=6.111;QD=4.27;ReadPosRankSum=3.905;VQSLOD=2.7566;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:2.88:23,3,0	1/1:7,0:4:5.75:29,6,0	0/0:22,1:1:3.01:0,3,51	0/0:33,0:4:9.03:0,9,157	./.	1/1:11,0:9:8.61:44,9,0	0/1:11,0:8:0.15:0,0,0	0/0:20,0:5:6.02:0,6,93	1/1:48,1:41:23.82:325,24,0	0/1:64,1:41:99:268,0,106	1/1:12,0:11:10.46:45,10,0	1/1:38,1:35:34.93:218,35,0	./.	./.	0/1:31,1:29:3.01:31,0,3	1/1:33,0:27:3.85:106,4,0	0/1:38,0:37:11.16:205,0,11	1/1:27,0:28:40.82:309,41,0	0/0:14,0:3:4.87:0,5,16	./.	0/0:103,0:64:1.32:0,1,36	./.	1/1:22,1:20:8.69:73,9,0	1/1:58,1:54:40:320,40,0	./.	0/1:34,0:26:42.97:82,0,43	1/1:4,0:3:2.22:7,2,0	0/1:8,0:7:30.38:30,0,39
chr10	83431151	.	GCA	G	5293.27	PASS	AB=0.801;AC=33;AF=0.750;AN=44;BaseQRankSum=-3.684;DP=674;FS=6.247;HRun=0;HaplotypeScore=112.5176;InbreedingCoeff=0.4572;MQ=30.24;MQ0=51;MQRankSum=4.224;QD=11.14;ReadPosRankSum=1.909;VQSLOD=4.2175;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:8:2.84:18,3,0	1/1:5,2:4:6.02:77,6,0	0/0:24,0:1:3.01:0,3,34	0/0:35,1:6:12.04:0,12,179	./.	1/1:4,7:9:9.03:116,9,0	0/1:10,0:8:0.15:0,0,0	0/0:20,0:5:6:0,6,73	1/1:23,25:39:49.93:618,50,0	0/1:43,24:43:8.70:757,0,9	1/1:5,7:11:12.03:144,12,0	1/1:21,19:35:36.59:458,37,0	./.	./.	1/1:20,12:29:8.92:116,9,0	1/1:20,14:28:20.90:240,21,0	1/1:23,15:37:60.78:641,61,0	1/1:11,17:28:63.75:743,64,0	1/1:10,0:3:5.59:26,6,0	./.	0/0:97,0:65:3.65:0,4,14	./.	1/1:19,5:21:9.03:113,9,0	1/1:30,30:55:57.02:730,57,0	./.	1/1:23,10:25:34.47:367,34,0	1/1:4,0:3:3:26,3,0	0/1:4,4:7:29.04:104,0,29
chr10	83431158	.	CACACAT	C	151.64	PASS	AB=0.990;AC=9;AF=0.205;AN=44;BaseQRankSum=5.730;DP=716;FS=0.000;HRun=0;HaplotypeScore=156.2556;InbreedingCoeff=0.2978;MQ=30.73;MQ0=45;MQRankSum=-5.763;QD=1.11;ReadPosRankSum=-0.929;VQSLOD=1.8739;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:12:1.56:26,2,0	0/0:8,0:5:6.02:0,6,90	0/0:31,0:1:3.01:0,3,73	0/0:43,0:7:20.59:0,21,345	./.	0/0:15,0:13:8.92:0,9,135	0/0:7,0:6:1.11:0,1,2	0/0:20,0:6:8.39:0,8,137	0/0:49,0:41:51.60:0,52,703	0/0:70,0:47:41.45:0,41,1185	0/0:12,0:11:12.04:0,12,161	0/0:42,0:37:36.41:0,36,614	./.	./.	0/0:38,0:34:11.92:0,12,206	0/1:32,0:27:25.88:26,0,228	0/1:39,0:38:16.60:17,0,860	0/0:31,0:31:57.61:0,58,1040	1/1:6,2:3:6.02:126,6,0	./.	0/0:94,1:63:6.84:0,7,98	./.	0/0:27,0:23:12.03:0,12,164	0/0:63,0:58:57.19:0,57,860	./.	0/1:39,0:27:66.13:66,0,390	1/1:3,1:3:2.74:12,3,0	0/0:12,0:10:20.86:0,21,280
chr10	83431159	.	A	ACATG	41.72	PASS	AB=0.965;AC=6;AF=0.136;AN=44;BaseQRankSum=2.733;DP=705;FS=2.535;HRun=0;HaplotypeScore=150.4250;InbreedingCoeff=0.0697;MQ=30.91;MQ0=40;MQRankSum=-3.550;QD=0.28;ReadPosRankSum=-0.524;VQSLOD=2.3504;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:2.87:0,3,16	0/0:8,0:5:6.01:0,6,61	0/0:32,0:1:3.01:0,3,58	0/0:43,0:7:18.02:0,18,261	./.	0/0:15,0:13:9.02:0,9,92	0/0:7,0:6:0:0,0,0	0/0:19,0:5:8.70:0,9,115	0/0:46,3:41:30.64:0,31,490	0/1:66,1:47:58.71:59,0,919	0/0:12,0:11:12.03:0,12,133	0/0:41,1:37:45.38:0,45,476	./.	./.	0/0:36,2:35:11.64:0,12,137	0/1:29,2:26:50.40:50,0,167	0/0:37,0:37:28.81:0,29,781	0/0:31,0:31:57.38:0,57,750	0/1:7,0:3:12.72:23,0,13	./.	0/0:87,1:62:5.81:0,6,54	./.	0/0:25,0:23:12.02:0,12,120	0/0:60,2:57:57.13:0,57,584	./.	0/1:38,0:27:6.01:6,0,445	1/1:4,0:3:1.82:5,2,0	0/0:12,0:10:21.06:0,21,257
chr10	83431160	.	CACAT	C	692.42	PASS	AB=0.941;AC=10;AF=0.227;AN=44;BaseQRankSum=5.482;DP=705;FS=8.461;HRun=0;HaplotypeScore=145.6382;InbreedingCoeff=0.1892;MQ=31.05;MQ0=39;MQRankSum=-6.182;QD=4.27;ReadPosRankSum=-3.146;VQSLOD=1.1530;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,2:12:1.23:44,1,0	0/0:8,0:5:5.85:0,6,35	0/0:33,0:1:3.01:0,3,62	0/0:43,0:7:20.58:0,21,251	./.	0/0:15,0:13:8.67:0,9,52	0/0:7,0:6:0.94:0,1,2	0/0:19,0:5:8.95:0,9,125	0/0:49,1:42:3.41:0,3,209	0/0:70,0:48:31.23:0,31,492	0/0:12,0:11:10.56:0,11,51	0/0:39,2:36:25.29:0,25,248	./.	./.	0/0:39,0:35:12.68:0,13,130	0/1:32,0:26:13.94:14,0,70	0/1:35,2:37:99:146,0,249	0/1:30,1:31:78.11:78,0,364	1/1:6,0:3:6.02:67,6,0	./.	0/0:77,11:61:5.76:0,6,49	./.	0/0:25,1:23:11.81:0,12,80	0/0:61,2:58:53.94:0,54,319	./.	0/1:32,6:28:99:454,0,120	1/1:4,0:3:2.84:14,3,0	0/0:10,1:10:11.85:0,12,117
chr10	83431162	.	CAT	C	2878.62	PASS	AB=0.935;AC=29;AF=0.659;AN=44;BaseQRankSum=3.328;DP=685;FS=5.021;HRun=0;HaplotypeScore=128.7568;InbreedingCoeff=-0.0150;MQ=31.69;MQ0=35;MQRankSum=1.595;QD=5.64;ReadPosRankSum=6.855;VQSLOD=1.7634;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:12:3.48:36,3,0	1/1:7,0:4:5.86:36,6,0	0/0:33,0:1:3.01:0,3,49	0/0:45,0:8:20.58:0,21,229	./.	0/1:16,0:14:13.31:41,0,13	0/1:5,1:5:0.15:0,0,0	0/1:18,0:5:15.92:16,0,64	1/1:48,3:44:5.48:292,5,0	0/1:57,9:46:8.59:469,0,9	1/1:9,3:11:11.94:124,12,0	0/1:38,2:36:30.71:196,0,31	./.	./.	0/1:32,1:30:31.43:31,0,35	1/1:28,2:25:20.80:183,21,0	1/1:34,2:37:13.72:438,14,0	0/1:29,1:31:20.34:347,0,20	1/1:6,0:3:5.92:39,6,0	./.	0/0:78,5:60:2.38:0,2,26	./.	0/1:21,3:23:13.40:32,0,13	1/1:57,4:57:55.03:310,55,0	./.	1/1:36,1:28:52:350,52,0	1/1:2,2:3:3.01:43,3,0	0/1:12,0:10:32.41:32,0,49
chr10	83431163	.	ATATG	A	498.27	PASS	AB=0.955;AC=11;AF=0.250;AN=44;BaseQRankSum=6.914;DP=678;FS=4.773;HRun=0;HaplotypeScore=146.6789;InbreedingCoeff=0.1487;MQ=32.05;MQ0=33;MQRankSum=-5.660;QD=2.45;ReadPosRankSum=-0.470;VQSLOD=2.4693;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,1:11:1.69:36,2,0	0/0:7,0:4:6.02:0,6,84	0/0:33,0:1:3.01:0,3,81	0/0:45,0:8:21.06:0,21,349	./.	0/0:14,2:14:11.82:0,12,194	0/0:6,0:5:0.94:0,1,2	0/0:15,1:5:8.81:0,9,83	0/0:50,1:44:7.83:0,8,658	0/1:61,3:46:73.12:73,0,1099	0/0:12,0:11:11.93:0,12,118	0/0:38,3:36:22.73:0,23,655	./.	./.	0/0:29,4:29:14.60:0,15,294	0/0:29,3:26:11.61:0,12,258	0/1:31,4:36:99:197,0,744	0/1:30,1:31:14.23:14,0,974	1/1:5,0:3:6:54,6,0	./.	0/0:76,4:58:7.29:0,7,77	./.	0/0:25,2:25:15.05:0,15,288	0/0:55,8:58:56.98:0,57,812	./.	0/1:38,1:29:99:206,0,479	1/1:4,0:3:2.97:20,3,0	0/1:12,0:10:26.58:27,0,263
chr10	83431165	.	ATG	A	653.50	PASS	AB=0.976;AC=16;AF=0.364;AN=44;BaseQRankSum=6.252;DP=698;FS=12.336;HRun=0;HaplotypeScore=144.1919;InbreedingCoeff=-0.1191;MQ=32.37;MQ0=34;MQRankSum=-2.572;QD=1.84;ReadPosRankSum=2.721;VQSLOD=2.1350;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:11:3.44:22,3,0	0/1:8,0:5:1.15:1,0,6	0/0:33,0:1:3.01:0,3,60	0/0:46,0:8:19.73:0,20,236	./.	0/0:18,0:15:6.58:0,7,89	0/0:11,0:9:3.32:0,3,26	0/0:14,1:5:5.52:0,6,64	0/1:49,2:45:99:125,0,110	0/1:61,3:48:99:213,0,355	0/1:12,0:11:16.26:30,0,16	0/1:38,3:36:38.09:38,0,166	./.	./.	0/0:32,1:29:11.87:0,12,122	0/1:33,1:28:50.89:51,0,71	0/1:37,1:37:99:164,0,170	0/1:30,1:31:4.97:5,0,238	1/1:7,0:3:5.80:44,6,0	./.	0/0:77,4:59:3.17:0,3,43	./.	0/0:26,1:25:12.18:0,12,123	0/0:65,0:60:22.16:0,22,145	./.	0/1:39,0:30:62.40:62,0,107	1/1:5,0:3:3:25,3,0	0/1:13,0:11:6.12:6,0,129
chr10	83431235	.	ATG	A	115.19	PASS	AB=0.967;AC=6;AF=0.120;AN=50;BaseQRankSum=6.264;DP=1041;FS=17.130;HRun=0;HaplotypeScore=197.2652;InbreedingCoeff=0.1139;MQ=33.07;MQ0=70;MQRankSum=-4.368;QD=0.92;ReadPosRankSum=-2.868;VQSLOD=1.2598;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:16:0.47:1,0,0	0/0:19,0:16:2.45:0,2,35	./.	0/0:1,0:1:3.01:0,3,61	./.	0/0:39,0:35:4.15:0,4,293	0/0:56,0:40:13.49:0,13,297	0/0:29,0:9:18.03:0,18,221	0/0:68,1:59:94.42:0,94,1570	0/0:85,5:57:36.23:0,36,1839	0/0:19,2:18:12:0,12,192	0/0:69,1:54:64.95:0,65,1211	0/0:7,0:5:3.01:0,3,35	0/0:10,0:4:2.80:0,3,13	0/0:57,0:50:31.67:0,32,635	0/0:42,0:34:56.88:0,57,1130	0/0:52,0:50:74.67:0,75,1736	0/0:42,2:41:63.15:0,63,1650	0/0:28,0:4:8.70:0,9,124	0/0:10,0:6:3.01:0,3,40	0/0:138,3:95:8.98:0,9,52	./.	0/0:32,0:24:12.37:0,12,263	0/0:72,1:70:81.27:0,81,1526	0/1:3,0:3:0:0,0,0	0/1:72,3:53:99:151,0,1158	0/1:6,0:4:0.60:1,0,5	0/1:17,2:16:49.35:49,0,295
chr10	83431237	.	GCA	G	349.87	PASS	AB=0.924;AC=13;AF=0.283;AN=46;BaseQRankSum=7.198;DP=1023;FS=0.623;HRun=0;HaplotypeScore=192.1645;InbreedingCoeff=0.3492;MQ=33.16;MQ0=66;MQRankSum=-7.335;QD=0.94;ReadPosRankSum=-2.630;VQSLOD=2.4210;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,5:16:0:0,0,0	0/0:17,1:15:2.88:0,3,50	./.	0/0:1,0:1:3.01:0,3,39	./.	0/0:36,0:33:12.22:0,12,233	0/0:50,5:40:11.01:0,11,128	1/1:25,1:9:4.97:20,5,0	0/0:66,1:60:33.21:0,33,1265	0/0:88,2:57:69.17:0,69,1559	0/0:18,4:19:9.03:0,9,152	0/0:68,0:55:48.66:0,49,990	./.	1/1:9,0:4:2.92:17,3,0	0/0:50,1:48:35.85:0,36,577	0/0:38,0:34:30.65:0,31,985	0/1:53,0:50:1.67:2,0,1280	0/0:41,1:39:14.35:0,14,1223	0/1:25,0:4:19.84:20,0,52	./.	1/1:129,9:93:6.06:79,6,0	./.	0/0:32,0:24:15.03:0,15,226	0/0:69,0:70:75.24:0,75,1219	0/0:3,0:3:0:0,0,0	0/1:67,3:51:99:192,0,535	1/1:3,1:4:5.80:73,6,0	0/1:15,3:15:79.41:79,0,164
chr10	83431248	.	CAT	C	367.30	PASS	AB=0.906;AC=15;AF=0.300;AN=50;BaseQRankSum=7.674;DP=878;FS=0.575;HRun=0;HaplotypeScore=168.7275;InbreedingCoeff=0.3139;MQ=34.56;MQ0=40;MQRankSum=-5.149;QD=1.36;ReadPosRankSum=-4.298;VQSLOD=1.4789;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,1:11:0.47:1,0,0	0/0:13,0:12:2.75:0,3,49	./.	0/0:3,0:1:3.01:0,3,60	./.	0/0:27,0:25:16.56:0,17,224	0/0:41,1:28:7.81:0,8,75	0/0:25,0:7:3.11:0,3,8	0/0:64,1:57:37.73:0,38,1468	0/0:82,1:51:36.16:0,36,1778	0/0:21,0:18:9.03:0,9,179	0/0:64,0:54:62.46:0,62,1175	1/1:7,0:5:2.92:17,3,0	0/0:8,0:4:1.25:0,1,3	0/0:45,0:42:29.35:0,29,634	0/0:39,1:36:18.08:0,18,1089	0/0:44,2:45:25.51:0,26,1506	0/1:40,4:41:7.42:7,0,1450	0/1:19,0:4:39.29:39,0,52	1/1:12,0:5:2.96:19,3,0	1/1:102,0:66:3.84:33,4,0	./.	0/0:32,0:24:15.03:0,15,228	0/0:66,2:67:84.16:0,84,1499	0/1:1,1:2:0:0,0,0	0/1:52,3:43:99:268,0,290	1/1:4,1:5:8.32:71,8,0	0/1:11,0:9:47.10:47,0,82
chr10	83431249	.	ATG	A	704.25	PASS	AB=0.968;AC=16;AF=0.320;AN=50;BaseQRankSum=7.242;DP=855;FS=8.347;HRun=0;HaplotypeScore=164.9084;InbreedingCoeff=0.2436;MQ=34.74;MQ0=39;MQRankSum=-5.507;QD=2.70;ReadPosRankSum=-4.477;VQSLOD=0.2903;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:11:0.47:1,0,0	0/0:12,0:11:2.66:0,3,53	./.	0/0:4,0:1:3.01:0,3,61	./.	0/0:27,0:25:6.36:0,6,206	0/1:39,1:27:2.97:3,0,36	1/1:24,0:7:5.34:22,5,0	0/0:66,0:58:38.80:0,39,1488	0/1:76,2:50:40:40,0,1828	0/0:18,2:18:9.03:0,9,181	0/0:64,1:55:50.81:0,51,1240	1/1:2,5:5:3.01:35,3,0	0/0:6,2:4:2.80:0,3,13	0/0:44,0:41:29.19:0,29,620	0/0:40,0:36:30.63:0,31,1012	0/0:47,0:45:59.15:0,59,1584	0/0:44,0:41:61.30:0,61,1625	0/1:18,1:4:51.90:67,0,52	1/1:10,2:5:3.01:39,3,0	0/0:85,11:64:3.15:0,3,13	./.	0/0:28,2:22:14.53:0,15,184	0/0:66,2:67:84.27:0,84,1574	0/1:2,0:2:0:0,0,0	0/1:44,5:39:52.13:524,0,52	1/1:5,0:5:2.27:69,2,0	0/1:11,0:9:6.23:38,0,6
chr10	83431251	.	GCA	G	592.99	PASS	AB=0.913;AC=11;AF=0.229;AN=48;BaseQRankSum=3.878;DP=859;FS=1.508;HRun=0;HaplotypeScore=167.8891;InbreedingCoeff=0.1532;MQ=34.77;MQ0=40;MQRankSum=-3.177;QD=3.04;ReadPosRankSum=-0.578;VQSLOD=2.3244;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,2:11:0:0,0,0	0/0:11,0:10:2.88:0,3,52	./.	0/0:5,0:1:3.01:0,3,52	./.	0/0:26,0:25:13.74:0,14,188	0/1:37,1:26:0.05:0,0,0	1/1:23,0:6:2.74:12,3,0	0/0:63,0:57:66.29:0,66,1403	0/0:81,0:53:99:0,101,2044	0/0:21,0:19:9.02:0,9,155	0/0:68,0:58:57.24:0,57,1228	0/0:8,0:6:2.84:0,3,18	1/1:8,0:4:2.96:19,3,0	0/0:43,0:41:31.98:0,32,537	0/0:40,0:36:55.50:0,55,847	0/0:45,0:43:86.03:0,86,1355	0/0:46,0:43:94.99:0,95,1396	0/1:19,0:4:20.78:21,0,44	./.	0/0:94,1:62:5.73:0,6,91	./.	0/1:25,1:19:26.33:26,0,105	0/0:70,0:69:81.28:0,81,1397	0/0:3,0:3:0:0,0,0	0/1:39,9:39:75.28:478,0,75	0/1:6,0:6:4.34:4,0,37	0/1:7,4:9:36.82:151,0,37
chr10	83431255	.	ACACACG	A	132.69	PASS	AB=0.974;AC=9;AF=0.196;AN=46;BaseQRankSum=6.387;DP=854;FS=0.000;HRun=0;HaplotypeScore=189.9060;InbreedingCoeff=0.1248;MQ=34.94;MQ0=39;MQRankSum=-5.310;QD=0.83;ReadPosRankSum=-4.100;VQSLOD=1.7047;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,1:9:0:0,0,0	0/0:10,0:10:2.77:0,3,97	./.	0/0:6,0:1:3.01:0,3,101	./.	0/0:26,0:24:13.54:0,14,337	0/1:30,0:17:0.19:0,0,0	1/1:25,0:6:3:68,3,0	0/0:68,0:59:56.28:0,56,2623	0/0:81,0:53:99:0,115,3470	0/0:23,0:20:9.03:0,9,279	0/0:70,0:59:54.21:0,54,2178	0/1:8,0:6:7.92:43,0,8	./.	0/0:39,0:37:30.99:0,31,954	0/0:42,0:38:50.42:0,50,1425	0/0:47,0:45:84.21:0,84,2808	0/0:46,0:43:99:0,100,2509	0/1:20,0:5:38.25:38,0,78	./.	0/0:89,4:64:5.81:0,6,182	./.	0/0:27,0:20:18.04:0,18,367	0/0:70,0:69:81.28:0,81,2682	0/0:3,0:3:0:0,0,0	0/1:47,1:38:27.89:28,0,696	0/1:6,0:6:20.58:21,0,127	0/1:11,1:10:50.48:50,0,188
chr10	83431259	.	ACG	A	551.19	PASS	AB=0.994;AC=17;AF=0.354;AN=48;BaseQRankSum=6.289;DP=812;FS=2.774;HRun=0;HaplotypeScore=162.5462;InbreedingCoeff=0.2227;MQ=35.82;MQ0=32;MQRankSum=-3.844;QD=2.03;ReadPosRankSum=-4.182;VQSLOD=1.4661;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:8:0.47:1,0,0	0/0:12,0:12:8.22:0,8,86	./.	0/0:7,0:1:3.01:0,3,58	./.	0/0:24,1:23:0.82:0,1,152	1/1:20,6:16:3.42:20,3,0	1/1:18,0:4:2.92:17,3,0	0/0:62,2:56:44.06:0,44,1463	0/0:75,0:51:78.50:0,79,1996	0/0:21,0:18:9.03:0,9,151	0/0:64,1:57:40.79:0,41,1219	1/1:8,1:7:5.76:32,6,0	1/1:6,0:3:1.25:3,1,0	0/0:38,1:37:32.88:0,33,587	0/0:42,1:39:31.80:0,32,794	0/0:47,0:45:92.63:0,93,1490	0/0:43,0:40:75.57:0,76,1370	0/1:18,0:6:23.04:23,0,51	./.	0/1:90,2:66:72.66:73,0,93	./.	0/1:28,0:21:26.44:26,0,159	0/0:66,0:65:84.23:0,84,1527	0/1:3,0:3:0:0,0,0	0/1:44,1:38:27.97:405,0,28	0/1:6,0:6:3.72:4,0,37	0/1:10,0:8:1.61:80,0,2
chr10	83431293	.	ATG	A	228.72	PASS	AB=0.885;AC=4;AF=0.077;AN=52;BaseQRankSum=4.814;DP=841;FS=3.633;HRun=0;HaplotypeScore=139.0346;InbreedingCoeff=0.1570;MQ=35.96;MQ0=37;MQRankSum=-4.697;QD=5.86;ReadPosRankSum=-3.367;VQSLOD=2.4870;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:5.91:0,6,122	0/0:12,1:12:6.77:0,7,163	0/0:21,0:2:4.25:0,4,30	0/0:43,0:4:11.63:0,12,167	./.	0/0:15,1:15:21.89:0,22,362	0/0:31,0:23:2.53:0,3,46	0/0:21,0:16:42.12:0,42,781	0/0:49,0:46:84.12:0,84,1536	0/0:68,2:52:99:0,113,2283	0/0:23,2:23:14.94:0,15,260	0/0:52,1:46:60.70:0,61,1367	0/0:8,0:6:8.96:0,9,157	0/0:19,0:13:2.86:0,3,60	0/0:26,0:23:29.81:0,30,562	0/0:35,0:33:50.64:0,51,903	0/0:40,0:39:87.03:0,87,1704	0/0:34,0:33:85.33:0,85,1430	0/0:17,0:6:15.05:0,15,260	0/1:11,0:6:0:0,0,0	0/0:163,0:133:81.53:0,82,1543	./.	0/0:16,3:16:12.04:0,12,244	0/0:52,0:50:84.28:0,84,1546	0/0:8,0:6:3.01:0,3,49	0/1:11,6:13:8.54:257,0,9	0/1:7,0:6:4.76:5,0,129	0/1:3,1:4:2.84:57,0,3
chr10	83431339	.	GCA	G	624.11	PASS	AB=0.868;AC=11;AF=0.239;AN=46;BaseQRankSum=4.078;DP=912;DS;FS=1.506;HRun=0;HaplotypeScore=144.5511;InbreedingCoeff=0.1941;MQ=37.12;MQ0=58;MQRankSum=-3.129;QD=1.45;ReadPosRankSum=0.683;VQSLOD=2.7538;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,8:19:3.01:38,3,0	0/0:17,0:14:7.92:0,8,124	./.	./.	./.	0/0:20,0:19:33.11:0,33,534	0/1:18,11:23:58.52:59,0,156	0/0:17,0:5:6.02:0,6,100	0/0:52,1:51:58.10:0,58,1452	0/0:84,0:62:99:0,133,1931	0/0:14,0:13:12.04:0,12,199	0/0:49,1:42:74.74:0,75,1208	0/1:10,1:9:0:0,0,0	./.	0/0:30,0:26:43.94:0,44,695	0/0:34,0:29:45.12:0,45,694	0/1:36,3:37:34.79:35,0,1151	0/0:33,0:33:68.48:0,68,1047	0/1:26,1:8:35.01:111,0,35	0/1:9,4:8:0:0,0,0	0/1:189,46:174:99:451,0,549	./.	0/0:24,0:20:17.41:0,17,273	0/1:44,3:43:4.07:4,0,947	0/0:13,0:11:3.81:0,4,19	0/0:38,0:26:15.08:0,15,663	1/1:5,2:6:5.69:49,6,0	0/0:11,0:9:13.83:0,14,249
chr10	83431388	.	CGT	C	546.92	PASS	AB=0.952;AC=18;AF=0.409;AN=44;BaseQRankSum=6.004;DP=653;DS;FS=5.464;HRun=0;HaplotypeScore=91.3930;InbreedingCoeff=0.0634;MQ=40.84;MQ0=36;MQRankSum=-2.396;QD=1.48;ReadPosRankSum=-3.812;VQSLOD=0.2072;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:7:3.01:30,3,0	0/0:15,2:16:10.71:0,11,189	0/0:25,0:2:5.51:0,6,59	0/0:43,0:6:16.15:0,16,128	./.	0/1:19,1:19:43.68:44,0,302	1/1:9,0:5:3.01:46,3,0	./.	0/1:59,1:58:0.85:1,0,1396	0/1:78,3:69:71.49:71,0,1881	0/1:11,1:10:15.94:16,0,82	0/0:44,0:39:54.43:0,54,1202	1/1:4,0:4:3.01:37,3,0	./.	0/0:27,0:27:45.90:0,46,804	0/0:30,0:27:2.12:0,2,598	0/1:33,2:33:20.24:20,0,1083	0/1:33,3:34:67.36:67,0,1209	./.	0/0:5,0:4:0:0,0,0	1/1:57,11:47:14.97:169,15,0	./.	0/0:28,1:24:15.11:0,15,358	0/0:39,2:41:87.16:0,87,1395	1/1:2,5:6:2.94:18,3,0	0/1:21,2:14:99:101,0,110	./.	0/1:6,0:4:22.17:66,0,22
chr10	83431389	.	GTA	G	60.25	PASS	AB=1.000;AC=11;AF=0.250;AN=44;BaseQRankSum=5.778;DP=640;DS;FS=1.282;HRun=0;HaplotypeScore=91.6416;InbreedingCoeff=0.4259;MQ=40.74;MQ0=36;MQRankSum=-1.663;QD=0.49;ReadPosRankSum=-3.755;VQSLOD=0.2315;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,4:7:3.01:38,3,0	0/0:17,0:16:13.33:0,13,213	0/0:25,0:2:6.02:0,6,96	0/0:43,0:6:10.94:0,11,155	./.	0/0:20,0:19:5.81:0,6,349	1/1:5,0:5:2.98:21,3,0	./.	0/0:55,1:54:23.03:0,23,1424	0/0:79,2:69:18.12:0,18,2150	0/0:10,1:9:6.02:0,6,113	0/0:44,0:39:29.78:0,30,1196	1/1:4,0:4:3.37:16,3,0	./.	0/0:25,0:25:32.10:0,32,834	0/0:30,0:27:31.67:0,32,672	0/0:32,1:33:22.46:0,22,1145	0/0:36,0:34:1.32:0,1,1128	./.	0/0:2,3:4:0:0,0,0	1/1:54,11:44:6.55:54,7,0	./.	0/0:29,0:24:23.84:0,24,427	0/0:39,0:39:57.29:0,57,1434	0/1:7,0:6:0:0,0,0	0/1:24,0:14:30.14:30,0,178	./.	0/1:6,0:4:25.24:25,0,36
chr10	83431427	.	G	GCA	106.26	PASS	AB=0.747;AC=5;AF=0.100;AN=50;BaseQRankSum=3.375;DP=801;FS=0.000;HRun=0;HaplotypeScore=101.9801;InbreedingCoeff=0.3444;MQ=38.42;MQ0=54;MQRankSum=-1.679;QD=0.78;ReadPosRankSum=0.090;VQSLOD=1.6217;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,6:10:0:0,0,0	0/0:18,0:16:6.25:0,6,236	0/0:42,0:3:6.01:0,6,64	0/0:54,0:11:24.07:0,24,293	./.	0/0:16,0:15:23.86:0,24,279	0/0:20,4:13:3.01:0,3,38	0/0:8,0:1:3.01:0,3,38	0/0:52,0:49:99:0,105,1298	0/0:84,0:78:99:0,162,1907	0/0:13,0:11:5.97:0,6,58	0/0:45,0:41:91.22:0,91,1073	0/1:7,1:6:13.42:13,0,31	./.	0/0:33,0:35:63.16:0,63,781	0/0:27,0:20:48.12:0,48,574	0/0:27,0:26:69.18:0,69,825	0/0:27,0:27:41.93:0,42,571	0/0:14,1:1:3.01:0,3,38	0/0:9,1:6:0:0,0,0	0/1:62,52:78:0.16:140,0,0	./.	0/0:26,0:22:17.07:0,17,176	0/0:49,0:48:93.29:0,93,1171	0/0:9,0:7:3.01:0,3,38	0/0:46,1:34:18.20:0,18,703	1/1:1,1:1:3.01:50,3,0	0/0:14,0:10:24.07:0,24,301
chr10	83431479	.	GCA	G	65.90	PASS	AB=0.870;AC=9;AF=0.225;AN=40;BaseQRankSum=6.689;DP=791;FS=2.019;HRun=0;HaplotypeScore=116.3669;InbreedingCoeff=0.2805;MQ=40.86;MQ0=52;MQRankSum=-5.711;QD=0.31;ReadPosRankSum=-2.370;VQSLOD=2.0790;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:14,0:12:18.03:0,18,274	0/0:26,0:2:3.01:0,3,50	./.	./.	0/0:20,1:19:36.12:0,36,607	1/1:18,10:18:1.25:3,1,0	./.	0/0:52,0:51:97.24:0,97,1661	0/0:67,0:53:99:0,100,1689	0/0:20,0:17:24.08:0,24,382	0/0:53,0:47:87.52:0,88,1646	0/1:11,8:16:21.07:68,0,21	1/1:9,7:13:0.88:2,1,0	0/0:39,1:41:54.69:0,55,1434	0/0:29,0:25:52.10:0,52,985	0/0:31,0:28:52.50:0,53,1031	0/0:24,0:23:36.90:0,37,763	0/1:22,1:2:19.29:33,0,19	./.	1/1:64,11:57:2.92:24,3,0	./.	0/0:25,0:21:27.07:0,27,412	0/0:55,0:54:99:0,114,1923	./.	0/1:52,2:44:43.63:44,0,1234	./.	0/0:14,0:11:21.07:0,21,354
chr10	83431509	.	G	GCA	89.28	PASS	AB=0.903;AC=5;AF=0.100;AN=50;BaseQRankSum=6.490;DP=727;FS=19.924;HRun=0;HaplotypeScore=130.3415;InbreedingCoeff=0.0751;MQ=42.20;MQ0=34;MQRankSum=-4.970;QD=0.93;ReadPosRankSum=-0.263;VQSLOD=1.3301;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:12,0:11:2.84:0,3,39	0/0:20,0:2:3.01:0,3,39	0/0:20,0:3:9.03:0,9,118	./.	0/0:17,1:16:39.13:0,39,507	0/0:23,1:13:2.99:0,3,39	0/0:18,0:7:3.01:0,3,39	0/0:59,0:59:99:0,117,1479	0/0:53,0:46:99:0,114,1421	0/0:19,0:17:36.12:0,36,473	0/0:55,0:50:99:0,104,1299	0/1:17,3:17:41.61:54,0,42	0/0:11,8:17:5.05:0,5,77	0/0:33,0:31:72.04:0,72,912	0/0:26,1:26:16.14:0,16,654	0/1:34,2:33:15.99:16,0,937	0/1:22,3:24:73.97:74,0,627	1/1:14,1:2:2.35:50,2,0	0/0:12,1:11:3.01:0,3,40	0/0:54,9:49:2.99:0,3,40	./.	0/0:19,0:18:30.10:0,30,394	0/0:47,1:47:99:0,114,1481	0/0:10,1:9:3.01:0,3,39	0/0:57,0:46:46.44:0,46,1170	0/0:8,1:7:0:0,0,0	0/0:7,0:7:11.95:0,12,119
chr10	83431543	.	GCT	G	315.36	PASS	AB=0.887;AC=7;AF=0.140;AN=50;BaseQRankSum=5.385;DP=743;FS=0.000;HRun=0;HaplotypeScore=123.0286;InbreedingCoeff=0.0636;MQ=41.88;MQ0=35;MQRankSum=-5.911;QD=2.01;ReadPosRankSum=-2.826;VQSLOD=0.9353;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:6:6.02:0,6,103	0/0:51,0:1:3.01:0,3,58	0/0:39,0:6:8.98:0,9,115	./.	0/0:19,0:18:35.78:0,36,685	0/0:24,1:14:2.74:0,3,25	0/1:11,5:4:21.53:36,0,22	0/0:54,3:57:88.13:0,88,2281	0/0:57,3:52:61.32:0,61,2114	0/0:16,1:16:26.95:0,27,491	0/0:52,2:50:99:0,120,1969	0/1:15,1:14:11.65:12,0,22	0/0:14,4:16:4.89:0,5,50	0/0:31,0:29:52.99:0,53,1137	0/0:28,0:28:66.02:0,66,1018	0/0:30,4:32:11.61:0,12,1389	0/1:20,4:22:65.02:65,0,922	0/0:4,0:1:2.74:0,3,12	0/0:14,0:10:2.99:0,3,26	1/1:16,15:35:2.77:46,3,0	./.	0/0:17,0:16:30.08:0,30,538	0/0:53,2:54:99:0,118,2500	0/0:10,2:9:3:0,3,25	0/1:39,3:38:99:269,0,495	0/1:14,1:12:0.01:0,0,0	0/0:15,0:13:17.46:0,17,177
chr10	83431557	.	G	GCA	60.59	PASS	AB=0.818;AC=6;AF=0.120;AN=50;BaseQRankSum=5.662;DP=788;FS=8.628;HRun=0;HaplotypeScore=130.7065;InbreedingCoeff=0.3097;MQ=41.67;MQ0=43;MQRankSum=-2.088;QD=0.93;ReadPosRankSum=-1.025;VQSLOD=1.8701;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:9,0:8:9.03:0,9,108	0/0:49,0:2:3.90:0,4,38	0/0:48,0:8:7.30:0,7,102	./.	0/0:18,0:17:24.07:0,24,294	0/0:22,3:13:2.88:0,3,38	0/0:11,1:3:3.01:0,3,39	0/0:62,0:62:99:0,133,1686	0/0:64,0:55:99:0,120,1606	0/0:16,0:14:30.08:0,30,362	0/0:57,0:54:94.30:0,94,1364	0/1:14,3:13:19.43:62,0,19	0/1:16,6:18:0.06:78,0,0	0/0:29,0:26:63.59:0,64,776	0/0:28,0:28:60.19:0,60,762	0/0:39,0:38:61.56:0,62,878	0/0:26,0:23:53.58:0,54,727	0/0:10,0:1:3.01:0,3,37	0/0:12,0:8:2.99:0,3,38	0/0:56,0:47:3.95:0,4,40	./.	0/0:22,0:21:39.08:0,39,471	0/0:60,0:59:99:0,126,1599	1/1:10,2:8:2.94:18,3,0	0/0:34,0:30:28.68:0,29,474	1/1:13,1:11:0.45:1,0,0	0/0:15,0:13:17.67:0,18,182
chr10	83431567	.	ATG	A	34.17	PASS	AB=0.986;AC=5;AF=0.100;AN=50;BaseQRankSum=5.770;DP=787;FS=15.285;HRun=0;HaplotypeScore=120.3218;InbreedingCoeff=0.0559;MQ=41.43;MQ0=54;MQRankSum=-2.263;QD=0.43;ReadPosRankSum=-3.111;VQSLOD=0.8126;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:10,0:8:8.96:0,9,157	0/0:50,0:2:6:0,6,58	0/0:48,1:7:14.78:0,15,242	./.	0/0:15,0:14:23.84:0,24,512	0/0:23,0:12:2.28:0,2,37	0/0:13,0:3:3.01:0,3,57	0/0:60,1:61:99:0,139,2699	0/0:58,3:53:29.70:0,30,2444	0/0:15,2:15:2.34:0,2,444	0/0:54,1:52:99:0,119,2305	0/1:15,0:11:11.78:12,0,53	0/1:22,1:19:30.82:31,0,40	0/0:34,0:31:75.79:0,76,1300	0/0:31,0:28:71.05:0,71,1319	0/0:35,0:34:91.79:0,92,1606	0/0:28,0:25:40.89:0,41,1150	0/0:15,0:1:3.01:0,3,41	0/0:12,2:10:2.99:0,3,36	0/0:55,4:45:2.72:0,3,47	./.	0/0:20,0:20:45.11:0,45,774	0/0:59,2:60:99:0,141,2685	1/1:7,6:8:3.01:36,3,0	0/1:28,0:24:60.22:60,0,451	0/0:12,2:11:2.02:0,2,6	0/0:14,1:13:5.44:0,5,230
chr10	83431569	.	G	GCA	71.46	PASS	AB=1.000;AC=14;AF=0.292;AN=48;BaseQRankSum=5.863;DP=791;FS=10.921;HRun=0;HaplotypeScore=124.4539;InbreedingCoeff=0.4595;MQ=41.25;MQ0=54;MQRankSum=-1.967;QD=0.38;ReadPosRankSum=-2.701;VQSLOD=1.1811;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:10,0:8:8.67:0,9,114	0/0:51,0:3:3.01:0,3,34	0/0:50,0:7:11.69:0,12,148	./.	0/0:16,0:15:27.08:0,27,339	1/1:21,2:12:0.47:1,0,0	./.	0/0:58,0:58:99:0,120,1518	0/0:59,1:53:99:0,123,1392	0/0:17,0:16:9.50:0,10,177	0/0:53,0:50:89.17:0,89,1358	0/1:16,0:12:23.08:35,0,23	0/0:22,0:19:0.58:0,1,24	0/0:34,0:30:63.61:0,64,786	0/0:31,0:28:63.46:0,63,777	0/0:37,0:36:37.63:0,38,816	0/0:28,0:25:57.14:0,57,689	1/1:14,1:1:3.01:41,3,0	1/1:11,3:10:3.01:46,3,0	1/1:62,1:48:1.86:33,2,0	./.	0/0:21,0:21:33.10:0,33,415	0/0:61,0:60:99:0,117,1463	1/1:13,0:8:1.82:5,2,0	0/1:28,0:24:1.52:2,0,162	1/1:11,3:11:2.99:34,3,0	0/0:15,0:13:10.83:0,11,126
chr10	83431579	.	ACG	A	131.22	PASS	AB=1.000;AC=15;AF=0.313;AN=48;BaseQRankSum=7.526;DP=776;FS=33.438;HRun=0;HaplotypeScore=116.6055;InbreedingCoeff=0.5349;MQ=41.78;MQ0=46;MQRankSum=-4.092;QD=0.69;ReadPosRankSum=-3.090;VQSLOD=-0.1852;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:9,0:8:8.30:0,8,170	0/0:53,0:4:11.11:0,11,78	0/0:56,0:7:14.84:0,15,221	./.	0/0:14,0:14:32.94:0,33,585	0/1:20,0:10:0.52:1,0,1	./.	0/0:60,0:60:99:0,135,2215	0/0:63,0:55:36.68:0,37,1779	0/0:16,0:15:4.21:0,4,235	0/0:55,0:54:99:0,104,1995	0/0:15,0:10:8.75:0,9,112	0/1:21,0:19:5.16:10,0,5	0/0:32,0:29:80.88:0,81,1341	0/0:33,0:30:47.12:0,47,1194	0/0:37,0:36:87.55:0,88,1414	0/0:29,0:25:63.95:0,64,979	1/1:12,0:1:0.47:1,0,0	1/1:12,0:8:2.99:23,3,0	1/1:56,3:45:0.79:2,1,0	./.	0/0:16,0:16:35.91:0,36,635	0/0:62,0:60:99:0,120,2192	1/1:13,0:9:3:25,3,0	0/1:26,0:24:78.34:97,0,78	1/1:13,0:10:2.96:19,3,0	1/1:14,1:12:15.67:87,16,0
chr10	83431605	.	ATG	A	40.13	PASS	AB=0.893;AC=13;AF=0.283;AN=46;BaseQRankSum=6.877;DP=665;FS=8.325;HRun=0;HaplotypeScore=102.7621;InbreedingCoeff=0.2714;MQ=43.44;MQ0=32;MQRankSum=-5.981;QD=0.28;ReadPosRankSum=-4.558;VQSLOD=-0.0993;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	./.	0/1:13,1:13:2.83:3,0,208	0/0:44,0:7:21.07:0,21,379	0/0:44,0:4:12.04:0,12,212	./.	0/0:14,0:14:35.79:0,36,660	1/1:6,2:6:0.89:2,1,0	0/0:12,0:4:5.79:0,6,98	0/0:55,0:55:99:0,135,2653	0/0:54,1:48:99:0,100,2291	0/0:9,1:10:20.86:0,21,344	0/0:42,0:42:99:0,119,2172	0/1:10,1:7:7.02:7,0,37	1/1:10,3:13:0.94:2,1,0	0/0:33,0:31:81.73:0,82,1519	0/0:30,0:28:75.23:0,75,1371	0/0:31,0:31:72.15:0,72,1502	0/0:32,0:29:55.29:0,55,1386	./.	0/1:8,2:7:0:0,0,0	1/1:47,2:35:0.35:2,0,0	./.	0/0:16,1:17:39.13:0,39,780	0/0:64,1:62:99:0,135,2619	./.	0/1:24,1:20:67.11:67,0,151	1/1:3,1:3:1.25:3,1,0	0/1:7,2:7:53.88:54,0,73
chr10	83431613	.	ATG	A	76.26	PASS	AB=0.905;AC=9;AF=0.196;AN=46;BaseQRankSum=7.172;DP=699;FS=4.776;HRun=0;HaplotypeScore=111.2451;InbreedingCoeff=0.3471;MQ=43.17;MQ0=45;MQRankSum=-4.010;QD=0.48;ReadPosRankSum=-5.036;VQSLOD=0.3977;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	./.	0/0:14,1:13:13.36:0,13,294	0/0:26,4:7:18.06:0,18,284	0/1:30,2:4:15.57:16,0,127	0/0:6,0:6:2.60:0,3,10	0/0:14,0:13:21.62:0,22,594	0/0:21,2:17:3.40:0,3,63	0/0:11,0:4:12.04:0,12,219	0/0:54,0:54:99:0,129,2361	0/0:52,3:48:73.19:0,73,2266	0/0:9,1:9:18.06:0,18,362	0/0:46,0:46:99:0,122,2255	0/1:10,2:6:30.80:31,0,53	1/1:14,1:15:4.50:15,4,0	0/0:36,0:32:81.25:0,81,1506	0/0:29,0:27:57.05:0,57,1159	0/0:34,0:34:82.77:0,83,1809	0/0:31,0:30:77.56:0,78,1441	./.	./.	1/1:56,5:41:3.44:23,3,0	./.	0/0:17,1:18:36.59:0,37,716	0/0:65,0:62:99:0,126,2443	./.	0/1:28,3:24:95.63:96,0,293	1/1:5,0:4:3.44:21,3,0	0/0:8,1:7:8.96:0,9,96
chr10	83431615	.	GCA	G	221.05	PASS	AB=0.862;AC=8;AF=0.174;AN=46;BaseQRankSum=5.118;DP=712;FS=2.611;HRun=0;HaplotypeScore=116.3931;InbreedingCoeff=0.3310;MQ=42.84;MQ0=48;MQRankSum=-5.171;QD=1.75;ReadPosRankSum=-4.185;VQSLOD=1.1568;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:14,1:13:20.94:0,21,317	0/0:28,0:7:3.01:0,3,30	0/0:30,0:4:2.48:0,2,50	1/1:4,2:6:3.01:39,3,0	0/0:14,0:13:30.10:0,30,491	0/0:21,1:17:8.86:0,9,89	0/0:9,0:4:9.50:0,10,145	0/0:56,0:55:99:0,125,1946	0/0:53,0:45:99:0,113,1789	0/0:13,0:12:24.07:0,24,366	0/0:45,0:45:99:0,110,1820	0/1:13,3:10:42.11:68,0,42	0/0:11,3:14:2.49:0,2,6	0/0:39,0:35:78.17:0,78,1280	0/0:29,0:27:60.21:0,60,1014	0/0:36,0:36:96.28:0,96,1554	0/0:30,0:27:66.21:0,66,1091	./.	./.	1/1:48,11:41:0.06:1,0,0	./.	0/0:19,0:19:39.12:0,39,629	0/0:66,0:62:99:0,110,1747	./.	0/1:27,5:27:99:183,0,339	1/1:3,1:4:2.81:39,3,0	0/0:4,3:7:6.01:0,6,65
chr10	83431644	.	CAT	C	48.79	PASS	AB=0.987;AC=5;AF=0.096;AN=52;BaseQRankSum=4.619;DP=924;FS=2.106;HRun=0;HaplotypeScore=150.2350;InbreedingCoeff=0.2094;MQ=40.54;MQ0=88;MQRankSum=-4.083;QD=0.80;ReadPosRankSum=-3.075;VQSLOD=2.0296;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:21,0:17:18.99:0,19,349	0/0:9,0:1:2.80:0,3,13	0/0:15,0:2:6.02:0,6,122	0/0:9,1:10:9.01:0,9,146	0/0:14,0:12:31.13:0,31,524	0/0:35,1:23:3.80:0,4,247	0/1:23,1:10:12.32:87,0,12	0/0:58,0:57:99:0,142,2618	0/0:64,0:50:88.60:0,89,1935	0/0:14,1:13:27.07:0,27,442	0/0:56,0:55:99:0,138,2554	0/0:24,0:18:24.68:0,25,387	0/0:31,1:27:17.97:0,18,258	0/0:46,0:41:88.45:0,88,1643	0/0:33,0:30:71.77:0,72,1278	0/0:43,0:39:87.23:0,87,1783	0/0:42,0:38:99:0,111,1923	0/0:24,0:1:2.99:0,3,23	./.	0/0:119,1:85:45.61:0,46,711	0/0:16,2:15:6.01:0,6,86	0/0:22,0:20:11.07:0,11,439	0/0:62,0:54:99:0,104,1838	0/1:16,0:11:0.02:0,0,97	0/0:64,0:46:25.85:0,26,1710	1/1:7,1:7:5.82:51,6,0	0/1:13,0:12:9.86:10,0,314
chr10	83431645	.	ATG	A	153.62	PASS	AB=0.869;AC=7;AF=0.130;AN=54;BaseQRankSum=5.935;DP=927;FS=0.000;HRun=0;HaplotypeScore=149.8236;InbreedingCoeff=0.1899;MQ=40.48;MQ0=88;MQRankSum=-5.547;QD=1.05;ReadPosRankSum=-4.533;VQSLOD=0.8848;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:19,1:16:16.83:0,17,352	0/0:9,0:1:3:0,3,29	0/0:15,1:2:6.02:0,6,122	0/0:11,0:11:12.04:0,12,221	0/0:14,0:12:31.80:0,32,532	0/0:33,3:23:15.48:0,15,331	1/1:17,7:10:7.31:134,7,0	0/0:60,0:57:99:0,148,2749	0/0:61,2:49:45.87:0,46,1908	0/0:15,0:13:27.06:0,27,431	0/0:58,0:57:99:0,127,2576	0/0:25,0:19:24.33:0,24,415	0/0:34,0:29:19.01:0,19,317	0/0:48,0:43:95.59:0,96,1692	0/0:31,0:28:66.20:0,66,1255	0/0:41,0:38:85.24:0,85,1774	0/0:42,0:39:99:0,114,2047	0/0:25,0:2:5.98:0,6,68	0/1:11,5:9:0:0,0,0	0/0:117,1:83:36.85:0,37,813	0/0:16,2:15:6.02:0,6,111	0/1:21,0:19:6.89:7,0,370	0/0:59,0:51:91.73:0,92,1797	0/0:14,2:11:8.52:0,9,116	0/1:59,5:46:56.48:56,0,1726	0/1:7,1:7:13.89:44,0,14	0/1:9,4:12:29.63:30,0,299
chr10	83431659	.	G	GCA	2601.25	PASS	AB=0.789;AC=8;AF=0.143;AN=56;BaseQRankSum=5.253;DP=1029;FS=40.596;HRun=0;HaplotypeScore=160.8353;InbreedingCoeff=0.1014;MQ=40.84;MQ0=83;MQRankSum=-4.460;QD=7.39;ReadPosRankSum=-2.116;VQSLOD=1.4467;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:22:5.92:0,6,76	0/0:21,0:18:18.38:0,18,209	0/0:11,0:1:3.01:0,3,38	0/0:14,0:2:6.02:0,6,71	0/0:14,0:13:12.04:0,12,153	0/0:15,0:13:20.55:0,21,209	0/1:28,16:29:46.22:337,0,46	0/1:30,0:15:27.65:28,0,228	0/0:67,0:64:99:0,139,1658	0/0:69,0:57:99:0,116,1398	0/0:14,0:12:17.42:0,17,198	0/0:53,0:52:99:0,104,1429	0/0:29,0:23:33.94:0,34,407	0/0:38,0:32:9.85:0,10,204	0/0:51,0:46:89.92:0,90,1078	0/0:27,0:26:51.15:0,51,635	0/0:40,0:38:46.06:0,46,928	0/0:42,1:40:40.51:0,41,1150	0/1:30,1:5:41.20:41,0,44	0/0:12,7:13:0:0,0,0	1/1:90,55:107:56.05:952,56,0	0/0:27,0:24:9.03:0,9,115	0/0:22,0:20:24.06:0,24,291	0/0:54,0:47:80.76:0,81,1016	0/0:18,0:15:9.03:0,9,113	0/1:48,21:52:99:986,0,257	0/1:3,9:11:19.06:185,0,19	0/1:11,9:19:99:211,0,110
chr10	83431737	.	ACACACATG	A	2063.37	PASS	AB=0.821;AC=6;AF=0.107;AN=56;BaseQRankSum=8.048;DP=817;FS=38.746;HRun=0;HaplotypeScore=182.7452;InbreedingCoeff=0.3770;MQ=44.21;MQ0=13;MQRankSum=-7.217;QD=28.66;ReadPosRankSum=-0.195;VQSLOD=1.7322;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:20:3.29:0,3,81	0/0:13,0:12:33.11:0,33,1095	0/0:47,0:14:24.08:0,24,584	0/0:55,0:14:30.09:0,30,809	0/0:11,0:9:2.98:0,3,21	0/0:25,0:25:69.01:0,69,2424	0/0:21,0:16:6:0,6,92	0/1:11,0:9:99:126,0,213	0/0:51,0:49:99:0,114,4473	0/0:58,0:56:99:0,144,5124	0/0:13,0:13:27.09:0,27,1060	0/0:47,0:46:99:0,106,3623	0/0:15,0:10:11.64:0,12,160	0/0:24,0:20:16.97:0,17,215	0/0:29,0:29:75.24:0,75,2607	0/0:26,0:26:69.22:0,69,2508	0/0:39,0:35:27.66:0,28,3252	0/0:35,0:34:93.26:0,93,3261	0/0:14,0:13:17.40:0,17,268	1/1:12,0:10:0.47:1,0,0	0/0:89,0:83:25.45:0,25,384	0/0:23,0:20:5.89:0,6,84	0/0:12,0:11:27.09:0,27,944	0/0:44,0:40:90.31:0,90,3409	0/0:10,0:9:1.25:0,1,3	0/1:16,20:30:99:1442,0,164	0/0:19,0:18:23.21:0,23,206	1/1:5,8:13:27.59:608,28,0
chr10	83431743	.	ATG	A	432.91	PASS	AB=0.908;AC=5;AF=0.089;AN=56;BaseQRankSum=9.268;DP=767;FS=26.824;HRun=0;HaplotypeScore=119.5415;InbreedingCoeff=0.3448;MQ=44.19;MQ0=16;MQRankSum=-6.869;QD=6.66;ReadPosRankSum=-0.102;VQSLOD=1.0642;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,1:17:6.34:0,6,92	0/0:14,0:13:35.99:0,36,670	0/0:50,0:10:26.99:0,27,407	0/0:50,0:10:29.97:0,30,532	0/0:8,0:7:2.99:0,3,37	0/0:25,0:25:60.99:0,61,1300	0/0:14,1:11:5.83:0,6,84	0/1:8,3:9:32.38:32,0,287	0/0:49,2:51:99:0,105,2492	0/0:55,0:53:99:0,141,2798	0/0:12,0:12:27.09:0,27,549	0/0:46,0:45:99:0,108,1988	0/0:14,0:10:11.94:0,12,149	0/0:18,0:14:18.42:0,18,260	0/0:31,0:31:84.27:0,84,1574	0/0:26,0:26:69.22:0,69,1239	0/0:38,0:38:71.64:0,72,1798	0/0:36,0:35:81.61:0,82,1812	0/0:14,0:11:21.03:0,21,266	0/1:12,0:10:0:0,0,0	0/0:75,3:72:30.22:0,30,430	0/0:18,2:17:6.02:0,6,96	0/0:11,0:10:27.09:0,27,499	0/0:41,0:39:96.31:0,96,1885	0/0:10,0:9:3.01:0,3,40	0/1:28,2:25:88.78:358,0,89	0/0:17,1:17:26.93:0,27,262	1/1:10,1:11:25.14:156,25,0
chr10	83431745	.	G	GCACA	2330.65	PASS	AB=0.891;AC=24;AF=0.429;AN=56;BaseQRankSum=11.260;DP=782;FS=62.449;HRun=0;HaplotypeScore=134.3517;InbreedingCoeff=0.7661;MQ=43.21;MQ0=16;MQRankSum=-7.294;QD=8.24;ReadPosRankSum=-1.406;VQSLOD=0.5287;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,5:17:5.93:97,6,0	0/0:15,0:14:33.04:0,33,506	0/0:51,0:8:20.94:0,21,336	0/0:50,0:10:24.08:0,24,374	1/1:3,0:6:3.01:47,3,0	0/0:25,0:25:66.23:0,66,1166	0/1:13,5:13:0:0,0,0	1/1:13,0:11:21.07:403,21,0	0/0:50,0:50:99:0,109,2021	0/0:55,0:52:99:0,120,2039	0/0:12,0:12:27.09:0,27,485	0/0:47,0:46:99:0,105,1724	1/1:7,0:9:5.99:57,6,0	1/1:13,0:15:11.99:111,12,0	0/0:29,0:29:72.16:0,72,1160	0/0:26,0:26:63.19:0,63,1068	0/0:39,0:37:61.95:0,62,1482	0/0:35,0:34:81.84:0,82,1590	1/1:10,3:9:15.04:292,15,0	0/0:4,8:10:0.47:0,0,1	1/1:79,0:76:17.30:207,17,0	1/1:12,0:16:3:26,3,0	0/0:11,0:10:18.06:0,18,309	0/0:42,0:38:90.03:0,90,1537	1/1:7,0:11:3:26,3,0	0/1:32,0:25:14.54:499,0,15	1/1:13,8:20:24.01:548,24,0	1/1:10,0:10:20.79:216,21,0
chr10	83431747	.	ACACACTCG	A	1417.11	PASS	AB=0.960;AC=21;AF=0.375;AN=56;BaseQRankSum=10.832;DP=789;FS=50.471;HRun=0;HaplotypeScore=169.1199;InbreedingCoeff=0.3841;MQ=43.01;MQ0=17;MQRankSum=-7.884;QD=4.76;ReadPosRankSum=-1.427;VQSLOD=0.5379;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:16:5.92:76,6,0	0/0:15,0:14:33.04:0,33,1051	0/0:50,0:8:19.30:0,19,341	0/0:51,0:10:23.78:0,24,380	1/1:10,0:9:2.60:10,3,0	0/0:24,0:24:65.99:0,66,2251	0/1:17,0:13:0.01:0,0,0	0/1:13,0:12:66.59:215,0,67	0/0:50,0:50:99:0,112,3720	0/0:55,0:52:99:0,132,4201	0/0:13,0:13:30.10:0,30,1192	0/0:47,0:46:99:0,107,3616	1/1:13,0:9:5.50:57,5,0	1/1:16,3:14:9.33:97,9,0	0/0:29,0:29:72.16:0,72,2241	0/0:27,0:26:63.19:0,63,2277	0/0:42,0:40:55.30:0,55,3365	0/0:35,0:34:76.04:0,76,3230	0/1:14,0:9:20.12:83,0,20	1/1:13,0:12:0.47:1,0,0	0/1:78,3:74:6.91:144,0,7	1/1:19,2:17:3:26,3,0	0/0:11,0:10:18.06:0,18,607	0/0:42,0:38:93.21:0,93,3229	1/1:11,0:10:3.01:30,3,0	0/1:31,0:26:75.18:483,0,75	0/1:19,0:19:6.67:146,0,7	0/1:10,0:10:7.53:214,0,8
chr10	83431754	.	C	CAT	104.94	PASS	AB=0.997;AC=16;AF=0.286;AN=56;BaseQRankSum=7.674;DP=788;FS=10.974;HRun=0;HaplotypeScore=122.6595;InbreedingCoeff=0.4971;MQ=42.94;MQ0=20;MQRankSum=-3.108;QD=0.50;ReadPosRankSum=-1.524;VQSLOD=1.5964;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:16:2.57:22,3,0	0/0:15,0:14:27.09:0,27,433	0/0:54,0:8:20.94:0,21,251	0/0:50,0:9:26.96:0,27,335	1/1:10,0:9:2.96:19,3,0	0/0:25,1:26:72.23:0,72,1134	0/1:17,0:13:0:0,0,0	0/0:14,0:12:7.63:0,8,96	0/0:53,1:53:90.06:0,90,1888	0/0:57,1:53:99:0,135,2056	0/0:14,0:14:33.11:0,33,536	0/0:49,0:48:99:0,113,1706	1/1:9,0:6:2.84:20,3,0	1/1:18,0:13:4.22:50,4,0	0/0:28,2:30:69.21:0,69,1070	0/0:29,0:28:63.21:0,63,1012	0/0:42,1:41:31.53:0,32,1556	0/0:34,0:33:85.76:0,86,1460	0/1:11,0:6:6.76:8,0,7	0/0:12,0:12:0:0,0,0	0/1:77,1:65:77.87:78,0,181	1/1:17,0:13:2.37:8,2,0	0/0:7,0:6:18.06:0,18,287	0/0:39,2:38:93.14:0,93,1456	1/1:11,0:10:2.92:17,3,0	0/0:33,0:29:37.26:0,37,657	0/1:20,0:19:14.33:28,0,14	0/0:12,0:11:19.23:0,19,314
chr10	83431755	.	G	GCA	173.57	PASS	AB=0.877;AC=10;AF=0.192;AN=52;BaseQRankSum=5.768;DP=790;FS=6.092;HRun=0;HaplotypeScore=124.5828;InbreedingCoeff=0.5681;MQ=42.43;MQ0=24;MQRankSum=-0.442;QD=0.96;ReadPosRankSum=-3.943;VQSLOD=0.2765;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:14:2.99:24,3,0	0/0:14,0:13:24.07:0,24,304	0/0:52,0:7:5.18:0,5,88	0/0:49,0:9:15.04:0,15,163	1/1:9,2:10:2.90:16,3,0	0/0:26,0:26:54.17:0,54,681	0/1:17,0:12:0:0,0,0	0/0:15,0:13:17.24:0,17,146	0/0:53,0:51:93.64:0,94,1172	0/0:57,0:52:99:0,101,1397	0/0:14,0:14:30.10:0,30,381	0/0:48,0:47:98.50:0,98,1192	0/1:6,5:8:0.24:0,0,0	0/1:18,5:18:0:1,0,0	0/0:29,0:28:66.11:0,66,765	0/0:28,0:27:51.16:0,51,648	0/0:42,0:40:88.24:0,88,1155	0/0:35,0:33:83.61:0,84,990	0/0:12,0:6:0.43:0,0,46	0/0:12,0:12:0:0,0,0	1/1:72,3:63:13.95:242,14,0	./.	0/0:7,0:6:9.03:0,9,114	0/0:40,0:37:77.94:0,78,963	./.	0/0:33,0:29:55.80:0,56,527	0/1:22,0:20:5.81:6,0,19	0/0:12,0:11:24.02:0,24,283
chr10	83431785	.	ATG	A	72.04	PASS	AB=0.967;AC=10;AF=0.200;AN=50;BaseQRankSum=6.715;DP=847;FS=20.321;HRun=0;HaplotypeScore=150.7121;InbreedingCoeff=0.1544;MQ=42.72;MQ0=42;MQRankSum=-4.293;QD=0.37;ReadPosRankSum=-4.025;VQSLOD=0.1903;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:17:4.34:0,4,20	0/0:19,0:17:34.85:0,35,633	./.	0/0:15,0:1:3.01:0,3,35	0/0:13,0:10:0:0,0,1	0/0:24,0:24:66.09:0,66,1223	0/1:27,0:20:0.21:0,0,0	0/0:38,0:29:24.94:0,25,541	0/0:54,1:52:91.18:0,91,2486	0/0:64,2:59:36.06:0,36,2328	0/0:20,0:20:38.95:0,39,813	0/0:43,0:43:99:0,107,1979	1/1:12,0:9:4.22:19,4,0	0/1:25,3:23:5.13:12,0,5	0/0:29,0:26:66.03:0,66,1223	0/0:30,0:29:67.46:0,67,1267	0/0:41,0:39:87.22:0,87,1877	0/0:32,1:32:69.42:0,69,1454	0/1:26,1:10:3.59:4,0,282	0/1:14,0:14:0:0,0,0	0/0:122,0:100:87.38:0,87,1669	./.	0/1:13,0:13:16.13:16,0,416	0/0:45,1:41:99:0,111,2151	./.	0/1:38,1:35:47.12:47,0,260	0/1:16,0:14:17.61:18,0,122	0/1:15,2:13:71.34:76,0,71
chr10	83431787	.	GCA	G	1570.63	PASS	AB=0.811;AC=20;AF=0.400;AN=50;BaseQRankSum=10.816;DP=847;FS=2.720;HRun=0;HaplotypeScore=150.1716;InbreedingCoeff=0.6303;MQ=42.79;MQ0=43;MQRankSum=-8.405;QD=5.00;ReadPosRankSum=-3.580;VQSLOD=2.6860;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,3:17:7.31:29,7,0	0/0:20,0:17:30.09:0,30,506	./.	0/0:12,0:1:2.97:0,3,20	0/0:2,11:10:0:0,0,1	0/0:24,0:24:57.18:0,57,935	1/1:14,0:20:2.13:7,2,0	1/1:14,4:28:40.29:382,40,0	0/0:53,2:52:99:0,110,2128	0/0:64,3:60:90.45:0,90,1900	0/0:19,0:19:42.12:0,42,669	0/0:41,1:42:94.78:0,95,1562	1/1:6,7:10:5.84:76,6,0	1/1:9,19:23:8.43:93,8,0	0/0:29,1:27:53.99:0,54,901	0/0:27,2:28:27.61:0,28,999	0/1:37,6:41:10.53:11,0,1543	0/1:30,2:31:3.09:3,0,1109	0/1:23,0:9:10.59:11,0,57	0/1:3,1:15:0:0,0,0	0/0:106,20:104:93.18:0,93,1557	./.	0/0:13,0:13:30.57:0,31,487	0/0:46,2:43:99:0,105,1753	./.	1/1:16,23:35:42.50:839,43,0	1/1:7,0:12:14.29:74,14,0	1/1:13,4:13:17.04:219,17,0
chr10	83431798	.	CAT	C	513.40	PASS	AB=0.962;AC=9;AF=0.173;AN=52;BaseQRankSum=8.907;DP=854;FS=3.755;HRun=0;HaplotypeScore=171.9469;InbreedingCoeff=0.2726;MQ=44.23;MQ0=32;MQRankSum=-6.841;QD=2.98;ReadPosRankSum=0.508;VQSLOD=2.7391;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,2:18:6.71:7,0,41	0/0:18,1:16:29.84:0,30,625	./.	./.	0/0:17,0:15:2.63:0,3,24	0/0:23,0:23:63.17:0,63,1142	0/0:28,0:22:14.57:0,15,99	0/1:42,0:32:15.21:15,0,209	0/0:54,0:51:99:0,106,2522	0/0:67,0:60:99:0,118,2416	0/0:20,0:20:45.13:0,45,814	0/0:39,1:40:99:0,102,1868	0/1:14,1:14:23.16:23,0,105	0/1:27,1:25:0.10:47,0,0	0/0:28,1:26:68.77:0,69,1158	0/0:29,1:29:51.51:0,52,1231	0/0:46,0:43:49.05:0,49,1933	0/0:29,0:29:55.56:0,56,1419	0/0:22,0:13:29.47:0,29,160	0/0:18,0:17:3:0,3,25	0/0:134,5:120:99:0,131,2239	0/0:12,1:8:3:0,3,25	0/0:15,0:15:18.70:0,19,572	0/0:45,1:44:99:0,117,2175	0/0:11,0:10:3:0,3,25	0/1:42,0:39:99:367,0,117	1/1:14,0:12:9.35:52,9,0	1/1:9,2:11:5.14:136,5,0
chr10	83431799	.	ATG	A	314.98	PASS	AB=0.973;AC=8;AF=0.154;AN=52;BaseQRankSum=8.607;DP=848;FS=1.209;HRun=0;HaplotypeScore=171.5936;InbreedingCoeff=0.0394;MQ=44.44;MQ0=33;MQRankSum=-8.725;QD=1.78;ReadPosRankSum=-1.512;VQSLOD=2.5265;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,1:17:30.75:35,0,31	0/0:18,1:16:24.97:0,25,607	./.	./.	0/0:17,0:15:2.64:0,3,42	0/0:23,0:23:62.95:0,63,1151	0/0:27,0:21:10.86:0,11,130	0/1:41,1:32:64.99:65,0,414	0/0:53,1:51:99:0,129,2584	0/0:65,2:60:99:0,113,2622	0/0:19,0:19:45.15:0,45,856	0/0:39,0:39:98.86:0,99,1790	0/0:17,0:14:12.97:0,13,237	0/1:28,0:25:17:17,0,35	0/0:30,0:27:71.78:0,72,1291	0/0:30,0:29:70.09:0,70,1219	0/0:46,0:43:99:0,105,2054	0/0:29,0:29:77.30:0,77,1384	0/1:20,1:12:20.56:21,0,143	0/0:18,0:17:2.97:0,3,20	0/0:137,0:118:99:0,132,2492	0/0:13,1:9:6.02:0,6,85	0/0:14,0:14:24.97:0,25,590	0/0:47,0:44:99:0,117,2182	0/0:10,1:10:3.01:0,3,49	0/1:40,2:39:99:101,0,418	1/1:14,0:12:14.81:141,15,0	0/1:11,0:11:20.40:70,0,20
chr10	83431815	.	G	GCA	6325.51	PASS	AB=1.000;AC=25;AF=0.463;AN=54;BaseQRankSum=-1.904;DP=937;FS=30.237;HRun=0;HaplotypeScore=169.4383;InbreedingCoeff=0.8785;MQ=46.13;MQ0=23;MQRankSum=2.295;QD=13.99;ReadPosRankSum=-4.302;VQSLOD=2.0621;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,8:25:18.61:307,19,0	0/0:15,0:13:20.65:0,21,327	./.	0/0:20,0:8:14.49:0,14,167	1/1:9,15:21:10.64:180,11,0	0/0:26,0:25:60.18:0,60,737	1/1:16,12:26:21.03:340,21,0	1/1:37,9:37:27.57:739,28,0	0/0:54,0:53:99:0,135,1657	0/0:64,0:59:99:0,118,1710	0/0:20,0:19:39.06:0,39,460	0/0:34,0:34:81.26:0,81,1015	1/1:13,9:19:26.40:602,26,0	1/1:11,20:28:20.72:287,21,0	0/0:33,0:30:78.18:0,78,938	0/0:28,0:27:54.17:0,54,679	0/0:44,0:41:99:0,99,1187	0/1:31,0:32:23.39:23,0,765	1/1:14,6:15:5.29:218,5,0	1/1:12,8:18:8.81:137,9,0	1/1:81,56:139:78.13:2713,78,0	1/1:13,6:14:18.05:257,18,0	0/0:16,0:16:42.13:0,42,528	0/0:51,0:48:99:0,108,1317	1/1:8,6:12:9.02:120,9,0	0/0:50,0:48:83.16:0,83,1183	1/1:12,7:18:27.09:402,27,0	0/0:19,0:19:30.94:0,31,357
chr10	83432536	.	G	GGCATTACT	58636.80	PASS	AB=0.790;AC=40;AF=0.714;AN=56;BaseQRankSum=-8.058;DP=943;FS=20.647;HRun=0;HaplotypeScore=214.0965;InbreedingCoeff=-0.2014;MQ=71.36;MQ0=0;MQRankSum=-20.323;QD=62.78;ReadPosRankSum=-2.830;VQSLOD=3.0446;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,24:36:78.18:3062,78,0	0/0:7,1:9:21.07:0,21,594	0/1:20,6:26:99:837,0,745	0/1:28,4:33:99:363,0,1090	1/1:12,27:44:96.25:3735,96,0	0/1:21,9:33:99:1112,0,1187	1/1:7,15:24:60.21:2480,60,0	1/1:34,23:64:99:6445,169,0	0/1:23,6:31:99:1018,0,1659	0/1:35,9:50:99:927,0,2500	0/1:31,1:32:99:180,0,2121	0/1:30,4:36:99:560,0,2216	1/1:8,18:30:75.26:3194,75,0	1/1:9,17:31:75.21:2923,75,0	0/1:29,3:34:99:915,0,1539	0/1:26,7:36:99:708,0,1794	0/1:16,15:35:99:1677,0,998	0/1:18,7:27:99:713,0,1354	1/1:24,8:37:96.32:3540,96,0	1/1:11,24:37:96.28:3678,96,0	1/1:19,5:25:57.07:1880,57,0	1/1:13,18:36:78.22:3211,78,0	0/1:28,2:33:6.52:7,0,2009	0/1:19,6:29:99:613,0,1374	1/1:8,17:26:75.26:2969,75,0	0/1:17,33:54:19.39:5722,0,19	1/1:12,28:41:99:4712,111,0	1/1:2,10:13:33.11:1457,33,0
chr10	83432539	.	A	ATTACTGCG	44304.15	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=1.386;DP=831;FS=15.351;HRun=0;HaplotypeScore=213.2142;InbreedingCoeff=-0.1371;MQ=76.28;MQ0=0;MQRankSum=-20.953;QD=55.87;ReadPosRankSum=0.944;VQSLOD=3.3854;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:72.20:2494,72,0	0/0:8,0:8:21.07:0,21,636	0/1:26,0:27:99:634,0,984	0/1:33,0:33:99:272,0,1382	1/1:39,0:39:47.29:3128,47,0	0/1:28,0:28:99:950,0,1326	1/1:22,0:22:32.20:1985,32,0	1/1:51,0:51:86.89:4518,87,0	0/1:30,0:30:99:763,0,1802	0/1:50,0:50:99:645,0,2734	0/1:30,0:30:99:142,0,2300	0/1:35,0:35:99:361,0,2378	1/1:24,0:24:63.22:2332,63,0	1/1:27,0:27:63.22:2236,63,0	0/1:28,0:28:99:540,0,1671	0/1:33,0:33:99:700,0,1942	0/1:32,0:32:99:1332,0,1094	0/1:26,0:26:99:598,0,1449	0/1:30,0:30:5.76:2002,0,6	1/1:30,0:30:84.29:2948,84,0	1/1:9,8:24:45.11:1615,45,0	1/1:26,0:26:63.22:2354,63,0	0/0:30,0:30:75.26:0,75,2232	0/1:24,0:24:99:524,0,1496	1/1:21,0:21:60.21:2168,60,0	0/1:47,0:47:76.87:4308,0,77	1/1:37,0:36:96.33:3620,96,0	1/1:11,0:11:30.10:1137,30,0
chr10	83432874	.	G	GT	2356.22	PASS	AB=0.841;AC=23;AF=0.411;AN=56;BaseQRankSum=16.697;DP=803;FS=172.469;HRun=4;HaplotypeScore=140.9824;InbreedingCoeff=-0.7154;MQ=70.56;MQ0=0;MQRankSum=-14.377;QD=3.62;ReadPosRankSum=0.190;VQSLOD=-0.6546;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:43,18:61:99:408,0,1225	0/1:9,4:13:99:111,0,254	0/1:26,4:24:52.61:53,0,550	0/1:26,4:28:41.54:42,0,601	0/1:37,7:44:99:100,0,970	0/1:24,7:31:99:149,0,684	0/1:17,6:22:99:134,0,481	0/1:41,8:49:99:138,0,1032	0/1:23,4:27:46.09:46,0,663	0/1:23,13:36:99:370,0,646	0/0:24,2:26:1.69:0,2,682	0/0:15,1:16:8.60:0,9,471	0/1:19,2:21:8.62:9,0,479	0/1:22,4:26:43.40:43,0,673	0/1:15,2:17:30.94:31,0,428	0/1:19,4:23:98.28:98,0,475	0/0:33,7:40:26.22:0,26,1044	0/1:10,2:12:12.49:12,0,244	0/1:23,9:31:99:233,0,543	0/0:36,2:38:18.92:0,19,956	0/1:29,8:37:99:135,0,726	0/1:19,5:24:93.04:93,0,518	0/1:23,2:25:4.58:5,0,645	0/1:18,6:24:41.31:41,0,549	0/1:15,2:17:36.96:37,0,365	0/1:24,7:31:99:141,0,602	0/0:30,3:33:4.81:0,5,804	0/1:14,3:17:79.50:79,0,278
chr10	83432910	.	G	GCC	890.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.385;DP=633;FS=5.595;HRun=7;HaplotypeScore=106.3165;InbreedingCoeff=0.9636;MQ=79.31;MQ0=0;MQRankSum=-0.658;QD=29.67;ReadPosRankSum=-0.063;VQSLOD=3.2364;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:35:70.78:0,71,756	0/0:10,0:10:20.08:0,20,305	0/0:16,0:16:29.91:0,30,328	0/0:17,0:17:27.03:0,27,296	0/0:47,0:47:99:0,122,1352	0/0:28,0:28:71.80:0,72,786	0/0:16,0:15:36.19:0,36,383	0/0:22,0:21:48.13:0,48,559	0/0:31,0:31:90:0,90,1026	0/0:24,0:24:67.75:0,68,773	0/0:26,0:26:67.73:0,68,800	0/0:14,0:14:39.11:0,39,454	0/0:23,0:23:47.36:0,47,557	0/0:27,0:27:74.81:0,75,873	0/0:20,0:20:57.15:0,57,653	0/0:21,0:21:63.19:0,63,734	0/0:34,0:34:93.26:0,93,1084	0/0:5,0:5:12.03:0,12,140	0/0:22,0:22:54.93:0,55,605	0/0:26,0:26:69.16:0,69,788	1/1:7,22:30:60.20:985,60,0	0/0:21,0:21:46.07:0,46,557	0/0:25,0:25:67.74:0,68,773	0/0:15,0:15:39.11:0,39,454	0/0:15,0:15:39.03:0,39,424	0/0:22,0:22:60.17:0,60,695	0/0:27,0:27:80.27:0,80,915	0/0:14,0:14:34.91:0,35,389
chr10	83434002	.	CT	C	1081.79	PASS	AB=0.537;AC=3;AF=0.054;AN=56;BaseQRankSum=6.590;DP=662;FS=4.446;HRun=1;HaplotypeScore=79.0707;InbreedingCoeff=0.6466;MQ=88.20;MQ0=0;MQRankSum=-1.225;QD=31.82;ReadPosRankSum=2.735;VQSLOD=3.4321;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,1913	0/0:9,0:8:24.07:0,24,360	0/0:31,0:31:86.22:0,86,1332	0/0:19,0:19:48.13:0,48,674	0/0:32,0:32:93.27:0,93,1413	0/0:13,0:13:39.13:0,39,623	0/0:20,0:20:60.19:0,60,937	0/0:29,0:29:87.28:0,87,1331	0/0:18,0:18:54.17:0,54,840	0/0:27,0:27:81.28:0,81,1295	0/0:27,0:27:75.19:0,75,1125	0/0:17,0:17:51.15:0,51,766	0/0:25,0:25:75.26:0,75,1192	0/0:20,0:20:60.19:0,60,932	0/0:26,0:26:78.26:0,78,1221	0/0:16,0:16:48.15:0,48,740	0/0:28,0:28:84.27:0,84,1314	0/0:18,0:18:54.11:0,54,785	0/0:16,0:16:48.16:0,48,767	0/0:34,0:33:93.30:0,93,1458	0/0:32,0:32:96.31:0,96,1510	0/0:27,0:27:78.25:0,78,1203	0/0:31,0:31:93.26:0,93,1412	0/0:25,0:25:75.21:0,75,1166	0/0:25,0:24:69.21:0,69,1055	0/1:3,19:22:77.69:728,0,78	0/0:19,0:19:57.18:0,57,884	1/1:0,12:12:33.11:460,33,0
chr10	83434645	.	G	GA	7355.48	PASS	AB=0.767;AC=35;AF=0.625;AN=56;BaseQRankSum=22.125;DP=928;FS=2.132;HRun=0;HaplotypeScore=373.0757;InbreedingCoeff=-0.2984;MQ=60.83;MQ0=0;MQRankSum=-21.784;QD=8.28;ReadPosRankSum=0.126;VQSLOD=4.1509;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,48:70:90.53:780,91,0	0/1:16,4:20:17.51:18,0,519	0/0:18,0:18:44.42:0,44,556	0/1:12,0:12:18.92:19,0,152	1/1:6,46:52:99:677,114,0	0/1:20,8:28:68.71:69,0,578	1/1:13,22:35:8.59:432,9,0	0/1:12,18:30:28.72:330,0,29	0/1:23,10:33:99:147,0,651	0/1:24,15:39:99:219,0,823	0/1:28,12:40:69.70:70,0,938	0/1:23,11:34:88.75:89,0,827	1/1:5,17:22:50.66:382,51,0	1/1:10,26:36:41.41:514,41,0	0/1:25,6:31:26.93:27,0,919	0/1:24,9:33:88.49:88,0,855	0/1:25,11:36:79.50:80,0,740	0/1:18,5:23:60.18:60,0,608	0/1:10,14:24:14.58:295,0,15	1/1:12,34:46:71.46:658,71,0	1/1:9,16:25:6.96:210,7,0	1/1:4,34:38:91.79:638,92,0	0/1:30,12:42:91.02:91,0,994	0/0:18,4:22:6.59:0,7,583	0/1:7,18:25:0.23:284,0,0	0/1:27,9:36:92.24:92,0,999	1/1:12,43:54:96.22:997,96,0	0/1:17,6:23:91.16:91,0,547
chr10	83434646	.	G	GACTGT	33956.16	PASS	AB=0.799;AC=38;AF=0.679;AN=56;BaseQRankSum=20.537;DP=1028;FS=0.801;HRun=0;HaplotypeScore=414.2568;InbreedingCoeff=-0.1748;MQ=58.90;MQ0=0;MQRankSum=-22.444;QD=34.06;ReadPosRankSum=-0.244;VQSLOD=3.6070;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,48:76:98.45:3349,98,0	0/1:18,4:22:99:485,0,913	0/0:18,0:18:40.08:0,40,863	0/0:13,0:13:5.42:0,5,383	1/1:14,46:61:84.12:2011,84,0	0/1:20,8:28:99:471,0,999	1/1:18,22:40:17.44:2050,17,0	1/1:23,18:41:42.76:2126,43,0	0/1:25,9:35:99:726,0,1142	0/1:31,15:46:99:1075,0,1423	0/1:32,11:44:99:414,0,1607	0/1:26,11:37:99:614,0,1453	1/1:8,17:25:36.47:1425,36,0	1/1:11,26:37:69.60:2036,70,0	0/1:26,6:32:99:213,0,1594	0/1:25,9:34:99:575,0,1460	0/1:28,11:39:99:821,0,1243	0/1:17,5:22:99:242,0,1047	1/1:14,14:28:69.22:1672,69,0	1/1:18,34:52:48.17:2605,48,0	1/1:16,16:32:14.24:1146,14,0	1/1:13,34:47:96.29:2302,96,0	0/1:32,11:44:99:547,0,1757	0/1:19,4:23:99:362,0,985	1/1:8,18:26:62.23:1538,62,0	0/1:32,9:41:99:761,0,1698	1/1:19,42:61:99:3988,106,0	0/1:17,6:23:99:404,0,1003
chr10	83434667	.	A	AAT	8147.30	PASS	AB=0.763;AC=24;AF=0.429;AN=56;BaseQRankSum=20.095;DP=952;FS=12.981;HRun=0;HaplotypeScore=363.4903;InbreedingCoeff=-0.7499;MQ=69.01;MQ0=0;MQRankSum=-15.638;QD=10.01;ReadPosRankSum=0.621;VQSLOD=3.6621;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:64:99:0,135,2186	0/1:13,6:19:99:149,0,573	0/0:21,0:21:48.20:0,48,878	0/0:23,0:23:60.18:0,60,915	0/1:38,25:63:99:673,0,1263	0/1:15,10:25:99:329,0,662	0/0:30,0:30:87.30:0,87,1402	0/1:33,10:43:99:254,0,1315	0/1:19,15:34:99:418,0,834	0/1:28,23:51:99:832,0,1215	0/1:34,16:50:99:505,0,1462	0/1:18,10:28:99:231,0,800	0/1:19,4:23:27.84:28,0,773	0/1:22,8:30:99:138,0,856	0/1:20,8:28:99:181,0,855	0/1:17,9:27:99:273,0,754	0/1:17,13:30:99:410,0,702	0/1:22,3:25:66.54:67,0,1002	0/1:21,5:26:99:175,0,879	0/1:26,14:40:99:479,0,1012	0/1:22,4:26:70.51:71,0,715	0/1:32,19:51:99:597,0,1137	0/1:28,15:43:99:411,0,1244	0/1:18,4:22:99:121,0,811	0/1:12,9:21:99:307,0,477	0/1:28,14:41:99:495,0,1195	0/1:24,22:47:99:838,0,933	0/1:15,5:20:99:168,0,670
chr10	83434751	.	G	GGGGC	20521.76	PASS	AB=0.783;AC=26;AF=0.464;AN=56;BaseQRankSum=16.995;DP=1155;FS=46.356;HRun=0;HaplotypeScore=263.1042;InbreedingCoeff=-0.8667;MQ=80.68;MQ0=0;MQRankSum=-16.651;QD=20.28;ReadPosRankSum=-0.304;VQSLOD=2.6853;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:87,0:87:99:0,235,4321	0/1:12,9:21:99:657,0,555	0/1:27,10:38:99:725,0,874	0/1:34,8:42:99:567,0,879	0/1:36,15:51:99:843,0,1258	0/1:21,13:34:99:932,0,907	0/0:56,0:56:99:0,141,2584	0/1:36,6:41:99:608,0,1267	0/1:23,10:33:99:743,0,1027	0/1:39,17:56:99:1310,0,1658	0/1:24,10:34:99:682,0,989	0/1:27,9:36:99:802,0,1098	0/1:25,10:35:99:650,0,1125	0/1:33,15:48:99:1343,0,1169	0/1:17,12:29:99:840,0,752	0/1:24,8:32:99:757,0,1019	0/1:35,13:48:99:1079,0,1540	0/1:26,5:31:99:235,0,1200	0/1:22,9:31:99:695,0,993	0/1:23,9:32:99:589,0,972	0/1:46,7:52:99:494,0,2020	0/1:36,19:55:99:1213,0,1478	0/1:37,12:49:99:600,0,1340	0/1:19,6:25:99:531,0,717	0/1:26,17:43:99:1046,0,1091	0/1:34,20:54:99:1676,0,1303	0/1:33,10:43:99:634,0,1339	0/1:13,4:17:99:268,0,676
chr10	83435232	.	TACAG	T	1946.14	PASS	AB=0.737;AC=2;AF=0.036;AN=56;BaseQRankSum=4.641;DP=1328;FS=13.453;HRun=0;HaplotypeScore=257.4302;InbreedingCoeff=-0.0370;MQ=75.05;MQ0=0;MQRankSum=-2.853;QD=14.97;ReadPosRankSum=-1.234;VQSLOD=1.7978;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:49,30:79:99:1204,0,2966	0/0:31,0:31:93.32:0,93,2378	0/0:27,0:27:69.04:0,69,1645	0/0:47,0:45:99:0,126,3006	0/0:50,0:50:99:0,135,3509	0/0:27,0:27:81.28:0,81,2114	0/1:34,17:51:99:831,0,1818	0/0:48,0:48:99:0,135,3480	0/0:50,0:50:99:0,147,3788	0/0:55,0:55:99:0,154,3999	0/0:29,0:29:69.24:0,69,1752	0/0:49,0:49:99:0,135,3516	0/0:32,0:32:90.31:0,90,2345	0/0:39,0:39:99:0,102,2599	0/0:63,0:63:99:0,181,4644	0/0:37,0:37:99:0,105,2655	0/0:70,0:70:99:0,193,5059	0/0:35,0:35:93.28:0,93,2384	0/0:41,0:41:99:0,114,2924	0/0:39,0:39:93.31:0,93,2380	0/0:106,0:106:99:0,268,6992	0/0:51,0:51:99:0,138,3621	0/0:43,0:43:99:0,114,2962	0/0:55,0:55:99:0,163,4138	0/0:40,0:40:99:0,99,2469	0/0:57,0:57:99:0,151,3917	0/0:51,0:50:99:0,132,3445	0/0:25,0:25:69.24:0,69,1822
chr10	83435280	.	AGAG	A	9206.04	PASS	AB=0.686;AC=12;AF=0.214;AN=56;BaseQRankSum=1.526;DP=1251;FS=4.336;HRun=0;HaplotypeScore=229.3687;InbreedingCoeff=-0.2727;MQ=77.71;MQ0=0;MQRankSum=-1.778;QD=15.93;ReadPosRankSum=1.213;VQSLOD=4.4298;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:39,24:63:99:894,0,2025	0/0:26,0:26:78.26:0,78,1701	0/0:26,0:26:65.87:0,66,1241	0/0:33,0:32:75.36:0,75,1664	0/1:26,13:39:99:587,0,998	0/0:34,0:34:99:0,102,2226	0/1:27,41:67:99:1480,0,1393	0/1:27,21:48:99:803,0,1406	0/0:63,0:63:99:0,184,3961	0/0:52,0:52:99:0,151,3325	0/0:19,0:19:48.15:0,48,1043	0/0:49,0:49:99:0,144,3084	0/1:15,15:30:99:565,0,915	0/1:14,27:41:99:865,0,849	0/0:52,0:52:99:0,157,3358	0/0:37,0:37:99:0,111,2457	0/0:68,0:68:99:0,202,4494	0/0:33,0:33:94.16:0,94,1979	0/1:19,15:33:99:613,0,1052	0/1:16,13:29:99:327,0,973	0/1:54,49:103:99:1161,0,2990	0/1:31,11:42:99:557,0,1289	0/0:40,0:40:99:0,108,2391	0/0:59,0:59:99:0,175,3754	0/1:13,15:28:99:526,0,743	0/0:50,0:50:99:0,144,3103	0/1:26,27:53:99:827,0,1545	0/0:32,0:32:87.30:0,87,1914
chr10	83435386	.	A	AGT	21263.95	PASS	AB=0.704;AC=19;AF=0.339;AN=56;BaseQRankSum=-14.730;DP=1441;FS=4.298;HRun=0;HaplotypeScore=196.4139;InbreedingCoeff=0.6017;MQ=82.37;MQ0=0;MQRankSum=-4.014;QD=29.29;ReadPosRankSum=2.005;VQSLOD=5.5840;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,73:78:99:3364,193,0	0/0:17,0:17:45.15:0,45,609	0/0:42,0:42:99:0,105,1392	0/0:43,0:43:99:0,107,1357	1/1:8,37:45:99:1892,108,0	0/0:38,0:38:99:0,105,1420	1/1:4,48:54:99:2471,141,0	0/1:39,24:66:99:1152,0,1018	0/0:58,0:58:99:0,169,2255	0/0:71,0:71:99:0,178,2365	0/0:32,0:32:78.26:0,78,1055	0/0:49,0:49:99:0,132,1770	1/1:3,24:28:72.25:1258,72,0	1/1:5,48:53:99:2313,132,0	0/0:50,0:50:99:0,141,1908	0/0:44,0:44:99:0,120,1624	0/0:48,0:48:99:0,132,1766	0/0:43,0:43:99:0,120,1564	0/1:38,18:57:99:891,0,1040	0/1:20,28:48:99:1293,0,482	0/1:101,62:163:99:2304,0,3170	1/1:6,41:49:99:2092,120,0	0/0:29,0:29:81.22:0,81,1043	0/0:61,0:61:99:0,163,2185	1/1:2,30:33:75.26:1315,75,0	0/0:66,0:66:99:0,184,2449	0/1:30,21:51:99:918,0,825	0/0:24,0:24:69.23:0,69,933
chr10	83435565	.	A	AG	19773.90	PASS	AB=0.680;AC=28;AF=0.500;AN=56;BaseQRankSum=6.631;DP=1316;FS=14.382;HRun=4;HaplotypeScore=171.7830;InbreedingCoeff=-0.7143;MQ=72.43;MQ0=0;MQRankSum=-2.119;QD=16.97;ReadPosRankSum=3.796;VQSLOD=3.2889;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:99,0:99:99:0,286,3169	0/1:9,10:19:99:311,0,252	0/1:22,9:30:99:177,0,434	0/1:19,7:26:99:214,0,439	0/1:30,24:54:99:781,0,758	0/1:16,16:32:99:521,0,377	0/0:52,0:52:99:0,141,1558	0/1:34,35:69:99:1228,0,765	0/1:21,23:44:99:586,0,569	0/1:32,42:74:99:1473,0,602	0/1:18,20:38:99:553,0,433	0/1:28,28:56:99:828,0,795	0/1:14,20:34:99:621,0,319	0/1:18,20:38:99:598,0,422	0/1:25,33:58:99:1147,0,599	0/1:22,25:47:99:845,0,539	0/1:31,16:47:99:491,0,731	0/1:10,20:30:99:695,0,197	0/1:21,21:42:99:716,0,417	0/1:21,17:38:99:499,0,543	0/1:40,41:81:99:1374,0,970	0/1:21,17:39:99:650,0,453	0/1:33,21:54:99:598,0,841	0/1:26,28:54:99:887,0,554	0/1:29,14:43:99:592,0,480	1/1:3,50:53:99:1988,147,0	0/1:21,15:37:99:468,0,577	1/1:3,24:27:69.23:935,69,0
chr10	83435605	.	AG	A	2631.07	PASS	AB=0.681;AC=5;AF=0.089;AN=56;BaseQRankSum=3.734;DP=1344;FS=2.880;HRun=4;HaplotypeScore=194.7186;InbreedingCoeff=-0.0980;MQ=85.60;MQ0=0;MQRankSum=-3.931;QD=13.49;ReadPosRankSum=3.509;VQSLOD=2.3805;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:106,0:106:99:0,307,4208	0/0:22,0:22:60.20:0,60,827	0/0:49,0:49:99:0,133,1789	0/0:40,0:40:99:0,108,1408	0/1:21,26:47:99:852,0,413	0/0:36,0:36:96.32:0,96,1343	0/0:69,0:69:99:0,205,2830	0/0:52,0:52:99:0,135,1890	0/0:52,0:52:99:0,138,1916	0/0:57,0:57:99:0,157,2169	0/0:37,0:37:84.28:0,84,1175	0/0:57,0:57:99:0,156,2182	0/1:20,12:32:99:341,0,665	0/1:27,13:40:99:354,0,935	0/0:57,0:57:99:0,166,2260	0/0:37,0:37:99:0,102,1413	0/0:63,0:63:99:0,184,2522	0/0:30,0:30:81.25:0,81,1107	0/0:36,0:36:96.31:0,96,1325	0/0:42,0:42:99:0,114,1595	0/0:83,0:83:99:0,238,3300	0/1:18,23:41:99:648,0,503	0/0:47,0:47:99:0,108,1478	0/0:70,0:70:99:0,202,2794	0/1:15,20:35:99:555,0,437	0/0:53,0:53:99:0,147,2038	0/0:37,0:37:99:0,102,1410	0/0:17,0:17:39.11:0,39,528
chr10	83435784	.	T	TAG	14690.03	PASS	AB=0.736;AC=28;AF=0.500;AN=56;BaseQRankSum=19.060;DP=984;FS=97.422;HRun=0;HaplotypeScore=200.4849;InbreedingCoeff=-1.0000;MQ=73.11;MQ0=0;MQRankSum=-13.160;QD=14.93;ReadPosRankSum=1.653;VQSLOD=1.4675;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:45,24:69:99:811,0,1506	0/1:11,8:19:99:394,0,255	0/1:20,11:32:99:356,0,441	0/1:24,3:25:99:147,0,458	0/1:14,17:31:99:668,0,477	0/1:22,16:38:99:633,0,702	0/1:20,15:35:99:499,0,650	0/1:32,19:51:99:952,0,799	0/1:22,9:31:99:352,0,814	0/1:35,16:52:99:775,0,1216	0/1:27,14:40:99:664,0,834	0/1:24,15:39:99:504,0,827	0/1:14,14:28:99:684,0,483	0/1:19,10:29:99:415,0,636	0/1:24,13:37:99:512,0,674	0/1:18,15:33:99:520,0,646	0/1:27,5:32:99:236,0,954	0/1:7,10:17:99:297,0,181	0/1:26,12:38:99:571,0,920	0/1:25,10:35:99:503,0,729	0/1:25,15:40:99:595,0,800	0/1:26,12:38:99:353,0,972	0/1:25,13:38:99:752,0,711	0/1:23,10:33:99:294,0,877	0/1:18,10:28:99:491,0,623	0/1:27,14:41:99:659,0,938	0/1:17,17:35:99:829,0,628	0/1:11,6:17:99:227,0,389
chr10	83436062	.	T	TG	1009.40	PASS	AB=0.857;AC=11;AF=0.196;AN=56;BaseQRankSum=10.774;DP=637;FS=106.059;HRun=0;HaplotypeScore=87.6956;InbreedingCoeff=-0.2425;MQ=84.29;MQ0=0;MQRankSum=-5.423;QD=4.74;ReadPosRankSum=-1.204;VQSLOD=-0.5998;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,141,1941	0/1:5,3:8:99:146,0,143	0/1:31,0:31:99:129,0,842	0/1:29,0:29:99:155,0,774	0/1:20,5:25:52.66:53,0,665	0/0:22,0:22:63.21:0,63,880	0/0:26,0:26:78.19:0,78,1034	0/0:17,0:17:51.17:0,51,713	0/0:33,0:33:93.31:0,93,1298	0/1:25,2:27:18.71:19,0,874	0/1:12,6:18:99:202,0,394	0/0:24,0:24:72.24:0,72,999	0/0:21,0:21:63.20:0,63,863	0/0:19,0:19:48.16:0,48,670	0/0:16,0:16:45.14:0,45,611	0/0:25,0:25:72.22:0,72,987	0/0:19,0:19:57.17:0,57,773	0/0:10,0:10:30.10:0,30,419	0/0:27,0:27:78.24:0,78,1057	0/1:13,4:17:99:116,0,494	0/0:37,0:37:99:0,108,1493	0/1:9,2:11:51.86:52,0,344	0/1:10,7:17:99:246,0,328	0/0:25,0:25:75.23:0,75,1029	0/1:17,2:19:27.42:27,0,622	0/0:31,1:32:47.38:0,47,1173	0/0:21,0:20:63.21:0,63,879	0/1:10,1:11:12.30:12,0,272
chr10	83436191	.	T	TC	850.04	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=-3.305;DP=422;FS=13.554;HRun=2;HaplotypeScore=48.2352;InbreedingCoeff=0.8441;MQ=51.63;MQ0=11;MQRankSum=1.008;QD=31.48;ReadPosRankSum=0.132;VQSLOD=1.7593;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:81.19:0,81,1002	0/0:9,0:9:27.08:0,27,334	./.	./.	0/0:8,0:6:12:0,12,130	0/0:12,0:12:33.09:0,33,396	0/0:20,0:18:51.12:0,51,614	0/0:24,0:22:60.12:0,60,710	0/0:17,0:17:48.15:0,48,594	0/0:7,0:7:21.07:0,21,260	0/0:6,0:5:8.96:0,9,88	0/0:17,0:17:41.71:0,42,508	0/0:8,0:7:18.06:0,18,223	0/0:18,0:17:42.09:0,42,502	0/0:17,0:17:36.11:0,36,446	0/0:16,0:15:42.09:0,42,503	0/0:24,0:23:57.16:0,57,693	0/0:19,0:19:54.17:0,54,668	0/0:21,0:18:48.15:0,48,592	0/0:8,0:8:18.04:0,18,211	1/1:2,25:25:69.12:944,69,0	0/0:9,0:8:21.07:0,21,260	0/0:5,0:4:8.99:0,9,94	0/0:23,0:23:63.20:0,63,781	0/0:9,0:9:17.90:0,18,223	0/0:21,0:19:54.11:0,54,639	0/0:24,0:24:69.22:0,69,855	0/0:13,0:13:36.09:0,36,432
chr10	83436369	.	CAGACCCTGTGAGAGAG	C	592.23	PASS	AC=4;AF=0.083;AN=48;BaseQRankSum=3.574;DP=428;FS=4.916;HRun=0;HaplotypeScore=84.9065;InbreedingCoeff=0.5401;MQ=27.53;MQ0=170;MQRankSum=-2.409;QD=23.69;ReadPosRankSum=2.889;VQSLOD=1.2345;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:18:30.10:0,30,1888	0/0:7,0:4:12.04:0,12,755	./.	./.	0/0:8,3:5:0.47:0,0,1	0/0:11,0:7:21.07:0,21,1618	0/0:27,0:11:21.07:0,21,1353	0/0:16,0:4:3.01:0,3,180	0/0:12,0:3:9:0,9,418	0/0:14,0:7:21.07:0,21,1386	0/0:9,0:5:3.01:0,3,219	0/0:18,0:10:24.08:0,24,1757	1/1:7,1:2:3.01:138,3,0	1/1:11,6:5:12.04:553,12,0	0/0:15,0:6:6.02:0,6,467	0/0:10,0:4:9.03:0,9,691	0/0:33,0:24:48.16:0,48,3463	0/0:24,0:14:30.10:0,30,2327	0/0:18,0:10:30.10:0,30,2280	0/0:15,0:11:21.07:0,21,1232	0/0:34,0:7:21.07:0,21,1255	./.	0/0:5,0:3:2.92:0,3,234	0/0:18,0:5:6.02:0,6,469	./.	0/0:21,0:11:30.10:0,30,1834	0/0:23,0:8:14.53:0,15,1029	0/0:9,0:7:15.02:0,15,940
chr10	83442818	.	AAAAAAAGAAGAAG	A	1889.91	PASS	AB=0.967;AC=11;AF=0.196;AN=56;BaseQRankSum=8.188;DP=298;FS=0.000;HRun=0;HaplotypeScore=97.8542;InbreedingCoeff=-0.0746;MQ=41.32;MQ0=27;MQRankSum=-1.608;QD=14.43;ReadPosRankSum=3.570;VQSLOD=1.2691;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:7:6.38:0,6,39	0/0:8,0:7:19.48:0,19,585	0/0:14,0:9:18.38:0,18,554	0/0:8,0:4:3.31:0,3,10	0/1:20,2:19:99:357,0,121	0/0:5,0:5:8.98:0,9,322	0/0:7,0:6:11.82:0,12,76	0/1:16,0:15:89.42:137,0,89	0/0:9,0:9:23.96:0,24,692	0/0:13,0:12:30.35:0,30,479	0/0:7,0:7:20.88:0,21,370	0/0:7,0:7:20.87:0,21,251	0/0:7,0:6:14.83:0,15,101	0/1:9,1:9:20.32:303,0,20	0/0:13,0:13:38.91:0,39,962	0/0:7,0:5:14.22:0,14,379	0/0:13,0:6:17.93:0,18,442	0/0:9,0:4:12:0,12,524	1/1:13,0:12:5.25:351,5,0	0/1:13,0:13:99:123,0,106	0/1:9,0:6:10.06:76,0,10	0/1:11,0:11:47.18:345,0,47	0/0:11,0:11:26.88:0,27,528	0/0:11,0:9:18.49:0,18,331	0/1:6,1:7:51.35:163,0,51	0/1:13,0:12:39.38:39,0,67	0/1:17,0:17:99:142,0,149	0/0:7,0:4:8.39:0,8,40
chr10	83442819	.	AAAAAAGAAGAAG	A	2590.17	PASS	AB=0.938;AC=17;AF=0.304;AN=56;BaseQRankSum=7.873;DP=296;FS=3.618;HRun=0;HaplotypeScore=91.4467;InbreedingCoeff=0.3720;MQ=42.33;MQ0=24;MQRankSum=-3.482;QD=19.19;ReadPosRankSum=4.225;VQSLOD=1.3009;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:7:0.47:0,0,1	0/0:8,0:7:20.89:0,21,564	0/0:14,0:9:18.50:0,18,508	0/0:9,0:5:5.51:0,6,108	0/1:19,3:19:11.36:470,0,11	0/0:5,0:5:6.02:0,6,285	0/0:7,0:6:4.52:0,5,24	0/1:16,0:15:36.78:195,0,37	0/0:9,0:9:23.87:0,24,634	0/0:13,0:12:24.38:0,24,394	0/0:7,0:7:17.85:0,18,308	0/0:7,0:7:16.90:0,17,173	0/0:7,0:6:4.88:0,5,20	1/1:6,4:9:11.61:380,12,0	0/0:13,0:13:38.83:0,39,857	0/0:7,0:5:13.51:0,14,330	0/0:14,0:7:20.84:0,21,419	0/0:9,0:4:11.99:0,12,481	1/1:13,0:12:26.56:470,27,0	0/1:11,2:13:61.41:194,0,61	1/1:8,0:6:5.87:104,6,0	1/1:5,6:11:1.07:484,1,0	0/0:11,0:11:26.81:0,27,474	0/0:10,0:9:18.48:0,18,324	1/1:4,3:7:3.48:189,3,0	0/1:13,0:12:6.42:54,0,6	0/1:15,1:16:90.60:210,0,91	1/1:6,0:4:0.94:2,1,0
chr10	83442820	.	AAAAAGAAGAAG	A	2594.63	PASS	AB=0.888;AC=18;AF=0.321;AN=56;BaseQRankSum=8.710;DP=292;FS=6.406;HRun=0;HaplotypeScore=86.4695;InbreedingCoeff=0.4086;MQ=42.82;MQ0=22;MQRankSum=-3.211;QD=18.53;ReadPosRankSum=5.113;VQSLOD=1.0801;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:7:0:0,0,0	0/0:8,0:7:17.21:0,17,486	0/0:13,0:9:16.93:0,17,485	0/0:9,0:5:5.81:0,6,111	0/1:20,2:19:4.95:430,0,5	0/0:5,0:5:6.02:0,6,262	0/1:7,0:6:13.38:15,0,13	1/1:14,1:14:4.84:234,5,0	0/0:9,0:9:17.95:0,18,558	0/0:13,0:12:20.89:0,21,355	0/0:7,0:7:17.76:0,18,281	0/0:7,0:7:16.07:0,16,160	0/0:7,0:6:4.24:0,4,28	1/1:10,0:9:11.79:321,12,0	0/0:13,0:13:35.76:0,36,769	0/0:7,0:5:9.88:0,10,291	0/0:14,0:8:20.84:0,21,423	0/0:9,0:5:12.04:0,12,491	1/1:4,8:11:26.95:523,27,0	0/1:13,0:13:10.13:200,0,10	1/1:8,0:6:5.94:104,6,0	1/1:11,0:11:14.86:409,15,0	0/0:9,0:9:23.77:0,24,411	0/0:10,0:9:15.05:0,15,295	0/1:7,0:7:14.09:150,0,14	0/1:5,0:13:59.77:94,0,60	0/1:12,4:16:30.86:247,0,31	1/1:2,0:4:8.63:45,9,0
chr10	83442824	.	AGAAGAAG	A	2366.27	PASS	AB=0.907;AC=24;AF=0.429;AN=56;BaseQRankSum=6.643;DP=223;FS=15.874;HRun=0;HaplotypeScore=57.5556;InbreedingCoeff=0.4618;MQ=51.60;MQ0=12;MQRankSum=-5.926;QD=20.40;ReadPosRankSum=2.553;VQSLOD=1.3764;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:0,6:6:0:0,0,0	0/1:7,0:7:22.32:22,0,282	0/0:16,0:11:21.76:0,22,609	0/0:11,0:7:11.25:0,11,288	0/1:15,1:13:12.08:297,0,12	0/0:4,0:4:9.03:0,9,234	1/1:7,0:6:6.02:107,6,0	1/1:8,3:10:12.04:236,12,0	0/0:9,0:9:27.09:0,27,683	0/0:7,0:6:11.56:0,12,326	0/0:10,0:10:22.24:0,22,587	0/0:4,0:4:1.89:0,2,71	1/1:1,3:4:0.37:1,0,0	1/1:5,0:5:12.04:227,12,0	0/0:9,0:9:20.94:0,21,534	0/0:8,0:6:10.87:0,11,297	0/0:8,0:4:11.99:0,12,276	0/0:8,0:5:15.05:0,15,426	1/1:10,0:9:27.04:469,27,0	1/1:7,0:7:1.08:142,1,0	1/1:6,0:4:9.03:173,9,0	1/1:8,0:8:18.02:305,18,0	0/0:5,0:5:8.83:0,9,187	0/0:8,0:8:20.60:0,21,352	0/1:5,0:5:9.47:105,0,9	0/1:11,0:10:55.66:185,0,56	0/1:9,0:9:8.38:160,0,8	1/1:4,0:4:9.03:119,9,0
chr10	83442870	.	CAA	C	1633.22	PASS	AB=0.763;AC=20;AF=0.357;AN=56;BaseQRankSum=16.247;DP=500;FS=106.014;HRun=3;HaplotypeScore=214.2058;InbreedingCoeff=-0.5570;MQ=82.00;MQ0=0;MQRankSum=-15.554;QD=4.83;ReadPosRankSum=4.130;VQSLOD=-0.3032;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,2:19:1.43:0,1,748	0/1:9,2:11:17.64:18,0,492	0/0:18,0:18:50.92:0,51,920	0/0:22,0:22:63.21:0,63,1179	0/1:21,7:28:65.47:65,0,1194	0/1:10,4:14:59.11:59,0,531	0/1:14,6:20:70.03:70,0,735	0/0:32,2:34:74.29:0,74,1757	0/1:13,11:24:99:202,0,719	0/1:11,9:20:99:152,0,611	0/0:17,2:19:27.09:0,27,952	0/1:8,6:14:99:108,0,402	0/1:8,3:11:47.67:48,0,337	0/1:9,6:15:99:107,0,419	0/1:10,11:21:99:191,0,549	0/1:12,8:20:99:139,0,623	0/0:12,1:13:14.15:0,14,706	0/1:6,2:8:26.95:27,0,342	0/1:13,3:16:25.02:25,0,614	0/1:9,3:12:39.53:40,0,452	0/0:15,0:15:39.13:0,39,792	0/1:12,6:18:99:105,0,502	0/1:9,4:13:35.81:36,0,505	0/0:20,2:22:35.18:0,35,1010	0/1:12,2:14:11.50:11,0,630	0/1:17,11:28:99:181,0,916	0/1:12,10:22:99:204,0,583	0/1:7,1:8:2.94:3,0,399
chr10	83442873	.	GA	G	562.58	PASS	AB=0.747;AC=17;AF=0.304;AN=56;BaseQRankSum=16.272;DP=509;FS=93.189;HRun=2;HaplotypeScore=208.2306;InbreedingCoeff=-0.4237;MQ=83.89;MQ0=0;MQRankSum=-15.352;QD=1.82;ReadPosRankSum=3.300;VQSLOD=-0.5505;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,2:19:16.06:0,16,595	0/0:10,2:12:4.69:0,5,421	0/0:19,0:19:54.18:0,54,819	0/0:24,0:24:54.18:0,54,939	0/1:22,7:29:3.52:4,0,973	0/1:12,4:16:17.41:17,0,480	0/1:14,6:20:17.78:18,0,570	0/0:31,2:33:80.85:0,81,1424	0/1:14,11:25:92.77:93,0,594	0/1:12,9:21:66.16:66,0,514	0/0:18,2:20:38.61:0,39,777	0/1:8,6:14:49.09:49,0,339	0/1:8,3:11:18.21:18,0,235	0/1:9,6:15:48.64:49,0,338	0/1:12,11:23:88.20:88,0,485	0/1:12,8:20:61.40:61,0,516	0/0:13,1:14:26.74:0,27,605	0/1:6,2:8:6.64:7,0,264	0/1:9,3:12:8.40:8,0,395	0/1:9,3:12:10.91:11,0,351	0/0:15,0:15:39.13:0,39,623	0/1:12,6:18:46.90:47,0,387	0/1:9,4:13:6.37:6,0,396	0/0:20,2:22:38.80:0,39,800	0/0:12,2:14:8.06:0,8,495	0/1:17,11:28:75.48:75,0,724	0/1:14,10:23:97.75:98,0,506	0/0:7,1:8:6.77:0,7,318
chr10	83442889	.	GAAACCATA	G	2736.19	PASS	AB=0.885;AC=19;AF=0.339;AN=56;BaseQRankSum=12.280;DP=575;FS=65.470;HRun=0;HaplotypeScore=284.0019;InbreedingCoeff=-0.5068;MQ=80.41;MQ0=1;MQRankSum=-11.882;QD=6.79;ReadPosRankSum=6.883;VQSLOD=0.0125;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,2:29:62.24:62,0,2894	0/1:13,1:14:31.49:31,0,1509	0/0:17,0:17:51.14:0,51,1916	0/0:21,0:21:60.19:0,60,2442	0/1:25,4:29:99:201,0,2738	0/1:14,2:16:99:102,0,1454	0/1:21,2:23:48.85:49,0,2120	0/0:32,0:32:90.30:0,90,3831	0/1:20,6:26:99:358,0,2107	0/1:23,1:24:16:16,0,1990	0/1:22,1:23:4.65:5,0,2593	0/1:11,3:14:99:179,0,1052	0/0:15,0:15:30.04:0,30,1321	0/1:14,2:16:99:107,0,1007	0/1:17,6:23:99:367,0,1641	0/1:20,3:23:99:158,0,1947	0/1:16,1:17:19.46:19,0,2121	0/1:7,1:8:44.58:45,0,795	0/1:20,3:23:99:149,0,2491	0/1:12,1:13:36.57:37,0,1281	0/0:19,0:19:51.18:0,51,2298	0/1:22,2:24:85.27:85,0,1788	0/0:15,0:15:30.10:0,30,1314	0/0:26,2:28:8.58:0,9,3244	0/0:16,0:16:36.08:0,36,1417	0/1:26,7:33:99:419,0,2671	0/1:16,8:23:99:508,0,1428	0/0:9,0:9:24.08:0,24,954
chr10	83442899	.	GGTC	G	1018.58	PASS	AB=0.845;AC=13;AF=0.232;AN=56;BaseQRankSum=12.307;DP=531;FS=68.068;HRun=0;HaplotypeScore=174.9430;InbreedingCoeff=-0.3074;MQ=82.02;MQ0=1;MQRankSum=-11.797;QD=4.21;ReadPosRankSum=7.493;VQSLOD=0.4270;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,2:28:11.69:0,12,1636	0/1:11,1:12:2.58:3,0,777	0/0:13,0:13:38.96:0,39,797	0/0:22,0:22:63.21:0,63,1435	0/1:23,4:27:73.11:73,0,1549	0/1:13,2:15:35.31:35,0,844	0/0:16,2:18:6.95:0,7,1136	0/0:34,0:34:99:0,102,2468	0/1:19,6:25:99:157,0,1329	0/0:17,1:18:20.80:0,21,1211	0/0:20,1:21:22.44:0,22,1350	0/1:11,3:14:74.04:74,0,768	0/0:14,0:14:33.11:0,33,773	0/1:11,2:13:43.36:43,0,588	0/1:14,6:20:99:172,0,925	0/1:14,3:17:65.01:65,0,979	0/0:18,1:19:15.47:0,15,1217	0/1:6,1:7:16.37:16,0,423	0/1:21,3:24:50.17:50,0,1456	0/0:14,1:15:4.34:0,4,918	0/0:23,0:23:66.23:0,66,1610	0/1:17,2:19:27.45:27,0,987	0/0:12,0:12:36.12:0,36,872	0/0:29,2:31:46.50:0,47,1957	0/0:12,0:12:33.11:0,33,797	0/1:22,7:29:99:195,0,1510	0/1:12,8:19:99:256,0,756	0/0:8,0:8:24.08:0,24,590
chr10	83443302	.	A	AG	22152.22	PASS	AB=0.826;AC=40;AF=0.714;AN=56;BaseQRankSum=3.106;DP=859;FS=11.586;HRun=0;HaplotypeScore=190.7366;InbreedingCoeff=-0.0575;MQ=79.10;MQ0=0;MQRankSum=-5.632;QD=26.79;ReadPosRankSum=0.110;VQSLOD=2.9132;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,47:48:99:1966,123,0	0/0:4,0:4:12.04:0,12,168	0/1:23,3:26:99:168,0,704	0/1:23,4:27:99:120,0,693	1/1:5,44:49:99:1819,114,0	0/1:23,7:30:99:110,0,882	1/1:1,34:35:93.32:1475,93,0	1/1:0,38:38:99:1676,105,0	0/1:28,10:38:99:322,0,1024	0/1:23,7:30:99:203,0,811	0/1:16,10:26:99:265,0,558	0/1:22,12:34:99:381,0,808	1/1:0,26:26:78.27:1245,78,0	1/1:0,24:24:57.19:910,57,0	0/1:23,5:28:99:155,0,864	0/1:28,5:33:94.91:95,0,1059	0/1:27,3:29:62.14:62,0,926	0/1:7,3:10:71.65:72,0,228	1/1:4,33:37:84.25:1296,84,0	1/1:2,31:33:81.28:1293,81,0	1/1:0,48:48:99:2062,129,0	1/1:1,23:24:63.21:1006,63,0	0/1:17,3:20:92.12:92,0,536	0/0:26,2:28:78.26:0,78,1091	1/1:1,27:28:75.26:1193,75,0	1/1:3,38:41:99:1626,102,0	1/1:2,44:46:99:1821,114,0	1/1:0,18:18:45.15:719,45,0
chr10	83443320	.	GGCTGCA	G	8101.04	PASS	AB=0.820;AC=26;AF=0.464;AN=56;BaseQRankSum=17.602;DP=764;FS=60.644;HRun=0;HaplotypeScore=262.2708;InbreedingCoeff=-0.8667;MQ=81.69;MQ0=0;MQRankSum=-13.412;QD=11.67;ReadPosRankSum=1.216;VQSLOD=2.3221;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:35,5:40:75.33:75,0,3368	0/1:5,1:6:58.67:59,0,546	0/1:18,6:26:99:484,0,1311	0/1:21,6:27:99:404,0,1333	0/1:27,15:42:99:431,0,2632	0/1:20,4:24:99:206,0,1975	0/1:24,7:31:99:453,0,2037	0/1:24,6:30:99:152,0,2380	0/1:19,9:28:99:606,0,2060	0/1:27,7:34:99:406,0,2557	0/1:17,10:27:99:541,0,1715	0/1:19,8:27:99:532,0,2031	0/1:16,5:21:99:320,0,1676	0/1:17,2:19:94.56:95,0,1737	0/1:24,4:28:99:223,0,2329	0/1:26,5:31:99:217,0,2656	0/1:28,3:31:63.11:63,0,3031	0/1:8,2:10:99:124,0,861	0/1:16,5:21:99:176,0,1467	0/1:24,13:37:99:668,0,2457	0/0:41,1:42:99:0,120,4217	0/1:20,5:25:99:314,0,1844	0/1:11,5:16:99:188,0,1096	0/0:28,0:28:84.29:0,84,3131	0/1:19,3:22:99:160,0,2000	0/1:18,9:27:99:462,0,1929	0/1:35,8:43:99:490,0,3094	0/1:17,4:21:99:253,0,1316
chr10	83443529	.	G	GTATATTA	14691.64	PASS	AB=0.817;AC=22;AF=0.393;AN=56;BaseQRankSum=19.595;DP=855;FS=104.601;HRun=0;HaplotypeScore=308.6343;InbreedingCoeff=-0.6471;MQ=80.37;MQ0=1;MQRankSum=-19.470;QD=20.58;ReadPosRankSum=7.338;VQSLOD=1.4207;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:44,5:49:99:366,0,3251	0/1:11,7:18:99:684,0,812	0/0:26,0:25:66.15:0,66,1641	0/0:25,0:25:69.11:0,69,1699	0/1:36,8:43:99:629,0,2665	0/1:30,10:40:99:936,0,2301	0/0:30,0:30:84.29:0,84,2349	0/0:24,0:24:72.23:0,72,1842	0/1:22,7:29:99:630,0,1525	0/1:37,12:49:99:1051,0,2806	0/1:28,6:34:99:525,0,2157	0/1:13,8:21:99:673,0,1031	0/1:21,3:24:99:244,0,1627	0/1:19,7:26:99:555,0,1375	0/1:41,18:59:99:1723,0,2994	0/1:22,9:31:99:857,0,1720	0/1:23,1:24:35.64:36,0,1743	0/0:12,0:12:33.11:0,33,902	0/1:22,2:24:99:144,0,1625	0/1:25,16:41:99:1361,0,1944	0/0:24,0:23:66.23:0,66,1811	0/1:27,10:36:99:736,0,2101	0/1:23,11:34:99:1052,0,1721	0/1:16,2:18:53.55:54,0,1258	0/1:20,9:29:99:865,0,1452	0/1:35,8:43:99:736,0,2696	0/1:27,8:34:99:744,0,2145	0/1:4,1:5:91.85:92,0,320
chr10	83443530	.	G	GTCCT	13704.30	PASS	AB=0.840;AC=23;AF=0.411;AN=56;BaseQRankSum=23.254;DP=968;FS=164.631;HRun=0;HaplotypeScore=387.6643;InbreedingCoeff=-0.7073;MQ=76.21;MQ0=1;MQRankSum=-22.517;QD=16.08;ReadPosRankSum=2.451;VQSLOD=1.4893;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:54,5:59:99:490,0,2485	0/1:11,7:18:99:480,0,575	0/0:26,0:25:41.71:0,42,1264	0/0:25,0:25:45.75:0,46,1280	0/1:41,8:48:99:518,0,2038	0/1:30,10:40:99:548,0,1706	0/1:35,0:35:99:250,0,1709	0/1:35,0:35:99:470,0,1258	0/1:21,7:30:99:409,0,1162	0/1:44,12:56:99:1179,0,2064	0/1:31,6:37:99:420,0,1651	0/1:18,8:26:99:676,0,746	0/1:29,3:32:99:484,0,1208	0/1:20,6:27:99:376,0,1060	0/1:47,18:65:99:1248,0,2287	0/1:27,9:36:99:828,0,1254	0/0:24,1:25:6.06:0,6,1304	0/0:15,0:15:33.11:0,33,692	0/1:25,2:27:99:252,0,1232	0/1:31,16:47:99:1165,0,1402	0/0:25,0:24:69.19:0,69,1404	0/1:34,10:43:99:882,0,1559	0/1:24,11:36:99:767,0,1279	0/1:21,2:23:99:189,0,944	0/1:20,9:29:99:516,0,1072	0/1:42,8:50:99:746,0,1994	0/1:35,8:42:99:692,0,1581	0/1:7,1:8:99:118,0,234
chr10	83444444	.	T	TGGA	741.21	PASS	AB=0.843;AC=11;AF=0.196;AN=56;BaseQRankSum=11.877;DP=837;FS=3.271;HRun=0;HaplotypeScore=160.0117;InbreedingCoeff=-0.2425;MQ=81.05;MQ0=0;MQRankSum=-11.806;QD=2.53;ReadPosRankSum=-2.071;VQSLOD=2.4700;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:57,9:66:94.83:0,95,2905	0/1:7,4:11:99:120,0,309	0/0:28,0:28:79.73:0,80,1285	0/0:28,0:28:77.51:0,78,1213	0/1:22,11:33:99:108,0,1093	0/0:22,0:22:60.21:0,60,1119	0/1:34,6:40:66.79:67,0,1726	0/1:24,4:28:99:126,0,1068	0/0:23,3:26:32.40:0,32,1194	0/1:33,7:40:34.40:34,0,1589	0/1:20,4:24:99:102,0,837	0/0:25,2:27:75.26:0,75,1395	0/0:28,1:29:84.27:0,84,1520	0/0:19,1:20:24.46:0,24,961	0/0:24,1:25:69.24:0,69,1280	0/1:18,0:18:22.57:23,0,844	0/0:34,2:36:99:0,102,1845	0/0:21,0:21:63.22:0,63,1158	0/0:25,1:26:32.34:0,32,1320	0/1:30,14:44:99:114,0,1534	0/0:39,4:43:49.72:0,50,2069	0/0:33,7:40:59.47:0,59,1680	0/1:14,6:20:62.32:62,0,682	0/0:38,2:40:82.58:0,83,2084	0/1:20,3:23:99:123,0,885	0/0:31,4:35:44.40:0,44,1524	0/0:30,2:32:20.63:0,21,1550	0/1:11,1:12:10.82:11,0,493
chr10	83444467	.	A	AT	671.59	PASS	AB=0.782;AC=9;AF=0.161;AN=56;BaseQRankSum=12.983;DP=882;FS=14.653;HRun=0;HaplotypeScore=129.5529;InbreedingCoeff=-0.1993;MQ=83.35;MQ0=0;MQRankSum=-12.881;QD=2.51;ReadPosRankSum=-0.368;VQSLOD=2.3521;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,6:56:91.57:0,92,1976	0/1:9,6:15:62.59:63,0,303	0/0:30,0:30:83.86:0,84,1133	0/0:33,0:33:93.14:0,93,1230	0/1:24,13:36:99:155,0,872	0/0:23,2:25:3.35:0,3,893	0/0:29,5:34:28.84:0,29,1108	0/1:26,6:32:99:153,0,782	0/0:28,3:31:81.27:0,81,1121	0/1:34,6:40:9.82:10,0,1260	0/1:17,12:29:99:170,0,608	0/0:29,2:31:87.28:0,87,1198	0/0:33,1:34:90.10:0,90,1217	0/0:21,2:23:35.97:0,36,846	0/0:28,2:30:78.26:0,78,1090	0/0:19,1:20:29.47:0,29,749	0/0:32,0:32:93.25:0,93,1241	0/0:24,0:24:72.18:0,72,962	0/1:23,5:28:34.17:34,0,726	0/1:30,11:41:31.58:32,0,1139	0/0:48,1:49:99:0,117,1982	0/0:37,7:44:11.16:0,11,1348	0/1:12,6:18:91.89:92,0,377	0/0:39,1:40:90.66:0,91,1586	0/1:20,8:28:99:103,0,721	0/0:27,3:30:53.47:0,53,1008	0/0:37,4:41:24.43:0,24,1363	0/0:7,0:7:21.07:0,21,293
chr10	83444908	.	TCACACACACACA	T	2744.46	PASS	AB=0.933;AC=9;AF=0.161;AN=56;BaseQRankSum=6.149;DP=864;FS=18.403;HRun=0;HaplotypeScore=377.1700;InbreedingCoeff=0.7389;MQ=66.29;MQ0=8;MQRankSum=-6.329;QD=20.64;ReadPosRankSum=1.818;VQSLOD=0.3295;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:43:38.93:0,39,1002	0/0:9,0:8:12.04:0,12,694	0/0:42,0:31:3.01:0,3,42	0/0:41,0:33:9.02:0,9,116	0/1:13,1:14:30.57:31,0,43	0/0:33,0:34:31.41:0,31,1022	0/0:28,0:36:45.07:0,45,1254	0/0:28,0:28:24.06:0,24,307	0/0:30,0:34:11.10:0,11,689	0/0:34,0:36:4.92:0,5,1714	0/0:12,0:12:11.86:0,12,282	0/0:31,0:33:39.09:0,39,1532	1/1:17,7:25:12.49:988,12,0	1/1:32,10:42:19.62:1049,20,0	0/0:35,0:35:26.17:0,26,2124	0/0:39,0:39:51.16:0,51,2203	0/0:34,0:36:51.18:0,51,2251	0/0:25,0:25:15.12:0,15,1135	0/0:29,0:28:10.95:0,11,375	0/0:18,0:20:27.56:0,28,796	0/0:63,0:62:60.68:0,61,1970	1/1:14,15:29:21.46:418,21,0	0/0:18,0:19:15.05:0,15,452	0/0:51,0:51:47.74:0,48,2952	1/1:18,4:22:20.85:418,21,0	0/0:26,0:28:39.02:0,39,790	0/0:20,0:27:32.82:0,33,1035	0/0:6,0:7:13.97:0,14,371
chr10	83445303	.	G	GA	600.20	PASS	AB=0.740;AC=2;AF=0.036;AN=56;BaseQRankSum=4.520;DP=1148;FS=1.525;HRun=4;HaplotypeScore=149.6039;InbreedingCoeff=-0.0370;MQ=82.23;MQ0=0;MQRankSum=0.729;QD=7.60;ReadPosRankSum=-1.845;VQSLOD=-0.1762;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:76,0:76:99:0,204,2257	0/0:23,0:23:69.20:0,69,781	0/0:41,0:41:54.54:0,55,748	0/0:31,0:30:53.04:0,53,600	0/0:31,0:31:58.86:0,59,868	0/0:41,0:41:99:0,120,1350	0/0:59,0:59:99:0,159,1780	0/0:55,0:55:99:0,141,1552	0/0:45,0:45:99:0,123,1393	0/0:42,0:42:99:0,111,1252	0/0:20,0:20:40.14:0,40,518	0/0:37,0:37:99:0,102,1146	0/0:33,0:33:87.24:0,87,980	0/0:45,0:45:99:0,129,1451	0/0:44,0:44:99:0,120,1350	0/0:43,0:43:99:0,111,1241	0/0:50,0:50:99:0,141,1558	0/0:31,0:31:90.14:0,90,969	0/0:41,0:41:99:0,117,1303	0/0:30,0:30:78.18:0,78,855	0/0:69,0:69:99:0,180,2013	0/0:36,0:35:78.22:0,78,881	0/0:19,0:19:42.10:0,42,464	0/0:45,0:45:99:0,117,1327	0/0:27,0:27:75.19:0,75,838	0/1:29,17:46:99:518,0,687	0/0:55,0:53:99:0,147,1630	0/1:22,11:33:99:171,0,557
chr10	83445388	.	TTAGACACTTTACCACC	T	1825.92	PASS	AB=0.806;AC=2;AF=0.036;AN=56;BaseQRankSum=6.331;DP=1067;FS=1.934;HRun=0;HaplotypeScore=529.8732;InbreedingCoeff=-0.0370;MQ=72.64;MQ0=0;MQRankSum=-6.132;QD=21.74;ReadPosRankSum=0.609;VQSLOD=-0.5266;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:49,10:59:99:997,0,9537	0/0:15,0:15:45.15:0,45,2996	0/0:30,0:30:90.24:0,90,5063	0/0:42,0:42:99:0,126,6784	0/0:33,0:33:81.22:0,81,5044	0/0:35,0:35:96.27:0,96,5861	0/1:17,8:25:99:918,0,3534	0/0:60,0:60:99:0,172,11208	0/0:44,0:44:99:0,123,7545	0/0:52,0:52:99:0,141,9064	0/0:25,0:25:66.23:0,66,4361	0/0:35,0:35:96.33:0,96,6558	0/0:33,0:33:93.26:0,93,5860	0/0:23,0:23:66.17:0,66,3870	0/0:51,0:51:99:0,144,8849	0/0:41,0:41:99:0,117,7426	0/0:48,0:48:99:0,138,9111	0/0:30,0:30:78.23:0,78,5226	0/0:39,0:38:99:0,99,5997	0/0:44,0:44:99:0,123,7426	0/0:46,0:46:99:0,123,6432	0/0:39,0:39:99:0,99,4564	0/0:33,0:33:81.09:0,81,4487	0/0:47,0:47:99:0,114,7525	0/0:27,0:27:72.06:0,72,4460	0/0:44,0:44:99:0,126,7534	0/0:52,0:51:99:0,151,9453	0/0:15,0:15:45.07:0,45,1881
chr10	83445447	.	A	AC	11478.48	PASS	AB=0.741;AC=28;AF=0.500;AN=56;BaseQRankSum=25.798;DP=1102;FS=48.305;HRun=0;HaplotypeScore=255.4778;InbreedingCoeff=-1.0000;MQ=71.36;MQ0=0;MQRankSum=-24.429;QD=10.42;ReadPosRankSum=-3.977;VQSLOD=2.6627;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:46,16:62:99:430,0,1630	0/1:14,8:22:99:256,0,476	0/1:22,0:23:37.48:37,0,575	0/1:20,6:26:47.64:48,0,569	0/1:25,15:40:99:216,0,876	0/1:21,16:37:99:460,0,742	0/1:29,18:47:99:544,0,1078	0/1:32,28:60:99:1117,0,866	0/1:14,21:35:99:688,0,474	0/1:35,14:49:99:335,0,1234	0/1:26,5:31:99:102,0,996	0/1:23,14:37:99:479,0,761	0/1:21,12:33:99:354,0,787	0/1:21,14:35:99:377,0,697	0/1:31,23:54:99:760,0,1105	0/1:19,18:37:99:607,0,636	0/1:44,15:59:99:302,0,1605	0/1:14,11:24:99:302,0,425	0/1:16,16:32:99:607,0,519	0/1:37,15:52:99:421,0,1310	0/1:30,8:38:97.88:98,0,1039	0/1:19,18:37:99:571,0,634	0/1:25,13:38:99:358,0,763	0/1:19,13:32:99:189,0,634	0/1:23,8:30:99:172,0,859	0/1:37,26:63:99:794,0,1303	0/1:35,19:54:99:653,0,1273	0/1:7,6:13:99:200,0,254
chr10	83445707	.	C	CAGAGG	3753.57	PASS	AB=0.898;AC=22;AF=0.393;AN=56;BaseQRankSum=14.220;DP=720;FS=64.903;HRun=0;HaplotypeScore=204.0320;InbreedingCoeff=-0.6445;MQ=81.73;MQ0=0;MQRankSum=-12.605;QD=6.32;ReadPosRankSum=3.546;VQSLOD=0.6673;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,2:44:99:209,0,2368	0/1:7,1:8:27.08:27,0,465	0/1:23,0:23:2.09:2,0,924	0/1:25,0:26:42.84:43,0,614	0/0:28,1:29:84.27:0,84,1866	0/1:27,7:34:99:355,0,1558	0/1:31,3:35:99:221,0,1695	0/1:25,0:25:99:251,0,715	0/1:21,7:28:99:368,0,1364	0/1:27,3:30:99:166,0,1674	0/0:20,1:21:60.20:0,60,1351	0/1:20,4:24:99:182,0,1261	0/1:17,1:18:28.21:28,0,1131	0/1:27,6:33:99:321,0,1585	0/1:28,4:32:99:154,0,1724	0/1:11,6:17:99:365,0,718	0/1:26,3:29:80.70:81,0,1589	0/1:15,1:16:13.50:13,0,782	0/1:31,1:32:19.20:19,0,1723	0/1:20,3:23:24.24:24,0,1145	0/1:31,1:32:99:164,0,1662	0/0:12,0:12:36.09:0,36,748	0/1:21,3:24:85.35:85,0,1166	0/0:28,1:29:2.08:0,2,1804	0/1:22,6:28:99:356,0,1327	0/0:25,3:28:75.22:0,75,1550	0/1:26,6:32:99:320,0,1565	0/0:7,0:7:21.07:0,21,488
chr10	83445717	.	T	TA	2971.91	PASS	AB=0.837;AC=23;AF=0.411;AN=56;BaseQRankSum=15.170;DP=791;FS=70.565;HRun=0;HaplotypeScore=153.8306;InbreedingCoeff=-0.6764;MQ=86.95;MQ0=0;MQRankSum=-13.455;QD=4.22;ReadPosRankSum=-0.549;VQSLOD=0.3732;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:44,6:50:57.75:58,0,1516	0/1:8,1:9:7:7,0,308	0/1:30,7:37:99:258,0,712	0/1:24,6:29:99:108,0,631	0/0:29,2:31:84.25:0,84,1138	0/1:25,10:35:99:159,0,783	0/1:28,4:32:60.46:60,0,1038	0/1:22,14:36:99:410,0,754	0/1:25,10:35:99:305,0,889	0/1:30,4:34:90.14:90,0,1039	0/0:21,1:22:60.20:0,60,838	0/1:21,7:28:99:160,0,786	0/1:16,4:20:43.95:44,0,571	0/1:25,11:36:99:287,0,854	0/1:28,4:32:55.38:55,0,986	0/1:12,9:21:99:279,0,407	0/1:25,5:30:99:106,0,922	0/0:15,1:16:34.28:0,34,536	0/1:30,3:33:78.81:79,0,1117	0/1:20,5:25:31.93:32,0,717	0/1:33,4:37:87.02:87,0,1154	0/0:9,1:10:24.08:0,24,336	0/1:18,3:21:27.29:27,0,655	0/1:28,3:31:4.87:5,0,1071	0/1:23,6:29:99:157,0,839	0/1:22,5:27:26.38:26,0,812	0/1:26,11:37:99:329,0,907	0/0:7,0:7:21.02:0,21,255
chr10	83445764	.	CA	C	5327.31	PASS	AB=0.805;AC=28;AF=0.500;AN=56;BaseQRankSum=20.918;DP=930;FS=84.506;HRun=1;HaplotypeScore=140.3900;InbreedingCoeff=-0.9709;MQ=97.80;MQ0=0;MQRankSum=-15.341;QD=5.73;ReadPosRankSum=0.589;VQSLOD=0.2624;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:45,14:59:99:370,0,1875	0/1:11,1:12:2.82:3,0,442	0/1:44,8:52:99:516,0,1244	0/1:38,11:50:98.80:99,0,1359	0/1:32,7:39:11.25:11,0,1403	0/1:25,10:35:99:176,0,1102	0/1:24,11:35:99:322,0,1023	0/1:28,13:41:99:383,0,1177	0/1:26,6:32:99:140,0,1082	0/1:33,12:45:99:302,0,1348	0/1:31,7:38:89.19:89,0,1333	0/1:20,5:25:88.40:88,0,819	0/1:13,8:21:99:176,0,562	0/1:21,8:29:99:152,0,926	0/1:22,9:31:99:257,0,916	0/1:13,9:22:99:248,0,560	0/1:24,7:31:99:182,0,1012	0/1:16,4:20:95.42:95,0,707	0/1:21,8:29:99:189,0,852	0/1:24,4:28:77.33:77,0,974	0/1:33,8:41:99:188,0,1459	0/1:20,6:25:99:119,0,877	0/1:24,13:37:99:358,0,1020	0/1:28,7:35:99:131,0,1241	0/1:21,5:26:80.23:80,0,882	0/1:30,11:41:99:239,0,1232	0/1:24,15:35:99:250,0,1047	0/1:8,3:11:86.61:87,0,296
chr10	83447069	.	CAT	C	5061.38	PASS	AB=0.809;AC=11;AF=0.220;AN=50;BaseQRankSum=12.282;DP=1169;FS=90.712;HRun=0;HaplotypeScore=115.1833;InbreedingCoeff=-0.2991;MQ=19.20;MQ0=681;MQRankSum=-0.565;QD=8.67;ReadPosRankSum=1.437;VQSLOD=0.8600;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:66,3:17:15.74:16,0,574	0/0:19,0:17:42.10:0,42,782	./.	./.	0/1:23,38:56:99:1092,0,255	0/0:22,0:13:21.07:0,21,425	0/1:38,2:13:67.57:68,0,448	0/0:42,0:8:24.08:0,24,486	0/0:29,0:15:15.05:0,15,304	0/0:23,0:12:36.12:0,36,711	0/0:15,0:14:17.94:0,18,331	0/0:27,0:13:24.08:0,24,486	0/1:58,10:18:99:309,0,210	0/1:80,9:19:99:120,0,337	0/0:33,0:13:24.08:0,24,486	0/0:30,0:14:27.09:0,27,541	./.	0/0:22,0:7:12.04:0,12,243	0/0:25,0:7:21.03:0,21,385	0/1:19,7:24:99:141,0,789	0/0:162,0:2:6.02:0,6,121	0/1:21,35:49:99:965,0,442	0/0:25,0:25:27.06:0,27,508	0/0:32,0:6:6.02:0,6,121	0/1:23,37:56:99:1476,0,594	0/1:51,21:35:99:731,0,659	0/1:19,3:15:61.60:62,0,572	0/1:19,2:8:82.86:83,0,147
chr10	83447345	.	T	TA	15966.66	PASS	AB=0.667;AC=14;AF=0.250;AN=56;BaseQRankSum=21.990;DP=1323;FS=8.896;HRun=0;HaplotypeScore=269.7025;InbreedingCoeff=-0.3334;MQ=60.10;MQ0=0;MQRankSum=-11.860;QD=15.25;ReadPosRankSum=2.025;VQSLOD=3.8009;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,34:64:99:1062,0,1028	0/0:11,0:11:33.11:0,33,454	0/0:37,0:35:99:0,101,1308	0/0:21,0:20:51.17:0,51,711	0/1:37,24:74:99:1113,0,662	0/0:22,0:22:66.21:0,66,907	0/1:25,18:43:99:509,0,893	0/1:29,19:48:99:617,0,982	0/0:15,0:15:42.14:0,42,586	0/0:14,0:14:42.13:0,42,571	0/0:15,0:15:42.14:0,42,586	0/0:19,0:19:57.18:0,57,775	0/1:43,42:108:99:1484,0,1217	0/1:42,30:92:99:1141,0,1233	0/0:16,0:16:45.15:0,45,625	0/0:12,0:12:36.10:0,36,485	0/0:36,0:35:99:0,102,1424	0/0:18,0:18:51.14:0,51,692	0/1:21,13:34:99:466,0,759	0/1:16,19:35:99:616,0,572	0/1:122,58:186:99:2002,0,4374	0/1:33,38:79:99:1681,0,443	0/0:20,0:20:54.14:0,54,709	0/0:20,0:20:57.17:0,57,777	0/1:37,31:95:99:1315,0,940	0/1:41,65:106:99:2664,0,1036	0/1:26,18:44:99:589,0,842	0/1:14,17:31:99:708,0,371
chr10	83448315	.	G	GT	512.90	PASS	AB=0.797;AC=5;AF=0.089;AN=56;BaseQRankSum=12.325;DP=932;FS=12.859;HRun=0;HaplotypeScore=138.9320;InbreedingCoeff=-0.0982;MQ=67.14;MQ0=6;MQRankSum=-12.166;QD=1.84;ReadPosRankSum=0.881;VQSLOD=2.2950;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,1368	0/0:21,0:21:63.18:0,63,830	0/0:21,0:17:39.12:0,39,528	0/0:26,0:25:72.21:0,72,971	0/1:45,19:51:81.11:81,0,1145	0/0:24,0:24:72.23:0,72,990	0/0:25,0:25:72.24:0,72,1006	0/0:34,0:31:84.28:0,84,1174	0/0:24,0:24:72.24:0,72,1006	0/0:37,0:37:99:0,111,1514	0/0:14,0:14:39.12:0,39,528	0/0:25,0:25:72.24:0,72,1006	0/1:27,12:39:99:140,0,830	0/1:28,7:35:64.27:64,0,831	0/0:26,0:26:75.25:0,75,1049	0/0:26,0:26:78.26:0,78,1089	0/0:40,0:39:99:0,114,1574	0/0:37,0:37:99:0,108,1472	0/0:19,0:17:51.17:0,51,712	0/0:34,0:31:84.28:0,84,1172	0/0:73,0:73:99:0,217,2942	0/1:49,10:54:21.61:22,0,1381	0/0:19,0:19:54.17:0,54,754	0/0:39,0:39:99:0,117,1626	0/1:54,26:51:99:323,0,910	0/0:23,0:22:57.17:0,57,778	0/0:24,0:24:72.24:0,72,1006	0/0:7,0:6:18.06:0,18,250
chr10	83448319	.	TTAGC	T	1369.74	PASS	AB=0.799;AC=5;AF=0.089;AN=56;BaseQRankSum=12.440;DP=942;FS=12.500;HRun=0;HaplotypeScore=187.5746;InbreedingCoeff=-0.0982;MQ=67.36;MQ0=6;MQRankSum=-11.682;QD=4.84;ReadPosRankSum=0.790;VQSLOD=1.6320;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,2953	0/0:20,0:20:60.21:0,60,1712	0/0:22,0:18:42.18:0,42,1404	0/0:26,0:25:75.21:0,75,1838	0/1:45,19:50:99:271,0,2389	0/0:27,0:27:81.28:0,81,2224	0/0:23,0:23:69.24:0,69,1965	0/0:33,0:30:81.27:0,81,2259	0/0:25,0:25:75.26:0,75,2172	0/0:37,0:37:99:0,111,3156	0/0:14,0:14:42.14:0,42,1215	0/0:24,0:24:72.25:0,72,2068	0/1:29,12:41:99:300,0,1990	0/1:27,7:33:99:175,0,1643	0/0:27,0:27:78.27:0,78,2197	0/0:27,0:27:81.28:0,81,2244	0/0:40,0:39:99:0,117,3246	0/0:38,0:38:99:0,114,3274	0/0:19,0:17:51.18:0,51,1442	0/0:33,0:30:87.30:0,87,2354	0/0:71,0:71:99:0,211,5967	0/1:52,10:54:99:124,0,2905	0/0:20,0:20:57.20:0,57,1650	0/0:40,0:40:99:0,120,3474	0/1:56,26:51:99:617,0,2122	0/0:23,0:22:57.20:0,57,1651	0/0:25,0:25:75.26:0,75,2110	0/0:8,0:7:21.07:0,21,607
chr10	83448926	.	G	GC	10014.51	PASS	AB=0.749;AC=14;AF=0.250;AN=56;BaseQRankSum=17.197;DP=1483;FS=7.581;HRun=2;HaplotypeScore=289.9731;InbreedingCoeff=-0.3336;MQ=52.48;MQ0=10;MQRankSum=-7.445;QD=8.55;ReadPosRankSum=-0.183;VQSLOD=1.7557;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:43,23:62:99:587,0,1172	0/0:12,0:12:30.09:0,30,368	0/0:16,0:10:21.85:0,22,280	0/0:16,0:12:35.12:0,35,393	0/1:68,40:90:99:724,0,796	0/0:24,0:24:72.23:0,72,892	0/1:29,11:30:99:172,0,699	0/1:32,14:46:99:380,0,959	0/0:24,0:24:72.21:0,72,879	0/0:38,0:38:96.27:0,96,1173	0/0:19,0:19:48.15:0,48,593	0/0:20,0:20:57.18:0,57,706	0/1:76,29:66:99:475,0,918	0/1:64,26:71:99:698,0,1026	0/0:26,0:26:78.22:0,78,940	0/0:24,0:23:72.23:0,72,892	0/0:25,0:25:75.24:0,75,929	0/0:22,0:22:63.20:0,63,779	0/1:25,10:33:99:321,0,721	0/1:37,19:54:99:328,0,1057	0/1:106,73:161:99:2246,0,1843	0/1:91,44:109:99:1099,0,1300	0/0:27,0:27:75.23:0,75,929	0/0:19,0:18:51.16:0,51,631	0/1:55,38:85:99:926,0,1215	0/1:85,41:94:99:1235,0,1473	0/1:30,14:33:99:218,0,579	0/1:27,20:44:99:606,0,597
chr10	83448930	.	GGA	G	1237.09	PASS	AB=0.775;AC=5;AF=0.089;AN=56;BaseQRankSum=11.586;DP=1441;FS=3.941;HRun=0;HaplotypeScore=326.7164;InbreedingCoeff=-0.0981;MQ=53.98;MQ0=14;MQRankSum=-10.916;QD=2.45;ReadPosRankSum=3.168;VQSLOD=1.8509;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:62,3:61:99:0,159,2918	0/0:11,0:11:33.10:0,33,633	0/0:20,0:15:45.15:0,45,876	0/0:14,0:11:33.11:0,33,598	0/1:70,33:85:99:351,0,1727	0/0:25,0:25:75.26:0,75,1505	0/0:34,8:30:90.31:0,90,1712	0/0:42,2:44:31.61:0,32,2047	0/0:25,0:25:75.24:0,75,1469	0/0:35,0:35:95.61:0,96,1946	0/0:17,0:17:51.16:0,51,1000	0/0:20,0:20:60.21:0,60,1219	0/1:64,37:66:99:185,0,1802	0/1:60,23:66:99:115,0,2289	0/0:26,0:26:78.26:0,78,1549	0/0:28,0:27:84.29:0,84,1707	0/0:25,0:25:75.26:0,75,1524	0/0:20,0:20:60.21:0,60,1185	0/0:33,1:33:99:0,99,1869	0/0:51,0:50:99:0,129,2275	0/0:163,9:154:99:0,382,6776	0/1:94,36:102:99:221,0,2990	0/0:25,0:25:75.26:0,75,1512	0/0:20,1:20:57.20:0,57,1141	0/1:68,19:79:99:483,0,2433	0/0:105,18:90:71.72:0,72,3637	0/0:35,11:35:87.30:0,87,1640	0/0:45,3:44:99:0,108,1801
chr10	83449141	.	G	GA	10656.43	PASS	AB=0.758;AC=15;AF=0.268;AN=56;BaseQRankSum=21.226;DP=1471;FS=60.131;HRun=0;HaplotypeScore=182.0436;InbreedingCoeff=-0.3658;MQ=47.87;MQ0=103;MQRankSum=-8.813;QD=9.51;ReadPosRankSum=-5.182;VQSLOD=2.3994;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:55,20:71:99:423,0,1785	0/0:7,0:7:15.05:0,15,210	0/1:29,1:5:51.06:51,0,52	0/1:31,0:9:44.90:45,0,81	0/1:43,36:58:99:1070,0,658	0/0:20,0:20:60.18:0,60,807	0/1:42,12:44:27.07:27,0,1143	0/0:63,14:51:51.64:0,52,1811	0/0:29,0:29:84.26:0,84,1138	0/0:28,0:28:84.27:0,84,1159	0/0:12,0:12:33.07:0,33,410	0/0:23,0:23:65.93:0,66,905	0/1:38,53:82:99:2329,0,565	0/1:35,71:93:99:2002,0,545	0/0:31,0:31:93.29:0,93,1269	0/0:23,0:23:69.22:0,69,948	0/0:31,0:31:90.29:0,90,1241	0/0:31,0:31:90.30:0,90,1255	0/1:33,6:28:87.61:88,0,792	0/1:38,11:44:99:245,0,873	0/1:173,27:170:14.86:15,0,4271	0/1:32,36:56:99:1030,0,322	0/0:15,0:15:33.08:0,33,439	0/0:24,0:24:66.21:0,66,907	0/1:46,37:58:99:697,0,660	0/1:54,75:96:99:2126,0,1227	0/1:25,13:29:99:132,0,592	0/1:10,14:22:99:377,0,323
chr10	83449701	.	T	TG	8765.54	PASS	AB=0.766;AC=11;AF=0.196;AN=56;BaseQRankSum=7.081;DP=1731;FS=14.119;HRun=1;HaplotypeScore=320.8156;InbreedingCoeff=-0.2445;MQ=68.40;MQ0=10;MQRankSum=-2.025;QD=8.23;ReadPosRankSum=1.751;VQSLOD=0.4594;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:39,33:72:99:1166,0,1201	0/0:15,0:15:45.15:0,45,584	0/0:36,0:36:96.29:0,96,1228	0/0:20,0:20:48.15:0,48,609	0/1:138,24:148:99:675,0,3377	0/0:10,0:10:30.05:0,30,371	0/1:26,23:48:99:798,0,799	0/1:33,29:61:99:1132,0,908	0/0:20,0:20:60.20:0,60,778	0/0:27,0:27:81.26:0,81,1052	0/0:24,0:24:66.15:0,66,829	0/0:20,0:20:60.20:0,60,778	0/1:116,16:121:99:297,0,3382	0/1:114,20:128:99:409,0,3067	0/0:19,0:19:57.19:0,57,740	0/0:28,0:28:78.24:0,78,998	0/0:29,0:29:84.27:0,84,1091	0/0:18,0:18:51.17:0,51,661	0/1:28,21:46:99:882,0,614	0/1:25,23:48:99:818,0,692	0/0:155,0:153:99:0,430,5546	0/1:123,40:154:99:1328,0,3259	0/0:28,0:28:84.27:0,84,1090	0/0:13,0:13:36.12:0,36,467	0/1:117,16:131:99:277,0,3630	0/0:149,0:136:99:0,370,4762	0/1:32,29:60:99:984,0,962	0/0:55,0:48:99:0,132,1709
chr10	83450013	.	A	AC	29109.41	PASS	AB=0.657;AC=14;AF=0.250;AN=56;BaseQRankSum=27.347;DP=1803;FS=5.046;HRun=0;HaplotypeScore=346.1046;InbreedingCoeff=-0.3338;MQ=62.56;MQ0=7;MQRankSum=-13.082;QD=19.88;ReadPosRankSum=-1.042;VQSLOD=2.9044;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:46,70:115:99:2774,0,1517	0/0:6,0:6:18.06:0,18,252	0/0:24,0:24:72.22:0,72,966	0/0:27,0:26:63.17:0,63,851	0/1:51,86:128:99:3121,0,1217	0/0:28,0:28:84.28:0,84,1170	0/1:34,35:68:99:1267,0,1115	0/1:33,36:64:99:1202,0,1038	0/0:19,0:19:54.16:0,54,724	0/0:28,0:28:84.28:0,84,1171	0/0:16,0:16:48.15:0,48,654	0/0:12,0:12:36.12:0,36,503	0/1:52,79:126:99:2562,0,1484	0/1:46,93:137:99:3443,0,1258	0/0:33,0:33:99:0,99,1366	0/0:28,0:28:81.26:0,81,1115	0/0:38,0:38:99:0,114,1557	0/0:23,0:23:66.22:0,66,921	0/1:31,12:43:99:625,0,792	0/1:20,23:42:99:1009,0,577	0/1:98,127:224:99:4562,0,2928	0/1:59,81:132:99:3064,0,1509	0/0:26,0:26:72.23:0,72,970	0/0:31,0:31:90.28:0,90,1227	0/1:42,61:88:99:1642,0,1052	0/1:94,53:144:99:1933,0,3175	0/1:28,29:57:99:1171,0,1006	0/1:24,21:42:99:735,0,877
chr10	83451051	.	C	CT	5412.71	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=14.966;DP=774;FS=63.872;HRun=6;HaplotypeScore=110.5046;InbreedingCoeff=0.9763;MQ=48.26;MQ0=83;MQRankSum=-3.124;QD=12.92;ReadPosRankSum=0.305;VQSLOD=-0.0243;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:49,3:51:99:827,109,0	0/0:4,0:4:6.01:0,6,61	0/0:35,0:12:13:0,13,212	0/0:53,0:12:12:0,12,150	1/1:14,2:12:31.79:275,32,0	0/0:17,0:17:51.11:0,51,519	1/1:18,1:16:36.21:307,36,0	1/1:31,2:21:41.09:409,41,0	0/0:16,0:13:36.06:0,36,360	0/0:28,0:26:66.14:0,66,673	0/0:32,0:30:74.85:0,75,762	0/0:18,0:17:51.11:0,51,519	1/1:35,1:26:31.65:385,32,0	1/1:24,0:18:37.07:268,37,0	0/0:21,0:21:48.10:0,48,489	0/0:20,0:19:60.14:0,60,612	0/0:38,0:36:75.02:0,75,953	0/0:23,0:23:60.11:0,60,603	1/1:36,4:24:42.96:425,43,0	1/1:24,2:16:40.31:347,40,0	1/1:24,1:15:18.05:198,18,0	1/1:18,0:14:28.57:243,29,0	0/0:20,0:19:39.08:0,39,396	0/0:30,0:30:78.17:0,78,794	1/1:26,0:17:31.25:247,31,0	1/1:15,27:30:74.19:767,74,0	1/1:33,2:25:52.36:449,52,0	1/1:9,4:12:24.04:266,24,0
chr10	83451063	.	TTC	T	1047.74	PASS	AB=0.963;AC=18;AF=0.321;AN=56;BaseQRankSum=11.996;DP=738;FS=34.752;HRun=0;HaplotypeScore=138.7709;InbreedingCoeff=-0.0419;MQ=51.58;MQ0=49;MQRankSum=-1.875;QD=2.49;ReadPosRankSum=-2.004;VQSLOD=1.1362;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:50,2:48:42.52:43,0,125	0/0:3,0:3:9.02:0,9,120	0/1:35,0:13:0.73:1,0,120	0/0:45,0:12:16.27:0,16,201	0/1:20,0:16:51.59:71,0,52	0/0:20,0:20:59.28:0,59,718	0/1:16,3:15:25.52:142,0,26	0/1:34,1:21:16.45:52,0,16	0/0:14,0:13:39.11:0,39,562	0/0:23,0:23:69.18:0,69,942	0/0:34,0:34:92.71:0,93,1201	0/0:17,0:16:41.94:0,42,536	0/1:35,2:26:47.16:107,0,47	1/1:19,2:15:3:152,3,0	0/0:19,0:19:56.78:0,57,766	0/0:26,0:25:77.92:0,78,1100	0/0:43,0:43:99:0,126,1755	0/0:24,0:24:66.92:0,67,997	0/1:34,0:22:26.69:27,0,55	0/1:27,0:20:6.91:7,0,82	1/1:14,0:9:17.26:116,17,0	0/1:15,1:16:18.71:102,0,19	0/0:19,0:19:45.01:0,45,634	0/0:30,0:30:90.22:0,90,1333	1/1:20,1:16:1.25:118,1,0	0/1:36,4:29:99:147,0,326	0/1:38,2:31:99:108,0,99	0/1:10,0:9:17.51:18,0,100
chr10	83451065	.	CT	C	1254.15	PASS	AB=0.953;AC=18;AF=0.321;AN=56;BaseQRankSum=7.734;DP=728;FS=0.000;HRun=11;HaplotypeScore=128.7753;InbreedingCoeff=0.2561;MQ=52.79;MQ0=40;MQRankSum=-1.934;QD=3.62;ReadPosRankSum=-0.457;VQSLOD=1.0109;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:50,1:48:1.38:301,1,0	0/0:2,0:3:8.86:0,9,78	0/0:35,0:14:4.27:0,4,71	0/0:43,1:12:8.51:0,9,69	0/1:18,1:16:14.17:73,0,14	0/1:17,2:19:25.22:25,0,348	0/1:20,0:15:21.30:57,0,21	1/1:34,0:21:7.78:155,8,0	0/0:13,0:13:35.89:0,36,355	0/0:22,0:22:54.06:0,54,543	0/0:32,1:34:47.35:0,47,681	0/0:16,0:15:27.06:0,27,282	0/1:34,0:25:5.84:101,0,6	0/1:21,1:16:40.78:41,0,62	0/0:20,1:21:28.81:0,29,475	0/0:25,1:25:44.44:0,44,647	0/0:42,0:43:99:0,111,1132	0/0:23,0:24:41.35:0,41,609	0/1:26,0:19:40.87:121,0,41	0/1:26,1:21:18.30:94,0,18	1/1:14,0:9:8.41:41,8,0	1/1:15,1:16:11.48:110,11,0	0/0:19,0:19:39.06:0,39,397	0/0:31,0:31:90.12:0,90,920	1/1:21,0:17:18.83:117,19,0	0/0:39,0:30:43.58:0,44,463	0/1:38,2:31:29.80:194,0,30	0/0:11,0:10:9.54:0,10,170
chr10	83451570	.	A	AT	1868.92	PASS	AB=0.836;AC=17;AF=0.304;AN=56;BaseQRankSum=4.838;DP=1091;FS=11.090;HRun=3;HaplotypeScore=97.6022;InbreedingCoeff=0.5140;MQ=41.45;MQ0=108;MQRankSum=-6.158;QD=3.87;ReadPosRankSum=-0.740;VQSLOD=-0.7037;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,31:30:27.09:378,27,0	0/0:6,0:6:18.05:0,18,214	0/0:29,0:12:33.10:0,33,386	0/0:26,0:10:30.09:0,30,349	0/1:60,11:48:48.58:49,0,438	0/0:16,0:16:33.10:0,33,396	1/1:0,12:5:12:146,12,0	1/1:3,8:3:3.01:42,3,0	0/0:39,0:39:90.24:0,90,1052	0/0:29,0:29:81.23:0,81,951	0/0:21,0:20:36.11:0,36,432	0/0:44,0:44:93.27:0,93,1114	0/1:60,18:52:99:297,0,680	0/1:55,23:53:99:295,0,661	0/0:31,0:31:63.19:0,63,754	0/0:25,0:25:54.16:0,54,647	0/0:37,0:37:99:0,99,1173	0/0:28,0:28:75.23:0,75,900	1/1:3,8:8:18.06:252,18,0	1/1:6,11:11:6.02:84,6,0	0/0:93,1:82:99:0,107,1273	0/1:64,15:44:76.59:77,0,384	0/0:18,0:17:39.12:0,39,466	0/0:36,0:36:96.28:0,96,1139	0/1:62,9:47:99:142,0,315	0/0:83,11:62:99:0,105,1675	1/1:0,20:15:21.07:294,21,0	0/0:34,1:25:36.11:0,36,432
chr10	83452371	.	TC	T	204.30	PASS	AB=0.728;AC=1;AF=0.018;AN=56;BaseQRankSum=3.539;DP=1591;DS;FS=0.000;HRun=4;HaplotypeScore=129.5419;InbreedingCoeff=-0.0224;MQ=40.57;MQ0=331;MQRankSum=-5.710;QD=3.46;ReadPosRankSum=-1.468;VQSLOD=-0.6706;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:79,31:69:99:0,175,2367	0/0:9,0:9:24.08:0,24,336	0/0:31,0:3:9.03:0,9,119	0/0:31,0:5:9.03:0,9,117	0/0:93,18:71:27.45:0,27,1211	0/0:16,0:16:45.15:0,45,630	0/0:27,10:27:63.15:0,63,841	0/1:37,22:33:99:279,0,615	0/0:21,0:21:57.19:0,57,798	0/0:37,0:34:99:0,99,1373	0/0:27,0:25:60.20:0,60,839	0/0:25,0:25:72.21:0,72,964	0/0:96,4:63:99:0,126,1751	0/0:87,6:56:87.43:0,87,1611	0/0:23,0:23:69.23:0,69,965	0/0:17,0:16:48.15:0,48,655	0/0:39,0:39:99:0,114,1595	0/0:21,0:21:54.17:0,54,739	0/0:42,7:16:45.11:0,45,608	0/0:30,8:27:30.24:0,30,845	0/0:234,16:154:99:0,277,3736	0/0:82,9:59:96.28:0,96,1318	0/0:23,0:22:51.13:0,51,686	0/0:38,0:36:99:0,105,1451	0/0:94,6:43:80.93:0,81,1086	0/0:106,0:62:99:0,172,2370	0/0:40,11:42:72.45:0,72,1237	0/0:38,0:26:50.96:0,51,712
chr10	83452897	.	T	TA	311.88	PASS	AB=0.835;AC=5;AF=0.096;AN=52;BaseQRankSum=0.259;DP=1610;FS=5.082;HRun=0;HaplotypeScore=90.2034;InbreedingCoeff=-0.1150;MQ=22.76;MQ0=838;MQRankSum=-2.892;QD=0.59;ReadPosRankSum=2.981;VQSLOD=0.6697;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:22:45.15:0,45,626	0/0:10,0:9:18.06:0,18,246	./.	./.	0/1:81,23:58:29.23:29,0,765	0/0:19,0:12:11.97:0,12,144	0/0:60,0:19:12.04:0,12,167	0/0:45,0:3:9.03:0,9,126	0/0:29,0:20:27.08:0,27,361	0/0:34,0:25:75.23:0,75,1018	0/0:18,0:18:27.02:0,27,347	0/0:23,1:17:30.04:0,30,380	0/1:90,23:39:56.57:57,0,399	0/1:91,41:37:11.62:12,0,419	0/0:35,0:26:33.11:0,33,460	0/0:19,0:10:14.98:0,15,171	0/0:48,0:31:29.99:0,30,373	0/0:21,0:9:24.05:0,24,314	0/0:44,0:7:21.07:0,21,294	0/0:37,0:17:30.07:0,30,395	0/0:183,0:27:38.98:0,39,496	0/0:86,24:56:9.45:0,9,704	0/0:18,0:18:18.06:0,18,246	0/0:34,0:15:27.09:0,27,377	0/0:100,21:42:42.14:0,42,586	0/1:111,24:47:99:302,0,1256	0/0:45,0:23:17.90:0,18,210	0/1:38,4:13:26.83:27,0,204
chr10	83454507	.	CCA	C	3823.04	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=2.659;DP=1872;DS;FS=0.896;HRun=0;HaplotypeScore=145.6255;InbreedingCoeff=0.9872;MQ=34.66;MQ0=483;MQRankSum=-0.671;QD=11.76;ReadPosRankSum=-0.809;VQSLOD=3.4667;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,51:51:66.22:1010,66,0	0/0:17,0:17:48.16:0,48,894	0/0:39,0:5:15.05:0,15,263	0/0:30,0:6:18.06:0,18,326	0/0:168,0:98:99:0,99,1884	0/0:15,0:15:39.13:0,39,752	1/1:26,23:22:18.06:276,18,0	1/1:51,30:18:54.18:819,54,0	0/0:22,0:22:42.03:0,42,793	0/0:29,0:29:87.30:0,87,1680	0/0:18,0:17:36.12:0,36,695	0/0:27,0:27:72.25:0,72,1388	0/0:105,0:65:61.77:0,62,1129	0/0:110,0:65:69.23:0,69,1278	0/0:31,0:31:78.15:0,78,1453	0/0:32,0:32:78.27:0,78,1482	0/0:29,0:29:69.24:0,69,1332	0/0:22,0:22:60.20:0,60,1134	1/1:12,21:20:57.19:857,57,0	1/1:20,13:16:12.04:184,12,0	0/0:250,0:167:99:0,162,2913	0/0:134,0:68:78.27:0,78,1503	0/0:24,0:24:48.16:0,48,927	0/0:40,0:40:99:0,108,2052	0/0:141,0:89:99:0,102,1945	0/0:177,1:89:99:0,198,4488	1/1:16,34:38:44.79:678,45,0	0/0:86,0:41:42.14:0,42,811
chr10	83454865	.	C	CT	5086.13	PASS	AB=0.752;AC=13;AF=0.260;AN=50;BaseQRankSum=13.310;DP=1427;DS;FS=28.994;HRun=2;HaplotypeScore=215.7128;InbreedingCoeff=-0.0401;MQ=40.78;MQ0=76;MQRankSum=-8.115;QD=4.82;ReadPosRankSum=-1.957;VQSLOD=-0.7390;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:9,0:9:24.06:0,24,285	0/0:34,0:6:18.06:0,18,223	0/0:28,0:6:18.01:0,18,206	0/1:65,46:76:99:671,0,862	0/0:18,0:18:45.14:0,45,558	1/1:6,7:5:3.01:42,3,0	./.	0/0:23,0:23:54.17:0,54,669	0/0:29,0:28:81.22:0,81,988	0/0:23,0:23:57.16:0,57,706	0/0:27,0:27:66.21:0,66,818	0/1:80,61:104:99:1055,0,1631	0/1:76,54:102:99:1144,0,1572	0/0:27,0:27:75.24:0,75,929	0/0:34,0:34:93.11:0,93,1139	0/0:30,0:30:81.21:0,81,986	0/0:19,0:19:54.16:0,54,657	./.	0/1:5,6:3:13.96:14,0,31	0/1:195,55:213:99:409,0,4389	0/1:71,43:85:99:879,0,845	0/0:16,0:16:39.12:0,39,483	0/0:30,0:30:84.23:0,84,1025	0/1:58,28:72:99:530,0,1180	0/1:121,16:111:99:225,0,2394	1/1:4,18:3:3.01:42,3,0	0/1:30,9:30:75.35:75,0,504
chr10	83455302	.	A	AG	1355.41	PASS	AB=0.708;AC=10;AF=0.179;AN=56;BaseQRankSum=10.213;DP=873;FS=3.785;HRun=0;HaplotypeScore=93.5951;InbreedingCoeff=-0.2187;MQ=53.98;MQ0=22;MQRankSum=-11.078;QD=3.23;ReadPosRankSum=-0.743;VQSLOD=2.5582;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,7:40:99:0,102,1405	0/0:8,0:8:15.05:0,15,207	0/0:23,0:13:36.11:0,36,472	0/0:29,0:15:45.10:0,45,588	0/0:20,29:26:42.12:0,42,567	0/0:12,2:12:36.11:0,36,485	0/0:39,10:43:60.53:0,61,1385	0/1:17,8:25:86.37:86,0,614	0/0:27,1:28:75.23:0,75,1017	0/1:17,4:19:38.67:39,0,656	0/0:11,0:11:27.05:0,27,355	0/0:19,1:19:57.19:0,57,796	0/1:22,28:37:99:246,0,758	0/1:19,34:28:99:169,0,686	0/0:21,3:21:60.19:0,60,822	0/0:25,3:26:30.39:0,30,955	0/0:34,3:36:99:0,99,1346	0/0:25,1:25:69.23:0,69,965	0/1:25,5:29:99:117,0,791	0/0:8,4:6:15.02:0,15,189	0/1:43,10:49:5.04:5,0,1644	0/1:11,26:16:99:107,0,341	0/0:8,0:8:9.03:0,9,126	0/0:33,0:33:96.30:0,96,1307	0/1:20,33:28:99:277,0,431	0/1:21,34:32:99:386,0,732	0/1:25,17:27:64.75:65,0,887	0/0:3,7:4:9.03:0,9,126
chr10	83455508	.	T	TC	2355.81	PASS	AB=0.815;AC=11;AF=0.196;AN=56;BaseQRankSum=4.451;DP=1369;FS=7.147;HRun=0;HaplotypeScore=195.0353;InbreedingCoeff=-0.2404;MQ=45.15;MQ0=65;MQRankSum=-9.073;QD=3.00;ReadPosRankSum=-3.037;VQSLOD=1.9569;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:70,1:72:47.31:0,47,1006	0/0:8,0:10:26.94:0,27,291	0/0:15,0:18:13.91:0,14,334	0/1:10,0:11:0.77:1,0,111	0/1:47,14:48:70.11:70,0,786	0/0:23,0:24:48.15:0,48,648	0/1:42,8:51:99:202,0,908	0/1:81,17:95:99:887,0,608	0/0:24,0:26:60.14:0,60,758	0/0:19,0:22:53.66:0,54,612	0/0:30,0:35:74.29:0,74,897	0/0:15,0:20:23.33:0,23,406	0/1:45,4:39:16.68:17,0,632	0/0:39,5:37:32.40:0,32,569	0/0:20,0:21:54.10:0,54,659	0/0:24,0:28:47.62:0,48,738	0/0:35,0:36:87.24:0,87,1161	0/0:19,0:23:57.08:0,57,696	0/1:44,5:42:99:171,0,576	0/1:50,8:54:57.27:57,0,846	0/1:37,18:61:99:778,0,134	0/0:52,12:47:4.09:0,4,797	0/0:21,0:23:54.13:0,54,701	0/0:35,0:38:94.02:0,94,1220	0/1:37,14:48:99:207,0,524	0/1:100,8:76:25.22:25,0,1446	0/1:50,12:44:83.43:83,0,714	0/0:34,2:26:22.47:0,22,553
chr10	83456308	.	T	TG	4045.75	PASS	AB=0.687;AC=7;AF=0.125;AN=56;BaseQRankSum=-8.319;DP=888;DS;FS=1.216;HRun=5;HaplotypeScore=108.1926;InbreedingCoeff=0.5023;MQ=61.35;MQ0=48;MQRankSum=0.499;QD=15.50;ReadPosRankSum=0.088;VQSLOD=2.9342;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:99:0,108,1148	0/0:7,0:7:21.05:0,21,225	0/0:19,0:15:41.91:0,42,415	0/0:24,0:18:47.78:0,48,468	1/1:29,16:28:15.97:517,16,0	0/0:25,0:25:60.14:0,60,645	0/0:32,0:30:84.21:0,84,903	0/0:34,0:29:78.20:0,78,838	0/0:36,0:35:99:0,102,1078	0/0:31,0:31:78.18:0,78,833	0/0:13,0:13:27.06:0,27,290	0/0:18,0:18:48.10:0,48,504	0/1:20,27:41:29.30:959,0,29	0/1:26,31:40:54.23:1112,0,54	0/0:27,0:27:78.20:0,78,838	0/0:19,0:19:51.13:0,51,548	0/0:28,0:28:75.19:0,75,806	0/0:22,0:22:60.13:0,60,636	0/0:26,0:21:54.13:0,54,579	0/0:23,0:14:39.08:0,39,410	0/0:68,0:60:99:0,113,974	1/1:18,24:33:22.56:722,23,0	0/0:25,0:24:48.10:0,48,507	0/0:23,0:23:69.17:0,69,741	0/1:50,20:42:58.87:736,0,59	0/0:50,0:39:87.65:0,88,772	0/0:26,0:23:63.16:0,63,676	0/0:10,0:9:24.06:0,24,257
chr10	83456315	.	C	CA	1163.31	PASS	AB=0.743;AC=5;AF=0.089;AN=56;BaseQRankSum=10.564;DP=826;FS=9.180;HRun=0;HaplotypeScore=113.1401;InbreedingCoeff=-0.1040;MQ=64.30;MQ0=15;MQRankSum=-10.356;QD=4.99;ReadPosRankSum=2.457;VQSLOD=2.9658;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:44:99:0,126,1758	0/0:7,0:7:21.05:0,21,275	0/0:18,0:15:4.59:0,5,461	0/0:20,0:19:45.20:0,45,586	0/0:24,9:23:16.17:0,16,322	0/0:27,0:27:77.82:0,78,1024	0/0:30,1:30:90.28:0,90,1239	0/0:36,0:36:99:0,102,1395	0/0:35,0:34:99:0,99,1384	0/0:31,0:31:87.27:0,87,1174	0/0:12,0:12:33.10:0,33,444	0/0:16,0:16:48.16:0,48,671	0/1:33,10:39:99:100,0,855	0/0:39,18:40:69.09:0,69,1097	0/0:27,0:27:78.26:0,78,1090	0/0:17,0:17:51.16:0,51,697	0/0:28,0:28:84.28:0,84,1173	0/0:20,0:20:60.20:0,60,839	0/0:24,0:24:69.18:0,69,909	0/0:16,8:16:45.11:0,45,603	0/1:30,17:45:99:454,0,1072	0/1:30,5:30:17.22:17,0,488	0/0:28,0:28:56.71:0,57,727	0/0:24,0:24:72.24:0,72,1007	0/1:29,34:38:99:290,0,534	0/1:21,22:34:99:419,0,685	0/0:23,1:23:66.22:0,66,922	0/0:8,0:8:24.08:0,24,336
chr10	83457034	.	G	GC	5538	PASS	AB=0.663;AC=14;AF=0.250;AN=56;BaseQRankSum=15.821;DP=1558;FS=1.372;HRun=2;HaplotypeScore=140.7375;InbreedingCoeff=-0.3399;MQ=40.27;MQ0=378;MQRankSum=-16.641;QD=4.44;ReadPosRankSum=-0.785;VQSLOD=1.3460;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:65,30:82:99:278,0,1703	0/0:8,0:8:21.07:0,21,260	0/0:28,0:4:9.02:0,9,101	0/0:24,0:7:10.19:0,10,131	0/1:45,70:87:99:506,0,886	0/0:29,0:29:75.23:0,75,923	0/1:36,19:35:98.17:98,0,603	0/1:41,4:34:81.92:82,0,699	0/0:19,0:19:57.18:0,57,704	0/0:26,0:25:72.22:0,72,883	0/0:18,0:18:36.11:0,36,445	0/0:30,0:30:87.27:0,87,1078	0/1:39,39:54:99:310,0,853	0/1:21,44:41:99:136,0,539	0/0:18,0:18:51.16:0,51,632	0/0:25,0:25:72.23:0,72,893	0/0:28,0:27:75.23:0,75,930	0/0:19,0:19:54.13:0,54,652	0/1:38,7:24:99:103,0,627	0/1:30,9:30:43.80:44,0,706	0/1:38,111:100:99:726,0,450	0/1:38,63:72:99:547,0,426	0/0:22,0:22:57.18:0,57,705	0/0:16,0:16:45.11:0,45,531	0/1:30,56:56:99:409,0,442	0/1:39,119:93:99:2089,0,846	0/1:33,5:36:99:107,0,873	0/1:13,60:37:99:102,0,196
chr10	83457104	.	GC	G	3836.91	PASS	AB=0.829;AC=7;AF=0.125;AN=56;BaseQRankSum=6.971;DP=2004;DS;FS=0.687;HRun=2;HaplotypeScore=234.9545;InbreedingCoeff=-0.1470;MQ=41.05;MQ0=214;MQRankSum=7.688;QD=4.75;ReadPosRankSum=-1.825;VQSLOD=-0.4569;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:94,43:119:99:1170,0,1609	0/0:7,0:7:21.07:0,21,312	0/0:30,0:4:12.04:0,12,171	0/0:18,0:3:9.03:0,9,126	0/0:115,0:89:99:0,126,1873	0/0:34,0:34:93.29:0,93,1349	0/1:73,26:71:99:811,0,615	0/1:83,22:85:99:469,0,2545	0/0:19,0:19:57.19:0,57,854	0/0:30,0:29:78.21:0,78,1124	0/0:12,0:12:36.11:0,36,509	0/0:24,0:24:63.21:0,63,942	0/0:109,0:75:99:0,168,2396	0/0:122,0:73:99:0,162,2309	0/0:25,0:25:69.22:0,69,1013	0/0:22,0:22:60.18:0,60,858	0/0:34,0:34:96.33:0,96,1438	0/0:26,0:25:72.21:0,72,1055	0/1:62,13:51:99:340,0,1427	0/1:56,10:58:99:233,0,1215	0/1:237,13:228:86.39:86,0,5015	0/0:103,0:73:99:0,147,2015	0/0:18,0:18:36.10:0,36,500	0/0:25,0:25:66.22:0,66,988	0/0:136,0:101:99:0,219,2967	0/0:230,0:174:99:0,506,7485	0/1:50,25:52:99:727,0,771	0/0:58,0:43:93.32:0,93,1393
chr10	83458822	.	C	CT	10159.85	PASS	AB=0.675;AC=11;AF=0.196;AN=56;BaseQRankSum=21.775;DP=1224;FS=3.717;HRun=2;HaplotypeScore=216.0716;InbreedingCoeff=-0.2445;MQ=53.47;MQ0=24;MQRankSum=-22.399;QD=12.78;ReadPosRankSum=3.706;VQSLOD=4.3868;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:38,5:42:26.57:27,0,1045	0/0:12,0:12:33.09:0,33,396	0/0:28,0:25:68.86:0,69,797	0/0:32,0:26:77.79:0,78,864	0/1:34,63:86:99:1261,0,611	0/0:24,0:24:60.13:0,60,702	0/1:32,8:38:44.88:45,0,815	0/0:32,0:31:81.25:0,81,1003	0/0:30,0:30:69.20:0,69,840	0/0:20,0:20:51.16:0,51,631	0/0:13,0:13:30.09:0,30,372	0/0:26,0:25:66.18:0,66,791	0/1:29,62:75:99:1514,0,450	0/1:39,46:66:99:1013,0,666	0/0:27,0:27:66.19:0,66,804	0/0:34,0:34:90.24:0,90,1086	0/0:29,0:29:81.25:0,81,1004	0/0:22,0:22:63.16:0,63,764	0/0:26,2:27:26.01:0,26,751	0/0:28,4:28:40.13:0,40,820	0/1:20,35:49:99:935,0,429	0/1:36,64:77:99:1405,0,461	0/0:18,0:18:54.16:0,54,655	0/0:22,0:22:63.18:0,63,767	0/1:30,53:68:99:1004,0,670	0/1:39,55:80:99:1686,0,652	0/1:43,11:46:99:131,0,1108	0/1:10,43:43:99:1139,0,186
chr10	83459019	.	GTC	G	4347.07	PASS	AB=0.836;AC=8;AF=0.143;AN=56;BaseQRankSum=13.144;DP=1263;FS=1.044;HRun=0;HaplotypeScore=202.3226;InbreedingCoeff=-0.1668;MQ=50.39;MQ0=33;MQRankSum=-4.986;QD=5.67;ReadPosRankSum=2.364;VQSLOD=4.5141;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:99:0,111,1905	0/0:14,0:14:33.11:0,33,567	0/0:22,0:10:24.08:0,24,413	0/0:20,0:13:27.09:0,27,466	0/1:70,12:64:99:209,0,1426	0/0:21,0:20:54.16:0,54,887	0/0:28,0:25:75.24:0,75,1286	0/0:46,0:26:57.18:0,57,945	0/0:22,0:22:57.18:0,57,961	0/0:33,0:33:93.30:0,93,1545	0/0:13,0:13:36.11:0,36,603	0/0:20,0:20:57.20:0,57,988	0/1:94,19:100:99:418,0,3148	0/1:85,20:98:99:367,0,3086	0/0:21,0:21:57.20:0,57,992	0/0:18,0:18:45.15:0,45,789	0/0:34,0:34:99:0,99,1708	0/0:20,0:20:54.18:0,54,936	0/0:14,0:12:36.10:0,36,572	0/0:30,0:28:66.22:0,66,1116	0/1:91,94:178:99:2644,0,3025	0/1:89,10:73:99:100,0,2218	0/0:21,0:21:54.18:0,54,921	0/0:25,0:25:69.21:0,69,1147	0/1:71,16:75:99:276,0,2123	0/1:48,7:45:99:183,0,1694	0/0:33,0:32:90.31:0,90,1550	0/1:32,9:37:99:150,0,1221
chr10	83459744	.	C	CT	10629.16	PASS	AB=0.756;AC=15;AF=0.278;AN=54;BaseQRankSum=-18.381;DP=1596;FS=11.630;HRun=1;HaplotypeScore=183.3266;InbreedingCoeff=-0.1974;MQ=40.72;MQ0=81;MQRankSum=6.175;QD=8.40;ReadPosRankSum=-0.729;VQSLOD=0.8145;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,38:53:73.47:676,0,73	0/0:7,0:7:21.07:0,21,273	./.	0/0:29,0:2:3.01:0,3,39	0/1:84,21:51:99:712,0,447	0/0:18,0:17:39.13:0,39,506	0/1:11,22:31:99:648,0,128	0/1:18,32:41:59.47:1104,0,59	0/0:23,0:23:63.19:0,63,804	0/0:34,0:33:93.30:0,93,1207	0/0:15,0:15:39.11:0,39,492	0/0:24,0:23:63.20:0,63,810	0/1:165,26:136:99:733,0,2148	0/1:117,29:103:99:912,0,965	0/0:25,0:25:75.24:0,75,974	0/0:23,0:23:66.17:0,66,814	0/0:24,0:24:63.17:0,63,785	0/0:15,0:14:39.09:0,39,488	0/1:15,24:23:8.43:818,0,8	1/1:10,17:21:42.14:629,42,0	0/1:65,31:61:56.35:704,0,56	0/1:124,18:79:99:749,0,875	0/0:22,0:22:54.18:0,54,701	0/0:45,0:44:99:0,114,1460	0/1:75,18:41:99:763,0,119	0/1:171,26:125:99:934,0,2257	0/1:16,28:43:99:1105,0,241	0/1:37,7:33:99:141,0,310
chr10	83460037	.	TA	T	5478.43	PASS	AB=0.754;AC=8;AF=0.143;AN=56;BaseQRankSum=16.235;DP=1274;DS;FS=8.531;HRun=3;HaplotypeScore=206.9169;InbreedingCoeff=-0.1668;MQ=53.28;MQ0=37;MQRankSum=-12.671;QD=7.36;ReadPosRankSum=4.971;VQSLOD=1.4639;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:50:99:0,114,1603	0/0:8,0:8:24.08:0,24,345	0/0:18,0:14:42.09:0,42,500	0/0:18,0:16:38.52:0,39,423	0/1:100,27:96:99:435,0,2029	0/0:24,0:24:69.23:0,69,993	0/0:33,0:32:87.24:0,87,1183	0/0:40,0:36:99:0,105,1444	0/0:26,0:26:75.23:0,75,1045	0/0:24,0:24:66.21:0,66,928	0/0:23,0:22:66.22:0,66,950	0/0:22,0:22:66.21:0,66,931	0/1:60,16:59:99:155,0,1455	0/1:74,23:80:99:438,0,1723	0/0:17,0:17:51.16:0,51,715	0/0:34,0:34:93.30:0,93,1320	0/0:25,0:25:75.25:0,75,1075	0/0:26,0:26:75.25:0,75,1080	0/0:23,0:23:69.23:0,69,993	0/0:37,0:36:99:0,99,1402	0/1:49,68:114:99:1998,0,877	0/1:110,23:97:99:546,0,1677	0/0:26,0:26:78.25:0,78,1104	0/0:18,0:18:51.17:0,51,731	0/1:73,13:69:99:224,0,1271	0/1:30,43:56:99:994,0,733	0/0:35,0:34:96.32:0,96,1370	0/1:11,24:31:99:690,0,298
chr10	83460260	.	AGAG	A	4275.94	PASS	AB=0.726;AC=7;AF=0.125;AN=56;BaseQRankSum=15.291;DP=924;FS=34.494;HRun=0;HaplotypeScore=176.3657;InbreedingCoeff=-0.1432;MQ=52.31;MQ0=28;MQRankSum=-15.123;QD=9.88;ReadPosRankSum=1.455;VQSLOD=2.5991;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.13:0,54,1195	0/0:6,0:6:18.06:0,18,412	0/0:20,0:14:39.13:0,39,878	0/0:29,0:24:59.99:0,60,1273	0/1:45,53:92:99:1261,0,1718	0/0:27,0:27:78.27:0,78,1799	0/0:26,0:26:75.23:0,75,1615	0/0:40,0:38:99:0,108,2400	0/0:25,0:25:75.23:0,75,1601	0/0:21,0:21:60.17:0,60,1280	0/0:22,0:22:66.23:0,66,1518	0/0:14,0:14:42.14:0,42,966	0/0:36,0:21:37.20:0,37,1150	0/1:41,7:40:89.98:90,0,1107	0/0:19,0:19:57.18:0,57,1270	0/0:27,0:27:81.28:0,81,1863	0/0:35,0:35:99:0,102,2297	0/0:23,0:23:69.16:0,69,1376	0/0:11,0:11:30.09:0,30,647	0/1:27,9:35:99:114,0,1682	0/0:20,1:21:48.10:0,48,964	0/1:52,50:89:99:1219,0,1518	0/0:21,0:21:63.20:0,63,1392	0/0:21,0:21:57.15:0,57,1215	0/1:33,30:46:99:512,0,989	0/1:24,31:45:99:776,0,876	0/0:27,0:27:81.28:0,81,1823	0/1:22,9:23:99:304,0,707
chr10	83460378	.	T	TAA	6121.88	PASS	AB=0.851;AC=13;AF=0.232;AN=56;BaseQRankSum=-10.911;DP=912;FS=8.864;HRun=9;HaplotypeScore=122.3151;InbreedingCoeff=0.7123;MQ=57.79;MQ0=48;MQRankSum=1.302;QD=19.37;ReadPosRankSum=-1.988;VQSLOD=2.5052;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,17:23:48.16:739,48,0	0/0:13,0:13:33.07:0,33,351	0/0:21,0:14:21.88:0,22,212	0/0:17,0:14:26.44:0,26,226	0/0:70,0:59:90.09:0,90,941	0/0:34,0:33:87.15:0,87,901	1/1:0,19:20:54.18:814,54,0	1/1:21,28:38:42.75:967,43,0	0/0:17,0:17:48.12:0,48,511	0/0:28,0:28:59.54:0,60,617	0/0:26,0:25:69.16:0,69,734	0/0:16,0:16:39.09:0,39,415	0/1:43,0:38:62.27:62,0,475	0/0:51,0:45:41.52:0,42,672	0/0:23,0:23:57.13:0,57,606	0/0:20,0:20:54.07:0,54,553	0/0:19,0:19:48.06:0,48,491	0/0:25,0:25:66.15:0,66,702	0/1:11,23:33:20.44:930,0,20	1/1:24,31:55:99:1459,108,0	0/0:17,0:15:35.84:0,36,381	0/1:48,0:41:7.49:7,0,640	0/0:28,0:28:75.15:0,75,790	0/0:27,0:27:72.15:0,72,756	0/0:66,0:55:49.75:0,50,732	0/0:57,0:39:40.66:0,41,608	1/1:9,28:37:80.70:1144,81,0	0/0:17,0:14:26.23:0,26,243
chr10	83460484	.	AAG	A	625.93	PASS	AB=0.730;AC=3;AF=0.054;AN=56;BaseQRankSum=8.616;DP=772;FS=11.478;HRun=0;HaplotypeScore=103.2800;InbreedingCoeff=-0.0566;MQ=69.91;MQ0=5;MQRankSum=-7.138;QD=5.59;ReadPosRankSum=-0.940;VQSLOD=1.7705;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:32:44.44:0,44,1634	0/0:11,0:11:33.11:0,33,634	0/0:23,0:23:50.12:0,50,1154	0/0:20,0:19:42.82:0,43,833	0/0:24,0:24:72.22:0,72,1331	0/0:35,0:35:99:0,102,1922	0/0:27,0:26:75.26:0,75,1449	0/0:42,0:34:90.30:0,90,1695	0/0:26,0:26:78.27:0,78,1497	0/0:32,0:31:93.32:0,93,1795	0/0:20,0:20:57.20:0,57,1101	0/0:25,0:25:75.26:0,75,1449	0/1:24,17:38:99:272,0,1236	0/1:19,22:37:99:340,0,797	0/0:26,0:26:78.27:0,78,1507	0/0:28,0:28:84.29:0,84,1602	0/0:24,0:24:72.25:0,72,1391	0/0:23,0:23:69.19:0,69,1274	0/0:18,0:18:51.17:0,51,985	0/0:30,0:30:87.28:0,87,1635	0/0:26,0:26:78.24:0,78,1440	0/0:28,1:28:72.25:0,72,1383	0/0:28,0:28:72.25:0,72,1383	0/0:27,0:27:81.28:0,81,1565	0/0:26,0:26:75.26:0,75,1441	0/1:24,6:26:99:114,0,1021	0/0:43,3:43:37.63:0,38,2233	0/0:12,0:12:36.12:0,36,681
chr10	83460569	.	GA	G	6220.07	PASS	AB=0.771;AC=14;AF=0.250;AN=56;BaseQRankSum=20.213;DP=1096;FS=18.442;HRun=2;HaplotypeScore=138.2391;InbreedingCoeff=-0.3263;MQ=52.78;MQ0=35;MQRankSum=-16.907;QD=8.25;ReadPosRankSum=-5.777;VQSLOD=-0.1919;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:42,10:45:99:107,0,1279	0/0:11,0:11:33.11:0,33,525	0/0:30,0:27:80.63:0,81,1226	0/0:25,0:23:69.22:0,69,1081	0/1:50,31:70:99:857,0,1357	0/0:29,0:29:87.30:0,87,1388	0/1:36,6:37:35.06:35,0,1180	0/1:40,5:41:5.39:5,0,1611	0/0:21,0:21:63.21:0,63,1000	0/0:23,0:23:69.23:0,69,1081	0/0:22,0:22:63.20:0,63,979	0/0:22,0:22:66.23:0,66,1053	0/1:33,17:39:99:480,0,827	0/1:26,19:36:99:526,0,759	0/0:34,0:34:99:0,102,1603	0/0:23,0:23:69.22:0,69,1075	0/0:41,0:41:99:0,120,1859	0/0:18,0:18:51.13:0,51,787	0/1:11,9:19:99:281,0,404	0/1:40,8:45:99:117,0,1562	0/1:37,31:64:99:855,0,967	0/1:58,23:70:99:699,0,1528	0/0:24,0:24:66.21:0,66,1024	0/0:19,0:18:54.18:0,54,859	0/1:51,26:66:99:852,0,1451	0/1:35,22:46:99:663,0,821	0/1:51,9:53:99:223,0,1812	0/1:13,15:27:99:520,0,315
chr10	83460975	.	ACTTCT	A	4063.71	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.870;DP=741;FS=2.154;HRun=0;HaplotypeScore=173.3538;InbreedingCoeff=0.9838;MQ=65.76;MQ0=2;MQRankSum=-10.556;QD=30.10;ReadPosRankSum=0.717;VQSLOD=3.7529;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:66.14:0,66,1758	0/0:12,0:12:33.11:0,33,1001	0/0:22,0:18:32.24:0,32,788	0/0:27,0:23:42.40:0,42,954	1/1:14,16:28:41.28:1038,41,0	0/0:21,0:21:63.22:0,63,1925	0/0:29,0:29:63.18:0,63,1596	0/0:41,0:41:99:0,105,2738	0/0:25,0:25:72.25:0,72,2080	0/0:32,0:32:81.27:0,81,2270	0/0:29,0:29:81.26:0,81,2344	0/0:23,0:23:66.20:0,66,1852	1/1:4,12:16:10.15:539,10,0	1/1:5,14:19:32.66:670,33,0	0/0:24,0:24:69.21:0,69,1867	0/0:28,0:28:81.26:0,81,2406	0/0:20,0:20:60.21:0,60,1767	0/0:21,0:21:51.18:0,51,1489	0/0:36,0:36:90.26:0,90,2187	0/0:33,0:30:69.22:0,69,1888	0/0:19,0:19:48.12:0,48,1001	1/1:9,17:25:36.05:674,36,0	0/0:31,0:31:87.30:0,87,2553	0/0:25,0:25:69.22:0,69,1949	1/1:24,20:36:13.69:1142,14,0	0/0:36,0:35:90.30:0,90,2602	0/0:27,0:27:59.97:0,60,1514	0/0:12,0:12:33.11:0,33,992
chr10	83460997	.	CT	C	115.62	PASS	AB=0.571;AC=1;AF=0.018;AN=56;BaseQRankSum=2.786;DP=704;FS=7.436;HRun=7;HaplotypeScore=138.2133;InbreedingCoeff=0.0737;MQ=63.34;MQ0=6;MQRankSum=-1.239;QD=9.64;ReadPosRankSum=-1.836;VQSLOD=0.7267;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:83.41:0,83,1045	0/0:15,0:15:45.13:0,45,552	0/0:35,0:17:15.36:0,15,183	0/0:29,0:17:20.21:0,20,232	0/0:24,0:23:50.75:0,51,587	0/0:26,0:26:78.25:0,78,977	0/0:24,1:25:46.74:0,47,683	0/0:39,0:37:74.02:0,74,889	0/0:20,0:20:54.13:0,54,638	0/0:28,0:28:81.25:0,81,1007	0/0:24,0:24:60.18:0,60,730	0/0:23,0:23:64.76:0,65,796	0/0:14,0:14:39.03:0,39,440	0/0:11,0:11:33.10:0,33,407	0/0:26,0:26:72.10:0,72,844	0/0:30,0:30:87.28:0,87,1095	0/0:25,0:25:72.23:0,72,902	0/0:24,0:24:60.62:0,61,737	0/0:27,0:25:66.21:0,66,830	0/0:32,0:29:63.20:0,63,785	0/1:3,9:12:12.79:190,0,13	0/0:15,0:15:42:0,42,476	0/0:29,0:29:81.25:0,81,1001	0/0:26,0:26:72.22:0,72,890	0/0:33,0:29:71.87:0,72,851	0/0:33,0:33:93.29:0,93,1157	0/0:29,0:29:65.66:0,66,770	0/0:12,0:12:33.11:0,33,415
chr10	83461012	.	C	CT	2915.31	PASS	AB=0.968;AC=16;AF=0.286;AN=56;BaseQRankSum=4.681;DP=681;FS=0.398;HRun=8;HaplotypeScore=126.9058;InbreedingCoeff=0.7572;MQ=60.68;MQ0=4;MQRankSum=0.666;QD=11.43;ReadPosRankSum=-2.601;VQSLOD=1.8099;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,37:44:75.11:823,75,0	0/0:14,1:15:4.39:0,4,291	0/0:29,0:13:11.70:0,12,95	0/0:22,0:11:4.96:0,5,89	0/0:27,1:26:15.03:0,15,195	0/0:26,0:26:66.03:0,66,604	1/1:4,17:22:33.78:449,34,0	1/1:20,17:35:38.97:375,39,0	0/0:21,0:21:57.02:0,57,517	0/1:27,2:29:6.23:6,0,454	0/0:16,0:16:39.02:0,39,356	0/0:21,0:21:50.98:0,51,456	0/0:16,0:16:38.04:0,38,202	0/0:14,0:14:25.90:0,26,129	0/0:25,0:25:32.13:0,32,494	0/0:29,0:29:68.98:0,69,623	0/0:23,0:23:63:0,63,567	0/0:27,0:27:72.04:0,72,658	1/1:11,13:21:38.95:398,39,0	1/1:6,24:28:53.94:578,54,0	1/1:7,2:9:1.22:33,1,0	0/0:16,0:16:16.57:0,17,149	0/0:27,1:28:31.33:0,31,524	0/0:28,0:28:39.10:0,39,482	0/0:30,0:27:56.21:0,56,268	0/1:32,0:32:9.33:9,0,186	1/1:9,17:26:40.89:435,41,0	0/0:12,0:12:27.65:0,28,123
chr10	83461020	.	TC	T	2012.66	PASS	AB=0.949;AC=21;AF=0.375;AN=56;BaseQRankSum=11.095;DP=644;FS=1.598;HRun=3;HaplotypeScore=126.5860;InbreedingCoeff=0.5005;MQ=61.27;MQ0=3;MQRankSum=-0.032;QD=6.21;ReadPosRankSum=-3.523;VQSLOD=-0.6155;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:42:70.70:342,71,0	0/0:15,0:15:45.06:0,45,547	0/1:21,0:10:11.01:11,0,151	0/0:24,0:13:17.55:0,18,217	0/1:23,6:27:99:214,0,101	0/0:24,0:24:72.16:0,72,951	1/1:21,0:21:35.26:191,35,0	1/1:19,0:17:31.10:197,31,0	0/0:20,0:20:60.19:0,60,811	0/0:28,0:28:78.11:0,78,937	0/0:17,0:17:45.07:0,45,575	0/0:20,0:20:57.15:0,57,736	0/1:19,0:19:29.04:29,0,134	0/1:13,0:13:0.05:0,0,81	0/0:30,0:30:90.18:0,90,1082	0/0:26,0:26:78.18:0,78,1004	0/0:23,0:23:66.17:0,66,859	0/0:31,0:31:71.69:0,72,1057	1/1:22,0:19:40.48:244,40,0	1/1:27,1:26:57.21:286,57,0	1/1:8,1:9:14.99:136,15,0	0/1:18,0:18:68.53:69,0,92	0/0:26,0:26:69.06:0,69,852	0/0:26,0:26:65.96:0,66,838	0/1:21,5:24:99:140,0,139	0/1:34,1:35:36.21:36,0,153	1/1:22,0:22:53.94:316,54,0	0/0:10,0:10:25.34:0,25,98
chr10	83463645	.	AG	A	16570.49	PASS	AB=0.540;AC=9;AF=0.161;AN=56;BaseQRankSum=13.218;DP=1345;FS=7.335;HRun=1;HaplotypeScore=125.4912;InbreedingCoeff=0.5732;MQ=54.64;MQ0=108;MQRankSum=2.740;QD=30.52;ReadPosRankSum=-0.641;VQSLOD=3.8321;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,140:141:99:4862,307,0	0/0:4,0:4:9.03:0,9,144	0/0:14,0:5:13.84:0,14,174	0/0:18,0:6:8.31:0,8,94	0/0:44,0:35:66.21:0,66,1029	0/0:15,0:15:42.14:0,42,671	1/1:10,86:91:85.35:2919,85,0	0/1:7,67:62:99:2012,0,110	0/0:45,0:45:99:0,135,2134	0/0:37,0:37:99:0,111,1749	0/0:19,0:18:51.16:0,51,789	0/0:38,0:38:99:0,111,1752	0/0:84,0:53:99:0,141,2221	0/0:61,0:41:99:0,117,1868	0/0:29,0:29:81.25:0,81,1249	0/0:38,0:38:99:0,114,1817	0/0:36,0:36:96.33:0,96,1529	0/0:8,0:8:24.08:0,24,384	0/1:12,57:61:99:1862,0,160	1/1:7,73:78:64.20:2581,64,0	0/0:57,0:53:99:0,153,2396	0/0:58,0:44:81.28:0,81,1283	0/0:15,0:15:39.13:0,39,623	0/0:32,0:32:90.26:0,90,1411	0/0:77,0:55:99:0,129,2045	0/0:68,0:48:99:0,144,2273	0/1:14,67:81:99:2334,0,350	0/0:5,0:5:15.05:0,15,240
chr10	83464156	.	T	TC	2836.46	PASS	AB=0.777;AC=8;AF=0.154;AN=52;BaseQRankSum=5.098;DP=2049;FS=2.354;HRun=3;HaplotypeScore=191.7016;InbreedingCoeff=-0.1891;MQ=31.00;MQ0=474;MQRankSum=-3.126;QD=2.56;ReadPosRankSum=0.009;VQSLOD=-0.1417;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:125,0:107:99:0,181,2206	0/0:15,0:14:36.10:0,36,433	./.	./.	0/1:64,33:60:99:133,0,283	0/0:26,0:21:21.07:0,21,260	0/0:81,0:57:99:0,117,1357	0/0:119,0:97:99:0,252,3030	0/0:25,0:23:51.14:0,51,619	0/0:27,0:22:63.20:0,63,781	0/0:18,0:15:12.04:0,12,149	0/0:24,0:22:42.09:0,42,504	0/1:120,58:103:99:687,0,931	0/1:107,58:109:99:753,0,953	0/0:31,0:26:26.78:0,27,334	0/0:29,0:22:33.08:0,33,393	0/0:25,0:17:24.07:0,24,297	0/0:15,0:9:6.02:0,6,74	0/0:54,0:39:99:0,105,1278	0/0:97,0:73:99:0,138,1622	0/1:149,42:120:99:298,0,881	0/1:92,34:57:85.24:85,0,319	0/0:21,0:18:33.10:0,33,409	0/0:28,0:19:24.06:0,24,283	0/1:86,17:62:27.84:28,0,932	0/1:131,43:115:99:963,0,2328	0/0:117,0:75:60.18:0,60,743	0/1:44,31:37:22.06:22,0,201
chr10	83464914	.	TG	T	6335.79	PASS	AB=0.607;AC=7;AF=0.135;AN=52;BaseQRankSum=-6.604;DP=1103;FS=32.267;HRun=1;HaplotypeScore=143.0782;InbreedingCoeff=-0.1710;MQ=35.50;MQ0=190;MQRankSum=4.448;QD=12.90;ReadPosRankSum=-2.830;VQSLOD=1.5866;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:36,71:93:99:996,0,1075	0/0:6,0:5:12.04:0,12,192	./.	./.	0/0:85,0:43:75.26:0,75,1194	0/0:6,0:4:6.02:0,6,96	0/1:26,45:53:99:689,0,613	0/1:30,54:67:99:1465,0,884	0/0:11,0:10:9.03:0,9,143	0/0:20,0:19:57.19:0,57,909	0/0:11,0:6:12.04:0,12,192	0/0:24,0:22:29.82:0,30,478	0/0:49,0:38:54:0,54,836	0/0:42,0:32:45.15:0,45,714	0/0:20,0:19:33.11:0,33,516	0/0:16,0:16:18.06:0,18,287	0/0:15,0:15:12.04:0,12,192	0/0:14,0:12:24.08:0,24,384	0/1:13,39:46:99:1340,0,295	0/1:11,41:47:99:1023,0,187	0/1:44,22:36:99:440,0,366	0/0:72,0:39:66.22:0,66,1013	0/0:8,0:8:12.51:0,13,192	0/0:23,0:21:48.16:0,48,767	0/0:67,0:38:77.66:0,78,1212	0/0:63,0:41:99:0,108,1704	0/1:10,49:47:59.54:384,0,60	0/0:15,0:6:15.05:0,15,239
chr10	83464988	.	T	TCTCG	1676.76	PASS	AB=0.928;AC=11;AF=0.212;AN=52;BaseQRankSum=6.276;DP=453;FS=11.823;HRun=0;HaplotypeScore=102.7017;InbreedingCoeff=-0.2876;MQ=43.37;MQ0=19;MQRankSum=-10.045;QD=5.63;ReadPosRankSum=2.123;VQSLOD=1.3053;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:24:99:159,0,325	0/0:3,0:2:6.01:0,6,76	0/0:4,0:1:3.01:0,3,42	0/0:16,0:7:20.80:0,21,297	0/0:17,0:15:7.58:0,8,124	0/0:6,0:5:15.05:0,15,227	0/1:23,0:19:98.32:98,0,442	0/0:42,0:35:73.03:0,73,1479	0/0:1,0:1:3.01:0,3,51	0/0:5,0:5:15.05:0,15,245	0/0:4,0:2:3.01:0,3,51	0/0:9,0:8:24.06:0,24,338	0/1:10,16:30:99:116,0,293	0/1:15,18:36:99:104,0,201	0/0:7,0:7:15.04:0,15,214	0/0:3,0:3:6.01:0,6,76	./.	./.	0/1:35,0:32:99:189,0,570	0/1:21,0:17:32.60:33,0,475	0/0:18,0:12:18.06:0,18,279	0/1:14,0:10:10.28:10,0,70	0/0:6,0:4:9.03:0,9,150	0/0:11,0:9:20.88:0,21,328	0/1:42,0:28:99:314,0,245	0/1:30,0:22:6.01:487,0,6	0/1:25,0:21:99:291,0,229	0/1:8,0:7:15.13:15,0,60
chr10	83465004	.	C	CTT	406.05	PASS	AB=0.883;AC=12;AF=0.240;AN=50;BaseQRankSum=5.683;DP=224;FS=3.200;HRun=0;HaplotypeScore=59.0831;InbreedingCoeff=-0.2976;MQ=45.06;MQ0=3;MQRankSum=-5.059;QD=2.86;ReadPosRankSum=1.383;VQSLOD=1.4931;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,2:11:98.39:98,0,134	0/0:3,0:2:6.01:0,6,73	1/1:0,0:1:0.47:1,0,0	0/0:6,0:3:2.16:0,2,62	0/0:8,0:7:6.02:0,6,98	0/0:6,0:5:15.05:0,15,242	0/1:9,2:8:38.35:38,0,248	0/0:21,0:15:45:0,45,623	./.	0/0:2,0:2:6.02:0,6,98	0/0:4,0:2:3:0,3,25	0/0:5,0:4:12.04:0,12,195	0/1:19,0:18:8.04:8,0,239	0/1:18,0:18:24.76:25,0,184	0/0:3,0:2:6.02:0,6,96	0/0:1,0:1:3:0,3,25	./.	./.	0/1:4,0:3:14.95:15,0,43	0/1:8,2:6:24.79:25,0,108	0/0:6,0:3:6.02:0,6,98	0/0:7,0:6:3.96:0,4,29	0/0:4,0:2:6.02:0,6,95	0/0:6,0:6:12.46:0,12,122	0/1:22,0:17:21.59:22,0,391	0/1:12,4:14:99:166,0,251	0/1:14,4:16:99:106,0,303	0/1:4,0:5:31.33:31,0,33
chr10	83465500	.	TCTC	T	78.96	PASS	AB=0.938;AC=7;AF=0.159;AN=44;BaseQRankSum=5.033;DP=290;FS=0.000;HRun=0;HaplotypeScore=48.7910;InbreedingCoeff=0.0260;MQ=25.43;MQ0=22;MQRankSum=-2.591;QD=0.52;ReadPosRankSum=-1.851;VQSLOD=0.7797;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:17:1.44:1,0,219	./.	./.	./.	0/1:27,2:10:2.98:11,0,3	0/0:2,0:1:3.01:0,3,38	0/0:12,0:9:8.36:0,8,113	0/0:11,0:6:17.96:0,18,188	0/0:3,0:3:3.01:0,3,74	0/0:4,0:2:6.02:0,6,77	./.	0/0:2,0:2:3.01:0,3,57	0/0:14,0:2:3.01:0,3,38	0/1:16,3:2:3.14:28,0,3	./.	0/0:3,0:1:3.01:0,3,38	./.	0/0:10,0:8:23.48:0,23,309	0/0:9,0:9:27.09:0,27,486	0/0:7,0:4:0.91:0,1,39	0/0:10,0:10:11.52:0,12,140	0/1:39,2:14:58.54:84,0,59	1/1:6,0:5:1.25:3,1,0	0/0:10,0:7:6.02:0,6,76	0/1:29,2:20:52.94:53,0,169	0/0:19,0:7:15.05:0,15,261	0/0:10,0:5:12.04:0,12,197	0/0:7,0:4:7.89:0,8,26
chr10	83465528	.	TCTC	T	3112.11	PASS	AB=0.971;AC=12;AF=0.214;AN=56;BaseQRankSum=1.599;DP=537;FS=56.130;HRun=0;HaplotypeScore=78.1313;InbreedingCoeff=0.0376;MQ=41.92;MQ0=35;MQRankSum=0.884;QD=9.73;ReadPosRankSum=-0.947;VQSLOD=0.6027;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:26:99:339,0,113	0/0:1,0:1:3.01:0,3,38	0/0:17,0:7:15.47:0,15,132	0/0:31,0:10:15.02:0,15,161	0/1:44,2:26:99:194,0,160	0/0:6,0:2:3.01:0,3,38	0/1:25,0:15:18.01:291,0,18	1/1:20,0:17:50.90:652,51,0	0/0:6,0:4:6.02:0,6,111	0/0:8,0:3:9.03:0,9,114	0/0:4,0:4:3.01:0,3,38	0/0:5,0:5:12.04:0,12,170	0/0:30,0:6:12.04:0,12,150	0/1:39,1:8:22.61:23,0,191	0/0:4,0:3:9.03:0,9,113	0/0:8,0:4:12.04:0,12,151	0/0:7,0:7:18.06:0,18,226	0/0:14,0:12:35.58:0,36,459	0/1:18,0:17:99:312,0,321	0/1:22,0:16:59.81:361,0,60	0/0:25,0:23:52.19:0,52,654	0/1:41,5:24:99:330,0,156	0/0:5,0:4:3.01:0,3,38	0/0:15,0:10:12.04:0,12,152	0/1:38,2:31:99:272,0,368	0/0:24,0:12:30.08:0,30,443	1/1:21,0:14:15.70:494,16,0	0/0:7,0:6:9.03:0,9,113
chr10	83465878	.	TC	T	3116.95	PASS	AB=0.676;AC=4;AF=0.071;AN=56;BaseQRankSum=3.979;DP=1536;FS=0.000;HRun=1;HaplotypeScore=221.8194;InbreedingCoeff=0.2759;MQ=42.23;MQ0=90;MQRankSum=-4.046;QD=12.08;ReadPosRankSum=5.352;VQSLOD=2.5078;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,5:43:78.24:0,78,697	0/0:3,0:3:6.02:0,6,95	0/0:23,0:5:8.90:0,9,68	0/0:16,0:8:17.37:0,17,184	0/0:144,2:109:66.01:0,66,1629	0/0:25,0:23:69.20:0,69,1029	0/0:48,0:28:53.51:0,54,479	0/0:64,0:28:77.93:0,78,749	0/0:22,0:21:62.36:0,62,861	0/0:20,0:20:60.19:0,60,886	0/0:10,0:10:24.08:0,24,375	0/0:25,0:22:58.57:0,59,916	0/0:117,0:74:65.84:0,66,1443	0/0:103,0:68:82.72:0,83,1622	0/0:26,0:25:75.21:0,75,1121	0/0:22,0:19:57.10:0,57,829	0/0:25,0:24:72.12:0,72,1081	0/0:22,0:20:60.17:0,60,900	0/0:59,0:39:99:0,101,986	0/0:50,0:43:74.93:0,75,664	0/1:75,63:105:99:1410,0,567	0/0:133,0:93:95.82:0,96,1507	0/0:28,0:28:57.43:0,57,1020	0/0:23,0:22:66.21:0,66,1023	0/0:97,0:74:93.57:0,94,1536	0/1:52,53:72:99:1465,0,609	0/0:59,0:38:88.87:0,89,743	1/1:1,13:11:2.75:344,3,0
chr10	83466767	.	GT	G	1657.53	PASS	AB=0.836;AC=8;AF=0.143;AN=56;BaseQRankSum=8.753;DP=1427;FS=1.309;HRun=3;HaplotypeScore=147.0552;InbreedingCoeff=-0.1761;MQ=47.59;MQ0=84;MQRankSum=-8.584;QD=2.17;ReadPosRankSum=1.754;VQSLOD=0.0058;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:154,18:167:41.39:41,0,2954	0/0:9,0:9:24.08:0,24,340	0/0:15,0:3:9.01:0,9,103	0/0:15,0:3:3.01:0,3,41	0/0:79,4:42:84.27:0,84,1192	0/0:16,0:16:48.07:0,48,645	0/1:97,16:101:99:120,0,2408	0/1:86,22:96:99:390,0,2564	0/0:25,0:25:69.23:0,69,993	0/0:28,0:28:81.25:0,81,1125	0/0:14,0:14:33.10:0,33,456	0/0:29,0:29:87.27:0,87,1213	0/0:41,2:33:75.24:0,75,1056	0/0:56,2:38:96.31:0,96,1364	0/0:24,0:24:72.24:0,72,1035	0/0:21,0:21:60.19:0,60,847	0/0:38,0:38:99:0,105,1491	0/0:20,0:20:57.15:0,57,797	0/1:52,8:48:74.80:75,0,1546	0/0:51,5:43:72.20:0,72,1002	0/1:91,51:128:99:870,0,2829	0/0:59,7:33:60.18:0,60,843	0/0:17,0:17:51.16:0,51,716	0/0:25,0:25:72.22:0,72,1017	0/0:59,1:40:76.70:0,77,1032	0/1:39,13:36:99:263,0,957	0/1:95,13:97:12.08:12,0,2514	0/1:7,3:5:21.83:22,0,158
chr10	83467117	.	T	TG	5086.87	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=6.286;DP=730;FS=27.962;HRun=2;HaplotypeScore=64.4036;InbreedingCoeff=0.9374;MQ=45.99;MQ0=121;MQRankSum=-13.259;QD=13.18;ReadPosRankSum=-6.143;VQSLOD=0.8583;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:5,62:37:74.64:837,75,0	0/0:8,0:8:24.06:0,24,283	0/0:26,0:6:15.05:0,15,181	0/0:21,0:1:3.01:0,3,37	1/1:2,15:9:17.97:227,18,0	0/0:22,0:22:66.20:0,66,808	1/1:6,37:25:48.09:658,48,0	1/1:8,15:10:18.05:241,18,0	0/0:27,0:26:78.24:0,78,955	0/0:25,0:25:69.22:0,69,855	0/0:18,0:16:48.15:0,48,594	0/0:40,0:40:99:0,117,1423	1/1:3,19:9:27.02:356,27,0	1/1:4,24:17:33.11:473,33,0	0/0:28,0:28:84.26:0,84,1041	0/0:21,0:21:60.19:0,60,744	0/0:33,0:32:96.26:0,96,1173	0/0:24,0:22:69.22:0,69,855	1/1:5,19:9:24.02:269,24,0	1/1:3,26:16:26.88:293,27,0	1/1:11,6:10:11.90:122,12,0	1/1:4,7:4:3.01:38,3,0	0/0:19,0:19:47.99:0,48,594	0/0:32,0:32:90.23:0,90,1096	1/1:2,15:9:18.46:229,18,0	1/1:3,24:10:27.08:371,27,0	1/1:11,45:29:60.05:803,60,0	1/1:1,4:5:12.04:172,12,0
chr10	83467410	.	G	GC	1151.85	PASS	AB=0.628;AC=7;AF=0.125;AN=56;BaseQRankSum=7.531;DP=1587;FS=2.458;HRun=2;HaplotypeScore=136.3784;InbreedingCoeff=-0.1486;MQ=43.45;MQ0=343;MQRankSum=-7.101;QD=2.04;ReadPosRankSum=1.470;VQSLOD=-0.3108;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:150,9:150:99:0,263,4116	0/0:12,0:12:33.06:0,33,392	0/0:27,0:3:9.03:0,9,111	0/0:24,0:4:7.83:0,8,68	0/1:41,51:38:99:178,0,424	0/0:21,0:21:54.17:0,54,667	0/0:85,5:85:99:0,125,1973	0/0:100,8:82:99:0,229,2777	0/0:30,0:30:90.27:0,90,1099	0/0:35,0:35:99:0,102,1264	0/0:19,0:19:45.12:0,45,543	0/0:30,0:30:81.23:0,81,978	0/1:20,14:25:99:238,0,458	0/1:20,22:22:32.02:32,0,541	0/0:24,0:24:72.21:0,72,880	0/0:29,0:29:78.22:0,78,942	0/0:38,0:37:99:0,108,1327	0/0:23,0:23:63.20:0,63,781	0/0:78,3:65:99:0,171,2083	0/0:77,21:78:23.68:0,24,2007	0/1:78,63:92:99:474,0,1858	0/1:15,33:14:33.94:34,0,65	0/0:19,0:19:33.05:0,33,396	0/0:29,0:29:84.22:0,84,1024	0/1:26,59:41:99:309,0,346	0/1:29,45:26:17.13:17,0,712	0/0:73,4:70:99:0,178,2189	0/0:8,17:7:21.07:0,21,260
chr10	83467727	.	CA	C	6297.84	PASS	AB=0.665;AC=6;AF=0.115;AN=52;BaseQRankSum=-8.907;DP=2500;DS;FS=35.459;HRun=2;HaplotypeScore=295.4984;InbreedingCoeff=-0.1464;MQ=34.07;MQ0=507;MQRankSum=3.781;QD=8.19;ReadPosRankSum=1.921;VQSLOD=0.3755;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:77,86:134:99:1159,0,1343	0/0:10,0:10:18.06:0,18,270	./.	./.	0/0:215,0:105:99:0,123,1762	0/0:19,0:19:36.12:0,36,539	0/1:59,59:82:99:648,0,824	0/1:69,61:27:99:426,0,271	0/0:15,0:15:15.05:0,15,222	0/0:43,0:36:99:0,102,1526	0/0:20,0:19:12.04:0,12,180	0/0:26,0:25:39.59:0,40,565	0/0:156,0:122:99:0,243,3362	0/0:175,0:139:99:0,303,3895	0/0:29,0:28:33.10:0,33,491	0/0:32,0:30:62.75:0,63,893	0/0:17,0:15:15.05:0,15,225	0/0:16,0:12:18.06:0,18,270	0/1:59,29:50:99:526,0,1174	0/1:49,88:116:99:2229,0,675	0/0:205,22:175:99:0,132,3735	0/0:123,0:78:99:0,111,1478	0/0:23,1:24:0.18:0,0,499	0/0:32,0:30:48.16:0,48,719	0/0:155,0:87:99:0,156,2227	0/0:234,0:150:99:0,433,6283	0/1:54,79:105:99:1311,0,1012	0/0:112,0:55:72.12:0,72,994
chr10	83468158	.	G	GA	4794.18	PASS	AB=0.719;AC=12;AF=0.214;AN=56;BaseQRankSum=19.535;DP=1101;FS=130.178;HRun=1;HaplotypeScore=193.9885;InbreedingCoeff=-0.0709;MQ=54.12;MQ0=19;MQRankSum=-19.098;QD=7.90;ReadPosRankSum=-1.217;VQSLOD=1.4620;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:120,17:128:6.49:0,6,3947	0/0:12,0:12:36.12:0,36,467	0/0:10,0:10:15.30:0,15,272	0/0:10,0:7:15:0,15,169	0/1:32,38:59:99:715,0,545	0/0:16,0:16:45.15:0,45,584	0/0:55,9:57:69.87:0,70,1893	0/1:61,16:71:99:352,0,1698	0/0:17,0:17:51.13:0,51,631	0/0:21,0:21:60.18:0,60,766	0/0:18,0:18:48.16:0,48,621	0/0:19,0:19:51.17:0,51,662	0/1:22,18:34:99:378,0,685	0/1:22,23:35:99:415,0,521	0/0:18,0:18:48.16:0,48,623	0/0:21,0:21:63.20:0,63,818	0/0:27,0:27:78.25:0,78,1012	0/0:25,0:25:69.03:0,69,893	0/1:48,10:54:99:135,0,1581	0/1:47,20:52:99:189,0,1398	0/0:37,5:40:24.67:0,25,1297	0/1:21,11:29:99:210,0,543	0/0:14,0:14:42.14:0,42,545	0/0:23,0:23:69.22:0,69,883	0/1:17,42:51:99:1127,0,344	0/1:26,21:37:99:518,0,749	0/1:52,25:65:99:269,0,1714	1/1:3,13:17:36.10:486,36,0
chr10	83472427	.	G	GT	854.74	PASS	AB=0.830;AC=6;AF=0.107;AN=56;BaseQRankSum=9.403;DP=1052;FS=32.467;HRun=0;HaplotypeScore=141.7235;InbreedingCoeff=-0.1286;MQ=70.49;MQ0=1;MQRankSum=-6.859;QD=3.98;ReadPosRankSum=2.592;VQSLOD=1.5637;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:112,0:112:99:0,319,4350	0/0:10,0:10:27.09:0,27,378	0/0:22,0:22:48.14:0,48,641	0/0:20,0:20:59.97:0,60,762	0/1:34,10:28:63.21:63,0,805	0/0:24,0:24:72.23:0,72,986	0/0:65,0:65:99:0,190,2613	0/0:70,0:70:99:0,205,2838	0/0:24,0:24:69.22:0,69,949	0/0:19,0:19:54.18:0,54,752	0/0:17,0:17:45.14:0,45,613	0/0:20,0:20:57.19:0,57,795	0/1:30,10:31:99:181,0,718	0/1:30,5:31:99:260,0,592	0/0:24,0:24:72.24:0,72,1002	0/0:33,0:33:93.31:0,93,1292	0/0:35,0:35:99:0,105,1466	0/0:23,0:23:66.18:0,66,900	0/0:63,0:63:99:0,187,2579	0/0:69,0:69:99:0,202,2803	0/1:28,18:44:99:400,0,910	0/0:39,6:24:1.84:0,2,712	0/0:11,0:11:27.09:0,27,373	0/0:19,0:19:57.19:0,57,797	0/0:18,8:16:36.12:0,36,504	0/1:25,5:23:57.30:57,0,611	0/0:84,0:83:99:0,250,3453	0/1:16,1:15:17.25:17,0,422
chr10	83472432	.	C	CT	751.83	PASS	AB=0.847;AC=7;AF=0.125;AN=56;BaseQRankSum=10.940;DP=1115;FS=30.267;HRun=0;HaplotypeScore=147.3576;InbreedingCoeff=-0.1405;MQ=68.07;MQ0=10;MQRankSum=-7.192;QD=2.55;ReadPosRankSum=2.433;VQSLOD=1.4214;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:115,0:114:99:0,304,4021	0/0:10,0:10:30.10:0,30,418	0/0:23,0:23:60.17:0,60,783	0/0:17,0:17:50.47:0,50,625	0/1:52,11:36:62.31:62,0,803	0/0:25,0:25:69.21:0,69,933	0/0:63,0:63:99:0,187,2574	0/0:73,0:73:99:0,205,2770	0/0:22,0:22:66.19:0,66,887	0/0:19,0:19:57.17:0,57,753	0/0:18,0:18:51.11:0,51,677	0/0:21,0:21:60.19:0,60,823	0/1:36,7:32:99:212,0,730	0/1:23,11:30:99:349,0,610	0/0:24,0:24:69.23:0,69,964	0/0:31,0:31:93.31:0,93,1287	0/0:36,0:36:99:0,108,1471	0/0:25,0:25:72.20:0,72,967	0/0:63,0:63:99:0,181,2465	0/0:75,0:75:99:0,217,2871	0/1:47,1:46:91.28:91,0,930	0/1:42,14:28:9.45:9,0,658	0/0:13,0:13:30:0,30,374	0/0:22,0:22:60.19:0,60,819	0/0:38,5:22:47.93:0,48,579	0/1:29,5:24:99:101,0,615	0/0:82,0:81:99:0,241,3343	0/1:13,4:15:56.14:56,0,421
chr10	83472670	.	A	AGGT	1307.36	PASS	AB=0.879;AC=3;AF=0.058;AN=52;BaseQRankSum=8.864;DP=1555;FS=14.859;HRun=0;HaplotypeScore=221.2255;InbreedingCoeff=-0.0627;MQ=48.00;MQ0=128;MQRankSum=-7.968;QD=6.38;ReadPosRankSum=-1.413;VQSLOD=0.8484;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:174,0:170:99:0,421,7054	0/0:11,0:11:30.09:0,30,496	./.	./.	0/1:56,5:49:99:168,0,1544	0/0:25,0:25:57.20:0,57,1005	0/0:98,0:96:99:0,217,3712	0/0:68,0:51:99:0,141,2351	0/0:29,0:29:75.21:0,75,1288	0/0:26,0:26:75.25:0,75,1291	0/0:9,0:9:27.09:0,27,476	0/0:36,0:36:81.05:0,81,1340	0/0:46,6:47:59.75:0,60,1024	0/0:53,10:50:90.28:0,90,1517	0/0:31,0:31:57.16:0,57,973	0/0:28,0:28:72.22:0,72,1206	0/0:51,0:50:99:0,132,2161	0/0:28,0:28:81.22:0,81,1347	0/0:69,0:44:99:0,126,2130	0/0:70,0:69:99:0,175,2992	0/0:195,18:177:99:0,394,6685	0/1:59,2:45:48.83:49,0,1234	0/0:21,0:21:45:0,45,763	0/0:32,0:32:87.28:0,87,1505	0/1:56,26:71:99:1190,0,1349	0/0:41,4:36:11.77:0,12,1566	0/0:88,0:88:99:0,217,3729	0/0:19,0:11:24.08:0,24,418
chr10	83473827	.	CAA	C	2170.07	PASS	AB=0.739;AC=4;AF=0.074;AN=54;BaseQRankSum=12.856;DP=1029;FS=132.290;HRun=2;HaplotypeScore=185.2263;InbreedingCoeff=-0.0817;MQ=56.88;MQ0=18;MQRankSum=-11.122;QD=8.35;ReadPosRankSum=2.834;VQSLOD=0.4201;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:95,7:98:99:0,178,4680	0/0:16,0:16:45.15:0,45,894	0/0:21,0:14:29.16:0,29,578	0/0:24,0:13:30.01:0,30,441	0/0:30,3:30:81.18:0,81,1527	0/0:22,0:22:60.20:0,60,1128	0/0:49,2:45:99:0,117,2122	0/0:51,0:41:99:0,120,2292	0/0:19,0:19:57.18:0,57,1116	0/0:30,0:30:87.30:0,87,1767	0/0:18,0:18:54.19:0,54,1093	0/0:22,0:22:63.14:0,63,1186	0/1:40,26:55:99:559,0,1224	0/1:37,43:56:99:933,0,1026	0/0:40,0:32:87.24:0,87,1681	0/0:24,0:23:63.06:0,63,1272	0/0:38,0:38:99:0,111,2181	0/0:25,0:25:72.21:0,72,1423	0/0:37,4:38:10.73:0,11,1858	0/0:61,0:60:99:0,178,3493	0/0:28,3:30:78.22:0,78,1496	0/0:25,4:26:66.23:0,66,1325	0/0:20,0:20:60.17:0,60,1121	0/0:23,0:23:69.17:0,69,1344	0/0:26,0:26:60.21:0,60,1218	0/1:24,18:28:99:531,0,306	0/1:63,9:69:99:255,0,2765	./.
chr10	83473896	.	C	CCA	84.72	PASS	AB=0.811;AC=3;AF=0.056;AN=54;BaseQRankSum=4.849;DP=878;FS=7.847;HRun=0;HaplotypeScore=125.5997;InbreedingCoeff=-0.0542;MQ=62.22;MQ0=9;MQRankSum=-4.617;QD=0.79;ReadPosRankSum=-0.056;VQSLOD=1.2053;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:80,1:78:99:0,205,2683	0/0:13,0:13:36.12:0,36,487	0/0:28,0:22:60.20:0,60,803	0/0:23,0:20:54.17:0,54,700	0/0:27,3:28:17.41:0,17,824	0/0:16,0:16:39.06:0,39,505	0/0:45,0:44:99:0,123,1662	0/0:72,1:73:99:0,144,2449	0/0:26,0:26:66.21:0,66,876	0/0:24,0:24:63.20:0,63,839	0/0:20,0:20:57.19:0,57,771	0/0:23,0:23:63.21:0,63,852	0/1:28,7:29:6.30:6,0,523	0/1:42,5:36:28.49:28,0,857	0/0:19,2:18:51.17:0,51,690	0/0:20,0:20:54.18:0,54,730	0/0:24,0:24:57.15:0,57,750	0/0:19,0:19:54.18:0,54,729	0/0:44,0:38:96.25:0,96,1227	0/0:49,0:49:99:0,132,1743	0/0:39,3:41:99:0,108,1392	0/0:18,1:18:42.14:0,42,568	0/0:18,0:18:51.17:0,51,690	0/0:30,0:30:87.27:0,87,1158	0/0:24,4:28:63.21:0,63,851	0/1:14,10:21:28.55:143,0,29	0/0:54,1:53:99:0,132,1768	./.
chr10	83474678	.	CA	C	1425.58	PASS	AB=1.000;AC=8;AF=0.148;AN=54;BaseQRankSum=3.470;DP=1568;FS=3.276;HRun=2;HaplotypeScore=297.2034;InbreedingCoeff=0.3692;MQ=45.37;MQ0=64;MQRankSum=2.167;QD=4.04;ReadPosRankSum=1.664;VQSLOD=0.2873;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:86,0:74:99:308,0,296	0/0:16,0:16:45.10:0,45,622	./.	0/0:20,0:7:15.04:0,15,185	0/0:103,0:68:50.02:0,50,982	0/0:33,0:32:84.17:0,84,1184	0/1:44,0:35:62.68:206,0,63	1/1:43,1:24:11.92:210,12,0	0/0:33,0:33:96.32:0,96,1420	0/0:21,0:20:60.19:0,60,865	0/0:12,0:12:30.08:0,30,401	0/0:28,0:28:66.16:0,66,944	0/0:117,0:102:3.06:0,3,2253	0/0:126,0:107:72.56:0,73,2315	0/0:40,0:40:99:0,108,1552	0/0:24,0:24:51.17:0,51,764	0/0:32,0:32:93.30:0,93,1359	0/0:24,0:24:69.22:0,69,1011	0/1:33,0:24:38.48:152,0,38	0/1:80,0:61:99:302,0,234	0/0:200,8:193:99:0,114,3995	0/0:89,0:55:48.44:0,48,864	0/0:17,0:17:39.03:0,39,531	0/0:21,0:21:57.11:0,57,768	0/0:77,0:66:51.40:0,51,1602	0/0:110,0:77:99:0,172,2442	1/1:66,0:55:21.84:391,22,0	0/0:37,0:29:51.16:0,51,729
chr10	83474680	.	AG	A	6576.68	PASS	AB=0.773;AC=15;AF=0.278;AN=54;BaseQRankSum=-0.530;DP=1554;FS=13.946;HRun=3;HaplotypeScore=271.2150;InbreedingCoeff=0.3518;MQ=45.47;MQ0=59;MQRankSum=-1.623;QD=7.68;ReadPosRankSum=-2.195;VQSLOD=-0.3176;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,63:73:99:943,0,103	0/0:17,0:17:48.13:0,48,648	./.	0/0:20,0:7:15.05:0,15,209	0/1:89,14:69:99:140,0,715	0/0:33,0:32:81.27:0,81,1151	1/1:5,38:34:34.10:645,34,0	1/1:6,38:24:44.20:704,44,0	0/0:34,0:34:99:0,99,1398	0/0:21,0:20:57.19:0,57,806	0/0:12,0:12:27.02:0,27,357	0/0:28,0:28:72.09:0,72,973	0/1:95,22:102:99:331,0,1589	0/1:104,15:100:99:245,0,1563	0/0:39,0:39:99:0,99,1362	0/0:25,0:25:54.17:0,54,761	0/0:32,0:32:90.19:0,90,1229	0/0:23,0:23:66.22:0,66,941	1/1:2,31:24:43.98:709,44,0	0/1:15,67:63:28.17:1155,0,28	0/0:211,0:197:99:0,197,3487	0/1:75,16:57:99:132,0,579	0/0:16,0:16:42.04:0,42,540	0/0:20,0:20:54.17:0,54,754	0/1:60,16:66:99:274,0,1116	0/0:103,0:70:99:0,164,1708	1/1:7,56:52:88.17:1297,88,0	0/0:37,0:29:51.09:0,51,662
chr10	83474876	.	A	AG	5871.93	PASS	AB=0.767;AC=11;AF=0.212;AN=52;BaseQRankSum=16.826;DP=1533;DS;FS=2.209;HRun=2;HaplotypeScore=242.0644;InbreedingCoeff=-0.2691;MQ=38.67;MQ0=157;MQRankSum=-8.066;QD=5.80;ReadPosRankSum=0.530;VQSLOD=1.6910;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:119,6:113:20.82:21,0,1111	0/0:10,0:10:21.07:0,21,257	./.	./.	0/1:56,34:61:99:377,0,572	0/0:28,0:26:42.13:0,42,520	0/0:46,1:40:51.16:0,51,629	0/0:47,2:33:47.15:0,47,1033	0/0:31,0:31:51.47:0,51,631	0/0:26,0:24:66.21:0,66,818	0/0:24,0:21:33.04:0,33,409	0/0:43,0:43:56.86:0,57,706	0/1:76,49:99:99:818,0,947	0/1:69,63:100:99:960,0,969	0/0:34,0:34:51.16:0,51,632	0/0:28,0:27:38.65:0,39,482	0/0:27,0:21:15.05:0,15,186	0/0:26,0:21:32.89:0,33,408	0/1:29,2:22:23.12:23,0,609	0/0:45,1:41:87.23:0,87,1049	0/1:111,53:131:99:1106,0,1513	0/1:57,31:68:99:612,0,317	0/0:22,0:20:42.13:0,42,514	0/0:45,0:40:36.11:0,36,446	0/1:51,24:58:99:403,0,504	0/1:58,51:76:99:1036,0,1314	0/1:47,8:45:99:122,0,859	0/1:7,12:18:72.46:392,0,72
chr10	83475103	.	GT	G	2744.54	PASS	AB=0.772;AC=5;AF=0.089;AN=56;BaseQRankSum=16.712;DP=1425;FS=98.225;HRun=2;HaplotypeScore=240.3130;InbreedingCoeff=-0.0981;MQ=50.41;MQ0=52;MQRankSum=-15.504;QD=5.72;ReadPosRankSum=0.121;VQSLOD=-0.0345;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,168,2446	0/0:9,0:9:27.09:0,27,405	0/0:21,0:11:33.06:0,33,441	0/0:25,0:15:42.14:0,42,623	0/1:93,48:121:99:972,0,2664	0/0:15,0:15:42.14:0,42,629	0/0:65,0:65:99:0,187,2740	0/0:63,0:56:99:0,163,2405	0/0:31,0:31:69.21:0,69,994	0/0:26,0:26:72.24:0,72,1079	0/0:21,0:21:45.11:0,45,649	0/0:38,0:38:93.27:0,93,1367	0/0:76,2:74:99:0,109,2551	0/0:85,0:81:99:0,202,2917	0/0:30,0:30:72.24:0,72,1078	0/0:32,0:32:90.30:0,90,1348	0/0:24,0:24:66.22:0,66,989	0/0:23,0:23:63.21:0,63,944	0/0:40,0:37:99:0,99,1435	0/0:62,2:56:99:0,150,2225	0/0:91,0:88:99:0,241,3427	0/1:98,57:133:99:1112,0,2732	0/0:28,0:28:81.23:0,81,1171	0/0:25,0:25:75.24:0,75,1103	0/1:68,29:82:99:420,0,2037	0/1:58,17:72:99:304,0,2154	0/0:49,0:48:99:0,123,1817	0/1:9,3:11:53.70:54,0,225
chr10	83475814	.	GA	G	8456.20	PASS	AB=0.569;AC=27;AF=0.482;AN=56;BaseQRankSum=9.627;DP=811;FS=3.078;HRun=10;HaplotypeScore=87.4754;InbreedingCoeff=0.9499;MQ=51.46;MQ0=29;MQRankSum=-0.523;QD=15.52;ReadPosRankSum=2.526;VQSLOD=5.4097;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,67:68:99:1562,180,0	0/0:9,0:9:21.06:0,21,232	0/0:22,0:5:14.93:0,15,131	0/0:13,0:8:20.99:0,21,209	1/1:21,33:38:44.84:592,45,0	0/0:21,0:21:57.15:0,57,630	1/1:6,28:33:77.98:677,78,0	1/1:3,17:11:26.96:228,27,0	0/0:18,0:19:53.96:0,54,563	0/0:19,0:19:48.08:0,48,517	0/0:16,1:17:36.10:0,36,398	0/0:18,0:18:51.09:0,51,540	0/1:7,21:17:2.47:251,0,2	1/1:6,29:22:50.99:443,51,0	0/0:14,0:14:36.01:0,36,382	0/0:21,1:20:22.05:0,22,460	0/0:29,0:29:75.08:0,75,783	0/0:13,0:13:36.07:0,36,386	1/1:5,20:24:62.93:538,63,0	1/1:6,42:47:99:937,103,0	1/1:15,23:34:39.66:514,40,0	1/1:13,33:40:28.11:664,28,0	0/0:20,0:20:48.12:0,48,524	0/0:30,0:30:90.14:0,90,957	1/1:13,31:35:28.73:579,29,0	1/1:14,23:33:40.28:567,40,0	1/1:7,32:38:53.80:696,54,0	1/1:7,8:16:23.97:208,24,0
chr10	83475891	.	CACACAG	C	1451.83	PASS	AB=0.992;AC=20;AF=0.400;AN=50;BaseQRankSum=-0.172;DP=769;FS=45.826;HRun=0;HaplotypeScore=181.1276;InbreedingCoeff=0.2020;MQ=45.19;MQ0=61;MQRankSum=3.069;QD=3.46;ReadPosRankSum=3.040;VQSLOD=1.4353;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:53:20.85:0,21,158	1/1:10,0:10:17.97:158,18,0	./.	./.	0/1:47,0:35:48.90:49,0,78	0/1:14,0:14:1.98:2,0,235	0/0:35,0:26:14.84:0,15,134	0/0:39,0:26:17.85:0,18,131	0/0:14,0:14:30.01:0,30,493	1/1:18,0:17:29.92:349,30,0	1/1:15,4:18:23.92:190,24,0	0/0:15,0:15:30.03:0,30,485	0/1:38,0:33:24.06:24,0,452	0/1:29,0:27:62.98:67,0,63	./.	1/1:12,0:11:23.36:250,23,0	1/1:18,0:17:29.87:300,30,0	0/0:17,0:16:32.99:0,33,506	0/1:27,0:19:95.03:95,0,141	0/1:32,0:29:11.72:12,0,66	0/1:56,0:32:30.93:78,0,31	0/1:34,0:24:16:39,0,16	0/0:10,0:9:9.02:0,9,202	0/0:43,0:43:83.82:0,84,1156	0/1:45,0:29:5.99:6,0,214	0/0:42,0:36:13.94:0,14,793	0/1:18,0:17:8.52:9,0,144	0/0:15,0:5:12.01:0,12,228
chr10	83475919	.	CAG	C	1054.17	PASS	AB=0.995;AC=16;AF=0.308;AN=52;BaseQRankSum=0.279;DP=796;FS=21.754;HRun=0;HaplotypeScore=151.2035;InbreedingCoeff=0.1959;MQ=36.77;MQ0=85;MQRankSum=5.597;QD=2.57;ReadPosRankSum=1.021;VQSLOD=1.1167;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:39:20.84:0,21,158	1/1:11,0:9:17.80:133,18,0	./.	./.	0/1:60,2:44:48.98:49,0,78	0/1:21,0:17:0.18:0,0,150	0/0:35,0:26:17.69:0,18,113	0/0:32,0:20:37.56:0,38,225	0/0:15,0:14:32.80:0,33,326	0/1:22,0:18:45.98:229,0,46	1/1:19,0:17:23.92:190,24,0	0/0:17,0:17:25.83:0,26,264	0/1:39,0:33:20.72:21,0,267	0/1:30,0:26:30.11:75,0,30	0/1:22,0:19:0:0,0,0	1/1:16,0:11:23.35:189,23,0	0/1:22,0:19:14.57:208,0,15	0/0:22,1:17:38.13:0,38,355	0/0:25,0:24:54.83:0,55,354	0/0:35,0:30:14.56:0,15,96	0/1:66,1:31:12.79:78,0,13	0/1:35,0:20:16:39,0,16	0/0:8,1:8:9.02:0,9,110	0/0:46,0:41:72.86:0,73,758	0/1:44,0:27:5.99:6,0,137	0/0:44,0:34:16.95:0,17,670	0/0:18,0:16:29.18:0,29,187	0/0:18,0:7:14.41:0,14,168
chr10	83475921	.	GACACACACACAC	G	186.91	PASS	AB=0.964;AC=13;AF=0.260;AN=50;BaseQRankSum=2.026;DP=799;FS=1.023;HRun=0;HaplotypeScore=219.8250;InbreedingCoeff=0.1315;MQ=36.29;MQ0=88;MQRankSum=-1.917;QD=0.56;ReadPosRankSum=-2.510;VQSLOD=2.3218;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:47,0:38:0.88:2,1,0	1/1:10,0:8:2.03:6,2,0	./.	./.	1/1:61,0:44:0.14:0,0,0	0/0:22,0:18:10.39:0,10,333	0/1:35,0:26:35.23:35,0,134	0/1:33,0:20:3.38:3,0,87	0/0:15,0:14:18.03:0,18,600	0/0:22,0:18:29.59:0,30,407	./.	0/0:18,0:18:19.31:0,19,667	0/0:38,0:32:29.11:0,29,659	0/0:30,0:26:4.52:0,5,56	0/1:23,0:19:0.04:0,0,0	0/1:16,0:11:17.45:17,0,25	0/0:22,0:19:15.91:0,16,276	0/0:23,0:17:12.04:0,12,541	0/1:16,0:24:95.27:95,0,281	0/0:23,12:30:5.80:0,6,64	0/0:68,0:30:5.96:0,6,162	0/1:37,0:21:0.02:0,0,0	0/0:9,0:8:9.01:0,9,299	0/0:44,0:39:27.09:0,27,1195	0/0:44,0:27:6.02:0,6,232	0/1:45,0:34:99:137,0,1017	0/0:19,0:17:5.42:0,5,19	0/0:19,0:7:15.02:0,15,355
chr10	83476320	.	A	AC	394.46	PASS	AB=0.850;AC=4;AF=0.074;AN=54;BaseQRankSum=11.399;DP=717;FS=30.375;HRun=0;HaplotypeScore=80.3120;InbreedingCoeff=-0.0918;MQ=51.32;MQ0=17;MQRankSum=-10.039;QD=2.99;ReadPosRankSum=-3.385;VQSLOD=0.6708;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:73,0:68:99:0,119,2153	0/0:12,0:11:33.11:0,33,461	./.	0/0:1,0:1:3.01:0,3,42	0/0:54,0:53:96.69:0,97,1626	0/0:17,0:17:48.16:0,48,671	0/0:22,2:20:13.51:0,14,665	0/0:66,3:60:99:0,180,2383	0/0:7,0:7:21.07:0,21,293	0/0:19,0:19:54.18:0,54,755	0/0:23,0:22:57.19:0,57,796	0/0:9,0:9:21:0,21,270	0/1:31,1:32:7.64:8,0,830	0/0:26,0:25:42.70:0,43,799	0/0:11,0:11:27.09:0,27,377	0/0:9,0:9:24.08:0,24,336	0/0:23,0:23:60.20:0,60,836	0/0:18,0:18:51.17:0,51,712	0/1:27,6:30:55.92:56,0,972	0/0:35,1:36:31.47:0,31,1126	0/1:20,5:21:99:113,0,329	0/0:11,0:10:12.78:0,13,282	0/0:7,0:5:15.04:0,15,195	0/0:3,0:3:6.02:0,6,84	0/0:67,0:65:99:0,120,2102	0/1:28,13:36:99:322,0,653	0/0:43,0:43:97.07:0,97,1589	0/0:9,1:9:21.06:0,21,276
chr10	83476447	.	CAG	C	300.86	PASS	AB=0.823;AC=3;AF=0.054;AN=56;BaseQRankSum=8.540;DP=1088;FS=7.529;HRun=0;HaplotypeScore=161.0677;InbreedingCoeff=-0.0595;MQ=61.92;MQ0=38;MQRankSum=-8.661;QD=1.74;ReadPosRankSum=-1.173;VQSLOD=1.9766;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:94,3:92:99:0,183,4828	0/0:9,0:9:24.08:0,24,429	0/0:26,0:22:63.22:0,63,1129	0/0:26,0:23:60.20:0,60,1046	0/0:56,4:49:36.31:0,36,1739	0/0:27,0:27:75.24:0,75,1366	0/0:51,2:48:99:0,106,2267	0/0:59,2:55:99:0,160,2972	0/0:18,0:18:51.17:0,51,955	0/0:24,0:24:72.25:0,72,1349	0/0:19,0:19:54.19:0,54,1005	0/0:13,0:13:36.12:0,36,664	0/0:49,8:47:64.79:0,65,1887	0/0:56,6:51:7.95:0,8,2175	0/0:23,0:23:57.20:0,57,1050	0/0:13,0:13:39.13:0,39,731	0/0:25,0:25:72.25:0,72,1331	0/0:23,0:23:60.21:0,60,1108	0/0:36,0:34:90.28:0,90,1637	0/0:48,0:45:99:0,105,2261	0/1:93,12:85:99:108,0,2593	0/0:32,2:25:48.11:0,48,796	0/0:17,0:17:48.16:0,48,899	0/0:25,0:25:72.25:0,72,1349	0/0:59,4:53:99:0,135,2504	0/1:46,11:42:99:182,0,1071	0/0:53,3:50:99:0,129,2392	0/1:7,4:10:99:111,0,204
chr10	83476625	.	GT	G	217.84	PASS	AB=0.784;AC=5;AF=0.089;AN=56;BaseQRankSum=8.381;DP=1132;FS=1.428;HRun=3;HaplotypeScore=210.9307;InbreedingCoeff=-0.0884;MQ=64.75;MQ0=1;MQRankSum=-8.867;QD=0.83;ReadPosRankSum=-0.635;VQSLOD=-0.7463;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:94,2:96:99:0,272,2168	0/0:14,0:14:42.11:0,42,582	0/0:28,0:26:78.22:0,78,1048	0/0:26,0:24:43.80:0,44,773	0/0:44,11:46:99:0,123,994	0/0:28,0:28:84.26:0,84,1173	0/0:40,3:40:99:0,111,859	0/0:61,1:60:99:0,170,1199	0/0:26,0:26:72.24:0,72,1034	0/0:28,0:28:78.25:0,78,1104	0/0:21,0:21:60.20:0,60,863	0/0:21,0:21:57.18:0,57,795	0/0:49,10:54:33.11:0,33,924	0/1:49,14:59:53.86:54,0,958	0/0:32,0:32:96.29:0,96,1329	0/0:16,0:16:48.13:0,48,654	0/0:33,0:32:96.24:0,96,1304	0/0:31,0:31:93.31:0,93,1338	0/0:52,1:53:99:0,146,1055	0/0:33,1:33:92.71:0,93,733	0/0:65,3:68:99:0,133,1274	0/1:38,10:44:28.04:28,0,718	0/0:19,0:19:57.18:0,57,800	0/0:24,0:24:69.18:0,69,953	0/0:47,5:47:99:0,120,954	0/1:29,35:49:99:220,0,443	0/1:64,8:70:24.39:24,0,1210	0/1:10,6:13:0.92:1,0,206
chr10	83478025	.	A	AG	4975.37	PASS	AB=0.740;AC=10;AF=0.179;AN=56;BaseQRankSum=19.245;DP=1198;FS=73.611;HRun=0;HaplotypeScore=184.6749;InbreedingCoeff=-0.2157;MQ=63.91;MQ0=7;MQRankSum=-17.791;QD=7.41;ReadPosRankSum=-1.976;VQSLOD=1.9702;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:72,0:72:99:0,208,2798	0/0:7,0:7:21.07:0,21,293	0/0:23,0:23:64.73:0,65,820	0/0:26,0:27:64.28:0,64,721	0/1:59,39:72:99:400,0,1016	0/0:28,0:27:81.27:0,81,1132	0/0:69,1:70:99:0,208,2792	0/0:56,0:56:99:0,162,2176	0/0:18,0:18:54.18:0,54,752	0/0:21,0:21:60.20:0,60,833	0/0:16,0:16:48.16:0,48,670	0/0:12,0:12:36.11:0,36,483	0/1:36,22:54:99:561,0,972	0/1:39,24:60:99:504,0,1080	0/0:19,0:19:57.19:0,57,796	0/0:21,0:21:60.17:0,60,805	0/0:39,0:39:99:0,117,1610	0/0:25,0:25:69.15:0,69,904	0/1:29,4:33:78.22:78,0,1033	0/0:27,3:26:72.18:0,72,963	0/1:74,29:99:99:827,0,2611	0/1:64,29:68:99:480,0,1376	0/0:18,0:18:51.17:0,51,704	0/0:22,0:22:63.21:0,63,880	0/1:33,59:69:99:758,0,963	0/1:29,40:55:99:1118,0,635	0/1:38,3:41:11.22:11,0,1277	0/1:6,10:14:99:238,0,215
chr10	83478233	.	G	GT	14930.92	PASS	AB=0.735;AC=10;AF=0.179;AN=56;BaseQRankSum=30.000;DP=1902;FS=4.733;HRun=4;HaplotypeScore=286.4430;InbreedingCoeff=-0.2109;MQ=54.64;MQ0=41;MQRankSum=-25.039;QD=12.35;ReadPosRankSum=-2.541;VQSLOD=1.6216;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:100,3:101:99:0,177,2750	0/1:11,1:12:4.83:5,0,338	0/0:31,0:31:87.24:0,87,979	0/0:20,0:20:54.15:0,54,608	0/1:78,74:126:99:1694,0,1547	0/0:28,0:27:72.19:0,72,806	0/0:55,3:56:99:0,109,1613	0/0:81,4:83:99:0,106,2344	0/0:17,0:17:48.14:0,48,544	0/0:27,0:27:78.21:0,78,876	0/0:14,0:14:36.09:0,36,398	0/0:28,0:28:81.22:0,81,908	0/1:85,103:147:99:2958,0,1229	0/1:102,103:170:99:2838,0,1707	0/0:33,0:33:96.24:0,96,1070	0/0:35,0:35:96.27:0,96,1089	0/0:33,0:33:87.25:0,87,986	0/0:19,0:19:57.16:0,57,647	0/0:53,2:54:65.33:0,65,1497	0/0:48,0:48:99:0,132,1497	0/1:113,71:165:99:2414,0,1788	0/1:71,59:116:99:1617,0,1290	0/0:26,0:26:78.22:0,78,877	0/0:33,0:33:99:0,99,1112	0/1:65,56:99:99:1127,0,1321	0/1:87,45:98:99:1992,0,430	0/1:47,10:53:99:121,0,1364	0/1:19,9:28:99:164,0,571
chr10	83478634	.	CT	C	914.95	PASS	AB=0.821;AC=2;AF=0.036;AN=56;BaseQRankSum=9.827;DP=1511;FS=5.278;HRun=3;HaplotypeScore=238.6424;InbreedingCoeff=-0.0370;MQ=54.56;MQ0=49;MQRankSum=-1.852;QD=12.71;ReadPosRankSum=-1.051;VQSLOD=1.8843;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:63:99:0,175,2504	0/0:22,0:22:66.18:0,66,897	0/0:33,0:30:68.91:0,69,935	0/0:25,0:23:41.19:0,41,673	0/0:184,0:124:99:0,144,3452	0/0:33,0:33:96.30:0,96,1346	0/0:44,0:42:99:0,126,1780	0/0:74,0:74:99:0,202,2873	0/0:22,0:22:66.21:0,66,927	0/0:23,0:23:69.23:0,69,994	0/0:32,0:32:93.31:0,93,1339	0/0:29,0:29:87.28:0,87,1236	0/0:116,0:95:99:0,192,3156	0/0:87,0:76:99:0,137,2470	0/0:26,0:26:78.26:0,78,1122	0/0:23,0:22:66.22:0,66,950	0/0:24,0:24:63.18:0,63,884	0/0:21,0:21:60.20:0,60,864	0/0:42,0:42:99:0,126,1739	0/0:58,0:58:99:0,168,2284	0/1:24,30:51:99:965,0,713	0/0:153,0:107:99:0,230,3536	0/0:21,0:21:60.19:0,60,846	0/0:11,0:11:33.11:0,33,475	0/0:112,0:82:99:0,161,2505	0/0:94,0:61:47.57:0,48,1736	0/0:66,0:59:99:0,178,2529	0/1:18,0:10:38.78:39,0,189
chr10	83478637	.	TA	T	365.22	PASS	AB=0.812;AC=3;AF=0.054;AN=56;BaseQRankSum=10.397;DP=1524;FS=3.620;HRun=3;HaplotypeScore=240.6326;InbreedingCoeff=-0.0583;MQ=53.29;MQ0=50;MQRankSum=-3.170;QD=2.21;ReadPosRankSum=-0.696;VQSLOD=-0.6134;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:64:99:0,187,2570	0/0:23,0:23:63.20:0,63,885	0/0:32,0:28:72.21:0,72,951	0/0:21,0:19:56.20:0,56,732	0/0:163,26:128:10.46:0,10,3530	0/0:32,0:32:93.27:0,93,1315	0/0:46,0:44:99:0,126,1773	0/0:75,0:75:99:0,217,3008	0/0:22,0:22:66.18:0,66,926	0/0:24,0:24:72.24:0,72,1023	0/0:32,0:32:93.29:0,93,1339	0/0:30,0:30:87.28:0,87,1230	0/0:109,7:96:99:0,128,3062	0/0:77,9:76:41.18:0,41,2300	0/0:26,0:26:78.25:0,78,1100	0/0:25,0:24:72.21:0,72,985	0/0:22,0:22:63.20:0,63,886	0/0:20,0:20:60.20:0,60,863	0/0:44,0:44:99:0,120,1657	0/0:54,0:54:99:0,156,2209	0/1:52,3:52:99:232,0,738	0/0:152,10:114:99:0,169,3564	0/0:20,0:20:57.19:0,57,808	0/0:11,0:11:33.11:0,33,475	0/0:99,14:83:99:0,112,2313	0/1:71,22:58:99:112,0,1643	0/0:68,0:65:99:0,196,2688	0/1:9,8:9:99:121,0,188
chr10	83478680	.	GC	G	344.30	PASS	AB=0.838;AC=3;AF=0.054;AN=56;BaseQRankSum=9.926;DP=1766;DS;FS=98.490;HRun=2;HaplotypeScore=318.7119;InbreedingCoeff=-0.0564;MQ=49.57;MQ0=60;MQRankSum=-9.079;QD=1.09;ReadPosRankSum=0.213;VQSLOD=0.2201;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,162,2319	0/0:17,0:17:51.17:0,51,764	0/0:27,0:18:45.15:0,45,658	0/0:27,0:13:36.11:0,36,492	0/0:237,13:189:99:0,225,5669	0/0:26,0:26:78.18:0,78,1140	0/0:53,0:50:99:0,144,1999	0/0:86,0:80:99:0,232,3308	0/0:25,0:25:75.25:0,75,1121	0/0:25,0:25:75.25:0,75,1105	0/0:30,0:30:84.28:0,84,1257	0/0:24,0:24:72.23:0,72,1059	0/0:101,0:89:99:0,220,3223	0/0:94,0:81:99:0,187,2685	0/0:35,0:35:99:0,105,1571	0/0:32,0:32:93.31:0,93,1373	0/0:22,0:22:66.22:0,66,989	0/0:21,0:21:63.21:0,63,943	0/0:45,0:40:99:0,117,1610	0/0:58,0:54:99:0,163,2377	0/0:67,0:63:99:0,144,2096	0/0:210,7:169:99:0,251,5514	0/0:14,0:14:39.13:0,39,584	0/0:16,0:16:45.14:0,45,654	0/1:161,11:141:19.90:20,0,3920	0/1:89,21:68:99:153,0,1994	0/0:79,0:72:99:0,217,3191	0/1:21,12:26:99:271,0,637
chr10	83478981	.	A	AAT	9724	PASS	AB=0.916;AC=14;AF=0.250;AN=56;BaseQRankSum=17.576;DP=1982;DS;FS=4.483;HRun=0;HaplotypeScore=492.5640;InbreedingCoeff=-0.1380;MQ=52.78;MQ0=37;MQRankSum=-13.756;QD=6.07;ReadPosRankSum=9.654;VQSLOD=2.0276;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:40,3:43:58.34:58,0,369	0/0:14,0:14:42.11:0,42,582	0/0:41,0:28:48.04:0,48,503	0/0:27,0:12:20.66:0,21,156	0/1:218,25:223:99:1618,0,1744	0/0:22,0:22:63.18:0,63,885	0/1:31,3:32:61.73:62,0,201	0/1:71,9:79:99:293,0,840	0/0:28,0:28:84.17:0,84,1101	0/0:26,0:26:66.14:0,66,914	0/0:26,0:26:75.18:0,75,995	0/0:26,0:26:78.21:0,78,1068	0/1:114,11:121:99:827,0,1169	0/1:128,11:136:99:983,0,1086	0/0:20,0:20:51.13:0,51,667	0/0:21,0:21:60.17:0,60,842	0/0:22,0:22:63.16:0,63,902	0/0:13,0:13:35.73:0,36,415	0/1:39,5:40:41.40:41,0,569	0/0:55,3:57:36.83:0,37,867	0/1:100,14:107:99:1090,0,422	0/1:162,10:156:99:823,0,1426	0/0:22,0:22:65.89:0,66,837	0/0:15,0:15:45.13:0,45,628	0/1:199,18:197:99:1490,0,1576	1/1:195,3:191:99:1711,104,0	0/1:60,1:60:8.33:8,0,738	0/1:96,1:94:56.81:720,0,57
chr10	83478982	.	A	AT	17503.05	PASS	AB=0.856;AC=14;AF=0.250;AN=56;BaseQRankSum=12.684;DP=1989;DS;FS=7.775;HRun=0;HaplotypeScore=426.3930;InbreedingCoeff=-0.0752;MQ=52.83;MQ0=31;MQRankSum=-9.361;QD=10.79;ReadPosRankSum=10.098;VQSLOD=3.6785;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:44:58.54:59,0,142	0/0:14,0:14:42.12:0,42,540	0/0:41,0:28:51.26:0,51,470	0/0:27,0:12:17.68:0,18,153	0/1:195,55:224:99:1809,0,1997	0/0:21,0:21:63.16:0,63,812	0/1:32,1:31:43.40:43,0,62	0/1:80,0:79:99:107,0,495	0/0:28,0:28:84.11:0,84,1004	0/0:27,0:27:72.15:0,72,904	0/0:26,0:26:75.12:0,75,906	0/0:26,0:26:78.20:0,78,978	0/1:105,27:124:99:978,0,1159	0/1:95,44:136:99:1558,0,1124	0/0:20,0:20:51.11:0,51,616	0/0:22,0:22:60.16:0,60,773	0/0:21,0:21:63.16:0,63,829	0/0:13,0:13:38.65:0,39,394	0/0:44,0:40:21.52:0,22,414	0/1:59,0:58:16.70:17,0,487	0/1:68,47:108:99:1864,0,327	0/1:142,31:155:99:1180,0,1512	0/0:22,0:22:61.81:0,62,761	0/0:15,0:15:45.11:0,45,576	0/1:154,67:194:99:2069,0,1767	1/1:61,146:194:99:5417,194,0	0/1:64,0:62:28.44:28,0,509	0/1:25,80:99:0.60:2375,0,1
chr10	83479285	.	T	TAG	70644.49	PASS	AB=0.709;AC=16;AF=0.286;AN=56;BaseQRankSum=24.814;DP=2632;DS;FS=9.141;HRun=0;HaplotypeScore=445.1916;InbreedingCoeff=-0.0501;MQ=53.92;MQ0=19;MQRankSum=-24.258;QD=31.41;ReadPosRankSum=5.384;VQSLOD=2.1536;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:84,13:94:99:334,0,3572	0/0:10,0:10:30.06:0,30,435	0/0:28,0:27:78.24:0,78,1207	0/0:30,0:30:62.57:0,63,1158	0/1:45,201:220:99:6882,0,823	0/0:20,0:20:57.19:0,57,926	0/1:54,11:62:99:245,0,2404	0/1:57,13:70:99:269,0,2410	0/0:28,0:28:81.28:0,81,1319	0/0:44,0:44:99:0,126,2043	0/0:18,0:18:54.17:0,54,857	0/0:36,0:36:99:0,108,1653	0/1:33,202:222:99:8982,0,709	0/1:31,209:212:99:8486,0,709	0/0:34,0:34:96.33:0,96,1561	0/0:31,0:31:90.31:0,90,1469	0/0:14,0:14:42.09:0,42,631	0/0:21,0:21:60.20:0,60,979	0/1:42,4:46:99:114,0,1737	0/1:61,10:70:99:285,0,2652	0/1:40,205:241:99:9593,0,593	0/1:48,199:225:99:9087,0,940	0/0:23,0:23:69.24:0,69,1125	0/0:46,0:46:99:0,138,2249	0/1:27,206:202:99:8807,0,520	1/1:18,231:218:99:12123,568,0	0/1:67,11:77:99:376,0,3028	1/1:5,101:99:99:5060,253,0
chr10	83479636	.	GGCATTA	G	7412.15	PASS	AB=0.664;AC=6;AF=0.107;AN=56;BaseQRankSum=20.211;DP=1092;FS=226.075;HRun=0;HaplotypeScore=346.4484;InbreedingCoeff=-0.1207;MQ=60.61;MQ0=0;MQRankSum=-19.950;QD=18.30;ReadPosRankSum=9.106;VQSLOD=0.2365;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,154,5467	0/0:8,0:8:21.07:0,21,762	0/0:13,0:13:18.53:0,19,591	0/0:10,0:9:20.99:0,21,623	0/1:36,60:88:99:1720,0,2745	0/0:22,0:22:63.22:0,63,2280	0/0:48,1:48:99:0,144,5098	0/0:48,0:48:99:0,132,4515	0/0:26,0:26:78.25:0,78,2816	0/0:16,0:16:42.14:0,42,1519	0/0:11,0:11:27.09:0,27,1008	0/0:20,0:20:60.21:0,60,2212	0/1:43,9:52:70.25:70,0,4532	0/0:45,5:50:37.38:0,37,4793	0/0:25,0:25:75.26:0,75,2728	0/0:38,0:38:99:0,114,4223	0/0:21,0:21:63.22:0,63,2372	0/0:10,0:10:30.10:0,30,1110	0/0:34,0:34:99:0,99,3363	0/0:45,1:46:74.39:0,74,4383	0/0:68,0:67:99:0,202,7088	0/1:47,55:95:99:1909,0,3699	0/0:15,0:15:39.13:0,39,1464	0/0:38,0:38:99:0,114,3946	0/1:28,47:63:99:1600,0,2572	0/1:21,22:42:99:990,0,1363	0/0:61,0:61:99:0,181,6580	0/1:11,26:35:99:1122,0,827
chr10	83479645	.	A	AGG	4452.95	PASS	AB=0.631;AC=5;AF=0.089;AN=56;BaseQRankSum=20.256;DP=1083;FS=254.008;HRun=0;HaplotypeScore=280.3228;InbreedingCoeff=-0.1099;MQ=60.70;MQ0=0;MQRankSum=-20.168;QD=12.44;ReadPosRankSum=8.557;VQSLOD=0.6328;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,175,2709	0/0:8,0:8:21.07:0,21,340	0/0:8,0:8:13.98:0,14,164	0/0:9,0:9:17.79:0,18,231	0/1:34,60:86:99:1015,0,1161	0/0:20,0:20:60.20:0,60,979	0/0:48,1:48:99:0,141,2221	0/0:44,0:44:99:0,126,2027	0/0:25,0:25:75.26:0,75,1224	0/0:14,0:14:42.14:0,42,665	0/0:10,0:10:30.10:0,30,490	0/0:25,0:25:72.25:0,72,1174	0/0:42,9:51:0.32:0,0,1833	0/0:46,5:51:77.41:0,77,2158	0/0:27,0:27:81.24:0,81,1228	0/0:40,0:40:99:0,117,1906	0/0:22,0:22:66.23:0,66,1077	0/0:13,0:13:36.12:0,36,583	0/0:31,0:31:93.24:0,93,1410	0/0:44,1:45:89.89:0,90,1918	0/0:60,0:59:99:0,175,2785	0/1:48,55:96:99:1153,0,1469	0/0:15,0:15:39.13:0,39,636	0/0:34,0:34:99:0,102,1639	0/1:33,46:67:99:966,0,1045	0/1:21,22:42:99:605,0,834	0/0:64,0:64:99:0,187,2975	0/1:13,26:37:99:714,0,461
chr10	83479754	.	CACA	C	629.05	PASS	AB=0.769;AC=4;AF=0.071;AN=56;BaseQRankSum=8.534;DP=1440;FS=16.846;HRun=0;HaplotypeScore=212.8700;InbreedingCoeff=-0.0769;MQ=51.69;MQ0=32;MQRankSum=-8.368;QD=2.11;ReadPosRankSum=-1.899;VQSLOD=1.2611;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:93,0:92:99:0,265,5929	0/0:12,0:12:36.11:0,36,772	0/0:37,0:14:35.79:0,36,683	0/0:26,0:17:36.09:0,36,674	0/0:89,25:79:67.53:0,68,2380	0/0:29,0:29:84.29:0,84,1900	0/0:64,0:61:99:0,175,3836	0/0:63,2:58:99:0,165,3476	0/0:31,0:31:87.24:0,87,1836	0/0:27,0:27:75.23:0,75,1551	0/0:23,0:23:63.16:0,63,1214	0/0:25,0:25:75.26:0,75,1668	0/0:75,2:75:99:0,128,3804	0/0:66,3:63:99:0,153,3332	0/0:43,0:43:99:0,123,2667	0/0:40,0:40:99:0,120,2632	0/0:28,0:28:84.29:0,84,1871	0/0:25,0:25:69.18:0,69,1515	0/0:54,1:46:99:0,129,2847	0/0:60,0:56:99:0,162,3551	0/0:81,0:79:99:0,232,5055	0/1:104,19:92:99:128,0,3203	0/0:19,0:19:33.09:0,33,747	0/0:35,0:35:99:0,102,2261	0/1:83,33:92:99:308,0,3330	0/1:27,11:29:99:230,0,974	0/0:64,0:64:99:0,181,4021	0/1:10,11:16:72.63:73,0,446
chr10	83480649	.	G	GC	411.41	PASS	AB=0.724;AC=6;AF=0.115;AN=52;BaseQRankSum=7.350;DP=1642;DS;FS=9.659;HRun=4;HaplotypeScore=170.6440;InbreedingCoeff=0.1735;MQ=40.79;MQ0=110;MQRankSum=-8.350;QD=1.92;ReadPosRankSum=1.951;VQSLOD=-0.5281;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,10:12:17.09:17,0,127	0/0:10,0:10:9.02:0,9,102	./.	./.	0/0:166,15:157:4.83:0,5,1687	0/0:22,0:22:27.08:0,27,306	1/1:8,10:7:15.01:184,15,0	0/0:6,1:3:5.85:0,6,34	0/0:24,0:24:5.02:0,5,395	0/0:32,0:31:84.22:0,84,942	0/0:15,0:15:20.99:0,21,212	0/0:36,3:37:60.08:0,60,650	0/0:137,10:127:74.27:0,74,1489	0/0:144,27:147:19.40:0,19,1537	0/0:37,1:36:39.07:0,39,429	0/0:31,0:31:45.13:0,45,510	0/0:23,0:23:42.12:0,42,476	0/0:26,0:24:26.88:0,27,293	0/1:9,6:11:70.04:99,0,70	0/0:12,0:8:14.84:0,15,107	0/0:158,15:155:60.96:0,61,2282	0/0:132,10:111:12.23:0,12,1014	0/0:31,0:31:48.11:0,48,544	0/0:25,0:25:42.12:0,42,476	0/1:122,13:121:98.34:98,0,1150	0/0:125,16:130:99:0,115,3261	0/1:6,16:9:30.62:138,0,31	0/0:43,1:37:68.97:0,69,727
chr10	83480877	.	TG	T	10035.85	PASS	AB=0.647;AC=8;AF=0.143;AN=56;BaseQRankSum=17.866;DP=1497;FS=21.099;HRun=2;HaplotypeScore=280.2989;InbreedingCoeff=-0.1709;MQ=56.56;MQ0=18;MQRankSum=-14.155;QD=10.27;ReadPosRankSum=-0.395;VQSLOD=0.6754;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:16:42.14:0,42,619	0/0:10,1:11:30.10:0,30,446	0/0:47,0:36:94.96:0,95,1264	0/0:53,1:47:31.09:0,31,1263	0/1:66,73:116:99:950,0,1514	0/0:37,0:37:93.31:0,93,1391	0/0:7,0:5:15.05:0,15,224	0/0:9,0:9:27.04:0,27,358	0/0:32,0:31:81.27:0,81,1209	0/0:33,0:31:87.18:0,87,1215	0/0:20,0:20:60.10:0,60,850	0/0:36,0:34:87.25:0,87,1225	0/1:48,79:110:99:1533,0,1104	0/1:60,60:108:99:1049,0,1460	0/0:37,0:34:87.26:0,87,1236	0/0:24,0:24:60.18:0,60,860	0/0:25,0:25:75.22:0,75,1063	0/0:20,0:19:53.95:0,54,807	0/0:19,0:18:48.11:0,48,672	0/0:8,4:7:15.05:0,15,216	0/1:135,42:164:99:382,0,4866	0/1:50,76:104:99:1441,0,1289	0/0:32,0:32:90.16:0,90,1229	0/0:40,0:39:99:0,114,1660	0/1:60,65:109:99:1463,0,1736	0/1:26,106:108:99:2988,0,394	0/0:5,0:4:9.03:0,9,134	0/1:10,21:25:99:229,0,352
chr10	83480979	.	A	AG	27884.54	PASS	AB=0.632;AC=17;AF=0.340;AN=50;BaseQRankSum=11.532;DP=1387;FS=6.433;HRun=0;HaplotypeScore=253.0547;InbreedingCoeff=0.2983;MQ=52.72;MQ0=24;MQRankSum=-12.935;QD=25.28;ReadPosRankSum=-1.598;VQSLOD=3.3088;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:12.04:166,12,0	0/0:5,0:5:15.01:0,15,188	0/0:12,0:5:10.58:0,11,130	0/0:14,0:10:24.07:0,24,313	0/1:38,125:139:99:3384,0,278	0/0:24,0:24:27.37:0,27,865	./.	./.	0/1:25,0:25:8.44:8,0,888	0/0:16,0:16:45.15:0,45,622	0/0:17,0:17:43.02:0,43,573	0/0:25,0:25:75.23:0,75,1014	0/1:33,96:113:99:2718,0,797	0/1:32,87:107:99:2734,0,799	0/0:37,0:37:28.07:0,28,1350	0/0:16,0:16:48.16:0,48,670	0/0:39,0:39:75.18:0,75,1513	0/0:20,0:20:57.12:0,57,755	1/1:2,0:2:6.02:78,6,0	1/1:10,0:5:0.82:17,1,0	0/1:41,143:172:99:4718,0,836	0/1:35,97:110:99:2694,0,451	0/0:18,0:18:50.90:0,51,690	0/0:34,0:34:99:0,102,1407	0/1:30,98:114:99:3412,0,99	1/1:3,123:114:99:5142,328,0	./.	1/1:4,73:75:99:2813,180,0
chr10	83481219	.	CAT	C	21129.87	PASS	AC=18;AF=0.391;AN=46;BaseQRankSum=19.952;DP=1420;DS;FS=44.284;HRun=0;HaplotypeScore=196.2047;InbreedingCoeff=0.9803;MQ=52.33;MQ0=32;MQRankSum=-4.385;QD=20.78;ReadPosRankSum=5.055;VQSLOD=3.1366;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:6:18.06:0,18,330	0/0:22,0:18:51.16:0,51,889	0/0:30,0:26:72.25:0,72,1247	1/1:22,81:84:99:2152,153,0	0/0:23,0:23:63.22:0,63,1155	./.	./.	0/0:23,0:23:63.18:0,63,1091	0/0:28,1:29:84.28:0,84,1505	0/0:17,0:17:51.17:0,51,929	0/0:26,0:26:72.23:0,72,1283	1/1:6,136:129:99:2508,177,0	1/1:12,153:134:99:3391,237,0	0/0:45,0:45:99:0,129,2350	0/0:30,0:30:90.31:0,90,1650	0/0:53,0:53:99:0,150,2694	0/0:25,0:25:72.25:0,72,1304	./.	1/1:0,2:2:6.02:85,6,0	1/1:17,203:193:99:3437,240,0	1/1:5,101:93:99:2578,181,0	0/0:28,1:29:41.44:0,41,1427	0/0:42,0:42:99:0,126,2301	1/1:0,108:94:99:2793,196,0	1/1:13,113:99:99:3210,180,0	./.	1/1:4,41:35:69.23:976,69,0
chr10	83482208	.	AC	A	380.72	PASS	AB=0.806;AC=4;AF=0.080;AN=50;BaseQRankSum=13.001;DP=1723;DS;FS=72.499;HRun=2;HaplotypeScore=308.6862;InbreedingCoeff=0.2723;MQ=56.87;MQ0=24;MQRankSum=-12.185;QD=2.56;ReadPosRankSum=-0.529;VQSLOD=-0.7192;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:2,1:3:29.65:30,0,37	0/0:9,0:9:18.06:0,18,267	0/0:34,0:25:75.25:0,75,1112	0/0:29,0:18:42.30:0,42,698	0/0:161,8:166:99:0,146,5588	0/0:29,0:28:81.26:0,81,1192	1/1:1,2:1:3.01:39,3,0	./.	0/0:35,0:35:99:0,105,1567	0/0:45,0:44:99:0,126,1853	0/0:23,0:23:63.21:0,63,941	0/0:40,0:40:99:0,114,1703	0/1:120,23:140:99:413,0,4092	0/0:160,13:170:18.06:0,18,5638	0/0:29,0:29:78.22:0,78,1108	0/0:39,0:39:99:0,105,1571	0/0:28,0:28:84.28:0,84,1258	0/0:21,0:21:60.20:0,60,897	0/0:2,0:1:3.01:0,3,43	./.	0/0:238,12:235:99:0,455,8592	0/0:163,12:171:62.77:0,63,5383	0/0:40,0:40:99:0,108,1616	0/0:25,0:25:75.25:0,75,1124	0/0:143,9:147:99:0,119,4729	0/0:158,2:159:99:0,437,6933	./.	0/0:64,0:63:99:0,184,2737
chr10	83482344	.	AC	A	375.31	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=11.232;DP=1828;DS;FS=21.800;HRun=2;HaplotypeScore=313.7777;InbreedingCoeff=0.8908;MQ=66.18;MQ0=1;MQRankSum=-11.251;QD=15.01;ReadPosRankSum=-2.625;VQSLOD=-0.0098;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:8:23.95:268,24,0	0/0:11,0:11:33.11:0,33,523	0/0:34,0:34:99:0,102,1521	0/0:31,0:31:87.29:0,87,1365	0/0:154,1:153:90.74:0,91,5874	0/0:29,0:28:84.24:0,84,1272	1/1:3,2:3:5.98:62,6,0	0/0:5,0:2:6.02:0,6,96	0/0:36,0:36:99:0,105,1675	0/0:33,0:33:99:0,99,1535	0/0:25,0:25:75.26:0,75,1196	0/0:39,0:39:99:0,117,1822	0/0:184,0:183:99:0,497,7752	0/0:164,0:162:99:0,448,6943	0/0:32,0:32:93.32:0,93,1486	0/0:48,0:48:99:0,141,2221	0/0:29,0:29:87.30:0,87,1390	0/0:33,0:33:91.84:0,92,1418	./.	1/1:1,3:2:5.97:61,6,0	0/0:239,8:240:99:0,578,10379	0/0:185,3:183:99:0,197,6899	0/0:28,0:28:78.23:0,78,1197	0/0:37,0:37:99:0,111,1698	0/0:175,0:173:99:0,178,7307	0/0:191,3:191:99:0,563,8759	1/1:0,4:3:9.03:125,9,0	0/0:46,0:46:99:0,135,2104
chr10	83482750	.	A	AT	78.07	PASS	AC=4;AF=0.080;AN=50;BaseQRankSum=8.728;DP=1659;DS;FS=84.420;HRun=0;HaplotypeScore=369.4411;InbreedingCoeff=0.7777;MQ=56.82;MQ0=15;MQRankSum=-8.319;QD=6.51;ReadPosRankSum=-1.008;VQSLOD=0.6965;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:6:18.06:0,18,251	0/0:20,0:17:27.79:0,28,570	0/0:12,0:10:23.11:0,23,297	0/0:161,1:146:99:0,319,4495	0/0:26,0:26:74.92:0,75,1007	1/1:6,2:3:3.01:44,3,0	./.	0/0:34,0:34:96.32:0,96,1341	0/0:20,0:19:54.16:0,54,721	0/0:18,0:18:51.17:0,51,709	0/0:27,0:27:75.02:0,75,999	0/0:165,7:161:99:0,155,4414	0/0:194,11:191:77.41:0,77,4970	0/0:35,0:35:99:0,102,1376	0/0:26,0:26:75.23:0,75,1030	0/0:30,0:30:87.28:0,87,1196	0/0:15,0:15:45.11:0,45,606	./.	1/1:0,4:3:9.03:133,9,0	0/0:214,0:211:99:0,581,8039	0/0:137,2:131:99:0,282,4015	0/0:10,0:10:27.09:0,27,373	0/0:29,0:29:84.28:0,84,1171	0/0:165,7:162:99:0,191,5125	0/0:179,6:176:99:0,446,6473	0/0:2,9:1:3.01:0,3,41	0/0:70,2:70:99:0,155,2488
chr10	83482805	.	CAA	C	4960.43	PASS	AB=0.784;AC=14;AF=0.269;AN=52;BaseQRankSum=16.694;DP=1816;DS;FS=262.216;HRun=2;HaplotypeScore=454.5477;InbreedingCoeff=-0.0317;MQ=56.05;MQ0=11;MQRankSum=-18.563;QD=3.36;ReadPosRankSum=-2.141;VQSLOD=-0.0381;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:13,0:13:36.12:0,36,730	0/0:17,0:14:33.10:0,33,624	0/0:10,0:8:15.01:0,15,239	0/1:139,41:162:99:260,0,7121	0/0:18,0:18:51.17:0,51,1017	1/1:4,2:1:3.01:49,3,0	0/1:3,7:6:42.79:43,0,55	0/0:34,0:34:99:0,102,2033	0/0:32,0:32:96.31:0,96,1837	0/0:17,0:16:48.16:0,48,975	0/0:32,0:32:96.31:0,96,1912	0/1:160,38:187:99:917,0,7374	0/1:158,46:193:99:1134,0,7582	0/0:34,0:34:99:0,102,2054	0/0:35,0:35:99:0,105,2085	0/0:32,0:32:93.32:0,93,1869	0/0:15,0:15:45.15:0,45,897	./.	1/1:0,7:6:15.05:244,15,0	0/1:208,35:237:99:198,0,10656	0/1:116,30:136:99:196,0,5736	0/0:19,0:19:51.17:0,51,987	0/0:25,0:25:75.26:0,75,1508	0/1:141,43:170:99:1014,0,6910	0/1:179,38:202:99:539,0,9644	0/1:2,6:3:39.81:40,0,59	0/1:60,13:72:99:326,0,3170
chr10	83483015	.	G	GA	4325.49	PASS	AB=0.808;AC=9;AF=0.167;AN=54;BaseQRankSum=3.560;DP=1933;DS;FS=2.190;HRun=0;HaplotypeScore=341.8767;InbreedingCoeff=-0.2151;MQ=47.50;MQ0=118;MQRankSum=-2.479;QD=3.75;ReadPosRankSum=-0.043;VQSLOD=3.7769;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,7:14:15.05:0,15,209	0/0:14,0:13:39.13:0,39,545	0/0:41,0:3:2.08:0,2,41	./.	0/1:136,22:129:99:161,0,3374	0/0:22,0:22:66.19:0,66,901	0/0:18,5:13:17.96:0,18,206	0/1:12,11:3:32.64:33,0,74	0/0:22,0:22:63.21:0,63,881	0/0:32,0:31:90.28:0,90,1216	0/0:17,0:17:45.15:0,45,626	0/0:44,0:44:99:0,126,1740	0/1:168,16:169:32.99:33,0,5214	0/0:187,17:189:99:0,110,5985	0/0:30,0:30:87.26:0,87,1168	0/0:20,0:20:60.19:0,60,822	0/0:40,0:40:99:0,117,1566	0/0:22,0:22:63.18:0,63,844	0/1:10,6:6:38.91:39,0,75	0/0:6,3:5:9.03:0,9,125	0/1:213,36:211:99:423,0,4137	0/1:160,31:163:99:276,0,4211	0/0:21,0:20:51.11:0,51,657	0/0:28,0:28:84.26:0,84,1139	0/0:119,19:116:13.90:0,14,2895	0/1:160,77:217:99:2327,0,5210	0/1:17,2:15:17.69:18,0,345	0/1:39,31:67:99:1016,0,1280
chr10	83484010	.	A	AATTT	4641.17	PASS	AB=0.754;AC=11;AF=0.229;AN=48;BaseQRankSum=15.973;DP=998;FS=20.270;HRun=0;HaplotypeScore=232.3145;InbreedingCoeff=0.0905;MQ=51.20;MQ0=42;MQRankSum=-15.434;QD=11.21;ReadPosRankSum=0.273;VQSLOD=2.4417;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:11,0:11:33.11:0,33,692	0/0:23,0:4:12.03:0,12,187	0/0:29,0:6:15.04:0,15,275	0/1:28,24:43:99:621,0,922	0/0:28,0:28:81.28:0,81,1699	./.	1/1:1,3:4:9.03:189,9,0	0/0:31,0:31:93.29:0,93,1857	0/0:16,0:16:48.16:0,48,999	0/0:23,0:23:69.24:0,69,1447	0/0:26,0:26:78.25:0,78,1571	0/1:31,16:46:99:674,0,1553	0/1:39,18:53:99:808,0,1768	0/0:36,0:36:99:0,108,2203	0/0:32,0:32:96.33:0,96,1987	0/0:29,0:29:84.29:0,84,1762	0/0:15,0:15:45.15:0,45,906	./.	1/1:0,3:2:3.01:57,3,0	0/0:212,12:224:99:0,439,12518	0/1:29,16:40:99:445,0,1049	0/0:18,0:18:51.18:0,51,1070	0/0:28,0:28:84.25:0,84,1705	0/1:34,37:60:99:1162,0,1459	0/1:84,26:101:99:615,0,4091	./.	0/1:21,3:23:69.71:70,0,1067
chr10	83484014	.	TGAA	T	1572.88	PASS	AB=0.751;AC=11;AF=0.229;AN=48;BaseQRankSum=15.363;DP=997;FS=33.279;HRun=0;HaplotypeScore=227.5558;InbreedingCoeff=0.1047;MQ=51.34;MQ0=40;MQRankSum=-14.947;QD=3.85;ReadPosRankSum=2.415;VQSLOD=1.2988;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:12,0:12:36.12:0,36,886	0/0:22,0:2:6.02:0,6,147	0/0:28,0:4:12.04:0,12,229	0/1:28,25:43:99:196,0,1089	0/0:29,0:29:84.29:0,84,2046	./.	1/1:0,3:3:9.03:107,9,0	0/0:30,0:30:90.29:0,90,2159	0/0:19,0:19:57.20:0,57,1389	0/0:23,0:23:69.24:0,69,1698	0/0:25,0:25:75.24:0,75,1763	0/1:30,16:45:99:271,0,1871	0/1:34,18:48:99:327,0,1936	0/0:37,0:37:99:0,108,2606	0/0:32,0:32:96.30:0,96,2263	0/0:29,0:29:87.30:0,87,2137	0/0:15,0:15:42.14:0,42,1031	./.	1/1:0,3:2:3.01:30,3,0	0/0:215,12:227:99:0,552,15408	0/1:27,16:38:99:164,0,1117	0/0:18,0:18:51.18:0,51,1256	0/0:29,0:29:87.30:0,87,2115	0/1:37,37:63:99:452,0,1778	0/1:85,26:102:99:164,0,5077	./.	0/1:21,3:23:1.65:2,0,1314
chr10	83484016	.	A	AT	2809.33	PASS	AB=0.952;AC=11;AF=0.229;AN=48;BaseQRankSum=15.948;DP=1010;FS=21.751;HRun=0;HaplotypeScore=191.3560;InbreedingCoeff=0.0852;MQ=52.02;MQ0=39;MQRankSum=-15.565;QD=6.75;ReadPosRankSum=2.377;VQSLOD=1.9972;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:13,0:13:39.10:0,39,525	0/0:23,0:4:6.02:0,6,80	0/0:29,0:5:12.03:0,12,132	0/1:45,8:43:99:369,0,573	0/0:29,0:29:84.21:0,84,1151	./.	1/1:3,0:3:9.03:114,9,0	0/0:29,0:29:87.29:0,87,1213	0/0:21,0:21:60.19:0,60,814	0/0:23,0:23:69.23:0,69,963	0/0:24,0:24:72.21:0,72,984	0/1:47,0:46:99:416,0,1011	0/1:52,1:49:99:511,0,1066	0/0:37,0:37:99:0,108,1472	0/0:31,0:31:93.30:0,93,1282	0/0:31,0:31:93.28:0,93,1265	0/0:14,0:14:42.14:0,42,586	./.	1/1:3,0:2:3.01:37,3,0	0/0:228,0:228:99:0,520,8691	0/1:39,5:38:99:336,0,590	0/0:19,0:19:51.17:0,51,713	0/0:30,0:30:90.25:0,90,1217	0/1:69,6:64:99:851,0,884	0/1:110,1:102:99:307,0,2748	./.	0/1:27,0:26:10.64:11,0,774
chr10	83484124	.	TCA	T	197.47	PASS	AB=0.786;AC=6;AF=0.130;AN=46;BaseQRankSum=11.889;DP=1102;FS=4.133;HRun=0;HaplotypeScore=258.2634;InbreedingCoeff=0.1422;MQ=55.81;MQ0=12;MQRankSum=-11.001;QD=0.80;ReadPosRankSum=-0.949;VQSLOD=2.2652;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:14,0:14:42.13:0,42,778	0/0:15,0:14:39.12:0,39,721	0/0:20,0:19:51.13:0,51,924	0/1:60,25:66:55.18:55,0,2056	0/0:30,0:30:90.31:0,90,1729	./.	./.	0/0:30,0:30:87.28:0,87,1647	0/0:28,0:28:81.28:0,81,1556	0/0:16,0:16:48.16:0,48,912	0/0:23,0:23:60.18:0,60,1123	0/1:57,12:68:26.50:26,0,2238	0/0:53,8:57:75.98:0,76,2248	0/0:37,0:37:99:0,105,2020	0/0:33,0:33:93.32:0,93,1788	0/0:37,0:37:99:0,102,1968	0/0:23,0:23:66.23:0,66,1272	./.	1/1:7,5:7:5.98:46,6,0	0/0:206,0:205:99:0,599,11467	0/0:56,24:66:1.12:0,1,2219	0/0:24,0:24:69.24:0,69,1306	0/0:17,0:17:51.17:0,51,984	0/1:29,21:35:99:172,0,929	0/0:124,30:133:99:0,232,6238	./.	0/1:24,7:29:14.15:14,0,1134
chr10	83484128	.	TAAGCA	T	1160.24	PASS	AB=0.780;AC=7;AF=0.152;AN=46;BaseQRankSum=11.778;DP=1091;FS=5.177;HRun=0;HaplotypeScore=317.6673;InbreedingCoeff=0.0976;MQ=55.56;MQ0=11;MQRankSum=-10.904;QD=3.63;ReadPosRankSum=-0.204;VQSLOD=1.2272;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:13,0:13:39.13:0,39,1265	0/0:15,0:14:42.10:0,42,1148	0/0:20,0:19:54.18:0,54,1596	0/1:60,25:68:99:259,0,3178	0/0:29,0:29:87.27:0,87,2747	./.	./.	0/0:30,0:30:87.30:0,87,2845	0/0:25,0:25:75.26:0,75,2443	0/0:16,0:16:48.14:0,48,1447	0/0:23,0:23:63.22:0,63,2027	0/1:53,12:64:99:211,0,3321	0/0:53,8:58:10.65:0,11,3207	0/0:37,0:37:99:0,105,3478	0/0:32,0:32:93.32:0,93,3041	0/0:37,0:37:99:0,105,3335	0/0:22,0:22:63.22:0,63,2099	./.	1/1:5,5:6:6.02:94,6,0	0/0:210,0:209:99:0,617,19496	0/1:57,24:68:99:151,0,3610	0/0:25,0:25:72.25:0,72,2268	0/0:17,0:17:51.17:0,51,1615	0/1:28,21:34:99:460,0,1467	0/0:122,30:133:99:0,159,10595	./.	0/1:23,7:28:99:110,0,2042
chr10	83484152	.	GT	G	1344.35	PASS	AB=0.749;AC=7;AF=0.152;AN=46;BaseQRankSum=13.239;DP=1127;FS=6.185;HRun=2;HaplotypeScore=220.2436;InbreedingCoeff=0.1238;MQ=50.45;MQ0=44;MQRankSum=-12.198;QD=3.70;ReadPosRankSum=-1.776;VQSLOD=-0.5588;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:11,0:11:33.08:0,33,470	0/0:18,0:9:27.09:0,27,401	0/0:23,0:12:32.97:0,33,431	0/1:65,46:86:99:356,0,1917	0/0:25,0:25:69.23:0,69,1015	./.	./.	0/0:27,0:27:78.26:0,78,1169	0/0:28,0:28:84.28:0,84,1256	0/0:14,0:14:42.11:0,42,572	0/0:16,0:16:45.15:0,45,674	0/1:49,13:61:99:199,0,1692	0/0:44,11:51:12.71:0,13,1604	0/0:36,0:36:99:0,99,1434	0/0:29,0:29:84.24:0,84,1232	0/0:39,0:39:99:0,99,1459	0/0:25,0:25:69.23:0,69,1032	./.	1/1:0,8:4:9.03:117,9,0	0/0:193,0:193:99:0,557,8202	0/1:46,33:63:99:235,0,1663	0/0:26,0:26:75.24:0,75,1104	0/0:19,0:19:51.16:0,51,743	0/1:36,33:46:99:493,0,990	0/0:123,41:141:99:0,209,5015	./.	0/1:27,7:30:71.23:71,0,987
chr10	83484936	.	AACACACAGACACAG	A	2217.22	PASS	AB=0.868;AC=6;AF=0.130;AN=46;BaseQRankSum=4.070;DP=1000;FS=3.575;HRun=0;HaplotypeScore=447.9625;InbreedingCoeff=0.1232;MQ=49.22;MQ0=8;MQRankSum=-4.615;QD=10.51;ReadPosRankSum=-1.617;VQSLOD=0.4023;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:13,0:13:33.11:0,33,1630	0/0:29,0:14:32.76:0,33,972	0/0:24,0:8:13.81:0,14,384	0/0:85,7:79:35.13:0,35,3010	0/0:21,0:21:33.11:0,33,1987	./.	1/1:7,0:4:2.98:21,3,0	0/0:18,0:18:39.13:0,39,2151	0/0:25,0:25:49.05:0,49,2900	0/0:11,0:11:24.07:0,24,1036	0/0:25,0:25:60.21:0,60,3550	0/1:27,5:30:99:412,0,1077	0/1:20,10:28:99:1058,0,167	0/0:26,0:26:72.20:0,72,3838	0/0:17,0:17:45.13:0,45,2095	0/0:30,0:30:78.27:0,78,4795	0/0:34,0:34:72.24:0,72,3876	./.	./.	0/0:218,0:216:99:0,397,22777	0/1:66,6:64:99:295,0,2849	0/0:21,0:21:48.15:0,48,2865	0/0:28,0:28:59.95:0,60,3543	0/1:65,5:57:99:547,0,3162	0/0:101,0:98:99:0,214,9143	./.	0/0:40,0:40:81.03:0,81,3706
chr10	83485008	.	CAGAG	C	650.28	PASS	AB=1.000;AC=17;AF=0.500;AN=34;BaseQRankSum=-4.172;DP=778;FS=12.956;HRun=0;HaplotypeScore=225.6515;InbreedingCoeff=0.5742;MQ=42.43;MQ0=10;MQRankSum=3.285;QD=1.74;ReadPosRankSum=2.278;VQSLOD=1.5991;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:5,2:6:3.01:36,3,0	./.	./.	./.	0/1:13,0:13:8.35:38,0,8	./.	./.	0/0:10,0:13:0.47:0,0,1	1/1:11,0:13:6.01:66,6,0	./.	1/1:12,0:13:5.85:85,6,0	0/0:36,0:36:24.80:0,25,247	0/0:42,0:41:20.78:0,21,186	1/1:23,6:30:11.98:139,12,0	./.	1/1:24,9:32:12.50:167,12,0	1/1:16,4:20:3.01:46,3,0	./.	0/0:6,0:6:0:0,0,0	1/1:199,1:194:4.67:68,5,0	0/0:21,0:19:5.06:0,5,22	./.	1/1:30,13:43:9.02:138,9,0	0/0:35,0:30:5.76:0,6,76	0/0:95,0:89:46.01:0,46,682	./.	0/0:24,0:23:12.09:0,12,98
chr10	83485036	.	G	GAACA	1717.54	PASS	AB=0.948;AC=8;AF=0.190;AN=42;BaseQRankSum=11.554;DP=779;FS=18.508;HRun=0;HaplotypeScore=248.6269;InbreedingCoeff=-0.0034;MQ=40.58;MQ0=40;MQRankSum=-9.643;QD=5.94;ReadPosRankSum=3.930;VQSLOD=1.1449;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:4:3.01:0,3,46	./.	0/0:34,0:6:10.27:0,10,114	0/1:40,1:31:44.59:45,0,458	0/0:16,0:15:24.55:0,25,429	./.	./.	0/0:17,0:15:21.55:0,22,408	0/0:17,0:17:42.11:0,42,708	0/0:6,0:6:9.03:0,9,178	0/0:15,0:15:29.51:0,30,495	0/1:33,3:36:99:200,0,558	0/1:35,7:39:99:511,0,283	0/0:30,0:30:57.19:0,57,1055	0/0:11,0:10:18.06:0,18,355	0/0:32,0:30:60.49:0,60,1067	0/0:17,0:17:36.58:0,37,617	./.	./.	0/0:203,0:196:99:0,194,3525	1/1:14,2:14:8.47:145,8,0	0/0:11,0:11:6.02:0,6,118	0/0:46,0:46:63.20:0,63,1139	0/1:35,0:30:94.97:95,0,176	0/1:85,7:85:99:767,0,2422	./.	0/1:27,0:23:81.69:82,0,508
chr10	83485054	.	G	GGCCT	4109.86	PASS	AB=0.763;AC=7;AF=0.159;AN=44;BaseQRankSum=11.877;DP=731;FS=5.627;HRun=0;HaplotypeScore=235.2526;InbreedingCoeff=-0.2097;MQ=43.66;MQ0=46;MQRankSum=-9.421;QD=16.37;ReadPosRankSum=6.427;VQSLOD=2.2487;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:5,0:3:3.01:0,3,46	0/0:31,0:6:18.04:0,18,315	0/0:63,0:18:38.61:0,39,663	0/1:23,5:23:99:214,0,425	0/0:20,0:19:43.39:0,43,823	./.	./.	0/0:17,0:17:29.98:0,30,515	0/0:14,0:14:34.92:0,35,582	0/0:6,0:6:12.04:0,12,236	0/0:17,0:17:38.81:0,39,705	0/1:25,9:33:99:434,0,575	0/1:18,17:34:99:912,0,170	0/0:27,0:27:45.06:0,45,704	0/0:11,0:10:18.05:0,18,317	0/0:30,0:29:37.39:0,37,956	0/0:17,0:17:30.55:0,31,559	./.	./.	0/0:156,1:153:99:0,199,3998	0/1:10,7:15:99:438,0,106	0/0:10,0:9:5.99:0,6,125	0/0:45,0:45:51.14:0,51,850	0/1:28,4:30:99:179,0,634	0/1:49,27:73:99:1569,0,1230	./.	0/1:16,7:21:99:363,0,335
chr10	83485622	.	C	CT	8247.75	PASS	AB=0.625;AC=13;AF=0.260;AN=50;BaseQRankSum=21.357;DP=985;FS=70.316;HRun=1;HaplotypeScore=184.3458;InbreedingCoeff=0.1643;MQ=55.16;MQ0=8;MQRankSum=-18.577;QD=15.36;ReadPosRankSum=0.772;VQSLOD=1.3570;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:8,0:8:24.05:0,24,310	0/0:24,0:22:66.16:0,66,872	0/0:24,0:24:65.73:0,66,803	0/1:34,73:84:99:1455,0,1015	0/0:21,0:21:63.20:0,63,866	1/1:0,3:2:6.02:90,6,0	./.	0/0:27,0:27:78.26:0,78,1091	0/0:32,0:32:96.30:0,96,1299	0/0:13,0:13:32.88:0,33,401	0/0:30,0:30:90.29:0,90,1240	0/1:24,33:54:99:971,0,859	0/1:26,30:53:99:886,0,890	0/0:22,0:22:66.21:0,66,904	0/0:25,0:25:75.25:0,75,1049	0/0:27,0:27:81.27:0,81,1132	0/0:18,0:18:54.14:0,54,719	./.	1/1:0,2:1:3.01:45,3,0	0/0:132,1:132:99:0,379,5127	0/1:34,63:70:99:1351,0,948	0/0:19,0:19:45.13:0,45,615	0/0:24,0:24:69.23:0,69,964	0/1:32,27:51:99:602,0,871	0/1:37,61:91:99:1912,0,1066	1/1:0,4:4:6.02:89,6,0	0/1:14,36:41:99:846,0,442
chr10	83486445	.	G	GT	9862	PASS	AB=0.682;AC=17;AF=0.327;AN=52;BaseQRankSum=20.505;DP=1151;FS=20.108;HRun=3;HaplotypeScore=169.8984;InbreedingCoeff=0.0898;MQ=54.02;MQ0=12;MQRankSum=-12.889;QD=11.56;ReadPosRankSum=0.171;VQSLOD=1.9971;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:2:3.01:30,3,0	0/0:9,0:9:27.07:0,27,313	0/0:30,0:19:54.14:0,54,626	0/1:24,1:11:22.45:22,0,258	0/1:44,58:78:99:831,0,1004	0/0:26,0:26:75.23:0,75,895	./.	./.	0/0:21,0:21:63.18:0,63,745	0/0:18,0:18:51.16:0,51,612	0/0:13,0:13:36.11:0,36,432	0/0:32,0:32:90.26:0,90,1068	0/1:36,44:74:99:969,0,792	0/1:41,42:62:99:951,0,763	0/0:23,0:23:69.20:0,69,817	0/0:33,0:33:96.29:0,96,1152	0/0:20,0:20:60.18:0,60,720	0/0:21,0:21:60.11:0,60,677	1/1:1,1:2:3.01:42,3,0	1/1:0,2:2:2.97:20,3,0	0/1:113,36:144:99:510,0,3169	0/1:36,71:90:99:1417,0,571	0/0:25,0:25:69.17:0,69,802	0/0:22,0:22:60.15:0,60,695	0/1:27,57:68:99:1069,0,572	0/1:54,121:149:99:3390,0,771	1/1:0,6:5:12.04:168,12,0	0/1:15,19:31:99:443,0,227
chr10	83486964	.	C	CG	550.88	PASS	AB=0.878;AC=6;AF=0.125;AN=48;BaseQRankSum=13.866;DP=1111;DS;FS=14.919;HRun=0;HaplotypeScore=246.2270;InbreedingCoeff=0.0696;MQ=65.28;MQ0=17;MQRankSum=-11.704;QD=1.53;ReadPosRankSum=0.417;VQSLOD=1.1833;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:2:5.36:0,5,23	0/0:11,0:11:33.11:0,33,461	0/0:26,0:25:62.08:0,62,867	0/0:26,0:24:62.84:0,63,844	0/0:58,3:47:30.13:0,30,759	0/0:22,0:22:66.20:0,66,904	./.	./.	0/0:25,0:25:75.23:0,75,1029	0/0:24,0:24:72.21:0,72,971	0/0:18,0:18:45.15:0,45,629	0/0:28,0:28:84.25:0,84,1118	0/1:65,13:66:99:450,0,625	0/1:82,10:75:85.06:85,0,1102	0/0:18,0:18:51.14:0,51,665	0/0:19,0:19:54.17:0,54,739	0/0:42,0:42:99:0,126,1706	0/0:40,0:40:99:0,117,1593	1/1:2,0:1:2.04:6,2,0	./.	0/0:240,1:237:99:0,643,8784	0/0:58,3:47:4.69:0,5,635	0/0:22,0:21:57.18:0,57,768	0/0:33,0:33:99:0,99,1351	0/1:50,13:45:99:106,0,656	0/1:115,10:102:13.27:13,0,993	./.	0/0:16,0:15:22.29:0,22,210
chr10	83486965	.	C	CG	840.59	PASS	AB=0.928;AC=6;AF=0.125;AN=48;BaseQRankSum=13.649;DP=1114;DS;FS=13.537;HRun=0;HaplotypeScore=246.1521;InbreedingCoeff=0.1721;MQ=65.31;MQ0=17;MQRankSum=-12.994;QD=2.32;ReadPosRankSum=0.436;VQSLOD=1.5844;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:0:0,0,0	0/0:11,0:11:33.11:0,33,461	0/0:26,0:25:72.07:0,72,907	0/0:26,0:24:65.85:0,66,881	0/0:59,1:46:22.66:0,23,738	0/0:22,0:22:66.21:0,66,906	./.	./.	0/0:25,0:25:75.24:0,75,1030	0/0:25,0:25:72.19:0,72,968	0/0:18,0:18:48.15:0,48,653	0/0:28,0:28:84.25:0,84,1120	0/1:70,5:67:99:546,0,632	0/1:86,4:77:99:126,0,1068	0/0:18,0:18:45.14:0,45,614	0/0:20,0:20:57.16:0,57,761	0/0:41,0:41:99:0,123,1684	0/0:40,0:40:99:0,114,1568	1/1:2,0:1:2.74:12,3,0	./.	0/0:240,4:240:99:0,605,8703	0/0:56,3:45:33.44:0,33,707	0/0:22,0:21:63.15:0,63,814	0/0:33,0:33:99:0,99,1350	0/1:59,1:46:99:103,0,662	0/1:119,5:102:99:166,0,1015	./.	0/0:14,1:15:22.07:0,22,209
chr10	83486967	.	C	CT	8032.27	PASS	AB=0.700;AC=9;AF=0.188;AN=48;BaseQRankSum=17.998;DP=1136;DS;FS=0.571;HRun=0;HaplotypeScore=211.2044;InbreedingCoeff=-0.0425;MQ=65.74;MQ0=18;MQRankSum=-9.399;QD=15.60;ReadPosRankSum=-0.407;VQSLOD=4.9828;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:5.72:0,6,29	0/0:11,0:11:33.11:0,33,460	0/0:28,0:27:77.91:0,78,957	0/0:26,0:25:32.72:0,33,833	0/1:37,26:46:99:641,0,620	0/0:21,0:21:63.21:0,63,875	./.	./.	0/0:26,0:26:78.24:0,78,1057	0/0:24,0:24:72.23:0,72,977	0/0:18,0:18:48.15:0,48,655	0/0:30,0:30:90.24:0,90,1168	0/1:53,31:71:99:1426,0,483	0/1:62,35:76:99:1293,0,928	0/0:16,0:16:45.14:0,45,612	0/0:20,0:20:60.17:0,60,791	0/0:43,0:43:99:0,126,1706	0/0:40,0:40:99:0,117,1580	1/1:0,1:1:3.01:46,3,0	./.	0/0:242,2:240:99:0,615,8797	0/1:37,22:43:99:504,0,547	0/0:22,0:21:63.15:0,63,812	0/0:32,0:32:96.31:0,96,1320	0/1:40,22:45:99:733,0,523	0/1:51,80:106:99:3042,0,403	./.	0/1:8,10:17:99:347,0,128
chr10	83486985	.	G	GA	1898.66	PASS	AB=0.767;AC=13;AF=0.250;AN=52;BaseQRankSum=14.009;DP=1211;DS;FS=1.430;HRun=2;HaplotypeScore=239.3899;InbreedingCoeff=0.3109;MQ=62.63;MQ0=27;MQRankSum=-13.948;QD=4.15;ReadPosRankSum=0.841;VQSLOD=0.2301;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:6.02:86,6,0	0/0:11,0:11:33.10:0,33,409	0/0:34,0:33:90.25:0,90,1085	0/0:27,0:25:69.21:0,69,840	0/0:43,22:44:19.75:0,20,1135	0/0:23,0:23:69.22:0,69,851	./.	1/1:2,1:1:3.01:43,3,0	0/0:24,0:24:72.21:0,72,879	0/0:27,0:27:81.24:0,81,985	0/0:18,0:18:45.14:0,45,558	0/0:29,0:29:84.26:0,84,1041	0/1:57,37:81:99:1030,0,1002	0/1:62,46:80:99:383,0,1464	0/0:18,0:18:54.16:0,54,657	0/0:22,0:22:63.18:0,63,768	0/0:46,0:46:99:0,135,1643	0/0:39,0:39:99:0,107,1286	1/1:1,1:1:3.01:43,3,0	./.	0/0:245,5:246:99:0,658,8554	0/0:48,16:43:8.19:0,8,909	0/0:21,0:20:54.17:0,54,669	0/0:31,0:31:90.27:0,90,1102	0/1:46,16:44:23.94:24,0,1060	0/1:111,38:120:99:364,0,3233	1/1:2,11:2:3.01:43,3,0	0/1:18,4:21:31.99:32,0,541
chr10	83487149	.	T	TC	14460.19	PASS	AB=0.679;AC=18;AF=0.333;AN=54;BaseQRankSum=23.781;DP=1568;DS;FS=4.074;HRun=0;HaplotypeScore=266.2542;InbreedingCoeff=0.3262;MQ=53.00;MQ0=38;MQRankSum=-22.547;QD=12.01;ReadPosRankSum=0.681;VQSLOD=5.0330;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:20:45.15:673,45,0	0/0:13,0:13:39.13:0,39,545	0/0:30,0:26:78.22:0,78,1026	0/0:33,0:31:81.24:0,81,1078	0/1:51,77:109:99:1994,0,1402	0/0:14,0:14:39.13:0,39,544	1/1:0,21:10:27.09:395,27,0	1/1:1,17:7:12.01:159,12,0	0/0:29,0:29:81.26:0,81,1117	0/0:25,0:25:72.24:0,72,1007	0/0:30,0:30:84.26:0,84,1142	0/0:27,0:27:75.25:0,75,1049	0/1:52,65:100:99:1407,0,1635	0/1:63,97:131:99:2464,0,1848	0/0:28,0:28:81.26:0,81,1116	0/0:26,0:26:78.26:0,78,1091	0/0:31,0:31:93.31:0,93,1301	0/0:18,0:18:54.16:0,54,737	1/1:0,9:7:21:286,21,0	1/1:0,15:13:33.11:485,33,0	0/1:173,69:231:99:1716,0,5694	0/1:56,71:121:99:2016,0,1781	0/0:19,0:19:54.18:0,54,743	0/0:30,0:30:84.22:0,84,1120	0/1:50,70:102:99:1574,0,1697	0/1:124,48:156:99:898,0,4403	./.	0/1:27,15:42:99:392,0,1014
chr10	83487734	.	C	CA	5996.35	PASS	AC=16;AF=0.364;AN=44;BaseQRankSum=10.507;DP=683;FS=34.684;HRun=2;HaplotypeScore=77.9588;InbreedingCoeff=0.9743;MQ=57.86;MQ0=70;MQRankSum=-9.144;QD=18.51;ReadPosRankSum=1.534;VQSLOD=3.1374;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:11,0:11:33.11:0,33,460	0/0:21,0:17:13.52:0,14,511	0/0:16,0:12:35.56:0,36,432	1/1:3,37:18:18.06:287,18,0	0/0:30,0:29:84.27:0,84,1157	./.	./.	0/0:28,0:28:84.24:0,84,1121	0/0:27,0:27:81.24:0,81,1112	0/0:24,0:24:63.21:0,63,881	0/0:35,0:35:99:0,105,1451	1/1:4,49:29:60.20:945,60,0	1/1:2,28:13:30:476,30,0	0/0:27,0:27:81.26:0,81,1116	0/0:24,0:24:72.24:0,72,1006	0/0:16,0:16:48.13:0,48,651	0/0:16,0:15:45.15:0,45,629	./.	./.	1/1:3,64:60:99:2342,148,0	1/1:5,33:14:33.11:512,33,0	0/0:20,0:20:44.93:0,45,629	0/0:46,0:46:99:0,135,1869	1/1:1,28:15:36.12:575,36,0	1/1:5,57:20:48.16:764,48,0	./.	1/1:1,4:2:6.02:96,6,0
chr10	83487944	.	AAG	A	6088.34	PASS	AB=0.808;AC=17;AF=0.304;AN=56;BaseQRankSum=15.172;DP=1079;FS=0.564;HRun=0;HaplotypeScore=187.6753;InbreedingCoeff=0.1437;MQ=46.35;MQ0=120;MQRankSum=-13.948;QD=7.90;ReadPosRankSum=0.565;VQSLOD=4.6285;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,19:36:1.02:602,0,1	0/0:11,0:10:30.10:0,30,528	0/0:12,0:10:29.92:0,30,415	0/0:16,0:11:22.98:0,23,303	0/1:87,12:63:99:580,0,160	0/0:31,0:31:90.21:0,90,1466	1/1:8,8:13:7.38:339,7,0	1/1:33,12:22:17.25:405,17,0	0/0:21,0:21:63.09:0,63,1003	0/0:21,0:21:63.20:0,63,1061	0/0:29,0:29:81.12:0,81,1358	0/0:23,0:23:67.43:0,67,1071	0/1:51,10:40:83.12:264,0,83	0/1:48,8:33:5.66:426,0,6	0/0:28,0:28:84.26:0,84,1425	0/0:28,0:28:81.26:0,81,1389	0/0:19,0:19:51.17:0,51,899	0/0:13,0:13:39.13:0,39,675	0/1:13,5:14:0.52:205,0,1	0/1:16,12:19:24.10:239,0,24	0/1:62,17:69:99:619,0,1354	0/1:64,17:57:99:747,0,145	0/0:27,0:27:81.22:0,81,1302	0/0:29,0:29:81.23:0,81,1395	1/1:77,8:47:3.19:466,3,0	0/1:82,15:73:99:576,0,992	0/1:22,15:28:16.46:441,0,16	0/1:21,4:21:99:179,0,213
chr10	83487945	.	AG	A	8614.48	PASS	AB=0.736;AC=22;AF=0.393;AN=56;BaseQRankSum=17.229;DP=1068;FS=7.493;HRun=1;HaplotypeScore=162.4567;InbreedingCoeff=0.5454;MQ=46.39;MQ0=119;MQRankSum=-13.871;QD=11.31;ReadPosRankSum=0.822;VQSLOD=2.8903;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:43,0:36:61.09:387,61,0	0/0:11,0:10:30.10:0,30,418	0/0:12,0:10:29.77:0,30,332	0/0:16,0:11:23.05:0,23,250	0/1:64,36:62:95.54:1153,0,96	0/0:32,0:32:93.12:0,93,1178	1/1:15,0:12:23.87:177,24,0	1/1:43,1:21:47.99:294,48,0	0/0:21,0:21:63.07:0,63,799	0/0:21,0:21:63.19:0,63,852	0/0:28,0:28:77.37:0,77,1069	0/0:23,0:23:67.41:0,67,856	0/1:30,31:40:39.62:791,0,40	1/1:34,22:33:14.69:790,15,0	0/0:29,0:29:87.25:0,87,1163	0/0:28,0:28:81.08:0,81,1095	0/0:18,0:18:51.17:0,51,711	0/0:13,0:13:39.11:0,39,525	1/1:17,0:14:20.23:127,20,0	1/1:28,0:19:18.78:121,19,0	0/1:75,4:69:99:368,0,989	0/1:50,30:57:78:1055,0,78	0/0:27,0:27:81.20:0,81,1043	0/0:27,0:27:81.24:0,81,1107	1/1:43,41:46:53.01:1295,53,0	0/1:57,38:72:99:1317,0,710	1/1:35,0:26:44.76:278,45,0	0/1:10,15:21:99:461,0,152
chr10	83488145	.	A	AC	8493.30	PASS	AB=0.551;AC=26;AF=0.464;AN=56;BaseQRankSum=7.976;DP=887;FS=17.969;HRun=0;HaplotypeScore=98.9148;InbreedingCoeff=0.8361;MQ=50.69;MQ0=56;MQRankSum=-9.611;QD=15.61;ReadPosRankSum=-1.550;VQSLOD=5.0766;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:31:68.99:977,69,0	0/0:13,0:13:36.12:0,36,503	0/0:28,0:10:26.52:0,27,298	0/0:19,0:9:26.07:0,26,301	1/1:9,7:28:42.01:406,42,0	0/0:26,0:26:78.25:0,78,1074	1/1:2,10:14:27.02:362,27,0	1/1:1,8:8:21.06:296,21,0	0/0:25,0:25:72.24:0,72,1002	0/0:21,0:21:63.20:0,63,854	0/0:23,0:23:66.22:0,66,916	0/0:26,0:26:78.24:0,78,1054	1/1:11,12:20:30.02:332,30,0	1/1:10,19:41:27.08:619,27,0	0/0:27,0:27:81.26:0,81,1118	0/0:29,0:29:81.27:0,81,1133	0/0:26,0:26:75.24:0,75,1032	0/0:28,0:28:81.24:0,81,1113	1/1:1,10:11:27.09:431,27,0	1/1:0,8:4:6.02:95,6,0	1/1:7,82:83:99:2739,178,0	1/1:11,6:31:15.09:428,15,0	0/0:20,0:20:60.16:0,60,801	0/0:32,0:32:96.32:0,96,1341	0/1:7,7:26:29.76:359,0,30	0/1:13,12:40:99:664,0,147	1/1:5,14:19:50.91:601,51,0	1/1:2,2:8:15.04:183,15,0
chr10	83488341	.	CAGCAGGGGG	C	713.13	PASS	AB=0.833;AC=7;AF=0.175;AN=40;BaseQRankSum=4.788;DP=463;FS=15.039;HRun=0;HaplotypeScore=129.5617;InbreedingCoeff=0.6756;MQ=74.59;MQ0=21;MQRankSum=-4.974;QD=20.38;ReadPosRankSum=0.136;VQSLOD=2.2707;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:1:3.01:95,3,0	0/0:12,0:12:36.12:0,36,1546	0/0:21,0:20:60.21:0,60,2698	0/0:26,0:26:78.27:0,78,3291	./.	0/0:21,0:21:61.08:0,61,2776	./.	1/1:2,6:5:12.04:379,12,0	0/0:33,0:33:99:0,99,4780	0/0:25,0:25:72.25:0,72,3403	0/0:12,0:11:30.10:0,30,1312	0/0:23,0:23:63.22:0,63,3033	./.	./.	0/0:22,0:22:63.22:0,63,3026	0/0:28,0:28:78.25:0,78,3733	0/0:26,0:26:75.23:0,75,3479	0/0:28,0:28:81.28:0,81,3838	./.	./.	0/0:24,1:21:41.98:0,42,1957	./.	0/0:21,0:21:60.21:0,60,2804	0/0:45,0:45:99:0,132,6233	1/1:3,7:5:9.03:279,9,0	0/1:12,3:4:82.70:83,0,306	./.	0/0:2,0:1:3.01:0,3,149
chr10	83488377	.	T	TC	2471.09	PASS	AB=0.612;AC=21;AF=0.420;AN=50;BaseQRankSum=11.599;DP=557;FS=17.769;HRun=1;HaplotypeScore=64.9528;InbreedingCoeff=0.7661;MQ=68.90;MQ0=18;MQRankSum=-9.959;QD=12.67;ReadPosRankSum=-0.262;VQSLOD=0.8564;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:1:3.01:48,3,0	0/0:12,0:12:36.12:0,36,503	0/0:25,0:16:48.13:0,48,623	0/0:25,0:21:63.17:0,63,838	1/1:2,16:12:9.03:140,9,0	0/0:14,0:14:39.13:0,39,545	./.	1/1:1,3:1:3.01:48,3,0	0/0:33,0:33:99:0,99,1367	0/0:26,0:26:78.18:0,78,1026	0/0:21,0:20:54.16:0,54,721	0/0:21,0:21:51.17:0,51,713	1/1:0,17:4:9.03:140,9,0	1/1:1,22:4:6.02:96,6,0	0/0:30,0:30:78.26:0,78,1089	0/0:27,0:27:69.23:0,69,965	0/0:27,0:27:78.26:0,78,1097	0/0:29,0:29:84.25:0,84,1144	./.	./.	1/1:4,25:26:60.20:958,60,0	1/1:5,21:14:21.07:334,21,0	0/0:17,0:17:45.15:0,45,628	0/0:41,0:41:99:0,123,1720	1/1:3,27:17:24.08:381,24,0	0/1:11,19:18:86.79:415,0,87	1/1:1,10:1:3.01:48,3,0	1/1:0,5:4:3.01:48,3,0
chr10	83488946	.	ACC	A	214.86	PASS	AB=0.898;AC=6;AF=0.130;AN=46;BaseQRankSum=8.577;DP=1169;DS;FS=0.659;HRun=3;HaplotypeScore=220.0907;InbreedingCoeff=0.0821;MQ=45.12;MQ0=76;MQRankSum=-6.573;QD=0.48;ReadPosRankSum=-0.157;VQSLOD=-0.6013;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,2:5:2.22:7,2,0	0/0:15,0:15:36.11:0,36,695	0/0:35,0:10:25.89:0,26,432	0/0:26,0:8:21.06:0,21,374	0/0:70,2:51:5.15:0,5,1546	0/0:27,0:27:78.27:0,78,1499	./.	./.	0/0:29,0:29:84.23:0,84,1462	0/0:32,0:32:93.31:0,93,1749	0/0:15,0:15:30.10:0,30,579	0/0:34,0:34:99:0,102,1968	0/0:79,1:64:99:0,113,2153	0/1:74,8:63:10.99:11,0,1997	0/0:38,0:38:99:0,111,2113	0/0:34,0:34:99:0,102,1932	0/0:34,0:34:99:0,99,1846	0/0:20,0:20:60.21:0,60,1150	./.	./.	0/1:208,25:213:99:136,0,8028	0/1:69,6:55:99:108,0,1663	0/0:19,0:19:54.14:0,54,1004	0/0:25,0:25:75.25:0,75,1413	0/0:76,2:53:62.98:0,63,1881	0/0:84,6:63:12.65:0,13,2589	./.	0/1:39,4:33:62.37:62,0,1091
chr10	83488951	.	CTTCTCG	C	91.75	PASS	AB=0.944;AC=4;AF=0.080;AN=50;BaseQRankSum=6.297;DP=1171;DS;FS=37.818;HRun=0;HaplotypeScore=268.4464;InbreedingCoeff=0.2673;MQ=44.67;MQ0=77;MQRankSum=-5.675;QD=0.71;ReadPosRankSum=0.256;VQSLOD=1.5669;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:3.01:55,3,0	0/0:13,0:13:36.02:0,36,1350	0/0:36,0:9:20.43:0,20,861	0/0:28,0:11:33.11:0,33,1048	0/0:74,3:49:44.41:0,44,3246	0/0:26,0:26:78.27:0,78,2879	./.	0/0:2,0:2:6.02:0,6,222	0/0:26,0:26:78.27:0,78,2804	0/0:30,0:30:87.30:0,87,3232	0/0:16,0:16:33.11:0,33,1221	0/0:35,0:35:99:0,105,3794	0/0:79,0:60:71.12:0,71,4088	0/0:80,0:61:99:0,123,3807	0/0:37,0:37:99:0,111,3997	0/0:34,0:34:99:0,102,3629	0/0:34,0:34:99:0,102,3676	0/0:20,0:20:60.21:0,60,2180	0/0:3,0:3:6.02:0,6,198	./.	0/0:236,0:216:99:0,529,18068	0/1:77,4:55:35.22:35,0,3468	0/0:21,0:21:60.21:0,60,2211	0/0:28,0:28:84.29:0,84,3142	0/0:81,3:51:43.08:0,43,3594	0/0:91,1:65:99:0,107,5701	./.	0/1:40,3:32:99:103,0,2227
chr10	83489118	.	C	CACA	1655.34	PASS	AB=0.824;AC=11;AF=0.220;AN=50;BaseQRankSum=9.313;DP=887;FS=6.376;HRun=0;HaplotypeScore=171.3858;InbreedingCoeff=0.2970;MQ=65.39;MQ0=5;MQRankSum=-9.276;QD=6.02;ReadPosRankSum=1.358;VQSLOD=2.4418;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,1:4:6.02:120,6,0	0/0:19,0:19:51.11:0,51,747	0/0:37,0:37:99:0,102,1578	0/0:29,0:29:75.18:0,75,1148	0/1:33,7:36:99:137,0,819	0/0:27,0:26:78.24:0,78,1249	./.	1/1:6,0:3:5.99:78,6,0	0/0:28,0:28:81.23:0,81,1272	0/0:32,0:32:96.31:0,96,1555	0/0:19,0:19:45.01:0,45,659	0/0:30,0:30:90.30:0,90,1474	0/1:49,10:49:99:577,0,1222	0/1:41,11:45:99:491,0,1334	0/0:26,0:26:78.24:0,78,1242	0/0:45,0:45:99:0,129,2093	0/0:30,0:30:81.21:0,81,1267	0/0:19,0:18:54.16:0,54,872	1/1:2,1:1:3.01:65,3,0	./.	0/0:148,1:150:99:0,329,6221	0/1:29,7:30:99:207,0,726	0/0:18,0:18:42.07:0,42,640	0/0:35,0:34:99:0,102,1674	0/0:27,0:26:57.19:0,57,947	0/1:44,2:33:99:124,0,984	./.	0/0:20,0:18:36.12:0,36,599
chr10	83489183	.	T	TG	2006.65	PASS	AB=0.850;AC=9;AF=0.167;AN=54;BaseQRankSum=11.448;DP=1377;DS;FS=32.357;HRun=0;HaplotypeScore=134.9207;InbreedingCoeff=-0.0030;MQ=40.68;MQ0=214;MQRankSum=-9.626;QD=2.70;ReadPosRankSum=-0.967;VQSLOD=1.4026;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:39,2:14:63.18:63,0,305	0/0:15,0:15:39.13:0,39,545	0/0:36,0:1:3.01:0,3,42	./.	0/1:79,23:62:99:167,0,723	0/0:19,0:17:45.15:0,45,628	1/1:18,4:17:9.03:142,9,0	0/0:29,0:9:24.08:0,24,335	0/0:37,0:37:99:0,108,1493	0/0:37,0:35:99:0,102,1426	0/0:20,0:20:39.11:0,39,545	0/0:24,0:24:72.24:0,72,1006	0/0:63,8:43:58.57:0,59,1375	0/0:65,6:42:0.68:0,1,1163	0/0:40,0:40:99:0,120,1659	0/0:32,0:32:96.31:0,96,1325	0/0:26,0:26:72.24:0,72,1006	0/0:19,0:18:57.19:0,57,797	0/0:33,0:8:21.07:0,21,293	0/0:22,0:9:9.03:0,9,126	0/1:217,33:213:99:592,0,5509	0/1:76,18:59:99:480,0,701	0/0:26,0:26:51.17:0,51,712	0/0:38,0:37:99:0,108,1490	0/1:64,24:53:99:337,0,829	0/1:102,12:67:72.75:73,0,1930	0/0:10,0:5:12.04:0,12,167	0/1:23,10:23:99:293,0,251
chr10	83489228	.	G	GT	4294.34	PASS	AB=0.891;AC=15;AF=0.268;AN=56;BaseQRankSum=20.017;DP=1424;DS;FS=13.254;HRun=1;HaplotypeScore=191.3954;InbreedingCoeff=0.0434;MQ=43.60;MQ0=172;MQRankSum=-17.739;QD=4.17;ReadPosRankSum=0.207;VQSLOD=0.0281;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:52,0:24:0.22:46,0,0	0/0:14,0:14:35.78:0,36,431	0/0:29,0:3:6.01:0,6,60	0/0:19,0:6:18.06:0,18,230	0/1:85,7:66:99:192,0,606	0/0:22,0:22:60.18:0,60,763	0/1:15,0:10:2.38:2,0,33	0/0:10,0:3:5.99:0,6,48	0/0:36,0:36:99:0,105,1295	0/0:29,0:29:75.17:0,75,893	0/0:14,0:14:30.07:0,30,374	0/0:28,0:28:84.21:0,84,1021	0/1:90,15:64:99:471,0,809	0/1:83,16:67:99:414,0,970	0/0:37,0:37:99:0,102,1264	0/0:38,0:38:99:0,114,1422	0/0:31,0:31:87.21:0,87,1067	0/0:16,0:16:45.15:0,45,583	0/0:14,0:7:8.94:0,9,91	1/1:18,0:9:0.67:7,1,0	0/1:214,28:200:99:701,0,3484	0/1:88,9:69:99:382,0,419	0/0:25,0:25:57.14:0,57,704	0/0:32,0:32:93.29:0,93,1190	0/1:105,8:80:99:598,0,424	0/1:88,34:82:99:1117,0,742	1/1:21,0:12:23.59:81,24,0	0/1:42,11:38:99:283,0,229
chr10	83489229	.	T	TG	5641.17	PASS	AB=0.804;AC=16;AF=0.296;AN=54;BaseQRankSum=21.969;DP=1419;DS;FS=4.424;HRun=6;HaplotypeScore=182.5923;InbreedingCoeff=0.2034;MQ=43.58;MQ0=180;MQRankSum=-19.957;QD=5.50;ReadPosRankSum=-2.154;VQSLOD=0.4558;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:53,0:24:35.89:300,36,0	0/0:13,0:13:33.07:0,33,331	0/0:29,0:3:6:0,6,56	0/0:19,0:6:18:0,18,167	0/1:74,9:65:99:342,0,415	0/0:22,0:22:57.11:0,57,575	0/0:15,0:10:3.01:0,3,31	./.	0/0:36,0:36:98.79:0,99,1001	0/0:29,0:29:69.11:0,69,680	0/0:12,0:12:27.04:0,27,274	0/0:28,0:28:72.15:0,72,734	0/1:69,28:63:99:721,0,566	0/1:72,21:66:99:646,0,688	0/0:34,0:34:93.20:0,93,948	0/0:40,0:40:99:0,108,1091	0/0:31,0:31:78.17:0,78,795	0/0:17,0:17:45.10:0,45,459	1/1:14,0:7:3:25,3,0	1/1:18,0:9:8.89:62,9,0	0/1:221,8:201:99:830,0,2393	0/1:64,18:67:99:594,0,278	0/0:26,0:26:57.07:0,57,563	0/0:32,0:32:90.21:0,90,918	0/1:61,31:79:99:911,0,243	0/1:103,0:79:99:647,0,485	1/1:21,0:12:30:263,30,0	0/1:40,0:35:99:300,0,145
chr10	83489232	.	G	GA	904.41	PASS	AB=0.971;AC=11;AF=0.204;AN=54;BaseQRankSum=17.515;DP=1384;DS;FS=1.417;HRun=0;HaplotypeScore=197.0436;InbreedingCoeff=0.1058;MQ=44.75;MQ0=182;MQRankSum=-17.296;QD=1.30;ReadPosRankSum=3.226;VQSLOD=2.7317;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:53,0:25:0.80:48,0,1	0/0:12,0:12:33.11:0,33,460	0/0:26,0:5:3.40:0,3,79	0/0:20,0:6:18.06:0,18,247	0/1:78,7:63:99:112,0,695	0/0:23,0:23:60.17:0,60,817	0/0:15,0:8:3.01:0,3,42	./.	0/0:35,0:35:99:0,105,1428	0/0:28,0:28:81.21:0,81,1063	0/0:12,0:12:30.07:0,30,403	0/0:28,0:28:84.24:0,84,1111	0/1:103,0:62:99:187,0,909	0/1:98,0:66:99:195,0,1095	0/0:34,0:34:99:0,102,1362	0/0:39,0:39:99:0,117,1586	0/0:30,0:30:87.25:0,87,1163	0/0:16,0:16:48.15:0,48,655	0/0:13,0:6:2.93:0,3,38	1/1:15,0:8:0.45:5,0,0	0/0:243,0:196:99:0,212,4141	0/1:86,2:65:99:171,0,493	0/0:25,0:25:60.17:0,60,811	0/0:31,0:31:90.30:0,90,1258	0/1:108,3:76:99:277,0,535	0/1:112,0:74:3.23:3,0,1061	1/1:21,0:12:4.25:41,4,0	0/0:50,0:34:15.12:0,15,315
chr10	83489233	.	G	GA	1803.74	PASS	AB=0.935;AC=16;AF=0.296;AN=54;BaseQRankSum=18.500;DP=1375;DS;FS=0.302;HRun=0;HaplotypeScore=191.9606;InbreedingCoeff=0.0003;MQ=44.90;MQ0=184;MQRankSum=-18.142;QD=1.78;ReadPosRankSum=2.144;VQSLOD=2.8419;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:42,12:25:4.73:160,5,0	0/0:13,0:13:33.11:0,33,455	0/1:26,0:5:19.60:20,0,73	0/0:22,0:6:18.06:0,18,243	0/1:81,0:58:98.85:99,0,671	0/0:23,0:23:63.11:0,63,830	0/0:15,0:8:3.01:0,3,42	./.	0/0:36,0:36:99:0,102,1403	0/0:27,0:27:74.61:0,75,998	0/0:12,0:12:30.07:0,30,403	0/0:28,0:28:84.24:0,84,1111	0/1:94,3:62:99:203,0,887	0/1:84,10:66:99:324,0,1067	0/0:35,0:35:99:0,102,1378	0/0:39,0:39:99:0,117,1587	0/0:30,0:30:87.24:0,87,1163	0/0:16,0:16:48.15:0,48,656	0/1:12,0:5:15.10:15,0,15	1/1:13,2:8:2.20:45,2,0	0/1:218,23:193:99:424,0,3805	0/1:81,2:63:99:234,0,444	0/0:25,0:25:60.19:0,60,816	0/0:32,0:32:90.30:0,90,1258	0/1:106,3:76:99:235,0,502	0/1:102,7:72:84.94:85,0,970	1/1:18,3:12:7.22:83,7,0	0/1:42,8:34:36.79:37,0,286
chr10	83489234	.	G	GA	5901.54	PASS	AB=0.922;AC=16;AF=0.296;AN=54;BaseQRankSum=20.541;DP=1355;DS;FS=7.946;HRun=0;HaplotypeScore=174.7846;InbreedingCoeff=0.2069;MQ=44.95;MQ0=190;MQRankSum=-18.941;QD=6.07;ReadPosRankSum=2.950;VQSLOD=4.2965;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,36:25:31.60:412,32,0	0/0:13,0:13:36.10:0,36,475	0/0:26,0:5:8.33:0,8,101	0/0:21,0:6:18.06:0,18,241	0/1:74,6:56:99:248,0,645	0/0:22,0:22:63.15:0,63,827	0/0:4,11:8:3.01:0,3,42	./.	0/0:35,0:35:99:0,105,1422	0/0:25,0:25:75.19:0,75,1001	0/0:12,0:12:30.07:0,30,398	0/0:28,0:28:84.24:0,84,1109	0/1:91,12:62:99:596,0,854	0/1:99,1:64:99:401,0,1034	0/0:36,0:36:99:0,102,1376	0/0:39,0:39:99:0,117,1583	0/0:30,0:30:83.86:0,84,1125	0/0:16,0:16:48.15:0,48,655	1/1:3,7:4:3.01:46,3,0	1/1:4,10:7:8.51:79,9,0	0/1:212,26:190:99:1061,0,3743	0/1:80,4:61:99:508,0,443	0/0:25,0:25:66.16:0,66,858	0/0:32,0:32:93.30:0,93,1283	0/1:101,8:73:99:695,0,407	0/1:98,8:70:99:899,0,822	1/1:7,13:12:32.42:436,32,0	0/1:42,9:33:99:520,0,249
chr10	83489720	.	CAT	C	317.61	PASS	AB=0.826;AC=5;AF=0.104;AN=48;BaseQRankSum=4.835;DP=812;FS=1.073;HRun=0;HaplotypeScore=95.8325;InbreedingCoeff=0.1400;MQ=46.04;MQ0=112;MQRankSum=-4.733;QD=2.81;ReadPosRankSum=2.698;VQSLOD=1.7242;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:10,0:10:18.06:0,18,343	0/0:25,1:6:18.03:0,18,301	0/0:19,0:2:6.02:0,6,106	0/0:41,0:30:21.04:0,21,386	0/0:16,0:16:17.98:0,18,322	./.	./.	0/0:29,0:29:42.14:0,42,853	0/0:42,0:36:99:0,99,1929	0/0:20,0:18:9.03:0,9,182	0/0:33,0:33:35.38:0,35,648	0/0:58,2:46:8.16:0,8,996	0/1:49,6:46:99:135,0,791	0/0:24,0:24:27.09:0,27,525	0/0:31,0:31:33.11:0,33,670	0/0:22,0:20:15.05:0,15,305	0/0:25,0:24:18.53:0,19,367	0/0:3,0:1:3.01:0,3,61	./.	0/0:143,0:119:99:0,178,3474	0/0:38,0:31:27.09:0,27,498	0/0:15,0:14:21.03:0,21,385	0/0:31,0:26:21.07:0,21,403	0/0:55,2:29:30.10:0,30,584	0/1:36,12:28:99:199,0,910	1/1:2,1:1:3.01:49,3,0	0/1:5,2:3:39.80:43,0,40
chr10	83494016	.	CCCCGTTAATTAACTG	C	921.03	PASS	AB=0.748;AC=3;AF=0.083;AN=36;BaseQRankSum=4.600;DP=399;FS=12.926;HRun=0;HaplotypeScore=101.1159;InbreedingCoeff=-0.1025;MQ=28.27;MQ0=167;MQRankSum=-3.577;QD=16.45;ReadPosRankSum=1.993;VQSLOD=1.1504;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:5,0:3:9.03:0,9,548	./.	./.	0/1:14,5:12:99:487,0,815	0/0:25,0:17:45.15:0,45,3007	./.	./.	0/0:17,0:10:21.03:0,21,1252	0/0:21,0:7:20.99:0,21,1149	0/0:25,0:10:9.03:0,9,641	0/0:11,0:8:21.07:0,21,1517	0/1:11,8:12:99:395,0,1035	0/1:12,6:6:99:133,0,221	0/0:21,0:14:30.10:0,30,2139	0/0:18,0:11:30.10:0,30,2096	0/0:23,0:16:36.12:0,36,2236	0/0:19,0:15:39.13:0,39,2888	./.	./.	0/0:40,0:25:62.64:0,63,4456	0/0:13,0:5:15.05:0,15,1014	./.	0/0:19,0:15:30.10:0,30,2034	0/0:19,0:6:12.04:0,12,862	0/0:23,6:8:21.07:0,21,1499	./.	./.
chr10	83497413	.	TA	T	130.73	PASS	AB=0.929;AC=6;AF=0.111;AN=54;BaseQRankSum=12.858;DP=1017;FS=2.200;HRun=5;HaplotypeScore=178.6293;InbreedingCoeff=0.1729;MQ=43.00;MQ0=103;MQRankSum=-11.760;QD=0.31;ReadPosRankSum=1.829;VQSLOD=-0.3666;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:8:6.03:0,6,61	0/0:11,0:11:26.89:0,27,368	0/0:17,0:10:30.10:0,30,408	0/0:21,0:16:45.11:0,45,550	0/0:99,0:46:39.50:0,40,609	0/0:25,0:25:66.16:0,66,874	0/0:6,0:5:7.29:0,7,44	./.	0/0:24,0:24:72.07:0,72,885	0/0:37,0:37:99:0,108,1477	0/0:32,0:32:90.26:0,90,1208	0/0:25,0:25:63.20:0,63,844	0/1:105,11:73:99:152,0,877	0/1:77,9:54:18.70:19,0,856	0/0:35,0:35:96.30:0,96,1291	0/0:24,0:24:72.22:0,72,949	0/0:19,0:19:48.04:0,48,653	0/0:18,0:18:54.04:0,54,705	0/0:6,0:5:0.47:0,0,1	1/1:13,0:5:4.36:10,4,0	0/0:27,0:23:60.16:0,60,795	0/1:86,2:44:8.45:8,0,605	0/0:27,0:27:78.24:0,78,1045	0/0:17,0:17:48.16:0,48,655	0/0:73,0:35:27.45:0,27,393	0/1:103,10:73:53.11:53,0,1813	0/0:19,0:12:5.77:0,6,58	0/0:26,0:23:45.58:0,46,652
chr10	83497415	.	A	AAAT	279.49	PASS	AB=0.815;AC=4;AF=0.074;AN=54;BaseQRankSum=6.932;DP=1012;FS=14.245;HRun=0;HaplotypeScore=211.4426;InbreedingCoeff=0.0173;MQ=43.14;MQ0=102;MQRankSum=-7.043;QD=5.82;ReadPosRankSum=-3.899;VQSLOD=0.9805;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,2:8:77.75:109,0,78	0/0:10,0:10:27.08:0,27,457	0/0:17,0:10:30.10:0,30,509	0/0:19,0:16:45.11:0,45,692	0/0:98,0:44:62.58:0,63,900	0/0:25,0:25:69.22:0,69,1142	0/1:3,3:5:56.49:188,0,56	./.	0/0:24,0:24:72.12:0,72,1121	0/0:37,0:37:99:0,108,1826	0/0:33,0:33:93.31:0,93,1543	0/0:24,0:24:63.20:0,63,1041	0/0:117,0:74:99:0,129,1755	0/0:87,0:55:66.69:0,67,1394	0/0:35,0:35:96.31:0,96,1604	0/0:27,0:27:81.17:0,81,1236	0/0:19,0:19:48.64:0,49,809	0/0:19,0:19:57.14:0,57,911	0/0:4,0:3:0.47:0,0,1	0/1:11,3:6:18.47:18,0,39	0/0:26,0:22:60.16:0,60,972	0/0:88,0:44:70.16:0,70,1053	0/0:28,0:28:81.25:0,81,1321	0/0:16,0:16:48.16:0,48,817	0/0:69,0:32:4.75:0,5,572	0/0:113,0:73:99:0,127,2662	0/1:18,1:12:71.82:72,0,105	0/0:26,0:23:50.70:0,51,842
chr10	83497417	.	AAG	A	2345.14	PASS	AB=0.864;AC=14;AF=0.259;AN=54;BaseQRankSum=15.725;DP=991;FS=4.178;HRun=0;HaplotypeScore=189.6240;InbreedingCoeff=0.0281;MQ=44.83;MQ0=103;MQRankSum=-15.301;QD=3.70;ReadPosRankSum=-3.158;VQSLOD=1.9097;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,1:8:31.10:31,0,43	0/0:9,0:9:27.09:0,27,465	0/0:15,0:11:30.10:0,30,511	0/0:20,0:18:46.14:0,46,747	0/1:78,17:43:99:137,0,745	0/0:26,0:26:72.16:0,72,1193	0/1:5,1:5:6.96:41,0,7	./.	0/0:25,0:25:75.21:0,75,1191	0/0:38,0:38:99:0,114,1913	0/0:32,0:32:93.26:0,93,1539	0/0:22,0:22:60.19:0,60,1029	0/1:99,14:70:99:813,0,997	0/1:75,8:53:99:337,0,1027	0/0:33,0:33:96.32:0,96,1683	0/0:28,0:28:81.22:0,81,1293	0/0:19,0:19:48.12:0,48,813	0/0:19,0:19:57.11:0,57,928	1/1:3,0:2:5.98:47,6,0	1/1:6,7:5:14.96:174,15,0	0/0:26,0:22:57.19:0,57,1003	0/1:72,14:43:99:391,0,720	0/0:27,0:27:78.23:0,78,1307	0/0:16,0:16:48.15:0,48,816	0/1:57,10:29:99:149,0,440	0/1:104,10:76:99:287,0,2214	0/1:14,5:12:19.30:70,0,19	0/1:19,7:23:29.66:30,0,788
chr10	83497419	.	GA	G	343.70	PASS	AB=0.920;AC=7;AF=0.135;AN=52;BaseQRankSum=13.195;DP=987;FS=2.117;HRun=5;HaplotypeScore=185.3714;InbreedingCoeff=0.0772;MQ=44.79;MQ0=107;MQRankSum=-12.357;QD=0.72;ReadPosRankSum=0.613;VQSLOD=-0.5184;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:7:12.43:0,12,108	0/0:9,0:9:24.07:0,24,314	0/0:15,0:11:29.92:0,30,369	0/0:20,0:18:38.90:0,39,617	0/0:94,0:43:37:0,37,576	0/0:24,0:24:69.22:0,69,926	0/0:7,0:5:9.23:0,9,61	./.	0/0:24,0:24:69.22:0,69,926	0/0:39,0:39:99:0,108,1462	0/0:31,0:31:84.28:0,84,1148	0/0:20,0:20:57.19:0,57,780	0/1:102,11:69:99:216,0,815	0/1:70,10:51:75.63:76,0,743	0/0:33,0:33:99:0,99,1319	0/0:26,0:26:75.25:0,75,1016	0/0:19,0:19:45.02:0,45,614	0/0:19,0:19:51.17:0,51,688	./.	1/1:15,0:5:4.35:10,4,0	0/0:27,0:23:60.17:0,60,800	0/1:78,2:42:20.09:20,0,588	0/0:28,0:28:78.24:0,78,1035	0/0:17,0:17:48.16:0,48,656	0/1:67,2:30:30.69:31,0,360	0/1:103,11:75:99:114,0,1979	0/0:19,0:12:9.67:0,10,87	0/0:27,0:24:49.10:0,49,693
chr10	83497431	.	C	CT	3898.53	PASS	AB=0.686;AC=14;AF=0.269;AN=52;BaseQRankSum=16.187;DP=1022;FS=0.000;HRun=1;HaplotypeScore=180.5104;InbreedingCoeff=0.3749;MQ=45.64;MQ0=104;MQRankSum=-15.511;QD=6.17;ReadPosRankSum=-2.083;VQSLOD=-0.3917;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,2:5:6.02:76,6,0	0/0:10,0:10:30.08:0,30,375	0/0:24,0:18:48.03:0,48,531	0/0:25,0:20:53.28:0,53,702	0/1:58,35:41:82.84:83,0,491	0/0:24,0:24:66.21:0,66,857	1/1:1,5:7:18.01:201,18,0	./.	0/0:24,0:24:72.23:0,72,934	0/0:36,0:36:99:0,105,1346	0/0:29,0:29:81.26:0,81,1051	0/0:22,0:22:63.20:0,63,817	0/1:52,58:63:99:1096,0,666	0/1:37,43:46:99:502,0,635	0/0:34,0:34:99:0,99,1284	0/0:23,0:23:66.19:0,66,856	0/0:17,0:17:45.15:0,45,584	0/0:16,0:16:48.16:0,48,623	./.	1/1:0,12:6:15.05:224,15,0	0/0:29,3:28:75.24:0,75,973	0/1:51,42:50:99:660,0,478	0/0:25,0:25:72.23:0,72,934	0/0:21,0:21:63.20:0,63,817	0/1:43,29:33:99:209,0,517	0/1:77,40:80:99:691,0,1840	1/1:2,12:7:12.03:158,12,0	0/0:23,3:20:39.11:0,39,491
chr10	83497570	.	TA	T	514.97	PASS	AB=0.643;AC=11;AF=0.196;AN=56;BaseQRankSum=8.015;DP=1528;DS;FS=0.702;HRun=1;HaplotypeScore=222.4296;InbreedingCoeff=0.7504;MQ=38.17;MQ0=150;MQRankSum=-7.966;QD=9.20;ReadPosRankSum=-1.650;VQSLOD=0.6447;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,3:3:6.02:84,6,0	0/0:15,0:15:45.15:0,45,702	0/0:20,0:2:6.02:0,6,89	0/0:17,0:3:5.37:0,5,36	0/0:169,4:121:99:0,130,2363	0/0:24,0:24:72.23:0,72,1104	1/1:2,3:3:9.03:125,9,0	1/1:3,6:3:9:105,9,0	0/0:28,0:28:84.25:0,84,1263	0/0:22,0:22:66.20:0,66,977	0/0:19,0:19:51.04:0,51,738	0/0:29,0:29:84.27:0,84,1289	0/0:135,2:91:99:0,134,2515	0/0:103,0:54:99:0,109,1663	0/0:33,0:33:96.28:0,96,1431	0/0:19,0:19:57.17:0,57,842	0/0:26,0:26:75.21:0,75,1105	0/0:26,0:26:75.25:0,75,1144	1/1:3,3:2:6.02:84,6,0	0/1:12,15:11:99:148,0,116	0/0:249,0:201:99:0,367,5380	0/0:147,3:102:99:0,103,2539	0/0:20,0:20:57.19:0,57,873	0/0:25,0:25:69.17:0,69,1006	0/0:169,4:133:99:0,165,2882	0/0:117,6:79:99:0,171,2671	1/1:2,3:4:9.03:125,9,0	0/0:41,0:34:45.94:0,46,585
chr10	83498422	.	GA	G	9710.14	PASS	AB=0.763;AC=15;AF=0.268;AN=56;BaseQRankSum=11.390;DP=2108;DS;FS=1.203;HRun=3;HaplotypeScore=487.2727;InbreedingCoeff=-0.2044;MQ=51.00;MQ0=17;MQRankSum=-15.344;QD=5.66;ReadPosRankSum=-0.175;VQSLOD=1.1604;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:37,24:59:99:500,0,308	0/0:15,0:15:42.14:0,42,599	0/0:37,0:27:75.15:0,75,1016	0/0:35,0:30:83.19:0,83,1100	0/1:132,40:152:99:623,0,1690	0/0:23,0:23:63.20:0,63,889	0/1:42,31:63:99:491,0,327	0/1:36,30:44:95.41:758,0,95	0/0:28,0:28:84.28:0,84,1208	0/0:31,0:31:87.29:0,87,1238	0/0:22,0:22:60.19:0,60,844	0/0:34,0:34:96.32:0,96,1381	0/1:151,56:201:99:1141,0,2211	0/1:190,41:224:99:683,0,2841	0/0:37,0:36:99:0,111,1598	0/0:32,0:32:96.30:0,96,1347	0/0:35,0:35:99:0,102,1410	0/0:19,0:19:54.14:0,54,754	0/1:16,16:25:99:386,0,102	1/1:6,19:22:7.70:479,8,0	0/1:178,69:236:99:1180,0,3339	0/1:115,42:135:99:766,0,1424	0/0:18,0:18:48.15:0,48,672	0/0:26,0:26:78.26:0,78,1123	0/1:114,31:131:99:538,0,1750	0/1:148,64:200:99:1719,0,2114	0/1:26,15:35:99:296,0,250	0/1:35,12:43:99:150,0,352
chr10	83498630	.	T	TG	681.60	PASS	AB=0.853;AC=9;AF=0.161;AN=56;BaseQRankSum=10.495;DP=1403;FS=19.151;HRun=0;HaplotypeScore=275.5054;InbreedingCoeff=-0.2030;MQ=49.14;MQ0=28;MQRankSum=-9.125;QD=1.34;ReadPosRankSum=-0.722;VQSLOD=0.9965;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,2:17:35.83:41,0,36	0/0:14,0:14:42.14:0,42,586	0/0:32,0:18:42.33:0,42,529	0/0:28,0:14:42.07:0,42,529	0/1:109,11:110:79.26:79,0,2295	0/0:26,0:26:78.26:0,78,1090	0/0:17,3:10:12:0,12,141	0/1:25,10:27:68.75:69,0,808	0/0:35,0:35:99:0,99,1366	0/0:25,0:24:69.23:0,69,965	0/0:20,0:20:57.19:0,57,794	0/0:28,0:28:81.26:0,81,1111	0/1:115,10:112:99:140,0,2758	0/0:96,5:88:1.39:0,1,2324	0/0:37,0:37:99:0,111,1535	0/0:25,0:25:75.25:0,75,1049	0/0:41,0:40:99:0,123,1700	0/0:21,0:21:63.19:0,63,863	0/1:8,4:9:75.84:76,0,149	0/1:8,6:10:26.85:171,0,27	0/0:147,4:144:99:0,391,5429	0/1:125,5:119:19.16:19,0,2551	0/0:26,0:26:66.22:0,66,921	0/0:40,0:40:99:0,120,1660	0/0:103,5:100:95.67:0,96,2458	0/0:116,2:104:99:0,160,3461	0/1:14,4:14:99:157,0,161	0/1:27,3:30:69.29:69,0,808
chr10	83498676	.	TG	T	8827.85	PASS	AB=0.622;AC=20;AF=0.357;AN=56;BaseQRankSum=12.290;DP=1234;FS=20.543;HRun=8;HaplotypeScore=213.3600;InbreedingCoeff=0.3728;MQ=54.05;MQ0=39;MQRankSum=-11.339;QD=9.82;ReadPosRankSum=1.394;VQSLOD=1.2522;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:20:24.03:231,24,0	0/0:10,0:10:27.08:0,27,326	0/0:26,0:26:51.10:0,51,584	0/0:17,0:17:29.42:0,29,347	0/1:44,52:79:99:598,0,318	0/0:19,0:18:51.16:0,51,615	1/1:1,19:14:42.02:396,42,0	1/1:12,23:28:45.03:434,45,0	0/0:34,0:34:87.25:0,87,1039	0/0:24,0:24:51.14:0,51,595	0/0:19,0:19:39.08:0,39,453	0/0:27,0:27:72.19:0,72,837	0/1:45,54:86:99:935,0,488	0/1:45,43:75:99:813,0,576	0/0:25,0:25:63.17:0,63,747	0/0:21,0:21:54.17:0,54,652	0/0:37,0:37:96.15:0,96,1126	0/0:14,0:14:39.09:0,39,446	1/1:3,5:6:13.99:106,14,0	1/1:2,15:12:20.89:174,21,0	0/1:42,77:112:99:1394,0,729	0/1:56,69:99:99:835,0,592	0/0:19,0:19:39.05:0,39,429	0/0:42,0:42:99:0,114,1357	0/1:25,81:91:99:1110,0,344	0/1:35,60:80:99:1161,0,423	1/1:3,27:21:30.05:289,30,0	0/1:10,26:29:90.85:351,0,91
chr10	83499806	.	A	AT	237.60	PASS	AC=4;AF=0.222;AN=18;BaseQRankSum=2.929;DP=419;FS=20.577;HRun=8;HaplotypeScore=11.3133;MQ=18.64;MQ0=259;MQRankSum=-2.665;QD=5.94;ReadPosRankSum=-0.057;VQSLOD=-0.6292;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	0/0:16,0:4:3:0,3,27	./.	./.	0/0:23,0:9:3:0,3,27	0/0:25,0:10:24.01:0,24,220	./.	./.	./.	./.	0/0:21,0:12:6:0,6,55	./.	0/0:22,0:9:3:0,3,27	0/0:22,0:13:12:0,12,110	./.	./.	./.	./.	./.	0/0:28,0:14:18.01:0,18,165	./.	1/1:10,13:11:2.63:284,3,0	./.	1/1:4,9:6:3.01:35,3,0
chr10	83500814	.	GGTACACATCTGTCCTGGGTTCACC	G	906.12	PASS	AB=0.829;AC=3;AF=0.079;AN=38;BaseQRankSum=2.700;DP=654;FS=0.000;HRun=0;HaplotypeScore=80.9912;InbreedingCoeff=0.0795;MQ=14.05;MQ0=424;MQRankSum=-0.031;QD=23.85;ReadPosRankSum=2.080;VQSLOD=1.5297;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:1:0:0,0,0	./.	./.	0/0:27,0:6:3.01:0,3,205	0/0:18,0:11:21.07:0,21,2335	./.	./.	0/0:30,0:11:17.85:0,18,1761	0/0:28,0:6:18.06:0,18,1883	./.	0/0:24,0:8:11.81:0,12,1295	0/0:24,0:5:3.01:0,3,341	0/0:35,0:12:12.04:0,12,1180	0/0:30,0:9:12.04:0,12,1365	0/0:27,0:13:8.61:0,9,886	0/0:32,0:3:3.01:0,3,341	0/0:31,0:4:6.02:0,6,545	./.	./.	0/0:95,0:8:3.01:0,3,200	0/0:35,0:15:3.01:0,3,171	./.	0/0:37,0:7:6.02:0,6,649	0/0:17,0:2:3.01:0,3,237	0/1:27,7:9:99:977,0,335	1/1:4,0:1:0.47:1,0,0	0/0:9,0:3:3:0,3,26
chr10	83501128	.	C	CA	87.15	PASS	AB=0.955;AC=6;AF=0.500;AN=12;BaseQRankSum=3.022;DP=651;FS=5.798;HRun=0;HaplotypeScore=9.6002;MQ=16.58;MQ0=353;MQRankSum=3.022;QD=1.43;ReadPosRankSum=-0.553;VQSLOD=-0.0518;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/0:29,0:7:21.07:0,21,291	./.	./.	0/1:9,1:5:34.86:42,0,35	1/1:17,5:9:6.02:81,6,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:15,5:9:3.01:46,3,0	0/0:40,1:10:30.10:0,30,417	./.	0/1:9,0:3:0:0,0,0
chr10	83501997	.	T	TC	115.66	PASS	AB=0.638;AC=8;AF=0.211;AN=38;BaseQRankSum=4.070;DP=397;FS=24.502;HRun=0;HaplotypeScore=53.2877;InbreedingCoeff=0.6035;MQ=65.90;MQ0=13;MQRankSum=-1.538;QD=3.13;ReadPosRankSum=1.984;VQSLOD=1.3679;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:7:18.06:0,18,240	0/0:14,0:11:10.60:0,11,350	0/0:17,0:5:15.05:0,15,197	./.	0/0:14,0:14:30.10:0,30,390	./.	./.	0/0:31,0:31:84.28:0,84,1173	0/0:38,0:38:99:0,111,1551	0/0:24,0:24:72.20:0,72,978	0/0:29,0:29:57.19:0,57,796	0/1:2,5:1:0:0,0,0	1/1:1,4:2:3.01:48,3,0	0/0:39,0:39:78.22:0,78,1061	0/0:31,0:31:60.20:0,60,829	0/0:23,0:23:66.22:0,66,923	0/0:21,0:21:60.20:0,60,837	./.	./.	1/1:2,4:2:3.01:48,3,0	./.	0/0:25,0:25:69.20:0,69,939	0/0:32,0:32:90.30:0,90,1255	1/1:1,9:5:6.02:95,6,0	0/1:5,4:4:35.94:36,0,100	./.	./.
chr10	83503465	.	CCCCGTTAATTAACTG	C	426.64	PASS	AB=1.000;AC=3;AF=0.088;AN=34;BaseQRankSum=1.515;DP=347;FS=2.447;HRun=0;HaplotypeScore=63.2264;InbreedingCoeff=0.3696;MQ=24.57;MQ0=184;MQRankSum=-2.386;QD=11.85;ReadPosRankSum=1.551;VQSLOD=1.3081;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:11,0:7:21.07:0,21,1468	./.	./.	./.	0/0:27,0:18:42.14:0,42,2712	./.	./.	0/0:18,0:10:21.07:0,21,1507	0/0:24,0:8:24.06:0,24,1593	0/0:17,0:11:33.11:0,33,2115	0/0:13,0:8:12.04:0,12,808	./.	./.	0/0:24,0:13:21.07:0,21,1604	0/0:28,0:13:21.07:0,21,1387	0/0:20,0:11:15.05:0,15,945	0/0:11,0:5:12.04:0,12,764	./.	./.	0/1:22,0:7:99:99,0,598	1/1:10,3:6:9.03:419,9,0	0/0:18,0:6:12.04:0,12,668	0/0:13,0:11:21.07:0,21,1434	0/0:9,0:2:3.01:0,3,229	0/0:17,0:2:6.02:0,6,253	./.	0/0:5,0:1:3.01:0,3,210
chr10	83503692	.	G	GAC	83.39	PASS	AB=0.868;AC=3;AF=0.071;AN=42;BaseQRankSum=3.359;DP=514;FS=0.000;HRun=0;HaplotypeScore=75.0472;InbreedingCoeff=0.0512;MQ=34.93;MQ0=115;MQRankSum=-3.540;QD=1.17;ReadPosRankSum=0.586;VQSLOD=1.2561;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:15,0:14:30.10:0,30,405	0/0:53,0:4:9.03:0,9,124	0/0:42,0:4:4.94:0,5,80	./.	0/0:19,0:19:39.13:0,39,534	./.	./.	0/0:22,0:20:45.15:0,45,618	0/0:20,0:15:42.12:0,42,560	0/0:16,0:12:29.96:0,30,385	0/0:30,0:30:66.22:0,66,905	0/1:15,7:10:49.36:87,0,49	0/0:19,1:8:5.83:0,6,66	0/0:23,0:22:48.16:0,48,659	0/0:24,0:24:57.19:0,57,780	0/0:30,0:27:66.22:0,66,907	0/0:23,0:20:39.13:0,39,527	./.	./.	0/1:16,0:3:0:0,0,0	0/0:15,0:7:6.02:0,6,82	0/0:13,0:9:24.08:0,24,329	0/0:37,0:35:90.30:0,90,1236	0/0:8,0:4:3.01:0,3,41	0/1:27,6:9:80.85:81,0,223	./.	0/0:10,0:3:3.01:0,3,41
chr10	83503762	.	CAGAGAG	C	592.16	PASS	AB=0.876;AC=16;AF=0.571;AN=28;BaseQRankSum=-1.806;DP=337;FS=0.000;HRun=0;HaplotypeScore=69.5648;InbreedingCoeff=0.4082;MQ=35.52;MQ0=60;MQRankSum=1.133;QD=3.46;ReadPosRankSum=1.684;VQSLOD=1.3399;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:10,0:10:0.47:0,0,1	./.	./.	./.	0/1:19,0:13:0:0,0,0	./.	./.	./.	1/1:26,0:20:3.01:59,3,0	0/1:12,4:13:0:0,0,0	./.	0/0:11,0:5:5.75:0,6,40	0/0:8,0:4:8.90:0,9,74	1/1:16,0:11:6.02:105,6,0	1/1:16,8:22:3.01:44,3,0	0/0:12,0:15:2.10:0,2,37	1/1:11,0:9:12.04:236,12,0	./.	./.	1/1:29,0:16:2.46:150,2,0	./.	./.	1/1:23,0:14:3.01:59,3,0	1/1:5,0:3:2.84:35,3,0	./.	./.	0/0:4,0:2:0.89:0,1,2
chr10	83504352	.	CAG	C	189.30	PASS	AB=0.921;AC=6;AF=0.130;AN=46;BaseQRankSum=3.755;DP=584;FS=8.424;HRun=0;HaplotypeScore=45.8332;InbreedingCoeff=0.0452;MQ=33.62;MQ0=138;MQRankSum=-2.662;QD=1.28;ReadPosRankSum=1.835;VQSLOD=0.1823;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:5,0:5:6.02:0,6,112	./.	0/0:17,0:1:3.01:0,3,37	0/1:23,4:12:38.03:38,0,50	0/0:21,0:21:33.11:0,33,617	./.	1/1:12,4:4:6.02:88,6,0	0/0:21,0:21:27.07:0,27,441	0/0:20,0:19:48.64:0,49,898	0/0:11,0:10:6.02:0,6,112	0/0:19,0:18:12.04:0,12,225	0/1:30,1:8:38.03:38,0,50	0/1:31,1:6:38.02:38,0,50	0/0:23,0:22:12.04:0,12,224	0/0:21,0:21:30.09:0,30,556	0/0:23,0:22:39.13:0,39,730	0/0:21,0:19:42.12:0,42,752	0/0:5,0:1:3.01:0,3,56	0/0:5,0:2:3.01:0,3,53	0/0:99,1:84:52.27:0,52,1559	./.	0/0:14,0:14:9.03:0,9,168	0/0:18,0:17:17.84:0,18,337	0/0:22,8:10:9.03:0,9,168	0/1:36,6:18:99:102,0,258	./.	0/0:10,0:8:6.02:0,6,112
chr10	83505079	.	A	AG	954.20	PASS	AB=0.732;AC=23;AF=0.479;AN=48;BaseQRankSum=7.325;DP=781;FS=2.885;HRun=1;HaplotypeScore=42.2762;InbreedingCoeff=0.6910;MQ=28.34;MQ0=238;MQRankSum=-3.749;QD=3.26;ReadPosRankSum=3.523;VQSLOD=0.1238;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,10:3:6.02:90,6,0	0/0:15,0:13:27.09:0,27,351	./.	./.	./.	0/0:24,0:17:12.04:0,12,156	1/1:2,13:6:18.06:269,18,0	1/1:4,3:1:2.99:24,3,0	0/0:45,0:38:63.17:0,63,817	0/0:35,0:25:75.24:0,75,973	0/0:13,0:10:15.05:0,15,195	0/0:30,0:20:36.12:0,36,467	1/1:6,11:3:3.01:45,3,0	1/1:4,7:3:6.02:90,6,0	0/0:38,0:36:69.22:0,69,894	0/0:33,0:28:38.85:0,39,505	0/0:32,0:26:42.14:0,42,545	0/0:30,0:27:60.20:0,60,779	1/1:1,3:2:6.02:85,6,0	1/1:3,5:5:3.01:45,3,0	1/1:81,17:45:6.01:90,6,0	1/1:21,28:12:3.01:45,3,0	0/0:33,0:25:39.11:0,39,506	0/0:40,0:25:39.13:0,39,506	1/1:6,31:12:12.04:180,12,0	0/1:19,11:5:26.90:123,0,27	1/1:1,3:1:3.01:45,3,0	./.
chr10	83505849	.	A	AG	790.92	PASS	AB=0.514;AC=11;AF=0.239;AN=46;BaseQRankSum=7.347;DP=509;FS=12.019;HRun=1;HaplotypeScore=67.3387;InbreedingCoeff=0.7234;MQ=58.08;MQ0=10;MQRankSum=-7.378;QD=7.06;ReadPosRankSum=-0.245;VQSLOD=-0.7038;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:7:21.07:0,21,294	0/0:21,0:9:27.09:0,27,377	0/0:24,0:14:26.95:0,27,350	1/1:3,28:13:2.56:45,3,0	0/0:21,0:21:60.16:0,60,815	./.	./.	0/0:20,0:20:57.19:0,57,794	0/0:20,0:19:51.16:0,51,693	0/0:15,0:15:42.13:0,42,586	0/0:27,0:27:78.25:0,78,1074	0/0:0,8:1:0:0,0,0	1/1:0,17:8:18.06:285,18,0	0/0:23,0:23:63.21:0,63,879	0/0:24,0:24:66.21:0,66,904	0/0:55,0:55:99:0,156,2153	0/0:29,0:29:81.27:0,81,1127	0/0:1,1:2:0.89:0,1,2	./.	0/0:43,1:43:99:0,129,1762	1/1:3,25:8:15.05:238,15,0	0/0:22,0:22:60.20:0,60,831	0/0:27,0:27:75.25:0,75,1047	1/1:1,13:4:12.04:191,12,0	0/1:1,18:6:29.93:131,0,30	1/1:0,2:1:3.01:48,3,0	./.
chr10	83505963	.	A	AGTGTTG	565.65	PASS	AB=0.727;AC=5;AF=0.125;AN=40;BaseQRankSum=5.548;DP=465;FS=8.935;HRun=0;HaplotypeScore=121.7512;InbreedingCoeff=0.6216;MQ=61.97;MQ0=13;MQRankSum=-5.425;QD=6.29;ReadPosRankSum=0.813;VQSLOD=1.8553;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:10,0:10:27.07:0,27,604	0/0:32,0:28:77.56:0,78,1647	0/0:20,0:14:36.09:0,36,757	1/1:32,1:8:5.93:69,6,0	0/0:25,0:25:66.17:0,66,1537	./.	./.	0/0:18,0:18:48.12:0,48,1120	0/0:18,0:18:51.17:0,51,1204	0/0:13,0:13:33.11:0,33,809	0/0:26,0:26:72.23:0,72,1668	./.	./.	0/0:18,0:18:48.16:0,48,1181	0/0:22,0:22:60.16:0,60,1376	0/0:38,0:38:99:0,108,2363	0/0:26,0:26:75.24:0,75,1761	./.	./.	0/0:28,0:27:81.25:0,81,1810	0/0:24,0:3:5.88:0,6,36	0/0:25,0:25:62.78:0,63,1257	0/0:23,0:23:66.20:0,66,1526	1/1:30,5:9:21.07:444,21,0	0/1:5,2:3:40.92:166,0,41	./.	0/0:3,0:2:2.97:0,3,20
chr10	83506127	.	TTTTTC	T	426.41	PASS	AC=6;AF=0.167;AN=36;BaseQRankSum=4.673;DP=486;FS=0.000;HRun=0;HaplotypeScore=84.1164;InbreedingCoeff=0.9146;MQ=41.46;MQ0=93;MQRankSum=-4.061;QD=7.48;ReadPosRankSum=-1.755;VQSLOD=1.1428;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:14,0:11:27.09:0,27,809	0/0:26,0:9:27.09:0,27,777	0/0:26,0:11:33.11:0,33,864	1/1:3,26:9:6.02:121,6,0	0/0:11,0:9:27.09:0,27,801	./.	./.	0/0:25,0:24:63.22:0,63,1748	0/0:33,0:30:90.31:0,90,2710	0/0:18,0:14:39.13:0,39,1153	0/0:21,0:19:54.18:0,54,1571	./.	./.	0/0:22,0:19:51.18:0,51,1534	0/0:19,0:16:42.01:0,42,1263	0/0:30,0:28:78.27:0,78,2300	0/0:18,0:17:45.15:0,45,1355	./.	./.	0/0:47,8:37:14.91:0,15,2085	1/1:7,15:4:9.03:181,9,0	0/0:29,0:28:81.28:0,81,2374	0/0:38,0:36:87.30:0,87,2583	./.	./.	./.	1/1:2,4:4:12.04:241,12,0
chr10	83506877	.	TTAA	T	492.19	PASS	AB=0.765;AC=7;AF=0.152;AN=46;BaseQRankSum=8.749;DP=613;FS=0.000;HRun=0;HaplotypeScore=128.4592;InbreedingCoeff=0.0630;MQ=49.20;MQ0=38;MQRankSum=-7.140;QD=2.02;ReadPosRankSum=-1.002;VQSLOD=2.3638;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:16,0:16:48.11:0,48,919	0/0:23,0:8:14.17:0,14,306	0/0:14,0:10:24:0,24,395	0/1:57,25:56:99:369,0,794	0/0:15,0:15:45.13:0,45,985	./.	./.	0/0:20,0:20:48.12:0,48,987	0/0:29,0:29:87.27:0,87,1766	0/0:15,0:15:42.14:0,42,983	0/0:13,0:13:30.10:0,30,685	0/0:42,2:40:77.44:0,77,884	0/0:14,1:21:25.65:0,26,351	0/0:13,0:13:33.08:0,33,601	0/0:17,0:17:36.11:0,36,802	0/0:25,0:25:75.24:0,75,1743	0/0:16,0:15:39.07:0,39,712	./.	1/1:5,1:3:3.01:36,3,0	0/0:30,1:33:20.78:0,21,577	0/1:28,8:29:99:106,0,551	0/0:24,0:24:69.20:0,69,1473	0/0:17,0:17:36.10:0,36,778	0/1:46,8:38:61.96:62,0,557	0/1:25,10:20:15.50:16,0,562	./.	0/1:9,6:11:24.10:24,0,266
chr10	83506878	.	TA	T	1944.25	PASS	AB=0.735;AC=14;AF=0.304;AN=46;BaseQRankSum=8.315;DP=621;FS=11.505;HRun=11;HaplotypeScore=104.7048;InbreedingCoeff=0.2467;MQ=48.84;MQ0=39;MQRankSum=-4.185;QD=5.18;ReadPosRankSum=3.503;VQSLOD=0.8713;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:16,0:16:33.07:0,33,344	0/0:22,0:8:12.03:0,12,125	0/0:14,0:10:1.11:0,1,144	1/1:58,30:57:18.97:486,19,0	0/0:16,0:16:39.10:0,39,414	./.	./.	0/0:19,1:20:14.47:0,14,359	0/0:28,1:29:38.51:0,39,614	0/0:15,0:15:39.10:0,39,416	0/0:12,1:13:5.43:0,5,263	0/1:22,26:41:99:362,0,118	0/1:20,5:21:96.40:96,0,105	0/1:11,3:14:22.26:22,0,184	0/0:16,0:16:33.07:0,33,344	0/0:24,0:24:69.17:0,69,735	0/0:14,1:14:4.47:0,4,237	./.	1/1:6,0:3:2.04:6,2,0	0/1:21,12:34:99:226,0,148	0/1:25,16:30:39.48:237,0,39	0/0:24,0:24:54.14:0,54,575	0/0:17,0:17:30.08:0,30,320	0/1:35,26:42:15.01:261,0,15	1/1:19,17:21:15.14:319,15,0	./.	1/1:10,5:11:10.98:80,11,0
chr10	83506891	.	ATG	A	269.78	PASS	AB=0.862;AC=6;AF=0.115;AN=52;BaseQRankSum=7.350;DP=724;FS=1.791;HRun=0;HaplotypeScore=118.2281;InbreedingCoeff=-0.1374;MQ=42.72;MQ0=57;MQRankSum=-7.080;QD=0.87;ReadPosRankSum=-2.768;VQSLOD=1.7384;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:4:9.03:0,9,107	0/0:13,0:13:39.13:0,39,722	0/0:10,0:3:9.03:0,9,173	0/0:9,0:6:9.03:0,9,139	0/1:80,24:69:99:253,0,1145	0/0:19,0:19:54.18:0,54,968	0/0:2,0:2:3.01:0,3,36	0/0:8,0:4:12.03:0,12,160	0/0:20,0:20:48.16:0,48,856	0/0:28,0:28:81.26:0,81,1489	0/0:17,0:17:45.15:0,45,822	0/0:15,0:15:39.12:0,39,652	0/0:51,2:44:84.59:0,85,1244	0/0:32,1:24:47.17:0,47,649	0/0:14,0:14:36.12:0,36,632	0/0:17,0:17:39.13:0,39,720	0/0:26,0:26:69.22:0,69,1271	0/0:16,0:15:39.13:0,39,673	./.	0/1:10,0:5:1.23:1,0,35	0/0:57,1:53:99:0,110,1403	0/1:53,6:38:52.05:52,0,724	0/0:26,0:26:72.22:0,72,1278	0/0:17,0:17:39.07:0,39,609	0/1:71,7:47:28.33:28,0,825	0/1:37,9:28:21.78:22,0,770	./.	0/1:8,6:8:28.06:28,0,107
chr10	83507038	.	TA	T	118.42	PASS	AC=4;AF=0.087;AN=46;BaseQRankSum=4.074;DP=651;FS=10.664;HRun=1;HaplotypeScore=66.9640;InbreedingCoeff=0.7574;MQ=42.78;MQ0=80;MQRankSum=-3.619;QD=10.77;ReadPosRankSum=-1.096;VQSLOD=0.2224;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:3:5.98:58,6,0	0/0:6,0:6:15.05:0,15,228	0/0:17,0:5:12.02:0,12,134	0/0:19,0:5:8.06:0,8,99	0/0:30,0:14:12.04:0,12,186	0/0:26,0:26:75.20:0,75,1072	./.	./.	0/0:27,0:27:75.21:0,75,1122	0/0:24,0:24:72.24:0,72,1108	0/0:35,0:35:99:0,99,1432	0/0:23,0:23:69.23:0,69,1077	0/0:40,1:29:36.05:0,36,531	0/0:42,3:35:45.14:0,45,698	0/0:25,0:25:69.22:0,69,1057	0/0:24,0:24:69.23:0,69,1062	0/0:28,0:28:81.26:0,81,1238	0/0:20,0:20:57.16:0,57,865	./.	./.	0/0:98,0:47:14.81:0,15,174	0/0:28,0:7:6.02:0,6,93	0/0:25,0:25:72.16:0,72,1074	0/0:21,0:21:51.16:0,51,771	0/0:19,0:7:6.02:0,6,94	0/0:38,0:24:72.16:0,72,1030	1/1:0,5:4:12.04:164,12,0	./.
chr10	83507149	.	A	AG	1745.67	PASS	AB=0.710;AC=18;AF=0.321;AN=56;BaseQRankSum=10.426;DP=742;FS=15.520;HRun=0;HaplotypeScore=107.5163;InbreedingCoeff=0.3918;MQ=59.22;MQ0=30;MQRankSum=-9.309;QD=6.47;ReadPosRankSum=-2.740;VQSLOD=2.0632;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,7:7:15.01:180,15,0	0/0:12,0:12:33.08:0,33,440	0/0:35,0:34:98.86:0,99,1338	0/0:18,0:18:51.17:0,51,700	0/1:26,12:29:99:354,0,319	0/0:25,0:25:72.21:0,72,968	1/1:4,2:3:2.88:15,3,0	1/1:2,3:2:2.90:16,3,0	0/0:31,0:31:87.29:0,87,1216	0/0:23,0:23:63.19:0,63,849	0/0:16,0:16:42.14:0,42,583	0/0:17,0:17:51.14:0,51,679	0/1:28,23:33:99:207,0,340	0/1:23,19:31:83.07:83,0,649	0/0:26,0:26:63.20:0,63,864	0/0:21,0:21:60.20:0,60,836	0/0:41,0:41:99:0,117,1618	0/0:25,0:24:69.20:0,69,943	1/1:7,4:9:15.57:124,16,0	1/1:2,2:4:6.02:96,6,0	0/0:76,30:89:21.82:0,22,2496	0/1:20,8:14:99:267,0,131	0/0:23,0:23:63.19:0,63,859	0/0:42,0:42:99:0,111,1529	0/1:16,17:22:99:283,0,289	0/1:19,16:21:99:203,0,410	1/1:1,4:2:6.02:95,6,0	0/0:9,0:8:15.05:0,15,209
chr10	83511536	.	T	TG	93.45	PASS	AB=0.782;AC=3;AF=0.054;AN=56;BaseQRankSum=6.422;DP=799;FS=7.072;HRun=0;HaplotypeScore=89.8467;InbreedingCoeff=-0.0574;MQ=62.43;MQ0=15;MQRankSum=-6.578;QD=0.83;ReadPosRankSum=1.606;VQSLOD=1.1848;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,159,2187	0/0:10,0:10:30.10:0,30,420	0/0:22,0:17:48.05:0,48,605	0/0:28,0:22:63.18:0,63,840	0/1:24,7:25:99:110,0,744	0/0:19,0:18:51.12:0,51,675	0/0:37,0:37:99:0,105,1468	0/0:37,2:36:99:0,105,1451	0/0:33,0:33:93.30:0,93,1283	0/0:26,0:25:75.25:0,75,1035	0/0:17,0:16:48.16:0,48,671	0/0:33,0:33:99:0,99,1351	0/1:33,9:31:30.42:30,0,936	0/0:31,7:29:15.62:0,16,909	0/0:33,0:33:99:0,99,1355	0/0:24,0:24:72.24:0,72,1005	0/0:22,0:22:63.21:0,63,877	0/0:18,0:18:51.17:0,51,708	0/0:31,1:32:93.29:0,93,1267	0/0:16,1:14:29.95:0,30,533	0/0:32,0:30:87.28:0,87,1129	0/0:24,2:26:26.37:0,26,822	0/0:20,0:19:48.15:0,48,644	0/0:26,0:25:75.25:0,75,1048	0/1:24,11:26:52.83:53,0,753	0/0:32,3:32:65.31:0,65,1195	0/0:26,0:26:69.22:0,69,947	0/0:7,0:7:21.07:0,21,289
chr10	83511774	.	GTC	G	396.03	PASS	AB=0.779;AC=6;AF=0.107;AN=56;BaseQRankSum=8.213;DP=561;FS=10.181;HRun=0;HaplotypeScore=89.7010;InbreedingCoeff=-0.1236;MQ=52.87;MQ0=11;MQRankSum=-6.678;QD=1.91;ReadPosRankSum=1.795;VQSLOD=1.1198;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:59.47:0,59,1078	0/0:7,0:7:21.07:0,21,374	0/0:22,0:12:12.65:0,13,335	0/0:26,0:15:42.12:0,42,682	0/1:21,11:20:80.29:80,0,477	0/0:19,0:19:54.17:0,54,943	0/0:19,0:18:48.16:0,48,851	0/0:19,0:17:14.81:0,15,675	0/0:15,0:15:42.14:0,42,744	0/0:19,0:19:51.17:0,51,916	0/0:17,0:17:45.15:0,45,809	0/0:13,0:13:39.13:0,39,695	0/1:24,10:26:99:103,0,773	0/1:21,13:24:34.80:35,0,707	0/0:17,1:18:45.12:0,45,750	0/0:12,1:13:33.11:0,33,594	0/0:7,0:7:17.89:0,18,283	0/0:5,0:5:12.04:0,12,216	0/0:8,0:6:18.04:0,18,294	0/0:10,0:10:30.07:0,30,490	0/0:37,0:34:66.22:0,66,1182	0/1:24,9:20:14.70:15,0,405	0/0:10,0:10:24.06:0,24,402	0/0:20,0:20:57.20:0,57,1024	0/1:19,7:18:99:118,0,448	0/1:40,8:37:99:169,0,1193	0/0:15,0:14:33.11:0,33,592	0/0:10,0:8:24.08:0,24,408
chr10	83511814	.	TTC	T	343.68	PASS	AB=0.947;AC=17;AF=0.340;AN=50;BaseQRankSum=1.033;DP=783;FS=14.537;HRun=0;HaplotypeScore=110.1524;InbreedingCoeff=0.1315;MQ=36.53;MQ0=125;MQRankSum=-0.097;QD=1.15;ReadPosRankSum=1.389;VQSLOD=1.4723;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:42:23.48:0,23,188	1/1:5,0:5:3:28,3,0	./.	./.	./.	0/1:19,0:18:15.71:28,0,16	0/0:31,0:23:13.25:0,13,124	0/0:44,0:24:3.01:0,3,31	1/1:13,0:12:4.30:16,4,0	0/0:21,0:19:11.94:0,12,120	1/1:13,0:12:3:25,3,0	0/1:17,3:17:27.35:84,0,27	0/0:55,0:30:2.61:0,3,58	0/1:63,0:31:20.28:20,0,21	0/0:9,0:9:2.94:0,3,18	0/0:14,0:18:8.97:0,9,71	0/1:11,0:9:29.43:29,0,92	1/1:12,3:13:15.90:131,16,0	0/0:23,0:12:6.85:0,7,46	0/0:10,0:7:2.99:0,3,23	0/1:50,0:40:24.64:25,0,53	1/1:26,0:18:3.31:15,3,0	0/0:8,0:8:2.22:0,2,7	0/1:24,3:27:87.11:87,0,222	0/1:27,0:18:0:0,0,0	0/0:76,0:42:23.45:0,23,188	0/0:22,0:17:4.22:0,4,24	0/0:17,0:10:6.02:0,6,76
chr10	83512203	.	T	TA	112.18	PASS	AB=0.828;AC=2;AF=0.036;AN=56;BaseQRankSum=8.248;DP=994;FS=1.537;HRun=0;HaplotypeScore=150.7298;InbreedingCoeff=-0.0421;MQ=45.13;MQ0=61;MQRankSum=-7.215;QD=0.87;ReadPosRankSum=-0.981;VQSLOD=2.5610;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:48.98:0,49,306	0/0:12,0:12:36.12:0,36,490	0/0:18,0:4:12.04:0,12,165	0/0:14,0:2:6.02:0,6,83	0/0:80,0:49:55.60:0,56,853	0/0:21,1:22:43.90:0,44,742	0/0:32,0:28:44.71:0,45,392	0/0:27,0:18:47.29:0,47,299	0/0:22,0:23:66.22:0,66,922	0/0:30,0:30:80.07:0,80,1073	0/0:18,0:18:51.13:0,51,686	0/0:36,0:36:99:0,102,1396	0/0:80,0:50:99:0,119,1151	0/0:51,0:37:77.37:0,77,797	0/0:26,0:25:75.24:0,75,1028	0/0:27,0:27:81.27:0,81,1129	0/0:20,0:21:49.91:0,50,824	0/0:16,0:16:48.16:0,48,668	0/0:15,0:11:29.97:0,30,322	0/0:31,0:26:37.42:0,37,243	0/0:25,0:19:41.96:0,42,399	0/0:72,0:47:77.21:0,77,771	0/0:21,0:22:43.84:0,44,770	0/0:22,0:23:60.19:0,60,821	0/0:58,0:38:76.58:0,77,748	0/1:73,13:55:59.84:60,0,724	0/0:40,0:31:48:0,48,365	0/1:12,8:23:99:141,0,105
chr10	83512204	.	C	CA	6358.74	PASS	AB=0.811;AC=27;AF=0.500;AN=54;BaseQRankSum=5.689;DP=1055;FS=10.663;HRun=9;HaplotypeScore=142.6376;InbreedingCoeff=0.8618;MQ=44.81;MQ0=69;MQRankSum=-6.418;QD=8.34;ReadPosRankSum=-1.247;VQSLOD=1.6829;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:27:28.05:525,28,0	0/0:11,0:12:23.03:0,23,188	0/1:18,0:5:0:0,0,0	./.	1/1:63,1:55:73.72:476,74,0	0/0:23,0:22:42.58:0,43,455	1/1:8,24:26:55.18:568,55,0	1/1:5,21:17:19.06:438,19,0	0/0:23,0:23:62.96:0,63,542	0/0:31,0:30:74.91:0,75,642	0/0:18,0:18:47.98:0,48,416	0/0:35,0:35:89.96:0,90,778	1/1:58,7:52:99:552,100,0	0/1:29,2:40:2.55:236,0,3	0/0:27,0:25:59.98:0,60,521	0/0:26,0:27:74.01:0,74,631	0/0:21,0:21:48.58:0,49,507	0/0:16,0:16:38.98:0,39,339	0/1:11,5:11:8.01:140,0,8	1/1:14,24:29:57.89:588,58,0	1/1:7,0:19:31.52:159,32,0	1/1:56,7:51:62.60:337,63,0	0/0:22,0:22:32.45:0,32,375	0/0:23,0:23:53.99:0,54,469	1/1:38,3:39:62.90:335,63,0	1/1:87,21:58:50.19:941,50,0	1/1:28,21:38:33.88:668,34,0	1/1:22,6:23:23.56:397,24,0
chr10	83512209	.	A	AAAAT	3026.33	PASS	AB=0.928;AC=11;AF=0.204;AN=54;BaseQRankSum=14.836;DP=1072;FS=12.913;HRun=0;HaplotypeScore=221.9687;InbreedingCoeff=0.1351;MQ=44.66;MQ0=67;MQRankSum=-1.917;QD=4.90;ReadPosRankSum=1.177;VQSLOD=1.5931;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:27:52.01:0,52,318	0/0:9,0:9:24.08:0,24,405	0/0:16,0:2:2.90:0,3,16	./.	0/1:90,7:60:99:586,0,123	0/0:24,0:24:60.84:0,61,1033	0/0:29,0:23:17.61:0,18,261	0/0:32,0:23:57.95:0,58,383	0/0:25,0:25:72.18:0,72,1176	0/0:34,0:33:90.20:0,90,1437	0/0:19,0:19:51.14:0,51,877	0/0:32,0:32:93.31:0,93,1630	0/1:75,12:52:38.90:760,0,39	0/1:51,7:41:99:379,0,150	0/0:26,0:24:63.20:0,63,1095	0/0:26,0:26:78.25:0,78,1342	0/0:24,0:24:64.16:0,64,1115	0/0:16,0:16:45.11:0,45,742	0/0:16,0:12:27.20:0,27,216	0/0:39,0:29:13.19:0,13,244	1/1:24,0:19:8.64:227,9,0	1/1:82,5:52:6.19:590,6,0	0/0:23,0:22:27.14:0,27,877	0/0:23,0:23:63.12:0,63,1031	0/1:60,2:37:29.48:141,0,29	0/1:98,13:62:99:388,0,725	0/1:61,0:40:7.33:7,0,483	0/1:27,2:23:95.49:95,0,284
chr10	83512212	.	A	AAG	1475.59	PASS	AB=0.908;AC=8;AF=0.148;AN=54;BaseQRankSum=9.610;DP=1063;FS=5.593;HRun=0;HaplotypeScore=178.8973;InbreedingCoeff=0.2913;MQ=45.05;MQ0=64;MQRankSum=-0.367;QD=3.78;ReadPosRankSum=2.050;VQSLOD=2.3839;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:28:48.31:0,48,227	0/0:11,0:11:30.04:0,30,370	1/1:13,0:2:2.04:6,2,0	./.	0/1:78,7:59:99:410,0,158	0/0:24,0:24:40.14:0,40,821	0/0:30,0:24:27.95:0,28,195	0/0:35,0:27:63.56:0,64,388	0/0:25,0:25:72.16:0,72,947	0/0:34,0:33:93.02:0,93,1182	0/0:19,0:19:57.09:0,57,744	0/0:32,0:32:90.30:0,90,1281	0/1:78,2:49:16.05:320,0,16	0/1:57,1:41:99:266,0,192	0/0:25,0:23:69.20:0,69,918	0/0:26,0:26:75.21:0,75,1045	0/0:25,0:25:49.12:0,49,927	0/0:15,0:15:42.13:0,42,580	0/0:17,0:13:31.77:0,32,240	0/0:39,0:29:4.64:0,5,126	0/0:24,0:20:6.47:0,6,74	0/1:67,10:48:56.48:263,0,56	0/0:26,0:25:49.74:0,50,741	0/0:25,0:25:66.08:0,66,858	1/1:53,2:36:22.36:342,22,0	0/0:102,3:59:97.71:0,98,610	0/0:63,0:40:44.55:0,45,420	0/0:27,2:23:35.79:0,36,193
chr10	83512798	.	AG	A	6603.19	PASS	AB=0.787;AC=8;AF=0.143;AN=56;BaseQRankSum=3.560;DP=2236;DS;FS=1.812;HRun=1;HaplotypeScore=328.2041;InbreedingCoeff=-0.1667;MQ=47.22;MQ0=50;MQRankSum=-3.427;QD=7.86;ReadPosRankSum=1.771;VQSLOD=2.1865;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:94,43:134:99:1527,0,2066	0/0:9,0:9:27.09:0,27,422	0/0:28,0:25:75.24:0,75,1174	0/0:29,0:28:84.25:0,84,1289	0/0:188,0:166:99:0,321,4494	0/0:17,0:17:42.11:0,42,600	0/1:56,32:83:99:1149,0,1648	0/1:38,34:69:99:1168,0,1064	0/0:33,0:33:81.26:0,81,1268	0/0:23,0:23:69.19:0,69,1052	0/0:15,0:15:45.13:0,45,682	0/0:24,0:24:66.23:0,66,1054	0/0:145,0:124:99:0,286,4333	0/0:159,0:122:99:0,237,3530	0/0:37,0:37:99:0,102,1604	0/0:24,0:24:57.19:0,57,909	0/0:38,0:38:90.31:0,90,1407	0/0:22,0:22:63.04:0,63,951	0/1:30,13:42:99:449,0,948	0/1:60,18:74:99:555,0,1832	0/0:249,0:231:99:0,517,7426	0/0:150,0:133:99:0,313,4627	0/0:22,0:22:63.21:0,63,996	0/0:31,0:31:72.21:0,72,1096	0/0:153,0:135:99:0,294,4120	0/1:216,33:217:99:765,0,6760	0/1:51,21:70:99:598,0,1469	0/1:88,13:90:99:392,0,2082
chr10	83513698	.	A	AT	14556.04	PASS	AB=0.652;AC=14;AF=0.250;AN=56;BaseQRankSum=24.562;DP=1610;FS=73.828;HRun=0;HaplotypeScore=230.6474;InbreedingCoeff=-0.3338;MQ=49.33;MQ0=91;MQRankSum=-24.982;QD=11.25;ReadPosRankSum=0.601;VQSLOD=2.5398;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:61,55:106:99:358,0,1983	0/0:7,0:7:18.06:0,18,252	0/0:21,0:21:54.17:0,54,718	0/0:20,0:18:48.14:0,48,622	0/1:58,70:86:99:567,0,1822	0/0:21,0:21:63.21:0,63,876	0/1:21,27:46:99:428,0,667	0/1:28,12:30:75.21:75,0,826	0/0:28,0:28:84.27:0,84,1154	0/0:25,0:23:66.21:0,66,905	0/0:23,0:23:69.22:0,69,951	0/0:26,0:26:78.25:0,78,1073	0/1:43,84:102:99:2582,0,925	0/1:42,95:110:99:2629,0,811	0/0:22,0:22:66.22:0,66,923	0/0:19,0:19:54.18:0,54,755	0/0:30,0:29:90.24:0,90,1216	0/0:24,0:24:72.16:0,72,932	0/1:26,25:46:99:680,0,910	0/1:28,24:42:89.42:89,0,981	0/1:32,71:91:99:1958,0,802	0/1:53,90:90:99:1365,0,1438	0/0:21,0:21:63.21:0,63,878	0/0:29,0:29:87.29:0,87,1210	0/1:42,18:47:54.87:55,0,1408	0/1:70,90:117:99:2244,0,1446	0/1:31,41:66:99:951,0,945	0/1:17,38:38:99:575,0,617
chr10	83514432	.	CACACACACACACAA	C	1452.36	PASS	AB=1.000;AC=19;AF=0.396;AN=48;BaseQRankSum=0.760;DP=389;FS=8.352;HRun=0;HaplotypeScore=133.0932;InbreedingCoeff=0.5821;MQ=38.62;MQ0=62;MQRankSum=-0.845;QD=7.94;ReadPosRankSum=-0.710;VQSLOD=1.5986;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,1:18:5.10:111,5,0	0/0:5,0:5:7.84:0,8,295	./.	./.	./.	0/0:24,0:24:30.22:0,30,671	0/0:21,0:16:0.47:0,0,2	1/1:16,0:10:9.82:59,10,0	0/0:10,0:9:16.38:0,16,227	0/0:9,0:9:17.92:0,18,541	0/0:18,0:16:10.45:0,10,402	0/0:17,0:15:23.79:0,24,389	1/1:12,0:10:10.33:196,10,0	1/1:6,0:6:8.40:66,8,0	0/0:13,0:12:10.66:0,11,349	0/0:17,0:15:18.94:0,19,412	0/0:17,0:15:8.35:0,8,800	0/1:20,0:12:5.84:6,0,546	1/1:6,7:11:21.86:541,22,0	1/1:5,4:9:3.01:93,3,0	0/0:16,0:7:1.72:0,2,3	./.	0/0:9,0:9:9.52:0,10,467	0/1:41,0:36:3.63:4,0,830	0/1:14,0:10:5.32:18,0,5	1/1:15,0:13:10.65:329,11,0	1/1:12,0:11:21.13:195,21,0	0/0:4,0:2:1.15:0,1,14
chr10	83514436	.	CACACACACAA	C	1316.21	PASS	AB=1.000;AC=22;AF=0.458;AN=48;BaseQRankSum=-0.155;DP=382;FS=16.258;HRun=0;HaplotypeScore=124.9753;InbreedingCoeff=0.5222;MQ=38.17;MQ0=63;MQRankSum=-1.862;QD=6.42;ReadPosRankSum=0.354;VQSLOD=1.3991;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:20:7.96:138,8,0	0/0:5,0:5:7.84:0,8,197	./.	./.	./.	0/0:25,0:25:10.17:0,10,463	0/0:7,12:14:0.47:0,0,1	1/1:17,0:11:15.64:96,16,0	0/0:11,0:10:9.05:0,9,137	0/0:10,0:10:20.31:0,20,401	0/0:16,0:14:11.25:0,11,262	0/0:19,0:17:26.31:0,26,264	1/1:11,0:9:10.41:168,10,0	1/1:6,0:6:8.43:66,8,0	0/0:13,0:12:11.37:0,11,255	0/0:16,0:14:18.92:0,19,266	0/1:18,0:16:5.89:6,0,462	0/1:19,0:11:8.43:8,0,372	1/1:10,0:8:20.91:379,21,0	1/1:9,0:9:3.01:87,3,0	0/0:17,0:8:1.83:0,2,4	./.	0/0:9,0:9:10.80:0,11,329	0/1:42,0:37:19.78:20,0,465	0/1:13,0:9:5.47:17,0,5	1/1:16,0:13:18.65:320,19,0	1/1:12,0:11:21.90:161,22,0	1/1:5,0:2:2.97:20,3,0
chr10	83514446	.	AACACACACAC	A	1152.78	PASS	AB=1.000;AC=15;AF=0.313;AN=48;BaseQRankSum=3.848;DP=370;FS=14.526;HRun=0;HaplotypeScore=126.6028;InbreedingCoeff=0.4794;MQ=37.43;MQ0=64;MQRankSum=-3.170;QD=10.77;ReadPosRankSum=-1.828;VQSLOD=1.5653;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:14:4.18:80,4,0	0/0:4,0:4:5.22:0,5,140	./.	./.	./.	0/0:25,0:25:12.58:0,13,458	./.	0/0:16,0:10:7.77:0,8,40	0/0:10,0:9:16.23:0,16,194	0/0:10,0:9:1.08:0,1,447	0/0:13,0:11:7.79:0,8,267	0/0:19,0:17:23.38:0,23,327	1/1:12,0:10:22.50:220,22,0	0/1:8,0:8:8.15:41,0,8	0/0:12,0:10:5.44:0,5,212	0/0:15,0:14:11.05:0,11,360	0/0:18,0:16:13.30:0,13,528	0/0:19,0:12:23.02:0,23,435	0/1:12,0:8:1.95:257,0,2	1/1:7,0:7:3.01:74,3,0	0/0:15,0:7:0.75:0,1,4	0/0:4,5:6:2.99:0,3,23	0/0:11,0:11:5.45:0,5,298	0/0:43,0:38:32.97:0,33,584	1/1:12,0:8:2.96:10,3,0	1/1:18,0:15:26.03:508,26,0	1/1:10,0:9:3.53:45,4,0	0/1:7,0:4:3.98:68,0,4
chr10	83515798	.	ACTT	A	2598.29	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=9.633;DP=554;FS=0.527;HRun=0;HaplotypeScore=68.5065;InbreedingCoeff=0.9803;MQ=56.10;MQ0=3;MQRankSum=1.586;QD=32.08;ReadPosRankSum=2.081;VQSLOD=4.0007;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.27:0,78,1767	0/0:12,0:12:36.12:0,36,786	0/0:16,0:3:9.03:0,9,192	./.	1/1:0,15:14:27.09:435,27,0	0/0:26,0:25:60.21:0,60,1360	0/0:23,0:22:48.16:0,48,1048	0/0:27,0:26:75.26:0,75,1680	0/0:18,0:18:45.15:0,45,1019	0/0:22,0:22:63.22:0,63,1389	0/0:19,0:19:42.14:0,42,928	0/0:15,0:15:33.11:0,33,720	1/1:0,9:9:21.07:349,21,0	1/1:1,15:14:27.09:450,27,0	0/0:22,0:22:60.21:0,60,1360	0/0:9,0:9:21.07:0,21,476	0/0:25,0:25:54.19:0,54,1224	0/0:18,0:17:48.16:0,48,1088	0/0:15,0:13:36.11:0,36,753	0/0:30,0:30:87.30:0,87,1877	0/0:22,0:22:50.92:0,51,1144	1/1:3,23:26:60.20:999,60,0	0/0:25,0:25:72.25:0,72,1631	0/0:27,0:27:63.22:0,63,1427	1/1:0,15:15:33.10:537,33,0	0/0:23,0:23:66.23:0,66,1480	0/0:22,0:22:54.19:0,54,1196	0/0:5,0:5:15.05:0,15,340
chr10	83516305	.	GA	G	700.53	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.051;DP=645;FS=0.737;HRun=7;HaplotypeScore=63.9778;InbreedingCoeff=0.9978;MQ=81.89;MQ0=0;MQRankSum=-2.718;QD=24.16;ReadPosRankSum=1.419;VQSLOD=4.0542;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.22:0,81,983	0/0:8,0:8:24.07:0,24,291	0/0:25,0:24:41.72:0,42,483	0/0:25,0:24:56.99:0,57,662	0/0:20,0:20:48.12:0,48,604	0/0:18,0:18:51.15:0,51,629	0/0:22,0:22:66.20:0,66,817	0/0:30,0:30:78.24:0,78,968	0/0:27,0:27:81.23:0,81,992	0/0:22,0:22:51.16:0,51,642	0/0:16,0:16:39.12:0,39,490	0/0:27,0:27:78.24:0,78,970	0/0:14,0:14:39.12:0,39,491	0/0:25,0:25:75.23:0,75,930	0/0:27,0:27:78.24:0,78,971	0/0:23,0:23:66.20:0,66,819	0/0:24,0:24:63.20:0,63,789	0/0:29,0:29:81.26:0,81,1018	0/0:17,0:17:48.15:0,48,594	0/0:27,0:27:72.22:0,72,893	1/1:0,29:29:78.18:795,78,0	0/0:17,0:17:45.14:0,45,566	0/0:22,0:22:60.17:0,60,731	0/0:26,0:26:72.23:0,72,906	0/0:24,0:24:66.21:0,66,829	0/0:28,0:28:72.23:0,72,906	0/0:30,0:30:87.25:0,87,1052	0/0:15,0:15:45.14:0,45,566
chr10	83517713	.	AC	A	826.47	PASS	AB=0.670;AC=1;AF=0.018;AN=56;BaseQRankSum=3.743;DP=1313;FS=9.893;HRun=4;HaplotypeScore=231.2342;InbreedingCoeff=-0.0182;MQ=55.08;MQ0=75;MQRankSum=4.880;QD=13.55;ReadPosRankSum=0.041;VQSLOD=1.0161;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:83,0:75:99:0,196,3034	0/0:14,0:14:33.09:0,33,489	0/0:48,0:32:96.19:0,96,1420	0/0:57,0:43:99:0,108,1506	0/0:70,0:62:93.12:0,93,1470	0/0:37,0:37:99:0,99,1575	0/1:31,30:58:99:901,0,977	0/0:55,0:43:99:0,123,1921	0/0:29,0:28:81.27:0,81,1265	0/0:36,0:30:87.29:0,87,1355	0/0:29,0:29:48.15:0,48,741	0/0:42,0:42:99:0,123,1924	0/0:51,0:46:99:0,117,1851	0/0:51,1:43:99:0,117,1866	0/0:36,0:36:99:0,102,1598	0/0:35,0:35:99:0,102,1618	0/0:44,0:44:99:0,123,1940	0/0:46,0:46:99:0,132,2080	0/0:29,0:29:84.26:0,84,1277	0/0:29,0:29:66.22:0,66,1006	0/0:141,1:114:99:0,262,4090	0/0:51,0:43:99:0,99,1575	0/0:27,0:27:60.17:0,60,945	0/0:53,0:53:99:0,141,2213	0/0:34,0:31:72.25:0,72,1146	0/0:63,1:55:99:0,156,2440	0/0:37,0:37:99:0,111,1755	0/0:19,0:17:48.16:0,48,754
chr10	83518373	.	TG	T	4641.45	PASS	AB=0.911;AC=25;AF=0.446;AN=56;BaseQRankSum=13.174;DP=579;FS=51.647;HRun=1;HaplotypeScore=145.0837;InbreedingCoeff=0.7958;MQ=62.03;MQ0=2;MQRankSum=-12.218;QD=15.52;ReadPosRankSum=2.729;VQSLOD=1.7260;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,3:19:30.03:297,30,0	0/0:10,0:10:27.02:0,27,318	0/0:20,0:12:6.42:0,6,175	0/0:28,0:16:17.89:0,18,197	1/1:9,18:27:35.87:495,36,0	0/0:23,0:23:18.05:0,18,567	1/1:14,1:15:22.64:249,23,0	1/1:23,3:24:26.82:438,27,0	0/0:17,1:18:17.04:0,17,465	0/0:31,0:31:55.45:0,55,836	0/0:28,0:27:77.85:0,78,860	0/0:14,0:14:28.06:0,28,302	1/1:8,10:18:37.46:366,37,0	1/1:6,18:23:22.78:399,23,0	0/0:25,0:25:61.83:0,62,733	0/0:16,0:16:39:0,39,442	0/0:14,0:14:41.94:0,42,464	0/0:17,0:17:51.03:0,51,596	0/1:24,2:26:53.23:262,0,53	1/1:27,1:27:44.91:435,45,0	0/1:10,0:10:17.63:38,0,18	1/1:10,11:18:14.80:371,15,0	0/0:20,0:20:56.95:0,57,618	0/0:15,0:15:23.79:0,24,251	1/1:4,14:18:22.54:520,23,0	0/1:25,8:31:0.72:314,0,1	1/1:20,1:21:37.35:290,37,0	1/1:11,1:12:17.32:169,17,0
chr10	83518374	.	G	GT	938.71	PASS	AB=0.985;AC=22;AF=0.393;AN=56;BaseQRankSum=9.739;DP=605;FS=3.047;HRun=11;HaplotypeScore=170.6995;InbreedingCoeff=0.0301;MQ=60.51;MQ0=2;MQRankSum=-9.944;QD=2.27;ReadPosRankSum=0.141;VQSLOD=0.3235;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:19:16.55:33,0,17	0/0:10,0:10:20.86:0,21,159	0/1:20,0:12:6.05:6,0,92	0/1:25,0:14:10.65:11,0,36	0/1:28,0:28:7.61:40,0,8	0/1:22,2:24:14.79:15,0,260	0/1:15,0:15:8.93:27,0,9	0/1:28,0:26:5.68:52,0,6	0/0:17,2:20:12.45:0,12,258	0/0:32,0:33:63.17:0,63,461	0/0:28,1:28:26.26:0,26,386	0/1:17,1:19:59.87:60,0,73	0/1:19,0:19:1.93:38,0,2	0/1:26,0:25:28.04:32,0,28	0/0:23,0:24:54.29:0,54,397	0/0:17,0:17:26.81:0,27,207	0/0:15,0:15:38.82:0,39,297	0/0:16,2:18:14.39:0,14,294	1/1:26,0:26:37.21:184,37,0	1/1:30,0:29:18.32:132,18,0	0/0:10,0:10:2.73:0,3,33	0/1:22,0:19:18.82:71,0,19	0/1:20,2:22:16.12:16,0,254	0/0:15,0:16:22.95:0,23,168	0/1:19,0:19:17.79:18,0,25	1/1:33,0:31:31.77:266,32,0	0/1:23,0:23:10.52:37,0,11	1/1:12,0:12:16.35:78,16,0
chr10	83518379	.	T	TTG	3146.11	PASS	AB=0.910;AC=20;AF=0.357;AN=56;BaseQRankSum=14.380;DP=622;FS=3.584;HRun=0;HaplotypeScore=177.3510;InbreedingCoeff=0.4301;MQ=57.02;MQ0=2;MQRankSum=-12.863;QD=9.59;ReadPosRankSum=5.271;VQSLOD=3.4156;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,7:21:30.19:404,30,0	0/0:10,0:10:30.07:0,30,391	0/0:21,0:11:20.03:0,20,183	0/0:24,0:11:9.66:0,10,109	0/1:28,0:28:15.65:16,0,113	0/0:23,0:23:66.42:0,66,776	1/1:10,5:15:37.46:343,37,0	1/1:26,9:33:23.88:571,24,0	0/0:20,0:20:53.80:0,54,678	0/0:33,0:33:91.79:0,92,1118	0/0:28,0:27:80.88:0,81,1026	0/0:19,0:19:50.45:0,50,478	0/1:23,0:23:12.29:12,0,61	0/1:24,0:23:28.89:29,0,119	0/0:26,0:26:69.15:0,69,895	0/0:16,0:16:42.03:0,42,523	0/0:16,0:16:45.58:0,46,627	0/0:17,0:17:47.80:0,48,659	1/1:27,4:30:50.51:614,51,0	1/1:18,7:25:41.87:517,42,0	0/1:10,1:11:3.84:4,0,59	0/1:24,0:21:39.50:39,0,135	0/0:24,0:24:65.46:0,65,781	0/0:17,0:17:26.82:0,27,345	0/1:20,0:20:22.44:22,0,105	0/1:22,0:32:99:158,0,116	1/1:14,11:25:35.67:557,36,0	0/1:4,0:10:1.96:55,0,2
chr10	83518380	.	T	TG	1191.79	PASS	AB=0.983;AC=13;AF=0.232;AN=56;BaseQRankSum=11.540;DP=626;FS=5.779;HRun=0;HaplotypeScore=169.7188;InbreedingCoeff=-0.1600;MQ=56.97;MQ0=2;MQRankSum=-9.743;QD=4.23;ReadPosRankSum=3.595;VQSLOD=3.1872;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:21:24.80:96,0,25	0/0:10,0:10:30.07:0,30,371	0/0:21,0:11:17.94:0,18,156	0/0:24,0:11:10.37:0,10,114	0/1:28,0:28:38.67:143,0,39	0/0:24,0:24:58.71:0,59,755	0/1:15,0:15:19.18:73,0,19	0/1:34,2:34:30.45:135,0,30	0/0:20,0:20:48.87:0,49,625	0/0:33,0:33:96.10:0,96,1129	0/0:28,0:27:76.62:0,77,966	0/0:19,0:19:42.55:0,43,430	1/1:23,0:23:0.02:117,0,0	0/1:24,0:23:57.90:142,0,58	0/0:26,0:26:72.10:0,72,868	0/0:16,0:16:42.03:0,42,497	0/0:18,0:18:46.92:0,47,594	0/0:19,0:19:42.90:0,43,603	0/1:27,3:29:62.94:229,0,63	0/1:25,0:24:42.85:91,0,43	0/0:11,0:11:15.13:0,15,96	0/1:24,0:21:57.30:142,0,57	0/0:24,0:24:58.30:0,58,730	0/0:17,0:17:30.02:0,30,346	0/1:19,1:20:12.05:129,0,12	0/0:34,0:32:17.23:0,17,193	0/1:25,0:25:31.10:40,0,31	0/1:10,0:10:0.73:1,0,27
chr10	83518381	.	T	TTG	1633.30	PASS	AB=0.961;AC=17;AF=0.304;AN=56;BaseQRankSum=10.182;DP=632;FS=0.000;HRun=0;HaplotypeScore=184.5586;InbreedingCoeff=0.0444;MQ=56.66;MQ0=2;MQRankSum=-10.338;QD=4.95;ReadPosRankSum=3.802;VQSLOD=2.5968;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,4:21:22.93:122,0,23	0/0:9,0:9:27.07:0,27,356	0/0:21,0:11:21.45:0,21,179	0/0:25,0:12:11.11:0,11,126	0/1:28,0:28:7.22:7,0,136	0/0:24,0:24:69.42:0,69,784	1/1:12,3:15:1.58:164,2,0	0/1:34,2:34:21.83:141,0,22	0/0:21,0:21:53.79:0,54,660	0/0:31,0:31:91.75:0,92,1091	0/0:29,0:28:77.81:0,78,961	0/0:19,0:19:50.49:0,50,470	0/1:23,0:23:23.56:24,0,60	0/1:24,0:23:10.45:10,0,143	0/0:26,0:26:72.10:0,72,892	0/0:17,0:17:42.02:0,42,508	0/0:19,0:19:51.54:0,52,653	0/0:19,0:19:50.79:0,51,664	0/1:25,6:30:28.47:320,0,28	1/1:18,7:24:10:362,10,0	0/1:12,0:12:1.16:1,0,46	0/1:24,0:21:37.67:38,0,142	0/0:25,0:25:68.26:0,68,771	0/0:17,0:17:29.81:0,30,360	0/1:20,0:20:17.36:17,0,122	0/1:32,0:32:99:204,0,210	1/1:23,4:27:22.92:272,23,0	0/1:9,0:9:32.71:117,0,33
chr10	83518386	.	G	GTTTTT	5080.67	PASS	AB=0.968;AC=20;AF=0.357;AN=56;BaseQRankSum=9.760;DP=628;FS=15.304;HRun=11;HaplotypeScore=212.4675;InbreedingCoeff=0.8129;MQ=54.50;MQ0=2;MQRankSum=-11.702;QD=19.69;ReadPosRankSum=2.212;VQSLOD=0.8517;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:21:37.89:399,38,0	0/0:9,0:9:27.09:0,27,500	0/0:22,0:11:13.68:0,14,184	0/0:21,0:10:6.56:0,7,108	0/1:27,0:29:71.61:72,0,322	0/0:22,0:22:65.72:0,66,1041	1/1:12,0:12:33.52:345,34,0	1/1:38,0:36:44.85:359,45,0	0/0:23,0:23:57.11:0,57,955	0/0:34,0:34:99:0,99,1653	0/0:26,0:25:69.17:0,69,1205	0/0:17,0:17:40.54:0,41,524	0/0:23,0:23:34.04:0,34,300	0/0:24,0:23:25.83:0,26,344	0/0:23,0:23:60.20:0,60,1120	0/0:15,0:15:34.24:0,34,541	0/0:21,0:21:53.98:0,54,898	0/0:20,0:20:47.18:0,47,964	1/1:27,0:25:31.51:593,32,0	1/1:23,0:22:55.11:652,55,0	1/1:13,0:13:7.22:142,7,0	0/0:24,0:23:13.04:0,13,256	0/0:24,0:24:65.53:0,66,1043	0/0:18,0:18:32.75:0,33,476	0/1:21,0:21:12.37:12,0,421	1/1:25,8:33:17.82:1287,18,0	1/1:30,0:30:73.99:741,74,0	1/1:2,5:8:20.23:480,20,0
chr10	83518392	.	G	GTTT	3647.87	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=12.754;DP=631;FS=17.076;HRun=4;HaplotypeScore=180.8686;InbreedingCoeff=0.7012;MQ=56.61;MQ0=2;MQRankSum=-11.258;QD=11.19;ReadPosRankSum=2.198;VQSLOD=-0.7412;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:22:19.58:87,0,20	0/0:9,0:9:27.06:0,27,348	0/0:21,0:12:1.34:0,1,60	0/0:23,0:11:9.30:0,9,163	1/1:24,8:32:51.57:532,52,0	0/0:24,0:24:68.78:0,69,845	1/1:12,0:12:5.85:59,6,0	0/1:36,0:34:1.91:113,0,2	0/0:26,0:26:50.91:0,51,630	0/0:34,0:34:99:0,99,1311	0/0:25,0:24:65.33:0,65,755	0/0:16,0:16:34.24:0,34,377	1/1:15,5:20:22.62:310,23,0	1/1:18,5:22:37.12:414,37,0	0/0:23,0:23:57.13:0,57,749	0/0:14,0:14:38.99:0,39,494	0/0:24,0:24:62.93:0,63,774	0/0:23,0:23:31.16:0,31,650	1/1:27,0:25:13.04:133,13,0	1/1:24,0:23:23.04:157,23,0	0/1:10,0:10:26.77:30,0,27	1/1:18,7:22:36.58:531,37,0	0/0:23,0:24:63.89:0,64,732	0/0:18,0:18:26.88:0,27,333	1/1:19,1:21:45.07:533,45,0	1/1:31,0:29:2.90:419,3,0	1/1:33,0:33:21.81:180,22,0	1/1:9,0:9:1.85:150,2,0
chr10	83518397	.	G	GT	1039.09	PASS	AB=0.946;AC=28;AF=0.500;AN=56;BaseQRankSum=9.445;DP=627;FS=1.818;HRun=13;HaplotypeScore=159.3058;InbreedingCoeff=0.3870;MQ=56.34;MQ0=2;MQRankSum=-7.412;QD=2.47;ReadPosRankSum=0.142;VQSLOD=0.5761;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,1:23:14.79:85,15,0	0/0:11,0:11:14.81:0,15,102	0/1:20,0:10:0.14:0,0,17	0/0:25,0:11:3.43:0,3,75	1/1:28,0:28:11.67:64,12,0	0/0:26,0:27:36.18:0,36,226	0/1:12,1:13:1.29:46,0,1	1/1:33,0:33:26.08:122,26,0	0/1:23,1:25:11.12:11,0,80	0/0:31,3:35:2.73:0,3,297	0/0:21,2:23:9.77:0,10,204	0/1:15,0:15:0.05:0,0,126	0/1:20,0:20:0.92:1,0,2	0/1:21,0:20:3.39:3,0,5	0/0:20,1:22:0.72:0,1,142	0/0:13,0:14:19.71:0,20,129	0/0:25,1:26:16.40:0,16,253	0/0:23,0:23:32.25:0,32,221	1/1:22,1:24:20.65:105,21,0	1/1:12,1:23:35.34:163,35,0	1/1:11,0:11:0.47:1,0,0	1/1:25,0:22:4.68:73,5,0	0/1:24,0:24:9.24:9,0,146	0/1:5,15:20:2.52:121,0,3	0/1:20,0:20:8.87:50,0,9	0/1:28,0:26:0.69:78,0,1	1/1:30,2:33:45.85:242,46,0	1/1:6,0:8:6.60:31,7,0
chr10	83518403	.	T	TTG	1539.54	PASS	AB=0.929;AC=11;AF=0.196;AN=56;BaseQRankSum=10.523;DP=614;FS=13.445;HRun=0;HaplotypeScore=159.5144;InbreedingCoeff=0.0035;MQ=57.57;MQ0=2;MQRankSum=-9.398;QD=6.66;ReadPosRankSum=2.189;VQSLOD=2.3616;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,3:23:64.25:95,0,64	0/0:8,0:8:24.06:0,24,299	0/0:20,0:10:18.85:0,19,160	0/0:25,0:12:18.19:0,18,200	0/1:28,0:28:0.83:1,0,225	0/0:23,0:23:69.08:0,69,780	0/1:10,3:13:47.96:137,0,48	0/1:33,1:32:67.22:219,0,67	0/0:22,0:22:59.87:0,60,602	0/0:33,0:33:92.73:0,93,1083	0/0:21,0:20:56.88:0,57,674	0/0:16,0:16:41.56:0,42,458	0/0:19,0:19:22.93:0,23,130	0/0:21,0:20:40.08:0,40,229	0/0:22,0:22:59.94:0,60,659	0/0:15,0:15:39.05:0,39,446	0/0:25,0:25:74.77:0,75,851	0/0:24,0:24:58.83:0,59,674	0/1:19,3:20:23.63:183,0,24	1/1:18,5:22:24.36:387,24,0	0/1:10,0:10:14.54:15,0,57	0/0:25,0:22:54.85:0,55,306	0/0:25,0:25:57.20:0,57,714	0/0:20,0:20:26.14:0,26,191	0/0:19,0:19:28.55:0,29,148	0/1:29,0:27:99:203,0,172	0/1:26,8:34:52.69:436,0,53	0/1:14,0:14:12.99:13,0,190
chr10	83518722	.	CAAA	C	1275.03	PASS	AB=0.600;AC=13;AF=0.232;AN=56;BaseQRankSum=4.358;DP=436;FS=0.571;HRun=16;HaplotypeScore=68.3120;InbreedingCoeff=0.8624;MQ=64.10;MQ0=6;MQRankSum=2.235;QD=10.63;ReadPosRankSum=6.159;VQSLOD=-0.0892;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:23:41.05:246,41,0	0/0:5,0:5:12.04:0,12,192	0/0:25,0:14:23.08:0,23,251	0/0:17,0:10:11.89:0,12,108	0/0:5,1:23:18.08:0,18,72	0/0:14,0:16:36.09:0,36,562	1/1:4,6:14:23.72:199,24,0	1/1:6,20:25:36.41:415,36,0	0/0:11,0:11:24.08:0,24,423	0/0:10,0:13:33.07:0,33,529	0/0:17,0:21:48.11:0,48,716	0/0:14,0:13:27.08:0,27,434	0/1:2,1:6:1.74:26,0,2	0/0:4,0:6:8.49:0,8,65	0/0:11,0:12:27.09:0,27,438	0/0:13,0:21:30.09:0,30,456	0/0:19,0:20:54.18:0,54,899	0/0:20,0:19:42.14:0,42,727	1/1:10,9:20:11.84:186,12,0	1/1:4,10:13:20.82:226,21,0	0/0:10,0:12:30.08:0,30,412	0/0:1,0:8:9.22:0,9,37	0/0:18,0:22:51.17:0,51,810	0/0:8,0:8:12.04:0,12,201	0/0:3,0:5:1.25:0,1,3	0/0:8,0:14:28.26:0,28,338	1/1:5,11:16:14.83:161,15,0	0/0:13,0:19:26.43:0,26,234
chr10	83519214	.	CCT	C	1331.47	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.807;DP=543;FS=39.475;HRun=0;HaplotypeScore=123.9107;InbreedingCoeff=0.9820;MQ=73.97;MQ0=0;MQRankSum=-9.892;QD=26.63;ReadPosRankSum=0.907;VQSLOD=2.2438;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,2376	0/0:7,0:7:21.07:0,21,426	0/0:21,0:21:60.18:0,60,1114	0/0:22,0:21:63.18:0,63,1188	0/0:12,0:12:36.12:0,36,726	0/0:17,0:17:48.16:0,48,974	1/1:0,20:20:42.14:571,42,0	1/1:0,7:7:18.06:241,18,0	0/0:22,0:22:66.23:0,66,1340	0/0:20,0:20:60.21:0,60,1204	0/0:19,0:19:48.11:0,48,851	0/0:19,0:19:57.20:0,57,1142	0/0:22,0:22:66.23:0,66,1281	0/0:22,0:22:54.17:0,54,1014	0/0:24,0:24:60.10:0,60,1207	0/0:19,0:19:57.20:0,57,1158	0/0:50,0:50:99:0,151,2978	0/0:30,0:30:90.27:0,90,1782	1/1:0,6:5:12.04:157,12,0	1/1:0,6:6:12.04:162,12,0	0/0:24,0:24:69.22:0,69,1359	0/0:22,0:22:63.17:0,63,1177	0/0:21,0:21:60.20:0,60,1188	0/0:23,0:23:69.24:0,69,1354	0/0:12,0:12:27.09:0,27,528	0/0:13,0:13:39.09:0,39,751	1/1:0,11:11:29.77:371,30,0	0/0:11,0:11:27.09:0,27,503
chr10	83519401	.	T	TGTG	1414.58	PASS	AB=0.973;AC=7;AF=0.152;AN=46;BaseQRankSum=-2.567;DP=576;FS=23.090;HRun=0;HaplotypeScore=49.6258;InbreedingCoeff=0.7469;MQ=27.74;MQ0=146;MQRankSum=-5.099;QD=14.58;ReadPosRankSum=0.056;VQSLOD=1.0745;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:35,1:16:43.13:43,0,334	0/0:11,0:9:24.08:0,24,409	./.	./.	0/0:18,0:11:12.04:0,12,204	0/0:17,0:9:12.04:0,12,204	./.	1/1:18,2:6:12.04:275,12,0	0/0:27,0:18:18.05:0,18,307	0/0:32,0:14:39.13:0,39,665	0/0:29,0:17:33.11:0,33,558	0/0:22,0:15:21.07:0,21,358	0/0:21,0:12:12.04:0,12,204	0/0:27,0:15:21.07:0,21,358	0/0:27,0:16:26.86:0,27,460	0/0:23,0:13:24.08:0,24,409	0/0:37,0:15:24.08:0,24,409	0/0:32,0:16:30.10:0,30,512	1/1:13,2:4:9.03:177,9,0	1/1:9,17:19:48.12:1055,48,0	./.	0/0:23,0:15:21.07:0,21,358	0/0:31,0:20:27.08:0,27,460	0/0:25,0:17:21.07:0,21,345	0/0:22,0:15:21.07:0,21,358	0/0:13,0:9:21.07:0,21,358	./.	0/0:13,0:7:9.03:0,9,153
chr10	83520284	.	ACAAAAAAC	A	1539.38	PASS	AB=0.967;AC=17;AF=0.304;AN=56;BaseQRankSum=4.512;DP=391;FS=0.750;HRun=0;HaplotypeScore=97.0583;InbreedingCoeff=0.6734;MQ=60.34;MQ0=3;MQRankSum=-7.898;QD=12.32;ReadPosRankSum=-4.275;VQSLOD=0.7800;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:14:29.01:234,29,0	0/0:8,0:8:24.08:0,24,813	0/0:13,0:8:11.41:0,11,321	0/0:13,0:7:8.22:0,8,510	1/1:5,2:9:20.73:226,21,0	0/0:10,0:10:30.09:0,30,1124	0/0:7,0:7:15.49:0,15,632	0/1:10,0:10:11.77:12,0,450	0/0:13,0:13:39.13:0,39,1446	0/0:30,0:30:90.24:0,90,3464	0/0:14,0:14:42.14:0,42,1649	0/0:22,0:22:66.19:0,66,2354	1/1:0,16:15:11.76:356,12,0	1/1:0,15:15:8.55:199,9,0	0/0:20,0:20:57.20:0,57,2123	0/0:8,0:8:24.08:0,24,1002	0/0:19,0:19:51.17:0,51,1880	0/0:18,0:18:54.18:0,54,1981	0/1:15,0:15:21.45:21,0,765	0/0:15,0:14:24.90:0,25,517	1/1:0,0:6:2.98:21,3,0	1/1:0,8:8:17.98:398,18,0	0/0:23,0:23:68.26:0,68,2662	0/0:13,0:12:16.18:0,16,1326	1/1:1,12:12:11.95:202,12,0	0/1:16,0:18:61.15:61,0,680	0/0:11,0:12:24.97:0,25,542	0/0:6,0:6:18.06:0,18,432
chr10	83520665	.	A	AGC	9829.80	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=18.761;DP=724;FS=7.813;HRun=0;HaplotypeScore=127.9738;InbreedingCoeff=0.9713;MQ=55.18;MQ0=0;MQRankSum=-3.255;QD=28.33;ReadPosRankSum=2.016;VQSLOD=6.5369;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,27:33:20.70:716,21,0	0/0:18,0:18:54.18:0,54,878	0/0:31,0:24:63.17:0,63,975	0/0:25,0:25:69.21:0,69,1096	1/1:5,27:32:47.22:716,47,0	0/0:17,0:17:51.14:0,51,802	1/1:7,27:34:50.59:1046,51,0	1/1:8,21:29:30.35:906,30,0	0/0:28,0:28:78.27:0,78,1267	0/0:33,0:33:99:0,99,1612	0/0:27,0:27:78.22:0,78,1179	0/0:21,0:21:63.20:0,63,994	1/1:4,21:25:54.04:729,54,0	1/1:1,21:25:29.65:621,30,0	0/0:29,0:29:87.30:0,87,1419	0/0:39,0:39:99:0,117,1885	0/0:32,0:32:96.33:0,96,1560	0/0:23,0:23:66.20:0,66,1045	1/1:1,8:8:3.53:285,4,0	1/1:6,22:30:14.03:625,14,0	1/1:7,14:21:15.79:625,16,0	1/1:2,30:33:73.97:1041,74,0	0/0:30,0:30:90.31:0,90,1461	0/0:24,0:24:72.20:0,72,1137	1/1:0,12:12:30.10:403,30,0	1/1:5,23:28:19.68:1013,20,0	1/1:2,24:26:46.64:814,47,0	1/1:1,7:8:21.07:290,21,0
chr10	83520666	.	A	AG	6870.44	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=18.779;DP=727;FS=11.549;HRun=0;HaplotypeScore=124.4466;InbreedingCoeff=0.9989;MQ=55.20;MQ0=0;MQRankSum=-6.989;QD=19.80;ReadPosRankSum=0.723;VQSLOD=6.2066;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:32:41.09:465,41,0	0/0:19,0:19:54.17:0,54,736	0/0:30,0:23:66.06:0,66,852	0/0:25,0:25:69.07:0,69,917	1/1:5,27:32:42.51:466,43,0	0/0:17,0:17:51.10:0,51,673	1/1:7,27:34:79.52:738,80,0	1/1:8,21:29:68.97:644,69,0	0/0:28,0:28:81.25:0,81,1115	0/0:36,0:36:99:0,99,1362	0/0:28,0:28:75.21:0,75,993	0/0:21,0:21:63.19:0,63,846	1/1:4,21:25:53.83:495,54,0	1/1:4,21:25:47.67:457,48,0	0/0:29,0:29:87.29:0,87,1215	0/0:38,0:38:99:0,114,1575	0/0:32,0:32:96.32:0,96,1339	0/0:23,0:23:63.21:0,63,880	1/1:2,8:9:24.02:236,24,0	1/1:9,22:30:47.39:492,47,0	1/1:7,14:21:50.50:478,51,0	1/1:3,30:33:65.64:706,66,0	0/0:30,0:30:90.27:0,90,1222	0/0:24,0:24:69.23:0,69,964	1/1:0,12:12:29.99:273,30,0	1/1:5,23:28:27.57:644,28,0	1/1:2,24:26:62.89:576,63,0	1/1:1,7:8:21.02:201,21,0
chr10	83521456	.	AT	A	2538.16	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.725;DP=530;FS=1.263;HRun=2;HaplotypeScore=70.2743;InbreedingCoeff=0.9782;MQ=79.58;MQ0=2;MQRankSum=-0.285;QD=18.13;ReadPosRankSum=-0.480;VQSLOD=3.5491;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:46.66:0,47,273	0/0:7,0:7:8.17:0,8,153	0/0:21,0:18:26.82:0,27,228	0/0:14,0:14:10.65:0,11,170	0/0:19,0:19:47.96:0,48,568	0/0:24,0:24:63.39:0,63,842	1/1:19,0:19:44.93:375,45,0	1/1:16,3:19:53.77:476,54,0	0/0:12,0:12:36.02:0,36,396	0/0:22,0:22:65.37:0,65,814	0/0:13,0:13:39.07:0,39,492	0/0:14,0:14:42.07:0,42,507	0/0:19,0:19:49.05:0,49,524	0/0:21,0:21:53.79:0,54,691	0/0:15,0:15:39.99:0,40,517	0/0:12,0:12:34.29:0,34,411	0/0:32,0:32:93.86:0,94,1273	0/0:18,0:18:54.09:0,54,655	1/1:16,1:17:44.78:377,45,0	1/1:24,0:24:62.60:476,63,0	0/0:17,0:17:43.85:0,44,426	0/0:12,0:12:30.92:0,31,364	0/0:20,0:20:60.17:0,60,816	0/0:24,0:24:68.63:0,69,837	0/0:20,0:20:58.35:0,58,732	1/1:23,0:22:65.40:513,65,0	1/1:27,0:25:44.69:367,45,0	1/1:10,0:10:17.98:152,18,0
chr10	83521457	.	TTA	T	4306.62	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.960;DP=531;FS=0.386;HRun=0;HaplotypeScore=74.0211;InbreedingCoeff=0.9955;MQ=77.87;MQ0=2;MQRankSum=-0.141;QD=31.21;ReadPosRankSum=-0.085;VQSLOD=6.0977;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:92.35:0,92,765	0/0:7,0:7:19.98:0,20,257	0/0:17,0:15:24.17:0,24,243	0/0:15,0:14:17.73:0,18,238	0/0:19,0:19:54.55:0,55,777	0/0:22,0:22:66.18:0,66,1172	1/1:0,16:19:45.14:655,45,0	1/1:4,15:19:52.34:609,52,0	0/0:12,0:12:36.03:0,36,491	0/0:22,0:22:66.18:0,66,1078	0/0:13,0:13:39.11:0,39,670	0/0:15,0:15:43.34:0,43,672	0/0:18,0:19:51.05:0,51,728	0/0:21,0:21:57.61:0,58,923	0/0:15,0:15:42.09:0,42,689	0/0:12,0:12:36.07:0,36,559	0/0:33,0:33:89.01:0,89,1713	0/0:18,0:18:54.11:0,54,872	1/1:1,15:16:47.53:565,48,0	1/1:0,22:24:62.69:723,63,0	0/0:18,0:18:45.05:0,45,582	0/0:14,0:14:36.04:0,36,530	0/0:20,0:20:60.18:0,60,1090	0/0:24,0:24:72.16:0,72,1152	0/0:21,0:21:60.14:0,60,987	1/1:0,22:23:65.80:869,66,0	1/1:0,23:24:44.97:619,45,0	1/1:0,9:10:18.06:267,18,0
chr10	83521458	.	TA	T	1101.95	PASS	AB=0.849;AC=18;AF=0.321;AN=56;BaseQRankSum=11.659;DP=545;FS=3.637;HRun=13;HaplotypeScore=77.8122;InbreedingCoeff=0.7472;MQ=76.67;MQ0=2;MQRankSum=-1.707;QD=5.62;ReadPosRankSum=1.238;VQSLOD=2.6119;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,27:34:53.49:522,53,0	0/1:6,1:7:17.66:18,0,89	0/0:16,0:14:6.88:0,7,61	0/0:16,0:14:15.54:0,16,130	0/0:18,0:18:33.49:0,33,308	0/0:22,1:23:38.17:0,38,525	1/1:19,0:19:35.74:126,36,0	1/1:21,0:20:34.20:125,34,0	0/0:12,0:12:15.02:0,15,146	0/0:21,1:24:25.83:0,26,383	0/0:14,0:14:30.04:0,30,287	0/0:16,0:16:25.26:0,25,227	0/0:18,1:20:6.53:0,7,201	0/0:20,0:21:42.73:0,43,371	0/0:14,2:16:10.82:0,11,252	0/0:12,1:13:2.13:0,2,183	0/0:32,1:33:58.33:0,58,743	0/0:19,0:21:35.73:0,36,320	1/1:16,0:16:23.20:98,23,0	1/1:24,0:24:29.14:104,29,0	0/0:7,1:18:6.83:0,7,121	0/1:11,3:14:13.92:14,0,180	0/0:20,1:21:53.45:0,53,504	0/0:24,0:24:30.19:0,30,410	0/0:19,1:22:7.57:0,8,342	1/1:24,0:23:37.49:134,37,0	1/1:26,0:24:31.51:114,32,0	1/1:10,0:10:14.42:51,14,0
chr10	83521713	.	CCA	C	5081.09	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.244;DP=504;FS=3.983;HRun=0;HaplotypeScore=65.5920;InbreedingCoeff=0.9939;MQ=75.68;MQ0=0;MQRankSum=-1.573;QD=37.64;ReadPosRankSum=3.163;VQSLOD=7.1679;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:69.23:966,69,0	0/0:4,0:4:12.04:0,12,216	0/0:22,0:21:57.17:0,57,940	0/0:25,0:25:69.10:0,69,1194	1/1:0,17:17:51.17:714,51,0	0/0:16,0:16:42.14:0,42,756	0/0:20,0:20:57.20:0,57,1020	0/0:28,0:28:81.28:0,81,1444	0/0:22,0:22:63.20:0,63,1105	0/0:11,0:11:33.10:0,33,564	0/0:12,0:12:36.12:0,36,635	0/0:14,0:14:39.13:0,39,702	1/1:1,17:18:51.17:714,51,0	1/1:0,15:15:45.15:630,45,0	0/0:18,0:18:51.17:0,51,900	0/0:11,0:11:33.11:0,33,594	0/0:19,0:19:54.18:0,54,961	0/0:18,0:18:54.12:0,54,907	0/0:20,0:20:60.19:0,60,1051	0/0:23,0:23:69.21:0,69,1175	1/1:1,16:17:45.15:630,45,0	1/1:0,17:17:48.16:672,48,0	0/0:12,0:12:33.11:0,33,593	0/0:17,0:17:51.17:0,51,918	1/1:1,22:23:54.18:756,54,0	0/0:23,0:23:69.22:0,69,1181	0/0:26,0:26:75.26:0,75,1337	0/0:8,0:8:24.08:0,24,422
chr10	83521903	.	CTCTG	C	3833.91	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=10.257;DP=387;FS=8.203;HRun=0;HaplotypeScore=92.1890;InbreedingCoeff=0.8029;MQ=98.20;MQ0=0;MQRankSum=-5.541;QD=23.38;ReadPosRankSum=0.212;VQSLOD=2.2360;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,17:29:57.11:951,57,0	0/0:7,0:7:15.05:0,15,381	0/0:37,0:34:53.16:0,53,1562	0/1:51,0:46:28.23:28,0,1050	1/1:2,7:9:9.03:162,9,0	0/0:6,0:6:15.05:0,15,390	0/0:18,0:18:51.17:0,51,1239	0/0:19,0:19:45.15:0,45,1093	0/0:5,0:5:15.05:0,15,379	0/0:4,0:4:9.03:0,9,234	0/0:3,0:3:6.02:0,6,156	0/0:3,0:3:6.02:0,6,156	1/1:6,3:9:18.06:317,18,0	1/1:2,8:10:24.07:397,24,0	0/0:12,0:12:33.11:0,33,844	0/0:6,0:6:12.01:0,12,255	0/0:15,0:15:42.10:0,42,960	0/0:6,0:6:12.04:0,12,312	0/0:19,0:19:51.17:0,51,1210	0/0:15,0:15:39.12:0,39,954	1/1:3,19:22:36.12:647,36,0	1/1:4,15:19:39.09:692,39,0	0/0:2,0:2:6:0,6,102	0/0:10,0:10:30.10:0,30,766	1/1:2,13:15:36.12:640,36,0	0/0:16,0:16:48.13:0,48,1188	0/0:18,0:18:51.18:0,51,1302	0/0:2,0:2:6.02:0,6,156
chr10	83521943	.	CT	C	305.95	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=0.916;DP=263;FS=0.000;HRun=3;HaplotypeScore=59.8734;InbreedingCoeff=0.7374;MQ=84.19;MQ0=0;MQRankSum=0.071;QD=5.56;ReadPosRankSum=-0.368;VQSLOD=0.1121;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,1:19:40.59:0,41,278	0/0:2,0:2:5.99:0,6,49	0/0:26,0:22:28.73:0,29,383	0/0:20,0:19:28.71:0,29,280	./.	0/0:8,0:8:17.97:0,18,161	0/0:14,1:15:41.82:0,42,352	0/0:9,0:9:14.89:0,15,106	0/0:4,0:4:6:0,6,62	0/0:4,0:4:5.97:0,6,49	0/0:1,0:1:2.96:0,3,19	0/0:3,0:3:6.01:0,6,62	1/1:4,1:5:11.91:88,12,0	1/1:9,1:10:12.85:89,13,0	0/0:7,0:7:14.74:0,15,136	0/0:4,0:4:9.03:0,9,111	0/0:11,0:11:30.03:0,30,320	0/0:3,0:3:6.01:0,6,71	0/0:17,0:17:33.90:0,34,250	0/0:12,0:12:20.65:0,21,162	1/1:10,3:13:5.96:45,6,0	1/1:14,1:15:17.92:142,18,0	./.	0/0:10,0:10:9.01:0,9,91	1/1:12,0:12:14.79:98,15,0	0/0:9,0:9:15.02:0,15,164	0/0:19,0:18:48.50:0,48,335	0/0:1,0:1:3.01:0,3,42
chr10	83521959	.	CG	C	1342.42	PASS	AB=0.962;AC=37;AF=0.712;AN=52;BaseQRankSum=4.115;DP=204;FS=4.327;HRun=1;HaplotypeScore=40.7502;InbreedingCoeff=0.0376;MQ=87.21;MQ0=0;MQRankSum=-4.423;QD=7.34;ReadPosRankSum=1.176;VQSLOD=0.8339;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:23.26:145,23,0	0/1:3,0:3:15.69:33,0,16	0/1:19,3:20:43.43:43,0,164	0/1:10,4:14:93.33:93,0,103	1/1:3,1:4:5.92:42,6,0	1/1:4,0:4:4.67:23,5,0	1/1:13,0:13:17.90:137,18,0	1/1:4,0:4:6:55,6,0	1/1:3,0:3:0.89:2,1,0	0/1:7,0:7:3.99:4,0,79	0/0:2,1:3:5.90:0,6,46	0/0:6,0:6:12.23:0,12,81	1/1:5,0:5:9:77,9,0	1/1:10,0:10:12.39:94,12,0	0/1:8,0:8:10.57:19,0,11	0/0:8,0:8:0.38:0,0,116	0/1:13,0:13:28.93:29,0,111	0/1:5,0:5:12.58:13,0,42	1/1:8,0:8:23.57:160,24,0	1/1:8,0:8:14.58:99,15,0	1/1:9,0:9:12.36:85,12,0	1/1:4,0:4:8.82:69,9,0	./.	0/1:6,0:6:16.38:16,0,33	1/1:2,0:2:3.43:20,3,0	0/1:8,0:8:26.18:43,0,26	1/1:13,0:12:32.52:196,33,0	./.
chr10	83522056	.	CTTTT	C	5511.59	PASS	AB=0.719;AC=25;AF=0.446;AN=56;BaseQRankSum=14.521;DP=491;FS=0.000;HRun=13;HaplotypeScore=145.3774;InbreedingCoeff=0.7531;MQ=56.39;MQ0=1;MQRankSum=-12.656;QD=18.81;ReadPosRankSum=2.477;VQSLOD=2.6905;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,18:29:47.99:694,48,0	0/0:3,0:5:12.04:0,12,219	0/0:12,0:6:3.09:0,3,165	0/1:9,0:7:28.01:28,0,88	0/1:10,0:30:13.41:43,0,13	0/0:14,0:14:33.11:0,33,704	1/1:6,15:22:51.07:688,51,0	1/1:9,24:33:66.13:964,66,0	0/0:8,0:9:24.08:0,24,476	0/0:22,0:25:66.21:0,66,1368	0/0:9,0:12:33.11:0,33,716	0/0:5,0:5:15.04:0,15,302	0/1:3,0:15:7.79:20,0,8	1/1:12,0:19:7.31:21,7,0	0/0:13,0:13:33.11:0,33,742	0/0:13,0:16:42.05:0,42,848	0/0:19,0:25:60.20:0,60,1280	0/0:10,0:12:36.12:0,36,808	1/1:9,17:25:51.01:746,51,0	1/1:2,13:15:33.04:474,33,0	0/0:4,0:12:23.54:0,24,163	1/1:6,0:23:23.23:62,23,0	0/0:19,0:19:51.16:0,51,1091	0/0:18,0:19:51.17:0,51,1153	1/1:4,0:19:16.06:43,16,0	1/1:5,15:20:45.05:658,45,0	1/1:6,19:25:54.08:766,54,0	1/1:0,7:7:21.07:307,21,0
chr10	83522089	.	A	AACTC	19011.44	PASS	AB=0.536;AC=27;AF=0.482;AN=56;BaseQRankSum=7.235;DP=499;FS=7.775;HRun=0;HaplotypeScore=122.6191;InbreedingCoeff=0.9108;MQ=58.63;MQ0=0;MQRankSum=-13.877;QD=60.16;ReadPosRankSum=-0.910;VQSLOD=6.3288;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:31:75.26:1946,75,0	0/0:6,0:6:18.06:0,18,322	0/0:14,0:13:7.18:0,7,386	0/0:5,0:4:12.01:0,12,159	1/1:5,33:38:90.27:2240,90,0	0/0:14,0:14:42.14:0,42,765	1/1:9,18:29:63.22:1630,63,0	1/1:17,7:24:45.02:1110,45,0	0/0:8,0:8:24.08:0,24,436	0/0:18,0:18:51.17:0,51,939	0/0:8,0:8:21.07:0,21,386	0/0:9,0:9:24.08:0,24,442	1/1:2,15:17:45.15:1142,45,0	0/1:2,11:15:20.79:745,0,21	0/0:13,0:13:39.10:0,39,656	0/0:20,0:20:57.20:0,57,1049	0/0:21,0:21:54.19:0,54,993	0/0:14,0:14:42.14:0,42,773	1/1:13,10:23:39.07:904,39,0	1/1:4,16:21:48.16:1256,48,0	1/1:3,15:19:42.14:1097,42,0	1/1:1,30:32:93.32:2417,93,0	0/0:13,0:13:36.12:0,36,662	0/0:19,0:19:57.20:0,57,1049	1/1:1,14:15:42.14:1105,42,0	1/1:2,20:24:69.17:1701,69,0	1/1:5,13:18:42.14:1098,42,0	1/1:2,7:9:24.08:620,24,0
chr10	83522432	.	G	GT	4431.15	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=6.891;DP=687;FS=0.357;HRun=5;HaplotypeScore=122.4562;InbreedingCoeff=0.9921;MQ=69.47;MQ0=2;MQRankSum=-4.833;QD=27.87;ReadPosRankSum=-2.817;VQSLOD=2.4966;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:31.39:0,31,73	0/0:8,0:8:21.06:0,21,238	0/0:30,0:24:43.62:0,44,484	0/0:31,0:25:24.49:0,24,529	0/0:31,0:31:34.38:0,34,82	0/0:27,0:27:78.22:0,78,884	1/1:8,11:19:45.10:565,45,0	1/1:17,9:26:66.25:687,66,0	0/0:25,0:25:72.19:0,72,806	0/0:36,0:36:99:0,102,1137	0/0:11,0:11:30.08:0,30,338	0/0:26,0:26:78.21:0,78,874	0/0:30,0:30:41.71:0,42,106	0/0:22,0:22:28.26:0,28,79	0/0:29,0:29:84.24:0,84,952	0/0:36,0:36:99:0,105,1191	0/0:20,0:20:60.17:0,60,679	0/0:14,0:14:36.10:0,36,408	1/1:16,8:23:56.86:605,57,0	1/1:8,12:20:49.35:599,49,0	0/0:25,0:25:30.63:0,31,86	0/0:28,0:27:23.30:0,23,58	0/0:22,0:22:54.14:0,54,603	0/0:24,0:24:69.20:0,69,782	0/0:25,0:25:32.46:0,32,86	1/1:9,15:24:26.02:642,26,0	1/1:15,26:41:96.18:1183,96,0	1/1:2,3:5:12.04:150,12,0
chr10	83522433	.	TTTTG	T	1323.34	PASS	AB=0.792;AC=7;AF=0.125;AN=56;BaseQRankSum=1.059;DP=688;FS=1.121;HRun=0;HaplotypeScore=168.9722;InbreedingCoeff=-0.1431;MQ=71.38;MQ0=2;MQRankSum=-1.956;QD=8.54;ReadPosRankSum=-8.006;VQSLOD=-0.6161;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:60.58:0,61,381	0/0:8,0:8:21.07:0,21,538	0/0:32,0:27:47.83:0,48,984	0/0:31,0:25:43.56:0,44,1300	0/0:31,0:31:50.43:0,50,419	0/0:27,0:27:78.26:0,78,1958	0/1:15,4:19:70.81:71,0,302	0/1:12,12:24:99:508,0,168	0/0:26,0:26:78.24:0,78,1755	0/0:36,0:36:99:0,108,2497	0/0:11,0:11:30.10:0,30,710	0/0:27,0:27:81.26:0,81,1926	0/0:30,0:30:74.45:0,74,432	0/0:22,0:22:58.36:0,58,389	0/0:29,0:29:87.28:0,87,2034	0/0:36,0:36:99:0,105,2625	0/0:20,0:20:60.17:0,60,1441	0/0:14,0:14:36.12:0,36,858	0/1:11,12:22:90.99:463,0,91	0/1:15,5:20:99:128,0,249	0/0:25,0:25:52.73:0,53,383	0/0:28,0:27:50.18:0,50,329	0/0:22,0:22:56.85:0,57,1271	0/0:24,0:24:69.22:0,69,1641	0/0:26,0:26:46.17:0,46,442	0/1:18,5:23:99:137,0,305	0/1:28,12:41:99:103,0,543	0/1:5,0:5:44.83:45,0,69
chr10	83522435	.	TTG	T	2270.55	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=16.831;DP=687;FS=7.447;HRun=0;HaplotypeScore=139.2144;InbreedingCoeff=0.6257;MQ=74.46;MQ0=2;MQRankSum=-2.639;QD=6.62;ReadPosRankSum=-0.165;VQSLOD=2.8219;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:57.39:226,57,0	0/0:7,0:7:21.07:0,21,363	0/0:33,0:28:40.70:0,41,842	0/0:33,0:28:54.94:0,55,958	1/1:30,1:31:69.81:372,70,0	0/0:27,0:27:78.26:0,78,1337	0/1:18,0:18:30.65:31,0,47	1/1:24,0:24:1.49:229,1,0	0/0:26,0:26:78.25:0,78,1276	0/0:36,0:36:99:0,108,1774	0/0:11,0:11:30.10:0,30,507	0/0:27,0:27:81.24:0,81,1315	1/1:30,1:31:70.14:299,70,0	1/1:21,1:22:36.65:226,37,0	0/0:30,0:30:90.26:0,90,1448	0/0:35,0:35:99:0,105,1788	0/0:22,0:22:66.16:0,66,1043	0/0:13,0:13:36.10:0,36,593	1/1:22,0:21:39.64:250,40,0	0/1:20,0:20:15.57:55,0,16	1/1:23,0:23:11.73:122,12,0	1/1:26,0:25:40.90:155,41,0	0/0:20,0:20:56.86:0,57,914	0/0:24,0:24:72.22:0,72,1189	1/1:26,1:27:49.61:307,50,0	0/1:24,0:24:32.32:97,0,32	0/1:41,0:41:50.59:70,0,51	0/1:6,0:6:1.96:38,0,2
chr10	83522436	.	TG	T	7700.29	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=17.347;DP=693;FS=8.971;HRun=1;HaplotypeScore=108.6387;InbreedingCoeff=0.9921;MQ=74.96;MQ0=2;MQRankSum=-6.188;QD=22.52;ReadPosRankSum=0.246;VQSLOD=4.0208;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:66.18:897,66,0	0/0:7,0:7:21.07:0,21,286	0/0:33,1:29:39.28:0,39,657	0/0:32,1:28:55.65:0,56,732	1/1:1,30:31:83.86:969,84,0	0/0:27,0:27:78.24:0,78,1042	1/1:18,0:18:20.27:140,20,0	1/1:23,1:24:47.88:307,48,0	0/0:26,0:26:78.20:0,78,995	0/0:38,0:38:99:0,111,1457	0/0:12,0:12:33.10:0,33,430	0/0:27,0:27:81.21:0,81,1039	1/1:1,30:31:81.23:1097,81,0	1/1:5,17:22:57.93:784,58,0	0/0:32,0:32:96.23:0,96,1209	0/0:35,0:35:99:0,105,1413	0/0:22,0:22:66.14:0,66,828	0/0:13,0:13:36.09:0,36,471	1/1:22,0:21:53.47:304,53,0	1/1:19,1:20:34.31:195,34,0	1/1:3,20:23:43.73:662,44,0	1/1:0,26:25:57.05:725,57,0	0/0:20,0:20:56.79:0,57,705	0/0:25,0:25:75.18:0,75,967	1/1:9,18:27:76.40:929,76,0	1/1:22,1:23:12.14:241,12,0	1/1:41,0:41:61.73:357,62,0	1/1:6,0:6:14.50:91,14,0
chr10	83522437	.	G	GT	3076.76	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.498;DP=705;FS=0.777;HRun=7;HaplotypeScore=126.8358;InbreedingCoeff=0.9600;MQ=75.23;MQ0=2;MQRankSum=-5.693;QD=19.11;ReadPosRankSum=-1.879;VQSLOD=1.8847;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:32.65:0,33,84	0/0:7,0:7:21.03:0,21,203	0/0:34,0:29:54.37:0,54,575	0/0:34,0:29:53.17:0,53,605	0/0:31,0:31:33.13:0,33,88	0/0:27,0:27:75.04:0,75,707	1/1:10,9:19:34.49:334,34,0	1/1:19,8:27:57.70:510,58,0	0/0:26,0:26:72.10:0,72,689	0/0:38,0:38:98.87:0,99,928	0/0:12,0:12:33.04:0,33,313	0/0:27,0:27:75.11:0,75,724	0/0:32,0:32:42.41:0,42,110	0/0:23,0:23:31.04:0,31,88	0/0:33,0:33:87.07:0,87,818	0/0:35,0:35:99:0,99,956	0/0:22,0:22:60.07:0,60,572	0/0:13,0:13:33.05:0,33,319	1/1:15,8:22:47.66:449,48,0	1/1:11,11:22:42.07:451,42,0	0/0:23,0:23:30.63:0,31,94	0/0:26,0:25:25.32:0,25,66	0/0:20,0:20:51.08:0,51,492	0/0:25,0:25:72.07:0,72,686	0/0:27,0:27:33.09:0,33,94	1/1:8,15:23:2.38:512,2,0	1/1:16,24:41:87.17:869,87,0	1/1:3,3:6:15:142,15,0
chr10	83522865	.	A	AG	1094.59	PASS	AB=0.567;AC=12;AF=0.214;AN=56;BaseQRankSum=-2.968;DP=503;FS=0.000;HRun=0;HaplotypeScore=74.6183;InbreedingCoeff=0.7172;MQ=65.14;MQ0=8;MQRankSum=1.131;QD=9.60;ReadPosRankSum=2.200;VQSLOD=3.3556;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:88.52:0,89,687	0/0:7,0:7:20.22:0,20,173	0/0:35,0:16:33.50:0,33,252	0/0:24,0:9:20.37:0,20,132	0/0:11,0:11:26.25:0,26,185	0/0:17,0:17:47.87:0,48,457	1/1:2,1:22:3.08:99,3,0	1/1:3,0:14:29.99:200,30,0	0/0:10,0:10:26.95:0,27,261	0/0:14,0:14:41.85:0,42,345	0/0:19,0:19:38.60:0,39,348	0/0:18,0:18:45.18:0,45,389	0/0:13,0:13:17.59:0,18,137	0/0:17,0:17:43.65:0,44,315	0/0:17,0:17:44.97:0,45,436	0/0:12,0:12:29.20:0,29,256	0/0:37,0:37:87.13:0,87,727	0/0:29,0:28:73.90:0,74,646	1/1:12,6:20:35.14:391,35,0	1/1:2,9:13:22.32:209,22,0	0/0:13,0:13:31.62:0,32,207	0/0:10,0:9:2.21:0,2,125	0/0:12,0:11:24.85:0,25,189	0/0:22,0:21:53.88:0,54,494	0/0:12,0:12:26.43:0,26,187	0/1:9,14:26:27.50:286,0,28	0/1:2,14:15:1.68:57,0,2	1/1:0,0:2:2.92:17,3,0
chr10	83523985	.	G	GTA	1874.21	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.417;DP=522;FS=3.113;HRun=0;HaplotypeScore=74.7444;InbreedingCoeff=0.9058;MQ=94.20;MQ0=0;MQRankSum=-2.418;QD=41.65;ReadPosRankSum=2.917;VQSLOD=5.6998;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,42:45:99:1969,111,0	0/0:3,0:3:9.03:0,9,124	0/0:23,0:23:45.09:0,45,567	0/0:26,0:26:57.15:0,57,748	0/0:14,0:14:39.13:0,39,535	0/0:16,0:16:33.02:0,33,429	0/0:23,0:23:66.18:0,66,871	0/0:25,0:25:72.19:0,72,952	0/0:22,0:22:60.17:0,60,787	0/0:15,0:15:45.14:0,45,602	0/0:16,0:16:39.13:0,39,536	0/0:24,0:24:63.16:0,63,815	0/0:15,0:15:42.14:0,42,575	0/0:16,0:16:42.14:0,42,572	0/0:15,0:15:42.12:0,42,560	0/0:11,0:11:30.10:0,30,412	0/0:24,0:24:63.21:0,63,866	0/0:19,0:19:54.18:0,54,732	0/0:17,0:17:48.06:0,48,602	0/0:5,0:5:12.04:0,12,163	0/0:47,0:47:99:0,123,1638	0/0:18,0:18:45.15:0,45,618	0/0:9,0:9:18.06:0,18,247	0/0:29,0:29:87.23:0,87,1156	0/0:10,0:10:27.07:0,27,353	0/0:15,0:15:45.15:0,45,618	0/0:12,0:11:27.09:0,27,363	0/0:8,0:8:21.07:0,21,286
chr10	83526076	.	T	TAAAAAA	1807.40	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=5.724;DP=442;FS=4.545;HRun=11;HaplotypeScore=108.4814;InbreedingCoeff=0.8518;MQ=70.66;MQ0=1;MQRankSum=-5.064;QD=27.38;ReadPosRankSum=-5.750;VQSLOD=0.4139;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:36:68.74:0,69,481	0/0:10,0:11:23.95:0,24,394	0/0:14,0:12:15.15:0,15,312	0/1:11,0:10:57.74:58,0,142	1/1:6,2:9:18.06:465,18,0	0/0:19,0:22:44.67:0,45,711	0/0:16,0:20:41.72:0,42,603	0/0:30,0:31:21.83:0,22,740	0/0:14,0:14:35.98:0,36,629	0/0:12,0:12:26.95:0,27,467	0/0:10,0:10:20.92:0,21,366	0/0:7,0:8:17.96:0,18,294	1/1:7,2:9:11.07:243,11,0	1/1:7,1:9:15.05:374,15,0	0/0:15,0:17:35.82:0,36,563	0/0:9,0:11:17.68:0,18,259	0/0:29,0:30:83.96:0,84,1420	0/0:26,0:26:47.41:0,47,722	0/0:21,0:21:29.80:0,30,471	0/0:12,0:13:26.93:0,27,448	0/0:17,0:20:41.56:0,42,658	1/1:7,0:11:21.07:440,21,0	0/0:9,0:9:14.76:0,15,262	0/0:18,0:18:51.10:0,51,860	1/1:9,4:16:17.09:402,17,0	0/0:14,0:14:36:0,36,628	0/0:9,0:9:14.89:0,15,233	0/0:10,0:10:17.89:0,18,314
chr10	83526220	.	A	AT	1275.59	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-4.121;DP=492;FS=4.467;HRun=10;HaplotypeScore=52.7504;InbreedingCoeff=0.8250;MQ=77.49;MQ0=1;MQRankSum=0.802;QD=16.57;ReadPosRankSum=-0.501;VQSLOD=3.8534;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:31:50.92:0,51,147	0/0:7,0:7:14.98:0,15,123	0/1:14,0:9:16.73:19,0,17	0/0:23,0:17:21.35:0,21,118	1/1:5,14:19:14.39:345,14,0	0/0:25,0:25:68.87:0,69,560	0/0:16,0:16:35.94:0,36,296	0/0:30,0:30:68.83:0,69,553	0/0:24,0:24:65.88:0,66,535	0/0:19,0:19:38.90:0,39,317	0/0:13,0:13:29.96:0,30,246	0/0:7,0:7:20.96:0,21,169	1/1:2,11:13:21.05:224,21,0	1/1:0,15:15:39.10:416,39,0	0/0:17,0:17:44.92:0,45,366	0/0:12,1:13:0.97:0,1,214	0/0:33,0:33:95.84:0,96,780	0/0:21,0:21:50.83:0,51,410	0/0:30,0:30:53.71:0,54,437	0/0:11,0:11:29.96:0,30,246	0/0:12,0:12:26.95:0,27,222	1/1:0,5:5:15.04:158,15,0	0/0:5,0:5:11.96:0,12,96	0/0:18,0:18:50.93:0,51,416	1/1:2,9:10:27.07:288,27,0	0/0:20,0:20:47.91:0,48,390	0/0:22,0:22:47.88:0,48,386	0/0:18,0:18:53.92:0,54,440
chr10	83527308	.	GC	G	1792.07	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.159;DP=668;FS=1.910;HRun=1;HaplotypeScore=67.1669;InbreedingCoeff=0.8956;MQ=79.65;MQ0=0;MQRankSum=-1.120;QD=35.14;ReadPosRankSum=2.034;VQSLOD=3.8660;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,51:51:99:1887,135,0	0/0:2,0:2:6.02:0,6,94	0/0:13,0:13:36.05:0,36,506	0/0:18,0:18:51.14:0,51,754	0/0:8,0:8:21.05:0,21,311	0/0:22,0:22:66.19:0,66,1000	0/0:45,0:45:99:0,135,2131	0/0:29,0:29:87.28:0,87,1335	0/0:23,0:23:69.24:0,69,1096	0/0:15,0:15:45.14:0,45,677	0/0:8,0:8:24.08:0,24,377	0/0:24,0:24:72.25:0,72,1148	0/0:25,0:25:75.26:0,75,1192	0/0:33,0:33:99:0,99,1583	0/0:15,0:15:42.13:0,42,648	0/0:19,0:19:57.19:0,57,911	0/0:36,0:36:99:0,108,1726	0/0:35,0:35:99:0,105,1673	0/0:22,0:22:63.21:0,63,994	0/0:9,0:9:21.06:0,21,312	0/0:77,0:77:99:0,232,3631	0/0:17,0:17:42.13:0,42,633	0/0:9,0:9:27.05:0,27,401	0/0:42,0:42:99:0,126,1944	0/0:18,0:18:51.16:0,51,792	0/0:23,0:23:66.22:0,66,1033	0/0:20,0:20:57.19:0,57,911	0/0:10,0:10:30.10:0,30,480
chr10	83527428	.	GT	G	1608.01	PASS	AB=0.971;AC=22;AF=0.393;AN=56;BaseQRankSum=16.735;DP=651;FS=3.092;HRun=1;HaplotypeScore=92.8883;InbreedingCoeff=0.5155;MQ=76.84;MQ0=0;MQRankSum=-1.645;QD=4.57;ReadPosRankSum=2.504;VQSLOD=0.8124;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:50.92:112,0,51	0/0:5,0:5:11.89:0,12,140	0/0:19,0:19:42.67:0,43,475	0/0:17,0:17:35.01:0,35,398	0/1:18,2:20:9.83:103,0,10	0/0:20,0:20:60.17:0,60,760	0/1:34,0:34:19.51:94,0,20	0/1:23,1:24:52.04:52,0,67	0/0:18,0:18:27.22:0,27,601	0/0:19,0:19:52.05:0,52,676	0/0:7,0:7:21.06:0,21,262	0/0:25,0:25:75.20:0,75,932	0/1:22,1:23:11.64:116,0,12	1/1:31,3:34:70.65:311,71,0	0/0:16,0:16:45.14:0,45,594	0/0:27,0:27:78.24:0,78,1025	0/0:41,0:41:99:0,120,1530	0/0:32,0:32:96.21:0,96,1188	1/1:25,3:28:1.86:146,2,0	1/1:9,2:11:17.95:120,18,0	1/1:58,2:60:26.04:294,26,0	1/1:20,2:22:31.28:154,31,0	0/0:20,0:20:54.09:0,54,633	0/0:33,0:33:99:0,99,1182	1/1:18,0:18:31.13:103,31,0	0/1:17,0:17:35.67:36,0,39	1/1:24,1:24:24.16:142,24,0	1/1:4,0:4:8.67:26,9,0
chr10	83527429	.	TG	T	7992.76	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=13.007;DP=633;FS=4.691;HRun=7;HaplotypeScore=70.3199;InbreedingCoeff=0.9476;MQ=77.30;MQ0=0;MQRankSum=0.183;QD=23.51;ReadPosRankSum=0.127;VQSLOD=4.9662;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:31:72.16:734,72,0	0/0:5,0:5:12.04:0,12,150	0/0:18,1:19:5.06:0,5,331	0/0:17,0:17:39.11:0,39,466	1/1:4,15:19:39.08:397,39,0	0/0:20,0:20:57.18:0,57,716	1/1:2,30:32:60.14:612,60,0	1/1:5,19:24:57.08:562,57,0	0/0:17,0:17:49.03:0,49,593	0/0:19,0:19:48.14:0,48,581	0/0:7,0:7:18.05:0,18,215	0/0:25,0:25:72.20:0,72,880	1/1:3,19:22:57.13:581,57,0	1/1:3,31:34:87.20:887,87,0	0/0:15,0:15:45.13:0,45,554	0/0:26,0:26:78.25:0,78,981	0/0:39,0:39:99:0,117,1470	0/0:34,0:34:90.25:0,90,1097	1/1:7,21:28:72.15:728,72,0	1/1:3,6:9:21.03:207,21,0	1/1:7,51:58:99:1395,138,0	1/1:3,17:20:39.09:397,39,0	0/0:18,0:18:54.17:0,54,677	0/0:32,0:32:93.28:0,93,1153	1/1:2,16:18:42.09:428,42,0	1/1:2,14:16:2.59:332,3,0	1/1:2,23:25:60.05:611,60,0	1/1:0,4:4:12.03:122,12,0
chr10	83527436	.	GT	G	1010.96	PASS	AB=0.982;AC=17;AF=0.304;AN=56;BaseQRankSum=17.372;DP=650;FS=2.228;HRun=2;HaplotypeScore=94.5389;InbreedingCoeff=0.1553;MQ=76.68;MQ0=0;MQRankSum=-1.381;QD=2.86;ReadPosRankSum=4.248;VQSLOD=0.1157;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:18.72:72,0,19	0/0:5,0:5:12.04:0,12,164	0/0:17,0:17:39.66:0,40,442	0/0:16,0:17:48.02:0,48,585	1/1:17,0:17:17.26:73,17,0	0/0:21,0:21:63.19:0,63,871	0/1:35,0:35:56.51:57,0,72	0/1:27,0:27:25.66:26,0,166	0/0:20,0:20:56.81:0,57,723	0/0:17,0:17:51.15:0,51,687	0/0:8,0:8:21.05:0,21,269	0/0:27,0:27:78.20:0,78,1059	1/1:20,0:20:37.59:135,38,0	0/1:37,0:37:1.04:186,0,1	0/0:15,0:15:42.14:0,42,599	0/0:26,0:26:78.26:0,78,1119	0/0:42,0:42:99:0,126,1749	0/0:32,0:32:93.21:0,93,1257	1/1:25,1:26:18.45:116,18,0	0/1:8,1:9:5.72:17,0,6	0/1:62,0:62:99:148,0,107	0/1:20,1:21:26.98:94,0,27	0/0:19,0:19:57.16:0,57,785	0/0:31,0:31:93.30:0,93,1307	0/1:18,1:19:11.32:74,0,11	0/1:18,0:18:68.83:69,0,85	0/1:27,0:26:26.75:111,0,27	0/1:5,0:5:10.80:11,0,13
chr10	83527902	.	T	TTGTG	669.84	PASS	AB=0.848;AC=20;AF=0.526;AN=38;BaseQRankSum=-2.065;DP=451;FS=2.449;HRun=0;HaplotypeScore=95.6197;InbreedingCoeff=0.1006;MQ=68.53;MQ0=19;MQRankSum=2.639;QD=3.12;ReadPosRankSum=-2.084;VQSLOD=1.5348;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:17:4.56:0,5,32	1/1:6,0:6:5.99:63,6,0	./.	./.	./.	1/1:15,0:15:5.94:42,6,0	0/0:14,0:15:2.74:0,3,27	./.	0/1:23,0:23:16.80:58,0,17	1/1:9,0:9:0.47:1,0,0	0/0:6,0:6:2.93:0,3,18	1/1:11,0:11:2.92:17,3,0	0/0:8,0:14:18.02:0,18,165	0/0:7,0:8:2.60:0,3,10	0/1:12,0:15:6.43:6,0,40	0/1:15,1:18:77.95:78,0,101	0/1:21,0:23:26.50:95,0,27	0/1:10,5:20:36.74:73,0,37	./.	./.	./.	./.	1/1:14,0:14:6.02:82,6,0	1/1:17,14:32:8.84:209,9,0	./.	1/1:19,0:18:7.81:67,8,0	0/0:7,0:11:9.01:0,9,84	0/1:5,0:6:6.43:6,0,40
chr10	83529067	.	A	ACCCT	6705.82	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.158;DP=719;FS=1.895;HRun=0;HaplotypeScore=120.2451;InbreedingCoeff=0.9999;MQ=85.68;MQ0=0;MQRankSum=-2.999;QD=56.35;ReadPosRankSum=3.087;VQSLOD=6.5559;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:40:89.13:0,89,461	0/0:12,0:12:36.11:0,36,652	0/0:29,0:29:75.07:0,75,1284	0/0:19,0:19:48.12:0,48,817	1/1:3,15:18:39.11:1014,39,0	0/0:17,0:17:45.10:0,45,815	0/0:34,0:34:99:0,99,1847	0/0:41,0:41:99:0,108,1960	0/0:23,0:23:66.06:0,66,1209	0/0:34,0:34:96.32:0,96,1789	0/0:16,0:16:42.14:0,42,791	0/0:32,0:32:87.30:0,87,1644	1/1:3,18:21:48.16:1215,48,0	1/1:4,25:29:57.23:1540,57,0	0/0:18,0:18:51.17:0,51,938	0/0:22,0:22:63.20:0,63,1149	0/0:39,0:39:99:0,108,2017	0/0:16,0:16:48.16:0,48,911	0/0:17,0:17:51.13:0,51,866	0/0:19,0:19:51.17:0,51,968	0/0:38,0:38:99:0,108,1939	1/1:3,20:23:57.19:1452,57,0	0/0:19,0:19:57.20:0,57,1081	0/0:37,0:37:96.30:0,96,1756	1/1:4,23:27:57.19:1485,57,0	0/0:36,0:36:99:0,105,1979	0/0:26,0:26:72.25:0,72,1358	0/0:16,0:16:45.12:0,45,792
chr10	83529413	.	A	AATCCTCAAC	13679.73	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-1.259;DP=747;FS=4.869;HRun=0;HaplotypeScore=191.6591;InbreedingCoeff=0.9999;MQ=77.83;MQ0=0;MQRankSum=-15.654;QD=93.06;ReadPosRankSum=0.334;VQSLOD=4.5409;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,3765	0/0:12,0:12:33.11:0,33,1012	0/0:21,0:21:57.18:0,57,1643	0/0:21,0:20:60.02:0,60,1279	1/1:6,19:31:63.22:3011,63,0	0/0:17,0:17:48.16:0,48,1459	0/0:27,0:27:81.28:0,81,2527	0/0:41,0:41:99:0,123,3475	0/0:27,0:27:78.22:0,78,2224	0/0:22,0:22:63.21:0,63,1957	0/0:12,0:12:33.10:0,33,1002	0/0:26,0:26:78.24:0,78,2331	1/1:3,11:21:48.16:2196,48,0	1/1:6,15:29:63.22:2870,63,0	0/0:41,0:41:99:0,117,3522	0/0:23,0:23:66.18:0,66,1868	0/0:24,0:24:72.21:0,72,2102	0/0:27,0:27:81.26:0,81,2418	0/0:23,0:22:69.16:0,69,1889	0/0:23,0:23:63.22:0,63,1994	0/0:52,0:52:99:0,157,4845	1/1:5,20:43:72.25:3383,72,0	0/0:23,0:23:66.23:0,66,2128	0/0:32,0:32:93.26:0,93,2777	1/1:3,13:22:48.16:2220,48,0	0/0:18,0:18:51.16:0,51,1531	0/0:31,0:31:93.32:0,93,2989	0/0:13,0:13:39.13:0,39,1242
chr10	83529681	.	GCTGCTCTAA	G	5050.08	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=11.563;DP=628;FS=10.074;HRun=0;HaplotypeScore=181.5408;InbreedingCoeff=0.8860;MQ=63.70;MQ0=0;MQRankSum=-10.896;QD=55.50;ReadPosRankSum=0.014;VQSLOD=4.0676;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,5410	0/0:13,0:13:36.12:0,36,1407	0/1:10,0:9:8.07:8,0,523	0/0:12,0:11:18.64:0,19,610	1/1:5,8:12:12.04:324,12,0	0/0:20,0:20:51.17:0,51,2404	0/0:39,0:39:99:0,114,5063	0/0:25,0:25:66.13:0,66,2623	0/0:25,0:25:75.24:0,75,3310	0/0:15,0:15:42.09:0,42,1745	0/0:10,0:10:30.10:0,30,1455	0/0:32,0:32:93.32:0,93,4428	1/1:4,17:21:48.16:1419,48,0	1/1:2,23:25:72.25:2201,72,0	0/0:24,0:24:72.25:0,72,3503	0/0:31,0:31:87.27:0,87,3991	0/0:43,0:43:99:0,126,5844	0/0:33,0:33:93.30:0,93,4254	0/0:24,0:24:69.24:0,69,2998	0/0:12,0:12:30.10:0,30,1295	0/0:51,0:51:99:0,147,6676	1/1:8,6:14:15.05:457,15,0	0/0:12,0:12:30.10:0,30,1371	0/0:29,0:29:75.20:0,75,3400	1/1:0,8:8:21.07:641,21,0	0/0:14,0:14:42.14:0,42,1915	0/0:26,0:26:78.27:0,78,3786	0/0:6,0:6:18.06:0,18,875
chr10	83529718	.	AGG	A	4027.67	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.427;DP=678;FS=1.373;HRun=3;HaplotypeScore=98.2370;InbreedingCoeff=0.9976;MQ=78.34;MQ0=0;MQRankSum=-10.308;QD=38.36;ReadPosRankSum=-0.272;VQSLOD=3.0743;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,2711	0/0:8,0:8:24.08:0,24,449	0/0:15,0:15:45.15:0,45,837	0/0:19,0:19:57.19:0,57,1053	1/1:2,20:21:45.15:688,45,0	0/0:19,0:19:57.20:0,57,1095	0/0:36,0:36:99:0,102,1971	0/0:31,0:31:93.31:0,93,1753	0/0:24,0:24:72.25:0,72,1390	0/0:23,0:23:66.23:0,66,1274	0/0:9,0:9:24.08:0,24,458	0/0:31,0:31:93.28:0,93,1752	1/1:1,24:25:72.24:1099,72,0	1/1:0,27:27:75.25:1138,75,0	0/0:29,0:29:87.30:0,87,1680	0/0:33,0:33:99:0,99,1913	0/0:36,0:36:99:0,105,2029	0/0:34,0:34:96.33:0,96,1837	0/0:19,0:19:54.19:0,54,1043	0/0:11,0:11:30.10:0,30,579	0/0:54,0:54:99:0,163,3080	1/1:1,13:14:30.10:459,30,0	0/0:7,0:7:21.07:0,21,406	0/0:26,0:26:78.25:0,78,1474	1/1:1,16:17:42.14:643,42,0	0/0:23,0:23:69.22:0,69,1278	0/0:28,0:28:81.28:0,81,1561	0/0:9,0:9:27.09:0,27,522
chr10	83529954	.	C	CGT	764.80	PASS	AB=0.968;AC=16;AF=0.333;AN=48;BaseQRankSum=2.230;DP=596;FS=16.084;HRun=0;HaplotypeScore=111.4464;InbreedingCoeff=0.3508;MQ=69.37;MQ0=14;MQRankSum=-1.267;QD=3.01;ReadPosRankSum=-2.425;VQSLOD=1.0743;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:5.68:0,6,28	0/0:10,0:9:8.95:0,9,73	./.	./.	1/1:12,0:12:3.01:37,3,0	0/0:19,0:19:17.88:0,18,140	1/1:32,0:31:9.46:74,9,0	1/1:26,0:26:9.11:45,9,0	0/0:18,0:18:8.97:0,9,76	0/0:10,0:10:8.88:0,9,58	0/0:6,0:6:2.98:0,3,22	0/0:21,0:20:17.84:0,18,134	0/1:16,0:14:11.70:96,0,12	0/1:29,0:29:3.43:92,0,3	0/0:17,0:18:14.79:0,15,118	0/0:14,0:16:8.86:0,9,78	0/0:42,0:42:33.98:0,34,275	0/0:20,0:20:17.97:0,18,226	0/1:22,0:22:3.08:29,0,3	1/1:13,0:13:2.82:43,3,0	0/1:52,1:53:4.77:196,0,5	./.	0/0:14,0:14:5.85:0,6,46	0/0:31,0:31:11.92:0,12,282	0/1:11,0:11:11.14:66,0,11	1/1:21,0:21:20.89:210,21,0	0/1:15,4:19:32.43:32,0,42	./.
chr10	83529957	.	G	GTA	745.96	PASS	AB=0.855;AC=9;AF=0.161;AN=56;BaseQRankSum=5.958;DP=659;FS=2.933;HRun=0;HaplotypeScore=111.6381;InbreedingCoeff=0.5365;MQ=65.41;MQ0=18;MQRankSum=-0.979;QD=6.49;ReadPosRankSum=-0.339;VQSLOD=3.3816;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:29.90:0,30,243	0/0:14,0:13:18:0,18,191	0/0:29,0:17:38.10:0,38,396	0/0:35,0:28:71.08:0,71,694	1/1:2,11:14:3.01:57,3,0	0/0:19,0:18:47.98:0,48,496	0/0:33,0:32:69.22:0,69,563	0/0:28,0:28:57.83:0,58,487	0/0:18,0:18:38.66:0,39,361	0/0:17,0:17:35.97:0,36,359	0/0:11,0:11:14.97:0,15,137	0/0:29,0:28:56.94:0,57,538	0/1:18,0:16:21.49:281,0,21	0/1:7,24:31:6.44:167,0,6	0/0:20,0:20:41.95:0,42,411	0/0:15,0:15:26.99:0,27,264	0/0:50,0:49:99:0,104,991	0/0:21,0:21:51.26:0,51,563	0/0:20,0:20:39.34:0,39,328	0/0:14,0:13:5.04:0,5,150	0/0:60,0:58:19.29:0,19,502	1/1:12,2:15:17.97:147,18,0	0/0:16,0:16:35.93:0,36,309	0/0:36,0:36:80.99:0,81,860	1/1:14,0:14:21.59:214,22,0	0/1:23,0:23:29.09:29,0,217	0/0:19,0:19:24.15:0,24,328	0/0:6,0:4:8.97:0,9,70
chr10	83530683	.	CCA	C	1378.26	PASS	AB=0.988;AC=26;AF=0.464;AN=56;BaseQRankSum=5.471;DP=294;FS=1.226;HRun=0;HaplotypeScore=55.2319;InbreedingCoeff=0.5591;MQ=74.78;MQ0=0;MQRankSum=0.880;QD=7.07;ReadPosRankSum=2.241;VQSLOD=2.6789;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,1:20:81.67:82,0,88	0/0:3,0:3:5.94:0,6,66	0/0:21,0:13:10.86:0,11,200	0/0:7,0:6:5.68:0,6,56	1/1:1,0:1:2.99:24,3,0	0/0:11,0:11:9.03:0,9,254	1/1:2,25:27:35.41:439,35,0	1/1:10,0:10:15.21:102,15,0	0/0:9,0:9:23.67:0,24,270	0/0:2,0:2:2.94:0,3,29	0/0:2,0:2:6:0,6,59	0/0:11,0:11:26.91:0,27,308	0/1:4,0:5:2.83:10,0,3	1/1:3,0:17:17.48:106,17,0	0/1:7,0:7:1.78:2,0,145	0/0:7,0:7:17.97:0,18,209	0/0:15,0:15:43.01:0,43,449	0/0:4,0:4:11.95:0,12,130	1/1:11,0:11:29.37:202,29,0	1/1:5,0:5:2.99:23,3,0	0/1:47,0:47:10.03:10,0,86	1/1:3,0:8:5.78:31,6,0	0/0:1,0:1:3:0,3,25	0/0:6,0:6:14.50:0,14,140	1/1:2,0:7:8.27:26,8,0	1/1:1,9:10:29.69:347,30,0	1/1:12,1:13:14.84:121,15,0	1/1:0,7:7:3.01:43,3,0
chr10	83530684	.	CA	C	1242.71	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=4.216;DP=293;FS=0.556;HRun=1;HaplotypeScore=52.4793;InbreedingCoeff=0.6911;MQ=74.91;MQ0=0;MQRankSum=-1.219;QD=9.01;ReadPosRankSum=-1.160;VQSLOD=0.5054;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:0.55:1,0,106	0/0:3,0:3:5.93:0,6,54	0/0:21,0:13:9.89:0,10,146	0/0:6,1:6:5.59:0,6,45	1/1:1,0:1:2.99:24,3,0	0/0:10,0:10:8.84:0,9,182	1/1:26,0:26:34.89:271,35,0	1/1:2,7:9:16.94:129,17,0	0/0:9,0:9:23.45:0,23,197	0/0:2,0:2:2.80:0,3,14	0/0:2,0:2:5.97:0,6,45	0/0:11,0:11:25.55:0,26,205	1/1:3,2:6:5.52:43,6,0	1/1:10,5:17:27.37:200,27,0	0/0:8,0:8:1.15:0,1,146	0/0:7,0:7:17.69:0,18,157	0/0:15,0:15:28.78:0,29,330	0/0:4,0:4:11.56:0,12,94	1/1:0,10:10:29.39:229,29,0	1/1:3,1:4:5.94:42,6,0	0/0:49,0:49:54.10:0,54,230	1/1:8,0:8:6.92:36,7,0	0/0:1,0:1:2.99:0,3,24	0/0:6,0:6:9.94:0,10,103	1/1:5,0:6:3.18:14,3,0	1/1:9,1:10:29.62:231,30,0	1/1:2,11:13:15.04:189,15,0	1/1:7,0:7:3:26,3,0
chr10	83530685	.	ACCC	A	1709.20	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-0.751;DP=292;FS=9.587;HRun=9;HaplotypeScore=57.9145;InbreedingCoeff=0.4530;MQ=73.20;MQ0=0;MQRankSum=0.360;QD=13.35;ReadPosRankSum=3.388;VQSLOD=-0.0409;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:21:12.70:0,13,50	0/0:2,0:2:6.02:0,6,102	0/0:20,0:13:20.10:0,20,320	0/0:6,0:5:6.01:0,6,29	1/1:2,0:2:2.29:6,2,0	0/0:9,0:9:24.07:0,24,402	1/1:26,1:27:35.50:296,35,0	0/1:9,0:9:18.60:67,0,19	0/0:9,0:9:24.06:0,24,419	0/0:2,0:2:3.01:0,3,55	0/0:2,0:2:3.01:0,3,64	0/0:11,0:11:27.56:0,28,480	0/0:6,0:7:17.58:0,18,165	0/0:17,0:18:39.02:0,39,383	0/0:7,0:7:12.04:0,12,201	0/0:6,0:6:18.06:0,18,310	0/0:15,0:15:39.13:0,39,731	0/0:4,0:4:12.04:0,12,196	0/1:11,0:11:22.44:160,0,22	0/0:3,0:3:2.70:0,3,38	1/1:8,41:49:79.20:1133,79,0	0/0:9,0:9:10.70:0,11,82	0/0:1,0:1:3:0,3,25	0/0:6,0:6:9.03:0,9,146	0/0:4,0:5:14.92:0,15,148	1/1:10,0:10:13.95:159,14,0	0/1:13,0:13:14.05:21,0,14	1/1:7,0:7:3:28,3,0
chr10	83531406	.	C	CTG	16756.19	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-12.662;DP=645;FS=8.088;HRun=0;HaplotypeScore=77.0411;InbreedingCoeff=0.9974;MQ=82.07;MQ0=1;MQRankSum=-4.531;QD=48.01;ReadPosRankSum=-0.151;VQSLOD=5.1089;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,49:59:99:2507,106,0	0/0:5,0:5:15.04:0,15,209	0/0:24,0:24:62.97:0,63,858	0/0:27,0:27:66.32:0,66,879	1/1:1,30:31:84.28:1569,84,0	0/0:17,0:17:48.13:0,48,691	1/1:6,32:37:90.31:1738,90,0	1/1:3,34:39:99:1947,111,0	0/0:17,0:17:48.16:0,48,735	0/0:22,0:22:63.21:0,63,945	0/0:13,0:13:36.08:0,36,490	0/0:14,0:14:42.13:0,42,623	1/1:2,7:9:24.08:443,24,0	1/1:0,10:11:30.10:569,30,0	0/0:20,0:20:60.20:0,60,918	0/0:21,0:21:63.21:0,63,964	0/0:38,0:38:99:0,108,1603	0/0:26,0:26:74.84:0,75,1112	1/1:0,15:15:45.15:826,45,0	1/1:2,17:19:48.16:904,48,0	1/1:1,32:34:81.28:1542,81,0	1/1:1,18:19:51.17:985,51,0	0/0:20,0:20:51.15:0,51,737	0/0:32,0:32:93.27:0,93,1394	1/1:1,17:18:48.16:927,48,0	1/1:1,28:29:84.25:1498,84,0	1/1:2,15:17:39.13:723,39,0	1/1:0,10:10:30.10:579,30,0
chr10	83531531	.	T	TTCC	12571.12	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-9.201;DP=534;FS=2.061;HRun=0;HaplotypeScore=80.0824;InbreedingCoeff=0.9931;MQ=74.62;MQ0=0;MQRankSum=-7.746;QD=47.80;ReadPosRankSum=-0.461;VQSLOD=6.6815;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,32:42:99:2244,108,0	0/0:8,0:8:21.06:0,21,319	0/0:15,0:14:32.82:0,33,416	0/0:23,0:22:47.38:0,47,660	1/1:3,20:23:60.03:1151,60,0	0/0:10,0:10:27.09:0,27,436	1/1:2,29:31:69.24:1487,69,0	1/1:5,17:22:44.77:904,45,0	0/0:21,0:21:57.15:0,57,858	0/0:20,0:20:54.18:0,54,859	0/0:13,0:13:33.11:0,33,536	0/0:27,0:27:69.22:0,69,1102	1/1:3,9:12:15.05:335,15,0	1/1:2,11:13:39.13:862,39,0	0/0:13,0:13:36.10:0,36,542	0/0:15,0:15:42.14:0,42,685	0/0:37,0:37:90.29:0,90,1432	0/0:29,0:29:87.25:0,87,1385	1/1:2,14:16:42.14:843,42,0	1/1:3,8:11:18.06:402,18,0	1/1:1,23:25:60.20:1281,60,0	1/1:1,15:18:36.07:724,36,0	0/0:12,0:12:30.09:0,30,465	0/0:28,0:28:75.22:0,75,1174	1/1:1,13:14:24.08:507,24,0	1/1:0,15:16:45.15:963,45,0	1/1:2,8:10:24.08:534,24,0	1/1:3,6:9:15.05:335,15,0
chr10	83531642	.	GGGGCTGACCTTGTCCAGTGAGTCTCAGT	G	9169.35	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=9.935;DP=544;FS=1.946;HRun=0;HaplotypeScore=373.2618;InbreedingCoeff=0.9336;MQ=85.70;MQ0=0;MQRankSum=-9.026;QD=74.55;ReadPosRankSum=2.969;VQSLOD=3.1387;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,13:26:15.05:1092,15,0	0/0:11,0:11:30.08:0,30,2637	0/0:17,0:17:42.14:0,42,2029	0/0:26,0:26:61.09:0,61,3847	0/0:15,0:15:45.15:0,45,4113	0/0:22,0:22:63.22:0,63,6605	1/1:7,9:16:12.04:899,12,0	1/1:10,0:10:3.01:49,3,0	0/0:28,0:28:75.26:0,75,8049	0/0:21,0:21:63.21:0,63,6149	0/0:10,0:10:30.10:0,30,3193	0/0:26,0:26:75.26:0,75,7475	0/0:26,0:26:75.26:0,75,7785	0/0:25,0:25:75.24:0,75,8261	0/0:22,0:22:63.20:0,63,6386	0/0:16,0:16:48.16:0,48,5680	0/0:33,0:33:96.31:0,96,10751	0/0:26,0:26:72.22:0,72,8509	1/1:9,8:17:21.06:1200,21,0	1/1:2,6:8:12.04:899,12,0	1/1:8,6:14:6.49:450,6,0	0/0:24,0:24:66.23:0,66,7325	0/0:16,0:16:44.28:0,44,4956	0/0:47,0:47:99:0,138,15976	0/0:10,0:10:24.08:0,24,2685	1/1:2,11:13:30.10:1885,30,0	1/1:5,9:13:27.09:2021,27,0	1/1:2,3:5:9.03:674,9,0
chr10	83531669	.	GT	G	456.97	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=10.625;DP=507;FS=1.187;HRun=1;HaplotypeScore=98.3399;InbreedingCoeff=0.9415;MQ=84.04;MQ0=0;MQRankSum=-8.378;QD=6.35;ReadPosRankSum=3.622;VQSLOD=0.9216;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:12.99:77,13,0	0/0:11,0:11:33.11:0,33,527	0/0:17,0:17:51.09:0,51,774	0/0:21,0:21:51.06:0,51,752	0/0:16,0:16:48.15:0,48,743	0/0:20,0:20:57.17:0,57,886	1/1:9,0:9:9.98:37,10,0	1/1:0,6:6:18.01:213,18,0	0/0:30,0:30:90.29:0,90,1413	0/0:25,0:25:69.20:0,69,1035	0/0:15,0:15:42.14:0,42,666	0/0:21,0:21:63.20:0,63,981	0/0:23,0:23:69.20:0,69,1045	0/0:25,0:25:69.08:0,69,1044	0/0:20,0:20:60.19:0,60,936	0/0:22,0:22:66.21:0,66,1029	0/0:37,0:37:99:0,111,1748	0/0:23,0:23:69.21:0,69,1078	1/1:8,0:8:12.58:47,13,0	1/1:6,0:6:9.98:38,10,0	1/1:6,0:6:4.99:19,5,0	0/0:25,0:25:75.24:0,75,1169	0/0:22,0:22:57.14:0,57,833	0/0:46,0:46:99:0,138,2180	0/0:16,0:16:48.13:0,48,714	1/1:11,0:11:22.97:116,23,0	1/1:10,0:9:22.46:84,22,0	1/1:3,0:3:7.49:28,7,0
chr10	83532100	.	GAC	G	7944.45	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.578;DP=665;FS=19.814;HRun=0;HaplotypeScore=80.0995;InbreedingCoeff=0.9884;MQ=89.42;MQ0=0;MQRankSum=-3.491;QD=42.26;ReadPosRankSum=-0.973;VQSLOD=4.2140;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,2317	0/0:12,0:12:36.12:0,36,695	0/0:21,0:21:57.18:0,57,1048	0/0:29,0:29:74.07:0,74,1456	0/0:24,0:24:72.25:0,72,1374	0/0:19,0:19:51.17:0,51,985	1/1:0,24:24:66.22:1011,66,0	1/1:1,34:35:99:1531,102,0	0/0:27,0:27:75.26:0,75,1449	0/0:26,0:26:75.26:0,75,1449	0/0:11,0:11:33.11:0,33,637	0/0:29,0:29:84.29:0,84,1597	0/0:17,0:17:51.16:0,51,951	0/0:29,0:29:87.30:0,87,1681	0/0:23,0:23:69.24:0,69,1324	0/0:30,0:30:87.30:0,87,1647	0/0:33,0:33:99:0,99,1896	0/0:24,0:24:72.25:0,72,1377	1/1:1,20:21:60.20:914,60,0	1/1:0,13:13:39.10:572,39,0	1/1:1,33:34:93.32:1424,93,0	0/0:16,0:16:48.16:0,48,926	0/0:14,0:14:42.14:0,42,811	0/0:35,0:35:99:0,102,1915	0/0:18,0:18:48.16:0,48,927	1/1:2,22:24:8.23:885,8,0	1/1:0,22:22:66.22:1010,66,0	1/1:0,15:15:39.13:597,39,0
chr10	83533116	.	TA	T	701.40	PASS	AB=0.833;AC=5;AF=0.109;AN=46;BaseQRankSum=7.396;DP=383;FS=4.157;HRun=11;HaplotypeScore=46.1188;InbreedingCoeff=0.6716;MQ=66.64;MQ0=1;MQRankSum=0.774;QD=17.11;ReadPosRankSum=1.554;VQSLOD=4.5294;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:75.96:0,76,827	0/0:2,0:2:6.02:0,6,64	0/0:23,0:11:16.82:0,17,154	0/0:21,0:8:3.11:0,3,38	./.	0/0:17,0:17:45.11:0,45,479	0/1:4,1:5:12.61:13,0,84	0/0:22,0:22:54.14:0,54,576	0/0:12,0:12:29.85:0,30,293	0/0:20,0:20:51.13:0,51,544	0/0:23,0:23:57.13:0,57,600	0/0:11,0:11:19.29:0,19,195	./.	./.	0/0:18,0:18:45.11:0,45,473	0/0:14,0:14:33.06:0,33,338	0/0:28,0:28:72.18:0,72,767	0/0:32,0:32:86.91:0,87,889	0/0:15,0:16:34.95:0,35,340	0/0:11,0:11:30.08:0,30,320	0/0:5,0:6:14.87:0,15,142	./.	0/0:4,0:4:12.03:0,12,128	0/0:6,0:6:18.03:0,18,183	./.	1/1:0,22:22:65.92:541,66,0	0/0:22,1:23:27.16:0,27,536	1/1:2,12:14:32.96:271,33,0
chr10	83533785	.	CGTGTGTGTGT	C	5149.36	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.932;DP=791;FS=15.312;HRun=0;HaplotypeScore=254.5419;InbreedingCoeff=0.9749;MQ=53.57;MQ0=13;MQRankSum=-9.215;QD=37.05;ReadPosRankSum=-2.674;VQSLOD=2.8171;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:34:11.97:0,12,296	0/0:9,0:10:24.08:0,24,1033	0/0:32,0:11:17.65:0,18,649	0/0:27,0:12:23.29:0,23,850	0/0:17,0:24:17.02:0,17,536	0/0:22,0:24:54.19:0,54,2345	0/0:37,0:42:14.76:0,15,403	1/1:13,6:18:18.04:383,18,0	0/0:26,0:29:66.23:0,66,3023	0/0:45,0:46:99:0,111,4867	0/0:15,0:16:27.09:0,27,1002	0/0:25,0:28:72.25:0,72,3245	0/0:16,0:27:42.42:0,42,1116	0/0:18,0:28:38.18:0,38,1209	0/0:34,0:34:87.30:0,87,3977	0/0:20,0:21:57.20:0,57,2435	0/0:34,0:38:90.31:0,90,4038	0/0:24,0:24:72.25:0,72,3460	1/1:16,11:23:20.65:561,21,0	1/1:7,16:23:36.12:804,36,0	0/0:41,0:39:16.28:0,16,481	0/0:25,0:25:21.06:0,21,724	0/0:16,0:20:39.13:0,39,1810	0/0:51,0:57:99:0,123,5322	0/0:8,0:21:25.22:0,25,787	1/1:9,28:36:75.23:2108,75,0	1/1:10,12:23:31.64:890,32,0	1/1:4,6:10:13.79:404,14,0
chr10	83534114	.	AT	A	1831.57	PASS	AB=0.890;AC=6;AF=0.107;AN=56;BaseQRankSum=8.576;DP=759;FS=5.351;HRun=10;HaplotypeScore=81.7782;InbreedingCoeff=0.6841;MQ=66.59;MQ0=0;MQRankSum=0.284;QD=14.09;ReadPosRankSum=1.738;VQSLOD=4.0030;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,52:62:99:1198,138,0	0/0:11,0:11:18.05:0,18,199	0/1:17,1:17:0.08:0,0,233	0/1:12,3:13:33.17:33,0,173	0/0:26,1:26:34.06:0,34,575	0/0:18,0:18:48.03:0,48,506	1/1:2,33:35:83.98:729,84,0	0/0:23,0:23:51.13:0,51,557	0/0:24,0:24:60.15:0,60,656	0/0:36,0:36:93.25:0,93,1022	0/0:16,1:17:25.08:0,25,505	0/0:31,0:31:87.13:0,87,927	0/0:30,0:30:72.19:0,72,796	0/0:29,0:29:72.15:0,72,783	0/0:29,0:30:78.06:0,78,830	0/0:23,0:23:69.17:0,69,754	0/0:41,0:41:99:0,114,1251	0/0:24,0:24:60.16:0,60,664	0/0:17,0:17:36.10:0,36,398	0/0:26,0:26:60.15:0,60,653	0/0:44,0:44:99:0,99,1087	0/0:21,0:21:57.15:0,57,627	0/0:28,0:28:69.18:0,69,753	0/0:31,3:34:12.09:0,12,818	0/0:20,0:21:56.98:0,57,608	0/0:39,0:39:90.07:0,90,955	0/0:25,0:25:69.17:0,69,746	0/0:9,0:9:21.06:0,21,232
chr10	83534434	.	A	AAATGGTGTGAAGATGGAATGAGTCA	2071.20	PASS	AB=0.750;AC=41;AF=0.976;AN=42;BaseQRankSum=-1.634;DP=44;FS=0.000;HRun=0;HaplotypeScore=31.2702;InbreedingCoeff=-0.1670;MQ=114.14;MQ0=2;MQRankSum=-1.535;QD=47.07;ReadPosRankSum=0.050;VQSLOD=1.2226;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:1:3.01:51,3,0	1/1:1,0:1:2.98:22,3,0	1/1:2,1:5:12.01:566,12,0	0/1:2,0:3:17.14:367,0,17	./.	./.	1/1:2,0:2:3:25,3,0	1/1:2,0:2:3:25,3,0	1/1:4,0:4:9.03:321,9,0	./.	./.	1/1:2,0:2:5.98:61,6,0	1/1:3,0:3:9.03:132,9,0	1/1:1,0:1:3.01:40,3,0	1/1:1,0:1:3:25,3,0	1/1:1,0:1:3.01:41,3,0	1/1:1,0:1:2.97:20,3,0	./.	1/1:1,0:2:6.02:165,6,0	1/1:2,0:2:5.97:44,6,0	1/1:3,0:2:3.01:42,3,0	1/1:2,0:2:5.98:72,6,0	1/1:2,0:2:3.01:30,3,0	1/1:1,0:1:2.97:20,3,0	1/1:2,0:2:5.99:63,6,0	1/1:3,0:2:2.99:24,3,0	./.	./.
chr10	83537195	.	ACG	A	836.03	PASS	AB=0.922;AC=16;AF=0.320;AN=50;BaseQRankSum=8.305;DP=535;FS=1.258;HRun=0;HaplotypeScore=135.2207;InbreedingCoeff=0.5222;MQ=61.31;MQ0=3;MQRankSum=-5.212;QD=3.72;ReadPosRankSum=-4.156;VQSLOD=0.8292;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,1:28:16.90:17,0,22	0/0:8,0:8:18.06:0,18,287	0/0:25,0:19:48.15:0,48,585	0/0:22,0:18:44.09:0,44,492	0/0:7,0:7:0.89:0,1,2	0/0:12,0:12:36.06:0,36,496	0/1:25,9:33:2.07:110,0,2	1/1:11,3:13:13.70:137,14,0	0/0:14,0:14:39.01:0,39,549	0/0:10,0:9:21.06:0,21,276	./.	0/0:24,0:24:66.09:0,66,933	0/1:18,0:18:20.20:64,0,20	1/1:22,1:21:0.55:41,1,0	0/0:21,0:21:63.15:0,63,933	0/0:13,0:13:39.07:0,39,598	0/0:43,0:43:99:0,117,1665	0/0:41,0:41:87.15:0,87,1558	1/1:22,2:23:20:183,20,0	./.	1/1:33,0:33:4.10:66,4,0	0/1:12,1:13:9.57:10,0,44	0/0:6,0:6:2.95:0,3,38	0/0:50,0:50:99:0,130,1893	0/0:5,0:5:2.37:0,2,8	1/1:2,0:14:11.21:98,11,0	1/1:11,6:20:25.77:277,26,0	./.
chr10	83537819	.	TAC	T	129.88	PASS	AB=0.894;AC=17;AF=0.370;AN=46;BaseQRankSum=3.959;DP=449;FS=0.000;HRun=0;HaplotypeScore=61.2589;InbreedingCoeff=0.1668;MQ=67.48;MQ0=6;MQRankSum=-0.425;QD=0.54;ReadPosRankSum=0.557;VQSLOD=1.3047;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:5.99:0,6,50	0/0:6,0:6:9:0,9,102	0/0:22,0:16:0:0,0,0	./.	0/1:9,0:18:0:0,0,0	0/1:17,0:16:15.19:15,0,61	1/1:15,0:19:5.68:28,6,0	./.	0/1:5,0:6:8.11:8,0,27	0/0:16,0:16:12.04:0,12,152	0/0:15,0:15:3.01:0,3,32	0/0:13,0:13:9.02:0,9,112	1/1:10,0:11:5.68:28,6,0	./.	0/0:10,0:10:6.02:0,6,87	0/0:9,0:9:3.01:0,3,44	0/1:20,0:20:3.53:4,0,183	0/1:13,1:14:20.11:20,0,111	0/0:15,0:14:0.89:0,1,2	1/1:13,2:14:3.01:32,3,0	0/1:37,3:38:7.02:7,0,98	1/1:17,0:17:2.84:14,3,0	0/0:8,0:8:2.99:0,3,24	0/1:28,5:33:5.08:5,0,300	0/0:4,0:5:0:0,0,0	./.	1/1:25,4:29:8.98:97,9,0	./.
chr10	83540882	.	T	TA	1263.14	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.081;DP=688;FS=2.039;HRun=8;HaplotypeScore=72.3294;InbreedingCoeff=0.9942;MQ=76.78;MQ0=0;MQRankSum=-2.038;QD=29.38;ReadPosRankSum=-0.028;VQSLOD=3.6577;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,123,1126	0/0:9,0:9:26.98:0,27,240	0/0:18,0:18:38.89:0,39,331	0/0:16,0:16:25.82:0,26,214	0/0:22,0:22:35.26:0,35,328	0/0:21,0:21:54.02:0,54,494	0/0:32,0:32:86.99:0,87,781	0/0:37,0:37:99:0,99,903	0/0:28,0:28:78.02:0,78,709	0/0:40,0:40:99:0,105,961	0/0:10,0:10:17.99:0,18,165	0/0:29,0:29:83.99:0,84,752	0/0:26,0:26:72.04:0,72,658	0/0:24,0:24:63.03:0,63,577	0/0:14,0:14:42.02:0,42,384	0/0:18,0:18:54.03:0,54,494	0/0:29,0:29:87.02:0,87,790	0/0:21,0:21:54.02:0,54,494	0/0:18,0:18:39.02:0,39,357	0/0:16,0:16:36.01:0,36,329	0/0:45,0:45:99:0,132,1208	0/0:26,0:26:57.01:0,57,522	0/0:21,0:21:42:0,42,384	0/0:26,0:26:75:0,75,678	0/0:31,0:31:81.04:0,81,741	1/1:2,29:31:87.26:1004,87,0	0/0:22,0:22:57.02:0,57,522	1/1:1,11:12:33.10:381,33,0
chr10	83541194	.	C	CCCAGTCTCGAACGATAGGTGGAG	2260.34	PASS	AB=0.722;AC=34;AF=0.944;AN=36;BaseQRankSum=-3.012;DP=57;FS=9.592;HRun=0;HaplotypeScore=45.0723;InbreedingCoeff=-0.1725;MQ=136.72;MQ0=0;MQRankSum=-2.209;QD=41.10;ReadPosRankSum=-2.538;VQSLOD=-0.4692;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:14.97:134,15,0	./.	0/1:4,0:8:16.61:450,0,17	0/1:5,1:7:26.65:650,0,27	./.	./.	1/1:2,0:2:3:25,3,0	1/1:3,0:3:9.01:97,9,0	./.	1/1:2,0:2:6.02:125,6,0	1/1:1,0:1:3:25,3,0	1/1:2,0:2:6.01:64,6,0	1/1:1,0:1:3.01:41,3,0	./.	1/1:1,0:1:3:25,3,0	./.	1/1:3,0:3:9:89,9,0	1/1:2,0:3:6:86,6,0	1/1:5,0:5:15:200,15,0	1/1:1,0:1:3.01:42,3,0	1/1:3,0:3:9:118,9,0	1/1:3,0:3:9.02:116,9,0	./.	1/1:2,0:2:2.97:20,3,0	./.	1/1:1,0:1:3.01:47,3,0	./.	./.
chr10	83565201	.	TC	T	686.50	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.973;DP=603;FS=3.028;HRun=1;HaplotypeScore=62.5674;InbreedingCoeff=0.9833;MQ=73.51;MQ0=0;MQRankSum=-1.421;QD=34.32;ReadPosRankSum=0.780;VQSLOD=3.5150;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1750	0/0:11,0:11:27.09:0,27,430	0/0:20,0:20:60.19:0,60,913	0/0:22,0:23:64.99:0,65,932	0/0:16,0:16:45.15:0,45,715	0/0:21,0:21:60.17:0,60,908	0/0:31,0:31:93.31:0,93,1467	0/0:23,0:23:66.20:0,66,985	0/0:17,0:17:51.16:0,51,791	0/0:29,0:29:84.27:0,84,1291	0/0:14,0:14:33.58:0,34,524	0/0:18,0:18:54.18:0,54,859	0/0:15,0:15:45.15:0,45,714	0/0:15,0:15:45.12:0,45,670	0/0:20,0:20:60.19:0,60,934	0/0:21,0:21:63.18:0,63,959	0/0:34,0:34:99:0,102,1561	0/0:40,0:40:99:0,108,1669	0/0:20,0:20:60.19:0,60,920	0/0:22,0:22:66.06:0,66,981	0/0:24,0:24:72.23:0,72,1113	0/0:26,0:26:57.13:0,57,854	0/0:19,0:19:57.02:0,57,872	0/0:27,0:27:81.26:0,81,1260	0/0:18,0:18:48.16:0,48,758	1/1:0,16:16:48.13:636,48,0	0/0:20,0:19:60.15:0,60,927	1/1:0,4:4:12.04:168,12,0
chr10	83565819	.	CAG	C	1596.41	PASS	AB=0.912;AC=24;AF=0.500;AN=48;BaseQRankSum=3.419;DP=481;FS=34.059;HRun=0;HaplotypeScore=76.6813;InbreedingCoeff=0.5690;MQ=65.74;MQ0=4;MQRankSum=3.189;QD=7.03;ReadPosRankSum=6.062;VQSLOD=1.4179;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:42.71:0,43,378	1/1:3,2:6:8.86:80,9,0	./.	0/0:34,0:15:0:0,0,1	0/1:17,0:17:0:0,0,0	0/1:14,2:16:15.12:15,0,184	0/0:22,0:19:9:0,9,95	0/0:30,0:29:33.88:0,34,338	1/1:10,3:16:14.54:108,15,0	0/1:10,2:13:4.63:68,0,5	1/1:7,4:14:20.09:169,20,0	1/1:14,3:19:14.70:127,15,0	0/0:21,0:21:14.59:0,15,150	0/0:9,0:9:3.01:0,3,36	1/1:15,3:18:9.02:99,9,0	1/1:4,2:6:6.02:66,6,0	1/1:17,8:26:34.57:326,35,0	1/1:11,7:21:26.57:241,27,0	0/0:16,0:16:11.99:0,12,117	./.	0/0:15,0:14:2.50:0,2,9	./.	1/1:2,3:6:8.86:80,9,0	1/1:15,13:31:35.93:379,36,0	./.	0/0:13,0:13:3.87:0,4,159	0/1:17,0:16:5.09:5,0,72	0/0:6,0:5:5.98:0,6,59
chr10	83565990	.	CA	C	1163.34	PASS	AB=0.766;AC=26;AF=0.464;AN=56;BaseQRankSum=10.133;DP=446;FS=4.336;HRun=14;HaplotypeScore=65.1180;InbreedingCoeff=0.7431;MQ=79.76;MQ0=7;MQRankSum=-0.729;QD=5.19;ReadPosRankSum=2.546;VQSLOD=2.3185;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,22:35:72.43:494,72,0	0/0:3,0:3:3:0,3,28	0/0:37,0:15:20.80:0,21,154	0/1:41,1:22:20.05:20,0,30	0/1:5,13:19:0.05:136,0,0	0/0:21,1:21:33.45:0,33,430	1/1:4,8:12:17.81:122,18,0	1/1:9,1:18:5.50:51,6,0	0/0:14,0:14:21:0,21,188	0/0:17,0:17:21.02:0,21,192	0/0:7,0:7:12.01:0,12,108	0/0:10,1:11:3.40:0,3,163	1/1:6,5:11:11.78:82,12,0	1/1:4,3:8:13.89:88,14,0	0/0:11,0:14:8.64:0,9,48	0/0:10,0:10:15.01:0,15,135	0/0:27,1:31:36.77:0,37,598	0/0:20,1:22:33.25:0,33,425	1/1:4,0:13:15.46:45,15,0	1/1:2,0:13:19.62:57,20,0	0/0:7,0:7:1.92:0,2,143	1/1:5,4:9:8.90:62,9,0	0/0:10,0:10:24.01:0,24,217	0/0:16,0:16:12.54:0,13,249	1/1:6,8:15:16.84:109,17,0	1/1:3,0:11:15.58:45,16,0	1/1:0,0:9:14.17:41,14,0	1/1:3,0:6:6.09:18,6,0
chr10	83566109	.	GA	G	2217.41	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.301;DP=484;FS=0.000;HRun=10;HaplotypeScore=48.0899;InbreedingCoeff=0.9478;MQ=64.35;MQ0=10;MQRankSum=1.306;QD=16.19;ReadPosRankSum=2.083;VQSLOD=3.7192;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:36:86.98:755,87,0	0/0:6,0:6:15.04:0,15,166	0/0:21,0:13:11.40:0,11,277	0/0:17,0:5:3.89:0,4,29	1/1:9,19:28:50.97:442,51,0	0/0:21,0:21:57.09:0,57,615	1/1:3,16:19:32.98:287,33,0	0/0:17,0:15:39.05:0,39,402	0/0:10,0:9:27.05:0,27,287	0/0:27,0:26:66.16:0,66,717	0/0:16,0:15:42.11:0,42,459	0/0:12,0:12:36.10:0,36,398	1/1:2,5:7:11.98:104,12,0	1/1:4,7:11:17.99:156,18,0	0/0:10,0:10:24.06:0,24,266	0/0:9,0:9:24.06:0,24,266	0/0:34,0:34:84.21:0,84,920	0/0:31,1:32:82.39:0,82,866	0/0:19,0:19:54.09:0,54,571	0/0:18,1:18:18.84:0,19,397	1/1:2,11:13:29.98:260,30,0	1/1:1,7:7:8.98:77,9,0	0/0:14,0:14:36.07:0,36,382	0/0:12,0:12:33.09:0,33,365	1/1:1,14:15:38.98:339,39,0	0/0:15,0:15:39.10:0,39,429	0/0:25,0:25:60.15:0,60,654	0/0:11,0:11:33.09:0,33,364
chr10	83566962	.	AAGTAAGCTGAACTT	A	6241.32	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.238;DP=521;FS=0.519;HRun=0;HaplotypeScore=205.2449;InbreedingCoeff=0.9473;MQ=65.96;MQ0=1;MQRankSum=-8.004;QD=104.02;ReadPosRankSum=-1.279;VQSLOD=4.5506;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,6245	0/0:7,0:7:21.07:0,21,1288	0/0:15,0:12:27.04:0,27,927	0/0:8,0:6:9.55:0,10,561	0/0:25,0:25:75.26:0,75,4606	0/0:19,0:19:57.18:0,57,3474	0/0:14,0:14:42.14:0,42,2969	1/1:0,18:18:54.15:1677,54,0	0/0:20,0:20:60.21:0,60,4201	0/0:26,0:26:78.27:0,78,5014	0/0:24,0:24:72.22:0,72,4563	0/0:22,0:22:66.22:0,66,4213	0/0:14,0:14:42.14:0,42,2861	0/0:15,0:15:45.15:0,45,2752	0/0:14,0:14:42.14:0,42,2568	0/0:18,0:18:54.19:0,54,3411	0/0:38,0:38:99:0,114,7656	0/0:5,0:4:15.05:0,15,951	1/1:0,4:4:12.02:413,12,0	1/1:0,23:23:57.18:2465,57,0	1/1:0,4:4:6.02:259,6,0	0/0:22,0:22:66.23:0,66,4429	0/0:26,0:26:78.27:0,78,4887	0/0:26,0:26:78.22:0,78,5123	0/0:34,0:33:99:0,102,6552	0/0:30,0:30:90.30:0,90,5623	1/1:0,11:11:33.11:1427,33,0	0/0:5,0:5:15.05:0,15,1074
chr10	83567009	.	T	TGGCAGA	3806.06	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-0.668;DP=554;FS=1.994;HRun=0;HaplotypeScore=135.7637;InbreedingCoeff=0.9632;MQ=56.96;MQ0=0;MQRankSum=-8.580;QD=41.37;ReadPosRankSum=-4.039;VQSLOD=2.7388;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:93.21:0,93,1549	0/0:13,0:13:30.09:0,30,604	0/0:16,0:13:8.98:0,9,149	0/0:27,0:25:54.11:0,54,936	0/0:32,0:32:63.01:0,63,913	0/0:18,0:18:45.15:0,45,906	0/0:16,0:16:45.13:0,45,861	1/1:22,5:27:48.16:1330,48,0	0/0:13,0:13:24.08:0,24,495	0/0:22,0:22:60.13:0,60,970	0/0:22,0:22:45.05:0,45,762	0/0:25,0:25:54.17:0,54,1082	0/0:11,0:11:33.10:0,33,647	0/0:12,0:12:33.09:0,33,629	0/0:11,0:11:27.09:0,27,560	0/0:15,0:15:33.11:0,33,708	0/0:30,0:30:81.17:0,81,1569	0/0:11,0:11:33.08:0,33,660	1/1:10,0:10:9.02:225,9,0	1/1:18,8:26:30.10:925,30,0	1/1:7,2:9:12.04:240,12,0	0/0:24,0:24:50.90:0,51,920	0/0:19,0:19:41.87:0,42,579	0/0:30,0:30:69.18:0,69,1395	0/0:24,0:24:51.16:0,51,951	0/0:23,0:23:54.14:0,54,799	1/1:10,10:20:33.11:1086,33,0	0/0:7,0:7:21.07:0,21,450
chr10	83567717	.	GA	G	2215.41	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.768;DP=646;FS=3.107;HRun=9;HaplotypeScore=75.0887;InbreedingCoeff=0.9691;MQ=74.91;MQ0=0;MQRankSum=-6.194;QD=18.46;ReadPosRankSum=-1.366;VQSLOD=3.5700;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:78.22:0,78,890	0/0:11,0:11:33.10:0,33,381	0/0:22,0:19:30.52:0,31,337	0/0:25,0:21:4.90:0,5,233	0/0:42,1:43:92.87:0,93,1310	0/0:31,0:31:87.25:0,87,996	0/0:19,0:19:48.14:0,48,554	1/1:9,18:28:56.04:500,56,0	0/0:19,0:19:45.07:0,45,484	0/0:33,0:33:93.26:0,93,1063	0/0:25,0:25:72.21:0,72,831	0/0:12,0:12:36.11:0,36,415	0/0:16,0:16:42.12:0,42,485	0/0:11,0:11:21.06:0,21,242	0/0:13,0:13:33.10:0,33,381	0/0:9,0:9:24.07:0,24,277	0/0:33,1:34:50.78:0,51,830	0/0:24,0:24:66.15:0,66,746	1/1:7,20:27:63.01:573,63,0	1/1:6,12:17:36:329,36,0	1/1:4,13:17:36.02:330,36,0	0/0:20,0:20:57.14:0,57,644	0/0:23,0:23:54.14:0,54,612	0/0:21,0:21:51.14:0,51,577	0/0:18,0:18:54.16:0,54,623	0/0:41,0:40:99:0,105,1203	1/1:7,23:30:72.04:659,72,0	0/0:23,0:23:63.16:0,63,705
chr10	83567743	.	G	GTGTTT	4787.36	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=1.077;DP=617;FS=23.115;HRun=0;HaplotypeScore=120.4500;InbreedingCoeff=0.9848;MQ=71.19;MQ0=0;MQRankSum=-9.808;QD=49.87;ReadPosRankSum=-1.405;VQSLOD=3.1530;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:96.33:0,96,1817	0/0:12,0:12:33.10:0,33,592	0/0:18,0:15:17.34:0,17,231	0/0:24,0:20:12:0,12,302	0/0:37,0:37:81.25:0,81,1497	0/0:28,0:28:75.26:0,75,1424	0/0:27,0:27:63.18:0,63,1138	1/1:19,7:26:36.11:947,36,0	0/0:18,0:18:45.14:0,45,835	0/0:38,0:38:93.31:0,93,1755	0/0:26,0:26:60.18:0,60,1083	0/0:16,0:16:42.14:0,42,802	0/0:16,0:16:42.14:0,42,790	0/0:8,0:8:21.07:0,21,395	0/0:12,0:12:30.10:0,30,579	0/0:12,0:12:30.09:0,30,546	0/0:26,0:26:57.17:0,57,1065	0/0:24,0:24:60.18:0,60,1122	1/1:17,16:33:60.18:1542,60,0	1/1:4,7:11:21.07:614,21,0	0/0:13,0:13:30.10:0,30,570	0/0:23,0:23:60.19:0,60,1116	0/0:23,0:23:60.19:0,60,1125	0/0:15,0:15:33.07:0,33,598	0/0:15,0:15:39.13:0,39,752	0/0:37,0:36:81.23:0,81,1525	1/1:8,18:26:60.14:1685,60,0	0/0:16,0:16:21.02:0,21,304
chr10	83567857	.	C	CA	1930.96	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.252;DP=603;FS=12.215;HRun=5;HaplotypeScore=69.5968;InbreedingCoeff=0.9859;MQ=72.02;MQ0=0;MQRankSum=-3.112;QD=32.73;ReadPosRankSum=0.422;VQSLOD=3.3092;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:93.30:1224,93,0	0/0:8,0:8:24.06:0,24,258	0/0:26,0:26:65.83:0,66,684	0/0:13,0:13:13.03:0,13,349	0/0:19,0:19:51.13:0,51,548	0/0:14,0:14:36.09:0,36,387	1/1:3,23:26:63.20:829,63,0	0/0:18,0:18:42.10:0,42,451	0/0:14,0:14:42.09:0,42,443	0/0:23,0:23:63.04:0,63,676	0/0:21,0:21:54.13:0,54,580	0/0:18,0:18:54.12:0,54,572	0/0:13,0:13:39.10:0,39,419	0/0:18,0:18:45.11:0,45,483	0/0:24,0:24:69.16:0,69,734	0/0:10,0:10:30.04:0,30,306	0/0:38,0:38:99:0,114,1225	0/0:32,0:32:84.18:0,84,893	0/0:20,0:19:48.12:0,48,516	0/0:24,0:24:66.17:0,66,709	0/0:31,0:31:87.20:0,87,926	0/0:17,0:17:48.12:0,48,516	0/0:20,0:20:45.11:0,45,483	0/0:35,0:35:96.22:0,96,1023	0/0:20,0:20:60.15:0,60,645	0/0:31,0:31:87.20:0,87,922	0/0:24,0:24:57.14:0,57,612	0/0:13,0:13:39.10:0,39,419
chr10	83568283	.	AAAAGG	A	3949.89	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.504;DP=655;FS=0.000;HRun=0;HaplotypeScore=143.7778;InbreedingCoeff=0.9860;MQ=87.37;MQ0=0;MQRankSum=-12.684;QD=47.02;ReadPosRankSum=-1.130;VQSLOD=3.5848;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.30:0,90,2805	0/0:17,0:17:51.18:0,51,1531	0/0:30,0:30:84.27:0,84,2489	0/0:18,0:18:45.11:0,45,1166	0/0:24,0:24:72.24:0,72,1677	0/0:32,0:32:96.33:0,96,3045	0/0:23,0:23:66.23:0,66,1967	1/1:0,21:21:63.19:1263,63,0	0/0:26,0:26:75.25:0,75,2279	0/0:35,0:35:99:0,105,3239	0/0:16,0:16:48.16:0,48,1546	0/0:29,0:29:87.30:0,87,2760	0/0:33,0:33:99:0,99,2264	0/0:20,0:20:57.19:0,57,1253	0/0:28,0:28:84.29:0,84,2701	0/0:28,0:28:84.29:0,84,2651	0/0:20,0:20:57.17:0,57,1753	0/0:19,0:19:57.20:0,57,1733	1/1:1,15:16:45.15:958,45,0	1/1:2,6:8:9.01:191,9,0	1/1:2,16:18:39.13:771,39,0	0/0:27,0:27:72.25:0,72,1667	0/0:17,0:17:48.16:0,48,1436	0/0:18,0:18:54.19:0,54,1742	0/0:28,0:28:84.29:0,84,1881	0/0:43,0:43:99:0,129,4121	1/1:2,19:15:36.12:766,36,0	0/0:10,0:10:27.09:0,27,849
chr10	83568541	.	CGTTGTCCTGGCCGGATGTCA	C	3462.56	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.906;DP=625;FS=33.989;HRun=0;HaplotypeScore=309.8901;InbreedingCoeff=0.9204;MQ=72.73;MQ0=0;MQRankSum=-7.361;QD=59.70;ReadPosRankSum=0.239;VQSLOD=1.8656;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,109,9693	0/0:8,0:8:18.06:0,18,1733	0/0:18,0:17:45.15:0,45,2367	0/0:21,0:15:45.15:0,45,2900	0/0:22,0:22:54.19:0,54,4795	0/0:25,0:25:75.26:0,75,6416	0/0:32,0:32:90.30:0,90,7356	1/1:0,5:4:12:408,12,0	0/0:29,0:29:84.29:0,84,7446	0/0:32,0:31:93.32:0,93,8007	0/0:22,0:22:63.22:0,63,5455	0/0:19,0:19:51.18:0,51,4389	0/0:20,0:20:57.17:0,57,4687	0/0:28,0:28:84.26:0,84,7518	0/0:25,0:25:72.23:0,72,6134	0/0:22,0:22:63.22:0,63,5404	0/0:40,0:40:99:0,117,10299	0/0:26,0:26:78.27:0,78,6724	1/1:2,4:6:5.98:188,6,0	1/1:8,9:17:21.07:1180,21,0	1/1:10,7:15:3.01:169,3,0	0/0:28,0:28:78.27:0,78,7264	0/0:20,0:20:60.21:0,60,5127	0/0:28,0:28:84.27:0,84,7247	0/0:22,0:22:66.22:0,66,5851	0/0:32,0:32:93.32:0,93,8001	1/1:4,9:11:27.09:1517,27,0	0/0:9,0:9:24.08:0,24,2299
chr10	83568675	.	G	GTTAATCTGTAA	6241.36	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-1.937;DP=679;FS=6.667;HRun=0;HaplotypeScore=207.7351;InbreedingCoeff=0.9948;MQ=80.28;MQ0=0;MQRankSum=-9.741;QD=75.20;ReadPosRankSum=-1.244;VQSLOD=3.8959;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,163,5075	0/0:13,0:13:36.12:0,36,1210	0/0:14,0:14:33.11:0,33,1019	0/0:23,0:23:51.03:0,51,1309	0/0:26,0:25:63.22:0,63,1974	0/0:23,0:23:66.23:0,66,2184	0/0:22,0:22:60.21:0,60,1731	1/1:15,6:22:30.06:1366,30,0	0/0:33,0:33:93.31:0,93,2860	0/0:25,0:25:69.23:0,69,2027	0/0:15,0:15:39.13:0,39,1236	0/0:29,0:29:72.25:0,72,2371	0/0:24,0:24:57.20:0,57,1861	0/0:34,0:34:93.32:0,93,2935	0/0:21,0:21:60.21:0,60,1805	0/0:21,0:20:60.21:0,60,1959	0/0:41,0:41:99:0,114,3596	0/0:26,0:26:66.23:0,66,2072	1/1:3,4:9:27.06:1004,27,0	1/1:7,4:12:21.07:945,21,0	1/1:15,1:15:15.05:580,15,0	0/0:25,0:25:72.16:0,72,2030	0/0:27,0:27:78.27:0,78,2414	0/0:35,0:35:96.29:0,96,3072	0/0:14,0:14:36.12:0,36,1072	0/0:27,0:27:81.28:0,81,2543	1/1:3,18:23:42.14:2346,42,0	0/0:22,0:22:63.22:0,63,1900
chr10	83568894	.	C	CAATAAATAAATAAATA	5764.70	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-5.128;DP=575;FS=24.036;HRun=0;HaplotypeScore=239.9091;InbreedingCoeff=0.9461;MQ=60.79;MQ0=1;MQRankSum=-6.981;QD=57.65;ReadPosRankSum=-4.293;VQSLOD=2.4920;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:81.26:0,81,2740	0/0:8,0:8:21.06:0,21,750	0/0:21,0:19:39.12:0,39,996	0/0:11,0:11:21.09:0,21,755	0/0:28,0:28:72.22:0,72,2753	0/0:21,0:21:60.20:0,60,2202	0/0:23,0:23:57.15:0,57,1849	1/1:26,0:25:48.05:1298,48,0	0/0:23,0:23:63.17:0,63,2085	0/0:31,0:31:72.22:0,72,2481	0/0:25,0:25:72.08:0,72,2272	0/0:11,0:11:27.08:0,27,891	0/0:12,0:12:36.10:0,36,1266	0/0:20,0:19:54.17:0,54,1912	0/0:19,0:19:54.19:0,54,2267	0/0:22,0:22:60.19:0,60,2219	0/0:23,0:22:54.17:0,54,1925	0/0:25,0:25:59.30:0,59,1922	1/1:9,14:26:66.20:2280,66,0	1/1:4,11:17:15.05:998,15,0	1/1:1,0:1:3.01:34,3,0	0/0:21,0:21:57.14:0,57,1750	0/0:18,0:18:45.14:0,45,1421	0/0:19,0:19:51.11:0,51,1412	0/0:18,0:18:45.15:0,45,1946	0/0:25,0:25:72.24:0,72,2664	1/1:4,20:29:13.08:1155,13,0	0/0:17,0:17:33.83:0,34,1270
chr10	83571773	.	AACAC	A	246.90	PASS	AB=0.943;AC=13;AF=0.260;AN=50;BaseQRankSum=3.087;DP=500;FS=10.438;HRun=0;HaplotypeScore=87.3395;InbreedingCoeff=0.3630;MQ=63.40;MQ0=14;MQRankSum=-0.914;QD=1.84;ReadPosRankSum=0.096;VQSLOD=0.3620;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:33:20.86:0,21,356	0/0:5,0:5:9.03:0,9,184	./.	0/0:36,0:17:0:0,0,0	0/0:10,2:13:2.74:0,3,12	0/0:12,0:12:5.69:0,6,76	1/1:13,0:14:3.01:47,3,0	0/0:24,0:24:3.01:0,3,49	0/0:17,0:17:17.97:0,18,275	0/0:23,0:23:9.50:0,10,134	0/0:11,0:12:5.75:0,6,56	0/1:11,0:10:31.56:32,0,120	./.	0/1:13,2:15:18.48:84,0,18	0/0:17,0:18:8.77:0,9,153	0/0:11,0:11:6.02:0,6,141	0/0:22,0:22:27.09:0,27,607	0/0:13,0:13:8.99:0,9,153	0/0:20,0:20:14.86:0,15,150	0/1:17,1:18:31.91:32,0,127	1/1:29,0:30:6.89:58,7,0	1/1:11,1:11:3.01:47,3,0	0/0:18,0:18:17.95:0,18,248	0/0:27,0:27:24.05:0,24,465	1/1:8,5:13:3.01:47,3,0	1/1:19,0:20:5.88:43,6,0	0/0:15,0:13:12:0,12,224	./.
chr10	83571874	.	TG	T	1363.17	PASS	AB=0.615;AC=9;AF=0.173;AN=52;BaseQRankSum=2.207;DP=412;FS=2.958;HRun=3;HaplotypeScore=67.9734;InbreedingCoeff=0.8380;MQ=46.84;MQ0=19;MQRankSum=1.524;QD=24.34;ReadPosRankSum=2.079;VQSLOD=3.0986;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:54.12:0,54,732	0/0:10,0:10:24.05:0,24,300	./.	./.	1/1:2,12:14:30.09:366,30,0	0/0:19,0:17:33.11:0,33,474	0/0:21,0:21:50.94:0,51,638	0/0:10,0:10:20.70:0,21,296	0/0:11,0:11:24.08:0,24,345	0/0:23,0:20:51.17:0,51,713	0/0:8,0:8:20.96:0,21,302	0/0:16,0:16:27.02:0,27,356	1/1:2,18:19:48.15:595,48,0	0/1:3,5:7:15.90:164,0,16	0/0:15,0:15:33.11:0,33,468	0/0:7,0:7:18.06:0,18,259	0/0:36,0:34:75.16:0,75,1013	0/0:14,0:13:20.94:0,21,302	0/0:14,0:11:30.09:0,30,416	0/0:11,0:11:30.10:0,30,431	0/0:22,0:22:56.75:0,57,666	1/1:4,2:6:12.03:139,12,0	0/0:10,0:10:24.08:0,24,345	0/0:38,0:38:81.16:0,81,1138	1/1:0,8:8:21.07:259,21,0	0/0:19,0:17:48.16:0,48,691	0/0:6,0:6:11.80:0,12,118	0/0:8,0:8:12.01:0,12,151
chr10	83571903	.	A	AAAAAG	1639.64	PASS	AB=0.985;AC=14;AF=0.250;AN=56;BaseQRankSum=4.047;DP=583;FS=11.225;HRun=0;HaplotypeScore=140.8917;InbreedingCoeff=0.5432;MQ=47.71;MQ0=26;MQRankSum=-3.241;QD=9.59;ReadPosRankSum=2.944;VQSLOD=1.6828;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:29:42.77:476,43,0	0/0:12,0:12:29:0,29,298	0/0:34,0:5:1.36:0,1,45	0/0:21,0:3:8.95:0,9,80	0/0:24,0:24:51.74:0,52,435	0/0:21,0:21:46.98:0,47,477	1/1:27,0:27:37.15:350,37,0	0/1:15,0:14:11.67:133,0,12	0/0:12,0:12:25.14:0,25,175	0/0:24,0:23:42.45:0,42,372	0/0:14,0:14:5.09:0,5,184	0/0:19,0:18:34.92:0,35,243	0/0:12,0:12:22.78:0,23,176	0/0:17,0:17:43.09:0,43,305	0/0:12,0:12:29.79:0,30,247	0/0:15,0:15:35.88:0,36,330	0/0:58,0:54:84.84:0,85,928	0/0:23,0:22:29.93:0,30,287	0/1:18,0:16:7.35:7,0,67	0/1:21,0:21:50.97:55,0,51	1/1:7,0:7:11.52:58,12,0	0/0:15,0:15:35.98:0,36,333	0/0:17,0:17:10.80:0,11,296	0/0:40,0:40:35.35:0,35,785	0/0:22,0:22:44.02:0,44,370	1/1:23,1:24:7.65:426,8,0	0/1:14,0:14:21.58:22,0,41	1/1:1,7:11:12.04:288,12,0
chr10	83571905	.	A	AAAG	1606.45	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=3.354;DP=593;FS=3.020;HRun=0;HaplotypeScore=124.4919;InbreedingCoeff=0.4047;MQ=47.60;MQ0=24;MQRankSum=-2.779;QD=7.72;ReadPosRankSum=4.435;VQSLOD=3.0038;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,13:30:55.99:761,56,0	0/0:12,0:12:27.71:0,28,274	0/1:35,0:5:2.03:2,0,73	0/0:21,0:4:8.99:0,9,94	0/0:27,0:27:55.17:0,55,443	0/0:22,0:22:47.83:0,48,479	1/1:6,13:23:27.18:507,27,0	0/1:17,0:15:18.47:18,0,102	0/0:12,0:12:27.36:0,27,218	0/0:27,0:26:52.03:0,52,427	0/0:14,0:14:25.38:0,25,218	0/0:19,0:18:38.51:0,39,299	0/0:12,0:12:22.83:0,23,188	0/0:17,0:17:46.67:0,47,347	0/0:11,0:11:29.94:0,30,289	0/0:15,0:15:41.89:0,42,395	0/0:58,0:54:97.35:0,97,1024	0/0:23,0:22:40.50:0,41,372	0/1:19,0:17:29.68:30,0,68	0/1:22,0:22:22.40:22,0,78	1/1:8,0:8:3.99:22,4,0	0/0:15,0:15:44.48:0,44,403	0/0:18,0:18:41.09:0,41,380	0/0:40,0:40:64.27:0,64,771	0/0:22,0:22:56.27:0,56,496	0/1:26,0:26:99:263,0,188	0/1:14,0:14:20.06:20,0,95	1/1:11,0:10:12.03:131,12,0
chr10	83571972	.	A	ACG	5240.34	PASS	AB=0.627;AC=25;AF=0.446;AN=56;BaseQRankSum=9.625;DP=649;FS=0.409;HRun=0;HaplotypeScore=164.4679;InbreedingCoeff=0.7878;MQ=49.40;MQ0=14;MQRankSum=-4.044;QD=16.85;ReadPosRankSum=-1.051;VQSLOD=4.6953;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,16:27:22.89:312,23,0	0/0:6,0:6:18.05:0,18,254	0/0:57,0:22:44.78:0,45,599	0/0:49,0:17:25.88:0,26,451	1/1:7,8:16:9.50:158,10,0	0/0:16,0:16:42.14:0,42,638	1/1:8,14:22:38.41:665,38,0	1/1:23,8:26:36.80:808,37,0	0/0:11,0:10:30.09:0,30,422	0/0:28,0:28:84.25:0,84,1204	0/0:13,0:13:36.06:0,36,481	0/0:16,0:15:39.55:0,40,531	1/1:1,12:13:14.78:274,15,0	0/1:4,11:15:11.37:95,0,11	0/0:12,0:12:27.08:0,27,391	0/0:13,0:13:36.11:0,36,527	0/0:38,0:38:99:0,102,1354	0/0:25,0:25:57.62:0,58,695	0/1:7,6:11:0.94:273,0,1	1/1:11,20:31:4.65:77,5,0	1/1:25,13:37:18.61:386,19,0	1/1:8,14:22:17.62:177,18,0	0/0:16,0:16:33.10:0,33,480	0/0:38,0:38:72.12:0,72,982	0/1:10,16:25:44.46:46,0,44	1/1:14,14:27:74.15:1084,74,0	1/1:6,13:17:25.24:501,25,0	1/1:2,6:8:24.02:383,24,0
chr10	83571983	.	CAT	C	444.16	PASS	AB=0.979;AC=12;AF=0.214;AN=56;BaseQRankSum=5.020;DP=661;FS=0.518;HRun=0;HaplotypeScore=175.8524;InbreedingCoeff=-0.0510;MQ=45.86;MQ0=19;MQRankSum=0.135;QD=1.87;ReadPosRankSum=-6.089;VQSLOD=0.3002;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:27.93:0,28,278	0/0:8,0:8:24.05:0,24,372	0/0:60,0:15:29.99:0,30,362	0/0:45,0:7:17.98:0,18,258	0/1:16,1:17:4.14:65,0,4	0/0:18,0:18:45.02:0,45,788	0/0:20,0:20:32.96:0,33,456	0/1:27,1:23:95.85:155,0,96	0/0:12,0:11:30.02:0,30,494	0/0:27,0:27:46.79:0,47,1157	0/0:18,0:18:21.36:0,21,616	0/1:13,1:13:7.35:7,0,543	0/1:15,0:15:19.47:19,0,36	0/1:13,0:13:12.26:32,0,12	0/0:11,0:11:24.07:0,24,429	0/0:11,0:11:33.09:0,33,569	0/0:41,0:41:90.42:0,90,1619	0/0:26,0:26:24.28:0,24,806	0/1:13,0:11:22.17:60,0,22	0/1:27,0:27:18.88:19,0,36	0/1:46,1:46:50.77:51,0,101	1/1:16,1:17:1.85:31,2,0	0/0:15,0:15:13.11:0,13,573	0/0:45,0:45:37.22:0,37,1271	0/1:26,1:26:8.59:84,0,9	0/0:30,1:30:76.94:0,77,902	0/1:19,0:17:47.92:68,0,48	0/0:8,0:8:8:0,8,231
chr10	83571985	.	T	TACAC	1520.20	PASS	AB=0.795;AC=17;AF=0.304;AN=56;BaseQRankSum=7.991;DP=671;FS=21.404;HRun=0;HaplotypeScore=193.9007;InbreedingCoeff=0.6718;MQ=45.95;MQ0=23;MQRankSum=-5.002;QD=6.76;ReadPosRankSum=-4.678;VQSLOD=0.2589;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:31.19:0,31,394	0/0:8,0:8:21.05:0,21,304	0/0:63,0:15:3.54:0,4,143	0/0:43,0:6:2.67:0,3,71	1/1:11,6:17:11.70:159,12,0	0/0:19,0:19:39.03:0,39,668	0/0:20,0:20:41.60:0,42,454	0/1:24,0:23:96.76:219,0,97	0/0:13,0:12:24.06:0,24,382	0/0:28,0:29:63.11:0,63,1000	0/0:16,0:17:38.11:0,38,728	0/0:14,0:13:33.10:0,33,545	1/1:6,9:15:14.49:309,14,0	1/1:3,10:13:7.53:155,8,0	0/0:11,0:11:21.06:0,21,336	0/0:11,0:11:27.09:0,27,462	0/0:39,0:40:99:0,102,1588	0/0:26,0:26:41.40:0,41,889	1/1:10,0:12:12.13:221,12,0	0/1:6,0:27:2.18:2,0,10	0/1:43,0:46:8.25:111,0,8	1/1:7,10:17:3.01:43,3,0	0/0:15,0:15:34:0,34,564	0/0:45,0:45:63.93:0,64,1314	1/1:11,16:26:10.98:162,11,0	0/0:30,0:29:80.83:0,81,903	1/1:8,0:19:28.09:323,28,0	0/0:8,0:8:21.02:0,21,236
chr10	83572006	.	GCA	G	4885.25	PASS	AB=0.819;AC=30;AF=0.536;AN=56;BaseQRankSum=10.702;DP=705;FS=4.045;HRun=0;HaplotypeScore=157.3075;InbreedingCoeff=0.6563;MQ=49.31;MQ0=21;MQRankSum=-1.375;QD=12.37;ReadPosRankSum=-1.020;VQSLOD=4.6166;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:30:35.66:455,36,0	0/1:5,1:6:22.74:23,0,184	0/0:54,0:15:22.04:0,22,293	0/0:47,0:9:23.99:0,24,295	1/1:3,13:16:12.15:179,12,0	0/0:25,1:26:22.43:0,22,858	1/1:8,10:18:21:265,21,0	1/1:6,24:29:72.11:856,72,0	0/0:10,0:10:21.07:0,21,349	0/1:26,2:28:3.48:3,0,888	0/0:26,0:26:75.20:0,75,1138	0/0:15,1:16:1.38:0,1,522	1/1:7,7:14:11.58:143,12,0	1/1:5,9:14:6.74:140,7,0	0/0:11,0:11:21.07:0,21,344	0/0:11,0:11:21.07:0,21,335	0/0:41,1:42:40.73:0,41,1479	0/1:27,2:29:30.35:30,0,818	1/1:5,12:16:32.91:357,33,0	1/1:8,20:28:5.85:77,6,0	1/1:5,48:53:40.07:493,40,0	1/1:7,12:19:5.09:107,5,0	0/0:18,1:19:2.23:0,2,549	0/0:48,0:48:99:0,111,1810	0/1:5,23:27:0.07:201,0,0	1/1:5,24:28:72.22:892,72,0	1/1:5,17:20:33.10:415,33,0	1/1:5,8:10:21.05:249,21,0
chr10	83572797	.	AACAT	A	6900.93	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.571;DP=808;FS=14.888;HRun=0;HaplotypeScore=131.8573;InbreedingCoeff=0.9999;MQ=75.63;MQ0=0;MQRankSum=-8.586;QD=52.68;ReadPosRankSum=0.151;VQSLOD=5.3680;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:70,0:70:99:0,211,5851	0/0:11,0:11:33.11:0,33,943	0/0:32,0:31:93.32:0,93,2664	0/0:27,0:25:75.25:0,75,1946	0/0:33,0:33:99:0,99,2846	0/0:16,0:16:48.16:0,48,1349	0/0:30,0:30:87.26:0,87,2435	1/1:0,31:25:66.22:1274,66,0	0/0:39,0:39:99:0,117,3330	0/0:33,0:33:96.32:0,96,2613	0/0:15,0:15:42.14:0,42,1217	0/0:21,0:21:63.20:0,63,1745	0/0:31,0:31:93.32:0,93,2671	0/0:37,0:37:99:0,111,3102	0/0:31,0:31:90.31:0,90,2588	0/0:33,0:33:99:0,99,2869	0/0:34,0:34:99:0,99,2847	0/0:21,0:21:63.17:0,63,1758	1/1:0,14:12:36.06:672,36,0	1/1:1,28:29:78.27:1634,78,0	1/1:0,30:30:78.27:1624,78,0	0/0:22,0:22:63.22:0,63,1813	0/0:23,0:23:69.24:0,69,1966	0/0:33,0:33:93.32:0,93,2643	0/0:25,0:25:75.26:0,75,2132	0/0:37,0:37:99:0,111,3209	1/1:0,27:27:81.28:1697,81,0	0/0:23,0:23:69.24:0,69,1999
chr10	83573498	.	G	GT	4759.45	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=12.172;DP=404;FS=9.491;HRun=3;HaplotypeScore=80.9798;InbreedingCoeff=0.9773;MQ=59.71;MQ0=5;MQRankSum=-8.160;QD=24.79;ReadPosRankSum=-0.208;VQSLOD=3.2482;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:18:37.37:263,37,0	0/0:3,0:3:9.03:0,9,108	0/0:34,0:12:16.70:0,17,188	0/0:22,0:13:20.86:0,21,242	1/1:4,7:11:25.61:299,26,0	0/0:15,0:15:45.14:0,45,537	1/1:10,0:10:29.38:205,29,0	1/1:5,13:16:43.02:540,43,0	0/0:9,0:9:27.08:0,27,319	0/0:17,0:17:45.13:0,45,530	0/0:15,0:15:42.11:0,42,481	0/0:7,0:7:15.04:0,15,179	1/1:1,9:10:24.03:295,24,0	1/1:1,7:13:33.06:379,33,0	0/0:15,0:15:45.11:0,45,521	0/0:5,0:5:15.04:0,15,173	0/0:19,0:19:57.13:0,57,663	0/0:12,0:12:36.08:0,36,413	1/1:9,11:18:42.04:495,42,0	1/1:6,16:22:63.13:757,63,0	1/1:2,13:14:15.05:186,15,0	1/1:1,6:7:15.05:190,15,0	0/0:14,0:14:38.91:0,39,441	0/0:25,0:25:72.01:0,72,798	1/1:1,10:11:21.04:251,21,0	1/1:17,0:17:46.68:303,47,0	1/1:3,11:14:42.13:520,42,0	1/1:5,0:5:14.16:76,14,0
chr10	83573501	.	T	TTG	7830.61	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=10.748;DP=411;FS=9.248;HRun=0;HaplotypeScore=79.7412;InbreedingCoeff=0.9812;MQ=60.29;MQ0=5;MQRankSum=-8.857;QD=41.00;ReadPosRankSum=0.252;VQSLOD=6.1829;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:18:30.82:819,31,0	0/0:3,0:3:9.03:0,9,147	0/0:34,0:10:24.04:0,24,320	0/0:24,0:14:23.16:0,23,303	1/1:11,0:11:29.94:439,30,0	0/0:16,0:16:48.16:0,48,758	1/1:3,8:11:30.09:550,30,0	1/1:18,0:16:44.68:624,45,0	0/0:10,0:10:27.09:0,27,432	0/0:16,0:16:48.12:0,48,752	0/0:15,0:15:45.13:0,45,687	0/0:6,0:6:18.03:0,18,264	1/1:10,0:10:23.87:386,24,0	1/1:13,0:13:33.11:535,33,0	0/0:16,0:16:45.15:0,45,732	0/0:7,0:7:18.05:0,18,260	0/0:21,0:21:60.19:0,60,940	0/0:12,0:12:36.12:0,36,585	1/1:20,0:18:47.40:623,47,0	1/1:22,0:22:65.96:1079,66,0	1/1:12,0:11:14.92:234,15,0	1/1:6,0:6:15.05:247,15,0	0/0:14,0:14:42.03:0,42,624	0/0:25,0:25:75.24:0,75,1157	1/1:11,0:11:19.88:324,20,0	1/1:2,15:17:48.16:952,48,0	1/1:15,0:15:42.10:723,42,0	1/1:2,4:6:14.94:294,15,0
chr10	83573502	.	G	GT	3524.34	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=10.782;DP=426;FS=6.792;HRun=5;HaplotypeScore=90.4769;InbreedingCoeff=0.7401;MQ=59.72;MQ0=5;MQRankSum=-7.828;QD=19.47;ReadPosRankSum=-0.601;VQSLOD=2.6729;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:18:13.76:18,0,14	0/0:3,0:3:9.02:0,9,97	0/0:35,0:11:22.56:0,23,212	0/0:26,0:14:0.85:0,1,127	1/1:2,10:12:27.06:316,27,0	0/0:18,0:18:41.79:0,42,416	0/1:10,0:10:14.80:15,0,18	1/1:9,11:18:39.69:404,40,0	0/0:12,0:12:23.97:0,24,239	0/0:16,0:16:48.11:0,48,502	0/0:14,0:14:39.07:0,39,402	0/0:6,0:6:15.04:0,15,160	1/1:5,6:11:27.03:295,27,0	1/1:7,6:13:33.04:346,33,0	0/0:16,0:16:48.11:0,48,506	0/0:7,0:7:17.95:0,18,163	0/0:21,0:21:48.54:0,49,535	0/0:14,0:14:30.07:0,30,320	1/1:8,13:19:39.05:434,39,0	1/1:5,17:22:59.54:666,60,0	1/1:7,5:11:12.50:129,13,0	1/1:3,4:7:14.91:160,15,0	0/0:14,0:14:41.84:0,42,423	0/0:25,0:25:64.62:0,65,618	1/1:5,6:11:21.04:244,21,0	0/0:17,0:17:3.15:0,3,10	1/1:8,9:17:46.88:477,47,0	0/1:6,0:6:2.80:20,0,3
chr10	83573508	.	G	GT	1212.49	PASS	AB=0.930;AC=25;AF=0.446;AN=56;BaseQRankSum=8.712;DP=426;FS=1.005;HRun=15;HaplotypeScore=93.5092;InbreedingCoeff=0.5367;MQ=61.20;MQ0=6;MQRankSum=-9.122;QD=4.91;ReadPosRankSum=-0.028;VQSLOD=2.3423;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:21:19.65:79,20,0	0/0:4,0:4:8.82:0,9,54	0/0:41,0:12:24.31:0,24,128	0/1:27,0:12:1.61:10,0,2	0/0:11,0:11:7.79:0,8,50	0/0:15,1:17:15.10:0,15,195	1/1:10,0:10:18.75:76,19,0	1/1:20,0:18:26.27:145,26,0	0/0:11,0:11:26.31:0,26,157	0/0:18,0:19:34.16:0,34,202	0/0:14,0:15:8.23:0,8,144	0/0:7,0:7:14.63:0,15,89	0/1:9,1:10:27.09:27,0,35	0/1:14,0:14:8.85:9,0,21	0/0:16,0:16:23.32:0,23,143	0/1:5,2:8:27.51:37,0,28	0/1:17,1:21:2.88:3,0,164	0/0:12,0:13:21.12:0,21,115	1/1:18,0:16:34.13:184,34,0	1/1:22,0:22:58.17:337,58,0	1/1:8,0:7:10.91:46,11,0	0/1:6,0:6:2.88:3,0,7	0/0:16,0:16:30.77:0,31,179	0/1:17,4:22:48.49:48,0,187	0/0:9,0:9:14.02:0,14,49	1/1:17,0:17:35.40:140,35,0	1/1:17,0:17:38.01:226,38,0	1/1:5,0:5:8.33:44,8,0
chr10	83573513	.	T	TTGG	2368.93	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=2.832;DP=432;FS=15.920;HRun=0;HaplotypeScore=102.9563;InbreedingCoeff=0.9238;MQ=63.06;MQ0=6;MQRankSum=-6.793;QD=35.89;ReadPosRankSum=-0.402;VQSLOD=2.9250;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,9:21:57.07:872,57,0	0/0:3,0:3:9.03:0,9,155	0/0:44,0:13:16.79:0,17,372	0/0:30,0:13:11.05:0,11,176	0/0:12,0:12:31.65:0,32,450	0/0:16,0:16:45.14:0,45,729	1/1:3,8:11:27.09:516,27,0	0/0:22,0:20:48.80:0,49,346	0/0:12,0:12:30.10:0,30,504	0/0:18,0:18:54.18:0,54,875	0/0:15,0:15:42.12:0,42,639	0/0:8,0:8:24.06:0,24,356	0/0:10,0:10:24.02:0,24,327	0/0:14,0:14:36.08:0,36,533	0/0:14,0:14:42.14:0,42,684	0/0:8,0:8:24.05:0,24,321	0/0:21,0:21:63.18:0,63,950	0/0:13,0:13:33.10:0,33,502	0/0:18,0:16:39.96:0,40,250	0/0:23,0:23:49.37:0,49,341	1/1:6,0:8:11.94:116,12,0	0/0:6,0:6:18.06:0,18,266	0/0:15,0:15:45.15:0,45,726	0/0:21,0:21:63.15:0,63,935	0/0:7,0:7:21.07:0,21,336	1/1:6,13:19:4.98:858,5,0	0/0:16,0:16:39.39:0,39,214	1/1:3,2:5:10.97:170,11,0
chr10	83573515	.	T	TG	2069.96	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=2.722;DP=426;FS=8.310;HRun=0;HaplotypeScore=86.7630;InbreedingCoeff=0.6986;MQ=62.58;MQ0=6;MQRankSum=-6.690;QD=17.84;ReadPosRankSum=-1.463;VQSLOD=5.4215;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:20:57.96:58,0,95	0/0:3,0:3:9.03:0,9,125	0/0:43,0:13:32.37:0,32,358	0/0:28,0:12:12.05:0,12,112	0/0:10,0:10:29.78:0,30,284	0/0:17,0:17:38.75:0,39,538	0/1:11,0:11:0:0,0,32	1/1:5,17:20:32.99:456,33,0	0/0:11,0:11:33.06:0,33,418	0/0:18,0:18:54.09:0,54,644	0/0:14,0:14:37.87:0,38,452	0/0:9,0:9:23.99:0,24,278	0/0:10,0:10:22.53:0,23,219	0/0:15,0:15:36.90:0,37,346	0/0:14,0:14:42.06:0,42,488	0/0:8,0:8:20.49:0,20,187	0/0:21,0:21:59.22:0,59,657	0/0:11,0:11:32.96:0,33,351	1/1:1,15:16:40.36:466,40,0	1/1:3,21:24:69.10:783,69,0	0/0:9,0:8:13.51:0,14,61	0/0:6,0:6:17.93:0,18,147	0/0:15,0:15:45.08:0,45,543	0/0:22,0:22:57.21:0,57,667	0/0:7,0:7:21.01:0,21,220	0/0:18,0:18:22.07:0,22,143	1/1:1,17:18:36.62:461,37,0	0/1:4,0:4:9.86:13,0,10
chr10	83573707	.	C	CA	1066.11	PASS	AB=0.790;AC=21;AF=0.375;AN=56;BaseQRankSum=-1.943;DP=504;FS=4.683;HRun=14;HaplotypeScore=75.0398;InbreedingCoeff=0.4192;MQ=75.32;MQ0=6;MQRankSum=1.336;QD=4.91;ReadPosRankSum=-3.449;VQSLOD=1.4419;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:21:6.90:7,0,82	0/0:9,0:10:19.72:0,20,121	0/0:41,1:24:1:0,1,53	0/0:40,0:17:20.07:0,20,126	1/1:8,9:20:16.84:237,17,0	0/1:10,0:12:0.50:1,0,50	0/0:12,0:13:16.72:0,17,102	1/1:11,9:20:26.98:230,27,0	0/0:21,0:21:24.48:0,24,168	0/0:22,0:22:29.32:0,29,191	0/0:11,0:12:13.70:0,14,83	0/0:11,0:12:8.95:0,9,59	1/1:2,10:12:2.94:26,3,0	0/1:6,5:11:7.54:43,0,8	0/0:16,0:17:20.39:0,20,134	0/0:9,0:12:7.73:0,8,44	0/0:24,0:26:6.51:0,7,152	0/0:20,0:22:28.48:0,28,178	1/1:10,9:20:6.09:268,6,0	1/1:8,10:18:11.88:88,12,0	0/1:7,3:10:3.39:87,0,3	0/1:6,6:12:6.44:87,0,6	0/0:14,0:19:27.82:0,28,145	0/0:14,0:15:28.51:0,29,174	0/1:13,5:19:10.27:44,0,10	1/1:7,0:15:11.51:65,12,0	0/1:11,9:20:39.78:47,0,40	1/1:0,0:6:2.84:14,3,0
chr10	83574547	.	CTCTCATCTCATCT	C	14105.24	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.449;DP=572;FS=0.376;HRun=0;HaplotypeScore=230.3664;InbreedingCoeff=0.9961;MQ=93.35;MQ0=0;MQRankSum=-15.718;QD=80.14;ReadPosRankSum=1.826;VQSLOD=4.6289;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.29:0,84,5042	0/0:8,0:8:21.07:0,21,1322	0/0:21,0:21:44.36:0,44,2609	0/0:38,0:37:93.28:0,93,4657	1/1:6,21:27:48.16:1857,48,0	0/0:15,0:15:36.12:0,36,2227	0/0:17,0:17:45.14:0,45,2517	1/1:10,13:21:33.08:966,33,0	0/0:28,0:28:75.26:0,75,4673	0/0:14,0:14:42.14:0,42,2654	0/0:22,0:22:66.23:0,66,4257	0/0:20,0:20:51.18:0,51,3197	1/1:1,13:14:36.12:1395,36,0	1/1:2,17:19:45.15:1740,45,0	0/0:25,0:25:69.24:0,69,4289	0/0:18,0:18:42.14:0,42,2552	0/0:18,0:18:48.16:0,48,3003	0/0:8,0:8:18.06:0,18,1149	1/1:4,6:10:18.06:630,18,0	1/1:2,23:25:66.23:2556,66,0	0/0:27,0:27:66.23:0,66,3942	1/1:3,16:19:42.14:1613,42,0	0/0:23,0:23:63.22:0,63,3940	0/0:18,0:18:54.19:0,54,3355	1/1:1,7:8:21.07:813,21,0	0/0:28,0:28:81.28:0,81,5248	1/1:9,22:31:66.23:2537,66,0	0/0:18,0:18:51.18:0,51,3249
chr10	83574788	.	A	ATATCC	6865	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-6.679;DP=644;FS=11.689;HRun=0;HaplotypeScore=120.5817;InbreedingCoeff=0.9822;MQ=85.13;MQ0=0;MQRankSum=-7.293;QD=66.65;ReadPosRankSum=0.082;VQSLOD=5.1708;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,32:41:87.30:2693,87,0	0/0:7,0:7:21.05:0,21,402	0/0:20,0:20:51.13:0,51,975	0/0:24,0:24:72.14:0,72,1366	0/0:24,0:24:63.20:0,63,1238	0/0:25,0:25:66.21:0,66,1347	1/1:6,15:21:48.12:1355,48,0	0/0:21,0:21:60.19:0,60,1177	0/0:32,0:32:93.32:0,93,1939	0/0:23,0:23:60.21:0,60,1253	0/0:21,0:20:54.19:0,54,1111	0/0:25,0:25:72.23:0,72,1459	0/0:18,0:18:54.19:0,54,1134	0/0:21,0:21:57.17:0,57,1108	0/0:28,0:28:81.28:0,81,1701	0/0:22,0:22:63.22:0,63,1322	0/0:23,0:23:66.19:0,66,1306	0/0:22,0:22:63.22:0,63,1287	0/0:21,0:21:63.22:0,63,1323	0/0:18,0:18:54.16:0,54,1007	0/0:32,0:32:90.29:0,90,1820	0/0:24,0:24:72.25:0,72,1498	0/0:10,0:10:27.09:0,27,566	0/0:27,0:27:78.27:0,78,1636	0/0:20,0:20:54.19:0,54,1133	1/1:9,24:34:45.54:2538,46,0	0/0:33,0:33:99:0,99,2031	1/1:3,3:6:9.03:278,9,0
chr10	83575189	.	TGG	T	1804.07	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=2.346;DP=422;FS=2.461;HRun=10;HaplotypeScore=64.5970;InbreedingCoeff=0.8797;MQ=86.27;MQ0=0;MQRankSum=-0.584;QD=21.22;ReadPosRankSum=4.852;VQSLOD=2.7581;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:14:12.49:0,12,122	0/0:9,0:9:21.06:0,21,311	0/0:21,0:20:0.97:0,1,378	0/0:22,0:21:32.84:0,33,362	1/1:2,13:15:42.07:452,42,0	0/0:9,0:9:24.07:0,24,359	0/1:7,0:10:0.24:0,0,20	0/0:12,0:20:36.06:0,36,452	0/0:12,0:12:31.89:0,32,436	0/0:14,0:14:27.09:0,27,429	0/0:16,0:16:36.09:0,36,488	0/0:13,0:13:27.09:0,27,425	1/1:2,10:12:21.05:234,21,0	1/1:1,11:12:33.08:368,33,0	0/0:14,0:14:24.06:0,24,341	0/0:12,0:13:32.60:0,33,483	0/0:14,0:14:39.13:0,39,618	0/0:16,0:16:45.15:0,45,714	0/0:12,0:17:24.03:0,24,261	0/0:14,0:16:18.04:0,18,238	0/0:13,0:14:26.55:0,27,343	1/1:6,15:21:45.11:501,45,0	0/0:16,0:16:33.10:0,33,489	0/0:14,0:14:30.10:0,30,471	1/1:2,13:15:39.06:421,39,0	0/0:15,0:15:35.99:0,36,329	0/0:8,0:27:29.97:0,30,286	0/0:11,0:11:24:0,24,207
chr10	83575194	.	G	GGGA	1067.19	PASS	AB=0.769;AC=4;AF=0.071;AN=56;BaseQRankSum=-6.227;DP=401;FS=0.000;HRun=0;HaplotypeScore=76.7952;InbreedingCoeff=0.5107;MQ=84.33;MQ0=0;MQRankSum=-2.969;QD=31.39;ReadPosRankSum=2.392;VQSLOD=3.9808;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:7:3.37:3,0,66	0/0:10,0:10:29.60:0,30,372	0/0:25,0:24:56.44:0,56,587	0/0:19,0:18:15.97:0,16,409	0/0:16,0:16:47.92:0,48,412	0/0:11,0:11:33.03:0,33,434	0/0:9,0:9:6.47:0,6,53	0/0:21,0:21:47.49:0,47,401	0/0:11,0:11:32.97:0,33,437	0/0:14,0:14:36.10:0,36,522	0/0:16,0:16:43.31:0,43,496	0/0:12,0:12:33.06:0,33,420	0/0:12,0:12:24.01:0,24,214	0/0:12,0:12:33.02:0,33,296	0/0:12,0:12:23.90:0,24,334	0/0:13,0:13:39.08:0,39,524	0/0:14,0:14:42.12:0,42,638	0/0:15,0:15:45.15:0,45,729	0/0:15,0:15:35.67:0,36,284	0/0:13,0:13:23.61:0,24,175	0/0:12,0:12:33.06:0,33,420	0/0:20,0:20:48.01:0,48,426	0/0:12,0:12:33.03:0,33,415	0/0:13,0:13:35.71:0,36,424	0/0:15,0:14:41.95:0,42,366	0/1:2,10:14:9.73:668,0,10	0/0:25,0:25:36.65:0,37,221	1/1:0,12:13:24.08:504,24,0
chr10	83578736	.	G	GC	189.06	PASS	AB=1.000;AC=11;AF=0.550;AN=20;BaseQRankSum=3.707;DP=519;FS=22.194;HRun=0;HaplotypeScore=8.7672;InbreedingCoeff=0.5562;MQ=21.67;MQ0=83;MQRankSum=3.191;QD=1.77;ReadPosRankSum=0.166;VQSLOD=0.1307;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/0:13,0:7:3.01:0,3,42	./.	1/1:10,2:6:6.02:96,6,0	./.	./.	0/0:17,0:12:33.11:0,33,461	./.	./.	1/1:12,1:10:3.01:48,3,0	1/1:15,1:10:3.01:48,3,0	./.	1/1:14,2:12:2.77:48,3,0	1/1:26,2:24:3.01:48,3,0	./.	0/0:31,0:11:24.03:0,24,312	0/1:22,0:15:0:0,0,0	./.	./.	./.	./.	./.	0/0:23,0:17:45.15:0,45,629	./.	./.
chr10	83579760	.	AAT	A	1921.16	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=4.465;DP=377;FS=2.415;HRun=0;HaplotypeScore=55.7908;InbreedingCoeff=0.7495;MQ=60.38;MQ0=9;MQRankSum=1.095;QD=15.25;ReadPosRankSum=-1.504;VQSLOD=2.9351;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:13.14:114,0,13	0/0:6,0:6:14.98:0,15,205	0/0:14,0:5:11.82:0,12,113	0/0:9,0:3:8.85:0,9,64	0/0:24,0:23:32.37:0,32,184	0/0:11,0:11:27.08:0,27,451	1/1:13,0:13:4.66:67,5,0	1/1:2,17:17:47.75:508,48,0	0/0:15,0:15:39.03:0,39,637	0/0:18,0:18:54.18:0,54,985	0/0:17,0:17:45.12:0,45,758	0/0:10,0:9:27.07:0,27,421	0/0:6,0:6:12.35:0,12,43	0/0:12,0:12:25.13:0,25,94	0/0:9,0:9:27.07:0,27,445	0/0:6,0:6:14.97:0,15,211	0/0:16,0:14:42.14:0,42,789	0/0:17,0:17:51.14:0,51,869	1/1:1,8:8:21.02:263,21,0	1/1:2,14:12:27.04:364,27,0	1/1:0,8:8:18.06:257,18,0	0/0:12,0:12:8.83:0,9,67	0/0:10,0:10:30.10:0,30,540	0/0:16,0:16:45.11:0,45,745	0/0:15,0:15:30.16:0,30,114	0/1:13,0:13:14.18:14,0,55	1/1:0,17:16:36.12:520,36,0	0/0:8,0:8:14.43:0,14,55
chr10	83579761	.	AT	A	2737.78	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=10.265;DP=375;FS=3.674;HRun=10;HaplotypeScore=47.4855;InbreedingCoeff=0.9737;MQ=60.52;MQ0=9;MQRankSum=-0.790;QD=13.69;ReadPosRankSum=1.679;VQSLOD=3.4151;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:29:38.70:115,39,0	0/0:6,0:6:12.02:0,12,123	0/0:14,0:5:11.70:0,12,94	0/0:9,0:3:8.85:0,9,58	1/1:3,20:23:65.95:566,66,0	0/0:11,0:11:21.06:0,21,231	1/1:2,0:13:18.30:54,18,0	1/1:19,0:17:35.14:217,35,0	0/0:15,0:15:33.06:0,33,351	0/0:18,0:18:54.14:0,54,587	0/0:17,0:17:42.08:0,42,444	0/0:10,0:9:24.01:0,24,241	1/1:0,6:6:15:130,15,0	1/1:1,11:12:26.99:234,27,0	0/0:9,0:9:24.05:0,24,255	0/0:7,0:7:15.01:0,15,147	0/0:16,0:14:42.11:0,42,462	0/0:17,0:17:45.11:0,45,487	1/1:9,0:8:20.49:126,20,0	1/1:16,0:12:26.15:145,26,0	1/1:8,0:8:17.33:93,17,0	1/1:0,12:12:32.95:279,33,0	0/0:10,0:10:30.08:0,30,328	0/0:16,0:16:42.07:0,42,442	1/1:1,14:15:32.99:285,33,0	1/1:0,13:13:38.95:327,39,0	1/1:17,0:16:34.80:190,35,0	1/1:0,8:8:23.99:206,24,0
chr10	83580107	.	ACT	A	2441.02	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.617;DP=614;FS=7.782;HRun=0;HaplotypeScore=77.3878;InbreedingCoeff=0.9977;MQ=88.71;MQ0=0;MQRankSum=-4.276;QD=37.55;ReadPosRankSum=0.739;VQSLOD=5.5373;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,41:42:99:1679,114,0	0/0:12,0:12:36.12:0,36,666	0/0:17,0:17:45.15:0,45,800	0/0:28,0:28:75.19:0,75,1242	0/0:25,0:25:75.26:0,75,1346	0/0:19,0:19:57.20:0,57,1067	1/1:1,22:23:60.20:884,60,0	0/0:16,0:16:45.15:0,45,812	0/0:17,0:17:51.17:0,51,944	0/0:23,0:23:66.23:0,66,1233	0/0:17,0:17:45.15:0,45,824	0/0:15,0:15:45.15:0,45,843	0/0:14,0:14:42.14:0,42,757	0/0:23,0:23:69.24:0,69,1277	0/0:21,0:21:63.22:0,63,1173	0/0:22,0:22:66.23:0,66,1236	0/0:25,0:25:75.25:0,75,1374	0/0:20,0:20:60.16:0,60,1087	0/0:25,0:25:69.24:0,69,1285	0/0:22,0:22:63.20:0,63,1126	0/0:39,0:39:99:0,114,2112	0/0:25,0:25:72.25:0,72,1327	0/0:23,0:23:66.23:0,66,1228	0/0:30,0:30:87.30:0,87,1620	0/0:12,0:12:36.12:0,36,661	0/0:29,0:29:87.30:0,87,1622	0/0:20,0:20:60.21:0,60,1124	0/0:10,0:10:21.07:0,21,393
chr10	83580305	.	TA	T	2756.47	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=17.795;DP=600;FS=10.938;HRun=7;HaplotypeScore=71.1378;InbreedingCoeff=0.9800;MQ=74.28;MQ0=0;MQRankSum=-1.806;QD=12.42;ReadPosRankSum=3.425;VQSLOD=1.6403;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:46,0:46:99:614,105,0	0/0:6,0:6:18.06:0,18,226	0/0:19,0:19:46.58:0,47,527	0/0:14,0:13:19.35:0,19,287	1/1:25,0:25:37.51:334,38,0	0/0:30,0:30:87.25:0,87,1078	1/1:13,0:13:7.26:136,7,0	0/0:29,0:29:69.21:0,69,846	0/0:13,0:13:33.11:0,33,415	0/0:22,0:22:56.95:0,57,716	0/0:29,0:29:78.23:0,78,957	0/0:11,0:11:33.11:0,33,415	1/1:21,0:21:11.68:237,12,0	1/1:20,0:20:43.46:248,43,0	0/0:19,0:19:54.17:0,54,668	0/0:21,0:21:63.20:0,63,793	0/0:27,0:27:75.20:0,75,914	0/0:17,0:17:48.15:0,48,604	0/0:31,0:31:65.67:0,66,950	0/0:24,0:24:63.18:0,63,766	1/1:1,14:15:33.07:337,33,0	1/1:17,0:17:40.72:231,41,0	0/0:20,0:20:54.17:0,54,679	0/0:16,0:16:42.13:0,42,526	1/1:19,0:19:46.11:248,46,0	1/1:25,0:25:22.26:249,22,0	0/0:30,0:30:87.23:0,87,1068	1/1:21,0:21:55.73:342,56,0
chr10	83580312	.	AG	A	7181.24	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.016;DP=579;FS=11.410;HRun=1;HaplotypeScore=55.7888;InbreedingCoeff=0.9985;MQ=77.29;MQ0=0;MQRankSum=-2.345;QD=33.87;ReadPosRankSum=4.016;VQSLOD=3.6778;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:42:99:1503,108,0	0/0:7,0:7:21.04:0,21,273	0/0:19,0:19:54.85:0,55,754	0/0:11,0:10:24.54:0,25,336	1/1:0,28:28:72.14:925,72,0	0/0:29,0:29:87.28:0,87,1281	1/1:0,13:13:29.61:418,30,0	0/0:25,0:25:75.22:0,75,1050	0/0:11,0:11:33.11:0,33,494	0/0:19,0:19:57.19:0,57,853	0/0:29,0:29:78.24:0,78,1124	0/0:11,0:11:33.10:0,33,474	1/1:0,21:21:51.13:710,51,0	1/1:0,16:16:45.15:620,45,0	0/0:19,0:19:57.18:0,57,832	0/0:23,0:23:69.21:0,69,990	0/0:25,0:25:75.25:0,75,1103	0/0:21,0:21:63.10:0,63,822	0/0:30,0:30:70.04:0,70,1202	0/0:22,0:22:66.21:0,66,965	1/1:14,0:14:22.59:63,23,0	1/1:0,15:15:42.14:585,42,0	0/0:22,0:22:63.17:0,63,873	0/0:14,0:14:42.14:0,42,628	1/1:0,16:16:48.16:669,48,0	1/1:1,25:26:33.08:896,33,0	0/0:30,0:30:90.29:0,90,1316	1/1:0,21:21:57.19:792,57,0
chr10	83580947	.	A	AG	13033.36	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=9.615;DP=631;FS=1.314;HRun=1;HaplotypeScore=83.3544;InbreedingCoeff=0.9984;MQ=87.33;MQ0=0;MQRankSum=-1.963;QD=40.10;ReadPosRankSum=-1.846;VQSLOD=4.6235;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,46:47:99:1932,129,0	0/0:6,0:6:18.06:0,18,234	0/0:26,0:25:63.03:0,63,693	0/0:20,0:20:27.93:0,28,463	1/1:0,16:16:48.16:718,48,0	0/0:14,0:14:42.14:0,42,545	1/1:2,20:22:54.18:809,54,0	1/1:0,20:20:57.16:830,57,0	0/0:30,0:30:87.27:0,87,1116	0/0:22,0:22:66.21:0,66,857	0/0:24,0:24:69.20:0,69,867	0/0:17,0:17:51.17:0,51,659	1/1:1,21:22:60.08:893,60,0	1/1:1,29:30:78.26:1169,78,0	0/0:17,0:17:45.15:0,45,584	0/0:19,0:19:54.14:0,54,683	0/0:14,0:14:42.14:0,42,545	0/0:10,0:10:30.05:0,30,355	1/1:3,19:22:63.13:853,63,0	1/1:1,29:30:87.25:1277,87,0	0/0:48,0:48:99:0,141,1788	1/1:1,33:34:96.24:1410,96,0	0/0:22,0:22:63.19:0,63,804	0/0:17,0:17:51.15:0,51,647	1/1:1,17:18:42.14:629,42,0	1/1:1,26:27:39.26:1040,39,0	1/1:1,27:28:78.13:1114,78,0	1/1:0,9:9:24.08:359,24,0
chr10	83581742	.	AAAAAGAAGGTCAGGGCCAT	A	920.36	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.235;DP=571;FS=6.037;HRun=0;HaplotypeScore=277.9889;InbreedingCoeff=0.8547;MQ=75.15;MQ0=0;MQRankSum=-3.391;QD=20.92;ReadPosRankSum=-0.558;VQSLOD=1.6655;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,14:30:10.28:571,10,0	0/0:8,0:8:18.06:0,18,1277	0/0:18,0:18:10.27:0,10,249	0/0:16,0:15:6.93:0,7,178	0/0:33,0:33:66.23:0,66,3539	0/0:26,0:26:39.13:0,39,3270	1/1:8,6:14:9.03:456,9,0	0/0:32,0:32:48.16:0,48,2515	0/0:17,0:17:33.11:0,33,2648	0/0:18,0:18:36.12:0,36,2503	0/0:20,0:20:42.14:0,42,3381	0/0:11,0:11:27.09:0,27,2292	0/0:17,0:17:21.07:0,21,1292	0/0:8,0:8:15.05:0,15,1176	0/0:17,0:17:33.11:0,33,2732	0/0:14,0:14:27.08:0,27,1599	0/0:33,0:33:57.20:0,57,4636	0/0:15,0:15:30.10:0,30,2359	0/0:25,0:25:30.05:0,30,1630	0/0:29,0:29:60.21:0,60,3311	0/0:24,0:24:45.15:0,45,3615	0/0:35,0:35:75.26:0,75,4650	0/0:17,0:17:33.10:0,33,2196	0/0:11,0:11:18.06:0,18,1449	0/0:13,0:13:27.09:0,27,1838	0/0:25,0:25:42.14:0,42,3084	0/0:39,0:38:81.28:0,81,5332	0/0:6,0:6:15.05:0,15,1331
chr10	83583433	.	GCA	G	3026.54	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.919;DP=494;FS=9.201;HRun=0;HaplotypeScore=76.4116;InbreedingCoeff=0.9907;MQ=82.37;MQ0=0;MQRankSum=-3.369;QD=39.82;ReadPosRankSum=-0.970;VQSLOD=4.9395;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1958	0/0:15,0:15:42.13:0,42,764	0/0:24,0:24:63.11:0,63,1123	0/0:22,0:23:43.79:0,44,1062	0/0:17,0:17:51.17:0,51,977	0/0:17,0:17:51.16:0,51,950	0/0:20,0:20:57.20:0,57,1088	1/1:1,23:24:72.05:992,72,0	0/0:20,0:20:60.21:0,60,1157	0/0:13,0:13:39.13:0,39,753	0/0:11,0:11:30.09:0,30,546	0/0:16,0:16:48.16:0,48,926	0/0:18,0:18:54.19:0,54,1026	0/0:14,0:14:42.14:0,42,809	0/0:16,0:16:48.15:0,48,892	0/0:12,0:12:36.12:0,36,683	0/0:26,0:26:75.24:0,75,1353	0/0:12,0:12:36.06:0,36,621	1/1:0,22:22:66.22:1002,66,0	1/1:0,13:13:36.12:550,36,0	0/0:37,0:37:99:0,111,2100	0/0:15,0:15:45.13:0,45,781	0/0:9,0:9:27.09:0,27,513	0/0:12,0:12:36.11:0,36,647	0/0:10,0:10:30.10:0,30,579	0/0:21,0:21:63.22:0,63,1186	1/1:0,17:17:42.14:643,42,0	0/0:5,0:5:12.04:0,12,219
chr10	83583843	.	C	CT	302.23	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=-0.838;DP=370;FS=7.165;HRun=0;HaplotypeScore=109.1921;InbreedingCoeff=0.8399;MQ=51.53;MQ0=8;MQRankSum=-0.073;QD=13.14;ReadPosRankSum=2.209;VQSLOD=4.8650;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,14:23:21:394,21,0	0/0:6,0:6:17.54:0,18,213	0/0:19,0:7:4.67:0,5,84	./.	0/0:26,0:26:56.64:0,57,387	0/0:13,0:13:34.06:0,34,374	0/0:9,0:9:21.27:0,21,182	0/0:17,0:16:40.44:0,40,433	0/0:15,0:15:39.12:0,39,512	0/0:10,0:9:24.08:0,24,326	0/0:16,0:16:45.14:0,45,605	0/0:13,0:13:36.12:0,36,489	0/0:9,0:9:26.32:0,26,173	0/0:7,0:7:17.83:0,18,139	0/0:8,0:8:24.05:0,24,305	0/0:10,0:10:30.07:0,30,391	0/0:18,0:17:48.14:0,48,635	0/0:11,0:11:32.98:0,33,392	0/0:21,0:15:44.78:0,45,505	0/0:16,0:15:45.14:0,45,581	0/0:9,0:8:24.08:0,24,335	0/0:5,0:5:14.67:0,15,109	0/0:21,0:21:59.16:0,59,728	0/0:8,0:8:24.08:0,24,328	0/0:11,0:11:31.91:0,32,254	0/0:18,0:18:29.73:0,30,283	0/0:12,0:12:33.09:0,33,409	0/0:14,0:14:35.71:0,36,242
chr10	83583844	.	C	CA	1475.02	PASS	AB=0.934;AC=22;AF=0.407;AN=54;BaseQRankSum=1.511;DP=380;FS=6.271;HRun=11;HaplotypeScore=114.0979;InbreedingCoeff=0.3870;MQ=50.70;MQ0=8;MQRankSum=-2.513;QD=6.56;ReadPosRankSum=-0.556;VQSLOD=1.9623;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:47.82:455,48,0	0/1:6,1:7:15.46:15,0,78	0/1:19,0:7:1.92:2,0,57	./.	0/1:26,3:29:4.08:91,0,4	0/1:9,3:13:65.31:65,0,96	1/1:9,0:9:3.69:34,4,0	1/1:17,0:17:3.40:110,3,0	0/0:14,0:15:37.80:0,38,272	0/0:10,0:10:22.93:0,23,168	0/0:15,0:15:41.79:0,42,319	0/0:14,0:14:26.85:0,27,209	1/1:9,0:9:1.51:7,2,0	1/1:7,0:7:0.89:3,1,0	0/0:8,0:8:14.93:0,15,116	0/0:11,0:11:7.28:0,7,162	0/0:15,0:16:39.92:0,40,291	0/0:11,0:11:24.55:0,25,162	0/1:20,0:15:2.42:39,0,2	0/0:17,0:16:16.57:0,17,70	0/0:9,0:8:17.93:0,18,139	0/1:6,0:6:0.47:4,0,0	0/1:18,1:20:15.53:16,0,216	0/0:8,0:8:20.91:0,21,162	0/1:11,1:12:3.14:78,0,3	1/1:8,11:19:42.08:426,42,0	0/0:13,0:13:4.31:0,4,15	1/1:3,10:13:12.81:298,13,0
chr10	83583848	.	A	AC	357.53	PASS	AB=0.944;AC=8;AF=0.148;AN=54;BaseQRankSum=5.739;DP=374;FS=7.771;HRun=0;HaplotypeScore=119.8539;InbreedingCoeff=-0.0593;MQ=51.56;MQ0=7;MQRankSum=-3.541;QD=3.06;ReadPosRankSum=3.421;VQSLOD=2.4849;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:49.85:55,0,50	0/0:8,0:8:14:0,14,219	0/0:21,0:8:16.05:0,16,147	./.	0/1:26,4:30:20.10:223,0,20	0/0:12,0:12:5.95:0,6,241	0/0:9,0:9:14.80:0,15,104	0/0:20,0:19:4.72:0,5,255	0/0:15,0:15:42.05:0,42,517	0/0:12,0:11:29.99:0,30,352	0/0:15,0:15:45.11:0,45,595	0/0:15,0:15:44.97:0,45,510	0/1:6,3:9:29.77:30,0,47	0/1:6,0:6:0.11:22,0,0	0/0:6,0:6:18.02:0,18,228	0/0:10,0:10:30.05:0,30,380	0/0:16,0:15:45.01:0,45,540	0/0:10,0:10:30.01:0,30,343	0/0:17,0:13:30.65:0,31,263	0/0:16,0:15:42.02:0,42,407	0/0:8,0:7:21.06:0,21,277	0/1:5,0:5:13.40:37,0,13	0/0:18,0:18:46.75:0,47,560	0/0:8,0:8:24.04:0,24,310	0/1:11,1:12:46.10:46,0,75	0/1:20,0:20:38.56:43,0,39	0/0:15,0:15:35.73:0,36,311	0/1:13,0:13:34.88:35,0,41
chr10	83583853	.	AAAC	A	1984.87	PASS	AB=0.890;AC=15;AF=0.268;AN=56;BaseQRankSum=2.005;DP=369;FS=5.441;HRun=0;HaplotypeScore=124.3127;InbreedingCoeff=0.1943;MQ=52.44;MQ0=7;MQRankSum=-1.999;QD=11.09;ReadPosRankSum=-3.450;VQSLOD=2.5974;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:46.19:46,0,532	0/0:9,0:9:21.53:0,22,342	0/0:24,0:10:11.90:0,12,285	0/0:7,0:1:1.25:0,1,3	0/1:29,0:29:60.11:208,0,60	0/0:13,0:13:32.55:0,33,455	0/1:6,2:8:15.65:115,0,16	1/1:7,14:20:47.05:529,47,0	0/0:14,0:14:39.03:0,39,632	0/0:12,0:11:33.05:0,33,572	0/0:16,0:16:47.95:0,48,800	0/0:14,0:14:36.09:0,36,643	0/0:9,0:9:8.88:0,9,114	0/1:7,0:7:1.93:2,0,120	0/0:6,0:6:15:0,15,228	0/0:10,0:10:29.99:0,30,497	0/0:16,0:15:42.07:0,42,731	0/0:10,0:10:26.90:0,27,399	0/1:7,10:13:12.81:355,0,13	0/1:4,10:13:7.67:414,0,8	0/0:7,0:6:18:0,18,253	1/1:4,0:4:2.45:28,2,0	0/0:15,0:15:42.14:0,42,805	0/0:8,0:8:21.02:0,21,341	0/1:11,0:11:57.32:57,0,71	0/1:17,0:17:9.51:10,0,560	1/1:4,9:13:32.49:380,32,0	0/1:15,0:15:1.93:2,0,432
chr10	83583854	.	AAC	A	1331.30	PASS	AB=0.985;AC=15;AF=0.268;AN=56;BaseQRankSum=3.956;DP=368;FS=2.976;HRun=0;HaplotypeScore=120.6960;InbreedingCoeff=0.3894;MQ=52.42;MQ0=7;MQRankSum=-1.482;QD=9.00;ReadPosRankSum=-3.736;VQSLOD=2.8621;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:23.28:0,23,422	0/0:9,0:9:21.82:0,22,262	0/0:24,0:10:10.35:0,10,244	0/0:7,0:1:2.04:0,2,6	1/1:29,0:29:0.41:205,0,0	0/0:13,0:13:35.69:0,36,385	0/1:8,0:8:3.52:70,0,4	1/1:20,1:20:43.02:315,43,0	0/0:14,0:14:38.77:0,39,526	0/0:12,0:11:32.89:0,33,452	0/0:16,0:16:47.65:0,48,644	0/0:14,0:14:36.07:0,36,523	0/1:9,0:9:33.09:33,0,43	0/1:7,0:7:2.89:3,0,53	0/0:6,0:6:15.03:0,15,204	0/0:10,0:10:30:0,30,415	0/0:16,0:15:41.67:0,42,586	0/0:10,0:10:24.33:0,24,307	0/1:15,2:14:1.70:273,0,2	0/1:14,0:13:9.69:199,0,10	0/0:7,0:6:18.05:0,18,233	1/1:4,0:4:3.17:50,3,0	0/0:15,0:15:42.13:0,42,639	0/0:8,0:8:21.05:0,21,289	0/1:11,0:11:15.90:55,0,16	0/0:17,0:17:29.28:0,29,435	1/1:11,2:13:32.89:286,33,0	0/1:15,0:15:2.02:2,0,331
chr10	83583855	.	AC	A	1348.61	PASS	AB=0.955;AC=22;AF=0.393;AN=56;BaseQRankSum=5.610;DP=364;FS=0.000;HRun=1;HaplotypeScore=115.2580;InbreedingCoeff=0.8079;MQ=52.57;MQ0=7;MQRankSum=-4.320;QD=8.70;ReadPosRankSum=-1.566;VQSLOD=0.4066;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:13.04:0,13,260	0/0:8,0:8:19.24:0,19,186	0/0:24,0:10:11.91:0,12,217	0/0:7,0:1:2.60:0,3,10	1/1:28,1:29:60.28:348,60,0	0/0:13,0:13:32.46:0,32,282	1/1:8,0:8:17.33:105,17,0	1/1:17,2:18:40.52:255,41,0	0/0:14,0:14:25.99:0,26,398	0/0:13,0:12:25.48:0,25,323	0/0:16,0:16:47.63:0,48,506	0/0:12,0:12:34.97:0,35,389	1/1:9,0:9:10.26:50,10,0	1/1:7,0:7:6.04:27,6,0	0/0:6,0:6:15.02:0,15,178	0/0:11,0:11:29.67:0,30,324	0/0:16,0:15:23.37:0,23,404	0/1:9,1:10:2.60:3,0,202	1/1:16,1:13:9.08:195,9,0	1/1:12,1:13:5.87:154,6,0	0/0:7,0:6:18.05:0,18,212	1/1:3,1:4:10.08:59,10,0	0/0:15,0:15:42.01:0,42,476	0/0:8,0:8:21.02:0,21,236	1/1:11,0:11:21.81:151,22,0	0/0:17,0:17:32.26:0,32,267	1/1:13,0:13:32.40:203,32,0	0/1:15,0:15:2.76:3,0,213
chr10	83583904	.	TTACTGGGGG	T	2331.42	PASS	AB=0.972;AC=26;AF=0.464;AN=56;BaseQRankSum=0.890;DP=378;FS=19.781;HRun=0;HaplotypeScore=201.5271;InbreedingCoeff=-0.7278;MQ=61.01;MQ0=7;MQRankSum=-2.480;QD=8.48;ReadPosRankSum=-0.346;VQSLOD=0.9922;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:21:99:162,0,163	0/1:6,0:6:8.05:8,0,139	0/0:43,0:19:51.09:0,51,951	0/0:42,0:13:16.22:0,16,334	0/1:20,2:22:99:470,0,172	0/1:11,0:11:31.59:32,0,175	0/1:7,0:7:6.45:6,0,136	0/1:22,1:22:99:322,0,148	0/1:7,0:7:18.38:72,0,18	0/1:15,0:15:69.93:70,0,205	0/1:17,0:17:99:135,0,255	0/1:10,0:10:14.25:14,0,189	0/1:5,0:5:27.90:35,0,28	0/1:6,0:6:37.16:37,0,81	0/1:6,2:8:99:254,0,107	0/1:8,0:8:23.22:23,0,147	0/1:11,1:12:99:113,0,175	0/1:7,0:7:63.74:64,0,106	0/1:14,0:14:91.26:91,0,223	0/1:6,1:6:36.11:36,0,70	1/1:2,1:1:3.01:82,3,0	0/1:5,0:5:17.36:17,0,67	0/1:14,0:13:69.74:70,0,203	0/1:9,0:9:84.13:94,0,84	0/1:9,1:9:99:129,0,145	0/0:17,0:17:19.64:0,20,543	0/1:14,1:15:99:114,0,192	0/1:12,0:12:36.20:36,0,229
chr10	83583908	.	TGGGGG	T	7475.73	PASS	AB=0.667;AC=51;AF=0.911;AN=56;BaseQRankSum=1.173;DP=339;FS=0.000;HRun=5;HaplotypeScore=150.6996;InbreedingCoeff=0.6620;MQ=64.32;MQ0=9;MQRankSum=-5.422;QD=30.64;ReadPosRankSum=5.920;VQSLOD=0.6851;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,5:18:48.12:790,48,0	1/1:4,1:5:14.03:115,14,0	0/0:49,0:20:52.16:0,52,847	0/0:40,0:13:22.06:0,22,360	1/1:11,10:21:49.04:789,49,0	1/1:6,3:9:25.67:262,26,0	1/1:6,1:7:16.78:128,17,0	1/1:6,13:18:50.48:773,50,0	1/1:2,4:6:17.58:233,18,0	1/1:9,5:14:40.26:452,40,0	0/1:7,7:14:4.59:430,0,5	1/1:6,2:8:22.26:189,22,0	1/1:2,2:4:8.62:113,9,0	1/1:2,2:4:6.02:104,6,0	1/1:5,2:7:20.21:206,20,0	1/1:4,2:7:20.18:231,20,0	1/1:7,1:8:18.80:151,19,0	1/1:5,0:5:14.65:109,15,0	1/1:7,5:12:35.47:446,35,0	1/1:3,1:3:8.61:91,9,0	1/1:1,1:1:3:29,3,0	1/1:3,2:5:14.50:171,15,0	1/1:7,5:11:30.26:343,30,0	1/1:4,2:6:16.07:187,16,0	1/1:8,2:9:25.85:236,26,0	1/1:10,2:12:33.75:245,34,0	1/1:9,4:13:28.56:353,29,0	1/1:8,3:12:34.85:300,35,0
chr10	83583915	.	TTG	T	1554.62	PASS	AB=0.807;AC=24;AF=0.429;AN=56;BaseQRankSum=-0.192;DP=397;FS=39.870;HRun=0;HaplotypeScore=162.7695;InbreedingCoeff=-0.7353;MQ=58.84;MQ0=12;MQRankSum=-2.356;QD=5.44;ReadPosRankSum=-3.663;VQSLOD=1.2340;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:23:6.58:7,0,123	0/1:6,1:7:13.12:13,0,143	0/0:55,0:20:16.05:0,16,345	0/0:46,0:13:12.09:0,12,204	0/1:20,8:28:99:280,0,200	0/1:7,3:10:58.70:59,0,177	0/1:8,1:8:20.62:21,0,109	0/1:10,13:22:99:345,0,105	0/1:4,4:7:66.10:66,0,73	0/1:10,5:15:99:107,0,171	0/1:11,7:18:99:156,0,186	0/1:7,2:9:28.50:29,0,145	0/1:3,2:5:40.10:44,0,40	0/1:4,2:6:45.13:45,0,53	0/1:7,2:9:48.68:49,0,133	0/1:6,1:7:9.25:9,0,134	0/1:9,1:10:4.16:4,0,196	0/0:7,0:7:17.89:0,18,166	0/1:7,5:12:99:124,0,169	0/1:5,1:5:16.87:17,0,44	0/0:2,1:2:2.92:0,3,17	0/1:5,1:6:19.90:20,0,57	0/1:12,5:15:88.13:88,0,242	0/1:6,2:8:47.42:47,0,60	0/1:10,1:10:20.98:21,0,137	0/1:10,2:12:14.57:15,0,215	0/1:11,3:14:82.64:83,0,152	0/1:9,3:12:59.85:60,0,227
chr10	83583924	.	CT	C	106.09	PASS	AB=0.838;AC=13;AF=0.232;AN=56;BaseQRankSum=-1.089;DP=460;FS=3.883;HRun=15;HaplotypeScore=173.8967;InbreedingCoeff=0.1432;MQ=53.33;MQ0=21;MQRankSum=-1.400;QD=0.63;ReadPosRankSum=0.249;VQSLOD=0.1317;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:26:30.60:0,31,221	0/1:6,2:8:7.27:7,0,67	0/1:52,0:18:3.67:4,0,8	0/0:43,1:12:2.66:0,3,52	0/1:20,8:29:37.15:57,0,37	0/1:12,1:13:1.16:1,0,115	0/0:9,0:8:8.15:0,8,40	0/0:25,0:25:22.06:0,22,143	0/1:8,1:9:17.71:18,0,21	0/0:15,0:16:12.45:0,12,129	0/0:21,0:22:19.91:0,20,165	0/1:13,1:13:13.24:13,0,124	0/1:3,2:6:0.59:14,0,1	1/1:3,5:8:1.97:17,2,0	0/0:9,0:9:16.16:0,16,120	0/1:7,1:8:3.78:4,0,74	0/0:15,0:13:16.83:0,17,138	0/0:10,0:10:25.36:0,25,191	0/0:13,0:13:19.39:0,19,116	0/0:8,0:8:11.26:0,11,59	0/0:4,0:2:0:0,0,0	1/1:3,3:8:11.85:64,12,0	0/0:18,0:20:40.01:0,40,294	0/0:11,0:11:7.98:0,8,50	0/1:6,5:11:16.05:47,0,16	0/0:14,1:14:7.91:0,8,81	0/0:12,0:16:24.19:0,24,123	0/0:15,0:15:29.53:0,30,123
chr10	83583930	.	T	TC	834.96	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=3.731;DP=440;FS=2.267;HRun=0;HaplotypeScore=150.1120;InbreedingCoeff=0.0447;MQ=52.31;MQ0=20;MQRankSum=-1.543;QD=4.39;ReadPosRankSum=-0.548;VQSLOD=3.5647;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:22:16.19:16,0,224	0/0:7,0:7:14.06:0,14,153	0/0:48,0:13:24.63:0,25,211	0/0:45,0:11:2.10:0,2,115	0/1:26,0:26:12.62:13,0,287	0/0:15,0:15:16.97:0,17,258	0/0:8,0:7:12.84:0,13,72	0/1:20,0:18:45.95:46,0,184	0/0:8,0:7:13.96:0,14,94	0/1:19,0:19:9.30:9,0,303	0/0:18,0:18:11.72:0,12,284	0/0:14,0:13:8.73:0,9,253	0/1:7,0:7:14.53:15,0,46	0/1:7,0:7:1.28:1,0,37	0/1:9,0:9:5.78:6,0,143	0/0:8,0:8:8.94:0,9,184	0/0:17,0:13:9.22:0,9,231	0/0:10,0:10:29.11:0,29,340	0/1:12,0:10:17.33:17,0,94	0/0:9,0:8:11.08:0,11,63	1/1:4,0:2:0.47:1,0,0	0/0:9,0:9:12.27:0,12,156	0/0:21,0:19:0.31:0,0,357	0/1:11,0:11:2.64:3,0,98	0/0:13,0:12:32.85:0,33,249	1/1:4,14:17:21.38:406,21,0	0/1:16,0:16:21.57:22,0,55	1/1:5,11:16:39.35:433,39,0
chr10	83584202	.	TTTG	T	2909.92	PASS	AB=0.964;AC=23;AF=0.442;AN=52;BaseQRankSum=12.013;DP=643;FS=6.024;HRun=0;HaplotypeScore=97.9627;InbreedingCoeff=0.8905;MQ=73.52;MQ0=6;MQRankSum=-1.758;QD=9.97;ReadPosRankSum=-2.078;VQSLOD=1.9800;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,16:33:39.13:521,39,0	0/0:9,0:9:18.06:0,18,344	./.	./.	1/1:16,13:29:32.98:380,33,0	0/0:20,0:20:36.11:0,36,646	0/0:29,0:29:39.11:0,39,706	1/1:38,0:38:8.72:56,9,0	0/0:22,1:23:11.18:0,11,837	0/0:23,0:23:21.07:0,21,392	0/1:26,1:27:0.90:1,0,645	0/0:14,0:14:6.59:0,7,541	1/1:6,10:16:27.09:360,27,0	1/1:7,14:21:36.12:481,36,0	0/0:24,0:24:21.47:0,21,665	0/0:16,0:16:36.12:0,36,696	0/0:20,0:20:39.13:0,39,755	0/0:17,0:17:33.11:0,33,611	1/1:12,0:17:5.45:41,5,0	1/1:11,0:15:5.95:42,6,0	1/1:7,12:19:21.07:280,21,0	1/1:10,16:24:27.09:360,27,0	0/0:23,0:22:30.07:0,30,511	0/0:23,0:23:42.14:0,42,798	1/1:6,11:17:24.04:300,24,0	0/0:27,0:27:36.12:0,36,686	1/1:11,0:34:41.66:293,42,0	0/0:16,0:15:39.13:0,39,740
chr10	83584646	.	C	CTT	1290.23	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=1.311;DP=404;FS=0.657;HRun=10;HaplotypeScore=68.0503;InbreedingCoeff=0.9372;MQ=59.61;MQ0=0;MQRankSum=-1.406;QD=23.04;ReadPosRankSum=-2.148;VQSLOD=2.7305;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:48.02:0,48,488	0/0:4,0:4:9:0,9,92	0/0:14,0:10:21.04:0,21,213	0/0:8,0:6:17.30:0,17,124	1/1:2,16:18:42.06:577,42,0	0/0:14,0:14:36.07:0,36,366	1/1:1,0:4:7.49:26,7,0	0/0:24,0:23:35.95:0,36,355	0/0:17,0:18:47.80:0,48,462	0/0:24,0:24:60.09:0,60,600	0/0:16,0:16:36.04:0,36,366	0/0:8,0:8:24.04:0,24,237	1/1:1,2:3:6.02:90,6,0	1/1:6,4:10:13.29:182,13,0	0/0:8,0:8:21.04:0,21,214	0/0:12,0:12:33.07:0,33,336	0/0:31,0:32:77.90:0,78,774	0/0:10,0:10:22.86:0,23,218	0/0:24,0:25:50.82:0,51,581	0/0:14,0:14:30.04:0,30,305	0/0:10,0:10:30.01:0,30,283	1/1:1,5:7:17.50:207,18,0	0/0:8,0:10:26.80:0,27,256	0/0:8,0:8:21.05:0,21,214	1/1:6,8:13:30.10:384,30,0	0/0:20,0:21:35.73:0,36,424	0/0:24,0:24:39.32:0,39,397	0/0:17,0:18:47.84:0,48,469
chr10	83584660	.	G	GTATT	2511.83	PASS	AB=0.762;AC=23;AF=0.442;AN=52;BaseQRankSum=3.952;DP=362;FS=2.328;HRun=0;HaplotypeScore=70.1105;InbreedingCoeff=0.7064;MQ=56.20;MQ0=2;MQRankSum=-5.737;QD=13.73;ReadPosRankSum=-3.173;VQSLOD=2.5965;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,8:22:24.08:544,24,0	0/0:2,0:2:3.01:0,3,48	0/0:14,0:8:6.02:0,6,88	./.	1/1:11,5:16:18.06:333,18,0	0/0:12,0:12:21.07:0,21,334	1/1:3,0:4:3.01:52,3,0	1/1:31,0:19:12.04:196,12,0	0/0:15,0:15:12.03:0,12,168	0/0:20,0:20:27.08:0,27,410	0/0:14,0:14:21.07:0,21,336	0/0:7,0:7:12.03:0,12,169	./.	1/1:2,2:4:6.02:112,6,0	0/0:8,0:8:12.04:0,12,192	0/0:10,0:10:6.02:0,6,96	0/0:27,0:31:63.19:0,63,938	0/0:11,0:10:18.06:0,18,288	1/1:21,0:21:15.05:245,15,0	1/1:13,0:13:15.05:248,15,0	0/0:9,0:9:9.01:0,9,119	1/1:4,1:5:3.01:72,3,0	0/0:8,0:8:6.02:0,6,96	0/0:7,0:7:9.03:0,9,144	1/1:6,4:9:12.04:256,12,0	0/1:11,0:16:33.76:141,0,34	1/1:24,0:24:27.56:451,28,0	1/1:15,0:17:3.01:52,3,0
chr10	83584674	.	A	ATTTATTTG	3747.01	PASS	AB=1.000;AC=16;AF=0.296;AN=54;BaseQRankSum=-1.842;DP=343;FS=2.405;HRun=0;HaplotypeScore=79.4389;InbreedingCoeff=0.2405;MQ=53.97;MQ0=3;MQRankSum=-4.677;QD=21.17;ReadPosRankSum=1.550;VQSLOD=2.7706;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:87.71:88,0,99	0/0:4,0:4:12:0,12,157	0/0:12,0:5:6.02:0,6,147	./.	0/1:15,0:15:79.22:93,0,79	0/0:12,0:12:30.06:0,30,639	0/1:3,0:3:31.96:97,0,32	1/1:32,0:20:50.70:401,51,0	0/0:10,0:10:21.02:0,21,362	0/0:15,0:15:42.09:0,42,841	0/0:18,0:18:44.63:0,45,753	0/0:8,0:8:18.03:0,18,345	0/0:1,0:1:2.99:0,3,24	0/1:5,0:5:26.54:27,0,38	0/0:10,0:10:18.03:0,18,377	0/0:6,0:6:11.99:0,12,210	0/0:32,0:32:84.09:0,84,1770	0/0:11,0:10:29.89:0,30,569	1/1:4,12:16:39.01:1012,39,0	1/1:0,13:14:26.80:631,27,0	0/0:7,0:7:14.71:0,15,247	0/1:2,0:2:9.85:10,0,19	0/0:5,0:5:12.01:0,12,214	0/0:5,0:5:9.03:0,9,245	0/1:12,0:11:42.77:43,0,89	0/1:14,0:14:99:168,0,212	1/1:2,25:33:26.23:1118,26,0	0/1:12,0:12:59.01:59,0,137
chr10	83585917	.	GA	G	927.53	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=-0.401;DP=790;FS=17.777;HRun=3;HaplotypeScore=60.3284;InbreedingCoeff=0.9083;MQ=24.35;MQ0=283;MQRankSum=-2.447;QD=10.19;ReadPosRankSum=-0.065;VQSLOD=0.1285;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:20:24.04:0,24,322	0/0:13,0:9:18.06:0,18,257	./.	./.	0/0:22,0:10:12.04:0,12,172	0/0:17,0:4:6.02:0,6,86	0/0:38,0:11:27.09:0,27,388	1/1:10,12:12:33.03:375,33,0	0/0:35,0:16:24.07:0,24,328	0/0:30,0:17:48.15:0,48,674	0/0:19,0:15:15.05:0,15,216	0/0:40,0:8:11.77:0,12,172	0/0:26,0:10:18.06:0,18,258	0/0:43,0:11:24.08:0,24,345	0/0:26,0:15:21.07:0,21,302	0/0:22,0:7:15.04:0,15,199	0/0:53,0:17:27.09:0,27,386	0/0:25,0:10:9.03:0,9,129	1/1:13,11:7:18.06:223,18,0	1/1:5,14:12:12.04:148,12,0	0/0:74,0:38:33.54:0,34,453	0/0:23,0:12:21.07:0,21,302	0/0:20,0:7:18.06:0,18,259	0/0:43,0:26:32.93:0,33,363	0/0:27,0:18:39.10:0,39,538	0/0:37,0:19:54.15:0,54,755	1/1:12,14:11:26.93:334,27,0	0/0:15,0:9:24.08:0,24,345
chr10	83591564	.	AATAT	A	84.73	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=1.771;DP=5276;DS;FS=0.000;HRun=0;HaplotypeScore=24.2451;InbreedingCoeff=0.3330;MQ=10.00;MQ0=5090;MQRankSum=0.092;QD=0.28;ReadPosRankSum=2.736;VQSLOD=0.8020;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:180,0:9:27.09:0,27,753	0/0:250,0:2:3.01:0,3,84	0/0:13,0:2:6.02:0,6,163	0/0:14,0:5:15:0,15,347	0/0:250,0:4:6.02:0,6,167	0/0:250,0:3:6.02:0,6,167	./.	./.	0/0:250,0:4:6.02:0,6,167	0/0:249,0:2:6.02:0,6,161	0/0:250,0:5:9.03:0,9,251	0/0:250,0:2:6.02:0,6,167	0/0:250,0:1:3.01:0,3,84	0/0:250,0:5:12.04:0,12,335	0/0:250,0:3:6.02:0,6,167	0/0:250,0:7:18.06:0,18,502	0/0:111,0:7:18.06:0,18,503	0/0:67,0:2:3.01:0,3,84	0/0:250,0:2:6.02:0,6,168	0/0:199,0:2:3.01:0,3,84	0/0:27,0:14:24.55:0,25,671	0/0:250,0:5:12.04:0,12,334	0/0:250,0:8:21.07:0,21,586	0/0:82,0:8:18.06:0,18,502	0/0:250,0:2:6.02:0,6,167	1/1:239,11:2:3.01:60,3,0	0/0:33,0:5:15.05:0,15,418	1/1:49,2:2:6.02:120,6,0
chr10	83594239	.	TG	T	235.94	PASS	AC=10;AF=0.217;AN=46;BaseQRankSum=-3.226;DP=206;FS=12.274;HRun=9;HaplotypeScore=33.9830;InbreedingCoeff=0.6710;MQ=70.99;MQ0=36;MQRankSum=-0.032;QD=11.80;ReadPosRankSum=-0.368;VQSLOD=0.8664;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:11.97:0,12,122	0/0:2,0:1:3.01:0,3,35	0/0:18,0:12:6.05:0,6,178	0/0:15,0:5:14.90:0,15,130	0/0:5,0:4:8.95:0,9,70	./.	0/0:9,0:8:20.81:0,21,151	./.	0/0:2,0:2:3.01:0,3,33	0/0:5,0:5:9.03:0,9,104	./.	./.	0/0:10,0:8:20.96:0,21,175	0/0:11,0:11:20.89:0,21,162	0/0:10,0:6:12.03:0,12,136	./.	0/0:7,0:5:8.99:0,9,90	0/0:4,0:4:6.02:0,6,69	1/1:2,2:4:6:55,6,0	1/1:2,4:6:12:109,12,0	0/0:8,0:8:5.68:0,6,29	0/0:9,0:8:20.90:0,21,161	0/0:4,0:4:9.03:0,9,104	0/0:6,0:5:9.01:0,9,93	0/0:7,0:7:17.93:0,18,141	1/1:0,4:4:11.98:103,12,0	1/1:1,2:3:3:27,3,0	1/1:0,3:3:9:82,9,0
chr10	83594339	.	AT	A	1025.52	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=6.735;DP=239;FS=4.083;HRun=1;HaplotypeScore=26.9695;InbreedingCoeff=0.9065;MQ=36.36;MQ0=39;MQRankSum=-3.289;QD=22.29;ReadPosRankSum=-0.161;VQSLOD=3.4361;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:7:15.05:0,15,239	0/0:6,0:5:15.05:0,15,238	./.	./.	1/1:5,2:4:12.04:167,12,0	0/0:9,0:9:27.09:0,27,430	0/0:6,0:6:15.05:0,15,234	0/0:13,0:12:36.08:0,36,529	0/0:5,0:5:12.04:0,12,191	0/0:8,0:6:18.06:0,18,279	0/0:17,0:13:39.05:0,39,590	0/0:6,0:5:15.04:0,15,216	1/1:2,2:2:6.02:84,6,0	1/1:2,10:9:27.09:376,27,0	0/0:11,0:8:24.08:0,24,382	0/0:10,0:10:30.10:0,30,478	0/0:11,0:8:24.08:0,24,377	0/0:8,0:6:15.05:0,15,228	0/0:5,0:5:15.04:0,15,211	0/0:4,0:4:12.04:0,12,191	0/0:10,0:9:27.09:0,27,429	1/1:7,8:8:24.08:334,24,0	0/0:12,0:9:27.09:0,27,427	0/0:10,0:6:15.05:0,15,239	1/1:2,6:7:17.99:227,18,0	0/0:8,0:7:18.06:0,18,287	0/0:19,0:14:39.13:0,39,620	0/0:5,0:3:9.03:0,9,144
chr10	83594377	.	TA	T	1513.83	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=10.554;DP=384;FS=4.791;HRun=10;HaplotypeScore=45.8694;InbreedingCoeff=0.8633;MQ=58.36;MQ0=26;MQRankSum=-0.505;QD=15.61;ReadPosRankSum=0.198;VQSLOD=3.5391;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:16:39.09:0,39,422	0/0:6,0:5:12.03:0,12,133	0/1:13,0:9:11.42:11,0,114	0/0:3,0:1:2.50:0,2,9	1/1:3,9:9:26.99:234,27,0	0/0:12,0:12:30.04:0,30,318	1/1:2,12:14:32.98:286,33,0	0/0:19,0:15:36.07:0,36,381	0/0:9,0:9:27.07:0,27,299	0/0:20,0:20:48.12:0,48,524	0/0:14,1:16:12.50:0,12,353	0/0:9,0:9:24.05:0,24,257	1/1:1,12:12:32.99:286,33,0	1/1:2,11:13:32.99:286,33,0	0/0:13,0:12:25.34:0,25,324	0/0:14,0:14:39.09:0,39,422	0/0:18,0:15:38.67:0,39,391	0/0:18,0:17:45.59:0,46,499	0/0:9,0:9:24.06:0,24,263	0/0:13,0:13:36.04:0,36,376	0/0:13,0:12:33.05:0,33,351	1/1:7,10:14:29.99:260,30,0	0/0:15,0:13:33.05:0,33,350	0/0:13,0:10:24.06:0,24,265	1/1:1,14:14:38.99:338,39,0	0/0:13,0:13:33.09:0,33,365	0/0:21,0:18:45.08:0,45,483	0/0:15,0:13:39.11:0,39,431
chr10	83596428	.	C	CA	453.17	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=-1.430;DP=240;FS=3.407;HRun=8;HaplotypeScore=75.4007;InbreedingCoeff=0.4571;MQ=54.49;MQ0=0;MQRankSum=-1.562;QD=8.24;ReadPosRankSum=0.936;VQSLOD=1.4481;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,8:12:7.93:101,8,0	0/0:5,0:5:9:0,9,81	0/0:8,0:3:14.89:0,15,134	0/0:5,0:2:12:0,12,106	0/0:10,0:10:11.97:0,12,108	0/0:12,0:12:8.96:0,9,81	0/0:8,0:8:8.98:0,9,82	0/0:6,0:6:15.01:0,15,136	0/0:9,0:9:8.97:0,9,77	0/0:10,0:10:30.02:0,30,271	0/1:12,0:12:0:0,0,0	0/0:8,0:8:8.93:0,9,73	0/0:10,0:10:11.99:0,12,109	0/0:9,0:9:2.97:0,3,27	0/0:20,0:20:29.81:0,30,247	0/0:9,0:9:5.92:0,6,45	0/0:7,0:7:9:0,9,81	0/0:5,0:5:8.95:0,9,81	0/0:6,0:6:17.96:0,18,155	0/1:7,0:7:0:0,0,0	0/1:8,0:8:6.64:7,0,45	0/0:10,0:10:11.98:0,12,108	0/0:4,0:4:2.99:0,3,25	0/0:10,0:10:5.98:0,6,54	0/0:4,0:4:3:0,3,27	1/1:9,7:16:42.10:459,42,0	0/0:10,0:10:21:0,21,190	./.
chr10	83596495	.	GGAGGAAGAA	G	888.31	PASS	AB=0.667;AC=3;AF=0.054;AN=56;BaseQRankSum=6.332;DP=567;FS=27.456;HRun=0;HaplotypeScore=242.1462;InbreedingCoeff=0.5876;MQ=63.60;MQ0=1;MQRankSum=-4.187;QD=46.75;ReadPosRankSum=0.952;VQSLOD=2.0878;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:31.01:0,31,2737	0/0:10,0:10:24.08:0,24,974	0/0:23,0:17:29.45:0,29,646	0/0:34,0:27:18.53:0,19,724	0/0:21,0:21:54.19:0,54,2011	0/0:25,0:25:63.22:0,63,2242	0/0:23,0:23:45.15:0,45,1657	0/0:10,0:10:21.07:0,21,494	0/0:26,0:26:69.24:0,69,2962	0/0:24,0:24:60.17:0,60,2322	0/0:22,0:22:63.15:0,63,2441	0/0:17,0:17:45.15:0,45,1825	0/0:19,0:19:39.05:0,39,1573	0/0:17,0:17:45.15:0,45,1903	0/0:35,0:35:91.19:0,91,3267	0/0:14,0:14:33.11:0,33,1461	0/0:18,0:18:51.18:0,51,1847	0/0:16,0:16:39.13:0,39,1429	0/0:14,0:14:36.11:0,36,1247	0/0:19,0:19:45.14:0,45,1808	0/0:30,0:30:72.49:0,72,3103	0/0:27,0:27:78.27:0,78,3033	0/0:14,0:14:36.12:0,36,1406	0/0:25,0:25:31.16:0,31,2359	0/0:14,0:14:36.12:0,36,1584	0/1:8,8:16:99:728,0,99	0/0:23,0:23:60.21:0,60,2391	1/1:0,3:3:9.03:257,9,0
chr10	83596999	.	A	AGAG	3713.29	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-0.261;DP=702;FS=26.818;HRun=0;HaplotypeScore=124.6034;InbreedingCoeff=0.9917;MQ=62.75;MQ0=9;MQRankSum=-4.592;QD=41.72;ReadPosRankSum=-0.290;VQSLOD=2.2294;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,18:29:42.07:846,42,0	0/0:16,0:16:36.05:0,36,483	0/0:55,0:22:38.98:0,39,492	0/0:60,0:24:13.70:0,14,212	0/0:28,0:28:63.15:0,63,825	0/0:18,0:18:51.17:0,51,751	1/1:5,14:20:54.12:1064,54,0	0/0:24,0:24:27.06:0,27,332	0/0:29,0:29:78.26:0,78,1148	0/0:23,0:23:51.16:0,51,733	0/0:18,0:18:42.13:0,42,599	0/0:25,0:25:75.21:0,75,1040	0/0:22,0:22:51.15:0,51,711	0/0:21,0:21:45.15:0,45,658	0/0:18,0:18:45.10:0,45,586	0/0:15,0:15:45.15:0,45,662	0/0:37,0:38:82.01:0,82,1121	0/0:19,0:19:42.42:0,42,549	0/0:18,0:18:30.09:0,30,425	0/0:23,0:23:54.17:0,54,765	0/0:23,0:23:60.13:0,60,857	0/0:25,0:25:69.18:0,69,962	0/0:18,0:18:36.12:0,36,530	0/0:31,0:31:73.80:0,74,1063	0/0:21,0:21:54.17:0,54,772	1/1:16,10:27:19.01:1016,19,0	0/0:24,0:24:57.18:0,57,820	1/1:0,13:13:39.13:788,39,0
chr10	83597023	.	A	AGAG	6721.40	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=-3.420;DP=636;FS=9.374;HRun=0;HaplotypeScore=112.0105;InbreedingCoeff=0.8223;MQ=62.20;MQ0=4;MQRankSum=-3.050;QD=32.95;ReadPosRankSum=1.121;VQSLOD=5.3191;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:30.77:0,31,659	0/0:13,0:13:27.09:0,27,398	0/0:32,0:18:25.36:0,25,374	0/1:33,0:17:5:5,0,275	1/1:6,19:25:10.01:995,10,0	0/0:21,0:21:53.38:0,53,740	1/1:10,13:23:36.11:708,36,0	0/0:23,0:23:30.21:0,30,444	0/0:30,0:30:75.25:0,75,1104	0/0:24,0:24:69.22:0,69,969	0/0:19,0:19:45.13:0,45,619	0/0:28,0:28:69.22:0,69,997	1/1:2,17:19:54.19:1099,54,0	1/1:3,13:16:33.11:684,33,0	0/0:20,0:20:48.15:0,48,687	0/0:12,0:12:33.11:0,33,486	0/0:32,0:33:86.94:0,87,1183	0/0:21,0:22:5.92:0,6,581	0/0:21,0:21:45.14:0,45,641	0/0:22,0:22:51.17:0,51,751	0/0:23,0:23:51.13:0,51,722	1/1:6,23:30:54.19:1116,54,0	0/0:15,0:15:36.11:0,36,511	0/0:26,0:26:57.19:0,57,837	1/1:4,15:19:39.13:808,39,0	0/1:21,0:21:13.93:693,0,14	0/0:23,0:23:51.16:0,51,733	1/1:18,0:18:33.95:613,34,0
chr10	83597030	.	G	GAGA	5181	PASS	AB=0.925;AC=10;AF=0.179;AN=56;BaseQRankSum=11.975;DP=647;FS=9.809;HRun=0;HaplotypeScore=121.6200;InbreedingCoeff=0.3209;MQ=62.26;MQ0=3;MQRankSum=-0.522;QD=30.12;ReadPosRankSum=4.476;VQSLOD=5.0242;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:63.22:0,63,930	0/0:15,0:15:42.03:0,42,578	0/0:31,0:20:34.07:0,34,617	0/0:32,0:20:10.62:0,11,449	0/1:25,0:25:65.77:589,0,66	0/0:19,0:19:54.17:0,54,884	0/1:22,0:22:91.94:382,0,92	0/0:25,0:25:68.92:0,69,855	0/0:29,0:29:84.25:0,84,1351	0/0:25,0:25:75.24:0,75,1230	0/0:19,0:19:51.12:0,51,806	0/0:26,0:26:72.23:0,72,1196	1/1:18,0:18:54.16:678,54,0	0/1:19,0:19:79.61:370,0,80	0/0:20,0:20:57.16:0,57,891	0/0:13,0:13:39.11:0,39,612	0/0:39,0:39:99:0,107,1549	0/0:23,0:23:44.10:0,44,837	0/0:21,0:21:57.14:0,57,868	0/0:20,0:20:56.92:0,57,905	0/0:26,0:26:72.16:0,72,1064	0/1:30,0:30:10.77:644,0,11	0/0:14,0:14:39.12:0,39,633	0/0:24,0:24:66.18:0,66,1043	0/1:19,0:19:4.79:443,0,5	0/1:4,17:21:34.81:1106,0,35	0/0:21,0:21:62.36:0,62,917	1/1:7,11:18:46.10:970,46,0
chr10	83597728	.	GA	G	1897.63	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.481;DP=663;FS=2.888;HRun=7;HaplotypeScore=66.0919;InbreedingCoeff=0.9980;MQ=77.69;MQ0=0;MQRankSum=-2.400;QD=24.33;ReadPosRankSum=3.520;VQSLOD=4.1701;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,55:58:99:1438,141,0	0/0:9,0:9:27.08:0,27,328	0/0:17,0:16:39.12:0,39,489	0/0:20,0:20:39.96:0,40,451	0/0:30,0:30:85.15:0,85,1056	0/0:15,0:15:45.14:0,45,566	0/0:33,0:33:93.27:0,93,1145	0/0:34,0:34:87.27:0,87,1075	0/0:25,0:25:75.24:0,75,943	0/0:28,0:28:72.23:0,72,906	0/0:21,0:21:57.15:0,57,695	0/0:22,0:22:63.15:0,63,751	0/0:11,0:11:24.08:0,24,302	0/0:17,0:17:51.16:0,51,641	0/0:21,0:21:48.14:0,48,591	0/0:29,0:29:81.25:0,81,1006	0/0:48,0:48:99:0,138,1720	0/0:19,0:19:45.14:0,45,566	0/0:17,0:17:42.13:0,42,517	0/0:27,0:27:72.23:0,72,900	1/1:1,19:20:57.13:582,57,0	0/0:27,0:27:69.21:0,69,848	0/0:18,0:18:45.14:0,45,566	0/0:18,0:18:54.17:0,54,679	0/0:15,0:15:42.13:0,42,528	0/0:24,0:24:66.21:0,66,830	0/0:29,0:29:81.24:0,81,994	0/0:11,0:11:30.10:0,30,377
chr10	83598171	.	TA	T	2118.45	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=7.708;DP=528;FS=4.826;HRun=8;HaplotypeScore=85.1375;InbreedingCoeff=0.8121;MQ=82.27;MQ0=5;MQRankSum=0.523;QD=17.80;ReadPosRankSum=0.390;VQSLOD=3.5266;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:41:84.19:0,84,487	0/0:9,0:9:27.08:0,27,326	0/0:52,0:24:36.62:0,37,275	0/0:53,0:25:26.76:0,27,143	0/0:23,0:23:66.03:0,66,741	0/0:19,0:19:48.14:0,48,570	0/1:16,0:16:0.53:1,0,40	1/1:4,25:29:77.66:658,78,0	0/0:9,0:9:24.03:0,24,254	0/0:18,0:18:51.13:0,51,594	0/0:20,0:20:48.12:0,48,554	0/0:10,0:10:21.06:0,21,253	0/0:4,0:4:12.04:0,12,145	0/0:8,0:8:21.06:0,21,253	0/0:9,0:9:24.06:0,24,279	0/0:14,0:14:36.10:0,36,423	0/0:26,0:26:78.19:0,78,905	0/0:21,0:21:48.11:0,48,553	1/1:2,16:18:47.94:426,48,0	1/1:4,19:23:57:530,57,0	0/1:8,0:8:7.42:7,0,16	0/0:8,0:8:15.05:0,15,181	0/0:9,0:9:24.06:0,24,278	0/0:13,0:13:27.07:0,27,315	0/0:12,0:12:33.08:0,33,385	0/0:19,0:19:57.05:0,57,586	1/1:2,23:25:69.10:659,69,0	0/0:11,0:11:33.05:0,33,353
chr10	83598179	.	AT	A	851.09	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=12.446;DP=534;FS=12.129;HRun=9;HaplotypeScore=91.4153;InbreedingCoeff=0.7027;MQ=83.29;MQ0=5;MQRankSum=-1.196;QD=4.84;ReadPosRankSum=2.045;VQSLOD=0.4015;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:38:67.39:321,67,0	0/0:11,0:11:33.02:0,33,331	0/0:65,2:31:24.10:0,24,290	0/0:56,0:25:34.80:0,35,241	0/0:26,0:26:65.35:0,65,691	0/0:17,0:17:48.10:0,48,530	1/1:2,12:14:33.02:301,33,0	0/1:29,0:29:9.80:64,0,10	0/0:9,0:9:20.85:0,21,189	0/0:18,0:18:51.07:0,51,554	0/0:18,0:18:48.12:0,48,540	0/0:7,0:7:21.04:0,21,231	0/0:6,0:6:18.01:0,18,185	0/0:8,0:8:24.03:0,24,260	0/0:8,0:8:21.04:0,21,231	0/0:12,0:12:33.09:0,33,378	0/0:27,0:27:75.12:0,75,801	0/0:19,0:19:57.05:0,57,594	0/1:19,0:19:15.68:25,0,16	1/1:21,0:21:14.15:65,14,0	1/1:1,8:10:15.01:137,15,0	0/0:6,0:6:18.04:0,18,196	0/0:9,0:9:24.03:0,24,239	0/0:11,0:11:27.05:0,27,289	0/0:12,0:12:36.07:0,36,393	0/1:21,0:21:13.58:14,0,52	1/1:24,0:23:26.90:108,27,0	0/0:11,0:11:21.17:0,21,71
chr10	83599151	.	C	CT	577.90	PASS	AB=0.804;AC=5;AF=0.089;AN=56;BaseQRankSum=6.302;DP=580;FS=1.658;HRun=2;HaplotypeScore=82.8804;InbreedingCoeff=-0.1057;MQ=58.33;MQ0=11;MQRankSum=-3.666;QD=5.07;ReadPosRankSum=-3.120;VQSLOD=-0.4637;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,12:33:99:303,0,483	0/0:15,0:15:45.14:0,45,557	0/0:16,0:6:14.82:0,15,141	0/0:24,0:13:30.06:0,30,334	0/0:17,0:17:48.15:0,48,595	0/0:17,0:17:48.15:0,48,594	0/1:23,7:30:90.35:90,0,730	0/0:15,0:12:30.07:0,30,357	0/0:27,0:27:75.24:0,75,928	0/0:16,0:16:48.14:0,48,584	0/0:5,0:5:12.04:0,12,149	0/0:26,0:26:75.24:0,75,927	0/0:26,0:26:78.25:0,78,966	0/0:22,0:22:63.20:0,63,780	0/0:15,0:15:45.14:0,45,558	0/0:16,0:16:48.15:0,48,595	0/0:28,0:28:78.25:0,78,966	0/0:32,0:32:93.29:0,93,1152	0/1:16,2:13:67.77:68,0,130	0/1:14,3:16:99:114,0,302	0/0:25,0:22:5.05:0,5,470	0/0:28,0:27:78.21:0,78,940	0/0:15,0:15:45.14:0,45,558	0/0:43,0:43:99:0,126,1530	0/0:14,0:14:42.10:0,42,495	0/0:17,0:16:34.84:0,35,386	0/1:10,6:15:99:120,0,289	0/0:6,0:6:16.78:0,17,164
chr10	83599787	.	T	TCA	2407.27	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-9.730;DP=772;FS=4.908;HRun=0;HaplotypeScore=94.1975;InbreedingCoeff=0.9827;MQ=67.50;MQ0=0;MQRankSum=-0.754;QD=27.99;ReadPosRankSum=0.586;VQSLOD=4.5399;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,114,1380	0/0:11,0:12:29.92:0,30,344	0/0:28,0:25:14.86:0,15,519	0/0:23,0:22:35.08:0,35,490	0/0:30,0:30:72.22:0,72,879	0/0:24,0:24:54.15:0,54,647	0/0:34,0:36:86.90:0,87,991	0/0:25,0:25:51.14:0,51,593	0/0:29,0:29:69.19:0,69,819	0/0:24,0:24:51.14:0,51,603	0/0:22,0:22:57.16:0,57,683	0/0:35,0:35:96.28:0,96,1149	0/0:26,0:26:72.23:0,72,880	0/0:22,0:23:66.04:0,66,784	0/0:23,0:24:59.98:0,60,674	0/0:23,0:23:63.20:0,63,770	0/0:32,0:32:78.24:0,78,953	0/0:29,0:31:74.88:0,75,857	0/0:17,0:17:39.11:0,39,465	0/0:17,0:17:36.11:0,36,440	1/1:24,61:86:92.23:2502,92,0	0/0:22,0:22:54.10:0,54,641	0/0:17,0:17:33.10:0,33,403	0/0:28,0:28:57.18:0,57,697	0/0:17,0:18:44.97:0,45,527	0/0:29,0:29:63.03:0,63,747	0/0:20,0:20:42.13:0,42,513	0/0:19,0:20:45.14:0,45,548
chr10	83601469	.	A	AT	9666.54	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=11.221;DP=669;FS=3.456;HRun=6;HaplotypeScore=91.2449;InbreedingCoeff=0.9994;MQ=92.11;MQ0=1;MQRankSum=-2.920;QD=30.88;ReadPosRankSum=3.250;VQSLOD=5.1713;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,36:39:99:1223,99,0	0/0:8,0:8:24.05:0,24,245	0/0:34,0:30:51.43:0,51,554	0/0:33,0:32:27.28:0,27,505	1/1:6,32:38:90.18:1090,90,0	0/0:20,0:20:54.08:0,54,531	1/1:2,24:26:63.20:793,63,0	1/1:4,20:24:60.10:708,60,0	0/0:28,0:28:78.16:0,78,789	0/0:31,0:31:84.18:0,84,853	0/0:15,0:15:39.08:0,39,394	0/0:25,0:25:66.13:0,66,665	1/1:3,11:14:36.11:443,36,0	1/1:3,12:15:30.10:377,30,0	0/0:23,0:23:66.14:0,66,666	0/0:14,0:14:42.10:0,42,429	0/0:24,0:24:69.14:0,69,697	0/0:26,0:26:66.14:0,66,673	1/1:5,11:16:33.11:414,33,0	1/1:2,20:23:60.19:750,60,0	0/0:21,0:21:56.70:0,57,545	1/1:2,19:21:54.17:675,54,0	0/0:27,0:27:72.14:0,72,726	0/0:27,0:27:78.15:0,78,784	1/1:1,16:17:45.14:566,45,0	1/1:3,28:31:78.23:966,78,0	1/1:1,33:33:93.30:1170,93,0	1/1:0,15:15:39.12:490,39,0
chr10	83602031	.	C	CAGCT	10041.28	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.484;DP=670;FS=0.000;HRun=0;HaplotypeScore=124.9568;InbreedingCoeff=0.9832;MQ=85.26;MQ0=0;MQRankSum=-6.343;QD=63.96;ReadPosRankSum=1.619;VQSLOD=6.2917;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,2061	0/0:15,0:15:42.13:0,42,752	0/0:20,0:20:54.19:0,54,1008	0/0:25,0:25:63.18:0,63,1079	1/1:2,14:17:36.12:956,36,0	0/0:21,0:21:60.21:0,60,1120	0/0:31,0:31:69.25:0,69,1549	0/0:23,0:23:57.20:0,57,1051	0/0:18,0:18:51.17:0,51,945	0/0:27,0:27:72.24:0,72,1343	0/0:24,0:24:72.24:0,72,1314	0/0:32,1:33:7.27:0,7,1487	1/1:4,22:27:66.23:1758,66,0	1/1:2,32:35:90.31:2396,90,0	0/0:17,0:17:45.14:0,45,809	0/0:21,0:21:54.19:0,54,1008	0/0:31,0:31:87.28:0,87,1581	0/0:21,0:21:60.16:0,60,1082	0/0:16,0:16:39.12:0,39,681	0/0:14,0:14:36.12:0,36,672	1/1:7,28:39:81.28:2159,81,0	1/1:2,18:21:54.19:1434,54,0	0/0:11,0:11:30.08:0,30,518	0/0:38,0:38:99:0,105,1924	1/1:1,16:18:51.18:1338,51,0	0/0:28,0:28:75.26:0,75,1387	0/0:23,0:23:66.23:0,66,1231	0/0:18,0:18:54.19:0,54,1008
chr10	83602216	.	A	AG	7171.94	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-10.138;DP=632;FS=7.425;HRun=6;HaplotypeScore=62.5952;InbreedingCoeff=0.9978;MQ=85.05;MQ0=0;MQRankSum=-4.057;QD=32.16;ReadPosRankSum=1.078;VQSLOD=5.2612;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,42:46:99:1534,123,0	0/0:8,0:8:24.05:0,24,245	0/0:22,0:22:44.23:0,44,431	0/0:21,0:21:47.99:0,48,466	1/1:1,18:19:48.15:604,48,0	0/0:22,0:22:60.13:0,60,612	1/1:3,31:34:81.26:1019,81,0	0/0:24,0:24:54.11:0,54,546	0/0:11,0:11:33.08:0,33,337	0/0:24,0:24:63.13:0,63,638	0/0:7,0:7:18.04:0,18,184	0/0:24,0:24:66.13:0,66,666	1/1:3,14:17:39.12:480,39,0	1/1:5,24:29:72.23:905,72,0	0/0:20,0:20:54.12:0,54,551	0/0:22,0:22:63.14:0,63,643	0/0:40,0:40:99:0,108,1088	0/0:25,0:25:69.16:0,69,704	0/0:19,0:19:51.11:0,51,520	0/0:11,0:11:27.06:0,27,275	0/0:33,0:33:93.21:0,93,949	1/1:0,19:19:51.16:641,51,0	0/0:19,0:19:51.12:0,51,520	0/0:35,0:35:96.21:0,96,979	1/1:0,23:23:66.17:812,66,0	1/1:3,17:20:23.55:610,24,0	0/0:22,0:21:63.14:0,63,642	1/1:0,16:16:45.14:566,45,0
chr10	83602519	.	GGAGCGCGC	G	4563.13	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=9.731;DP=568;FS=0.000;HRun=0;HaplotypeScore=173.7989;InbreedingCoeff=0.6990;MQ=72.93;MQ0=2;MQRankSum=-7.465;QD=24.94;ReadPosRankSum=-3.142;VQSLOD=3.9055;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:84.21:0,84,2467	0/0:10,0:10:30.10:0,30,1259	0/0:13,0:10:18.33:0,18,265	0/1:15,0:13:0.08:0,0,168	1/1:15,0:14:8.30:47,8,0	0/0:26,0:26:75.23:0,75,2752	0/0:20,0:20:55.65:0,56,1973	1/1:0,18:18:48.06:1018,48,0	0/0:24,0:24:69.22:0,69,2472	0/0:19,0:19:54.17:0,54,1781	0/0:9,0:9:24.07:0,24,873	0/0:17,0:17:51.17:0,51,1834	0/1:13,0:13:27.08:27,0,43	0/1:18,0:18:53.10:147,0,53	0/0:14,0:14:39.13:0,39,1471	0/0:18,0:18:54.19:0,54,2053	0/0:46,0:46:99:0,138,5287	0/0:25,0:25:69.19:0,69,2353	1/1:1,10:11:29.99:497,30,0	1/1:0,3:8:11.62:187,12,0	0/0:47,0:47:32.24:0,32,1192	1/1:13,0:13:11.28:112,11,0	0/0:18,0:18:48.05:0,48,1145	0/0:42,0:42:99:0,120,4220	0/1:21,0:21:24.05:125,0,24	1/1:3,20:27:72.05:1427,72,0	1/1:0,8:12:18.11:441,18,0	1/1:1,6:12:24.06:536,24,0
chr10	83602533	.	CGTGCGT	C	1648.16	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=11.348;DP=580;FS=4.721;HRun=0;HaplotypeScore=164.8921;InbreedingCoeff=0.3761;MQ=58.42;MQ0=3;MQRankSum=-8.084;QD=8.86;ReadPosRankSum=2.792;VQSLOD=2.6250;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:48.06:0,48,1134	0/0:14,0:14:32.08:0,32,971	0/1:7,0:3:0.54:5,0,1	0/0:7,0:3:5.23:0,5,51	1/1:0,16:16:3:27,3,0	0/0:26,0:26:64.89:0,65,1494	0/0:30,0:30:77.03:0,77,1466	0/1:23,0:23:75.01:75,0,98	0/0:29,0:29:72.52:0,73,1749	0/0:23,0:23:57.83:0,58,1119	0/0:11,0:11:27.01:0,27,410	0/0:17,0:17:41.66:0,42,1164	1/1:1,9:10:6.41:141,6,0	1/1:2,14:17:18.05:397,18,0	0/0:18,0:18:50.83:0,51,1117	0/0:17,0:17:51.05:0,51,1379	0/0:51,0:51:99:0,133,2927	0/0:27,0:27:59.97:0,60,1139	0/1:13,0:13:9.35:9,0,114	0/1:8,0:8:31.26:31,0,85	0/0:32,0:33:40.94:0,41,455	1/1:0,16:17:6.48:121,6,0	0/0:13,0:13:28.55:0,29,578	0/0:43,0:43:99:0,108,2153	1/1:2,17:20:21.04:467,21,0	0/1:27,0:27:99:166,0,242	0/1:13,0:13:29.87:175,0,30	0/1:14,0:13:22.35:208,0,22
chr10	83602535	.	TGC	T	1329.14	PASS	AB=0.929;AC=21;AF=0.375;AN=56;BaseQRankSum=12.918;DP=582;FS=2.482;HRun=0;HaplotypeScore=128.7423;InbreedingCoeff=0.3570;MQ=59.11;MQ0=4;MQRankSum=-6.267;QD=5.75;ReadPosRankSum=-0.037;VQSLOD=3.4337;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:47.99:0,48,503	0/0:14,0:14:26.42:0,26,562	1/1:8,0:3:3.13:9,3,0	0/1:9,0:4:1.27:12,0,1	0/1:17,0:16:0:0,0,0	0/0:28,0:28:70.85:0,71,989	0/0:31,1:32:2.46:0,2,516	0/1:21,1:22:52.37:134,0,52	0/0:30,0:30:76.28:0,76,1060	0/1:22,0:22:0.41:0,0,551	0/1:11,0:11:19.11:19,0,197	0/0:19,0:19:46.83:0,47,736	1/1:10,0:10:8.64:67,9,0	1/1:16,0:16:17.86:126,18,0	0/0:18,0:18:19.11:0,19,666	0/0:17,0:17:51.05:0,51,796	0/0:50,0:50:73.32:0,73,1350	0/0:26,0:26:40.18:0,40,675	0/1:14,0:14:37.84:86,0,38	1/1:4,5:9:19.14:151,19,0	0/0:32,0:31:40.86:0,41,310	1/1:17,0:17:5.95:43,6,0	0/0:14,0:14:31.55:0,32,399	0/0:39,0:39:53.69:0,54,1164	1/1:20,0:20:20.83:149,21,0	0/1:23,3:26:28.04:257,0,28	0/1:11,4:15:29.76:220,0,30	0/1:9,6:14:11.07:234,0,11
chr10	83602537	.	CGT	C	738.64	PASS	AB=0.944;AC=22;AF=0.407;AN=54;BaseQRankSum=8.122;DP=593;FS=1.100;HRun=0;HaplotypeScore=130.4109;InbreedingCoeff=-0.0278;MQ=58.65;MQ0=4;MQRankSum=-4.718;QD=2.19;ReadPosRankSum=0.525;VQSLOD=2.5904;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:33:30.01:0,30,285	0/0:15,0:15:1.67:0,2,445	./.	0/1:10,0:4:14.72:15,0,16	1/1:17,0:16:2.84:14,3,0	0/0:28,1:29:16.70:0,17,698	0/0:26,0:33:40.18:0,40,498	0/1:20,1:22:34.66:35,0,70	0/0:30,0:30:22.74:0,23,783	0/1:20,4:24:95.44:95,0,377	0/1:10,2:12:50.78:51,0,135	0/0:19,0:19:1.73:0,2,548	1/1:10,0:10:6.68:39,7,0	1/1:16,0:16:17.44:103,17,0	0/0:18,1:19:4.66:0,5,519	0/0:18,0:18:42.14:0,42,642	0/1:42,7:50:91.18:91,0,855	0/1:20,1:25:1.38:1,0,391	0/1:14,0:14:6.81:7,0,27	0/1:9,0:9:15.71:20,0,16	0/0:26,0:36:5.19:0,5,55	1/1:17,0:17:5.76:31,6,0	0/0:13,1:14:21.07:0,21,323	0/1:33,5:38:80.75:81,0,640	1/1:20,0:20:20.22:112,20,0	0/1:24,0:24:46.23:46,0,184	0/1:13,1:14:47.24:83,0,47	0/1:14,0:14:43.17:81,0,43
chr10	83602762	.	CTTGT	C	4693.40	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=13.317;DP=615;FS=3.719;HRun=0;HaplotypeScore=127.7920;InbreedingCoeff=0.8026;MQ=64.74;MQ0=0;MQRankSum=-10.392;QD=16.02;ReadPosRankSum=0.402;VQSLOD=4.2746;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:21.10:165,0,21	0/0:10,0:10:18.06:0,18,392	0/0:16,0:15:2.98:0,3,22	0/0:23,0:23:2.98:0,3,194	1/1:24,0:24:29.97:374,30,0	0/0:20,0:20:48.15:0,48,1036	0/1:18,0:18:56.72:57,0,62	1/1:34,0:33:28.64:246,29,0	1/1:7,15:22:33.11:522,33,0	0/0:13,0:13:18.06:0,18,403	0/0:15,0:15:24.08:0,24,527	0/0:24,0:24:45.15:0,45,1038	1/1:15,0:15:29.58:379,30,0	1/1:20,0:20:27.09:392,27,0	0/0:25,0:25:51.16:0,51,1103	0/0:23,0:23:36.12:0,36,827	0/0:32,0:32:78.23:0,78,1690	0/0:30,0:30:60.20:0,60,1315	1/1:20,0:20:16.76:243,17,0	1/1:18,0:18:27.07:361,27,0	0/0:31,0:31:42.13:0,42,801	1/1:17,0:17:33.06:456,33,0	0/0:18,0:18:39.12:0,39,851	0/0:42,0:42:90.31:0,90,1996	1/1:21,0:21:34.51:425,35,0	1/1:31,0:31:44.51:584,45,0	1/1:16,0:16:17.88:236,18,0	1/1:13,0:13:18.05:253,18,0
chr10	83602787	.	TTG	T	392.18	PASS	AB=0.947;AC=8;AF=0.143;AN=56;BaseQRankSum=13.385;DP=643;FS=0.000;HRun=0;HaplotypeScore=131.9917;InbreedingCoeff=-0.1670;MQ=53.52;MQ0=4;MQRankSum=-9.727;QD=2.48;ReadPosRankSum=9.079;VQSLOD=1.1701;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,8:24:99:304,0,244	0/0:11,0:11:33.10:0,33,548	0/0:30,0:17:32.23:0,32,445	0/0:33,0:23:57.20:0,57,747	0/0:25,0:25:22.56:0,23,376	0/0:22,0:22:66.21:0,66,1144	0/1:15,4:19:99:149,0,276	0/0:40,0:38:86.41:0,86,741	0/1:26,0:26:5.37:5,0,350	0/0:14,0:14:42.14:0,42,722	0/0:13,0:13:39.12:0,39,646	0/0:24,0:24:66.20:0,66,1112	0/1:15,0:15:12.37:12,0,129	0/0:20,0:20:3.09:0,3,336	0/0:29,0:29:87.28:0,87,1481	0/0:18,0:18:51.17:0,51,922	0/0:35,0:35:99:0,105,1876	0/0:32,0:32:96.12:0,96,1590	0/0:19,0:19:16.79:0,17,311	0/0:17,0:17:5.23:0,5,215	0/0:24,0:24:45.15:0,45,837	0/1:22,0:22:7.50:8,0,228	0/0:22,0:22:66.22:0,66,1172	0/0:41,0:41:99:0,122,2146	0/1:19,0:19:19.60:20,0,134	0/1:22,0:22:9.49:9,0,171	0/0:16,0:16:13.13:0,13,243	0/1:11,0:11:10.68:11,0,145
chr10	83602789	.	G	GTT	2685.07	PASS	AB=0.957;AC=13;AF=0.232;AN=56;BaseQRankSum=9.322;DP=633;FS=6.358;HRun=3;HaplotypeScore=124.1067;InbreedingCoeff=0.0225;MQ=53.55;MQ0=4;MQRankSum=-7.883;QD=10.83;ReadPosRankSum=2.000;VQSLOD=0.4482;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:11.75:12,0,215	0/0:11,0:11:30.10:0,30,419	0/0:28,0:16:15.61:0,16,331	0/0:29,0:21:50.51:0,51,612	0/1:22,5:27:99:260,0,111	0/0:21,0:21:63.21:0,63,881	0/0:18,0:18:16.86:0,17,228	0/1:27,11:38:99:605,0,144	0/0:25,0:25:56.72:0,57,551	0/0:14,0:14:42.14:0,42,586	0/0:12,0:12:36.12:0,36,500	0/0:21,0:21:63.20:0,63,863	0/1:15,0:15:20.66:249,0,21	0/1:19,0:19:98.02:98,0,105	0/0:28,0:28:81.27:0,81,1131	0/0:17,0:17:51.17:0,51,713	0/0:36,0:36:99:0,108,1446	0/0:32,0:32:96.08:0,96,1254	0/1:19,0:19:77.03:189,0,77	0/1:18,0:18:52.46:136,0,52	0/0:24,0:24:42.05:0,42,486	0/1:19,2:21:64.35:191,0,64	0/0:24,0:24:66.22:0,66,919	0/0:42,0:42:99:0,123,1674	1/1:18,0:18:32.19:398,32,0	0/1:22,0:22:0.09:419,0,0	0/1:16,0:16:86.09:130,0,86	0/1:11,0:11:3.36:160,0,3
chr10	83602791	.	TTG	T	5349.99	PASS	AB=0.948;AC=24;AF=0.429;AN=56;BaseQRankSum=14.412;DP=628;FS=9.213;HRun=0;HaplotypeScore=116.5731;InbreedingCoeff=0.7168;MQ=55.21;MQ0=4;MQRankSum=-1.188;QD=18.84;ReadPosRankSum=-1.436;VQSLOD=4.4822;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:10.11:143,0,10	0/0:10,0:10:30.10:0,30,524	0/0:30,0:17:26.41:0,26,450	0/0:29,0:21:51.08:0,51,732	1/1:14,11:25:44.44:410,44,0	0/0:21,0:21:63.21:0,63,1117	0/1:18,0:18:57.89:58,0,68	1/1:33,5:38:78.33:666,78,0	0/1:24,0:24:14.31:14,0,279	0/0:14,0:14:42.14:0,42,721	0/0:12,0:12:36.12:0,36,621	0/0:22,0:22:66.22:0,66,1145	1/1:6,8:14:29.41:388,29,0	1/1:11,7:18:43.90:447,44,0	0/0:28,0:28:81.27:0,81,1416	0/0:17,0:17:51.17:0,51,922	0/0:36,0:36:99:0,108,1922	0/0:32,0:32:96.15:0,96,1577	0/1:14,5:19:80.56:391,0,81	1/1:9,8:17:47.56:426,48,0	0/0:24,0:24:42.14:0,42,796	1/1:10,10:20:49.40:515,49,0	0/0:25,0:25:75.24:0,75,1284	0/0:42,0:42:99:0,122,2142	1/1:7,11:18:49.85:563,50,0	1/1:9,14:23:63.74:708,64,0	1/1:11,4:15:33.46:329,33,0	1/1:5,5:10:23.37:293,23,0
chr10	83602793	.	GTTTGTT	G	3725.19	PASS	AB=0.947;AC=25;AF=0.446;AN=56;BaseQRankSum=16.253;DP=623;FS=3.787;HRun=0;HaplotypeScore=169.7995;InbreedingCoeff=0.8851;MQ=55.07;MQ0=4;MQRankSum=-3.469;QD=14.90;ReadPosRankSum=-2.752;VQSLOD=2.8799;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,8:25:38.80:603,39,0	0/0:11,0:11:30.10:0,30,803	0/0:31,0:17:39.56:0,40,524	0/0:31,0:21:52.25:0,52,863	1/1:21,0:22:11.38:194,11,0	0/0:21,0:21:57.20:0,57,1650	1/1:14,4:18:2.08:257,2,0	1/1:34,0:34:16.32:261,16,0	0/0:24,0:24:46.94:0,47,393	0/0:14,0:14:39.13:0,39,1115	0/0:14,0:14:39.11:0,39,902	0/0:24,0:24:69.24:0,69,1818	1/1:14,0:14:22.17:251,22,0	1/1:19,0:19:29.94:286,30,0	0/0:27,0:27:75.26:0,75,2029	0/0:18,0:18:51.17:0,51,1506	0/0:37,0:37:99:0,102,2889	0/0:31,0:31:90.20:0,90,2229	0/1:17,0:18:99:202,0,130	1/1:17,0:17:39.63:256,40,0	0/0:23,0:23:39.13:0,39,1003	1/1:20,0:20:36.12:317,36,0	0/0:25,0:25:72.25:0,72,1960	0/0:41,0:41:99:0,111,3175	1/1:17,0:17:38.69:312,39,0	1/1:22,0:22:55.36:447,55,0	1/1:16,0:16:12.36:180,12,0	1/1:8,0:8:13.26:159,13,0
chr10	83602797	.	GTT	G	4568.32	PASS	AB=0.886;AC=24;AF=0.429;AN=56;BaseQRankSum=16.117;DP=624;FS=2.694;HRun=5;HaplotypeScore=119.0299;InbreedingCoeff=0.8853;MQ=55.88;MQ0=4;MQRankSum=-1.114;QD=18.50;ReadPosRankSum=-1.971;VQSLOD=1.5726;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:38.72:350,39,0	0/0:12,0:12:33.11:0,33,556	0/0:33,0:19:48.45:0,48,607	0/0:34,0:23:61.24:0,61,859	1/1:9,12:21:25.22:285,25,0	0/0:21,0:21:57.19:0,57,998	0/1:17,0:17:0.06:168,0,0	1/1:27,5:32:48.44:383,48,0	0/0:23,0:23:16.63:0,17,337	0/0:14,0:14:42.11:0,42,698	0/0:13,0:13:39.11:0,39,609	0/0:24,0:24:69.24:0,69,1181	1/1:7,7:14:22.25:334,22,0	1/1:13,7:20:40.69:408,41,0	0/0:27,0:27:75.26:0,75,1288	0/0:18,0:18:51.17:0,51,897	0/0:35,0:35:99:0,102,1755	0/0:32,0:32:96.22:0,96,1523	0/1:12,5:17:99:304,0,127	1/1:8,8:16:39.83:338,40,0	0/0:24,0:24:39.07:0,39,455	1/1:10,10:20:42.83:435,43,0	0/0:25,0:25:72.25:0,72,1234	0/0:40,0:40:99:0,112,1941	1/1:9,8:17:41.92:411,42,0	1/1:10,13:23:60.80:636,61,0	1/1:11,4:15:29.34:302,29,0	1/1:3,5:8:13.36:214,13,0
chr10	83602799	.	T	TTTTG	7257.05	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=8.278;DP=632;FS=1.444;HRun=0;HaplotypeScore=137.5100;InbreedingCoeff=0.9870;MQ=56.76;MQ0=4;MQRankSum=-3.035;QD=26.20;ReadPosRankSum=-2.600;VQSLOD=4.4530;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:58.99:780,59,0	0/0:12,0:12:33.11:0,33,537	0/0:36,0:20:47.77:0,48,635	0/0:36,0:25:53.36:0,53,663	1/1:21,0:21:27.77:503,28,0	0/0:20,0:20:48.16:0,48,804	1/1:18,0:18:42.11:522,42,0	1/1:32,0:32:78.25:1152,78,0	0/0:23,0:23:57.19:0,57,822	0/0:15,0:15:42.08:0,42,677	0/0:13,0:13:33.11:0,33,553	0/0:23,0:23:63.22:0,63,1041	1/1:15,0:15:28.85:255,29,0	1/1:20,0:20:54.36:597,54,0	0/0:25,0:25:69.24:0,69,1152	0/0:19,0:19:48.16:0,48,804	0/0:35,0:35:90.31:0,90,1497	0/0:33,0:33:83.77:0,84,1351	1/1:18,0:18:7.21:387,7,0	1/1:16,0:16:40.83:503,41,0	1/1:5,20:25:30.10:716,30,0	1/1:21,0:21:45.70:482,46,0	0/0:25,0:25:66.22:0,66,1078	0/0:40,0:40:99:0,99,1626	1/1:16,0:16:29.69:225,30,0	1/1:25,0:25:51.26:499,51,0	1/1:15,0:15:39.84:508,40,0	1/1:8,0:8:17.97:128,18,0
chr10	83604098	.	A	AG	9808.14	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=12.975;DP=635;FS=4.608;HRun=2;HaplotypeScore=94.8048;InbreedingCoeff=0.9981;MQ=86.34;MQ0=1;MQRankSum=-1.508;QD=36.73;ReadPosRankSum=-0.405;VQSLOD=4.8635;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1226	0/0:9,0:9:24.07:0,24,295	0/0:30,0:29:47.43:0,47,845	0/0:48,0:42:99:0,117,1295	1/1:2,14:16:36.12:518,36,0	0/0:26,0:26:75.22:0,75,915	1/1:6,33:39:84.28:1202,84,0	1/1:0,23:23:69.18:944,69,0	0/0:20,0:20:57.18:0,57,706	0/0:25,0:25:72.22:0,72,882	0/0:8,0:8:18.06:0,18,223	0/0:30,0:30:84.26:0,84,1040	1/1:3,15:18:45.15:647,45,0	1/1:1,23:24:60.20:863,60,0	0/0:12,0:12:35.78:0,36,420	0/0:12,0:12:36.11:0,36,446	0/0:29,0:29:78.24:0,78,967	0/0:25,0:25:72.18:0,72,875	1/1:1,12:13:36.07:476,36,0	1/1:0,12:12:33.11:475,33,0	1/1:4,51:55:99:1986,138,0	1/1:0,11:11:33.11:471,33,0	0/0:16,0:16:42.13:0,42,520	0/0:44,0:44:99:0,129,1536	1/1:0,11:11:30.10:432,30,0	1/1:2,18:20:54.18:770,54,0	1/1:0,17:16:48.16:689,48,0	1/1:0,8:8:24.08:335,24,0
chr10	83606100	.	C	CG	758.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.010;DP=549;FS=0.000;HRun=4;HaplotypeScore=74.5858;InbreedingCoeff=0.9711;MQ=85.93;MQ0=1;MQRankSum=-1.129;QD=29.17;ReadPosRankSum=-1.059;VQSLOD=2.8563;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:26:63.21:853,63,0	0/0:7,0:7:18.04:0,18,196	0/0:15,0:15:29.25:0,29,352	0/0:23,0:23:61.98:0,62,674	0/0:24,0:24:48.13:0,48,538	0/0:12,0:12:33.05:0,33,360	0/0:31,0:31:90.20:0,90,987	0/0:20,0:20:51.13:0,51,570	0/0:14,0:14:30.07:0,30,330	0/0:15,0:15:39.09:0,39,431	0/0:14,0:14:39.10:0,39,433	0/0:14,0:14:36.10:0,36,408	0/0:17,0:17:39.05:0,39,412	0/0:22,0:22:51.14:0,51,577	0/0:19,0:19:51.13:0,51,569	0/0:15,0:15:39.11:0,39,442	0/0:32,0:32:87.25:0,87,986	0/0:26,0:25:68:0,68,780	0/0:11,0:11:21.06:0,21,238	0/0:16,0:16:39.10:0,39,433	0/0:29,0:29:69.18:0,69,771	0/0:19,0:19:39.11:0,39,441	0/0:18,0:18:48.09:0,48,529	0/0:42,0:42:99:0,108,1200	0/0:28,0:27:78.22:0,78,879	0/0:20,0:20:54.15:0,54,604	0/0:15,0:15:45.13:0,45,507	0/0:5,0:5:15.04:0,15,170
chr10	83606152	.	TACACACAC	T	4754.83	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.523;DP=551;FS=0.000;HRun=0;HaplotypeScore=168.6621;InbreedingCoeff=0.8921;MQ=61.91;MQ0=6;MQRankSum=-10.414;QD=31.08;ReadPosRankSum=0.142;VQSLOD=4.2536;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:7.40:0,7,168	0/0:5,0:6:7.58:0,8,209	0/0:22,0:13:3.01:0,3,47	0/0:18,0:10:3.01:0,3,87	1/1:7,16:23:35.97:432,36,0	0/0:18,0:18:30.10:0,30,1042	1/1:11,8:19:9.03:189,9,0	0/0:21,0:21:33.11:0,33,890	0/0:15,0:14:33.11:0,33,1344	0/0:24,0:24:57.15:0,57,1654	0/0:15,0:15:32.69:0,33,1187	0/0:19,0:20:50.73:0,51,1799	1/1:2,14:16:33.11:839,33,0	1/1:13,9:22:19.41:565,19,0	0/0:19,0:19:45.15:0,45,1739	0/0:17,0:17:45.15:0,45,1712	0/0:33,0:35:81.25:0,81,2783	0/0:25,0:26:48.16:0,48,1618	0/0:8,0:11:17.27:0,17,411	0/0:10,0:23:22.28:0,22,392	0/0:16,0:16:10.49:0,10,185	1/1:14,9:23:24.07:412,24,0	0/0:17,0:17:29.30:0,29,1025	0/0:29,0:30:53.82:0,54,1892	1/1:7,16:24:54.17:1172,54,0	1/1:9,11:20:33.11:840,33,0	0/0:10,0:18:21.03:0,21,575	1/1:2,4:6:12.04:305,12,0
chr10	83606197	.	T	TA	439.56	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.833;DP=508;FS=8.566;HRun=8;HaplotypeScore=109.4170;InbreedingCoeff=0.9743;MQ=60.19;MQ0=5;MQRankSum=1.135;QD=20.93;ReadPosRankSum=-2.079;VQSLOD=2.1598;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:20:48.07:534,48,0	0/0:6,0:6:18:0,18,160	0/0:29,0:14:32.33:0,32,264	0/0:25,0:13:26.47:0,26,214	0/0:20,0:20:41.75:0,42,349	0/0:13,0:13:36.02:0,36,329	0/0:17,0:17:35.97:0,36,319	0/0:15,0:15:36.02:0,36,330	0/0:15,0:14:39:0,39,348	0/0:22,0:21:45.01:0,45,412	0/0:12,0:12:33.02:0,33,302	0/0:20,0:20:54.02:0,54,494	0/0:20,0:20:35.98:0,36,318	0/0:15,0:15:29.94:0,30,264	0/0:22,0:21:57.02:0,57,518	0/0:13,0:13:30.01:0,30,274	0/0:34,0:34:84.02:0,84,765	0/0:19,0:19:57.03:0,57,520	0/0:23,0:23:57.01:0,57,516	0/0:25,0:25:69.02:0,69,626	0/0:10,0:10:23.94:0,24,220	0/0:9,0:9:21.01:0,21,190	0/0:16,0:16:41.68:0,42,362	0/0:22,0:22:53.98:0,54,482	0/0:24,0:24:66.03:0,66,597	0/0:20,0:19:50.34:0,50,436	0/0:15,0:15:30.01:0,30,274	0/0:6,0:6:18.01:0,18,163
chr10	83606398	.	C	CAAT	1963.92	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.669;DP=663;FS=2.317;HRun=0;HaplotypeScore=94.1740;InbreedingCoeff=0.9992;MQ=86.70;MQ0=0;MQRankSum=-3.509;QD=43.64;ReadPosRankSum=3.529;VQSLOD=5.3242;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,43:45:93.23:2059,93,0	0/0:10,0:10:30.10:0,30,488	0/0:29,0:29:69.85:0,70,1160	0/0:18,0:18:44.37:0,44,639	0/0:21,0:21:63.20:0,63,1020	0/0:19,0:19:57.18:0,57,919	0/0:23,0:23:63.20:0,63,1047	0/0:38,0:38:99:0,108,1741	0/0:15,0:15:45.14:0,45,728	0/0:21,0:21:63.21:0,63,1051	0/0:21,0:21:62.39:0,62,972	0/0:31,0:31:93.25:0,93,1430	0/0:15,0:15:45.11:0,45,701	0/0:19,0:19:48.16:0,48,817	0/0:25,0:25:66.18:0,66,1041	0/0:20,0:20:60.14:0,60,989	0/0:32,0:32:93.24:0,93,1469	0/0:16,0:16:45.12:0,45,707	0/0:32,0:32:96.19:0,96,1542	0/0:22,0:22:57:0,57,873	0/0:23,0:23:69.23:0,69,1137	0/0:15,0:15:39.13:0,39,663	0/0:23,0:23:66.20:0,66,1091	0/0:32,0:32:84.22:0,84,1351	0/0:26,0:26:72.20:0,72,1194	0/0:38,0:38:99:0,114,1894	0/0:22,0:21:63.19:0,63,1045	0/0:12,0:12:36.12:0,36,608
chr10	83607296	.	T	TC	154.97	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.509;DP=563;FS=3.464;HRun=0;HaplotypeScore=65.0068;InbreedingCoeff=0.8904;MQ=81.50;MQ0=0;MQRankSum=-2.412;QD=22.14;ReadPosRankSum=-1.487;VQSLOD=4.5698;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:18.06:245,18,0	0/0:2,0:2:6.02:0,6,84	0/0:22,0:21:45.19:0,45,708	0/0:33,0:32:83.57:0,84,1067	0/0:23,0:23:69.17:0,69,900	0/0:20,0:20:57.19:0,57,785	0/0:20,0:20:59.21:0,59,785	0/0:27,0:27:75.22:0,75,1001	0/0:28,0:28:81.26:0,81,1114	0/0:11,0:11:33.11:0,33,461	0/0:16,0:16:48.10:0,48,627	0/0:24,0:24:69.20:0,69,926	0/0:16,0:16:45.13:0,45,606	0/0:17,0:17:51.17:0,51,697	0/0:19,0:19:57.19:0,57,797	0/0:24,0:24:72.23:0,72,989	0/0:33,0:33:96.22:0,96,1280	0/0:22,0:22:66.22:0,66,913	0/0:20,0:20:57.17:0,57,765	0/0:12,0:12:36.12:0,36,503	0/0:30,0:30:87.29:0,87,1208	0/0:22,0:22:63.21:0,63,877	0/0:17,0:17:51.17:0,51,707	0/0:32,0:32:95.30:0,95,1279	0/0:8,0:8:21.07:0,21,294	0/0:22,0:22:66.21:0,66,897	0/0:29,0:29:84.28:0,84,1161	0/0:7,0:7:21.07:0,21,284
chr10	83607326	.	TGTTTGATTGGTTGGTTGGTA	T	531.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.817;DP=540;FS=4.684;HRun=0;HaplotypeScore=274.6402;InbreedingCoeff=0.9523;MQ=68.06;MQ0=1;MQRankSum=-3.472;QD=88.64;ReadPosRankSum=0.959;VQSLOD=2.9048;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,5:6:14.97:620,15,0	0/0:4,0:4:12.04:0,12,943	0/0:36,0:33:86.98:0,87,2851	0/0:24,0:23:56.59:0,57,2454	0/0:19,0:19:54.17:0,54,3933	0/0:21,0:21:51.14:0,51,3555	0/0:14,0:14:42.13:0,42,2711	0/0:30,0:30:81.27:0,81,5109	0/0:25,0:25:66.23:0,66,5561	0/0:12,0:12:36.12:0,36,3188	0/0:16,0:16:42.11:0,42,2738	0/0:20,0:20:60.17:0,60,3789	0/0:12,0:12:36.12:0,36,2641	0/0:11,0:11:30.10:0,30,2359	0/0:17,0:17:48.14:0,48,3346	0/0:25,0:25:72.15:0,72,5294	0/0:34,0:34:99:0,99,7610	0/0:18,0:18:54.15:0,54,4001	0/0:18,0:18:42.12:0,42,2223	0/0:11,0:11:33.09:0,33,2115	0/0:30,0:29:75.24:0,75,6013	0/0:18,0:18:50.83:0,51,3216	0/0:19,0:19:54.12:0,54,3928	0/0:30,0:30:87.20:0,87,6195	0/0:10,0:10:30.09:0,30,2241	0/0:22,0:22:66.23:0,66,4830	0/0:26,0:26:78.22:0,78,6376	0/0:11,0:11:33.11:0,33,2925
chr10	83607433	.	GCCCCACCACCCCCCC	G	1878.07	PASS	AC=14;AF=0.269;AN=52;BaseQRankSum=5.510;DP=256;FS=0.000;HRun=0;HaplotypeScore=102.9723;InbreedingCoeff=0.7578;MQ=61.58;MQ0=2;MQRankSum=-5.153;QD=36.82;ReadPosRankSum=2.406;VQSLOD=2.3290;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:3,0:3:9.03:0,9,632	0/0:17,0:8:0.94:0,1,717	0/0:19,0:11:24.08:0,24,1041	1/1:4,9:13:3.01:135,3,0	0/0:11,0:11:26.96:0,27,1258	1/1:2,0:5:9.03:352,9,0	0/0:13,0:13:36.12:0,36,2210	0/0:10,0:10:21.06:0,21,1080	0/0:10,0:10:17.87:0,18,960	0/0:6,0:6:15.05:0,15,974	0/0:13,0:13:30.57:0,31,1769	1/1:3,5:8:9.03:402,9,0	1/1:2,4:6:3.01:135,3,0	0/0:4,0:4:12.04:0,12,690	0/0:5,0:5:12.04:0,12,724	0/0:15,0:15:42.14:0,42,2589	0/0:9,0:9:27.09:0,27,1609	0/0:9,0:9:24.08:0,24,1136	0/0:5,0:5:15.05:0,15,726	0/0:10,0:10:9.03:0,9,502	./.	0/0:4,0:4:9.03:0,9,343	0/0:14,0:14:36.10:0,36,1569	1/1:1,4:4:6.02:270,6,0	1/1:5,1:11:21.07:614,21,0	0/0:9,0:9:24.05:0,24,1015	1/1:1,2:3:3.01:131,3,0
chr10	83607480	.	GC	G	732.40	PASS	AB=1.000;AC=19;AF=0.864;AN=22;BaseQRankSum=-3.002;DP=60;FS=7.404;HRun=1;HaplotypeScore=21.7210;InbreedingCoeff=0.3152;MQ=80.13;MQ0=0;MQRankSum=-3.150;QD=19.27;ReadPosRankSum=-0.408;VQSLOD=3.0073;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:3,0:3:8.69:0,9,70	0/1:4,0:2:2.33:2,0,7	./.	1/1:0,4:4:6.02:84,6,0	./.	1/1:0,1:1:3.01:42,3,0	1/1:0,4:4:3.01:42,3,0	1/1:0,6:6:18.06:251,18,0	./.	./.	./.	./.	./.	./.	./.	1/1:0,2:2:6.02:84,6,0	1/1:0,2:2:6.02:84,6,0	1/1:1,2:3:3:25,3,0	1/1:0,6:6:3.01:42,3,0	./.	./.	./.	./.	./.	1/1:0,6:6:12.04:167,12,0	./.
chr10	83608004	.	A	AAAAAAAG	9483.39	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=5.946;DP=562;FS=18.666;HRun=0;HaplotypeScore=145.3708;InbreedingCoeff=0.9742;MQ=60.17;MQ0=5;MQRankSum=-12.852;QD=53.28;ReadPosRankSum=-5.083;VQSLOD=2.3952;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:57.18:970,57,0	0/0:8,0:8:24.08:0,24,560	0/0:13,0:7:17.98:0,18,226	0/0:13,0:9:4.22:0,4,202	1/1:22,10:32:60.15:1676,60,0	0/0:26,0:26:69.23:0,69,1572	1/1:10,7:16:30.09:1053,30,0	0/0:21,0:21:39.13:0,39,786	0/0:20,0:20:48.15:0,48,1035	0/0:24,0:24:45.12:0,45,961	0/0:18,0:18:45.12:0,45,982	0/0:20,0:20:45.11:0,45,1002	1/1:5,4:10:21.07:672,21,0	1/1:11,3:14:21.06:681,21,0	0/0:17,0:17:39.12:0,39,845	0/0:16,0:16:33.11:0,33,772	0/0:30,0:30:78.24:0,78,1709	0/0:25,0:25:57.18:0,57,1287	0/0:22,0:21:48.40:0,48,924	0/0:36,0:36:93.25:0,93,1986	0/0:14,0:14:27.09:0,27,607	1/1:9,7:16:27.09:838,27,0	0/0:15,0:15:36.11:0,36,798	0/0:17,0:17:42.14:0,42,938	1/1:17,5:24:39.12:1153,39,0	1/1:16,7:24:48.11:1443,48,0	0/0:29,0:28:54.15:0,54,1107	1/1:3,9:12:27.09:998,27,0
chr10	83608015	.	A	AAAG	2609.60	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=12.896;DP=570;FS=0.000;HRun=0;HaplotypeScore=117.3897;InbreedingCoeff=0.0232;MQ=63.55;MQ0=4;MQRankSum=-10.068;QD=15.08;ReadPosRankSum=3.982;VQSLOD=3.1300;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,21:29:60.75:1210,61,0	0/0:10,0:10:30.10:0,30,497	0/0:16,0:9:17.23:0,17,249	0/0:20,0:14:13.32:0,13,161	0/1:33,0:33:99:391,0,512	0/0:25,0:25:75.23:0,75,1190	0/1:13,0:13:99:268,0,107	0/0:18,0:18:48.02:0,48,639	0/0:18,0:18:51.17:0,51,840	0/0:23,0:23:66.20:0,66,1037	0/0:18,0:18:54.14:0,54,821	0/0:20,0:20:54.16:0,54,830	0/1:9,0:9:99:107,0,122	0/1:13,0:13:99:99,0,253	0/0:16,0:16:45.15:0,45,741	0/0:16,0:16:42.14:0,42,674	0/0:31,0:31:93.27:0,93,1456	0/0:24,0:24:66.21:0,66,1067	0/0:31,0:30:76.99:0,77,1019	0/0:34,0:34:99:0,102,1493	0/0:12,0:12:36.12:0,36,559	0/1:16,0:16:99:104,0,378	0/0:21,0:21:54.18:0,54,866	0/0:18,0:18:54.15:0,54,832	0/1:25,0:25:95.17:95,0,581	0/1:20,0:20:99:206,0,455	0/0:26,0:25:72.12:0,72,1015	0/1:15,0:15:99:280,0,189
chr10	83608255	.	A	AC	1584.42	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.992;DP=689;FS=1.294;HRun=5;HaplotypeScore=84.6266;InbreedingCoeff=0.9983;MQ=77.34;MQ0=0;MQRankSum=-3.324;QD=33.71;ReadPosRankSum=-0.034;VQSLOD=3.6023;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,36:47:99:1679,114,0	0/0:10,0:10:30.09:0,30,403	0/0:26,0:26:78.15:0,78,1047	0/0:26,0:25:72.03:0,72,894	0/0:25,0:25:67.10:0,67,923	0/0:24,0:24:72.24:0,72,1006	0/0:34,0:34:99:0,99,1331	0/0:31,0:31:87.26:0,87,1155	0/0:24,0:24:72.21:0,72,969	0/0:28,0:28:78.26:0,78,1075	0/0:22,0:22:60.10:0,60,775	0/0:34,0:34:99:0,102,1377	0/0:23,0:23:69.20:0,69,929	0/0:16,0:16:45.12:0,45,608	0/0:32,0:32:96.31:0,96,1318	0/0:28,0:28:84.28:0,84,1174	0/0:32,0:32:93.31:0,93,1295	0/0:20,0:20:60.14:0,60,796	0/0:17,0:17:51.17:0,51,712	0/0:22,0:22:66.22:0,66,920	0/0:23,0:23:66.22:0,66,921	0/0:15,0:15:45.14:0,45,609	0/0:12,0:12:36.11:0,36,486	0/0:35,0:35:99:0,102,1407	0/0:15,0:15:45.15:0,45,625	0/0:27,0:27:81.25:0,81,1095	0/0:32,0:31:93.31:0,93,1288	0/0:9,0:9:27.07:0,27,359
chr10	83608257	.	AG	A	750.95	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=10.737;DP=680;FS=0.580;HRun=1;HaplotypeScore=84.2705;InbreedingCoeff=0.9973;MQ=78.78;MQ0=0;MQRankSum=-4.053;QD=16.69;ReadPosRankSum=-1.210;VQSLOD=3.4041;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:42,3:45:99:846,124,0	0/0:10,0:10:30.07:0,30,433	0/0:26,0:26:78.21:0,78,1128	0/0:24,1:24:59.14:0,59,919	0/0:24,0:24:72.14:0,72,1043	0/0:25,0:25:75.22:0,75,1101	0/0:33,0:33:99:0,99,1463	0/0:29,0:29:84.27:0,84,1249	0/0:25,0:25:72.19:0,72,1017	0/0:27,0:27:81.26:0,81,1196	0/0:21,0:21:54.18:0,54,813	0/0:34,0:34:99:0,99,1465	0/0:23,0:23:69.15:0,69,1003	0/0:15,0:15:45.13:0,45,657	0/0:33,0:33:99:0,99,1442	0/0:28,0:28:84.26:0,84,1262	0/0:32,0:32:90.26:0,90,1328	0/0:18,0:18:54.18:0,54,824	0/0:17,0:17:51.17:0,51,778	0/0:24,0:24:69.18:0,69,1008	0/0:23,0:23:66.21:0,66,987	0/0:14,0:14:42.14:0,42,637	0/0:12,0:12:36.09:0,36,507	0/0:34,0:34:99:0,102,1512	0/0:16,0:16:48.14:0,48,708	0/0:27,0:27:78.25:0,78,1172	0/0:31,0:30:93.31:0,93,1403	0/0:9,0:9:24.08:0,24,367
chr10	83608336	.	G	GA	1656.55	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=10.158;DP=717;FS=2.067;HRun=1;HaplotypeScore=78.5873;InbreedingCoeff=0.9954;MQ=88.39;MQ0=0;MQRankSum=-3.976;QD=39.44;ReadPosRankSum=0.304;VQSLOD=4.1867;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:42:99:1751,117,0	0/0:13,0:13:39.13:0,39,505	0/0:27,0:27:75.22:0,75,941	0/0:29,0:29:77.89:0,78,960	0/0:27,0:27:78.25:0,78,1012	0/0:23,0:23:66.21:0,66,857	0/0:42,0:42:99:0,123,1596	0/0:25,0:25:72.23:0,72,935	0/0:25,0:25:69.22:0,69,896	0/0:31,0:31:93.30:0,93,1208	0/0:12,0:12:30.10:0,30,390	0/0:32,0:32:90.26:0,90,1139	0/0:17,0:17:51.17:0,51,662	0/0:7,0:7:21.06:0,21,258	0/0:39,0:39:99:0,117,1505	0/0:24,0:24:72.21:0,72,907	0/0:41,0:41:99:0,120,1538	0/0:19,0:19:57.19:0,57,740	0/0:23,0:23:69.22:0,69,895	0/0:27,0:27:72.23:0,72,932	0/0:24,0:24:69.22:0,69,894	0/0:22,0:22:66.20:0,66,843	0/0:21,0:21:63.20:0,63,816	0/0:33,0:33:96.28:0,96,1215	0/0:27,0:27:72.23:0,72,932	0/0:24,0:24:72.23:0,72,934	0/0:25,0:25:75.23:0,75,960	0/0:16,0:16:48.16:0,48,623
chr10	83608508	.	CAT	C	1602.64	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.743;DP=633;FS=13.683;HRun=0;HaplotypeScore=91.3465;InbreedingCoeff=0.9948;MQ=57.10;MQ0=2;MQRankSum=0.579;QD=30.82;ReadPosRankSum=-0.712;VQSLOD=4.7827;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,52:50:99:1698,111,0	0/0:9,0:9:27.09:0,27,519	0/0:14,0:8:24.08:0,24,420	0/0:18,0:10:27.09:0,27,516	0/0:19,0:19:51.17:0,51,984	0/0:29,0:28:84.29:0,84,1607	0/0:22,0:22:66.23:0,66,1258	0/0:25,0:25:75.26:0,75,1437	0/0:22,0:22:66.23:0,66,1263	0/0:20,0:20:60.21:0,60,1159	0/0:14,0:14:39.12:0,39,697	0/0:24,0:24:72.25:0,72,1381	0/0:21,0:21:63.22:0,63,1214	0/0:10,0:10:30.10:0,30,580	0/0:29,0:29:87.30:0,87,1680	0/0:21,0:21:63.22:0,63,1200	0/0:41,0:41:99:0,117,2245	0/0:29,0:29:87.30:0,87,1653	0/0:17,0:15:45.13:0,45,832	0/0:36,0:36:99:0,105,1998	0/0:29,0:29:87.30:0,87,1654	0/0:13,0:13:39.13:0,39,753	0/0:19,0:19:57.20:0,57,1100	0/0:19,0:19:54.19:0,54,1043	0/0:25,0:25:75.26:0,75,1429	0/0:17,0:17:51.17:0,51,981	0/0:29,0:29:87.30:0,87,1679	0/0:10,0:10:30.06:0,30,541
chr10	83608653	.	T	TCCG	532.64	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.154;DP=655;FS=4.987;HRun=0;HaplotypeScore=102.7806;InbreedingCoeff=0.9907;MQ=64.54;MQ0=1;MQRankSum=-5.054;QD=48.42;ReadPosRankSum=-0.175;VQSLOD=5.1660;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:11:27.09:627,27,0	0/0:12,0:12:36.12:0,36,665	0/0:15,0:15:38.92:0,39,554	0/0:8,0:7:18.06:0,18,335	0/0:28,0:28:84.29:0,84,1562	0/0:28,0:27:81.28:0,81,1502	0/0:12,0:12:36.12:0,36,671	0/0:27,0:27:81.24:0,81,1421	0/0:18,0:18:51.17:0,51,920	0/0:21,0:21:60.19:0,60,1088	0/0:14,0:14:42.14:0,42,757	0/0:22,0:22:66.20:0,66,1168	0/0:22,0:22:66.21:0,66,1199	0/0:18,0:18:51.16:0,51,916	0/0:37,0:37:99:0,111,2002	0/0:22,0:22:66.23:0,66,1225	0/0:50,0:50:99:0,144,2606	0/0:38,0:38:99:0,114,2119	0/0:22,0:22:63.19:0,63,1084	0/0:22,0:22:66.20:0,66,1157	0/0:40,0:39:99:0,114,2092	0/0:20,0:20:60.19:0,60,1075	0/0:18,0:18:54.16:0,54,945	0/0:27,0:27:78.27:0,78,1454	0/0:18,0:18:54.19:0,54,1007	0/0:22,0:22:66.22:0,66,1190	0/0:39,0:39:99:0,117,2148	0/0:24,0:24:72.25:0,72,1334
chr10	83608657	.	T	TAGCTGTCTGCTGAGAGG	3491.75	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.673;DP=662;FS=6.620;HRun=0;HaplotypeScore=292.6825;InbreedingCoeff=0.9914;MQ=64.21;MQ0=1;MQRankSum=-6.386;QD=174.59;ReadPosRankSum=0.027;VQSLOD=2.8575;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,9:20:51.15:3492,51,0	0/0:11,0:11:33.11:0,33,1564	0/0:15,0:14:35.48:0,35,1160	0/0:9,0:7:18.03:0,18,705	0/0:30,0:30:90.31:0,90,4014	0/0:28,0:27:78.27:0,78,3692	0/0:12,0:12:36.12:0,36,1698	0/0:24,0:24:69.24:0,69,3120	0/0:18,0:18:54.19:0,54,2388	0/0:20,0:20:60.21:0,60,2776	0/0:13,0:13:39.13:0,39,1947	0/0:22,0:22:63.22:0,63,3108	0/0:22,0:22:66.23:0,66,3201	0/0:18,0:18:51.16:0,51,2368	0/0:38,0:38:99:0,114,5296	0/0:23,0:23:69.24:0,69,3367	0/0:49,0:49:99:0,147,6321	0/0:40,0:40:99:0,114,5153	0/0:20,0:20:57.19:0,57,2360	0/0:23,0:23:69.24:0,69,3284	0/0:39,0:38:99:0,111,5039	0/0:21,0:21:60.21:0,60,2819	0/0:17,0:17:51.16:0,51,2286	0/0:28,0:28:78.27:0,78,3719	0/0:20,0:20:57.20:0,57,2685	0/0:21,0:21:60.21:0,60,2858	0/0:41,0:41:99:0,120,5865	0/0:20,0:20:60.21:0,60,2545
chr10	83609170	.	AT	A	517.80	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=6.106;DP=523;FS=3.109;HRun=5;HaplotypeScore=52.2344;InbreedingCoeff=0.7690;MQ=76.35;MQ0=0;MQRankSum=-3.182;QD=13.99;ReadPosRankSum=2.374;VQSLOD=2.2140;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:54.15:612,54,0	0/0:12,0:12:36.12:0,36,492	0/1:15,0:13:1.07:1,0,292	0/0:14,0:14:32.98:0,33,374	0/0:26,0:26:72.20:0,72,964	0/0:24,0:24:72.24:0,72,984	0/0:17,0:17:51.17:0,51,698	0/0:22,0:22:60.20:0,60,821	0/0:13,0:13:39.13:0,39,533	0/0:18,0:18:48.15:0,48,643	0/0:13,0:13:36.12:0,36,492	0/0:17,0:17:48.11:0,48,620	0/0:16,0:16:48.16:0,48,656	0/0:13,0:13:39.12:0,39,517	0/0:14,0:14:42.13:0,42,558	0/0:13,0:13:39.13:0,39,533	0/0:29,0:29:84.28:0,84,1148	0/0:20,0:20:48.14:0,48,639	0/0:26,0:26:72.23:0,72,970	0/0:17,0:16:48.16:0,48,655	0/0:27,0:27:78.25:0,78,1050	0/0:20,0:20:51.15:0,51,668	0/0:12,0:12:33.10:0,33,435	0/0:33,0:33:81.26:0,81,1091	0/0:20,0:20:57.19:0,57,779	0/0:20,0:20:57.19:0,57,780	0/0:20,0:20:57.19:0,57,779	0/0:10,0:10:27.09:0,27,369
chr10	83609484	.	A	AT	2044.30	PASS	AB=0.939;AC=22;AF=0.393;AN=56;BaseQRankSum=-0.048;DP=632;FS=4.853;HRun=13;HaplotypeScore=82.5680;InbreedingCoeff=0.5842;MQ=69.52;MQ0=4;MQRankSum=-0.957;QD=6.72;ReadPosRankSum=-1.015;VQSLOD=2.5277;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:35:38.44:197,38,0	0/0:9,1:10:1.91:0,2,157	0/0:27,0:17:11.23:0,11,45	0/0:15,0:11:1.07:0,1,26	0/0:32,0:32:55.62:0,56,524	0/0:15,1:16:7.79:0,8,196	1/1:5,0:14:31.21:156,31,0	1/1:10,16:27:9.35:346,9,0	0/1:18,1:20:15.04:15,0,191	0/0:25,0:25:53.45:0,53,369	0/0:19,1:20:22.67:0,23,300	0/1:23,1:24:7.89:8,0,234	0/0:20,1:21:7.44:0,7,204	0/1:14,1:15:4.19:4,0,119	0/0:18,0:18:41.61:0,42,285	0/0:16,0:17:27.08:0,27,253	0/0:28,1:29:31.16:0,31,351	0/0:24,0:24:58.92:0,59,400	1/1:17,6:25:12.12:227,12,0	1/1:8,16:25:14.54:292,15,0	1/1:8,2:30:42.81:230,43,0	0/0:30,0:31:54.48:0,54,361	0/0:17,0:19:26.09:0,26,238	0/1:34,2:38:8.25:8,0,363	0/0:21,0:22:49.54:0,50,333	1/1:7,17:24:47.97:431,48,0	1/1:6,17:22:2.32:295,2,0	1/1:1,2:3:3:28,3,0
chr10	83610020	.	GC	G	839.68	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.138;DP=615;FS=0.000;HRun=6;HaplotypeScore=70.9541;InbreedingCoeff=0.8978;MQ=76.09;MQ0=0;MQRankSum=-3.792;QD=19.53;ReadPosRankSum=0.654;VQSLOD=3.0890;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,41:43:87.21:934,87,0	0/0:13,0:13:36.08:0,36,453	0/0:12,0:12:18.02:0,18,194	0/0:12,0:12:6.05:0,6,178	0/0:24,0:24:69.21:0,69,891	0/0:29,0:29:78.24:0,78,1012	0/0:17,0:17:48.16:0,48,632	0/0:33,0:33:87.27:0,87,1124	0/0:27,0:27:81.25:0,81,1050	0/0:18,0:18:54.17:0,54,693	0/0:12,0:12:27.09:0,27,355	0/0:20,0:20:48.16:0,48,629	0/0:16,0:16:42.11:0,42,535	0/0:20,0:20:57.17:0,57,735	0/0:20,0:20:57.19:0,57,749	0/0:31,0:31:90.28:0,90,1170	0/0:17,0:17:51.17:0,51,671	0/0:21,0:21:57.15:0,57,716	0/0:26,0:26:75.22:0,75,958	0/0:23,0:23:66.21:0,66,867	0/0:27,0:27:75.18:0,75,936	0/0:14,0:14:39.13:0,39,513	0/0:20,0:20:51.17:0,51,670	0/0:21,0:21:51.11:0,51,636	0/0:11,0:11:33.11:0,33,434	0/0:37,0:37:99:0,105,1353	0/0:37,0:36:99:0,111,1457	0/0:14,0:14:42.11:0,42,523
chr10	83610312	.	CTTCAAATGCTTTTTTAAATA	C	708.48	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.844;DP=616;FS=16.778;HRun=0;HaplotypeScore=322.1740;InbreedingCoeff=0.9830;MQ=79.63;MQ0=1;MQRankSum=-3.776;QD=54.50;ReadPosRankSum=1.014;VQSLOD=1.8194;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,6:13:15.05:797,15,0	0/0:12,0:12:36.11:0,36,2845	0/0:18,0:18:42.12:0,42,1912	0/0:17,0:16:45.15:0,45,1957	0/0:25,0:25:72.25:0,72,5874	0/0:23,0:22:69.24:0,69,6619	0/0:13,0:13:39.13:0,39,3254	0/0:33,0:33:99:0,99,7936	0/0:17,0:17:51.18:0,51,4377	0/0:30,0:30:87.30:0,87,7336	0/0:16,0:16:48.16:0,48,3795	0/0:17,0:17:51.18:0,51,4463	0/0:27,0:27:78.27:0,78,5771	0/0:17,0:17:51.18:0,51,4086	0/0:28,0:28:78.27:0,78,5964	0/0:21,0:21:63.22:0,63,5043	0/0:21,0:20:60.18:0,60,4974	0/0:30,0:30:90.31:0,90,7096	0/0:26,0:26:75.73:0,76,5135	0/0:28,0:28:81.28:0,81,6737	0/0:11,0:10:30.10:0,30,2635	0/0:22,0:22:66.23:0,66,4751	0/0:28,0:28:84.29:0,84,6751	0/0:15,0:15:45.15:0,45,3949	0/0:25,0:25:75.26:0,75,6216	0/0:29,0:29:84.29:0,84,6812	0/0:43,0:42:99:0,126,10344	0/0:11,0:11:33.11:0,33,2496
chr10	83610596	.	T	TC	822.68	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.992;DP=682;FS=5.361;HRun=1;HaplotypeScore=107.8237;InbreedingCoeff=0.9687;MQ=79.59;MQ0=0;MQRankSum=-4.149;QD=25.71;ReadPosRankSum=-0.931;VQSLOD=3.1355;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,22:32:71.16:918,71,0	0/0:12,0:12:33.09:0,33,413	0/0:23,0:23:60.02:0,60,642	0/0:22,0:22:45.88:0,46,516	0/0:22,0:22:49.10:0,49,219	0/0:29,0:29:81.23:0,81,1021	0/0:25,0:25:58.71:0,59,226	0/0:30,0:30:77.43:0,77,916	0/0:20,0:20:60.20:0,60,778	0/0:35,0:35:99:0,102,1287	0/0:19,0:19:57.17:0,57,724	0/0:26,0:26:69.22:0,69,883	0/0:21,0:21:22.18:0,22,163	0/0:28,0:28:47.43:0,47,267	0/0:30,0:30:90.26:0,90,1128	0/0:18,0:18:54.15:0,54,673	0/0:31,0:31:90.19:0,90,1087	0/0:36,0:36:99:0,106,1263	0/0:21,0:21:63.17:0,63,779	0/0:24,0:24:72.22:0,72,908	0/0:16,0:16:48.14:0,48,602	0/0:21,0:21:48.72:0,49,214	0/0:21,0:21:60.18:0,60,764	0/0:23,0:23:68.86:0,69,838	0/0:23,0:23:12.52:0,13,154	0/0:34,0:34:32.88:0,33,273	0/0:30,0:30:87.19:0,87,1062	0/0:10,0:9:26.75:0,27,110
chr10	83611063	.	C	CTAGT	5125.11	PASS	AB=0.962;AC=16;AF=0.286;AN=56;BaseQRankSum=13.485;DP=538;FS=0.438;HRun=0;HaplotypeScore=169.8085;InbreedingCoeff=0.8089;MQ=91.75;MQ0=0;MQRankSum=-12.032;QD=45.76;ReadPosRankSum=4.283;VQSLOD=5.2819;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:16.14:484,16,0	0/0:12,0:12:36.12:0,36,753	0/0:32,0:32:86.43:0,86,1766	0/0:19,0:19:56.51:0,57,1028	1/1:10,1:11:15.05:382,15,0	0/0:18,0:18:54.19:0,54,1132	0/1:18,0:18:49.91:419,0,50	0/0:29,0:29:84.25:0,84,1552	0/0:21,0:21:63.21:0,63,1257	0/0:24,0:24:66.21:0,66,1297	0/0:13,0:13:36.11:0,36,704	0/0:23,0:23:69.21:0,69,1358	1/1:11,0:11:30.09:732,30,0	1/1:8,3:11:33.11:825,33,0	0/0:23,0:23:69.24:0,69,1433	0/0:17,0:17:51.15:0,51,983	0/0:28,0:28:84.26:0,84,1656	0/0:24,0:24:72.25:0,72,1488	0/0:14,0:14:39.10:0,39,707	0/0:11,0:11:33.10:0,33,653	0/0:42,0:42:99:0,120,2475	1/1:11,2:14:27.09:693,27,0	0/0:16,0:16:45.13:0,45,867	0/0:37,0:37:99:0,111,2150	1/1:14,1:15:33.07:757,33,0	0/1:11,1:12:32.83:626,0,33	0/0:23,0:23:69.21:0,69,1357	1/1:2,1:3:9.03:208,9,0
chr10	83611066	.	G	GTGAGAGACCCTCACCGCAAAGATAAGA	40203.10	PASS	AB=0.857;AC=17;AF=0.304;AN=56;BaseQRankSum=13.809;DP=635;FS=2.339;HRun=0;HaplotypeScore=447.1267;InbreedingCoeff=0.9055;MQ=84.35;MQ0=0;MQRankSum=-17.726;QD=192.36;ReadPosRankSum=3.549;VQSLOD=4.0064;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:30:69.22:5245,69,0	0/0:12,0:12:36.12:0,36,2188	0/0:32,0:32:87.28:0,87,4185	0/0:18,0:18:51.13:0,51,2278	1/1:17,1:18:33.11:2719,33,0	0/0:18,0:18:54.19:0,54,3439	1/1:23,0:26:63.20:4308,63,0	0/0:26,0:26:72.25:0,72,3160	0/0:23,0:23:66.23:0,66,3669	0/0:23,0:23:63.22:0,63,3668	0/0:12,0:12:30.10:0,30,2038	0/0:24,0:24:66.21:0,66,4076	1/1:25,0:25:72.18:6015,72,0	1/1:16,3:19:56.86:4487,57,0	0/0:26,0:26:72.23:0,72,4294	0/0:17,0:17:45.15:0,45,2958	0/0:28,0:28:81.28:0,81,4910	0/0:24,0:24:69.24:0,69,3936	0/0:13,0:13:36.12:0,36,1764	0/0:11,0:11:30.09:0,30,1553	0/0:44,0:44:99:0,129,6954	1/1:21,2:23:54.19:4114,54,0	0/0:14,0:14:42.14:0,42,2718	0/0:37,0:37:99:0,102,6124	1/1:30,1:31:69.22:5757,69,0	0/1:25,1:30:99:6845,0,121	0/0:24,0:24:66.23:0,66,4125	1/1:6,1:7:9.01:714,9,0
chr10	83611204	.	G	GC	1412.49	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.440;DP=671;FS=2.021;HRun=1;HaplotypeScore=93.1484;InbreedingCoeff=0.9951;MQ=80.13;MQ0=0;MQRankSum=-3.705;QD=30.05;ReadPosRankSum=0.383;VQSLOD=3.4157;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,43:47:99:1507,118,0	0/0:13,0:13:39.11:0,39,490	0/0:21,0:21:53.85:0,54,607	0/0:17,0:17:39.01:0,39,453	0/0:21,0:21:54.12:0,54,642	0/0:20,0:20:60.20:0,60,779	0/0:26,0:26:74.43:0,74,904	0/0:17,0:17:51.17:0,51,662	0/0:24,0:24:72.23:0,72,934	0/0:23,0:23:66.21:0,66,846	0/0:10,0:10:30.10:0,30,389	0/0:24,0:24:72.18:0,72,876	0/0:25,0:25:75.23:0,75,958	0/0:23,0:23:60.16:0,60,746	0/0:16,0:16:45.09:0,45,526	0/0:18,0:18:54.18:0,54,701	0/0:41,0:41:99:0,123,1593	0/0:27,0:27:81.26:0,81,1052	0/0:15,0:15:45.14:0,45,572	0/0:18,0:18:48.16:0,48,623	0/0:63,0:63:99:0,184,2352	0/0:21,0:21:60.18:0,60,757	0/0:11,0:11:33.08:0,33,399	0/0:42,0:42:99:0,126,1620	0/0:22,0:22:66.21:0,66,855	0/0:31,0:31:90.28:0,90,1151	0/0:28,0:28:84.27:0,84,1090	0/0:7,0:7:21.07:0,21,272
chr10	83613087	.	A	ATT	719.89	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.850;DP=658;FS=0.603;HRun=10;HaplotypeScore=132.9632;InbreedingCoeff=0.9829;MQ=74.68;MQ0=0;MQRankSum=-6.342;QD=13.33;ReadPosRankSum=-0.047;VQSLOD=1.4516;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:21.54:508,22,0	0/0:7,0:7:14.98:0,15,144	0/0:16,0:17:21.68:0,22,247	0/0:18,0:18:18.39:0,18,171	0/0:29,0:29:75.14:0,75,757	0/0:14,0:14:42.09:0,42,425	0/0:22,0:22:57.09:0,57,568	0/0:22,0:22:57.09:0,57,565	0/0:30,0:30:69.10:0,69,701	0/0:28,0:29:61.70:0,62,714	0/0:16,0:16:38.90:0,39,379	0/0:32,0:33:62.77:0,63,691	0/0:21,0:21:57.10:0,57,574	0/0:21,0:21:59.84:0,60,584	0/0:23,0:23:57.03:0,57,569	0/0:25,0:27:71.87:0,72,712	0/0:27,0:30:71.75:0,72,713	0/0:21,0:21:30.61:0,31,470	0/0:26,0:26:66.06:0,66,656	0/0:31,0:31:87.16:0,87,884	1/1:3,15:20:26.56:333,27,0	0/0:19,0:19:45.06:0,45,452	0/0:25,0:25:68.82:0,69,679	0/0:34,0:34:96.15:0,96,957	0/0:22,0:22:47.97:0,48,474	0/0:25,0:25:55.17:0,55,542	0/0:26,0:26:78.15:0,78,788	0/0:13,0:13:27.04:0,27,274
chr10	83613094	.	T	TG	175.99	PASS	AB=0.613;AC=1;AF=0.018;AN=56;BaseQRankSum=7.717;DP=656;FS=8.704;HRun=0;HaplotypeScore=121.2342;InbreedingCoeff=-0.0193;MQ=69.41;MQ0=0;MQRankSum=-5.604;QD=4.63;ReadPosRankSum=-1.313;VQSLOD=2.8014;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,24:38:81.74:250,0,82	0/0:7,0:7:21.05:0,21,262	0/0:20,0:17:37.15:0,37,417	0/0:15,0:15:31.42:0,31,315	0/0:30,0:30:29:0,29,294	0/0:16,0:16:48.13:0,48,632	0/0:22,0:22:34.11:0,34,224	0/0:20,0:19:52.54:0,53,213	0/0:28,0:28:81.23:0,81,1061	0/0:31,0:31:81.76:0,82,1115	0/0:16,0:16:45.12:0,45,592	0/0:31,0:31:81.46:0,81,1075	0/0:21,0:21:59.10:0,59,314	0/0:22,0:22:35.25:0,35,235	0/0:21,0:21:63.19:0,63,848	0/0:29,0:29:84.18:0,84,1087	0/0:28,0:28:78.01:0,78,1018	0/0:19,0:19:56.94:0,57,742	0/0:26,0:26:63.40:0,63,285	0/0:33,0:33:83.79:0,84,426	0/0:19,0:19:13.31:0,13,148	0/0:20,0:20:24.61:0,25,195	0/0:26,0:26:75.22:0,75,1017	0/0:38,0:38:99:0,114,1491	0/0:23,0:23:54.72:0,55,244	0/0:22,0:22:54.91:0,55,299	0/0:26,0:26:72.71:0,73,358	0/0:9,0:9:25.01:0,25,116
chr10	83613095	.	T	TTG	1148.41	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=3.100;DP=650;FS=5.190;HRun=0;HaplotypeScore=127.4363;InbreedingCoeff=0.3416;MQ=68.82;MQ0=0;MQRankSum=-6.375;QD=7.92;ReadPosRankSum=-4.614;VQSLOD=2.2260;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:9,24:37:76.65:1046,77,0	0/0:7,0:7:18.04:0,18,228	0/0:20,0:17:46.75:0,47,478	0/0:15,0:15:1.19:0,1,240	0/0:27,0:27:44.97:0,45,243	0/0:17,0:17:48.14:0,48,611	0/0:22,0:22:9.97:0,10,147	0/0:21,0:20:19.22:0,19,123	0/0:26,0:26:78.23:0,78,1041	0/0:31,0:31:89.64:0,90,1118	0/0:16,0:16:42.13:0,42,571	0/0:30,0:30:85.62:0,86,1067	0/0:21,0:21:8.29:0,8,190	0/0:22,0:22:34.08:0,34,203	0/0:21,0:21:63.18:0,63,851	0/0:29,0:29:84.17:0,84,1066	0/0:28,0:28:75.16:0,75,1013	0/0:19,0:19:55.02:0,55,711	0/1:26,0:26:32.39:32,0,136	0/0:33,0:33:43.21:0,43,287	1/1:19,0:19:9.40:95,9,0	0/1:19,0:19:24.74:25,0,117	0/0:27,0:27:78.23:0,78,1027	0/0:38,0:38:99:0,111,1465	0/1:22,0:22:67.34:67,0,93	0/1:22,0:22:26.24:26,0,179	0/0:26,0:26:69.24:0,69,298	0/0:9,0:9:23.84:0,24,93
chr10	83613301	.	AT	A	1181.47	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.818;DP=668;FS=20.439;HRun=10;HaplotypeScore=69.4394;InbreedingCoeff=0.8015;MQ=73.22;MQ0=0;MQRankSum=-0.854;QD=19.06;ReadPosRankSum=1.959;VQSLOD=2.6396;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,35:40:89.95:781,90,0	0/0:10,0:10:24.05:0,24,258	0/0:16,1:15:0.51:0,1,210	0/0:18,2:20:6.33:0,6,246	0/0:11,0:11:18.05:0,18,199	0/0:14,0:14:36.06:0,36,379	0/0:35,1:36:70.18:0,70,986	0/0:28,1:29:49.14:0,49,763	0/0:24,0:24:57.15:0,57,631	0/0:16,0:16:30.08:0,30,332	0/0:15,1:16:19.07:0,19,439	0/0:25,1:26:40.10:0,40,656	0/0:27,0:28:78.04:0,78,844	0/0:25,0:25:72.18:0,72,782	0/0:33,1:33:61.16:0,61,889	0/0:33,2:35:50.15:0,50,1001	1/1:0,22:22:59.97:521,60,0	0/0:17,1:18:22.07:0,22,472	0/0:25,1:26:30.42:0,30,550	0/0:26,2:28:43.07:0,43,676	0/0:33,0:33:93.17:0,93,978	0/0:13,0:13:33.09:0,33,365	0/0:15,1:16:17.26:0,17,388	0/0:40,3:43:59.01:0,59,1088	0/0:19,1:19:28.08:0,28,532	0/0:12,1:13:7.03:0,7,306	0/0:33,0:34:96.04:0,96,1007	0/0:20,0:20:54.10:0,54,577
chr10	83613819	.	C	CT	1678.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.292;DP=634;FS=2.103;HRun=0;HaplotypeScore=62.8215;InbreedingCoeff=0.9277;MQ=86.62;MQ0=0;MQRankSum=-5.721;QD=40.95;ReadPosRankSum=1.403;VQSLOD=4.3574;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:41:99:1774,111,0	0/0:6,0:6:18.02:0,18,229	0/0:21,0:21:54.18:0,54,740	0/0:29,0:28:27.70:0,28,739	0/0:16,0:16:48.16:0,48,670	0/0:19,0:19:54.14:0,54,732	0/0:28,0:27:84.26:0,84,1155	0/0:27,0:27:78.12:0,78,1021	0/0:27,0:27:81.26:0,81,1113	0/0:11,0:11:33.11:0,33,461	0/0:11,0:11:30.09:0,30,404	0/0:36,0:36:99:0,102,1420	0/0:22,0:22:66.22:0,66,907	0/0:26,0:26:69.19:0,69,940	0/0:24,0:24:69.20:0,69,942	0/0:20,0:20:57.15:0,57,774	0/0:36,0:36:99:0,105,1444	0/0:32,0:32:87.23:0,87,1176	0/0:14,0:14:42.10:0,42,564	0/0:17,0:17:51.16:0,51,696	0/0:66,0:66:99:0,193,2622	0/0:8,0:8:24.08:0,24,334	0/0:6,0:6:18.06:0,18,248	0/0:24,0:24:72.15:0,72,962	0/0:14,0:14:36.12:0,36,503	0/0:24,0:24:72.19:0,72,969	0/0:26,0:26:78.26:0,78,1081	0/0:3,0:3:9.03:0,9,126
chr10	83614343	.	GTGTA	G	807.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.857;DP=630;FS=2.010;HRun=0;HaplotypeScore=104.1639;InbreedingCoeff=0.9572;MQ=72.39;MQ0=0;MQRankSum=-4.825;QD=38.43;ReadPosRankSum=-1.455;VQSLOD=3.6788;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:48.16:902,48,0	0/0:8,0:8:21.07:0,21,563	0/0:16,0:16:27.08:0,27,601	0/0:14,0:13:11.31:0,11,580	0/0:20,0:20:60.19:0,60,1560	0/0:16,0:16:48.16:0,48,1295	0/0:40,0:40:99:0,120,3080	0/0:56,0:56:99:0,157,4103	0/0:23,0:23:60.19:0,60,1548	0/0:13,0:13:30.10:0,30,756	0/0:10,0:10:27.09:0,27,719	0/0:33,0:33:96.31:0,96,2514	0/0:27,0:27:75.26:0,75,2023	0/0:24,0:24:66.20:0,66,1664	0/0:37,0:37:99:0,105,2666	0/0:28,0:28:81.23:0,81,2004	0/0:33,0:33:96.33:0,96,2549	0/0:15,0:15:42.13:0,42,1077	0/0:23,0:23:63.18:0,63,1558	0/0:13,0:13:36.12:0,36,971	0/0:35,0:35:96.29:0,96,2472	0/0:16,0:16:45.14:0,45,1159	0/0:15,0:15:42.13:0,42,1077	0/0:15,0:15:45.12:0,45,1140	0/0:20,0:20:57.20:0,57,1524	0/0:19,0:19:48.16:0,48,1293	0/0:32,0:32:90.30:0,90,2339	0/0:8,0:8:24.08:0,24,641
chr10	83614855	.	G	GT	1723.54	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.461;DP=604;FS=4.861;HRun=0;HaplotypeScore=70.3223;InbreedingCoeff=0.9417;MQ=81.59;MQ0=0;MQRankSum=-5.282;QD=39.17;ReadPosRankSum=3.062;VQSLOD=4.3585;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,42:44:99:1818,123,0	0/0:4,0:4:12.04:0,12,168	0/0:24,0:23:66.14:0,66,838	0/0:17,0:17:44.45:0,44,572	0/0:20,0:20:57.19:0,57,794	0/0:16,0:16:48.16:0,48,665	0/0:27,0:27:78.21:0,78,1035	0/0:22,0:22:57.19:0,57,797	0/0:21,0:21:63.19:0,63,862	0/0:14,0:14:42.13:0,42,559	0/0:14,0:14:36.11:0,36,483	0/0:23,0:23:69.22:0,69,948	0/0:26,0:26:75.22:0,75,1013	0/0:19,0:19:51.16:0,51,696	0/0:24,0:24:72.22:0,72,974	0/0:23,0:23:69.20:0,69,917	0/0:26,0:26:78.26:0,78,1091	0/0:26,0:26:69.20:0,69,949	0/0:14,0:14:42.11:0,42,552	0/0:16,0:16:45.15:0,45,624	0/0:42,0:42:99:0,123,1667	0/0:14,0:14:39.13:0,39,543	0/0:13,0:13:36.11:0,36,482	0/0:42,0:42:99:0,123,1697	0/0:28,0:28:78.26:0,78,1088	0/0:28,0:28:84.01:0,84,1129	0/0:13,0:13:36.12:0,36,503	0/0:4,0:4:12.04:0,12,168
chr10	83614924	.	T	TC	858.13	PASS	AB=0.818;AC=20;AF=0.357;AN=56;BaseQRankSum=0.286;DP=399;FS=6.384;HRun=10;HaplotypeScore=61.6817;InbreedingCoeff=0.6730;MQ=71.61;MQ0=0;MQRankSum=-0.126;QD=5.65;ReadPosRankSum=-4.216;VQSLOD=0.2761;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:27:27.04:0,27,78	0/0:8,0:8:11.95:0,12,98	0/1:7,0:7:10.15:10,0,18	0/0:6,0:6:11.85:0,12,86	1/1:5,5:11:9:82,9,0	0/0:10,0:10:26.95:0,27,221	1/1:23,0:25:28.27:137,28,0	1/1:8,13:21:2.18:212,2,0	0/0:11,0:11:26.94:0,27,219	0/0:18,0:18:15.36:0,15,122	0/0:8,0:8:8.96:0,9,72	0/0:18,0:18:29.91:0,30,246	1/1:3,4:7:6.02:64,6,0	1/1:1,11:12:9.02:95,9,0	0/0:16,0:17:28.40:0,28,219	0/0:12,0:16:12.39:0,12,176	0/0:26,0:26:53.86:0,54,441	0/0:17,0:17:35.95:0,36,296	1/1:7,5:14:17.98:166,18,0	1/1:5,2:7:3.01:32,3,0	1/1:7,16:23:9.95:84,10,0	0/0:8,5:15:5.33:0,5,33	0/0:9,0:9:17.97:0,18,147	0/0:27,0:29:52.93:0,53,425	1/1:4,6:11:8.94:81,9,0	0/0:6,0:6:2.94:0,3,25	0/1:6,8:14:12.61:84,0,13	0/0:6,0:6:11.98:0,12,99
chr10	83614933	.	C	CCCCG	405.10	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=3.256;DP=412;FS=5.093;HRun=0;HaplotypeScore=106.7448;InbreedingCoeff=0.0872;MQ=70.52;MQ0=0;MQRankSum=0.007;QD=3.55;ReadPosRankSum=-4.402;VQSLOD=0.2318;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:59.99:0,60,584	0/0:9,0:9:14.02:0,14,228	0/1:7,0:7:35.16:35,0,58	0/0:6,0:6:10.29:0,10,142	0/1:13,0:13:35.15:35,0,46	0/0:11,0:11:30.07:0,30,487	1/1:5,1:27:29.50:359,29,0	0/1:21,0:21:36.63:37,0,174	0/0:13,0:13:27.06:0,27,437	0/0:20,0:20:32.85:0,33,378	0/0:7,0:7:12.01:0,12,180	0/0:16,0:16:33.07:0,33,564	0/0:6,0:6:5.60:0,6,26	0/0:20,0:20:11.26:0,11,102	0/0:19,0:19:36.94:0,37,525	0/0:15,0:15:40.84:0,41,534	0/0:27,0:27:57.08:0,57,952	0/0:19,0:19:45.08:0,45,690	0/1:12,0:12:37.76:38,0,38	0/0:4,0:4:5.79:0,6,38	0/1:20,0:20:34.58:35,0,71	0/0:17,0:17:7.98:0,8,86	0/0:12,0:12:26.93:0,27,374	0/0:30,0:30:60.13:0,60,959	0/0:10,0:10:8.49:0,8,44	0/0:7,0:7:8.94:0,9,104	0/1:14,0:14:2.45:2,0,99	0/0:8,0:8:14.99:0,15,222
chr10	83615270	.	CAG	C	2164.57	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.464;DP=624;FS=88.592;HRun=0;HaplotypeScore=82.1956;InbreedingCoeff=0.9974;MQ=85.17;MQ0=0;MQRankSum=-0.302;QD=35.48;ReadPosRankSum=2.424;VQSLOD=0.2312;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.30:0,96,1742	0/0:10,0:10:30.10:0,30,560	0/0:30,0:28:72.07:0,72,1234	0/0:30,1:29:69.50:0,70,1160	1/1:0,12:12:32.99:485,33,0	0/0:15,0:15:42.14:0,42,786	0/0:43,0:43:99:0,123,2218	0/0:28,0:28:81.28:0,81,1501	0/0:27,0:27:78.27:0,78,1430	0/0:21,0:21:63.20:0,63,1124	0/0:10,0:10:27.09:0,27,506	0/0:23,0:23:66.21:0,66,1202	1/1:1,9:10:21.07:309,21,0	1/1:0,15:15:45.15:662,45,0	0/0:39,0:39:99:0,108,1990	0/0:33,0:33:96.30:0,96,1732	0/0:36,0:36:99:0,105,1954	0/0:21,0:21:60.21:0,60,1111	0/0:16,0:16:48.16:0,48,864	0/0:13,0:13:39.13:0,39,730	0/0:50,0:50:99:0,138,2553	1/1:0,12:12:30.05:441,30,0	0/0:7,0:7:21.06:0,21,358	0/0:33,0:33:99:0,99,1844	1/1:0,12:12:30.10:442,30,0	0/0:14,0:14:42.13:0,42,722	0/0:16,0:16:48.16:0,48,898	0/0:12,0:12:36.12:0,36,656
chr10	83615424	.	GGGC	G	932.91	PASS	AB=0.985;AC=24;AF=0.462;AN=52;BaseQRankSum=1.557;DP=228;FS=26.299;HRun=0;HaplotypeScore=50.8936;InbreedingCoeff=0.6160;MQ=92.24;MQ0=6;MQRankSum=0.451;QD=7.29;ReadPosRankSum=-3.139;VQSLOD=-0.0136;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:11.60:164,12,0	0/0:1,0:1:0:0,0,0	0/1:28,0:14:0.20:0,0,247	0/0:26,0:22:8.65:0,9,226	1/1:2,0:2:5.99:50,6,0	0/0:7,0:7:12:0,12,121	0/1:30,1:32:27.61:212,0,28	1/1:3,0:3:8.99:77,9,0	0/0:3,0:3:6.02:0,6,78	0/0:4,0:4:9.47:0,9,81	./.	0/0:10,0:10:2.35:0,2,203	0/0:1,0:1:0.47:0,0,1	./.	0/0:11,0:11:7.88:0,8,254	0/0:10,0:10:26.78:0,27,305	0/0:11,0:11:27.14:0,27,252	0/0:3,0:3:8.92:0,9,69	1/1:6,0:6:17.96:146,18,0	1/1:7,0:7:7.88:67,8,0	1/1:4,0:4:6:52,6,0	1/1:2,0:2:6:52,6,0	0/0:5,0:5:6.88:0,7,50	0/0:8,0:8:24.02:0,24,278	1/1:6,0:6:8.86:75,9,0	1/1:8,0:8:17.72:140,18,0	1/1:1,4:5:2.92:17,3,0	1/1:4,0:4:8.52:57,9,0
chr10	83615425	.	GGC	G	1205.22	PASS	AB=1.000;AC=25;AF=0.463;AN=54;BaseQRankSum=2.425;DP=234;FS=10.561;HRun=0;HaplotypeScore=45.7957;InbreedingCoeff=0.6774;MQ=94.49;MQ0=6;MQRankSum=0.729;QD=9.27;ReadPosRankSum=-1.872;VQSLOD=1.4933;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:25.76:207,26,0	0/0:2,0:2:3:0,3,25	0/1:28,0:14:17.31:17,0,211	0/0:26,0:22:0:0,0,179	1/1:2,0:2:5.99:51,6,0	0/0:7,0:7:12:0,12,120	1/1:31,1:32:44.54:364,45,0	1/1:3,0:3:8.99:77,9,0	0/0:3,0:3:8.99:0,9,75	0/0:4,0:4:9.47:0,9,80	0/0:1,0:1:3:0,3,25	0/0:12,0:12:23.77:0,24,224	0/0:1,0:1:0.47:0,0,1	./.	0/0:12,0:12:32.31:0,32,270	0/0:10,0:10:22.38:0,22,242	0/0:11,0:11:27.81:0,28,244	0/0:3,0:3:8.92:0,9,69	1/1:7,0:7:20.96:173,21,0	1/1:8,0:8:16.67:109,17,0	1/1:4,0:4:6:52,6,0	1/1:2,0:2:6:52,6,0	0/0:4,0:4:6.88:0,7,50	0/0:8,0:8:24.01:0,24,230	1/1:6,0:6:8.72:75,9,0	1/1:0,8:8:17.94:140,18,0	1/1:5,0:5:2.92:17,3,0	1/1:4,0:4:9.74:61,10,0
chr10	83615486	.	C	CCA	605.95	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.872;DP=386;FS=8.020;HRun=0;HaplotypeScore=56.1747;InbreedingCoeff=0.8535;MQ=87.80;MQ0=0;MQRankSum=-2.162;QD=24.24;ReadPosRankSum=2.329;VQSLOD=3.8588;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:42.14:701,42,0	0/0:6,0:6:18.06:0,18,229	0/0:18,0:18:29.30:0,29,339	0/0:26,0:25:41.42:0,41,464	0/0:9,0:9:27.09:0,27,343	0/0:11,0:11:33.11:0,33,420	0/0:24,0:24:60.18:0,60,739	0/0:13,0:13:18.04:0,18,206	0/0:10,0:10:30.10:0,30,381	0/0:10,0:10:30.06:0,30,364	0/0:4,0:4:6.02:0,6,76	0/0:19,0:19:51.15:0,51,636	0/0:7,0:7:21.07:0,21,267	0/0:9,0:9:27.08:0,27,331	0/0:19,0:19:51.15:0,51,635	0/0:8,0:8:21.05:0,21,254	0/0:21,0:21:63.17:0,63,773	0/0:20,0:20:57.15:0,57,696	0/0:14,0:14:33.10:0,33,420	0/0:9,0:9:27.09:0,27,343	0/0:28,0:28:80.57:0,81,981	0/0:11,0:11:33.11:0,33,420	0/0:10,0:10:30.07:0,30,356	0/0:17,0:17:48.12:0,48,572	0/0:9,0:9:27.09:0,27,344	0/0:17,0:17:45.05:0,45,539	0/0:8,0:8:21.05:0,21,252	0/0:4,0:4:12.04:0,12,153
chr10	83618238	.	C	CAGGGAGTAGA	575.45	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.001;DP=623;FS=2.609;HRun=0;HaplotypeScore=191.5482;InbreedingCoeff=0.9337;MQ=77.73;MQ0=0;MQRankSum=-4.210;QD=35.97;ReadPosRankSum=-3.194;VQSLOD=2.8403;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,4371	0/0:13,0:13:39.08:0,39,1037	0/0:25,0:25:62.94:0,63,1565	0/0:15,0:15:8.22:0,8,854	0/0:21,0:21:63.20:0,63,1931	0/0:16,0:16:48.16:0,48,1434	1/1:8,4:16:24.80:669,25,0	0/0:25,0:25:75.25:0,75,2183	0/0:20,0:20:57.17:0,57,1831	0/0:22,0:22:66.12:0,66,2105	0/0:20,0:20:57.20:0,57,1972	0/0:26,0:26:75.26:0,75,2361	0/0:12,0:12:33.10:0,33,974	0/0:22,0:22:63.22:0,63,1903	0/0:21,0:21:63.20:0,63,1918	0/0:23,0:23:66.23:0,66,2186	0/0:35,0:35:99:0,105,3368	0/0:18,0:18:54.18:0,54,1677	0/0:22,0:22:57.18:0,57,1775	0/0:27,0:27:78.21:0,78,2385	0/0:31,0:31:90.29:0,90,2668	0/0:32,0:32:86.33:0,86,2694	0/0:24,0:24:69.23:0,69,2194	0/0:10,0:10:30.07:0,30,952	0/0:16,0:16:48.16:0,48,1617	0/0:20,0:20:57.15:0,57,1729	0/0:25,0:25:72.25:0,72,2256	0/0:20,0:20:60.21:0,60,2095
chr10	83618239	.	C	CAGGG	609.31	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.049;DP=625;FS=0.949;HRun=0;HaplotypeScore=110.6428;InbreedingCoeff=0.9549;MQ=76.39;MQ0=0;MQRankSum=-4.771;QD=33.85;ReadPosRankSum=-3.893;VQSLOD=3.0577;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,2700	0/0:12,0:12:36.12:0,36,722	0/0:23,0:23:60.13:0,60,1062	0/0:14,0:14:37.18:0,37,623	0/0:22,0:22:63.22:0,63,1286	0/0:16,0:16:48.16:0,48,978	1/1:10,4:18:29.69:704,30,0	0/0:25,0:25:72.25:0,72,1509	0/0:20,0:20:54.19:0,54,1119	0/0:22,0:22:66.19:0,66,1339	0/0:20,0:20:57.20:0,57,1195	0/0:26,0:26:75.26:0,75,1555	0/0:12,0:12:33.11:0,33,655	0/0:22,0:22:66.21:0,66,1327	0/0:20,0:20:60.21:0,60,1238	0/0:23,0:23:69.23:0,69,1410	0/0:34,0:34:99:0,99,2058	0/0:19,0:19:54.18:0,54,1066	0/0:22,0:22:36.23:0,36,1162	0/0:26,0:26:72.16:0,72,1423	0/0:34,0:34:93.30:0,93,1899	0/0:33,0:33:93.29:0,93,1835	0/0:24,0:24:69.19:0,69,1403	0/0:10,0:10:10.13:0,10,546	0/0:16,0:16:48.16:0,48,1005	0/0:20,0:20:56.85:0,57,1139	0/0:25,0:25:72.24:0,72,1458	0/0:20,0:20:60.21:0,60,1257
chr10	83618580	.	G	GA	1152.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.445;DP=617;FS=4.153;HRun=7;HaplotypeScore=66.6617;InbreedingCoeff=0.9943;MQ=86.85;MQ0=0;MQRankSum=-5.120;QD=26.18;ReadPosRankSum=0.852;VQSLOD=4.4495;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,40:44:87.34:1247,87,0	0/0:8,0:8:21.03:0,21,203	0/0:22,0:22:50.22:0,50,439	0/0:19,0:19:38.56:0,39,337	0/0:28,0:28:75.12:0,75,724	0/0:27,0:27:69.11:0,69,666	0/0:28,0:28:81.11:0,81,776	0/0:18,0:18:48.07:0,48,464	0/0:14,0:14:27.04:0,27,261	0/0:19,0:19:51.08:0,51,492	0/0:23,0:23:60.10:0,60,579	0/0:26,0:26:69.08:0,69,655	0/0:31,0:31:90.12:0,90,862	0/0:20,0:20:54.09:0,54,521	0/0:20,0:20:54.08:0,54,522	0/0:28,0:28:69.09:0,69,661	0/0:19,0:19:48.07:0,48,464	0/0:22,0:22:63.06:0,63,594	0/0:25,0:25:69.09:0,69,660	0/0:18,0:18:48.08:0,48,464	0/0:22,0:22:51.08:0,51,493	0/0:21,0:21:51.08:0,51,492	0/0:16,0:16:45.07:0,45,435	0/0:20,0:20:51.06:0,51,487	0/0:25,0:25:66.10:0,66,637	0/0:24,0:24:69.11:0,69,666	0/0:20,0:20:54.06:0,54,510	0/0:10,0:10:30.05:0,30,290
chr10	83618950	.	CTCT	C	925.59	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.477;DP=655;FS=0.000;HRun=0;HaplotypeScore=107.2600;InbreedingCoeff=0.9967;MQ=67.77;MQ0=5;MQRankSum=-1.083;QD=31.92;ReadPosRankSum=1.145;VQSLOD=3.6453;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:66.22:1020,66,0	0/0:12,0:12:33.09:0,33,602	0/0:41,0:28:52.74:0,53,755	0/0:35,0:20:24.37:0,24,545	0/0:28,0:28:65.97:0,66,597	0/0:24,0:24:72.25:0,72,1487	0/0:30,0:30:68.99:0,69,616	0/0:36,0:36:97.70:0,98,1597	0/0:10,0:10:30.06:0,30,500	0/0:28,0:28:63.19:0,63,1180	0/0:19,0:19:48.13:0,48,912	0/0:24,0:24:72.18:0,72,1313	0/0:13,0:13:29.95:0,30,270	0/0:18,0:18:41.93:0,42,353	0/0:24,0:24:69.16:0,69,1268	0/0:26,0:26:69.18:0,69,1238	0/0:32,0:31:90.28:0,90,1731	0/0:16,0:16:45.05:0,45,777	0/0:17,0:17:48.08:0,48,737	0/0:17,0:17:45.14:0,45,834	0/0:21,0:21:45.15:0,45,874	0/0:20,0:20:56.90:0,57,476	0/0:23,0:23:66.22:0,66,1325	0/0:14,0:14:42.13:0,42,821	0/0:19,0:19:51:0,51,463	0/0:30,0:30:78.02:0,78,750	0/0:22,0:21:54.07:0,54,904	0/0:26,0:26:59.33:0,59,500
chr10	83618958	.	CT	C	3116.96	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=9.833;DP=671;FS=4.492;HRun=10;HaplotypeScore=79.5449;InbreedingCoeff=0.9678;MQ=70.04;MQ0=6;MQRankSum=-0.951;QD=17.22;ReadPosRankSum=4.317;VQSLOD=4.2966;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:2.55:0,3,139	0/0:11,0:11:26.44:0,26,274	0/0:45,1:27:49.57:0,50,491	0/0:40,1:27:34.99:0,35,320	1/1:4,19:23:23.82:435,24,0	0/0:31,0:31:93.21:0,93,999	1/1:5,25:30:65:552,65,0	0/0:39,0:39:60.66:0,61,875	0/0:11,0:11:24.05:0,24,257	0/0:22,0:22:57.12:0,57,603	0/0:17,0:17:45.11:0,45,489	0/0:25,1:26:43.13:0,43,704	1/1:3,14:17:23.98:208,24,0	1/1:1,18:19:41.91:364,42,0	0/0:27,0:27:65.62:0,66,693	0/0:24,0:24:40.12:0,40,663	0/0:33,1:33:64.06:0,64,908	0/0:17,0:17:42.09:0,42,453	0/0:17,0:18:41.95:0,42,442	0/0:17,0:17:40.75:0,41,455	0/0:15,0:15:44.14:0,44,269	1/1:3,19:22:50.98:442,51,0	0/0:26,0:27:78.04:0,78,843	0/0:15,0:15:42.09:0,42,455	1/1:1,18:19:50.98:443,51,0	1/1:6,23:29:32.77:513,33,0	0/0:18,0:17:45.12:0,45,498	1/1:4,18:22:41.99:365,42,0
chr10	83619627	.	TC	T	1306.21	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.439;DP=586;FS=22.350;HRun=2;HaplotypeScore=69.7605;InbreedingCoeff=0.9931;MQ=85.97;MQ0=0;MQRankSum=-1.168;QD=35.30;ReadPosRankSum=-0.768;VQSLOD=1.6011;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,2019	0/0:7,0:7:21.07:0,21,315	0/0:18,0:17:48.16:0,48,697	0/0:24,0:24:63.64:0,64,893	0/0:18,0:18:51.17:0,51,764	0/0:23,0:23:69.22:0,69,1014	0/0:21,0:21:60.19:0,60,879	0/0:31,0:31:84.27:0,84,1223	0/0:17,0:17:51.17:0,51,764	0/0:14,0:14:42.13:0,42,612	0/0:17,0:17:45.14:0,45,653	0/0:23,0:23:69.23:0,69,1033	0/0:14,0:14:42.14:0,42,621	0/0:15,0:15:45.15:0,45,674	0/0:22,0:22:66.21:0,66,967	0/0:15,0:15:45.13:0,45,635	0/0:27,0:27:81.24:0,81,1172	0/0:27,0:27:72.22:0,72,1047	0/0:11,0:11:30.10:0,30,450	0/0:12,0:11:30.10:0,30,449	0/0:30,0:30:90.29:0,90,1329	0/0:23,0:23:69.21:0,69,996	0/0:13,0:13:36.11:0,36,520	0/0:22,0:22:66.22:0,66,988	0/0:28,0:28:84.27:0,84,1239	1/1:0,31:31:93.29:1192,93,0	0/0:28,0:28:84.27:0,84,1226	1/1:0,6:6:18.06:234,18,0
chr10	83619750	.	A	AT	787.59	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.024;DP=548;FS=0.776;HRun=6;HaplotypeScore=51.6320;InbreedingCoeff=0.9542;MQ=79.31;MQ0=0;MQRankSum=-4.276;QD=23.87;ReadPosRankSum=0.695;VQSLOD=2.8686;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:33:72.20:882,72,0	0/0:5,0:5:11.97:0,12,101	0/0:15,0:15:32.93:0,33,299	0/0:22,0:22:40.20:0,40,360	0/0:26,0:26:74.17:0,74,730	0/0:24,0:24:72.16:0,72,734	0/0:19,0:19:57.10:0,57,567	0/0:33,0:33:46.85:0,47,779	0/0:20,0:20:60.14:0,60,612	0/0:21,0:21:57.13:0,57,581	0/0:11,0:11:33.07:0,33,331	0/0:19,0:19:57.10:0,57,567	0/0:17,0:17:42.04:0,42,406	0/0:18,0:18:54.12:0,54,551	0/0:17,0:17:51.10:0,51,513	0/0:21,0:21:60.11:0,60,601	0/0:28,0:28:78.10:0,78,766	0/0:18,0:18:48.07:0,48,475	0/0:19,0:19:51.10:0,51,514	0/0:18,0:18:51.10:0,51,512	0/0:22,0:22:60.12:0,60,606	0/0:8,0:8:18.04:0,18,184	0/0:18,0:18:45.09:0,45,458	0/0:24,0:24:60.10:0,60,598	0/0:17,0:17:51.12:0,51,520	0/0:34,0:34:93.17:0,93,929	0/0:15,0:15:36.08:0,36,367	0/0:6,0:6:18.04:0,18,184
chr10	83619868	.	C	CAGGG	1717.88	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.535;DP=525;FS=0.000;HRun=0;HaplotypeScore=86.5792;InbreedingCoeff=0.9727;MQ=74.17;MQ0=0;MQRankSum=-2.692;QD=74.69;ReadPosRankSum=0.677;VQSLOD=5.4412;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,1853	0/0:8,0:8:18.06:0,18,336	0/0:8,0:8:12.06:0,12,258	0/0:12,0:12:21.07:0,21,374	0/0:17,0:17:48.16:0,48,881	0/0:12,0:12:30.09:0,30,529	0/0:26,0:26:78.25:0,78,1419	0/0:30,0:30:69.24:0,69,1278	0/0:15,0:15:42.14:0,42,783	0/0:9,0:9:24.08:0,24,421	0/0:14,0:14:39.13:0,39,728	0/0:24,0:24:63.22:0,63,1176	0/0:18,0:18:54.19:0,54,999	0/0:15,0:15:45.15:0,45,840	0/0:26,0:26:78.27:0,78,1450	0/0:22,0:22:63.22:0,63,1149	0/0:33,0:33:87.30:0,87,1624	0/0:25,0:25:72.25:0,72,1337	0/0:25,0:25:69.22:0,69,1191	0/0:13,0:13:39.13:0,39,728	0/0:33,0:33:90.31:0,90,1680	0/0:13,0:13:36.12:0,36,647	0/0:11,0:11:33.10:0,33,577	0/0:23,0:23:66.21:0,66,1183	0/0:15,0:15:45.15:0,45,840	1/1:0,17:17:51.18:1358,51,0	0/0:18,0:18:48.16:0,48,882	1/1:0,6:6:18.06:480,18,0
chr10	83620224	.	AC	A	2058.31	PASS	AB=0.917;AC=13;AF=0.232;AN=56;BaseQRankSum=5.770;DP=531;FS=0.452;HRun=9;HaplotypeScore=62.9816;InbreedingCoeff=0.9182;MQ=76.92;MQ0=1;MQRankSum=-0.644;QD=17.30;ReadPosRankSum=1.032;VQSLOD=3.7435;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:23:28.56:0,29,153	0/0:8,0:8:15.04:0,15,165	0/0:16,0:16:41.89:0,42,448	0/0:12,0:11:20.75:0,21,183	1/1:4,13:17:44.98:404,45,0	0/0:15,0:15:30.09:0,30,346	1/1:2,31:34:86.08:774,86,0	0/0:19,0:19:30.08:0,30,338	0/0:18,0:18:42.12:0,42,485	0/0:17,0:17:32.99:0,33,344	0/0:13,0:13:21.50:0,22,230	0/0:30,0:30:84.24:0,84,959	1/1:2,12:14:30.01:274,30,0	1/1:1,20:21:42.02:384,42,0	0/0:31,0:31:84.24:0,84,960	0/0:21,0:21:54.16:0,54,623	0/0:32,0:32:87.22:0,87,989	0/0:23,0:23:63.19:0,63,726	0/0:20,0:20:33.08:0,33,372	0/0:7,0:7:12.51:0,13,139	0/0:12,0:31:37.31:0,37,210	1/1:3,8:11:21.91:216,22,0	0/0:10,0:10:30.08:0,30,335	0/0:28,0:28:69.19:0,69,784	1/1:5,6:11:20.98:189,21,0	0/0:16,0:16:34.33:0,34,375	0/0:21,0:21:54.15:0,54,612	0/1:10,1:11:3.40:3,0,216
chr10	83620340	.	GGC	G	33.07	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.368;DP=579;FS=1.516;HRun=0;HaplotypeScore=83.9107;InbreedingCoeff=0.9003;MQ=76.36;MQ0=0;MQRankSum=-0.731;QD=1.44;ReadPosRankSum=-2.691;VQSLOD=1.1135;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,18:23:9.28:116,9,0	0/0:11,0:11:33.11:0,33,531	0/0:12,0:13:35.78:0,36,479	0/0:20,0:19:49.92:0,50,618	0/0:20,0:20:34.60:0,35,153	0/0:20,0:20:57.07:0,57,827	0/0:30,0:30:69.82:0,70,337	0/0:13,0:13:33.06:0,33,498	0/0:9,0:9:23.99:0,24,384	0/0:20,0:20:51.13:0,51,773	0/0:9,0:9:27.06:0,27,406	0/0:34,0:34:95.24:0,95,1460	0/0:26,0:26:50.75:0,51,237	0/0:27,0:27:65.40:0,65,276	0/0:26,0:26:75.20:0,75,1185	0/0:29,0:29:84.17:0,84,1295	0/0:36,0:36:99:0,104,1475	0/0:29,0:29:87.06:0,87,1346	0/0:19,0:19:56.77:0,57,730	0/0:15,0:15:44.85:0,45,640	0/0:22,0:22:62.90:0,63,573	0/0:17,0:17:41.12:0,41,161	0/0:15,0:15:39.08:0,39,582	0/0:31,0:31:93.14:0,93,1369	0/0:22,0:22:46.73:0,47,189	0/0:17,0:17:35.71:0,36,140	0/0:22,0:21:66.14:0,66,1013	0/0:4,0:4:10.80:0,11,67
chr10	83620342	.	CG	C	3837.41	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=9.203;DP=589;FS=4.429;HRun=8;HaplotypeScore=60.9203;InbreedingCoeff=0.9289;MQ=76.83;MQ0=0;MQRankSum=-2.417;QD=20.86;ReadPosRankSum=2.636;VQSLOD=3.9724;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:4.28:4,0,16	0/0:12,0:12:36.10:0,36,423	0/0:13,0:13:32.76:0,33,365	0/0:21,0:20:41.70:0,42,452	1/1:1,19:20:60.09:578,60,0	0/0:21,0:21:51.12:0,51,581	1/1:5,25:30:60.09:579,60,0	0/0:14,0:14:36.07:0,36,392	0/0:11,0:11:30.08:0,30,351	0/0:20,0:20:51.14:0,51,597	0/0:10,0:10:24.07:0,24,290	0/0:33,0:33:90.75:0,91,1088	1/1:3,21:24:60.09:578,60,0	1/1:4,23:27:69.06:651,69,0	0/0:26,0:26:72.22:0,72,869	0/0:29,0:29:81.25:0,81,977	0/0:35,1:36:61.31:0,61,1021	0/0:30,0:30:81.25:0,81,979	0/0:19,0:19:48.13:0,48,567	0/0:18,0:18:51.11:0,51,573	0/0:7,0:25:49.11:0,49,292	1/1:3,14:17:42.07:405,42,0	0/0:16,0:16:36.11:0,36,427	0/0:29,0:29:78.23:0,78,930	1/1:3,19:22:51.08:492,51,0	1/1:0,16:16:48.08:463,48,0	0/0:22,0:21:66.19:0,66,784	1/1:1,3:4:9.01:87,9,0
chr10	83620350	.	GT	G	743.28	PASS	AB=0.956;AC=12;AF=0.214;AN=56;BaseQRankSum=14.153;DP=587;FS=12.040;HRun=1;HaplotypeScore=71.2218;InbreedingCoeff=0.5915;MQ=75.44;MQ0=0;MQRankSum=-1.812;QD=4.70;ReadPosRankSum=4.530;VQSLOD=-0.6572;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,1:24:26.80:0,27,214	0/0:13,0:13:36.03:0,36,466	0/0:12,0:12:31.91:0,32,420	0/0:18,0:17:34.39:0,34,508	0/1:23,1:24:43.01:144,0,43	0/0:16,0:16:48.13:0,48,646	1/1:25,0:25:35.65:102,36,0	0/0:17,0:17:48.08:0,48,585	0/0:13,0:13:36.08:0,36,466	0/0:24,0:24:66.61:0,67,852	0/0:13,0:13:35.94:0,36,429	0/0:32,0:32:92.97:0,93,1296	1/1:21,0:21:44.71:171,45,0	1/1:24,2:26:42.81:231,43,0	0/0:26,0:26:78.17:0,78,1025	0/0:28,0:28:84.27:0,84,1179	0/0:33,0:33:93.10:0,93,1292	0/0:31,0:31:93.21:0,93,1237	0/0:20,0:20:59.96:0,60,777	0/0:18,0:18:51.13:0,51,685	0/0:23,0:23:59.11:0,59,426	0/1:16,1:17:5.46:102,0,5	0/0:18,0:18:51.52:0,52,588	0/0:27,0:27:81.19:0,81,1092	0/1:21,2:23:10.25:115,0,10	0/1:19,0:19:29.14:29,0,31	0/0:23,0:22:69.22:0,69,959	1/1:3,0:3:6.45:21,6,0
chr10	83620908	.	AG	A	2297.16	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.863;DP=545;FS=0.884;HRun=9;HaplotypeScore=57.7892;InbreedingCoeff=0.9738;MQ=73.11;MQ0=0;MQRankSum=-2.345;QD=19.14;ReadPosRankSum=-0.727;VQSLOD=3.5060;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,32:38:90.04:820,90,0	0/0:2,0:2:6.01:0,6,59	0/0:10,0:11:24.05:0,24,255	0/0:21,0:21:34.80:0,35,289	0/0:21,0:21:51.15:0,51,587	0/0:18,0:18:45.11:0,45,507	0/0:26,0:26:60.15:0,60,670	1/1:6,17:23:44.99:404,45,0	0/0:22,0:22:58.97:0,59,653	0/0:22,0:22:48.14:0,48,554	0/0:13,0:13:39.10:0,39,439	0/0:22,0:22:63.19:0,63,727	0/0:16,0:16:45.12:0,45,508	0/0:16,0:16:39.11:0,39,446	0/0:17,1:18:20.68:0,21,491	0/0:17,0:17:42.11:0,42,475	0/0:31,0:31:84.22:0,84,948	0/0:19,0:19:30.17:0,30,503	1/1:4,12:16:32.98:296,33,0	1/1:5,17:22:50.96:457,51,0	0/0:18,0:18:45.12:0,45,509	0/0:11,0:11:27.07:0,27,302	0/0:19,0:19:51.14:0,51,578	0/0:29,0:29:81.24:0,81,935	0/0:19,0:19:48.14:0,48,554	0/0:23,0:23:60.17:0,60,685	1/1:3,18:20:54.02:494,54,0	0/0:11,0:11:27.06:0,27,300
chr10	83622720	.	CCA	C	1956.89	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.640;DP=638;FS=0.000;HRun=0;HaplotypeScore=78.6952;InbreedingCoeff=0.8909;MQ=88.45;MQ0=0;MQRankSum=-5.898;QD=40.77;ReadPosRankSum=1.351;VQSLOD=5.5680;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,48:48:99:2052,126,0	0/0:3,0:3:6.02:0,6,107	0/0:28,0:28:81.22:0,81,1503	0/0:22,0:22:60.13:0,60,1075	0/0:17,0:17:51.16:0,51,999	0/0:15,0:15:45.15:0,45,914	0/0:32,0:32:96.33:0,96,1941	0/0:25,0:25:75.25:0,75,1486	0/0:18,0:18:54.17:0,54,1045	0/0:24,0:24:69.24:0,69,1392	0/0:11,0:11:33.11:0,33,659	0/0:29,0:29:87.28:0,87,1707	0/0:20,0:20:60.21:0,60,1219	0/0:21,0:21:63.19:0,63,1208	0/0:29,0:29:87.30:0,87,1741	0/0:27,0:27:81.27:0,81,1601	0/0:47,0:47:99:0,141,2752	0/0:27,0:27:81.26:0,81,1606	0/0:20,0:20:60.16:0,60,1109	0/0:10,0:10:30.08:0,30,538	0/0:44,0:44:99:0,132,2521	0/0:14,0:14:42.13:0,42,817	0/0:9,0:9:27.09:0,27,545	0/0:28,0:28:84.29:0,84,1705	0/0:13,0:13:39.12:0,39,754	0/0:25,0:25:75.24:0,75,1450	0/0:27,0:26:81.27:0,81,1609	0/0:5,0:5:15.03:0,15,268
chr10	83623957	.	GA	G	5532.80	PASS	AB=0.537;AC=15;AF=0.268;AN=56;BaseQRankSum=13.866;DP=693;FS=8.663;HRun=3;HaplotypeScore=72.5110;InbreedingCoeff=0.9093;MQ=87.42;MQ0=0;MQRankSum=-3.230;QD=31.08;ReadPosRankSum=4.117;VQSLOD=4.7660;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,1788	0/0:13,0:13:39.12:0,39,531	0/0:31,0:32:31.48:0,31,755	0/0:20,0:20:48.13:0,48,557	1/1:0,22:22:66.12:781,66,0	0/0:27,0:27:78.24:0,78,1080	1/1:2,24:26:51.16:631,51,0	0/0:38,0:38:99:0,108,1485	0/0:26,0:26:78.24:0,78,1096	0/0:24,0:24:66.22:0,66,944	0/0:18,0:18:48.15:0,48,665	0/0:27,0:27:81.24:0,81,1104	1/1:1,17:18:48.15:594,48,0	1/1:1,25:26:63.20:780,63,0	0/0:35,0:35:99:0,102,1391	0/0:23,0:23:69.22:0,69,971	0/0:21,0:21:63.20:0,63,884	0/0:23,0:23:66.20:0,66,918	0/0:18,0:18:54.17:0,54,742	0/0:23,0:23:69.23:0,69,984	0/0:35,0:35:99:0,99,1360	1/1:0,21:22:54.17:669,54,0	0/0:19,0:19:57.19:0,57,811	0/0:31,1:32:53.15:0,53,1169	1/1:0,29:29:84.26:1040,84,0	0/1:3,19:22:22.76:630,0,23	0/0:18,0:18:54.18:0,54,767	1/1:0,13:13:33.10:408,33,0
chr10	83624503	.	CT	C	4501.28	PASS	AB=0.952;AC=19;AF=0.339;AN=56;BaseQRankSum=13.683;DP=589;FS=4.015;HRun=8;HaplotypeScore=72.4824;InbreedingCoeff=0.9572;MQ=78.56;MQ0=2;MQRankSum=-5.354;QD=22.39;ReadPosRankSum=-0.786;VQSLOD=5.0139;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,49:52:99:1304,135,0	0/0:9,0:9:27.06:0,27,303	0/1:19,1:19:0.32:0,0,332	0/0:23,0:22:48.29:0,48,548	1/1:3,12:15:33.05:318,33,0	0/0:27,0:27:81.19:0,81,938	1/1:5,17:22:54.07:521,54,0	0/0:19,0:19:45.13:0,45,532	0/0:16,0:16:48.14:0,48,569	0/0:22,0:22:57.17:0,57,689	0/0:17,0:17:45.14:0,45,543	0/0:19,0:19:57.17:0,57,689	1/1:5,10:15:42.07:405,42,0	1/1:0,13:13:39.06:376,39,0	0/0:25,0:25:72.22:0,72,870	0/0:18,0:18:51.16:0,51,616	0/0:30,0:30:87.27:0,87,1050	0/0:18,0:18:48.13:0,48,568	0/0:22,0:22:60.18:0,60,724	0/0:18,0:18:45.14:0,45,544	0/0:24,1:25:40.22:0,40,757	1/1:3,13:16:45.06:428,45,0	0/0:19,1:20:22.17:0,22,541	0/0:34,0:34:93.27:0,93,1112	1/1:0,12:12:36.06:348,36,0	1/1:5,19:25:28.89:549,29,0	0/0:26,0:25:66.20:0,66,796	1/1:3,8:11:27.02:254,27,0
chr10	83624547	.	AC	A	4438.03	PASS	AB=0.900;AC=17;AF=0.304;AN=56;BaseQRankSum=14.727;DP=617;FS=0.000;HRun=4;HaplotypeScore=79.5746;InbreedingCoeff=0.9150;MQ=80.16;MQ0=0;MQRankSum=-4.083;QD=29.01;ReadPosRankSum=-0.547;VQSLOD=4.1377;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,108,1472	0/1:8,1:9:8.89:9,0,309	0/0:18,0:18:45.12:0,45,575	0/0:18,0:18:44:0,44,527	1/1:0,20:20:54.03:626,54,0	0/0:32,0:32:96.31:0,96,1328	1/1:0,25:25:63.19:755,63,0	0/0:33,0:33:87.27:0,87,1179	0/0:12,0:12:33.11:0,33,462	0/0:24,0:24:66.19:0,66,878	0/0:20,0:20:57.17:0,57,777	0/0:28,0:28:81.27:0,81,1134	1/1:1,13:14:42.09:487,42,0	1/1:1,13:14:36.11:431,36,0	0/0:21,0:21:60.20:0,60,840	0/0:20,0:20:57.18:0,57,780	0/0:43,0:43:99:0,126,1763	0/0:18,0:18:54.18:0,54,752	0/0:22,1:23:30.21:0,30,828	0/0:22,0:22:63.21:0,63,878	0/0:23,0:23:66.22:0,66,921	1/1:0,19:19:48.15:575,48,0	0/0:17,0:17:51.17:0,51,714	0/0:32,0:32:96.32:0,96,1344	1/1:4,7:11:27.05:299,27,0	1/1:4,28:32:9.21:932,9,0	0/0:16,0:15:42.14:0,42,580	1/1:0,9:9:27.08:324,27,0
chr10	83625131	.	GA	G	1365.26	PASS	AB=0.753;AC=23;AF=0.411;AN=56;BaseQRankSum=7.739;DP=439;FS=4.421;HRun=13;HaplotypeScore=65.0690;InbreedingCoeff=0.3544;MQ=50.05;MQ0=10;MQRankSum=-6.724;QD=5.66;ReadPosRankSum=0.421;VQSLOD=2.1753;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,7:21:57.82:119,0,58	0/0:4,0:5:5.11:0,5,67	0/1:7,0:5:9.98:10,0,42	0/0:4,0:5:5.84:0,6,38	1/1:3,9:12:19.66:146,20,0	0/0:16,0:16:38.96:0,39,352	0/1:9,13:22:0.30:210,0,0	0/1:13,14:31:22.97:151,0,23	0/0:21,0:21:32.99:0,33,301	0/0:11,0:10:20.35:0,20,170	0/0:13,0:13:32.81:0,33,283	0/0:13,0:13:35.86:0,36,309	0/1:7,5:13:3.36:127,0,3	1/1:4,8:12:23.80:174,24,0	0/0:24,0:24:45.05:0,45,426	0/1:13,3:16:17.65:18,0,186	0/0:31,1:32:63.01:0,63,585	0/0:29,2:34:34.60:0,35,434	1/1:6,9:14:23.79:173,24,0	1/1:6,7:13:19.86:137,20,0	0/0:6,1:8:5.89:0,6,58	0/1:7,4:11:36.29:36,0,44	0/0:11,1:13:11.85:0,12,98	0/1:14,2:18:2.08:2,0,279	1/1:4,5:9:8.89:66,9,0	0/1:8,8:16:30.80:70,0,31	1/1:10,6:16:8.90:66,9,0	1/1:1,2:4:8:50,8,0
chr10	83625150	.	GAA	G	2567.95	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=8.503;DP=493;FS=0.957;HRun=9;HaplotypeScore=74.4004;InbreedingCoeff=0.9840;MQ=60.82;MQ0=5;MQRankSum=-5.061;QD=23.78;ReadPosRankSum=1.549;VQSLOD=3.2431;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:24:48.35:0,48,189	0/0:9,0:9:24.08:0,24,394	0/0:12,0:10:26.65:0,27,332	0/0:9,0:8:18.01:0,18,230	1/1:2,14:16:39.10:445,39,0	0/0:16,0:16:45.15:0,45,722	1/1:5,19:24:57.15:660,57,0	0/0:38,0:38:69.65:0,70,1025	0/0:22,0:22:57.16:0,57,907	0/0:11,0:10:30.10:0,30,491	0/0:19,0:19:54.66:0,55,888	0/0:16,0:16:48.16:0,48,778	1/1:1,9:10:24.07:275,24,0	1/1:2,15:16:33.09:384,33,0	0/0:23,0:23:60.15:0,60,931	0/0:21,0:20:42.14:0,42,685	0/0:34,0:34:93.26:0,93,1457	0/0:34,0:35:89.79:0,90,1429	0/0:21,0:20:51.17:0,51,833	0/0:16,0:16:48.16:0,48,782	0/0:7,0:12:15.95:0,16,82	1/1:1,12:13:30.09:345,30,0	0/0:12,0:12:30.02:0,30,435	0/0:21,0:21:57.19:0,57,929	1/1:1,5:6:18.05:210,18,0	1/1:6,13:17:30.08:349,30,0	0/0:14,0:14:30.06:0,30,460	1/1:0,3:3:9.03:105,9,0
chr10	83625685	.	G	GTTTGTTT	12822.80	PASS	AB=0.963;AC=19;AF=0.339;AN=56;BaseQRankSum=-3.355;DP=684;FS=12.547;HRun=0;HaplotypeScore=145.3288;InbreedingCoeff=0.9170;MQ=76.59;MQ0=0;MQRankSum=-15.433;QD=50.68;ReadPosRankSum=-2.656;VQSLOD=3.6615;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,16:24:41.99:1222,42,0	0/0:7,0:7:15.03:0,15,277	0/0:40,0:38:52.13:0,52,1021	0/0:18,0:17:30.09:0,30,643	1/1:13,24:38:69.15:2032,69,0	0/0:17,0:17:48.16:0,48,1082	1/1:12,9:21:27.09:912,27,0	0/0:19,0:19:42.13:0,42,893	0/0:30,0:30:81.28:0,81,1852	0/0:27,0:27:72.15:0,72,1578	0/0:22,0:22:48.16:0,48,1118	0/1:25,1:26:53.83:54,0,1261	1/1:4,13:18:30.10:1067,30,0	1/1:11,18:29:48.16:1754,48,0	0/0:36,0:36:87.27:0,87,1911	0/0:19,0:19:42.13:0,42,910	0/0:40,0:40:87.23:0,87,1898	0/0:27,0:27:78.27:0,78,1725	0/0:21,0:21:45.14:0,45,998	0/0:14,0:14:33.11:0,33,771	0/0:23,0:23:63.16:0,63,1416	1/1:3,25:28:60.08:1779,60,0	0/0:15,0:15:42.14:0,42,939	0/0:26,0:26:66.16:0,66,1370	1/1:6,14:22:45.11:1352,45,0	1/1:10,17:27:60.21:2012,60,0	0/0:30,0:29:75.24:0,75,1655	1/1:8,12:20:21.04:638,21,0
chr10	83626843	.	AC	A	2006.28	PASS	AB=0.892;AC=22;AF=0.393;AN=56;BaseQRankSum=7.701;DP=378;FS=5.895;HRun=10;HaplotypeScore=57.7842;InbreedingCoeff=0.6593;MQ=69.22;MQ0=0;MQRankSum=1.310;QD=10.50;ReadPosRankSum=2.062;VQSLOD=2.5033;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:32:40.73:120,41,0	0/0:4,0:4:3.01:0,3,33	0/0:13,0:11:12.03:0,12,133	0/0:9,0:6:9.87:0,10,85	1/1:7,13:20:35.98:312,36,0	0/0:10,0:10:14.66:0,15,194	1/1:2,14:16:38.99:338,39,0	0/0:10,0:18:22.59:0,23,158	0/0:4,0:5:14.87:0,15,147	0/1:4,1:5:17.03:17,0,58	0/0:9,0:9:27.05:0,27,286	0/1:10,1:11:8.01:8,0,141	1/1:3,6:10:23.03:187,23,0	1/1:3,9:12:29.99:259,30,0	0/0:19,0:19:48.13:0,48,530	0/0:10,0:10:9.91:0,10,102	0/0:23,1:26:33.94:0,34,585	0/1:25,2:27:1.26:1,0,632	0/0:11,0:13:23.34:0,23,181	0/1:2,1:8:11.40:11,0,54	0/0:22,0:22:28.41:0,28,140	1/1:3,9:12:29.95:253,30,0	0/0:11,0:11:21.05:0,21,227	0/0:9,1:10:1.04:0,1,232	1/1:4,7:11:21:182,21,0	1/1:6,12:19:13.84:337,14,0	0/0:4,0:8:11.46:0,11,60	1/1:0,7:7:21:182,21,0
chr10	83626853	.	C	CG	386.34	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=-2.140;DP=353;FS=0.760;HRun=0;HaplotypeScore=62.0922;InbreedingCoeff=0.2501;MQ=58.05;MQ0=2;MQRankSum=1.277;QD=6.55;ReadPosRankSum=-1.334;VQSLOD=3.1947;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:66.86:0,67,371	0/0:4,0:4:3.01:0,3,41	0/0:8,0:5:12.04:0,12,166	0/0:9,0:4:9.45:0,9,88	0/0:15,0:15:34.99:0,35,199	0/0:11,0:10:24.06:0,24,297	0/0:16,0:16:40.98:0,41,238	0/1:13,0:13:12.36:12,0,115	0/0:6,0:6:7.25:0,7,159	0/0:7,0:7:20.14:0,20,181	0/0:9,0:9:24.08:0,24,317	0/0:10,0:10:26.82:0,27,264	0/0:9,0:9:26.30:0,26,156	0/0:10,0:11:19.95:0,20,140	0/0:20,0:20:54.14:0,54,697	0/0:8,0:8:16.30:0,16,191	0/0:24,0:24:62.88:0,63,822	0/0:25,0:25:74.97:0,75,920	0/1:16,0:16:7.96:8,0,267	0/1:6,0:6:29.83:30,0,30	1/1:0,17:18:33.09:429,33,0	0/0:12,0:12:32.22:0,32,191	0/0:9,0:9:24.07:0,24,306	0/0:14,0:13:32.96:0,33,368	0/0:12,0:11:23.44:0,23,144	0/0:17,0:17:49.58:0,50,306	0/1:6,0:6:8.27:33,0,8	0/0:7,0:7:20.29:0,20,112
chr10	83627501	.	AC	A	1575.49	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.181;DP=642;FS=36.350;HRun=1;HaplotypeScore=87.0323;InbreedingCoeff=0.9596;MQ=83.30;MQ0=0;MQRankSum=-2.438;QD=38.43;ReadPosRankSum=0.779;VQSLOD=1.1635;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:41:99:1670,120,0	0/0:10,0:10:30.10:0,30,479	0/0:19,0:19:11.64:0,12,747	0/0:21,0:21:46.64:0,47,887	0/0:14,0:14:37.42:0,37,620	0/0:25,0:25:75.24:0,75,1173	0/0:23,0:23:69.20:0,69,1053	0/0:29,0:29:81.21:0,81,1289	0/0:31,0:31:93.32:0,93,1486	0/0:25,0:25:75.25:0,75,1177	0/0:15,0:15:45.14:0,45,690	0/0:25,0:25:75.24:0,75,1172	0/0:21,0:21:63.21:0,63,1005	0/0:24,0:24:66.22:0,66,1047	0/0:34,0:34:99:0,102,1630	0/0:33,0:33:99:0,99,1554	0/0:31,0:31:90.31:0,90,1432	0/0:22,0:22:63.14:0,63,951	0/0:20,0:20:60.18:0,60,913	0/0:17,0:17:45.15:0,45,712	0/0:21,0:21:63.21:0,63,1005	0/0:27,0:27:81.26:0,81,1255	0/0:19,0:19:57.19:0,57,908	0/0:21,0:21:63.21:0,63,1007	0/0:14,0:14:42.14:0,42,665	0/0:21,0:21:63.21:0,63,1007	0/0:32,0:32:96.33:0,96,1534	0/0:7,0:7:18.06:0,18,287
chr10	83628126	.	C	CCTTG	2164.53	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.140;DP=651;FS=3.423;HRun=0;HaplotypeScore=106.2241;InbreedingCoeff=0.9708;MQ=83.48;MQ0=0;MQRankSum=-3.780;QD=56.96;ReadPosRankSum=-0.621;VQSLOD=4.6557;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,34:38:90.31:2259,90,0	0/0:9,0:9:24.08:0,24,445	0/0:24,0:24:56.69:0,57,982	0/0:17,0:17:44.51:0,45,750	0/0:17,0:17:51.17:0,51,939	0/0:22,0:22:63.22:0,63,1151	0/0:36,0:36:99:0,105,1908	0/0:28,0:28:72.23:0,72,1256	0/0:15,0:15:45.15:0,45,827	0/0:18,0:18:51.17:0,51,943	0/0:9,0:9:21.07:0,21,379	0/0:25,0:25:69.24:0,69,1287	0/0:25,0:25:72.25:0,72,1320	0/0:24,0:24:66.21:0,66,1198	0/0:28,0:28:84.29:0,84,1547	0/0:25,0:25:69.24:0,69,1286	0/0:35,0:35:99:0,105,1902	0/0:30,0:30:84.29:0,84,1564	0/0:21,0:21:54.18:0,54,986	0/0:6,0:6:15.05:0,15,280	0/0:66,0:66:99:0,193,3517	0/0:13,0:13:36.12:0,36,672	0/0:7,0:7:18.06:0,18,336	0/0:21,0:21:57.20:0,57,1049	0/0:13,0:13:36.11:0,36,627	0/0:28,0:28:81.27:0,81,1466	0/0:35,0:35:99:0,99,1795	0/0:16,0:16:45.15:0,45,813
chr10	83629725	.	C	CTCT	697.34	PASS	AB=0.950;AC=9;AF=0.161;AN=56;BaseQRankSum=11.661;DP=639;FS=53.691;HRun=0;HaplotypeScore=209.0116;InbreedingCoeff=0.0285;MQ=48.02;MQ0=0;MQRankSum=-8.123;QD=3.56;ReadPosRankSum=0.748;VQSLOD=0.7235;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:25.85:266,26,0	0/0:9,0:9:18.05:0,18,253	0/0:8,0:7:14.90:0,15,175	0/0:11,0:9:7.92:0,8,96	0/0:16,0:16:14.57:0,15,168	0/0:21,0:21:10:0,10,302	0/0:23,0:23:38.32:0,38,527	0/0:29,0:28:0.13:0,0,655	0/0:22,0:22:15.12:0,15,343	0/0:37,0:37:0.95:0,1,808	0/1:17,0:16:44.97:45,0,75	0/0:43,0:42:18.09:0,18,773	0/1:31,0:31:11.57:12,0,552	0/0:35,0:35:34.60:0,35,593	0/1:34,0:34:20.43:20,0,474	0/0:29,0:29:28.94:0,29,559	0/0:17,0:17:26.15:0,26,268	0/0:11,0:11:28.55:0,29,414	0/0:31,0:25:41.85:0,42,644	0/0:17,0:17:11.46:0,11,250	0/1:10,12:22:13.03:166,0,13	0/0:22,0:22:24.37:0,24,322	0/1:23,0:23:6.48:6,0,244	0/0:17,0:17:21.50:0,21,200	0/0:24,0:24:33.77:0,34,478	0/1:34,0:33:99:195,0,205	0/0:21,0:20:16.89:0,17,494	0/1:12,0:12:84.80:127,0,85
chr10	83631191	.	TCTC	T	1310.70	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.802;DP=631;FS=2.368;HRun=0;HaplotypeScore=106.1478;InbreedingCoeff=0.9859;MQ=72.45;MQ0=0;MQRankSum=-1.988;QD=35.42;ReadPosRankSum=-0.318;VQSLOD=3.7582;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,33:37:86.49:1406,86,0	0/0:11,0:11:33.11:0,33,759	0/0:15,0:15:35.80:0,36,717	0/0:13,0:13:22.30:0,22,695	0/0:23,0:23:69.21:0,69,1474	0/0:21,0:21:63.20:0,63,1368	0/0:34,0:34:99:0,99,2050	0/0:28,0:28:81.28:0,81,1844	0/0:24,0:24:72.23:0,72,1595	0/0:19,0:19:54.17:0,54,1184	0/0:13,0:13:36.11:0,36,786	0/0:26,0:26:78.27:0,78,1773	0/0:21,0:21:63.17:0,63,1306	0/0:20,0:20:60.21:0,60,1363	0/0:30,0:30:90.31:0,90,2057	0/0:23,0:23:69.21:0,69,1502	0/0:37,0:37:99:0,108,2490	0/0:32,0:32:90.30:0,90,2008	0/0:18,0:18:54.14:0,54,1075	0/0:6,0:6:18.05:0,18,345	0/0:75,0:75:99:0,223,4979	0/0:13,0:13:36.12:0,36,830	0/0:15,0:15:45.14:0,45,956	0/0:26,0:26:72.23:0,72,1594	0/0:13,0:13:39.13:0,39,877	0/0:19,0:19:54.18:0,54,1178	0/0:10,0:10:30.10:0,30,689	0/0:9,0:9:24.08:0,24,552
chr10	83632703	.	A	AT	1053.03	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-4.039;DP=668;FS=0.565;HRun=9;HaplotypeScore=87.5537;InbreedingCoeff=0.8681;MQ=78.29;MQ0=0;MQRankSum=-0.240;QD=21.94;ReadPosRankSum=-1.815;VQSLOD=3.3780;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:0,0:31:63.15:0,63,186	0/0:11,0:11:29.91:0,30,246	0/0:26,0:27:13.86:0,14,376	0/0:16,0:15:20.20:0,20,216	0/0:22,0:22:60.86:0,61,519	0/0:30,0:30:83.93:0,84,718	0/0:31,0:31:77.58:0,78,661	0/0:33,0:33:80.96:0,81,701	0/0:26,0:26:64.03:0,64,611	0/0:26,1:27:26.79:0,27,461	0/0:14,0:14:35.97:0,36,305	0/0:22,0:22:59.98:0,60,521	0/0:22,0:22:62.73:0,63,532	0/0:21,0:21:53.99:0,54,468	0/0:33,0:33:92.96:0,93,805	0/0:28,0:28:71.96:0,72,622	0/0:48,0:48:99:0,123,1048	0/0:31,2:33:20.61:0,21,637	0/0:21,1:22:23.76:0,24,427	0/0:10,0:10:26.98:0,27,231	1/1:3,19:22:57.15:631,57,0	0/0:16,0:16:45.44:0,45,385	0/0:20,0:20:50.65:0,51,437	0/0:27,0:27:68.92:0,69,589	0/0:21,0:22:62.50:0,62,527	1/1:5,17:22:2.03:479,2,0	0/0:28,0:28:80.98:0,81,703	1/1:1,3:4:6.02:66,6,0
chr10	83634697	.	CA	C	4612.14	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.689;DP=609;FS=1.987;HRun=9;HaplotypeScore=70.5865;InbreedingCoeff=0.9914;MQ=71.98;MQ0=0;MQRankSum=-1.266;QD=21.16;ReadPosRankSum=4.032;VQSLOD=5.6158;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:81.04:741,81,0	0/0:9,0:9:24.06:0,24,268	0/0:24,1:25:24.74:0,25,497	0/0:18,0:17:10.52:0,11,251	1/1:1,20:21:48:439,48,0	0/0:22,0:22:54.09:0,54,590	0/0:20,0:20:60.15:0,60,674	0/0:25,0:25:66.17:0,66,736	0/0:17,0:18:44.94:0,45,481	0/0:26,0:26:69.17:0,69,783	0/0:11,0:11:33.08:0,33,366	0/0:23,1:24:29.70:0,30,587	1/1:2,16:18:45.02:412,45,0	1/1:3,22:25:54.03:494,54,0	0/0:18,0:18:54.13:0,54,603	0/0:19,0:19:54.15:0,54,614	0/0:29,0:29:78.23:0,78,900	0/0:16,0:16:39.08:0,39,428	0/0:25,0:25:63.17:0,63,708	0/0:21,1:22:24.91:0,25,513	1/1:4,33:37:84.04:769,84,0	1/1:3,18:21:39:357,39,0	0/0:14,0:14:36.09:0,36,405	0/0:25,0:25:72.21:0,72,830	1/1:2,23:25:60.03:549,60,0	1/1:6,18:24:19.34:416,19,0	0/0:25,0:25:66.14:0,66,727	1/1:1,15:16:48.01:435,48,0
chr10	83638990	.	C	CT	4423.56	PASS	AB=0.738;AC=26;AF=0.464;AN=56;BaseQRankSum=-3.975;DP=509;FS=0.374;HRun=10;HaplotypeScore=52.9975;InbreedingCoeff=0.8815;MQ=70.11;MQ0=0;MQRankSum=-0.047;QD=18.59;ReadPosRankSum=-1.429;VQSLOD=4.8114;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:83.82:0,84,682	0/0:9,0:9:23.92:0,24,190	0/1:10,1:11:2.28:2,0,167	0/0:12,0:12:12.17:0,12,162	1/1:2,18:20:29.41:491,29,0	0/0:13,0:12:35.68:0,36,264	1/1:0,12:12:30.08:320,30,0	1/1:9,15:24:42.10:442,42,0	0/0:11,0:11:7.33:0,7,199	0/0:29,0:29:71.88:0,72,591	0/0:31,0:31:77.80:0,78,632	0/0:10,0:10:26.96:0,27,222	1/1:5,9:14:35.67:319,36,0	1/1:1,14:15:33.08:352,33,0	0/0:20,0:20:44.91:0,45,366	0/0:17,0:17:44.93:0,45,367	0/0:29,0:29:74.78:0,75,606	0/0:30,0:30:68.89:0,69,564	1/1:4,15:19:47.12:475,47,0	1/1:6,12:18:36.90:356,37,0	1/1:0,0:4:8.52:43,9,0	1/1:2,18:20:48.06:490,48,0	0/0:15,0:15:38.92:0,39,317	0/0:13,0:13:38.93:0,39,316	1/1:2,19:21:42.11:448,42,0	0/1:4,0:19:3.15:173,0,3	1/1:9,18:28:35.96:367,36,0	1/1:3,1:13:25.80:146,26,0
chr10	83639481	.	TC	T	6887.99	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.634;DP=707;FS=3.466;HRun=6;HaplotypeScore=71.0952;InbreedingCoeff=0.9998;MQ=87.31;MQ0=0;MQRankSum=-3.179;QD=28.46;ReadPosRankSum=0.832;VQSLOD=5.5610;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,59:62:99:1805,168,0	0/0:15,0:15:39.60:0,40,513	0/0:21,0:21:53.49:0,53,650	0/0:29,0:29:78.18:0,78,949	1/1:0,15:15:42.11:451,42,0	0/0:15,0:15:36.12:0,36,474	0/0:35,0:35:99:0,99,1301	1/1:3,22:25:66.15:701,66,0	0/0:20,0:20:60.18:0,60,775	0/0:28,0:28:81.24:0,81,1037	0/0:21,0:21:60.20:0,60,788	0/0:24,0:24:66.21:0,66,861	1/1:1,22:23:63.16:676,63,0	1/1:0,20:20:51.13:548,51,0	0/0:37,0:37:99:0,105,1349	0/0:31,0:31:84.26:0,84,1080	0/0:27,0:27:72.22:0,72,934	0/0:24,0:24:72.23:0,72,947	1/1:1,24:25:69.17:741,69,0	1/1:1,16:17:45.11:483,45,0	0/0:37,0:37:99:0,99,1251	1/1:1,16:17:42.10:451,42,0	0/0:20,0:20:57.18:0,57,745	0/0:39,0:39:99:0,108,1407	1/1:1,23:24:63.16:677,63,0	0/0:32,0:32:87.28:0,87,1141	1/1:1,13:14:33.08:355,33,0	0/0:10,0:10:30.10:0,30,392
chr10	83639783	.	CAAA	C	1563.38	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.550;DP=744;FS=11.694;HRun=4;HaplotypeScore=116.0581;InbreedingCoeff=0.9987;MQ=82.53;MQ0=0;MQRankSum=-4.489;QD=42.25;ReadPosRankSum=2.071;VQSLOD=2.1128;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:96.29:1658,96,0	0/0:12,0:12:36.12:0,36,832	0/0:28,0:28:71.27:0,71,1594	0/0:29,0:29:74.01:0,74,1532	0/0:14,0:14:42.14:0,42,994	0/0:22,0:22:66.23:0,66,1559	0/0:26,0:26:78.27:0,78,1809	0/0:29,0:28:84.27:0,84,1882	0/0:27,0:27:81.28:0,81,1916	0/0:28,0:28:84.29:0,84,1966	0/0:23,0:23:66.20:0,66,1471	0/0:32,0:32:96.33:0,96,2269	0/0:25,0:25:75.25:0,75,1694	0/0:30,0:30:87.30:0,87,2058	0/0:26,0:26:78.26:0,78,1784	0/0:26,0:26:78.27:0,78,1843	0/0:48,0:48:99:0,144,3299	0/0:34,0:34:90.31:0,90,2125	0/0:27,0:27:78.27:0,78,1812	0/0:14,0:14:36.12:0,36,851	0/0:48,0:48:99:0,141,3289	0/0:23,0:23:66.21:0,66,1513	0/0:21,0:21:57.18:0,57,1257	0/0:32,0:32:93.32:0,93,2162	0/0:16,0:16:45.15:0,45,1065	0/0:35,0:35:99:0,102,2408	0/0:23,0:23:69.23:0,69,1584	0/0:9,0:9:27.09:0,27,639
chr10	83640960	.	TCACATACACACACACACA	T	2445.31	PASS	AB=0.834;AC=23;AF=0.411;AN=56;BaseQRankSum=0.415;DP=308;FS=2.124;HRun=0;HaplotypeScore=122.4590;InbreedingCoeff=0.5518;MQ=64.07;MQ0=10;MQRankSum=0.628;QD=16.75;ReadPosRankSum=0.700;VQSLOD=2.5876;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:23.94:191,24,0	0/0:8,0:8:18.05:0,18,1104	0/0:14,0:7:16.78:0,17,151	0/1:21,0:6:4.72:5,0,51	0/0:2,0:8:0.47:0,0,1	0/0:12,0:13:30.05:0,30,1276	0/1:8,0:8:5.91:6,0,558	1/1:17,0:16:44.98:391,45,0	0/0:8,0:7:15.02:0,15,766	0/0:8,0:7:21.05:0,21,830	0/0:7,0:7:18.06:0,18,1193	0/0:4,0:4:12.04:0,12,687	0/1:2,0:3:39.96:69,0,40	1/1:0,0:3:2.84:14,3,0	0/0:7,0:7:18.05:0,18,1004	0/0:11,0:11:24.05:0,24,1492	0/0:29,0:29:68.58:0,69,3100	0/0:22,0:22:52.39:0,52,2070	1/1:12,0:11:25.43:309,25,0	1/1:6,0:6:11.66:122,12,0	1/1:10,0:9:7.86:73,8,0	0/1:7,0:8:9.04:9,0,184	0/0:13,0:12:27.05:0,27,1133	0/0:10,0:10:24.08:0,24,1616	1/1:1,0:14:3.01:94,3,0	1/1:1,11:12:26.93:468,27,0	0/1:1,8:9:73.58:612,0,74	1/1:2,9:10:6.02:274,6,0
chr10	83640965	.	TAC	T	191.76	PASS	AB=0.946;AC=20;AF=0.476;AN=42;BaseQRankSum=4.417;DP=329;FS=0.000;HRun=0;HaplotypeScore=57.8517;InbreedingCoeff=0.3697;MQ=57.02;MQ0=11;MQRankSum=-2.789;QD=1.53;ReadPosRankSum=0.223;VQSLOD=0.9993;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:9,0:9:2.36:2,0,58	./.	./.	0/0:6,0:6:0:0,0,0	0/0:15,0:15:9.01:0,9,98	1/1:9,0:9:2.94:21,3,0	./.	0/0:10,0:9:6.02:0,6,85	0/0:9,0:8:9.01:0,9,87	0/0:8,0:8:3.01:0,3,41	1/1:8,0:8:3.01:31,3,0	1/1:3,0:3:2.84:14,3,0	1/1:3,0:3:2.84:14,3,0	0/0:7,0:7:0:0,0,0	0/0:12,0:12:12.01:0,12,133	0/0:29,1:31:18.03:0,18,214	0/1:16,6:22:9.39:112,0,9	1/1:15,0:13:2.84:14,3,0	./.	./.	0/1:10,0:10:0:0,0,0	./.	0/0:12,0:12:12.04:0,12,174	1/1:13,0:13:2.84:14,3,0	1/1:12,0:12:5.68:28,6,0	0/1:10,0:9:4.93:41,0,5	1/1:11,0:10:5.68:28,6,0
chr10	83641979	.	TCTAA	T	7131.69	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=16.015;DP=703;FS=4.870;HRun=0;HaplotypeScore=134.1152;InbreedingCoeff=0.9963;MQ=92.17;MQ0=0;MQRankSum=-11.060;QD=52.44;ReadPosRankSum=-0.683;VQSLOD=5.5753;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,43:43:99:2182,114,0	0/0:9,0:9:27.09:0,27,740	0/0:32,0:33:83.34:0,83,2295	0/0:28,0:28:54.19:0,54,1913	1/1:1,22:23:63.21:1156,63,0	0/0:19,0:19:57.20:0,57,1544	0/0:33,0:33:93.32:0,93,2541	0/0:21,0:21:54.19:0,54,1427	0/0:29,0:29:87.30:0,87,2308	0/0:28,0:28:84.29:0,84,2275	0/0:17,0:17:48.13:0,48,1166	0/0:34,0:34:96.33:0,96,2595	1/1:0,24:24:72.25:1372,72,0	1/1:0,19:19:51.17:988,51,0	0/0:27,0:27:81.28:0,81,2150	0/0:32,0:32:93.32:0,93,2474	0/0:28,0:27:78.25:0,78,2043	0/0:23,0:23:69.19:0,69,1760	0/0:36,0:36:99:0,108,2895	0/0:20,0:20:57.20:0,57,1503	0/0:44,0:44:99:0,129,3435	1/1:0,12:12:36.12:679,36,0	0/0:18,0:18:54.19:0,54,1437	0/0:27,1:28:26.16:0,26,2128	1/1:1,14:15:39.13:755,39,0	0/0:33,0:33:93.32:0,93,2489	0/0:20,0:20:54.19:0,54,1446	0/0:7,0:7:15.05:0,15,411
chr10	83642801	.	G	GA	1188.77	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-7.627;DP=733;FS=1.761;HRun=10;HaplotypeScore=96.5044;InbreedingCoeff=0.6922;MQ=61.10;MQ0=1;MQRankSum=1.779;QD=17.23;ReadPosRankSum=-0.155;VQSLOD=3.6684;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,48:55:99:1283,122,0	0/0:16,0:16:44.94:0,45,369	0/0:18,0:15:14.20:0,14,120	0/1:14,0:13:5.43:5,0,134	0/0:24,0:24:65.90:0,66,539	0/0:23,0:23:59.92:0,60,493	0/0:22,0:22:59.92:0,60,493	0/0:36,1:38:58.48:0,58,665	0/0:25,0:25:65.91:0,66,542	0/0:27,0:27:29.77:0,30,414	0/0:22,0:22:47.87:0,48,393	0/0:25,1:26:21.89:0,22,380	0/0:21,0:23:58.86:0,59,465	0/0:21,0:21:56.93:0,57,468	0/0:31,0:32:82.89:0,83,665	0/0:29,0:29:46.90:0,47,539	0/0:26,0:28:70.36:0,70,616	0/0:38,2:40:37.91:0,38,724	0/0:34,0:35:51.39:0,51,495	0/0:12,0:12:35.96:0,36,295	0/0:28,0:28:53.89:0,54,440	0/0:22,1:23:24.93:0,25,411	0/0:21,0:21:50.92:0,51,419	0/0:39,3:43:37.99:0,38,715	0/0:25,0:27:64.63:0,65,490	0/0:25,0:27:70.95:0,71,572	0/0:21,0:21:53.92:0,54,442	0/0:11,0:11:32.96:0,33,271
chr10	83642853	.	CAGAT	C	2563.09	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=5.259;DP=760;FS=0.864;HRun=0;HaplotypeScore=176.2371;InbreedingCoeff=0.3773;MQ=57.24;MQ0=1;MQRankSum=-6.525;QD=13.71;ReadPosRankSum=-5.927;VQSLOD=1.9552;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:87.30:0,87,2192	0/0:16,0:16:45.12:0,45,993	0/0:36,0:29:84.26:0,84,1677	0/0:26,0:21:39.78:0,40,843	0/1:19,0:19:14.61:15,0,337	0/0:18,0:18:48.16:0,48,1209	0/0:34,0:34:16.94:0,17,531	0/1:32,0:32:44.33:733,0,44	0/0:28,0:28:78.23:0,78,1809	0/0:28,0:28:78.27:0,78,1991	0/0:25,0:25:69.17:0,69,1464	0/0:25,0:25:72.20:0,72,1650	0/0:24,0:24:6.63:0,7,760	0/0:22,0:22:7.96:0,8,652	0/0:34,0:34:99:0,99,2210	0/0:35,0:35:99:0,99,2475	0/0:37,0:37:99:0,102,2286	0/0:36,0:36:67.10:0,67,2303	0/1:26,0:25:99:263,0,116	0/1:19,0:19:55.22:55,0,158	1/1:5,28:33:7.10:77,7,0	0/0:20,0:20:8.05:0,8,445	0/0:12,0:12:36.11:0,36,904	0/0:53,0:53:99:0,147,3466	0/0:29,0:29:31.46:0,31,629	1/1:2,22:24:60.09:978,60,0	0/1:22,0:22:99:160,0,302	1/1:0,12:12:24.08:443,24,0
chr10	83642884	.	G	GCAGA	11379.75	PASS	AB=0.524;AC=19;AF=0.339;AN=56;BaseQRankSum=0.440;DP=803;FS=4.010;HRun=0;HaplotypeScore=157.7619;InbreedingCoeff=0.9020;MQ=58.20;MQ0=3;MQRankSum=-4.597;QD=41.23;ReadPosRankSum=-3.155;VQSLOD=4.5883;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:90.28:0,90,1460	0/0:14,0:15:33.11:0,33,525	0/0:30,0:26:42.14:0,42,675	0/0:28,0:24:48.15:0,48,745	1/1:5,16:21:42.14:1038,42,0	0/0:22,0:22:51.17:0,51,853	1/1:20,16:37:45.15:1050,45,0	1/1:30,11:44:1.47:1015,1,0	0/0:35,0:35:78.27:0,78,1304	0/0:29,0:29:69.24:0,69,1154	0/0:25,0:25:57.10:0,57,820	0/0:30,0:30:75.23:0,75,1201	1/1:6,20:28:63.22:1554,63,0	1/1:7,15:23:51.18:1244,51,0	0/0:32,0:32:84.26:0,84,1354	0/0:27,0:28:72.22:0,72,1133	0/0:38,0:38:87.30:0,87,1437	0/0:37,0:37:83.87:0,84,1404	1/1:11,10:24:39.10:860,39,0	0/1:2,20:22:5.01:987,0,5	0/0:38,0:38:45.03:0,45,663	1/1:9,11:20:24.08:583,24,0	0/0:12,0:12:27.09:0,27,451	0/0:51,0:51:99:0,123,2016	1/1:7,19:27:60.21:1468,60,0	0/0:22,0:22:48.11:0,48,749	1/1:7,22:30:19.07:1579,19,0	0/0:16,0:16:15.05:0,15,248
chr10	83643916	.	C	CAATCTCAAAT	3715.72	PASS	AB=0.632;AC=5;AF=0.089;AN=56;BaseQRankSum=-4.280;DP=483;FS=3.690;HRun=0;HaplotypeScore=140.4208;InbreedingCoeff=0.7126;MQ=83.05;MQ0=0;MQRankSum=-7.567;QD=80.78;ReadPosRankSum=0.814;VQSLOD=3.7869;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.19:0,54,1495	0/0:1,0:1:3.01:0,3,94	0/0:17,0:17:44.94:0,45,1122	0/0:11,0:11:26.47:0,26,611	0/0:17,0:17:42.13:0,42,1208	0/0:15,0:15:42.13:0,42,1178	0/0:19,0:19:57.20:0,57,1691	0/0:29,0:29:69.19:0,69,1705	0/0:26,0:26:69.24:0,69,2155	0/0:21,0:21:51.16:0,51,1461	0/0:19,0:19:42.14:0,42,1286	0/0:15,0:15:45.15:0,45,1380	0/0:15,0:15:39.10:0,39,1146	0/0:20,0:20:54.17:0,54,1549	0/0:18,0:18:39.13:0,39,1137	0/0:15,0:15:42.14:0,42,1311	0/0:30,0:30:81.25:0,81,2300	0/0:23,0:23:66.19:0,66,1886	0/0:13,0:13:30.05:0,30,691	0/0:23,0:23:51.18:0,51,1478	1/1:4,5:12:21.07:829,21,0	0/0:13,0:13:36.12:0,36,1080	0/0:13,0:13:33.10:0,33,921	0/0:20,0:20:51.18:0,51,1547	0/0:10,0:10:24.07:0,24,680	0/1:10,13:24:42.61:2119,0,43	0/0:15,0:15:39.12:0,39,1148	1/1:4,5:10:15.05:767,15,0
chr10	83644349	.	AG	A	1654.39	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.424;DP=650;FS=2.602;HRun=2;HaplotypeScore=118.3483;InbreedingCoeff=0.9985;MQ=85.84;MQ0=0;MQRankSum=-13.961;QD=12.82;ReadPosRankSum=1.168;VQSLOD=2.7561;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:30,3:33:47.14:340,47,0	0/0:13,0:13:39.13:0,39,583	0/0:25,0:25:69.18:0,69,939	0/0:21,0:21:57.18:0,57,803	0/0:13,0:13:36.11:0,36,517	0/0:18,0:18:54.18:0,54,809	1/1:25,0:25:50.79:393,51,0	1/1:19,0:19:26.95:219,27,0	0/0:22,0:22:66.22:0,66,989	0/0:25,0:25:72.23:0,72,1045	0/0:20,0:20:51.13:0,51,697	0/0:30,0:30:90.30:0,90,1347	0/0:28,0:28:84.28:0,84,1258	0/0:23,0:23:66.22:0,66,986	0/0:26,0:26:75.25:0,75,1124	0/0:20,0:19:60.20:0,60,899	0/0:49,0:49:99:0,144,2157	0/0:21,0:21:63.20:0,63,924	1/1:8,0:8:20.97:172,21,0	1/1:17,0:17:35.85:276,36,0	0/0:47,0:47:99:0,135,1977	0/0:16,0:16:48.13:0,48,678	0/0:19,0:19:57.17:0,57,814	0/0:40,0:40:99:0,120,1771	0/0:18,0:18:54.17:0,54,785	0/0:19,0:19:51.17:0,51,765	1/1:25,2:27:58.79:443,59,0	0/0:8,0:8:24.08:0,24,360
chr10	83644350	.	GGC	G	2389.74	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.707;DP=606;FS=3.879;HRun=0;HaplotypeScore=121.7694;InbreedingCoeff=0.9986;MQ=87.24;MQ0=0;MQRankSum=-13.785;QD=26.26;ReadPosRankSum=0.962;VQSLOD=4.9912;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:20:47.82:464,48,0	0/0:13,0:13:39.13:0,39,792	0/0:24,0:24:69.03:0,69,1251	0/0:20,0:20:57.19:0,57,1090	0/0:13,0:13:39.13:0,39,771	0/0:18,0:18:54.19:0,54,1097	1/1:3,17:20:57.10:573,57,0	1/1:1,9:10:30.08:324,30,0	0/0:22,0:22:66.23:0,66,1340	0/0:25,0:25:72.24:0,72,1429	0/0:20,0:20:54.14:0,54,922	0/0:30,0:30:90.31:0,90,1829	0/0:29,0:29:87.30:0,87,1746	0/0:23,0:23:69.24:0,69,1366	0/0:25,0:25:75.26:0,75,1524	0/0:20,0:19:60.21:0,60,1219	0/0:48,0:48:99:0,144,2926	0/0:22,0:22:66.18:0,66,1300	1/1:1,6:7:21.05:225,21,0	1/1:1,11:12:36.08:373,36,0	0/0:45,0:45:99:0,135,2703	0/0:16,0:16:48.13:0,48,902	0/0:19,0:19:57.20:0,57,1137	0/0:40,0:40:99:0,120,2400	0/0:18,0:18:54.17:0,54,1040	0/0:17,0:17:51.18:0,51,1036	1/1:2,20:22:59.94:620,60,0	0/0:8,0:8:24.08:0,24,488
chr10	83644353	.	AGC	A	1783.89	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.378;DP=598;FS=1.450;HRun=0;HaplotypeScore=122.2258;InbreedingCoeff=0.9976;MQ=88.16;MQ0=0;MQRankSum=-13.704;QD=21.49;ReadPosRankSum=1.664;VQSLOD=4.3377;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:46.37:366,46,0	0/0:13,0:13:39.13:0,39,791	0/0:25,0:25:62.34:0,62,1164	0/0:20,0:20:60.06:0,60,1013	0/0:15,0:15:45.13:0,45,812	0/0:19,0:19:57.15:0,57,1048	1/1:0,17:17:50.92:425,51,0	1/1:0,9:9:27.01:243,27,0	0/0:22,0:22:66.21:0,66,1303	0/0:25,0:25:75.25:0,75,1454	0/0:12,0:12:33.10:0,33,617	0/0:30,0:30:90.30:0,90,1784	0/0:27,0:27:81.25:0,81,1553	0/0:23,0:23:69.20:0,69,1328	0/0:28,0:28:84.29:0,84,1682	0/0:21,0:20:63.20:0,63,1242	0/0:51,0:51:99:0,153,3028	0/0:23,0:23:69.24:0,69,1381	1/1:0,6:6:18.01:162,18,0	1/1:0,11:11:32.97:280,33,0	0/0:45,0:45:99:0,135,2669	0/0:15,0:15:45.14:0,45,870	0/0:19,0:19:57.17:0,57,1048	0/0:39,0:39:99:0,117,2372	0/0:16,0:16:48.15:0,48,936	0/0:19,0:19:57.18:0,57,1083	1/1:2,20:22:57.86:497,58,0	0/0:8,0:8:24.08:0,24,487
chr10	83644362	.	ATTC	A	4558.62	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.510;DP=581;FS=0.000;HRun=0;HaplotypeScore=123.7022;InbreedingCoeff=0.9978;MQ=83.93;MQ0=0;MQRankSum=-13.608;QD=54.27;ReadPosRankSum=1.086;VQSLOD=6.8369;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:51.17:896,51,0	0/0:12,0:12:36.12:0,36,874	0/0:21,0:21:54.17:0,54,1220	0/0:16,0:16:48.11:0,48,985	0/0:13,0:13:39.13:0,39,945	0/0:17,0:17:51.18:0,51,1256	1/1:2,17:19:57.20:1046,57,0	1/1:0,9:9:27.09:502,27,0	0/0:22,0:22:66.23:0,66,1627	0/0:27,0:27:81.28:0,81,1979	0/0:11,0:11:30.10:0,30,738	0/0:29,0:29:87.28:0,87,2068	0/0:28,0:28:84.29:0,84,2034	0/0:23,0:23:69.24:0,69,1693	0/0:30,0:30:90.27:0,90,2062	0/0:20,0:19:60.19:0,60,1430	0/0:49,0:49:99:0,148,3593	0/0:24,0:24:72.20:0,72,1706	1/1:0,6:6:18.06:334,18,0	1/1:1,11:12:36.12:666,36,0	0/0:43,0:43:99:0,129,3171	0/0:20,0:20:60.21:0,60,1435	0/0:16,0:16:48.16:0,48,1154	0/0:37,0:37:99:0,111,2713	0/0:14,0:14:42.14:0,42,1033	0/0:16,0:16:48.16:0,48,1170	1/1:1,20:21:60.21:1113,60,0	0/0:9,0:9:27.09:0,27,665
chr10	83645006	.	G	GC	1839.20	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-5.727;DP=598;FS=4.816;HRun=6;HaplotypeScore=67.6221;InbreedingCoeff=0.9613;MQ=80.41;MQ0=0;MQRankSum=-1.710;QD=22.71;ReadPosRankSum=-0.432;VQSLOD=2.7295;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:72.13:0,72,726	0/0:8,0:8:24.05:0,24,245	0/0:20,0:18:10.48:0,10,134	0/0:21,0:21:25.30:0,25,243	0/0:14,0:14:39.01:0,39,384	0/0:21,0:21:55.83:0,56,522	0/0:40,0:40:99:0,108,1064	0/0:17,0:17:47.74:0,48,457	0/0:23,0:23:60.11:0,60,604	0/0:18,0:18:45.73:0,46,400	0/0:11,0:11:29.98:0,30,282	0/0:37,0:37:96.06:0,96,953	0/0:19,0:19:51.02:0,51,500	0/0:21,0:21:60.10:0,60,601	0/0:22,0:22:60.07:0,60,587	0/0:19,0:19:51.07:0,51,505	0/0:36,0:36:92.75:0,93,911	0/0:24,0:24:72.12:0,72,717	0/0:14,0:14:33.03:0,33,322	0/0:14,0:14:33.06:0,33,327	1/1:8,44:52:99:1267,102,0	0/0:14,0:14:33.06:0,33,328	0/0:9,0:9:24.01:0,24,224	0/0:22,0:22:66.14:0,66,666	0/0:21,0:21:51.08:0,51,505	1/1:2,21:23:56.55:597,57,0	0/0:22,0:22:50.93:0,51,490	1/1:1,5:6:9.03:113,9,0
chr10	83645649	.	TGAGAGAGAGA	T	1070.41	PASS	AB=0.949;AC=23;AF=0.460;AN=50;BaseQRankSum=6.377;DP=505;FS=11.686;HRun=0;HaplotypeScore=177.6394;InbreedingCoeff=0.6609;MQ=62.83;MQ0=5;MQRankSum=-5.150;QD=4.44;ReadPosRankSum=-0.675;VQSLOD=1.7409;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:26:0:0,0,0	0/0:9,0:9:9.03:0,9,327	./.	./.	1/1:17,1:19:6:93,6,0	0/0:10,0:10:15.05:0,15,654	1/1:18,0:23:6.02:113,6,0	0/1:27,0:27:0:0,0,0	0/1:21,0:21:1.54:2,0,298	0/0:17,0:17:18.06:0,18,649	0/0:12,0:12:6.02:0,6,209	0/0:21,0:21:26.76:0,27,1135	1/1:10,4:15:6.02:158,6,0	1/1:11,2:15:9.03:223,9,0	0/0:16,0:17:8.98:0,9,74	0/0:27,0:26:36.12:0,36,1493	0/0:8,0:13:15.05:0,15,627	0/0:17,0:17:30.10:0,30,1270	./.	1/1:15,0:19:12.91:206,13,0	1/1:15,0:18:3.01:56,3,0	1/1:15,1:17:8.73:93,9,0	0/0:13,0:13:12.04:0,12,324	0/0:26,0:27:39.13:0,39,1654	0/0:11,0:16:2.99:0,3,23	1/1:17,0:18:3.01:70,3,0	1/1:10,0:13:8.86:154,9,0	1/1:3,0:6:3.01:70,3,0
chr10	83646612	.	GAGTTCC	G	897.94	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=5.200;DP=930;FS=1.027;HRun=0;HaplotypeScore=145.7781;InbreedingCoeff=0.9956;MQ=39.28;MQ0=211;MQRankSum=-4.842;QD=23.02;ReadPosRankSum=1.097;VQSLOD=3.2607;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,22:23:42.14:992,42,0	0/0:22,0:15:45.15:0,45,1575	./.	./.	0/0:26,0:20:27.09:0,27,743	0/0:26,0:21:45.15:0,45,1548	0/0:38,0:29:66.23:0,66,2341	0/0:31,0:24:66.18:0,66,2111	0/0:36,0:25:63.22:0,63,2166	0/0:42,0:31:90.30:0,90,3097	0/0:19,0:12:24.08:0,24,702	0/0:40,0:29:69.24:0,69,2445	0/0:37,0:29:75.25:0,75,2517	0/0:35,0:28:56.94:0,57,1903	0/0:47,0:39:75.26:0,75,2528	0/0:39,0:31:75.26:0,75,2627	0/0:52,0:41:66.17:0,66,1961	0/0:54,0:31:69.06:0,69,2323	0/0:36,0:22:66.23:0,66,2309	0/0:30,0:22:63.21:0,63,2030	0/0:52,0:41:87.12:0,87,2673	0/0:41,0:29:63.21:0,63,2121	0/0:26,0:17:36.07:0,36,1042	0/0:42,0:35:66.22:0,66,2131	0/0:28,0:17:36.12:0,36,1270	0/0:38,0:29:87.30:0,87,3021	0/0:39,0:29:78.26:0,78,2630	0/0:15,0:9:27.09:0,27,963
chr10	83646700	.	T	TC	1080.28	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.550;DP=791;FS=3.860;HRun=0;HaplotypeScore=89.4172;InbreedingCoeff=0.9653;MQ=53.64;MQ0=7;MQRankSum=-10.672;QD=10.39;ReadPosRankSum=2.049;VQSLOD=3.9707;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:47:99:0,132,1790	0/0:11,0:11:33.11:0,33,461	0/0:35,0:16:47.89:0,48,634	0/0:23,0:10:30.08:0,30,394	1/1:4,17:16:29.84:222,30,0	0/0:20,0:20:57.19:0,57,797	0/0:33,0:32:78.24:0,78,1065	0/0:24,0:24:63.21:0,63,881	0/0:20,0:20:57.19:0,57,796	0/0:31,0:31:93.27:0,93,1264	0/0:14,0:14:42.14:0,42,585	0/0:34,0:34:99:0,102,1425	1/1:2,17:19:32.62:246,33,0	1/1:2,23:25:38.83:294,39,0	0/0:26,0:26:75.25:0,75,1048	0/0:34,0:33:96.32:0,96,1341	0/0:36,0:36:87.26:0,87,1195	0/0:45,1:45:99:0,100,1671	0/0:31,0:30:84.28:0,84,1173	0/0:25,0:25:75.22:0,75,1013	0/0:57,0:56:99:0,156,2094	1/1:3,14:13:35.55:265,36,0	0/0:22,0:22:63.20:0,63,863	0/0:45,0:43:99:0,105,1451	1/1:4,18:15:4.21:221,4,0	0/0:35,0:35:99:0,102,1426	0/0:21,0:21:63.20:0,63,866	0/0:15,0:15:45.15:0,45,629
chr10	83646701	.	A	ATG	1994.42	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.475;DP=803;FS=2.256;HRun=0;HaplotypeScore=102.2584;InbreedingCoeff=0.9995;MQ=53.56;MQ0=7;MQRankSum=-10.362;QD=18.13;ReadPosRankSum=1.793;VQSLOD=3.8320;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:47:99:0,132,2098	0/0:12,0:12:33.11:0,33,533	0/0:36,0:18:48.16:0,48,759	0/0:23,0:10:27.56:0,28,429	1/1:5,17:17:30.09:351,30,0	0/0:20,0:20:57.19:0,57,924	0/0:33,0:32:78.26:0,78,1249	0/0:25,0:25:66.22:0,66,1056	0/0:20,0:20:57.19:0,57,928	0/0:29,0:29:87.30:0,87,1419	0/0:16,0:16:42.14:0,42,683	0/0:35,0:34:99:0,102,1659	1/1:4,17:21:36.10:428,36,0	1/1:2,23:25:39.12:462,39,0	0/0:26,0:26:75.26:0,75,1223	0/0:35,0:34:96.33:0,96,1552	0/0:34,0:34:87.28:0,87,1383	0/0:46,0:46:99:0,106,1933	0/0:32,0:30:87.29:0,87,1391	0/0:24,0:24:72.23:0,72,1143	0/0:57,0:56:99:0,165,2533	1/1:5,14:15:39.10:455,39,0	0/0:23,0:23:63.20:0,63,1004	0/0:44,0:42:99:0,108,1713	1/1:5,18:16:39.10:472,39,0	0/0:37,0:37:99:0,105,1689	0/0:21,0:21:63.20:0,63,997	0/0:15,0:15:45.15:0,45,734
chr10	83646702	.	A	ATGG	2637.81	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.739;DP=811;FS=2.961;HRun=0;HaplotypeScore=114.3215;InbreedingCoeff=0.9995;MQ=53.68;MQ0=7;MQRankSum=-10.544;QD=23.55;ReadPosRankSum=2.468;VQSLOD=3.7465;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,2:48:99:0,132,2202	0/0:12,0:12:33.07:0,33,485	0/0:35,0:18:54.15:0,54,845	0/0:24,0:11:27.09:0,27,446	1/1:22,0:17:30.10:485,30,0	0/0:21,0:21:54.18:0,54,921	0/0:35,0:34:78.25:0,78,1300	0/0:26,0:26:69.21:0,69,1124	0/0:20,0:20:57.18:0,57,943	0/0:29,0:29:87.30:0,87,1484	0/0:16,0:16:48.14:0,48,766	0/0:35,0:34:99:0,102,1689	1/1:21,0:21:36.10:532,36,0	1/1:25,0:25:39.13:634,39,0	0/0:28,0:28:75.24:0,75,1252	0/0:35,0:34:93.29:0,93,1531	0/0:33,1:34:81.28:0,81,1376	0/0:45,1:45:94.19:0,94,1920	0/0:32,0:30:84.29:0,84,1431	0/0:24,0:24:72.25:0,72,1212	0/0:55,0:54:99:0,162,2613	1/1:20,0:16:39.13:607,39,0	0/0:23,0:23:66.21:0,66,1097	0/0:45,1:44:99:0,111,1822	1/1:24,0:17:37.36:556,37,0	0/0:37,0:37:99:0,111,1835	0/0:20,0:20:57.19:0,57,972	0/0:15,0:15:45.15:0,45,768
chr10	83648019	.	C	CAG	17543.78	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-17.698;DP=737;FS=1.564;HRun=0;HaplotypeScore=84.0416;InbreedingCoeff=0.9978;MQ=78.36;MQ0=0;MQRankSum=-0.109;QD=47.16;ReadPosRankSum=-1.109;VQSLOD=5.7337;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,39:47:99:2017,108,0	0/0:17,0:17:51.13:0,51,689	0/0:14,0:14:36.02:0,36,439	0/0:20,0:20:15.33:0,15,360	1/1:2,13:15:33.11:605,33,0	0/0:16,0:16:48.14:0,48,685	1/1:3,36:41:99:1853,99,0	1/1:2,38:41:99:2083,120,0	0/0:25,0:25:66.21:0,66,951	0/0:25,0:25:75.25:0,75,1104	0/0:9,0:9:27.08:0,27,369	0/0:39,0:39:99:0,111,1576	1/1:0,17:17:42.14:786,42,0	1/1:2,25:28:66.23:1218,66,0	0/0:41,0:41:99:0,120,1764	0/0:21,0:21:60.20:0,60,883	0/0:40,0:40:99:0,114,1659	0/0:36,0:36:99:0,108,1561	1/1:1,13:14:42.14:778,42,0	1/1:0,21:21:57.20:1065,57,0	1/1:2,35:38:96.33:1796,96,0	1/1:0,13:13:39.13:730,39,0	0/0:24,0:24:69.22:0,69,995	0/0:38,0:38:99:0,111,1566	1/1:1,22:23:56.91:1067,57,0	1/1:0,33:34:96.28:1692,96,0	1/1:0,19:20:51.17:953,51,0	1/1:0,20:20:48.16:898,48,0
chr10	83649621	.	A	ACTGAGCAC	34357.48	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=5.743;DP=656;FS=7.138;HRun=0;HaplotypeScore=175.6953;InbreedingCoeff=0.9744;MQ=69.17;MQ0=0;MQRankSum=-19.326;QD=101.35;ReadPosRankSum=-3.125;VQSLOD=4.4990;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,21:36:87.17:3473,87,0	0/0:8,0:8:24.07:0,24,602	0/0:14,0:14:29.30:0,29,766	0/0:17,0:16:38.48:0,38,840	1/1:4,14:18:29.82:1323,30,0	0/0:25,0:25:75.24:0,75,2062	1/1:13,17:33:84.20:3339,84,0	1/1:12,13:29:84.25:3105,84,0	0/0:34,0:34:99:0,99,2737	0/0:27,0:27:81.28:0,81,2266	0/0:20,0:20:60.19:0,60,1616	0/0:27,0:27:78.25:0,78,2122	1/1:3,24:30:80.97:3541,81,0	1/1:6,16:23:57.20:2450,57,0	0/0:33,0:33:96.33:0,96,2630	0/0:34,0:34:93.31:0,93,2517	0/0:23,0:23:63.19:0,63,1688	0/0:12,0:12:30.10:0,30,849	1/1:10,11:22:54.14:2143,54,0	1/1:1,19:23:63.13:2545,63,0	1/1:10,3:16:18.06:795,18,0	1/1:4,9:13:30.10:1324,30,0	0/0:15,0:15:42.14:0,42,1181	0/0:28,0:28:84.29:0,84,2357	1/1:1,18:19:53.76:2263,54,0	1/1:10,27:40:29.46:4554,29,0	1/1:9,20:34:81.28:3479,81,0	1/1:3,0:3:2.99:24,3,0
chr10	83649908	.	CA	C	3655.58	PASS	AB=0.969;AC=50;AF=0.893;AN=56;BaseQRankSum=1.215;DP=557;FS=4.458;HRun=1;HaplotypeScore=124.7417;InbreedingCoeff=-0.1260;MQ=72.57;MQ0=0;MQRankSum=-3.684;QD=6.56;ReadPosRankSum=8.175;VQSLOD=0.5533;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:45,0:45:95.83:367,96,0	1/1:9,0:9:21.44:89,21,0	0/1:13,0:13:21.25:43,0,21	0/1:10,3:12:4.59:65,0,5	1/1:21,0:21:19.59:141,20,0	1/1:15,0:15:7.26:68,7,0	1/1:35,0:35:55.35:224,55,0	0/1:28,0:28:24.69:85,0,25	1/1:14,0:14:10.42:101,10,0	1/1:21,0:21:36.65:120,37,0	0/1:10,0:10:0.94:42,0,1	1/1:34,0:34:23.75:192,24,0	1/1:20,0:20:43.86:171,44,0	1/1:22,0:22:28.41:170,28,0	1/1:30,1:31:60.13:235,60,0	1/1:28,1:29:8.79:163,9,0	1/1:19,0:19:21.82:119,22,0	0/1:12,0:12:19.11:45,0,19	1/1:17,1:18:9.98:144,10,0	1/1:11,0:11:25.64:108,26,0	1/1:45,0:45:92.82:391,93,0	1/1:10,1:11:1.15:76,1,0	1/1:13,1:14:25.66:105,26,0	1/1:29,0:29:13.30:156,13,0	1/1:13,0:13:6.22:86,6,0	1/1:10,0:10:17.46:55,17,0	1/1:8,0:7:18.20:74,18,0	0/1:7,0:7:18.68:19,0,28
chr10	83650381	.	GAAGAAA	G	949.65	PASS	AB=0.953;AC=9;AF=0.161;AN=56;BaseQRankSum=8.638;DP=398;FS=30.945;HRun=0;HaplotypeScore=85.8292;InbreedingCoeff=0.0615;MQ=81.02;MQ0=8;MQRankSum=-5.349;QD=9.22;ReadPosRankSum=4.904;VQSLOD=0.2598;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:17:42.27:0,42,395	0/0:9,0:9:27.01:0,27,402	0/0:32,0:15:30.99:0,31,253	0/0:25,0:15:15.60:0,16,167	0/1:20,0:20:99:130,0,109	0/0:20,0:20:53.95:0,54,843	0/0:16,0:16:35.51:0,36,400	0/1:25,0:26:99:184,0,160	0/0:10,0:10:26.93:0,27,315	0/0:12,0:12:35.87:0,36,502	0/0:15,0:15:38.99:0,39,463	0/0:11,0:11:20.93:0,21,229	0/0:9,0:9:20.85:0,21,172	0/1:7,0:7:30.56:31,0,106	0/0:12,0:10:26.92:0,27,287	0/0:8,0:7:21.02:0,21,337	0/0:15,0:15:32.95:0,33,467	0/0:17,0:17:45.02:0,45,828	0/1:14,0:14:95.88:96,0,203	0/1:8,1:9:34.03:180,0,34	0/0:7,0:7:14.04:0,14,143	0/1:7,1:8:71.16:71,0,79	0/0:6,0:6:11.99:0,12,130	0/0:12,0:12:31.33:0,31,707	1/1:3,4:8:17.81:259,18,0	0/0:24,0:23:17.96:0,18,420	0/1:10,1:11:79.59:146,0,80	0/0:18,0:18:38.15:0,38,433
chr10	83650509	.	ATGTG	A	162.36	PASS	AB=1.000;AC=15;AF=0.313;AN=48;BaseQRankSum=3.085;DP=330;FS=3.240;HRun=0;HaplotypeScore=105.5447;InbreedingCoeff=0.5569;MQ=58.81;MQ0=6;MQRankSum=-2.497;QD=2.19;ReadPosRankSum=1.823;VQSLOD=2.0459;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:5.99:0,6,49	0/0:5,0:4:2.97:0,3,20	./.	./.	./.	0/0:22,0:21:8.82:0,9,201	0/0:15,0:15:9.03:0,9,204	./.	0/0:9,0:9:6.02:0,6,139	0/0:13,0:12:11.86:0,12,182	0/0:12,1:13:12.04:0,12,271	0/0:7,0:7:3.01:0,3,68	1/1:4,1:5:3.01:38,3,0	1/1:2,1:3:3.01:38,3,0	0/0:5,0:5:3.01:0,3,69	0/0:11,0:11:15.05:0,15,327	0/0:29,0:25:33.04:0,33,675	0/0:16,0:13:14.85:0,15,256	1/1:10,0:11:3:28,3,0	0/1:7,0:7:0:0,0,0	1/1:19,0:18:2.99:24,3,0	1/1:5,2:7:6.02:75,6,0	0/0:8,0:8:9.03:0,9,196	0/0:16,0:16:11.66:0,12,228	1/1:13,2:15:6.02:78,6,0	0/0:20,0:21:30.64:0,31,445	1/1:6,0:6:2.98:21,3,0	0/0:8,0:9:5.97:0,6,70
chr10	83650555	.	AT	A	2277.74	PASS	AB=1.000;AC=38;AF=0.704;AN=54;BaseQRankSum=-4.077;DP=306;FS=17.049;HRun=1;HaplotypeScore=71.9242;InbreedingCoeff=0.2293;MQ=59.12;MQ0=9;MQRankSum=-3.738;QD=9.26;ReadPosRankSum=-0.710;VQSLOD=-0.3192;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,3:15:12.01:130,12,0	./.	0/0:15,0:5:7.63:0,8,94	0/0:28,0:9:10.27:0,10,141	1/1:13,0:13:9.33:23,9,0	0/1:11,0:11:16.09:54,0,16	0/0:5,0:5:4.53:0,5,16	1/1:28,1:26:51.45:622,51,0	0/0:4,0:4:4.74:0,5,16	0/1:9,0:9:16.26:123,0,16	1/1:12,0:12:3.88:86,4,0	0/0:5,0:5:2.22:0,2,7	1/1:7,0:7:8.64:106,9,0	1/1:4,0:4:3.01:37,3,0	0/1:10,0:8:2.83:17,0,3	1/1:10,1:9:6.48:95,6,0	0/1:21,0:16:16.71:48,0,17	1/1:15,2:14:6.59:142,7,0	1/1:7,1:8:20.87:200,21,0	1/1:4,0:4:4.28:11,4,0	1/1:9,0:9:4.56:35,5,0	1/1:5,0:5:7.57:76,8,0	0/1:8,0:7:19.60:41,0,20	0/1:10,0:10:13.82:14,0,14	1/1:8,0:7:13.18:129,13,0	1/1:19,0:18:39:270,39,0	1/1:5,0:4:3.59:46,4,0	1/1:9,2:11:17.18:129,17,0
chr10	83650556	.	T	TA	6087.31	PASS	AC=46;AF=0.852;AN=54;BaseQRankSum=-4.596;DP=300;FS=20.154;HRun=1;HaplotypeScore=60.2813;InbreedingCoeff=0.5084;MQ=59.87;MQ0=9;MQRankSum=-0.467;QD=25.58;ReadPosRankSum=3.536;VQSLOD=3.4346;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,7:13:12.04:171,12,0	./.	0/0:16,0:5:3.12:0,3,76	0/0:28,0:9:10.22:0,10,126	0/0:1,9:12:0.88:0,1,2	1/1:0,10:10:15.05:240,15,0	1/1:1,5:6:9.03:144,9,0	1/1:4,26:26:75.21:1155,75,0	1/1:0,4:4:6.02:96,6,0	1/1:0,7:7:21.07:335,21,0	1/1:1,11:12:24.08:383,24,0	1/1:0,5:5:3.01:48,3,0	1/1:1,6:7:7.10:127,7,0	1/1:0,3:3:3.01:39,3,0	1/1:0,8:7:6.02:95,6,0	1/1:1,11:10:15.05:239,15,0	1/1:0,21:16:30.10:470,30,0	1/1:3,15:15:27.09:406,27,0	1/1:1,7:8:21.07:321,21,0	0/0:0,4:4:0.87:0,1,2	1/1:0,9:9:3.01:48,3,0	1/1:0,5:5:6.02:78,6,0	1/1:0,6:5:12.04:192,12,0	1/1:0,10:10:12.04:192,12,0	1/1:0,8:7:10.82:174,11,0	1/1:0,19:18:51.16:788,51,0	1/1:1,4:4:8.57:61,9,0	1/1:4,7:11:18.06:285,18,0
chr10	83650564	.	A	AAT	1733.95	PASS	AB=0.813;AC=19;AF=0.380;AN=50;BaseQRankSum=-2.442;DP=306;FS=10.608;HRun=0;HaplotypeScore=83.7512;InbreedingCoeff=0.5867;MQ=61.94;MQ0=8;MQRankSum=-3.828;QD=11.96;ReadPosRankSum=-5.650;VQSLOD=1.1609;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:13,1:14:11.99:0,12,122	./.	1/1:17,0:6:3:28,3,0	0/1:29,0:9:0.63:1,0,69	1/1:7,8:15:21.01:228,21,0	0/0:10,0:10:15.05:0,15,185	0/0:5,0:5:6.02:0,6,74	0/1:22,11:30:25.73:597,0,26	./.	0/0:8,0:8:18.02:0,18,205	0/0:11,0:11:24.03:0,24,278	./.	1/1:2,4:8:12.04:167,12,0	0/0:2,0:2:0.47:0,0,1	0/0:8,0:7:3.01:0,3,37	0/0:13,0:11:18.01:0,18,194	0/0:21,0:16:18.48:0,18,196	0/0:16,0:13:21.04:0,21,244	1/1:3,5:7:15.05:243,15,0	1/1:1,4:5:15.05:179,15,0	1/1:5,3:8:6.02:83,6,0	1/1:3,2:5:3.01:34,3,0	0/0:6,0:5:12.02:0,12,135	0/0:10,0:10:9.03:0,9,110	0/1:6,5:10:15.86:219,0,16	0/0:19,0:18:36.11:0,36,438	1/1:2,2:5:6.69:126,7,0	0/0:9,0:9:15.04:0,15,179
chr10	83650775	.	A	AT	1271.56	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=14.270;DP=351;FS=16.568;HRun=0;HaplotypeScore=98.7077;InbreedingCoeff=0.9085;MQ=49.94;MQ0=2;MQRankSum=-13.471;QD=10.25;ReadPosRankSum=-3.143;VQSLOD=2.1659;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:46.91:228,47,0	0/0:6,0:6:14.94:0,15,210	0/0:20,0:12:12.10:0,12,365	0/0:12,0:9:27.08:0,27,359	1/1:0,8:8:4.49:18,4,0	0/0:15,0:15:45.15:0,45,629	1/1:2,9:11:25.08:145,25,0	1/1:0,10:10:29.11:175,29,0	0/0:19,0:19:57.19:0,57,794	0/0:13,0:13:39.12:0,39,519	0/0:11,0:11:27.08:0,27,363	0/0:19,0:19:57.19:0,57,797	1/1:0,6:6:16.40:73,16,0	1/1:0,4:4:10.11:39,10,0	0/0:25,0:25:75.25:0,75,1049	0/0:13,0:13:39.12:0,39,530	0/0:17,0:17:48.16:0,48,671	0/0:31,0:31:93.27:0,93,1279	1/1:0,8:7:20.75:140,21,0	1/1:0,6:6:8.22:36,8,0	1/1:0,4:4:5.12:22,5,0	1/1:0,5:5:10.70:44,11,0	0/0:8,0:8:24.08:0,24,336	0/0:18,0:18:54.18:0,54,755	1/1:0,8:8:16.52:73,17,0	1/1:0,17:17:49.44:280,49,0	1/1:1,14:15:39.53:201,40,0	1/1:0,2:2:2.94:18,3,0
chr10	83651759	.	AAAAT	A	791.56	PASS	AB=0.908;AC=21;AF=0.583;AN=36;BaseQRankSum=4.819;DP=262;FS=4.086;HRun=0;HaplotypeScore=51.6269;InbreedingCoeff=0.3755;MQ=50.10;MQ0=18;MQRankSum=-2.253;QD=5.17;ReadPosRankSum=-0.112;VQSLOD=1.2206;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:12:9:78,9,0	./.	./.	./.	0/1:15,0:17:0:0,0,0	0/1:9,1:10:30.60:31,0,238	./.	./.	0/0:7,0:7:3.01:0,3,70	0/0:4,0:6:6.02:0,6,105	0/0:5,0:5:6:0,6,65	1/1:5,2:7:6.02:92,6,0	1/1:2,0:3:3:28,3,0	1/1:7,0:10:6.01:56,6,0	0/0:7,0:7:3.01:0,3,70	1/1:7,0:7:6.02:90,6,0	0/1:22,1:23:21.57:22,0,396	1/1:12,12:24:17.82:270,18,0	./.	./.	./.	./.	./.	0/0:6,0:6:6.02:0,6,139	1/1:6,0:12:6.01:56,6,0	1/1:12,0:12:12.01:112,12,0	0/0:11,0:10:0:0,0,0	1/1:14,0:13:9.01:84,9,0
chr10	83651760	.	AAATAAATAAAT	A	1592.14	PASS	AB=0.809;AC=12;AF=0.240;AN=50;BaseQRankSum=-1.259;DP=259;FS=0.000;HRun=0;HaplotypeScore=78.6820;InbreedingCoeff=0.4576;MQ=50.39;MQ0=17;MQRankSum=-7.854;QD=17.89;ReadPosRankSum=-2.167;VQSLOD=1.7335;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:1,0:12:8.77:9,0,35	0/0:3,0:3:9.03:0,9,307	./.	./.	0/0:18,0:17:45.02:0,45,460	0/0:11,0:11:33.10:0,33,1040	./.	1/1:23,0:23:7.33:481,7,0	0/0:7,0:7:18.04:0,18,323	0/0:6,0:6:15.04:0,15,431	0/0:4,0:4:9.02:0,9,265	0/0:7,0:7:14.99:0,15,225	0/1:2,0:2:2.68:3,0,25	0/0:10,0:10:3.73:0,4,137	0/0:7,0:7:15.03:0,15,292	0/0:7,0:7:21.05:0,21,293	0/0:24,0:24:69.20:0,69,1862	0/0:23,0:23:45.60:0,46,893	1/1:16,0:12:27.02:303,27,0	1/1:5,0:5:9.03:112,9,0	0/0:3,0:2:6.01:0,6,61	0/0:3,0:3:9.02:0,9,92	0/0:2,0:2:6.01:0,6,61	0/1:6,0:6:2.81:3,0,414	0/0:12,0:12:0.60:0,1,106	0/1:6,4:10:9.54:475,0,10	0/0:2,0:10:0.35:0,0,0	1/1:3,11:13:12.04:354,12,0
chr10	83653251	.	G	GAA	4953.21	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-10.018;DP=660;FS=2.420;HRun=3;HaplotypeScore=86.2559;InbreedingCoeff=0.9768;MQ=64.35;MQ0=5;MQRankSum=1.208;QD=45.03;ReadPosRankSum=1.240;VQSLOD=4.3946;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,1973	0/0:3,0:3:6.02:0,6,84	0/0:47,0:27:52.16:0,52,651	0/0:59,0:35:17.39:0,17,570	1/1:1,10:11:30.10:548,30,0	0/0:22,0:22:66.18:0,66,886	0/0:13,0:13:33.09:0,33,442	0/0:22,0:22:51.17:0,51,713	0/0:25,0:25:75.25:0,75,1047	0/0:19,0:19:54.18:0,54,754	0/0:13,0:13:33.11:0,33,461	0/0:26,0:26:69.23:0,69,965	1/1:0,23:23:63.22:1153,63,0	1/1:0,17:18:45.15:825,45,0	0/0:26,0:26:75.25:0,75,1050	0/0:20,0:20:54.18:0,54,755	0/0:29,0:29:81.25:0,81,1113	0/0:31,0:31:72.54:0,73,1193	0/0:28,0:27:78.99:0,79,1080	0/0:15,0:15:45.15:0,45,630	1/1:0,20:20:48.16:880,48,0	1/1:1,21:22:57.15:1007,57,0	0/0:14,0:14:36.12:0,36,495	0/0:21,0:21:63.18:0,63,845	1/1:2,14:16:30.10:539,30,0	0/0:20,0:20:57.19:0,57,798	0/0:26,0:26:72.18:0,72,967	0/0:15,0:15:42.04:0,42,566
chr10	83654721	.	ATG	A	2673.40	PASS	AB=0.834;AC=35;AF=0.673;AN=52;BaseQRankSum=5.869;DP=579;FS=1.973;HRun=0;HaplotypeScore=106.3271;InbreedingCoeff=0.5592;MQ=63.32;MQ0=12;MQRankSum=-1.353;QD=6.80;ReadPosRankSum=0.432;VQSLOD=3.3768;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:16:11.36:56,11,0	1/1:5,6:9:8.90:99,9,0	./.	./.	1/1:10,0:18:11.20:56,11,0	0/1:11,1:10:11.98:12,0,249	1/1:24,6:30:35.60:326,36,0	0/0:17,0:17:7.56:0,8,67	0/0:21,0:21:29.31:0,29,411	1/1:13,7:20:23.90:245,24,0	1/1:5,2:9:11.70:94,12,0	0/0:26,0:26:17.08:0,17,494	1/1:13,0:24:31.25:154,31,0	1/1:11,0:18:14.29:73,14,0	1/1:13,0:22:25.57:126,26,0	1/1:14,9:25:19.74:192,20,0	0/1:23,19:43:52.65:494,0,53	1/1:11,10:22:32.92:343,33,0	1/1:20,1:17:3.01:33,3,0	0/0:14,0:19:6:0,6,69	0/0:19,0:19:0:0,0,0	1/1:12,0:17:8.52:42,9,0	0/0:13,0:13:14.81:0,15,204	0/1:33,4:37:99:101,0,462	1/1:9,0:14:2.84:14,3,0	1/1:12,10:21:32.92:345,33,0	0/0:20,0:23:21.02:0,21,235	1/1:6,0:7:5.85:47,6,0
chr10	83654865	.	TAGAGACAC	T	956.58	PASS	AB=0.569;AC=8;AF=0.148;AN=54;BaseQRankSum=-0.699;DP=786;FS=6.024;HRun=0;HaplotypeScore=184.0511;InbreedingCoeff=0.7071;MQ=56.65;MQ0=12;MQRankSum=0.546;QD=7.84;ReadPosRankSum=-0.851;VQSLOD=2.1927;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:84.19:0,84,2450	0/0:7,0:7:15.05:0,15,534	0/0:53,0:15:26.61:0,27,272	0/0:45,0:10:3.48:0,3,63	1/1:6,16:22:2.69:54,3,0	0/0:19,0:18:42.09:0,42,949	0/0:33,0:30:56.61:0,57,1289	0/0:12,0:26:8.84:0,9,56	0/0:23,0:23:54.13:0,54,1512	0/0:34,0:33:66.07:0,66,1806	0/0:20,0:20:42.11:0,42,1024	0/0:35,0:35:78.21:0,78,2325	1/1:1,13:14:6.02:144,6,0	0/1:5,14:18:0:0,0,0	0/0:34,0:34:54.15:0,54,1737	0/0:24,0:24:54.19:0,54,1724	0/0:41,0:41:41.19:0,41,1569	0/0:30,0:30:57.14:0,57,1821	0/0:1,0:19:25.45:0,25,125	0/0:3,0:15:3:0,3,26	1/1:40,0:36:47.78:880,48,0	0/1:6,21:27:0:0,0,1	0/0:20,0:19:30.03:0,30,591	0/0:57,0:56:82.80:0,83,2418	./.	0/0:28,0:27:53.99:0,54,1325	0/0:10,0:10:18.01:0,18,202	0/0:21,0:20:42.14:0,42,1432
chr10	83655998	.	T	TC	2942.13	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-8.341;DP=722;FS=0.000;HRun=4;HaplotypeScore=73.0379;InbreedingCoeff=0.9815;MQ=95.77;MQ0=0;MQRankSum=-3.072;QD=31.30;ReadPosRankSum=-2.356;VQSLOD=3.0143;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,144,1614	0/0:8,0:8:18.02:0,18,192	0/0:34,0:34:81.07:0,81,873	0/0:34,0:34:80.25:0,80,901	0/0:21,0:21:52.02:0,52,588	0/0:14,0:14:29.99:0,30,311	0/0:25,0:25:72.19:0,72,806	1/1:4,29:33:87.25:1139,87,0	0/0:23,0:23:66.17:0,66,739	0/0:30,0:30:84.22:0,84,930	0/0:20,0:20:54.13:0,54,600	0/0:26,0:26:78.21:0,78,876	0/0:30,0:30:86.89:0,87,943	0/0:21,0:21:63.16:0,63,705	0/0:36,0:36:99:0,99,1123	0/0:37,0:37:99:0,111,1249	0/0:43,0:43:99:0,123,1394	0/0:22,0:22:63.11:0,63,680	1/1:1,14:15:42.14:574,42,0	1/1:3,17:20:39.13:528,39,0	0/0:45,0:45:99:0,130,1435	0/0:21,0:21:54.11:0,54,598	0/0:11,0:11:33.09:0,33,374	0/0:24,0:24:72.21:0,72,816	0/0:19,0:19:48.13:0,48,543	0/0:29,0:29:81.22:0,81,911	1/1:1,25:26:63.20:861,63,0	0/0:4,0:4:9.02:0,9,102
chr10	83657195	.	A	AC	5464.27	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-7.307;DP=552;FS=3.111;HRun=8;HaplotypeScore=63.5788;InbreedingCoeff=0.9263;MQ=84.08;MQ0=0;MQRankSum=0.560;QD=18.52;ReadPosRankSum=-1.117;VQSLOD=4.4944;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:8,40:49:71.65:1060,72,0	1/1:4,8:12:15.02:173,15,0	0/0:23,0:23:46.09:0,46,375	0/1:18,0:17:4.71:5,0,171	0/0:21,0:21:54.01:0,54,489	0/0:22,0:22:57.02:0,57,521	1/1:9,16:25:30.09:346,30,0	1/1:10,4:18:23.40:196,23,0	0/0:20,0:20:57.03:0,57,521	1/1:4,17:21:51.13:576,51,0	1/1:4,12:16:39.11:442,39,0	0/0:19,0:19:44.24:0,44,391	0/0:9,0:9:24.01:0,24,219	0/0:16,0:16:36:0,36,329	1/1:6,12:18:5.63:319,6,0	1/1:0,12:12:36.11:415,36,0	1/1:1,21:22:35.74:665,36,0	0/0:19,0:19:54.03:0,54,494	1/1:6,2:16:26.20:196,26,0	1/1:3,0:17:20.01:106,20,0	0/0:22,0:22:57.02:0,57,522	0/0:20,0:20:54.01:0,54,490	0/0:23,0:23:63.03:0,63,576	0/0:26,0:28:76.07:0,76,660	0/0:15,0:15:45.02:0,45,411	1/1:5,16:21:45.13:519,45,0	1/1:3,3:21:37.42:239,37,0	1/1:2,7:9:18.05:208,18,0
chr10	83658030	.	GT	G	1065.22	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.300;DP=487;FS=0.000;HRun=12;HaplotypeScore=56.0428;InbreedingCoeff=0.8263;MQ=76.88;MQ0=1;MQRankSum=-0.248;QD=11.97;ReadPosRankSum=-0.885;VQSLOD=2.8984;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,1:39:84.95:0,85,1024	0/0:4,0:7:15.75:0,16,138	0/0:20,0:16:20.59:0,21,193	0/0:9,0:7:11.61:0,12,96	0/0:21,0:21:39.07:0,39,390	0/0:12,1:13:4.71:0,5,222	0/0:11,0:11:4.51:0,5,132	1/1:14,18:33:55.71:416,56,0	0/0:11,1:12:0.80:0,1,183	0/0:16,0:16:42.06:0,42,409	0/0:17,1:18:18.81:0,19,350	0/0:20,1:21:33.86:0,34,512	0/0:19,0:19:42.05:0,42,412	0/0:18,0:18:42.07:0,42,420	0/0:12,0:12:29.94:0,30,274	0/0:16,0:16:13.05:0,13,295	0/0:30,0:30:72.05:0,72,703	0/0:23,0:23:58.25:0,58,553	1/1:8,13:21:35.78:274,36,0	1/1:5,7:16:32.04:209,32,0	0/0:13,0:13:27.04:0,27,267	0/0:3,0:3:6:0,6,54	0/0:17,0:17:39.07:0,39,390	0/0:12,0:12:24.05:0,24,244	0/0:20,0:20:54.10:0,54,543	0/0:17,0:18:32.90:0,33,319	1/1:2,17:19:42.70:324,43,0	0/0:9,0:9:18.04:0,18,182
chr10	83658745	.	C	CT	907.08	PASS	AB=0.957;AC=26;AF=0.464;AN=56;BaseQRankSum=1.804;DP=477;FS=1.739;HRun=12;HaplotypeScore=86.3316;InbreedingCoeff=0.2042;MQ=64.85;MQ0=6;MQRankSum=-0.351;QD=3.19;ReadPosRankSum=-1.756;VQSLOD=0.2328;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,23:32:4.74:199,0,5	0/1:8,0:8:11.40:11,0,45	0/0:49,0:13:1.35:0,1,46	0/1:30,0:11:9.95:10,0,32	1/1:24,0:22:23.68:172,24,0	0/1:15,0:15:47.89:48,0,114	0/1:16,0:16:28.04:28,0,62	0/0:25,0:25:14.84:0,15,84	0/0:10,0:10:15.34:0,15,109	0/1:17,0:17:11.59:12,0,57	0/1:19,0:20:19.37:19,0,33	0/0:16,1:17:1.66:0,2,150	1/1:6,0:6:9.11:51,9,0	1/1:9,0:9:14.30:96,14,0	0/1:13,0:13:2.94:3,0,32	0/1:9,0:9:20.66:24,0,21	0/1:28,0:27:42.23:42,0,62	0/0:21,0:22:39.97:0,40,275	0/0:13,0:14:8.69:0,9,69	0/0:11,0:12:4.30:0,4,58	1/1:12,0:12:14.63:84,15,0	1/1:9,0:9:13.04:83,13,0	0/0:15,0:15:17.91:0,18,150	0/0:7,0:7:14.68:0,15,94	1/1:10,0:9:13.53:63,14,0	1/1:21,1:20:20.82:122,21,0	0/0:21,0:21:28.81:0,29,173	1/1:4,0:4:2.98:21,3,0
chr10	83658757	.	T	TG	2066.67	PASS	AB=0.964;AC=33;AF=0.589;AN=56;BaseQRankSum=-0.535;DP=448;FS=3.996;HRun=10;HaplotypeScore=87.6379;InbreedingCoeff=0.3458;MQ=67.58;MQ0=6;MQRankSum=-0.890;QD=6.87;ReadPosRankSum=0.062;VQSLOD=2.0187;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:15.45:15,0,25	1/1:5,2:7:11.96:106,12,0	0/0:54,0:19:18.37:0,18,161	0/1:29,0:10:13.82:17,0,14	0/1:17,1:20:11.88:206,0,12	0/0:15,0:15:19.11:0,19,161	1/1:12,6:18:0.25:75,0,0	0/1:20,0:20:9.41:98,0,9	0/0:10,0:10:8.03:0,8,148	1/1:13,5:18:4.84:175,5,0	1/1:11,9:20:15.77:240,16,0	0/0:13,0:14:25.26:0,25,234	1/1:5,1:6:14.67:95,15,0	1/1:6,0:8:11.97:100,12,0	1/1:6,9:15:16.30:128,16,0	1/1:8,3:11:0.89:145,1,0	1/1:8,12:19:23.27:271,23,0	0/0:21,0:21:21.38:0,21,264	1/1:10,0:10:1.13:74,1,0	0/1:10,0:10:20.38:31,0,20	0/0:6,0:6:8.73:0,9,51	1/1:10,1:11:11.72:82,12,0	0/0:17,0:17:29.70:0,30,219	0/0:7,0:8:13.97:0,14,99	1/1:7,1:10:4.57:134,5,0	0/1:13,0:13:0.67:101,0,1	0/1:21,0:21:27.63:130,0,28	1/1:1,0:3:4.54:27,5,0
chr10	83658796	.	CT	C	729.88	PASS	AB=0.884;AC=34;AF=0.630;AN=54;BaseQRankSum=-0.810;DP=356;FS=4.463;HRun=17;HaplotypeScore=78.9629;InbreedingCoeff=0.3243;MQ=53.22;MQ0=18;MQRankSum=1.044;QD=2.67;ReadPosRankSum=3.082;VQSLOD=-0.4247;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,6:22:22.06:129,22,0	1/1:1,3:3:5.82:33,6,0	0/1:16,0:8:7.81:8,0,32	0/1:5,0:3:6.72:7,0,10	1/1:13,0:21:5.09:32,5,0	0/1:10,3:14:29.74:30,0,80	0/1:13,1:15:0.18:0,0,122	0/0:9,0:13:15.68:0,16,82	0/1:11,1:12:24.29:24,0,42	1/1:7,4:12:10.65:56,11,0	1/1:11,6:20:3.10:131,3,0	0/0:16,1:17:16.72:0,17,201	1/1:5,0:8:12.61:35,13,0	1/1:3,0:7:10.26:30,10,0	1/1:10,2:13:16.18:88,16,0	1/1:8,2:11:11.55:59,12,0	0/1:13,5:18:8.31:58,0,8	0/1:13,2:14:5.89:6,0,131	0/0:10,0:12:17.55:0,18,108	0/0:9,0:10:26.12:0,26,157	1/1:2,0:2:2.03:6,2,0	1/1:4,0:12:12.52:37,13,0	0/1:14,2:17:33.88:34,0,62	0/0:6,0:5:2.99:0,3,24	1/1:6,0:8:7.29:21,7,0	1/1:7,3:12:17.36:83,17,0	0/0:13,1:20:19.82:0,20,168	./.
chr10	83660293	.	G	GTT	4124.45	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=1.118;DP=552;FS=3.179;HRun=9;HaplotypeScore=115.8551;InbreedingCoeff=0.9561;MQ=68.29;MQ0=13;MQRankSum=-2.536;QD=23.17;ReadPosRankSum=1.044;VQSLOD=2.8975;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,15:19:49.02:686,49,0	1/1:0,4:4:12.04:185,12,0	0/0:49,0:19:22.40:0,22,153	0/0:54,0:18:21.71:0,22,158	0/0:16,0:16:27.05:0,27,287	0/0:17,0:17:36:0,36,373	1/1:7,8:14:32.44:400,32,0	0/0:20,0:20:29.23:0,29,331	0/0:7,0:7:7.65:0,8,146	1/1:12,7:19:38.34:550,38,0	1/1:5,5:11:29.89:350,30,0	0/0:15,0:15:36.06:0,36,380	0/0:8,0:8:18.03:0,18,189	0/0:11,0:11:24.06:0,24,251	1/1:7,5:12:36.07:461,36,0	1/1:9,5:14:24.06:336,24,0	1/1:22,12:34:69.19:985,69,0	0/0:28,0:26:62.29:0,62,630	0/0:32,0:29:57.10:0,57,589	0/0:16,0:16:39.08:0,39,407	1/1:10,0:13:5.10:54,5,0	0/0:15,0:15:33.06:0,33,349	0/0:18,0:18:51.11:0,51,531	0/0:29,0:29:63.08:0,63,657	0/0:10,0:10:14.86:0,15,159	1/1:11,0:17:19.84:68,20,0	0/0:21,0:20:15.27:0,15,269	1/1:0,0:10:14.85:51,15,0
chr10	83660318	.	TG	T	4453.12	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=8.321;DP=652;FS=4.790;HRun=5;HaplotypeScore=95.0890;InbreedingCoeff=0.9450;MQ=45.72;MQ0=86;MQRankSum=-4.522;QD=14.00;ReadPosRankSum=-2.309;VQSLOD=3.8231;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:25:50.85:403,51,0	1/1:3,0:3:8.98:72,9,0	0/0:107,0:13:15.72:0,16,117	0/0:121,0:15:24.01:0,24,159	1/1:21,0:20:50.60:366,51,0	0/0:19,0:17:31.31:0,31,354	1/1:19,0:18:32.35:220,32,0	1/1:16,0:15:30.41:215,30,0	0/0:8,0:8:11.97:0,12,132	1/1:27,0:23:46.51:346,47,0	1/1:10,0:10:29.77:229,30,0	0/0:16,0:15:44.88:0,45,499	1/1:7,0:7:20.74:141,21,0	1/1:13,0:13:26.65:180,27,0	1/1:9,1:8:17.96:153,18,0	1/1:13,1:13:29.93:247,30,0	1/1:29,0:28:71.36:547,71,0	0/0:28,0:27:76.94:0,77,847	1/1:22,0:18:28.60:230,29,0	1/1:15,0:15:30.04:182,30,0	1/1:3,5:6:9.02:95,9,0	1/1:12,0:12:29.70:211,30,0	0/0:15,0:15:29.16:0,29,275	0/0:18,0:18:54.12:0,54,656	1/1:13,0:13:23.77:172,24,0	1/1:16,0:14:35.77:271,36,0	1/1:24,0:23:5.34:80,5,0	1/1:6,0:6:11.96:93,12,0
chr10	83660322	.	GGT	G	5387.75	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=5.833;DP=639;FS=1.391;HRun=0;HaplotypeScore=93.1399;InbreedingCoeff=0.6426;MQ=44.64;MQ0=90;MQRankSum=-4.097;QD=17.10;ReadPosRankSum=-2.860;VQSLOD=3.8631;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,1:21:53.67:493,54,0	1/1:2,2:4:11.99:133,12,0	0/0:103,0:11:12.90:0,13,119	0/0:119,0:15:15.87:0,16,160	1/1:0,0:20:50.94:455,51,0	0/0:16,0:14:33.02:0,33,499	1/1:4,12:18:33.01:366,33,0	0/1:13,0:14:5.66:171,0,6	0/0:7,0:7:12.04:0,12,200	1/1:9,9:23:1.79:472,2,0	1/1:3,5:10:28.97:289,29,0	0/0:17,0:16:47.84:0,48,750	1/1:0,0:7:20.99:183,21,0	1/1:0,0:12:26.93:226,27,0	1/1:3,6:8:17.05:186,17,0	1/1:2,9:13:29.66:394,30,0	1/1:9,18:29:70.70:791,71,0	0/0:29,0:27:80.96:0,81,1194	0/1:18,0:16:24.37:153,0,24	0/1:9,0:15:15.58:106,0,16	1/1:9,0:7:6.38:37,6,0	1/1:0,0:10:29.74:244,30,0	0/0:14,0:15:28.81:0,29,406	0/0:18,0:18:54.17:0,54,946	1/1:1,0:15:24:220,24,0	1/1:3,1:14:36.87:332,37,0	0/1:7,0:23:29.86:30,0,67	1/1:4,0:6:11.99:105,12,0
chr10	83660323	.	GT	G	890.28	PASS	AB=0.898;AC=32;AF=0.571;AN=56;BaseQRankSum=9.440;DP=644;FS=6.502;HRun=14;HaplotypeScore=103.1824;InbreedingCoeff=0.7440;MQ=44.51;MQ0=90;MQRankSum=-5.438;QD=3.51;ReadPosRankSum=-0.667;VQSLOD=1.0416;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:21:26.44:87,26,0	1/1:5,0:5:11:52,11,0	0/0:101,1:11:2.99:0,3,24	0/0:116,1:15:7.53:0,8,40	1/1:21,0:20:30.73:94,31,0	0/0:14,2:14:3.45:0,3,174	1/1:19,0:18:20.76:100,21,0	0/0:17,0:16:17.04:0,17,96	0/0:8,0:9:14.85:0,15,116	0/1:25,0:22:10.32:77,0,10	1/1:10,0:10:15.61:69,16,0	0/0:18,0:17:41.74:0,42,356	1/1:7,0:7:14.26:43,14,0	1/1:12,0:12:16.77:50,17,0	1/1:10,0:8:10.53:42,11,0	1/1:14,0:13:21:88,21,0	1/1:30,0:29:39.19:160,39,0	0/0:26,2:27:21.36:0,21,453	0/0:24,0:17:18.57:0,19,107	0/0:14,0:15:19.86:0,20,101	1/1:10,0:8:8.56:43,9,0	1/1:10,0:10:12.83:39,13,0	0/1:12,2:15:21.13:21,0,128	0/0:17,0:18:50.60:0,51,424	1/1:15,0:15:16.48:50,16,0	1/1:16,0:14:22.18:70,22,0	0/0:21,0:21:23.12:0,23,139	1/1:6,0:6:4.43:14,4,0
chr10	83660439	.	G	GGCAT	621.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.456;DP=537;FS=1.262;HRun=0;HaplotypeScore=98.9392;InbreedingCoeff=0.9734;MQ=73.56;MQ0=1;MQRankSum=-1.713;QD=23.01;ReadPosRankSum=0.381;VQSLOD=3.1888;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:99:0,135,2367	0/0:9,0:9:24.08:0,24,417	0/0:20,0:19:54.05:0,54,850	0/0:14,0:12:33.11:0,33,567	0/0:17,0:16:39.13:0,39,717	0/0:12,0:12:36.12:0,36,661	0/0:32,0:32:84.27:0,84,1486	0/0:17,0:16:42.14:0,42,771	0/0:20,0:20:48.14:0,48,822	0/0:17,0:17:45.14:0,45,789	0/0:20,0:20:44.98:0,45,767	0/0:24,0:24:69.21:0,69,1214	0/0:17,0:17:45.14:0,45,783	0/0:22,0:22:48.16:0,48,882	0/0:11,0:10:27.09:0,27,497	0/0:15,0:15:39.12:0,39,674	0/0:41,0:41:99:0,111,2000	0/0:27,0:27:75.21:0,75,1329	0/0:10,0:10:21.07:0,21,373	0/0:12,0:12:33.07:0,33,560	1/1:13,14:24:29.96:716,30,0	0/0:19,0:19:51.17:0,51,908	0/0:13,0:13:39.12:0,39,687	0/0:26,0:26:75.26:0,75,1380	0/0:7,0:7:15.05:0,15,276	0/0:22,0:22:57.20:0,57,1026	0/0:9,0:9:24.05:0,24,408	0/0:10,0:10:27.09:0,27,497
chr10	83660470	.	G	GTGC	4217.84	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-5.868;DP=578;FS=1.615;HRun=0;HaplotypeScore=87.7917;InbreedingCoeff=0.9891;MQ=87.31;MQ0=0;MQRankSum=-3.026;QD=32.95;ReadPosRankSum=1.152;VQSLOD=5.4121;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:99:0,108,1571	0/0:12,0:12:27.09:0,27,397	0/0:22,0:23:29.88:0,30,420	0/0:24,0:24:38.34:0,38,529	1/1:5,10:15:15.05:310,15,0	0/0:15,0:15:42.13:0,42,599	0/0:31,0:31:72.24:0,72,1056	0/0:20,0:20:42.13:0,42,595	0/0:18,0:18:48.16:0,48,704	0/0:13,0:13:33.11:0,33,485	0/0:22,0:22:42.01:0,42,615	0/0:25,0:25:66.22:0,66,970	1/1:6,15:21:45.15:929,45,0	1/1:6,21:30:54.19:1115,54,0	0/0:12,0:11:33.11:0,33,486	0/0:20,0:20:60.19:0,60,863	0/0:42,0:42:99:0,99,1414	0/0:26,0:26:72.24:0,72,1060	0/0:9,0:9:18.06:0,18,262	0/0:10,0:10:30.10:0,30,440	1/1:13,25:37:54.19:1118,54,0	1/1:9,6:15:15.05:311,15,0	0/0:12,0:12:27.09:0,27,396	0/0:30,0:30:72.24:0,72,1057	1/1:0,7:7:21.07:435,21,0	0/0:26,0:26:60.19:0,60,865	0/0:9,0:9:24.07:0,24,333	0/0:11,0:11:21.07:0,21,309
chr10	83662452	.	CGTGT	C	8513.44	PASS	AB=0.995;AC=32;AF=0.571;AN=56;BaseQRankSum=0.064;DP=639;FS=1.946;HRun=0;HaplotypeScore=157.7425;InbreedingCoeff=0.4474;MQ=68.34;MQ0=6;MQRankSum=-1.877;QD=19.48;ReadPosRankSum=2.085;VQSLOD=4.8448;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:31:99:372,0,123	0/1:7,0:7:0.09:73,0,0	0/0:32,0:23:44.76:0,45,511	0/0:33,0:25:51.13:0,51,692	1/1:18,6:23:36.74:362,37,0	0/0:26,0:26:75.21:0,75,1515	0/1:25,0:26:58.28:315,0,58	1/1:31,0:31:47.84:532,48,0	0/0:14,0:14:42.11:0,42,778	0/1:24,0:24:99:561,0,146	0/1:13,0:13:33.72:228,0,34	0/0:28,0:28:75.13:0,75,1284	1/1:7,10:18:50.91:616,51,0	1/1:12,9:21:50.64:595,51,0	0/1:25,0:25:34.33:287,0,34	0/1:22,0:22:99:195,0,116	0/1:27,0:27:31.98:428,0,32	0/0:19,0:19:51.14:0,51,909	1/1:17,3:19:38.90:452,39,0	1/1:12,8:20:48.02:633,48,0	1/1:36,4:40:50.98:614,51,0	1/1:14,12:26:39.05:483,39,0	0/0:15,0:16:41.92:0,42,699	0/0:33,0:34:83.03:0,83,1372	1/1:5,9:14:36.08:474,36,0	1/1:4,23:27:63.04:868,63,0	1/1:12,2:14:23.63:238,24,0	1/1:4,1:5:14.95:188,15,0
chr10	83662466	.	CGTGCGTGCGT	C	6537.71	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=4.843;DP=671;FS=11.326;HRun=0;HaplotypeScore=252.6585;InbreedingCoeff=0.5703;MQ=56.54;MQ0=11;MQRankSum=-5.465;QD=22.47;ReadPosRankSum=-2.285;VQSLOD=2.4711;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:39:21.57:22,0,1388	0/0:6,0:6:5.81:0,6,145	0/0:22,0:12:8.58:0,9,229	0/0:26,0:18:7.77:0,8,467	1/1:26,0:24:30.09:724,30,0	0/0:28,0:28:81.11:0,81,2769	0/0:25,0:25:32.60:0,33,973	0/1:27,0:26:99:166,0,163	0/0:20,0:20:48.09:0,48,1680	0/0:25,0:25:0.99:0,1,1014	0/0:16,0:15:30.73:0,31,804	0/0:26,0:26:69.22:0,69,2403	1/1:20,0:20:54.11:1142,54,0	1/1:22,0:22:45.12:967,45,0	0/0:25,0:25:44.67:0,45,1362	0/0:22,0:22:30.38:0,30,1275	0/0:28,0:28:40.40:0,40,1208	0/0:22,0:22:43.16:0,43,1662	0/1:23,0:21:99:334,0,145	0/1:23,0:23:48.53:549,0,49	1/1:51,0:48:32.05:682,32,0	1/1:17,14:31:29.86:978,30,0	0/0:18,0:18:48.12:0,48,1337	0/0:35,0:35:89.42:0,89,2485	1/1:17,0:17:42.13:841,42,0	0/0:29,0:29:24.86:0,25,1003	1/1:11,0:11:14.91:134,15,0	0/0:7,0:7:0.06:0,0,283
chr10	83662468	.	TGC	T	1058.95	PASS	AB=0.964;AC=14;AF=0.250;AN=56;BaseQRankSum=8.896;DP=669;FS=1.351;HRun=0;HaplotypeScore=181.1869;InbreedingCoeff=0.3767;MQ=55.53;MQ0=11;MQRankSum=-6.607;QD=3.73;ReadPosRankSum=0.130;VQSLOD=2.6788;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:38:52.93:53,0,702	0/0:7,0:7:8.75:0,9,78	0/0:22,0:12:15.73:0,16,279	0/0:23,0:15:36.62:0,37,522	0/1:24,0:22:5.20:86,0,5	0/0:28,0:28:84.28:0,84,1457	0/0:25,0:25:43.03:0,43,438	0/0:25,0:24:54.95:0,55,506	0/0:20,0:20:47.88:0,48,822	0/0:26,1:27:0.11:0,0,509	0/0:17,0:16:11.34:0,11,292	0/0:25,0:25:51.36:0,51,1200	1/1:22,0:21:26.97:219,27,0	1/1:24,0:24:30.40:198,30,0	0/1:26,1:27:20.75:21,0,429	0/1:20,2:22:27.72:28,0,419	0/1:25,3:28:23.51:24,0,497	0/0:22,0:22:40.09:0,40,974	0/0:22,0:20:41.83:0,42,400	0/0:23,0:23:17.46:0,17,194	0/1:51,0:48:18.98:293,0,19	1/1:31,0:31:15.70:131,16,0	0/0:18,0:18:30.29:0,30,663	0/0:34,0:34:90:0,90,1508	1/1:16,0:16:4.91:178,5,0	0/0:29,0:29:45.46:0,45,589	0/0:11,0:11:20.22:0,20,131	0/0:7,0:7:20.43:0,20,162
chr10	83662470	.	C	CGT	2222.10	PASS	AB=0.915;AC=17;AF=0.304;AN=56;BaseQRankSum=2.535;DP=680;FS=0.000;HRun=0;HaplotypeScore=186.9628;InbreedingCoeff=-0.0163;MQ=54.18;MQ0=13;MQRankSum=1.213;QD=5.85;ReadPosRankSum=-1.684;VQSLOD=3.0661;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:35,8:41:2.01:450,0,2	1/1:1,6:7:5.56:83,6,0	0/0:22,0:11:17.12:0,17,161	0/0:23,0:14:26.34:0,26,296	0/1:17,0:21:10.23:10,0,83	0/0:28,0:28:78.22:0,78,1049	0/1:14,10:24:60.94:70,0,61	0/0:28,0:27:35.59:0,36,322	0/0:19,0:19:48.11:0,48,633	0/1:28,2:30:90.40:244,0,90	0/1:16,3:18:56.54:165,0,57	0/0:23,0:23:64.07:0,64,841	0/0:15,0:21:20.14:0,20,120	0/1:17,0:25:0.79:1,0,72	0/1:19,9:28:8.47:453,0,8	0/1:16,6:22:29.52:346,0,30	1/1:19,8:27:13.13:475,13,0	0/0:25,0:24:50.63:0,51,710	0/1:20,0:18:2.62:3,0,255	0/0:22,0:22:19.45:0,19,95	0/1:50,0:49:24.56:25,0,104	0/0:17,0:30:31.30:0,31,164	0/0:19,0:19:44.34:0,44,560	0/0:34,0:34:87.07:0,87,1152	0/1:11,0:17:25.54:26,0,90	0/1:31,0:31:25.92:26,0,409	0/1:12,0:11:4.93:5,0,54	0/0:5,0:5:12.51:0,13,151
chr10	83662472	.	TGC	T	3969.52	PASS	AB=0.994;AC=30;AF=0.536;AN=56;BaseQRankSum=8.780;DP=673;FS=0.724;HRun=0;HaplotypeScore=169.3864;InbreedingCoeff=0.0877;MQ=53.75;MQ0=15;MQRankSum=-1.814;QD=7.84;ReadPosRankSum=-2.948;VQSLOD=3.1026;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:41:99:264,0,109	1/1:8,0:8:6.58:52,7,0	0/1:18,0:7:1.88:2,0,102	0/0:22,0:12:0.23:0,0,121	1/1:23,0:21:8.55:128,9,0	0/0:28,0:28:34.02:0,34,924	0/1:22,1:23:32.54:180,0,33	0/1:28,0:27:53.99:202,0,54	0/0:20,0:20:31.95:0,32,604	0/1:30,0:30:87.56:336,0,88	0/1:20,0:19:47.19:109,0,47	0/0:22,1:23:23.40:0,23,837	1/1:22,0:21:18.28:256,18,0	1/1:26,0:26:12.94:256,13,0	0/1:26,1:27:11.83:233,0,12	0/1:20,0:20:31.16:162,0,31	1/1:26,0:26:9.04:267,9,0	0/0:24,0:23:30.22:0,30,630	0/1:19,0:17:15.33:144,0,15	1/1:22,0:22:35.72:260,36,0	0/1:52,0:49:19.18:322,0,19	1/1:30,0:30:3.49:151,3,0	0/0:18,0:18:37.54:0,38,438	0/0:32,0:32:72.94:0,73,961	1/1:18,0:18:34.69:239,35,0	0/1:33,0:32:99:266,0,265	1/1:12,1:12:19.54:129,20,0	0/1:5,0:5:12.71:13,0,33
chr10	83662474	.	CGT	C	1832.81	PASS	AB=0.900;AC=26;AF=0.481;AN=54;BaseQRankSum=6.930;DP=673;FS=0.453;HRun=0;HaplotypeScore=176.7090;InbreedingCoeff=0.3191;MQ=53.16;MQ0=16;MQRankSum=-6.167;QD=4.19;ReadPosRankSum=-0.166;VQSLOD=2.9040;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:41:5.54:0,6,468	0/0:9,0:9:5.77:0,6,41	./.	0/0:23,0:13:5.99:0,6,53	1/1:17,7:22:11.01:211,11,0	0/1:23,4:27:74.11:74,0,645	0/1:22,0:22:2.27:2,0,173	0/1:20,0:32:9.34:170,0,9	0/1:18,1:19:10.59:11,0,384	0/0:28,0:29:35.77:0,36,388	0/0:20,0:19:32.55:0,33,329	0/0:24,0:25:30.46:0,30,633	1/1:16,4:19:13.52:202,14,0	1/1:21,4:25:11.26:233,11,0	0/0:27,0:27:18.68:0,19,308	0/0:20,0:20:19.72:0,20,307	0/0:23,0:23:18.75:0,19,246	0/1:23,1:23:0.78:1,0,393	1/1:11,1:16:17.54:130,18,0	1/1:8,0:20:20.32:113,20,0	0/1:41,11:49:12.22:221,0,12	1/1:28,1:30:16.11:277,16,0	0/1:18,1:19:7.25:7,0,295	0/1:33,1:34:0.71:1,0,627	1/1:12,6:18:21.48:207,21,0	0/1:31,3:33:61.88:62,0,354	1/1:7,4:12:9:86,9,0	0/1:4,1:5:5.76:6,0,59
chr10	83662927	.	C	CT	4567.85	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-11.723;DP=771;FS=7.537;HRun=2;HaplotypeScore=74.8647;InbreedingCoeff=1.0000;MQ=83.69;MQ0=0;MQRankSum=-0.540;QD=38.39;ReadPosRankSum=-2.502;VQSLOD=4.1968;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1402	0/0:18,0:18:54.12:0,54,621	0/0:16,0:16:48.13:0,48,565	0/0:28,0:28:45.47:0,45,674	0/0:30,0:30:87.24:0,87,1050	0/0:25,0:25:72.23:0,72,892	0/0:35,0:35:99:0,99,1215	1/1:5,42:46:99:1777,126,0	0/0:26,0:26:75.22:0,75,917	0/0:31,0:30:90.24:0,90,1098	0/0:21,0:21:63.19:0,63,768	0/0:29,0:29:84.24:0,84,1018	0/0:28,0:28:75.24:0,75,929	0/0:19,0:19:51.16:0,51,632	0/0:25,0:25:75.24:0,75,930	0/0:29,0:29:87.27:0,87,1078	0/0:35,0:35:96.24:0,96,1159	0/0:25,0:25:49.46:0,49,764	1/1:1,13:14:39.12:544,39,0	1/1:1,28:29:81.27:1166,81,0	0/0:39,0:39:99:0,114,1399	0/0:24,0:24:69.20:0,69,842	0/0:22,0:22:63.18:0,63,756	0/0:35,0:35:99:0,102,1247	0/0:32,0:32:93.27:0,93,1138	0/0:27,0:27:81.25:0,81,994	1/1:0,29:29:75.25:1080,75,0	0/0:14,0:14:39.12:0,39,483
chr10	83663012	.	GC	G	3826.53	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.372;DP=676;FS=6.680;HRun=1;HaplotypeScore=62.2942;InbreedingCoeff=0.9979;MQ=76.40;MQ0=0;MQRankSum=-0.379;QD=37.15;ReadPosRankSum=1.744;VQSLOD=4.0867;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1867	0/0:11,0:11:33.11:0,33,524	0/0:11,1:12:30.08:0,30,434	0/0:15,0:15:35.13:0,35,566	1/1:0,27:27:72.24:997,72,0	0/0:23,0:23:69.22:0,69,1075	0/0:31,0:31:93.32:0,93,1484	0/0:43,0:43:99:0,129,1974	0/0:21,0:21:63.21:0,63,1003	0/0:23,0:23:69.23:0,69,1083	0/0:12,0:12:36.12:0,36,572	0/0:28,0:28:84.29:0,84,1338	1/1:0,21:21:54.18:755,54,0	1/1:0,25:25:66.22:923,66,0	0/0:25,0:25:75.24:0,75,1174	0/0:24,0:24:72.25:0,72,1151	0/0:29,0:29:84.26:0,84,1306	0/0:38,0:38:99:0,114,1807	0/0:15,0:15:45.13:0,45,691	0/0:32,0:32:96.22:0,96,1500	0/0:17,0:17:51.15:0,51,763	1/1:0,16:16:45.11:607,45,0	0/0:24,0:24:72.22:0,72,1099	0/0:27,0:26:81.28:0,81,1292	1/1:0,14:14:39.13:545,39,0	0/0:40,0:40:99:0,117,1809	0/0:37,0:37:99:0,108,1663	0/0:6,0:6:18.06:0,18,279
chr10	83663467	.	TTGAA	T	4269.46	PASS	AB=0.950;AC=15;AF=0.268;AN=56;BaseQRankSum=7.531;DP=599;FS=2.580;HRun=0;HaplotypeScore=111.1047;InbreedingCoeff=0.9001;MQ=68.72;MQ0=0;MQRankSum=2.495;QD=27.72;ReadPosRankSum=2.390;VQSLOD=4.8496;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,102,2290	1/1:2,5:7:15.05:247,15,0	0/0:24,0:21:24.08:0,24,512	0/0:13,0:12:9.03:0,9,218	0/0:24,0:24:42.07:0,42,650	0/0:22,0:22:51.18:0,51,1201	1/1:5,13:18:27.09:444,27,0	0/0:35,0:35:81.27:0,81,1893	0/0:22,0:22:57.20:0,57,1380	1/1:3,14:17:42.12:644,42,0	1/1:3,12:15:33.07:511,33,0	0/0:30,1:31:25.94:0,26,1705	0/0:23,0:23:42.14:0,42,680	0/0:21,0:21:33.11:0,33,539	1/1:4,17:21:48.16:789,48,0	1/1:6,17:23:42.14:691,42,0	1/1:9,25:34:57.19:937,57,0	0/0:18,0:18:15.27:0,15,850	0/0:11,0:11:18.06:0,18,440	0/0:23,0:23:45.15:0,45,1093	0/0:28,0:28:60.19:0,60,1412	0/0:23,0:23:45.03:0,45,659	0/1:18,1:19:7.18:7,0,900	0/0:19,0:19:39.11:0,39,902	0/0:15,0:15:24.08:0,24,393	0/0:16,0:16:33.11:0,33,800	0/0:33,0:33:90.30:0,90,2126	0/0:4,0:4:12.04:0,12,293
chr10	83663480	.	T	TGAAC	4852.55	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-9.178;DP=620;FS=16.339;HRun=0;HaplotypeScore=115.6151;InbreedingCoeff=0.9927;MQ=67.30;MQ0=0;MQRankSum=0.136;QD=46.21;ReadPosRankSum=1.897;VQSLOD=4.2663;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,104,1903	0/0:6,0:6:15.04:0,15,163	0/0:26,0:22:51.09:0,51,656	0/0:13,0:12:16.90:0,17,276	1/1:1,22:23:59.52:1168,60,0	0/0:21,0:21:54.09:0,54,918	0/0:19,0:19:41.99:0,42,408	0/0:44,0:44:99:0,126,1826	0/0:25,0:25:72.16:0,72,1154	0/0:19,0:19:57.03:0,57,569	0/0:17,0:17:47.87:0,48,444	0/0:35,0:35:99:0,102,1606	1/1:1,23:24:42.14:1080,42,0	1/1:2,17:19:33.11:888,33,0	0/0:19,0:19:54.07:0,54,563	0/0:19,0:19:48.11:0,48,506	0/0:37,0:37:90.04:0,90,875	0/0:21,0:21:63.02:0,63,862	0/0:10,0:10:30:0,30,435	0/0:22,0:22:60.14:0,60,961	0/0:26,0:26:69.16:0,69,1145	1/1:3,20:24:41.82:1072,42,0	0/0:17,0:17:48.12:0,48,779	0/0:18,0:18:51.06:0,51,797	1/1:0,14:15:24.08:645,24,0	0/0:15,0:15:41.97:0,42,661	0/0:36,0:36:99:0,105,1757	0/0:9,0:9:24:0,24,321
chr10	83664802	.	GCA	G	5175.73	PASS	AB=0.837;AC=23;AF=0.442;AN=52;BaseQRankSum=6.709;DP=744;FS=2.096;HRun=0;HaplotypeScore=154.7934;InbreedingCoeff=0.6278;MQ=57.49;MQ0=8;MQRankSum=3.615;QD=13.44;ReadPosRankSum=3.054;VQSLOD=5.0597;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,35:57:71.87:852,72,0	1/1:3,10:13:27.08:316,27,0	./.	./.	0/0:29,0:29:3.48:0,3,49	0/1:20,4:25:97.46:97,0,600	1/1:14,24:39:23.67:549,24,0	0/0:10,0:20:22.39:0,22,342	0/1:14,3:18:77.35:77,0,429	1/1:10,28:38:89.91:998,90,0	1/1:6,7:13:15.04:176,15,0	0/0:35,1:38:57.62:0,58,1297	0/0:13,0:13:11.75:0,12,99	0/0:23,0:22:27.79:0,28,148	1/1:1,21:25:65.86:730,66,0	1/1:6,20:27:0.62:316,1,0	1/1:7,24:31:44.79:589,45,0	0/1:46,7:55:81.76:82,0,1531	0/0:11,0:20:32.92:0,33,288	0/0:8,0:29:39.82:0,40,386	0/0:39,0:39:22.31:0,22,203	0/0:15,0:16:10.98:0,11,58	0/0:16,1:18:1.92:0,2,656	0/0:32,3:36:46.02:0,46,1063	0/0:24,0:25:31.72:0,32,214	1/1:5,2:30:41.57:317,42,0	0/0:7,0:21:33.01:0,33,313	1/1:1,0:13:1.44:76,1,0
chr10	83664822	.	A	ACACACACACG	1637.54	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=0.004;DP=805;FS=1.194;HRun=0;HaplotypeScore=288.9079;InbreedingCoeff=0.6522;MQ=57.51;MQ0=13;MQRankSum=-1.871;QD=11.06;ReadPosRankSum=-3.063;VQSLOD=1.5985;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:73.13:0,73,1817	0/0:13,0:13:29.74:0,30,559	0/1:20,0:3:9.90:10,0,26	0/0:28,0:10:15.72:0,16,170	0/0:4,23:33:2.93:0,3,24	0/0:26,0:26:78.15:0,78,1668	0/0:31,0:31:21.20:0,21,979	0/0:30,0:30:70.89:0,71,621	0/0:17,0:17:40.56:0,41,1202	0/0:40,0:38:39.45:0,39,1669	0/0:13,0:13:17.89:0,18,385	0/0:38,0:38:99:0,108,2642	1/1:2,13:15:12.04:574,12,0	1/1:5,17:29:11.06:433,11,0	0/0:28,0:28:51.10:0,51,1260	0/0:31,0:31:53.44:0,53,812	0/0:28,0:28:32.29:0,32,1063	0/0:55,0:55:99:0,143,3530	0/0:25,0:22:15.32:0,15,417	0/0:28,0:28:34.14:0,34,615	0/1:40,0:39:99:185,0,126	1/1:3,13:18:3.01:73,3,0	0/0:20,0:20:60.06:0,60,1582	0/0:33,0:33:87.19:0,87,1919	1/1:2,19:25:14.79:515,15,0	0/0:44,0:44:81.19:0,81,1674	0/0:20,0:20:27.36:0,27,450	0/0:22,0:22:48.01:0,48,742
chr10	83665040	.	TAC	T	666.78	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=4.892;DP=600;FS=0.000;HRun=0;HaplotypeScore=88.7166;InbreedingCoeff=0.6277;MQ=70.61;MQ0=3;MQRankSum=-0.893;QD=8.77;ReadPosRankSum=0.849;VQSLOD=3.0136;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:93.30:0,93,1459	0/0:5,0:5:12.04:0,12,194	0/0:23,0:16:33.06:0,33,457	0/1:36,0:32:18.15:18,0,651	0/0:14,0:14:30.10:0,30,479	0/0:21,0:21:45.62:0,46,726	0/0:30,0:30:66.22:0,66,1058	0/0:30,0:37:83.57:0,84,877	0/0:16,0:16:42.14:0,42,675	0/0:25,0:25:48.24:0,48,914	0/0:10,0:10:24.08:0,24,387	0/0:22,0:22:54.18:0,54,863	0/0:15,0:15:36.12:0,36,563	0/0:17,0:17:48.16:0,48,772	0/0:19,0:20:54.17:0,54,847	0/0:24,0:24:43.29:0,43,898	0/0:36,0:35:93.32:0,93,1487	0/0:20,0:20:51.13:0,51,788	0/0:17,0:22:45.01:0,45,456	0/0:7,0:13:21.67:0,22,210	1/1:13,27:40:20.82:752,21,0	0/0:11,0:11:21.06:0,21,311	0/0:14,0:14:36.12:0,36,581	0/0:20,0:20:51.16:0,51,795	0/0:15,0:15:42.13:0,42,653	0/0:23,0:23:57.07:0,57,841	0/0:11,0:16:31.84:0,32,289	0/0:9,0:9:24.08:0,24,387
chr10	83665060	.	TG	T	2019.35	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.837;DP=558;FS=2.348;HRun=1;HaplotypeScore=69.8431;InbreedingCoeff=0.9962;MQ=68.65;MQ0=2;MQRankSum=-2.746;QD=29.70;ReadPosRankSum=-1.855;VQSLOD=2.9817;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,1707	0/0:6,0:6:18.06:0,18,288	0/0:17,0:12:29.41:0,29,453	0/0:31,0:26:69.16:0,69,1011	0/0:17,0:17:42.13:0,42,648	0/0:16,0:16:45.15:0,45,719	0/0:26,0:26:78.24:0,78,1220	1/1:3,24:27:76.78:968,77,0	0/0:16,0:16:45.15:0,45,719	0/0:26,0:26:78.27:0,78,1247	0/0:9,0:9:27.09:0,27,432	0/0:18,0:18:54.18:0,54,862	0/0:14,0:14:42.13:0,42,646	0/0:18,0:18:51.17:0,51,811	0/0:24,0:24:72.23:0,72,1125	0/0:21,0:21:60.20:0,60,959	0/0:35,0:34:99:0,105,1642	0/0:17,0:17:51.07:0,51,726	1/1:3,13:16:26.73:510,27,0	1/1:1,10:11:31.44:366,31,0	0/0:35,0:35:90.27:0,90,1337	0/0:11,0:11:24.08:0,24,381	0/0:14,0:14:42.14:0,42,671	0/0:22,0:22:66.16:0,66,998	0/0:15,0:15:45.14:0,45,694	0/0:27,0:27:81.28:0,81,1293	1/1:2,12:14:31.23:335,31,0	0/0:15,0:15:45.13:0,45,693
chr10	83665232	.	T	TTG	832.52	PASS	AB=0.948;AC=26;AF=0.520;AN=50;BaseQRankSum=-0.613;DP=537;FS=16.966;HRun=0;HaplotypeScore=94.9908;InbreedingCoeff=0.2925;MQ=56.94;MQ0=14;MQRankSum=-1.118;QD=2.65;ReadPosRankSum=-2.073;VQSLOD=0.3547;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,12:37:5.52:88,6,0	1/1:6,0:6:3.01:34,3,0	./.	./.	0/0:15,0:15:2.90:0,3,32	0/0:24,0:23:13.22:0,13,107	0/1:22,0:22:41.99:42,0,107	1/1:34,0:34:9.04:50,9,0	0/0:13,0:13:12.03:0,12,125	1/1:17,1:18:10.05:103,10,0	./.	0/1:12,1:16:16.44:16,0,203	0/0:12,0:13:9.74:0,10,78	0/0:12,0:13:21.09:0,21,186	1/1:10,6:17:9.10:121,9,0	0/1:11,4:16:34.34:77,0,34	1/1:12,5:18:3.97:85,4,0	0/1:22,0:24:18.80:19,0,109	1/1:23,0:23:12.03:125,12,0	1/1:8,0:16:2.70:28,3,0	0/1:21,0:19:29.73:38,0,30	0/0:16,0:17:8.82:0,9,66	0/0:13,0:13:8.89:0,9,79	0/0:14,0:16:8.85:0,9,78	0/0:10,0:14:5.52:0,6,25	1/1:9,5:19:10.99:132,11,0	1/1:8,0:8:5.59:34,6,0	0/1:19,0:19:10.73:11,0,42
chr10	83665872	.	AT	A	7204.62	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=1.410;DP=398;FS=11.035;HRun=8;HaplotypeScore=49.8177;InbreedingCoeff=0.9549;MQ=78.40;MQ0=0;MQRankSum=-4.530;QD=24.18;ReadPosRankSum=2.483;VQSLOD=4.9580;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,30:34:63.10:608,63,0	1/1:1,5:6:15.02:144,15,0	0/0:10,0:10:24.06:0,24,275	0/0:20,0:20:33.97:0,34,476	1/1:3,15:18:42.07:405,42,0	0/0:11,0:11:27.02:0,27,307	1/1:0,13:13:36.06:348,36,0	1/1:3,14:17:42.05:399,42,0	0/0:14,0:14:39.12:0,39,471	1/1:3,13:16:39.06:377,39,0	1/1:1,14:15:42.02:396,42,0	0/0:9,0:9:24.01:0,24,271	1/1:2,12:14:33.05:318,33,0	1/1:1,14:15:36.06:347,36,0	1/1:2,15:17:42.07:405,42,0	1/1:0,13:13:36.06:347,36,0	1/1:2,23:25:66.11:637,66,0	0/0:14,0:14:33.10:0,33,398	1/1:2,15:17:42:390,42,0	1/1:0,10:10:30.05:290,30,0	1/1:0,18:18:51.08:492,51,0	1/1:2,8:10:23.99:222,24,0	0/0:5,0:5:15.04:0,15,176	0/0:17,0:17:39.12:0,39,471	1/1:0,3:3:9.01:87,9,0	1/1:1,23:24:69.06:657,69,0	1/1:0,12:12:32.97:306,33,0	1/1:0,1:1:3:29,3,0
chr10	83666039	.	T	TG	11864.03	PASS	AB=0.818;AC=55;AF=0.982;AN=56;BaseQRankSum=-2.842;DP=290;FS=23.043;HRun=3;HaplotypeScore=29.8001;InbreedingCoeff=-0.0319;MQ=95.59;MQ0=0;MQRankSum=-3.397;QD=40.91;ReadPosRankSum=3.099;VQSLOD=2.5582;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:42.14:671,42,0	1/1:0,7:7:21.07:336,21,0	1/1:10,2:12:27:360,27,0	0/1:14,4:18:41.63:525,0,42	1/1:1,12:13:30.10:461,30,0	1/1:0,8:8:21.07:335,21,0	1/1:0,22:22:57.19:911,57,0	1/1:0,17:17:51.16:792,51,0	1/1:0,10:10:30.10:479,30,0	1/1:0,10:10:30.10:478,30,0	1/1:0,3:3:9.03:144,9,0	1/1:1,9:10:27.09:432,27,0	1/1:0,7:7:18.06:286,18,0	1/1:0,10:10:27.09:432,27,0	1/1:0,8:8:21.07:336,21,0	1/1:0,7:7:21.07:336,21,0	1/1:0,12:12:30.10:479,30,0	1/1:0,13:13:36.12:575,36,0	1/1:0,7:7:21.07:336,21,0	1/1:0,4:4:9.03:144,9,0	1/1:1,24:25:57.19:911,57,0	1/1:0,2:2:3.01:48,3,0	1/1:0,4:4:12.04:192,12,0	1/1:0,13:13:30.10:480,30,0	1/1:0,5:5:15.05:237,15,0	1/1:0,8:8:24.08:384,24,0	1/1:0,6:6:18.06:285,18,0	1/1:0,14:14:30.10:479,30,0
chr10	83666337	.	TTCTC	T	937.98	PASS	AB=0.963;AC=11;AF=0.196;AN=56;BaseQRankSum=11.366;DP=633;FS=5.767;HRun=0;HaplotypeScore=165.4730;InbreedingCoeff=-0.2605;MQ=52.04;MQ0=8;MQRankSum=-10.032;QD=3.65;ReadPosRankSum=1.489;VQSLOD=2.2087;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:55.73:0,56,952	0/1:15,0:15:6.06:6,0,129	0/0:6,0:1:3.01:0,3,35	0/0:4,0:2:5.16:0,5,25	0/0:35,0:35:3.16:0,3,984	0/0:23,0:23:65.93:0,66,1048	0/0:15,0:15:44.95:0,45,650	0/1:35,0:34:20.88:21,0,503	0/0:26,0:26:72.13:0,72,1384	0/0:38,0:38:25.56:0,26,1157	0/0:23,0:23:22.36:0,22,309	0/0:22,0:22:66.19:0,66,1585	0/1:20,0:20:25.66:26,0,663	0/0:25,0:25:75.12:0,75,1042	0/1:40,0:40:11.49:11,0,171	0/1:20,0:20:27.53:28,0,64	0/1:37,0:37:50.33:50,0,152	0/0:29,0:28:78.20:0,78,1836	0/1:23,0:17:6.82:7,0,302	0/1:14,0:14:99:180,0,208	0/0:8,0:8:7.24:0,7,94	0/1:4,9:13:42.45:486,0,42	0/0:21,0:21:63.11:0,63,1374	0/0:26,0:26:66.48:0,66,1340	0/0:24,0:24:32.19:0,32,969	0/0:23,0:23:29.81:0,30,622	0/1:28,0:27:83.12:246,0,83	0/1:12,0:11:19.08:19,0,29
chr10	83666341	.	CTCTTTCTTTCTT	C	6435.25	PASS	AB=0.594;AC=19;AF=0.352;AN=54;BaseQRankSum=-0.046;DP=621;FS=0.825;HRun=0;HaplotypeScore=239.5683;InbreedingCoeff=0.8701;MQ=52.01;MQ0=8;MQRankSum=4.825;QD=25.84;ReadPosRankSum=-1.531;VQSLOD=3.9518;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:56.63:790,57,0	1/1:0,14:14:26.72:488,27,0	./.	0/0:6,0:3:0.47:0,0,1	0/0:35,0:35:80.66:0,81,1566	0/0:23,0:23:42.11:0,42,1462	1/1:16,0:16:44.93:638,45,0	0/0:28,0:31:33.32:0,33,265	0/0:24,0:24:63.11:0,63,1541	1/1:5,33:38:98.96:1661,99,0	1/1:5,18:23:41.48:567,41,0	0/0:24,0:24:69.19:0,69,2630	0/0:19,0:19:45.04:0,45,1188	0/0:25,0:25:60.16:0,60,1902	1/1:8,31:39:14.90:516,15,0	1/1:3,18:21:18.06:593,18,0	0/1:12,26:38:62.96:94,0,63	0/0:26,0:25:71.71:0,72,2352	0/0:21,0:17:29.56:0,30,458	0/0:10,0:13:38.23:0,38,877	0/0:8,0:9:8.17:0,8,54	0/0:13,0:13:35.74:0,36,560	0/0:21,0:21:54.15:0,54,2093	0/0:26,0:26:49.38:0,49,1986	0/0:24,0:24:66.10:0,66,1633	1/1:4,17:21:51.02:770,51,0	0/0:26,0:25:37.35:0,37,451	1/1:3,9:11:9.03:317,9,0
chr10	83666367	.	C	CTGG	1405.19	PASS	AB=0.889;AC=5;AF=0.089;AN=56;BaseQRankSum=7.136;DP=628;FS=4.875;HRun=0;HaplotypeScore=176.6121;InbreedingCoeff=-0.1057;MQ=52.48;MQ0=5;MQRankSum=-9.604;QD=13.51;ReadPosRankSum=-1.978;VQSLOD=2.8164;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:71.94:0,72,1256	0/0:16,0:16:37.34:0,37,557	0/0:24,0:9:15.44:0,15,224	0/0:16,0:7:7.69:0,8,94	0/0:30,0:30:67.33:0,67,1007	0/0:19,0:19:57.20:0,57,995	0/0:18,0:18:54.18:0,54,930	0/1:31,0:31:99:236,0,556	0/0:24,0:24:72.23:0,72,1237	0/0:35,0:35:99:0,100,1586	0/0:23,0:22:42.60:0,43,782	0/0:29,0:29:87.30:0,87,1530	0/0:18,0:18:39.87:0,40,627	0/0:22,0:22:50.78:0,51,892	0/0:34,0:34:20.98:0,21,245	0/0:21,0:21:27.05:0,27,345	0/0:32,0:32:12.61:0,13,309	0/0:28,0:27:81.25:0,81,1372	0/1:14,1:14:99:158,0,214	0/1:12,5:17:99:350,0,217	0/0:8,0:8:10.21:0,10,134	0/1:16,0:16:99:143,0,161	0/0:23,0:23:69.24:0,69,1212	0/0:24,0:24:67.11:0,67,1144	0/0:22,0:22:54.03:0,54,925	0/0:20,0:20:55.04:0,55,871	0/1:16,9:24:61.86:635,0,62	0/0:11,0:11:15.02:0,15,184
chr10	83666376	.	T	TTTTCG	4435.82	PASS	AB=0.930;AC=11;AF=0.196;AN=56;BaseQRankSum=6.448;DP=641;FS=3.643;HRun=0;HaplotypeScore=190.9714;InbreedingCoeff=-0.0371;MQ=52.22;MQ0=2;MQRankSum=-13.169;QD=21.64;ReadPosRankSum=-1.795;VQSLOD=3.9363;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.08:0,75,1418	0/0:18,0:18:42.05:0,42,772	0/0:26,0:12:27.09:0,27,499	0/0:20,0:9:8.78:0,9,157	0/1:29,0:29:99:368,0,411	0/0:19,0:19:57.20:0,57,1182	0/0:18,0:18:54.15:0,54,1007	0/1:26,8:34:99:852,0,192	0/0:24,0:24:69.16:0,69,1318	0/0:37,0:37:99:0,106,2013	0/0:23,0:22:48.64:0,49,952	0/0:29,0:29:78.20:0,78,1415	0/1:13,0:13:99:122,0,265	0/1:22,0:22:99:174,0,348	0/0:30,0:30:23.70:0,24,378	0/0:22,0:22:32.91:0,33,543	0/0:34,0:34:26.92:0,27,503	0/0:29,0:29:75.11:0,75,1372	0/1:9,5:14:26.57:491,0,27	0/1:15,4:19:20.37:796,0,20	0/1:9,0:9:78.19:78,0,87	0/1:16,0:16:99:368,0,167	0/0:23,0:23:69.20:0,69,1293	0/0:26,0:26:66.15:0,66,1215	0/1:22,0:22:99:168,0,452	0/0:21,0:21:57.54:0,58,1109	1/1:22,5:26:10.49:1018,10,0	0/0:12,0:12:18.05:0,18,331
chr10	83666381	.	G	GTTTTGT	8926.89	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=2.015;DP=658;FS=0.000;HRun=0;HaplotypeScore=187.1653;InbreedingCoeff=0.9546;MQ=52.67;MQ0=3;MQRankSum=-12.534;QD=40.39;ReadPosRankSum=-3.493;VQSLOD=3.9992;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:57.15:0,57,1172	0/0:18,0:18:29.57:0,30,465	0/0:25,0:12:14.67:0,15,274	0/0:17,0:9:4.96:0,5,66	1/1:15,17:34:46.03:1305,46,0	0/0:19,0:19:48.16:0,48,999	0/0:20,0:20:39.07:0,39,717	1/1:21,0:34:28.50:1291,28,0	0/0:23,0:23:57.20:0,57,1203	0/0:38,0:38:90.20:0,90,1715	0/0:22,0:22:35.86:0,36,503	0/0:29,0:29:63.20:0,63,1272	1/1:9,5:17:12.04:395,12,0	1/1:16,5:23:18.06:591,18,0	0/0:31,0:31:14.65:0,15,245	0/0:23,0:23:21.07:0,21,408	0/0:36,0:36:24.08:0,24,481	0/0:25,0:25:54.18:0,54,1106	1/1:11,0:16:30.08:754,30,0	1/1:10,0:20:42.14:1177,42,0	1/1:6,3:10:9.03:216,9,0	1/1:5,13:18:36.12:1115,36,0	0/0:23,0:23:54.18:0,54,1122	0/0:26,0:26:51.13:0,51,958	1/1:13,8:22:18.05:586,18,0	0/0:22,0:22:51.13:0,51,1014	1/1:20,0:25:51.17:1496,51,0	0/0:12,0:12:11.83:0,12,205
chr10	83666577	.	T	TC	457.70	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.917;DP=614;FS=12.628;HRun=8;HaplotypeScore=64.2672;InbreedingCoeff=0.8375;MQ=76.20;MQ0=2;MQRankSum=-1.862;QD=21.80;ReadPosRankSum=-0.297;VQSLOD=2.8301;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87:0,87,785	0/0:3,0:3:3:0,3,27	0/0:34,0:29:62.81:0,63,503	0/0:27,1:23:18.33:0,18,374	0/0:27,0:27:75.04:0,75,686	0/0:22,0:22:60.02:0,60,545	1/1:0,21:21:48.14:552,48,0	0/0:34,0:34:68.76:0,69,594	0/0:16,0:16:48.01:0,48,434	0/0:12,0:12:30:0,30,271	0/0:9,0:9:24.01:0,24,219	0/0:27,0:27:72.02:0,72,654	0/0:21,0:21:57.02:0,57,522	0/0:13,0:13:35.99:0,36,324	0/0:17,0:17:45.02:0,45,412	0/0:28,0:28:81.03:0,81,737	0/0:25,0:25:56.97:0,57,510	0/0:18,0:18:42.01:0,42,384	0/0:24,0:24:38.99:0,39,353	0/0:21,0:21:53.98:0,54,481	0/0:48,0:48:99:0,123,1117	0/0:19,0:19:51.03:0,51,466	0/0:20,0:20:44.98:0,45,407	0/0:22,0:22:63.03:0,63,577	0/0:23,0:23:63.03:0,63,574	0/0:20,0:20:53.05:0,53,469	0/0:23,0:23:66.01:0,66,598	0/0:6,0:6:18.01:0,18,165
chr10	83668870	.	GTC	G	874.27	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=5.931;DP=621;FS=2.884;HRun=0;HaplotypeScore=121.1556;InbreedingCoeff=0.1374;MQ=51.12;MQ0=21;MQRankSum=-0.195;QD=2.90;ReadPosRankSum=4.042;VQSLOD=2.2542;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:0.23:0,0,174	0/0:12,0:11:3.93:0,4,78	./.	0/0:15,0:2:2.22:0,2,7	0/0:15,0:15:0:0,0,0	0/0:15,0:15:14.11:0,14,303	0/1:28,0:28:4.70:5,0,124	0/1:37,0:30:22.16:22,0,230	0/0:29,0:28:60.08:0,60,764	0/1:17,0:15:10.36:10,0,100	0/0:12,0:12:8.65:0,9,60	0/0:26,0:26:56.93:0,57,749	0/1:25,0:23:4.25:37,0,4	0/0:19,0:19:2.97:0,3,20	0/1:22,0:22:31.74:32,0,127	0/1:35,0:34:49.84:50,0,111	0/1:35,0:34:99:111,0,108	0/0:22,0:22:53.81:0,54,653	0/1:12,0:11:0.02:0,0,136	0/0:20,0:19:23.51:0,24,193	1/1:40,1:38:28.21:303,28,0	0/0:17,0:17:0:0,0,0	0/0:17,0:17:32.73:0,33,394	0/0:50,0:48:59.29:0,59,1220	0/0:15,0:15:0:0,0,0	1/1:7,19:27:42.79:410,43,0	0/1:15,0:15:2.08:2,0,149	1/1:5,2:6:2.29:35,2,0
chr10	83668887	.	TCA	T	2099.16	PASS	AB=0.934;AC=30;AF=0.625;AN=48;BaseQRankSum=6.722;DP=623;FS=4.519;HRun=0;HaplotypeScore=113.0320;InbreedingCoeff=0.2108;MQ=50.06;MQ0=26;MQRankSum=-1.751;QD=4.60;ReadPosRankSum=-0.604;VQSLOD=2.0767;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,1:32:35.04:130,0,35	1/1:14,0:13:9.22:74,9,0	./.	./.	./.	0/1:12,1:12:16.06:16,0,179	0/1:11,18:28:0:0,0,0	1/1:31,0:25:7.84:85,8,0	0/0:24,0:23:39.04:0,39,512	1/1:19,1:17:20.62:200,21,0	./.	0/0:30,0:28:15.14:0,15,510	1/1:20,3:21:20.11:173,20,0	1/1:12,3:15:5.92:41,6,0	1/1:24,0:24:26.94:295,27,0	1/1:29,0:28:16.57:401,17,0	1/1:43,0:42:45.96:598,46,0	0/0:25,0:24:53.93:0,54,651	0/1:15,0:14:40.08:47,0,40	0/0:24,0:23:0.16:0,0,2	0/1:41,0:40:9.74:10,0,74	1/1:14,5:19:2.65:11,3,0	0/0:19,0:19:24.04:0,24,317	0/1:43,2:42:28.85:29,0,955	1/1:11,2:13:2.98:22,3,0	0/1:28,0:28:63.85:64,0,109	0/1:17,0:15:44.42:44,0,51	1/1:4,0:3:4.83:19,5,0
chr10	83668908	.	CAG	C	2290.49	PASS	AB=1.000;AC=37;AF=0.712;AN=52;BaseQRankSum=6.947;DP=585;FS=12.737;HRun=0;HaplotypeScore=106.9792;InbreedingCoeff=0.3245;MQ=47.51;MQ0=21;MQRankSum=-1.303;QD=4.78;ReadPosRankSum=-4.631;VQSLOD=-0.3619;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:22.60:143,23,0	1/1:12,0:11:0.89:68,1,0	./.	./.	1/1:12,0:11:2.50:9,2,0	0/0:13,0:11:1.53:0,2,132	1/1:36,0:35:12.75:228,13,0	1/1:11,21:28:11.10:333,11,0	0/0:23,0:22:27.17:0,27,378	0/1:24,0:20:7.05:160,0,7	1/1:10,0:10:2.99:24,3,0	0/1:31,0:30:40.40:40,0,350	1/1:19,0:17:31.23:181,31,0	1/1:12,0:12:5.91:40,6,0	1/1:24,0:24:23.14:196,23,0	1/1:25,0:25:13.20:156,13,0	0/1:47,0:45:0.11:366,0,0	0/0:23,0:22:5.42:0,5,537	1/1:16,0:15:6.19:130,6,0	1/1:17,0:16:0.57:20,1,0	1/1:44,0:44:18.46:166,18,0	1/1:18,0:17:2.47:9,2,0	0/0:15,4:19:35.30:0,35,268	0/1:41,0:38:11.31:11,0,698	1/1:10,0:10:10.68:49,11,0	0/0:28,0:27:17.18:0,17,291	1/1:13,0:11:6.53:89,7,0	0/1:6,0:5:24.44:30,0,24
chr10	83668910	.	GAC	G	378.45	PASS	AB=0.985;AC=17;AF=0.315;AN=54;BaseQRankSum=1.402;DP=588;FS=11.015;HRun=0;HaplotypeScore=109.8102;InbreedingCoeff=0.3413;MQ=47.40;MQ0=20;MQRankSum=1.994;QD=1.81;ReadPosRankSum=0.438;VQSLOD=1.2464;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:9.87:0,10,67	0/1:13,0:12:6.25:6,0,56	./.	0/1:1,0:1:0:0,0,0	1/1:11,1:11:3.01:33,3,0	0/1:12,0:11:4.97:5,0,79	0/0:41,0:40:14.58:0,15,107	0/0:30,0:27:0.36:0,0,15	0/0:23,0:22:9.26:0,9,241	0/0:24,0:20:18.69:0,19,139	0/0:11,0:11:5.99:0,6,49	0/1:30,1:30:86.06:86,0,239	1/1:16,2:17:17.58:156,18,0	1/1:6,6:12:6.02:66,6,0	0/0:25,0:25:23.89:0,24,210	0/1:25,0:25:11.09:11,0,124	0/0:47,0:45:33.42:0,33,341	0/0:23,0:22:13.86:0,14,327	0/0:19,0:18:11.47:0,11,69	0/1:16,0:15:0.28:0,0,1	0/0:44,0:44:11.99:0,12,108	1/1:14,4:17:2.98:33,3,0	0/0:19,0:19:15.05:0,15,210	0/1:39,0:36:34.01:34,0,393	1/1:7,2:10:9.02:100,9,0	0/0:27,0:26:37.69:0,38,411	0/0:11,0:9:9.34:0,9,74	0/0:6,0:5:4.83:0,5,48
chr10	83669088	.	C	CT	2249.04	PASS	AB=0.900;AC=33;AF=0.589;AN=56;BaseQRankSum=3.839;DP=480;FS=6.430;HRun=13;HaplotypeScore=71.1754;InbreedingCoeff=0.6825;MQ=59.20;MQ0=6;MQRankSum=-2.077;QD=7.40;ReadPosRankSum=0.075;VQSLOD=2.4582;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,11:27:8.17:307,8,0	1/1:2,5:7:12.01:111,12,0	0/0:18,0:4:6.37:0,6,39	0/1:36,0:17:11.95:21,0,12	1/1:17,0:17:33.12:150,33,0	0/0:14,0:14:19.76:0,20,127	0/1:7,6:14:19.43:136,0,19	0/0:22,0:35:31.45:0,31,154	0/1:18,0:18:6.51:7,0,145	1/1:10,10:21:25.56:234,26,0	1/1:5,2:15:17.71:126,18,0	0/0:23,0:23:22.05:0,22,143	1/1:7,0:7:2.74:12,3,0	1/1:9,0:9:9.93:39,10,0	1/1:2,5:7:9.01:83,9,0	1/1:8,5:13:23.94:208,24,0	1/1:12,18:30:30.50:275,30,0	0/0:22,0:22:40.75:0,41,255	0/0:12,0:18:20.29:0,20,82	0/0:1,0:3:7.02:0,7,30	1/1:4,9:14:14.15:161,14,0	1/1:12,0:11:16.07:73,16,0	0/0:6,0:5:2.93:0,3,20	0/0:21,0:22:46.29:0,46,303	1/1:17,0:17:19.21:85,19,0	1/1:10,7:17:23.85:203,24,0	0/0:3,0:14:15.48:0,15,45	1/1:11,8:20:23.07:225,23,0
chr10	83669095	.	T	TTTC	1505.40	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-0.849;DP=482;FS=4.518;HRun=0;HaplotypeScore=90.2113;InbreedingCoeff=0.8392;MQ=57.01;MQ0=12;MQRankSum=0.137;QD=23.52;ReadPosRankSum=2.735;VQSLOD=3.5006;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:58.49:0,58,407	0/0:8,0:8:20.40:0,20,126	0/0:29,0:5:7.78:0,8,60	0/0:41,0:17:22.10:0,22,173	1/1:1,14:16:36.09:637,36,0	0/0:12,0:12:30.07:0,30,394	0/0:15,0:15:32.21:0,32,252	0/0:36,0:36:80.48:0,80,794	0/0:17,0:17:48.96:0,49,598	0/0:17,0:17:44.73:0,45,286	0/0:15,0:14:23.89:0,24,149	0/0:20,0:19:35.92:0,36,459	1/1:2,3:5:3:60,3,0	1/1:0,8:8:12.04:228,12,0	0/0:6,0:6:11.63:0,12,72	0/0:14,0:14:31.92:0,32,184	0/0:30,0:29:52.32:0,52,324	0/0:21,0:21:53.16:0,53,703	0/0:20,0:19:44.96:0,45,438	0/0:4,0:4:12.02:0,12,130	0/0:14,0:14:23.26:0,23,146	1/1:2,7:9:18.02:323,18,0	0/1:7,0:6:2.93:3,0,63	0/0:20,0:20:57.13:0,57,799	1/1:3,15:18:21.02:419,21,0	0/0:14,0:14:27:0,27,235	0/0:15,0:15:27.03:0,27,262	0/0:20,0:19:32.03:0,32,198
chr10	83669101	.	T	TTC	1057.62	PASS	AB=0.962;AC=20;AF=0.357;AN=56;BaseQRankSum=4.844;DP=422;FS=6.089;HRun=0;HaplotypeScore=82.6125;InbreedingCoeff=0.2297;MQ=56.20;MQ0=14;MQRankSum=1.686;QD=4.92;ReadPosRankSum=0.598;VQSLOD=1.7534;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:26,1:26:74.84:198,0,75	0/1:6,0:6:1.25:49,0,1	0/0:32,0:5:8.96:0,9,77	0/1:45,0:16:21.51:22,0,63	1/1:14,0:14:19.33:122,19,0	0/0:11,0:11:24:0,24,266	0/1:11,3:14:93.48:106,0,93	0/0:31,0:31:62.18:0,62,480	0/0:14,0:14:15.14:0,15,388	0/1:16,0:16:39.08:91,0,39	0/1:6,0:6:0.01:64,0,0	0/0:18,0:17:26.88:0,27,313	1/1:2,0:2:0.89:2,1,0	0/0:7,0:7:3.23:0,3,17	1/1:5,0:5:8.05:34,8,0	0/1:12,1:13:27.78:60,0,28	0/1:24,0:23:36.75:106,0,37	0/0:22,0:22:50.26:0,50,560	0/0:15,0:14:38.98:0,39,242	0/0:5,0:5:12.19:0,12,71	0/1:12,0:12:0.95:56,0,1	1/1:7,0:7:4.19:29,4,0	0/0:7,0:6:5.98:0,6,53	0/0:19,0:19:54.08:0,54,644	0/0:13,0:13:4.30:0,4,51	1/1:9,1:9:22.14:156,22,0	0/0:13,0:13:26.49:0,26,167	0/1:12,1:12:5.80:131,0,6
chr10	83669666	.	AAAAAAAC	A	1703.21	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.087;DP=608;FS=11.253;HRun=0;HaplotypeScore=138.0559;InbreedingCoeff=0.9855;MQ=61.28;MQ0=2;MQRankSum=-0.594;QD=25.05;ReadPosRankSum=-3.352;VQSLOD=2.2419;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:58.02:0,58,1835	0/0:7,0:7:18.06:0,18,561	0/0:25,0:22:14.71:0,15,461	0/0:14,0:12:24.04:0,24,452	0/0:13,0:13:27.07:0,27,658	0/0:28,0:28:69.22:0,69,2117	0/0:32,0:32:75.21:0,75,2101	1/1:8,13:21:41.72:436,42,0	0/0:17,0:17:45.15:0,45,1512	0/0:26,0:25:63.19:0,63,1912	0/0:11,0:11:24.08:0,24,684	0/0:24,0:24:60.17:0,60,1680	0/0:25,0:25:57.19:0,57,1803	0/0:27,0:27:60.21:0,60,2068	0/0:32,0:32:72.24:0,72,2180	0/0:25,0:25:54.18:0,54,1562	0/0:56,0:56:99:0,123,4071	0/0:19,0:19:36.59:0,37,1169	1/1:3,10:13:30.06:423,30,0	1/1:3,12:15:36.02:628,36,0	0/0:18,0:18:45.15:0,45,1426	0/0:16,0:16:30.10:0,30,765	0/0:10,0:10:21.07:0,21,698	0/0:34,0:34:75.21:0,75,2398	0/0:12,0:12:30.10:0,30,851	0/0:33,0:33:75.25:0,75,2303	1/1:6,13:19:18.06:375,18,0	0/0:8,0:7:18.06:0,18,413
chr10	83671690	.	AG	A	2450.49	PASS	AB=0.949;AC=25;AF=0.446;AN=56;BaseQRankSum=-8.212;DP=499;FS=8.052;HRun=10;HaplotypeScore=63.4330;InbreedingCoeff=0.4546;MQ=63.62;MQ0=18;MQRankSum=2.021;QD=10.08;ReadPosRankSum=3.424;VQSLOD=2.1127;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,30:35:44.84:593,45,0	1/1:1,2:3:6:52,6,0	0/0:50,0:13:13.66:0,14,124	0/0:49,0:13:21.19:0,21,167	0/1:13,0:13:3.14:3,0,58	0/0:10,0:18:20.17:0,20,118	1/1:5,11:13:20.99:182,21,0	0/0:17,0:17:18.01:0,18,174	0/0:8,0:10:20.68:0,21,145	1/1:5,9:14:24.58:203,25,0	1/1:2,6:8:14.98:130,15,0	0/0:13,0:20:28.81:0,29,194	0/1:10,0:10:10.51:11,0,19	0/1:15,0:15:15.63:16,0,46	0/1:8,10:18:34.49:279,0,34	1/1:4,12:16:29.98:260,30,0	1/1:17,19:36:36.64:594,37,0	0/0:12,0:35:33.02:0,33,206	0/0:16,0:15:27.06:0,27,284	0/0:6,0:7:11.85:0,12,105	0/1:14,0:14:27.41:27,0,53	0/1:15,0:15:20.77:21,0,33	0/0:6,0:16:10.80:0,11,51	0/0:1,0:7:5.68:0,6,28	0/1:12,0:12:40.45:40,0,70	1/1:6,7:13:6.72:162,7,0	0/0:10,0:10:27.04:0,27,284	1/1:2,3:5:8.99:78,9,0
chr10	83673300	.	A	AG	874.72	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.618;DP=543;FS=0.000;HRun=8;HaplotypeScore=68.1089;InbreedingCoeff=0.7782;MQ=80.22;MQ0=0;MQRankSum=-0.054;QD=19.88;ReadPosRankSum=-0.330;VQSLOD=3.2797;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:60.02:0,60,549	0/0:6,0:6:17.98:0,18,157	0/0:16,0:15:7.33:0,7,195	0/0:19,0:19:4.29:0,4,171	0/0:17,0:17:48.01:0,48,434	0/0:12,0:12:30.01:0,30,275	0/0:20,0:20:57:0,57,512	0/0:7,0:7:14.97:0,15,127	0/0:17,0:17:39.01:0,39,357	0/0:12,0:13:23.03:0,23,196	0/0:7,0:7:14.99:0,15,131	0/0:32,0:32:75:0,75,682	0/0:24,0:24:65.99:0,66,600	0/0:33,0:33:83.94:0,84,757	0/0:27,0:27:75.04:0,75,686	0/0:20,0:20:51:0,51,460	0/0:23,0:23:54.02:0,54,494	0/0:23,0:23:62.99:0,63,569	0/0:18,0:18:16.67:0,17,327	0/0:9,0:9:24.01:0,24,219	1/1:12,32:43:84.25:969,84,0	0/0:16,0:16:38.37:0,38,337	0/0:14,0:14:36.01:0,36,328	0/0:24,0:24:69:0,69,624	0/0:19,0:18:48:0,48,439	0/0:27,0:27:57.02:0,57,521	0/0:19,0:19:51.01:0,51,461	0/0:12,0:12:30.01:0,30,274
chr10	83673522	.	G	GTT	4630.67	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=10.669;DP=554;FS=5.549;HRun=8;HaplotypeScore=128.3874;InbreedingCoeff=0.9058;MQ=65.64;MQ0=1;MQRankSum=-4.487;QD=13.99;ReadPosRankSum=4.091;VQSLOD=1.8527;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:39:43.12:161,43,0	1/1:9,0:10:22.21:80,22,0	0/0:19,0:12:15.35:0,15,264	0/1:19,0:16:32.70:33,0,70	1/1:7,14:23:47.42:590,47,0	0/0:12,0:12:32.84:0,33,331	1/1:17,0:17:28.56:112,29,0	0/0:34,0:34:76.97:0,77,821	0/0:20,0:20:54.14:0,54,594	1/1:22,0:23:35.30:179,35,0	1/1:17,0:17:34.54:128,35,0	0/0:18,0:18:45.08:0,45,488	1/1:3,12:15:42.14:658,42,0	1/1:13,5:18:47.10:650,47,0	1/1:26,0:28:55.85:236,56,0	1/1:15,0:15:26.03:92,26,0	1/1:18,0:20:35.21:153,35,0	0/0:23,0:23:63.08:0,63,670	0/0:18,0:18:42.08:0,42,454	0/0:13,0:13:27.04:0,27,298	1/1:5,0:7:5.46:94,5,0	1/1:5,12:17:36.08:528,36,0	0/0:17,0:17:48.13:0,48,532	0/0:23,0:23:50.54:0,51,560	1/1:7,17:23:45.13:657,45,0	1/1:19,0:20:17.99:137,18,0	0/0:24,0:24:53.81:0,54,576	1/1:17,0:18:30.74:141,31,0
chr10	83673526	.	T	TG	7488.64	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=5.852;DP=554;FS=1.943;HRun=0;HaplotypeScore=106.3925;InbreedingCoeff=0.8824;MQ=66.02;MQ0=2;MQRankSum=-2.456;QD=32.42;ReadPosRankSum=5.018;VQSLOD=4.5326;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,37:39:99:1423,102,0	1/1:1,9:10:30.07:406,30,0	0/0:23,0:12:12.59:0,13,363	0/1:19,0:15:0.09:0,0,175	0/0:21,0:21:40.08:0,40,310	0/0:12,0:12:36.10:0,36,475	1/1:4,15:19:48.05:628,48,0	0/0:36,0:36:99:0,102,1283	0/0:18,0:18:54.18:0,54,754	1/1:3,19:22:63.14:822,63,0	1/1:0,17:17:51:685,51,0	0/0:17,0:17:51.15:0,51,680	0/0:15,0:15:36.60:0,37,187	0/0:19,0:18:39.26:0,39,283	1/1:3,23:26:72.16:978,72,0	1/1:0,14:14:36.12:519,36,0	1/1:4,16:20:51.02:691,51,0	0/0:26,0:26:69.16:0,69,921	0/0:16,0:16:48.14:0,48,636	0/0:15,0:15:39.10:0,39,496	0/1:7,0:7:35.54:36,0,46	0/0:16,0:16:39.87:0,40,237	0/0:18,0:18:51.16:0,51,697	0/0:23,0:23:59.89:0,60,783	0/0:24,0:23:40.47:0,40,222	1/1:1,19:20:60.13:769,60,0	0/0:24,0:24:60.13:0,60,772	1/1:1,17:18:39.11:531,39,0
chr10	83673530	.	TG	T	3209	PASS	AB=0.908;AC=26;AF=0.464;AN=56;BaseQRankSum=10.818;DP=538;FS=1.942;HRun=1;HaplotypeScore=118.5624;InbreedingCoeff=0.7123;MQ=63.68;MQ0=4;MQRankSum=-2.806;QD=11.75;ReadPosRankSum=2.740;VQSLOD=2.3360;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:38:99:592,100,0	1/1:10,0:10:27.18:142,27,0	0/0:24,1:13:32.96:0,33,343	0/1:16,2:13:13.38:13,0,89	0/1:22,0:22:89.68:90,0,127	0/0:11,0:11:31.65:0,32,411	1/1:20,0:20:48.75:274,49,0	0/0:35,0:35:99:0,105,1170	0/0:18,0:18:54.17:0,54,727	1/1:18,0:19:48.48:311,48,0	1/1:17,0:17:49.06:287,49,0	0/0:16,0:16:39.08:0,39,565	0/0:15,0:15:33.78:0,34,133	0/1:12,7:18:44.20:193,0,44	1/1:24,0:24:65.36:363,65,0	1/1:14,0:14:34.54:197,35,0	1/1:19,0:19:54.25:313,54,0	0/0:25,0:25:71.79:0,72,880	0/0:19,0:17:50.86:0,51,593	0/0:14,0:14:33.05:0,33,414	1/1:5,2:7:13.33:89,13,0	0/1:15,0:15:41.20:41,0,138	0/0:18,0:18:51.14:0,51,663	0/0:20,0:20:50.39:0,50,705	0/0:21,0:20:32.82:0,33,176	1/1:18,0:18:51.95:308,52,0	0/0:28,0:28:46.49:0,46,693	1/1:13,0:13:37.47:215,37,0
chr10	83673550	.	C	CT	2010.72	PASS	AB=0.801;AC=19;AF=0.339;AN=56;BaseQRankSum=0.792;DP=539;FS=7.179;HRun=13;HaplotypeScore=122.2381;InbreedingCoeff=0.5064;MQ=54.99;MQ0=14;MQRankSum=-3.305;QD=8.14;ReadPosRankSum=-1.370;VQSLOD=1.9243;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,2:38:10.19:0,10,380	1/1:6,1:7:13.26:85,13,0	0/0:22,0:9:2.55:0,3,44	0/1:14,0:9:2:2,0,14	0/0:19,0:21:14.17:0,14,150	0/0:14,0:15:10.24:0,10,120	1/1:13,8:19:8.79:198,9,0	0/1:10,16:29:4.34:328,0,4	0/0:17,0:19:26.01:0,26,146	0/1:13,6:20:3.67:162,0,4	0/1:12,1:13:5.79:64,0,6	0/0:16,0:17:28.81:0,29,170	0/0:13,0:13:20.57:0,21,118	0/0:15,0:14:6.57:0,7,118	1/1:12,9:21:38.67:335,39,0	0/1:9,4:12:1.42:136,0,1	1/1:6,9:15:32.97:242,33,0	0/0:24,1:26:16.19:0,16,264	1/1:15,12:21:9.32:194,9,0	1/1:4,11:15:15.80:126,16,0	0/0:3,0:8:3.27:0,3,9	0/0:15,0:16:26.40:0,26,132	0/0:19,0:19:4.92:0,5,163	0/0:26,0:25:28.07:0,28,271	0/0:17,0:18:17.13:0,17,102	0/1:14,2:17:33.04:33,0,112	0/1:15,15:30:0.01:287,0,0	0/0:13,0:13:23.73:0,24,164
chr10	83673857	.	GACACACACACACACACAC	G	3944.72	PASS	AB=0.623;AC=8;AF=0.143;AN=56;BaseQRankSum=8.141;DP=562;FS=1.556;HRun=0;HaplotypeScore=240.7595;InbreedingCoeff=0.6880;MQ=53.61;MQ0=11;MQRankSum=-5.198;QD=41.52;ReadPosRankSum=1.223;VQSLOD=3.0783;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:33:42.11:0,42,1951	0/0:2,0:2:6.02:0,6,362	0/0:20,0:8:2.98:0,3,22	0/0:22,0:12:21:0,21,511	0/1:10,10:20:8.85:351,0,9	0/0:15,0:16:39.12:0,39,2150	0/0:14,0:33:34.64:0,35,1292	0/0:30,0:29:45.08:0,45,1557	0/0:11,0:13:30.10:0,30,2126	0/0:14,0:14:33.06:0,33,1277	0/0:3,0:14:25.12:0,25,1179	0/0:16,0:16:42.08:0,42,2479	1/1:0,15:15:30.10:1447,30,0	1/1:5,11:16:15.05:662,15,0	0/0:10,0:24:24.05:0,24,1279	0/0:11,0:21:26.29:0,26,1601	0/0:13,0:21:30.91:0,31,1256	0/0:27,0:28:63.22:0,63,4338	0/0:12,0:11:9.03:0,9,351	0/0:16,0:16:21.04:0,21,1074	0/0:26,0:31:60.18:0,60,2709	0/1:6,16:22:2.40:478,0,2	0/0:15,0:17:30.10:0,30,2125	0/0:31,0:34:73.89:0,74,5047	1/1:7,13:21:21.07:1006,21,0	0/0:18,0:25:54.16:0,54,2073	0/0:8,0:7:6.49:0,6,381	0/0:7,0:12:21.07:0,21,902
chr10	83675130	.	AT	A	551.91	PASS	AB=0.882;AC=11;AF=0.196;AN=56;BaseQRankSum=2.926;DP=295;FS=4.249;HRun=12;HaplotypeScore=36.6848;InbreedingCoeff=0.5354;MQ=71.17;MQ0=0;MQRankSum=1.380;QD=6.27;ReadPosRankSum=-2.103;VQSLOD=0.5441;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:57.01:0,57,545	0/0:2,0:2:3.01:0,3,30	0/0:8,0:7:9.02:0,9,90	0/1:11,0:9:2.96:3,0,75	0/0:6,0:6:12.02:0,12,122	0/0:5,0:5:11.93:0,12,99	0/0:17,0:17:36.02:0,36,349	1/1:5,12:17:38.64:289,39,0	0/0:6,0:6:8.99:0,9,81	0/0:13,0:13:33.03:0,33,324	0/1:4,1:5:11.21:11,0,78	0/0:7,0:7:18.04:0,18,182	0/0:4,0:4:12.01:0,12,116	0/0:5,0:5:14.98:0,15,136	0/0:6,0:6:9.02:0,9,91	0/0:4,0:4:9.02:0,9,91	0/0:40,0:40:86.93:0,87,851	0/1:21,3:24:6.58:7,0,485	1/1:6,11:17:32.22:236,32,0	1/1:0,5:5:11.95:93,12,0	0/0:0,0:13:25.56:0,26,129	0/0:7,0:7:18.04:0,18,183	0/0:2,0:2:6.01:0,6,60	0/0:17,0:17:39.01:0,39,377	0/0:6,0:6:18:0,18,172	0/0:9,1:10:0.78:0,1,180	1/1:2,6:8:8.96:70,9,0	0/0:3,0:3:9.02:0,9,91
chr10	83676781	.	GCC	G	4643.41	PASS	AB=0.545;AC=23;AF=0.426;AN=54;BaseQRankSum=0.217;DP=434;FS=13.376;HRun=10;HaplotypeScore=67.4109;InbreedingCoeff=0.8503;MQ=75.60;MQ0=0;MQRankSum=-1.425;QD=23.81;ReadPosRankSum=-0.065;VQSLOD=2.6653;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:19:40.40:0,40,148	0/0:2,0:2:0:0,0,0	0/0:11,0:11:26.54:0,27,319	0/0:11,0:11:12.01:0,12,134	1/1:2,5:7:12.03:134,12,0	0/0:14,0:14:27.09:0,27,426	0/0:2,1:24:12:0,12,112	1/1:9,16:25:48.09:535,48,0	0/0:12,0:13:35.47:0,35,504	0/0:3,0:11:19.96:0,20,69	0/0:0,0:4:4.98:0,5,17	0/0:21,0:23:59.68:0,60,892	1/1:0,10:10:27.07:301,27,0	1/1:1,17:17:39.10:435,39,0	0/1:2,1:12:15.45:15,0,33	0/0:2,0:16:32.44:0,32,112	0/0:0,1:24:21.96:0,22,147	0/0:25,0:28:70.65:0,71,977	1/1:4,13:17:39.07:424,39,0	./.	1/1:9,40:49:99:1204,108,0	1/1:0,13:13:36.10:401,36,0	0/0:3,0:3:5.49:0,5,35	0/0:31,0:35:82.74:0,83,1214	1/1:3,5:8:15.03:167,15,0	1/1:3,12:16:30.01:392,30,0	1/1:0,13:13:36.10:401,36,0	1/1:0,7:7:21.06:234,21,0
chr10	83676942	.	GTT	G	10113.22	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=16.198;DP=515;FS=1.446;HRun=4;HaplotypeScore=79.0368;InbreedingCoeff=0.9948;MQ=75.80;MQ0=0;MQRankSum=-3.190;QD=39.35;ReadPosRankSum=1.516;VQSLOD=4.2828;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:39:96.32:1413,96,0	1/1:0,9:9:24.08:353,24,0	0/0:14,0:14:42.14:0,42,758	0/0:16,0:16:48.16:0,48,861	1/1:0,17:17:45.15:662,45,0	0/0:16,0:16:45.15:0,45,843	1/1:1,35:36:96.24:1414,96,0	0/0:22,0:22:63.21:0,63,1151	0/0:11,0:11:33.11:0,33,618	1/1:0,11:11:33.10:469,33,0	1/1:1,6:7:13.81:217,14,0	0/0:28,0:28:84.29:0,84,1560	1/1:0,9:9:24.08:353,24,0	1/1:1,13:13:33.11:486,33,0	1/1:1,15:16:45.15:663,45,0	1/1:1,19:20:51.17:751,51,0	1/1:2,18:20:60.15:839,60,0	0/0:32,0:32:96.29:0,96,1732	0/0:19,0:19:57.17:0,57,998	0/0:6,0:6:18.06:0,18,337	0/0:56,0:56:99:0,169,3115	1/1:0,12:12:33.11:485,33,0	0/0:8,0:8:24.08:0,24,449	0/0:21,0:21:63.17:0,63,1127	1/1:0,17:17:51.17:751,51,0	1/1:1,14:15:42.11:595,42,0	0/0:9,0:9:24.08:0,24,449	1/1:0,15:15:45.15:662,45,0
chr10	83677046	.	TC	T	2850.83	PASS	AB=0.925;AC=23;AF=0.411;AN=56;BaseQRankSum=1.408;DP=416;FS=10.924;HRun=10;HaplotypeScore=51.9638;InbreedingCoeff=0.7143;MQ=77.55;MQ0=0;MQRankSum=0.516;QD=14.55;ReadPosRankSum=3.743;VQSLOD=2.6504;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,19:25:53.98:469,54,0	1/1:3,6:9:14.99:130,15,0	0/0:21,0:20:20.52:0,21,329	0/0:15,0:14:22.85:0,23,209	0/0:13,0:13:21.03:0,21,224	0/1:12,1:13:11.01:11,0,117	1/1:6,27:33:74.98:651,75,0	0/1:6,0:9:0.34:0,0,15	0/0:13,0:13:26.98:0,27,274	1/1:4,6:10:17.94:147,18,0	1/1:0,6:6:15:130,15,0	0/0:21,0:21:51.06:0,51,525	0/0:8,0:8:18.03:0,18,185	0/0:10,0:10:27.06:0,27,290	1/1:2,9:11:20.99:182,21,0	1/1:3,12:15:35.98:313,36,0	1/1:7,27:35:74:631,74,0	0/0:24,1:25:34.11:0,34,590	0/0:5,0:5:0.61:0,1,16	0/0:5,0:5:2.97:0,3,20	0/0:18,0:20:26.81:0,27,165	0/1:9,2:11:25.05:25,0,196	0/0:13,0:13:21.06:0,21,232	0/0:26,0:26:63.15:0,63,681	0/0:16,1:17:16.15:0,16,398	1/1:2,12:14:35.99:312,36,0	0/0:4,0:8:0:0,0,0	1/1:2,2:4:6:52,6,0
chr10	83677638	.	TC	T	2995.10	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=3.572;DP=424;FS=18.755;HRun=10;HaplotypeScore=51.7481;InbreedingCoeff=0.7342;MQ=72.93;MQ0=0;MQRankSum=-0.399;QD=17.83;ReadPosRankSum=6.273;VQSLOD=2.3837;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:69.06:0,69,720	1/1:0,5:5:11.95:104,12,0	0/0:11,0:11:14.84:0,15,126	0/1:8,0:8:28.98:29,0,51	0/0:10,0:10:7.96:0,8,45	0/0:17,0:17:39.09:0,39,422	1/1:2,22:24:53.99:469,54,0	0/0:22,0:22:11.83:0,12,91	0/0:13,1:14:0.96:0,1,205	1/1:0,10:10:23.98:204,24,0	1/1:3,7:10:20.61:175,21,0	0/0:16,1:17:10.02:0,10,323	0/0:2,0:8:5.78:0,6,35	0/0:3,0:13:5.84:0,6,34	1/1:2,18:20:44.98:391,45,0	1/1:1,18:19:50.99:443,51,0	1/1:4,32:36:83.98:729,84,0	0/0:22,0:22:45.07:0,45,476	0/0:8,0:10:20.38:0,20,120	0/1:5,0:5:0.01:0,0,0	0/0:5,0:10:5.10:0,5,21	0/0:3,0:7:2.84:0,3,14	0/0:14,0:14:27.06:0,27,290	0/0:25,1:26:40.07:0,40,630	0/0:5,0:6:2.49:0,2,14	1/1:3,18:21:47.96:415,48,0	0/0:8,0:19:14.52:0,15,88	1/1:0,10:10:26.99:234,27,0
chr10	83683895	.	GGGGGTGGGGGACACT	G	25819.16	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=17.485;DP=705;FS=14.965;HRun=0;HaplotypeScore=289.8911;InbreedingCoeff=0.9903;MQ=73.26;MQ0=1;MQRankSum=-17.624;QD=77.30;ReadPosRankSum=5.021;VQSLOD=3.3872;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,46:53:96.33:4155,96,0	1/1:1,5:6:9.03:390,9,0	0/0:29,0:28:65.94:0,66,2765	0/0:21,0:19:47.96:0,48,2457	1/1:2,14:16:21.03:907,21,0	0/0:11,0:11:30.10:0,30,2152	1/1:5,17:22:35.84:1558,36,0	0/0:27,0:27:72.21:0,72,4200	0/0:20,0:20:54.17:0,54,3417	1/1:6,15:21:51.15:1830,51,0	1/1:2,10:12:21.04:673,21,0	0/0:44,0:44:99:0,123,8271	1/1:4,25:29:57.20:2467,57,0	1/1:4,35:39:84.29:3637,84,0	1/1:4,30:34:72.25:3118,72,0	1/1:3,27:30:57.11:2468,57,0	1/1:5,24:29:30.10:1240,30,0	0/0:28,0:28:69.24:0,69,4284	0/0:18,0:18:36.11:0,36,2121	0/0:8,0:8:24.08:0,24,1518	0/0:66,0:66:99:0,175,11134	1/1:3,18:21:42.14:1817,42,0	0/0:12,0:12:33.11:0,33,2218	0/0:26,0:26:69.23:0,69,4672	1/1:3,19:22:36.12:1557,36,0	0/0:22,0:22:63.20:0,63,3968	0/0:28,0:28:81.25:0,81,5333	0/0:11,0:11:30.10:0,30,2160
chr10	83683901	.	GGGGGACACTGGGGT	G	18279.56	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=18.809;DP=672;FS=16.600;HRun=0;HaplotypeScore=291.2124;InbreedingCoeff=0.9896;MQ=75.80;MQ0=1;MQRankSum=-18.425;QD=60.33;ReadPosRankSum=6.657;VQSLOD=3.2473;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:50,0:50:96.33:2968,96,0	1/1:5,0:5:9.03:279,9,0	0/0:28,0:27:74.57:0,75,3209	0/0:25,0:23:55.92:0,56,3047	1/1:14,0:14:21.06:647,21,0	0/0:10,0:10:30.10:0,30,2066	1/1:17,0:17:35.85:1113,36,0	0/0:28,0:28:84.25:0,84,4804	0/0:19,0:19:57.18:0,57,3438	1/1:16,1:17:27.24:1205,27,0	1/1:10,0:10:17.89:431,18,0	0/0:45,0:45:99:0,132,8450	1/1:27,0:27:57.20:1763,57,0	1/1:37,0:37:84.29:2599,84,0	1/1:30,0:30:72.25:2227,72,0	1/1:27,1:28:57.20:1763,57,0	1/1:26,1:27:30.10:871,30,0	0/0:28,0:28:75.26:0,75,4371	0/0:15,0:15:42.11:0,42,2391	0/0:8,0:8:24.08:0,24,1436	0/0:64,0:64:99:0,187,11318	1/1:20,1:21:42.14:1302,42,0	0/0:11,0:11:33.11:0,33,2122	0/0:27,0:27:78.26:0,78,5011	1/1:20,0:20:36.12:1112,36,0	0/0:23,0:23:66.20:0,66,4016	0/0:27,0:27:81.26:0,81,5110	0/0:11,0:11:33.11:0,33,2255
chr10	83685432	.	C	CA	5828.45	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-11.823;DP=720;FS=16.995;HRun=4;HaplotypeScore=66.9673;InbreedingCoeff=0.9980;MQ=67.41;MQ0=1;MQRankSum=0.171;QD=35.76;ReadPosRankSum=-1.320;VQSLOD=2.8476;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,38:40:99:1388,102,0	0/0:14,0:14:42.12:0,42,476	0/0:25,0:21:30.62:0,31,452	0/0:17,0:14:38.06:0,38,386	0/0:42,0:42:99:0,120,1361	0/0:18,0:18:54.15:0,54,612	0/0:18,0:18:54.14:0,54,602	1/1:2,26:28:75.24:1008,75,0	0/0:27,0:27:64.18:0,64,745	0/0:15,0:15:42.12:0,42,476	0/0:20,0:20:57.14:0,57,627	0/0:38,0:38:99:0,114,1292	0/0:22,0:22:60.17:0,60,681	0/0:23,0:23:66.17:0,66,737	0/0:33,0:33:96.27:0,96,1088	0/0:31,0:31:90.26:0,90,1020	0/0:31,0:31:93.24:0,93,1042	0/0:30,0:30:81.19:0,81,903	1/1:2,35:37:99:1416,105,0	1/1:1,31:32:93.20:1196,93,0	0/0:25,0:25:72.18:0,72,805	0/0:25,0:25:75.21:0,75,850	0/0:15,0:15:36.10:0,36,407	0/0:23,0:23:69.16:0,69,768	0/0:33,0:33:93.26:0,93,1054	0/0:24,0:24:66.18:0,66,741	1/1:2,24:26:60.20:821,60,0	0/0:8,0:8:18.05:0,18,204
chr10	83686358	.	A	AAT	19106.59	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-16.158;DP=717;FS=4.577;HRun=0;HaplotypeScore=79.4551;InbreedingCoeff=0.9993;MQ=84.87;MQ0=0;MQRankSum=-5.189;QD=55.38;ReadPosRankSum=-0.691;VQSLOD=4.9456;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,45:45:99:2681,132,0	0/0:10,0:10:30.09:0,30,466	0/0:25,0:25:66.21:0,66,997	0/0:18,0:18:51.05:0,51,690	1/1:1,17:19:48.16:944,48,0	0/0:16,0:16:48.12:0,48,751	0/0:27,0:27:81.28:0,81,1321	1/1:1,46:48:99:2706,141,0	0/0:32,0:32:96.33:0,96,1560	0/0:30,0:30:90.29:0,90,1424	0/0:18,0:18:54.18:0,54,881	0/0:28,0:28:84.29:0,84,1365	1/1:0,24:25:72.25:1462,72,0	1/1:1,27:29:72.25:1462,72,0	0/0:29,0:29:87.30:0,87,1415	0/0:37,0:37:99:0,108,1733	0/0:33,0:33:99:0,99,1549	0/0:24,0:24:66.18:0,66,1025	1/1:1,23:24:69.24:1332,69,0	1/1:0,18:19:51.18:1036,51,0	1/1:0,25:25:72.25:1461,72,0	1/1:0,18:18:48.16:972,48,0	0/0:16,0:16:48.16:0,48,781	0/0:29,0:28:84.29:0,84,1367	1/1:1,24:25:66.23:1318,66,0	1/1:1,20:23:20.26:1199,20,0	1/1:1,24:25:69.24:1377,69,0	1/1:0,20:20:57.20:1158,57,0
chr10	83688669	.	TAG	T	3513.58	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=10.884;DP=655;FS=0.873;HRun=0;HaplotypeScore=99.3554;InbreedingCoeff=0.8860;MQ=86.39;MQ0=0;MQRankSum=-5.315;QD=33.15;ReadPosRankSum=2.796;VQSLOD=5.4690;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,141,2403	0/0:14,0:14:33.11:0,33,571	0/0:27,0:27:70.11:0,70,1118	0/0:28,0:27:60.17:0,60,964	1/1:0,15:15:42.14:559,42,0	0/0:15,0:15:36.12:0,36,624	0/0:34,0:34:90.29:0,90,1529	0/0:42,0:42:99:0,114,1933	0/0:21,0:21:51.16:0,51,856	0/0:27,0:27:72.25:0,72,1228	0/0:11,0:11:24.08:0,24,415	0/0:32,0:32:87.30:0,87,1504	1/1:2,19:21:54.18:719,54,0	1/1:1,24:25:72.24:959,72,0	0/0:28,0:28:69.22:0,69,1160	0/0:16,0:16:45.14:0,45,740	0/0:26,0:25:75.23:0,75,1269	0/0:31,0:31:93.32:0,93,1601	0/0:20,0:20:51.17:0,51,875	0/0:10,0:10:30.10:0,30,519	0/0:25,0:25:72.23:0,72,1220	1/1:1,12:13:27.09:359,27,0	0/0:13,0:13:36.12:0,36,616	0/0:34,0:34:99:0,102,1749	1/1:0,25:25:66.22:878,66,0	0/0:25,0:25:69.23:0,69,1163	0/0:19,0:19:51.14:0,51,822	0/1:7,0:7:38.96:39,0,238
chr10	83688972	.	CTCAG	C	1505.73	PASS	AB=0.537;AC=3;AF=0.054;AN=56;BaseQRankSum=6.967;DP=730;FS=0.668;HRun=0;HaplotypeScore=129.1196;InbreedingCoeff=0.6431;MQ=86.87;MQ0=0;MQRankSum=-3.348;QD=38.61;ReadPosRankSum=0.794;VQSLOD=3.7842;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,129,3360	0/0:10,0:10:27.08:0,27,648	0/0:35,0:35:87.67:0,88,2034	0/0:24,0:24:57.17:0,57,1343	0/0:20,0:20:54.19:0,54,1408	0/0:20,0:20:57.20:0,57,1490	0/0:38,0:38:99:0,105,2706	0/0:28,0:28:69.21:0,69,1610	0/0:28,0:28:69.24:0,69,1759	0/0:27,0:27:72.25:0,72,1882	0/0:9,0:9:27.09:0,27,712	0/0:38,0:38:99:0,99,2544	0/0:31,0:31:84.29:0,84,2191	0/0:20,0:20:48.16:0,48,1251	0/0:39,0:39:96.33:0,96,2495	0/0:21,0:21:54.19:0,54,1423	0/0:29,0:29:78.20:0,78,1926	0/0:23,0:23:66.23:0,66,1701	0/0:14,0:14:39.12:0,39,916	0/0:17,0:17:45.15:0,45,1119	0/0:53,0:53:99:0,141,3531	0/0:17,0:17:39.12:0,39,930	0/0:16,0:16:36.12:0,36,948	0/0:32,0:32:81.28:0,81,2132	0/0:24,0:24:54.12:0,54,1359	0/1:4,25:29:99:1225,0,156	0/0:25,0:25:60.21:0,60,1489	1/1:3,7:10:21.07:385,21,0
chr10	83689522	.	TC	T	1114.76	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.477;DP=628;FS=0.000;HRun=2;HaplotypeScore=67.2564;InbreedingCoeff=0.9954;MQ=77.62;MQ0=0;MQRankSum=-1.603;QD=34.84;ReadPosRankSum=-0.266;VQSLOD=3.7355;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,2173	0/0:9,0:9:27.09:0,27,420	0/0:15,0:15:30.57:0,31,567	0/0:18,0:18:44.01:0,44,589	0/0:15,0:15:36.11:0,36,547	0/0:17,0:17:51.17:0,51,815	0/0:31,0:31:93.30:0,93,1462	0/0:25,0:25:72.24:0,72,1124	0/0:23,0:23:69.22:0,69,1076	0/0:21,0:21:63.21:0,63,1001	0/0:9,0:9:24.08:0,24,381	0/0:42,0:42:99:0,126,1988	0/0:12,0:12:36.12:0,36,575	0/0:24,0:24:69.24:0,69,1103	0/0:31,0:31:93.32:0,93,1484	0/0:21,0:21:63.21:0,63,1004	0/0:33,0:33:99:0,99,1582	0/0:23,0:23:66.22:0,66,1025	0/0:10,0:10:30.06:0,30,431	0/0:15,0:15:42.01:0,42,611	0/0:46,0:46:99:0,138,2191	0/0:14,0:14:42.14:0,42,670	0/0:11,0:11:30.10:0,30,479	0/0:43,0:43:99:0,129,1962	0/0:21,0:21:57.13:0,57,878	1/1:1,23:24:24.24:900,24,0	0/0:18,0:18:54.18:0,54,863	1/1:0,8:8:24.08:336,24,0
chr10	83690193	.	A	AC	12836.58	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-13.938;DP=611;FS=7.512;HRun=3;HaplotypeScore=59.5694;InbreedingCoeff=0.9976;MQ=81.04;MQ0=0;MQRankSum=-3.588;QD=36.68;ReadPosRankSum=3.935;VQSLOD=5.2772;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,34:41:96.32:1332,96,0	1/1:0,8:8:24.08:336,24,0	0/0:21,0:20:48.08:0,48,527	0/0:20,0:20:46.59:0,47,530	1/1:1,11:12:30.07:399,30,0	0/0:21,0:21:60.18:0,60,720	1/1:2,28:30:81.27:1134,81,0	0/0:23,0:23:69.15:0,69,794	0/0:20,0:20:60.18:0,60,720	1/1:4,15:19:57.17:766,57,0	1/1:0,6:6:18.06:252,18,0	0/0:27,0:27:78.21:0,78,911	1/1:1,20:21:60.20:840,60,0	1/1:1,18:19:48.07:647,48,0	1/1:0,26:26:75.25:1050,75,0	1/1:2,19:21:21.19:720,21,0	1/1:3,22:25:63.21:882,63,0	0/0:29,0:29:81.25:0,81,970	0/0:20,0:20:54.12:0,54,620	0/0:13,0:13:30.09:0,30,355	1/1:1,44:45:99:1679,120,0	1/1:0,10:10:27.09:378,27,0	0/0:9,0:9:27.08:0,27,321	0/0:29,0:29:81.19:0,81,943	1/1:1,13:14:33.11:462,33,0	1/1:2,30:32:84.23:1122,84,0	0/0:29,0:29:78.24:0,78,927	1/1:1,20:21:60.20:840,60,0
chr10	83690269	.	GTTTTA	G	3072.95	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=1.172;DP=539;FS=2.356;HRun=0;HaplotypeScore=124.4984;InbreedingCoeff=0.9588;MQ=76.91;MQ0=0;MQRankSum=-5.201;QD=44.54;ReadPosRankSum=-2.332;VQSLOD=3.4410;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.23:0,81,2093	0/0:13,0:13:36.11:0,36,562	0/0:27,0:18:4.13:0,4,440	0/0:31,0:22:40.70:0,41,664	0/0:17,0:17:45.04:0,45,861	0/0:17,0:17:48.16:0,48,1340	0/0:24,0:24:66.18:0,66,1027	1/1:2,14:16:36.04:677,36,0	0/0:20,0:20:60.19:0,60,1579	0/0:20,0:20:57.19:0,57,906	0/0:10,0:10:30.10:0,30,480	0/0:26,0:26:72.19:0,72,1789	0/0:14,0:14:39.11:0,39,831	0/0:18,0:18:48.01:0,48,829	0/0:17,0:17:48.12:0,48,704	0/0:16,0:16:45.12:0,45,670	0/0:17,0:17:48.15:0,48,757	0/0:33,0:33:96.29:0,96,2608	1/1:0,21:21:63.05:1131,63,0	1/1:1,17:18:48.01:863,48,0	0/0:19,0:19:48.13:0,48,1242	0/0:8,0:8:21.04:0,21,390	0/0:19,0:19:48.15:0,48,1324	0/0:21,0:21:60.20:0,60,1628	0/0:13,0:13:39.11:0,39,812	0/0:24,0:24:66.12:0,66,1685	1/1:3,11:14:27.09:562,27,0	0/0:14,0:14:36.12:0,36,1020
chr10	83690274	.	AT	A	2606.02	PASS	AB=0.992;AC=22;AF=0.393;AN=56;BaseQRankSum=7.490;DP=536;FS=3.854;HRun=10;HaplotypeScore=81.7480;InbreedingCoeff=0.7125;MQ=73.79;MQ0=0;MQRankSum=-2.899;QD=10.64;ReadPosRankSum=1.078;VQSLOD=3.1402;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:32:55.06:0,55,820	1/1:1,12:13:32.99:286,33,0	0/1:30,1:17:16.49:16,0,140	0/1:34,0:22:15.34:15,0,211	0/0:7,0:16:31.94:0,32,163	0/0:17,0:17:48.13:0,48,531	1/1:4,18:22:53.98:469,54,0	0/1:14,0:14:3.28:28,0,3	0/0:20,0:21:56.99:0,57,612	1/1:1,19:20:56.99:495,57,0	1/1:0,11:11:32.99:286,33,0	0/0:24,0:24:60.14:0,60,653	0/0:5,0:12:31.53:0,32,176	0/0:8,0:19:43.03:0,43,217	1/1:5,12:17:38.83:326,39,0	1/1:6,10:16:41.96:358,42,0	1/1:1,15:16:44.99:391,45,0	0/0:34,0:34:96.24:0,96,1051	0/1:22,0:22:33.02:47,0,33	1/1:18,0:18:7.10:49,7,0	0/0:17,0:17:42.11:0,42,464	0/0:5,0:8:14.01:0,14,76	0/0:19,0:19:51.12:0,51,550	0/0:20,0:22:60:0,60,645	0/0:3,0:13:36.90:0,37,208	0/0:25,0:25:60.63:0,61,664	1/1:11,0:11:18.11:51,18,0	0/0:12,0:12:36.10:0,36,397
chr10	83692472	.	A	AAC	700.98	PASS	AB=0.874;AC=19;AF=0.365;AN=52;BaseQRankSum=0.072;DP=579;FS=7.355;HRun=0;HaplotypeScore=134.4504;InbreedingCoeff=0.5585;MQ=59.02;MQ0=5;MQRankSum=1.585;QD=2.82;ReadPosRankSum=-1.430;VQSLOD=1.7615;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:11.35:112,11,0	1/1:5,0:5:3.01:38,3,0	./.	0/0:34,0:26:3:0,3,34	0/0:23,0:23:34.24:0,34,178	0/1:18,1:18:16.07:16,0,220	1/1:29,0:28:2.99:23,3,0	0/0:20,0:20:23.86:0,24,223	0/0:23,0:23:32.97:0,33,328	1/1:14,0:14:6.01:67,6,0	./.	0/0:23,0:23:29.57:0,30,268	0/0:23,0:23:33.66:0,34,158	0/0:17,0:17:22.41:0,22,108	1/1:27,0:27:9:92,9,0	1/1:23,1:28:9.47:78,9,0	1/1:17,0:19:3.87:54,4,0	0/1:17,1:19:7.03:7,0,326	0/0:8,0:8:2.84:0,3,14	0/0:17,0:17:23.69:0,24,229	1/1:22,0:27:6.23:54,6,0	0/0:19,0:19:25.57:0,26,124	0/0:12,0:11:14.79:0,15,127	0/0:32,1:34:17.48:0,17,562	0/0:19,0:19:36.93:0,37,182	0/1:16,7:22:28.54:331,0,29	0/0:24,0:24:38.75:0,39,377	0/0:8,0:8:18.05:0,18,201
chr10	83692502	.	CA	C	484	PASS	AB=0.735;AC=5;AF=0.089;AN=56;BaseQRankSum=8.349;DP=648;FS=6.444;HRun=1;HaplotypeScore=139.5919;InbreedingCoeff=-0.0446;MQ=53.29;MQ0=8;MQRankSum=-0.299;QD=4.14;ReadPosRankSum=4.984;VQSLOD=0.5462;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:25.07:0,25,156	0/0:3,0:3:5.97:0,6,54	0/0:32,0:19:44.78:0,45,294	0/0:23,0:19:30.66:0,31,338	0/1:18,9:27:33.39:114,0,33	0/0:24,2:25:20.65:0,21,501	0/0:22,0:21:19.68:0,20,124	0/0:34,1:33:36.61:0,37,529	0/0:22,0:22:59.11:0,59,673	0/0:13,0:13:30.85:0,31,195	0/0:9,0:9:2.78:0,3,14	0/0:22,3:24:2:0,2,429	0/1:18,8:26:82.98:154,0,83	0/1:14,7:21:86.91:94,0,87	0/0:26,0:26:39.40:0,39,229	0/0:26,0:26:51.83:0,52,317	0/0:25,0:24:51.35:0,51,327	0/0:22,2:23:36.32:0,36,638	0/0:11,0:11:20.38:0,20,92	0/0:17,2:19:28.23:0,28,501	0/0:31,0:31:26.60:0,27,179	0/1:12,9:21:26.47:98,0,26	0/0:16,1:16:27.74:0,28,249	0/0:45,1:46:97.87:0,98,1157	0/1:13,9:22:6.22:140,0,6	0/0:29,1:29:62.47:0,62,569	0/0:24,1:25:41.43:0,41,628	0/0:10,1:11:32.60:0,33,368
chr10	83692504	.	CCT	C	1825.25	PASS	AB=0.997;AC=22;AF=0.393;AN=56;BaseQRankSum=2.863;DP=612;FS=3.075;HRun=0;HaplotypeScore=136.0660;InbreedingCoeff=0.0833;MQ=55.78;MQ0=8;MQRankSum=1.487;QD=4.50;ReadPosRankSum=2.411;VQSLOD=3.1380;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:23:6.09:0,6,26	0/0:3,0:3:4.76:0,5,28	0/1:31,0:21:2.83:3,0,105	0/1:23,0:19:45.33:45,0,79	1/1:14,11:25:13.76:357,14,0	0/1:26,0:25:40.58:41,0,232	0/0:15,0:14:9.61:0,10,47	0/1:33,0:32:32.32:32,0,158	0/0:21,0:21:39.40:0,39,414	0/0:11,0:11:0.60:0,1,61	0/0:9,0:9:1.77:0,2,4	0/1:26,0:25:63.46:63,0,222	1/1:26,0:26:38.08:395,38,0	1/1:21,0:21:15.06:238,15,0	0/0:24,0:24:15.31:0,15,61	0/0:20,0:20:19.91:0,20,88	0/0:20,0:20:13.02:0,13,60	0/1:25,0:24:19.30:19,0,345	0/1:10,0:10:9.13:10,0,9	0/1:20,0:20:48.70:49,0,231	0/1:26,0:26:32.20:32,0,36	1/1:21,0:21:23.61:320,24,0	0/1:16,0:15:0.30:0,0,100	0/0:47,0:47:29.87:0,30,595	1/1:21,0:21:32.44:358,32,0	0/1:30,0:29:9.69:10,0,168	0/1:25,0:25:25.63:26,0,308	0/0:11,0:11:20.23:0,20,213
chr10	83692786	.	G	GA	2669.66	PASS	AC=28;AF=0.700;AN=40;BaseQRankSum=4.448;DP=337;FS=5.562;HRun=6;HaplotypeScore=102.6339;InbreedingCoeff=0.8432;MQ=36.45;MQ0=36;MQRankSum=-3.828;QD=13.09;ReadPosRankSum=-3.140;VQSLOD=2.2567;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,7:22:21.09:221,21,0	1/1:3,5:7:6.02:75,6,0	./.	./.	./.	0/0:24,0:21:30.03:0,30,295	1/1:7,4:10:8.99:95,9,0	1/1:11,5:12:21.49:242,21,0	0/0:18,0:18:23.83:0,24,244	1/1:9,3:12:3.63:153,4,0	1/1:5,1:5:2.98:21,3,0	0/0:16,0:15:17.91:0,18,183	./.	./.	1/1:7,9:15:30.42:331,30,0	1/1:10,10:19:8.94:318,9,0	1/1:7,6:11:23.62:238,24,0	0/0:24,0:17:23.94:0,24,244	1/1:11,6:10:24.06:285,24,0	1/1:12,7:19:20.77:198,21,0	./.	./.	0/0:19,0:18:27.01:0,27,275	0/0:22,0:16:11.94:0,12,122	./.	1/1:10,7:14:24.03:281,24,0	1/1:7,10:16:24.08:301,24,0	1/1:6,3:5:6.02:75,6,0
chr10	83693658	.	TG	T	1424.52	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=-4.331;DP=281;FS=5.508;HRun=8;HaplotypeScore=104.1048;InbreedingCoeff=0.8873;MQ=91.10;MQ0=0;MQRankSum=-0.277;QD=15.32;ReadPosRankSum=-0.873;VQSLOD=3.3391;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:8.97:77,9,0	0/0:8,0:8:21:0,21,236	0/0:16,0:15:29.73:0,30,347	0/0:30,0:27:20.31:0,20,396	1/1:0,8:8:9.01:87,9,0	0/0:15,0:15:38.97:0,39,435	0/0:19,0:19:48.08:0,48,563	1/1:4,20:24:60.09:577,60,0	0/0:8,0:8:15.05:0,15,182	0/0:9,0:9:12.04:0,12,145	0/0:8,0:8:18.02:0,18,203	0/0:12,0:12:33.05:0,33,380	1/1:0,6:6:6.01:58,6,0	1/1:0,11:11:12.02:115,12,0	0/0:10,0:10:21.02:0,21,240	0/0:10,0:10:27.08:0,27,325	0/0:9,0:9:11.99:0,12,127	0/0:3,0:3:9.03:0,9,108	1/1:3,9:12:27.04:261,27,0	1/1:1,8:9:15.02:145,15,0	./.	1/1:1,5:6:8.97:77,9,0	0/0:9,0:9:27.08:0,27,323	0/0:5,0:5:11.95:0,12,125	1/1:0,6:6:6.01:58,6,0	0/0:14,0:14:39.12:0,39,473	1/1:0,6:6:18.03:172,18,0	0/0:3,0:3:6.02:0,6,72
chr10	83695883	.	CTGGGGCGCCGGACGCTGAAAA	C	99.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.681;DP=463;FS=4.771;HRun=0;HaplotypeScore=236.4333;InbreedingCoeff=0.5492;MQ=75.06;MQ0=0;MQRankSum=-1.605;QD=3.11;ReadPosRankSum=0.119;VQSLOD=2.5831;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.27:0,90,7765	0/0:4,0:4:12.04:0,12,799	0/0:9,0:9:21.07:0,21,946	0/0:12,0:12:36.12:0,36,1852	0/0:7,0:7:18.06:0,18,1746	0/0:17,0:17:51.18:0,51,4138	0/0:43,0:43:99:0,123,10474	0/0:16,0:16:45.15:0,45,3405	0/0:14,0:14:39.13:0,39,3258	0/0:11,0:11:33.11:0,33,2944	0/0:4,0:4:6.02:0,6,601	0/0:20,0:20:57.20:0,57,4544	0/0:15,0:15:45.15:0,45,3896	0/0:20,0:20:51.18:0,51,4416	0/0:18,0:17:54.19:0,54,4443	0/0:10,0:10:30.10:0,30,2267	0/0:36,0:36:99:0,105,9751	0/0:26,0:26:75.26:0,75,6812	0/0:18,0:18:54.14:0,54,3916	0/0:4,0:4:12.04:0,12,1154	1/1:16,16:32:3.01:177,3,0	0/0:13,0:13:36.04:0,36,2649	0/0:9,0:9:27.09:0,27,2028	0/0:24,0:24:63.21:0,63,5622	0/0:16,0:16:48.16:0,48,4047	0/0:21,0:20:60.21:0,60,4788	0/0:9,0:9:27.09:0,27,2611	0/0:2,0:2:3.01:0,3,303
chr10	83696132	.	TGA	T	115.52	PASS	AB=0.892;AC=6;AF=0.125;AN=48;BaseQRankSum=-0.483;DP=425;FS=0.000;HRun=0;HaplotypeScore=64.6850;InbreedingCoeff=-0.0044;MQ=72.74;MQ0=10;MQRankSum=1.840;QD=1.41;ReadPosRankSum=-0.231;VQSLOD=0.8311;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:30.04:0,30,340	0/0:9,0:9:6.02:0,6,85	./.	0/0:25,0:11:0:0,0,0	0/0:9,0:7:3.01:0,3,42	1/1:14,0:14:2.99:24,3,0	0/0:22,0:22:8.92:0,9,62	0/0:18,0:18:12.04:0,12,156	0/1:10,1:11:23.30:23,0,76	0/0:11,0:11:3.01:0,3,34	0/0:16,0:16:6:0,6,68	0/0:11,0:11:3:0,3,25	0/0:12,0:11:3.44:0,3,21	0/0:13,0:13:5.46:0,5,29	0/1:16,0:16:12.25:12,0,80	0/1:16,0:17:23.37:23,0,97	0/1:14,10:24:23.54:141,0,24	0/0:22,0:32:21.02:0,21,255	./.	./.	0/0:7,0:6:2.90:0,3,16	0/0:9,0:9:5.97:0,6,46	./.	0/0:13,0:13:11.99:0,12,103	0/0:13,0:10:2.92:0,3,17	0/0:24,0:24:35.65:0,36,386	0/0:21,0:21:24.06:0,24,170	0/0:3,0:3:2.98:0,3,21
chr10	83696544	.	T	TTGTCTC	3503.36	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.129;DP=740;FS=2.400;HRun=0;HaplotypeScore=161.8299;InbreedingCoeff=0.9730;MQ=59.63;MQ0=4;MQRankSum=-7.688;QD=30.73;ReadPosRankSum=-1.344;VQSLOD=3.4950;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,132,2426	0/0:9,0:9:18.06:0,18,383	0/0:33,0:20:11.16:0,11,195	0/0:38,0:29:35.98:0,36,452	1/1:7,16:22:17.98:270,18,0	0/0:27,0:27:69.19:0,69,1226	0/0:29,0:29:75.24:0,75,1463	0/0:28,0:28:36.11:0,36,614	0/0:29,0:29:72.22:0,72,1319	0/0:31,0:31:78.21:0,78,1441	0/0:19,0:19:45.13:0,45,845	0/0:33,0:33:72.22:0,72,1369	1/1:12,13:25:62.80:1485,63,0	1/1:16,8:24:42.08:872,42,0	0/0:33,0:33:72.20:0,72,1345	0/0:23,0:23:51.14:0,51,921	0/0:25,0:25:48.40:0,48,1140	0/0:29,0:29:68.05:0,68,1263	0/0:26,0:25:54.17:0,54,971	0/0:14,0:14:30.04:0,30,483	0/0:27,0:27:12:0,12,185	1/1:21,3:24:39.11:698,39,0	0/0:12,0:12:33.10:0,33,628	0/0:36,0:36:93.31:0,93,1864	1/1:14,2:16:12.04:179,12,0	0/0:30,0:30:78.23:0,78,1466	0/0:22,0:22:42.14:0,42,838	0/0:22,0:22:45.13:0,45,844
chr10	83696572	.	G	GTGTCTC	2290.55	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.656;DP=734;FS=8.869;HRun=0;HaplotypeScore=167.5148;InbreedingCoeff=0.9424;MQ=56.09;MQ0=13;MQRankSum=-9.973;QD=17.76;ReadPosRankSum=-3.108;VQSLOD=2.2373;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,126,2507	0/0:8,0:8:5.99:0,6,48	0/0:31,0:9:14.94:0,15,171	0/0:38,0:21:9.08:0,9,110	1/1:12,3:13:8.94:105,9,0	0/0:23,0:23:48.15:0,48,889	0/0:29,0:29:60.17:0,60,1135	0/0:30,0:29:58.05:0,58,1075	0/0:35,0:35:88.49:0,88,1718	0/0:33,0:32:78.26:0,78,1557	0/0:14,0:14:36.09:0,36,676	0/0:26,0:26:60.18:0,60,1168	1/1:12,16:29:50.67:875,51,0	1/1:9,9:19:32.56:523,33,0	0/0:32,0:32:78.22:0,78,1479	0/0:17,0:17:42.08:0,42,736	0/0:32,0:32:84.26:0,84,1646	0/0:31,0:31:69.24:0,69,1419	0/0:30,0:24:51.14:0,51,944	0/0:16,0:15:33.10:0,33,622	1/1:5,18:24:11.49:220,11,0	1/1:13,10:25:20.86:382,21,0	0/0:17,0:17:39.09:0,39,727	0/0:44,0:44:93.25:0,93,1828	1/1:12,4:15:18.87:368,19,0	0/0:34,0:34:81.17:0,81,1532	0/0:20,0:20:42.09:0,42,774	0/0:10,0:10:24.08:0,24,511
chr10	83696865	.	CT	C	6100.64	PASS	AB=0.917;AC=27;AF=0.482;AN=56;BaseQRankSum=-1.456;DP=670;FS=19.554;HRun=10;HaplotypeScore=143.1698;InbreedingCoeff=0.8782;MQ=64.07;MQ0=2;MQRankSum=4.723;QD=17.38;ReadPosRankSum=1.909;VQSLOD=3.8162;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:43:63.98:195,64,0	1/1:0,13:13:32.99:286,33,0	0/1:19,2:13:40.63:41,0,101	0/0:15,0:10:15.01:0,15,147	0/0:26,0:26:37.93:0,38,178	0/0:16,0:16:45.11:0,45,490	1/1:0,14:14:38.99:339,39,0	1/1:9,23:32:73.99:631,74,0	0/0:17,1:19:18.87:0,19,401	1/1:4,26:30:74.98:651,75,0	1/1:3,14:17:2.77:295,3,0	0/0:24,0:24:66.17:0,66,721	0/0:19,0:19:45.87:0,46,200	0/0:26,0:26:60.77:0,61,262	1/1:3,26:29:65.92:565,66,0	1/1:3,24:27:62.88:547,63,0	1/1:3,26:29:74.98:651,75,0	0/0:27,0:29:75.01:0,75,798	1/1:6,14:20:47.96:412,48,0	1/1:5,14:19:38.97:338,39,0	1/1:4,22:26:15.47:425,15,0	0/0:25,0:25:50.55:0,51,225	0/0:26,0:26:44.66:0,45,674	0/0:15,0:15:39.10:0,39,424	0/0:22,0:22:36.26:0,36,158	0/0:40,1:41:46.11:0,46,918	1/1:5,25:30:83.97:725,84,0	0/0:15,1:16:3.99:0,4,259
chr10	83696868	.	T	TTG	4279.50	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.910;DP=665;FS=0.407;HRun=0;HaplotypeScore=165.5382;InbreedingCoeff=0.9957;MQ=61.58;MQ0=3;MQRankSum=-11.546;QD=37.21;ReadPosRankSum=-0.759;VQSLOD=5.7624;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:95.65:0,96,753	0/0:13,0:13:35.86:0,36,288	0/0:22,0:12:32.65:0,33,340	0/0:14,0:8:15.05:0,15,201	1/1:8,17:25:38.10:740,38,0	0/0:16,0:16:48.15:0,48,696	0/0:17,0:17:41.96:0,42,352	0/0:33,0:33:92.94:0,93,799	0/0:18,0:18:53.69:0,54,679	0/0:31,0:31:86.91:0,87,738	0/0:16,0:16:47.62:0,48,421	0/0:22,0:22:66.22:0,66,990	1/1:8,11:19:51.03:792,51,0	1/1:2,25:27:72.16:1190,72,0	0/0:31,0:31:74.90:0,75,627	0/0:25,0:25:65.73:0,66,553	0/0:30,0:30:80.91:0,81,676	0/0:28,0:28:80.48:0,80,1120	0/0:22,0:21:62.93:0,63,532	0/0:18,0:18:50.88:0,51,414	0/0:26,0:26:62.96:0,63,565	1/1:5,18:24:23.84:857,24,0	0/0:27,0:27:81.20:0,81,1119	0/0:15,0:15:45.12:0,45,629	1/1:4,16:20:44.81:700,45,0	0/0:42,0:42:99:0,123,1628	0/0:30,0:30:86.74:0,87,730	0/0:14,0:14:42.06:0,42,531
chr10	83696876	.	GT	G	888.05	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=15.291;DP=687;FS=2.328;HRun=10;HaplotypeScore=163.0751;InbreedingCoeff=0.9916;MQ=61.06;MQ0=3;MQRankSum=-13.375;QD=8.07;ReadPosRankSum=-0.030;VQSLOD=0.6841;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,114,1211	0/0:15,0:15:35.31:0,35,302	0/0:26,0:12:12.95:0,13,154	0/0:17,0:11:17.93:0,18,192	1/1:3,20:23:43.97:214,44,0	0/0:15,0:15:45.15:0,45,628	0/0:19,0:19:54:0,54,518	0/0:36,0:36:92.34:0,92,813	0/0:15,0:15:42.12:0,42,555	0/0:35,0:35:91.72:0,92,972	0/0:18,0:18:44.88:0,45,412	0/0:24,0:24:69.23:0,69,953	1/1:7,12:19:40.69:197,41,0	1/1:3,23:26:61.96:257,62,0	0/0:35,0:35:64.74:0,65,753	0/0:25,0:25:68.22:0,68,570	0/0:31,0:31:89.59:0,90,760	0/0:27,0:27:73.49:0,73,1001	0/0:23,0:22:62.48:0,62,590	0/0:17,0:17:28.12:0,28,321	0/0:28,0:28:68.06:0,68,590	1/1:3,21:24:50.51:228,51,0	0/0:27,0:27:72.23:0,72,982	0/0:18,0:18:54.14:0,54,729	1/1:2,16:18:36.42:168,36,0	0/0:38,0:38:99:0,107,1406	0/0:31,0:31:48.47:0,48,552	0/0:11,0:11:24.95:0,25,320
chr10	83696884	.	T	TG	3165.98	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=15.825;DP=709;FS=1.262;HRun=0;HaplotypeScore=162.6636;InbreedingCoeff=0.9855;MQ=62.98;MQ0=3;MQRankSum=-12.403;QD=28.27;ReadPosRankSum=0.671;VQSLOD=3.2369;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:99:0,123,1647	0/0:14,0:14:39.13:0,39,545	0/0:33,0:16:24.16:0,24,220	0/0:18,0:11:8.89:0,9,182	1/1:1,18:19:50.94:515,51,0	0/0:14,0:14:42.14:0,42,587	0/0:18,0:18:51.17:0,51,713	0/0:37,0:37:89.50:0,90,1213	0/0:17,0:17:48.14:0,48,637	0/0:33,0:33:93.28:0,93,1231	0/0:19,0:19:54.17:0,54,726	0/0:25,0:25:75.20:0,75,968	1/1:3,22:25:71.85:798,72,0	1/1:1,26:27:79.02:901,79,0	0/0:34,0:34:90.29:0,90,1231	0/0:29,0:29:78.24:0,78,1045	0/0:34,0:34:99:0,102,1319	0/0:28,0:28:81.18:0,81,1070	0/0:22,0:21:63.14:0,63,823	0/0:18,0:18:51.14:0,51,687	0/0:30,0:30:78.17:0,78,1014	1/1:2,23:25:65.93:696,66,0	0/0:29,0:29:81.24:0,81,1095	0/0:20,0:20:60.16:0,60,816	1/1:0,16:16:39.06:432,39,0	0/0:39,0:39:99:0,111,1505	0/0:31,0:31:90.28:0,90,1221	0/0:9,0:9:27.09:0,27,375
chr10	83696891	.	T	TG	3876.93	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=15.262;DP=704;FS=0.000;HRun=0;HaplotypeScore=157.5551;InbreedingCoeff=0.9944;MQ=63.60;MQ0=4;MQRankSum=-13.010;QD=35.24;ReadPosRankSum=2.149;VQSLOD=3.0954;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:99:0,129,1696	0/0:15,0:15:45.10:0,45,604	0/0:36,0:18:34.15:0,34,329	0/0:19,0:12:14.12:0,14,148	1/1:2,17:19:48.01:562,48,0	0/0:14,0:14:42.11:0,42,541	0/0:22,0:22:60.17:0,60,787	0/0:38,0:38:98:0,98,1235	0/0:16,0:16:48.15:0,48,645	0/0:30,0:30:87.26:0,87,1148	0/0:21,0:21:60.18:0,60,805	0/0:23,0:23:69.22:0,69,942	1/1:3,24:27:81.14:970,81,0	1/1:2,24:26:78.24:1092,78,0	0/0:34,0:34:93.25:0,93,1220	0/0:29,0:29:81.23:0,81,1070	0/0:33,0:33:99:0,99,1333	0/0:29,0:29:87.26:0,87,1194	0/0:19,0:18:53.89:0,54,674	0/0:18,0:18:51.15:0,51,637	0/0:29,0:29:75.23:0,75,1011	1/1:2,21:23:63.09:812,63,0	0/0:29,0:29:87.24:0,87,1151	0/0:22,0:22:63.19:0,63,847	1/1:1,14:15:33.09:440,33,0	0/0:35,0:35:99:0,102,1397	0/0:30,0:30:87.24:0,87,1147	0/0:7,0:7:21.06:0,21,275
chr10	83696895	.	G	GTT	3012.75	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=8.368;DP=692;FS=2.663;HRun=10;HaplotypeScore=169.0368;InbreedingCoeff=0.8418;MQ=65.01;MQ0=4;MQRankSum=-8.201;QD=13.10;ReadPosRankSum=-1.631;VQSLOD=0.1827;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:43:98.67:0,99,1040	0/0:14,0:15:29.74:0,30,342	0/0:39,0:19:18.80:0,19,259	0/1:20,0:13:5.01:5,0,72	0/1:12,0:19:4.06:122,0,4	0/0:14,0:14:33.88:0,34,320	0/0:21,0:22:38.62:0,39,425	1/1:15,15:33:50.58:624,51,0	0/0:15,0:15:33:0,33,330	0/0:29,0:29:57.04:0,57,575	0/0:21,0:21:54.07:0,54,542	0/0:23,0:23:57.03:0,57,551	1/1:16,0:28:17.41:268,17,0	1/1:21,0:26:26.61:331,27,0	0/0:34,0:34:74.91:0,75,736	0/0:26,0:27:50.60:0,51,571	0/0:31,0:32:77.72:0,78,739	0/0:29,0:29:63.09:0,63,640	1/1:9,7:17:35.50:378,35,0	1/1:9,8:18:39.11:524,39,0	0/0:25,0:26:53.43:0,53,506	1/1:18,0:24:6.51:242,7,0	0/0:25,0:26:64.82:0,65,615	0/0:22,0:23:62.82:0,63,603	1/1:13,0:15:6.06:112,6,0	0/0:35,0:36:75.71:0,76,813	1/1:17,11:28:26.51:608,27,0	0/0:7,0:7:17.98:0,18,168
chr10	83696898	.	T	TG	1046.66	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=12.895;DP=683;FS=2.616;HRun=0;HaplotypeScore=156.6131;InbreedingCoeff=0.8179;MQ=66.76;MQ0=3;MQRankSum=-8.946;QD=8.24;ReadPosRankSum=2.853;VQSLOD=3.5785;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:99:0,114,1531	0/0:15,0:15:38.87:0,39,527	0/0:40,0:21:41.04:0,41,396	0/1:22,0:13:28.81:29,0,82	1/1:7,10:17:0.53:120,1,0	0/0:14,0:14:39.10:0,39,510	0/0:22,0:22:56.93:0,57,739	0/0:32,0:32:70.34:0,70,551	0/0:17,0:17:51.02:0,51,600	0/0:28,0:28:81.22:0,81,1021	0/0:20,0:20:60.18:0,60,806	0/0:23,0:23:66.09:0,66,858	1/1:17,9:26:31.85:319,32,0	1/1:8,15:24:35.17:351,35,0	0/0:33,0:33:90.12:0,90,1151	0/0:29,0:29:69.74:0,70,923	0/0:32,0:32:96.18:0,96,1212	0/0:29,0:29:87.08:0,87,1056	0/0:18,0:17:35.09:0,35,302	0/0:18,0:18:41.16:0,41,221	0/0:25,0:25:66.11:0,66,828	1/1:11,13:24:23.48:258,23,0	0/0:25,0:25:75.14:0,75,963	0/0:22,0:22:66.17:0,66,881	1/1:5,9:14:11.41:137,11,0	0/0:37,0:37:99:0,104,1345	0/0:26,0:26:61.62:0,62,437	0/0:7,0:7:21.06:0,21,274
chr10	83696900	.	T	TTG	2324.16	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=13.123;DP=678;FS=0.000;HRun=0;HaplotypeScore=160.5169;InbreedingCoeff=0.6220;MQ=68.92;MQ0=3;MQRankSum=-10.751;QD=11.98;ReadPosRankSum=1.612;VQSLOD=3.0988;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:99:0,117,1622	0/0:15,0:15:44.72:0,45,589	0/0:42,0:24:26.87:0,27,453	0/0:22,0:13:18.53:0,19,196	1/1:7,10:17:26.10:237,26,0	0/0:15,0:15:42.11:0,42,569	0/0:19,0:19:53.75:0,54,727	0/1:27,0:27:99:164,0,104	0/0:18,0:18:54.05:0,54,663	0/0:30,0:30:81.21:0,81,1069	0/0:20,0:20:60.19:0,60,859	0/0:24,0:24:66.16:0,66,919	1/1:18,8:26:61.20:541,61,0	1/1:10,15:25:66.44:586,66,0	0/0:32,0:32:87.19:0,87,1201	0/0:26,0:26:71.69:0,72,966	0/0:31,0:31:93.21:0,93,1256	0/0:28,0:28:75.18:0,75,1035	0/1:19,0:18:66.87:67,0,83	0/1:16,0:16:7.49:182,0,7	0/0:24,0:24:63.16:0,63,855	1/1:11,13:24:47.23:402,47,0	0/0:26,0:26:75.16:0,75,1021	0/0:23,0:23:66.20:0,66,942	1/1:5,9:14:9.23:170,9,0	0/0:39,0:39:99:0,102,1384	0/1:26,0:26:99:160,0,160	0/0:7,0:7:21.06:0,21,290
chr10	83697231	.	G	GCC	1205.16	PASS	AB=0.569;AC=24;AF=0.429;AN=56;BaseQRankSum=-0.833;DP=450;FS=2.679;HRun=10;HaplotypeScore=69.2438;InbreedingCoeff=0.7595;MQ=78.22;MQ0=1;MQRankSum=-0.239;QD=8.09;ReadPosRankSum=-4.413;VQSLOD=-0.4191;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:7,3:19:11.01:102,11,0	0/0:7,0:7:14.98:0,15,152	0/0:32,0:27:44.55:0,45,396	0/0:21,0:17:26.66:0,27,243	1/1:1,1:8:9.02:111,9,0	0/0:12,0:12:30.04:0,30,299	0/0:23,0:24:45.19:0,45,432	1/1:15,7:24:19.98:178,20,0	0/0:18,0:18:45.08:0,45,457	0/0:14,0:14:23.99:0,24,237	0/0:15,0:15:29.99:0,30,298	0/0:21,0:21:54.05:0,54,536	1/1:3,0:6:3:29,3,0	1/1:12,0:12:18.01:190,18,0	0/0:32,0:34:77.79:0,78,747	0/0:23,0:24:56.80:0,57,547	0/0:19,0:20:50.80:0,51,493	0/0:15,0:15:33.05:0,33,335	1/1:7,6:13:18.02:226,18,0	1/1:1,6:7:17.93:186,18,0	1/1:7,7:16:9.51:101,10,0	1/1:5,4:9:2.52:45,3,0	0/0:15,0:16:36.05:0,36,366	0/0:27,0:27:57.04:0,57,572	1/1:5,0:5:6:52,6,0	0/1:2,0:7:14.54:15,0,20	1/1:4,6:13:10.89:107,11,0	0/1:2,1:10:12.02:70,0,12
chr10	83698282	.	TCCCTG	T	9103.36	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.249;DP=795;FS=2.863;HRun=0;HaplotypeScore=157.1474;InbreedingCoeff=0.9995;MQ=87.02;MQ0=0;MQRankSum=-6.402;QD=55.51;ReadPosRankSum=2.097;VQSLOD=5.4452;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,178,5500	0/0:8,0:8:24.08:0,24,738	0/0:31,0:31:85.43:0,85,2601	0/0:30,0:30:84.12:0,84,2234	1/1:2,17:19:45.04:871,45,0	0/0:30,0:30:90.31:0,90,2841	0/0:26,0:26:66.23:0,66,2094	0/0:32,0:32:84.26:0,84,2384	0/0:30,0:30:90.30:0,90,2784	0/0:24,0:24:72.24:0,72,2192	0/0:22,0:22:63.22:0,63,1972	0/0:34,0:34:99:0,99,3081	1/1:2,23:25:63.22:1367,63,0	1/1:0,35:35:99:2148,99,0	0/0:40,0:40:99:0,120,3669	0/0:44,0:44:99:0,129,3974	0/0:30,0:30:87.30:0,87,2758	0/0:22,0:22:66.23:0,66,2094	0/0:28,0:28:84.28:0,84,2524	0/0:27,0:27:78.27:0,78,2472	1/1:2,32:34:87.21:1795,87,0	1/1:0,25:25:75.26:1624,75,0	0/0:15,0:15:45.15:0,45,1378	0/0:38,0:38:99:0,114,3547	1/1:3,23:26:60.21:1297,60,0	0/0:25,0:25:75.23:0,75,2175	0/0:24,0:24:69.24:0,69,2185	0/0:11,0:11:33.11:0,33,1037
chr10	83698433	.	CTCCT	C	9697.54	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.618;DP=842;FS=0.993;HRun=0;HaplotypeScore=142.8114;InbreedingCoeff=0.9968;MQ=81.99;MQ0=1;MQRankSum=-2.967;QD=45.96;ReadPosRankSum=3.703;VQSLOD=5.5371;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:71,0:71:99:0,193,4978	1/1:0,6:6:15.05:285,15,0	0/0:30,0:30:61.49:0,61,1707	0/0:20,0:20:51.16:0,51,1121	0/0:29,0:29:75.26:0,75,1971	0/0:29,0:29:84.29:0,84,2224	1/1:1,27:28:60.21:1139,60,0	0/0:28,0:28:75.26:0,75,1973	0/0:24,0:24:69.24:0,69,1861	1/1:3,36:39:99:2016,108,0	1/1:1,10:11:27.09:512,27,0	0/0:32,0:32:96.32:0,96,2496	0/0:28,0:28:75.21:0,75,1951	0/0:40,0:40:99:0,120,3086	1/1:4,38:41:96.33:1823,96,0	1/1:2,36:38:99:1987,105,0	1/1:4,43:46:99:1937,102,0	0/0:26,0:26:75.26:0,75,2008	0/0:25,0:25:75.26:0,75,2007	0/0:20,0:20:54.19:0,54,1397	0/0:40,0:40:99:0,102,2739	0/0:35,0:35:99:0,105,2824	0/0:24,0:24:72.25:0,72,1942	0/0:38,0:38:99:0,105,2808	0/0:23,0:23:69.24:0,69,1843	0/0:30,0:30:90.31:0,90,2399	0/0:29,0:28:87.30:0,87,2325	0/0:10,0:10:30.10:0,30,789
chr10	83699169	.	GAT	G	4035.73	PASS	AB=0.739;AC=34;AF=0.630;AN=54;BaseQRankSum=-3.406;DP=460;FS=3.239;HRun=0;HaplotypeScore=74.3271;InbreedingCoeff=0.7906;MQ=76.12;MQ0=11;MQRankSum=-1.058;QD=15.00;ReadPosRankSum=0.655;VQSLOD=3.0174;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:27:20.63:245,21,0	1/1:8,0:8:20.96:172,21,0	0/0:27,0:24:56.15:0,56,599	0/0:25,0:12:33:0,33,313	1/1:19,0:19:8.63:47,9,0	0/0:22,0:22:60.52:0,61,574	1/1:16,0:16:35.96:299,36,0	1/1:23,0:23:63.50:575,64,0	0/0:20,0:20:23.81:0,24,460	1/1:17,0:17:27.92:325,28,0	1/1:8,0:8:23.97:199,24,0	0/0:19,0:19:44.53:0,45,365	1/1:10,0:9:2.84:18,3,0	1/1:7,0:7:11.96:92,12,0	1/1:18,0:18:43.12:327,43,0	1/1:24,0:24:54.86:452,55,0	0/1:16,2:18:32.12:199,0,32	0/0:15,0:14:30.88:0,31,366	1/1:17,0:14:36.02:324,36,0	1/1:1,10:11:8.56:46,9,0	0/0:21,0:19:29.07:0,29,210	./.	0/0:13,0:13:35.23:0,35,345	0/0:16,0:15:32.77:0,33,360	1/1:12,0:10:20.95:169,21,0	1/1:15,1:16:37.98:361,38,0	0/1:3,8:11:13.95:50,0,14	1/1:6,1:6:14.95:134,15,0
chr10	83699170	.	A	ATC	962.16	PASS	AB=0.987;AC=19;AF=0.352;AN=54;BaseQRankSum=3.650;DP=473;FS=6.103;HRun=0;HaplotypeScore=93.1142;InbreedingCoeff=0.5567;MQ=73.49;MQ0=12;MQRankSum=-2.133;QD=5.53;ReadPosRankSum=-1.846;VQSLOD=1.5068;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:27:15.81:0,16,65	1/1:8,0:8:2.90:25,3,0	0/0:26,0:23:63.10:0,63,914	0/0:24,0:11:33.11:0,33,479	1/1:2,18:20:8.68:129,9,0	0/0:24,0:24:63.04:0,63,927	1/1:17,0:17:7.52:54,8,0	0/0:23,0:23:2:0,2,6	0/0:20,0:20:54.14:0,54,757	0/1:17,0:17:1.71:39,0,2	0/0:8,0:8:0:0,0,0	0/0:17,0:17:45.15:0,45,646	1/1:2,9:10:6.02:74,6,0	1/1:8,1:9:16.11:195,16,0	1/1:18,0:18:3.64:70,4,0	0/1:24,1:25:15.50:141,0,16	0/0:19,0:19:6:0,6,78	0/0:15,0:14:39.11:0,39,537	1/1:17,0:14:2.16:26,2,0	0/0:12,0:12:3.26:0,3,10	0/0:21,0:19:29.80:0,30,409	./.	0/0:14,0:14:36.12:0,36,517	0/0:16,0:15:34.66:0,35,479	1/1:14,0:12:21.07:338,21,0	0/1:18,0:18:6.95:42,0,7	0/0:11,0:11:5.73:0,6,34	0/0:8,0:6:2.26:0,2,12
chr10	83699219	.	T	TCTCCCC	182.41	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=2.693;DP=413;FS=2.335;HRun=0;HaplotypeScore=111.4137;InbreedingCoeff=0.4300;MQ=48.93;MQ0=24;MQRankSum=-1.906;QD=1.96;ReadPosRankSum=-4.488;VQSLOD=0.7867;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:17.89:0,18,281	0/0:2,0:2:6.02:0,6,71	0/0:36,0:8:8.45:0,8,155	0/0:58,0:9:11.61:0,12,118	1/1:11,0:10:1.82:5,2,0	0/0:13,0:15:24.08:0,24,458	0/1:12,0:12:15.28:15,0,49	0/0:28,0:27:50.48:0,50,804	0/0:17,0:17:33.10:0,33,538	0/1:11,0:11:19.48:19,0,282	0/0:8,0:8:12.51:0,13,187	0/0:10,0:11:19.28:0,19,295	1/1:6,0:7:11.98:144,12,0	1/1:3,5:13:5.97:58,6,0	0/1:16,0:16:10.64:11,0,486	0/1:12,0:11:0.53:1,0,103	0/0:19,0:19:29.59:0,30,469	0/0:14,0:14:32.97:0,33,538	0/0:11,0:7:18.02:0,18,234	0/0:8,0:7:8.93:0,9,130	0/1:6,0:6:0.09:0,0,0	./.	0/0:7,0:7:8.93:0,9,193	0/0:23,0:21:31.88:0,32,557	1/1:4,0:4:5.89:69,6,0	0/0:14,0:14:30.56:0,31,414	0/0:9,0:9:15.05:0,15,264	0/0:12,0:9:15.05:0,15,224
chr10	83699239	.	C	CT	1164.87	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-0.496;DP=548;FS=0.971;HRun=17;HaplotypeScore=119.4919;InbreedingCoeff=0.4486;MQ=54.35;MQ0=20;MQRankSum=-0.613;QD=2.78;ReadPosRankSum=-0.632;VQSLOD=0.0168;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:23:13.80:71,14,0	0/1:9,0:9:3.76:4,0,8	0/1:58,0:13:13.17:13,0,20	0/0:72,0:16:6.03:0,6,24	0/0:6,0:8:0.79:0,1,3	1/1:14,0:15:3.29:24,3,0	1/1:10,5:18:10.60:62,11,0	1/1:20,0:20:6.81:26,7,0	1/1:17,0:17:3.37:10,3,0	1/1:10,8:18:7.98:48,8,0	1/1:11,0:11:12.72:81,13,0	1/1:13,0:14:0.47:2,0,0	0/1:5,0:5:0:0,0,0	0/1:13,0:13:1.22:2,0,1	1/1:23,1:25:26.81:165,27,0	1/1:17,0:17:19.98:126,20,0	1/1:11,5:23:0.47:1,0,0	0/0:20,0:20:5.10:0,5,24	1/1:20,0:20:37.99:186,38,0	1/1:16,0:16:27.57:124,28,0	1/1:5,0:10:0.16:0,0,0	0/0:6,0:5:5.04:0,5,17	0/0:14,0:14:7.71:0,8,41	0/1:25,0:25:9.27:33,0,9	0/0:3,0:6:3.23:0,3,10	1/1:21,0:19:17.77:104,18,0	1/1:23,0:23:35.35:176,35,0	1/1:9,5:13:8.77:54,9,0
chr10	83699945	.	T	TAA	2171.66	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-1.702;DP=549;FS=3.578;HRun=11;HaplotypeScore=79.6605;InbreedingCoeff=0.9387;MQ=73.15;MQ0=1;MQRankSum=-0.912;QD=19.56;ReadPosRankSum=-1.063;VQSLOD=2.8344;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:45:95.86:0,96,980	0/0:4,0:4:9.01:0,9,87	0/0:31,0:26:32.58:0,33,393	0/0:22,0:20:22.28:0,22,162	1/1:7,20:29:61.68:717,62,0	0/0:18,0:18:38.58:0,39,359	0/0:19,0:21:47.75:0,48,497	0/0:13,0:15:32.96:0,33,287	0/0:8,0:9:23.75:0,24,216	0/0:23,0:23:38.02:0,38,427	0/0:11,0:12:32.74:0,33,293	0/0:14,0:14:26.97:0,27,254	1/1:4,17:22:35.20:467,35,0	1/1:4,11:16:8.88:214,9,0	0/0:13,0:14:29.75:0,30,274	0/0:21,0:24:47.44:0,47,472	0/0:27,0:27:69.04:0,69,660	0/0:22,0:23:59.77:0,60,565	0/0:23,0:23:59.75:0,60,560	0/0:13,0:15:38.80:0,39,361	1/1:6,0:10:3.94:29,4,0	1/1:4,5:11:14.54:182,15,0	0/0:21,0:21:48.03:0,48,457	0/0:22,0:22:56.93:0,57,537	1/1:3,20:23:51.17:738,51,0	0/0:15,0:16:23.95:0,24,282	0/0:17,0:19:36.67:0,37,372	0/0:17,0:19:50.46:0,50,456
chr10	83699997	.	GGAA	G	244.61	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.441;DP=451;FS=0.000;HRun=0;HaplotypeScore=72.5776;InbreedingCoeff=0.8647;MQ=90.43;MQ0=0;MQRankSum=-0.706;QD=20.38;ReadPosRankSum=0.967;VQSLOD=2.9279;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.28:0,87,1852	0/0:5,0:5:12.04:0,12,268	0/0:23,0:23:55.88:0,56,1236	0/0:20,0:18:33.03:0,33,607	0/0:15,0:15:36.11:0,36,761	0/0:18,0:18:45.14:0,45,944	0/0:19,0:19:54.19:0,54,1177	0/0:24,0:24:72.25:0,72,1583	0/0:12,0:12:36.12:0,36,803	0/0:18,0:18:51.17:0,51,1131	0/0:6,0:6:18.06:0,18,402	0/0:15,0:15:42.14:0,42,934	0/0:17,0:17:45.15:0,45,996	0/0:9,0:9:21.07:0,21,449	0/0:14,0:14:42.11:0,42,872	0/0:21,0:21:57.20:0,57,1266	0/0:22,0:22:66.23:0,66,1433	0/0:18,0:18:45.15:0,45,981	0/0:22,0:22:57.20:0,57,1225	0/0:10,0:10:30.10:0,30,670	1/1:1,11:12:21.07:337,21,0	0/0:2,0:2:6.02:0,6,134	0/0:8,0:8:24.08:0,24,452	0/0:21,0:21:60.21:0,60,1276	0/0:20,0:20:54.19:0,54,1198	0/0:14,0:14:42.14:0,42,923	0/0:19,0:19:57.20:0,57,1250	0/0:15,0:15:45.15:0,45,981
chr10	83700157	.	T	TATGA	4887.28	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-1.284;DP=429;FS=34.331;HRun=0;HaplotypeScore=111.7382;InbreedingCoeff=0.8973;MQ=55.21;MQ0=0;MQRankSum=-1.790;QD=23.96;ReadPosRankSum=-0.606;VQSLOD=2.7686;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:15:18.06:311,18,0	1/1:6,1:7:3.01:73,3,0	0/0:11,0:7:4.74:0,5,122	0/0:12,0:10:9.03:0,9,144	0/0:15,0:15:13.82:0,14,114	0/0:26,0:26:57.19:0,57,916	1/1:3,8:11:18.06:435,18,0	1/1:26,0:33:38.57:328,39,0	0/0:14,0:14:30.10:0,30,471	1/1:9,6:15:18.06:436,18,0	1/1:2,15:17:36.12:870,36,0	0/0:12,0:12:24.08:0,24,385	0/0:11,0:11:21:0,21,185	0/0:6,0:6:6:0,6,54	1/1:8,5:13:24.02:478,24,0	1/1:8,12:20:42.03:797,42,0	1/1:12,3:14:10.07:286,10,0	0/0:14,0:14:27.05:0,27,387	1/1:18,0:20:20.89:237,21,0	1/1:10,0:17:17.86:211,18,0	0/0:14,0:14:21.07:0,21,340	0/0:6,0:6:15.02:0,15,140	0/0:22,0:22:45.14:0,45,701	0/0:13,0:13:30.10:0,30,485	0/0:14,0:14:6.01:0,6,57	0/0:20,0:20:38.97:0,39,632	1/1:13,0:21:38.74:426,39,0	0/0:15,0:15:12.04:0,12,195
chr10	83700163	.	TGAA	T	422.81	PASS	AB=0.673;AC=6;AF=0.107;AN=56;BaseQRankSum=4.437;DP=407;FS=4.092;HRun=0;HaplotypeScore=107.3170;InbreedingCoeff=0.2985;MQ=53.64;MQ0=0;MQRankSum=-3.354;QD=8.46;ReadPosRankSum=1.587;VQSLOD=2.5179;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:36.12:0,36,690	0/0:5,0:5:15.05:0,15,278	0/0:10,0:7:16.63:0,17,276	0/0:12,0:10:24.08:0,24,438	0/1:8,6:14:24.37:121,0,24	0/0:23,0:23:69.23:0,69,1576	0/0:11,0:11:27.09:0,27,437	0/0:31,0:31:87.29:0,87,1718	0/0:13,0:13:36.12:0,36,850	0/0:15,0:15:42.13:0,42,652	0/0:17,0:17:45.15:0,45,803	0/0:13,0:13:36.05:0,36,725	0/1:4,7:11:24.48:166,0,24	0/1:1,4:5:6.09:65,0,6	0/0:11,0:11:33.11:0,33,569	0/0:20,0:20:51.17:0,51,925	0/0:15,0:14:36.09:0,36,579	0/0:13,0:13:33.11:0,33,763	0/0:20,0:20:60.20:0,60,1089	0/0:15,0:15:38.99:0,39,615	0/0:13,0:13:30.10:0,30,634	1/1:0,6:6:15.02:151,15,0	0/0:23,0:23:63.04:0,63,1296	0/0:12,0:12:33.11:0,33,777	0/1:11,3:14:47.56:48,0,117	0/0:20,0:20:60.20:0,60,1304	0/0:18,0:18:54.18:0,54,1085	0/0:12,0:12:36:0,36,537
chr10	83700647	.	TG	T	1157.96	PASS	AB=0.537;AC=3;AF=0.054;AN=56;BaseQRankSum=6.036;DP=670;FS=3.072;HRun=3;HaplotypeScore=68.1802;InbreedingCoeff=0.6479;MQ=85.06;MQ0=0;MQRankSum=-1.034;QD=28.95;ReadPosRankSum=0.528;VQSLOD=2.9874;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,1927	0/0:10,0:10:27.09:0,27,388	0/0:23,0:23:63.20:0,63,871	0/0:21,0:21:51.13:0,51,689	0/0:32,0:32:81.27:0,81,1161	0/0:18,0:18:54.17:0,54,760	0/0:29,0:29:84.27:0,84,1193	0/0:21,0:21:63.20:0,63,891	0/0:32,0:32:96.32:0,96,1383	0/0:23,0:22:66.22:0,66,949	0/0:13,0:13:33.11:0,33,474	0/0:31,0:31:90.29:0,90,1277	0/0:20,0:20:57.19:0,57,820	0/0:25,0:25:72.24:0,72,1036	0/0:28,0:28:84.28:0,84,1200	0/0:38,0:38:99:0,111,1580	0/0:27,0:27:81.26:0,81,1145	0/0:23,0:23:66.20:0,66,924	0/0:13,0:13:30.10:0,30,432	0/0:26,0:26:69.17:0,69,950	0/0:17,0:17:48.16:0,48,686	0/0:26,0:26:78.26:0,78,1122	0/0:12,0:12:33.05:0,33,433	0/0:27,0:27:78.26:0,78,1123	0/0:22,0:22:66.21:0,66,932	0/1:3,19:22:26.26:595,0,26	0/0:27,0:27:78.26:0,78,1119	1/1:0,18:18:54.17:669,54,0
chr10	83701578	.	GTCGGATGTTGTCTCCTCATCCGT	G	5044.13	PASS	AB=0.976;AC=11;AF=0.196;AN=56;BaseQRankSum=9.876;DP=599;FS=6.684;HRun=0;HaplotypeScore=341.0217;InbreedingCoeff=0.8762;MQ=87.07;MQ0=0;MQRankSum=-9.805;QD=53.66;ReadPosRankSum=-0.667;VQSLOD=2.8535;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,10056	0/0:7,0:7:21.07:0,21,2296	0/0:16,0:17:48.16:0,48,3042	0/0:25,0:25:69.22:0,69,4145	1/1:0,11:11:21.07:427,21,0	0/0:16,0:16:45.15:0,45,4277	0/0:36,0:36:99:0,105,8615	0/0:30,0:30:90.13:0,90,6303	0/0:24,0:24:72.25:0,72,6291	0/0:27,0:27:79.46:0,79,6973	0/0:14,0:14:42.14:0,42,3644	0/1:39,1:40:84.35:84,0,8319	1/1:1,9:10:15.05:954,15,0	1/1:0,14:14:21.07:1335,21,0	0/0:19,0:19:57.20:0,57,5235	0/0:23,0:23:69.24:0,69,6897	0/0:30,0:30:90.28:0,90,7565	0/0:23,0:23:69.24:0,69,6999	0/0:25,0:25:66.23:0,66,4589	0/0:15,0:15:39.13:0,39,3939	0/0:31,0:31:93.32:0,93,8451	1/1:0,7:7:15.05:653,15,0	0/0:8,0:8:24.08:0,24,2323	0/0:35,0:35:99:0,102,9363	1/1:0,12:12:30.10:1590,30,0	0/0:26,0:26:72.25:0,72,7150	0/0:18,0:18:51.16:0,51,4790	0/0:17,0:17:51.18:0,51,4726
chr10	83702543	.	C	CATTATT	11246.24	PASS	AB=1.000;AC=37;AF=0.685;AN=54;BaseQRankSum=1.022;DP=448;FS=10.525;HRun=0;HaplotypeScore=87.7252;InbreedingCoeff=0.7765;MQ=55.41;MQ0=0;MQRankSum=-6.735;QD=34.60;ReadPosRankSum=-1.775;VQSLOD=3.1263;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,18:27:18.06:596,18,0	1/1:0,4:4:8.99:222,9,0	0/0:8,0:5:9:0,9,113	0/0:14,0:12:15.05:0,15,201	1/1:13,0:13:15.05:317,15,0	0/0:19,0:19:51.14:0,51,968	1/1:3,8:11:9.03:259,9,0	1/1:9,19:31:66.18:1267,66,0	0/0:18,0:18:51.16:0,51,983	1/1:10,18:28:48.11:1151,48,0	1/1:3,17:20:51.04:1205,51,0	0/0:24,0:24:60.18:0,60,1155	1/1:6,0:6:6.02:155,6,0	1/1:4,0:4:3.01:30,3,0	1/1:7,22:31:36.12:1172,36,0	1/1:4,25:32:30.10:990,30,0	1/1:6,15:23:27.04:780,27,0	0/0:27,0:27:63.18:0,63,1247	1/1:7,12:21:48.11:1154,48,0	1/1:2,2:4:6.02:201,6,0	0/1:8,0:8:25.24:69,0,25	./.	0/0:7,0:7:18.06:0,18,361	0/0:4,0:4:9.03:0,9,164	1/1:18,0:18:12.04:316,12,0	1/1:2,11:15:36.08:768,36,0	1/1:6,10:18:15.05:494,15,0	1/1:5,5:10:3.01:101,3,0
chr10	83702555	.	T	TATTATTATTAACAACAAC	6339.44	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=4.244;DP=471;FS=3.240;HRun=0;HaplotypeScore=208.3292;InbreedingCoeff=-0.0600;MQ=56.86;MQ0=0;MQRankSum=-11.313;QD=19.51;ReadPosRankSum=-3.771;VQSLOD=3.1868;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:99:174,0,161	0/1:4,0:4:44.91:45,0,57	0/0:13,0:7:17.98:0,18,373	0/0:17,0:15:24.45:0,24,501	1/1:15,0:22:42.14:1065,42,0	0/0:18,0:18:54.19:0,54,2146	0/1:12,0:12:89.88:228,0,90	0/1:34,0:34:99:647,0,1066	0/0:22,0:22:66.21:0,66,2636	0/1:27,0:26:99:99,0,857	0/1:19,0:19:99:184,0,485	0/0:27,0:27:78.25:0,78,3108	1/1:6,4:11:24.08:1182,24,0	1/1:3,0:6:12.04:381,12,0	0/1:29,0:29:99:167,0,306	0/1:32,0:32:99:114,0,273	0/1:24,0:24:99:212,0,324	0/0:25,0:25:69.24:0,69,2980	0/1:16,0:16:59.70:60,0,288	0/1:6,0:6:79.12:79,0,316	0/0:8,0:8:20.52:0,21,456	1/1:1,0:1:3.01:128,3,0	0/0:10,0:10:30.10:0,30,1200	0/0:6,0:6:12.04:0,12,512	1/1:6,14:20:24.08:1271,24,0	0/1:15,0:15:64.14:64,0,516	0/1:16,0:16:86.96:170,0,87	0/1:5,0:5:54.28:70,0,54
chr10	83702604	.	G	GA	643.63	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.116;DP=550;FS=3.364;HRun=4;HaplotypeScore=65.5677;InbreedingCoeff=0.8859;MQ=80.67;MQ0=0;MQRankSum=-3.096;QD=30.65;ReadPosRankSum=-2.483;VQSLOD=2.9825;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:54.13:0,54,600	0/0:4,0:4:6.02:0,6,65	0/0:16,0:16:42.11:0,42,470	0/0:18,0:18:42.12:0,42,476	0/0:20,0:20:48.14:0,48,544	0/0:19,0:19:54.15:0,54,612	0/0:19,0:19:51.13:0,51,568	0/0:37,0:37:93.20:0,93,1023	0/0:23,0:23:66.17:0,66,739	0/0:34,0:34:87.24:0,87,983	0/0:22,0:22:42.11:0,42,476	0/0:32,0:32:93.25:0,93,1045	0/0:20,0:20:57.15:0,57,636	0/0:16,0:16:39.11:0,39,442	0/0:24,0:24:51.13:0,51,568	0/0:32,0:32:50.98:0,51,567	0/0:23,0:24:64.02:0,64,703	0/0:20,0:20:60.11:0,60,654	0/0:12,0:12:30.07:0,30,329	0/0:12,0:12:36.10:0,36,408	1/1:1,20:21:54.18:738,54,0	0/0:5,0:5:15.04:0,15,170	0/0:10,0:10:27.08:0,27,306	0/0:20,0:20:57.15:0,57,636	0/0:13,0:13:24.07:0,24,272	0/0:22,0:22:66.19:0,66,749	0/0:19,0:19:36.10:0,36,408	0/0:7,0:7:21.06:0,21,238
chr10	83702777	.	GGA	G	6129.45	PASS	AC=22;AF=0.407;AN=54;BaseQRankSum=13.121;DP=648;FS=2.503;HRun=0;HaplotypeScore=94.0382;InbreedingCoeff=0.9815;MQ=67.79;MQ0=9;MQRankSum=1.597;QD=28.12;ReadPosRankSum=3.540;VQSLOD=6.2335;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.26:0,87,1415	./.	0/0:45,0:27:57.01:0,57,829	0/0:59,0:36:23.51:0,24,553	1/1:1,13:14:36.12:454,36,0	0/0:21,0:21:42.11:0,42,646	1/1:4,20:24:51.16:643,51,0	0/0:26,1:27:16.26:0,16,756	0/0:23,0:23:63.22:0,63,1047	1/1:1,30:31:75.23:933,75,0	1/1:5,7:12:24.08:303,24,0	0/0:25,0:25:31.36:0,31,1025	1/1:2,26:27:69.22:871,69,0	1/1:5,21:25:54.17:678,54,0	1/1:7,18:24:46.39:571,46,0	1/1:7,15:22:54.14:654,54,0	1/1:9,13:22:54.13:648,54,0	0/0:14,0:14:39.13:0,39,648	0/0:16,0:16:39.12:0,39,587	0/0:14,0:14:39.13:0,39,646	0/0:23,0:23:16.59:0,17,807	1/1:2,6:8:11.90:147,12,0	0/0:14,0:14:39.13:0,39,643	0/0:52,0:52:99:0,126,2010	1/1:0,6:6:18.06:227,18,0	0/0:36,0:36:87.29:0,87,1414	0/0:22,0:22:48.16:0,48,786	0/0:5,0:5:9.03:0,9,147
chr10	83702844	.	GAGA	G	3068.14	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.748;DP=565;FS=4.311;HRun=0;HaplotypeScore=114.0751;InbreedingCoeff=0.9600;MQ=60.95;MQ0=15;MQRankSum=-10.785;QD=36.53;ReadPosRankSum=-0.592;VQSLOD=4.4150;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.24:0,72,1588	1/1:0,4:4:9.03:152,9,0	0/0:54,1:22:38.83:0,39,684	0/0:57,0:22:11.34:0,11,298	0/0:17,0:17:35.95:0,36,630	0/0:17,0:17:42.14:0,42,934	1/1:6,9:15:33.08:507,33,0	0/0:25,0:25:69.21:0,69,1363	0/0:19,0:19:43.65:0,44,1102	1/1:4,16:20:51.08:805,51,0	1/1:0,6:6:6.02:102,6,0	0/0:25,0:25:63.20:0,63,1316	0/0:17,0:17:42.14:0,42,950	0/0:16,0:16:45.15:0,45,1024	1/1:1,10:11:33.11:539,33,0	1/1:1,13:14:42.14:705,42,0	1/1:4,10:14:30.02:449,30,0	0/0:11,0:11:33.11:0,33,727	0/0:17,0:16:48.13:0,48,1043	0/0:11,0:11:27.09:0,27,611	0/0:30,0:30:78.72:0,79,1704	0/0:9,0:9:24.07:0,24,506	0/0:12,0:12:36.12:0,36,828	0/0:39,0:39:99:0,105,2310	0/0:16,0:16:48.04:0,48,942	0/0:22,1:23:15.74:0,16,1292	0/0:26,0:26:72.25:0,72,1630	0/0:10,0:10:30.10:0,30,689
chr10	83702864	.	G	GGA	2890.91	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=6.221;DP=598;FS=2.985;HRun=0;HaplotypeScore=106.4492;InbreedingCoeff=0.9431;MQ=56.07;MQ0=20;MQRankSum=-5.734;QD=28.91;ReadPosRankSum=-1.932;VQSLOD=4.6758;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.08:0,69,808	1/1:1,2:3:6.02:99,6,0	0/0:47,0:17:16.87:0,17,169	0/0:63,0:21:16.82:0,17,124	0/0:15,0:15:15.05:0,15,191	0/0:22,0:22:60.04:0,60,706	1/1:10,6:16:30.05:485,30,0	0/0:28,0:28:62.14:0,62,712	0/0:21,0:21:37.70:0,38,515	1/1:8,9:17:36.12:561,36,0	1/1:2,11:13:18:283,18,0	0/0:26,0:26:60.19:0,60,763	0/0:13,0:13:36.10:0,36,444	0/0:17,0:17:42.09:0,42,504	1/1:12,9:21:51.16:775,51,0	1/1:1,16:18:45.15:728,45,0	1/1:6,6:10:9.03:150,9,0	0/0:12,0:11:33.11:0,33,419	0/0:27,0:22:39:0,39,451	0/0:9,0:9:21.07:0,21,267	0/0:37,0:37:73.45:0,73,951	0/0:8,0:8:24.08:0,24,305	0/0:9,0:9:24.08:0,24,305	0/0:44,0:43:99:0,111,1412	0/0:16,0:16:39.05:0,39,460	0/0:21,1:22:7.06:0,7,613	0/0:28,0:28:78.25:0,78,992	0/0:7,0:7:18.06:0,18,229
chr10	83702891	.	A	AAG	4246.47	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-9.768;DP=631;FS=4.596;HRun=0;HaplotypeScore=98.7347;InbreedingCoeff=0.9517;MQ=55.05;MQ0=10;MQRankSum=1.717;QD=32.42;ReadPosRankSum=-0.596;VQSLOD=6.8271;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,25:33:78.05:1231,78,0	0/0:7,0:7:15.05:0,15,185	0/0:38,0:18:36.01:0,36,406	0/0:46,0:15:2.63:0,3,168	0/0:14,0:14:36.07:0,36,412	0/0:25,0:25:57.11:0,57,676	0/0:15,0:15:45.10:0,45,537	1/1:8,24:33:72.66:1099,73,0	0/0:18,0:18:29.71:0,30,368	0/0:23,0:23:51.15:0,51,620	0/0:15,0:15:27:0,27,298	0/0:24,0:24:51.16:0,51,628	0/0:14,0:14:42.13:0,42,517	0/0:19,0:19:51.16:0,51,628	0/0:24,0:24:60.14:0,60,710	0/0:21,0:21:51.16:0,51,628	0/0:15,0:14:24.06:0,24,284	0/0:17,0:17:42.07:0,42,486	1/1:8,12:20:36.12:587,36,0	1/1:5,8:12:21.07:326,21,0	0/0:39,0:39:93.16:0,93,1100	0/0:12,0:12:24.07:0,24,295	0/0:11,0:11:24.07:0,24,285	0/0:47,0:47:99:0,111,1354	0/0:20,0:20:45.14:0,45,554	0/0:24,0:24:69.21:0,69,839	1/1:9,23:32:63.20:1003,63,0	0/0:11,0:11:27.08:0,27,332
chr10	83703331	.	TCTTTTTCTC	T	2919.99	PASS	AB=0.974;AC=43;AF=0.827;AN=52;BaseQRankSum=-2.799;DP=348;FS=12.296;HRun=0;HaplotypeScore=121.8170;InbreedingCoeff=-0.2122;MQ=61.08;MQ0=12;MQRankSum=-0.467;QD=8.46;ReadPosRankSum=2.824;VQSLOD=1.6306;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:12:62.17:62,0,103	./.	0/1:38,0:12:11.54:12,0,196	0/1:38,0:14:19.53:20,0,161	1/1:9,0:9:17.59:116,18,0	0/1:10,0:10:58.38:58,0,101	1/1:6,0:7:1:195,1,0	1/1:14,0:13:17.82:122,18,0	0/1:12,0:12:21.12:152,0,21	1/1:22,0:21:36.01:399,36,0	1/1:9,0:9:8.52:114,9,0	1/1:8,0:8:11.89:82,12,0	1/1:3,0:4:2.98:21,3,0	1/1:7,0:6:11.98:110,12,0	1/1:8,0:8:15.05:226,15,0	1/1:17,0:15:5.89:42,6,0	1/1:5,0:4:8.94:81,9,0	0/1:6,0:6:36.50:37,0,37	1/1:9,7:16:26.93:231,27,0	./.	1/1:9,0:9:8.94:78,9,0	0/1:15,0:14:21.21:156,0,21	0/1:8,0:8:4.89:5,0,180	1/1:7,0:7:11.83:83,12,0	1/1:16,0:15:3.50:240,3,0	0/1:20,0:20:99:191,0,138	1/1:11,0:11:3.59:135,4,0	1/1:7,0:7:15.73:92,16,0
chr10	83703340	.	CCTT	C	1431.52	PASS	AB=0.998;AC=34;AF=0.630;AN=54;BaseQRankSum=1.187;DP=329;FS=6.154;HRun=0;HaplotypeScore=84.7433;InbreedingCoeff=0.1137;MQ=58.81;MQ0=14;MQRankSum=-0.344;QD=5.84;ReadPosRankSum=-0.628;VQSLOD=1.5097;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:13:35.10:35,0,42	./.	0/0:59,0:15:6.80:0,7,426	0/1:44,0:13:22.99:23,0,164	1/1:9,0:9:8.65:40,9,0	0/0:7,0:7:17.71:0,18,125	1/1:3,4:6:18.05:263,18,0	0/1:13,0:11:4.51:5,0,87	0/1:8,0:8:37.77:38,0,77	1/1:17,2:18:15.69:367,16,0	1/1:1,4:5:6.02:98,6,0	0/1:4,0:4:10.35:30,0,10	1/1:2,0:2:2.98:21,3,0	0/1:8,0:7:3.06:3,0,13	1/1:1,6:7:15.05:253,15,0	1/1:16,0:14:4.02:59,4,0	1/1:6,1:5:9.03:139,9,0	0/0:6,0:6:13.96:0,14,83	0/1:11,0:10:6.23:6,0,33	0/0:4,0:3:3.62:0,4,11	1/1:9,0:9:5.80:39,6,0	1/1:12,0:11:3.99:10,4,0	0/0:7,0:6:11.89:0,12,98	1/1:5,0:5:5.86:38,6,0	1/1:12,0:11:9.60:62,10,0	0/1:17,0:17:23.05:23,0,195	0/1:9,0:7:25.59:26,0,28	0/1:6,0:6:22.91:23,0,56
chr10	83703363	.	TTC	T	784.46	PASS	AB=0.976;AC=42;AF=0.808;AN=52;BaseQRankSum=-2.754;DP=209;FS=10.100;HRun=0;HaplotypeScore=36.3010;InbreedingCoeff=0.0975;MQ=62.20;MQ0=12;MQRankSum=-2.898;QD=6.33;ReadPosRankSum=-2.783;VQSLOD=0.4612;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:12:6.15:127,6,0	1/1:2,1:3:2.97:20,3,0	0/0:44,1:9:20.58:0,21,146	0/0:36,0:11:13.57:0,14,115	1/1:3,0:3:2.96:19,3,0	0/1:5,0:5:0.62:84,0,1	1/1:3,0:2:4.22:24,4,0	0/1:11,0:8:1.87:52,0,2	1/1:2,0:2:4.53:25,5,0	1/1:6,1:5:11.54:83,12,0	./.	0/1:6,0:6:10.59:16,0,11	1/1:2,0:2:2.98:21,3,0	1/1:3,0:2:2.60:10,3,0	./.	1/1:9,0:7:12.71:97,13,0	1/1:6,3:7:2.26:69,2,0	1/1:3,0:3:2.03:5,2,0	0/1:6,0:5:6.58:48,0,7	1/1:5,0:4:6.72:36,7,0	1/1:5,0:5:0.65:2,1,0	1/1:3,0:2:3.48:13,3,0	1/1:6,0:5:8.90:60,9,0	1/1:1,0:1:2.96:19,3,0	0/1:5,0:4:11.08:11,0,23	1/1:6,0:6:4.23:26,4,0	0/1:5,1:4:14.84:28,0,15	1/1:2,0:2:2.98:22,3,0
chr10	83703364	.	TC	T	978.62	PASS	AB=0.833;AC=45;AF=0.900;AN=50;BaseQRankSum=-3.317;DP=182;FS=11.310;HRun=1;HaplotypeScore=30.3509;InbreedingCoeff=0.3175;MQ=66.13;MQ0=11;MQRankSum=-4.499;QD=9.15;ReadPosRankSum=-1.246;VQSLOD=-0.6309;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,2:11:19.91:152,20,0	1/1:3,0:3:2.97:20,3,0	0/0:38,1:9:17.56:0,18,93	0/0:33,0:11:13.86:0,14,92	1/1:2,0:2:2.94:18,3,0	1/1:4,1:5:11:87,11,0	1/1:1,2:2:4.21:23,4,0	1/1:11,0:8:18.32:96,18,0	1/1:1,0:1:2.99:23,3,0	1/1:5,0:3:8.92:62,9,0	./.	1/1:6,0:6:13.11:64,13,0	1/1:2,0:2:2.98:21,3,0	./.	./.	1/1:8,0:6:13.92:89,14,0	1/1:7,1:6:11.29:83,11,0	1/1:2,0:2:5.66:33,6,0	1/1:4,0:3:3.31:39,3,0	1/1:4,0:4:8.48:46,8,0	1/1:5,0:5:8.15:34,8,0	1/1:3,0:2:5.83:34,6,0	1/1:4,0:4:8.90:60,9,0	1/1:1,0:1:2.96:19,3,0	0/1:4,1:4:8.78:16,0,9	1/1:5,0:5:4.48:21,4,0	1/1:6,0:4:7.22:42,7,0	1/1:2,0:2:2.98:22,3,0
chr10	83703935	.	CT	C	8937.33	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=15.010;DP=611;FS=10.773;HRun=2;HaplotypeScore=61.5585;InbreedingCoeff=0.9930;MQ=86.21;MQ0=0;MQRankSum=-8.470;QD=35.75;ReadPosRankSum=0.622;VQSLOD=4.5510;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:90.29:1168,90,0	0/0:17,0:17:51.17:0,51,764	0/0:21,0:21:63.16:0,63,869	0/0:21,0:21:57.19:0,57,841	1/1:0,11:11:30.10:389,30,0	0/0:25,0:25:72.24:0,72,1061	0/0:25,0:25:72.21:0,72,1037	1/1:0,27:27:81.26:1048,81,0	0/0:22,0:22:66.22:0,66,979	0/0:20,0:20:60.19:0,60,881	0/0:12,0:12:30.10:0,30,444	0/0:26,0:26:78.26:0,78,1151	1/1:0,14:14:35.97:466,36,0	1/1:3,22:25:21.23:771,21,0	0/0:35,0:35:99:0,105,1553	0/0:27,0:27:78.26:0,78,1149	0/0:35,0:35:99:0,99,1479	0/0:22,0:22:66.22:0,66,989	1/1:0,23:23:69.22:895,69,0	1/1:0,12:12:33.11:429,33,0	1/1:1,23:24:66.21:857,66,0	1/1:0,16:16:48.16:623,48,0	0/0:18,0:18:45.15:0,45,675	0/0:35,0:35:99:0,105,1574	1/1:0,19:19:54.18:701,54,0	1/1:1,19:20:12.20:655,12,0	1/1:1,20:21:56.72:739,57,0	1/1:0,5:5:15.05:195,15,0
chr10	83710818	.	T	TA	4961.08	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=16.511;DP=659;FS=3.025;HRun=1;HaplotypeScore=150.8874;InbreedingCoeff=0.9961;MQ=79.95;MQ0=0;MQRankSum=-16.730;QD=34.21;ReadPosRankSum=1.327;VQSLOD=4.5624;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1425	1/1:3,9:12:36.10:428,36,0	0/0:22,0:22:27.21:0,27,647	0/0:20,0:20:56.93:0,57,652	0/0:19,0:19:51.15:0,51,646	0/0:26,0:26:66.19:0,66,829	1/1:6,27:33:99:1217,99,0	0/0:24,0:24:69.18:0,69,845	0/0:25,0:25:72.23:0,72,933	1/1:2,15:17:48.11:604,48,0	1/1:1,5:6:15.03:158,15,0	0/0:35,0:35:99:0,105,1287	0/0:24,0:24:72.21:0,72,911	0/0:29,0:29:84.25:0,84,1074	1/1:1,28:29:87.27:1057,87,0	1/1:4,26:30:90.25:1073,90,0	1/1:10,8:18:39.05:424,39,0	0/0:29,0:29:84.24:0,84,1061	0/0:19,0:19:54.14:0,54,661	0/0:18,0:18:51.12:0,51,618	0/0:54,0:54:99:0,156,2007	0/0:18,0:18:51.17:0,51,662	0/0:12,0:12:36.12:0,36,467	0/0:31,0:31:84.26:0,84,1077	0/0:24,0:24:72.23:0,72,934	0/0:21,0:21:57.14:0,57,710	0/0:18,0:18:51.17:0,51,662	0/0:8,0:8:21.07:0,21,272
chr10	83710821	.	TGTCCAGAG	T	9396.85	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=16.351;DP=632;FS=1.193;HRun=0;HaplotypeScore=217.7628;InbreedingCoeff=0.9968;MQ=81.74;MQ0=0;MQRankSum=-16.546;QD=74.58;ReadPosRankSum=2.724;VQSLOD=4.7787;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,4717	1/1:1,9:10:30.10:783,30,0	0/0:21,0:21:63.22:0,63,2573	0/0:23,0:22:66.20:0,66,2327	0/0:16,0:16:48.16:0,48,2080	0/0:23,0:23:69.24:0,69,2989	1/1:3,27:30:86.91:2128,87,0	0/0:24,0:24:72.25:0,72,3247	0/0:25,0:25:75.26:0,75,3341	1/1:0,15:15:42.01:1184,42,0	1/1:0,6:6:18.03:410,18,0	0/0:35,0:35:99:0,105,4740	0/0:26,0:26:78.25:0,78,3414	0/0:30,0:30:90.31:0,90,4002	1/1:0,28:28:83.87:2232,84,0	1/1:2,26:28:84.29:2255,84,0	1/1:1,8:9:20.61:405,21,0	0/0:29,0:29:87.30:0,87,3874	0/0:17,0:17:51.16:0,51,2013	0/0:17,0:17:51.18:0,51,2316	0/0:54,0:54:99:0,163,7082	0/0:18,0:18:54.19:0,54,2492	0/0:12,0:12:36.12:0,36,1587	0/0:31,0:31:93.30:0,93,4189	0/0:24,0:24:72.25:0,72,3022	0/0:19,0:19:57.19:0,57,2395	0/0:18,0:18:54.19:0,54,2385	0/0:7,0:7:21.07:0,21,924
chr10	83713800	.	TACACAC	T	2270.15	PASS	AB=0.981;AC=23;AF=0.442;AN=52;BaseQRankSum=7.318;DP=822;FS=3.569;HRun=0;HaplotypeScore=194.6494;InbreedingCoeff=0.7721;MQ=52.06;MQ0=24;MQRankSum=-6.445;QD=6.76;ReadPosRankSum=-0.911;VQSLOD=2.7191;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:42:0.79:0,1,5	1/1:8,0:9:8.98:87,9,0	./.	./.	0/0:16,0:23:11.86:0,12,294	0/0:20,0:20:33.11:0,33,882	1/1:21,2:30:11.57:213,12,0	1/1:20,9:29:22.83:284,23,0	0/0:27,1:34:54.14:0,54,1265	1/1:14,0:24:22.62:294,23,0	1/1:12,0:21:3.48:43,3,0	0/0:49,0:50:77.40:0,77,1712	0/0:15,0:33:27.56:0,28,685	0/0:26,0:26:32.13:0,32,711	1/1:21,27:56:27.97:439,28,0	1/1:16,0:35:10.27:280,10,0	1/1:15,0:24:8.96:126,9,0	0/0:16,0:18:33.56:0,34,734	1/1:7,0:7:1.76:40,2,0	1/1:15,7:24:3.47:62,3,0	0/1:51,1:52:43.50:53,0,44	0/0:17,0:26:18.06:0,18,498	0/0:15,0:17:30.08:0,30,677	0/0:32,0:35:40.80:0,41,1216	0/0:11,0:21:15.02:0,15,263	0/0:34,0:37:39.96:0,40,759	1/1:7,15:23:26.61:545,27,0	0/0:13,0:15:45.13:0,45,1016
chr10	83714440	.	AGTGTGTGT	A	5267.70	PASS	AB=0.756;AC=34;AF=0.680;AN=50;BaseQRankSum=10.091;DP=658;FS=4.135;HRun=0;HaplotypeScore=219.4509;InbreedingCoeff=0.5962;MQ=61.56;MQ0=7;MQRankSum=-7.245;QD=11.68;ReadPosRankSum=0.551;VQSLOD=3.7614;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:29:5.54:138,6,0	1/1:3,5:8:3.01:61,3,0	0/0:19,0:10:3:0,3,27	./.	1/1:7,0:10:0.47:1,0,0	0/0:13,0:13:33.08:0,33,1044	1/1:29,3:32:11.79:120,12,0	0/1:22,0:30:24.05:188,0,24	0/0:41,0:41:69.22:0,69,2599	1/1:12,19:32:48.01:1113,48,0	1/1:6,6:12:3.01:57,3,0	0/0:28,0:29:54.17:0,54,1754	1/1:17,0:32:27.40:323,27,0	1/1:10,0:24:1.67:22,2,0	1/1:15,28:44:20.86:409,21,0	1/1:17,24:42:7.60:560,8,0	0/1:17,10:28:8.50:783,0,9	0/0:26,0:28:63.14:0,63,1746	1/1:15,1:16:6.49:110,6,0	1/1:4,11:16:12.04:248,12,0	1/1:34,2:34:2.99:24,3,0	./.	0/0:6,0:7:14.97:0,15,509	0/0:19,0:19:27.09:0,27,893	./.	1/1:9,0:19:18.49:280,18,0	1/1:9,17:26:27.09:609,27,0	1/1:3,0:12:12.04:222,12,0
chr10	83714547	.	ATATATG	A	181.03	PASS	AB=0.518;AC=7;AF=0.125;AN=56;BaseQRankSum=3.753;DP=889;FS=1.788;HRun=0;HaplotypeScore=207.8206;InbreedingCoeff=0.7412;MQ=60.60;MQ0=1;MQRankSum=-2.152;QD=2.62;ReadPosRankSum=0.574;VQSLOD=2.8766;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:80.86:0,81,2473	0/0:18,0:18:51.17:0,51,1687	0/0:35,0:24:37.96:0,38,1474	0/0:37,0:25:54.57:0,55,1255	0/1:2,12:14:0:0,0,0	0/0:29,0:29:81.28:0,81,2719	0/0:34,0:34:92.92:0,93,3173	0/0:62,0:62:99:0,171,4999	0/0:31,0:31:90.31:0,90,3249	0/0:51,0:51:99:0,151,5216	0/0:20,0:20:60.21:0,60,2027	0/0:41,0:41:99:0,114,3692	1/1:0,18:18:11.60:266,12,0	0/1:0,9:9:0.07:0,0,0	0/0:65,0:65:99:0,190,6501	0/0:66,0:66:99:0,192,6655	0/0:31,0:31:75.21:0,75,2286	0/0:21,0:21:54.12:0,54,1669	0/0:12,0:11:33.11:0,33,1115	0/0:35,0:35:99:0,102,3543	0/0:49,0:50:99:0,104,3469	0/1:1,17:18:0:0,0,0	0/0:25,0:25:69.22:0,69,2317	0/0:20,0:20:51.17:0,51,1774	1/1:0,10:10:0.94:2,1,0	0/0:53,0:53:99:0,157,5212	0/0:23,0:23:60.16:0,60,1957	0/0:15,0:15:36.12:0,36,1318
chr10	83714657	.	GTA	G	5131.69	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.356;DP=1044;FS=1.093;HRun=0;HaplotypeScore=154.6126;InbreedingCoeff=0.9996;MQ=55.67;MQ0=13;MQRankSum=0.278;QD=26.73;ReadPosRankSum=-3.074;VQSLOD=4.6330;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:51.18:0,51,868	0/0:24,0:24:57.15:0,57,901	0/0:32,0:15:42.12:0,42,628	0/0:37,0:13:29.41:0,29,387	0/0:23,0:23:66.17:0,66,1071	0/0:26,0:26:78.24:0,78,1310	0/0:19,0:19:48.15:0,48,812	1/1:4,63:67:99:2074,169,0	0/0:50,0:50:99:0,138,2309	0/0:60,0:60:99:0,178,3024	0/0:30,0:30:87.26:0,87,1479	0/0:49,0:49:99:0,129,2133	0/0:44,0:44:66.17:0,66,1047	0/0:31,0:31:48.12:0,48,783	0/0:62,0:61:99:0,147,2460	0/0:61,0:61:99:0,142,2248	0/0:27,0:26:69.19:0,69,1093	0/0:33,0:33:84.20:0,84,1392	1/1:11,18:25:69.14:885,69,0	1/1:6,17:23:27.08:354,27,0	1/1:16,25:41:81.19:1038,81,0	0/0:44,0:44:99:0,111,1920	0/0:33,0:33:96.28:0,96,1588	0/0:27,0:27:63.20:0,63,1074	0/0:37,1:38:99:0,102,1777	0/0:44,0:44:99:0,129,2109	1/1:8,23:31:62.90:781,63,0	0/0:17,0:17:48.16:0,48,850
chr10	83714689	.	A	ATG	16439.11	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-6.061;DP=1115;FS=16.479;HRun=0;HaplotypeScore=175.8886;InbreedingCoeff=0.9988;MQ=52.21;MQ0=22;MQRankSum=4.739;QD=32.17;ReadPosRankSum=-2.802;VQSLOD=4.6486;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:41:45.60:0,46,582	1/1:0,23:23:48.12:830,48,0	0/0:39,0:17:30.01:0,30,333	0/0:47,0:16:38.59:0,39,466	0/0:29,0:29:72.20:0,72,924	0/0:28,0:28:78.19:0,78,959	1/1:18,9:27:60.16:898,60,0	1/1:43,21:61:99:1821,141,0	0/0:49,0:49:99:0,129,1568	1/1:37,28:65:99:2541,165,0	1/1:15,23:38:99:1563,101,0	0/0:57,0:57:99:0,147,1829	0/0:39,0:39:60.12:0,60,730	0/0:23,0:23:30.10:0,30,398	1/1:24,36:59:99:2375,147,0	1/1:31,41:72:23.72:2574,24,0	1/1:13,18:30:57.78:868,58,0	0/0:35,0:35:77:0,77,983	1/1:16,9:19:44.98:728,45,0	1/1:14,13:27:33.06:474,33,0	1/1:24,23:46:63.18:1012,63,0	0/0:41,0:41:99:0,111,1335	0/0:34,0:34:90.30:0,90,1196	0/0:30,0:30:66.18:0,66,845	0/0:33,0:33:90.21:0,90,1105	0/0:53,0:53:99:0,141,1739	1/1:16,16:32:36.30:755,36,0	0/0:25,1:25:20.31:0,20,849
chr10	83714795	.	A	ATG	4487.02	PASS	AB=0.689;AC=15;AF=0.268;AN=56;BaseQRankSum=-3.670;DP=1005;FS=0.000;HRun=0;HaplotypeScore=338.5482;InbreedingCoeff=0.8943;MQ=53.74;MQ0=6;MQRankSum=1.876;QD=17.00;ReadPosRankSum=-0.791;VQSLOD=3.4713;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,19:42:53.69:213,0,54	0/0:12,0:12:17.92:0,18,190	0/0:45,0:27:35.65:0,36,506	0/0:49,0:26:60.14:0,60,683	1/1:17,16:33:38.96:559,39,0	0/0:30,0:30:69.20:0,69,837	0/0:24,0:24:35.95:0,36,429	0/0:56,0:56:99:0,114,1305	0/0:37,0:37:84.21:0,84,993	0/0:58,0:58:99:0,122,1641	0/0:26,0:26:57.16:0,57,690	0/0:45,0:45:99:0,109,1306	1/1:14,24:38:45.13:671,45,0	1/1:13,29:42:16.91:727,17,0	0/0:62,0:61:99:0,144,1747	0/0:47,0:47:99:0,117,1351	0/0:32,0:31:62.81:0,63,755	0/0:26,0:26:57.11:0,57,667	0/0:34,0:32:68.54:0,69,794	0/0:21,0:21:26.92:0,27,320	0/0:47,0:46:99:0,111,1365	1/1:12,15:27:26.75:290,27,0	0/0:28,0:29:63.15:0,63,736	0/0:29,0:31:39.06:0,39,652	1/1:11,14:25:30.03:416,30,0	1/1:21,28:49:34.77:1518,35,0	0/0:29,0:29:72.21:0,72,871	1/1:6,2:8:8.97:93,9,0
chr10	83719326	.	T	TCACAC	4526.46	PASS	AB=0.760;AC=19;AF=0.339;AN=56;BaseQRankSum=13.070;DP=676;FS=4.467;HRun=0;HaplotypeScore=176.5904;InbreedingCoeff=-0.3869;MQ=63.63;MQ0=6;MQRankSum=-9.954;QD=10.48;ReadPosRankSum=-1.179;VQSLOD=4.0477;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:33:99:226,0,136	0/1:10,0:11:41.50:42,0,72	0/0:34,0:22:63.19:0,63,942	0/0:38,0:30:73.12:0,73,1323	1/1:2,0:9:3.85:85,4,0	0/0:13,0:17:42.12:0,42,724	0/1:31,0:39:99:523,0,312	0/1:29,0:39:99:428,0,792	0/0:13,0:14:39.13:0,39,808	0/1:22,0:23:99:806,0,257	0/1:11,0:13:15.79:16,0,72	0/0:28,0:28:78.20:0,78,1497	0/1:5,0:17:99:185,0,121	0/1:11,0:27:99:319,0,302	0/1:15,0:16:99:172,0,228	0/1:17,1:21:99:223,0,218	0/1:18,0:24:99:388,0,308	0/0:26,0:26:78.21:0,78,1402	0/1:12,0:17:99:131,0,379	0/1:7,0:18:99:231,0,208	0/1:27,0:52:99:193,0,661	0/1:11,0:22:99:119,0,172	0/0:14,0:15:42.14:0,42,862	0/0:36,0:38:99:0,105,2246	0/1:5,0:17:93.91:94,0,153	0/0:20,0:20:60.20:0,60,1188	0/1:16,0:26:99:347,0,345	0/0:12,0:13:35.73:0,36,812
chr10	83721942	.	TA	T	941.69	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=8.804;DP=767;FS=12.593;HRun=11;HaplotypeScore=77.2943;InbreedingCoeff=0.6364;MQ=71.43;MQ0=0;MQRankSum=-0.138;QD=14.95;ReadPosRankSum=0.663;VQSLOD=3.0351;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,44:52:99:1033,131,0	0/0:10,0:11:26.89:0,27,263	0/0:13,0:14:10.77:0,11,89	0/1:11,0:11:11.91:12,0,55	0/0:50,1:55:99:0,113,1306	0/0:24,0:24:63.16:0,63,672	0/0:28,0:28:63.10:0,63,646	0/0:32,1:33:40.31:0,40,574	0/0:22,0:22:54.10:0,54,556	0/0:43,1:44:86.63:0,87,1116	0/0:17,1:18:17.46:0,17,391	0/0:41,0:42:99:0,108,1124	0/0:23,0:23:63.11:0,63,659	0/0:23,0:24:57:0,57,575	0/0:35,0:35:90.21:0,90,952	0/0:36,1:37:71.57:0,72,951	0/0:17,0:17:42.08:0,42,437	0/0:26,2:29:31.76:0,32,732	0/0:24,0:25:59.95:0,60,606	0/0:26,2:28:26.06:0,26,592	0/0:24,0:25:56.96:0,57,581	0/0:22,0:22:57.12:0,57,594	0/0:23,1:24:39.39:0,39,551	0/0:18,0:19:56.94:0,57,572	0/0:22,1:23:38.38:0,38,598	0/0:34,0:34:87.20:0,87,916	0/0:40,1:41:75.48:0,75,993	0/0:7,0:7:21.04:0,21,216
chr10	83726596	.	TAA	T	4413.91	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=2.828;DP=395;FS=3.353;HRun=11;HaplotypeScore=67.9495;InbreedingCoeff=0.9618;MQ=71.73;MQ0=1;MQRankSum=-2.523;QD=24.66;ReadPosRankSum=0.842;VQSLOD=4.8068;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:26:49.52:0,50,170	1/1:0,3:3:9.02:96,9,0	0/0:11,0:11:14.54:0,15,183	0/0:5,0:5:12.92:0,13,138	0/0:7,0:7:17.58:0,18,112	0/0:11,0:11:27.09:0,27,416	1/1:2,12:14:30.07:319,30,0	1/1:10,26:36:62.26:808,62,0	0/0:10,0:10:30.10:0,30,461	1/1:2,18:20:54.12:573,54,0	1/1:2,4:6:12.02:128,12,0	0/0:15,0:15:33.11:0,33,508	0/0:16,0:16:32.51:0,33,236	0/0:11,0:11:20.53:0,21,129	1/1:0,8:8:21.05:223,21,0	1/1:2,14:16:33.08:351,33,0	1/1:3,17:20:48.11:511,48,0	0/0:23,0:23:63.21:0,63,970	1/1:3,16:19:48.11:511,48,0	1/1:3,2:5:6.01:64,6,0	1/1:0,21:21:57.14:607,57,0	0/0:10,0:10:29.44:0,29,192	0/0:9,0:9:16.87:0,17,235	0/0:18,0:18:51.16:0,51,756	0/0:12,0:12:32.33:0,32,203	0/0:16,0:16:39.12:0,39,578	1/1:3,8:11:21.05:223,21,0	0/0:15,0:15:41.62:0,42,592
chr10	83726607	.	AT	A	1500.91	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-0.841;DP=373;FS=6.730;HRun=1;HaplotypeScore=69.3083;InbreedingCoeff=0.8757;MQ=65.64;MQ0=1;MQRankSum=-0.367;QD=18.76;ReadPosRankSum=0.654;VQSLOD=3.5728;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:5.15:5,0,62	0/0:4,0:4:11.15:0,11,65	0/0:9,0:8:19.29:0,19,220	0/0:4,0:4:9.85:0,10,97	1/1:0,6:6:15.04:192,15,0	0/0:9,0:9:27.09:0,27,358	0/0:12,0:12:28.19:0,28,148	0/0:33,0:33:95.97:0,96,611	0/0:11,0:11:33.10:0,33,422	0/0:20,0:20:49.21:0,49,303	0/0:6,0:6:17.04:0,17,101	0/0:11,0:11:33.11:0,33,437	1/1:1,10:11:26.36:373,26,0	1/1:0,10:10:24.07:318,24,0	0/0:9,0:9:22.38:0,22,123	0/0:14,0:14:30.73:0,31,159	0/0:20,0:20:54.33:0,54,296	0/0:24,0:24:69.15:0,69,874	0/0:18,0:18:52.77:0,53,329	0/0:4,0:4:11.79:0,12,81	0/0:22,0:22:57.01:0,57,308	1/1:0,11:11:24.08:332,24,0	0/0:7,0:7:16.60:0,17,202	0/0:17,0:17:51.15:0,51,659	1/1:0,14:14:33.11:456,33,0	0/0:13,0:13:39.12:0,39,501	0/0:11,0:11:27.52:0,28,153	0/0:15,0:15:40.75:0,41,518
chr10	83726724	.	AAATAATAAT	A	1050.39	PASS	AB=1.000;AC=19;AF=0.594;AN=32;BaseQRankSum=0.661;DP=195;FS=3.565;HRun=0;HaplotypeScore=54.2496;InbreedingCoeff=0.4619;MQ=55.77;MQ0=5;MQRankSum=-2.782;QD=12.66;ReadPosRankSum=-0.300;VQSLOD=1.2980;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:7:0.89:0,1,2	1/1:2,2:3:3.01:81,3,0	./.	./.	./.	0/0:2,0:2:6.02:0,6,252	1/1:2,2:4:3.01:81,3,0	0/1:28,0:31:0:0,0,0	./.	0/0:4,0:5:2.50:0,2,9	0/0:2,0:3:1.38:0,1,55	./.	1/1:2,0:3:3.01:63,3,0	1/1:3,3:6:9.03:243,9,0	1/1:1,1:2:3.01:81,3,0	./.	0/0:12,0:15:5.30:0,5,80	0/0:10,0:14:15.05:0,15,282	./.	./.	./.	./.	./.	./.	1/1:5,8:13:12.04:301,12,0	1/1:5,0:6:3.01:63,3,0	1/1:1,0:3:3.01:63,3,0	1/1:6,0:10:9.03:188,9,0
chr10	83727104	.	G	GC	402.52	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.313;DP=534;FS=0.000;HRun=9;HaplotypeScore=64.4957;InbreedingCoeff=0.5805;MQ=81.81;MQ0=0;MQRankSum=-1.238;QD=11.84;ReadPosRankSum=-0.785;VQSLOD=2.7523;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,22:34:2.06:479,2,0	0/0:6,0:6:14.99:0,15,130	0/0:18,0:18:23.88:0,24,207	0/0:15,0:15:20.98:0,21,179	0/0:18,0:18:41.03:0,41,344	0/0:17,0:17:41.98:0,42,364	0/0:25,0:27:70.05:0,70,585	0/0:25,0:25:44.39:0,44,386	0/0:10,0:11:25.98:0,26,205	0/0:13,0:13:29.97:0,30,258	0/0:9,0:9:23.98:0,24,208	0/0:26,1:27:32.71:0,33,497	0/0:14,0:14:38.99:0,39,339	0/0:23,0:23:56.96:0,57,494	0/0:16,0:16:35.96:0,36,308	0/0:16,0:16:32.99:0,33,287	0/0:36,0:36:95.93:0,96,828	0/0:17,0:17:44.99:0,45,390	0/0:14,0:14:29.91:0,30,260	0/0:1,0:1:3:0,3,26	0/0:50,0:50:99:0,117,1002	0/0:20,0:20:50.98:0,51,443	0/0:9,0:9:26.99:0,27,234	0/0:29,2:31:11.58:0,12,554	0/0:14,0:14:35.99:0,36,312	0/0:22,0:22:56.98:0,57,495	0/0:20,0:20:59.99:0,60,521	0/0:11,0:11:32.99:0,33,286
chr10	83727653	.	CA	C	13988.70	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=11.751;DP=796;FS=0.539;HRun=4;HaplotypeScore=80.2649;InbreedingCoeff=0.9999;MQ=89.10;MQ0=0;MQRankSum=-5.076;QD=32.68;ReadPosRankSum=1.551;VQSLOD=5.3994;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,48:50:99:1691,141,0	1/1:0,10:10:30.09:360,30,0	0/0:30,0:30:84.26:0,84,1124	0/0:30,0:30:84:0,84,1083	0/0:15,0:15:45.15:0,45,617	0/0:28,0:28:81.26:0,81,1117	1/1:0,21:21:60.18:720,60,0	1/1:1,34:35:99:1188,99,0	0/0:29,0:29:87.29:0,87,1218	1/1:2,22:24:66.20:792,66,0	1/1:0,18:18:48.15:576,48,0	0/0:38,0:38:99:0,108,1478	0/0:19,0:19:54.17:0,54,739	0/0:30,0:30:84.26:0,84,1144	1/1:2,52:54:99:1764,147,0	1/1:1,42:43:99:1404,117,0	1/1:0,24:24:63.19:756,63,0	0/0:27,0:27:78.20:0,78,1052	1/1:4,25:29:75.22:889,75,0	1/1:0,32:32:87.27:1042,87,0	1/1:5,56:61:99:1908,159,0	0/0:27,0:27:78.25:0,78,1073	0/0:25,0:25:72.24:0,72,1006	0/0:21,0:21:63.19:0,63,862	0/0:12,0:12:33.11:0,33,462	0/0:26,0:26:72.23:0,72,993	1/1:0,27:27:75.23:899,75,0	0/0:11,0:11:33.11:0,33,462
chr10	83729420	.	G	GCACACA	2781.46	PASS	AB=0.821;AC=34;AF=0.654;AN=52;BaseQRankSum=0.906;DP=689;FS=8.461;HRun=0;HaplotypeScore=172.2041;InbreedingCoeff=0.5940;MQ=57.23;MQ0=8;MQRankSum=-0.393;QD=6.35;ReadPosRankSum=-3.835;VQSLOD=0.8540;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:7,1:10:0.01:0,0,0	0/0:14,0:9:3.01:0,3,44	./.	1/1:14,0:17:3.01:64,3,0	0/1:16,0:19:0.51:1,0,319	1/1:24,0:38:18.71:262,19,0	1/1:19,0:18:8.99:102,9,0	0/0:19,0:20:14.91:0,15,259	1/1:15,0:23:31.35:606,31,0	1/1:12,0:12:9.01:173,9,0	0/0:30,0:36:43.77:0,44,659	1/1:15,0:22:9.03:229,9,0	1/1:21,0:23:3.48:79,3,0	1/1:13,5:24:8.65:159,9,0	1/1:14,2:27:8.64:173,9,0	1/1:24,1:34:12.57:274,13,0	0/0:19,0:22:33.09:0,33,539	1/1:15,0:15:2.51:7,3,0	1/1:16,0:16:5.95:67,6,0	1/1:40,0:39:21.52:350,22,0	0/1:17,4:22:0:0,0,0	0/0:10,0:13:18.94:0,19,328	0/0:50,0:55:57.15:0,57,1028	1/1:18,0:25:9.84:168,10,0	0/1:19,0:27:47.11:139,0,47	1/1:10,5:20:3.48:98,3,0	0/0:4,0:13:5.32:0,5,11
chr10	83729453	.	C	CACACAC	4263.65	PASS	AB=1.000;AC=36;AF=0.692;AN=52;BaseQRankSum=0.549;DP=739;FS=10.607;HRun=0;HaplotypeScore=185.0951;InbreedingCoeff=0.6293;MQ=62.59;MQ0=9;MQRankSum=-3.559;QD=8.48;ReadPosRankSum=-4.884;VQSLOD=0.9867;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:51,0:51:6.02:183,6,0	1/1:9,0:9:2.48:78,2,0	0/0:28,0:18:2.87:0,3,43	./.	1/1:22,0:21:2.94:65,3,0	0/1:25,0:25:0.51:1,0,319	1/1:35,0:35:21.06:304,21,0	1/1:27,0:26:6.02:82,6,0	0/0:12,0:12:14.94:0,15,259	1/1:31,0:31:41.18:819,41,0	1/1:10,0:10:9.48:174,9,0	0/0:35,0:35:42.88:0,43,657	1/1:24,0:24:11.96:322,12,0	1/1:25,0:23:6.84:172,7,0	1/1:28,0:28:17.68:437,18,0	1/1:28,0:27:17.62:343,18,0	1/1:36,0:36:6.54:84,7,0	0/0:24,0:23:33.09:0,33,539	1/1:9,0:9:5.05:101,5,0	1/1:14,6:21:5.78:67,6,0	1/1:49,0:48:21.99:351,22,0	./.	0/0:18,0:18:19.42:0,19,328	0/0:47,0:47:57.15:0,57,1028	1/1:25,0:23:10.57:169,11,0	0/1:27,0:27:40.29:175,0,40	1/1:21,0:21:12.98:336,13,0	0/0:15,0:13:5.31:0,5,11
chr10	83730244	.	AG	A	2803.74	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.389;DP=598;FS=2.122;HRun=1;HaplotypeScore=68.1145;InbreedingCoeff=0.9957;MQ=89.36;MQ0=0;MQRankSum=-2.798;QD=36.41;ReadPosRankSum=2.589;VQSLOD=4.2089;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.28:0,93,1459	0/0:9,0:9:27.05:0,27,403	0/0:26,0:26:75.24:0,75,1130	0/0:25,0:25:60.13:0,60,874	1/1:0,8:8:21.07:294,21,0	0/0:15,0:15:42.14:0,42,670	0/0:31,0:31:90.31:0,90,1431	0/0:31,0:30:93.31:0,93,1467	0/0:26,0:26:78.27:0,78,1243	0/0:19,0:19:54.17:0,54,841	0/0:8,0:8:21.07:0,21,336	0/0:15,0:15:45.15:0,45,719	1/1:0,21:21:60.18:839,60,0	1/1:0,28:28:78.26:1091,78,0	0/0:18,0:18:54.18:0,54,861	0/0:25,0:25:75.26:0,75,1199	0/0:29,0:29:87.28:0,87,1358	0/0:28,0:28:84.19:0,84,1256	0/0:29,0:29:87.29:0,87,1361	0/0:12,0:12:33.11:0,33,527	0/0:52,0:52:99:0,157,2482	1/1:0,6:6:18.06:252,18,0	0/0:10,0:10:30.10:0,30,479	0/0:32,0:32:96.31:0,96,1501	1/1:0,14:14:36.12:503,36,0	0/0:17,0:16:51.17:0,51,813	0/0:22,0:22:63.19:0,63,978	0/0:11,0:11:33.11:0,33,525
chr10	83731467	.	T	TA	2840.64	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=2.050;DP=533;FS=2.031;HRun=6;HaplotypeScore=120.2201;InbreedingCoeff=0.9286;MQ=66.83;MQ0=3;MQRankSum=-5.483;QD=31.92;ReadPosRankSum=-0.516;VQSLOD=1.9468;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:35.02:0,35,473	0/0:11,0:11:33.07:0,33,336	0/0:22,0:11:23.61:0,24,217	0/0:25,0:12:2.13:0,2,160	0/0:21,0:21:51.11:0,51,520	0/0:22,0:22:56.48:0,56,557	0/0:19,0:19:51.11:0,51,520	1/1:2,14:15:48.15:600,48,0	0/0:14,0:14:24.02:0,24,237	0/0:24,0:24:63.13:0,63,637	0/0:31,0:31:72.14:0,72,733	0/0:11,0:11:27.80:0,28,256	0/0:16,0:16:48.10:0,48,485	0/0:13,0:13:36.03:0,36,356	0/0:17,0:17:42.09:0,42,428	0/0:24,0:24:63.14:0,63,641	0/0:19,0:18:48.11:0,48,489	0/0:23,0:23:41.57:0,42,576	1/1:6,12:18:42.13:525,42,0	1/1:6,24:29:81.20:987,81,0	1/1:1,2:3:6.02:75,6,0	0/0:19,0:19:54.11:0,54,546	0/0:22,0:21:38.95:0,39,395	0/0:14,0:13:38.96:0,39,383	0/0:25,0:25:53.14:0,53,519	0/0:20,0:20:48.09:0,48,484	1/1:2,20:22:66.21:822,66,0	0/0:8,0:8:24.05:0,24,243
chr10	83731477	.	AAC	A	2099.16	PASS	AB=0.992;AC=27;AF=0.482;AN=56;BaseQRankSum=11.679;DP=560;FS=0.338;HRun=0;HaplotypeScore=130.5704;InbreedingCoeff=0.1745;MQ=60.80;MQ0=5;MQRankSum=-1.887;QD=5.31;ReadPosRankSum=3.145;VQSLOD=2.7285;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:26:6.15:0,6,111	0/1:11,0:11:36.35:36,0,53	0/1:22,0:7:10.28:10,0,99	0/1:28,0:9:7.29:7,0,77	1/1:24,0:24:16.95:219,17,0	0/0:23,0:23:68.68:0,69,869	0/1:18,0:18:71.87:72,0,88	1/1:22,0:19:25.28:185,25,0	0/0:13,0:12:32.68:0,33,426	0/1:23,0:23:93.38:100,0,93	1/1:31,1:32:15.97:271,16,0	0/0:11,0:11:31.76:0,32,339	0/1:17,0:17:48.56:132,0,49	1/1:13,0:13:29.39:134,29,0	1/1:18,0:18:6.96:132,7,0	1/1:25,0:25:9.37:161,9,0	0/1:21,0:20:25.36:116,0,25	0/0:23,0:23:28.72:0,29,696	0/1:20,1:20:26.87:144,0,27	0/1:32,0:30:97.47:173,0,97	1/1:2,0:2:4.88:19,5,0	1/1:20,0:20:21.67:132,22,0	0/0:20,0:19:47.59:0,48,537	0/0:16,0:15:39.92:0,40,501	0/1:21,1:22:25.05:70,0,25	0/0:25,0:22:41.21:0,41,798	0/1:24,0:24:26.47:176,0,26	0/0:8,0:8:24.08:0,24,354
chr10	83731479	.	CAA	C	7964.43	PASS	AB=0.984;AC=38;AF=0.679;AN=56;BaseQRankSum=8.103;DP=566;FS=1.658;HRun=12;HaplotypeScore=113.2752;InbreedingCoeff=0.8581;MQ=61.40;MQ0=8;MQRankSum=-1.492;QD=19.01;ReadPosRankSum=1.981;VQSLOD=4.1574;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:25:29.29:183,29,0	1/1:3,5:9:3.46:163,3,0	0/1:23,0:8:1.50:2,0,75	0/1:29,0:9:2.41:2,0,48	1/1:1,22:23:57.41:561,57,0	0/0:20,0:23:61.67:0,62,829	1/1:7,10:18:29.78:357,30,0	1/1:4,16:18:48.02:467,48,0	0/0:14,0:13:36.12:0,36,518	1/1:7,14:23:44.61:489,45,0	1/1:6,26:32:81.04:804,81,0	0/0:12,0:12:30.09:0,30,414	1/1:7,11:18:22.17:361,22,0	1/1:0,12:12:36.08:366,36,0	1/1:0,15:16:38.81:449,39,0	1/1:5,18:23:63.11:632,63,0	1/1:8,13:21:37.21:447,37,0	0/0:24,0:24:66.67:0,67,903	1/1:12,13:22:13.27:466,13,0	1/1:14,19:31:69.08:700,69,0	1/1:0,2:2:6.01:61,6,0	1/1:1,19:20:54.10:549,54,0	0/0:19,0:20:47.56:0,48,566	0/0:16,0:15:33.09:0,33,454	1/1:3,19:22:22.31:377,22,0	0/0:29,0:26:70.43:0,70,920	1/1:5,16:22:47.77:530,48,0	0/0:8,0:8:24.08:0,24,358
chr10	83731512	.	CA	C	4492.16	PASS	AB=0.625;AC=23;AF=0.411;AN=56;BaseQRankSum=10.162;DP=589;FS=0.000;HRun=10;HaplotypeScore=114.1265;InbreedingCoeff=0.9470;MQ=63.48;MQ0=9;MQRankSum=-7.120;QD=19.03;ReadPosRankSum=0.948;VQSLOD=4.3389;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:26:53.27:0,53,296	1/1:2,7:9:20.58:166,21,0	0/0:29,0:10:6.88:0,7,92	0/0:26,0:11:24.68:0,25,193	0/0:24,0:23:60.16:0,60,663	0/0:25,1:26:40.07:0,40,649	1/1:3,9:12:32.35:256,32,0	1/1:5,11:13:29.98:259,30,0	0/0:13,0:13:39.11:0,39,431	1/1:2,22:24:68.35:579,68,0	1/1:7,21:28:59.71:506,60,0	0/0:18,0:18:45.02:0,45,457	0/0:13,0:14:35.92:0,36,367	0/0:16,1:18:18.91:0,19,412	1/1:4,14:18:44.99:390,45,0	1/1:3,21:24:62.98:546,63,0	1/1:6,12:18:21.73:249,22,0	0/0:28,0:28:75.01:0,75,799	1/1:8,17:25:47.91:404,48,0	1/1:7,21:28:45.57:481,46,0	0/1:4,6:10:0.33:135,0,0	0/0:25,0:25:43.19:0,43,675	0/0:20,0:21:47.88:0,48,492	0/0:16,0:15:36.05:0,36,377	0/0:19,0:18:39.11:0,39,431	0/0:27,1:28:54.35:0,54,780	1/1:4,20:24:59.98:520,60,0	0/0:20,0:20:51.12:0,51,553
chr10	83731830	.	TAATG	T	5199.57	PASS	AC=26;AF=0.500;AN=52;BaseQRankSum=3.670;DP=715;FS=0.000;HRun=0;HaplotypeScore=138.3953;InbreedingCoeff=0.9489;MQ=64.48;MQ0=4;MQRankSum=-3.127;QD=16.00;ReadPosRankSum=2.135;VQSLOD=4.0743;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:5.12:0,5,512	1/1:4,3:7:3.01:47,3,0	./.	./.	0/0:15,0:32:54.03:0,54,860	0/0:22,0:22:45.12:0,45,966	1/1:16,12:28:15.05:230,15,0	1/1:35,0:34:23.43:148,23,0	0/0:22,0:22:39.09:0,39,779	1/1:13,3:16:26.69:264,27,0	1/1:16,12:28:35.95:519,36,0	0/0:24,0:24:48.15:0,48,1060	0/0:15,0:32:36.11:0,36,598	0/0:19,0:26:15.02:0,15,265	1/1:21,18:39:36.12:559,36,0	1/1:10,18:28:39.03:606,39,0	1/1:12,8:20:33.01:458,33,0	0/0:22,0:22:33.05:0,33,576	1/1:17,5:21:18.02:253,18,0	1/1:15,9:24:39.03:530,39,0	1/1:24,11:35:29.97:439,30,0	0/0:12,0:26:37.37:0,37,620	0/0:23,0:23:39.13:0,39,910	0/0:32,0:32:57.14:0,57,1229	0/0:8,0:16:21.07:0,21,367	0/0:24,0:24:39.13:0,39,901	1/1:10,15:25:30.10:466,30,0	1/1:2,16:18:45.15:681,45,0
chr10	83731869	.	T	TGAAC	2737.07	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=1.289;DP=695;FS=0.982;HRun=0;HaplotypeScore=146.6135;InbreedingCoeff=0.0719;MQ=64.47;MQ0=8;MQRankSum=-0.284;QD=12.56;ReadPosRankSum=2.686;VQSLOD=3.4922;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,36:43:46.55:1183,47,0	0/0:9,0:9:17.98:0,18,153	0/0:15,0:10:29.90:0,30,332	0/0:19,0:18:37.34:0,37,446	0/1:35,0:34:99:446,0,293	0/0:26,0:26:72.09:0,72,1031	0/0:23,0:23:36.89:0,37,298	0/1:31,0:30:44.05:44,0,378	0/0:16,0:16:48.11:0,48,751	0/1:21,0:20:23.65:24,0,311	0/0:27,0:26:46.77:0,47,478	0/0:28,0:28:77.48:0,77,1071	0/1:32,0:32:99:421,0,186	0/1:17,0:17:99:100,0,221	0/0:30,0:30:69.01:0,69,637	0/0:25,0:25:56.85:0,57,554	0/0:20,0:20:18.02:0,18,434	0/0:17,0:17:50.94:0,51,624	0/0:30,0:27:57.56:0,58,499	0/0:22,0:22:49.58:0,50,448	0/0:25,0:25:62.11:0,62,548	0/1:28,0:28:99:379,0,271	0/0:24,0:24:69.08:0,69,953	0/0:36,0:36:99:0,108,1342	0/1:11,0:11:44.89:287,0,45	0/0:30,0:30:81.17:0,81,1118	0/0:28,0:28:62.96:0,63,568	0/0:27,0:27:72.06:0,72,732
chr10	83731971	.	C	CTT	6898.97	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-8.961;DP=547;FS=3.243;HRun=9;HaplotypeScore=75.7144;InbreedingCoeff=0.9920;MQ=71.93;MQ0=6;MQRankSum=-1.798;QD=28.63;ReadPosRankSum=-1.872;VQSLOD=4.7507;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.05:0,60,602	1/1:0,5:5:12.04:185,12,0	0/0:30,0:17:30.13:0,30,267	0/0:34,0:22:18.22:0,18,226	0/0:23,0:23:66.11:0,66,681	0/0:17,0:17:39.07:0,39,414	1/1:11,7:18:36.16:458,36,0	1/1:4,25:31:74.17:1018,74,0	0/0:10,0:10:24.05:0,24,255	1/1:4,22:26:57.13:808,57,0	1/1:3,13:17:36.08:517,36,0	0/0:12,0:13:38.83:0,39,394	0/0:14,0:14:33.06:0,33,351	0/0:8,0:8:21.05:0,21,223	1/1:14,6:20:40.94:552,41,0	1/1:4,18:23:38.62:561,39,0	1/1:3,27:30:51.17:785,51,0	0/0:24,0:24:54.10:0,54,574	1/1:3,19:23:62.54:881,63,0	1/1:5,14:18:36.12:533,36,0	1/1:4,11:14:21.07:323,21,0	0/0:17,0:17:45.10:0,45,478	0/0:14,0:14:36.08:0,36,382	0/0:29,0:29:84.21:0,84,892	0/0:17,0:17:42.07:0,42,447	0/0:21,0:22:45.02:0,45,533	1/1:9,5:13:20.10:278,20,0	0/0:9,0:9:24.06:0,24,255
chr10	83732231	.	A	ATTT	4648.44	PASS	AB=0.556;AC=25;AF=0.446;AN=56;BaseQRankSum=7.557;DP=601;FS=7.419;HRun=12;HaplotypeScore=93.1036;InbreedingCoeff=0.8921;MQ=71.38;MQ0=2;MQRankSum=0.023;QD=15.86;ReadPosRankSum=-2.039;VQSLOD=2.9165;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,28:41:67.71:1076,68,0	0/1:2,0:10:31.51:91,0,32	0/0:14,0:14:10.91:0,11,141	0/0:11,0:10:2.23:0,2,35	0/0:26,0:29:55:0,55,600	0/0:23,0:25:53.94:0,54,589	1/1:1,0:20:40.17:285,40,0	1/1:12,1:36:65.83:563,66,0	0/0:26,0:26:53.89:0,54,594	1/1:8,1:23:38.93:346,39,0	1/1:5,0:26:49.01:363,49,0	0/0:21,0:23:32.81:0,33,392	0/0:13,0:13:29.99:0,30,336	0/0:18,0:19:41.93:0,42,455	1/1:3,2:35:58.15:487,58,0	1/1:5,0:22:37.12:279,37,0	1/1:5,0:20:37.11:277,37,0	0/0:13,0:13:31.43:0,31,367	1/1:9,0:20:32.86:251,33,0	1/1:3,1:13:29.94:273,30,0	1/1:5,0:13:20.42:143,20,0	0/0:22,0:24:52.53:0,53,602	0/0:20,0:21:37.54:0,38,418	0/0:25,0:29:35.49:0,35,593	0/0:16,0:16:42.04:0,42,461	0/0:28,0:29:49.92:0,50,596	1/1:4,1:13:23.93:215,24,0	0/0:12,0:13:14.83:0,15,363
chr10	83732738	.	ACTCAC	A	859.97	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.640;DP=598;FS=5.255;HRun=0;HaplotypeScore=108.0730;InbreedingCoeff=0.9950;MQ=60.40;MQ0=2;MQRankSum=-2.384;QD=35.83;ReadPosRankSum=0.853;VQSLOD=2.9210;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:45.10:955,45,0	0/0:13,0:13:39.13:0,39,1250	0/0:27,0:26:78.11:0,78,2198	0/0:26,0:23:66.06:0,66,1930	0/0:21,0:21:60.21:0,60,1890	0/0:15,0:15:45.15:0,45,1453	0/0:29,0:29:81.28:0,81,2588	0/0:23,0:23:69.23:0,69,2164	0/0:22,0:22:66.21:0,66,2034	0/0:19,0:19:57.20:0,57,1747	0/0:17,0:17:51.15:0,51,1569	0/0:16,0:16:48.16:0,48,1503	0/0:25,0:25:75.26:0,75,2416	0/0:17,0:17:51.18:0,51,1647	0/0:26,0:26:78.27:0,78,2478	0/0:26,0:26:78.26:0,78,2400	0/0:40,0:40:99:0,120,3835	0/0:24,0:24:72.20:0,72,2240	0/0:23,0:22:57.20:0,57,1841	0/0:19,0:19:57.20:0,57,1823	0/0:37,0:37:99:0,108,3462	0/0:10,0:10:30.09:0,30,897	0/0:11,0:11:33.11:0,33,1065	0/0:23,0:23:69.24:0,69,2229	0/0:13,0:13:36.12:0,36,1114	0/0:29,0:29:87.30:0,87,2773	0/0:16,0:16:48.14:0,48,1404	0/0:7,0:7:21.07:0,21,677
chr10	83732841	.	G	GGTTT	7906.25	PASS	AB=0.581;AC=23;AF=0.411;AN=56;BaseQRankSum=-2.422;DP=618;FS=32.582;HRun=0;HaplotypeScore=124.6834;InbreedingCoeff=0.8960;MQ=63.25;MQ0=6;MQRankSum=1.692;QD=33.08;ReadPosRankSum=-1.220;VQSLOD=2.4585;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:34:19.30:0,19,193	1/1:8,0:8:15.05:281,15,0	0/0:25,0:21:3.01:0,3,47	0/0:24,0:20:9.03:0,9,123	0/1:5,12:18:5.10:853,0,5	0/0:17,0:17:33.11:0,33,519	1/1:31,0:31:51.17:961,51,0	0/0:22,0:21:21.06:0,21,307	0/0:17,0:27:57.12:0,57,700	1/1:21,0:21:36.56:580,37,0	1/1:18,0:18:33.11:610,33,0	0/0:17,0:17:42.13:0,42,640	1/1:12,14:27:39.13:925,39,0	1/1:3,13:19:33.11:783,33,0	1/1:24,0:22:39.13:707,39,0	1/1:22,0:22:39.13:705,39,0	1/1:26,0:26:33.11:627,33,0	0/0:22,0:22:33.05:0,33,468	0/0:27,0:27:18:0,18,233	0/0:29,0:29:54.17:0,54,807	0/0:32,0:32:33.10:0,33,496	1/1:6,11:18:31.24:660,31,0	0/0:9,0:9:18.06:0,18,284	0/0:36,0:36:64.28:0,64,1232	1/1:2,5:6:9.03:214,9,0	0/0:26,0:26:45.15:0,45,689	0/0:24,0:23:42.12:0,42,618	0/0:8,0:7:18.05:0,18,261
chr10	83732842	.	G	GTTTT	10568.56	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=-3.795;DP=628;FS=23.127;HRun=3;HaplotypeScore=119.1158;InbreedingCoeff=0.2694;MQ=62.04;MQ0=6;MQRankSum=-1.157;QD=27.31;ReadPosRankSum=-0.170;VQSLOD=0.7653;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:66.58:0,67,535	1/1:0,8:8:20.81:436,21,0	0/0:25,0:21:33.12:0,33,593	0/0:22,0:18:47.22:0,47,573	0/1:19,0:19:97.72:549,0,98	0/0:17,0:17:48.09:0,48,717	1/1:0,31:32:51.18:1373,51,0	0/1:22,0:21:64.20:258,0,64	0/0:27,0:27:78.15:0,78,1005	1/1:3,20:24:57.53:1122,58,0	1/1:2,17:19:53.93:1048,54,0	0/0:17,0:17:48.12:0,48,797	0/1:26,0:26:82.78:549,0,83	0/1:19,0:19:31.84:475,0,32	1/1:5,22:26:48.16:1267,48,0	1/1:0,22:22:39.13:1052,39,0	1/1:4,24:28:39.13:1008,39,0	0/0:22,0:22:60:0,60,778	0/1:27,0:27:75.04:379,0,75	0/1:30,0:30:99:177,0,263	0/1:31,0:31:99:252,0,152	0/1:21,0:21:77.80:386,0,78	0/0:8,0:8:24.05:0,24,372	0/0:35,0:35:99:0,104,1617	0/1:7,0:6:33.94:123,0,34	0/0:27,0:27:47.16:0,47,1013	0/1:24,0:23:99:116,0,193	0/0:8,0:7:21.04:0,21,341
chr10	83732927	.	G	GC	1281.68	PASS	AB=0.533;AC=22;AF=0.393;AN=56;BaseQRankSum=15.271;DP=389;FS=16.163;HRun=0;HaplotypeScore=96.8088;InbreedingCoeff=0.8468;MQ=77.18;MQ0=0;MQRankSum=-14.214;QD=9.42;ReadPosRankSum=1.888;VQSLOD=2.8948;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:51.17:0,51,711	1/1:0,4:4:11.14:51,11,0	0/0:17,0:17:48.13:0,48,636	0/0:11,0:11:27.08:0,27,360	0/0:21,0:21:60.18:0,60,834	0/0:18,0:18:54.16:0,54,732	1/1:3,15:18:45.37:200,45,0	1/1:3,20:23:63.43:363,63,0	0/0:14,0:14:42.14:0,42,582	1/1:1,10:11:31.82:178,32,0	1/1:0,8:8:15.81:62,16,0	0/0:18,0:18:54.17:0,54,737	0/0:15,0:15:42.14:0,42,585	0/0:13,0:13:30.09:0,30,402	1/1:1,14:13:37.20:153,37,0	0/1:1,12:13:6.10:105,0,6	1/1:0,12:12:24.89:117,25,0	0/0:14,0:14:42.12:0,42,566	1/1:1,3:4:11.63:73,12,0	1/1:0,5:5:10.18:39,10,0	0/1:2,10:12:16.12:48,0,16	0/0:11,0:11:33.11:0,33,461	0/0:10,0:10:30.10:0,30,418	0/0:34,0:34:99:0,102,1426	0/0:8,0:8:24.08:0,24,336	0/0:18,1:19:42.82:0,43,741	1/1:1,10:11:24.73:110,25,0	0/0:9,0:9:27.09:0,27,377
chr10	83732928	.	T	TC	1080.30	PASS	AB=0.522;AC=22;AF=0.393;AN=56;BaseQRankSum=15.152;DP=381;FS=15.304;HRun=0;HaplotypeScore=95.9369;InbreedingCoeff=0.8398;MQ=75.45;MQ0=0;MQRankSum=-14.580;QD=8.25;ReadPosRankSum=2.571;VQSLOD=2.5747;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:51.17:0,51,703	1/1:0,4:4:10.88:47,11,0	0/0:17,0:17:45.15:0,45,616	0/0:10,0:10:30.09:0,30,406	0/0:21,0:21:60.18:0,60,839	0/0:17,0:17:51.17:0,51,713	1/1:2,15:17:41.50:177,42,0	1/1:0,20:20:54.33:277,54,0	0/0:14,0:14:42.14:0,42,586	1/1:1,10:11:15.66:134,16,0	1/1:0,8:8:15.44:58,15,0	0/0:17,0:17:51.17:0,51,713	0/0:15,0:15:42.14:0,42,587	0/0:13,0:13:30.09:0,30,405	1/1:1,14:13:32.05:130,32,0	0/1:1,12:13:6.51:100,0,7	1/1:0,12:12:24.60:113,25,0	0/0:14,0:14:42.13:0,42,571	1/1:1,3:4:10.66:51,11,0	1/1:0,5:5:9.68:35,10,0	0/1:1,10:11:23.16:68,0,23	0/0:11,0:11:33.11:0,33,461	0/0:10,0:10:30.10:0,30,420	0/0:34,0:34:99:0,102,1427	0/0:8,0:8:24.08:0,24,336	0/0:18,1:19:43.12:0,43,742	1/1:1,10:11:24.22:105,24,0	0/0:9,0:9:27.09:0,27,378
chr10	83732932	.	A	AG	4684.53	PASS	AB=0.565;AC=23;AF=0.411;AN=56;BaseQRankSum=15.158;DP=408;FS=17.749;HRun=0;HaplotypeScore=96.3712;InbreedingCoeff=0.8908;MQ=72.22;MQ0=0;MQRankSum=-15.102;QD=29.84;ReadPosRankSum=0.257;VQSLOD=3.4997;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:48.16:0,48,671	1/1:1,4:5:12.04:139,12,0	0/0:19,0:20:57.23:0,57,746	0/0:11,0:11:30.08:0,30,371	0/0:20,0:20:57.13:0,57,769	0/0:18,0:18:54.16:0,54,737	1/1:4,15:19:54.14:610,54,0	1/1:4,20:24:66.20:810,66,0	0/0:14,0:14:42.11:0,42,548	1/1:2,10:12:36.11:446,36,0	1/1:1,8:9:21.06:237,21,0	0/0:17,0:17:51.16:0,51,695	0/0:14,0:14:39.13:0,39,545	0/0:11,0:11:24.07:0,24,319	1/1:3,15:16:48.13:552,48,0	1/1:2,12:14:3.19:411,3,0	1/1:2,12:14:30.09:345,30,0	0/0:15,0:15:43.34:0,43,568	1/1:4,5:8:21.07:283,21,0	1/1:1,5:6:12.03:135,12,0	0/1:3,10:13:18.60:228,0,19	0/0:11,0:11:27.09:0,27,376	0/0:10,0:10:30.10:0,30,419	0/0:34,0:34:99:0,102,1425	0/0:7,0:7:21.07:0,21,294	0/0:19,1:20:20.86:0,21,719	1/1:4,10:14:39.12:487,39,0	0/0:9,0:9:27.09:0,27,376
chr10	83733304	.	ATTCTTT	A	7966.02	PASS	AB=0.533;AC=21;AF=0.375;AN=56;BaseQRankSum=4.738;DP=430;FS=5.239;HRun=0;HaplotypeScore=97.9286;InbreedingCoeff=0.8842;MQ=66.19;MQ0=9;MQRankSum=-6.711;QD=41.06;ReadPosRankSum=3.046;VQSLOD=4.3331;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:26.84:0,27,407	1/1:0,7:7:12.04:277,12,0	0/0:24,0:14:32.68:0,33,459	0/0:13,0:10:13.48:0,13,180	0/0:22,0:22:63.17:0,63,1440	0/0:15,0:15:45.06:0,45,947	1/1:3,16:19:39.13:900,39,0	1/1:3,32:35:96.51:1624,97,0	0/0:7,0:7:21.07:0,21,540	1/1:0,15:17:48.08:774,48,0	1/1:0,8:8:15.43:242,15,0	0/0:19,0:19:51.08:0,51,1030	0/0:9,0:9:24.54:0,25,556	0/0:9,0:9:24.06:0,24,558	1/1:0,16:16:39.13:870,39,0	0/1:3,20:24:21.67:887,0,22	1/1:3,16:20:18.06:396,18,0	0/0:13,0:12:36.11:0,36,869	1/1:5,16:21:45.12:807,45,0	1/1:1,11:12:33.04:624,33,0	0/0:3,2:4:3.01:0,3,52	0/0:11,0:11:27.09:0,27,663	0/0:13,0:13:39.10:0,39,979	0/0:15,0:15:38.86:0,39,858	0/0:15,0:15:24.08:0,24,510	0/0:23,0:23:60.08:0,60,1197	1/1:0,14:14:27.09:563,27,0	0/0:6,0:5:15.05:0,15,386
chr10	83733306	.	TC	T	3498.97	PASS	AB=0.969;AC=24;AF=0.429;AN=56;BaseQRankSum=10.659;DP=425;FS=29.323;HRun=1;HaplotypeScore=77.8044;InbreedingCoeff=0.8699;MQ=64.32;MQ0=15;MQRankSum=-6.818;QD=16.66;ReadPosRankSum=2.291;VQSLOD=2.3556;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:14.51:0,15,148	1/1:7,0:7:12:103,12,0	0/0:23,0:13:22.27:0,22,205	0/0:12,0:9:7.60:0,8,85	0/0:22,0:22:49.92:0,50,441	0/0:15,0:15:34.82:0,35,277	1/1:16,1:17:38.99:335,39,0	1/1:34,0:34:92.80:776,93,0	0/0:7,0:7:17.24:0,17,150	1/1:18,0:17:47.97:407,48,0	1/1:9,0:8:17.86:131,18,0	0/0:16,1:17:43.79:0,44,347	0/0:10,0:9:19.64:0,20,166	0/0:8,0:8:22.61:0,23,175	1/1:16,0:16:38.92:321,39,0	1/1:24,1:24:35.43:349,35,0	1/1:17,1:18:17.98:152,18,0	0/0:15,0:12:13.20:0,13,208	1/1:21,0:20:55.20:446,55,0	1/1:11,1:12:32.79:258,33,0	0/1:4,0:3:0:0,0,0	0/0:12,0:12:26.59:0,27,222	0/0:13,0:13:38.64:0,39,382	0/0:15,0:15:38.10:0,38,324	0/1:14,1:15:8.65:9,0,73	0/0:23,1:23:24.41:0,24,374	1/1:14,0:14:26.79:210,27,0	0/0:6,0:5:5.96:0,6,71
chr10	83733307	.	CT	C	538.76	PASS	AB=0.942;AC=28;AF=0.500;AN=56;BaseQRankSum=7.668;DP=457;FS=3.001;HRun=16;HaplotypeScore=98.8828;InbreedingCoeff=0.5277;MQ=61.34;MQ0=17;MQRankSum=-6.023;QD=1.77;ReadPosRankSum=4.309;VQSLOD=-0.3054;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:23:13.71:0,14,72	1/1:7,0:7:8.15:25,8,0	0/0:23,0:13:14.98:0,15,89	0/0:11,0:8:2.47:0,2,19	0/1:22,3:25:1.24:1,0,259	0/1:15,3:18:44.70:45,0,94	1/1:17,0:17:26.48:82,26,0	1/1:34,0:34:32.81:101,33,0	0/0:8,0:8:18.77:0,19,137	1/1:18,0:17:18.27:57,18,0	1/1:9,0:8:4.92:15,5,0	0/0:20,0:20:4.13:0,4,123	0/1:14,0:13:0.63:1,0,110	0/0:11,0:11:23.80:0,24,173	1/1:16,0:16:22.56:68,23,0	1/1:24,0:24:16.70:69,17,0	1/1:18,0:18:11.78:35,12,0	0/1:14,1:12:21.02:21,0,146	0/1:21,0:20:6.82:24,0,7	1/1:12,0:12:15.73:49,16,0	0/0:4,0:3:2.97:0,3,20	0/0:12,0:12:14.83:0,15,115	0/0:13,0:13:29.93:0,30,241	0/0:18,0:17:22.69:0,23,156	1/1:5,11:16:14.57:90,15,0	0/1:23,1:24:6.10:6,0,131	1/1:14,0:14:14.01:43,14,0	0/0:9,1:8:5.68:0,6,127
chr10	83734159	.	TGG	T	6316.52	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=5.339;DP=546;FS=23.883;HRun=5;HaplotypeScore=108.4193;InbreedingCoeff=0.9736;MQ=64.52;MQ0=4;MQRankSum=-9.113;QD=30.96;ReadPosRankSum=0.987;VQSLOD=3.3447;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:90.27:0,90,1561	1/1:1,1:2:3.01:41,3,0	0/0:32,0:27:73.04:0,73,1128	0/0:20,0:15:30.88:0,31,518	0/0:26,0:26:69.01:0,69,845	0/0:23,0:23:63.22:0,63,1141	1/1:0,14:14:27.09:371,27,0	1/1:2,20:22:60.19:817,60,0	0/0:25,0:25:69.24:0,69,1243	1/1:2,15:17:45.14:601,45,0	1/1:2,16:15:42.09:542,42,0	0/0:19,0:19:54.17:0,54,948	0/0:15,0:15:42.10:0,42,575	0/0:14,0:14:39.11:0,39,517	1/1:2,12:13:33.11:445,33,0	1/1:1,22:23:66.22:896,66,0	1/1:2,25:22:48.16:645,48,0	0/0:13,0:13:35.40:0,35,653	1/1:6,12:18:42.12:564,42,0	1/1:3,16:19:36.12:494,36,0	1/1:2,8:8:16.30:244,16,0	0/0:13,0:13:35.94:0,36,437	0/0:22,0:22:54.18:0,54,955	0/0:11,0:11:33.07:0,33,542	0/0:21,0:21:60.18:0,60,799	0/0:26,0:26:78.27:0,78,1419	1/1:0,20:20:48.16:657,48,0	0/0:25,0:25:75.19:0,75,1263
chr10	83734169	.	TTTG	T	4680.06	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=13.145;DP=537;FS=25.023;HRun=0;HaplotypeScore=124.9993;InbreedingCoeff=0.9498;MQ=59.21;MQ0=4;MQRankSum=-8.108;QD=16.31;ReadPosRankSum=1.138;VQSLOD=2.9760;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:38:57.08:0,57,697	1/1:0,1:1:3.01:41,3,0	0/0:30,0:23:24.05:0,24,377	0/0:20,0:15:17.58:0,18,265	1/1:23,0:23:21.67:81,22,0	0/0:24,0:24:66.20:0,66,1286	1/1:11,4:15:18.05:231,18,0	1/1:18,5:23:26.99:302,27,0	0/0:23,0:23:57.20:0,57,1143	1/1:6,10:16:33.10:426,33,0	1/1:7,9:13:27.08:351,27,0	0/0:17,0:17:39.13:0,39,772	1/1:16,0:16:25.54:84,26,0	1/1:16,0:16:9.60:56,10,0	1/1:5,10:13:24.08:327,24,0	1/1:4,20:23:60.19:803,60,0	1/1:15,13:23:44.70:534,45,0	0/0:16,0:16:36.59:0,37,696	1/1:8,9:17:27.05:335,27,0	1/1:9,7:16:24.01:288,24,0	1/1:6,5:9:12:142,12,0	1/1:11,0:11:10.98:32,11,0	0/0:20,0:20:45.13:0,45,851	0/0:11,0:11:14.97:0,15,258	1/1:18,0:18:25.13:77,25,0	0/0:26,0:26:57.17:0,57,1025	1/1:9,12:21:45.12:571,45,0	0/0:24,1:25:17.84:0,18,1049
chr10	83734171	.	TG	T	5021.56	PASS	AB=0.995;AC=25;AF=0.446;AN=56;BaseQRankSum=10.521;DP=536;FS=8.831;HRun=1;HaplotypeScore=102.4702;InbreedingCoeff=0.1787;MQ=58.21;MQ0=4;MQRankSum=-6.618;QD=16.09;ReadPosRankSum=3.852;VQSLOD=4.5945;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:76.82:0,77,685	1/1:1,0:1:2.98:21,3,0	0/0:30,0:23:62.13:0,62,686	0/1:18,1:14:51.47:51,0,172	1/1:0,23:23:69.17:870,69,0	0/0:24,0:24:69.21:0,69,955	0/1:15,0:15:53.10:96,0,53	0/1:22,0:22:99:109,0,188	0/0:22,0:22:60.20:0,60,849	0/1:17,0:17:31.32:209,0,31	0/1:16,0:13:20.47:148,0,20	0/0:17,0:17:51.16:0,51,690	1/1:1,15:16:39.13:543,39,0	1/1:2,15:17:39.08:485,39,0	0/1:15,0:13:9.71:139,0,10	1/1:24,0:23:8.57:334,9,0	0/1:29,0:24:23.23:229,0,23	0/0:15,0:15:41.45:0,41,541	0/1:17,0:17:99:119,0,108	0/1:15,0:15:61.41:112,0,61	0/1:13,0:11:36.45:82,0,36	1/1:1,10:11:33.11:453,33,0	0/0:20,0:20:57.03:0,57,727	0/0:10,0:10:24.01:0,24,281	1/1:0,19:19:54.18:730,54,0	0/0:25,0:25:75.21:0,75,969	0/1:23,0:23:18.30:292,0,18	0/0:24,0:24:63.99:0,64,895
chr10	83735142	.	GA	G	6029.21	PASS	AB=0.986;AC=49;AF=0.875;AN=56;BaseQRankSum=1.356;DP=616;FS=4.093;HRun=1;HaplotypeScore=142.0210;InbreedingCoeff=-0.1363;MQ=62.66;MQ0=2;MQRankSum=-1.939;QD=9.79;ReadPosRankSum=8.599;VQSLOD=2.3435;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:65.01:340,65,0	0/1:8,0:8:24.57:41,0,25	0/1:33,2:21:37.04:37,0,126	0/1:39,2:29:36.70:37,0,222	1/1:21,0:21:50.38:250,50,0	1/1:22,0:21:27.49:196,27,0	1/1:15,0:15:16.98:173,17,0	0/1:20,0:20:9.92:115,0,10	1/1:28,0:28:53.87:333,54,0	1/1:29,0:29:75.48:354,75,0	1/1:15,0:15:39.79:213,40,0	1/1:16,0:16:41.41:192,41,0	1/1:23,0:23:9.99:213,10,0	1/1:21,0:21:58.91:290,59,0	1/1:27,0:26:51.12:321,51,0	1/1:31,0:31:62.38:414,62,0	0/1:12,0:11:18.02:109,0,18	1/1:12,0:11:25.41:128,25,0	0/1:12,0:12:20.47:66,0,20	1/1:26,0:26:69.69:347,70,0	1/1:29,0:29:71.41:323,71,0	1/1:13,0:13:8.16:123,8,0	1/1:22,0:22:56.39:303,56,0	1/1:28,0:28:47.48:284,47,0	1/1:15,0:15:36.25:193,36,0	1/1:22,0:22:28.72:207,29,0	0/1:18,0:18:1.69:138,0,2	1/1:26,0:26:59.02:289,59,0
chr10	83735196	.	AG	A	4191.73	PASS	AB=0.773;AC=14;AF=0.250;AN=56;BaseQRankSum=8.866;DP=630;FS=0.000;HRun=2;HaplotypeScore=145.5575;InbreedingCoeff=0.8212;MQ=51.87;MQ0=24;MQRankSum=-5.531;QD=26.20;ReadPosRankSum=2.850;VQSLOD=3.3939;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:76.51:0,77,1089	1/1:0,5:5:15.05:194,15,0	0/0:28,0:7:15.05:0,15,198	0/1:33,0:11:4.96:5,0,343	0/0:16,0:16:39.13:0,39,566	0/0:21,0:21:57.18:0,57,822	1/1:1,12:13:39.11:487,39,0	0/0:35,0:35:79.27:0,79,1075	0/0:35,0:34:93.30:0,93,1339	1/1:4,18:21:57.18:739,57,0	1/1:1,10:10:27.09:350,27,0	0/0:20,0:19:54.18:0,54,799	0/0:15,0:15:30.07:0,30,404	0/0:21,1:21:21.49:0,21,770	1/1:2,27:28:81.25:1035,81,0	0/1:6,30:35:27.42:1102,0,27	1/1:2,9:11:23.74:279,24,0	0/0:19,1:19:26.19:0,26,622	0/0:24,0:21:57.11:0,57,761	0/0:10,0:9:18.02:0,18,244	0/0:55,1:53:99:0,129,1868	0/0:16,0:15:33.11:0,33,482	0/0:18,0:18:48.16:0,48,706	0/0:25,1:25:31.60:0,32,897	0/0:19,0:19:44.30:0,44,578	0/0:19,1:20:21.27:0,21,806	0/0:23,0:23:60.19:0,60,864	0/0:16,0:14:36.11:0,36,510
chr10	83735619	.	G	GT	19129.79	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-7.219;DP=718;FS=6.620;HRun=1;HaplotypeScore=70.2946;InbreedingCoeff=0.9988;MQ=86.21;MQ0=0;MQRankSum=-2.565;QD=40.19;ReadPosRankSum=1.265;VQSLOD=5.4713;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:93.32:1393,93,0	1/1:0,7:7:18.06:270,18,0	0/0:18,0:18:48.16:0,48,622	0/0:28,0:28:72.16:0,72,868	1/1:0,22:22:66.18:964,66,0	0/0:31,0:31:90.29:0,90,1169	1/1:0,30:30:78.26:1169,78,0	1/1:2,39:41:99:1713,117,0	0/0:23,0:23:66.21:0,66,857	1/1:1,24:25:72.22:1056,72,0	1/1:0,20:20:57.19:854,57,0	0/0:24,0:24:69.22:0,69,896	1/1:1,24:25:66.22:989,66,0	1/1:0,29:29:72.24:1077,72,0	1/1:1,36:37:96.33:1439,96,0	1/1:2,26:28:72.24:1079,72,0	1/1:1,24:25:57.19:854,57,0	0/0:18,0:18:48.13:0,48,606	1/1:3,19:22:60.19:878,60,0	1/1:0,24:24:66.22:988,66,0	1/1:1,38:39:99:1664,111,0	1/1:0,25:25:72.24:1079,72,0	0/0:23,0:23:63.20:0,63,818	0/0:24,0:24:66.21:0,66,857	1/1:2,15:17:42.14:629,42,0	0/0:38,0:38:99:0,111,1441	1/1:1,25:26:69.23:1034,69,0	0/0:15,0:15:45.15:0,45,584
chr10	83735962	.	T	TTG	1013.19	PASS	AB=0.823;AC=19;AF=0.380;AN=50;BaseQRankSum=-2.338;DP=538;FS=2.703;HRun=0;HaplotypeScore=100.4986;InbreedingCoeff=0.1196;MQ=58.12;MQ0=7;MQRankSum=1.527;QD=3.34;ReadPosRankSum=-1.248;VQSLOD=2.0988;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:33:8.54:83,9,0	0/1:9,2:10:33.69:71,0,34	./.	0/1:19,0:12:0:0,0,0	./.	0/0:19,0:21:9.32:0,9,80	0/1:12,3:17:52.99:77,0,53	./.	0/0:14,0:14:15.04:0,15,163	1/1:15,0:15:3:25,3,0	1/1:7,4:11:9.03:133,9,0	0/0:15,0:18:26.57:0,27,237	0/0:3,0:17:25.57:0,26,126	0/0:4,0:18:9.77:0,10,44	0/1:13,6:24:34.59:77,0,35	1/1:9,1:13:11.81:115,12,0	0/1:23,10:35:99:154,0,106	0/0:18,0:19:23.70:0,24,231	1/1:16,1:16:3.90:46,4,0	0/1:9,2:12:26.49:38,0,26	0/1:33,15:52:25.59:191,0,26	0/0:4,0:10:2.84:0,3,14	0/0:11,0:10:9:0,9,89	0/0:34,0:37:35.59:0,36,335	0/0:10,0:13:2.84:0,3,14	0/1:26,0:26:17.73:18,0,211	0/1:12,1:15:43.24:142,0,43	0/0:4,0:4:5.98:0,6,52
chr10	83736204	.	CT	C	3655.07	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=2.502;DP=442;FS=3.846;HRun=12;HaplotypeScore=60.7533;InbreedingCoeff=0.9434;MQ=67.16;MQ0=1;MQRankSum=2.389;QD=14.98;ReadPosRankSum=1.365;VQSLOD=4.5531;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,32:37:86.64:673,87,0	1/1:2,4:7:10.94:70,11,0	0/0:12,0:9:14.76:0,15,126	0/0:6,0:5:6.01:0,6,56	0/0:4,0:23:39.10:0,39,205	0/0:24,0:25:59.94:0,60,587	1/1:2,11:13:29.71:232,30,0	1/1:10,21:31:35.89:421,36,0	0/0:9,0:9:21.04:0,21,213	1/1:1,15:16:41.82:325,42,0	1/1:7,17:24:38.74:297,39,0	0/0:12,0:12:30.04:0,30,293	0/0:4,0:13:17.21:0,17,102	0/0:3,0:10:14.20:0,14,71	1/1:6,13:19:39.14:321,39,0	1/1:3,10:13:26.89:209,27,0	1/1:6,18:26:42.87:313,43,0	0/0:15,0:15:33.04:0,33,323	1/1:6,8:14:23.86:184,24,0	1/1:3,17:20:28.10:322,28,0	1/1:1,7:8:16.97:122,17,0	0/0:1,0:6:11.49:0,11,62	0/0:13,1:14:24.01:0,24,233	0/0:9,0:9:21.03:0,21,207	0/0:6,0:14:19.89:0,20,100	0/0:16,0:17:32.89:0,33,314	1/1:3,10:14:3.72:166,4,0	0/0:13,0:12:30.05:0,30,299
chr10	83736571	.	T	TTCTCCTATCCTG	40962.39	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-3.327;DP=704;FS=0.301;HRun=0;HaplotypeScore=221.8804;InbreedingCoeff=0.9999;MQ=72.59;MQ0=0;MQRankSum=-19.924;QD=118.05;ReadPosRankSum=-1.807;VQSLOD=4.1523;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,15:45:55.99:4196,56,0	1/1:6,7:17:39.13:2175,39,0	0/0:25,0:25:63.20:0,63,2088	0/0:19,0:19:47.99:0,48,1414	0/0:28,0:28:75.22:0,75,2523	0/0:32,0:32:90.27:0,90,2987	1/1:18,13:35:81.28:4583,81,0	1/1:21,4:27:72.23:3538,72,0	0/0:26,0:26:75.26:0,75,2655	1/1:15,8:23:63.22:3297,63,0	1/1:11,10:23:42.14:2377,42,0	0/0:35,0:35:99:0,99,3398	0/0:32,0:32:93.31:0,93,3294	0/0:34,0:34:99:0,99,3465	1/1:10,17:27:75.26:4153,75,0	1/1:11,11:27:63.22:3477,63,0	1/1:11,8:24:42.14:2291,42,0	0/0:11,0:11:33.11:0,33,1197	1/1:10,2:14:42.13:1694,42,0	1/1:17,9:28:57.19:3223,57,0	1/1:14,8:26:36.11:2098,36,0	0/0:25,0:25:69.22:0,69,2404	0/0:17,0:17:48.16:0,48,1685	0/0:20,0:20:57.20:0,57,2027	0/0:20,0:20:57.19:0,57,1993	0/0:22,0:22:60.21:0,60,2212	1/1:13,13:28:72.25:3863,72,0	0/0:11,0:11:30.09:0,30,856
chr10	83737623	.	GA	G	2584.26	PASS	AB=0.757;AC=26;AF=0.464;AN=56;BaseQRankSum=4.057;DP=487;FS=17.007;HRun=13;HaplotypeScore=67.5222;InbreedingCoeff=0.5023;MQ=75.64;MQ0=0;MQRankSum=-2.754;QD=8.88;ReadPosRankSum=3.140;VQSLOD=1.0650;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,12:19:0.56:152,0,1	1/1:2,6:8:17.86:131,18,0	0/1:13,0:12:2.23:2,0,94	0/0:11,0:11:5.37:0,5,35	0/0:22,0:22:38.96:0,39,353	0/0:20,0:21:41.87:0,42,366	1/1:2,15:17:15.55:277,16,0	1/1:8,15:23:40.25:288,40,0	0/0:19,1:21:29.83:0,30,405	1/1:8,13:22:37.71:268,38,0	0/1:3,4:7:40.45:70,0,40	0/0:20,0:20:29.99:0,30,267	0/1:14,2:17:29.89:30,0,190	0/0:12,0:12:26.89:0,27,238	1/1:6,20:27:46.48:334,46,0	1/1:7,15:23:11.54:239,12,0	1/1:6,19:25:12.53:255,13,0	0/0:12,0:12:30.02:0,30,280	1/1:4,15:20:40.75:289,41,0	0/1:6,9:15:34.63:107,0,35	0/1:2,9:13:1.24:137,0,1	0/1:6,1:7:0.89:1,0,146	0/1:7,1:8:9.89:10,0,76	0/0:28,0:28:63.03:0,63,587	0/0:20,0:20:24.50:0,25,231	0/0:17,1:20:25.80:0,26,377	1/1:13,14:27:3.07:189,3,0	0/0:9,0:9:20.98:0,21,189
chr10	83738109	.	T	TC	15938.19	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=14.049;DP=754;FS=4.928;HRun=1;HaplotypeScore=102.2335;InbreedingCoeff=0.9996;MQ=84.61;MQ0=0;MQRankSum=-4.038;QD=39.55;ReadPosRankSum=1.596;VQSLOD=5.0353;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:44:99:1834,123,0	1/1:0,11:11:33.11:495,33,0	0/0:19,0:19:54.10:0,54,620	0/0:27,0:27:60.19:0,60,763	0/0:20,0:20:54.17:0,54,693	0/0:13,0:13:36.12:0,36,467	1/1:2,38:40:87.29:1304,87,0	1/1:1,34:35:99:1544,105,0	0/0:32,0:32:93.29:0,93,1191	1/1:3,26:29:72.24:1074,72,0	1/1:1,7:8:24.08:346,24,0	0/0:35,0:35:99:0,105,1356	0/0:25,0:25:72.23:0,72,934	0/0:30,0:30:81.25:0,81,1036	1/1:0,24:24:63.21:944,63,0	1/1:1,37:38:99:1475,99,0	1/1:1,44:44:99:1843,123,0	0/0:28,0:28:84.26:0,84,1077	1/1:0,16:16:48.13:677,48,0	1/1:0,16:16:48.16:719,48,0	1/1:1,66:67:99:2562,172,0	0/0:19,0:19:57.18:0,57,738	0/0:15,0:15:45.15:0,45,584	0/0:34,0:34:99:0,102,1322	0/0:18,0:18:54.17:0,54,697	0/0:24,0:24:66.21:0,66,856	1/1:3,27:30:75.25:1122,75,0	0/0:12,0:12:36.12:0,36,466
chr10	83740813	.	G	GA	15375.03	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=15.659;DP=724;FS=12.134;HRun=1;HaplotypeScore=97.4347;InbreedingCoeff=0.9957;MQ=79.66;MQ0=0;MQRankSum=0.304;QD=39.02;ReadPosRankSum=1.510;VQSLOD=4.1959;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.26:0,96,1212	1/1:2,8:10:20.98:314,21,0	0/0:12,0:12:12.64:0,13,317	0/0:24,0:24:63.07:0,63,704	0/0:14,0:14:42.08:0,42,506	0/0:17,0:17:48.14:0,48,608	1/1:0,25:25:60.20:899,60,0	1/1:2,33:35:99:1482,99,0	0/0:14,0:14:42.11:0,42,528	1/1:0,31:31:93.28:1334,93,0	1/1:1,12:13:33.11:494,33,0	0/0:25,0:25:75.24:0,75,973	0/0:29,0:29:81.22:0,81,1013	0/0:30,0:30:90.29:0,90,1166	1/1:0,31:31:87.29:1302,87,0	1/1:3,43:46:99:1618,108,0	1/1:0,37:37:99:1571,105,0	0/0:24,0:24:69.20:0,69,877	1/1:0,25:25:72.20:1035,72,0	1/1:2,22:24:57.19:837,57,0	1/1:3,53:56:99:2112,141,0	0/0:24,0:24:66.21:0,66,856	0/0:17,0:17:48.16:0,48,623	0/0:14,0:14:42.14:0,42,545	1/1:2,28:30:80.74:1212,81,0	0/0:29,0:28:84.26:0,84,1078	1/1:1,30:30:78.26:1163,78,0	0/0:25,0:25:72.23:0,72,934
chr10	83741673	.	A	AAG	1956.10	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-9.414;DP=608;FS=1.314;HRun=0;HaplotypeScore=81.3332;InbreedingCoeff=0.9951;MQ=82.32;MQ0=0;MQRankSum=-4.426;QD=46.57;ReadPosRankSum=1.482;VQSLOD=4.9288;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:42:99:2051,117,0	0/0:10,0:10:24.07:0,24,325	0/0:18,0:18:39.13:0,39,521	0/0:24,0:24:63.20:0,63,834	0/0:18,0:18:51.16:0,51,672	0/0:16,0:16:45.11:0,45,559	0/0:31,0:31:84.26:0,84,1118	0/0:24,0:24:66.22:0,66,887	0/0:23,0:23:63.20:0,63,837	0/0:19,0:19:57.19:0,57,771	0/0:10,0:10:30.10:0,30,406	0/0:22,0:22:66.22:0,66,891	0/0:26,0:26:75.24:0,75,998	0/0:20,0:20:54.18:0,54,729	0/0:26,0:26:72.23:0,72,958	0/0:26,0:26:75.24:0,75,999	0/0:31,0:31:81.27:0,81,1091	0/0:25,0:25:60.18:0,60,791	0/0:14,0:14:36.12:0,36,487	0/0:17,0:17:51.16:0,51,672	0/0:34,0:34:99:0,102,1363	0/0:12,0:12:36.12:0,36,487	0/0:20,0:20:57.19:0,57,769	0/0:25,0:25:69.23:0,69,934	0/0:18,0:18:48.16:0,48,644	0/0:27,0:27:75.24:0,75,1002	0/0:22,0:22:57.18:0,57,755	0/0:8,0:8:24.08:0,24,324
chr10	83743367	.	CCACACACACACACA	C	899.48	PASS	AB=0.717;AC=18;AF=0.529;AN=34;BaseQRankSum=4.354;DP=209;FS=25.735;HRun=0;HaplotypeScore=105.1476;InbreedingCoeff=0.4131;MQ=53.21;MQ0=16;MQRankSum=-4.411;QD=16.06;ReadPosRankSum=2.984;VQSLOD=0.3069;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:6,0:6:6.36:37,6,0	0/0:10,0:10:3.01:0,3,187	1/1:6,0:5:3.01:58,3,0	1/1:10,0:10:2.87:20,3,0	0/0:7,0:9:6.02:0,6,347	1/1:3,1:4:3.01:117,3,0	./.	0/0:8,0:7:15.05:0,15,759	0/1:1,0:3:12.20:12,0,45	0/1:4,0:5:11.09:27,0,11	1/1:3,2:4:6.02:234,6,0	1/1:3,2:5:6.02:234,6,0	./.	0/0:7,0:7:12.04:0,12,567	./.	./.	./.	1/1:4,0:6:3.01:58,3,0	0/0:5,0:5:6.02:0,6,386	./.	0/0:9,0:8:9.02:0,9,403	0/0:10,0:10:12.04:0,12,604	1/1:2,2:3:6.02:234,6,0	./.
chr10	83744679	.	G	GCT	5789.06	PASS	AB=1.000;AC=33;AF=0.611;AN=54;BaseQRankSum=0.822;DP=663;FS=16.649;HRun=0;HaplotypeScore=102.3965;InbreedingCoeff=0.8796;MQ=67.82;MQ0=12;MQRankSum=-2.683;QD=14.84;ReadPosRankSum=-1.631;VQSLOD=2.9555;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:37:82.67:636,83,0	1/1:4,0:4:11.93:93,12,0	0/0:33,0:24:62.13:0,62,631	0/0:33,0:27:55.89:0,56,626	1/1:17,0:15:29.95:271,30,0	0/0:18,0:18:16.71:0,17,247	1/1:34,0:33:62.22:546,62,0	1/1:25,0:25:65.87:568,66,0	0/0:28,0:27:68.76:0,69,568	1/1:4,18:23:53.41:465,53,0	1/1:3,8:12:2.81:53,3,0	0/0:36,0:36:89.81:0,90,801	1/1:16,0:15:23.91:191,24,0	1/1:27,0:25:44.89:366,45,0	1/1:20,0:20:38.87:339,39,0	1/1:28,0:28:22.90:336,23,0	1/1:31,0:29:68.63:507,69,0	0/0:24,0:24:62.31:0,62,509	1/1:18,0:18:47.53:402,48,0	./.	1/1:29,0:28:48.51:375,49,0	1/1:16,0:14:23.90:198,24,0	0/1:13,0:13:15.52:16,0,131	0/0:43,0:43:99:0,126,1102	0/0:16,0:16:15.31:0,15,230	0/0:27,0:26:54.87:0,55,624	1/1:29,0:26:52.81:429,53,0	0/0:3,0:3:8.99:0,9,88
chr10	83744680	.	C	CTG	1106.53	PASS	AB=0.840;AC=34;AF=0.680;AN=50;BaseQRankSum=4.597;DP=759;FS=1.175;HRun=0;HaplotypeScore=178.0827;InbreedingCoeff=0.5140;MQ=63.01;MQ0=12;MQRankSum=-3.449;QD=2.30;ReadPosRankSum=-2.767;VQSLOD=2.2224;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:38:11.52:0,12,65	./.	./.	./.	1/1:21,0:18:3.01:30,3,0	1/1:12,9:21:3.01:44,3,0	1/1:34,0:33:9.91:71,10,0	1/1:31,0:31:11.21:68,11,0	0/0:27,0:26:3.01:0,3,32	1/1:35,0:34:37.44:319,37,0	1/1:12,0:12:2.80:30,3,0	0/0:38,0:39:11.27:0,11,137	1/1:22,0:21:10.70:75,11,0	1/1:34,0:32:6.48:55,6,0	1/1:30,0:29:8.96:69,9,0	1/1:39,0:37:5.93:45,6,0	1/1:36,0:32:3.54:34,4,0	0/0:24,0:24:6.01:0,6,64	1/1:23,0:22:23.83:177,24,0	0/1:18,0:18:0:0,0,0	1/1:36,0:33:5.68:54,6,0	1/1:20,0:17:2.99:23,3,0	0/1:9,7:17:15.07:79,0,15	0/0:41,0:43:17.98:0,18,212	1/1:13,2:20:3:26,3,0	0/0:27,0:27:5.85:0,6,46	1/1:32,0:28:9.63:64,10,0	0/0:3,0:3:3.01:0,3,32
chr10	83744718	.	G	GTA	2734.30	PASS	AB=0.953;AC=20;AF=0.357;AN=56;BaseQRankSum=-1.996;DP=689;FS=6.809;HRun=0;HaplotypeScore=122.0166;InbreedingCoeff=0.0632;MQ=54.33;MQ0=19;MQRankSum=0.291;QD=7.16;ReadPosRankSum=2.979;VQSLOD=2.7296;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:99:0,101,818	0/1:9,0:7:29.79:32,0,30	0/0:20,0:11:19.32:0,19,242	0/0:21,0:10:29.99:0,30,282	0/1:14,0:12:7.14:75,0,7	0/0:19,0:19:10.71:0,11,195	0/1:18,20:38:44.60:45,0,60	0/1:36,0:35:99:386,0,116	0/0:23,0:22:47.16:0,47,395	0/1:26,0:26:46.39:323,0,46	1/1:11,0:11:17.96:145,18,0	0/0:32,0:32:77.77:0,78,698	1/1:16,0:15:14.86:108,15,0	0/1:21,0:19:20.41:111,0,20	0/1:34,0:33:26.54:268,0,27	0/1:37,1:36:33.96:208,0,34	0/1:22,1:19:71.92:87,0,72	0/0:27,0:27:70.79:0,71,593	0/1:22,1:22:14.42:346,0,14	1/1:21,0:21:29.64:248,30,0	0/1:28,2:26:10.81:232,0,11	1/1:17,1:15:20.96:192,21,0	0/0:23,0:23:3.77:0,4,264	0/0:46,0:46:99:0,128,1136	0/0:20,0:19:25.43:0,25,208	0/0:22,0:21:56.89:0,57,496	0/1:22,0:21:57.52:109,0,58	0/0:4,0:4:11.98:0,12,116
chr10	83746561	.	A	AGG	2909.58	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.652;DP=753;FS=11.591;HRun=7;HaplotypeScore=90.2257;InbreedingCoeff=0.9999;MQ=86.66;MQ0=1;MQRankSum=-2.449;QD=35.06;ReadPosRankSum=0.791;VQSLOD=2.4175;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,1397	0/0:14,0:14:39.11:0,39,454	0/0:23,0:23:50.44:0,50,599	0/0:29,0:28:69.07:0,69,751	0/0:21,0:21:60.18:0,60,698	0/0:23,0:23:66.14:0,66,742	0/0:32,0:32:90.19:0,90,1010	0/0:28,0:28:53.94:0,54,619	0/0:34,0:34:84.23:0,84,979	0/0:31,0:31:78.22:0,78,909	0/0:17,0:17:48.13:0,48,549	0/0:35,0:35:96.26:0,96,1108	0/0:29,0:29:81.20:0,81,919	0/0:33,0:33:90.21:0,90,1024	0/0:33,0:34:80.94:0,81,995	0/0:27,0:27:72.19:0,72,829	0/0:27,0:27:72.21:0,72,839	1/1:3,11:16:35.09:510,35,0	0/0:27,0:27:72.19:0,72,830	0/0:15,0:15:36.03:0,36,419	0/0:60,0:60:99:0,165,1876	0/0:17,0:17:42.11:0,42,489	0/0:25,0:25:57.12:0,57,652	0/0:22,0:22:63.17:0,63,724	1/1:2,19:21:50.66:796,51,0	1/1:5,23:28:66.23:1075,66,0	0/0:22,0:22:63.15:0,63,720	1/1:1,16:17:42.14:689,42,0
chr10	83746930	.	CTTAA	C	3711.24	PASS	AB=0.523;AC=7;AF=0.125;AN=56;BaseQRankSum=12.017;DP=697;FS=0.995;HRun=0;HaplotypeScore=120.1043;InbreedingCoeff=0.8409;MQ=88.93;MQ0=0;MQRankSum=-4.310;QD=48.83;ReadPosRankSum=2.681;VQSLOD=4.1671;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,3681	0/0:9,0:9:27.09:0,27,699	0/0:33,0:33:86.46:0,86,1966	0/0:18,0:18:43.86:0,44,862	0/0:26,0:26:69.24:0,69,1890	0/0:25,0:23:75.26:0,75,2054	0/0:31,0:31:90.31:0,90,2454	0/0:37,0:37:99:0,99,2701	0/0:26,0:26:78.25:0,78,2070	0/0:26,0:26:72.24:0,72,1881	0/0:22,0:22:63.22:0,63,1726	0/0:32,0:32:96.33:0,96,2599	0/0:26,0:26:75.26:0,75,2023	0/0:22,0:22:60.21:0,60,1638	0/0:35,0:35:99:0,102,2786	0/0:26,0:26:78.27:0,78,2137	0/0:25,0:25:72.25:0,72,1936	1/1:0,21:21:51.17:988,51,0	0/0:16,0:16:48.16:0,48,1307	0/0:23,0:23:69.22:0,69,1832	0/0:29,0:29:87.30:0,87,2377	0/0:22,0:22:60.21:0,60,1644	0/0:20,0:20:57.17:0,57,1432	0/0:19,0:19:57.20:0,57,1562	1/1:2,17:19:42.14:814,42,0	0/1:2,21:22:16:1153,0,16	0/0:28,0:28:84.29:0,84,2300	1/1:0,13:13:39.13:755,39,0
chr10	83747092	.	GC	G	1439.92	PASS	AB=0.586;AC=7;AF=0.125;AN=56;BaseQRankSum=11.455;DP=589;FS=0.000;HRun=3;HaplotypeScore=72.6445;InbreedingCoeff=0.9090;MQ=88.82;MQ0=0;MQRankSum=-3.504;QD=26.67;ReadPosRankSum=3.801;VQSLOD=2.6726;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1430	0/0:8,0:8:21.07:0,21,302	0/0:24,0:24:66.21:0,66,931	0/0:19,0:19:57.19:0,57,815	0/0:16,0:16:48.16:0,48,690	0/0:23,0:23:69.23:0,69,993	0/0:23,0:23:66.22:0,66,949	0/0:35,0:35:99:0,102,1469	0/0:23,0:23:66.22:0,66,947	0/0:23,0:23:66.20:0,66,915	0/0:13,0:13:36.09:0,36,481	0/0:28,0:28:84.28:0,84,1209	0/0:26,0:26:72.23:0,72,1019	0/0:19,0:19:54.18:0,54,776	0/0:24,0:24:72.24:0,72,1036	0/0:21,0:21:63.21:0,63,906	0/0:34,0:34:99:0,102,1446	1/1:0,18:18:54.15:612,54,0	0/0:18,0:18:51.16:0,51,717	0/0:10,0:10:30.10:0,30,430	0/0:32,0:32:96.32:0,96,1381	0/0:16,0:16:48.14:0,48,672	0/0:24,0:24:63.20:0,63,890	0/0:12,0:12:36.12:0,36,518	1/1:2,6:8:18.05:204,18,0	0/1:5,12:17:1.07:398,0,1	0/0:27,0:26:81.27:0,81,1161	1/1:0,11:11:33.09:374,33,0
chr10	83747162	.	GT	G	1337.16	PASS	AB=0.532;AC=7;AF=0.125;AN=56;BaseQRankSum=11.185;DP=591;FS=5.983;HRun=7;HaplotypeScore=69.6070;InbreedingCoeff=0.8507;MQ=64.48;MQ0=1;MQRankSum=-5.094;QD=20.89;ReadPosRankSum=2.203;VQSLOD=3.4076;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:60.19:0,60,749	0/0:7,0:7:15.05:0,15,189	0/0:27,0:23:48.26:0,48,671	0/0:26,0:22:34.35:0,34,600	0/0:18,0:18:51.16:0,51,640	0/0:21,0:21:60.19:0,60,754	0/0:12,0:12:36.12:0,36,452	0/0:35,0:35:90.26:0,90,1099	0/0:23,0:23:66.21:0,66,829	0/0:28,0:28:75.23:0,75,929	0/0:10,0:10:30.08:0,30,362	0/0:21,0:21:63.20:0,63,790	0/0:25,0:25:72.21:0,72,882	0/0:22,1:23:35.60:0,36,761	0/0:33,0:33:81.26:0,81,1019	0/0:29,0:29:84.27:0,84,1057	0/0:30,0:30:78.25:0,78,981	1/1:7,16:23:54.10:537,54,0	0/0:8,0:7:15.05:0,15,189	0/0:19,0:18:57.18:0,57,717	0/0:24,0:24:69.17:0,69,837	0/0:12,0:12:36.11:0,36,451	0/0:18,0:18:51.16:0,51,642	0/0:26,0:26:78.25:0,78,981	1/1:0,9:9:27.05:268,27,0	0/1:3,22:24:6.35:559,0,6	0/0:22,0:22:66.19:0,66,811	1/1:2,5:7:12.02:119,12,0
chr10	83747171	.	ATGT	A	1588.10	PASS	AB=0.650;AC=7;AF=0.125;AN=56;BaseQRankSum=9.718;DP=615;FS=3.543;HRun=0;HaplotypeScore=94.1463;InbreedingCoeff=0.7896;MQ=62.37;MQ0=2;MQRankSum=-0.839;QD=25.21;ReadPosRankSum=1.620;VQSLOD=3.8094;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:34:45.06:0,45,521	0/0:5,0:5:12.04:0,12,244	0/0:30,0:23:10.49:0,10,420	0/0:29,0:25:29.46:0,29,586	0/0:17,0:17:36.12:0,36,730	0/0:22,0:22:54.17:0,54,1036	0/0:14,0:14:33.09:0,33,618	0/0:33,0:33:75.25:0,75,1369	0/0:26,0:26:78.27:0,78,1568	0/0:26,0:26:54.13:0,54,1045	0/0:13,0:13:36.12:0,36,682	0/0:23,0:23:51.17:0,51,1000	0/0:25,1:26:14.22:0,14,1054	0/0:21,0:21:51.16:0,51,991	0/0:28,0:28:72.25:0,72,1463	0/0:31,0:31:81.26:0,81,1573	0/0:29,0:29:69.19:0,69,1326	1/1:8,15:23:57.15:764,57,0	0/0:11,0:10:21.06:0,21,366	0/0:22,0:21:12.02:0,12,900	0/0:27,0:26:66.17:0,66,1185	0/0:14,0:14:30.09:0,30,575	0/0:18,0:18:42.14:0,42,849	0/0:29,0:29:75.26:0,75,1519	1/1:2,7:9:21.07:290,21,0	0/1:12,14:25:12.83:552,0,13	0/0:23,0:23:54.18:0,54,1049	1/1:3,2:5:9.03:125,9,0
chr10	83747387	.	A	ATT	1145.81	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-4.467;DP=213;FS=38.214;HRun=10;HaplotypeScore=33.1049;InbreedingCoeff=0.7653;MQ=93.24;MQ0=3;MQRankSum=0.674;QD=19.10;ReadPosRankSum=0.923;VQSLOD=-0.2932;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:15.03:0,15,153	1/1:2,3:5:6.02:89,6,0	0/0:26,0:23:22.36:0,22,290	0/0:15,0:7:12.71:0,13,89	0/0:7,0:7:12.01:0,12,122	0/0:7,0:7:21.05:0,21,214	1/1:5,3:8:14.97:177,15,0	0/0:5,0:5:12.01:0,12,117	0/0:6,0:6:18.04:0,18,181	1/1:1,5:6:15.04:204,15,0	1/1:0,3:3:9.03:134,9,0	0/0:7,0:7:8.96:0,9,91	0/0:3,0:3:5.98:0,6,54	0/1:4,0:4:0:0,0,0	1/1:4,9:13:21.07:313,21,0	1/1:4,4:8:7.58:93,8,0	1/1:5,8:13:21.07:313,21,0	0/0:8,0:8:11.96:0,12,112	0/0:6,0:6:5.99:0,6,61	0/0:8,0:8:17.39:0,17,160	0/0:10,0:10:17.99:0,18,183	0/0:2,0:3:5.88:0,6,45	0/0:3,0:3:6:0,6,61	0/0:7,0:7:8.99:0,9,92	0/0:4,0:4:11.89:0,12,96	0/0:8,0:8:6:0,6,61	0/0:7,0:7:8.99:0,9,90	0/0:5,0:5:9.02:0,9,91
chr10	83748413	.	GA	G	2118.64	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.150;DP=605;FS=19.210;HRun=2;HaplotypeScore=56.9276;InbreedingCoeff=0.9982;MQ=85.55;MQ0=0;MQRankSum=-3.697;QD=30.70;ReadPosRankSum=0.950;VQSLOD=1.8707;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1687	0/0:8,0:8:24.08:0,24,359	0/0:19,0:19:54.17:0,54,786	0/0:19,0:19:53.72:0,54,714	0/0:15,0:15:45.15:0,45,675	0/0:17,0:17:51.17:0,51,762	0/0:23,0:23:69.23:0,69,1034	0/0:33,0:33:99:0,99,1484	0/0:31,0:31:93.32:0,93,1394	0/0:23,0:23:69.23:0,69,1033	0/0:11,0:11:33.10:0,33,475	0/0:17,0:17:51.16:0,51,744	0/0:15,0:15:45.12:0,45,648	0/0:21,0:21:60.20:0,60,899	0/0:31,0:31:87.29:0,87,1304	0/0:29,0:29:84.27:0,84,1237	0/0:26,0:26:78.24:0,78,1146	1/1:0,24:24:63.20:818,63,0	0/0:19,0:19:57.19:0,57,854	0/0:9,0:9:27.08:0,27,384	0/0:34,0:34:99:0,102,1484	0/0:17,0:17:51.17:0,51,765	0/0:19,0:19:57.18:0,57,834	0/0:33,0:33:96.26:0,96,1370	1/1:0,12:12:27.09:350,27,0	1/1:0,21:21:63.17:799,63,0	0/0:27,0:27:81.27:0,81,1214	1/1:0,12:12:24.08:312,24,0
chr10	83748535	.	T	TA	2965.45	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=8.143;DP=397;FS=17.406;HRun=4;HaplotypeScore=41.6243;InbreedingCoeff=0.8724;MQ=80.48;MQ0=0;MQRankSum=-2.292;QD=31.22;ReadPosRankSum=2.439;VQSLOD=1.8307;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.12:0,54,599	0/0:9,0:9:27.08:0,27,306	0/1:14,0:14:6.42:6,0,288	0/0:8,0:8:15.10:0,15,199	0/0:19,0:19:54.15:0,54,613	0/0:15,0:15:45.10:0,45,498	0/0:14,0:14:33.09:0,33,374	0/0:28,0:28:72.21:0,72,817	0/0:16,0:16:48.12:0,48,535	0/0:16,0:16:48.14:0,48,544	0/0:11,0:11:33.08:0,33,365	0/0:6,0:6:15.04:0,15,170	0/0:9,0:9:21.06:0,21,238	0/0:8,0:8:21.06:0,21,238	0/0:10,0:10:30.09:0,30,340	0/0:11,0:11:24.07:0,24,272	0/0:24,0:24:72.21:0,72,817	1/1:3,22:25:69.22:928,69,0	0/0:12,0:12:36.10:0,36,408	0/0:10,0:10:27.08:0,27,306	0/0:12,0:12:36.10:0,36,408	0/0:4,0:4:12.03:0,12,136	0/0:15,0:15:42.10:0,42,465	0/0:11,0:11:33.09:0,33,374	1/1:0,19:19:57.06:717,57,0	1/1:1,15:16:45.15:616,45,0	0/0:13,0:13:39.11:0,39,442	1/1:0,21:21:63.21:862,63,0
chr10	83748611	.	AAT	A	1386.20	PASS	AB=1.000;AC=10;AF=0.217;AN=46;BaseQRankSum=7.459;DP=203;FS=7.008;HRun=0;HaplotypeScore=39.0980;InbreedingCoeff=0.5499;MQ=83.75;MQ0=0;MQRankSum=-2.081;QD=19.25;ReadPosRankSum=3.140;VQSLOD=2.6195;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:18.06:0,18,313	0/0:5,0:5:12.04:0,12,213	0/1:9,0:8:8.36:8,0,53	0/1:14,0:9:17.99:18,0,51	./.	0/0:9,0:9:21.07:0,21,373	./.	0/0:32,0:32:96.33:0,96,1681	0/0:4,0:4:12.04:0,12,213	0/0:9,0:9:24.08:0,24,426	0/0:4,0:4:12.04:0,12,187	0/0:2,0:2:3.01:0,3,53	0/0:3,0:3:6.02:0,6,106	0/0:2,0:2:3.01:0,3,53	0/0:3,0:3:9.03:0,9,160	0/0:1,0:1:3.01:0,3,53	0/0:26,0:26:66.20:0,66,1109	1/1:4,18:22:51.17:700,51,0	0/0:10,0:10:24.07:0,24,379	./.	0/0:2,0:2:3.01:0,3,53	./.	0/0:3,0:3:9.03:0,9,147	./.	1/1:2,4:6:15.04:192,15,0	1/1:2,4:6:12.04:165,12,0	0/0:7,0:7:15.05:0,15,247	1/1:4,11:15:33.11:453,33,0
chr10	83748771	.	CCT	C	631.94	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=1.401;DP=440;FS=6.644;HRun=0;HaplotypeScore=68.4039;InbreedingCoeff=0.7379;MQ=75.09;MQ0=9;MQRankSum=5.310;QD=5.54;ReadPosRankSum=-1.550;VQSLOD=1.6550;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:44.51:0,45,501	1/1:1,4:5:3.01:37,3,0	0/0:25,0:14:19.48:0,19,218	0/0:35,0:20:24.94:0,25,315	0/0:12,0:12:27.09:0,27,399	0/0:17,0:17:36.09:0,36,477	1/1:13,0:13:17.95:183,18,0	0/0:34,0:34:65.75:0,66,907	0/0:6,0:6:15.05:0,15,241	1/1:2,12:14:33.09:391,33,0	1/1:3,4:7:5.80:40,6,0	0/0:12,0:12:28.33:0,28,418	0/0:14,0:14:27.08:0,27,402	0/0:14,0:12:30.01:0,30,426	1/1:3,9:12:3.01:37,3,0	1/1:4,6:10:6.02:72,6,0	1/1:2,24:26:3.01:37,3,0	0/0:16,0:16:20.96:0,21,277	0/0:10,0:10:30.07:0,30,381	0/0:12,0:12:21.05:0,21,274	0/0:30,0:30:66.69:0,67,801	0/0:18,0:18:42.13:0,42,634	0/0:10,0:9:24.05:0,24,332	0/0:11,0:10:24.07:0,24,356	0/0:13,0:13:20.50:0,20,330	0/1:14,0:13:0.71:1,0,145	0/1:13,0:13:3.36:3,0,391	0/0:13,0:13:27:0,27,306
chr10	83748815	.	TCTCTCACA	T	1274.19	PASS	AB=0.918;AC=12;AF=0.222;AN=54;BaseQRankSum=2.833;DP=482;FS=7.958;HRun=0;HaplotypeScore=130.0067;InbreedingCoeff=-0.0681;MQ=49.07;MQ0=17;MQRankSum=-0.136;QD=6.01;ReadPosRankSum=-0.961;VQSLOD=1.1984;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:31.81:106,0,32	0/0:7,0:7:14.23:0,14,187	./.	0/0:24,0:2:6:0,6,85	0/0:11,0:11:24.08:0,24,540	0/0:17,0:17:26.34:0,26,577	0/0:24,0:21:41.17:0,41,695	0/1:32,0:30:48.55:49,0,493	0/0:18,0:18:45.14:0,45,1068	0/0:13,0:13:13.13:0,13,515	0/0:8,0:8:7.27:0,7,121	0/1:17,0:17:0.14:0,0,1048	0/0:11,0:11:25.42:0,25,414	0/0:19,0:18:40.79:0,41,879	0/0:17,0:17:29.75:0,30,684	0/0:18,0:18:30.05:0,30,614	0/0:35,0:34:50.24:0,50,1032	0/1:24,0:24:41.21:214,0,41	0/0:12,0:11:11.90:0,12,484	0/0:8,0:7:5.46:0,5,75	0/1:29,0:29:29.60:30,0,1010	0/1:15,0:15:21.17:21,0,358	0/0:13,0:13:30.06:0,30,546	0/1:17,0:16:6.94:7,0,783	0/1:4,5:9:61.75:75,0,62	0/1:2,13:14:14.66:348,0,15	0/1:13,0:11:18.72:19,0,512	1/1:12,0:12:33.11:553,33,0
chr10	83748817	.	TCTCACACA	T	977.22	PASS	AB=0.953;AC=12;AF=0.222;AN=54;BaseQRankSum=4.230;DP=479;FS=8.118;HRun=0;HaplotypeScore=131.1147;InbreedingCoeff=-0.0150;MQ=49.38;MQ0=14;MQRankSum=-0.983;QD=5.06;ReadPosRankSum=-2.328;VQSLOD=1.5459;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:32.31:32,0,34	0/0:7,0:7:11.53:0,12,227	./.	0/0:27,0:3:6.91:0,7,139	0/0:11,0:11:24.07:0,24,605	0/0:16,0:16:11.27:0,11,801	0/0:25,0:22:47.46:0,47,972	0/1:31,0:29:92.23:92,0,879	0/0:19,0:19:45.11:0,45,1213	0/1:13,0:13:6.95:7,0,474	0/0:7,0:7:9.02:0,9,195	0/0:17,0:17:23.91:0,24,1103	0/0:12,0:12:24.51:0,25,501	0/0:21,0:19:26.16:0,26,1053	0/0:18,0:18:33.08:0,33,972	0/0:18,0:18:26.92:0,27,775	0/0:35,0:34:53.75:0,54,1397	0/1:2,19:21:5.38:303,0,5	0/0:11,0:11:2.17:0,2,555	0/1:8,0:7:32.40:32,0,41	0/1:30,0:29:81.44:81,0,1203	0/1:13,0:13:5.37:5,0,332	0/0:13,0:13:8.58:0,9,671	0/0:17,0:16:17.59:0,18,964	0/1:9,0:9:4.40:64,0,4	0/1:15,0:15:71.11:164,0,71	0/1:13,0:12:13.60:14,0,717	1/1:13,0:13:35.75:332,36,0
chr10	83748819	.	T	TCACACACACACA	727.27	PASS	AB=0.929;AC=7;AF=0.135;AN=52;BaseQRankSum=2.194;DP=503;FS=4.909;HRun=0;HaplotypeScore=174.4510;InbreedingCoeff=0.4125;MQ=48.88;MQ0=16;MQRankSum=-3.256;QD=5.55;ReadPosRankSum=-2.684;VQSLOD=2.1542;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,5:33:0.18:0,0,0	0/0:7,0:7:7.20:0,7,95	./.	0/0:27,0:3:1.74:0,2,9	0/0:11,0:11:12:0,12,379	0/0:16,0:16:33.10:0,33,955	0/0:25,0:22:38.85:0,39,1072	1/1:35,0:33:26.07:317,26,0	0/0:18,0:18:33.11:0,33,1034	0/0:12,0:12:6.02:0,6,149	0/0:7,0:7:9.03:0,9,274	0/0:17,0:17:21.07:0,21,648	0/0:11,0:11:8.99:0,9,174	0/0:23,0:21:30.10:0,30,918	0/0:18,0:18:33.10:0,33,925	0/0:18,0:18:24.08:0,24,809	0/0:34,0:33:1.03:0,1,1516	0/0:21,0:22:14.26:0,14,345	1/1:13,0:14:11.50:83,11,0	./.	0/1:35,0:34:99:233,0,125	0/0:13,0:13:9.02:0,9,233	0/0:13,0:13:21.07:0,21,670	0/0:18,0:17:27.09:0,27,860	0/0:9,0:9:3.01:0,3,60	0/0:15,0:15:16.60:0,17,371	0/1:14,0:13:40.37:222,0,40	0/0:13,0:13:21.06:0,21,544
chr10	83752704	.	A	AGATAAACATTCTTC	10201.24	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-3.580;DP=681;FS=3.913;HRun=0;HaplotypeScore=245.4382;InbreedingCoeff=0.9954;MQ=86.81;MQ0=0;MQRankSum=-11.494;QD=156.94;ReadPosRankSum=-0.305;VQSLOD=4.8893;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,5217	0/0:11,0:11:33.11:0,33,1375	0/0:28,0:28:81.25:0,81,2838	0/0:19,0:19:57.18:0,57,1880	0/0:26,0:26:75.24:0,75,3113	0/0:26,0:25:72.25:0,72,3187	0/0:19,0:19:57.20:0,57,2474	0/0:34,0:34:99:0,99,3681	0/0:33,0:33:99:0,99,4188	0/0:26,0:26:72.23:0,72,2514	0/0:13,0:13:36.11:0,36,1392	0/0:25,0:25:75.23:0,75,2882	0/0:17,0:17:51.18:0,51,2247	0/0:24,0:24:69.24:0,69,2898	0/0:33,0:33:99:0,99,4214	0/0:38,0:38:99:0,114,4859	0/0:34,0:33:99:0,102,4111	1/1:2,4:6:15.05:988,15,0	0/0:20,0:20:57.20:0,57,2204	0/0:20,0:20:60.21:0,60,2595	0/0:29,0:29:87.30:0,87,3451	0/0:26,0:26:78.25:0,78,3259	0/0:19,0:19:57.18:0,57,2297	0/0:20,0:20:57.18:0,57,2414	1/1:11,6:20:48.16:2712,48,0	1/1:7,15:24:69.24:4354,69,0	0/0:30,0:30:87.25:0,87,3316	1/1:6,6:15:36.12:2148,36,0
chr10	83755587	.	T	TC	1198.77	PASS	AB=0.667;AC=9;AF=0.167;AN=54;BaseQRankSum=-4.991;DP=325;FS=7.619;HRun=8;HaplotypeScore=34.4497;InbreedingCoeff=0.7384;MQ=78.65;MQ0=0;MQRankSum=0.365;QD=15.77;ReadPosRankSum=-2.059;VQSLOD=2.1792;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:57.01:0,57,521	0/0:1,0:1:2.99:0,3,23	0/0:7,0:7:5.99:0,6,55	0/0:8,0:8:9.38:0,9,82	0/0:3,0:3:2.99:0,3,27	0/0:9,0:9:27.01:0,27,247	0/0:17,0:17:39:0,39,352	1/1:6,8:14:20.84:237,21,0	0/0:9,0:9:24.01:0,24,218	0/0:16,0:16:42.02:0,42,382	0/0:8,0:8:17.99:0,18,160	0/0:18,0:18:45.01:0,45,411	0/0:13,0:13:33.01:0,33,301	0/0:10,0:10:30.02:0,30,274	0/0:8,0:8:15:0,15,137	0/0:8,0:8:18:0,18,165	0/0:21,0:21:47.99:0,48,439	0/0:22,0:22:54.01:0,54,494	1/1:0,6:6:15.01:159,15,0	0/1:5,5:10:9.47:130,0,9	1/1:5,27:32:54.16:623,54,0	0/0:9,0:9:21:0,21,192	0/0:6,0:6:8.97:0,9,78	0/0:19,0:19:27.63:0,28,318	0/0:6,0:6:15:0,15,137	0/0:6,0:6:14.99:0,15,134	1/1:1,13:14:18.05:208,18,0	./.
chr10	83756563	.	G	GCTGA	3564.32	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-8.291;DP=735;FS=8.695;HRun=0;HaplotypeScore=133.6713;InbreedingCoeff=0.9745;MQ=67.32;MQ0=6;MQRankSum=-2.207;QD=23.45;ReadPosRankSum=0.698;VQSLOD=2.8603;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:69.23:0,69,1089	0/0:12,0:12:27.07:0,27,399	0/0:31,0:20:42.06:0,42,585	0/0:40,0:33:27.63:0,28,670	0/0:19,0:19:21.07:0,21,332	0/0:20,0:20:51.17:0,51,830	0/0:31,0:31:75.24:0,75,1186	1/1:35,0:35:60.11:902,60,0	0/0:25,0:25:47.11:0,47,679	0/0:15,0:14:15.05:0,15,246	0/0:16,0:16:18.06:0,18,293	0/0:35,0:35:87.26:0,87,1358	0/0:26,0:26:57.17:0,57,909	0/0:20,0:20:45.15:0,45,739	0/0:31,0:31:66.20:0,66,1028	0/0:31,0:31:69.21:0,69,1079	0/0:27,0:27:75.23:0,75,1198	0/0:11,0:11:29.77:0,30,436	1/1:12,3:14:9.03:219,9,0	1/1:8,8:17:15.05:330,15,0	1/1:22,23:46:45.15:1099,45,0	0/0:18,0:18:23.29:0,23,345	0/0:21,0:21:24.55:0,25,386	0/0:46,0:46:99:0,108,1746	0/0:23,0:22:39.13:0,39,607	0/0:27,0:26:48.16:0,48,760	1/1:9,27:38:41.20:1014,41,0	0/0:26,0:26:66.22:0,66,1056
chr10	83759694	.	G	GGCACCCTGCACCCT	6592.16	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-1.205;DP=374;FS=14.430;HRun=0;HaplotypeScore=139.8690;InbreedingCoeff=0.8900;MQ=69.75;MQ0=0;MQRankSum=-9.022;QD=111.73;ReadPosRankSum=0.310;VQSLOD=4.1147;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:72.25:0,72,2762	0/0:5,0:5:11.97:0,12,284	0/0:5,0:5:6.02:0,6,196	0/0:6,0:6:11.99:0,12,143	0/0:10,0:10:18.04:0,18,551	0/0:14,0:14:36.12:0,36,1307	0/0:22,0:22:54.15:0,54,1832	0/0:17,0:17:24.08:0,24,736	0/0:8,0:8:15.05:0,15,504	0/0:12,0:11:30.09:0,30,954	0/0:6,0:6:18.06:0,18,615	0/0:12,0:12:33.09:0,33,1139	0/0:10,0:10:15.05:0,15,605	0/0:12,0:12:33.09:0,33,1135	0/0:9,0:9:21.06:0,21,752	0/0:2,0:2:6.02:0,6,197	0/0:21,0:21:57.18:0,57,2092	1/1:18,5:27:42.14:2410,42,0	0/0:26,0:26:54.14:0,54,1732	0/0:6,0:6:12.04:0,12,472	0/0:29,0:29:81.28:0,81,2915	0/0:14,0:14:42.12:0,42,1285	0/0:5,0:5:12.04:0,12,484	0/0:21,0:21:57.20:0,57,2300	1/1:7,3:11:23.15:1462,23,0	1/1:5,8:15:36.12:2219,36,0	0/0:11,0:11:33.11:0,33,1261	1/1:6,0:6:12.04:501,12,0
chr10	83760213	.	C	CG	2780.77	PASS	AB=0.944;AC=15;AF=0.268;AN=56;BaseQRankSum=-10.571;DP=532;FS=3.988;HRun=7;HaplotypeScore=60.4573;InbreedingCoeff=0.8986;MQ=83.77;MQ0=0;MQRankSum=-2.532;QD=22.79;ReadPosRankSum=-1.251;VQSLOD=3.2900;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:66.09:0,66,632	1/1:0,3:3:8.96:90,9,0	0/0:12,0:12:30.04:0,30,290	0/0:19,0:19:47.99:0,48,435	0/0:14,0:14:30.01:0,30,279	0/0:9,0:9:24.04:0,24,232	1/1:4,24:28:63.19:761,63,0	0/0:24,0:24:51.06:0,51,492	0/0:20,0:20:60.08:0,60,573	1/1:2,10:12:30.09:362,30,0	1/1:1,7:8:15.05:181,15,0	0/0:28,0:28:72.11:0,72,695	0/0:17,0:17:48.04:0,48,451	0/0:21,0:21:48.06:0,48,463	1/1:1,15:16:42.13:507,42,0	1/1:0,7:8:23.94:268,24,0	1/1:1,29:30:66.20:797,66,0	0/0:32,0:32:96.15:0,96,927	0/0:17,0:17:15.26:0,15,322	0/0:14,0:14:26.10:0,26,305	0/0:55,0:55:99:0,150,1438	0/0:12,0:12:21.03:0,21,202	0/0:10,0:10:21.02:0,21,203	0/0:36,0:36:96.12:0,96,917	0/0:16,0:16:27:0,27,253	0/1:16,1:17:9.22:9,0,198	0/0:16,0:16:45.07:0,45,434	0/0:8,0:8:21.03:0,21,202
chr10	83760799	.	T	TCACA	1128.84	PASS	AB=0.948;AC=16;AF=0.320;AN=50;BaseQRankSum=-2.557;DP=592;FS=8.378;HRun=0;HaplotypeScore=130.8753;InbreedingCoeff=0.5340;MQ=62.15;MQ0=5;MQRankSum=-0.954;QD=5.23;ReadPosRankSum=0.965;VQSLOD=2.0595;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:0:0,0,0	1/1:11,0:11:9.01:107,9,0	./.	./.	0/0:19,0:22:11.96:0,12,101	0/1:29,0:29:10.84:11,0,175	1/1:17,2:27:20.27:318,20,0	0/0:24,0:24:2.60:0,3,10	0/0:19,0:20:12.02:0,12,163	1/1:13,4:17:16.73:209,17,0	0/1:14,5:19:0:0,0,0	0/0:13,0:13:18.05:0,18,257	0/0:14,0:14:15.05:0,15,231	0/0:19,0:19:6.04:0,6,243	1/1:6,7:18:9.01:211,9,0	1/1:10,5:18:9.23:118,9,0	1/1:17,12:30:14.53:262,15,0	0/0:18,0:28:19.71:0,20,174	./.	0/0:16,0:23:15.02:0,15,140	0/0:17,0:16:0.89:0,1,2	0/1:22,0:23:10.93:11,0,108	0/0:20,0:21:12.02:0,12,163	0/0:44,0:45:38.43:0,38,706	0/0:11,0:16:12.01:0,12,111	0/1:21,0:23:25.94:45,0,26	0/0:17,0:28:29.04:0,29,258	0/0:3,0:4:2.84:0,3,14
chr10	83761385	.	AAACC	A	2192.53	PASS	AB=1.000;AC=18;AF=0.409;AN=44;BaseQRankSum=5.284;DP=531;FS=14.662;HRun=0;HaplotypeScore=155.4456;InbreedingCoeff=0.0013;MQ=47.38;MQ0=21;MQRankSum=-4.029;QD=7.94;ReadPosRankSum=1.226;VQSLOD=1.9042;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:14,0:14:64.90:65,0,96	0/0:75,0:16:6.21:0,6,375	0/0:64,0:10:20.50:0,21,198	0/0:31,0:30:3.67:0,4,558	0/0:21,0:21:19:0,19,432	0/1:23,0:22:99:130,0,150	./.	0/0:14,0:14:9.98:0,10,302	0/1:30,0:30:99:102,0,286	0/1:24,0:24:72.19:72,0,155	0/0:24,0:24:58.68:0,59,569	0/0:11,0:11:27.27:0,27,324	0/1:17,0:15:24.34:24,0,281	0/1:27,0:27:20.85:150,0,21	0/1:30,0:30:43.83:55,0,44	0/1:21,0:19:40.86:122,0,41	1/1:8,1:7:17.78:226,18,0	./.	./.	./.	0/1:12,0:12:9.66:10,0,162	0/0:13,0:13:8.87:0,9,308	0/1:22,0:20:7.07:7,0,283	1/1:9,8:16:33.09:491,33,0	1/1:26,0:25:63.13:801,63,0	./.	1/1:4,0:3:6.02:91,6,0
chr10	83761386	.	AACC	A	2125.89	PASS	AB=1.000;AC=21;AF=0.477;AN=44;BaseQRankSum=4.779;DP=534;FS=15.546;HRun=0;HaplotypeScore=148.4931;InbreedingCoeff=-0.2057;MQ=47.24;MQ0=22;MQRankSum=-4.958;QD=6.27;ReadPosRankSum=0.085;VQSLOD=2.0692;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/1:14,0:14:69.38:69,0,69	0/0:75,0:16:3.97:0,4,356	0/0:65,1:10:20.58:0,21,209	0/1:31,0:30:41.30:41,0,390	0/1:21,0:21:7.54:8,0,278	0/1:23,0:22:99:115,0,101	./.	0/0:14,0:14:9.05:0,9,220	0/1:30,0:30:85.16:85,0,202	0/1:24,0:24:95.69:96,0,109	0/0:24,0:24:39.85:0,40,392	0/1:12,0:12:10.92:11,0,186	0/1:17,0:15:31.14:31,0,166	0/1:27,0:27:8.46:111,0,8	0/1:30,0:30:14.41:43,0,14	0/1:21,0:19:25.08:122,0,25	1/1:9,0:7:17.87:208,18,0	./.	./.	./.	0/1:12,0:12:9.97:10,0,107	0/0:13,0:13:9.54:0,10,229	0/1:22,0:20:34.31:34,0,192	1/1:17,0:16:33.06:392,33,0	1/1:19,6:24:49.95:810,50,0	./.	1/1:3,1:3:6.02:88,6,0
chr10	83761400	.	ACC	A	2254.06	PASS	AB=0.967;AC=24;AF=0.545;AN=44;BaseQRankSum=1.366;DP=587;FS=2.101;HRun=2;HaplotypeScore=152.4495;InbreedingCoeff=-0.2838;MQ=50.44;MQ0=32;MQRankSum=-2.841;QD=5.76;ReadPosRankSum=-0.247;VQSLOD=-0.0761;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:12,0:12:15.36:15,0,46	0/0:90,1:20:21.95:0,22,264	0/0:69,0:12:14.68:0,15,162	0/1:24,2:27:73.98:74,0,120	0/1:27,0:27:69.25:69,0,115	0/1:23,0:22:33.40:33,0,65	./.	0/1:16,2:18:40.17:73,0,40	0/0:31,0:30:1.35:0,1,204	0/1:27,0:27:48.34:48,0,75	0/1:19,1:21:3.30:3,0,118	0/1:14,1:15:28.57:29,0,113	0/1:18,1:17:55.92:60,0,56	0/1:28,0:28:14.30:87,0,14	1/1:24,0:24:4.86:41,5,0	0/1:27,0:25:5.50:22,0,5	1/1:12,3:13:27.07:318,27,0	./.	./.	./.	0/1:14,0:14:6.37:6,0,60	0/1:14,0:14:59.19:68,0,59	0/1:21,1:20:41.32:41,0,72	1/1:15,6:19:38.79:397,39,0	1/1:21,9:29:56.10:884,56,0	./.	1/1:6,0:4:9.03:129,9,0
chr10	83761401	.	CCAAAAAAAAAAAA	C	3842.43	PASS	AC=14;AF=0.318;AN=44;BaseQRankSum=-0.474;DP=586;FS=10.673;HRun=0;HaplotypeScore=236.6029;InbreedingCoeff=0.8459;MQ=48.42;MQ0=32;MQRankSum=-0.346;QD=22.34;ReadPosRankSum=3.512;VQSLOD=1.2579;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:4,8:12:14.93:425,15,0	0/0:88,0:18:1.33:0,1,396	0/0:71,0:12:18.20:0,18,205	0/0:27,0:27:66.16:0,66,2480	0/0:27,0:27:67.97:0,68,2306	1/1:6,17:22:16.90:539,17,0	./.	0/0:18,0:18:33.01:0,33,1298	1/1:6,25:30:11.73:858,12,0	1/1:5,20:27:1.50:421,1,0	0/0:22,0:22:57.65:0,58,2397	0/0:16,0:16:43.93:0,44,1551	0/0:19,0:17:45.14:0,45,1613	1/1:4,21:28:22.83:765,23,0	1/1:1,22:24:13.75:366,14,0	1/1:9,18:25:3.23:469,3,0	0/0:5,0:13:26.90:0,27,263	./.	./.	./.	0/0:14,0:14:27.03:0,27,759	0/0:14,0:14:42.14:0,42,1330	0/0:23,0:20:42.60:0,43,1546	0/0:13,0:19:36.15:0,36,266	0/0:17,0:28:66.46:0,66,749	./.	0/0:3,0:4:9.02:0,9,107
chr10	83761402	.	CA	C	168.27	PASS	AB=0.969;AC=19;AF=0.432;AN=44;BaseQRankSum=4.241;DP=586;FS=1.147;HRun=12;HaplotypeScore=154.7551;InbreedingCoeff=0.1937;MQ=48.81;MQ0=32;MQRankSum=-2.455;QD=0.52;ReadPosRankSum=2.515;VQSLOD=0.0203;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:12,0:12:2.88:13,3,0	0/0:85,1:18:12.66:0,13,104	0/0:70,1:13:15.71:0,16,98	0/1:27,1:27:11.88:12,0,211	0/1:27,1:28:8.13:8,0,276	1/1:23,0:22:10.50:32,10,0	./.	0/1:18,1:19:3.14:3,0,103	0/1:31,0:30:3.34:3,0,52	0/1:26,0:26:15.48:26,0,15	0/0:22,0:22:34.73:0,35,332	0/0:16,0:16:33.36:0,33,238	0/0:19,0:17:26.30:0,26,211	1/1:28,0:28:17.54:66,18,0	1/1:24,0:24:9.08:40,9,0	0/1:26,0:24:7.83:8,0,27	0/1:15,0:13:1.49:7,0,1	./.	./.	./.	0/0:14,0:14:15:0,15,133	0/1:12,2:14:28.58:29,0,117	0/0:22,1:20:7.05:0,7,215	1/1:21,0:19:16.28:52,16,0	0/1:28,1:28:19.57:20,0,20	./.	0/0:6,0:4:2.97:0,3,9
chr10	83761682	.	A	ATTAC	6335.95	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.255;DP=697;FS=7.887;HRun=0;HaplotypeScore=133.7108;InbreedingCoeff=0.9878;MQ=98.31;MQ0=0;MQRankSum=-13.920;QD=50.69;ReadPosRankSum=-3.603;VQSLOD=4.3675;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,21:31:58.08:1427,58,0	0/0:12,0:12:33.04:0,33,494	0/0:35,0:35:78.23:0,78,1277	0/0:44,0:44:99:0,102,1684	0/0:28,0:27:57.17:0,57,977	0/0:26,0:26:66.21:0,66,1122	0/0:28,0:28:75.24:0,75,1296	1/1:10,11:21:48.16:1191,48,0	0/0:18,0:18:45.15:0,45,795	0/0:41,0:41:99:0,105,1816	0/0:16,0:16:30.09:0,30,502	0/0:30,0:30:78.27:0,78,1378	0/0:24,0:24:57.19:0,57,991	0/0:26,0:26:72.25:0,72,1257	0/0:36,0:36:93.32:0,93,1634	0/0:31,0:31:84.29:0,84,1481	0/0:27,0:26:72.25:0,72,1272	0/0:19,0:19:57.19:0,57,984	1/1:9,11:20:48.11:1072,48,0	1/1:5,12:18:39.09:935,39,0	1/1:5,10:16:25.43:589,25,0	0/0:18,0:18:48.15:0,48,803	0/0:17,0:17:42.14:0,42,742	0/0:32,0:32:87.28:0,87,1507	0/0:19,0:19:42.14:0,42,731	0/0:42,0:42:99:0,108,1845	1/1:2,15:19:45.15:1121,45,0	0/0:3,0:3:9.03:0,9,159
chr10	83764369	.	GT	G	2041.79	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.865;DP=518;FS=15.745;HRun=7;HaplotypeScore=77.2870;InbreedingCoeff=0.9920;MQ=69.72;MQ0=1;MQRankSum=-7.346;QD=19.63;ReadPosRankSum=-1.123;VQSLOD=2.0111;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,12:24:54.96:443,55,0	0/0:16,0:16:48.15:0,48,593	0/0:18,0:14:12.94:0,13,157	0/0:16,0:15:24.18:0,24,256	0/0:16,0:16:42.11:0,42,504	0/0:25,0:25:66.16:0,66,779	0/0:18,0:18:45.14:0,45,566	1/1:5,6:10:23.53:220,24,0	0/0:12,0:12:27.06:0,27,313	0/0:23,0:23:48.15:0,48,600	0/0:25,0:25:66.07:0,66,763	0/0:9,0:9:24.08:0,24,302	0/0:11,0:11:27.06:0,27,313	0/0:14,0:14:36.11:0,36,452	0/0:26,0:26:60.19:0,60,753	0/0:13,0:13:33.11:0,33,415	0/0:32,0:32:72.17:0,72,860	0/0:23,0:23:54.17:0,54,670	1/1:9,13:21:48.08:475,48,0	1/1:5,12:20:47.16:432,47,0	1/1:4,5:9:20.97:180,21,0	0/0:16,0:16:42.13:0,42,528	0/0:20,0:19:51.16:0,51,641	0/0:22,0:22:66.18:0,66,800	0/0:24,0:24:60.18:0,60,741	0/0:24,0:23:63.19:0,63,780	1/1:3,13:18:50.90:480,51,0	0/0:11,0:11:27.09:0,27,340
chr10	83764377	.	GT	G	669.92	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.094;DP=507;FS=18.754;HRun=7;HaplotypeScore=83.5206;InbreedingCoeff=0.9329;MQ=60.59;MQ0=2;MQRankSum=-7.988;QD=6.44;ReadPosRankSum=-0.466;VQSLOD=-0.0283;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,10:26:34.02:310,34,0	0/0:17,0:17:51.16:0,51,638	0/0:14,0:9:6.63:0,7,96	0/0:11,0:10:15.50:0,16,175	0/0:14,0:14:41.15:0,41,460	0/0:25,0:25:72.22:0,72,888	0/0:20,0:19:52.71:0,53,633	1/1:12,1:12:10.38:67,10,0	0/0:8,0:8:7.79:0,8,213	0/0:22,0:22:60.14:0,60,727	0/0:22,0:22:51.78:0,52,656	0/0:12,0:12:34.32:0,34,379	0/0:10,0:10:21.07:0,21,264	0/0:15,0:15:39.12:0,39,485	0/0:26,0:26:57.17:0,57,704	0/0:12,0:12:28.80:0,29,408	0/0:28,0:28:75.23:0,75,924	0/0:21,0:22:51.40:0,51,666	1/1:19,3:20:24.87:178,25,0	1/1:20,0:20:9.54:82,10,0	1/1:5,1:6:10.13:62,10,0	0/0:17,0:17:45.13:0,45,551	0/0:19,0:18:51.14:0,51,617	0/0:26,0:26:69.20:0,69,842	0/0:26,0:26:69.21:0,69,855	0/0:24,0:23:66.20:0,66,815	1/1:16,1:16:28.85:150,29,0	0/0:13,0:13:39.08:0,39,457
chr10	83764399	.	TG	T	982.60	PASS	AB=0.820;AC=7;AF=0.125;AN=56;BaseQRankSum=11.828;DP=552;FS=2.951;HRun=1;HaplotypeScore=91.8070;InbreedingCoeff=0.1529;MQ=55.42;MQ0=9;MQRankSum=-7.361;QD=8.77;ReadPosRankSum=-3.143;VQSLOD=0.0708;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,2:25:40.74:394,41,0	0/0:19,0:19:57.16:0,57,693	0/0:11,0:6:0.46:0,0,33	0/0:12,1:6:6.02:0,6,54	0/0:21,0:21:47.52:0,48,662	0/0:25,0:25:72.16:0,72,841	0/0:24,0:22:64.33:0,64,698	0/1:18,1:15:35.67:36,0,133	0/0:10,0:10:25.16:0,25,265	0/0:22,0:22:63.19:0,63,773	0/0:19,0:19:54.72:0,55,616	0/0:14,0:13:35.44:0,35,385	0/0:12,0:12:10.93:0,11,281	0/0:16,0:16:32.43:0,32,407	0/0:24,0:24:60.12:0,60,687	0/0:9,0:9:16.88:0,17,274	0/0:30,0:29:71.13:0,71,876	0/0:24,0:24:50.66:0,51,744	0/1:25,3:26:99:140,0,214	0/1:14,3:17:29.84:217,0,30	0/1:1,3:4:11.78:81,0,12	0/0:19,0:19:57.02:0,57,667	0/0:21,0:20:56.48:0,56,610	0/0:31,0:31:82.91:0,83,917	0/0:31,0:31:83.80:0,84,970	0/0:26,0:25:68.30:0,68,827	0/1:15,4:19:99:250,0,108	0/0:19,0:18:53.95:0,54,598
chr10	83764415	.	GT	G	362.41	PASS	AB=0.852;AC=8;AF=0.143;AN=56;BaseQRankSum=1.544;DP=540;FS=10.684;HRun=13;HaplotypeScore=90.4492;InbreedingCoeff=0.2784;MQ=58.01;MQ0=12;MQRankSum=1.781;QD=2.79;ReadPosRankSum=2.929;VQSLOD=-0.5293;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:23:2.22:21,2,0	0/0:15,1:16:16.95:0,17,304	0/0:14,0:4:2.64:0,3,10	0/0:15,0:5:8.49:0,8,55	0/1:21,2:24:5.10:5,0,405	0/0:21,2:25:13.05:0,13,414	0/0:19,1:18:15.01:0,15,286	0/0:26,0:23:37.24:0,37,168	0/0:10,0:10:30.05:0,30,291	0/0:21,0:22:16.97:0,17,303	0/1:14,2:17:5.09:5,0,240	0/1:10,2:13:17.81:18,0,175	0/0:12,2:14:8.12:0,8,231	0/0:10,0:13:23.87:0,24,214	0/0:14,0:20:38.88:0,39,354	0/0:13,0:13:24.72:0,25,213	0/0:29,3:30:9.17:0,9,533	0/1:16,5:23:96.21:96,0,135	0/0:23,0:21:29.76:0,30,132	0/0:17,0:19:24.29:0,24,126	0/0:5,0:5:5.67:0,6,29	0/0:23,0:23:16.41:0,16,452	0/0:17,0:18:41.90:0,42,389	0/0:23,3:26:3.38:0,3,512	1/1:7,19:29:50.79:346,51,0	0/0:18,1:19:20.12:0,20,340	0/0:20,0:20:32.92:0,33,156	0/0:15,1:15:19.99:0,20,342
chr10	83764418	.	T	TTTG	1098.77	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=8.997;DP=538;FS=8.426;HRun=0;HaplotypeScore=107.3363;InbreedingCoeff=0.7284;MQ=60.18;MQ0=12;MQRankSum=-4.387;QD=9.64;ReadPosRankSum=-4.064;VQSLOD=1.3676;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:14,7:22:3.15:222,3,0	0/0:15,0:15:45.04:0,45,634	0/0:15,0:5:4.97:0,5,18	0/0:15,0:5:8.95:0,9,35	0/0:24,0:24:68.80:0,69,930	0/0:24,0:24:69:0,69,930	0/0:20,0:18:48.90:0,49,655	1/1:28,0:24:30.29:354,30,0	0/0:11,0:11:30.10:0,30,500	0/0:23,0:23:64.83:0,65,797	0/0:18,0:18:50.91:0,51,601	0/0:14,0:13:33:0,33,413	0/0:13,0:13:33.08:0,33,452	0/0:12,0:12:26.95:0,27,365	0/0:20,0:20:45.04:0,45,649	0/0:14,0:14:37.33:0,37,502	0/0:32,0:30:84.17:0,84,1217	0/0:22,0:22:60.53:0,61,709	1/1:22,0:20:6.80:235,7,0	1/1:19,0:19:12.81:218,13,0	1/1:4,0:4:0.58:28,1,0	0/0:24,0:24:66.12:0,66,988	0/0:18,0:18:54.01:0,54,743	0/0:25,0:25:69.22:0,69,1071	0/0:29,0:29:66.17:0,66,723	0/0:20,0:20:54.10:0,54,712	0/1:19,0:19:11.44:196,0,11	0/0:16,0:15:42.06:0,42,655
chr10	83764419	.	T	TTG	2214.90	PASS	AB=0.806;AC=10;AF=0.179;AN=56;BaseQRankSum=3.733;DP=540;FS=11.920;HRun=0;HaplotypeScore=93.4034;InbreedingCoeff=0.5968;MQ=61.20;MQ0=12;MQRankSum=-5.086;QD=16.78;ReadPosRankSum=-3.554;VQSLOD=1.7815;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:61.28:61,0,118	0/0:15,0:15:44.95:0,45,575	0/0:14,0:5:6.46:0,6,36	0/1:16,0:6:0.02:0,0,26	0/0:23,0:23:68.71:0,69,841	0/0:24,0:24:68.79:0,69,844	0/0:19,0:17:48.80:0,49,596	1/1:10,19:26:33.07:752,33,0	0/0:11,0:11:33.09:0,33,475	0/0:24,0:24:67.74:0,68,764	0/0:18,0:18:53.36:0,53,558	0/0:14,0:13:32.90:0,33,371	0/0:13,0:13:33.08:0,33,416	0/0:12,0:12:26.87:0,27,331	0/0:20,0:20:44.96:0,45,592	0/0:14,0:14:37.32:0,37,465	0/0:32,0:30:84.16:0,84,1104	0/0:23,0:23:62.62:0,63,646	0/1:9,12:20:0.92:547,0,1	1/1:4,12:18:40.46:483,40,0	1/1:2,2:5:8.62:78,9,0	0/0:24,0:24:69.02:0,69,917	0/0:18,0:18:53.92:0,54,681	0/0:25,0:25:69.10:0,69,963	0/0:28,0:28:66.09:0,66,620	0/0:20,0:20:54.09:0,54,664	0/1:6,12:19:14.13:446,0,14	0/0:16,0:15:41.97:0,42,585
chr10	83764609	.	ATGAGAGAGAGAG	A	450.02	PASS	AB=0.962;AC=7;AF=0.125;AN=56;BaseQRankSum=6.539;DP=504;FS=4.666;HRun=0;HaplotypeScore=173.3608;InbreedingCoeff=0.6511;MQ=76.67;MQ0=7;MQRankSum=-3.918;QD=5.77;ReadPosRankSum=-2.983;VQSLOD=1.8078;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:28.40:0,28,412	0/0:8,0:8:9:0,9,300	0/0:18,0:15:22.04:0,22,251	0/0:25,0:17:24.94:0,25,240	0/0:12,0:10:17.99:0,18,358	0/0:21,0:20:56.12:0,56,1729	0/0:33,0:32:72.01:0,72,1165	0/0:26,0:26:0.53:0,1,1	0/0:20,0:20:52.91:0,53,1604	0/0:14,0:14:39:0,39,820	0/0:8,0:8:13.21:0,13,119	0/0:20,0:22:53.97:0,54,1232	0/0:20,0:20:59.44:0,59,1640	0/0:16,0:16:39.01:0,39,849	0/0:20,0:23:62.87:0,63,1554	0/0:16,0:16:45.03:0,45,703	0/0:23,0:23:56.30:0,56,773	0/0:21,0:21:22.39:0,22,606	1/1:11,2:13:6.02:134,6,0	1/1:10,3:13:9.03:170,9,0	1/1:26,1:27:9.14:119,9,0	0/0:8,0:7:17.90:0,18,137	0/0:9,0:9:15:0,15,393	0/0:29,0:29:67.13:0,67,2270	0/0:7,0:7:9.01:0,9,169	0/0:20,0:19:56.95:0,57,909	0/1:24,1:25:99:157,0,136	0/0:1,0:1:2.99:0,3,24
chr10	83764610	.	TGAGA	T	605.24	PASS	AB=0.890;AC=18;AF=0.429;AN=42;BaseQRankSum=4.638;DP=514;FS=15.656;HRun=0;HaplotypeScore=103.2786;InbreedingCoeff=0.5464;MQ=76.02;MQ0=7;MQRankSum=0.973;QD=2.79;ReadPosRankSum=-1.201;VQSLOD=0.7372;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:14.27:83,14,0	0/0:8,0:8:3.01:0,3,70	./.	./.	0/0:12,0:10:6:0,6,65	0/0:22,0:21:24.04:0,24,314	0/1:23,7:31:24.75:81,0,25	./.	0/0:20,0:20:26.88:0,27,413	0/0:11,0:14:4.94:0,5,59	./.	0/0:24,0:23:17.84:0,18,169	0/0:20,0:20:27.02:0,27,401	0/0:18,0:19:20.81:0,21,340	0/0:23,0:25:20.33:0,20,167	1/1:16,0:16:12.04:181,12,0	1/1:16,7:23:9.03:139,9,0	1/1:15,6:21:4.58:90,5,0	1/1:14,0:14:3:28,3,0	1/1:13,0:13:3:28,3,0	1/1:25,0:25:3.13:12,3,0	./.	0/0:9,0:9:5.85:0,6,84	0/0:28,0:30:38.49:0,38,529	./.	1/1:17,4:20:7.25:96,7,0	0/1:26,0:26:21.92:22,0,28	./.
chr10	83764935	.	G	GC	74.13	PASS	AB=1.000;AC=13;AF=0.250;AN=52;BaseQRankSum=-2.395;DP=82;FS=23.541;HRun=0;HaplotypeScore=49.5343;InbreedingCoeff=0.4094;MQ=67.80;MQ0=0;MQRankSum=4.075;QD=4.94;ReadPosRankSum=-3.418;VQSLOD=0.5524;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:2.90:16,3,0	0/0:1,0:1:0.89:0,1,2	1/1:2,0:2:1.25:3,1,0	0/1:5,0:5:0.63:1,0,23	0/0:2,0:2:0:0,0,0	0/0:2,0:2:1.72:0,2,4	0/0:5,0:5:7.05:0,7,21	1/1:1,0:1:3.01:44,3,0	0/0:4,0:4:6.96:0,7,20	0/0:1,0:1:2.04:0,2,6	0/0:1,0:1:0.89:0,1,2	0/0:6,0:6:9.96:0,10,43	0/0:5,0:5:6.73:0,7,20	0/0:3,0:3:4.11:0,4,11	0/0:3,0:3:5.41:0,5,15	0/0:2,0:2:4.50:0,4,16	0/0:7,0:7:4.74:0,5,13	0/0:1,0:1:2.04:0,2,6	1/1:2,0:2:5.99:49,6,0	1/1:2,0:2:6.01:68,6,0	./.	0/0:5,0:4:4.28:0,4,11	0/0:4,0:4:6.07:0,6,19	0/0:3,0:2:2.92:0,3,8	0/0:7,0:7:8.17:0,8,21	0/0:3,0:3:2.75:0,3,7	1/1:0,1:1:2.88:15,3,0	./.
chr10	83765003	.	A	AG	1114.94	PASS	AC=12;AF=0.240;AN=50;BaseQRankSum=7.099;DP=157;FS=26.082;HRun=3;HaplotypeScore=30.3556;InbreedingCoeff=0.7664;MQ=64.42;MQ0=2;MQRankSum=-5.940;QD=24.24;ReadPosRankSum=-0.321;VQSLOD=1.5328;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,9:11:27.09:341,27,0	0/0:1,0:1:3.01:0,3,35	0/0:13,0:9:20.95:0,21,217	0/0:8,0:2:4.56:0,5,17	./.	0/0:4,0:4:12.04:0,12,144	0/0:11,0:11:27.07:0,27,312	1/1:4,2:6:15.05:196,15,0	0/0:8,0:8:20.96:0,21,200	0/0:1,0:1:3.01:0,3,36	0/0:3,0:3:9.03:0,9,108	0/0:8,0:8:21.02:0,21,236	0/0:7,0:7:21.06:0,21,243	0/0:5,0:5:15.05:0,15,177	0/0:11,0:11:21.06:0,21,243	0/0:2,0:2:6.02:0,6,72	0/0:4,0:4:9.03:0,9,108	0/0:2,0:2:6.02:0,6,72	1/1:2,4:6:14.11:195,14,0	1/1:0,2:2:6.02:75,6,0	1/1:3,7:10:11.99:112,12,0	0/0:5,0:5:15.05:0,15,180	0/0:4,0:4:12.02:0,12,130	0/0:6,0:6:8.86:0,9,108	./.	0/0:4,0:4:9.03:0,9,108	1/1:2,9:11:27.09:364,27,0	./.
chr10	83765392	.	ATGTGTGTGTG	A	1973.92	PASS	AC=22;AF=0.423;AN=52;BaseQRankSum=7.550;DP=572;FS=15.386;HRun=0;HaplotypeScore=161.7703;InbreedingCoeff=0.7526;MQ=62.53;MQ0=7;MQRankSum=-5.673;QD=11.28;ReadPosRankSum=-0.469;VQSLOD=1.7111;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:37:33.55:0,34,888	1/1:6,4:10:2.65:88,3,0	./.	./.	0/0:14,0:14:24.07:0,24,845	0/0:28,0:26:30.09:0,30,906	1/1:12,3:14:3.01:75,3,0	0/0:25,0:24:22.85:0,23,500	0/0:18,0:19:20.94:0,21,681	1/1:19,3:21:5.98:150,6,0	1/1:5,2:7:3.01:89,3,0	0/0:18,0:18:18.06:0,18,731	0/0:16,0:15:9.03:0,9,336	0/0:21,0:21:21.05:0,21,719	1/1:12,8:20:17.99:402,18,0	1/1:9,2:11:6.02:145,6,0	1/1:25,8:33:12.04:320,12,0	1/1:16,3:19:6.02:128,6,0	0/0:21,0:20:3.95:0,4,94	0/0:7,0:7:6.02:0,6,218	0/0:60,0:58:48.15:0,48,1474	0/0:21,0:21:12.04:0,12,420	0/0:6,0:6:3.01:0,3,91	0/0:40,0:40:60.21:0,60,2528	1/1:9,4:13:6.02:177,6,0	1/1:11,4:15:9.03:143,9,0	0/0:11,0:11:15.05:0,15,506	1/1:3,7:10:15.05:442,15,0
chr10	83766542	.	TA	T	2411.92	PASS	AB=0.958;AC=11;AF=0.196;AN=56;BaseQRankSum=11.324;DP=709;FS=2.317;HRun=9;HaplotypeScore=68.9534;InbreedingCoeff=0.9328;MQ=67.41;MQ0=3;MQRankSum=0.205;QD=17.48;ReadPosRankSum=-1.699;VQSLOD=3.4953;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,1395	0/0:12,0:12:30.09:0,30,346	0/0:26,0:15:18.15:0,18,227	0/1:22,1:12:0.46:0,0,222	0/0:33,0:33:84.25:0,84,962	0/0:28,0:28:81.24:0,81,935	0/0:28,1:29:44.75:0,45,769	1/1:6,21:27:60.01:549,60,0	0/0:25,1:26:44.74:0,45,760	0/0:20,1:21:36:0,36,663	0/0:17,1:19:14.95:0,15,394	0/0:26,0:26:69.19:0,69,785	0/0:24,0:24:69.18:0,69,775	0/0:24,0:24:66.18:0,66,744	0/0:26,0:26:72.19:0,72,813	0/0:28,0:28:75.22:0,75,866	0/0:33,1:34:68.81:0,69,1036	0/0:22,0:22:60.14:0,60,678	1/1:5,25:29:74.70:665,75,0	1/1:2,22:24:63.03:576,63,0	1/1:1,10:11:27.01:247,27,0	0/0:22,0:22:58.71:0,59,648	0/0:30,0:30:81.22:0,81,915	0/0:23,0:23:66.15:0,66,746	0/0:19,0:19:48.13:0,48,546	0/0:42,0:42:99:0,116,1279	1/1:1,22:23:59.95:549,60,0	0/0:13,0:13:33.10:0,33,381
chr10	83767070	.	CATGT	C	3086.45	PASS	AB=0.975;AC=16;AF=0.286;AN=56;BaseQRankSum=5.487;DP=766;FS=0.488;HRun=0;HaplotypeScore=130.0025;InbreedingCoeff=0.6898;MQ=77.31;MQ0=3;MQRankSum=0.434;QD=12.15;ReadPosRankSum=-0.277;VQSLOD=2.9413;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:53:54.18:0,54,930	0/0:12,0:12:18.04:0,18,345	0/1:28,0:24:0.28:0,0,0	0/0:31,0:28:3.01:0,3,69	0/1:18,1:19:11.02:11,0,746	0/0:22,0:22:48.16:0,48,1108	1/1:20,10:30:24.08:377,24,0	0/0:42,0:41:18.06:0,18,396	0/0:23,0:23:54.17:0,54,1222	1/1:8,14:22:42.14:656,42,0	1/1:6,9:15:21.07:330,21,0	0/0:31,0:31:63.20:0,63,1441	0/0:33,0:33:60.21:0,60,1416	0/0:35,0:35:54.19:0,54,1233	1/1:15,27:41:60.20:943,60,0	1/1:13,20:32:39.13:613,39,0	1/1:16,10:26:21.07:330,21,0	0/0:17,0:22:6.02:0,6,105	0/0:30,0:29:27.09:0,27,631	0/1:19,0:20:4.01:4,0,795	0/0:58,0:58:99:0,108,2381	0/1:18,1:19:8.02:8,0,806	0/0:7,0:7:9.03:0,9,213	0/0:33,0:34:42.14:0,42,883	0/0:9,0:17:27.09:0,27,508	0/0:13,0:26:45.11:0,45,696	0/0:22,0:22:51.18:0,51,1202	0/0:6,0:13:21.07:0,21,364
chr10	83767574	.	CTTACGAG	C	5232.82	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.758;DP=663;FS=8.852;HRun=0;HaplotypeScore=159.3247;InbreedingCoeff=0.9961;MQ=84.27;MQ0=0;MQRankSum=-11.465;QD=51.30;ReadPosRankSum=-1.981;VQSLOD=3.6565;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,135,5411	0/0:8,0:8:21.07:0,21,792	0/0:25,0:25:66.23:0,66,2388	0/0:21,0:21:57.20:0,57,2098	0/0:12,0:12:36.12:0,36,1448	0/0:21,0:21:60.16:0,60,2226	0/0:27,0:27:81.28:0,81,3071	1/1:5,27:32:81.22:1859,81,0	0/0:23,0:23:66.21:0,66,2543	0/0:19,0:19:51.18:0,51,1997	0/0:11,0:11:29.46:0,29,1007	0/0:41,0:41:99:0,123,4816	0/0:28,0:28:81.26:0,81,2853	0/0:32,0:32:93.32:0,93,3682	0/0:39,0:39:99:0,117,4507	0/0:20,0:20:60.21:0,60,2286	0/0:34,0:34:99:0,102,4095	0/0:38,0:38:99:0,108,4283	1/1:8,9:17:27.09:712,27,0	1/1:1,7:8:18.06:474,18,0	1/1:10,15:25:30.09:686,30,0	0/0:17,0:17:48.16:0,48,1872	0/0:11,0:11:30.09:0,30,1106	0/0:29,0:29:84.27:0,84,3241	0/0:18,0:18:51.17:0,51,1894	0/0:29,0:29:81.27:0,81,3046	1/1:0,20:20:57.20:1502,57,0	0/0:9,0:9:24.08:0,24,963
chr10	83768878	.	A	AAATC	4061.28	PASS	AC=14;AF=0.269;AN=52;BaseQRankSum=-2.950;DP=673;FS=12.525;HRun=0;HaplotypeScore=123.5500;InbreedingCoeff=0.8711;MQ=67.66;MQ0=2;MQRankSum=-1.681;QD=25.87;ReadPosRankSum=-1.156;VQSLOD=2.5973;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,28:43:69.24:1655,69,0	0/0:8,0:8:21.07:0,21,335	0/0:24,0:20:15.05:0,15,206	0/0:26,0:23:27.08:0,27,406	0/0:28,0:28:51.17:0,51,793	0/0:22,0:22:45.15:0,45,719	0/0:37,0:37:54.15:0,54,813	0/0:24,0:24:6.39:0,6,32	0/0:22,0:22:39.13:0,39,619	0/0:37,0:37:75.25:0,75,1170	0/0:18,0:19:35.84:0,36,515	0/0:26,0:26:46.28:0,46,741	0/0:22,0:22:42.14:0,42,671	0/0:28,0:28:69.24:0,69,1102	0/0:30,0:30:60.17:0,60,891	0/0:21,0:21:42.14:0,42,670	0/0:41,0:41:84.25:0,84,1294	1/1:8,10:20:33.11:790,33,0	1/1:11,0:10:5.98:63,6,0	./.	./.	0/0:25,0:25:54.18:0,54,857	0/0:22,0:22:54.18:0,54,854	0/0:37,0:37:90.30:0,90,1414	1/1:16,11:27:24.08:575,24,0	1/1:10,1:29:6.93:892,7,0	1/1:9,0:9:3.01:34,3,0	1/1:12,0:17:3.01:52,3,0
chr10	83768905	.	T	TA	1091.95	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.122;DP=607;FS=6.565;HRun=2;HaplotypeScore=90.1170;InbreedingCoeff=0.8862;MQ=71.28;MQ0=1;MQRankSum=-5.895;QD=23.74;ReadPosRankSum=-3.213;VQSLOD=2.2930;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:98.79:0,99,940	0/0:10,0:10:30.10:0,30,419	0/0:33,0:28:78.08:0,78,984	0/0:27,0:24:72.23:0,72,986	0/0:24,0:24:72.23:0,72,984	0/0:23,0:23:69.23:0,69,964	0/0:34,0:34:96.78:0,97,1323	1/1:4,15:19:44.12:596,44,0	0/0:18,0:18:54.18:0,54,755	0/0:31,0:31:87.29:0,87,1217	0/0:15,0:15:45.04:0,45,603	0/0:26,0:26:75.25:0,75,1047	0/0:20,0:20:57.19:0,57,796	0/0:28,0:28:84.28:0,84,1173	0/0:28,0:28:84.28:0,84,1171	0/0:16,0:16:48.16:0,48,671	0/0:39,0:39:99:0,117,1636	0/0:24,0:24:63.03:0,63,682	1/1:1,1:14:38.61:440,39,0	1/1:0,4:4:12.04:154,12,0	1/1:2,1:3:1.34:36,1,0	0/0:22,0:22:66.21:0,66,906	0/0:24,0:24:69.23:0,69,959	0/0:38,0:38:99:0,114,1593	0/0:12,0:12:29.93:0,30,273	0/0:24,0:23:62.25:0,62,528	1/1:0,0:6:2.97:20,3,0	0/0:6,0:6:11.95:0,12,143
chr10	83769107	.	C	CTGAG	5942.45	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-1.766;DP=709;FS=14.074;HRun=0;HaplotypeScore=119.2813;InbreedingCoeff=0.9988;MQ=84.51;MQ0=1;MQRankSum=-11.872;QD=51.67;ReadPosRankSum=-4.614;VQSLOD=3.9003;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.32:0,93,1711	0/0:12,0:12:36.10:0,36,608	0/0:33,0:31:72.24:0,72,1206	0/0:26,0:25:57.20:0,57,1046	0/0:24,0:24:69.20:0,69,1207	0/0:13,0:13:33.11:0,33,607	0/0:35,0:35:81.24:0,81,1428	1/1:10,23:33:71.98:1877,72,0	0/0:22,0:22:66.21:0,66,1184	0/0:27,0:27:75.24:0,75,1346	0/0:15,0:15:45.11:0,45,793	0/0:47,0:47:99:0,135,2445	0/0:33,0:33:90.31:0,90,1639	0/0:29,0:29:84.27:0,84,1513	0/0:22,0:22:57.20:0,57,1049	0/0:29,0:29:81.26:0,81,1460	0/0:35,0:34:99:0,102,1881	0/0:25,0:25:69.17:0,69,1201	1/1:11,10:21:36.12:852,36,0	1/1:1,7:8:21.07:547,21,0	1/1:10,19:28:45.63:1123,46,0	0/0:21,0:21:57.18:0,57,988	0/0:14,0:14:42.14:0,42,773	0/0:47,0:47:99:0,135,2411	0/0:13,0:13:36.12:0,36,662	0/0:28,0:28:72.25:0,72,1325	1/1:7,16:24:63.17:1543,63,0	0/0:11,0:11:30.10:0,30,541
chr10	83769127	.	GCTC	G	2022.05	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=10.772;DP=658;FS=1.083;HRun=0;HaplotypeScore=111.4409;InbreedingCoeff=0.8792;MQ=73.74;MQ0=1;MQRankSum=-7.969;QD=14.44;ReadPosRankSum=-4.689;VQSLOD=2.3868;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:72.25:0,72,1445	0/0:8,0:8:24.08:0,24,460	0/0:29,0:24:39.13:0,39,708	0/1:32,0:29:10.45:10,0,726	0/0:21,0:21:48.14:0,48,893	0/0:11,0:11:30.09:0,30,545	0/0:28,0:28:69.24:0,69,1334	1/1:20,9:29:45.02:564,45,0	0/0:22,0:22:54.19:0,54,1107	0/0:23,0:23:57.19:0,57,1115	0/0:14,0:14:24.08:0,24,492	0/0:40,1:41:58.65:0,59,1853	0/0:27,0:27:66.23:0,66,1297	0/0:32,0:32:87.28:0,87,1714	0/0:21,0:21:50.19:0,50,921	0/0:31,0:31:75.25:0,75,1483	0/0:31,0:31:35.38:0,35,1429	0/0:23,0:23:60.18:0,60,1169	1/1:6,13:19:39.10:545,39,0	1/1:3,5:9:8.94:83,9,0	1/1:14,14:28:20.55:256,21,0	0/0:21,0:21:48.16:0,48,960	0/0:11,0:11:30.10:0,30,615	0/0:42,0:42:90.31:0,90,1798	0/0:12,1:13:27.07:0,27,469	0/0:27,0:27:66.23:0,66,1313	1/1:6,16:22:54.10:738,54,0	0/0:9,0:9:27.09:0,27,554
chr10	83769717	.	CG	C	3987.87	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=2.698;DP=471;FS=11.254;HRun=1;HaplotypeScore=52.5497;InbreedingCoeff=0.9589;MQ=82.99;MQ0=0;MQRankSum=-1.574;QD=34.38;ReadPosRankSum=0.093;VQSLOD=2.1807;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.21:0,72,963	1/1:0,5:5:15.04:192,15,0	0/0:15,0:15:42.05:0,42,521	0/0:12,0:12:32.88:0,33,374	0/0:9,0:9:27.08:0,27,361	0/0:17,0:17:48.08:0,48,644	1/1:3,15:18:54.15:702,54,0	0/0:15,0:15:42.03:0,42,535	0/0:22,0:22:66.18:0,66,915	1/1:0,9:9:23.99:270,24,0	1/1:1,6:7:20.66:260,21,0	0/0:16,0:16:48.06:0,48,607	0/0:12,0:12:36.10:0,36,486	0/0:22,0:22:66.20:0,66,905	1/1:0,26:26:57.19:794,57,0	1/1:6,13:19:57.11:697,57,0	1/1:12,20:32:84.33:1073,84,0	0/0:22,0:22:66.21:0,66,891	0/0:11,0:11:32.45:0,32,413	0/0:1,0:1:3.01:0,3,43	0/0:33,0:33:98.79:0,99,1243	0/0:13,0:13:39.10:0,39,510	0/0:11,0:11:33:0,33,375	0/0:36,0:36:99:0,108,1518	0/0:16,0:16:45.12:0,45,593	0/0:20,0:20:54.09:0,54,693	0/0:22,0:21:66.17:0,66,895	0/0:4,0:4:12.04:0,12,163
chr10	83769876	.	C	CA	6626.64	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.781;DP=762;FS=3.468;HRun=0;HaplotypeScore=80.7877;InbreedingCoeff=0.9995;MQ=89.12;MQ0=0;MQRankSum=-0.664;QD=43.31;ReadPosRankSum=-1.321;VQSLOD=4.7479;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,181,2476	0/0:14,0:14:39.13:0,39,545	0/0:31,0:31:93.31:0,93,1289	0/0:24,0:24:66.17:0,66,874	0/0:20,0:20:60.20:0,60,834	0/0:28,0:28:84.28:0,84,1172	0/0:30,0:30:87.29:0,87,1212	1/1:1,31:32:93.27:1417,93,0	0/0:23,0:23:69.23:0,69,965	0/0:27,0:27:78.26:0,78,1091	0/0:10,0:10:27.07:0,27,359	0/0:44,0:44:99:0,129,1804	0/0:30,0:30:90.30:0,90,1259	0/0:20,0:20:60.20:0,60,839	0/0:40,0:40:99:0,117,1636	0/0:37,0:37:99:0,111,1519	0/0:27,0:27:75.25:0,75,1049	0/0:29,0:29:87.29:0,87,1214	1/1:0,25:25:75.22:1133,75,0	1/1:0,14:14:42.14:671,42,0	1/1:1,50:51:99:2062,129,0	0/0:13,0:13:33.11:0,33,462	0/0:18,0:18:48.15:0,48,652	0/0:35,0:35:99:0,105,1447	0/0:12,0:12:36.12:0,36,504	0/0:26,0:26:78.26:0,78,1091	1/1:0,31:30:84.29:1343,84,0	0/0:10,0:10:30.08:0,30,402
chr10	83770767	.	G	GT	5710.61	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-3.196;DP=641;FS=1.601;HRun=1;HaplotypeScore=65.3991;InbreedingCoeff=0.9922;MQ=77.13;MQ0=0;MQRankSum=-2.135;QD=40.79;ReadPosRankSum=-0.091;VQSLOD=5.2310;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,1635	0/0:9,0:9:27.03:0,27,316	0/0:12,0:11:25.47:0,25,249	0/0:22,0:21:56.86:0,57,677	0/0:24,0:24:66.21:0,66,857	0/0:18,0:18:54.16:0,54,687	0/0:28,0:28:84.26:0,84,1075	1/1:1,21:22:66.16:925,66,0	0/0:23,0:23:69.20:0,69,878	0/0:21,0:21:51.16:0,51,661	0/0:12,0:12:36.10:0,36,452	0/0:27,0:27:81.23:0,81,1011	0/0:14,0:14:42.13:0,42,532	0/0:25,0:25:72.22:0,72,921	0/0:16,0:16:48.16:0,48,623	0/0:29,0:29:84.27:0,84,1090	0/0:34,0:34:99:0,99,1237	0/0:32,0:32:93.30:0,93,1206	1/1:1,16:17:48.16:720,48,0	1/1:1,19:20:54.14:784,54,0	1/1:2,54:57:99:2293,154,0	0/0:23,0:23:66.17:0,66,813	0/0:13,0:13:39.13:0,39,505	0/0:38,0:38:99:0,111,1441	0/0:13,0:13:36.10:0,36,453	0/0:22,0:22:66.19:0,66,831	1/1:1,23:23:66.22:989,66,0	0/0:4,0:4:12.04:0,12,156
chr10	83771087	.	T	TTGTG	14169.94	PASS	AB=0.566;AC=32;AF=0.571;AN=56;BaseQRankSum=2.101;DP=780;FS=4.503;HRun=0;HaplotypeScore=141.7615;InbreedingCoeff=0.8665;MQ=69.33;MQ0=3;MQRankSum=-3.459;QD=29.83;ReadPosRankSum=1.816;VQSLOD=4.7193;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,37:50:99:2569,105,0	1/1:3,0:17:30.30:136,30,0	0/0:31,0:30:58.68:0,59,824	0/0:30,0:29:41.14:0,41,844	0/0:28,0:29:75.25:0,75,1245	0/0:29,0:29:75.26:0,75,1272	1/1:8,0:42:83.60:420,84,0	1/1:22,16:39:54.16:1166,54,0	0/0:18,0:18:39.13:0,39,661	1/1:10,0:40:37.13:340,37,0	1/1:4,0:21:44.02:197,44,0	0/0:23,0:27:69.19:0,69,1037	0/0:36,0:36:96.33:0,96,1625	0/0:30,0:31:84.20:0,84,1311	0/1:5,0:25:3.68:151,0,4	1/1:6,0:28:55.26:248,55,0	0/1:9,0:34:77.23:275,0,77	1/1:3,24:27:56.93:1318,57,0	1/1:8,13:22:18.31:927,18,0	1/1:3,14:19:50.64:1118,51,0	1/1:11,27:39:74.99:1781,75,0	0/0:31,0:31:81.25:0,81,1324	0/0:16,0:16:42.14:0,42,708	0/0:27,0:27:81.26:0,81,1348	1/1:4,12:16:33.11:791,33,0	1/1:9,17:28:60.19:1390,60,0	1/1:6,14:20:45.15:1118,45,0	1/1:1,3:4:9.03:224,9,0
chr10	83771725	.	GA	G	4448.39	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.465;DP=610;FS=4.455;HRun=4;HaplotypeScore=70.1672;InbreedingCoeff=0.9927;MQ=87.20;MQ0=1;MQRankSum=-0.767;QD=32.47;ReadPosRankSum=-1.144;VQSLOD=4.9833;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,1872	0/0:4,0:4:12.04:0,12,168	0/0:15,0:15:42.13:0,42,564	0/0:26,0:26:65.40:0,65,896	0/0:17,0:17:51.17:0,51,709	0/0:17,0:17:48.16:0,48,672	0/0:16,0:16:48.13:0,48,636	1/1:3,34:37:99:1186,102,0	0/0:19,0:19:57.19:0,57,798	0/0:23,0:23:69.23:0,69,966	0/0:19,0:19:51.17:0,51,713	0/0:18,0:18:54.18:0,54,756	0/0:13,0:13:39.07:0,39,505	0/0:24,0:24:69.22:0,69,949	0/0:26,0:26:78.25:0,78,1075	0/0:26,0:26:75.25:0,75,1050	0/0:35,0:35:99:0,102,1427	0/0:14,0:14:42.10:0,42,566	1/1:1,21:22:63.13:707,63,0	1/1:0,11:11:33.10:396,33,0	1/1:1,36:37:99:1224,102,0	0/0:24,0:24:69.22:0,69,951	0/0:14,0:14:42.13:0,42,572	0/0:24,0:23:63.20:0,63,866	0/0:22,0:22:63.21:0,63,881	0/0:20,0:20:60.19:0,60,825	1/1:1,29:30:78.24:936,78,0	0/0:12,0:12:36.12:0,36,504
chr10	83772462	.	CG	C	7986.01	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=12.786;DP=613;FS=15.107;HRun=3;HaplotypeScore=61.5309;InbreedingCoeff=0.9996;MQ=83.39;MQ0=0;MQRankSum=-3.416;QD=32.46;ReadPosRankSum=1.931;VQSLOD=3.6782;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,47:47:99:1524,123,0	0/0:9,0:9:27.07:0,27,353	0/0:20,0:20:51.02:0,51,601	0/0:17,0:17:44.89:0,45,528	0/0:20,0:20:57.19:0,57,813	0/0:18,0:18:54.18:0,54,773	0/0:21,0:21:60.18:0,60,843	1/1:2,18:20:51.12:585,51,0	0/0:15,0:15:39.11:0,39,528	0/0:18,0:18:48.15:0,48,674	0/0:11,0:11:33.10:0,33,453	0/0:29,0:29:87.27:0,87,1215	0/0:19,0:19:57.15:0,57,773	0/0:22,0:22:60.20:0,60,858	0/0:22,0:22:63.20:0,63,883	0/0:23,0:23:63.20:0,63,888	0/0:26,0:26:78.23:0,78,1083	1/1:0,39:39:99:1264,102,0	1/1:1,18:19:52.98:636,53,0	1/1:0,11:11:33.10:406,33,0	1/1:0,19:19:45.14:557,45,0	0/0:21,0:21:54.17:0,54,754	0/0:20,0:20:54.18:0,54,775	0/0:36,0:36:99:0,102,1429	1/1:0,25:25:66.21:817,66,0	1/1:2,22:24:25.92:754,26,0	1/1:0,20:20:57.18:700,57,0	1/1:1,21:22:60.19:743,60,0
chr10	83773092	.	GA	G	1444.01	PASS	AB=0.858;AC=16;AF=0.286;AN=56;BaseQRankSum=1.524;DP=507;FS=2.296;HRun=11;HaplotypeScore=72.8235;InbreedingCoeff=0.6866;MQ=53.07;MQ0=28;MQRankSum=3.030;QD=8.20;ReadPosRankSum=0.309;VQSLOD=2.5233;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:45.11:0,45,480	1/1:1,6:7:14.98:123,15,0	0/0:50,0:10:5.63:0,6,104	0/1:50,1:10:8.15:8,0,44	0/0:23,0:21:26.92:0,27,444	0/0:12,0:12:24.95:0,25,258	1/1:5,11:15:26.96:222,27,0	0/0:29,0:34:33.57:0,34,242	0/0:13,0:12:23.45:0,23,204	1/1:0,8:8:23.97:197,24,0	1/1:4,10:14:26.96:221,27,0	0/0:6,0:4:5.04:0,5,38	0/0:13,0:12:21.03:0,21,225	0/0:18,0:18:34.10:0,34,352	0/1:5,10:15:2.02:192,0,2	1/1:2,5:8:22.51:162,23,0	1/1:5,22:28:61.95:497,62,0	0/0:18,0:16:35.27:0,35,356	0/1:11,1:18:5.61:6,0,57	0/0:3,0:10:22.61:0,23,118	0/0:2,0:2:0:0,0,0	0/1:8,1:8:0.58:1,0,200	0/0:10,0:10:24.94:0,25,254	0/0:7,0:8:14.87:0,15,142	0/0:12,0:12:16.61:0,17,191	0/0:24,0:24:33.97:0,34,308	0/0:22,0:23:24.55:0,25,123	0/0:13,0:14:35.68:0,36,361
chr10	83773375	.	T	TA	3040.47	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-9.125;DP=574;FS=5.855;HRun=9;HaplotypeScore=57.4401;InbreedingCoeff=0.9936;MQ=77.59;MQ0=0;MQRankSum=-1.629;QD=24.92;ReadPosRankSum=-0.581;VQSLOD=4.2243;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:33:46.84:0,47,138	0/0:7,0:7:17.94:0,18,148	0/0:24,0:24:29.75:0,30,288	0/0:14,0:14:29.02:0,29,236	0/0:21,0:21:47.95:0,48,412	0/0:16,0:16:41.99:0,42,365	0/0:19,0:19:56.96:0,57,487	1/1:10,26:36:75.20:829,75,0	0/0:18,0:18:44.97:0,45,388	0/0:23,0:23:62.92:0,63,534	0/0:30,0:30:74.89:0,75,642	0/0:19,0:19:53.98:0,54,466	0/0:16,0:16:47.97:0,48,412	0/0:13,0:13:29.96:0,30,254	0/0:26,0:26:68.95:0,69,591	0/0:22,0:23:49.98:0,50,415	0/0:28,0:28:68.86:0,69,576	0/0:10,0:10:29.99:0,30,260	1/1:4,16:20:51.13:558,51,0	1/1:0,24:24:69.08:734,69,0	1/1:2,9:11:27.07:299,27,0	0/0:19,0:19:50.94:0,51,431	0/0:15,0:15:44.99:0,45,391	0/0:23,0:23:62.97:0,63,543	0/0:16,0:16:41.46:0,41,343	0/0:32,0:32:77.81:0,78,657	1/1:2,28:30:72.19:796,72,0	0/0:7,0:7:15:0,15,130
chr10	83773478	.	AGGCGGT	A	4234.39	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.601;DP=527;FS=6.821;HRun=0;HaplotypeScore=116.0977;InbreedingCoeff=0.9990;MQ=75.79;MQ0=0;MQRankSum=-11.301;QD=59.64;ReadPosRankSum=-1.866;VQSLOD=4.5316;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,4795	0/0:8,0:8:24.08:0,24,831	0/0:12,0:12:36.09:0,36,992	0/0:19,0:19:46.40:0,46,1366	0/0:18,0:18:48.16:0,48,1711	0/0:21,0:21:60.21:0,60,2138	0/0:16,0:16:48.16:0,48,1712	1/1:4,20:23:57.18:1301,57,0	0/0:19,0:19:54.17:0,54,1790	0/0:20,0:20:57.16:0,57,1947	0/0:23,0:23:60.21:0,60,2125	0/0:25,0:25:69.22:0,69,2291	0/0:13,0:13:39.13:0,39,1375	0/0:15,0:15:42.14:0,42,1484	0/0:15,0:15:42.14:0,42,1452	0/0:14,0:14:42.14:0,42,1434	0/0:31,0:31:87.25:0,87,2905	0/0:27,0:27:78.27:0,78,2772	1/1:0,10:10:30.10:669,30,0	1/1:1,12:13:33.11:779,33,0	1/1:1,10:11:30.10:706,30,0	0/0:12,0:12:33.11:0,33,1152	0/0:17,0:17:48.16:0,48,1615	0/0:26,0:26:75.21:0,75,2587	0/0:12,0:12:36.12:0,36,1277	0/0:20,0:20:60.21:0,60,2106	1/1:2,11:13:33.11:779,33,0	0/0:24,0:24:72.25:0,72,2558
chr10	83773609	.	GA	G	2690.23	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.348;DP=533;FS=0.409;HRun=8;HaplotypeScore=56.4816;InbreedingCoeff=0.9907;MQ=68.11;MQ0=0;MQRankSum=-2.159;QD=22.61;ReadPosRankSum=-0.649;VQSLOD=3.7558;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1482	0/0:5,0:5:15.05:0,15,181	0/0:14,0:13:17.17:0,17,242	0/0:10,0:10:17.88:0,18,173	0/0:18,0:18:51.14:0,51,605	0/0:19,0:19:57.17:0,57,678	0/0:10,0:10:24.06:0,24,278	1/1:7,25:32:75.11:724,75,0	0/0:14,0:14:39.10:0,39,453	0/0:25,0:25:72.22:0,72,862	0/0:17,0:17:48.15:0,48,576	0/0:22,0:22:60.18:0,60,725	0/0:10,0:10:30.08:0,30,353	0/0:13,0:13:36.11:0,36,432	0/0:25,0:25:69.68:0,70,831	0/0:13,0:13:33.10:0,33,399	0/0:33,0:34:93.14:0,93,1088	0/0:20,0:20:54.17:0,54,652	1/1:3,15:18:45.07:434,45,0	1/1:1,14:15:39.06:376,39,0	1/1:3,25:28:66.10:637,66,0	0/0:9,0:9:24.07:0,24,290	0/0:16,0:16:48.15:0,48,579	0/0:28,0:28:78.23:0,78,931	0/0:15,0:15:45.14:0,45,544	0/0:25,0:25:63.19:0,63,751	1/1:1,25:26:72.11:694,72,0	0/0:10,0:10:27.08:0,27,326
chr10	83774733	.	G	GGGA	4205.10	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.559;DP=700;FS=0.446;HRun=0;HaplotypeScore=126.9587;InbreedingCoeff=0.9611;MQ=71.24;MQ0=0;MQRankSum=-11.029;QD=32.35;ReadPosRankSum=-4.114;VQSLOD=3.1009;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,138,2223	0/0:3,0:3:6.01:0,6,77	0/0:17,0:17:38.90:0,39,564	0/0:13,0:12:29.45:0,29,378	0/0:14,0:14:33.06:0,33,499	0/0:20,0:20:48.16:0,48,807	0/0:45,0:45:99:0,126,2061	1/1:6,11:17:34.29:561,34,0	0/0:25,0:25:72.09:0,72,1066	0/0:24,0:24:69.24:0,69,1155	0/0:7,0:7:21.07:0,21,351	0/0:43,0:43:99:0,129,2113	0/0:23,0:23:66.20:0,66,1055	0/0:36,0:36:99:0,105,1577	0/0:24,0:24:69.22:0,69,1105	0/0:22,0:22:63.18:0,63,1004	0/0:38,0:38:99:0,108,1709	0/0:34,0:34:93.21:0,93,1464	1/1:7,17:24:51.21:917,51,0	1/1:2,5:7:9.02:143,9,0	1/1:22,32:54:75.36:1256,75,0	0/0:23,0:23:60.20:0,60,995	0/0:13,0:13:33.10:0,33,523	0/0:39,0:38:99:0,111,1801	0/0:23,0:23:60.15:0,60,890	0/0:18,0:18:45.14:0,45,706	1/1:2,26:28:61.12:1329,61,0	0/0:17,0:17:45.15:0,45,756
chr10	83775221	.	G	GCAAGGGGGATACCTTCCCCT	10444.51	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.940;DP=601;FS=4.094;HRun=0;HaplotypeScore=309.1419;InbreedingCoeff=0.9836;MQ=66.60;MQ0=0;MQRankSum=-11.601;QD=139.26;ReadPosRankSum=-3.259;VQSLOD=3.8309;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,5415	0/0:13,0:13:36.12:0,36,1793	0/0:6,0:6:12.04:0,12,650	0/0:11,0:11:14.20:0,14,869	0/0:16,0:16:45.15:0,45,2365	0/0:17,0:17:51.18:0,51,2405	0/0:46,0:46:99:0,138,6642	1/1:20,0:19:54.19:3165,54,0	0/0:20,0:20:60.18:0,60,3001	0/0:24,0:24:72.25:0,72,4033	0/0:10,0:10:27.09:0,27,1385	0/0:50,0:50:99:0,151,8355	0/0:26,0:26:75.24:0,75,3981	0/0:35,0:35:99:0,99,5307	0/0:34,0:34:99:0,102,5539	0/0:23,0:23:66.23:0,66,3636	0/0:26,0:26:78.21:0,78,3850	0/0:25,0:25:69.24:0,69,3676	1/1:12,3:15:33.11:2139,33,0	1/1:2,6:8:18.06:1580,18,0	1/1:15,6:21:24.04:1297,24,0	0/0:24,0:24:72.25:0,72,3931	0/0:6,0:6:18.06:0,18,946	0/0:34,0:34:99:0,99,5462	0/0:17,0:17:51.17:0,51,2714	0/0:18,0:18:51.17:0,51,2608	1/1:8,3:11:30.10:2263,30,0	0/0:10,0:10:27.09:0,27,1471
chr10	83775224	.	A	AT	464.24	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.241;DP=558;FS=14.427;HRun=0;HaplotypeScore=72.7718;InbreedingCoeff=0.9287;MQ=68.41;MQ0=0;MQRankSum=-5.661;QD=14.51;ReadPosRankSum=-0.843;VQSLOD=3.9772;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1426	0/0:13,0:13:39.13:0,39,536	0/0:5,0:5:12.04:0,12,157	0/0:11,0:11:21.52:0,22,256	0/0:17,0:17:45.12:0,45,629	0/0:18,0:18:54.12:0,54,714	0/0:44,0:44:99:0,132,1807	1/1:1,3:4:8.94:105,9,0	0/0:20,0:20:57.19:0,57,793	0/0:25,0:25:75.25:0,75,1047	0/0:11,0:11:29.87:0,30,385	0/0:51,0:51:99:0,154,2133	0/0:25,0:25:75.25:0,75,1038	0/0:35,0:35:99:0,105,1459	0/0:34,0:34:99:0,102,1422	0/0:22,0:22:66.20:0,66,904	0/0:25,0:25:75.22:0,75,1029	0/0:24,0:24:72.21:0,72,980	1/1:1,3:4:5.92:64,6,0	1/1:1,6:7:14.45:168,14,0	1/1:4,6:10:8.85:87,9,0	0/0:24,0:24:72.24:0,72,1003	0/0:6,0:6:18.06:0,18,252	0/0:36,0:36:99:0,108,1489	0/0:18,0:18:54.16:0,54,736	0/0:19,0:19:54.01:0,54,719	1/1:2,4:7:18.04:200,18,0	0/0:9,0:9:27.09:0,27,377
chr10	83775502	.	T	TG	5942.80	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.120;DP=685;FS=9.219;HRun=1;HaplotypeScore=74.3676;InbreedingCoeff=0.9961;MQ=79.92;MQ0=0;MQRankSum=-2.911;QD=42.75;ReadPosRankSum=-2.220;VQSLOD=3.7757;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,165,2107	0/0:13,0:13:39.13:0,39,501	0/0:20,0:20:48.13:0,48,606	0/0:17,0:17:47.89:0,48,557	0/0:20,0:20:60.19:0,60,775	0/0:19,0:19:57.18:0,57,736	0/0:34,0:34:99:0,99,1283	1/1:1,16:17:51.17:758,51,0	0/0:23,0:23:66.19:0,66,828	0/0:32,0:32:90.28:0,90,1146	0/0:13,0:13:39.13:0,39,506	0/0:21,0:21:63.19:0,63,804	0/0:28,0:28:84.26:0,84,1076	0/0:27,0:27:72.23:0,72,934	0/0:24,0:24:69.22:0,69,892	0/0:13,0:13:39.13:0,39,506	0/0:31,0:31:93.30:0,93,1205	0/0:32,0:32:84.25:0,84,1075	1/1:1,20:21:63.20:915,63,0	1/1:0,16:16:48.16:719,48,0	1/1:3,66:69:99:2922,196,0	0/0:25,0:25:72.23:0,72,935	0/0:10,0:10:30.10:0,30,390	0/0:40,0:40:99:0,114,1465	0/0:17,0:17:51.17:0,51,662	0/0:23,0:23:69.22:0,69,895	1/1:0,16:16:42.14:629,42,0	0/0:6,0:6:15.05:0,15,195
chr10	83775932	.	AAAG	A	3493.93	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.119;DP=601;FS=5.335;HRun=0;HaplotypeScore=104.8228;InbreedingCoeff=0.9924;MQ=71.66;MQ0=0;MQRankSum=-11.807;QD=36.02;ReadPosRankSum=-2.208;VQSLOD=3.9266;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.31:0,90,2023	0/0:9,0:9:27.09:0,27,611	0/0:23,0:23:59.96:0,60,1230	0/0:19,0:19:51.71:0,52,916	0/0:20,0:20:57.20:0,57,1292	0/0:14,0:14:36.12:0,36,791	0/0:29,0:29:84.27:0,84,1856	1/1:1,27:28:81.26:1319,81,0	0/0:27,0:27:75.24:0,75,1638	0/0:22,0:22:63.22:0,63,1425	0/0:17,0:17:45.15:0,45,1011	0/0:19,0:19:51.17:0,51,1156	0/0:12,0:12:36.12:0,36,788	0/0:19,0:19:57.20:0,57,1283	0/0:21,0:21:60.19:0,60,1309	0/0:26,0:26:78.27:0,78,1733	0/0:40,0:40:99:0,114,2573	0/0:26,0:26:75.26:0,75,1681	1/1:3,14:17:39.13:649,39,0	1/1:2,15:17:39:559,39,0	1/1:0,17:17:12:170,12,0	0/0:20,0:20:57.20:0,57,1284	0/0:17,0:17:48.16:0,48,1088	0/0:27,0:27:81.28:0,81,1835	0/0:22,0:22:66.20:0,66,1421	0/0:29,0:29:81.27:0,81,1770	1/1:1,17:18:48.16:798,48,0	0/0:13,0:13:39.13:0,39,884
chr10	83776471	.	AACATACAT	A	1525.97	PASS	AC=14;AF=0.269;AN=52;BaseQRankSum=6.809;DP=664;FS=2.261;HRun=0;HaplotypeScore=160.2155;InbreedingCoeff=0.9513;MQ=57.42;MQ0=11;MQRankSum=-3.593;QD=9.72;ReadPosRankSum=-1.575;VQSLOD=2.4006;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:28:26.93:0,27,243	0/0:12,0:12:30.10:0,30,926	./.	./.	0/0:28,0:28:45.15:0,45,1509	0/0:27,0:27:42.13:0,42,1482	0/0:18,0:18:24.07:0,24,766	1/1:33,0:29:8.94:65,9,0	0/0:27,0:27:60.21:0,60,2107	0/0:34,0:36:81.24:0,81,2319	0/0:17,0:17:33.10:0,33,1119	0/0:21,0:21:42.10:0,42,1293	0/0:15,0:15:30.09:0,30,957	0/0:29,0:30:65.59:0,66,2191	0/0:34,0:34:72.23:0,72,2277	0/0:33,0:33:63.22:0,63,2176	0/0:27,0:27:57.20:0,57,1945	1/1:16,9:25:5.98:95,6,0	1/1:14,9:20:26.61:467,27,0	1/1:4,9:13:24.04:535,24,0	1/1:23,0:23:11.98:144,12,0	0/0:17,0:16:30.09:0,30,952	0/0:14,0:14:24.08:0,24,889	0/0:27,0:27:42.13:0,42,1387	1/1:6,0:19:15.59:104,16,0	0/0:10,0:27:49.97:0,50,428	1/1:9,12:21:12.04:299,12,0	0/0:2,0:11:20.95:0,21,171
chr10	83776755	.	C	CCAG	4922	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=1.999;DP=511;FS=0.897;HRun=0;HaplotypeScore=72.9650;InbreedingCoeff=0.9501;MQ=67.78;MQ0=0;MQRankSum=-2.838;QD=42.07;ReadPosRankSum=-2.965;VQSLOD=5.1692;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1582	0/0:6,0:6:18.03:0,18,254	0/0:17,0:16:48.02:0,48,706	0/0:11,0:11:24.56:0,25,387	0/0:26,0:26:66.20:0,66,1062	0/0:23,0:23:63.20:0,63,1041	0/0:9,0:9:18.05:0,18,282	1/1:2,34:38:99:1794,108,0	0/0:14,0:14:42.11:0,42,639	0/0:22,0:22:57.04:0,57,791	0/0:15,0:15:45.08:0,45,678	0/0:14,0:14:42.14:0,42,691	0/0:10,0:10:30.09:0,30,486	0/0:13,0:13:39.12:0,39,615	0/0:17,0:17:51.16:0,51,817	0/0:20,0:20:57.19:0,57,963	0/0:28,0:28:84.25:0,84,1365	0/0:22,0:21:57.19:0,57,966	1/1:2,17:20:54.03:952,54,0	1/1:1,19:20:42.14:902,42,0	1/1:2,8:10:3.01:69,3,0	0/0:5,0:5:15.05:0,15,256	0/0:10,0:10:30.08:0,30,477	0/0:14,0:14:39.07:0,39,576	0/0:25,0:25:75.21:0,75,1197	0/0:30,0:30:90.28:0,90,1461	1/1:0,29:28:57.12:1204,57,0	0/0:10,0:10:30.09:0,30,485
chr10	83777154	.	T	TAA	590.68	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.127;DP=419;FS=3.242;HRun=8;HaplotypeScore=62.0891;InbreedingCoeff=0.8275;MQ=71.47;MQ0=2;MQRankSum=-5.556;QD=14.77;ReadPosRankSum=-1.337;VQSLOD=0.7180;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,1121	0/0:3,0:3:9.02:0,9,100	0/0:18,0:16:3.71:0,4,251	0/0:12,0:12:14.99:0,15,167	0/0:10,0:10:30.08:0,30,334	0/0:18,0:18:45.09:0,45,490	0/0:15,0:15:36.07:0,36,391	1/1:9,1:10:3.01:48,3,0	0/0:17,0:17:45.12:0,45,502	0/0:12,0:12:33.09:0,33,367	0/0:17,0:17:45.10:0,45,501	0/0:17,0:17:42.06:0,42,450	0/0:15,0:15:42.11:0,42,468	0/0:26,0:26:66.07:0,66,718	0/0:12,0:12:27.07:0,27,301	0/0:11,0:12:20.99:0,21,292	0/0:29,0:29:72.02:0,72,753	0/0:23,0:22:54.60:0,55,603	1/1:9,3:12:21.03:274,21,0	1/1:0,8:8:24.03:307,24,0	1/1:5,2:5:3.48:45,3,0	0/0:17,0:17:39.08:0,39,435	0/0:4,0:4:12.03:0,12,133	0/0:28,0:27:68.77:0,69,758	0/0:7,0:7:21.06:0,21,234	0/0:21,0:21:54.12:0,54,584	1/1:0,3:2:5.98:68,6,0	0/0:7,0:8:23.80:0,24,246
chr10	83777320	.	CTAAA	C	632.32	PASS	AC=12;AF=0.333;AN=36;BaseQRankSum=3.509;DP=258;FS=6.185;HRun=0;HaplotypeScore=42.7824;InbreedingCoeff=0.5394;MQ=48.35;MQ0=23;MQRankSum=0.011;QD=9.30;ReadPosRankSum=0.454;VQSLOD=1.1797;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:3.01:0,3,34	1/1:3,1:4:3.01:47,3,0	./.	./.	0/0:13,0:13:9.03:0,9,213	0/0:15,0:15:21.07:0,21,498	0/0:5,0:5:3.01:0,3,71	1/1:14,0:9:1.25:3,1,0	0/0:11,0:10:12.04:0,12,285	1/1:7,3:10:9.03:141,9,0	1/1:6,2:9:6.02:94,6,0	./.	0/0:5,0:5:3.01:0,3,71	0/0:9,0:8:6.02:0,6,141	1/1:3,2:5:3.01:47,3,0	./.	1/1:16,10:22:27.09:424,27,0	0/0:11,0:10:6.02:0,6,105	./.	./.	./.	./.	./.	0/0:8,0:8:3.01:0,3,70	0/0:14,0:20:15.03:0,15,208	0/0:9,0:9:3.01:0,3,59	./.	0/0:9,0:9:6.02:0,6,111
chr10	83777556	.	TTA	T	3902.95	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.068;DP=410;FS=10.043;HRun=0;HaplotypeScore=61.4298;InbreedingCoeff=0.9702;MQ=59.04;MQ0=3;MQRankSum=-4.314;QD=40.24;ReadPosRankSum=0.006;VQSLOD=4.7967;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.21:0,78,1430	0/0:8,0:8:24.08:0,24,475	0/0:10,0:8:21.02:0,21,326	0/0:13,0:9:24.06:0,24,416	0/0:20,0:20:60.17:0,60,1107	0/0:17,0:17:51.16:0,51,990	0/0:15,0:15:45.09:0,45,839	1/1:1,22:23:67.09:896,67,0	0/0:16,0:16:45.14:0,45,854	0/0:12,0:12:36.10:0,36,624	0/0:13,0:13:39.12:0,39,709	0/0:7,0:7:21.07:0,21,392	0/0:7,0:7:21.06:0,21,389	0/0:14,0:14:42.12:0,42,767	0/0:10,0:10:30.10:0,30,606	0/0:12,0:12:36.12:0,36,725	0/0:25,0:24:64.67:0,65,1093	0/0:22,0:22:63.12:0,63,1094	1/1:1,14:14:42.05:575,42,0	1/1:0,21:21:59.98:848,60,0	1/1:0,7:7:21.07:336,21,0	0/0:2,0:2:6.02:0,6,121	0/0:7,0:7:21.07:0,21,424	0/0:13,0:13:33.11:0,33,639	0/0:13,0:12:33.09:0,33,605	0/0:13,0:13:39.13:0,39,786	1/1:2,29:30:78.26:1248,78,0	0/0:16,0:16:42.14:0,42,818
chr10	83777915	.	A	ATTG	8028.41	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-15.025;DP=783;FS=0.356;HRun=0;HaplotypeScore=103.9914;InbreedingCoeff=0.9999;MQ=72.21;MQ0=0;MQRankSum=-2.433;QD=52.13;ReadPosRankSum=-2.344;VQSLOD=5.9391;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,147,2244	0/0:15,0:15:42.13:0,42,660	0/0:18,0:20:40.94:0,41,600	0/0:13,0:13:32.43:0,32,452	0/0:29,0:29:75.26:0,75,1225	0/0:26,0:26:75.26:0,75,1219	0/0:22,0:22:51.17:0,51,833	1/1:3,24:27:70.16:1578,70,0	0/0:31,0:31:93.32:0,93,1518	0/0:36,0:36:93.30:0,93,1477	0/0:24,0:24:63.20:0,63,1005	0/0:24,0:24:72.23:0,72,1151	0/0:38,0:38:99:0,99,1615	0/0:24,0:24:66.23:0,66,1078	0/0:33,0:32:81.28:0,81,1322	0/0:23,0:23:69.24:0,69,1126	0/0:38,0:38:99:0,105,1662	0/0:31,0:31:87.30:0,87,1417	1/1:6,17:25:60.18:1180,60,0	1/1:2,25:28:69.13:1385,69,0	1/1:3,46:50:99:2412,108,0	0/0:26,0:26:78.25:0,78,1248	0/0:14,0:14:42.14:0,42,686	0/0:32,0:32:96.27:0,96,1514	0/0:18,0:18:54.16:0,54,856	0/0:40,0:40:99:0,114,1779	1/1:0,23:23:66.23:1473,66,0	0/0:23,0:23:63.22:0,63,1029
chr10	83780032	.	G	GCAGC	6304.28	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-6.884;DP=556;FS=0.000;HRun=0;HaplotypeScore=81.9641;InbreedingCoeff=0.9892;MQ=56.31;MQ0=9;MQRankSum=-6.560;QD=50.43;ReadPosRankSum=-3.606;VQSLOD=4.2168;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,2298	0/0:4,0:4:12.04:0,12,228	0/0:23,0:16:42.14:0,42,794	0/0:29,0:20:55.74:0,56,997	0/0:16,0:16:45.15:0,45,849	0/0:13,0:13:36.08:0,36,615	0/0:19,0:19:57.20:0,57,1081	1/1:19,19:40:99:2558,102,0	0/0:26,0:26:72.25:0,72,1365	0/0:16,0:15:39.13:0,39,740	0/0:13,0:13:39.13:0,39,741	0/0:23,0:23:63.22:0,63,1195	0/0:14,0:14:42.14:0,42,796	0/0:15,0:15:45.15:0,45,854	0/0:17,0:17:51.17:0,51,949	0/0:23,0:23:69.22:0,69,1278	0/0:33,0:33:96.30:0,96,1788	0/0:22,0:22:66.20:0,66,1199	1/1:13,7:16:45.14:1037,45,0	1/1:2,9:11:17.83:483,18,0	1/1:3,19:27:39.13:1052,39,0	0/0:8,0:8:21.07:0,21,398	0/0:10,0:10:30.10:0,30,570	0/0:24,0:24:66.23:0,66,1253	0/0:13,0:13:39.13:0,39,741	0/0:15,0:15:42.14:0,42,796	1/1:7,15:25:45.13:1174,45,0	0/0:11,0:11:24.08:0,24,455
chr10	83780432	.	TG	T	948.87	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.670;DP=552;FS=3.445;HRun=5;HaplotypeScore=53.4260;InbreedingCoeff=0.9888;MQ=71.92;MQ0=0;MQRankSum=-4.054;QD=23.72;ReadPosRankSum=2.305;VQSLOD=2.6854;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,39:40:87.27:1044,87,0	0/0:13,0:13:36.11:0,36,486	0/0:11,0:11:33.10:0,33,428	0/0:17,0:15:45.06:0,45,561	0/0:11,0:11:26.86:0,27,338	0/0:16,0:16:48.16:0,48,672	0/0:19,0:19:51.15:0,51,695	0/0:26,0:25:69.18:0,69,943	0/0:17,0:17:51.17:0,51,700	0/0:20,0:20:57.19:0,57,795	0/0:8,0:8:21.07:0,21,294	0/0:30,0:30:87.29:0,87,1206	0/0:16,0:16:45.15:0,45,622	0/0:21,0:21:60.19:0,60,822	0/0:25,0:25:72.24:0,72,991	0/0:13,0:13:39.13:0,39,545	0/0:47,0:47:99:0,135,1869	0/0:12,0:12:36.12:0,36,504	0/0:18,0:18:51.17:0,51,713	0/0:13,0:13:30.10:0,30,406	0/0:47,0:47:99:0,141,1926	0/0:10,0:10:30.10:0,30,419	0/0:10,0:10:30.09:0,30,400	0/0:28,0:28:81.26:0,81,1110	0/0:17,0:17:48.16:0,48,672	0/0:24,0:24:72.23:0,72,984	0/0:15,0:15:45.15:0,45,630	0/0:8,0:8:21.07:0,21,294
chr10	83780738	.	TGTC	T	1003.75	PASS	AB=0.957;AC=6;AF=0.107;AN=56;BaseQRankSum=12.092;DP=668;FS=8.936;HRun=0;HaplotypeScore=129.3151;InbreedingCoeff=0.3226;MQ=86.07;MQ0=0;MQRankSum=-2.468;QD=7.02;ReadPosRankSum=-1.258;VQSLOD=2.3223;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,163,3593	0/0:14,0:14:39.13:0,39,874	0/0:20,0:20:47.93:0,48,1131	0/0:27,0:26:69.07:0,69,1466	0/0:11,0:11:33.11:0,33,743	0/0:21,0:21:63.20:0,63,1383	0/0:38,0:38:99:0,111,2467	0/1:26,1:27:40.11:169,0,40	0/0:21,0:21:63.22:0,63,1422	0/0:27,0:27:78.13:0,78,1708	0/0:13,0:13:36.12:0,36,808	0/0:26,0:26:75.17:0,75,1599	0/0:15,0:15:42.14:0,42,951	0/0:24,0:24:66.21:0,66,1451	0/0:11,0:11:30.10:0,30,661	0/0:18,0:18:48.16:0,48,1060	0/0:27,0:27:78.74:0,79,1742	0/0:18,0:18:54.14:0,54,1167	0/1:19,2:21:5.05:303,0,5	0/1:14,0:14:25.46:54,0,25	1/1:62,0:62:64.08:492,64,0	0/0:18,0:18:48.16:0,48,1085	0/0:18,0:18:48.16:0,48,1086	0/0:31,0:31:90.31:0,90,2014	0/0:27,0:27:75.20:0,75,1606	0/0:29,0:29:87.30:0,87,1969	0/1:18,1:18:27.22:116,0,27	0/0:17,0:17:51.13:0,51,1106
chr10	83781401	.	T	TACAC	1434.45	PASS	AB=0.819;AC=17;AF=0.327;AN=52;BaseQRankSum=-0.432;DP=604;FS=4.985;HRun=0;HaplotypeScore=118.1115;InbreedingCoeff=0.4893;MQ=69.07;MQ0=7;MQRankSum=-0.090;QD=6.86;ReadPosRankSum=-2.748;VQSLOD=1.8574;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:38:3:0,3,27	1/1:4,1:7:8.54:150,9,0	./.	./.	0/0:20,0:22:24.02:0,24,268	0/0:22,0:23:1.21:0,1,152	1/1:19,1:26:6.02:122,6,0	0/0:21,0:21:0.43:0,0,1	0/0:26,0:29:29.96:0,30,442	1/1:15,3:18:19.86:351,20,0	1/1:12,2:13:6.02:140,6,0	0/0:14,0:14:8.91:0,9,138	0/0:13,0:14:14.93:0,15,230	0/0:13,0:13:11.83:0,12,181	1/1:13,8:23:6.02:140,6,0	0/1:12,0:17:27.78:28,0,75	1/1:20,9:33:13.62:422,14,0	0/1:17,0:27:71.01:82,0,71	0/0:19,0:20:2.13:0,2,26	0/0:17,0:22:24.17:0,24,208	0/0:30,0:29:9.02:0,9,133	0/0:12,0:13:15.94:0,16,232	0/0:16,0:16:15.05:0,15,230	0/0:38,0:41:51.16:0,51,755	1/1:18,4:23:8.86:154,9,0	0/1:17,0:17:13.99:14,0,137	0/0:8,0:16:9.01:0,9,84	0/0:7,0:7:3.01:0,3,46
chr10	83781489	.	CAGTT	C	4700.38	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.198;DP=610;FS=4.660;HRun=0;HaplotypeScore=114.2751;InbreedingCoeff=0.9994;MQ=82.37;MQ0=0;MQRankSum=-6.591;QD=41.60;ReadPosRankSum=1.274;VQSLOD=5.2658;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:96.33:0,96,2503	0/0:10,0:10:30.10:0,30,810	0/0:22,0:21:60.21:0,60,1561	0/0:22,0:22:45.17:0,45,1330	0/0:18,0:18:51.18:0,51,1349	0/0:16,0:16:45.15:0,45,1176	0/0:18,0:18:51.16:0,51,1319	1/1:4,18:23:57.19:1073,57,0	0/0:25,0:25:69.24:0,69,1836	0/0:22,0:22:66.23:0,66,1750	0/0:20,0:20:54.19:0,54,1450	0/0:22,0:22:66.23:0,66,1780	0/0:16,0:16:45.14:0,45,1160	0/0:27,0:27:78.27:0,78,2105	0/0:23,0:23:63.22:0,63,1669	0/0:11,0:11:33.11:0,33,881	0/0:34,0:34:93.32:0,93,2500	0/0:19,0:19:51.18:0,51,1310	1/1:3,12:15:36.12:663,36,0	1/1:4,16:20:33.11:626,33,0	1/1:2,36:38:88.54:1655,89,0	0/0:22,0:22:66.23:0,66,1781	0/0:15,0:15:45.15:0,45,1150	0/0:42,0:41:99:0,111,2919	0/0:23,0:23:69.23:0,69,1802	0/0:21,0:21:60.21:0,60,1567	1/1:1,16:17:36.12:683,36,0	0/0:9,0:9:27.08:0,27,671
chr10	83782046	.	C	CG	4522.32	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.234;DP=645;FS=11.422;HRun=2;HaplotypeScore=79.2225;InbreedingCoeff=0.9997;MQ=84.11;MQ0=0;MQRankSum=-0.168;QD=34.26;ReadPosRankSum=-4.162;VQSLOD=2.4594;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1362	0/0:17,0:17:48.16:0,48,622	0/0:23,0:23:59.20:0,59,703	0/0:21,0:21:39.51:0,40,448	0/0:14,0:14:39.13:0,39,506	0/0:27,0:27:78.24:0,78,995	0/0:25,0:25:69.21:0,69,882	1/1:5,32:37:93.19:1206,93,0	0/0:23,0:23:69.21:0,69,880	0/0:17,0:17:42.13:0,42,535	0/0:20,0:20:54.18:0,54,701	0/0:26,0:26:78.24:0,78,997	0/0:16,0:16:39.13:0,39,505	0/0:22,0:22:60.18:0,60,764	0/0:28,0:28:81.26:0,81,1051	0/0:17,0:17:51.17:0,51,662	0/0:35,0:35:99:0,102,1301	0/0:35,0:35:99:0,99,1278	1/1:4,13:17:42.12:601,42,0	1/1:4,10:14:32.90:385,33,0	1/1:3,33:36:87.22:1283,87,0	0/0:19,0:19:54.18:0,54,700	0/0:10,0:10:30.07:0,30,360	0/0:26,0:26:75.23:0,75,956	0/0:20,0:20:60.17:0,60,749	0/0:21,0:21:60.17:0,60,744	1/1:2,26:28:72.16:1046,72,0	0/0:15,0:15:42.14:0,42,545
chr10	83782244	.	G	GCTTTCT	8023.37	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-2.101;DP=626;FS=12.575;HRun=0;HaplotypeScore=129.3294;InbreedingCoeff=0.9985;MQ=79.07;MQ0=0;MQRankSum=-12.902;QD=79.44;ReadPosRankSum=-2.739;VQSLOD=5.0420;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,2670	0/0:8,0:8:24.08:0,24,547	0/0:20,0:20:48.14:0,48,1008	0/0:15,0:15:42.14:0,42,952	0/0:16,0:16:45.15:0,45,1008	0/0:15,0:15:45.15:0,45,1027	0/0:31,0:31:84.29:0,84,1880	1/1:12,9:22:63.22:2042,63,0	0/0:30,0:30:84.29:0,84,1899	0/0:22,0:22:57.19:0,57,1222	0/0:16,0:16:39.13:0,39,890	0/0:32,0:32:90.31:0,90,2037	0/0:20,0:20:57.18:0,57,1258	0/0:19,0:19:54.19:0,54,1233	0/0:28,0:28:81.28:0,81,1851	0/0:19,0:19:57.20:0,57,1301	0/0:39,0:39:99:0,99,2238	0/0:29,0:29:67.78:0,68,1491	1/1:10,10:20:51.14:1604,51,0	1/1:2,17:21:54.19:1784,54,0	1/1:8,5:14:20.98:718,21,0	0/0:15,0:15:36.12:0,36,823	0/0:22,0:22:60.21:0,60,1368	0/0:21,0:21:57.16:0,57,1148	0/0:26,0:26:72.24:0,72,1563	0/0:22,0:22:60.19:0,60,1272	1/1:3,20:24:54.19:1877,54,0	0/0:18,0:18:54.14:0,54,1142
chr10	83782814	.	GA	G	4262.38	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.149;DP=497;FS=66.551;HRun=3;HaplotypeScore=74.5270;InbreedingCoeff=0.9557;MQ=91.59;MQ0=0;MQRankSum=-1.995;QD=35.52;ReadPosRankSum=-1.669;VQSLOD=-0.6344;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.22:0,72,993	0/0:5,0:5:15.05:0,15,216	0/0:21,0:21:53.94:0,54,686	0/0:29,0:29:81.24:0,81,1102	0/0:11,0:11:27.09:0,27,389	0/0:8,0:8:24.05:0,24,323	0/0:27,0:27:78.26:0,78,1121	1/1:0,20:20:60.19:743,60,0	0/0:17,0:17:51.14:0,51,712	0/0:16,0:16:42.14:0,42,590	0/0:11,0:11:33.11:0,33,475	0/0:15,0:15:42.14:0,42,605	0/0:10,0:10:30.07:0,30,410	0/0:17,0:17:51.17:0,51,734	0/0:20,0:20:57.14:0,57,780	0/0:10,0:10:27.09:0,27,389	0/0:21,0:21:60.20:0,60,864	0/0:21,0:21:60.20:0,60,839	1/1:0,17:17:51.15:622,51,0	1/1:0,10:10:30.09:372,30,0	1/1:1,59:60:99:2044,166,0	0/0:16,0:16:48.16:0,48,691	0/0:12,0:12:36.08:0,36,494	0/0:33,0:33:90.29:0,90,1274	0/0:14,0:14:42.14:0,42,588	0/0:15,0:15:45.15:0,45,630	1/1:0,13:13:39.12:483,39,0	0/0:1,0:1:3.01:0,3,42
chr10	83782929	.	GC	G	199.45	PASS	AC=10;AF=0.238;AN=42;BaseQRankSum=-1.557;DP=104;FS=97.535;HRun=1;HaplotypeScore=42.1014;InbreedingCoeff=0.5791;MQ=38.92;MQ0=0;MQRankSum=-0.580;QD=6.23;ReadPosRankSum=-0.825;VQSLOD=-0.6039;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:5.81:0,6,35	./.	./.	./.	./.	0/0:1,0:1:2.80:0,3,13	0/0:14,0:14:27.11:0,27,147	1/1:2,2:4:5.56:30,6,0	./.	0/0:2,0:2:5.86:0,6,39	0/0:1,0:1:2.84:0,3,14	0/0:2,0:2:5.60:0,6,26	0/0:3,0:3:5.77:0,6,33	0/0:5,0:5:2.74:0,3,12	0/0:2,0:2:5.80:0,6,38	0/0:5,0:5:11.65:0,12,69	0/0:6,0:6:15.15:0,15,100	0/0:6,0:6:11.52:0,12,61	1/1:6,1:7:17.43:108,17,0	./.	1/1:11,3:14:10.14:62,10,0	0/0:1,0:1:0.47:0,0,1	0/0:2,0:2:5.64:0,6,27	0/0:8,0:8:8.84:0,9,58	1/1:1,0:1:2.90:16,3,0	0/0:2,0:2:1.55:0,2,4	1/1:5,1:6:17.77:118,18,0	./.
chr10	83782935	.	G	GGGGC	898.81	PASS	AB=1.000;AC=27;AF=0.750;AN=36;BaseQRankSum=-3.723;DP=81;FS=40.264;HRun=0;HaplotypeScore=36.9974;InbreedingCoeff=0.3405;MQ=41.22;MQ0=0;MQRankSum=1.204;QD=19.12;ReadPosRankSum=-0.532;VQSLOD=1.4859;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:4:3.01:49,3,0	./.	./.	./.	./.	./.	1/1:2,6:8:2.56:64,3,0	0/0:3,0:3:2.60:0,3,10	./.	1/1:0,2:2:6.02:122,6,0	./.	./.	1/1:0,2:2:3.01:73,3,0	1/1:0,3:3:3.01:48,3,0	1/1:1,0:1:3.01:32,3,0	1/1:0,4:4:9.03:204,9,0	1/1:3,2:5:14.26:169,14,0	1/1:4,2:6:3:62,3,0	0/0:5,0:5:1.77:0,2,3	0/1:3,0:3:0:0,0,0	0/0:14,0:14:2.78:0,3,13	1/1:1,0:1:0.47:1,0,0	./.	1/1:4,1:5:6.32:81,6,0	1/1:0,1:1:3.01:30,3,0	1/1:1,1:2:3.01:65,3,0	0/0:3,0:3:5.24:0,5,20	./.
chr10	83783489	.	CT	C	4909.65	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.987;DP=782;FS=6.775;HRun=2;HaplotypeScore=73.8951;InbreedingCoeff=0.9990;MQ=84.52;MQ0=0;MQRankSum=-5.149;QD=34.33;ReadPosRankSum=-0.717;VQSLOD=4.6111;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,150,2108	0/0:8,0:8:24.08:0,24,350	0/0:32,0:32:72.42:0,72,1134	0/0:27,0:27:75.14:0,75,991	0/0:20,0:20:60.15:0,60,800	0/0:29,0:29:84.23:0,84,1152	0/0:29,0:29:84.27:0,84,1204	1/1:1,36:37:99:1345,108,0	0/0:38,0:38:99:0,111,1599	0/0:34,0:34:99:0,102,1462	0/0:10,0:10:30.09:0,30,419	0/0:42,0:42:99:0,123,1720	0/0:28,0:28:81.22:0,81,1123	0/0:31,0:31:93.30:0,93,1335	0/0:46,0:46:99:0,138,1912	0/0:25,0:25:75.24:0,75,1062	0/0:41,0:41:99:0,111,1541	0/0:25,0:25:75.18:0,75,1049	1/1:1,21:22:63.18:790,63,0	1/1:0,12:12:30.03:366,30,0	1/1:0,51:51:99:1787,138,0	0/0:28,0:28:81.10:0,81,1058	0/0:13,0:13:36.12:0,36,526	0/0:30,0:30:87.28:0,87,1250	0/0:17,0:17:51.17:0,51,741	0/0:27,0:27:81.24:0,81,1107	1/1:1,20:21:48.16:621,48,0	0/0:9,0:8:27.09:0,27,393
chr10	83783744	.	C	CGT	1119.75	PASS	AB=0.910;AC=27;AF=0.540;AN=50;BaseQRankSum=1.846;DP=555;FS=0.000;HRun=0;HaplotypeScore=114.5685;InbreedingCoeff=0.2489;MQ=63.12;MQ0=6;MQRankSum=-1.570;QD=3.13;ReadPosRankSum=-2.690;VQSLOD=1.3989;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:27:3:25,3,0	./.	./.	./.	0/0:8,0:9:3.72:0,4,16	0/1:9,0:9:18.46:18,0,27	0/0:25,0:35:22.73:0,23,111	1/1:10,0:10:1.25:3,1,0	0/0:24,0:29:11.16:0,11,71	0/0:22,0:22:3:0,3,32	0/0:4,0:4:0:0,0,0	0/0:24,0:24:3:0,3,32	0/1:14,0:14:0:0,0,0	0/1:20,0:21:6.29:6,0,8	0/1:19,0:20:5.15:40,0,5	0/1:7,6:13:17.34:163,0,17	0/1:18,14:33:20.38:121,0,20	1/1:17,0:17:2.61:70,3,0	1/1:19,0:18:8.22:52,8,0	1/1:10,0:10:5.69:37,6,0	1/1:62,0:62:25.15:170,25,0	0/0:11,0:11:3:0,3,32	0/0:6,0:5:9.02:0,9,97	0/1:35,0:35:35.13:35,0,56	1/1:19,0:18:6.43:29,6,0	1/1:19,0:19:32.30:252,32,0	1/1:17,0:17:17.97:183,18,0	1/1:12,0:11:8.79:65,9,0
chr10	83784262	.	GTTTTTT	G	2458.42	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.370;DP=556;FS=0.463;HRun=8;HaplotypeScore=152.1123;InbreedingCoeff=0.9950;MQ=59.74;MQ0=5;MQRankSum=-9.753;QD=31.52;ReadPosRankSum=-0.233;VQSLOD=0.0346;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,3002	0/0:7,0:7:21.07:0,21,550	0/0:29,0:12:20.15:0,20,495	0/0:28,0:17:38.59:0,39,977	0/0:21,0:21:63.21:0,63,2028	0/0:18,0:18:51.17:0,51,1638	0/0:25,0:25:66.23:0,66,2083	1/1:11,4:18:44.77:483,45,0	0/0:20,0:20:51.17:0,51,1704	0/0:20,0:18:51.15:0,51,1319	0/0:17,0:17:45.15:0,45,1454	0/0:19,0:19:57.19:0,57,1645	0/0:7,0:7:21.06:0,21,487	0/0:26,0:26:72.25:0,72,2225	0/0:11,0:11:27.09:0,27,914	0/0:24,0:25:66.23:0,66,2233	0/0:36,0:36:96.28:0,96,2988	0/0:25,0:24:66.21:0,66,2077	1/1:2,4:9:26.78:320,27,0	1/1:2,18:24:71.74:1069,72,0	1/1:3,2:12:24.21:214,24,0	0/0:22,0:22:66.23:0,66,2137	0/0:23,0:23:61.09:0,61,1807	0/0:18,0:18:54.14:0,54,1809	0/0:16,0:16:39.08:0,39,1088	0/0:20,0:20:57.19:0,57,1805	1/1:0,8:15:41.60:547,42,0	0/0:8,0:7:21.07:0,21,690
chr10	83784271	.	GTTTT	G	1199.18	PASS	AB=0.694;AC=7;AF=0.125;AN=56;BaseQRankSum=10.867;DP=567;FS=12.127;HRun=8;HaplotypeScore=140.8863;InbreedingCoeff=0.6288;MQ=58.56;MQ0=5;MQRankSum=-9.468;QD=16.21;ReadPosRankSum=1.775;VQSLOD=0.1646;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:93.28:0,93,2202	0/0:9,0:9:27.08:0,27,559	0/0:29,0:12:30.02:0,30,453	0/0:27,0:16:38.01:0,38,794	0/0:22,0:22:66.22:0,66,1555	0/0:16,0:16:48.16:0,48,1195	0/0:27,0:27:80.75:0,81,1749	1/1:5,4:13:5.73:215,6,0	0/0:22,0:22:57.19:0,57,1404	0/0:16,0:14:39.13:0,39,848	0/0:18,0:18:48.15:0,48,1149	0/0:16,0:16:45.15:0,45,1121	0/0:8,0:8:24.03:0,24,422	0/0:25,0:25:66.19:0,66,1604	0/0:13,0:13:30.57:0,31,767	0/0:27,0:27:74.84:0,75,1817	0/0:40,0:40:99:0,102,2408	0/0:24,0:23:63.20:0,63,1541	0/1:5,4:9:16.37:158,0,16	1/1:4,18:23:20.45:575,20,0	0/1:9,2:14:0.11:126,0,0	0/0:23,0:23:69.14:0,69,1688	0/0:26,0:26:74.90:0,75,1615	0/0:21,0:21:60.21:0,60,1551	0/0:16,0:16:38.99:0,39,855	0/0:21,0:21:49.23:0,49,1284	0/1:7,8:15:4.05:261,0,4	0/0:8,0:7:21.06:0,21,503
chr10	83784278	.	G	GT	4414.25	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-5.109;DP=550;FS=0.374;HRun=10;HaplotypeScore=89.7318;InbreedingCoeff=0.8911;MQ=56.51;MQ0=6;MQRankSum=4.779;QD=16.29;ReadPosRankSum=0.399;VQSLOD=5.0385;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,2:36:74.33:407,74,0	1/1:2,6:8:18.05:192,18,0	0/0:29,0:10:17.93:0,18,142	0/0:25,0:16:17.94:0,18,179	0/0:24,0:25:54.97:0,55,427	0/0:18,0:18:41.31:0,41,328	1/1:11,19:30:29.53:519,30,0	0/0:0,0:8:5.45:0,5,20	0/0:21,0:21:56.94:0,57,468	1/1:7,10:16:32.91:313,33,0	1/1:4,13:18:5.32:246,5,0	0/0:13,1:15:5.97:0,6,240	0/0:8,0:8:17.94:0,18,144	0/0:22,0:22:19.12:0,19,319	1/1:1,13:14:30.08:320,30,0	1/1:1,27:29:69.01:718,69,0	1/1:4,40:44:43.95:878,44,0	1/1:7,0:22:18.34:176,18,0	0/0:1,0:6:0.90:0,1,16	0/0:1,0:20:34.40:0,34,105	1/1:3,0:7:5.19:28,5,0	0/0:24,0:24:59.88:0,60,486	0/0:25,1:26:18.80:0,19,359	0/0:21,1:22:24.94:0,25,411	1/1:2,13:16:33.03:339,33,0	1/1:6,4:21:33.92:203,34,0	0/0:0,0:8:16.30:0,16,50	1/1:3,1:6:11.60:75,12,0
chr10	83784280	.	T	TG	423.03	PASS	AB=0.994;AC=19;AF=0.339;AN=56;BaseQRankSum=7.963;DP=550;FS=6.748;HRun=0;HaplotypeScore=109.4209;InbreedingCoeff=0.4316;MQ=56.10;MQ0=6;MQRankSum=-2.056;QD=1.82;ReadPosRankSum=3.070;VQSLOD=1.8130;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:65.45:0,65,383	0/1:7,0:7:10.18:22,0,10	0/0:27,0:10:23.66:0,24,281	0/0:27,0:16:38.24:0,38,431	0/0:24,0:24:72.15:0,72,894	0/0:17,0:17:51.12:0,51,646	0/1:29,0:29:53.69:54,0,213	1/1:10,0:10:16.19:71,16,0	0/0:21,0:21:57.19:0,57,792	0/1:18,0:16:20.20:20,0,113	0/1:18,0:18:2.09:2,0,155	0/0:14,0:14:36.63:0,37,501	0/0:7,0:7:21.06:0,21,276	0/0:22,0:22:54.61:0,55,690	1/1:14,0:14:15.12:46,15,0	0/1:30,0:30:31.81:51,0,32	0/1:44,0:44:64.56:115,0,65	0/0:23,0:22:55.05:0,55,343	1/1:7,1:8:9.43:59,9,0	0/1:22,1:23:4:4,0,17	1/1:6,2:8:19.03:103,19,0	0/0:23,0:23:69.21:0,69,907	0/0:25,0:25:60.17:0,60,778	0/0:21,0:21:54:0,54,774	1/1:15,0:15:16.32:51,16,0	0/0:22,0:22:42.91:0,43,354	1/1:9,0:9:1.09:7,1,0	0/0:7,0:6:11.49:0,11,93
chr10	83784299	.	G	GA	1360.09	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.003;DP=570;FS=3.549;HRun=1;HaplotypeScore=114.7209;InbreedingCoeff=0.9935;MQ=57.17;MQ0=9;MQRankSum=-11.960;QD=15.11;ReadPosRankSum=-3.868;VQSLOD=2.2886;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,99,1200	0/0:11,0:11:33.09:0,33,414	0/0:25,0:11:20.97:0,21,228	0/0:14,0:9:26.42:0,26,270	0/0:25,0:25:75.24:0,75,970	0/0:16,0:16:45.15:0,45,584	0/0:25,0:25:69.12:0,69,850	1/1:7,10:17:44.47:353,44,0	0/0:24,0:24:69.21:0,69,879	0/0:22,0:20:57.18:0,57,728	0/0:17,0:17:48.16:0,48,622	0/0:16,0:16:48.13:0,48,594	0/0:10,0:10:30.08:0,30,374	0/0:19,0:19:57.17:0,57,724	0/0:17,0:17:45.15:0,45,581	0/0:26,0:26:69.18:0,69,876	0/0:40,0:40:96.27:0,96,1223	0/0:20,0:20:54.17:0,54,694	1/1:5,10:15:44.21:360,44,0	1/1:5,24:29:66.82:473,67,0	1/1:8,7:15:19.90:121,20,0	0/0:22,0:22:63.17:0,63,780	0/0:24,0:23:69.14:0,69,857	0/0:28,0:28:81.26:0,81,1043	0/0:13,0:13:36.11:0,36,449	0/0:22,0:22:66.21:0,66,856	1/1:5,9:14:30.98:229,31,0	0/0:6,0:5:15.05:0,15,195
chr10	83784305	.	AC	A	870.53	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.949;DP=566;FS=1.666;HRun=3;HaplotypeScore=107.2094;InbreedingCoeff=0.9893;MQ=58.88;MQ0=9;MQRankSum=-9.683;QD=10.12;ReadPosRankSum=-4.355;VQSLOD=-0.0026;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:96.19:0,96,1290	0/0:12,0:12:36.12:0,36,517	0/0:24,0:11:26.20:0,26,298	0/0:16,0:12:32.76:0,33,346	0/0:26,0:26:78.23:0,78,1091	0/0:16,0:16:48.16:0,48,689	0/0:23,0:23:57.19:0,57,820	1/1:1,14:15:36.53:248,37,0	0/0:23,0:23:63.21:0,63,894	0/0:23,0:22:66.21:0,66,933	0/0:16,0:16:48.16:0,48,689	0/0:16,0:16:48.16:0,48,691	0/0:10,0:10:30.10:0,30,432	0/0:18,0:18:54.16:0,54,754	0/0:18,0:18:48.16:0,48,687	0/0:25,0:25:66.21:0,66,933	0/0:40,0:40:99:0,99,1419	0/0:19,0:19:48.16:0,48,687	1/1:7,9:16:36.03:246,36,0	1/1:3,23:26:50.22:288,50,0	1/1:8,7:15:12.85:92,13,0	0/0:20,0:20:57.19:0,57,818	0/0:26,0:25:75.23:0,75,1049	0/0:29,0:29:84.26:0,84,1168	0/0:14,0:14:36.11:0,36,498	0/0:21,0:21:60.20:0,60,862	1/1:6,8:14:25.39:171,25,0	0/0:6,0:5:15.05:0,15,212
chr10	83784970	.	T	TA	2928.51	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-6.050;DP=547;FS=4.173;HRun=3;HaplotypeScore=98.1609;InbreedingCoeff=0.9906;MQ=72.10;MQ0=0;MQRankSum=-3.978;QD=31.49;ReadPosRankSum=-2.140;VQSLOD=2.5797;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,1642	0/0:15,0:15:42.12:0,42,492	0/0:8,0:8:21.06:0,21,252	0/0:13,0:13:23.60:0,24,392	0/0:19,0:19:51.14:0,51,600	0/0:16,0:16:48.15:0,48,576	0/0:24,0:24:63.18:0,63,743	1/1:1,24:25:72.24:1008,72,0	0/0:14,0:14:42.13:0,42,504	0/0:28,0:28:81.24:0,81,962	0/0:11,0:11:33.10:0,33,396	0/0:24,0:24:66.20:0,66,792	0/0:16,0:16:42.13:0,42,502	0/0:20,0:20:54.15:0,54,636	0/0:19,0:19:57.17:0,57,684	0/0:16,0:16:48.15:0,48,575	0/0:31,0:31:84.26:0,84,1007	0/0:21,0:21:60.18:0,60,719	1/1:2,11:13:36.12:498,36,0	1/1:4,25:29:60.20:838,60,0	1/1:2,7:9:12:146,12,0	0/0:22,0:22:66.20:0,66,787	0/0:28,0:28:84.24:0,84,995	0/0:11,0:11:33.09:0,33,384	0/0:18,0:19:48.15:0,48,576	0/0:24,0:24:72.22:0,72,864	1/1:3,14:17:45.13:612,45,0	0/0:9,0:9:24.07:0,24,288
chr10	83785384	.	A	AT	4199.32	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.482;DP=612;FS=4.221;HRun=2;HaplotypeScore=65.0823;InbreedingCoeff=0.9997;MQ=91.80;MQ0=0;MQRankSum=-3.137;QD=37.16;ReadPosRankSum=-0.432;VQSLOD=4.0394;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1412	0/0:10,0:10:30.09:0,30,371	0/0:28,0:28:75.22:0,75,900	0/0:22,0:22:45.12:0,45,537	0/0:18,0:18:54.17:0,54,669	0/0:20,0:20:60.19:0,60,743	0/0:36,0:36:99:0,108,1338	1/1:4,18:22:57.12:762,57,0	0/0:22,0:22:63.12:0,63,737	0/0:20,0:20:60.17:0,60,716	0/0:15,0:15:45.14:0,45,557	0/0:11,0:11:33.10:0,33,409	0/0:26,0:26:75.22:0,75,915	0/0:14,0:14:42.13:0,42,520	0/0:20,0:20:57.18:0,57,707	0/0:25,0:25:75.24:0,75,930	0/0:20,0:20:60.19:0,60,741	0/0:25,0:25:72.19:0,72,876	1/1:2,15:17:45.14:630,45,0	1/1:2,26:28:75.20:1038,75,0	1/1:1,19:20:51.17:734,51,0	0/0:23,0:23:69.22:0,69,854	0/0:19,0:19:57.17:0,57,696	0/0:36,0:36:99:0,102,1239	0/0:16,0:16:48.15:0,48,595	0/0:21,0:21:60.16:0,60,710	1/1:2,24:26:72.24:1035,72,0	0/0:13,0:13:33.10:0,33,409
chr10	83786149	.	T	TTGTA	7596.64	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-2.342;DP=518;FS=3.107;HRun=0;HaplotypeScore=89.1285;InbreedingCoeff=0.9934;MQ=84.24;MQ0=0;MQRankSum=-6.847;QD=61.76;ReadPosRankSum=0.652;VQSLOD=6.3375;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,105,1884	0/0:6,0:6:18.06:0,18,336	0/0:17,0:17:35.78:0,36,516	0/0:20,0:20:41.19:0,41,879	0/0:20,0:20:57.20:0,57,1064	0/0:20,0:19:57.18:0,57,1032	0/0:20,0:20:60.21:0,60,1113	1/1:4,21:26:66.23:1722,66,0	0/0:13,0:13:33.11:0,33,609	0/0:11,0:11:30.10:0,30,532	0/0:12,0:12:30.10:0,30,560	0/0:12,0:12:36.12:0,36,659	0/0:15,0:15:45.15:0,45,834	0/0:19,0:19:57.20:0,57,1063	0/0:18,0:18:51.17:0,51,952	0/0:15,0:15:45.15:0,45,840	0/0:25,0:25:72.25:0,72,1344	0/0:33,0:33:96.33:0,96,1761	1/1:6,8:14:30.10:799,30,0	1/1:0,19:19:45.15:1198,45,0	1/1:9,35:44:99:2601,99,0	0/0:16,0:16:39.11:0,39,659	0/0:11,0:11:30.10:0,30,560	0/0:19,0:19:54.19:0,54,1001	0/0:18,0:18:48.15:0,48,858	0/0:10,0:10:24.08:0,24,448	1/1:4,16:20:48.16:1278,48,0	0/0:6,0:6:15.05:0,15,280
chr10	83786261	.	T	TC	2729.17	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-5.076;DP=375;FS=0.468;HRun=8;HaplotypeScore=64.5940;InbreedingCoeff=0.8568;MQ=83.78;MQ0=0;MQRankSum=0.738;QD=17.38;ReadPosRankSum=-1.071;VQSLOD=3.3269;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,5:22:24.28:156,24,0	1/1:1,6:7:12.02:127,12,0	0/0:13,0:13:26.97:0,27,237	0/0:15,0:15:12.29:0,12,207	0/0:19,0:19:42.01:0,42,384	0/0:12,0:12:30.01:0,30,275	1/1:0,17:17:45.13:519,45,0	0/0:7,0:7:4.07:0,4,12	0/0:15,0:15:32.97:0,33,294	1/1:1,10:11:27.08:312,27,0	1/1:2,11:14:2.52:263,3,0	0/0:14,0:14:39.02:0,39,357	0/0:16,1:17:7.44:0,7,322	0/0:11,0:11:33.01:0,33,297	1/1:4,9:13:21.06:242,21,0	1/1:1,13:14:30.09:346,30,0	1/1:5,29:34:66.41:726,66,0	1/1:11,0:12:22.15:93,22,0	0/0:8,0:8:6.11:0,6,18	0/0:15,0:15:16.30:0,16,48	0/0:10,0:10:4.07:0,4,12	0/0:16,0:16:42.02:0,42,384	0/0:10,0:10:24.01:0,24,220	0/0:24,0:24:57.01:0,57,521	1/1:4,0:4:2.51:7,3,0	1/1:2,1:6:10.30:81,10,0	0/0:12,0:12:14.73:0,15,43	1/1:3,0:3:8.93:67,9,0
chr10	83786266	.	CCCCG	C	782.66	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.236;DP=360;FS=12.481;HRun=0;HaplotypeScore=83.5249;InbreedingCoeff=0.8913;MQ=83.74;MQ0=0;MQRankSum=-7.931;QD=25.25;ReadPosRankSum=2.408;VQSLOD=2.5981;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:35.88:0,36,589	0/0:7,0:7:13.18:0,13,188	0/0:14,0:14:39.11:0,39,833	0/0:14,0:14:41.72:0,42,841	0/0:18,0:18:51.15:0,51,1317	0/0:13,0:13:36.11:0,36,941	0/0:18,0:18:48.15:0,48,918	1/1:0,2:2:6.02:83,6,0	0/0:14,0:14:42.08:0,42,1053	0/0:11,0:11:30.05:0,30,585	0/0:15,0:15:36.07:0,36,689	0/0:13,0:13:39.13:0,39,1104	0/0:17,0:17:51.14:0,51,1229	0/0:11,0:11:33.11:0,33,904	0/0:15,0:15:36.06:0,36,616	0/0:16,0:16:39.13:0,39,758	0/0:34,0:34:72.46:0,72,1351	0/0:11,0:11:32.08:0,32,349	1/1:0,3:3:9.03:126,9,0	1/1:0,12:12:24.08:318,24,0	1/1:2,4:6:10.58:109,11,0	0/0:15,0:15:42.14:0,42,1199	0/0:10,0:10:24.08:0,24,682	0/0:23,0:23:66.23:0,66,1826	0/0:5,0:5:6.48:0,6,63	0/0:6,0:6:16.60:0,17,232	1/1:0,8:8:24.08:309,24,0	0/0:4,0:4:4.97:0,5,45
chr10	83786271	.	TCCC	T	662.92	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.400;DP=352;FS=12.341;HRun=3;HaplotypeScore=75.5817;InbreedingCoeff=0.8960;MQ=83.88;MQ0=0;MQRankSum=-7.987;QD=22.10;ReadPosRankSum=2.427;VQSLOD=-0.2591;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:36.36:0,36,854	0/0:5,0:5:12.04:0,12,259	0/0:15,0:15:45.15:0,45,986	0/0:13,0:13:39.13:0,39,876	0/0:17,0:17:45.15:0,45,1107	0/0:12,0:12:36.12:0,36,851	0/0:20,0:20:57.20:0,57,1337	1/1:0,2:2:6.02:71,6,0	0/0:16,0:16:48.16:0,48,1104	0/0:11,0:11:33.10:0,33,725	0/0:13,0:13:36.59:0,37,841	0/0:16,0:16:48.16:0,48,1097	0/0:16,0:16:48.16:0,48,1172	0/0:12,0:12:36.12:0,36,852	0/0:13,0:13:36.12:0,36,849	0/0:16,0:16:48.16:0,48,1143	0/0:29,0:29:74.14:0,74,1795	0/0:13,0:13:34.59:0,35,421	1/1:0,3:3:9.03:108,9,0	1/1:0,12:12:27.04:292,27,0	1/1:1,4:5:9.01:91,9,0	0/0:16,0:16:45.15:0,45,1108	0/0:10,0:10:27.09:0,27,639	0/0:26,0:26:75.24:0,75,1754	0/0:7,0:7:15.01:0,15,262	0/0:4,0:4:12.04:0,12,261	1/1:0,8:8:24.06:262,24,0	0/0:2,0:2:4.26:0,4,71
chr10	83786799	.	GC	G	1253.71	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=10.238;DP=677;FS=7.580;HRun=3;HaplotypeScore=88.2062;InbreedingCoeff=0.9962;MQ=56.03;MQ0=8;MQRankSum=-10.084;QD=20.22;ReadPosRankSum=0.586;VQSLOD=2.7052;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,126,1796	0/0:12,0:12:33.11:0,33,474	0/0:33,0:16:45.14:0,45,594	0/0:40,0:17:41.96:0,42,578	0/0:27,0:27:78.25:0,78,1103	0/0:21,0:21:63.21:0,63,907	0/0:24,0:24:72.24:0,72,1036	1/1:1,16:13:21.07:260,21,0	0/0:23,0:23:66.22:0,66,950	0/0:37,0:37:99:0,105,1494	0/0:17,0:17:51.17:0,51,727	0/0:22,0:22:66.22:0,66,942	0/0:23,0:23:66.21:0,66,931	0/0:32,0:32:90.29:0,90,1274	0/0:21,0:21:60.20:0,60,863	0/0:25,0:25:75.25:0,75,1080	0/0:40,0:40:99:0,117,1685	0/0:30,0:30:87.23:0,87,1198	1/1:2,10:10:18.06:223,18,0	1/1:0,15:13:27.08:334,27,0	./.	0/0:21,0:20:60.20:0,60,864	0/0:18,0:18:54.18:0,54,774	0/0:38,0:38:99:0,108,1535	0/0:23,0:23:63.19:0,63,906	0/0:29,0:29:87.26:0,87,1202	1/1:0,18:18:48.15:594,48,0	0/0:13,0:13:39.13:0,39,550
chr10	83786864	.	AAAAAACAAAAC	A	1663.57	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=7.136;DP=629;FS=1.993;HRun=0;HaplotypeScore=233.5568;InbreedingCoeff=0.9218;MQ=63.74;MQ0=2;MQRankSum=-7.018;QD=29.19;ReadPosRankSum=1.339;VQSLOD=3.2864;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,117,5574	0/0:15,0:15:42.13:0,42,1975	0/0:33,0:28:78.25:0,78,3261	0/0:23,0:21:50.76:0,51,1941	0/0:32,0:32:87.30:0,87,4582	0/0:20,0:20:45.15:0,45,2424	0/0:23,0:23:60.21:0,60,3129	1/1:12,1:13:3.01:100,3,0	0/0:18,0:18:45.15:0,45,2207	0/0:27,0:27:63.22:0,63,3439	0/0:16,0:16:48.14:0,48,2329	0/0:24,0:24:69.22:0,69,3518	0/0:17,0:17:51.18:0,51,2609	0/0:19,0:19:54.17:0,54,2700	0/0:22,0:22:48.16:0,48,2663	0/0:27,0:27:69.24:0,69,3678	0/0:26,0:26:75.05:0,75,3771	0/0:22,0:22:57.20:0,57,3017	1/1:6,3:8:9.03:299,9,0	1/1:5,10:15:30.10:1004,30,0	./.	0/0:28,0:28:72.23:0,72,3654	0/0:27,0:27:69.24:0,69,3733	0/0:37,0:37:96.33:0,96,5222	0/0:15,0:15:39.13:0,39,2080	0/0:30,0:30:72.25:0,72,3756	1/1:12,8:20:12.04:402,12,0	0/0:26,0:26:69.24:0,69,3748
chr10	83786922	.	TG	T	2790.29	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.628;DP=671;FS=8.733;HRun=1;HaplotypeScore=87.7888;InbreedingCoeff=0.9999;MQ=90.42;MQ0=0;MQRankSum=-4.391;QD=33.22;ReadPosRankSum=-2.088;VQSLOD=2.0397;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1909	0/0:17,0:17:48.12:0,48,718	0/0:29,0:29:84.26:0,84,1258	0/0:24,1:25:74.45:0,74,1090	0/0:35,0:35:99:0,102,1606	0/0:23,0:23:66.23:0,66,1055	0/0:24,0:24:72.25:0,72,1148	1/1:0,16:16:42.14:584,42,0	0/0:20,0:20:57.15:0,57,883	0/0:29,0:29:87.03:0,87,1269	0/0:25,0:25:63.21:0,63,1002	0/0:24,0:24:69.24:0,69,1099	0/0:22,0:22:66.20:0,66,1030	0/0:26,0:26:75.17:0,75,1161	0/0:20,0:20:60.19:0,60,933	0/0:22,0:22:66.21:0,66,1023	0/0:26,0:26:75.26:0,75,1195	0/0:24,0:24:72.25:0,72,1145	1/1:0,14:14:36.09:503,36,0	1/1:0,21:21:60.11:789,60,0	1/1:0,20:20:45.15:629,45,0	0/0:27,0:27:72.24:0,72,1147	0/0:29,0:29:84.29:0,84,1326	0/0:21,0:21:63.21:0,63,1005	0/0:17,0:17:48.16:0,48,767	0/0:29,0:29:84.21:0,84,1248	1/1:0,13:13:33.11:461,33,0	0/0:32,0:32:96.33:0,96,1534
chr10	83787268	.	TG	T	1583.46	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=8.996;DP=851;FS=24.173;HRun=2;HaplotypeScore=127.2025;InbreedingCoeff=0.5886;MQ=53.38;MQ0=49;MQRankSum=-7.716;QD=8.00;ReadPosRankSum=-1.871;VQSLOD=-0.5690;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:42:28.90:0,29,610	0/1:10,0:9:52.58:53,0,105	0/0:73,1:22:66.21:0,66,882	0/0:58,0:21:54.63:0,55,687	0/0:28,0:28:74.43:0,74,989	0/0:22,0:22:58.48:0,58,707	0/0:31,0:29:30.06:0,30,382	1/1:5,22:20:48.15:610,48,0	0/0:31,0:30:81.01:0,81,1129	0/0:38,0:37:59:0,59,922	0/0:15,0:15:17.71:0,18,200	0/0:32,0:32:63.46:0,63,1199	0/0:40,0:40:76.23:0,76,1519	0/0:32,0:32:85.36:0,85,1142	0/1:30,0:29:14.15:14,0,384	0/1:30,0:30:46.36:46,0,315	0/0:34,0:33:46.62:0,47,554	0/0:34,0:32:44.17:0,44,461	1/1:2,13:11:27.52:313,28,0	1/1:0,7:4:2.98:21,3,0	1/1:7,21:19:14.40:171,14,0	0/0:25,0:25:71.57:0,72,972	0/0:28,0:27:74.39:0,74,1023	0/0:46,0:45:99:0,134,1804	0/1:27,0:26:7.38:7,0,243	0/0:30,0:26:35.33:0,35,799	1/1:2,22:21:53.87:526,54,0	0/0:11,0:10:21.05:0,21,314
chr10	83787269	.	G	GGTGTGTGT	4493.81	PASS	AB=0.810;AC=22;AF=0.407;AN=54;BaseQRankSum=0.259;DP=908;FS=10.481;HRun=0;HaplotypeScore=218.2140;InbreedingCoeff=0.6531;MQ=53.34;MQ0=49;MQRankSum=-4.023;QD=11.46;ReadPosRankSum=-5.296;VQSLOD=0.5816;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,14:49:9.49:184,9,0	1/1:3,1:11:5.77:74,6,0	0/0:73,0:22:5.98:0,6,60	0/0:58,0:21:2.40:0,2,29	0/0:26,0:27:51.16:0,51,1144	0/0:20,0:22:24.53:0,25,439	0/1:15,16:37:0:0,0,0	./.	0/0:29,0:30:55.37:0,55,1162	1/1:15,25:43:45.12:1138,45,0	0/0:4,9:16:0.94:0,1,2	0/0:29,0:32:63.16:0,63,1247	0/0:38,0:40:43.73:0,44,1533	0/0:27,0:30:54.18:0,54,1214	1/1:10,17:32:8.21:254,8,0	1/1:7,20:31:8.32:596,8,0	1/1:14,18:36:9.02:272,9,0	1/1:13,4:42:0.05:538,0,0	0/1:18,0:14:58.46:58,0,70	0/0:7,0:4:2.84:0,3,14	0/0:24,0:21:2.49:0,2,52	0/0:23,0:25:47.95:0,48,907	0/0:26,0:27:14.47:0,14,905	0/0:43,0:45:70.80:0,71,1921	1/1:6,4:32:5.56:117,6,0	1/1:17,5:35:56.22:1190,56,0	0/0:23,0:21:27:0,27,380	1/1:9,0:10:6.01:73,6,0
chr10	83787288	.	GT	G	397.26	PASS	AB=0.722;AC=4;AF=0.071;AN=56;BaseQRankSum=6.418;DP=847;FS=0.849;HRun=1;HaplotypeScore=149.9898;InbreedingCoeff=-0.0851;MQ=50.15;MQ0=42;MQRankSum=-7.260;QD=4.84;ReadPosRankSum=-1.961;VQSLOD=-0.4682;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:49:32.78:0,33,432	0/0:11,0:10:12.04:0,12,167	0/0:66,0:19:51.14:0,51,643	0/0:60,1:24:64.45:0,64,808	0/0:25,0:25:68.04:0,68,1001	0/0:16,0:16:38.23:0,38,506	0/0:38,0:36:30.53:0,31,348	0/1:12,8:20:99:298,0,317	0/0:27,0:26:74.91:0,75,1092	0/0:38,0:37:78.23:0,78,1083	0/0:16,0:16:11.75:0,12,152	0/0:32,0:32:91.70:0,92,1313	0/0:33,0:33:92.12:0,92,1374	0/0:29,0:29:83.68:0,84,1141	0/0:36,0:35:44.65:0,45,538	0/0:32,0:32:48.12:0,48,560	0/0:39,0:38:50.17:0,50,601	0/0:41,0:39:35.01:0,35,522	0/1:9,2:12:47.43:47,0,267	0/0:3,1:5:2.15:0,2,36	0/1:24,5:29:6.88:7,0,127	0/0:22,0:22:62.01:0,62,913	0/0:26,0:25:71.02:0,71,995	0/0:49,0:48:99:0,138,1958	0/0:30,0:29:14.61:0,15,203	0/0:34,0:30:80.05:0,80,1030	0/1:5,4:19:52.04:150,0,52	0/0:7,0:6:15.04:0,15,186
chr10	83787298	.	GTA	G	1077.47	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=9.617;DP=720;FS=3.562;HRun=0;HaplotypeScore=144.7157;InbreedingCoeff=0.7700;MQ=56.64;MQ0=26;MQRankSum=-4.334;QD=9.98;ReadPosRankSum=-0.119;VQSLOD=3.3504;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:40:32.27:0,32,277	0/0:9,0:8:14.98:0,15,130	0/0:49,0:25:74.35:0,74,687	0/0:46,0:25:51.46:0,51,571	0/0:20,0:20:46.38:0,46,914	0/0:17,0:17:28.20:0,28,432	0/0:35,0:33:38.92:0,39,323	1/1:11,3:14:41.80:333,42,0	0/0:27,0:26:69.98:0,70,1128	0/0:28,0:27:50.18:0,50,465	0/0:11,0:11:8.58:0,9,74	0/0:29,1:30:27.11:0,27,1076	0/0:32,0:32:79.43:0,79,1316	0/1:27,0:27:8.39:8,0,928	0/0:36,0:35:35.54:0,36,322	0/0:22,0:22:41.06:0,41,388	0/0:31,0:30:35.71:0,36,309	0/0:29,0:27:39.30:0,39,344	1/1:10,0:9:21.41:174,21,0	1/1:5,3:8:11.99:104,12,0	1/1:24,5:28:25.70:224,26,0	0/0:24,0:24:53.18:0,53,896	0/0:22,0:21:43.38:0,43,826	0/0:50,1:50:39.69:0,40,1844	0/0:25,0:24:10.30:0,10,109	0/0:26,0:22:33.97:0,34,448	1/1:13,3:16:44.83:394,45,0	0/1:4,0:3:18.91:19,0,43
chr10	83787300	.	ATGGTG	A	285.27	PASS	AB=0.796;AC=4;AF=0.071;AN=56;BaseQRankSum=7.359;DP=671;FS=1.881;HRun=0;HaplotypeScore=173.1549;InbreedingCoeff=-0.0808;MQ=57.54;MQ0=23;MQRankSum=-6.902;QD=4.53;ReadPosRankSum=0.814;VQSLOD=2.8836;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:42.60:0,43,1056	0/0:9,0:8:17.95:0,18,507	0/0:47,0:27:72.60:0,73,2198	0/0:40,0:24:68.98:0,69,1924	0/0:21,0:21:57.20:0,57,1762	0/0:14,0:14:36.12:0,36,1016	0/0:33,0:31:48.16:0,48,1290	0/0:14,0:14:36.47:0,36,156	0/0:27,0:26:75.23:0,75,2150	0/0:20,0:19:42.14:0,42,1205	0/0:11,0:11:8.46:0,8,263	0/0:32,0:32:87.28:0,87,2453	0/0:30,0:30:90.31:0,90,2771	0/0:28,0:28:81.28:0,81,2347	0/0:32,0:31:43.58:0,44,1274	0/0:20,0:20:43.69:0,44,1175	0/0:26,0:25:42.14:0,42,1045	0/0:25,0:23:35.28:0,35,889	0/1:7,2:9:33.16:67,0,33	0/1:6,2:8:22.87:26,0,23	0/1:27,2:28:13.92:14,0,120	0/0:22,0:22:60.21:0,60,1762	0/0:19,0:18:54.19:0,54,1633	0/0:50,0:49:99:0,144,4163	0/0:21,0:20:18.20:0,18,321	0/0:24,0:21:44.46:0,44,1356	0/1:7,10:17:77.95:286,0,78	0/0:4,0:3:6.02:0,6,182
chr10	83787309	.	A	AT	2798.26	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.518;DP=689;FS=1.503;HRun=1;HaplotypeScore=135.1149;InbreedingCoeff=0.9739;MQ=63.00;MQ0=12;MQRankSum=-7.013;QD=30.75;ReadPosRankSum=-3.595;VQSLOD=2.5086;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:42.04:0,42,545	0/0:13,0:12:27.09:0,27,350	0/0:48,0:33:96.28:0,96,1214	0/0:43,0:29:87.27:0,87,1107	0/0:19,0:19:54.16:0,54,686	0/0:14,0:14:39.12:0,39,506	0/0:34,0:33:57.16:0,57,724	1/1:1,14:15:43.70:629,44,0	0/0:25,0:25:69.22:0,69,893	0/0:22,0:22:51.16:0,51,650	0/0:11,0:11:8.72:0,9,117	0/0:33,0:33:84.23:0,84,1046	0/0:31,0:31:87.25:0,87,1098	0/0:29,0:29:81.25:0,81,1034	0/0:30,0:30:47.67:0,48,655	0/0:22,0:21:51.62:0,52,639	0/0:26,0:25:48.15:0,48,615	0/0:27,0:26:41.26:0,41,488	1/1:3,10:13:36.10:516,36,0	1/1:3,9:12:18.02:244,18,0	1/1:2,29:31:60.07:760,60,0	0/0:17,0:17:48.16:0,48,623	0/0:17,0:17:45.10:0,45,539	0/0:51,0:50:99:0,135,1751	0/0:21,0:20:16.41:0,16,198	0/0:22,0:21:50.44:0,50,691	1/1:11,9:20:57.15:824,57,0	0/0:6,0:5:12.04:0,12,155
chr10	83787639	.	C	CA	4248.65	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.686;DP=730;FS=14.992;HRun=3;HaplotypeScore=110.6327;InbreedingCoeff=1.0000;MQ=90.40;MQ0=0;MQRankSum=-5.613;QD=35.70;ReadPosRankSum=-1.760;VQSLOD=2.6396;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,159,1908	0/0:17,0:17:48.13:0,48,564	0/0:38,0:38:96.29:0,96,1146	0/0:32,0:32:72.19:0,72,840	0/0:20,0:20:57.13:0,57,648	0/0:14,0:14:42.12:0,42,493	0/0:20,0:20:54.15:0,54,635	1/1:4,18:22:54.18:753,54,0	0/0:29,0:29:81.25:0,81,972	0/0:28,0:28:75.22:0,75,892	0/0:18,0:18:45.14:0,45,540	0/0:32,0:32:96.27:0,96,1129	0/0:24,0:24:63.18:0,63,744	0/0:30,0:30:87.26:0,87,1038	0/0:35,0:35:99:0,99,1175	0/0:22,0:22:60.18:0,60,720	0/0:29,0:29:84.26:0,84,1008	0/0:20,0:20:51.15:0,51,612	1/1:2,17:19:54.18:752,54,0	1/1:4,22:26:60.16:815,60,0	1/1:2,19:21:54.14:734,54,0	0/0:25,0:25:72.22:0,72,864	0/0:25,0:25:66.20:0,66,792	0/0:23,0:23:66.20:0,66,792	0/0:24,0:24:66.19:0,66,780	0/0:34,0:34:93.27:0,93,1106	1/1:0,31:31:87.25:1195,87,0	0/0:16,0:16:48.15:0,48,576
chr10	83788085	.	AC	A	1625.10	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.280;DP=739;FS=1.243;HRun=1;HaplotypeScore=79.9515;InbreedingCoeff=0.9993;MQ=85.31;MQ0=0;MQRankSum=-3.040;QD=33.86;ReadPosRankSum=0.962;VQSLOD=3.5003;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,48:48:99:1720,123,0	0/0:11,0:10:30.10:0,30,471	0/0:28,0:28:75.65:0,76,1124	0/0:20,0:20:54.32:0,54,738	0/0:24,0:24:66.22:0,66,1053	0/0:28,0:28:84.26:0,84,1308	0/0:29,0:29:87.30:0,87,1387	0/0:36,0:36:99:0,105,1588	0/0:29,0:29:87.28:0,87,1367	0/0:37,0:37:99:0,108,1704	0/0:22,0:22:60.20:0,60,954	0/0:32,0:32:96.31:0,96,1507	0/0:22,0:22:66.19:0,66,1004	0/0:16,0:16:48.13:0,48,720	0/0:44,0:44:99:0,132,2081	0/0:25,0:25:72.25:0,72,1151	0/0:20,0:20:54.08:0,54,862	0/0:18,0:18:54.03:0,54,801	0/0:35,0:35:96.02:0,96,1411	0/0:20,0:20:60.19:0,60,934	0/0:24,0:24:72.23:0,72,1126	0/0:34,0:34:99:0,102,1625	0/0:14,0:14:42.13:0,42,647	0/0:20,0:20:60.17:0,60,912	0/0:21,0:20:60.14:0,60,928	0/0:27,0:27:81.28:0,81,1294	0/0:43,0:43:99:0,129,2008	0/0:12,0:12:36.12:0,36,575
chr10	83788289	.	T	TA	4901.39	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=2.743;DP=642;FS=1.298;HRun=1;HaplotypeScore=70.5986;InbreedingCoeff=0.9993;MQ=84.46;MQ0=0;MQRankSum=0.378;QD=41.89;ReadPosRankSum=-0.251;VQSLOD=4.9913;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,1934	0/0:8,0:8:24.08:0,24,333	0/0:18,0:18:54.18:0,54,751	0/0:23,0:23:36.59:0,37,795	0/0:22,0:22:66.22:0,66,921	0/0:23,0:23:66.19:0,66,889	0/0:28,0:28:84.28:0,84,1172	1/1:2,24:26:69.22:1065,69,0	0/0:22,0:22:66.22:0,66,921	0/0:21,0:21:63.21:0,63,879	0/0:17,0:17:45.12:0,45,595	0/0:26,0:26:78.26:0,78,1089	0/0:28,0:28:72.24:0,72,1005	0/0:19,0:19:57.19:0,57,797	0/0:28,0:27:81.26:0,81,1114	0/0:21,0:21:63.20:0,63,864	0/0:36,0:36:99:0,105,1466	0/0:22,0:22:60.20:0,60,838	1/1:2,21:23:60.20:959,60,0	1/1:0,13:13:33.11:528,33,0	1/1:0,37:36:95.89:1534,96,0	0/0:19,0:19:54.18:0,54,755	0/0:14,0:14:39.13:0,39,545	0/0:30,0:30:87.29:0,87,1212	0/0:17,0:17:48.16:0,48,671	0/0:26,0:26:78.25:0,78,1075	1/1:0,18:18:51.17:815,51,0	0/0:10,0:10:30.10:0,30,419
chr10	83788443	.	GGAA	G	199.35	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.469;DP=426;FS=7.160;HRun=0;HaplotypeScore=94.3814;InbreedingCoeff=0.7580;MQ=73.18;MQ0=1;MQRankSum=0.449;QD=7.97;ReadPosRankSum=-1.877;VQSLOD=2.0450;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.16:0,60,1207	0/0:4,0:4:12.04:0,12,236	0/0:34,0:20:32.23:0,32,449	0/0:40,0:30:55.59:0,56,1023	0/0:12,0:12:22.27:0,22,387	0/0:11,0:11:33.07:0,33,618	0/0:22,0:22:57.14:0,57,1074	1/1:4,3:5:9.03:134,9,0	0/0:10,0:10:21.02:0,21,410	0/0:22,0:22:56.93:0,57,1147	0/0:11,0:11:9.46:0,9,149	0/0:16,0:16:42.12:0,42,782	0/0:12,0:12:30.10:0,30,640	0/0:18,0:18:50.48:0,50,953	0/0:15,0:15:29.74:0,30,549	0/0:14,0:14:38.34:0,38,757	0/0:27,0:27:60.15:0,60,1168	0/0:20,0:20:56.65:0,57,976	1/1:5,0:4:1.57:31,2,0	1/1:8,2:10:14.53:110,15,0	0/0:5,1:6:0.47:0,0,1	0/0:21,0:21:45.15:0,45,929	0/0:14,0:14:36.01:0,36,638	0/0:16,0:16:21.67:0,22,644	0/0:7,0:7:15.03:0,15,276	0/0:21,0:21:60.14:0,60,1084	1/1:2,1:3:2.45:56,2,0	0/0:2,0:2:3.90:0,4,68
chr10	83788447	.	GA	G	175.53	PASS	AB=0.714;AC=7;AF=0.125;AN=56;BaseQRankSum=5.257;DP=403;FS=11.758;HRun=2;HaplotypeScore=78.9876;InbreedingCoeff=0.7562;MQ=70.57;MQ0=1;MQRankSum=-1.451;QD=6.75;ReadPosRankSum=-1.305;VQSLOD=-0.6951;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.16:0,60,872	0/0:5,0:4:12.04:0,12,179	0/0:34,0:19:39.57:0,40,497	0/0:37,0:28:60.22:0,60,811	0/0:11,0:11:22.27:0,22,293	0/0:11,0:11:33.11:0,33,481	0/0:22,0:22:57.19:0,57,830	1/1:6,0:4:8.91:70,9,0	0/0:8,0:8:21.07:0,21,314	0/0:20,0:20:55.73:0,56,808	0/0:11,0:11:11.95:0,12,130	0/0:15,0:15:42.14:0,42,618	0/0:11,0:11:30.10:0,30,449	0/0:18,0:18:46.04:0,46,670	0/0:13,0:13:29.20:0,29,413	0/0:14,0:14:32.81:0,33,533	0/0:22,0:22:60.15:0,60,852	0/0:19,0:19:50.45:0,50,790	0/1:3,2:4:4.71:47,0,5	1/1:6,6:12:14.94:138,15,0	0/0:2,2:5:0:0,0,0	0/0:18,0:18:45.15:0,45,672	0/0:13,0:13:39.05:0,39,532	0/0:17,0:17:35.15:0,35,500	0/0:7,0:7:18.04:0,18,237	0/0:20,0:20:60.19:0,60,870	1/1:1,2:3:8.83:56,9,0	0/0:2,0:2:5.38:0,5,53
chr10	83788473	.	G	GA	222.43	PASS	AC=30;AF=0.789;AN=38;BaseQRankSum=-2.097;DP=27;FS=0.000;HRun=0;HaplotypeScore=27.6061;InbreedingCoeff=0.2241;MQ=68.46;MQ0=0;MQRankSum=1.498;QD=10.59;ReadPosRankSum=-2.097;VQSLOD=3.0092;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:1:2.90:16,3,0	./.	./.	./.	1/1:1,0:1:2.96:19,3,0	1/1:1,0:1:2.99:24,3,0	1/1:3,0:3:5.89:39,6,0	./.	1/1:1,1:2:4.09:18,4,0	1/1:1,0:1:2.90:16,3,0	./.	1/1:2,0:2:5.87:40,6,0	1/1:0,1:1:2.60:10,3,0	0/0:1,0:1:0.47:0,0,1	0/0:1,0:1:0.47:0,0,1	0/0:1,0:1:1.82:0,2,5	1/1:0,2:2:4.97:19,5,0	0/0:1,0:1:2.50:0,2,9	./.	./.	./.	1/1:1,0:1:3:25,3,0	1/1:1,0:1:3:25,3,0	1/1:1,0:1:0.47:1,0,0	1/1:2,0:2:2.97:20,3,0	1/1:1,0:1:3:27,3,0	./.	1/1:1,0:1:2.68:11,3,0
chr10	83789249	.	A	AGAGGCGGATCTC	9674.59	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-0.316;DP=599;FS=1.580;HRun=0;HaplotypeScore=236.8292;InbreedingCoeff=0.9951;MQ=85.80;MQ0=0;MQRankSum=-12.135;QD=93.02;ReadPosRankSum=-3.832;VQSLOD=3.9911;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,123,4172	0/0:6,0:6:18.06:0,18,619	0/0:21,0:21:57.20:0,57,1799	0/0:22,0:22:59.13:0,59,1780	0/0:17,0:17:42.01:0,42,1486	0/0:24,0:24:72.23:0,72,2556	0/0:24,0:24:63.20:0,63,2193	1/1:26,3:30:69.22:2844,69,0	0/0:25,0:25:75.24:0,75,2731	0/0:28,0:28:81.28:0,81,2996	0/0:8,0:8:24.08:0,24,912	0/0:20,0:20:57.20:0,57,2161	0/0:17,0:17:48.16:0,48,1785	0/0:32,0:32:96.33:0,96,3418	0/0:21,0:21:63.20:0,63,2275	0/0:22,0:22:60.21:0,60,2250	0/0:38,0:38:99:0,102,3558	0/0:26,0:26:72.25:0,72,2587	1/1:12,7:19:41.81:1973,42,0	1/1:7,4:12:21.02:1025,21,0	1/1:16,5:26:27.09:1564,27,0	0/0:15,0:15:42.14:0,42,1573	0/0:10,0:10:27.09:0,27,974	0/0:25,0:25:69.22:0,69,2486	0/0:7,0:7:21.07:0,21,768	0/0:24,0:24:72.23:0,72,2512	1/1:9,7:17:42.14:2268,42,0	0/0:14,0:14:30.03:0,30,1072
chr10	83790144	.	AC	A	5346.70	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.226;DP=715;FS=1.103;HRun=2;HaplotypeScore=72.6089;InbreedingCoeff=0.9980;MQ=79.21;MQ0=0;MQRankSum=-1.798;QD=34.95;ReadPosRankSum=-0.533;VQSLOD=4.9167;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:99:0,138,2042	0/0:16,0:16:48.16:0,48,714	0/0:9,0:9:18.19:0,18,340	0/0:24,0:24:56.76:0,57,753	0/0:25,0:25:72.23:0,72,1058	0/0:16,0:16:48.15:0,48,699	0/0:30,0:30:90.30:0,90,1343	1/1:0,25:25:75.23:959,75,0	0/0:21,0:21:63.21:0,63,933	0/0:38,0:38:99:0,114,1703	0/0:20,0:20:54.17:0,54,788	0/0:25,0:25:75.25:0,75,1123	0/0:20,0:20:54.18:0,54,809	0/0:34,0:34:99:0,99,1483	0/0:22,0:22:66.22:0,66,987	0/0:19,0:19:57.19:0,57,845	0/0:46,0:46:99:0,138,2068	0/0:25,0:25:72.24:0,72,1079	1/1:1,11:12:33.11:425,33,0	1/1:0,14:14:42.14:541,42,0	1/1:4,84:88:99:2959,229,0	0/0:17,0:17:51.16:0,51,744	0/0:13,0:13:36.12:0,36,537	0/0:34,0:34:99:0,99,1482	0/0:21,0:21:60.19:0,60,881	0/0:29,0:28:87.29:0,87,1304	1/1:1,13:14:36.12:463,36,0	0/0:11,0:11:33.11:0,33,495
chr10	83790914	.	G	GGCTCTGGCAC	10588.80	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-2.291;DP=586;FS=7.593;HRun=0;HaplotypeScore=170.0438;InbreedingCoeff=0.9964;MQ=91.02;MQ0=0;MQRankSum=-12.690;QD=100.85;ReadPosRankSum=-2.373;VQSLOD=4.1936;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,3754	0/0:11,0:11:27.09:0,27,896	0/0:23,0:23:66.07:0,66,1579	0/0:29,0:28:81.24:0,81,2273	0/0:17,0:17:48.15:0,48,1491	0/0:16,0:16:48.15:0,48,1522	0/0:21,0:21:60.21:0,60,1963	1/1:24,6:32:84.29:3933,84,0	0/0:23,0:23:66.19:0,66,1960	0/0:29,0:29:78.25:0,78,2360	0/0:15,0:15:42.14:0,42,1368	0/0:15,0:15:42.14:0,42,1290	0/0:22,0:22:66.23:0,66,2137	0/0:25,0:25:69.24:0,69,2188	0/0:16,0:16:48.15:0,48,1476	0/0:16,0:16:48.16:0,48,1513	0/0:34,0:34:99:0,102,3314	0/0:20,0:20:60.21:0,60,1942	1/1:7,5:16:45.15:1624,45,0	1/1:8,10:19:42.14:2135,42,0	1/1:9,6:20:18.06:924,18,0	0/0:20,0:20:57.20:0,57,1688	0/0:8,0:8:24.08:0,24,799	0/0:26,0:26:75.24:0,75,2239	0/0:19,0:19:57.20:0,57,1839	0/0:30,0:30:84.28:0,84,2699	1/1:5,10:18:39.13:1973,39,0	0/0:7,0:7:21.07:0,21,612
chr10	83791159	.	ATCCTCCTCC	A	5121.33	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.753;DP=651;FS=4.190;HRun=0;HaplotypeScore=176.2298;InbreedingCoeff=0.9961;MQ=73.71;MQ0=1;MQRankSum=-6.285;QD=41.98;ReadPosRankSum=-1.831;VQSLOD=4.1695;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,111,4312	0/0:9,0:9:24.03:0,24,927	0/0:24,0:20:45.01:0,45,949	0/0:22,0:19:21.95:0,22,670	0/0:16,0:16:45.12:0,45,1576	0/0:20,0:20:51.13:0,51,1948	0/0:38,0:38:96.31:0,96,4003	1/1:14,23:37:69.08:1055,69,0	0/0:34,0:34:87.26:0,87,3805	0/0:24,0:24:60.20:0,60,2518	0/0:12,0:12:27.09:0,27,1189	0/0:16,0:16:39.13:0,39,1495	0/0:26,0:26:60.20:0,60,2549	0/0:16,0:16:42.11:0,42,1726	0/0:32,0:32:81.28:0,81,3539	0/0:17,0:15:48.15:0,48,1862	0/0:27,0:27:57.02:0,57,2762	0/0:18,0:18:36.07:0,36,1167	1/1:3,16:19:48.12:1141,48,0	1/1:2,19:20:42.07:1152,42,0	1/1:8,18:26:24.08:657,24,0	0/0:29,0:29:87.27:0,87,3741	0/0:16,0:16:36.11:0,36,1408	0/0:31,0:31:90.29:0,90,4008	0/0:21,0:21:51.16:0,51,2233	0/0:23,0:23:60.21:0,60,2695	1/1:4,15:19:39.13:1117,39,0	0/0:14,0:14:18.06:0,18,822
chr10	83791949	.	CTGTGTG	C	725.75	PASS	AB=0.963;AC=16;AF=0.364;AN=44;BaseQRankSum=3.514;DP=545;FS=15.526;HRun=0;HaplotypeScore=113.1987;InbreedingCoeff=0.6360;MQ=61.81;MQ0=17;MQRankSum=-3.047;QD=3.90;ReadPosRankSum=0.180;VQSLOD=1.3908;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:12.61:0,13,107	./.	./.	./.	0/0:19,0:19:9.01:0,9,151	0/0:14,0:15:14.11:0,14,190	1/1:22,1:23:16.38:221,16,0	0/0:26,0:26:3.59:0,4,10	0/0:17,0:17:18.95:0,19,452	1/1:22,0:18:3.01:60,3,0	1/1:10,0:10:2.99:24,3,0	0/0:18,0:17:12.03:0,12,282	0/0:11,0:10:9.50:0,10,171	0/0:17,0:15:6.01:0,6,121	1/1:18,3:22:9.03:180,9,0	1/1:10,6:17:6.49:103,6,0	1/1:28,2:29:12.21:170,12,0	0/0:22,0:23:15.03:0,15,176	./.	1/1:11,1:11:6.02:102,6,0	0/1:34,3:37:0:0,0,0	0/0:24,0:24:12.02:0,12,196	0/0:12,0:12:9.03:0,9,241	0/0:16,0:22:13.26:0,13,290	0/0:19,0:19:13.38:0,13,381	./.	./.	0/1:12,0:12:19.13:19,0,32
chr10	83792001	.	GTGTT	G	52.67	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=6.135;DP=473;FS=4.043;HRun=0;HaplotypeScore=88.7413;InbreedingCoeff=0.3391;MQ=60.01;MQ0=13;MQRankSum=-3.852;QD=0.85;ReadPosRankSum=-0.309;VQSLOD=1.5426;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:27:6.02:117,6,0	0/0:5,0:5:14.98:0,15,127	0/0:16,0:11:29.63:0,30,309	0/0:20,0:16:47.88:0,48,504	0/0:16,0:16:31.09:0,31,295	0/1:15,0:15:28.42:28,0,181	0/0:28,0:28:56.15:0,56,575	0/0:13,0:13:36.42:0,36,333	0/0:17,0:16:33.97:0,34,445	0/0:13,0:11:24:0,24,238	0/0:15,0:15:34.81:0,35,293	0/0:17,0:17:19.37:0,19,446	0/0:8,0:8:15:0,15,132	0/0:15,0:14:25.87:0,26,288	0/0:14,0:14:6.86:0,7,171	0/0:16,0:16:14.96:0,15,253	0/0:21,0:19:19.24:0,19,337	0/1:19,0:18:5.55:6,0,200	0/0:8,0:7:18.44:0,18,155	0/0:13,0:12:16.01:0,16,221	0/0:29,0:28:59.18:0,59,496	0/0:15,0:15:36.23:0,36,353	0/0:14,0:14:24.92:0,25,353	0/0:41,0:38:47.81:0,48,767	0/0:13,0:13:32.31:0,32,509	0/0:21,0:20:54.41:0,54,476	0/0:15,0:14:41.57:0,42,347	0/0:8,0:8:5.86:0,6,151
chr10	83793034	.	C	CT	4566.30	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.751;DP=573;FS=1.307;HRun=1;HaplotypeScore=65.6570;InbreedingCoeff=0.9974;MQ=63.04;MQ0=0;MQRankSum=1.937;QD=40.77;ReadPosRankSum=0.747;VQSLOD=5.4163;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.28:0,90,1153	0/0:11,0:11:33.11:0,33,428	0/0:22,0:13:27.03:0,27,326	0/0:32,0:26:63.15:0,63,761	0/0:18,0:17:51.17:0,51,662	0/0:10,0:10:30.10:0,30,390	0/0:28,0:28:84.26:0,84,1075	1/1:1,20:21:51.16:745,51,0	0/0:21,0:21:63.19:0,63,803	0/0:16,0:15:45.15:0,45,584	0/0:17,0:17:45.15:0,45,584	0/0:20,0:20:57.17:0,57,725	0/0:16,0:16:48.16:0,48,621	0/0:26,0:26:72.23:0,72,934	0/0:31,0:31:87.27:0,87,1115	0/0:18,0:18:54.18:0,54,701	0/0:31,0:31:90.17:0,90,1087	0/0:17,0:17:39.13:0,39,506	1/1:0,9:9:27.09:405,27,0	1/1:1,14:15:39.13:585,39,0	1/1:1,28:29:87.29:1286,87,0	0/0:14,0:14:39.13:0,39,504	0/0:20,0:19:54.14:0,54,671	0/0:23,0:23:69.22:0,69,896	0/0:12,0:12:33.11:0,33,427	0/0:20,0:20:57.18:0,57,733	1/1:2,35:38:99:1546,105,0	0/0:6,0:6:18.06:0,18,234
chr10	83793405	.	CTTT	C	1905.56	PASS	AB=0.834;AC=23;AF=0.411;AN=56;BaseQRankSum=-1.098;DP=505;FS=2.152;HRun=18;HaplotypeScore=85.0630;InbreedingCoeff=0.6471;MQ=59.88;MQ0=7;MQRankSum=1.045;QD=7.91;ReadPosRankSum=2.752;VQSLOD=-0.6782;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,12:25:16.12:248,16,0	1/1:4,5:10:23.82:220,24,0	0/0:17,0:6:4.26:0,4,44	0/1:15,0:4:0.76:1,0,7	0/0:24,0:26:51.47:0,51,545	0/0:16,0:20:44.12:0,44,534	1/1:4,8:12:8.74:88,9,0	0/0:26,0:25:18.56:0,19,291	0/0:18,0:20:48.08:0,48,587	1/1:16,13:30:36.59:316,37,0	1/1:10,7:17:11.72:156,12,0	0/0:13,0:13:32.22:0,32,371	0/0:11,0:14:20.97:0,21,210	0/0:12,0:12:29.84:0,30,337	1/1:2,10:13:14.71:137,15,0	0/1:6,10:16:36.17:103,0,36	1/1:9,10:21:26.42:239,26,0	1/1:6,13:19:11.61:117,12,0	0/0:13,0:12:26.96:0,27,231	0/0:18,0:18:26.28:0,26,297	0/1:15,0:14:18.34:18,0,127	0/0:16,0:18:44.02:0,44,457	0/0:13,0:17:33.30:0,33,308	0/0:11,0:12:31.35:0,31,454	0/1:14,6:20:11.81:168,0,12	0/1:10,4:14:4.66:85,0,5	0/0:37,0:38:78.43:0,78,755	1/1:6,7:13:20.53:213,21,0
chr10	83793408	.	T	TC	1080.45	PASS	AB=0.962;AC=14;AF=0.250;AN=56;BaseQRankSum=7.162;DP=520;FS=3.000;HRun=0;HaplotypeScore=79.5052;InbreedingCoeff=0.6357;MQ=61.59;MQ0=7;MQRankSum=0.737;QD=6.17;ReadPosRankSum=0.525;VQSLOD=3.3222;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:24.29:0,24,302	0/1:9,2:11:21.32:21,0,135	0/0:19,0:7:3.56:0,4,63	0/0:16,0:5:6.68:0,7,51	0/0:26,0:26:73.20:0,73,646	0/0:21,0:21:57.16:0,57,526	0/0:12,0:12:20.94:0,21,173	1/1:25,0:24:41.35:297,41,0	0/0:21,0:21:58.96:0,59,532	0/1:27,0:27:32.01:32,0,389	0/1:17,0:17:2.63:3,0,254	0/0:13,0:13:31.44:0,31,286	0/0:15,0:15:29.87:0,30,248	0/0:13,0:13:29.74:0,30,256	0/1:12,0:12:0.80:1,0,94	0/0:17,0:17:21.17:0,21,199	0/0:23,0:23:41.85:0,42,336	0/0:22,0:22:23.59:0,24,208	1/1:14,0:13:33.35:158,33,0	1/1:18,0:18:42.01:207,42,0	1/1:13,1:13:31.67:155,32,0	0/0:19,0:19:50.08:0,50,504	0/0:19,0:19:47.09:0,47,437	0/0:14,0:14:33.92:0,34,339	0/0:20,1:20:21.86:0,22,319	0/0:14,0:14:10.73:0,11,222	1/1:37,0:37:73.83:385,74,0	0/0:14,0:14:22.77:0,23,212
chr10	83794545	.	ATAGTTT	A	1271.80	PASS	AC=2;AF=0.043;AN=46;BaseQRankSum=7.342;DP=481;FS=1.102;HRun=0;HaplotypeScore=123.1361;InbreedingCoeff=0.9954;MQ=91.21;MQ0=1;MQRankSum=-7.387;QD=57.81;ReadPosRankSum=-0.761;VQSLOD=3.2444;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:57.20:1365,57,0	0/0:7,0:7:21.07:0,21,791	0/0:17,0:17:48.16:0,48,1618	0/0:22,0:22:63.14:0,63,2124	0/0:26,0:26:78.27:0,78,2878	0/0:17,0:17:51.18:0,51,1885	0/0:22,0:22:66.20:0,66,2304	./.	0/0:25,0:25:75.26:0,75,2809	0/0:21,0:21:63.22:0,63,2299	0/0:21,0:21:63.20:0,63,2228	0/0:22,0:22:66.21:0,66,2392	0/0:20,0:20:60.21:0,60,2252	0/0:17,0:17:51.18:0,51,1891	0/0:20,0:20:60.21:0,60,2259	0/0:21,0:21:63.22:0,63,2311	0/0:31,0:30:90.28:0,90,3156	0/0:28,0:28:84.29:0,84,3121	./.	./.	./.	0/0:10,0:10:30.10:0,30,1130	0/0:15,0:15:42.14:0,42,1450	0/0:34,0:34:99:0,102,3837	0/0:18,0:18:54.19:0,54,1919	0/0:15,0:15:45.15:0,45,1635	./.	0/0:30,0:30:90.31:0,90,3135
chr10	83795125	.	A	ATT	622.97	PASS	AB=0.906;AC=5;AF=0.109;AN=46;BaseQRankSum=-0.755;DP=329;FS=1.756;HRun=12;HaplotypeScore=58.2608;InbreedingCoeff=0.4028;MQ=72.92;MQ0=1;MQRankSum=-0.275;QD=9.30;ReadPosRankSum=0.802;VQSLOD=1.1640;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,25:34:54.13:712,54,0	0/1:3,0:4:3.18:3,0,21	0/1:18,0:14:6.65:7,0,72	0/1:10,0:7:6.96:7,0,14	0/0:23,0:23:50.92:0,51,470	0/0:18,0:18:38.91:0,39,351	0/0:11,0:11:24:0,24,222	./.	0/0:11,0:11:20.93:0,21,190	0/0:9,0:9:23.98:0,24,219	0/0:14,0:14:36:0,36,324	0/0:8,0:8:15.84:0,16,136	0/0:12,0:12:29.98:0,30,277	0/0:10,0:10:17.99:0,18,166	0/0:13,0:13:26.89:0,27,237	0/0:13,0:13:35.98:0,36,328	0/0:23,0:25:62.17:0,62,585	0/0:21,0:21:49.99:0,50,440	./.	./.	./.	0/0:13,0:13:26.95:0,27,248	0/0:12,0:12:23.95:0,24,222	0/0:11,0:11:30.02:0,30,277	0/0:6,0:7:20.73:0,21,168	0/0:26,0:26:43.87:0,44,434	./.	0/0:5,0:5:11.97:0,12,111
chr10	83795234	.	G	GA	1278.77	PASS	AB=0.778;AC=11;AF=0.239;AN=46;BaseQRankSum=-5.012;DP=304;FS=0.000;HRun=11;HaplotypeScore=48.5223;InbreedingCoeff=0.5940;MQ=61.01;MQ0=12;MQRankSum=0.330;QD=12.79;ReadPosRankSum=0.878;VQSLOD=3.0553;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:33:17.47:0,17,80	0/1:7,0:7:10.95:69,0,11	0/0:7,0:5:11.95:0,12,92	0/0:9,0:6:10.72:0,11,69	0/0:8,0:9:25.93:0,26,189	0/0:12,0:12:26.86:0,27,209	1/1:4,13:15:30.06:303,30,0	./.	0/0:10,0:10:26.89:0,27,209	1/1:3,11:15:13.58:292,14,0	0/1:8,8:15:3.92:136,0,4	0/0:6,0:7:13.99:0,14,98	0/0:11,0:11:19.74:0,20,160	0/0:8,0:8:20.89:0,21,160	1/1:2,6:7:3.01:30,3,0	0/1:3,3:6:31.45:76,0,31	1/1:8,23:29:33.71:525,34,0	0/0:23,0:23:56.71:0,57,441	./.	./.	./.	0/0:14,0:14:26.47:0,26,196	0/0:7,0:7:12.41:0,12,93	0/0:16,0:15:32.84:0,33,255	0/0:11,0:10:23.87:0,24,185	0/0:14,0:14:35.82:0,36,277	./.	0/0:5,0:5:5.97:0,6,46
chr10	83795998	.	T	TA	3040.14	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.441;DP=694;FS=4.380;HRun=7;HaplotypeScore=79.4467;InbreedingCoeff=0.9985;MQ=83.57;MQ0=0;MQRankSum=-1.003;QD=26.90;ReadPosRankSum=-2.879;VQSLOD=3.2007;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:60:99:0,160,1511	0/0:15,0:15:42.06:0,42,405	0/0:19,0:19:19.99:0,20,296	0/0:23,0:23:28.31:0,28,444	0/0:29,0:29:75.09:0,75,716	0/0:20,0:20:48.07:0,48,464	0/0:18,0:18:42.06:0,42,406	1/1:6,28:34:81.25:978,81,0	0/0:22,0:22:63.10:0,63,608	0/0:26,0:26:69.11:0,69,666	0/0:16,0:16:36.05:0,36,347	0/0:29,0:29:78.12:0,78,753	0/0:24,0:24:69.08:0,69,655	0/0:29,0:29:75.09:0,75,713	0/0:25,0:25:63.09:0,63,603	0/0:22,0:22:60.10:0,60,579	0/0:29,0:29:78.12:0,78,753	0/0:23,0:23:60.09:0,60,579	1/1:5,20:25:63.15:735,63,0	1/1:6,11:18:35.98:379,36,0	1/1:3,21:24:60.18:725,60,0	0/0:35,0:35:96.15:0,96,927	0/0:22,0:22:57.09:0,57,550	0/0:22,0:22:66.11:0,66,636	0/0:20,0:20:54.06:0,54,514	0/0:38,0:38:99:0,105,1014	1/1:1,11:12:33.10:398,33,0	0/0:15,0:15:45.07:0,45,434
chr10	83796993	.	C	CT	3070.55	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=2.458;DP=422;FS=0.000;HRun=7;HaplotypeScore=67.0922;InbreedingCoeff=0.7542;MQ=71.29;MQ0=6;MQRankSum=-3.196;QD=11.29;ReadPosRankSum=-1.140;VQSLOD=1.9099;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,21:28:44.96:460,45,0	0/1:9,0:9:0.37:24,0,0	0/0:21,0:11:12.38:0,12,140	0/0:12,0:9:0.33:0,0,71	0/0:23,0:23:62.99:0,63,573	0/0:20,0:20:53.97:0,54,496	0/1:11,0:11:18.51:44,0,19	1/1:12,10:19:30.03:256,30,0	0/0:8,0:8:9.97:0,10,112	1/1:21,0:21:21.49:101,21,0	1/1:13,0:12:11.19:67,11,0	0/0:14,0:14:30:0,30,276	0/0:9,0:9:12.01:0,12,112	0/0:12,0:12:32.99:0,33,295	1/1:8,0:8:6.38:35,6,0	0/1:6,0:6:0.32:0,0,1	1/1:37,0:35:21.90:157,22,0	1/1:4,16:20:51.14:596,51,0	1/1:10,0:20:31.55:221,32,0	1/1:4,2:12:17.14:119,17,0	1/1:3,2:5:4.42:47,4,0	0/0:7,0:7:12:0,12,107	0/0:12,0:12:29.94:0,30,260	0/0:11,0:11:21.03:0,21,203	1/1:4,12:15:18.06:217,18,0	1/1:4,12:16:36.06:398,36,0	1/1:6,1:8:6.18:62,6,0	1/1:0,18:18:39.12:470,39,0
chr10	83797207	.	CTTCCTTCCTTCCTTCT	C	1008.68	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=0.163;DP=442;FS=18.866;HRun=0;HaplotypeScore=187.1060;InbreedingCoeff=0.8542;MQ=68.66;MQ0=5;MQRankSum=-3.649;QD=19.78;ReadPosRankSum=-1.390;VQSLOD=0.9959;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:63.22:0,63,3214	0/0:4,0:4:9.03:0,9,520	0/0:22,0:17:28.23:0,28,563	0/0:23,0:19:27.09:0,27,993	0/0:7,0:7:15.04:0,15,646	0/0:17,0:17:42.11:0,42,2196	0/0:25,0:24:57.20:0,57,3400	1/1:19,0:19:23.69:377,24,0	0/0:24,0:24:63.19:0,63,3694	0/0:10,0:10:27.09:0,27,1798	0/0:3,0:2:9.03:0,9,492	0/0:23,0:23:54.19:0,54,2936	0/0:16,0:16:45.15:0,45,2615	0/0:25,0:25:74.26:0,74,4012	0/0:25,0:25:69.24:0,69,4430	0/0:21,0:21:57.18:0,57,2953	0/0:27,0:27:60.19:0,60,3281	0/0:9,0:9:21.05:0,21,834	1/1:2,6:8:17.99:368,18,0	1/1:2,1:3:8.92:163,9,0	1/1:6,12:17:3.01:120,3,0	0/0:4,0:4:12.04:0,12,636	0/0:6,0:6:18.06:0,18,931	0/0:33,0:33:77.98:0,78,3825	0/0:8,0:8:21.07:0,21,895	0/0:21,0:21:57.20:0,57,2754	1/1:1,2:3:3.01:135,3,0	0/0:10,0:10:21.05:0,21,908
chr10	83797243	.	CT	C	642.42	PASS	AB=0.728;AC=4;AF=0.071;AN=56;BaseQRankSum=6.669;DP=506;FS=16.750;HRun=3;HaplotypeScore=68.0292;InbreedingCoeff=-0.1060;MQ=50.11;MQ0=11;MQRankSum=-1.425;QD=9.31;ReadPosRankSum=0.744;VQSLOD=0.0272;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:61.79:0,62,841	0/0:5,0:5:12.04:0,12,153	0/0:22,0:4:9:0,9,119	0/0:32,0:8:14.62:0,15,178	0/0:13,0:13:36.11:0,36,490	0/0:12,0:12:36.12:0,36,516	0/0:28,0:27:76.32:0,76,1039	0/0:7,0:5:9.03:0,9,126	0/0:29,0:29:81.27:0,81,1161	0/0:16,0:15:35.68:0,36,502	0/0:5,0:4:12.04:0,12,171	0/0:23,0:23:66.21:0,66,915	0/0:23,0:23:60.20:0,60,853	0/0:24,0:24:69.22:0,69,973	0/0:23,0:23:66.22:0,66,948	0/0:20,0:20:35.90:0,36,516	0/0:38,1:37:1.52:0,2,627	0/1:11,2:13:48.38:48,0,131	0/0:12,0:9:18.48:0,18,216	0/0:1,0:1:3:0,3,26	0/0:21,0:19:18.69:0,19,117	0/0:7,0:6:15.05:0,15,215	0/0:7,0:7:21.06:0,21,280	0/0:43,0:43:68.67:0,69,1663	0/1:8,7:13:86.92:167,0,87	0/1:14,15:28:99:412,0,170	0/0:2,0:2:2.96:0,3,19	0/1:7,5:12:75.49:124,0,75
chr10	83797265	.	CTCCTTTCCTTTCCTT	C	2087.20	PASS	AB=0.899;AC=21;AF=0.438;AN=48;BaseQRankSum=2.847;DP=490;FS=1.330;HRun=0;HaplotypeScore=182.3738;InbreedingCoeff=0.5707;MQ=50.26;MQ0=17;MQRankSum=-1.007;QD=10.99;ReadPosRankSum=-2.720;VQSLOD=2.0768;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:4.62:46,5,0	1/1:3,0:3:6.02:210,6,0	./.	./.	0/0:14,0:14:39.13:0,39,1619	0/0:11,0:11:15.05:0,15,531	1/1:31,0:29:30.10:500,30,0	./.	0/0:25,0:25:42.14:0,42,1448	1/1:8,12:18:36.04:522,36,0	./.	0/0:24,0:24:45.14:0,45,1692	0/0:23,0:23:39.13:0,39,1602	0/0:25,0:25:36.12:0,36,1277	1/1:22,0:22:24.07:507,24,0	1/1:7,10:17:3.01:102,3,0	0/1:21,16:34:99:234,0,216	0/1:12,0:12:29.95:30,0,208	1/1:10,0:8:0.03:17,0,0	1/1:2,0:2:3:28,3,0	1/1:12,0:10:3.01:57,3,0	0/0:8,0:7:9.03:0,9,302	0/0:10,0:9:18.06:0,18,776	0/0:50,0:50:65.51:0,66,4607	0/0:16,0:14:9.50:0,10,303	0/0:27,0:26:16.49:0,16,560	0/1:3,0:3:3.28:3,0,15	0/0:13,0:13:15.03:0,15,353
chr10	83797268	.	CT	C	109.36	PASS	AB=0.788;AC=4;AF=0.071;AN=56;BaseQRankSum=4.293;DP=482;FS=0.000;HRun=3;HaplotypeScore=76.7569;InbreedingCoeff=-0.0786;MQ=50.59;MQ0=17;MQRankSum=-2.773;QD=4.05;ReadPosRankSum=-0.899;VQSLOD=-0.1523;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,2:20:6.50:0,6,565	0/0:3,0:3:9.03:0,9,128	0/0:16,0:1:3:0,3,29	0/0:21,0:3:3.46:0,3,24	0/0:16,0:16:45.12:0,45,611	0/0:12,0:12:36.10:0,36,499	0/0:28,0:26:72.24:0,72,1003	0/0:10,0:4:9.03:0,9,129	0/0:27,0:27:75.24:0,75,1061	0/0:20,0:18:41.98:0,42,522	0/0:3,0:3:6.01:0,6,70	0/0:24,0:24:63.18:0,63,881	0/0:22,0:22:66.22:0,66,949	0/0:24,0:24:72.21:0,72,998	0/0:22,0:22:66.10:0,66,823	0/0:17,0:17:22.29:0,22,283	0/0:36,0:33:28.84:0,29,369	0/0:12,0:12:21.85:0,22,195	0/1:7,3:8:86.41:86,0,111	0/1:1,1:2:19.04:19,0,36	0/1:10,1:9:35.69:42,0,36	0/0:8,0:7:21.06:0,21,285	0/0:10,0:9:24.07:0,24,327	0/0:51,0:51:99:0,137,2013	0/0:15,0:13:21.02:0,21,200	0/0:25,0:24:48.37:0,48,492	0/1:3,1:4:11.91:70,0,12	0/0:13,0:13:26.94:0,27,248
chr10	83797290	.	T	TC	99.88	PASS	AB=0.747;AC=3;AF=0.054;AN=56;BaseQRankSum=3.404;DP=488;FS=3.035;HRun=0;HaplotypeScore=76.6705;InbreedingCoeff=-0.0672;MQ=53.87;MQ0=16;MQRankSum=-2.509;QD=2.70;ReadPosRankSum=-0.645;VQSLOD=2.7885;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:12,9:21:99:148,0,369	0/0:4,0:4:12.04:0,12,168	0/0:9,0:1:3.01:0,3,42	0/0:21,0:4:6.02:0,6,82	0/0:19,0:19:54.18:0,54,755	0/0:10,0:10:30.07:0,30,386	0/0:23,0:21:60.20:0,60,835	0/0:16,0:10:24.07:0,24,320	0/0:29,0:29:78.25:0,78,1076	0/0:20,0:18:51.16:0,51,694	0/0:7,0:7:18.06:0,18,251	0/0:24,0:24:69.23:0,69,963	0/0:22,0:22:63.21:0,63,869	0/0:30,0:30:90.30:0,90,1254	0/0:19,0:19:54.16:0,54,718	0/0:16,0:16:18.06:0,18,242	0/0:31,0:29:23.55:0,24,274	0/0:14,0:14:23.31:0,23,345	0/0:7,0:6:18.06:0,18,250	0/1:1,1:2:35.84:39,0,36	0/1:12,2:13:8.06:8,0,323	0/0:12,0:11:33.11:0,33,461	0/0:13,0:12:36.12:0,36,501	0/0:58,0:58:99:0,169,2284	0/0:10,0:8:21.07:0,21,292	0/0:20,0:19:56.97:0,57,720	0/0:7,0:7:21.07:0,21,290	0/0:10,0:10:27.56:0,28,378
chr10	83797486	.	G	GC	308.54	PASS	AB=0.900;AC=10;AF=0.179;AN=56;BaseQRankSum=2.679;DP=385;FS=2.039;HRun=2;HaplotypeScore=60.8607;InbreedingCoeff=0.5997;MQ=85.02;MQ0=1;MQRankSum=-1.875;QD=5.23;ReadPosRankSum=-2.375;VQSLOD=-0.1251;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,102,1201	0/0:8,0:8:7.99:0,8,67	0/0:12,0:12:28.56:0,29,279	0/1:14,0:14:9.38:9,0,253	0/0:7,0:7:15.05:0,15,195	0/0:18,0:18:54.18:0,54,701	0/0:17,0:17:45.08:0,45,369	1/1:3,0:3:0.44:1,0,0	0/0:26,0:26:75.20:0,75,938	0/0:10,0:9:17.30:0,17,131	0/0:12,0:12:29.70:0,30,208	0/0:18,0:18:48.13:0,48,607	0/0:10,0:10:27.09:0,27,350	0/0:23,0:23:69.21:0,69,868	0/0:14,0:14:29.34:0,29,140	0/0:13,0:13:28.33:0,28,173	0/0:29,0:29:71.41:0,71,391	0/0:10,0:10:26.38:0,26,203	0/1:3,1:4:9.71:26,0,10	1/1:2,2:4:2.53:33,3,0	1/1:8,17:24:18.42:190,18,0	0/0:14,0:14:39.12:0,39,495	0/0:6,0:6:18.06:0,18,233	0/0:18,0:18:54.18:0,54,700	0/0:6,0:6:10.75:0,11,58	0/0:14,0:14:32.46:0,32,199	1/1:1,7:9:15.51:188,16,0	0/0:2,0:2:2.22:0,2,7
chr10	83797488	.	G	GC	3731.43	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-5.571;DP=395;FS=0.000;HRun=8;HaplotypeScore=49.4381;InbreedingCoeff=0.8722;MQ=83.46;MQ0=1;MQRankSum=-2.409;QD=20.39;ReadPosRankSum=-1.933;VQSLOD=2.7615;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:39:56.51:0,57,179	1/1:0,8:8:21.06:242,21,0	0/0:13,0:13:21.60:0,22,204	0/0:12,0:12:19.98:0,20,160	0/0:10,0:10:20.98:0,21,186	0/0:19,0:19:54.02:0,54,494	1/1:7,9:16:2.64:284,3,0	1/1:5,0:5:1.72:4,2,0	0/0:27,0:27:75.02:0,75,681	1/1:4,6:9:12.04:139,12,0	1/1:2,9:12:23.90:257,24,0	0/0:20,0:20:51:0,51,462	0/0:10,0:10:26.84:0,27,247	0/0:25,0:25:62.97:0,63,562	1/1:0,13:13:36.11:415,36,0	1/1:2,10:12:30.09:346,30,0	1/1:5,25:31:72.05:811,72,0	1/1:0,0:10:22.79:116,23,0	1/1:5,0:4:3.01:34,3,0	1/1:4,0:4:4.24:27,4,0	1/1:25,0:24:18.94:205,19,0	0/0:13,0:13:33.01:0,33,302	0/0:6,0:6:18:0,18,160	0/0:18,0:18:51.03:0,51,467	1/1:0,6:6:18.05:207,18,0	1/1:1,13:14:36.11:414,36,0	1/1:10,0:10:17.36:195,17,0	1/1:0,2:2:3.01:35,3,0
chr10	83798971	.	ACGTCATCCCTCTGCTGGTT	A	4713.21	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.748;DP=725;FS=5.261;HRun=0;HaplotypeScore=352.2138;InbreedingCoeff=0.9490;MQ=85.64;MQ0=0;MQRankSum=-7.413;QD=30.21;ReadPosRankSum=-0.549;VQSLOD=2.1247;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,11:27:27.05:1287,27,0	0/0:13,0:13:30.10:0,30,2133	0/0:29,0:29:36.10:0,36,1698	0/0:21,0:21:33.11:0,33,1679	0/0:21,0:21:54.17:0,54,4022	0/0:27,0:27:75.26:0,75,5538	0/0:49,0:49:99:0,111,8369	1/1:27,4:31:12.03:179,12,0	0/0:30,0:30:75.24:0,75,6169	0/0:19,0:19:27.09:0,27,2145	0/0:19,0:19:42.14:0,42,3302	0/0:29,0:29:72.23:0,72,5708	0/0:32,0:32:66.23:0,66,5208	0/0:29,0:29:69.23:0,69,5430	0/0:28,0:28:69.24:0,69,5886	0/0:25,0:25:57.20:0,57,5079	0/0:44,0:44:99:0,105,8862	0/0:29,0:29:72.25:0,72,5730	1/1:11,5:16:15.05:771,15,0	1/1:9,11:20:24.08:1048,24,0	1/1:28,9:37:2.92:110,3,0	0/0:20,0:20:42.14:0,42,3304	0/0:17,0:17:36.12:0,36,2862	0/0:36,0:36:87.30:0,87,6249	0/0:21,0:21:60.21:0,60,5097	0/0:24,0:24:54.18:0,54,3562	1/1:14,11:25:27.09:1319,27,0	0/0:7,0:7:15.05:0,15,1217
chr10	83799722	.	TC	T	1336.44	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.115;DP=307;FS=0.000;HRun=7;HaplotypeScore=53.8529;InbreedingCoeff=0.8829;MQ=65.76;MQ0=2;MQRankSum=-1.063;QD=15.91;ReadPosRankSum=0.660;VQSLOD=3.1558;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:12:29.68:331,30,0	0/0:4,0:3:9.03:0,9,113	0/0:19,0:15:40.80:0,41,455	0/0:16,0:11:21.93:0,22,270	0/0:4,0:4:6.02:0,6,76	0/0:7,0:6:15.05:0,15,189	0/0:19,0:19:51.11:0,51,621	1/1:6,8:14:23.99:232,24,0	0/0:7,0:7:18.06:0,18,226	0/0:17,0:16:33.10:0,33,403	0/0:7,0:7:21.07:0,21,264	0/0:12,0:12:27.09:0,27,340	0/0:12,0:12:30.05:0,30,348	0/0:6,0:5:12.04:0,12,149	0/0:8,0:8:24.08:0,24,302	0/0:14,0:14:26.58:0,27,370	0/0:12,0:12:29.88:0,30,333	0/0:8,0:8:21.05:0,21,249	1/1:6,6:9:15.03:153,15,0	1/1:3,7:9:21.05:214,21,0	1/1:10,18:28:47.76:466,48,0	0/0:7,0:7:18.05:0,18,219	0/0:3,0:3:6.02:0,6,75	0/0:21,0:22:34.75:0,35,410	0/0:8,0:8:12.04:0,12,151	0/0:9,0:9:21.07:0,21,260	1/1:4,4:8:12.02:122,12,0	0/0:1,0:1:3.01:0,3,38
chr10	83801033	.	CCA	C	258.08	PASS	AB=0.963;AC=14;AF=0.250;AN=56;BaseQRankSum=-0.014;DP=636;FS=1.672;HRun=0;HaplotypeScore=87.2300;InbreedingCoeff=0.6460;MQ=70.58;MQ0=1;MQRankSum=-0.555;QD=1.67;ReadPosRankSum=-5.398;VQSLOD=0.1560;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:3.90:22,4,0	0/0:18,0:18:39.12:0,39,608	0/0:33,0:30:56.60:0,57,887	0/0:31,0:27:54.07:0,54,796	0/0:20,0:20:51.14:0,51,783	0/0:14,0:14:33.10:0,33,512	0/0:22,1:23:16.95:0,17,674	1/1:17,0:17:14.43:128,14,0	0/0:20,0:20:48.16:0,48,780	0/0:22,0:22:45.14:0,45,683	0/0:16,0:16:42.04:0,42,604	0/0:33,0:33:99:0,99,1535	0/0:22,0:22:63.21:0,63,1020	0/0:24,0:24:60.19:0,60,953	0/0:25,0:25:66.19:0,66,1026	0/0:11,0:11:30.09:0,30,465	0/0:35,0:35:93.24:0,93,1423	0/0:23,2:25:32.08:0,32,1032	1/1:9,0:9:11.99:102,12,0	1/1:15,0:15:0.83:44,1,0	1/1:38,0:37:4.36:45,4,0	0/1:23,2:25:8.15:8,0,830	0/0:22,0:22:17.04:0,17,784	0/0:48,1:49:91.69:0,92,1876	0/1:15,0:15:50.53:51,0,106	0/0:21,0:21:36.04:0,36,499	1/1:17,0:17:1.66:18,2,0	0/0:17,0:17:48.13:0,48,726
chr10	83801611	.	TC	T	2434.58	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.894;DP=491;FS=27.351;HRun=1;HaplotypeScore=86.6597;InbreedingCoeff=0.9821;MQ=64.28;MQ0=6;MQRankSum=-5.584;QD=36.89;ReadPosRankSum=2.612;VQSLOD=1.7645;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:62.51:0,63,782	0/0:10,0:10:27.09:0,27,376	0/0:36,0:15:34.65:0,35,466	0/0:35,0:14:15.77:0,16,167	0/0:24,0:24:69.15:0,69,971	0/0:9,0:9:25.90:0,26,363	0/0:12,0:11:27.09:0,27,390	0/0:27,0:27:81.01:0,81,1136	0/0:10,0:10:30.08:0,30,427	0/0:13,0:14:36.08:0,36,526	0/0:13,0:13:35.95:0,36,506	0/0:13,0:13:33.01:0,33,408	0/0:10,0:10:29.69:0,30,390	0/0:8,0:8:12.04:0,12,172	0/0:15,0:15:20.27:0,20,503	0/0:14,0:13:33.11:0,33,479	0/0:27,0:26:50.96:0,51,782	1/1:0,16:16:45.11:587,45,0	0/0:29,0:28:75.06:0,75,1037	0/0:23,0:22:60.13:0,60,862	0/0:7,0:7:17.72:0,18,237	0/0:15,0:15:39.13:0,39,556	0/0:17,0:17:36.12:0,36,510	0/0:11,0:11:29.92:0,30,416	1/1:0,24:24:72.19:975,72,0	1/1:1,15:16:48.16:659,48,0	0/0:16,0:16:45.01:0,45,563	1/1:1,9:9:27.09:373,27,0
chr10	83801618	.	CTTTT	C	3100.72	PASS	AB=0.800;AC=29;AF=0.518;AN=56;BaseQRankSum=6.241;DP=530;FS=3.375;HRun=19;HaplotypeScore=108.7147;InbreedingCoeff=0.7349;MQ=60.85;MQ0=16;MQRankSum=-2.653;QD=11.75;ReadPosRankSum=5.402;VQSLOD=-0.5980;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:25:44.44:0,44,316	1/1:5,5:10:14.90:174,15,0	0/0:54,0:16:9.58:0,10,190	0/0:48,0:15:7.86:0,8,172	0/0:24,0:31:71.49:0,71,893	0/0:10,0:10:21:0,21,233	1/1:9,1:11:17.23:155,17,0	0/1:23,4:27:28.88:229,0,29	0/0:10,0:10:15.01:0,15,275	0/1:9,6:16:2.19:123,0,2	1/1:8,4:13:4.98:81,5,0	0/0:15,0:14:33.01:0,33,518	0/0:11,0:11:27.01:0,27,383	0/0:9,0:10:17.96:0,18,209	1/1:11,3:15:29.08:266,29,0	1/1:4,8:13:3.88:218,4,0	1/1:14,11:24:29.61:327,30,0	1/1:9,0:19:14.55:227,15,0	1/1:12,8:21:44.19:437,44,0	1/1:16,6:21:23.79:229,24,0	0/1:4,0:5:0.22:18,0,0	0/0:14,0:17:28.15:0,28,316	0/0:22,0:21:22.41:0,22,330	0/0:10,0:10:24.06:0,24,441	1/1:15,0:24:7.04:214,7,0	1/1:7,0:16:9.77:224,10,0	1/1:10,5:16:24.92:248,25,0	1/1:2,0:8:2.05:137,2,0
chr10	83801634	.	TTTTC	T	1644.06	PASS	AB=0.918;AC=18;AF=0.321;AN=56;BaseQRankSum=10.842;DP=555;FS=15.537;HRun=0;HaplotypeScore=111.1627;InbreedingCoeff=-0.1639;MQ=61.75;MQ0=23;MQRankSum=-5.794;QD=6.47;ReadPosRankSum=7.043;VQSLOD=0.7303;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:43.91:0,44,381	0/1:8,0:8:26.95:56,0,27	0/0:74,0:19:7.47:0,7,296	0/0:67,0:19:24.63:0,25,263	0/0:28,0:28:41.13:0,41,773	0/0:12,0:12:24.05:0,24,297	0/1:4,7:10:17.86:152,0,18	0/1:25,1:26:92.47:176,0,92	0/0:8,0:8:21.04:0,21,260	0/1:16,1:17:49.04:49,0,227	0/1:9,0:9:10.73:11,0,73	0/0:13,0:12:30.03:0,30,415	0/0:13,0:13:28.55:0,29,357	0/0:13,0:13:29.77:0,30,326	1/1:10,2:12:14.03:189,14,0	1/1:12,0:12:0.49:94,0,0	0/1:23,4:26:99:177,0,126	0/1:21,0:21:58.84:94,0,59	0/1:23,2:25:99:202,0,154	0/1:13,4:16:34.20:241,0,34	0/1:4,1:5:5.95:6,0,12	0/0:14,0:14:27.05:0,27,227	0/0:20,0:19:4.86:0,5,308	0/0:11,0:11:29.50:0,30,385	0/1:19,0:19:77.49:117,0,77	0/1:17,0:17:50.84:77,0,51	0/1:15,2:17:73.76:109,0,74	0/1:11,0:10:2.71:57,0,3
chr10	83804532	.	AAC	A	380.96	PASS	AB=0.927;AC=16;AF=0.400;AN=40;BaseQRankSum=3.702;DP=415;FS=16.113;HRun=0;HaplotypeScore=64.8054;InbreedingCoeff=0.1633;MQ=66.70;MQ0=10;MQRankSum=0.651;QD=2.44;ReadPosRankSum=-0.150;VQSLOD=-0.0876;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,2:5:5.93:39,6,0	./.	./.	./.	0/1:10,1:10:20.34:20,0,99	0/0:21,0:19:5.99:0,6,48	./.	0/1:12,1:13:34.26:34,0,55	0/0:15,0:15:14.95:0,15,155	0/0:6,0:7:3:0,3,26	0/0:13,0:12:12.02:0,12,156	0/0:9,0:9:6.02:0,6,88	0/0:12,0:12:14.88:0,15,166	0/0:8,0:7:0:0,0,0	0/1:13,0:13:14.25:14,0,99	0/0:19,0:29:17.85:0,18,170	1/1:20,3:25:23.58:195,24,0	./.	1/1:6,0:9:2.84:14,3,0	./.	0/0:12,0:11:11.96:0,12,93	0/1:8,1:9:26.12:26,0,38	0/1:28,3:33:99:138,0,318	1/1:12,0:14:2.84:14,3,0	0/1:15,0:15:5.46:8,0,5	./.	1/1:7,0:8:2.74:12,3,0
chr10	83806004	.	AC	A	3155.19	PASS	AB=0.893;AC=29;AF=0.518;AN=56;BaseQRankSum=5.186;DP=502;FS=6.226;HRun=10;HaplotypeScore=56.8879;InbreedingCoeff=-0.0536;MQ=78.98;MQ0=0;MQRankSum=-1.848;QD=8.13;ReadPosRankSum=2.861;VQSLOD=1.6893;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:29:8.70:0,9,469	1/1:1,3:4:9:78,9,0	0/0:13,0:13:18.48:0,18,131	0/1:16,0:15:41.84:70,0,42	0/1:14,0:14:0.57:1,0,228	0/1:13,2:15:19.02:19,0,266	1/1:10,26:38:82.03:689,82,0	0/1:16,1:18:2.02:2,0,187	0/1:14,5:19:59.09:59,0,320	1/1:4,12:17:35.02:292,35,0	1/1:0,9:9:26.99:234,27,0	0/1:13,2:15:28.09:28,0,155	0/1:8,2:10:22.06:22,0,218	0/1:18,3:21:7.03:7,0,362	1/1:1,12:13:32.99:286,33,0	1/1:0,11:12:35.03:293,35,0	1/1:6,39:48:99:1008,120,0	0/0:31,1:33:51.94:0,52,755	0/0:16,0:16:30.02:0,30,302	0/0:12,0:12:1.23:0,1,208	0/1:37,6:43:87.18:87,0,670	0/1:9,0:9:7.75:8,0,147	0/1:11,2:13:31.06:31,0,138	0/1:16,2:18:16.05:16,0,272	0/0:10,1:11:0.88:0,1,239	0/1:14,4:18:77.15:77,0,125	0/1:9,2:9:8:8,0,148	0/1:6,1:7:14.02:14,0,88
chr10	83806854	.	T	TA	1148.83	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.841;DP=565;FS=4.785;HRun=0;HaplotypeScore=59.2255;InbreedingCoeff=0.8812;MQ=82.02;MQ0=0;MQRankSum=-5.159;QD=34.81;ReadPosRankSum=1.839;VQSLOD=3.2336;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:78.27:1244,78,0	0/0:2,0:2:6.02:0,6,82	0/0:19,0:19:46.08:0,46,519	0/0:25,0:25:57.84:0,58,739	0/0:23,0:23:65.92:0,66,853	0/0:21,0:21:60.16:0,60,786	0/0:36,0:36:99:0,108,1451	0/0:21,0:21:60.18:0,60,796	0/0:21,0:21:63.11:0,63,839	0/0:17,0:17:48.13:0,48,625	0/0:11,0:11:30.10:0,30,417	0/0:23,0:23:69.20:0,69,913	0/0:13,0:13:39.10:0,39,509	0/0:30,0:30:87.27:0,87,1182	0/0:15,0:15:45.12:0,45,593	0/0:32,0:32:96.29:0,96,1304	0/0:26,0:26:75.25:0,75,1046	0/0:20,0:20:60.19:0,60,818	0/0:14,0:14:36.06:0,36,449	0/0:9,0:9:27.09:0,27,374	0/0:38,0:38:99:0,114,1523	0/0:7,0:7:21.06:0,21,276	0/0:5,0:5:15.05:0,15,209	0/0:31,0:31:90.24:0,90,1168	0/0:11,0:11:33.11:0,33,459	0/0:19,0:19:57.17:0,57,750	0/0:35,0:35:99:0,102,1368	0/0:8,0:8:18.04:0,18,233
chr10	83807152	.	TTATATATATATATATATA	T	2162	PASS	AC=16;AF=0.615;AN=26;BaseQRankSum=1.800;DP=145;FS=2.133;HRun=0;HaplotypeScore=68.7029;InbreedingCoeff=0.4968;MQ=64.69;MQ0=6;MQRankSum=0.494;QD=24.29;ReadPosRankSum=-0.600;VQSLOD=1.7015;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,2:16:18.03:441,18,0	./.	./.	0/0:15,0:4:0:0,0,0	./.	./.	./.	1/1:9,21:30:59.79:942,60,0	./.	1/1:4,0:4:2.37:8,2,0	1/1:3,0:3:3.01:49,3,0	./.	./.	./.	0/0:3,0:3:2.98:0,3,21	0/0:3,0:3:2.99:0,3,23	1/1:11,0:16:9.01:194,9,0	0/0:2,0:2:3.01:0,3,49	1/1:4,1:5:12.04:397,12,0	1/1:3,0:3:2.83:25,3,0	0/0:4,0:4:2.80:0,3,13	./.	./.	./.	./.	./.	1/1:9,1:10:9.02:210,9,0	./.
chr10	83807222	.	TTTTC	T	1063.15	PASS	AC=18;AF=0.375;AN=48;BaseQRankSum=-0.687;DP=204;FS=7.508;HRun=0;HaplotypeScore=60.6345;InbreedingCoeff=0.7293;MQ=72.72;MQ0=2;MQRankSum=3.049;QD=22.15;ReadPosRankSum=1.093;VQSLOD=2.4740;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:15:22.40:107,22,0	0/0:5,0:5:6.02:0,6,90	./.	./.	1/1:0,13:13:39.01:525,39,0	1/1:0,1:1:3.01:46,3,0	0/0:8,0:8:11.97:0,12,135	0/0:32,0:32:14.84:0,15,101	1/1:0,3:3:9.03:139,9,0	0/0:3,0:10:17.87:0,18,162	0/0:3,0:7:12.02:0,12,160	1/1:0,3:3:3.01:46,3,0	1/1:1,4:5:9.02:119,9,0	1/1:1,0:1:3.01:46,3,0	0/0:6,0:6:15.05:0,15,269	0/0:4,0:4:12.04:0,12,233	0/0:14,0:14:21.49:0,21,290	0/0:6,0:6:8.99:0,9,100	0/0:10,0:13:18.01:0,18,221	0/0:2,0:5:8.95:0,9,95	./.	1/1:0,2:2:5.97:65,6,0	./.	1/1:0,5:5:9.03:139,9,0	0/0:3,0:2:3:0,3,28	0/0:2,0:2:5.88:0,6,51	0/0:2,0:4:6.02:0,6,91	0/0:0,0:5:12.04:0,12,203
chr10	83807260	.	TTCTTTC	T	474.79	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=3.781;DP=239;FS=1.224;HRun=0;HaplotypeScore=60.9776;InbreedingCoeff=0.1743;MQ=52.71;MQ0=10;MQRankSum=-4.105;QD=11.58;ReadPosRankSum=-1.650;VQSLOD=1.9698;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,7:13:33.06:460,33,0	0/0:6,0:6:15.03:0,15,259	0/0:10,0:4:12.02:0,12,120	0/0:10,0:3:4.83:0,5,41	0/0:14,0:14:1.19:0,1,99	0/0:6,0:6:16.28:0,16,169	0/0:6,0:6:18.04:0,18,300	0/0:26,0:24:72.16:0,72,828	0/0:5,0:5:9.75:0,10,71	0/0:6,0:6:18.05:0,18,298	0/0:5,0:5:15.05:0,15,337	0/0:7,0:7:13.28:0,13,144	0/0:5,0:5:4.71:0,5,14	0/0:4,0:4:9.91:0,10,113	0/0:13,0:13:38.70:0,39,681	0/0:10,0:10:27.08:0,27,522	0/0:17,0:17:48.13:0,48,812	0/1:11,0:9:43.03:43,0,187	0/0:13,0:10:25.89:0,26,497	0/0:6,0:6:15.05:0,15,318	0/0:1,0:1:3.01:0,3,30	0/0:2,0:2:3.62:0,4,11	0/0:1,0:1:3.01:0,3,31	0/0:9,0:9:15.76:0,16,132	0/1:6,0:5:47.19:67,0,47	0/1:6,0:5:25.22:25,0,163	0/0:11,0:11:30.08:0,30,429	0/0:5,0:5:12.04:0,12,328
chr10	83807265	.	TC	T	383	PASS	AB=0.907;AC=13;AF=0.232;AN=56;BaseQRankSum=5.985;DP=235;FS=5.175;HRun=1;HaplotypeScore=42.3171;InbreedingCoeff=0.3235;MQ=55.24;MQ0=10;MQRankSum=-0.391;QD=5.04;ReadPosRankSum=2.260;VQSLOD=0.7914;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:13:30.22:216,30,0	0/0:5,0:5:12.03:0,12,131	0/0:9,0:4:12.03:0,12,125	0/0:10,0:3:5.99:0,6,57	0/1:15,0:15:47.15:78,0,47	0/0:6,0:6:7.69:0,8,135	0/0:5,0:5:14.98:0,15,133	0/0:26,0:24:70.60:0,71,646	0/1:5,0:5:15.94:16,0,49	0/0:4,0:4:12:0,12,112	0/0:4,0:4:12.01:0,12,130	0/0:7,0:7:4.71:0,5,117	1/1:5,0:5:8.18:41,8,0	0/0:6,0:6:7.70:0,8,148	0/0:13,0:13:30.12:0,30,358	0/0:12,0:12:33.07:0,33,349	0/0:16,0:16:47.85:0,48,448	0/1:8,3:9:60.41:60,0,60	0/0:12,0:9:22.01:0,22,201	0/0:5,0:5:11.99:0,12,116	0/0:1,0:1:3.01:0,3,32	1/1:2,0:2:5.55:29,6,0	0/0:1,0:1:3.01:0,3,32	0/1:9,0:9:9.92:10,0,106	1/1:2,3:5:8.90:66,9,0	0/1:4,2:5:27.30:27,0,42	0/0:12,0:12:33.09:0,33,361	0/0:5,0:5:9.61:0,10,74
chr10	83807552	.	TA	T	3743.66	PASS	AB=0.702;AC=33;AF=0.589;AN=56;BaseQRankSum=6.296;DP=427;FS=1.586;HRun=13;HaplotypeScore=62.4245;InbreedingCoeff=0.6174;MQ=78.95;MQ0=1;MQRankSum=-1.351;QD=11.85;ReadPosRankSum=2.483;VQSLOD=3.7227;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:36:53.97:169,54,0	1/1:1,8:9:23.85:175,24,0	0/0:15,0:11:1.17:0,1,108	0/1:18,1:16:9.30:9,0,38	0/0:22,0:24:11.40:0,11,245	0/0:20,0:20:45.06:0,45,433	0/1:3,9:12:2.36:148,0,2	1/1:5,25:30:59.67:477,60,0	0/0:7,0:7:15.02:0,15,146	1/1:4,16:20:32.71:240,33,0	0/1:3,4:7:11.55:81,0,12	0/0:11,1:12:26.65:0,27,226	0/1:6,1:8:7.75:8,0,117	0/0:7,0:10:20.85:0,21,183	1/1:1,6:8:16.95:115,17,0	1/1:2,5:8:13.97:93,14,0	1/1:7,25:33:61.65:442,62,0	1/1:6,16:25:31.03:323,31,0	1/1:8,12:19:42.18:303,42,0	1/1:0,8:8:20.88:153,21,0	1/1:3,8:11:20.87:153,21,0	0/0:4,0:4:9.01:0,9,87	0/0:8,0:8:21.01:0,21,193	0/0:11,0:11:21.01:0,21,193	1/1:2,7:9:14.89:109,15,0	1/1:2,11:13:6.62:211,7,0	1/1:8,21:29:63.53:461,64,0	0/1:2,9:11:7.81:73,0,8
chr10	83809447	.	G	GTCAC	3179.51	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.956;DP=547;FS=11.030;HRun=0;HaplotypeScore=117.4237;InbreedingCoeff=0.9834;MQ=83.17;MQ0=0;MQRankSum=-10.983;QD=61.14;ReadPosRankSum=3.035;VQSLOD=5.4862;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:36.84:834,37,0	0/0:7,0:7:21.07:0,21,441	0/0:17,0:17:41.63:0,42,774	0/0:18,0:18:54.12:0,54,969	0/0:17,0:17:48.16:0,48,1007	0/0:17,0:17:51.16:0,51,997	0/0:25,0:25:75.25:0,75,1511	0/0:33,0:33:96.32:0,96,1939	0/0:27,0:27:75.26:0,75,1573	0/0:28,0:28:84.29:0,84,1736	0/0:18,0:18:51.16:0,51,1008	0/0:32,0:32:93.30:0,93,1847	0/0:15,0:15:45.15:0,45,944	0/0:22,0:22:66.21:0,66,1312	0/0:25,0:24:72.25:0,72,1486	0/0:33,0:33:99:0,99,2077	0/0:22,0:22:66.22:0,66,1346	1/1:0,6:6:18.06:414,18,0	0/0:29,0:29:87.29:0,87,1749	0/0:19,0:19:57.18:0,57,1144	0/0:20,0:20:60.21:0,60,1254	0/0:12,0:12:33.11:0,33,692	0/0:12,0:12:36.12:0,36,753	0/0:31,0:31:90.31:0,90,1887	1/1:2,12:14:42.14:894,42,0	1/1:2,13:15:45.15:1010,45,0	0/0:16,0:16:48.16:0,48,989	1/1:0,3:3:9.03:198,9,0
chr10	83809449	.	G	GCTTT	1990.30	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.389;DP=551;FS=7.579;HRun=0;HaplotypeScore=123.1166;InbreedingCoeff=0.9550;MQ=83.60;MQ0=0;MQRankSum=-11.301;QD=39.03;ReadPosRankSum=4.532;VQSLOD=3.4866;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:15:5.30:519,5,0	0/0:8,0:8:24.07:0,24,465	0/0:18,0:18:51.03:0,51,886	0/0:18,0:18:50.38:0,50,999	0/0:17,0:17:51.18:0,51,1057	0/0:16,0:16:48.16:0,48,1006	0/0:26,0:26:72.25:0,72,1505	0/0:33,0:33:96.31:0,96,1912	0/0:27,0:27:81.28:0,81,1675	0/0:29,0:29:87.28:0,87,1720	0/0:18,0:18:51.16:0,51,1019	0/0:30,0:30:90.30:0,90,1816	0/0:17,0:17:51.15:0,51,994	0/0:20,0:20:60.21:0,60,1221	0/0:26,0:25:75.26:0,75,1526	0/0:33,0:33:99:0,99,2077	0/0:23,0:23:63.22:0,63,1322	1/1:0,6:6:18.06:297,18,0	0/0:31,0:31:90.30:0,90,1833	0/0:19,0:19:54.17:0,54,1092	0/0:20,0:20:60.21:0,60,1257	0/0:12,0:12:36.12:0,36,730	0/0:12,0:12:36.12:0,36,755	0/0:31,0:31:93.32:0,93,1936	1/1:2,12:14:39.13:560,39,0	1/1:0,13:13:39.13:640,39,0	0/0:16,0:16:48.16:0,48,975	1/1:0,3:3:9.03:139,9,0
chr10	83809452	.	AT	A	923.94	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.738;DP=550;FS=14.036;HRun=1;HaplotypeScore=92.1721;InbreedingCoeff=0.9850;MQ=82.88;MQ0=0;MQRankSum=-11.619;QD=17.11;ReadPosRankSum=3.517;VQSLOD=2.7412;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:15:38.67:283,39,0	0/0:8,0:8:24.08:0,24,383	0/0:17,1:18:51.14:0,51,757	0/0:17,0:17:51.15:0,51,759	0/0:17,0:17:51.16:0,51,792	0/0:16,0:16:45.14:0,45,696	0/0:29,0:29:87.22:0,87,1267	0/0:33,0:33:96.31:0,96,1492	0/0:27,0:27:81.28:0,81,1295	0/0:27,0:27:81.28:0,81,1282	0/0:17,0:17:51.17:0,51,814	0/0:29,0:29:87.26:0,87,1313	0/0:17,0:17:51.17:0,51,815	0/0:21,0:21:63.18:0,63,948	0/0:25,0:24:75.26:0,75,1197	0/0:35,0:35:99:0,105,1671	0/0:23,0:23:69.24:0,69,1100	1/1:2,6:8:23.90:186,24,0	0/0:28,0:28:81.28:0,81,1295	0/0:19,0:19:57.18:0,57,876	0/0:18,0:18:54.18:0,54,857	0/0:13,0:13:39.12:0,39,598	0/0:12,0:12:36.12:0,36,562	0/0:32,0:32:96.26:0,96,1471	1/1:1,13:14:41.50:279,42,0	1/1:0,13:13:38.75:285,39,0	0/0:15,0:15:45.11:0,45,661	1/1:1,3:4:8.93:63,9,0
chr10	83809463	.	A	AT	3570.67	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.495;DP=596;FS=12.627;HRun=1;HaplotypeScore=91.9001;InbreedingCoeff=0.9972;MQ=80.88;MQ0=0;MQRankSum=-13.526;QD=39.24;ReadPosRankSum=0.578;VQSLOD=2.8869;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:72.24:1076,72,0	0/0:8,0:8:24.05:0,24,294	0/0:17,0:17:44.87:0,45,536	0/0:17,0:17:51.17:0,51,662	0/0:22,0:22:66.21:0,66,857	0/0:18,0:17:54.18:0,54,701	0/0:26,0:26:75.22:0,75,958	0/0:33,0:33:96.30:0,96,1223	0/0:26,0:26:78.25:0,78,1013	0/0:27,0:27:78.25:0,78,1007	0/0:21,0:21:57.19:0,57,740	0/0:27,0:27:78.25:0,78,1012	0/0:20,0:20:60.19:0,60,777	0/0:18,0:18:54.18:0,54,701	0/0:30,0:29:90.26:0,90,1138	0/0:31,0:31:93.30:0,93,1207	0/0:21,0:21:63.18:0,63,801	1/1:0,10:10:26.12:366,26,0	0/0:29,0:29:81.26:0,81,1049	0/0:25,0:25:72.22:0,72,916	0/0:17,0:17:51.17:0,51,662	0/0:12,0:12:30.10:0,30,389	0/0:12,0:12:36.12:0,36,467	0/0:31,0:31:90.29:0,90,1166	1/1:0,23:23:63.17:917,63,0	1/1:1,21:22:63.21:943,63,0	0/0:17,0:17:48.14:0,48,608	1/1:1,6:7:18.06:269,18,0
chr10	83810076	.	G	GAAAC	7205.71	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-0.914;DP=730;FS=0.000;HRun=0;HaplotypeScore=126.1720;InbreedingCoeff=0.9992;MQ=66.67;MQ0=0;MQRankSum=-10.256;QD=55.86;ReadPosRankSum=0.633;VQSLOD=5.6904;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,24:35:78.27:1886,78,0	0/0:14,0:14:39.11:0,39,639	0/0:25,0:26:37.04:0,37,671	0/0:18,0:18:26.76:0,27,462	0/0:26,0:26:69.22:0,69,1148	0/0:16,0:16:39.09:0,39,583	0/0:35,0:35:81.26:0,81,1351	0/0:38,0:38:84.26:0,84,1377	0/0:22,0:21:57.20:0,57,977	0/0:31,0:31:69.23:0,69,1162	0/0:21,0:21:57.18:0,57,944	0/0:21,0:21:60.21:0,60,1020	0/0:28,0:28:75.24:0,75,1257	0/0:29,0:29:69.20:0,69,1109	0/0:25,0:25:54.18:0,54,927	0/0:21,0:21:60.19:0,60,999	0/0:25,0:25:54.12:0,54,867	1/1:13,15:28:66.03:1489,66,0	0/0:36,0:36:81.25:0,81,1313	0/0:17,0:17:33.09:0,33,533	0/0:39,0:39:99:0,105,1742	0/0:31,0:31:87.30:0,87,1485	0/0:24,0:24:60.19:0,60,997	0/0:27,0:27:69.24:0,69,1178	1/1:5,15:20:54.18:1287,54,0	1/1:16,21:37:81.27:1940,81,0	0/0:31,0:30:75.26:0,75,1277	1/1:1,8:9:24.08:603,24,0
chr10	83810117	.	TG	T	2824.22	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.799;DP=702;FS=4.356;HRun=5;HaplotypeScore=80.1782;InbreedingCoeff=0.9990;MQ=80.15;MQ0=0;MQRankSum=-9.889;QD=23.54;ReadPosRankSum=1.023;VQSLOD=2.6276;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,35:39:77.89:795,78,0	0/0:12,0:12:36.12:0,36,492	0/0:23,0:23:57.18:0,57,736	0/0:19,0:19:48.14:0,48,629	0/0:31,0:31:90.28:0,90,1208	0/0:15,0:15:45.13:0,45,585	0/0:26,0:26:72.24:0,72,983	0/0:24,0:24:66.19:0,66,858	0/0:22,0:22:66.22:0,66,902	0/0:30,0:30:84.27:0,84,1136	0/0:13,0:13:39.13:0,39,533	0/0:30,0:30:84.28:0,84,1149	0/0:25,0:25:72.24:0,72,985	0/0:28,0:28:78.26:0,78,1065	0/0:21,0:21:63.21:0,63,861	0/0:20,0:20:54.18:0,54,739	0/0:26,0:26:75.23:0,75,1009	1/1:4,20:24:57.10:631,57,0	0/0:30,0:30:84.24:0,84,1115	0/0:24,0:24:69.18:0,69,877	0/0:33,0:33:90.24:0,90,1152	0/0:39,0:39:99:0,108,1428	0/0:24,0:24:66.19:0,66,875	0/0:34,0:34:99:0,99,1339	1/1:1,18:19:39.11:442,39,0	1/1:5,25:30:81.19:893,81,0	0/0:33,0:31:99:0,99,1331	1/1:1,7:8:21.06:238,21,0
chr10	83811451	.	CGGGGGGG	C	2897.98	PASS	AC=8;AF=0.174;AN=46;BaseQRankSum=0.591;DP=188;FS=2.484;HRun=13;HaplotypeScore=48.4731;InbreedingCoeff=0.6469;MQ=77.22;MQ0=0;MQRankSum=-8.175;QD=40.25;ReadPosRankSum=6.041;VQSLOD=1.4155;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:3.01:0,3,43	0/0:2,0:2:3.01:0,3,101	0/0:16,0:7:15.04:0,15,284	0/0:11,0:8:14.33:0,14,132	./.	./.	0/0:11,0:12:27.09:0,27,712	0/0:1,0:1:0:0,0,0	0/0:3,0:3:3.37:0,3,17	0/0:9,0:9:21.01:0,21,268	./.	0/0:4,0:4:7.58:0,8,102	./.	0/0:1,0:1:0:0,0,0	0/0:4,0:4:12.04:0,12,325	0/0:8,0:8:24.08:0,24,731	0/0:12,0:13:26.91:0,27,606	1/1:2,24:26:45.06:916,45,0	0/0:2,0:2:3.01:0,3,35	0/0:4,0:3:6.02:0,6,112	0/0:5,0:5:9.03:0,9,112	./.	0/0:2,0:2:0:0,0,0	0/0:4,0:4:9.50:0,10,142	1/1:3,14:17:30.09:661,30,0	1/1:2,13:15:39.10:802,39,0	0/0:2,0:2:3.01:0,3,76	1/1:4,10:14:30.09:660,30,0
chr10	83813646	.	AT	A	400.02	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=4.997;DP=394;FS=22.014;HRun=3;HaplotypeScore=44.4783;InbreedingCoeff=0.8439;MQ=79.29;MQ0=18;MQRankSum=-0.736;QD=9.76;ReadPosRankSum=1.471;VQSLOD=-0.1091;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:42.61:0,43,594	0/0:10,0:10:27.04:0,27,341	0/0:68,0:21:30.15:0,30,460	0/0:55,0:16:24.39:0,24,220	0/0:13,0:13:23.93:0,24,341	0/0:8,0:8:21.07:0,21,302	0/0:13,0:13:30.07:0,30,375	0/0:16,0:16:33.11:0,33,472	0/0:8,0:8:21.07:0,21,298	0/0:12,0:12:24.08:0,24,345	0/0:9,0:9:23.86:0,24,292	0/0:8,0:8:8.85:0,9,107	0/0:3,0:3:6.02:0,6,86	0/0:6,0:6:15.03:0,15,192	0/0:13,0:13:29.74:0,30,382	0/0:3,0:3:3.01:0,3,43	0/0:13,0:13:36.11:0,36,498	1/1:21,0:21:41.74:278,42,0	0/0:10,0:10:24.06:0,24,307	0/0:14,0:13:26.93:0,27,387	0/0:13,0:13:23.90:0,24,277	./.	0/0:8,0:8:14.98:0,15,197	0/0:9,0:9:12.04:0,12,173	1/1:8,3:11:10.11:102,10,0	1/1:8,1:9:21.29:154,21,0	0/0:11,0:11:27.06:0,27,345	./.
chr10	83813647	.	TTTA	T	889.47	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=2.075;DP=387;FS=3.932;HRun=0;HaplotypeScore=51.9079;InbreedingCoeff=0.8645;MQ=77.44;MQ0=18;MQRankSum=0.493;QD=22.24;ReadPosRankSum=1.838;VQSLOD=3.0727;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:42.59:0,43,653	0/0:10,0:10:28.58:0,29,346	0/0:66,0:19:31.40:0,31,558	0/0:55,0:16:17.24:0,17,213	0/0:14,0:14:26.36:0,26,456	0/0:8,0:8:21.07:0,21,424	0/0:13,0:13:25.90:0,26,342	0/0:13,0:13:33.51:0,34,461	0/0:8,0:8:21.06:0,21,357	0/0:12,0:12:24.53:0,25,390	0/0:9,0:9:20.86:0,21,269	0/0:8,0:8:9.02:0,9,160	0/0:3,0:3:9.03:0,9,149	0/0:5,0:5:15.02:0,15,197	0/0:13,0:13:21.28:0,21,420	0/0:3,0:3:3.01:0,3,52	0/0:13,0:13:36.07:0,36,502	1/1:20,0:20:40.34:487,40,0	0/0:11,0:10:24.04:0,24,341	0/0:13,0:12:29.50:0,30,405	0/0:13,0:13:23.91:0,24,267	./.	0/0:8,0:8:15.04:0,15,242	0/0:9,0:9:12.04:0,12,235	1/1:11,0:11:15.61:224,16,0	1/1:2,7:9:17.54:315,18,0	0/0:10,0:10:29.93:0,30,397	./.
chr10	83814275	.	AGT	A	435.80	PASS	AB=0.898;AC=26;AF=0.542;AN=48;BaseQRankSum=6.374;DP=643;FS=0.000;HRun=0;HaplotypeScore=103.1247;InbreedingCoeff=0.2738;MQ=70.58;MQ0=8;MQRankSum=-1.363;QD=1.18;ReadPosRankSum=-0.355;VQSLOD=1.8558;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:0:0,0,0	./.	./.	./.	0/1:22,5:27:29.75:30,0,298	0/0:11,1:22:15:0,15,146	0/1:25,2:27:5.86:27,0,6	0/0:25,0:24:5.92:0,6,40	0/0:26,0:27:15.94:0,16,340	0/1:25,0:25:4.28:11,0,4	1/1:18,0:18:2.79:17,3,0	0/0:28,3:31:9.65:0,10,456	0/0:19,0:21:7.02:0,7,233	0/0:26,0:26:9.69:0,10,396	1/1:21,1:22:11.24:60,11,0	1/1:16,0:16:11.29:78,11,0	1/1:20,0:20:5.62:31,6,0	1/1:20,0:26:7.68:64,8,0	1/1:18,0:18:4.77:17,5,0	./.	0/1:41,0:39:14.84:15,0,32	0/1:13,4:16:50.03:50,0,77	0/0:10,0:16:9.01:0,9,108	0/1:37,11:49:99:102,0,514	1/1:6,0:15:8.60:47,9,0	1/1:20,0:21:3.31:15,3,0	1/1:13,0:13:0.76:6,1,0	1/1:12,0:14:5.21:22,5,0
chr10	83814313	.	TGTGTGTGC	T	2610.63	PASS	AB=0.963;AC=23;AF=0.442;AN=52;BaseQRankSum=7.707;DP=571;FS=10.019;HRun=0;HaplotypeScore=162.1937;InbreedingCoeff=0.2914;MQ=55.13;MQ0=9;MQRankSum=-0.809;QD=8.11;ReadPosRankSum=-0.089;VQSLOD=1.5350;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:23:42.75:335,43,0	1/1:6,0:6:14.88:113,15,0	./.	./.	0/0:24,0:24:57.03:0,57,1384	0/0:22,0:22:30.32:0,30,514	1/1:24,0:23:11.65:305,12,0	0/1:22,0:22:20.55:339,0,21	0/0:28,0:28:74.78:0,75,1462	1/1:24,0:23:20.27:333,20,0	1/1:21,1:22:3.05:26,3,0	0/0:33,0:33:81.07:0,81,1984	0/0:20,0:20:56.88:0,57,1188	0/0:18,0:18:50.99:0,51,1116	0/1:20,0:20:20.08:20,0,47	0/1:8,8:15:5.17:115,0,5	1/1:25,1:26:3.76:106,4,0	0/1:24,0:24:99:140,0,108	1/1:18,0:16:14.89:295,15,0	0/0:12,0:12:2.99:0,3,23	0/1:54,0:52:1.42:420,0,1	0/0:19,0:19:38.96:0,39,654	0/0:19,0:19:29.91:0,30,630	0/0:46,0:45:96:0,96,2560	0/1:18,0:18:9.70:95,0,10	0/1:12,0:12:37.06:37,0,78	0/1:8,0:8:29.05:56,0,29	0/1:4,0:4:5.97:53,0,6
chr10	83814315	.	TGTGTGC	T	3075.75	PASS	AB=1.000;AC=29;AF=0.558;AN=52;BaseQRankSum=5.960;DP=563;FS=6.196;HRun=0;HaplotypeScore=142.7176;InbreedingCoeff=0.6150;MQ=55.36;MQ0=8;MQRankSum=0.991;QD=9.29;ReadPosRankSum=-1.428;VQSLOD=1.6995;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:42.34:334,42,0	1/1:6,0:6:14.88:113,15,0	./.	./.	0/0:23,0:23:42.72:0,43,978	0/0:22,0:22:30.32:0,30,436	1/1:28,0:27:59.19:506,59,0	1/1:21,0:21:9.88:354,10,0	0/0:28,0:28:65.46:0,65,1117	1/1:6,18:23:38.66:483,39,0	1/1:3,18:21:3.21:70,3,0	0/0:32,0:32:79.12:0,79,1503	0/0:20,0:20:50.50:0,51,881	0/0:19,0:19:45.03:0,45,874	1/1:19,0:19:11.40:106,11,0	1/1:13,2:14:12.02:208,12,0	1/1:5,22:27:5.63:121,6,0	0/1:24,0:24:80.76:81,0,123	1/1:18,0:16:32.87:282,33,0	0/1:12,0:12:0:0,0,0	1/1:53,0:51:21.93:461,22,0	0/0:19,0:19:35.58:0,36,416	0/0:18,0:18:32.81:0,33,520	0/0:46,0:45:82.36:0,82,1889	0/1:18,0:18:9.92:73,0,10	0/1:12,0:12:3.79:4,0,78	1/1:8,0:8:1.25:35,1,0	0/1:4,0:4:6.01:37,0,6
chr10	83814317	.	TGTGCGTGC	T	3586.98	PASS	AB=0.883;AC=25;AF=0.481;AN=52;BaseQRankSum=2.833;DP=566;FS=5.124;HRun=0;HaplotypeScore=154.1625;InbreedingCoeff=0.4014;MQ=55.79;MQ0=7;MQRankSum=0.383;QD=11.42;ReadPosRankSum=-1.909;VQSLOD=2.1486;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:19:43.03:663,43,0	1/1:8,0:8:8.72:36,9,0	./.	./.	0/0:26,0:26:54.18:0,54,1548	0/0:20,0:20:24.08:0,24,568	0/1:27,0:26:14.71:27,0,15	1/1:22,0:22:51.15:859,51,0	0/0:30,0:30:66.21:0,66,1654	0/1:23,0:22:15.08:67,0,15	1/1:20,0:20:3.04:14,3,0	0/0:31,0:31:76.49:0,76,2080	0/0:20,0:20:51.17:0,51,1324	0/0:22,0:22:48.16:0,48,1149	0/1:4,0:20:22.85:23,0,68	1/1:14,0:13:8.65:91,9,0	1/1:26,0:26:3.97:76,4,0	0/1:23,0:23:38.34:38,0,306	1/1:3,15:17:44.71:654,45,0	0/1:4,6:10:0:0,0,0	1/1:52,0:50:55.98:893,56,0	0/0:19,0:19:33.11:0,33,744	0/0:19,0:19:36.10:0,36,798	0/0:47,0:47:99:0,99,2833	0/1:18,0:18:43.95:44,0,47	0/0:12,0:12:3.16:0,3,196	1/1:2,6:8:3.46:83,3,0	0/1:5,0:5:17.61:18,0,61
chr10	83814325	.	CGT	C	200.22	PASS	AB=0.936;AC=17;AF=0.327;AN=52;BaseQRankSum=9.900;DP=541;FS=7.035;HRun=0;HaplotypeScore=113.1186;InbreedingCoeff=0.5284;MQ=56.71;MQ0=4;MQRankSum=-4.946;QD=1.07;ReadPosRankSum=0.831;VQSLOD=1.7725;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,1:19:9.46:57,9,0	0/0:8,0:8:23.34:0,23,137	./.	./.	0/0:19,0:19:56.37:0,56,953	0/0:17,0:17:30.10:0,30,532	0/0:28,0:28:64.20:0,64,409	0/0:19,0:19:2.69:0,3,51	0/0:27,0:27:75.18:0,75,1317	0/0:22,0:21:46.66:0,47,297	0/0:20,0:20:4.17:0,4,27	0/0:32,0:32:79.60:0,80,1356	0/0:22,0:22:55.64:0,56,970	0/0:19,0:19:53.88:0,54,813	0/1:19,0:19:14.70:15,0,69	1/1:13,0:12:1.21:9,1,0	0/0:28,0:28:11.16:0,11,123	1/1:23,0:23:26.30:135,26,0	0/1:15,0:15:10.26:10,0,49	0/1:6,0:6:0:0,0,0	0/1:26,23:48:1.43:1,0,20	0/0:19,0:19:39.10:0,39,644	0/0:23,0:23:51:0,51,783	0/0:45,0:44:99:0,102,1745	1/1:17,0:17:8.96:50,9,0	1/1:13,0:13:6.74:35,7,0	0/1:7,0:7:6.50:7,0,19	1/1:7,0:7:8.75:42,9,0
chr10	83814530	.	CAGG	C	6242.01	PASS	AB=0.638;AC=32;AF=0.571;AN=56;BaseQRankSum=11.460;DP=559;FS=21.385;HRun=0;HaplotypeScore=88.2737;InbreedingCoeff=0.8072;MQ=65.09;MQ0=1;MQRankSum=-2.284;QD=19.51;ReadPosRankSum=4.040;VQSLOD=2.8949;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,27:38:60.20:843,60,0	1/1:0,1:1:3.01:42,3,0	0/0:26,0:19:29.77:0,30,481	0/0:33,0:26:14.73:0,15,532	0/0:20,0:20:42.14:0,42,842	0/0:21,0:21:45.14:0,45,867	1/1:13,12:24:27.09:379,27,0	1/1:10,8:18:24.08:337,24,0	0/0:20,0:20:45.15:0,45,903	1/1:7,4:11:12.04:169,12,0	1/1:4,5:9:15.05:211,15,0	0/0:28,0:28:66.23:0,66,1285	0/0:20,0:20:42.11:0,42,771	0/0:22,0:22:60.21:0,60,1181	1/1:5,15:20:39.13:548,39,0	0/1:3,18:21:6.01:663,0,6	1/1:5,23:28:63.21:885,63,0	1/1:11,0:19:11.03:82,11,0	0/1:9,5:14:14.96:230,0,15	1/1:6,4:10:12.04:169,12,0	1/1:10,35:45:84.28:1181,84,0	0/0:14,0:14:33.11:0,33,649	0/0:10,0:10:15.05:0,15,286	0/0:24,0:24:51.18:0,51,1023	1/1:4,0:16:14.88:105,15,0	1/1:15,0:25:29.76:210,30,0	1/1:10,4:14:6.02:84,6,0	1/1:0,0:6:14.88:105,15,0
chr10	83814978	.	GTT	G	1657.85	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=3.162;DP=440;FS=7.763;HRun=14;HaplotypeScore=69.4826;InbreedingCoeff=0.9368;MQ=81.70;MQ0=2;MQRankSum=-1.335;QD=17.45;ReadPosRankSum=6.254;VQSLOD=2.5168;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,18:31:25.02:399,25,0	0/0:2,0:7:12.02:0,12,115	0/0:22,0:15:21.39:0,21,198	0/0:17,0:12:5.98:0,6,53	0/0:24,0:24:55.51:0,56,723	0/0:17,0:18:50.65:0,51,674	0/0:2,0:10:21.02:0,21,196	0/0:23,0:29:59.63:0,60,706	0/0:16,0:16:33.11:0,33,462	0/0:8,0:22:57.06:0,57,576	0/0:5,0:14:29.89:0,30,292	0/0:8,0:8:12.04:0,12,168	0/0:4,0:6:14.02:0,14,143	0/0:10,0:13:22.87:0,23,268	0/0:6,0:15:23.51:0,24,227	0/0:3,0:10:12.02:0,12,128	0/0:6,0:21:36.55:0,37,376	1/1:1,15:16:39.03:361,39,0	0/0:25,0:29:68.67:0,69,852	0/0:11,0:11:30.09:0,30,398	0/0:7,0:7:12.04:0,12,157	0/0:7,0:7:18.06:0,18,252	0/0:14,0:15:38.60:0,39,494	0/0:7,0:9:18.02:0,18,221	1/1:2,13:15:29.97:277,30,0	1/1:2,10:12:30.01:273,30,0	0/0:14,0:15:30.47:0,30,375	1/1:3,17:21:59.54:523,60,0
chr10	83816006	.	G	GAA	2106.14	PASS	AB=0.839;AC=20;AF=0.357;AN=56;BaseQRankSum=4.709;DP=560;FS=0.463;HRun=14;HaplotypeScore=94.1685;InbreedingCoeff=0.6833;MQ=52.89;MQ0=19;MQRankSum=-5.101;QD=9.40;ReadPosRankSum=-7.248;VQSLOD=-0.1513;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:38:32.78:100,0,33	0/0:3,0:7:13.79:0,14,71	1/1:7,0:2:0.89:2,1,0	0/0:17,0:7:2.07:0,2,24	0/0:23,0:26:30.02:0,30,272	0/0:24,0:23:38.55:0,39,326	0/0:23,0:23:44.71:0,45,376	1/1:17,10:26:42.88:428,43,0	0/0:17,0:16:35.79:0,36,300	0/0:22,0:22:20.46:0,20,173	0/0:21,0:21:2.43:0,2,175	0/0:19,0:19:20.56:0,21,175	0/0:17,0:17:19.85:0,20,159	0/0:14,0:15:14.31:0,14,153	0/0:21,0:23:26.78:0,27,306	0/0:18,0:19:35.51:0,36,295	0/0:24,0:25:49.05:0,49,393	1/1:9,3:19:0.14:206,0,0	1/1:11,8:19:34.31:312,34,0	1/1:9,7:17:1.12:205,1,0	1/1:5,5:12:14.99:168,15,0	0/0:11,0:13:23.65:0,24,200	0/0:22,0:21:13.38:0,13,123	0/0:18,0:19:35.08:0,35,306	1/1:11,6:17:20.58:172,21,0	1/1:14,12:28:52.21:452,52,0	0/1:10,2:18:1.72:179,0,2	1/1:3,1:3:6.01:68,6,0
chr10	83816029	.	G	GAAAA	937.79	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.970;DP=581;FS=4.065;HRun=6;HaplotypeScore=106.1489;InbreedingCoeff=0.8068;MQ=58.55;MQ0=14;MQRankSum=-2.590;QD=19.14;ReadPosRankSum=0.245;VQSLOD=-0.1915;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,40:46:51.11:1032,51,0	0/0:10,0:9:24.05:0,24,333	0/0:14,0:6:10.50:0,10,102	0/0:29,0:14:4.38:0,4,133	0/0:28,0:28:68.76:0,69,924	0/0:20,0:20:51.14:0,51,746	0/0:26,0:26:71.39:0,71,972	0/0:32,0:30:12.94:0,13,428	0/0:18,0:18:51.09:0,51,758	0/0:20,0:20:50.50:0,50,690	0/0:25,0:24:47.47:0,47,595	0/0:16,0:16:45.01:0,45,612	0/0:9,0:9:21.06:0,21,311	0/0:21,0:20:52.61:0,53,683	0/0:22,0:22:50.98:0,51,665	0/0:21,0:21:61.39:0,61,816	0/0:27,0:27:81.19:0,81,1157	0/0:16,0:15:28.70:0,29,213	0/0:25,0:24:25.27:0,25,603	0/0:16,0:16:30.75:0,31,331	0/0:14,0:14:23.91:0,24,233	0/0:15,0:15:39.08:0,39,547	0/0:19,0:16:34.74:0,35,464	0/0:19,0:19:45:0,45,605	0/0:23,0:21:40.42:0,40,430	0/0:23,0:22:35.69:0,36,402	0/0:17,0:16:27.35:0,27,282	0/0:6,0:5:14.80:0,15,145
chr10	83817649	.	TC	T	1045.53	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=11.468;DP=634;FS=8.828;HRun=3;HaplotypeScore=81.0253;InbreedingCoeff=0.9994;MQ=93.76;MQ0=0;MQRankSum=-10.220;QD=16.60;ReadPosRankSum=-0.742;VQSLOD=2.5303;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1544	0/0:10,0:10:27.08:0,27,372	0/0:31,0:31:53.10:0,53,1112	0/0:29,0:29:58.40:0,58,852	0/0:13,0:13:39.09:0,39,508	0/0:17,0:17:51.17:0,51,730	0/0:16,0:16:48.13:0,48,651	0/0:24,0:24:69.23:0,69,993	0/0:18,0:18:54.18:0,54,778	0/0:35,0:35:99:0,102,1420	0/0:12,0:12:36.10:0,36,484	0/0:21,0:21:60.18:0,60,830	0/0:17,0:17:51.16:0,51,715	0/0:23,0:23:69.19:0,69,962	0/0:24,0:24:72.24:0,72,1037	0/0:23,0:23:69.21:0,69,973	0/0:39,0:39:99:0,114,1635	1/1:3,16:19:39.46:345,39,0	0/0:19,0:19:54.17:0,54,777	0/0:20,0:20:51.17:0,51,734	0/0:54,0:54:99:0,150,2141	0/0:19,0:19:57.18:0,57,803	0/0:18,0:18:51.16:0,51,715	0/0:30,0:30:87.29:0,87,1250	1/1:2,13:15:32.90:255,33,0	1/1:5,24:29:34.59:587,35,0	0/0:21,0:21:60.20:0,60,863	./.
chr10	83817653	.	TAGCCA	T	2371.42	PASS	AB=0.538;AC=5;AF=0.093;AN=54;BaseQRankSum=11.613;DP=621;FS=14.607;HRun=0;HaplotypeScore=130.2920;InbreedingCoeff=0.7891;MQ=91.57;MQ0=0;MQRankSum=-10.854;QD=40.19;ReadPosRankSum=-0.710;VQSLOD=2.6163;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,3186	0/0:9,0:9:27.09:0,27,852	0/0:28,0:28:78.27:0,78,2231	0/0:23,0:24:55.14:0,55,1602	0/0:13,0:13:39.13:0,39,1237	0/0:17,0:17:51.18:0,51,1596	0/0:14,0:14:42.14:0,42,1286	0/0:26,0:26:72.25:0,72,2164	0/0:21,0:21:63.22:0,63,1878	0/0:35,0:35:99:0,102,3059	0/0:12,0:12:36.12:0,36,1132	0/0:21,0:21:60.19:0,60,1818	0/0:17,0:17:45.15:0,45,1425	0/0:23,0:23:66.23:0,66,2068	0/0:24,0:24:69.24:0,69,2123	0/0:22,0:22:66.23:0,66,2059	0/0:39,0:39:99:0,108,3325	1/1:6,12:18:39.13:676,39,0	0/0:19,0:19:54.16:0,54,1553	0/0:20,0:20:60.21:0,60,1860	0/0:52,0:52:99:0,157,4763	0/0:18,0:18:54.17:0,54,1613	0/0:18,0:18:54.19:0,54,1664	0/0:32,0:32:96.32:0,96,2957	1/1:0,13:13:36.33:575,36,0	0/1:4,24:28:13.94:1250,0,14	0/0:22,0:22:60.21:0,60,1855	./.
chr10	83819882	.	T	TG	1741.71	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-7.693;DP=516;FS=4.338;HRun=6;HaplotypeScore=54.2773;InbreedingCoeff=0.9450;MQ=86.99;MQ0=0;MQRankSum=-0.352;QD=26.00;ReadPosRankSum=2.159;VQSLOD=4.0170;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.15:0,72,732	0/0:6,0:6:18.04:0,18,184	0/0:21,0:21:24.25:0,24,446	0/0:17,0:18:47.12:0,47,456	0/0:21,0:21:35.72:0,36,335	0/0:16,0:16:39.08:0,39,396	0/0:24,0:24:60.13:0,60,611	0/0:18,0:18:45.10:0,45,456	0/0:22,0:22:60.13:0,60,611	0/0:18,0:18:42.09:0,42,428	0/0:14,0:14:36.07:0,36,364	0/0:17,0:17:51.11:0,51,520	0/0:18,0:18:54.11:0,54,543	0/0:16,0:16:39.08:0,39,394	0/0:14,0:14:39.09:0,39,398	0/0:20,0:20:48.10:0,48,490	0/0:25,0:25:66.14:0,66,673	1/1:2,20:22:54.17:679,54,0	0/0:19,0:19:48.10:0,48,482	0/0:16,0:16:36.07:0,36,367	0/0:25,0:25:72.09:0,72,708	0/0:18,0:18:45.10:0,45,457	0/0:23,0:23:54.10:0,54,541	0/0:18,0:18:51.11:0,51,520	1/1:1,13:14:33.11:415,33,0	1/1:6,10:16:2.82:346,3,0	0/0:16,0:16:45.07:0,45,445	1/1:3,12:15:36.12:453,36,0
chr10	83822745	.	TTCTCTCTC	T	286.44	PASS	AB=1.000;AC=9;AF=0.225;AN=40;BaseQRankSum=2.923;DP=488;FS=1.465;HRun=0;HaplotypeScore=120.5254;InbreedingCoeff=0.4543;MQ=64.23;MQ0=21;MQRankSum=-3.332;QD=3.67;ReadPosRankSum=0.520;VQSLOD=2.4217;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:12.04:0,12,418	0/0:10,0:10:3.01:0,3,64	./.	./.	0/0:16,0:16:3.01:0,3,42	1/1:12,4:15:2.80:55,3,0	0/1:21,0:21:32.68:49,0,33	0/0:34,0:34:0.89:0,1,2	1/1:12,3:15:3.01:65,3,0	0/0:26,0:26:25.89:0,26,708	./.	0/0:5,0:7:9.03:0,9,174	0/0:15,0:15:15.03:0,15,193	0/0:14,0:19:18.01:0,18,238	0/0:19,0:19:6.02:0,6,207	0/0:3,0:11:3.01:0,3,103	0/0:23,0:23:18.06:0,18,438	0/0:16,0:16:17.98:0,18,330	0/0:22,0:21:6:0,6,52	1/1:9,0:10:2.96:19,3,0	./.	0/0:13,0:13:9.03:0,9,135	./.	0/0:15,0:17:18.01:0,18,199	./.	./.	1/1:12,4:16:9.03:218,9,0	./.
chr10	83822752	.	T	TCC	1819.01	PASS	AB=0.906;AC=16;AF=0.308;AN=52;BaseQRankSum=-0.322;DP=519;FS=11.232;HRun=1;HaplotypeScore=77.3437;InbreedingCoeff=0.5271;MQ=56.44;MQ0=31;MQRankSum=0.666;QD=9.62;ReadPosRankSum=3.586;VQSLOD=-0.4797;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,23:37:58.27:76,0,58	1/1:8,0:9:2.33:118,2,0	0/0:31,0:10:23.80:0,24,202	0/0:43,0:10:23.89:0,24,202	0/0:19,0:19:41.82:0,42,347	0/0:16,0:15:23.92:0,24,193	1/1:22,0:22:45.49:372,45,0	0/0:32,0:31:86.03:0,86,724	0/0:18,0:17:26.48:0,26,215	0/1:29,0:29:65.38:392,0,65	1/1:15,0:14:32.71:280,33,0	0/0:13,0:13:17.89:0,18,143	0/0:20,0:20:41.53:0,42,347	0/0:23,0:23:41.93:0,42,344	1/1:20,0:20:8.66:226,9,0	1/1:11,0:10:5.48:41,5,0	0/1:20,0:18:15.16:247,0,15	0/1:22,0:22:97.82:214,0,98	0/0:23,0:20:53.18:0,53,428	0/0:9,0:9:26.88:0,27,212	0/0:21,0:21:44.94:0,45,374	0/0:12,0:12:26.86:0,27,219	0/0:13,0:13:26.95:0,27,221	0/0:17,0:17:38.93:0,39,318	./.	1/1:3,0:1:2.99:24,3,0	0/0:17,0:16:38.89:0,39,310	./.
chr10	83823211	.	G	GT	131.61	PASS	AB=0.892;AC=9;AF=0.205;AN=44;BaseQRankSum=4.088;DP=165;FS=5.304;HRun=0;HaplotypeScore=39.2127;InbreedingCoeff=0.3747;MQ=63.50;MQ0=7;MQRankSum=-2.953;QD=2.23;ReadPosRankSum=3.791;VQSLOD=1.2031;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:1.25:0,1,3	1/1:3,1:4:3.91:27,4,0	0/0:10,0:3:9:0,9,84	0/1:12,0:8:4.18:4,0,42	./.	0/0:14,0:13:26.98:0,27,229	0/0:17,0:17:37.13:0,37,244	./.	0/0:3,0:3:5.99:0,6,50	1/1:7,2:9:10.72:79,11,0	0/0:3,0:3:0.92:0,1,2	0/0:6,0:5:11.90:0,12,91	0/0:6,0:6:10.24:0,10,80	0/0:9,0:9:17.91:0,18,142	0/1:7,2:9:11.26:32,0,11	1/1:6,1:6:6.90:32,7,0	0/1:15,2:17:52.34:82,0,52	./.	0/0:3,0:3:5.97:0,6,46	0/0:1,0:1:0:0,0,0	0/0:8,0:8:17.31:0,17,138	0/0:3,0:3:5.99:0,6,50	./.	0/0:6,0:6:12:0,12,105	./.	0/0:0,1:1:1.55:0,2,4	0/0:3,0:3:6:0,6,51	./.
chr10	83823219	.	GGAC	G	1009.58	PASS	AB=1.000;AC=17;AF=0.327;AN=52;BaseQRankSum=7.967;DP=176;FS=2.624;HRun=0;HaplotypeScore=38.2034;InbreedingCoeff=0.7348;MQ=79.20;MQ0=6;MQRankSum=-6.272;QD=15.53;ReadPosRankSum=3.795;VQSLOD=3.2005;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:5:0:0,0,0	1/1:2,0:2:3.48:33,3,0	0/0:12,0:5:15.05:0,15,202	0/0:16,0:12:11.83:0,12,261	0/0:3,0:3:6.02:0,6,80	0/0:12,0:12:27.08:0,27,351	1/1:15,0:15:29.61:301,30,0	0/0:4,0:4:3.01:0,3,45	0/0:3,0:3:9.03:0,9,143	1/1:11,0:11:27.03:289,27,0	1/1:4,0:4:6.02:71,6,0	0/0:6,0:6:15.05:0,15,210	0/0:6,0:6:12.04:0,12,170	0/0:7,0:7:15.01:0,15,180	1/1:7,0:7:11.88:99,12,0	1/1:6,0:5:14.82:123,15,0	1/1:13,1:13:31.41:256,31,0	0/0:0,6:6:0.47:0,0,1	0/0:6,0:6:17.54:0,18,202	0/0:2,0:2:6.02:0,6,77	0/0:9,0:9:21.07:0,21,293	0/0:4,0:4:9.03:0,9,128	0/0:1,0:1:3.01:0,3,38	0/0:8,0:8:21.07:0,21,315	./.	1/1:1,0:1:2.60:10,3,0	0/0:6,0:6:18.05:0,18,228	./.
chr10	83823220	.	GAC	G	1291.39	PASS	AC=18;AF=0.346;AN=52;BaseQRankSum=8.098;DP=164;FS=2.475;HRun=0;HaplotypeScore=32.6715;InbreedingCoeff=0.7515;MQ=82.21;MQ0=4;MQRankSum=-5.868;QD=23.06;ReadPosRankSum=3.763;VQSLOD=3.7471;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:0.47:1,0,0	1/1:1,1:2:3.48:43,3,0	0/0:12,0:5:15.05:0,15,202	0/0:16,0:12:11.26:0,11,245	0/0:4,0:4:9.03:0,9,123	0/0:11,0:11:27.08:0,27,351	1/1:4,8:12:30:325,30,0	0/0:3,0:3:3.01:0,3,45	0/0:3,0:3:9.03:0,9,121	1/1:0,11:11:27.05:322,27,0	1/1:1,3:4:6.02:70,6,0	0/0:5,0:5:15.05:0,15,195	0/0:4,0:4:12.04:0,12,166	0/0:6,0:6:18:0,18,216	1/1:0,4:5:12.02:131,12,0	1/1:2,3:5:15.03:162,15,0	1/1:6,6:13:35.93:401,36,0	0/0:6,0:6:0.47:0,0,1	0/0:7,0:7:20.51:0,21,221	0/0:3,0:3:9.03:0,9,126	0/0:9,0:8:21.07:0,21,270	0/0:4,0:4:9.03:0,9,128	0/0:1,0:1:3.01:0,3,38	0/0:7,0:7:21.07:0,21,299	./.	1/1:1,0:1:2.60:10,3,0	0/0:7,0:7:21.06:0,21,268	./.
chr10	83824467	.	TAGA	T	8837.83	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.311;DP=660;FS=4.248;HRun=0;HaplotypeScore=98.4871;InbreedingCoeff=0.9990;MQ=87.19;MQ0=0;MQRankSum=-4.255;QD=38.59;ReadPosRankSum=3.776;VQSLOD=5.5700;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,47:49:99:1585,100,0	1/1:0,10:10:24.08:391,24,0	0/0:22,0:24:51.20:0,51,1274	0/0:26,0:26:50.93:0,51,1494	0/0:14,0:14:39.13:0,39,855	0/0:17,0:17:48.16:0,48,1072	1/1:2,31:33:84.29:1370,84,0	0/0:28,0:28:72.25:0,72,1599	0/0:25,0:25:72.25:0,72,1589	1/1:3,21:24:63.22:1027,63,0	1/1:0,10:10:24.08:391,24,0	0/0:31,0:31:93.31:0,93,2034	0/0:30,0:30:84.29:0,84,1868	0/0:23,0:23:69.24:0,69,1499	1/1:3,22:25:51.12:830,51,0	1/1:1,26:27:72.25:1170,72,0	1/1:2,28:30:78.27:1270,78,0	1/1:1,20:21:50.95:803,51,0	0/0:20,0:20:57.20:0,57,1271	0/0:16,0:16:48.15:0,48,1030	0/0:28,0:28:84.26:0,84,1791	0/0:19,0:19:57.20:0,57,1271	0/0:13,0:13:36.12:0,36,787	0/0:30,0:30:87.30:0,87,1941	0/0:22,0:22:63.17:0,63,1319	0/0:33,0:33:99:0,99,2172	0/0:24,0:23:72.25:0,72,1593	0/0:8,0:8:24.08:0,24,534
chr10	83825069	.	C	CT	415.62	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=4.235;DP=457;FS=15.433;HRun=7;HaplotypeScore=68.0257;InbreedingCoeff=0.7462;MQ=49.27;MQ0=13;MQRankSum=-1.110;QD=8.84;ReadPosRankSum=-1.137;VQSLOD=0.1764;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:38.82:0,39,367	0/0:6,0:6:8.96:0,9,86	0/0:8,0:2:2.99:0,3,25	0/1:5,0:3:0:0,0,0	0/0:25,0:24:23.65:0,24,231	0/0:17,0:17:24:0,24,231	0/0:9,0:9:11.79:0,12,116	0/0:23,0:23:29.70:0,30,278	0/0:8,0:8:14.99:0,15,138	0/0:19,0:18:27.03:0,27,260	0/0:15,0:15:17.31:0,17,172	0/0:14,0:13:3.98:0,4,182	0/0:15,0:15:14.14:0,14,218	0/0:15,0:15:26.99:0,27,259	0/0:21,0:21:32.87:0,33,311	0/0:18,0:18:24.05:0,24,232	0/0:35,0:33:18.20:0,18,267	0/0:21,0:20:17.03:0,17,220	0/0:12,0:8:21.03:0,21,202	0/0:14,0:14:26.92:0,27,252	0/0:11,0:11:17.99:0,18,173	0/0:14,0:14:8.97:0,9,87	0/0:18,0:18:11.84:0,12,116	0/0:25,0:24:26.85:0,27,259	1/1:9,3:10:6.48:73,6,0	1/1:14,6:19:21.95:255,22,0	0/0:18,0:17:11.46:0,11,115	1/1:4,6:10:18.06:218,18,0
chr10	83826266	.	T	TCA	12024.79	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-14.534;DP=524;FS=6.341;HRun=0;HaplotypeScore=60.9622;InbreedingCoeff=0.9997;MQ=83.95;MQ0=0;MQRankSum=-2.815;QD=50.95;ReadPosRankSum=3.268;VQSLOD=5.8975;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:72.25:1343,72,0	1/1:0,13:13:39.13:730,39,0	0/0:14,0:14:26.07:0,26,410	0/0:19,0:20:44.72:0,45,590	0/0:20,0:20:57.19:0,57,839	0/0:13,0:13:39.13:0,39,574	1/1:0,18:18:42.14:787,42,0	0/0:18,0:18:54.18:0,54,795	0/0:19,0:19:57.18:0,57,819	1/1:1,20:21:63.22:1172,63,0	1/1:1,16:18:51.17:946,51,0	0/0:18,0:18:54.18:0,54,795	0/0:16,0:16:48.16:0,48,707	0/0:23,0:23:69.22:0,69,994	1/1:0,18:18:48.16:898,48,0	1/1:0,13:13:33.11:616,33,0	1/1:1,24:25:66.23:1236,66,0	1/1:0,21:21:63.22:1178,63,0	0/0:15,0:15:42.13:0,42,600	0/0:13,0:13:36.11:0,36,512	0/0:29,0:29:81.27:0,81,1191	0/0:16,0:16:42.14:0,42,618	0/0:14,0:14:42.13:0,42,599	0/0:17,0:17:51.17:0,51,751	1/1:1,20:21:54.19:1011,54,0	1/1:1,27:28:81.22:1434,81,0	0/0:23,0:23:66.21:0,66,953	1/1:0,12:12:36.12:674,36,0
chr10	83830129	.	AGC	A	5481.70	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=11.064;DP=628;FS=2.143;HRun=0;HaplotypeScore=86.6713;InbreedingCoeff=0.8819;MQ=66.78;MQ0=7;MQRankSum=-1.185;QD=22.10;ReadPosRankSum=4.351;VQSLOD=5.2338;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,43:46:66.22:876,66,0	1/1:0,5:5:3.01:40,3,0	0/1:18,0:9:5.81:6,0,126	0/0:13,0:3:2.50:0,2,9	0/0:24,0:24:63.05:0,63,934	0/0:13,0:13:30.03:0,30,453	1/1:0,32:32:57.18:752,57,0	0/0:29,0:29:65.86:0,66,911	0/0:20,0:20:54.18:0,54,900	1/1:1,19:20:54.14:686,54,0	1/1:3,11:14:18.06:231,18,0	0/0:20,0:20:54.08:0,54,843	0/0:22,0:22:60.14:0,60,941	0/0:16,0:16:36.04:0,36,547	1/1:3,21:23:42.14:558,42,0	1/1:1,24:24:47.88:638,48,0	1/1:4,29:33:57.18:758,57,0	1/1:13,18:31:75.13:937,75,0	0/0:21,0:21:51.03:0,51,714	0/0:21,0:21:54.03:0,54,808	0/0:46,0:46:99:0,125,1883	0/0:13,0:13:33.08:0,33,540	0/0:19,0:19:42.14:0,42,717	0/0:37,0:37:99:0,99,1529	0/0:14,0:14:24.08:0,24,346	0/0:24,0:24:60.12:0,60,956	0/0:17,0:17:39.10:0,39,587	0/0:11,0:11:30.10:0,30,493
chr10	83830142	.	GCA	G	1227.57	PASS	AB=0.925;AC=19;AF=0.339;AN=56;BaseQRankSum=7.219;DP=650;FS=9.299;HRun=0;HaplotypeScore=101.6063;InbreedingCoeff=-0.0353;MQ=61.03;MQ0=13;MQRankSum=-1.945;QD=2.92;ReadPosRankSum=-0.136;VQSLOD=1.6389;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:51,2:53:20.74:21,0,623	0/0:8,0:8:5.90:0,6,116	0/0:21,0:8:6.02:0,6,77	0/0:14,0:2:2.90:0,3,16	0/0:21,3:26:16.80:0,17,642	0/1:11,0:11:13.27:13,0,232	1/1:27,9:35:42.03:444,42,0	0/1:27,0:28:14.18:14,0,355	0/1:21,2:23:20.49:20,0,588	0/1:23,2:25:71.86:72,0,463	0/0:9,0:9:7.82:0,8,137	0/0:22,0:22:42.12:0,42,621	0/1:24,2:24:17.47:17,0,638	0/1:14,3:17:0.95:1,0,423	0/1:26,2:27:8.77:9,0,646	0/0:27,0:26:17.15:0,17,536	0/1:32,2:33:13.66:14,0,521	1/1:14,18:34:41.76:428,42,0	0/0:13,0:12:8.99:0,9,113	0/1:16,2:19:18.16:18,0,351	0/1:42,3:45:15.77:16,0,1016	0/0:14,0:14:33.09:0,33,487	0/0:16,0:16:21.04:0,21,450	0/0:34,1:35:31.86:0,32,891	1/1:3,11:15:26.91:289,27,0	0/0:22,0:23:16.67:0,17,666	0/1:12,2:14:4.34:4,0,333	0/1:10,1:10:16.28:16,0,191
chr10	83830414	.	A	AG	355.69	PASS	AB=0.860;AC=6;AF=0.107;AN=56;BaseQRankSum=6.851;DP=564;FS=10.084;HRun=0;HaplotypeScore=80.9032;InbreedingCoeff=0.5652;MQ=54.20;MQ0=25;MQRankSum=-0.352;QD=4.68;ReadPosRankSum=4.931;VQSLOD=2.2815;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:41:99:0,112,1033	0/0:8,0:8:23.90:0,24,277	0/0:36,0:5:11.50:0,12,62	0/1:27,0:8:0.42:0,0,19	0/0:21,0:21:48.78:0,49,313	0/0:16,0:16:41.08:0,41,309	0/0:38,0:38:99:0,100,1034	0/0:26,0:26:61.37:0,61,409	0/0:10,0:10:23.95:0,24,202	0/0:23,0:23:59.66:0,60,530	0/0:13,0:12:35.83:0,36,353	0/0:18,0:18:37.70:0,38,279	0/0:8,0:8:23.74:0,24,174	0/0:13,0:13:35.25:0,35,280	0/0:19,0:18:50.10:0,50,466	0/0:22,0:21:59.84:0,60,593	0/0:28,0:27:77.31:0,77,742	0/0:29,0:27:67:0,67,664	0/0:24,0:22:61.61:0,62,444	0/0:14,0:13:32.87:0,33,263	0/0:8,0:8:23.85:0,24,186	0/0:7,0:6:17.72:0,18,151	0/0:13,0:13:17.81:0,18,126	0/0:25,0:25:45.93:0,46,411	1/1:8,5:13:1.40:99,1,0	0/1:11,7:18:19.95:188,0,20	0/0:26,0:26:67.14:0,67,537	1/1:8,10:16:18.83:184,19,0
chr10	83830419	.	A	AAG	2839.48	PASS	AB=0.967;AC=18;AF=0.321;AN=56;BaseQRankSum=2.795;DP=552;FS=35.698;HRun=0;HaplotypeScore=80.1282;InbreedingCoeff=0.4380;MQ=57.11;MQ0=19;MQRankSum=5.113;QD=10.60;ReadPosRankSum=4.576;VQSLOD=1.6938;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:40:44.91:267,0,45	1/1:8,0:8:2.29:45,2,0	0/0:31,0:7:1.05:0,1,74	0/0:20,0:8:5.98:0,6,60	0/0:21,0:21:49.09:0,49,286	0/0:16,0:16:37.19:0,37,277	0/1:34,1:37:67.30:229,0,67	0/0:29,0:29:60.19:0,60,470	0/0:10,0:10:20.59:0,21,167	1/1:23,0:23:20.40:277,20,0	0/1:14,0:13:27.64:102,0,28	0/0:22,0:22:49.58:0,50,366	0/0:8,0:8:20.04:0,20,137	0/0:12,0:12:33.95:0,34,258	1/1:17,0:18:26.92:162,27,0	0/1:19,0:19:9.99:232,0,10	0/1:26,0:25:99:157,0,111	0/1:29,0:28:13.10:273,0,13	0/0:23,0:21:56.59:0,57,387	0/0:15,0:14:21.27:0,21,244	0/0:8,0:8:23.73:0,24,178	0/0:8,0:7:18.40:0,18,157	0/0:13,0:13:20.38:0,20,136	0/0:25,0:25:43.92:0,44,377	1/1:8,5:14:18.93:308,19,0	1/1:9,7:18:41.19:466,41,0	0/0:23,0:23:51.16:0,51,403	1/1:5,10:16:48.03:510,48,0
chr10	83831584	.	GA	G	1271.38	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.411;DP=661;FS=8.235;HRun=10;HaplotypeScore=64.2760;InbreedingCoeff=0.9804;MQ=60.94;MQ0=7;MQRankSum=1.410;QD=17.18;ReadPosRankSum=2.905;VQSLOD=4.0559;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,3:48:38.94:0,39,1077	0/0:7,0:7:21.05:0,21,225	0/0:14,0:10:24.05:0,24,257	0/0:12,0:7:21:0,21,210	0/0:39,0:40:99:0,102,1085	0/0:23,0:23:66.12:0,66,708	0/0:19,0:19:42.11:0,42,465	0/0:30,0:29:69.12:0,69,732	0/0:21,0:21:49.74:0,50,562	0/0:25,0:26:66:0,66,704	0/0:16,0:16:45.12:0,45,496	0/0:21,0:21:49.68:0,50,535	0/0:16,0:16:10.41:0,10,325	0/0:21,0:21:48.07:0,48,496	0/0:10,0:10:27.04:0,27,274	0/0:21,0:21:60.16:0,60,664	0/0:41,0:41:99:0,105,1162	0/0:30,0:29:37.47:0,37,769	0/0:22,0:20:48.12:0,48,522	0/0:27,0:27:62.95:0,63,653	0/0:24,0:24:66.18:0,66,730	0/0:22,0:22:57.13:0,57,609	0/0:23,0:23:51.14:0,51,564	0/0:30,0:30:69.19:0,69,763	1/1:3,17:21:46.93:386,47,0	1/1:2,32:34:31.75:715,32,0	0/0:21,0:21:57.13:0,57,618	1/1:3,16:18:35.99:313,36,0
chr10	83831705	.	TC	T	3165.26	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=6.517;DP=542;FS=3.383;HRun=9;HaplotypeScore=57.7834;InbreedingCoeff=0.8324;MQ=69.91;MQ0=1;MQRankSum=0.503;QD=17.98;ReadPosRankSum=4.162;VQSLOD=3.9044;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:34:78.04:714,78,0	1/1:2,6:8:18.01:164,18,0	0/0:10,0:8:3.26:0,3,123	0/1:21,0:19:21.82:22,0,130	0/0:19,0:19:57.05:0,57,627	0/0:19,0:19:51.15:0,51,584	0/0:25,0:25:66.20:0,66,762	0/0:27,0:27:57.17:0,57,652	0/0:25,0:24:60.18:0,60,692	1/1:3,19:22:54:488,54,0	1/1:1,15:16:36.01:329,36,0	0/0:27,0:27:78.17:0,78,866	0/0:14,0:14:33.10:0,33,378	0/0:16,0:16:27.08:0,27,311	1/1:3,17:20:42.02:384,42,0	1/1:2,21:23:63.03:577,63,0	1/1:5,27:32:75.03:684,75,0	0/0:19,0:19:51.14:0,51,577	0/0:22,0:22:54.15:0,54,614	0/0:12,0:12:30.08:0,30,337	0/0:27,0:27:61.73:0,62,696	0/0:19,0:19:45.09:0,45,506	0/0:8,0:8:18.05:0,18,207	0/0:24,0:24:66.20:0,66,761	0/0:3,0:18:31.40:0,31,170	0/0:5,0:14:4.02:0,4,118	0/0:18,0:18:45.13:0,45,519	0/0:3,0:3:4.22:0,4,23
chr10	83835992	.	CTCTTAT	C	1836.20	PASS	AB=0.955;AC=15;AF=0.300;AN=50;BaseQRankSum=7.278;DP=452;FS=0.691;HRun=0;HaplotypeScore=85.8224;InbreedingCoeff=0.8159;MQ=57.43;MQ0=1;MQRankSum=-5.212;QD=12.32;ReadPosRankSum=-0.388;VQSLOD=2.4183;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,19:35:11.96:199,12,0	1/1:2,3:5:8.92:137,9,0	./.	./.	0/0:16,0:16:27.09:0,27,749	0/0:15,0:15:24.07:0,24,699	0/0:21,0:21:39.10:0,39,1034	0/0:26,0:24:18.03:0,18,209	0/0:15,0:15:27.08:0,27,795	1/1:6,11:17:33.05:510,33,0	1/1:5,10:15:23.97:416,24,0	0/0:12,0:12:18.05:0,18,509	0/0:12,0:12:21.07:0,21,672	0/0:15,0:15:27.04:0,27,746	1/1:8,8:16:18.06:365,18,0	1/1:6,9:15:12.04:243,12,0	1/1:16,8:24:6.02:122,6,0	0/0:18,0:17:36.12:0,36,1109	0/0:14,0:21:29.99:0,30,579	0/0:5,0:15:14.98:0,15,293	0/0:9,0:11:3.01:0,3,76	./.	0/0:8,0:8:21.06:0,21,602	0/0:17,0:17:18.06:0,18,581	0/0:19,0:19:24.07:0,24,704	0/1:20,1:21:24.65:25,0,940	0/0:9,0:21:15.05:0,15,392	0/0:12,0:12:18.01:0,18,353
chr10	83837385	.	AT	A	1809.51	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.932;DP=419;FS=3.335;HRun=8;HaplotypeScore=39.1486;InbreedingCoeff=0.9564;MQ=65.87;MQ0=0;MQRankSum=-0.607;QD=23.20;ReadPosRankSum=0.707;VQSLOD=3.8798;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.23:0,96,1141	0/0:11,0:11:33.10:0,33,398	0/0:11,0:10:30.09:0,30,351	0/0:5,0:5:6.66:0,7,105	0/0:18,0:18:51.16:0,51,616	0/0:9,0:9:24.07:0,24,290	0/0:12,0:12:33.10:0,33,399	0/0:25,0:25:63.19:0,63,760	0/0:17,0:17:45.14:0,45,544	0/0:14,0:14:39.12:0,39,470	0/0:14,0:14:42.13:0,42,506	0/0:12,0:12:30.09:0,30,357	0/0:12,0:12:33.10:0,33,398	0/0:4,0:4:12.03:0,12,135	0/0:9,0:9:21.06:0,21,254	0/0:13,0:13:39.11:0,39,460	0/0:36,2:38:53.38:0,53,1200	1/1:1,17:18:45.07:435,45,0	0/0:11,0:11:32.87:0,33,363	0/0:15,0:15:30.09:0,30,362	0/0:6,0:6:18.06:0,18,217	0/0:12,0:12:30.08:0,30,352	0/0:9,0:9:21.06:0,21,254	0/0:6,0:6:15.05:0,15,180	1/1:1,13:14:36.06:348,36,0	1/1:3,17:20:51.08:492,51,0	0/0:23,0:23:60.18:0,60,722	1/1:2,24:26:72.11:695,72,0
chr10	83837844	.	G	GGTGTGT	1340.58	PASS	AB=0.910;AC=14;AF=0.292;AN=48;BaseQRankSum=6.255;DP=643;FS=20.022;HRun=0;HaplotypeScore=142.7388;InbreedingCoeff=0.4635;MQ=56.60;MQ0=24;MQRankSum=-6.034;QD=6.60;ReadPosRankSum=-4.783;VQSLOD=-0.4029;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:37:0.14:0,0,2	1/1:5,0:6:6:82,6,0	./.	./.	0/0:18,0:18:7.29:0,7,78	0/0:19,0:22:23.53:0,24,318	./.	0/1:33,0:30:8.90:21,0,9	0/0:16,0:16:17.87:0,18,333	1/1:28,0:31:32.12:554,32,0	0/1:5,3:10:0:0,0,0	0/0:15,0:14:21.04:0,21,357	0/0:14,0:14:17.40:0,17,287	0/0:10,0:13:16.30:0,16,285	./.	1/1:18,0:22:11.40:150,11,0	1/1:13,5:22:14.41:294,14,0	1/1:21,5:29:3.01:96,3,0	0/0:21,0:20:1.82:0,2,58	0/0:8,0:8:18:0,18,247	0/0:41,0:41:14.84:0,15,301	0/0:21,0:27:24.01:0,24,373	0/0:11,0:10:7.58:0,8,124	0/0:28,0:27:44.49:0,44,787	0/0:10,0:8:4.26:0,4,62	0/1:33,0:34:99:259,0,100	0/0:14,0:14:3:0,3,40	0/1:13,0:12:36.83:37,0,51
chr10	83837888	.	T	TGTGC	950.87	PASS	AB=0.920;AC=8;AF=0.148;AN=54;BaseQRankSum=2.780;DP=473;FS=2.024;HRun=0;HaplotypeScore=107.1762;InbreedingCoeff=0.0608;MQ=51.55;MQ0=13;MQRankSum=-6.314;QD=8.57;ReadPosRankSum=-1.312;VQSLOD=2.7911;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:30.30:0,30,232	0/1:7,0:6:35.77:59,0,36	0/0:2,0:1:2.94:0,3,18	./.	0/0:16,0:16:26.09:0,26,197	0/0:20,0:20:45:0,45,502	0/0:34,0:31:41.89:0,42,332	0/0:17,0:16:7.97:0,8,133	0/0:19,0:18:11.19:0,11,278	0/1:15,0:19:99:175,0,113	0/0:8,0:8:11.94:0,12,92	0/0:14,0:13:30:0,30,358	0/0:14,0:13:35.92:0,36,334	0/0:17,0:16:35.89:0,36,373	0/0:14,0:12:8.98:0,9,71	0/1:13,0:13:18.09:18,0,59	0/1:21,0:20:74.79:75,0,145	0/0:23,0:23:10.64:0,11,271	0/0:8,0:6:11.90:0,12,131	0/0:12,0:12:35.83:0,36,372	0/0:28,0:27:40.70:0,41,482	0/0:25,0:25:38.99:0,39,454	0/0:11,0:10:15.86:0,16,244	0/0:30,0:29:69.02:0,69,859	0/1:12,0:10:26.96:109,0,27	1/1:24,0:25:11.39:512,11,0	0/0:16,0:16:35.72:0,36,291	0/1:1,11:13:50.45:139,0,50
chr10	83839180	.	ATC	A	690.78	PASS	AB=1.000;AC=25;AF=0.481;AN=52;BaseQRankSum=-0.626;DP=535;FS=8.147;HRun=0;HaplotypeScore=90.4512;InbreedingCoeff=0.1332;MQ=66.79;MQ0=23;MQRankSum=4.077;QD=2.21;ReadPosRankSum=2.361;VQSLOD=1.0599;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:11.78:0,12,89	0/1:13,0:13:45.92:54,0,46	0/0:28,0:17:0.47:0,0,1	0/0:39,0:20:0:0,0,0	1/1:23,0:23:14.91:110,15,0	1/1:17,0:12:7.42:42,7,0	0/1:25,0:23:2.15:2,0,101	0/1:27,0:27:8.49:8,0,18	0/0:10,0:10:2.99:0,3,23	1/1:15,0:14:0.96:54,1,0	0/1:22,0:21:18.65:19,0,36	1/1:15,0:13:14.89:112,15,0	1/1:8,0:7:5.98:46,6,0	1/1:13,0:13:11.97:96,12,0	0/1:20,0:20:9.21:9,0,71	0/1:16,0:16:12.06:50,0,12	0/1:27,0:26:12.72:13,0,104	0/0:19,0:17:22.96:0,23,172	0/1:22,0:21:13.26:13,0,53	./.	0/0:17,0:16:2.98:0,3,22	1/1:14,0:14:11.96:93,12,0	0/0:5,6:10:0:0,0,0	1/1:18,0:18:11.95:93,12,0	./.	0/0:18,0:18:19.94:0,20,153	0/1:16,0:15:29.87:30,0,128	0/0:8,0:7:5.03:0,5,30
chr10	83839223	.	TCACACACACACACACA	T	1248.68	PASS	AB=0.837;AC=14;AF=0.292;AN=48;BaseQRankSum=3.045;DP=442;FS=9.790;HRun=0;HaplotypeScore=156.9878;InbreedingCoeff=0.4557;MQ=38.81;MQ0=39;MQRankSum=-3.630;QD=7.85;ReadPosRankSum=0.171;VQSLOD=1.9540;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,6:26:15.20:108,0,15	1/1:11,1:12:3.01:130,3,0	./.	./.	0/0:22,0:20:15.05:0,15,881	0/0:21,0:17:12.04:0,12,837	0/0:18,0:18:0:0,0,1	0/0:14,0:14:21.07:0,21,920	0/0:10,0:10:9.03:0,9,535	0/1:14,1:14:99:243,0,161	0/1:13,5:19:0:0,0,0	0/0:13,0:11:3.32:0,3,198	0/0:10,0:10:12.04:0,12,495	0/0:16,0:15:9.08:0,9,441	0/1:17,0:19:0:0,0,0	1/1:15,4:20:5.55:165,6,0	0/0:22,0:19:0.47:0,0,1	1/1:10,1:12:6.02:252,6,0	0/0:13,0:13:17.99:0,18,610	0/0:14,0:12:5.33:0,5,360	./.	0/0:21,0:21:9.50:0,10,485	0/0:15,0:14:0.47:0,0,1	0/0:29,0:27:18.04:0,18,1232	./.	1/1:14,2:14:9.02:237,9,0	0/0:10,0:9:6.02:0,6,393	1/1:7,1:6:6.02:248,6,0
chr10	83840367	.	T	TA	607.57	PASS	AB=0.958;AC=8;AF=0.143;AN=56;BaseQRankSum=-2.062;DP=485;FS=4.371;HRun=12;HaplotypeScore=57.6710;InbreedingCoeff=0.6318;MQ=60.18;MQ0=1;MQRankSum=0.185;QD=9.07;ReadPosRankSum=-2.360;VQSLOD=2.0901;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:41:78.45:0,78,558	0/0:7,0:7:17.71:0,18,122	0/0:13,0:8:5.16:0,5,81	0/0:10,0:5:2.97:0,3,21	0/0:24,1:25:21.25:0,21,317	0/0:22,0:22:47.68:0,48,350	0/0:17,1:18:12.59:0,13,255	0/0:32,2:33:1.25:0,1,333	0/0:15,0:15:35.76:0,36,262	0/0:27,0:28:55.65:0,56,397	0/1:8,0:8:4.65:5,0,66	0/0:11,0:12:22.89:0,23,158	0/0:21,0:21:47.69:0,48,350	0/0:6,0:8:16.91:0,17,112	0/0:19,0:19:50.68:0,51,370	0/1:10,1:11:2.35:2,0,146	0/0:11,0:12:22.69:0,23,159	0/0:15,1:16:9.57:0,10,230	0/0:18,0:21:47.82:0,48,321	0/0:23,0:23:45.16:0,45,327	0/0:8,0:9:19.89:0,20,134	0/0:8,0:9:19.93:0,20,137	0/0:11,0:11:14.82:0,15,107	0/0:20,0:24:46.89:0,47,308	1/1:0,9:9:21.03:204,21,0	1/1:10,13:22:14.12:290,14,0	0/0:19,0:19:40.71:0,41,286	1/1:3,12:16:26.88:248,27,0
chr10	83840558	.	C	CA	5597.34	PASS	AB=0.773;AC=26;AF=0.464;AN=56;BaseQRankSum=11.733;DP=463;FS=1.224;HRun=9;HaplotypeScore=72.5322;InbreedingCoeff=0.8204;MQ=74.25;MQ0=0;MQRankSum=-1.240;QD=23.92;ReadPosRankSum=1.804;VQSLOD=5.7254;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:32:86.53:971,87,0	0/1:1,5:6:8.01:148,0,8	0/1:14,0:13:15.21:15,0,17	0/0:7,0:7:0.50:0,1,22	0/0:20,0:20:56.97:0,57,491	0/0:18,0:18:47.97:0,48,413	1/1:1,12:13:30.08:332,30,0	0/0:34,0:34:76.40:0,76,675	0/0:12,0:12:35.99:0,36,312	1/1:6,12:18:42.10:451,42,0	1/1:1,13:14:33.09:362,33,0	0/0:8,0:8:21:0,21,182	0/0:11,0:11:30:0,30,261	0/0:11,0:11:26.98:0,27,234	1/1:4,16:20:42.11:465,42,0	1/1:1,10:11:33.07:350,33,0	1/1:4,15:19:45.11:488,45,0	1/1:8,14:22:48.57:513,49,0	0/0:17,0:17:41.96:0,42,359	0/0:29,0:29:71.97:0,72,625	0/0:11,0:11:26.98:0,27,234	0/0:12,0:12:26.99:0,27,234	0/0:15,0:15:38.99:0,39,339	1/1:7,0:7:5.91:37,6,0	1/1:2,13:15:36.10:398,36,0	1/1:3,21:23:60.11:641,60,0	0/0:24,0:24:58.22:0,58,493	1/1:5,14:17:39.10:426,39,0
chr10	83840598	.	TTGTGTGTG	T	1530.49	PASS	AB=0.920;AC=19;AF=0.500;AN=38;BaseQRankSum=2.872;DP=457;FS=0.000;HRun=0;HaplotypeScore=139.5914;InbreedingCoeff=0.5610;MQ=55.31;MQ0=16;MQRankSum=-5.153;QD=9.11;ReadPosRankSum=0.193;VQSLOD=2.2213;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:9,0:9:6.01:0,6,97	./.	./.	1/1:19,0:19:6.02:126,6,0	1/1:12,5:15:6.02:148,6,0	./.	0/0:24,0:23:0:0,0,0	1/1:13,2:15:9.03:222,9,0	0/0:18,0:18:18.90:0,19,310	0/0:15,0:16:2.41:0,2,393	1/1:10,4:14:6.02:148,6,0	1/1:7,0:7:3.01:56,3,0	1/1:16,2:17:9.03:222,9,0	0/0:12,0:12:9.03:0,9,173	0/0:12,0:12:9.03:0,9,257	0/0:14,0:17:8.11:0,8,357	0/0:22,0:25:23.27:0,23,1119	./.	1/1:20,0:21:3.01:56,3,0	./.	0/0:7,4:11:0:0,0,0	./.	./.	1/1:10,0:14:12.04:218,12,0	0/1:21,0:23:12.76:103,0,13	1/1:13,6:19:14.67:370,15,0	./.
chr10	83841604	.	TC	T	9621.68	PASS	AC=24;AF=0.444;AN=54;BaseQRankSum=9.187;DP=589;FS=9.979;HRun=3;HaplotypeScore=62.5575;InbreedingCoeff=0.9872;MQ=78.70;MQ0=1;MQRankSum=-3.312;QD=32.62;ReadPosRankSum=3.956;VQSLOD=4.7172;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,57:60:99:1822,147,0	1/1:1,6:7:15.05:186,15,0	0/0:19,0:19:51.08:0,51,682	0/0:17,0:17:47.82:0,48,626	0/0:14,0:14:30.07:0,30,390	0/0:28,0:28:78.24:0,78,1087	1/1:0,36:36:99:1227,99,0	0/0:15,0:15:36.12:0,36,518	0/0:23,0:23:69.22:0,69,977	1/1:0,18:18:42.11:505,42,0	1/1:0,3:3:9.03:112,9,0	0/0:35,0:35:99:0,102,1413	0/0:16,0:16:42.14:0,42,605	0/0:26,0:26:75.24:0,75,1062	1/1:0,23:23:60.19:744,60,0	1/1:0,9:9:18.06:223,18,0	1/1:1,41:42:99:1450,117,0	1/1:0,48:48:99:1695,138,0	0/0:13,0:13:36.11:0,36,500	0/0:10,0:10:27.08:0,27,371	0/0:38,0:37:99:0,108,1520	0/0:8,0:8:21.05:0,21,277	0/0:15,0:15:45.15:0,45,646	./.	1/1:0,17:17:42.13:521,42,0	1/1:0,23:23:66.19:803,66,0	0/0:17,0:17:48.15:0,48,672	1/1:0,9:9:27.08:335,27,0
chr10	83841858	.	C	CTGTGTG	2039.11	PASS	AB=0.860;AC=18;AF=0.346;AN=52;BaseQRankSum=0.551;DP=649;FS=0.683;HRun=0;HaplotypeScore=162.7756;InbreedingCoeff=0.5041;MQ=66.01;MQ0=7;MQRankSum=-6.866;QD=6.11;ReadPosRankSum=-2.364;VQSLOD=2.3924;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:38:32.41:32,0,34	1/1:3,0:6:3.01:78,3,0	./.	0/1:27,0:22:0:0,0,0	0/0:13,0:13:6.02:0,6,122	0/0:16,0:16:12.04:0,12,229	0/0:25,0:28:30.02:0,30,416	1/1:17,0:16:0.94:2,1,0	0/0:22,0:24:32.95:0,33,629	1/1:17,0:21:27.07:473,27,0	1/1:6,0:6:3.01:64,3,0	0/0:23,0:26:30.10:0,30,551	0/0:17,0:20:26.10:0,26,458	0/0:30,0:34:34.42:0,34,540	1/1:12,4:20:10.82:320,11,0	0/1:17,9:29:28.08:792,0,28	1/1:28,7:43:20.57:393,21,0	0/0:35,0:41:30.34:0,30,705	0/0:17,0:17:5.81:0,6,41	0/0:8,0:8:12.03:0,12,207	0/1:111,0:116:26.17:26,0,1056	0/0:7,0:7:9.03:0,9,171	0/0:8,0:8:6:0,6,86	./.	0/0:5,0:5:6.01:0,6,75	0/0:20,0:23:21.04:0,21,317	0/0:13,0:17:24.06:0,24,373	1/1:10,0:10:5.06:21,5,0
chr10	83842623	.	A	AC	1452.14	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=-6.915;DP=611;FS=6.580;HRun=7;HaplotypeScore=63.6157;InbreedingCoeff=0.9840;MQ=83.76;MQ0=0;MQRankSum=-2.429;QD=30.90;ReadPosRankSum=-1.489;VQSLOD=3.3115;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,955	0/0:4,0:4:12.02:0,12,116	0/0:33,0:33:39.91:0,40,618	0/0:24,0:24:36.02:0,36,446	0/0:21,0:21:48.08:0,48,463	0/0:19,0:19:57.08:0,57,545	0/0:30,0:30:78.12:0,78,753	0/0:26,0:26:60.08:0,60,579	0/0:23,0:23:63.10:0,63,608	0/0:27,0:27:72.09:0,72,688	0/0:13,0:13:39.06:0,39,375	0/0:21,0:21:57.08:0,57,550	0/0:16,0:16:45.07:0,45,434	0/0:24,0:24:66.09:0,66,631	0/0:20,0:20:54.09:0,54,522	0/0:20,0:20:54.07:0,54,516	0/0:28,0:28:75.11:0,75,724	0/0:24,0:24:66.10:0,66,637	0/0:25,0:25:59.09:0,59,546	0/0:17,0:17:48.07:0,48,460	0/0:42,0:42:99:0,111,1066	0/0:18,0:18:45.07:0,45,435	0/0:14,0:14:42.04:0,42,395	./.	0/0:17,0:17:36.05:0,36,348	1/1:2,31:34:96.11:1108,96,0	0/0:21,0:21:60.10:0,60,579	1/1:1,12:13:39.12:465,39,0
chr10	83846713	.	AAAAC	A	6623.29	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.825;DP=768;FS=1.176;HRun=0;HaplotypeScore=127.9900;InbreedingCoeff=0.9880;MQ=63.94;MQ0=5;MQRankSum=-1.131;QD=27.14;ReadPosRankSum=1.660;VQSLOD=4.9898;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,30:39:78.27:1261,78,0	1/1:4,9:13:21.03:311,21,0	0/0:14,0:8:9:0,9,165	0/0:34,0:27:24.16:0,24,960	0/0:23,0:23:27.09:0,27,651	0/0:24,0:24:51.18:0,51,1220	1/1:4,11:15:27.09:436,27,0	0/0:34,0:34:60.17:0,60,1268	0/0:33,0:33:63.22:0,63,1501	1/1:14,20:35:66.15:949,66,0	1/1:5,15:20:42.10:650,42,0	0/0:30,0:30:69.24:0,69,1647	0/0:22,0:22:51.16:0,51,1184	0/0:21,0:21:45.15:0,45,1065	1/1:4,21:25:45.15:728,45,0	1/1:13,19:31:36.12:582,36,0	1/1:9,25:34:47.66:775,48,0	1/1:8,23:31:59.69:931,60,0	0/0:31,0:30:50.54:0,51,1107	0/0:37,0:37:72.25:0,72,1706	0/0:36,0:36:78.22:0,78,1709	0/0:22,0:22:42.13:0,42,946	0/0:32,0:32:57.20:0,57,1373	0/0:35,0:35:93.25:0,93,2093	0/0:3,0:18:24.08:0,24,418	0/0:22,0:35:66.18:0,66,927	0/0:35,0:35:75.26:0,75,1784	0/0:3,0:8:18.06:0,18,298
chr10	83847358	.	CCCCGAGCTTGTT	C	442.43	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.370;DP=635;FS=6.480;HRun=0;HaplotypeScore=211.9950;InbreedingCoeff=0.9801;MQ=87.38;MQ0=1;MQRankSum=-3.192;QD=27.65;ReadPosRankSum=-0.721;VQSLOD=2.3880;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,166,9785	0/0:7,0:7:21.07:0,21,1094	0/0:33,0:32:78.88:0,79,3905	0/0:20,0:20:57.14:0,57,2027	0/0:17,0:17:48.16:0,48,2889	0/0:14,0:14:42.14:0,42,2458	0/0:25,0:25:75.25:0,75,4255	0/0:15,0:15:39.11:0,39,1881	0/0:21,0:21:63.22:0,63,3733	0/0:18,0:18:51.17:0,51,2864	0/0:10,0:10:27.09:0,27,1477	0/0:21,0:21:63.19:0,63,3621	0/0:23,0:23:66.22:0,66,3777	0/0:27,0:27:81.28:0,81,4655	0/0:19,0:19:57.20:0,57,3328	0/0:12,0:12:36.12:0,36,2253	0/0:38,0:38:99:0,108,6556	0/0:25,0:25:72.23:0,72,4176	0/0:18,0:18:54.18:0,54,2829	0/0:14,0:14:42.12:0,42,1950	0/0:63,0:63:99:0,187,10485	0/0:21,0:21:63.22:0,63,3582	0/0:15,0:15:45.15:0,45,2624	1/1:4,12:16:15.50:531,16,0	0/0:17,0:17:51.18:0,51,3174	0/0:29,0:29:87.29:0,87,4914	0/0:28,0:28:84.28:0,84,5094	0/0:14,0:14:33.11:0,33,1998
chr10	83847649	.	A	AGTGTGT	1728.45	PASS	AB=1.000;AC=25;AF=0.481;AN=52;BaseQRankSum=-1.834;DP=725;FS=0.000;HRun=0;HaplotypeScore=152.9819;InbreedingCoeff=0.5079;MQ=54.10;MQ0=12;MQRankSum=-0.881;QD=4.65;ReadPosRankSum=-1.612;VQSLOD=2.4289;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:34:17.54:202,18,0	1/1:14,1:15:8.94:217,9,0	./.	./.	0/0:12,0:12:3.01:0,3,51	0/0:18,0:19:3:0,3,219	1/1:37,0:39:21.16:222,21,0	1/1:29,0:32:6.37:62,6,0	0/0:27,0:26:34.80:0,35,508	1/1:24,0:32:13.36:287,13,0	1/1:19,0:19:9:98,9,0	0/0:24,0:26:27.88:0,28,395	0/1:19,0:23:7.65:8,0,206	0/0:26,0:27:29.29:0,29,444	1/1:16,11:27:2.98:96,3,0	1/1:16,11:29:9.92:230,10,0	1/1:9,11:22:0.47:1,0,0	1/1:30,0:34:28.28:422,28,0	0/0:20,0:21:15.15:0,15,114	0/1:14,0:14:1.21:33,0,1	0/0:59,0:76:17.81:0,18,201	0/0:19,0:19:12.02:0,12,198	0/1:14,0:13:12.82:13,0,134	0/0:40,0:41:50.89:0,51,988	0/1:17,0:18:5.93:6,0,185	0/0:8,0:15:14.83:0,15,160	0/1:11,0:12:12:12,0,50	0/0:7,0:9:6.02:0,6,84
chr10	83848072	.	CGAGAGCGAGAGCGAGA	C	1577.29	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=2.950;DP=634;FS=1.381;HRun=0;HaplotypeScore=282.2348;InbreedingCoeff=0.7811;MQ=72.20;MQ0=21;MQRankSum=-2.814;QD=17.33;ReadPosRankSum=-1.400;VQSLOD=2.1407;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:44.02:0,44,1340	0/0:3,0:3:6.01:0,6,78	0/0:25,0:15:13:0,13,134	0/1:50,0:28:5.64:6,0,140	0/0:15,0:15:42.14:0,42,1581	0/0:20,0:20:54.18:0,54,2018	0/0:33,0:33:38.63:0,39,629	0/0:22,0:20:33.37:0,33,511	0/0:18,0:17:48.11:0,48,2000	0/0:19,0:18:47.56:0,48,799	0/0:15,0:15:25.27:0,25,490	0/0:25,0:24:59.82:0,60,2182	0/0:16,0:16:42.09:0,42,1568	0/0:27,0:27:78.04:0,78,2931	0/0:25,0:25:26.37:0,26,797	0/0:28,0:28:72.08:0,72,1410	0/0:32,0:31:37.61:0,38,1373	0/0:17,0:17:49.75:0,50,820	0/0:23,0:18:47.81:0,48,1189	0/0:9,0:9:21.05:0,21,459	0/0:40,0:39:47.64:0,48,792	0/0:16,0:16:38.82:0,39,1053	0/0:18,0:18:3.21:0,3,1599	0/0:33,0:33:87.21:0,87,3672	1/1:12,1:12:18.04:244,18,0	1/1:10,3:13:39.13:1065,39,0	0/0:20,0:20:25.37:0,25,1008	1/1:10,1:11:20.90:406,21,0
chr10	83848084	.	CGAGAGA	C	3516.10	PASS	AB=0.858;AC=29;AF=0.518;AN=56;BaseQRankSum=7.934;DP=605;FS=22.232;HRun=0;HaplotypeScore=166.6508;InbreedingCoeff=0.4519;MQ=55.72;MQ0=28;MQRankSum=-5.539;QD=9.02;ReadPosRankSum=-0.910;VQSLOD=0.6455;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:42,2:46:19.42:308,19,0	1/1:4,0:5:5.96:45,6,0	0/0:13,0:5:0:0,0,0	0/0:39,0:12:5.26:0,5,61	0/0:21,0:23:53.19:0,53,785	0/0:21,0:23:20.88:0,21,699	0/1:25,0:26:2.04:30,0,2	0/1:18,0:19:5.86:133,0,6	0/0:15,0:14:34.40:0,34,703	1/1:18,1:18:6.12:270,6,0	1/1:11,2:14:5.65:39,6,0	0/1:19,0:21:9.01:9,0,675	0/0:13,0:14:23.81:0,24,475	0/0:27,0:27:57.11:0,57,1188	1/1:14,3:20:9.01:107,9,0	1/1:22,7:29:41.72:435,42,0	1/1:29,5:32:50.72:599,51,0	1/1:11,3:14:6.76:259,7,0	0/1:18,9:21:8.20:255,0,8	1/1:3,3:6:8.82:100,9,0	0/1:16,23:38:8.12:18,0,8	0/0:14,0:14:23.76:0,24,382	0/0:14,0:14:23.78:0,24,591	0/0:31,0:32:72.08:0,72,1493	1/1:12,0:12:11.72:74,12,0	0/1:18,0:15:11.94:238,0,12	1/1:8,7:20:38.81:547,39,0	0/1:11,0:12:51.09:51,0,154
chr10	83848108	.	AGAGAGAGC	A	5001.97	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=9.629;DP=663;FS=49.816;HRun=0;HaplotypeScore=183.0531;InbreedingCoeff=0.4042;MQ=65.40;MQ0=21;MQRankSum=-4.690;QD=13.09;ReadPosRankSum=3.109;VQSLOD=2.4471;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:48,0:48:41.18:616,41,0	1/1:6,0:6:9.03:124,9,0	0/0:47,0:23:26.82:0,27,336	0/0:53,0:22:50.52:0,51,523	0/0:26,0:26:77.55:0,78,1658	0/0:22,0:22:24.96:0,25,1354	1/1:8,21:29:4.88:98,5,0	0/1:24,0:22:7.05:7,0,476	0/0:16,0:15:45.14:0,45,1232	1/1:19,0:19:51:699,51,0	1/1:11,0:10:5.89:88,6,0	0/0:25,0:24:41.86:0,42,1229	0/0:13,0:13:38.83:0,39,843	0/0:22,0:22:66.19:0,66,2040	1/1:22,0:21:9.01:152,9,0	1/1:28,0:28:42.03:718,42,0	1/1:37,0:35:60.03:1111,60,0	0/1:20,0:19:17.59:494,0,18	0/1:16,0:14:79.95:80,0,173	0/1:11,0:10:11.66:12,0,71	0/1:39,0:38:2.91:3,0,238	0/0:14,0:14:38.74:0,39,804	0/0:14,0:14:41.93:0,42,1126	0/0:29,0:29:78.22:0,78,2498	1/1:15,0:14:5.92:103,6,0	0/1:21,0:19:10.84:480,0,11	0/1:24,0:24:76.83:77,0,230	0/1:12,0:12:55.63:141,0,56
chr10	83848118	.	CGT	C	4789.54	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=8.471;DP=646;FS=20.689;HRun=0;HaplotypeScore=118.2542;InbreedingCoeff=0.9435;MQ=74.03;MQ0=12;MQRankSum=-3.344;QD=20.04;ReadPosRankSum=4.292;VQSLOD=3.3521;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:40:35.77:549,36,0	1/1:0,6:6:9.03:132,9,0	0/0:51,0:27:38.70:0,39,731	0/0:56,1:28:60.92:0,61,829	0/0:25,0:25:74.76:0,75,1195	0/0:23,0:23:59.19:0,59,911	1/1:21,1:22:3.01:37,3,0	0/0:27,0:27:77.91:0,78,1251	0/0:15,0:15:45.11:0,45,737	1/1:1,21:22:65.19:918,65,0	1/1:1,8:9:6.02:98,6,0	0/0:24,0:24:65.21:0,65,1071	0/0:15,0:15:44.44:0,44,600	0/0:21,0:21:63.09:0,63,1128	1/1:2,20:21:8.96:105,9,0	1/1:0,23:23:33.17:489,33,0	1/1:1,33:34:48.14:737,48,0	1/1:3,17:19:30.56:460,31,0	0/0:15,0:14:28.97:0,29,394	0/0:13,0:13:27.07:0,27,357	0/0:37,0:36:38.86:0,39,530	0/0:13,0:13:38.95:0,39,631	0/0:15,0:15:45.15:0,45,777	0/0:27,0:27:74.98:0,75,1389	1/1:11,2:13:29.80:356,30,0	1/1:12,7:19:30.41:640,30,0	0/0:28,0:28:63.49:0,63,848	1/1:6,3:9:23.94:268,24,0
chr10	83848384	.	TTAAA	T	6583.01	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=12.624;DP=425;FS=0.000;HRun=0;HaplotypeScore=65.8966;InbreedingCoeff=0.8605;MQ=56.12;MQ0=4;MQRankSum=-0.620;QD=27.78;ReadPosRankSum=5.623;VQSLOD=4.1314;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:29:63.22:1044,63,0	1/1:2,6:8:5.31:98,5,0	0/0:3,0:1:3.01:0,3,63	0/0:2,0:1:0:0,0,0	0/0:15,0:15:33.10:0,33,737	0/0:17,0:17:51.16:0,51,1153	1/1:5,7:12:12.04:183,12,0	0/0:17,0:17:36.12:0,36,823	0/0:9,0:9:24.08:0,24,545	1/1:7,13:19:39.12:622,39,0	1/1:3,18:21:45.09:714,45,0	0/0:10,0:10:18.06:0,18,441	0/0:6,0:6:18.06:0,18,418	0/0:12,0:12:18.06:0,18,442	1/1:6,3:9:9.03:149,9,0	1/1:2,6:8:6.02:99,6,0	1/1:8,36:44:72.21:1165,72,0	1/1:8,13:21:33.11:547,33,0	0/0:28,0:25:54.12:0,54,1178	0/0:7,0:7:9.02:0,9,173	0/0:18,0:18:36.12:0,36,841	0/0:6,0:6:12.04:0,12,266	0/0:7,0:7:3.01:0,3,43	0/0:5,0:5:9.03:0,9,221	1/1:9,16:25:27.09:448,27,0	1/1:2,19:21:57.17:917,57,0	0/0:26,0:25:45.13:0,45,1029	1/1:5,14:19:36.12:597,36,0
chr10	83848891	.	GT	G	868.95	PASS	AB=0.944;AC=16;AF=0.286;AN=56;BaseQRankSum=3.159;DP=495;FS=10.403;HRun=1;HaplotypeScore=63.2416;InbreedingCoeff=0.6147;MQ=55.93;MQ0=45;MQRankSum=-0.548;QD=6.74;ReadPosRankSum=0.218;VQSLOD=-0.4665;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:23:3.85:0,4,22	1/1:4,0:2:0.89:2,1,0	0/0:24,0:17:48.15:0,48,593	0/0:23,0:17:48.11:0,48,584	0/0:12,0:11:24.08:0,24,322	0/0:20,0:20:45.09:0,45,550	0/0:31,0:27:3.88:0,4,124	0/0:15,0:15:43.86:0,44,485	0/0:19,0:19:33.11:0,33,447	0/1:14,2:10:57.13:194,0,57	0/1:10,0:7:34.19:34,0,36	0/0:18,0:17:31.80:0,32,368	0/0:12,0:12:24.92:0,25,298	0/0:19,0:18:34.62:0,35,412	1/1:14,0:12:6.11:81,6,0	1/1:15,0:13:4.93:31,5,0	1/1:33,3:31:2.04:171,2,0	0/0:19,1:16:12.44:0,12,127	0/0:12,0:12:32.99:0,33,374	0/0:6,0:6:18.06:0,18,225	0/0:37,0:38:69.28:0,69,1013	0/0:16,0:14:36.11:0,36,461	0/0:14,0:14:30.10:0,30,403	0/0:26,0:25:36.02:0,36,452	1/1:3,5:3:3.01:40,3,0	1/1:2,12:10:21.03:262,21,0	0/0:14,0:13:35.67:0,36,479	1/1:5,7:7:20.40:219,20,0
chr10	83848892	.	T	TGTG	1854.65	PASS	AB=0.681;AC=21;AF=0.375;AN=56;BaseQRankSum=-0.532;DP=490;FS=16.457;HRun=0;HaplotypeScore=77.8296;InbreedingCoeff=0.7283;MQ=56.46;MQ0=43;MQRankSum=-1.906;QD=9.00;ReadPosRankSum=-0.908;VQSLOD=1.0953;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:23:6.01:93,6,0	1/1:1,0:2:3.01:48,3,0	0/0:24,0:17:48.15:0,48,600	0/0:23,0:17:44.82:0,45,585	0/0:11,0:10:24.08:0,24,317	0/0:20,0:20:39.26:0,39,528	0/1:11,15:27:2.10:54,0,2	0/0:16,0:16:39.03:0,39,449	0/0:19,0:19:36.11:0,36,471	1/1:6,0:10:14.62:239,15,0	1/1:3,0:7:6.01:66,6,0	0/0:17,0:16:26.77:0,27,343	0/0:10,0:10:24.51:0,25,287	0/0:18,0:18:30.57:0,31,394	1/1:4,0:13:11.83:162,12,0	1/1:1,1:12:13.87:177,14,0	1/1:6,3:29:45.45:776,45,0	0/1:6,11:18:14.15:110,0,14	0/0:11,0:11:32.93:0,33,381	0/0:6,0:6:15.05:0,15,190	0/0:36,0:36:68.86:0,69,838	0/0:18,0:16:33:0,33,405	0/0:14,0:14:30.10:0,30,389	0/0:27,0:26:35.86:0,36,457	1/1:5,0:3:3.01:40,3,0	1/1:13,0:10:15.50:216,15,0	0/0:14,0:13:33.11:0,33,417	0/1:10,0:7:3.28:68,0,3
chr10	83849980	.	T	TAAAACAAAAC	12613.27	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-0.629;DP=685;FS=0.000;HRun=0;HaplotypeScore=178.7106;InbreedingCoeff=0.9863;MQ=71.90;MQ0=5;MQRankSum=-12.274;QD=45.54;ReadPosRankSum=-3.054;VQSLOD=4.0198;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,28:56:56:2081,56,0	1/1:6,8:14:24.55:956,25,0	0/0:30,0:21:21.06:0,21,398	0/0:43,0:30:28.03:0,28,563	0/0:28,0:28:60.14:0,60,1491	0/0:20,0:20:39.10:0,39,1057	1/1:13,19:32:27.09:1284,27,0	0/0:32,0:32:51.14:0,51,1205	0/0:22,0:22:42.13:0,42,1101	1/1:11,17:30:60.20:2272,60,0	1/1:10,13:25:30.03:1163,30,0	0/0:30,0:30:69.19:0,69,1785	0/0:23,0:23:42.13:0,42,1160	0/0:26,0:26:60.20:0,60,1689	1/1:7,11:18:21.07:909,21,0	1/1:10,11:21:21.07:1049,21,0	1/1:10,8:17:24.07:1149,24,0	1/1:9,11:20:15.05:718,15,0	0/0:19,0:18:39.11:0,39,882	0/0:21,0:21:42.09:0,42,1024	0/0:22,0:22:42.13:0,42,1135	0/0:25,0:25:45.15:0,45,1222	0/0:12,0:12:24.08:0,24,681	0/0:31,0:31:72.24:0,72,1955	1/1:3,0:15:21.52:257,22,0	1/1:8,0:23:51.08:639,51,0	0/0:24,0:24:54.14:0,54,1528	1/1:1,0:3:9.02:138,9,0
chr10	83852163	.	GA	G	5525.01	PASS	AB=0.858;AC=26;AF=0.464;AN=56;BaseQRankSum=11.257;DP=548;FS=4.581;HRun=10;HaplotypeScore=56.1262;InbreedingCoeff=0.8591;MQ=71.44;MQ0=0;MQRankSum=-1.396;QD=19.05;ReadPosRankSum=1.846;VQSLOD=5.8135;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:77.98:677,78,0	1/1:0,14:14:38.99:338,39,0	0/0:11,0:11:16.06:0,16,255	0/0:8,0:8:14.80:0,15,128	0/0:19,0:19:45.10:0,45,482	0/0:30,0:30:84.15:0,84,903	1/1:4,17:21:50.99:442,51,0	0/0:16,0:16:39.06:0,39,410	0/0:18,0:17:39.10:0,39,424	1/1:10,24:34:71.97:625,72,0	1/1:0,18:18:47.98:417,48,0	0/0:24,1:25:34.08:0,34,588	0/0:19,0:19:57.13:0,57,614	0/1:12,3:15:13.02:13,0,317	1/1:2,14:16:32.99:287,33,0	1/1:2,16:18:38.99:339,39,0	1/1:1,20:22:59.02:501,59,0	1/1:2,12:14:32.99:286,33,0	0/0:23,1:24:34.05:0,34,586	0/0:9,0:9:21.22:0,21,254	0/0:26,0:27:46.56:0,47,671	0/0:11,0:12:29.91:0,30,313	0/0:19,0:19:51.13:0,51,557	0/0:21,0:21:51.14:0,51,564	1/1:2,24:26:68.97:599,69,0	1/1:2,24:26:71.98:625,72,0	0/1:13,2:15:12.16:12,0,313	1/1:1,17:18:41.98:365,42,0
chr10	83854106	.	GCC	G	621.15	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.023;DP=287;FS=2.622;HRun=11;HaplotypeScore=42.2413;InbreedingCoeff=0.6726;MQ=65.88;MQ0=2;MQRankSum=1.370;QD=13.22;ReadPosRankSum=1.821;VQSLOD=1.0867;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:16:23.55:0,24,302	0/0:3,0:3:6.02:0,6,81	0/0:11,1:12:8.38:0,8,72	0/0:17,0:13:0.66:0,1,193	0/0:12,0:11:30.06:0,30,395	0/0:9,0:9:21.06:0,21,297	0/0:12,1:14:33.95:0,34,430	0/0:11,0:11:12.01:0,12,121	0/0:14,0:16:41.04:0,41,484	0/0:7,0:7:7.99:0,8,97	0/0:1,0:3:3:0,3,29	0/0:5,0:6:15.78:0,16,184	0/0:8,0:8:18.04:0,18,249	0/0:8,0:9:20.80:0,21,272	0/0:1,0:2:3:0,3,29	0/0:2,0:5:9.02:0,9,104	0/0:9,0:12:29.56:0,30,340	0/0:14,0:15:35.61:0,36,507	0/0:6,0:6:9.02:0,9,117	0/0:3,0:3:6.01:0,6,66	0/0:16,0:16:18.03:0,18,232	0/0:3,0:5:10.98:0,11,68	0/0:5,0:5:12.03:0,12,150	0/0:17,0:17:41.81:0,42,609	1/1:2,0:17:28.99:124,29,0	1/1:2,15:17:42.05:446,42,0	0/0:9,0:10:23.02:0,23,257	1/1:5,8:13:17.99:190,18,0
chr10	83854405	.	C	CT	3106.95	PASS	AB=0.857;AC=20;AF=0.357;AN=56;BaseQRankSum=-7.638;DP=404;FS=0.445;HRun=9;HaplotypeScore=39.8579;InbreedingCoeff=0.7479;MQ=64.50;MQ0=4;MQRankSum=1.041;QD=19.54;ReadPosRankSum=2.328;VQSLOD=3.4515;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:27:63.17:697,63,0	1/1:1,3:4:9.02:100,9,0	0/0:16,0:12:16.78:0,17,130	0/0:7,0:5:5.99:0,6,52	0/0:16,0:16:38.98:0,39,338	0/0:20,0:20:53.98:0,54,468	1/1:3,10:13:18.05:199,18,0	0/0:36,0:34:92.94:0,93,803	0/0:14,0:15:26.02:0,26,214	1/1:3,10:12:4.02:273,4,0	1/1:1,5:7:18.01:186,18,0	0/0:10,0:10:23.98:0,24,208	0/0:2,0:2:6:0,6,52	0/0:13,0:13:23.98:0,24,208	1/1:3,11:14:30.08:330,30,0	1/1:3,11:14:30.08:332,30,0	1/1:4,28:31:78.21:863,78,0	1/1:1,9:10:27.07:299,27,0	0/0:24,0:23:53.98:0,54,466	0/0:11,1:12:0.29:0,0,136	0/0:13,0:13:29.97:0,30,260	0/1:3,1:4:24.19:24,0,43	0/0:8,0:9:17.02:0,17,136	0/0:8,0:8:20.97:0,21,177	0/0:13,0:13:32.98:0,33,286	0/1:19,2:21:9.38:9,0,386	0/0:14,0:14:26.99:0,27,234	0/0:17,0:17:41.96:0,42,365
chr10	83857337	.	GAT	G	1716.17	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.418;DP=702;FS=2.645;HRun=0;HaplotypeScore=127.3064;InbreedingCoeff=0.9930;MQ=85.31;MQ0=0;MQRankSum=-1.127;QD=35.75;ReadPosRankSum=-1.980;VQSLOD=5.0108;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,2661	0/0:10,0:10:30.01:0,30,527	0/0:23,0:23:32.52:0,33,1137	0/0:23,0:23:37.20:0,37,1158	0/0:19,0:19:57.15:0,57,1117	0/0:16,0:16:48.16:0,48,975	0/0:36,0:36:99:0,108,2076	0/0:26,0:26:78.26:0,78,1531	0/0:37,0:37:99:0,108,2179	0/0:31,0:31:90.31:0,90,1829	0/0:11,0:11:29.97:0,30,600	0/0:22,0:22:66.21:0,66,1282	0/0:19,0:19:54.19:0,54,1097	0/0:34,0:34:99:0,102,2024	0/0:28,0:28:84.28:0,84,1673	0/0:31,0:31:93.32:0,93,1890	0/0:37,0:37:99:0,108,2166	0/0:30,0:30:87.30:0,87,1730	0/0:22,0:22:66.23:0,66,1340	0/0:15,0:15:45.11:0,45,852	0/0:52,0:52:99:0,153,3049	0/0:24,0:24:66.70:0,67,1342	0/0:13,0:13:39.12:0,39,756	0/0:24,0:24:72.25:0,72,1450	1/1:0,13:13:24.08:363,24,0	1/1:0,30:30:87.16:1249,87,0	0/0:27,0:27:81.26:0,81,1597	1/1:0,5:5:15.05:245,15,0
chr10	83858042	.	T	TA	4824.32	PASS	AB=0.594;AC=17;AF=0.304;AN=56;BaseQRankSum=-13.910;DP=587;FS=1.250;HRun=8;HaplotypeScore=65.1950;InbreedingCoeff=0.9253;MQ=74.79;MQ0=1;MQRankSum=-0.957;QD=23.65;ReadPosRankSum=2.224;VQSLOD=5.6565;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:34:69.21:796,69,0	1/1:6,6:12:18.05:208,18,0	0/0:42,1:30:6.18:0,6,338	0/0:27,0:17:16.86:0,17,156	0/0:32,0:32:75.03:0,75,685	0/0:12,0:12:33.02:0,33,302	1/1:0,10:10:21.06:242,21,0	0/0:17,1:17:10.38:0,10,340	0/0:26,0:26:56.99:0,57,512	1/1:6,23:29:69.17:774,69,0	1/1:2,16:18:48.14:551,48,0	0/0:26,0:26:51:0,51,465	0/0:18,0:18:45.02:0,45,412	0/0:14,0:14:36.02:0,36,329	1/1:3,12:15:33.10:381,33,0	1/1:2,22:24:54.16:623,54,0	1/1:9,34:43:84.25:970,84,0	0/1:5,13:18:1.10:279,0,1	0/0:17,0:17:38.92:0,39,339	0/0:21,0:21:54.01:0,54,490	0/0:11,0:11:27.01:0,27,247	0/0:10,0:10:18:0,18,165	0/0:13,0:13:36.01:0,36,325	0/0:12,0:12:33:0,33,298	0/0:26,0:26:69.03:0,69,631	0/0:25,0:25:63.02:0,63,573	0/0:20,0:20:47.96:0,48,426	0/0:10,0:10:30.02:0,30,274
chr10	83858451	.	AAG	A	2199.88	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.864;DP=645;FS=4.600;HRun=0;HaplotypeScore=76.1223;InbreedingCoeff=0.9994;MQ=74.20;MQ0=1;MQRankSum=-0.444;QD=29.33;ReadPosRankSum=0.183;VQSLOD=4.7259;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.29:0,84,1442	0/0:11,0:11:30.10:0,30,519	0/0:18,0:18:36.42:0,36,750	0/0:19,0:19:44.29:0,44,726	0/0:22,0:22:60.21:0,60,1039	0/0:24,0:24:72.23:0,72,1205	0/0:21,0:21:57.20:0,57,987	0/0:24,0:24:72.23:0,72,1191	0/0:30,0:30:87.27:0,87,1453	0/0:31,0:31:78.27:0,78,1345	0/0:22,0:22:54.18:0,54,915	0/0:17,0:17:48.14:0,48,771	0/0:17,0:17:51.17:0,51,865	0/0:33,0:33:81.28:0,81,1396	0/0:23,0:23:63.22:0,63,1078	0/0:26,0:26:75.23:0,75,1245	0/0:27,0:27:63.22:0,63,1091	0/0:16,0:16:42.14:0,42,722	0/0:27,0:27:69.23:0,69,1163	0/0:27,0:27:75.26:0,75,1288	0/0:15,0:15:36.11:0,36,584	0/0:26,0:26:72.24:0,72,1206	0/0:20,0:20:48.15:0,48,786	0/0:12,0:12:36.12:0,36,623	1/1:4,14:16:30.10:399,30,0	1/1:8,23:32:35.30:1066,35,0	0/0:33,0:33:93.30:0,93,1582	1/1:6,19:25:66.22:878,66,0
chr10	83858546	.	GT	G	1391.78	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.724;DP=653;FS=4.660;HRun=4;HaplotypeScore=79.5855;InbreedingCoeff=0.9993;MQ=77.14;MQ0=0;MQRankSum=-0.137;QD=26.26;ReadPosRankSum=1.308;VQSLOD=2.6413;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.19:0,63,862	0/0:13,0:13:30.10:0,30,420	0/0:14,0:15:38.90:0,39,485	0/0:15,0:15:33.07:0,33,434	0/0:31,0:31:63.21:0,63,871	0/0:23,0:23:69.20:0,69,926	0/0:27,0:27:78.25:0,78,1076	0/0:31,0:31:87.28:0,87,1189	0/0:22,0:22:63.20:0,63,866	0/0:25,0:25:72.24:0,72,1008	0/0:29,0:29:63.21:0,63,882	0/0:20,0:20:60.19:0,60,822	0/0:23,0:23:69.23:0,69,966	0/0:27,0:27:81.27:0,81,1133	0/0:29,0:29:81.26:0,81,1114	0/0:24,0:24:63.21:0,63,881	0/0:32,0:32:96.32:0,96,1344	0/0:19,0:19:57.18:0,57,781	0/0:29,0:29:81.23:0,81,1080	0/0:29,0:29:87.28:0,87,1198	0/0:20,0:20:57.18:0,57,780	0/0:27,0:27:72.24:0,72,1007	0/0:22,0:22:57.15:0,57,775	0/0:22,0:22:66.22:0,66,910	1/1:5,7:12:27.07:311,27,0	1/1:3,21:24:63.19:756,63,0	0/0:23,0:23:69.23:0,69,966	1/1:2,15:17:39.12:468,39,0
chr10	83859220	.	GT	G	846.67	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.546;DP=355;FS=0.968;HRun=5;HaplotypeScore=41.2542;InbreedingCoeff=0.9350;MQ=79.45;MQ0=0;MQRankSum=-0.264;QD=26.46;ReadPosRankSum=0.187;VQSLOD=2.6198;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:81.27:0,81,1103	0/0:6,0:6:15.05:0,15,205	0/0:12,0:12:21.05:0,21,254	0/0:7,0:7:21.07:0,21,283	0/0:16,0:15:36.12:0,36,492	0/0:11,0:11:30.10:0,30,409	0/0:9,0:9:27.08:0,27,353	0/0:22,0:22:66.21:0,66,885	0/0:11,0:11:30.10:0,30,410	0/0:14,0:14:42.14:0,42,574	0/0:11,0:11:30.09:0,30,396	0/0:8,0:8:21.07:0,21,287	0/0:12,0:12:36.11:0,36,475	0/0:14,0:14:39.13:0,39,532	0/0:16,0:16:48.16:0,48,656	0/0:8,0:8:24.08:0,24,328	0/0:23,0:23:69.23:0,69,941	0/0:19,0:19:57.19:0,57,780	0/0:14,0:14:36.12:0,36,492	0/0:7,0:7:21.07:0,21,287	0/0:13,0:13:39.12:0,39,517	0/0:2,0:2:6.02:0,6,82	0/0:4,0:4:12.04:0,12,164	0/0:11,0:11:30.10:0,30,410	1/1:0,10:10:27.08:306,27,0	1/1:0,16:16:45.13:510,45,0	0/0:20,0:20:51.15:0,51,675	1/1:0,6:6:15.04:170,15,0
chr10	83859589	.	CACA	C	616.86	PASS	AB=0.538;AC=5;AF=0.089;AN=56;BaseQRankSum=3.523;DP=581;FS=0.960;HRun=0;HaplotypeScore=96.4035;InbreedingCoeff=0.5643;MQ=80.94;MQ0=0;MQRankSum=-2.084;QD=34.27;ReadPosRankSum=1.216;VQSLOD=3.8745;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,1737	0/0:4,0:4:9.03:0,9,157	0/0:25,0:25:72.23:0,72,1595	0/0:22,1:23:20.25:0,20,1336	0/0:8,0:8:18.06:0,18,334	0/0:22,0:22:63.22:0,63,1395	0/0:33,0:33:96.05:0,96,1421	0/0:26,0:26:75.26:0,75,1686	0/0:25,0:25:72.25:0,72,1658	0/0:15,0:14:39.07:0,39,658	0/0:1,0:1:3.01:0,3,60	0/0:23,0:23:66.23:0,66,1484	0/0:24,0:24:69.24:0,69,1576	0/0:24,0:24:66.23:0,66,1516	0/0:18,0:18:54.18:0,54,912	0/0:17,0:17:48.16:0,48,818	0/0:34,0:34:99:0,99,1569	0/0:45,0:45:99:0,120,1777	0/0:20,0:20:54.16:0,54,1189	0/0:3,0:3:9.03:0,9,207	0/0:57,0:57:99:0,172,3834	0/0:8,0:8:21.07:0,21,467	0/0:10,0:10:24.08:0,24,521	0/0:44,0:44:99:0,132,2990	1/1:0,3:3:9.03:153,9,0	0/1:2,12:14:55.17:523,0,55	0/0:14,0:14:42.14:0,42,918	1/1:0,1:1:3.01:51,3,0
chr10	83859924	.	AAAG	A	682.43	PASS	AB=0.833;AC=13;AF=0.342;AN=38;BaseQRankSum=0.221;DP=175;FS=1.394;HRun=0;HaplotypeScore=26.1821;InbreedingCoeff=0.5241;MQ=73.51;MQ0=77;MQRankSum=-0.548;QD=14.22;ReadPosRankSum=1.202;VQSLOD=2.9677;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,6:3:9.03:141,9,0	1/1:0,3:3:3.01:47,3,0	0/0:19,0:9:12.34:0,12,122	0/0:22,0:8:9.50:0,9,157	0/0:8,0:7:15.05:0,15,312	./.	1/1:4,9:6:15.05:234,15,0	./.	./.	1/1:0,8:7:18.05:261,18,0	./.	./.	0/0:2,0:1:3.01:0,3,65	0/0:7,0:1:3.01:0,3,65	./.	1/1:1,3:2:2.90:47,3,0	./.	1/1:3,3:1:3.01:47,3,0	./.	0/0:5,0:5:9.03:0,9,168	0/0:9,0:5:12.04:0,12,259	0/0:5,0:5:0.47:0,0,1	0/0:7,0:7:12.04:0,12,232	0/0:6,0:5:15.05:0,15,322	0/0:2,0:2:3.01:0,3,65	0/1:4,1:2:40.91:41,0,57	0/0:3,0:1:3.01:0,3,65	./.
chr10	83860224	.	C	CT	1311.57	PASS	AC=38;AF=1.000;AN=38;DP=175;FS=0.000;HRun=1;HaplotypeScore=15.2230;InbreedingCoeff=-0.0263;MQ=13.51;MQ0=137;QD=12.61;VQSLOD=1.7793;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,1:1:3.01:38,3,0	./.	./.	./.	1/1:2,1:1:3.01:35,3,0	1/1:4,2:2:6.02:74,6,0	./.	./.	1/1:6,2:2:6.02:77,6,0	1/1:1,2:2:6.02:81,6,0	1/1:4,1:1:3.01:38,3,0	1/1:2,3:3:9.03:116,9,0	1/1:2,1:1:3.01:38,3,0	1/1:2,2:2:6.02:72,6,0	1/1:5,5:5:15.05:194,15,0	1/1:0,6:6:18.05:218,18,0	1/1:12,2:2:0.47:1,0,0	1/1:5,1:1:3.01:39,3,0	1/1:4,1:1:3.01:40,3,0	1/1:1,1:1:3.01:39,3,0	./.	./.	./.	./.	1/1:0,1:1:3.01:39,3,0	1/1:3,3:3:9.03:123,9,0	1/1:2,1:1:3.01:47,3,0	1/1:0,2:2:6.02:75,6,0
chr10	83860444	.	A	AC	990.25	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-4.387;DP=328;FS=2.820;HRun=3;HaplotypeScore=32.4264;InbreedingCoeff=0.8577;MQ=60.91;MQ0=4;MQRankSum=-1.624;QD=30.01;ReadPosRankSum=-0.491;VQSLOD=2.3956;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:51.15:0,51,606	0/0:4,0:4:12.04:0,12,144	0/0:18,0:13:37.36:0,37,434	0/0:17,0:13:38.90:0,39,434	0/0:8,0:7:18.05:0,18,213	0/0:14,0:14:39.10:0,39,455	0/0:14,0:13:39.12:0,39,467	0/0:8,0:8:21.06:0,21,244	0/0:8,0:8:24.07:0,24,288	0/0:18,0:15:45.14:0,45,538	0/0:11,0:11:21.06:0,21,251	0/0:9,0:9:27.08:0,27,323	0/0:11,0:11:30.08:0,30,347	0/0:12,0:12:36.11:0,36,431	0/0:17,0:17:51.16:0,51,609	0/0:17,0:16:45.10:0,45,521	0/0:15,0:14:42.13:0,42,503	0/0:8,0:7:18.06:0,18,216	0/0:2,0:2:3.01:0,3,36	0/0:3,0:3:9.03:0,9,108	0/0:19,0:19:54.17:0,54,647	0/0:5,0:5:15.05:0,15,180	0/0:3,0:3:9.03:0,9,108	0/0:21,0:21:54.07:0,54,605	1/1:0,8:8:18.06:252,18,0	1/1:2,19:21:54.18:748,54,0	0/0:13,0:13:36.10:0,36,422	1/1:0,4:4:9.03:126,9,0
chr10	83861153	.	CTT	C	1248.35	PASS	AB=0.617;AC=22;AF=0.393;AN=56;BaseQRankSum=4.559;DP=479;FS=2.321;HRun=18;HaplotypeScore=63.6305;InbreedingCoeff=0.7746;MQ=72.72;MQ0=2;MQRankSum=-1.375;QD=6.54;ReadPosRankSum=7.118;VQSLOD=-0.5512;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,13:23:28.44:191,28,0	0/1:5,7:14:3.78:54,0,4	0/0:29,0:16:12.09:0,12,142	0/0:20,0:9:3.11:0,3,10	0/0:18,1:23:12.17:0,12,229	0/0:14,0:15:34.82:0,35,325	0/1:4,5:10:0.83:73,0,1	0/0:30,0:35:57.21:0,57,559	0/0:10,0:13:23.48:0,23,222	1/1:14,3:18:12.92:89,13,0	1/1:10,15:25:21.78:212,22,0	0/0:9,0:9:16.19:0,16,139	0/0:16,0:16:3.36:0,3,181	0/0:8,0:9:23.33:0,23,205	1/1:2,10:14:20.25:133,20,0	1/1:2,7:11:11.30:78,11,0	1/1:10,14:26:31.93:225,32,0	1/1:8,11:20:3.48:145,3,0	0/0:10,0:13:4.82:0,5,78	0/0:25,0:25:29.33:0,29,396	0/0:9,0:10:23.47:0,23,212	0/0:12,0:12:27.05:0,27,305	0/0:20,0:23:41.75:0,42,416	0/0:12,0:17:40.15:0,40,381	1/1:3,0:8:13.89:70,14,0	1/1:7,2:19:30.28:149,30,0	0/0:11,1:18:10.04:0,10,212	1/1:1,0:2:5.66:34,6,0
chr10	83861285	.	A	AT	873.66	PASS	AB=0.605;AC=5;AF=0.089;AN=56;BaseQRankSum=-5.112;DP=595;FS=0.000;HRun=10;HaplotypeScore=83.5111;InbreedingCoeff=0.6657;MQ=74.09;MQ0=0;MQRankSum=-0.391;QD=15.06;ReadPosRankSum=1.861;VQSLOD=4.0498;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:40:99:0,101,815	0/0:6,0:6:17.94:0,18,141	0/0:27,0:24:18.73:0,19,280	0/0:23,0:14:7.06:0,7,97	0/0:24,0:24:62.91:0,63,517	0/0:16,0:16:41.93:0,42,344	0/0:24,0:25:55.94:0,56,449	0/0:29,1:30:32.65:0,33,459	0/0:19,2:21:28.22:0,28,429	0/0:23,0:23:47.93:0,48,394	0/0:25,0:25:62.88:0,63,516	0/0:12,0:12:32.96:0,33,271	0/0:14,0:14:20.94:0,21,172	0/0:17,0:17:44.92:0,45,366	0/0:16,0:16:38.93:0,39,320	0/0:12,1:13:1.02:0,1,214	0/0:32,0:32:68.87:0,69,562	0/0:18,1:19:14.61:0,15,314	0/0:25,0:25:53.80:0,54,434	0/0:24,0:24:68.91:0,69,566	0/0:14,0:14:35.93:0,36,292	0/0:17,0:17:7.27:0,7,264	0/0:30,0:30:62.87:0,63,515	0/0:28,0:28:77.91:0,78,640	1/1:5,23:28:51.13:544,51,0	0/1:7,14:23:8.20:344,0,8	0/0:16,0:16:41.94:0,42,342	1/1:2,4:7:11.86:110,12,0
chr10	83861300	.	C	CT	4885.20	PASS	AB=0.765;AC=18;AF=0.321;AN=56;BaseQRankSum=-6.792;DP=616;FS=4.820;HRun=9;HaplotypeScore=71.5123;InbreedingCoeff=0.8288;MQ=71.95;MQ0=0;MQRankSum=0.420;QD=20.19;ReadPosRankSum=2.269;VQSLOD=5.7390;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,37:43:76.22:1069,76,0	1/1:0,4:4:12.03:133,12,0	0/1:28,0:22:4.20:4,0,146	0/0:25,0:14:16.29:0,16,136	0/0:22,0:22:59.02:0,59,500	0/0:16,1:17:14.80:0,15,357	1/1:2,20:22:60.15:656,60,0	0/0:28,0:28:56.72:0,57,478	0/0:21,1:22:20.74:0,21,397	1/1:5,18:23:41.27:446,41,0	0/1:6,21:27:15.03:512,0,15	0/0:12,0:12:26.98:0,27,234	0/0:9,0:9:20.98:0,21,182	0/0:18,0:18:38.97:0,39,338	1/1:4,14:18:7:306,7,0	1/1:1,12:13:30.08:331,30,0	1/1:7,31:39:34.85:808,35,0	1/1:2,22:24:57.13:620,57,0	0/0:28,1:29:50.67:0,51,659	0/0:29,0:30:76.96:0,77,650	0/0:17,0:17:44.98:0,45,390	0/0:14,0:14:29.98:0,30,260	0/0:28,0:28:71.93:0,72,617	0/0:35,0:35:86.91:0,87,747	0/0:23,0:23:32.95:0,33,285	0/0:23,1:24:17.77:0,18,381	0/0:16,0:16:35.98:0,36,312	0/0:5,0:5:12:0,12,104
chr10	83861710	.	C	CCA	11554.70	PASS	AB=0.941;AC=25;AF=0.446;AN=56;BaseQRankSum=-14.036;DP=581;FS=3.676;HRun=0;HaplotypeScore=69.3228;InbreedingCoeff=0.9350;MQ=81.66;MQ0=0;MQRankSum=-2.132;QD=44.27;ReadPosRankSum=2.583;VQSLOD=6.5790;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,39:42:99:2112,120,0	1/1:1,14:17:45.15:795,45,0	0/0:16,0:16:42.14:0,42,573	0/0:17,0:16:44.33:0,44,564	0/0:23,0:23:60.20:0,60,824	0/0:24,0:24:66.21:0,66,892	1/1:1,20:21:60.21:1064,60,0	0/0:26,0:26:66.79:0,67,915	0/1:15,1:16:8.08:8,0,532	1/1:1,22:23:66.20:1130,66,0	1/1:2,11:13:36.12:634,36,0	0/0:15,0:15:42.10:0,42,541	0/0:16,0:16:45.14:0,45,602	0/0:20,0:20:60.20:0,60,823	1/1:2,15:18:45.15:793,45,0	1/1:2,12:14:29.97:532,30,0	1/1:4,26:30:75.26:1330,75,0	1/1:1,27:28:75.26:1315,75,0	0/0:15,0:15:36.10:0,36,465	0/0:24,0:24:60.18:0,60,799	0/0:39,0:39:99:0,111,1403	0/0:18,0:18:51.15:0,51,682	0/0:26,0:26:72.21:0,72,946	0/0:28,0:28:84.28:0,84,1154	1/1:0,12:12:36.12:639,36,0	1/1:1,18:20:57.11:937,57,0	0/0:13,0:13:36.12:0,36,494	1/1:2,5:7:15.05:266,15,0
chr10	83862302	.	G	GC	3081.44	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=10.132;DP=474;FS=8.585;HRun=3;HaplotypeScore=45.5036;InbreedingCoeff=0.9487;MQ=50.43;MQ0=8;MQRankSum=-7.575;QD=20.14;ReadPosRankSum=-4.769;VQSLOD=1.4113;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:29:42.10:565,42,0	1/1:0,13:12:18.06:249,18,0	0/0:5,0:3:9.03:0,9,108	0/0:7,0:1:3.01:0,3,36	0/0:13,0:13:39.12:0,39,465	0/0:21,0:21:60.18:0,60,719	1/1:3,12:16:18.02:229,18,0	0/0:28,0:24:72.22:0,72,855	0/0:25,0:25:72.22:0,72,864	1/1:1,14:14:42.11:567,42,0	1/1:0,11:11:18.02:229,18,0	0/0:16,0:16:48.15:0,48,576	0/0:8,0:8:24.06:0,24,276	0/0:18,0:18:48.15:0,48,576	1/1:0,16:16:24.08:336,24,0	1/1:0,16:15:30.10:412,30,0	1/1:3,19:21:33.11:459,33,0	1/1:1,11:12:18.06:248,18,0	0/0:4,0:4:9.03:0,9,108	0/0:16,0:16:42.13:0,42,503	0/0:21,0:20:60.18:0,60,719	0/0:18,0:17:45.14:0,45,539	0/0:13,0:11:33.09:0,33,384	0/0:22,0:22:63.19:0,63,756	0/0:20,0:20:60.18:0,60,719	0/0:25,0:25:63.19:0,63,755	0/0:29,0:28:84.26:0,84,1006	0/0:12,0:12:21.06:0,21,252
chr10	83863082	.	G	GA	11833.08	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=5.426;DP=720;FS=1.572;HRun=1;HaplotypeScore=97.1268;InbreedingCoeff=0.9978;MQ=78.23;MQ0=0;MQRankSum=-4.988;QD=39.58;ReadPosRankSum=2.424;VQSLOD=5.2465;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,58:58:99:2446,154,0	1/1:0,10:10:30.10:479,30,0	0/0:15,0:15:44.86:0,45,552	0/0:19,0:19:53.78:0,54,668	0/0:21,0:21:63.21:0,63,880	0/0:27,0:27:78.26:0,78,1091	1/1:0,32:32:87.30:1391,87,0	0/0:20,0:20:60.20:0,60,839	0/0:28,0:28:84.28:0,84,1170	1/1:0,24:24:69.24:1103,69,0	1/1:0,7:7:18.06:288,18,0	0/0:42,0:42:99:0,123,1713	0/0:25,0:25:72.24:0,72,1007	0/0:29,0:29:87.28:0,87,1198	1/1:0,34:34:96.18:1535,96,0	1/1:0,28:28:81.28:1295,81,0	1/1:0,31:31:90.31:1439,90,0	1/1:0,30:30:81.28:1295,81,0	0/0:31,0:31:87.28:0,87,1197	0/0:10,0:10:30.10:0,30,418	0/0:69,0:69:99:0,208,2876	0/0:18,0:18:51.15:0,51,676	0/0:14,0:14:36.12:0,36,502	0/0:34,0:34:99:0,102,1427	1/1:0,0:12:33.51:176,34,0	1/1:4,1:24:43.03:298,43,0	0/0:19,0:19:57.19:0,57,797	1/1:0,0:9:19.29:89,19,0
chr10	83863701	.	TGG	T	2654.13	PASS	AB=0.955;AC=19;AF=0.339;AN=56;BaseQRankSum=12.332;DP=444;FS=4.769;HRun=3;HaplotypeScore=84.9002;InbreedingCoeff=0.9067;MQ=63.32;MQ0=2;MQRankSum=-9.387;QD=15.43;ReadPosRankSum=6.854;VQSLOD=0.7705;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:27:27.09:341,27,0	1/1:1,7:8:15.52:183,16,0	0/0:26,0:19:29.95:0,30,460	0/0:11,0:9:10.98:0,11,202	0/0:11,0:11:24.06:0,24,369	0/0:16,0:16:42.09:0,42,612	1/1:29,1:30:53.46:302,53,0	0/0:16,0:15:36.08:0,36,602	0/0:23,0:23:58.60:0,59,735	1/1:0,9:9:24.03:285,24,0	1/1:0,3:5:3.01:38,3,0	0/0:10,0:10:27.05:0,27,393	0/0:15,0:15:36.07:0,36,565	0/0:22,0:22:57.04:0,57,751	1/1:6,15:21:54.14:681,54,0	1/1:0,12:12:33.11:424,33,0	1/1:0,19:19:30.10:379,30,0	1/1:19,1:20:39.50:227,40,0	0/0:10,0:9:18.03:0,18,229	0/0:10,0:10:17.96:0,18,257	0/0:42,0:41:96.83:0,97,1429	0/0:9,0:9:12.50:0,13,178	0/0:7,0:7:14.25:0,14,208	0/0:19,0:19:54.12:0,54,851	0/0:7,0:7:17.34:0,17,172	0/1:20,1:21:0.44:0,0,444	0/0:10,0:10:24.05:0,24,331	0/0:7,0:6:14.32:0,14,187
chr10	83863705	.	TGG	T	1474.92	PASS	AB=0.926;AC=19;AF=0.339;AN=56;BaseQRankSum=12.847;DP=446;FS=5.241;HRun=10;HaplotypeScore=88.7036;InbreedingCoeff=0.8621;MQ=62.17;MQ0=2;MQRankSum=-8.038;QD=8.53;ReadPosRankSum=7.560;VQSLOD=0.1369;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,11:25:7.89:145,8,0	1/1:3,4:7:12.46:101,12,0	0/1:23,1:18:16.07:16,0,309	0/0:12,0:9:17.95:0,18,197	0/0:11,0:11:21.04:0,21,285	0/0:15,0:17:32.52:0,33,404	1/1:8,0:29:46.40:201,46,0	0/0:16,0:17:26.56:0,27,366	0/0:19,0:21:59.01:0,59,755	1/1:6,5:11:23.45:191,23,0	1/1:2,3:5:3:26,3,0	0/0:13,0:13:37.88:0,38,463	0/0:11,0:13:35.43:0,35,393	0/0:19,0:21:49.39:0,49,504	1/1:6,15:21:41.92:365,42,0	1/1:2,10:12:30:263,30,0	1/1:10,10:20:23.99:209,24,0	1/1:2,0:18:38.04:164,38,0	0/0:10,0:11:18.02:0,18,216	0/0:10,0:10:21.05:0,21,279	0/0:36,0:39:76.90:0,77,886	0/0:7,0:8:11.86:0,12,129	0/0:9,0:9:17.95:0,18,211	0/0:25,0:25:63.13:0,63,822	0/0:2,0:7:17.34:0,17,59	0/0:5,0:19:33.64:0,34,123	0/0:8,0:10:25.99:0,26,277	0/0:1,0:6:12.48:0,12,43
chr10	83864365	.	T	TAAAAAAAAAGTATATCCATTCAAAAAA	16967.30	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.504;DP=640;FS=4.582;HRun=0;HaplotypeScore=420.8849;InbreedingCoeff=0.9989;MQ=78.71;MQ0=0;MQRankSum=-12.005;QD=157.10;ReadPosRankSum=-3.423;VQSLOD=3.0366;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:90.31:0,90,4881	0/0:14,0:14:33.11:0,33,1921	0/0:21,0:21:39.13:0,39,1396	0/0:16,0:15:21.74:0,22,828	0/0:25,0:25:51.13:0,51,2710	0/0:23,0:24:57.15:0,57,3231	1/1:18,0:18:45.15:3307,45,0	0/0:34,0:35:69.07:0,69,2766	0/0:19,0:19:42.13:0,42,2284	0/0:27,0:28:66.22:0,66,3326	0/0:16,0:16:39.13:0,39,2510	0/0:17,0:17:42.10:0,42,2233	0/0:19,0:19:51.13:0,51,2620	0/0:20,0:20:48.12:0,48,2427	0/0:23,0:23:57.18:0,57,3106	0/0:24,0:24:54.14:0,54,3023	0/0:25,0:25:60.21:0,60,3437	1/1:20,0:20:46.36:2962,46,0	0/0:18,0:18:30.10:0,30,1772	0/0:28,0:28:60.15:0,60,3385	0/0:24,0:24:51.14:0,51,2744	0/0:17,0:18:33.11:0,33,1765	0/0:23,0:23:54.09:0,54,2513	0/0:19,0:19:42.14:0,42,2436	1/1:18,1:20:48.16:3622,48,0	1/1:22,0:28:66.21:4395,66,0	0/0:36,0:36:96.33:0,96,5993	1/1:22,0:22:57.18:2681,57,0
chr10	83865943	.	TG	T	791.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.762;DP=503;FS=0.000;HRun=7;HaplotypeScore=51.3429;InbreedingCoeff=0.9137;MQ=82.63;MQ0=0;MQRankSum=-2.730;QD=22.63;ReadPosRankSum=2.603;VQSLOD=3.3515;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.18:0,60,742	0/0:6,0:6:18.06:0,18,226	0/0:15,0:14:33.16:0,33,389	0/0:22,0:21:47.59:0,48,550	0/0:8,0:8:24.06:0,24,288	0/0:18,0:18:45.13:0,45,553	0/0:22,0:22:63.20:0,63,792	0/0:22,0:22:54.16:0,54,668	0/0:16,0:16:45.13:0,45,549	0/0:12,0:12:27.08:0,27,329	0/0:6,0:6:18.06:0,18,226	0/0:23,0:23:66.20:0,66,819	0/0:9,0:9:21.07:0,21,264	0/0:29,0:29:81.22:0,81,981	0/0:23,0:23:66.20:0,66,819	0/0:15,0:15:45.13:0,45,553	0/0:31,0:31:81.23:0,81,1003	1/1:4,31:35:87.20:887,87,0	0/0:16,0:16:36.68:0,37,505	0/0:12,0:12:36.10:0,36,439	0/0:51,0:51:99:0,147,1823	0/0:6,0:6:18.06:0,18,226	0/0:9,0:9:15.03:0,15,174	0/0:32,0:32:87.28:0,87,1094	0/0:5,0:5:15.05:0,15,189	0/0:14,0:14:36.10:0,36,440	0/0:22,0:22:66.21:0,66,830	0/0:4,0:4:12.03:0,12,138
chr10	83868515	.	T	TC	1847.76	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-10.744;DP=788;FS=7.387;HRun=4;HaplotypeScore=75.2551;InbreedingCoeff=0.9997;MQ=89.13;MQ0=0;MQRankSum=-1.934;QD=30.80;ReadPosRankSum=-0.091;VQSLOD=3.7713;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,147,1656	0/0:11,0:11:30.02:0,30,306	0/0:24,0:24:60.10:0,60,642	0/0:37,0:37:81.74:0,82,857	0/0:26,0:26:78.21:0,78,873	0/0:14,0:14:39.09:0,39,424	1/1:5,37:42:99:1354,99,0	0/0:45,0:45:99:0,123,1362	0/0:32,0:32:96.27:0,96,1089	0/0:29,0:29:75.17:0,75,836	0/0:15,0:15:39.11:0,39,442	0/0:40,0:40:99:0,114,1266	0/0:24,0:24:66.19:0,66,748	0/0:36,0:36:96.26:0,96,1079	0/0:33,0:33:96.26:0,96,1079	0/0:31,0:31:84.23:0,84,945	0/0:28,0:28:84.19:0,84,921	1/1:2,16:18:45.15:615,45,0	0/0:21,0:21:57.11:0,57,616	0/0:24,0:24:69.15:0,69,768	0/0:42,0:42:99:0,126,1399	0/0:22,0:22:63.17:0,63,705	0/0:23,0:23:69.18:0,69,772	0/0:32,0:32:81.23:0,81,919	0/0:18,0:18:54.15:0,54,612	0/0:26,0:26:75.21:0,75,849	0/0:20,0:20:60.15:0,60,664	0/0:20,0:20:57.16:0,57,646
chr10	83869361	.	CG	C	6028.64	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=13.037;DP=555;FS=7.796;HRun=6;HaplotypeScore=65.4332;InbreedingCoeff=0.9987;MQ=76.53;MQ0=0;MQRankSum=-0.474;QD=27.65;ReadPosRankSum=3.975;VQSLOD=5.3633;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:84.24:0,84,1072	1/1:0,10:10:23.59:257,24,0	0/0:12,0:12:27.04:0,27,320	0/0:13,0:13:23.97:0,24,352	0/0:21,0:21:60.13:0,60,739	0/0:12,0:12:36.09:0,36,443	1/1:2,28:30:78.16:838,78,0	0/0:25,0:25:60.17:0,60,744	0/0:15,0:15:45.11:0,45,558	1/1:0,15:15:45.06:464,45,0	1/1:2,13:15:33.08:355,33,0	0/0:19,0:19:51.15:0,51,654	0/0:20,0:20:51.13:0,51,639	0/0:28,0:28:75.24:0,75,975	1/1:1,15:16:39.10:419,39,0	1/1:2,15:17:42.10:451,42,0	1/1:4,33:37:93.23:998,93,0	1/1:4,31:35:53.76:927,54,0	0/0:9,0:9:27.09:0,27,354	0/0:10,0:10:27.07:0,27,339	0/0:46,0:46:99:0,123,1583	0/0:13,0:13:36.05:0,36,436	0/0:13,0:13:36.11:0,36,463	0/0:30,0:30:90.28:0,90,1163	1/1:2,14:16:45.11:482,45,0	1/1:0,17:17:51.13:548,51,0	0/0:17,0:17:45.13:0,45,570	1/1:0,10:10:27.07:290,27,0
chr10	83869407	.	CCCGACT	C	761.93	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=5.201;DP=555;FS=13.377;HRun=0;HaplotypeScore=127.4251;InbreedingCoeff=0.6437;MQ=80.99;MQ0=0;MQRankSum=-5.175;QD=20.05;ReadPosRankSum=0.312;VQSLOD=2.4337;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.29:0,84,3032	0/0:9,0:9:27.09:0,27,984	0/1:18,0:18:16.33:16,0,1234	0/0:13,0:13:31.65:0,32,802	0/0:20,0:20:57.18:0,57,1948	0/0:11,0:11:33.11:0,33,1194	0/0:36,0:36:99:0,102,3567	0/0:16,0:16:45.13:0,45,1329	0/0:16,0:16:48.16:0,48,1668	0/0:20,0:20:60.20:0,60,2037	0/0:9,0:9:27.09:0,27,904	0/0:22,0:22:66.23:0,66,2376	0/0:24,0:24:69.12:0,69,2092	0/0:31,0:31:87.28:0,87,2941	0/0:18,0:18:45.15:0,45,1618	0/0:15,0:15:45.15:0,45,1528	0/0:40,0:40:99:0,117,4120	0/0:30,0:30:87.30:0,87,3086	0/0:17,0:17:48.14:0,48,1538	0/0:8,0:8:24.08:0,24,797	0/0:24,0:24:72.23:0,72,2471	0/0:14,0:14:39.13:0,39,1293	0/0:18,0:18:51.18:0,51,1680	0/0:31,0:31:93.32:0,93,3335	1/1:1,19:20:36.12:851,36,0	0/0:22,0:22:66.23:0,66,2175	0/0:19,0:19:48.13:0,48,1609	0/0:6,0:6:15.05:0,15,500
chr10	83870786	.	CT	C	1613.93	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.303;DP=703;FS=3.282;HRun=5;HaplotypeScore=75.4480;InbreedingCoeff=0.9991;MQ=86.53;MQ0=0;MQRankSum=-2.318;QD=28.31;ReadPosRankSum=0.541;VQSLOD=3.8529;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,117,1581	0/0:10,0:10:27.09:0,27,369	0/0:23,0:23:66.10:0,66,849	0/0:26,0:26:42.33:0,42,768	0/0:41,0:41:99:0,108,1432	0/0:17,0:17:48.16:0,48,656	1/1:3,23:26:66.19:749,66,0	0/0:37,0:37:96.32:0,96,1313	0/0:19,0:19:54.17:0,54,723	0/0:27,0:27:75.24:0,75,1002	0/0:15,0:15:42.13:0,42,558	0/0:23,0:23:69.20:0,69,912	0/0:26,0:26:75.22:0,75,985	0/0:20,0:20:60.20:0,60,821	0/0:33,0:33:96.32:0,96,1313	0/0:27,0:27:78.26:0,78,1067	0/0:39,0:39:99:0,114,1510	1/1:1,30:31:87.25:987,87,0	0/0:28,0:28:84.28:0,84,1149	0/0:27,0:27:75.22:0,75,981	0/0:26,0:26:78.24:0,78,1050	0/0:18,0:18:54.17:0,54,722	0/0:16,0:16:42.14:0,42,574	0/0:20,0:20:60.20:0,60,817	0/0:14,0:14:42.14:0,42,575	0/0:32,0:32:96.29:0,96,1269	0/0:27,0:27:72.24:0,72,984	0/0:10,0:10:30.10:0,30,410
chr10	83871611	.	T	TACAC	1715.61	PASS	AB=1.000;AC=31;AF=0.574;AN=54;BaseQRankSum=-1.971;DP=573;FS=0.944;HRun=0;HaplotypeScore=117.8147;InbreedingCoeff=0.4787;MQ=71.13;MQ0=12;MQRankSum=0.226;QD=5.20;ReadPosRankSum=-0.531;VQSLOD=2.2298;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:44,0:43:30.02:411,30,0	1/1:2,3:5:2.54:69,3,0	./.	0/1:25,0:18:0:0,0,0	0/0:17,0:17:6.02:0,6,92	1/1:10,6:16:6.02:139,6,0	0/0:25,0:24:11.80:0,12,184	1/1:18,0:16:4.41:14,4,0	0/0:13,0:13:2.99:0,3,25	1/1:21,0:19:15.05:235,15,0	1/1:15,5:19:1.82:68,2,0	0/0:22,0:25:9.18:0,9,98	0/0:8,0:8:2.89:0,3,25	1/1:24,0:24:2.57:41,3,0	1/1:14,0:14:18.03:229,18,0	1/1:12,2:13:18.03:295,18,0	1/1:25,8:39:7.38:144,7,0	1/1:18,13:31:3.57:79,4,0	0/0:10,0:10:1.66:0,2,33	0/0:17,0:18:6:0,6,54	0/0:50,0:50:11.96:0,12,123	1/1:8,0:8:3:25,3,0	0/1:9,0:10:2.79:3,0,60	0/1:17,0:16:34.69:35,0,40	1/1:14,0:14:8.99:89,9,0	0/0:9,0:17:6.01:0,6,56	0/0:16,0:17:6.01:0,6,66	1/1:8,0:8:2.22:7,2,0
chr10	83872362	.	CACACACACAT	C	6272.15	PASS	AB=0.731;AC=10;AF=0.179;AN=56;BaseQRankSum=11.484;DP=1304;FS=1.766;HRun=0;HaplotypeScore=380.8162;InbreedingCoeff=0.7132;MQ=48.78;MQ0=37;MQRankSum=-11.947;QD=30.30;ReadPosRankSum=0.104;VQSLOD=3.1666;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:60:99:0,138,5890	1/1:1,9:10:15.01:392,15,0	0/0:41,0:7:18.06:0,18,472	0/0:55,0:11:23.59:0,24,644	0/0:44,0:43:95.97:0,96,4233	0/0:28,0:27:54.15:0,54,2455	0/0:45,0:44:39.49:0,39,2477	0/0:92,0:69:99:0,118,3970	0/0:42,0:42:93.32:0,93,4266	0/1:50,25:64:37.24:3155,0,37	1/1:8,15:22:2.79:93,3,0	0/0:52,0:52:99:0,132,5827	0/0:52,0:50:99:0,126,5586	0/0:57,0:53:99:0,126,5271	1/1:16,26:42:18.32:677,18,0	1/1:16,19:33:59.88:1338,60,0	0/1:12,8:19:9.34:616,0,9	0/0:33,0:32:78.16:0,78,2885	0/0:28,0:18:37.84:0,38,1513	0/0:32,0:31:54.65:0,55,3214	0/0:155,0:151:99:0,279,13939	0/0:37,0:37:93.31:0,93,3980	0/0:50,0:49:99:0,111,4459	0/0:46,0:45:84.20:0,84,3408	0/0:49,0:49:93.32:0,93,4044	0/0:62,0:54:81.49:0,81,5055	0/0:23,0:23:45.16:0,45,2232	0/0:10,0:9:27.09:0,27,1047
chr10	83872420	.	TAC	T	575.24	PASS	AB=0.667;AC=3;AF=0.056;AN=54;BaseQRankSum=6.460;DP=1492;FS=22.058;HRun=0;HaplotypeScore=244.3052;InbreedingCoeff=0.4794;MQ=42.48;MQ0=200;MQRankSum=-4.259;QD=8.10;ReadPosRankSum=-0.245;VQSLOD=1.4072;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:68,0:66:99:0,109,1812	0/0:16,0:11:8.46:0,8,66	./.	0/0:43,0:2:3.01:0,3,40	0/0:38,1:34:81.20:0,81,1290	0/0:32,0:28:62.97:0,63,1016	0/0:32,1:27:29.75:0,30,368	0/0:148,5:93:64.83:0,65,1953	0/0:59,0:55:99:0,117,1946	0/0:94,3:65:52.19:0,52,590	0/0:17,0:13:6.02:0,6,74	0/0:66,0:59:99:0,121,1934	0/0:65,0:57:99:0,144,2338	0/0:61,0:51:99:0,123,1982	0/0:48,0:39:8.22:0,8,55	0/0:41,0:33:24.83:0,25,107	0/0:25,0:20:10.74:0,11,86	0/0:23,0:18:34.81:0,35,419	0/0:59,0:23:51.10:0,51,702	0/0:52,0:42:99:0,105,1632	0/0:166,5:155:99:0,309,4987	0/0:53,0:47:99:0,117,1876	0/0:50,0:47:99:0,120,1912	0/0:44,0:41:84.11:0,84,1295	0/0:32,0:29:34.74:0,35,412	1/1:52,7:32:34.95:530,35,0	0/0:28,0:27:61:0,61,951	0/1:6,6:12:30.85:150,0,31
chr10	83872442	.	CAT	C	2444.12	PASS	AB=0.803;AC=15;AF=0.278;AN=54;BaseQRankSum=13.879;DP=1371;FS=33.963;HRun=0;HaplotypeScore=232.6775;InbreedingCoeff=0.2438;MQ=41.72;MQ0=217;MQRankSum=-9.372;QD=6.23;ReadPosRankSum=-2.789;VQSLOD=1.4874;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:50:99:0,100,1687	1/1:11,3:8:5.96:91,6,0	./.	0/0:10,0:1:3.01:0,3,38	0/0:37,0:30:69.19:0,69,1222	0/0:35,0:31:71.27:0,71,1093	0/1:41,4:33:99:134,0,177	0/0:152,0:74:70.69:0,71,2037	0/0:70,0:63:99:0,150,2560	0/1:63,22:50:25.21:990,0,25	1/1:10,8:12:3.01:31,3,0	0/0:63,0:57:99:0,120,2051	0/0:56,0:50:99:0,129,2185	0/0:59,0:50:99:0,134,2177	1/1:28,21:41:5.39:91,5,0	0/1:18,14:27:24.54:351,0,25	0/1:15,9:20:13.18:129,0,13	0/1:30,2:26:99:102,0,459	0/0:50,0:19:48.89:0,49,714	0/0:53,0:41:99:0,111,1730	0/0:167,2:148:99:0,287,4936	0/0:58,0:50:99:0,128,2332	0/0:45,0:40:99:0,102,1699	0/0:35,0:33:77.81:0,78,1367	1/1:13,10:20:17.49:193,17,0	0/1:51,7:26:51.65:372,0,52	0/0:25,0:23:57.98:0,58,931	0/1:5,5:8:44.77:123,0,45
chr10	83872460	.	CAT	C	394.77	PASS	AB=0.981;AC=9;AF=0.173;AN=52;BaseQRankSum=7.975;DP=1272;FS=13.866;HRun=0;HaplotypeScore=232.4867;InbreedingCoeff=0.0723;MQ=42.74;MQ0=205;MQRankSum=-5.638;QD=1.44;ReadPosRankSum=-7.368;VQSLOD=-0.5821;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:49:99:0,108,1817	0/1:13,1:7:16.92:17,0,18	./.	./.	0/0:38,0:33:69.09:0,69,1101	0/0:29,0:26:56.89:0,57,1092	0/0:50,1:37:13.09:0,13,385	0/0:124,1:48:63.73:0,64,1506	0/0:78,0:71:99:0,174,2853	0/1:71,0:41:64.48:64,0,359	1/1:17,0:10:2.90:16,3,0	0/0:61,0:57:99:0,129,2205	0/0:46,0:41:99:0,111,1894	0/0:53,0:47:99:0,120,2132	0/1:54,1:48:10.98:76,0,11	0/1:36,0:31:83.55:145,0,84	0/0:23,1:20:0.85:0,1,74	0/0:35,0:29:27.03:0,27,930	0/0:36,0:15:38.78:0,39,657	0/0:56,0:45:99:0,123,2021	0/0:153,3:131:99:0,240,4219	0/0:57,0:49:99:0,135,2259	0/0:39,0:34:87.20:0,87,1425	0/0:36,0:35:74.77:0,75,1277	0/1:16,0:11:0:0,0,0	0/1:54,1:29:99:193,0,139	0/0:25,0:22:54.49:0,54,831	0/1:9,0:7:9.86:10,0,87
chr10	83872470	.	T	TAC	1835.35	PASS	AB=0.973;AC=13;AF=0.250;AN=52;BaseQRankSum=6.445;DP=1260;FS=3.774;HRun=0;HaplotypeScore=216.0412;InbreedingCoeff=0.6673;MQ=43.88;MQ0=196;MQRankSum=-3.922;QD=6.65;ReadPosRankSum=-7.375;VQSLOD=1.6398;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:50:73.21:0,73,1179	1/1:12,0:5:8.93:144,9,0	./.	./.	0/0:34,0:29:51.12:0,51,616	0/0:28,0:25:48.04:0,48,623	0/1:51,0:39:0.61:1,0,471	0/0:126,0:57:90.36:0,90,1176	0/0:73,0:66:99:0,127,1774	0/1:65,3:43:99:470,0,144	1/1:13,1:7:9.03:141,9,0	0/0:66,0:63:99:0,144,1824	0/0:46,0:42:99:0,99,1256	0/0:56,0:50:99:0,105,1341	1/1:47,3:43:29.44:400,29,0	1/1:35,3:32:47.73:555,48,0	0/1:21,1:19:15.62:112,0,16	0/0:35,0:30:65.11:0,65,900	0/0:35,0:15:30.10:0,30,389	0/0:58,0:48:99:0,117,1509	0/0:140,0:118:99:0,215,2726	0/0:59,0:52:99:0,123,1531	0/0:33,0:28:66.17:0,66,824	0/0:33,0:32:62.95:0,63,791	1/1:19,0:15:6.14:177,6,0	0/0:59,0:29:56.48:0,56,530	0/0:26,0:23:44.27:0,44,635	0/0:7,0:5:5.99:0,6,62
chr10	83872512	.	CCA	C	1904.60	PASS	AB=0.917;AC=5;AF=0.089;AN=56;BaseQRankSum=7.683;DP=1379;FS=4.425;HRun=0;HaplotypeScore=207.4416;InbreedingCoeff=0.7791;MQ=48.60;MQ0=72;MQRankSum=-0.050;QD=16.28;ReadPosRankSum=-0.454;VQSLOD=3.3768;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,105,1716	0/0:15,0:13:36.12:0,36,606	0/0:65,2:9:21.03:0,21,319	0/0:64,0:6:16.28:0,16,214	0/0:36,0:33:90.31:0,90,1486	0/0:25,0:25:63.21:0,63,1028	1/1:23,22:40:73:859,73,0	0/0:146,0:111:99:0,193,2877	0/0:61,0:60:99:0,156,2512	0/0:75,0:59:99:0,157,2524	0/0:19,1:17:30.10:0,30,499	0/0:73,0:72:99:0,190,3039	0/0:55,0:53:99:0,132,2177	0/0:42,0:39:99:0,111,1809	0/0:59,0:57:99:0,111,1769	0/0:37,0:36:89.99:0,90,1483	0/1:30,3:31:8.88:9,0,856	1/1:8,30:37:33.73:1164,34,0	0/0:29,0:16:11.26:0,11,479	0/0:51,0:51:99:0,138,2289	0/0:116,1:111:99:0,253,4092	0/0:52,0:50:99:0,120,1943	0/0:31,0:30:78.24:0,78,1252	0/0:36,0:36:84.26:0,84,1388	0/0:18,1:18:19.23:0,19,585	0/0:64,1:52:74.52:0,75,1624	0/0:20,0:19:51.11:0,51,802	0/0:14,0:12:21.07:0,21,353
chr10	83872566	.	T	TAC	714.98	PASS	AB=0.992;AC=14;AF=0.250;AN=56;BaseQRankSum=17.581;DP=1394;FS=0.353;HRun=0;HaplotypeScore=203.8936;InbreedingCoeff=0.0609;MQ=50.08;MQ0=91;MQRankSum=0.804;QD=1.44;ReadPosRankSum=4.167;VQSLOD=2.5072;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:52,1:51:33.44:83,0,33	0/1:17,0:16:23.72:24,0,101	0/0:38,0:9:11.75:0,12,74	0/0:52,0:18:38.06:0,38,360	0/0:34,0:33:84.27:0,84,1099	0/0:33,0:33:81.05:0,81,1024	0/1:48,1:46:62.04:62,0,102	0/0:138,1:78:99:0,151,1876	0/0:57,0:56:99:0,135,1759	0/1:81,0:69:0.51:1,0,364	0/1:26,0:26:17.31:25,0,17	0/0:64,0:63:99:0,159,2070	0/0:57,0:55:99:0,120,1555	0/0:56,0:53:99:0,126,1742	0/1:49,0:45:63.44:63,0,86	0/1:48,0:46:99:120,0,117	1/1:42,0:40:20.66:178,21,0	0/1:33,1:33:55.23:128,0,55	0/0:47,1:14:36.12:0,36,473	0/0:37,0:36:90.27:0,90,1173	0/0:134,2:116:99:0,253,3299	0/0:39,0:39:96.25:0,96,1211	0/0:35,0:35:81.25:0,81,1059	0/0:48,0:47:99:0,111,1431	0/1:23,0:23:39.04:39,0,74	0/1:53,1:48:99:123,0,213	0/0:20,0:20:41.99:0,42,515	1/1:18,0:17:11.80:32,12,0
chr10	83872574	.	T	TAC	16559.87	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-10.829;DP=1357;FS=13.512;HRun=0;HaplotypeScore=156.3687;InbreedingCoeff=0.9930;MQ=50.65;MQ0=78;MQRankSum=2.027;QD=32.99;ReadPosRankSum=2.307;VQSLOD=6.3774;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,31:50:99:1975,120,0	1/1:9,8:16:33.11:560,33,0	0/0:38,0:7:10.21:0,10,100	0/0:50,0:19:42.04:0,42,478	0/0:31,0:31:81.23:0,81,1043	0/0:31,0:31:81.14:0,81,1076	1/1:34,17:48:77.45:1248,77,0	0/0:127,1:74:99:0,147,1778	0/0:57,0:57:99:0,144,1885	1/1:50,36:76:99:2596,117,0	1/1:12,16:28:60.21:1024,60,0	0/0:60,0:60:99:0,156,2009	0/0:54,0:52:99:0,132,1702	0/0:53,0:52:99:0,139,1877	1/1:35,21:51:99:1670,105,0	1/1:15,29:43:99:1653,99,0	1/1:15,28:42:99:1809,108,0	1/1:20,14:33:87.60:1317,88,0	0/0:38,1:14:42.02:0,42,500	0/0:38,0:36:87.24:0,87,1123	0/0:129,3:115:99:0,259,3359	0/0:35,0:35:90.26:0,90,1153	0/0:31,0:31:81.24:0,81,1039	0/0:53,0:53:99:0,120,1535	1/1:3,18:21:39.13:653,39,0	1/1:31,22:47:99:1691,105,0	0/0:21,0:21:48.16:0,48,636	1/1:1,16:16:21.07:364,21,0
chr10	83872696	.	CACAT	C	373.66	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=8.986;DP=1382;FS=2.243;HRun=0;HaplotypeScore=244.3480;InbreedingCoeff=0.5547;MQ=50.04;MQ0=103;MQRankSum=-4.032;QD=5.19;ReadPosRankSum=-4.016;VQSLOD=1.9414;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:51:99:0,99,2629	0/0:18,0:18:39.12:0,39,936	0/0:14,0:3:6.01:0,6,99	0/0:28,0:6:5.15:0,5,113	0/0:28,0:28:84.04:0,84,1849	0/0:31,0:30:68.50:0,68,1690	1/1:29,13:34:31.94:404,32,0	0/0:158,0:103:99:0,114,3411	0/0:43,0:42:99:0,111,2682	0/0:87,0:76:99:0,213,4522	0/0:24,0:23:51.14:0,51,1181	0/0:67,0:67:99:0,187,4351	0/0:39,0:39:99:0,102,2407	0/0:41,0:39:77.16:0,77,2143	0/0:67,0:65:99:0,138,2984	0/0:68,0:67:99:0,135,3416	0/0:38,0:37:90.47:0,90,2142	0/1:30,0:29:75.60:76,0,672	0/0:55,0:23:60.01:0,60,1320	0/0:31,0:30:77.99:0,78,1853	0/0:129,0:114:99:0,242,5631	0/0:41,0:39:99:0,111,2326	0/0:38,0:38:99:0,102,2149	0/0:55,0:55:99:0,153,3710	0/0:37,0:37:96:0,96,2315	0/0:65,0:52:99:0,141,3201	0/0:28,0:25:64.99:0,65,1352	0/0:15,0:14:42.12:0,42,1012
chr10	83872706	.	CAT	C	261.72	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.002;DP=1359;FS=0.594;HRun=0;HaplotypeScore=195.2450;InbreedingCoeff=0.8533;MQ=49.91;MQ0=91;MQRankSum=-3.811;QD=3.97;ReadPosRankSum=-2.721;VQSLOD=2.6809;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:49:88.54:0,89,1981	0/0:17,0:17:43.16:0,43,613	0/0:9,0:2:3:0,3,25	0/0:16,0:2:5.61:0,6,48	0/0:27,0:27:80.80:0,81,1358	0/0:30,0:28:66.06:0,66,1230	1/1:36,0:30:20.67:117,21,0	0/0:167,4:107:99:0,107,2712	0/0:45,0:44:99:0,129,2162	0/0:80,0:69:99:0,186,3436	0/0:23,0:22:48.15:0,48,881	0/0:68,0:68:99:0,193,3326	0/0:37,0:37:99:0,106,1767	0/0:38,0:36:93.06:0,93,1608	0/0:63,2:63:99:0,133,2377	0/0:69,0:68:99:0,150,2611	0/0:42,0:41:99:0,115,1836	1/1:29,0:29:12.90:260,13,0	0/0:53,0:21:53.95:0,54,862	0/0:32,0:32:83.46:0,83,1390	0/0:128,0:115:99:0,250,4451	0/0:39,0:38:99:0,107,1832	0/0:37,0:37:81.97:0,82,1465	0/0:60,0:60:99:0,174,2737	0/0:40,0:40:99:0,108,1853	0/0:68,0:54:99:0,158,2659	0/0:29,0:25:65.12:0,65,1062	0/0:15,0:14:42.14:0,42,767
chr10	83872708	.	TAC	T	848.25	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=8.481;DP=1341;FS=0.642;HRun=0;HaplotypeScore=189.7172;InbreedingCoeff=0.9988;MQ=49.95;MQ0=92;MQRankSum=-3.100;QD=13.25;ReadPosRankSum=-2.417;VQSLOD=3.2313;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:96.23:0,96,1732	0/0:17,0:17:34.27:0,34,495	./.	./.	0/0:27,0:27:77.91:0,78,1188	0/0:30,0:28:44.61:0,45,1107	1/1:26,10:30:23.90:273,24,0	0/0:159,2:98:99:0,149,2239	0/0:46,0:45:99:0,123,1956	0/0:81,0:70:99:0,182,2941	0/0:23,0:22:45.14:0,45,726	0/0:66,0:66:99:0,183,2928	0/0:37,0:37:96.19:0,96,1568	0/0:38,0:36:84.06:0,84,1368	0/0:65,0:63:99:0,126,2003	0/0:67,0:67:99:0,144,2274	0/0:42,0:42:68.33:0,68,1648	1/1:15,12:27:56.96:696,57,0	0/0:51,0:20:48.07:0,48,724	0/0:34,0:34:84.24:0,84,1278	0/0:124,0:110:99:0,238,3865	0/0:39,0:38:99:0,99,1587	0/0:37,0:37:81.02:0,81,1255	0/0:60,1:61:99:0,147,2371	0/0:40,0:40:96.33:0,96,1614	0/0:66,0:54:99:0,147,2352	0/0:29,0:25:57.19:0,57,946	0/0:15,0:14:42.13:0,42,670
chr10	83872785	.	CCA	C	826.72	PASS	AB=0.743;AC=5;AF=0.089;AN=56;BaseQRankSum=7.382;DP=1213;FS=0.531;HRun=0;HaplotypeScore=177.3946;InbreedingCoeff=0.6783;MQ=51.16;MQ0=53;MQRankSum=-3.268;QD=8.61;ReadPosRankSum=-0.137;VQSLOD=3.0742;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:41:96.26:0,96,1460	0/0:15,0:14:24.08:0,24,371	0/0:40,0:4:0.70:0,1,76	0/0:57,0:4:9.03:0,9,109	0/0:33,0:33:84.26:0,84,1295	0/0:23,0:23:55.95:0,56,867	1/1:24,17:38:59.60:686,60,0	0/0:80,1:71:99:0,100,1429	0/0:50,0:50:76.14:0,76,1906	0/0:71,1:63:95.18:0,95,1888	0/0:22,0:22:30.10:0,30,478	0/0:47,2:49:74.63:0,75,1691	0/0:45,0:44:99:0,105,1601	0/0:38,0:38:56.23:0,56,1349	0/0:45,0:43:75.22:0,75,1146	0/0:56,1:54:63.46:0,63,1981	0/0:38,0:38:84.09:0,84,1350	0/1:17,0:25:32.10:170,0,32	0/0:28,0:18:35.98:0,36,529	0/0:31,0:30:81.19:0,81,1261	0/0:117,0:109:99:0,250,3928	0/0:42,1:41:59.05:0,59,1374	0/0:23,0:22:14.60:0,15,709	0/0:68,0:68:99:0,171,2694	1/1:16,0:27:19.71:99,20,0	0/0:52,0:45:78.26:0,78,1217	0/0:26,0:24:50.20:0,50,773	0/0:16,0:16:27.09:0,27,414
chr10	83872816	.	CCA	C	7560	PASS	AB=0.685;AC=19;AF=0.339;AN=56;BaseQRankSum=9.886;DP=1298;FS=2.821;HRun=0;HaplotypeScore=166.3149;InbreedingCoeff=0.7379;MQ=48.46;MQ0=94;MQRankSum=2.926;QD=18.13;ReadPosRankSum=0.707;VQSLOD=5.0275;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,2:48:44.56:0,45,1676	1/1:6,13:15:17.71:227,18,0	0/0:37,0:3:3:0,3,25	0/0:62,0:6:11.02:0,11,93	0/0:41,0:39:90.29:0,90,1422	0/0:26,0:25:66.23:0,66,1084	1/1:19,25:39:54.35:743,54,0	0/0:125,1:92:78.95:0,79,1659	0/0:51,1:51:83.45:0,83,1872	1/1:45,27:58:86.55:1336,87,0	1/1:7,14:19:24.08:303,24,0	0/0:48,0:48:99:0,117,1873	0/0:38,1:37:8.60:0,9,1147	0/0:37,1:34:49.71:0,50,1262	1/1:10,35:41:54.01:681,54,0	1/1:25,31:51:99:1521,123,0	1/1:21,15:32:73.21:878,73,0	0/1:17,10:26:47.18:483,0,47	0/0:47,0:26:51.12:0,51,718	0/0:40,0:38:52.83:0,53,1350	0/0:124,0:108:99:0,238,3719	0/0:42,0:38:66.42:0,66,1581	0/0:25,0:22:51.14:0,51,811	0/0:55,0:55:99:0,132,2203	1/1:5,18:22:11.82:133,12,0	0/1:34,16:44:62.60:841,0,63	0/0:23,0:19:45.13:0,45,685	0/1:5,18:22:4.49:415,0,4
chr10	83873500	.	TG	T	1007.79	PASS	AB=0.949;AC=21;AF=0.375;AN=56;BaseQRankSum=2.218;DP=449;FS=3.114;HRun=12;HaplotypeScore=76.2059;InbreedingCoeff=0.5299;MQ=86.24;MQ0=1;MQRankSum=-1.378;QD=4.54;ReadPosRankSum=1.892;VQSLOD=1.7207;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,9:29:38.61:272,39,0	0/0:6,0:6:11.58:0,12,64	0/1:22,0:22:14.80:15,0,199	0/1:22,0:21:8.38:8,0,85	0/0:16,0:16:5.82:0,6,47	0/1:15,0:15:3.95:4,0,129	1/1:7,0:27:38.69:114,39,0	1/1:7,4:12:10.95:75,11,0	0/0:18,0:18:4.46:0,4,170	0/1:7,2:9:19.52:37,0,20	0/0:14,1:15:6.97:0,7,188	0/0:22,2:24:6.41:0,6,218	0/0:15,0:15:8.98:0,9,79	0/0:12,0:12:12:0,12,110	0/0:18,0:18:32.32:0,32,206	0/0:14,1:15:6.12:0,6,141	0/0:28,2:30:12.83:0,13,327	1/1:2,1:11:19.28:70,19,0	1/1:7,3:13:17.96:104,18,0	1/1:6,5:12:16.96:122,17,0	1/1:19,8:27:28.88:213,29,0	0/0:9,0:9:10.56:0,11,88	0/0:8,1:9:8.77:0,9,91	0/0:16,2:18:9.71:0,10,231	0/0:13,0:13:8.90:0,9,69	0/1:12,1:13:8.54:9,0,71	1/1:5,5:10:20.90:160,21,0	0/0:9,0:9:17.74:0,18,125
chr10	83876394	.	TTTTGTTTG	T	4573.73	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=8.130;DP=738;FS=0.000;HRun=0;HaplotypeScore=187.2649;InbreedingCoeff=0.9268;MQ=59.71;MQ0=9;MQRankSum=-10.160;QD=21.08;ReadPosRankSum=-0.291;VQSLOD=4.0517;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,16:28:32.51:694,33,0	1/1:7,4:11:9.03:226,9,0	0/0:37,0:16:6.02:0,6,95	0/0:46,0:27:6.02:0,6,102	0/0:15,0:35:69.24:0,69,2013	0/0:11,0:19:18.06:0,18,547	1/1:14,0:19:15.05:279,15,0	0/0:30,0:29:30.09:0,30,984	0/0:34,0:34:60.20:0,60,2370	1/1:31,11:41:36.11:835,36,0	1/1:7,13:20:33.07:710,33,0	0/0:23,0:23:36.10:0,36,1304	0/0:21,0:21:51.18:0,51,2042	0/0:17,0:17:36.12:0,36,1414	1/1:12,14:26:30.10:702,30,0	1/1:12,8:20:17.84:451,18,0	1/1:16,12:28:24:515,24,0	1/1:15,7:22:8.70:162,9,0	0/0:24,0:24:27.98:0,28,1017	0/0:28,0:28:54.19:0,54,2121	0/0:27,0:27:57.16:0,57,2132	0/0:25,0:25:48.13:0,48,1851	0/0:21,0:21:42.62:0,43,1488	0/0:33,0:33:78.27:0,78,2986	0/0:8,0:28:44.89:0,45,366	0/0:15,0:29:50.92:0,51,454	0/0:37,0:37:78.27:0,78,3145	0/0:4,0:7:5.99:0,6,49
chr10	83876691	.	C	CGGATGGAT	7608.28	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-9.024;DP=682;FS=3.549;HRun=0;HaplotypeScore=158.1885;InbreedingCoeff=0.9683;MQ=72.23;MQ0=0;MQRankSum=-6.622;QD=44.23;ReadPosRankSum=-0.284;VQSLOD=4.7819;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,138,2947	1/1:0,12:15:24.08:960,24,0	0/0:36,0:35:74.68:0,75,1366	0/0:41,0:36:80.26:0,80,1692	0/0:19,0:19:42.12:0,42,1009	0/0:20,0:20:54.01:0,54,1169	0/0:26,0:26:68.87:0,69,1079	0/0:31,0:31:77.96:0,78,1536	0/0:26,0:26:59.95:0,60,1229	1/1:3,13:22:48.04:920,48,0	1/1:0,10:12:6.64:167,7,0	0/0:25,0:25:68.93:0,69,1429	0/0:21,0:21:59.87:0,60,1265	0/0:18,0:18:51.08:0,51,1197	1/1:2,21:27:21.07:906,21,0	1/1:4,18:23:21.07:882,21,0	1/1:4,15:23:18.06:716,18,0	0/0:17,0:17:45.11:0,45,1067	0/0:19,0:19:41.93:0,42,737	0/0:27,0:27:68.78:0,69,1300	0/0:37,0:38:96.05:0,96,2043	0/0:20,0:20:52.15:0,52,970	0/0:21,0:21:45.12:0,45,1037	0/0:31,0:31:75.12:0,75,1746	1/1:0,14:15:12.04:473,12,0	1/1:1,23:27:69.17:2197,69,0	0/0:19,0:19:51.04:0,51,1023	1/1:0,4:8:9.03:388,9,0
chr10	83877840	.	T	TG	5402.88	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=-9.250;DP=602;FS=7.408;HRun=6;HaplotypeScore=59.5318;InbreedingCoeff=0.8750;MQ=67.63;MQ0=0;MQRankSum=-1.222;QD=26.36;ReadPosRankSum=2.242;VQSLOD=5.1051;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:32:45.37:876,45,0	1/1:2,7:9:21.07:262,21,0	0/1:8,0:8:20.66:21,0,72	0/1:6,0:6:0.04:0,0,58	0/0:19,0:19:54.12:0,54,550	0/0:15,0:15:45.10:0,45,459	0/0:34,0:34:90.20:0,90,916	0/0:20,0:20:36.06:0,36,362	0/0:25,0:25:60.10:0,60,603	1/1:1,24:25:75.23:925,75,0	1/1:2,16:18:38.71:463,39,0	0/0:27,0:27:78.16:0,78,789	0/0:12,0:12:30.06:0,30,306	0/0:23,0:23:63.12:0,63,636	1/1:2,26:28:72.23:906,72,0	1/1:2,23:25:66.21:826,66,0	1/1:3,25:28:63.20:792,63,0	1/1:26,0:26:41.78:332,42,0	0/0:19,0:19:48.09:0,48,483	0/0:14,0:14:39.07:0,39,389	0/0:36,0:36:90.16:0,90,907	0/0:32,0:32:87.18:0,87,875	0/0:20,0:20:57.12:0,57,575	0/0:14,0:14:42.08:0,42,421	0/0:22,0:22:63.14:0,63,642	0/0:30,0:30:78.17:0,78,796	0/0:20,0:20:60.14:0,60,612	0/0:15,0:15:39.09:0,39,397
chr10	83877846	.	G	GT	2084.86	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=12.298;DP=600;FS=6.599;HRun=2;HaplotypeScore=69.5526;InbreedingCoeff=0.7960;MQ=67.61;MQ0=0;MQRankSum=-1.672;QD=10.92;ReadPosRankSum=4.905;VQSLOD=1.8071;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:12.26:238,0,12	1/1:9,0:9:18.61:91,19,0	0/0:8,0:9:8.49:0,8,136	0/0:6,0:6:11.96:0,12,104	0/0:18,0:18:54.17:0,54,667	0/0:16,0:16:48.14:0,48,582	0/0:31,0:31:93.26:0,93,1124	0/0:22,0:22:57.07:0,57,608	0/0:23,0:23:63.17:0,63,753	1/1:27,0:27:22.42:224,22,0	1/1:18,0:18:17.46:133,17,0	0/0:26,0:26:75.24:0,75,927	0/0:14,0:14:39.04:0,39,426	0/0:26,0:26:71.99:0,72,842	1/1:28,0:28:24.53:242,25,0	1/1:23,0:23:61.18:301,61,0	0/1:28,0:28:22.51:200,0,23	1/1:1,25:26:60.20:847,60,0	0/0:19,0:19:54.06:0,54,625	0/0:14,0:14:39.11:0,39,469	0/0:35,0:35:99:0,99,1164	0/0:30,0:30:80.97:0,81,1000	0/0:19,0:19:57.18:0,57,702	0/0:16,0:16:45.11:0,45,529	0/0:23,0:23:66.17:0,66,789	0/0:28,0:28:84.24:0,84,1016	0/0:20,0:20:60.19:0,60,740	0/0:14,0:14:42.12:0,42,505
chr10	83878391	.	GGAA	G	1813.75	PASS	AB=0.940;AC=10;AF=0.179;AN=56;BaseQRankSum=0.985;DP=721;FS=4.355;HRun=0;HaplotypeScore=142.4795;InbreedingCoeff=0.0111;MQ=67.39;MQ0=5;MQRankSum=0.114;QD=7.92;ReadPosRankSum=-6.163;VQSLOD=0.9896;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:99:281,0,207	0/0:5,0:5:11.45:0,11,61	0/0:30,0:20:19.48:0,19,554	0/0:38,0:24:54.72:0,55,645	0/0:22,0:22:57.11:0,57,1010	0/0:23,0:22:63.18:0,63,1238	0/1:27,0:27:37.09:37,0,269	0/0:30,0:30:75.18:0,75,1235	0/0:32,0:32:96.24:0,96,1823	0/1:19,8:27:99:180,0,146	0/1:6,3:9:1.76:2,0,37	0/0:42,0:42:99:0,117,2300	0/0:34,0:34:96.21:0,96,1712	0/0:26,0:26:75.22:0,75,1481	0/1:28,0:28:99:183,0,146	0/1:25,0:25:99:164,0,158	0/1:31,0:31:99:180,0,193	0/1:26,0:26:99:113,0,135	0/0:16,0:16:42.12:0,42,734	0/0:15,0:15:45.07:0,45,731	0/0:73,0:73:99:0,184,3854	0/0:20,0:20:57.14:0,57,1040	0/0:9,0:9:27.08:0,27,552	0/0:31,0:31:77.91:0,78,1341	1/1:10,12:21:57.14:820,57,0	0/0:23,0:23:7.28:0,7,554	0/0:13,0:13:38.98:0,39,560	0/0:9,0:9:0.09:0,0,232
chr10	83878396	.	A	AGG	4289.79	PASS	AB=0.699;AC=12;AF=0.214;AN=56;BaseQRankSum=12.692;DP=715;FS=0.000;HRun=1;HaplotypeScore=122.3237;InbreedingCoeff=0.2428;MQ=65.82;MQ0=5;MQRankSum=-0.247;QD=20.72;ReadPosRankSum=1.999;VQSLOD=2.7555;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,21:34:0.29:875,0,0	1/1:1,4:5:12.04:158,12,0	0/0:30,0:19:27.69:0,28,611	0/0:38,0:24:23.09:0,23,675	0/0:20,0:20:60.17:0,60,906	0/0:22,0:21:63.13:0,63,994	0/1:20,6:26:99:193,0,216	0/0:29,0:29:81.07:0,81,1195	0/0:33,0:33:99:0,99,1566	0/1:16,8:24:99:364,0,111	1/1:5,3:8:14.08:172,14,0	0/0:40,0:40:99:0,120,1905	0/0:32,0:32:96.30:0,96,1511	0/0:25,0:25:75.25:0,75,1200	0/1:16,13:29:71.37:597,0,71	0/1:13,12:25:45.72:558,0,46	0/1:17,15:32:31.64:723,0,32	0/1:7,17:24:15.05:650,0,15	0/0:17,0:17:48.13:0,48,691	0/0:17,0:17:51.13:0,51,739	0/0:74,0:74:99:0,216,3345	0/0:19,0:19:57.19:0,57,929	0/0:10,0:10:30.09:0,30,465	0/0:30,0:30:84.25:0,84,1287	0/0:20,0:19:0.35:0,0,165	0/0:24,1:25:21.10:0,21,289	0/0:15,0:15:45.13:0,45,683	0/0:11,0:11:8.40:0,8,158
chr10	83878397	.	A	AG	2062.22	PASS	AB=0.722;AC=12;AF=0.214;AN=56;BaseQRankSum=14.741;DP=706;FS=0.751;HRun=1;HaplotypeScore=114.0585;InbreedingCoeff=0.1702;MQ=65.92;MQ0=5;MQRankSum=0.289;QD=8.89;ReadPosRankSum=4.693;VQSLOD=1.3407;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,21:35:21.26:436,0,21	1/1:1,4:5:11.92:94,12,0	0/0:30,1:19:13.99:0,14,523	0/0:39,0:25:59.35:0,59,648	0/0:19,0:19:54.18:0,54,700	0/0:23,0:22:56.84:0,57,773	0/1:21,0:27:81.73:82,0,143	0/0:26,0:26:75.24:0,75,961	0/0:32,0:32:96.31:0,96,1245	0/1:16,8:24:86.29:213,0,86	1/1:5,3:8:9.57:98,10,0	0/0:39,0:39:99:0,117,1519	0/0:32,0:32:93.29:0,93,1192	0/0:25,0:25:75.24:0,75,973	0/1:14,13:27:54.48:298,0,54	0/1:13,12:25:75.26:254,0,75	0/1:16,15:31:63.67:369,0,64	0/1:8,17:25:4.32:364,0,4	0/0:17,0:17:48.14:0,48,597	0/0:17,0:17:48.16:0,48,622	0/0:72,1:73:99:0,200,2716	0/0:19,0:19:57.19:0,57,739	0/0:10,0:10:30.10:0,30,389	0/0:28,0:28:78.25:0,78,1011	0/0:19,0:18:44.86:0,45,185	0/1:24,1:25:12.72:13,0,184	0/0:14,0:14:42.14:0,42,544	0/0:11,0:11:22.44:0,22,118
chr10	83878453	.	GT	G	408.34	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.340;DP=684;FS=3.859;HRun=1;HaplotypeScore=89.1781;InbreedingCoeff=0.9900;MQ=77.37;MQ0=0;MQRankSum=-1.696;QD=27.22;ReadPosRankSum=-1.032;VQSLOD=3.2152;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1722	0/0:8,0:8:21.07:0,21,336	0/0:21,0:20:24.92:0,25,726	0/0:23,0:22:56.83:0,57,791	0/0:14,0:14:42.14:0,42,656	0/0:12,0:12:36.12:0,36,576	0/0:30,0:30:90.26:0,90,1410	0/0:30,0:30:90.30:0,90,1410	0/0:36,0:36:99:0,108,1684	0/0:22,0:22:63.21:0,63,1007	0/0:8,0:8:21.07:0,21,336	0/0:34,0:34:99:0,102,1607	0/0:36,0:36:99:0,105,1657	0/0:21,0:21:63.21:0,63,1007	0/0:32,0:32:96.33:0,96,1533	0/0:18,0:18:54.17:0,54,833	0/0:34,0:34:99:0,102,1598	0/0:26,0:26:75.22:0,75,1165	0/0:23,0:23:66.22:0,66,1045	0/0:19,0:19:57.18:0,57,888	0/0:66,0:66:99:0,199,3156	0/0:19,0:19:57.19:0,57,904	0/0:13,0:13:39.13:0,39,623	0/0:27,0:27:81.26:0,81,1265	1/1:0,15:15:36.12:503,36,0	0/0:26,0:26:78.26:0,78,1218	0/0:18,0:18:54.18:0,54,862	0/0:17,0:17:51.17:0,51,815
chr10	83878592	.	G	GC	7290.93	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-15.438;DP=617;FS=2.394;HRun=2;HaplotypeScore=56.0970;InbreedingCoeff=0.9959;MQ=80.15;MQ0=0;MQRankSum=-5.898;QD=39.62;ReadPosRankSum=2.300;VQSLOD=5.4195;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,49:52:99:1987,138,0	1/1:0,10:10:27.09:389,27,0	0/0:17,0:17:48.15:0,48,591	0/0:18,0:18:45.11:0,45,525	0/0:22,0:22:57.18:0,57,706	0/0:14,0:14:42.10:0,42,495	0/0:39,0:39:99:0,111,1374	0/0:25,0:25:69.21:0,69,844	0/0:17,0:17:45.14:0,45,558	1/1:0,22:22:66.22:947,66,0	1/1:0,6:6:18.06:257,18,0	0/0:28,0:28:81.25:0,81,1002	0/0:26,0:26:78.25:0,78,966	0/0:14,0:14:42.13:0,42,521	1/1:0,19:19:54.18:778,54,0	1/1:0,13:13:27.09:389,27,0	1/1:0,30:30:81.27:1166,81,0	0/0:31,0:31:90.28:0,90,1116	0/0:14,0:14:36.11:0,36,444	0/0:16,0:16:48.15:0,48,595	0/0:56,0:56:99:0,159,1954	0/0:14,0:14:39.12:0,39,483	0/0:14,0:14:36.11:0,36,446	0/0:37,0:37:99:0,105,1301	0/0:15,0:15:45.12:0,45,544	1/1:0,27:27:81.27:1161,81,0	0/0:16,0:16:45.14:0,45,558	1/1:0,5:5:15.05:216,15,0
chr10	83879105	.	CGA	C	244.39	PASS	AB=0.992;AC=6;AF=0.107;AN=56;BaseQRankSum=9.962;DP=556;FS=0.507;HRun=0;HaplotypeScore=100.4092;InbreedingCoeff=0.2705;MQ=57.82;MQ0=18;MQRankSum=1.582;QD=2.49;ReadPosRankSum=4.905;VQSLOD=1.6963;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:99:0,99,850	0/0:9,0:9:2.83:0,3,36	0/1:13,0:4:4.49:4,0,61	0/0:9,0:4:0.47:0,0,2	0/0:27,0:27:49.47:0,49,622	0/0:20,0:20:60.07:0,60,888	1/1:5,13:17:38.87:306,39,0	0/0:18,1:18:11.70:0,12,630	0/0:16,0:16:37.10:0,37,445	0/0:28,0:27:10.63:0,11,223	0/1:11,0:10:8.25:8,0,36	0/0:16,0:17:36.77:0,37,550	0/0:22,0:22:60:0,60,734	0/0:14,0:14:32.99:0,33,386	0/0:17,0:17:30.68:0,31,133	0/1:26,0:26:16.10:16,0,132	0/1:29,1:30:31.60:32,0,137	0/0:18,0:17:33.74:0,34,162	0/0:26,0:27:55.49:0,55,695	0/0:12,0:12:32.86:0,33,378	0/0:36,0:35:76.13:0,76,1005	0/0:16,0:17:45.79:0,46,495	0/0:19,0:19:48.84:0,49,450	0/0:23,0:23:66.34:0,66,1018	0/0:18,0:18:27.66:0,28,220	0/0:19,0:18:23.05:0,23,172	0/0:14,0:14:34.98:0,35,476	0/0:8,0:8:12.69:0,13,55
chr10	83879106	.	GAA	G	1871.97	PASS	AB=0.843;AC=23;AF=0.411;AN=56;BaseQRankSum=12.385;DP=566;FS=1.324;HRun=16;HaplotypeScore=97.0509;InbreedingCoeff=0.7529;MQ=57.75;MQ0=18;MQRankSum=-0.055;QD=7.61;ReadPosRankSum=7.072;VQSLOD=0.7950;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:46:35.55:0,36,313	1/1:3,5:9:11.69:87,12,0	0/1:16,0:4:10.10:10,0,62	0/0:9,0:4:0.47:0,0,2	0/0:26,1:28:21.13:0,21,516	0/0:17,0:21:51.12:0,51,614	1/1:16,0:15:35.09:295,35,0	0/0:15,0:19:28.09:0,28,446	0/0:12,0:14:6.69:0,7,278	1/1:11,14:27:44.01:336,44,0	1/1:5,5:10:12.89:109,13,0	0/0:16,1:18:18.75:0,19,383	0/0:16,0:21:47.93:0,48,490	0/0:12,0:14:32.38:0,32,346	1/1:5,0:17:31.94:134,32,0	1/1:8,14:26:49.76:373,50,0	1/1:10,17:30:52.71:397,53,0	1/1:5,0:17:27:113,27,0	0/1:27,1:30:8.70:9,0,390	0/0:10,0:12:27.02:0,27,313	0/0:27,0:35:52.38:0,52,600	0/0:15,0:18:43.19:0,43,452	0/0:16,0:19:26.44:0,26,256	0/0:22,0:25:61.43:0,61,765	0/1:7,1:18:8.35:8,0,58	1/1:5,1:18:33.92:153,34,0	0/0:14,0:16:34.78:0,35,360	1/1:1,0:8:13.69:58,14,0
chr10	83882643	.	AACCC	A	1558.94	PASS	AB=0.996;AC=15;AF=0.268;AN=56;BaseQRankSum=12.868;DP=561;FS=6.205;HRun=0;HaplotypeScore=147.5643;InbreedingCoeff=0.1218;MQ=69.79;MQ0=1;MQRankSum=-11.869;QD=5.71;ReadPosRankSum=9.089;VQSLOD=0.1944;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:41,4:45:59.27:773,59,0	1/1:6,0:6:8.19:24,8,0	0/0:24,0:21:51.06:0,51,705	0/0:14,0:14:15.64:0,16,458	0/0:16,0:16:42.07:0,42,644	0/0:16,0:16:42.10:0,42,636	0/1:32,0:32:77.39:77,0,113	0/0:22,0:22:61:0,61,561	0/0:18,0:18:44.17:0,44,732	0/1:26,0:27:88.77:130,0,89	1/1:14,0:15:2.36:92,2,0	0/0:18,0:18:36.04:0,36,505	0/0:17,0:17:39.06:0,39,570	0/0:12,0:12:30.03:0,30,348	0/1:25,0:25:34.91:75,0,35	0/1:23,0:23:18.69:58,0,19	0/1:26,0:26:29.55:30,0,88	0/1:16,0:16:10.27:10,0,34	0/0:19,0:20:52.83:0,53,450	0/0:12,0:13:34.52:0,35,335	0/0:32,0:33:80.81:0,81,723	0/0:18,0:18:47.95:0,48,550	0/0:14,0:14:35.48:0,35,497	0/0:14,0:14:36.08:0,36,547	0/1:26,0:26:33.20:33,0,108	0/1:24,0:24:59.75:313,0,60	0/0:18,0:18:41.99:0,42,386	0/1:8,0:8:21.06:109,0,21
chr10	83882644	.	ACCCCC	A	7757.40	PASS	AB=0.558;AC=23;AF=0.411;AN=56;BaseQRankSum=1.847;DP=555;FS=1.222;HRun=12;HaplotypeScore=138.9000;InbreedingCoeff=0.9196;MQ=73.07;MQ0=1;MQRankSum=-9.870;QD=28.84;ReadPosRankSum=6.722;VQSLOD=2.3953;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:45:82.30:298,82,0	1/1:0,6:6:15.05:264,15,0	0/0:26,0:25:50.06:0,50,926	0/0:15,0:15:35.44:0,35,616	0/0:8,0:15:39.11:0,39,629	0/0:5,0:15:36.12:0,36,636	1/1:8,24:32:66.16:1160,66,0	0/0:6,0:22:47.80:0,48,508	0/0:5,0:18:41.81:0,42,723	1/1:6,20:26:63.20:1110,63,0	1/1:2,13:15:42.12:724,42,0	0/0:6,0:17:24.08:0,24,427	0/0:4,0:17:30.10:0,30,517	0/0:7,0:11:12.04:0,12,203	1/1:2,22:24:60.19:1058,60,0	1/1:2,21:23:45.14:793,45,0	1/1:5,20:25:45.13:792,45,0	1/1:2,13:15:24.06:423,24,0	0/0:9,0:20:38.77:0,39,413	0/0:5,0:12:32.75:0,33,373	0/0:11,0:32:54.14:0,54,570	0/0:7,0:17:27.09:0,27,427	0/0:8,0:14:23.49:0,23,401	0/0:6,0:15:30.10:0,30,556	1/1:6,20:26:51.09:866,51,0	0/1:5,2:24:12.84:213,0,13	0/0:5,0:17:27.05:0,27,282	1/1:2,0:8:14.96:55,15,0
chr10	83883008	.	T	TAGA	11146.29	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-14.099;DP=657;FS=4.392;HRun=0;HaplotypeScore=88.5352;InbreedingCoeff=0.9993;MQ=78.36;MQ0=0;MQRankSum=-2.918;QD=52.09;ReadPosRankSum=2.624;VQSLOD=7.3940;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,157,2530	1/1:2,10:12:23.97:504,24,0	0/0:12,0:12:30.07:0,30,450	0/0:19,0:19:47.31:0,47,658	0/0:19,0:19:54.17:0,54,858	0/0:24,0:24:72.25:0,72,1176	1/1:2,14:16:36.12:803,36,0	0/0:21,0:21:57.19:0,57,929	0/0:23,0:23:66.23:0,66,1078	1/1:2,19:22:60.21:1286,60,0	1/1:1,16:18:45.11:957,45,0	0/0:27,0:27:81.26:0,81,1293	0/0:25,0:25:75.26:0,75,1223	0/0:17,0:17:48.16:0,48,779	1/1:2,20:22:54.19:1206,54,0	1/1:3,26:29:26.25:1558,26,0	1/1:2,38:41:99:2232,102,0	1/1:2,25:28:63.22:1395,63,0	0/0:34,0:34:96.30:0,96,1508	0/0:19,0:19:57.17:0,57,883	0/0:28,0:28:75.26:0,75,1217	0/0:14,0:14:39.13:0,39,635	0/0:12,0:12:36.11:0,36,563	0/0:27,0:27:78.24:0,78,1226	1/1:4,20:26:54.19:1205,54,0	0/0:22,0:22:63.22:0,63,1028	0/0:32,0:32:87.27:0,87,1366	0/0:15,0:15:41.85:0,42,686
chr10	83884000	.	GGGGCT	G	1429.15	PASS	AC=22;AF=0.407;AN=54;BaseQRankSum=8.057;DP=347;FS=7.717;HRun=0;HaplotypeScore=71.8207;InbreedingCoeff=0.8708;MQ=70.80;MQ0=7;MQRankSum=-8.772;QD=12.99;ReadPosRankSum=-3.260;VQSLOD=0.7701;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,8:13:9.03:132,9,0	1/1:1,8:9:12:196,12,0	0/0:14,0:11:9.84:0,10,553	0/0:17,0:16:29.75:0,30,483	0/0:10,0:10:20.67:0,21,607	0/0:13,0:13:33.11:0,33,916	1/1:11,0:11:12.54:66,13,0	0/0:14,0:14:36.12:0,36,708	0/0:12,0:12:33.11:0,33,899	1/1:3,5:8:12:196,12,0	1/1:4,1:5:3:25,3,0	0/0:7,0:7:18.53:0,19,480	0/0:12,0:12:33.11:0,33,937	0/0:18,0:18:54.16:0,54,1445	1/1:14,0:14:3.86:40,4,0	1/1:3,12:15:30.10:565,30,0	1/1:4,11:14:12.04:216,12,0	1/1:6,0:4:5.91:32,6,0	0/0:16,0:16:42.11:0,42,967	0/0:9,0:7:15.03:0,15,330	0/0:32,0:32:75.25:0,75,1931	0/0:6,0:6:18.06:0,18,485	0/0:13,0:12:30.09:0,30,746	0/0:24,0:23:60.16:0,60,1664	1/1:4,0:4:6.02:71,6,0	1/1:7,1:8:9.01:93,9,0	0/0:17,0:16:51.13:0,51,1336	./.
chr10	83884002	.	GGCT	G	1305.50	PASS	AB=1.000;AC=23;AF=0.426;AN=54;BaseQRankSum=8.540;DP=337;FS=11.659;HRun=0;HaplotypeScore=59.7256;InbreedingCoeff=0.8369;MQ=69.64;MQ0=8;MQRankSum=-8.488;QD=11.16;ReadPosRankSum=-3.190;VQSLOD=1.2414;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:13:9.02:104,9,0	1/1:9,0:9:11.98:109,12,0	0/1:13,0:10:12.36:12,0,392	0/0:16,0:15:24.11:0,24,353	0/0:11,0:11:20.67:0,21,432	0/0:12,0:12:33.10:0,33,643	1/1:0,7:7:15.05:232,15,0	0/0:13,0:13:36.12:0,36,572	0/0:12,0:12:33.11:0,33,654	1/1:7,0:7:11.98:110,12,0	1/1:5,0:5:3:25,3,0	0/0:7,0:7:17.87:0,18,341	0/0:12,0:12:33.11:0,33,666	0/0:18,0:18:54.16:0,54,1041	1/1:12,1:13:7.26:78,7,0	1/1:15,0:15:29.86:305,30,0	1/1:16,0:14:12.02:117,12,0	1/1:5,1:4:12.04:164,12,0	0/0:15,0:15:42.10:0,42,719	0/0:9,0:7:15.03:0,15,258	0/0:31,0:31:75.23:0,75,1369	0/0:6,0:6:18.06:0,18,355	0/0:13,0:12:30.08:0,30,547	0/0:23,0:22:60.10:0,60,1189	1/1:4,0:4:6.02:71,6,0	1/1:6,1:7:15.04:185,15,0	0/0:19,0:18:54.13:0,54,980	./.
chr10	83884003	.	GCT	G	1042.67	PASS	AB=0.929;AC=23;AF=0.426;AN=54;BaseQRankSum=8.754;DP=333;FS=11.726;HRun=0;HaplotypeScore=55.2944;InbreedingCoeff=0.8347;MQ=69.82;MQ0=10;MQRankSum=-9.018;QD=9.48;ReadPosRankSum=-3.275;VQSLOD=0.9751;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,1:11:9.01:86,9,0	1/1:8,1:9:11.95:91,12,0	0/1:11,1:10:12.96:13,0,313	0/0:15,0:15:24.56:0,25,309	0/0:11,0:11:21.04:0,21,356	0/0:12,0:12:33.11:0,33,542	1/1:7,0:7:15.03:159,15,0	0/0:13,0:13:36.12:0,36,523	0/0:12,0:12:33.11:0,33,549	1/1:5,1:6:11.95:93,12,0	1/1:3,1:4:3:25,3,0	0/0:7,0:7:17.15:0,17,286	0/0:13,0:13:33.10:0,33,557	0/0:18,0:18:54.16:0,54,859	1/1:1,10:11:6.90:77,7,0	1/1:12,3:15:29.95:253,30,0	1/1:13,1:12:11.97:94,12,0	1/1:5,2:4:12.03:140,12,0	0/0:15,0:15:41.85:0,42,627	0/0:9,0:7:15.03:0,15,226	0/0:31,0:31:75.24:0,75,1193	0/0:6,0:6:18.06:0,18,301	0/0:15,0:12:30.08:0,30,470	0/0:23,0:22:60.11:0,60,990	1/1:0,4:4:6.02:71,6,0	1/1:4,3:7:14.25:147,14,0	0/0:19,0:18:54.14:0,54,835	./.
chr10	83884085	.	AAG	A	723.79	PASS	AB=0.977;AC=23;AF=0.411;AN=56;BaseQRankSum=7.760;DP=389;FS=19.868;HRun=0;HaplotypeScore=67.4228;InbreedingCoeff=0.2950;MQ=37.57;MQ0=25;MQRankSum=-2.936;QD=3.71;ReadPosRankSum=-1.078;VQSLOD=0.4781;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:21:17.92:121,18,0	1/1:3,0:1:0.89:2,1,0	1/1:7,0:3:5.72:37,6,0	0/1:14,0:4:10.25:10,0,22	0/0:12,0:12:27.05:0,27,327	0/0:19,0:18:44.23:0,44,592	1/1:13,0:11:4.13:95,4,0	0/0:20,0:20:47.16:0,47,589	0/0:10,0:10:14.97:0,15,188	0/1:14,0:12:24.19:73,0,24	0/1:6,0:6:8.22:8,0,11	0/0:10,0:9:17.11:0,17,276	0/1:11,0:11:4.05:4,0,217	0/0:16,0:16:14.41:0,14,302	1/1:7,0:7:11.43:69,11,0	0/1:10,1:11:13.49:100,0,13	0/1:20,0:16:41.61:50,0,42	0/1:15,0:9:11.85:12,0,51	0/0:21,0:19:22.33:0,22,504	0/0:11,0:10:20.49:0,20,210	0/0:17,0:17:37.26:0,37,436	0/0:8,0:7:6.68:0,7,207	0/1:14,0:12:0.30:0,0,227	0/0:27,0:24:9.02:0,9,577	1/1:11,0:11:0.62:63,1,0	1/1:10,1:10:18.53:115,19,0	0/0:23,0:22:11.73:0,12,484	0/1:12,2:10:1.36:135,0,1
chr10	83884181	.	A	AGC	444.53	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.669;DP=378;FS=9.824;HRun=0;HaplotypeScore=61.0379;InbreedingCoeff=0.8016;MQ=71.59;MQ0=0;MQRankSum=0.603;QD=26.15;ReadPosRankSum=2.454;VQSLOD=4.1517;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:45.12:0,45,608	0/0:5,0:5:15:0,15,187	0/0:9,0:9:24.03:0,24,289	0/0:18,0:17:38.87:0,39,452	0/0:14,0:14:39.10:0,39,525	1/1:0,16:17:30.10:539,30,0	0/0:15,0:15:38.98:0,39,479	0/0:25,0:25:66.11:0,66,803	0/0:10,0:10:27.02:0,27,306	0/0:12,0:12:36.08:0,36,481	0/0:12,0:12:33.07:0,33,409	0/0:4,0:4:12:0,12,132	0/0:13,0:13:39.13:0,39,544	0/0:17,0:17:45.14:0,45,611	0/0:11,0:11:27.08:0,27,360	0/0:9,0:9:21.07:0,21,293	0/0:27,0:26:69.15:0,69,922	0/0:13,0:13:30.10:0,30,419	0/0:20,0:20:57.16:0,57,747	0/0:15,0:15:45.11:0,45,579	0/0:20,0:20:48.11:0,48,633	0/0:2,0:2:3.01:0,3,42	0/0:10,0:10:24.07:0,24,319	0/0:13,0:13:30.08:0,30,402	0/0:15,0:15:42.13:0,42,570	0/0:10,0:10:27.06:0,27,357	0/0:17,0:17:51.16:0,51,694	0/0:6,0:6:17.24:0,17,182
chr10	83884409	.	G	GAAA	1466.72	PASS	AB=0.634;AC=11;AF=0.196;AN=56;BaseQRankSum=1.610;DP=491;FS=3.032;HRun=12;HaplotypeScore=89.3005;InbreedingCoeff=0.5204;MQ=57.76;MQ0=12;MQRankSum=0.764;QD=12.43;ReadPosRankSum=-2.276;VQSLOD=1.1374;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:41:40.73:0,41,814	1/1:3,4:7:12:185,12,0	1/1:3,0:2:0.47:1,0,0	0/0:7,0:7:8.04:0,8,60	0/0:15,0:18:20.57:0,21,276	0/0:16,0:18:35.63:0,36,356	0/1:8,0:21:20.52:26,0,21	0/0:23,0:23:46.49:0,46,533	0/0:12,0:13:26.36:0,26,286	1/1:7,6:14:9.32:369,9,0	0/1:7,8:16:21.60:153,0,22	0/0:15,0:17:34.52:0,35,401	0/0:13,0:13:22.06:0,22,257	0/0:16,0:15:36.02:0,36,394	0/0:18,0:18:41.93:0,42,461	0/1:7,7:13:55.21:97,0,55	1/1:14,22:39:47.05:786,47,0	0/0:14,0:16:44.94:0,45,473	0/0:11,0:9:17.97:0,18,193	0/0:17,0:17:17.58:0,18,230	0/0:16,0:22:41.60:0,42,406	0/0:8,0:7:11.11:0,11,133	0/0:10,0:11:11.80:0,12,134	0/0:26,0:27:67.65:0,68,771	0/0:16,0:16:29.82:0,30,311	0/0:23,0:21:4.18:0,4,259	0/0:23,0:26:46.28:0,46,494	0/0:6,0:7:14.98:0,15,152
chr10	83886447	.	CG	C	2522.65	PASS	AB=0.900;AC=33;AF=0.611;AN=54;BaseQRankSum=4.481;DP=269;FS=5.121;HRun=9;HaplotypeScore=36.5864;InbreedingCoeff=0.6811;MQ=69.58;MQ0=1;MQRankSum=1.199;QD=11.36;ReadPosRankSum=1.298;VQSLOD=1.7584;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:17:29.32:92,29,0	1/1:1,0:2:2.04:6,2,0	0/0:3,0:3:5.91:0,6,50	0/0:4,0:4:5.93:0,6,49	0/0:7,0:7:18.05:0,18,207	0/0:3,0:3:6.02:0,6,69	1/1:5,25:30:66.03:603,66,0	1/1:8,3:11:5.99:55,6,0	0/0:1,0:1:3.01:0,3,35	1/1:0,0:8:12.22:36,12,0	1/1:0,0:9:14.26:42,14,0	0/0:5,0:5:6.02:0,6,69	0/0:1,0:1:3.01:0,3,35	0/0:7,0:9:20.89:0,21,217	1/1:0,2:2:6:55,6,0	./.	1/1:1,0:32:57.04:168,57,0	1/1:1,20:21:51.03:466,51,0	1/1:2,13:15:36.01:325,36,0	1/1:1,0:1:3:27,3,0	1/1:1,29:30:72.04:658,72,0	0/0:9,0:9:15.04:0,15,172	0/0:4,0:4:6.02:0,6,69	0/1:16,2:18:6.79:7,0,407	1/1:0,0:9:16.08:48,16,0	1/1:1,0:9:14.26:42,14,0	1/1:0,2:2:6:55,6,0	1/1:1,0:5:8.15:24,8,0
chr10	83886775	.	TCTCCTC	T	2257.78	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.239;DP=562;FS=46.298;HRun=0;HaplotypeScore=122.6589;InbreedingCoeff=0.9794;MQ=87.49;MQ0=0;MQRankSum=-9.067;QD=56.44;ReadPosRankSum=-0.937;VQSLOD=1.4695;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,5122	0/0:6,0:6:18.05:0,18,573	0/0:20,0:20:60.21:0,60,1992	0/0:26,0:26:69.19:0,69,1999	0/0:20,0:20:60.21:0,60,2209	0/0:13,0:13:39.13:0,39,1468	1/1:0,35:35:81.28:2067,81,0	0/0:19,0:19:57.20:0,57,2120	0/0:22,0:22:66.21:0,66,2404	0/0:31,0:31:87.30:0,87,3128	0/0:18,0:18:54.19:0,54,1962	0/0:13,0:13:39.13:0,39,1451	0/0:14,0:14:42.14:0,42,1565	0/0:16,0:16:48.16:0,48,1788	0/0:21,0:21:63.22:0,63,2371	0/0:15,0:15:45.15:0,45,1640	0/0:27,0:27:81.28:0,81,2917	0/0:30,0:30:90.31:0,90,3373	0/0:20,0:20:60.21:0,60,2267	0/0:17,0:17:51.18:0,51,1919	0/0:25,0:25:75.26:0,75,2784	0/0:15,0:15:45.15:0,45,1693	0/0:20,0:20:60.21:0,60,2259	0/0:21,0:21:63.22:0,63,2368	1/1:0,5:5:12.04:307,12,0	0/0:17,0:17:51.18:0,51,1903	0/0:18,0:18:54.19:0,54,2032	0/0:11,0:11:30.10:0,30,1129
chr10	83886973	.	G	GGGGTGC	4308.65	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=3.067;DP=732;FS=4.694;HRun=0;HaplotypeScore=163.7383;InbreedingCoeff=0.9966;MQ=75.94;MQ0=8;MQRankSum=-8.252;QD=55.96;ReadPosRankSum=-2.666;VQSLOD=4.2108;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:69.18:0,69,1381	1/1:4,4:8:18.03:511,18,0	0/0:49,0:33:61.27:0,61,1074	0/0:73,0:43:47.90:0,48,1500	0/0:16,0:16:33.08:0,33,651	0/0:19,0:19:54.18:0,54,1181	0/0:29,0:29:78.20:0,78,1596	0/0:28,0:28:66.21:0,66,1339	0/0:24,0:24:63.22:0,63,1386	1/1:19,3:22:51.09:1271,51,0	1/1:6,3:9:21.06:476,21,0	0/0:34,0:34:90.31:0,90,1968	0/0:22,0:22:60.19:0,60,1258	0/0:31,0:31:87.20:0,87,1619	0/0:29,0:29:84.29:0,84,1810	1/1:10,5:15:30.10:934,30,0	1/1:19,4:23:54.01:1118,54,0	0/0:20,0:20:45.14:0,45,941	0/0:29,0:29:72.24:0,72,1509	0/0:11,0:11:33.11:0,33,705	0/0:58,0:58:99:0,156,3347	0/0:14,0:13:30.09:0,30,632	0/0:10,0:10:27.09:0,27,592	0/0:31,0:31:69.20:0,69,1448	0/0:19,0:19:45.14:0,45,912	0/0:30,0:29:76.12:0,76,1511	0/0:29,0:29:84.27:0,84,1783	0/0:19,0:19:51.17:0,51,1096
chr10	83887007	.	T	TG	3073.72	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=2.718;DP=1025;FS=4.579;HRun=1;HaplotypeScore=119.2937;InbreedingCoeff=0.8987;MQ=51.88;MQ0=92;MQRankSum=-3.632;QD=14.50;ReadPosRankSum=0.309;VQSLOD=3.2628;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:27:69.22:0,69,893	1/1:4,11:13:30.10:449,30,0	0/1:95,0:9:8.16:8,0,195	0/0:110,0:21:21.65:0,22,386	0/0:19,0:16:48.16:0,48,620	0/0:28,0:23:60.35:0,60,821	0/0:33,0:31:78.20:0,78,960	0/0:43,0:38:73.47:0,73,1096	0/0:33,0:30:76.66:0,77,955	1/1:14,28:35:50.58:1138,51,0	1/1:6,9:14:19.62:274,20,0	0/0:46,0:42:99:0,120,1486	0/0:26,0:24:62.89:0,63,750	0/0:29,0:27:75.24:0,75,969	0/0:32,1:28:66.01:0,66,852	1/1:5,12:15:33.11:489,33,0	1/1:5,23:27:63.14:894,63,0	0/0:31,0:29:59.32:0,59,897	0/0:54,0:41:99:0,108,1307	0/0:19,0:18:41.87:0,42,541	0/0:79,0:76:99:0,198,2454	0/0:23,0:19:41.08:0,41,515	0/0:26,0:26:50.83:0,51,632	0/0:44,0:41:99:0,102,1253	0/0:20,0:18:36.20:0,36,440	0/0:41,0:32:83.42:0,83,1011	0/0:29,0:25:72.22:0,72,910	0/0:15,0:15:45.15:0,45,579
chr10	83887131	.	TTGTGTTGTGTTG	T	5867.30	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=11.401;DP=983;FS=10.217;HRun=0;HaplotypeScore=302.7266;InbreedingCoeff=0.6762;MQ=49.04;MQ0=45;MQRankSum=-8.792;QD=25.07;ReadPosRankSum=-1.118;VQSLOD=2.3520;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,25:33:17.71:351,18,0	0/1:4,0:7:2.83:3,0,43	0/0:88,0:15:25.19:0,25,309	0/0:97,0:7:4.68:0,5,100	0/0:29,0:29:63.22:0,63,2222	0/0:23,0:23:37.70:0,38,1712	1/1:19,6:25:48.16:1084,48,0	0/0:41,0:37:72.22:0,72,1843	0/0:28,0:28:59.88:0,60,2513	0/1:24,0:32:50.99:51,0,298	0/1:15,0:18:58.29:90,0,58	0/0:34,0:34:84.28:0,84,3166	0/0:27,0:27:56.98:0,57,2566	0/0:36,0:35:87.25:0,87,3121	1/1:19,5:24:54.18:1217,54,0	0/0:13,0:15:17.16:0,17,160	0/1:9,0:16:6.72:7,0,163	1/1:9,2:12:21.07:497,21,0	0/0:31,0:29:57.19:0,57,2083	0/0:32,0:32:90.27:0,90,3539	0/0:110,0:107:99:0,254,11812	0/0:35,0:35:99:0,99,3628	0/0:29,0:29:84.27:0,84,3483	0/0:66,0:68:99:0,177,6878	1/1:1,16:17:18.06:447,18,0	1/1:37,5:41:82.51:1890,83,0	0/0:18,0:18:39.13:0,39,1711	1/1:3,3:6:9.03:231,9,0
chr10	83887140	.	GT	G	1415.91	PASS	AB=0.835;AC=11;AF=0.196;AN=56;BaseQRankSum=10.556;DP=938;FS=1.946;HRun=2;HaplotypeScore=162.2532;InbreedingCoeff=0.1154;MQ=50.46;MQ0=38;MQRankSum=-2.455;QD=7.37;ReadPosRankSum=-4.231;VQSLOD=-0.6078;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:8.03:13,0,8	0/1:5,2:7:28.37:66,0,28	0/0:78,0:10:26.92:0,27,284	0/0:92,1:12:13.42:0,13,152	0/0:23,0:23:69.23:0,69,1012	0/0:22,0:21:15.94:0,16,761	0/1:25,1:26:25.84:61,0,26	0/0:37,2:35:84.76:0,85,1302	0/0:29,0:29:78.07:0,78,1097	0/1:21,10:30:99:320,0,270	1/1:9,10:19:35.84:440,36,0	0/0:33,0:33:93.30:0,93,1363	0/0:22,2:24:65.44:0,65,987	0/0:30,0:30:87.25:0,87,1261	0/0:22,0:22:1.02:0,1,69	0/1:7,9:15:99:269,0,138	0/1:10,7:15:99:177,0,151	0/1:10,0:10:11.54:12,0,44	0/0:39,0:38:92.11:0,92,1308	0/0:31,0:31:85.45:0,85,1296	0/0:109,1:105:99:0,275,4140	0/0:34,0:34:99:0,102,1474	0/0:32,1:33:96.31:0,96,1413	0/0:71,0:71:99:0,165,2700	0/0:16,0:16:14.33:0,14,49	1/1:35,1:34:0.29:206,0,0	0/0:14,0:14:42.14:0,42,624	0/0:3,0:3:5.89:0,6,17
chr10	83887145	.	GTGT	G	1735.84	PASS	AB=0.787;AC=8;AF=0.143;AN=56;BaseQRankSum=9.420;DP=929;FS=8.654;HRun=0;HaplotypeScore=185.9321;InbreedingCoeff=-0.1635;MQ=49.66;MQ0=38;MQRankSum=-9.863;QD=10.99;ReadPosRankSum=-1.085;VQSLOD=2.6204;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:16.93:42,0,17	0/1:3,5:7:58.97:157,0,59	0/0:79,0:12:26.50:0,26,359	0/0:94,0:13:7.72:0,8,226	0/0:21,0:21:63.22:0,63,1391	0/0:23,0:23:22.52:0,23,1065	0/0:25,0:25:24.93:0,25,369	0/0:36,0:33:62.97:0,63,1530	0/0:30,0:30:78.27:0,78,1710	0/1:13,18:30:99:850,0,287	0/1:9,6:15:99:116,0,136	0/0:29,0:29:81.27:0,81,1789	0/0:26,0:26:71.52:0,72,1553	0/0:27,0:27:75.26:0,75,1668	0/0:24,0:24:60.18:0,60,432	0/1:10,5:14:99:211,0,232	0/1:8,8:15:97.69:468,0,98	0/1:8,1:9:14.88:15,0,118	0/0:41,0:40:95.48:0,95,1846	0/0:31,0:31:87.77:0,88,1872	0/0:114,0:110:99:0,292,6374	0/0:31,0:31:87.29:0,87,1892	0/0:33,0:33:90.31:0,90,1957	0/0:68,1:69:99:0,172,3750	0/0:17,0:17:19.83:0,20,105	0/1:33,0:31:10.30:10,0,479	0/0:13,0:13:36.12:0,36,787	0/0:5,0:5:14.36:0,14,118
chr10	83887154	.	GT	G	1050.65	PASS	AB=0.913;AC=7;AF=0.125;AN=56;BaseQRankSum=9.666;DP=910;FS=1.158;HRun=2;HaplotypeScore=166.8580;InbreedingCoeff=-0.1459;MQ=49.08;MQ0=34;MQRankSum=-8.851;QD=7.35;ReadPosRankSum=-2.979;VQSLOD=-0.1601;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:33.12:123,0,33	0/0:9,0:8:20.57:0,21,192	0/0:75,0:15:44.38:0,44,535	0/0:93,0:17:23.19:0,23,262	0/0:20,0:20:57.62:0,58,826	0/0:20,2:22:8.78:0,9,685	0/1:22,2:24:99:211,0,475	0/0:35,1:33:58.03:0,58,1222	0/0:30,0:30:87.11:0,87,1293	0/0:30,0:29:84.02:0,84,855	0/0:14,0:14:25.58:0,26,189	0/0:34,0:34:88.58:0,89,1286	0/0:27,0:27:78.05:0,78,1130	0/0:26,0:26:75.23:0,75,1083	0/1:13,6:19:99:367,0,239	0/0:15,0:14:24.03:0,24,234	0/0:14,1:14:30.04:0,30,289	0/1:8,2:10:53.38:53,0,146	0/0:39,0:37:76.39:0,76,1324	0/0:28,0:28:69.06:0,69,1173	0/0:114,3:114:99:0,308,4496	0/0:31,0:31:93.31:0,93,1375	0/0:27,0:27:81.26:0,81,1192	0/0:64,0:64:99:0,134,2305	0/1:19,0:19:64.84:205,0,65	0/1:29,5:32:99:161,0,592	0/0:15,0:15:45.14:0,45,649	0/1:5,0:5:61.64:62,0,115
chr10	83887216	.	G	GGT	3612.64	PASS	AB=0.798;AC=15;AF=0.268;AN=56;BaseQRankSum=12.358;DP=1112;FS=2.322;HRun=0;HaplotypeScore=220.3255;InbreedingCoeff=0.1374;MQ=39.13;MQ0=134;MQRankSum=-12.230;QD=10.75;ReadPosRankSum=-1.300;VQSLOD=2.8067;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,9:26:21.08:225,0,21	0/1:12,2:11:56.89:75,0,57	0/0:47,0:1:2.68:0,3,11	0/0:60,0:6:2.50:0,2,9	0/0:18,0:12:21.07:0,21,288	0/0:27,1:25:57.26:0,57,828	1/1:22,8:25:19.32:279,19,0	0/0:75,0:48:91.18:0,91,1185	0/0:44,0:32:83.92:0,84,1083	0/1:50,12:47:99:965,0,168	0/1:15,4:18:23.23:80,0,23	0/0:53,0:47:73.22:0,73,1186	0/0:35,0:29:54.11:0,54,645	0/0:27,0:24:60.15:0,60,757	0/1:14,12:20:21.51:239,0,22	1/1:18,9:22:18.64:501,19,0	0/1:20,6:21:72.30:149,0,72	0/1:11,4:12:79.80:171,0,80	0/0:47,0:22:36.56:0,37,440	0/0:28,0:22:48.16:0,48,643	0/0:160,0:144:99:0,254,3485	0/0:34,0:31:57.19:0,57,767	0/0:17,0:14:27.09:0,27,363	0/0:71,1:65:99:0,137,1722	0/1:12,8:17:32.95:137,0,33	0/1:49,7:34:38.15:528,0,38	0/0:20,0:16:28.31:0,28,433	1/1:8,4:10:9.43:264,9,0
chr10	83887223	.	T	TGTG	3679.93	PASS	AB=0.924;AC=13;AF=0.232;AN=56;BaseQRankSum=13.822;DP=1108;FS=0.791;HRun=0;HaplotypeScore=229.4889;InbreedingCoeff=-0.0745;MQ=37.67;MQ0=149;MQRankSum=-12.232;QD=11.22;ReadPosRankSum=-2.056;VQSLOD=2.5535;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,3:25:77.02:186,0,77	0/1:13,1:11:19.97:54,0,20	0/0:47,0:3:5.84:0,6,35	0/0:57,0:4:5.38:0,5,43	0/0:20,0:14:31.35:0,31,493	0/0:30,0:27:73.47:0,73,1120	0/1:28,3:25:6.46:228,0,6	0/0:86,0:53:99:0,99,1445	0/0:48,0:32:81.23:0,81,1242	0/1:53,5:42:99:1087,0,114	0/1:17,0:16:26.87:27,0,39	0/0:54,0:47:97.11:0,97,1477	0/0:30,0:24:57.95:0,58,832	0/0:28,0:24:60.20:0,60,927	0/1:24,2:20:44.18:204,0,44	1/1:31,0:26:15.55:382,16,0	0/1:25,0:19:66.45:208,0,66	0/1:15,2:11:75.15:188,0,75	0/0:48,0:23:39.04:0,39,551	0/0:27,0:21:48.15:0,48,738	0/0:168,0:146:99:0,254,4261	0/0:32,0:27:63.01:0,63,1012	0/0:19,0:15:23.74:0,24,359	0/0:66,0:56:99:0,108,1804	0/1:16,2:13:25.88:176,0,26	0/1:46,3:26:62.61:582,0,63	0/0:19,0:15:19.87:0,20,531	0/1:12,3:10:8.23:358,0,8
chr10	83887225	.	T	TG	2406.45	PASS	AB=0.838;AC=11;AF=0.196;AN=56;BaseQRankSum=13.613;DP=1120;FS=4.083;HRun=1;HaplotypeScore=210.5278;InbreedingCoeff=-0.2500;MQ=37.35;MQ0=150;MQRankSum=-12.753;QD=7.57;ReadPosRankSum=-0.544;VQSLOD=0.5792;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,5:26:65.87:148,0,66	0/1:13,1:11:37.35:55,0,37	0/0:45,0:3:9.02:0,9,94	0/0:58,0:4:6.02:0,6,75	0/0:21,0:14:33.11:0,33,427	0/0:30,0:27:74.71:0,75,924	0/1:27,6:27:23.65:179,0,24	0/0:87,0:55:99:0,105,1268	0/0:50,0:34:84.24:0,84,1045	0/1:51,6:41:99:611,0,118	0/0:12,4:15:3.62:0,4,47	0/0:54,0:47:99:0,99,1243	0/0:31,0:24:61.02:0,61,760	0/0:29,0:25:66.15:0,66,816	0/1:18,9:20:86.12:123,0,86	0/1:21,9:25:17.88:339,0,18	0/1:17,7:19:45.25:239,0,45	0/1:17,2:11:75.49:87,0,75	0/0:50,0:24:43.57:0,44,538	0/0:27,0:21:48.14:0,48,607	0/0:166,0:143:99:0,236,3490	0/0:31,0:26:65.95:0,66,834	0/0:20,0:16:32.90:0,33,410	0/0:67,0:58:99:0,123,1510	0/1:12,6:13:35.33:128,0,35	0/1:44,5:26:60.69:421,0,61	0/0:18,0:15:9.59:0,10,427	0/1:15,2:12:12.15:224,0,12
chr10	83887232	.	GTGGT	G	3444.37	PASS	AB=0.908;AC=13;AF=0.232;AN=56;BaseQRankSum=14.547;DP=1127;FS=0.000;HRun=0;HaplotypeScore=241.4571;InbreedingCoeff=0.1003;MQ=38.18;MQ0=148;MQRankSum=-13.303;QD=10.50;ReadPosRankSum=-1.154;VQSLOD=2.7530;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,4:28:39.24:325,0,39	1/1:11,4:11:10.08:247,10,0	0/0:44,0:5:15.03:0,15,194	0/0:56,0:4:8.96:0,9,101	0/0:23,0:15:36.12:0,36,868	0/0:31,0:28:58.55:0,59,1703	0/1:26,6:26:16.06:219,0,16	0/0:82,0:53:73.86:0,74,1992	0/0:49,0:33:85.95:0,86,1835	0/1:48,10:40:99:720,0,262	0/0:14,1:14:3:0,3,27	0/0:49,0:43:90.67:0,91,1993	0/0:33,0:26:64.09:0,64,1341	0/0:32,0:27:70.85:0,71,1441	0/1:27,2:22:12.41:189,0,12	1/1:20,9:24:24.40:548,24,0	0/1:22,2:17:47.61:270,0,48	0/1:20,0:12:27.58:28,0,124	0/0:43,0:25:50.66:0,51,950	0/0:24,0:18:45.15:0,45,1040	0/0:171,0:147:99:0,225,6601	0/0:31,0:26:62.87:0,63,1446	0/0:22,0:18:35.02:0,35,750	0/0:71,0:61:99:0,106,2736	0/1:18,1:14:47.38:169,0,47	0/1:46,7:29:80.46:570,0,80	0/0:21,0:16:41.31:0,41,758	0/1:16,2:13:6.09:161,0,6
chr10	83887234	.	GGT	G	1728.23	PASS	AB=0.973;AC=16;AF=0.286;AN=56;BaseQRankSum=13.657;DP=1105;FS=4.363;HRun=0;HaplotypeScore=224.3702;InbreedingCoeff=0.3144;MQ=38.17;MQ0=139;MQRankSum=-12.226;QD=5.14;ReadPosRankSum=-2.673;VQSLOD=2.3283;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,1:28:11.65:160,0,12	1/1:13,1:10:11.99:101,12,0	0/0:41,0:5:14.97:0,15,153	0/0:57,0:4:8.95:0,9,74	0/0:23,0:15:30.10:0,30,484	0/0:30,0:27:31.70:0,32,854	0/1:33,0:27:11.35:86,0,11	0/0:79,1:51:67.02:0,67,832	0/0:48,1:33:18.88:0,19,856	0/1:52,2:37:99:316,0,120	0/1:16,0:15:6.27:6,0,19	0/0:45,1:41:32.68:0,33,945	0/0:31,0:24:54.10:0,54,746	0/0:32,0:27:59.66:0,60,826	1/1:25,3:21:21.28:142,21,0	1/1:25,3:24:52.51:414,53,0	0/1:24,0:17:22.82:144,0,23	0/1:21,0:13:5.96:6,0,61	0/0:43,0:24:44.59:0,45,572	0/0:25,0:20:36.12:0,36,557	0/0:165,0:144:99:0,198,3558	0/0:28,1:25:14.11:0,14,697	0/0:20,0:17:10.01:0,10,404	0/0:69,0:61:77.92:0,78,1344	0/1:17,2:14:20.35:89,0,20	0/1:47,3:27:18.80:331,0,19	0/0:23,0:18:27.81:0,28,389	1/1:16,1:13:14.77:111,15,0
chr10	83887274	.	GGTGTGTGT	G	5757.58	PASS	AB=0.780;AC=14;AF=0.259;AN=54;BaseQRankSum=10.216;DP=1000;FS=0.423;HRun=0;HaplotypeScore=258.3863;InbreedingCoeff=0.3440;MQ=42.35;MQ0=74;MQRankSum=-12.093;QD=24.29;ReadPosRankSum=0.760;VQSLOD=4.0630;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,8:20:27.21:401,0,27	1/1:5,7:12:15.48:336,15,0	./.	0/0:89,0:9:6.02:0,6,100	0/0:24,0:24:57.19:0,57,1803	0/0:20,0:24:59.99:0,60,1772	0/1:16,13:27:29.69:880,0,30	0/0:55,0:43:75.10:0,75,1849	0/0:32,0:33:78.26:0,78,2281	0/1:30,4:23:26.84:413,0,27	0/0:9,1:10:5.23:0,5,73	0/0:28,0:30:42.01:0,42,1189	0/0:21,0:22:33.26:0,33,1568	0/0:36,0:36:87.30:0,87,2974	1/1:12,12:20:5.18:456,5,0	1/1:15,10:23:10.21:1038,10,0	0/1:12,6:17:41.93:469,0,42	0/0:11,1:9:10.58:0,11,112	0/0:48,0:30:36.12:0,36,1194	0/0:17,0:16:36.11:0,36,1330	0/0:156,0:149:99:0,287,8764	0/0:23,0:25:49.26:0,49,1333	0/0:21,0:22:39.13:0,39,1108	0/0:50,0:46:96.12:0,96,3009	1/1:12,6:15:30.01:524,30,0	0/1:34,8:31:99:864,0,192	0/0:15,0:16:32.69:0,33,880	0/1:8,3:9:47.53:376,0,48
chr10	83887311	.	TGTGTG	T	1225.17	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.157;DP=947;FS=14.652;HRun=0;HaplotypeScore=205.7544;InbreedingCoeff=0.8602;MQ=50.64;MQ0=62;MQRankSum=-7.306;QD=13.61;ReadPosRankSum=-0.622;VQSLOD=1.5881;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,15:27:24.08:446,24,0	0/0:11,0:11:12.04:0,12,282	0/0:88,0:12:12.75:0,13,131	0/0:97,0:18:7.99:0,8,275	0/0:17,0:15:24.08:0,24,650	0/0:25,0:25:57.20:0,57,1615	0/0:35,0:32:51.98:0,52,1200	0/0:40,0:34:53.66:0,54,1274	0/0:34,0:33:66.23:0,66,1794	0/0:24,0:19:34.38:0,34,1030	0/0:10,0:10:21.07:0,21,600	0/0:31,0:29:48.16:0,48,1387	0/0:27,0:24:52.25:0,52,1545	0/0:39,0:38:69.24:0,69,1787	1/1:12,9:15:2.82:56,3,0	0/0:19,0:17:21.03:0,21,503	0/0:20,0:15:36.12:0,36,961	1/1:2,2:1:3.01:57,3,0	0/0:34,0:26:39.13:0,39,984	0/0:23,0:23:30.10:0,30,776	0/0:157,0:144:99:0,233,6751	0/0:17,0:17:36.12:0,36,1014	0/0:14,0:14:15.05:0,15,379	0/0:52,0:48:99:0,102,2741	0/0:16,0:14:18.49:0,18,335	1/1:14,13:21:29.38:650,29,0	0/0:21,0:21:54.19:0,54,1509	1/1:5,3:5:9.03:170,9,0
chr10	83887367	.	A	AGTGT	4384.65	PASS	AB=0.724;AC=19;AF=0.339;AN=56;BaseQRankSum=5.186;DP=1068;FS=2.445;HRun=0;HaplotypeScore=219.7175;InbreedingCoeff=0.6488;MQ=48.67;MQ0=42;MQRankSum=-3.242;QD=14.76;ReadPosRankSum=-1.972;VQSLOD=4.4601;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,2:27:20.66:302,21,0	1/1:3,2:6:8.77:157,9,0	0/0:81,0:11:9.03:0,9,144	0/0:78,0:18:15.81:0,16,169	0/0:12,0:13:30.07:0,30,425	0/0:26,0:29:60.14:0,60,869	0/1:40,0:41:44.28:230,0,44	0/0:53,0:47:50.17:0,50,801	0/0:44,0:45:79.81:0,80,1258	1/1:32,11:37:61.57:1210,62,0	1/1:10,4:13:12.04:245,12,0	0/0:42,0:44:84.62:0,85,1318	0/0:28,0:28:66.10:0,66,1039	0/0:30,0:29:54.12:0,54,826	0/1:4,0:23:24.14:24,0,42	1/1:10,16:26:2.52:422,3,0	1/1:27,12:36:13.03:994,13,0	1/1:7,1:16:0.79:78,1,0	0/0:24,0:18:11.53:0,12,218	0/0:19,0:21:29.58:0,30,410	0/0:157,0:151:99:0,180,3411	0/0:21,0:21:45.10:0,45,688	0/0:22,0:23:51.17:0,51,800	0/0:65,0:64:99:0,120,1837	0/0:15,0:14:8.22:0,8,48	1/1:35,3:35:20.38:626,20,0	0/0:24,0:24:34.35:0,34,520	0/1:3,0:6:12.30:96,0,12
chr10	83887375	.	T	TA	72.42	PASS	AB=0.870;AC=2;AF=0.036;AN=56;BaseQRankSum=5.836;DP=1105;FS=0.000;HRun=0;HaplotypeScore=200.2079;InbreedingCoeff=-0.0357;MQ=48.95;MQ0=39;MQRankSum=-5.221;QD=1.65;ReadPosRankSum=-2.533;VQSLOD=1.9707;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:31:24.70:0,25,291	0/0:7,0:7:11.85:0,12,100	0/0:83,0:9:19.61:0,20,245	0/0:78,0:22:28.69:0,29,590	0/0:17,0:17:48.03:0,48,642	0/0:29,0:29:80.69:0,81,994	0/0:41,0:41:79.39:0,79,967	0/0:52,0:47:93.52:0,94,1336	0/0:46,0:45:99:0,120,1586	0/0:44,0:37:91.34:0,91,822	0/0:15,0:14:28.58:0,29,316	0/0:50,0:49:99:0,109,1426	0/0:31,0:29:84.14:0,84,1135	0/0:34,0:33:81.22:0,81,1126	0/1:27,0:26:5.72:6,0,71	0/0:27,0:26:43.40:0,43,366	0/0:44,0:41:92.85:0,93,931	0/0:25,0:21:26.99:0,27,325	0/0:24,0:19:35.62:0,36,466	0/0:21,0:21:47.97:0,48,642	0/0:162,0:145:99:0,337,4391	0/0:28,0:27:72.07:0,72,951	0/0:22,0:22:58.75:0,59,782	0/0:72,0:69:99:0,161,2168	0/1:11,6:16:84.31:146,0,84	0/0:43,0:38:99:0,102,1267	0/0:21,0:21:60.16:0,60,792	0/0:7,0:6:11.85:0,12,109
chr10	83887401	.	TG	T	330.11	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.381;DP=950;FS=7.183;HRun=2;HaplotypeScore=174.3671;InbreedingCoeff=0.9820;MQ=56.40;MQ0=8;MQRankSum=-5.314;QD=23.58;ReadPosRankSum=-1.303;VQSLOD=2.4255;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:82.46:0,82,1294	0/0:8,0:8:15.02:0,15,202	0/0:47,0:26:56.66:0,57,993	0/0:51,1:32:70.80:0,71,1094	0/0:21,0:21:63.19:0,63,904	0/0:28,0:28:81.27:0,81,1207	0/0:42,0:42:86.24:0,86,1182	0/0:28,0:27:74.84:0,75,1090	0/0:43,0:43:99:0,129,1908	0/0:39,1:35:82.64:0,83,1362	0/0:20,0:19:47.74:0,48,665	0/0:37,0:37:90.19:0,90,1329	0/0:30,0:30:81.27:0,81,1199	0/0:33,1:33:87.25:0,87,1259	0/0:29,0:29:44.05:0,44,560	0/0:25,0:25:56.32:0,56,758	0/0:39,1:37:44.03:0,44,1271	0/0:25,2:24:42.14:0,42,629	0/0:16,0:15:42.14:0,42,629	0/0:22,0:22:66.18:0,66,964	0/0:112,3:108:99:0,256,4020	0/0:30,0:30:84.28:0,84,1258	0/0:22,0:22:64.46:0,64,948	0/0:61,0:59:99:0,166,2423	1/1:1,13:14:33.11:425,33,0	0/0:43,0:41:40.16:0,40,1430	0/0:20,0:19:54.18:0,54,809	0/0:11,0:10:24.08:0,24,359
chr10	83887402	.	G	GT	54.37	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.574;DP=953;FS=2.972;HRun=1;HaplotypeScore=177.9931;InbreedingCoeff=0.9817;MQ=57.70;MQ0=7;MQRankSum=-5.819;QD=3.62;ReadPosRankSum=-2.361;VQSLOD=-0.5895;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:98.67:0,99,1234	0/0:8,0:8:15.02:0,15,190	0/0:48,0:27:41.95:0,42,911	0/0:51,0:32:60.35:0,60,1008	0/0:21,0:21:63.19:0,63,847	0/0:28,0:28:81.27:0,81,1128	0/0:43,1:44:85.63:0,86,1106	0/0:28,1:28:68.89:0,69,1000	0/0:43,0:43:99:0,129,1778	0/0:40,0:36:78.31:0,78,1267	0/0:21,0:20:46.69:0,47,617	0/0:37,0:37:90.29:0,90,1242	0/0:28,1:29:81.27:0,81,1117	0/0:33,0:33:87.25:0,87,1178	0/0:29,0:29:38.06:0,38,513	0/0:25,0:25:54.24:0,54,698	0/0:39,0:37:45.42:0,45,1183	0/0:28,0:25:42.14:0,42,587	0/0:17,0:16:42.14:0,42,586	0/0:22,0:22:66.18:0,66,901	0/0:109,2:107:99:0,232,3727	0/0:30,0:30:84.28:0,84,1173	0/0:21,1:22:62.94:0,63,880	0/0:60,0:58:99:0,166,2269	1/1:15,0:15:29.61:149,30,0	0/0:42,0:40:54.07:0,54,1351	0/0:20,0:19:54.18:0,54,752	0/0:10,0:10:24.08:0,24,335
chr10	83888460	.	CTGTGTGTGTGTGTG	C	69.23	PASS	AB=0.786;AC=5;AF=0.096;AN=52;BaseQRankSum=3.085;DP=504;FS=0.000;HRun=0;HaplotypeScore=150.3284;InbreedingCoeff=0.2531;MQ=42.88;MQ0=40;MQRankSum=-2.794;QD=0.80;ReadPosRankSum=-1.732;VQSLOD=2.4634;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,1:27:34.45:49,0,34	0/1:4,0:4:2.50:2,0,197	./.	./.	0/0:16,0:16:30.10:0,30,1414	0/0:13,0:11:6.02:0,6,289	1/1:26,7:29:1.68:109,2,0	0/0:21,0:18:18.06:0,18,499	0/0:16,0:15:16.30:0,16,754	0/0:24,0:22:39.53:0,40,974	0/0:11,0:9:3.48:0,3,104	0/0:20,0:18:18.06:0,18,743	0/0:13,0:11:9.03:0,9,396	0/0:12,0:11:9.03:0,9,419	0/0:26,0:25:12.04:0,12,416	0/0:13,0:13:9.03:0,9,294	0/0:23,0:20:36.89:0,37,1055	0/0:24,0:20:42.10:0,42,1606	0/0:14,0:15:11.27:0,11,85	0/0:13,0:13:12.04:0,12,468	0/0:36,0:32:24.08:0,24,1014	0/0:10,0:10:12.04:0,12,637	0/0:12,0:9:9.03:0,9,367	0/0:43,0:39:36.12:0,36,1668	0/1:10,1:16:0.02:0,0,0	0/0:19,0:20:29.94:0,30,475	0/0:14,0:13:15.39:0,15,517	0/0:16,0:11:15.05:0,15,324
chr10	83890045	.	A	AT	176.22	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.739;DP=543;FS=0.940;HRun=10;HaplotypeScore=64.2046;InbreedingCoeff=0.9048;MQ=79.96;MQ0=0;MQRankSum=-0.020;QD=13.56;ReadPosRankSum=-0.018;VQSLOD=3.5659;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,1:50:99:0,103,1050	0/0:5,0:5:11.98:0,12,98	0/0:25,0:19:9.98:0,10,131	0/0:19,0:18:19.13:0,19,187	0/0:18,0:20:52:0,52,406	0/0:27,0:28:73.92:0,74,592	0/0:27,0:28:70.92:0,71,569	0/0:25,1:26:27.92:0,28,434	0/0:13,0:13:32.44:0,32,252	0/0:18,0:18:41.94:0,42,345	0/0:14,0:14:38.95:0,39,320	0/0:10,0:11:30.82:0,31,232	0/0:17,0:17:44.95:0,45,369	0/0:19,0:19:56.91:0,57,462	0/0:19,0:19:38.92:0,39,320	0/0:15,0:15:35.94:0,36,296	0/0:27,1:29:41.94:0,42,540	0/0:32,0:32:83.61:0,84,683	0/0:18,0:18:47.92:0,48,391	0/0:8,0:8:17.96:0,18,148	0/0:16,0:16:29.92:0,30,243	0/0:13,0:13:29.94:0,30,246	0/0:12,0:12:35.96:0,36,295	0/0:11,0:11:26.96:0,27,222	1/1:2,10:13:26.90:270,27,0	0/0:27,0:27:46.63:0,47,517	0/0:23,0:23:19.11:0,19,362	0/0:12,0:12:35.96:0,36,295
chr10	83891378	.	GGTGTGTGTGTGTGT	G	1852.47	PASS	AB=0.922;AC=12;AF=0.214;AN=56;BaseQRankSum=6.426;DP=628;FS=6.853;HRun=0;HaplotypeScore=227.8063;InbreedingCoeff=0.6674;MQ=67.63;MQ0=6;MQRankSum=-5.265;QD=14.25;ReadPosRankSum=2.115;VQSLOD=1.5147;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,5:30:21.54:777,22,0	0/0:8,0:8:12.51:0,13,636	0/0:30,0:23:3.01:0,3,85	0/0:29,0:23:15.51:0,16,315	0/0:26,0:29:42.13:0,42,2337	0/0:19,0:19:39.12:0,39,2149	0/0:25,0:29:40.84:0,41,2156	0/0:28,0:28:37.34:0,37,1415	0/0:16,0:16:24.08:0,24,1416	0/0:15,0:14:24.14:0,24,914	1/1:11,0:11:0.47:1,0,0	0/0:20,0:20:45.15:0,45,2506	0/0:16,0:16:27.09:0,27,1236	0/0:15,0:15:21.07:0,21,1295	1/1:14,10:25:18.06:670,18,0	0/0:16,0:17:6.02:0,6,271	0/0:21,0:30:33.02:0,33,1307	1/1:14,2:17:11.26:449,11,0	0/0:21,0:21:9.03:0,9,606	0/1:11,0:11:0.16:0,0,192	0/0:55,0:58:81.26:0,81,4238	0/0:22,0:24:42.11:0,42,1892	0/0:16,0:17:30.10:0,30,1359	0/0:41,0:43:93.32:0,93,5021	0/0:10,0:15:12.04:0,12,433	0/1:22,0:26:70.94:71,0,427	0/0:16,0:17:16.30:0,16,720	1/1:5,0:8:5.88:35,6,0
chr10	83893347	.	T	TG	2140.99	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-8.181;DP=436;FS=22.995;HRun=6;HaplotypeScore=49.0851;InbreedingCoeff=0.9560;MQ=83.83;MQ0=0;MQRankSum=-4.907;QD=20.59;ReadPosRankSum=0.198;VQSLOD=1.8608;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:33.11:415,33,0	1/1:0,6:6:9.03:108,9,0	0/0:17,0:17:7.02:0,7,276	0/0:13,0:13:32.26:0,32,267	0/0:14,0:15:20.97:0,21,352	0/0:18,0:18:45.06:0,45,449	1/1:5,16:21:30.10:377,30,0	0/0:20,0:20:45.09:0,45,458	0/0:13,0:13:30.06:0,30,306	1/1:3,8:11:24.08:302,24,0	1/1:1,7:8:12.04:151,12,0	0/0:10,0:10:30.07:0,30,305	0/0:19,0:19:54.12:0,54,550	0/0:21,0:21:57.09:0,57,571	0/0:20,0:20:57.12:0,57,581	1/1:1,15:16:33.10:415,33,0	1/1:2,21:23:45.14:566,45,0	0/0:30,0:30:78.17:0,78,794	0/0:8,0:8:24.05:0,24,244	0/0:11,0:11:27.06:0,27,274	0/0:37,0:37:99:0,99,990	0/0:16,0:16:33.07:0,33,336	0/0:5,0:5:12.02:0,12,117	0/0:21,0:21:54.08:0,54,534	0/0:7,0:7:18.04:0,18,182	0/0:14,0:14:36.08:0,36,367	0/0:12,0:12:33.07:0,33,337	0/0:5,0:5:15.03:0,15,153
chr10	83893705	.	A	AAC	3423.49	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.256;DP=689;FS=13.652;HRun=0;HaplotypeScore=88.3411;InbreedingCoeff=0.9887;MQ=73.73;MQ0=4;MQRankSum=-1.936;QD=32.30;ReadPosRankSum=1.377;VQSLOD=4.9901;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,102,1237	1/1:1,5:6:12.04:196,12,0	0/0:42,0:34:56.23:0,56,674	0/0:46,0:36:68.30:0,68,688	0/0:15,0:15:42.12:0,42,505	0/0:25,0:25:66.04:0,66,790	0/0:34,0:35:63.56:0,64,910	0/0:34,0:35:81.05:0,81,931	0/0:22,0:23:66.01:0,66,764	1/1:6,20:26:63.20:989,63,0	1/1:3,9:12:27.09:440,27,0	0/0:23,0:23:54.12:0,54,633	0/0:21,0:21:57.17:0,57,689	0/0:17,0:17:42.13:0,42,517	0/0:31,0:32:84.09:0,84,1011	1/1:6,21:27:60.20:967,60,0	1/1:6,26:34:51.17:831,51,0	0/0:28,0:28:33.25:0,33,775	0/0:26,0:26:57.16:0,57,677	0/0:11,0:11:27.07:0,27,322	0/0:28,0:28:69.18:0,69,832	0/0:16,0:16:42.13:0,42,517	0/0:10,0:10:22.31:0,22,261	0/0:33,0:33:90.28:0,90,1106	0/0:9,0:9:21.07:0,21,259	0/0:30,0:31:75.06:0,75,886	0/0:24,0:26:60.01:0,60,703	0/0:8,0:8:18.06:0,18,222
chr10	83893982	.	G	GA	6409.09	PASS	AB=0.713;AC=50;AF=0.962;AN=52;BaseQRankSum=-2.399;DP=155;FS=21.326;HRun=1;HaplotypeScore=18.6835;InbreedingCoeff=-0.0785;MQ=80.95;MQ0=0;MQRankSum=-2.315;QD=41.62;ReadPosRankSum=0.513;VQSLOD=2.4287;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:24.08:360,24,0	1/1:0,1:1:3.01:45,3,0	0/1:2,3:5:13.51:122,0,14	0/1:3,1:3:23.91:72,0,24	1/1:0,3:3:9.03:135,9,0	1/1:0,6:6:18.06:270,18,0	1/1:0,11:11:30.10:449,30,0	1/1:0,12:12:36.12:540,36,0	1/1:0,4:4:12.04:179,12,0	1/1:0,7:7:21.06:294,21,0	1/1:1,3:4:12.04:178,12,0	1/1:0,5:5:15.05:223,15,0	1/1:0,5:5:12.04:180,12,0	1/1:0,3:3:9.03:135,9,0	1/1:0,6:6:15.05:225,15,0	1/1:0,5:5:15.05:225,15,0	1/1:0,1:1:3.01:45,3,0	./.	1/1:1,7:8:21.07:315,21,0	1/1:0,2:2:6.02:90,6,0	1/1:1,21:22:63.21:940,63,0	1/1:0,4:4:12.04:180,12,0	1/1:0,6:6:18.06:270,18,0	1/1:0,6:6:18.06:270,18,0	1/1:0,6:6:18.06:270,18,0	1/1:0,1:1:3.01:45,3,0	1/1:1,7:9:24.08:356,24,0	./.
chr10	83894041	.	TC	T	303.11	PASS	AC=2;AF=0.040;AN=50;BaseQRankSum=3.668;DP=165;FS=0.000;HRun=4;HaplotypeScore=20.0090;InbreedingCoeff=0.4824;MQ=112.26;MQ0=0;MQRankSum=-2.828;QD=25.26;ReadPosRankSum=2.305;VQSLOD=1.7947;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:33.10:396,33,0	./.	0/0:14,0:15:45.14:0,45,606	0/0:12,0:12:36.12:0,36,503	./.	0/0:5,0:5:15.05:0,15,210	0/0:11,0:11:33.10:0,33,445	0/0:9,0:9:27.09:0,27,378	0/0:5,0:5:15.05:0,15,210	0/0:3,0:3:9.03:0,9,126	0/0:2,0:2:6.02:0,6,84	0/0:5,0:5:15.05:0,15,210	0/0:6,0:6:18.06:0,18,252	0/0:4,0:4:12.04:0,12,168	0/0:8,0:8:24.07:0,24,319	0/0:4,0:4:12.04:0,12,168	0/0:10,0:10:30.09:0,30,403	0/0:7,0:7:21.07:0,21,294	0/0:8,0:8:24.07:0,24,321	./.	0/0:13,0:13:39.13:0,39,546	0/0:1,0:1:3.01:0,3,42	0/0:2,0:2:6.02:0,6,84	0/0:11,0:11:30.06:0,30,393	0/0:1,0:1:3.01:0,3,42	0/0:4,0:4:12.04:0,12,168	0/0:6,0:6:18.06:0,18,252	0/0:1,0:1:3.01:0,3,42
chr10	83895796	.	A	ACCTCTT	3513.49	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=14.215;DP=699;FS=4.421;HRun=0;HaplotypeScore=154.4809;InbreedingCoeff=0.2993;MQ=73.46;MQ0=2;MQRankSum=-5.126;QD=15.21;ReadPosRankSum=-2.933;VQSLOD=2.3694;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,15:32:21.03:526,21,0	0/1:8,0:8:17.50:18,0,30	0/0:36,0:23:36.10:0,36,537	0/0:36,0:32:35.21:0,35,572	0/0:25,0:25:54.07:0,54,1023	0/0:24,0:24:45.07:0,45,803	0/0:23,0:23:45.81:0,46,679	0/0:36,0:36:57.11:0,57,787	0/0:25,0:25:57.16:0,57,1090	0/1:26,0:25:51.40:90,0,51	0/1:23,0:23:50.28:50,0,56	0/0:21,0:21:57.13:0,57,944	0/0:24,0:24:57.16:0,57,1031	0/0:24,0:24:57.20:0,57,1167	0/1:33,0:33:63.75:64,0,68	0/1:17,0:17:46.69:53,0,47	0/1:28,0:28:22.91:107,0,23	0/1:22,0:21:35.68:100,0,36	0/0:14,0:14:24.08:0,24,489	0/0:21,0:21:39.09:0,39,693	0/0:44,0:44:99:0,108,1904	0/0:24,0:24:51.14:0,51,896	0/0:19,0:19:45.10:0,45,808	0/0:33,0:33:75.22:0,75,1432	0/0:20,0:20:45.09:0,45,804	1/1:23,0:23:59.78:1565,60,0	0/0:19,0:19:48.12:0,48,896	1/1:19,0:19:39.12:941,39,0
chr10	83895813	.	T	TTCC	5256.24	PASS	AB=0.980;AC=18;AF=0.321;AN=56;BaseQRankSum=5.027;DP=716;FS=2.990;HRun=0;HaplotypeScore=108.2573;InbreedingCoeff=0.8275;MQ=60.47;MQ0=7;MQRankSum=-2.328;QD=20.94;ReadPosRankSum=3.037;VQSLOD=4.5818;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:36:23.83:24,0,584	1/1:2,6:8:15.05:267,15,0	0/0:28,0:16:15.04:0,15,193	0/0:23,0:20:18.04:0,18,221	0/0:23,0:23:60.19:0,60,848	0/0:21,0:21:50.88:0,51,664	0/0:27,0:26:47.98:0,48,606	0/0:37,0:35:54.15:0,54,698	0/0:26,0:26:60.20:0,60,866	1/1:8,24:31:72.10:1240,72,0	1/1:8,13:21:36.12:692,36,0	0/0:29,0:29:69.18:0,69,906	0/0:21,0:21:57.19:0,57,821	0/0:23,0:23:66.21:0,66,931	1/1:6,23:29:24.08:487,24,0	1/1:5,17:21:30.10:614,30,0	1/1:6,27:34:32.13:1021,32,0	1/1:9,17:25:15.52:301,16,0	0/0:18,0:18:45.02:0,45,542	0/0:21,0:21:42.13:0,42,589	0/0:49,0:48:99:0,111,1488	0/0:26,0:26:60.14:0,60,774	0/0:17,0:17:42.14:0,42,604	0/0:28,0:28:72.21:0,72,1001	0/0:25,0:25:54.14:0,54,713	0/1:23,1:24:99:316,0,162	0/0:22,0:22:54.17:0,54,771	1/1:18,0:18:32.95:295,33,0
chr10	83895818	.	C	CTT	319.85	PASS	AB=0.846;AC=3;AF=0.054;AN=56;BaseQRankSum=8.169;DP=715;FS=4.982;HRun=1;HaplotypeScore=113.4656;InbreedingCoeff=0.0764;MQ=56.46;MQ0=8;MQRankSum=-5.401;QD=4.77;ReadPosRankSum=4.064;VQSLOD=-0.2475;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:25.77:0,26,815	0/0:8,0:8:14.56:0,15,127	0/0:24,0:12:36.12:0,36,566	0/0:20,0:16:44.67:0,45,636	0/0:23,0:23:66.23:0,66,1074	0/0:20,0:20:60.20:0,60,974	0/0:27,0:26:72.20:0,72,1100	0/0:36,0:34:99:0,99,1489	0/0:26,0:26:78.23:0,78,1197	0/0:34,0:32:71.51:0,72,547	0/1:26,0:26:1.76:2,0,214	0/0:30,0:30:90.29:0,90,1419	0/0:22,0:22:63.22:0,63,1026	0/0:22,0:22:66.23:0,66,1075	0/0:30,0:30:19:0,19,214	0/0:24,0:22:32.60:0,33,238	0/0:35,0:35:55.17:0,55,364	0/0:25,0:24:7.20:0,7,279	0/0:19,0:19:57.06:0,57,844	0/0:19,0:19:54.17:0,54,849	0/0:51,0:50:99:0,144,2292	0/0:26,0:26:72.20:0,72,1065	0/0:20,0:20:60.13:0,60,857	0/0:28,0:28:81.27:0,81,1297	0/0:23,0:23:63.21:0,63,1016	0/1:19,7:26:99:236,0,169	0/0:21,0:21:59.99:0,60,977	0/1:10,5:15:6.34:173,0,6
chr10	83895819	.	C	CCTCT	938.62	PASS	AB=0.897;AC=4;AF=0.071;AN=56;BaseQRankSum=11.123;DP=720;FS=3.517;HRun=0;HaplotypeScore=139.2156;InbreedingCoeff=0.3665;MQ=56.45;MQ0=8;MQRankSum=-8.916;QD=13.22;ReadPosRankSum=4.800;VQSLOD=3.0741;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:21.57:0,22,1023	0/0:9,0:9:8.77:0,9,111	0/0:23,0:12:36.12:0,36,674	0/0:20,0:16:42.14:0,42,791	0/0:23,0:23:69.22:0,69,1387	0/0:22,0:22:60.20:0,60,1178	0/0:27,0:26:72.22:0,72,1362	0/0:38,0:36:99:0,102,1830	0/0:27,0:27:78.20:0,78,1464	0/0:34,0:32:50.54:0,51,498	0/0:26,0:26:2.28:0,2,278	0/0:29,0:29:87.29:0,87,1742	0/0:22,0:22:66.20:0,66,1332	0/0:22,0:22:66.23:0,66,1383	0/1:29,0:29:10.96:11,0,182	0/0:24,0:22:20.57:0,21,222	0/0:35,0:35:32.44:0,32,311	0/0:25,0:24:3.16:0,3,210	0/0:20,0:20:57.12:0,57,1029	0/0:20,0:20:54.17:0,54,1080	0/0:51,0:50:99:0,147,2825	0/0:23,0:23:66.20:0,66,1265	0/0:20,0:20:60.15:0,60,1075	0/0:27,0:27:81.28:0,81,1690	0/0:23,0:23:63.22:0,63,1282	0/1:20,7:27:99:589,0,218	0/0:21,0:21:60.21:0,60,1241	1/1:10,5:15:32.56:451,33,0
chr10	83895828	.	CTCT	C	770.54	PASS	AB=0.969;AC=8;AF=0.143;AN=56;BaseQRankSum=9.630;DP=694;FS=10.599;HRun=0;HaplotypeScore=124.9488;InbreedingCoeff=0.1387;MQ=54.83;MQ0=8;MQRankSum=-4.594;QD=4.85;ReadPosRankSum=-1.704;VQSLOD=1.5425;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:36:10.40:10,0,1166	0/1:6,0:6:13.55:14,0,140	0/0:10,0:6:15.04:0,15,239	0/0:11,0:8:18.04:0,18,231	0/0:23,0:23:66.19:0,66,1362	0/0:24,0:24:69.12:0,69,1263	0/0:25,0:24:49.48:0,49,958	0/0:32,0:29:78.10:0,78,1177	0/0:25,0:25:75.23:0,75,1545	0/0:36,0:34:8.87:0,9,669	0/1:25,0:25:4.06:4,0,323	0/0:29,0:29:87.19:0,87,1568	0/0:22,0:22:60.15:0,60,1165	0/0:24,0:24:72.19:0,72,1427	0/1:26,0:26:31.19:31,0,119	0/0:29,0:27:37.56:0,38,482	0/0:41,0:41:74.33:0,74,873	0/1:21,1:21:64.65:65,0,69	0/0:23,0:23:62.88:0,63,887	0/0:18,0:18:48.09:0,48,966	0/0:50,0:49:99:0,127,2622	0/0:25,0:25:72.16:0,72,1275	0/0:18,0:18:54.08:0,54,979	0/0:25,0:25:72.20:0,72,1515	0/0:21,0:21:57.15:0,57,1135	0/1:25,5:30:99:390,0,167	0/0:22,0:22:64.42:0,64,1268	1/1:11,3:14:38.23:394,38,0
chr10	83896119	.	T	TAGAAAGAAAGAAAGAAAGAA	21342.24	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=12.444;DP=615;FS=3.460;HRun=0;HaplotypeScore=348.5511;InbreedingCoeff=0.8542;MQ=56.92;MQ0=1;MQRankSum=-14.303;QD=76.22;ReadPosRankSum=-2.627;VQSLOD=3.5430;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:33.20:2062,33,0	1/1:13,0:13:29.94:1137,30,0	0/0:16,0:13:2.95:0,3,22	0/0:13,0:7:3.01:0,3,69	0/0:33,0:33:69.22:0,69,3187	0/0:18,0:18:30.10:0,30,1486	1/1:27,0:27:63.05:2745,63,0	0/0:25,0:25:39.08:0,39,862	0/0:23,0:23:42.13:0,42,1901	1/1:44,0:44:80.85:3384,81,0	1/1:27,0:27:50.96:2490,51,0	0/0:19,0:19:36.11:0,36,1442	0/0:9,0:9:18.06:0,18,881	0/0:18,0:18:42.12:0,42,1995	1/1:21,0:21:3.01:246,3,0	1/1:22,0:22:50.62:1516,51,0	1/1:20,0:20:41.88:1873,42,0	0/1:15,0:15:8.12:604,0,8	0/0:21,0:21:25.20:0,25,1132	0/0:28,0:28:51.18:0,51,2370	0/0:12,0:11:15.05:0,15,774	0/0:31,0:31:62.85:0,63,2858	0/0:23,0:23:48.10:0,48,1681	0/0:12,0:12:15.05:0,15,602	1/1:11,14:27:21.07:1574,21,0	1/1:24,0:24:51.09:2666,51,0	0/0:34,0:34:57.26:0,57,1922	1/1:6,0:6:15.05:1046,15,0
chr10	83896146	.	A	AAAGAAAGAAAGAAAGAAAGTAAGC	24738.19	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=12.845;DP=576;FS=1.450;HRun=0;HaplotypeScore=363.4787;InbreedingCoeff=0.8902;MQ=56.09;MQ0=0;MQRankSum=-13.804;QD=95.88;ReadPosRankSum=1.339;VQSLOD=3.7976;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:70.84:2418,71,0	1/1:12,0:12:36.04:1641,36,0	0/0:4,0:3:9.03:0,9,174	0/0:10,0:7:15.07:0,15,287	0/0:35,0:35:99:0,99,4427	0/0:17,0:17:48.16:0,48,2095	1/1:28,0:28:81.26:2570,81,0	0/0:28,0:28:67.15:0,67,1751	0/0:20,0:20:54.18:0,54,2569	1/1:34,0:34:99:5117,99,0	1/1:25,0:25:66.20:2833,66,0	0/0:22,0:22:63.21:0,63,2266	0/0:9,0:9:27.09:0,27,1252	0/0:17,0:17:48.14:0,48,2422	1/1:1,7:23:3.01:339,3,0	1/1:24,0:24:72.23:3625,72,0	1/1:20,0:20:57.11:2799,57,0	1/1:11,0:11:27.05:955,27,0	0/0:25,0:24:72.14:0,72,2147	0/0:24,0:24:69.22:0,69,3292	0/0:9,0:9:24.07:0,24,1049	0/0:31,0:31:89.86:0,90,3951	0/0:24,0:24:69.21:0,69,2529	0/0:15,0:15:42.10:0,42,1234	0/1:16,0:16:99:172,0,415	1/1:22,0:22:63.21:1647,63,0	0/0:28,0:28:72.21:0,72,2735	1/1:10,0:10:27.09:621,27,0
chr10	83896480	.	G	GC	631.30	PASS	AB=0.667;AC=5;AF=0.089;AN=56;BaseQRankSum=8.716;DP=654;FS=2.412;HRun=2;HaplotypeScore=77.6510;InbreedingCoeff=0.7980;MQ=76.45;MQ0=0;MQRankSum=-6.254;QD=9.71;ReadPosRankSum=-0.284;VQSLOD=1.2917;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,27:37:23.61:256,24,0	0/0:10,0:10:30.10:0,30,412	0/0:19,0:19:54.90:0,55,613	0/0:19,0:19:48.54:0,49,620	0/0:26,0:26:78.26:0,78,1076	0/0:21,0:21:63.20:0,63,863	0/0:32,0:32:74.95:0,75,476	0/0:20,0:20:57.16:0,57,734	0/0:23,0:23:69.23:0,69,962	0/0:25,0:25:75.25:0,75,1040	0/0:20,0:20:54.18:0,54,739	0/0:24,0:24:69.23:0,69,955	0/0:23,0:23:66.20:0,66,892	0/0:23,0:23:46.30:0,46,879	0/0:25,0:25:64.81:0,65,379	0/0:26,0:26:78.26:0,78,1086	0/0:36,0:36:99:0,108,1502	0/0:25,0:25:72.83:0,73,421	0/0:28,0:28:84.25:0,84,1140	0/0:17,0:17:45.15:0,45,619	0/0:28,0:28:78.26:0,78,1086	0/0:23,0:23:66.22:0,66,918	0/0:25,0:25:72.24:0,72,992	0/0:28,0:28:78.26:0,78,1089	0/0:19,0:19:51.15:0,51,691	0/1:8,6:16:10.74:245,0,11	0/0:24,0:24:63.21:0,63,877	1/1:0,11:12:24.02:259,24,0
chr10	83897244	.	GCA	G	430.84	PASS	AB=0.886;AC=13;AF=0.260;AN=50;BaseQRankSum=3.356;DP=633;FS=2.788;HRun=0;HaplotypeScore=96.7399;InbreedingCoeff=-0.0215;MQ=57.74;MQ0=6;MQRankSum=2.310;QD=2.10;ReadPosRankSum=2.628;VQSLOD=1.9634;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:34.88:0,35,314	./.	./.	./.	0/0:12,0:13:1.79:0,2,80	0/1:15,4:19:14.34:14,0,182	0/0:37,0:36:2.46:0,2,26	0/0:20,0:20:9.03:0,9,111	0/1:19,1:21:22.47:22,0,239	0/0:21,0:26:31.20:0,31,295	0/0:16,0:21:2.74:0,3,15	0/1:22,1:23:17.35:17,0,159	0/1:11,2:12:35.41:56,0,35	0/1:25,1:26:11.34:11,0,240	1/1:22,5:29:20.93:170,21,0	0/0:13,0:21:15.47:0,15,147	0/0:23,0:37:15.01:0,15,158	1/1:15,5:20:17.88:176,18,0	0/1:13,1:13:26.41:26,0,38	0/1:11,0:13:8.13:8,0,39	0/0:63,3:66:12.07:0,12,486	0/0:13,0:13:11.83:0,12,146	0/1:12,4:16:23.43:23,0,55	0/0:38,1:37:3.70:0,4,443	0/0:18,0:24:18.03:0,18,207	0/0:22,0:22:21.05:0,21,246	0/1:9,2:11:29.12:56,0,29	0/0:8,0:8:12.03:0,12,148
chr10	83899322	.	CCCACCCTACCCT	C	2843.06	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.370;DP=665;FS=0.722;HRun=0;HaplotypeScore=221.2582;InbreedingCoeff=0.9960;MQ=85.59;MQ0=0;MQRankSum=-8.673;QD=64.62;ReadPosRankSum=1.193;VQSLOD=3.4240;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:99:0,108,5739	0/0:13,0:13:36.12:0,36,2100	0/0:21,0:21:51.15:0,51,2447	0/0:26,0:26:57.11:0,57,2287	0/0:30,0:30:84.29:0,84,4485	0/0:27,0:27:69.24:0,69,3857	0/0:28,0:28:81.28:0,81,4594	0/0:31,0:31:81.28:0,81,4027	0/0:25,0:25:75.24:0,75,3975	0/0:21,0:21:60.20:0,60,3285	0/0:18,0:18:51.18:0,51,2827	0/0:23,0:23:66.21:0,66,3717	0/0:20,0:20:51.18:0,51,2989	0/0:26,0:26:69.19:0,69,3739	1/1:3,25:28:54.19:1976,54,0	0/0:26,0:26:66.20:0,66,3563	0/0:25,0:25:69.24:0,69,4179	1/1:4,12:16:27.09:988,27,0	0/0:19,0:19:54.19:0,54,3169	0/0:24,0:24:72.25:0,72,4015	0/0:44,0:44:99:0,117,6504	0/0:22,0:22:60.21:0,60,3425	0/0:11,0:11:30.10:0,30,1448	0/0:22,0:22:63.22:0,63,3707	0/0:12,0:12:24.08:0,24,1404	0/0:27,0:27:72.25:0,72,4288	0/0:32,0:32:90.31:0,90,5420	0/0:7,0:7:21.07:0,21,1144
chr10	83899890	.	C	CAAAA	4936.61	PASS	AB=0.931;AC=18;AF=0.321;AN=56;BaseQRankSum=4.879;DP=638;FS=11.348;HRun=9;HaplotypeScore=126.1569;InbreedingCoeff=0.8108;MQ=66.07;MQ0=3;MQRankSum=-3.885;QD=22.75;ReadPosRankSum=-6.055;VQSLOD=0.1824;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:32:99:281,0,138	1/1:1,9:13:18.45:306,18,0	0/0:18,0:13:14.98:0,15,219	0/0:19,0:17:19.39:0,19,170	0/0:28,0:28:77.76:0,78,1025	0/0:35,0:35:90.12:0,90,1158	1/1:8,0:10:26.87:279,27,0	0/0:32,0:32:8.30:0,8,609	0/0:26,0:26:57.04:0,57,757	1/1:8,9:23:39.84:533,40,0	1/1:7,19:27:47.95:811,48,0	0/0:17,0:18:43.73:0,44,524	0/0:31,0:31:69.05:0,69,945	0/0:22,0:22:54.02:0,54,668	1/1:17,0:23:65.93:821,66,0	1/1:6,10:17:24.08:507,24,0	1/1:13,19:33:45.11:930,45,0	1/1:6,1:15:20.10:380,20,0	0/0:20,0:20:57.09:0,57,694	0/0:22,0:22:51.06:0,51,671	0/0:13,0:12:30.03:0,30,398	0/0:23,0:23:51.03:0,51,666	0/0:24,0:25:63.02:0,63,748	0/0:24,0:24:59.99:0,60,744	0/0:25,0:25:66.09:0,66,883	0/1:21,0:23:88.35:88,0,106	0/0:33,0:33:84.13:0,84,1146	0/0:5,0:5:8.39:0,8,39
chr10	83899899	.	AG	A	1408.66	PASS	AB=0.952;AC=12;AF=0.214;AN=56;BaseQRankSum=8.473;DP=621;FS=8.661;HRun=1;HaplotypeScore=82.0942;InbreedingCoeff=0.5680;MQ=62.83;MQ0=4;MQRankSum=-1.779;QD=9.65;ReadPosRankSum=-4.171;VQSLOD=-0.6679;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,3:30:16.91:179,0,17	0/1:12,0:12:2.86:3,0,48	0/1:22,0:12:13.79:14,0,238	0/0:19,0:14:26.55:0,27,221	0/0:28,0:28:84.24:0,84,1064	0/0:36,0:36:99:0,101,1260	0/1:8,1:9:74.88:75,0,77	0/0:34,0:34:83.42:0,83,1009	0/0:26,0:26:78.18:0,78,942	0/0:19,0:19:26.52:0,27,327	0/0:23,0:23:30.59:0,31,309	0/0:16,0:17:45.91:0,46,572	0/0:27,0:27:81.22:0,81,1015	0/0:18,0:18:54.14:0,54,681	1/1:24,1:25:38.72:215,39,0	0/0:14,0:13:5.31:0,5,148	0/0:25,1:26:10.02:0,10,234	1/1:16,0:16:27.78:177,28,0	0/0:22,0:22:66.10:0,66,805	0/0:22,0:22:62.86:0,63,745	0/0:12,0:11:33.11:0,33,430	0/0:22,0:22:63.10:0,63,739	0/0:27,0:27:76.57:0,77,915	0/0:22,0:22:63.12:0,63,787	0/0:25,0:25:75.21:0,75,947	1/1:11,13:24:67.14:791,67,0	0/0:36,0:36:99:0,107,1278	1/1:0,8:8:9.03:125,9,0
chr10	83901282	.	T	TCCCTCC	5173.55	PASS	AB=0.972;AC=30;AF=0.536;AN=56;BaseQRankSum=-9.664;DP=437;FS=4.764;HRun=0;HaplotypeScore=247.2772;InbreedingCoeff=-0.4106;MQ=48.23;MQ0=1;MQRankSum=-2.098;QD=12.81;ReadPosRankSum=-9.069;VQSLOD=0.7478;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,1:22:63.12:1270,63,0	0/1:9,0:9:15:15,0,50	0/1:8,0:4:48.79:49,0,102	0/1:8,0:8:46.67:47,0,104	0/0:15,0:15:11.81:0,12,121	0/1:10,0:10:17.31:17,0,86	0/1:28,0:27:73.36:73,0,140	0/1:25,0:25:99:206,0,119	0/1:30,0:30:99:129,0,261	0/1:17,0:17:87.47:87,0,101	0/0:9,0:9:11.78:0,12,70	0/1:18,0:18:99:140,0,156	0/1:13,0:19:34.84:204,0,35	0/1:20,0:25:88.12:330,0,88	1/1:7,0:8:24.04:475,24,0	0/1:14,0:14:22.02:22,0,162	0/1:14,0:14:51.99:52,0,63	1/1:3,0:6:18.06:395,18,0	0/1:21,0:21:44.90:45,0,201	0/1:9,0:9:42.34:76,0,42	0/1:21,0:21:83.77:84,0,97	0/1:9,0:11:23.13:23,0,84	0/0:9,0:9:11.38:0,11,94	0/1:27,0:27:0.46:0,0,144	0/1:17,0:16:58.58:59,0,97	1/1:13,2:16:48.16:951,48,0	0/1:10,0:10:22.24:22,0,68	1/1:9,1:10:19.52:401,20,0
chr10	83901286	.	CG	C	7570.54	PASS	AB=0.833;AC=54;AF=0.964;AN=56;BaseQRankSum=2.683;DP=433;FS=0.000;HRun=1;HaplotypeScore=181.6858;InbreedingCoeff=0.1095;MQ=48.56;MQ0=3;MQRankSum=-2.611;QD=17.48;ReadPosRankSum=3.971;VQSLOD=5.0730;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,17:22:46.24:318,46,0	1/1:1,7:8:23.84:173,24,0	0/1:7,1:4:7.12:7,0,49	0/1:5,2:6:60.02:60,0,67	1/1:0,14:14:35.56:246,36,0	1/1:4,9:13:32.54:232,33,0	1/1:2,25:26:71.92:511,72,0	1/1:1,19:20:51.57:376,52,0	1/1:3,27:30:84.03:612,84,0	1/1:6,13:20:47.30:377,47,0	1/1:1,8:9:21.62:140,22,0	1/1:2,17:19:56.49:403,56,0	1/1:8,13:21:51.84:300,52,0	1/1:8,14:22:38.36:281,38,0	1/1:2,5:7:17.64:114,18,0	1/1:1,14:15:44.24:304,44,0	1/1:4,11:15:31.81:233,32,0	1/1:4,3:7:16.40:108,16,0	1/1:3,17:20:59.25:443,59,0	1/1:0,6:6:17.84:125,18,0	1/1:4,17:21:46.52:346,47,0	1/1:3,9:12:34:219,34,0	1/1:1,9:10:29.72:208,30,0	1/1:1,24:25:61.08:430,61,0	1/1:1,15:15:41.56:284,42,0	1/1:6,12:18:51.67:357,52,0	1/1:2,9:11:29.80:219,30,0	1/1:2,7:8:20.93:143,21,0
chr10	83902021	.	C	CT	669.44	PASS	AB=0.833;AC=17;AF=0.304;AN=56;BaseQRankSum=-2.374;DP=539;FS=1.199;HRun=14;HaplotypeScore=70.9710;InbreedingCoeff=0.2213;MQ=66.36;MQ0=1;MQRankSum=-0.146;QD=2.85;ReadPosRankSum=-0.830;VQSLOD=-0.3462;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:38:39.10:0,39,138	1/1:1,5:6:12:105,12,0	0/0:14,0:11:4.91:0,5,37	0/0:11,0:6:5.54:0,6,29	0/0:23,0:24:21.17:0,21,216	0/0:12,0:12:20.56:0,21,133	0/0:19,1:20:5.98:0,6,165	0/1:29,3:31:0.76:1,0,209	0/0:20,0:21:40.20:0,40,252	1/1:8,7:17:1.47:112,1,0	1/1:8,6:15:8.75:52,9,0	0/1:12,3:15:5.91:6,0,95	0/1:12,6:18:52.53:53,0,89	0/1:14,3:18:44.66:45,0,119	0/0:20,0:21:46.21:0,46,292	1/1:1,11:13:20.15:205,20,0	0/1:9,17:26:2.59:181,0,3	0/0:27,1:32:32.81:0,33,316	0/0:15,0:18:26.62:0,27,152	0/1:12,2:13:25.59:26,0,75	0/1:19,3:22:23.55:24,0,119	0/0:9,0:11:15.72:0,16,88	0/1:21,1:22:22.78:23,0,75	0/0:18,0:21:36.47:0,36,220	0/1:12,3:15:0.35:0,0,114	0/0:25,1:28:21.72:0,22,244	0/0:14,1:15:4.01:0,4,146	0/0:15,0:15:44.34:0,44,288
chr10	83902565	.	C	CT	3223.52	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-11.869;DP=729;FS=0.899;HRun=3;HaplotypeScore=71.0922;InbreedingCoeff=0.9885;MQ=87.09;MQ0=0;MQRankSum=-3.313;QD=35.42;ReadPosRankSum=1.764;VQSLOD=4.3297;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,49:53:99:1932,138,0	0/0:9,0:9:27.04:0,27,297	0/0:27,0:27:63.19:0,63,752	0/0:28,0:28:68.96:0,69,804	0/0:23,0:23:63.18:0,63,740	0/0:26,0:26:72.20:0,72,851	0/0:23,0:23:69.18:0,69,799	0/0:29,0:29:84.25:0,84,998	0/0:31,0:31:93.29:0,93,1115	0/0:26,0:26:75.22:0,75,892	0/0:17,0:17:51.14:0,51,598	0/0:26,0:26:72.22:0,72,858	0/0:21,0:21:60.18:0,60,720	0/0:27,0:27:81.22:0,81,948	0/0:34,0:34:99:0,99,1163	0/0:31,0:30:87.25:0,87,1032	0/0:30,0:30:81.25:0,81,972	0/0:25,0:25:69.16:0,69,799	0/0:26,0:26:66.19:0,66,782	0/0:12,0:12:36.11:0,36,431	0/0:39,0:39:99:0,117,1380	0/0:21,0:21:57.17:0,57,683	0/0:19,0:19:54.17:0,54,646	0/0:35,0:35:99:0,105,1259	0/0:24,0:24:63.19:0,63,756	1/1:3,31:34:60.31:1263,60,0	0/0:29,0:29:84.23:0,84,985	1/1:0,4:4:12.04:168,12,0
chr10	83903551	.	T	TC	2479.49	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-7.311;DP=468;FS=2.734;HRun=8;HaplotypeScore=52.0953;InbreedingCoeff=0.9538;MQ=70.15;MQ0=0;MQRankSum=-0.185;QD=21.94;ReadPosRankSum=-1.531;VQSLOD=3.3531;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,28:34:44.63:769,45,0	1/1:0,2:2:3.01:35,3,0	0/0:23,0:19:34.80:0,35,270	0/0:15,0:14:23.76:0,24,197	0/0:23,0:23:60.01:0,60,544	0/0:24,0:24:66.02:0,66,599	0/0:19,1:20:34.17:0,34,442	0/0:15,0:15:29.99:0,30,274	0/0:15,0:15:35.60:0,36,312	1/1:0,9:9:24.06:268,24,0	1/1:2,4:6:8.94:86,9,0	0/0:20,0:20:59.93:0,60,538	0/0:7,0:7:18:0,18,165	0/0:15,0:15:26.10:0,26,292	0/0:21,0:21:51.02:0,51,466	1/1:3,14:18:17.72:457,18,0	1/1:3,20:23:51.15:589,51,0	0/0:22,0:22:56.94:0,57,506	0/0:11,0:11:30.01:0,30,271	0/0:14,0:14:32.89:0,33,286	0/0:39,0:39:99:0,102,933	0/0:12,0:12:24:0,24,219	0/0:11,0:11:32.99:0,33,291	0/0:19,0:19:51.02:0,51,467	0/0:16,0:17:38.04:0,38,332	1/1:2,9:11:24.06:268,24,0	0/0:12,0:12:26.98:0,27,237	1/1:2,8:10:18.05:208,18,0
chr10	83904154	.	A	AAAAG	281.90	PASS	AB=1.000;AC=5;AF=0.093;AN=54;BaseQRankSum=-0.670;DP=461;FS=8.185;HRun=0;HaplotypeScore=87.3952;InbreedingCoeff=0.3024;MQ=48.33;MQ0=18;MQRankSum=-1.918;QD=3.71;ReadPosRankSum=2.254;VQSLOD=0.9347;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:23:5.20:5,0,20	0/0:9,0:9:17.37:0,17,156	./.	0/0:17,0:3:2.99:0,3,24	0/0:28,0:27:28.20:0,28,412	0/0:14,0:14:30.04:0,30,340	0/0:23,0:22:13.71:0,14,119	0/0:24,0:23:31.75:0,32,429	0/0:13,0:13:20.62:0,21,181	0/0:17,0:16:28.40:0,28,238	0/0:25,0:25:44.93:0,45,384	0/0:19,0:17:35.95:0,36,345	0/0:17,0:17:41.41:0,41,373	0/0:8,0:8:18.02:0,18,200	0/1:15,0:15:13.44:13,0,83	0/0:12,0:10:18.16:0,18,161	0/0:26,0:24:42.83:0,43,323	0/0:20,0:18:10.99:0,11,116	0/1:12,0:11:3.08:3,0,105	0/0:6,0:6:12:0,12,106	0/0:8,0:7:15:0,15,150	0/0:8,0:8:18.02:0,18,202	0/0:8,0:8:11.93:0,12,117	0/0:25,0:25:35.09:0,35,637	1/1:3,16:22:18.03:367,18,0	0/0:21,0:20:37.66:0,38,280	0/0:31,0:29:42:0,42,611	0/0:3,0:3:3.82:0,4,24
chr10	83904155	.	AAAAG	A	1624.61	PASS	AC=22;AF=0.407;AN=54;BaseQRankSum=5.907;DP=458;FS=7.155;HRun=0;HaplotypeScore=75.0608;InbreedingCoeff=0.8814;MQ=48.32;MQ0=18;MQRankSum=-4.648;QD=8.16;ReadPosRankSum=-2.984;VQSLOD=0.1509;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:23:8.59:59,9,0	1/1:8,1:9:12.30:175,12,0	./.	0/0:17,0:3:5.74:0,6,31	0/0:28,0:27:28.77:0,29,564	0/0:13,0:13:29.88:0,30,398	1/1:21,0:22:17.76:143,18,0	0/0:24,0:23:52.26:0,52,538	0/0:14,0:14:26.79:0,27,443	1/1:17,0:16:15.27:214,15,0	1/1:25,1:26:18.63:245,19,0	0/0:18,0:16:32.82:0,33,436	0/0:17,0:17:38.84:0,39,541	0/0:6,0:6:17.95:0,18,264	1/1:14,0:14:2.36:89,2,0	1/1:11,1:10:15.19:140,15,0	1/1:26,1:25:37.43:349,37,0	1/1:21,0:18:5.76:159,6,0	0/0:13,0:12:20.18:0,20,217	0/0:6,0:6:14.93:0,15,191	0/0:8,0:7:11.87:0,12,197	0/0:8,0:8:17.75:0,18,236	0/0:7,0:7:11.85:0,12,122	0/0:25,0:25:34.35:0,34,760	0/0:23,0:22:21.04:0,21,322	1/1:21,0:20:30.28:241,30,0	0/0:31,0:29:72.63:0,73,1054	1/1:3,0:3:4.30:16,4,0
chr10	83904156	.	AAAGAAAAG	A	1496.32	PASS	AB=0.948;AC=14;AF=0.259;AN=54;BaseQRankSum=2.757;DP=465;FS=9.624;HRun=0;HaplotypeScore=107.4069;InbreedingCoeff=0.3817;MQ=48.60;MQ0=18;MQRankSum=-4.769;QD=7.96;ReadPosRankSum=-4.416;VQSLOD=-0.3887;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:23:8.99:105,9,0	0/1:8,0:9:6.55:7,0,170	./.	0/0:17,0:3:6.01:0,6,67	0/0:28,0:27:34.20:0,34,1198	0/0:13,0:13:30.02:0,30,879	1/1:3,19:22:17.95:330,18,0	0/0:25,0:24:56.27:0,56,1110	0/0:15,0:15:29.83:0,30,863	0/0:6,0:15:6.27:0,6,153	0/1:25,0:26:48.90:49,0,478	0/0:18,0:16:32.98:0,33,909	0/0:17,0:17:39.35:0,39,1092	0/0:7,0:7:21.05:0,21,574	0/1:14,0:14:26.84:62,0,27	0/1:11,0:10:15.65:16,0,175	0/1:25,0:26:90.77:91,0,329	0/1:22,0:19:13.52:270,0,14	0/0:13,0:12:24.33:0,24,477	0/0:6,0:6:14.99:0,15,365	0/0:7,0:7:11.87:0,12,344	0/0:8,0:8:17.74:0,18,394	0/0:7,0:7:11.87:0,12,244	0/0:25,0:25:49.68:0,50,1508	0/0:23,0:22:21.07:0,21,637	1/1:22,0:21:35.61:525,36,0	0/0:31,0:29:72.93:0,73,2017	1/1:6,0:6:15.04:213,15,0
chr10	83904158	.	AG	A	2343.14	PASS	AC=22;AF=0.407;AN=54;BaseQRankSum=7.951;DP=456;FS=3.816;HRun=1;HaplotypeScore=53.0955;InbreedingCoeff=0.9039;MQ=48.77;MQ0=18;MQRankSum=-3.979;QD=11.77;ReadPosRankSum=-3.493;VQSLOD=0.6194;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,2:23:8.95:73,9,0	1/1:8,1:9:23.78:181,24,0	./.	0/0:18,0:4:8.75:0,9,73	0/0:27,0:26:28.77:0,29,324	0/0:12,0:12:29.34:0,29,232	1/1:22,0:22:16.56:89,17,0	0/0:24,0:23:53.19:0,53,506	0/0:16,0:16:36.01:0,36,282	1/1:14,1:14:2.01:208,2,0	1/1:23,2:25:64.75:517,65,0	0/0:18,0:16:36.76:0,37,297	0/0:16,0:16:29.41:0,29,269	0/0:8,0:8:23.79:0,24,177	1/1:11,2:14:29.76:246,30,0	1/1:11,1:10:1.55:92,2,0	1/1:25,2:25:39.51:391,40,0	1/1:18,2:18:42.68:335,43,0	0/0:12,0:11:23.16:0,23,162	0/0:5,0:5:14.99:0,15,135	0/0:5,0:5:12.03:0,12,128	0/0:8,0:8:17.96:0,18,194	0/0:8,0:8:17.63:0,18,142	0/0:25,0:25:34.78:0,35,360	0/0:24,0:23:17.78:0,18,141	1/1:22,0:20:34.84:303,35,0	0/0:30,0:28:51.60:0,52,550	1/1:6,0:6:14.87:118,15,0
chr10	83904162	.	AAG	A	572.74	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=8.148;DP=479;FS=10.490;HRun=0;HaplotypeScore=66.0404;InbreedingCoeff=0.7198;MQ=50.20;MQ0=19;MQRankSum=-4.541;QD=5.21;ReadPosRankSum=-0.392;VQSLOD=1.4612;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:23:0.80:31,1,0	0/0:9,0:9:8.96:0,9,117	0/0:4,0:2:2.68:0,3,11	0/0:26,0:7:12.01:0,12,156	0/0:28,0:27:58.50:0,59,945	0/0:11,0:11:27.09:0,27,475	1/1:22,0:22:7.24:66,7,0	0/0:31,0:30:77.86:0,78,1218	0/0:16,0:16:42.06:0,42,675	0/0:15,0:14:25.82:0,26,160	0/0:24,1:25:20.56:0,21,288	0/0:19,0:17:39.10:0,39,618	0/0:18,0:18:51.10:0,51,804	0/0:8,0:8:24.08:0,24,416	1/1:14,0:14:10.68:104,11,0	0/0:11,1:10:22.20:0,22,183	0/0:24,2:25:28.97:0,29,319	1/1:22,0:19:20.31:243,20,0	0/0:12,0:11:29.93:0,30,463	0/0:6,0:6:18.05:0,18,289	0/0:6,0:5:12.04:0,12,210	0/0:7,0:7:17.91:0,18,272	0/0:8,0:8:21.03:0,21,335	0/0:25,0:25:53.71:0,54,905	0/0:28,0:27:39.10:0,39,572	0/1:22,0:20:27.05:207,0,27	0/0:29,0:27:75.18:0,75,1206	1/1:4,0:4:8.11:77,8,0
chr10	83905196	.	T	TAA	899.53	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.815;DP=521;FS=2.336;HRun=2;HaplotypeScore=65.6303;InbreedingCoeff=0.9159;MQ=78.40;MQ0=0;MQRankSum=-2.300;QD=42.83;ReadPosRankSum=-2.048;VQSLOD=3.1447;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1565	0/0:4,0:4:12.04:0,12,177	0/0:13,0:13:33.10:0,33,449	0/0:19,0:18:42.13:0,42,590	0/0:26,0:26:75.21:0,75,1062	0/0:12,0:12:36.12:0,36,530	1/1:3,18:21:57.11:994,57,0	0/0:40,0:40:99:0,114,1591	0/0:15,0:15:45.15:0,45,662	0/0:17,0:17:45.13:0,45,642	0/0:22,0:22:57.19:0,57,835	0/0:9,0:9:27.09:0,27,397	0/0:12,0:12:33.10:0,33,465	0/0:10,0:10:30.08:0,30,421	0/0:17,0:17:51.16:0,51,732	0/0:22,0:22:60.19:0,60,864	0/0:21,0:21:60.20:0,60,883	0/0:14,0:14:39.13:0,39,574	0/0:20,0:20:57.19:0,57,834	0/0:24,0:24:69.22:0,69,997	0/0:32,0:32:96.29:0,96,1385	0/0:20,0:20:54.18:0,54,795	0/0:24,0:24:72.24:0,72,1057	0/0:10,0:10:30.10:0,30,442	0/0:18,0:18:42.14:0,42,617	0/0:17,0:17:48.15:0,48,689	0/0:21,0:21:54.05:0,54,703	0/0:3,0:3:9.01:0,9,112
chr10	83905355	.	A	ATG	1333.13	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.372;DP=611;FS=8.391;HRun=0;HaplotypeScore=82.8807;InbreedingCoeff=0.8619;MQ=59.88;MQ0=3;MQRankSum=-0.321;QD=17.09;ReadPosRankSum=2.771;VQSLOD=3.3358;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,33:49:90.24:1409,90,0	0/0:6,0:5:9.03:0,9,105	0/0:30,0:20:17.27:0,17,239	0/0:37,0:21:35.68:0,36,379	0/0:16,0:18:50.82:0,51,566	0/0:17,0:17:51.16:0,51,612	1/1:29,0:28:3.01:33,3,0	0/0:43,0:43:81.07:0,81,938	0/0:19,0:19:36.11:0,36,431	0/0:25,0:25:54.16:0,54,638	0/0:12,0:12:33.10:0,33,384	0/0:19,0:19:48.13:0,48,564	0/0:14,0:14:30.09:0,30,360	0/0:14,0:15:41.96:0,42,481	0/0:23,0:23:39.12:0,39,463	0/0:20,0:20:32.84:0,33,371	0/0:28,0:28:66.15:0,66,760	0/0:23,0:23:53.93:0,54,636	0/0:22,0:22:42.12:0,42,493	0/0:20,0:20:45.14:0,45,540	0/0:24,0:24:54.06:0,54,604	0/0:14,0:14:30.09:0,30,359	0/0:11,0:11:27.08:0,27,324	0/0:27,0:27:54.14:0,54,634	0/0:8,0:7:18.05:0,18,212	0/0:24,0:23:57.17:0,57,684	0/0:26,0:25:57.17:0,57,683	0/0:7,0:8:20.90:0,21,230
chr10	83905519	.	AAAAAAAC	A	1320.21	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.805;DP=641;FS=8.782;HRun=0;HaplotypeScore=155.1579;InbreedingCoeff=0.9255;MQ=64.87;MQ0=1;MQRankSum=-6.744;QD=19.13;ReadPosRankSum=0.615;VQSLOD=2.7080;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:93.32:0,93,3324	1/1:4,5:9:9.03:184,9,0	0/0:15,0:10:18.06:0,18,442	0/0:20,0:20:25.44:0,25,630	0/0:29,0:29:48.16:0,48,1758	0/0:19,0:19:45.15:0,45,1606	0/0:25,0:25:60.21:0,60,2198	0/0:32,0:32:69.23:0,69,2293	0/0:21,0:21:57.20:0,57,2031	1/1:7,10:17:27.09:601,27,0	1/1:7,13:20:21.07:469,21,0	0/0:32,0:32:69.24:0,69,2439	0/0:18,0:18:42.14:0,42,1503	0/0:29,0:29:72.20:0,72,2533	0/0:26,0:26:54.19:0,54,1939	1/1:8,1:9:3:69,3,0	1/1:9,5:14:8.98:157,9,0	0/0:31,0:31:75.26:0,75,2658	0/0:26,0:26:54.17:0,54,1902	0/0:21,0:21:42.14:0,42,1449	0/0:26,0:26:63.18:0,63,2211	0/0:36,0:36:93.31:0,93,3205	0/0:19,0:19:42.10:0,42,1442	0/0:29,0:29:60.21:0,60,2213	0/0:24,0:24:69.24:0,69,2441	0/0:24,0:24:69.24:0,69,2435	0/0:17,0:17:42.14:0,42,1554	0/0:14,0:14:39.13:0,39,1442
chr10	83905598	.	AGT	A	2358.76	PASS	AB=0.830;AC=23;AF=0.411;AN=56;BaseQRankSum=9.383;DP=919;FS=5.324;HRun=0;HaplotypeScore=182.7908;InbreedingCoeff=0.4831;MQ=54.26;MQ0=10;MQRankSum=-2.641;QD=5.54;ReadPosRankSum=2.089;VQSLOD=2.7482;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,24:39:38.32:460,38,0	1/1:4,0:8:2.42:14,2,0	0/0:46,0:27:22.13:0,22,208	0/0:41,0:24:38.91:0,39,492	0/0:19,0:19:48.15:0,48,724	0/1:28,2:28:39.63:40,0,824	0/0:28,0:26:1.28:0,1,39	0/0:24,0:24:26.37:0,26,661	0/0:46,1:46:24.84:0,25,1166	1/1:10,0:26:33.94:237,34,0	1/1:6,0:15:5.49:28,5,0	0/0:48,0:48:96.71:0,97,1596	0/1:33,2:34:35.92:36,0,777	0/0:44,1:45:43.52:0,44,1234	1/1:37,2:37:18.56:162,19,0	0/1:6,0:18:8.06:8,0,42	0/1:8,0:11:3.19:31,0,3	1/1:16,2:16:13.18:164,13,0	0/0:22,1:22:0.41:0,0,418	0/0:26,0:26:69.16:0,69,998	0/1:90,5:90:36.84:37,0,1908	0/0:30,1:28:60.15:0,60,869	0/0:22,2:24:6.89:0,7,639	0/0:60,3:61:31.84:0,32,1755	1/1:21,8:29:3.17:496,3,0	1/1:21,12:31:54.81:592,55,0	0/0:23,0:22:1.03:0,1,453	1/1:7,10:16:14.20:245,14,0
chr10	83905646	.	GTT	G	1177	PASS	AB=0.905;AC=12;AF=0.214;AN=56;BaseQRankSum=10.362;DP=937;FS=0.494;HRun=3;HaplotypeScore=195.7907;InbreedingCoeff=0.4408;MQ=49.23;MQ0=21;MQRankSum=-7.924;QD=6.73;ReadPosRankSum=0.596;VQSLOD=-0.0347;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,2:22:24.92:25,0,130	1/1:2,10:10:4.45:58,4,0	0/0:43,1:14:16.53:0,17,500	0/0:38,0:9:23.97:0,24,362	0/0:23,0:23:64.10:0,64,979	0/0:26,2:25:60.30:0,60,835	0/0:32,1:28:4.51:0,5,19	0/0:37,0:34:98.41:0,98,855	0/0:44,3:42:73.75:0,74,1501	1/1:8,29:33:77.29:1067,77,0	0/0:2,13:15:0.78:0,1,3	0/0:41,1:42:99:0,106,1746	0/0:34,1:34:72.56:0,73,1312	0/0:45,4:47:76.40:0,76,1662	0/1:28,4:27:1.35:1,0,57	1/1:7,15:21:2.37:35,2,0	1/1:8,4:10:2.71:39,3,0	0/1:15,0:13:19.66:48,0,20	0/0:21,0:18:22.81:0,23,330	0/0:19,0:19:33.90:0,34,363	0/0:121,6:107:99:0,163,1344	0/0:32,0:29:80.28:0,80,1378	0/0:19,0:18:48.51:0,49,779	0/0:75,1:72:99:0,181,3081	0/1:17,1:18:43.68:52,0,44	0/0:33,2:30:27.32:0,27,1055	0/0:21,0:20:40.11:0,40,293	0/0:16,0:15:31.78:0,32,499
chr10	83905650	.	ATG	A	4536	PASS	AB=0.806;AC=21;AF=0.375;AN=56;BaseQRankSum=6.829;DP=925;FS=8.383;HRun=0;HaplotypeScore=177.5476;InbreedingCoeff=0.5963;MQ=49.18;MQ0=21;MQRankSum=-1.600;QD=11.04;ReadPosRankSum=1.482;VQSLOD=3.7656;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:23:4.07:0,4,12	1/1:5,6:10:2.59:27,3,0	0/0:46,0:15:23.47:0,23,285	0/0:40,0:9:14.76:0,15,182	0/0:24,0:24:51.14:0,51,776	0/1:27,1:24:20.55:21,0,430	0/0:33,0:29:6.02:0,6,71	1/1:9,27:33:78.06:887,78,0	0/0:45,1:41:31.93:0,32,910	1/1:14,20:32:46.51:566,47,0	0/1:3,10:14:0:0,0,0	0/0:42,0:42:85.88:0,86,1322	0/0:35,0:34:71.40:0,71,1028	0/0:49,0:47:85.56:0,86,1298	0/1:29,1:24:0.01:0,0,0	0/1:13,9:21:0.01:0,0,1	0/1:9,3:10:0.23:24,0,0	0/1:18,0:15:13.20:13,0,70	0/1:10,13:19:28.26:306,0,28	1/1:12,5:17:33.07:380,33,0	1/1:52,73:105:99:1635,132,0	0/0:35,0:32:78.18:0,78,1134	0/0:19,0:18:39.11:0,39,591	0/0:68,1:66:99:0,144,2143	1/1:9,9:18:26.92:306,27,0	0/0:34,0:29:74.01:0,74,996	1/1:6,14:19:30.09:372,30,0	0/0:13,0:12:20.10:0,20,301
chr10	83905665	.	T	TGC	35.36	PASS	AB=1.000;AC=5;AF=0.093;AN=54;BaseQRankSum=4.360;DP=877;FS=1.314;HRun=0;HaplotypeScore=180.2155;InbreedingCoeff=0.4695;MQ=49.50;MQ0=20;MQRankSum=-0.265;QD=0.41;ReadPosRankSum=-2.749;VQSLOD=2.4506;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:19:0.76:1,0,20	0/1:12,0:11:3.78:6,0,4	0/0:52,0:17:17.41:0,17,192	0/0:38,0:7:11.66:0,12,133	0/0:22,0:22:53.39:0,53,655	0/0:25,0:21:42.05:0,42,482	1/1:32,4:33:8.67:116,9,0	0/0:32,0:31:74.67:0,75,578	0/0:42,0:37:77.88:0,78,852	0/0:30,0:27:69.61:0,70,554	./.	0/0:42,0:42:96.82:0,97,1122	0/0:30,0:29:61.28:0,61,738	0/0:46,0:44:89.76:0,90,1078	0/0:29,0:23:0:0,0,0	0/1:18,0:17:5.94:6,0,12	0/0:9,0:7:5.84:0,6,41	0/0:15,0:12:13.96:0,14,95	0/0:26,0:23:50.85:0,51,423	0/0:17,0:17:37.40:0,37,283	0/0:115,0:100:99:0,159,1211	0/0:35,0:33:86.75:0,87,991	0/0:17,0:17:42.04:0,42,508	0/0:69,0:66:99:0,144,1711	0/0:15,0:15:23.88:0,24,182	0/0:33,0:31:75:0,75,825	0/0:20,0:19:38.74:0,39,287	0/0:15,0:15:32.85:0,33,335
chr10	83905666	.	GCGCGC	G	88.27	PASS	AB=0.832;AC=6;AF=0.107;AN=56;BaseQRankSum=5.813;DP=841;FS=25.920;HRun=0;HaplotypeScore=195.2229;InbreedingCoeff=0.1294;MQ=50.22;MQ0=20;MQRankSum=-6.005;QD=0.93;ReadPosRankSum=-2.513;VQSLOD=0.9194;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,3:17:23.76:24,0,92	0/0:12,0:11:8.14:0,8,63	0/0:53,0:17:45.07:0,45,1019	0/0:40,0:9:19.16:0,19,516	0/0:22,0:22:56.72:0,57,1840	0/0:21,2:21:18.68:0,19,1302	0/0:33,0:31:5.31:0,5,155	0/0:32,0:31:81.28:0,81,1709	0/0:36,2:33:18.82:0,19,2430	0/0:29,0:27:74.92:0,75,1044	0/0:16,0:16:0:0,0,0	0/0:39,2:41:99:0,102,3290	0/0:26,1:26:24.60:0,25,2143	0/0:44,1:44:32.21:0,32,2967	1/1:20,4:22:1.55:5,2,0	0/0:14,3:17:5.96:0,6,106	0/1:7,1:7:50.01:61,0,50	0/1:9,2:10:65.52:66,0,267	0/0:26,0:23:55.37:0,55,1300	0/0:17,0:17:42.08:0,42,792	0/0:98,7:96:99:0,138,3442	0/0:34,1:33:89.83:0,90,2826	0/0:17,0:17:45.15:0,45,1440	0/0:64,2:63:99:0,165,5134	0/0:12,0:12:27.09:0,27,538	0/1:27,2:30:44.45:44,0,2104	0/0:19,1:19:39.13:0,39,826	0/0:14,0:15:33.09:0,33,996
chr10	83905685	.	A	ATG	1264.24	PASS	AB=0.966;AC=8;AF=0.143;AN=56;BaseQRankSum=3.687;DP=1089;FS=7.950;HRun=0;HaplotypeScore=177.4199;InbreedingCoeff=0.2680;MQ=42.23;MQ0=109;MQRankSum=-4.647;QD=5.00;ReadPosRankSum=-0.516;VQSLOD=2.4956;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:24:5.23:0,5,45	0/0:12,0:9:2.22:0,2,7	0/0:36,0:9:17.72:0,18,178	0/0:34,0:5:10.16:0,10,107	0/0:32,0:29:62:0,62,810	0/0:31,0:26:36.12:0,36,456	0/0:33,2:26:0:0,0,0	0/0:62,0:34:69.06:0,69,769	0/0:49,1:39:52.50:0,53,782	0/1:52,0:41:47.41:47,0,224	0/1:20,0:17:0:0,0,0	0/0:49,0:45:97.44:0,97,1153	0/0:37,0:31:69.18:0,69,842	0/0:51,0:44:68.69:0,69,907	0/1:44,0:35:1.55:2,0,5	0/1:37,0:27:17.67:18,0,23	0/0:14,0:14:11.34:0,11,84	0/1:23,0:17:23:23,0,73	0/0:28,0:21:32.46:0,32,376	0/0:21,0:21:56.62:0,57,682	0/0:135,0:108:99:0,159,2219	0/0:41,0:33:87.28:0,87,1102	0/0:22,0:19:39.11:0,39,479	0/0:61,0:56:99:0,112,1359	0/0:26,0:21:33.08:0,33,393	0/1:38,13:36:28.24:798,0,28	0/0:22,0:18:36.12:0,36,457	1/1:14,9:21:33.03:504,33,0
chr10	83905727	.	GTA	G	181.96	PASS	AB=0.966;AC=7;AF=0.135;AN=52;BaseQRankSum=9.152;DP=1555;FS=1.456;HRun=0;HaplotypeScore=212.4109;InbreedingCoeff=0.1108;MQ=34.21;MQ0=336;MQRankSum=-8.323;QD=0.59;ReadPosRankSum=-1.014;VQSLOD=2.7507;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:53,4:40:1.61:2,0,25	1/1:24,1:12:0.89:2,1,0	./.	./.	0/0:42,0:33:75.05:0,75,1258	0/0:46,0:27:34:0,34,526	0/0:70,0:33:5.68:0,6,29	0/0:81,0:39:99:0,104,1216	0/0:73,0:57:87.90:0,88,1507	0/1:88,4:36:99:222,0,287	0/0:25,1:20:0:0,0,0	0/0:76,0:64:99:0,119,2271	0/0:61,0:44:87.62:0,88,1497	0/0:74,0:52:77.42:0,77,1331	0/0:75,0:51:5.62:0,6,31	0/1:54,4:30:8.87:9,0,103	0/1:31,0:27:0.52:1,0,184	0/1:41,0:26:43.38:43,0,174	0/0:36,0:18:31.87:0,32,513	0/0:46,0:36:81.23:0,81,1422	0/0:162,0:104:99:0,144,2716	0/0:66,0:48:99:0,99,1598	0/0:33,0:25:42.69:0,43,800	0/0:83,0:70:99:0,128,2091	0/0:48,0:28:24:0,24,346	0/0:80,2:45:81.71:0,82,1159	0/0:33,0:21:47.05:0,47,724	0/0:34,0:25:22.26:0,22,352
chr10	83905729	.	A	ATG	759.94	PASS	AB=0.988;AC=10;AF=0.192;AN=52;BaseQRankSum=9.827;DP=1561;FS=0.000;HRun=0;HaplotypeScore=213.5631;InbreedingCoeff=0.0700;MQ=34.33;MQ0=336;MQRankSum=-9.288;QD=1.62;ReadPosRankSum=-1.058;VQSLOD=2.2625;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:58,0:40:1.55:45,0,2	1/1:23,0:12:2.22:7,2,0	./.	./.	0/0:42,0:33:63.17:0,63,781	0/0:46,0:28:29.53:0,30,372	0/0:68,0:30:3.84:0,4,21	0/0:77,0:39:64.81:0,65,813	0/0:75,0:59:77.59:0,78,1066	0/1:89,0:35:42.33:42,0,196	0/1:25,0:21:0.03:0,0,0	0/0:77,0:65:99:0,125,1580	0/0:63,0:46:87.21:0,87,1047	0/0:75,0:54:72.12:0,72,892	0/1:74,4:51:10.90:11,0,24	0/0:55,0:29:6.02:0,6,77	0/1:34,0:29:73.42:147,0,73	0/1:40,1:26:99:115,0,150	0/0:35,0:17:29.75:0,30,336	0/0:47,0:35:71.76:0,72,852	0/0:165,0:106:99:0,150,1870	0/0:63,0:45:78.23:0,78,988	0/0:34,0:26:47.94:0,48,575	0/0:83,0:71:99:0,110,1366	0/0:47,0:27:17.95:0,18,213	0/1:79,2:45:99:369,0,542	0/0:34,0:22:37.95:0,38,509	0/1:34,0:25:99:153,0,130
chr10	83905733	.	G	GTGTA	242.89	PASS	AB=0.976;AC=7;AF=0.135;AN=52;BaseQRankSum=8.625;DP=1568;FS=0.757;HRun=0;HaplotypeScore=240.6436;InbreedingCoeff=0.2434;MQ=34.36;MQ0=337;MQRankSum=-7.714;QD=0.84;ReadPosRankSum=-3.826;VQSLOD=1.7582;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:63,0:44:1.21:1,0,3	1/1:23,0:10:2.92:17,3,0	./.	./.	0/0:39,0:30:63.22:0,63,1171	0/0:47,0:28:36.57:0,37,637	0/0:67,0:29:4.81:0,5,23	0/0:78,0:37:66.76:0,67,1268	0/0:77,0:61:95.31:0,95,1724	0/1:86,1:32:99:155,0,394	0/1:26,1:20:0.11:0,0,0	0/0:80,0:68:99:0,141,2474	0/0:65,0:48:99:0,100,1690	0/0:78,0:56:87.19:0,87,1445	0/0:78,0:51:5.38:0,5,45	0/1:55,1:28:37.38:37,0,84	0/1:32,2:29:99:141,0,144	0/0:43,0:27:18.05:0,18,294	0/0:30,0:13:30.10:0,30,514	0/0:49,0:37:81.26:0,81,1427	0/0:170,0:108:99:0,165,2920	0/0:63,0:45:83.31:0,83,1511	0/0:35,0:27:47.99:0,48,857	0/0:81,0:69:99:0,121,2133	0/0:47,0:27:17.93:0,18,339	0/0:81,0:45:64.25:0,64,971	0/0:36,0:24:50.87:0,51,840	0/0:31,0:23:26.81:0,27,287
chr10	83905735	.	G	GTA	173.25	PASS	AB=1.000;AC=9;AF=0.173;AN=52;BaseQRankSum=9.541;DP=1568;FS=0.599;HRun=0;HaplotypeScore=211.7425;InbreedingCoeff=0.0472;MQ=34.33;MQ0=339;MQRankSum=-8.188;QD=0.44;ReadPosRankSum=-0.768;VQSLOD=2.6936;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:64,0:45:15.38:20,0,15	1/1:23,0:10:2.96:19,3,0	./.	./.	0/0:39,0:30:63.21:0,63,958	0/0:47,0:28:38.52:0,39,531	0/0:69,0:29:5.06:0,5,23	0/0:73,0:33:80.06:0,80,1117	0/0:77,1:62:83.44:0,83,1388	0/1:87,0:32:30.02:30,0,244	0/1:28,0:20:0:0,0,0	0/0:81,0:69:99:0,143,2049	0/0:65,0:48:99:0,100,1407	0/0:78,0:56:87.12:0,87,1212	0/0:79,0:52:3.48:0,3,36	0/0:54,0:27:7.69:0,8,76	0/1:34,0:29:78.82:86,0,79	0/1:43,0:27:37.50:38,0,156	0/0:29,0:12:30.10:0,30,440	0/0:50,0:38:83.31:0,83,1119	0/0:171,0:109:99:0,175,2446	0/0:61,2:45:86.29:0,86,1262	0/0:36,0:27:51.63:0,52,746	0/0:79,1:68:99:0,120,1756	0/0:47,0:27:17.98:0,18,268	0/1:82,0:45:71.68:72,0,811	0/0:36,0:24:46.95:0,47,701	0/1:30,0:22:36.80:37,0,190
chr10	83905739	.	GTA	G	602.38	PASS	AB=0.944;AC=10;AF=0.192;AN=52;BaseQRankSum=11.156;DP=1558;FS=6.188;HRun=0;HaplotypeScore=207.0115;InbreedingCoeff=0.1315;MQ=34.15;MQ0=341;MQRankSum=-10.116;QD=1.44;ReadPosRankSum=-2.092;VQSLOD=1.8362;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:52,10:44:1.81:5,2,0	1/1:23,0:10:2.60:10,3,0	./.	./.	0/0:40,0:31:65.91:0,66,1082	0/0:46,0:27:31.17:0,31,591	0/0:66,0:26:0.36:0,0,2	0/0:73,0:31:77.99:0,78,1148	0/0:77,0:63:99:0,100,1620	0/1:90,0:33:99:304,0,248	0/0:29,0:21:0.47:0,0,1	0/0:79,0:68:99:0,131,2417	0/0:64,1:48:98.83:0,99,1593	0/0:75,0:55:83.57:0,84,1397	0/0:73,4:50:5.67:0,6,32	0/1:54,0:26:8.88:9,0,100	0/1:34,0:30:52.34:52,0,189	0/1:42,1:27:14.48:14,0,245	0/0:31,0:12:30.02:0,30,442	0/0:52,0:40:87.22:0,87,1513	0/0:169,0:108:99:0,175,2924	0/0:59,0:43:87.91:0,88,1391	0/0:37,0:28:41.94:0,42,848	0/0:78,0:66:99:0,114,2034	0/0:43,4:27:18.04:0,18,300	0/1:71,9:43:99:212,0,724	0/0:34,0:23:53.12:0,53,853	0/1:22,8:22:99:122,0,192
chr10	83905741	.	ATG	A	224.66	PASS	AB=0.995;AC=8;AF=0.154;AN=52;BaseQRankSum=9.845;DP=1559;FS=1.352;HRun=0;HaplotypeScore=208.9419;InbreedingCoeff=0.1367;MQ=34.23;MQ0=336;MQRankSum=-9.482;QD=0.60;ReadPosRankSum=-1.543;VQSLOD=2.6383;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:45:2.71:0,3,16	1/1:23,0:10:2.98:21,3,0	./.	./.	0/0:40,0:31:57.19:0,57,958	0/0:45,0:26:31.17:0,31,549	0/1:66,0:26:0.17:0,0,0	0/0:72,0:29:72.14:0,72,1089	0/0:79,0:64:91.08:0,91,1503	0/1:86,1:32:99:115,0,318	0/0:26,2:20:0:0,0,0	0/0:80,0:68:99:0,129,2157	0/0:66,0:49:90.24:0,90,1439	0/0:75,0:55:75.26:0,75,1275	0/0:75,0:49:5.94:0,6,51	0/1:52,1:26:12.70:13,0,94	0/1:37,0:32:17.62:18,0,204	0/0:43,0:27:15.38:0,15,280	0/0:29,0:12:24.08:0,24,397	0/0:53,0:41:87.26:0,87,1393	0/0:169,0:109:99:0,167,2755	0/0:60,0:44:75.24:0,75,1223	0/0:36,0:27:47.80:0,48,772	0/0:82,0:70:99:0,111,1828	0/0:48,0:28:18.06:0,18,274	0/1:79,0:43:99:147,0,683	0/0:34,0:22:50.20:0,50,806	0/1:30,0:22:32.16:32,0,176
chr10	83905749	.	GTA	G	632.47	PASS	AB=0.910;AC=11;AF=0.212;AN=52;BaseQRankSum=10.852;DP=1560;FS=4.585;HRun=0;HaplotypeScore=208.7602;InbreedingCoeff=0.1961;MQ=33.92;MQ0=338;MQRankSum=-9.167;QD=1.37;ReadPosRankSum=-3.296;VQSLOD=2.0697;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:55,9:45:3.05:8,3,0	1/1:23,0:10:2.60:10,3,0	./.	./.	0/0:39,0:31:63.15:0,63,1062	0/0:46,0:28:37.07:0,37,573	1/1:64,0:25:0.34:2,0,0	0/0:80,0:26:68.81:0,69,1012	0/0:82,0:66:74.84:0,75,1684	0/1:89,0:32:94.62:95,0,290	0/0:27,1:20:0.47:0,0,1	0/0:80,0:69:99:0,128,2243	0/0:63,0:46:89.55:0,90,1614	0/0:76,0:53:77.91:0,78,1353	0/1:72,4:51:14.06:14,0,19	0/0:53,1:27:1.46:0,1,105	0/1:37,0:32:58.20:58,0,225	0/0:42,1:27:8.50:0,8,342	0/0:26,0:10:24.08:0,24,431	0/0:56,0:44:89.98:0,90,1413	0/0:169,0:111:99:0,175,3014	0/0:57,0:40:74.95:0,75,1296	0/0:37,0:28:49.16:0,49,864	0/0:79,0:67:99:0,111,1938	0/0:48,0:28:18.04:0,18,241	0/1:62,16:43:99:448,0,730	0/0:34,0:22:50.16:0,50,842	0/1:21,9:22:99:123,0,207
chr10	83905751	.	ATG	A	151.04	PASS	AB=0.991;AC=10;AF=0.192;AN=52;BaseQRankSum=9.237;DP=1552;FS=3.386;HRun=0;HaplotypeScore=210.6481;InbreedingCoeff=0.1732;MQ=33.95;MQ0=339;MQRankSum=-8.715;QD=0.32;ReadPosRankSum=-2.031;VQSLOD=2.6436;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:64,0:45:0.14:0,0,0	1/1:23,0:10:2.98:21,3,0	./.	./.	0/0:41,0:32:60.17:0,60,956	0/0:46,0:28:28.16:0,28,504	0/1:60,0:23:0.17:0,0,0	0/0:81,0:25:49.49:0,49,713	0/0:83,0:67:94.42:0,94,1543	0/1:89,1:33:60.36:60,0,283	0/1:28,1:21:0:0,0,0	0/0:79,0:68:99:0,116,1937	0/0:62,0:46:90.27:0,90,1496	0/0:76,0:53:75.23:0,75,1208	0/0:73,0:49:4.08:0,4,39	0/1:53,1:27:12.26:12,0,94	0/1:37,0:32:19.33:19,0,205	0/0:43,0:27:18.67:0,19,384	0/0:25,0:10:24.08:0,24,364	0/0:52,0:42:81.21:0,81,1268	0/0:169,0:109:99:0,163,2673	0/0:55,0:39:66.23:0,66,1111	0/0:37,0:28:48.02:0,48,803	0/0:79,0:67:99:0,99,1618	0/0:48,0:28:13.90:0,14,134	0/1:77,1:44:99:131,0,684	0/0:35,0:23:47.15:0,47,727	0/1:30,0:22:27.33:27,0,213
chr10	83905789	.	GTA	G	375	PASS	AB=0.921;AC=6;AF=0.111;AN=54;BaseQRankSum=7.112;DP=1244;FS=8.841;HRun=0;HaplotypeScore=170.9090;InbreedingCoeff=0.2953;MQ=35.95;MQ0=221;MQRankSum=-5.391;QD=2.04;ReadPosRankSum=-0.920;VQSLOD=2.0598;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,1:41:3.82:0,4,17	0/0:15,2:10:2.22:0,2,7	./.	0/0:26,0:3:5.43:0,5,104	0/0:23,0:18:33.08:0,33,545	0/0:42,0:28:46.59:0,47,774	0/1:34,7:16:0:0,0,0	0/0:62,0:28:18.05:0,18,770	0/0:67,0:60:91.06:0,91,1579	1/1:49,9:20:2.41:332,2,0	0/1:19,1:16:0:0,0,0	0/0:58,0:51:97.40:0,97,1436	0/0:41,0:34:48.91:0,49,1031	0/0:64,0:48:66.08:0,66,1083	0/0:53,0:35:11.84:0,12,97	0/0:39,2:27:4.83:0,5,55	0/1:30,5:31:46.54:121,0,47	0/1:29,0:20:21.85:22,0,30	0/0:29,0:14:32.82:0,33,446	0/0:46,0:37:63.08:0,63,989	0/0:124,0:86:45.24:0,45,1499	0/0:50,0:41:71.82:0,72,1154	0/0:32,0:28:25.08:0,25,602	0/0:70,0:61:65.35:0,65,1328	0/0:33,0:23:5.91:0,6,38	0/0:59,0:42:18.97:0,19,639	0/0:34,0:29:50.11:0,50,872	0/0:19,0:13:17.07:0,17,188
chr10	83905791	.	A	ATG	694.55	PASS	AB=0.990;AC=15;AF=0.278;AN=54;BaseQRankSum=8.255;DP=1210;FS=17.764;HRun=0;HaplotypeScore=168.4299;InbreedingCoeff=0.4176;MQ=36.18;MQ0=203;MQRankSum=-7.687;QD=1.69;ReadPosRankSum=-0.559;VQSLOD=1.5766;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:44,1:37:0.89:2,1,0	0/0:17,0:10:2.74:0,3,12	./.	0/0:29,0:4:4.28:0,4,39	0/0:23,0:18:24.01:0,24,262	0/0:41,0:28:42.07:0,42,482	0/1:38,0:16:0.01:0,0,0	0/0:60,0:28:41.85:0,42,407	0/0:69,0:62:83.11:0,83,937	0/1:54,0:19:18.51:19,0,57	0/1:19,0:15:0:0,0,0	0/0:58,0:53:77.18:0,77,799	0/0:39,0:32:53.92:0,54,570	0/0:61,0:47:62.99:0,63,717	0/1:51,2:35:4.13:90,0,4	0/0:40,0:27:5.27:0,5,36	0/1:36,0:33:34.66:43,0,35	1/1:29,0:20:3.37:8,3,0	0/0:27,0:14:17.78:0,18,175	0/0:48,0:39:45.47:0,45,551	0/0:116,0:84:71.97:0,72,765	0/0:46,0:37:56.97:0,57,615	0/1:26,1:25:14.64:15,0,327	0/0:69,0:60:62.80:0,63,699	0/1:32,0:22:0.13:0,0,0	1/1:51,7:41:12.20:533,12,0	0/0:33,0:28:38.60:0,39,441	1/1:16,3:13:14.84:126,15,0
chr10	83905801	.	G	GTA	225.35	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=7.594;DP=1049;FS=4.790;HRun=0;HaplotypeScore=157.4453;InbreedingCoeff=0.2208;MQ=40.98;MQ0=108;MQRankSum=-5.369;QD=0.94;ReadPosRankSum=0.893;VQSLOD=2.4890;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:30:0.83:2,1,0	0/0:12,0:10:5.55:0,6,26	0/0:28,0:3:2.73:0,3,23	0/0:36,0:5:8.81:0,9,95	0/0:23,0:19:39.05:0,39,480	0/0:32,1:27:51.13:0,51,709	0/1:32,0:19:0.01:0,0,0	0/0:42,0:29:71.82:0,72,828	0/0:63,0:60:97.15:0,97,1367	0/0:35,0:18:37.55:0,38,274	0/0:16,0:14:2.80:0,3,15	0/0:51,0:49:92.29:0,92,1243	0/0:35,0:30:66.10:0,66,879	0/0:57,1:48:69.10:0,69,992	0/1:44,0:32:21.29:50,0,21	0/0:32,1:26:5.52:0,6,67	0/1:34,0:32:1.13:1,0,129	0/0:20,0:14:5.01:0,5,39	0/0:28,0:17:47.82:0,48,489	0/0:42,0:36:62.89:0,63,823	0/0:98,1:75:99:0,108,1285	0/0:39,0:34:66.18:0,66,925	0/0:25,0:23:14.44:0,14,481	0/0:62,1:56:81.10:0,81,1092	1/1:23,0:19:2.81:20,3,0	0/1:50,0:39:99:239,0,190	0/0:29,0:28:54.21:0,54,705	0/1:14,0:9:7.58:24,0,8
chr10	83905804	.	TGTGCGCGCAC	T	1859.46	PASS	AB=0.938;AC=18;AF=0.321;AN=56;BaseQRankSum=8.293;DP=956;FS=49.461;HRun=0;HaplotypeScore=203.6080;InbreedingCoeff=0.4675;MQ=42.32;MQ0=77;MQRankSum=-9.044;QD=5.83;ReadPosRankSum=-0.380;VQSLOD=0.9257;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:30:5.36:0,5,78	1/1:9,3:10:6.02:185,6,0	0/0:30,0:4:5.99:0,6,103	0/0:37,0:5:5.95:0,6,76	0/0:21,0:19:36.10:0,36,1244	0/0:27,0:24:48.16:0,48,1630	0/1:32,0:22:0:1,0,0	0/1:32,0:25:9.02:9,0,650	0/0:56,0:54:82.36:0,82,2790	1/1:29,3:19:30.97:793,31,0	1/1:8,7:13:2.57:86,3,0	0/0:47,0:46:86.96:0,87,2048	0/0:33,0:30:60.14:0,60,1489	0/0:57,0:48:75.10:0,75,2419	0/1:35,0:26:3.41:75,0,3	0/1:13,15:25:19.39:92,0,19	1/1:22,14:34:23.52:531,24,0	1/1:17,0:15:13.10:109,13,0	0/0:27,0:19:32.67:0,33,932	0/0:39,0:34:53.88:0,54,1893	0/0:82,0:65:86.30:0,86,2324	0/0:33,0:31:62.52:0,63,2181	0/0:23,0:21:39.13:0,39,1376	0/0:60,0:55:74.86:0,75,2410	1/1:23,0:19:0.05:0,0,0	0/1:45,1:38:99:139,0,350	0/0:26,0:26:45.07:0,45,1228	0/1:11,0:10:7.19:7,0,43
chr10	83905806	.	TGCGCGCAC	T	1298.76	PASS	AB=0.988;AC=19;AF=0.339;AN=56;BaseQRankSum=8.223;DP=874;FS=38.123;HRun=0;HaplotypeScore=175.4934;InbreedingCoeff=0.5299;MQ=43.94;MQ0=50;MQRankSum=-8.394;QD=5.05;ReadPosRankSum=0.540;VQSLOD=1.0852;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:28:5.36:0,5,78	1/1:11,0:10:6.02:150,6,0	0/0:31,0:4:6.02:0,6,103	0/0:37,0:5:5.84:0,6,38	0/0:19,0:19:36.10:0,36,1198	0/0:25,0:23:48.16:0,48,1638	1/1:31,0:22:1.41:2,1,0	0/0:28,0:23:44.39:0,44,500	0/0:48,0:50:90.28:0,90,2738	1/1:29,1:20:2.61:422,3,0	1/1:12,1:13:2.68:86,3,0	0/0:45,0:44:86.29:0,86,1954	0/0:32,0:31:62.93:0,63,1452	0/0:46,0:42:78.25:0,78,2511	1/1:25,0:22:2.36:90,2,0	0/1:25,1:24:20.27:57,0,20	1/1:30,3:32:26.43:392,26,0	1/1:10,0:10:11.95:128,12,0	0/0:27,0:19:37.53:0,38,935	0/0:32,0:32:53.71:0,54,1884	0/0:69,0:60:85.87:0,86,2080	0/0:33,0:31:62.49:0,62,2173	0/0:19,0:18:39.13:0,39,1359	0/0:60,0:55:77.92:0,78,2469	1/1:21,0:21:0.13:0,0,0	0/1:39,0:36:99:127,0,208	0/0:22,0:22:44.86:0,45,1220	0/1:8,0:8:7.17:7,0,32
chr10	83905807	.	GCGCGCA	G	705.37	PASS	AB=0.939;AC=16;AF=0.286;AN=56;BaseQRankSum=7.093;DP=821;FS=15.556;HRun=0;HaplotypeScore=157.5527;InbreedingCoeff=0.4123;MQ=45.11;MQ0=41;MQRankSum=-5.339;QD=3.19;ReadPosRankSum=1.385;VQSLOD=2.1038;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:26:11.41:0,11,226	1/1:11,0:10:6.02:104,6,0	0/0:31,0:4:5.99:0,6,95	0/0:39,0:6:11.74:0,12,193	0/0:18,0:18:33.07:0,33,983	0/0:26,0:23:51.16:0,51,1513	1/1:27,0:21:0.94:2,1,0	0/0:26,0:22:39.10:0,39,839	0/0:47,0:47:71.57:0,72,2457	0/1:27,0:19:99:205,0,114	1/1:13,0:13:2.66:63,3,0	0/0:45,0:44:69.12:0,69,1929	0/0:28,0:28:51.16:0,51,1449	0/0:45,0:41:75.23:0,75,2291	0/1:16,5:17:13.06:136,0,13	1/1:23,1:22:1.72:44,2,0	0/1:31,0:29:10.90:196,0,11	1/1:10,0:9:7.28:42,7,0	0/0:26,0:18:36.07:0,36,858	0/0:29,0:29:48.16:0,48,1592	0/0:63,1:57:80.14:0,80,2232	0/0:32,0:31:56.69:0,57,1789	0/0:18,0:17:39.13:0,39,1303	0/0:59,0:55:68.84:0,69,2140	1/1:14,9:20:0.27:0,0,0	0/1:31,0:30:60.26:60,0,485	0/0:22,1:23:41.98:0,42,1282	0/0:8,0:8:11.44:0,11,75
chr10	83905809	.	GCGCA	G	397.62	PASS	AB=0.992;AC=14;AF=0.250;AN=56;BaseQRankSum=6.719;DP=727;FS=9.437;HRun=0;HaplotypeScore=132.9961;InbreedingCoeff=0.3775;MQ=45.21;MQ0=31;MQRankSum=-5.505;QD=1.91;ReadPosRankSum=1.129;VQSLOD=1.3510;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,3:26:11.52:0,12,171	1/1:11,0:10:6.01:70,6,0	0/0:34,0:4:6.01:0,6,81	0/0:43,0:8:14.99:0,15,219	0/0:12,0:12:30.10:0,30,723	0/0:24,0:22:48.15:0,48,1130	0/1:26,0:21:0:1,0,0	0/0:22,0:18:36.10:0,36,684	0/0:37,0:37:72.06:0,72,1879	0/1:27,0:20:99:155,0,269	1/1:13,0:13:2.91:43,3,0	0/0:34,1:34:63:0,63,1418	0/0:25,0:25:51.10:0,51,1154	0/0:38,0:35:72.17:0,72,1709	0/1:18,0:16:68.28:68,0,121	1/1:23,0:21:1.05:24,1,0	0/1:30,0:29:73.01:133,0,73	1/1:7,0:7:6.99:29,7,0	0/0:26,0:18:41.16:0,41,704	0/0:23,0:23:48.16:0,48,1226	0/0:50,1:45:75.67:0,76,1753	0/0:29,0:28:59.96:0,60,1436	0/0:18,0:17:42.14:0,42,1035	0/0:41,0:39:65.95:0,66,1599	0/1:22,0:20:0.40:0,0,0	0/1:30,0:28:19.88:20,0,603	0/0:19,0:19:42.14:0,42,977	0/0:7,0:7:5.95:0,6,70
chr10	83905814	.	C	CGT	803.06	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=4.401;DP=758;FS=13.511;HRun=0;HaplotypeScore=132.0879;InbreedingCoeff=0.5334;MQ=46.81;MQ0=24;MQRankSum=-1.708;QD=3.42;ReadPosRankSum=-2.942;VQSLOD=1.3103;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,4:26:9.92:153,10,0	0/1:12,0:11:3.22:3,0,7	0/0:40,0:6:8.69:0,9,71	0/0:46,0:9:10.34:0,10,90	0/0:15,0:13:30.08:0,30,368	0/0:27,0:22:34.35:0,34,422	0/1:24,0:20:0:0,0,0	0/0:13,0:12:17.96:0,18,182	0/0:43,0:43:59.84:0,60,725	0/1:26,0:20:3.70:71,0,4	1/1:14,0:14:5.23:53,5,0	0/0:34,0:33:41.96:0,42,454	0/0:29,0:29:41.69:0,42,490	0/0:37,0:33:72.10:0,72,845	0/1:20,0:17:1.27:21,0,1	0/0:24,0:22:2.12:0,2,11	0/1:31,0:30:11.37:11,0,22	0/1:14,0:14:9.43:13,0,9	0/0:25,0:20:39.11:0,39,478	0/0:21,0:22:48.06:0,48,562	0/0:53,0:44:56.84:0,57,633	0/0:33,0:32:63.20:0,63,799	0/0:17,0:17:36.06:0,36,424	0/0:47,0:44:54.13:0,54,668	1/1:23,0:20:5.85:48,6,0	1/1:18,14:28:30.59:542,31,0	0/0:18,0:18:41.58:0,42,447	1/1:3,1:5:3.48:51,3,0
chr10	83905817	.	G	GTA	267.67	PASS	AB=0.987;AC=7;AF=0.125;AN=56;BaseQRankSum=6.363;DP=747;FS=6.538;HRun=0;HaplotypeScore=129.1924;InbreedingCoeff=0.1863;MQ=47.26;MQ0=22;MQRankSum=-2.837;QD=2.21;ReadPosRankSum=-0.270;VQSLOD=1.9686;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:27:11.10:70,0,11	0/0:13,0:12:5.87:0,6,36	0/0:40,0:6:11.24:0,11,125	0/0:45,0:10:4.68:0,5,127	0/0:16,0:14:39.08:0,39,530	0/0:28,0:22:48.08:0,48,626	0/1:24,0:20:0:0,0,0	0/0:11,0:10:6.07:0,6,321	0/0:42,0:42:77.90:0,78,1051	0/0:28,0:21:23.98:0,24,213	0/1:15,0:15:12.86:13,0,26	0/0:33,0:32:66.08:0,66,815	0/0:29,0:29:54.11:0,54,728	0/0:37,0:33:72.24:0,72,1076	0/0:22,0:19:8.37:0,8,64	0/0:23,0:21:5.34:0,5,44	0/0:28,1:28:14.31:0,14,97	0/1:13,1:14:12.12:14,0,12	0/0:26,0:22:60.11:0,60,789	0/0:22,0:22:48.16:0,48,724	0/0:51,0:43:78.12:0,78,1024	0/0:31,0:30:69.20:0,69,1011	0/0:15,0:15:45.10:0,45,615	0/0:42,2:42:63.12:0,63,885	0/0:23,0:20:0.41:0,0,1	0/1:32,0:27:65.37:256,0,65	0/0:18,0:18:44.62:0,45,622	1/1:2,0:2:2.09:30,2,0
chr10	83905818	.	TGTGTGTGCGCGCAC	T	198.41	PASS	AB=0.944;AC=8;AF=0.143;AN=56;BaseQRankSum=7.737;DP=749;FS=10.386;HRun=0;HaplotypeScore=212.6196;InbreedingCoeff=0.2205;MQ=47.37;MQ0=21;MQRankSum=-6.297;QD=1.35;ReadPosRankSum=-0.316;VQSLOD=1.4862;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:29:14.23:0,14,382	0/1:13,0:12:1.30:1,0,52	0/0:40,0:6:14.26:0,14,254	0/0:45,0:10:22.63:0,23,557	0/0:16,0:14:36.12:0,36,1723	0/0:27,0:22:39.13:0,39,2201	0/1:12,12:20:0:0,0,0	0/0:11,0:10:24.07:0,24,696	0/0:42,0:42:68.09:0,68,3400	0/1:28,0:21:73.43:73,0,92	0/1:15,0:15:10.12:10,0,50	0/0:33,0:32:60.18:0,60,2167	0/0:29,0:29:45.14:0,45,1763	0/0:37,0:33:72.17:0,72,3443	1/1:24,0:21:11.24:198,11,0	0/0:24,0:22:8.24:0,8,123	0/1:29,0:28:27.05:27,0,35	0/1:14,0:14:9.46:10,0,9	0/0:26,0:23:54.18:0,54,1876	0/0:21,0:21:51.13:0,51,2294	0/0:51,0:43:65.94:0,66,2516	0/0:31,0:30:65.17:0,65,3532	0/0:16,0:16:42.13:0,42,1908	0/0:43,0:41:60.15:0,60,3168	0/0:22,0:19:8.78:0,9,125	0/0:32,0:27:11.70:0,12,850	0/0:18,0:18:42.96:0,43,1823	0/0:2,0:2:3.01:0,3,112
chr10	83905821	.	G	GTA	301.79	PASS	AB=0.973;AC=9;AF=0.161;AN=56;BaseQRankSum=5.942;DP=739;FS=0.946;HRun=0;HaplotypeScore=121.1490;InbreedingCoeff=0.2188;MQ=48.61;MQ0=18;MQRankSum=-1.617;QD=2.01;ReadPosRankSum=-0.186;VQSLOD=2.2929;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:30:0.88:73,1,0	0/0:13,0:12:8.90:0,9,67	0/0:37,0:7:13.92:0,14,138	0/0:43,0:11:13.80:0,14,173	0/0:17,0:15:36.09:0,36,503	0/0:26,0:21:45.09:0,45,601	0/1:23,0:19:0:0,0,0	0/0:12,0:11:33.07:0,33,403	0/0:41,0:42:75.14:0,75,1004	0/1:27,0:22:10.57:11,0,224	0/1:16,0:16:12.79:13,0,27	0/0:31,0:31:68.93:0,69,826	0/0:25,1:27:51.11:0,51,704	0/0:38,0:34:75.23:0,75,1109	0/0:23,0:20:8.86:0,9,66	0/0:23,0:21:5.38:0,5,54	0/0:28,1:28:15.89:0,16,123	0/1:13,1:14:16.02:47,0,16	0/0:27,0:24:60.11:0,60,772	0/0:19,0:19:51.16:0,51,749	0/0:50,1:43:69.11:0,69,927	0/0:29,0:28:66.21:0,66,986	0/0:16,0:16:48.10:0,48,638	0/0:39,4:41:60.16:0,60,867	0/0:20,1:19:3.83:0,4,27	0/1:29,1:25:82.96:251,0,83	0/0:18,0:18:45.13:0,45,634	1/1:2,0:2:2.08:30,2,0
chr10	83905832	.	C	CGT	218.68	PASS	AB=0.864;AC=6;AF=0.107;AN=56;BaseQRankSum=1.345;DP=729;FS=12.430;HRun=0;HaplotypeScore=123.8145;InbreedingCoeff=0.6493;MQ=52.34;MQ0=11;MQRankSum=-3.370;QD=2.70;ReadPosRankSum=-2.108;VQSLOD=0.8981;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:27:22.72:0,23,257	0/0:11,0:11:15.05:0,15,185	0/0:39,0:14:26.88:0,27,291	0/0:39,0:19:35.76:0,36,347	0/0:18,0:16:39.12:0,39,487	0/0:27,0:22:42.10:0,42,498	1/1:19,0:17:2.96:20,3,0	0/1:23,0:23:8.75:9,0,476	0/0:40,0:40:54.17:0,54,675	0/0:23,0:19:32.92:0,33,457	0/0:14,0:14:14.98:0,15,183	0/0:27,0:26:51.16:0,51,637	0/0:25,0:25:30.09:0,30,375	0/0:34,0:32:60.19:0,60,750	1/1:10,13:21:15.05:246,15,0	0/0:18,0:18:20.79:0,21,237	0/0:30,0:30:27.04:0,27,303	0/1:10,6:16:0.40:64,0,0	0/0:29,0:29:63.47:0,63,748	0/0:20,0:20:39.12:0,39,487	0/0:48,0:40:60.17:0,60,735	0/0:35,0:34:63.16:0,63,770	0/0:15,0:15:38.94:0,39,451	0/0:44,0:43:57.14:0,57,694	0/0:25,0:22:23.83:0,24,280	0/0:28,0:22:45.02:0,45,483	0/0:17,0:17:39.11:0,39,472	0/0:5,0:5:12.02:0,12,132
chr10	83906607	.	A	AC	4868.68	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=2.333;DP=589;FS=7.931;HRun=7;HaplotypeScore=75.1879;InbreedingCoeff=0.9313;MQ=72.64;MQ0=2;MQRankSum=-1.773;QD=17.14;ReadPosRankSum=0.890;VQSLOD=4.3702;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:35:63.22:321,63,0	1/1:1,2:3:6.02:72,6,0	0/1:15,0:14:2.93:3,0,67	0/0:10,0:9:11.92:0,12,102	0/0:21,0:21:47.09:0,47,439	0/0:13,0:13:36.04:0,36,341	1/1:21,0:35:60.25:313,60,0	0/0:20,0:20:48.08:0,48,463	0/0:20,0:20:54.08:0,54,521	1/1:1,20:21:60.16:710,60,0	1/1:2,11:13:18.05:213,18,0	0/0:18,0:18:48.07:0,48,462	0/0:22,0:22:60.09:0,60,577	0/0:23,0:23:69.11:0,69,666	1/1:0,0:20:43.13:219,43,0	1/1:1,16:17:39.11:466,39,0	1/1:2,34:36:84.26:1015,84,0	1/1:4,0:30:74.81:395,75,0	0/0:16,0:16:39:0,39,365	0/0:19,0:19:51.08:0,51,491	0/0:37,0:37:99:0,102,979	0/0:23,0:23:66.08:0,66,630	0/0:19,0:19:51.02:0,51,474	0/0:20,0:20:54.08:0,54,521	1/1:5,0:29:48.73:247,49,0	1/1:2,18:20:54.15:639,54,0	0/0:24,0:24:72.11:0,72,689	1/1:1,7:8:21.06:254,21,0
chr10	83907772	.	CCCT	C	896.10	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=4.170;DP=407;FS=2.909;HRun=0;HaplotypeScore=62.1608;InbreedingCoeff=0.4726;MQ=73.96;MQ0=0;MQRankSum=0.040;QD=8.30;ReadPosRankSum=-2.430;VQSLOD=1.9555;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:25:42.12:646,42,0	1/1:2,0:2:0.47:1,0,0	0/0:10,0:9:21.43:0,21,271	0/0:12,0:10:18.70:0,19,267	0/0:9,0:9:27.09:0,27,554	0/0:10,0:10:30.06:0,30,529	0/1:30,0:30:99:164,0,225	0/0:14,0:14:39.11:0,39,652	0/0:14,0:14:42.13:0,42,832	0/1:5,0:5:16.87:17,0,21	0/0:5,0:5:5.67:0,6,36	0/0:24,0:24:69.19:0,69,1358	0/0:17,0:17:51.16:0,51,1004	0/0:28,0:28:78.16:0,78,1438	0/0:11,0:11:4.76:0,5,23	0/0:5,0:5:2.58:0,3,63	0/1:16,0:16:55.19:55,0,145	0/0:15,0:15:1.55:0,2,4	0/0:23,0:22:65.94:0,66,1260	0/0:9,0:9:24.08:0,24,496	0/0:38,0:38:99:0,102,1954	0/0:7,0:7:18.05:0,18,346	0/0:6,0:6:12.03:0,12,217	0/0:20,0:20:54.17:0,54,1113	1/1:10,0:10:2.80:13,3,0	1/1:14,0:14:27.86:140,28,0	0/0:22,0:22:63.21:0,63,1317	1/1:6,0:6:2.80:13,3,0
chr10	83907773	.	CCT	C	1061.73	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=5.493;DP=407;FS=5.338;HRun=0;HaplotypeScore=54.2063;InbreedingCoeff=0.5362;MQ=73.98;MQ0=0;MQRankSum=-1.817;QD=7.37;ReadPosRankSum=-3.394;VQSLOD=1.3850;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:23,2:25:41.92:342,42,0	1/1:2,0:2:5.98:48,6,0	0/0:10,0:9:19.67:0,20,221	0/0:12,0:10:18.74:0,19,232	0/0:9,0:9:27.08:0,27,439	0/0:11,0:11:33.05:0,33,469	0/1:30,0:30:91.14:184,0,91	0/0:14,0:14:39.10:0,39,544	0/0:14,0:14:41.91:0,42,656	0/1:6,0:6:16.87:17,0,20	0/1:4,0:4:8.05:8,0,11	0/0:25,0:25:72.19:0,72,1133	0/0:17,0:17:51.15:0,51,816	0/0:28,0:28:78.16:0,78,1195	1/1:11,0:11:2.68:11,3,0	1/1:5,0:5:4.84:49,5,0	0/1:16,0:16:50.15:68,0,50	1/1:15,0:15:2.60:10,3,0	0/0:23,0:22:54.33:0,54,1012	0/0:9,0:9:24.08:0,24,395	0/0:36,0:36:99:0,102,1586	0/0:6,0:6:18.05:0,18,285	0/0:6,0:6:12.03:0,12,180	0/0:21,0:21:57.14:0,57,925	1/1:9,1:10:3.01:46,3,0	1/1:2,12:14:35.85:412,36,0	0/0:22,0:22:63.21:0,63,1074	1/1:0,6:6:3.01:46,3,0
chr10	83909588	.	G	GCC	1375.66	PASS	AB=0.605;AC=15;AF=0.268;AN=56;BaseQRankSum=1.441;DP=409;FS=9.418;HRun=9;HaplotypeScore=58.8207;InbreedingCoeff=0.5966;MQ=78.09;MQ0=0;MQRankSum=-1.183;QD=10.27;ReadPosRankSum=0.164;VQSLOD=0.1644;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,10:22:8:64,8,0	1/1:1,3:4:9.03:139,9,0	0/0:11,0:11:16.97:0,17,142	0/0:21,0:20:28.58:0,29,245	0/0:11,0:11:24.01:0,24,247	0/0:14,0:14:24.03:0,24,255	0/0:19,0:19:48.08:0,48,502	0/0:13,0:13:21.02:0,21,217	0/0:6,0:7:17.77:0,18,171	1/1:3,5:8:9.01:115,9,0	1/1:3,6:9:9.03:138,9,0	0/0:12,0:12:33.07:0,33,343	0/0:14,0:14:36.08:0,36,383	0/0:11,0:11:30.05:0,30,311	0/0:9,0:9:24.06:0,24,255	0/1:6,10:18:28.77:351,0,29	1/1:3,17:24:41.40:581,41,0	0/0:30,0:32:78.15:0,78,885	0/0:10,0:10:21.05:0,21,223	0/0:4,0:4:2.97:0,3,32	0/0:32,0:32:75.14:0,75,789	0/0:4,0:4:2.99:0,3,32	0/0:8,0:8:18.01:0,18,184	0/0:28,0:28:69.14:0,69,734	1/1:3,0:23:3.52:80,4,0	0/1:4,0:14:10.71:56,0,11	0/0:13,0:14:30.03:0,30,375	0/1:5,0:12:20.92:27,0,21
chr10	83909779	.	C	CTGTG	748.01	PASS	AB=0.791;AC=20;AF=0.400;AN=50;BaseQRankSum=-2.631;DP=465;FS=0.000;HRun=0;HaplotypeScore=104.1213;InbreedingCoeff=0.2977;MQ=66.38;MQ0=13;MQRankSum=-1.145;QD=3.90;ReadPosRankSum=-3.100;VQSLOD=1.3851;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:22:6.01:0,6,55	0/0:9,0:9:2.98:0,3,21	./.	./.	0/1:10,3:15:18.94:64,0,19	1/1:11,1:12:15.46:204,15,0	0/0:24,0:23:0.20:0,0,1	1/1:27,0:26:1.72:4,2,0	0/1:19,0:21:68.08:68,0,87	1/1:6,0:8:1.22:3,1,0	0/0:8,0:8:3.01:0,3,46	0/1:7,2:10:17.61:63,0,18	1/1:8,0:15:2.95:39,3,0	./.	0/0:18,0:18:9.47:0,9,68	0/0:7,0:11:9.01:0,9,84	0/0:9,0:14:6.01:0,6,56	0/0:7,0:17:17.97:0,18,167	0/0:16,0:15:0.35:0,0,1	0/0:7,0:10:6.01:0,6,56	0/0:29,0:30:15.01:0,15,138	1/1:8,0:12:3.01:52,3,0	1/1:5,2:9:6.02:140,6,0	0/1:26,9:40:13.63:227,0,14	1/1:9,0:9:1.82:5,2,0	1/1:12,0:12:3.92:22,4,0	0/0:8,0:10:15.24:0,15,114	0/0:12,0:20:8.60:0,9,66
chr10	83910570	.	A	ATTTGG	2428.45	PASS	AB=0.982;AC=18;AF=0.346;AN=52;BaseQRankSum=-5.615;DP=521;FS=10.097;HRun=0;HaplotypeScore=131.9346;InbreedingCoeff=0.7171;MQ=70.51;MQ0=2;MQRankSum=-4.797;QD=12.08;ReadPosRankSum=0.611;VQSLOD=2.4914;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,11:28:19.26:398,19,0	1/1:4,3:7:5.93:40,6,0	0/0:32,0:28:13.33:0,13,245	0/0:27,0:23:17.77:0,18,207	0/0:18,0:18:9.01:0,9,114	0/0:20,0:20:21.03:0,21,296	./.	0/0:24,0:23:30.07:0,30,436	0/0:17,0:17:15.05:0,15,250	1/1:11,6:18:22.28:392,22,0	1/1:10,8:18:8.82:112,9,0	./.	0/0:16,0:16:15.05:0,15,266	0/0:11,0:11:3.01:0,3,39	1/1:15,11:25:23.87:354,24,0	1/1:2,13:15:33.07:821,33,0	1/1:14,6:20:14.95:258,15,0	1/1:9,2:11:6.02:170,6,0	0/0:18,0:18:18.04:0,18,264	0/0:20,0:20:24.04:0,24,318	0/0:17,0:17:14.96:0,15,135	0/0:16,0:16:24.06:0,24,318	0/0:9,0:9:12.04:0,12,159	0/1:30,0:30:20.66:21,0,109	0/0:17,0:16:14.84:0,15,192	0/1:26,1:27:51.81:52,0,405	0/0:13,0:13:12.04:0,12,213	0/0:18,0:18:24.06:0,24,394
chr10	83911148	.	TGA	T	197.33	PASS	AB=1.000;AC=19;AF=0.594;AN=32;BaseQRankSum=1.570;DP=318;FS=4.121;HRun=0;HaplotypeScore=59.6280;InbreedingCoeff=0.5219;MQ=34.54;MQ0=63;MQRankSum=-0.431;QD=1.46;ReadPosRankSum=-1.087;VQSLOD=1.2893;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	0/1:9,0:6:0:0,0,0	1/1:12,0:13:0.21:1,0,0	./.	0/0:13,0:6:2.97:0,3,25	1/1:5,0:3:2.74:12,3,0	./.	1/1:13,0:6:1.82:5,2,0	1/1:7,0:7:2.93:20,3,0	0/0:4,0:2:2.94:0,3,18	1/1:9,4:13:3.35:16,3,0	./.	0/0:14,0:10:2.62:0,3,16	1/1:15,0:12:14.67:91,15,0	./.	./.	1/1:30,0:25:8.81:54,9,0	./.	0/0:9,0:6:3:0,3,25	0/0:31,0:25:22.96:0,23,165	1/1:14,0:11:8.67:62,9,0	0/0:11,0:8:11.50:0,11,63	1/1:12,1:12:8.79:52,9,0	./.
chr10	83911945	.	A	AC	479.84	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-3.180;DP=566;FS=2.997;HRun=3;HaplotypeScore=60.9972;InbreedingCoeff=0.5902;MQ=74.67;MQ0=0;MQRankSum=0.160;QD=12.97;ReadPosRankSum=-1.092;VQSLOD=1.8454;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,142,1706	0/0:3,0:3:6.02:0,6,71	0/1:19,0:17:16.80:17,0,262	0/0:13,0:13:17.63:0,18,155	0/0:15,0:15:42.08:0,42,484	0/0:23,0:23:66.16:0,66,752	1/1:0,18:18:42.14:568,42,0	0/0:25,0:25:72.19:0,72,833	0/0:22,0:22:57.14:0,57,655	0/0:12,0:12:36.10:0,36,422	0/0:17,0:17:48.12:0,48,551	0/0:22,0:22:63.15:0,63,732	0/0:10,0:10:30.09:0,30,358	0/0:23,0:23:63.16:0,63,727	0/0:20,0:20:57.14:0,57,647	0/0:13,0:13:39.07:0,39,421	0/0:34,0:34:96.24:0,96,1100	0/0:25,0:25:75.16:0,75,855	0/0:25,0:25:69.18:0,69,794	0/0:21,0:21:63.18:0,63,740	0/0:19,0:19:51.11:0,51,575	0/0:19,0:19:54.17:0,54,644	0/0:25,0:25:75.19:0,75,867	0/0:25,0:25:72.21:0,72,848	0/0:19,0:19:48.02:0,48,532	0/0:22,0:22:63.16:0,63,717	0/0:21,0:21:60.17:0,60,703	0/0:4,0:4:12.04:0,12,143
chr10	83912145	.	GA	G	970.12	PASS	AB=0.767;AC=6;AF=0.107;AN=56;BaseQRankSum=7.771;DP=573;FS=0.609;HRun=7;HaplotypeScore=55.8313;InbreedingCoeff=0.6759;MQ=67.03;MQ0=1;MQRankSum=-0.850;QD=14.48;ReadPosRankSum=1.303;VQSLOD=3.0378;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.19:0,90,1092	0/0:13,0:13:33.11:0,33,415	0/0:23,1:16:19.85:0,20,280	0/1:14,0:11:9.48:9,0,172	0/0:24,0:24:60.17:0,60,729	0/0:15,0:15:45.14:0,45,566	1/1:4,16:20:36.08:367,36,0	0/0:29,0:29:75.23:0,75,932	0/0:18,0:18:54.14:0,54,640	0/0:21,0:21:60.19:0,60,755	0/0:25,0:25:72.19:0,72,888	0/0:12,0:12:36.10:0,36,439	0/0:14,0:14:39.12:0,39,490	0/0:19,0:19:57.17:0,57,704	0/0:23,0:23:69.21:0,69,855	0/0:14,0:14:39.12:0,39,490	0/0:31,0:31:87.28:0,87,1092	0/0:27,0:27:66.21:0,66,829	0/0:21,0:21:48.12:0,48,577	0/0:28,0:28:78.24:0,78,968	0/0:14,0:14:39.12:0,39,489	0/0:23,0:23:69.22:0,69,868	0/0:15,0:15:45.14:0,45,566	0/0:19,0:19:51.12:0,51,624	0/0:24,0:24:69.22:0,69,868	0/1:3,21:24:6.33:573,0,6	0/0:21,0:21:60.18:0,60,742	1/1:1,8:9:14.87:153,15,0
chr10	83913231	.	ATC	A	589.64	PASS	AB=0.973;AC=19;AF=0.396;AN=48;BaseQRankSum=2.561;DP=590;FS=17.561;HRun=0;HaplotypeScore=78.8493;InbreedingCoeff=0.1714;MQ=62.49;MQ0=37;MQRankSum=2.055;QD=2.32;ReadPosRankSum=2.940;VQSLOD=-0.3799;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:25:20.64:146,21,0	0/0:12,0:12:0:0,0,0	./.	./.	1/1:19,0:19:2.99:24,3,0	0/0:9,0:9:5.67:0,6,36	0/0:10,0:15:3:0,3,25	0/0:39,0:35:1.25:0,1,3	0/0:22,0:21:8.98:0,9,73	0/0:26,0:23:23.72:0,24,164	0/0:14,0:13:3:0,3,25	0/1:23,0:22:34.69:35,0,38	0/1:19,0:17:16.50:17,0,86	1/1:21,0:21:8.96:69,9,0	1/1:10,0:10:5.98:47,6,0	0/0:18,0:18:14.98:0,15,125	0/0:23,0:23:12.37:0,12,191	0/1:11,0:9:10.68:38,0,11	0/1:16,5:18:7.98:110,0,8	0/1:19,0:19:14.01:14,0,14	0/1:21,0:20:21.90:22,0,57	./.	0/0:11,0:11:8.34:0,8,53	0/1:29,0:28:27.74:28,0,150	0/0:24,0:23:2.99:0,3,24	1/1:12,0:13:8.71:54,9,0	1/1:21,0:19:6.91:138,7,0	./.
chr10	83913336	.	G	GA	5684.36	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-6.494;DP=498;FS=3.920;HRun=1;HaplotypeScore=67.0018;InbreedingCoeff=0.9880;MQ=73.24;MQ0=1;MQRankSum=-0.581;QD=39.47;ReadPosRankSum=2.511;VQSLOD=5.6747;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:63.08:869,63,0	1/1:0,4:4:12.04:180,12,0	0/0:39,0:28:81.21:0,81,1007	0/0:41,0:30:79.27:0,79,945	0/0:6,0:6:18.06:0,18,232	0/0:10,0:10:30.10:0,30,389	1/1:0,25:25:59.95:799,60,0	0/0:23,0:23:69.21:0,69,883	0/0:17,0:17:48.14:0,48,607	1/1:0,10:10:30.10:450,30,0	1/1:0,19:19:54.18:809,54,0	0/0:17,0:17:48.16:0,48,622	0/0:8,0:8:24.08:0,24,312	0/0:4,0:4:12.04:0,12,156	1/1:0,15:15:39.13:584,39,0	1/1:0,13:13:39.13:584,39,0	1/1:0,21:21:57.16:829,57,0	1/1:0,14:14:39.13:579,39,0	0/0:15,0:15:45.15:0,45,584	0/0:19,0:19:54.18:0,54,700	0/0:33,0:33:84.26:0,84,1074	0/0:18,0:18:51.14:0,51,646	0/0:9,0:9:27.09:0,27,351	0/0:29,0:29:78.19:0,78,994	0/0:10,0:10:30.10:0,30,389	0/0:22,1:23:24.24:0,24,811	0/0:20,0:20:57.19:0,57,740	0/0:13,0:13:39.08:0,39,461
chr10	83914398	.	GTGTGTCTGTGTC	G	233.75	PASS	AB=1.000;AC=7;AF=0.135;AN=52;BaseQRankSum=5.342;DP=662;FS=6.774;HRun=0;HaplotypeScore=209.5776;InbreedingCoeff=0.6118;MQ=50.69;MQ0=22;MQRankSum=-0.183;QD=3.00;ReadPosRankSum=-0.033;VQSLOD=2.1451;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:21:5.51:0,6,163	0/0:4,0:3:5.81:0,6,171	./.	./.	0/0:19,0:19:24.04:0,24,473	0/0:22,0:21:33.03:0,33,588	1/1:24,0:23:3.01:46,3,0	0/0:43,0:39:25.62:0,26,170	0/0:21,0:20:42.03:0,42,1075	0/0:18,0:12:11.95:0,12,298	0/0:8,0:6:0:0,0,0	0/0:27,0:26:45.11:0,45,1279	0/0:18,0:18:36.08:0,36,1117	0/0:19,0:19:39.12:0,39,1673	0/0:26,0:24:24.08:0,24,630	0/0:25,0:23:9.60:0,10,673	0/0:22,0:19:30.76:0,31,655	0/1:20,0:20:1.03:1,0,446	0/0:32,0:27:14.88:0,15,422	0/0:21,0:21:26.98:0,27,839	0/0:82,0:78:66.15:0,66,1803	0/0:14,0:14:18.05:0,18,444	0/0:15,0:14:12.03:0,12,403	0/0:44,0:44:86.93:0,87,2597	0/0:12,0:12:3.48:0,3,133	1/1:19,6:23:15.03:199,15,0	0/0:30,0:31:54.05:0,54,1693	1/1:5,4:9:3.48:104,3,0
chr10	83914402	.	GTC	G	711.48	PASS	AB=0.967;AC=15;AF=0.268;AN=56;BaseQRankSum=8.835;DP=656;FS=12.049;HRun=0;HaplotypeScore=99.0296;InbreedingCoeff=0.0243;MQ=50.13;MQ0=26;MQRankSum=0.721;QD=2.70;ReadPosRankSum=-1.365;VQSLOD=0.9371;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:23:30.41:253,30,0	0/0:4,0:3:5.87:0,6,65	0/1:12,1:7:19.79:20,0,100	0/1:12,0:6:13.60:14,0,106	0/0:20,0:20:27.06:0,27,570	0/0:23,0:22:60.02:0,60,917	1/1:22,4:25:31.10:237,31,0	0/0:39,0:33:40.90:0,41,711	0/0:22,0:21:53.52:0,54,684	0/1:19,1:14:60.27:60,0,111	0/1:9,0:7:2.03:2,0,20	0/1:27,0:26:2.42:2,0,748	0/0:18,0:18:35.82:0,36,566	0/0:19,0:19:20.99:0,21,691	0/1:26,1:25:18.17:18,0,209	0/1:24,4:25:61.45:61,0,219	0/1:20,2:19:70.17:70,0,160	0/1:20,0:20:54.92:55,0,201	0/0:34,0:27:30.66:0,31,603	0/0:21,0:21:45.23:0,45,624	0/0:80,0:74:99:0,103,1851	0/0:14,0:14:36:0,36,452	0/0:15,0:14:30.05:0,30,440	0/0:43,0:43:77.75:0,78,1484	0/1:11,0:11:29.22:29,0,84	0/1:22,0:20:53.21:53,0,381	0/0:31,0:31:74.71:0,75,1076	0/0:9,0:9:10.60:0,11,234
chr10	83914408	.	GTC	G	312.09	PASS	AB=0.974;AC=9;AF=0.161;AN=56;BaseQRankSum=9.722;DP=641;FS=12.623;HRun=0;HaplotypeScore=98.5351;InbreedingCoeff=0.0004;MQ=49.86;MQ0=27;MQRankSum=-0.879;QD=1.69;ReadPosRankSum=-0.408;VQSLOD=1.1028;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:22:35.63:36,0,143	0/0:4,0:3:6.02:0,6,114	0/0:7,0:3:1.62:0,2,41	0/0:6,2:2:5.99:0,6,74	0/0:21,0:21:57.14:0,57,899	0/0:23,0:22:60.21:0,60,1092	1/1:19,2:20:18.77:139,19,0	0/0:37,0:31:92.88:0,93,1331	0/0:24,0:23:63.14:0,63,1069	0/1:21,0:15:54.17:54,0,299	0/0:10,0:8:9.01:0,9,130	0/0:30,0:29:84.16:0,84,1339	0/0:18,0:18:48.16:0,48,884	0/0:21,0:21:60.16:0,60,970	0/1:25,1:24:17.05:17,0,482	0/1:26,2:25:59.63:60,0,528	0/1:21,2:20:35.04:35,0,550	0/1:21,0:21:62.49:62,0,586	0/0:30,0:23:56.87:0,57,793	0/0:19,0:19:48.01:0,48,780	0/0:80,0:73:99:0,161,2686	0/0:12,0:12:30.10:0,30,531	0/0:17,0:16:36.11:0,36,605	0/0:43,0:43:99:0,117,2082	0/0:12,0:12:0.84:0,1,202	0/1:19,0:17:52.12:52,0,305	0/0:31,0:31:92.78:0,93,1585	0/0:9,0:9:7.07:0,7,256
chr10	83917252	.	CAT	C	1027.18	PASS	AB=0.864;AC=16;AF=0.296;AN=54;BaseQRankSum=3.956;DP=654;FS=6.218;HRun=0;HaplotypeScore=212.0383;InbreedingCoeff=-0.4149;MQ=32.89;MQ0=4;MQRankSum=-3.980;QD=2.42;ReadPosRankSum=0.977;VQSLOD=2.2024;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,1:16:8.97:0,9,38	0/1:12,1:13:11.15:11,0,12	./.	0/0:11,0:3:4.26:0,4,61	0/0:29,5:34:2.31:0,2,57	0/1:18,2:20:32.96:33,0,35	0/1:10,6:16:5.78:6,0,29	0/1:20,7:22:99:363,0,361	0/1:28,4:32:22.66:23,0,209	0/1:35,6:38:99:167,0,653	0/0:16,4:20:0.47:0,0,1	0/1:20,7:27:36.05:36,0,82	0/1:16,5:21:38.82:39,0,70	0/0:15,4:19:8.89:0,9,150	0/1:19,6:25:16.55:74,0,17	0/1:18,6:24:11.16:151,0,11	0/0:4,1:5:3.26:0,3,10	0/1:12,1:13:26.28:26,0,256	0/0:17,0:16:19.03:0,19,637	0/1:39,4:43:1.52:2,0,206	0/0:25,0:25:27.51:0,28,426	0/1:31,3:33:47.17:47,0,73	0/0:27,2:29:7.97:0,8,95	0/0:12,0:12:11.86:0,12,197	0/0:30,3:33:9.04:0,9,126	0/1:39,4:42:55.57:56,0,1233	0/1:26,4:28:99:107,0,470	0/1:14,1:15:29.69:30,0,121
chr10	83917258	.	C	CAT	456.35	PASS	AB=0.953;AC=10;AF=0.179;AN=56;BaseQRankSum=6.108;DP=780;FS=5.903;HRun=0;HaplotypeScore=278.8009;InbreedingCoeff=-0.0678;MQ=32.94;MQ0=10;MQRankSum=-3.887;QD=1.99;ReadPosRankSum=-0.897;VQSLOD=1.6739;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,3:19:50.83:102,0,51	0/1:14,1:15:33.12:50,0,33	0/1:18,0:3:10.01:15,0,10	0/0:17,0:3:6.84:0,7,65	0/0:38,0:38:0.43:0,0,42	0/0:21,0:21:5.88:0,6,32	0/0:19,0:19:6.29:0,6,45	0/0:35,0:30:45.26:0,45,593	0/0:35,0:35:23.29:0,23,216	0/1:50,0:47:99:102,0,756	0/0:23,0:23:2.70:0,3,15	0/0:27,0:27:18.64:0,19,211	0/0:23,0:23:2.15:0,2,100	0/0:22,0:22:14.80:0,15,154	0/0:31,0:31:6.93:0,7,60	0/1:25,2:27:16.74:142,0,17	1/1:3,2:5:3.63:59,4,0	0/1:14,2:16:99:113,0,200	0/0:22,0:20:22.15:0,22,676	0/0:47,0:47:24.17:0,24,281	0/0:35,0:34:33.99:0,34,521	0/0:42,0:41:15.08:0,15,140	0/1:33,0:33:2.87:3,0,87	0/0:15,0:15:12.02:0,12,175	0/0:49,0:49:6.82:0,7,250	0/1:46,0:45:0.64:1,0,1036	0/0:30,0:28:50.65:0,51,440	0/0:20,0:20:26.21:0,26,217
chr10	83917264	.	T	TAC	1853.67	PASS	AB=0.857;AC=16;AF=0.286;AN=56;BaseQRankSum=9.009;DP=868;FS=1.225;HRun=0;HaplotypeScore=260.5058;InbreedingCoeff=-0.2908;MQ=33.89;MQ0=15;MQRankSum=-6.448;QD=3.54;ReadPosRankSum=4.326;VQSLOD=2.2073;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:16.92:17,0,18	0/1:14,2:16:42.26:173,0,42	0/0:25,0:5:12:0,12,133	0/0:21,0:3:6:0,6,71	0/0:35,9:44:8.55:0,9,101	0/1:19,3:22:18.97:19,0,273	0/1:14,8:23:12.05:136,0,12	0/0:39,0:34:18:0,18,734	0/1:30,8:38:97.17:97,0,430	0/1:49,5:51:99:309,0,686	0/1:21,3:24:0.04:1,0,0	0/0:27,2:29:31.19:0,31,368	0/1:19,5:24:65.47:65,0,236	0/0:23,2:25:18.47:0,18,256	0/1:31,1:32:40.19:40,0,137	0/0:29,0:29:16.61:0,17,180	0/1:7,0:7:0.25:0,0,0	0/0:17,0:17:22.53:0,23,268	0/0:27,0:24:32.41:0,32,648	0/1:29,22:51:99:124,0,293	0/0:46,0:44:53.85:0,54,852	0/1:32,10:41:99:138,0,192	0/1:26,8:34:41.22:41,0,171	0/0:17,2:19:27.03:0,27,324	0/1:44,7:51:99:219,0,302	0/1:46,8:53:99:308,0,1049	0/1:19,9:28:99:317,0,358	0/0:21,0:21:53.81:0,54,582
chr10	83917274	.	CAT	C	1168.70	PASS	AB=0.916;AC=16;AF=0.286;AN=56;BaseQRankSum=7.518;DP=946;FS=11.943;HRun=0;HaplotypeScore=260.2758;InbreedingCoeff=-0.1325;MQ=34.85;MQ0=16;MQRankSum=-5.807;QD=2.43;ReadPosRankSum=-1.328;VQSLOD=0.6287;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,1:25:18.43:74,0,18	0/1:15,4:19:96.79:97,0,112	0/0:31,0:8:5:0,5,262	0/1:30,0:8:10.21:10,0,72	0/0:43,0:43:10.92:0,11,182	0/1:22,1:23:0.18:0,0,381	0/0:26,0:26:12.02:0,12,189	0/0:44,1:39:18.27:0,18,1307	0/0:40,0:40:11.82:0,12,735	0/1:49,12:58:99:498,0,891	1/1:28,3:31:2.50:12,2,0	0/0:31,0:31:40.59:0,41,614	0/0:26,1:27:36.10:0,36,538	0/0:29,0:29:32.85:0,33,478	0/1:30,2:32:6.86:7,0,179	0/1:21,8:29:99:266,0,157	1/1:8,1:9:1.03:37,1,0	0/1:15,3:18:99:189,0,332	0/0:29,1:27:6.36:0,6,1065	0/1:53,1:54:4.08:4,0,497	0/0:52,0:50:91.21:0,91,1623	0/1:41,2:42:52.62:53,0,322	0/0:35,0:35:13.04:0,13,301	0/0:21,0:21:32.77:0,33,566	0/1:49,2:51:5.79:6,0,543	0/1:51,4:54:62.24:62,0,1937	0/0:34,0:32:28.73:0,29,733	0/0:22,0:21:59.18:0,59,865
chr10	83917275	.	ATACC	A	1645.43	PASS	AB=0.967;AC=16;AF=0.286;AN=56;BaseQRankSum=7.608;DP=935;FS=0.000;HRun=0;HaplotypeScore=273.2780;InbreedingCoeff=-0.3068;MQ=35.03;MQ0=17;MQRankSum=-5.872;QD=3.18;ReadPosRankSum=0.679;VQSLOD=1.5874;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,1:25:30.31:69,0,30	0/1:19,0:19:50.70:51,0,79	0/1:31,1:9:9.71:10,0,463	0/0:30,0:9:2.05:0,2,134	0/0:43,0:43:13.95:0,14,292	0/1:22,0:22:16.93:17,0,602	0/0:26,0:26:6.70:0,7,156	0/1:35,7:39:99:246,0,1689	0/0:38,0:38:30.23:0,30,1292	0/1:59,2:58:99:572,0,1537	0/0:30,0:30:2.90:0,3,18	0/0:30,0:30:22.64:0,23,958	0/1:27,0:27:38.20:38,0,764	0/0:28,0:28:55.70:0,56,914	0/0:31,1:32:21.65:0,22,366	0/1:24,4:28:99:303,0,199	1/1:3,5:8:0.53:9,1,0	0/1:17,1:18:99:238,0,517	0/0:29,0:26:27.92:0,28,1522	0/1:53,0:53:1.74:2,0,840	0/0:51,0:49:99:0,102,2619	0/1:44,0:43:70.02:70,0,566	0/0:32,3:35:17.21:0,17,493	0/0:21,0:21:44.95:0,45,959	0/1:49,1:51:57.21:57,0,855	0/1:53,1:53:18.64:19,0,2982	0/1:34,0:32:94.62:95,0,1197	0/0:22,0:21:61.18:0,61,1334
chr10	83917282	.	TAC	T	131.39	PASS	AB=0.988;AC=11;AF=0.196;AN=56;BaseQRankSum=4.855;DP=1009;FS=0.808;HRun=0;HaplotypeScore=276.9725;InbreedingCoeff=0.0385;MQ=39.56;MQ0=18;MQRankSum=-3.575;QD=0.47;ReadPosRankSum=1.260;VQSLOD=2.4495;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:10.93:11,0,76	0/1:20,0:20:31.95:32,0,41	0/0:36,1:13:36.96:0,37,456	0/1:39,0:15:7.69:8,0,244	0/0:44,0:44:17.36:0,17,283	0/0:23,0:23:24.08:0,24,376	0/0:24,0:27:19.29:0,19,195	0/0:44,0:40:51.07:0,51,733	0/0:39,1:40:27.78:0,28,896	0/0:62,0:59:16.25:0,16,436	0/1:32,0:32:0.40:0,0,1	0/0:32,0:32:48.16:0,48,751	0/0:29,0:29:36.12:0,36,566	0/0:29,1:30:15.79:0,16,719	0/1:34,0:34:17.09:17,0,41	0/1:30,0:31:11.41:118,0,11	1/1:8,0:8:2.95:23,3,0	0/1:18,0:18:45.35:45,0,90	0/1:34,2:34:7.50:7,0,711	0/0:56,0:56:35.79:0,36,569	0/0:55,3:56:46.74:0,47,1627	0/0:47,0:46:21.03:0,21,332	0/0:36,0:36:20.83:0,21,332	0/0:23,0:23:51.13:0,51,778	0/0:52,0:53:36.10:0,36,567	0/0:60,1:59:47.82:0,48,1238	0/1:34,1:33:0.65:1,0,555	0/0:24,0:24:44.98:0,45,606
chr10	83918120	.	CT	C	2473.69	PASS	AB=0.710;AC=24;AF=0.429;AN=56;BaseQRankSum=8.552;DP=387;FS=5.551;HRun=11;HaplotypeScore=62.3233;InbreedingCoeff=0.8486;MQ=72.15;MQ0=2;MQRankSum=-7.452;QD=15.36;ReadPosRankSum=1.921;VQSLOD=4.2987;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,8:12:17.95:148,18,0	1/1:1,2:3:5.99:49,6,0	0/0:30,0:13:29.57:0,30,239	0/0:20,0:13:9.92:0,10,82	0/0:9,0:9:21.05:0,21,223	0/0:14,0:14:32.82:0,33,332	1/1:4,9:13:35.92:291,36,0	0/0:29,1:30:47.71:0,48,690	0/0:9,0:9:15.04:0,15,160	1/1:8,7:15:26.96:222,27,0	1/1:4,10:14:32.94:270,33,0	0/0:8,0:8:12.50:0,13,129	0/0:14,0:14:36.04:0,36,358	0/0:12,0:13:20.23:0,20,250	1/1:1,8:9:23.97:197,24,0	1/1:2,8:10:20.97:172,21,0	0/1:8,10:18:1.59:190,0,2	1/1:6,8:14:13.57:226,14,0	0/0:20,0:21:40.84:0,41,438	0/0:11,0:13:29.91:0,30,302	0/0:12,0:12:21.03:0,21,215	0/1:5,1:7:16.45:16,0,82	0/0:9,0:9:20.62:0,21,249	0/0:10,0:10:18.03:0,18,184	1/1:1,13:14:38.95:320,39,0	1/1:3,10:13:29.94:243,30,0	0/0:12,0:12:27.06:0,27,281	1/1:3,14:19:20.03:349,20,0
chr10	83918136	.	CTT	C	1604.30	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=4.651;DP=355;FS=0.635;HRun=10;HaplotypeScore=69.5483;InbreedingCoeff=0.8924;MQ=74.09;MQ0=2;MQRankSum=-9.445;QD=20.84;ReadPosRankSum=1.369;VQSLOD=2.8005;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,7:10:18.03:190,18,0	1/1:0,2:2:6.02:67,6,0	0/0:31,0:12:22.53:0,23,223	0/0:27,0:18:18.01:0,18,139	0/0:8,0:9:23.57:0,24,342	0/0:14,0:14:33.10:0,33,503	0/0:2,0:11:20.43:0,20,80	0/0:32,0:35:70.99:0,71,970	0/0:5,0:6:14.54:0,15,199	1/1:1,7:8:21.05:234,21,0	1/1:2,8:10:18.02:200,18,0	0/0:5,0:5:6.02:0,6,95	0/0:13,0:13:33.11:0,33,524	0/0:8,0:9:26.58:0,27,387	1/1:0,8:8:24.06:267,24,0	1/1:1,6:7:18.05:200,18,0	1/1:5,11:16:1.38:330,1,0	1/1:3,12:15:10.39:309,10,0	0/0:23,0:23:57.18:0,57,851	0/0:12,0:12:21.07:0,21,328	0/0:5,0:5:9.03:0,9,143	0/0:7,0:7:18.03:0,18,240	0/0:9,0:9:21.07:0,21,333	0/0:7,0:7:15.02:0,15,211	0/0:13,0:13:39.13:0,39,618	0/0:5,0:9:21.40:0,21,110	0/0:13,0:13:33.11:0,33,519	0/0:4,0:20:38.78:0,39,134
chr10	83918171	.	AAT	A	149.61	PASS	AB=0.881;AC=7;AF=0.130;AN=54;BaseQRankSum=2.820;DP=244;FS=13.105;HRun=0;HaplotypeScore=60.8110;InbreedingCoeff=0.0467;MQ=78.02;MQ0=4;MQRankSum=-1.590;QD=2.99;ReadPosRankSum=-0.785;VQSLOD=-0.3095;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,1:8:78.85:79,0,128	1/1:1,1:2:3.01:46,3,0	0/0:9,0:7:8.93:0,9,171	0/0:20,0:12:17.15:0,17,169	0/0:7,0:7:21.07:0,21,396	0/0:13,0:13:39.12:0,39,746	0/0:5,0:5:15:0,15,216	0/0:37,0:37:99:0,111,2122	0/0:5,0:5:15.05:0,15,300	0/0:6,0:6:15.05:0,15,302	0/1:5,0:5:3.78:4,0,182	0/0:2,0:2:6.02:0,6,108	0/0:4,0:4:12.04:0,12,215	0/0:7,0:7:21.06:0,21,370	0/0:6,0:6:12.04:0,12,239	0/1:4,2:4:36.53:37,0,127	0/1:12,3:15:91.82:92,0,509	0/1:13,1:14:11.45:11,0,526	0/0:20,0:20:54.18:0,54,992	0/0:8,0:8:24.08:0,24,451	0/0:2,0:2:6.02:0,6,121	0/0:1,0:1:3.01:0,3,61	0/0:5,0:5:15.02:0,15,231	./.	0/0:11,0:11:33.11:0,33,655	0/0:5,0:5:15.04:0,15,254	0/0:7,0:7:21.05:0,21,387	0/0:14,0:14:39.13:0,39,753
chr10	83918195	.	TTA	T	535.74	PASS	AB=1.000;AC=10;AF=0.185;AN=54;BaseQRankSum=-0.162;DP=251;FS=5.387;HRun=0;HaplotypeScore=55.8187;InbreedingCoeff=0.0566;MQ=67.06;MQ0=3;MQRankSum=0.139;QD=5.47;ReadPosRankSum=-4.158;VQSLOD=0.7297;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:15.04:0,15,206	0/0:4,0:4:11.77:0,12,77	0/0:9,0:6:14.07:0,14,145	0/0:10,0:6:9.09:0,9,81	0/0:17,0:17:48.15:0,48,700	0/0:14,0:14:41.81:0,42,662	0/1:7,0:7:2.77:3,0,187	0/1:24,0:24:83.53:84,0,197	0/0:8,0:8:24.07:0,24,315	0/1:8,0:8:7.48:7,0,158	0/0:3,0:3:8.84:0,9,58	0/0:6,0:6:18.06:0,18,245	0/0:3,0:3:9.03:0,9,123	0/0:6,0:6:18.06:0,18,259	0/0:4,0:4:12.04:0,12,177	0/0:9,0:7:20.51:0,21,157	0/0:16,0:16:39.96:0,40,374	0/0:17,0:17:42.12:0,42,561	0/1:15,0:15:74.57:75,0,103	0/1:8,0:8:30.68:31,0,97	0/1:2,0:2:3.26:3,0,10	0/0:7,0:7:21.03:0,21,259	0/0:4,0:4:12.04:0,12,157	./.	1/1:3,10:13:35.92:417,36,0	0/1:8,0:8:2.59:3,0,60	0/0:9,0:9:17.18:0,17,116	0/1:13,0:13:20.08:49,0,20
chr10	83918197	.	A	ATTTATTTATTTATTTT	5334.71	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=2.952;DP=258;FS=0.000;HRun=0;HaplotypeScore=125.0934;InbreedingCoeff=0.1247;MQ=69.32;MQ0=2;MQRankSum=-3.356;QD=32.53;ReadPosRankSum=-0.002;VQSLOD=3.8037;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:6:32.83:130,0,33	1/1:4,0:4:12.01:185,12,0	0/0:9,0:6:12.03:0,12,141	0/0:9,0:7:10.41:0,10,99	0/0:17,0:17:47.85:0,48,930	0/0:14,0:14:27.02:0,27,1168	0/0:6,0:6:17.97:0,18,148	0/1:22,0:22:99:154,0,581	0/0:8,0:8:23.99:0,24,396	1/1:8,0:8:24.05:811,24,0	1/1:2,2:9:20.85:552,21,0	0/0:10,0:10:20.95:0,21,347	0/0:3,0:3:9:0,9,190	0/0:6,0:6:18.02:0,18,374	0/1:4,0:4:37.90:300,0,38	1/1:9,0:7:21.04:449,21,0	1/1:14,2:16:48.09:2075,48,0	0/1:17,0:17:99:270,0,198	0/1:15,0:15:78.84:79,0,502	0/1:9,0:9:54.68:55,0,309	0/1:2,0:2:20.98:21,0,99	0/0:7,0:7:20.99:0,21,288	0/0:4,0:4:12:0,12,119	0/1:2,0:2:0:0,0,0	0/1:15,0:15:39.52:40,0,181	0/1:8,0:8:62.90:63,0,145	0/1:9,0:9:99:136,0,186	0/1:9,0:9:14.47:14,0,164
chr10	83919504	.	CTAGAA	C	735.30	PASS	AB=0.600;AC=3;AF=0.054;AN=56;BaseQRankSum=5.364;DP=469;FS=19.206;HRun=0;HaplotypeScore=86.0934;InbreedingCoeff=0.4002;MQ=81.25;MQ0=0;MQRankSum=-5.638;QD=40.85;ReadPosRankSum=-0.842;VQSLOD=1.8691;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.24:0,69,2143	0/0:4,0:4:12.04:0,12,336	0/0:6,0:6:14.88:0,15,333	0/0:19,0:19:51.17:0,51,1192	0/0:2,0:2:6.02:0,6,191	0/0:2,0:2:6.02:0,6,188	0/0:23,0:23:66.21:0,66,2050	0/0:20,0:20:60.21:0,60,1938	0/0:26,0:26:75.26:0,75,2411	0/0:12,0:12:36.11:0,36,1093	0/0:2,0:2:6.02:0,6,193	0/0:27,0:27:78.27:0,78,2517	0/0:27,0:27:81.28:0,81,2608	0/0:19,0:19:57.20:0,57,1835	0/0:14,0:14:39.13:0,39,1249	0/0:7,0:7:21.07:0,21,679	0/0:29,0:29:87.30:0,87,2767	0/0:37,0:37:99:0,111,3587	0/0:16,0:16:48.15:0,48,1395	0/0:5,0:5:15.04:0,15,411	0/0:67,0:67:99:0,199,6060	0/0:5,0:5:15.05:0,15,482	0/0:1,0:1:3.01:0,3,97	0/0:35,0:35:99:0,105,3306	0/0:5,0:5:15.05:0,15,481	0/1:5,10:15:99:633,0,158	0/0:18,0:18:54.19:0,54,1689	1/1:0,3:3:9.03:199,9,0
chr10	83919648	.	A	AATG	196.83	PASS	AB=1.000;AC=11;AF=0.458;AN=24;BaseQRankSum=0.887;DP=28;FS=14.423;HRun=0;HaplotypeScore=10.9345;InbreedingCoeff=0.3444;MQ=86.79;MQ0=2;MQRankSum=-0.803;QD=15.14;ReadPosRankSum=1.141;VQSLOD=0.9844;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	1/1:2,0:1:2.37:8,2,0	0/1:5,0:4:7.08:7,0,76	0/0:1,0:1:3.01:0,3,56	./.	./.	./.	0/0:3,0:3:9.03:0,9,133	./.	1/1:2,0:2:6:75,6,0	./.	./.	./.	./.	./.	./.	1/1:0,2:2:3.01:73,3,0	0/0:1,0:1:3.01:0,3,47	./.	./.	0/0:2,0:2:6.02:0,6,94	0/0:2,0:2:6.02:0,6,112	0/0:1,0:1:3.01:0,3,56	1/1:1,0:1:3.01:61,3,0	1/1:0,1:1:3.01:73,3,0	./.	./.
chr10	83920367	.	T	TC	1055.44	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.825;DP=581;FS=0.672;HRun=8;HaplotypeScore=62.7367;InbreedingCoeff=0.9828;MQ=81.62;MQ0=0;MQRankSum=-0.661;QD=26.39;ReadPosRankSum=2.342;VQSLOD=4.4451;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,99,906	0/0:8,0:8:23.89:0,24,201	0/0:22,0:22:12.54:0,13,299	0/0:16,0:16:25.48:0,25,203	0/0:20,0:20:33:0,33,302	0/0:11,0:11:33.02:0,33,301	0/0:4,0:24:32.59:0,33,96	0/0:21,0:21:29.96:0,30,274	0/0:23,0:23:63.03:0,63,575	0/0:25,0:25:69.04:0,69,631	0/0:15,0:15:36:0,36,325	0/0:18,0:18:54.03:0,54,494	0/0:19,0:19:54.01:0,54,490	0/0:19,0:19:54.02:0,54,491	1/1:1,17:18:45.13:519,45,0	0/0:23,0:23:54:0,54,490	0/0:40,0:40:99:0,102,933	1/1:1,21:21:57.17:658,57,0	0/0:20,0:20:32.97:0,33,296	0/0:16,0:16:41.97:0,42,375	0/0:19,0:19:54.03:0,54,494	0/0:12,0:12:33.01:0,33,302	0/0:15,0:15:38.97:0,39,349	0/0:27,0:27:69.03:0,69,631	0/0:20,0:20:57.02:0,57,521	0/0:31,0:31:81.03:0,81,741	0/0:25,0:25:72.03:0,72,659	0/0:10,0:10:30.02:0,30,274
chr10	83921271	.	ACTC	A	1378.99	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.295;DP=647;FS=11.104;HRun=0;HaplotypeScore=92.3635;InbreedingCoeff=0.9697;MQ=84.49;MQ0=0;MQRankSum=-5.741;QD=47.55;ReadPosRankSum=0.507;VQSLOD=5.4346;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:78.27:0,78,1821	0/0:15,0:15:45.13:0,45,1013	0/0:22,0:22:60.19:0,60,1314	0/0:21,0:21:57.20:0,57,1260	0/0:14,0:14:39.13:0,39,918	0/0:23,0:23:57.20:0,57,1317	1/1:0,29:29:87.30:1474,87,0	0/0:22,0:22:54.19:0,54,1277	0/0:20,0:20:54.19:0,54,1276	0/0:27,0:26:66.23:0,66,1543	0/0:5,0:5:12.04:0,12,284	0/0:21,0:21:60.21:0,60,1415	0/0:21,0:21:57.20:0,57,1347	0/0:35,0:35:96.33:0,96,2270	0/0:37,0:37:99:0,105,2484	0/0:31,0:31:93.31:0,93,2111	0/0:30,0:30:87.30:0,87,2031	0/0:32,0:32:96.33:0,96,2241	0/0:18,0:18:51.16:0,51,1142	0/0:18,0:18:47.67:0,48,1128	0/0:36,0:36:99:0,102,2319	0/0:18,0:18:45.15:0,45,1064	0/0:15,0:15:42.14:0,42,989	0/0:25,0:25:75.21:0,75,1697	0/0:14,0:14:30.10:0,30,709	0/0:24,0:24:72.24:0,72,1643	0/0:27,0:27:81.26:0,81,1868	0/0:15,0:15:45.15:0,45,1063
chr10	83922091	.	TA	T	9353.24	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=11.426;DP=664;FS=3.857;HRun=4;HaplotypeScore=77.3585;InbreedingCoeff=0.9985;MQ=84.14;MQ0=0;MQRankSum=-2.080;QD=32.03;ReadPosRankSum=3.034;VQSLOD=5.5720;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,52:55:99:1727,144,0	1/1:0,6:6:18.05:214,18,0	0/0:25,0:25:31.41:0,31,746	0/0:15,0:15:39:0,39,471	0/0:19,0:19:51.17:0,51,714	0/0:20,0:20:57.19:0,57,798	1/1:0,29:29:81.25:972,81,0	0/0:29,0:29:78.25:0,78,1078	0/0:16,0:16:48.15:0,48,654	1/1:0,24:24:69.21:828,69,0	1/1:0,12:12:33.10:393,33,0	0/0:29,0:29:81.26:0,81,1119	0/0:20,0:20:60.15:0,60,797	0/0:26,0:26:75.24:0,75,1035	1/1:0,18:18:51.16:612,51,0	1/1:2,25:27:69.21:828,69,0	1/1:2,50:52:99:1656,138,0	1/1:0,20:20:45.01:540,45,0	0/0:25,0:25:66.21:0,66,908	0/0:16,0:16:45.15:0,45,622	0/0:36,0:36:99:0,99,1370	0/0:15,0:15:42.14:0,42,588	0/0:24,0:24:72.20:0,72,978	0/0:37,0:37:99:0,108,1512	1/1:2,17:19:51.16:612,51,0	1/1:2,20:22:57.17:683,57,0	0/0:20,0:20:51.17:0,51,714	1/1:0,8:8:24.07:288,24,0
chr10	83922473	.	CCACA	C	3937.93	PASS	AB=0.952;AC=11;AF=0.196;AN=56;BaseQRankSum=12.477;DP=629;FS=2.753;HRun=0;HaplotypeScore=118.2892;InbreedingCoeff=0.9071;MQ=84.56;MQ0=0;MQRankSum=-4.603;QD=37.50;ReadPosRankSum=2.875;VQSLOD=3.6521;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,3527	1/1:2,10:12:24.08:460,24,0	0/0:29,0:29:76.12:0,76,1966	0/0:23,0:23:53.94:0,54,1377	0/0:17,0:17:51.17:0,51,1294	0/0:21,0:21:57.20:0,57,1523	0/0:27,0:27:81.28:0,81,2190	0/0:23,0:23:69.22:0,69,1746	0/0:23,0:23:69.22:0,69,1803	1/1:0,18:18:48.16:929,48,0	1/1:0,5:5:6.02:116,6,0	0/0:35,0:35:99:0,102,2713	0/0:21,0:21:60.21:0,60,1642	0/0:22,0:22:66.23:0,66,1722	0/0:24,1:25:17.07:0,17,1854	1/1:1,24:25:63.22:1211,63,0	1/1:0,25:25:63.22:1221,63,0	0/0:22,0:22:63.22:0,63,1726	0/0:23,0:23:66.20:0,66,1691	0/0:17,0:17:48.16:0,48,1308	0/0:39,0:39:99:0,114,3046	0/0:13,0:13:27.08:0,27,681	0/0:9,0:9:24.03:0,24,657	0/0:25,0:25:72.25:0,72,1972	0/0:23,0:23:69.22:0,69,1820	0/1:19,1:20:0.84:1,0,1386	0/0:35,0:35:96.33:0,96,2627	0/0:7,0:7:21.07:0,21,575
chr10	83922594	.	AC	A	2219.56	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.482;DP=619;FS=0.958;HRun=7;HaplotypeScore=68.2459;InbreedingCoeff=0.9992;MQ=80.66;MQ0=0;MQRankSum=-2.507;QD=22.88;ReadPosRankSum=2.679;VQSLOD=3.9508;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:32:75.17:765,75,0	0/0:8,0:8:24.08:0,24,302	0/0:18,0:18:45.05:0,45,529	0/0:22,1:23:43.78:0,44,492	0/0:24,0:24:66.20:0,66,813	0/0:20,0:20:51.16:0,51,640	0/0:27,0:27:75.22:0,75,929	0/0:17,0:17:45.10:0,45,548	0/0:14,0:14:39.12:0,39,490	0/0:12,0:12:33.11:0,33,415	0/0:16,0:16:36.12:0,36,453	0/0:33,0:33:96.30:0,96,1193	0/0:13,0:13:39.12:0,39,488	0/0:23,0:23:69.21:0,69,851	1/1:1,15:16:45.10:459,45,0	0/0:26,0:26:75.24:0,75,943	0/0:37,0:37:99:0,99,1245	1/1:4,27:31:43.46:758,43,0	0/0:18,0:18:51.15:0,51,621	0/0:25,0:25:72.21:0,72,879	0/0:32,0:32:93.29:0,93,1157	0/0:27,0:27:75.23:0,75,928	0/0:17,0:17:45.13:0,45,542	0/0:26,0:26:69.21:0,69,855	1/1:2,16:18:39.09:398,39,0	0/0:24,0:24:57.17:0,57,705	0/0:22,0:22:60.18:0,60,740	0/0:20,0:20:54.16:0,54,665
chr10	83922873	.	CAT	C	6097.36	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.049;DP=623;FS=3.133;HRun=0;HaplotypeScore=92.7527;InbreedingCoeff=0.9991;MQ=85.34;MQ0=0;MQRankSum=-5.978;QD=35.87;ReadPosRankSum=3.387;VQSLOD=6.9878;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,54:55:99:1557,102,0	1/1:2,8:10:21.07:320,21,0	0/0:18,0:18:54.16:0,54,996	0/0:27,0:27:41.76:0,42,1143	0/0:26,0:26:78.21:0,78,1335	0/0:18,0:18:54.14:0,54,941	1/1:0,19:19:48.16:734,48,0	0/0:29,0:29:84.25:0,84,1484	0/0:18,0:18:54.13:0,54,939	1/1:2,21:23:69.17:1012,69,0	1/1:4,13:17:42.10:576,42,0	0/0:16,0:16:48.16:0,48,889	0/0:15,0:15:45.11:0,45,768	0/0:27,0:27:78.27:0,78,1465	0/0:20,0:20:60.17:0,60,1031	1/1:0,17:17:51.14:735,51,0	1/1:3,26:28:81.20:1163,81,0	0/0:41,0:41:99:0,111,1946	0/0:21,0:21:60.15:0,60,1008	0/0:22,0:22:59.89:0,60,1079	0/0:27,0:27:81.09:0,81,1399	0/0:17,0:17:44.71:0,45,746	0/0:13,0:13:36.09:0,36,627	0/0:31,0:31:90.26:0,90,1663	0/0:21,0:21:60.16:0,60,1013	0/0:18,0:18:51.09:0,51,844	0/0:18,0:18:48.16:0,48,896	0/0:10,0:10:29.97:0,30,327
chr10	83922942	.	T	TG	3710.96	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.639;DP=699;FS=1.781;HRun=6;HaplotypeScore=86.6293;InbreedingCoeff=0.9993;MQ=78.51;MQ0=0;MQRankSum=-3.483;QD=29.93;ReadPosRankSum=1.566;VQSLOD=4.1948;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:81.16:0,81,819	1/1:0,10:10:23.99:301,24,0	0/0:18,0:18:38.96:0,39,365	0/0:19,0:19:30.01:0,30,332	0/0:38,0:38:99:0,108,1093	0/0:25,0:25:69.06:0,69,684	0/0:26,0:26:75.16:0,75,758	0/0:40,0:40:99:0,99,996	0/0:13,0:13:36.07:0,36,361	1/1:4,27:31:87.26:1073,87,0	1/1:2,17:20:44.97:524,45,0	0/0:30,0:30:81.17:0,81,820	0/0:20,0:20:54.10:0,54,543	0/0:19,0:19:45.06:0,45,444	0/0:19,0:19:51.11:0,51,515	1/1:4,25:29:69.15:848,69,0	1/1:5,29:33:78.23:965,78,0	0/0:29,0:29:78.18:0,78,795	0/0:19,0:19:57.10:0,57,564	0/0:20,0:20:54.08:0,54,531	0/0:31,0:31:87.16:0,87,878	0/0:20,0:21:56.16:0,56,556	0/0:26,0:26:75.16:0,75,758	0/0:16,0:16:45.08:0,45,451	0/0:31,0:31:87.10:0,87,854	0/0:24,0:24:66.08:0,66,656	0/0:31,0:31:81.11:0,81,795	0/0:18,0:18:54.07:0,54,538
chr10	83923131	.	T	TTTG	1820	PASS	AC=2;AF=0.050;AN=40;BaseQRankSum=-7.691;DP=418;FS=0.686;HRun=0;HaplotypeScore=58.9789;InbreedingCoeff=0.8274;MQ=70.28;MQ0=1;MQRankSum=-0.488;QD=42.33;ReadPosRankSum=3.386;VQSLOD=4.8372;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,36:43:93.32:1912,93,0	./.	0/0:10,0:8:18.06:0,18,240	0/0:15,0:14:14.17:0,14,218	0/0:12,0:12:33.08:0,33,442	0/0:22,0:22:57.13:0,57,774	./.	0/0:28,0:28:54.11:0,54,788	0/0:18,0:18:33.09:0,33,462	./.	./.	0/0:20,0:20:54.18:0,54,788	0/0:18,0:18:36.10:0,36,501	0/0:19,0:19:45.11:0,45,601	0/0:19,0:19:45.13:0,45,621	0/0:1,0:1:3.01:0,3,44	./.	0/0:29,0:29:78.22:0,78,1113	0/0:21,0:19:36.11:0,36,510	0/0:19,0:19:44.99:0,45,586	0/0:16,0:16:42.12:0,42,592	0/0:22,0:22:60.19:0,60,842	0/0:16,0:16:39.11:0,39,527	0/0:34,0:34:87.22:0,87,1172	./.	./.	0/0:25,0:25:48.12:0,48,641	./.
chr10	83923647	.	G	GA	1638.06	PASS	AB=0.822;AC=14;AF=0.250;AN=56;BaseQRankSum=-5.911;DP=527;FS=0.461;HRun=11;HaplotypeScore=73.7417;InbreedingCoeff=0.4071;MQ=86.69;MQ0=1;MQRankSum=0.195;QD=8.40;ReadPosRankSum=-0.752;VQSLOD=2.3413;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,25:32:26.92:490,27,0	0/1:1,6:7:7.65:107,0,8	0/1:25,0:18:19.60:20,0,70	0/1:39,0:32:3.98:4,0,96	0/1:9,2:12:28.95:29,0,160	0/0:17,0:17:41.80:0,42,325	0/0:1,0:31:42.78:0,43,124	0/0:23,0:23:53.77:0,54,418	0/0:12,1:13:2.28:0,2,192	1/1:6,16:23:53.87:512,54,0	1/1:5,4:9:16.58:156,17,0	0/0:22,1:23:26.30:0,26,387	0/1:9,0:9:20.26:20,0,134	0/0:19,1:20:14.84:0,15,295	0/0:16,0:16:40.64:0,41,307	1/1:2,7:9:12.02:122,12,0	0/1:7,16:25:56.44:353,0,56	0/0:25,0:26:58.77:0,59,443	0/0:20,1:21:22.12:0,22,340	0/0:7,0:7:14.92:0,15,116	0/0:15,1:16:5.41:0,5,223	0/0:14,0:14:38.85:0,39,302	0/0:10,0:12:16.94:0,17,119	0/0:34,0:34:86.66:0,87,673	0/0:1,0:9:16.28:0,16,47	0/0:5,0:18:25.67:0,26,74	0/0:21,0:21:38.80:0,39,301	0/0:2,0:11:15.21:0,15,59
chr10	83924355	.	TC	T	729.40	PASS	AB=0.876;AC=13;AF=0.250;AN=52;BaseQRankSum=7.851;DP=545;FS=0.000;HRun=2;HaplotypeScore=99.8492;InbreedingCoeff=0.0008;MQ=36.38;MQ0=129;MQRankSum=-3.942;QD=3.78;ReadPosRankSum=-0.926;VQSLOD=-0.0671;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,2:10:53.15:53,0,84	1/1:2,1:1:3.01:39,3,0	./.	./.	0/0:14,0:13:29.99:0,30,416	0/0:32,0:21:39.39:0,39,678	0/1:9,7:14:99:133,0,108	0/0:31,0:22:47.70:0,48,465	0/0:23,0:16:45.04:0,45,640	0/1:10,3:6:82.69:98,0,83	1/1:7,6:7:8.89:92,9,0	0/0:28,0:23:57.12:0,57,778	0/0:29,0:23:62.88:0,63,876	0/0:17,0:11:27.09:0,27,399	0/1:21,11:26:59.38:340,0,59	0/1:8,1:5:26.86:27,0,84	0/1:16,2:11:38.35:38,0,51	0/1:15,1:4:30.41:30,0,41	0/0:18,0:9:23.94:0,24,230	0/0:11,0:11:32.55:0,33,235	0/0:22,0:15:31.45:0,31,256	0/0:24,0:17:39.13:0,39,584	0/0:15,0:14:39.52:0,40,548	0/0:40,0:25:63.21:0,63,930	0/1:20,0:16:12.83:13,0,47	0/1:24,1:19:17.45:17,0,219	0/0:20,0:12:35.64:0,36,282	0/0:26,2:15:6.01:0,6,118
chr10	83924378	.	TTCC	T	266.31	PASS	AB=0.950;AC=7;AF=0.125;AN=56;BaseQRankSum=6.736;DP=512;FS=7.647;HRun=0;HaplotypeScore=116.1637;InbreedingCoeff=0.0824;MQ=44.30;MQ0=53;MQRankSum=-4.364;QD=3.29;ReadPosRankSum=-2.045;VQSLOD=1.5046;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:14:39.06:0,39,612	1/1:3,0:2:5.92:39,6,0	0/0:11,0:4:2.04:0,2,89	0/0:10,0:4:12:0,12,179	0/0:18,0:18:30.74:0,31,910	0/0:29,0:24:66.23:0,66,1438	0/1:14,3:15:96.36:154,0,96	0/0:35,0:29:72.21:0,72,1403	0/0:20,0:16:48.16:0,48,1079	0/0:13,0:10:2.33:0,2,252	0/0:11,0:7:8.99:0,9,77	0/0:29,0:27:72.19:0,72,1361	0/0:22,0:19:57.17:0,57,1153	0/0:16,0:11:33.07:0,33,678	0/1:29,0:26:95.49:95,0,134	0/1:7,0:5:10.99:11,0,91	0/1:16,0:14:52.41:52,0,87	0/1:8,1:4:41.79:42,0,48	0/0:13,0:8:20.97:0,21,283	0/0:13,0:13:35.88:0,36,660	0/0:21,0:20:26.13:0,26,895	0/0:20,0:19:54.18:0,54,1135	0/0:14,0:14:42.14:0,42,928	0/0:34,0:25:72.71:0,73,1524	0/0:17,0:17:36.11:0,36,733	0/0:24,0:19:57.14:0,57,1113	0/0:15,0:12:33.02:0,33,554	0/0:22,0:16:42.14:0,42,895
chr10	83924442	.	CTCT	C	578.61	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.679;DP=663;FS=18.657;HRun=0;HaplotypeScore=118.5029;InbreedingCoeff=0.9484;MQ=47.20;MQ0=22;MQRankSum=1.274;QD=22.25;ReadPosRankSum=2.484;VQSLOD=2.3377;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:42.74:0,43,748	0/0:6,0:6:18.06:0,18,395	0/0:62,0:11:12.04:0,12,286	0/0:91,0:11:21.03:0,21,344	0/0:21,0:21:63.16:0,63,1143	0/0:17,0:17:44.78:0,45,745	0/0:29,0:28:64.62:0,65,1015	0/0:25,0:21:43.43:0,43,716	0/0:17,0:17:45.13:0,45,908	0/0:18,0:17:48.11:0,48,907	0/0:15,0:15:45.08:0,45,774	0/0:22,0:22:22.71:0,23,904	0/0:12,0:11:25.16:0,25,470	0/0:14,0:12:23.75:0,24,607	0/0:32,0:31:85.96:0,86,1544	0/0:23,0:23:69.14:0,69,1331	0/0:26,0:23:63.20:0,63,1306	0/0:11,0:11:33.09:0,33,644	0/0:12,0:9:21.06:0,21,425	0/0:13,0:13:29.95:0,30,531	0/0:31,0:31:78.23:0,78,1635	0/0:23,0:22:66.23:0,66,1393	0/0:17,0:17:48.08:0,48,844	0/0:28,0:25:43.23:0,43,1213	1/1:2,24:26:42.14:673,42,0	0/0:21,0:19:57.02:0,57,1047	0/0:13,0:13:36.10:0,36,694	0/0:20,0:20:48.12:0,48,898
chr10	83924555	.	C	CCTTT	7354.44	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=11.730;DP=540;FS=27.665;HRun=0;HaplotypeScore=128.1799;InbreedingCoeff=0.7795;MQ=56.02;MQ0=1;MQRankSum=-12.305;QD=32.83;ReadPosRankSum=-3.334;VQSLOD=2.6875;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,13:29:65.97:1106,66,0	1/1:6,2:9:24:396,24,0	0/1:24,0:14:9.25:9,0,394	0/0:18,0:10:18:0,18,214	0/0:29,0:29:78.25:0,78,1360	0/0:19,0:19:50.19:0,50,843	1/1:14,6:20:44.94:821,45,0	0/0:17,0:17:33.09:0,33,504	0/0:24,0:24:60.17:0,60,1012	1/1:19,6:25:66.19:1328,66,0	1/1:6,2:8:18.06:372,18,0	0/0:19,0:19:45.15:0,45,777	0/0:16,0:16:48.15:0,48,823	0/0:21,0:20:60.17:0,60,1017	1/1:13,4:17:39.09:744,39,0	1/1:16,1:17:48.02:821,48,0	1/1:18,5:24:54.18:1215,54,0	1/1:11,1:12:13.46:469,13,0	0/0:13,0:12:33.10:0,33,563	0/0:21,0:21:57.20:0,57,1023	0/0:21,0:20:51.16:0,51,879	0/0:22,0:22:63.17:0,63,1050	0/0:9,0:9:21.06:0,21,330	0/0:29,0:29:82.49:0,82,1351	0/1:18,0:18:9.49:9,0,109	0/1:21,0:21:62.94:63,0,622	0/0:25,0:25:69.05:0,69,1169	0/0:12,0:12:36.12:0,36,556
chr10	83924569	.	T	TTCC	1094.29	PASS	AB=0.959;AC=9;AF=0.161;AN=56;BaseQRankSum=9.208;DP=516;FS=8.853;HRun=0;HaplotypeScore=138.2445;InbreedingCoeff=0.1252;MQ=49.81;MQ0=1;MQRankSum=-8.707;QD=8.05;ReadPosRankSum=-0.928;VQSLOD=2.6573;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:29.82:0,30,368	0/0:9,0:9:4.69:0,5,161	0/0:18,0:10:30.10:0,30,448	0/0:14,0:4:8.81:0,9,92	0/0:29,0:29:87.27:0,87,1371	0/0:17,0:18:39.74:0,40,794	0/1:14,3:17:1.57:438,0,2	0/0:10,0:10:18.05:0,18,273	0/0:20,0:20:60.15:0,60,903	0/1:23,0:23:98.68:99,0,241	0/1:6,0:6:28.86:57,0,29	0/0:21,0:21:60.18:0,60,912	0/0:16,0:16:42.13:0,42,664	0/0:24,0:23:66.20:0,66,1028	0/1:16,0:16:52.91:193,0,53	0/1:18,0:18:41.79:42,0,352	0/1:22,0:24:99:116,0,123	0/1:14,1:15:28.81:213,0,29	0/0:15,0:14:42.13:0,42,621	0/0:20,0:20:51.16:0,51,808	0/0:19,0:19:54.15:0,54,813	0/0:22,0:22:63.22:0,63,1022	0/0:11,0:11:33.09:0,33,486	0/0:30,0:30:84.25:0,84,1298	1/1:17,0:17:11.87:80,12,0	0/0:18,0:18:48.06:0,48,663	0/0:27,0:27:78.14:0,78,1167	0/0:8,0:8:20.80:0,21,142
chr10	83924572	.	C	CTTCCTTCT	1248.54	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=8.422;DP=515;FS=1.696;HRun=0;HaplotypeScore=186.1401;InbreedingCoeff=0.1946;MQ=49.96;MQ0=2;MQRankSum=-7.659;QD=7.34;ReadPosRankSum=-1.999;VQSLOD=2.5598;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:14.44:0,14,556	0/1:8,0:8:17.58:18,0,130	0/0:19,0:10:27.05:0,27,346	0/0:12,0:3:5.98:0,6,48	0/0:30,0:30:87.09:0,87,1476	0/0:19,0:19:48.10:0,48,1210	0/1:10,0:17:31.43:175,0,31	0/0:8,0:8:18.04:0,18,268	0/0:20,0:20:51.06:0,51,1094	0/1:22,0:22:94.03:94,0,109	1/1:5,0:5:6.79:81,7,0	0/0:21,0:21:60.10:0,60,1029	0/0:16,0:16:45.12:0,45,1055	0/0:24,0:23:69.15:0,69,1425	0/1:9,0:16:34.49:34,0,261	0/1:17,0:17:66.67:67,0,210	0/1:24,0:24:37.04:178,0,37	0/1:12,0:16:55.35:55,0,162	0/0:14,0:14:35.93:0,36,441	0/0:19,0:19:48.04:0,48,864	0/0:18,0:18:48.10:0,48,875	0/0:22,0:22:66.14:0,66,1307	0/0:11,0:11:33.06:0,33,648	0/0:33,0:33:61.97:0,62,1752	1/1:0,17:21:12.04:527,12,0	0/1:17,0:17:14.71:15,0,303	0/0:27,0:27:78.12:0,78,1458	1/1:7,0:7:20.97:172,21,0
chr10	83924575	.	CT	C	2968.96	PASS	AB=0.814;AC=17;AF=0.304;AN=56;BaseQRankSum=14.285;DP=503;FS=11.179;HRun=3;HaplotypeScore=110.3698;InbreedingCoeff=0.7232;MQ=49.76;MQ0=3;MQRankSum=-11.667;QD=17.78;ReadPosRankSum=-1.381;VQSLOD=2.2581;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,23:30:79.11:900,79,0	0/1:5,3:8:4.39:109,0,4	0/0:17,0:9:21.07:0,21,297	0/0:11,0:2:3.01:0,3,43	0/0:30,0:30:84.27:0,84,1178	0/0:19,0:19:51.17:0,51,768	1/1:14,0:15:0.06:269,0,0	0/0:7,0:7:15.05:0,15,213	0/0:18,0:18:54.16:0,54,737	1/1:9,12:21:47.73:437,48,0	1/1:1,4:5:14.98:137,15,0	0/0:20,0:20:57.18:0,57,793	0/0:16,0:16:45.14:0,45,628	0/0:25,0:24:66.21:0,66,927	1/1:8,7:15:39.09:430,39,0	1/1:9,8:17:19.86:241,20,0	0/1:16,7:23:4.72:346,0,5	1/1:7,8:15:4.50:284,4,0	0/0:15,0:13:35.38:0,35,482	0/0:20,0:20:32.47:0,32,712	0/0:17,0:16:44.39:0,44,621	0/0:22,0:22:66.19:0,66,906	0/0:13,0:13:39.07:0,39,518	0/0:31,0:31:90.30:0,90,1289	0/0:20,0:20:14.89:0,15,125	0/1:17,1:18:0.86:1,0,218	0/0:28,0:28:78.26:0,78,1108	0/0:7,0:7:20.80:0,21,143
chr10	83924579	.	CT	C	2112.94	PASS	AB=0.869;AC=15;AF=0.268;AN=56;BaseQRankSum=14.605;DP=496;FS=10.333;HRun=3;HaplotypeScore=112.7717;InbreedingCoeff=0.6871;MQ=49.31;MQ0=3;MQRankSum=-13.227;QD=14.18;ReadPosRankSum=0.563;VQSLOD=2.0965;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,2:31:99:227,0,112	1/1:3,4:7:18.78:131,19,0	0/0:14,0:7:18.06:0,18,253	0/0:11,0:2:5.98:0,6,63	0/0:30,0:30:81.27:0,81,1154	0/0:19,0:19:53.94:0,54,757	0/1:13,0:14:20.03:117,0,20	0/0:8,0:8:18.06:0,18,250	0/0:17,0:17:51.17:0,51,729	1/1:15,6:21:53.51:414,54,0	1/1:4,1:5:14.16:117,14,0	0/0:18,0:18:54.18:0,54,773	0/0:15,0:15:45.14:0,45,631	0/0:25,0:24:69.22:0,69,965	1/1:14,0:14:38.77:417,39,0	1/1:8,8:16:44.21:292,44,0	0/1:14,8:22:12.42:344,0,12	1/1:19,0:19:6.29:241,6,0	0/0:14,0:13:33.04:0,33,465	0/0:21,0:21:60.15:0,60,831	0/0:19,0:18:51.03:0,51,669	0/0:20,0:20:54.18:0,54,768	0/0:13,0:13:39.13:0,39,560	0/0:31,0:31:93.30:0,93,1316	0/0:20,0:20:15.04:0,15,175	0/0:18,1:19:21.72:0,22,636	0/0:25,0:25:66.22:0,66,949	0/0:8,0:8:24.03:0,24,274
chr10	83924583	.	CT	C	585.41	PASS	AB=0.940;AC=9;AF=0.161;AN=56;BaseQRankSum=10.231;DP=503;FS=0.546;HRun=3;HaplotypeScore=118.8733;InbreedingCoeff=0.4480;MQ=50.54;MQ0=3;MQRankSum=-8.338;QD=6.58;ReadPosRankSum=2.323;VQSLOD=0.6016;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:31:38.14:0,38,717	0/1:6,0:6:11.23:40,0,11	0/0:13,2:8:21.04:0,21,276	0/0:13,0:3:5.65:0,6,83	0/0:30,0:30:81.25:0,81,1120	0/0:18,0:18:54.18:0,54,774	0/1:16,0:16:4.56:5,0,133	0/0:6,0:6:18.06:0,18,253	0/0:19,0:19:57.17:0,57,792	1/1:19,3:22:0.09:267,0,0	1/1:5,0:5:1.65:33,2,0	0/0:19,0:19:57.18:0,57,798	0/0:16,0:16:48.11:0,48,663	0/0:24,0:23:66.22:0,66,941	0/0:15,0:15:13.55:0,14,113	1/1:17,0:17:31.47:234,31,0	0/1:18,5:23:66.31:140,0,66	0/0:18,0:18:35.26:0,35,246	0/0:16,0:14:36.05:0,36,501	0/0:21,0:21:60.16:0,60,825	0/0:18,0:17:48.07:0,48,678	0/0:18,0:18:51.17:0,51,730	0/0:13,0:13:39.13:0,39,560	0/0:32,0:32:96.32:0,96,1369	0/0:23,0:23:27:0,27,284	0/0:20,0:20:33.14:0,33,698	0/0:22,0:22:66.22:0,66,948	0/0:7,0:7:21.07:0,21,296
chr10	83924594	.	TCTTTCTTC	T	4311.40	PASS	AB=0.970;AC=18;AF=0.321;AN=56;BaseQRankSum=12.377;DP=527;FS=0.000;HRun=0;HaplotypeScore=176.6756;InbreedingCoeff=0.6516;MQ=53.92;MQ0=2;MQRankSum=-9.149;QD=20.93;ReadPosRankSum=-0.209;VQSLOD=4.2017;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:15.56:16,0,650	1/1:5,1:6:16.87:271,17,0	0/0:15,0:10:25.45:0,25,293	0/0:16,0:7:6.38:0,6,143	0/0:27,0:27:72.09:0,72,1888	0/0:20,0:20:57.17:0,57,1867	1/1:15,2:17:39.18:587,39,0	0/0:7,0:7:21.02:0,21,334	0/0:22,0:22:66.12:0,66,1823	1/1:14,6:20:53.68:886,54,0	1/1:6,2:8:23.83:284,24,0	0/0:18,0:18:54.15:0,54,1814	0/0:17,0:17:50.17:0,50,1679	0/0:26,0:25:75.20:0,75,2335	1/1:15,0:15:27.11:220,27,0	1/1:14,7:21:63.07:998,63,0	0/1:22,2:25:49.66:457,0,50	1/1:20,0:20:17.12:392,17,0	0/0:14,0:12:26.17:0,26,555	0/0:26,0:26:75.10:0,75,1463	0/0:16,0:16:45.13:0,45,1259	0/0:18,0:18:54.08:0,54,1740	0/0:17,0:17:48.04:0,48,1454	0/0:30,0:30:86.75:0,87,2838	0/1:23,0:23:49:49,0,69	0/1:19,1:20:99:151,0,718	0/0:25,0:25:75.15:0,75,2205	0/0:7,0:7:11.97:0,12,104
chr10	83924598	.	TCTTC	T	4433.98	PASS	AB=0.978;AC=20;AF=0.357;AN=56;BaseQRankSum=13.457;DP=523;FS=3.680;HRun=0;HaplotypeScore=134.1869;InbreedingCoeff=0.5325;MQ=56.61;MQ0=2;MQRankSum=-10.938;QD=19.62;ReadPosRankSum=-1.969;VQSLOD=4.0906;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:31:17.30:261,0,17	1/1:4,3:7:19.86:252,20,0	0/0:16,0:13:23.01:0,23,323	0/0:15,0:8:0.03:0,0,118	0/0:25,0:25:60.08:0,60,1207	0/0:20,0:20:60.16:0,60,1294	1/1:18,0:18:47.26:469,47,0	0/0:10,0:9:23.97:0,24,295	0/0:22,0:22:66.10:0,66,1248	1/1:16,5:21:60.04:734,60,0	1/1:7,1:8:23.92:243,24,0	0/0:18,0:18:54.15:0,54,1209	0/0:18,0:18:53.17:0,53,1108	0/0:25,0:24:72.16:0,72,1476	1/1:14,3:17:47.54:404,48,0	1/1:14,7:21:63.07:827,63,0	0/1:20,2:22:15.39:418,0,15	1/1:17,3:20:26.97:440,27,0	0/1:10,0:8:0.66:1,0,268	0/0:21,0:21:57.07:0,57,951	0/0:15,0:15:21.28:0,21,815	0/0:18,0:18:51.08:0,51,1160	0/0:18,0:18:54.03:0,54,981	0/0:30,0:30:88.12:0,88,1845	0/1:24,0:24:32.04:76,0,32	0/1:19,1:20:99:253,0,183	0/0:25,0:25:72.14:0,72,1470	0/1:7,0:7:48.57:58,0,49
chr10	83924948	.	CAT	C	1251.10	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.172;DP=918;FS=7.401;HRun=0;HaplotypeScore=172.4785;InbreedingCoeff=0.9178;MQ=62.56;MQ0=6;MQRankSum=-10.656;QD=7.68;ReadPosRankSum=-0.020;VQSLOD=2.5249;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,5:26:5.79:37,6,0	0/0:0,5:5:5.21:0,5,22	0/0:49,1:32:50.84:0,51,1077	0/0:63,0:39:87.34:0,87,1326	0/0:26,0:26:75.21:0,75,1324	0/0:47,0:47:99:0,108,2127	1/1:20,11:30:16.06:221,16,0	0/0:48,0:46:99:0,129,1994	0/0:20,0:20:42.12:0,42,857	1/1:19,14:33:77.28:599,77,0	1/1:6,8:14:2.99:24,3,0	0/0:57,0:57:99:0,159,2521	0/0:37,0:37:99:0,111,1849	0/0:35,0:35:88.25:0,88,1713	1/1:8,5:13:11.30:76,11,0	1/1:8,8:16:18.47:160,18,0	1/1:19,2:21:27.07:182,27,0	1/1:5,4:9:18.75:146,19,0	0/0:25,0:24:57.14:0,57,967	0/0:30,0:30:76.96:0,77,1586	0/0:109,0:108:99:0,297,5496	0/0:39,0:39:99:0,114,1951	0/0:29,0:29:84.22:0,84,1528	0/0:50,0:49:99:0,126,2121	0/0:22,0:22:54.08:0,54,963	0/0:42,0:41:98.41:0,98,1803	0/0:15,0:15:45.06:0,45,724	0/0:6,0:5:15.05:0,15,289
chr10	83924956	.	C	CAG	2319	PASS	AB=0.917;AC=16;AF=0.286;AN=56;BaseQRankSum=12.702;DP=987;FS=18.990;HRun=0;HaplotypeScore=207.2598;InbreedingCoeff=0.8360;MQ=55.72;MQ0=11;MQRankSum=-9.497;QD=12.54;ReadPosRankSum=1.122;VQSLOD=1.7953;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,9:25:5.70:59,6,0	0/1:7,0:7:3.51:4,0,16	0/0:53,0:27:60.87:0,61,798	0/0:75,0:35:64.44:0,64,1029	0/0:26,0:26:72.21:0,72,1056	0/0:48,0:48:99:0,121,1707	1/1:27,6:32:8.54:250,9,0	0/0:53,0:50:99:0,133,1704	0/0:22,0:22:60.06:0,60,777	1/1:29,9:38:50.81:1086,51,0	0/1:12,3:15:0:0,0,1	0/0:57,0:57:99:0,153,2151	0/0:35,0:35:99:0,105,1493	0/0:39,0:39:99:0,114,1511	1/1:11,4:15:8.98:139,9,0	1/1:22,2:24:3.97:209,4,0	1/1:10,7:17:35.86:431,36,0	1/1:9,2:11:24.01:322,24,0	0/0:27,0:23:62.99:0,63,843	0/0:30,0:30:90.22:0,90,1322	0/0:122,0:121:99:0,325,4569	0/0:41,0:41:99:0,117,1696	0/0:30,0:30:81.26:0,81,1215	0/0:52,0:51:99:0,126,1780	0/0:27,0:26:60.16:0,60,842	0/0:45,0:44:92.42:0,92,1562	0/0:14,0:14:42.11:0,42,597	0/0:6,0:5:15.05:0,15,229
chr10	83924961	.	ACACT	A	1008.09	PASS	AB=0.784;AC=11;AF=0.196;AN=56;BaseQRankSum=11.181;DP=991;FS=3.794;HRun=0;HaplotypeScore=237.3762;InbreedingCoeff=0.1853;MQ=53.99;MQ0=20;MQRankSum=-9.718;QD=4.00;ReadPosRankSum=-0.804;VQSLOD=2.4989;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,5:23:3:25,3,0	0/0:5,4:9:14.72:0,15,94	0/0:57,0:22:19.77:0,20,635	0/1:81,0:32:30.83:31,0,712	0/0:23,0:23:69.21:0,69,1668	0/0:48,0:48:99:0,122,2619	0/1:20,11:30:30.15:134,0,30	0/0:54,0:51:89.50:0,89,2114	0/0:20,0:20:56.45:0,56,1194	0/1:23,14:37:47.12:601,0,47	0/1:7,8:15:0.04:0,0,0	0/0:56,0:56:99:0,132,3172	0/0:33,0:33:99:0,99,2434	0/0:38,0:38:99:0,105,2217	1/1:8,5:13:5.50:38,6,0	0/1:16,8:24:31.92:158,0,32	0/1:14,2:16:42.50:53,0,43	0/1:7,4:11:67.57:110,0,68	0/0:28,0:23:59.80:0,60,1069	0/0:32,0:32:96.03:0,96,2141	0/0:126,0:125:99:0,313,6864	0/0:43,0:43:99:0,120,2823	0/0:30,0:30:84.27:0,84,2168	0/0:50,0:49:99:0,126,2570	0/0:27,0:26:65.94:0,66,1221	0/0:45,0:43:72.40:0,72,2326	0/0:14,0:14:39.13:0,39,950	0/0:6,0:5:15.05:0,15,357
chr10	83924969	.	A	ATG	568.07	PASS	AB=0.957;AC=7;AF=0.125;AN=56;BaseQRankSum=9.473;DP=997;FS=2.076;HRun=0;HaplotypeScore=217.7884;InbreedingCoeff=0.1193;MQ=50.94;MQ0=22;MQRankSum=-8.446;QD=4.51;ReadPosRankSum=0.084;VQSLOD=2.4911;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:18:5.11:5,0,42	0/0:11,0:11:9.02:0,9,261	0/0:58,0:19:47.49:0,47,665	0/0:83,0:27:61.20:0,61,992	0/0:28,0:28:78.25:0,78,1226	0/0:44,0:44:99:0,112,1781	0/1:27,1:27:75.67:156,0,76	0/0:48,0:45:83.58:0,84,1752	0/0:23,0:23:60.16:0,60,942	0/1:35,1:36:99:307,0,442	0/0:20,0:20:0:0,0,1	0/0:52,0:52:99:0,144,2298	0/0:37,0:37:99:0,108,1726	0/0:37,0:37:99:0,105,1696	1/1:19,1:19:2.26:15,2,0	0/0:26,0:26:5.49:0,5,186	0/1:9,2:11:99:128,0,131	0/1:12,0:12:76.74:77,0,206	0/0:27,0:21:54.11:0,54,806	0/0:35,0:35:98.99:0,99,1595	0/0:124,0:122:99:0,319,5090	0/0:41,0:41:99:0,120,1943	0/0:34,0:34:90.29:0,90,1444	0/0:46,0:45:99:0,123,1957	0/0:26,0:25:60.20:0,60,967	0/0:44,0:41:99:0,120,1821	0/0:18,0:18:51.17:0,51,818	0/0:8,0:7:15.05:0,15,239
chr10	83924992	.	TACAC	T	1730.70	PASS	AB=0.808;AC=15;AF=0.268;AN=56;BaseQRankSum=13.540;DP=1056;FS=4.417;HRun=0;HaplotypeScore=266.0924;InbreedingCoeff=0.6926;MQ=47.74;MQ0=25;MQRankSum=-12.675;QD=8.24;ReadPosRankSum=0.484;VQSLOD=2.6666;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,5:19:6:77,6,0	0/1:11,2:13:19.70:201,0,20	0/0:45,0:13:30.03:0,30,529	0/0:63,0:10:24.01:0,24,425	0/0:29,0:28:75.24:0,75,1850	0/0:42,0:41:97.63:0,98,2211	1/1:20,7:26:4.27:139,4,0	0/0:67,0:56:99:0,135,2984	0/0:33,0:33:81.27:0,81,2030	1/1:37,12:48:41.33:807,41,0	0/1:18,5:23:0.05:0,0,0	0/0:59,0:57:99:0,123,3035	0/0:39,0:39:93.17:0,93,2244	0/0:37,0:37:99:0,105,2529	0/1:16,9:24:35.01:43,0,35	1/1:22,10:32:23.58:255,24,0	1/1:5,5:10:10.59:159,11,0	1/1:5,6:11:5.23:222,5,0	0/0:25,0:21:54.02:0,54,1206	0/0:40,0:40:99:0,111,2602	0/0:132,0:127:99:0,313,7398	0/0:46,0:46:99:0,126,2879	0/0:37,0:37:93.29:0,93,2248	0/0:49,0:49:99:0,117,2801	0/0:24,0:24:63.22:0,63,1585	0/0:23,1:41:8.22:0,8,456	0/0:19,0:19:57.18:0,57,1379	0/0:2,0:7:14.17:0,14,74
chr10	83925010	.	TAC	T	142.41	PASS	AB=0.953;AC=9;AF=0.161;AN=56;BaseQRankSum=9.349;DP=1049;FS=1.567;HRun=0;HaplotypeScore=247.7886;InbreedingCoeff=0.1612;MQ=48.21;MQ0=20;MQRankSum=-8.847;QD=0.73;ReadPosRankSum=1.894;VQSLOD=2.0454;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,6:18:1.33:37,1,0	0/1:18,0:18:33.20:37,0,33	0/0:25,0:13:19.31:0,19,270	0/0:51,0:11:23.40:0,23,321	0/0:28,0:27:69.22:0,69,1129	0/0:41,0:40:98.19:0,98,1672	0/1:20,4:26:1.28:40,0,1	0/0:78,0:58:99:0,154,2518	0/0:37,0:37:99:0,99,1612	0/1:45,1:43:93.37:93,0,203	0/1:26,0:26:0.06:0,0,0	0/0:56,0:54:99:0,132,2300	0/0:37,0:36:85.52:0,86,1400	0/0:40,0:40:99:0,111,1842	0/0:31,1:31:13.26:0,13,103	0/1:39,0:39:31.84:32,0,66	0/1:8,1:9:17.70:18,0,31	0/1:11,0:11:14.94:15,0,39	0/0:27,0:21:42.07:0,42,638	0/0:40,0:40:99:0,105,1738	0/0:131,0:125:99:0,308,5071	0/0:45,0:45:99:0,116,1775	0/0:31,0:31:75.20:0,75,1164	0/0:45,0:45:99:0,102,1721	0/0:25,0:25:57.18:0,57,940	0/0:54,0:47:99:0,105,1648	0/0:20,0:20:57.18:0,57,943	0/0:9,0:9:21.07:0,21,344
chr10	83925013	.	A	ACT	261.46	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=8.248;DP=1057;FS=5.796;HRun=0;HaplotypeScore=253.3252;InbreedingCoeff=0.2022;MQ=48.70;MQ0=22;MQRankSum=-7.123;QD=1.13;ReadPosRankSum=-5.334;VQSLOD=1.1311;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:19:4.18:31,0,4	0/1:18,0:18:1.37:1,0,96	0/0:27,0:13:32.99:0,33,377	0/0:47,0:11:15.56:0,16,315	0/0:28,0:27:69.22:0,69,1028	0/0:41,0:40:99:0,109,1584	1/1:26,6:31:7.05:143,7,0	0/0:76,0:56:99:0,159,2343	0/0:37,0:37:99:0,102,1485	0/1:46,0:43:69.60:70,0,379	0/1:25,0:25:0.01:0,0,0	0/0:57,0:55:99:0,147,2160	0/0:38,0:37:93.24:0,93,1336	0/0:40,0:40:99:0,117,1716	0/1:39,0:38:15.95:49,0,16	0/1:39,0:39:52.80:63,0,53	0/0:9,0:9:7.43:0,7,64	0/1:11,0:11:33.19:33,0,45	0/0:29,0:22:53.61:0,54,664	0/0:38,0:38:99:0,114,1658	0/0:130,0:124:99:0,329,4754	0/0:42,0:42:99:0,117,1631	0/0:33,0:33:87.19:0,87,1180	0/0:46,0:46:99:0,108,1607	0/0:27,0:27:66.17:0,66,930	0/0:51,0:44:99:0,123,1675	0/0:20,0:20:60.18:0,60,875	0/0:9,0:9:21.07:0,21,321
chr10	83925021	.	TCA	T	1573.79	PASS	AB=0.694;AC=11;AF=0.196;AN=56;BaseQRankSum=11.869;DP=1064;FS=2.937;HRun=0;HaplotypeScore=250.0524;InbreedingCoeff=0.2663;MQ=48.63;MQ0=24;MQRankSum=-8.483;QD=6.30;ReadPosRankSum=-1.219;VQSLOD=2.5163;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,6:18:3.75:38,4,0	0/1:7,11:18:48.42:160,0,48	0/0:28,1:13:25.25:0,25,356	0/0:52,0:12:23.80:0,24,325	0/0:30,0:29:75.22:0,75,1201	0/0:41,0:39:94.54:0,95,1589	0/1:17,20:36:5.89:55,0,6	0/0:79,0:59:99:0,148,2300	0/0:39,0:39:93.32:0,93,1560	0/1:25,26:49:99:910,0,100	0/1:12,12:24:0.06:0,0,0	0/0:59,0:57:99:0,138,2312	0/0:34,0:33:82.52:0,83,1364	0/0:41,0:41:99:0,117,1894	1/1:32,10:41:19.48:209,19,0	0/1:20,19:39:24.56:263,0,25	0/1:7,2:9:61.28:61,0,62	0/1:7,2:10:26.12:26,0,38	0/0:25,0:19:40.84:0,41,570	0/0:39,0:39:99:0,105,1723	0/0:125,0:120:99:0,295,4858	0/0:38,0:38:99:0,105,1689	0/0:27,0:27:75.25:0,75,1244	0/0:49,0:49:99:0,108,1837	0/0:26,0:26:63.18:0,63,1023	0/0:51,1:46:95.68:0,96,1821	0/0:20,0:20:60.20:0,60,1000	0/0:9,0:9:21.02:0,21,298
chr10	83925051	.	T	TCA	1555.32	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.398;DP=1066;FS=10.337;HRun=0;HaplotypeScore=264.9598;InbreedingCoeff=0.8581;MQ=60.39;MQ0=14;MQRankSum=-1.237;QD=25.09;ReadPosRankSum=0.349;VQSLOD=2.8244;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,8:17:8.26:111,8,0	0/0:19,0:19:18.06:0,18,227	0/0:58,0:24:15.12:0,15,347	0/0:77,0:34:14.28:0,14,407	0/0:25,0:25:69.22:0,69,878	0/0:42,0:40:93.21:0,93,1161	0/0:42,0:42:12.02:0,12,150	0/0:52,0:43:89.03:0,89,1158	0/0:36,0:36:84.20:0,84,1035	0/0:60,0:58:92.08:0,92,1423	0/0:23,0:23:10.71:0,11,151	0/0:53,0:53:99:0,132,1627	0/0:31,0:31:81.25:0,81,1017	0/0:38,0:38:85.95:0,86,1209	0/0:44,0:45:36.67:0,37,454	0/0:45,0:45:34.17:0,34,518	0/0:13,0:13:3.71:0,4,175	0/0:8,0:8:11.73:0,12,107	0/0:19,0:17:42.13:0,42,534	0/0:35,0:36:96.14:0,96,1197	0/0:126,0:125:99:0,268,3364	0/0:39,0:39:90.27:0,90,1124	0/0:26,0:25:61.73:0,62,753	0/0:48,0:48:99:0,105,1312	0/0:19,0:20:42.14:0,42,539	1/1:12,27:38:10.95:1276,11,0	0/0:21,0:21:57.18:0,57,724	1/1:1,5:6:18.06:298,18,0
chr10	83925062	.	C	CAT	742.15	PASS	AB=0.885;AC=5;AF=0.089;AN=56;BaseQRankSum=7.364;DP=1009;FS=10.497;HRun=0;HaplotypeScore=246.5954;InbreedingCoeff=0.3432;MQ=62.60;MQ0=7;MQRankSum=-3.117;QD=10.31;ReadPosRankSum=1.093;VQSLOD=1.9763;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,3:16:11.78:51,0,12	0/0:17,0:17:20.99:0,21,283	0/0:71,0:28:60.17:0,60,647	0/0:81,0:39:28.56:0,29,598	0/0:26,0:26:72.23:0,72,1144	0/0:38,0:37:99:0,108,1613	0/0:42,0:42:32.66:0,33,332	0/0:38,0:38:99:0,111,1634	0/0:35,0:35:99:0,99,1448	0/0:47,0:47:82.64:0,83,1811	0/0:21,0:21:16.65:0,17,233	0/0:51,0:51:99:0,144,2166	0/0:30,0:30:87.27:0,87,1364	0/0:38,0:39:99:0,102,1649	0/0:46,0:46:51.33:0,51,675	0/0:36,0:36:46.05:0,46,741	0/1:10,3:13:21.05:21,0,267	0/0:8,0:8:9.01:0,9,109	0/0:23,0:22:63.50:0,64,851	0/0:33,0:33:99:0,99,1556	0/0:110,0:110:99:0,289,4451	0/0:35,0:35:96.25:0,96,1416	0/0:24,0:24:69.18:0,69,1022	0/0:51,0:51:99:0,135,1875	0/0:16,0:16:48.08:0,48,727	0/1:37,0:37:99:625,0,163	0/0:19,0:19:57.18:0,57,890	1/1:6,0:6:18.01:167,18,0
chr10	83925084	.	TAC	T	292.49	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.635;DP=965;FS=0.000;HRun=0;HaplotypeScore=247.1610;InbreedingCoeff=0.7541;MQ=55.62;MQ0=13;MQRankSum=-1.091;QD=15.39;ReadPosRankSum=-0.715;VQSLOD=3.2199;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:0.89:0,1,2	0/0:15,0:15:19.71:0,20,103	0/0:53,0:18:23.16:0,23,256	0/0:57,0:30:43.99:0,44,722	0/0:19,0:19:47.54:0,48,803	0/0:38,0:38:81.23:0,81,1267	0/0:43,0:43:11.31:0,11,148	0/0:43,0:37:63.43:0,63,1061	0/0:36,0:36:84:0,84,1337	0/0:51,0:51:74.22:0,74,417	0/0:22,0:22:9.41:0,9,44	0/0:52,0:52:99:0,135,2095	0/0:31,0:31:75.71:0,76,1219	0/0:36,0:36:87.04:0,87,1449	0/0:40,0:40:35.60:0,36,463	0/0:33,0:33:44.75:0,45,300	0/0:15,0:15:25.87:0,26,143	0/0:8,0:8:7.45:0,7,99	0/0:30,0:28:66.08:0,66,978	0/0:32,0:32:69.20:0,69,1129	0/0:102,0:99:99:0,198,3213	0/0:33,0:33:78.12:0,78,1162	0/0:26,0:26:69.15:0,69,1076	0/0:47,0:47:99:0,111,1839	1/1:7,11:19:29.50:386,30,0	0/0:39,0:39:80.62:0,81,1118	0/0:22,0:22:56.90:0,57,880	0/0:8,0:8:11.07:0,11,151
chr10	83925105	.	TCA	T	2052.40	PASS	AB=0.845;AC=14;AF=0.250;AN=56;BaseQRankSum=11.858;DP=903;FS=14.259;HRun=0;HaplotypeScore=218.0867;InbreedingCoeff=0.7725;MQ=54.44;MQ0=20;MQRankSum=-7.879;QD=12.14;ReadPosRankSum=0.042;VQSLOD=1.6826;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:1,12:13:0.47:0,0,1	1/1:0,9:9:17.96:162,18,0	0/0:41,0:8:18.06:0,18,304	0/0:70,1:32:38.56:0,39,699	0/0:25,0:25:63.20:0,63,1035	0/0:33,0:33:75.25:0,75,1242	1/1:12,16:28:10.83:103,11,0	0/0:44,0:37:68.23:0,68,1188	0/0:34,0:34:87.28:0,87,1434	1/1:11,33:44:86.14:1186,86,0	1/1:3,13:16:11.72:144,12,0	0/0:48,0:48:99:0,117,1880	0/0:29,0:29:75.20:0,75,1236	0/0:40,0:40:99:0,100,1614	0/1:24,6:30:10.05:10,0,34	1/1:6,20:26:13.14:378,13,0	1/1:2,8:10:5.79:217,6,0	0/1:5,1:6:4.54:31,0,5	0/0:26,0:22:47.29:0,47,744	0/0:25,0:24:45.15:0,45,763	0/0:95,0:92:99:0,174,2849	0/0:32,0:32:81.28:0,81,1377	0/0:28,0:28:57.17:0,57,975	0/0:51,0:51:99:0,123,2046	0/0:24,0:24:35.83:0,36,498	0/0:39,1:38:64.73:0,65,1548	0/0:29,0:29:59.45:0,59,930	0/0:4,0:4:12.04:0,12,207
chr10	83925107	.	A	ACACACT	1067.54	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=8.502;DP=908;FS=8.000;HRun=0;HaplotypeScore=279.5860;InbreedingCoeff=0.4090;MQ=54.14;MQ0=21;MQRankSum=-5.450;QD=5.83;ReadPosRankSum=-3.629;VQSLOD=0.7371;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:0.15:0,0,1	0/1:10,0:10:20.85:21,0,102	0/0:51,0:11:21.07:0,21,370	0/0:71,0:30:36.55:0,37,816	0/0:24,0:24:63.20:0,63,1291	0/0:32,0:32:75.25:0,75,1568	1/1:25,2:27:14.44:198,14,0	0/0:43,0:36:38.10:0,38,1288	0/0:33,0:33:87.27:0,87,1830	0/1:44,0:45:99:337,0,330	0/1:15,0:15:7.55:20,0,8	0/0:49,0:49:99:0,117,2362	0/0:31,0:31:78.71:0,79,1594	0/0:40,0:40:99:0,100,1991	1/1:15,17:32:12.47:440,12,0	0/1:25,0:25:13.85:14,0,269	0/1:11,0:11:53.18:53,0,95	1/1:4,1:5:6.02:142,6,0	0/0:25,0:21:50.84:0,51,934	0/0:25,0:24:44.84:0,45,956	0/0:96,0:93:99:0,175,3610	0/0:29,0:29:81.28:0,81,1722	0/0:26,0:26:57.03:0,57,1249	0/0:53,0:53:99:0,126,2631	0/0:25,0:25:35.56:0,36,639	0/0:39,0:37:65.21:0,65,1850	0/0:28,0:28:66.10:0,66,1238	0/0:4,0:4:12.04:0,12,265
chr10	83925125	.	T	TCA	4636.06	PASS	AB=0.643;AC=22;AF=0.393;AN=56;BaseQRankSum=13.135;DP=952;FS=6.216;HRun=0;HaplotypeScore=219.7799;InbreedingCoeff=0.8812;MQ=53.61;MQ0=30;MQRankSum=-11.897;QD=19.24;ReadPosRankSum=0.310;VQSLOD=4.3524;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,6:14:0.07:0,0,1	1/1:2,7:10:24.07:292,24,0	0/0:86,0:19:32.90:0,33,388	0/0:94,0:22:36:0,36,416	0/0:21,0:21:51.16:0,51,645	0/0:31,0:31:69.22:0,69,886	1/1:10,17:27:10.30:144,10,0	0/0:41,0:32:33.13:0,33,669	0/0:35,0:35:88.42:0,88,1156	1/1:10,26:37:84.22:1170,84,0	0/1:5,12:17:0.49:0,0,1	0/0:58,0:58:99:0,120,1445	0/0:33,0:33:77.23:0,77,984	0/0:38,0:38:86.77:0,87,1084	1/1:6,22:28:11.66:201,12,0	1/1:5,16:21:33.10:409,33,0	1/1:6,8:14:3.31:243,3,0	1/1:0,1:1:3.01:51,3,0	0/0:20,0:18:44.87:0,45,533	0/0:20,0:19:34.60:0,35,459	0/0:105,0:102:99:0,162,1951	0/0:27,0:27:63.93:0,64,772	0/0:24,0:24:50.36:0,50,621	0/0:52,0:52:99:0,114,1446	1/1:3,18:21:17.62:303,18,0	1/1:16,28:42:96.26:1541,96,0	0/0:26,0:26:24.21:0,24,570	1/1:0,7:7:18.06:280,18,0
chr10	83925141	.	C	CCA	2523.50	PASS	AB=0.881;AC=12;AF=0.214;AN=56;BaseQRankSum=-7.930;DP=936;FS=2.911;HRun=0;HaplotypeScore=218.3240;InbreedingCoeff=0.2081;MQ=51.98;MQ0=27;MQRankSum=1.518;QD=7.56;ReadPosRankSum=-2.553;VQSLOD=2.5698;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:12:5.09:0,5,28	0/0:4,0:9:11.36:0,11,56	0/0:86,0:22:6.01:0,6,65	0/0:95,0:21:5.81:0,6,52	0/1:16,1:19:7.31:7,0,310	0/0:28,1:31:12.96:0,13,516	0/0:16,0:25:2.04:0,2,13	1/1:36,3:34:39.07:502,39,0	0/1:36,1:38:23.56:24,0,527	0/0:22,0:33:33.53:0,34,163	0/1:7,0:16:0.14:1,0,0	0/0:45,1:50:52.53:0,53,966	0/0:23,0:26:62.54:0,63,617	0/0:35,0:39:83.34:0,83,859	0/1:13,0:29:0.14:1,0,0	0/1:10,0:18:0.89:1,0,19	0/0:10,0:17:2.65:0,3,14	0/0:4,0:4:2.84:0,3,14	0/1:20,4:24:47.55:153,0,48	1/1:9,9:20:14.57:229,15,0	0/1:42,57:103:81.50:1409,0,81	0/0:25,0:27:40.49:0,40,471	0/0:29,0:30:32.99:0,33,410	0/0:44,0:44:66.03:0,66,723	0/0:25,0:25:17.53:0,18,120	0/0:17,0:39:26.95:0,27,217	0/1:11,14:25:26.70:339,0,27	0/0:6,0:7:5.37:0,5,27
chr10	83925364	.	TC	T	6915.76	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=19.059;DP=761;FS=3.539;HRun=3;HaplotypeScore=113.2023;InbreedingCoeff=1.0000;MQ=85.71;MQ0=0;MQRankSum=-4.830;QD=32.62;ReadPosRankSum=1.914;VQSLOD=4.4937;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1704	1/1:1,20:21:57.09:671,57,0	0/0:26,0:26:75.22:0,75,1013	0/0:31,0:31:78.07:0,78,1090	0/0:24,0:24:72.24:0,72,1032	0/0:30,0:30:90.30:0,90,1296	1/1:1,25:26:66.21:818,66,0	0/0:22,0:22:57.18:0,57,805	0/0:30,0:30:90.29:0,90,1278	1/1:1,28:29:78.21:949,78,0	1/1:1,23:24:57.11:686,57,0	0/0:30,0:30:90.29:0,90,1278	0/0:21,0:21:63.20:0,63,888	0/0:31,0:31:87.29:0,87,1253	1/1:1,31:32:90.28:1115,90,0	1/1:4,29:33:81.25:1004,81,0	1/1:1,27:28:81.25:1004,81,0	1/1:0,19:19:54.17:669,54,0	0/0:24,0:24:66.22:0,66,949	0/0:33,0:33:96.30:0,96,1346	0/0:25,0:25:72.21:0,72,999	0/0:28,0:28:84.28:0,84,1207	0/0:29,0:29:84.26:0,84,1176	0/0:35,0:35:99:0,102,1468	0/0:21,0:21:63.21:0,63,906	0/0:24,0:24:69.21:0,69,974	0/0:28,0:27:84.28:0,84,1205	0/0:16,0:16:48.13:0,48,652
chr10	83925572	.	CCCACACCA	C	2182.15	PASS	AB=0.511;AC=3;AF=0.054;AN=56;BaseQRankSum=7.389;DP=667;FS=0.709;HRun=0;HaplotypeScore=192.7288;InbreedingCoeff=0.6402;MQ=86.91;MQ0=0;MQRankSum=-7.848;QD=72.74;ReadPosRankSum=2.046;VQSLOD=3.5324;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,4750	0/0:11,0:11:33.11:0,33,1416	0/0:22,0:22:66.23:0,66,2704	0/0:27,0:27:81.25:0,81,2746	0/0:16,0:16:45.15:0,45,1837	0/0:15,0:15:45.15:0,45,2059	0/0:34,0:34:99:0,102,4614	0/0:30,0:30:90.30:0,90,3525	0/0:26,0:26:78.27:0,78,3408	0/0:23,0:23:69.24:0,69,3084	0/0:11,0:11:30.10:0,30,1305	0/0:27,0:27:81.27:0,81,3531	0/0:19,0:19:57.20:0,57,2595	0/0:19,0:19:57.20:0,57,2626	0/0:27,0:27:81.27:0,81,3638	0/0:30,0:30:90.31:0,90,4008	0/0:35,0:35:99:0,105,4688	0/0:25,0:25:72.19:0,72,3028	0/0:13,0:13:39.12:0,39,1590	0/0:16,0:16:45.14:0,45,1879	0/0:61,0:61:99:0,181,7621	0/0:22,0:22:63.21:0,63,2457	0/0:20,0:20:57.20:0,57,2411	0/0:33,0:33:99:0,99,4195	0/0:21,0:21:60.21:0,60,2684	0/1:1,23:24:53.02:1770,0,53	0/0:16,0:16:48.16:0,48,2206	1/1:0,6:6:18.06:516,18,0
chr10	83926292	.	C	CAG	764.49	PASS	AB=0.877;AC=7;AF=0.135;AN=52;BaseQRankSum=5.100;DP=1105;FS=12.111;HRun=0;HaplotypeScore=166.3464;InbreedingCoeff=-0.1507;MQ=41.70;MQ0=205;MQRankSum=-3.856;QD=1.99;ReadPosRankSum=2.175;VQSLOD=2.1178;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:25:42.14:0,42,587	0/1:14,4:9:38.86:39,0,152	./.	./.	0/0:10,0:7:8.97:0,9,87	0/0:12,0:12:24.08:0,24,336	0/1:108,17:95:99:589,0,1080	0/0:31,0:6:18.06:0,18,252	0/0:40,0:38:99:0,111,1543	0/1:66,3:41:20.84:21,0,1008	0/1:15,8:14:68.86:144,0,69	0/0:45,0:44:99:0,105,1448	0/0:23,0:23:64.46:0,64,885	0/0:38,0:37:85.48:0,85,1140	0/0:77,12:66:75.05:0,75,1478	0/1:49,9:43:63.19:63,0,976	0/0:51,7:47:36.85:0,37,1134	0/1:68,10:65:29.96:30,0,1562	0/0:24,0:9:18.05:0,18,236	0/0:12,0:8:12:0,12,146	0/0:71,0:58:99:0,144,2010	0/0:17,0:12:15.01:0,15,188	0/0:14,0:7:14.97:0,15,166	0/0:30,0:30:84.24:0,84,1153	0/0:47,0:26:47.92:0,48,646	0/0:56,0:29:64.46:0,64,882	0/0:24,0:23:57.19:0,57,791	0/1:13,0:10:0.92:1,0,231
chr10	83929630	.	CT	C	3144.16	PASS	AB=0.909;AC=17;AF=0.304;AN=56;BaseQRankSum=10.397;DP=589;FS=8.764;HRun=10;HaplotypeScore=74.0676;InbreedingCoeff=0.9022;MQ=81.20;MQ0=1;MQRankSum=-1.068;QD=17.28;ReadPosRankSum=0.956;VQSLOD=3.9831;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:77.06:0,77,487	1/1:1,5:7:17.03:136,17,0	0/0:23,0:23:28.03:0,28,360	0/0:22,1:17:21.58:0,22,168	0/0:28,0:28:69.10:0,69,747	0/0:22,2:24:34.11:0,34,604	1/1:2,22:24:56.99:495,57,0	0/0:36,1:37:64.07:0,64,906	0/0:22,1:23:43.17:0,43,695	1/1:3,18:21:53.99:469,54,0	1/1:3,21:24:59.95:514,60,0	0/0:12,0:12:33.09:0,33,365	0/0:11,0:11:24.06:0,24,266	0/0:20,0:20:31.24:0,31,541	1/1:3,21:25:50.01:423,50,0	1/1:2,13:15:35.98:313,36,0	1/1:0,37:37:92.98:807,93,0	1/1:1,8:9:20.99:182,21,0	0/0:24,1:25:31.05:0,31,552	0/0:17,0:19:50.89:0,51,529	0/0:18,0:18:45.12:0,45,498	0/0:16,0:16:39.09:0,39,423	0/0:18,0:18:41.22:0,41,463	0/1:18,2:20:13.01:13,0,326	0/0:25,0:25:66.11:0,66,705	0/0:13,1:14:7.03:0,7,306	0/0:24,1:25:43.13:0,43,704	0/0:11,0:11:30.08:0,30,332
chr10	83931059	.	CA	C	965.39	PASS	AB=0.611;AC=3;AF=0.054;AN=56;BaseQRankSum=2.412;DP=1004;FS=0.635;HRun=2;HaplotypeScore=172.5711;InbreedingCoeff=0.6730;MQ=54.47;MQ0=23;MQRankSum=1.026;QD=21.94;ReadPosRankSum=0.194;VQSLOD=3.2777;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:45:86.48:0,86,762	0/0:9,0:9:17.89:0,18,160	0/0:48,0:13:30.09:0,30,380	0/0:60,0:25:56.99:0,57,713	0/0:29,0:29:74.09:0,74,1033	0/0:25,0:25:70.29:0,70,906	0/0:43,0:42:99:0,111,1043	0/0:38,0:37:99:0,104,1296	0/0:38,0:38:99:0,112,1496	0/0:37,0:36:92.29:0,92,917	0/0:22,0:21:51.04:0,51,365	0/0:33,0:33:97.51:0,98,1265	0/0:34,0:34:92.89:0,93,1381	0/0:36,0:36:99:0,102,1398	0/0:35,0:34:77.65:0,78,676	0/0:51,0:49:95.75:0,96,970	0/0:28,0:27:35.63:0,36,301	0/0:18,0:18:27.58:0,28,392	0/0:20,0:19:40.11:0,40,474	0/0:27,1:27:73.23:0,73,942	0/0:83,0:82:99:0,229,3073	0/0:33,0:33:89.69:0,90,1190	0/0:23,0:23:61.26:0,61,766	0/0:80,0:80:99:0,226,3043	0/0:28,0:27:29.80:0,30,285	1/1:8,25:27:39.27:878,39,0	0/0:34,0:34:96.41:0,96,1308	0/1:4,7:9:11.47:193,0,11
chr10	83931060	.	AAC	A	1092.54	PASS	AB=0.961;AC=18;AF=0.321;AN=56;BaseQRankSum=8.938;DP=1012;FS=4.814;HRun=0;HaplotypeScore=184.0208;InbreedingCoeff=0.0101;MQ=54.29;MQ0=24;MQRankSum=1.330;QD=2.48;ReadPosRankSum=-1.152;VQSLOD=2.4752;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:47,0:45:65.52:326,66,0	0/1:9,0:9:8.20:8,0,38	0/0:49,0:13:6:0,6,80	0/0:60,0:24:21.52:0,22,251	0/1:29,1:30:0.48:0,0,908	0/1:22,3:25:19.96:20,0,583	0/1:40,0:39:21.99:59,0,22	0/1:40,0:38:6.96:7,0,717	0/0:36,2:38:13.19:0,13,1094	0/1:37,0:36:87:87,0,124	1/1:22,0:21:8.52:181,9,0	0/0:33,0:33:60.20:0,60,870	0/0:34,0:34:52.20:0,52,1301	0/0:36,0:36:81.27:0,81,1205	0/1:35,0:34:11.56:17,0,12	0/0:51,0:49:21.09:0,21,289	0/0:29,0:28:1.59:0,2,45	0/1:19,0:19:15.65:66,0,16	0/1:21,2:22:31.53:32,0,345	0/1:25,2:26:31.84:32,0,688	0/0:77,5:81:49.86:0,50,2135	0/0:30,3:33:5.87:0,6,895	0/1:23,2:25:22.96:23,0,543	0/0:79,2:81:74.29:0,74,2408	1/1:9,19:27:35.11:382,35,0	0/0:32,0:28:58.35:0,58,237	0/1:30,4:34:19.37:19,0,1097	0/0:10,0:9:16.02:0,16,104
chr10	83931062	.	C	CAACAACA	12883.55	PASS	AB=0.593;AC=15;AF=0.268;AN=56;BaseQRankSum=5.194;DP=1044;FS=3.000;HRun=0;HaplotypeScore=239.3561;InbreedingCoeff=0.8850;MQ=54.10;MQ0=25;MQRankSum=-11.376;QD=49.36;ReadPosRankSum=-3.331;VQSLOD=4.0761;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:4.58:0,5,767	1/1:2,8:13:23.06:625,23,0	0/0:49,0:12:24.08:0,24,545	0/0:59,0:21:50.66:0,51,995	0/0:30,0:31:81.54:0,82,1782	0/0:26,0:26:68.26:0,68,1463	1/1:22,0:40:99:2301,112,0	0/0:39,0:39:38.32:0,38,1836	0/0:38,0:38:99:0,108,2472	1/1:7,24:42:95.30:2340,95,0	1/1:1,15:23:49.36:956,49,0	0/0:34,0:34:84.93:0,85,1797	0/0:34,0:34:99:0,102,2383	0/0:37,0:37:99:0,99,2266	1/1:15,0:34:76.65:1989,77,0	1/1:6,38:52:29.51:3015,30,0	0/1:10,17:31:37.15:727,0,37	1/1:10,0:19:25.38:930,25,0	0/0:25,0:24:28.03:0,28,896	0/0:25,0:25:75.18:0,75,1569	0/0:85,0:83:99:0,219,4746	0/0:33,0:33:61.51:0,62,1997	0/0:26,0:26:66.21:0,66,1195	0/0:79,0:82:99:0,187,4880	0/0:28,0:27:44.21:0,44,759	0/0:35,0:29:77.33:0,77,1079	0/0:34,0:34:99:0,99,2278	0/0:11,0:9:24.05:0,24,468
chr10	83931063	.	ACACAC	A	2564.27	PASS	AB=0.900;AC=9;AF=0.161;AN=56;BaseQRankSum=9.821;DP=1023;FS=4.316;HRun=0;HaplotypeScore=230.8067;InbreedingCoeff=0.0777;MQ=53.32;MQ0=26;MQRankSum=-8.862;QD=9.29;ReadPosRankSum=-3.162;VQSLOD=2.2146;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,46:47:72.20:1624,72,0	0/0:12,0:13:26.29:0,26,417	0/0:49,0:11:26.76:0,27,402	0/0:58,0:20:56.38:0,56,1028	0/0:32,0:32:90.31:0,90,2541	0/0:26,0:26:75.25:0,75,1870	0/1:32,0:37:99:481,0,137	0/0:42,0:40:99:0,120,2811	0/0:38,0:38:99:0,111,3092	0/1:35,0:35:23.08:23,0,1218	0/1:22,0:21:10.17:10,0,488	0/0:36,0:36:98.46:0,98,2516	0/0:34,0:34:99:0,102,3057	0/0:37,0:37:99:0,108,3083	0/1:20,0:34:99:286,0,123	0/1:46,0:47:22.46:22,0,1424	0/1:25,0:26:94.91:95,0,450	0/1:18,0:21:99:169,0,174	0/0:25,0:24:72.19:0,72,1496	0/0:26,0:25:75.25:0,75,1971	0/0:81,0:80:99:0,217,5810	0/0:33,0:33:92.81:0,93,2502	0/0:26,0:26:69.22:0,69,1741	0/0:81,0:81:99:0,222,6271	0/0:26,0:27:49.93:0,50,580	0/0:32,1:28:83.74:0,84,2011	0/0:36,0:36:99:0,102,2941	0/0:11,0:9:24.08:0,24,615
chr10	83931065	.	AC	A	1326.21	PASS	AB=0.961;AC=8;AF=0.143;AN=56;BaseQRankSum=14.654;DP=1029;FS=4.333;HRun=1;HaplotypeScore=177.4530;InbreedingCoeff=0.7113;MQ=53.16;MQ0=27;MQRankSum=-10.490;QD=7.71;ReadPosRankSum=-1.552;VQSLOD=0.3047;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:49,0:47:51.06:161,51,0	0/0:13,0:13:25.43:0,25,245	0/0:49,0:11:26.35:0,26,328	0/0:57,0:19:56.45:0,56,713	0/0:33,0:33:87.08:0,87,1292	0/0:26,0:26:71.72:0,72,1032	1/1:33,5:38:99:594,100,0	0/0:45,0:43:99:0,126,1708	0/0:39,0:39:99:0,111,1628	0/0:35,1:35:26.84:0,27,649	0/0:19,2:21:18.20:0,18,224	0/0:36,0:36:99:0,99,1422	0/0:33,0:33:97.57:0,98,1504	0/0:38,0:38:99:0,111,1650	1/1:34,1:34:70.60:420,71,0	0/0:47,2:47:39.39:0,39,773	0/1:27,1:27:32.43:32,0,308	0/1:21,1:22:14.40:274,0,14	0/0:25,0:23:65.99:0,66,895	0/0:26,0:25:71.57:0,72,1021	0/0:82,0:80:99:0,211,3070	0/0:34,0:34:93.21:0,93,1350	0/0:25,0:25:62.67:0,63,892	0/0:80,0:80:99:0,214,3234	0/0:28,0:27:26.43:0,26,170	0/0:34,0:28:61.72:0,62,1043	0/0:35,0:35:97.05:0,97,1446	0/0:11,0:9:24.08:0,24,354
chr10	83931066	.	C	CAACA	3909.20	PASS	AB=0.964;AC=10;AF=0.179;AN=56;BaseQRankSum=15.553;DP=1040;FS=0.703;HRun=0;HaplotypeScore=225.1583;InbreedingCoeff=0.2693;MQ=53.15;MQ0=27;MQRankSum=-14.608;QD=15.64;ReadPosRankSum=-0.465;VQSLOD=3.2389;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:67.43:0,67,582	0/1:13,0:13:28.74:29,0,107	0/0:49,0:12:23.80:0,24,384	0/0:57,0:19:52.86:0,53,846	0/0:33,0:33:90.31:0,90,1706	0/0:26,0:26:75.24:0,75,1359	1/1:28,10:40:99:1553,112,0	0/0:44,0:42:99:0,120,2119	0/0:40,0:40:99:0,114,2078	0/1:36,0:35:99:130,0,515	0/1:24,0:23:81.90:82,0,300	0/0:34,0:34:96.28:0,96,1766	0/0:35,0:35:99:0,99,1938	0/0:38,0:38:99:0,108,2021	1/1:20,12:35:76.26:1197,76,0	0/1:49,0:47:99:228,0,178	0/1:30,0:29:99:118,0,312	0/1:16,6:22:31.39:573,0,31	0/0:24,0:22:66.21:0,66,1158	0/0:26,0:25:72.24:0,72,1336	0/0:85,0:83:99:0,213,3932	0/0:35,0:35:95.40:0,95,1783	0/0:25,0:25:66.20:0,66,1161	0/0:80,0:80:99:0,219,4162	0/0:28,0:27:45.14:0,45,595	0/0:34,0:28:81.28:0,81,1251	0/0:35,0:35:99:0,102,1898	0/0:11,0:9:24.06:0,24,439
chr10	83931200	.	CAT	C	15348.87	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=18.037;DP=1059;FS=5.954;HRun=0;HaplotypeScore=146.4728;InbreedingCoeff=1.0000;MQ=58.17;MQ0=7;MQRankSum=1.269;QD=37.71;ReadPosRankSum=1.973;VQSLOD=6.3658;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,21:32:87.19:1193,87,0	1/1:3,14:17:48.15:711,48,0	0/0:44,0:27:77.92:0,78,1276	0/0:46,0:37:99:0,102,1588	0/0:23,0:23:66.18:0,66,1203	0/0:25,0:25:60.04:0,60,1219	1/1:0,36:35:90.30:1366,90,0	0/0:48,0:46:99:0,129,2228	0/0:52,0:52:99:0,147,2696	1/1:10,28:35:99:1391,100,0	1/1:1,21:22:54.10:825,54,0	0/0:37,0:37:99:0,103,1734	0/0:39,0:39:99:0,117,2200	0/0:40,0:40:99:0,111,1928	1/1:0,52:51:99:1812,120,0	1/1:1,40:40:99:1509,99,0	1/1:13,31:40:99:1640,120,0	1/1:3,39:42:99:1622,108,0	0/0:20,0:20:60.11:0,60,992	0/0:23,0:23:69.18:0,69,1229	0/0:93,0:93:99:0,259,4713	0/0:34,0:34:99:0,99,1689	0/0:35,0:35:99:0,105,1870	0/0:53,0:53:99:0,154,2767	1/1:2,19:21:60.20:914,60,0	1/1:3,42:44:99:1722,120,0	0/0:40,0:39:99:0,120,2186	1/1:0,17:17:42.14:642,42,0
chr10	83931247	.	TCACACACATACA	T	1387.97	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.824;DP=1042;FS=0.880;HRun=0;HaplotypeScore=371.1113;InbreedingCoeff=0.9859;MQ=57.62;MQ0=12;MQRankSum=-3.921;QD=66.09;ReadPosRankSum=0.230;VQSLOD=2.5972;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.28:0,93,4622	0/0:15,0:15:42.08:0,42,1819	0/0:41,0:12:17.06:0,17,223	0/0:42,0:22:34.84:0,35,831	0/0:35,0:35:99:0,102,5201	0/0:21,0:21:58.03:0,58,2798	0/0:31,0:31:72.16:0,72,2862	0/0:57,0:57:99:0,165,5704	0/0:51,0:51:99:0,135,6615	0/0:33,0:32:96.26:0,96,4174	0/0:27,0:27:78.24:0,78,4019	0/0:38,0:38:99:0,105,4493	0/0:34,0:34:87.24:0,87,3932	0/0:44,0:44:99:0,119,5842	0/0:49,0:49:99:0,126,6418	0/0:45,0:44:99:0,99,5010	0/0:39,0:36:99:0,99,4132	0/0:35,0:35:87.16:0,87,3580	0/0:28,0:26:69.17:0,69,2712	0/0:26,0:26:75.21:0,75,3899	0/0:88,0:89:99:0,229,10080	0/0:28,0:28:75.23:0,75,3633	0/0:34,0:34:93.27:0,93,4788	0/0:49,0:48:99:0,144,6467	1/1:7,13:21:51.06:1483,51,0	0/0:45,0:44:99:0,123,5901	0/0:44,0:44:99:0,132,5899	0/0:8,0:8:21.04:0,21,1060
chr10	83931379	.	TAC	T	2393.08	PASS	AB=0.987;AC=12;AF=0.214;AN=56;BaseQRankSum=6.878;DP=868;FS=2.990;HRun=0;HaplotypeScore=142.6905;InbreedingCoeff=0.5822;MQ=63.48;MQ0=13;MQRankSum=0.092;QD=10.54;ReadPosRankSum=2.707;VQSLOD=3.4667;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:34:27.61:28,0,139	0/0:2,0:10:24:0,24,232	0/0:45,0:24:23.99:0,24,297	0/0:38,0:28:44.24:0,44,605	0/0:25,1:26:32.31:0,32,1003	0/0:19,0:19:51.15:0,51,798	1/1:20,17:38:48.23:912,48,0	0/0:46,1:47:71.39:0,71,1592	0/0:29,0:30:69.21:0,69,1063	0/0:17,0:32:72.87:0,73,709	0/1:3,1:18:3.12:3,0,222	0/0:34,0:34:66.23:0,66,1075	0/0:26,0:26:69.19:0,69,1065	0/0:37,0:37:68.43:0,68,1355	1/1:10,27:37:69.22:849,69,0	0/0:9,0:21:46.07:0,46,398	0/0:12,0:29:62.29:0,62,556	1/1:8,30:37:51.16:628,51,0	0/0:26,0:24:46.93:0,47,634	0/0:20,1:21:14.26:0,14,739	0/0:79,0:79:99:0,171,2684	0/0:21,0:21:57.19:0,57,924	0/0:15,0:15:2.42:0,2,541	0/0:55,0:55:98.63:0,99,1977	1/1:18,0:18:17.56:104,18,0	0/1:33,0:33:32.47:32,0,399	0/0:27,1:28:38.33:0,38,1114	0/1:11,0:11:6.40:6,0,363
chr10	83931383	.	CACACACACACACAA	C	1524.21	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=6.810;DP=847;FS=3.822;HRun=0;HaplotypeScore=335.0622;InbreedingCoeff=0.2455;MQ=62.23;MQ0=13;MQRankSum=-3.662;QD=12.00;ReadPosRankSum=0.493;VQSLOD=1.6724;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:96.85:97,0,112	0/0:11,0:10:24.07:0,24,1109	0/0:41,0:21:25.24:0,25,488	0/0:35,0:24:50.97:0,51,1193	0/0:25,0:25:69.23:0,69,3706	0/0:19,0:19:54.16:0,54,2342	0/1:36,0:36:99:151,0,2286	0/0:46,0:46:99:0,118,4251	0/0:29,0:29:72.25:0,72,3395	0/0:34,0:33:90.27:0,90,4005	0/0:17,0:17:39.41:0,39,1610	0/0:33,0:33:73.49:0,73,4210	0/0:27,0:27:75.19:0,75,3268	0/0:35,0:35:93.30:0,93,4581	0/0:36,0:36:72.03:0,72,2989	0/0:20,0:20:49.70:0,50,2413	0/0:27,0:27:71.70:0,72,3179	0/0:40,0:39:59.69:0,60,2278	0/0:27,0:25:54.08:0,54,1670	0/0:20,0:20:57.20:0,57,2765	0/0:81,0:81:99:0,187,9044	0/0:21,0:21:57.20:0,57,3068	0/0:16,0:16:5.43:0,5,1665	0/0:52,0:52:99:0,102,6728	1/1:2,15:17:18.06:731,18,0	0/1:32,0:32:99:664,0,301	0/0:28,0:28:81.28:0,81,4328	0/1:11,0:11:6.40:6,0,363
chr10	83931385	.	CACACACACACAA	C	2270.51	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=6.107;DP=835;FS=0.680;HRun=0;HaplotypeScore=295.8561;InbreedingCoeff=0.9644;MQ=59.34;MQ0=12;MQRankSum=-3.904;QD=29.11;ReadPosRankSum=0.516;VQSLOD=2.3206;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:22.18:354,22,0	0/0:11,0:10:21.07:0,21,880	0/0:35,0:16:7.27:0,7,208	0/0:35,0:24:24.08:0,24,661	0/0:26,0:26:63.22:0,63,3013	0/0:19,0:19:42.14:0,42,1678	0/0:37,0:37:75.21:0,75,2617	0/0:47,0:47:97.52:0,98,3047	0/0:28,0:28:54.19:0,54,2488	0/0:33,0:32:75.25:0,75,3260	0/0:17,0:17:39.04:0,39,1383	0/0:31,0:31:67.46:0,67,3403	0/0:27,0:27:57.13:0,57,2374	0/0:35,0:35:72.25:0,72,3516	0/0:37,0:37:75.26:0,75,2844	0/0:20,0:20:45.15:0,45,2020	0/0:27,0:27:64.46:0,64,2606	0/0:37,0:36:60.21:0,60,2227	0/0:26,0:24:32.29:0,32,1128	0/0:20,0:20:42.14:0,42,2111	0/0:80,0:80:99:0,163,7209	0/0:21,0:21:48.16:0,48,2375	0/0:16,0:16:27.09:0,27,1223	0/0:53,0:53:99:0,105,5333	1/1:17,0:17:18.06:510,18,0	1/1:12,19:31:55.38:1546,55,0	0/0:28,0:28:69.24:0,69,3391	./.
chr10	83931387	.	CACACACACAA	C	2715.55	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=7.400;DP=832;FS=0.494;HRun=0;HaplotypeScore=259.0297;InbreedingCoeff=0.3032;MQ=58.29;MQ0=12;MQRankSum=-4.025;QD=15.70;ReadPosRankSum=-0.519;VQSLOD=2.3925;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,5:33:64.01:1312,64,0	0/1:11,0:10:28.29:28,0,671	0/0:34,0:14:16.24:0,16,334	0/0:35,0:24:54.96:0,55,1038	0/0:26,0:26:72.20:0,72,3005	0/0:19,0:19:51.17:0,51,1831	0/0:37,0:37:72.70:0,73,2170	0/0:48,0:48:99:0,134,4011	0/0:27,0:27:75.22:0,75,2671	0/1:34,0:33:66.82:67,0,2665	0/0:17,0:17:1.24:0,1,985	0/0:28,0:28:73.49:0,73,3250	0/0:27,0:27:72.18:0,72,2555	0/0:34,0:34:90.30:0,90,3564	0/0:33,0:33:75.26:0,75,2282	0/1:19,0:19:91.98:92,0,1485	0/1:28,0:28:49.96:50,0,1897	0/0:37,0:36:60.21:0,60,1830	0/0:26,0:24:52.25:0,52,1340	0/0:20,0:20:60.19:0,60,2149	0/0:82,0:82:99:0,211,7565	0/0:21,0:21:57.19:0,57,2416	0/0:18,0:18:47.82:0,48,1399	0/0:52,0:52:99:0,125,5346	1/1:17,0:17:18.06:426,18,0	0/1:31,0:31:99:892,0,133	0/0:28,0:28:81.26:0,81,3329	0/0:10,0:10:29.24:0,29,310
chr10	83931395	.	CAA	C	825.75	PASS	AB=0.992;AC=9;AF=0.161;AN=56;BaseQRankSum=12.697;DP=837;FS=2.545;HRun=3;HaplotypeScore=139.1668;InbreedingCoeff=0.0753;MQ=58.61;MQ0=15;MQRankSum=-1.506;QD=3.57;ReadPosRankSum=2.230;VQSLOD=0.0580;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,2:32:17.97:280,0,18	0/0:11,0:10:23.65:0,24,257	0/1:32,0:10:13.67:14,0,155	0/0:36,0:25:45.17:0,45,582	0/0:26,0:26:63.57:0,64,1178	0/0:23,0:23:69.04:0,69,1025	0/1:36,0:36:99:150,0,130	0/0:49,0:48:99:0,132,2021	0/0:28,0:28:84.19:0,84,1317	0/0:39,2:39:84.87:0,85,1047	0/0:17,0:17:11.32:0,11,299	0/0:26,0:26:75.24:0,75,1369	0/0:24,0:24:72.17:0,72,1236	0/0:35,0:35:99:0,101,1575	0/1:32,0:32:64.03:138,0,64	0/1:20,0:20:8.02:8,0,476	0/0:29,0:29:14.60:0,15,640	0/1:35,0:34:45.64:134,0,46	0/0:25,0:23:47.95:0,48,704	0/0:21,0:21:51.89:0,52,975	0/0:86,0:86:99:0,174,3404	0/0:21,0:21:60.18:0,60,1066	0/0:16,0:16:36.97:0,37,578	0/0:53,0:53:99:0,140,2299	1/1:15,0:15:17.25:91,17,0	0/1:29,0:29:99:155,0,193	0/0:29,0:29:76.89:0,77,1353	0/0:10,0:10:17.27:0,17,244
chr10	83931910	.	AAC	A	1594.85	PASS	AB=0.840;AC=25;AF=0.481;AN=52;BaseQRankSum=4.602;DP=625;FS=12.717;HRun=0;HaplotypeScore=87.7943;InbreedingCoeff=0.2317;MQ=64.43;MQ0=22;MQRankSum=2.819;QD=4.43;ReadPosRankSum=2.701;VQSLOD=1.2932;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:30:8.70:0,9,78	1/1:3,4:7:9.02:100,9,0	./.	./.	0/0:14,0:14:9.01:0,9,114	0/0:19,0:19:15.03:0,15,204	0/1:21,1:31:12.14:12,0,174	1/1:17,0:24:17.99:85,18,0	0/1:16,2:18:9.11:9,0,270	1/1:13,6:19:18.04:198,18,0	1/1:4,2:6:6.01:66,6,0	0/1:13,1:17:29.28:29,0,140	0/0:21,0:20:2.95:0,3,440	0/1:12,3:15:48.46:48,0,138	0/1:21,1:28:18.99:19,0,46	0/1:10,9:19:21.43:159,0,21	0/1:14,16:31:0.39:381,0,0	0/0:13,0:19:16.81:0,17,181	1/1:10,0:12:8.68:61,9,0	1/1:9,8:17:24.45:239,24,0	1/1:24,0:46:22.73:112,23,0	0/1:11,1:12:6.12:6,0,267	0/0:10,0:10:18.06:0,18,271	0/1:35,7:41:99:178,0,376	0/0:19,0:19:5.86:0,6,50	0/0:17,0:20:23.74:0,24,226	1/1:10,3:12:6.02:66,6,0	0/0:5,0:8:2.74:0,3,12
chr10	83932494	.	TC	T	4010.57	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=14.160;DP=622;FS=14.089;HRun=2;HaplotypeScore=67.6880;InbreedingCoeff=0.9997;MQ=76.01;MQ0=0;MQRankSum=-2.894;QD=34.87;ReadPosRankSum=2.634;VQSLOD=2.8676;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,46:46:99:1519,117,0	0/0:14,0:14:39.13:0,39,579	0/0:15,0:15:42.02:0,42,509	0/0:18,0:18:54.15:0,54,739	0/0:20,0:20:54.18:0,54,809	0/0:18,0:18:54.18:0,54,809	0/0:26,0:26:72.24:0,72,1077	0/0:25,0:25:72.23:0,72,1042	0/0:20,0:20:60.20:0,60,897	0/0:23,0:23:69.22:0,69,1015	0/0:14,0:14:39.12:0,39,552	0/0:21,0:21:60.20:0,60,898	0/0:15,0:15:45.15:0,45,675	0/0:16,0:16:48.15:0,48,700	0/0:26,0:26:72.24:0,72,1079	0/0:21,0:21:63.21:0,63,934	0/0:18,0:18:51.17:0,51,761	0/0:20,0:20:60.16:0,60,869	0/0:22,0:22:63.21:0,63,942	0/0:16,0:16:45.15:0,45,664	0/0:34,0:34:99:0,99,1462	0/0:24,0:24:72.24:0,72,1078	0/0:18,0:18:48.16:0,48,705	0/0:24,0:24:72.24:0,72,1079	1/1:1,19:20:51.17:662,51,0	1/1:1,38:39:99:1479,114,0	0/0:39,0:39:99:0,117,1753	1/1:0,10:10:27.09:350,27,0
chr10	83933715	.	C	CTCTT	5415.09	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-9.774;DP=621;FS=0.000;HRun=0;HaplotypeScore=104.6800;InbreedingCoeff=0.9952;MQ=91.68;MQ0=0;MQRankSum=-2.877;QD=60.84;ReadPosRankSum=0.782;VQSLOD=6.3368;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:90.31:0,90,1668	1/1:0,10:10:20.94:380,21,0	0/0:28,0:28:63.21:0,63,1139	0/0:24,0:24:53.54:0,54,909	0/0:24,0:24:66.23:0,66,1230	0/0:24,0:24:69.22:0,69,1255	0/0:23,0:23:69.22:0,69,1243	0/0:25,0:25:66.21:0,66,1175	0/0:16,0:16:45.15:0,45,839	1/1:2,18:20:60.16:1528,60,0	1/1:2,15:18:42.06:879,42,0	0/0:25,0:25:72.25:0,72,1343	0/0:22,0:22:60.18:0,60,1057	0/0:18,0:18:51.17:0,51,950	0/0:26,0:26:72.23:0,72,1296	1/1:1,16:17:51.14:1301,51,0	1/1:2,19:24:51.18:1327,51,0	0/0:31,0:31:93.32:0,93,1724	0/0:20,0:20:45.15:0,45,835	0/0:16,0:16:45.15:0,45,840	0/0:26,0:26:72.23:0,72,1312	0/0:26,0:26:78.25:0,78,1413	0/0:23,0:23:66.21:0,66,1198	0/0:25,0:25:72.25:0,72,1344	0/0:14,0:14:30.10:0,30,560	0/0:22,0:22:57.20:0,57,1059	0/0:34,0:34:99:0,102,1872	0/0:5,0:5:15.05:0,15,280
chr10	83933965	.	CCA	C	800.04	PASS	AB=0.904;AC=23;AF=0.479;AN=48;BaseQRankSum=2.948;DP=463;FS=1.554;HRun=0;HaplotypeScore=86.8378;InbreedingCoeff=0.3823;MQ=64.08;MQ0=7;MQRankSum=0.427;QD=3.17;ReadPosRankSum=1.478;VQSLOD=2.1792;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:27:12.28:63,0,12	1/1:4,1:5:2.88:15,3,0	./.	./.	0/0:5,0:5:6.02:0,6,90	0/1:8,2:10:53.41:53,0,74	1/1:25,0:28:2.84:14,3,0	1/1:21,0:19:2.98:22,3,0	0/0:19,0:20:33.05:0,33,412	1/1:8,0:9:2.83:14,3,0	./.	0/0:12,0:11:15.02:0,15,200	0/0:14,0:13:21.07:0,21,295	0/1:12,1:13:17.70:18,0,144	0/0:13,0:15:20.96:0,21,186	1/1:9,3:16:14.69:118,15,0	1/1:16,7:26:38.35:331,38,0	0/1:22,1:24:3.36:3,0,176	./.	1/1:8,3:10:3.01:33,3,0	1/1:26,13:40:15.04:164,15,0	0/0:10,0:12:12.03:0,12,157	0/1:9,0:13:18.77:19,0,66	0/0:30,0:47:33.01:0,33,349	0/0:11,0:11:3:0,3,26	0/0:8,0:7:6.01:0,6,69	1/1:2,4:6:9.02:98,9,0	0/0:4,0:4:12.04:0,12,163
chr10	83934357	.	GGCGCGTGCGCGC	G	747.99	PASS	AB=0.722;AC=6;AF=0.107;AN=56;BaseQRankSum=3.952;DP=417;FS=29.990;HRun=0;HaplotypeScore=165.3584;InbreedingCoeff=0.4300;MQ=76.59;MQ0=2;MQRankSum=-1.085;QD=22.00;ReadPosRankSum=-1.243;VQSLOD=0.9859;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:14:61.64:121,0,62	0/0:4,0:4:8.93:0,9,66	0/0:15,0:13:4.34:0,4,93	0/0:13,0:11:11.17:0,11,90	0/0:17,0:17:38.81:0,39,1896	0/0:18,0:17:42.14:0,42,2092	0/0:27,0:27:50.87:0,51,1204	0/0:22,0:22:9.03:0,9,380	0/0:13,0:13:27.09:0,27,1154	0/0:25,0:25:57.10:0,57,1226	0/0:3,0:3:2.74:0,3,25	0/0:8,0:8:18.05:0,18,689	0/0:14,0:14:33.10:0,33,1562	0/0:9,0:9:15.02:0,15,519	0/0:23,0:23:51.77:0,52,1404	0/0:10,0:9:17.95:0,18,319	0/0:18,0:18:0.33:0,0,421	0/0:23,0:23:46.24:0,46,1758	0/0:19,0:19:48.14:0,48,2112	0/0:8,0:8:15.05:0,15,815	0/0:32,0:32:85.17:0,85,4124	0/0:12,0:12:24.08:0,24,1093	0/0:12,0:12:27.08:0,27,1205	0/0:19,0:19:45.14:0,45,2295	1/1:2,2:9:9.48:122,9,0	0/1:5,5:10:3.94:581,0,4	0/0:19,0:19:45.14:0,45,1923	1/1:1,0:1:3.01:43,3,0
chr10	83934361	.	CGT	C	254.94	PASS	AB=0.818;AC=7;AF=0.125;AN=56;BaseQRankSum=6.475;DP=402;FS=4.520;HRun=0;HaplotypeScore=89.2859;InbreedingCoeff=0.6124;MQ=72.24;MQ0=3;MQRankSum=-0.344;QD=7.50;ReadPosRankSum=-1.111;VQSLOD=2.7159;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,1:16:20.87:185,21,0	0/0:3,0:3:5.95:0,6,45	0/0:11,0:9:4.29:0,4,71	0/0:12,0:10:11.17:0,11,90	0/0:20,0:20:30.47:0,30,510	0/0:19,0:18:35.09:0,35,560	0/0:29,0:29:37.54:0,38,300	0/0:15,0:15:9.02:0,9,109	0/0:11,0:11:24.90:0,25,309	0/0:22,0:22:41.73:0,42,312	0/0:2,0:2:2.81:0,3,26	0/0:8,0:8:18.01:0,18,219	0/0:11,0:11:31.61:0,32,383	0/0:6,0:6:15.02:0,15,194	0/0:24,0:24:33.36:0,33,456	0/0:10,0:9:10.82:0,11,89	0/0:18,0:18:4.34:0,4,153	0/0:22,0:22:34.97:0,35,540	0/0:19,0:19:24.78:0,25,616	0/0:7,1:8:6.74:0,7,192	0/0:34,0:34:69.18:0,69,1144	0/0:13,0:13:27.03:0,27,339	0/0:12,0:12:27.06:0,27,373	0/0:21,0:21:51.10:0,51,784	1/1:8,0:8:8.86:61,9,0	0/1:7,2:8:4.25:120,0,4	0/0:17,0:17:30.86:0,31,537	1/1:1,0:1:2.96:19,3,0
chr10	83934363	.	TGC	T	591.14	PASS	AB=0.962;AC=19;AF=0.365;AN=52;BaseQRankSum=7.104;DP=387;FS=18.071;HRun=0;HaplotypeScore=86.7051;InbreedingCoeff=0.3017;MQ=70.93;MQ0=3;MQRankSum=0.420;QD=2.79;ReadPosRankSum=2.537;VQSLOD=-0.1081;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:10.63:83,11,0	0/0:3,0:3:2.96:0,3,19	0/1:10,0:8:0:0,0,0	./.	0/0:20,0:20:36.43:0,36,436	0/0:19,0:18:13.54:0,14,372	0/1:28,0:30:9.96:103,0,10	0/0:10,0:10:3:0,3,27	0/1:12,0:12:2.07:2,0,177	1/1:17,1:19:7.56:131,8,0	0/1:1,0:1:0:0,0,0	0/0:6,0:6:8.97:0,9,94	0/0:11,0:11:14.22:0,14,247	0/0:6,0:6:8.95:0,9,91	0/1:16,2:19:90.72:92,0,91	0/1:10,0:9:7.20:38,0,7	1/1:18,1:18:5.06:102,5,0	0/1:21,2:23:75.13:75,0,172	0/1:18,0:18:1.89:2,0,292	0/0:9,0:9:14.26:0,14,196	0/0:32,4:36:39.04:0,39,743	0/0:12,0:12:18.88:0,19,213	0/0:13,0:13:23.40:0,23,203	0/0:19,0:19:46.29:0,46,638	1/1:10,0:10:5.59:26,6,0	1/1:9,0:8:14.16:69,14,0	0/1:15,1:16:22.74:23,0,322	./.
chr10	83934372	.	G	GCA	412.43	PASS	AB=0.990;AC=12;AF=0.222;AN=54;BaseQRankSum=4.364;DP=401;FS=0.000;HRun=0;HaplotypeScore=94.0082;InbreedingCoeff=0.5239;MQ=57.70;MQ0=3;MQRankSum=-1.362;QD=3.41;ReadPosRankSum=-3.685;VQSLOD=1.0679;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:28.65:29,0,37	1/1:2,0:2:5.92:41,6,0	0/0:6,0:3:2.98:0,3,22	./.	0/0:21,0:21:47.87:0,48,586	0/0:17,0:16:41.62:0,42,572	1/1:24,6:30:11:175,11,0	0/0:16,0:15:6.01:0,6,72	0/0:13,0:13:30:0,30,341	0/1:22,0:22:1.42:131,0,1	0/1:2,0:2:0:0,0,0	0/0:8,0:8:17.99:0,18,202	0/0:12,0:12:30.03:0,30,382	0/0:7,0:7:14.87:0,15,129	0/0:22,0:22:11.03:0,11,174	1/1:6,0:8:7.07:50,7,0	1/1:15,0:16:6.59:84,7,0	0/1:22,0:22:51.51:52,0,172	0/0:19,0:19:53.72:0,54,610	0/0:9,0:9:24:0,24,269	0/0:42,0:42:99:0,108,1229	0/0:11,0:11:27.03:0,27,332	0/0:13,0:13:26.98:0,27,340	0/0:19,0:19:54.10:0,54,715	0/0:9,0:9:5.93:0,6,39	0/0:10,0:9:4.31:0,4,89	0/0:16,0:16:42.05:0,42,529	0/0:6,0:5:17.88:0,18,130
chr10	83937422	.	A	AT	983.98	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.833;DP=621;FS=3.925;HRun=1;HaplotypeScore=64.4673;InbreedingCoeff=0.9996;MQ=60.94;MQ0=0;MQRankSum=0.855;QD=39.36;ReadPosRankSum=0.181;VQSLOD=4.2092;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:72.24:1079,72,0	0/0:11,0:11:33.11:0,33,429	0/0:24,0:21:58.64:0,59,745	0/0:19,0:17:48.14:0,48,591	0/0:27,0:27:78.25:0,78,1013	0/0:27,0:27:78.25:0,78,1013	0/0:23,0:23:66.19:0,66,840	0/0:26,0:26:75.23:0,75,948	0/0:15,0:15:45.15:0,45,584	0/0:27,0:27:81.25:0,81,1037	0/0:13,0:13:39.13:0,39,506	0/0:17,0:17:51.17:0,51,662	0/0:15,0:15:45.15:0,45,584	0/0:15,0:15:42.14:0,42,544	0/0:25,0:25:72.23:0,72,935	0/0:29,0:29:87.26:0,87,1112	0/0:22,0:22:63.19:0,63,803	0/0:18,0:18:42.14:0,42,545	0/0:22,0:22:63.20:0,63,817	0/0:24,0:24:69.22:0,69,896	0/0:30,0:30:87.27:0,87,1114	0/0:18,0:18:54.18:0,54,701	0/0:15,0:15:45.15:0,45,582	0/0:21,0:21:63.20:0,63,818	0/0:31,0:31:93.30:0,93,1208	0/0:34,0:34:99:0,102,1319	0/0:28,0:28:78.25:0,78,1012	0/0:20,0:20:57.19:0,57,740
chr10	83937579	.	CTGTTT	C	741.71	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.040;DP=655;FS=3.658;HRun=0;HaplotypeScore=124.7867;InbreedingCoeff=0.9370;MQ=78.48;MQ0=7;MQRankSum=-0.598;QD=24.72;ReadPosRankSum=1.826;VQSLOD=3.2570;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,19:30:45.15:837,45,0	0/0:13,0:13:30.10:0,30,839	0/0:43,0:36:36.11:0,36,775	0/0:32,0:24:20.99:0,21,488	0/0:25,0:25:51.18:0,51,1391	0/0:23,0:23:42.13:0,42,1141	0/0:24,0:24:51.18:0,51,1438	0/0:31,0:31:39.12:0,39,948	0/0:22,0:22:60.21:0,60,1708	0/0:25,0:25:57.20:0,57,1514	0/0:11,0:11:27.09:0,27,729	0/0:18,0:18:27.09:0,27,772	0/0:19,0:19:33.11:0,33,942	0/0:19,0:19:48.16:0,48,1323	0/0:15,0:15:30.10:0,30,839	0/0:24,0:24:63.20:0,63,1740	0/0:32,0:32:63.22:0,63,1764	0/0:26,0:25:57.20:0,57,1602	0/0:23,0:22:27.08:0,27,713	0/0:16,0:16:36.11:0,36,969	0/0:15,0:15:30.10:0,30,858	0/0:28,0:28:45.15:0,45,1229	0/0:22,0:22:57.20:0,57,1622	0/0:24,0:24:57.20:0,57,1528	0/0:20,0:20:42.14:0,42,1198	0/0:16,0:37:76.91:0,77,1240	0/0:26,0:26:60.21:0,60,1650	0/0:4,0:10:9.03:0,9,192
chr10	83938360	.	CCAGG	C	3800.81	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.043;DP=561;FS=1.020;HRun=0;HaplotypeScore=91.0102;InbreedingCoeff=0.9882;MQ=82.30;MQ0=1;MQRankSum=-2.703;QD=46.92;ReadPosRankSum=1.805;VQSLOD=4.3280;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,2758	1/1:0,7:7:18.06:359,18,0	0/0:16,0:16:42.14:0,42,996	0/0:18,0:18:40.36:0,40,983	0/0:21,0:21:63.17:0,63,1585	0/0:19,0:19:57.20:0,57,1540	0/0:20,0:20:60.21:0,60,1668	0/0:22,0:22:66.22:0,66,1719	0/0:14,0:14:42.14:0,42,1163	1/1:2,16:18:51.17:998,51,0	1/1:0,9:9:18.06:351,18,0	0/0:20,0:20:60.21:0,60,1679	0/0:15,0:15:45.14:0,45,1159	0/0:18,0:18:54.14:0,54,1295	0/0:19,0:19:54.19:0,54,1471	1/1:1,21:21:51.18:1014,51,0	1/1:0,25:25:54.19:1079,54,0	0/0:24,0:24:69.24:0,69,1931	0/0:22,0:22:66.22:0,66,1750	0/0:12,0:12:36.12:0,36,995	0/0:52,0:52:99:0,157,4323	0/0:7,0:7:21.07:0,21,548	0/0:9,0:9:27.09:0,27,750	0/0:45,0:45:99:0,129,3409	0/0:18,0:18:54.19:0,54,1505	0/0:23,1:24:12.30:0,12,1737	0/0:19,0:19:54.15:0,54,1378	0/0:12,0:12:36.12:0,36,1007
chr10	83939625	.	C	CT	814.87	PASS	AB=0.828;AC=13;AF=0.232;AN=56;BaseQRankSum=-1.921;DP=452;FS=7.736;HRun=14;HaplotypeScore=78.0931;InbreedingCoeff=0.4420;MQ=62.39;MQ0=1;MQRankSum=0.869;QD=4.85;ReadPosRankSum=-2.235;VQSLOD=1.4018;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:20:23.06:0,23,77	0/1:4,4:8:7.43:55,0,7	0/1:16,0:8:0.95:16,0,1	0/0:7,0:4:2.92:0,3,9	0/0:24,0:26:33.40:0,33,202	0/0:21,0:21:23.27:0,23,153	0/0:2,0:8:12.21:0,12,35	0/1:26,2:27:7.86:8,0,173	0/0:10,0:10:20.66:0,21,133	1/1:8,9:17:20.96:175,21,0	1/1:3,9:13:13.57:166,14,0	0/0:12,0:12:17.60:0,18,115	0/0:9,0:9:14.69:0,15,96	0/0:12,0:12:14.65:0,15,95	0/1:14,2:16:2.73:3,0,109	1/1:10,7:17:1.41:124,1,0	0/1:15,15:31:35.39:198,0,35	0/0:43,0:43:66.60:0,67,428	0/0:15,0:15:18.87:0,19,111	0/0:12,0:12:11.09:0,11,76	0/0:7,0:7:11.76:0,12,77	0/0:10,0:10:1.98:0,2,17	0/0:9,0:9:13:0,13,80	0/0:6,0:6:5.54:0,6,38	1/1:16,5:20:18.51:229,19,0	0/0:6,0:17:22.36:0,22,64	0/0:15,0:15:28.93:0,29,190	0/0:13,0:22:3.69:0,4,40
chr10	83939642	.	CTTTA	C	1003.53	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=6.334;DP=366;FS=1.943;HRun=0;HaplotypeScore=65.2082;InbreedingCoeff=0.7165;MQ=53.24;MQ0=5;MQRankSum=-5.933;QD=16.19;ReadPosRankSum=2.310;VQSLOD=3.3420;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,11:16:18.05:275,18,0	0/0:7,0:7:6.02:0,6,117	./.	./.	0/0:19,0:19:21.07:0,21,488	0/0:17,0:17:21.07:0,21,519	0/0:10,0:10:18.06:0,18,389	0/0:29,0:28:45.15:0,45,1097	0/0:8,0:8:9.03:0,9,220	0/0:13,0:13:30.10:0,30,701	0/0:15,0:15:18.06:0,18,413	0/0:9,0:9:2.96:0,3,24	0/0:8,0:8:6.02:0,6,148	0/0:6,0:6:9.02:0,9,173	0/0:13,0:13:18.06:0,18,394	0/0:8,0:8:15.05:0,15,340	0/0:27,0:25:30.10:0,30,702	0/0:41,0:39:62.77:0,63,1395	0/0:16,0:15:30.10:0,30,703	0/0:11,0:11:24.04:0,24,537	0/0:5,0:5:6.02:0,6,148	0/0:4,0:4:6.02:0,6,148	0/0:5,0:5:3.01:0,3,74	0/0:4,0:4:3.01:0,3,71	1/1:11,5:15:9.01:123,9,0	1/1:5,11:15:30.10:501,30,0	0/0:16,0:16:24.08:0,24,558	1/1:8,5:12:15.05:251,15,0
chr10	83940378	.	C	CT	2684.57	PASS	AB=0.637;AC=11;AF=0.196;AN=56;BaseQRankSum=-5.836;DP=646;FS=4.975;HRun=11;HaplotypeScore=71.7109;InbreedingCoeff=0.6302;MQ=61.87;MQ0=12;MQRankSum=-0.193;QD=14.91;ReadPosRankSum=-0.083;VQSLOD=4.1197;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,28:40:44.92:441,45,0	0/1:4,3:7:11.22:69,0,11	0/0:10,0:5:8.24:0,8,42	0/0:10,0:5:5.77:0,6,37	0/0:22,0:24:46.62:0,47,375	0/0:16,1:18:7.43:0,7,231	0/0:25,0:25:61.58:0,62,470	0/0:36,0:35:62.05:0,62,472	0/0:15,0:14:26.84:0,27,207	1/1:4,18:20:51.04:498,51,0	0/1:14,15:29:17.50:353,0,17	0/0:17,0:18:43.85:0,44,331	0/0:18,0:19:41.80:0,42,324	0/0:17,0:17:38.82:0,39,302	0/0:25,0:25:50.72:0,51,395	0/1:3,13:13:10.30:268,0,10	1/1:7,31:36:60.93:799,61,0	0/0:25,0:24:53.69:0,54,418	0/0:27,0:28:61.76:0,62,468	0/0:25,0:25:67.95:0,68,518	0/0:25,0:24:56.74:0,57,441	0/0:23,0:23:53.76:0,54,416	0/0:22,0:22:16.61:0,17,316	0/0:31,1:31:12.85:0,13,456	1/1:14,13:28:27.73:428,28,0	0/0:11,0:29:41.44:0,41,134	0/0:29,0:27:50.75:0,51,394	0/0:1,0:7:13.17:0,13,53
chr10	83940397	.	C	CT	507.47	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.832;DP=627;FS=2.071;HRun=7;HaplotypeScore=71.3962;InbreedingCoeff=0.7306;MQ=56.01;MQ0=28;MQRankSum=-1.134;QD=18.12;ReadPosRankSum=1.335;VQSLOD=3.5585;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:56.66:0,57,509	0/0:10,0:9:17.98:0,18,173	0/0:9,0:3:2.97:0,3,21	0/0:8,0:3:2.36:0,2,8	0/0:31,0:28:72.06:0,72,686	0/0:19,0:19:48.08:0,48,463	0/0:27,0:27:60.06:0,60,572	0/0:28,0:27:50.91:0,51,492	0/0:14,0:13:36.06:0,36,346	0/0:24,0:21:47.98:0,48,436	0/0:31,0:30:57.08:0,57,549	0/0:18,0:18:39.02:0,39,360	0/0:20,0:17:32.99:0,33,318	0/0:14,0:14:24.02:0,24,231	0/0:18,0:17:39.03:0,39,366	0/0:22,0:18:39:0,39,366	0/0:39,0:37:78.07:0,78,736	0/0:23,0:21:54.07:0,54,515	0/0:23,0:23:54.03:0,54,504	0/0:27,0:26:66.08:0,66,631	0/0:21,0:20:45.05:0,45,429	0/0:18,0:17:51.08:0,51,492	0/0:23,0:22:51.05:0,51,491	0/0:33,0:29:72.01:0,72,675	1/1:7,21:26:51.14:602,51,0	0/0:26,0:23:54.08:0,54,521	0/0:28,0:25:63.09:0,63,605	0/0:8,0:8:12.01:0,12,116
chr10	83942305	.	TTG	T	1540.96	PASS	AB=0.524;AC=3;AF=0.054;AN=56;BaseQRankSum=8.553;DP=684;FS=3.568;HRun=0;HaplotypeScore=93.6782;InbreedingCoeff=0.6864;MQ=91.73;MQ0=0;MQRankSum=-0.400;QD=29.63;ReadPosRankSum=1.407;VQSLOD=4.9483;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,105,1820	0/0:12,0:12:36.12:0,36,630	0/0:32,0:32:52.69:0,53,1453	0/0:27,0:27:75.02:0,75,1222	0/0:27,0:27:78.27:0,78,1366	0/0:18,0:18:51.16:0,51,856	0/0:23,0:24:69.21:0,69,1158	0/0:28,0:28:78.27:0,78,1367	0/0:21,0:21:60.21:0,60,1064	0/0:28,0:28:81.28:0,81,1438	0/0:23,0:23:63.22:0,63,1094	0/0:28,0:28:81.28:0,81,1429	0/0:24,0:24:72.25:0,72,1271	0/0:20,0:20:60.21:0,60,1057	0/0:28,0:28:84.29:0,84,1485	0/0:25,0:24:72.25:0,72,1260	0/0:17,0:17:51.15:0,51,864	0/0:27,0:27:78.23:0,78,1329	0/0:28,0:28:75.25:0,75,1275	0/0:25,0:25:72.23:0,72,1236	0/0:28,0:28:81.28:0,81,1428	0/0:25,0:25:72.25:0,72,1278	0/0:20,0:20:54.19:0,54,958	0/0:21,0:21:60.21:0,60,1044	0/0:15,0:15:45.15:0,45,791	0/1:3,30:33:10.27:1070,0,10	0/0:21,0:21:57.20:0,57,1002	1/1:0,19:19:42.14:577,42,0
chr10	83948298	.	AT	A	1453.25	PASS	AC=2;AF=0.043;AN=46;BaseQRankSum=4.959;DP=542;FS=2.990;HRun=1;HaplotypeScore=79.6310;InbreedingCoeff=0.9995;MQ=91.81;MQ0=0;MQRankSum=-3.283;QD=35.45;ReadPosRankSum=1.558;VQSLOD=4.0211;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:41:99:1546,111,0	./.	0/0:24,0:24:38.61:0,39,837	0/0:22,0:22:63.16:0,63,925	0/0:15,0:15:45.15:0,45,719	0/0:16,0:16:48.10:0,48,694	0/0:34,0:33:96.33:0,96,1520	0/0:27,0:27:78.23:0,78,1162	0/0:18,0:18:54.18:0,54,862	./.	./.	0/0:30,0:30:90.27:0,90,1388	0/0:25,0:25:75.24:0,75,1165	0/0:28,0:28:81.26:0,81,1268	0/0:26,0:26:78.25:0,78,1201	./.	./.	0/0:21,0:20:63.21:0,63,997	0/0:13,0:13:39.13:0,39,596	0/0:21,0:21:60.20:0,60,956	0/0:35,0:35:99:0,99,1453	0/0:21,0:21:63.21:0,63,1002	0/0:11,0:11:33.09:0,33,499	0/0:35,0:35:99:0,105,1621	0/0:14,0:14:42.13:0,42,648	0/0:25,0:25:72.15:0,72,1094	0/0:23,0:23:69.24:0,69,1098	0/0:17,0:17:51.17:0,51,810
chr10	83948351	.	A	ACG	818.37	PASS	AB=1.000;AC=8;AF=0.154;AN=52;BaseQRankSum=7.866;DP=561;FS=3.409;HRun=0;HaplotypeScore=136.2161;InbreedingCoeff=0.3592;MQ=60.97;MQ0=7;MQRankSum=-0.553;QD=8.18;ReadPosRankSum=-3.364;VQSLOD=2.4952;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:36,6:42:81.39:870,81,0	./.	./.	0/0:24,0:11:11.93:0,12,91	0/0:18,0:18:42.43:0,42,372	0/0:13,0:13:29.27:0,29,252	0/0:38,0:36:36.92:0,37,449	0/0:18,0:17:48.33:0,48,400	0/0:17,0:17:47.83:0,48,433	0/1:7,0:7:10.68:11,0,29	0/0:9,0:9:2.47:0,2,19	0/0:29,0:28:74.93:0,75,709	0/0:16,0:15:29.61:0,30,284	0/0:24,0:24:19.96:0,20,479	0/0:27,0:25:26.94:0,27,219	1/1:15,0:15:2.18:38,2,0	0/1:15,0:15:5.36:13,0,5	0/0:23,0:22:20.34:0,20,260	0/0:19,0:19:30.87:0,31,253	0/0:14,0:14:13.75:0,14,202	0/0:33,0:33:16.03:0,16,204	0/0:26,0:26:37.31:0,37,502	0/0:16,0:17:4.65:0,5,301	0/0:34,0:34:86.96:0,87,895	0/0:18,0:18:14.40:0,14,159	0/0:31,0:30:22.36:0,22,316	0/1:12,0:12:1.44:1,0,135	0/1:9,0:9:11.64:12,0,73
chr10	83948353	.	G	GCACGCA	4309.05	PASS	AB=0.667;AC=31;AF=0.574;AN=54;BaseQRankSum=1.799;DP=585;FS=11.072;HRun=0;HaplotypeScore=179.3828;InbreedingCoeff=0.8449;MQ=58.40;MQ0=9;MQRankSum=-3.060;QD=14.13;ReadPosRankSum=-4.310;VQSLOD=2.4488;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:34.49:0,34,515	1/1:4,0:4:3.01:36,3,0	./.	0/0:22,0:10:4.29:0,4,65	0/0:17,0:17:47.94:0,48,457	0/0:12,0:13:9.95:0,10,275	1/1:38,0:36:62.27:526,62,0	1/1:19,0:18:42.33:313,42,0	0/0:19,0:19:44.94:0,45,489	1/1:7,0:7:14.66:113,15,0	1/1:11,0:11:7.81:54,8,0	0/0:29,0:33:72:0,72,890	0/0:16,0:15:29.78:0,30,375	0/0:22,0:23:57.52:0,58,705	1/1:27,0:25:35.86:309,36,0	1/1:15,0:15:7.05:216,7,0	1/1:16,0:16:22.69:268,23,0	1/1:24,0:22:51:332,51,0	1/1:5,12:18:33.64:288,34,0	1/1:16,0:16:24.29:265,24,0	1/1:36,0:36:29.53:373,30,0	0/0:20,0:27:44.48:0,44,682	0/0:16,0:16:42.89:0,43,429	0/0:31,0:34:92.65:0,93,1260	0/1:9,0:18:44.58:45,0,141	1/1:33,0:32:83.58:609,84,0	1/1:12,0:12:26.80:305,27,0	1/1:11,0:10:23.42:258,23,0
chr10	83950951	.	GCACAGT	G	5333.91	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=9.943;DP=647;FS=34.348;HRun=0;HaplotypeScore=153.4554;InbreedingCoeff=0.9703;MQ=75.24;MQ0=0;MQRankSum=-10.473;QD=42.67;ReadPosRankSum=1.828;VQSLOD=3.0852;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,105,3605	1/1:2,8:10:18.06:380,18,0	0/0:21,0:23:62.83:0,63,1738	0/0:21,0:21:49.97:0,50,1356	0/0:19,0:19:51.18:0,51,1705	0/0:22,0:22:57.20:0,57,1911	0/0:32,0:32:81.28:0,81,2820	0/0:32,0:32:84.27:0,84,2477	0/0:28,0:28:78.27:0,78,2650	1/1:5,19:24:48.13:1048,48,0	1/1:2,12:14:27.09:585,27,0	0/0:42,0:42:99:0,105,3507	0/0:27,0:27:60.21:0,60,2080	0/0:23,0:23:54.19:0,54,1870	1/1:1,21:22:42.14:897,42,0	1/1:3,16:19:36.12:822,36,0	1/1:3,7:10:15.05:307,15,0	1/1:2,3:5:9.03:205,9,0	0/0:15,0:15:39.10:0,39,1118	0/0:22,0:22:60.19:0,60,1942	0/0:46,0:46:99:0,111,3742	0/0:28,0:28:78.27:0,78,2682	0/0:20,0:20:54.19:0,54,1723	0/0:31,0:31:72.21:0,72,2393	0/0:17,0:17:39.13:0,39,1324	1/1:5,14:19:42.14:952,42,0	0/0:31,0:31:72.25:0,72,2376	1/1:0,2:2:6.02:137,6,0
chr10	83951132	.	G	GACAC	5976.05	PASS	AB=0.998;AC=26;AF=0.464;AN=56;BaseQRankSum=6.736;DP=1065;FS=5.184;HRun=0;HaplotypeScore=544.2275;InbreedingCoeff=0.2068;MQ=40.15;MQ0=20;MQRankSum=-5.978;QD=9.88;ReadPosRankSum=-4.289;VQSLOD=1.3050;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:52:10.31:0,10,479	1/1:18,7:25:11.55:210,12,0	0/0:43,0:12:8.99:0,9,98	0/0:48,0:19:3.27:0,3,90	0/0:25,0:25:14.99:0,15,247	0/1:20,0:22:42.03:42,0,187	1/1:36,0:49:52.03:385,52,0	0/0:44,0:43:30.39:0,30,627	0/1:30,0:31:35:35,0,288	1/1:43,5:48:52.30:1121,52,0	1/1:34,5:38:14.77:289,15,0	0/1:45,0:45:48.60:49,0,467	0/1:42,0:42:99:108,0,496	0/1:33,0:32:55.78:56,0,189	1/1:25,16:41:34.65:902,35,0	1/1:15,19:37:59.89:1077,60,0	1/1:5,10:13:28.32:535,28,0	1/1:8,11:19:44.45:885,44,0	0/1:26,0:20:27.26:27,0,142	0/1:37,0:38:9.57:10,0,454	0/0:76,0:74:72.83:0,73,1359	0/0:44,0:44:3.71:0,4,606	0/0:31,0:31:21.27:0,21,462	0/0:35,0:39:5.16:0,5,171	0/0:50,0:51:60.56:0,61,1104	0/1:30,0:35:88.95:89,0,156	0/1:37,0:38:99:113,0,316	0/1:11,0:15:44.35:44,0,84
chr10	83951152	.	C	CT	2585.30	PASS	AB=0.842;AC=16;AF=0.286;AN=56;BaseQRankSum=16.953;DP=1106;FS=57.391;HRun=0;HaplotypeScore=517.2995;InbreedingCoeff=-0.3649;MQ=40.39;MQ0=22;MQRankSum=-8.862;QD=4.68;ReadPosRankSum=0.762;VQSLOD=1.5001;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,15:54:21.08:0,21,651	0/1:14,9:24:4.63:210,0,5	0/0:54,0:16:41.79:0,42,508	0/0:53,0:19:40.23:0,40,431	0/0:18,7:28:17.53:0,18,250	0/1:18,3:21:99:108,0,184	0/1:43,5:47:99:103,0,241	0/1:33,1:33:37.41:37,0,943	0/1:25,5:34:99:178,0,378	0/1:45,8:53:99:275,0,802	0/0:31,5:35:14.18:0,14,257	0/1:33,12:46:99:220,0,494	0/1:39,8:46:99:390,0,841	0/1:29,9:37:40.82:41,0,420	0/0:42,4:45:42.08:0,42,612	0/1:34,4:38:99:159,0,214	0/1:17,0:15:26.37:26,0,151	0/0:23,0:23:54.58:0,55,552	0/1:13,4:12:99:148,0,294	0/1:34,5:40:2.36:2,0,670	0/0:73,11:80:99:0,130,1648	0/0:34,11:45:18.11:0,18,615	0/0:25,4:31:3.77:0,4,423	0/0:33,6:41:23.66:0,24,260	0/0:43,11:53:70.04:0,70,1093	0/1:32,4:38:99:254,0,538	0/1:25,13:38:99:372,0,312	0/1:11,5:17:99:219,0,148
chr10	83951160	.	ATAC	A	1623.84	PASS	AB=0.888;AC=14;AF=0.250;AN=56;BaseQRankSum=16.625;DP=1024;FS=53.450;HRun=0;HaplotypeScore=506.3341;InbreedingCoeff=-0.3349;MQ=43.00;MQ0=11;MQRankSum=-8.178;QD=3.73;ReadPosRankSum=3.398;VQSLOD=-0.3123;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,7:49:47.30:0,47,1626	0/1:15,8:23:99:233,0,112	0/0:49,0:18:50.87:0,51,1160	0/0:53,0:23:11.84:0,12,750	0/0:20,3:23:17.20:0,17,418	0/1:17,2:19:40.30:40,0,382	0/1:34,5:38:16.31:16,0,863	0/1:27,2:29:40.15:40,0,1423	0/1:27,5:32:50.35:50,0,959	0/1:41,5:45:99:288,0,1672	0/0:29,2:31:28.82:0,29,672	0/1:35,6:41:40.87:41,0,880	0/1:38,7:45:99:202,0,1589	0/0:30,6:36:20.74:0,21,1108	0/0:46,3:47:85.40:0,85,2309	0/1:35,4:39:99:151,0,1171	0/1:16,0:14:0.90:1,0,701	0/0:23,0:23:28.53:0,29,1426	0/1:13,1:11:46.31:46,0,565	0/0:32,3:35:1.34:0,1,1198	0/0:74,7:79:99:0,142,3278	0/0:32,7:39:40.91:0,41,1054	0/0:24,3:27:33.54:0,34,828	0/0:37,3:40:21.54:0,22,460	0/0:44,8:52:76.75:0,77,1776	0/1:33,4:37:99:193,0,1629	0/1:25,11:36:99:313,0,538	0/1:18,1:19:99:160,0,733
chr10	83951163	.	C	CT	982.31	PASS	AB=0.810;AC=10;AF=0.179;AN=56;BaseQRankSum=16.044;DP=999;FS=58.958;HRun=0;HaplotypeScore=476.0960;InbreedingCoeff=-0.2270;MQ=43.32;MQ0=11;MQRankSum=-10.733;QD=2.99;ReadPosRankSum=4.479;VQSLOD=1.3001;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,2:49:57.85:0,58,929	0/1:17,5:22:55.41:148,0,55	0/0:52,0:22:53.75:0,54,713	0/0:56,0:24:45.57:0,46,528	0/0:14,7:22:14.52:0,15,209	0/1:10,6:18:34.17:34,0,145	0/0:33,4:36:47.65:0,48,560	0/0:28,2:30:6.19:0,6,835	0/1:21,8:31:44.68:45,0,541	0/1:37,6:42:84.25:84,0,904	0/0:20,10:30:29.87:0,30,397	0/1:29,6:40:39.30:39,0,391	0/1:35,9:44:99:100,0,863	0/0:25,8:35:23.27:0,23,602	0/0:47,2:47:93.46:0,93,1315	0/1:31,7:39:94.28:94,0,643	0/0:16,1:15:22.46:0,22,409	0/0:22,0:23:36.65:0,37,811	0/0:10,0:9:9.25:0,9,318	0/0:23,9:33:30.52:0,31,648	0/0:76,0:75:99:0,141,1921	0/0:26,9:38:39.84:0,40,585	0/0:16,9:26:32.12:0,32,461	0/0:30,7:38:18.53:0,19,252	0/0:42,7:50:72.52:0,73,982	0/1:34,2:36:99:120,0,929	0/1:28,6:36:99:308,0,273	0/1:12,2:19:99:154,0,405
chr10	83951165	.	ATG	A	971.58	PASS	AB=0.868;AC=11;AF=0.196;AN=56;BaseQRankSum=16.322;DP=996;FS=48.330;HRun=0;HaplotypeScore=480.3217;InbreedingCoeff=-0.2503;MQ=43.31;MQ0=11;MQRankSum=-8.191;QD=2.50;ReadPosRankSum=5.098;VQSLOD=0.3316;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,2:48:36.15:0,36,1417	0/1:16,6:22:87.94:195,0,88	0/0:52,0:23:63.20:0,63,1194	0/1:58,0:23:4.91:5,0,586	0/0:15,7:22:14.47:0,14,304	0/1:15,3:18:72.65:73,0,219	0/0:36,1:36:44.46:0,44,995	0/0:23,2:25:16.23:0,16,1148	0/1:26,4:31:80.62:81,0,802	0/1:35,9:43:99:135,0,1322	0/0:20,10:30:28.84:0,29,607	0/1:33,7:40:42.65:43,0,619	0/1:37,7:44:99:148,0,1292	0/0:27,7:35:3.10:0,3,860	0/0:48,1:47:73.51:0,74,2004	0/1:36,2:39:45.76:46,0,1076	0/0:16,1:15:14.41:0,14,647	0/0:23,0:23:51.18:0,51,1204	0/0:10,0:9:19.30:0,19,480	0/0:27,6:33:25.01:0,25,970	0/0:75,0:74:99:0,138,2744	0/0:29,7:37:33.05:0,33,829	0/0:22,4:26:32.72:0,33,670	0/0:37,1:38:17.68:0,18,327	0/0:43,7:50:55.94:0,56,1382	0/1:35,2:37:97.31:97,0,1430	0/1:31,5:36:99:162,0,429	0/1:13,6:20:99:133,0,609
chr10	83951168	.	CACA	C	949.48	PASS	AB=0.878;AC=12;AF=0.214;AN=56;BaseQRankSum=15.473;DP=975;FS=57.215;HRun=0;HaplotypeScore=478.4948;InbreedingCoeff=-0.2823;MQ=43.65;MQ0=9;MQRankSum=-9.742;QD=2.73;ReadPosRankSum=2.484;VQSLOD=-0.6262;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,8:48:60.53:0,61,1757	0/1:13,7:21:99:133,0,123	0/0:48,0:23:62.91:0,63,1509	0/0:51,0:23:33.71:0,34,898	0/0:19,3:23:14.49:0,14,370	0/1:15,2:17:25.96:26,0,276	0/0:32,5:36:51.05:0,51,1210	0/0:25,1:26:18.52:0,19,1486	0/1:26,5:31:18.34:18,0,995	0/1:37,4:41:35.78:36,0,1762	0/0:27,2:29:30.01:0,30,740	0/1:30,7:37:25.10:25,0,764	0/1:34,7:42:99:188,0,1592	0/0:29,6:35:27.73:0,28,1081	0/0:47,3:48:96.64:0,97,2443	0/1:35,4:39:99:122,0,1322	0/1:17,0:15:7.21:7,0,776	0/0:23,0:23:63.05:0,63,1491	0/1:9,1:10:25.75:26,0,633	0/0:27,3:31:0.99:0,1,1131	0/0:66,6:71:99:0,138,3302	0/0:29,7:36:35.92:0,36,952	0/0:23,3:26:27.35:0,27,805	0/0:33,4:37:18.01:0,18,443	0/0:43,7:50:67.87:0,68,1660	0/1:32,4:36:99:148,0,1769	0/1:25,11:36:99:264,0,542	0/1:19,1:20:99:105,0,743
chr10	83951240	.	TATATATATATATATATATATATATATATATATAC	T	759.01	PASS	AB=1.000;AC=11;AF=0.275;AN=40;BaseQRankSum=0.566;DP=136;FS=1.259;HRun=0;HaplotypeScore=107.4112;InbreedingCoeff=0.1000;MQ=45.30;MQ0=5;MQRankSum=-0.870;QD=9.99;ReadPosRankSum=0.024;VQSLOD=2.1633;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:10:0.14:98,0,0	1/1:1,0:1:2.50:9,2,0	./.	0/1:5,0:2:0:0,0,0	./.	./.	0/0:4,0:4:6.02:0,6,113	0/0:13,0:12:33.10:0,33,1332	./.	0/1:7,0:7:5:5,0,298	0/0:6,0:6:7.25:0,7,77	./.	0/0:1,0:1:3:0,3,25	./.	0/1:16,0:16:38.15:38,0,340	0/0:4,0:4:12.02:0,12,188	0/1:9,0:8:15.88:16,0,24	0/1:7,0:6:41.79:42,0,447	0/0:1,0:1:3.01:0,3,90	0/0:1,0:1:2.74:0,3,12	./.	0/0:1,0:1:3:0,3,25	./.	0/0:2,0:2:3.01:0,3,49	1/1:0,20:20:9.03:664,9,0	0/0:4,0:4:2.08:0,2,198	0/0:2,0:2:6.02:0,6,349	0/0:11,0:11:17.69:0,18,1092
chr10	83951268	.	TATATAC	T	1365.33	PASS	AB=1.000;AC=30;AF=0.600;AN=50;BaseQRankSum=2.709;DP=167;FS=27.756;HRun=0;HaplotypeScore=59.5635;InbreedingCoeff=0.5753;MQ=54.97;MQ0=5;MQRankSum=-0.642;QD=9.89;ReadPosRankSum=3.842;VQSLOD=0.2182;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:15:9.66:127,10,0	1/1:3,0:3:2.94:18,3,0	0/0:6,0:5:11.97:0,12,106	0/1:9,0:5:0.82:1,0,26	0/0:2,0:2:5.99:0,6,48	0/0:1,0:1:2.99:0,3,24	1/1:6,0:6:14.91:117,15,0	1/1:16,0:15:23.03:248,23,0	./.	1/1:7,0:7:5.88:71,6,0	./.	0/0:5,0:5:14.97:0,15,121	0/0:1,0:1:2.99:0,3,24	0/0:1,0:1:2.99:0,3,23	1/1:13,4:17:15:216,15,0	1/1:4,0:4:3.01:34,3,0	1/1:11,0:10:14.77:94,15,0	1/1:8,2:8:17.03:240,17,0	1/1:6,0:6:14.96:119,15,0	1/1:1,0:1:2.99:24,3,0	1/1:3,0:3:2.99:24,3,0	./.	0/0:2,0:2:5.99:0,6,48	0/0:2,0:2:5.99:0,6,48	1/1:20,0:20:8.96:118,9,0	0/1:6,0:6:6.02:6,0,107	1/1:3,0:3:8.99:79,9,0	0/0:6,0:6:8.99:0,9,88
chr10	83951272	.	TAC	T	1365.49	PASS	AB=1.000;AC=29;AF=0.558;AN=52;BaseQRankSum=2.902;DP=190;FS=36.963;HRun=0;HaplotypeScore=53.5781;InbreedingCoeff=0.7369;MQ=55.64;MQ0=5;MQRankSum=-2.117;QD=9.42;ReadPosRankSum=2.684;VQSLOD=1.0016;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:15:20.26:145,20,0	1/1:3,0:3:2.94:18,3,0	0/0:6,0:5:11.97:0,12,106	0/1:13,0:6:0.82:1,0,26	0/0:2,0:2:5.99:0,6,48	0/0:2,0:2:2.99:0,3,24	1/1:8,0:8:20.90:164,21,0	1/1:17,0:16:34.58:308,35,0	./.	1/1:8,0:8:17.61:111,18,0	./.	0/0:6,0:6:17.97:0,18,146	0/0:1,0:1:2.99:0,3,24	0/0:3,0:3:8.97:0,9,71	1/1:15,1:16:14.97:125,15,0	1/1:5,0:5:5.03:30,5,0	1/1:11,0:10:17.74:114,18,0	1/1:10,0:8:17.45:132,17,0	1/1:1,7:8:20.93:165,21,0	1/1:1,0:1:2.99:24,3,0	1/1:6,0:6:11.97:95,12,0	0/0:3,0:3:8.97:0,9,71	0/0:2,0:2:5.99:0,6,48	0/0:5,0:5:14.96:0,15,118	1/1:20,0:20:8.91:62,9,0	0/0:8,0:8:17.49:0,17,171	1/1:2,1:3:8.73:60,9,0	0/0:4,0:4:8.98:0,9,78
chr10	83951336	.	GA	G	686.80	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.341;DP=479;FS=0.000;HRun=11;HaplotypeScore=79.8481;InbreedingCoeff=0.8946;MQ=69.58;MQ0=1;MQRankSum=-2.180;QD=18.56;ReadPosRankSum=-0.282;VQSLOD=4.2611;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:81.04:0,81,827	0/0:4,0:4:6.02:0,6,64	0/0:17,0:13:13.40:0,13,149	0/0:19,1:17:20.30:0,20,216	0/0:11,0:11:30.06:0,30,308	0/0:11,0:11:33.08:0,33,351	0/0:26,0:26:61.52:0,62,364	0/0:13,0:13:30.07:0,30,314	0/0:0,0:6:11.40:0,11,57	0/0:20,0:20:51.07:0,51,517	0/0:17,1:17:14.96:0,15,351	0/0:19,0:19:54.12:0,54,568	0/0:13,0:13:36.09:0,36,382	0/0:13,0:12:36.09:0,36,382	0/0:34,0:34:87.05:0,87,886	0/0:20,0:22:65.80:0,66,654	0/0:18,1:20:50.96:0,51,519	0/0:17,1:18:23.37:0,23,419	0/0:10,0:11:20.92:0,21,205	0/0:5,0:5:12.03:0,12,128	0/0:20,0:20:42.09:0,42,439	0/0:9,0:9:25.31:0,25,258	0/0:13,0:13:35.98:0,36,353	0/0:25,0:26:75.02:0,75,782	0/0:26,0:27:35.13:0,35,483	1/1:3,17:19:50.87:415,51,0	0/0:12,0:13:38.93:0,39,395	1/1:1,16:17:47.94:393,48,0
chr10	83951558	.	CA	C	298.55	PASS	AB=0.798;AC=10;AF=0.185;AN=54;BaseQRankSum=-0.244;DP=532;FS=3.828;HRun=17;HaplotypeScore=110.9712;InbreedingCoeff=0.2635;MQ=58.57;MQ0=5;MQRankSum=5.845;QD=1.72;ReadPosRankSum=5.775;VQSLOD=-0.3902;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:30:36.93:0,37,280	./.	0/0:24,0:7:9.73:0,10,55	0/0:13,0:4:5.71:0,6,32	0/1:13,0:13:1.28:1,0,78	0/0:14,0:14:8.95:0,9,68	1/1:11,15:27:22.13:122,22,0	0/1:17,4:22:8.72:42,0,9	0/0:15,0:15:14.82:0,15,107	0/0:23,0:23:31.90:0,32,177	0/0:10,0:10:12.55:0,13,71	0/0:23,1:25:21.77:0,22,233	0/0:24,1:33:22.98:0,23,238	0/0:24,2:25:13.95:0,14,161	0/0:29,0:29:54.97:0,55,306	0/0:33,0:32:45.75:0,46,239	0/0:14,0:14:19.75:0,20,106	0/0:13,0:13:28.87:0,29,161	0/1:13,4:17:35.24:50,0,35	0/0:4,1:5:0:0,0,0	0/1:18,9:30:55.42:68,0,55	0/0:10,0:11:16.15:0,16,114	0/0:5,1:7:1.04:0,1,88	0/1:18,7:29:63.47:63,0,136	0/1:9,6:14:6.98:38,0,7	0/0:24,0:22:48.69:0,49,266	1/1:14,5:20:10.44:57,10,0	0/0:7,0:7:11.46:0,11,59
chr10	83951633	.	G	GCGGAGAGAA	5528.76	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-4.994;DP=568;FS=1.947;HRun=0;HaplotypeScore=156.3532;InbreedingCoeff=0.9732;MQ=81.71;MQ0=1;MQRankSum=-10.909;QD=82.52;ReadPosRankSum=-0.154;VQSLOD=5.0722;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.29:0,90,2538	1/1:0,2:2:6.02:281,6,0	0/0:13,0:13:27.05:0,27,594	0/0:25,0:25:51.10:0,51,1174	0/0:28,0:28:72.25:0,72,2068	0/0:14,0:14:33.10:0,33,815	0/0:37,0:37:99:0,102,2778	0/0:19,0:19:30.09:0,30,726	0/0:25,0:25:63.22:0,63,1744	1/1:7,8:15:33.11:1470,33,0	1/1:2,12:13:24.21:629,24,0	0/0:29,0:29:84.25:0,84,2358	0/0:23,0:23:59.98:0,60,1650	0/0:26,0:26:72.23:0,72,1958	0/0:21,0:21:48.16:0,48,1375	1/1:8,13:23:48.16:2098,48,0	1/1:5,8:13:24.55:1052,25,0	0/0:17,0:17:48.16:0,48,1289	0/0:10,0:10:24.07:0,24,577	0/0:12,0:12:33.11:0,33,931	0/0:39,0:39:99:0,108,2867	0/0:19,0:19:54.19:0,54,1505	0/0:12,0:12:33.10:0,33,854	0/0:26,0:25:72.21:0,72,1915	0/0:20,0:20:42.13:0,42,1153	0/0:22,0:22:48.16:0,48,1338	0/0:18,0:18:51.15:0,51,1373	0/0:12,0:12:36.12:0,36,1041
chr10	83955940	.	AAAG	A	3139.63	PASS	AB=0.536;AC=19;AF=0.339;AN=56;BaseQRankSum=11.217;DP=585;FS=6.664;HRun=0;HaplotypeScore=96.1427;InbreedingCoeff=0.9269;MQ=63.96;MQ0=5;MQRankSum=-0.325;QD=15.24;ReadPosRankSum=0.676;VQSLOD=2.8075;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:52.10:0,52,854	1/1:2,5:7:11.78:116,12,0	0/0:21,0:9:12.08:0,12,127	0/0:17,0:11:13.23:0,13,131	0/0:24,0:23:56.37:0,56,793	0/0:17,0:17:33.42:0,33,532	1/1:15,0:16:24.01:164,24,0	0/0:34,0:34:74.32:0,74,877	0/0:16,0:16:45:0,45,727	1/1:3,22:25:53.96:545,54,0	1/1:23,1:24:32.36:397,32,0	0/0:15,0:15:38.89:0,39,518	0/0:25,0:25:59.08:0,59,767	0/0:21,0:21:24.71:0,25,573	0/1:2,13:15:2.45:98,0,2	1/1:7,28:35:28.98:332,29,0	1/1:15,2:16:35.17:321,35,0	1/1:20,1:20:53.65:443,54,0	0/0:35,0:32:59.79:0,60,983	0/0:15,0:15:8.89:0,9,431	0/0:15,0:15:32.99:0,33,446	0/0:17,0:17:41.86:0,42,537	0/0:24,0:23:62.46:0,62,919	0/0:23,0:23:41.25:0,41,734	0/0:16,0:15:35.82:0,36,505	1/1:29,0:28:82.91:651,83,0	0/0:19,0:19:46.90:0,47,621	1/1:17,0:16:33:285,33,0
chr10	83955941	.	AAG	A	3486.07	PASS	AB=0.969;AC=20;AF=0.357;AN=56;BaseQRankSum=11.857;DP=577;FS=9.883;HRun=0;HaplotypeScore=85.3091;InbreedingCoeff=0.8475;MQ=64.92;MQ0=5;MQRankSum=-1.385;QD=15.63;ReadPosRankSum=0.086;VQSLOD=2.9919;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:40.68:0,41,681	1/1:6,1:7:12.44:107,12,0	0/0:21,0:10:9.80:0,10,116	0/1:16,0:11:13.22:13,0,110	0/0:23,0:22:51.10:0,51,639	0/0:16,0:16:11.08:0,11,417	1/1:17,0:17:42.23:337,42,0	0/0:34,0:34:76.31:0,76,761	0/0:16,0:16:44.98:0,45,577	1/1:25,0:24:53.27:425,53,0	1/1:24,0:24:30.82:373,31,0	0/0:15,0:15:37.74:0,38,402	0/0:25,0:25:57.84:0,58,632	0/0:20,0:20:40.57:0,41,489	0/1:14,1:15:3.53:88,0,4	1/1:35,0:35:30.70:229,31,0	1/1:17,0:16:33.65:233,34,0	1/1:20,1:20:55.15:400,55,0	0/0:34,0:31:74.97:0,75,812	0/0:15,0:15:9.14:0,9,360	0/0:13,0:13:32.98:0,33,374	0/0:16,0:16:41.21:0,41,448	0/0:24,0:23:62.25:0,62,712	0/0:23,0:23:51.81:0,52,590	0/0:15,0:14:35.66:0,36,404	1/1:3,26:28:83.98:868,84,0	0/0:19,0:19:39.82:0,40,475	1/1:1,16:16:33.10:412,33,0
chr10	83955942	.	AG	A	2707.93	PASS	AB=0.969;AC=22;AF=0.393;AN=56;BaseQRankSum=12.267;DP=566;FS=20.695;HRun=1;HaplotypeScore=75.2365;InbreedingCoeff=0.8345;MQ=64.80;MQ0=5;MQRankSum=-1.080;QD=11.93;ReadPosRankSum=-0.346;VQSLOD=0.6267;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:23.20:0,23,536	1/1:6,0:6:12.33:80,12,0	0/0:19,1:10:14.71:0,15,142	0/1:14,1:11:15.19:15,0,92	0/0:23,0:22:50.22:0,50,508	0/0:16,0:16:6.85:0,7,325	1/1:15,2:17:41.68:399,42,0	0/0:35,0:35:63.51:0,64,651	0/0:15,0:15:45.05:0,45,452	1/1:23,0:22:51.84:378,52,0	1/1:20,1:21:27.55:350,28,0	0/0:16,0:16:24.01:0,24,295	0/0:24,1:25:35.37:0,35,482	0/0:20,0:20:31.91:0,32,369	1/1:15,0:15:5.67:68,6,0	1/1:33,1:34:30.12:201,30,0	1/1:16,0:15:30.05:201,30,0	1/1:21,0:20:52.82:364,53,0	0/0:34,0:31:62.59:0,63,671	0/1:14,0:14:4.48:4,0,279	0/0:14,0:14:32.76:0,33,301	0/0:14,2:16:41.08:0,41,369	0/0:23,0:22:60.94:0,61,524	0/0:23,0:23:32.57:0,33,415	0/0:15,0:14:26.77:0,27,279	1/1:28,1:28:81.97:618,82,0	0/0:17,0:17:46.43:0,46,398	1/1:16,0:15:32.81:243,33,0
chr10	83956122	.	T	TAC	703.66	PASS	AB=0.975;AC=3;AF=0.054;AN=56;BaseQRankSum=-4.144;DP=697;FS=7.390;HRun=0;HaplotypeScore=99.5570;InbreedingCoeff=0.5957;MQ=65.49;MQ0=1;MQRankSum=1.238;QD=10.50;ReadPosRankSum=-0.860;VQSLOD=2.7276;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:38,1:39:19.37:19,0,835	0/0:11,0:11:21.06:0,21,254	0/0:25,0:23:41.96:0,42,487	0/0:36,0:33:49.64:0,50,557	0/0:19,0:19:42.13:0,42,509	0/0:15,0:15:33.06:0,33,366	1/1:6,22:28:18.26:787,18,0	0/0:27,0:27:54.02:0,54,592	0/0:23,0:23:60.14:0,60,700	0/0:23,0:23:54.08:0,54,619	0/0:13,0:13:36.09:0,36,415	0/0:27,0:27:69.20:0,69,825	0/0:18,0:20:56.84:0,57,644	0/0:33,0:33:90.28:0,90,1091	0/0:33,0:33:68.92:0,69,821	0/0:24,0:24:60.17:0,60,716	0/0:39,0:39:93.29:0,93,1127	0/0:14,0:15:42.10:0,42,494	0/0:20,0:20:36.11:0,36,436	0/0:16,0:16:42.13:0,42,509	0/0:67,0:66:99:0,128,1742	0/0:27,0:27:63.19:0,63,764	0/0:14,0:16:38.94:0,39,438	0/0:31,0:31:78.22:0,78,932	0/0:30,0:30:84.24:0,84,1007	0/0:22,0:22:45.12:0,45,526	0/0:15,0:15:27.07:0,27,315	0/0:2,0:2:6.02:0,6,73
chr10	83956244	.	ACG	A	2826.93	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=7.921;DP=653;FS=19.973;HRun=0;HaplotypeScore=125.0119;InbreedingCoeff=0.6150;MQ=60.54;MQ0=9;MQRankSum=0.573;QD=11.00;ReadPosRankSum=0.497;VQSLOD=1.9075;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:49.01:0,49,384	1/1:9,3:11:21:193,21,0	0/0:12,0:4:3.26:0,3,10	0/0:15,0:6:5.94:0,6,80	0/0:13,0:13:34.79:0,35,463	0/0:12,0:12:33.06:0,33,556	0/0:40,0:40:97.83:0,98,1002	0/1:23,0:23:99:156,0,133	0/0:26,0:26:75.20:0,75,1300	1/1:16,3:19:31.68:393,32,0	1/1:8,4:12:23.40:204,23,0	0/0:38,0:38:90.78:0,91,1623	0/0:26,0:26:72.06:0,72,1180	0/0:37,0:37:99:0,108,1945	1/1:39,0:36:9.45:275,9,0	1/1:15,13:28:72.14:646,72,0	1/1:24,7:30:54.62:529,55,0	0/1:15,0:14:18.43:93,0,18	0/1:10,0:10:18.52:82,0,19	0/0:22,0:22:17:0,17,113	0/1:49,0:48:54.64:55,0,200	0/0:16,0:16:34.69:0,35,595	0/0:16,0:16:42.08:0,42,678	0/0:52,0:50:99:0,138,2277	0/0:30,0:29:28.05:0,28,164	1/1:0,14:14:41.57:330,42,0	0/0:14,0:14:3.62:0,4,101	1/1:4,1:4:8.99:74,9,0
chr10	83956246	.	GCA	G	1025.26	PASS	AB=0.985;AC=18;AF=0.333;AN=54;BaseQRankSum=8.185;DP=669;FS=0.000;HRun=0;HaplotypeScore=135.3253;InbreedingCoeff=0.2710;MQ=57.86;MQ0=10;MQRankSum=-0.364;QD=3.34;ReadPosRankSum=0.331;VQSLOD=2.7074;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:22.72:94,0,23	1/1:13,0:12:8.38:40,8,0	0/0:11,0:3:0.89:0,1,2	0/0:13,0:4:6:0,6,69	0/0:14,0:14:32.87:0,33,420	0/0:12,0:12:32.31:0,32,428	0/1:39,0:39:38.09:38,0,366	1/1:10,14:24:26.75:422,27,0	0/0:27,0:27:71.75:0,72,1036	0/1:19,0:19:38.43:38,0,65	0/1:12,0:12:12.65:13,0,17	0/0:39,1:40:57.22:0,57,1209	0/0:26,0:26:64.04:0,64,931	0/0:39,0:39:99:0,108,1641	0/0:41,0:38:21.40:0,21,201	0/1:29,0:29:19.82:97,0,20	0/1:33,0:31:63.84:78,0,64	0/0:16,0:15:22.50:0,23,189	1/1:8,2:10:11.23:166,11,0	0/1:21,1:22:8.49:9,0,8	0/1:47,4:50:35.88:110,0,36	0/0:18,0:18:28.84:0,29,616	0/0:17,0:17:45:0,45,637	0/0:54,0:52:99:0,118,1779	0/0:28,1:28:14.17:0,14,50	1/1:14,0:14:3.48:17,3,0	1/1:14,0:14:12:76,12,0	./.
chr10	83956252	.	A	ACACACG	1008.86	PASS	AB=1.000;AC=10;AF=0.185;AN=54;BaseQRankSum=4.605;DP=705;FS=1.841;HRun=0;HaplotypeScore=191.9878;InbreedingCoeff=0.2693;MQ=56.12;MQ0=15;MQRankSum=0.523;QD=4.71;ReadPosRankSum=0.693;VQSLOD=2.8062;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:62.64:0,63,623	0/0:13,0:12:0.16:0,0,127	0/0:11,0:2:0.12:0,0,0	0/0:22,0:3:6:0,6,91	0/0:15,0:15:37.89:0,38,585	0/0:14,0:14:38.98:0,39,641	0/0:40,0:40:86.24:0,86,1104	0/1:27,0:26:0.14:191,0,0	0/0:28,0:28:78.10:0,78,1506	0/0:24,0:24:58.21:0,58,703	0/0:16,0:16:33.02:0,33,350	0/0:41,0:41:98.93:0,99,2045	0/0:29,0:29:77.79:0,78,1496	0/0:40,0:40:99:0,111,2248	0/1:39,0:36:99:110,0,159	0/0:29,0:29:63.11:0,63,855	0/0:38,0:36:80.53:0,81,912	0/1:16,0:15:46.49:87,0,46	0/1:15,0:15:13.43:85,0,13	0/1:21,0:21:37.55:38,0,51	0/1:53,0:52:78.32:78,0,201	0/0:21,0:21:39.15:0,39,922	0/0:17,0:17:45.14:0,45,853	0/0:50,0:48:99:0,123,2590	1/1:7,21:29:4.18:405,4,0	0/0:11,0:10:20.87:0,21,176	1/1:13,0:13:21.05:159,21,0	./.
chr10	83956256	.	A	ACG	1066.39	PASS	AB=0.629;AC=9;AF=0.161;AN=56;BaseQRankSum=3.534;DP=718;FS=1.849;HRun=0;HaplotypeScore=144.5771;InbreedingCoeff=0.5590;MQ=55.75;MQ0=17;MQRankSum=-1.094;QD=6.66;ReadPosRankSum=0.359;VQSLOD=3.4246;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:71.76:0,72,592	0/0:10,0:12:16.60:0,17,116	0/0:16,0:3:0.47:0,0,1	0/0:25,0:3:6:0,6,69	0/0:14,0:14:39.07:0,39,494	0/0:15,0:15:42.04:0,42,524	0/0:39,0:39:96.13:0,96,958	1/1:24,0:23:18.45:217,18,0	0/0:27,0:27:71.97:0,72,1031	0/0:24,0:26:74.68:0,75,660	0/0:14,0:15:38.79:0,39,322	0/0:38,0:38:99:0,102,1429	0/0:29,0:29:83.93:0,84,1099	0/0:39,0:39:99:0,114,1601	0/0:44,0:41:42.06:0,42,388	0/0:23,0:28:71.51:0,72,567	0/0:39,0:37:88.40:0,88,712	0/0:16,0:15:10.31:0,10,122	0/1:8,6:14:44.32:98,0,44	0/1:5,16:22:6.11:104,0,6	0/1:22,32:54:71.67:247,0,72	0/0:21,0:21:39.13:0,39,682	0/0:17,0:17:48.13:0,48,671	0/0:49,0:47:99:0,123,1808	1/1:27,1:27:21.12:168,21,0	0/0:12,0:11:23.73:0,24,172	1/1:2,13:16:21.96:388,22,0	0/0:4,0:3:2.99:0,3,23
chr10	83956258	.	ACG	A	5136.67	PASS	AB=0.990;AC=29;AF=0.518;AN=56;BaseQRankSum=4.057;DP=723;FS=8.335;HRun=0;HaplotypeScore=127.6479;InbreedingCoeff=0.5069;MQ=55.52;MQ0=18;MQRankSum=-0.763;QD=11.00;ReadPosRankSum=-4.527;VQSLOD=3.1728;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:29,3:32:71.74:663,72,0	1/1:14,0:13:20.95:176,21,0	0/0:17,0:3:0.89:0,1,2	0/0:27,0:3:2.94:0,3,18	0/0:14,0:14:24.88:0,25,424	0/0:16,0:16:28.23:0,28,391	0/1:37,3:40:61.76:568,0,62	1/1:26,0:25:46.66:411,47,0	0/0:27,0:27:60.93:0,61,926	1/1:24,2:26:56.67:592,57,0	1/1:13,2:15:37.58:300,38,0	0/1:38,0:38:3.27:3,0,1130	0/0:29,0:29:57.35:0,57,926	0/0:39,0:39:99:0,101,1619	1/1:44,0:41:10.11:329,10,0	1/1:20,8:28:69.13:619,69,0	1/1:32,7:37:75.58:713,76,0	0/1:16,0:15:16.95:95,0,17	0/1:13,0:13:10.51:108,0,11	0/1:22,0:22:23.23:61,0,23	1/1:55,0:53:8.18:178,8,0	0/0:21,0:21:40.20:0,40,679	0/0:17,0:17:37.94:0,38,618	0/0:49,0:47:39.54:0,40,1699	0/1:28,0:27:2.79:3,0,47	1/1:11,0:10:29.87:235,30,0	0/1:16,0:16:0.69:35,0,1	1/1:4,0:3:5.99:48,6,0
chr10	83956260	.	GCA	G	464.38	PASS	AB=0.969;AC=12;AF=0.231;AN=52;BaseQRankSum=6.814;DP=736;FS=1.093;HRun=0;HaplotypeScore=146.0050;InbreedingCoeff=0.0236;MQ=55.37;MQ0=19;MQRankSum=0.069;QD=1.57;ReadPosRankSum=2.798;VQSLOD=2.2245;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:21.09:96,0,21	1/1:14,0:13:5.01:24,5,0	./.	./.	0/0:14,0:14:30.10:0,30,454	0/0:15,0:16:12.97:0,13,340	0/1:40,0:40:35.08:35,0,351	0/0:27,0:26:10.30:0,10,74	0/0:23,2:26:5.39:0,5,659	0/1:25,0:25:42.27:42,0,61	0/1:15,0:15:7.72:16,0,8	0/1:29,7:38:99:129,0,946	0/0:29,1:30:20.13:0,20,828	0/0:36,1:38:52.63:0,53,1200	0/0:44,0:41:20.96:0,21,209	0/1:31,0:31:40.64:98,0,41	0/1:40,0:38:63.33:75,0,63	0/0:15,0:14:20.16:0,20,172	0/0:13,0:13:10.85:0,11,85	0/0:24,0:24:13.34:0,13,131	0/0:56,0:54:32.42:0,32,259	0/0:20,1:22:22.52:0,23,678	0/0:17,2:19:1.93:0,2,452	0/1:44,4:46:77.53:78,0,1224	0/0:28,0:27:22.25:0,22,141	1/1:11,0:10:2.06:12,2,0	0/0:16,0:17:19.50:0,19,147	0/0:5,0:4:0:0,0,0
chr10	83958193	.	T	TA	237.53	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.963;DP=514;FS=1.112;HRun=9;HaplotypeScore=50.6439;InbreedingCoeff=0.8832;MQ=66.34;MQ0=0;MQRankSum=-0.041;QD=15.84;ReadPosRankSum=-0.222;VQSLOD=3.4229;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,908	0/0:8,0:8:23.97:0,24,203	0/0:15,0:13:28.18:0,28,213	0/0:11,0:10:23.56:0,24,176	0/0:24,0:24:68.99:0,69,599	0/0:18,1:19:17.81:0,18,383	1/1:4,11:15:30.08:332,30,0	0/0:39,0:39:78.09:0,78,794	0/0:11,0:11:29.99:0,30,260	0/0:27,0:27:71.97:0,72,623	0/0:18,0:19:56.02:0,56,472	0/0:22,0:22:50.96:0,51,443	0/0:10,0:10:29.99:0,30,260	0/0:14,0:14:35.97:0,36,308	0/0:17,0:17:12.97:0,13,286	0/0:15,0:15:32.96:0,33,280	0/0:30,0:30:74.95:0,75,647	0/0:29,0:29:80.96:0,81,697	0/0:16,0:16:35.96:0,36,307	0/0:22,0:22:59.98:0,60,519	0/0:12,0:12:35.96:0,36,304	0/0:5,0:5:15:0,15,130	0/0:5,0:5:15:0,15,130	0/0:12,0:12:32.98:0,33,283	0/0:28,0:28:77.95:0,78,671	0/0:30,0:30:83.90:0,84,714	0/0:17,0:17:41.98:0,42,362	0/0:4,0:4:8.99:0,9,78
chr10	83959362	.	AT	A	879.10	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.242;DP=869;FS=11.775;HRun=2;HaplotypeScore=106.4415;InbreedingCoeff=0.9985;MQ=78.24;MQ0=0;MQRankSum=-2.294;QD=29.30;ReadPosRankSum=-0.027;VQSLOD=2.0304;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,184,2663	0/0:15,0:15:45.15:0,45,674	0/0:22,0:22:63.15:0,63,859	0/0:23,0:23:53.32:0,53,711	0/0:17,0:17:51.15:0,51,740	0/0:26,0:26:75.24:0,75,1103	1/1:0,30:30:75.24:974,75,0	0/0:31,0:31:90.30:0,90,1331	0/0:44,0:44:99:0,123,1781	0/0:33,0:33:99:0,99,1466	0/0:11,0:11:30.10:0,30,450	0/0:45,0:45:99:0,129,1931	0/0:38,0:38:99:0,111,1661	0/0:40,0:40:99:0,117,1709	0/0:41,0:41:99:0,123,1842	0/0:29,0:29:87.25:0,87,1261	0/0:37,0:37:99:0,105,1551	0/0:25,0:25:69.23:0,69,1031	0/0:18,0:18:51.17:0,51,759	0/0:21,0:21:63.19:0,63,905	0/0:81,0:81:99:0,241,3572	0/0:22,0:22:63.20:0,63,908	0/0:20,0:20:60.20:0,60,898	0/0:30,0:30:90.30:0,90,1347	0/0:32,0:32:93.29:0,93,1370	0/0:36,0:36:99:0,108,1583	0/0:31,0:31:90.30:0,90,1328	0/0:9,0:9:27.09:0,27,405
chr10	83960009	.	TGAATGAAA	T	9107.77	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=15.846;DP=805;FS=8.377;HRun=0;HaplotypeScore=202.2975;InbreedingCoeff=0.9496;MQ=82.21;MQ0=0;MQRankSum=-15.953;QD=66.97;ReadPosRankSum=3.589;VQSLOD=4.1575;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,135,5838	1/1:0,11:11:30.10:859,30,0	0/0:26,0:26:69.24:0,69,2682	0/0:24,0:24:63.19:0,63,2394	0/0:34,0:34:99:0,99,4299	0/0:22,0:22:63.22:0,63,2816	0/0:39,0:39:99:0,114,4887	0/0:35,0:35:99:0,105,4083	0/0:29,0:29:81.26:0,81,3376	1/1:1,38:39:99:2752,102,0	1/1:1,19:20:45.15:1287,45,0	0/0:25,0:25:72.23:0,72,2911	0/0:33,0:33:99:0,99,4363	0/0:37,0:37:99:0,111,4685	0/0:34,0:34:99:0,99,4197	1/1:0,44:44:99:3093,108,0	1/1:3,18:21:39.13:1117,39,0	0/0:15,0:15:42.14:0,42,1683	0/0:17,0:17:48.16:0,48,2131	0/0:25,0:25:72.22:0,72,2790	0/0:40,0:40:99:0,120,5218	0/0:30,0:30:84.29:0,84,3618	0/0:21,0:21:63.22:0,63,2733	0/0:39,0:39:99:0,111,4667	0/0:22,0:22:66.23:0,66,2843	0/0:29,1:30:1.31:0,1,3620	0/0:32,0:32:93.32:0,93,4059	0/0:11,0:11:30.08:0,30,1204
chr10	83962798	.	CT	C	953.59	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.425;DP=698;FS=3.858;HRun=1;HaplotypeScore=63.5296;InbreedingCoeff=0.9997;MQ=78.71;MQ0=0;MQRankSum=-2.690;QD=32.88;ReadPosRankSum=-0.573;VQSLOD=3.0964;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1718	0/0:13,0:13:39.12:0,39,594	0/0:20,0:20:60.20:0,60,943	0/0:13,0:13:36.12:0,36,531	0/0:33,0:33:99:0,99,1513	0/0:21,0:21:63.20:0,63,982	1/1:0,29:29:75.25:1048,75,0	0/0:34,0:34:99:0,102,1545	0/0:25,0:25:75.26:0,75,1197	0/0:17,0:17:51.17:0,51,815	0/0:26,0:26:78.27:0,78,1247	0/0:30,0:30:90.29:0,90,1416	0/0:32,0:32:96.31:0,96,1501	0/0:34,0:34:99:0,99,1508	0/0:40,0:40:99:0,120,1916	0/0:27,0:27:81.26:0,81,1272	0/0:25,0:25:75.26:0,75,1197	0/0:12,0:12:36.12:0,36,575	0/0:21,0:21:63.21:0,63,986	0/0:20,0:20:60.19:0,60,936	0/0:21,0:21:63.21:0,63,997	0/0:26,0:26:78.26:0,78,1225	0/0:17,0:17:48.16:0,48,767	0/0:26,0:26:78.16:0,78,1165	0/0:17,0:17:51.15:0,51,772	0/0:30,0:30:90.31:0,90,1440	0/0:37,0:37:99:0,108,1723	0/0:16,0:16:48.16:0,48,767
chr10	83963582	.	GA	G	1621.89	PASS	AB=0.933;AC=9;AF=0.161;AN=56;BaseQRankSum=9.538;DP=623;FS=0.976;HRun=9;HaplotypeScore=60.5729;InbreedingCoeff=0.8659;MQ=67.41;MQ0=0;MQRankSum=-1.546;QD=17.07;ReadPosRankSum=0.793;VQSLOD=3.7290;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.18:0,63,718	0/0:7,0:7:21.06:0,21,242	0/0:24,0:24:45.14:0,45,560	0/1:13,1:11:15.83:16,0,107	0/0:32,0:32:90.26:0,90,1030	0/0:21,0:21:51.15:0,51,589	0/0:13,0:13:36.09:0,36,405	0/0:32,1:33:62.76:0,63,942	0/0:16,0:16:42.12:0,42,485	0/0:25,0:25:69.18:0,69,771	0/0:20,0:20:57.17:0,57,658	0/0:15,0:15:45.11:0,45,507	0/0:30,0:30:81.14:0,81,907	0/0:18,0:18:51.15:0,51,589	1/1:4,19:23:57.02:522,57,0	0/0:41,0:41:99:0,117,1327	0/0:20,0:20:54.14:0,54,612	1/1:2,18:20:16.41:405,16,0	0/0:15,0:15:42.09:0,42,462	0/0:32,0:32:93.26:0,93,1063	0/0:24,0:24:63.15:0,63,713	0/0:27,0:27:72.20:0,72,819	0/0:30,0:30:75.14:0,75,848	0/0:16,0:16:48.13:0,48,545	0/0:18,0:18:54.15:0,54,615	1/1:2,24:27:42.43:624,42,0	0/0:27,0:25:72.20:0,72,819	1/1:2,9:11:24.01:220,24,0
chr10	83963878	.	AAGG	A	9123.49	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=16.110;DP=760;FS=0.000;HRun=0;HaplotypeScore=108.8416;InbreedingCoeff=0.9998;MQ=89.67;MQ0=0;MQRankSum=-7.710;QD=43.45;ReadPosRankSum=1.553;VQSLOD=6.3593;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:67,0:67:99:0,199,4414	1/1:2,12:14:36.12:586,36,0	0/0:36,0:36:99:0,105,2259	0/0:25,0:26:63.16:0,63,1262	0/0:26,0:26:75.26:0,75,1656	0/0:19,0:19:57.20:0,57,1274	1/1:0,23:23:57.19:930,57,0	0/0:38,0:38:99:0,111,2376	0/0:18,0:18:51.18:0,51,1139	1/1:1,18:19:54.17:854,54,0	1/1:1,12:13:36.12:587,36,0	0/0:44,0:44:99:0,126,2754	0/0:33,0:33:99:0,99,2158	0/0:23,0:23:69.24:0,69,1534	1/1:0,39:39:99:1861,114,0	1/1:1,26:27:72.25:1176,72,0	1/1:2,24:26:54.18:882,54,0	1/1:0,16:16:42.14:686,42,0	0/0:23,0:23:57.18:0,57,1192	0/0:28,0:28:81.27:0,81,1748	0/0:35,0:35:96.33:0,96,2145	0/0:28,0:28:63.22:0,63,1360	0/0:26,0:26:75.24:0,75,1611	0/0:26,0:26:75.26:0,75,1655	0/0:16,0:16:48.16:0,48,1072	1/1:0,24:24:72.22:1122,72,0	0/0:38,0:38:99:0,111,2433	1/1:0,9:9:27.09:440,27,0
chr10	83964722	.	C	CT	9038.53	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-17.463;DP=775;FS=1.677;HRun=2;HaplotypeScore=73.0603;InbreedingCoeff=0.9999;MQ=85.25;MQ0=0;MQRankSum=-3.346;QD=42.24;ReadPosRankSum=4.591;VQSLOD=4.5439;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,1673	1/1:0,16:16:45.15:674,45,0	0/0:36,0:35:93.29:0,93,1180	0/0:24,0:24:69:0,69,832	0/0:18,0:18:54.18:0,54,701	0/0:18,0:18:54.18:0,54,701	0/0:22,0:22:63.20:0,63,818	0/0:34,0:34:96.31:0,96,1246	0/0:36,0:36:99:0,102,1320	1/1:1,24:25:75.21:1081,75,0	1/1:0,16:16:42.14:629,42,0	0/0:38,0:38:99:0,111,1440	0/0:30,0:30:90.29:0,90,1168	0/0:29,0:29:87.27:0,87,1115	1/1:1,33:34:93.32:1394,93,0	1/1:2,37:39:99:1574,105,0	1/1:0,26:26:78.26:1169,78,0	1/1:0,24:24:66.22:989,66,0	0/0:29,0:29:81.26:0,81,1051	0/0:24,0:24:72.23:0,72,935	0/0:39,0:39:99:0,117,1504	0/0:27,0:27:81.26:0,81,1051	0/0:26,0:26:75.24:0,75,974	0/0:28,0:28:84.27:0,84,1091	0/0:23,0:23:69.22:0,69,896	1/1:0,24:24:72.24:1077,72,0	0/0:36,0:36:99:0,105,1361	1/1:0,10:10:30.10:450,30,0
chr10	83965101	.	AC	A	5079.43	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=12.332;DP=605;FS=0.334;HRun=8;HaplotypeScore=80.6772;InbreedingCoeff=0.9748;MQ=71.34;MQ0=0;MQRankSum=-4.351;QD=24.07;ReadPosRankSum=2.784;VQSLOD=5.5104;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:30:69.10:665,69,0	1/1:0,15:15:45.07:434,45,0	0/0:17,1:17:33.33:0,33,332	0/0:13,0:13:3.11:0,3,152	0/0:24,0:24:63.15:0,63,717	0/0:26,0:26:63.15:0,63,716	1/1:3,12:15:36.05:348,36,0	0/0:31,0:31:69.67:0,70,821	0/0:13,0:13:39.12:0,39,471	1/1:3,20:23:66.10:635,66,0	1/1:7,16:23:54.07:514,54,0	0/0:20,0:20:54.15:0,54,631	0/0:19,0:19:57.17:0,57,688	0/0:28,0:28:75.20:0,75,883	1/1:5,19:24:54.08:521,54,0	1/1:7,21:28:38.87:653,39,0	1/1:3,12:16:38.08:354,38,0	1/1:0,12:12:36.06:348,36,0	0/0:20,0:20:45.14:0,45,543	0/0:25,0:25:63.10:0,63,688	0/0:25,0:25:66.18:0,66,775	0/0:22,0:22:63.62:0,64,727	0/0:30,0:31:84.16:0,84,956	0/0:19,0:19:54.15:0,54,641	0/0:28,0:28:84.23:0,84,975	1/1:3,14:17:42.06:405,42,0	0/0:31,0:31:90.26:0,90,1066	1/1:1,7:8:21.03:203,21,0
chr10	83965124	.	TG	T	3803.29	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.224;DP=606;FS=2.249;HRun=2;HaplotypeScore=89.1899;InbreedingCoeff=0.9885;MQ=69.74;MQ0=0;MQRankSum=-8.823;QD=32.51;ReadPosRankSum=-1.184;VQSLOD=3.1255;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.11:0,66,915	1/1:4,11:15:42.09:485,42,0	0/0:17,0:15:19.31:0,19,293	0/0:12,0:12:10.49:0,10,206	0/0:26,0:26:75.24:0,75,1093	0/0:19,0:19:54.17:0,54,784	0/0:19,0:19:54.16:0,54,767	0/0:26,0:26:75.14:0,75,981	0/0:14,0:14:39.13:0,39,582	1/1:6,26:32:81.22:1052,81,0	1/1:4,23:27:72.15:872,72,0	0/0:18,0:18:51.14:0,51,721	0/0:16,0:16:48.14:0,48,671	0/0:26,0:26:78.18:0,78,1080	0/0:19,0:19:51.12:0,51,682	1/1:4,23:27:48.23:831,48,0	1/1:2,14:16:48.04:563,48,0	0/0:18,0:18:54.14:0,54,781	0/0:22,0:22:66.16:0,66,872	0/0:28,0:28:84.24:0,84,1192	0/0:26,0:26:75.16:0,75,1003	0/0:16,0:16:46.96:0,47,656	0/0:32,0:32:96.16:0,96,1280	0/0:16,0:16:48.14:0,48,694	0/0:31,0:31:93.31:0,93,1381	0/0:16,0:16:48.15:0,48,694	0/0:36,0:36:99:0,108,1529	0/0:10,0:10:30.10:0,30,446
chr10	83967561	.	CAATAA	C	1196.47	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.147;DP=721;FS=7.108;HRun=0;HaplotypeScore=127.9685;InbreedingCoeff=0.9914;MQ=81.38;MQ0=0;MQRankSum=-4.780;QD=41.26;ReadPosRankSum=0.598;VQSLOD=3.4785;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:29:66.05:1291,66,0	0/0:6,0:6:18.06:0,18,517	0/0:24,0:24:72.24:0,72,1969	0/0:14,0:14:29.65:0,30,882	0/0:29,0:29:81.28:0,81,2446	0/0:21,0:21:63.22:0,63,1932	0/0:25,0:25:75.25:0,75,2242	0/0:33,0:33:90.31:0,90,2732	0/0:33,0:33:93.32:0,93,2822	0/0:32,0:32:90.31:0,90,2714	0/0:21,0:21:63.21:0,63,1873	0/0:28,0:28:78.25:0,78,2351	0/0:31,0:31:90.31:0,90,2788	0/0:35,0:35:99:0,102,3141	0/0:21,0:21:63.22:0,63,1914	0/0:23,0:23:66.22:0,66,1916	0/0:32,0:32:87.26:0,87,2390	0/0:21,0:21:57.14:0,57,1601	0/0:14,0:14:36.12:0,36,1092	0/0:37,0:37:96.33:0,96,2911	0/0:33,0:33:96.33:0,96,2881	0/0:22,0:22:60.20:0,60,1792	0/0:24,0:24:66.23:0,66,2012	0/0:24,0:24:72.25:0,72,2232	0/0:26,0:26:69.24:0,69,2139	0/0:33,0:33:84.29:0,84,2537	0/0:36,0:36:99:0,108,3339	0/0:14,0:14:42.14:0,42,1233
chr10	83969730	.	A	AAAAT	633.86	PASS	AB=0.846;AC=5;AF=0.119;AN=42;BaseQRankSum=-5.259;DP=290;FS=17.064;HRun=0;HaplotypeScore=46.5045;InbreedingCoeff=0.4692;MQ=78.24;MQ0=3;MQRankSum=1.283;QD=12.94;ReadPosRankSum=-0.423;VQSLOD=1.2148;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:21.03:0,21,273	0/0:1,0:3:3:0,3,28	./.	./.	0/0:15,0:15:15.05:0,15,231	0/0:12,0:12:33.11:0,33,506	./.	0/0:28,0:26:14.85:0,15,105	0/0:5,0:5:3.01:0,3,46	0/0:9,0:10:3:0,3,28	0/0:12,0:12:3:0,3,28	0/0:6,0:6:9.03:0,9,138	./.	./.	0/0:6,0:10:6.01:0,6,56	0/0:9,0:9:9.02:0,9,120	0/0:13,0:23:24.01:0,24,219	0/0:12,0:18:12:0,12,108	./.	0/0:7,0:7:3.01:0,3,46	0/0:6,0:6:9.03:0,9,138	./.	0/0:6,0:6:6.02:0,6,92	0/0:2,0:2:3.01:0,3,46	0/1:9,2:9:0:0,0,0	1/1:10,5:15:15.05:321,15,0	0/0:8,0:8:6.02:0,6,92	1/1:9,9:23:18.06:421,18,0
chr10	83970444	.	GT	G	2884.40	PASS	AB=0.549;AC=7;AF=0.125;AN=56;BaseQRankSum=9.301;DP=628;FS=9.513;HRun=1;HaplotypeScore=60.9401;InbreedingCoeff=0.9187;MQ=72.08;MQ0=0;MQRankSum=-1.907;QD=33.93;ReadPosRankSum=1.285;VQSLOD=2.6186;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.09:0,54,781	0/0:13,0:13:39.07:0,39,567	0/0:24,0:23:49.72:0,50,758	0/0:11,0:10:21:0,21,291	0/0:30,0:30:90.28:0,90,1387	0/0:29,0:29:84.27:0,84,1304	0/0:18,0:18:54.12:0,54,765	0/0:27,0:27:81.26:0,81,1243	0/0:22,0:22:66.18:0,66,981	0/0:19,0:19:54.16:0,54,802	0/0:28,0:28:84.27:0,84,1318	0/0:28,0:28:84.22:0,84,1220	0/0:24,0:24:69.20:0,69,1055	0/0:25,0:25:75.21:0,75,1115	1/1:0,26:26:72.24:1006,72,0	0/0:21,0:21:63.20:0,63,983	0/0:19,0:19:57.16:0,57,861	1/1:0,17:17:45.15:629,45,0	0/0:21,0:21:63.21:0,63,1000	0/0:25,0:25:75.23:0,75,1171	0/0:11,0:11:33.11:0,33,526	0/0:28,0:28:84.27:0,84,1316	0/0:20,0:20:60.19:0,60,929	0/0:23,0:23:66.16:0,66,1000	0/0:25,0:25:75.24:0,75,1167	0/1:5,23:28:0.32:938,0,0	0/0:32,0:32:93.30:0,93,1458	1/1:0,14:14:33.11:461,33,0
chr10	83970685	.	C	CA	2093.89	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-1.577;DP=612;FS=8.703;HRun=7;HaplotypeScore=61.9130;InbreedingCoeff=0.9991;MQ=76.18;MQ0=0;MQRankSum=-0.698;QD=30.35;ReadPosRankSum=3.446;VQSLOD=3.8120;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.11:0,84,806	0/0:10,0:10:27.04:0,27,261	0/0:15,0:16:36.46:0,36,327	0/0:15,0:15:39.01:0,39,347	0/0:24,0:24:63.10:0,63,608	0/0:28,0:28:81.10:0,81,770	0/0:18,0:18:48.06:0,48,457	0/0:23,0:23:60.09:0,60,579	0/0:32,0:32:81.11:0,81,777	0/0:25,0:25:63.10:0,63,608	0/0:13,0:13:39.06:0,39,377	0/0:21,0:21:60.09:0,60,579	0/0:26,0:26:66.08:0,66,631	0/0:29,0:29:75.09:0,75,719	1/1:1,22:23:66.20:797,66,0	0/0:30,0:30:84.12:0,84,806	0/0:24,0:24:69.08:0,69,659	1/1:0,13:13:39.12:471,39,0	0/0:15,0:15:42.06:0,42,405	0/0:15,0:15:42.07:0,42,406	0/0:25,0:24:75.09:0,75,708	0/0:19,0:19:51.07:0,51,487	0/0:17,0:17:39.06:0,39,377	0/0:25,0:25:63.09:0,63,608	0/0:20,0:20:57.08:0,57,545	1/1:5,17:22:25.18:587,25,0	0/0:41,0:39:99:0,117,1124	1/1:0,11:11:33.10:399,33,0
chr10	83971016	.	A	AC	8836.53	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.112;DP=342;FS=3.135;HRun=1;HaplotypeScore=70.3640;InbreedingCoeff=0.7183;MQ=37.77;MQ0=67;MQRankSum=-1.874;QD=26.54;ReadPosRankSum=2.379;VQSLOD=4.8820;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,8:11:24.04:329,24,0	1/1:1,4:5:15.01:196,15,0	0/0:2,0:1:3.01:0,3,36	0/0:5,2:4:2.84:0,3,14	1/1:2,15:15:30.10:437,30,0	1/1:4,13:13:33.11:483,33,0	1/1:6,7:10:18.02:242,18,0	1/1:8,9:11:30.04:400,30,0	1/1:4,5:7:15.05:221,15,0	1/1:4,6:8:18.06:264,18,0	1/1:4,9:10:27.09:392,27,0	1/1:1,15:15:35.96:532,36,0	1/1:4,12:12:30.10:442,30,0	1/1:1,7:6:15.05:207,15,0	1/1:2,10:10:30.10:441,30,0	1/1:2,6:8:20.98:261,21,0	1/1:8,6:7:18.06:258,18,0	1/1:4,6:6:15.01:196,15,0	1/1:4,6:8:18.06:267,18,0	1/1:4,8:8:21.07:308,21,0	1/1:5,16:18:27.03:395,27,0	1/1:3,7:7:15.05:222,15,0	1/1:0,8:8:21.07:311,21,0	1/1:8,11:13:33.07:460,33,0	1/1:4,8:9:24.08:351,24,0	1/1:4,12:13:39.07:526,39,0	1/1:6,10:12:30.10:434,30,0	1/1:3,7:7:18.06:260,18,0
chr10	83971175	.	A	AT	555.18	PASS	AB=1.000;AC=31;AF=0.912;AN=34;BaseQRankSum=-2.639;DP=211;FS=35.628;HRun=0;HaplotypeScore=15.8246;InbreedingCoeff=0.0496;MQ=40.80;MQ0=173;MQRankSum=-2.506;QD=4.27;ReadPosRankSum=-0.367;VQSLOD=1.1404;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,0:1:3.01:32,3,0	0/0:6,0:2:2.92:0,3,18	0/1:8,0:4:11.23:11,0,22	1/1:15,0:4:8.94:56,9,0	1/1:10,0:4:8.92:82,9,0	./.	./.	1/1:7,0:1:3.01:35,3,0	1/1:7,0:2:4.46:20,4,0	./.	1/1:10,1:1:3:25,3,0	1/1:3,1:1:3:26,3,0	./.	./.	1/1:5,0:1:3.01:37,3,0	1/1:15,0:1:3.01:39,3,0	1/1:7,0:1:1.82:5,2,0	./.	1/1:5,1:1:3.01:35,3,0	./.	1/1:3,1:1:3.01:33,3,0	./.	./.	1/1:4,0:2:3.01:43,3,0	./.	1/1:9,1:6:15.79:154,16,0	1/1:15,0:2:2.80:13,3,0
chr10	83972868	.	ACTT	A	772.60	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.022;DP=651;FS=15.304;HRun=0;HaplotypeScore=89.0077;InbreedingCoeff=0.9991;MQ=92.29;MQ0=0;MQRankSum=-3.782;QD=35.12;ReadPosRankSum=1.684;VQSLOD=3.4318;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:54.18:867,54,0	0/0:11,0:11:30.10:0,30,657	0/0:24,0:24:71.99:0,72,1424	0/0:32,0:32:81.28:0,81,1722	0/0:24,0:24:69.24:0,69,1524	0/0:23,0:23:66.23:0,66,1452	0/0:17,0:17:51.18:0,51,1122	0/0:39,0:39:99:0,111,2443	0/0:26,0:26:75.26:0,75,1635	0/0:28,0:28:78.27:0,78,1709	0/0:21,0:21:54.19:0,54,1192	0/0:18,0:18:42.14:0,42,925	0/0:25,0:25:69.24:0,69,1521	0/0:35,0:35:99:0,99,2146	0/0:30,0:30:81.26:0,81,1747	0/0:29,0:29:78.26:0,78,1683	0/0:31,0:31:87.28:0,87,1866	0/0:25,0:25:72.25:0,72,1587	0/0:17,0:17:39.13:0,39,860	0/0:20,0:20:60.20:0,60,1286	0/0:16,0:16:48.15:0,48,995	0/0:21,0:21:60.21:0,60,1325	0/0:20,0:20:60.20:0,60,1281	0/0:14,0:14:42.14:0,42,918	0/0:20,0:20:57.20:0,57,1259	0/0:22,0:22:66.23:0,66,1458	0/0:30,0:30:84.29:0,84,1853	0/0:11,0:11:33.11:0,33,729
chr10	83973454	.	CT	C	6338.44	PASS	AC=52;AF=1.000;AN=52;DP=228;FS=0.000;HRun=3;HaplotypeScore=93.8062;InbreedingCoeff=-0.0344;MQ=37.10;MQ0=0;QD=28.30;VQSLOD=3.9270;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,12:12:24.08:296,24,0	1/1:0,7:7:21.01:241,21,0	./.	./.	1/1:0,6:6:9.03:111,9,0	1/1:2,3:5:6.02:74,6,0	1/1:1,14:15:39.12:481,39,0	1/1:2,12:14:36.11:445,36,0	1/1:0,9:9:23.99:262,24,0	1/1:0,14:14:42.12:510,42,0	1/1:0,2:2:2.60:37,3,0	1/1:0,13:13:39.08:464,39,0	1/1:1,3:4:8.99:95,9,0	1/1:0,8:8:18.06:222,18,0	1/1:2,15:17:51.08:595,51,0	1/1:0,5:5:12.04:148,12,0	1/1:3,11:13:21.07:259,21,0	1/1:0,7:7:15.05:185,15,0	1/1:1,12:13:30.09:371,30,0	1/1:1,7:8:15.03:173,15,0	1/1:0,2:2:6.02:74,6,0	1/1:0,8:8:21.07:259,21,0	1/1:3,1:4:3.01:37,3,0	1/1:1,13:14:15.05:185,15,0	1/1:0,6:6:18.06:222,18,0	1/1:0,6:6:18.06:222,18,0	1/1:0,8:8:24.08:296,24,0	1/1:0,2:2:6.02:74,6,0
chr10	83974483	.	C	CA	256.49	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.429;DP=444;FS=13.471;HRun=8;HaplotypeScore=181.5401;InbreedingCoeff=0.7922;MQ=78.49;MQ0=0;MQRankSum=-5.641;QD=17.10;ReadPosRankSum=-0.605;VQSLOD=1.7730;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,12:15:33.01:351,33,0	0/0:8,0:8:24.01:0,24,220	0/0:17,0:17:30:0,30,274	0/0:11,0:11:27.01:0,27,247	0/0:18,0:18:54.01:0,54,487	0/0:13,0:13:23.99:0,24,220	0/0:14,0:14:35.99:0,36,324	0/0:26,0:26:52.49:0,52,531	0/0:16,0:16:39:0,39,357	0/0:22,0:22:60.03:0,60,549	0/0:9,0:9:21:0,21,192	0/0:31,0:31:68.98:0,69,623	0/0:19,0:19:54.02:0,54,494	0/0:14,0:14:39.01:0,39,357	0/0:12,0:12:36.02:0,36,329	0/0:20,0:20:48.01:0,48,439	0/0:12,0:12:35.97:0,36,321	0/0:18,0:18:50.93:0,51,450	0/0:2,0:2:5.96:0,6,47	0/0:19,1:20:4.41:0,4,294	0/0:16,0:16:36.01:0,36,329	0/0:22,0:22:47.99:0,48,439	0/0:11,0:11:27.01:0,27,247	0/0:9,0:9:24.01:0,24,220	0/0:17,0:17:42.02:0,42,384	0/0:14,0:14:42.02:0,42,384	0/0:22,0:22:60.03:0,60,546	0/0:16,0:16:36:0,36,328
chr10	83974518	.	A	AAC	2835.34	PASS	AB=0.737;AC=7;AF=0.125;AN=56;BaseQRankSum=-4.940;DP=529;FS=4.411;HRun=0;HaplotypeScore=191.8026;InbreedingCoeff=0.4817;MQ=55.12;MQ0=3;MQRankSum=-5.464;QD=24.87;ReadPosRankSum=-5.234;VQSLOD=2.3206;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:44.73:0,45,508	0/0:9,0:9:24.07:0,24,295	0/0:18,0:8:6.80:0,7,91	0/0:10,0:5:9.02:0,9,100	0/0:34,0:35:87.22:0,87,1041	0/0:11,0:11:33.02:0,33,360	0/0:16,0:16:36.11:0,36,443	1/1:17,17:34:74.95:1059,75,0	0/0:17,0:18:38.94:0,39,444	0/0:25,0:25:48.15:0,48,591	0/0:7,0:8:21.07:0,21,259	0/0:27,0:27:63.11:0,63,721	0/0:19,0:19:47.97:0,48,554	0/0:17,0:19:50.94:0,51,564	0/0:18,0:18:51.13:0,51,603	0/0:13,0:14:26.86:0,27,279	0/0:22,0:22:51.16:0,51,624	0/0:22,0:22:57.14:0,57,673	0/1:6,3:10:21.88:157,0,22	0/1:11,11:23:22.64:651,0,23	0/1:17,4:20:40.80:329,0,41	0/0:20,0:20:45.10:0,45,525	0/0:15,0:15:33.02:0,33,360	0/0:14,0:14:36.08:0,36,427	0/0:15,0:15:36.11:0,36,443	0/0:18,0:18:39.10:0,39,458	1/1:14,12:26:23.17:781,23,0	0/0:16,0:17:44.97:0,45,530
chr10	83974815	.	A	ATT	6268.54	PASS	AB=0.555;AC=32;AF=0.571;AN=56;BaseQRankSum=9.713;DP=541;FS=2.655;HRun=10;HaplotypeScore=81.9108;InbreedingCoeff=0.7970;MQ=68.57;MQ0=0;MQRankSum=-2.583;QD=18.12;ReadPosRankSum=-0.058;VQSLOD=3.7368;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:32:52.91:202,53,0	1/1:1,8:10:27.09:386,27,0	0/0:12,0:10:14.31:0,14,132	0/0:8,0:7:9.79:0,10,116	0/0:35,0:35:93.14:0,93,938	0/0:14,0:14:36.07:0,36,366	1/1:6,0:26:45.06:442,45,0	1/1:7,0:24:8.98:96,9,0	0/0:20,0:20:48.08:0,48,488	1/1:5,17:24:56.67:784,57,0	1/1:3,13:17:38.53:495,39,0	0/0:14,0:14:36.05:0,36,366	0/0:17,0:17:42.05:0,42,417	0/0:15,0:16:38.77:0,39,378	1/1:3,18:22:44.64:635,45,0	1/1:5,8:14:26.58:365,27,0	1/1:8,20:31:58.53:787,59,0	1/1:2,13:15:33.11:492,33,0	1/1:2,0:14:5.40:81,5,0	1/1:5,0:30:8.43:189,8,0	0/1:3,0:14:10.17:41,0,10	0/0:21,0:22:47.78:0,48,530	0/0:23,0:25:56.53:0,57,602	0/0:12,0:12:27:0,27,265	0/1:2,0:11:17.53:22,0,18	1/1:6,15:21:45.13:647,45,0	1/1:5,1:25:42.94:185,43,0	1/1:4,11:16:3.48:419,3,0
chr10	83975235	.	CTG	C	1533.18	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.196;DP=609;FS=3.871;HRun=0;HaplotypeScore=69.3345;InbreedingCoeff=0.9801;MQ=73.45;MQ0=1;MQRankSum=-4.670;QD=31.94;ReadPosRankSum=0.314;VQSLOD=5.5669;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1962	0/0:4,0:4:12.04:0,12,208	0/0:30,0:29:60.20:0,60,1016	0/0:19,0:19:54.11:0,54,866	0/0:18,0:18:51.16:0,51,845	0/0:21,0:21:63.20:0,63,1056	0/0:15,0:15:45.11:0,45,685	0/0:40,0:40:99:0,108,1844	0/0:15,0:15:45.12:0,45,721	0/0:26,0:26:75.25:0,75,1266	0/0:27,0:27:78.27:0,78,1345	0/0:20,0:20:60.19:0,60,1012	0/0:16,0:16:42.09:0,42,667	0/0:13,0:13:39.13:0,39,675	1/1:1,29:30:78.21:1016,78,0	0/0:17,0:17:48.16:0,48,831	0/0:29,0:29:81.28:0,81,1381	1/1:1,17:18:48.16:639,48,0	0/0:16,0:16:36.12:0,36,624	0/0:38,0:38:99:0,111,1908	0/0:12,0:12:33.11:0,33,556	0/0:17,0:17:45.14:0,45,752	0/0:24,0:24:72.25:0,72,1239	0/0:28,0:28:84.29:0,84,1442	0/0:26,0:26:66.23:0,66,1137	0/0:21,0:21:63.22:0,63,1091	0/0:23,0:23:69.24:0,69,1194	0/0:6,0:6:18.06:0,18,312
chr10	83976378	.	C	CT	1206.81	PASS	AB=0.790;AC=15;AF=0.268;AN=56;BaseQRankSum=-3.002;DP=465;FS=5.242;HRun=13;HaplotypeScore=55.9230;InbreedingCoeff=0.2055;MQ=62.18;MQ0=3;MQRankSum=0.079;QD=5.36;ReadPosRankSum=-1.945;VQSLOD=1.4549;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,29:42:27.31:384,27,0	0/0:5,0:6:7.95:0,8,47	0/1:17,0:13:4.76:5,0,42	0/0:7,0:3:2.03:0,2,6	0/0:21,0:23:21.96:0,22,147	0/0:22,0:25:14.80:0,15,199	0/1:8,6:13:8.57:72,0,9	0/1:13,13:26:5.25:218,0,5	0/0:16,1:17:1.23:0,1,144	0/1:19,3:21:19.22:19,0,120	0/1:11,1:12:10.76:11,0,83	0/0:10,0:10:20.76:0,21,144	0/0:11,0:13:19.47:0,19,144	0/0:7,0:7:8.90:0,9,61	0/0:17,0:18:30.73:0,31,194	0/0:18,0:17:17.76:0,18,123	0/0:37,1:41:45.03:0,45,415	0/0:18,0:17:9.53:0,10,99	1/1:12,7:20:5.32:148,5,0	1/1:5,4:9:13.26:115,13,0	0/1:6,3:9:42.49:67,0,42	0/0:11,0:12:11.84:0,12,82	0/0:6,0:6:17.86:0,18,123	0/0:13,0:15:30.35:0,30,185	0/1:5,6:11:5.48:96,0,5	0/1:18,1:21:15.56:16,0,157	0/1:6,14:19:0.77:218,0,1	0/0:3,0:3:2.97:0,3,21
chr10	83976605	.	AT	A	950.39	PASS	AB=0.545;AC=21;AF=0.375;AN=56;BaseQRankSum=7.705;DP=509;FS=11.514;HRun=11;HaplotypeScore=74.2748;InbreedingCoeff=0.7830;MQ=68.66;MQ0=13;MQRankSum=-6.879;QD=6.02;ReadPosRankSum=1.309;VQSLOD=0.8866;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,10:15:7.50:132,7,0	1/1:3,0:9:0.50:13,1,0	0/0:60,0:17:10.73:0,11,154	0/0:41,1:17:3.63:0,4,45	0/0:30,0:30:60.11:0,60,615	0/0:28,0:28:52.35:0,52,533	1/1:4,0:7:3.86:17,4,0	0/0:31,0:30:66.13:0,66,679	0/0:10,0:10:24.05:0,24,249	1/1:9,0:18:14.96:43,15,0	1/1:8,0:17:3.50:46,3,0	0/0:17,0:17:39.52:0,40,403	0/0:10,0:10:23.95:0,24,224	0/0:19,1:20:26.14:0,26,418	1/1:2,17:19:41.86:332,42,0	1/1:10,0:14:7.18:35,7,0	1/1:6,0:15:20.85:62,21,0	0/1:3,15:18:5.04:167,0,5	0/0:27,0:25:17.38:0,17,349	0/0:14,0:14:18.63:0,19,245	0/0:8,0:8:15.04:0,15,160	0/0:6,0:6:15.03:0,15,153	0/0:8,0:8:21.05:0,21,224	0/0:9,0:8:21.03:0,21,215	0/0:8,1:9:18.51:0,19,185	1/1:5,10:15:27.66:237,28,0	0/0:19,0:18:35.54:0,36,337	1/1:2,2:4:8.74:62,9,0
chr10	83979443	.	TCA	T	2431.41	PASS	AB=0.543;AC=7;AF=0.125;AN=56;BaseQRankSum=8.716;DP=679;FS=1.044;HRun=0;HaplotypeScore=82.6555;InbreedingCoeff=0.8155;MQ=81.17;MQ0=2;MQRankSum=-2.197;QD=33.31;ReadPosRankSum=-0.257;VQSLOD=5.2632;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1965	0/0:8,0:8:24.08:0,24,450	0/0:12,0:12:36.12:0,36,650	0/0:24,0:24:66.16:0,66,1078	0/0:18,0:18:54.19:0,54,1011	0/0:24,0:24:69.24:0,69,1292	0/0:20,0:20:57.20:0,57,1056	0/0:27,0:27:78.27:0,78,1461	0/0:31,0:31:90.31:0,90,1666	0/0:31,0:31:84.29:0,84,1569	0/0:17,0:17:51.17:0,51,954	0/0:25,0:25:72.21:0,72,1273	0/0:26,0:26:78.27:0,78,1454	0/0:19,0:19:54.18:0,54,988	1/1:0,28:27:78.26:1149,78,0	0/0:32,0:31:96.30:0,96,1729	0/0:22,0:22:63.22:0,63,1171	1/1:1,18:19:48.12:683,48,0	0/0:23,0:23:63.22:0,63,1169	0/0:30,0:30:81.26:0,81,1455	0/0:61,0:61:99:0,175,3221	0/0:18,0:18:54.19:0,54,1008	0/0:32,0:32:93.30:0,93,1708	0/0:26,0:26:75.26:0,75,1394	0/0:21,0:21:60.21:0,60,1123	0/1:3,16:19:61.26:612,0,61	0/0:23,0:22:69.24:0,69,1279	1/1:4,3:6:9.03:133,9,0
chr10	83981936	.	C	CT	5132.87	PASS	AB=0.920;AC=15;AF=0.268;AN=56;BaseQRankSum=-8.002;DP=653;FS=28.308;HRun=9;HaplotypeScore=66.1190;InbreedingCoeff=0.9049;MQ=70.06;MQ0=0;MQRankSum=-0.461;QD=23.87;ReadPosRankSum=2.048;VQSLOD=3.4841;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,42:47:94.19:1251,94,0	1/1:5,11:16:33.09:365,33,0	0/0:10,0:10:14.06:0,14,136	0/0:8,0:8:23.84:0,24,197	0/0:28,0:28:74.92:0,75,637	0/0:21,0:21:56.92:0,57,483	1/1:3,30:33:81.22:896,81,0	0/0:24,0:24:62.97:0,63,545	0/0:26,0:26:68.97:0,69,599	1/1:2,19:21:60.10:631,60,0	1/1:1,15:16:36.10:398,36,0	0/0:20,0:20:41.98:0,42,365	0/0:29,0:29:74.93:0,75,642	0/0:17,0:17:47.93:0,48,407	0/0:32,0:32:83.95:0,84,725	1/1:3,19:22:18.58:556,19,0	1/1:3,34:37:93.25:1029,93,0	0/0:27,2:29:11.60:0,12,555	0/0:18,0:18:35.96:0,36,307	0/0:27,0:27:68.76:0,69,581	0/0:42,0:42:99:0,114,978	0/0:14,0:14:32.99:0,33,286	0/0:18,0:18:47.93:0,48,406	0/0:20,0:20:53.96:0,54,463	0/0:19,0:19:50.98:0,51,443	0/1:21,2:23:6.31:6,0,405	0/0:27,0:27:68.98:0,69,599	0/0:9,0:9:8.97:0,9,78
chr10	83982743	.	AG	A	1138.81	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=3.377;DP=410;FS=3.570;HRun=1;HaplotypeScore=71.3487;InbreedingCoeff=0.6230;MQ=58.98;MQ0=4;MQRankSum=-5.439;QD=7.12;ReadPosRankSum=-3.910;VQSLOD=-0.6052;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:99:180,0,139	1/1:5,0:4:8.45:52,8,0	0/0:10,0:7:13.82:0,14,167	0/0:9,0:9:22.11:0,22,231	0/0:27,0:27:64.80:0,65,624	0/0:21,0:20:25.17:0,25,452	1/1:3,0:3:5.35:29,5,0	0/1:33,0:24:1.68:2,0,327	0/0:9,0:9:20.77:0,21,204	1/1:16,1:17:28.97:245,29,0	1/1:8,5:13:27.69:276,28,0	0/0:11,0:11:29.89:0,30,292	0/0:18,0:18:47.84:0,48,509	0/0:14,0:14:38.92:0,39,382	0/0:8,0:8:16.97:0,17,158	1/1:18,0:18:25.60:210,26,0	1/1:24,3:27:35.03:296,35,0	0/0:8,0:5:8.86:0,9,61	0/0:17,0:16:14.56:0,15,252	0/0:12,0:10:21.03:0,21,215	0/1:7,0:6:15.88:16,0,16	0/0:8,1:9:11.40:0,11,131	0/0:12,0:12:32.74:0,33,293	0/0:11,0:11:26.58:0,27,235	0/0:18,0:17:13.39:0,13,236	0/0:21,0:19:29.77:0,30,277	0/0:15,0:15:29.67:0,30,283	0/1:8,0:8:16.83:17,0,52
chr10	83982762	.	TC	T	577.54	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.494;DP=402;FS=14.665;HRun=4;HaplotypeScore=68.0367;InbreedingCoeff=0.8808;MQ=79.69;MQ0=0;MQRankSum=-6.483;QD=23.10;ReadPosRankSum=0.916;VQSLOD=2.0613;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:57.17:672,57,0	0/0:4,0:4:12.04:0,12,168	0/0:13,0:13:35.95:0,36,459	0/0:17,0:17:47.83:0,48,627	0/0:22,0:22:66.22:0,66,920	0/0:16,0:16:42.14:0,42,587	0/0:4,0:4:9.03:0,9,126	0/0:20,0:20:57.15:0,57,768	0/0:10,0:10:30.10:0,30,419	0/0:21,0:21:57.19:0,57,789	0/0:16,0:16:45.14:0,45,613	0/0:12,0:12:36.12:0,36,504	0/0:17,0:17:48.16:0,48,668	0/0:14,0:14:39.07:0,39,501	0/0:12,0:12:33.11:0,33,453	0/0:21,0:21:63.21:0,63,872	0/0:23,0:23:57.19:0,57,790	0/0:7,0:7:21.07:0,21,294	0/0:16,0:16:36.12:0,36,502	0/0:17,0:17:45.15:0,45,627	0/0:7,0:7:15.05:0,15,209	0/0:7,0:7:18.06:0,18,251	0/0:15,0:15:45.15:0,45,623	0/0:10,0:10:27.08:0,27,358	0/0:16,0:16:42.14:0,42,567	0/0:17,0:17:42.13:0,42,558	0/0:18,0:18:42.13:0,42,555	0/0:5,0:5:15.05:0,15,209
chr10	83982881	.	T	TCAAACAAACAAA	11030.01	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=0.170;DP=461;FS=20.583;HRun=0;HaplotypeScore=180.9876;InbreedingCoeff=0.8883;MQ=64.53;MQ0=1;MQRankSum=-8.567;QD=76.07;ReadPosRankSum=-3.726;VQSLOD=2.3955;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:21:29.89:1147,30,0	1/1:9,0:12:15.05:754,15,0	0/0:20,0:17:15.03:0,15,396	0/0:20,0:18:0.28:0,0,453	0/0:24,0:24:39.13:0,39,1298	0/0:21,0:20:42.14:0,42,1340	1/1:12,0:11:15.05:736,15,0	0/0:27,0:27:30.10:0,30,865	0/0:18,0:18:24.05:0,24,675	1/1:16,12:28:50.63:2491,51,0	1/1:10,16:26:45.15:2292,45,0	0/0:10,0:10:15.05:0,15,467	0/0:13,0:13:33.11:0,33,1040	0/0:11,0:11:15.05:0,15,493	0/0:2,0:7:15.05:0,15,410	1/1:15,12:27:48.16:2759,48,0	1/1:19,0:19:28.03:850,28,0	0/0:2,0:5:6.02:0,6,168	0/0:19,0:19:24.08:0,24,771	0/0:13,0:13:27.09:0,27,940	0/0:10,0:10:21.07:0,21,672	0/0:6,0:6:12.04:0,12,417	0/0:14,0:14:36.11:0,36,1173	0/0:15,0:15:18.06:0,18,626	0/0:6,0:16:11.21:0,11,30	0/0:6,0:23:48.16:0,48,1250	0/0:17,0:17:39.13:0,39,1266	0/0:5,0:7:6.02:0,6,117
chr10	83983033	.	AG	A	1574.90	PASS	AB=1.000;AC=26;AF=0.481;AN=54;BaseQRankSum=-4.403;DP=388;FS=4.195;HRun=1;HaplotypeScore=67.9077;InbreedingCoeff=0.3353;MQ=50.12;MQ0=41;MQRankSum=-3.457;QD=4.92;ReadPosRankSum=-1.652;VQSLOD=-0.1402;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:3:0.02:0,0,3	0/0:2,0:2:2.80:0,3,7	0/1:39,0:9:7.51:8,0,35	0/1:28,0:5:0.12:0,0,5	0/1:32,0:31:79.76:80,0,121	0/1:17,0:17:31.62:77,0,32	./.	1/1:36,0:34:42.63:274,43,0	1/1:17,0:14:11.89:97,12,0	0/0:13,0:8:11.51:0,12,39	0/0:3,0:3:4.52:0,5,12	1/1:12,0:12:11.36:88,11,0	0/1:14,0:13:26.95:33,0,27	1/1:11,0:10:13.27:80,13,0	0/0:5,0:5:7.47:0,7,18	0/0:6,0:5:7.99:0,8,20	0/0:3,0:1:1.25:0,1,3	0/0:3,0:2:2.13:0,2,6	1/1:30,0:24:39.47:310,39,0	1/1:18,0:17:27.13:177,27,0	0/1:4,0:4:0.19:22,0,0	1/1:2,2:4:2.13:4,2,0	0/0:13,6:17:10.20:0,10,104	0/1:14,0:10:19.03:37,0,19	1/1:19,0:19:21:242,21,0	0/0:8,0:6:3.32:0,3,14	1/1:21,0:19:33.80:207,34,0	0/0:4,0:2:2.49:0,2,6
chr10	83983037	.	A	ATC	1243.17	PASS	AB=0.840;AC=20;AF=0.370;AN=54;BaseQRankSum=9.170;DP=399;FS=6.798;HRun=0;HaplotypeScore=80.0405;InbreedingCoeff=0.7855;MQ=51.79;MQ0=39;MQRankSum=-5.369;QD=15.35;ReadPosRankSum=6.779;VQSLOD=2.5862;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:3,2:4:5.49:75,0,5	1/1:0,2:2:6.02:85,6,0	0/0:43,0:11:24.41:0,24,232	0/1:28,0:5:0.21:0,0,93	0/0:32,0:31:69.69:0,70,991	0/0:17,0:17:41.72:0,42,541	./.	0/0:38,0:36:81.77:0,82,904	0/0:17,0:14:33.05:0,33,422	1/1:5,7:8:9.57:288,10,0	1/1:1,3:4:9.50:131,10,0	0/0:12,0:12:33.11:0,33,453	0/0:13,0:12:27.03:0,27,347	0/0:12,0:11:27.09:0,27,367	1/1:0,5:5:15.05:207,15,0	1/1:1,5:5:15.05:213,15,0	1/1:2,1:1:3.01:43,3,0	1/1:2,2:3:8.86:95,9,0	0/0:31,0:25:72.40:0,72,848	0/0:19,0:18:42.12:0,42,506	0/0:4,0:4:10.55:0,11,91	0/0:6,0:6:12.04:0,12,165	0/0:19,0:17:39.11:0,39,559	0/0:12,0:9:12.98:0,13,178	0/0:19,0:19:54.16:0,54,649	1/1:2,5:5:15.05:213,15,0	0/0:22,0:20:54.15:0,54,656	1/1:2,2:2:6.02:83,6,0
chr10	83984568	.	GA	G	1907.76	PASS	AB=0.825;AC=13;AF=0.232;AN=56;BaseQRankSum=2.977;DP=601;FS=4.315;HRun=12;HaplotypeScore=68.8102;InbreedingCoeff=0.7057;MQ=61.33;MQ0=5;MQRankSum=0.745;QD=10.15;ReadPosRankSum=-0.459;VQSLOD=2.9558;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:34:23:0,23,124	0/0:7,0:7:18.04:0,18,183	0/0:19,0:12:17.64:0,18,221	0/1:17,0:8:8.22:8,0,101	0/0:31,2:33:57.84:0,58,723	0/0:22,1:24:30.65:0,31,460	0/0:5,0:18:25.89:0,26,155	1/1:6,20:27:58.80:447,59,0	0/0:17,0:17:37.08:0,37,382	0/1:20,3:25:10.42:10,0,414	0/0:17,1:18:26.20:0,26,412	0/0:18,0:19:27.27:0,27,309	0/0:18,0:18:33.06:0,33,330	0/0:8,0:8:21.04:0,21,213	0/0:7,0:26:19.62:0,20,100	0/0:30,1:31:57.90:0,58,753	0/0:28,1:29:48.89:0,49,670	0/0:8,0:15:14.35:0,14,80	0/1:6,14:21:17.19:239,0,17	1/1:7,15:22:17.36:316,17,0	1/1:2,13:15:29.87:232,30,0	0/0:14,0:15:38.90:0,39,374	0/0:24,0:25:59.74:0,60,555	0/0:19,0:19:42.07:0,42,419	1/1:4,20:24:17.36:318,17,0	0/0:6,0:22:41.66:0,42,235	1/1:9,28:37:19.77:518,20,0	0/0:0,0:16:34.09:0,34,173
chr10	83985006	.	AACACAC	A	499.67	PASS	AB=1.000;AC=16;AF=0.308;AN=52;BaseQRankSum=4.603;DP=567;FS=8.495;HRun=0;HaplotypeScore=113.4944;InbreedingCoeff=0.6281;MQ=66.05;MQ0=10;MQRankSum=-2.037;QD=2.84;ReadPosRankSum=-2.028;VQSLOD=0.8619;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:23.97:0,24,345	1/1:5,3:8:8.66:91,9,0	./.	./.	0/0:14,0:16:11.89:0,12,297	0/0:19,0:19:33.09:0,33,735	1/1:17,0:27:3.01:42,3,0	0/0:27,0:26:9:0,9,116	0/1:19,0:19:30.19:30,0,453	1/1:9,0:8:5.82:72,6,0	1/1:16,0:20:2.82:14,3,0	0/1:15,0:15:7.28:7,0,315	0/0:22,0:22:45.08:0,45,915	0/0:18,0:18:30.08:0,30,628	1/1:14,2:28:11.34:46,11,0	1/1:11,14:25:15.05:303,15,0	1/1:13,10:23:3.01:61,3,0	0/0:11,0:10:8.14:0,8,106	0/0:11,0:11:8.06:0,8,156	0/0:18,0:18:26.66:0,27,559	0/0:17,0:36:18.06:0,18,440	0/0:21,0:20:31.29:0,31,628	0/0:12,0:12:15.04:0,15,252	0/0:28,0:30:47.30:0,47,1236	0/0:23,0:23:26.03:0,26,544	0/0:16,0:16:18.14:0,18,299	0/0:25,0:27:48.06:0,48,1006	0/0:4,0:5:6.02:0,6,131
chr10	83987741	.	C	CT	3495.12	PASS	AB=0.936;AC=23;AF=0.411;AN=56;BaseQRankSum=-5.780;DP=396;FS=0.000;HRun=10;HaplotypeScore=58.3654;InbreedingCoeff=0.7644;MQ=69.71;MQ0=3;MQRankSum=0.786;QD=17.22;ReadPosRankSum=-0.872;VQSLOD=3.7276;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:11:31.96:0,32,247	1/1:2,5:7:18:177,18,0	0/1:21,0:15:23.67:24,0,115	0/0:15,0:9:13.55:0,14,88	0/0:24,0:25:70.95:0,71,572	0/0:11,0:11:32.92:0,33,264	0/0:19,0:19:47.94:0,48,394	1/1:7,12:20:14.25:329,14,0	0/0:5,0:5:14.98:0,15,123	1/1:5,22:27:16.67:578,17,0	1/1:2,13:16:33.08:346,33,0	0/0:23,0:23:56.91:0,57,468	0/0:5,0:5:14.98:0,15,123	0/1:9,1:10:5.01:5,0,170	0/0:6,0:6:17.01:0,17,129	1/1:6,19:25:13.99:558,14,0	1/1:1,17:18:42.10:447,42,0	0/0:15,0:15:41.85:0,42,330	1/1:6,14:21:25.20:409,25,0	1/1:0,5:5:12.03:128,12,0	1/1:0,3:3:6.02:64,6,0	0/0:6,0:6:17.98:0,18,148	0/0:11,0:11:32.93:0,33,265	0/0:6,0:6:17.98:0,18,148	0/0:16,0:16:44.94:0,45,369	0/0:18,1:19:21.91:0,22,380	1/1:2,18:20:20.55:421,21,0	0/1:8,1:9:8.05:8,0,142
chr10	83988693	.	T	TA	3619.24	PASS	AB=0.929;AC=14;AF=0.250;AN=56;BaseQRankSum=-2.209;DP=610;FS=2.286;HRun=11;HaplotypeScore=86.4366;InbreedingCoeff=0.8061;MQ=75.76;MQ0=4;MQRankSum=0.030;QD=19.15;ReadPosRankSum=0.348;VQSLOD=4.4176;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:26:53.94:531,54,0	1/1:4,14:18:36.07:366,36,0	0/0:32,0:24:14.63:0,15,155	0/1:20,0:14:18.95:19,0,57	0/0:22,2:24:26.28:0,26,381	0/0:16,0:16:41.84:0,42,325	0/0:14,0:14:29.88:0,30,232	0/0:8,0:32:46.57:0,47,138	0/0:17,0:17:47.78:0,48,364	1/1:5,26:31:78.14:782,78,0	1/1:7,26:33:75.11:750,75,0	0/0:11,0:11:29.87:0,30,230	0/0:20,0:20:53.79:0,54,418	0/0:15,0:15:35.83:0,36,279	0/0:21,0:21:59.77:0,60,464	1/1:4,18:23:53.94:532,54,0	1/1:2,24:25:60.12:609,60,0	0/0:9,0:9:23.89:0,24,183	0/0:2,0:17:30.55:0,31,88	0/0:4,0:32:60.97:0,61,206	0/0:0,0:11:20.37:0,20,59	0/0:21,0:21:59.72:0,60,457	0/0:28,1:29:44.22:0,44,520	0/1:10,2:12:30.99:31,0,156	0/0:22,0:22:53.77:0,54,414	0/0:25,0:25:65.74:0,66,511	0/0:6,0:36:57.03:0,57,165	0/0:15,0:15:29.83:0,30,232
chr10	83990915	.	TAC	T	3550.16	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.066;DP=825;FS=0.372;HRun=0;HaplotypeScore=111.0284;InbreedingCoeff=0.9489;MQ=60.24;MQ0=8;MQRankSum=0.141;QD=22.33;ReadPosRankSum=1.513;VQSLOD=4.3022;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,25:31:48.26:746,48,0	0/0:7,0:7:21.07:0,21,339	0/0:29,0:14:17.05:0,17,260	0/0:17,0:11:23.95:0,24,312	0/0:29,2:31:53.92:0,54,1358	0/0:37,1:38:72.63:0,73,1535	1/1:6,11:17:6.39:218,6,0	0/0:14,0:38:56.35:0,56,436	0/0:31,0:31:81.25:0,81,1270	0/0:40,0:40:99:0,101,1508	0/0:33,1:34:50.88:0,51,1287	0/0:35,0:35:48.09:0,48,1232	0/0:25,0:25:66.17:0,66,982	0/0:30,1:31:47.88:0,48,1231	1/1:6,34:39:77.91:921,78,0	0/0:36,1:37:56.93:0,57,1397	0/0:15,0:15:36.08:0,36,530	1/1:3,10:13:18.74:381,19,0	0/0:11,0:15:19.05:0,19,142	0/0:8,0:39:89.99:0,90,812	0/0:7,0:41:77.98:0,78,687	0/0:30,1:31:46.70:0,47,1215	0/0:26,0:26:72.23:0,72,1138	0/0:23,0:23:54.14:0,54,820	0/0:38,1:39:55.16:0,55,1380	1/1:7,35:42:5.52:1030,6,0	0/0:10,0:40:92.23:0,92,827	1/1:5,11:16:21.06:255,21,0
chr10	83992433	.	GCC	G	360.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.244;DP=763;FS=8.858;HRun=2;HaplotypeScore=100.2452;InbreedingCoeff=0.9974;MQ=77.30;MQ0=0;MQRankSum=-6.838;QD=20.05;ReadPosRankSum=1.679;VQSLOD=1.0584;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,2513	0/0:8,0:8:24.08:0,24,488	0/0:14,0:14:39:0,39,666	0/0:18,0:18:48:0,48,782	0/0:28,0:28:84.27:0,84,1657	0/0:22,0:22:66.23:0,66,1341	0/0:37,0:37:99:0,111,2243	0/0:25,0:25:69.24:0,69,1402	0/0:25,0:25:72.25:0,72,1442	0/0:36,0:36:99:0,108,2151	0/0:21,0:21:63.22:0,63,1270	0/0:39,0:39:99:0,117,2306	0/0:34,0:34:99:0,102,2021	0/0:50,0:50:99:0,150,2987	0/0:35,0:34:99:0,105,2085	0/0:31,0:31:93.31:0,93,1839	0/0:27,0:27:81.28:0,81,1622	0/0:28,0:28:81.28:0,81,1629	0/0:22,0:22:63.22:0,63,1267	0/0:23,0:23:69.22:0,69,1351	0/0:55,0:55:99:0,163,3253	0/0:15,0:15:45.15:0,45,902	0/0:17,0:17:51.18:0,51,1034	0/0:25,0:25:75.26:0,75,1490	1/1:1,17:18:50.55:456,51,0	0/0:25,0:25:75.26:0,75,1518	0/0:32,0:32:96.32:0,96,1894	0/0:10,0:10:30.10:0,30,609
chr10	83992436	.	TTCCTTTCA	T	1046.74	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.056;DP=765;FS=10.806;HRun=0;HaplotypeScore=195.8428;InbreedingCoeff=0.9974;MQ=77.28;MQ0=0;MQRankSum=-7.038;QD=61.57;ReadPosRankSum=2.046;VQSLOD=2.9709;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,5856	0/0:8,0:8:24.08:0,24,1099	0/0:15,0:15:42.14:0,42,1512	0/0:17,0:17:48.14:0,48,1972	0/0:28,0:28:84.28:0,84,3735	0/0:22,0:22:66.23:0,66,2912	0/0:39,0:39:99:0,117,5058	0/0:25,0:25:72.25:0,72,3169	0/0:23,0:23:69.24:0,69,3124	0/0:36,0:36:99:0,105,4704	0/0:21,0:21:63.22:0,63,2916	0/0:41,0:41:99:0,123,5556	0/0:35,0:35:99:0,105,4473	0/0:50,0:50:99:0,151,6512	0/0:33,0:32:99:0,99,4584	0/0:30,0:30:90.31:0,90,4099	0/0:27,0:27:81.25:0,81,3351	0/0:28,0:28:81.28:0,81,3679	0/0:22,0:22:66.23:0,66,2823	0/0:22,0:22:66.23:0,66,2989	0/0:54,0:54:99:0,160,7255	0/0:15,0:15:45.14:0,45,1970	0/0:17,0:17:51.18:0,51,2320	0/0:25,0:25:75.23:0,75,3178	1/1:0,17:17:51.17:1142,51,0	0/0:26,0:26:78.27:0,78,3516	0/0:36,0:36:99:0,108,4755	0/0:10,0:10:30.10:0,30,1316
chr10	83993417	.	T	TA	964.78	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=-4.745;DP=561;FS=2.204;HRun=8;HaplotypeScore=57.5385;InbreedingCoeff=0.5429;MQ=63.04;MQ0=0;MQRankSum=1.546;QD=10.37;ReadPosRankSum=-2.560;VQSLOD=1.5197;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:36:7.98:8,0,116	0/0:6,0:6:18.01:0,18,164	0/0:7,0:6:2.20:0,2,45	0/0:9,0:6:5.37:0,5,35	0/0:31,0:31:74.97:0,75,669	0/0:29,0:29:84.01:0,84,759	0/0:10,0:10:24:0,24,216	0/0:42,0:42:99:0,120,1071	0/0:15,0:15:38.98:0,39,342	0/0:30,0:30:48.75:0,49,619	0/0:21,0:21:54.03:0,54,494	0/0:18,0:18:50.99:0,51,456	0/0:24,0:24:66.01:0,66,597	0/0:12,0:12:33.01:0,33,298	1/1:3,18:21:42.02:484,42,0	0/0:21,0:21:54.02:0,54,494	0/0:35,0:35:92.01:0,92,807	1/1:1,19:20:48.14:553,48,0	0/0:26,0:26:55.50:0,55,515	0/0:28,0:28:69.02:0,69,627	0/0:13,0:13:36.01:0,36,329	0/0:2,0:2:3:0,3,27	0/0:18,0:18:42.01:0,42,381	0/0:11,0:11:30.02:0,30,274	0/0:22,0:22:65.96:0,66,584	0/1:16,0:16:11.96:52,0,12	0/0:23,0:23:54.01:0,54,494	0/0:15,0:15:32.12:0,32,105
chr10	83993875	.	T	TA	769.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.815;DP=622;FS=1.808;HRun=2;HaplotypeScore=58.1261;InbreedingCoeff=0.9887;MQ=79.69;MQ0=0;MQRankSum=-2.960;QD=29.58;ReadPosRankSum=-0.374;VQSLOD=3.0600;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:60.20:864,60,0	0/0:7,0:7:18.06:0,18,223	0/0:14,0:14:36.11:0,36,445	0/0:17,0:16:34.01:0,34,416	0/0:28,0:28:78.24:0,78,967	0/0:24,0:24:69.20:0,69,842	0/0:13,0:13:39.12:0,39,483	0/0:30,0:30:84.26:0,84,1040	0/0:21,0:21:63.20:0,63,781	0/0:22,0:22:60.18:0,60,733	0/0:20,0:20:60.18:0,60,730	0/0:32,0:32:96.30:0,96,1190	0/0:19,0:19:57.15:0,57,681	0/0:23,0:23:63.18:0,63,768	0/0:33,0:33:90.27:0,90,1103	0/0:38,0:38:99:0,111,1350	0/0:25,0:25:75.24:0,75,930	0/0:17,0:17:51.16:0,51,632	0/0:28,0:28:75.09:0,75,917	0/0:34,0:34:96.30:0,96,1189	0/0:10,0:10:27.08:0,27,335	0/0:22,0:22:63.19:0,63,769	0/0:21,0:21:57.07:0,57,705	0/0:22,0:22:63.20:0,63,780	0/0:25,0:25:72.17:0,72,844	0/0:18,0:18:54.16:0,54,659	0/0:25,0:25:75.24:0,75,930	0/0:8,0:8:24.08:0,24,298
chr10	83994943	.	CGTT	C	1753.91	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.251;DP=755;FS=0.607;HRun=0;HaplotypeScore=101.4899;InbreedingCoeff=0.9834;MQ=80.44;MQ0=0;MQRankSum=-2.345;QD=33.73;ReadPosRankSum=2.963;VQSLOD=4.2423;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,111,2559	0/0:13,0:13:39.13:0,39,899	0/0:23,0:23:66.23:0,66,1479	0/0:15,0:15:42.12:0,42,893	0/0:20,0:20:60.21:0,60,1365	0/0:23,0:23:69.22:0,69,1545	0/0:33,0:33:99:0,99,2179	0/0:31,0:31:87.30:0,87,2002	0/0:26,0:26:72.21:0,72,1610	0/0:28,0:28:84.28:0,84,1893	0/0:10,0:10:27.08:0,27,601	0/0:53,0:53:99:0,154,3496	0/0:32,0:32:93.32:0,93,2125	0/0:35,0:35:99:0,105,2365	1/1:3,31:34:12.09:1258,12,0	0/0:24,0:24:72.25:0,72,1654	0/0:39,0:39:99:0,117,2475	1/1:1,17:18:36.12:612,36,0	0/0:23,0:23:66.22:0,66,1424	0/0:18,0:18:54.19:0,54,1232	0/0:50,0:50:99:0,148,3341	0/0:22,0:22:66.21:0,66,1401	0/0:23,0:23:66.23:0,66,1499	0/0:37,0:37:99:0,108,2402	0/0:24,0:24:66.23:0,66,1522	0/0:28,0:28:84.29:0,84,1926	0/0:18,0:18:54.19:0,54,1245	0/0:12,0:12:36.12:0,36,830
chr10	83995023	.	A	AC	1074.52	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.631;DP=673;FS=6.872;HRun=6;HaplotypeScore=65.3050;InbreedingCoeff=0.9601;MQ=83.41;MQ0=0;MQRankSum=-3.206;QD=24.42;ReadPosRankSum=1.627;VQSLOD=3.6851;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,38:44:93.30:1169,93,0	0/0:6,0:6:11.99:0,12,113	0/0:22,0:22:51.11:0,51,560	0/0:22,0:22:40.59:0,41,517	0/0:22,0:22:60.13:0,60,610	0/0:20,0:20:42.09:0,42,428	0/0:29,0:29:72.16:0,72,734	0/0:23,0:23:48.10:0,48,489	0/0:24,0:24:60.13:0,60,612	0/0:22,0:22:60.13:0,60,611	0/0:8,0:8:24.05:0,24,244	0/0:42,0:42:99:0,114,1156	0/0:38,0:38:99:0,108,1087	0/0:27,0:27:75.15:0,75,758	0/0:24,0:24:66.15:0,66,673	0/0:31,0:31:81.18:0,81,826	0/0:38,0:38:99:0,111,1125	0/0:22,0:22:60.01:0,60,596	0/0:29,0:29:72.14:0,72,722	0/0:20,0:20:57.09:0,57,567	0/0:40,0:40:99:0,102,1041	0/0:21,0:21:60.13:0,60,610	0/0:11,0:11:33.06:0,33,329	0/0:36,0:36:90.18:0,90,911	0/0:17,0:17:48.11:0,48,490	0/0:14,0:14:36.08:0,36,367	0/0:14,0:14:42.10:0,42,428	0/0:7,0:7:18.04:0,18,184
chr10	83997248	.	T	TC	17895.08	PASS	AB=0.967;AC=54;AF=0.964;AN=56;BaseQRankSum=-2.311;DP=627;FS=3.026;HRun=5;HaplotypeScore=146.7931;InbreedingCoeff=-0.0373;MQ=67.82;MQ0=6;MQRankSum=-2.470;QD=28.54;ReadPosRankSum=3.144;VQSLOD=2.9179;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:41:99:1310,108,0	1/1:0,7:7:21.07:261,21,0	0/1:12,1:13:46.22:82,0,46	0/1:24,0:17:42.12:47,0,42	1/1:6,22:27:61.95:686,62,0	1/1:1,26:27:69.07:800,69,0	1/1:4,24:28:63.17:750,63,0	1/1:3,22:25:63.18:765,63,0	1/1:0,15:14:42.13:516,42,0	1/1:7,28:35:96.29:1185,96,0	1/1:1,16:17:30.08:349,30,0	1/1:0,20:20:54.17:674,54,0	1/1:4,13:17:42.13:517,42,0	1/1:3,18:21:51.15:635,51,0	1/1:3,29:32:69.20:867,69,0	1/1:2,28:30:84.25:1036,84,0	1/1:1,20:21:25.29:652,25,0	1/1:1,14:15:36.12:458,36,0	1/1:4,11:14:30.03:356,30,0	1/1:1,24:24:63.12:753,63,0	1/1:5,25:29:75.21:920,75,0	1/1:1,11:12:30.02:335,30,0	1/1:5,18:23:48.15:605,48,0	1/1:3,21:24:63.20:791,63,0	1/1:3,17:20:57.11:700,57,0	1/1:1,26:27:78.25:987,78,0	1/1:4,16:20:48.11:567,48,0	1/1:3,10:13:24.95:292,25,0
chr10	83998354	.	AG	A	23582.98	PASS	AB=0.770;AC=55;AF=0.982;AN=56;BaseQRankSum=-4.106;DP=796;FS=3.455;HRun=3;HaplotypeScore=103.0333;InbreedingCoeff=-0.0259;MQ=64.47;MQ0=9;MQRankSum=0.512;QD=29.63;ReadPosRankSum=3.677;VQSLOD=4.3456;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,48:49:99:1581,129,0	1/1:0,10:10:30.09:371,30,0	1/1:17,11:12:1.94:272,2,0	0/1:33,14:25:51.76:436,0,52	1/1:1,31:32:84.26:1039,84,0	1/1:1,26:27:66.21:818,66,0	1/1:2,24:26:60.19:743,60,0	1/1:3,23:24:63.15:758,63,0	1/1:0,22:22:60.19:741,60,0	1/1:3,23:24:46.34:795,46,0	1/1:0,18:18:42.13:517,42,0	1/1:1,31:32:93.29:1153,93,0	1/1:2,33:35:90.28:1116,90,0	1/1:1,43:44:99:1222,99,0	1/1:0,34:34:93.29:1150,93,0	1/1:2,32:34:90.28:1115,90,0	1/1:4,26:30:72.22:884,72,0	1/1:4,24:27:61.54:747,62,0	1/1:1,22:23:66.16:786,66,0	1/1:3,19:22:16.06:584,16,0	1/1:0,33:33:84.26:1037,84,0	1/1:0,18:18:51.16:632,51,0	1/1:0,25:25:69.22:855,69,0	1/1:2,28:30:72.23:889,72,0	1/1:0,23:23:60.19:744,60,0	1/1:0,31:31:90.28:1113,90,0	1/1:0,29:29:80.94:1002,81,0	1/1:0,14:14:39.12:483,39,0
chr10	83999040	.	A	AT	2127.87	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-3.335;DP=574;FS=0.433;HRun=9;HaplotypeScore=59.1418;InbreedingCoeff=0.9087;MQ=59.28;MQ0=1;MQRankSum=0.593;QD=20.46;ReadPosRankSum=1.299;VQSLOD=4.1482;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:25.92:169,26,0	0/0:4,0:4:8.99:0,9,76	0/0:13,0:6:7.99:0,8,45	0/0:6,0:6:0.60:0,1,22	0/0:24,1:25:35.78:0,36,535	0/0:30,0:30:77.89:0,78,663	0/0:2,0:14:20.37:0,20,60	0/0:39,0:39:86.73:0,87,796	0/0:22,0:22:53.95:0,54,465	0/0:23,0:23:62.88:0,63,535	0/0:22,0:22:59.88:0,60,511	0/0:26,0:26:59.92:0,60,511	0/0:21,0:21:53.91:0,54,460	0/0:20,0:20:44.88:0,45,379	1/1:2,25:27:60.16:663,60,0	0/0:23,0:23:65.84:0,66,556	0/0:26,0:26:71.90:0,72,606	1/1:6,14:19:51.12:553,51,0	0/0:22,0:22:47.01:0,47,397	0/0:20,0:20:53.98:0,54,469	0/0:20,0:20:53.98:0,54,466	0/0:16,0:16:38.97:0,39,336	0/0:13,0:13:38.97:0,39,332	0/0:12,0:12:23.99:0,24,208	0/0:19,0:19:47.97:0,48,414	1/1:2,27:29:72.15:781,72,0	0/0:32,1:33:86.84:0,87,736	1/1:1,5:6:12.03:133,12,0
chr10	83999049	.	T	TA	881.80	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=7.809;DP=587;FS=0.000;HRun=7;HaplotypeScore=62.7428;InbreedingCoeff=0.4816;MQ=63.84;MQ0=1;MQRankSum=-0.020;QD=7.87;ReadPosRankSum=2.902;VQSLOD=0.1912;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:54.03:619,54,0	0/0:4,0:4:9.01:0,9,83	0/0:16,0:8:9.60:0,10,87	0/1:7,0:6:3.09:3,0,18	0/0:28,0:28:73.38:0,73,697	0/0:31,0:31:83.86:0,84,760	0/0:14,0:14:34.92:0,35,198	0/0:38,0:38:96.07:0,96,897	0/0:19,0:19:51.07:0,51,487	0/0:23,0:23:63.08:0,63,597	0/0:23,0:23:66.04:0,66,617	0/0:24,0:24:62.95:0,63,574	0/0:21,0:21:60.04:0,60,559	0/0:20,0:20:53.90:0,54,480	0/1:27,0:27:1.66:152,0,2	0/0:26,0:26:68.74:0,69,623	0/0:29,0:29:71.95:0,72,650	0/1:21,0:20:16.25:89,0,16	0/0:20,0:20:54.01:0,54,497	0/0:23,0:23:68.99:0,69,633	0/0:20,0:20:54.07:0,54,514	0/0:19,0:19:53.99:0,54,489	0/0:17,0:17:45.01:0,45,409	0/0:11,0:11:29.97:0,30,274	0/0:19,0:19:51.05:0,51,480	1/1:28,0:28:6.66:138,7,0	0/0:30,0:30:84.08:0,84,798	0/1:8,0:8:16.53:17,0,31
chr10	83999167	.	AAGGCTAATCTTTCCT	A	9423.58	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.340;DP=583;FS=4.202;HRun=0;HaplotypeScore=344.5275;InbreedingCoeff=0.9877;MQ=81.41;MQ0=0;MQRankSum=-8.879;QD=110.87;ReadPosRankSum=3.297;VQSLOD=3.9010;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:60.19:0,60,4013	1/1:1,10:11:30.10:1349,30,0	0/0:20,0:20:54.14:0,54,2883	0/0:26,0:26:72.25:0,72,3929	0/0:19,0:19:54.19:0,54,3691	0/0:30,0:30:90.31:0,90,5924	1/1:1,3:4:9.03:405,9,0	0/0:32,0:32:84.25:0,84,5099	0/0:19,0:19:54.19:0,54,3496	1/1:6,16:22:60.21:2564,60,0	1/1:5,11:16:39.13:1669,39,0	0/0:29,0:28:84.26:0,84,5431	0/0:21,0:21:57.20:0,57,3491	0/0:26,0:26:72.25:0,72,4801	0/0:30,0:30:81.28:0,81,5660	1/1:2,16:18:48.16:2160,48,0	1/1:5,9:14:33.11:1276,33,0	0/0:16,0:15:39.13:0,39,2885	0/0:16,0:16:45.15:0,45,2939	0/0:24,0:24:72.25:0,72,4797	0/0:14,0:14:42.14:0,42,2567	0/0:21,0:21:63.22:0,63,4188	0/0:27,0:27:78.27:0,78,5535	0/0:12,0:12:33.11:0,33,2084	0/0:26,0:26:78.27:0,78,5144	0/0:21,0:21:63.19:0,63,4026	0/0:36,0:36:99:0,102,6979	0/0:9,0:9:27.09:0,27,1976
chr10	84000359	.	C	CA	1563.12	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.448;DP=680;FS=17.938;HRun=5;HaplotypeScore=87.5018;InbreedingCoeff=0.9838;MQ=91.32;MQ0=0;MQRankSum=-5.030;QD=32.57;ReadPosRankSum=1.164;VQSLOD=1.9933;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,47:48:99:1658,126,0	0/0:8,0:8:15.01:0,15,150	0/0:32,0:32:87.19:0,87,913	0/0:30,0:29:61.96:0,62,663	0/0:23,0:23:54.10:0,54,563	0/0:15,0:15:42.09:0,42,443	0/0:24,0:24:66.12:0,66,684	0/0:38,0:38:84.10:0,84,894	0/0:23,0:23:63.16:0,63,677	0/0:27,0:27:75.18:0,75,801	0/0:15,0:15:42.11:0,42,451	0/0:33,0:33:99:0,99,1048	0/0:18,0:18:48.10:0,48,505	0/0:26,0:26:72.17:0,72,765	0/0:23,0:23:66.16:0,66,709	0/0:25,0:25:72.14:0,72,750	0/0:29,0:29:84.21:0,84,902	0/0:28,0:28:78.17:0,78,828	0/0:21,0:21:63.12:0,63,658	0/0:20,0:20:48.12:0,48,516	0/0:24,0:24:66.14:0,66,699	0/0:23,0:23:66.16:0,66,706	0/0:26,0:26:69.15:0,69,732	0/0:32,0:32:93.22:0,93,990	0/0:16,0:16:45.09:0,45,473	0/0:18,0:18:51.11:0,51,538	0/0:25,0:24:71.85:0,72,752	0/0:10,0:10:30.08:0,30,322
chr10	84000615	.	C	CT	1868.24	PASS	AB=0.987;AC=32;AF=0.571;AN=56;BaseQRankSum=13.782;DP=560;FS=5.667;HRun=3;HaplotypeScore=86.6991;InbreedingCoeff=-0.3088;MQ=74.08;MQ0=0;MQRankSum=0.357;QD=3.81;ReadPosRankSum=6.233;VQSLOD=0.2849;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:72.70:0,73,909	1/1:12,0:12:26.87:89,27,0	0/1:13,3:15:66.67:82,0,67	0/1:10,1:11:40.38:46,0,40	0/1:22,0:22:25:98,0,25	0/1:30,0:30:2.66:135,0,3	0/1:15,0:15:40.88:46,0,41	0/1:32,0:32:60.90:96,0,61	1/1:17,0:17:13.88:94,14,0	0/0:25,0:25:63.14:0,63,722	0/0:15,0:15:42.07:0,42,483	1/1:19,0:19:17.26:102,17,0	0/1:20,0:20:65.24:65,0,147	0/1:13,0:13:10.03:58,0,10	0/1:28,0:28:68.40:95,0,68	0/1:38,0:38:40.43:146,0,40	1/1:19,0:19:9.46:115,9,0	0/1:7,0:8:12.83:30,0,13	0/1:21,0:21:34.18:34,0,121	1/1:16,0:16:12.54:110,13,0	0/1:22,0:22:25.24:78,0,25	0/1:18,0:18:6.49:79,0,6	0/1:15,0:15:13.06:63,0,13	1/1:23,0:23:3.18:106,3,0	1/1:21,0:21:8.19:89,8,0	0/1:26,0:26:70.56:71,0,94	0/1:16,0:16:28.91:71,0,29	0/1:12,0:12:32.76:42,0,33
chr10	84001084	.	GGT	G	7344.11	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.513;DP=627;FS=3.899;HRun=0;HaplotypeScore=74.7976;InbreedingCoeff=0.9974;MQ=84.49;MQ0=0;MQRankSum=-4.485;QD=41.26;ReadPosRankSum=3.669;VQSLOD=6.9501;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:84.29:1286,84,0	1/1:0,11:11:27.09:413,27,0	0/0:23,0:23:60.04:0,60,1094	0/0:16,0:16:20.11:0,20,773	0/0:31,0:31:93.22:0,93,1597	0/0:12,0:12:36.12:0,36,695	1/1:1,28:29:78.26:1194,78,0	0/0:27,0:27:78.27:0,78,1489	0/0:14,0:14:42.13:0,42,778	1/1:1,32:33:93.32:1418,93,0	1/1:1,19:20:51.17:781,51,0	0/0:22,0:22:66.23:0,66,1250	0/0:18,0:18:54.19:0,54,1043	0/0:20,0:20:57.19:0,57,1087	0/0:33,0:33:99:0,99,1905	1/1:0,25:25:72.24:1103,72,0	1/1:0,28:28:75.25:1149,75,0	0/0:20,0:20:60.21:0,60,1155	0/0:22,0:22:66.22:0,66,1219	0/0:16,0:16:48.16:0,48,926	0/0:24,0:24:66.23:0,66,1249	0/0:23,0:23:69.24:0,69,1326	0/0:33,0:33:99:0,99,1853	0/0:14,0:14:42.14:0,42,811	0/0:22,0:22:60.19:0,60,1126	0/0:25,0:25:75.25:0,75,1408	0/0:28,0:28:81.24:0,81,1494	0/0:6,0:6:18.06:0,18,348
chr10	84001315	.	A	AAC	3957.38	PASS	AB=0.756;AC=10;AF=0.179;AN=56;BaseQRankSum=-11.909;DP=777;FS=17.582;HRun=0;HaplotypeScore=97.5531;InbreedingCoeff=0.7498;MQ=69.57;MQ0=1;MQRankSum=-2.184;QD=28.27;ReadPosRankSum=0.286;VQSLOD=3.5361;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:63.19:0,63,750	1/1:5,6:11:15.05:238,15,0	0/0:31,0:26:38.70:0,39,374	0/0:30,0:28:42.17:0,42,430	0/0:24,0:27:65.87:0,66,742	0/0:20,0:20:29.92:0,30,336	0/0:27,0:29:68.84:0,69,754	0/0:35,0:37:61.57:0,62,698	0/0:30,0:33:80.74:0,81,900	1/1:5,26:32:45.47:1155,45,0	1/1:1,9:11:30.10:460,30,0	0/0:23,0:23:32.20:0,32,618	0/0:25,0:28:65.67:0,66,699	0/0:27,0:27:57.17:0,57,679	0/0:39,0:41:99:0,105,1207	1/1:8,31:40:51.53:1302,52,0	0/1:11,18:29:73.83:796,0,74	0/1:15,2:17:5.66:6,0,419	0/0:13,0:15:10.80:0,11,185	0/0:19,0:22:56.67:0,57,614	0/0:55,0:58:99:0,147,1687	0/0:18,0:21:47.64:0,48,503	0/0:28,0:30:26.97:0,27,703	0/0:32,0:32:72.22:0,72,858	0/0:18,0:20:50.82:0,51,564	0/0:33,2:36:13.34:0,13,805	0/0:36,0:37:93.12:0,93,1086	0/0:5,0:5:9.03:0,9,107
chr10	84001566	.	GCTCGCTCTCT	G	1770.82	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=3.817;DP=524;FS=2.148;HRun=0;HaplotypeScore=150.4146;InbreedingCoeff=0.6447;MQ=71.86;MQ0=18;MQRankSum=0.532;QD=9.73;ReadPosRankSum=-0.219;VQSLOD=2.6289;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:29.93:243,30,0	1/1:7,0:6:11.99:101,12,0	0/0:27,0:19:23.49:0,23,328	0/0:37,0:17:15.39:0,15,183	0/0:15,0:15:1.07:0,1,133	0/0:21,0:21:43.98:0,44,390	1/1:23,0:22:35.97:304,36,0	0/0:33,0:32:72.12:0,72,542	0/0:19,0:19:36.25:0,36,340	1/1:19,0:20:53.97:468,54,0	1/1:10,0:9:14.98:125,15,0	0/0:19,0:18:36.62:0,37,491	0/0:13,0:13:29.93:0,30,342	0/0:13,0:13:35.80:0,36,397	0/1:19,0:19:50.32:50,0,230	1/1:19,1:21:44.93:452,45,0	1/1:1,14:15:3.01:98,3,0	0/0:7,0:6:17.19:0,17,111	0/0:18,0:16:38.30:0,38,338	0/0:9,0:9:18.35:0,18,109	0/0:30,0:28:59.20:0,59,494	0/0:17,0:17:35.78:0,36,377	0/0:23,0:23:50.35:0,50,384	0/0:23,0:21:47.47:0,47,783	0/0:15,0:15:29.82:0,30,228	0/1:25,0:25:89.36:89,0,294	0/1:24,0:22:31.93:32,0,118	0/0:3,0:1:2.96:0,3,19
chr10	84001568	.	TCG	T	1463.64	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=3.244;DP=527;FS=2.767;HRun=0;HaplotypeScore=88.5922;InbreedingCoeff=0.8513;MQ=69.67;MQ0=20;MQRankSum=1.769;QD=12.95;ReadPosRankSum=-2.157;VQSLOD=3.2508;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:29.93:244,30,0	1/1:8,0:7:11.99:101,12,0	0/0:25,0:17:17.42:0,17,322	0/0:37,0:17:19.49:0,19,195	0/0:15,0:15:1.35:0,1,133	0/0:20,0:20:39.30:0,39,271	1/1:19,0:18:35.97:304,36,0	0/0:32,0:31:71:0,71,539	0/0:20,0:20:35.73:0,36,271	1/1:3,19:22:54.86:471,55,0	1/1:10,0:9:14.98:125,15,0	0/0:20,0:19:12:0,12,177	0/0:14,0:14:18.09:0,18,156	0/0:13,0:13:28.98:0,29,194	0/0:19,0:19:51.24:0,51,291	1/1:21,0:21:44.79:382,45,0	1/1:15,0:15:2.99:24,3,0	0/0:7,0:6:17.19:0,17,111	0/0:18,0:16:38.63:0,39,271	0/0:9,0:9:18.08:0,18,108	0/0:31,0:28:59.13:0,59,413	0/0:21,0:20:4.54:0,5,183	0/0:26,0:26:34:0,34,310	0/0:23,0:21:45.67:0,46,346	0/0:15,0:15:29.82:0,30,228	0/0:22,2:24:15.10:0,15,316	0/0:22,0:20:22.41:0,22,142	0/0:3,0:1:2.96:0,3,19
chr10	84001570	.	GCTCTCTCTCTCTCTCTCTCT	G	616.65	PASS	AB=1.000;AC=8;AF=0.190;AN=42;BaseQRankSum=3.625;DP=543;FS=6.585;HRun=0;HaplotypeScore=235.6191;InbreedingCoeff=0.3601;MQ=66.03;MQ0=21;MQRankSum=-1.441;QD=5.32;ReadPosRankSum=1.073;VQSLOD=1.5297;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:0.47:0,0,1	./.	./.	0/0:34,0:14:1.55:0,2,4	0/0:15,0:15:6.02:0,6,311	0/0:20,0:20:9.03:0,9,510	1/1:19,0:18:0.47:1,0,0	0/1:31,0:30:3.20:14,0,3	0/0:22,0:22:6.54:0,7,280	0/0:24,0:24:15.52:0,16,414	./.	0/0:22,0:20:16.30:0,16,1036	0/0:15,0:15:20.09:0,20,902	0/0:15,0:15:15.52:0,16,746	1/1:20,0:20:6.02:279,6,0	0/0:22,0:22:9.50:0,10,278	0/0:15,0:15:6.02:0,6,188	./.	0/0:18,0:16:6.07:0,6,187	./.	0/0:30,0:27:6.02:0,6,245	0/0:22,0:21:6.49:0,6,438	0/0:26,0:26:3.01:0,3,212	0/0:25,0:23:24.08:0,24,1640	./.	0/1:24,0:24:42.76:270,0,43	1/1:12,10:20:3.49:160,3,0	./.
chr10	84002524	.	TTGTGTGTGTGTGTGTG	T	1768.99	PASS	AB=0.783;AC=9;AF=0.173;AN=52;BaseQRankSum=4.342;DP=579;FS=0.000;HRun=0;HaplotypeScore=213.0760;InbreedingCoeff=0.7638;MQ=56.02;MQ0=20;MQRankSum=-2.777;QD=18.62;ReadPosRankSum=1.329;VQSLOD=2.3903;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:14.43:0,14,313	1/1:8,0:8:2.67:11,3,0	./.	./.	0/0:19,0:18:6.02:0,6,451	0/0:18,0:17:12.04:0,12,675	0/0:15,0:18:15.05:0,15,473	0/0:19,0:19:15.52:0,16,463	0/0:22,0:20:24.05:0,24,1178	1/1:18,0:18:8.37:188,8,0	0/1:13,5:18:1.78:148,0,2	0/0:30,0:30:27.02:0,27,1521	0/0:25,0:25:41.25:0,41,2168	0/0:32,0:35:54.17:0,54,3385	0/0:17,0:25:21.07:0,21,503	1/1:13,11:24:24.08:1047,24,0	1/1:23,2:26:17.70:520,18,0	0/0:9,0:8:15.05:0,15,441	0/0:16,0:15:11.58:0,12,236	0/0:14,0:14:14.18:0,14,496	0/0:20,0:20:6.02:0,6,180	0/0:17,0:17:27.08:0,27,1333	0/0:17,0:17:24.08:0,24,1537	0/0:40,0:39:60.08:0,60,3267	0/0:16,0:16:30.10:0,30,838	0/0:15,0:19:27.09:0,27,1427	0/0:23,0:28:33.54:0,34,784	0/0:5,0:4:12.04:0,12,593
chr10	84002745	.	TTC	T	303.33	PASS	AB=0.939;AC=11;AF=0.212;AN=52;BaseQRankSum=1.945;DP=639;FS=0.000;HRun=0;HaplotypeScore=95.3388;InbreedingCoeff=0.0802;MQ=64.77;MQ0=8;MQRankSum=1.349;QD=1.43;ReadPosRankSum=-0.975;VQSLOD=1.7593;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:24:0,24,246	0/0:8,0:7:2.99:0,3,24	./.	./.	0/0:20,0:20:2.97:0,3,20	0/0:23,0:23:16.11:0,16,269	0/0:19,0:18:5.59:0,6,49	0/0:43,0:43:16.14:0,16,120	0/1:22,2:25:99:103,0,230	0/1:30,1:31:23.11:41,0,23	0/0:13,0:13:1.55:0,2,4	0/1:22,1:24:34.49:34,0,77	0/0:12,0:12:1.83:0,2,23	0/1:20,0:20:10.44:10,0,96	0/0:24,0:24:8.98:0,9,73	1/1:10,8:19:11.86:110,12,0	0/1:19,2:23:2.09:115,0,2	0/0:15,0:15:13.20:0,13,98	0/0:19,0:19:21:0,21,208	0/0:16,0:16:3.01:0,3,39	0/0:29,0:29:18.02:0,18,194	1/1:20,0:25:2.70:8,3,0	0/1:12,0:12:9.97:10,0,113	0/1:31,0:32:6.62:7,0,194	0/0:24,0:23:6.01:0,6,70	0/0:25,0:31:33.05:0,33,366	0/0:26,0:32:24.38:0,24,213	0/0:16,0:14:8.98:0,9,73
chr10	84003119	.	AAC	A	359.95	PASS	AB=0.853;AC=4;AF=0.071;AN=56;BaseQRankSum=3.700;DP=434;FS=14.308;HRun=0;HaplotypeScore=58.5630;InbreedingCoeff=0.3322;MQ=56.71;MQ0=20;MQRankSum=0.454;QD=7.66;ReadPosRankSum=0.720;VQSLOD=1.8657;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:43.46:47,0,43	0/0:2,0:2:5.95:0,6,59	0/0:33,0:8:12.12:0,12,132	0/0:24,0:7:12.44:0,12,70	0/0:17,0:15:34.23:0,34,265	0/0:13,0:12:32.76:0,33,365	0/0:20,0:17:24.56:0,25,321	0/0:22,0:19:47.42:0,47,343	0/0:9,0:9:21.09:0,21,231	0/0:14,0:11:29.36:0,29,290	0/0:13,0:12:15.52:0,16,192	0/0:12,0:12:26.42:0,26,268	0/0:10,0:10:28.82:0,29,292	0/0:16,0:16:39.98:0,40,388	1/1:3,9:12:20.72:209,21,0	0/0:17,0:14:21.41:0,21,250	0/0:39,0:35:60.64:0,61,597	0/1:7,4:12:16.13:217,0,16	0/0:17,0:14:24.49:0,24,224	0/0:9,0:9:22.32:0,22,183	0/0:12,0:9:12.41:0,12,88	0/0:6,0:6:18.02:0,18,261	0/0:10,0:10:26.99:0,27,318	0/0:18,1:19:44.91:0,45,577	0/0:9,0:8:5.67:0,6,60	0/0:16,0:16:24.40:0,24,208	0/0:21,0:20:47:0,47,318	0/0:6,0:6:0.36:0,0,55
chr10	84003164	.	TAGCAAGCGCA	T	497.89	PASS	AB=0.607;AC=1;AF=0.020;AN=50;BaseQRankSum=5.213;DP=257;FS=4.849;HRun=0;HaplotypeScore=62.4346;InbreedingCoeff=-0.0599;MQ=42.98;MQ0=40;MQRankSum=-4.142;QD=29.29;ReadPosRankSum=-0.597;VQSLOD=1.8857;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,11:14:93.38:571,0,93	0/0:5,0:5:9.03:0,9,406	./.	./.	0/0:8,0:6:12.04:0,12,445	0/0:10,0:8:21.03:0,21,930	0/0:18,0:11:24.08:0,24,1278	0/0:5,0:3:2.90:0,3,16	0/0:8,0:7:21.07:0,21,1116	0/0:6,0:5:15.05:0,15,797	0/0:5,0:4:8.99:0,9,337	0/0:7,0:7:17.99:0,18,938	0/0:7,0:6:18.03:0,18,818	0/0:11,0:11:30.10:0,30,1419	0/0:5,0:5:2.74:0,3,160	0/0:10,0:7:9.03:0,9,480	0/0:35,0:29:78.22:0,78,3856	0/0:18,0:18:48.01:0,48,2260	0/0:19,0:7:21.05:0,21,967	0/0:8,0:6:18.06:0,18,836	./.	0/0:4,0:3:3.01:0,3,159	0/0:5,0:5:6.02:0,6,319	0/0:11,0:10:30.10:0,30,1588	0/0:5,0:4:4.57:0,5,154	0/0:7,0:5:12.03:0,12,503	0/0:8,0:6:15.05:0,15,697	0/0:3,0:2:6.02:0,6,298
chr10	84003181	.	TG	T	346.58	PASS	AB=0.583;AC=1;AF=0.019;AN=52;BaseQRankSum=5.443;DP=398;FS=1.126;HRun=3;HaplotypeScore=46.7641;InbreedingCoeff=0.3762;MQ=42.21;MQ0=48;MQRankSum=-4.728;QD=16.50;ReadPosRankSum=0.063;VQSLOD=3.0816;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,15:18:1.07:421,0,1	0/0:8,0:7:12.04:0,12,173	./.	./.	0/0:15,0:12:27.09:0,27,387	0/0:11,0:9:23.99:0,24,317	0/0:24,0:14:33.11:0,33,472	0/0:14,0:9:21.04:0,21,279	0/0:9,0:8:24.08:0,24,345	0/0:10,0:9:24.07:0,24,327	0/0:14,0:13:26.90:0,27,326	0/0:14,0:14:35.95:0,36,495	0/0:14,0:13:36.12:0,36,517	0/0:11,0:11:30.10:0,30,431	0/0:11,0:10:17.89:0,18,258	0/0:11,0:8:15.05:0,15,216	0/0:50,0:45:99:0,123,1748	0/0:20,0:20:48.16:0,48,691	0/0:15,0:7:18.06:0,18,255	0/0:17,0:13:26.94:0,27,330	0/0:10,0:3:3.01:0,3,43	0/0:9,0:8:14.94:0,15,188	0/0:7,0:7:12.04:0,12,172	0/0:20,0:19:53.97:0,54,751	0/0:15,0:9:12.04:0,12,172	0/0:18,0:14:36.12:0,36,514	0/0:18,0:13:30.10:0,30,430	0/0:4,0:3:9.03:0,9,130
chr10	84003206	.	AAAAAC	A	271.41	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=2.678;DP=438;FS=1.506;HRun=0;HaplotypeScore=71.5722;InbreedingCoeff=0.6240;MQ=44.66;MQ0=36;MQRankSum=-0.666;QD=9.05;ReadPosRankSum=1.463;VQSLOD=2.0696;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:18.06:0,18,371	0/0:4,0:3:5.99:0,6,100	./.	0/0:15,0:2:3.01:0,3,76	0/0:21,0:19:42.12:0,42,1054	0/0:11,0:11:18.06:0,18,434	0/0:23,0:16:11.96:0,12,235	0/0:17,0:9:12.04:0,12,309	0/0:8,0:7:6.02:0,6,167	0/0:11,0:11:24.08:0,24,554	0/0:11,0:11:21.07:0,21,581	0/0:16,0:16:24.07:0,24,535	0/0:12,0:11:21.05:0,21,466	0/0:13,0:13:21.07:0,21,563	1/1:5,3:7:3.01:54,3,0	0/0:11,0:8:12.04:0,12,333	0/0:49,0:46:78.22:0,78,1975	1/1:10,12:22:18.06:323,18,0	0/0:24,0:19:16.30:0,16,364	0/0:15,0:14:21.07:0,21,410	0/0:9,0:7:11.97:0,12,248	0/0:7,0:6:12.04:0,12,334	0/0:10,0:10:21.07:0,21,565	0/0:24,0:23:48.16:0,48,1335	0/0:12,0:11:9.03:0,9,134	0/0:24,0:20:36.12:0,36,942	0/0:20,0:14:21.04:0,21,409	0/0:5,0:4:9.03:0,9,250
chr10	84004058	.	GATAT	G	1905.34	PASS	AB=1.000;AC=19;AF=0.500;AN=38;BaseQRankSum=0.857;DP=190;FS=2.159;HRun=0;HaplotypeScore=47.0013;InbreedingCoeff=0.6582;MQ=75.20;MQ0=6;MQRankSum=-1.837;QD=16.71;ReadPosRankSum=1.589;VQSLOD=3.1789;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:2.99:0,3,23	./.	0/0:8,0:5:4.56:0,5,32	0/0:15,0:9:7:0,7,79	0/0:2,0:2:3.01:0,3,73	0/0:4,0:4:6.02:0,6,147	./.	1/1:12,18:36:56.52:904,57,0	./.	./.	./.	0/0:2,0:2:3.01:0,3,73	0/0:3,0:3:3.01:0,3,73	0/0:6,0:7:11.78:0,12,232	1/1:1,0:4:9.01:84,9,0	./.	0/0:10,0:10:15.05:0,15,224	1/1:7,0:16:18.49:168,18,0	1/1:5,3:10:5.34:190,5,0	1/1:8,2:10:6.02:89,6,0	./.	./.	0/1:2,0:2:0:0,0,0	./.	1/1:3,0:6:6.01:56,6,0	1/1:12,0:12:15.02:139,15,0	1/1:3,4:11:24.05:309,24,0	1/1:6,0:6:12.01:111,12,0
chr10	84004072	.	TATATATATATA	T	1205	PASS	AB=1.000;AC=9;AF=0.205;AN=44;BaseQRankSum=3.210;DP=152;FS=0.000;HRun=0;HaplotypeScore=71.5445;InbreedingCoeff=0.5256;MQ=76.12;MQ0=7;MQRankSum=-4.254;QD=37.66;ReadPosRankSum=2.293;VQSLOD=3.0468;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:15.05:0,15,322	./.	0/0:10,0:5:12.03:0,12,147	0/0:23,0:8:13.40:0,13,247	0/0:1,0:1:3.01:0,3,177	0/0:2,0:2:6.02:0,6,354	0/0:4,0:4:9:0,9,82	0/0:33,0:33:86.30:0,86,2136	./.	0/0:1,0:1:3.01:0,3,56	0/0:1,0:1:3.01:0,3,92	0/0:1,0:1:3.01:0,3,177	0/0:2,0:2:6.01:0,6,201	0/0:5,0:5:15.05:0,15,680	1/1:3,0:3:9.03:138,9,0	./.	0/0:8,0:8:15.05:0,15,680	0/1:14,0:13:70.08:284,0,70	0/0:6,0:6:18.06:0,18,452	0/0:4,0:4:12.04:0,12,220	./.	./.	1/1:1,0:1:0.47:1,0,0	./.	0/0:4,0:4:9.03:0,9,117	1/1:4,5:9:26.87:543,27,0	0/0:8,0:8:24.08:0,24,442	1/1:1,4:5:15.04:368,15,0
chr10	84004393	.	AT	A	3545.39	PASS	AB=0.950;AC=21;AF=0.375;AN=56;BaseQRankSum=1.797;DP=547;FS=7.168;HRun=11;HaplotypeScore=100.6276;InbreedingCoeff=0.8012;MQ=71.30;MQ0=1;MQRankSum=-4.322;QD=14.83;ReadPosRankSum=0.940;VQSLOD=3.6400;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:94.10:0,94,589	0/0:3,0:3:6.01:0,6,58	0/1:14,1:13:4.03:4,0,130	0/1:16,0:13:0.28:0,0,113	0/0:13,0:13:3.54:0,4,224	0/0:15,0:15:39.10:0,39,415	0/0:23,2:25:19.84:0,20,599	1/1:5,27:34:24:584,24,0	0/0:25,0:25:60.12:0,60,622	0/0:19,0:20:41.86:0,42,397	0/1:9,1:10:5.71:6,0,142	0/0:27,2:30:25.73:0,26,655	0/0:22,0:23:59.90:0,60,586	0/0:31,0:31:80.92:0,81,829	1/1:6,28:34:76.91:621,77,0	0/0:23,0:23:54.12:0,54,568	0/0:19,1:21:23.30:0,23,432	1/1:2,15:17:44.95:369,45,0	1/1:8,19:27:56.82:450,57,0	1/1:2,8:10:26.95:219,27,0	1/1:8,18:27:43.85:345,44,0	0/0:6,0:6:18.03:0,18,179	0/0:11,0:11:24.06:0,24,256	0/0:11,0:11:27.05:0,27,279	0/0:7,0:10:23.33:0,23,153	1/1:7,15:22:47.89:388,48,0	1/1:6,13:19:47.89:387,48,0	1/1:0,7:7:20.98:172,21,0
chr10	84004404	.	T	TC	932.50	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.052;DP=558;FS=0.000;HRun=3;HaplotypeScore=102.3318;InbreedingCoeff=0.5436;MQ=70.99;MQ0=3;MQRankSum=-1.590;QD=18.28;ReadPosRankSum=1.251;VQSLOD=3.1644;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,37:41:89.73:1026,90,0	0/0:4,0:4:5.98:0,6,55	0/0:17,0:11:1.62:0,2,145	0/0:16,0:14:15.69:0,16,167	0/0:11,0:11:26.95:0,27,268	0/0:19,0:19:56.90:0,57,571	0/0:26,0:26:63:0,63,694	0/0:35,0:35:96.86:0,97,638	0/0:23,0:23:66.15:0,66,744	0/0:21,0:21:55.67:0,56,548	0/0:11,0:11:23.87:0,24,225	0/0:28,0:28:68.28:0,68,834	0/0:25,0:25:64.52:0,65,704	0/0:30,0:30:89.88:0,90,966	0/0:34,0:34:87.80:0,88,529	0/0:19,0:19:54.09:0,54,604	0/0:23,0:23:48.90:0,49,565	0/0:16,0:16:46.82:0,47,278	0/0:21,0:21:46.73:0,47,281	0/0:10,0:10:26.32:0,26,155	0/0:27,0:27:67.21:0,67,411	0/0:13,0:13:32.99:0,33,308	0/0:12,0:12:36:0,36,372	0/0:16,0:16:44.91:0,45,431	0/1:10,0:10:7.26:7,0,79	0/0:21,0:21:55.85:0,56,368	0/0:21,0:21:49.88:0,50,307	0/0:7,0:7:20.34:0,20,115
chr10	84007902	.	G	GA	2567.59	PASS	AB=0.929;AC=11;AF=0.196;AN=56;BaseQRankSum=-7.687;DP=577;FS=4.870;HRun=8;HaplotypeScore=67.3878;InbreedingCoeff=0.9106;MQ=72.48;MQ0=0;MQRankSum=1.692;QD=21.22;ReadPosRankSum=-2.927;VQSLOD=2.8922;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,111,979	0/0:5,0:5:12:0,12,110	0/0:11,0:11:21:0,21,192	0/1:12,0:12:3.59:4,0,123	0/0:20,0:20:42.01:0,42,384	0/0:18,0:18:40.94:0,41,350	0/0:22,0:22:50.98:0,51,461	1/1:7,24:31:75.11:813,75,0	0/0:11,0:11:27.01:0,27,247	0/0:20,0:20:56.82:0,57,504	0/0:16,0:16:42.02:0,42,383	0/0:29,0:29:81.04:0,81,741	0/0:30,0:30:81.03:0,81,741	0/0:25,0:25:69.03:0,69,630	0/0:37,0:37:90.01:0,90,824	0/0:25,0:25:63.03:0,63,576	0/0:33,0:33:87.04:0,87,796	0/0:15,0:15:36:0,36,329	1/1:4,17:21:54.11:607,54,0	1/1:5,10:15:27.04:297,27,0	1/1:3,13:16:30.05:331,30,0	0/0:25,0:26:62.52:0,63,548	0/0:22,0:22:47.43:0,47,437	0/0:10,0:10:30.02:0,30,275	0/0:11,0:11:33.02:0,33,302	0/0:22,0:22:51:0,51,467	1/1:4,21:25:60.12:692,60,0	0/0:7,0:7:21.01:0,21,192
chr10	84008019	.	GC	G	1236.11	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.831;DP=605;FS=10.503;HRun=4;HaplotypeScore=59.1821;InbreedingCoeff=0.9802;MQ=87.20;MQ0=0;MQRankSum=-4.137;QD=31.70;ReadPosRankSum=0.176;VQSLOD=3.4544;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:99:1331,111,0	0/0:8,0:8:21.06:0,21,278	0/0:22,0:22:60.15:0,60,804	0/0:23,0:23:60.40:0,60,766	0/0:15,0:15:45.15:0,45,627	0/0:25,0:25:75.25:0,75,1049	0/0:25,0:25:75.21:0,75,993	0/0:31,0:31:84.25:0,84,1117	0/0:18,0:18:48.15:0,48,655	0/0:15,0:15:45.14:0,45,601	0/0:19,0:19:57.19:0,57,797	0/0:24,0:24:66.22:0,66,920	0/0:28,0:28:81.26:0,81,1116	0/0:15,0:15:42.14:0,42,587	0/0:29,0:29:84.25:0,84,1141	0/0:28,0:28:84.28:0,84,1176	0/0:45,0:45:99:0,132,1772	0/0:19,0:19:54.16:0,54,735	0/0:14,0:14:39.12:0,39,528	0/0:22,0:22:63.21:0,63,875	0/0:28,0:28:75.22:0,75,999	0/0:17,0:17:48.16:0,48,670	0/0:19,0:19:57.19:0,57,791	0/0:16,0:16:45.15:0,45,630	0/0:12,0:12:33.11:0,33,460	0/0:18,0:18:54.17:0,54,739	0/0:26,0:26:78.26:0,78,1090	0/0:5,0:5:15.05:0,15,210
chr10	84009532	.	T	TAGAG	21298.55	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-4.063;DP=802;FS=4.478;HRun=0;HaplotypeScore=127.6512;InbreedingCoeff=0.9977;MQ=86.91;MQ0=0;MQRankSum=-7.685;QD=63.58;ReadPosRankSum=3.346;VQSLOD=7.1495;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,41:45:96.33:2576,96,0	1/1:0,12:12:33.03:826,33,0	0/0:36,0:36:86.44:0,86,1606	0/0:23,0:23:46.04:0,46,1015	0/0:27,0:27:78.25:0,78,1447	0/0:21,0:21:60.21:0,60,1138	1/1:7,23:30:60.26:2001,60,0	0/0:35,0:35:93.30:0,93,1695	0/0:24,0:24:69.21:0,69,1244	1/1:9,28:40:99:2426,102,0	1/1:0,23:24:51.18:1372,51,0	0/0:38,0:38:99:0,114,2027	0/0:39,0:39:99:0,99,1801	0/0:32,0:32:87.30:0,87,1640	1/1:6,29:36:75.26:2019,75,0	1/1:4,32:36:96.33:2543,96,0	1/1:2,21:23:57.20:1522,57,0	1/1:2,21:23:52.12:1529,52,0	0/0:24,0:24:72.22:0,72,1254	0/0:24,0:24:69.18:0,69,1181	0/0:30,0:30:87.28:0,87,1607	0/0:28,0:28:72.23:0,72,1314	0/0:22,0:22:60.18:0,60,1058	0/0:36,0:36:99:0,108,1950	1/1:0,21:22:45.15:1211,45,0	1/1:3,33:38:99:2867,114,0	0/0:28,0:28:84.24:0,84,1557	1/1:0,6:6:15.05:405,15,0
chr10	84010151	.	GT	G	6471.38	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=13.608;DP=667;FS=10.134;HRun=8;HaplotypeScore=66.2397;InbreedingCoeff=0.9966;MQ=67.18;MQ0=4;MQRankSum=-0.301;QD=23.03;ReadPosRankSum=2.543;VQSLOD=5.2466;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:31:72.11:695,72,0	1/1:3,10:13:27.04:261,27,0	0/0:31,0:21:15.57:0,16,392	0/0:34,0:21:21.50:0,21,275	0/0:36,0:36:99:0,99,1161	0/0:22,0:22:57.17:0,57,689	1/1:1,15:16:36.06:348,36,0	0/0:31,0:31:78.19:0,78,892	0/0:18,0:18:48.10:0,48,544	1/1:5,26:31:81.11:776,81,0	1/1:0,23:23:62.59:589,63,0	0/0:19,0:19:48.13:0,48,560	0/0:30,0:30:84.26:0,84,1013	0/0:23,0:23:63.19:0,63,761	1/1:3,24:27:57.09:550,57,0	1/1:4,22:26:60.09:579,60,0	1/1:1,23:24:66.11:637,66,0	1/1:6,26:32:39.21:529,39,0	0/0:20,0:19:41.92:0,42,492	0/0:25,0:25:66.19:0,66,784	0/0:7,0:7:21.06:0,21,254	0/0:17,0:17:39.12:0,39,470	0/0:21,0:21:60.16:0,60,704	0/0:18,0:18:48.15:0,48,579	1/1:1,29:30:75.12:724,75,0	1/1:1,18:19:54.09:521,54,0	0/0:34,0:34:93.28:0,93,1121	1/1:0,9:9:27.04:261,27,0
chr10	84010486	.	T	TACACAC	5038.62	PASS	AB=0.971;AC=31;AF=0.574;AN=54;BaseQRankSum=5.327;DP=831;FS=8.029;HRun=0;HaplotypeScore=230.9318;InbreedingCoeff=0.7962;MQ=52.12;MQ0=8;MQRankSum=-8.834;QD=10.35;ReadPosRankSum=-6.340;VQSLOD=1.1474;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:43,0:40:5.90:186,6,0	1/1:11,0:13:8.75:119,9,0	0/1:33,0:15:31.75:32,0,44	0/0:43,0:18:9.03:0,9,130	0/0:23,0:23:36.09:0,36,667	0/0:28,0:29:48.13:0,48,850	1/1:40,0:38:18.53:403,19,0	1/1:34,0:34:29.90:509,30,0	0/0:31,0:31:29.46:0,29,932	1/1:28,0:28:39.03:698,39,0	1/1:20,0:21:2.61:35,3,0	0/0:30,0:32:63.22:0,63,1282	0/0:31,0:32:66.20:0,66,1303	0/0:38,0:39:81.22:0,81,1533	1/1:35,0:46:18.06:362,18,0	1/1:33,1:39:14.91:249,15,0	1/1:24,0:24:13.60:275,14,0	1/1:14,0:14:9.02:146,9,0	1/1:19,3:21:17.04:340,17,0	1/1:8,2:14:6.02:77,6,0	1/1:27,0:43:5.61:76,6,0	0/0:26,0:27:45.15:0,45,898	0/0:17,0:18:4.24:0,4,376	0/0:41,0:46:87.26:0,87,1677	0/0:18,0:18:33.58:0,34,683	1/1:38,0:37:45.12:823,45,0	1/1:14,11:30:24.51:709,25,0	./.
chr10	84012361	.	TA	T	828.06	PASS	AB=0.656;AC=12;AF=0.214;AN=56;BaseQRankSum=3.592;DP=499;FS=6.600;HRun=15;HaplotypeScore=65.7207;InbreedingCoeff=0.2461;MQ=63.92;MQ0=1;MQRankSum=2.526;QD=5.18;ReadPosRankSum=2.913;VQSLOD=2.2399;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:26:17.27:0,17,94	1/1:4,0:5:4.97:25,5,0	0/0:19,0:11:11.98:0,12,97	0/0:9,0:5:2.50:0,2,9	0/0:22,3:25:3.95:0,4,254	0/0:14,0:14:20.94:0,21,172	0/0:17,0:20:35.66:0,36,288	0/0:27,0:25:33.43:0,33,278	0/0:19,0:19:26.98:0,27,233	0/1:10,11:21:26.34:105,0,26	0/1:9,12:22:0.39:174,0,0	0/0:19,0:19:26.71:0,27,214	0/0:21,1:22:28.70:0,29,366	0/0:22,0:22:44.84:0,45,369	1/1:6,9:17:7.15:153,7,0	0/1:7,7:17:2.59:90,0,3	0/1:11,14:26:27.09:95,0,27	0/1:6,10:16:2.68:111,0,3	0/0:8,0:7:5.93:0,6,41	0/0:25,2:27:16.62:0,17,368	0/0:19,0:19:32.80:0,33,258	0/0:17,0:17:29.85:0,30,239	0/0:16,1:19:2:0,2,223	0/0:6,1:7:12.80:0,13,92	0/1:12,3:15:41.11:41,0,164	0/1:7,7:14:2.84:106,0,3	0/0:18,1:20:5.56:0,6,128	0/1:2,4:7:6.71:75,0,7
chr10	84012457	.	TC	T	67.29	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=3.109;DP=401;FS=0.000;HRun=2;HaplotypeScore=49.9512;InbreedingCoeff=0.6944;MQ=42.90;MQ0=34;MQRankSum=-3.119;QD=8.41;ReadPosRankSum=1.878;VQSLOD=1.0784;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:16.13:0,16,347	0/0:6,0:5:15.05:0,15,208	0/0:1,0:1:2.68:0,3,11	./.	0/0:27,0:27:48.01:0,48,578	0/0:20,0:17:42.11:0,42,554	0/0:21,0:18:20.94:0,21,424	0/0:17,0:14:29.80:0,30,273	0/0:16,0:16:33.03:0,33,424	0/0:16,0:15:35.82:0,36,420	0/0:13,0:13:27.08:0,27,364	0/0:13,0:12:21:0,21,209	0/0:10,0:10:10.48:0,10,188	0/0:19,0:17:36.12:0,36,507	0/0:11,0:11:18.02:0,18,174	0/0:20,0:19:44.78:0,45,488	0/0:30,0:26:54.09:0,54,686	0/0:11,0:8:14.93:0,15,118	0/0:12,0:9:26.96:0,27,295	0/0:6,0:6:12.04:0,12,167	0/0:8,0:6:15.04:0,15,193	0/0:9,0:8:24.08:0,24,332	0/0:14,0:13:29.98:0,30,325	0/0:22,0:20:30.09:0,30,406	1/1:2,6:7:12.04:153,12,0	0/0:11,0:9:23.92:0,24,213	0/0:23,0:23:59.93:0,60,741	0/0:10,0:3:8.99:0,9,77
chr10	84013256	.	T	TA	2160.26	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=5.567;DP=453;FS=4.387;HRun=9;HaplotypeScore=61.1908;InbreedingCoeff=0.6532;MQ=61.11;MQ0=18;MQRankSum=-1.723;QD=11.25;ReadPosRankSum=0.102;VQSLOD=2.6898;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:59.99:0,60,520	1/1:9,1:10:20.63:200,21,0	0/0:29,0:6:8.91:0,9,69	0/1:34,0:12:12.15:12,0,47	0/0:33,0:33:74.96:0,75,651	0/0:14,0:14:35.98:0,36,312	0/0:7,0:7:14.99:0,15,130	0/0:28,0:26:56.94:0,57,488	0/0:4,0:4:12:0,12,104	1/1:11,9:19:36.38:435,36,0	1/1:5,7:12:30.08:330,30,0	0/0:11,0:11:29.49:0,29,243	0/0:8,0:8:14.99:0,15,130	0/0:14,0:14:32.71:0,33,280	0/1:17,0:17:0.77:22,0,1	1/1:10,4:15:9.89:311,10,0	1/1:20,12:32:90.15:951,90,0	1/1:16,0:16:9.34:59,9,0	0/0:19,0:18:44.97:0,45,386	0/0:19,0:19:41.93:0,42,357	0/0:4,0:3:6:0,6,52	0/0:3,0:3:2.99:0,3,26	0/0:8,0:8:17.94:0,18,148	0/0:7,0:7:11.99:0,12,104	0/0:14,0:14:38.92:0,39,324	0/1:20,0:20:23.40:23,0,60	0/0:16,0:13:35.97:0,36,309	0/1:16,0:14:0.13:0,0,35
chr10	84013272	.	TA	T	1275.81	PASS	AB=0.907;AC=14;AF=0.250;AN=56;BaseQRankSum=5.810;DP=420;FS=9.523;HRun=11;HaplotypeScore=59.3881;InbreedingCoeff=0.6791;MQ=60.05;MQ0=14;MQRankSum=-1.578;QD=10.29;ReadPosRankSum=1.909;VQSLOD=2.0078;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:30:71.50:0,72,725	1/1:7,2:9:6.48:154,6,0	0/0:29,0:6:8.64:0,9,77	0/1:29,2:11:9.32:9,0,52	0/0:26,0:26:63.15:0,63,664	0/0:13,0:13:39.09:0,39,409	1/1:1,7:8:17.98:148,18,0	0/0:25,0:24:48.11:0,48,502	0/0:3,0:3:2.96:0,3,19	1/1:10,8:17:38.87:310,39,0	1/1:7,3:10:14.96:122,15,0	0/0:11,1:12:2.40:0,2,219	0/0:5,0:5:9.02:0,9,95	0/0:14,0:14:39.09:0,39,409	0/0:13,0:13:27.94:0,28,197	1/1:8,2:10:20.93:169,21,0	1/1:24,7:31:65.75:532,66,0	0/0:12,0:12:22.86:0,23,155	0/0:22,0:21:45.11:0,45,479	0/0:16,0:16:30.08:0,30,320	0/0:6,0:5:9:0,9,83	0/0:2,0:2:3.01:0,3,32	0/1:6,1:7:12.59:13,0,83	0/0:6,0:6:12.03:0,12,128	0/0:11,0:11:27.06:0,27,282	0/0:7,0:23:30.44:0,30,164	0/0:14,0:12:27.07:0,27,287	0/0:10,0:12:21.06:0,21,138
chr10	84013464	.	TAC	T	231.46	PASS	AB=0.882;AC=11;AF=0.212;AN=52;BaseQRankSum=4.868;DP=643;FS=5.479;HRun=0;HaplotypeScore=91.1809;InbreedingCoeff=0.0788;MQ=58.18;MQ0=13;MQRankSum=-0.861;QD=1.15;ReadPosRankSum=0.581;VQSLOD=1.1331;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:41:11.36:56,11,0	0/0:8,0:8:2.01:0,2,7	./.	./.	0/1:14,4:18:73.81:74,0,176	0/1:15,0:15:34.95:35,0,202	0/0:26,0:32:6:0,6,52	0/0:30,0:27:19.27:0,19,212	0/0:25,0:26:24.94:0,25,449	0/0:14,0:14:17.79:0,18,146	0/0:6,0:6:3.01:0,3,44	0/1:21,3:24:41.20:41,0,202	0/1:15,4:19:11.56:12,0,228	0/0:23,3:26:0.44:0,0,368	0/0:13,0:25:20.98:0,21,177	0/0:23,0:24:12.28:0,12,162	0/0:11,0:23:3:0,3,27	0/0:15,0:21:19.24:0,19,189	0/0:16,0:15:9.02:0,9,104	0/1:3,0:10:1:1,0,45	0/0:52,0:65:6.01:0,6,56	0/0:13,0:13:9.03:0,9,129	0/0:6,0:6:9.01:0,9,113	0/1:41,2:42:46.54:47,0,447	0/0:10,0:16:3:0,3,26	0/1:13,0:24:3.09:75,0,3	0/0:14,0:20:9:0,9,94	1/1:4,0:6:5.68:28,6,0
chr10	84014177	.	AC	A	2144.02	PASS	AB=0.563;AC=15;AF=0.278;AN=54;BaseQRankSum=0.658;DP=423;FS=11.086;HRun=10;HaplotypeScore=49.3567;InbreedingCoeff=0.6852;MQ=57.80;MQ0=13;MQRankSum=1.543;QD=11.40;ReadPosRankSum=4.684;VQSLOD=1.4651;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,30:39:52.52:532,53,0	./.	0/0:24,1:3:8.38:0,8,66	0/0:17,1:8:14.42:0,14,137	0/0:17,0:17:23.13:0,23,212	0/0:13,0:13:32.54:0,33,326	0/0:9,0:9:2.84:0,3,14	1/1:15,10:22:13.06:183,13,0	0/0:16,0:17:38.90:0,39,372	0/0:3,0:7:5.71:0,6,29	0/0:5,0:7:8.62:0,9,47	0/0:22,0:21:45.05:0,45,467	0/0:5,0:5:8.90:0,9,85	0/0:12,0:12:21.04:0,21,219	1/1:0,21:21:29.94:252,30,0	0/0:4,0:10:3.01:0,3,32	0/0:5,0:17:8.73:0,9,51	1/1:4,17:20:45.85:387,46,0	1/1:5,16:21:3.35:209,3,0	1/1:9,18:27:5.09:257,5,0	0/1:2,7:8:31.55:86,0,32	0/0:9,0:10:25.24:0,25,252	0/0:3,0:8:3.01:0,3,33	0/0:3,0:7:8.52:0,9,43	0/0:1,0:5:8.56:0,9,44	0/0:17,0:17:23.28:0,23,385	1/1:4,19:23:47.99:416,48,0	0/0:7,0:7:21.02:0,21,219
chr10	84014943	.	CCG	C	3175.10	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.120;DP=665;FS=5.013;HRun=0;HaplotypeScore=70.6707;InbreedingCoeff=0.9716;MQ=55.30;MQ0=53;MQRankSum=2.394;QD=37.35;ReadPosRankSum=1.595;VQSLOD=5.6315;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,2212	0/0:9,0:9:27.09:0,27,521	0/0:23,0:3:9.03:0,9,174	0/0:27,0:7:21.07:0,21,395	0/0:15,0:15:42.14:0,42,806	0/0:22,0:22:66.23:0,66,1252	0/0:37,0:35:99:0,105,1986	0/0:33,0:22:63.22:0,63,1192	0/0:15,0:15:42.14:0,42,806	0/0:30,0:30:78.27:0,78,1502	0/0:13,0:13:39.12:0,39,718	0/0:32,0:32:96.33:0,96,1849	0/0:24,0:24:69.22:0,69,1295	0/0:26,0:26:78.21:0,78,1443	1/1:0,30:30:72.24:1103,72,0	0/0:50,0:50:99:0,144,2703	0/0:40,0:40:99:0,114,2129	1/1:1,23:23:57.19:873,57,0	0/0:14,0:7:21.07:0,21,405	0/0:10,0:10:30.09:0,30,545	0/0:34,0:34:99:0,99,1887	0/0:18,0:18:54.17:0,54,999	0/0:8,0:8:21.07:0,21,405	0/0:24,0:24:69.24:0,69,1316	0/0:12,0:12:36.12:0,36,670	1/1:1,26:27:78.25:1173,78,0	0/0:23,0:23:69.24:0,69,1329	1/1:0,4:4:12.04:184,12,0
chr10	84015172	.	T	TC	2070.16	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-5.709;DP=514;FS=1.150;HRun=1;HaplotypeScore=44.9609;InbreedingCoeff=0.9409;MQ=59.63;MQ0=0;MQRankSum=0.881;QD=33.94;ReadPosRankSum=0.369;VQSLOD=3.1628;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:93.29:0,93,1189	0/0:7,0:7:21.06:0,21,259	0/0:11,0:1:2.96:0,3,19	0/0:12,0:6:14.95:0,15,119	0/0:12,0:12:33.09:0,33,412	0/0:20,0:20:54.15:0,54,670	0/0:19,0:19:45.14:0,45,571	0/0:24,0:24:63.17:0,63,768	0/0:12,0:12:30.10:0,30,389	0/0:17,0:17:50.95:0,51,624	0/0:7,0:7:18.06:0,18,233	0/0:26,0:26:75.21:0,75,942	0/0:21,0:21:54.11:0,54,653	0/0:24,0:24:69.21:0,69,880	1/1:1,17:18:42.03:564,42,0	0/0:20,0:20:60.16:0,60,737	0/0:37,0:37:99:0,111,1416	1/1:0,14:13:36.12:525,36,0	0/0:13,0:12:36.06:0,36,421	0/0:22,0:21:60.14:0,60,756	0/0:27,0:27:75.24:0,75,971	0/0:14,0:13:33.09:0,33,413	0/0:14,0:14:39.11:0,39,478	0/0:22,0:22:60.19:0,60,777	0/0:15,0:15:42.12:0,42,528	1/1:2,22:24:33.25:921,33,0	0/0:20,0:20:60.19:0,60,769	1/1:0,5:5:15.05:219,15,0
chr10	84015778	.	T	TA	5290.19	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=8.202;DP=559;FS=1.619;HRun=2;HaplotypeScore=81.2687;InbreedingCoeff=0.8445;MQ=70.69;MQ0=9;MQRankSum=-6.874;QD=20.19;ReadPosRankSum=-0.667;VQSLOD=4.6400;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:26:11.65:40,0,12	1/1:7,8:15:39.11:482,39,0	0/1:49,0:17:4.88:5,0,107	0/0:51,0:22:8.86:0,9,95	0/0:27,0:27:81.14:0,81,953	0/0:20,0:19:43.25:0,43,586	1/1:1,0:4:11.85:85,12,0	0/0:25,0:25:58.92:0,59,686	0/0:14,0:14:42.11:0,42,492	1/1:3,21:25:72.19:884,72,0	1/1:7,17:24:62.97:721,63,0	0/0:16,0:16:42.13:0,42,518	0/0:16,0:16:45.04:0,45,514	0/0:11,0:11:33.09:0,33,385	1/1:6,1:22:59.65:449,60,0	1/1:7,14:21:57.11:686,57,0	1/1:10,16:26:61.20:695,61,0	1/1:6,0:12:10.37:170,10,0	0/0:25,0:25:71.96:0,72,773	0/0:13,0:13:30.04:0,30,320	0/0:6,0:6:11.99:0,12,106	0/0:4,0:4:12.04:0,12,148	0/0:10,0:10:29.97:0,30,315	0/0:10,0:10:30.09:0,30,366	0/0:27,0:27:78.18:0,78,903	1/1:12,9:22:52.13:690,52,0	0/0:22,0:21:60.17:0,60,725	1/1:10,4:12:33.04:384,33,0
chr10	84015789	.	C	CT	1870.26	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=5.996;DP=543;FS=11.047;HRun=10;HaplotypeScore=95.8508;InbreedingCoeff=0.8459;MQ=68.95;MQ0=24;MQRankSum=-5.758;QD=17.16;ReadPosRankSum=-0.094;VQSLOD=3.0632;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:47.91:0,48,391	1/1:2,11:13:36.01:362,36,0	0/0:44,0:17:13.21:0,13,66	0/0:45,0:20:18.70:0,19,146	0/0:26,0:26:44.89:0,45,366	0/0:19,0:19:43.96:0,44,349	0/1:4,0:4:9.52:49,0,10	0/0:28,0:23:44.93:0,45,369	0/0:14,0:14:35.96:0,36,296	1/1:12,11:25:14.49:336,14,0	1/1:6,18:24:50.15:518,50,0	0/0:17,0:16:44.94:0,45,367	0/0:16,0:16:37.90:0,38,316	0/0:14,0:14:29.93:0,30,246	0/0:4,0:19:32.02:0,32,103	1/1:8,13:21:17.85:377,18,0	1/1:8,14:22:39.07:405,39,0	0/0:6,0:10:12.21:0,12,35	0/0:23,0:23:51.35:0,51,413	0/0:9,0:9:23.96:0,24,197	0/0:5,0:3:8.99:0,9,74	0/0:3,0:3:5.97:0,6,47	0/0:13,0:13:26.52:0,27,221	0/0:10,0:8:23.97:0,24,196	0/0:23,2:25:27.90:0,28,430	0/0:8,0:22:40.18:0,40,129	0/0:23,0:22:50.87:0,51,415	0/0:8,0:14:18.33:0,18,53
chr10	84015799	.	T	TA	478.75	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=7.748;DP=529;FS=11.317;HRun=3;HaplotypeScore=97.5030;InbreedingCoeff=0.4691;MQ=62.29;MQ0=37;MQRankSum=-4.128;QD=4.84;ReadPosRankSum=2.070;VQSLOD=-0.3980;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:21:45.14:0,45,535	1/1:14,0:14:7.71:82,8,0	0/0:40,1:13:0.98:0,1,66	0/0:39,0:16:6.82:0,7,147	0/0:22,0:21:48.05:0,48,528	0/0:20,0:19:42.04:0,42,481	1/1:1,5:6:9.03:117,9,0	0/0:30,0:23:59.99:0,60,633	0/0:15,0:15:42.01:0,42,466	0/1:20,0:20:62.45:66,0,62	1/1:23,0:23:23.82:169,24,0	0/0:19,0:18:45.09:0,45,520	0/0:22,0:22:43.53:0,44,451	0/0:13,0:13:38.98:0,39,415	0/0:19,0:18:43.78:0,44,255	0/1:18,0:18:45.86:96,0,46	0/1:18,0:18:15.23:96,0,15	0/0:10,0:7:20.41:0,20,116	0/0:23,0:23:59.88:0,60,633	0/0:14,0:14:38.87:0,39,382	0/0:6,0:3:9.03:0,9,107	0/0:3,0:3:3.01:0,3,36	0/0:12,0:13:32.95:0,33,357	0/0:11,0:9:24.07:0,24,284	0/0:24,0:24:53.08:0,53,638	0/0:26,0:25:63.66:0,64,363	0/0:20,0:19:54.08:0,54,612	0/0:13,0:11:26.28:0,26,150
chr10	84018051	.	G	GT	3431.75	PASS	AB=0.531;AC=7;AF=0.125;AN=56;BaseQRankSum=-11.750;DP=723;FS=3.832;HRun=3;HaplotypeScore=67.7911;InbreedingCoeff=0.8609;MQ=84.21;MQ0=0;MQRankSum=-1.090;QD=35.75;ReadPosRankSum=2.058;VQSLOD=4.4682;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1175	0/0:11,0:11:27.06:0,27,301	0/0:22,0:22:49.95:0,50,545	0/0:22,0:22:56.94:0,57,606	0/0:21,0:21:57.15:0,57,661	0/0:21,0:21:60.18:0,60,720	0/0:23,0:23:69.21:0,69,828	0/0:33,0:33:87.25:0,87,1031	0/0:31,0:31:81.23:0,81,959	0/0:33,0:33:96.29:0,96,1152	0/0:14,0:14:39.12:0,39,468	0/0:32,0:32:90.28:0,90,1080	0/0:20,0:20:57.17:0,57,683	0/0:31,0:31:84.26:0,84,1007	1/1:0,35:35:96.32:1344,96,0	0/0:32,0:32:87.25:0,87,1031	0/0:28,0:28:81.25:0,81,971	1/1:2,21:23:57.19:798,57,0	0/0:21,0:21:57.17:0,57,674	0/0:33,0:33:93.25:0,93,1091	0/0:47,0:47:99:0,132,1584	0/0:18,0:18:51.16:0,51,612	0/0:21,0:21:57.13:0,57,649	0/0:31,0:31:84.26:0,84,1008	0/0:22,0:22:63.19:0,63,755	0/1:3,23:26:7.99:869,0,8	0/0:26,0:26:75.23:0,75,900	1/1:1,11:12:30.10:420,30,0
chr10	84018388	.	CTTCTTCCTCCTT	C	682.55	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=5.401;DP=565;FS=8.723;HRun=0;HaplotypeScore=197.7124;InbreedingCoeff=0.9148;MQ=56.97;MQ0=13;MQRankSum=-5.329;QD=26.25;ReadPosRankSum=-1.199;VQSLOD=1.6694;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:64.86:0,65,1978	0/0:8,0:8:21.05:0,21,439	0/0:45,0:13:31.37:0,31,616	0/0:59,0:19:41.76:0,42,842	0/0:12,0:11:33.11:0,33,1369	0/0:21,0:21:63.22:0,63,3004	1/1:2,13:15:6.02:159,6,0	0/0:22,0:21:58.43:0,58,2063	0/0:27,0:27:81.26:0,81,3348	0/0:14,0:14:39.13:0,39,1519	0/0:5,0:5:14.94:0,15,514	0/0:26,0:26:75.25:0,75,3176	0/0:24,0:24:69.24:0,69,2785	0/0:21,0:21:60.21:0,60,2578	1/1:4,3:7:17.99:416,18,0	0/0:29,0:29:87.24:0,87,3278	0/0:13,0:12:11.29:0,11,1027	./.	0/0:19,0:16:42.14:0,42,1794	0/0:17,0:17:49.04:0,49,2040	0/0:39,0:39:99:0,108,5236	0/0:19,0:19:54.19:0,54,2437	0/0:15,0:15:44.98:0,45,1564	0/0:24,0:24:72.19:0,72,3710	0/0:13,0:13:39.13:0,39,2128	1/1:1,3:4:8.96:233,9,0	0/0:34,0:34:99:0,102,4574	./.
chr10	84018426	.	CT	C	71.18	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=3.998;DP=521;FS=0.000;HRun=1;HaplotypeScore=93.0348;InbreedingCoeff=0.7711;MQ=69.46;MQ0=2;MQRankSum=-3.084;QD=11.86;ReadPosRankSum=-1.486;VQSLOD=1.4108;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:47.59:0,48,668	0/0:4,0:4:12.02:0,12,161	0/0:36,1:23:51.43:0,51,679	0/0:45,1:26:43.03:0,43,586	0/0:15,0:15:36.12:0,36,536	0/0:22,0:22:61.04:0,61,857	0/0:12,0:12:8.99:0,9,111	0/0:21,0:21:63.19:0,63,909	0/0:25,0:25:75.25:0,75,1143	0/0:18,0:18:51.17:0,51,765	0/0:10,0:10:30.10:0,30,447	0/0:28,0:28:78.26:0,78,1183	0/0:20,0:20:60.20:0,60,900	0/0:34,0:34:99:0,99,1466	0/0:1,0:1:2.50:0,2,9	0/0:22,0:22:60.19:0,60,895	0/0:15,0:15:36.11:0,36,528	./.	0/0:14,0:13:39.12:0,39,573	0/0:17,0:17:51.17:0,51,773	0/0:18,0:18:41.24:0,41,681	0/0:18,0:18:54.15:0,54,758	0/0:15,0:15:45.15:0,45,688	0/0:20,0:20:51.14:0,51,732	0/0:24,0:24:69.23:0,69,1049	1/1:2,3:5:12:134,12,0	0/0:35,0:35:95.66:0,96,1382	1/1:0,1:1:3.01:39,3,0
chr10	84018453	.	C	CCTTT	5237.34	PASS	AB=0.692;AC=21;AF=0.375;AN=56;BaseQRankSum=-0.226;DP=562;FS=7.788;HRun=0;HaplotypeScore=130.0488;InbreedingCoeff=0.8066;MQ=67.77;MQ0=6;MQRankSum=-6.398;QD=45.15;ReadPosRankSum=-0.306;VQSLOD=5.3308;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,11:18:30.50:631,30,0	1/1:1,2:3:6.02:153,6,0	0/0:41,0:22:40.82:0,41,535	0/0:62,0:34:38.60:0,39,430	0/0:23,0:23:63.16:0,63,995	0/0:19,0:19:51.62:0,52,842	1/1:5,4:9:15.05:333,15,0	0/0:28,0:29:48.08:0,48,676	0/0:24,0:24:69.20:0,69,1136	1/1:8,11:19:48.07:1106,48,0	1/1:5,9:14:32.51:674,33,0	0/0:31,0:31:84.25:0,84,1387	0/0:25,0:25:69.22:0,69,1179	0/0:27,0:27:75.24:0,75,1263	1/1:4,1:5:8.94:117,9,0	1/1:5,12:17:48.13:1128,48,0	1/1:2,13:15:2.48:532,2,0	1/1:4,1:5:0.02:71,0,0	0/0:19,0:17:42.07:0,42,630	0/0:19,0:19:42.13:0,42,710	0/0:14,0:14:21:0,21,264	0/0:18,0:18:45.14:0,45,763	0/0:18,0:17:45.12:0,45,707	0/0:20,0:20:42.13:0,42,710	0/0:23,0:23:54.12:0,54,915	0/1:5,4:9:10.36:416,0,10	0/0:32,0:32:75:0,75,1201	1/1:0,1:1:3.01:77,3,0
chr10	84018462	.	CCT	C	381.72	PASS	AB=0.967;AC=8;AF=0.143;AN=56;BaseQRankSum=8.304;DP=607;FS=11.532;HRun=0;HaplotypeScore=133.2425;InbreedingCoeff=-0.1615;MQ=59.93;MQ0=10;MQRankSum=-6.059;QD=3.74;ReadPosRankSum=-3.566;VQSLOD=0.9164;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:17:4.14:4,0,181	0/1:5,0:5:30.07:30,0,113	0/0:53,0:19:48.22:0,48,834	0/0:73,0:34:49.42:0,49,869	0/0:23,0:23:69.22:0,69,1358	0/0:23,0:22:61.88:0,62,1214	0/1:10,0:10:2.94:3,0,65	0/0:24,0:24:60.20:0,60,1117	0/0:25,0:25:75.25:0,75,1465	0/0:17,0:19:56.69:0,57,710	0/1:17,0:16:18.32:18,0,429	0/0:30,0:30:90.28:0,90,1731	0/0:25,0:25:75.26:0,75,1521	0/0:27,0:28:81.28:0,81,1602	0/1:11,0:11:99:148,0,142	0/1:24,0:24:30.05:30,0,701	0/0:16,0:16:26.02:0,26,339	0/1:6,0:6:27.99:28,0,80	0/0:17,0:16:38.24:0,38,810	0/0:22,0:22:60.21:0,60,1176	0/0:13,0:13:9.09:0,9,425	0/0:18,0:18:54.17:0,54,1059	0/0:17,0:16:48.16:0,48,934	0/0:22,0:22:57.19:0,57,1110	0/0:22,0:22:54.19:0,54,1095	0/1:7,4:11:97.86:247,0,98	0/0:34,0:34:87.27:0,87,1656	0/0:1,0:1:2.99:0,3,24
chr10	84018469	.	C	CCTCT	1100.67	PASS	AB=0.864;AC=10;AF=0.185;AN=54;BaseQRankSum=8.758;DP=690;FS=15.299;HRun=0;HaplotypeScore=183.0320;InbreedingCoeff=0.7824;MQ=57.46;MQ0=16;MQRankSum=-8.808;QD=14.68;ReadPosRankSum=-3.256;VQSLOD=1.7774;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,4:19:12.38:248,12,0	0/0:9,0:9:10.22:0,10,118	0/0:61,0:18:15.97:0,16,253	0/0:88,0:37:42.54:0,43,495	0/0:28,0:28:66.22:0,66,1104	0/0:24,0:24:50.85:0,51,782	1/1:7,0:10:14.77:194,15,0	0/0:19,0:19:36.12:0,36,585	0/0:27,0:26:45.15:0,45,753	0/0:26,0:25:31:0,31,557	0/0:21,0:20:33.46:0,33,516	0/0:37,0:37:66.22:0,66,1091	0/0:32,0:32:63.19:0,63,1026	0/0:33,0:33:63.21:0,63,1052	1/1:6,5:12:24.76:378,25,0	0/0:29,0:29:16.29:0,16,564	0/0:18,0:18:24.03:0,24,353	0/1:5,3:8:3.16:284,0,3	0/0:15,0:16:39.12:0,39,588	0/0:21,0:21:54.17:0,54,865	0/1:12,0:12:2.95:3,0,180	0/0:18,0:18:48.16:0,48,801	0/0:19,0:18:42.11:0,42,647	0/0:23,0:23:54.17:0,54,859	0/0:25,0:26:45.13:0,45,711	1/1:12,0:13:6.45:148,6,0	0/0:35,0:35:60.19:0,60,949	./.
chr10	84018484	.	CT	C	671.84	PASS	AB=0.821;AC=9;AF=0.167;AN=54;BaseQRankSum=8.777;DP=757;FS=1.370;HRun=2;HaplotypeScore=156.6182;InbreedingCoeff=-0.1898;MQ=49.84;MQ0=23;MQRankSum=-8.025;QD=3.91;ReadPosRankSum=0.723;VQSLOD=0.4137;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:5.43:5,0,49	0/1:9,4:12:91.54:92,0,123	0/0:82,0:20:47.73:0,48,627	0/0:99,0:32:61.11:0,61,778	0/0:30,0:30:84.27:0,84,1223	0/0:24,1:24:30.47:0,30,877	0/1:8,3:11:26.84:27,0,27	0/0:21,0:21:60.19:0,60,845	0/0:24,0:23:60.67:0,61,879	0/1:23,9:31:99:233,0,687	0/1:24,6:28:8.56:9,0,487	0/0:41,0:41:99:0,114,1644	0/0:32,0:32:96.30:0,96,1382	0/0:34,0:34:94.56:0,95,1374	0/1:11,5:16:63.43:196,0,63	0/1:18,10:28:99:121,0,534	0/0:16,4:18:32.47:0,32,451	0/1:7,1:8:14.11:14,0,133	0/0:16,0:16:40.24:0,40,572	0/0:22,0:22:60.09:0,60,829	0/0:10,0:10:18.01:0,18,227	0/0:21,0:21:63.21:0,63,923	0/0:21,0:20:57.18:0,57,809	0/0:25,0:25:69.19:0,69,988	0/0:28,0:28:43.96:0,44,635	0/1:11,3:14:99:109,0,186	0/0:34,0:34:81.12:0,81,1077	./.
chr10	84018485	.	TTCTTTCTTTTC	T	2544.05	PASS	AB=0.938;AC=11;AF=0.204;AN=54;BaseQRankSum=8.958;DP=741;FS=1.190;HRun=0;HaplotypeScore=249.5194;InbreedingCoeff=-0.2560;MQ=49.94;MQ0=23;MQRankSum=-8.265;QD=12.66;ReadPosRankSum=0.048;VQSLOD=2.5402;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,1:16:86.64:87,0,192	0/1:13,0:13:99:203,0,381	0/0:78,0:20:50.80:0,51,1646	0/0:97,0:32:59.83:0,60,1736	0/0:29,0:29:84.29:0,84,4510	0/0:25,0:24:15.13:0,15,3325	0/1:8,0:8:36.65:172,0,37	0/0:20,0:20:60.20:0,60,1818	0/0:23,0:23:66.70:0,67,3191	0/1:30,1:30:99:503,0,2282	0/1:23,7:28:74.73:75,0,1408	0/0:39,0:39:99:0,117,5593	0/0:32,0:32:96.31:0,96,4974	0/0:34,0:34:99:0,99,4750	0/1:11,5:16:99:603,0,155	0/1:24,3:27:99:427,0,1402	0/0:17,1:17:25.82:0,26,1362	0/1:7,0:7:99:171,0,362	0/0:16,0:16:34.20:0,34,1542	0/0:21,0:21:60.19:0,60,1998	0/1:10,0:10:18.31:18,0,352	0/0:21,0:21:63.22:0,63,3408	0/0:21,0:20:57.20:0,57,2857	0/0:25,0:25:69.24:0,69,3324	0/1:28,0:28:20.06:20,0,2123	0/1:12,1:13:99:412,0,324	0/0:35,0:35:88.84:0,89,2117	./.
chr10	84018488	.	TTTCTTTTC	T	1806.90	PASS	AB=0.958;AC=10;AF=0.185;AN=54;BaseQRankSum=8.709;DP=746;FS=2.769;HRun=0;HaplotypeScore=221.6194;InbreedingCoeff=-0.2249;MQ=49.71;MQ0=23;MQRankSum=-7.324;QD=10.09;ReadPosRankSum=0.991;VQSLOD=2.4339;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:44.13:44,0,263	0/1:14,0:13:99:106,0,274	0/0:79,0:18:47.72:0,48,1301	0/0:101,0:34:49.30:0,49,1509	0/0:29,0:29:84.27:0,84,3431	0/0:26,0:25:46.40:0,46,2654	0/1:10,0:10:91.72:103,0,92	0/0:20,0:20:60.09:0,60,1241	0/0:25,0:24:69.70:0,70,2521	0/1:30,0:29:99:514,0,1715	0/1:30,0:28:42.81:43,0,961	0/0:38,0:38:99:0,111,4303	0/0:32,0:32:96.29:0,96,3885	0/0:34,0:34:99:0,99,3597	0/1:11,5:16:99:512,0,241	0/1:25,2:27:99:232,0,873	0/0:19,0:17:18.31:0,18,1043	0/1:7,1:8:99:131,0,425	0/1:15,0:15:8.49:8,0,1049	0/0:22,0:22:62.93:0,63,1210	0/0:11,0:11:15.88:0,16,215	0/0:21,0:21:63.20:0,63,2608	0/0:19,0:19:54.18:0,54,2149	0/0:24,0:24:66.17:0,66,2477	0/0:31,0:31:37.21:0,37,1614	0/1:14,0:13:99:254,0,459	0/0:36,0:36:87.66:0,88,1150	./.
chr10	84018492	.	TTTTC	T	1587.28	PASS	AB=0.851;AC=10;AF=0.185;AN=54;BaseQRankSum=8.775;DP=728;FS=4.570;HRun=0;HaplotypeScore=177.9552;InbreedingCoeff=-0.2270;MQ=49.10;MQ0=20;MQRankSum=-6.519;QD=8.97;ReadPosRankSum=1.039;VQSLOD=3.0345;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:20.07:20,0,178	0/1:10,5:14:99:188,0,231	0/0:76,0:19:47.71:0,48,940	0/0:96,0:33:51.43:0,51,1168	0/0:29,0:29:84.29:0,84,2239	0/0:26,0:25:55.93:0,56,1713	0/1:8,3:11:66.35:66,0,94	0/0:18,0:18:52.22:0,52,833	0/0:24,1:24:69.70:0,70,1658	0/1:21,9:29:99:530,0,1130	0/1:23,6:27:55.52:56,0,624	0/0:37,0:37:99:0,108,2854	0/0:33,0:33:99:0,99,2622	0/0:34,0:34:97.53:0,98,2371	0/1:16,0:16:99:339,0,189	0/1:16,8:24:99:266,0,527	0/1:14,4:16:14.17:14,0,649	0/1:8,0:8:80.75:81,0,270	0/0:15,0:15:38.54:0,39,841	0/0:24,0:23:62.82:0,63,903	0/0:10,0:10:14.89:0,15,142	0/0:22,0:22:66.23:0,66,1755	0/0:18,0:18:51.17:0,51,1359	0/0:22,0:22:60.15:0,60,1573	0/0:32,0:32:21.55:0,22,1103	0/1:10,3:12:99:171,0,393	0/0:34,0:34:77.10:0,77,816	./.
chr10	84018496	.	CCTCTCT	C	2932.36	PASS	AB=1.000;AC=14;AF=0.259;AN=54;BaseQRankSum=5.865;DP=745;FS=5.972;HRun=0;HaplotypeScore=188.1937;InbreedingCoeff=0.7604;MQ=48.36;MQ0=20;MQRankSum=-7.362;QD=20.65;ReadPosRankSum=0.090;VQSLOD=2.7609;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:22:5.60:0,6,47	0/0:16,0:15:15.86:0,16,158	0/0:69,0:18:18.76:0,19,550	0/0:93,0:30:24.75:0,25,534	0/0:29,0:30:72.25:0,72,2070	0/0:22,0:24:59.78:0,60,1677	0/1:13,0:13:4.35:4,0,77	1/1:8,10:18:27.08:532,27,0	0/0:24,0:24:51.64:0,52,1383	0/0:35,0:34:71.46:0,71,952	0/0:31,0:29:12.20:0,12,137	0/0:38,0:39:90.31:0,90,2802	0/0:38,0:38:99:0,99,2927	0/0:31,0:31:69.22:0,69,1962	1/1:16,0:16:5.60:29,6,0	0/0:24,0:24:15.26:0,15,185	0/0:20,0:18:24.04:0,24,348	0/0:9,0:9:22.54:0,23,461	1/1:8,6:15:21.05:361,21,0	1/1:8,16:23:45.08:851,45,0	1/1:3,7:10:3.01:64,3,0	0/0:22,0:23:63.21:0,63,1717	0/0:19,0:19:48.15:0,48,1368	0/0:21,0:21:48.15:0,48,1483	0/0:32,0:32:24.40:0,24,521	0/1:14,0:13:4.83:5,0,368	1/1:5,26:32:60.10:1260,60,0	./.
chr10	84018519	.	C	CTCTCTTCTTTCT	1540.91	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=6.515;DP=700;FS=12.966;HRun=0;HaplotypeScore=262.3152;InbreedingCoeff=-0.0225;MQ=56.89;MQ0=12;MQRankSum=-8.480;QD=6.82;ReadPosRankSum=-1.897;VQSLOD=0.8459;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:2.33:0,2,282	0/0:17,0:16:9.76:0,10,376	0/0:43,0:18:32.78:0,33,520	0/0:60,0:26:38.08:0,38,892	0/0:34,0:34:99:0,102,2984	0/1:24,0:24:6.90:7,0,1716	0/1:15,0:15:0.26:0,0,203	0/0:16,0:16:43.37:0,43,825	0/0:19,0:19:49.89:0,50,1368	0/1:30,0:30:99:282,0,352	0/1:24,0:26:52.50:52,0,284	0/0:40,0:40:99:0,117,3394	0/0:39,0:39:99:0,114,3471	0/0:31,0:31:78.25:0,78,2237	0/1:26,0:27:73.11:73,0,576	0/1:27,0:28:58.08:58,0,553	0/1:18,0:17:99:148,0,261	0/1:12,0:12:8.06:8,0,452	0/0:14,0:14:29.61:0,30,724	0/0:21,0:20:43.67:0,44,1077	0/0:15,0:14:15.05:0,15,359	0/0:24,0:24:63.20:0,63,1846	0/0:21,0:21:63.20:0,63,1759	0/0:18,0:18:50.95:0,51,1573	1/1:3,13:27:18.53:1012,19,0	0/1:14,0:14:43.96:44,0,446	0/0:36,0:36:87.24:0,87,2287	0/0:2,0:1:3.01:0,3,78
chr10	84020107	.	C	CGGT	5569.84	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.330;DP=659;FS=0.421;HRun=0;HaplotypeScore=109.6004;InbreedingCoeff=0.9989;MQ=82.82;MQ0=0;MQRankSum=-11.152;QD=59.89;ReadPosRankSum=-0.953;VQSLOD=6.2409;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1758	1/1:2,8:10:30.06:622,30,0	0/0:23,0:23:66.22:0,66,1186	0/0:19,0:19:48.16:0,48,870	0/0:36,0:36:99:0,105,1919	0/0:30,0:30:87.30:0,87,1604	0/0:22,0:22:60.19:0,60,1086	0/0:22,0:22:66.17:0,66,1193	0/0:15,0:15:45.14:0,45,802	1/1:4,19:23:66.21:1468,66,0	1/1:6,18:24:63.20:1367,63,0	0/0:27,0:27:81.28:0,81,1504	0/0:24,0:24:72.23:0,72,1298	0/0:30,0:30:90.31:0,90,1668	0/0:30,0:30:87.29:0,87,1592	1/1:3,15:18:51.14:1118,51,0	1/1:2,16:18:45.15:995,45,0	0/0:16,0:16:45.15:0,45,838	0/0:9,0:9:27.09:0,27,503	0/0:30,0:30:87.28:0,87,1580	0/0:30,0:29:90.29:0,90,1641	0/0:35,0:35:99:0,102,1900	0/0:14,0:14:42.14:0,42,781	0/0:27,0:27:81.28:0,81,1487	0/0:19,0:19:57.20:0,57,1060	0/0:29,1:30:22.55:0,23,1552	0/0:31,0:31:90.31:0,90,1665	0/0:14,0:14:42.14:0,42,782
chr10	84020128	.	CAA	C	2349.65	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.325;DP=628;FS=0.000;HRun=11;HaplotypeScore=99.9778;InbreedingCoeff=0.9990;MQ=76.80;MQ0=0;MQRankSum=-8.247;QD=23.26;ReadPosRankSum=0.112;VQSLOD=3.2312;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:34:73.30:0,73,275	1/1:3,8:11:24.04:255,24,0	0/0:17,0:18:26.92:0,27,366	0/0:16,0:17:29.45:0,29,353	0/0:30,0:31:80.76:0,81,1205	0/0:29,0:31:81.23:0,81,1201	0/0:4,0:21:37.94:0,38,165	0/0:25,0:25:63.21:0,63,969	0/0:13,0:13:39.13:0,39,597	1/1:5,16:22:50.84:523,51,0	1/1:6,15:21:42.08:447,42,0	0/0:29,0:29:75.24:0,75,1123	0/0:22,0:22:57.18:0,57,854	0/0:26,0:27:72.24:0,72,1085	0/0:25,0:25:57.18:0,57,845	1/1:2,23:25:66.16:701,66,0	1/1:3,19:22:57.11:599,57,0	0/0:15,0:15:42.14:0,42,647	0/0:14,0:14:39.13:0,39,596	0/0:23,0:24:51.16:0,51,748	0/0:23,0:23:57.17:0,57,836	0/0:26,0:28:69.23:0,69,1037	0/0:16,0:16:42.09:0,42,624	0/0:28,0:28:75.24:0,75,1133	0/0:17,0:17:39.12:0,39,562	0/0:27,0:27:60.20:0,60,902	0/0:28,1:31:45.80:0,46,1047	0/0:11,0:11:33.11:0,33,507
chr10	84020238	.	C	CG	843.70	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.295;DP=732;FS=3.646;HRun=6;HaplotypeScore=75.7170;InbreedingCoeff=0.9977;MQ=81.22;MQ0=0;MQRankSum=-2.136;QD=21.09;ReadPosRankSum=1.906;VQSLOD=3.0908;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,36:40:75.24:939,75,0	0/0:13,0:13:36.08:0,36,365	0/0:25,0:25:42.94:0,43,409	0/0:19,0:19:32.20:0,32,344	0/0:18,0:18:48.05:0,48,464	0/0:30,0:30:81.18:0,81,826	0/0:24,0:24:57.11:0,57,576	0/0:34,0:34:81.01:0,81,789	0/0:21,0:21:54.10:0,54,543	0/0:33,0:33:72.01:0,72,695	0/0:17,0:17:41.07:0,41,391	0/0:39,0:39:99:0,108,1059	0/0:25,0:25:54.01:0,54,515	0/0:30,0:30:83.90:0,84,824	0/0:44,0:44:99:0,120,1194	0/0:34,0:34:93.11:0,93,906	0/0:33,0:33:71.84:0,72,699	0/0:20,0:20:56.81:0,57,545	0/0:24,0:24:51.10:0,51,516	0/0:19,0:19:51.06:0,51,500	0/0:22,0:22:59.43:0,59,567	0/0:28,0:28:60.06:0,60,577	0/0:21,0:21:54.07:0,54,528	0/0:37,0:37:99:0,102,1025	0/0:15,0:15:45.02:0,45,436	0/0:3,0:17:29.38:0,29,95	0/0:36,0:36:99:0,99,979	0/0:0,0:14:26.67:0,27,79
chr10	84020942	.	C	CT	227.59	PASS	AB=0.957;AC=3;AF=0.054;AN=56;BaseQRankSum=-3.383;DP=714;FS=6.545;HRun=10;HaplotypeScore=71.6122;InbreedingCoeff=0.6660;MQ=73.65;MQ0=0;MQRankSum=-1.733;QD=6.90;ReadPosRankSum=-1.683;VQSLOD=1.3380;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:63.13:0,63,457	0/0:11,0:11:32.95:0,33,269	0/0:14,0:14:26.06:0,26,231	0/0:15,0:15:19.41:0,19,161	0/0:33,0:34:57.72:0,58,601	0/0:34,0:34:80.46:0,80,649	1/1:0,11:11:30.08:320,30,0	0/0:26,0:26:62.80:0,63,503	0/0:24,0:24:62.68:0,63,490	0/0:28,1:29:52.90:0,53,559	0/0:22,0:23:52.80:0,53,412	0/0:27,0:28:76.92:0,77,616	0/0:34,0:34:92.83:0,93,753	0/0:44,0:44:99:0,117,947	0/0:29,1:30:45.88:0,46,579	0/0:34,0:35:88.91:0,89,715	0/0:28,0:28:64.87:0,65,513	0/0:19,0:19:32.88:0,33,262	0/0:23,0:24:49.92:0,50,393	0/0:31,0:31:67.11:0,67,518	0/0:17,0:17:35.45:0,35,280	0/0:17,0:17:35.05:0,35,375	0/0:20,0:21:40.91:0,41,320	0/0:23,0:23:59.91:0,60,492	0/1:21,1:22:9.99:10,0,214	0/0:36,0:36:82.54:0,83,660	0/0:40,0:40:99:0,108,877	0/0:17,0:18:43.88:0,44,342
chr10	84021318	.	AT	A	1571.18	PASS	AB=0.789;AC=28;AF=0.500;AN=56;BaseQRankSum=2.260;DP=538;FS=4.045;HRun=16;HaplotypeScore=67.6537;InbreedingCoeff=0.2963;MQ=71.99;MQ0=8;MQRankSum=1.127;QD=4.50;ReadPosRankSum=1.473;VQSLOD=1.5201;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:20:23.03:0,23,137	0/1:3,4:7:16.43:27,0,16	0/0:38,0:16:11.83:0,12,80	0/1:20,0:13:11.01:11,0,58	0/0:21,2:25:17.58:0,18,340	0/0:20,1:22:12.75:0,13,302	0/0:12,0:12:23.97:0,24,201	1/1:10,17:28:38.61:237,39,0	0/1:10,0:10:27.44:27,0,71	1/1:11,5:18:29.90:171,30,0	1/1:10,4:17:25.95:132,26,0	0/1:18,2:21:9.90:10,0,165	0/0:15,0:15:35.92:0,36,293	0/0:18,0:18:8.93:0,9,175	1/1:12,2:22:26.16:94,26,0	1/1:5,12:19:31.02:177,31,0	0/1:14,14:30:45.87:134,0,46	0/1:8,0:25:8.72:40,0,9	0/1:13,7:20:25.49:73,0,25	1/1:10,13:24:30.36:183,30,0	1/1:7,5:13:1.23:62,1,0	0/1:7,1:10:0.34:0,0,86	0/1:14,1:17:4.04:4,0,91	0/0:15,0:15:14.38:0,14,172	0/0:9,0:23:25.46:0,25,136	0/1:6,15:21:5:189,0,5	1/1:6,9:17:1.88:97,2,0	1/1:2,5:7:14.69:90,15,0
chr10	84022054	.	TA	T	3124.73	PASS	AB=0.875;AC=23;AF=0.411;AN=56;BaseQRankSum=7.054;DP=556;FS=1.199;HRun=12;HaplotypeScore=66.0553;InbreedingCoeff=0.8780;MQ=77.80;MQ0=3;MQRankSum=-1.011;QD=12.91;ReadPosRankSum=3.504;VQSLOD=3.9548;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:31:38.68:112,39,0	1/1:0,1:1:2.99:23,3,0	0/0:27,0:21:24.70:0,25,211	0/0:18,0:14:11.47:0,11,111	0/0:15,0:15:42.07:0,42,421	0/0:15,0:15:24.02:0,24,235	1/1:6,25:35:67.69:488,68,0	0/0:18,0:18:45.08:0,45,452	0/0:24,0:24:54.02:0,54,522	1/1:2,15:18:43.83:327,44,0	1/1:3,7:10:20.41:148,20,0	0/0:27,0:27:69.14:0,69,700	0/0:25,1:26:42.85:0,43,600	0/0:19,0:19:42.08:0,42,426	1/1:3,16:19:38.84:302,39,0	1/1:4,24:28:59.76:464,60,0	1/1:2,28:30:71.72:557,72,0	1/1:3,25:30:72.80:546,73,0	0/0:21,0:21:22.06:0,22,403	0/0:10,1:12:9.78:0,10,266	0/1:12,2:14:13.40:13,0,240	0/0:10,0:10:24.05:0,24,243	0/0:11,0:11:27.05:0,27,274	0/0:29,1:31:36.47:0,36,682	0/0:18,1:19:21.84:0,22,398	1/1:5,12:17:8.39:246,8,0	0/0:20,0:20:45.03:0,45,432	1/1:2,7:9:14.92:116,15,0
chr10	84023614	.	C	CT	2302.50	PASS	AB=0.794;AC=22;AF=0.393;AN=56;BaseQRankSum=-1.517;DP=639;FS=0.822;HRun=13;HaplotypeScore=80.0864;InbreedingCoeff=0.3337;MQ=69.21;MQ0=6;MQRankSum=-0.016;QD=6.27;ReadPosRankSum=-0.054;VQSLOD=2.4719;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,1:22:2.75:105,0,3	0/1:2,3:6:5.72:83,0,6	0/0:21,0:16:9.76:0,10,59	0/1:26,0:14:11.92:12,0,21	0/0:26,0:26:33.90:0,34,324	0/0:29,0:29:45.96:0,46,370	0/1:19,1:20:2.28:2,0,241	0/1:31,2:32:3.34:3,0,259	0/0:18,0:22:37.73:0,38,228	0/1:11,23:35:8.90:461,0,9	1/1:12,7:20:34.66:263,35,0	0/0:26,0:24:46.57:0,47,312	0/0:15,0:15:22.24:0,22,147	0/0:21,0:21:33.70:0,34,217	1/1:11,16:27:18.28:295,18,0	1/1:7,15:22:12.29:245,12,0	1/1:9,25:34:6.69:348,7,0	0/1:5,10:15:12.74:204,0,13	0/1:12,1:15:13.33:13,0,121	0/0:24,3:27:19.65:0,20,279	0/1:18,1:20:11.48:11,0,151	0/0:14,1:15:14.99:0,15,238	0/0:9,0:11:10.88:0,11,80	0/1:16,3:19:28.97:29,0,117	0/0:19,0:19:42.85:0,43,305	1/1:9,0:28:40.05:229,40,0	0/0:32,0:37:56.79:0,57,364	1/1:6,1:20:32.13:184,32,0
chr10	84025472	.	T	TG	127.45	PASS	AB=0.861;AC=4;AF=0.071;AN=56;BaseQRankSum=8.251;DP=493;FS=24.811;HRun=0;HaplotypeScore=82.9708;InbreedingCoeff=-0.0688;MQ=68.04;MQ0=7;MQRankSum=-1.670;QD=1.77;ReadPosRankSum=-1.171;VQSLOD=0.1585;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:25.93:0,26,516	0/0:2,0:2:2.80:0,3,13	0/0:22,0:12:34.90:0,35,407	0/0:28,0:21:50.28:0,50,654	0/0:25,0:25:69.19:0,69,906	0/0:27,0:27:72.23:0,72,987	0/0:23,0:23:63.13:0,63,737	0/0:13,0:12:31.29:0,31,445	0/0:13,0:13:39.13:0,39,538	0/1:16,2:18:51.04:51,0,85	0/1:13,0:12:25.22:25,0,65	0/0:26,0:26:72.67:0,73,968	0/0:24,0:24:66.21:0,66,904	0/0:12,0:12:30.10:0,30,419	0/0:13,0:12:16.89:0,17,303	0/1:19,10:29:99:115,0,103	0/1:9,3:12:19.44:46,0,19	0/0:10,0:9:24.08:0,24,326	0/0:16,0:16:48.07:0,48,645	0/0:8,0:8:8.94:0,9,82	0/0:17,0:16:43.47:0,43,463	0/0:28,0:28:62.98:0,63,784	0/0:19,0:19:54.17:0,54,738	0/0:18,0:18:48.16:0,48,661	0/0:9,0:9:23.95:0,24,258	0/0:16,0:15:45.14:0,45,611	0/0:21,0:21:56.31:0,56,719	0/0:6,0:6:17.92:0,18,154
chr10	84028751	.	GC	G	3204.07	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.507;DP=636;FS=11.988;HRun=2;HaplotypeScore=80.5414;InbreedingCoeff=0.9821;MQ=86.48;MQ0=0;MQRankSum=-2.472;QD=33.73;ReadPosRankSum=2.542;VQSLOD=3.0984;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,147,2157	1/1:0,3:3:9.03:117,9,0	0/0:23,0:23:65.95:0,66,874	0/0:19,0:19:48.63:0,49,701	0/0:12,0:12:36.12:0,36,537	0/0:22,0:22:60.16:0,60,836	0/0:23,0:23:63.19:0,63,901	0/0:25,0:25:72.22:0,72,1027	0/0:28,0:28:81.27:0,81,1208	1/1:0,17:17:48.16:623,48,0	1/1:0,7:7:15.05:195,15,0	0/0:28,0:28:81.27:0,81,1203	0/0:25,0:25:72.24:0,72,1068	0/0:33,0:33:90.27:0,90,1280	0/0:26,0:26:78.25:0,78,1146	1/1:0,22:22:63.20:813,63,0	1/1:1,45:46:99:1628,126,0	0/0:34,0:33:99:0,102,1456	0/0:18,0:18:51.13:0,51,739	0/0:13,0:13:36.12:0,36,530	0/0:41,0:41:99:0,123,1810	0/0:19,0:19:54.17:0,54,787	0/0:13,0:13:39.12:0,39,556	0/0:25,0:25:72.24:0,72,1072	0/0:12,0:12:30.10:0,30,447	0/0:20,0:20:57.19:0,57,854	0/0:22,0:22:66.21:0,66,967	0/0:9,0:9:27.09:0,27,398
chr10	84028763	.	AC	A	1615.59	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.778;DP=659;FS=4.439;HRun=3;HaplotypeScore=88.2772;InbreedingCoeff=0.9334;MQ=81.80;MQ0=0;MQRankSum=-4.529;QD=31.07;ReadPosRankSum=1.980;VQSLOD=3.6206;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,50:52:99:1710,138,0	0/0:3,0:3:9.03:0,9,129	0/0:21,0:21:57.19:0,57,810	0/0:14,0:14:39.13:0,39,548	0/0:14,0:14:33.09:0,33,435	0/0:20,0:20:60.16:0,60,795	0/0:26,0:26:75.22:0,75,1024	0/0:31,0:31:81.24:0,81,1098	0/0:33,0:33:87.25:0,87,1182	0/0:20,0:20:57.14:0,57,780	0/0:11,0:11:24.05:0,24,313	0/0:32,0:32:87.22:0,87,1176	0/0:24,0:24:69.19:0,69,937	0/0:32,0:32:78.23:0,78,1074	0/0:24,0:24:72.22:0,72,1001	0/0:20,0:20:57.17:0,57,783	0/0:47,0:47:99:0,129,1782	0/0:33,0:32:93.27:0,93,1293	0/0:20,0:20:60.17:0,60,798	0/0:8,0:8:24.08:0,24,342	0/0:47,0:47:99:0,126,1807	0/0:25,0:25:75.17:0,75,984	0/0:17,0:17:42.11:0,42,565	0/0:21,0:21:63.21:0,63,907	0/0:10,0:10:27.08:0,27,372	0/0:22,0:22:66.19:0,66,899	0/0:26,0:26:78.22:0,78,1068	0/0:6,0:6:18.06:0,18,259
chr10	84028965	.	GCA	G	2878.01	PASS	AB=0.967;AC=31;AF=0.554;AN=56;BaseQRankSum=0.806;DP=367;FS=0.000;HRun=0;HaplotypeScore=55.7321;InbreedingCoeff=0.5629;MQ=92.54;MQ0=0;MQRankSum=-4.777;QD=14.61;ReadPosRankSum=-0.854;VQSLOD=2.6871;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:24:20.86:285,21,0	1/1:0,1:1:3.01:37,3,0	0/0:20,0:20:54.07:0,54,673	0/0:16,0:17:37.88:0,38,545	0/0:5,0:5:14.73:0,15,103	0/0:13,0:13:31.70:0,32,377	1/1:14,3:17:40.11:373,40,0	1/1:19,0:20:34.62:363,35,0	0/0:19,0:19:42.59:0,43,626	1/1:1,5:6:14.95:152,15,0	1/1:1,0:1:3.01:44,3,0	0/0:29,0:29:66.45:0,66,855	0/0:17,0:17:36.23:0,36,447	0/0:23,0:23:61.91:0,62,718	0/1:11,0:12:36.27:36,0,54	1/1:5,16:22:19.82:467,20,0	1/1:1,15:17:42.13:615,42,0	0/1:10,0:11:5.98:51,0,6	0/1:14,0:14:4.53:148,0,5	1/1:1,0:1:2.90:16,3,0	1/1:18,0:18:18.23:226,18,0	0/0:4,0:4:8.95:0,9,77	0/1:4,1:5:19.93:20,0,88	0/0:23,0:23:58.53:0,59,634	1/1:5,0:5:5.92:39,6,0	1/1:10,0:10:19.35:107,19,0	0/1:9,0:9:14.57:64,0,15	1/1:4,0:4:7.11:37,7,0
chr10	84028966	.	CA	C	2905.78	PASS	AB=0.933;AC=35;AF=0.625;AN=56;BaseQRankSum=1.817;DP=361;FS=1.412;HRun=1;HaplotypeScore=50.6213;InbreedingCoeff=0.7088;MQ=93.23;MQ0=0;MQRankSum=-6.806;QD=14.68;ReadPosRankSum=-0.103;VQSLOD=2.9621;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,1:23:20.70:147,21,0	1/1:1,0:1:2.84:14,3,0	0/0:20,0:20:54:0,54,551	0/0:17,0:17:33.04:0,33,397	0/0:5,0:5:11.47:0,11,70	0/1:13,1:14:29.51:30,0,215	1/1:15,2:17:44.96:410,45,0	1/1:18,1:19:47.09:407,47,0	0/0:17,2:19:6.19:0,6,395	1/1:5,0:5:14.87:105,15,0	1/1:0,1:1:2.98:21,3,0	0/0:29,1:30:7.25:0,7,579	0/0:16,1:17:3.63:0,4,294	0/0:23,0:23:55.77:0,56,508	1/1:13,0:13:7.93:111,8,0	1/1:18,3:21:36.26:266,36,0	1/1:16,0:16:41.75:307,42,0	1/1:11,0:11:24.19:176,24,0	1/1:13,0:13:28.82:250,29,0	1/1:1,0:1:2.84:14,3,0	1/1:18,0:18:46.03:371,46,0	0/0:4,0:4:7.51:0,8,48	0/0:5,0:5:2.82:0,3,76	0/0:22,1:23:8.77:0,9,376	1/1:2,1:3:5.92:39,6,0	1/1:9,0:9:26.46:175,26,0	1/1:6,3:9:14.12:194,14,0	1/1:4,0:4:10.41:65,10,0
chr10	84028969	.	C	CT	300.56	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.721;DP=357;FS=10.232;HRun=0;HaplotypeScore=61.0063;InbreedingCoeff=0.6632;MQ=92.28;MQ0=0;MQRankSum=-1.466;QD=25.05;ReadPosRankSum=1.097;VQSLOD=4.1394;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:20.96:0,21,184	0/0:1,0:1:2.97:0,3,20	0/0:19,0:19:54.06:0,54,590	0/0:18,0:17:43.71:0,44,453	0/0:6,0:6:17.97:0,18,164	0/0:14,0:14:33.86:0,34,335	0/0:17,0:17:42.33:0,42,361	0/0:13,0:13:35.85:0,36,299	0/0:19,0:19:53.92:0,54,538	0/0:5,0:5:8.93:0,9,65	0/0:2,0:2:2.62:0,3,23	0/0:29,0:29:75.78:0,76,756	0/0:16,0:16:35.99:0,36,391	0/0:20,0:20:54.49:0,54,569	0/0:14,0:14:33.99:0,34,347	0/0:23,0:23:41.38:0,41,342	0/0:17,0:17:41.66:0,42,347	0/0:12,0:12:22.09:0,22,184	0/0:12,0:12:32.73:0,33,274	0/0:1,0:1:3.01:0,3,34	0/0:20,0:20:37.70:0,38,352	0/0:4,0:4:9.02:0,9,108	0/0:5,0:5:14.93:0,15,136	0/0:22,0:22:62.92:0,63,625	0/0:3,0:3:5.18:0,5,26	1/1:0,9:9:27.05:311,27,0	0/0:9,0:9:24.02:0,24,233	1/1:0,3:3:9:103,9,0
chr10	84029271	.	TTTC	T	678.75	PASS	AB=1.000;AC=19;AF=0.594;AN=32;BaseQRankSum=-3.819;DP=156;FS=0.000;HRun=0;HaplotypeScore=31.9457;InbreedingCoeff=0.2991;MQ=43.96;MQ0=48;MQRankSum=0.568;QD=9.05;ReadPosRankSum=1.743;VQSLOD=2.2269;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:2:2.96:0,3,19	1/1:0,1:1:3.01:48,3,0	0/1:27,0:6:20.03:20,0,63	0/0:36,0:7:8.75:0,9,83	./.	0/1:4,0:2:0:0,0,0	./.	./.	./.	1/1:6,9:12:30.10:486,30,0	1/1:2,2:2:2.81:14,3,0	1/1:2,0:1:2.68:11,3,0	./.	./.	./.	1/1:1,4:5:11.74:129,12,0	1/1:3,2:4:2.80:49,3,0	0/0:2,0:1:3.01:0,3,56	./.	1/1:3,0:3:2.37:8,2,0	./.	./.	0/0:1,0:1:0:0,0,0	./.	1/1:4,1:5:2.27:9,2,0	0/1:4,0:3:1.13:8,0,1	./.	0/0:11,0:1:2.04:0,2,6
chr10	84029415	.	ACTCT	A	225.23	PASS	AC=12;AF=0.857;AN=14;BaseQRankSum=-1.211;DP=83;FS=20.212;HRun=0;HaplotypeScore=19.5777;MQ=29.43;MQ0=10;MQRankSum=0.404;QD=6.09;ReadPosRankSum=2.153;VQSLOD=-0.4710;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:11,0:3:5.87:0,6,82	./.	./.	./.	./.	1/1:1,0:4:6.87:19,7,0	./.	1/1:0,0:11:4.74:31,5,0	./.	./.	1/1:1,0:1:0.47:1,0,0	./.	./.	./.	1/1:0,9:10:2.76:36,3,0	./.	1/1:1,5:5:14.08:172,14,0	./.	./.	./.	./.	./.	./.	./.	1/1:0,3:4:3.01:46,3,0	./.
chr10	84029463	.	ACGCACGCACGCACGCACGCACG	A	1217.61	PASS	AB=1.000;AC=22;AF=0.524;AN=42;BaseQRankSum=3.776;DP=330;FS=20.269;HRun=0;HaplotypeScore=104.7574;InbreedingCoeff=0.6837;MQ=32.72;MQ0=22;MQRankSum=-4.293;QD=7.52;ReadPosRankSum=-1.854;VQSLOD=0.3900;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/0:3,0:2:3.48:0,3,120	0/0:18,0:18:13.82:0,14,716	1/1:8,0:7:3.01:70,3,0	1/1:10,0:9:14.70:75,15,0	0/0:12,0:11:9.97:0,10,279	1/1:15,0:12:9.40:37,9,0	./.	0/0:23,0:22:20.20:0,20,1128	0/0:14,0:14:23.90:0,24,1121	0/0:21,0:18:24.08:0,24,1368	./.	0/1:11,0:10:0:0,0,0	1/1:22,0:19:4.26:112,4,0	1/1:9,0:8:22.97:384,23,0	1/1:16,0:15:14.48:247,14,0	./.	1/1:30,0:25:0.47:1,0,0	0/0:5,0:5:3.01:0,3,232	0/0:4,0:4:0:0,0,0	0/0:27,0:25:24.08:0,24,1241	0/1:10,0:10:0.02:1,0,0	1/1:6,13:18:22.35:292,22,0	1/1:9,0:9:5.99:101,6,0	1/1:3,0:3:6.28:47,6,0
chr10	84031148	.	C	CTTTCTGGTAAGCAGGCAT	66901.01	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-5.461;DP=762;FS=1.737;HRun=0;HaplotypeScore=267.7243;InbreedingCoeff=0.9990;MQ=77.46;MQ0=1;MQRankSum=-17.251;QD=135.43;ReadPosRankSum=0.079;VQSLOD=4.4545;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,9:41:48.16:3981,48,0	1/1:2,7:26:29.87:2172,30,0	0/0:17,0:17:48.16:0,48,1854	0/0:29,0:30:68.48:0,68,2457	0/0:34,0:34:90.23:0,90,3637	0/0:23,0:23:66.23:0,66,3027	1/1:11,6:33:45.15:3243,45,0	1/1:40,0:40:99:5662,108,0	0/0:25,0:25:69.24:0,69,3358	1/1:6,12:33:87.24:6234,87,0	1/1:2,8:20:39:2546,39,0	0/0:22,0:22:60.19:0,60,2904	0/0:28,0:28:81.25:0,81,3807	0/0:36,0:36:99:0,102,5030	1/1:7,15:29:66.23:5246,66,0	1/1:5,17:36:63.22:5297,63,0	1/1:3,6:19:24.08:1452,24,0	1/1:7,2:12:24.08:1825,24,0	1/1:8,2:25:75.18:3519,75,0	1/1:8,8:29:48.12:3666,48,0	1/1:13,3:26:30.10:2107,30,0	0/0:18,0:18:54.19:0,54,2488	0/0:20,0:20:54.14:0,54,2307	0/0:15,0:15:42.14:0,42,2072	1/1:12,14:39:72.25:5636,72,0	1/1:8,12:34:99:6882,99,0	1/1:13,12:37:71.85:5970,72,0	1/1:5,4:12:24.06:1462,24,0
chr10	84032193	.	T	TA	791.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.767;DP=600;FS=0.000;HRun=7;HaplotypeScore=63.1204;InbreedingCoeff=0.9905;MQ=68.83;MQ0=0;MQRankSum=-1.429;QD=28.25;ReadPosRankSum=-0.748;VQSLOD=3.8929;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:28:75.19:886,75,0	0/0:9,0:9:27.04:0,27,261	0/0:11,0:11:29.25:0,29,261	0/0:9,0:9:20.95:0,21,187	0/0:43,0:43:99:0,123,1175	0/0:22,0:22:63.10:0,63,608	0/0:13,0:13:33.03:0,33,313	0/0:34,0:34:84.11:0,84,805	0/0:21,0:21:54.06:0,54,515	0/0:41,0:41:99:0,117,1129	0/0:23,0:23:63.10:0,63,608	0/0:22,0:22:60.09:0,60,579	0/0:24,0:24:69.11:0,69,666	0/0:22,0:22:63.10:0,63,608	0/0:21,0:21:57.09:0,57,550	0/0:29,0:29:81.12:0,81,777	0/0:30,0:30:84.10:0,84,803	0/0:14,0:14:36.03:0,36,341	0/0:18,0:18:42.06:0,42,401	0/0:19,0:19:54.09:0,54,521	0/0:9,0:9:27.04:0,27,261	0/0:14,0:14:39.06:0,39,377	0/0:31,0:31:87.13:0,87,840	0/0:10,0:10:24.03:0,24,232	0/0:27,1:28:35.87:0,36,630	0/0:15,0:15:45.07:0,45,434	0/0:28,0:28:81.13:0,81,781	0/0:12,0:12:35.73:0,36,329
chr10	84032322	.	CAG	C	12274.65	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=17.052;DP=768;FS=12.986;HRun=0;HaplotypeScore=91.4559;InbreedingCoeff=0.9991;MQ=75.57;MQ0=0;MQRankSum=-0.394;QD=44.80;ReadPosRankSum=5.322;VQSLOD=5.6068;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,2947	1/1:0,8:8:21.07:343,21,0	0/0:21,0:21:63:0,63,1196	0/0:18,0:18:47.52:0,48,893	0/0:28,0:28:84.29:0,84,1704	0/0:26,0:26:78.27:0,78,1577	1/1:0,20:20:45.15:734,45,0	0/0:34,0:34:99:0,102,1986	0/0:21,0:21:63.20:0,63,1232	1/1:0,36:37:99:1731,108,0	1/1:0,21:21:57.19:930,57,0	0/0:39,0:39:99:0,117,2342	0/0:29,0:29:87.30:0,87,1729	0/0:38,0:38:99:0,114,2289	1/1:0,25:25:66.22:1077,66,0	1/1:0,32:32:93.32:1517,93,0	1/1:0,39:39:99:1860,114,0	1/1:0,29:29:78.27:1272,78,0	0/0:17,0:17:51.16:0,51,980	0/0:19,0:19:57.20:0,57,1158	0/0:49,0:49:99:0,147,2874	0/0:20,0:20:60.21:0,60,1208	0/0:25,0:25:72.25:0,72,1462	0/0:32,0:32:90.31:0,90,1827	1/1:0,29:29:81.28:1321,81,0	1/1:1,23:24:69.22:1098,69,0	0/0:28,0:28:84.27:0,84,1633	1/1:0,10:10:24.08:391,24,0
chr10	84032911	.	CG	C	570.42	PASS	AB=0.820;AC=21;AF=0.389;AN=54;BaseQRankSum=5.381;DP=427;FS=3.003;HRun=1;HaplotypeScore=67.3009;InbreedingCoeff=0.6370;MQ=62.57;MQ0=2;MQRankSum=-3.924;QD=4.83;ReadPosRankSum=-1.215;VQSLOD=0.0399;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:29.89:0,30,250	1/1:0,6:7:20.72:221,21,0	0/1:18,0:13:6.26:6,0,162	0/1:25,0:18:9.91:10,0,72	0/0:23,1:24:18.87:0,19,448	0/0:16,0:16:37.65:0,38,340	1/1:5,1:9:2.78:13,3,0	0/0:16,0:16:38.54:0,39,306	0/0:13,0:13:32.75:0,33,326	1/1:2,1:3:5.98:57,6,0	1/1:6,4:9:6.02:81,6,0	0/0:26,0:26:68.28:0,68,750	0/0:19,0:19:46.67:0,47,466	0/0:22,0:22:55.59:0,56,508	1/1:3,0:5:7.76:48,8,0	0/1:1,8:8:30.41:94,0,30	1/1:6,6:12:12:118,12,0	1/1:2,2:4:2.50:9,2,0	0/0:14,0:14:34.51:0,35,252	0/0:20,0:20:21.56:0,22,197	0/0:16,0:17:35.38:0,35,276	0/0:20,0:20:59.68:0,60,638	0/0:19,0:19:50.86:0,51,516	0/0:18,0:18:37.56:0,38,481	1/1:3,1:4:3.01:35,3,0	1/1:8,1:9:9.62:62,10,0	0/0:25,0:25:62.35:0,62,498	./.
chr10	84032912	.	GA	G	334.22	PASS	AB=0.979;AC=13;AF=0.232;AN=56;BaseQRankSum=1.095;DP=483;FS=0.000;HRun=16;HaplotypeScore=85.1103;InbreedingCoeff=0.2831;MQ=60.82;MQ0=2;MQRankSum=1.116;QD=2.18;ReadPosRankSum=3.854;VQSLOD=-0.6706;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,18:37:29.40:251,29,0	1/1:7,0:7:9.80:77,10,0	1/1:15,1:12:2.83:18,3,0	0/1:26,0:16:0.25:16,0,0	0/0:25,1:26:10.49:0,10,245	0/1:14,3:17:28.16:28,0,93	0/0:14,0:14:28.47:0,28,177	0/0:14,0:24:38.91:0,39,204	0/0:14,1:15:15.57:0,16,142	0/1:5,0:5:9.37:9,0,19	0/1:15,0:12:25.68:26,0,36	0/0:24,2:27:22.22:0,22,356	0/0:20,0:22:20.76:0,21,238	0/0:22,0:23:4.75:0,5,242	0/0:8,0:8:8.47:0,8,62	0/1:10,0:9:13.52:38,0,14	0/1:15,0:15:21.39:21,0,46	0/0:6,0:6:11.99:0,12,61	0/0:15,0:22:37.33:0,37,202	0/0:18,0:21:42.60:0,43,244	0/0:16,0:18:24.78:0,25,146	0/0:21,0:21:23.42:0,23,276	0/0:18,0:21:25.33:0,25,200	0/0:19,1:20:21.37:0,21,276	0/1:4,0:4:8.10:8,0,37	0/0:9,0:9:15.89:0,16,120	0/0:21,0:27:45.28:0,45,233	0/0:5,0:3:8.85:0,9,58
chr10	84032994	.	A	AACACACACAC	3906.13	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-5.430;DP=688;FS=3.213;HRun=0;HaplotypeScore=199.6538;InbreedingCoeff=0.8096;MQ=55.64;MQ0=7;MQRankSum=-6.109;QD=20.89;ReadPosRankSum=-7.272;VQSLOD=0.7380;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:42:76.29:0,76,2524	0/0:12,0:13:32.78:0,33,868	0/0:24,0:4:5.95:0,6,66	0/1:26,0:6:19.09:19,0,37	0/0:22,0:22:16.68:0,17,800	0/0:18,0:19:51.10:0,51,1279	0/0:32,0:32:69.14:0,69,1540	1/1:29,0:28:33.05:529,33,0	0/0:18,0:18:51.16:0,51,1303	0/0:25,0:27:61.95:0,62,1739	0/0:9,0:9:18.06:0,18,466	0/0:23,0:25:69.23:0,69,1955	0/0:22,0:23:57.10:0,57,1430	0/0:29,0:29:72.23:0,72,1901	0/0:25,0:25:61.03:0,61,1550	0/0:25,0:25:59.88:0,60,1386	0/0:36,0:36:86.29:0,86,2230	0/0:19,0:19:44.98:0,45,1245	1/1:10,12:29:80.03:1662,80,0	1/1:5,20:35:36.12:1035,36,0	1/1:10,15:38:12.04:209,12,0	0/0:16,0:17:38.94:0,39,767	0/0:12,0:12:32.98:0,33,851	0/0:38,0:38:92.35:0,92,2608	0/0:19,0:19:48.64:0,49,1407	0/0:16,0:16:3.23:0,3,748	1/1:3,17:25:8.88:452,9,0	0/0:10,0:11:27.09:0,27,703
chr10	84033252	.	CGTGTGT	C	1706.28	PASS	AB=0.882;AC=24;AF=0.480;AN=50;BaseQRankSum=6.767;DP=569;FS=0.000;HRun=0;HaplotypeScore=136.4230;InbreedingCoeff=0.4743;MQ=58.93;MQ0=9;MQRankSum=-6.681;QD=6.27;ReadPosRankSum=1.948;VQSLOD=2.3271;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:3.01:42,3,0	1/1:3,0:4:3.01:42,3,0	./.	./.	0/0:12,0:16:21.07:0,21,472	0/0:19,0:21:21.54:0,22,492	0/1:27,0:28:15.51:16,0,306	./.	0/1:15,1:17:33.51:34,0,654	1/1:21,4:25:11.64:228,12,0	1/1:6,4:9:2.97:20,3,0	0/0:27,0:28:47.26:0,47,1203	0/1:20,1:22:43.88:44,0,493	0/0:24,0:24:18.05:0,18,337	0/0:19,0:19:9.49:0,9,182	1/1:12,16:31:42.04:748,42,0	1/1:26,11:38:15.05:281,15,0	0/0:24,0:23:28.83:0,29,687	0/1:8,0:11:26.42:28,0,26	1/1:5,0:8:6.02:84,6,0	0/0:39,0:37:2:0,2,23	0/0:22,0:22:18.06:0,18,478	0/0:7,0:8:7.80:0,8,231	0/0:34,0:35:42.14:0,42,1222	0/0:14,0:14:9.02:0,9,173	1/1:20,0:25:11.89:144,12,0	1/1:6,0:15:10.39:129,10,0	1/1:4,0:6:3.01:47,3,0
chr10	84033280	.	TGTGTGTGTGTGTGTGTGTGC	T	1459.21	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=4.020;DP=606;FS=4.322;HRun=0;HaplotypeScore=256.4622;InbreedingCoeff=0.0660;MQ=49.31;MQ0=17;MQRankSum=-3.517;QD=10.35;ReadPosRankSum=1.725;VQSLOD=1.9135;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,31:37:3.75:173,4,0	0/0:8,0:8:17.98:0,18,461	0/1:13,0:2:0.82:1,0,38	0/0:7,0:2:5.89:0,6,82	0/0:15,0:15:24.08:0,24,1469	0/0:22,0:21:43.54:0,44,2735	0/0:29,0:28:53.54:0,54,2332	0/1:11,0:10:30.16:30,0,66	0/0:25,0:25:57.22:0,57,3794	0/0:26,0:26:77.93:0,78,2315	0/0:7,0:7:2.07:0,2,186	0/0:34,0:33:72.20:0,72,4837	0/0:16,0:16:45.05:0,45,2696	0/0:23,0:19:42.13:0,42,1787	0/0:21,0:21:13.74:0,14,516	0/0:27,0:26:57.17:0,57,2174	0/0:44,0:44:64.85:0,65,2130	0/0:26,0:25:71.89:0,72,2637	0/1:14,0:13:88.16:311,0,88	0/1:11,0:11:9.53:283,0,10	0/1:41,0:36:99:178,0,273	0/0:25,0:24:48.04:0,48,2456	0/0:17,0:17:39.03:0,39,2275	0/0:42,0:40:96.28:0,96,5876	0/0:14,0:14:15.03:0,15,814	0/0:29,0:28:72.25:0,72,1856	0/1:14,0:14:36.85:609,0,37	0/0:8,0:8:21.05:0,21,552
chr10	84033298	.	T	TGCGC	162.64	PASS	AB=0.986;AC=8;AF=0.143;AN=56;BaseQRankSum=1.609;DP=575;FS=15.748;HRun=0;HaplotypeScore=127.5555;InbreedingCoeff=0.2830;MQ=51.89;MQ0=10;MQRankSum=0.742;QD=1.41;ReadPosRankSum=-1.568;VQSLOD=1.0506;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:3.48:0,3,29	0/0:9,0:9:7.58:0,8,33	0/0:12,0:3:6.41:0,6,43	0/0:7,0:4:6.83:0,7,55	0/0:12,0:12:14.89:0,15,211	0/0:20,0:20:44.86:0,45,678	0/1:25,0:24:19.01:19,0,50	0/0:19,0:18:39.12:0,39,600	0/0:26,0:26:69.06:0,69,1020	0/1:20,0:20:19.43:19,0,40	0/0:8,0:8:8.73:0,9,45	0/0:29,0:29:57.18:0,57,876	0/0:15,0:15:32.92:0,33,443	0/0:20,0:16:27.09:0,27,405	1/1:5,0:23:6.47:81,6,0	0/0:27,0:26:38.60:0,39,289	0/0:42,0:42:36.46:0,36,173	0/1:16,0:17:0.77:1,0,118	0/0:19,0:17:39.04:0,39,535	0/0:16,0:16:17.82:0,18,208	0/0:47,0:42:68.62:0,69,995	0/0:17,0:16:27.06:0,27,404	0/0:17,0:17:39.08:0,39,506	0/0:43,0:41:99:0,99,1540	1/1:3,10:13:6.02:119,6,0	0/1:17,0:16:49.77:50,0,69	0/0:17,0:17:30.10:0,30,420	0/0:5,0:5:3.90:0,4,12
chr10	84034859	.	AT	A	3903.55	PASS	AB=0.953;AC=32;AF=0.571;AN=56;BaseQRankSum=11.930;DP=669;FS=3.831;HRun=12;HaplotypeScore=88.1311;InbreedingCoeff=0.8523;MQ=81.74;MQ0=1;MQRankSum=-1.790;QD=9.52;ReadPosRankSum=3.012;VQSLOD=3.2551;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,39:44:99:789,102,0	1/1:2,0:11:18.32:54,18,0	0/1:19,1:20:2.08:2,0,137	0/1:19,1:19:0.54:1,0,87	0/0:30,2:32:32.66:0,33,662	0/0:23,0:26:49.89:0,50,499	1/1:7,12:20:2.49:145,2,0	1/1:7,29:36:83.60:644,84,0	0/0:27,0:28:68.94:0,69,667	1/1:6,0:29:37.55:116,38,0	1/1:2,0:22:28.48:84,28,0	0/0:25,0:25:33.80:0,34,498	0/0:17,1:18:18.85:0,19,367	0/0:18,0:18:45.08:0,45,452	0/0:35,0:37:90:0,90,888	1/1:3,0:24:38.70:114,39,0	1/1:3,0:25:42.77:126,43,0	0/0:11,0:11:24.03:0,24,233	1/1:6,20:28:16.88:377,17,0	1/1:3,22:25:49.78:378,50,0	1/1:2,20:23:55.83:424,56,0	0/0:10,1:14:6.47:0,6,207	0/0:24,0:24:54.09:0,54,541	0/0:26,0:26:60:0,60,580	1/1:1,0:17:30.56:88,31,0	1/1:7,1:30:44.97:130,45,0	1/1:3,25:29:6.90:409,7,0	1/1:0,0:5:8.15:23,8,0
chr10	84036516	.	T	TA	1040.93	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-4.877;DP=662;FS=0.000;HRun=8;HaplotypeScore=66.9619;InbreedingCoeff=0.8483;MQ=71.77;MQ0=0;MQRankSum=-0.955;QD=21.69;ReadPosRankSum=-0.287;VQSLOD=3.6101;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,120,1098	0/0:6,0:6:15.01:0,15,137	0/0:21,0:21:50.97:0,51,451	0/1:8,0:8:0.57:1,0,112	0/0:19,0:19:38.91:0,39,348	0/0:18,0:18:41.95:0,42,371	0/0:17,0:17:48.02:0,48,439	0/0:27,0:27:69.02:0,69,628	0/0:25,0:25:62.99:0,63,569	0/0:31,0:31:86.72:0,87,779	0/0:18,0:18:38.97:0,39,351	0/0:19,0:19:57:0,57,511	0/0:31,0:31:87.04:0,87,796	0/0:18,0:19:56.97:0,57,512	0/0:24,0:24:59.94:0,60,531	0/0:39,0:39:99:0,102,921	0/0:18,0:18:53.05:0,53,467	0/0:18,0:18:54.03:0,54,494	0/0:22,0:22:60.02:0,60,549	0/0:36,0:36:99:0,105,956	0/0:27,0:27:81.03:0,81,735	0/0:21,0:21:56.98:0,57,510	0/0:20,0:20:47.99:0,48,432	0/0:30,0:30:72.03:0,72,659	0/0:19,0:19:48.01:0,48,435	1/1:4,23:27:44.75:769,45,0	0/0:42,0:42:99:0,111,990	1/1:1,12:13:11.65:388,12,0
chr10	84038071	.	CGCGTGTGTGTGTGT	C	2386.73	PASS	AB=0.967;AC=5;AF=0.089;AN=56;BaseQRankSum=5.080;DP=562;FS=4.897;HRun=0;HaplotypeScore=199.5176;InbreedingCoeff=0.3935;MQ=75.69;MQ0=19;MQRankSum=-6.268;QD=27.75;ReadPosRankSum=1.125;VQSLOD=2.4962;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:46.84:0,47,606	0/0:10,0:10:17.66:0,18,180	0/0:33,0:23:68.26:0,68,605	0/0:39,0:33:88.57:0,89,844	0/0:13,0:12:29.76:0,30,837	0/0:11,0:11:26.90:0,27,845	0/0:27,0:27:51.92:0,52,698	0/0:34,0:33:95.83:0,96,1347	0/0:19,0:18:50.87:0,51,1579	0/0:16,0:15:44.27:0,44,966	0/0:13,0:13:20.68:0,21,291	0/0:17,0:17:35.96:0,36,1441	0/0:17,0:17:50.78:0,51,1143	0/0:22,0:21:41.96:0,42,763	1/1:1,26:27:36.12:1367,36,0	0/0:23,0:23:44:0,44,668	0/0:23,0:22:55.28:0,55,698	0/1:24,2:26:6.68:744,0,7	0/0:12,0:12:32.85:0,33,221	0/0:7,0:7:17.80:0,18,218	0/0:18,0:16:44.77:0,45,679	0/0:12,0:12:24.07:0,24,1136	0/0:14,0:13:29.97:0,30,1112	0/0:27,0:26:69.42:0,69,2606	0/0:22,0:20:31.90:0,32,491	0/1:21,0:21:99:155,0,334	0/0:24,0:24:62.42:0,62,1482	0/1:11,0:10:99:245,0,120
chr10	84038073	.	CGTGT	C	814.16	PASS	AB=0.977;AC=28;AF=0.538;AN=52;BaseQRankSum=6.294;DP=574;FS=7.427;HRun=0;HaplotypeScore=110.2419;InbreedingCoeff=0.4847;MQ=71.93;MQ0=21;MQRankSum=-3.989;QD=2.82;ReadPosRankSum=1.619;VQSLOD=1.5381;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:23:2.20:12,2,0	1/1:5,0:9:3:28,3,0	./.	./.	0/0:13,0:12:6.02:0,6,113	0/0:11,0:11:12.04:0,12,220	0/0:22,5:27:0.33:0,0,1	0/0:37,0:35:0:0,0,0	0/1:20,0:19:9.81:10,0,299	1/1:16,0:15:3.47:29,3,0	1/1:9,0:11:3:28,3,0	0/0:17,0:17:18.06:0,18,361	0/0:20,0:19:14.87:0,15,289	0/0:21,0:20:3.01:0,3,43	1/1:27,0:27:27.91:253,28,0	1/1:18,0:22:5.84:42,6,0	0/1:23,0:22:13.41:41,0,13	1/1:28,0:27:3.16:51,3,0	0/0:13,0:13:1.25:0,1,3	1/1:8,0:8:2.84:14,3,0	1/1:19,0:17:3.01:46,3,0	0/0:13,0:13:14.77:0,15,236	0/0:14,0:13:15.02:0,15,259	0/0:30,0:30:43.37:0,43,718	1/1:18,0:20:6.01:56,6,0	1/1:14,0:20:6.01:56,6,0	1/1:23,6:29:14.82:229,15,0	1/1:8,0:10:9.01:84,9,0
chr10	84038921	.	GA	G	2971.21	PASS	AB=0.816;AC=17;AF=0.304;AN=56;BaseQRankSum=11.279;DP=603;FS=1.583;HRun=11;HaplotypeScore=64.3041;InbreedingCoeff=0.7712;MQ=65.91;MQ0=0;MQRankSum=-0.521;QD=15.64;ReadPosRankSum=3.440;VQSLOD=4.4085;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:48.98:0,49,499	0/1:3,7:10:17.01:84,0,17	0/1:16,1:15:3.07:3,0,164	0/1:10,1:9:17.68:18,0,26	0/0:21,0:21:57.08:0,57,573	0/0:22,2:24:32.44:0,32,531	0/0:22,0:22:51.12:0,51,537	0/0:36,2:39:52.78:0,53,932	0/0:30,0:30:69.13:0,69,713	1/1:2,19:22:55.97:449,56,0	1/1:5,14:19:38.07:318,38,0	0/0:27,1:28:47.54:0,48,711	0/0:18,1:19:20.19:0,20,397	0/0:15,0:16:38.93:0,39,398	0/0:29,2:31:22.88:0,23,639	1/1:3,24:27:30.94:461,31,0	1/1:2,25:27:74.91:615,75,0	0/0:17,0:17:45.11:0,45,480	0/0:21,0:22:59.76:0,60,574	0/0:22,0:22:51.12:0,51,537	0/0:18,0:18:39.09:0,39,409	0/0:16,0:16:45.11:0,45,473	0/0:15,0:15:45.08:0,45,458	0/0:18,0:18:45.11:0,45,480	1/1:1,21:22:56.93:468,57,0	1/1:1,25:27:76.93:621,77,0	0/0:31,3:33:16.52:0,17,740	1/1:1,5:8:19.06:135,19,0
chr10	84040012	.	GGAGA	G	4337.65	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.857;DP=809;FS=0.929;HRun=0;HaplotypeScore=138.6456;InbreedingCoeff=0.9997;MQ=82.43;MQ0=0;MQRankSum=-2.591;QD=51.03;ReadPosRankSum=2.975;VQSLOD=5.8367;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,2884	0/0:10,0:10:30.10:0,30,802	0/0:28,0:28:78.90:0,79,1947	0/0:26,0:26:68.97:0,69,1669	0/0:26,0:26:69.24:0,69,1874	0/0:21,0:21:60.21:0,60,1585	0/0:25,0:25:72.23:0,72,1857	0/0:37,0:37:99:0,108,2931	0/0:29,0:29:87.30:0,87,2332	0/0:38,0:38:99:0,111,2938	0/0:29,0:29:78.27:0,78,2060	0/0:34,0:34:99:0,102,2721	1/1:0,27:27:63.22:1221,63,0	1/1:0,27:27:78.27:1511,78,0	0/0:49,0:49:99:0,147,3862	0/0:39,0:39:99:0,117,3145	0/0:32,0:32:93.32:0,93,2504	0/0:15,0:15:45.15:0,45,1129	0/0:16,0:16:42.14:0,42,1135	0/0:37,0:37:99:0,108,2915	0/0:30,0:30:90.29:0,90,2367	1/1:1,30:31:84.29:1606,84,0	0/0:27,0:27:72.25:0,72,1930	0/0:30,0:30:87.30:0,87,2349	0/0:26,0:26:78.27:0,78,2135	0/0:38,0:38:99:0,111,2927	0/0:34,0:33:99:0,102,2793	0/0:11,0:11:33.11:0,33,904
chr10	84040302	.	C	CT	1981.99	PASS	AB=0.990;AC=35;AF=0.625;AN=56;BaseQRankSum=-8.486;DP=660;FS=186.661;HRun=2;HaplotypeScore=357.7687;InbreedingCoeff=-0.1452;MQ=60.02;MQ0=0;MQRankSum=10.176;QD=3.31;ReadPosRankSum=-7.365;VQSLOD=-0.5940;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:6.28:8,0,6	0/1:12,0:12:2.68:59,0,3	0/1:10,0:10:6.83:7,0,160	0/0:18,1:19:11.47:0,11,389	0/1:29,0:29:32.21:34,0,32	0/1:41,0:41:13.87:48,0,14	1/1:13,0:13:1.99:40,2,0	1/1:47,1:48:99:651,111,0	0/0:22,0:22:1.98:0,2,16	1/1:23,0:23:27.27:169,27,0	0/0:20,0:20:10.93:0,11,41	0/1:29,0:29:9.42:56,0,9	0/1:31,2:33:9.16:94,0,9	0/1:29,0:29:13.32:44,0,13	0/1:31,0:30:8.25:67,0,8	1/1:33,0:33:3.22:104,3,0	1/1:15,0:15:3.03:23,3,0	1/1:9,0:9:1.49:4,1,0	1/1:17,1:18:33.07:211,33,0	0/1:28,1:29:10.54:75,0,11	1/1:9,0:9:3.23:19,3,0	0/1:26,1:27:19.26:112,0,19	0/1:29,0:29:24.32:54,0,24	0/1:9,0:9:0.87:1,0,7	0/1:23,0:23:9.52:30,0,10	1/1:25,0:25:25.63:108,26,0	0/1:34,0:35:25.86:29,0,26	1/1:20,0:20:24.05:91,24,0
chr10	84040907	.	C	CT	1380.80	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.585;DP=752;FS=0.000;HRun=4;HaplotypeScore=72.8494;InbreedingCoeff=0.9979;MQ=88.25;MQ0=0;MQRankSum=-1.662;QD=36.34;ReadPosRankSum=0.871;VQSLOD=3.7805;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1497	0/0:13,0:13:39.09:0,39,430	0/0:35,0:35:69.54:0,70,888	0/0:29,0:28:57.27:0,57,737	0/0:20,0:20:60.17:0,60,680	0/0:25,0:25:72.21:0,72,817	0/0:22,0:22:63.16:0,63,705	0/0:40,0:40:99:0,105,1182	0/0:19,0:19:57.16:0,57,646	0/0:22,0:22:60.15:0,60,664	0/0:21,0:21:57.14:0,57,637	0/0:27,0:27:81.23:0,81,919	0/0:30,0:30:87.25:0,87,987	0/0:23,0:23:69.17:0,69,763	0/0:43,0:43:99:0,123,1394	0/0:28,0:28:84.22:0,84,943	0/0:28,0:28:81.23:0,81,918	0/0:20,0:20:57.16:0,57,646	0/0:20,0:20:54.15:0,54,613	0/0:25,0:25:72.20:0,72,817	0/0:39,0:39:99:0,111,1259	0/0:20,0:20:57.16:0,57,646	0/0:27,0:27:75.21:0,75,851	0/0:35,0:35:90.22:0,90,1000	0/0:27,0:27:75.19:0,75,839	1/1:1,30:31:90.28:1214,90,0	0/0:31,0:31:93.27:0,93,1054	1/1:0,7:7:21.07:287,21,0
chr10	84041528	.	CA	C	1037.68	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.019;DP=798;FS=2.478;HRun=1;HaplotypeScore=126.4058;InbreedingCoeff=0.9684;MQ=75.79;MQ0=0;MQRankSum=-3.150;QD=37.06;ReadPosRankSum=0.929;VQSLOD=3.3529;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,160,2512	0/0:9,0:9:27.07:0,27,407	0/0:16,1:17:27.80:0,28,662	0/0:19,0:19:54.18:0,54,807	0/0:27,0:27:81.26:0,81,1272	0/0:18,0:18:54.18:0,54,861	0/0:41,0:41:99:0,123,1891	0/0:43,0:43:99:0,129,1980	0/0:28,0:28:84.27:0,84,1317	0/0:24,0:24:72.25:0,72,1151	0/0:27,0:27:78.27:0,78,1238	0/0:30,0:30:90.31:0,90,1436	0/0:29,0:29:87.28:0,87,1363	0/0:39,0:39:99:0,114,1793	0/0:45,0:45:99:0,135,2085	0/0:33,0:33:99:0,99,1557	0/0:27,0:27:81.25:0,81,1264	0/0:34,0:34:99:0,102,1604	0/0:19,0:19:57.19:0,57,912	0/0:20,0:20:60.20:0,60,959	0/0:55,0:55:99:0,165,2520	0/0:29,0:29:84.27:0,84,1320	0/0:16,0:16:48.16:0,48,767	0/0:24,0:24:72.20:0,72,1123	1/1:0,28:28:81.27:1133,81,0	0/0:33,0:33:99:0,99,1558	0/0:27,0:27:81.24:0,81,1243	0/0:4,0:4:12.02:0,12,168
chr10	84043512	.	G	GAAT	96.01	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.442;DP=663;FS=3.792;HRun=0;HaplotypeScore=102.7188;InbreedingCoeff=0.9436;MQ=66.46;MQ0=1;MQRankSum=-1.548;QD=24.00;ReadPosRankSum=-0.516;VQSLOD=3.3818;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,160,2866	0/0:13,0:13:39.13:0,39,727	0/0:23,0:20:12.96:0,13,738	0/0:30,0:28:74.65:0,75,1250	0/0:20,0:20:57.18:0,57,1022	0/0:20,0:20:60.19:0,60,1089	0/0:28,0:28:84.27:0,84,1534	0/0:35,0:35:99:0,105,1915	0/0:19,0:19:57.19:0,57,1022	0/0:29,0:29:87.29:0,87,1590	0/0:11,0:11:33.11:0,33,612	0/0:25,0:25:75.25:0,75,1372	0/0:25,0:25:72.25:0,72,1335	0/0:29,0:29:87.30:0,87,1619	0/0:22,0:22:66.23:0,66,1231	0/0:24,0:24:69.22:0,69,1239	0/0:31,0:31:93.32:0,93,1727	0/0:18,0:18:54.19:0,54,998	0/0:36,0:36:66.13:0,66,1802	0/0:13,0:13:36.12:0,36,671	0/0:28,0:28:75.26:0,75,1398	0/0:19,0:19:57.20:0,57,1057	0/0:20,0:20:60.18:0,60,1058	0/0:16,0:16:45.15:0,45,839	1/1:0,4:4:12.01:182,12,0	0/0:31,0:30:93.32:0,93,1731	0/0:20,0:20:54.16:0,54,947	0/0:20,0:20:60.10:0,60,985
chr10	84043513	.	G	GATCTATGCCTGGTGCT	710.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.066;DP=661;FS=3.774;HRun=0;HaplotypeScore=279.7841;InbreedingCoeff=0.9564;MQ=65.74;MQ0=1;MQRankSum=-1.861;QD=142.01;ReadPosRankSum=0.285;VQSLOD=3.1227;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,159,6708	0/0:13,0:13:39.13:0,39,1816	0/0:22,0:19:16.30:0,16,1585	0/0:31,0:28:73.89:0,74,2715	0/0:19,0:19:54.19:0,54,2510	0/0:20,0:20:60.21:0,60,2687	0/0:27,0:27:81.28:0,81,3806	0/0:35,0:35:99:0,105,4513	0/0:18,0:18:54.17:0,54,2282	0/0:29,0:29:84.28:0,84,3713	0/0:12,0:12:33.11:0,33,1412	0/0:25,0:25:75.26:0,75,3486	0/0:24,0:24:72.23:0,72,3228	0/0:30,0:30:87.30:0,87,4006	0/0:22,0:22:66.23:0,66,3100	0/0:23,0:23:66.23:0,66,3021	0/0:31,0:31:93.32:0,93,4315	0/0:18,0:18:54.19:0,54,2467	0/0:37,0:37:69.11:0,69,4283	0/0:13,0:13:36.12:0,36,1682	0/0:28,0:28:78.24:0,78,3578	0/0:19,0:19:57.20:0,57,2372	0/0:19,0:19:57.20:0,57,2608	0/0:17,0:17:45.15:0,45,2090	1/1:1,4:5:12.04:796,12,0	0/0:31,0:30:93.32:0,93,4317	0/0:20,0:20:57.18:0,57,2444	0/0:20,0:20:57.19:0,57,2287
chr10	84043517	.	A	ATCTAT	194.91	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.812;DP=663;FS=7.415;HRun=0;HaplotypeScore=127.7318;InbreedingCoeff=0.9832;MQ=64.15;MQ0=1;MQRankSum=-2.606;QD=38.98;ReadPosRankSum=0.465;VQSLOD=3.3767;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,153,3512	0/0:13,0:13:39.13:0,39,858	0/0:22,0:19:52.01:0,52,1049	0/0:31,0:26:69.71:0,70,1516	0/0:19,0:19:54.17:0,54,1213	0/0:23,0:23:69.22:0,69,1495	0/0:30,0:30:90.31:0,90,2068	0/0:39,0:39:99:0,108,2377	0/0:15,0:15:45.15:0,45,1049	0/0:28,0:28:84.29:0,84,1931	0/0:10,0:10:30.10:0,30,695	0/0:23,0:23:69.24:0,69,1608	0/0:23,0:23:69.24:0,69,1608	0/0:29,0:29:87.28:0,87,1953	0/0:22,0:22:63.22:0,63,1468	0/0:25,0:25:72.25:0,72,1633	0/0:32,0:32:96.31:0,96,2190	0/0:18,0:18:51.18:0,51,1189	0/0:35,0:35:99:0,105,2395	0/0:12,0:12:36.12:0,36,835	0/0:29,0:29:81.28:0,81,1858	0/0:16,0:16:45.15:0,45,1048	0/0:19,0:19:57.20:0,57,1324	0/0:19,0:19:54.15:0,54,1135	1/1:1,4:5:15.02:283,15,0	0/0:31,0:30:90.31:0,90,2096	0/0:20,0:20:57.20:0,57,1328	0/0:19,0:19:57.20:0,57,1328
chr10	84043518	.	G	GA	170.16	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.016;DP=680;FS=8.558;HRun=1;HaplotypeScore=89.3589;InbreedingCoeff=0.9992;MQ=64.23;MQ0=1;MQRankSum=-6.703;QD=7.73;ReadPosRankSum=1.887;VQSLOD=0.5504;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,162,2188	0/0:13,0:13:39.09:0,39,508	0/0:23,0:19:51.15:0,51,672	0/0:31,0:26:71.18:0,71,881	0/0:19,0:19:51.17:0,51,712	0/0:23,0:23:69.22:0,69,944	0/0:30,0:30:90.30:0,90,1256	0/0:39,0:39:99:0,117,1569	0/0:16,0:16:45.15:0,45,629	0/0:28,0:28:84.27:0,84,1161	0/0:10,0:10:30.10:0,30,419	0/0:23,0:23:69.23:0,69,962	0/0:23,0:23:69.23:0,69,962	0/0:28,0:28:84.26:0,84,1155	0/0:22,0:22:66.20:0,66,905	0/0:25,0:25:72.24:0,72,1004	0/0:32,0:32:96.32:0,96,1340	0/0:17,0:17:51.17:0,51,713	0/0:35,0:35:99:0,105,1452	0/0:12,0:12:36.12:0,36,503	0/0:30,0:30:81.25:0,81,1114	0/0:16,0:16:45.15:0,45,629	0/0:19,0:19:57.19:0,57,796	0/0:19,0:19:51.17:0,51,710	1/1:18,4:22:45.14:265,45,0	0/0:31,0:30:90.30:0,90,1259	0/0:21,0:21:57.19:0,57,797	0/0:19,0:19:57.19:0,57,794
chr10	84043710	.	A	AGAATC	25752.49	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-13.841;DP=746;FS=2.378;HRun=0;HaplotypeScore=128.7610;InbreedingCoeff=0.9987;MQ=79.23;MQ0=0;MQRankSum=-10.678;QD=72.75;ReadPosRankSum=0.151;VQSLOD=6.4433;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,34:40:99:2983,99,0	1/1:1,7:10:21.07:653,21,0	0/0:27,0:27:75.25:0,75,1558	0/0:16,0:16:36.34:0,36,744	0/0:32,0:31:78.13:0,78,1522	0/0:21,0:21:63.20:0,63,1308	0/0:31,0:31:93.31:0,93,1946	1/1:7,22:32:84.24:2261,84,0	0/0:20,0:20:54.18:0,54,1121	1/1:5,24:30:84.26:2404,84,0	1/1:2,13:18:27.09:803,27,0	0/0:32,0:32:96.33:0,96,2043	0/0:26,0:26:75.22:0,75,1546	0/0:35,0:35:99:0,99,2093	0/0:27,0:27:78.25:0,78,1635	1/1:0,25:26:66.23:2090,66,0	1/1:5,29:38:87.30:2713,87,0	0/0:26,0:26:69.23:0,69,1459	1/1:7,11:19:45.06:1081,45,0	1/1:3,27:31:84.25:2571,84,0	1/1:9,24:36:69.24:2040,69,0	0/0:27,0:27:72.24:0,72,1508	0/0:30,0:30:87.23:0,87,1823	0/0:42,0:42:99:0,120,2424	1/1:0,9:10:21.07:620,21,0	1/1:4,24:29:81.25:2415,81,0	1/1:3,16:19:54.19:1699,54,0	1/1:2,14:16:45.15:1420,45,0
chr10	84044882	.	A	ACGCG	312.31	PASS	AB=0.573;AC=3;AF=0.054;AN=56;BaseQRankSum=2.843;DP=581;FS=30.087;HRun=0;HaplotypeScore=127.1092;InbreedingCoeff=0.4043;MQ=71.65;MQ0=8;MQRankSum=0.052;QD=5.58;ReadPosRankSum=-2.827;VQSLOD=0.4774;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:0.81:0,1,14	0/0:9,0:8:14.77:0,15,236	0/0:14,0:12:5.37:0,5,33	0/0:13,0:14:10:0,10,69	0/0:20,0:20:31.66:0,32,461	0/0:17,0:17:30.09:0,30,455	0/0:41,0:41:53.59:0,54,845	0/0:2,0:11:24.74:0,25,232	0/0:17,0:17:36.12:0,36,567	0/0:23,0:23:51.16:0,51,778	0/0:10,0:8:12.04:0,12,184	0/0:24,0:24:39.07:0,39,600	0/0:15,0:15:32.66:0,33,524	0/0:25,0:25:54.16:0,54,823	1/1:13,0:13:18.42:172,18,0	0/0:13,0:13:33.09:0,33,482	0/0:35,0:34:72.24:0,72,1088	0/1:11,30:43:27.73:243,0,28	0/0:18,0:18:13.93:0,14,228	0/0:18,0:17:27.02:0,27,334	0/0:30,0:28:19.48:0,19,447	0/0:17,0:17:38.98:0,39,512	0/0:17,0:16:18.06:0,18,287	0/0:26,0:26:69.11:0,69,998	0/0:19,0:19:39.11:0,39,550	0/0:16,0:16:32.58:0,33,437	0/0:13,0:13:17.99:0,18,222	0/0:14,0:14:0.09:0,0,405
chr10	84044888	.	G	GCA	162.25	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=4.599;DP=575;FS=1.955;HRun=0;HaplotypeScore=100.0363;InbreedingCoeff=0.3132;MQ=61.11;MQ0=10;MQRankSum=0.225;QD=1.08;ReadPosRankSum=-2.412;VQSLOD=1.7440;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:53.73:0,54,693	0/0:7,0:6:15.05:0,15,216	0/1:8,0:6:1.59:2,0,101	0/1:11,0:8:21.23:36,0,21	0/0:17,0:17:36.08:0,36,468	0/0:17,0:16:33.03:0,33,428	0/0:44,0:44:71.69:0,72,911	0/1:14,0:12:10.20:30,0,10	0/0:19,0:19:39.08:0,39,532	0/0:22,0:22:60.16:0,60,807	0/0:13,0:11:17.94:0,18,215	0/0:30,0:30:50.76:0,51,638	0/0:16,0:16:35.98:0,36,499	0/0:25,0:25:61.06:0,61,815	0/0:14,0:14:7.98:0,8,49	0/0:14,0:14:39.10:0,39,507	0/0:38,0:37:92.94:0,93,1148	0/1:44,0:44:6.75:7,0,79	0/1:14,0:14:19.44:62,0,19	1/1:16,1:16:1.67:55,2,0	1/1:29,0:27:4.57:48,5,0	0/0:16,0:16:45.09:0,45,597	0/0:14,0:13:24.05:0,24,306	0/0:31,0:30:69.67:0,70,956	0/0:20,0:20:39.13:0,39,527	0/0:14,0:14:36.96:0,37,443	1/1:6,7:13:2.78:57,3,0	0/0:14,0:14:40.82:0,41,447
chr10	84044892	.	GCA	G	546.85	PASS	AB=0.946;AC=20;AF=0.385;AN=52;BaseQRankSum=3.635;DP=586;FS=3.714;HRun=0;HaplotypeScore=96.5890;InbreedingCoeff=0.3288;MQ=55.05;MQ0=11;MQRankSum=2.632;QD=1.62;ReadPosRankSum=0.664;VQSLOD=1.8699;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:0.51:1,0,1	0/1:8,0:7:0:0,0,0	./.	./.	0/0:14,0:14:5.84:0,6,39	0/1:22,0:21:12.15:47,0,12	1/1:26,12:39:2.71:32,3,0	0/0:23,0:21:26.54:0,27,168	0/1:17,4:21:5.49:5,0,245	1/1:21,0:21:5.28:51,5,0	1/1:13,0:11:2.99:23,3,0	0/1:27,0:28:2.60:3,0,189	0/1:16,0:16:4.19:4,0,142	0/1:26,3:29:8.59:9,0,199	0/0:17,0:17:15.01:0,15,173	1/1:15,0:15:17.91:144,18,0	1/1:37,0:36:41.59:333,42,0	0/0:39,0:40:19.70:0,20,163	0/0:13,0:14:8.93:0,9,66	0/0:16,0:15:6.01:0,6,68	0/0:36,0:33:12.03:0,12,155	0/0:16,0:16:18.06:0,18,259	0/0:12,0:11:5.63:0,6,59	0/1:24,5:29:34.97:35,0,284	1/1:20,0:20:2.84:14,3,0	0/0:18,0:18:14.69:0,15,102	0/0:15,0:15:5.90:0,6,41	0/0:15,0:15:12:0,12,117
chr10	84045647	.	TCACAAGA	T	10665.75	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.307;DP=610;FS=2.547;HRun=0;HaplotypeScore=146.5073;InbreedingCoeff=0.9786;MQ=85.93;MQ0=2;MQRankSum=-14.685;QD=62.01;ReadPosRankSum=0.538;VQSLOD=4.8025;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:40:84.25:2238,84,0	1/1:0,5:5:12.04:335,12,0	0/0:21,0:21:63.13:0,63,1665	0/0:26,0:26:75.22:0,75,2518	0/0:25,0:25:75.26:0,75,2822	0/0:22,0:22:66.21:0,66,2550	0/0:31,0:31:93.32:0,93,3652	0/0:15,0:15:42.14:0,42,1582	0/0:17,0:17:51.16:0,51,1962	1/1:0,20:20:57.19:1463,57,0	1/1:1,15:15:42.14:1050,42,0	0/0:31,0:31:93.31:0,93,3625	0/0:23,0:23:69.22:0,69,2697	0/0:19,0:19:54.19:0,54,2183	0/0:27,0:27:81.28:0,81,3231	1/1:0,14:14:33.11:920,33,0	1/1:1,26:26:45.15:1230,45,0	0/0:25,0:25:75.26:0,75,3088	0/0:25,0:25:75.26:0,75,2891	0/0:17,0:17:51.18:0,51,2117	0/0:32,0:32:96.29:0,96,3692	0/0:18,0:18:54.17:0,54,2086	0/0:18,0:18:54.19:0,54,2236	0/0:21,0:21:63.22:0,63,2593	1/1:0,16:16:42.14:1129,42,0	1/1:0,29:29:84.28:2133,84,0	0/0:25,0:25:75.24:0,75,2930	1/1:0,5:5:6.02:168,6,0
chr10	84046666	.	AAAAAAAAC	A	1116.75	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=7.798;DP=575;FS=0.755;HRun=0;HaplotypeScore=146.1432;InbreedingCoeff=0.4492;MQ=62.46;MQ0=7;MQRankSum=-5.322;QD=10.84;ReadPosRankSum=-0.028;VQSLOD=2.3357;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:98.32:264,0,98	0/0:10,0:10:30.09:0,30,1188	0/1:41,0:15:13.35:13,0,551	0/0:38,0:17:26.37:0,26,422	0/0:21,0:21:57.16:0,57,1559	0/0:15,0:14:42.10:0,42,1549	0/0:19,0:19:57.20:0,57,2121	0/0:32,0:32:93.17:0,93,3041	0/0:13,0:13:39.13:0,39,1366	0/0:19,0:19:57.20:0,57,2228	0/0:10,0:10:30.10:0,30,1260	0/0:27,0:26:78.25:0,78,2708	0/0:13,0:13:39.12:0,39,1330	0/0:32,0:32:96.33:0,96,3607	0/0:23,0:23:69.21:0,69,2406	0/0:22,0:22:66.22:0,66,2191	0/0:28,0:28:68.88:0,69,2969	0/0:19,0:19:57.20:0,57,2060	0/0:17,0:16:42.14:0,42,1607	0/0:14,0:14:42.14:0,42,1600	0/0:23,0:23:69.24:0,69,2816	0/0:15,0:15:45.14:0,45,1656	0/0:15,0:15:45.15:0,45,1561	0/0:30,0:30:87.77:0,88,3287	1/1:9,8:17:48.14:938,48,0	0/1:17,0:16:8.04:8,0,142	0/0:17,0:17:51.17:0,51,2067	1/1:1,0:1:2.99:23,3,0
chr10	84046668	.	AAAAAAC	A	1093.35	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=9.975;DP=577;FS=5.576;HRun=0;HaplotypeScore=123.9912;InbreedingCoeff=0.8237;MQ=60.72;MQ0=8;MQRankSum=-5.175;QD=17.63;ReadPosRankSum=-0.670;VQSLOD=2.7219;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,4:27:35.04:485,35,0	0/0:9,0:9:27.09:0,27,962	0/0:40,0:14:19.73:0,20,452	0/0:35,0:14:22.01:0,22,248	0/0:19,0:19:54.18:0,54,1413	0/0:15,0:14:39.12:0,39,1314	0/0:20,0:20:60.21:0,60,1841	0/0:33,0:33:96.27:0,96,2658	0/0:12,0:12:36.12:0,36,1170	0/0:19,0:19:57.19:0,57,1847	0/0:10,0:10:30.10:0,30,1084	0/0:26,0:25:75.26:0,75,2362	0/0:13,0:13:39.12:0,39,1135	0/0:32,0:32:96.31:0,96,3087	0/0:22,0:22:66.21:0,66,2072	0/0:21,0:21:63.21:0,63,1902	0/0:28,0:28:68.86:0,69,2512	0/0:22,0:22:66.23:0,66,1940	0/0:18,0:17:45.15:0,45,1434	0/0:14,0:14:42.13:0,42,1324	0/0:25,0:25:75.26:0,75,2435	0/0:15,0:15:45.14:0,45,1401	0/0:15,0:15:45.15:0,45,1345	0/0:32,0:32:93.77:0,94,2814	1/1:17,0:17:29.49:518,29,0	0/1:17,0:16:4.09:206,0,4	0/0:20,0:20:60.18:0,60,1834	1/1:1,0:1:2.99:24,3,0
chr10	84046817	.	TCCACCACCACCACCACCACCA	T	36.34	PASS	AB=1.000;AC=3;AF=0.075;AN=40;BaseQRankSum=0.498;DP=224;FS=0.000;HRun=0;HaplotypeScore=107.7382;InbreedingCoeff=0.2218;MQ=73.15;MQ0=4;MQRankSum=-2.012;QD=1.65;ReadPosRankSum=-0.378;VQSLOD=2.0113;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,11:18:3.01:92,3,0	./.	0/0:16,0:12:3.01:0,3,43	./.	0/0:4,0:4:3.01:0,3,291	./.	0/0:8,0:8:11.96:0,12,219	0/0:20,0:19:0:0,0,0	0/0:7,0:6:8.96:0,9,602	0/0:7,0:7:8.96:0,9,353	./.	0/0:15,0:15:24.08:0,24,2155	0/0:7,0:7:9.03:0,9,646	0/0:10,0:10:18.06:0,18,1462	0/0:3,0:3:6.02:0,6,431	0/0:7,0:7:9.03:0,9,646	0/0:6,0:6:6.02:0,6,484	0/0:5,0:8:6.02:0,6,428	0/0:10,0:10:9.87:0,10,311	0/0:5,0:5:6.02:0,6,278	0/0:11,0:12:15.05:0,15,937	./.	./.	0/0:10,0:10:18.02:0,18,877	./.	0/1:4,0:4:31.40:31,0,159	0/0:1,0:4:12.04:0,12,626	./.
chr10	84046995	.	CTGTTTGTTGGTT	C	2000.96	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=8.396;DP=472;FS=0.520;HRun=0;HaplotypeScore=185.0954;InbreedingCoeff=0.4690;MQ=71.63;MQ0=2;MQRankSum=-7.772;QD=15.51;ReadPosRankSum=-0.598;VQSLOD=2.5632;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,5:17:44.97:888,45,0	0/0:5,0:5:12.04:0,12,317	0/0:36,0:31:65.29:0,65,1338	0/0:33,0:29:65.34:0,65,1376	0/0:11,0:11:33.05:0,33,1521	0/0:14,0:14:39.01:0,39,1257	0/0:14,0:14:16.47:0,16,135	0/1:27,0:27:63.70:64,0,351	0/0:12,0:12:33.09:0,33,1682	0/0:11,0:11:30.09:0,30,738	0/0:11,0:11:30.02:0,30,750	0/0:27,0:27:72.11:0,72,2722	0/0:15,0:15:45.12:0,45,2320	0/0:20,0:20:51.11:0,51,2206	0/0:21,0:21:57.14:0,57,2819	0/0:12,0:12:33.97:0,34,771	0/0:27,0:27:60.17:0,60,1469	0/0:20,0:20:55.39:0,55,2546	0/1:18,0:18:99:423,0,194	0/1:5,0:5:69.45:69,0,70	0/1:17,0:17:2.37:2,0,140	0/0:11,0:11:33.06:0,33,1443	0/0:12,0:12:33.09:0,33,1369	0/0:31,0:31:87.27:0,87,4393	1/1:3,0:5:8.96:181,9,0	1/1:21,0:21:23.74:196,24,0	0/1:15,0:14:99:329,0,116	1/1:4,0:4:4.41:14,4,0
chr10	84046996	.	TGTTTGTTG	T	2461.65	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=7.249;DP=472;FS=0.541;HRun=0;HaplotypeScore=145.2767;InbreedingCoeff=0.5042;MQ=71.41;MQ0=2;MQRankSum=-7.884;QD=25.12;ReadPosRankSum=0.298;VQSLOD=3.3971;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:44.52:503,45,0	0/0:5,0:5:12.03:0,12,151	0/0:36,0:31:65.28:0,65,1085	0/0:32,0:28:65.32:0,65,1037	0/0:11,0:11:33.05:0,33,1110	0/0:15,0:15:44.95:0,45,1095	0/1:16,0:16:46.91:325,0,47	0/0:28,0:28:81.52:0,82,755	0/0:12,0:12:33.09:0,33,1219	0/0:11,0:11:30.08:0,30,356	0/0:12,0:12:30:0,30,308	0/0:27,0:27:72.11:0,72,1991	0/0:15,0:15:45.12:0,45,1670	0/0:20,0:20:51.11:0,51,1586	0/0:21,0:21:57.14:0,57,2032	0/0:12,0:12:33.53:0,34,338	0/0:27,0:27:60.13:0,60,644	0/0:20,0:20:3.19:0,3,1744	0/1:17,0:17:99:133,0,286	0/1:5,0:5:21.46:21,0,70	0/0:16,0:16:29.68:0,30,222	0/0:11,0:11:33.06:0,33,1071	0/0:12,0:12:32.44:0,32,928	0/0:31,0:31:87.25:0,87,3090	1/1:5,0:5:8.96:125,9,0	1/1:1,20:21:57.11:1245,57,0	0/1:13,0:13:99:119,0,145	1/1:0,4:4:6.02:159,6,0
chr10	84047004	.	GGTTT	G	2878.25	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=11.241;DP=471;FS=9.760;HRun=0;HaplotypeScore=104.4351;InbreedingCoeff=0.7009;MQ=67.83;MQ0=3;MQRankSum=-5.915;QD=13.84;ReadPosRankSum=0.638;VQSLOD=2.1244;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:2.24:110,2,0	1/1:1,5:6:9.03:145,9,0	0/0:33,0:28:24.08:0,24,453	0/0:29,0:25:21.06:0,21,334	0/0:12,0:12:27.09:0,27,628	0/0:16,0:16:6.51:0,7,537	1/1:3,0:16:18.02:168,18,0	0/1:27,0:27:0.05:0,0,3	0/0:11,0:11:27.09:0,27,651	1/1:3,9:12:27.08:412,27,0	1/1:0,12:12:27.09:435,27,0	0/0:26,0:26:45.15:0,45,1003	0/0:17,0:17:42.10:0,42,930	0/0:16,0:16:36.12:0,36,774	0/0:19,0:19:51.14:0,51,1090	1/1:3,10:13:24:386,24,0	1/1:5,23:28:33.28:755,33,0	0/0:26,0:27:38.27:0,38,1284	1/1:18,0:17:14.24:138,14,0	1/1:5,0:5:3:25,3,0	0/0:12,0:12:0:0,0,0	0/1:12,0:12:19.94:20,0,530	0/0:14,0:14:27.09:0,27,594	0/0:31,0:31:29.94:0,30,1596	1/1:4,0:4:5.96:45,6,0	1/1:22,0:22:6.79:293,7,0	1/1:11,0:11:11.90:111,12,0	0/1:5,0:5:11.96:36,0,12
chr10	84047021	.	G	GT	507.05	PASS	AB=0.862;AC=5;AF=0.089;AN=56;BaseQRankSum=5.892;DP=505;FS=1.430;HRun=3;HaplotypeScore=94.5994;InbreedingCoeff=-0.0966;MQ=55.45;MQ0=5;MQRankSum=-4.231;QD=4.74;ReadPosRankSum=-1.482;VQSLOD=-0.1951;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:4.89:5,0,326	0/0:8,0:8:20.43:0,20,181	0/0:28,0:20:48.06:0,48,556	0/0:21,0:17:38.63:0,39,441	0/0:10,0:10:30.09:0,30,360	0/0:14,0:14:33.10:0,33,395	0/0:19,0:19:33.61:0,34,263	0/1:22,15:37:99:432,0,546	0/0:14,0:14:36.11:0,36,432	0/0:13,0:13:37.43:0,37,276	0/0:14,0:14:31.20:0,31,185	0/0:26,0:26:75.23:0,75,899	0/0:18,0:18:54.14:0,54,634	0/0:16,0:16:48.15:0,48,575	0/0:22,0:22:63.19:0,63,755	0/0:14,0:14:34.42:0,34,244	0/0:27,0:27:53.79:0,54,309	0/0:28,0:28:77.82:0,78,907	0/1:14,3:14:99:116,0,134	0/0:7,0:7:10.05:0,10,140	0/1:13,4:17:41.93:42,0,298	0/0:10,0:10:29.88:0,30,337	0/0:12,0:12:33.10:0,33,393	0/0:39,0:39:99:0,105,1242	0/0:5,0:6:16.93:0,17,149	0/0:24,0:24:63.03:0,63,604	0/1:15,1:16:24.64:25,0,283	0/0:7,0:7:12.01:0,12,123
chr10	84047026	.	TTTGTTTGTTTC	T	1183.62	PASS	AB=0.936;AC=8;AF=0.143;AN=56;BaseQRankSum=10.057;DP=519;FS=1.712;HRun=0;HaplotypeScore=191.4400;InbreedingCoeff=0.0145;MQ=56.76;MQ0=5;MQRankSum=-4.931;QD=9.62;ReadPosRankSum=-0.806;VQSLOD=2.6962;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:94.11:94,0,728	0/0:9,0:9:24.08:0,24,556	0/0:27,0:18:40.37:0,40,1701	0/0:17,0:13:36.12:0,36,1062	0/0:11,0:11:33.11:0,33,1744	0/0:13,0:13:39.13:0,39,1799	0/0:19,0:19:5.72:0,6,352	0/1:33,0:33:71.73:239,0,72	0/0:16,0:16:48.16:0,48,2077	0/0:14,0:14:42.14:0,42,1064	0/0:15,0:15:36.12:0,36,922	0/0:26,0:26:78.27:0,78,3267	0/0:20,0:20:60.21:0,60,2751	0/0:17,0:17:51.18:0,51,2239	0/0:21,0:21:63.22:0,63,2981	0/0:16,0:16:43.03:0,43,1047	0/0:31,0:31:72.25:0,72,1711	0/0:28,0:28:79.16:0,79,3679	0/1:16,5:18:57.94:444,0,58	1/1:4,1:5:1.69:86,2,0	0/1:17,0:17:35.20:35,0,38	0/0:11,0:11:33.11:0,33,1605	0/0:13,0:13:39.05:0,39,1682	0/0:43,0:43:99:0,127,5179	0/1:8,0:8:28.37:28,0,372	0/0:22,0:22:59.84:0,60,705	0/1:13,4:16:82.84:389,0,83	0/0:7,0:7:17.74:0,18,328
chr10	84047297	.	AGTGTGTGTGTGTGTGT	A	3426.85	PASS	AB=0.662;AC=7;AF=0.125;AN=56;BaseQRankSum=6.753;DP=651;FS=0.000;HRun=0;HaplotypeScore=265.3868;InbreedingCoeff=0.5020;MQ=69.05;MQ0=20;MQRankSum=-6.935;QD=36.46;ReadPosRankSum=1.545;VQSLOD=2.4897;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:33.11:0,33,1765	1/1:2,9:11:21.07:895,21,0	0/0:32,0:20:6.02:0,6,105	0/0:42,0:25:6.02:0,6,144	0/0:12,0:14:24.07:0,24,1322	0/0:21,0:20:27.09:0,27,1785	0/0:29,0:26:27.06:0,27,1320	0/0:36,0:35:59.25:0,59,2007	0/0:28,0:28:48.16:0,48,2753	0/1:14,9:23:2.43:692,0,2	0/1:5,10:14:4.22:508,0,4	0/0:21,0:20:39.13:0,39,2143	0/0:23,0:23:33.11:0,33,2018	0/0:24,0:24:32.68:0,33,1797	0/0:25,0:31:48.14:0,48,2366	1/1:11,10:23:1.66:820,2,0	0/1:11,10:20:63.31:512,0,63	0/0:13,0:17:27.56:0,28,1131	0/0:16,0:16:32.60:0,33,1384	0/0:15,0:15:24.07:0,24,1252	0/0:33,0:30:15.50:0,16,583	0/0:11,0:19:21.07:0,21,849	0/0:18,0:19:27.09:0,27,1578	0/0:18,0:21:42.13:0,42,2275	0/0:13,0:12:9.03:0,9,576	0/0:23,0:23:58.69:0,59,2563	0/0:22,0:22:30.98:0,31,1283	0/0:16,0:23:54.19:0,54,3422
chr10	84047805	.	T	TGGTA	6990.20	PASS	AB=0.561;AC=7;AF=0.125;AN=56;BaseQRankSum=-13.732;DP=677;FS=0.421;HRun=0;HaplotypeScore=112.9654;InbreedingCoeff=0.8383;MQ=66.75;MQ0=1;MQRankSum=-6.348;QD=56.83;ReadPosRankSum=1.192;VQSLOD=6.4068;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,24:32:19.20:1485,0,19	0/0:14,0:14:42.14:0,42,772	0/0:21,0:18:38.86:0,39,609	0/0:21,0:19:46.70:0,47,775	0/0:24,0:24:60.20:0,60,1084	0/0:29,0:29:84.23:0,84,1465	0/0:23,0:23:60.21:0,60,1104	0/0:26,0:26:72.25:0,72,1311	0/0:31,0:31:90.29:0,90,1623	0/0:21,0:21:57.20:0,57,1033	0/0:15,0:15:42.11:0,42,739	0/0:31,0:31:90.27:0,90,1594	0/0:21,0:21:60.18:0,60,1052	0/0:24,0:24:66.20:0,66,1168	0/0:34,0:34:99:0,99,1792	0/0:26,0:26:78.27:0,78,1431	0/0:31,0:31:90.31:0,90,1635	0/0:25,0:25:66.18:0,66,1159	0/0:13,0:13:36.12:0,36,660	0/0:10,0:10:24.08:0,24,442	0/0:26,0:26:65.87:0,66,1150	0/0:25,0:25:51.17:0,51,937	0/0:18,0:18:51.15:0,51,877	0/0:23,0:23:66.23:0,66,1199	1/1:5,26:32:69.24:1819,69,0	1/1:6,28:35:84.29:2182,84,0	0/0:22,0:22:54.17:0,54,962	1/1:1,20:24:57.20:1504,57,0
chr10	84048048	.	TCCTTCTGTGCCCATGGTCCCCGTACC	T	7034.38	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.584;DP=653;FS=1.278;HRun=0;HaplotypeScore=415.2349;InbreedingCoeff=0.9808;MQ=87.25;MQ0=0;MQRankSum=-7.608;QD=87.93;ReadPosRankSum=2.824;VQSLOD=2.9462;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:26:30.10:1964,30,0	0/0:11,0:11:30.07:0,30,2339	0/0:25,0:25:50.27:0,50,2780	0/0:32,0:33:60.56:0,61,4228	0/0:32,0:32:75.20:0,75,6672	0/0:24,0:24:60.19:0,60,5852	0/0:35,0:35:90.19:0,90,7394	0/0:21,0:21:59.93:0,60,2657	0/0:22,0:22:63.20:0,63,6480	0/0:26,0:26:69.16:0,69,6261	0/0:21,0:21:57.20:0,57,6118	0/0:32,0:32:75.22:0,75,6680	0/0:30,0:30:90.27:0,90,7819	0/0:38,0:38:99:0,99,8770	0/0:32,0:32:87.26:0,87,8407	0/0:29,0:29:78.24:0,78,7879	0/0:22,0:22:57.18:0,57,5890	0/0:23,0:23:63.22:0,63,6483	0/0:13,0:13:33.11:0,33,3234	0/0:8,0:8:20.86:0,21,2353	0/0:15,0:15:39.13:0,39,4448	0/0:26,0:26:69.22:0,69,6811	0/0:21,0:21:51.12:0,51,4308	0/0:26,0:26:72.25:0,72,7144	1/1:2,19:21:33.07:2040,33,0	1/1:3,15:18:42.05:2409,42,0	0/0:8,0:8:21.07:0,21,2313	1/1:0,15:15:9.03:621,9,0
chr10	84048266	.	G	GT	3654.67	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.179;DP=652;FS=5.511;HRun=6;HaplotypeScore=64.7935;InbreedingCoeff=0.9998;MQ=83.40;MQ0=0;MQRankSum=0.317;QD=31.51;ReadPosRankSum=-1.159;VQSLOD=3.7857;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:84.15:0,84,841	0/0:12,0:12:33.07:0,33,336	0/0:33,0:31:34.39:0,34,569	0/0:16,0:16:44.55:0,45,388	0/0:31,0:31:93.16:0,93,932	0/0:21,0:21:57.13:0,57,581	0/0:18,0:18:42.08:0,42,421	1/1:4,20:24:56.84:600,57,0	0/0:16,0:16:45.08:0,45,451	0/0:27,0:27:72.14:0,72,724	0/0:17,0:17:51.12:0,51,520	0/0:27,0:27:63.14:0,63,642	0/0:18,0:18:54.11:0,54,544	0/0:22,0:22:63.14:0,63,642	0/0:29,0:29:75.13:0,75,751	0/0:30,0:30:81.17:0,81,819	0/0:21,0:21:57.09:0,57,572	0/0:25,0:25:72.16:0,72,734	1/1:3,24:27:75.16:909,75,0	1/1:0,14:14:37.67:457,38,0	1/1:2,15:17:42.13:528,42,0	0/0:17,0:17:48.10:0,48,487	0/0:24,0:24:63.11:0,63,628	0/0:28,0:28:65.45:0,65,712	0/0:27,0:27:75.17:0,75,765	0/0:25,0:25:66.14:0,66,673	1/1:1,33:33:93.09:1160,93,0	0/0:19,0:19:48.11:0,48,490
chr10	84050518	.	AACAGG	A	2384.73	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.938;DP=765;FS=5.778;HRun=0;HaplotypeScore=149.1887;InbreedingCoeff=0.9997;MQ=77.99;MQ0=1;MQRankSum=-10.724;QD=44.16;ReadPosRankSum=2.138;VQSLOD=3.8141;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,3115	0/0:18,0:18:51.14:0,51,1521	0/0:31,0:31:90.27:0,90,2614	0/0:14,0:14:39.12:0,39,1016	0/0:29,0:29:81.28:0,81,2473	0/0:20,0:20:54.19:0,54,1690	0/0:29,0:29:84.22:0,84,2391	0/0:22,0:22:60.16:0,60,1659	0/0:21,0:21:63.20:0,63,1833	0/0:25,0:25:72.25:0,72,2239	0/0:13,0:13:36.11:0,36,987	0/0:41,0:41:99:0,123,3395	0/0:22,0:22:63.22:0,63,1974	0/0:37,0:37:99:0,108,3164	1/1:1,32:33:87.30:1799,87,0	0/0:23,0:23:66.21:0,66,1998	0/0:39,0:39:99:0,114,3496	1/1:4,17:21:36.06:708,36,0	0/0:31,0:31:90.26:0,90,2440	0/0:18,0:18:51.15:0,51,1451	0/0:74,0:73:99:0,208,5956	0/0:21,0:21:63.22:0,63,1907	0/0:14,0:14:39.10:0,39,1079	0/0:44,0:44:99:0,132,3949	0/0:20,0:20:60.21:0,60,1880	0/0:36,0:36:99:0,102,3076	0/0:24,0:24:69.20:0,69,2048	0/0:11,0:11:33.11:0,33,977
chr10	84050576	.	GC	G	7128.59	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.553;DP=696;FS=20.694;HRun=4;HaplotypeScore=80.3300;InbreedingCoeff=0.9691;MQ=69.05;MQ0=1;MQRankSum=-0.995;QD=32.85;ReadPosRankSum=-1.736;VQSLOD=2.6678;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1453	0/0:7,0:7:21.07:0,21,293	0/0:8,0:8:21.07:0,21,290	0/0:10,0:10:4.09:0,4,194	0/0:19,0:19:57.19:0,57,797	0/0:18,0:18:51.17:0,51,714	0/0:36,0:36:99:0,105,1471	1/1:0,25:25:75.23:899,75,0	0/0:21,0:21:63.20:0,63,867	0/0:19,0:19:57.19:0,57,796	0/0:12,0:12:33.11:0,33,462	0/0:43,0:43:99:0,120,1633	0/0:29,0:29:81.27:0,81,1133	0/0:47,0:47:99:0,138,1921	0/0:30,0:30:69.10:0,69,897	0/0:26,0:26:75.25:0,75,1050	0/0:34,0:34:99:0,102,1371	0/0:21,0:21:48.16:0,48,668	1/1:0,23:23:69.21:828,69,0	1/1:1,23:24:63.19:756,63,0	1/1:3,67:69:99:2232,187,0	0/0:17,0:17:51.17:0,51,709	0/0:17,0:17:48.15:0,48,655	0/0:29,0:29:84.27:0,84,1160	1/1:1,19:20:57.17:684,57,0	1/1:2,18:20:12.11:546,12,0	1/1:2,24:26:72.22:861,72,0	1/1:0,9:9:27.08:324,27,0
chr10	84051244	.	CA	C	1463.99	PASS	AB=0.874;AC=18;AF=0.321;AN=56;BaseQRankSum=8.509;DP=518;FS=193.872;HRun=1;HaplotypeScore=72.1473;InbreedingCoeff=-0.0171;MQ=76.84;MQ0=0;MQRankSum=-1.171;QD=4.95;ReadPosRankSum=8.300;VQSLOD=-0.0397;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,12:31:99:167,0,108	0/0:7,0:7:14.85:0,15,123	0/0:10,0:9:24.16:0,24,199	0/0:13,1:13:16.06:0,16,185	0/1:19,1:20:26.88:27,0,142	1/1:12,4:16:0.23:93,0,0	0/1:32,5:37:91.24:179,0,91	0/1:4,0:4:16.86:17,0,46	0/1:21,3:24:29.50:127,0,29	0/0:19,0:19:55.94:0,56,445	0/0:12,0:12:31.29:0,31,217	0/0:31,0:31:85.19:0,85,1186	1/1:26,3:30:25.41:224,25,0	0/1:26,7:33:37.34:234,0,37	0/0:27,0:27:81.06:0,81,949	0/0:18,0:18:32.83:0,33,249	0/0:29,0:29:52.39:0,52,460	0/0:29,0:29:84.18:0,84,1083	0/0:8,0:8:21.03:0,21,213	0/0:9,0:9:4.89:0,5,112	0/1:7,0:7:9.31:9,0,89	0/1:9,2:11:48.58:49,0,77	0/1:11,1:12:9.21:48,0,9	1/1:25,1:26:10.33:140,10,0	0/1:11,3:14:48.81:101,0,49	0/1:17,5:22:19.41:155,0,19	0/0:9,0:9:23.86:0,24,201	0/1:7,2:9:5.17:64,0,5
chr10	84051245	.	AC	A	5939.90	PASS	AB=0.806;AC=28;AF=0.500;AN=56;BaseQRankSum=-0.035;DP=548;FS=22.670;HRun=9;HaplotypeScore=71.3083;InbreedingCoeff=0.7829;MQ=75.55;MQ0=0;MQRankSum=2.308;QD=18.50;ReadPosRankSum=3.354;VQSLOD=3.7328;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,12:33:54.01:493,54,0	0/0:5,0:8:8.81:0,9,58	0/1:8,2:9:24.08:44,0,24	0/1:10,4:13:18.54:45,0,19	1/1:8,13:21:33:301,33,0	1/1:5,11:16:42.02:384,42,0	1/1:14,26:40:81.02:739,81,0	0/0:6,0:6:0.30:0,0,1	1/1:6,18:24:57.02:518,57,0	0/0:7,0:21:49.90:0,50,282	0/0:4,0:12:23.02:0,23,132	0/0:33,0:33:87.12:0,87,984	1/1:6,22:29:78:706,78,0	1/1:11,22:33:43.43:649,43,0	0/0:25,0:27:75.02:0,75,832	0/0:5,0:18:17.04:0,17,87	0/0:9,0:30:55.13:0,55,397	0/0:28,0:29:78.06:0,78,879	0/0:9,0:9:8.90:0,9,59	0/0:11,0:11:5.98:0,6,49	0/0:12,0:12:9.78:0,10,66	1/1:6,5:11:21:192,21,0	1/1:4,10:14:30.01:273,30,0	1/1:2,24:26:69.03:631,69,0	1/1:8,7:15:9.22:225,9,0	1/1:8,16:24:56.75:520,57,0	0/0:11,0:11:14.37:0,14,85	1/1:5,6:11:24:219,24,0
chr10	84051843	.	ATATGTATGTATGTATGTATGTATGTATG	A	5613.97	PASS	AB=0.716;AC=25;AF=0.463;AN=54;BaseQRankSum=10.824;DP=798;FS=3.744;HRun=0;HaplotypeScore=448.7043;InbreedingCoeff=0.6865;MQ=60.04;MQ0=12;MQRankSum=-3.874;QD=14.43;ReadPosRankSum=-1.429;VQSLOD=1.1397;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:41:21.54:0,22,650	1/1:2,17:19:12.04:756,12,0	0/0:29,0:19:14.99:0,15,184	0/0:30,0:14:6.46:0,6,104	0/0:35,0:35:78.27:0,78,6655	0/0:19,0:19:45.14:0,45,3788	0/0:22,0:30:35.23:0,35,1392	1/1:20,15:34:44.90:452,45,0	0/0:26,0:26:66.23:0,66,5975	1/1:5,20:25:14.62:188,15,0	./.	0/0:27,0:27:54.19:0,54,4062	0/0:44,0:44:96.31:0,96,7115	0/0:42,0:42:96.33:0,96,8105	1/1:12,0:47:6.02:367,6,0	1/1:6,36:42:6.02:434,6,0	0/1:5,15:20:54.30:211,0,54	0/1:14,0:14:4.17:71,0,4	1/1:16,13:28:35.89:469,36,0	1/1:7,20:27:3.01:217,3,0	1/1:27,0:27:15.04:287,15,0	0/0:26,0:26:48.16:0,48,3812	0/0:11,0:28:40.04:0,40,2471	0/0:11,0:14:33.11:0,33,1975	1/1:22,0:22:21.02:644,21,0	0/1:9,0:34:65.35:367,0,65	1/1:12,21:33:2.73:210,3,0	1/1:5,0:15:15.05:941,15,0
chr10	84052316	.	CA	C	768.14	PASS	AB=0.953;AC=6;AF=0.107;AN=56;BaseQRankSum=13.871;DP=687;FS=12.355;HRun=2;HaplotypeScore=84.6135;InbreedingCoeff=0.3662;MQ=83.46;MQ0=0;MQRankSum=-3.246;QD=5.02;ReadPosRankSum=0.746;VQSLOD=-0.6538;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.20:0,87,1182	0/0:12,0:12:36.10:0,36,503	0/0:20,1:20:52.51:0,53,635	0/0:22,0:22:59.30:0,59,840	0/0:18,0:18:48.13:0,48,645	0/0:21,0:21:63.16:0,63,836	0/0:33,0:33:96.24:0,96,1287	0/1:34,1:35:71.36:71,0,152	0/0:24,0:24:72:0,72,923	0/0:18,0:18:51.12:0,51,676	0/0:14,0:14:36.09:0,36,476	0/0:29,0:29:84.15:0,84,1103	0/0:23,0:23:48.33:0,48,860	0/0:28,0:28:56.46:0,56,1031	0/0:34,0:34:99:0,102,1353	0/0:29,0:29:84.26:0,84,1190	0/0:37,0:37:99:0,108,1492	0/0:20,0:20:60.18:0,60,842	0/1:29,1:30:46.20:145,0,46	0/1:23,3:26:0.92:177,0,1	0/1:36,1:37:69.93:104,0,70	0/0:20,0:20:57.10:0,57,765	0/0:8,0:8:21.03:0,21,234	0/0:33,0:33:96.27:0,96,1331	0/0:22,0:22:66.21:0,66,921	0/0:34,0:34:79.93:0,80,651	1/1:20,5:25:67.57:401,68,0	0/0:3,0:3:8.88:0,9,60
chr10	84052317	.	AC	A	3886.53	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.748;DP=690;FS=4.951;HRun=7;HaplotypeScore=73.9426;InbreedingCoeff=0.9723;MQ=82.85;MQ0=0;MQRankSum=-2.393;QD=25.40;ReadPosRankSum=-1.052;VQSLOD=3.8925;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.25:0,90,1094	0/0:12,0:12:33.11:0,33,415	0/0:21,0:20:27.07:0,27,357	0/0:21,0:21:51.12:0,51,604	0/0:17,0:17:51.11:0,51,590	0/0:22,0:22:60.19:0,60,751	0/0:32,0:32:87.24:0,87,1056	1/1:10,26:36:81.17:825,81,0	0/0:23,0:23:60.19:0,60,753	0/0:19,0:19:45.14:0,45,555	0/0:14,0:14:30.10:0,30,377	0/0:29,0:29:81.24:0,81,995	0/0:22,0:22:55.99:0,56,683	0/0:28,0:28:73.11:0,73,896	0/0:35,0:35:96.29:0,96,1195	0/0:29,0:29:84.26:0,84,1046	0/0:38,0:38:99:0,102,1268	0/0:20,0:20:57.18:0,57,717	1/1:4,25:29:78.15:781,78,0	1/1:7,19:26:63.14:641,63,0	1/1:6,30:36:84.19:857,84,0	0/0:19,0:19:51.15:0,51,629	0/0:8,0:8:18.05:0,18,214	0/0:34,0:34:93.25:0,93,1140	0/0:22,0:22:63.19:0,63,781	0/0:9,0:37:80.26:0,80,452	1/1:6,20:26:78.14:783,78,0	0/0:1,0:3:5.68:0,6,29
chr10	84053530	.	TA	T	142.89	PASS	AB=0.938;AC=3;AF=0.054;AN=56;BaseQRankSum=2.560;DP=631;FS=3.377;HRun=10;HaplotypeScore=93.4142;InbreedingCoeff=0.6141;MQ=77.86;MQ0=5;MQRankSum=-1.428;QD=4.08;ReadPosRankSum=-0.067;VQSLOD=1.1327;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.19:0,90,966	0/0:16,0:16:48.10:0,48,513	0/0:33,0:17:14.52:0,15,134	0/0:27,0:21:7.05:0,7,132	0/0:37,0:37:81.19:0,81,874	0/0:24,0:24:63.13:0,63,677	1/1:4,16:20:26.99:234,27,0	0/0:34,0:34:92.97:0,93,951	0/0:19,0:19:48.13:0,48,531	0/0:16,1:17:22.03:0,22,455	0/0:22,0:22:45.12:0,45,498	0/0:24,0:24:63.09:0,63,651	0/0:19,0:19:42.10:0,42,457	0/0:22,0:22:51.11:0,51,546	0/0:27,0:27:72.13:0,72,760	0/0:17,0:17:48.13:0,48,531	0/0:26,0:26:63.16:0,63,687	0/0:16,0:16:42.06:0,42,450	0/0:21,1:22:31.27:0,31,555	0/0:13,0:13:30.05:0,30,315	0/1:14,1:15:10.50:10,0,295	0/0:20,0:20:51.13:0,51,555	0/0:25,0:25:48.13:0,48,563	0/0:18,0:18:48.12:0,48,523	0/0:19,0:19:52.96:0,53,569	0/0:27,0:27:69.18:0,69,755	0/0:29,2:31:29.13:0,29,741	0/0:6,0:6:18.05:0,18,199
chr10	84053546	.	AT	A	3901.81	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.263;DP=645;FS=5.423;HRun=9;HaplotypeScore=82.5141;InbreedingCoeff=0.9950;MQ=74.82;MQ0=7;MQRankSum=-1.027;QD=22.68;ReadPosRankSum=-1.013;VQSLOD=4.0297;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.23:0,84,948	0/0:18,0:18:51.14:0,51,580	0/0:45,0:21:41.68:0,42,421	0/0:32,0:23:16.85:0,17,222	0/0:31,0:31:87.24:0,87,988	0/0:20,0:20:57.17:0,57,658	0/0:17,0:17:32.82:0,33,371	1/1:4,36:39:99:960,105,0	0/0:21,0:21:51.14:0,51,579	0/0:23,0:23:62.93:0,63,727	0/0:22,0:22:60.17:0,60,683	0/0:26,0:26:72.19:0,72,811	0/0:19,0:19:54.14:0,54,612	0/0:21,0:21:51.14:0,51,579	1/1:2,25:27:72.04:659,72,0	0/0:19,0:19:48.13:0,48,545	0/0:21,1:22:32.72:0,33,629	1/1:3,18:21:48.02:439,48,0	1/1:3,16:19:48.02:439,48,0	1/1:0,17:18:53.07:472,53,0	1/1:2,13:15:27.01:247,27,0	0/0:18,1:19:20.66:0,21,483	0/0:25,0:25:74.96:0,75,842	0/0:15,1:16:17.65:0,18,448	0/0:15,0:15:39.11:0,39,449	0/0:23,0:23:66.19:0,66,758	1/1:5,27:32:75.03:685,75,0	0/0:8,0:8:24.07:0,24,277
chr10	84059248	.	GA	G	704.61	PASS	AB=0.747;AC=12;AF=0.214;AN=56;BaseQRankSum=2.332;DP=662;FS=10.701;HRun=15;HaplotypeScore=87.7488;InbreedingCoeff=0.5684;MQ=74.76;MQ0=5;MQRankSum=-1.099;QD=5.11;ReadPosRankSum=5.077;VQSLOD=1.5757;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:53.14:0,53,568	1/1:0,8:9:19.45:121,19,0	0/0:43,0:23:8.25:0,8,104	0/0:23,0:12:10.86:0,11,60	0/0:29,0:29:60.18:0,60,442	0/0:21,1:23:42.41:0,42,362	0/0:7,0:15:13.89:0,14,85	0/0:41,0:41:69.47:0,69,582	0/0:19,1:20:27.18:0,27,331	1/1:8,10:19:30.54:184,31,0	0/1:4,8:14:0.61:83,0,1	0/0:35,1:36:2.87:0,3,351	0/0:26,0:27:49.07:0,49,434	0/1:21,3:25:16.77:17,0,249	0/0:29,0:29:70.61:0,71,337	1/1:6,12:19:22.53:140,23,0	1/1:5,10:16:29.56:210,30,0	0/0:20,0:20:50.75:0,51,246	0/0:22,3:25:19.82:0,20,314	0/0:18,2:21:19.81:0,20,286	0/1:10,1:14:11.31:11,0,50	0/0:19,0:19:32.95:0,33,276	0/0:15,1:16:3.93:0,4,139	0/0:22,2:24:23.15:0,23,310	0/1:8,14:22:21.83:110,0,22	0/0:21,0:24:32.64:0,33,353	0/0:32,2:34:37.10:0,37,532	0/0:16,1:20:19.07:0,19,240
chr10	84060294	.	AG	A	6620.48	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.639;DP=828;FS=0.000;HRun=1;HaplotypeScore=81.8333;InbreedingCoeff=0.9995;MQ=85.23;MQ0=0;MQRankSum=-7.006;QD=39.17;ReadPosRankSum=-1.401;VQSLOD=4.7200;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,178,2801	0/0:8,0:8:24.08:0,24,384	0/0:26,0:26:69.21:0,69,1042	0/0:32,0:32:89.93:0,90,1333	0/0:17,0:17:51.17:0,51,815	0/0:18,0:18:54.18:0,54,863	0/0:32,0:32:96.31:0,96,1512	1/1:1,23:24:69.23:965,69,0	0/0:37,0:37:99:0,111,1762	0/0:25,0:25:72.25:0,72,1151	0/0:17,0:17:51.17:0,51,815	0/0:35,0:35:99:0,105,1651	0/0:29,0:29:87.30:0,87,1386	0/0:35,0:35:99:0,105,1606	0/0:42,0:42:99:0,126,1990	0/0:34,0:33:99:0,102,1629	0/0:45,0:45:99:0,135,2157	0/0:30,0:29:90.29:0,90,1403	1/1:0,28:28:84.24:1152,84,0	1/1:0,24:24:69.23:947,69,0	1/1:0,69:70:99:2595,187,0	0/0:27,0:27:81.28:0,81,1291	0/0:20,0:20:60.20:0,60,947	0/0:20,0:20:60.20:0,60,959	0/0:21,0:21:63.20:0,63,984	0/0:36,0:36:99:0,108,1681	1/1:0,23:23:69.23:962,69,0	0/0:12,0:12:33.11:0,33,527
chr10	84063569	.	ACAGCCCCCATCTT	A	9274.32	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.483;DP=803;FS=2.559;HRun=0;HaplotypeScore=293.6255;InbreedingCoeff=0.9998;MQ=87.10;MQ0=0;MQRankSum=-13.075;QD=79.95;ReadPosRankSum=1.153;VQSLOD=4.4314;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,175,10506	0/0:15,0:15:45.15:0,45,2948	0/0:29,0:29:81.28:0,81,4538	0/0:29,0:29:87.27:0,87,4884	0/0:29,0:29:87.28:0,87,5170	0/0:27,0:27:75.26:0,75,4859	0/0:30,0:30:90.30:0,90,5464	1/1:13,17:30:51.16:1891,51,0	0/0:28,0:28:81.28:0,81,4814	0/0:28,0:28:84.28:0,84,5370	0/0:26,0:26:72.25:0,72,4297	0/0:42,0:42:99:0,126,7663	0/0:29,0:29:87.30:0,87,5449	0/0:16,0:16:45.15:0,45,2780	0/0:34,0:34:99:0,99,6513	0/0:43,0:43:99:0,123,7833	0/0:28,0:28:84.29:0,84,5489	0/0:32,0:32:93.32:0,93,5843	1/1:5,10:15:30.03:971,30,0	1/1:5,15:20:45.15:1814,45,0	1/1:3,17:20:30.57:1210,31,0	0/0:24,0:24:72.25:0,72,4639	0/0:27,0:27:81.26:0,81,4893	0/0:28,0:28:81.28:0,81,5028	0/0:26,0:26:78.27:0,78,4964	0/0:36,0:36:99:0,105,6843	1/1:0,31:31:84.29:3388,84,0	0/0:19,0:19:57.20:0,57,3715
chr10	84064156	.	A	ATT	1921.14	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=0.943;DP=589;FS=2.843;HRun=13;HaplotypeScore=82.7365;InbreedingCoeff=0.8691;MQ=72.66;MQ0=1;MQRankSum=1.255;QD=15.25;ReadPosRankSum=-4.676;VQSLOD=1.7924;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:39:98.44:0,98,834	0/0:5,0:5:8.93:0,9,79	0/1:24,0:18:9.06:9,0,124	0/0:18,0:15:17.43:0,17,103	0/0:25,0:25:53.75:0,54,467	0/0:8,0:9:8.78:0,9,123	0/0:19,0:22:53.24:0,53,480	1/1:12,14:28:45.82:476,46,0	0/0:22,0:22:41.67:0,42,414	0/0:18,0:18:26.73:0,27,226	0/0:12,0:13:35.73:0,36,302	0/0:35,0:37:83.76:0,84,784	0/0:18,0:18:38.89:0,39,339	0/0:24,0:24:44.80:0,45,391	0/0:34,0:36:26.68:0,27,604	0/0:26,0:26:65.85:0,66,567	0/0:21,0:22:47.56:0,48,397	0/0:18,0:18:45.79:0,46,393	1/1:9,14:25:50.57:591,51,0	1/1:3,12:16:36.03:441,36,0	1/1:4,7:12:20.56:253,21,0	0/0:16,0:19:29.29:0,29,279	0/0:11,0:11:23.92:0,24,211	0/0:22,0:22:56.94:0,57,501	0/0:18,0:20:41.45:0,41,398	0/0:26,0:27:55.70:0,56,482	1/1:4,14:20:24.97:327,25,0	0/0:12,0:12:20.87:0,21,185
chr10	84064299	.	AGT	A	406.32	PASS	AB=0.900;AC=22;AF=0.423;AN=52;BaseQRankSum=3.843;DP=544;FS=2.705;HRun=0;HaplotypeScore=104.2945;InbreedingCoeff=-0.1102;MQ=55.10;MQ0=13;MQRankSum=-0.252;QD=1.20;ReadPosRankSum=1.875;VQSLOD=2.0612;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:17:3:27,3,0	0/0:10,0:11:15:0,15,171	./.	./.	0/1:10,0:12:12:12,0,117	0/1:12,2:14:17.31:17,0,140	1/1:17,0:18:6.47:28,6,0	0/0:25,0:24:0:0,0,0	0/1:10,2:12:49.63:50,0,97	0/0:15,0:14:14.91:0,15,111	0/0:19,0:19:21.24:0,21,164	0/1:20,3:23:51.44:51,0,233	0/0:12,0:12:15.51:0,16,203	0/1:17,0:17:34.45:34,0,201	1/1:5,0:17:19.72:98,20,0	0/0:15,0:19:8.95:0,9,89	0/0:17,0:32:9:0,9,78	1/1:13,0:14:2.84:14,3,0	0/1:16,1:16:23.31:23,0,54	0/0:11,0:12:3.86:0,4,182	0/1:64,1:63:12.12:12,0,448	0/1:15,2:16:22.87:23,0,159	0/1:12,3:15:23.47:23,0,49	0/1:28,1:31:77.48:77,0,210	1/1:7,0:12:5.68:28,6,0	0/1:16,3:18:22.04:22,0,81	0/1:14,2:17:23.29:23,0,62	0/0:5,0:5:3.01:0,3,44
chr10	84064801	.	GA	G	2145.57	PASS	AB=0.785;AC=11;AF=0.196;AN=56;BaseQRankSum=9.444;DP=685;FS=1.707;HRun=11;HaplotypeScore=77.4595;InbreedingCoeff=0.6808;MQ=79.57;MQ0=0;MQRankSum=-0.174;QD=11.47;ReadPosRankSum=-0.235;VQSLOD=3.3266;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:46:99:0,104,1012	0/0:8,0:8:23.64:0,24,227	0/0:32,0:29:37:0,37,350	0/1:19,2:20:22.50:22,0,181	0/0:27,0:28:68.98:0,69,703	0/0:20,2:23:7.68:0,8,469	0/0:15,0:17:47.81:0,48,470	1/1:7,25:32:74.84:608,75,0	0/0:20,0:20:51.09:0,51,525	0/1:24,3:27:4.76:5,0,560	0/0:26,1:28:42.13:0,42,575	0/0:20,0:20:57.08:0,57,583	0/0:21,1:22:23.46:0,23,446	0/0:16,0:16:37.32:0,37,379	0/0:28,2:33:43.48:0,43,801	0/0:18,0:17:45.08:0,45,462	0/0:24,0:28:61.97:0,62,639	0/0:21,0:21:57.14:0,57,607	0/1:3,17:20:9.84:337,0,10	1/1:2,25:27:56.70:453,57,0	1/1:4,23:27:18.95:362,19,0	0/0:16,0:16:48.08:0,48,494	0/0:21,0:21:51.10:0,51,524	0/0:27,2:30:35.26:0,35,742	0/0:29,0:29:75.16:0,75,786	0/0:23,0:23:57.12:0,57,591	1/1:7,24:33:66.72:528,67,0	0/0:19,0:19:48.12:0,48,511
chr10	84065509	.	TCTTCCTTCCTTC	T	2208.33	PASS	AB=1.000;AC=22;AF=0.423;AN=52;BaseQRankSum=4.566;DP=453;FS=8.110;HRun=0;HaplotypeScore=174.8999;InbreedingCoeff=0.4587;MQ=44.31;MQ0=31;MQRankSum=-3.887;QD=9.64;ReadPosRankSum=1.115;VQSLOD=2.0229;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:26:63.03:0,63,1435	1/1:5,0:5:9:134,9,0	./.	./.	0/0:29,0:29:69.22:0,69,1596	0/0:22,0:22:32.59:0,33,581	0/0:20,0:16:38.81:0,39,316	1/1:38,0:28:8.86:60,9,0	0/0:13,0:12:17.86:0,18,390	1/1:15,0:14:32.06:403,32,0	1/1:3,11:14:11.84:115,12,0	0/0:20,0:20:20.40:0,20,1032	0/0:15,0:13:23.85:0,24,607	0/0:10,0:10:24.08:0,24,634	0/1:19,0:19:22.07:22,0,119	0/1:17,0:13:24.72:394,0,25	1/1:29,0:26:5.05:480,5,0	0/1:18,0:15:99:132,0,153	1/1:10,0:5:3.36:79,3,0	1/1:14,0:13:16.01:224,16,0	0/1:9,0:6:19.69:48,0,20	0/0:14,0:14:33.11:0,33,972	0/0:13,0:13:21.06:0,21,534	0/0:23,0:21:6.35:0,6,772	0/0:13,0:13:16.41:0,16,297	0/1:10,0:9:23.87:24,0,412	1/1:18,0:17:16.50:277,17,0	0/1:13,0:8:2.91:3,0,220
chr10	84065537	.	CCTTTCTTT	C	193.60	PASS	AB=1.000;AC=8;AF=0.148;AN=54;BaseQRankSum=4.700;DP=410;FS=0.000;HRun=0;HaplotypeScore=109.3842;InbreedingCoeff=0.3640;MQ=42.40;MQ0=22;MQRankSum=-2.009;QD=3.87;ReadPosRankSum=0.738;VQSLOD=1.5822;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:25:66.17:0,66,1582	1/1:5,0:5:2.98:23,3,0	0/0:17,0:3:9.03:0,9,148	0/0:20,0:4:6.02:0,6,102	0/0:32,0:32:57.19:0,57,1567	0/0:11,0:10:18.06:0,18,535	0/0:20,0:17:45.15:0,45,760	0/0:12,0:9:21.01:0,21,236	0/0:15,0:14:33.11:0,33,805	0/0:14,0:13:13.71:0,14,181	./.	0/0:16,0:16:28.59:0,29,853	0/0:13,0:11:24.07:0,24,571	0/0:8,0:8:18.06:0,18,542	1/1:9,4:11:5.68:29,6,0	0/0:18,0:14:15.52:0,16,261	0/0:25,0:22:3.17:0,3,139	0/1:13,0:10:28.10:190,0,28	0/0:12,0:8:15.89:0,16,186	0/0:10,0:9:11.96:0,12,112	0/0:7,0:5:4.36:0,4,29	0/0:13,0:13:33.11:0,33,999	0/0:11,0:11:15.01:0,15,303	0/0:23,0:20:22.02:0,22,543	0/0:10,0:9:6.69:0,7,16	0/1:10,0:9:40.04:40,0,93	0/0:9,0:8:4.91:0,5,84	1/1:8,0:6:0.33:35,0,0
chr10	84065808	.	A	ATC	1839.89	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.234;DP=664;FS=9.621;HRun=0;HaplotypeScore=93.2821;InbreedingCoeff=0.9250;MQ=70.93;MQ0=0;MQRankSum=0.228;QD=33.45;ReadPosRankSum=0.182;VQSLOD=5.5841;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:41:96.13:0,96,1186	0/0:9,0:9:21.07:0,21,265	0/0:21,0:20:9.64:0,10,310	0/0:23,0:22:50.36:0,50,588	0/0:15,0:15:39.12:0,39,492	0/0:26,0:27:60.02:0,60,732	0/0:35,0:36:90.12:0,90,1111	0/0:29,0:29:78.19:0,78,923	0/0:14,0:14:33.07:0,33,388	0/0:29,0:27:63.20:0,63,794	0/0:13,0:13:27.09:0,27,340	0/0:34,0:34:90.29:0,90,1134	0/0:34,0:35:87.09:0,87,1058	0/0:21,0:21:54.17:0,54,681	0/0:27,0:27:72.23:0,72,908	0/0:34,0:34:96.31:0,96,1210	0/0:29,0:29:72.23:0,72,908	0/0:15,0:15:39.12:0,39,489	0/0:27,0:27:51.13:0,51,597	0/0:12,0:12:27.09:0,27,341	0/0:25,0:25:66.18:0,66,806	0/0:19,0:19:45.13:0,45,553	0/0:15,0:15:33.11:0,33,416	0/0:34,0:34:87.28:0,87,1096	1/1:1,18:18:45.15:748,45,0	1/1:5,18:22:4.10:727,4,0	0/0:25,0:25:63.20:0,63,793	1/1:1,11:12:30.10:498,30,0
chr10	84066985	.	GT	G	10112.19	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=11.863;DP=764;FS=2.818;HRun=7;HaplotypeScore=105.3674;InbreedingCoeff=0.9834;MQ=65.36;MQ0=0;MQRankSum=-2.359;QD=23.35;ReadPosRankSum=1.642;VQSLOD=4.6285;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:26:60.14:612,60,0	1/1:1,7:8:21.05:214,21,0	0/0:20,0:18:45.02:0,45,510	0/0:26,0:23:52.86:0,53,605	0/0:34,0:39:84.74:0,85,1101	0/0:32,0:32:85.69:0,86,1022	1/1:5,13:18:5.94:279,6,0	1/1:12,30:46:55.94:851,56,0	0/0:15,0:19:36.69:0,37,517	1/1:4,30:34:87.19:887,87,0	1/1:1,26:29:73.72:738,74,0	0/0:21,0:21:57.17:0,57,704	0/0:26,0:32:61.12:0,61,851	0/0:32,0:35:80.76:0,81,1082	1/1:1,27:29:74.76:764,75,0	1/1:0,23:26:71.08:686,71,0	1/1:7,16:26:49.76:471,50,0	1/1:4,32:38:92.02:922,92,0	1/1:10,16:30:17.73:436,18,0	1/1:1,24:25:72.12:722,72,0	1/1:2,14:16:31.42:415,31,0	0/0:25,0:25:72.23:0,72,905	0/0:27,0:27:70.76:0,71,856	0/0:24,0:24:56.82:0,57,688	0/0:30,0:30:75.23:0,75,929	1/1:1,26:29:78.17:796,78,0	1/1:3,26:31:76.72:769,77,0	1/1:2,18:21:54.12:551,54,0
chr10	84068061	.	G	GAAAAATAAAAAT	8779.75	PASS	AC=28;AF=0.519;AN=54;BaseQRankSum=2.113;DP=432;FS=29.730;HRun=0;HaplotypeScore=153.9981;InbreedingCoeff=0.8311;MQ=69.15;MQ0=0;MQRankSum=-7.992;QD=38.01;ReadPosRankSum=-4.038;VQSLOD=2.3213;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:14:12.04:439,12,0	./.	0/0:16,0:14:12:0,12,168	0/0:24,0:17:12.28:0,12,302	0/0:17,0:17:33.10:0,33,1011	0/0:21,0:21:39.13:0,39,1342	0/0:6,0:6:6.02:0,6,206	1/1:33,0:28:36.10:1242,36,0	0/0:13,0:13:6.02:0,6,206	1/1:12,3:15:21.06:806,21,0	1/1:12,4:16:21.06:1008,21,0	0/0:24,0:24:36.12:0,36,1221	0/0:13,0:13:18.06:0,18,619	0/0:11,0:11:12.04:0,12,371	1/1:13,0:14:6.02:314,6,0	1/1:12,1:13:6.02:333,6,0	1/1:16,1:16:15.05:558,15,0	1/1:9,0:9:9.03:309,9,0	1/1:29,0:29:27.09:952,27,0	1/1:8,0:8:3.01:157,3,0	0/0:7,0:7:3.01:0,3,36	0/0:9,0:9:9.03:0,9,279	0/0:16,0:16:27.09:0,27,895	0/0:18,0:18:33.10:0,33,967	1/1:17,2:19:18.06:926,18,0	1/1:11,0:10:12.04:579,12,0	1/1:21,0:22:6.01:234,6,0	1/1:6,0:10:18.06:921,18,0
chr10	84068113	.	TTGACTCAG	T	9294.48	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=11.290;DP=436;FS=30.104;HRun=0;HaplotypeScore=112.8429;InbreedingCoeff=0.9795;MQ=52.18;MQ0=43;MQRankSum=-12.773;QD=70.41;ReadPosRankSum=1.170;VQSLOD=3.0877;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.15:0,45,1979	1/1:0,3:3:9.03:258,9,0	0/0:48,0:14:30.51:0,31,1159	0/0:24,0:8:24.08:0,24,777	0/0:25,0:25:72.23:0,72,3035	0/0:21,0:21:60.21:0,60,2643	0/0:14,0:14:42.14:0,42,1833	1/1:6,16:20:39.13:1119,39,0	0/0:11,0:11:30.10:0,30,1333	1/1:4,12:16:36.12:1032,36,0	1/1:2,12:14:36.12:1032,36,0	0/0:18,0:18:51.17:0,51,2089	0/0:12,0:12:33.11:0,33,1414	0/0:14,0:14:42.14:0,42,1868	1/1:0,6:6:18.06:516,18,0	1/1:0,11:11:33.11:947,33,0	1/1:0,11:10:30.10:861,30,0	1/1:0,6:5:15.05:430,15,0	1/1:2,12:13:30.10:861,30,0	1/1:1,11:12:30.10:860,30,0	1/1:1,3:4:9.03:258,9,0	0/0:11,0:11:33.11:0,33,1475	0/0:18,0:18:45.15:0,45,1916	0/0:26,0:26:69.24:0,69,2861	0/0:18,0:18:48.16:0,48,2127	0/0:14,0:12:33.08:0,33,1361	1/1:0,13:13:39.13:1119,39,0	0/0:13,0:13:33.11:0,33,1474
chr10	84068174	.	C	CAATA	4157.14	PASS	AB=0.978;AC=17;AF=0.304;AN=56;BaseQRankSum=9.032;DP=475;FS=3.286;HRun=0;HaplotypeScore=131.8716;InbreedingCoeff=0.7355;MQ=50.50;MQ0=3;MQRankSum=-6.466;QD=26.82;ReadPosRankSum=0.911;VQSLOD=3.6809;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,4:27:62.95:863,63,0	1/1:3,1:4:8.91:115,9,0	0/0:22,0:16:41.84:0,42,400	0/0:23,0:13:31.78:0,32,284	0/0:26,0:26:65.03:0,65,871	0/0:20,0:20:57.06:0,57,793	0/0:14,0:14:35.98:0,36,403	0/0:27,0:23:60.02:0,60,694	0/0:14,0:14:42.03:0,42,536	1/1:15,0:15:38.73:421,39,0	1/1:14,6:20:50.65:682,51,0	0/0:19,0:19:51.11:0,51,788	0/1:14,0:14:68.99:211,0,69	0/0:12,0:12:30.03:0,30,388	0/0:11,0:11:32.83:0,33,357	0/1:13,1:14:21.75:305,0,22	1/1:13,2:15:38.31:351,38,0	0/0:11,0:10:26.98:0,27,352	0/0:13,0:11:23.65:0,24,273	0/0:17,0:17:38.79:0,39,489	0/0:13,0:13:30.08:0,30,486	0/0:16,0:16:41.97:0,42,567	0/0:10,0:10:28.43:0,28,358	0/0:31,0:31:83.86:0,84,1104	0/1:22,0:22:99:374,0,117	1/1:9,3:12:26.98:457,27,0	0/0:21,0:21:56.57:0,57,635	1/1:10,1:11:33:378,33,0
chr10	84068177	.	T	TAAAC	2773.65	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=4.818;DP=476;FS=1.843;HRun=0;HaplotypeScore=136.8731;InbreedingCoeff=0.7775;MQ=50.67;MQ0=3;MQRankSum=-6.391;QD=17.67;ReadPosRankSum=0.083;VQSLOD=3.1387;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:27:41.53:485,42,0	1/1:5,0:5:8.99:107,9,0	0/0:22,0:16:5.98:0,6,47	0/0:22,0:13:5.83:0,6,33	0/0:27,0:27:38.11:0,38,549	0/0:20,0:20:36.11:0,36,551	0/0:11,0:12:17.98:0,18,153	0/0:27,0:23:23.94:0,24,235	0/0:14,0:14:21.03:0,21,286	1/1:14,0:14:15.02:215,15,0	1/1:20,0:20:32.68:425,33,0	0/0:18,0:18:39.09:0,39,553	1/1:5,9:14:14.71:359,15,0	0/0:12,0:12:17.98:0,18,233	0/0:11,0:11:20.48:0,20,207	0/1:15,0:15:27.03:189,0,27	1/1:15,0:15:20.72:161,21,0	0/0:10,0:9:21:0,21,234	0/0:14,0:12:9.92:0,10,150	0/0:18,0:18:29.98:0,30,341	0/0:13,0:13:29.89:0,30,340	0/0:17,0:17:29.95:0,30,420	0/0:11,0:11:21.05:0,21,306	0/0:30,0:30:53.75:0,54,668	1/1:8,13:22:27.09:648,27,0	0/1:13,0:13:13.64:246,0,14	0/0:21,0:21:27.02:0,27,311	1/1:11,0:11:14.87:143,15,0
chr10	84068215	.	AAT	A	1604.67	PASS	AB=0.954;AC=16;AF=0.286;AN=56;BaseQRankSum=5.717;DP=454;FS=11.639;HRun=0;HaplotypeScore=103.2960;InbreedingCoeff=0.1490;MQ=66.79;MQ0=1;MQRankSum=-2.249;QD=7.43;ReadPosRankSum=-3.469;VQSLOD=1.2567;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:30:99:128,0,222	0/1:5,0:5:7.03:7,0,67	0/0:14,0:14:39.02:0,39,577	0/0:10,0:10:20.93:0,21,272	0/0:18,0:18:54.18:0,54,991	0/0:19,0:19:57.20:0,57,1071	1/1:13,0:13:20.42:130,20,0	0/1:25,0:24:99:236,0,196	0/0:8,0:8:21.07:0,21,405	0/0:13,0:13:21.38:0,21,172	0/1:13,4:17:99:138,0,214	0/0:17,0:17:51.16:0,51,940	0/0:12,0:12:21.07:0,21,379	0/0:17,0:17:51.17:0,51,967	1/1:1,12:13:32.16:354,32,0	0/0:13,0:13:17.95:0,18,194	0/1:19,0:18:99:104,0,109	1/1:7,6:12:28.28:315,28,0	0/1:19,0:18:99:112,0,145	0/1:15,1:16:79.01:79,0,237	0/0:24,0:24:21.89:0,22,344	0/0:16,0:16:48.15:0,48,864	0/0:12,0:12:36.12:0,36,693	0/0:33,0:33:87.28:0,87,1582	0/0:12,0:12:30.10:0,30,569	0/1:19,0:17:99:159,0,136	0/1:11,4:15:13.28:13,0,245	0/1:11,0:11:3.59:4,0,134
chr10	84068218	.	A	AAATAAC	10354.17	PASS	AB=0.772;AC=32;AF=0.571;AN=56;BaseQRankSum=7.055;DP=474;FS=1.254;HRun=0;HaplotypeScore=118.2867;InbreedingCoeff=0.7080;MQ=69.57;MQ0=1;MQRankSum=-5.842;QD=33.62;ReadPosRankSum=0.715;VQSLOD=4.4146;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,4:28:57.15:1387,57,0	1/1:0,1:5:12.04:386,12,0	0/0:16,0:16:32.20:0,32,641	0/0:9,0:10:24.02:0,24,326	0/0:20,0:20:51.17:0,51,1134	0/0:19,0:19:57.20:0,57,1271	1/1:0,0:15:26.80:269,27,0	1/1:3,0:29:19.55:1024,20,0	0/0:9,0:9:24.08:0,24,518	1/1:1,11:14:36.12:995,36,0	1/1:9,6:17:51.17:1186,51,0	0/0:17,0:17:48.16:0,48,1029	0/1:12,0:12:9.92:10,0,108	0/0:17,0:17:51.17:0,51,1105	1/1:12,0:13:34.03:315,34,0	0/1:3,11:19:55.77:466,0,56	1/1:3,2:18:36.12:927,36,0	1/1:6,0:12:23.32:197,23,0	0/1:4,0:23:31.11:656,0,31	1/1:1,0:15:33.35:278,33,0	1/1:2,0:26:23.31:262,23,0	0/0:16,0:16:42.14:0,42,958	0/0:12,0:12:36.12:0,36,843	0/0:30,0:30:84.29:0,84,1778	0/1:12,0:12:25.16:25,0,46	1/1:0,3:17:51.17:1195,51,0	1/1:6,0:15:17.94:185,18,0	1/1:3,1:11:27.09:592,27,0
chr10	84068898	.	G	GA	2888.66	PASS	AB=0.923;AC=13;AF=0.232;AN=56;BaseQRankSum=-1.124;DP=581;FS=3.059;HRun=9;HaplotypeScore=63.9439;InbreedingCoeff=0.9105;MQ=63.95;MQ0=6;MQRankSum=0.407;QD=21.40;ReadPosRankSum=1.153;VQSLOD=4.6218;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:22:28.45:538,28,0	1/1:3,6:8:15.04:164,15,0	0/0:9,0:9:4.01:0,4,104	0/0:8,0:7:13.60:0,14,86	0/0:26,0:26:68.97:0,69,595	0/0:19,0:19:53.99:0,54,469	0/0:30,0:28:74.11:0,74,649	0/0:31,0:31:61.78:0,62,522	0/1:11,1:12:0.21:0,0,224	1/1:3,23:25:63.15:683,63,0	1/1:3,13:16:42.11:460,42,0	0/0:23,0:23:47.97:0,48,415	0/0:17,0:16:38.99:0,39,338	0/0:24,0:23:56.93:0,57,483	0/0:24,0:24:56.98:0,57,495	1/1:3,26:29:66.18:730,66,0	1/1:5,16:20:45.12:498,45,0	0/0:24,1:24:23.47:0,23,478	0/0:17,0:16:47.97:0,48,412	0/0:18,0:18:47.99:0,48,416	0/0:19,0:19:50.93:0,51,437	0/0:23,0:23:56.97:0,57,495	0/0:18,0:18:47.98:0,48,416	0/0:30,0:30:71.96:0,72,624	0/0:20,0:19:47.97:0,48,417	0/0:30,0:30:77.97:0,78,677	0/0:27,0:26:74.97:0,75,647	0/0:7,0:8:20.02:0,20,162
chr10	84071711	.	C	CAGTT	10060.63	PASS	AB=0.549;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.011;DP=839;FS=2.533;HRun=0;HaplotypeScore=133.7024;InbreedingCoeff=0.8365;MQ=82.97;MQ0=0;MQRankSum=-5.496;QD=73.98;ReadPosRankSum=1.030;VQSLOD=6.8012;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,52:61:99:4648,168,0	0/0:12,0:12:33.11:0,33,691	0/0:25,0:25:69.09:0,69,1220	0/0:24,0:24:64.90:0,65,1016	0/0:27,0:27:78.26:0,78,1591	0/0:28,0:27:84.24:0,84,1611	1/1:2,22:26:72.03:1853,72,0	0/0:31,0:31:90.29:0,90,1721	0/0:26,0:26:77.80:0,78,1499	0/0:28,0:28:75.26:0,75,1558	0/0:21,0:21:63.16:0,63,1275	0/0:38,0:38:99:0,111,2161	0/0:36,0:36:99:0,102,1982	0/0:32,0:32:96.32:0,96,1969	0/0:35,0:35:99:0,105,1986	0/0:42,0:42:99:0,126,2507	0/0:47,0:47:99:0,138,2704	0/0:33,0:33:99:0,99,1965	0/0:21,0:21:63.10:0,63,1228	0/0:22,0:22:63.16:0,63,1220	0/0:51,0:51:99:0,150,2979	0/0:24,0:24:69.21:0,69,1368	0/0:18,0:18:51.09:0,51,951	0/0:26,0:26:78.27:0,78,1612	0/0:26,0:26:78.18:0,78,1432	0/1:7,29:39:59.02:2692,0,59	0/0:30,0:29:90.28:0,90,1769	1/1:0,10:10:30.10:868,30,0
chr10	84071991	.	TA	T	4590.99	PASS	AB=0.800;AC=30;AF=0.536;AN=56;BaseQRankSum=9.026;DP=693;FS=9.978;HRun=13;HaplotypeScore=82.2788;InbreedingCoeff=0.8253;MQ=71.03;MQ0=7;MQRankSum=-0.002;QD=11.17;ReadPosRankSum=0.888;VQSLOD=3.8014;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:29:32.10:109,32,0	1/1:2,10:12:29.83:219,30,0	0/0:34,1:18:10.68:0,11,99	0/1:32,0:15:1.16:1,0,54	0/0:26,0:26:56.26:0,56,708	0/0:17,0:19:47.75:0,48,436	0/0:6,1:20:10.13:0,10,166	1/1:9,25:35:81.77:573,82,0	0/0:16,2:18:4.69:0,5,354	1/1:7,20:29:38.48:436,38,0	1/1:7,17:24:48.54:352,49,0	0/0:29,0:29:70.66:0,71,671	0/0:15,1:17:13.94:0,14,273	0/0:19,0:21:47.90:0,48,446	1/1:5,16:21:44.70:328,45,0	1/1:4,17:21:18.39:261,18,0	1/1:7,30:37:51.38:540,51,0	1/1:5,23:28:22.39:321,22,0	1/1:6,18:26:9.16:324,9,0	1/1:3,25:31:67.92:469,68,0	0/1:3,6:9:5.45:91,0,5	0/0:17,0:19:38.70:0,39,339	0/0:26,2:28:0.19:0,0,498	0/0:21,0:23:56.76:0,57,524	0/0:25,1:27:49.63:0,50,603	1/1:6,0:24:30.31:89,30,0	1/1:7,22:29:29.53:371,30,0	1/1:0,0:23:36.67:108,37,0
chr10	84073512	.	TTCCC	T	877.69	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.157;DP=419;FS=0.954;HRun=0;HaplotypeScore=70.2235;InbreedingCoeff=0.8546;MQ=64.79;MQ0=3;MQRankSum=-1.083;QD=25.81;ReadPosRankSum=3.104;VQSLOD=3.3455;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,8:17:33.11:533,33,0	0/0:2,0:2:6.01:0,6,101	0/0:28,0:12:9.02:0,9,141	0/0:27,0:15:8.66:0,9,215	0/0:10,0:10:18.06:0,18,444	0/0:9,0:9:23.65:0,24,479	0/0:23,0:23:45.14:0,45,1038	0/0:25,0:25:16.28:0,16,265	0/0:18,0:18:33.04:0,33,674	0/0:15,0:15:18.06:0,18,446	0/0:7,0:7:15.05:0,15,361	0/0:24,0:24:54.12:0,54,1016	0/0:9,0:9:18.06:0,18,446	0/0:14,0:14:30.09:0,30,664	0/0:19,0:19:36.06:0,36,731	0/0:19,0:19:36.06:0,36,691	0/0:11,0:11:27.08:0,27,621	0/0:10,0:10:18.06:0,18,446	0/0:13,0:12:9.03:0,9,205	0/0:14,0:14:27.09:0,27,662	0/0:43,0:43:99:0,102,2193	0/0:7,0:7:18.04:0,18,351	0/0:8,0:8:21.07:0,21,519	0/0:13,0:13:30:0,30,579	0/0:9,0:9:22.32:0,22,519	1/1:7,6:13:21.06:329,21,0	0/0:8,0:8:15.03:0,15,249	1/1:0,4:4:9.03:151,9,0
chr10	84073578	.	A	ATCTC	1548.61	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=-3.194;DP=352;FS=1.795;HRun=0;HaplotypeScore=66.0561;InbreedingCoeff=0.9329;MQ=80.62;MQ0=1;MQRankSum=-2.770;QD=46.93;ReadPosRankSum=2.493;VQSLOD=4.2648;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:17:36.12:933,36,0	./.	0/0:19,0:16:29.76:0,30,486	0/0:38,0:32:52.39:0,52,872	0/0:11,0:11:30.09:0,30,482	0/0:8,0:8:21.07:0,21,372	0/0:23,0:23:48.15:0,48,821	0/0:16,0:16:40.86:0,41,741	0/0:11,0:11:30.10:0,30,510	0/0:13,0:13:33.01:0,33,554	0/0:6,0:6:18.06:0,18,318	0/0:20,0:20:54.15:0,54,910	0/0:10,0:10:27.09:0,27,478	0/0:10,0:10:30.10:0,30,539	0/0:15,0:15:42.14:0,42,749	0/0:12,0:12:36.12:0,36,647	0/0:11,0:11:33.11:0,33,577	0/0:8,0:8:18.06:0,18,323	0/0:8,0:8:21.07:0,21,369	0/0:10,0:10:30.10:0,30,525	0/0:27,0:26:63.21:0,63,1097	0/0:7,0:7:16.87:0,17,274	0/0:9,0:9:21.07:0,21,371	0/0:12,0:12:27.09:0,27,484	0/0:4,0:4:12.04:0,12,216	1/1:4,8:12:24.08:593,24,0	0/0:8,0:8:21.07:0,21,377	1/1:2,2:4:6.02:156,6,0
chr10	84073646	.	G	GTC	355.97	PASS	AB=1.000;AC=3;AF=0.056;AN=54;BaseQRankSum=-0.722;DP=335;FS=4.369;HRun=0;HaplotypeScore=49.4308;InbreedingCoeff=0.5374;MQ=76.44;MQ0=2;MQRankSum=0.515;QD=8.09;ReadPosRankSum=-1.292;VQSLOD=2.6541;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.14:0,45,565	0/0:2,0:2:6.01:0,6,63	0/0:22,0:17:5.43:0,5,262	0/1:31,0:18:3.51:4,0,243	0/0:12,0:12:30.10:0,30,378	0/0:8,0:8:21.07:0,21,265	1/1:3,10:13:27.09:449,27,0	0/0:13,0:13:30.09:0,30,374	0/0:17,0:17:45.14:0,45,567	0/0:14,0:14:36.10:0,36,426	0/0:9,0:9:24.06:0,24,290	0/0:12,0:12:33.11:0,33,416	0/0:13,0:13:30.08:0,30,365	0/0:12,0:12:36.12:0,36,453	0/0:16,0:16:39.12:0,39,491	0/0:13,0:13:36.10:0,36,441	0/0:15,0:15:39.10:0,39,476	0/0:11,0:11:27.09:0,27,338	0/0:9,0:9:18.01:0,18,197	0/0:7,0:7:18.06:0,18,227	0/0:15,0:15:45.14:0,45,567	0/0:9,0:9:27.07:0,27,325	0/0:12,0:12:33.08:0,33,400	0/0:9,0:9:24.06:0,24,287	0/0:7,0:7:18.06:0,18,227	0/0:12,0:12:36.12:0,36,454	0/0:4,0:4:3.01:0,3,38	./.
chr10	84074978	.	A	AT	954.76	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.181;DP=584;FS=5.451;HRun=9;HaplotypeScore=56.2368;InbreedingCoeff=0.8979;MQ=59.52;MQ0=3;MQRankSum=0.406;QD=25.13;ReadPosRankSum=0.749;VQSLOD=4.4951;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,1248	0/0:3,0:3:6:0,6,52	0/0:20,0:15:20.97:0,21,177	0/0:10,0:4:5.99:0,6,52	0/0:24,0:24:62.96:0,63,543	0/0:21,0:21:53.94:0,54,463	0/0:19,0:19:53.98:0,54,469	0/0:34,0:34:83.96:0,84,729	0/0:16,0:16:44.99:0,45,391	0/0:17,0:17:35.98:0,36,312	0/0:13,0:13:26.96:0,27,231	0/0:17,0:17:38.96:0,39,338	0/0:17,0:17:34.93:0,35,393	0/0:13,0:13:32.99:0,33,286	0/0:31,0:31:80.94:0,81,699	0/0:29,0:29:77.98:0,78,677	0/0:30,0:30:74.96:0,75,645	0/0:19,0:20:43.98:0,44,364	0/0:19,0:18:44.97:0,45,390	0/0:19,0:19:38.94:0,39,335	0/0:27,0:28:68.01:0,68,579	0/0:21,0:21:56.98:0,57,495	0/0:12,0:12:29.96:0,30,257	0/0:20,0:19:59.99:0,60,521	0/0:18,0:18:50.99:0,51,443	1/1:2,22:25:66.01:711,66,0	0/0:25,0:25:65.97:0,66,572	1/1:2,11:13:33.09:365,33,0
chr10	84076086	.	TTCTCTCTCTCTCTCTCTC	T	7684.09	PASS	AB=0.860;AC=21;AF=0.389;AN=54;BaseQRankSum=3.406;DP=550;FS=36.151;HRun=0;HaplotypeScore=238.9695;InbreedingCoeff=0.7490;MQ=64.24;MQ0=4;MQRankSum=-3.610;QD=40.44;ReadPosRankSum=1.435;VQSLOD=2.8070;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:29:24.06:0,24,312	1/1:2,5:7:9.46:212,9,0	0/0:27,0:13:17.97:0,18,306	0/0:41,0:23:23.80:0,24,305	0/0:27,0:27:44.96:0,45,2325	0/0:27,0:28:60.21:0,60,3127	0/0:12,0:22:27.08:0,27,743	0/1:23,0:23:24.74:544,0,25	0/0:16,0:19:39.12:0,39,2308	1/1:7,16:23:48.16:1734,48,0	1/1:2,8:9:18.02:345,18,0	0/0:25,0:25:57.20:0,57,3987	0/0:16,0:18:48.15:0,48,2524	0/0:19,0:19:39.13:0,39,1838	1/1:2,20:22:21.07:820,21,0	1/1:3,10:13:12.04:516,12,0	1/1:16,1:17:27.09:685,27,0	0/1:5,13:18:13.13:190,0,13	1/1:10,7:16:21.05:788,21,0	1/1:3,7:10:18.06:544,18,0	0/1:16,0:16:61.85:427,0,62	0/0:15,0:15:27.09:0,27,1072	0/0:8,0:8:24.08:0,24,1381	0/0:30,0:33:64.52:0,65,3853	0/0:6,0:18:18.06:0,18,452	0/0:8,0:21:39.60:0,40,626	1/1:1,13:14:21.03:879,21,0	./.
chr10	84076246	.	T	TCTGCCTGC	1680.88	PASS	AB=0.844;AC=20;AF=0.400;AN=50;BaseQRankSum=0.265;DP=440;FS=4.196;HRun=0;HaplotypeScore=107.5981;InbreedingCoeff=0.7018;MQ=64.01;MQ0=2;MQRankSum=-7.250;QD=9.14;ReadPosRankSum=-2.167;VQSLOD=1.6588;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:30.05:0,30,649	1/1:4,0:4:6.02:136,6,0	0/0:27,0:24:12.02:0,12,144	0/0:32,0:27:4.71:0,5,47	./.	0/0:12,0:12:21.07:0,21,466	0/0:13,0:28:12.04:0,12,223	1/1:9,0:9:6.01:66,6,0	0/0:12,0:12:21.06:0,21,479	1/1:12,0:12:6.01:68,6,0	./.	0/0:14,0:14:15.05:0,15,379	0/0:15,0:15:21.07:0,21,505	0/0:19,0:19:27.08:0,27,600	1/1:5,15:21:30.10:818,30,0	1/1:10,0:20:3.01:40,3,0	1/1:13,0:30:12.04:333,12,0	1/1:13,4:19:3.01:124,3,0	1/1:21,0:21:14.96:206,15,0	0/1:2,0:2:0:0,0,0	0/1:18,11:33:0:0,0,0	0/0:6,0:6:3.01:0,3,76	./.	0/0:41,0:41:76.85:0,77,1828	0/0:5,0:5:3.01:0,3,76	0/0:7,0:7:12.04:0,12,234	1/1:6,7:13:3.01:56,3,0	0/0:9,0:9:15.05:0,15,379
chr10	84076445	.	G	GAGGCAGGC	2059.94	PASS	AB=0.990;AC=19;AF=0.475;AN=40;BaseQRankSum=2.801;DP=513;FS=1.695;HRun=0;HaplotypeScore=127.9536;InbreedingCoeff=0.3704;MQ=59.97;MQ0=3;MQRankSum=-4.243;QD=9.41;ReadPosRankSum=-1.942;VQSLOD=1.9990;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:3.01:54,3,0	1/1:1,0:2:3.01:49,3,0	0/0:25,0:15:9.01:0,9,88	./.	./.	0/0:11,0:11:3.01:0,3,48	0/0:40,0:40:0.52:0,1,355	0/0:13,0:13:2.98:0,3,21	0/0:16,0:16:15.05:0,15,377	1/1:11,0:11:6.02:113,6,0	./.	0/0:24,0:24:24.07:0,24,454	0/0:9,0:9:9.03:0,9,187	0/0:23,0:23:27.09:0,27,615	1/1:21,8:32:18:619,18,0	1/1:22,0:22:12:363,12,0	0/1:33,0:34:23.16:643,0,23	1/1:13,11:25:4.11:128,4,0	1/1:11,0:10:3.01:84,3,0	./.	0/1:39,0:39:69.41:69,0,105	./.	./.	0/0:42,0:42:23.22:0,23,1151	./.	./.	0/1:10,0:10:74.92:75,0,110	1/1:5,0:5:2.80:7,3,0
chr10	84076476	.	G	GCAGGCAGA	3039.64	PASS	AB=0.794;AC=26;AF=0.481;AN=54;BaseQRankSum=3.545;DP=450;FS=29.629;HRun=0;HaplotypeScore=97.2902;InbreedingCoeff=0.4540;MQ=56.66;MQ0=8;MQRankSum=-3.289;QD=10.67;ReadPosRankSum=-0.084;VQSLOD=0.5398;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:32:3.95:74,4,0	1/1:3,0:3:6.48:99,6,0	0/0:22,0:18:41.90:0,42,374	0/0:20,0:12:24.06:0,24,264	./.	0/0:5,0:5:11.99:0,12,101	0/1:16,0:38:99:111,0,166	1/1:22,0:21:27.34:344,27,0	0/0:15,0:15:41.99:0,42,628	1/1:4,0:4:9.02:127,9,0	1/1:4,0:3:3.47:26,3,0	0/0:21,0:21:54.01:0,54,734	0/0:11,0:10:23.86:0,24,312	0/0:19,0:19:57.03:0,57,931	0/1:26,0:26:99:258,0,317	1/1:5,15:22:12.47:414,12,0	0/1:3,24:32:3.29:695,0,3	0/1:21,0:21:95.87:96,0,155	1/1:14,0:13:14.93:116,15,0	1/1:4,0:4:11.99:100,12,0	0/1:31,0:31:13.85:449,0,14	0/0:3,0:3:5.28:0,5,51	0/0:6,0:6:8.33:0,8,61	0/0:33,0:33:64.07:0,64,1447	0/0:7,0:7:14.83:0,15,108	1/1:11,0:11:18.48:165,18,0	0/1:5,0:14:43.05:106,0,43	1/1:2,0:6:6:51,6,0
chr10	84076852	.	TA	T	1384.27	PASS	AB=0.706;AC=24;AF=0.429;AN=56;BaseQRankSum=1.951;DP=519;FS=3.283;HRun=17;HaplotypeScore=61.5975;InbreedingCoeff=0.3315;MQ=70.17;MQ0=8;MQRankSum=1.736;QD=4.91;ReadPosRankSum=3.869;VQSLOD=1.6395;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,4:19:21.77:22,0,225	0/1:1,5:6:9.21:52,0,9	0/0:43,0:12:7.06:0,7,58	0/0:27,0:15:7.04:0,7,66	0/0:26,1:27:40.48:0,40,395	0/0:15,1:22:15.67:0,16,188	0/0:8,0:13:20.02:0,20,105	0/1:8,16:25:4.82:162,0,5	0/1:11,1:13:9.27:9,0,108	1/1:8,11:19:25.75:148,26,0	0/1:5,11:16:24.25:88,0,24	0/0:22,0:22:30.97:0,31,279	0/0:13,0:13:20.93:0,21,163	0/0:14,2:16:16.15:0,16,220	1/1:9,16:26:30.09:264,30,0	0/1:13,8:21:33.22:102,0,33	1/1:15,15:32:15:163,15,0	1/1:10,5:20:17.18:126,17,0	1/1:8,0:9:4.69:22,5,0	0/1:8,4:15:43.53:44,0,46	0/1:6,2:9:25.31:25,0,32	0/0:11,0:11:22.75:0,23,170	0/0:15,1:17:3.72:0,4,173	0/0:4,0:4:5.99:0,6,48	0/0:6,0:21:28.71:0,29,160	1/1:7,10:18:11.78:152,12,0	1/1:5,8:14:19.19:101,19,0	1/1:10,9:19:1.88:95,2,0
chr10	84078877	.	T	TC	18288.55	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-15.699;DP=707;FS=4.191;HRun=0;HaplotypeScore=67.1137;InbreedingCoeff=0.9995;MQ=87.27;MQ0=0;MQRankSum=-3.102;QD=41.85;ReadPosRankSum=2.091;VQSLOD=5.6787;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:99:1768,111,0	1/1:0,10:10:23.88:382,24,0	0/0:32,0:32:93.22:0,93,1205	0/0:14,0:14:36.12:0,36,490	0/0:23,0:23:69.23:0,69,964	0/0:18,0:18:54.17:0,54,737	1/1:0,19:19:51.17:813,51,0	1/1:0,31:31:87.28:1357,87,0	0/0:31,0:31:93.27:0,93,1235	1/1:0,25:25:75.19:1138,75,0	1/1:1,16:17:36.12:567,36,0	0/0:29,0:29:87.26:0,87,1182	0/0:26,0:26:78.23:0,78,1048	0/0:30,0:30:87.27:0,87,1196	1/1:0,40:40:99:1721,108,0	1/1:0,36:35:93.32:1483,93,0	1/1:0,29:29:78.27:1244,78,0	1/1:0,13:13:36.12:574,36,0	1/1:0,25:25:72.15:1088,72,0	1/1:0,23:23:63.08:935,63,0	1/1:0,40:40:99:1767,111,0	0/0:26,0:26:75.21:0,75,970	0/0:19,0:19:54.17:0,54,720	0/0:22,0:22:66.20:0,66,889	1/1:0,20:20:45.15:715,45,0	1/1:0,22:22:60.04:923,60,0	1/1:1,36:38:87.30:1381,87,0	1/1:0,10:10:27.09:431,27,0
chr10	84079858	.	T	TA	541.75	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=-5.922;DP=171;FS=1.037;HRun=5;HaplotypeScore=17.4939;InbreedingCoeff=0.5217;MQ=81.28;MQ0=1;MQRankSum=-0.296;QD=27.09;ReadPosRankSum=0.711;VQSLOD=1.8541;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:27.09:355,27,0	0/0:2,0:2:6.02:0,6,64	0/0:4,0:4:6.45:0,6,64	0/0:13,0:10:14.68:0,15,141	0/0:1,0:1:3.01:0,3,32	0/0:4,0:4:12.03:0,12,129	0/0:5,0:5:12.03:0,12,129	0/0:42,0:42:99:0,108,1150	0/0:6,0:6:18.05:0,18,193	0/0:3,0:3:9.02:0,9,96	0/0:2,0:2:6.02:0,6,64	0/0:6,0:6:15.04:0,15,161	0/0:1,0:1:2.98:0,3,21	0/0:1,0:1:3.01:0,3,32	0/0:1,0:1:2.99:0,3,24	0/0:3,0:3:9.02:0,9,97	0/0:17,0:17:33.08:0,33,355	0/0:17,0:17:39.09:0,39,419	0/0:6,0:6:18.05:0,18,193	0/0:1,0:1:3.01:0,3,32	0/0:2,0:2:6.02:0,6,64	./.	0/0:1,0:1:3.01:0,3,32	0/0:4,0:4:6.01:0,6,64	0/0:3,0:3:9.02:0,9,97	1/1:1,3:4:9.03:118,9,0	0/0:5,0:5:12.03:0,12,129	1/1:1,5:6:15.05:197,15,0
chr10	84080650	.	C	CA	916.42	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.469;DP=739;FS=5.440;HRun=7;HaplotypeScore=76.5852;InbreedingCoeff=0.9868;MQ=80.34;MQ0=0;MQRankSum=0.391;QD=28.64;ReadPosRankSum=-1.276;VQSLOD=3.8204;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:57:99:0,165,1587	0/0:9,0:9:27.04:0,27,261	0/0:20,0:20:29.72:0,30,350	0/0:24,0:24:13.59:0,14,358	0/0:34,0:34:87.12:0,87,840	0/0:28,0:27:75.11:0,75,724	0/0:23,0:24:65.12:0,65,608	0/0:33,0:33:72.10:0,72,694	0/0:32,0:32:87.14:0,87,840	0/0:26,0:26:72.11:0,72,695	0/0:14,0:14:36.06:0,36,348	0/0:16,0:16:39.02:0,39,368	0/0:20,0:20:57.08:0,57,545	0/0:30,0:30:90.15:0,90,869	0/0:36,0:36:96.13:0,96,921	0/0:29,0:29:78.11:0,78,748	0/0:35,0:35:99:0,102,985	0/0:14,0:14:39.06:0,39,377	0/0:13,0:13:36.06:0,36,348	0/0:17,0:17:45.07:0,45,435	0/0:36,0:36:99:0,99,956	0/0:31,0:31:78.10:0,78,747	0/0:28,0:28:78.09:0,78,737	0/0:31,0:31:90.14:0,90,869	0/0:29,0:29:81.13:0,81,782	1/1:2,21:23:63.17:748,63,0	0/0:40,0:40:99:0,117,1110	1/1:0,9:9:24.07:290,24,0
chr10	84082116	.	AC	A	3544.61	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.764;DP=718;FS=0.418;HRun=1;HaplotypeScore=77.2514;InbreedingCoeff=0.9975;MQ=91.62;MQ0=0;MQRankSum=-1.275;QD=39.83;ReadPosRankSum=2.644;VQSLOD=4.3209;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,51:50:99:1992,144,0	0/0:9,0:9:24.08:0,24,383	0/0:26,0:26:78.23:0,78,1184	0/0:33,0:33:96.32:0,96,1487	0/0:23,0:23:69.22:0,69,1068	0/0:16,0:16:45.15:0,45,718	0/0:28,0:28:84.29:0,84,1337	0/0:31,0:31:93.32:0,93,1487	0/0:19,0:19:57.19:0,57,911	0/0:18,0:18:54.18:0,54,863	0/0:20,0:20:57.19:0,57,909	0/0:39,0:39:99:0,117,1868	0/0:24,0:24:69.24:0,69,1102	0/0:30,0:30:84.27:0,84,1313	0/0:46,0:46:99:0,135,2135	0/0:34,0:34:99:0,102,1630	0/0:31,0:31:93.32:0,93,1486	0/0:16,0:16:48.16:0,48,767	0/0:21,0:21:63.21:0,63,1006	0/0:11,0:11:33.11:0,33,527	0/0:45,0:44:99:0,126,1983	0/0:10,0:10:30.10:0,30,479	0/0:14,0:14:42.14:0,42,671	0/0:43,0:43:99:0,107,1919	0/0:12,0:12:36.12:0,36,576	1/1:0,31:30:90.30:1259,90,0	0/0:30,0:30:87.25:0,87,1320	1/1:0,7:7:21.07:294,21,0
chr10	84082170	.	TTGTG	T	235.78	PASS	AC=10;AF=0.200;AN=50;BaseQRankSum=2.693;DP=617;FS=2.879;HRun=0;HaplotypeScore=115.7149;InbreedingCoeff=0.6094;MQ=65.57;MQ0=9;MQRankSum=-2.094;QD=2.02;ReadPosRankSum=2.021;VQSLOD=2.3356;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:43:36.12:0,36,676	./.	0/0:31,0:22:0.47:0,0,1	./.	0/0:16,0:15:9.03:0,9,211	0/0:10,0:10:12.01:0,12,163	0/0:32,0:31:12.04:0,12,218	0/0:25,0:25:3.92:0,4,14	0/0:23,0:23:21.05:0,21,386	0/0:19,0:19:12.51:0,13,200	0/0:12,0:14:3.01:0,3,50	0/0:26,0:28:20.78:0,21,334	0/0:16,0:16:6.02:0,6,137	0/0:20,0:20:14.52:0,15,190	0/0:41,0:41:30.08:0,30,545	0/0:25,0:24:15.52:0,16,263	0/0:33,0:32:33.07:0,33,642	0/0:14,0:14:16.30:0,16,315	0/0:19,0:19:1.25:0,1,3	./.	1/1:45,6:50:9.03:139,9,0	0/0:7,0:7:3.01:0,3,66	0/0:10,0:10:3.01:0,3,47	0/0:30,0:32:32.53:0,33,506	1/1:8,0:10:3:28,3,0	1/1:19,0:19:2.30:27,2,0	1/1:21,2:25:8.66:120,9,0	1/1:9,0:11:6.01:56,6,0
chr10	84082482	.	CACACAG	C	1607.89	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=9.271;DP=602;FS=4.077;HRun=0;HaplotypeScore=139.4752;InbreedingCoeff=0.0503;MQ=62.11;MQ0=13;MQRankSum=0.298;QD=7.66;ReadPosRankSum=-5.856;VQSLOD=0.0888;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,7:31:45.87:460,46,0	0/0:4,0:4:5.88:0,6,101	0/0:27,0:16:33.96:0,34,438	0/0:40,0:22:53.49:0,53,638	0/0:15,0:15:38.96:0,39,474	0/0:15,0:15:42.01:0,42,792	0/1:40,0:39:99:242,0,405	0/1:20,0:20:99:259,0,226	0/0:27,0:26:62.81:0,63,1395	0/0:24,0:24:65.26:0,65,1245	0/0:14,0:14:21.44:0,21,174	0/0:20,0:20:57.06:0,57,1554	0/0:18,0:18:54.14:0,54,1622	0/0:20,0:20:48.06:0,48,1295	0/0:24,0:24:32.17:0,32,380	0/0:21,0:19:41.89:0,42,521	0/0:22,0:21:43.16:0,43,729	0/0:20,0:17:41.97:0,42,877	0/1:26,0:26:99:208,0,546	./.	0/1:45,0:44:99:357,0,171	0/0:11,0:11:23.72:0,24,477	0/0:13,0:12:33.02:0,33,552	0/0:40,0:40:99:0,106,3076	0/0:7,0:7:9:0,9,156	0/1:25,0:23:96.47:96,0,745	0/1:17,0:15:96.42:96,0,324	0/1:5,0:5:32.90:33,0,70
chr10	84082486	.	CAG	C	1904.47	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=10.692;DP=591;FS=10.048;HRun=0;HaplotypeScore=102.2766;InbreedingCoeff=0.6657;MQ=63.80;MQ0=9;MQRankSum=-0.472;QD=9.43;ReadPosRankSum=-2.532;VQSLOD=1.7752;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:28:47.81:388,48,0	0/0:4,0:4:5.99:0,6,50	0/0:25,0:17:46.34:0,46,450	0/0:35,0:21:50.01:0,50,511	0/0:17,0:17:44.93:0,45,398	0/0:14,0:14:35.96:0,36,390	1/1:40,0:39:33.16:373,33,0	1/1:18,0:18:41.81:353,42,0	0/0:28,0:27:57.58:0,58,707	0/0:22,0:22:48.05:0,48,571	0/0:15,0:15:20.97:0,21,174	0/0:22,0:22:57.02:0,57,812	0/0:18,0:18:53.46:0,53,791	0/0:19,0:19:56.99:0,57,741	0/0:23,0:23:25.72:0,26,223	0/0:22,0:20:44.81:0,45,379	0/0:22,0:21:41.72:0,42,418	0/0:19,0:17:32.85:0,33,399	0/1:23,0:23:24.49:226,0,24	./.	1/1:45,0:44:27.79:410,28,0	0/0:12,0:12:17.98:0,18,284	0/0:12,0:12:29.95:0,30,302	0/0:42,0:42:79.30:0,79,1403	0/0:9,0:9:15:0,15,149	0/1:25,0:23:73.68:163,0,74	0/1:17,0:15:13.77:107,0,14	1/1:5,0:5:8.93:64,9,0
chr10	84082861	.	T	TTTG	5017.26	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-1.516;DP=630;FS=7.299;HRun=0;HaplotypeScore=91.6002;InbreedingCoeff=0.9987;MQ=84.39;MQ0=0;MQRankSum=-2.925;QD=49.68;ReadPosRankSum=1.807;VQSLOD=7.0822;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:35:90.31:1883,90,0	0/0:11,0:11:33.10:0,33,476	0/0:20,0:19:42.13:0,42,607	0/0:32,0:32:56.92:0,57,768	0/0:25,0:25:66.17:0,66,924	0/0:19,0:19:45.15:0,45,673	1/1:2,23:26:57.20:1195,57,0	0/0:30,0:30:72.22:0,72,1024	0/0:21,0:21:60.20:0,60,898	0/0:29,0:29:63.21:0,63,931	0/0:19,0:19:51.17:0,51,762	0/0:22,0:22:60.20:0,60,895	0/0:13,0:13:27.09:0,27,404	0/0:20,0:20:51.16:0,51,743	0/0:27,0:27:57.18:0,57,835	0/0:16,0:16:45.14:0,45,655	0/0:30,0:29:72.20:0,72,1014	0/0:22,0:22:63.19:0,63,921	0/0:34,0:34:90.29:0,90,1311	0/0:13,0:13:27.08:0,27,384	0/0:32,0:32:84.27:0,84,1238	0/0:14,0:14:39.11:0,39,563	0/0:22,0:22:60.20:0,60,897	0/0:30,0:30:75.25:0,75,1102	0/0:14,0:14:36.12:0,36,539	1/1:3,22:26:27.35:1310,27,0	0/0:14,0:14:30.10:0,30,448	1/1:3,11:14:30.10:629,30,0
chr10	84083800	.	C	CAAA	3712.48	PASS	AB=0.879;AC=29;AF=0.518;AN=56;BaseQRankSum=2.465;DP=544;FS=2.832;HRun=13;HaplotypeScore=98.6029;InbreedingCoeff=0.7089;MQ=48.17;MQ0=26;MQRankSum=-7.957;QD=11.49;ReadPosRankSum=-7.014;VQSLOD=-0.5512;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:11,4:31:39.57:551,40,0	1/1:7,0:7:5.99:65,6,0	0/1:9,0:5:6.18:6,0,53	0/0:5,0:3:2.81:0,3,15	0/0:17,0:19:20.05:0,20,250	0/0:8,0:15:22.18:0,22,238	1/1:17,0:14:11.79:55,12,0	1/1:14,15:32:51.91:685,52,0	0/0:13,0:15:13.05:0,13,125	1/1:22,0:18:21.17:111,21,0	0/1:19,0:15:16.48:16,0,18	0/0:18,0:18:35.79:0,36,382	0/0:13,0:13:28.94:0,29,281	0/0:16,0:15:32.83:0,33,337	0/0:22,0:25:51.89:0,52,606	1/1:21,0:17:9.43:53,9,0	1/1:18,0:12:5.63:30,6,0	0/0:11,0:10:21.91:0,22,216	1/1:13,8:20:34.96:434,35,0	1/1:4,12:17:27.56:425,28,0	0/1:6,7:14:10.83:233,0,11	0/0:26,0:30:62.30:0,62,565	0/0:14,0:18:24.12:0,24,246	0/0:34,0:34:45.29:0,45,509	1/1:11,0:8:7.02:47,7,0	1/1:14,5:34:54.15:705,54,0	1/1:8,11:24:21.79:259,22,0	1/1:15,0:10:5.81:37,6,0
chr10	84083804	.	A	AG	199.36	PASS	AB=0.823;AC=5;AF=0.089;AN=56;BaseQRankSum=4.955;DP=540;FS=0.000;HRun=0;HaplotypeScore=87.8961;InbreedingCoeff=-0.1106;MQ=49.35;MQ0=20;MQRankSum=-1.541;QD=1.99;ReadPosRankSum=-1.960;VQSLOD=2.1533;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:30:42.58:0,43,237	0/0:7,0:7:5.58:0,6,32	0/0:10,0:6:17.76:0,18,164	0/0:6,0:4:2.93:0,3,49	0/0:21,0:21:47.11:0,47,506	0/0:13,0:13:27.53:0,28,351	0/1:18,0:15:53.34:66,0,53	0/0:32,0:31:73.88:0,74,467	0/0:15,0:15:26.54:0,27,262	0/1:14,8:20:93.96:94,0,148	0/1:21,0:17:40.37:112,0,40	0/0:17,0:17:51.02:0,51,599	0/0:14,0:14:42.01:0,42,474	0/0:18,0:17:44.92:0,45,512	0/0:26,0:25:72.12:0,72,879	0/1:8,13:19:23.61:24,0,46	0/1:12,5:11:21.23:21,0,58	0/0:10,0:9:24.06:0,24,314	0/0:20,0:19:48.80:0,49,361	0/0:17,0:17:32.71:0,33,187	0/0:11,0:11:23.15:0,23,159	0/0:28,0:28:80.96:0,81,905	0/0:18,0:18:49.75:0,50,512	0/0:34,0:33:69.02:0,69,826	0/0:12,0:9:23.82:0,24,174	0/0:37,0:36:88.77:0,89,582	0/0:25,0:24:27.96:0,28,191	0/0:15,0:10:20.79:0,21,143
chr10	84083809	.	A	AAAAAAAAAAAAAAGAAAAG	5756.08	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=4.026;DP=548;FS=17.417;HRun=0;HaplotypeScore=260.9535;InbreedingCoeff=0.3818;MQ=51.43;MQ0=15;MQRankSum=-8.362;QD=17.77;ReadPosRankSum=-7.168;VQSLOD=0.9112;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:31:99:114,0,247	1/1:0,5:16:9.45:429,9,0	0/0:11,0:7:20.64:0,21,371	0/0:6,0:4:5.40:0,5,135	0/0:19,0:19:37.74:0,38,1313	0/0:13,0:13:26.48:0,26,1197	1/1:19,0:16:36.57:1103,37,0	0/1:34,0:33:99:212,0,533	0/0:17,0:17:32.83:0,33,917	1/1:21,0:19:48.07:1374,48,0	1/1:19,0:15:31.05:774,31,0	0/0:17,0:17:41.76:0,42,1331	0/0:13,0:13:30.95:0,31,981	0/0:17,0:16:44.99:0,45,1268	0/0:25,0:25:54.98:0,55,2485	1/1:24,0:21:17.51:357,18,0	1/1:17,0:11:18.46:262,18,0	0/0:8,0:8:23.72:0,24,715	0/1:24,0:23:99:118,0,251	0/1:18,0:18:99:169,0,161	0/1:11,0:11:18.57:19,0,277	0/0:26,0:26:68.93:0,69,2638	0/0:19,0:19:21.20:0,21,1207	0/0:33,0:32:47.37:0,47,1719	1/1:11,0:9:21.03:466,21,0	0/1:37,0:36:99:121,0,573	0/1:26,0:25:96.13:96,0,242	0/1:15,0:11:9.83:145,0,10
chr10	84084149	.	T	TGAG	9621.49	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-14.079;DP=743;FS=4.030;HRun=0;HaplotypeScore=114.2193;InbreedingCoeff=0.9992;MQ=75.11;MQ0=0;MQRankSum=-6.703;QD=45.82;ReadPosRankSum=3.366;VQSLOD=6.9232;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,99,1544	0/0:14,0:14:42.14:0,42,655	0/0:36,0:32:71.42:0,71,1008	0/0:50,0:47:82.58:0,83,1341	0/0:23,0:23:54.18:0,54,844	0/0:15,0:15:42.14:0,42,656	0/0:24,0:24:66.21:0,66,1005	1/1:4,23:28:72.22:1406,72,0	0/0:31,0:31:87.27:0,87,1311	0/0:29,0:29:81.26:0,81,1212	0/0:19,0:19:45.15:0,45,703	0/0:26,0:26:78.24:0,78,1172	0/0:31,0:31:84.27:0,84,1287	0/0:28,0:28:72.24:0,72,1119	1/1:4,32:36:81.28:1720,81,0	0/0:22,0:22:57.19:0,57,890	0/0:24,0:24:63.19:0,63,961	1/1:3,16:19:30.10:649,30,0	1/1:7,14:21:48.16:1025,48,0	1/1:2,20:22:54.18:1131,54,0	1/1:5,43:48:90.31:1938,90,0	0/0:26,0:26:66.22:0,66,1028	0/0:17,0:17:48.15:0,48,727	0/0:22,0:23:50.32:0,50,939	1/1:3,10:14:21.07:454,21,0	0/0:39,0:39:99:0,99,1516	1/1:2,20:22:60.21:1298,60,0	0/0:16,0:16:45.15:0,45,668
chr10	84084483	.	A	AGT	509.69	PASS	AB=0.600;AC=1;AF=0.018;AN=56;BaseQRankSum=-4.681;DP=777;FS=2.116;HRun=0;HaplotypeScore=99.7494;InbreedingCoeff=0.0399;MQ=69.27;MQ0=1;MQRankSum=-1.404;QD=14.16;ReadPosRankSum=-1.354;VQSLOD=3.0889;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:61.29:0,61,959	0/0:11,0:11:16.09:0,16,257	0/0:32,0:25:44.61:0,45,495	0/0:30,0:22:29.93:0,30,312	0/0:23,0:23:54.16:0,54,642	0/0:18,0:18:45.14:0,45,546	0/1:12,22:36:15:584,0,15	0/0:23,0:24:41.93:0,42,479	0/0:36,0:38:92.95:0,93,1083	0/0:23,0:23:48.14:0,48,582	0/0:21,0:22:50.93:0,51,568	0/0:29,0:29:75.23:0,75,909	0/0:40,0:41:99:0,103,1172	0/0:22,0:23:56.99:0,57,657	0/0:27,0:27:69.21:0,69,836	0/0:28,0:28:69.19:0,69,824	0/0:18,0:19:32.93:0,33,377	0/0:24,0:25:60:0,60,694	0/0:20,0:20:33.09:0,33,391	0/0:20,0:20:48.15:0,48,581	0/0:54,0:57:99:0,106,1493	0/0:25,0:25:63.19:0,63,764	0/0:23,0:23:51.16:0,51,619	0/0:31,0:32:81.08:0,81,960	0/0:22,0:25:71.71:0,72,795	0/0:42,0:42:99:0,105,1239	0/0:28,0:28:69.18:0,69,813	0/0:19,0:19:36.09:0,36,424
chr10	84084907	.	TG	T	3654.20	PASS	AB=0.889;AC=31;AF=0.574;AN=54;BaseQRankSum=7.499;DP=430;FS=3.535;HRun=9;HaplotypeScore=57.7653;InbreedingCoeff=0.8827;MQ=72.31;MQ0=2;MQRankSum=-1.734;QD=15.23;ReadPosRankSum=0.063;VQSLOD=3.7019;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:72.21:0,72,830	./.	0/0:23,0:17:36.70:0,37,367	0/0:19,0:16:5.47:0,5,175	0/0:12,0:12:33.10:0,33,381	0/0:16,0:16:39.12:0,39,450	1/1:3,18:21:51.03:467,51,0	1/1:5,12:17:33:298,33,0	0/0:12,0:12:33.10:0,33,381	1/1:2,12:14:39.02:357,39,0	1/1:0,11:12:32.05:281,32,0	0/0:28,0:28:72.13:0,72,813	0/1:14,2:16:15.80:16,0,333	0/0:16,0:16:48.13:0,48,543	1/1:2,0:16:30.07:88,30,0	1/1:3,14:17:39.01:357,39,0	1/1:2,11:13:33.02:302,33,0	1/1:3,0:15:24.44:72,24,0	1/1:6,4:10:14.89:120,15,0	1/1:1,8:9:23.95:210,24,0	1/1:5,20:25:51.02:466,51,0	0/0:13,0:13:30.08:0,30,337	0/0:6,0:6:15.04:0,15,172	0/0:10,0:10:27.08:0,27,312	1/1:1,0:11:19.58:57,20,0	1/1:0,1:20:41.71:141,42,0	1/1:2,17:19:45.01:411,45,0	1/1:2,0:4:4.07:12,4,0
chr10	84085143	.	GA	G	3877.71	PASS	AB=0.893;AC=34;AF=0.607;AN=56;BaseQRankSum=9.706;DP=508;FS=8.887;HRun=12;HaplotypeScore=62.6490;InbreedingCoeff=0.7844;MQ=66.67;MQ0=0;MQRankSum=-0.134;QD=10.80;ReadPosRankSum=2.639;VQSLOD=2.5540;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:27:64.56:492,65,0	1/1:3,0:7:9.08:39,9,0	0/1:11,1:12:63:63,0,82	0/0:4,0:3:8.92:0,9,68	0/0:16,0:16:36.07:0,36,365	0/0:12,0:12:27.04:0,27,269	1/1:3,11:15:31.91:238,32,0	1/1:10,14:24:38.81:300,39,0	0/0:14,1:16:11.97:0,12,324	1/1:2,0:21:39.58:123,40,0	1/1:1,1:12:23.36:82,23,0	0/1:16,3:19:30.55:31,0,260	0/0:19,0:21:41.74:0,42,388	0/0:19,0:19:42.07:0,42,421	1/1:2,15:18:31.92:238,32,0	1/1:3,0:14:18.32:53,18,0	1/1:6,0:31:50.92:147,51,0	1/1:6,16:23:49.84:377,50,0	1/1:2,15:19:21.13:318,21,0	1/1:7,12:20:28.85:215,29,0	1/1:8,27:36:41:503,41,0	0/0:15,0:15:36.95:0,37,362	0/0:9,2:11:0.75:0,1,177	0/0:16,0:16:36.07:0,36,365	0/0:18,0:19:49.34:0,49,490	1/1:2,0:22:41.07:120,41,0	1/1:5,25:31:43.55:510,44,0	1/1:2,0:8:10.16:29,10,0
chr10	84085552	.	TG	T	229.91	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.917;DP=494;FS=9.754;HRun=4;HaplotypeScore=76.6159;InbreedingCoeff=0.9388;MQ=74.31;MQ0=1;MQRankSum=-2.213;QD=22.99;ReadPosRankSum=-1.775;VQSLOD=1.8140;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:36.10:0,36,484	0/0:7,0:7:21.05:0,21,275	0/0:22,0:18:38.28:0,38,532	0/0:22,0:15:37.74:0,38,400	0/0:17,0:17:48.14:0,48,653	0/0:20,0:20:30.42:0,30,650	1/1:3,7:10:30.05:324,30,0	0/0:29,0:28:78.18:0,78,1001	0/0:14,0:14:39.13:0,39,541	0/0:13,0:13:36.11:0,36,474	0/0:20,0:20:44.04:0,44,658	0/0:17,0:17:45.02:0,45,573	0/0:19,0:19:54.17:0,54,736	0/0:18,0:18:54.18:0,54,753	0/0:20,0:20:54.09:0,54,651	0/0:13,0:13:30.10:0,30,420	0/0:24,0:24:69.16:0,69,923	0/0:18,0:18:48.13:0,48,605	0/0:17,0:17:51.14:0,51,672	0/0:25,0:25:63.16:0,63,839	0/0:19,0:19:48.16:0,48,671	0/0:13,0:13:36.12:0,36,499	0/0:17,0:17:37.93:0,38,598	0/0:17,0:17:45.14:0,45,609	0/0:12,0:12:30.07:0,30,379	0/0:19,0:19:50.50:0,51,427	0/0:30,0:30:84.06:0,84,1087	0/0:4,0:4:9:0,9,77
chr10	84085556	.	G	GT	446.12	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.501;DP=494;FS=0.892;HRun=8;HaplotypeScore=83.1418;InbreedingCoeff=0.8779;MQ=69.48;MQ0=1;MQRankSum=-4.320;QD=18.59;ReadPosRankSum=-0.742;VQSLOD=3.2859;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:33.01:0,33,302	0/0:7,0:7:18.01:0,18,165	0/0:19,0:14:31.97:0,32,265	0/0:21,0:14:1.80:0,2,152	0/0:18,0:18:48.01:0,48,436	0/0:20,0:20:50.97:0,51,449	0/0:10,0:10:19.27:0,19,84	0/0:31,0:30:71.75:0,72,634	0/0:15,0:15:41.99:0,42,377	0/0:12,0:12:30.02:0,30,274	0/0:21,0:21:46.54:0,47,411	0/0:17,0:17:41.99:0,42,378	0/0:18,0:18:53.99:0,54,483	0/0:21,0:21:53.99:0,54,485	0/0:22,0:22:50.81:0,51,435	0/0:13,0:12:33:0,33,297	0/0:27,0:27:71.98:0,72,647	0/0:18,0:18:44.98:0,45,407	0/0:18,0:18:42:0,42,384	0/0:24,0:24:65.86:0,66,577	0/0:16,0:16:48.01:0,48,434	0/0:12,0:12:33.01:0,33,301	0/0:17,0:18:44.05:0,44,390	0/0:15,0:15:42.02:0,42,384	0/0:13,0:13:24:0,24,219	1/1:8,11:19:39.10:439,39,0	0/0:29,0:29:68.99:0,69,620	1/1:2,3:5:11.99:124,12,0
chr10	84085586	.	G	GT	8237.87	PASS	AB=0.714;AC=29;AF=0.518;AN=56;BaseQRankSum=-6.017;DP=512;FS=10.317;HRun=5;HaplotypeScore=73.2198;InbreedingCoeff=0.9071;MQ=55.11;MQ0=3;MQRankSum=-2.762;QD=30.51;ReadPosRankSum=-0.315;VQSLOD=4.7563;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,12:17:41.81:505,42,0	1/1:0,10:10:27.08:343,27,0	0/0:13,0:8:9.02:0,9,96	0/0:14,0:7:15.03:0,15,156	0/0:25,0:24:66.17:0,66,709	0/0:22,0:22:60.13:0,60,636	1/1:3,11:14:39.12:501,39,0	1/1:10,27:34:65.09:862,65,0	0/0:17,0:18:43.35:0,43,454	1/1:1,16:17:48.14:615,48,0	1/1:2,14:16:39.13:509,39,0	0/0:19,0:19:53.93:0,54,561	0/0:19,0:19:48.12:0,48,515	0/0:15,0:14:36.09:0,36,385	0/0:19,0:20:38.84:0,39,395	1/1:0,13:12:33.11:434,33,0	1/1:0,30:30:78.25:1022,78,0	0/0:26,0:27:72.02:0,72,681	1/1:11,12:23:39.58:500,40,0	1/1:3,20:23:60.19:776,60,0	1/1:4,8:12:7.48:295,7,0	0/0:18,0:18:54.11:0,54,569	0/0:13,0:13:29.86:0,30,303	0/0:18,0:18:51.13:0,51,547	1/1:0,11:11:27.09:355,27,0	1/1:2,13:15:45.15:591,45,0	1/1:4,23:27:63.20:825,63,0	0/1:3,2:5:44.72:103,0,45
chr10	84085592	.	GT	G	1190.94	PASS	AB=0.917;AC=5;AF=0.089;AN=56;BaseQRankSum=5.682;DP=497;FS=0.000;HRun=5;HaplotypeScore=97.1144;InbreedingCoeff=0.7563;MQ=56.06;MQ0=4;MQRankSum=-1.021;QD=20.19;ReadPosRankSum=0.785;VQSLOD=2.6453;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:18:39.09:0,39,416	0/0:10,0:10:25.88:0,26,292	0/0:11,0:7:9.88:0,10,147	0/1:10,1:6:16.68:17,0,149	0/0:24,0:23:66.22:0,66,902	0/0:20,0:20:57.19:0,57,779	0/0:13,0:13:36.09:0,36,414	0/0:32,0:29:60.26:0,60,676	0/0:16,1:17:40.71:0,41,603	0/0:16,0:16:45.13:0,45,560	0/0:15,0:15:43.64:0,44,520	0/0:20,0:20:53.39:0,53,704	0/0:18,0:18:51.16:0,51,679	0/0:14,0:13:36.11:0,36,476	1/1:4,16:20:47.74:535,48,0	0/0:14,0:13:36.12:0,36,465	0/0:31,0:31:75.65:0,76,941	1/1:7,21:27:62.05:768,62,0	0/0:22,0:22:34.05:0,34,422	0/0:21,0:21:54.09:0,54,609	0/0:12,0:12:32.84:0,33,366	0/0:20,0:20:60.20:0,60,819	0/0:13,0:13:36.12:0,36,486	0/0:18,0:18:48.16:0,48,654	0/0:14,0:14:36.10:0,36,451	0/0:16,0:16:42.02:0,42,467	0/0:24,0:24:66.64:0,67,785	0/0:5,0:5:11.97:0,12,125
chr10	84085593	.	TTTTTGTTTTTG	T	615.10	PASS	AB=0.967;AC=8;AF=0.143;AN=56;BaseQRankSum=1.909;DP=495;FS=4.643;HRun=0;HaplotypeScore=191.2849;InbreedingCoeff=-0.1704;MQ=55.96;MQ0=4;MQRankSum=-2.569;QD=3.84;ReadPosRankSum=-6.361;VQSLOD=0.5076;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:97.45:97,0,700	0/0:9,0:9:15.25:0,15,401	0/0:11,0:7:13.34:0,13,235	0/0:11,0:6:14.97:0,15,336	0/0:24,0:23:66.21:0,66,2744	0/0:20,0:20:57.18:0,57,2624	0/1:13,0:13:99:123,0,505	0/1:32,0:29:99:122,0,555	0/0:17,0:17:43:0,43,1499	0/0:16,0:16:42.40:0,42,1256	0/0:15,0:15:42.09:0,42,1455	0/0:21,0:21:57.18:0,57,2178	0/0:18,0:18:48.12:0,48,1799	0/0:13,0:12:36.08:0,36,1409	0/0:20,0:20:22.68:0,23,1136	0/0:13,0:12:36.10:0,36,1196	0/0:31,0:31:74.70:0,75,3141	0/0:27,0:26:26.07:0,26,1535	0/1:14,8:22:99:175,0,529	0/1:21,0:21:28.51:29,0,1214	0/1:12,0:12:69.68:70,0,454	0/0:20,0:20:60.18:0,60,2281	0/0:12,0:12:36.07:0,36,1204	0/0:18,0:18:48.07:0,48,1926	0/0:14,0:14:36.08:0,36,1318	0/1:17,0:17:40.77:41,0,1077	0/1:24,0:24:94.55:95,0,1533	0/0:5,0:5:13.86:0,14,395
chr10	84085600	.	TTTTG	T	695.68	PASS	AB=0.945;AC=8;AF=0.143;AN=56;BaseQRankSum=2.274;DP=480;FS=0.523;HRun=0;HaplotypeScore=120.6484;InbreedingCoeff=-0.1743;MQ=60.55;MQ0=4;MQRankSum=-2.554;QD=4.29;ReadPosRankSum=-4.934;VQSLOD=0.6918;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,6:16:99:227,0,129	0/0:11,0:11:27.05:0,27,350	0/0:12,0:7:15.78:0,16,219	0/0:13,0:9:23.54:0,24,296	0/0:23,0:22:63.15:0,63,1173	0/0:22,0:22:60.18:0,60,1285	0/1:17,0:17:75.07:75,0,286	0/1:26,1:24:62.41:62,0,299	0/0:15,0:15:39.08:0,39,607	0/0:18,0:18:51.11:0,51,864	0/0:16,0:16:47.74:0,48,692	0/0:23,0:23:63.17:0,63,1148	0/0:17,0:17:46.93:0,47,784	0/0:12,0:11:33.08:0,33,634	0/1:19,1:20:99:257,0,148	0/0:14,0:13:39.11:0,39,758	0/0:28,0:28:72.24:0,72,1545	0/1:25,1:25:99:125,0,120	0/1:17,0:17:35.96:36,0,275	0/0:15,0:15:32.63:0,33,500	0/0:12,0:12:1.11:0,1,153	0/0:21,0:21:60.14:0,60,1078	0/0:14,0:14:42.09:0,42,657	0/0:16,0:16:48.11:0,48,894	0/0:13,0:13:39.09:0,39,677	0/1:17,0:17:4.37:4,0,457	0/1:21,1:22:40.70:41,0,561	0/0:3,0:3:9.03:0,9,157
chr10	84085604	.	G	GT	2627.93	PASS	AB=0.806;AC=21;AF=0.375;AN=56;BaseQRankSum=8.123;DP=477;FS=1.354;HRun=10;HaplotypeScore=88.7433;InbreedingCoeff=0.7895;MQ=63.12;MQ0=3;MQRankSum=-6.050;QD=12.63;ReadPosRankSum=-0.950;VQSLOD=3.4619;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:16:28.52:147,29,0	0/0:9,0:9:23.97:0,24,197	0/0:13,0:8:17.97:0,18,147	0/0:14,0:11:12.71:0,13,163	0/1:20,2:21:16.03:16,0,297	0/0:19,2:21:24.95:0,25,411	1/1:3,15:19:41.94:430,42,0	1/1:15,8:21:30.34:289,30,0	0/0:15,0:16:25.94:0,26,199	0/0:18,0:18:47.87:0,48,384	0/0:15,0:17:28.95:0,29,224	0/0:24,0:24:53.86:0,54,440	0/0:18,0:18:35.93:0,36,295	0/0:11,0:10:17.93:0,18,148	1/1:12,0:21:49.81:273,50,0	0/0:15,0:14:26.92:0,27,222	0/0:27,1:28:30.95:0,31,461	1/1:9,0:26:62.91:318,63,0	1/1:12,4:16:32.94:329,33,0	0/1:8,6:15:0.75:180,0,1	0/1:7,2:9:12.62:77,0,13	0/0:21,0:21:44.92:0,45,369	0/0:16,0:16:35.06:0,35,290	0/0:13,1:15:9.01:0,9,269	0/0:13,0:13:29.95:0,30,246	1/1:5,10:16:32.92:333,33,0	1/1:11,10:21:35.90:353,36,0	1/1:0,3:3:9.02:96,9,0
chr10	84086408	.	C	CT	528.28	PASS	AB=0.800;AC=3;AF=0.054;AN=56;BaseQRankSum=-0.069;DP=652;FS=0.000;HRun=11;HaplotypeScore=72.8501;InbreedingCoeff=0.5164;MQ=64.25;MQ0=6;MQRankSum=0.029;QD=11.24;ReadPosRankSum=-1.328;VQSLOD=2.9235;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,1:45:74.14:0,74,759	0/0:19,0:18:8.61:0,9,248	0/0:22,0:10:12.91:0,13,67	0/0:15,0:12:21.49:0,21,161	0/0:30,0:30:80.67:0,81,625	0/0:17,0:18:30.75:0,31,255	0/0:16,1:16:5.40:0,5,222	0/0:35,1:37:40.29:0,40,467	0/0:13,0:13:32.75:0,33,247	0/0:23,0:24:52.81:0,53,400	0/0:22,0:22:41.77:0,42,325	0/0:23,0:23:56.16:0,56,420	0/0:19,0:19:44.79:0,45,348	0/0:20,4:24:17.34:0,17,317	0/0:24,1:24:22.49:0,22,363	0/0:22,0:22:50.77:0,51,394	0/0:24,0:23:43.45:0,43,384	0/0:14,0:14:32.25:0,32,240	0/0:27,2:28:6.44:0,6,392	0/0:23,1:24:20.10:0,20,400	0/1:11,4:16:25.96:26,0,180	0/0:15,0:14:15.47:0,15,195	0/0:30,0:30:74.62:0,75,571	0/0:28,1:29:38.29:0,38,480	1/1:15,15:31:28.87:608,29,0	0/0:25,1:27:61:0,61,452	0/0:21,0:21:41.82:0,42,322	0/0:15,0:15:41.79:0,42,320
chr10	84088697	.	CAGTG	C	5609.45	PASS	AB=0.960;AC=29;AF=0.518;AN=56;BaseQRankSum=9.878;DP=672;FS=5.321;HRun=0;HaplotypeScore=111.5054;InbreedingCoeff=0.8876;MQ=60.99;MQ0=2;MQRankSum=0.885;QD=16.90;ReadPosRankSum=1.059;VQSLOD=4.4425;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:57:66.19:0,66,1096	1/1:3,6:9:18.06:282,18,0	0/0:12,0:9:6.02:0,6,130	0/0:15,0:12:12.51:0,13,246	0/0:16,0:16:30.09:0,30,653	0/0:17,0:17:35.97:0,36,711	1/1:15,9:24:14.29:234,14,0	1/1:17,5:22:15.04:213,15,0	0/0:23,0:23:42.14:0,42,953	1/1:9,6:15:15.05:235,15,0	1/1:8,14:22:30.10:470,30,0	0/0:37,0:37:54.19:0,54,1271	0/0:32,0:32:54.19:0,54,1248	0/0:27,0:27:48.16:0,48,1093	0/0:33,0:33:69.24:0,69,1628	1/1:8,14:22:30.10:470,30,0	1/1:16,28:45:69.23:1063,69,0	0/1:23,1:24:7.94:8,0,764	1/1:16,4:19:12.04:188,12,0	1/1:10,6:16:12.04:188,12,0	1/1:18,22:40:48.16:753,48,0	0/0:20,0:20:30.10:0,30,704	0/0:8,0:8:18.06:0,18,416	0/0:42,1:43:37.23:0,37,1817	1/1:8,9:16:21.07:329,21,0	1/1:9,11:20:33.11:517,33,0	1/1:8,15:23:36.12:564,36,0	1/1:11,2:13:6.02:94,6,0
chr10	84089587	.	CA	C	2543.76	PASS	AB=0.519;AC=9;AF=0.161;AN=56;BaseQRankSum=6.294;DP=489;FS=3.667;HRun=1;HaplotypeScore=48.1424;InbreedingCoeff=0.8231;MQ=55.71;MQ0=8;MQRankSum=-0.103;QD=33.04;ReadPosRankSum=0.469;VQSLOD=3.2023;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:41:99:0,111,1719	1/1:0,3:3:6.02:83,6,0	0/0:9,0:8:21.07:0,21,319	0/0:7,0:3:6.49:0,6,97	0/0:23,0:22:63.21:0,63,1006	0/0:11,0:11:30.10:0,30,480	0/0:25,0:23:69.24:0,69,1100	0/0:21,0:19:54.14:0,54,835	0/0:14,0:14:42.14:0,42,671	1/1:1,14:13:39.13:544,39,0	1/1:0,10:10:30.10:419,30,0	0/0:18,0:18:54.18:0,54,861	0/0:14,0:13:39.13:0,39,623	0/0:18,0:18:54.18:0,54,861	0/0:16,0:16:39.13:0,39,624	0/1:1,13:14:12:425,0,12	1/1:2,33:35:48.41:1232,48,0	0/0:16,0:16:42.14:0,42,669	0/0:14,0:14:39.13:0,39,623	0/0:14,0:13:39.13:0,39,623	0/0:20,0:19:50.53:0,51,785	0/0:15,0:15:45.15:0,45,718	0/0:17,0:17:42.14:0,42,671	0/0:17,0:17:51.17:0,51,815	0/0:17,0:17:51.17:0,51,814	0/0:20,1:21:21.52:0,22,915	0/0:33,0:32:90.29:0,90,1415	0/0:9,0:9:27.09:0,27,431
chr10	84089651	.	G	GAA	2416.69	PASS	AB=0.889;AC=30;AF=0.536;AN=56;BaseQRankSum=0.563;DP=514;FS=1.001;HRun=15;HaplotypeScore=68.1379;InbreedingCoeff=0.3905;MQ=59.16;MQ0=25;MQRankSum=-0.912;QD=6.94;ReadPosRankSum=-1.358;VQSLOD=-0.0160;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:37,4:47:38.49:272,0,38	1/1:0,3:3:2.99:38,3,0	0/1:35,0:8:12.56:13,0,39	0/1:27,0:11:15.42:15,0,37	0/0:29,0:28:38.62:0,39,360	0/0:20,0:20:34.95:0,35,270	0/1:13,5:19:4.97:126,0,5	1/1:27,1:18:1.07:167,1,0	0/0:11,0:11:11.48:0,11,78	0/1:12,1:13:3.63:126,0,4	1/1:4,2:7:14.36:132,14,0	0/0:16,0:19:18.43:0,18,179	0/0:15,0:13:9.16:0,9,99	0/0:20,0:20:32.87:0,33,270	0/1:7,7:15:10.90:73,0,11	1/1:10,1:13:23.20:199,23,0	1/1:23,5:34:60.01:526,60,0	1/1:14,0:14:20.93:192,21,0	1/1:10,13:18:8.06:239,8,0	1/1:3,4:5:8.86:90,9,0	1/1:8,6:12:6.90:75,7,0	0/0:10,0:8:18.48:0,18,132	0/0:17,0:15:7.72:0,8,101	0/0:20,0:21:24.94:0,25,258	1/1:8,2:18:22.15:196,22,0	0/1:11,0:12:6.92:25,0,7	0/1:7,0:6:4.36:4,0,17	1/1:6,0:5:11.97:99,12,0
chr10	84090511	.	TAC	T	1075.72	PASS	AB=0.781;AC=15;AF=0.395;AN=38;BaseQRankSum=6.196;DP=1599;FS=0.000;HRun=0;HaplotypeScore=86.8945;InbreedingCoeff=0.1778;MQ=17.02;MQ0=831;MQRankSum=-1.324;QD=1.38;ReadPosRankSum=0.807;VQSLOD=1.5207;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:6,15:5:4.87:17,5,0	./.	./.	./.	./.	1/1:31,17:14:2.86:39,3,0	0/0:66,5:42:99:0,108,1767	0/1:37,20:25:0.04:1,0,0	0/1:63,24:25:36.54:457,0,37	./.	0/0:39,32:22:0.79:0,1,1	1/1:39,18:26:3.01:39,3,0	0/0:32,21:18:3.01:0,3,43	0/1:94,29:54:0:0,0,0	0/1:52,40:39:23.92:24,0,188	0/0:22,5:4:5.99:0,6,72	0/1:30,11:15:17.60:18,0,320	0/0:27,2:10:30.09:0,30,486	./.	0/1:102,19:36:0:0,0,0	0/0:34,22:18:1.82:0,2,5	0/0:22,17:18:2.68:0,3,12	0/0:16,10:9:0:0,0,0	./.	0/1:49,23:21:99:245,0,174	1/1:32,18:24:27.01:350,27,0	./.
chr10	84090519	.	CACCATACACACA	C	1336.70	PASS	AB=0.952;AC=12;AF=0.273;AN=44;BaseQRankSum=4.680;DP=1791;FS=0.000;HRun=0;HaplotypeScore=120.7427;InbreedingCoeff=0.0826;MQ=16.90;MQ0=946;MQRankSum=-1.501;QD=2.71;ReadPosRankSum=0.760;VQSLOD=2.1985;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:58,1:15:0.23:0,0,0	1/1:23,0:6:4.15:14,4,0	./.	./.	./.	./.	0/0:55,0:16:2.99:0,3,90	0/0:78,0:41:99:0,120,3899	1/1:62,3:26:0.30:1,0,0	0/1:87,7:25:99:1004,0,892	0/0:39,0:11:1.25:0,1,3	0/0:69,8:23:2.57:0,3,38	0/0:63,2:28:2.59:0,3,97	0/0:55,6:20:3.01:0,3,188	0/0:150,9:68:2.98:0,3,42	0/0:97,8:44:17.87:0,18,749	0/0:33,0:4:6:0,6,139	0/1:46,1:16:4.12:4,0,1584	0/0:36,0:13:39.12:0,39,1960	./.	0/0:146,0:45:2.42:0,2,79	1/1:61,2:19:0.63:2,1,0	0/0:40,0:15:2.88:0,3,15	0/0:26,1:10:0:0,0,0	./.	0/1:73,4:19:99:244,0,1317	0/1:57,0:24:99:168,0,428	0/0:36,0:2:6.02:0,6,178
chr10	84090521	.	CCA	C	487.20	PASS	AB=0.988;AC=14;AF=0.333;AN=42;BaseQRankSum=7.030;DP=1828;FS=0.000;HRun=0;HaplotypeScore=100.8020;InbreedingCoeff=0.2257;MQ=16.92;MQ0=969;MQRankSum=-3.270;QD=0.74;ReadPosRankSum=3.409;VQSLOD=1.3219;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:61,0:15:0:0,0,0	1/1:23,2:6:4.87:17,5,0	./.	./.	./.	./.	1/1:58,0:18:2.73:21,3,0	0/0:77,0:38:99:0,111,2019	0/1:66,0:27:0.04:1,0,0	0/1:99,4:25:46.98:230,0,47	./.	0/0:81,0:23:3.73:0,4,19	1/1:68,0:30:2.90:21,3,0	0/0:63,0:21:3.01:0,3,61	0/0:165,0:70:2.58:0,3,18	0/1:108,0:47:3.12:3,0,202	0/1:33,0:4:7.10:7,0,55	0/0:47,0:16:15.81:0,16,575	0/0:35,0:13:39.09:0,39,707	./.	0/0:149,0:46:2.75:0,3,36	0/0:63,0:19:1.82:0,2,5	0/0:41,0:15:2.68:0,3,12	0/0:26,0:10:0:0,0,0	./.	0/1:77,3:19:99:136,0,275	1/1:59,0:26:9.74:169,10,0	0/0:35,0:3:9.03:0,9,133
chr10	84090925	.	TAC	T	1393.57	PASS	AB=0.837;AC=8;AF=0.143;AN=56;BaseQRankSum=10.841;DP=1519;FS=10.752;HRun=0;HaplotypeScore=224.6805;InbreedingCoeff=-0.1473;MQ=45.22;MQ0=46;MQRankSum=-12.171;QD=3.02;ReadPosRankSum=-1.550;VQSLOD=1.3735;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:57,7:60:42.26:0,42,1872	0/1:14,3:17:3.28:3,0,530	0/1:83,23:14:43.48:43,0,270	0/0:84,18:13:27.24:0,27,329	0/0:35,4:37:84.26:0,84,1440	0/0:37,3:39:63.22:0,63,1071	0/0:33,8:39:65.68:0,66,1125	0/1:55,25:71:99:565,0,1922	0/0:77,7:80:99:0,113,2161	0/1:63,16:71:99:378,0,2539	0/0:23,5:27:33.11:0,33,554	0/0:64,6:69:55.74:0,56,1981	0/1:43,11:51:99:141,0,994	0/0:48,8:56:51.16:0,51,1383	0/0:79,13:89:50.62:0,51,1437	0/0:58,9:64:44.59:0,45,1270	0/1:25,3:25:0.07:0,0,857	0/1:23,5:26:83.39:83,0,926	0/0:27,2:23:29.86:0,30,1062	0/0:28,1:27:26.82:0,27,1029	0/0:95,5:94:99:0,211,3577	0/0:27,8:29:48.11:0,48,823	0/0:31,7:37:75.21:0,75,1251	0/0:39,5:44:54.01:0,54,1484	0/0:35,0:31:63.21:0,63,1065	0/1:55,12:62:99:304,0,2063	0/0:25,2:24:55.43:0,55,907	0/0:30,2:31:90.31:0,90,1542
chr10	84092583	.	GGA	G	13893.75	PASS	AB=0.874;AC=39;AF=0.696;AN=56;BaseQRankSum=-3.003;DP=756;FS=13.385;HRun=0;HaplotypeScore=154.8079;InbreedingCoeff=-0.0648;MQ=57.03;MQ0=14;MQRankSum=-0.678;QD=19.06;ReadPosRankSum=-2.226;VQSLOD=4.1396;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,6:32:89.90:795,90,0	1/1:4,5:10:9.08:317,9,0	0/1:21,0:4:4.13:4,0,11	0/1:27,0:4:15.13:15,0,25	0/1:18,2:20:99:100,0,199	0/1:18,6:24:99:158,0,213	1/1:25,15:40:99:1287,105,0	1/1:26,10:38:99:1263,114,0	0/1:27,4:31:99:165,0,336	1/1:11,10:21:54.66:687,55,0	1/1:4,7:12:14.72:390,15,0	0/1:32,5:38:99:255,0,379	0/1:20,3:23:99:116,0,229	0/1:23,7:30:99:302,0,255	0/1:39,10:49:99:429,0,448	1/1:7,20:29:87.21:1239,87,0	1/1:11,18:32:93.03:1097,93,0	0/0:12,0:11:10.31:0,10,172	1/1:13,1:14:23.63:318,24,0	1/1:5,14:19:51.08:724,51,0	1/1:22,34:61:99:2192,168,0	0/1:21,5:26:99:225,0,205	0/1:14,2:16:64.86:65,0,167	0/1:26,9:35:99:246,0,299	0/1:12,3:15:2.04:106,0,2	1/1:22,4:34:9.49:470,9,0	1/1:10,16:29:83.91:931,84,0	0/0:7,0:15:19.98:0,20,82
chr10	84093333	.	TG	T	7429.81	PASS	AC=54;AF=1.000;AN=54;DP=277;FS=0.000;HRun=3;HaplotypeScore=39.5759;InbreedingCoeff=-0.0296;MQ=31.74;MQ0=17;QD=28.36;VQSLOD=3.4847;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:27.08:334,27,0	1/1:0,5:5:12.04:149,12,0	1/1:14,0:1:3:25,3,0	./.	1/1:0,14:14:24.03:297,24,0	1/1:0,13:13:27.08:334,27,0	1/1:0,6:6:15.05:186,15,0	1/1:1,16:16:45.14:554,45,0	1/1:0,10:10:21.07:260,21,0	1/1:0,11:11:33.10:409,33,0	1/1:1,9:10:18.06:223,18,0	1/1:0,8:8:21.07:260,21,0	1/1:1,8:9:24.07:294,24,0	1/1:0,14:14:39.12:483,39,0	1/1:0,14:14:39.12:479,39,0	1/1:2,9:11:27.08:334,27,0	1/1:0,11:10:27.08:334,27,0	1/1:1,7:7:15.05:186,15,0	1/1:1,12:13:36.11:446,36,0	1/1:0,4:4:12.04:148,12,0	1/1:1,4:5:6.02:74,6,0	1/1:0,2:2:6.02:74,6,0	1/1:0,3:3:6.02:74,6,0	1/1:0,2:2:6.02:74,6,0	1/1:0,9:9:24.07:293,24,0	1/1:0,8:8:21.07:257,21,0	1/1:0,24:23:66.21:814,66,0	1/1:0,2:2:3.01:35,3,0
chr10	84093429	.	T	TA	5902.18	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=-8.380;DP=350;FS=3.229;HRun=9;HaplotypeScore=34.9078;InbreedingCoeff=0.8324;MQ=58.05;MQ0=4;MQRankSum=-0.974;QD=22.61;ReadPosRankSum=0.528;VQSLOD=5.0803;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:29:34.11:604,34,0	0/1:2,0:2:0:0,0,0	0/0:2,0:1:3:0,3,26	0/1:9,0:7:10.18:10,0,86	0/0:11,0:11:23.97:0,24,208	0/0:16,0:17:35.02:0,35,289	1/1:2,6:8:18.05:199,18,0	1/1:7,23:27:63.17:697,63,0	0/0:12,0:12:32.99:0,33,286	1/1:5,8:13:33.05:348,33,0	1/1:1,5:6:12.03:133,12,0	0/0:14,0:14:41.98:0,42,362	0/0:10,0:10:23.81:0,24,208	0/0:8,0:8:17.99:0,18,156	1/1:5,10:15:36.04:375,36,0	1/1:4,9:13:27.07:299,27,0	1/1:1,17:19:47.94:502,48,0	1/1:2,8:10:24.06:266,24,0	1/1:8,19:24:54.12:581,54,0	1/1:0,7:7:21.06:232,21,0	1/1:0,3:3:6.02:66,6,0	0/0:5,0:5:11.99:0,12,104	0/0:4,0:4:12:0,12,104	0/0:6,0:6:11.98:0,12,104	1/1:2,0:11:19.89:99,20,0	1/1:3,10:13:7.31:297,7,0	1/1:1,18:19:42.11:465,42,0	1/1:4,23:27:66.18:729,66,0
chr10	84094102	.	T	TA	1610.80	PASS	AB=0.923;AC=25;AF=0.446;AN=56;BaseQRankSum=-6.438;DP=516;FS=8.647;HRun=14;HaplotypeScore=61.6409;InbreedingCoeff=0.4175;MQ=73.47;MQ0=4;MQRankSum=1.001;QD=5.41;ReadPosRankSum=0.820;VQSLOD=1.7162;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:19:32.83:278,33,0	1/1:0,5:5:15:132,15,0	0/0:32,0:16:13.53:0,14,68	0/1:27,0:16:2.68:3,0,8	0/1:16,3:22:5.04:5,0,195	0/0:24,0:24:53.04:0,53,344	0/0:11,0:11:23.64:0,24,154	0/1:31,2:32:0.04:0,0,250	0/1:10,1:11:2.70:3,0,110	1/1:5,13:18:10.70:208,11,0	1/1:7,19:27:14.15:354,14,0	1/1:3,10:13:5.97:168,6,0	0/1:9,1:10:0.10:0,0,108	0/1:7,0:7:14.72:15,0,44	0/0:15,0:15:31.49:0,31,196	1/1:2,8:11:23.83:196,24,0	1/1:6,21:27:15.46:383,15,0	0/0:27,1:28:27.76:0,28,296	0/1:18,2:19:10.83:11,0,156	0/0:23,1:25:29.13:0,29,305	0/1:3,2:6:0.85:21,0,1	0/1:5,0:5:0:0,0,0	0/1:9,1:12:7.50:7,0,70	0/0:14,1:16:11.07:0,11,191	0/0:21,0:24:18.82:0,19,274	0/1:22,2:25:3.47:3,0,225	0/0:28,0:29:14.31:0,14,192	0/0:12,0:13:23.58:0,24,154
chr10	84095050	.	GCGCACA	G	396.22	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=9.009;DP=448;FS=5.951;HRun=0;HaplotypeScore=99.1197;InbreedingCoeff=-0.0935;MQ=57.17;MQ0=8;MQRankSum=-7.632;QD=2.18;ReadPosRankSum=-0.797;VQSLOD=1.4561;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:5.14:0,5,278	0/1:7,0:7:14.34:14,0,66	0/1:10,0:4:1.77:2,0,29	0/0:6,0:3:1.89:0,2,20	0/0:10,0:10:26.83:0,27,335	0/0:23,0:23:32.97:0,33,626	0/1:22,0:22:49.11:49,0,245	0/0:17,0:17:41.13:0,41,306	0/0:14,0:14:29.81:0,30,587	0/0:15,0:15:6.05:0,6,193	0/0:8,0:8:14.97:0,15,95	0/0:10,0:10:26.82:0,27,297	0/0:12,0:12:29.34:0,29,321	0/0:16,0:16:31.13:0,31,524	0/1:14,0:14:51.98:52,0,113	0/1:19,0:18:68.58:69,0,150	0/1:25,0:25:47.59:48,0,218	0/0:13,0:12:23.95:0,24,148	0/1:22,0:21:1.73:2,0,253	0/0:18,0:17:2.15:0,2,168	0/0:25,0:24:32.59:0,33,297	0/0:9,0:9:20.82:0,21,339	0/0:12,0:12:35.73:0,36,442	0/0:37,0:37:92.34:0,92,1752	1/1:2,17:20:9.03:198,9,0	0/1:14,0:13:12.73:13,0,190	0/1:17,0:17:60.57:61,0,229	0/1:12,0:12:32.62:33,0,96
chr10	84095052	.	GCACACACA	G	1823.40	PASS	AB=0.931;AC=26;AF=0.520;AN=50;BaseQRankSum=5.926;DP=462;FS=3.019;HRun=0;HaplotypeScore=111.0838;InbreedingCoeff=0.5896;MQ=56.64;MQ0=8;MQRankSum=-5.412;QD=7.47;ReadPosRankSum=-0.300;VQSLOD=2.2886;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,1:22:58.33:72,0,58	1/1:4,3:7:2.64:74,3,0	./.	./.	0/0:11,0:11:6.02:0,6,212	0/0:14,0:25:15.05:0,15,553	1/1:18,0:22:9.03:154,9,0	./.	0/0:11,0:15:18.06:0,18,655	0/1:15,0:16:44.15:46,0,44	1/1:9,0:9:6.01:75,6,0	0/0:11,0:11:15.05:0,15,419	0/0:10,0:11:6.91:0,7,188	0/0:16,0:16:16.61:0,17,523	1/1:9,6:16:8.78:204,9,0	1/1:13,2:20:14.79:272,15,0	1/1:18,5:24:10.02:276,10,0	0/0:10,0:11:0.89:0,1,2	1/1:19,0:23:5.71:111,6,0	1/1:11,0:15:3.01:56,3,0	0/0:25,0:24:3.01:0,3,117	0/0:9,0:9:12.04:0,12,359	0/0:12,0:12:12.04:0,12,346	0/0:37,0:38:60.19:0,60,1841	1/1:20,0:20:8.86:92,9,0	1/1:10,4:14:15.46:201,15,0	1/1:12,0:17:12.04:223,12,0	1/1:8,6:14:5.28:147,5,0
chr10	84095148	.	CAG	C	701.37	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.533;DP=516;FS=0.882;HRun=0;HaplotypeScore=68.8670;InbreedingCoeff=0.9306;MQ=95.33;MQ0=0;MQRankSum=-2.648;QD=33.40;ReadPosRankSum=-0.558;VQSLOD=5.2190;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.25:0,72,1330	0/0:2,0:2:6.02:0,6,105	0/0:21,0:21:60.21:0,60,1102	0/0:29,0:29:78.05:0,78,1221	0/0:16,0:16:48.12:0,48,803	0/0:13,0:13:39.12:0,39,698	0/0:21,0:21:60.21:0,60,1117	0/0:29,0:29:81.27:0,81,1489	0/0:10,0:10:30.10:0,30,561	0/0:11,0:11:33.11:0,33,618	0/0:21,0:21:63.20:0,63,1140	0/0:19,0:19:57.15:0,57,1000	0/0:10,0:10:30.10:0,30,547	0/0:9,0:9:27.09:0,27,505	0/0:15,0:15:45.14:0,45,801	0/0:23,0:23:69.24:0,69,1291	0/0:49,0:49:99:0,141,2500	0/0:25,0:25:69.24:0,69,1292	0/0:16,0:16:42.10:0,42,742	0/0:17,0:17:39.13:0,39,723	0/0:21,0:21:51.17:0,51,953	0/0:13,0:13:39.13:0,39,730	0/0:12,0:12:36.12:0,36,672	0/0:32,0:32:93.30:0,93,1708	0/0:12,0:12:30.10:0,30,561	1/1:0,15:15:45.13:641,45,0	0/0:23,0:23:63.20:0,63,1135	1/1:0,6:6:11.94:176,12,0
chr10	84096583	.	A	AG	422.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.496;DP=652;FS=8.258;HRun=4;HaplotypeScore=65.5139;InbreedingCoeff=0.8925;MQ=70.20;MQ0=3;MQRankSum=-1.299;QD=30.18;ReadPosRankSum=-0.395;VQSLOD=3.4232;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:71.75:0,72,936	0/0:13,0:13:39.11:0,39,442	0/0:20,1:17:42.06:0,42,447	0/0:27,1:24:5.45:0,5,594	0/0:25,0:25:72.19:0,72,807	0/0:18,0:18:48.13:0,48,545	0/0:20,0:20:57.16:0,57,646	0/0:27,0:27:81.19:0,81,886	0/0:26,0:26:75.21:0,75,850	0/0:22,0:22:63.17:0,63,706	0/0:25,0:25:63.18:0,63,714	0/0:22,0:22:60.17:0,60,680	0/0:30,0:30:78.20:0,78,874	0/0:20,0:20:57.16:0,57,646	0/0:31,0:31:81.17:0,81,894	0/0:28,0:28:81.23:0,81,918	0/0:37,0:37:97.19:0,97,1177	0/0:23,0:23:49.03:0,49,664	0/0:32,0:31:81.20:0,81,900	0/0:30,0:30:87.23:0,87,976	0/0:21,0:21:54.14:0,54,603	0/0:20,0:20:60.16:0,60,671	0/0:22,0:22:54.14:0,54,603	0/0:17,0:17:51.14:0,51,577	1/1:2,12:14:39.12:517,39,0	0/0:24,0:24:72.15:0,72,794	0/0:13,0:13:36.10:0,36,406	0/0:8,0:8:21.06:0,21,238
chr10	84097118	.	C	CTT	643.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.602;DP=544;FS=3.645;HRun=7;HaplotypeScore=63.0630;InbreedingCoeff=0.9687;MQ=71.28;MQ0=0;MQRankSum=-0.659;QD=40.22;ReadPosRankSum=0.520;VQSLOD=3.3067;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.16:0,54,628	0/0:11,0:11:33.10:0,33,384	0/0:5,0:5:12.03:0,12,140	0/0:13,0:13:31.94:0,32,316	0/0:35,0:35:92.28:0,92,1042	0/0:30,0:30:84.23:0,84,968	0/0:13,0:13:39.12:0,39,454	0/0:36,0:36:93.24:0,93,1066	0/0:14,0:14:39.12:0,39,454	0/0:21,0:21:60.17:0,60,691	0/0:18,0:18:51.09:0,51,568	0/0:15,0:15:42.12:0,42,489	0/0:20,0:20:54.15:0,54,629	0/0:10,0:10:30.09:0,30,349	0/0:33,0:33:93.26:0,93,1073	0/0:26,0:26:69.19:0,69,795	0/0:25,0:25:69.20:0,69,804	0/0:20,0:20:57.17:0,57,664	0/0:14,0:14:33.09:0,33,385	0/0:25,0:25:72.21:0,72,838	0/0:18,0:18:51.14:0,51,594	0/0:15,0:15:39.11:0,39,454	0/0:18,0:18:51.14:0,51,584	0/0:15,0:15:39.04:0,39,428	1/1:0,16:16:45.15:738,45,0	0/0:23,0:23:69.21:0,69,804	0/0:19,0:19:54.15:0,54,629	0/0:18,0:18:54.16:0,54,629
chr10	84098971	.	G	GACAC	695.25	PASS	AB=0.768;AC=17;AF=0.340;AN=50;BaseQRankSum=-3.372;DP=476;FS=3.874;HRun=0;HaplotypeScore=103.9440;InbreedingCoeff=0.2548;MQ=68.73;MQ0=18;MQRankSum=1.082;QD=3.97;ReadPosRankSum=-2.468;VQSLOD=1.6340;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:2.04:0,2,6	0/0:10,0:10:3.48:0,3,46	./.	./.	1/1:15,0:15:2.99:42,3,0	1/1:12,7:19:3.01:70,3,0	0/0:18,0:20:8.38:0,8,64	1/1:20,0:19:3.40:18,3,0	0/1:10,0:14:15.87:16,0,34	0/0:11,0:11:4.35:0,4,30	0/0:4,0:10:9.01:0,9,84	0/1:13,6:25:34:199,0,34	0/1:5,4:11:34.88:131,0,35	1/1:9,5:16:6:140,6,0	0/0:12,0:15:9.01:0,9,84	0/0:10,0:16:15.01:0,15,139	0/0:13,0:20:9.01:0,9,84	0/1:6,0:5:0.04:0,0,0	./.	0/0:10,0:10:2.92:0,3,18	0/0:22,0:30:6.01:0,6,56	0/1:11,0:17:16.22:40,0,16	1/1:11,0:10:3:41,3,0	1/1:11,6:20:6.02:141,6,0	0/0:7,0:15:3.41:0,3,54	0/0:15,0:17:6.01:0,6,56	0/0:9,0:15:8.69:0,9,83	0/0:6,0:9:12.01:0,12,112
chr10	84099333	.	C	CA	711.92	PASS	AB=0.977;AC=8;AF=0.143;AN=56;BaseQRankSum=-0.297;DP=445;FS=3.001;HRun=13;HaplotypeScore=71.9608;InbreedingCoeff=0.6823;MQ=65.69;MQ0=2;MQRankSum=-0.534;QD=6.47;ReadPosRankSum=-1.892;VQSLOD=2.2162;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,2:23:33.17:219,33,0	0/0:7,0:7:11.86:0,12,82	0/1:20,0:14:3.48:3,0,30	0/1:20,0:14:7.87:8,0,19	0/0:13,0:12:17.74:0,18,123	0/0:13,0:14:11.61:0,12,150	0/0:10,0:11:25.81:0,26,169	0/0:26,0:26:56.39:0,56,390	0/0:12,0:12:20.20:0,20,132	0/0:16,0:16:8.98:0,9,182	0/0:12,0:12:23.73:0,24,164	0/0:12,0:13:28.76:0,29,191	0/0:13,0:13:14.72:0,15,101	0/0:18,0:19:31.66:0,32,208	1/1:10,19:28:24.41:355,24,0	0/0:14,0:17:35.54:0,36,216	0/0:21,0:22:41.40:0,41,282	1/1:3,14:17:15.31:273,15,0	0/0:19,2:22:9.64:0,10,204	0/0:8,0:8:11.73:0,12,82	0/0:9,0:9:20.80:0,21,144	0/0:10,0:10:17.81:0,18,123	0/0:3,0:4:10.96:0,11,67	0/0:14,0:14:32.68:0,33,226	0/0:4,0:14:19.22:0,19,65	0/0:24,1:26:22.64:0,23,301	0/0:23,0:23:48.61:0,49,343	0/0:10,0:10:11.74:0,12,77
chr10	84099884	.	ATGTG	A	1150.90	PASS	AB=0.784;AC=8;AF=0.148;AN=54;BaseQRankSum=4.669;DP=643;FS=10.755;HRun=0;HaplotypeScore=104.3762;InbreedingCoeff=0.4416;MQ=40.70;MQ0=101;MQRankSum=-4.009;QD=13.38;ReadPosRankSum=-0.613;VQSLOD=2.6005;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:18:18.06:0,18,454	1/1:2,0:2:3.01:52,3,0	0/0:30,0:5:3.01:0,3,54	0/0:25,0:12:21.07:0,21,366	0/0:11,0:8:15.05:0,15,351	0/0:13,0:11:15.05:0,15,334	0/0:46,0:41:54.68:0,55,1462	0/0:49,0:37:66.46:0,66,1143	0/0:17,0:15:27.02:0,27,622	0/1:25,6:17:20.51:391,0,21	1/1:5,4:7:3.01:52,3,0	0/0:23,0:18:30.10:0,30,756	0/0:14,0:11:24.08:0,24,571	0/0:16,0:12:1.58:0,2,381	0/0:14,0:8:14.92:0,15,303	1/1:12,5:12:18.53:305,19,0	0/1:17,10:22:37.05:483,0,37	0/0:12,0:6:17.85:0,18,290	0/0:21,0:10:15.03:0,15,266	0/0:11,0:6:6.02:0,6,152	0/0:112,0:89:99:0,120,2729	0/0:11,0:8:17.64:0,18,289	0/0:9,0:9:8.82:0,9,138	0/0:38,0:33:85.14:0,85,1947	0/0:15,0:9:11.79:0,12,301	0/0:29,0:12:27.06:0,27,487	0/0:8,0:5:8.89:0,9,226	./.
chr10	84099933	.	GTA	G	535.41	PASS	AB=0.971;AC=11;AF=0.204;AN=54;BaseQRankSum=5.946;DP=670;FS=0.538;HRun=0;HaplotypeScore=95.4994;InbreedingCoeff=-0.0308;MQ=36.19;MQ0=103;MQRankSum=-3.491;QD=1.66;ReadPosRankSum=-4.816;VQSLOD=0.1742;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,1:19:44.57:71,0,45	1/1:3,0:2:3:25,3,0	0/0:11,0:1:2.97:0,3,20	0/0:26,0:4:5.97:0,6,50	0/0:13,0:6:8.04:0,8,82	0/0:16,0:12:2.45:0,2,379	0/1:47,0:40:35.85:36,0,92	0/0:48,0:38:30.87:0,31,645	0/0:19,0:11:4.90:0,5,299	0/1:23,2:18:81.02:141,0,81	./.	0/0:24,0:22:44.02:0,44,632	0/0:10,0:8:17.93:0,18,211	0/0:17,0:12:9.88:0,10,287	0/0:15,0:14:13.26:0,13,556	1/1:17,3:15:1.79:167,2,0	0/1:25,3:23:19.73:153,0,20	0/0:19,0:11:5.40:0,5,313	0/0:18,0:12:8.01:0,8,215	0/0:13,0:8:7.33:0,7,103	0/1:126,0:88:42.98:43,0,1527	0/0:8,0:5:8.82:0,9,125	0/0:13,0:11:20.42:0,20,320	0/0:50,1:44:43.31:0,43,1290	0/0:14,0:7:1.52:0,2,12	0/1:34,0:19:29.68:30,0,122	0/1:11,0:5:1.27:1,0,19	0/0:7,0:6:5.96:0,6,50
chr10	84099935	.	ATGTGTG	A	323.68	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=2.421;DP=658;FS=1.063;HRun=0;HaplotypeScore=121.2471;InbreedingCoeff=0.4957;MQ=37.09;MQ0=90;MQRankSum=-4.813;QD=7.04;ReadPosRankSum=-0.517;VQSLOD=2.3480;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:21:20.03:0,20,138	0/0:3,0:2:2.98:0,3,22	0/0:12,0:2:6.02:0,6,102	0/0:24,0:3:3.01:0,3,42	0/0:13,0:7:12.03:0,12,218	0/0:12,0:12:24:0,24,708	1/1:30,16:39:37.74:417,38,0	0/0:46,0:37:59.81:0,60,1082	0/0:20,0:13:26.90:0,27,561	0/0:25,0:18:16.43:0,16,194	./.	0/0:26,0:24:42.13:0,42,1004	0/0:10,0:8:12.04:0,12,302	0/0:16,0:12:21.04:0,21,471	0/0:14,0:14:39.13:0,39,968	0/0:16,0:14:14.37:0,14,140	0/0:25,0:23:17.93:0,18,115	0/0:20,0:12:27.04:0,27,675	0/0:19,0:13:23.82:0,24,526	0/0:10,0:8:12.44:0,12,243	0/0:119,0:85:99:0,101,2914	0/0:7,0:4:6.02:0,6,195	0/0:13,0:11:18.04:0,18,500	0/0:49,0:43:83.98:0,84,2149	0/0:13,0:8:8.43:0,8,48	0/0:29,0:19:18.31:0,18,232	0/0:12,0:7:11.84:0,12,165	0/0:2,0:6:5.61:0,6,77
chr10	84099941	.	G	GTA	62.36	PASS	AB=0.968;AC=6;AF=0.111;AN=54;BaseQRankSum=6.444;DP=641;FS=0.000;HRun=0;HaplotypeScore=100.7637;InbreedingCoeff=0.0776;MQ=40.20;MQ0=75;MQRankSum=-5.076;QD=0.55;ReadPosRankSum=1.025;VQSLOD=1.2308;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:22:16.17:0,16,156	0/0:3,0:2:3:0,3,25	0/0:17,0:5:9.02:0,9,118	0/0:26,0:7:5.20:0,5,100	0/0:11,0:6:12.03:0,12,161	0/0:17,0:13:24:0,24,337	0/1:40,7:40:70.55:121,0,71	0/0:43,0:37:71.72:0,72,824	0/0:22,0:14:29.98:0,30,361	0/0:22,0:17:29.51:0,30,188	./.	0/0:25,0:24:48.05:0,48,603	0/0:9,0:7:15.03:0,15,206	0/0:14,0:12:26.89:0,27,337	0/0:15,0:14:18.75:0,19,465	0/1:17,0:14:19.60:20,0,42	0/0:26,0:23:9.28:0,9,163	0/0:21,0:14:20.20:0,20,412	0/0:15,0:10:29.67:0,30,337	0/0:10,0:7:11.81:0,12,156	0/0:109,0:79:99:0,105,1527	0/0:4,0:2:6.02:0,6,90	0/0:13,0:11:24.03:0,24,301	0/0:54,0:48:99:0,108,1332	0/0:16,0:9:8.90:0,9,66	0/1:31,0:20:14.07:14,0,156	0/1:12,0:7:6.89:7,0,122	1/1:6,0:6:3.26:10,3,0
chr10	84101038	.	TTGTGTGTGTGTGTG	T	3523.05	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=3.143;DP=461;FS=4.136;HRun=0;HaplotypeScore=169.2563;InbreedingCoeff=0.8033;MQ=67.39;MQ0=18;MQRankSum=-6.162;QD=27.31;ReadPosRankSum=0.302;VQSLOD=2.9610;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:33:51.16:0,51,2187	0/0:2,0:4:9.03:0,9,306	./.	0/0:26,0:10:0:0,0,0	0/0:15,0:15:36.11:0,36,1782	0/0:9,0:21:14.08:0,14,769	1/1:9,3:13:15.05:498,15,0	0/1:25,0:25:99:264,0,116	0/0:16,0:16:27.07:0,27,1242	0/0:13,0:13:33.11:0,33,1697	0/0:7,0:7:9.03:0,9,520	0/0:20,0:20:48.16:0,48,2676	0/0:20,0:20:45.15:0,45,2232	0/0:10,0:10:12.03:0,12,512	1/1:9,4:14:15.05:569,15,0	0/0:9,0:18:39.61:0,40,1382	0/0:10,0:17:15.05:0,15,475	1/1:8,5:13:9.03:273,9,0	1/1:13,3:16:14.84:464,15,0	1/1:5,7:12:21.07:824,21,0	1/1:23,1:21:5.86:139,6,0	0/0:11,0:18:15.05:0,15,534	0/0:11,0:11:15.05:0,15,830	0/0:20,0:21:39.01:0,39,1902	0/0:12,0:12:33.09:0,33,1657	0/0:16,0:16:24.08:0,24,1188	1/1:8,2:11:15.05:492,15,0	0/0:7,0:7:18.06:0,18,926
chr10	84101117	.	CAA	C	1655.56	PASS	AB=0.794;AC=31;AF=0.554;AN=56;BaseQRankSum=2.024;DP=393;FS=1.088;HRun=17;HaplotypeScore=70.9000;InbreedingCoeff=0.5092;MQ=55.96;MQ0=7;MQRankSum=2.049;QD=6.70;ReadPosRankSum=5.361;VQSLOD=-0.2121;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,10:22:2.95:123,0,3	1/1:3,4:8:11.63:83,12,0	0/0:14,0:11:1.25:0,1,3	0/0:15,0:10:0.89:0,1,2	0/0:14,1:20:11.43:0,11,288	0/0:19,0:20:39.30:0,39,353	1/1:7,4:13:5.58:74,6,0	1/1:17,7:23:19.57:174,20,0	0/0:10,0:11:11.66:0,12,215	1/1:6,6:12:17.30:120,17,0	1/1:5,8:12:17.64:142,18,0	0/0:15,0:14:27.01:0,27,284	0/0:10,0:10:14.30:0,14,157	0/0:14,0:15:32.98:0,33,356	1/1:4,11:16:30.75:227,31,0	1/1:8,5:14:23.50:166,24,0	0/1:8,0:9:32.63:33,0,33	1/1:1,4:5:2.28:42,2,0	0/1:10,3:16:48.37:62,0,48	0/1:10,1:10:19.55:20,0,21	1/1:3,2:5:5.93:47,6,0	0/0:13,0:13:23.87:0,24,227	0/1:19,1:20:13.49:13,0,208	0/0:12,0:11:17.39:0,17,160	1/1:15,0:15:23.93:101,24,0	1/1:6,7:13:23.62:183,24,0	1/1:8,9:17:7.68:163,8,0	1/1:3,4:9:5.52:74,6,0
chr10	84101125	.	AAAAAAAAAAG	A	735.54	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.173;DP=444;FS=0.000;HRun=0;HaplotypeScore=139.6435;InbreedingCoeff=0.9020;MQ=57.46;MQ0=9;MQRankSum=-4.713;QD=38.71;ReadPosRankSum=3.686;VQSLOD=3.1412;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:55.29:0,55,1298	0/0:7,0:7:21.07:0,21,671	0/0:21,0:13:29.92:0,30,456	0/0:11,0:5:11.82:0,12,111	0/0:17,0:17:49.98:0,50,1976	0/0:20,0:20:59.33:0,59,1519	0/0:20,0:19:44.72:0,45,1213	0/0:29,0:27:66.11:0,66,1264	0/0:13,0:13:39.09:0,39,1350	0/0:21,0:20:46.27:0,46,1600	0/0:18,0:17:48.06:0,48,1288	0/0:14,0:13:36.07:0,36,1288	0/0:12,0:12:36.11:0,36,983	0/0:14,0:14:39.13:0,39,1413	0/0:16,0:16:33.58:0,34,935	0/0:15,0:15:42.03:0,42,1122	0/0:16,0:14:36.07:0,36,1072	0/0:6,0:6:11.40:0,11,322	0/0:19,0:18:51.06:0,51,1375	0/0:11,0:10:26.61:0,27,431	0/0:5,0:5:15.04:0,15,441	0/0:12,0:11:30.10:0,30,1210	0/0:22,0:21:57.48:0,57,1805	0/0:12,0:10:24.08:0,24,970	1/1:1,18:19:33.01:830,33,0	0/0:18,0:18:51.10:0,51,1353	0/0:22,0:22:62.93:0,63,1759	0/0:9,0:9:15.05:0,15,508
chr10	84101544	.	CAGAGATCTGCT	C	4534.02	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.734;DP=395;FS=16.880;HRun=0;HaplotypeScore=136.0134;InbreedingCoeff=0.9612;MQ=81.32;MQ0=0;MQRankSum=-9.629;QD=87.19;ReadPosRankSum=-3.436;VQSLOD=3.2262;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:48.16:0,48,2654	0/0:12,0:12:36.12:0,36,2056	0/0:20,0:19:49.05:0,49,2381	0/0:28,0:24:66.05:0,66,2869	0/0:17,0:17:48.16:0,48,2842	0/0:22,0:22:66.21:0,66,3473	1/1:0,9:11:30.10:962,30,0	1/1:0,8:8:21.07:782,21,0	0/0:8,0:8:24.08:0,24,1362	0/0:9,0:9:27.09:0,27,1488	0/0:14,0:14:42.14:0,42,2393	0/0:8,0:8:18.06:0,18,1067	0/0:20,0:20:60.21:0,60,3336	0/0:20,0:20:60.21:0,60,3267	0/0:21,0:21:60.21:0,60,3322	0/0:8,0:8:24.08:0,24,1395	0/0:26,0:26:63.03:0,63,3144	0/0:16,0:15:45.15:0,45,2549	1/1:0,5:5:15.05:549,15,0	1/1:0,8:11:33.11:1038,33,0	1/1:0,6:6:6.49:225,6,0	0/0:17,0:17:51.18:0,51,2844	0/0:11,0:11:33.11:0,33,1839	0/0:14,0:14:36.12:0,36,1977	0/0:14,0:14:36.12:0,36,2028	0/0:10,0:10:27.09:0,27,1453	1/1:1,9:11:27.09:978,27,0	0/0:4,0:4:9.03:0,9,532
chr10	84101603	.	CT	C	1199.86	PASS	AB=0.741;AC=20;AF=0.385;AN=52;BaseQRankSum=0.300;DP=539;FS=4.654;HRun=11;HaplotypeScore=64.0739;InbreedingCoeff=0.7082;MQ=32.96;MQ0=144;MQRankSum=-2.640;QD=5.17;ReadPosRankSum=1.026;VQSLOD=1.3909;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:22:19.87:0,20,156	0/0:7,0:6:7.26:0,7,67	./.	./.	0/0:23,0:17:20.17:0,20,178	0/0:17,0:16:14.21:0,14,187	1/1:13,10:19:29.74:245,30,0	1/1:15,8:19:12.94:183,13,0	0/0:14,0:10:8.97:0,9,63	0/0:26,0:18:39.07:0,39,403	0/0:19,1:18:4.29:0,4,192	0/0:9,0:6:8.51:0,9,72	0/0:21,1:18:5.41:0,5,248	0/0:17,0:15:11.52:0,12,105	0/1:6,12:16:7.99:147,0,8	0/0:13,0:9:16.21:0,16,119	0/0:38,0:21:15.12:0,15,109	1/1:17,9:14:20.92:168,21,0	1/1:20,3:14:8.81:74,9,0	1/1:21,10:28:17.33:146,17,0	1/1:10,1:3:3:25,3,0	0/0:11,0:10:20.07:0,20,187	0/0:22,0:19:31.24:0,31,292	0/0:28,0:16:32.94:0,33,303	1/1:11,0:8:8.76:55,9,0	0/1:14,1:13:22.93:41,0,23	1/1:8,10:14:23.42:196,23,0	1/1:26,5:16:13.27:112,13,0
chr10	84103875	.	AGAATGAAT	A	6864.59	PASS	AB=0.596;AC=17;AF=0.315;AN=54;BaseQRankSum=5.515;DP=652;FS=20.602;HRun=0;HaplotypeScore=180.1231;InbreedingCoeff=0.8626;MQ=68.44;MQ0=3;MQRankSum=-11.982;QD=31.06;ReadPosRankSum=-3.730;VQSLOD=2.6920;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:34:53.91:0,54,488	0/0:2,0:7:15.87:0,16,147	0/0:21,0:16:6.02:0,6,228	0/0:27,0:22:15.05:0,15,420	0/0:27,0:27:69.24:0,69,2731	0/0:32,0:32:75.26:0,75,2795	1/1:7,12:19:18.06:422,18,0	1/1:12,18:30:53.86:732,54,0	0/0:20,0:20:51.18:0,51,2040	0/0:6,0:25:59.97:0,60,540	0/0:8,0:31:70.83:0,71,594	0/0:21,0:21:42.14:0,42,1721	0/0:21,0:21:51.16:0,51,1839	0/0:33,0:33:75.26:0,75,2893	1/1:8,21:29:54.19:1323,54,0	0/1:10,1:31:6.71:7,0,383	0/0:10,0:26:47.93:0,48,456	1/1:6,0:6:6.02:76,6,0	1/1:12,9:21:27.09:679,27,0	1/1:5,24:29:57.20:1271,57,0	0/0:8,0:8:0.89:0,1,2	0/0:19,0:19:45.15:0,45,1780	0/0:27,0:27:69.24:0,69,2827	0/0:29,0:29:39.13:0,39,1514	0/0:14,0:14:36.12:0,36,1492	1/1:6,23:29:63.19:1471,63,0	1/1:12,15:27:36.12:884,36,0	./.
chr10	84105393	.	AT	A	2363.98	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.312;DP=523;FS=3.097;HRun=9;HaplotypeScore=51.0074;InbreedingCoeff=0.9627;MQ=68.82;MQ0=0;MQRankSum=1.079;QD=20.38;ReadPosRankSum=0.639;VQSLOD=4.1145;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,1:20:29.68:0,30,577	0/0:11,0:11:33.10:0,33,381	0/0:7,0:8:4.77:0,5,71	0/0:10,0:10:18.05:0,18,208	0/0:26,0:26:45.19:0,45,769	0/0:23,0:23:63.19:0,63,726	0/0:18,1:19:23.66:0,24,506	1/1:3,22:25:66.02:599,66,0	0/0:14,0:14:39.12:0,39,450	0/0:18,0:18:48.14:0,48,547	0/0:22,1:23:20.68:0,21,492	0/0:21,0:21:57.16:0,57,649	0/0:17,0:17:51.14:0,51,579	0/0:16,0:16:42.10:0,42,467	0/0:21,0:21:57.17:0,57,658	0/0:22,0:22:30.16:0,30,596	0/0:27,1:28:47.58:0,48,761	0/0:8,0:8:21.06:0,21,242	1/1:4,10:14:30.01:274,30,0	1/1:1,21:22:53.95:484,54,0	1/1:2,21:23:51.03:467,51,0	0/0:18,0:18:54.15:0,54,615	0/0:18,0:18:48.13:0,48,545	0/0:7,0:7:18.04:0,18,198	0/0:15,1:16:20.65:0,21,472	0/0:25,0:26:75.06:0,75,845	1/1:4,28:32:78.04:714,78,0	0/0:16,0:16:43.94:0,44,490
chr10	84105996	.	C	CT	3574.73	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-10.341;DP=521;FS=7.124;HRun=9;HaplotypeScore=53.0906;InbreedingCoeff=0.9273;MQ=72.35;MQ0=0;MQRankSum=-0.952;QD=25.53;ReadPosRankSum=-2.301;VQSLOD=3.5068;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:89.96:0,90,777	0/0:7,0:7:21:0,21,182	0/0:9,0:9:4.77:0,5,78	0/0:9,0:9:8.03:0,8,58	0/0:27,0:27:74.97:0,75,651	0/0:21,0:21:53.98:0,54,469	1/1:2,13:15:13.05:372,13,0	1/1:3,17:20:51.12:555,51,0	0/0:24,0:24:65.97:0,66,573	0/0:26,0:26:68.95:0,69,594	0/0:16,1:17:11.81:0,12,331	0/0:20,0:20:50.98:0,51,443	0/0:16,0:16:20.32:0,20,317	0/0:16,0:16:44.99:0,45,390	1/1:2,19:22:24.91:486,25,0	0/0:16,0:16:41.96:0,42,361	0/0:33,0:32:71.13:0,71,624	1/1:0,9:9:27.07:299,27,0	1/1:1,13:15:41.95:445,42,0	1/1:1,10:11:27:273,27,0	1/1:3,22:25:40.13:671,40,0	0/0:18,0:18:53.97:0,54,465	0/0:22,0:22:59.97:0,60,521	0/0:19,0:19:53.99:0,54,469	0/0:18,0:18:53.99:0,54,469	0/0:28,0:29:74.01:0,74,628	1/1:3,17:23:47.63:474,48,0	0/0:1,0:1:3:0,3,26
chr10	84107045	.	AGT	A	1269.51	PASS	AB=0.828;AC=15;AF=0.288;AN=52;BaseQRankSum=1.517;DP=591;FS=0.000;HRun=0;HaplotypeScore=90.0289;InbreedingCoeff=0.7263;MQ=62.83;MQ0=6;MQRankSum=1.423;QD=6.90;ReadPosRankSum=0.840;VQSLOD=2.9771;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:31:0.39:0,0,0	0/0:6,0:6:5.60:0,6,36	./.	./.	0/0:26,0:27:4.15:0,4,447	0/0:12,0:12:18.04:0,18,250	1/1:10,10:20:23.86:247,24,0	1/1:22,7:29:23.85:246,24,0	0/0:21,0:21:33.09:0,33,474	0/0:13,0:23:33.19:0,33,312	0/0:9,0:14:3:0,3,26	0/0:24,1:26:5.51:0,6,455	0/0:16,0:16:12.97:0,13,161	0/0:22,0:22:30.07:0,30,430	0/0:26,0:27:9.67:0,10,47	0/0:15,0:34:12.26:0,12,139	0/0:18,0:25:9.44:0,9,73	0/0:12,0:16:6.01:0,6,61	1/1:13,3:16:9.02:100,9,0	1/1:10,9:20:26.91:280,27,0	1/1:10,11:20:15.04:166,15,0	0/0:15,0:15:21.07:0,21,316	0/1:19,5:24:0.17:0,0,420	0/0:22,0:22:48.14:0,48,677	0/0:12,0:17:6.01:0,6,70	0/0:21,0:34:47.88:0,48,369	1/1:8,15:22:36.10:400,36,0	0/0:4,0:12:6:0,6,52
chr10	84107317	.	ACAAGAGTAGATATTAAATGTATAG	A	1001.28	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.482;DP=642;FS=12.856;HRun=0;HaplotypeScore=374.4886;InbreedingCoeff=0.9593;MQ=86.39;MQ0=0;MQRankSum=-3.218;QD=47.68;ReadPosRankSum=0.222;VQSLOD=1.1016;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:54.16:0,54,4830	0/0:6,0:6:12.03:0,12,1020	0/0:28,0:28:36.12:0,36,1892	0/0:30,0:30:26.66:0,27,1435	0/0:19,0:19:51.15:0,51,3696	0/0:29,0:29:72.23:0,72,7383	0/0:22,0:22:42.14:0,42,4150	0/0:25,0:25:42.13:0,42,2668	0/0:26,0:26:54.17:0,54,4939	0/0:21,0:21:45.15:0,45,4025	0/0:16,0:16:33.09:0,33,2613	0/0:16,0:16:36.12:0,36,3688	0/0:25,0:25:48.15:0,48,4246	0/0:21,0:21:48.16:0,48,4780	0/0:28,0:28:63.22:0,63,6340	0/0:24,0:24:54.17:0,54,5075	0/0:24,0:24:54.16:0,54,5297	0/0:16,0:16:27.09:0,27,2432	0/0:16,0:16:33.10:0,33,2705	0/0:34,0:34:75.26:0,75,6515	0/0:28,0:28:66.23:0,66,6475	0/0:17,0:17:45.14:0,45,3587	0/0:21,0:21:42.10:0,42,2831	0/0:26,0:26:48.15:0,48,4251	1/1:6,15:21:18.06:1092,18,0	0/0:22,0:22:51.18:0,51,4374	0/0:35,0:34:90.26:0,90,7781	0/0:16,0:16:39.13:0,39,4103
chr10	84107927	.	TA	T	649.07	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.642;DP=684;FS=1.890;HRun=3;HaplotypeScore=64.8128;InbreedingCoeff=0.9984;MQ=78.84;MQ0=0;MQRankSum=-2.064;QD=32.45;ReadPosRankSum=0.881;VQSLOD=3.9737;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1595	0/0:15,0:15:42.14:0,42,605	0/0:19,0:19:53.75:0,54,716	0/0:16,0:17:39.39:0,39,517	0/0:38,0:38:99:0,105,1512	0/0:22,0:22:63.21:0,63,907	0/0:21,0:21:60.20:0,60,864	0/0:33,0:33:93.29:0,93,1277	0/0:24,0:24:66.22:0,66,948	0/0:31,0:31:93.31:0,93,1340	0/0:24,0:24:63.20:0,63,884	0/0:30,0:30:90.28:0,90,1260	0/0:33,0:33:96.32:0,96,1369	0/0:20,0:20:57.17:0,57,800	0/0:30,0:30:90.29:0,90,1280	0/0:39,0:39:99:0,114,1640	0/0:25,0:25:75.25:0,75,1080	0/0:11,0:11:33.11:0,33,475	0/0:11,0:11:33.10:0,33,458	0/0:32,0:32:90.30:0,90,1296	0/0:32,0:32:93.29:0,93,1304	0/0:22,0:22:66.22:0,66,950	0/0:23,0:23:63.20:0,63,890	0/0:20,0:20:60.20:0,60,864	1/1:0,20:20:60.19:744,60,0	0/0:22,0:22:66.20:0,66,916	0/0:23,0:23:69.23:0,69,994	0/0:9,0:9:27.09:0,27,389
chr10	84108964	.	CT	C	805.16	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.641;DP=509;FS=5.142;HRun=3;HaplotypeScore=45.2491;InbreedingCoeff=0.9391;MQ=68.55;MQ0=0;MQRankSum=0.255;QD=26.84;ReadPosRankSum=-0.493;VQSLOD=2.4776;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:48.39:900,48,0	0/0:9,0:9:27.09:0,27,389	0/0:6,0:6:17.09:0,17,218	0/0:7,0:7:15.05:0,15,216	0/0:22,0:22:66.22:0,66,951	0/0:12,0:12:36.12:0,36,518	0/0:5,0:5:12.04:0,12,171	0/0:37,0:37:99:0,99,1410	0/0:15,0:15:45.15:0,45,648	0/0:19,0:19:57.19:0,57,821	0/0:18,0:18:54.18:0,54,777	0/0:18,0:18:54.18:0,54,778	0/0:13,0:13:39.13:0,39,561	0/0:16,0:16:48.15:0,48,672	0/0:17,0:17:51.16:0,51,716	0/0:19,0:19:57.19:0,57,821	0/0:26,0:26:75.25:0,75,1080	0/0:16,0:16:45.15:0,45,648	0/0:9,0:9:27.09:0,27,389	0/0:23,0:23:69.23:0,69,993	0/0:11,0:11:33.11:0,33,475	0/0:7,0:7:21.07:0,21,302	0/0:17,0:17:51.13:0,51,711	0/0:18,0:18:48.12:0,48,667	0/0:44,0:44:99:0,129,1841	0/0:36,0:36:99:0,102,1451	0/0:30,0:30:90.30:0,90,1296	0/0:9,0:9:24.55:0,25,346
chr10	84109879	.	CT	C	951.42	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-1.505;DP=486;FS=19.650;HRun=11;HaplotypeScore=80.1445;InbreedingCoeff=0.7646;MQ=62.61;MQ0=12;MQRankSum=1.235;QD=7.80;ReadPosRankSum=3.102;VQSLOD=0.7411;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,7:23:23.98:260,24,0	1/1:3,6:9:6.27:96,6,0	0/0:34,0:10:13.53:0,14,95	0/0:29,1:12:0.14:0,0,49	0/0:20,0:20:29.12:0,29,264	0/1:10,0:10:12.61:13,0,74	0/0:12,0:10:11.89:0,12,107	0/0:30,1:30:16.15:0,16,414	0/0:14,0:14:28.27:0,28,264	1/1:10,11:20:31.57:239,32,0	1/1:5,11:16:32.35:239,32,0	0/0:16,0:15:32.58:0,33,299	0/0:8,0:8:11.98:0,12,110	0/0:12,0:12:23.95:0,24,212	0/0:16,0:16:32.80:0,33,281	1/1:14,1:15:5.88:49,6,0	1/1:9,19:27:7.98:230,8,0	0/0:15,0:13:19.05:0,19,148	0/0:25,0:22:41.05:0,41,444	0/0:18,0:18:41.46:0,41,379	0/0:13,0:13:12.45:0,12,109	0/0:5,0:5:12.03:0,12,126	0/0:11,0:11:14.39:0,14,125	0/0:15,0:15:23.52:0,24,199	0/0:17,0:18:29.76:0,30,174	0/0:15,0:15:31.50:0,32,233	0/0:23,0:24:37.29:0,37,336	0/0:7,0:6:12.92:0,13,96
chr10	84109891	.	C	CT	1037.06	PASS	AB=0.951;AC=30;AF=0.536;AN=56;BaseQRankSum=0.505;DP=485;FS=0.000;HRun=15;HaplotypeScore=68.6273;InbreedingCoeff=0.1959;MQ=54.28;MQ0=21;MQRankSum=-3.505;QD=3.01;ReadPosRankSum=-0.395;VQSLOD=-0.4937;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,1:27:5.25:5,0,125	0/1:7,0:8:5.33:5,0,46	0/0:40,0:8:8.52:0,9,35	0/1:32,0:11:9.12:9,0,13	0/0:19,0:18:17.81:0,18,92	0/1:10,6:16:5.76:6,0,69	0/1:10,1:9:16.55:26,0,17	1/1:17,16:31:40.11:293,40,0	0/0:15,0:15:5.52:0,6,127	0/1:15,0:15:28.58:29,0,56	0/1:17,0:18:5.09:5,0,54	0/1:15,0:14:6.06:6,0,54	0/0:5,0:5:3.98:0,4,32	0/1:8,1:9:13.76:14,0,45	1/1:16,0:16:5.80:135,6,0	0/0:12,0:12:8.60:0,9,48	0/0:26,0:26:17.16:0,17,139	1/1:14,1:13:4.21:81,4,0	1/1:24,3:23:18.63:175,19,0	1/1:13,4:18:2.08:94,2,0	1/1:1,8:10:11.83:89,12,0	0/0:5,0:5:5.86:0,6,36	0/1:11,0:12:10.01:10,0,42	0/0:16,0:15:5.58:0,6,122	1/1:13,0:15:9.13:38,9,0	1/1:15,0:15:6.33:22,6,0	1/1:18,2:18:19.13:144,19,0	1/1:10,0:8:6.01:27,6,0
chr10	84109998	.	CCCT	C	869.56	PASS	AB=0.982;AC=22;AF=0.393;AN=56;BaseQRankSum=2.479;DP=275;FS=29.596;HRun=0;HaplotypeScore=44.9962;InbreedingCoeff=0.0807;MQ=65.84;MQ0=26;MQRankSum=-0.078;QD=5.33;ReadPosRankSum=5.879;VQSLOD=0.4134;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:21:36.03:529,36,0	1/1:7,0:6:7.41:44,7,0	0/0:33,0:14:18.30:0,18,355	0/0:24,0:9:17.62:0,18,177	0/0:9,0:7:5.51:0,6,92	0/0:10,0:10:21:0,21,243	0/1:7,0:5:4.84:5,0,54	0/1:14,0:10:19.82:20,0,92	0/0:6,0:5:6.48:0,6,63	1/1:8,0:8:8.30:49,8,0	1/1:9,0:8:4.71:16,5,0	0/0:3,0:1:3.01:0,3,68	0/0:4,0:4:6.01:0,6,89	0/0:5,0:4:9.01:0,9,156	1/1:5,0:5:2.84:15,3,0	0/1:11,0:10:7.05:19,0,7	0/1:28,1:25:25.42:141,0,25	0/1:8,0:5:0:1,0,0	0/1:10,0:7:10.89:11,0,45	0/1:6,0:6:33.32:33,0,68	0/1:6,0:6:34.08:34,0,37	0/0:2,0:2:3.01:0,3,30	0/0:2,0:2:3:0,3,26	0/0:3,0:3:2.56:0,3,51	0/1:9,0:7:33.90:48,0,34	0/0:11,0:11:4.85:0,5,33	0/1:5,1:6:15.18:60,0,15	1/1:5,0:4:0.89:2,1,0
chr10	84109999	.	CCT	C	1184.06	PASS	AB=0.980;AC=23;AF=0.411;AN=56;BaseQRankSum=3.332;DP=284;FS=14.394;HRun=0;HaplotypeScore=41.2890;InbreedingCoeff=0.1913;MQ=67.29;MQ0=26;MQRankSum=-0.366;QD=6.88;ReadPosRankSum=7.335;VQSLOD=0.5353;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:21:33.13:236,33,0	1/1:1,5:6:8.83:104,9,0	0/0:33,0:14:17.54:0,18,297	0/0:25,0:10:14.47:0,14,109	0/0:8,0:6:5.47:0,5,73	0/0:9,0:9:20.96:0,21,202	0/1:7,0:5:21.09:21,0,34	0/1:14,0:10:19.21:19,0,61	0/0:6,0:5:5.68:0,6,32	1/1:1,6:7:8.96:82,9,0	1/1:1,6:6:6:82,6,0	0/0:4,0:2:6.01:0,6,79	0/0:5,0:5:9:0,9,99	0/0:7,0:5:9.01:0,9,127	1/1:5,0:5:8.20:27,8,0	1/1:2,9:10:12.03:164,12,0	1/1:7,20:25:30.50:476,31,0	0/1:9,0:6:9.59:10,0,13	0/1:11,0:8:13.98:14,0,75	0/1:7,1:8:10.51:11,0,108	0/1:7,0:7:22.11:22,0,35	0/0:2,0:2:2.22:0,2,7	0/0:1,0:1:3:0,3,26	0/0:3,0:3:2.98:0,3,31	0/0:9,0:7:15.39:0,15,89	0/1:13,1:14:16.50:17,0,107	0/1:7,0:7:11.16:42,0,11	0/1:6,0:5:12.86:37,0,13
chr10	84110248	.	CTCTTT	C	720.55	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.346;DP=409;FS=9.617;HRun=0;HaplotypeScore=96.2669;InbreedingCoeff=0.9018;MQ=63.83;MQ0=1;MQRankSum=-1.844;QD=37.92;ReadPosRankSum=1.281;VQSLOD=2.7289;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,13:19:45.02:815,45,0	0/0:7,0:7:21.05:0,21,410	0/0:11,0:7:17.66:0,18,203	0/0:7,0:3:8.53:0,9,115	0/0:22,0:22:51.16:0,51,1235	0/0:13,0:13:39.10:0,39,921	0/0:15,0:15:42.61:0,43,887	0/0:25,0:24:67.12:0,67,1037	0/0:9,0:9:27.08:0,27,739	0/0:14,0:14:39.03:0,39,679	0/0:24,0:24:66.04:0,66,993	0/0:7,0:7:21.03:0,21,389	0/0:19,0:19:45:0,45,952	0/0:11,0:11:30.61:0,31,568	0/0:13,0:12:30.08:0,30,568	0/0:18,0:18:53.20:0,53,804	0/0:19,0:19:57.16:0,57,1038	0/0:21,0:21:63.13:0,63,1185	0/0:21,0:20:53.61:0,54,804	0/0:14,0:14:39.07:0,39,708	0/0:13,0:13:39.04:0,39,651	0/0:5,0:5:15.01:0,15,309	0/0:10,0:10:27.06:0,27,492	0/0:14,0:14:36.54:0,37,810	0/0:14,0:14:38.88:0,39,638	0/0:23,0:23:60.07:0,60,917	0/0:14,0:14:42.10:0,42,753	0/0:7,0:7:18.04:0,18,349
chr10	84110250	.	CT	C	1099.45	PASS	AB=0.787;AC=20;AF=0.357;AN=56;BaseQRankSum=0.430;DP=439;FS=5.229;HRun=15;HaplotypeScore=69.0242;InbreedingCoeff=0.3716;MQ=62.43;MQ0=1;MQRankSum=2.154;QD=4.91;ReadPosRankSum=2.792;VQSLOD=2.1700;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:26.20:83,26,0	0/1:3,4:7:9.09:62,0,9	0/0:8,0:5:9.64:0,10,55	0/1:9,0:4:3.56:4,0,24	0/1:19,4:25:12.59:13,0,242	0/1:11,3:14:8.56:9,0,175	0/0:15,1:16:18.30:0,18,149	0/0:27,0:26:29.85:0,30,138	0/0:11,0:11:26.98:0,27,232	1/1:7,6:13:14.63:96,15,0	1/1:9,15:25:34.42:217,34,0	0/1:10,2:12:4.27:4,0,88	0/0:24,0:24:35.94:0,36,301	0/0:12,0:13:18.77:0,19,144	0/0:12,1:12:22.50:0,23,106	1/1:8,10:21:12.82:168,13,0	1/1:7,14:21:23.88:281,24,0	0/0:21,1:22:25.52:0,26,205	0/0:19,0:18:5.15:0,5,78	0/1:11,2:13:7.01:7,0,91	0/0:11,1:12:2.34:0,2,76	0/0:5,0:5:3:0,3,27	0/0:11,0:11:11.96:0,12,96	0/0:15,0:19:26.83:0,27,221	0/1:8,8:16:31.99:75,0,32	1/1:10,11:23:33.36:204,33,0	0/0:14,0:14:22.87:0,23,122	0/1:2,5:7:11.54:62,0,12
chr10	84110738	.	CCT	C	276.52	PASS	AB=0.900;AC=14;AF=0.304;AN=46;BaseQRankSum=1.171;DP=191;FS=1.862;HRun=0;HaplotypeScore=26.3077;InbreedingCoeff=0.2767;MQ=34.91;MQ0=30;MQRankSum=-2.197;QD=3.37;ReadPosRankSum=-0.864;VQSLOD=1.1185;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:11:3.83:4,0,47	./.	0/1:26,0:3:5.91:6,0,26	0/0:31,0:4:1.50:0,2,9	0/0:8,0:8:3.90:0,4,39	0/0:6,0:6:12.04:0,12,192	1/1:3,1:4:1.12:29,1,0	1/1:16,4:17:5.40:212,5,0	0/0:2,0:1:3.01:0,3,38	0/0:2,0:1:3.01:0,3,51	./.	0/0:6,0:6:9.21:0,9,107	./.	0/0:6,0:4:3.01:0,3,53	0/1:1,2:3:0:0,0,0	0/0:2,0:2:6.02:0,6,81	0/1:9,0:6:4:23,0,4	1/1:3,0:3:5.99:56,6,0	1/1:2,1:1:3.01:34,3,0	0/0:5,1:5:0.47:0,0,1	0/0:6,5:7:0.47:0,0,1	0/0:2,0:2:3.01:0,3,37	0/0:5,0:3:3.01:0,3,49	./.	0/0:3,0:2:3.01:0,3,34	0/0:9,0:9:24.03:0,24,362	1/1:2,0:1:3.01:33,3,0	./.
chr10	84111443	.	G	GT	2664.21	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.606;DP=673;FS=1.284;HRun=10;HaplotypeScore=69.0647;InbreedingCoeff=0.9474;MQ=72.85;MQ0=2;MQRankSum=0.220;QD=22.58;ReadPosRankSum=1.036;VQSLOD=4.5604;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:30:76.92:0,77,621	1/1:1,11:12:29.99:305,30,0	0/0:32,0:25:13.70:0,14,269	0/0:18,0:13:15.64:0,16,145	0/0:34,1:35:54.89:0,55,655	0/0:29,0:30:79.90:0,80,641	0/0:14,0:16:6.19:0,6,224	0/0:29,1:30:27.92:0,28,435	0/0:21,0:22:58.97:0,59,474	1/1:6,19:25:7.44:458,7,0	1/1:2,16:18:23.69:440,24,0	0/0:20,1:22:20.97:0,21,368	0/0:17,0:18:46.94:0,47,371	0/0:30,0:30:80.88:0,81,662	0/0:48,0:48:85.03:0,85,898	1/1:4,29:33:81.20:864,81,0	1/1:5,25:30:72.18:768,72,0	0/0:9,0:10:23:0,23,176	0/0:21,0:21:41.80:0,42,335	0/0:33,0:33:85.65:0,86,679	0/0:13,0:13:32.96:0,33,271	0/0:12,0:13:31.99:0,32,251	0/0:24,0:24:65.91:0,66,542	0/0:13,0:13:32.93:0,33,268	0/0:23,0:23:61.95:0,62,499	0/0:29,0:29:62.63:0,63,505	0/0:34,0:34:86.84:0,87,710	0/0:10,0:10:29.71:0,30,233
chr10	84111878	.	CT	C	684.27	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.921;DP=560;FS=9.471;HRun=2;HaplotypeScore=50.9423;InbreedingCoeff=0.9924;MQ=76.83;MQ0=0;MQRankSum=-1.184;QD=29.75;ReadPosRankSum=1.365;VQSLOD=2.1483;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.29:0,87,1302	0/0:9,0:9:27.08:0,27,385	0/0:15,0:15:45.15:0,45,662	0/0:9,0:9:24.08:0,24,340	0/0:19,0:19:57.18:0,57,834	0/0:23,0:23:66.22:0,66,988	0/0:11,0:11:30.10:0,30,449	0/0:35,0:35:99:0,105,1557	0/0:21,0:21:63.20:0,63,924	0/0:19,0:19:54.18:0,54,810	0/0:15,0:15:45.15:0,45,674	0/0:20,0:20:57.19:0,57,853	0/0:16,0:16:42.13:0,42,608	0/0:16,0:16:48.16:0,48,720	0/0:28,0:28:81.24:0,81,1189	0/0:27,0:27:81.27:0,81,1214	0/0:29,0:29:84.28:0,84,1259	0/0:21,0:21:60.20:0,60,899	0/0:21,0:21:59.99:0,60,898	0/0:22,0:22:63.21:0,63,943	0/0:26,0:26:78.26:0,78,1168	0/0:18,0:18:54.18:0,54,808	0/0:17,0:17:45.14:0,45,651	0/0:19,0:19:54.18:0,54,809	1/1:0,23:23:60.20:779,60,0	0/0:17,0:17:51.16:0,51,746	0/0:28,0:28:84.19:0,84,1189	0/0:7,0:7:21.07:0,21,315
chr10	84111987	.	CA	C	1669.18	PASS	AB=0.823;AC=18;AF=0.321;AN=56;BaseQRankSum=7.602;DP=580;FS=3.789;HRun=14;HaplotypeScore=68.2598;InbreedingCoeff=0.5226;MQ=62.44;MQ0=4;MQRankSum=1.184;QD=6.55;ReadPosRankSum=3.474;VQSLOD=2.8042;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,27:41:67.61:435,68,0	1/1:1,3:4:8.92:62,9,0	0/0:15,0:4:6:0,6,51	0/0:9,0:4:11.17:0,11,66	0/1:28,5:34:34.72:35,0,243	0/0:15,0:15:26.96:0,27,235	0/1:10,5:15:31.72:32,0,164	0/0:28,1:30:42.17:0,42,493	0/0:16,1:17:9.44:0,9,226	1/1:10,7:17:0.44:127,0,0	1/1:10,17:28:40.38:272,40,0	0/0:19,0:19:31.20:0,31,263	0/0:13,2:15:11.94:0,12,99	0/0:14,1:15:24.03:0,24,223	0/0:25,1:26:2.33:0,2,259	1/1:9,23:34:39.64:378,40,0	1/1:8,25:33:59.43:411,59,0	0/0:16,0:16:15.46:0,15,133	0/0:13,0:12:29.68:0,30,239	0/0:24,0:29:40.02:0,40,387	0/0:29,0:29:37.27:0,37,351	0/0:13,1:17:4.47:0,4,154	0/1:15,2:18:8.97:9,0,237	0/0:21,1:22:18.45:0,18,309	1/1:4,0:17:22.39:65,22,0	0/1:9,3:13:31.61:32,0,126	0/0:26,3:30:15.68:0,16,400	0/0:4,0:4:3:0,3,28
chr10	84112653	.	T	TGGAG	441.76	PASS	AC=10;AF=0.208;AN=48;BaseQRankSum=-2.693;DP=217;FS=7.080;HRun=0;HaplotypeScore=41.0196;InbreedingCoeff=0.6170;MQ=72.50;MQ0=1;MQRankSum=0.055;QD=12.99;ReadPosRankSum=-2.328;VQSLOD=0.8477;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:12.04:0,12,193	./.	0/0:19,0:13:13.55:0,14,166	0/0:13,0:8:2.87:0,3,32	0/0:14,0:14:12.04:0,12,193	0/0:6,0:6:6.02:0,6,97	1/1:5,1:5:9.01:168,9,0	1/1:6,1:8:6.01:98,6,0	0/0:8,0:8:9.03:0,9,145	0/0:8,0:8:12.04:0,12,193	0/0:10,0:10:18.05:0,18,264	0/0:6,0:6:15.04:0,15,210	0/0:7,0:7:3.01:0,3,48	0/0:5,0:5:9.03:0,9,145	0/0:14,0:14:24.07:0,24,359	0/0:10,0:10:18.06:0,18,287	0/0:6,0:6:9:0,9,119	0/0:7,0:7:5.99:0,6,69	./.	1/1:4,5:9:9.03:199,9,0	1/1:4,0:4:5.94:41,6,0	0/0:10,0:10:18.06:0,18,290	0/0:14,0:14:32.39:0,32,527	0/0:5,0:5:2.98:0,3,22	./.	0/0:4,0:4:3.01:0,3,48	1/1:5,1:6:3.01:72,3,0	./.
chr10	84113487	.	AG	A	463.04	PASS	AB=0.800;AC=3;AF=0.054;AN=56;BaseQRankSum=3.272;DP=524;FS=9.622;HRun=2;HaplotypeScore=70.5445;InbreedingCoeff=0.5950;MQ=73.85;MQ0=0;MQRankSum=0.977;QD=17.81;ReadPosRankSum=-1.155;VQSLOD=2.4800;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,9:22:54.66:552,55,0	0/0:8,0:8:24.04:0,24,301	0/0:25,0:17:19.21:0,19,253	0/0:18,0:13:16.50:0,17,149	0/0:31,0:31:89.89:0,90,1117	0/0:16,0:16:32.90:0,33,401	0/0:10,0:10:22.14:0,22,143	0/0:32,0:32:72.69:0,73,596	0/0:14,0:14:39.12:0,39,534	0/0:28,0:28:84.16:0,84,924	0/0:24,0:24:61:0,61,614	0/0:15,0:15:16.41:0,16,478	0/0:20,0:20:46.90:0,47,643	0/0:18,0:18:52.65:0,53,608	0/0:21,0:21:60.02:0,60,670	0/0:20,0:20:47.14:0,47,496	0/0:16,0:16:42.69:0,43,534	0/0:13,0:13:18:0,18,172	0/0:17,1:18:27.86:0,28,315	0/0:20,0:20:26.29:0,26,228	0/1:3,1:4:15.95:16,0,45	0/0:16,0:16:30.21:0,30,490	0/0:28,0:28:79.84:0,80,934	0/0:7,0:7:20.28:0,20,243	0/0:23,0:23:60.37:0,60,730	0/0:23,0:23:41.25:0,41,340	0/0:30,0:30:54.03:0,54,395	0/0:4,0:4:6.17:0,6,15
chr10	84113489	.	GT	G	1059.27	PASS	AB=0.769;AC=16;AF=0.286;AN=56;BaseQRankSum=4.974;DP=540;FS=4.461;HRun=15;HaplotypeScore=71.1879;InbreedingCoeff=0.2218;MQ=73.35;MQ0=1;MQRankSum=-0.449;QD=4.90;ReadPosRankSum=1.392;VQSLOD=2.2451;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:71.94:77,0,72	0/0:7,0:8:20.84:0,21,172	0/0:26,0:17:0.27:0,0,70	0/1:15,1:13:9.67:10,0,45	0/0:31,1:36:61.58:0,62,602	0/1:11,4:17:16.03:16,0,220	1/1:3,4:9:12.91:69,13,0	0/1:17,14:32:41.04:184,0,41	0/0:15,0:16:35.83:0,36,302	0/0:24,0:28:41.35:0,41,317	0/0:20,2:26:9.52:0,10,292	0/0:13,2:15:9.71:0,10,233	0/0:18,2:21:12.29:0,12,329	0/0:16,2:18:0.44:0,0,246	0/0:11,0:23:46.24:0,46,285	0/1:14,3:19:19.38:19,0,179	0/0:15,2:17:3.25:0,3,256	0/0:3,0:13:11.36:0,11,56	0/1:10,8:18:67.38:117,0,67	0/1:6,13:20:1.16:176,0,1	1/1:2,1:3:5.91:38,6,0	0/0:16,1:18:19.45:0,19,268	0/0:23,0:28:39.29:0,39,446	0/0:4,1:7:1.39:0,1,109	0/0:20,2:24:9.29:0,9,311	1/1:8,12:22:16.04:216,16,0	0/1:11,18:30:3.63:225,0,4	1/1:0,4:4:11.82:77,12,0
chr10	84116905	.	CA	C	1834.69	PASS	AB=0.835;AC=20;AF=0.370;AN=54;BaseQRankSum=7.272;DP=518;FS=3.003;HRun=13;HaplotypeScore=87.9943;InbreedingCoeff=0.4634;MQ=71.29;MQ0=0;MQRankSum=-7.653;QD=7.31;ReadPosRankSum=2.336;VQSLOD=3.0185;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:27:37.24:0,37,206	0/0:2,0:4:8.69:0,9,58	0/1:25,0:15:1.18:1,0,100	0/0:14,0:11:8.64:0,9,46	0/0:25,2:29:8.36:0,8,435	0/0:19,0:22:41.90:0,42,393	1/1:2,3:5:8.93:65,9,0	1/1:18,12:32:0.44:286,0,0	0/1:15,2:17:1.72:2,0,299	0/0:8,0:24:48.40:0,48,307	0/0:10,0:32:47.64:0,48,286	0/0:10,0:10:24.03:0,24,229	0/1:17,2:19:16.46:16,0,322	0/0:11,2:13:8.98:0,9,213	1/1:5,15:21:26.51:346,27,0	0/0:5,0:17:31.58:0,32,187	0/0:5,0:20:49.69:0,50,254	1/1:4,8:12:23.56:175,24,0	0/1:9,6:16:54.91:108,0,55	1/1:10,11:24:14.03:211,14,0	./.	0/0:16,1:18:1.19:0,1,316	0/1:19,3:23:11.83:12,0,359	0/0:10,0:12:16.68:0,17,136	0/0:16,1:22:20.99:0,21,385	1/1:3,20:25:33.91:387,34,0	0/1:9,13:22:58.67:252,0,59	1/1:2,7:9:20.87:153,21,0
chr10	84116928	.	GA	G	3827.55	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.245;DP=564;FS=2.145;HRun=8;HaplotypeScore=94.6427;InbreedingCoeff=0.9802;MQ=74.09;MQ0=1;MQRankSum=-7.181;QD=24.54;ReadPosRankSum=0.019;VQSLOD=3.8561;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:48.10:0,48,553	0/0:4,0:4:12.04:0,12,145	0/0:30,0:21:26.48:0,26,417	0/0:13,0:10:17.99:0,18,138	0/0:36,0:36:99:0,102,1195	0/0:20,0:20:39.12:0,39,471	1/1:1,6:7:18.02:174,18,0	1/1:7,30:37:89.98:844,90,0	0/0:20,0:20:51.16:0,51,616	0/0:21,0:21:54.16:0,54,644	0/0:28,0:28:75.21:0,75,893	0/0:14,0:14:35.98:0,36,413	0/0:18,0:18:36.07:0,36,418	0/0:14,0:14:36.07:0,36,393	1/1:5,18:23:63.09:607,63,0	0/0:19,0:19:45.10:0,45,518	0/0:23,0:23:57.12:0,57,661	1/1:3,10:13:27.02:254,27,0	1/1:4,17:21:57.06:540,57,0	1/1:3,23:26:69.05:656,69,0	1/1:0,3:3:9.01:87,9,0	0/0:20,0:20:54.16:0,54,642	0/0:21,0:21:57.17:0,57,679	0/0:11,0:11:24.06:0,24,277	0/0:24,0:24:66.15:0,66,754	0/0:34,0:34:90.27:0,90,1078	1/1:7,19:26:69.11:665,69,0	0/0:10,0:10:18.06:0,18,217
chr10	84117913	.	C	CA	5376.09	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-8.391;DP=609;FS=3.912;HRun=8;HaplotypeScore=62.9883;InbreedingCoeff=0.9913;MQ=69.93;MQ0=1;MQRankSum=-1.320;QD=24.89;ReadPosRankSum=-1.956;VQSLOD=4.9407;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.03:0,81,741	0/0:11,0:11:33.02:0,33,302	0/0:12,0:11:20.98:0,21,183	0/0:10,0:10:13.40:0,13,83	0/0:32,0:32:96.05:0,96,879	0/0:19,0:19:51.03:0,51,467	1/1:2,16:18:45.13:519,45,0	1/1:3,26:29:78.22:890,78,0	0/0:23,0:23:63.03:0,63,577	0/0:29,0:29:72.03:0,72,659	0/0:27,0:27:68.99:0,69,624	0/0:19,0:19:54.03:0,54,494	0/0:31,0:31:74.99:0,75,676	0/0:14,0:15:44.03:0,44,381	1/1:2,0:26:59.63:303,60,0	0/0:21,0:21:54.01:0,54,490	0/0:33,0:33:90.05:0,90,824	1/1:2,0:17:42.61:216,43,0	1/1:1,23:24:69.18:785,69,0	1/1:3,18:22:47.97:534,48,0	1/1:3,13:16:36.11:415,36,0	0/0:17,0:17:42.01:0,42,384	0/0:26,0:26:63.01:0,63,572	0/0:20,0:20:54.02:0,54,494	0/0:17,0:17:45.02:0,45,412	1/1:3,23:26:44.76:750,45,0	1/1:6,27:33:72.21:825,72,0	1/1:0,4:4:12.04:138,12,0
chr10	84118538	.	TTG	T	803	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.635;DP=785;FS=17.035;HRun=0;HaplotypeScore=110.1801;InbreedingCoeff=0.9884;MQ=69.07;MQ0=1;MQRankSum=0.392;QD=25.09;ReadPosRankSum=0.094;VQSLOD=3.4389;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,1538	0/0:10,0:10:30.10:0,30,477	0/0:38,0:25:26.53:0,27,660	0/0:38,0:22:17.20:0,17,326	0/0:37,0:37:99:0,109,1455	0/0:28,0:28:80.84:0,81,1079	0/0:15,0:15:42.06:0,42,420	0/0:37,0:37:99:0,102,964	0/0:33,0:33:98.84:0,99,1425	0/0:34,0:34:99:0,102,1447	0/0:22,0:22:62.95:0,63,844	0/0:23,0:23:66.17:0,66,996	0/0:22,0:22:66.14:0,66,945	0/0:29,0:29:84.19:0,84,1219	0/0:33,0:33:75.13:0,75,754	0/0:27,0:27:78.07:0,78,1186	0/0:29,0:29:87.26:0,87,1322	0/0:19,0:19:44.56:0,45,411	0/0:20,0:19:43.86:0,44,385	0/0:22,0:22:65.39:0,65,609	0/0:24,0:24:54.05:0,54,526	0/0:31,0:31:92.47:0,92,1345	0/0:31,0:31:90.24:0,90,1339	0/0:30,0:30:84.18:0,84,1175	1/1:2,30:32:60.20:898,60,0	0/0:36,0:36:99:0,105,1465	0/0:36,0:34:84.02:0,84,833	0/0:11,0:11:33.11:0,33,526
chr10	84118540	.	G	GT	3568.11	PASS	AB=0.950;AC=19;AF=0.339;AN=56;BaseQRankSum=-5.942;DP=782;FS=12.195;HRun=11;HaplotypeScore=88.5069;InbreedingCoeff=0.7522;MQ=71.79;MQ0=1;MQRankSum=0.393;QD=11.22;ReadPosRankSum=-0.232;VQSLOD=1.6909;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,3:35:24.07:24,0,518	0/0:10,0:10:24.37:0,24,187	0/0:39,0:26:3.42:0,3,258	0/1:38,0:24:1.58:2,0,105	0/1:35,3:39:80.93:81,0,478	0/0:24,2:28:27.40:0,27,376	1/1:3,10:14:35.90:343,36,0	1/1:15,20:37:68.68:626,69,0	0/0:30,3:34:24.82:0,25,548	0/0:33,1:34:35.14:0,35,449	0/0:20,0:22:40:0,40,278	0/0:22,0:22:56.76:0,57,441	0/0:22,0:22:53.76:0,54,417	0/0:28,0:28:62.66:0,63,482	1/1:4,28:33:43.61:602,44,0	0/0:25,0:26:70.76:0,71,540	0/0:29,0:29:62.65:0,63,487	1/1:8,12:20:6.75:237,7,0	1/1:6,8:15:23.63:195,24,0	1/1:8,16:24:44.73:394,45,0	1/1:5,18:23:39.08:396,39,0	0/0:32,0:32:43.19:0,43,525	0/0:32,0:32:65.63:0,66,507	0/0:27,2:29:32.05:0,32,422	0/0:31,0:31:33.73:0,34,97	0/0:32,1:34:37.21:0,37,457	1/1:4,31:35:68.81:668,69,0	0/0:12,0:12:32.87:0,33,255
chr10	84120183	.	TA	T	743.44	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.872;DP=553;FS=6.304;HRun=1;HaplotypeScore=51.8062;InbreedingCoeff=0.9907;MQ=74.57;MQ0=0;MQRankSum=-0.591;QD=35.40;ReadPosRankSum=1.440;VQSLOD=3.3763;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1581	0/0:9,0:9:27.09:0,27,431	0/0:19,0:19:57.19:0,57,890	0/0:15,0:15:39.13:0,39,608	0/0:30,0:30:87.30:0,87,1389	0/0:22,0:22:63.21:0,63,1004	0/0:15,0:15:45.14:0,45,693	0/0:32,0:32:90.30:0,90,1420	0/0:26,0:26:78.25:0,78,1216	0/0:22,0:21:63.21:0,63,1007	0/0:16,0:16:48.16:0,48,767	0/0:19,0:19:57.19:0,57,911	0/0:14,0:14:42.12:0,42,646	0/0:28,0:28:84.27:0,84,1314	0/0:21,0:21:63.21:0,63,1007	0/0:23,0:23:69.24:0,69,1099	0/0:16,0:16:45.15:0,45,719	0/0:13,0:13:39.08:0,39,572	0/0:21,0:21:63.20:0,63,964	0/0:20,0:20:60.17:0,60,903	0/0:24,0:24:72.19:0,72,1074	0/0:12,0:12:36.11:0,36,552	0/0:13,0:13:39.13:0,39,623	0/0:15,0:15:42.14:0,42,671	1/1:0,21:21:60.20:838,60,0	0/0:20,0:20:60.20:0,60,959	0/0:27,0:26:81.25:0,81,1241	0/0:6,0:6:18.06:0,18,288
chr10	84120631	.	CT	C	367.09	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=2.833;DP=427;FS=2.876;HRun=1;HaplotypeScore=59.5734;InbreedingCoeff=0.8935;MQ=60.19;MQ0=12;MQRankSum=-0.195;QD=30.59;ReadPosRankSum=1.421;VQSLOD=3.4284;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.28:0,81,1295	./.	0/0:12,0:3:6.49:0,6,91	0/0:13,0:5:15:0,15,192	0/0:15,0:15:45.14:0,45,696	0/0:21,0:21:63.21:0,63,1007	0/0:12,0:12:33.07:0,33,478	0/0:29,0:27:81.27:0,81,1272	0/0:11,0:11:29.85:0,30,479	0/0:22,0:22:63.21:0,63,998	0/0:15,0:15:45.15:0,45,716	0/0:13,0:13:39.13:0,39,616	0/0:12,0:12:36.12:0,36,575	0/0:15,0:15:45.15:0,45,718	0/0:13,0:13:39.13:0,39,624	0/0:9,0:8:24.08:0,24,384	0/0:21,0:20:54.18:0,54,863	0/0:17,0:17:48.12:0,48,739	0/0:16,0:15:45.15:0,45,713	0/0:14,0:14:42.14:0,42,667	0/0:29,0:28:72.25:0,72,1151	0/0:8,0:8:24.08:0,24,384	0/0:10,0:10:30.09:0,30,457	0/0:11,0:11:30.10:0,30,480	1/1:0,12:12:33.11:461,33,0	0/0:21,0:21:63.21:0,63,1008	0/0:17,0:16:51.17:0,51,815	0/0:10,0:10:30.10:0,30,480
chr10	84121385	.	ACAAT	A	269.43	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.733;DP=703;FS=0.000;HRun=0;HaplotypeScore=110.5255;InbreedingCoeff=0.9874;MQ=88.95;MQ0=0;MQRankSum=-1.660;QD=29.94;ReadPosRankSum=0.108;VQSLOD=3.4552;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,2714	0/0:10,0:10:30.10:0,30,752	0/0:29,0:29:84.29:0,84,2183	0/0:21,0:22:60.16:0,60,1489	0/0:28,0:28:81.24:0,81,2023	0/0:46,0:46:99:0,132,3517	0/0:27,0:27:78.27:0,78,2070	0/0:32,0:32:90.29:0,90,2250	0/0:23,0:23:66.23:0,66,1780	0/0:22,0:22:66.22:0,66,1714	0/0:21,0:21:63.22:0,63,1689	0/0:30,0:30:90.31:0,90,2419	0/0:35,0:35:99:0,102,2713	0/0:28,0:28:81.28:0,81,2159	0/0:39,0:39:99:0,117,3103	0/0:24,0:24:72.25:0,72,1892	0/0:21,0:21:57.20:0,57,1527	0/0:15,0:15:39.13:0,39,965	0/0:32,0:32:96.32:0,96,2450	0/0:17,0:17:48.16:0,48,1274	0/0:26,0:26:77.29:0,77,2019	0/0:16,0:16:48.15:0,48,1229	0/0:23,0:23:66.21:0,66,1700	0/0:32,0:32:96.33:0,96,2530	1/1:0,9:9:21.03:362,21,0	0/0:29,0:29:84.28:0,84,2212	0/0:27,0:27:81.28:0,81,2145	0/0:6,0:6:18.06:0,18,476
chr10	84122581	.	C	CA	1976.06	PASS	AB=0.927;AC=24;AF=0.429;AN=56;BaseQRankSum=-3.050;DP=578;FS=0.397;HRun=12;HaplotypeScore=71.6907;InbreedingCoeff=0.2157;MQ=71.17;MQ0=3;MQRankSum=-0.687;QD=5.23;ReadPosRankSum=-0.718;VQSLOD=1.6994;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,17:22:19.87:330,20,0	1/1:2,7:9:0.72:103,1,0	0/1:25,0:14:5.72:6,0,51	0/1:24,0:17:4.86:5,0,48	0/1:30,2:32:15.68:16,0,364	0/1:20,2:25:22.59:23,0,335	0/0:11,0:12:2.70:0,3,171	0/0:22,0:23:28.76:0,29,203	0/0:16,0:16:12.26:0,12,216	1/1:8,17:26:9.25:369,9,0	1/1:9,13:22:19.90:326,20,0	0/0:16,0:18:10.88:0,11,141	0/0:17,0:17:45.61:0,46,317	0/0:20,0:20:37.49:0,37,319	0/1:20,3:23:7.66:8,0,277	1/1:8,20:28:18.15:380,18,0	1/1:9,15:25:13.72:267,14,0	0/1:19,1:20:22.67:23,0,179	0/1:14,1:16:8.40:8,0,166	0/0:10,0:10:26.35:0,26,184	0/1:13,6:19:99:108,0,121	0/1:9,1:11:6.27:6,0,113	0/0:12,0:13:28.87:0,29,202	0/0:13,1:14:8.58:0,9,211	1/1:12,0:19:35.93:165,36,0	0/1:26,2:29:17.06:17,0,312	0/0:36,0:38:48.53:0,49,449	0/0:14,1:18:1.55:0,2,174
chr10	84122671	.	G	GT	409.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.477;DP=518;FS=6.098;HRun=3;HaplotypeScore=51.5495;InbreedingCoeff=0.9672;MQ=88.89;MQ0=0;MQRankSum=-0.513;QD=27.30;ReadPosRankSum=1.374;VQSLOD=2.6014;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.18:0,60,719	0/0:8,0:8:18.04:0,18,204	0/0:19,0:19:48.13:0,48,563	0/0:19,0:19:50.94:0,51,575	0/0:32,0:32:93.29:0,93,1116	0/0:20,0:20:57.17:0,57,684	0/0:6,0:6:18.04:0,18,205	0/0:20,0:20:57.16:0,57,667	0/0:19,0:19:51.14:0,51,598	0/0:21,0:21:57.17:0,57,676	0/0:16,0:16:45.14:0,45,540	0/0:22,0:22:66.19:0,66,781	0/0:22,0:22:63.19:0,63,756	0/0:16,0:16:48.15:0,48,576	0/0:33,0:32:90.27:0,90,1080	0/0:32,0:31:93.26:0,93,1103	0/0:17,0:17:48.15:0,48,576	0/0:13,0:13:32.69:0,33,393	0/0:10,0:10:30.08:0,30,349	0/0:17,0:17:51.16:0,51,612	0/0:13,0:13:30.09:0,30,360	0/0:11,0:11:30.09:0,30,360	0/0:13,0:13:39.10:0,39,456	0/0:19,0:19:57.17:0,57,684	1/1:0,15:15:36.12:504,36,0	0/0:25,0:25:75.23:0,75,899	0/0:31,0:31:87.27:0,87,1043	0/0:5,0:5:15.05:0,15,180
chr10	84122891	.	CT	C	895.61	PASS	AB=0.934;AC=9;AF=0.161;AN=56;BaseQRankSum=7.673;DP=491;FS=3.351;HRun=11;HaplotypeScore=52.8029;InbreedingCoeff=0.5748;MQ=66.61;MQ0=7;MQRankSum=2.021;QD=9.05;ReadPosRankSum=-0.221;VQSLOD=2.1954;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,16:22:41.93:345,42,0	0/0:9,1:10:5.43:0,5,263	0/1:17,0:11:10.04:10,0,63	0/1:16,1:11:21.87:22,0,46	0/0:26,0:26:66.14:0,66,684	0/0:13,0:13:33.08:0,33,352	0/0:6,0:6:12.03:0,12,128	0/0:33,1:28:35.51:0,36,582	0/0:14,0:14:42.06:0,42,434	0/0:19,0:19:48.12:0,48,506	0/0:21,0:20:45.10:0,45,469	0/0:9,0:9:26.90:0,27,259	0/0:23,0:23:57.12:0,57,593	0/0:11,1:12:8.42:0,8,283	1/1:1,14:15:32.96:271,33,0	0/0:14,0:13:30.06:0,30,313	0/0:29,0:29:34.02:0,34,666	1/1:1,20:21:47.94:394,48,0	0/0:22,1:23:29.48:0,29,511	0/0:21,0:21:48.12:0,48,512	0/0:5,0:5:15.02:0,15,151	0/1:5,1:6:9.61:10,0,113	0/0:9,0:9:18.05:0,18,192	0/0:5,0:5:15.04:0,15,160	0/0:23,0:23:60.09:0,60,626	0/0:29,1:30:53.55:0,54,770	0/0:28,0:28:69.13:0,69,713	0/0:17,1:18:26.48:0,26,480
chr10	84124483	.	TGGTTC	T	2170.84	PASS	AB=0.949;AC=15;AF=0.278;AN=54;BaseQRankSum=-0.500;DP=416;FS=3.719;HRun=0;HaplotypeScore=82.0693;InbreedingCoeff=-0.3949;MQ=42.32;MQ0=30;MQRankSum=1.517;QD=9.01;ReadPosRankSum=-1.190;VQSLOD=1.7627;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:75.41:0,75,1330	0/0:4,0:3:4.59:0,5,16	0/1:13,0:6:7.77:8,0,54	0/0:10,0:6:7.79:0,8,50	0/0:21,0:20:50.87:0,51,914	0/0:21,0:19:57.20:0,57,1358	0/1:6,0:5:21.96:22,0,184	0/1:21,13:31:99:532,0,669	0/0:7,0:7:17.86:0,18,302	0/1:8,0:4:32.40:32,0,167	0/1:11,0:10:56.95:114,0,57	0/0:14,0:14:28.60:0,29,692	0/0:14,0:13:28.97:0,29,635	0/0:14,0:13:35.97:0,36,706	0/1:14,0:12:74.35:74,0,375	0/1:15,0:10:99:145,0,208	0/1:20,0:16:99:116,0,199	0/1:7,0:5:60.68:61,0,69	0/1:20,0:16:99:174,0,369	0/1:11,0:11:99:130,0,334	0/1:11,0:8:99:103,0,156	0/0:6,0:4:12.04:0,12,243	0/0:11,0:10:25.91:0,26,419	0/0:16,0:15:16.14:0,16,392	./.	0/1:26,0:27:99:298,0,750	0/1:19,0:20:99:303,0,389	0/1:16,0:12:99:212,0,148
chr10	84124752	.	TAGAC	T	811.64	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.797;DP=510;FS=0.000;HRun=0;HaplotypeScore=83.9845;InbreedingCoeff=0.9825;MQ=87.06;MQ0=1;MQRankSum=-2.720;QD=40.58;ReadPosRankSum=0.638;VQSLOD=3.7105;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.23:0,66,1741	0/0:8,0:8:21.07:0,21,564	0/0:19,0:19:50.75:0,51,1072	0/0:18,0:18:19.38:0,19,846	0/0:34,0:34:93.30:0,93,2438	0/0:24,0:24:69.24:0,69,1815	0/0:17,0:17:51.18:0,51,1346	0/0:42,0:42:99:0,120,3116	0/0:17,0:17:51.17:0,51,1340	0/0:22,0:22:57.20:0,57,1505	0/0:8,0:8:21.07:0,21,493	0/0:9,0:9:27.09:0,27,729	0/0:14,0:14:39.13:0,39,1032	0/0:19,0:19:54.07:0,54,1413	0/0:21,0:21:63.22:0,63,1626	0/0:13,0:13:36.12:0,36,971	0/0:26,0:26:75.26:0,75,1986	0/0:11,0:11:30.10:0,30,776	0/0:21,0:21:63.22:0,63,1668	0/0:17,0:17:48.16:0,48,1286	0/0:9,0:9:27.09:0,27,696	0/0:9,0:9:27.08:0,27,664	0/0:19,0:19:47.83:0,48,1291	0/0:16,0:16:42.14:0,42,1099	1/1:0,20:19:48.16:907,48,0	0/0:18,0:17:45.15:0,45,1214	0/0:24,0:24:69.24:0,69,1854	0/0:13,0:13:39.13:0,39,975
chr10	84125036	.	AAT	A	2361.56	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-0.161;DP=545;FS=9.270;HRun=0;HaplotypeScore=90.2928;InbreedingCoeff=0.9416;MQ=69.75;MQ0=15;MQRankSum=-0.437;QD=14.85;ReadPosRankSum=-3.016;VQSLOD=2.2672;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:46.45:0,46,286	0/0:6,0:6:11.97:0,12,96	0/0:22,0:16:39.62:0,40,409	0/0:24,0:16:28.97:0,29,293	0/0:37,0:37:89.30:0,89,684	0/0:29,0:29:60.47:0,60,516	1/1:24,0:24:30.48:290,30,0	1/1:3,30:33:90.03:743,90,0	0/0:11,0:11:24.43:0,24,215	0/0:22,0:20:55.41:0,55,399	0/0:12,0:11:16.09:0,16,146	0/0:20,0:20:33.94:0,34,463	0/0:17,0:17:34.78:0,35,307	0/0:22,0:20:47.98:0,48,479	1/1:15,0:14:26.82:209,27,0	0/0:16,0:16:30.28:0,30,247	0/0:9,0:9:17.66:0,18,124	1/1:7,0:6:5.96:44,6,0	1/1:20,0:20:56.85:478,57,0	1/1:3,13:15:2.94:18,3,0	1/1:19,0:17:40.71:325,41,0	0/0:14,0:14:35.14:0,35,310	0/0:25,0:25:54.98:0,55,493	0/0:27,0:27:31.88:0,32,364	0/0:15,0:15:26.91:0,27,217	0/0:22,0:21:60.51:0,61,583	1/1:25,0:25:58.95:451,59,0	0/0:8,0:7:20.95:0,21,167
chr10	84125039	.	ATCTCTCTC	A	939.38	PASS	AB=0.986;AC=11;AF=0.229;AN=48;BaseQRankSum=1.102;DP=580;FS=15.231;HRun=0;HaplotypeScore=152.6967;InbreedingCoeff=0.4226;MQ=67.15;MQ0=28;MQRankSum=1.625;QD=6.71;ReadPosRankSum=1.340;VQSLOD=1.6823;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:27:88.50:89,0,129	0/0:5,0:6:0.47:0,0,1	./.	0/0:24,0:16:0.47:0,0,1	0/0:39,0:39:15.05:0,15,355	0/1:29,0:29:36.18:36,0,122	0/0:25,0:23:18.53:0,19,494	0/0:41,0:40:14.39:0,14,247	0/0:14,0:13:12.04:0,12,360	1/1:16,7:21:19.34:365,19,0	1/1:10,0:10:2.75:71,3,0	0/0:20,0:20:16.90:0,17,549	0/0:17,0:17:9.92:0,10,272	0/0:21,0:19:15.05:0,15,454	0/0:21,0:18:3.01:0,3,50	1/1:15,0:15:12.04:271,12,0	1/1:10,0:9:9.03:200,9,0	./.	0/0:21,0:21:4.26:0,4,80	./.	0/0:21,0:18:6.02:0,6,219	0/0:17,0:16:11.92:0,12,261	0/0:24,0:24:30.09:0,30,682	0/0:28,0:27:24.08:0,24,722	./.	0/1:21,0:21:51.93:52,0,320	0/0:25,0:25:15.99:0,16,280	0/0:12,0:9:3.01:0,3,58
chr10	84125087	.	CTG	C	210.51	PASS	AB=0.983;AC=11;AF=0.212;AN=52;BaseQRankSum=-0.568;DP=448;FS=2.469;HRun=0;HaplotypeScore=91.5664;InbreedingCoeff=0.1994;MQ=43.07;MQ0=37;MQRankSum=0.381;QD=1.31;ReadPosRankSum=-0.974;VQSLOD=1.5077;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:30:17.71:0,18,142	0/0:8,0:7:2.94:0,3,18	./.	./.	0/1:20,0:20:3.39:3,0,101	0/1:25,0:24:48.93:49,0,165	0/0:26,0:23:18.19:0,18,147	0/0:20,0:18:11.06:0,11,65	0/0:17,0:15:15.33:0,15,113	0/0:20,0:19:28.18:0,28,167	0/1:13,0:11:0:0,0,0	0/1:19,3:21:7.05:7,0,120	0/1:15,0:15:11.61:12,0,103	0/0:24,0:22:20.44:0,20,145	0/0:17,0:16:17.55:0,18,128	0/0:8,0:7:3:0,3,25	0/0:9,0:6:5.85:0,6,34	0/0:6,0:3:0:0,0,0	0/0:7,0:5:2.98:0,3,21	0/0:15,0:14:17.98:0,18,162	0/0:14,0:10:14.01:0,14,106	0/0:19,0:18:22.66:0,23,168	0/0:24,3:27:8.26:0,8,141	0/1:28,0:26:9.89:10,0,141	0/1:16,0:14:10.81:11,0,79	1/1:15,0:14:25.63:186,26,0	0/0:11,0:11:8.97:0,9,71	1/1:7,0:5:8.96:68,9,0
chr10	84126010	.	C	CA	624.78	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.829;DP=616;FS=3.632;HRun=1;HaplotypeScore=62.7344;InbreedingCoeff=0.9973;MQ=67.94;MQ0=0;MQRankSum=-1.395;QD=39.05;ReadPosRankSum=1.073;VQSLOD=4.3201;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1358	0/0:12,0:12:36.12:0,36,467	0/0:19,0:20:58.38:0,58,694	0/0:20,0:19:54.16:0,54,676	0/0:29,0:29:87.28:0,87,1130	0/0:22,0:22:63.19:0,63,802	0/0:21,0:21:63.20:0,63,818	0/0:19,0:19:54.16:0,54,676	0/0:21,0:21:63.20:0,63,818	0/0:26,0:26:69.22:0,69,896	0/0:35,0:35:99:0,105,1323	0/0:18,0:18:51.17:0,51,662	0/0:24,0:24:66.21:0,66,853	0/0:16,0:16:48.14:0,48,609	0/0:20,0:20:60.19:0,60,777	0/0:19,0:19:54.17:0,54,687	0/0:21,0:21:57.17:0,57,724	0/0:23,0:23:69.22:0,69,890	0/0:11,0:11:30.09:0,30,377	0/0:38,0:38:99:0,99,1285	0/0:18,0:18:51.15:0,51,647	0/0:15,0:15:45.15:0,45,584	0/0:34,0:34:99:0,99,1286	0/0:20,0:20:54.16:0,54,685	1/1:0,16:16:48.16:720,48,0	0/0:30,0:30:87.27:0,87,1117	0/0:23,0:23:69.22:0,69,893	0/0:8,0:8:24.06:0,24,297
chr10	84126078	.	AAAAG	A	5122.51	PASS	AB=0.919;AC=14;AF=0.250;AN=56;BaseQRankSum=13.197;DP=565;FS=3.687;HRun=0;HaplotypeScore=90.5023;InbreedingCoeff=0.7983;MQ=66.15;MQ0=1;MQRankSum=-2.175;QD=29.27;ReadPosRankSum=2.398;VQSLOD=4.3545;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,30:35:63.21:1150,63,0	1/1:1,8:9:18.06:336,18,0	0/0:21,0:16:7.28:0,7,686	0/0:16,0:10:6.07:0,6,372	0/0:27,0:27:78.24:0,78,1960	0/0:18,0:18:54.19:0,54,1389	0/0:20,0:20:57.20:0,57,1486	0/0:36,0:36:93.29:0,93,2348	0/0:18,0:18:54.17:0,54,1356	1/1:3,18:21:51.16:922,51,0	1/1:3,23:26:69.22:1185,69,0	0/0:21,0:21:63.20:0,63,1598	0/0:14,0:14:39.13:0,39,978	0/0:13,0:13:36.12:0,36,912	0/0:20,0:20:57.20:0,57,1515	1/1:0,22:22:48.16:888,48,0	1/1:2,17:19:29.22:539,29,0	0/1:18,1:19:4.50:5,0,1099	0/0:18,0:17:51.18:0,51,1285	0/0:31,0:31:90.30:0,90,2267	0/0:12,0:12:36.12:0,36,868	0/0:17,0:17:51.18:0,51,1297	0/0:26,0:26:75.24:0,75,1888	0/0:14,0:14:42.13:0,42,1056	0/0:22,0:21:60.19:0,60,1464	0/1:21,3:24:98.63:99,0,1505	0/0:20,0:20:54.18:0,54,1381	0/0:6,0:6:18.06:0,18,417
chr10	84126656	.	TCAAA	T	1283.07	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.929;DP=564;FS=0.780;HRun=0;HaplotypeScore=91.5965;InbreedingCoeff=0.9412;MQ=79.63;MQ0=0;MQRankSum=-1.385;QD=51.32;ReadPosRankSum=0.559;VQSLOD=4.1340;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.16:0,51,1340	0/0:9,0:9:27.09:0,27,719	0/0:16,0:16:45.15:0,45,1041	0/0:11,0:11:23.99:0,24,442	0/0:32,0:32:93.30:0,93,2487	0/0:20,0:20:57.20:0,57,1561	0/0:16,0:16:48.16:0,48,1308	0/0:25,0:25:72.23:0,72,1814	0/0:20,0:20:60.20:0,60,1587	0/0:31,0:31:87.30:0,87,2362	0/0:24,0:24:65.91:0,66,1771	0/0:25,0:25:75.26:0,75,2006	0/0:25,0:25:75.26:0,75,2016	0/0:20,0:20:60.21:0,60,1635	0/0:24,0:24:69.24:0,69,1892	0/0:14,0:14:42.14:0,42,1150	0/0:22,0:22:66.23:0,66,1808	0/0:9,0:9:27.09:0,27,698	0/0:19,0:19:54.19:0,54,1474	0/0:25,0:25:68.80:0,69,1851	0/0:29,0:28:87.29:0,87,2312	0/0:26,0:26:72.25:0,72,1966	0/0:30,0:30:87.18:0,87,2246	0/0:11,0:11:33.11:0,33,895	0/0:14,0:14:42.14:0,42,1144	1/1:0,22:22:66.23:1279,66,0	0/0:25,0:25:75.26:0,75,2033	1/1:0,3:3:6.02:116,6,0
chr10	84126940	.	AC	A	2068.81	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.841;DP=536;FS=0.430;HRun=9;HaplotypeScore=61.6934;InbreedingCoeff=0.9813;MQ=68.28;MQ0=5;MQRankSum=1.641;QD=17.68;ReadPosRankSum=0.731;VQSLOD=3.6783;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:53.92:0,54,579	1/1:0,6:6:18.01:165,18,0	0/0:35,0:20:32.86:0,33,264	0/0:24,0:12:11.57:0,12,74	0/0:27,0:27:75.17:0,75,824	0/0:23,0:23:30.63:0,31,491	0/0:17,0:17:48.13:0,48,543	0/0:27,0:27:45.10:0,45,486	0/0:18,0:18:54.10:0,54,572	1/1:5,25:30:77.14:657,77,0	1/1:4,18:22:53.89:468,54,0	0/0:11,0:11:33.03:0,33,343	0/0:16,0:16:13.50:0,14,377	0/0:11,0:11:27.07:0,27,301	0/0:17,0:16:23.56:0,24,147	1/1:3,20:23:51.03:467,51,0	1/1:4,20:24:50.24:446,50,0	0/0:14,0:14:17.43:0,17,174	0/0:19,0:18:41.15:0,41,449	0/0:28,0:28:64.71:0,65,706	0/0:14,0:14:39.10:0,39,440	0/0:16,0:16:23:0,23,389	0/0:19,0:19:47.84:0,48,502	0/0:10,0:10:27.08:0,27,311	1/1:0,0:12:18.33:54,18,0	0/0:9,0:9:24.07:0,24,275	0/0:20,1:21:26.67:0,27,519	0/0:19,0:19:42.12:0,42,484
chr10	84126957	.	AC	A	449.88	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.527;DP=542;FS=0.000;HRun=1;HaplotypeScore=62.9428;InbreedingCoeff=0.9611;MQ=68.59;MQ0=5;MQRankSum=-1.517;QD=11.25;ReadPosRankSum=0.682;VQSLOD=1.4984;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.15:0,54,698	0/0:9,0:9:26.15:0,26,226	0/0:35,2:15:10.28:0,10,281	0/0:21,2:14:13.60:0,14,180	0/0:29,0:29:84.22:0,84,1052	0/0:19,0:19:54.16:0,54,689	0/0:18,0:18:54.09:0,54,692	0/0:17,0:17:48.08:0,48,581	0/0:18,0:18:54.13:0,54,664	0/0:24,0:24:68.69:0,69,666	0/0:20,0:20:58.61:0,59,461	0/0:12,0:12:36.12:0,36,476	0/0:18,0:18:51.06:0,51,602	0/0:10,0:10:30.09:0,30,383	1/1:2,22:24:20.48:283,20,0	0/0:20,0:20:56.79:0,57,465	0/0:26,0:26:57.56:0,58,475	1/1:3,13:16:22.13:286,22,0	0/0:19,0:18:51.08:0,51,594	0/0:30,0:30:88.25:0,88,1046	0/0:18,0:18:48:0,48,526	0/0:18,0:18:27.27:0,27,619	0/0:20,0:20:60.16:0,60,749	0/0:14,0:14:42.05:0,42,486	0/0:15,0:15:45.01:0,45,502	0/0:16,0:16:44.93:0,45,511	0/0:18,0:18:54.14:0,54,683	0/0:15,0:15:45.15:0,45,592
chr10	84127246	.	TCTTCCTTCCTTCCTTC	T	2949.37	PASS	AB=0.899;AC=22;AF=0.423;AN=52;BaseQRankSum=2.791;DP=528;FS=0.680;HRun=0;HaplotypeScore=214.6028;InbreedingCoeff=0.4764;MQ=59.67;MQ0=9;MQRankSum=-2.299;QD=11.61;ReadPosRankSum=-0.706;VQSLOD=2.5370;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:25:99:141,0,99	0/0:4,0:5:2.74:0,3,12	./.	./.	0/0:19,0:19:0.47:0,0,1	0/0:16,0:18:15.05:0,15,351	0/1:24,0:24:51.13:51,0,90	0/0:22,0:22:3.01:0,3,37	0/0:6,0:16:30.10:0,30,537	1/1:10,10:20:14.76:291,15,0	1/1:8,7:15:9.03:277,9,0	0/0:9,0:15:11.72:0,12,365	0/0:10,0:20:21.07:0,21,360	0/0:10,0:19:27.08:0,27,972	1/1:14,0:29:12.04:375,12,0	1/1:7,9:16:15.05:622,15,0	0/1:22,0:35:40.83:109,0,41	1/1:8,0:8:3.48:93,3,0	1/1:22,0:19:0.22:27,0,0	0/0:10,0:14:12.03:0,12,139	0/0:24,0:23:12.50:0,13,87	0/0:9,0:11:9.03:0,9,339	0/0:6,0:7:9.03:0,9,319	0/0:24,0:27:33.11:0,33,1232	0/1:15,0:16:29.26:221,0,29	1/1:11,8:19:21.06:546,21,0	1/1:11,0:18:15.04:253,15,0	1/1:7,0:7:5.98:121,6,0
chr10	84127292	.	T	TC	181.11	PASS	AB=0.928;AC=6;AF=0.107;AN=56;BaseQRankSum=5.614;DP=469;FS=3.229;HRun=2;HaplotypeScore=79.4733;InbreedingCoeff=-0.1384;MQ=51.25;MQ0=17;MQRankSum=-3.751;QD=2.11;ReadPosRankSum=0.923;VQSLOD=-0.7267;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:65.70:0,66,792	0/0:3,0:2:6.02:0,6,84	0/0:24,0:4:9.03:0,9,122	0/0:29,0:4:9.01:0,9,102	0/0:8,0:8:24.08:0,24,333	0/0:15,0:14:26.06:0,26,383	0/0:17,0:17:10.71:0,11,504	0/0:18,0:15:45.15:0,45,623	0/0:18,0:18:44.07:0,44,410	0/0:20,0:19:6.54:0,7,585	0/1:13,0:13:49.89:50,0,266	0/0:19,0:19:41.84:0,42,508	0/0:16,0:16:29.58:0,30,300	0/0:19,0:19:38.84:0,39,429	0/1:19,0:18:14.20:14,0,154	0/1:19,0:19:54.67:55,0,392	0/0:33,0:33:59.43:0,59,684	0/0:11,0:11:26.75:0,27,376	0/0:20,0:16:48.16:0,48,655	0/0:15,0:15:42.14:0,42,582	0/0:19,0:18:48.01:0,48,579	0/0:4,0:4:11.97:0,12,143	0/0:8,0:8:24.01:0,24,311	0/0:29,0:28:84:0,84,1029	0/0:11,0:11:1.31:0,1,261	0/1:13,0:13:99:124,0,308	0/1:16,1:17:2.95:3,0,311	0/1:2,3:5:52.56:53,0,69
chr10	84127322	.	TTCTC	T	614.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.867;DP=613;FS=10.618;HRun=0;HaplotypeScore=118.2367;InbreedingCoeff=0.8988;MQ=55.43;MQ0=15;MQRankSum=0.650;QD=29.24;ReadPosRankSum=1.372;VQSLOD=3.1984;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:66.92:0,67,1230	0/0:5,0:4:11.96:0,12,211	0/0:55,0:15:10.81:0,11,490	0/0:63,0:17:36.61:0,37,585	0/0:16,0:16:45.13:0,45,1038	0/0:14,0:14:39.05:0,39,828	0/0:14,0:14:39.11:0,39,876	0/0:30,0:29:59:0,59,1276	0/0:19,0:19:38.96:0,39,742	0/0:30,0:30:83.93:0,84,1847	0/0:19,0:19:38.71:0,39,764	0/0:17,0:17:42.10:0,42,891	0/0:19,0:19:36.06:0,36,863	0/0:18,0:18:32.56:0,33,676	0/0:23,0:23:38.94:0,39,787	0/0:21,0:21:40.70:0,41,835	0/0:33,0:33:67.99:0,68,1580	0/0:14,0:14:27.64:0,28,833	0/0:22,0:22:54.16:0,54,1196	0/0:21,0:21:59.66:0,60,1199	0/0:16,0:16:35.25:0,35,813	0/0:6,0:6:12.04:0,12,298	0/0:14,0:14:39.10:0,39,889	0/0:29,0:29:78.25:0,78,1916	1/1:1,20:20:42.10:709,42,0	0/0:15,0:15:33.05:0,33,713	0/0:19,0:19:45.09:0,45,1065	0/0:6,0:6:18.06:0,18,416
chr10	84127372	.	A	AT	481.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.805;DP=599;FS=2.578;HRun=10;HaplotypeScore=68.3979;InbreedingCoeff=0.7140;MQ=74.48;MQ0=6;MQRankSum=-0.837;QD=16.03;ReadPosRankSum=-0.432;VQSLOD=3.9517;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:30:54.14:576,54,0	0/0:7,0:7:17.96:0,18,145	0/0:34,0:24:18.11:0,18,228	0/0:32,0:17:2.63:0,3,67	0/0:37,1:38:92.87:0,93,763	0/0:15,0:15:34.98:0,35,277	0/0:20,1:21:18.96:0,19,362	0/0:30,0:30:62.59:0,63,502	0/0:14,1:15:6.98:0,7,263	0/0:31,0:31:71.88:0,72,590	0/0:22,0:22:62.91:0,63,517	0/0:8,0:8:14.01:0,14,104	0/0:15,0:15:38.95:0,39,320	0/0:19,0:19:47.84:0,48,386	0/0:21,1:22:21.91:0,22,384	0/0:15,1:16:12.97:0,13,307	0/0:28,0:28:80.84:0,81,655	0/0:12,0:13:34.97:0,35,273	0/0:25,1:27:32.91:0,33,464	0/0:22,0:23:49.92:0,50,397	0/0:12,0:12:26.95:0,27,222	0/0:18,0:19:43.95:0,44,351	0/0:22,0:22:59.86:0,60,484	0/0:26,0:27:67.86:0,68,540	0/0:22,0:22:38.93:0,39,320	0/0:16,0:16:10.54:0,11,222	0/0:21,0:21:26.82:0,27,364	0/0:10,0:10:23.94:0,24,197
chr10	84127518	.	C	CT	2539.24	PASS	AB=0.690;AC=20;AF=0.357;AN=56;BaseQRankSum=-6.031;DP=526;FS=5.456;HRun=15;HaplotypeScore=68.9863;InbreedingCoeff=0.5778;MQ=63.68;MQ0=2;MQRankSum=0.043;QD=9.37;ReadPosRankSum=-2.083;VQSLOD=2.4048;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,23:38:3.20:291,0,3	0/0:7,0:7:8.76:0,9,54	0/0:18,0:12:12.34:0,12,59	0/1:12,0:7:7.46:7,0,21	0/0:19,1:22:5.17:0,5,130	0/0:17,0:18:15.01:0,15,147	1/1:3,7:10:5.96:157,6,0	1/1:13,17:34:32.79:409,33,0	0/0:12,0:12:21.33:0,21,127	0/0:15,0:16:19.61:0,20,114	0/0:20,1:22:8.86:0,9,159	0/0:17,0:18:25.33:0,25,149	0/0:18,0:18:27.73:0,28,189	0/0:20,0:20:23.07:0,23,143	0/1:6,11:17:12.09:121,0,12	0/0:14,0:14:23.47:0,23,144	0/0:23,1:25:23.47:0,23,244	0/1:8,10:18:3.22:183,0,3	1/1:9,19:34:73.76:531,74,0	1/1:9,14:23:26.78:310,27,0	1/1:5,3:10:17.65:125,18,0	0/0:8,0:8:17.10:0,17,106	0/0:17,0:19:28.25:0,28,165	0/0:16,0:17:31.25:0,31,184	0/1:10,13:24:0.64:181,0,1	0/1:11,12:23:36.39:153,0,36	1/1:11,8:19:20.75:176,21,0	1/1:2,4:7:11.83:90,12,0
chr10	84127759	.	TTTG	T	493.34	PASS	AB=0.924;AC=11;AF=0.204;AN=54;BaseQRankSum=1.955;DP=424;FS=6.479;HRun=0;HaplotypeScore=88.0579;InbreedingCoeff=-0.1313;MQ=37.28;MQ0=33;MQRankSum=-1.957;QD=3.95;ReadPosRankSum=-5.672;VQSLOD=-0.6739;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:8:5.96:6,0,94	0/1:3,3:6:33.94:39,0,34	0/0:35,0:6:5.50:0,5,44	0/0:48,0:5:4.10:0,4,51	0/0:21,0:21:43.12:0,43,741	0/0:15,0:13:32.99:0,33,531	0/1:6,0:6:5.85:6,0,81	0/1:11,0:9:0.94:1,0,106	0/0:13,0:13:35.95:0,36,552	0/1:20,4:20:99:202,0,157	0/1:19,2:21:76.71:77,0,226	0/0:10,0:9:21.05:0,21,374	0/0:9,0:9:24.07:0,24,385	0/0:11,0:11:12.89:0,13,449	0/0:10,0:8:8.46:0,8,156	0/0:7,1:4:5.20:0,5,58	0/1:12,2:13:16.85:257,0,17	1/1:6,0:3:1.36:4,1,0	0/0:15,0:9:21.82:0,22,217	0/0:32,0:31:12.78:0,13,475	0/0:5,0:3:9.03:0,9,156	0/0:8,0:8:15.05:0,15,297	0/0:17,0:17:8.19:0,8,406	0/0:16,0:16:32.86:0,33,537	./.	0/0:25,0:22:52.22:0,52,896	0/1:20,0:14:16.88:17,0,207	0/1:7,0:7:13.24:13,0,103
chr10	84127762	.	G	GT	970.16	PASS	AB=1.000;AC=22;AF=0.423;AN=52;BaseQRankSum=-1.118;DP=404;FS=23.526;HRun=9;HaplotypeScore=74.0285;InbreedingCoeff=0.6223;MQ=38.63;MQ0=29;MQRankSum=-5.922;QD=5.51;ReadPosRankSum=-1.832;VQSLOD=-0.2493;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:7:2.80:13,3,0	0/0:6,0:6:0.83:0,1,2	0/0:28,0:6:2.78:0,3,25	0/0:42,0:4:2.86:0,3,25	0/0:20,1:21:29.67:0,30,260	0/0:16,0:15:26.94:0,27,230	1/1:3,3:6:9.02:98,9,0	1/1:6,4:8:14.87:147,15,0	0/0:13,0:13:20.76:0,21,182	0/1:23,0:19:1.14:21,0,1	1/1:18,0:20:6.27:34,6,0	0/0:11,0:10:14.98:0,15,130	0/0:8,0:8:17.95:0,18,156	0/0:12,0:12:26.98:0,27,231	1/1:3,5:7:8.86:81,9,0	0/1:7,0:3:0:0,0,0	0/1:12,0:11:3.23:9,0,3	./.	1/1:14,3:11:12.03:133,12,0	1/1:12,18:29:32.13:447,32,0	1/1:4,0:3:2.97:20,3,0	0/0:8,0:8:11.99:0,12,104	0/0:17,0:17:23.82:0,24,202	0/0:16,0:16:26.64:0,27,234	./.	0/0:24,0:21:41.66:0,42,361	1/1:14,6:14:12.03:132,12,0	0/1:7,0:7:11.54:12,0,20
chr10	84127845	.	C	CT	210.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.230;DP=458;FS=8.579;HRun=0;HaplotypeScore=45.1632;InbreedingCoeff=0.9418;MQ=64.53;MQ0=5;MQRankSum=-3.401;QD=19.11;ReadPosRankSum=-0.343;VQSLOD=4.9674;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.21:0,69,942	0/0:7,0:7:18.02:0,18,228	0/0:9,0:8:18.06:0,18,239	0/0:15,0:8:21.04:0,21,273	0/0:24,0:24:66.14:0,66,881	0/0:33,0:33:84.24:0,84,1122	0/0:11,0:11:27.09:0,27,377	0/0:25,0:23:66.14:0,66,860	0/0:8,0:8:24.06:0,24,317	0/0:18,0:17:51.17:0,51,705	0/0:21,0:21:60.20:0,60,839	0/0:15,0:15:45.14:0,45,610	0/0:13,0:13:36.12:0,36,501	0/0:14,0:14:39.13:0,39,545	0/0:17,0:17:51.17:0,51,713	0/0:10,0:10:27.09:0,27,377	0/0:23,0:22:60.19:0,60,821	0/0:11,0:11:27.07:0,27,358	0/0:16,0:15:45.13:0,45,599	0/0:26,0:26:72.24:0,72,1004	0/0:14,0:14:39.13:0,39,545	0/0:9,0:9:27.09:0,27,377	0/0:18,0:18:54.17:0,54,737	0/0:15,0:15:42.14:0,42,580	1/1:0,11:11:21:302,21,0	0/0:22,0:21:63.20:0,63,864	0/0:23,0:21:63.17:0,63,828	0/0:4,0:4:12.04:0,12,167
chr10	84128857	.	G	GA	840.55	PASS	AB=0.811;AC=10;AF=0.185;AN=54;BaseQRankSum=-2.976;DP=443;FS=6.664;HRun=11;HaplotypeScore=61.4567;InbreedingCoeff=0.3946;MQ=49.24;MQ0=26;MQRankSum=-0.065;QD=9.14;ReadPosRankSum=-0.788;VQSLOD=2.1117;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:47.22:0,47,352	1/1:1,4:6:2.05:55,2,0	./.	0/0:4,0:1:0:0,0,0	0/0:21,1:21:38.82:0,39,300	0/0:17,0:16:29.84:0,30,232	0/0:17,0:15:35.83:0,36,275	0/0:24,0:24:56.71:0,57,437	0/0:10,0:11:21.98:0,22,151	1/1:5,14:19:36.02:350,36,0	1/1:6,10:13:27.90:265,28,0	0/1:14,0:12:19.48:19,0,41	0/0:8,0:8:11.93:0,12,93	0/1:8,0:7:15.29:15,0,78	0/0:24,0:22:46.84:0,47,354	0/1:4,6:10:45.65:128,0,46	0/1:7,11:18:22.42:157,0,22	0/0:22,1:20:0.10:0,0,166	0/0:11,0:10:22:0,22,149	0/0:21,1:21:11.31:0,11,266	0/0:17,0:16:29.85:0,30,232	0/0:12,0:11:17.88:0,18,138	0/0:23,0:22:23.75:0,24,185	0/0:9,0:9:18.94:0,19,125	0/0:13,0:14:22.94:0,23,168	0/0:17,0:15:25.92:0,26,191	0/0:23,0:20:41.78:0,42,324	0/0:6,0:4:11.95:0,12,93
chr10	84128873	.	C	CA	593.26	PASS	AB=0.946;AC=5;AF=0.089;AN=56;BaseQRankSum=-4.627;DP=444;FS=1.598;HRun=10;HaplotypeScore=52.1863;InbreedingCoeff=0.3115;MQ=60.83;MQ0=13;MQRankSum=0.622;QD=8.24;ReadPosRankSum=1.156;VQSLOD=1.4798;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:27:63.16:671,63,0	0/0:6,0:6:14.97:0,15,122	0/1:10,0:4:9.77:10,0,36	0/0:9,0:4:2.62:0,3,18	0/1:20,2:22:20.06:20,0,251	0/0:17,0:16:38.93:0,39,318	0/0:17,0:17:44.93:0,45,369	0/0:32,0:32:44.89:0,45,465	0/0:13,0:13:32.94:0,33,270	0/0:19,0:19:50.92:0,51,415	0/0:15,0:14:29.91:0,30,239	0/0:12,0:9:23.96:0,24,194	0/0:11,0:11:23.94:0,24,194	0/0:9,0:9:20.92:0,21,167	0/0:22,0:20:41.92:0,42,342	0/0:9,0:9:20.92:0,21,167	0/0:19,1:20:24.81:0,25,315	0/0:21,0:19:38.89:0,39,315	0/0:19,1:18:44.94:0,45,369	0/0:19,1:19:15.94:0,16,333	0/0:15,0:14:32.96:0,33,271	0/0:11,0:10:20.85:0,21,163	0/0:15,0:16:14.65:0,15,123	0/0:11,0:11:23.97:0,24,197	0/1:10,1:11:11.03:11,0,127	0/0:14,0:13:29.95:0,30,246	0/0:22,0:19:41.14:0,41,323	0/0:8,0:6:14.98:0,15,123
chr10	84129786	.	AT	A	687.20	PASS	AB=0.846;AC=15;AF=0.268;AN=56;BaseQRankSum=-1.940;DP=570;FS=2.856;HRun=15;HaplotypeScore=90.7332;InbreedingCoeff=0.1960;MQ=64.49;MQ0=6;MQRankSum=0.279;QD=2.92;ReadPosRankSum=0.120;VQSLOD=0.4580;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:30:51.25:0,51,279	0/0:5,0:13:19.18:0,19,125	0/0:19,0:12:5.99:0,6,50	0/1:16,0:12:8.01:8,0,34	0/0:15,0:15:27.47:0,27,238	0/1:14,2:17:8.93:9,0,147	1/1:7,4:16:19.17:99,19,0	1/1:16,12:30:9.25:176,9,0	0/1:18,0:20:2.48:2,0,216	0/0:12,0:26:52.77:0,53,325	0/0:12,1:15:7.41:0,7,117	0/1:18,0:19:5.72:6,0,181	0/0:27,0:27:10.68:0,11,283	0/1:17,1:18:0.54:1,0,175	0/1:19,3:22:8.99:9,0,280	0/0:11,0:29:60.13:0,60,330	0/0:14,1:21:23.73:0,24,222	0/0:18,1:22:31.56:0,32,388	0/1:16,6:21:26.21:107,0,26	0/1:4,8:12:21.96:115,0,22	1/1:4,11:15:9.14:185,9,0	0/0:22,0:23:38.16:0,38,348	0/0:24,0:23:41.97:0,42,363	0/0:18,0:18:7.77:0,8,186	0/0:15,0:15:20.97:0,21,117	0/0:16,0:19:15.26:0,15,216	0/1:10,12:24:26.45:128,0,26	0/0:13,0:12:23.68:0,24,187
chr10	84131173	.	GC	G	10462.18	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=12.740;DP=733;FS=2.302;HRun=3;HaplotypeScore=73.1246;InbreedingCoeff=0.9983;MQ=87.01;MQ0=0;MQRankSum=-1.564;QD=34.30;ReadPosRankSum=0.794;VQSLOD=5.4190;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,187,2641	1/1:0,9:9:21.07:260,21,0	0/0:23,0:23:66.20:0,66,913	0/0:35,1:35:92.88:0,93,1266	0/0:14,0:14:36.12:0,36,517	0/0:16,0:16:48.15:0,48,672	1/1:1,18:19:54.17:669,54,0	1/1:3,35:38:99:1289,105,0	0/0:12,0:12:36.12:0,36,512	1/1:0,22:22:63.20:780,63,0	1/1:0,18:18:51.16:632,51,0	0/0:29,0:29:84.28:0,84,1209	0/0:27,0:27:81.27:0,81,1161	0/0:26,0:26:75.25:0,75,1071	0/0:31,0:31:93.31:0,93,1338	1/1:0,29:29:75.24:930,75,0	1/1:1,34:35:99:1264,102,0	0/0:26,0:26:78.26:0,78,1123	1/1:0,19:19:57.17:696,57,0	1/1:0,27:27:81.25:1002,81,0	1/1:1,35:36:99:1227,99,0	0/0:34,0:34:99:0,99,1423	0/0:20,0:20:57.16:0,57,800	0/0:30,0:30:87.29:0,87,1251	1/1:1,27:28:75.24:930,75,0	0/0:34,1:35:68.12:0,68,1396	1/1:1,24:25:63.20:781,63,0	0/0:6,0:6:18.06:0,18,259
chr10	84131335	.	G	GCC	2795.68	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=4.949;DP=598;FS=6.310;HRun=7;HaplotypeScore=81.0075;InbreedingCoeff=0.9532;MQ=71.49;MQ0=2;MQRankSum=-0.127;QD=13.64;ReadPosRankSum=-3.821;VQSLOD=-0.1067;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:96.23:0,96,1093	0/0:13,0:13:35.92:0,36,387	0/0:18,0:17:17.16:0,17,210	0/0:21,0:19:23.89:0,24,306	0/0:20,0:20:47.19:0,47,528	0/0:19,0:19:45.06:0,45,481	1/1:6,1:20:8.81:97,9,0	1/1:9,26:35:78.04:1025,78,0	0/0:21,0:21:57.09:0,57,626	0/0:21,0:21:60.13:0,60,658	0/0:16,0:16:39.09:0,39,444	0/0:21,0:21:51.10:0,51,583	0/0:21,0:21:48.08:0,48,532	0/0:21,0:21:57.16:0,57,662	1/1:4,0:14:12.02:115,12,0	0/0:33,0:33:87.19:0,87,971	0/0:34,0:33:90.22:0,90,1034	1/1:4,2:19:26.97:291,27,0	1/1:16,4:20:23.95:236,24,0	1/1:4,7:12:6.49:98,6,0	1/1:10,23:37:34.74:402,35,0	0/0:19,0:19:45.09:0,45,502	0/0:12,0:12:36.11:0,36,419	0/0:27,0:27:78.18:0,78,874	0/0:17,0:17:45.13:0,45,521	1/1:4,1:19:44.60:323,45,0	1/1:1,19:22:27.01:382,27,0	1/1:0,0:3:5.92:39,6,0
chr10	84132365	.	C	CT	1104.52	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.766;DP=557;FS=5.039;HRun=1;HaplotypeScore=51.0839;InbreedingCoeff=0.9663;MQ=82.31;MQ0=0;MQRankSum=-3.217;QD=42.48;ReadPosRankSum=2.479;VQSLOD=3.9233;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.17:0,51,709	0/0:8,0:8:24.08:0,24,336	0/0:18,0:18:48.15:0,48,623	0/0:14,0:14:38.85:0,39,465	0/0:26,0:26:78.26:0,78,1091	0/0:28,0:28:81.27:0,81,1131	0/0:18,0:18:54.17:0,54,737	0/0:34,0:34:99:0,102,1411	0/0:21,0:21:60.20:0,60,839	0/0:24,0:24:72.24:0,72,993	0/0:8,0:8:24.08:0,24,335	0/0:19,0:19:57.19:0,57,796	0/0:31,0:31:93.31:0,93,1295	0/0:20,0:20:60.20:0,60,839	0/0:19,0:19:57.19:0,57,795	0/0:19,0:19:57.19:0,57,793	0/0:25,0:25:75.21:0,75,1011	0/0:13,0:13:36.10:0,36,484	0/0:24,0:24:72.23:0,72,990	0/0:29,0:29:84.28:0,84,1172	0/0:18,0:18:54.17:0,54,738	0/0:17,0:17:51.17:0,51,712	0/0:22,0:22:66.22:0,66,923	0/0:13,0:13:39.09:0,39,523	1/1:0,26:26:75.26:1199,75,0	0/0:20,0:20:57.19:0,57,797	0/0:22,0:22:66.22:0,66,923	0/0:4,0:4:12.04:0,12,168
chr10	84132736	.	CTG	C	1900.05	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.251;DP=740;FS=1.214;HRun=0;HaplotypeScore=85.3745;InbreedingCoeff=0.9480;MQ=90.15;MQ0=0;MQRankSum=-3.706;QD=40.43;ReadPosRankSum=0.875;VQSLOD=5.6016;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1899	0/0:10,0:10:27.09:0,27,519	0/0:27,0:27:78.26:0,78,1445	0/0:31,0:31:71.57:0,72,1428	0/0:34,0:34:99:0,102,1953	0/0:22,0:21:60.21:0,60,1133	0/0:25,0:25:69.24:0,69,1333	0/0:32,0:32:93.31:0,93,1737	0/0:29,0:29:81.28:0,81,1552	0/0:22,0:22:63.22:0,63,1200	0/0:27,0:27:81.28:0,81,1565	0/0:19,0:19:57.20:0,57,1101	0/0:30,0:30:87.30:0,87,1638	0/0:31,0:31:93.32:0,93,1784	1/1:0,34:34:96.33:1470,96,0	0/0:44,0:44:99:0,132,2528	0/0:15,0:15:45.15:0,45,869	1/1:0,13:13:36.12:551,36,0	0/0:38,0:38:99:0,114,2178	0/0:31,0:31:93.32:0,93,1793	0/0:30,0:30:87.30:0,87,1681	0/0:29,0:29:81.28:0,81,1544	0/0:24,0:24:72.25:0,72,1386	0/0:21,0:21:63.22:0,63,1217	0/0:24,0:24:72.24:0,72,1346	0/0:24,0:24:69.24:0,69,1333	0/0:39,0:39:99:0,117,2236	0/0:2,0:2:6.02:0,6,116
chr10	84133095	.	T	TTATAG	1033.66	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=-2.632;DP=519;FS=0.000;HRun=0;HaplotypeScore=98.5320;InbreedingCoeff=0.4594;MQ=71.13;MQ0=0;MQRankSum=-0.478;QD=32.30;ReadPosRankSum=-0.176;VQSLOD=2.8814;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:78.23:0,78,1530	0/0:6,0:6:18.06:0,18,373	0/1:9,0:9:2.95:3,0,141	0/1:6,0:6:33.55:34,0,69	0/0:18,0:18:48.15:0,48,957	0/0:24,0:24:69.19:0,69,1318	0/0:15,0:15:36.12:0,36,720	0/0:36,0:35:90.29:0,90,1754	0/0:14,0:14:39.10:0,39,767	0/0:23,0:23:54.18:0,54,1082	0/0:27,0:27:72.25:0,72,1487	0/0:13,0:13:36.09:0,36,670	0/0:20,0:20:57.20:0,57,1181	0/0:17,0:17:51.18:0,51,1057	0/0:19,0:19:51.16:0,51,1020	0/0:22,0:22:57.20:0,57,1171	0/0:33,0:33:96.33:0,96,1989	0/0:10,0:10:30.10:0,30,622	0/0:24,0:24:60.20:0,60,1186	0/0:20,0:20:57.18:0,57,1143	0/0:25,0:25:69.24:0,69,1413	0/0:14,0:14:36.12:0,36,746	0/0:21,0:21:42.14:0,42,843	0/0:11,0:11:33.11:0,33,679	1/1:4,13:17:36.12:1105,36,0	0/0:21,0:21:57.18:0,57,1145	0/0:20,0:20:54.17:0,54,1063	0/0:2,0:2:3.01:0,3,62
chr10	84133953	.	T	TA	6014	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-7.829;DP=619;FS=2.206;HRun=12;HaplotypeScore=70.2337;InbreedingCoeff=0.8695;MQ=78.26;MQ0=0;MQRankSum=0.218;QD=15.38;ReadPosRankSum=-1.444;VQSLOD=5.3003;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,11:20:24.66:246,25,0	1/1:2,9:11:24.04:234,24,0	0/0:38,1:27:1.60:0,2,165	0/1:28,0:19:6.22:6,0,53	0/0:33,0:33:71.43:0,71,518	0/0:27,0:27:32.96:0,33,359	1/1:3,10:14:10.98:255,11,0	1/1:8,20:28:60:551,60,0	0/0:18,0:18:25.68:0,26,172	1/1:5,31:36:80.96:726,81,0	1/1:8,10:19:24.93:258,25,0	0/0:12,0:12:29.77:0,30,213	0/0:17,0:17:33.68:0,34,243	0/0:18,0:19:43.40:0,43,300	1/1:1,14:15:30.04:286,30,0	1/1:8,11:21:10.82:240,11,0	1/1:5,11:16:4.84:199,5,0	1/1:2,8:10:12.02:117,12,0	1/1:8,22:31:44.42:513,44,0	1/1:7,30:37:57.23:661,57,0	1/1:3,6:9:18.03:175,18,0	0/0:26,0:26:50.23:0,50,361	0/0:23,0:23:56.64:0,57,414	0/0:13,0:13:32.74:0,33,237	1/1:3,1:21:37.21:200,37,0	1/1:6,28:34:45.54:610,46,0	1/1:4,29:33:59.78:575,60,0	1/1:2,5:7:17.95:163,18,0
chr10	84135766	.	C	CT	522.76	PASS	AB=0.918;AC=13;AF=0.232;AN=56;BaseQRankSum=0.965;DP=489;FS=4.090;HRun=12;HaplotypeScore=82.3204;InbreedingCoeff=0.5681;MQ=45.99;MQ0=55;MQRankSum=-2.624;QD=3.21;ReadPosRankSum=2.635;VQSLOD=0.2375;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,1:14:18.93:134,19,0	1/1:1,0:1:3:29,3,0	0/1:73,0:19:14.38:14,0,27	0/0:67,0:16:9.38:0,9,56	0/0:27,0:29:29.80:0,30,267	0/0:10,0:11:20.60:0,21,124	0/0:16,0:14:10.39:0,10,62	0/0:13,0:10:11.91:0,12,86	0/0:17,0:16:18.13:0,18,119	1/1:11,2:13:15.76:88,16,0	0/1:18,4:22:18.77:164,0,19	0/0:5,0:5:8.84:0,9,48	0/0:13,0:12:23.53:0,24,153	0/0:5,0:5:6.44:0,6,44	0/0:15,0:14:18.60:0,19,121	0/1:9,1:10:5.16:93,0,5	1/1:16,2:15:10.98:85,11,0	0/0:8,0:7:16.66:0,17,101	0/0:19,0:16:24.95:0,25,153	0/0:23,0:23:48.57:0,49,307	0/0:5,0:5:11.76:0,12,78	0/0:2,0:3:0.47:0,0,4	0/0:11,0:10:13.77:0,14,82	0/0:6,0:5:5.92:0,6,42	1/1:10,1:10:12.28:84,12,0	0/0:16,0:15:14.64:0,15,125	0/0:17,0:17:29.74:0,30,179	0/0:22,0:11:10.23:0,10,125
chr10	84136505	.	AT	A	5856.46	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.480;DP=424;FS=1.286;HRun=1;HaplotypeScore=40.6525;InbreedingCoeff=0.9855;MQ=75.54;MQ0=0;MQRankSum=-0.564;QD=40.67;ReadPosRankSum=0.200;VQSLOD=4.8724;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.16:0,48,767	0/0:6,0:6:18.06:0,18,288	0/0:12,0:11:16.60:0,17,457	0/0:14,0:14:27.87:0,28,455	0/0:31,0:31:93.30:0,93,1464	0/0:18,0:18:54.18:0,54,856	1/1:0,8:8:21.07:294,21,0	1/1:0,29:29:87.28:1199,87,0	0/0:7,0:7:21.06:0,21,313	0/0:14,0:14:42.13:0,42,647	0/0:21,0:21:60.19:0,60,936	0/0:15,0:15:42.14:0,42,663	0/0:11,0:11:33.10:0,33,498	0/0:10,0:10:30.10:0,30,480	1/1:0,10:10:30.10:419,30,0	0/0:5,0:5:15.04:0,15,209	0/0:26,0:26:78.27:0,78,1241	1/1:0,27:27:81.27:1131,81,0	1/1:0,25:25:75.23:1017,75,0	1/1:0,18:18:51.17:706,51,0	1/1:0,8:8:24.08:336,24,0	0/0:6,0:6:18.06:0,18,281	0/0:5,0:5:15.05:0,15,232	0/0:5,0:5:15.05:0,15,240	0/0:21,0:21:63.19:0,63,982	0/0:21,0:21:63.21:0,63,998	1/1:0,19:19:54.18:754,54,0	0/0:15,0:15:45.14:0,45,696
chr10	84137742	.	T	TA	193.78	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.575;DP=490;FS=21.003;HRun=10;HaplotypeScore=48.3946;InbreedingCoeff=0.7287;MQ=74.40;MQ0=1;MQRankSum=-0.764;QD=16.15;ReadPosRankSum=1.049;VQSLOD=2.3216;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:56.91:0,57,465	0/0:7,0:7:17.98:0,18,148	0/0:11,0:10:3.24:0,3,71	0/0:15,0:13:5.14:0,5,54	0/0:12,0:12:26.94:0,27,218	0/0:36,0:36:95.85:0,96,784	0/0:17,0:17:35.87:0,36,286	0/0:37,0:36:83.86:0,84,689	0/0:15,0:15:32.95:0,33,271	0/0:25,0:25:59.92:0,60,492	0/0:16,0:16:14.94:0,15,271	0/0:16,0:16:44.95:0,45,369	0/0:30,0:30:71.85:0,72,582	0/0:17,0:17:38.94:0,39,320	0/0:21,0:21:49.68:0,50,391	0/0:19,0:19:50.94:0,51,419	0/0:23,0:23:59.91:0,60,492	0/0:8,0:8:14.91:0,15,116	0/0:26,0:26:56.74:0,57,463	0/0:16,0:16:39.40:0,39,319	0/0:6,0:6:17.98:0,18,148	0/0:5,0:5:14.98:0,15,123	0/0:7,0:7:20.98:0,21,172	0/0:16,0:16:41.93:0,42,342	1/1:0,12:12:27.07:288,27,0	0/0:22,0:22:53.90:0,54,437	0/0:20,0:20:53.89:0,54,439	0/0:12,0:12:29.94:0,30,246
chr10	84138139	.	ACT	A	367.70	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.528;DP=442;FS=4.366;HRun=0;HaplotypeScore=50.2432;InbreedingCoeff=0.8818;MQ=74.14;MQ0=0;MQRankSum=-0.529;QD=33.43;ReadPosRankSum=-0.574;VQSLOD=4.6804;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.25:0,72,1292	0/0:4,0:4:12.04:0,12,216	0/0:8,0:8:21.07:0,21,354	0/0:12,0:12:30.06:0,30,486	0/0:20,0:20:60.20:0,60,1055	0/0:13,0:13:39.13:0,39,696	0/0:15,0:15:42.14:0,42,750	0/0:27,0:27:75.24:0,75,1297	0/0:18,0:18:51.16:0,51,889	0/0:11,0:11:33.11:0,33,594	0/0:13,0:13:33.11:0,33,593	0/0:18,0:18:51.17:0,51,918	0/0:17,0:17:51.17:0,51,917	0/0:12,0:12:36.12:0,36,648	0/0:31,0:31:87.27:0,87,1502	0/0:12,0:12:33.11:0,33,594	0/0:23,0:23:69.19:0,69,1172	0/0:4,0:4:9.03:0,9,162	0/0:17,0:17:42.14:0,42,727	0/0:15,0:15:45.15:0,45,800	0/0:20,0:20:51.17:0,51,908	0/0:4,0:4:12.04:0,12,216	0/0:6,0:6:18.06:0,18,324	0/0:22,0:22:63.22:0,63,1128	1/1:0,11:11:33.11:462,33,0	0/0:23,0:23:66.23:0,66,1186	0/0:30,0:30:90.31:0,90,1620	0/0:11,0:11:33.11:0,33,594
chr10	84138627	.	C	CA	944.49	PASS	AB=0.871;AC=13;AF=0.232;AN=56;BaseQRankSum=-5.088;DP=512;FS=1.107;HRun=14;HaplotypeScore=56.5984;InbreedingCoeff=0.5121;MQ=52.70;MQ0=22;MQRankSum=-1.185;QD=7.05;ReadPosRankSum=0.889;VQSLOD=2.3761;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:34:16.05:0,16,325	1/1:0,4:5:5.16:73,5,0	0/0:11,1:6:6.98:0,7,35	0/0:7,0:3:3.51:0,4,19	0/0:21,0:21:38.34:0,38,248	0/0:18,1:20:31.54:0,32,195	0/0:20,1:23:17.02:0,17,227	0/0:29,1:30:39.89:0,40,363	0/0:11,0:12:25.66:0,26,158	1/1:9,11:20:5.58:266,6,0	1/1:4,6:10:20.84:172,21,0	0/0:19,0:19:28.54:0,29,179	0/0:19,0:19:41.07:0,41,260	0/0:14,0:15:20.67:0,21,134	0/0:20,0:21:46.25:0,46,293	1/1:2,9:10:26.99:237,27,0	1/1:16,17:32:2.33:277,2,0	0/0:23,1:25:17.61:0,18,218	0/0:17,1:18:10.90:0,11,179	0/0:11,0:12:22.62:0,23,138	0/1:6,2:8:37.89:38,0,43	0/0:11,1:12:20.60:0,21,134	0/0:13,1:13:0.27:0,0,127	0/1:21,4:23:25.79:26,0,234	0/0:12,0:11:16.65:0,17,102	0/1:18,1:18:17.32:17,0,157	0/0:25,0:24:46.60:0,47,290	0/0:17,0:14:28.58:0,29,179
chr10	84139631	.	C	CCATGGAGGT	2095.70	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.828;DP=689;FS=2.053;HRun=0;HaplotypeScore=181.0275;InbreedingCoeff=0.9509;MQ=83.41;MQ0=0;MQRankSum=-6.139;QD=83.83;ReadPosRankSum=-0.610;VQSLOD=3.8178;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:72.20:0,72,1754	0/0:15,0:15:33.07:0,33,783	0/0:16,0:16:11.22:0,11,324	0/0:26,0:26:26.96:0,27,401	0/0:18,0:18:48.06:0,48,1038	0/0:20,0:20:45.09:0,45,963	0/0:30,0:30:54.18:0,54,1348	0/0:36,0:36:63.15:0,63,1328	0/0:25,0:25:48.11:0,48,1119	0/0:21,0:21:36.12:0,36,923	0/0:15,0:15:30.10:0,30,728	0/0:28,0:28:63.17:0,63,1509	0/0:32,0:32:66.19:0,66,1551	0/0:23,0:23:33.11:0,33,921	0/0:24,0:24:45.13:0,45,1058	0/0:19,0:19:42.13:0,42,1045	0/0:29,0:29:54.16:0,54,1376	0/0:24,0:24:51.10:0,51,1191	0/0:27,0:27:36.10:0,36,847	0/0:18,0:18:42.06:0,42,980	0/0:55,0:55:99:0,102,2754	0/0:16,0:16:24.08:0,24,669	0/0:14,0:14:18.05:0,18,435	0/0:35,0:35:75.20:0,75,1818	1/1:7,15:25:48.16:2191,48,0	0/0:24,0:24:30.10:0,30,837	0/0:22,0:22:48.13:0,48,1210	0/0:10,0:10:24.08:0,24,670
chr10	84139798	.	CT	C	1696.64	PASS	AB=0.836;AC=17;AF=0.304;AN=56;BaseQRankSum=6.383;DP=524;FS=0.000;HRun=14;HaplotypeScore=66.1274;InbreedingCoeff=0.5627;MQ=75.48;MQ0=1;MQRankSum=1.067;QD=8.16;ReadPosRankSum=3.452;VQSLOD=2.7970;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,18:25:23.61:272,0,24	1/1:0,10:11:28.82:191,29,0	0/1:23,0:16:27.15:27,0,91	0/0:12,1:12:11.77:0,12,86	0/0:20,2:24:12.47:0,12,366	0/0:24,1:25:12.38:0,12,418	0/0:12,1:14:12.11:0,12,227	0/0:28,2:31:25.01:0,25,354	0/0:13,0:16:35.86:0,36,315	1/1:4,18:23:55.51:370,56,0	1/1:4,15:20:40.55:268,41,0	0/0:15,2:18:3.71:0,4,304	0/0:17,0:17:48.01:0,48,434	0/0:11,0:11:12.17:0,12,217	0/1:10,2:13:8.43:8,0,198	1/1:1,11:12:29.72:206,30,0	1/1:2,20:23:58.54:396,59,0	0/0:20,0:20:50.52:0,51,444	0/0:13,0:13:26.95:0,27,239	0/1:18,4:23:26.25:26,0,315	0/1:13,2:15:2.14:2,0,262	0/0:12,0:12:29.93:0,30,251	0/0:14,1:17:18.13:0,18,286	0/0:15,1:16:15.43:0,15,277	1/1:2,1:20:37.58:120,38,0	0/0:28,2:31:10.15:0,10,503	0/0:18,1:20:33.10:0,33,413	0/0:13,0:15:26.09:0,26,227
chr10	84140613	.	G	GTTT	763.99	PASS	AB=0.574;AC=17;AF=0.304;AN=56;BaseQRankSum=13.882;DP=588;FS=1.775;HRun=10;HaplotypeScore=105.4544;InbreedingCoeff=0.4306;MQ=74.60;MQ0=0;MQRankSum=-0.206;QD=2.63;ReadPosRankSum=0.244;VQSLOD=-0.7170;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:28:35.98:50,0,36	0/0:10,0:12:29.92:0,30,316	0/0:11,0:10:14.94:0,15,147	0/0:23,0:22:40.81:0,41,451	0/0:21,0:22:51.01:0,51,589	0/0:18,0:19:49.51:0,50,617	0/1:5,0:22:12.20:29,0,12	0/1:8,0:40:30.68:68,0,31	0/0:17,0:17:48.14:0,48,584	0/0:34,0:36:90.11:0,90,1075	0/0:14,0:14:36.09:0,36,438	0/0:13,0:15:45:0,45,509	0/0:22,0:22:63.16:0,63,766	0/0:22,0:22:57.15:0,57,693	0/1:5,0:14:5.57:6,0,58	0/0:20,0:20:48.06:0,48,569	0/0:34,0:35:90.06:0,90,1033	1/1:2,0:22:25.42:76,25,0	1/1:6,0:30:0.34:52,0,0	1/1:6,0:33:33.64:77,34,0	0/1:8,0:20:16.63:17,0,20	0/0:10,0:11:25.40:0,25,311	0/0:14,0:14:33.03:0,33,390	0/0:4,0:4:12.04:0,12,146	1/1:6,10:16:24.04:424,24,0	0/1:7,0:31:0.26:81,0,0	1/1:1,0:22:23.67:55,24,0	0/1:3,0:12:10.16:10,0,24
chr10	84141893	.	CGTGTGTGTGTGTGT	C	2084.67	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=4.126;DP=489;FS=5.738;HRun=0;HaplotypeScore=163.6498;InbreedingCoeff=0.8543;MQ=54.50;MQ0=23;MQRankSum=-4.133;QD=18.61;ReadPosRankSum=1.889;VQSLOD=2.3267;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,16:32:15.05:455,15,0	1/1:2,1:4:7.91:311,8,0	./.	./.	0/0:18,0:27:48.12:0,48,1630	0/0:12,0:11:18.06:0,18,595	0/0:14,0:14:6.02:0,6,119	0/0:22,0:20:33.06:0,33,631	0/0:16,0:17:21.04:0,21,592	1/1:10,5:13:18.05:395,18,0	1/1:3,10:13:12.04:375,12,0	0/0:4,0:13:21.07:0,21,822	0/0:10,0:10:27.09:0,27,1108	0/0:20,0:21:39.12:0,39,1825	0/0:7,0:15:15.05:0,15,735	1/1:7,12:17:6.63:238,7,0	1/1:9,15:21:14.93:480,15,0	0/0:13,0:19:27.09:0,27,972	0/0:11,0:11:18.03:0,18,347	0/0:6,0:14:9.71:0,10,401	0/0:33,0:31:36.12:0,36,1115	0/0:2,0:2:3.01:0,3,103	0/0:14,0:13:18.52:0,19,422	0/0:13,0:28:30.68:0,31,1433	0/0:17,0:20:42.14:0,42,2337	0/0:10,0:15:27.01:0,27,831	0/0:13,0:22:35.14:0,35,1277	0/0:3,0:5:6.02:0,6,322
chr10	84142490	.	A	AG	773.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.174;DP=720;FS=5.176;HRun=7;HaplotypeScore=71.3885;InbreedingCoeff=0.9990;MQ=75.93;MQ0=0;MQRankSum=-2.602;QD=29.73;ReadPosRankSum=0.872;VQSLOD=4.2208;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,111,1139	0/0:11,0:11:30.05:0,30,312	0/0:33,0:33:56.67:0,57,675	0/0:19,0:18:33:0,33,298	0/0:33,0:33:96.18:0,96,989	0/0:23,0:23:69.16:0,69,728	0/0:32,1:33:87.03:0,87,858	0/0:31,0:31:66.16:0,66,709	0/0:24,0:24:69.15:0,69,727	0/0:30,0:30:83.87:0,84,870	0/0:35,0:35:94.12:0,94,999	0/0:24,0:24:66.11:0,66,687	0/0:23,0:23:66.16:0,66,707	0/0:24,0:24:63.14:0,63,668	0/0:29,0:29:78.17:0,78,821	0/0:25,0:25:69.15:0,69,727	0/0:23,0:23:63.16:0,63,677	0/0:16,0:16:33.06:0,33,344	0/0:26,0:26:72.16:0,72,755	0/0:26,0:26:72.17:0,72,764	0/0:36,0:36:90.15:0,90,931	0/0:19,0:19:54.13:0,54,574	0/0:19,0:19:51.12:0,51,547	0/0:24,0:24:72.15:0,72,757	1/1:1,25:26:66.21:868,66,0	0/0:25,0:25:69.17:0,69,737	0/0:24,0:24:66.15:0,66,698	0/0:16,0:16:48.12:0,48,516
chr10	84144561	.	GCTCT	G	30.74	PASS	AB=0.909;AC=3;AF=0.063;AN=48;BaseQRankSum=4.563;DP=430;FS=1.224;HRun=0;HaplotypeScore=77.9506;InbreedingCoeff=-0.0783;MQ=84.66;MQ0=0;MQRankSum=1.888;QD=0.63;ReadPosRankSum=-5.210;VQSLOD=-0.4586;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:6.02:0,6,148	./.	0/0:20,0:20:60.21:0,60,1571	0/0:16,0:16:48.16:0,48,1254	0/0:23,0:23:63.22:0,63,1770	0/0:29,0:27:87.28:0,87,2377	./.	0/0:17,0:17:50.66:0,51,1263	0/0:26,0:26:78.25:0,78,2167	0/0:21,0:21:63.22:0,63,1603	0/0:11,0:11:9.03:0,9,211	0/0:18,0:18:54.19:0,54,1550	0/0:22,0:22:66.23:0,66,1849	0/0:18,0:18:54.19:0,54,1536	./.	0/1:19,0:19:10.92:11,0,119	0/0:9,0:9:12.04:0,12,314	0/0:5,0:5:9.03:0,9,118	0/1:10,6:16:99:102,0,723	0/0:14,0:14:6.30:0,6,230	./.	0/0:15,0:15:39.13:0,39,1128	0/0:22,0:22:60.21:0,60,1735	0/0:15,0:14:39.13:0,39,1114	0/1:14,0:14:5.75:6,0,285	0/0:18,0:18:34.51:0,35,1179	0/0:21,0:21:39.07:0,39,834	0/0:6,0:6:9.50:0,10,203
chr10	84144567	.	A	ATT	568.08	PASS	AB=0.924;AC=10;AF=0.179;AN=56;BaseQRankSum=5.519;DP=428;FS=5.390;HRun=0;HaplotypeScore=250.1450;InbreedingCoeff=-0.1948;MQ=86.16;MQ0=0;MQRankSum=-3.488;QD=3.94;ReadPosRankSum=-2.368;VQSLOD=2.2484;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:6,3:9:10.23:10,0,39	0/0:1,0:1:0:0,0,0	0/0:20,0:20:60.19:0,60,943	0/0:18,0:18:45.13:0,45,676	0/0:22,0:22:57.19:0,57,928	0/0:29,0:28:78.27:0,78,1272	0/0:9,0:9:11.81:0,12,166	0/1:21,0:21:12.49:12,0,449	0/0:26,0:26:78.21:0,78,1218	0/1:17,0:17:99:130,0,115	0/0:9,1:11:1.96:0,2,129	0/0:19,0:19:54.18:0,54,876	0/0:21,0:21:63.19:0,63,1000	0/0:17,0:17:48.16:0,48,780	0/0:11,0:11:12.16:0,12,107	0/1:15,1:16:44.10:44,0,82	0/1:7,1:8:62.11:72,0,62	0/0:8,0:8:7.43:0,7,99	0/0:13,0:13:6.37:0,6,345	0/1:17,1:18:12.59:13,0,275	0/0:7,0:7:11.96:0,12,93	0/0:16,0:16:42.13:0,42,659	0/0:20,0:20:60.19:0,60,953	0/0:16,0:16:41.94:0,42,679	0/1:10,2:11:99:111,0,115	0/1:18,2:20:99:129,0,229	0/1:17,1:18:99:107,0,243	0/1:5,0:5:53.30:80,0,53
chr10	84144774	.	T	TGAGTGTTCCCCTAT	2616.67	PASS	AB=0.648;AC=30;AF=0.938;AN=32;BaseQRankSum=-2.125;DP=49;FS=3.117;HRun=0;HaplotypeScore=24.9913;InbreedingCoeff=-0.1916;MQ=132.43;MQ0=0;MQRankSum=-1.144;QD=63.82;ReadPosRankSum=-1.013;VQSLOD=2.8424;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,0:2:6.02:250,6,0	0/1:1,1:6:14.40:640,0,14	0/1:4,0:6:10.44:562,0,10	1/1:2,0:2:6.02:235,6,0	1/1:1,0:1:3.01:49,3,0	1/1:1,0:1:2.99:24,3,0	./.	1/1:1,0:1:3.01:50,3,0	1/1:3,0:3:6.02:97,6,0	1/1:2,0:2:3.01:50,3,0	./.	./.	1/1:2,0:2:3.01:50,3,0	./.	./.	./.	./.	./.	1/1:2,0:2:6.01:84,6,0	1/1:3,0:3:8.97:137,9,0	./.	1/1:4,0:4:12.02:221,12,0	./.	1/1:3,0:3:9.02:174,9,0	1/1:1,0:1:3.01:39,3,0	./.	1/1:2,0:2:5.96:43,6,0
chr10	84145168	.	ACT	A	227.76	PASS	AB=0.850;AC=5;AF=0.250;AN=20;BaseQRankSum=1.333;DP=52;FS=9.582;HRun=0;HaplotypeScore=25.9909;InbreedingCoeff=0.0517;MQ=133.14;MQ0=15;MQRankSum=3.128;QD=9.49;ReadPosRankSum=2.821;VQSLOD=1.3185;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:2.98:0,3,22	./.	0/1:5,3:7:15.74:121,0,16	0/1:7,3:10:23.66:165,0,24	0/0:2,0:1:0.47:0,0,1	./.	./.	0/0:2,0:2:4.82:0,5,33	./.	0/1:1,0:1:0:0,0,0	./.	./.	./.	./.	0/0:2,0:2:2.99:0,3,23	./.	./.	0/0:2,0:1:2.97:0,3,20	./.	1/1:2,0:2:5.42:24,5,0	./.	./.	./.	./.	0/0:2,0:2:3.87:0,4,25	./.	./.	./.
chr10	84145171	.	G	GA	4776.98	PASS	AB=0.903;AC=48;AF=0.923;AN=52;BaseQRankSum=-1.425;DP=244;FS=36.394;HRun=0;HaplotypeScore=256.6697;InbreedingCoeff=0.0187;MQ=75.26;MQ0=10;MQRankSum=-2.704;QD=19.82;ReadPosRankSum=0.431;VQSLOD=1.3243;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,6:15:25.79:321,26,0	1/1:3,0:3:6.49:89,6,0	0/1:9,2:10:12.52:99,0,13	0/1:9,2:11:29.90:168,0,30	1/1:6,0:5:15.05:208,15,0	1/1:6,0:6:8.82:92,9,0	1/1:6,0:6:14.97:191,15,0	1/1:7,2:9:24:339,24,0	1/1:10,0:10:24.92:311,25,0	1/1:10,0:10:14.41:237,14,0	1/1:4,0:4:6.02:87,6,0	1/1:13,0:13:24.87:243,25,0	1/1:13,0:12:21.09:200,21,0	1/1:18,5:23:12.73:200,13,0	1/1:13,5:18:20.41:249,20,0	1/1:12,0:12:10.97:222,11,0	1/1:3,0:2:3.01:39,3,0	0/1:7,0:6:5.03:134,0,5	1/1:11,0:10:25.02:311,25,0	1/1:8,3:11:20.43:251,20,0	./.	1/1:5,0:5:6:149,6,0	1/1:5,0:5:11.07:126,11,0	0/1:3,0:2:0:0,0,0	1/1:8,0:8:10.56:214,11,0	1/1:10,0:9:16.45:262,16,0	1/1:6,0:6:3.73:33,4,0	./.
chr10	84145831	.	TTC	T	1477.75	PASS	AB=0.873;AC=27;AF=0.482;AN=56;BaseQRankSum=7.875;DP=478;FS=16.761;HRun=0;HaplotypeScore=81.4731;InbreedingCoeff=0.3733;MQ=69.00;MQ0=12;MQRankSum=-3.477;QD=5.71;ReadPosRankSum=4.190;VQSLOD=1.5377;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,10:18:21.06:241,21,0	1/1:3,0:7:2.84:14,3,0	0/0:33,0:11:3.48:0,3,43	0/0:74,0:24:0.20:0,0,2	0/1:13,1:15:15.07:15,0,334	0/1:17,3:20:10.41:10,0,300	1/1:6,5:11:12.03:138,12,0	0/0:22,0:22:21.50:0,21,292	0/1:6,1:7:22.42:22,0,120	1/1:10,0:14:11.12:52,11,0	0/1:6,0:17:9.20:19,0,9	0/0:11,0:10:27.09:0,27,414	0/0:11,0:11:30.03:0,30,393	0/1:12,0:12:16.45:16,0,190	1/1:5,13:19:23.90:256,24,0	1/1:7,0:13:8.52:42,9,0	1/1:6,0:17:11.36:56,11,0	1/1:6,20:26:38.13:447,38,0	0/1:16,2:18:16.43:16,0,182	0/1:11,1:12:10.42:10,0,296	0/0:11,0:11:12.04:0,12,186	0/0:6,0:6:9.02:0,9,118	0/0:4,0:4:9.03:0,9,139	0/0:7,0:7:18.06:0,18,279	0/0:8,0:11:10.91:0,11,59	1/1:5,0:23:41.54:200,42,0	0/0:28,1:29:1.73:0,2,366	1/1:0,0:10:22.73:112,23,0
chr10	84148778	.	AT	A	2692.78	PASS	AB=0.895;AC=16;AF=0.286;AN=56;BaseQRankSum=10.808;DP=574;FS=8.233;HRun=11;HaplotypeScore=58.3466;InbreedingCoeff=0.7946;MQ=69.45;MQ0=0;MQRankSum=2.306;QD=16.03;ReadPosRankSum=2.741;VQSLOD=4.2461;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,2:35:59.31:0,59,792	1/1:1,5:6:14.97:123,15,0	0/0:16,0:16:20.21:0,20,240	0/1:13,1:13:10.45:10,0,83	0/0:25,3:28:16.87:0,17,584	0/0:21,0:20:51.01:0,51,503	1/1:1,20:22:61.96:498,62,0	0/0:35,2:37:34.91:0,35,756	0/0:14,1:15:11.43:0,11,319	1/1:3,17:20:50.90:412,51,0	1/1:1,16:17:44.08:368,44,0	0/0:16,0:16:42.10:0,42,441	0/0:19,3:22:4.85:0,5,462	0/0:10,0:10:27.07:0,27,288	0/0:24,0:24:60.15:0,60,640	1/1:1,22:23:27.95:436,28,0	1/1:3,32:35:86.89:714,87,0	0/0:13,0:13:30.08:0,30,320	0/1:15,3:17:34.85:35,0,270	0/0:21,0:21:57.08:0,57,591	0/0:27,0:27:66.14:0,66,688	0/0:12,0:12:30.06:0,30,313	0/0:20,0:20:57.05:0,57,585	0/0:29,1:30:35.21:0,35,641	1/1:0,13:13:35.96:296,36,0	0/0:19,2:21:10.87:0,11,526	0/0:26,0:26:66.12:0,66,678	0/0:10,0:10:30.08:0,30,318
chr10	84149272	.	G	GTA	688.54	PASS	AB=0.567;AC=3;AF=0.054;AN=56;BaseQRankSum=-4.720;DP=453;FS=4.736;HRun=0;HaplotypeScore=52.2416;InbreedingCoeff=0.4566;MQ=60.17;MQ0=3;MQRankSum=0.065;QD=20.25;ReadPosRankSum=-0.011;VQSLOD=2.8102;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:41.45:0,41,523	0/0:6,0:6:18.06:0,18,225	0/0:4,0:1:3.01:0,3,37	0/0:9,0:3:2.45:0,2,36	0/0:32,0:32:56.22:0,56,906	0/0:15,0:15:39.11:0,39,474	0/0:9,0:9:15.03:0,15,167	0/0:46,0:46:93.24:0,93,1076	0/0:12,0:12:30.07:0,30,349	0/0:19,0:18:48.13:0,48,584	0/0:26,0:27:66.03:0,66,788	0/0:12,0:12:27.09:0,27,337	0/0:14,0:14:33.09:0,33,400	0/0:9,0:9:21.05:0,21,249	0/0:6,0:6:12.04:0,12,150	0/0:12,0:12:33.09:0,33,400	0/0:18,0:18:42.12:0,42,511	0/0:20,0:20:57.13:0,57,681	0/0:20,0:20:48.14:0,48,578	0/0:14,0:14:24.07:0,24,298	0/0:15,0:15:27.05:0,27,309	0/0:6,0:7:17.89:0,18,202	0/0:9,0:9:15.04:0,15,175	0/0:9,0:9:21.05:0,21,249	0/0:25,0:25:57.14:0,57,683	0/1:4,13:17:64.43:590,0,64	0/0:31,0:30:72.21:0,72,886	1/1:5,9:15:12.04:198,12,0
chr10	84149815	.	C	CCCATGGTAGGGGAATTGAGGAGAGAA	48691.25	PASS	AB=0.588;AC=55;AF=0.982;AN=56;BaseQRankSum=-0.853;DP=321;FS=36.625;HRun=0;HaplotypeScore=370.5208;InbreedingCoeff=-0.0406;MQ=63.46;MQ0=1;MQRankSum=-2.951;QD=151.69;ReadPosRankSum=2.545;VQSLOD=3.7272;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:33.07:2062,33,0	1/1:9,0:9:19.62:1435,20,0	1/1:6,1:11:3.77:1794,4,0	0/1:3,0:9:40.23:1376,0,40	1/1:13,0:13:27.08:1400,27,0	1/1:11,0:11:15.04:926,15,0	1/1:10,0:10:21.07:1031,21,0	1/1:17,0:17:48.16:3251,48,0	1/1:15,0:15:33.53:2499,34,0	1/1:18,0:18:45.14:3344,45,0	1/1:8,0:8:9.03:636,9,0	1/1:10,0:10:27.08:2397,27,0	1/1:14,0:14:36.12:2976,36,0	1/1:18,0:17:45.15:3492,45,0	1/1:23,0:23:45.58:3356,46,0	1/1:13,0:13:33.09:2526,33,0	1/1:9,0:9:24.08:1732,24,0	1/1:4,0:4:11.91:370,12,0	1/1:9,0:9:21.04:1223,21,0	1/1:13,0:13:18.53:1259,19,0	1/1:13,0:13:14.97:669,15,0	1/1:13,0:13:25.02:1809,25,0	1/1:5,0:5:12.04:836,12,0	1/1:3,0:3:6.02:534,6,0	1/1:13,0:13:24.04:1607,24,0	1/1:11,0:11:30.06:1759,30,0	1/1:9,0:9:21.07:2207,21,0	1/1:1,0:1:3.01:186,3,0
chr10	84149816	.	C	CCATGGTAGGGGAATTGAGGAGAGAAA	47835.95	PASS	AB=0.733;AC=54;AF=0.964;AN=56;BaseQRankSum=-0.732;DP=306;FS=44.669;HRun=0;HaplotypeScore=354.5921;InbreedingCoeff=-0.0528;MQ=47.58;MQ0=1;MQRankSum=-3.218;QD=156.33;ReadPosRankSum=2.513;VQSLOD=3.5194;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:33.07:2111,33,0	1/1:9,0:9:21.03:1518,21,0	0/1:3,1:6:11.11:764,0,11	0/1:3,0:3:58.29:142,0,58	1/1:12,0:12:27.09:1443,27,0	1/1:11,0:11:15.05:959,15,0	1/1:10,0:10:21.07:1037,21,0	1/1:17,0:17:48.16:3323,48,0	1/1:15,0:15:35.43:2539,35,0	1/1:18,0:18:45.14:3442,45,0	1/1:8,0:8:9.03:665,9,0	1/1:10,0:10:27.08:2431,27,0	1/1:14,0:14:36.12:3090,36,0	1/1:17,0:17:45.15:3644,45,0	1/1:23,0:23:47.48:3498,47,0	1/1:13,0:13:32.74:2630,33,0	1/1:9,0:9:24.08:1748,24,0	1/1:4,0:4:11.94:389,12,0	1/1:8,0:8:21.04:1258,21,0	1/1:13,0:13:20.43:1297,20,0	1/1:12,0:12:14.97:669,15,0	1/1:13,0:13:28.95:1872,29,0	1/1:5,0:5:12.04:881,12,0	1/1:3,0:3:6.02:534,6,0	1/1:13,0:13:24.04:1667,24,0	1/1:11,0:11:30.06:1821,30,0	1/1:9,0:9:21.07:2278,21,0	1/1:1,0:1:3.01:186,3,0
chr10	84157402	.	AT	A	2879.49	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=10.794;DP=543;FS=5.418;HRun=9;HaplotypeScore=57.4494;InbreedingCoeff=0.9370;MQ=74.05;MQ0=0;MQRankSum=0.138;QD=20.72;ReadPosRankSum=1.224;VQSLOD=4.4206;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.15:0,51,589	1/1:1,6:7:15.01:136,15,0	0/0:19,0:17:29.42:0,29,221	0/1:10,0:9:2.12:2,0,57	0/0:29,0:28:78.22:0,78,890	0/0:18,0:19:53.99:0,54,603	0/0:7,0:7:18.04:0,18,198	0/0:28,0:28:66.19:0,66,754	0/0:18,0:18:51.15:0,51,589	1/1:2,17:19:51.02:467,51,0	1/1:1,21:22:60.03:549,60,0	0/0:9,0:9:27.08:0,27,311	0/0:26,0:26:69.19:0,69,782	0/0:23,1:24:40.29:0,40,693	1/1:3,22:25:63.03:577,63,0	1/1:0,19:19:51.03:467,51,0	1/1:1,22:23:63.03:577,63,0	1/1:2,12:14:33.02:302,33,0	0/0:21,0:21:54.16:0,54,623	0/0:32,0:32:87.25:0,87,996	0/0:10,0:10:27.08:0,27,311	0/0:19,0:20:47.97:0,48,533	0/0:16,1:17:20.54:0,21,472	0/0:13,0:13:36.11:0,36,416	0/0:30,0:30:78.23:0,78,900	0/0:26,1:27:47.75:0,48,803	0/0:20,0:20:51.15:0,51,588	0/0:15,0:15:45.08:0,45,489
chr10	84158790	.	A	ATAGAC	12746.40	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-6.462;DP=284;FS=6.907;HRun=0;HaplotypeScore=47.4936;InbreedingCoeff=0.8287;MQ=67.34;MQ0=1;MQRankSum=-5.470;QD=65.03;ReadPosRankSum=1.888;VQSLOD=5.3554;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,6:8:21.07:538,21,0	1/1:1,4:5:15.05:435,15,0	0/0:8,0:7:2.11:0,2,46	0/0:5,0:3:9.03:0,9,166	0/0:24,0:24:66.22:0,66,1350	0/0:14,0:14:33.06:0,33,632	1/1:2,1:3:3.01:95,3,0	1/1:8,18:29:78.23:2197,78,0	0/0:8,0:8:24.03:0,24,423	1/1:6,3:12:30.03:614,30,0	1/1:5,7:13:27.09:724,27,0	0/0:5,0:5:15.05:0,15,324	0/0:11,0:11:24.07:0,24,477	0/0:1,0:1:3.01:0,3,65	1/1:1,5:7:15.05:474,15,0	1/1:1,6:9:15.05:456,15,0	1/1:3,16:20:42.14:1304,42,0	1/1:0,2:2:6.02:190,6,0	1/1:7,12:19:51.17:1416,51,0	1/1:3,8:13:33.11:918,33,0	1/1:1,3:4:2.60:89,3,0	0/0:2,0:2:6.02:0,6,118	0/0:4,0:4:12.04:0,12,261	0/0:4,0:4:12.04:0,12,261	1/1:4,8:12:30.10:905,30,0	1/1:4,8:13:30.08:729,30,0	1/1:5,14:22:45.15:1376,45,0	1/1:2,3:5:9.03:285,9,0
chr10	84161528	.	T	TCTTG	7731.79	PASS	AB=0.659;AC=19;AF=0.339;AN=56;BaseQRankSum=-13.552;DP=694;FS=0.000;HRun=0;HaplotypeScore=103.7299;InbreedingCoeff=0.9074;MQ=69.84;MQ0=2;MQRankSum=0.951;QD=31.30;ReadPosRankSum=-1.034;VQSLOD=4.5899;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:28:12.01:0,12,112	0/0:6,0:6:15.05:0,15,242	0/0:36,0:25:18.06:0,18,286	0/0:26,0:22:21.07:0,21,308	0/0:27,0:27:66.21:0,66,1038	0/0:30,0:30:39.08:0,39,557	1/1:8,14:23:30.10:725,30,0	1/1:22,13:38:51.12:931,51,0	0/0:24,0:24:54.14:0,54,801	0/0:37,0:37:60.20:0,60,968	0/0:26,0:26:42.14:0,42,676	0/0:29,0:29:57.19:0,57,899	0/0:32,0:32:63.19:0,63,968	0/0:25,0:25:54.15:0,54,823	1/1:10,26:39:63.22:1510,63,0	0/0:25,0:25:51.15:0,51,778	0/0:14,0:14:36.04:0,36,523	1/1:4,9:14:18.06:433,18,0	1/1:10,5:16:18.04:347,18,0	1/1:7,20:28:51.12:1120,51,0	1/1:8,16:26:39.13:940,39,0	0/0:22,0:22:42.07:0,42,582	0/0:20,0:20:36.11:0,36,557	0/0:25,0:25:60.20:0,60,969	0/0:5,0:15:20.99:0,21,186	0/1:13,13:27:6.34:789,0,6	1/1:8,20:29:32.96:793,33,0	1/1:4,3:7:6.02:145,6,0
chr10	84162576	.	G	GC	16756.65	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=17.282;DP=674;FS=0.000;HRun=1;HaplotypeScore=91.5643;InbreedingCoeff=0.9999;MQ=84.69;MQ0=0;MQRankSum=-3.244;QD=40.57;ReadPosRankSum=1.579;VQSLOD=5.1579;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:96.33:1435,96,0	1/1:0,15:15:42.14:629,42,0	0/0:24,0:24:72.22:0,72,896	0/0:23,0:23:66.15:0,66,771	0/0:27,0:27:81.23:0,81,1019	0/0:26,0:26:78.25:0,78,1000	1/1:1,18:19:48.16:719,48,0	1/1:0,32:32:96.30:1397,96,0	0/0:22,0:22:66.19:0,66,828	1/1:1,35:35:99:1491,102,0	1/1:0,25:25:69.23:1031,69,0	0/0:24,0:24:72.23:0,72,922	0/0:26,0:26:78.25:0,78,1011	0/0:27,0:27:81.26:0,81,1050	1/1:1,35:36:99:1482,99,0	1/1:2,23:25:30.29:950,30,0	1/1:0,24:24:69.23:1032,69,0	1/1:0,15:15:39.13:583,39,0	1/1:1,24:25:72.19:979,72,0	1/1:2,20:22:54.13:783,54,0	1/1:0,16:16:39.13:584,39,0	0/0:21,0:21:63.19:0,63,792	0/0:21,0:21:60.19:0,60,779	0/0:20,0:20:57.17:0,57,725	1/1:0,26:26:69.23:1032,69,0	1/1:0,20:20:60.19:879,60,0	1/1:0,23:23:54.18:806,54,0	1/1:0,22:22:63.21:943,63,0
chr10	84162951	.	GT	G	5937.17	PASS	AB=0.784;AC=30;AF=0.536;AN=56;BaseQRankSum=7.848;DP=809;FS=2.992;HRun=13;HaplotypeScore=90.3608;InbreedingCoeff=0.8552;MQ=64.23;MQ0=13;MQRankSum=-0.978;QD=13.71;ReadPosRankSum=3.555;VQSLOD=5.3459;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,1:42:64.47:0,64,938	1/1:1,14:16:40.77:286,41,0	0/0:48,0:15:14.66:0,15,80	0/1:37,1:18:16.96:17,0,28	0/0:32,2:39:43.66:0,44,674	0/0:20,0:22:41.16:0,41,449	1/1:4,18:22:47.71:350,48,0	1/1:12,17:30:24.38:339,24,0	0/0:16,0:18:44.74:0,45,408	1/1:10,26:36:45.29:496,45,0	1/1:4,19:23:47.60:346,48,0	0/0:33,0:33:87.06:0,87,809	0/0:20,0:20:48.07:0,48,462	0/0:27,1:29:53.04:0,53,640	1/1:2,31:33:82.57:597,83,0	1/1:3,30:34:88.50:637,88,0	1/1:4,30:36:81.59:581,82,0	1/1:3,14:17:38.99:302,39,0	1/1:8,15:23:14.62:278,15,0	1/1:3,23:26:36.37:424,36,0	0/1:11,17:28:8.63:262,0,9	0/0:31,2:33:26.01:0,26,708	0/0:34,0:36:86.88:0,87,807	0/0:25,1:31:36.74:0,37,551	0/0:7,0:24:48.62:0,49,272	1/1:8,24:32:68.52:502,69,0	1/1:8,19:27:10.58:362,11,0	1/1:0,7:8:22.92:159,23,0
chr10	84163411	.	TA	T	4353.51	PASS	AB=0.810;AC=32;AF=0.571;AN=56;BaseQRankSum=5.566;DP=476;FS=1.301;HRun=12;HaplotypeScore=54.5812;InbreedingCoeff=0.8619;MQ=70.85;MQ0=0;MQRankSum=-1.340;QD=14.71;ReadPosRankSum=1.071;VQSLOD=5.5700;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:25:49.99:0,50,462	1/1:3,6:9:14.92:116,15,0	0/1:14,0:11:5.11:5,0,68	0/0:5,1:6:8.34:0,8,57	0/0:19,0:19:40.08:0,40,435	0/0:17,0:17:42.06:0,42,415	1/1:3,10:17:32.85:217,33,0	1/1:6,19:24:50.72:393,51,0	0/0:6,0:6:18.04:0,18,183	1/1:4,12:16:28.89:215,29,0	1/1:1,20:22:58.76:442,59,0	0/0:14,1:15:36.05:0,36,354	0/0:14,1:16:15.71:0,16,326	0/0:9,0:10:20.86:0,21,190	1/1:3,12:16:31.89:238,32,0	1/1:4,16:20:38.81:302,39,0	1/1:3,13:16:32.87:255,33,0	1/1:2,13:15:38.85:302,39,0	1/1:4,8:13:27.92:194,28,0	1/1:7,23:30:61.29:468,61,0	1/1:2,7:9:20.90:162,21,0	0/0:25,1:26:34.35:0,34,525	0/0:26,2:28:10.63:0,11,461	0/0:12,0:11:27.04:0,27,267	1/1:2,0:16:24.44:71,24,0	1/1:4,21:26:64.75:487,65,0	1/1:1,18:19:44.81:348,45,0	0/1:5,8:13:6.54:139,0,7
chr10	84164828	.	T	TG	3685.03	PASS	AB=0.994;AC=30;AF=0.536;AN=56;BaseQRankSum=-2.938;DP=612;FS=36.084;HRun=0;HaplotypeScore=102.0458;InbreedingCoeff=0.6851;MQ=55.22;MQ0=17;MQRankSum=2.037;QD=10.50;ReadPosRankSum=1.184;VQSLOD=1.7713;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:42,1:42:35.26:347,0,35	1/1:6,0:6:14.18:87,14,0	0/0:40,0:11:14.88:0,15,117	0/0:34,0:9:0.07:0,0,18	0/0:42,0:39:71.60:0,72,441	0/0:22,0:22:37.66:0,38,273	1/1:26,0:26:25.27:239,25,0	1/1:13,15:28:10.29:275,10,0	0/0:11,0:10:21.54:0,22,146	1/1:24,0:24:23.71:248,24,0	1/1:21,0:21:43.28:290,43,0	0/0:24,0:22:47.27:0,47,367	0/0:15,0:15:37.82:0,38,329	0/0:21,0:21:41.47:0,41,323	0/1:13,0:13:6.37:60,0,6	1/1:23,0:23:21.39:240,21,0	1/1:23,0:22:31.96:311,32,0	0/1:19,0:19:3.25:150,0,3	1/1:17,0:13:10.76:150,11,0	1/1:15,1:15:7.88:181,8,0	1/1:10,0:10:23.78:175,24,0	0/0:12,0:12:24.13:0,24,180	0/0:21,0:21:38.37:0,38,322	0/0:18,0:18:38.16:0,38,329	1/1:21,0:21:43.99:290,44,0	1/1:24,0:24:35.32:344,35,0	0/1:27,0:25:15.27:181,0,15	1/1:10,0:10:19.38:118,19,0
chr10	84166496	.	T	TACATAC	5356.81	PASS	AB=0.948;AC=27;AF=0.482;AN=56;BaseQRankSum=1.805;DP=678;FS=9.914;HRun=0;HaplotypeScore=163.7090;InbreedingCoeff=0.3131;MQ=58.56;MQ0=18;MQRankSum=-0.331;QD=12.37;ReadPosRankSum=0.565;VQSLOD=2.9560;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:36:11.04:11,0,25	1/1:2,0:6:9.02:120,9,0	0/0:38,0:11:20.95:0,21,179	0/0:38,0:18:47.40:0,47,381	0/0:19,0:20:41.22:0,41,377	0/0:22,0:20:41.44:0,41,395	0/1:16,0:21:45.97:205,0,46	1/1:32,0:39:79.59:663,80,0	0/0:17,0:16:35.97:0,36,428	1/1:21,0:21:59.98:697,60,0	0/1:18,0:19:18.61:406,0,19	0/0:17,0:17:35.86:0,36,328	0/0:17,0:19:30.49:0,30,462	0/0:21,0:24:13.48:0,13,383	0/1:22,0:29:35.73:287,0,36	0/1:12,21:39:86.33:86,0,113	1/1:24,0:24:1.64:491,2,0	0/1:18,0:19:16.31:239,0,16	1/1:15,0:14:16.26:258,16,0	1/1:25,0:27:53.77:431,54,0	1/1:35,0:34:44.17:495,44,0	0/0:13,0:13:20.67:0,21,177	0/1:15,0:15:1.17:1,0,292	0/0:35,0:36:64.98:0,65,832	0/1:21,0:22:35.72:235,0,36	0/1:16,0:30:27.31:375,0,27	1/1:14,0:16:0.20:140,0,0	1/1:12,0:12:30.11:214,30,0
chr10	84166498	.	C	CAT	5062.18	PASS	AB=0.899;AC=30;AF=0.536;AN=56;BaseQRankSum=4.295;DP=697;FS=15.678;HRun=0;HaplotypeScore=126.0982;InbreedingCoeff=0.6716;MQ=56.31;MQ0=20;MQRankSum=-1.081;QD=11.75;ReadPosRankSum=1.783;VQSLOD=3.9855;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,27:43:24.33:57,0,24	1/1:7,0:7:8.96:75,9,0	0/0:34,0:7:20.95:0,21,179	0/0:37,0:17:47.40:0,47,381	0/0:20,0:20:50.47:0,50,401	0/0:23,0:21:44.52:0,45,427	1/1:23,0:22:4.99:218,5,0	1/1:39,0:39:80.72:666,81,0	0/0:18,1:18:38.96:0,39,376	1/1:24,0:24:59.27:571,59,0	0/1:19,0:19:63.10:233,0,63	0/0:20,0:19:35.86:0,36,303	0/0:21,0:21:6.89:0,7,362	0/0:24,0:24:25.88:0,26,467	1/1:30,0:30:42.85:344,43,0	0/1:40,0:37:29.99:30,0,101	0/1:24,0:24:9.37:350,0,9	1/1:20,0:18:15.35:259,15,0	1/1:16,0:14:13.82:253,14,0	1/1:29,0:28:52.18:425,52,0	1/1:35,0:34:42.18:471,42,0	0/0:14,0:14:23.64:0,24,211	0/0:15,0:15:18.99:0,19,329	0/0:39,0:38:61.25:0,61,733	1/1:23,0:23:11.88:269,12,0	1/1:29,0:29:60.31:460,60,0	1/1:17,0:16:22.55:169,23,0	1/1:12,0:12:29.64:214,30,0
chr10	84168900	.	G	GTGTT	4605.59	PASS	AB=0.889;AC=11;AF=0.196;AN=56;BaseQRankSum=-7.900;DP=807;FS=13.541;HRun=0;HaplotypeScore=132.9303;InbreedingCoeff=0.8470;MQ=71.35;MQ0=5;MQRankSum=-1.672;QD=25.45;ReadPosRankSum=-3.003;VQSLOD=3.0995;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:43:87.10:0,87,811	0/0:11,0:11:27.09:0,27,429	0/0:37,0:27:5.88:0,6,89	0/0:42,0:30:26.01:0,26,358	0/0:30,0:30:72.23:0,72,1120	0/0:37,0:38:87.26:0,87,1303	1/1:24,0:32:26.92:354,27,0	0/1:35,3:40:20.57:404,0,21	0/0:23,0:23:42.13:0,42,641	0/0:43,0:42:60.19:0,60,930	0/0:21,0:21:51.16:0,51,785	0/0:13,0:13:21.07:0,21,331	0/0:40,0:40:78.27:0,78,1227	0/0:26,0:26:54.18:0,54,857	0/0:28,0:28:60.20:0,60,952	0/0:29,0:29:60.20:0,60,953	0/0:29,0:30:66.22:0,66,1024	0/0:18,0:20:30.08:0,30,432	1/1:15,8:23:29.56:583,30,0	1/1:11,18:31:60.17:1349,60,0	1/1:11,23:34:12.57:1273,13,0	0/0:28,0:28:60.20:0,60,953	0/0:25,0:26:42.12:0,42,621	0/0:47,0:47:90.29:0,90,1398	0/0:26,0:26:60.20:0,60,942	0/0:21,0:21:42.13:0,42,645	1/1:8,10:20:27.09:644,27,0	0/0:4,0:4:9.03:0,9,143
chr10	84170758	.	C	CA	1232.18	PASS	AB=0.798;AC=18;AF=0.321;AN=56;BaseQRankSum=-2.135;DP=493;FS=1.185;HRun=15;HaplotypeScore=67.9438;InbreedingCoeff=0.2967;MQ=58.10;MQ0=10;MQRankSum=-0.946;QD=5.63;ReadPosRankSum=-1.604;VQSLOD=2.1232;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,16:28:12.86:254,0,13	1/1:2,3:5:5.99:50,6,0	0/1:10,0:6:1.50:7,0,1	0/0:12,0:8:9.30:0,9,43	0/0:20,0:23:11.36:0,11,156	0/0:16,0:14:25.47:0,25,160	0/0:17,0:19:27.36:0,27,152	0/0:23,0:23:30.69:0,31,175	0/0:21,0:21:21.50:0,22,121	1/1:18,11:28:13.78:233,14,0	0/1:6,8:14:12.05:127,0,12	0/0:17,0:18:12.68:0,13,126	0/1:11,1:13:8.38:8,0,59	0/0:16,0:16:25.04:0,25,142	0/0:15,0:16:24.68:0,25,138	1/1:8,10:18:6.03:158,6,0	0/1:13,11:25:24.33:125,0,24	0/0:29,0:27:13.27:0,13,160	0/1:12,2:15:36.88:37,0,127	0/0:23,1:26:17.76:0,18,196	0/1:12,2:15:26.84:27,0,84	0/0:8,0:9:10.82:0,11,60	0/0:11,1:13:6.31:0,6,142	0/0:9,0:10:3.48:0,3,58	0/1:13,3:19:4.85:145,0,5	1/1:9,8:17:2.93:128,3,0	0/0:18,0:18:26.27:0,26,161	1/1:3,4:8:14.73:105,15,0
chr10	84172896	.	C	CT	2135.98	PASS	AB=0.758;AC=27;AF=0.482;AN=56;BaseQRankSum=-6.846;DP=585;FS=7.342;HRun=15;HaplotypeScore=74.8188;InbreedingCoeff=0.2947;MQ=72.66;MQ0=2;MQRankSum=0.974;QD=5.29;ReadPosRankSum=-0.640;VQSLOD=2.0759;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,11:17:0.09:100,0,0	0/1:5,6:11:5.20:94,0,5	0/1:32,0:20:0.46:0,0,52	0/1:32,0:16:2.40:2,0,14	0/0:25,0:30:26.73:0,27,242	0/1:17,1:22:13.97:14,0,132	1/1:4,6:10:0.89:109,1,0	1/1:11,14:26:0.86:222,1,0	0/0:13,0:13:24.33:0,24,135	1/1:9,18:27:14.87:322,15,0	0/1:10,11:24:9.30:124,0,9	0/0:18,3:21:2.30:0,2,111	0/0:11,0:11:23.17:0,23,135	0/0:20,0:21:36.77:0,37,213	1/1:4,15:21:20.82:166,21,0	0/1:7,10:20:31.97:124,0,32	0/1:12,11:24:19.79:158,0,20	0/1:7,9:16:23.91:39,0,24	1/1:12,7:19:3.55:121,4,0	1/1:10,15:25:8.78:265,9,0	1/1:6,5:15:2.53:94,3,0	0/0:14,0:15:22.43:0,22,129	0/0:24,0:24:36.18:0,36,215	0/0:16,1:18:3.06:0,3,116	1/1:7,14:20:9.85:171,10,0	0/0:16,0:20:19.69:0,20,195	1/1:14,26:40:22.37:186,22,0	0/0:7,0:8:19.62:0,20,114
chr10	84173978	.	G	GT	1733.17	PASS	AB=0.915;AC=29;AF=0.518;AN=56;BaseQRankSum=7.657;DP=595;FS=1.375;HRun=14;HaplotypeScore=101.8538;InbreedingCoeff=0.3335;MQ=60.73;MQ0=5;MQRankSum=-4.664;QD=4.25;ReadPosRankSum=-3.867;VQSLOD=0.8683;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,4:24:12.62:112,0,13	1/1:5,2:8:11.67:80,12,0	0/0:28,0:12:14.66:0,15,93	0/1:22,0:11:23.88:24,0,44	0/0:30,1:36:26.59:0,27,304	0/0:17,2:21:7.60:0,8,286	1/1:4,4:7:7.55:56,8,0	0/1:26,1:26:28.95:64,0,29	0/1:11,1:12:5.39:5,0,88	1/1:29,1:35:36.41:247,36,0	1/1:28,3:34:27.77:266,28,0	0/0:18,0:17:38.36:0,38,250	0/0:12,0:12:29.51:0,30,190	0/0:13,0:13:27.43:0,27,175	0/0:18,0:17:4.17:0,4,61	1/1:10,0:12:15.66:96,16,0	1/1:5,3:25:26.11:166,26,0	0/0:25,0:24:27.54:0,28,147	1/1:24,3:27:4.26:160,4,0	0/1:28,4:32:0.44:150,0,0	0/1:14,1:13:2.99:37,0,3	0/0:14,0:16:8.32:0,8,106	0/1:17,5:25:58.66:59,0,150	0/1:15,2:17:20.63:21,0,155	1/1:15,0:15:12.33:53,12,0	1/1:33,3:34:36.33:230,36,0	0/1:21,1:20:15.81:69,0,16	1/1:10,1:10:4.37:29,4,0
chr10	84173991	.	TTA	T	1600.81	PASS	AB=0.986;AC=24;AF=0.429;AN=56;BaseQRankSum=3.434;DP=561;FS=0.816;HRun=0;HaplotypeScore=102.6989;InbreedingCoeff=-0.0264;MQ=54.84;MQ0=19;MQRankSum=-5.249;QD=4.14;ReadPosRankSum=-8.494;VQSLOD=-0.1700;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:26,1:25:23.26:88,0,23	0/1:7,0:7:0.84:15,0,1	0/0:23,0:7:0.15:0,0,133	0/1:21,0:9:22.21:22,0,68	0/0:32,0:32:74.74:0,75,901	0/0:25,0:25:74.96:0,75,954	1/1:8,0:6:3.85:19,4,0	0/1:28,0:26:46.36:112,0,46	0/0:13,0:12:26.99:0,27,341	0/1:26,0:26:52.69:71,0,53	0/1:30,0:30:6.55:184,0,7	0/0:18,0:17:48.02:0,48,621	0/0:12,0:12:36.02:0,36,444	0/0:15,0:14:27.85:0,28,454	0/1:12,1:12:33.30:106,0,33	0/1:14,0:13:21.74:42,0,22	0/1:27,0:26:4.24:40,0,4	0/1:23,1:23:56.22:56,0,80	0/1:23,0:22:22.90:96,0,23	1/1:30,0:30:4.49:198,4,0	0/1:10,0:8:7.20:46,0,7	0/0:14,0:13:29.61:0,30,354	0/0:22,0:22:55.72:0,56,586	0/1:19,1:19:39.51:40,0,561	1/1:17,0:17:30.51:226,31,0	1/1:26,0:24:11:153,11,0	1/1:25,1:25:5.43:242,5,0	0/1:10,0:9:12.76:15,0,13
chr10	84177143	.	TTGTG	T	413.78	PASS	AB=0.795;AC=12;AF=0.231;AN=52;BaseQRankSum=3.018;DP=472;FS=8.333;HRun=0;HaplotypeScore=79.7058;InbreedingCoeff=0.4514;MQ=63.42;MQ0=9;MQRankSum=-1.217;QD=3.34;ReadPosRankSum=-0.010;VQSLOD=0.7417;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:24:23.66:47,0,24	0/0:4,0:4:3:0,3,25	./.	./.	0/0:12,0:12:12.04:0,12,220	0/0:21,0:21:20.41:0,20,313	0/0:12,0:12:2.54:0,3,12	0/0:18,0:18:1.25:0,1,3	0/0:11,0:11:3.01:0,3,69	0/0:16,0:16:12.02:0,12,153	0/0:10,0:10:6.02:0,6,95	0/0:18,0:17:7.19:0,7,111	0/0:24,0:22:24.02:0,24,305	0/0:12,0:12:6.02:0,6,107	0/0:14,0:21:9.03:0,9,158	0/0:23,0:23:11.77:0,12,132	0/0:21,0:21:11.98:0,12,149	0/0:29,0:27:31.91:0,32,576	0/0:14,0:17:8.73:0,9,70	0/0:18,0:18:17.57:0,18,192	1/1:17,0:16:3.01:40,3,0	0/0:15,0:14:15.05:0,15,246	1/1:13,4:16:9.50:138,10,0	1/1:18,2:19:6.02:92,6,0	0/1:11,1:16:16.09:37,0,16	1/1:20,2:22:8.29:113,8,0	0/0:12,0:12:3.01:0,3,46	1/1:5,3:8:6.02:92,6,0
chr10	84177984	.	G	GTTT	6412.27	PASS	AB=0.749;AC=28;AF=0.500;AN=56;BaseQRankSum=-1.378;DP=597;FS=8.087;HRun=12;HaplotypeScore=99.4090;InbreedingCoeff=0.8183;MQ=73.45;MQ0=0;MQRankSum=-1.332;QD=19.08;ReadPosRankSum=-4.205;VQSLOD=2.4056;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,16:26:17.65:285,18,0	1/1:4,8:14:32.72:478,33,0	0/0:11,0:11:5.36:0,5,53	0/0:15,0:14:10.51:0,11,111	0/0:24,0:26:65.99:0,66,697	0/0:20,0:21:53.92:0,54,564	1/1:3,0:17:19.28:236,19,0	1/1:11,31:44:90.22:1091,90,0	0/0:24,0:26:56.87:0,57,606	1/1:5,22:31:73.07:953,73,0	1/1:5,16:27:24.39:593,24,0	0/0:20,0:22:43.74:0,44,486	0/0:15,0:16:23.09:0,23,230	0/0:15,0:15:14.44:0,14,146	0/1:5,0:23:13.95:34,0,14	1/1:3,15:22:9.34:375,9,0	1/1:4,14:19:21.54:361,22,0	1/1:2,0:10:11.72:44,12,0	1/1:4,15:21:52.26:709,52,0	1/1:3,10:14:37.38:454,37,0	1/1:2,11:15:15.05:275,15,0	0/1:13,1:15:19.36:19,0,278	0/0:17,0:19:21.25:0,21,271	0/0:19,0:21:44.76:0,45,449	0/0:18,0:23:31.03:0,31,325	0/0:26,0:31:60.73:0,61,639	1/1:2,31:36:35.86:505,36,0	0/0:14,0:15:28.46:0,28,332
chr10	84178143	.	TA	T	2339.65	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.703;DP=473;FS=0.883;HRun=9;HaplotypeScore=101.1785;InbreedingCoeff=0.9576;MQ=77.67;MQ0=0;MQRankSum=-9.606;QD=20.34;ReadPosRankSum=0.675;VQSLOD=3.5799;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.16:0,54,623	1/1:1,9:10:27.01:247,27,0	0/0:17,1:18:11.60:0,12,373	0/0:7,0:7:15.04:0,15,170	0/0:18,0:18:48.06:0,48,544	0/0:13,0:13:36.09:0,36,405	0/0:17,0:17:39.09:0,39,430	0/0:38,0:38:87.17:0,87,948	0/0:10,0:10:30.09:0,30,346	1/1:7,18:25:57.01:517,57,0	1/1:2,15:17:44.90:390,45,0	0/0:12,0:12:33.10:0,33,380	0/0:7,0:7:18.04:0,18,199	0/0:12,0:12:33.08:0,33,364	0/0:17,0:17:48.14:0,48,554	1/1:2,13:15:4.39:289,4,0	1/1:1,17:18:41.94:372,42,0	0/0:8,0:8:21.06:0,21,242	0/0:15,0:15:42.12:0,42,485	0/0:25,0:25:69.21:0,69,796	0/0:9,0:8:27.08:0,27,309	0/0:15,0:15:45.12:0,45,511	0/0:16,0:16:48.10:0,48,539	0/0:11,0:11:24.07:0,24,277	1/1:4,26:30:78.02:707,78,0	0/0:22,1:23:32.74:0,33,622	0/0:33,0:32:99:0,99,1109	0/0:14,0:14:38.93:0,39,366
chr10	84178838	.	G	GTTT	2597.20	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=10.571;DP=597;FS=3.067;HRun=8;HaplotypeScore=107.0129;InbreedingCoeff=0.8303;MQ=63.57;MQ0=6;MQRankSum=-5.991;QD=16.23;ReadPosRankSum=0.202;VQSLOD=0.7241;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:99:110,0,110	1/1:8,2:10:24.49:278,24,0	0/0:30,0:17:23.84:0,24,320	0/1:28,0:13:0.63:1,0,80	0/0:29,0:29:73.63:0,74,881	0/0:18,0:18:54.12:0,54,649	0/0:8,0:8:21.02:0,21,231	0/0:24,0:24:32.14:0,32,636	0/0:13,0:13:36.06:0,36,426	1/1:25,3:28:59.75:767,60,0	1/1:16,2:19:52.79:545,53,0	0/0:16,0:16:42.12:0,42,552	0/0:14,0:14:42.10:0,42,521	0/0:20,0:20:54.10:0,54,657	0/0:20,0:20:54.09:0,54,647	1/1:16,3:20:45.54:558,46,0	1/1:26,1:25:40.03:516,40,0	0/0:22,0:22:27.37:0,27,461	0/0:21,0:21:57.11:0,57,669	0/0:21,0:21:51.09:0,51,639	0/0:14,0:14:33.05:0,33,402	0/0:12,0:12:33.08:0,33,403	0/0:21,0:21:54.14:0,54,679	0/0:20,0:20:57.03:0,57,659	0/0:20,0:20:57.14:0,57,701	0/0:43,0:43:95.40:0,95,1532	0/0:29,0:29:84.16:0,84,1024	0/0:19,0:20:49.13:0,49,616
chr10	84178844	.	T	TTTGTTG	4638.48	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.729;DP=605;FS=6.495;HRun=0;HaplotypeScore=138.6312;InbreedingCoeff=0.9742;MQ=62.31;MQ0=7;MQRankSum=-4.575;QD=34.11;ReadPosRankSum=0.017;VQSLOD=4.2549;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,15:27:18.06:527,18,0	1/1:10,0:11:30.10:503,30,0	0/0:27,0:14:18.95:0,19,253	0/0:30,0:13:6.46:0,6,61	0/0:29,0:28:63.20:0,63,1092	0/0:21,0:21:54.17:0,54,951	0/0:8,0:8:15.05:0,15,240	0/0:20,0:20:45.14:0,45,614	0/0:13,0:13:30.07:0,30,529	1/1:29,0:29:53.94:903,54,0	1/1:19,0:19:48.16:883,48,0	0/0:15,0:15:45.15:0,45,831	0/0:15,0:15:39.13:0,39,708	0/0:21,0:21:48.11:0,48,793	0/0:22,0:22:54.18:0,54,1001	1/1:19,0:20:47.99:834,48,0	1/1:29,0:29:38.82:987,39,0	0/0:21,0:21:39.05:0,39,506	0/0:23,0:22:54.09:0,54,822	0/0:22,0:22:54.15:0,54,869	0/0:14,0:13:30.09:0,30,477	0/0:13,0:13:33.10:0,33,564	0/0:20,0:20:51.16:0,51,856	0/0:21,0:21:48.11:0,48,855	0/0:24,0:24:55.71:0,56,831	0/0:42,0:42:66.44:0,66,1896	0/0:30,0:30:75.21:0,75,1197	0/0:18,0:18:45.04:0,45,712
chr10	84178856	.	GTTGTTTTGTT	G	1440.74	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.867;DP=606;FS=8.763;HRun=0;HaplotypeScore=188.2800;InbreedingCoeff=0.8802;MQ=56.66;MQ0=7;MQRankSum=-6.151;QD=53.36;ReadPosRankSum=2.298;VQSLOD=2.3715;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:27.09:0,27,1084	0/0:8,0:10:30.10:0,30,1147	0/0:24,0:13:9:0,9,147	0/0:27,0:8:9.03:0,9,205	0/0:24,0:24:51.18:0,51,2429	0/0:23,0:23:66.23:0,66,2983	0/0:8,0:8:18.05:0,18,635	0/0:21,0:21:32.74:0,33,987	0/0:10,0:10:24.08:0,24,1161	0/0:23,0:26:36.11:0,36,1352	0/0:18,0:20:42.13:0,42,1281	0/0:20,0:20:45.15:0,45,2002	0/0:16,0:16:36.12:0,36,1628	0/0:19,0:19:42.13:0,42,1833	0/0:22,0:22:57.18:0,57,2554	0/0:17,0:20:36.10:0,36,1370	0/0:17,0:33:36.58:0,37,1054	0/0:21,0:21:36.11:0,36,1274	0/0:21,0:20:24.08:0,24,1053	0/0:22,0:22:48.15:0,48,2076	0/0:12,0:11:24.08:0,24,984	0/0:13,0:13:30.10:0,30,1315	0/0:29,0:29:66.23:0,66,2674	0/0:19,0:21:39.13:0,39,1786	1/1:4,23:27:51.03:1536,51,0	0/0:43,0:43:90.30:0,90,3771	0/0:31,0:31:54.19:0,54,2338	0/0:18,0:18:24.08:0,24,1101
chr10	84178861	.	T	TG	1963.43	PASS	AB=0.777;AC=7;AF=0.125;AN=56;BaseQRankSum=10.062;DP=607;FS=5.259;HRun=0;HaplotypeScore=83.2177;InbreedingCoeff=-0.1436;MQ=55.59;MQ0=9;MQRankSum=-4.808;QD=13.36;ReadPosRankSum=3.515;VQSLOD=4.9183;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:39.66:40,0,163	0/1:6,4:10:65.32:191,0,65	0/0:21,0:10:26.98:0,27,323	0/0:35,0:9:17.24:0,17,181	0/0:23,0:23:69.22:0,69,949	0/0:24,0:24:69.22:0,69,949	0/0:10,0:10:30.09:0,30,403	0/0:23,0:23:58.73:0,59,896	0/0:10,0:10:30.07:0,30,399	0/1:14,10:24:99:470,0,269	0/1:7,12:19:43.45:557,0,43	0/0:20,0:20:60.20:0,60,835	0/0:17,0:17:48.16:0,48,670	0/0:18,0:18:54.11:0,54,698	0/0:24,0:24:72.22:0,72,976	0/1:14,6:20:99:317,0,251	0/1:24,10:33:99:483,0,110	0/1:16,2:19:36.47:36,0,581	0/0:22,0:20:60.02:0,60,749	0/0:22,0:22:63.20:0,63,852	0/0:13,0:12:36.09:0,36,469	0/0:14,0:14:42.14:0,42,587	0/0:30,0:30:81.26:0,81,1115	0/0:19,0:19:53.61:0,54,682	0/0:25,0:25:19.53:0,20,249	0/0:42,1:43:81.49:0,81,1692	0/0:30,0:30:86.11:0,86,1162	0/0:16,0:16:48.16:0,48,671
chr10	84180154	.	T	TCCCAAGCCTGC	928.23	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.267;DP=594;FS=5.832;HRun=0;HaplotypeScore=188.8540;InbreedingCoeff=0.9558;MQ=92.61;MQ0=0;MQRankSum=-3.197;QD=58.01;ReadPosRankSum=1.099;VQSLOD=2.7977;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.29:0,84,2964	0/0:7,0:7:21.07:0,21,702	0/0:22,0:22:55.95:0,56,1382	0/0:31,0:31:78.54:0,79,2116	0/0:15,0:15:42.08:0,42,1288	0/0:19,0:19:45.11:0,45,1229	0/0:25,0:25:72.06:0,72,1803	0/0:29,0:29:81.23:0,81,2301	0/0:26,0:26:77.75:0,78,1598	0/0:14,0:14:39.12:0,39,1168	0/0:11,0:11:30.08:0,30,858	0/0:25,0:25:72.02:0,72,1732	0/0:19,0:19:54.11:0,54,1616	0/0:33,0:33:96.02:0,96,2612	0/0:22,0:22:65.73:0,66,1706	0/0:33,0:33:99:0,99,2510	0/0:23,0:23:69.12:0,69,1954	0/0:21,0:21:57.05:0,57,1432	0/0:17,0:17:48.11:0,48,1133	0/0:19,0:19:54.14:0,54,1657	0/0:24,0:24:69.22:0,69,2356	0/0:22,0:22:63.16:0,63,1822	0/0:8,0:8:24.08:0,24,822	0/0:35,0:35:99:0,104,2783	1/1:0,10:16:18.06:1019,18,0	0/0:19,0:19:57.18:0,57,1721	0/0:27,0:27:75.02:0,75,1803	0/0:4,0:4:12:0,12,263
chr10	84181971	.	CGAAG	C	770.29	PASS	AB=1.000;AC=20;AF=0.435;AN=46;BaseQRankSum=-0.612;DP=468;FS=2.586;HRun=0;HaplotypeScore=88.3242;InbreedingCoeff=0.4882;MQ=60.41;MQ0=4;MQRankSum=1.740;QD=3.67;ReadPosRankSum=2.569;VQSLOD=1.6643;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:12.75:0,13,66	0/0:7,0:7:6.02:0,6,109	./.	./.	0/0:11,0:11:6.02:0,6,138	0/0:10,0:9:3.01:0,3,52	1/1:18,0:18:7.55:58,8,0	./.	0/0:11,0:11:12.04:0,12,273	0/0:16,0:15:8.94:0,9,98	./.	0/0:18,0:18:9.03:0,9,206	0/0:8,0:9:3.01:0,3,52	0/1:19,0:19:30.79:31,0,186	0/1:32,0:32:5.77:69,0,6	0/0:13,0:13:2.98:0,3,21	0/0:18,0:18:5.92:0,6,40	./.	1/1:13,0:11:4.26:84,4,0	1/1:14,1:15:11.95:171,12,0	1/1:40,1:39:2.84:44,3,0	1/1:14,3:16:2.29:37,2,0	0/0:10,0:10:6.02:0,6,106	0/0:19,0:19:8.99:0,9,149	1/1:17,0:17:9.49:101,9,0	1/1:15,0:16:5.99:66,6,0	1/1:17,0:16:15.05:223,15,0	1/1:5,0:5:4.56:44,5,0
chr10	84182009	.	A	AG	340.49	PASS	AB=0.648;AC=1;AF=0.018;AN=56;BaseQRankSum=4.172;DP=498;FS=0.988;HRun=2;HaplotypeScore=94.2119;InbreedingCoeff=-0.0254;MQ=46.47;MQ0=34;MQRankSum=-4.090;QD=9.73;ReadPosRankSum=1.193;VQSLOD=1.5113;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,18:34:99:415,0,432	0/0:7,0:6:17.73:0,18,221	0/0:4,0:1:2.98:0,3,21	0/0:11,1:3:3.01:0,3,42	0/0:13,0:12:31.32:0,31,390	0/0:18,0:17:44.16:0,44,549	0/0:21,0:21:39.11:0,39,524	0/0:24,0:12:24.95:0,25,305	0/0:13,0:13:35.92:0,36,501	0/0:14,0:13:39.13:0,39,522	0/0:12,0:9:21.03:0,21,271	0/0:17,0:17:31.29:0,31,571	0/0:11,0:11:33.08:0,33,427	0/0:21,0:19:51.17:0,51,704	0/0:36,0:36:92.46:0,92,1148	0/0:22,0:21:33.09:0,33,429	0/0:15,0:13:23.19:0,23,351	0/0:13,0:13:33.08:0,33,437	0/0:23,0:9:24.06:0,24,306	0/0:17,0:16:42:0,42,478	0/0:44,0:41:83.99:0,84,993	0/0:13,0:12:36.07:0,36,450	0/0:13,0:13:33.17:0,33,406	0/0:20,0:20:45.15:0,45,625	0/0:14,0:14:39.12:0,39,505	0/0:21,0:20:60.08:0,60,726	0/0:17,0:15:44.92:0,45,509	0/0:8,0:7:21.04:0,21,272
chr10	84182037	.	AG	A	1008.47	PASS	AB=0.982;AC=18;AF=0.321;AN=56;BaseQRankSum=14.055;DP=518;FS=0.451;HRun=2;HaplotypeScore=99.1385;InbreedingCoeff=0.1455;MQ=50.19;MQ0=11;MQRankSum=-8.655;QD=3.43;ReadPosRankSum=2.260;VQSLOD=0.4134;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:22.63:0,23,640	0/0:4,0:4:5.28:0,5,69	0/0:15,0:3:7.57:0,8,80	0/0:18,0:6:15.04:0,15,212	0/0:12,0:12:29.77:0,30,462	0/0:24,0:23:59.92:0,60,912	0/1:22,0:22:91.23:129,0,91	0/1:28,0:24:19.73:20,0,461	0/0:16,0:16:39.13:0,39,617	0/1:18,3:20:73.48:73,0,139	1/1:13,2:12:7.03:17,7,0	0/0:14,0:14:36.12:0,36,571	0/0:11,0:11:12.33:0,12,432	0/0:21,0:20:46.21:0,46,808	0/1:34,0:34:7.11:210,0,7	0/1:16,1:17:36.34:38,0,36	1/1:10,1:10:8.26:89,8,0	1/1:15,1:16:18.19:116,18,0	0/0:20,0:14:17.55:0,18,316	0/1:17,0:17:29.09:101,0,29	0/1:53,0:51:10.96:11,0,454	0/0:16,0:16:41.62:0,42,628	0/0:16,0:16:39.28:0,39,607	0/0:18,0:18:42.14:0,42,669	1/1:18,0:18:37.48:179,37,0	0/1:23,0:22:99:115,0,134	0/1:16,0:14:75.29:75,0,80	0/1:3,0:3:12.09:12,0,37
chr10	84182039	.	AGGAGGGAG	A	8564.25	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=7.591;DP=514;FS=0.000;HRun=0;HaplotypeScore=125.5799;InbreedingCoeff=0.9245;MQ=50.92;MQ0=11;MQRankSum=-10.449;QD=35.10;ReadPosRankSum=-0.063;VQSLOD=4.2851;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:42.10:0,42,1326	0/0:1,0:3:5.95:0,6,44	0/0:16,0:4:11.93:0,12,254	0/0:18,0:6:6.02:0,6,163	0/0:12,0:12:24.08:0,24,875	0/0:23,0:22:57.20:0,57,2046	1/1:6,16:22:35.96:946,36,0	1/1:16,12:24:33.11:777,33,0	0/0:16,0:16:30.57:0,31,1043	0/0:10,0:20:37.71:0,38,342	0/0:4,0:12:20.91:0,21,164	0/0:16,0:16:39.12:0,39,1230	0/0:12,0:12:33.11:0,33,1081	0/0:21,0:20:51.17:0,51,1868	1/1:4,29:33:69.24:1813,69,0	0/0:6,0:17:14.47:0,14,124	0/0:9,0:10:8.99:0,9,75	1/1:1,14:15:21.07:552,21,0	1/1:13,7:15:18.06:349,18,0	1/1:3,12:15:33.11:856,33,0	1/1:24,27:50:15.52:384,16,0	0/0:16,0:16:42.14:0,42,1563	0/0:15,0:15:36.12:0,36,1251	0/0:19,0:19:45.15:0,45,1650	1/1:2,16:18:39.13:1025,39,0	1/1:8,15:22:45.15:1154,45,0	1/1:5,11:16:23.91:630,24,0	1/1:2,1:3:3.01:79,3,0
chr10	84182047	.	G	GA	1870.88	PASS	AB=0.982;AC=16;AF=0.286;AN=56;BaseQRankSum=13.762;DP=492;FS=0.428;HRun=1;HaplotypeScore=95.3099;InbreedingCoeff=0.1069;MQ=54.44;MQ0=6;MQRankSum=-9.871;QD=7.31;ReadPosRankSum=2.109;VQSLOD=0.8245;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:48.12:0,48,645	0/0:2,0:2:5.81:0,6,47	0/0:18,0:6:9.89:0,10,144	0/0:17,0:7:12:0,12,141	0/0:16,0:16:30.09:0,30,402	0/0:22,0:21:57.19:0,57,791	0/1:22,0:22:39.34:219,0,39	0/1:23,0:20:99:276,0,239	0/0:16,0:16:41.93:0,42,567	0/1:17,3:19:50.91:51,0,197	0/0:13,2:12:19.59:0,20,91	0/0:14,0:14:39.13:0,39,545	0/0:12,0:12:36.10:0,36,476	0/0:23,0:23:66.21:0,66,903	1/1:33,0:33:25.34:328,25,0	0/1:17,1:18:28.85:29,0,103	0/0:9,1:9:8.44:0,8,40	1/1:15,0:15:18.73:108,19,0	0/1:15,0:13:99:121,0,158	0/1:14,0:14:49.94:187,0,50	0/1:46,0:45:77.53:78,0,268	0/0:15,0:15:42.14:0,42,587	0/0:15,0:15:42.14:0,42,585	0/0:18,0:18:48.16:0,48,671	1/1:17,0:17:38.08:226,38,0	0/1:19,0:19:19.54:296,0,20	0/1:12,0:11:14.97:118,0,15	0/1:2,0:2:9.13:9,0,36
chr10	84182059	.	GGGAA	G	949.87	PASS	AB=0.967;AC=18;AF=0.321;AN=56;BaseQRankSum=14.480;DP=493;FS=2.955;HRun=0;HaplotypeScore=118.7514;InbreedingCoeff=0.1621;MQ=65.63;MQ0=1;MQRankSum=-11.351;QD=3.83;ReadPosRankSum=7.260;VQSLOD=1.5780;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:71.89:0,72,1256	0/1:4,0:4:16.42:16,0,34	0/0:13,0:7:21.02:0,21,298	0/0:17,0:14:32.65:0,33,305	0/0:13,0:13:32.91:0,33,683	0/0:24,0:23:66.04:0,66,1598	0/1:29,0:29:44.46:44,0,250	0/0:23,0:22:8.42:0,8,274	0/0:13,0:13:35.70:0,36,753	0/1:16,0:15:43.24:205,0,43	0/1:14,0:12:17.94:189,0,18	0/0:13,0:13:39.10:0,39,903	0/0:12,0:12:33.05:0,33,799	0/0:23,0:23:69:0,69,1592	0/1:38,0:38:81.28:152,0,81	0/1:20,0:20:41.30:41,0,159	0/1:6,6:12:72.95:86,0,73	1/1:15,0:15:14.85:48,15,0	0/0:14,0:13:22.76:0,23,197	1/1:13,0:13:2.62:78,3,0	0/1:38,0:37:7:7,0,127	0/0:15,0:15:45.15:0,45,1179	0/0:16,0:16:42.59:0,43,1012	0/0:22,0:22:66.09:0,66,1372	1/1:18,0:18:11.89:93,12,0	0/1:18,0:18:23.10:79,0,23	1/1:11,0:10:20.60:83,21,0	0/1:2,0:2:1.16:1,0,22
chr10	84182412	.	TAAG	T	986.19	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.881;DP=872;FS=6.830;HRun=0;HaplotypeScore=120.3252;InbreedingCoeff=0.9997;MQ=82.29;MQ0=0;MQRankSum=-2.422;QD=34.01;ReadPosRankSum=-0.526;VQSLOD=3.9730;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:95.04:0,95,2076	0/0:17,0:17:48.15:0,48,993	0/0:30,0:30:69.23:0,69,1346	0/0:18,0:18:41.94:0,42,744	0/0:22,0:22:63.22:0,63,1377	0/0:34,0:34:84.27:0,84,1782	0/0:32,0:32:81.28:0,81,1755	0/0:39,0:39:99:0,105,2286	0/0:23,0:23:66.23:0,66,1441	0/0:44,0:44:99:0,126,2747	0/0:15,0:15:36.12:0,36,787	0/0:36,0:36:99:0,102,2215	0/0:30,0:30:72.23:0,72,1504	0/0:41,0:41:99:0,114,2370	0/0:46,0:46:99:0,135,2941	0/0:25,0:25:66.22:0,66,1389	0/0:38,0:38:99:0,108,2315	0/0:32,0:32:84.29:0,84,1806	0/0:27,0:27:69.23:0,69,1448	0/0:31,0:31:84.29:0,84,1792	0/0:34,0:34:96.31:0,96,2039	0/0:34,0:34:90.31:0,90,1968	0/0:22,0:22:63.22:0,63,1377	0/0:54,0:54:99:0,154,3304	1/1:3,26:29:69.23:1081,69,0	0/0:28,0:28:75.26:0,75,1619	0/0:40,0:40:99:0,120,2448	0/0:12,0:12:36.07:0,36,701
chr10	84183704	.	GCA	G	506.94	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.067;DP=751;FS=12.136;HRun=0;HaplotypeScore=86.1641;InbreedingCoeff=0.9989;MQ=88.98;MQ0=0;MQRankSum=-2.784;QD=28.16;ReadPosRankSum=-1.091;VQSLOD=4.4227;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,157,2799	0/0:10,0:10:30.10:0,30,543	0/0:30,0:30:72.24:0,72,1292	0/0:25,0:25:63.21:0,63,1109	0/0:21,0:21:57.20:0,57,1045	0/0:28,0:28:84.27:0,84,1494	0/0:24,0:24:69.24:0,69,1249	0/0:34,0:34:90.31:0,90,1650	0/0:34,0:34:99:0,102,1848	0/0:15,0:15:45.15:0,45,820	0/0:19,0:19:57.20:0,57,1045	0/0:23,0:23:66.23:0,66,1206	0/0:31,0:31:87.30:0,87,1588	0/0:35,0:35:99:0,102,1858	0/0:28,0:28:84.29:0,84,1533	0/0:38,0:38:99:0,111,2029	0/0:29,0:29:84.29:0,84,1522	0/0:30,0:30:90.31:0,90,1632	0/0:24,0:24:69.23:0,69,1227	0/0:28,0:28:84.29:0,84,1525	0/0:31,0:31:93.31:0,93,1667	0/0:25,0:25:72.25:0,72,1299	0/0:24,0:24:69.22:0,69,1228	0/0:28,0:28:78.27:0,78,1429	1/1:2,16:18:42.14:602,42,0	0/0:34,0:34:99:0,99,1807	0/0:20,0:20:60.20:0,60,1064	0/0:10,0:10:30.10:0,30,541
chr10	84186954	.	A	AT	5323.33	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-12.836;DP=584;FS=5.234;HRun=10;HaplotypeScore=59.6131;InbreedingCoeff=0.9922;MQ=83.43;MQ0=0;MQRankSum=-2.577;QD=22.85;ReadPosRankSum=-1.746;VQSLOD=5.1989;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:74.85:0,75,610	0/0:10,0:10:29.95:0,30,242	0/0:26,0:26:43.13:0,43,327	0/0:21,0:19:12.99:0,13,209	0/0:20,1:23:25.99:0,26,395	0/0:13,0:13:14.80:0,15,271	1/1:6,9:15:38.98:378,39,0	1/1:7,27:35:34.65:715,35,0	0/0:11,0:11:23.96:0,24,194	0/0:31,0:31:53.34:0,53,546	0/0:16,0:16:35.95:0,36,296	0/0:15,0:16:40.98:0,41,323	0/0:18,0:18:45.78:0,46,365	0/0:15,0:15:41.91:0,42,337	1/1:3,23:26:69.17:735,69,0	0/0:12,0:12:35.95:0,36,293	0/0:29,0:29:82.94:0,83,671	1/1:4,17:20:26.52:487,27,0	1/1:11,18:29:32.49:545,32,0	1/1:6,19:25:35.43:559,35,0	1/1:6,15:21:45.11:480,45,0	0/0:22,0:22:62.93:0,63,517	0/0:19,0:19:44.94:0,45,369	0/0:19,0:19:50.91:0,51,415	0/0:19,0:19:47.92:0,48,392	1/1:2,21:24:35.20:532,35,0	1/1:5,17:22:20.47:423,20,0	1/1:1,14:15:45.09:470,45,0
chr10	84189212	.	TC	T	5359.65	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.804;DP=650;FS=4.933;HRun=1;HaplotypeScore=61.8670;InbreedingCoeff=0.9977;MQ=89.50;MQ0=0;MQRankSum=-1.398;QD=39.41;ReadPosRankSum=-2.367;VQSLOD=4.4853;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,2057	0/0:6,0:6:18.05:0,18,265	0/0:27,0:27:76.99:0,77,1229	0/0:23,0:23:58.35:0,58,851	0/0:30,0:30:90.29:0,90,1396	0/0:26,0:26:78.27:0,78,1247	1/1:0,11:11:27.09:378,27,0	1/1:0,37:37:99:1546,111,0	0/0:25,0:25:75.26:0,75,1186	0/0:26,0:26:78.27:0,78,1244	0/0:21,0:21:63.20:0,63,975	0/0:30,0:30:90.31:0,90,1434	0/0:22,0:22:66.23:0,66,1053	0/0:22,0:22:66.23:0,66,1053	0/0:35,0:35:99:0,105,1628	0/0:12,0:12:33.10:0,33,505	0/0:28,0:28:81.26:0,81,1261	0/0:24,0:24:72.25:0,72,1142	1/1:0,24:24:72.24:1007,72,0	1/1:0,27:27:75.25:1044,75,0	1/1:0,21:21:54.18:755,54,0	0/0:21,0:21:63.21:0,63,1004	0/0:14,0:14:39.09:0,39,623	0/0:23,0:23:69.22:0,69,1075	0/0:22,0:22:66.20:0,66,1006	0/0:26,0:26:78.25:0,78,1218	1/1:0,16:16:45.15:629,45,0	0/0:8,0:8:24.08:0,24,384
chr10	84190531	.	G	GGGTTT	21281.69	PASS	AB=0.955;AC=35;AF=0.648;AN=54;BaseQRankSum=-5.031;DP=468;FS=8.505;HRun=0;HaplotypeScore=79.2430;InbreedingCoeff=0.8975;MQ=47.67;MQ0=16;MQRankSum=-9.850;QD=67.13;ReadPosRankSum=-0.449;VQSLOD=5.2718;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,16:21:57.15:1634,57,0	1/1:6,3:9:12:286,12,0	0/0:19,0:3:6.02:0,6,86	./.	0/0:24,0:23:69.24:0,69,1470	0/0:20,0:20:60.21:0,60,1276	1/1:5,5:10:27.07:668,27,0	1/1:15,7:20:57.19:1578,57,0	0/0:15,0:15:36.12:0,36,767	1/1:4,9:13:23.78:1023,24,0	1/1:7,16:23:57.03:1485,57,0	0/1:20,0:21:12.45:12,0,1195	0/0:10,0:10:24.08:0,24,511	0/0:13,0:13:39.12:0,39,791	1/1:7,12:19:48.16:1462,48,0	1/1:6,15:19:48.14:1373,48,0	1/1:5,18:23:51.08:1879,51,0	1/1:2,22:25:63.22:1901,63,0	1/1:4,8:12:36.12:1074,36,0	1/1:1,12:12:33.07:941,33,0	1/1:4,6:11:21.03:508,21,0	0/0:12,0:12:33.11:0,33,687	0/0:10,0:10:24.08:0,24,511	0/0:13,0:13:36.11:0,36,708	1/1:0,27:28:78.20:2359,78,0	1/1:1,8:10:30.10:922,30,0	1/1:7,16:22:57.20:1707,57,0	1/1:2,5:7:15.05:469,15,0
chr10	84190533	.	G	GT	1829.29	PASS	AB=0.991;AC=31;AF=0.574;AN=54;BaseQRankSum=13.008;DP=460;FS=13.209;HRun=1;HaplotypeScore=118.8320;InbreedingCoeff=0.5789;MQ=47.02;MQ0=16;MQRankSum=-9.702;QD=5.92;ReadPosRankSum=2.647;VQSLOD=-0.5987;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,1:21:17.01:111,0,17	0/1:8,0:8:24.34:30,0,24	1/1:19,0:3:4.72:17,5,0	./.	0/0:24,0:23:69.21:0,69,878	0/0:21,0:21:63.19:0,63,796	1/1:10,0:10:1.86:70,2,0	0/1:24,0:22:0.06:123,0,0	0/0:14,0:14:36.12:0,36,467	1/1:14,1:14:6.99:115,7,0	0/1:22,0:22:30.53:120,0,31	0/0:21,0:21:51.01:0,51,748	0/0:9,1:10:24.06:0,24,296	0/0:13,0:13:39.11:0,39,489	1/1:16,0:16:41.98:171,42,0	1/1:21,0:19:8.49:118,8,0	1/1:24,0:24:35.84:205,36,0	1/1:25,0:25:7.78:144,8,0	1/1:11,0:11:28.34:109,28,0	1/1:12,0:11:26.42:112,26,0	0/1:12,0:11:16.16:40,0,16	0/0:12,0:12:33.08:0,33,392	0/0:8,1:9:24.08:0,24,311	0/0:14,0:14:39.12:0,39,492	1/1:27,0:26:41.40:223,41,0	1/1:10,0:10:26.23:108,26,0	1/1:25,0:23:29.47:164,29,0	1/1:6,1:5:12.98:50,13,0
chr10	84190557	.	C	CA	1754.37	PASS	AB=0.827;AC=20;AF=0.357;AN=56;BaseQRankSum=2.691;DP=471;FS=1.496;HRun=13;HaplotypeScore=98.6171;InbreedingCoeff=0.6255;MQ=51.82;MQ0=9;MQRankSum=-2.427;QD=8.43;ReadPosRankSum=-2.358;VQSLOD=2.5012;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,2:26:49.98:278,50,0	1/1:2,8:10:18.02:167,18,0	0/0:10,0:2:2.82:0,3,14	0/0:10,0:4:2.91:0,3,19	0/0:17,1:18:6.85:0,7,180	0/0:26,0:26:70.45:0,70,479	0/0:7,0:9:15.94:0,16,94	0/0:27,1:27:27.66:0,28,321	0/0:14,2:16:16.31:0,16,205	0/1:6,11:16:5.16:232,0,5	1/1:13,9:23:32.79:278,33,0	0/1:13,2:15:10.76:11,0,222	0/1:10,1:13:5.04:5,0,106	0/0:10,0:10:29.61:0,30,196	0/0:16,0:17:12.80:0,13,217	1/1:9,10:17:27.03:251,27,0	1/1:13,14:27:33.04:307,33,0	0/0:28,1:29:33.66:0,34,366	0/0:15,0:16:9.89:0,10,203	0/0:10,0:9:14.86:0,15,103	0/0:14,0:14:20.69:0,21,140	0/0:9,0:9:8.88:0,9,62	0/0:11,0:11:19.84:0,20,125	0/1:14,2:16:11.03:11,0,223	1/1:11,0:19:28.36:142,28,0	1/1:8,6:14:6.40:187,6,0	0/0:26,0:23:45.21:0,45,332	1/1:5,3:6:9.01:84,9,0
chr10	84192007	.	T	TAGA	5071.64	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-7.584;DP=726;FS=4.716;HRun=0;HaplotypeScore=102.7366;InbreedingCoeff=0.9998;MQ=84.57;MQ0=0;MQRankSum=-4.140;QD=42.26;ReadPosRankSum=-0.690;VQSLOD=5.6480;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,50:57:99:2174,102,0	0/0:11,0:11:30.06:0,30,448	0/0:19,0:19:41.99:0,42,601	0/0:27,0:27:62.51:0,63,867	0/0:22,0:22:60.19:0,60,921	0/0:22,0:22:63.18:0,63,951	0/0:37,0:37:99:0,105,1601	0/0:31,0:31:84.28:0,84,1308	0/0:24,0:24:66.22:0,66,1043	0/0:28,0:28:75.22:0,75,1103	0/0:14,0:14:39.12:0,39,592	0/0:26,0:26:72.23:0,72,1115	0/0:22,0:22:57.18:0,57,878	0/0:26,0:26:69.22:0,69,1068	0/0:29,0:29:75.24:0,75,1163	0/0:31,0:31:87.27:0,87,1330	0/0:31,0:31:90.31:0,90,1414	0/0:24,0:24:66.18:0,66,1019	0/0:21,0:21:54.15:0,54,808	0/0:17,0:17:41.68:0,42,611	0/0:48,0:48:99:0,138,2152	0/0:27,0:27:75.23:0,75,1140	0/0:17,0:17:42.13:0,42,641	0/0:25,0:25:63.21:0,63,990	1/1:4,24:30:48.16:1048,48,0	1/1:4,15:19:54.11:1063,54,0	0/0:27,0:26:75.24:0,75,1163	1/1:0,14:14:36.12:787,36,0
chr10	84192945	.	A	AAAAAAG	10358.62	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=2.492;DP=556;FS=0.382;HRun=0;HaplotypeScore=127.9863;InbreedingCoeff=0.9133;MQ=67.19;MQ0=2;MQRankSum=-9.720;QD=33.74;ReadPosRankSum=1.059;VQSLOD=4.1689;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,27:45:35.20:1529,35,0	1/1:8,0:8:11.95:200,12,0	0/0:29,0:17:21.06:0,21,358	0/0:10,0:6:3.57:0,4,73	0/0:28,0:28:69.14:0,69,1143	0/0:17,0:17:43.38:0,43,843	1/1:24,0:24:36.10:945,36,0	1/1:26,0:26:15.74:421,16,0	0/0:16,0:16:42.12:0,42,767	1/1:12,0:12:26.97:419,27,0	1/1:12,0:12:24.01:478,24,0	0/0:22,0:22:63.11:0,63,952	0/0:27,0:27:66.15:0,66,1190	0/0:16,0:16:45.08:0,45,774	1/1:14,2:16:21.07:595,21,0	1/1:17,0:17:36.12:745,36,0	1/1:40,1:41:81.28:1688,81,0	1/1:19,1:21:15.04:399,15,0	1/1:25,0:25:57.74:1192,58,0	1/1:13,0:13:11.96:209,12,0	1/1:9,0:9:2.86:81,3,0	0/0:12,0:12:27.05:0,27,448	0/0:22,0:22:62.95:0,63,719	0/0:30,0:30:72.22:0,72,1362	0/0:20,0:20:49.92:0,50,755	1/1:23,0:23:48.11:915,48,0	1/1:12,1:13:18.06:500,18,0	1/1:2,0:2:3.01:42,3,0
chr10	84192951	.	G	GAAAAAGA	11479.26	PASS	AB=0.752;AC=29;AF=0.518;AN=56;BaseQRankSum=-0.090;DP=571;FS=11.756;HRun=0;HaplotypeScore=129.3483;InbreedingCoeff=0.7152;MQ=65.84;MQ0=2;MQRankSum=-8.545;QD=35.32;ReadPosRankSum=2.474;VQSLOD=4.0587;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:43:52.16:1055,0,52	1/1:7,0:7:11.95:182,12,0	0/0:25,0:16:34.58:0,35,477	0/0:12,0:8:14.76:0,15,120	0/0:26,0:27:69.12:0,69,1323	0/0:17,0:17:46.37:0,46,1010	1/1:4,17:25:29.93:1210,30,0	0/1:11,19:32:39.70:1406,0,40	0/0:14,0:15:42.13:0,42,909	1/1:13,0:13:25.52:434,26,0	1/1:9,0:10:8.17:380,8,0	0/0:25,0:25:72.01:0,72,1227	0/0:26,0:26:66.20:0,66,1411	0/0:16,0:17:45.99:0,46,945	1/1:2,13:17:21.07:620,21,0	1/1:18,0:18:6.96:580,7,0	1/1:41,0:41:81.28:1512,81,0	1/1:5,18:26:12.92:358,13,0	1/1:5,18:28:34.28:1846,34,0	0/1:7,5:15:30.29:106,0,30	1/1:2,5:11:6.49:141,6,0	0/0:11,0:11:29.72:0,30,515	0/0:22,0:23:61.27:0,61,814	0/0:25,0:27:72.22:0,72,1597	0/0:20,0:20:32.66:0,33,957	1/1:20,0:20:54.18:984,54,0	1/1:3,12:17:17.58:629,18,0	1/1:2,0:2:3.01:36,3,0
chr10	84192952	.	A	AAAAAG	10868.75	PASS	AB=0.996;AC=26;AF=0.464;AN=56;BaseQRankSum=-1.244;DP=571;FS=14.649;HRun=0;HaplotypeScore=113.1495;InbreedingCoeff=0.5523;MQ=67.39;MQ0=2;MQRankSum=-7.485;QD=33.65;ReadPosRankSum=3.900;VQSLOD=4.0299;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:41,1:42:99:897,0,142	1/1:2,5:7:11.95:274,12,0	0/0:27,0:17:7.66:0,8,436	0/0:13,0:9:16.81:0,17,124	0/0:27,0:27:78.19:0,78,1237	0/0:17,0:17:46.34:0,46,856	1/1:24,0:24:29.78:719,30,0	0/1:30,0:30:99:810,0,110	0/0:15,0:15:42.13:0,42,781	1/1:0,10:13:29.90:625,30,0	1/1:2,7:12:23.84:532,24,0	0/0:25,0:25:75.16:0,75,1166	0/0:25,0:25:66.20:0,66,1222	0/0:18,0:18:48.15:0,48,863	1/1:17,0:17:6.07:380,6,0	1/1:1,16:17:13.52:922,14,0	1/1:2,38:41:81.28:2296,81,0	0/1:26,0:26:9.06:220,0,9	0/1:29,0:29:0.47:1143,0,0	0/1:14,0:14:48.55:49,0,83	0/1:11,0:11:26.54:57,0,27	0/0:11,0:11:30.07:0,30,481	0/0:23,0:23:65.38:0,65,837	0/0:27,0:27:72.21:0,72,1327	0/0:20,0:20:47.70:0,48,922	1/1:1,19:20:54.18:1502,54,0	1/1:18,0:18:17.62:396,18,0	1/1:2,0:2:3.01:48,3,0
chr10	84193724	.	TG	T	762.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.900;DP=558;FS=0.000;HRun=2;HaplotypeScore=63.9641;InbreedingCoeff=0.9928;MQ=94.99;MQ0=0;MQRankSum=-0.530;QD=33.14;ReadPosRankSum=1.888;VQSLOD=3.5621;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1716	0/0:8,0:8:21.06:0,21,293	0/0:24,0:24:55.63:0,56,957	0/0:26,1:27:56.16:0,56,893	0/0:30,0:30:87.25:0,87,1239	0/0:21,0:21:60.19:0,60,878	0/0:24,0:24:69.22:0,69,1013	0/0:35,0:35:99:0,99,1465	0/0:15,0:15:45.15:0,45,666	0/0:26,0:26:75.24:0,75,1086	0/0:14,0:14:36.11:0,36,514	0/0:13,0:13:39.13:0,39,584	0/0:22,0:22:60.19:0,60,873	0/0:18,0:18:54.18:0,54,809	0/0:23,0:23:69.22:0,69,1015	0/0:13,0:13:33.10:0,33,474	0/0:20,0:20:60.20:0,60,896	0/0:24,0:24:69.23:0,69,1031	0/0:11,0:11:33.11:0,33,495	0/0:18,0:18:54.18:0,54,778	1/1:0,23:23:66.21:857,66,0	0/0:17,0:17:48.16:0,48,706	0/0:9,0:9:24.08:0,24,360	0/0:20,0:20:60.18:0,60,859	0/0:11,0:11:33.11:0,33,494	0/0:23,0:23:69.22:0,69,1014	0/0:18,0:18:51.16:0,51,744	0/0:11,0:11:33.10:0,33,467
chr10	84193988	.	G	GTTTT	6330.02	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-3.526;DP=457;FS=13.729;HRun=10;HaplotypeScore=76.2453;InbreedingCoeff=0.9636;MQ=65.63;MQ0=7;MQRankSum=-3.374;QD=29.04;ReadPosRankSum=-3.694;VQSLOD=1.0345;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,1:29:50.04:341,50,0	1/1:4,2:7:15.05:278,15,0	0/0:21,0:11:7.41:0,7,65	0/0:12,0:7:17.84:0,18,191	0/0:23,0:23:60.12:0,60,818	0/0:19,0:19:57.07:0,57,749	1/1:4,6:9:24.04:482,24,0	1/1:26,3:31:58.01:962,58,0	0/0:14,0:16:37.29:0,37,490	1/1:7,10:17:31.84:554,32,0	1/1:5,4:10:15.01:274,15,0	0/0:13,0:13:30.04:0,30,416	0/0:15,0:16:45.02:0,45,556	0/0:5,0:5:12.01:0,12,158	0/0:3,0:19:16.42:0,16,40	1/1:9,4:15:38.90:592,39,0	1/1:3,18:21:35.61:786,36,0	0/0:4,0:18:18.01:0,18,60	1/1:12,14:26:51.12:918,51,0	1/1:5,8:13:16.87:346,17,0	1/1:5,2:7:12.49:193,12,0	0/0:5,0:6:10.25:0,10,124	0/0:15,0:15:36.07:0,36,446	0/0:23,0:23:54.11:0,54,764	1/1:2,0:12:20.57:126,21,0	0/0:16,0:16:36.02:0,36,443	1/1:3,11:16:24.47:479,24,0	0/0:15,0:15:33.06:0,33,424
chr10	84194128	.	TGA	T	98.01	PASS	AB=0.952;AC=8;AF=0.160;AN=50;BaseQRankSum=1.069;DP=323;FS=3.219;HRun=0;HaplotypeScore=54.6350;InbreedingCoeff=0.1581;MQ=62.61;MQ0=9;MQRankSum=0.430;QD=1.29;ReadPosRankSum=0.671;VQSLOD=1.4556;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,4:11:12.03:133,12,0	0/1:3,0:3:0:0,0,0	0/1:21,0:6:0:0,0,0	./.	0/1:15,4:19:33.43:33,0,371	0/0:28,0:27:48.14:0,48,673	0/0:6,0:6:3.01:0,3,41	0/0:21,0:18:12.04:0,12,163	0/1:7,1:8:15.21:15,0,206	0/0:9,0:9:17.96:0,18,187	0/0:6,0:6:6.01:0,6,69	0/0:5,0:5:9.03:0,9,132	0/1:9,0:9:9.10:9,0,271	0/0:2,0:4:6:0,6,52	0/0:3,0:5:6:0,6,52	0/0:7,0:11:6.01:0,6,69	0/0:9,0:13:8.95:0,9,72	0/0:30,0:30:29.91:0,30,833	0/0:4,0:3:6.02:0,6,80	./.	./.	0/0:1,0:5:9:0,9,79	0/1:5,0:5:24.21:24,0,56	0/0:9,0:9:15.05:0,15,224	0/0:11,0:11:9:0,9,93	0/0:8,0:8:21.02:0,21,217	0/0:8,0:10:5.97:0,6,46	0/0:13,0:14:21.02:0,21,205
chr10	84194171	.	CT	C	264.68	PASS	AB=1.000;AC=10;AF=0.185;AN=54;BaseQRankSum=6.688;DP=329;FS=0.000;HRun=6;HaplotypeScore=50.4616;InbreedingCoeff=0.6628;MQ=68.25;MQ0=15;MQRankSum=-5.323;QD=6.79;ReadPosRankSum=-0.504;VQSLOD=-0.6492;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,6:8:17.80:150,18,0	0/0:2,0:2:1.25:0,1,3	0/0:41,0:15:20.96:0,21,217	0/0:41,0:10:7.05:0,7,117	0/0:17,0:17:42.11:0,42,522	0/0:22,0:22:59.76:0,60,686	0/0:4,0:4:12.04:0,12,157	0/0:29,0:27:78.22:0,78,977	0/0:8,0:8:21.05:0,21,260	0/0:9,0:9:24.07:0,24,297	0/0:7,0:7:18.02:0,18,195	0/0:6,0:6:15.05:0,15,197	0/0:8,0:8:24.03:0,24,264	0/0:4,0:4:9.03:0,9,118	1/1:1,1:2:6.01:59,6,0	0/0:8,0:8:17.99:0,18,215	0/0:15,0:15:30.10:0,30,391	0/0:26,0:26:72.20:0,72,901	0/0:9,0:7:21.02:0,21,229	0/0:7,0:7:21.01:0,21,242	0/0:8,0:8:14.59:0,15,146	./.	0/0:5,0:5:11.97:0,12,136	0/1:6,0:6:9.33:9,0,70	1/1:1,5:6:17.87:151,18,0	0/1:8,0:6:8.71:9,0,58	0/0:10,0:9:21.94:0,22,261	1/1:9,0:8:13.24:41,13,0
chr10	84194177	.	TA	T	218.79	PASS	AB=0.850;AC=8;AF=0.148;AN=54;BaseQRankSum=6.717;DP=321;FS=8.001;HRun=9;HaplotypeScore=48.9179;InbreedingCoeff=0.5214;MQ=69.24;MQ0=10;MQRankSum=-2.675;QD=7.29;ReadPosRankSum=-0.098;VQSLOD=0.4727;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:7:7.60:19,0,8	./.	0/0:39,0:15:16.33:0,16,185	0/0:39,0:10:3.65:0,4,67	0/0:17,0:17:45.10:0,45,491	0/0:23,0:23:54.08:0,54,585	0/0:4,0:4:12.04:0,12,138	0/0:36,0:35:99:0,99,1045	0/0:8,0:8:20.98:0,21,224	0/0:9,0:9:24.07:0,24,270	0/0:7,0:7:12.04:0,12,138	0/0:5,0:5:15.04:0,15,173	0/0:8,0:8:15.03:0,15,164	0/0:3,0:3:9.03:0,9,104	1/1:2,0:2:2.74:12,3,0	0/0:7,0:7:15.04:0,15,173	0/0:15,0:15:39.07:0,39,418	0/0:24,0:24:69.16:0,69,777	0/0:10,0:10:20.95:0,21,202	0/0:7,0:7:15.04:0,15,173	0/0:7,0:7:21.04:0,21,221	0/0:2,0:2:5.96:0,6,44	0/0:4,0:4:9.03:0,9,104	0/0:3,0:3:6.02:0,6,69	1/1:6,0:6:8.31:38,8,0	0/1:4,3:5:22.54:70,0,23	0/0:10,0:9:18.05:0,18,207	1/1:0,8:8:24:214,24,0
chr10	84194187	.	G	GTATTTATT	1236.46	PASS	AC=8;AF=0.160;AN=50;BaseQRankSum=5.426;DP=275;FS=0.000;HRun=0;HaplotypeScore=84.7927;InbreedingCoeff=0.6807;MQ=71.18;MQ0=3;MQRankSum=-5.804;QD=44.16;ReadPosRankSum=-0.127;VQSLOD=3.1211;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:20.81:472,21,0	./.	0/0:23,0:11:8.70:0,9,115	0/0:18,0:9:6.49:0,6,108	0/0:15,0:15:30.09:0,30,718	0/0:21,0:21:48.15:0,48,1183	0/0:4,0:4:6.02:0,6,114	0/0:36,0:36:66.22:0,66,1609	0/0:7,0:7:12.04:0,12,311	0/0:10,0:10:24.08:0,24,600	0/0:5,0:5:12.04:0,12,311	0/0:7,0:7:15.05:0,15,356	0/0:5,0:5:6.02:0,6,129	0/0:3,0:3:6.02:0,6,155	1/1:1,0:1:3.01:54,3,0	0/0:6,0:6:15.05:0,15,375	0/0:18,0:18:42.14:0,42,1082	0/0:23,0:23:48.16:0,48,1100	0/0:13,0:12:21.07:0,21,453	0/0:5,0:5:6.02:0,6,155	0/0:9,0:9:24.08:0,24,621	0/0:2,0:2:3.01:0,3,78	0/0:3,0:3:3.01:0,3,78	./.	1/1:2,3:6:9.03:375,9,0	./.	0/0:7,0:7:15.05:0,15,360	1/1:7,0:9:18.06:474,18,0
chr10	84195390	.	TG	T	1320.21	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=11.107;DP=695;FS=3.051;HRun=3;HaplotypeScore=91.3195;InbreedingCoeff=0.8673;MQ=81.17;MQ0=0;MQRankSum=-0.631;QD=11.48;ReadPosRankSum=1.164;VQSLOD=1.8057;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:42:81.76:485,82,0	0/0:11,0:11:30.09:0,30,405	0/0:17,0:17:50.16:0,50,628	0/0:25,0:25:66.18:0,66,872	0/0:14,0:14:39.13:0,39,555	0/0:11,0:10:30.10:0,30,432	0/0:44,0:44:99:0,114,1592	0/0:33,0:31:87.26:0,87,1212	0/0:23,0:23:60.19:0,60,841	0/0:32,0:32:93.24:0,93,1231	0/0:13,0:13:39.09:0,39,525	0/0:31,0:31:90.29:0,90,1257	0/0:24,0:24:69.23:0,69,981	0/0:25,0:25:69.19:0,69,968	0/1:29,0:29:20.93:210,0,21	0/0:27,0:27:81.25:0,81,1107	0/0:24,0:24:72.23:0,72,977	0/0:21,0:21:60.20:0,60,860	0/0:21,0:21:63.21:0,63,901	0/0:17,0:17:42.13:0,42,586	0/0:82,0:82:99:0,226,3202	0/0:18,0:18:51.16:0,51,698	0/0:15,0:15:42.14:0,42,597	0/0:35,0:35:96.32:0,96,1381	1/1:0,14:14:39.12:483,39,0	1/1:22,0:22:29.28:212,29,0	0/0:17,0:17:48.16:0,48,691	1/1:8,0:8:21.80:95,22,0
chr10	84195393	.	GA	G	3233.06	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.912;DP=681;FS=2.396;HRun=3;HaplotypeScore=83.9339;InbreedingCoeff=0.9865;MQ=80.42;MQ0=0;MQRankSum=-0.920;QD=28.87;ReadPosRankSum=0.400;VQSLOD=2.9802;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:99:1374,111,0	0/0:11,0:11:9.31:0,9,133	0/0:18,0:18:52.69:0,53,687	0/0:22,0:22:63.21:0,63,882	0/0:14,0:14:39.56:0,40,539	0/0:11,0:10:30.10:0,30,432	0/0:41,0:41:99:0,114,1602	0/0:32,0:30:84.27:0,84,1191	0/0:26,0:26:69.14:0,69,901	0/0:30,0:30:80.28:0,80,473	0/0:14,0:14:35.11:0,35,207	0/0:31,0:31:90.25:0,90,1252	0/0:24,0:24:69.20:0,69,969	0/0:25,0:25:69.14:0,69,932	1/1:3,26:29:66.21:817,66,0	0/0:29,0:29:30.09:0,30,416	0/0:24,0:24:67.08:0,67,393	0/0:20,0:20:60.16:0,60,840	0/0:23,0:23:69.14:0,69,927	0/0:15,0:15:42.14:0,42,603	0/0:80,0:80:99:0,223,3168	0/0:17,0:17:51.11:0,51,691	0/0:14,0:14:42.10:0,42,581	0/0:32,0:32:96.31:0,96,1362	1/1:14,0:14:34.47:153,34,0	1/1:0,22:22:63.19:767,63,0	0/0:16,0:16:48.16:0,48,690	1/1:0,8:8:24.08:297,24,0
chr10	84195510	.	T	TTC	1619.06	PASS	AB=0.957;AC=25;AF=0.500;AN=50;BaseQRankSum=4.413;DP=236;FS=62.275;HRun=0;HaplotypeScore=93.1494;InbreedingCoeff=-0.5400;MQ=33.96;MQ0=10;MQRankSum=-4.313;QD=7.71;ReadPosRankSum=3.668;VQSLOD=1.0673;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:10:6.80:212,7,0	0/1:5,0:5:12.94:131,0,13	./.	./.	0/0:5,4:8:5.35:0,5,44	0/1:3,5:7:10.40:103,0,10	0/1:13,0:13:99:149,0,147	0/1:14,0:12:41.73:232,0,42	0/1:6,4:10:7.16:7,0,68	0/1:4,0:4:40.93:41,0,44	./.	0/1:6,0:6:37.93:57,0,38	0/1:7,0:7:12.95:50,0,13	0/1:9,0:9:3.64:171,0,4	0/0:8,0:8:12.51:0,13,162	0/1:13,0:13:86.93:87,0,164	0/1:7,0:6:36.98:37,0,57	0/1:5,0:6:6.91:135,0,7	0/1:5,0:4:19.75:72,0,20	1/1:3,0:2:2.74:13,3,0	0/1:40,0:36:92.01:92,0,175	0/1:11,1:11:13.82:35,0,14	0/1:8,0:8:29.86:56,0,30	0/1:13,1:12:8.69:9,0,26	1/1:3,0:3:1.68:4,2,0	0/1:4,0:4:28.84:29,0,69	0/1:8,0:8:40.36:40,0,95	0/0:6,0:4:8.99:0,9,78
chr10	84195604	.	C	CT	76.48	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=1.444;DP=395;FS=5.918;HRun=3;HaplotypeScore=58.6455;InbreedingCoeff=0.5635;MQ=54.64;MQ0=0;MQRankSum=0.813;QD=6.37;ReadPosRankSum=-2.180;VQSLOD=-0.2627;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:59.33:0,59,706	0/0:4,0:4:5.99:0,6,58	0/1:6,0:4:2.30:2,0,61	0/0:9,0:4:15.05:0,15,178	0/0:6,0:6:12.03:0,12,142	0/0:13,0:13:27.07:0,27,311	0/0:24,0:24:68.91:0,69,697	0/0:23,0:23:51.10:0,51,560	0/0:12,0:12:32.96:0,33,338	0/0:30,0:30:90.09:0,90,973	0/0:17,0:17:39.10:0,39,449	0/0:19,0:19:54.13:0,54,613	0/0:13,0:13:36.03:0,36,398	0/0:9,0:9:22.68:0,23,274	0/0:15,0:15:39.06:0,39,427	0/0:17,0:17:48.07:0,48,550	0/0:15,0:15:39.10:0,39,452	0/0:8,0:8:18.03:0,18,201	0/0:17,0:16:48.01:0,48,500	0/0:14,0:14:33.07:0,33,371	0/0:26,0:26:50.43:0,50,524	0/0:19,0:19:51.09:0,51,570	0/0:5,0:5:9.01:0,9,97	0/0:12,0:12:32.92:0,33,341	1/1:0,6:6:12.04:162,12,0	0/0:14,0:14:39.10:0,39,446	0/0:13,0:13:39.08:0,39,438	0/0:2,0:2:5.98:0,6,56
chr10	84197708	.	T	TTCTC	6412.43	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=2.025;DP=451;FS=6.010;HRun=0;HaplotypeScore=103.1942;InbreedingCoeff=0.9266;MQ=69.02;MQ0=1;MQRankSum=-5.557;QD=22.66;ReadPosRankSum=2.709;VQSLOD=3.9487;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:15:3:41,3,0	1/1:6,0:6:12.03:178,12,0	0/0:27,0:16:29.82:0,30,372	0/0:14,0:10:13.42:0,13,221	0/0:16,0:16:33.10:0,33,501	0/0:15,0:15:36.11:0,36,544	1/1:16,0:16:18.06:250,18,0	1/1:29,0:29:63.12:967,63,0	0/0:8,0:8:21.06:0,21,296	1/1:15,2:17:36.12:690,36,0	1/1:11,10:22:21.05:381,21,0	0/0:16,0:16:19.21:0,19,300	0/0:20,0:20:39.12:0,39,586	0/0:10,0:10:15.05:0,15,233	1/1:6,7:14:9.02:209,9,0	1/1:20,0:20:24.08:401,24,0	1/1:21,1:22:36.11:564,36,0	0/0:9,0:9:15.05:0,15,223	1/1:18,1:19:34.58:584,35,0	1/1:16,2:18:30.09:486,30,0	1/1:21,1:21:12.86:207,13,0	0/0:10,0:10:15.05:0,15,247	0/0:11,0:11:12.03:0,12,170	0/0:12,0:12:20.47:0,20,346	1/1:16,0:16:27.09:542,27,0	1/1:19,0:18:34.32:466,34,0	1/1:20,1:20:24.54:343,25,0	1/1:6,0:6:6.01:104,6,0
chr10	84197717	.	T	TCTC	6464.56	PASS	AB=0.971;AC=28;AF=0.500;AN=56;BaseQRankSum=-1.698;DP=516;FS=20.957;HRun=0;HaplotypeScore=124.8958;InbreedingCoeff=0.6703;MQ=53.66;MQ0=15;MQRankSum=-2.698;QD=20.39;ReadPosRankSum=7.586;VQSLOD=2.9681;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:15:2.81:57,3,0	1/1:4,7:11:11.52:200,12,0	0/0:21,0:10:29.82:0,30,396	0/0:11,0:7:14.17:0,14,218	0/0:22,0:22:34.88:0,35,521	0/0:21,0:19:39.98:0,40,599	1/1:9,13:23:17.63:323,18,0	1/1:9,23:34:67.89:1062,68,0	0/0:12,0:11:24.04:0,24,341	1/1:14,5:20:14.26:599,14,0	0/1:24,0:25:38.63:368,0,39	0/0:17,0:17:27.04:0,27,342	0/0:24,0:24:48:0,48,647	0/0:13,0:13:26.87:0,27,315	0/1:15,0:15:39.20:126,0,39	1/1:3,17:21:23.70:475,24,0	1/1:16,7:24:35.29:626,35,0	0/0:11,0:9:15.93:0,16,216	1/1:5,9:16:36.67:603,37,0	1/1:6,12:19:32.38:533,32,0	1/1:4,13:16:13.57:236,14,0	0/0:9,0:9:18.11:0,18,258	0/0:14,0:14:19.63:0,20,212	0/0:24,0:24:26.29:0,26,398	1/1:5,7:19:26.96:482,27,0	0/1:21,0:20:71.02:303,0,71	1/1:5,10:17:23.90:412,24,0	0/1:11,0:9:41.38:60,0,41
chr10	84197718	.	T	TCTC	598.54	PASS	AB=0.968;AC=17;AF=0.304;AN=56;BaseQRankSum=4.260;DP=515;FS=34.062;HRun=0;HaplotypeScore=147.7875;InbreedingCoeff=-0.0034;MQ=52.46;MQ0=18;MQRankSum=-0.576;QD=2.11;ReadPosRankSum=6.136;VQSLOD=0.6268;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,2:18:2.28:15,2,0	1/1:13,0:12:0.82:8,1,0	0/0:21,0:10:30.09:0,30,452	0/0:11,0:7:13.46:0,13,244	0/0:23,0:23:43.79:0,44,590	0/0:21,0:19:44.99:0,45,627	0/1:20,0:21:31.29:31,0,37	0/1:30,0:30:28.80:90,0,29	0/0:13,0:11:29.97:0,30,394	0/1:21,0:20:20.49:20,0,89	0/1:27,0:27:24.23:24,0,98	0/0:15,0:15:31.45:0,31,367	0/0:23,0:23:59.85:0,60,735	0/0:14,0:14:32.88:0,33,384	0/0:17,0:16:5.76:0,6,100	0/1:20,0:20:13.32:13,0,17	0/1:24,0:24:4.43:29,0,4	0/0:11,0:9:17.05:0,17,240	0/1:16,0:16:38.04:56,0,38	0/1:19,0:19:9.11:9,0,46	0/0:16,0:14:2.91:0,3,41	0/0:9,0:9:26.59:0,27,304	0/0:14,0:14:25.13:0,25,213	0/0:24,0:24:32.24:0,32,437	1/1:12,6:18:26.27:289,26,0	0/1:21,0:19:99:101,0,159	0/1:15,0:17:23.21:67,0,23	0/1:12,0:10:4.28:4,0,78
chr10	84197829	.	CTT	C	2583.12	PASS	AB=0.725;AC=17;AF=0.304;AN=56;BaseQRankSum=-0.362;DP=537;FS=0.893;HRun=12;HaplotypeScore=74.6322;InbreedingCoeff=0.7423;MQ=66.32;MQ0=11;MQRankSum=0.573;QD=12.79;ReadPosRankSum=1.758;VQSLOD=2.3055;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,1:23:5.85:6,0,85	0/1:5,1:14:9.58:10,0,52	0/0:23,0:10:19.82:0,20,160	0/1:13,1:6:7.04:7,0,83	0/0:30,0:31:83.65:0,84,1127	0/0:16,0:16:45.15:0,45,671	1/1:4,16:20:33.05:336,33,0	1/1:13,20:31:60.07:595,60,0	0/0:13,0:13:36.05:0,36,457	0/0:7,0:28:61.91:0,62,299	0/0:7,0:20:28.30:0,28,124	0/0:14,0:15:41.55:0,42,475	0/0:17,0:17:42.08:0,42,567	0/0:8,0:9:23.54:0,24,266	1/1:5,12:17:33.04:336,33,0	0/0:8,0:21:41.40:0,41,184	0/0:7,1:22:10.28:0,10,112	0/0:17,0:20:53.15:0,53,611	1/1:5,16:20:29.87:433,30,0	1/1:9,19:29:47.80:540,48,0	1/1:2,6:7:12.02:122,12,0	0/0:13,0:13:27.08:0,27,383	0/0:19,0:18:42.02:0,42,525	0/0:10,0:10:27.09:0,27,400	0/0:9,1:21:2.95:0,3,93	0/0:9,0:21:29.76:0,30,347	1/1:3,19:21:39.05:397,39,0	0/0:8,0:15:21.03:0,21,213
chr10	84198553	.	CACAAA	C	4325.35	PASS	AB=0.931;AC=11;AF=0.196;AN=56;BaseQRankSum=7.624;DP=712;FS=0.448;HRun=0;HaplotypeScore=153.7649;InbreedingCoeff=0.8865;MQ=73.76;MQ0=1;MQRankSum=-7.332;QD=32.52;ReadPosRankSum=2.425;VQSLOD=4.4325;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,2841	1/1:0,9:9:27.09:513,27,0	0/0:33,0:27:62:0,62,1651	0/0:32,0:29:55.91:0,56,1154	0/0:25,0:25:69.24:0,69,2050	0/0:17,0:17:51.18:0,51,1513	0/0:34,0:34:90.31:0,90,2557	0/0:31,0:31:75.26:0,75,2074	0/0:21,0:21:54.19:0,54,1483	1/1:8,28:36:81.25:1519,81,0	1/1:3,16:19:45.15:893,45,0	0/0:23,0:23:66.23:0,66,1833	0/0:21,0:21:54.19:0,54,1597	0/0:23,0:23:57.20:0,57,1628	0/0:37,0:37:99:0,102,2810	1/1:6,14:20:33.11:655,33,0	1/1:6,16:22:34.09:711,34,0	0/0:18,0:18:45.15:0,45,1249	0/0:18,0:18:42.14:0,42,1193	0/0:22,0:22:60.20:0,60,1665	0/0:37,0:37:90.30:0,90,2592	0/0:23,0:23:54.19:0,54,1494	0/0:21,0:21:45.15:0,45,1279	0/0:35,0:35:99:0,99,2861	0/0:18,0:18:45.15:0,45,1311	0/1:25,2:27:34.76:35,0,1937	0/0:34,0:34:93.32:0,93,2736	0/0:19,0:19:51.18:0,51,1523
chr10	84198948	.	A	AG	8977.66	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-5.872;DP=581;FS=7.012;HRun=7;HaplotypeScore=64.7725;InbreedingCoeff=0.9953;MQ=80.75;MQ0=0;MQRankSum=-1.634;QD=29.15;ReadPosRankSum=-2.327;VQSLOD=4.5167;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:78.11:0,78,752	1/1:4,6:10:21.06:247,21,0	0/0:18,0:18:21.37:0,21,184	0/0:11,0:11:26.99:0,27,245	0/0:18,0:18:42.06:0,42,406	0/0:11,0:11:27.04:0,27,261	1/1:5,25:30:72.22:869,72,0	1/1:8,23:31:61.04:709,61,0	0/0:14,0:14:42.05:0,42,400	1/1:3,15:18:42.13:507,42,0	1/1:2,20:22:48.15:579,48,0	0/0:24,0:24:63.10:0,63,608	0/0:17,0:17:51.08:0,51,492	0/0:22,0:22:57.09:0,57,550	1/1:1,14:15:42.13:504,42,0	1/1:3,20:23:63.18:751,63,0	1/1:2,29:31:81.25:979,81,0	0/0:24,0:24:66.06:0,66,629	1/1:3,18:21:54.14:638,54,0	1/1:2,7:9:18.06:217,18,0	1/1:6,43:49:99:1444,120,0	0/0:17,0:17:48.08:0,48,463	0/0:13,0:13:36.06:0,36,348	0/0:29,0:29:72.09:0,72,689	0/0:20,0:20:51.08:0,51,492	1/1:4,21:25:66.20:787,66,0	1/1:2,16:18:48.13:566,48,0	1/1:0,6:6:15.05:181,15,0
chr10	84199492	.	CTCCTGGCTCACAGG	C	6876.78	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.850;DP=681;FS=0.000;HRun=0;HaplotypeScore=265.9732;InbreedingCoeff=0.9998;MQ=84.09;MQ0=0;MQRankSum=-11.137;QD=79.04;ReadPosRankSum=3.732;VQSLOD=4.3155;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,23:32:51.18:2094,51,0	0/0:13,0:13:33.11:0,33,2201	0/0:28,0:27:81.28:0,81,3773	0/0:23,0:23:60:0,60,3411	0/0:19,0:19:54.19:0,54,3539	0/0:18,0:18:54.19:0,54,3437	0/0:27,0:27:72.23:0,72,4161	0/0:22,0:22:66.21:0,66,3437	0/0:36,0:36:99:0,108,7155	0/0:19,0:19:51.17:0,51,3288	0/0:18,0:18:45.14:0,45,2815	0/0:38,0:38:99:0,114,7375	0/0:27,0:27:78.27:0,78,5182	0/0:24,0:24:72.25:0,72,4770	1/1:8,22:30:57.20:2463,57,0	0/0:43,0:43:99:0,120,7348	0/0:16,0:16:39.13:0,39,2660	0/0:15,0:15:45.11:0,45,2659	0/0:23,0:23:63.20:0,63,3286	0/0:19,0:19:54.19:0,54,3694	0/0:50,0:50:99:0,135,7899	0/0:24,0:24:72.25:0,72,4427	0/0:12,0:12:36.08:0,36,1895	0/0:27,0:27:78.27:0,78,5327	1/1:4,21:25:53.58:2320,54,0	0/0:19,0:19:57.20:0,57,3793	0/0:21,0:21:63.22:0,63,3813	0/0:13,0:13:39.13:0,39,2178
chr10	84199553	.	C	CGCTGGTG	24218.73	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-9.213;DP=654;FS=1.360;HRun=0;HaplotypeScore=159.8150;InbreedingCoeff=0.9834;MQ=66.52;MQ0=0;MQRankSum=-14.133;QD=80.73;ReadPosRankSum=-3.779;VQSLOD=4.2052;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:87.30:0,87,2172	1/1:4,6:13:27.09:992,27,0	0/0:14,0:14:32.58:0,33,579	0/0:8,0:8:15.81:0,16,388	0/0:24,0:24:66.20:0,66,1619	0/0:21,0:21:60.16:0,60,1403	1/1:9,20:35:78.27:3027,78,0	1/1:13,15:35:99:3179,105,0	0/0:29,0:29:78.25:0,78,1963	1/1:6,17:25:66.20:2298,66,0	1/1:5,10:19:27.09:1016,27,0	0/0:31,0:31:93.32:0,93,2347	0/0:35,0:35:93.30:0,93,2364	0/0:28,0:28:81.28:0,81,2096	0/0:28,0:28:75:0,75,1618	1/1:5,25:32:78.27:2884,78,0	1/1:1,17:19:51.17:1809,51,0	0/0:16,0:16:48.14:0,48,1163	1/1:5,11:23:69.18:1946,69,0	1/1:4,11:22:30.10:1078,30,0	1/1:9,12:29:39.60:1518,40,0	0/0:16,0:16:45.15:0,45,1149	0/0:16,0:16:48.16:0,48,1259	0/0:36,0:36:99:0,105,2646	0/0:16,0:16:33.07:0,33,807	1/1:3,14:22:63.20:2103,63,0	1/1:4,17:22:57.19:2126,57,0	1/1:1,1:4:6.02:242,6,0
chr10	84200112	.	GAAA	G	1359.16	PASS	AB=0.667;AC=14;AF=0.250;AN=56;BaseQRankSum=-2.770;DP=612;FS=8.468;HRun=16;HaplotypeScore=103.2183;InbreedingCoeff=0.6367;MQ=47.87;MQ0=44;MQRankSum=0.850;QD=6.26;ReadPosRankSum=-0.688;VQSLOD=-0.4124;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:40.97:0,41,225	0/0:8,0:10:4.49:0,4,41	0/0:37,0:7:2.73:0,3,17	0/0:55,0:6:8.64:0,9,54	0/0:26,0:24:41.24:0,41,354	0/0:14,0:14:29.15:0,29,308	1/1:8,8:15:8.79:68,9,0	1/1:25,17:41:42.97:376,43,0	0/0:15,0:14:32.82:0,33,361	0/0:21,0:19:12.66:0,13,81	0/1:11,1:19:10.90:11,0,69	0/0:13,0:13:26.86:0,27,290	0/0:14,0:10:20.21:0,20,163	0/0:11,0:12:23.29:0,23,274	0/0:13,0:13:2.96:0,3,7	0/0:9,0:15:9.29:0,9,47	0/1:21,2:39:17.07:92,0,17	0/0:20,0:19:39.66:0,40,360	1/1:17,18:35:37.91:446,38,0	1/1:22,4:25:10.11:180,10,0	1/1:0,5:5:3.01:32,3,0	0/0:6,0:6:9.03:0,9,148	0/0:8,0:9:20.08:0,20,135	0/0:21,0:21:18.44:0,18,231	0/0:10,0:9:7.16:0,7,42	0/0:13,0:15:27.95:0,28,174	1/1:15,9:24:18.32:329,18,0	0/0:16,0:17:11.17:0,11,70
chr10	84200127	.	AAGAAG	A	877.33	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.036;DP=521;FS=10.772;HRun=0;HaplotypeScore=101.3213;InbreedingCoeff=0.7980;MQ=63.77;MQ0=20;MQRankSum=-2.708;QD=17.55;ReadPosRankSum=-0.734;VQSLOD=2.3444;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:31:60.97:728,61,0	0/0:7,0:7:2.81:0,3,177	0/0:43,0:16:44.53:0,45,663	0/0:53,0:13:20.73:0,21,296	0/0:21,0:20:17.19:0,17,565	0/0:13,0:13:12.39:0,12,508	0/0:13,0:12:11.77:0,12,111	0/0:40,0:40:80.65:0,81,1013	0/0:16,0:15:16.28:0,16,640	0/0:15,0:12:15.66:0,16,314	0/0:18,0:17:26.81:0,27,345	0/0:14,0:14:32.95:0,33,659	0/0:15,0:12:11.09:0,11,424	0/0:10,0:10:27.05:0,27,572	1/1:0,9:9:3.01:55,3,0	0/0:11,0:11:17.95:0,18,260	0/0:31,0:31:48.02:0,48,610	0/0:23,0:22:37.45:0,37,693	0/0:27,0:26:65.24:0,65,739	0/0:19,0:19:38.86:0,39,476	0/0:7,0:7:9.03:0,9,143	0/0:9,0:9:24.07:0,24,456	0/0:10,0:10:17.82:0,18,283	0/0:12,0:12:17.92:0,18,395	1/1:9,0:8:17.96:225,18,0	0/0:14,0:13:18.25:0,18,292	0/0:19,0:19:46.91:0,47,503	0/0:9,0:8:19.01:0,19,278
chr10	84200128	.	AG	A	469.30	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=5.329;DP=512;FS=3.918;HRun=1;HaplotypeScore=73.3860;InbreedingCoeff=0.6453;MQ=64.70;MQ0=20;MQRankSum=-4.326;QD=8.23;ReadPosRankSum=-0.551;VQSLOD=0.6518;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:31:65.29:436,65,0	0/1:7,0:7:5.02:5,0,34	0/0:43,0:16:36.73:0,37,317	0/0:52,1:13:6.65:0,7,135	0/0:17,0:16:15.99:0,16,246	0/0:14,0:13:10.70:0,11,184	0/0:13,0:12:10.87:0,11,60	0/0:39,0:39:68.98:0,69,498	0/0:13,0:12:16.63:0,17,272	0/0:15,1:13:18.19:0,18,149	0/0:16,1:16:24.18:0,24,130	0/0:14,0:14:35.14:0,35,307	0/0:15,0:12:10.64:0,11,171	0/0:9,0:9:26.16:0,26,218	1/1:9,0:9:2.74:12,3,0	0/0:11,0:11:18.95:0,19,123	0/0:33,1:33:32.23:0,32,242	0/0:21,0:20:26.38:0,26,245	0/0:29,0:28:70.96:0,71,439	0/0:19,0:19:35.62:0,36,222	0/0:8,0:8:11.78:0,12,86	0/0:10,0:10:26.96:0,27,247	0/0:9,1:10:0.06:0,0,94	0/0:12,0:12:20.63:0,21,192	1/1:9,0:8:17.90:146,18,0	0/0:10,1:10:15.11:0,15,109	0/0:18,0:18:30.62:0,31,190	0/0:9,0:8:9.12:0,9,82
chr10	84200267	.	C	CG	834.54	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=-5.717;DP=551;FS=3.910;HRun=4;HaplotypeScore=58.3297;InbreedingCoeff=0.9857;MQ=80.69;MQ0=1;MQRankSum=-0.540;QD=29.81;ReadPosRankSum=1.708;VQSLOD=3.8579;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,156,1731	./.	0/0:19,0:19:47.97:0,48,510	0/0:11,0:11:23.93:0,24,231	0/0:24,0:24:57.14:0,57,636	0/0:15,0:15:33.09:0,33,373	0/0:23,0:23:54.15:0,54,612	0/0:28,0:28:78.13:0,78,841	0/0:14,0:14:33.08:0,33,364	0/0:21,0:20:51.13:0,51,564	0/0:8,0:8:21.03:0,21,225	0/0:18,0:18:54.15:0,54,609	0/0:18,0:17:48.14:0,48,543	0/0:15,0:15:45.13:0,45,508	0/0:17,0:17:45.05:0,45,485	0/0:19,0:19:51.15:0,51,577	0/0:43,0:43:99:0,111,1236	0/0:19,0:19:54.12:0,54,599	0/0:30,0:30:78.18:0,78,855	0/0:10,0:10:30.01:0,30,305	0/0:30,0:30:87.22:0,87,966	0/0:12,0:12:30.08:0,30,340	0/0:7,0:7:21.06:0,21,238	0/0:24,0:24:66.17:0,66,738	0/0:16,0:16:48.13:0,48,537	1/1:2,19:21:57.17:747,57,0	0/0:24,0:23:69.13:0,69,754	1/1:1,6:7:15.05:205,15,0
chr10	84204329	.	TAC	T	336.91	PASS	AB=0.885;AC=16;AF=0.320;AN=50;BaseQRankSum=3.374;DP=541;FS=3.093;HRun=0;HaplotypeScore=74.4062;InbreedingCoeff=-0.0411;MQ=62.70;MQ0=22;MQRankSum=-0.145;QD=1.33;ReadPosRankSum=2.253;VQSLOD=1.1142;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:35:11.36:56,11,0	0/1:10,1:11:16.74:17,0,117	./.	./.	0/0:17,0:17:12.03:0,12,149	0/0:18,0:18:6.02:0,6,86	0/1:28,3:31:40.40:40,0,186	0/0:21,0:19:5.95:0,6,42	0/1:18,3:21:26.22:26,0,38	./.	0/1:13,2:14:49.44:49,0,91	0/0:16,0:16:18:0,18,185	1/1:8,1:9:6.01:64,6,0	0/0:12,0:12:5.99:0,6,48	0/0:20,0:21:9:0,9,78	0/1:19,1:21:28.33:28,0,114	0/1:18,2:19:14.20:14,0,150	0/1:15,2:18:51.65:52,0,168	0/0:20,0:19:13.19:0,13,111	0/0:16,0:16:12.01:0,12,128	0/0:29,0:28:8.63:0,9,88	0/1:14,4:18:52.42:52,0,71	0/1:11,1:12:17.19:17,0,158	0/1:18,4:21:20.18:20,0,97	1/1:14,0:17:11.36:56,11,0	0/0:17,0:17:11.91:0,12,94	0/0:17,0:17:14.99:0,15,136	0/0:6,0:5:2.99:0,3,24
chr10	84204371	.	C	CACACAG	4672.06	PASS	AB=0.945;AC=23;AF=0.411;AN=56;BaseQRankSum=-7.927;DP=662;FS=14.949;HRun=0;HaplotypeScore=140.9870;InbreedingCoeff=0.2999;MQ=59.63;MQ0=18;MQRankSum=0.656;QD=11.71;ReadPosRankSum=-3.011;VQSLOD=2.6175;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:29:53.62:199,0,54	0/1:14,0:14:99:125,0,100	0/0:22,0:9:26.98:0,27,240	0/0:24,0:20:59.97:0,60,585	0/0:20,0:20:29.95:0,30,255	0/0:17,0:17:29.95:0,30,286	0/1:33,0:33:99:399,0,183	1/1:30,0:28:66.64:566,67,0	0/0:14,0:14:29.98:0,30,295	1/1:19,0:18:35.92:320,36,0	0/1:14,0:13:99:132,0,147	0/0:25,0:25:53.53:0,54,489	0/0:24,0:24:56.83:0,57,482	0/0:13,0:13:32.95:0,33,270	1/1:11,30:44:9.50:256,10,0	0/1:20,0:20:99:246,0,127	0/1:28,0:27:86.03:354,0,86	0/0:28,0:28:57.23:0,57,724	1/1:17,0:16:18.75:314,19,0	0/1:29,0:30:18.05:420,0,18	1/1:40,0:39:49.72:554,50,0	0/0:28,0:28:50.84:0,51,454	0/0:17,0:17:32.97:0,33,374	0/0:31,0:30:62.91:0,63,579	0/1:15,0:13:66.92:116,0,67	1/1:4,0:30:36.82:601,37,0	0/1:3,0:23:23.61:24,0,29	1/1:1,0:10:3.01:48,3,0
chr10	84207888	.	GGT	G	730.90	PASS	AB=0.910;AC=14;AF=0.259;AN=54;BaseQRankSum=2.229;DP=519;FS=9.504;HRun=0;HaplotypeScore=87.4417;InbreedingCoeff=0.5512;MQ=59.89;MQ0=9;MQRankSum=-0.746;QD=6.25;ReadPosRankSum=2.883;VQSLOD=2.2095;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:39:6:0,6,53	0/0:7,0:7:3.01:0,3,42	./.	0/0:26,0:20:0:0,0,0	1/1:10,0:9:3:25,3,0	0/0:11,0:12:6:0,6,54	0/0:25,0:23:0:0,0,0	0/0:29,0:27:36.82:0,37,363	0/1:16,1:17:15:15,0,206	0/0:19,0:18:33.09:0,33,434	0/0:15,0:14:12.02:0,12,130	0/0:18,0:17:9.03:0,9,119	1/1:12,4:17:11.86:111,12,0	1/1:11,2:13:6.01:66,6,0	1/1:4,0:9:14.20:70,14,0	0/1:5,1:7:24.06:24,0,41	0/0:26,1:33:57.05:0,57,584	1/1:16,13:29:44.54:453,45,0	0/0:10,0:9:3.01:0,3,40	0/0:12,0:12:14.99:0,15,150	0/0:21,0:22:5.99:0,6,51	1/1:9,5:13:12.03:130,12,0	0/0:11,0:10:12.03:0,12,157	0/0:20,0:20:33.09:0,33,460	0/0:21,0:21:6:0,6,68	0/0:28,0:29:26.90:0,27,233	0/0:16,0:17:8.55:0,9,82	0/0:9,0:11:11.97:0,12,98
chr10	84207948	.	G	GGT	2007.40	PASS	AB=0.868;AC=40;AF=0.769;AN=52;BaseQRankSum=2.676;DP=433;FS=0.000;HRun=0;HaplotypeScore=109.8074;InbreedingCoeff=0.1322;MQ=60.83;MQ0=18;MQRankSum=-0.822;QD=6.23;ReadPosRankSum=-2.071;VQSLOD=2.9012;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:22:5.95:44,6,0	1/1:2,0:7:3.24:23,3,0	./.	0/0:45,0:23:3:0,3,34	0/0:11,0:15:11.65:0,12,86	0/1:12,1:14:21.86:22,0,172	1/1:19,0:17:11.97:111,12,0	0/1:21,0:18:13.19:13,0,14	0/1:10,0:10:23.95:24,0,133	1/1:9,0:13:14.83:115,15,0	./.	0/0:12,0:11:21.06:0,21,234	0/1:7,1:8:18.48:128,0,18	1/1:2,0:4:3:26,3,0	1/1:8,4:12:15.03:206,15,0	1/1:6,0:7:9:78,9,0	1/1:21,0:22:1.25:3,1,0	1/1:13,2:29:36:351,36,0	1/1:7,0:6:5.92:40,6,0	1/1:6,0:6:3:26,3,0	1/1:20,0:18:5.80:64,6,0	1/1:6,1:10:9:78,9,0	0/1:7,4:9:36.56:37,0,58	0/1:18,11:29:33.92:377,0,34	1/1:6,0:8:5.99:49,6,0	1/1:13,0:21:33.70:294,34,0	1/1:8,0:9:2.74:12,3,0	1/1:5,0:6:5.74:37,6,0
chr10	84208046	.	G	GA	1182.40	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.043;DP=537;FS=5.808;HRun=0;HaplotypeScore=83.7206;InbreedingCoeff=0.9649;MQ=92.61;MQ0=0;MQRankSum=-4.803;QD=34.78;ReadPosRankSum=1.611;VQSLOD=3.0092;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:66.22:925,66,0	0/0:8,0:8:21.07:0,21,294	0/0:25,0:25:72.14:0,72,894	0/0:25,0:25:66.21:0,66,899	0/0:17,0:17:42.14:0,42,576	0/0:18,0:18:54.16:0,54,735	0/0:34,0:34:99:0,99,1344	0/0:13,0:13:36.11:0,36,487	0/0:24,0:24:72.24:0,72,1005	0/0:16,0:16:42.14:0,42,577	0/0:9,0:9:24.05:0,24,314	0/0:32,0:32:93.31:0,93,1299	0/0:14,0:14:42.14:0,42,586	0/0:23,0:23:69.23:0,69,964	0/0:21,0:21:60.20:0,60,838	0/0:15,0:15:45.15:0,45,629	0/0:26,0:26:78.22:0,78,1050	0/0:21,0:21:57.14:0,57,758	0/0:8,0:8:24.08:0,24,335	0/0:4,0:4:9.03:0,9,126	0/0:49,0:48:99:0,141,1911	0/0:10,0:10:30.10:0,30,418	0/0:8,0:8:24.08:0,24,335	0/0:30,0:30:90.27:0,90,1236	1/1:0,10:10:27.09:379,27,0	0/0:22,0:22:57.19:0,57,792	0/0:12,0:10:33.11:0,33,455	0/0:19,0:19:57.19:0,57,793
chr10	84209839	.	C	CTT	1191.27	PASS	AB=0.681;AC=20;AF=0.357;AN=56;BaseQRankSum=2.329;DP=553;FS=0.417;HRun=12;HaplotypeScore=94.2511;InbreedingCoeff=0.3236;MQ=68.62;MQ0=0;MQRankSum=0.303;QD=4.71;ReadPosRankSum=-3.448;VQSLOD=-0.7434;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:45:91.34:0,91,395	1/1:1,0:4:7.49:26,7,0	0/0:17,0:17:11.29:0,11,82	0/0:12,0:11:12.32:0,12,75	0/0:18,0:20:32.29:0,32,272	0/0:23,0:27:37.87:0,38,360	0/1:11,0:25:21.66:22,0,62	0/1:6,0:24:24.85:120,0,25	0/0:13,0:14:38.76:0,39,344	0/1:11,0:18:20.27:20,0,59	1/1:5,1:13:19.41:135,19,0	0/0:20,0:21:35.69:0,36,375	0/0:17,0:17:38.97:0,39,354	0/0:22,0:22:41.90:0,42,382	0/0:4,0:24:46.58:0,47,202	1/1:5,0:19:27.91:106,28,0	0/1:7,0:21:45.77:46,0,51	0/0:13,0:15:8.73:0,9,248	0/1:8,0:16:8.30:51,0,8	0/1:7,0:18:28.13:80,0,28	0/1:7,1:21:26.55:82,0,27	0/1:17,0:17:10.79:11,0,266	0/0:23,0:25:37.70:0,38,338	0/0:20,0:23:59.18:0,59,499	0/0:4,0:17:27.66:0,28,134	1/1:5,15:23:47.01:491,47,0	1/1:7,0:22:1.30:62,1,0	1/1:2,6:12:16.05:128,16,0
chr10	84210200	.	AAAGGAAGGAAGG	A	9997.23	PASS	AB=0.747;AC=29;AF=0.518;AN=56;BaseQRankSum=11.365;DP=686;FS=0.407;HRun=0;HaplotypeScore=225.7725;InbreedingCoeff=0.7088;MQ=56.84;MQ0=3;MQRankSum=-9.413;QD=25.12;ReadPosRankSum=-0.931;VQSLOD=3.3973;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,18:31:15.01:438,15,0	1/1:6,8:14:15.01:438,15,0	0/1:24,0:15:15.17:15,0,88	0/0:20,0:15:3:0,3,69	0/0:26,0:26:69.24:0,69,3370	0/0:19,0:19:36.12:0,36,1630	1/1:21,9:30:15.05:514,15,0	1/1:15,0:15:3:29,3,0	0/0:26,0:26:65.56:0,66,2903	1/1:11,22:33:59.96:1091,60,0	1/1:10,12:22:29.90:629,30,0	0/0:21,0:21:39.13:0,39,2059	0/0:23,0:23:48.16:0,48,2367	0/0:19,0:19:48.16:0,48,2450	1/1:8,0:26:33.11:920,33,0	1/1:7,27:34:45.04:1568,45,0	0/1:13,16:29:48.24:456,0,48	0/0:33,0:33:56.78:0,57,2538	1/1:10,7:17:21.02:431,21,0	1/1:6,18:24:41.96:1115,42,0	1/1:14,12:26:3.01:39,3,0	0/0:28,0:28:63.22:0,63,3443	0/0:18,0:18:45.15:0,45,2305	0/0:34,0:34:66.23:0,66,3375	1/1:6,18:24:45.11:1326,45,0	0/1:8,1:25:47.33:47,0,1265	1/1:7,17:24:27.09:941,27,0	0/0:10,0:20:36.12:0,36,889
chr10	84212039	.	GGTGTGTGTGTGT	G	1278.67	PASS	AB=0.676;AC=9;AF=0.167;AN=54;BaseQRankSum=6.104;DP=605;FS=5.269;HRun=0;HaplotypeScore=193.4734;InbreedingCoeff=0.5600;MQ=70.17;MQ0=11;MQRankSum=-4.598;QD=13.90;ReadPosRankSum=1.071;VQSLOD=2.4423;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:22:3.01:0,3,47	1/1:8,0:9:3.01:51,3,0	./.	0/0:24,0:22:6.02:0,6,76	0/0:15,0:15:9.02:0,9,248	0/0:20,0:22:39.54:0,40,1252	0/0:30,0:30:30.03:0,30,888	0/0:28,0:28:17.34:0,17,381	0/0:16,0:15:21.53:0,22,966	1/1:21,5:26:12.06:331,12,0	1/1:8,4:11:3.01:99,3,0	0/0:21,0:21:24.06:0,24,1153	0/0:12,0:12:16.82:0,17,581	0/0:28,0:28:54.18:0,54,2248	0/0:16,0:16:21.07:0,21,1093	0/1:12,11:23:15.57:758,0,16	1/1:19,2:21:6.02:172,6,0	0/0:32,0:29:57.19:0,57,2451	0/0:23,0:20:14.44:0,14,308	0/0:11,0:11:0:0,0,0	0/0:45,0:44:15.92:0,16,513	0/0:19,0:19:12.03:0,12,433	0/0:7,0:7:3.01:0,3,125	0/0:36,0:36:54.19:0,54,2770	0/0:11,0:10:3.01:0,3,100	0/0:20,0:20:21.05:0,21,581	0/0:20,0:20:18.06:0,18,477	0/0:29,0:28:27.07:0,27,968
chr10	84212134	.	GCA	G	47.36	PASS	AB=1.000;AC=5;AF=0.100;AN=50;BaseQRankSum=3.776;DP=426;FS=34.546;HRun=0;HaplotypeScore=78.5590;InbreedingCoeff=0.5126;MQ=59.36;MQ0=11;MQRankSum=-2.128;QD=3.95;ReadPosRankSum=-3.418;VQSLOD=-0.2621;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.24:0,69,1354	0/0:6,0:6:15.52:0,16,271	0/0:15,0:10:17.80:0,18,347	0/0:28,0:21:40.63:0,41,643	0/0:13,0:13:33.08:0,33,600	0/0:12,0:12:27.09:0,27,512	./.	./.	0/0:12,0:12:33.11:0,33,658	0/0:20,0:20:54.01:0,54,1072	0/0:7,0:7:6.02:0,6,121	0/0:25,0:24:60.07:0,60,1143	0/0:22,0:22:66.18:0,66,1246	0/0:19,0:19:44.69:0,45,807	0/0:9,0:9:18.06:0,18,363	0/0:20,0:20:45.15:0,45,881	0/0:33,0:33:42.29:0,42,733	0/0:31,0:30:80.93:0,81,1519	1/1:2,3:3:9.01:101,9,0	./.	0/0:1,14:14:0:0,0,0	0/0:8,0:8:1:0,1,288	0/0:14,0:14:30.10:0,30,604	0/0:31,0:30:87.30:0,87,1742	0/0:13,0:13:18.06:0,18,334	0/0:21,0:21:4.04:0,4,890	1/1:0,4:4:2.97:38,3,0	0/1:3,0:3:14.97:15,0,39
chr10	84212313	.	A	AC	14141.47	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-14.627;DP=585;FS=0.995;HRun=0;HaplotypeScore=59.9296;InbreedingCoeff=0.9957;MQ=84.93;MQ0=1;MQRankSum=-1.474;QD=42.34;ReadPosRankSum=3.130;VQSLOD=5.4993;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:41:99:1573,99,0	1/1:0,12:12:21.07:321,21,0	0/0:26,0:24:68.93:0,69,838	0/0:23,0:21:52.88:0,53,600	0/0:12,0:12:36.12:0,36,500	0/0:19,0:19:57.19:0,57,795	1/1:0,33:33:90.31:1432,90,0	1/1:1,24:25:72.23:1107,72,0	0/0:16,0:16:45.13:0,45,602	1/1:0,12:12:36.12:574,36,0	1/1:0,5:5:15.05:240,15,0	0/0:38,0:38:99:0,111,1549	0/0:19,0:19:57.19:0,57,786	0/0:24,0:24:72.24:0,72,1000	1/1:1,28:29:81.28:1293,81,0	1/1:1,22:23:21.25:916,21,0	1/1:0,27:26:75.26:1197,75,0	0/0:24,0:24:72.24:0,72,1007	1/1:0,10:10:30.10:453,30,0	1/1:0,9:9:24.08:383,24,0	1/1:0,35:35:87.30:1389,87,0	0/0:12,0:12:36.06:0,36,462	0/0:7,0:7:21.07:0,21,292	0/0:31,0:31:90.26:0,90,1237	1/1:0,14:14:42.14:670,42,0	1/1:1,22:23:63.20:972,63,0	1/1:0,18:19:51.17:807,51,0	1/1:0,17:17:51.17:813,51,0
chr10	84213246	.	G	GA	8965.28	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-14.390;DP=504;FS=3.943;HRun=2;HaplotypeScore=50.3588;InbreedingCoeff=0.9946;MQ=87.59;MQ0=0;MQRankSum=-5.619;QD=38.81;ReadPosRankSum=0.393;VQSLOD=5.2357;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,45:46:99:1814,126,0	0/0:9,0:9:27.08:0,27,335	0/0:19,0:19:41.81:0,42,448	0/0:17,0:17:41.48:0,41,466	0/0:7,0:7:15.05:0,15,186	0/0:14,0:14:42.13:0,42,520	1/1:0,32:32:84.28:1210,84,0	1/1:0,15:15:45.14:631,45,0	0/0:19,0:19:54.17:0,54,668	0/0:13,0:13:33.10:0,33,409	0/0:7,0:7:14.80:0,15,186	0/0:20,0:20:60.16:0,60,710	0/0:15,0:15:45.14:0,45,557	0/0:15,0:15:45.13:0,45,545	1/1:0,12:12:36.12:518,36,0	0/0:16,0:16:48.15:0,48,595	0/0:33,0:33:99:0,99,1211	0/0:20,0:20:60.16:0,60,727	1/1:1,8:9:24.07:328,24,0	1/1:1,14:15:42.14:598,42,0	1/1:2,31:33:90.30:1296,90,0	0/0:16,0:16:48.13:0,48,571	0/0:13,0:13:39.10:0,39,469	0/0:20,0:20:57.18:0,57,706	1/1:1,20:21:57.19:820,57,0	1/1:1,10:11:30.07:394,30,0	1/1:2,25:27:69.22:968,69,0	1/1:0,10:10:27.09:389,27,0
chr10	84214380	.	TG	T	839.87	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.649;DP=440;FS=8.361;HRun=2;HaplotypeScore=50.4484;InbreedingCoeff=0.7716;MQ=76.73;MQ0=1;MQRankSum=0.672;QD=33.59;ReadPosRankSum=0.574;VQSLOD=2.9731;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:72.23:935,72,0	0/0:3,0:3:6.02:0,6,90	0/0:20,0:20:51.16:0,51,732	0/0:16,0:16:37.75:0,38,618	0/0:13,0:13:27.56:0,28,404	0/0:13,0:13:39.13:0,39,583	0/0:23,0:23:66.20:0,66,966	0/0:23,0:23:60.19:0,60,881	0/0:10,0:10:30.09:0,30,431	0/0:14,0:14:42.14:0,42,628	0/0:8,0:8:21.07:0,21,315	0/0:12,0:12:36.12:0,36,540	0/0:12,0:12:36.12:0,36,538	0/0:8,0:8:24.08:0,24,359	0/0:21,0:21:57.19:0,57,852	0/0:18,0:18:54.15:0,54,750	0/0:25,0:25:75.25:0,75,1120	0/0:12,0:12:36.10:0,36,519	0/0:22,0:22:66.16:0,66,941	0/0:4,0:4:6.02:0,6,89	0/0:48,0:48:99:0,144,2068	0/0:17,0:17:48.15:0,48,697	0/0:5,0:5:15.05:0,15,225	0/0:15,0:15:45.15:0,45,674	0/0:13,0:13:39.13:0,39,584	0/0:22,0:22:60.19:0,60,881	0/0:12,0:12:33.11:0,33,493	0/0:6,0:5:9.03:0,9,132
chr10	84214438	.	GC	G	1139.74	PASS	AB=0.815;AC=21;AF=0.375;AN=56;BaseQRankSum=8.468;DP=374;FS=0.000;HRun=11;HaplotypeScore=50.8790;InbreedingCoeff=0.4740;MQ=72.18;MQ0=2;MQRankSum=0.638;QD=6.30;ReadPosRankSum=1.765;VQSLOD=1.1257;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,1:22:20.41:0,20,400	0/0:3,0:3:3:0,3,25	1/1:15,0:13:0.19:29,0,0	0/1:13,0:10:13.88:14,0,34	0/0:11,0:12:26.86:0,27,251	0/0:16,0:16:39.08:0,39,406	0/0:17,1:18:5.22:0,5,238	1/1:12,7:19:14.91:123,15,0	0/0:12,0:12:3.70:0,4,227	0/0:9,0:9:18.05:0,18,192	0/0:10,1:11:14.97:0,15,137	0/0:7,0:7:21.05:0,21,224	0/0:6,0:6:12.03:0,12,128	0/1:6,1:7:6.59:7,0,142	1/1:0,0:20:38.70:112,39,0	0/0:12,0:12:33.06:0,33,338	0/0:19,0:20:20.38:0,20,406	0/0:13,1:15:17.27:0,17,363	1/1:3,16:19:17.66:330,18,0	0/1:2,5:7:10.05:83,0,10	0/0:23,1:24:10.74:0,11,466	0/1:8,1:9:36.66:37,0,44	0/0:6,0:6:15.03:0,15,152	0/1:8,6:15:88.94:136,0,89	1/1:1,10:11:17.96:148,18,0	1/1:3,0:18:29.44:98,29,0	1/1:5,9:17:1.10:183,1,0	1/1:2,0:9:10.19:29,10,0
chr10	84214572	.	GTACACACA	G	1729.25	PASS	AB=0.907;AC=10;AF=0.179;AN=56;BaseQRankSum=6.868;DP=480;FS=2.916;HRun=0;HaplotypeScore=132.0965;InbreedingCoeff=0.0067;MQ=53.81;MQ0=10;MQRankSum=-5.158;QD=12.26;ReadPosRankSum=-0.016;VQSLOD=2.4327;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:26.49:0,26,206	0/0:9,0:9:17.97:0,18,292	0/0:26,0:4:11.69:0,12,71	0/0:27,0:2:3:0,3,25	0/0:19,0:18:44.29:0,44,702	0/0:18,0:18:45.08:0,45,1338	0/1:12,0:12:13.88:14,0,144	0/0:22,0:21:62.87:0,63,540	0/1:15,0:15:24.07:24,0,340	0/0:24,0:24:68.99:0,69,1208	0/0:18,0:18:39.04:0,39,649	0/0:14,0:14:36.55:0,37,1072	0/0:9,0:9:24.95:0,25,885	0/0:17,0:17:39.11:0,39,1201	0/1:13,0:21:90.19:243,0,90	0/0:9,0:9:24.07:0,24,427	0/0:20,0:20:54.11:0,54,1195	0/0:21,0:21:45:0,45,1340	0/1:18,0:18:58.55:59,0,307	0/1:16,0:16:73.49:73,0,203	0/0:15,0:15:11.99:0,12,100	0/0:12,0:12:33.07:0,33,932	0/0:18,0:17:47.95:0,48,1612	0/0:19,0:19:42.11:0,42,1400	0/1:14,0:14:99:125,0,108	1/1:1,16:17:47.83:762,48,0	0/1:18,0:18:80.86:324,0,81	0/1:1,8:9:81.43:255,0,81
chr10	84214573	.	TAC	T	1369.62	PASS	AB=0.875;AC=34;AF=0.708;AN=48;BaseQRankSum=7.750;DP=486;FS=5.657;HRun=0;HaplotypeScore=91.7091;InbreedingCoeff=0.1700;MQ=52.24;MQ0=10;MQRankSum=-3.291;QD=4.19;ReadPosRankSum=0.275;VQSLOD=2.0474;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:23:0:0,0,0	1/1:7,1:9:5.85:46,6,0	./.	./.	0/0:14,0:18:14.78:0,15,128	0/1:13,4:17:37.99:38,0,238	1/1:13,0:13:2.84:14,3,0	./.	1/1:8,0:15:17.04:102,17,0	1/1:21,3:24:12.02:130,12,0	1/1:12,6:18:11.78:130,12,0	0/0:13,0:14:6.20:0,6,184	0/1:9,0:9:9.20:9,0,204	0/1:12,5:17:70.51:71,0,195	1/1:21,0:22:25.82:144,26,0	1/1:5,1:9:11.51:66,12,0	1/1:10,10:21:13.06:257,13,0	0/1:17,4:21:21.34:21,0,298	1/1:21,0:21:8.52:42,9,0	1/1:17,0:17:8.52:42,9,0	./.	0/1:13,0:13:14.37:14,0,177	0/0:16,1:17:0.38:0,0,358	0/1:15,4:19:78.64:79,0,279	1/1:15,0:15:11.36:56,11,0	1/1:18,0:16:16.33:74,16,0	1/1:20,0:20:28.41:139,28,0	1/1:9,0:9:8.52:42,9,0
chr10	84214605	.	CACACACACACACAT	C	3064.20	PASS	AB=0.840;AC=11;AF=0.196;AN=56;BaseQRankSum=5.752;DP=578;FS=0.547;HRun=0;HaplotypeScore=214.9581;InbreedingCoeff=0.6150;MQ=54.88;MQ0=7;MQRankSum=-3.668;QD=24.51;ReadPosRankSum=0.545;VQSLOD=2.0335;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:50.17:0,50,784	0/0:9,0:9:21.06:0,21,789	0/0:28,0:14:32.08:0,32,376	0/0:27,0:11:32.61:0,33,327	0/0:20,0:19:41.64:0,42,1613	0/0:19,0:18:48.15:0,48,2381	1/1:3,15:18:5.88:143,6,0	0/1:17,0:16:40.04:354,0,40	0/0:15,0:15:33.08:0,33,866	0/0:23,0:23:69.18:0,69,2045	0/0:15,0:15:26.85:0,27,1018	0/0:23,0:23:60.09:0,60,2031	0/0:18,0:18:48.97:0,49,2068	0/0:21,0:21:42.13:0,42,1900	0/0:25,0:25:52.64:0,53,1586	0/0:15,0:15:39.12:0,39,1504	0/0:25,0:25:66.13:0,66,2354	0/0:29,0:29:78.13:0,78,2769	0/1:4,13:17:18.25:546,0,18	1/1:2,10:12:9.03:386,9,0	1/1:21,0:21:18.46:173,18,0	0/0:14,0:14:33.10:0,33,1538	0/0:18,0:17:48.12:0,48,2439	0/0:26,0:26:71.98:0,72,2642	0/1:20,1:21:33.83:318,0,34	0/0:33,0:32:23.74:0,24,1199	1/1:4,15:19:36.04:1306,36,0	0/0:14,0:14:29.99:0,30,374
chr10	84214607	.	CACACACACACAT	C	2588.01	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=6.779;DP=564;FS=0.551;HRun=0;HaplotypeScore=196.6094;InbreedingCoeff=0.7271;MQ=56.03;MQ0=6;MQRankSum=-3.809;QD=22.50;ReadPosRankSum=0.842;VQSLOD=2.9369;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:44.16:0,44,567	0/0:9,0:9:21.04:0,21,635	0/0:26,0:15:34.74:0,35,360	0/0:23,0:12:35.59:0,36,326	0/0:19,0:18:41.64:0,42,1400	0/0:19,0:18:48.15:0,48,2034	1/1:15,0:15:3.01:95,3,0	0/1:18,0:17:26.91:348,0,27	0/0:15,0:15:32.41:0,32,635	0/0:23,0:23:66.15:0,66,1635	0/0:15,0:15:23.90:0,24,825	0/0:22,0:22:57.09:0,57,1764	0/0:19,0:19:51.95:0,52,1825	0/0:21,0:21:45.11:0,45,1632	0/0:26,0:26:52.40:0,52,1228	0/0:15,0:15:39.12:0,39,1247	0/0:25,0:25:66.13:0,66,2021	0/0:29,0:29:78.03:0,78,2365	0/1:15,0:15:27.54:446,0,28	1/1:11,0:11:9.03:285,9,0	1/1:18,0:18:17.89:149,18,0	0/0:14,0:14:33.10:0,33,1295	0/0:18,0:17:48.12:0,48,2121	0/0:26,0:26:71.93:0,72,2266	1/1:4,16:20:15.52:477,16,0	0/0:33,0:32:47.02:0,47,779	1/1:17,0:18:32.94:959,33,0	0/0:16,0:16:35.41:0,35,327
chr10	84215367	.	G	GGTGTGT	1665.70	PASS	AB=1.000;AC=15;AF=0.300;AN=50;BaseQRankSum=6.620;DP=539;FS=4.338;HRun=0;HaplotypeScore=132.0919;InbreedingCoeff=0.7274;MQ=66.05;MQ0=6;MQRankSum=-3.945;QD=13.54;ReadPosRankSum=-0.675;VQSLOD=2.6379;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:9,0:9:16.99:0,17,330	0/0:25,0:13:7.84:0,8,104	0/0:24,0:19:8.01:0,8,251	0/0:21,0:21:36.04:0,36,711	0/0:16,0:16:33.11:0,33,609	1/1:20,0:19:12.04:257,12,0	1/1:17,0:16:6.02:123,6,0	0/0:22,0:21:5.90:0,6,581	0/0:35,0:35:75.17:0,75,1284	0/0:15,0:14:21.49:0,21,354	0/0:17,0:17:36.11:0,36,653	0/0:19,0:19:36.12:0,36,723	0/0:26,0:26:48.15:0,48,914	./.	0/0:26,0:23:48.13:0,48,903	0/0:29,0:29:43.65:0,44,702	0/0:11,0:13:33.11:0,33,649	1/1:11,0:11:14.97:278,15,0	1/1:13,0:13:3.01:54,3,0	1/1:17,0:18:5.97:74,6,0	0/0:30,0:29:54.17:0,54,1048	0/0:19,0:19:36.12:0,36,740	0/0:28,0:27:39.01:0,39,725	./.	0/1:25,0:24:24.16:814,0,24	1/1:12,0:12:3.01:55,3,0	1/1:7,0:7:9.03:178,9,0
chr10	84215387	.	TGAGAGA	T	297.80	PASS	AB=0.892;AC=9;AF=0.214;AN=42;BaseQRankSum=3.956;DP=515;FS=22.390;HRun=0;HaplotypeScore=127.1376;InbreedingCoeff=0.2512;MQ=50.25;MQ0=16;MQRankSum=-2.693;QD=2.44;ReadPosRankSum=-3.275;VQSLOD=-0.2248;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:11,0:10:9.47:0,9,95	./.	./.	0/0:21,0:21:26.95:0,27,485	0/1:24,0:24:25.70:26,0,245	0/0:22,0:21:5.76:0,6,54	0/0:15,0:13:20.81:0,21,171	0/0:24,0:23:33.04:0,33,650	0/0:33,0:33:44.47:0,44,547	0/0:16,0:14:12.04:0,12,189	0/0:18,0:18:18.04:0,18,331	0/1:15,7:22:21.05:21,0,113	0/1:15,5:21:27.70:28,0,190	./.	0/0:30,0:28:35.10:0,35,456	0/0:29,0:28:29.29:0,29,226	0/1:11,1:12:67.95:68,0,69	0/0:9,0:6:3.01:0,3,41	0/1:12,0:12:0:0,0,0	./.	0/0:29,0:29:0.80:0,1,112	0/0:16,0:16:8.99:0,9,75	0/0:33,0:33:17.84:0,18,770	./.	1/1:21,1:21:10.83:82,11,0	./.	1/1:5,3:9:12.04:201,12,0
chr10	84215426	.	GAC	G	1256.08	PASS	AB=0.973;AC=15;AF=0.313;AN=48;BaseQRankSum=5.945;DP=430;FS=11.708;HRun=0;HaplotypeScore=80.5078;InbreedingCoeff=0.3378;MQ=43.65;MQ0=37;MQRankSum=0.689;QD=6.13;ReadPosRankSum=-0.423;VQSLOD=2.0831;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:11,0:8:9.68:66,10,0	0/0:23,0:6:14.74:0,15,95	0/0:18,0:3:4.18:0,4,37	0/1:13,0:13:3.37:3,0,186	0/1:27,0:26:22.55:23,0,258	0/1:14,0:12:0:0,0,0	0/0:20,0:11:8.78:0,9,59	0/0:19,0:18:28:0,28,385	1/1:25,1:25:35.42:399,35,0	1/1:18,0:16:27.83:235,28,0	0/1:14,1:15:2.82:3,0,175	0/1:18,0:18:2.60:3,0,158	0/0:21,0:21:17.36:0,17,180	0/0:6,0:5:2.94:0,3,18	0/1:24,3:26:58.42:225,0,58	1/1:24,1:24:41.86:436,42,0	0/0:9,0:9:13.83:0,14,127	0/0:15,0:10:4.98:0,5,40	0/0:9,0:9:5.74:0,6,30	./.	0/0:17,0:16:24.33:0,24,222	0/0:8,0:8:13.17:0,13,93	0/0:33,0:33:55.14:0,55,617	./.	0/1:10,0:9:14.77:15,0,48	./.	0/0:7,0:5:5.21:0,5,23
chr10	84215465	.	A	AGT	1137.79	PASS	AB=0.911;AC=18;AF=0.375;AN=48;BaseQRankSum=3.128;DP=424;FS=5.141;HRun=0;HaplotypeScore=84.5101;InbreedingCoeff=0.6231;MQ=50.37;MQ0=12;MQRankSum=0.830;QD=7.59;ReadPosRankSum=-1.224;VQSLOD=2.1846;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:12,0:10:23.92:212,24,0	0/0:44,0:17:8.92:0,9,69	0/0:31,0:12:8.57:0,9,58	0/0:11,0:11:17.95:0,18,150	0/0:29,0:29:53.53:0,54,467	1/1:11,0:7:0.31:1,0,0	1/1:7,0:3:5.88:36,6,0	0/0:17,0:19:38.62:0,39,348	1/1:24,0:24:20.83:296,21,0	1/1:12,0:12:13.27:193,13,0	0/0:15,0:15:23.56:0,24,238	0/0:17,0:17:36.82:0,37,294	0/0:18,0:17:24.89:0,25,274	./.	0/1:14,17:30:70.16:210,0,70	1/1:20,2:22:26.93:301,27,0	0/0:9,0:9:17.97:0,18,163	1/1:7,0:6:2.98:21,3,0	0/1:11,0:10:0:0,0,0	0/0:5,0:4:0:0,0,0	0/0:17,0:17:32.43:0,32,287	0/0:13,0:13:27.01:0,27,268	0/0:33,0:31:53.37:0,53,508	0/1:4,0:4:0:0,0,0	0/1:8,0:6:19.16:26,0,19	./.	./.
chr10	84215489	.	TGA	T	58.25	PASS	AB=0.982;AC=12;AF=0.286;AN=42;BaseQRankSum=0.119;DP=457;FS=12.591;HRun=0;HaplotypeScore=65.9012;InbreedingCoeff=-0.1190;MQ=46.40;MQ0=22;MQRankSum=1.670;QD=0.26;ReadPosRankSum=-1.000;VQSLOD=0.2216;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/1:15,0:13:3.98:4,0,88	./.	./.	0/0:15,0:15:20.99:0,21,279	0/0:27,0:25:30.20:0,30,329	0/1:12,0:7:0:0,0,0	./.	0/0:20,0:20:0.61:0,1,412	0/1:28,0:22:4.15:4,0,219	0/1:21,0:21:25.71:26,0,121	0/1:13,1:14:2.42:2,0,306	0/0:21,0:21:38.57:0,39,380	0/1:21,0:19:17.75:18,0,336	./.	0/0:24,0:23:6.25:0,6,321	0/0:30,0:30:13.44:0,13,408	0/0:8,0:8:18.02:0,18,233	0/0:11,0:7:8.15:0,8,39	0/1:11,0:10:0:0,0,0	1/1:16,0:13:0.89:2,1,0	0/1:22,1:23:29.12:29,0,208	0/1:23,1:23:68.26:68,0,259	0/1:35,1:35:12.16:12,0,551	./.	0/0:6,0:5:3.40:0,3,18	0/0:7,0:4:5.82:0,6,37	./.
chr10	84215512	.	GAC	G	64.27	PASS	AB=0.967;AC=15;AF=0.313;AN=48;BaseQRankSum=5.931;DP=481;FS=4.159;HRun=0;HaplotypeScore=78.1593;InbreedingCoeff=0.4444;MQ=47.72;MQ0=26;MQRankSum=-0.698;QD=0.49;ReadPosRankSum=-0.887;VQSLOD=1.4458;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/1:12,0:10:48.07:48,0,53	./.	./.	0/0:21,0:21:29.38:0,29,532	0/0:23,0:21:4.49:0,4,373	0/1:8,2:5:0:0,0,0	1/1:8,0:3:5.93:40,6,0	0/0:22,0:22:29.44:0,29,591	0/1:31,0:27:17.73:18,0,490	0/0:23,1:24:27.59:0,28,265	0/0:21,0:20:17.45:0,17,387	0/0:21,0:20:23.21:0,23,503	0/0:24,0:22:24.34:0,24,526	0/1:5,0:5:0:0,0,0	0/0:28,0:27:32.29:0,32,575	0/0:32,2:34:52.94:0,53,672	0/0:8,0:8:24.05:0,24,346	1/1:8,0:5:2.32:16,2,0	1/1:8,3:10:0.21:5,0,0	0/1:38,0:34:2.39:2,0,79	0/0:24,0:24:12.72:0,13,324	0/0:27,0:26:25.10:0,25,394	0/0:41,1:40:16.12:0,16,921	1/1:3,0:2:2.99:24,3,0	1/1:5,0:4:7.17:42,7,0	0/0:10,0:7:1.26:0,1,4	./.
chr10	84215530	.	GAC	G	631.28	PASS	AB=1.000;AC=14;AF=0.269;AN=52;BaseQRankSum=6.706;DP=563;FS=1.495;HRun=0;HaplotypeScore=91.7190;InbreedingCoeff=0.6107;MQ=49.97;MQ0=27;MQRankSum=-0.688;QD=4.15;ReadPosRankSum=-2.235;VQSLOD=1.5824;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/1:13,0:11:14.66:15,0,166	./.	0/0:35,0:8:12.50:0,12,67	0/0:21,0:21:48.98:0,49,873	0/0:19,0:17:34.09:0,34,488	1/1:13,2:13:8.38:85,8,0	1/1:12,0:10:3.85:27,4,0	0/0:24,0:24:50.84:0,51,743	0/0:37,1:35:71.06:0,71,1358	0/0:27,0:27:23.17:0,23,723	0/0:22,0:21:36.97:0,37,617	0/1:21,0:20:0.60:1,0,690	0/0:23,0:21:57.06:0,57,929	0/1:8,0:8:0:0,0,0	0/0:34,0:33:74.58:0,75,951	0/0:30,0:30:70.08:0,70,1162	0/0:13,0:13:35.60:0,36,443	1/1:3,6:6:17.96:220,18,0	1/1:10,1:10:9.02:116,9,0	0/1:50,0:48:8.09:8,0,16	0/0:28,0:28:53.97:0,54,841	0/0:22,0:21:45.12:0,45,760	0/0:44,0:43:80.55:0,81,1440	0/0:3,0:3:5.99:0,6,50	0/0:6,0:6:11.78:0,12,102	1/1:10,3:11:25.24:318,25,0	0/0:4,0:3:2.92:0,3,17
chr10	84215532	.	CAGAG	C	879.85	PASS	AB=1.000;AC=17;AF=0.315;AN=54;BaseQRankSum=8.443;DP=563;FS=5.648;HRun=0;HaplotypeScore=105.8687;InbreedingCoeff=0.7739;MQ=50.16;MQ0=25;MQRankSum=-2.656;QD=6.52;ReadPosRankSum=-1.969;VQSLOD=1.8727;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:6:0:0,0,0	0/0:13,0:11:26.84:0,27,362	./.	0/0:36,0:8:10.26:0,10,116	0/0:21,0:21:54:0,54,1095	0/0:20,0:18:33.03:0,33,474	1/1:15,0:13:8.42:106,8,0	1/1:1,0:10:16.77:129,17,0	0/0:23,0:23:45.06:0,45,794	0/0:40,0:37:99:0,103,1968	0/0:26,0:26:42.67:0,43,976	0/0:22,0:21:42.05:0,42,795	0/0:21,0:20:47.41:0,47,929	0/0:23,0:21:57.14:0,57,1132	0/1:8,0:8:0.08:0,0,0	0/0:32,0:32:69.12:0,69,1222	0/0:27,0:27:69.20:0,69,1595	0/0:12,0:12:33.07:0,33,668	1/1:9,0:6:17.86:155,18,0	1/1:11,0:10:8.90:85,9,0	1/1:3,46:47:17.98:287,18,0	0/0:27,0:27:51.16:0,51,1159	0/0:23,0:22:42.12:0,42,983	0/0:45,0:44:99:0,111,2244	0/0:3,0:3:0.47:0,0,1	0/1:6,0:6:14.50:25,0,15	1/1:14,0:12:26.95:252,27,0	1/1:3,0:3:3.40:18,3,0
chr10	84215568	.	C	CGG	1717.73	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.089;DP=680;FS=8.722;HRun=0;HaplotypeScore=129.9025;InbreedingCoeff=0.9805;MQ=63.19;MQ0=10;MQRankSum=-3.003;QD=24.19;ReadPosRankSum=-1.776;VQSLOD=3.6830;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:18.06:340,18,0	0/0:8,0:8:24.05:0,24,339	0/0:48,0:29:76.33:0,76,1046	0/0:52,0:35:38.12:0,38,616	0/0:15,0:15:42.13:0,42,657	0/0:15,0:15:33.09:0,33,530	0/0:20,0:20:21.10:0,21,342	0/0:23,0:23:66.23:0,66,1064	0/0:18,0:18:39.11:0,39,610	0/0:36,0:35:99:0,99,1415	0/0:17,0:17:48.14:0,48,732	0/0:28,0:28:63.15:0,63,951	0/0:24,0:23:63.06:0,63,936	0/0:22,0:22:54.15:0,54,851	1/1:3,0:16:13.69:122,14,0	0/0:30,0:30:84.29:0,84,1350	0/0:27,0:27:69.07:0,69,1030	0/0:14,0:14:42.13:0,42,658	0/0:22,0:21:63.17:0,63,997	0/0:9,0:8:18.05:0,18,293	0/0:70,0:70:45.15:0,45,734	0/0:28,0:28:78.22:0,78,1193	0/0:20,0:20:54.14:0,54,804	0/0:43,0:42:99:0,120,1723	1/1:2,7:9:12.04:241,12,0	1/1:4,17:20:48.05:834,48,0	0/0:18,0:16:45.15:0,45,748	1/1:0,6:6:18.06:350,18,0
chr10	84215618	.	AGTGT	A	2873.20	PASS	AB=0.808;AC=18;AF=0.321;AN=56;BaseQRankSum=4.385;DP=766;FS=15.512;HRun=0;HaplotypeScore=161.1604;InbreedingCoeff=0.8781;MQ=53.60;MQ0=28;MQRankSum=-5.151;QD=11.78;ReadPosRankSum=-0.739;VQSLOD=1.7950;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:38.69:0,39,546	0/0:11,0:11:20.69:0,21,289	0/0:57,0:13:13.60:0,14,129	0/0:77,0:26:24.67:0,25,289	0/0:18,0:17:45.15:0,45,1048	0/0:22,0:21:30.10:0,30,684	1/1:9,16:24:11.36:161,11,0	1/1:12,16:24:45.04:579,45,0	0/0:25,0:25:42.42:0,42,816	0/0:26,0:27:69.19:0,69,1438	0/1:13,0:13:3.71:4,0,378	0/0:23,0:28:52.13:0,52,1006	0/0:25,0:27:70.27:0,70,1354	0/0:21,0:20:42.13:0,42,940	0/0:27,0:27:23.59:0,24,427	0/0:33,0:34:59.90:0,60,1269	0/0:22,0:23:7.29:0,7,1016	0/0:17,0:17:26.81:0,27,539	1/1:18,2:17:28.02:364,28,0	1/1:3,12:14:12.02:201,12,0	1/1:55,12:63:47.75:680,48,0	0/0:27,0:30:68.52:0,69,1321	0/0:16,0:16:42.12:0,42,867	0/0:32,0:32:51.17:0,51,1174	0/1:6,0:16:0.02:0,0,1	1/1:21,0:27:30.95:240,31,0	1/1:11,14:24:48.15:790,48,0	1/1:5,0:6:10.85:54,11,0
chr10	84215639	.	GTC	G	595.86	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=7.296;DP=746;FS=5.225;HRun=0;HaplotypeScore=140.7882;InbreedingCoeff=0.2315;MQ=47.70;MQ0=36;MQRankSum=-3.532;QD=2.55;ReadPosRankSum=-2.594;VQSLOD=2.0524;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:32.76:0,33,443	0/0:8,0:7:3.98:0,4,162	0/0:27,0:4:4.72:0,5,31	0/0:44,0:9:20.52:0,21,164	0/0:22,1:21:55.24:0,55,817	0/0:19,0:18:35.99:0,36,571	0/1:24,0:23:17.18:17,0,37	0/1:30,0:23:80.34:80,0,120	0/0:20,5:25:39.90:0,40,629	0/0:37,0:35:87.23:0,87,1190	0/1:17,0:17:20.55:21,0,309	0/0:29,0:28:23.41:0,23,700	0/0:31,0:30:29.92:0,30,901	0/0:16,1:16:39.09:0,39,647	0/0:28,0:27:23.79:0,24,380	0/0:34,0:32:53.06:0,53,951	0/0:26,0:27:27.41:0,27,804	0/0:19,0:18:20.80:0,21,426	0/1:22,0:16:74.90:105,0,75	0/0:17,0:16:8.95:0,9,31	0/1:69,0:62:72.45:72,0,87	0/0:31,0:31:17.20:0,17,880	0/0:20,0:19:53.96:0,54,721	0/0:37,0:36:92.95:0,93,1157	0/1:16,0:16:0.20:0,0,0	1/1:23,0:22:44.39:303,44,0	0/1:27,0:26:38.58:67,0,39	1/1:6,0:6:12.33:82,12,0
chr10	84215645	.	G	GTCTA	930.34	PASS	AB=0.814;AC=3;AF=0.054;AN=56;BaseQRankSum=6.831;DP=739;FS=7.463;HRun=0;HaplotypeScore=169.8373;InbreedingCoeff=0.4043;MQ=47.99;MQ0=36;MQRankSum=-6.564;QD=18.99;ReadPosRankSum=-1.668;VQSLOD=2.4304;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:23.57:0,24,443	0/0:8,0:7:18.06:0,18,359	0/0:19,0:4:9.03:0,9,131	0/0:36,0:9:15.01:0,15,230	0/0:25,0:23:60.19:0,60,1152	0/0:21,0:20:39.13:0,39,755	0/0:25,0:24:17.56:0,18,265	0/0:31,0:22:55.49:0,55,816	0/0:27,0:27:51.31:0,51,931	0/0:39,0:38:99:0,114,1998	0/0:18,0:18:45.14:0,45,798	0/0:26,0:25:50.89:0,51,957	0/0:30,0:29:80.86:0,81,1469	0/0:21,0:20:48.13:0,48,877	0/0:29,0:27:23.73:0,24,467	0/0:34,0:32:69.24:0,69,1349	0/0:31,0:31:87.09:0,87,1584	0/0:20,0:19:36.12:0,36,666	0/0:21,0:14:35.89:0,36,490	0/0:17,0:16:15.50:0,16,278	0/0:67,0:60:48.62:0,49,905	0/0:29,0:28:66.21:0,66,1246	0/0:18,0:17:45.13:0,45,858	0/0:39,0:38:99:0,99,1918	0/1:19,0:19:0.71:1,0,1	0/1:17,7:23:0.51:785,0,1	0/0:25,0:24:60.05:0,60,929	0/1:3,3:6:13.89:234,0,14
chr10	84215655	.	CTGTG	C	1532.85	PASS	AB=0.876;AC=21;AF=0.389;AN=54;BaseQRankSum=4.147;DP=700;FS=0.000;HRun=0;HaplotypeScore=150.4798;InbreedingCoeff=0.3722;MQ=47.30;MQ0=26;MQRankSum=-3.578;QD=3.98;ReadPosRankSum=-2.959;VQSLOD=1.9086;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,8:36:9.45:114,9,0	0/0:8,0:7:9.02:0,9,171	0/0:5,0:1:2.98:0,3,22	./.	0/1:24,1:25:1.29:1,0,742	0/0:18,0:17:24.07:0,24,532	0/1:22,2:24:6.47:129,0,6	1/1:26,2:18:19.26:249,19,0	0/0:26,0:26:32.99:0,33,721	0/0:32,0:36:76.41:0,76,1207	0/0:18,0:18:33.10:0,33,682	0/1:25,0:25:17.42:17,0,479	0/0:24,0:24:38.08:0,38,648	0/1:21,0:22:20.44:20,0,214	0/1:10,18:26:0.11:0,0,0	0/0:34,0:34:56.87:0,57,1085	0/0:32,0:32:64.08:0,64,1262	0/0:7,0:19:26.81:0,27,372	0/1:17,0:11:26.44:47,0,26	1/1:15,3:17:6:96,6,0	0/1:66,5:64:12.75:365,0,13	0/0:26,0:27:46.83:0,47,782	0/1:19,0:18:19.09:19,0,427	0/0:38,0:40:77.69:0,78,1559	0/1:6,0:18:0.18:0,0,1	1/1:16,0:19:15.01:183,15,0	1/1:13,11:25:23.51:384,24,0	1/1:4,0:5:5.76:82,6,0
chr10	84216064	.	GAAA	G	1086.51	PASS	AB=0.536;AC=7;AF=0.125;AN=56;BaseQRankSum=6.637;DP=516;FS=2.956;HRun=14;HaplotypeScore=75.6676;InbreedingCoeff=0.8081;MQ=57.26;MQ0=12;MQRankSum=-1.799;QD=16.22;ReadPosRankSum=3.378;VQSLOD=2.6482;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:32:66.10:0,66,1033	0/0:5,0:5:12.04:0,12,215	0/0:12,0:7:10.53:0,11,159	0/0:10,0:6:15.03:0,15,216	0/0:19,0:22:46.30:0,46,675	0/0:29,0:29:78.11:0,78,1240	0/0:20,0:24:45.08:0,45,722	0/0:22,0:16:44.98:0,45,640	0/0:14,0:16:36.04:0,36,548	0/0:20,0:21:46.36:0,46,701	0/0:15,0:15:29.97:0,30,412	0/0:11,0:12:24.47:0,24,339	0/0:15,0:16:30.03:0,30,449	0/0:13,0:14:27.02:0,27,412	1/1:7,13:22:53.96:577,54,0	0/0:12,0:13:24.06:0,24,390	0/0:24,0:26:72.13:0,72,1132	0/0:12,0:12:33.09:0,33,546	0/0:22,0:22:39.11:0,39,659	0/0:29,1:29:22.12:0,22,907	0/0:23,0:25:66.17:0,66,1128	0/0:14,0:14:27.08:0,27,476	0/0:13,0:13:26.90:0,27,390	0/0:20,0:22:51.09:0,51,789	0/1:2,2:15:26.81:50,0,27	1/1:6,12:18:24.14:345,24,0	0/0:14,0:14:24.08:0,24,435	1/1:3,7:9:24:263,24,0
chr10	84216166	.	T	TA	1492.91	PASS	AB=0.941;AC=7;AF=0.125;AN=56;BaseQRankSum=9.358;DP=499;FS=0.575;HRun=6;HaplotypeScore=54.1239;InbreedingCoeff=0.8405;MQ=68.67;MQ0=2;MQRankSum=-0.393;QD=20.73;ReadPosRankSum=1.983;VQSLOD=2.9362;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.08:0,45,450	0/0:4,0:4:12.03:0,12,122	0/0:18,0:14:35.15:0,35,304	0/1:15,1:9:9.81:10,0,129	0/0:28,0:28:69.03:0,69,663	0/0:17,0:17:48.08:0,48,475	0/0:24,0:24:72.06:0,72,695	0/0:24,0:24:54.15:0,54,553	0/0:9,0:9:24.05:0,24,245	0/0:20,0:20:54.10:0,54,538	0/0:20,0:20:38.87:0,39,370	0/0:12,0:12:33.07:0,33,336	0/0:13,0:13:36.03:0,36,350	0/0:14,0:14:42.04:0,42,407	1/1:3,16:19:42.13:528,42,0	0/0:10,0:10:27.03:0,27,259	0/0:26,0:26:63.07:0,63,618	0/0:13,0:13:36.04:0,36,351	0/0:24,0:24:66.11:0,66,652	0/0:23,0:23:66.10:0,66,648	0/0:16,0:16:45.08:0,45,451	0/0:20,0:20:48.08:0,48,479	0/0:17,0:17:45.09:0,45,453	0/0:14,0:14:33.06:0,33,329	0/0:26,0:26:78.14:0,78,774	1/1:2,20:22:60.15:725,60,0	0/0:18,0:18:42.07:0,42,416	1/1:0,15:15:30.10:377,30,0
chr10	84216898	.	A	AAC	870.80	PASS	AB=0.939;AC=18;AF=0.346;AN=52;BaseQRankSum=1.672;DP=484;FS=0.873;HRun=0;HaplotypeScore=92.8885;InbreedingCoeff=0.4013;MQ=68.19;MQ0=3;MQRankSum=2.035;QD=3.17;ReadPosRankSum=-2.469;VQSLOD=1.6120;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:39:8.57:86,9,0	0/0:3,0:3:5.05:0,5,39	1/1:26,0:21:0.47:1,0,0	./.	0/0:7,0:7:12.03:0,12,132	1/1:12,1:16:11.85:147,12,0	1/1:34,0:34:11.98:119,12,0	0/1:24,3:26:27.37:86,0,27	0/0:20,0:23:32.75:0,33,324	0/0:7,0:7:8.43:0,8,80	0/0:9,0:9:3.01:0,3,33	0/0:13,0:13:12.03:0,12,129	0/0:12,0:12:18.01:0,18,184	0/0:7,1:8:3:0,3,28	1/1:19,0:19:4.11:34,4,0	0/0:11,0:12:11.86:0,12,108	0/0:26,0:29:35.87:0,36,352	0/0:19,0:18:26.46:0,26,264	0/1:19,1:19:20.93:101,0,21	./.	1/1:41,0:43:41.58:371,42,0	0/0:3,0:3:3:0,3,25	0/0:3,0:3:9.02:0,9,97	0/0:24,0:23:41.15:0,41,416	0/0:5,0:13:5.68:0,6,28	0/1:19,0:23:34.58:35,0,51	0/1:17,2:19:36.22:36,0,56	1/1:6,0:6:2.96:19,3,0
chr10	84217161	.	T	TG	117.22	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.242;DP=359;FS=1.510;HRun=7;HaplotypeScore=36.8916;InbreedingCoeff=0.8226;MQ=80.74;MQ0=0;MQRankSum=0.297;QD=19.54;ReadPosRankSum=-0.727;VQSLOD=2.5818;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:51.05:0,51,485	0/0:6,0:6:12.01:0,12,116	0/0:14,0:14:21.03:0,21,203	0/0:11,0:11:16.42:0,16,149	0/0:11,0:11:30.05:0,30,289	0/0:17,0:17:42.06:0,42,405	0/0:23,0:23:54.08:0,54,521	0/0:24,0:24:63.08:0,63,604	0/0:12,0:12:33.02:0,33,306	0/0:6,0:6:12.01:0,12,116	0/0:12,0:12:24.02:0,24,222	0/0:11,0:11:30.05:0,30,290	0/0:9,0:9:21.01:0,21,196	0/0:9,0:9:27.04:0,27,261	0/0:9,0:9:24.04:0,24,232	0/0:9,0:9:21.03:0,21,203	0/0:15,0:15:39.06:0,39,377	0/0:16,0:16:42.06:0,42,405	0/0:6,0:6:9.01:0,9,86	0/0:9,0:9:24.04:0,24,231	0/0:44,0:44:99:0,117,1122	0/0:5,0:5:15.02:0,15,145	0/0:8,0:8:15.02:0,15,145	0/0:19,0:19:45.06:0,45,428	1/1:1,5:6:18.05:208,18,0	0/0:15,0:15:25.03:0,25,302	0/0:6,0:6:18.03:0,18,174	0/0:7,0:7:18.03:0,18,174
chr10	84218424	.	A	AAC	974.87	PASS	AB=0.715;AC=6;AF=0.107;AN=56;BaseQRankSum=-1.091;DP=432;FS=2.169;HRun=0;HaplotypeScore=55.4155;InbreedingCoeff=0.3196;MQ=64.61;MQ0=22;MQRankSum=1.163;QD=8.70;ReadPosRankSum=4.582;VQSLOD=2.7863;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,1:43:8.64:314,0,9	0/0:5,0:5:11.98:0,12,109	0/0:18,0:8:23.56:0,24,180	0/0:10,0:7:11.13:0,11,145	0/0:17,0:16:35.59:0,36,347	0/0:18,0:18:23.07:0,23,315	0/0:4,0:4:11.97:0,12,101	0/0:32,0:29:71.86:0,72,687	0/0:5,0:5:13.23:0,13,127	0/0:18,0:17:44.20:0,44,421	0/0:16,0:15:39.90:0,40,406	0/0:12,0:11:29.12:0,29,240	0/0:10,0:10:21.03:0,21,230	0/0:9,0:9:20.98:0,21,190	0/1:3,3:4:0.06:0,0,0	0/0:9,0:6:17.72:0,18,150	0/0:40,0:40:91.87:0,92,1024	0/0:21,0:20:44.59:0,45,411	0/0:20,0:19:52.08:0,52,486	0/0:13,0:13:33:0,33,312	0/0:11,0:10:23.80:0,24,191	0/0:4,0:4:9.02:0,9,104	0/0:4,0:4:11.95:0,12,109	0/0:6,0:5:6:0,6,50	0/1:23,0:18:21.36:21,0,44	1/1:5,17:22:8.55:522,9,0	0/0:17,0:15:39:0,39,400	0/1:5,8:13:31.50:234,0,31
chr10	84218934	.	C	CA	746.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.007;DP=740;FS=1.556;HRun=7;HaplotypeScore=79.9072;InbreedingCoeff=0.9996;MQ=88.28;MQ0=0;MQRankSum=-0.255;QD=26.64;ReadPosRankSum=1.831;VQSLOD=4.3788;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,138,1327	0/0:12,0:12:36.06:0,36,348	0/0:27,0:28:52.27:0,52,486	0/0:32,0:31:59.31:0,59,643	0/0:21,0:21:60.09:0,60,579	0/0:16,0:16:42.07:0,42,406	0/0:34,0:34:94.96:0,95,912	0/0:32,0:32:75.09:0,75,718	0/0:27,0:27:75.10:0,75,718	0/0:29,0:29:84.13:0,84,810	0/0:22,0:22:63.10:0,63,608	0/0:15,0:15:42.07:0,42,405	0/0:28,0:28:78.11:0,78,748	0/0:25,0:25:69.06:0,69,647	1/1:2,26:28:46.25:841,46,0	0/0:17,0:17:45.02:0,45,421	0/0:32,0:32:72.07:0,72,684	0/0:35,0:35:93.11:0,93,889	0/0:23,0:23:60.08:0,60,575	0/0:21,0:21:54.07:0,54,516	0/0:29,0:29:84.11:0,84,805	0/0:27,0:27:75.10:0,75,718	0/0:20,0:20:54.09:0,54,521	0/0:34,0:34:96.15:0,96,927	0/0:22,0:22:62.95:0,63,587	0/0:32,0:32:96.15:0,96,923	0/0:31,0:31:81.10:0,81,775	0/0:14,0:14:36.05:0,36,347
chr10	84219366	.	T	TTTTG	5293.64	PASS	AB=0.569;AC=7;AF=0.125;AN=56;BaseQRankSum=-11.117;DP=668;FS=2.010;HRun=0;HaplotypeScore=101.5872;InbreedingCoeff=0.8317;MQ=71.44;MQ0=1;MQRankSum=1.764;QD=40.10;ReadPosRankSum=1.119;VQSLOD=5.2876;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,39:49:87.29:2165,87,0	0/0:10,0:10:27.08:0,27,432	0/0:25,0:20:27.82:0,28,362	0/0:27,0:23:28.09:0,28,466	0/0:24,0:24:66.19:0,66,1062	0/0:21,0:21:57.18:0,57,913	0/0:16,0:16:13.83:0,14,596	0/0:22,0:22:36.05:0,36,440	0/0:18,0:18:45.09:0,45,653	0/0:25,0:25:68.90:0,69,986	0/0:20,0:20:45.13:0,45,709	0/0:23,0:23:63.15:0,63,938	0/0:15,0:15:39.10:0,39,609	0/0:23,0:23:63.17:0,63,985	1/1:2,25:29:45.15:1120,45,0	0/0:22,0:22:54.15:0,54,849	0/0:24,0:23:63.19:0,63,1007	0/0:19,0:19:45.13:0,45,709	0/0:22,0:22:48.12:0,48,690	0/0:23,0:23:62.92:0,63,968	0/0:28,0:28:66.22:0,66,1088	0/0:21,0:21:54.15:0,54,862	0/0:26,0:26:63.18:0,63,985	0/0:28,0:28:66.16:0,66,1010	0/0:23,0:23:66.17:0,66,1016	0/1:8,21:33:20.91:1113,0,21	0/0:31,0:31:84.17:0,84,1259	1/1:1,20:21:36.12:896,36,0
chr10	84220028	.	TA	T	496.83	PASS	AB=0.950;AC=5;AF=0.089;AN=56;BaseQRankSum=8.329;DP=499;FS=2.786;HRun=11;HaplotypeScore=59.6457;InbreedingCoeff=0.7603;MQ=70.49;MQ0=2;MQRankSum=-0.392;QD=7.31;ReadPosRankSum=1.131;VQSLOD=1.9227;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.14:0,60,633	0/0:7,0:7:21.05:0,21,224	0/0:19,0:9:11.91:0,12,95	0/1:18,1:16:22.01:22,0,84	0/0:23,1:25:29.35:0,29,493	0/0:11,0:11:27.07:0,27,288	0/0:13,0:13:33.07:0,33,345	0/0:30,0:30:81.17:0,81,848	0/0:14,0:14:30.08:0,30,320	0/0:24,0:24:51.10:0,51,520	0/0:26,0:26:62.90:0,63,651	0/0:13,0:13:27.05:0,27,279	0/0:12,0:12:36.09:0,36,384	0/0:9,0:9:24.06:0,24,256	1/1:3,0:24:38.56:112,39,0	0/0:10,0:10:30.08:0,30,320	0/0:28,0:28:75.19:0,75,799	0/0:15,0:15:38.97:0,39,388	0/0:26,0:26:75.16:0,75,777	0/0:12,0:12:26.18:0,26,286	0/0:11,0:11:30.08:0,30,320	0/0:9,0:9:21.05:0,21,224	0/0:17,1:18:17.46:0,17,384	0/0:9,0:9:27.07:0,27,288	1/1:2,22:24:59.87:492,60,0	0/0:16,0:16:45.03:0,45,450	0/0:36,0:36:96.14:0,96,1008	0/0:15,1:16:20.46:0,20,416
chr10	84220462	.	TG	T	82.62	PASS	AB=0.813;AC=2;AF=0.036;AN=56;BaseQRankSum=4.010;DP=379;FS=5.581;HRun=5;HaplotypeScore=45.4143;InbreedingCoeff=-0.0354;MQ=67.20;MQ0=23;MQRankSum=-2.801;QD=6.89;ReadPosRankSum=-0.878;VQSLOD=-0.6552;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:72.24:0,72,983	0/0:4,0:2:3.01:0,3,41	0/0:21,0:8:14.31:0,14,168	0/0:14,0:8:18.89:0,19,197	0/0:6,0:5:12.04:0,12,163	0/0:10,0:10:18.06:0,18,245	0/0:17,0:15:42.14:0,42,569	0/0:27,0:23:60.16:0,60,772	0/0:13,0:13:35.89:0,36,474	0/0:11,0:11:33.11:0,33,444	0/0:8,0:8:9:0,9,92	0/0:13,0:13:29.85:0,30,395	0/0:7,0:7:18.06:0,18,245	0/0:14,0:13:33.11:0,33,444	0/0:12,0:12:30.09:0,30,394	0/0:5,0:5:13.86:0,14,169	0/0:24,0:24:60.10:0,60,775	0/0:25,0:25:66.20:0,66,880	0/0:26,0:17:42.03:0,42,548	0/0:11,0:11:30.10:0,30,408	0/0:13,0:12:27.08:0,27,354	0/0:6,0:6:9.03:0,9,123	0/0:14,0:13:24.08:0,24,317	0/0:15,0:15:35.84:0,36,489	0/0:10,0:9:24.08:0,24,328	0/1:4,6:8:22.99:146,0,23	0/0:14,0:12:30.08:0,30,378	0/1:2,0:2:17.66:24,0,18
chr10	84220590	.	TGC	T	855.01	PASS	AB=0.961;AC=11;AF=0.196;AN=56;BaseQRankSum=4.382;DP=547;FS=9.067;HRun=0;HaplotypeScore=90.7034;InbreedingCoeff=0.1887;MQ=48.38;MQ0=23;MQRankSum=-1.579;QD=5.09;ReadPosRankSum=0.696;VQSLOD=2.0189;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:30:14.88:0,15,266	0/0:12,0:11:24.57:0,25,266	0/0:23,0:8:2.07:0,2,58	0/1:26,0:9:14.30:14,0,35	0/1:15,0:15:10.20:10,0,270	0/0:8,0:8:17.76:0,18,181	0/0:20,0:19:23.01:0,23,310	0/0:28,0:28:74.88:0,75,519	0/0:16,0:16:12.39:0,12,313	0/0:24,0:19:26.78:0,27,429	0/1:14,0:12:10.26:10,0,131	0/0:20,0:18:17.14:0,17,264	0/1:6,1:6:27.96:28,0,43	0/1:13,2:15:9.58:10,0,279	0/0:15,0:14:23.92:0,24,187	0/1:10,0:10:17.26:17,0,211	0/0:23,0:22:52.52:0,53,478	0/0:14,0:13:31.92:0,32,270	0/0:34,0:33:49.94:0,50,457	0/0:11,0:11:17.56:0,18,176	0/0:55,0:47:65.28:0,65,452	0/0:13,0:11:17.18:0,17,216	0/0:13,0:12:26.74:0,27,335	0/1:34,1:34:4.31:4,0,601	0/0:6,0:6:2.98:0,3,21	1/1:36,0:36:86.70:748,87,0	0/0:12,0:12:15.16:0,15,114	1/1:10,0:10:20.93:166,21,0
chr10	84220592	.	CGT	C	216.57	PASS	AB=0.964;AC=19;AF=0.396;AN=48;BaseQRankSum=2.508;DP=566;FS=5.118;HRun=0;HaplotypeScore=96.4747;InbreedingCoeff=-0.3599;MQ=47.63;MQ0=26;MQRankSum=0.555;QD=0.57;ReadPosRankSum=1.666;VQSLOD=1.0040;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:32:5.66:34,0,6	0/0:10,0:11:12.03:0,12,150	./.	./.	0/0:15,0:15:3.61:0,4,126	0/0:10,0:10:8.11:0,8,66	0/1:19,1:18:36.27:36,0,57	0/0:28,0:28:11.74:0,12,74	0/0:15,0:15:11.27:0,11,165	0/0:26,0:21:16.79:0,17,174	0/1:13,1:12:21.48:21,0,64	0/1:19,1:18:14.63:15,0,128	1/1:8,0:6:3:31,3,0	0/1:15,0:15:11.86:12,0,92	1/1:15,0:14:1.25:3,1,0	0/1:10,0:11:16.91:17,0,76	0/1:25,0:24:4.24:4,0,164	0/1:16,0:15:5.16:5,0,99	0/1:34,1:35:20.58:34,0,21	0/1:10,0:12:12.04:30,0,12	0/1:58,0:48:22.37:22,0,30	0/1:12,0:10:21.82:22,0,55	0/0:14,0:13:14.82:0,15,172	0/1:35,1:35:27.04:27,0,417	./.	0/1:36,0:36:27.21:27,0,28	0/1:11,0:12:14.47:14,0,17	./.
chr10	84220625	.	G	GTA	110.85	PASS	AB=0.948;AC=6;AF=0.115;AN=52;BaseQRankSum=2.911;DP=552;FS=0.869;HRun=0;HaplotypeScore=115.8704;InbreedingCoeff=-0.1397;MQ=44.73;MQ0=31;MQRankSum=-2.593;QD=0.72;ReadPosRankSum=-0.089;VQSLOD=2.0352;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:31:21.98:0,22,163	0/0:12,0:11:20.88:0,21,223	0/0:2,0:1:2.96:0,3,19	./.	0/0:18,0:18:32.98:0,33,333	0/0:14,0:14:23.95:0,24,220	0/1:25,0:24:56.20:56,0,169	0/0:27,0:21:53.69:0,54,424	0/0:17,0:17:27:0,27,289	0/0:27,0:21:53.33:0,53,507	0/0:15,0:12:18:0,18,184	0/0:18,0:15:26.92:0,27,279	0/0:8,0:6:11.88:0,12,89	0/0:11,0:11:23.84:0,24,228	0/1:11,6:14:37.33:37,0,83	0/0:10,0:10:20.60:0,21,186	0/0:22,0:22:48.14:0,48,434	0/0:18,0:17:41.78:0,42,370	0/1:24,1:23:51.98:52,0,177	0/1:11,0:9:17.81:18,0,64	0/1:61,1:54:48.65:49,0,298	0/0:14,0:10:20.97:0,21,206	0/0:21,0:20:42:0,42,430	0/0:39,0:37:73.68:0,74,830	./.	0/0:50,0:49:16.34:0,16,380	0/1:12,0:11:20.43:20,0,29	0/0:10,0:9:13.96:0,14,83
chr10	84220681	.	A	ATGTGTGTG	1645.08	PASS	AB=0.967;AC=15;AF=0.268;AN=56;BaseQRankSum=1.170;DP=659;FS=6.006;HRun=0;HaplotypeScore=152.6003;InbreedingCoeff=0.7897;MQ=48.25;MQ0=29;MQRankSum=-4.480;QD=6.48;ReadPosRankSum=-5.652;VQSLOD=-0.2070;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:35:22.55:165,23,0	0/0:9,0:7:8.90:0,9,221	0/1:28,0:9:36.05:36,0,131	0/0:26,0:12:18.54:0,19,270	0/0:21,0:20:39.10:0,39,765	0/0:12,0:12:23.77:0,24,530	1/1:25,0:25:24.93:369,25,0	1/1:34,0:33:55.61:750,56,0	0/0:23,0:24:45.10:0,45,876	0/0:18,0:15:27.08:0,27,617	0/0:15,0:15:24.08:0,24,530	0/0:22,0:21:36.06:0,36,608	0/0:16,0:15:27.09:0,27,569	0/0:20,0:20:50.83:0,51,842	0/0:23,0:22:51.16:0,51,1106	0/0:11,0:11:15.02:0,15,256	0/0:28,0:32:53.04:0,53,1033	0/0:19,0:18:16.45:0,16,770	1/1:17,0:13:30:423,30,0	1/1:5,10:15:1.82:5,2,0	1/1:35,40:78:8.71:64,9,0	0/0:11,0:11:24.05:0,24,423	0/0:10,0:10:14.95:0,15,301	0/0:41,0:40:54.99:0,55,1465	0/0:15,0:14:11.54:0,12,172	0/0:28,0:53:13.24:0,13,565	1/1:2,8:11:2.27:13,2,0	0/0:2,0:5:11.33:0,11,58
chr10	84221256	.	AT	A	879.52	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=10.301;DP=452;FS=1.595;HRun=11;HaplotypeScore=50.4405;InbreedingCoeff=0.7772;MQ=70.14;MQ0=4;MQRankSum=-1.052;QD=8.80;ReadPosRankSum=3.929;VQSLOD=2.0091;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,23:28:17.90:509,18,0	0/0:3,0:3:9.02:0,9,96	0/1:10,0:8:4.14:4,0,72	0/1:9,0:6:2.47:2,0,53	0/0:16,1:17:23.47:0,23,449	0/0:26,1:27:41.51:0,42,641	0/0:14,0:14:33.06:0,33,343	0/0:37,0:37:81.20:0,81,857	0/0:8,0:8:21.05:0,21,224	0/0:22,1:23:35.51:0,36,574	0/0:14,0:14:39.08:0,39,408	0/0:7,0:7:21.05:0,21,224	0/0:10,0:10:24.05:0,24,248	0/0:12,0:12:33.08:0,33,351	1/1:3,16:19:44.94:369,45,0	0/0:20,0:19:51.13:0,51,544	0/0:28,0:28:75.19:0,75,800	0/0:13,0:13:29.87:0,30,291	0/0:18,1:18:17.35:0,17,370	0/0:23,0:22:51.08:0,51,525	0/0:13,0:13:26.98:0,27,251	0/0:2,0:2:6.02:0,6,64	0/0:6,0:6:15.02:0,15,152	0/0:13,0:13:39.10:0,39,416	0/0:25,0:25:69.17:0,69,736	1/1:4,0:24:34.83:107,35,0	0/0:18,0:17:48.12:0,48,512	1/1:0,0:8:16.30:47,16,0
chr10	84222018	.	CG	C	1307.15	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.479;DP=658;FS=12.009;HRun=2;HaplotypeScore=64.2724;InbreedingCoeff=0.9934;MQ=77.49;MQ0=0;MQRankSum=-4.485;QD=35.33;ReadPosRankSum=0.338;VQSLOD=3.1590;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:99:1402,108,0	0/0:10,0:10:30.10:0,30,447	0/0:26,0:26:60.62:0,61,1024	0/0:30,0:29:78.67:0,79,1094	0/0:16,0:16:48.16:0,48,716	0/0:16,0:16:48.15:0,48,698	0/0:35,0:35:99:0,105,1529	0/0:14,0:14:42.14:0,42,628	0/0:25,0:25:75.24:0,75,1104	0/0:26,0:26:78.25:0,78,1135	0/0:19,0:19:57.18:0,57,834	0/0:26,0:26:78.24:0,78,1127	0/0:19,0:19:54.18:0,54,805	0/0:24,0:24:72.23:0,72,1049	0/0:26,0:26:75.25:0,75,1123	0/0:27,0:27:78.25:0,78,1137	0/0:40,0:40:99:0,114,1683	0/0:30,0:30:90.27:0,90,1292	0/0:32,0:32:90.24:0,90,1284	0/0:21,0:21:60.20:0,60,896	0/0:31,0:31:93.26:0,93,1313	0/0:16,0:16:42.14:0,42,628	0/0:18,0:18:54.17:0,54,786	0/0:25,0:25:75.23:0,75,1083	0/0:8,0:8:24.08:0,24,358	0/0:31,0:31:84.27:0,84,1217	0/0:22,0:22:66.21:0,66,966	0/0:7,0:7:21.07:0,21,314
chr10	84222910	.	C	CAA	760.52	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=2.134;DP=350;FS=0.647;HRun=12;HaplotypeScore=56.6334;InbreedingCoeff=0.5966;MQ=74.80;MQ0=5;MQRankSum=-1.372;QD=15.84;ReadPosRankSum=-3.510;VQSLOD=1.4071;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:59.98:0,60,548	0/0:3,0:3:9.01:0,9,83	0/0:19,0:11:7.86:0,8,53	0/0:23,0:11:1.86:0,2,13	0/0:13,0:14:20.84:0,21,239	0/0:16,0:16:21.01:0,21,315	0/0:12,0:12:29.97:0,30,269	0/0:17,0:19:11.65:0,12,152	0/0:8,0:8:14.97:0,15,139	0/0:10,0:10:20.87:0,21,184	0/0:6,0:6:8.95:0,9,83	0/0:5,0:5:11.99:0,12,111	0/0:7,0:10:23.17:0,23,173	0/0:9,0:9:18.01:0,18,166	1/1:7,2:9:15:174,15,0	0/0:3,0:3:3:0,3,28	0/0:28,0:31:45:0,45,664	0/0:20,0:21:44.84:0,45,453	0/0:14,0:16:15.21:0,15,178	0/0:9,0:9:23.96:0,24,210	0/0:16,0:18:11.64:0,12,205	0/0:1,0:1:3:0,3,28	0/0:1,0:1:3:0,3,28	0/0:6,0:7:5.83:0,6,102	0/0:16,0:18:38.46:0,38,329	1/1:8,7:20:19.92:417,20,0	0/1:6,0:6:4.97:5,0,96	1/1:2,10:13:23.57:303,24,0
chr10	84224010	.	T	TAA	1353.16	PASS	AB=0.800;AC=11;AF=0.196;AN=56;BaseQRankSum=0.313;DP=441;FS=2.834;HRun=9;HaplotypeScore=58.7875;InbreedingCoeff=0.1431;MQ=55.56;MQ0=36;MQRankSum=-4.782;QD=9.67;ReadPosRankSum=-0.890;VQSLOD=0.1061;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:28:63.07:0,63,649	0/0:5,0:5:9.02:0,9,96	0/0:20,0:9:20.66:0,21,171	0/0:10,0:4:5.80:0,6,59	0/0:23,0:21:39.06:0,39,414	0/0:16,0:14:27:0,27,274	1/1:12,7:12:6.02:80,6,0	0/1:9,8:10:4.88:301,0,5	0/0:11,0:10:15.03:0,15,160	0/0:23,0:22:51.08:0,51,541	0/0:9,0:9:12.02:0,12,126	0/0:13,0:12:24.02:0,24,245	0/0:5,0:4:9.01:0,9,88	0/0:6,0:2:6.02:0,6,64	1/1:13,0:9:2.04:8,2,0	0/0:18,0:15:33.04:0,33,351	0/0:34,0:34:72.13:0,72,755	0/0:21,0:20:45.08:0,45,478	0/1:13,3:14:25.62:352,0,26	0/1:12,4:16:41.16:124,0,41	0/1:6,6:10:17.77:100,0,18	0/0:14,0:13:30.06:0,30,319	0/0:11,0:10:15:0,15,159	0/0:18,0:18:39.07:0,39,413	0/0:11,0:6:12.01:0,12,127	0/1:23,0:19:31.66:203,0,32	0/1:9,8:16:5.41:298,0,5	0/1:4,0:4:21.04:30,0,21
chr10	84224112	.	C	CA	671.55	PASS	AB=0.785;AC=13;AF=0.232;AN=56;BaseQRankSum=-1.864;DP=380;FS=3.264;HRun=12;HaplotypeScore=46.6517;InbreedingCoeff=0.2029;MQ=56.91;MQ0=21;MQRankSum=-0.565;QD=5.64;ReadPosRankSum=-1.016;VQSLOD=1.0450;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:26:51.69:0,52,349	1/1:1,2:3:3:29,3,0	0/0:4,0:5:7.96:0,8,46	0/1:9,0:5:7.95:8,0,33	0/0:15,0:16:30.61:0,31,209	0/0:13,0:14:31.83:0,32,224	0/0:12,0:7:8.91:0,9,66	0/0:26,0:21:35.72:0,36,261	0/0:9,0:10:10.88:0,11,70	0/1:4,5:9:6.89:102,0,7	0/1:5,5:9:6.89:102,0,7	0/0:11,0:14:19.54:0,20,125	0/0:4,0:4:5.96:0,6,44	0/0:11,0:11:17.88:0,18,131	0/1:6,5:11:38.69:148,0,39	0/1:4,5:9:28.85:63,0,29	1/1:16,9:22:14.62:300,15,0	0/0:24,1:22:21.53:0,22,321	0/1:15,3:16:54.88:55,0,141	0/0:16,0:15:28.81:0,29,202	0/1:9,0:10:6.36:6,0,107	0/0:6,0:6:8.93:0,9,66	0/0:11,0:10:20.87:0,21,153	0/0:18,2:20:38.11:0,38,271	0/0:2,0:15:27.43:0,27,93	1/1:15,0:14:2.83:8,3,0	0/0:12,0:13:27.93:0,28,187	0/0:13,0:7:2.89:0,3,22
chr10	84224260	.	GA	G	262.48	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.218;DP=435;FS=8.742;HRun=9;HaplotypeScore=44.6905;InbreedingCoeff=0.6883;MQ=75.37;MQ0=0;MQRankSum=0.667;QD=16.41;ReadPosRankSum=0.627;VQSLOD=2.9092;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,2:27:47.95:0,48,794	0/0:5,0:5:12.04:0,12,138	0/0:17,0:13:16.42:0,16,131	0/0:19,0:16:20.93:0,21,221	0/0:23,0:23:57.16:0,57,647	0/0:18,0:18:51.14:0,51,579	0/0:14,0:14:36.09:0,36,406	0/0:27,0:27:75.18:0,75,830	0/0:14,0:14:33.10:0,33,380	0/0:14,0:14:36.09:0,36,405	0/0:13,1:14:5.63:0,6,318	0/0:10,0:10:21.06:0,21,241	0/0:5,0:5:12.04:0,12,138	0/0:12,0:11:27.08:0,27,308	0/0:16,0:16:45.10:0,45,492	0/0:16,0:16:42.12:0,42,482	0/0:16,0:16:39.12:0,39,450	0/0:18,0:17:42.12:0,42,484	0/0:23,0:23:54.15:0,54,616	0/0:18,0:18:42.12:0,42,485	0/0:9,1:10:2.61:0,3,273	0/0:13,0:13:33.10:0,33,381	0/0:16,0:16:36.11:0,36,415	0/0:20,0:20:42.08:0,42,470	1/1:1,15:14:39.01:357,39,0	0/0:17,0:17:48.13:0,48,545	0/0:13,0:13:33.09:0,33,371	0/0:3,0:3:9.03:0,9,104
chr10	84227937	.	T	TGCTCG	8232.06	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=3.107;DP=718;FS=2.981;HRun=0;HaplotypeScore=138.9789;InbreedingCoeff=0.9971;MQ=79.17;MQ0=0;MQRankSum=-12.516;QD=62.36;ReadPosRankSum=0.902;VQSLOD=5.3174;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,35:42:72.25:2187,72,0	0/0:10,0:10:27.09:0,27,575	0/0:22,0:22:57.17:0,57,1085	0/0:21,0:21:50.23:0,50,1098	0/0:23,0:23:60.21:0,60,1264	0/0:27,0:27:81.28:0,81,1694	0/0:41,0:41:99:0,108,2246	0/0:24,0:24:63.19:0,63,1212	0/0:20,0:20:60.21:0,60,1247	0/0:23,0:23:60.21:0,60,1272	0/0:14,0:14:39.13:0,39,830	0/0:34,0:34:99:0,102,2133	0/0:29,0:29:87.28:0,87,1796	0/0:30,0:30:87.28:0,87,1799	1/1:3,18:22:57.15:1578,57,0	0/0:34,0:34:96.33:0,96,2017	0/0:30,0:30:84.27:0,84,1731	0/0:28,0:28:75.21:0,75,1490	0/0:26,0:26:75.26:0,75,1597	0/0:14,0:14:33.11:0,33,702	0/0:49,0:49:99:0,138,2884	0/0:23,0:23:66.23:0,66,1392	0/0:10,0:10:27.09:0,27,558	0/0:33,0:33:93.32:0,93,1949	1/1:3,15:21:24.55:751,25,0	1/1:7,32:39:99:3164,108,0	0/0:21,0:21:60.21:0,60,1264	1/1:2,4:8:18.06:553,18,0
chr10	84229652	.	TAC	T	413.44	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=9.115;DP=967;FS=3.662;HRun=0;HaplotypeScore=168.2981;InbreedingCoeff=0.3636;MQ=57.75;MQ0=6;MQRankSum=-5.930;QD=3.47;ReadPosRankSum=1.349;VQSLOD=2.9171;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,139,2236	0/0:7,0:7:18.06:0,18,306	0/0:37,0:20:49.01:0,49,694	0/0:52,0:33:74.23:0,74,1127	0/0:24,0:24:57.18:0,57,942	0/0:28,0:27:68.93:0,69,1051	0/0:41,0:41:99:0,102,1566	0/0:45,0:44:99:0,99,1524	0/0:28,0:28:69.18:0,69,1119	0/0:40,0:40:98.88:0,99,1587	0/0:15,0:15:36.11:0,36,562	0/0:44,0:44:99:0,120,1843	0/0:41,0:41:99:0,111,1773	0/0:41,0:41:99:0,102,1583	0/1:45,0:45:35.41:35,0,145	0/0:44,0:44:99:0,120,1899	0/0:21,0:21:55:0,55,812	0/0:22,0:22:63.19:0,63,1021	0/0:24,0:24:60.14:0,60,868	0/0:24,0:24:57.10:0,57,827	0/0:95,0:95:99:0,253,3969	0/0:23,0:23:54.15:0,54,856	0/0:14,0:14:27.08:0,27,432	0/0:50,0:50:99:0,129,2053	1/1:13,15:26:42.02:478,42,0	0/1:33,0:32:6.94:7,0,507	0/0:32,0:32:81.23:0,81,1301	0/1:13,0:13:11.63:12,0,84
chr10	84229660	.	CACATGCACACAAACATATGT	C	5410.16	PASS	AB=0.574;AC=5;AF=0.089;AN=56;BaseQRankSum=10.240;DP=1000;FS=6.963;HRun=0;HaplotypeScore=493.5674;InbreedingCoeff=0.8770;MQ=56.43;MQ0=6;MQRankSum=-8.636;QD=59.45;ReadPosRankSum=3.209;VQSLOD=2.6336;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:58:99:0,119,9507	0/0:7,0:7:21.07:0,21,1935	0/0:43,0:22:44.56:0,45,1561	0/0:56,0:35:71.15:0,71,3064	0/0:26,0:26:63.14:0,63,4045	0/0:26,0:25:63.15:0,63,4413	0/0:41,0:41:90.75:0,91,5831	0/0:49,0:48:99:0,105,5591	0/0:29,0:29:69.57:0,70,4897	0/0:40,0:40:96.29:0,96,7294	0/0:14,0:14:39.12:0,39,2726	0/0:45,0:45:99:0,132,10022	0/0:43,0:43:99:0,105,8048	0/0:43,0:43:99:0,105,6347	1/1:4,41:45:45.15:2350,45,0	0/0:43,0:43:99:0,123,9273	0/0:22,0:22:54.16:0,54,3309	0/0:26,0:26:30.33:0,30,4949	0/0:25,0:25:54.17:0,54,3539	0/0:24,0:24:66.22:0,66,4674	0/0:98,0:98:99:0,262,18678	0/0:26,0:26:60.15:0,60,3932	0/0:16,0:16:42.14:0,42,2820	0/0:49,0:49:99:0,126,9489	0/0:29,0:27:66.22:0,66,2837	0/1:8,23:30:1.50:1982,0,1	0/0:31,0:31:75.25:0,75,4897	1/1:3,12:15:21.07:1078,21,0
chr10	84229685	.	GCA	G	1597.96	PASS	AB=0.967;AC=9;AF=0.161;AN=56;BaseQRankSum=13.328;DP=1020;FS=9.729;HRun=0;HaplotypeScore=174.5799;InbreedingCoeff=0.3358;MQ=58.48;MQ0=13;MQRankSum=-5.478;QD=6.69;ReadPosRankSum=2.112;VQSLOD=2.8971;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,1:55:99:0,123,1968	0/0:8,0:8:24.08:0,24,378	0/0:58,1:27:23.89:0,24,747	0/0:61,0:37:44.48:0,44,611	0/1:28,3:31:34.79:35,0,935	0/0:26,0:25:54.18:0,54,868	0/0:33,1:34:41.59:0,42,1171	0/0:34,0:34:59.87:0,60,968	0/0:30,0:30:37.63:0,38,1080	0/0:33,2:35:16.94:0,17,1250	0/0:15,0:15:33.11:0,33,513	0/0:50,1:51:92.77:0,93,2007	0/0:39,0:39:59.72:0,60,1461	1/1:8,45:53:99:1320,108,0	0/1:53,0:53:51.13:94,0,51	0/0:44,1:46:35.80:0,36,1519	0/0:21,1:22:20.50:0,21,803	0/0:33,0:33:90.21:0,90,1402	0/1:22,2:23:22.18:22,0,658	0/0:23,0:23:60.20:0,60,959	0/0:90,5:95:83.46:0,83,3375	0/0:21,0:21:45.14:0,45,701	0/0:20,0:20:48.15:0,48,753	0/0:52,1:53:86.75:0,87,1902	1/1:5,0:21:41.59:201,42,0	0/1:35,0:34:43.08:43,0,462	0/0:21,0:21:51.17:0,51,825	0/1:20,0:20:35.70:36,0,187
chr10	84230939	.	TGC	T	1159.28	PASS	AB=0.698;AC=15;AF=0.278;AN=54;BaseQRankSum=6.689;DP=711;FS=17.533;HRun=0;HaplotypeScore=132.2679;InbreedingCoeff=0.6266;MQ=55.21;MQ0=6;MQRankSum=0.078;QD=4.67;ReadPosRankSum=-2.878;VQSLOD=1.1924;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:2.25:0,2,11	0/0:11,0:10:13.97:0,14,95	0/0:18,0:9:7.05:0,7,35	./.	0/0:18,0:18:33.76:0,34,310	0/0:20,0:20:50.78:0,51,480	0/1:5,1:29:5.11:98,0,5	1/1:4,0:19:38.76:287,39,0	0/0:33,0:33:71.18:0,71,689	0/0:29,0:28:57.65:0,58,417	0/0:13,0:13:23.79:0,24,168	0/0:27,0:27:36.69:0,37,606	0/0:19,0:19:47.46:0,47,407	0/0:18,0:18:40.94:0,41,367	1/1:12,0:31:2.38:54,2,0	0/0:14,0:14:0.84:0,1,101	0/0:37,0:37:73.37:0,73,468	0/0:45,0:45:91.63:0,92,1127	1/1:6,16:21:47.65:366,48,0	1/1:3,2:12:11.90:132,12,0	0/1:13,61:71:3.21:177,0,3	0/1:27,0:26:9.11:9,0,381	0/0:16,0:15:23.84:0,24,230	0/0:39,0:39:75.86:0,76,1133	1/1:20,0:20:2.84:14,3,0	0/0:29,0:29:41.59:0,42,200	1/1:1,13:14:15.05:195,15,0	0/0:20,0:19:17.37:0,17,91
chr10	84230941	.	CGCGCGCGCGTGT	C	829.68	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=9.255;DP=698;FS=13.461;HRun=0;HaplotypeScore=224.2945;InbreedingCoeff=0.3185;MQ=54.75;MQ0=9;MQRankSum=-6.616;QD=5.93;ReadPosRankSum=-0.434;VQSLOD=1.5032;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,42:45:1.26:0,1,15	0/0:10,0:9:18.06:0,18,618	0/0:16,0:7:6.91:0,7,83	0/0:9,0:4:9.03:0,9,129	0/0:18,0:18:51.14:0,51,1485	0/0:19,0:19:54.18:0,54,2105	0/0:28,0:28:17.37:0,17,583	0/1:19,0:19:99:116,0,120	0/0:32,0:32:81.28:0,81,3110	0/0:30,0:29:77.59:0,78,2047	0/0:13,0:13:30.10:0,30,847	0/0:28,0:28:72.25:0,72,2964	0/0:20,0:20:60.11:0,60,1850	0/0:17,0:17:42.14:0,42,1728	1/1:28,0:29:3.38:88,3,0	0/0:14,0:14:33.11:0,33,903	0/0:37,0:37:94.97:0,95,2576	0/0:45,0:44:99:0,126,5367	0/1:21,0:20:35.11:35,0,283	0/0:12,0:12:11.82:0,12,307	0/0:73,0:70:26.77:0,27,596	0/0:26,0:25:63.18:0,63,2331	0/0:15,0:14:30.05:0,30,1134	0/0:38,0:38:99:0,102,4762	1/1:1,1:19:2.62:56,3,0	0/1:30,0:30:99:365,0,357	0/0:13,0:13:15.05:0,15,507	0/1:21,0:19:0.10:298,0,0
chr10	84230949	.	CGTGT	C	1215.88	PASS	AB=1.000;AC=20;AF=0.385;AN=52;BaseQRankSum=6.371;DP=693;FS=6.432;HRun=0;HaplotypeScore=151.3410;InbreedingCoeff=0.6657;MQ=54.27;MQ0=11;MQRankSum=-0.782;QD=5.66;ReadPosRankSum=2.332;VQSLOD=2.3517;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:8.63:0,9,108	1/1:5,3:8:3.01:47,3,0	./.	./.	0/1:15,0:15:23.04:23,0,262	0/1:20,0:20:17.59:18,0,408	0/0:33,0:33:18.17:0,18,275	0/0:19,0:19:9.03:0,9,137	0/0:24,0:37:33.11:0,33,626	1/1:23,4:26:12.03:159,12,0	1/1:11,1:12:2.99:24,3,0	0/0:27,0:29:41.46:0,41,733	0/0:21,0:21:15.05:0,15,284	0/0:19,0:19:15.92:0,16,260	1/1:23,0:23:2.88:72,3,0	1/1:7,8:15:14.95:235,15,0	1/1:23,15:38:28.88:449,29,0	0/0:39,0:40:69.56:0,70,1256	0/0:22,0:21:15.05:0,15,225	0/0:16,0:16:5.15:0,5,133	0/0:83,0:80:45.13:0,45,672	0/0:19,0:20:32.58:0,33,631	0/0:13,0:12:18.03:0,18,284	0/0:38,0:41:68.97:0,69,1461	1/1:19,0:19:2.88:15,3,0	1/1:14,2:21:21.04:233,21,0	0/0:17,0:17:24.06:0,24,288	1/1:11,0:12:14.85:126,15,0
chr10	84230958	.	G	GCGCA	236.06	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.492;DP=709;FS=5.740;HRun=0;HaplotypeScore=157.7631;InbreedingCoeff=0.7379;MQ=52.05;MQ0=16;MQRankSum=-4.261;QD=7.87;ReadPosRankSum=1.527;VQSLOD=2.4208;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:18.04:0,18,332	0/0:9,0:8:15.05:0,15,284	0/0:12,0:2:3.01:0,3,53	0/0:16,0:4:12.02:0,12,176	0/0:15,0:15:42.13:0,42,811	0/0:19,0:19:54.18:0,54,1089	0/0:28,0:28:33.09:0,33,608	0/0:16,0:16:43.02:0,43,748	0/0:34,0:34:67.42:0,67,1125	0/0:27,0:26:73.72:0,74,1229	0/0:13,0:13:27.06:0,27,449	0/0:32,0:32:78.20:0,78,1489	0/0:18,0:18:51.17:0,51,984	0/0:24,0:24:60.64:0,61,1119	1/1:13,17:30:17.73:326,18,0	0/0:15,0:15:29.79:0,30,467	0/0:37,0:36:71.63:0,72,1184	0/0:40,0:39:99:0,114,2137	0/0:23,0:21:63.19:0,63,1091	0/0:13,0:13:18.06:0,18,330	0/0:89,0:86:63.20:0,63,1155	0/0:20,0:19:48.16:0,48,951	0/0:14,0:13:27.09:0,27,532	0/0:43,0:42:99:0,102,2040	0/0:21,0:21:8.89:0,9,141	0/0:20,0:20:45.80:0,46,347	0/0:15,0:15:24.14:0,24,423	0/0:15,0:12:11.87:0,12,107
chr10	84231372	.	GA	G	358.59	PASS	AB=0.913;AC=3;AF=0.054;AN=56;BaseQRankSum=4.231;DP=450;FS=6.513;HRun=7;HaplotypeScore=49.4599;InbreedingCoeff=0.5879;MQ=67.38;MQ0=8;MQRankSum=0.484;QD=8.75;ReadPosRankSum=1.697;VQSLOD=0.2832;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:42.10:450,42,0	0/0:8,0:6:15.05:0,15,197	0/0:13,0:12:5.47:0,5,179	0/1:19,0:10:11.23:11,0,138	0/0:18,0:17:42.14:0,42,551	0/0:14,0:14:36.12:0,36,473	0/0:17,0:16:42.09:0,42,530	0/0:15,0:14:36.07:0,36,448	0/0:6,0:6:18.06:0,18,237	0/0:18,0:18:54.18:0,54,709	0/0:11,0:11:33.09:0,33,401	0/0:13,0:12:27.09:0,27,355	0/0:12,0:12:33.11:0,33,432	0/0:10,0:10:26.67:0,27,323	0/0:18,0:18:54.12:0,54,676	0/0:6,0:6:12.04:0,12,158	0/0:36,0:36:96.31:0,96,1260	0/0:29,0:29:75.23:0,75,963	0/0:22,0:21:57.18:0,57,746	0/0:21,0:20:57.19:0,57,746	0/0:13,0:13:36.08:0,36,443	0/0:10,0:10:27.07:0,27,340	0/0:15,0:14:33.11:0,33,433	0/0:25,0:25:69.18:0,69,885	0/0:20,0:19:48.15:0,48,615	0/0:16,0:16:45.15:0,45,589	0/0:14,0:13:36.12:0,36,474	0/0:8,0:8:24.08:0,24,316
chr10	84231425	.	T	TG	1292.98	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-4.410;DP=485;FS=6.716;HRun=3;HaplotypeScore=48.6800;InbreedingCoeff=0.9688;MQ=61.86;MQ0=23;MQRankSum=2.156;QD=34.95;ReadPosRankSum=1.900;VQSLOD=4.0937;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:36.01:0,36,401	0/0:6,0:6:15.05:0,15,180	0/0:50,0:12:27.03:0,27,287	0/0:53,0:17:16.85:0,17,302	0/0:16,0:15:45.14:0,45,540	0/0:9,0:9:24.07:0,24,288	0/0:16,0:16:42.09:0,42,478	0/0:16,0:15:42.10:0,42,475	0/0:10,0:10:30.09:0,30,360	0/0:19,0:19:57.17:0,57,684	0/0:11,0:11:30.05:0,30,344	0/0:13,0:13:36.11:0,36,431	0/0:12,0:12:36.10:0,36,420	0/0:9,0:9:24.07:0,24,288	1/1:0,14:14:39.13:546,39,0	0/0:13,0:13:39.12:0,39,468	0/0:29,0:29:81.22:0,81,956	0/0:22,0:22:57.09:0,57,641	0/0:17,0:16:39.11:0,39,458	0/0:23,0:23:66.20:0,66,792	0/0:6,0:5:15:0,15,164	0/0:7,0:7:21.06:0,21,252	0/0:8,0:8:21.06:0,21,252	0/0:24,0:24:69.20:0,69,823	0/0:23,0:23:66.20:0,66,792	1/1:0,17:17:51.17:714,51,0	0/0:19,0:18:54.16:0,54,647	1/1:1,5:5:12.04:172,12,0
chr10	84231456	.	AAAAG	A	340.05	PASS	AB=1.000;AC=5;AF=0.114;AN=44;BaseQRankSum=-1.471;DP=509;FS=7.543;HRun=0;HaplotypeScore=85.0288;InbreedingCoeff=0.5451;MQ=57.87;MQ0=27;MQRankSum=2.196;QD=5.48;ReadPosRankSum=2.506;VQSLOD=1.1581;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:0.13:0,0,235	0/0:8,0:8:5.99:0,6,50	./.	./.	0/0:16,0:16:12.03:0,12,191	0/0:12,0:12:21.07:0,21,377	0/0:15,0:14:14.84:0,15,130	./.	0/0:14,0:14:21.06:0,21,383	0/0:17,0:17:23.15:0,23,320	0/0:17,0:16:15.06:0,15,230	0/0:17,0:17:30.06:0,30,521	0/0:12,0:12:15.04:0,15,259	0/0:12,0:12:13.72:0,14,275	./.	0/0:18,0:18:15.04:0,15,249	0/0:38,0:37:13.09:0,13,192	0/0:22,0:23:12.45:0,12,131	0/0:19,0:16:15.28:0,15,228	0/0:21,0:19:15.04:0,15,206	0/0:4,0:3:3.01:0,3,55	0/0:10,0:10:11.97:0,12,157	1/1:6,6:12:3.01:45,3,0	1/1:26,0:26:36.04:399,36,0	0/0:23,0:22:3:0,3,26	./.	0/0:21,0:20:15.05:0,15,242	./.
chr10	84231511	.	AG	A	120.11	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=2.268;DP=464;FS=13.363;HRun=1;HaplotypeScore=71.2063;InbreedingCoeff=0.8256;MQ=54.85;MQ0=15;MQRankSum=-3.683;QD=10.92;ReadPosRankSum=-1.276;VQSLOD=0.1569;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.20:0,96,1224	0/0:6,0:6:15.05:0,15,217	0/0:6,0:4:5.68:0,6,40	0/0:4,0:2:3.48:0,3,39	0/0:16,0:16:48.12:0,48,662	0/0:16,0:16:48.08:0,48,681	0/0:21,0:18:51.16:0,51,693	0/0:30,0:24:68.73:0,69,820	0/0:12,0:12:36.12:0,36,535	0/0:19,0:19:57.19:0,57,835	0/0:26,0:25:72.24:0,72,1030	0/0:11,0:11:33.09:0,33,483	0/0:11,0:11:33.11:0,33,482	0/0:12,0:12:30.04:0,30,414	1/1:0,4:4:8.93:63,9,0	0/0:21,0:21:57.18:0,57,790	0/0:29,0:28:78.24:0,78,1089	0/0:29,0:29:78.21:0,78,1063	0/0:19,0:13:39.09:0,39,526	0/0:14,0:13:36.12:0,36,522	0/0:10,0:10:30.02:0,30,365	0/0:15,0:15:45.08:0,45,612	0/0:21,0:20:49.31:0,49,635	0/0:20,0:20:45.76:0,46,448	0/0:22,0:20:42.14:0,42,567	1/1:2,5:6:17.96:168,18,0	0/0:28,0:26:15.52:0,16,230	./.
chr10	84231515	.	AGAAG	A	2266.64	PASS	AB=0.972;AC=20;AF=0.357;AN=56;BaseQRankSum=10.807;DP=482;FS=4.070;HRun=0;HaplotypeScore=87.5917;InbreedingCoeff=0.1538;MQ=55.76;MQ0=9;MQRankSum=0.051;QD=8.04;ReadPosRankSum=-3.329;VQSLOD=0.9365;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:77.83:461,0,78	0/0:6,0:6:14.98:0,15,171	0/1:11,0:6:1.86:2,0,43	0/0:6,0:3:4.83:0,5,49	0/0:17,0:17:50.46:0,50,507	0/0:15,0:15:44.85:0,45,523	0/1:21,0:18:35.95:221,0,36	0/1:17,11:25:99:201,0,140	0/0:12,0:12:33.04:0,33,520	0/0:20,0:20:31.57:0,32,559	0/1:27,0:26:21.21:21,0,529	0/0:12,0:12:36.06:0,36,573	0/0:11,0:11:13.03:0,13,348	0/0:12,0:12:9.95:0,10,362	1/1:6,0:6:14.83:109,15,0	0/0:20,0:20:26.86:0,27,500	0/1:28,0:27:99:194,0,438	0/1:30,0:30:88.55:89,0,484	0/1:18,0:16:99:219,0,190	0/1:14,0:13:54.24:54,0,125	1/1:12,0:12:3.58:212,4,0	0/0:16,0:16:44.07:0,44,485	0/0:21,0:21:31.77:0,32,364	0/1:20,0:20:55.90:56,0,112	1/1:22,0:20:41.97:373,42,0	1/1:10,0:9:26.80:207,27,0	0/0:32,0:30:14.96:0,15,190	1/1:2,0:1:3:26,3,0
chr10	84231519	.	G	GGAAA	3672.74	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-0.750;DP=499;FS=0.978;HRun=0;HaplotypeScore=93.9354;InbreedingCoeff=0.7780;MQ=56.12;MQ0=7;MQRankSum=-0.786;QD=15.83;ReadPosRankSum=-2.848;VQSLOD=2.9969;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:29.88:206,0,30	0/0:6,0:6:15.04:0,15,195	0/0:14,0:8:15.89:0,16,144	0/0:6,0:3:8.51:0,9,94	0/0:18,0:18:48.15:0,48,732	0/0:18,0:18:36.08:0,36,505	1/1:23,0:20:36.09:571,36,0	1/1:23,0:22:33.08:505,33,0	0/0:12,0:12:30.08:0,30,428	0/0:20,0:20:32.17:0,32,494	0/0:27,0:26:55.82:0,56,799	0/0:12,0:12:27.08:0,27,419	0/0:11,0:11:21.07:0,21,335	0/0:11,0:11:17.99:0,18,212	0/1:7,0:7:1.20:3,0,1	0/1:22,0:22:4.40:4,0,611	0/0:28,0:27:19.15:0,19,557	0/0:29,0:29:59:0,59,863	1/1:22,0:20:39.10:596,39,0	1/1:4,10:13:27.09:386,27,0	1/1:14,0:14:36.08:537,36,0	0/0:16,0:16:38.96:0,39,602	0/0:22,0:22:54.17:0,54,787	0/0:17,0:17:39.10:0,39,550	1/1:22,0:20:36.12:632,36,0	1/1:15,0:14:17.87:108,18,0	1/1:5,26:31:2.89:73,3,0	1/1:3,0:3:8.01:50,8,0
chr10	84232496	.	A	AG	1652.85	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-0.023;DP=569;FS=1.542;HRun=8;HaplotypeScore=64.2103;InbreedingCoeff=0.9352;MQ=84.49;MQ0=0;MQRankSum=-1.648;QD=12.43;ReadPosRankSum=1.049;VQSLOD=2.9456;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,2:29:39.77:202,40,0	0/0:9,0:9:27.01:0,27,247	0/0:22,0:22:57.02:0,57,520	0/1:24,0:23:0.13:0,0,218	0/0:10,0:10:27.01:0,27,247	0/0:18,0:18:44.99:0,45,405	0/0:16,0:16:45:0,45,403	0/0:23,2:25:52.99:0,53,504	0/0:27,0:27:74.99:0,75,674	0/0:24,0:24:66.03:0,66,601	0/0:17,0:17:45.02:0,45,411	0/0:23,0:23:60:0,60,540	0/0:17,0:17:41.98:0,42,375	0/0:18,0:18:51:0,51,459	1/1:6,21:27:63.19:727,63,0	0/0:24,0:23:63.02:0,63,573	0/0:28,1:29:49.41:0,49,700	0/0:28,0:28:75.03:0,75,686	0/0:7,0:7:18.01:0,18,165	0/0:9,0:9:21.01:0,21,192	0/0:30,0:30:83.76:0,84,747	0/0:27,0:27:63.01:0,63,572	0/0:11,0:11:26.99:0,27,238	0/0:27,0:27:71.99:0,72,651	1/1:6,0:22:37.03:189,37,0	1/1:7,16:23:20.70:469,21,0	0/0:18,0:18:51:0,51,460	1/1:0,8:7:21.06:240,21,0
chr10	84232911	.	A	AG	2529.08	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.446;DP=700;FS=19.275;HRun=2;HaplotypeScore=68.8486;InbreedingCoeff=0.9984;MQ=79.42;MQ0=0;MQRankSum=-2.215;QD=36.13;ReadPosRankSum=1.970;VQSLOD=1.8937;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,159,1971	0/0:7,0:7:21.07:0,21,260	0/0:19,0:19:57.12:0,57,665	0/0:17,0:17:51.13:0,51,609	0/0:26,0:26:78.23:0,78,954	0/0:26,0:26:78.23:0,78,954	0/0:25,0:25:75.24:0,75,929	0/0:38,0:38:99:0,102,1264	0/0:30,0:30:90.28:0,90,1115	0/0:20,0:20:51.16:0,51,632	0/0:12,0:12:36.11:0,36,446	0/0:20,0:20:57.18:0,57,707	0/0:23,0:23:69.20:0,69,841	0/0:29,0:29:75.22:0,75,911	1/1:1,29:30:84.28:1210,84,0	0/0:18,0:18:51.16:0,51,632	0/0:24,0:24:72.23:0,72,893	0/0:24,0:24:69.22:0,69,854	0/0:18,0:18:48.15:0,48,587	0/0:21,0:21:60.19:0,60,744	0/0:52,0:52:99:0,153,1871	0/0:26,0:26:78.23:0,78,954	0/0:26,0:26:75.22:0,75,916	0/0:23,0:23:69.22:0,69,855	0/0:21,0:21:63.20:0,63,780	1/1:4,21:25:32.06:901,32,0	0/0:30,0:30:90.28:0,90,1116	1/1:1,14:15:39.13:561,39,0
chr10	84234585	.	GGA	G	3039.14	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.121;DP=582;FS=0.000;HRun=0;HaplotypeScore=76.7619;InbreedingCoeff=0.9061;MQ=81.79;MQ0=1;MQRankSum=-3.036;QD=27.88;ReadPosRankSum=1.147;VQSLOD=4.8670;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:72.23:916,72,0	0/0:6,0:6:12.04:0,12,201	0/0:20,0:19:33.07:0,33,503	0/0:32,0:31:56.81:0,57,919	0/0:17,0:17:45.13:0,45,700	0/0:17,0:16:45.13:0,45,702	0/0:26,0:26:69.21:0,69,1127	0/0:23,0:23:63.21:0,63,1033	0/0:21,0:21:57.19:0,57,920	0/0:13,0:13:30.10:0,30,496	0/0:9,0:9:27.09:0,27,452	0/0:21,0:21:63.20:0,63,1025	0/0:21,0:20:60.19:0,60,961	0/0:17,0:17:42.14:0,42,701	1/1:7,20:27:54.17:687,54,0	0/0:16,0:16:45.15:0,45,753	0/0:28,0:28:84.27:0,84,1373	0/0:26,0:26:66.21:0,66,1075	0/0:15,0:15:27.08:0,27,428	0/0:7,0:7:15.05:0,15,251	0/0:52,0:52:99:0,123,1987	0/0:9,0:9:21.07:0,21,351	0/0:17,0:17:36.12:0,36,597	0/0:29,3:32:1.88:0,2,1128	1/1:2,13:15:39.12:493,39,0	1/1:3,17:20:3.93:537,4,0	0/0:28,0:28:75.24:0,75,1228	1/1:4,15:19:45.14:573,45,0
chr10	84235691	.	GT	G	2674.61	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.274;DP=626;FS=4.557;HRun=2;HaplotypeScore=67.9186;InbreedingCoeff=0.9955;MQ=78.22;MQ0=0;MQRankSum=-1.804;QD=26.22;ReadPosRankSum=3.191;VQSLOD=3.3950;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:34:75.24:968,75,0	0/0:5,0:5:15:0,15,196	0/0:18,0:14:29.30:0,29,375	0/0:26,0:21:27.58:0,28,436	0/0:22,0:22:60.17:0,60,830	0/0:25,0:25:75.16:0,75,1005	0/0:31,0:31:90.18:0,90,1225	0/0:15,0:15:42.06:0,42,524	0/0:23,0:23:66.20:0,66,933	0/0:35,0:35:99:0,99,1355	0/0:10,0:10:30.06:0,30,367	0/0:19,0:19:57.18:0,57,819	0/0:18,0:18:53.86:0,54,716	0/0:25,0:25:75.18:0,75,1005	1/1:1,18:19:48.10:478,48,0	0/0:15,0:15:42.11:0,42,597	0/0:33,0:33:96.12:0,96,1224	0/0:35,0:35:99:0,102,1438	0/0:30,0:30:87.21:0,87,1175	0/0:21,0:21:63.18:0,63,865	0/0:39,0:39:99:0,111,1511	0/0:16,0:16:43.05:0,43,601	0/0:16,0:16:48.15:0,48,681	0/0:33,0:33:93.27:0,93,1307	1/1:0,22:22:54.18:697,54,0	1/1:2,14:16:45.05:438,45,0	0/0:14,0:14:39.13:0,39,575	1/1:1,10:11:27.05:269,27,0
chr10	84236284	.	A	AG	554.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.151;DP=660;FS=0.000;HRun=9;HaplotypeScore=77.4657;InbreedingCoeff=0.9743;MQ=80.23;MQ0=1;MQRankSum=-2.322;QD=12.90;ReadPosRankSum=-0.776;VQSLOD=3.2144;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,34:43:17.41:645,17,0	0/0:7,0:7:21:0,21,182	0/0:24,0:23:38.39:0,38,374	0/0:25,0:24:21.53:0,22,212	0/0:17,0:17:38.98:0,39,338	0/0:21,0:21:59.93:0,60,508	0/0:33,1:35:61.77:0,62,738	0/0:14,0:15:35.93:0,36,299	0/0:19,0:19:53.04:0,53,461	0/0:36,0:36:64.71:0,65,727	0/0:18,0:18:47.97:0,48,412	0/0:30,0:30:83.86:0,84,706	0/0:21,0:21:53.96:0,54,466	0/0:27,0:27:65.97:0,66,573	0/0:24,0:24:24.22:0,24,203	0/0:22,0:22:65.94:0,66,562	0/0:31,0:31:77.96:0,78,677	0/0:26,0:26:74.95:0,75,646	0/0:16,0:18:46.03:0,46,369	0/0:17,0:18:38.01:0,38,318	0/0:53,0:53:99:0,131,1107	0/0:23,0:23:53.95:0,54,462	0/0:17,0:17:41.64:0,42,360	0/0:29,0:29:71.50:0,72,610	0/0:17,0:17:38.77:0,39,318	0/0:17,0:17:33.83:0,34,134	0/0:20,0:19:41.88:0,42,351	0/0:7,0:7:19.14:0,19,84
chr10	84237486	.	G	GACAC	4215.40	PASS	AB=0.780;AC=17;AF=0.315;AN=54;BaseQRankSum=-4.985;DP=574;FS=2.479;HRun=0;HaplotypeScore=100.2730;InbreedingCoeff=0.6637;MQ=67.08;MQ0=3;MQRankSum=-0.922;QD=16.60;ReadPosRankSum=-2.664;VQSLOD=3.9137;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,14:39:13.55:371,14,0	0/0:8,0:8:5.99:0,6,69	0/0:22,0:14:2.05:0,2,46	./.	0/0:11,0:11:12.04:0,12,189	0/0:10,0:12:15.04:0,15,198	0/1:16,15:33:30.11:881,0,30	1/1:27,0:27:14.68:174,15,0	0/0:24,0:24:24.05:0,24,332	0/0:20,0:20:12.02:0,12,129	0/0:7,0:9:7.27:0,7,93	0/0:13,0:14:24.06:0,24,337	0/0:17,0:19:39.08:0,39,528	0/0:11,0:11:21.07:0,21,315	0/0:17,0:18:30.09:0,30,449	0/0:15,0:16:30.09:0,30,440	0/0:25,0:27:42.12:0,42,621	0/0:14,0:16:27.06:0,27,363	1/1:9,0:17:20.75:261,21,0	1/1:10,3:13:9.03:214,9,0	0/1:32,22:64:2.05:952,0,2	0/0:6,0:7:9.02:0,9,109	0/0:9,0:9:6.02:0,6,94	0/0:42,0:50:78.20:0,78,1086	1/1:11,5:17:15.52:349,16,0	0/1:20,0:20:3.30:455,0,3	1/1:5,9:19:27.03:524,27,0	1/1:3,0:3:3.01:34,3,0
chr10	84237590	.	CCCAGATCCATACTGGGA	C	1405.30	PASS	AB=0.625;AC=5;AF=0.089;AN=56;BaseQRankSum=5.534;DP=526;FS=0.000;HRun=0;HaplotypeScore=227.8377;InbreedingCoeff=0.6633;MQ=79.63;MQ0=1;MQRankSum=-5.242;QD=87.83;ReadPosRankSum=1.879;VQSLOD=3.2049;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,9564	0/0:4,0:4:12.04:0,12,837	0/0:15,0:15:45.14:0,45,2629	0/0:21,0:20:60.21:0,60,3783	0/0:23,0:23:65.82:0,66,4857	0/0:15,0:14:45.15:0,45,3127	0/0:28,0:28:84.29:0,84,6620	0/0:32,0:32:96.31:0,96,6163	0/0:12,0:12:33.10:0,33,2183	0/0:23,0:23:69.24:0,69,4776	0/0:12,0:12:36.12:0,36,2867	0/0:12,0:12:30.10:0,30,2357	0/0:18,0:18:50.41:0,50,4282	0/0:18,0:18:42.14:0,42,3308	1/1:0,8:6:18.06:922,18,0	0/0:11,0:11:33.11:0,33,2348	0/0:30,0:30:81.28:0,81,6541	0/0:22,0:21:57.20:0,57,4359	0/0:24,0:24:69.24:0,69,4826	0/0:15,0:15:45.15:0,45,3531	0/0:61,0:61:99:0,175,12823	0/0:4,0:4:12.04:0,12,939	0/0:11,0:11:33.10:0,33,2366	0/0:28,0:28:81.28:0,81,6135	0/0:16,0:16:48.14:0,48,3730	0/1:2,3:5:99:446,0,497	0/0:12,0:12:33.11:0,33,2733	1/1:0,3:3:3.01:154,3,0
chr10	84239827	.	C	CACACACACACACACACAT	2429.65	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=4.737;DP=714;FS=0.000;HRun=0;HaplotypeScore=328.1440;InbreedingCoeff=0.7765;MQ=60.74;MQ0=4;MQRankSum=-7.828;QD=28.58;ReadPosRankSum=-0.575;VQSLOD=1.2405;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:98.88:0,99,3709	0/0:7,0:7:12.03:0,12,458	0/1:32,0:18:8.71:9,0,698	0/0:34,0:24:41.45:0,41,992	0/0:17,0:17:31.01:0,31,932	0/0:30,0:30:54.14:0,54,2159	0/0:24,0:24:54.15:0,54,2074	0/0:35,0:34:68.69:0,69,2198	0/0:25,0:25:66.20:0,66,2727	0/0:15,0:15:39.11:0,39,1364	0/0:22,0:22:51.16:0,51,1836	0/0:10,0:9:12.04:0,12,594	0/0:28,0:28:54.19:0,54,2612	0/0:14,0:14:39.09:0,39,1559	1/1:9,3:18:19.24:1534,19,0	0/0:20,0:20:48.10:0,48,1810	0/0:39,0:39:84.22:0,84,3632	0/0:22,0:22:57.13:0,57,2206	0/0:20,0:19:33.09:0,33,1077	0/0:20,0:20:48.02:0,48,1903	0/0:64,0:64:99:0,162,6169	0/0:28,0:28:66.21:0,66,2756	0/0:13,0:13:27.06:0,27,864	0/0:41,0:41:96.17:0,96,3692	0/0:18,0:18:48.16:0,48,2060	1/1:27,0:26:6.28:734,6,0	0/0:26,0:26:69.20:0,69,2798	1/1:8,0:8:9.03:285,9,0
chr10	84240177	.	GATTTT	G	3568.75	PASS	AB=0.517;AC=5;AF=0.089;AN=56;BaseQRankSum=11.070;DP=585;FS=3.072;HRun=0;HaplotypeScore=116.0059;InbreedingCoeff=0.7734;MQ=76.82;MQ0=2;MQRankSum=-6.231;QD=55.76;ReadPosRankSum=1.186;VQSLOD=4.3206;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,2972	0/0:5,0:5:15.04:0,15,423	0/0:44,0:34:75.41:0,75,1541	0/0:39,0:34:72.47:0,72,1644	0/0:27,0:27:78.17:0,78,2296	0/0:13,0:13:39.01:0,39,895	0/0:12,0:12:36.04:0,36,987	0/0:26,0:26:75.24:0,75,2229	0/0:14,0:14:42.12:0,42,1164	0/0:22,0:22:66.21:0,66,1982	0/0:23,0:23:66.19:0,66,1867	0/0:16,0:16:48.11:0,48,1491	0/0:18,0:18:51.14:0,51,1500	0/0:15,0:15:45.15:0,45,1492	1/1:0,24:24:57.20:1313,57,0	0/0:9,0:9:27.07:0,27,748	0/0:33,0:32:87.16:0,87,2529	0/0:25,0:25:75.15:0,75,2162	0/0:17,0:17:51.15:0,51,1518	0/0:17,0:17:51.16:0,51,1613	0/0:24,0:24:72.08:0,72,1890	0/0:16,0:16:42.06:0,42,956	0/0:13,0:13:36.09:0,36,1081	0/0:20,0:20:57.11:0,57,1515	0/0:15,0:15:42.11:0,42,1245	0/1:2,29:31:99:1701,0,109	0/0:19,0:19:57.16:0,57,1701	1/1:0,9:9:24.08:555,24,0
chr10	84240487	.	A	AC	597.45	PASS	AB=0.585;AC=1;AF=0.018;AN=56;BaseQRankSum=-1.485;DP=587;FS=20.575;HRun=4;HaplotypeScore=56.2934;InbreedingCoeff=-0.0303;MQ=50.34;MQ0=74;MQRankSum=-1.094;QD=15.72;ReadPosRankSum=-1.014;VQSLOD=1.8245;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:11,27:38:68.77:672,0,69	0/0:3,0:3:9.03:0,9,102	0/0:31,0:3:2.94:0,3,34	0/0:36,0:10:16.04:0,16,188	0/0:16,0:13:18.05:0,18,204	0/0:15,0:14:33.09:0,33,374	0/0:34,0:28:78.19:0,78,863	0/0:11,0:8:18.05:0,18,204	0/0:24,0:20:45.13:0,45,510	0/0:19,0:16:36.10:0,36,408	0/0:11,0:11:21.03:0,21,238	0/0:23,0:23:51.61:0,52,576	0/0:17,0:13:33.07:0,33,356	0/0:20,0:17:36.10:0,36,408	0/0:29,0:29:68.88:0,69,781	0/0:15,0:13:33.09:0,33,374	0/0:24,0:20:33.09:0,33,374	0/0:22,0:18:48.14:0,48,542	0/0:14,0:8:17.88:0,18,184	0/0:12,0:9:18.05:0,18,203	0/0:45,0:37:93.47:0,93,1032	0/0:15,0:11:24.07:0,24,269	0/0:7,0:6:9.03:0,9,102	0/0:48,0:38:32.80:0,33,895	0/0:13,0:13:36.10:0,36,405	0/0:18,0:18:33.09:0,33,374	0/0:17,0:14:42.12:0,42,476	0/0:10,0:10:30.09:0,30,340
chr10	84240546	.	C	CT	613.06	PASS	AB=0.705;AC=3;AF=0.060;AN=50;BaseQRankSum=6.746;DP=458;FS=26.498;HRun=0;HaplotypeScore=48.8885;InbreedingCoeff=-0.1039;MQ=38.63;MQ0=104;MQRankSum=-6.762;QD=10.57;ReadPosRankSum=0.220;VQSLOD=1.8209;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:6:12.04:0,12,168	0/0:5,0:1:3.01:0,3,42	./.	./.	0/0:9,0:2:3.01:0,3,42	0/0:20,0:11:30.07:0,30,370	0/0:21,0:8:24.04:0,24,284	0/0:9,0:2:6.02:0,6,84	0/0:23,0:12:30.06:0,30,368	0/0:10,0:2:6.02:0,6,84	0/0:5,0:3:9.02:0,9,110	0/0:28,0:23:60.63:0,61,810	0/0:13,0:5:12.04:0,12,167	0/0:25,0:16:36.11:0,36,486	0/1:15,19:30:37.79:543,0,38	0/0:13,0:8:24.07:0,24,317	0/0:31,0:23:60.20:0,60,837	0/0:22,0:18:27.20:0,27,529	./.	0/0:11,0:4:9.03:0,9,126	0/0:26,0:10:24.06:0,24,304	0/0:10,0:5:12.04:0,12,167	0/0:12,0:4:12.03:0,12,150	0/0:45,0:32:81.21:0,81,1061	0/0:4,0:4:12.02:0,12,136	0/1:13,6:14:81.94:129,0,82	0/0:9,0:3:9.02:0,9,109	0/1:3,2:5:38.76:39,0,75
chr10	84240565	.	C	CT	1520.45	PASS	AB=0.685;AC=4;AF=0.074;AN=54;BaseQRankSum=9.004;DP=581;FS=25.361;HRun=0;HaplotypeScore=61.7355;InbreedingCoeff=0.3711;MQ=42.86;MQ0=87;MQRankSum=-9.029;QD=18.32;ReadPosRankSum=1.855;VQSLOD=2.7188;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:16:27.06:0,27,328	0/0:6,0:2:6.01:0,6,68	0/0:18,0:2:6.02:0,6,81	./.	0/0:17,0:11:27.07:0,27,344	0/0:26,0:19:57.13:0,57,702	0/0:18,0:10:27.09:0,27,376	0/0:10,0:5:15.04:0,15,194	0/0:31,0:19:49.36:0,49,605	0/0:13,0:4:12.04:0,12,168	0/0:8,0:6:18.02:0,18,215	0/0:26,0:21:63.16:0,63,809	0/0:17,0:10:30.02:0,30,346	0/0:30,0:20:56.19:0,56,727	1/1:7,30:33:69.23:1057,69,0	0/0:17,0:12:31.56:0,32,442	0/0:38,0:30:75.19:0,75,1008	0/0:31,1:28:75.17:0,75,994	0/0:15,0:6:15.05:0,15,209	0/0:10,0:4:9.03:0,9,126	0/0:35,0:24:57.10:0,57,710	0/0:20,0:12:33.10:0,33,445	0/0:14,0:8:24.04:0,24,313	0/0:39,0:27:78.23:0,78,1055	0/0:9,0:9:21.07:0,21,293	0/1:22,16:31:99:497,0,289	0/0:10,0:5:15.05:0,15,210	0/1:4,4:8:71.68:81,0,72
chr10	84240584	.	C	CT	2712.32	PASS	AB=0.547;AC=4;AF=0.071;AN=56;BaseQRankSum=9.236;DP=678;FS=33.130;HRun=0;HaplotypeScore=70.8441;InbreedingCoeff=0.4293;MQ=50.81;MQ0=50;MQRankSum=-9.338;QD=28.25;ReadPosRankSum=2.348;VQSLOD=1.9907;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:31:54.17:0,54,890	0/0:6,0:5:9.03:0,9,126	0/0:23,0:7:21.07:0,21,287	0/0:22,0:5:9.03:0,9,115	0/0:21,0:16:45.12:0,45,595	0/0:29,0:23:63.19:0,63,848	0/0:22,0:18:54.18:0,54,755	0/0:15,0:13:36.05:0,36,449	0/0:32,0:27:78.24:0,78,1056	0/0:19,0:14:36.11:0,36,475	0/0:15,0:13:35.85:0,36,472	0/0:29,0:25:72.22:0,72,963	0/0:21,0:15:42.14:0,42,587	0/0:33,0:28:78.24:0,78,1051	1/1:1,42:39:84.29:1325,84,0	0/0:17,0:15:45.13:0,45,597	0/0:40,0:36:99:0,99,1363	0/0:35,1:35:93.24:0,93,1259	0/0:19,0:15:43.31:0,43,501	0/0:14,0:10:18.04:0,18,233	0/0:38,0:33:90.28:0,90,1225	0/0:20,0:14:38.85:0,39,497	0/0:10,0:9:27.09:0,27,377	0/0:33,0:31:88.54:0,89,1219	0/0:17,0:17:45.15:0,45,629	0/1:10,34:39:62.81:1282,0,63	0/0:16,0:14:42.11:0,42,549	0/1:1,8:9:22.81:220,0,23
chr10	84240785	.	CAA	C	694.64	PASS	AB=0.917;AC=7;AF=0.125;AN=56;BaseQRankSum=7.143;DP=575;FS=9.803;HRun=14;HaplotypeScore=86.6211;InbreedingCoeff=0.7664;MQ=71.26;MQ0=0;MQRankSum=-1.283;QD=11.20;ReadPosRankSum=4.436;VQSLOD=1.9088;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:27:62.15:0,62,777	0/0:13,0:14:39.10:0,39,499	0/1:10,1:9:5.03:5,0,109	0/0:14,0:15:9.43:0,9,48	0/0:19,0:25:67.05:0,67,821	0/0:24,0:27:50.64:0,51,649	0/0:18,0:18:46.95:0,47,614	0/0:25,0:30:73.61:0,74,862	0/0:19,0:19:51.13:0,51,660	0/0:24,0:26:59.66:0,60,762	0/0:16,0:16:27.06:0,27,332	0/0:24,0:24:66.17:0,66,840	0/0:14,0:16:39.08:0,39,492	0/0:14,0:14:30.01:0,30,345	1/1:4,14:20:7.74:300,8,0	0/0:18,0:19:50.64:0,51,644	0/0:20,0:23:58.63:0,59,703	0/0:21,0:22:50.64:0,51,658	0/0:17,0:18:42.10:0,42,520	0/0:12,1:14:1.28:0,1,252	0/0:18,0:21:38.60:0,39,478	0/0:21,0:24:59.60:0,60,723	0/0:18,0:20:41.55:0,42,486	0/0:26,1:35:47.71:0,48,804	0/0:6,0:18:33.03:0,33,328	1/1:8,14:22:38.93:361,39,0	0/0:24,0:25:59.63:0,60,724	1/1:3,6:9:17.96:167,18,0
chr10	84241505	.	C	CT	9993.82	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.323;DP=529;FS=4.726;HRun=2;HaplotypeScore=454.4692;InbreedingCoeff=0.7308;MQ=41.46;MQ0=0;MQRankSum=-2.471;QD=19.15;ReadPosRankSum=2.115;VQSLOD=2.0403;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,23:36:45.04:660,45,0	1/1:7,5:12:12.51:169,13,0	0/0:4,0:4:2.97:0,3,20	0/0:3,0:3:6:0,6,60	1/1:7,11:18:23.99:275,24,0	1/1:6,10:16:19.91:234,20,0	1/1:5,10:15:30.01:375,30,0	1/1:18,9:27:25.86:307,26,0	1/1:10,21:31:58.12:784,58,0	1/1:16,9:25:30.09:409,30,0	1/1:6,18:24:40.58:405,41,0	1/1:12,9:21:24.55:337,25,0	1/1:7,15:22:42.54:544,43,0	1/1:8,12:20:33.01:397,33,0	1/1:8,21:29:57.66:787,58,0	1/1:13,20:33:57.66:798,58,0	1/1:5,9:14:20.64:293,21,0	1/1:4,2:6:6.01:69,6,0	1/1:8,10:18:30.10:425,30,0	1/1:12,21:33:48.28:545,48,0	1/1:9,7:16:15.44:155,15,0	1/1:6,12:18:19.47:252,19,0	1/1:5,12:17:20.69:193,21,0	1/1:5,9:14:11.06:129,11,0	1/1:4,11:15:30.49:375,30,0	1/1:6,13:19:39.13:548,39,0	1/1:5,9:14:24.52:315,25,0	1/1:3,6:9:15.05:211,15,0
chr10	84241511	.	G	GC	12286.93	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.540;DP=319;FS=0.000;HRun=0;HaplotypeScore=373.4721;InbreedingCoeff=0.7586;MQ=40.47;MQ0=0;MQRankSum=-2.984;QD=39.01;ReadPosRankSum=1.229;VQSLOD=2.7760;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:66.03:847,66,0	1/1:0,5:5:15.05:209,15,0	0/0:2,0:2:3:0,3,26	0/0:2,0:2:6:0,6,65	1/1:0,11:11:21.07:293,21,0	1/1:0,11:11:30.10:422,30,0	1/1:0,10:10:30.10:418,30,0	1/1:0,9:9:25.85:303,26,0	1/1:0,21:21:60.20:834,60,0	1/1:0,9:9:27.09:375,27,0	1/1:0,18:18:51.16:703,51,0	1/1:0,9:9:27.09:373,27,0	1/1:0,15:15:45.15:623,45,0	1/1:0,12:12:36.12:501,36,0	1/1:0,21:21:63.21:863,63,0	1/1:0,20:20:60.20:832,60,0	1/1:0,9:9:23.73:305,24,0	1/1:0,2:2:6.01:68,6,0	1/1:0,10:10:30.10:421,30,0	1/1:0,21:21:63.21:876,63,0	1/1:0,7:7:18.06:241,18,0	1/1:0,12:12:36.12:495,36,0	1/1:0,12:12:33.11:465,33,0	1/1:0,9:9:15.04:192,15,0	1/1:0,11:11:33.11:461,33,0	1/1:0,13:13:39.13:540,39,0	1/1:0,9:9:27.09:375,27,0	1/1:0,6:6:18.06:252,18,0
chr10	84241519	.	G	GC	4047.44	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.430;DP=319;FS=3.594;HRun=0;HaplotypeScore=402.8125;InbreedingCoeff=0.7028;MQ=40.47;MQ0=0;MQRankSum=-3.151;QD=12.85;ReadPosRankSum=2.149;VQSLOD=2.6441;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:53.82:340,54,0	1/1:0,5:5:14.16:71,14,0	0/0:2,0:2:2.92:0,3,17	0/0:2,0:2:5.99:0,6,62	1/1:0,11:11:19.21:130,19,0	1/1:0,11:11:27.91:131,28,0	1/1:0,10:10:27.71:125,28,0	1/1:0,9:9:16.61:112,17,0	1/1:0,21:21:56.08:264,56,0	1/1:0,9:9:26.50:171,26,0	1/1:0,18:18:45.08:186,45,0	1/1:0,9:9:21.43:95,21,0	1/1:0,15:15:42.03:198,42,0	1/1:0,12:12:32.70:143,33,0	1/1:0,21:21:45.15:251,45,0	1/1:0,20:20:55.91:259,56,0	1/1:0,9:9:21.41:100,21,0	1/1:0,2:2:3.83:20,4,0	1/1:0,10:10:29.58:192,30,0	1/1:0,21:21:57.92:279,58,0	1/1:0,7:7:16.70:109,17,0	1/1:0,12:12:32.31:135,32,0	1/1:0,12:12:26.09:138,26,0	1/1:0,9:9:7.65:34,8,0	1/1:0,11:11:30.69:143,31,0	1/1:0,13:13:38.03:221,38,0	1/1:0,9:9:24.45:110,24,0	1/1:0,6:6:17.22:90,17,0
chr10	84241710	.	T	TA	1565.32	PASS	AB=0.806;AC=20;AF=0.357;AN=56;BaseQRankSum=-0.811;DP=600;FS=2.693;HRun=13;HaplotypeScore=97.8486;InbreedingCoeff=0.6140;MQ=60.84;MQ0=0;MQRankSum=-0.406;QD=6.02;ReadPosRankSum=-3.197;VQSLOD=2.1220;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:31:12.48:0,12,314	0/0:5,0:5:11.84:0,12,81	0/1:34,0:22:4.01:4,0,92	0/1:23,0:17:11.25:11,0,36	0/0:26,0:28:53.66:0,54,345	0/0:18,0:20:36.71:0,37,237	0/1:9,13:24:28.11:164,0,28	1/1:17,19:36:30.66:393,31,0	0/0:19,0:20:7:0,7,152	0/0:25,1:27:12.81:0,13,240	0/0:23,1:24:9.97:0,10,205	0/0:19,2:22:13.85:0,14,214	0/0:14,0:16:15.04:0,15,149	0/0:16,2:19:8.44:0,8,187	1/1:10,0:10:19.82:124,20,0	0/0:25,0:25:37.55:0,38,250	0/0:13,1:16:8.67:0,9,169	0/0:22,0:22:20.34:0,20,198	1/1:6,14:20:30.97:299,31,0	1/1:7,15:23:29.75:247,30,0	1/1:3,8:12:14.85:126,15,0	0/0:17,0:18:20.16:0,20,130	0/0:21,1:23:8.12:0,8,178	0/0:22,1:23:12.68:0,13,219	1/1:10,0:10:11.86:85,12,0	1/1:26,0:24:8.07:40,8,0	0/1:9,16:25:22.61:238,0,23	1/1:15,0:15:7.11:29,7,0
chr10	84241733	.	A	AC	354.67	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.371;DP=535;FS=21.858;HRun=1;HaplotypeScore=82.3773;InbreedingCoeff=0.9666;MQ=68.81;MQ0=0;MQRankSum=-2.977;QD=13.64;ReadPosRankSum=-0.665;VQSLOD=1.3659;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.27:0,90,1129	0/0:6,0:6:15.05:0,15,192	0/0:37,0:23:59.66:0,60,616	0/0:25,1:20:24.91:0,25,296	0/0:24,0:23:60.19:0,60,769	0/0:18,0:18:54.13:0,54,646	0/0:20,0:20:54.12:0,54,620	0/0:29,0:29:78.22:0,78,951	0/0:15,0:15:42.11:0,42,512	0/0:23,0:23:69.21:0,69,862	0/0:21,0:21:51.10:0,51,611	0/0:19,0:19:51.13:0,51,616	0/0:19,0:19:54.15:0,54,665	0/0:17,0:17:45.13:0,45,556	1/1:5,1:10:24.92:200,25,0	0/0:21,0:21:60.16:0,60,712	0/0:20,0:20:35.83:0,36,569	0/0:15,0:15:43.35:0,43,510	0/0:26,0:25:69.12:0,69,787	0/0:30,0:30:87.16:0,87,1024	0/0:13,0:12:23.98:0,24,285	0/0:11,0:11:30.10:0,30,385	0/0:15,0:15:40.64:0,41,476	0/0:19,0:19:47.88:0,48,542	0/0:9,0:11:20.16:0,20,153	1/1:9,1:11:9.84:151,10,0	0/0:22,0:22:48.04:0,48,525	1/1:4,1:5:14.92:139,15,0
chr10	84241951	.	T	TA	2994.67	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.305;DP=511;FS=0.432;HRun=6;HaplotypeScore=49.4717;InbreedingCoeff=0.9723;MQ=73.65;MQ0=0;MQRankSum=0.224;QD=27.99;ReadPosRankSum=-3.181;VQSLOD=2.7108;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.19:0,84,854	0/0:6,0:6:15.03:0,15,153	0/0:18,0:17:40.54:0,41,415	0/0:10,0:10:6.13:0,6,95	0/0:26,0:26:69.15:0,69,704	0/0:27,0:27:66.15:0,66,673	1/1:1,11:12:30.05:360,30,0	1/1:3,17:20:51.12:602,51,0	0/0:14,0:14:39.09:0,39,398	0/0:22,0:22:63.14:0,63,641	0/0:21,0:21:57.13:0,57,581	0/0:20,0:20:54.12:0,54,551	0/0:15,0:15:45.09:0,45,452	0/0:15,0:15:42.10:0,42,428	0/0:19,0:19:51.11:0,51,520	0/0:16,0:16:42.08:0,42,422	0/0:30,0:30:84.15:0,84,844	0/0:20,0:20:57.11:0,57,573	1/1:3,21:24:63.15:752,63,0	1/1:3,10:13:24.08:300,24,0	1/1:0,13:13:27.09:340,27,0	0/0:6,0:6:15.03:0,15,153	0/0:14,0:14:42.10:0,42,428	0/0:17,0:17:48.11:0,48,490	0/0:19,0:19:45.06:0,45,449	0/0:28,0:28:84.17:0,84,849	1/1:1,23:25:66.21:829,66,0	0/0:10,0:10:30.07:0,30,306
chr10	84242209	.	T	TA	1768.48	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-2.470;DP=415;FS=6.627;HRun=6;HaplotypeScore=44.0855;InbreedingCoeff=0.9110;MQ=66.48;MQ0=0;MQRankSum=-0.282;QD=29.97;ReadPosRankSum=2.697;VQSLOD=4.1148;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:99:0,105,1069	0/0:3,0:3:9.02:0,9,92	0/0:9,0:7:17.98:0,18,166	0/0:9,0:7:17.40:0,17,160	0/0:21,0:21:54.04:0,54,538	0/0:30,0:30:84.19:0,84,856	0/0:6,0:6:12.02:0,12,122	0/0:22,0:22:54.07:0,54,525	0/0:13,0:13:33.05:0,33,329	0/0:12,0:12:33.07:0,33,333	0/0:20,0:20:57.08:0,57,564	0/0:8,0:8:21:0,21,214	0/0:12,0:12:36.08:0,36,367	0/0:8,0:8:24.05:0,24,245	1/1:0,13:13:33.11:413,33,0	0/0:9,0:9:27.05:0,27,266	0/0:15,0:15:27.05:0,27,269	0/0:19,0:19:48.11:0,48,489	0/0:13,0:13:33.06:0,33,330	0/0:19,0:19:45.07:0,45,450	0/0:4,0:4:12.02:0,12,117	0/0:2,0:2:6.01:0,6,61	0/0:12,0:12:33.07:0,33,336	0/0:7,0:7:15.03:0,15,153	0/0:14,0:14:39.09:0,39,397	1/1:3,25:28:75.23:931,75,0	0/0:28,0:28:81.17:0,81,821	1/1:1,17:18:45.14:566,45,0
chr10	84242610	.	TA	T	1871.40	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.153;DP=452;FS=0.000;HRun=5;HaplotypeScore=55.6616;InbreedingCoeff=0.9011;MQ=69.09;MQ0=5;MQRankSum=-1.644;QD=33.42;ReadPosRankSum=2.732;VQSLOD=3.9828;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:60.16:0,60,815	0/0:7,0:7:18.06:0,18,269	0/0:25,1:11:12.22:0,12,246	0/0:26,0:12:2.60:0,3,111	0/0:23,0:23:69.23:0,69,1030	0/0:17,0:17:51.16:0,51,744	0/0:18,0:18:54.16:0,54,771	0/0:25,0:25:72.22:0,72,1025	0/0:13,0:13:33.10:0,33,477	0/0:16,0:16:48.15:0,48,683	0/0:13,0:13:39.09:0,39,541	0/0:6,0:6:18.06:0,18,270	0/0:9,0:9:27.09:0,27,402	0/0:10,0:10:30.10:0,30,444	1/1:0,16:16:45.15:579,45,0	0/0:9,0:9:24.08:0,24,360	0/0:25,0:25:72.24:0,72,1071	0/0:15,0:15:42.14:0,42,627	0/0:14,0:14:39.11:0,39,544	0/0:23,0:23:69.22:0,69,1012	0/0:5,0:5:15.05:0,15,225	0/0:4,0:4:12.04:0,12,180	0/0:19,0:19:57.19:0,57,851	0/0:10,0:10:30.08:0,30,425	0/0:12,0:12:36.12:0,36,519	1/1:2,19:21:15.22:693,15,0	0/0:23,0:23:69.23:0,69,1016	1/1:0,19:19:57.19:739,57,0
chr10	84243230	.	CT	C	4564.24	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=1.932;DP=499;FS=3.639;HRun=1;HaplotypeScore=302.2647;InbreedingCoeff=-0.0626;MQ=55.16;MQ0=0;MQRankSum=-2.037;QD=9.15;ReadPosRankSum=2.505;VQSLOD=2.8523;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:44.04:180,44,0	1/1:11,0:11:29.67:130,30,0	0/1:7,0:7:23.48:23,0,73	0/1:11,0:11:28.99:66,0,29	1/1:19,1:20:43.24:212,43,0	1/1:23,0:23:41.69:167,42,0	1/1:20,0:20:48.57:213,49,0	1/1:20,0:20:4.34:168,4,0	1/1:18,0:18:45.52:203,46,0	1/1:24,0:24:41.28:276,41,0	1/1:22,0:22:42.07:168,42,0	1/1:26,0:26:58.44:287,58,0	1/1:19,0:19:43.39:199,43,0	1/1:17,0:17:43.39:176,43,0	1/1:27,0:27:51.39:200,51,0	1/1:21,0:21:27.90:167,28,0	1/1:13,0:13:8.71:84,9,0	0/1:5,0:5:8.71:23,0,9	1/1:14,0:14:35.09:174,35,0	1/1:23,2:25:60.16:241,60,0	1/1:7,0:7:13.24:59,13,0	1/1:22,0:22:48.89:226,49,0	1/1:22,0:22:30.15:140,30,0	1/1:7,0:7:9.89:45,10,0	1/1:13,0:13:29.05:120,29,0	1/1:25,0:25:16.23:248,16,0	1/1:29,1:28:52.86:323,53,0	1/1:5,0:5:8.49:47,8,0
chr10	84244392	.	AT	A	1264.94	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=9.699;DP=304;FS=8.088;HRun=10;HaplotypeScore=37.4337;InbreedingCoeff=0.6618;MQ=62.26;MQ0=18;MQRankSum=-0.985;QD=16.22;ReadPosRankSum=1.219;VQSLOD=3.1727;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,29:31:74.01:631,74,0	0/1:4,0:3:16.41:16,0,27	0/0:6,0:4:3.01:0,3,33	0/0:8,0:5:5.79:0,6,37	0/0:14,0:13:24.03:0,24,243	0/0:18,1:19:12.88:0,13,351	0/0:11,0:11:24.05:0,24,257	0/0:27,0:27:48.13:0,48,528	0/0:6,0:5:9.02:0,9,100	0/0:10,0:10:27.07:0,27,299	0/0:7,0:7:18.01:0,18,186	0/0:3,0:3:6.02:0,6,66	0/0:4,0:4:12.03:0,12,133	0/0:7,0:5:15.01:0,15,153	1/1:1,9:10:23.99:208,24,0	0/0:3,0:3:9.02:0,9,100	0/0:23,0:21:51.11:0,51,552	0/0:19,0:17:33.09:0,33,364	0/0:6,0:5:15.04:0,15,166	0/0:12,0:11:24.05:0,24,257	0/0:3,0:3:9.02:0,9,100	0/0:5,0:4:9.02:0,9,100	0/0:7,0:6:15.04:0,15,166	0/0:14,0:14:30.08:0,30,332	0/0:3,0:3:4.74:0,5,17	1/1:4,12:16:5.80:278,6,0	0/0:8,0:8:15:0,15,152	1/1:3,12:13:32.99:286,33,0
chr10	84244638	.	TC	T	275.65	PASS	AB=0.785;AC=8;AF=0.160;AN=50;BaseQRankSum=3.941;DP=165;FS=17.593;HRun=6;HaplotypeScore=43.6428;InbreedingCoeff=-0.0606;MQ=40.56;MQ0=4;MQRankSum=-2.665;QD=5.74;ReadPosRankSum=0.252;VQSLOD=-0.4562;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:3,2:6:25.22:80,0,25	0/0:5,0:5:6.02:0,6,79	0/0:14,0:4:7.26:0,7,74	0/0:18,1:2:6.02:0,6,72	0/0:4,0:4:9.03:0,9,118	0/0:5,0:5:15.03:0,15,181	0/0:3,0:3:9.03:0,9,116	0/0:9,1:10:15.48:0,15,195	0/0:2,0:2:3.01:0,3,39	0/0:4,0:5:12.04:0,12,158	0/0:7,0:7:21.07:0,21,275	0/0:5,1:6:1.37:0,1,57	./.	0/0:2,0:2:6.02:0,6,79	0/1:8,2:10:86.24:86,0,113	0/0:2,0:2:6.02:0,6,79	0/1:7,0:7:18.21:18,0,173	0/0:5,0:5:11.99:0,12,135	0/1:4,1:5:28.76:29,0,69	0/0:5,1:6:12.04:0,12,157	1/1:3,1:3:3.01:30,3,0	./.	0/0:6,0:6:11.77:0,12,157	0/0:6,2:8:8.84:0,9,118	./.	0/1:3,1:4:16.90:22,0,17	0/0:3,0:3:6.02:0,6,78	0/1:6,5:11:8.08:135,0,8
chr10	84244642	.	C	CTT	647.74	PASS	AB=0.924;AC=10;AF=0.192;AN=52;BaseQRankSum=5.959;DP=189;FS=34.985;HRun=0;HaplotypeScore=56.2450;InbreedingCoeff=0.2603;MQ=40.48;MQ0=6;MQRankSum=-3.456;QD=9.53;ReadPosRankSum=3.707;VQSLOD=1.6115;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:9:40.88:43,0,41	0/0:5,0:5:6.02:0,6,98	0/1:17,0:4:0.41:0,0,105	0/0:21,0:2:6.02:0,6,81	0/0:4,0:4:9.03:0,9,147	0/0:8,0:7:18.05:0,18,268	0/0:4,0:4:12.04:0,12,190	0/0:12,0:11:19.30:0,19,275	0/0:2,0:2:3.01:0,3,49	0/0:5,0:5:11.81:0,12,195	0/0:8,0:8:24.08:0,24,389	0/0:8,0:8:1.31:0,1,243	0/0:2,0:2:3.01:0,3,40	0/0:2,0:2:6.02:0,6,98	0/1:8,3:11:99:197,0,141	0/0:3,0:2:6.02:0,6,98	0/1:9,0:9:5.17:5,0,262	0/0:9,0:8:14.52:0,15,171	0/0:5,0:5:1.75:0,2,92	0/0:6,0:6:11.77:0,12,195	1/1:3,0:3:2.04:6,2,0	./.	0/0:6,0:6:11.88:0,12,195	0/0:8,0:8:8.92:0,9,146	./.	1/1:3,3:6:12.01:199,12,0	0/0:3,0:3:9.03:0,9,135	1/1:7,4:11:16.16:328,16,0
chr10	84244737	.	CAG	C	174.33	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.734;DP=251;FS=0.000;HRun=0;HaplotypeScore=33.8218;InbreedingCoeff=0.6027;MQ=74.95;MQ0=0;MQRankSum=-1.810;QD=21.79;ReadPosRankSum=0.484;VQSLOD=3.3220;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:6.02:0,6,112	0/0:2,0:2:6.02:0,6,112	0/0:5,0:6:16.30:0,16,283	0/0:16,0:15:45.11:0,45,714	0/0:13,0:13:36.12:0,36,665	0/0:17,0:16:51.16:0,51,922	0/0:2,0:2:6.02:0,6,112	0/0:10,0:10:27.07:0,27,427	0/0:9,0:9:27.09:0,27,498	0/0:13,0:13:39.13:0,39,696	0/0:15,0:15:42.13:0,42,738	0/0:10,0:10:27.08:0,27,460	0/0:3,0:3:9.03:0,9,169	0/0:6,0:6:18.06:0,18,330	0/0:5,0:5:15.05:0,15,257	0/0:8,0:8:24.08:0,24,433	0/0:22,0:22:60.21:0,60,1097	0/0:20,0:20:60.21:0,60,1114	0/0:5,0:5:12.01:0,12,185	0/0:7,0:7:21.07:0,21,385	0/0:8,0:8:15.05:0,15,265	0/0:2,0:2:6.01:0,6,81	0/0:10,0:10:30.10:0,30,543	0/0:9,0:9:27.09:0,27,505	1/1:0,8:8:18.06:265,18,0	0/0:10,0:10:30.10:0,30,560	0/0:5,0:5:12.03:0,12,193	0/0:6,0:6:18.05:0,18,295
chr10	84245453	.	C	CTTAG	7383.41	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-11.740;DP=667;FS=6.587;HRun=0;HaplotypeScore=106.0084;InbreedingCoeff=0.9988;MQ=74.57;MQ0=0;MQRankSum=-6.117;QD=67.12;ReadPosRankSum=2.591;VQSLOD=7.3493;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,23:30:81.23:1970,81,0	0/0:7,0:7:21.07:0,21,392	0/0:24,0:22:54.18:0,54,948	0/0:37,0:31:63.16:0,63,1121	0/0:31,0:31:84.26:0,84,1494	0/0:26,0:26:72.25:0,72,1328	0/0:11,0:11:33.11:0,33,612	0/0:23,0:23:60.18:0,60,1033	0/0:27,0:27:72.25:0,72,1338	0/0:28,0:28:78.26:0,78,1425	0/0:20,0:20:57.18:0,57,1033	0/0:19,0:19:48.15:0,48,858	0/0:17,0:17:51.17:0,51,950	0/0:27,0:27:72.25:0,72,1343	1/1:4,37:41:99:2959,114,0	0/0:19,0:19:54.19:0,54,1007	0/0:23,0:22:54.17:0,54,976	0/0:23,0:23:48.16:0,48,890	0/0:22,0:22:63.19:0,63,1116	0/0:33,0:33:84.26:0,84,1465	0/0:19,0:19:54.19:0,54,1008	0/0:28,0:28:81.26:0,81,1475	0/0:27,0:27:66.23:0,66,1222	0/0:26,0:25:69.24:0,69,1273	0/0:22,0:21:54.19:0,54,1004	1/1:3,16:19:51.18:1335,51,0	0/0:18,0:17:48.15:0,48,860	1/1:3,17:20:42.14:1119,42,0
chr10	84245705	.	TC	T	6498.99	PASS	AC=52;AF=1.000;AN=52;DP=320;FS=0.000;HRun=6;HaplotypeScore=220.0965;InbreedingCoeff=-0.0169;MQ=36.18;MQ0=0;QD=20.50;VQSLOD=2.0768;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,6:12:18.04:188,18,0	./.	1/1:4,0:3:5.85:50,6,0	./.	1/1:3,13:16:5.98:62,6,0	1/1:5,11:16:30.06:309,30,0	1/1:3,18:21:54.10:548,54,0	1/1:4,9:13:30.06:309,30,0	1/1:4,10:14:30.03:301,30,0	1/1:5,11:16:33.04:336,33,0	1/1:4,7:11:12.02:120,12,0	1/1:6,12:18:36.08:371,36,0	1/1:4,9:13:27.06:277,27,0	1/1:4,11:15:33.07:339,33,0	1/1:2,10:12:30.05:304,30,0	1/1:2,6:8:18.04:187,18,0	1/1:5,9:14:29.98:298,30,0	1/1:1,8:9:23.95:237,24,0	1/1:0,13:13:39:384,39,0	1/1:2,9:11:21.04:216,21,0	1/1:5,7:12:14.78:127,15,0	1/1:1,8:9:24.05:248,24,0	1/1:2,8:10:21.04:210,21,0	1/1:1,1:2:3.01:30,3,0	1/1:2,11:13:30.04:296,30,0	1/1:4,11:15:27.06:286,27,0	1/1:3,12:15:30.06:310,30,0	1/1:0,5:5:15.04:157,15,0
chr10	84245766	.	C	CT	733.89	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=0.341;DP=364;FS=21.736;HRun=10;HaplotypeScore=116.3779;InbreedingCoeff=0.7950;MQ=70.53;MQ0=1;MQRankSum=-2.377;QD=10.79;ReadPosRankSum=-2.432;VQSLOD=0.6691;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:3,2:15:31.68:194,32,0	0/0:6,0:6:14.98:0,15,123	0/1:15,0:11:3.65:4,0,25	0/0:13,0:10:2.59:0,3,14	0/0:13,0:13:20.96:0,21,172	0/0:14,0:14:32.95:0,33,271	0/0:16,0:16:32.95:0,33,271	0/0:17,0:17:11.77:0,12,245	0/0:10,0:10:23.95:0,24,197	0/0:17,0:17:35.94:0,36,295	0/0:15,0:16:34.98:0,35,277	0/0:11,0:11:29.95:0,30,246	0/0:12,0:12:26.96:0,27,222	0/0:11,0:11:23.95:0,24,197	1/1:5,7:12:27.06:284,27,0	0/0:9,0:10:25.99:0,26,200	0/0:15,0:16:30.06:0,30,291	0/0:9,0:9:20.95:0,21,172	0/0:22,0:23:43.93:0,44,348	0/0:14,1:15:3.97:0,4,239	0/0:11,0:11:26.96:0,27,222	0/0:8,0:8:23.97:0,24,197	0/0:15,0:15:35.95:0,36,295	0/0:5,0:5:14.98:0,15,123	0/0:12,0:12:26.94:0,27,222	1/1:7,8:15:30.06:312,30,0	0/0:16,0:16:41.93:0,42,344	1/1:4,7:11:9.02:96,9,0
chr10	84245976	.	AT	A	579.99	PASS	AB=0.778;AC=6;AF=0.111;AN=54;BaseQRankSum=7.755;DP=315;FS=10.064;HRun=4;HaplotypeScore=43.6247;InbreedingCoeff=0.4020;MQ=65.29;MQ0=3;MQRankSum=-4.864;QD=10.36;ReadPosRankSum=-0.342;VQSLOD=0.0583;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,7:16:20.84:161,21,0	0/0:2,0:2:3.01:0,3,42	0/0:14,0:9:4.87:0,5,105	0/0:16,0:10:8.55:0,9,105	0/0:9,0:9:18.06:0,18,251	0/0:14,0:14:39.13:0,39,546	0/0:1,0:1:3.01:0,3,42	0/0:41,0:37:99:0,102,1410	0/0:9,0:9:21.07:0,21,293	0/0:8,0:6:12.04:0,12,167	0/0:10,0:6:12.04:0,12,166	0/0:3,0:3:9.03:0,9,126	0/0:7,0:7:21.07:0,21,292	0/0:8,0:8:24.08:0,24,335	0/1:8,8:16:99:240,0,249	0/0:4,0:4:9.03:0,9,125	0/0:28,0:28:72.24:0,72,1006	0/0:22,0:22:63.21:0,63,877	0/0:29,0:27:69.23:0,69,961	0/0:5,0:4:12.04:0,12,167	0/0:7,0:7:12.04:0,12,168	0/0:1,0:1:3.01:0,3,42	0/0:3,0:3:9.02:0,9,108	./.	0/0:6,0:5:9.03:0,9,116	0/1:7,1:8:59.18:59,0,186	0/0:10,0:9:21.07:0,21,292	1/1:7,9:12:21.06:251,21,0
chr10	84245989	.	A	AAT	392.04	PASS	AB=0.917;AC=6;AF=0.107;AN=56;BaseQRankSum=6.466;DP=322;FS=9.064;HRun=0;HaplotypeScore=39.3926;InbreedingCoeff=0.4274;MQ=53.09;MQ0=17;MQRankSum=-4.087;QD=6.53;ReadPosRankSum=0.344;VQSLOD=0.9139;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,3:16:16.85:194,17,0	0/0:4,0:1:3.01:0,3,49	0/0:11,0:2:4.53:0,5,15	0/1:14,0:9:1.71:2,0,98	0/0:11,0:9:18.06:0,18,293	0/0:15,0:15:42.11:0,42,650	0/0:5,0:3:3.01:0,3,49	0/0:37,0:29:87.28:0,87,1326	0/0:9,0:9:18.05:0,18,271	0/0:8,0:5:15.04:0,15,222	0/0:14,0:3:6.02:0,6,97	0/0:8,0:7:12.04:0,12,196	0/0:6,0:5:12.04:0,12,196	0/0:8,0:8:21.07:0,21,341	0/1:11,3:14:99:149,0,306	0/0:3,0:3:8.96:0,9,105	0/0:31,0:28:66.21:0,66,1035	0/0:23,0:22:54.18:0,54,876	0/0:21,0:19:54.18:0,54,872	0/0:6,0:5:9.03:0,9,146	0/0:11,0:7:12.03:0,12,171	0/0:2,0:2:6.02:0,6,87	0/0:4,0:3:6.02:0,6,97	0/0:2,0:2:0.47:0,0,1	0/0:5,0:4:5.95:0,6,67	0/0:7,0:6:18.06:0,18,293	0/0:11,0:10:21.05:0,21,311	1/1:9,4:9:12.04:169,12,0
chr10	84246132	.	GAGCCATCTCTCC	G	353.35	PASS	AB=0.692;AC=1;AF=0.018;AN=56;BaseQRankSum=1.757;DP=690;FS=5.199;HRun=0;HaplotypeScore=234.9629;InbreedingCoeff=-0.0214;MQ=43.87;MQ0=45;MQRankSum=-2.106;QD=39.26;ReadPosRankSum=0.297;VQSLOD=2.9679;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:51:78.26:0,78,4519	0/0:7,0:6:12.04:0,12,670	0/0:7,0:3:8.98:0,9,387	0/0:22,0:15:38.96:0,39,1666	0/0:21,0:21:42.14:0,42,2525	0/0:24,0:24:49.05:0,49,2600	0/0:28,0:23:45.15:0,45,2556	0/0:33,0:21:57.15:0,57,3099	0/0:19,0:17:45.15:0,45,2735	0/0:14,0:14:42.14:0,42,2427	0/0:24,0:22:57.20:0,57,3436	0/0:16,0:15:27.09:0,27,1565	0/0:18,0:18:47.91:0,48,2827	0/0:22,0:21:51.18:0,51,3007	0/0:27,0:25:60.21:0,60,3515	0/0:15,0:11:30.10:0,30,1829	0/0:45,0:41:93.32:0,93,5573	0/0:31,0:23:45.15:0,45,2557	0/0:28,0:20:54.10:0,54,2797	0/0:24,0:23:69.24:0,69,4128	0/0:36,0:31:73.13:0,73,4308	0/0:18,0:16:42.14:0,42,2243	0/0:22,0:21:60.20:0,60,3378	0/0:33,0:33:66.18:0,66,3440	0/1:5,4:7:99:428,0,346	0/0:36,0:32:93.28:0,93,4764	0/0:30,0:30:81.10:0,81,4916	0/0:26,0:23:60.21:0,60,3540
chr10	84246487	.	GGAGGAGGAGGAAGAGGAGGAGGAGGAA	G	3697.34	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=8.311;DP=529;FS=9.266;HRun=0;HaplotypeScore=324.8955;InbreedingCoeff=0.5619;MQ=57.24;MQ0=23;MQRankSum=-7.235;QD=44.02;ReadPosRankSum=2.000;VQSLOD=0.9075;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:75.08:75,0,169	0/0:10,0:9:18.06:0,18,1248	./.	0/0:22,0:9:17.95:0,18,441	0/0:28,0:27:66.22:0,66,5393	0/0:12,0:12:33.11:0,33,3007	0/1:19,0:19:33.79:34,0,3303	0/0:17,0:14:33.04:0,33,1233	0/0:23,0:22:66.23:0,66,5637	0/0:27,0:25:66.23:0,66,4649	0/0:15,0:15:42.14:0,42,3375	0/0:11,0:11:33.11:0,33,2217	0/0:21,0:21:51.18:0,51,3906	0/0:13,0:13:29.64:0,30,2190	1/1:7,5:12:26.29:1331,26,0	0/0:21,0:20:54.19:0,54,4881	0/0:34,0:33:99:0,99,7433	0/0:18,0:18:54.19:0,54,4080	0/0:17,0:14:36.08:0,36,1350	0/0:24,0:21:54.18:0,54,3669	0/0:22,0:21:60.21:0,60,4253	0/0:30,0:29:72.25:0,72,6092	0/0:26,0:24:69.23:0,69,4931	0/0:21,0:21:35.14:0,35,4739	0/1:14,0:12:99:160,0,518	1/1:2,17:18:36.74:1667,37,0	0/0:23,0:22:60.21:0,60,4473	1/1:3,2:3:6.02:430,6,0
chr10	84246545	.	GAGAAGA	G	519.57	PASS	AB=0.892;AC=5;AF=0.089;AN=56;BaseQRankSum=7.751;DP=612;FS=1.668;HRun=0;HaplotypeScore=173.5737;InbreedingCoeff=0.3304;MQ=55.75;MQ0=15;MQRankSum=-6.632;QD=9.28;ReadPosRankSum=0.557;VQSLOD=2.6770;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,7:14:26.90:440,27,0	0/0:18,0:18:44.92:0,45,1095	0/0:36,0:19:27.21:0,27,571	0/0:41,0:10:12.37:0,12,154	0/0:28,0:28:75.25:0,75,2170	0/0:26,0:26:72.72:0,73,2294	0/0:19,0:19:54.16:0,54,1347	0/0:22,0:19:43.20:0,43,786	0/0:23,0:23:66.17:0,66,1648	0/0:32,0:31:93.30:0,93,2769	0/0:19,0:19:57.19:0,57,1493	0/0:16,0:16:48.15:0,48,1391	0/0:18,0:18:54.14:0,54,1294	0/0:18,0:18:51.15:0,51,1651	0/1:15,0:15:18.38:18,0,111	0/0:14,0:14:36.11:0,36,939	0/0:33,0:33:72.15:0,72,1956	0/0:20,0:20:57.10:0,57,1493	0/0:9,0:8:21.07:0,21,634	0/0:34,0:34:79.51:0,80,2571	0/0:12,0:12:12.24:0,12,895	0/0:30,0:30:75.23:0,75,2104	0/0:24,0:24:68.38:0,68,1639	0/0:27,0:27:73.08:0,73,1999	0/0:17,0:17:43.69:0,44,1207	0/1:18,0:19:99:162,0,124	0/0:19,0:19:38.60:0,39,1333	0/1:5,0:8:22.63:23,0,58
chr10	84246557	.	GAGAAGAAGAAGGAGA	G	1100.80	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=8.639;DP=629;FS=8.715;HRun=0;HaplotypeScore=287.9979;InbreedingCoeff=0.2537;MQ=54.86;MQ0=19;MQRankSum=-7.005;QD=15.29;ReadPosRankSum=-1.502;VQSLOD=0.5610;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:17.59:18,0,516	0/0:16,0:16:39.13:0,39,2110	0/0:41,0:17:47.61:0,48,1101	0/0:45,0:12:20.14:0,20,473	0/0:26,0:26:69.18:0,69,3687	0/0:25,0:25:75.24:0,75,4435	0/0:17,0:17:48.12:0,48,2176	0/0:23,0:20:57.12:0,57,1409	0/0:22,0:22:66.21:0,66,3189	0/0:35,0:34:96.33:0,96,5412	0/0:19,0:19:57.18:0,57,2744	0/0:17,0:17:51.18:0,51,2920	0/0:15,0:15:45.15:0,45,2397	0/0:18,0:18:54.19:0,54,3297	1/1:10,4:17:37.39:997,37,0	0/0:14,0:14:33.06:0,33,1419	0/0:30,0:30:72.23:0,72,3403	0/0:17,0:17:51.15:0,51,2718	0/0:11,0:10:29.89:0,30,1272	0/0:39,0:39:46.34:0,46,4647	0/1:11,0:11:55.27:55,0,1431	0/0:29,0:29:72.22:0,72,3665	0/0:22,0:22:63.22:0,63,3139	0/0:32,0:32:17.12:0,17,4081	0/0:18,0:18:46.97:0,47,2421	0/1:18,0:18:99:144,0,329	0/0:25,0:24:57.61:0,58,2651	0/1:10,0:10:17.28:17,0,178
chr10	84246583	.	G	GAGAA	3654.83	PASS	AB=0.953;AC=21;AF=0.375;AN=56;BaseQRankSum=-1.390;DP=649;FS=1.540;HRun=0;HaplotypeScore=150.9112;InbreedingCoeff=0.2950;MQ=50.14;MQ0=17;MQRankSum=1.315;QD=10.53;ReadPosRankSum=-1.927;VQSLOD=2.4688;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:10.21:0,10,69	1/1:6,9:15:15.01:252,15,0	0/0:51,0:12:5.93:0,6,61	0/1:50,0:7:0:0,0,0	0/0:23,0:23:32.92:0,33,469	0/0:24,0:24:42.03:0,42,550	1/1:22,0:20:23.41:199,23,0	0/1:26,0:25:37.56:60,0,38	0/1:23,1:25:11.89:12,0,778	1/1:10,19:30:60.13:1138,60,0	1/1:8,11:21:32.80:564,33,0	0/0:24,0:24:45.14:0,45,693	0/0:16,0:16:36.07:0,36,490	0/0:19,0:19:30.06:0,30,404	0/0:6,0:12:24.25:0,24,204	1/1:6,10:18:3.48:73,3,0	0/1:13,10:24:32.97:268,0,33	0/1:16,0:16:6.66:7,0,347	0/1:13,0:12:11.22:164,0,11	0/1:36,0:36:97.73:589,0,98	1/1:9,0:9:3.01:50,3,0	0/0:31,0:31:51.14:0,51,746	0/0:26,0:26:63.13:0,63,871	0/0:31,0:31:20.15:0,20,795	0/0:20,0:20:6.95:0,7,243	0/1:13,1:14:53.19:53,0,130	0/1:28,0:27:99:226,0,211	0/0:9,0:8:19.52:0,20,124
chr10	84246585	.	GAAAGAA	G	615.63	PASS	AB=0.917;AC=4;AF=0.071;AN=56;BaseQRankSum=7.897;DP=650;FS=2.903;HRun=0;HaplotypeScore=178.7099;InbreedingCoeff=0.1377;MQ=50.13;MQ0=16;MQRankSum=-6.370;QD=11.84;ReadPosRankSum=3.226;VQSLOD=2.8492;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:44.51:45,0,197	0/0:15,0:15:36.11:0,36,684	0/0:51,0:12:22.37:0,22,300	0/0:49,0:7:12.50:0,13,181	0/0:23,0:23:63.17:0,63,1618	0/0:24,0:24:72.21:0,72,1788	0/0:23,0:21:51.15:0,51,1077	0/0:27,0:26:77.47:0,77,1326	0/0:24,0:24:71.72:0,72,2145	0/0:32,0:32:90.31:0,90,2329	0/0:21,0:21:54.18:0,54,1240	0/0:24,0:24:72.24:0,72,2088	0/0:16,0:16:47.65:0,48,1346	0/0:18,0:18:54.16:0,54,1391	0/1:6,6:12:46.35:225,0,46	0/0:17,0:17:19.87:0,20,324	0/0:24,0:24:45.14:0,45,859	0/0:16,0:16:48.16:0,48,1295	0/0:14,0:13:36.08:0,36,648	0/0:35,0:35:99:0,102,2173	0/0:6,0:6:18.02:0,18,295	0/0:31,0:31:84.28:0,84,2317	0/0:27,0:27:81.27:0,81,2453	0/0:32,0:32:92.53:0,93,2544	0/0:19,0:19:51.13:0,51,1434	0/1:15,0:15:99:219,0,221	0/0:30,0:29:87.29:0,87,2249	0/1:9,0:8:0.45:237,0,0
chr10	84246589	.	GAAA	G	630.09	PASS	AB=0.845;AC=5;AF=0.089;AN=56;BaseQRankSum=9.579;DP=639;FS=6.477;HRun=3;HaplotypeScore=145.0586;InbreedingCoeff=0.3306;MQ=50.69;MQ0=15;MQRankSum=-8.162;QD=12.60;ReadPosRankSum=3.197;VQSLOD=0.3019;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,2:15:10.35:167,0,10	0/0:15,0:15:36.04:0,36,541	0/0:42,0:8:4.96:0,5,210	0/0:42,0:7:9.03:0,9,134	0/0:21,0:21:54.18:0,54,1098	0/0:23,0:23:69.22:0,69,1366	0/0:23,0:21:51.11:0,51,948	0/0:30,0:28:84.25:0,84,1317	0/0:24,0:24:62.12:0,62,1504	0/0:36,0:36:99:0,108,1957	0/0:21,0:21:54.18:0,54,986	0/0:26,0:26:78.26:0,78,1630	0/0:16,0:16:38.07:0,38,965	0/0:16,0:16:48.09:0,48,955	0/1:11,0:11:35.42:35,0,44	0/0:17,0:17:19.88:0,20,303	0/0:23,0:23:45.10:0,45,648	0/0:17,0:17:51.17:0,51,1001	0/0:14,0:13:36.08:0,36,552	0/0:35,0:35:99:0,99,1885	0/0:6,0:6:17.99:0,18,289	0/0:32,0:32:87.29:0,87,1794	0/0:27,0:27:81.24:0,81,1772	0/0:33,0:33:88.18:0,88,1888	0/0:18,0:18:48.11:0,48,988	0/1:7,8:15:80.64:282,0,81	0/0:31,0:30:93.20:0,93,1846	1/1:2,7:8:24.04:268,24,0
chr10	84246593	.	GAAAGAAAGAAAGAAAGA	G	2501.89	PASS	AB=0.767;AC=6;AF=0.107;AN=56;BaseQRankSum=10.603;DP=636;FS=5.891;HRun=0;HaplotypeScore=294.6297;InbreedingCoeff=0.5687;MQ=50.85;MQ0=16;MQRankSum=-9.601;QD=46.33;ReadPosRankSum=1.038;VQSLOD=2.2458;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:15:56.14:109,0,56	0/0:14,0:14:30.09:0,30,1063	0/0:39,0:6:3.22:0,3,134	0/0:37,0:5:8.70:0,9,134	0/0:21,0:21:57.67:0,58,2610	0/0:20,0:20:57.17:0,57,2670	0/0:23,0:21:51.16:0,51,2120	0/0:30,0:28:81.26:0,81,2358	0/0:23,0:23:69.22:0,69,4106	0/0:36,0:36:99:0,105,4791	0/0:22,0:22:54.17:0,54,2326	0/0:27,0:27:78.23:0,78,4122	0/0:20,0:20:57.20:0,57,2748	0/0:14,0:14:42.11:0,42,1873	1/1:15,0:15:38.72:519,39,0	0/0:20,0:20:30.05:0,30,1025	0/0:20,0:20:36.12:0,36,1618	0/0:16,0:16:45.08:0,45,2058	0/0:15,0:14:42.14:0,42,1718	0/0:33,0:33:93.29:0,93,4109	0/0:6,0:6:18.06:0,18,736	0/0:31,0:31:84.29:0,84,4521	0/0:28,0:28:78.27:0,78,4681	0/0:35,0:35:96.78:0,97,4829	0/0:20,0:20:54.19:0,54,3025	0/1:7,7:15:99:1084,0,370	0/0:31,0:30:90.31:0,90,4911	1/1:2,7:8:24.08:926,24,0
chr10	84246769	.	CACAA	C	3514.64	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.799;DP=670;FS=21.062;HRun=0;HaplotypeScore=105.7219;InbreedingCoeff=0.8708;MQ=72.40;MQ0=1;MQRankSum=-3.990;QD=35.15;ReadPosRankSum=2.895;VQSLOD=2.2444;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,35:40:60.24:1230,60,0	0/0:12,0:12:33.11:0,33,797	0/0:22,0:19:33.11:0,33,761	0/0:28,0:26:57.19:0,57,1307	0/0:20,0:20:54.17:0,54,1210	0/0:24,0:24:66.23:0,66,1636	0/0:28,0:28:69.23:0,69,1636	0/0:30,0:30:60.19:0,60,1410	0/0:24,0:24:60.20:0,60,1446	0/0:29,0:29:78.25:0,78,1795	0/0:11,0:11:24.08:0,24,559	0/0:22,0:22:51.18:0,51,1274	0/0:28,0:28:72.24:0,72,1677	0/0:20,0:20:54.19:0,54,1329	1/1:4,21:25:54.18:921,54,0	0/0:17,0:17:48.16:0,48,1154	0/0:33,0:33:81.24:0,81,1867	0/0:18,1:19:0.02:0,0,1150	0/0:19,0:19:39.13:0,39,953	0/0:21,0:21:48.15:0,48,1088	0/0:26,0:26:66.23:0,66,1653	0/0:24,0:24:63.20:0,63,1483	0/0:24,0:24:57.20:0,57,1382	0/0:48,0:48:99:0,120,2761	0/0:11,0:11:33.11:0,33,827	1/1:4,25:29:3.02:1160,3,0	0/0:30,0:30:78.27:0,78,1909	1/1:0,5:5:12.04:205,12,0
chr10	84247348	.	G	GC	5568.12	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-14.394;DP=632;FS=8.137;HRun=1;HaplotypeScore=57.0366;InbreedingCoeff=0.9925;MQ=83.28;MQ0=0;MQRankSum=-3.057;QD=40.06;ReadPosRankSum=0.326;VQSLOD=5.0604;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,52:53:99:2289,154,0	0/0:9,0:9:27.07:0,27,335	0/0:15,0:15:42.07:0,42,492	0/0:20,0:20:49.86:0,50,597	0/0:22,0:22:60.19:0,60,777	0/0:25,0:25:75.23:0,75,958	0/0:21,0:21:63.20:0,63,818	0/0:25,0:25:69.21:0,69,872	0/0:18,0:18:51.15:0,51,648	0/0:30,0:30:90.28:0,90,1151	0/0:23,0:23:69.22:0,69,894	0/0:18,0:18:54.15:0,54,671	0/0:18,0:18:48.13:0,48,593	0/0:14,0:14:42.14:0,42,545	1/1:1,29:30:78.26:1168,78,0	0/0:22,0:22:63.17:0,63,799	0/0:30,0:30:84.27:0,84,1090	0/0:33,0:33:96.27:0,96,1215	0/0:16,0:16:45.15:0,45,584	0/0:27,0:27:78.20:0,78,991	0/0:22,0:22:57.18:0,57,740	0/0:16,0:16:45.15:0,45,582	0/0:20,0:20:60.20:0,60,779	0/0:25,0:25:75.23:0,75,958	1/1:0,16:16:36.12:539,36,0	1/1:0,33:33:96.29:1391,96,0	0/0:24,0:24:72.23:0,72,934	1/1:0,7:7:12.04:180,12,0
chr10	84250954	.	CAT	C	1076.01	PASS	AB=0.950;AC=9;AF=0.161;AN=56;BaseQRankSum=5.635;DP=685;FS=9.666;HRun=0;HaplotypeScore=95.1924;InbreedingCoeff=0.8249;MQ=56.71;MQ0=11;MQRankSum=-0.854;QD=12.37;ReadPosRankSum=0.671;VQSLOD=2.9849;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:25:8.72:218,9,0	0/0:12,0:12:24.35:0,24,451	0/0:39,0:22:60.07:0,60,665	0/0:43,0:22:63.09:0,63,717	0/0:31,0:31:57.71:0,58,989	0/0:21,0:20:60.04:0,60,785	0/0:24,1:25:52.67:0,53,956	0/0:31,1:32:9.23:0,9,843	0/0:20,0:20:35.79:0,36,783	0/0:22,0:21:11.17:0,11,565	0/0:16,1:16:32.34:0,32,535	0/0:25,0:25:54.86:0,55,1073	0/0:17,0:17:36.19:0,36,731	0/0:18,0:18:50.77:0,51,791	0/1:5,1:19:62.16:62,0,74	0/0:19,0:19:50.17:0,50,752	0/0:26,0:26:34.64:0,35,1105	0/0:38,0:38:55.74:0,56,1482	0/0:18,0:18:31.90:0,32,459	0/0:24,0:24:58.33:0,58,1042	0/0:45,0:45:72.27:0,72,1502	0/0:19,0:20:49.01:0,49,848	0/0:22,0:23:18.36:0,18,735	0/0:33,0:32:75.95:0,76,1193	1/1:12,0:16:20.42:157,20,0	1/1:12,3:16:24.53:389,25,0	0/0:29,0:29:87.07:0,87,1386	1/1:0,9:10:27.09:410,27,0
chr10	84250955	.	ATG	A	471.75	PASS	AB=0.914;AC=15;AF=0.268;AN=56;BaseQRankSum=6.080;DP=694;FS=1.223;HRun=0;HaplotypeScore=97.6007;InbreedingCoeff=-0.1792;MQ=56.40;MQ0=12;MQRankSum=1.402;QD=1.50;ReadPosRankSum=0.641;VQSLOD=1.6090;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:9.96:0,10,96	0/1:11,1:12:13.12:13,0,243	0/0:39,0:22:5.75:0,6,58	0/0:45,0:22:12.03:0,12,162	0/1:29,3:32:20.22:20,0,584	0/0:21,0:20:33.11:0,33,494	0/0:23,1:25:7.92:0,8,546	0/1:30,1:32:51.50:52,0,273	0/1:17,2:20:23.24:23,0,529	0/1:20,2:21:54.98:55,0,274	0/1:13,1:15:10.12:10,0,268	0/1:25,0:25:13.82:14,0,683	0/1:15,1:17:6.51:7,0,443	0/0:19,0:19:27.09:0,27,477	0/0:19,0:19:11.57:0,12,319	0/0:19,0:20:19.03:0,19,447	0/1:21,4:25:7.71:8,0,763	0/0:37,1:38:38.04:0,38,1018	0/1:17,2:19:49.47:49,0,145	0/0:23,1:24:13.77:0,14,607	0/1:42,4:46:21.32:21,0,981	0/0:21,0:21:44.61:0,45,614	0/1:18,4:23:51.51:52,0,434	0/0:31,3:33:19.81:0,20,696	0/0:16,0:16:0.89:0,1,2	0/1:14,0:15:9.16:89,0,9	0/0:28,0:28:60.20:0,60,914	1/1:11,0:11:8.90:214,9,0
chr10	84251654	.	TC	T	1583.85	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.759;DP=604;FS=4.355;HRun=2;HaplotypeScore=89.6089;InbreedingCoeff=0.9495;MQ=82.07;MQ0=8;MQRankSum=-4.099;QD=20.31;ReadPosRankSum=-1.967;VQSLOD=3.1099;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,11:29:68.56:573,69,0	0/0:14,0:13:3.98:0,4,461	0/0:56,0:34:70.22:0,70,1046	0/0:78,0:38:66.10:0,66,854	0/0:23,0:23:60.20:0,60,894	0/0:10,0:10:30.07:0,30,408	0/0:20,0:20:24.25:0,24,758	0/0:30,0:30:72.07:0,72,1000	0/0:14,0:14:42.14:0,42,625	0/0:24,0:24:54.22:0,54,821	0/0:10,0:10:27.09:0,27,404	0/0:15,0:14:42.14:0,42,628	0/0:19,0:19:48.63:0,49,718	0/0:14,0:14:39.13:0,39,583	1/1:8,10:18:53.89:480,54,0	0/0:15,0:14:16.71:0,17,473	0/0:25,0:23:66.19:0,66,959	0/0:14,0:14:39.12:0,39,559	0/0:19,0:19:36.20:0,36,704	0/0:12,0:12:33.07:0,33,494	0/0:46,0:45:89.62:0,90,1534	0/0:15,0:15:42.13:0,42,609	0/0:16,0:16:48.15:0,48,690	0/0:31,0:31:75.21:0,75,1068	1/1:4,3:7:11.90:98,12,0	1/1:9,7:16:43.21:423,43,0	0/0:6,0:6:13.73:0,14,218	1/1:6,1:7:20.81:182,21,0
chr10	84251658	.	TC	T	1134.20	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=9.820;DP=626;FS=0.508;HRun=2;HaplotypeScore=103.0423;InbreedingCoeff=0.7959;MQ=75.91;MQ0=12;MQRankSum=-0.809;QD=10.80;ReadPosRankSum=-0.854;VQSLOD=1.3999;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,9:34:47.93:406,48,0	0/0:14,0:13:1.31:0,1,388	0/0:53,1:32:71.84:0,72,897	0/0:72,0:32:54.81:0,55,635	0/0:25,0:24:57.14:0,57,741	0/0:9,0:9:24.08:0,24,321	0/1:25,0:25:13.44:13,0,593	0/0:25,0:25:62.59:0,63,796	0/0:17,0:17:43.54:0,44,542	0/0:24,0:24:41.16:0,41,675	0/0:13,0:13:27.09:0,27,361	0/0:22,0:21:42.24:0,42,465	0/0:19,0:19:45.21:0,45,572	0/0:17,0:17:41.85:0,42,527	1/1:13,4:17:36.53:292,37,0	0/0:16,0:15:14.62:0,15,381	0/0:26,0:24:57.52:0,58,731	0/0:19,0:17:43.50:0,44,486	0/0:20,0:19:35.93:0,36,633	0/0:15,0:15:11.37:0,11,416	0/0:48,0:48:70.24:0,70,1125	0/0:14,0:14:36.12:0,36,481	0/0:16,0:16:32.93:0,33,403	0/0:29,0:29:63.89:0,64,775	1/1:3,2:5:6.01:60,6,0	1/1:10,7:17:45.51:415,46,0	0/0:7,0:7:11.93:0,12,196	1/1:6,0:6:10.32:117,10,0
chr10	84251659	.	CCT	C	245.77	PASS	AB=0.953;AC=13;AF=0.271;AN=48;BaseQRankSum=1.431;DP=670;FS=59.106;HRun=0;HaplotypeScore=112.0674;InbreedingCoeff=0.3426;MQ=72.97;MQ0=13;MQRankSum=-0.638;QD=0.93;ReadPosRankSum=3.647;VQSLOD=-0.4136;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:38:14.57:0,15,126	0/0:17,0:16:6.32:0,6,47	0/1:53,0:31:0:0,0,0	0/1:72,0:32:0:0,0,0	./.	./.	0/0:27,0:27:11.23:0,11,78	0/0:27,0:27:3.01:0,3,33	0/1:16,1:17:22.95:23,0,76	0/0:27,0:27:25.69:0,26,242	./.	0/1:20,2:21:74.29:74,0,143	1/1:17,2:19:3:32,3,0	0/0:20,0:20:8.91:0,9,109	1/1:17,0:18:16.14:78,16,0	0/0:21,0:18:10.22:0,10,73	0/0:24,0:24:0:0,0,0	1/1:18,1:17:8.85:78,9,0	0/0:25,0:24:8.96:0,9,76	0/0:18,0:18:5.95:0,6,52	0/0:51,0:50:2.98:0,3,22	./.	1/1:15,0:15:5.71:29,6,0	0/1:26,2:29:65.81:66,0,110	0/0:6,0:7:0:0,0,0	0/0:18,0:18:5.85:0,6,52	0/0:9,0:9:5.98:0,6,54	0/0:9,0:10:7.98:0,8,53
chr10	84252213	.	CT	C	3104.18	PASS	AB=0.655;AC=35;AF=0.625;AN=56;BaseQRankSum=-6.573;DP=450;FS=8.679;HRun=14;HaplotypeScore=57.5670;InbreedingCoeff=0.4415;MQ=56.75;MQ0=3;MQRankSum=3.971;QD=8.60;ReadPosRankSum=3.023;VQSLOD=2.3262;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:26.71:0,27,158	1/1:3,1:5:4.96:26,5,0	0/0:3,0:3:3:0,3,26	0/0:12,0:9:3:0,3,28	0/1:6,10:16:0.20:106,0,0	1/1:5,6:12:18.93:114,19,0	1/1:4,12:18:30.81:195,31,0	1/1:16,14:32:42.50:279,42,0	1/1:8,8:19:7.42:142,7,0	1/1:13,8:22:16.36:153,16,0	0/1:4,6:12:2.77:110,0,3	0/1:6,6:13:10.94:71,0,11	0/1:8,8:16:7.05:102,0,7	1/1:2,9:10:17.85:123,18,0	0/0:7,0:5:6.39:0,6,40	0/1:6,8:15:0.02:128,0,0	1/1:13,15:27:44.53:307,45,0	1/1:6,9:15:3.58:124,4,0	1/1:10,13:23:36.08:230,36,0	1/1:7,13:20:37.63:247,38,0	1/1:3,14:17:36.80:238,37,0	0/1:16,0:19:8.62:9,0,102	1/1:4,14:18:38.66:267,39,0	0/1:1,7:8:3.99:120,0,4	0/0:17,0:14:8.71:0,9,101	0/0:20,0:17:16.93:0,17,99	1/1:7,9:16:26.73:185,27,0	0/0:10,0:8:5.81:0,6,35
chr10	84252214	.	T	TTTC	705.41	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=-1.431;DP=454;FS=3.054;HRun=0;HaplotypeScore=83.4819;InbreedingCoeff=-0.1493;MQ=56.36;MQ0=3;MQRankSum=-7.249;QD=3.54;ReadPosRankSum=-5.749;VQSLOD=0.1085;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:38.54:0,39,257	0/0:5,0:5:15.01:0,15,140	0/0:3,0:3:6.01:0,6,57	0/1:12,0:9:1.89:2,0,40	0/0:16,0:16:12.38:0,12,245	0/1:13,0:12:17.91:18,0,168	0/1:20,0:19:10.18:10,0,200	0/0:32,0:32:30.69:0,31,693	0/0:19,0:19:38.10:0,38,382	0/0:23,0:23:14.38:0,14,420	0/0:12,0:12:9.49:0,9,269	0/1:12,0:12:17.09:17,0,173	0/1:16,0:16:40.78:41,0,113	0/1:11,0:10:20.12:20,0,119	0/0:7,0:5:9.40:0,9,65	0/0:17,0:16:45.06:0,45,451	0/0:28,0:27:47.49:0,47,579	0/1:15,0:15:75.79:76,0,79	0/1:24,0:22:99:110,0,215	0/1:20,0:20:59.92:60,0,201	0/0:19,0:17:42.04:0,42,403	1/1:7,12:20:11.94:462,12,0	0/1:19,0:19:13.62:14,0,315	0/1:8,0:8:16.81:17,0,162	0/0:17,0:14:14.85:0,15,161	0/0:20,0:17:29.94:0,30,219	0/0:17,0:17:24.44:0,24,363	0/1:9,0:7:13.86:14,0,62
chr10	84252957	.	TG	T	2068.37	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.348;DP=539;FS=10.615;HRun=2;HaplotypeScore=62.3531;InbreedingCoeff=0.9479;MQ=78.80;MQ0=0;MQRankSum=-1.602;QD=22.73;ReadPosRankSum=3.044;VQSLOD=2.4867;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:31:64.81:750,65,0	0/0:12,0:12:36.12:0,36,539	0/0:18,0:17:45.02:0,45,598	0/0:23,0:23:44.34:0,44,798	0/0:13,0:13:39.12:0,39,557	0/0:12,0:12:33.11:0,33,485	0/0:29,0:29:84.28:0,84,1245	0/0:30,0:30:84.20:0,84,1157	0/0:17,0:17:48.16:0,48,714	0/0:18,0:18:54.14:0,54,765	0/0:1,0:1:3.01:0,3,45	0/0:28,0:28:84.26:0,84,1214	0/0:18,0:18:54.18:0,54,807	0/0:13,0:13:39.12:0,39,563	1/1:3,11:14:23.67:266,24,0	0/0:17,0:17:51.16:0,51,742	0/0:34,0:34:99:0,99,1451	0/0:24,0:24:66.22:0,66,987	0/0:9,0:9:27.08:0,27,387	0/0:15,0:15:45.15:0,45,670	0/0:36,0:36:99:0,99,1457	0/0:14,0:14:42.14:0,42,629	0/0:17,0:17:51.17:0,51,750	0/0:28,0:28:78.22:0,78,1140	1/1:1,15:16:9.98:399,10,0	1/1:0,21:21:60.07:581,60,0	0/0:22,0:21:66.22:0,66,985	1/1:0,9:9:24.05:244,24,0
chr10	84254144	.	AGGGG	A	2370.35	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=5.849;DP=338;FS=1.237;HRun=11;HaplotypeScore=64.8594;InbreedingCoeff=0.8057;MQ=65.02;MQ0=3;MQRankSum=-4.187;QD=32.47;ReadPosRankSum=1.642;VQSLOD=2.2266;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:18:24.05:356,24,0	0/0:5,0:5:4.50:0,4,133	0/0:15,0:8:15.03:0,15,199	0/0:12,0:7:5.53:0,6,142	0/0:9,0:9:11.58:0,12,250	0/0:12,0:13:21.03:0,21,390	0/0:10,0:14:33.11:0,33,625	0/0:6,0:6:3.01:0,3,75	0/0:14,0:15:42.14:0,42,941	0/0:11,0:14:15.05:0,15,275	./.	0/0:11,0:12:24.08:0,24,526	0/0:15,0:15:39.11:0,39,746	0/0:14,0:14:30.10:0,30,625	1/1:1,15:15:45.08:643,45,0	0/0:1,0:4:9.03:0,9,153	0/0:8,0:33:45.15:0,45,840	0/0:13,0:15:30.02:0,30,651	0/0:11,0:11:10.55:0,11,159	0/0:8,0:7:12.03:0,12,196	0/0:11,0:11:8.98:0,9,190	0/0:11,0:11:12.04:0,12,217	0/0:6,0:6:6.02:0,6,118	0/0:4,0:4:6.02:0,6,126	1/1:4,10:14:33.06:480,33,0	1/1:2,15:17:48.15:722,48,0	0/0:9,0:11:24.08:0,24,466	1/1:0,8:8:24.04:338,24,0
chr10	84254218	.	G	GGA	761.45	PASS	AB=0.821;AC=8;AF=0.143;AN=56;BaseQRankSum=6.322;DP=315;FS=39.468;HRun=0;HaplotypeScore=92.2984;InbreedingCoeff=0.5813;MQ=55.71;MQ0=5;MQRankSum=-7.153;QD=13.13;ReadPosRankSum=-2.469;VQSLOD=1.0245;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,3:8:17:190,17,0	0/0:2,0:2:5.99:0,6,69	0/0:13,0:6:17.54:0,18,214	0/0:10,0:3:6.01:0,6,68	0/0:13,0:13:33.09:0,33,490	0/0:11,0:11:21.05:0,21,317	0/0:11,0:11:24.01:0,24,408	0/0:10,0:6:18.04:0,18,228	0/0:14,0:13:30.08:0,30,436	0/0:16,0:14:39.12:0,39,586	0/0:9,0:8:18.05:0,18,252	0/0:11,0:10:8.81:0,9,156	0/1:10,0:10:4.17:4,0,95	0/0:13,0:12:10.97:0,11,188	1/1:6,6:12:23.64:314,24,0	0/0:9,0:9:21.05:0,21,313	0/0:22,0:21:21.51:0,22,291	0/0:15,0:13:20.77:0,21,311	0/0:13,0:13:0.11:0,0,347	0/0:5,0:5:15.03:0,15,195	0/0:8,0:6:11.94:0,12,119	0/0:11,0:11:11.74:0,12,175	0/0:7,0:7:8.98:0,9,121	0/0:8,0:7:17.86:0,18,288	1/1:4,6:10:21.53:386,22,0	0/0:9,0:12:1.84:0,2,43	0/0:12,0:12:9.82:0,10,209	0/1:8,0:16:4.38:12,0,4
chr10	84254842	.	AAC	A	188.06	PASS	AB=0.966;AC=15;AF=0.300;AN=50;BaseQRankSum=3.406;DP=557;FS=0.000;HRun=0;HaplotypeScore=70.9551;InbreedingCoeff=0.2946;MQ=61.82;MQ0=22;MQRankSum=0.837;QD=0.79;ReadPosRankSum=0.036;VQSLOD=1.0814;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:0:0,0,0	0/0:7,0:9:9.01:0,9,94	./.	./.	0/0:9,0:9:6.02:0,6,79	0/0:18,0:18:8.15:0,8,117	1/1:20,2:21:11.78:102,12,0	0/0:15,0:14:0.89:0,1,2	0/0:6,0:6:2.99:0,3,24	0/0:19,0:19:14.99:0,15,159	0/0:8,0:8:5.95:0,6,83	0/1:22,0:22:25.53:26,0,30	0/1:15,0:15:4.64:5,0,57	./.	1/1:11,0:12:8.55:46,9,0	0/0:16,0:17:17.96:0,18,188	0/0:32,0:35:38.68:0,39,475	0/1:24,4:28:12.30:12,0,130	0/0:12,0:12:0:0,0,0	1/1:9,2:11:3:32,3,0	0/1:50,0:49:27.09:27,0,52	0/0:16,0:15:6.02:0,6,87	0/0:13,0:13:8.98:0,9,79	0/1:32,0:35:2.10:2,0,102	1/1:15,2:17:3.01:32,3,0	0/0:21,0:20:10.20:0,10,43	1/1:19,1:21:5.42:46,5,0	0/0:5,0:5:3.81:0,4,18
chr10	84256811	.	G	GT	1537.91	PASS	AB=0.985;AC=5;AF=0.089;AN=56;BaseQRankSum=-6.169;DP=705;FS=16.493;HRun=8;HaplotypeScore=73.3170;InbreedingCoeff=0.7729;MQ=74.09;MQ0=5;MQRankSum=-1.292;QD=12.11;ReadPosRankSum=0.251;VQSLOD=1.3327;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,26:31:69.20:795,69,0	0/0:10,0:10:30.02:0,30,274	0/0:51,0:33:14.35:0,14,304	0/1:63,1:37:34.78:35,0,203	0/0:29,0:29:77.92:0,78,683	0/0:14,0:14:33.02:0,33,302	0/0:16,0:16:40.90:0,41,378	0/0:41,0:41:99:0,105,946	0/0:25,0:25:68.96:0,69,610	0/0:26,0:26:60:0,60,541	0/0:29,0:29:78.03:0,78,709	0/0:25,0:25:65.99:0,66,591	0/0:12,0:12:33.02:0,33,302	0/0:10,0:10:27:0,27,242	0/0:25,0:25:60.01:0,60,545	0/0:13,0:13:33:0,33,302	0/0:34,0:34:93.04:0,93,850	0/0:31,0:31:74.97:0,75,670	0/0:29,0:29:43.45:0,43,521	0/0:24,0:24:72.04:0,72,659	0/0:12,0:12:30.01:0,30,274	0/0:21,0:21:56.99:0,57,509	0/0:22,0:22:57.03:0,57,520	0/0:13,0:13:38.97:0,39,348	1/1:1,30:31:50.77:838,51,0	0/0:30,0:30:68.99:0,69,625	0/0:21,0:21:57.03:0,57,521	0/0:12,0:12:30:0,30,274
chr10	84258008	.	CATTT	C	1919.06	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.660;DP=332;FS=5.687;HRun=0;HaplotypeScore=58.1003;InbreedingCoeff=0.9350;MQ=69.88;MQ0=0;MQRankSum=-5.494;QD=34.89;ReadPosRankSum=2.341;VQSLOD=3.2033;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:45.15:757,45,0	0/0:8,0:8:15.02:0,15,326	0/0:8,0:8:12.04:0,12,274	0/0:8,0:8:12.04:0,12,225	0/0:10,0:10:21.07:0,21,486	0/0:19,0:19:51.18:0,51,1263	0/0:22,0:22:60.19:0,60,1426	0/0:19,0:19:51.15:0,51,1158	0/0:17,0:17:45.15:0,45,1149	0/0:10,0:10:30.10:0,30,766	0/0:6,0:6:15.05:0,15,382	0/0:8,0:8:18.03:0,18,385	0/0:7,0:7:15.03:0,15,321	0/0:12,0:12:33.11:0,33,813	1/1:3,7:10:18.06:315,18,0	0/0:8,0:8:18.06:0,18,430	0/0:13,0:13:39.13:0,39,976	0/0:15,0:15:42.12:0,42,977	0/0:12,0:12:30.10:0,30,714	0/0:6,0:6:12.04:0,12,306	0/0:22,0:22:57.20:0,57,1370	0/0:5,0:5:15.05:0,15,383	0/0:8,0:8:18.02:0,18,400	0/0:13,0:13:33.11:0,33,797	1/1:3,5:8:12.04:207,12,0	1/1:2,13:15:39.11:650,39,0	0/0:21,0:20:42.13:0,42,969	1/1:1,4:5:9.03:158,9,0
chr10	84258071	.	CTCTCTCTCT	C	712.16	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.388;DP=252;FS=0.000;HRun=0;HaplotypeScore=84.7031;InbreedingCoeff=0.7128;MQ=92.12;MQ0=5;MQRankSum=-3.882;QD=47.48;ReadPosRankSum=-0.167;VQSLOD=2.9996;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,1:2:2.88:15,3,0	0/0:1,0:1:3.01:0,3,104	0/0:28,0:23:43.70:0,44,819	0/0:25,0:17:33.60:0,34,802	0/0:5,0:5:15.05:0,15,641	0/0:6,0:6:18.05:0,18,684	0/0:19,0:18:45.15:0,45,1986	0/0:16,0:16:48.16:0,48,1891	0/0:6,0:6:18.06:0,18,804	0/0:9,0:9:20.90:0,21,776	0/0:6,0:6:18.05:0,18,615	0/0:5,0:5:12.93:0,13,403	0/0:6,0:6:12.02:0,12,493	0/0:6,0:6:18.06:0,18,804	1/1:0,1:2:3.48:67,3,0	0/0:2,0:2:6.02:0,6,294	0/0:6,0:6:18.04:0,18,582	0/0:10,0:10:30.10:0,30,1143	0/0:12,0:12:36.12:0,36,1618	0/0:10,0:10:24.08:0,24,1020	0/0:30,0:29:72.17:0,72,2986	0/0:3,0:3:9.02:0,9,319	0/0:4,0:4:12.04:0,12,460	0/0:5,0:5:15.05:0,15,550	0/0:1,3:4:0.83:0,1,2	1/1:3,6:8:20.43:567,20,0	0/0:13,0:13:30.10:0,30,1095	1/1:0,2:2:6.02:194,6,0
chr10	84258089	.	AC	A	2088.35	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=1.111;DP=240;FS=4.001;HRun=8;HaplotypeScore=45.3988;InbreedingCoeff=0.6872;MQ=85.12;MQ0=4;MQRankSum=0.272;QD=15.24;ReadPosRankSum=4.923;VQSLOD=3.2992;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:5:4.34:4,0,10	0/0:1,0:1:0:0,0,0	0/1:21,0:17:7.37:7,0,91	0/0:25,0:17:18.51:0,19,234	0/0:4,0:4:9.03:0,9,107	0/0:8,0:8:18.05:0,18,210	1/1:3,22:25:47.89:488,48,0	1/1:4,8:12:8.79:219,9,0	0/0:7,0:7:18.03:0,18,199	0/0:9,0:9:17.77:0,18,176	0/0:2,0:2:6.02:0,6,75	0/0:6,0:6:12.03:0,12,140	0/0:5,0:5:11.98:0,12,121	0/0:5,0:5:15.01:0,15,150	0/0:2,0:2:0.47:0,0,1	0/0:2,0:2:6.01:0,6,62	0/0:6,0:6:18.04:0,18,212	0/0:5,0:5:15.04:0,15,177	1/1:3,13:16:39.06:384,39,0	1/1:3,5:8:15.03:153,15,0	1/1:3,26:28:66.14:670,66,0	0/0:3,0:3:6.02:0,6,74	0/0:3,0:3:9.03:0,9,110	0/0:4,0:4:9.02:0,9,103	0/0:6,0:6:4.20:0,4,16	1/1:4,3:7:10.73:81,11,0	1/1:3,8:11:21.04:209,21,0	1/1:0,2:2:6.01:59,6,0
chr10	84258554	.	GGGACTTTGGTTGA	G	10021.24	PASS	AB=0.510;AC=9;AF=0.161;AN=56;BaseQRankSum=14.160;DP=646;FS=1.938;HRun=0;HaplotypeScore=231.4349;InbreedingCoeff=0.8627;MQ=70.61;MQ0=0;MQRankSum=-12.502;QD=83.51;ReadPosRankSum=2.047;VQSLOD=4.7625;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:66.18:2631,66,0	0/0:15,0:15:45.15:0,45,2880	0/0:8,0:7:15.05:0,15,582	0/0:17,0:17:39.48:0,39,1286	0/0:19,0:19:57.18:0,57,3525	0/0:14,0:14:42.14:0,42,2521	0/0:37,0:37:99:0,111,6490	0/0:17,0:17:48.07:0,48,1845	0/0:27,0:27:81.28:0,81,5295	0/0:26,0:26:78.27:0,78,4956	0/0:13,0:13:39.13:0,39,2493	0/0:27,0:27:81.26:0,81,4634	0/0:25,0:25:75.26:0,75,4817	0/0:30,0:30:90.29:0,90,5527	1/1:0,32:32:66.23:2746,66,0	0/0:22,0:22:66.23:0,66,4339	0/0:30,0:30:90.28:0,90,5491	0/0:23,0:23:69.24:0,69,4400	0/0:31,0:31:93.31:0,93,4945	0/0:14,0:14:42.13:0,42,2521	0/0:38,0:38:99:0,114,6585	0/0:21,0:21:63.22:0,63,3890	0/0:16,0:16:48.16:0,48,3010	0/0:29,0:29:87.30:0,87,5561	1/1:0,15:15:21.07:875,21,0	0/1:1,25:26:99:2389,0,132	0/0:27,0:27:81.28:0,81,5084	1/1:0,13:13:33.11:1380,33,0
chr10	84260967	.	A	AACACACACACAC	3228.29	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.945;DP=693;FS=5.763;HRun=0;HaplotypeScore=238.6829;InbreedingCoeff=0.9686;MQ=69.11;MQ0=0;MQRankSum=-4.107;QD=34.71;ReadPosRankSum=-2.511;VQSLOD=2.1181;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:23.58:374,24,0	0/0:14,0:14:39.12:0,39,1038	0/0:34,0:29:61.11:0,61,831	0/0:37,0:36:59.54:0,60,1291	0/0:22,0:22:60.07:0,60,1240	0/0:19,0:19:57.16:0,57,1732	0/0:30,0:30:78.15:0,78,2138	0/0:34,0:34:90.20:0,90,1864	0/0:29,0:29:69.16:0,69,1928	0/0:26,0:26:65.79:0,66,1766	0/0:25,0:25:60.14:0,60,1607	0/0:32,0:32:93.27:0,93,2778	0/0:26,0:26:75.16:0,75,2041	0/0:21,0:21:63.19:0,63,1889	1/1:7,0:15:17.46:685,17,0	0/0:21,0:21:60.16:0,60,1853	0/0:32,0:32:90.29:0,90,2858	0/0:24,0:24:66.10:0,66,1799	0/0:19,0:19:48.14:0,48,1278	0/0:23,0:23:57.17:0,57,1715	0/0:38,0:38:99:0,105,2906	0/0:22,0:22:62.94:0,63,1570	0/0:19,0:19:57.16:0,57,1603	0/0:34,0:34:96.24:0,96,2992	1/1:16,0:16:15.02:525,15,0	1/1:12,11:25:53.95:1491,54,0	0/0:19,0:19:44.81:0,45,1085	1/1:2,7:10:6.02:322,6,0
chr10	84260988	.	A	ACACACACACACACG	1623.89	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=5.446;DP=672;FS=6.440;HRun=0;HaplotypeScore=259.8782;InbreedingCoeff=0.4592;MQ=65.93;MQ0=1;MQRankSum=-4.559;QD=17.84;ReadPosRankSum=-0.995;VQSLOD=1.7975;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:99:401,0,105	0/0:15,0:15:38.99:0,39,992	0/0:28,0:19:23.40:0,23,604	0/0:28,0:25:6.25:0,6,898	0/0:14,0:14:39.13:0,39,1241	0/0:26,0:26:72.15:0,72,2160	0/0:28,0:28:81.13:0,81,2279	0/0:31,0:30:25.29:0,25,1560	0/0:21,0:21:54.18:0,54,2083	0/0:25,0:25:68.97:0,69,1693	0/0:18,0:18:51.10:0,51,1643	0/0:34,0:34:99:0,99,3006	0/0:26,0:26:69.15:0,69,2190	0/0:23,0:23:60.16:0,60,2091	1/1:12,0:12:9.50:297,10,0	0/0:25,0:25:74.64:0,75,2089	0/0:35,0:35:93.44:0,93,3084	0/0:25,0:25:69.14:0,69,1954	0/0:24,0:24:59.83:0,60,1353	0/0:21,0:21:37.46:0,37,1726	0/0:42,0:42:99:0,114,3275	0/0:20,0:20:53.88:0,54,1693	0/0:22,0:22:55.07:0,55,1813	0/0:36,0:36:99:0,102,3330	1/1:2,8:20:9.03:571,9,0	0/1:21,0:20:99:259,0,129	0/0:14,0:14:42.08:0,42,1232	0/1:3,0:3:10.96:229,0,11
chr10	84262758	.	GA	G	1134.96	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.047;DP=465;FS=2.002;HRun=8;HaplotypeScore=57.1810;InbreedingCoeff=0.9907;MQ=84.22;MQ0=1;MQRankSum=-1.486;QD=22.70;ReadPosRankSum=3.088;VQSLOD=4.2045;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:51.07:0,51,582	0/0:9,0:9:21.05:0,21,238	0/0:17,0:16:22.18:0,22,220	0/0:20,0:19:33.35:0,33,317	0/0:20,0:20:60.11:0,60,690	0/0:14,0:14:33.10:0,33,397	0/0:16,0:16:36.11:0,36,433	0/0:13,0:13:33.04:0,33,360	0/0:12,0:12:30.09:0,30,361	0/0:16,0:16:39.12:0,39,469	0/0:16,0:16:45.11:0,45,527	0/0:16,0:16:42.08:0,42,479	0/0:19,0:19:51.16:0,51,613	0/0:11,0:11:30.01:0,30,342	1/1:3,13:16:39.05:369,39,0	0/0:15,0:15:44.72:0,45,506	0/0:15,0:16:48.15:0,48,577	0/0:20,0:19:45.14:0,45,542	0/0:21,0:21:60.13:0,60,669	0/0:19,0:19:57.17:0,57,679	0/0:18,0:18:36.11:0,36,433	0/0:19,0:19:54.12:0,54,633	0/0:12,0:12:33.10:0,33,397	0/0:12,0:12:36.09:0,36,421	0/0:17,0:17:39.12:0,39,469	1/1:1,27:28:81.07:762,81,0	0/0:22,0:22:54.17:0,54,650	1/1:1,5:6:15.02:145,15,0
chr10	84262788	.	C	CT	1940.51	PASS	AB=0.835;AC=22;AF=0.393;AN=56;BaseQRankSum=-3.568;DP=463;FS=2.670;HRun=12;HaplotypeScore=57.8414;InbreedingCoeff=0.3882;MQ=71.32;MQ0=1;MQRankSum=0.144;QD=7.86;ReadPosRankSum=-0.924;VQSLOD=2.0657;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:29:30.90:149,31,0	0/1:3,1:5:18.19:18,0,39	0/0:10,0:13:14.79:0,15,79	0/1:13,0:11:22.20:22,0,61	0/0:22,0:25:44.76:0,45,299	0/0:16,0:17:40.75:0,41,290	1/1:5,9:15:23.87:219,24,0	1/1:8,13:21:14.97:275,15,0	0/0:13,0:13:23.83:0,24,175	0/0:12,0:12:26.81:0,27,197	0/0:7,0:7:17.89:0,18,131	0/0:22,1:23:33.39:0,33,408	0/0:16,0:18:38.07:0,38,271	0/1:9,2:11:2.35:2,0,146	1/1:4,7:12:6.71:194,7,0	0/1:16,1:17:2.56:3,0,142	0/0:21,2:23:18.50:0,18,299	0/0:14,0:17:35.93:0,36,236	1/1:9,13:24:18.38:397,18,0	0/1:6,13:19:26.77:229,0,27	1/1:2,13:15:24.04:233,24,0	0/1:18,2:21:8.58:9,0,262	0/0:13,1:15:2.67:0,3,173	0/1:10,2:12:29.28:29,0,131	1/1:2,0:13:17.04:85,17,0	0/0:28,0:29:49.64:0,50,356	0/1:11,7:20:21.01:266,0,21	0/0:3,0:3:2.95:0,3,22
chr10	84263677	.	ATC	A	2539.30	PASS	AB=0.822;AC=17;AF=0.304;AN=56;BaseQRankSum=-1.204;DP=640;FS=5.925;HRun=0;HaplotypeScore=82.7137;InbreedingCoeff=0.5465;MQ=69.70;MQ0=22;MQRankSum=1.285;QD=10.24;ReadPosRankSum=-1.149;VQSLOD=2.1148;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:37:86.68:682,87,0	0/0:6,0:6:14.96:0,15,119	0/0:40,0:21:53.06:0,53,504	0/0:39,0:25:47.86:0,48,472	0/0:23,0:23:62.53:0,63,581	0/0:15,0:14:9.64:0,10,279	0/1:20,0:21:10.41:293,0,10	1/1:22,0:22:60.41:518,60,0	0/0:20,0:20:50.94:0,51,504	0/0:22,0:22:54.04:0,54,525	0/0:19,0:19:47.98:0,48,501	0/0:21,0:21:21.65:0,22,439	0/0:18,0:18:47.75:0,48,474	0/0:20,0:20:44.98:0,45,461	1/1:16,0:17:4.59:66,5,0	0/0:18,0:18:39.56:0,40,364	0/0:37,0:37:82.20:0,82,922	0/0:22,0:22:33.47:0,33,570	1/1:23,0:21:47.71:381,48,0	0/1:11,0:11:17.24:124,0,17	0/1:8,31:39:16.19:16,0,79	0/0:19,0:19:50.26:0,50,404	0/0:15,0:15:27.60:0,28,323	0/0:38,0:38:92.96:0,93,1015	1/1:14,0:14:9.73:115,10,0	1/1:24,0:24:20.55:317,21,0	0/1:5,21:26:27.69:60,0,28	0/1:13,0:13:15.69:157,0,16
chr10	84263679	.	C	CTGTG	483.31	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=3.998;DP=665;FS=9.153;HRun=0;HaplotypeScore=125.3340;InbreedingCoeff=0.5465;MQ=68.85;MQ0=24;MQRankSum=-1.363;QD=2.52;ReadPosRankSum=-3.500;VQSLOD=-0.1152;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:37:0.16:0,0,62	0/0:6,0:6:15.04:0,15,203	0/0:40,0:21:48.59:0,49,857	0/0:39,0:25:57.35:0,57,896	0/0:26,0:26:63.17:0,63,978	0/0:16,0:15:32.83:0,33,477	0/1:22,0:22:62.78:63,0,66	1/1:23,0:23:2.98:50,3,0	0/0:20,0:20:51.02:0,51,769	0/0:23,0:23:54.18:0,54,935	0/0:20,0:20:48.11:0,48,707	0/0:22,0:22:57.17:0,57,873	0/0:18,0:18:47.91:0,48,750	0/0:20,0:20:45.14:0,45,736	1/1:7,11:19:8.91:126,9,0	0/0:19,0:19:48.15:0,48,769	0/0:36,0:36:99:0,99,1565	0/0:23,0:23:63.08:0,63,991	0/1:23,0:21:5.40:16,0,5	0/1:13,0:13:13.02:13,0,17	0/0:43,0:42:20.79:0,21,206	0/0:20,0:20:52.10:0,52,778	0/0:16,0:16:36.07:0,36,539	0/0:39,0:39:93.26:0,93,1506	1/1:6,9:17:1.74:68,2,0	1/1:23,1:24:15.86:212,16,0	0/0:27,0:27:9.18:0,9,92	1/1:12,1:12:5.27:92,5,0
chr10	84263681	.	CTG	C	152.73	PASS	AB=0.965;AC=12;AF=0.222;AN=54;BaseQRankSum=1.944;DP=687;FS=7.187;HRun=0;HaplotypeScore=98.6821;InbreedingCoeff=0.1385;MQ=67.11;MQ0=25;MQRankSum=0.825;QD=0.61;ReadPosRankSum=-1.189;VQSLOD=1.2639;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:35:8.52:42,9,0	./.	0/0:40,0:21:0.47:0,0,1	0/0:38,0:24:0.47:0,0,1	0/0:26,0:26:23.98:0,24,255	0/1:18,0:17:9.68:10,0,185	0/0:21,0:21:12.03:0,12,158	0/0:26,0:25:3.73:0,4,16	0/0:20,0:20:18.06:0,18,262	0/0:27,0:27:0.98:0,1,110	0/0:19,0:19:15.85:0,16,178	0/1:25,0:25:53.99:61,0,54	0/0:17,0:17:11.79:0,12,135	0/1:21,0:21:1.89:2,0,122	0/0:20,0:20:11.37:0,11,95	0/1:16,3:19:2.03:27,0,2	0/1:34,2:36:31.09:31,0,297	0/1:24,1:25:12.88:13,0,207	0/0:23,0:21:2.98:0,3,21	0/0:13,0:13:11.97:0,12,129	0/0:48,0:46:7.35:0,7,352	1/1:23,0:23:11.88:89,12,0	0/1:16,1:17:14.69:15,0,169	0/0:39,0:39:20.14:0,20,353	0/0:21,0:20:8.03:0,8,57	0/0:22,0:22:29.92:0,30,257	0/1:29,0:29:3.83:4,0,123	0/0:13,0:12:12.02:0,12,130
chr10	84265483	.	GT	G	1057.33	PASS	AB=0.978;AC=19;AF=0.339;AN=56;BaseQRankSum=16.686;DP=540;FS=2.984;HRun=1;HaplotypeScore=77.6073;InbreedingCoeff=0.6982;MQ=82.16;MQ0=0;MQRankSum=-7.289;QD=4.68;ReadPosRankSum=-0.319;VQSLOD=0.2712;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:13.02:163,13,0	0/0:9,0:9:27.09:0,27,422	0/0:24,0:24:62.26:0,62,963	0/0:23,0:23:28.61:0,29,611	0/0:13,0:13:39.03:0,39,582	0/0:15,0:15:45.14:0,45,664	1/1:20,1:21:0.49:148,0,0	0/1:38,0:38:90.97:91,0,139	0/0:17,0:17:51.16:0,51,776	0/0:17,0:17:48.14:0,48,691	0/0:11,0:11:30.09:0,30,451	0/0:22,0:22:66.21:0,66,1021	0/0:16,0:16:48.15:0,48,730	0/0:21,0:21:63.21:0,63,976	1/1:15,0:15:34.08:117,34,0	0/0:16,0:16:45.14:0,45,680	0/0:34,0:34:99:0,102,1578	0/0:26,0:26:78.19:0,78,1157	0/1:27,2:29:54.61:110,0,55	1/1:13,0:13:23.19:81,23,0	1/1:20,0:20:44.71:171,45,0	0/0:14,0:14:42.13:0,42,646	0/0:12,0:12:36.06:0,36,475	0/0:24,0:24:69.22:0,69,1068	0/1:22,0:22:48.61:70,0,49	1/1:20,0:20:27.40:88,27,0	1/1:17,2:19:15.07:190,15,0	1/1:3,0:3:7.34:27,7,0
chr10	84265484	.	TC	T	6179.01	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=8.990;DP=539;FS=3.016;HRun=6;HaplotypeScore=62.1862;InbreedingCoeff=0.9910;MQ=83.09;MQ0=0;MQRankSum=-5.896;QD=27.46;ReadPosRankSum=-2.346;VQSLOD=4.4122;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:26:66.16:708,66,0	0/0:9,0:9:27.09:0,27,355	0/0:25,0:25:63.19:0,63,791	0/0:23,1:24:43.99:0,44,494	0/0:14,0:14:39.10:0,39,477	0/0:15,0:15:42.13:0,42,533	1/1:6,15:21:57.12:598,57,0	1/1:5,31:36:90.19:959,90,0	0/0:17,0:17:48.16:0,48,631	0/0:16,0:16:39.13:0,39,511	0/0:10,0:10:30.09:0,30,380	0/0:23,0:23:66.17:0,66,848	0/0:16,0:16:48.12:0,48,611	0/0:21,0:21:63.20:0,63,825	1/1:2,14:16:48.12:515,48,0	0/0:16,0:16:45.13:0,45,566	0/0:34,0:34:99:0,99,1302	0/0:24,0:24:69.22:0,69,907	1/1:6,23:29:75.14:783,75,0	1/1:0,13:13:30.08:323,30,0	1/1:0,20:20:57.14:612,57,0	0/0:14,0:14:42.14:0,42,551	0/0:11,0:11:24.06:0,24,300	0/0:25,0:25:72.22:0,72,933	1/1:4,18:22:48.11:516,48,0	1/1:0,20:20:57.09:586,57,0	1/1:7,12:19:48.04:483,48,0	1/1:0,3:3:9.02:97,9,0
chr10	84265490	.	CA	C	1211.14	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=16.142;DP=546;FS=0.000;HRun=1;HaplotypeScore=78.4017;InbreedingCoeff=0.6752;MQ=81.92;MQ0=0;MQRankSum=-2.200;QD=5.29;ReadPosRankSum=0.365;VQSLOD=0.2901;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,1:26:9.25:169,9,0	0/0:9,0:9:27.08:0,27,361	0/0:25,0:25:68.35:0,68,861	0/0:22,0:22:37.55:0,38,520	0/0:13,0:13:39.12:0,39,524	0/0:14,0:14:39.11:0,39,521	1/1:20,3:23:1.85:198,2,0	1/1:34,0:34:2.96:112,3,0	0/0:20,0:20:4.31:0,4,616	0/0:13,0:13:39.12:0,39,516	0/0:10,0:10:27.09:0,27,366	0/0:26,0:26:78.13:0,78,972	0/0:18,0:18:48.12:0,48,632	0/0:21,0:21:62.85:0,63,802	1/1:16,1:17:22.04:179,22,0	0/0:16,0:16:25.02:0,25,557	0/0:38,0:38:99:0,111,1414	0/0:23,0:23:69.19:0,69,910	0/1:27,0:27:3.85:127,0,4	0/1:15,0:15:21.21:48,0,21	1/1:21,0:21:22.07:134,22,0	0/0:15,0:15:45.14:0,45,610	0/0:8,0:8:21.04:0,21,275	0/0:26,0:26:75:0,75,959	1/1:19,0:19:14.20:104,14,0	0/1:26,0:26:56.77:57,0,111	1/1:14,4:18:21.90:246,22,0	1/1:3,0:3:7.55:29,8,0
chr10	84266177	.	A	AAGC	1036.14	PASS	AB=1.000;AC=5;AF=0.109;AN=46;BaseQRankSum=-4.773;DP=535;FS=0.000;HRun=0;HaplotypeScore=104.0972;InbreedingCoeff=0.4309;MQ=83.71;MQ0=2;MQRankSum=0.584;QD=13.12;ReadPosRankSum=-2.263;VQSLOD=2.8500;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:13.10:13,0,18	0/0:4,0:4:3.01:0,3,40	0/0:42,0:39:12.01:0,12,121	0/0:39,0:32:8.64:0,9,104	./.	0/0:9,0:9:6.01:0,6,67	0/0:15,0:15:20.57:0,21,129	0/0:14,0:29:5.93:0,6,40	0/0:20,0:20:36.05:0,36,406	0/0:13,0:13:2.68:0,3,27	./.	0/0:31,0:31:63.13:0,63,749	0/0:15,0:15:27.06:0,27,332	0/0:25,0:25:48.10:0,48,571	0/0:20,0:20:30.07:0,30,367	0/0:19,0:19:30.05:0,30,342	0/0:46,0:46:78.13:0,78,899	0/0:31,0:31:69.07:0,69,796	0/0:11,0:16:8.93:0,9,63	0/0:7,0:9:5.95:0,6,42	0/0:26,0:26:5.94:0,6,41	0/0:5,0:5:3:0,3,25	./.	1/1:8,34:42:57.06:1111,57,0	./.	1/1:16,0:16:4.80:24,5,0	0/0:17,0:16:26.73:0,27,183	./.
chr10	84266196	.	AGC	A	87.43	PASS	AB=0.833;AC=7;AF=0.125;AN=56;BaseQRankSum=8.224;DP=488;FS=10.403;HRun=0;HaplotypeScore=83.7518;InbreedingCoeff=0.0815;MQ=55.40;MQ0=10;MQRankSum=-6.204;QD=0.93;ReadPosRankSum=2.588;VQSLOD=0.0762;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:23.53:0,24,290	0/0:3,0:3:9.03:0,9,134	0/0:26,0:20:60.09:0,60,862	0/0:39,0:21:60.12:0,60,812	0/0:6,0:6:8.78:0,9,116	0/0:8,0:8:24.06:0,24,327	0/1:12,4:16:25.08:25,0,174	0/1:29,0:28:14.80:15,0,526	0/0:17,0:17:51.17:0,51,919	0/0:5,0:5:12:0,12,179	0/0:5,0:5:1.81:0,2,37	0/0:33,0:33:99:0,99,1710	0/0:20,0:20:57.19:0,57,956	0/0:24,0:24:72.22:0,72,1286	0/0:15,0:15:45.12:0,45,776	0/0:19,0:19:57.18:0,57,997	0/0:42,0:42:99:0,126,2184	0/0:34,0:34:98.33:0,98,1773	0/1:10,3:13:24.56:25,0,260	1/1:2,2:4:5.91:39,6,0	0/1:17,2:19:1.79:2,0,205	0/0:4,0:4:12.04:0,12,196	0/0:1,0:1:3.01:0,3,39	0/0:45,0:45:87.15:0,87,1228	0/0:7,0:7:8.66:0,9,116	0/0:13,0:13:32.53:0,33,439	0/1:6,7:12:70.91:104,0,71	0/0:4,0:3:9.03:0,9,127
chr10	84266199	.	AGCAGCAG	A	872.17	PASS	AB=0.845;AC=7;AF=0.125;AN=56;BaseQRankSum=8.797;DP=502;FS=6.928;HRun=0;HaplotypeScore=127.3954;InbreedingCoeff=0.0782;MQ=55.39;MQ0=11;MQRankSum=-7.056;QD=8.39;ReadPosRankSum=3.545;VQSLOD=1.5587;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:17.61:0,18,322	0/0:5,0:5:15.05:0,15,296	0/0:25,0:18:54.18:0,54,1234	0/0:42,0:24:61.54:0,62,1149	0/0:5,0:5:8.78:0,9,133	0/0:8,0:8:20.92:0,21,476	0/1:13,4:17:78.11:240,0,78	0/1:32,0:31:42.16:42,0,340	0/0:18,0:18:54.17:0,54,1697	0/0:7,0:7:17.98:0,18,277	0/0:5,0:5:6.26:0,6,86	0/0:34,0:34:99:0,102,3128	0/0:20,0:20:57.19:0,57,1734	0/0:23,0:23:69.24:0,69,2359	0/0:17,0:17:51.17:0,51,1547	0/0:18,0:18:54.19:0,54,1755	0/0:41,0:41:99:0,123,3836	0/0:34,0:34:99:0,102,3269	0/1:12,3:15:99:123,0,282	1/1:3,2:5:6.02:108,6,0	0/1:19,2:21:98.69:99,0,152	0/0:4,0:4:12.04:0,12,281	0/0:1,0:1:3.01:0,3,48	0/0:47,0:47:93.05:0,93,2704	0/0:9,0:9:11.86:0,12,234	0/0:10,0:10:26.43:0,26,412	0/1:7,7:13:50.38:390,0,50	0/0:4,0:3:8.24:0,8,140
chr10	84266206	.	G	GCAACAACAACAA	421.32	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=4.840;DP=544;FS=0.724;HRun=0;HaplotypeScore=201.2045;InbreedingCoeff=0.0152;MQ=54.50;MQ0=12;MQRankSum=-6.097;QD=2.85;ReadPosRankSum=-6.341;VQSLOD=0.8570;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:5,14:34:4.20:230,4,0	0/0:7,0:7:18.04:0,18,467	0/0:25,0:16:29.19:0,29,500	0/0:36,0:17:7.49:0,7,582	0/0:8,0:8:15.57:0,16,278	0/0:11,0:11:20.72:0,21,453	0/1:20,0:20:63.14:63,0,296	0/1:35,0:34:48.26:48,0,360	0/0:19,0:19:54.17:0,54,1459	0/0:8,0:8:13.43:0,13,178	0/0:6,0:6:6.18:0,6,75	0/0:35,0:35:89.83:0,90,2636	0/0:17,0:17:48.15:0,48,1409	0/0:24,0:24:72.22:0,72,2195	0/0:17,0:17:45:0,45,1179	0/0:17,0:17:51.08:0,51,1310	0/0:41,0:41:99:0,119,3265	0/0:32,0:32:96.17:0,96,2644	0/1:17,0:17:43.60:44,0,328	0/0:6,0:6:1.02:0,1,132	0/1:23,0:23:66.28:66,0,356	0/0:9,0:9:20.89:0,21,215	0/0:6,0:6:3.01:0,3,49	0/0:47,0:47:93.14:0,93,2030	0/0:9,0:9:1.63:0,2,47	0/0:12,0:12:24.60:0,25,490	0/1:18,0:18:95.30:95,0,522	0/0:4,0:3:3.46:0,3,24
chr10	84266460	.	T	TTA	853.71	PASS	AB=0.869;AC=21;AF=0.618;AN=34;BaseQRankSum=0.879;DP=179;FS=1.053;HRun=0;HaplotypeScore=26.4001;InbreedingCoeff=0.5186;MQ=65.95;MQ0=2;MQRankSum=0.534;QD=8.21;ReadPosRankSum=-1.288;VQSLOD=2.7680;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:19:8.48:0,8,42	1/1:2,0:3:3:26,3,0	./.	0/1:9,0:5:0:0,0,0	0/0:7,0:7:18.05:0,18,208	0/1:5,0:5:2.95:3,0,61	./.	1/1:26,0:26:15.71:142,16,0	0/0:10,0:11:20.88:0,21,213	1/1:7,0:7:6:55,6,0	1/1:1,0:1:3:26,3,0	0/0:5,0:5:6.02:0,6,70	0/0:5,0:6:11.87:0,12,118	./.	./.	./.	1/1:8,1:16:18.01:178,18,0	0/1:6,10:17:1.27:415,0,1	./.	./.	./.	./.	./.	1/1:5,0:6:3:26,3,0	./.	1/1:3,0:4:3:26,3,0	1/1:4,0:4:3:25,3,0	1/1:6,0:6:8.84:59,9,0
chr10	84267202	.	C	CCA	177.55	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.599;DP=1130;FS=7.114;HRun=0;HaplotypeScore=173.2930;InbreedingCoeff=0.9712;MQ=60.76;MQ0=1;MQRankSum=-2.144;QD=9.34;ReadPosRankSum=-1.984;VQSLOD=2.1695;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,147,1805	0/0:18,0:18:45.14:0,45,563	0/0:38,0:33:14.46:0,14,406	0/0:50,0:40:79.03:0,79,836	0/0:30,0:30:78.25:0,78,976	0/0:26,0:26:66.19:0,66,811	0/0:44,0:44:99:0,105,1309	0/0:46,0:46:99:0,99,1207	0/0:56,0:56:99:0,156,1936	0/0:52,0:52:99:0,132,1650	0/0:20,0:20:51.16:0,51,637	0/0:56,0:56:99:0,140,1704	0/0:49,0:49:99:0,132,1609	0/0:42,0:42:99:0,114,1399	0/0:63,0:63:99:0,156,1892	0/0:48,0:48:99:0,108,1349	0/0:41,0:40:99:0,99,1237	0/0:31,0:32:69.02:0,69,822	0/0:21,0:21:48.15:0,48,589	0/0:27,0:27:45.01:0,45,562	0/0:72,0:71:99:0,159,1961	0/0:36,0:37:93.13:0,93,1138	0/0:33,0:33:78.23:0,78,961	0/0:63,0:63:99:0,126,1558	1/1:1,18:19:17.51:268,18,0	0/0:45,0:45:99:0,105,1310	0/0:34,0:35:93.10:0,93,1123	0/0:11,0:11:24.02:0,24,269
chr10	84267478	.	GCA	G	5616.60	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=9.935;DP=1092;FS=5.559;HRun=0;HaplotypeScore=188.6807;InbreedingCoeff=0.8764;MQ=61.72;MQ0=10;MQRankSum=-0.758;QD=16.23;ReadPosRankSum=-2.557;VQSLOD=4.1702;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:50.86:0,51,841	0/0:14,0:14:27.09:0,27,437	0/1:62,0:26:15.58:16,0,405	0/0:62,0:35:47.39:0,47,803	0/0:26,0:26:66.23:0,66,1082	0/0:31,0:31:74.74:0,75,1195	1/1:11,23:34:66.06:811,66,0	1/1:33,29:63:99:1430,117,0	0/0:50,1:51:91.88:0,92,2001	0/0:48,0:48:99:0,123,2030	0/0:16,1:17:1.91:0,2,557	0/0:42,0:42:66.85:0,67,1596	0/0:40,1:41:61.80:0,62,1542	0/0:45,0:45:83.13:0,83,1866	0/0:50,1:51:49.68:0,50,1295	0/0:53,0:53:99:0,138,2220	0/0:27,0:27:69.20:0,69,1096	0/0:31,0:31:72.87:0,73,1203	1/1:14,10:24:28.36:406,28,0	1/1:6,12:18:36.11:450,36,0	1/1:44,47:89:99:1361,110,0	0/0:29,0:29:63.21:0,63,1040	0/0:22,0:22:54.17:0,54,858	0/0:63,0:63:99:0,160,2615	1/1:4,22:26:20.71:360,21,0	0/0:35,0:35:86.77:0,87,1367	1/1:11,17:28:66.17:784,66,0	0/0:18,0:18:36.12:0,36,594
chr10	84267538	.	C	CT	673.46	PASS	AB=0.978;AC=8;AF=0.143;AN=56;BaseQRankSum=12.257;DP=890;FS=0.514;HRun=0;HaplotypeScore=182.5116;InbreedingCoeff=0.1014;MQ=55.65;MQ0=7;MQRankSum=-9.678;QD=3.42;ReadPosRankSum=-3.517;VQSLOD=2.6885;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,1:26:45.04:45,0,101	0/0:15,0:14:38.98:0,39,497	0/0:44,0:22:61.40:0,61,791	0/0:38,0:22:42.29:0,42,693	0/0:32,0:31:87.26:0,87,1186	0/0:31,0:31:90.12:0,90,1185	0/0:23,0:23:2.88:0,3,171	0/1:28,0:28:99:126,0,631	0/0:39,0:39:99:0,111,1420	0/0:44,0:44:99:0,126,1665	0/0:12,0:12:33.10:0,33,443	0/0:51,0:51:99:0,147,1949	0/0:38,0:38:99:0,114,1483	0/0:37,0:37:99:0,111,1435	0/0:38,0:38:2.31:0,2,40	0/0:45,0:45:99:0,126,1687	0/0:21,0:20:48.63:0,49,662	0/0:27,0:27:68.94:0,69,867	0/1:22,0:19:93.94:94,0,298	0/0:24,0:24:20.66:0,21,218	0/1:42,5:44:5.65:6,0,252	0/0:40,0:40:99:0,111,1480	0/0:24,0:24:69.23:0,69,961	0/0:52,0:52:99:0,144,1851	1/1:1,29:30:63.93:513,64,0	0/1:32,0:32:19.74:20,0,778	0/0:18,0:18:2.77:0,3,288	0/1:12,0:12:1.83:2,0,160
chr10	84267539	.	A	AACACACACACACACTATGTGAG	17431.89	PASS	AB=0.723;AC=13;AF=0.232;AN=56;BaseQRankSum=5.937;DP=947;FS=2.031;HRun=0;HaplotypeScore=515.9228;InbreedingCoeff=0.1101;MQ=55.39;MQ0=7;MQRankSum=-14.948;QD=47.63;ReadPosRankSum=-1.312;VQSLOD=1.6473;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:35:70.59:705,0,71	0/0:16,0:15:40.38:0,40,1893	0/0:41,0:22:55.54:0,56,1591	0/0:36,0:21:39.97:0,40,1331	0/0:31,0:30:83.84:0,84,4174	0/0:31,0:31:87.08:0,87,3862	0/1:17,0:27:94.35:1245,0,94	0/1:27,0:38:99:3069,0,130	0/0:39,0:39:99:0,114,5703	0/0:43,0:43:99:0,126,5746	0/0:12,0:12:30.10:0,30,1202	0/0:53,0:53:99:0,147,6989	0/0:37,0:37:99:0,111,4825	0/0:37,0:37:99:0,111,5019	0/1:19,1:49:28.47:405,0,28	0/0:44,0:44:99:0,123,6064	0/0:22,0:21:48.15:0,48,2236	0/0:26,0:26:65.88:0,66,2427	1/1:15,0:25:62.47:2423,62,0	0/1:20,0:28:99:165,0,140	0/1:43,0:49:99:609,0,186	0/0:40,0:40:99:0,110,5349	0/0:24,0:24:68.92:0,69,3253	0/0:49,0:49:99:0,138,6146	1/1:5,0:35:52.08:952,52,0	0/1:17,0:37:53.52:4476,0,54	0/1:16,0:24:22.44:1651,0,22	0/1:5,0:13:11.05:1733,0,11
chr10	84268184	.	AAAG	A	431.84	PASS	AB=0.987;AC=21;AF=0.477;AN=44;BaseQRankSum=2.622;DP=306;FS=10.103;HRun=0;HaplotypeScore=60.3896;InbreedingCoeff=-0.5234;MQ=39.89;MQ0=40;MQRankSum=-2.169;QD=1.73;ReadPosRankSum=-1.419;VQSLOD=0.2492;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:18:14.49:0,14,109	0/0:11,0:10:17.35:0,17,98	1/1:3,0:1:2.98:21,3,0	0/1:5,0:2:5.92:15,0,6	0/1:26,1:26:54.69:55,0,208	0/1:13,0:12:59.30:59,0,110	./.	./.	0/1:11,0:11:22.18:22,0,68	0/1:15,0:13:2.75:3,0,69	0/1:11,0:10:17.50:17,0,94	0/1:9,2:10:45:45,0,119	0/1:7,0:7:15.52:16,0,49	0/1:9,0:9:42.36:42,0,49	0/1:12,0:11:25.04:31,0,25	0/1:10,0:10:40.38:40,0,93	0/1:21,0:15:5.11:5,0,133	0/1:20,0:18:35.17:35,0,151	./.	./.	./.	0/0:16,0:14:5.94:0,6,95	0/1:11,0:10:5.94:6,0,122	0/1:11,0:8:3.72:4,0,38	1/1:1,0:1:2.68:11,3,0	0/1:35,1:30:99:116,0,138	./.	0/1:16,0:9:19.48:19,0,22
chr10	84268185	.	AAG	A	707.81	PASS	AB=0.956;AC=23;AF=0.523;AN=44;BaseQRankSum=3.571;DP=303;FS=9.796;HRun=0;HaplotypeScore=53.2234;InbreedingCoeff=-0.7114;MQ=40.01;MQ0=39;MQRankSum=-1.863;QD=2.47;ReadPosRankSum=0.662;VQSLOD=0.2964;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:17:24.48:24,0,25	0/0:10,0:9:12.71:0,13,84	1/1:4,0:1:2.98:22,3,0	0/1:5,0:2:5.92:16,0,6	0/1:27,0:26:89.12:89,0,100	0/1:11,1:11:71.04:78,0,71	./.	./.	0/1:11,0:11:22.54:47,0,23	0/1:8,7:13:22.07:22,0,58	0/1:11,0:10:33.03:33,0,62	0/1:11,0:10:30.52:31,0,74	0/1:7,0:7:18.90:19,0,24	0/1:9,0:9:36.41:42,0,36	0/1:6,6:11:3.43:64,0,3	0/1:10,0:10:45.64:56,0,46	0/1:21,0:15:24.88:25,0,85	0/1:19,0:17:54.28:54,0,108	./.	./.	./.	0/1:15,1:14:18.69:19,0,49	0/1:11,0:10:14.45:14,0,56	0/1:11,0:8:3.59:24,0,4	1/1:1,0:1:2.68:11,3,0	0/1:33,2:30:99:122,0,126	./.	0/1:17,0:10:26.82:27,0,35
chr10	84268186	.	AG	A	913.12	PASS	AB=0.926;AC=25;AF=0.568;AN=44;BaseQRankSum=4.451;DP=300;FS=1.865;HRun=1;HaplotypeScore=46.8582;InbreedingCoeff=-0.6688;MQ=40.27;MQ0=39;MQRankSum=-0.852;QD=3.11;ReadPosRankSum=2.688;VQSLOD=-0.0657;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,3:17:10.57:62,0,11	0/1:9,0:8:1.03:1,0,69	1/1:2,0:1:2.98:22,3,0	0/1:3,1:2:5.92:16,0,6	0/1:24,2:26:26.64:139,0,27	0/1:12,0:11:38.10:66,0,38	./.	./.	0/1:10,1:11:0.58:86,0,1	0/1:15,0:13:10.66:11,0,40	0/1:7,3:10:36.86:46,0,37	0/1:11,0:10:24.36:24,0,29	0/1:5,1:6:7.59:34,0,8	0/1:8,0:9:25.26:38,0,25	0/1:10,0:10:8.09:24,0,8	0/1:9,0:10:24.35:74,0,24	0/1:21,0:15:46.19:46,0,49	0/1:18,1:17:70.07:106,0,70	./.	./.	./.	0/1:15,1:14:21.56:37,0,22	0/1:11,0:10:19.90:20,0,23	1/1:11,0:8:12.97:70,13,0	1/1:1,0:1:2.68:11,3,0	0/1:34,0:30:88.28:88,0,127	./.	0/1:17,0:10:19.06:19,0,38
chr10	84269680	.	AC	A	1508.28	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.401;DP=705;FS=0.580;HRun=2;HaplotypeScore=71.5876;InbreedingCoeff=0.9995;MQ=82.55;MQ0=0;MQRankSum=-1.730;QD=33.52;ReadPosRankSum=1.699;VQSLOD=3.9179;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1641	0/0:12,0:12:36.12:0,36,540	0/0:14,0:14:33.04:0,33,460	0/0:27,0:27:63.77:0,64,824	0/0:29,0:29:87.26:0,87,1244	0/0:23,0:23:69.23:0,69,1034	0/0:28,0:28:84.28:0,84,1259	0/0:27,0:27:78.26:0,78,1150	0/0:27,0:27:81.27:0,81,1214	0/0:22,0:22:66.22:0,66,989	0/0:15,0:15:42.14:0,42,626	0/0:35,0:35:99:0,102,1501	0/0:26,0:26:78.26:0,78,1168	0/0:21,0:21:63.21:0,63,944	0/0:27,0:27:81.27:0,81,1213	0/0:23,0:23:69.23:0,69,1033	0/0:30,0:30:90.29:0,90,1328	0/0:34,0:34:96.33:0,96,1436	0/0:18,0:18:51.17:0,51,764	0/0:24,0:24:72.24:0,72,1076	0/0:41,0:41:99:0,120,1754	0/0:30,0:30:87.29:0,87,1304	0/0:11,0:11:33.11:0,33,494	0/0:38,0:38:99:0,108,1573	0/0:19,0:19:54.18:0,54,809	1/1:1,25:26:33.44:929,33,0	0/0:21,0:21:60.19:0,60,879	1/1:0,19:19:54.18:701,54,0
chr10	84270475	.	CG	C	3004.82	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.317;DP=441;FS=0.000;HRun=5;HaplotypeScore=54.7343;InbreedingCoeff=0.9516;MQ=87.04;MQ0=0;MQRankSum=-2.644;QD=28.62;ReadPosRankSum=0.058;VQSLOD=3.6452;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.22:0,90,1172	0/0:5,0:5:9.03:0,9,122	0/0:25,0:25:64.69:0,65,811	0/0:16,0:15:2.66:0,3,294	0/0:18,0:18:51.13:0,51,659	0/0:19,0:19:57.19:0,57,778	1/1:0,18:18:48.14:544,48,0	1/1:1,15:16:45.06:488,45,0	0/0:11,0:11:33.07:0,33,403	0/0:19,0:19:57.18:0,57,764	0/0:11,0:11:33.10:0,33,434	0/0:15,0:15:45.15:0,45,614	0/0:10,0:10:27.09:0,27,369	0/0:10,0:10:24.05:0,24,309	0/0:28,0:28:84.27:0,84,1129	0/0:12,0:12:36:0,36,450	0/0:31,0:31:93.31:0,93,1268	0/0:24,0:24:72.20:0,72,961	1/1:1,16:17:45.07:471,45,0	1/1:1,9:10:27.08:306,27,0	1/1:2,23:25:66.19:748,66,0	0/0:7,0:7:21.06:0,21,270	0/0:9,0:9:17.78:0,18,201	0/0:13,0:13:36.12:0,36,491	1/1:0,6:6:18.05:204,18,0	0/0:15,0:15:42.12:0,42,545	1/1:0,13:13:39.11:442,39,0	0/0:8,0:8:21.07:0,21,287
chr10	84272706	.	C	CCAAA	9763.39	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-10.661;DP=609;FS=1.174;HRun=0;HaplotypeScore=95.0545;InbreedingCoeff=0.9984;MQ=69.55;MQ0=1;MQRankSum=-5.143;QD=61.79;ReadPosRankSum=-1.941;VQSLOD=6.1338;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.31:0,90,1617	0/0:11,0:11:33.11:0,33,598	0/0:15,0:13:39.13:0,39,659	0/0:18,0:17:39.02:0,39,665	0/0:27,0:27:75.23:0,75,1298	0/0:22,0:22:63.22:0,63,1142	1/1:4,17:21:48.16:1250,48,0	1/1:10,22:33:87.30:2128,87,0	0/0:12,0:12:36.12:0,36,646	0/0:37,0:37:99:0,111,1955	0/0:23,0:23:60.19:0,60,1045	0/0:24,0:24:66.20:0,66,1165	0/0:19,0:19:51.16:0,51,897	0/0:24,0:24:72.21:0,72,1237	0/0:15,0:15:39.13:0,39,699	0/0:17,0:17:48.16:0,48,873	0/0:22,0:22:57.20:0,57,1031	0/0:23,0:23:63.17:0,63,1085	1/1:3,12:16:42.12:1018,42,0	1/1:4,24:28:72.21:1756,72,0	1/1:3,8:12:18.06:470,18,0	0/0:17,0:17:42.14:0,42,757	0/0:24,0:24:54.19:0,54,971	0/0:22,0:22:60.21:0,60,1090	1/1:4,18:22:57.19:1414,57,0	0/0:33,0:33:96.31:0,96,1672	1/1:2,23:25:66.23:1727,66,0	0/0:12,0:12:36.12:0,36,655
chr10	84273157	.	A	AGT	492.26	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=-5.442;DP=164;FS=9.066;HRun=0;HaplotypeScore=22.6936;InbreedingCoeff=0.3657;MQ=87.17;MQ0=0;MQRankSum=-0.415;QD=28.96;ReadPosRankSum=1.868;VQSLOD=4.0406;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:17:33.11:585,33,0	0/0:1,0:1:3.01:0,3,41	0/0:6,0:6:18.06:0,18,236	0/0:7,0:6:15.05:0,15,206	0/0:5,0:5:15.05:0,15,206	0/0:4,0:4:9.02:0,9,107	0/0:14,0:13:33.11:0,33,452	0/0:5,0:5:15.05:0,15,205	0/0:2,0:2:6.02:0,6,82	0/0:5,0:5:9.03:0,9,123	0/0:8,0:8:24.07:0,24,313	./.	0/0:2,0:2:3.01:0,3,41	0/0:5,0:5:15.05:0,15,206	0/0:4,0:4:12.04:0,12,165	0/0:4,0:4:12.03:0,12,149	0/0:12,0:12:33.08:0,33,434	0/0:11,0:11:33.09:0,33,436	0/0:6,0:6:18.04:0,18,217	0/0:3,0:3:9.03:0,9,124	0/0:11,0:11:33.11:0,33,453	0/0:2,0:2:6.02:0,6,82	0/0:2,0:2:6.01:0,6,66	0/0:10,0:10:30.10:0,30,412	0/0:14,0:14:36.12:0,36,493	0/0:2,0:2:6.02:0,6,82	0/0:1,0:1:3.01:0,3,41	0/0:1,0:1:3.01:0,3,41
chr10	84273878	.	T	TCTGAAGGAAATGCCAGGTAG	40991.06	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=2.731;DP=657;FS=10.494;HRun=0;HaplotypeScore=322.9843;InbreedingCoeff=0.9999;MQ=82.23;MQ0=0;MQRankSum=-18.697;QD=196.13;ReadPosRankSum=-3.471;VQSLOD=3.2839;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,6314	0/0:13,0:13:36.12:0,36,1955	0/0:27,0:27:69.22:0,69,2631	0/0:23,0:23:53.07:0,53,2096	0/0:17,0:17:51.17:0,51,2602	0/0:15,0:15:39.13:0,39,1994	1/1:26,7:35:99:6808,100,0	1/1:32,0:32:96.33:7312,96,0	0/0:29,0:29:81.26:0,81,4122	0/0:21,0:20:54.15:0,54,2683	0/0:21,0:21:60.21:0,60,3110	0/0:32,0:32:96.32:0,96,4999	0/0:20,0:20:57.18:0,57,2851	0/0:20,0:20:60.19:0,60,3028	1/1:22,12:36:99:8367,99,0	0/0:25,0:25:69.24:0,69,3679	0/0:25,0:25:72.25:0,72,3771	0/0:27,0:27:75.24:0,75,3958	1/1:14,3:19:51.14:3522,51,0	1/1:15,8:24:57.20:4120,57,0	1/1:16,3:24:33.11:2277,33,0	0/0:23,0:23:66.23:0,66,3469	0/0:14,0:14:39.13:0,39,2070	0/0:26,0:26:78.27:0,78,4110	1/1:13,8:23:60.21:5063,60,0	0/0:16,0:16:42.14:0,42,2163	1/1:7,9:16:45.15:3523,45,0	0/0:12,0:12:36.12:0,36,1793
chr10	84274379	.	GC	G	763.36	PASS	AB=0.955;AC=18;AF=0.346;AN=52;BaseQRankSum=0.714;DP=318;FS=5.291;HRun=11;HaplotypeScore=48.6098;InbreedingCoeff=0.3058;MQ=81.48;MQ0=1;MQRankSum=0.945;QD=3.91;ReadPosRankSum=0.148;VQSLOD=-0.2682;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:0:0,0,0	./.	0/0:19,0:10:5.94:0,6,44	0/0:17,0:14:11.46:0,11,92	0/0:4,0:4:2.99:0,3,24	1/1:8,3:11:2.96:22,3,0	1/1:15,11:29:13.16:297,13,0	1/1:7,2:9:5.96:47,6,0	0/1:9,1:10:9.69:10,0,86	0/0:7,0:7:6.02:0,6,64	0/0:2,0:2:2.90:0,3,16	0/1:19,1:20:15.99:16,0,154	0/0:10,0:10:13.22:0,13,107	0/0:13,0:13:21.51:0,22,212	1/1:19,0:19:2.13:33,2,0	0/0:3,0:3:3.01:0,3,32	0/1:22,1:23:30.45:30,0,294	0/0:8,0:8:16.59:0,17,164	1/1:8,8:16:24.13:151,24,0	./.	1/1:29,9:38:1.20:222,1,0	0/0:6,0:6:0:0,0,0	0/0:2,0:2:3.01:0,3,32	0/1:7,0:7:12.74:13,0,108	0/0:4,0:4:3.15:0,3,12	0/0:11,0:11:5.92:0,6,38	1/1:6,7:13:8.83:73,9,0	0/0:4,0:4:1.55:0,2,4
chr10	84274388	.	CCCG	C	602.12	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=3.696;DP=278;FS=14.115;HRun=0;HaplotypeScore=52.2201;InbreedingCoeff=0.3580;MQ=84.13;MQ0=1;MQRankSum=-1.760;QD=15.44;ReadPosRankSum=2.303;VQSLOD=1.9612;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:9.46:0,9,109	0/0:1,0:1:2.97:0,3,20	0/0:21,0:12:16.23:0,16,135	0/0:15,0:12:20.21:0,20,177	0/1:2,0:2:0:0,0,0	0/1:8,0:8:6.99:14,0,7	0/0:27,0:27:65.19:0,65,465	0/0:7,0:7:14.91:0,15,116	0/0:11,0:11:29.70:0,30,297	0/0:5,0:5:8.99:0,9,140	0/0:1,0:1:3:0,3,29	0/0:18,0:18:12.84:0,13,336	0/0:8,0:8:16.39:0,16,171	0/0:14,0:14:32.57:0,33,383	1/1:1,19:20:45.15:680,45,0	0/0:2,0:2:5.98:0,6,80	0/0:19,0:19:50.96:0,51,669	0/0:7,0:7:13.71:0,14,253	0/0:12,0:12:9.36:0,9,176	0/0:1,0:1:3:0,3,25	0/0:32,0:32:23.74:0,24,426	1/1:3,0:3:0.47:1,0,0	0/0:3,0:3:5.70:0,6,74	0/0:7,0:7:20.94:0,21,268	0/1:6,0:6:16.51:18,0,17	0/0:5,0:5:8.93:0,9,77	0/0:12,0:12:14.30:0,14,120	0/0:3,0:3:1.82:0,2,5
chr10	84274748	.	G	GT	370.24	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=2.503;DP=216;FS=20.567;HRun=0;HaplotypeScore=34.0458;InbreedingCoeff=0.4106;MQ=87.94;MQ0=3;MQRankSum=-0.075;QD=12.34;ReadPosRankSum=5.848;VQSLOD=2.1716;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:30:18.22:459,18,0	0/0:4,0:4:8.99:0,9,77	0/0:21,0:13:26.27:0,26,216	0/0:17,0:11:16.94:0,17,85	0/0:3,0:3:6.01:0,6,66	0/0:7,0:7:11.99:0,12,101	0/0:15,0:15:25.81:0,26,166	0/0:3,0:3:0:0,0,0	0/0:8,0:8:12:0,12,104	0/0:3,0:3:8.96:0,9,75	0/0:2,0:2:3:0,3,27	0/0:12,0:12:29.92:0,30,245	0/0:4,0:4:3:0,3,26	0/0:6,0:6:14.97:0,15,125	0/0:9,0:9:23.84:0,24,186	0/0:6,0:6:12:0,12,104	0/0:9,0:9:23.95:0,24,195	0/0:11,0:11:32.94:0,33,277	0/0:4,0:4:11.96:0,12,97	./.	0/0:8,0:8:18:0,18,159	0/0:1,0:1:3:0,3,27	0/0:3,0:3:2.51:0,3,6	0/0:5,0:5:6:0,6,53	0/0:1,0:1:2.99:0,3,24	0/0:6,0:6:8.98:0,9,74	0/0:10,0:9:17.92:0,18,139	0/0:6,0:6:8.95:0,9,80
chr10	84275258	.	CGGCA	C	115.66	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=4.093;DP=527;FS=1.537;HRun=0;HaplotypeScore=84.4687;InbreedingCoeff=0.2973;MQ=73.89;MQ0=0;MQRankSum=-1.433;QD=2.82;ReadPosRankSum=-1.454;VQSLOD=1.0730;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:42.14:0,42,973	0/0:10,0:10:12.04:0,12,289	0/1:13,0:13:16.68:17,0,165	0/1:17,0:17:3.17:3,0,42	0/0:7,0:7:6.02:0,6,144	0/0:11,0:11:15.05:0,15,365	0/0:32,0:32:63.22:0,63,1442	0/0:17,0:17:15.05:0,15,360	0/0:15,0:15:39.13:0,39,944	0/0:16,0:16:15.05:0,15,348	0/0:6,0:6:3.01:0,3,73	0/0:23,0:23:27.09:0,27,630	0/0:18,0:18:21.07:0,21,509	0/0:25,0:25:48.15:0,48,1083	0/0:19,0:19:24.08:0,24,560	0/0:15,0:15:30.09:0,30,637	0/0:35,0:35:60.21:0,60,1459	0/0:23,0:23:48.16:0,48,1092	0/0:12,0:12:9.03:0,9,217	0/0:6,0:6:12.04:0,12,245	0/0:78,0:77:99:0,105,2414	0/0:4,0:4:3.01:0,3,73	0/0:5,0:5:6.02:0,6,144	0/0:31,0:31:51.18:0,51,1218	1/1:6,5:11:12.04:196,12,0	0/0:14,0:14:10.28:0,10,222	0/0:20,0:19:45.13:0,45,944	0/0:7,0:7:9.03:0,9,219
chr10	84275677	.	G	GAC	740.06	PASS	AB=0.922;AC=20;AF=0.370;AN=54;BaseQRankSum=1.996;DP=406;FS=2.800;HRun=0;HaplotypeScore=94.7585;InbreedingCoeff=0.0854;MQ=67.87;MQ0=7;MQRankSum=-2.773;QD=3.20;ReadPosRankSum=-1.791;VQSLOD=2.2066;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,5:26:54.55:69,0,55	0/0:4,0:4:3.01:0,3,33	0/0:21,0:13:2.80:0,3,13	0/1:25,0:15:0:0,0,0	0/0:7,0:6:3.01:0,3,33	0/0:17,0:17:18.52:0,19,197	0/1:17,8:25:46.41:138,0,46	1/1:12,0:12:0.89:2,1,0	0/1:7,0:9:5.28:5,0,79	0/0:9,0:11:2.74:0,3,12	./.	0/0:19,0:21:24.60:0,25,220	0/0:11,0:11:6.01:0,6,66	0/0:8,0:8:13.11:0,13,115	1/1:13,0:17:7.75:76,8,0	0/1:9,1:10:35.99:36,0,38	0/0:26,0:31:18.64:0,19,406	0/0:16,0:17:17.88:0,18,178	0/1:9,0:9:13.97:14,0,27	0/1:7,1:8:21.54:37,0,22	0/1:30,0:30:8.02:8,0,86	0/0:10,0:13:14.71:0,15,126	0/0:9,0:8:5.80:0,6,44	0/1:15,1:16:23.83:24,0,166	1/1:11,0:11:4.40:49,4,0	1/1:16,0:15:29.77:264,30,0	0/1:10,1:11:24.63:44,0,25	1/1:5,0:5:12.02:132,12,0
chr10	84275746	.	GGGGA	G	1453.72	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=7.620;DP=277;FS=5.189;HRun=0;HaplotypeScore=61.3771;InbreedingCoeff=0.9070;MQ=78.44;MQ0=1;MQRankSum=-3.969;QD=15.30;ReadPosRankSum=-5.849;VQSLOD=1.2717;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:12,3:15:26.85:214,27,0	0/0:5,0:5:8.97:0,9,92	0/0:18,0:12:8.89:0,9,124	0/0:21,0:20:46.52:0,47,671	0/0:10,0:10:16.48:0,16,168	0/0:6,0:6:9.02:0,9,156	1/1:15,0:15:25.55:229,26,0	1/1:11,0:11:32:236,32,0	0/0:10,0:10:26.40:0,26,519	0/0:8,0:8:12.50:0,12,163	0/0:6,0:6:12.03:0,12,216	0/0:10,0:10:20.95:0,21,343	0/0:9,0:9:27.08:0,27,523	0/0:7,0:7:15.05:0,15,238	1/1:7,3:10:26.38:168,26,0	0/0:13,0:13:35.27:0,35,473	0/0:15,0:15:35.83:0,36,652	0/0:9,0:9:17.98:0,18,222	1/1:5,0:5:14.86:109,15,0	1/1:3,0:3:2.38:19,2,0	./.	0/0:6,0:6:9.03:0,9,180	0/0:4,0:4:12:0,12,113	0/0:10,0:10:24.03:0,24,394	1/1:4,0:4:11.90:90,12,0	1/1:9,0:9:25.52:209,26,0	1/1:14,0:14:34.19:219,34,0	1/1:9,0:9:24.48:168,24,0
chr10	84275747	.	GGGA	G	1828.99	PASS	AB=0.517;AC=21;AF=0.375;AN=56;BaseQRankSum=8.251;DP=282;FS=8.695;HRun=0;HaplotypeScore=56.5957;InbreedingCoeff=0.8686;MQ=79.43;MQ0=1;MQRankSum=-1.976;QD=15.90;ReadPosRankSum=-5.401;VQSLOD=0.8675;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:29.45:226,29,0	0/0:5,0:5:8.97:0,9,79	0/0:16,0:10:1.58:0,2,78	0/0:22,0:21:28.94:0,29,533	0/0:10,0:10:19.75:0,20,161	0/0:6,0:6:9.02:0,9,131	1/1:15,0:15:37.36:286,37,0	1/1:10,1:11:32.92:306,33,0	0/0:10,0:10:26.12:0,26,414	0/0:9,0:9:15.50:0,15,168	0/0:6,0:6:12.03:0,12,179	0/0:9,0:9:17.26:0,17,270	0/0:9,0:9:27.08:0,27,424	0/0:9,0:9:20.99:0,21,228	1/1:10,0:10:26.67:179,27,0	0/0:13,0:13:34.81:0,35,391	0/0:16,0:16:41.13:0,41,578	0/0:8,0:8:17.66:0,18,182	1/1:0,5:5:14.97:136,15,0	1/1:0,3:3:2.71:19,3,0	0/1:1,14:15:0:0,0,0	0/0:5,0:5:9.02:0,9,143	0/0:4,0:4:11.99:0,12,99	0/0:10,0:10:23.24:0,23,303	1/1:4,0:4:11.90:91,12,0	1/1:10,0:10:29.93:250,30,0	1/1:13,1:14:35.77:291,36,0	1/1:11,0:11:32.83:252,33,0
chr10	84275749	.	GA	G	1963.60	PASS	AB=0.928;AC=26;AF=0.464;AN=56;BaseQRankSum=9.447;DP=301;FS=9.914;HRun=1;HaplotypeScore=50.2780;InbreedingCoeff=0.6851;MQ=78.40;MQ0=1;MQRankSum=-3.934;QD=11.16;ReadPosRankSum=-4.429;VQSLOD=-0.5557;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,5:21:40.08:276,40,0	0/0:5,0:5:8.87:0,9,60	0/0:15,0:9:4.13:0,4,74	0/1:21,1:21:8.29:8,0,264	0/0:11,0:11:19.71:0,20,147	0/0:9,0:9:14.97:0,15,133	1/1:18,0:18:47.27:372,47,0	1/1:14,0:14:41.68:321,42,0	0/0:10,0:10:24.81:0,25,235	0/0:9,1:10:18.48:0,18,164	0/0:7,0:7:15.01:0,15,144	0/1:8,1:9:2.94:3,0,124	0/0:10,0:10:29.88:0,30,260	0/0:8,1:9:20.89:0,21,166	1/1:10,0:10:26.24:180,26,0	0/0:14,0:14:13.50:0,13,228	0/0:15,0:15:41.63:0,42,364	0/1:8,0:8:1.73:2,0,108	1/1:5,0:5:14.90:112,15,0	1/1:3,0:3:2.97:20,3,0	1/1:15,0:15:0.47:1,0,0	0/0:5,0:5:8.96:0,9,82	0/0:5,0:5:14.97:0,15,121	0/1:10,2:12:5.03:5,0,196	1/1:4,0:4:11.90:91,12,0	1/1:10,0:10:29.93:252,30,0	1/1:14,0:14:35.71:268,36,0	1/1:11,0:11:32.83:253,33,0
chr10	84276932	.	G	GT	1065.34	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.467;DP=638;FS=10.576;HRun=2;HaplotypeScore=63.0502;InbreedingCoeff=0.9969;MQ=83.23;MQ0=0;MQRankSum=-0.741;QD=29.59;ReadPosRankSum=1.125;VQSLOD=2.0809;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,153,1880	0/0:8,0:8:24.02:0,24,266	0/0:20,0:20:60.18:0,60,728	0/0:28,0:28:49.38:0,49,694	0/0:17,0:17:51.16:0,51,631	0/0:12,0:12:30.08:0,30,358	0/0:33,0:33:96.28:0,96,1172	0/0:42,0:42:99:0,126,1540	0/0:13,0:13:39.12:0,39,482	0/0:12,0:12:36.11:0,36,446	0/0:21,0:21:60.19:0,60,744	0/0:33,0:33:93.24:0,93,1152	0/0:17,0:17:51.16:0,51,632	0/0:19,0:19:57.18:0,57,706	0/0:29,0:28:87.27:0,87,1077	0/0:27,0:27:75.22:0,75,916	0/0:25,0:25:72.23:0,72,892	0/0:21,0:21:60.19:0,60,744	0/0:23,0:23:69.21:0,69,844	0/0:18,0:18:54.15:0,54,654	0/0:40,0:40:99:0,117,1449	0/0:15,0:15:42.11:0,42,506	0/0:15,0:15:45.13:0,45,542	0/0:26,0:26:78.25:0,78,966	0/0:15,0:15:45.14:0,45,557	1/1:1,20:21:22.97:754,23,0	0/0:20,0:20:57.18:0,57,707	1/1:3,12:15:30.10:432,30,0
chr10	84277897	.	C	CAGAA	5816.90	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-10.043;DP=552;FS=0.437;HRun=0;HaplotypeScore=87.0908;InbreedingCoeff=0.9276;MQ=71.80;MQ0=1;MQRankSum=-2.555;QD=39.30;ReadPosRankSum=-2.199;VQSLOD=4.3825;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:57.19:0,57,946	0/0:12,0:12:33.09:0,33,499	0/0:24,0:21:25.11:0,25,315	0/1:17,0:15:3.69:4,0,271	0/0:26,0:26:57.16:0,57,904	0/0:17,0:17:42.14:0,42,699	1/1:0,24:24:57.20:1406,57,0	1/1:10,7:20:39.02:659,39,0	0/0:19,0:19:45.14:0,45,727	0/0:32,0:32:65.88:0,66,1022	0/0:21,0:21:45.15:0,45,749	0/0:20,0:20:51.16:0,51,805	0/0:17,0:17:45.13:0,45,703	0/0:15,0:15:33.10:0,33,528	0/0:22,0:22:51.16:0,51,826	0/0:19,0:19:51.17:0,51,833	0/0:25,0:25:72.19:0,72,1123	0/0:16,0:16:45.15:0,45,755	1/1:5,13:19:41.66:1003,42,0	1/1:8,12:21:42.10:964,42,0	1/1:4,11:16:27.09:666,27,0	0/0:12,0:12:27.04:0,27,422	0/0:19,0:19:45.13:0,45,706	0/0:15,0:15:39.09:0,39,621	0/0:23,0:23:45.14:0,45,725	0/0:15,0:14:39.13:0,39,651	1/1:11,20:30:47.95:1115,48,0	0/0:10,0:10:27.02:0,27,420
chr10	84280520	.	CAGT	C	1118.33	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.678;DP=449;FS=1.794;HRun=0;HaplotypeScore=80.6976;InbreedingCoeff=0.8588;MQ=89.72;MQ0=0;MQRankSum=-2.221;QD=41.42;ReadPosRankSum=1.174;VQSLOD=4.8965;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:66.23:1213,66,0	0/0:6,0:6:18.06:0,18,404	0/0:19,0:19:17.44:0,17,931	0/0:21,0:21:57.12:0,57,1147	0/0:8,0:8:24.08:0,24,565	0/0:18,0:18:54.19:0,54,1276	0/0:26,0:26:78.25:0,78,1797	0/0:15,0:15:45.15:0,45,1046	0/0:8,0:8:24.08:0,24,567	0/0:15,0:15:42.10:0,42,929	0/0:7,0:7:21.07:0,21,468	0/0:17,0:17:51.18:0,51,1207	0/0:10,0:10:30.10:0,30,707	0/0:15,0:15:45.15:0,45,1064	0/0:16,0:16:48.15:0,48,1089	0/0:7,0:7:21.07:0,21,496	0/0:23,0:23:69.24:0,69,1605	0/0:29,0:29:84.29:0,84,1956	0/0:13,0:13:39.13:0,39,896	0/0:3,0:3:9.03:0,9,213	0/0:57,0:57:99:0,172,4031	0/0:6,0:6:15.05:0,15,354	0/0:10,0:10:30.10:0,30,709	0/0:24,0:24:72.25:0,72,1704	0/0:19,0:19:57.17:0,57,1296	0/0:17,0:17:51.18:0,51,1206	0/0:9,0:9:27.09:0,27,631	0/0:4,0:4:9.03:0,9,209
chr10	84281098	.	TGGG	T	1289.36	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=3.016;DP=143;FS=9.550;HRun=4;HaplotypeScore=29.9116;InbreedingCoeff=0.7360;MQ=81.33;MQ0=0;MQRankSum=-4.017;QD=25.79;ReadPosRankSum=1.517;VQSLOD=-0.3905;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:24.08:0,24,564	0/0:2,0:2:3.01:0,3,71	0/0:5,0:5:9.02:0,9,132	0/0:4,0:3:9:0,9,158	0/0:5,0:5:12.04:0,12,284	0/0:4,0:4:12.04:0,12,284	1/1:2,12:14:27.09:460,27,0	1/1:1,6:7:12.04:212,12,0	0/0:3,0:3:6.02:0,6,142	0/0:5,0:5:15.05:0,15,355	0/0:2,0:2:6.02:0,6,142	0/0:2,0:2:6.02:0,6,142	0/0:1,0:1:3.01:0,3,71	0/0:3,0:3:9.03:0,9,213	0/0:4,0:4:12.04:0,12,284	0/0:3,0:3:9.03:0,9,213	0/0:11,0:11:33.11:0,33,780	0/0:4,0:4:12.04:0,12,283	1/1:0,6:6:18.02:259,18,0	1/1:0,2:2:3.01:53,3,0	1/1:2,14:16:12.87:262,13,0	0/0:4,0:4:12.04:0,12,285	./.	0/0:9,0:9:27.09:0,27,638	0/0:4,0:4:12.04:0,12,284	0/0:6,0:6:18.02:0,18,375	1/1:0,5:5:12.04:212,12,0	0/0:4,0:4:12.04:0,12,284
chr10	84281555	.	GTC	G	4632.57	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.829;DP=772;FS=2.681;HRun=0;HaplotypeScore=108.7111;InbreedingCoeff=0.9984;MQ=71.56;MQ0=10;MQRankSum=-1.320;QD=26.62;ReadPosRankSum=-1.589;VQSLOD=5.7427;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,8:17:18.04:222,18,0	0/0:13,0:13:36.12:0,36,606	0/0:55,0:32:62.50:0,63,818	0/0:82,2:41:34.99:0,35,456	0/0:22,0:22:66.22:0,66,1098	0/0:22,0:22:57.15:0,57,938	1/1:5,17:22:36.12:468,36,0	1/1:6,32:34:81.25:1037,81,0	0/0:28,0:28:78.25:0,78,1291	0/0:34,0:33:84.28:0,84,1384	0/0:22,0:22:57.19:0,57,956	0/0:23,0:23:51.16:0,51,817	0/0:20,0:20:60.14:0,60,962	0/0:19,0:19:57.19:0,57,957	0/0:31,0:31:69.24:0,69,1168	0/0:22,0:22:60.21:0,60,1012	0/0:36,0:36:90.31:0,90,1517	0/0:34,0:34:88.09:0,88,1557	1/1:3,16:19:48.14:610,48,0	1/1:0,20:20:54.09:680,54,0	1/1:3,30:33:61.39:1031,61,0	0/0:25,0:25:66.21:0,66,1092	0/0:21,0:21:57.18:0,57,928	0/0:27,0:27:68.26:0,68,1124	0/0:19,0:18:45.15:0,45,765	0/0:18,0:18:51.17:0,51,864	1/1:4,21:23:45.15:585,45,0	0/0:23,0:23:63.22:0,63,1072
chr10	84281568	.	TCTCTGC	T	68.85	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.126;DP=760;FS=5.130;HRun=0;HaplotypeScore=169.1931;InbreedingCoeff=0.9339;MQ=65.84;MQ0=15;MQRankSum=0.555;QD=5.74;ReadPosRankSum=-2.724;VQSLOD=2.1236;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,5:12:8.93:152,9,0	0/0:13,0:13:39.13:0,39,1131	0/0:53,0:26:34.75:0,35,929	0/0:75,0:30:22.63:0,23,276	0/0:25,0:25:72.24:0,72,2118	0/0:21,0:21:54.15:0,54,1776	0/0:20,0:20:48.08:0,48,896	0/0:34,0:30:81.27:0,81,1764	0/0:31,0:31:86.81:0,87,2484	0/0:31,0:31:78.19:0,78,2167	0/0:20,0:20:49.01:0,49,1300	0/0:19,0:19:51.16:0,51,1500	0/0:22,0:22:63.22:0,63,1879	0/0:21,0:21:60.13:0,60,1863	0/0:30,0:30:75.19:0,75,2133	0/0:21,0:21:57.11:0,57,1640	0/0:37,0:37:99:0,99,3021	0/0:38,0:38:28.10:0,28,2859	0/0:20,0:18:51.09:0,51,916	0/0:21,0:21:51.13:0,51,993	0/0:39,0:39:99:0,102,2033	0/0:25,0:25:69.22:0,69,2259	0/0:20,0:20:53.78:0,54,1367	0/0:27,1:28:42.94:0,43,2007	0/0:16,0:15:45.11:0,45,1176	0/0:20,0:20:57.17:0,57,1548	0/0:26,0:25:59.94:0,60,1321	0/0:21,0:21:63.12:0,63,1884
chr10	84281601	.	GTC	G	288.89	PASS	AB=0.929;AC=3;AF=0.054;AN=56;BaseQRankSum=4.324;DP=749;FS=2.131;HRun=0;HaplotypeScore=107.4180;InbreedingCoeff=0.5945;MQ=61.24;MQ0=18;MQRankSum=-0.373;QD=11.11;ReadPosRankSum=-0.861;VQSLOD=3.2785;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:0.65:0,1,2	0/1:12,1:13:5.08:5,0,451	0/0:52,0:15:18.79:0,19,206	0/0:92,0:30:3.01:0,3,199	0/0:21,0:21:48.15:0,48,764	0/0:22,0:22:54.18:0,54,896	0/0:23,0:23:48.16:0,48,796	0/0:30,0:29:60.20:0,60,982	0/0:29,0:29:72.08:0,72,1159	0/0:23,0:23:63.21:0,63,1019	0/0:12,0:12:27.09:0,27,430	0/0:19,1:20:18.99:0,19,862	0/0:27,0:27:72.25:0,72,1199	0/0:19,1:20:12.98:0,13,761	0/0:29,0:29:84.29:0,84,1401	0/0:19,0:19:53.90:0,54,821	0/0:38,0:38:93.26:0,93,1458	0/0:30,0:30:66.22:0,66,1054	0/0:21,0:21:54.13:0,54,843	0/0:14,0:14:39.13:0,39,645	0/0:42,0:42:83.45:0,83,1524	0/0:26,0:26:51.09:0,51,798	0/0:17,0:17:42.14:0,42,681	0/0:30,0:30:64.69:0,65,1050	1/1:2,11:12:30.10:382,30,0	0/0:28,0:28:69.21:0,69,1121	0/0:27,0:26:66.22:0,66,1062	0/0:17,0:17:42.14:0,42,678
chr10	84281641	.	GTC	G	449.92	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.825;DP=750;FS=0.934;HRun=0;HaplotypeScore=113.0035;InbreedingCoeff=0.8081;MQ=64.50;MQ0=12;MQRankSum=-3.697;QD=18.00;ReadPosRankSum=-2.502;VQSLOD=3.2769;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:41.87:545,42,0	0/0:9,0:9:20.85:0,21,329	0/0:62,0:19:34.09:0,34,447	0/0:101,0:30:5.07:0,5,189	0/0:18,0:18:48.16:0,48,815	0/0:24,0:24:57.18:0,57,938	0/0:22,0:22:45.14:0,45,764	0/0:23,0:23:57.19:0,57,946	0/0:27,0:27:72.25:0,72,1221	0/0:23,0:23:66.21:0,66,1073	0/0:12,0:12:30.09:0,30,479	0/0:25,0:25:66.19:0,66,1057	0/0:23,0:23:63.20:0,63,1039	0/0:19,0:19:45.10:0,45,704	0/0:34,0:34:69.20:0,69,1105	0/0:20,0:20:53.21:0,53,855	0/0:29,0:29:72.22:0,72,1187	0/0:28,0:28:68.24:0,68,1208	0/0:20,0:20:51.17:0,51,861	0/0:20,0:20:48.10:0,48,783	0/0:36,0:36:75.24:0,75,1243	0/0:18,0:18:45.15:0,45,763	0/0:17,0:17:36.12:0,36,611	0/0:37,0:37:90.25:0,90,1409	0/0:17,0:17:45.15:0,45,751	0/0:24,0:24:27.19:0,27,1031	0/0:30,0:29:60.20:0,60,996	0/0:6,0:6:6.02:0,6,102
chr10	84281699	.	G	GTCTC	2644.95	PASS	AB=0.800;AC=16;AF=0.286;AN=56;BaseQRankSum=1.785;DP=715;FS=4.421;HRun=0;HaplotypeScore=145.2653;InbreedingCoeff=0.8233;MQ=52.00;MQ0=28;MQRankSum=-2.897;QD=12.72;ReadPosRankSum=-2.157;VQSLOD=2.9417;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:38:43.45:193,43,0	0/0:8,0:8:17.11:0,17,297	0/0:55,0:16:26.99:0,27,423	0/0:65,0:18:26.58:0,27,422	0/0:18,0:18:26.76:0,27,433	0/0:25,0:25:56.64:0,57,916	1/1:17,4:21:14.62:377,15,0	1/1:15,13:25:39.55:751,40,0	0/0:24,0:24:65.46:0,65,1084	0/0:25,0:25:56.66:0,57,862	0/0:16,0:16:36.08:0,36,586	0/0:20,0:20:38.07:0,38,613	0/0:18,0:18:34.53:0,35,494	0/0:21,0:21:47.81:0,48,716	1/1:13,13:26:2.97:35,3,0	0/0:19,0:19:7.02:0,7,522	0/0:24,0:24:33.67:0,34,755	0/0:33,0:33:50.07:0,50,965	1/1:4,7:11:27.04:476,27,0	1/1:23,1:24:21.02:345,21,0	0/1:7,14:21:0:0,0,0	0/0:43,0:42:7.20:0,7,1202	0/0:20,0:19:44.82:0,45,730	0/0:47,0:47:99:0,108,1723	0/1:20,0:20:10.82:63,0,11	0/0:15,0:15:33.08:0,33,501	1/1:13,5:18:27.07:595,27,0	0/0:10,0:10:15.04:0,15,224
chr10	84281712	.	TACA	T	316.46	PASS	AB=0.819;AC=11;AF=0.204;AN=54;BaseQRankSum=8.789;DP=672;FS=2.866;HRun=0;HaplotypeScore=132.5535;InbreedingCoeff=0.6116;MQ=53.23;MQ0=29;MQRankSum=-0.422;QD=2.26;ReadPosRankSum=-0.313;VQSLOD=2.0096;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:34:5.97:6,0,18	0/0:12,0:11:29.51:0,30,466	0/0:33,0:12:27.08:0,27,349	0/0:37,0:15:24.61:0,25,340	0/0:18,0:19:41.83:0,42,735	0/0:28,0:29:65.22:0,65,1022	1/1:14,3:20:10.85:30,11,0	0/0:20,0:19:26.56:0,27,412	0/0:29,0:31:85.39:0,85,1490	0/0:28,0:29:87.19:0,87,1377	0/0:18,0:18:44.88:0,45,689	0/0:20,0:21:56.80:0,57,1028	0/0:18,0:18:40.47:0,40,588	0/0:18,0:19:56.55:0,57,901	1/1:13,0:21:2.86:35,3,0	0/0:24,0:24:47.94:0,48,1063	0/0:26,0:26:69.95:0,70,1223	0/0:26,0:27:62.52:0,63,1206	0/1:6,1:8:46.93:47,0,122	1/1:11,2:20:17.11:109,17,0	./.	0/0:44,0:43:99:0,102,1826	0/0:23,0:23:48.02:0,48,935	0/0:47,0:47:99:0,120,2108	0/1:16,4:21:46.24:72,0,46	0/0:14,0:20:51.15:0,51,846	1/1:9,2:16:26.81:175,27,0	0/0:5,0:11:15.05:0,15,249
chr10	84281718	.	C	CT	32.27	PASS	AB=0.912;AC=8;AF=0.143;AN=56;BaseQRankSum=3.340;DP=662;FS=10.698;HRun=0;HaplotypeScore=114.8525;InbreedingCoeff=0.2279;MQ=52.51;MQ0=34;MQRankSum=-1.131;QD=0.26;ReadPosRankSum=-1.007;VQSLOD=1.6786;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:0.21:0,0,401	0/0:13,0:12:33:0,33,387	0/0:26,0:7:16.24:0,16,188	0/0:27,0:10:19.30:0,19,236	0/0:18,0:18:38.97:0,39,492	0/0:30,0:30:63.07:0,63,816	0/1:19,3:23:15.53:70,0,16	0/0:20,0:19:51.11:0,51,632	0/0:34,0:33:85.05:0,85,1085	0/0:27,0:27:81.17:0,81,1037	0/0:18,0:18:45.04:0,45,578	0/0:21,0:21:50.69:0,51,654	0/0:22,0:22:51.05:0,51,622	0/0:19,0:19:57.12:0,57,752	1/1:21,0:21:0.05:1,0,0	0/0:22,0:22:54.17:0,54,736	0/0:27,0:27:72.61:0,73,939	0/0:27,0:26:75.51:0,76,945	0/1:7,1:8:22.89:23,0,180	0/0:17,1:19:5.58:0,6,49	1/1:20,1:18:2.99:24,3,0	0/0:42,0:41:96.31:0,96,1319	0/0:25,0:23:56.66:0,57,714	0/0:50,0:49:99:0,117,1562	0/0:21,0:21:39.04:0,39,382	0/0:21,0:20:51.04:0,51,609	0/1:11,2:14:25.17:25,0,60	0/0:11,0:10:12:0,12,144
chr10	84283548	.	T	TA	808.30	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.121;DP=687;FS=4.792;HRun=9;HaplotypeScore=66.0827;InbreedingCoeff=0.9990;MQ=75.29;MQ0=1;MQRankSum=-2.291;QD=19.71;ReadPosRankSum=1.167;VQSLOD=4.1413;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,35:41:61.19:903,61,0	0/0:12,0:12:29.99:0,30,260	0/0:24,0:22:48.11:0,48,387	0/0:22,0:20:32:0,32,262	0/0:28,0:28:77.91:0,78,666	0/0:24,0:24:62.97:0,63,544	0/0:21,0:21:56.97:0,57,493	0/0:30,0:30:62.83:0,63,534	0/0:35,0:35:99:0,102,885	0/0:21,0:21:56.95:0,57,490	0/0:22,0:22:62.98:0,63,545	0/0:26,0:26:62.95:0,63,542	0/0:29,0:30:76.97:0,77,646	0/0:26,0:27:76.98:0,77,649	0/0:33,0:33:89.94:0,90,771	0/0:26,0:26:56.97:0,57,495	0/0:25,0:25:68.97:0,69,596	0/0:17,0:17:44.97:0,45,385	0/0:17,0:17:38.99:0,39,339	0/0:30,0:30:86.94:0,87,747	0/0:27,0:27:62.92:0,63,537	0/0:26,0:26:68.95:0,69,595	0/0:16,0:16:44.98:0,45,391	0/0:21,0:21:53.95:0,54,461	0/0:14,0:14:41.99:0,42,365	0/0:28,0:28:77.98:0,78,677	0/0:27,0:27:68.93:0,69,592	0/0:16,0:16:47.99:0,48,417
chr10	84283936	.	AC	A	678.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.257;DP=743;FS=1.624;HRun=6;HaplotypeScore=103.0517;InbreedingCoeff=0.9995;MQ=88.25;MQ0=0;MQRankSum=-2.438;QD=24.23;ReadPosRankSum=0.089;VQSLOD=2.7778;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,132,1691	0/0:16,0:16:45.15:0,45,592	0/0:30,0:30:61.38:0,61,751	0/0:24,0:24:52.77:0,53,631	0/0:22,0:22:54.18:0,54,708	0/0:13,0:13:36.12:0,36,473	0/0:39,0:39:99:0,111,1407	0/0:26,0:26:66.21:0,66,867	0/0:27,0:27:78.24:0,78,1009	0/0:33,0:33:96.30:0,96,1232	0/0:17,0:17:40.01:0,40,513	0/0:33,0:33:93.27:0,93,1203	0/0:29,0:29:87.26:0,87,1118	0/0:27,0:27:81.25:0,81,1050	1/1:3,25:28:72.18:773,72,0	0/0:26,0:26:72.23:0,72,934	0/0:35,0:35:99:0,99,1301	0/0:23,0:23:66.16:0,66,834	0/0:19,0:19:51.17:0,51,671	0/0:20,0:20:57.19:0,57,746	0/0:65,0:65:99:0,187,2415	0/0:21,0:21:57.18:0,57,738	0/0:19,0:19:57.19:0,57,750	0/0:30,0:30:78.20:0,78,993	0/0:14,0:14:36.11:0,36,457	0/0:24,0:24:69.19:0,69,868	0/0:13,0:13:36.12:0,36,471	0/0:18,0:18:54.18:0,54,708
chr10	84284698	.	AAAGT	A	6916.88	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.666;DP=515;FS=0.000;HRun=0;HaplotypeScore=85.9725;InbreedingCoeff=0.9992;MQ=68.04;MQ0=1;MQRankSum=-4.794;QD=48.03;ReadPosRankSum=0.301;VQSLOD=5.1851;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.31:0,96,2526	0/0:8,0:8:24.08:0,24,604	0/0:18,0:17:48.16:0,48,1209	0/0:21,0:21:54.63:0,55,1349	0/0:15,0:15:45.14:0,45,1163	0/0:12,0:12:36.12:0,36,985	1/1:0,26:26:78.27:1489,78,0	1/1:0,15:15:45.14:838,45,0	0/0:11,0:11:33.11:0,33,858	0/0:32,0:32:93.32:0,93,2419	0/0:11,0:11:30.09:0,30,761	0/0:18,0:18:54.18:0,54,1433	0/0:20,0:20:60.21:0,60,1587	0/0:20,0:20:57.20:0,57,1558	1/1:0,25:23:57.15:1066,57,0	0/0:12,0:12:33.11:0,33,862	0/0:21,0:21:63.22:0,63,1726	0/0:30,0:30:78.27:0,78,2116	1/1:1,15:16:45.15:829,45,0	1/1:0,18:18:39.09:718,39,0	1/1:1,26:27:60.21:1163,60,0	0/0:11,0:11:30.10:0,30,821	0/0:21,0:21:63.22:0,63,1685	0/0:16,0:16:45.15:0,45,1199	0/0:13,0:13:39.13:0,39,1057	0/0:18,0:18:54.19:0,54,1478	1/1:1,16:17:42.14:814,42,0	0/0:10,0:10:30.10:0,30,793
chr10	84285393	.	T	TAA	2367.56	PASS	AB=0.927;AC=47;AF=0.904;AN=52;BaseQRankSum=-5.272;DP=153;FS=3.387;HRun=3;HaplotypeScore=215.0996;InbreedingCoeff=-0.0539;MQ=31.33;MQ0=0;MQRankSum=2.277;QD=15.47;ReadPosRankSum=-2.397;VQSLOD=-0.0876;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:0.94:53,1,0	1/1:3,0:3:6:54,6,0	./.	./.	1/1:7,0:6:10.43:98,10,0	1/1:10,1:10:12.65:124,13,0	1/1:3,0:3:3.01:48,3,0	1/1:10,0:8:17.99:168,18,0	1/1:6,0:6:6.98:156,7,0	1/1:9,0:9:10.10:160,10,0	1/1:9,0:8:10.04:144,10,0	1/1:3,0:3:5.97:46,6,0	1/1:1,0:1:0.89:2,1,0	1/1:4,0:4:5.69:53,6,0	1/1:3,2:5:7.61:96,8,0	1/1:6,1:7:12.03:137,12,0	0/1:5,0:5:2.30:47,0,2	1/1:7,0:7:15.01:151,15,0	1/1:4,1:5:10.04:83,10,0	1/1:6,0:6:13.37:123,13,0	0/1:2,0:2:1.29:23,0,1	0/1:6,0:6:1.76:70,0,2	1/1:3,0:3:9.01:82,9,0	0/1:5,0:5:0.22:33,0,0	0/1:3,4:7:16.51:41,0,17	1/1:5,0:5:12.90:117,13,0	1/1:8,0:8:21.05:219,21,0	1/1:6,0:6:12.03:130,12,0
chr10	84285820	.	ATC	A	1312.13	PASS	AB=0.914;AC=13;AF=0.232;AN=56;BaseQRankSum=3.333;DP=677;FS=1.990;HRun=0;HaplotypeScore=107.9187;InbreedingCoeff=0.5030;MQ=69.85;MQ0=28;MQRankSum=1.181;QD=9.87;ReadPosRankSum=2.038;VQSLOD=3.4151;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:26:8.47:0,8,59	1/1:3,5:6:6.02:68,6,0	0/0:73,0:25:7.20:0,7,65	0/0:88,0:30:10.88:0,11,72	0/1:17,6:22:45.91:46,0,254	0/1:15,0:15:38.95:39,0,294	0/0:27,0:25:7.72:0,8,70	0/0:39,0:37:41.31:0,41,398	0/1:18,1:19:1.88:2,0,433	1/1:8,11:19:32.93:363,33,0	1/1:5,7:11:12.04:140,12,0	0/0:21,0:21:33.09:0,33,470	0/0:14,0:15:22.82:0,23,452	0/0:17,0:16:36.08:0,36,482	0/0:14,0:26:11.97:0,12,98	1/1:3,9:13:23.74:238,24,0	1/1:13,10:23:51.13:581,51,0	0/0:21,1:23:7.99:0,8,715	0/0:19,0:19:2.68:0,3,124	0/0:10,0:20:3.82:0,4,22	0/0:12,0:12:0.94:0,1,1	0/0:18,0:18:26.91:0,27,360	0/0:14,0:14:17.47:0,17,245	0/0:25,0:24:23.09:0,23,653	0/0:29,0:28:1.48:0,1,21	0/0:14,0:14:27.08:0,27,384	0/0:13,0:13:7.37:0,7,66	0/0:19,0:16:0.40:0,0,248
chr10	84285907	.	AACAC	A	797.23	PASS	AB=0.806;AC=11;AF=0.212;AN=52;BaseQRankSum=2.156;DP=549;FS=2.916;HRun=0;HaplotypeScore=113.6816;InbreedingCoeff=0.6574;MQ=60.05;MQ0=16;MQRankSum=0.759;QD=8.39;ReadPosRankSum=0.135;VQSLOD=2.9278;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:31:15.02:0,15,242	1/1:4,2:6:2.75:46,3,0	./.	./.	0/0:16,0:16:9.03:0,9,208	0/0:14,0:25:20.08:0,20,286	0/0:17,0:28:38.65:0,39,742	0/0:16,0:15:3.01:0,3,57	0/0:16,2:18:18.01:0,18,321	1/1:13,1:16:9.02:121,9,0	1/1:8,1:9:3.48:47,3,0	0/1:19,1:24:40.16:40,0,437	0/0:15,0:15:14.86:0,15,230	0/0:13,0:13:12.02:0,12,215	0/0:20,0:22:30.08:0,30,556	1/1:4,4:7:6.02:93,6,0	1/1:14,13:30:30.49:598,30,0	0/0:16,0:18:31.85:0,32,517	0/0:10,0:10:12.02:0,12,198	0/0:18,0:18:14.79:0,15,307	0/0:23,0:19:36.11:0,36,701	0/0:12,0:13:24.08:0,24,524	0/0:9,0:9:15.05:0,15,320	0/0:45,0:45:67.10:0,67,1328	0/0:13,0:13:12.03:0,12,225	0/0:16,0:17:25.33:0,25,451	0/0:10,0:18:14.99:0,15,175	0/0:4,0:4:6.02:0,6,101
chr10	84286885	.	G	GC	5567.10	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-8.411;DP=635;FS=2.493;HRun=5;HaplotypeScore=69.6775;InbreedingCoeff=0.8996;MQ=71.03;MQ0=0;MQRankSum=0.958;QD=31.81;ReadPosRankSum=-1.823;VQSLOD=4.8066;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.23:0,93,998	0/0:6,0:6:15.04:0,15,161	0/1:6,0:6:10.92:11,0,58	0/0:13,0:12:13.40:0,13,164	0/0:23,0:23:63.05:0,63,660	0/0:19,0:19:54.07:0,54,566	1/1:5,28:33:81.26:1056,81,0	1/1:3,20:23:57.11:674,57,0	0/0:25,0:25:69.17:0,69,741	0/0:29,0:29:78:0,78,808	0/0:13,0:13:32.87:0,33,335	0/0:24,0:24:66.17:0,66,709	0/0:23,0:23:57.12:0,57,604	0/0:32,0:32:78.18:0,78,832	0/0:24,0:24:63.16:0,63,677	0/0:17,0:17:48.11:0,48,508	0/0:40,0:40:99:0,111,1180	0/0:22,0:22:63.04:0,63,642	1/1:1,24:25:66.16:816,66,0	1/1:0,21:21:59.98:761,60,0	1/1:2,42:43:99:1460,111,0	0/0:13,0:13:30.95:0,31,318	0/0:11,0:11:28.25:0,28,279	0/0:45,0:45:99:0,120,1254	0/0:16,0:16:41.71:0,42,413	0/0:20,0:20:44.93:0,45,447	1/1:0,23:23:60.20:789,60,0	0/0:12,0:12:36.08:0,36,379
chr10	84287194	.	C	CCAA	813.41	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-3.684;DP=262;FS=18.395;HRun=0;HaplotypeScore=40.7215;InbreedingCoeff=0.8406;MQ=85.65;MQ0=0;MQRankSum=-2.819;QD=40.67;ReadPosRankSum=-0.327;VQSLOD=2.0852;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:30.10:0,30,488	0/0:3,0:3:9.03:0,9,142	0/0:7,0:7:15.05:0,15,241	0/0:11,0:11:24.71:0,25,370	0/0:6,0:6:15.04:0,15,220	0/0:5,0:5:12.04:0,12,195	0/0:25,0:25:69.22:0,69,1092	0/0:12,0:12:33.11:0,33,533	0/0:8,0:8:24.08:0,24,384	0/0:2,0:2:6.02:0,6,93	0/0:4,0:4:9.03:0,9,146	0/0:6,0:6:18.06:0,18,283	0/0:8,0:8:24.08:0,24,376	0/0:8,0:8:24.07:0,24,359	1/1:0,6:6:18.06:398,18,0	0/0:8,0:8:24.08:0,24,386	0/0:16,0:16:42.14:0,42,683	0/0:26,0:26:72.22:0,72,1136	0/0:8,0:8:18.02:0,18,263	0/0:7,0:7:21.04:0,21,292	0/0:29,0:29:78.27:0,78,1252	0/0:4,0:4:12.04:0,12,195	0/0:4,0:4:12.04:0,12,195	0/0:18,0:18:54.18:0,54,870	1/1:3,2:5:6.02:133,6,0	1/1:1,3:4:9.03:199,9,0	0/0:5,0:5:15.05:0,15,244	1/1:1,2:5:12.04:228,12,0
chr10	84288249	.	GA	G	303.67	PASS	AB=0.925;AC=7;AF=0.125;AN=56;BaseQRankSum=3.187;DP=591;FS=6.136;HRun=13;HaplotypeScore=96.1347;InbreedingCoeff=0.2121;MQ=53.55;MQ0=8;MQRankSum=0.713;QD=2.39;ReadPosRankSum=2.868;VQSLOD=-0.0420;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,26:34:51.76:362,52,0	0/0:6,0:6:15:0,15,133	0/0:19,0:5:6:0,6,52	0/0:20,1:8:8.06:0,8,43	0/0:14,0:14:27.04:0,27,262	0/0:17,0:17:35.99:0,36,330	0/0:20,0:21:22.97:0,23,153	0/0:23,0:24:11.78:0,12,119	0/0:21,0:20:48.05:0,48,452	0/0:37,0:36:31.69:0,32,517	0/0:15,0:15:32.89:0,33,306	0/1:22,2:24:5.13:5,0,280	0/0:22,0:23:31.75:0,32,331	0/0:19,1:20:19.96:0,20,326	0/0:6,0:18:31.47:0,31,177	0/0:15,0:17:29.88:0,30,272	0/0:27,0:29:59.71:0,60,539	0/1:19,4:23:21.67:22,0,422	0/0:21,0:24:45.26:0,45,261	0/0:13,0:13:8.80:0,9,63	0/1:13,0:14:1.46:1,0,58	0/1:19,4:23:31.15:31,0,324	0/0:18,0:18:30.05:0,30,292	0/0:31,2:34:13.93:0,14,592	0/0:23,1:26:30.15:0,30,208	0/0:19,0:25:17.62:0,18,175	0/0:16,0:16:22.45:0,22,112	0/1:9,0:7:1.71:2,0,40
chr10	84288256	.	A	AAAAAAAAG	5601.56	PASS	AB=0.906;AC=16;AF=0.286;AN=56;BaseQRankSum=5.635;DP=594;FS=3.050;HRun=0;HaplotypeScore=169.7724;InbreedingCoeff=0.6401;MQ=57.93;MQ0=5;MQRankSum=-9.854;QD=27.46;ReadPosRankSum=-3.911;VQSLOD=4.0542;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:62.38:0,62,950	0/0:7,0:7:20.99:0,21,233	0/0:21,0:9:14.97:0,15,126	0/0:21,0:12:12.36:0,12,140	0/0:14,0:14:39.03:0,39,688	0/0:19,0:19:39.01:0,39,702	0/1:11,8:28:17.53:460,0,18	1/1:16,0:26:39.08:1003,39,0	0/0:20,0:19:54.12:0,54,1028	0/0:31,0:31:56.30:0,56,1144	0/0:16,0:15:42.10:0,42,777	0/0:22,0:22:36.71:0,37,772	0/0:23,0:23:44.93:0,45,885	0/0:18,0:17:47.95:0,48,839	0/1:18,0:18:36.31:36,0,178	0/0:12,0:12:30.10:0,30,635	0/0:29,0:29:34.17:0,34,1084	0/0:25,0:25:69.12:0,69,1259	1/1:15,5:27:39.03:1197,39,0	1/1:4,7:17:13.53:235,14,0	1/1:11,0:11:26.69:431,27,0	0/0:26,0:26:65.99:0,66,1114	0/0:17,0:17:42.08:0,42,752	0/0:33,0:33:93.15:0,93,1710	1/1:22,0:22:18.25:1163,18,0	0/1:22,0:22:89.62:267,0,90	1/1:1,10:20:20.81:790,21,0	0/1:10,0:8:18.52:19,0,19
chr10	84289335	.	T	TGGGAG	5430.27	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.792;DP=424;FS=19.720;HRun=0;HaplotypeScore=92.5895;InbreedingCoeff=0.9662;MQ=84.43;MQ0=0;MQRankSum=-10.351;QD=89.02;ReadPosRankSum=-0.297;VQSLOD=5.1211;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,2208	0/0:6,0:6:18.06:0,18,419	0/0:17,0:17:42.14:0,42,938	0/0:29,0:28:56.15:0,56,1493	0/0:19,0:19:57.20:0,57,1306	0/0:19,0:19:45.15:0,45,1049	1/1:1,10:11:31.35:998,31,0	1/1:0,4:4:12.04:394,12,0	0/0:16,0:16:48.15:0,48,1055	0/0:11,0:11:33.11:0,33,769	0/0:9,0:9:27.09:0,27,612	0/0:32,0:32:90.31:0,90,2071	0/0:16,0:16:45.15:0,45,1047	0/0:15,0:15:42.14:0,42,926	0/0:17,0:17:48.16:0,48,1117	0/0:14,0:14:42.14:0,42,979	0/0:24,0:24:72.25:0,72,1650	0/0:18,0:18:54.19:0,54,1229	1/1:0,2:2:6.02:198,6,0	1/1:0,9:9:27.09:891,27,0	1/1:0,11:13:24.55:796,25,0	0/0:12,0:12:36.11:0,36,790	0/0:10,0:10:30.10:0,30,699	0/0:26,0:26:75.22:0,75,1574	1/1:0,7:7:21.07:697,21,0	0/0:12,0:12:36.11:0,36,795	1/1:0,14:15:45.15:1457,45,0	0/0:4,0:4:12.04:0,12,279
chr10	84290816	.	A	AGCCTGTG	8695.18	PASS	AB=0.530;AC=11;AF=0.196;AN=56;BaseQRankSum=-0.746;DP=699;FS=8.102;HRun=0;HaplotypeScore=169.4696;InbreedingCoeff=0.8836;MQ=73.26;MQ0=0;MQRankSum=-13.495;QD=69.01;ReadPosRankSum=0.088;VQSLOD=4.2904;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,11:24:30.10:819,30,0	0/0:8,0:8:24.08:0,24,589	0/0:16,0:16:24.10:0,24,696	0/0:13,0:13:29.67:0,30,606	0/0:19,0:19:54.19:0,54,1401	0/0:23,0:23:63.20:0,63,1551	0/0:37,0:37:99:0,105,2602	0/0:25,0:25:75.25:0,75,1852	1/1:1,16:20:45.15:1764,45,0	0/0:20,0:20:60.20:0,60,1488	0/0:11,0:11:30.09:0,30,687	0/0:40,0:40:99:0,111,2624	0/0:29,0:29:81.25:0,81,1996	0/0:30,0:30:90.23:0,90,2006	1/1:4,16:24:48.16:1900,48,0	0/0:33,0:33:99:0,99,2440	0/0:19,0:19:57.18:0,57,1369	0/0:34,0:34:96.28:0,96,2343	0/0:26,0:26:75.19:0,75,1654	0/0:14,0:14:42.13:0,42,1000	0/0:91,0:91:99:0,256,6206	0/0:17,0:17:45.14:0,45,1054	0/0:11,0:11:30.08:0,30,673	0/0:33,0:33:99:0,99,2474	1/1:3,7:13:18.06:690,18,0	0/1:4,22:35:99:2603,0,155	0/0:24,0:24:69.24:0,69,1782	1/1:6,4:10:30.08:920,30,0
chr10	84292326	.	AGG	A	1461.55	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=3.314;DP=268;FS=7.880;HRun=10;HaplotypeScore=54.6199;InbreedingCoeff=0.8328;MQ=78.81;MQ0=2;MQRankSum=1.161;QD=17.61;ReadPosRankSum=4.477;VQSLOD=1.4405;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:16:35.20:0,35,423	1/1:1,4:5:9.02:100,9,0	0/0:9,0:9:12.49:0,12,124	0/0:11,0:10:5.12:0,5,158	0/0:5,0:5:2.97:0,3,20	0/0:4,0:4:8.99:0,9,115	0/0:16,0:16:39.06:0,39,479	0/0:8,0:8:8.48:0,8,57	0/0:8,0:9:20.28:0,20,223	1/1:1,13:14:36.08:394,36,0	1/1:1,6:7:12.02:130,12,0	0/0:8,0:9:11.47:0,11,102	0/0:13,0:13:32.94:0,33,399	0/0:5,0:5:12.04:0,12,183	1/1:2,0:10:10.97:48,11,0	1/1:1,4:5:3.01:33,3,0	1/1:4,14:17:27.06:301,27,0	0/0:17,0:17:41.82:0,42,509	0/0:3,0:3:9.02:0,9,121	0/0:5,0:5:6.02:0,6,95	0/0:12,0:13:17.52:0,18,203	0/0:8,0:8:14.38:0,14,119	0/0:5,0:5:12.46:0,12,141	0/0:22,0:22:51.06:0,51,639	1/1:0,9:9:24.01:253,24,0	1/1:1,8:9:24.06:267,24,0	0/0:7,0:7:15.01:0,15,189	1/1:0,6:6:12.03:134,12,0
chr10	84292924	.	ATGCG	A	457.12	PASS	AB=0.868;AC=16;AF=0.308;AN=52;BaseQRankSum=6.287;DP=476;FS=16.106;HRun=0;HaplotypeScore=67.1482;InbreedingCoeff=-0.0571;MQ=35.57;MQ0=6;MQRankSum=-1.805;QD=1.75;ReadPosRankSum=0.224;VQSLOD=-0.5348;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:8,0:8:6.49:111,6,0	0/0:10,0:1:3.01:0,3,35	0/0:13,0:5:11.62:0,12,168	0/0:11,0:11:3.01:0,3,68	0/1:13,0:13:0:0,0,0	0/1:9,2:11:0.40:1,0,0	0/1:15,2:18:94.21:160,0,94	0/0:23,0:23:7.20:0,7,215	0/1:31,2:32:86.66:87,0,1256	./.	0/1:35,0:36:7.52:8,0,901	0/0:16,0:16:1.61:0,2,95	0/0:23,0:23:26.73:0,27,497	0/1:22,1:23:11.94:56,0,12	0/0:11,1:12:0.44:0,0,20	0/1:2,4:6:25.24:46,0,25	0/0:19,0:18:33.97:0,34,701	0/1:9,2:9:51.93:81,0,52	0/1:13,3:16:0:0,0,0	0/1:14,17:30:0.01:0,0,0	1/1:19,0:19:0.47:1,0,0	0/0:13,0:13:2.68:0,3,85	0/0:16,0:16:3.01:0,3,87	0/0:20,1:21:0.89:0,1,9	0/1:26,0:26:23.71:24,0,1133	0/1:9,1:10:0.02:0,0,57	0/0:6,0:6:4.14:0,4,167
chr10	84292928	.	G	GCA	202.19	PASS	AB=0.950;AC=21;AF=0.420;AN=50;BaseQRankSum=2.888;DP=528;FS=10.947;HRun=0;HaplotypeScore=80.6765;InbreedingCoeff=0.3685;MQ=33.98;MQ0=8;MQRankSum=-2.903;QD=0.84;ReadPosRankSum=-3.918;VQSLOD=-0.4425;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:23:3:25,3,0	0/0:8,0:8:0.74:0,1,2	./.	0/0:13,0:5:0:0,0,0	0/0:14,0:14:3.01:0,3,33	0/1:14,0:14:0:0,0,0	0/1:16,0:16:5.97:35,0,6	1/1:19,0:19:5.14:25,5,0	0/0:27,1:26:12.01:0,12,124	1/1:35,0:33:2.80:13,3,0	./.	0/0:37,0:38:22.08:0,22,462	0/1:12,5:18:36.91:116,0,37	0/0:23,0:25:26.69:0,27,255	1/1:22,0:23:4.99:25,5,0	1/1:11,0:16:2.50:12,3,0	0/0:7,0:7:0.89:0,1,2	0/0:20,0:19:13.97:0,14,148	1/1:13,0:11:4.30:21,4,0	0/1:16,0:16:0:0,0,0	./.	0/0:16,5:22:2.98:0,3,21	0/0:13,0:13:3.01:0,3,33	0/0:18,0:19:2.88:0,3,33	0/0:22,0:22:2.50:0,3,15	1/1:30,0:30:7.23:51,7,0	0/1:10,0:10:0:0,0,0	1/1:4,0:6:2.74:12,3,0
chr10	84293214	.	A	AGT	14880.51	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-18.944;DP=800;FS=0.274;HRun=0;HaplotypeScore=87.2228;InbreedingCoeff=0.9993;MQ=86.29;MQ0=2;MQRankSum=-0.135;QD=48.47;ReadPosRankSum=0.398;VQSLOD=5.4618;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,59:60:99:3090,166,0	0/0:7,0:7:21.07:0,21,309	0/0:33,0:33:84.79:0,85,1285	0/0:28,0:28:57.19:0,57,816	0/0:22,0:22:60.20:0,60,882	0/0:26,0:26:75.24:0,75,1084	1/1:1,36:37:99:1854,99,0	1/1:0,33:33:99:1803,99,0	0/0:21,0:21:60.20:0,60,880	0/0:39,0:39:99:0,111,1613	0/0:13,0:12:33.11:0,33,484	0/0:35,0:35:99:0,105,1544	0/0:23,0:23:69.22:0,69,994	0/0:40,0:40:99:0,111,1634	1/1:1,33:34:75.26:1405,75,0	0/0:30,0:30:84.28:0,84,1236	0/0:31,0:31:90.30:0,90,1323	0/0:16,0:16:48.16:0,48,700	1/1:3,17:21:57.19:1038,57,0	1/1:0,18:18:45.15:821,45,0	1/1:3,52:53:99:2584,138,0	0/0:26,0:26:78.23:0,78,1122	0/0:17,0:17:48.16:0,48,705	0/0:36,0:36:99:0,108,1577	1/1:2,24:26:69.24:1273,69,0	0/0:36,0:36:99:0,105,1524	1/1:1,22:23:54.19:1011,54,0	0/0:14,0:14:42.06:0,42,571
chr10	84295243	.	CAT	C	2112.72	PASS	AB=0.914;AC=17;AF=0.304;AN=56;BaseQRankSum=4.608;DP=628;FS=24.255;HRun=0;HaplotypeScore=88.6959;InbreedingCoeff=0.1151;MQ=54.04;MQ0=44;MQRankSum=-1.668;QD=8.09;ReadPosRankSum=-5.006;VQSLOD=0.7916;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:42,2:43:36.14:0,36,1032	0/0:13,0:13:22.04:0,22,391	0/1:44,0:9:9.42:9,0,215	0/0:55,0:12:7.65:0,8,263	0/0:18,0:18:23.04:0,23,531	0/0:20,1:21:1.83:0,2,644	0/1:20,2:22:27.66:616,0,28	0/1:4,10:13:29.28:378,0,29	0/1:12,1:12:19.99:20,0,398	0/1:30,1:31:99:149,0,837	0/1:13,1:13:79.43:79,0,243	0/0:21,0:21:44.88:0,45,721	0/1:25,0:24:24.09:24,0,716	0/0:20,4:24:43:0,43,762	0/1:16,1:16:81.89:82,0,479	0/0:22,0:22:33.02:0,33,466	0/0:24,0:23:24.18:0,24,530	0/0:16,1:17:30.62:0,31,648	0/1:18,1:17:17.84:419,0,18	1/1:3,11:13:2.66:34,3,0	1/1:1,17:18:0.47:1,0,0	0/0:20,1:21:17.37:0,17,749	0/0:16,1:17:18.39:0,18,513	0/0:26,0:26:25.20:0,25,872	1/1:6,2:8:15.05:226,15,0	0/0:24,0:23:63.10:0,63,974	1/1:2,20:22:21.71:239,22,0	0/0:17,2:18:45.82:0,46,718
chr10	84295253	.	CAT	C	104.68	PASS	AB=0.963;AC=5;AF=0.089;AN=56;BaseQRankSum=7.593;DP=646;FS=29.196;HRun=0;HaplotypeScore=95.9187;InbreedingCoeff=0.2585;MQ=59.76;MQ0=42;MQRankSum=-1.448;QD=1.66;ReadPosRankSum=-3.297;VQSLOD=-0.4053;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:47.92:0,48,1623	0/0:13,0:13:30.10:0,30,571	0/0:54,0:19:48.69:0,49,896	0/0:63,0:18:19.22:0,19,603	0/0:21,0:21:40.49:0,40,824	0/0:21,0:21:46.18:0,46,1045	0/1:18,1:19:51.09:51,0,483	0/0:19,0:18:54.18:0,54,875	0/0:13,1:13:15.63:0,16,641	0/0:26,1:27:33.77:0,34,1265	0/1:14,1:14:10.18:10,0,523	0/0:20,0:20:45.15:0,45,867	0/0:22,0:21:11.37:0,11,938	0/0:21,0:21:57.20:0,57,1090	0/0:22,0:21:41.35:0,41,1016	0/0:23,0:23:36.08:0,36,712	0/0:23,0:22:48.16:0,48,895	0/0:17,0:17:45.15:0,45,900	0/0:20,1:19:22.76:0,23,784	0/0:16,0:15:26.93:0,27,318	0/0:13,1:14:3.01:0,3,49	0/0:19,1:20:51.17:0,51,1000	0/0:19,0:19:7.80:0,8,717	0/0:26,0:26:41.65:0,42,1245	1/1:4,2:6:9.03:133,9,0	0/0:27,0:27:71.24:0,71,1448	0/1:23,0:23:24.30:24,0,328	0/0:17,0:17:51.17:0,51,1020
chr10	84296029	.	T	TTC	21980.51	PASS	AC=54;AF=0.964;AN=56;BaseQRankSum=-2.265;DP=594;FS=2.253;HRun=0;HaplotypeScore=205.2462;InbreedingCoeff=0.8162;MQ=70.63;MQ0=0;MQRankSum=-4.497;QD=38.16;ReadPosRankSum=3.645;VQSLOD=5.1944;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:36:99:1470,108,0	1/1:0,8:8:24.08:355,24,0	1/1:8,0:9:2.58:84,3,0	0/0:16,0:18:15.99:0,16,69	1/1:0,23:23:63.62:824,64,0	1/1:2,14:16:45.15:674,45,0	1/1:2,22:24:72.21:933,72,0	1/1:3,16:19:50.03:578,50,0	1/1:1,17:19:57.09:773,57,0	1/1:2,25:27:81:1135,81,0	1/1:3,10:13:29.30:377,29,0	1/1:3,30:33:93.24:1257,93,0	1/1:2,17:19:57.16:788,57,0	1/1:2,27:28:84.23:1195,84,0	1/1:2,25:27:78.23:1108,78,0	1/1:2,22:24:72.23:1038,72,0	1/1:4,21:25:63.19:938,63,0	1/1:3,20:23:49.80:850,50,0	1/1:0,13:13:39.13:573,39,0	1/1:1,17:18:51.17:755,51,0	1/1:3,30:33:72.91:1081,73,0	1/1:2,19:21:60.62:810,61,0	1/1:2,16:20:37.77:665,38,0	1/1:8,34:42:99:1600,107,0	1/1:3,11:14:33.47:474,33,0	1/1:1,16:17:51.15:666,51,0	1/1:1,17:19:57.10:771,57,0	1/1:0,5:5:15.05:209,15,0
chr10	84296030	.	GT	G	10869.09	PASS	AB=0.857;AC=55;AF=0.982;AN=56;BaseQRankSum=2.324;DP=594;FS=9.532;HRun=2;HaplotypeScore=233.7744;InbreedingCoeff=-0.0211;MQ=69.83;MQ0=0;MQRankSum=-3.160;QD=18.30;ReadPosRankSum=3.797;VQSLOD=3.6065;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,32:38:99:712,101,0	1/1:0,8:8:23.54:180,24,0	1/1:4,2:8:7.87:42,8,0	0/1:10,3:18:17.37:68,0,17	1/1:0,23:23:57.82:368,58,0	1/1:2,14:16:44.13:340,44,0	1/1:3,22:25:63.60:363,64,0	1/1:5,16:21:53.83:310,54,0	1/1:1,18:19:54.49:379,54,0	1/1:2,25:27:78.78:565,79,0	1/1:3,10:13:29.09:218,29,0	1/1:1,30:31:84.10:598,84,0	1/1:2,17:19:52.22:367,52,0	1/1:2,27:28:78.50:586,78,0	1/1:1,25:26:68.77:482,69,0	1/1:3,22:25:73.02:540,73,0	1/1:3,21:24:68.13:541,68,0	1/1:4,20:24:50.98:441,51,0	1/1:0,13:13:38.33:288,38,0	1/1:1,17:18:52.93:404,53,0	1/1:3,30:33:69.66:510,70,0	1/1:2,19:21:56.99:386,57,0	1/1:4,16:20:46.61:348,47,0	1/1:8,34:42:99:806,101,0	1/1:3,11:14:35.59:274,36,0	1/1:0,16:16:46.10:290,46,0	1/1:0,18:18:49.67:363,50,0	1/1:0,5:5:14.62:100,15,0
chr10	84297118	.	A	ACAC	923.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.455;DP=730;FS=0.000;HRun=0;HaplotypeScore=107.1878;InbreedingCoeff=0.9959;MQ=87.53;MQ0=0;MQRankSum=-0.627;QD=51.32;ReadPosRankSum=0.846;VQSLOD=5.3890;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,169,2723	0/0:7,0:7:21.07:0,21,350	0/0:21,0:21:54.18:0,54,865	0/0:31,0:31:72.22:0,72,1139	0/0:19,0:19:54.18:0,54,885	0/0:19,0:19:54.17:0,54,874	0/0:33,0:33:96.32:0,96,1576	0/0:23,0:23:63.15:0,63,953	0/0:22,0:22:60.20:0,60,999	0/0:35,0:35:96.32:0,96,1568	0/0:17,0:17:48.16:0,48,799	0/0:24,0:24:66.22:0,66,1086	0/0:22,0:22:66.23:0,66,1098	0/0:34,0:34:99:0,99,1582	0/0:29,0:29:84.29:0,84,1396	0/0:24,0:24:72.24:0,72,1176	0/0:48,0:48:99:0,135,2210	0/0:23,0:23:66.20:0,66,1064	0/0:20,0:20:57.19:0,57,949	0/0:15,0:15:39.12:0,39,621	0/0:45,0:45:99:0,132,2172	0/0:21,0:21:54.17:0,54,874	0/0:21,0:21:60.20:0,60,989	0/0:28,0:28:81.28:0,81,1340	1/1:2,16:18:45.15:1019,45,0	0/0:27,0:27:78.25:0,78,1246	0/0:24,0:24:69.24:0,69,1149	0/0:18,0:18:54.18:0,54,899
chr10	84298096	.	AC	A	3817.60	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.673;DP=801;FS=2.373;HRun=1;HaplotypeScore=74.6322;InbreedingCoeff=0.9994;MQ=90.99;MQ0=0;MQRankSum=-6.019;QD=39.36;ReadPosRankSum=3.184;VQSLOD=4.4631;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,63:63:99:2475,178,0	0/0:12,0:12:36.12:0,36,575	0/0:31,0:31:90.24:0,90,1329	0/0:31,0:31:93.18:0,93,1398	0/0:17,0:17:51.14:0,51,788	0/0:20,0:20:60.15:0,60,907	0/0:27,0:27:81.25:0,81,1247	0/0:31,0:31:87.28:0,87,1347	0/0:39,0:39:99:0,117,1868	0/0:33,0:33:99:0,99,1562	0/0:19,0:19:54.16:0,54,815	0/0:45,0:45:99:0,135,2061	0/0:27,0:27:81.26:0,81,1266	0/0:31,0:31:93.30:0,93,1460	1/1:0,34:34:96.32:1343,96,0	0/0:26,0:26:78.27:0,78,1244	0/0:28,0:28:84.19:0,84,1236	0/0:31,0:31:93.29:0,93,1452	0/0:20,0:20:60.18:0,60,897	0/0:24,0:24:72.20:0,72,1072	0/0:46,0:46:99:0,138,2152	0/0:23,0:23:69.22:0,69,1079	0/0:19,0:19:57.19:0,57,907	0/0:35,0:35:99:0,105,1602	0/0:27,0:27:81.26:0,81,1266	0/0:26,0:26:78.26:0,78,1225	0/0:27,0:26:81.28:0,81,1290	0/0:9,0:9:27.09:0,27,431
chr10	84298919	.	A	ATC	2044.57	PASS	AB=0.802;AC=29;AF=0.518;AN=56;BaseQRankSum=9.961;DP=558;FS=0.000;HRun=0;HaplotypeScore=135.5265;InbreedingCoeff=0.7684;MQ=61.16;MQ0=20;MQRankSum=-3.767;QD=6.64;ReadPosRankSum=0.406;VQSLOD=2.8295;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:36,2:38:24.69:260,25,0	1/1:1,6:7:9.03:131,9,0	0/0:41,0:14:7.77:0,8,129	0/0:33,0:12:7.68:0,8,76	0/0:23,0:23:42.82:0,43,375	0/0:22,0:22:23.99:0,24,438	1/1:12,0:17:2.94:18,3,0	1/1:28,0:27:14.80:103,15,0	0/0:16,0:16:36.02:0,36,360	1/1:5,2:18:44.90:427,45,0	1/1:18,0:15:20.81:197,21,0	0/0:17,0:17:44.98:0,45,454	0/0:15,0:15:23.89:0,24,186	0/0:7,0:7:15.02:0,15,159	1/1:22,0:22:30.32:196,30,0	1/1:3,16:19:12.11:188,12,0	0/1:8,0:22:12.04:63,0,12	0/0:22,0:22:34.32:0,34,436	1/1:15,0:18:17.79:130,18,0	0/1:15,0:19:0:0,0,0	0/1:7,0:6:0:0,0,0	0/0:13,0:13:14.58:0,15,123	0/0:21,0:21:35.97:0,36,330	0/0:17,0:18:44.88:0,45,469	1/1:16,0:18:3:26,3,0	1/1:5,13:18:29.05:346,29,0	1/1:15,0:19:14.89:114,15,0	1/1:6,5:11:3.01:48,3,0
chr10	84298931	.	CTG	C	513.68	PASS	AB=0.946;AC=27;AF=0.540;AN=50;BaseQRankSum=3.391;DP=560;FS=29.515;HRun=0;HaplotypeScore=122.5143;InbreedingCoeff=-0.4556;MQ=56.45;MQ0=24;MQRankSum=-0.293;QD=1.15;ReadPosRankSum=-3.845;VQSLOD=-0.3855;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:29:26.65:64,0,27	0/1:9,0:9:10.83:11,0,11	./.	./.	0/1:25,0:25:20.92:21,0,157	0/1:28,2:30:40.70:41,0,234	1/1:21,0:18:5.85:34,6,0	./.	0/1:14,3:17:5.54:6,0,323	0/1:23,0:20:20.09:22,0,20	0/1:18,0:15:13.37:13,0,16	0/1:17,4:21:52.77:53,0,427	0/1:9,0:12:5.12:8,0,5	0/1:8,2:10:11.60:12,0,184	1/1:12,0:22:19.89:98,20,0	0/1:21,0:21:3.91:31,0,4	0/1:25,0:24:23.40:31,0,23	0/1:18,6:25:61.40:61,0,261	0/1:23,0:21:16.64:17,0,23	1/1:17,0:17:8.75:50,9,0	0/1:10,0:9:0:0,0,0	1/1:8,0:15:2.48:14,2,0	0/1:17,1:18:11.81:12,0,193	0/1:19,1:20:4.89:5,0,403	0/0:21,0:20:4.74:0,5,17	0/1:21,0:21:33.70:34,0,53	0/1:13,0:13:13.28:13,0,13	0/0:8,0:7:1.25:0,1,3
chr10	84299947	.	GTCTCAAAATAA	G	11891.10	PASS	AB=0.897;AC=27;AF=0.482;AN=56;BaseQRankSum=16.324;DP=526;FS=2.155;HRun=0;HaplotypeScore=242.8206;InbreedingCoeff=0.7916;MQ=83.01;MQ0=0;MQRankSum=-15.840;QD=63.25;ReadPosRankSum=6.271;VQSLOD=4.5591;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:6,20:26:48.19:1781,48,0	1/1:0,5:5:15.05:540,15,0	0/0:31,0:31:93.32:0,93,4208	0/0:27,0:27:75.18:0,75,3417	0/0:28,0:28:81.26:0,81,4370	0/0:21,0:21:63.22:0,63,3564	1/1:3,8:11:19.54:790,20,0	0/1:3,0:3:4.26:36,0,4	0/0:18,0:18:54.19:0,54,3124	1/1:0,7:7:21.07:709,21,0	1/1:3,5:8:9.73:384,10,0	0/0:22,0:22:66.23:0,66,3807	0/1:25,1:26:29.85:30,0,3889	0/0:27,0:27:81.28:0,81,4552	1/1:2,14:16:30.51:1346,31,0	1/1:5,17:22:50.16:1776,50,0	1/1:4,10:14:5.63:683,6,0	0/0:25,0:25:75.26:0,75,4266	1/1:1,8:9:24.08:866,24,0	1/1:1,10:11:33.10:903,33,0	0/1:5,3:8:4.53:175,0,5	0/0:33,0:33:99:0,99,5690	0/0:24,0:24:72.25:0,72,4137	0/0:29,0:29:87.30:0,87,5005	1/1:3,7:10:10.38:691,10,0	0/0:33,0:33:99:0,99,5629	1/1:0,10:12:36.12:1181,36,0	0/0:20,0:20:60.21:0,60,3390
chr10	84299962	.	GCAGTA	G	6722.21	PASS	AB=0.633;AC=16;AF=0.286;AN=56;BaseQRankSum=16.423;DP=536;FS=5.209;HRun=0;HaplotypeScore=211.4749;InbreedingCoeff=-0.0517;MQ=77.05;MQ0=0;MQRankSum=-14.977;QD=34.47;ReadPosRankSum=5.606;VQSLOD=4.4195;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,20:26:86.12:1052,0,86	1/1:0,5:5:15.05:345,15,0	0/0:21,0:22:36.36:0,36,1754	0/0:21,0:21:54.16:0,54,1533	0/0:25,0:25:75.26:0,75,2446	0/0:20,0:20:60.21:0,60,1998	0/1:6,8:14:99:442,0,278	0/0:5,0:5:12.04:0,12,236	0/0:17,0:17:51.15:0,51,1617	0/1:4,7:11:99:402,0,192	0/1:4,5:9:99:170,0,134	0/0:23,0:23:69.24:0,69,2188	0/1:19,1:20:8.93:9,0,1801	0/0:27,0:27:81.26:0,81,2614	0/1:5,14:19:99:759,0,234	0/1:7,16:23:99:998,0,249	0/1:6,10:16:99:396,0,269	0/0:24,0:24:72.22:0,72,2258	1/1:0,8:8:24.08:554,24,0	0/1:2,10:12:87.28:453,0,87	0/1:4,3:7:72.84:73,0,175	0/0:38,0:38:99:0,114,3783	0/0:27,0:27:78.27:0,78,2598	0/0:35,0:35:99:0,105,3439	0/1:3,7:10:99:403,0,153	0/0:35,0:34:99:0,105,3346	0/1:4,11:15:99:665,0,172	0/0:22,0:22:66.23:0,66,2055
chr10	84299967	.	A	AAGAGGGACG	19215.53	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=12.955;DP=637;FS=6.541;HRun=0;HaplotypeScore=272.9096;InbreedingCoeff=0.9922;MQ=71.57;MQ0=0;MQRankSum=-18.522;QD=68.63;ReadPosRankSum=-3.788;VQSLOD=3.3744;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:28,5:36:53.06:1842,53,0	1/1:9,0:9:15.99:389,16,0	0/0:20,0:20:57.43:0,57,1518	0/0:22,0:22:11.67:0,12,986	0/0:25,0:25:75.26:0,75,2278	0/0:20,0:20:60.19:0,60,1749	1/1:17,6:23:47.63:1679,48,0	1/1:15,5:22:42.12:1592,42,0	0/0:18,0:18:48.15:0,48,1375	1/1:11,4:15:34.57:1176,35,0	1/1:11,4:16:30.57:1402,31,0	0/0:22,0:22:66.21:0,66,1916	0/0:21,0:21:53.71:0,54,1577	0/0:28,0:28:78.25:0,78,2264	1/1:21,5:26:51.11:1722,51,0	1/1:27,6:33:69.17:2433,69,0	1/1:13,5:20:28.27:1151,28,0	0/0:22,0:22:63.22:0,63,1856	1/1:13,0:13:27.59:557,28,0	1/1:15,2:18:35.69:1561,36,0	1/1:5,3:11:18.06:725,18,0	0/0:39,0:39:99:0,114,3288	0/0:27,0:27:81.24:0,81,2357	0/0:36,0:36:99:0,102,3003	1/1:14,3:17:36.23:1304,36,0	0/0:37,0:36:81.37:0,81,2892	1/1:16,4:21:48.60:1682,49,0	0/0:20,0:20:60.21:0,60,1836
chr10	84301425	.	C	CAG	676.95	PASS	AB=0.961;AC=26;AF=0.542;AN=48;BaseQRankSum=-1.740;DP=607;FS=33.326;HRun=0;HaplotypeScore=94.4708;InbreedingCoeff=0.3822;MQ=72.74;MQ0=8;MQRankSum=0.893;QD=1.85;ReadPosRankSum=-0.009;VQSLOD=0.0887;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:6.64:82,7,0	0/1:9,0:9:2.94:36,0,3	./.	0/1:48,0:27:0:0,0,0	0/0:19,0:19:2.84:0,3,14	./.	1/1:30,0:30:8.94:66,9,0	1/1:20,0:20:1.77:4,2,0	0/1:16,7:23:25.70:38,0,26	1/1:23,0:23:11.12:82,11,0	1/1:24,0:24:6.01:66,6,0	0/0:21,0:22:2.84:0,3,14	0/0:12,0:12:1.07:0,1,19	0/0:20,0:20:9:0,9,85	./.	1/1:26,0:26:16.86:200,17,0	1/1:22,0:26:6.02:69,6,0	0/0:21,0:20:11.80:0,12,83	1/1:11,0:11:0.94:2,1,0	0/1:22,0:22:0.01:1,0,0	0/1:32,0:33:8.11:19,0,8	0/0:18,0:19:2.84:0,3,14	./.	0/0:34,0:35:15.29:0,15,125	1/1:8,0:8:2.22:7,2,0	0/0:20,0:20:1.91:0,2,23	1/1:20,2:21:14.50:145,15,0	0/1:4,0:3:0:0,0,0
chr10	84301750	.	T	TCCTCTTGCTTC	366.91	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.736;DP=660;FS=2.028;HRun=0;HaplotypeScore=204.1571;InbreedingCoeff=0.9294;MQ=73.67;MQ0=0;MQRankSum=-1.629;QD=36.69;ReadPosRankSum=1.034;VQSLOD=3.4691;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:75.23:0,75,2252	0/0:11,0:11:27.09:0,27,796	0/0:17,0:17:21.51:0,22,358	0/0:10,0:10:20.99:0,21,324	0/0:19,0:19:33.06:0,33,739	0/0:25,0:25:57.15:0,57,1653	0/0:30,0:30:51.16:0,51,1502	0/0:31,0:31:36.08:0,36,687	0/0:29,0:29:72.14:0,72,1966	0/0:23,0:23:53.90:0,54,1357	0/0:25,0:25:48.16:0,48,1415	0/0:32,0:32:87.25:0,87,2418	0/0:24,0:24:60.17:0,60,1722	0/0:33,0:33:90.24:0,90,2428	0/0:20,0:20:51.15:0,51,1389	0/0:24,0:24:54.14:0,54,1557	0/0:30,0:30:60.12:0,60,1684	0/0:25,0:25:63.15:0,63,1698	0/0:27,0:27:33.10:0,33,907	0/0:18,0:18:35.97:0,36,794	0/0:32,0:32:78.25:0,78,2392	0/0:21,0:21:42.08:0,42,1005	0/0:23,0:23:54.18:0,54,1461	0/0:28,0:28:69.19:0,69,2042	1/1:5,4:10:9.03:450,9,0	0/0:24,0:24:54.13:0,54,1527	0/0:17,0:17:33.09:0,33,854	0/0:18,0:18:42.14:0,42,1378
chr10	84301959	.	CTG	C	228.97	PASS	AB=0.942;AC=18;AF=0.360;AN=50;BaseQRankSum=3.090;DP=772;FS=3.306;HRun=0;HaplotypeScore=182.9777;InbreedingCoeff=0.1048;MQ=58.34;MQ0=7;MQRankSum=-1.508;QD=0.66;ReadPosRankSum=2.881;VQSLOD=2.1849;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:30:2.84:14,3,0	1/1:7,0:8:1.76:12,2,0	./.	./.	0/1:20,0:20:0.01:0,0,0	0/1:24,0:25:2.10:2,0,120	0/0:25,0:25:17.92:0,18,241	0/0:40,0:40:0:0,0,0	0/0:31,0:33:18:0,18,227	0/0:41,0:41:32.50:0,32,159	0/0:15,0:18:0.47:0,0,1	0/1:28,1:27:18.81:19,0,97	0/0:23,0:21:27.54:0,28,375	0/1:29,1:29:26.06:26,0,37	./.	1/1:14,0:19:11.27:53,11,0	0/1:26,0:28:0:0,0,0	0/1:20,1:22:25.14:25,0,177	0/0:19,0:18:3:0,3,25	0/0:18,0:18:7.15:0,7,70	0/0:81,0:79:17.59:0,18,181	0/1:30,1:29:32.32:32,0,33	0/1:22,1:23:21.48:21,0,64	0/1:41,8:50:99:124,0,241	1/1:11,0:14:5.67:23,6,0	0/0:33,0:38:30.53:0,31,290	0/1:14,2:17:15.75:16,0,158	0/0:11,0:11:11.50:0,11,95
chr10	84302009	.	GGCA	G	1739.17	PASS	AB=0.795;AC=12;AF=0.214;AN=56;BaseQRankSum=13.812;DP=791;FS=4.650;HRun=0;HaplotypeScore=226.9252;InbreedingCoeff=-0.2740;MQ=43.28;MQ0=28;MQRankSum=-11.678;QD=5.72;ReadPosRankSum=-1.385;VQSLOD=2.2608;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:57:0,57,1242	0/1:7,5:12:71.43:71,0,425	0/0:43,0:15:45.15:0,45,999	0/0:51,0:15:36.08:0,36,775	0/1:17,8:24:27.13:27,0,630	0/0:18,0:18:35.90:0,36,732	0/0:33,0:33:37.06:0,37,1772	0/0:27,0:24:65.90:0,66,1580	0/0:25,2:27:39.82:0,40,893	0/1:29,19:48:99:705,0,1607	0/1:12,3:14:43.30:43,0,277	0/0:20,2:22:25.95:0,26,794	0/1:17,3:20:32.63:33,0,1044	0/0:26,0:22:47.02:0,47,1027	0/0:31,2:33:24.51:0,25,1102	0/0:14,1:14:14.22:0,14,436	0/0:16,0:16:43.39:0,43,976	0/0:21,1:21:20.58:0,21,1240	0/0:13,0:12:27.01:0,27,728	0/1:16,8:24:99:215,0,887	0/0:59,1:58:99:0,108,2608	0/1:19,19:36:99:299,0,716	0/1:19,6:25:22.38:22,0,960	0/0:50,0:49:99:0,105,2138	0/1:18,11:28:99:192,0,569	0/1:27,5:30:99:164,0,1444	0/1:17,4:21:87:87,0,748	0/1:15,0:13:33.39:33,0,659
chr10	84302023	.	T	TATC	1587.06	PASS	AB=0.858;AC=11;AF=0.196;AN=56;BaseQRankSum=10.495;DP=835;FS=15.537;HRun=0;HaplotypeScore=288.2379;InbreedingCoeff=-0.2363;MQ=46.28;MQ0=12;MQRankSum=-8.666;QD=5.40;ReadPosRankSum=-0.964;VQSLOD=1.1064;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:59.28:0,59,1116	0/1:11,2:13:88.18:88,0,448	0/0:46,0:20:51:0,51,860	0/0:58,0:26:58.27:0,58,899	0/1:20,4:23:22.88:23,0,537	0/0:19,0:19:35.15:0,35,620	0/0:39,0:39:93.18:0,93,1621	0/0:27,0:26:75.08:0,75,1279	0/0:30,0:30:28.25:0,28,566	0/1:38,10:48:99:489,0,1597	0/1:16,2:17:51.37:51,0,213	0/0:26,0:26:30.73:0,31,717	0/0:18,0:18:27.92:0,28,688	0/0:30,0:27:41.96:0,42,779	0/0:33,0:33:57.18:0,57,1014	0/1:17,0:16:4.08:4,0,421	0/0:18,0:18:48.16:0,48,879	0/0:22,1:22:13.72:0,14,1049	0/0:19,0:18:45.15:0,45,823	0/1:22,7:29:99:260,0,625	0/0:61,0:59:99:0,114,2047	0/1:23,9:31:99:329,0,545	0/1:18,4:22:12.17:12,0,689	0/0:45,0:45:92.71:0,93,1682	0/1:20,9:28:99:244,0,559	0/1:33,3:35:83.37:83,0,1322	0/1:22,4:26:99:148,0,597	0/0:11,0:11:30.10:0,30,556
chr10	84302094	.	A	ATG	2062.01	PASS	AB=1.000;AC=49;AF=0.942;AN=52;BaseQRankSum=-1.688;DP=396;FS=0.000;HRun=0;HaplotypeScore=132.2637;InbreedingCoeff=0.3663;MQ=40.64;MQ0=6;MQRankSum=-1.732;QD=5.79;ReadPosRankSum=1.421;VQSLOD=2.9950;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,1:14:1.89:2,2,0	1/1:8,0:8:3:25,3,0	0/1:7,0:1:0:0,0,0	0/0:8,0:4:1.82:0,2,5	1/1:19,0:18:8.83:76,9,0	1/1:16,0:16:0.47:1,0,0	1/1:16,0:16:7.25:35,7,0	1/1:22,0:21:23.97:225,24,0	./.	1/1:24,0:24:47.97:441,48,0	1/1:6,0:5:3.47:27,3,0	1/1:16,0:16:3.01:35,3,0	1/1:6,0:6:0.47:1,0,0	./.	1/1:12,0:12:6.49:89,6,0	1/1:8,0:7:0.47:1,0,0	1/1:9,0:9:5.05:43,5,0	1/1:8,1:8:9:79,9,0	1/1:9,0:8:8.37:82,8,0	1/1:19,0:19:7.87:54,8,0	1/1:33,0:32:26.63:187,27,0	1/1:18,0:17:10.42:91,10,0	1/1:14,1:15:6.96:93,7,0	1/1:22,0:22:1.41:2,1,0	1/1:15,0:15:0.47:1,0,0	1/1:19,1:19:47.74:424,48,0	1/1:7,0:7:9.01:93,9,0	1/1:6,0:6:3.01:37,3,0
chr10	84302502	.	GCC	G	1432.35	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.015;DP=537;FS=56.462;HRun=2;HaplotypeScore=111.7978;InbreedingCoeff=0.9838;MQ=85.23;MQ0=0;MQRankSum=-10.987;QD=23.87;ReadPosRankSum=2.743;VQSLOD=-0.4965;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,2123	1/1:0,5:5:15.03:155,15,0	0/0:22,0:21:61.42:0,61,1117	0/0:23,0:23:60:0,60,1123	0/0:19,0:19:51.17:0,51,1014	0/0:12,0:12:36.12:0,36,729	0/0:28,0:28:84.29:0,84,1705	0/0:29,0:29:87.30:0,87,1766	0/0:19,0:19:57.20:0,57,1157	1/1:3,10:13:38.51:341,39,0	1/1:3,4:7:9.02:88,9,0	0/0:20,0:20:57.20:0,57,1157	0/0:18,0:18:54.17:0,54,1041	0/0:16,0:16:48.16:0,48,974	0/0:25,0:25:75.26:0,75,1520	1/1:1,15:16:48.10:484,48,0	1/1:0,8:8:21.04:210,21,0	0/0:32,0:32:96.29:0,96,1906	0/0:17,0:17:48.15:0,48,919	0/0:12,0:12:33.11:0,33,652	0/0:44,0:44:99:0,129,2568	0/0:15,0:15:45.15:0,45,878	0/0:20,0:20:51.16:0,51,998	0/0:19,0:19:57.18:0,57,1122	1/1:0,11:11:33.07:337,33,0	0/0:21,0:21:63.21:0,63,1222	0/0:18,0:17:51.17:0,51,1015	0/0:12,0:12:36.08:0,36,690
chr10	84302505	.	GTCCCCAC	G	3214.43	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.224;DP=537;FS=53.677;HRun=0;HaplotypeScore=159.3191;InbreedingCoeff=0.9898;MQ=84.20;MQ0=0;MQRankSum=-10.714;QD=55.42;ReadPosRankSum=2.029;VQSLOD=1.6756;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,4454	1/1:0,5:5:15.05:330,15,0	0/0:21,0:20:54.18:0,54,1902	0/0:23,0:23:56.40:0,56,2040	0/0:20,0:20:48.16:0,48,1926	0/0:11,0:11:33.11:0,33,1385	0/0:31,0:31:90.31:0,90,3669	0/0:29,0:29:87.29:0,87,3451	0/0:22,0:22:66.23:0,66,2767	1/1:3,10:13:37.93:681,38,0	1/1:2,4:6:12.01:214,12,0	0/0:20,0:20:60.21:0,60,2434	0/0:16,0:16:48.16:0,48,2011	0/0:16,0:16:48.16:0,48,2008	0/0:25,0:25:75.26:0,75,3046	1/1:0,15:15:45.15:981,45,0	1/1:0,8:8:24.04:474,24,0	0/0:33,0:33:99:0,99,3921	0/0:16,0:16:48.16:0,48,1909	0/0:13,0:13:39.13:0,39,1565	0/0:43,0:43:99:0,126,4986	0/0:16,0:16:48.16:0,48,1771	0/0:20,0:20:51.18:0,51,2115	0/0:18,0:18:54.17:0,54,2165	1/1:0,11:11:33.11:720,33,0	0/0:21,0:21:63.22:0,63,2636	0/0:17,0:16:48.16:0,48,2007	0/0:11,0:11:33.11:0,33,1384
chr10	84305828	.	C	CCCT	11477.49	PASS	AB=0.917;AC=23;AF=0.411;AN=56;BaseQRankSum=-14.886;DP=710;FS=0.000;HRun=0;HaplotypeScore=96.5073;InbreedingCoeff=0.9339;MQ=72.01;MQ0=1;MQRankSum=-3.931;QD=37.02;ReadPosRankSum=-0.987;VQSLOD=5.0851;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:93.31:0,93,1335	1/1:1,16:18:48.16:956,48,0	0/0:23,0:20:36.11:0,36,497	0/0:26,0:23:12.88:0,13,379	0/0:23,0:23:60.20:0,60,861	0/0:22,0:22:51.16:0,51,716	1/1:10,24:35:56.95:1162,57,0	1/1:22,14:36:45.15:916,45,0	0/0:32,0:32:87.29:0,87,1246	1/1:4,13:17:42.14:840,42,0	1/1:3,10:13:33.11:669,33,0	0/0:26,0:26:66.20:0,66,926	0/0:25,0:25:57.19:0,57,820	0/0:38,0:38:90.29:0,90,1278	0/0:34,0:34:90.30:0,90,1292	1/1:3,20:24:66.23:1298,66,0	1/1:8,40:50:99:2080,102,0	0/0:23,0:23:57.19:0,57,820	1/1:14,4:18:21.07:403,21,0	1/1:2,11:14:33.11:663,33,0	1/1:10,32:43:72.25:1469,72,0	0/0:18,0:18:48.16:0,48,691	0/0:15,0:15:38.78:0,39,561	0/0:30,0:30:65.79:0,66,925	0/0:15,0:15:36.11:0,36,499	0/1:20,1:22:7.05:7,0,680	1/1:3,17:19:51.17:1014,51,0	0/0:13,0:13:33.11:0,33,475
chr10	84310755	.	CTT	C	843.40	PASS	AB=0.847;AC=12;AF=0.214;AN=56;BaseQRankSum=4.986;DP=432;FS=2.145;HRun=14;HaplotypeScore=54.0058;InbreedingCoeff=0.6641;MQ=71.65;MQ0=5;MQRankSum=0.698;QD=9.58;ReadPosRankSum=3.771;VQSLOD=1.3393;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:25:40.55:0,41,455	1/1:2,4:6:5.88:45,6,0	0/0:20,0:12:6.02:0,6,67	0/0:15,0:9:6.29:0,6,42	0/0:19,0:22:54.02:0,54,673	0/0:19,1:22:16.76:0,17,452	0/0:18,0:19:45.85:0,46,565	0/0:34,0:35:50.85:0,51,642	0/0:8,0:8:15.03:0,15,191	1/1:6,3:10:10.79:85,11,0	1/1:1,6:7:11.91:111,12,0	0/0:12,0:14:26.01:0,26,253	0/0:11,0:11:1.76:0,2,191	0/0:8,0:8:15.94:0,16,212	0/0:9,0:10:20.89:0,21,169	1/1:2,10:14:20.58:225,21,0	1/1:5,25:28:56.69:511,57,0	0/0:20,0:23:56.10:0,56,688	0/0:16,0:13:18.03:0,18,233	0/0:15,0:15:27.02:0,27,338	0/0:15,0:15:28.90:0,29,367	0/0:5,0:5:12.03:0,12,151	0/0:12,0:12:26.96:0,27,302	0/1:15,2:17:13.41:13,0,446	0/0:6,0:13:23.99:0,24,233	0/0:11,0:12:27.02:0,27,310	0/0:16,1:19:19.63:0,20,433	0/1:3,1:4:21.74:22,0,36
chr10	84310853	.	C	CT	251.19	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=0.052;DP=349;FS=8.617;HRun=9;HaplotypeScore=56.9154;InbreedingCoeff=0.5120;MQ=59.90;MQ0=2;MQRankSum=-1.852;QD=10.92;ReadPosRankSum=0.858;VQSLOD=1.8932;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:41.98:0,42,362	0/0:13,0:13:23.98:0,24,208	0/0:8,0:6:11.98:0,12,101	0/0:2,0:2:3:0,3,26	0/0:15,0:15:38.89:0,39,329	0/0:11,0:11:26.98:0,27,230	0/0:9,0:9:20.99:0,21,182	0/0:27,0:26:65.98:0,66,571	0/1:6,0:6:4.36:4,0,89	0/0:13,0:13:29.98:0,30,259	0/0:16,0:16:38.88:0,39,329	0/0:6,0:6:14.98:0,15,126	0/0:6,0:6:15:0,15,130	0/0:2,0:2:6:0,6,52	0/0:5,0:5:9:0,9,78	0/0:9,0:9:26.99:0,27,234	0/0:25,0:25:53.99:0,54,469	0/0:21,0:21:53.96:0,54,464	0/0:19,0:17:29.95:0,30,253	0/0:17,0:17:41.97:0,42,364	0/0:6,0:6:9:0,9,78	0/0:6,0:6:15:0,15,130	0/0:15,0:15:29.96:0,30,253	0/0:10,0:10:17.99:0,18,156	1/1:5,11:15:32.96:345,33,0	0/0:19,0:19:44.96:0,45,388	0/0:20,0:20:40.84:0,41,333	0/0:11,0:11:32.99:0,33,287
chr10	84310866	.	GATTT	G	3535.90	PASS	AB=0.715;AC=26;AF=0.500;AN=52;BaseQRankSum=8.220;DP=330;FS=11.115;HRun=0;HaplotypeScore=54.5683;InbreedingCoeff=0.6627;MQ=56.21;MQ0=5;MQRankSum=-0.161;QD=19.32;ReadPosRankSum=1.187;VQSLOD=2.0261;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:39.13:0,39,834	1/1:2,9:11:21.07:343,21,0	./.	./.	0/0:17,0:17:28.85:0,29,704	0/0:12,0:11:18.06:0,18,438	1/1:4,4:8:6.02:98,6,0	1/1:18,7:24:15.05:239,15,0	0/1:4,0:5:18.54:19,0,137	1/1:5,8:13:21.07:343,21,0	1/1:4,11:15:27.09:441,27,0	0/0:5,0:5:3.48:0,3,74	0/0:6,0:6:12.04:0,12,287	0/0:2,0:2:3.01:0,3,73	1/1:2,3:5:3.01:49,3,0	1/1:6,4:9:9.03:147,9,0	0/1:9,19:27:23.16:549,0,23	0/0:24,0:24:45.63:0,46,1068	1/1:7,6:10:15:191,15,0	1/1:6,8:14:24.05:364,24,0	1/1:3,1:4:3.01:49,3,0	0/0:6,0:6:6.02:0,6,146	0/0:8,0:8:3.01:0,3,73	0/0:6,0:6:15.05:0,15,330	1/1:8,9:14:12:167,12,0	0/0:20,0:20:39.13:0,39,902	1/1:2,13:15:33.11:539,33,0	0/0:14,0:14:30.10:0,30,716
chr10	84311773	.	CT	C	4113.17	PASS	AB=0.855;AC=24;AF=0.429;AN=56;BaseQRankSum=7.420;DP=557;FS=4.761;HRun=11;HaplotypeScore=72.9814;InbreedingCoeff=0.8476;MQ=74.36;MQ0=1;MQRankSum=-1.378;QD=15.70;ReadPosRankSum=1.293;VQSLOD=4.4416;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.16:0,63,670	1/1:1,8:9:17.97:148,18,0	0/0:11,0:10:17.77:0,18,144	0/0:16,0:16:23.99:0,24,176	0/0:28,0:28:66.17:0,66,702	0/0:17,1:18:17.46:0,17,391	1/1:4,22:26:50.94:419,51,0	1/1:10,18:28:50.87:414,51,0	0/0:18,0:18:48.11:0,48,504	1/1:6,18:24:53.89:440,54,0	1/1:2,14:16:41.95:345,42,0	0/1:13,2:16:4.28:4,0,353	0/0:9,0:9:20.84:0,21,205	0/0:22,0:22:57.14:0,57,608	0/0:22,0:22:63.16:0,63,672	1/1:1,12:13:26.97:222,27,0	1/1:0,22:23:61.97:499,62,0	0/0:18,0:18:23.69:0,24,427	1/1:6,17:24:49.94:396,50,0	1/1:2,21:24:64.94:523,65,0	1/1:5,13:18:4.08:239,4,0	0/0:20,0:21:56.71:0,57,569	0/1:18,5:23:54.01:54,0,491	0/0:25,0:28:62.82:0,63,635	0/0:3,0:23:51.27:0,51,257	0/0:25,1:26:35.51:0,36,577	1/1:2,16:18:50.87:411,51,0	0/0:11,0:11:33.03:0,33,332
chr10	84312014	.	G	GT	369.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.024;DP=542;FS=0.985;HRun=9;HaplotypeScore=66.6420;InbreedingCoeff=0.8143;MQ=84.90;MQ0=0;MQRankSum=-2.231;QD=18.49;ReadPosRankSum=1.990;VQSLOD=3.9380;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:80.84:0,81,686	0/0:8,0:8:20.96:0,21,177	0/0:23,0:23:41.69:0,42,334	0/0:19,0:19:35.32:0,35,276	0/0:14,0:14:35.98:0,36,310	0/0:14,1:15:5.77:0,6,270	0/0:21,0:21:53.95:0,54,463	0/0:27,0:27:68.96:0,69,595	0/0:15,0:15:35.97:0,36,310	0/0:13,0:13:23.97:0,24,206	0/0:6,0:6:11.99:0,12,104	0/0:17,0:17:38.95:0,39,335	0/0:19,0:19:53.93:0,54,459	0/0:28,0:28:68.96:0,69,596	0/0:35,0:36:95:0,95,812	0/0:15,0:15:39.46:0,39,340	0/0:25,0:25:62.88:0,63,527	0/0:25,2:29:18.71:0,19,596	0/0:19,0:20:43.98:0,44,360	0/0:8,0:8:20.98:0,21,179	0/0:30,0:30:71.95:0,72,621	0/0:14,0:14:35.99:0,36,313	0/0:6,0:6:17.98:0,18,153	0/0:29,0:29:80.96:0,81,699	1/1:2,18:20:42.11:465,42,0	0/0:17,0:17:35.97:0,36,313	0/0:31,0:32:76.95:0,77,646	0/0:4,0:4:8.96:0,9,73
chr10	84312232	.	CGAT	C	979.18	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.727;DP=718;FS=0.816;HRun=0;HaplotypeScore=106.5040;InbreedingCoeff=0.9950;MQ=76.79;MQ0=0;MQRankSum=-0.394;QD=33.76;ReadPosRankSum=2.260;VQSLOD=4.0313;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.25:0,93,2072	0/0:9,0:9:27.09:0,27,602	0/0:26,0:22:56.29:0,56,1080	0/0:34,0:29:70.41:0,70,1205	0/0:28,0:28:81.26:0,81,1766	0/0:15,0:15:45.15:0,45,1033	0/0:31,0:31:90.29:0,90,2003	0/0:28,0:28:75.24:0,75,1686	0/0:23,0:23:69.22:0,69,1545	0/0:22,0:22:60.19:0,60,1290	0/0:17,0:17:51.14:0,51,1054	0/0:31,0:31:90.31:0,90,2074	0/0:31,0:31:81.28:0,81,1865	0/0:20,0:20:57.20:0,57,1288	1/1:0,29:29:63.22:1074,63,0	0/0:23,0:23:66.21:0,66,1470	0/0:37,0:37:99:0,111,2531	0/0:26,0:26:78.25:0,78,1731	0/0:18,0:18:54.15:0,54,1199	0/0:29,0:29:78.25:0,78,1708	0/0:39,0:39:99:0,117,2571	0/0:24,0:24:72.23:0,72,1538	0/0:23,0:23:66.70:0,67,1488	0/0:39,0:39:99:0,117,2697	0/0:26,0:25:66.21:0,66,1472	0/0:20,0:20:60.21:0,60,1385	0/0:30,0:30:81.28:0,81,1866	0/0:8,0:8:21.07:0,21,455
chr10	84312576	.	AT	A	7104.24	PASS	AB=0.923;AC=53;AF=0.946;AN=56;BaseQRankSum=5.285;DP=455;FS=27.923;HRun=1;HaplotypeScore=138.9153;InbreedingCoeff=0.6013;MQ=94.44;MQ0=0;MQRankSum=-9.007;QD=16.68;ReadPosRankSum=3.361;VQSLOD=3.4957;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,1:13:26.16:180,26,0	1/1:5,2:7:20.21:171,20,0	0/0:28,1:29:15.92:0,16,352	0/1:22,2:24:23.37:23,0,317	1/1:12,9:21:51.90:427,52,0	1/1:9,1:10:22.09:148,22,0	1/1:10,5:15:19.36:241,19,0	1/1:5,7:12:23.50:204,24,0	1/1:4,3:7:18.67:106,19,0	1/1:13,8:21:58.96:518,59,0	1/1:5,3:8:18.83:161,19,0	1/1:12,3:15:41.01:258,41,0	1/1:11,4:15:18.86:123,19,0	1/1:8,4:12:23.77:163,24,0	1/1:25,12:37:87.12:456,87,0	1/1:16,8:24:58.88:276,59,0	1/1:15,3:18:48.64:372,49,0	1/1:10,1:11:23.95:219,24,0	1/1:5,2:7:17.73:151,18,0	1/1:15,4:19:55.85:546,56,0	1/1:9,4:13:29.67:155,30,0	1/1:13,5:18:51.37:430,51,0	1/1:8,9:17:44.33:319,44,0	1/1:16,9:25:47.74:268,48,0	1/1:10,3:13:30.89:293,31,0	1/1:15,2:17:44.39:427,44,0	1/1:14,9:23:41.69:371,42,0	1/1:3,1:4:11.81:98,12,0
chr10	84312579	.	A	AG	7742.62	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=6.137;DP=473;FS=33.523;HRun=1;HaplotypeScore=179.0704;InbreedingCoeff=0.9759;MQ=91.81;MQ0=0;MQRankSum=-9.454;QD=18.39;ReadPosRankSum=2.112;VQSLOD=2.5532;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,1:14:23.24:155,23,0	1/1:5,2:7:20.68:193,21,0	0/0:29,0:29:45.91:0,46,321	0/0:23,0:23:48.66:0,49,305	1/1:12,9:21:54.36:456,54,0	1/1:7,1:8:20.06:146,20,0	1/1:9,4:13:32.06:206,32,0	1/1:8,5:13:23.69:160,24,0	1/1:5,3:8:19.83:129,20,0	1/1:13,9:22:62.57:586,63,0	1/1:6,2:8:17.27:150,17,0	1/1:18,2:20:48.41:299,48,0	1/1:11,4:15:29.46:193,29,0	1/1:10,4:14:33.03:219,33,0	1/1:26,12:38:92.60:481,93,0	1/1:16,8:24:67.04:395,67,0	1/1:17,2:19:49.57:371,50,0	1/1:9,1:10:20.97:194,21,0	1/1:6,1:7:17.88:151,18,0	1/1:17,3:20:56.31:516,56,0	1/1:9,5:14:31.33:200,31,0	1/1:13,5:18:52.57:459,53,0	1/1:8,9:17:44.15:301,44,0	1/1:16,9:25:51.10:341,51,0	1/1:12,4:16:35.58:344,36,0	1/1:17,4:21:47.78:511,48,0	1/1:13,8:21:50.76:367,51,0	1/1:7,1:8:20.95:218,21,0
chr10	84316306	.	T	TGG	968.88	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.822;DP=647;FS=5.264;HRun=8;HaplotypeScore=83.1510;InbreedingCoeff=0.9988;MQ=87.55;MQ0=0;MQRankSum=-5.176;QD=11.40;ReadPosRankSum=-1.611;VQSLOD=0.5455;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,1:28:28.73:189,29,0	0/0:10,0:10:30.08:0,30,333	0/0:27,0:27:40.40:0,40,409	0/0:20,0:20:32.45:0,32,316	0/0:18,0:18:54.15:0,54,600	0/0:24,0:24:59.24:0,59,666	0/0:27,0:27:66.10:0,66,706	0/0:32,0:33:59.83:0,60,630	0/0:25,0:25:69.17:0,69,760	0/0:28,0:28:75.19:0,75,828	0/0:16,0:16:39.10:0,39,434	0/0:18,0:18:54.12:0,54,584	0/0:24,0:24:63.16:0,63,702	0/0:17,0:17:45.11:0,45,501	1/1:6,0:29:60.35:220,60,0	0/0:19,0:19:51.13:0,51,569	0/0:35,0:35:87.21:0,87,966	0/0:31,0:31:81.21:0,81,902	0/0:11,0:11:29.81:0,30,313	0/0:30,0:30:81.19:0,81,892	0/0:29,0:30:74.82:0,75,754	0/0:18,0:18:45.10:0,45,500	0/0:14,0:14:33.08:0,33,362	0/0:30,0:30:72.17:0,72,802	1/1:4,22:28:49.67:703,50,0	0/0:19,0:19:54.12:0,54,593	0/0:27,0:26:75.20:0,75,833	0/0:10,0:10:27.07:0,27,301
chr10	84316887	.	GC	G	3940.10	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.393;DP=633;FS=3.442;HRun=9;HaplotypeScore=72.4016;InbreedingCoeff=0.9834;MQ=74.81;MQ0=0;MQRankSum=-0.493;QD=20.52;ReadPosRankSum=4.819;VQSLOD=4.2747;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,39:42:93.03:851,93,0	1/1:1,5:6:15.01:137,15,0	0/0:11,0:11:23.58:0,24,214	0/0:20,0:20:41.83:0,42,388	0/0:20,0:20:48.12:0,48,535	0/0:23,0:23:60.17:0,60,682	0/0:32,0:32:81.24:0,81,934	0/0:26,0:26:54.14:0,54,607	0/0:29,1:30:56.96:0,57,892	1/1:2,19:21:56.70:505,57,0	1/1:1,13:14:36.02:329,36,0	0/0:23,0:23:66.20:0,66,761	0/0:17,0:17:45.13:0,45,519	0/0:18,0:18:51.14:0,51,579	1/1:0,0:21:40.74:120,41,0	1/1:2,23:25:25.41:487,25,0	1/1:3,38:41:99:1016,111,0	0/0:37,0:37:99:0,99,1132	0/0:13,1:15:8.60:0,9,340	0/0:10,0:10:15.04:0,15,173	0/0:39,0:39:96.27:0,96,1099	0/0:14,0:14:33.10:0,33,376	0/0:15,0:15:33.09:0,33,371	0/0:25,0:25:63.18:0,63,727	1/1:2,20:22:54.02:494,54,0	0/0:27,0:27:72.21:0,72,830	0/0:23,0:22:60.18:0,60,691	0/0:16,0:16:45.10:0,45,506
chr10	84320424	.	TC	T	12123.24	PASS	AB=0.733;AC=54;AF=0.964;AN=56;BaseQRankSum=-3.416;DP=393;FS=2.032;HRun=4;HaplotypeScore=48.2234;InbreedingCoeff=-0.0389;MQ=79.04;MQ0=0;MQRankSum=-1.702;QD=30.85;ReadPosRankSum=0.711;VQSLOD=4.8753;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:19:39.12:468,39,0	1/1:0,6:6:18.06:216,18,0	0/1:7,7:14:34.75:174,0,35	0/1:6,1:8:30.38:51,0,30	1/1:1,12:13:27.08:324,27,0	1/1:0,8:8:24.07:288,24,0	1/1:0,27:27:78.24:936,78,0	1/1:1,19:20:57.17:684,57,0	1/1:0,8:8:21.06:252,21,0	1/1:1,11:12:33.09:385,33,0	1/1:0,7:7:15.05:180,15,0	1/1:0,18:18:48.15:576,48,0	1/1:1,7:8:21.06:252,21,0	1/1:0,19:19:45.14:540,45,0	1/1:0,11:11:33.10:395,33,0	1/1:0,10:10:27.08:324,27,0	1/1:1,22:23:54.17:648,54,0	1/1:0,15:15:39.12:468,39,0	1/1:0,13:13:39.12:467,39,0	1/1:0,7:7:18.05:214,18,0	1/1:1,35:36:99:1224,102,0	1/1:0,19:19:54.17:648,54,0	1/1:0,9:9:21.06:252,21,0	1/1:0,15:15:42.13:504,42,0	1/1:0,14:14:42.13:504,42,0	1/1:0,14:14:42.13:502,42,0	1/1:0,12:12:30.09:360,30,0	1/1:0,8:8:24.07:288,24,0
chr10	84322045	.	CT	C	502.85	PASS	AB=0.871;AC=13;AF=0.232;AN=56;BaseQRankSum=7.139;DP=724;FS=8.373;HRun=14;HaplotypeScore=87.5887;InbreedingCoeff=-0.0988;MQ=62.77;MQ0=2;MQRankSum=0.822;QD=1.75;ReadPosRankSum=1.717;VQSLOD=-0.7273;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,1:58:48.31:0,48,345	0/0:8,0:10:11.02:0,11,120	0/0:26,0:15:22.97:0,23,137	0/1:17,0:11:33.11:33,0,49	0/0:19,1:21:31.67:0,32,391	0/1:22,4:28:7.59:8,0,476	0/1:22,3:26:9.88:10,0,362	0/1:19,2:23:21.88:22,0,154	0/1:20,4:24:23.76:24,0,374	0/0:31,2:33:15.61:0,16,423	0/0:10,1:11:3.42:0,3,167	0/1:25,4:30:22.67:23,0,397	0/0:21,1:22:33.40:0,33,424	0/0:29,2:31:25.13:0,25,468	1/1:6,23:30:64.35:437,64,0	0/0:32,0:36:72.74:0,73,639	0/1:22,7:30:33.96:34,0,303	0/0:29,0:34:52.25:0,52,549	0/1:28,2:31:31.53:32,0,294	0/0:15,1:17:14.55:0,15,304	0/0:21,3:26:17.86:0,18,454	0/1:18,2:23:11.33:11,0,170	0/1:6,2:8:20.15:20,0,118	0/0:20,0:20:47.99:0,48,423	0/0:20,0:21:32.85:0,33,286	0/0:32,3:36:8.83:0,9,368	0/0:26,1:31:45.57:0,46,519	0/1:13,2:17:3.14:3,0,270
chr10	84322853	.	C	CCTGT	2598.30	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.748;DP=601;FS=0.636;HRun=0;HaplotypeScore=108.3227;InbreedingCoeff=0.9883;MQ=66.73;MQ0=1;MQRankSum=-5.199;QD=41.24;ReadPosRankSum=1.078;VQSLOD=3.9833;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,23:30:45.15:1112,45,0	0/0:13,0:13:36.10:0,36,574	0/0:32,0:30:51.17:0,51,800	0/0:31,0:27:36.58:0,37,594	0/0:13,0:13:27.09:0,27,440	0/0:17,0:17:27.08:0,27,417	0/0:28,0:28:60.19:0,60,967	0/0:33,0:33:72.24:0,72,1164	0/0:15,0:15:33.11:0,33,552	0/0:21,0:21:33.10:0,33,506	0/0:11,0:11:21.06:0,21,326	0/0:26,0:26:54.18:0,54,901	0/0:20,0:20:42.12:0,42,674	0/0:31,0:31:87.30:0,87,1446	1/1:5,18:23:45.15:1110,45,0	0/0:18,0:18:51.17:0,51,853	0/0:20,0:20:50.54:0,51,811	0/0:31,0:31:67.16:0,67,1123	0/0:8,0:8:15.05:0,15,246	0/0:12,0:12:24.07:0,24,374	0/0:54,0:54:99:0,114,1831	0/0:15,0:15:24.08:0,24,399	0/0:9,0:9:27.07:0,27,421	0/0:35,0:35:90.31:0,90,1505	1/1:3,7:10:21.07:518,21,0	0/0:15,0:15:30.10:0,30,502	0/0:19,0:19:48.15:0,48,774	0/0:11,0:11:30.10:0,30,487
chr10	84324588	.	TA	T	1468.58	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=9.983;DP=395;FS=1.086;HRun=11;HaplotypeScore=44.2236;InbreedingCoeff=0.7817;MQ=73.27;MQ0=2;MQRankSum=0.401;QD=12.66;ReadPosRankSum=3.821;VQSLOD=3.0658;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:53.94:443,54,0	1/1:2,6:8:0.33:127,0,0	0/0:23,1:13:15.06:0,15,96	0/1:18,0:8:12.68:13,0,52	0/0:23,0:23:51.11:0,51,533	0/0:13,0:13:27.07:0,27,286	0/0:2,0:2:6.02:0,6,64	0/0:36,0:34:81.18:0,81,840	0/0:10,0:10:24.06:0,24,254	1/1:5,7:12:20.95:168,21,0	1/1:2,4:6:11.98:98,12,0	0/0:7,0:7:15.04:0,15,159	0/0:13,0:13:27.07:0,27,286	0/0:5,0:5:15.04:0,15,159	0/0:11,0:11:27.05:0,27,277	1/1:1,5:6:11.99:98,12,0	1/1:4,20:24:47.91:389,48,0	0/0:14,0:14:36.48:0,36,352	0/0:20,0:20:54.08:0,54,546	0/0:16,0:16:21.93:0,22,356	0/0:3,0:3:9.02:0,9,95	0/0:12,0:12:24.06:0,24,254	0/0:4,0:4:9.02:0,9,95	0/0:2,0:2:6:0,6,55	1/1:4,12:16:38.94:318,39,0	0/0:13,1:14:8.44:0,8,287	0/0:17,0:17:31.29:0,31,345	0/0:32,0:32:93.01:0,93,959
chr10	84328436	.	AG	A	5247.53	PASS	AB=0.945;AC=45;AF=0.804;AN=56;BaseQRankSum=2.896;DP=495;FS=4.073;HRun=11;HaplotypeScore=97.3025;InbreedingCoeff=0.3212;MQ=69.59;MQ0=1;MQRankSum=-0.822;QD=11.33;ReadPosRankSum=1.378;VQSLOD=4.6520;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,15:25:37.46:306,37,0	0/1:4,0:4:11.71:12,0,55	0/1:15,0:15:13.09:54,0,13	0/1:6,0:6:20.44:37,0,20	1/1:2,11:13:26.91:217,27,0	1/1:2,10:15:19.24:196,19,0	1/1:6,16:27:55.12:398,55,0	1/1:9,2:14:14.82:86,15,0	1/1:5,11:19:31.55:274,32,0	0/1:14,3:17:46.88:47,0,157	0/0:10,1:11:17.91:0,18,175	1/1:7,14:21:41.93:344,42,0	1/1:9,13:22:9.17:268,9,0	1/1:3,13:17:34.96:276,35,0	1/1:2,17:19:47.94:394,48,0	0/0:20,1:21:17.43:0,17,379	0/1:30,5:35:29.44:29,0,519	1/1:8,14:23:34.97:277,35,0	1/1:10,7:19:29.99:204,30,0	1/1:3,7:10:20.93:172,21,0	1/1:10,16:27:43.47:332,43,0	1/1:3,10:14:26.94:221,27,0	1/1:3,10:14:25.78:201,26,0	1/1:2,25:29:49.01:381,49,0	1/1:0,10:11:22.99:178,23,0	0/1:18,1:19:1.55:2,0,174	1/1:3,14:18:41.90:339,42,0	0/1:9,0:9:3.25:3,0,125
chr10	84331224	.	C	CTG	631.94	PASS	AB=0.897;AC=21;AF=0.420;AN=50;BaseQRankSum=-0.165;DP=556;FS=4.870;HRun=0;HaplotypeScore=94.6608;InbreedingCoeff=0.4461;MQ=66.30;MQ0=14;MQRankSum=-0.633;QD=2.82;ReadPosRankSum=-2.879;VQSLOD=1.1885;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:24:0:0,0,0	1/1:3,0:3:3:25,3,0	./.	./.	0/1:10,0:11:5.14:37,0,5	0/0:9,0:8:1.74:0,2,29	0/0:34,5:41:4.89:0,5,43	1/1:20,0:19:1.25:3,1,0	0/0:11,0:15:11.49:0,11,73	1/1:22,0:22:18.79:160,19,0	0/0:7,0:7:0:0,0,0	0/0:19,0:18:2.82:0,3,32	0/0:15,0:15:2.80:0,3,32	0/0:24,0:25:14.85:0,15,132	0/0:10,0:20:8.89:0,9,43	1/1:24,0:24:14.87:122,15,0	1/1:24,0:24:17.95:168,18,0	0/0:29,0:30:26.35:0,26,214	1/1:15,2:16:6.01:69,6,0	1/1:10,0:10:2.99:24,3,0	1/1:34,8:45:2.75:43,3,0	0/0:20,0:20:3:0,3,32	0/1:9,0:9:2.02:2,0,27	0/0:33,0:35:14.85:0,15,133	./.	1/1:19,0:18:4.67:13,5,0	0/1:10,8:18:19.78:119,0,20	0/0:9,0:9:14.77:0,15,126
chr10	84331657	.	TCCCGGGGGGGC	T	2172.69	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.491;DP=522;FS=1.783;HRun=0;HaplotypeScore=165.2250;InbreedingCoeff=0.9668;MQ=76.15;MQ0=0;MQRankSum=-7.903;QD=63.90;ReadPosRankSum=-0.048;VQSLOD=3.6690;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,30:34:66.23:2268,66,0	0/0:5,0:5:15.05:0,15,832	0/0:16,0:15:39.13:0,39,1544	0/0:13,0:14:32.90:0,33,1053	0/0:9,0:9:27.08:0,27,1308	0/0:18,0:18:54.19:0,54,3020	0/0:25,0:24:72.25:0,72,3865	0/0:16,0:16:45.15:0,45,1935	0/0:24,0:24:66.21:0,66,3241	0/0:19,0:19:57.20:0,57,3059	0/0:14,0:14:39.13:0,39,2154	0/0:28,0:28:84.29:0,84,4465	0/0:16,0:16:39.13:0,39,2013	0/0:26,0:26:75.24:0,75,3929	0/0:16,0:16:42.14:0,42,2133	0/0:16,0:16:36.12:0,36,1900	0/0:41,0:41:99:0,114,5831	0/0:26,0:26:72.25:0,72,3845	0/0:14,0:14:39.13:0,39,2124	0/0:8,0:8:21.07:0,21,1188	0/0:46,0:46:99:0,138,6581	0/0:6,0:6:18.06:0,18,1024	0/0:8,0:8:24.08:0,24,1375	0/0:32,0:32:93.32:0,93,4837	0/0:11,0:11:33.11:0,33,1723	0/0:16,0:16:42.14:0,42,2156	0/0:10,0:10:30.10:0,30,1715	0/0:8,0:8:24.08:0,24,1375
chr10	84333717	.	ATGCAAGGCT	A	1720.94	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.144;DP=682;FS=0.000;HRun=0;HaplotypeScore=186.6398;InbreedingCoeff=0.9919;MQ=78.63;MQ0=0;MQRankSum=-7.018;QD=78.22;ReadPosRankSum=0.723;VQSLOD=3.1789;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.31:0,90,4288	0/0:7,0:7:21.07:0,21,937	0/0:16,0:16:38.29:0,38,1152	0/0:19,0:19:40.64:0,41,1428	0/0:30,0:30:87.26:0,87,3972	0/0:25,0:25:69.24:0,69,3164	0/0:31,0:31:93.32:0,93,4315	0/0:19,0:19:48.16:0,48,2041	0/0:30,0:30:81.28:0,81,3900	0/0:25,0:25:72.24:0,72,3272	0/0:16,0:16:45.15:0,45,2125	0/0:24,0:24:60.21:0,60,2893	0/0:21,0:21:60.19:0,60,2714	0/0:24,0:24:69.22:0,69,3073	1/1:1,21:22:60.21:1816,60,0	0/0:28,0:28:81.27:0,81,3738	0/0:30,0:30:87.26:0,87,3884	0/0:38,0:38:99:0,105,4827	0/0:28,0:28:75.24:0,75,3270	0/0:18,0:18:51.18:0,51,2447	0/0:28,0:28:84.29:0,84,3862	0/0:21,0:21:60.21:0,60,2879	0/0:27,0:27:81.28:0,81,3796	0/0:35,0:35:99:0,105,5053	0/0:20,0:20:60.21:0,60,2855	0/0:32,0:32:93.31:0,93,4168	0/0:29,0:29:87.28:0,87,3897	0/0:8,0:8:21.07:0,21,886
chr10	84335677	.	A	ATG	6443.13	PASS	AB=0.988;AC=33;AF=0.589;AN=56;BaseQRankSum=-7.789;DP=674;FS=1.111;HRun=0;HaplotypeScore=300.1918;InbreedingCoeff=-0.6925;MQ=70.02;MQ0=0;MQRankSum=-1.815;QD=9.56;ReadPosRankSum=-15.283;VQSLOD=-0.0177;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:47,0:47:82.35:593,0,82	0/1:9,0:9:23.11:53,0,23	0/1:14,4:18:88.25:196,0,88	0/1:16,0:18:23.18:96,0,23	1/1:25,0:25:44.70:519,45,0	0/1:15,0:15:36.98:37,0,80	0/1:32,0:32:89.31:257,0,89	0/1:19,0:19:47.46:398,0,47	0/1:21,0:21:69.85:70,0,106	0/1:28,0:28:99:205,0,157	1/1:17,0:17:29.82:401,30,0	0/1:36,0:36:86.48:352,0,86	0/1:28,0:28:28.92:29,0,165	0/1:27,0:27:99:179,0,108	0/1:22,0:22:35.77:36,0,117	0/1:31,0:30:99:221,0,135	0/1:32,0:32:79.59:356,0,80	0/1:21,0:21:58.05:68,0,58	0/1:24,0:24:86.79:102,0,87	0/1:23,0:23:21.15:412,0,21	1/1:30,0:30:31.62:472,32,0	1/1:22,0:22:37.63:468,38,0	1/1:18,0:18:29.51:295,30,0	0/1:27,0:27:24.53:204,0,25	0/1:28,0:28:82.99:206,0,83	0/1:21,0:21:14.33:14,0,111	0/1:24,0:23:88.07:88,0,99	0/1:11,0:11:39.12:116,0,39
chr10	84340446	.	T	TC	79.49	PASS	AB=0.616;AC=19;AF=0.365;AN=52;BaseQRankSum=-0.650;DP=218;FS=0.859;HRun=0;HaplotypeScore=197.3235;InbreedingCoeff=0.3764;MQ=29.15;MQ0=0;MQRankSum=-0.592;QD=0.82;ReadPosRankSum=-2.167;VQSLOD=2.4461;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:0,8:12:15.07:0,15,72	1/1:0,2:2:4.59:15,5,0	./.	./.	0/0:0,13:15:2.37:0,2,8	0/0:1,7:9:15.44:0,15,64	0/1:2,9:12:8.13:8,0,39	1/1:0,1:3:0.38:6,0,0	0/0:0,10:12:16.88:0,17,80	1/1:0,2:5:1.95:11,2,0	1/1:0,3:4:1.82:5,2,0	0/0:0,10:12:20.93:0,21,91	0/0:1,5:8:7.42:0,7,50	0/0:0,5:8:14.20:0,14,55	0/1:4,2:8:0.07:11,0,0	1/1:0,8:8:18.52:61,19,0	1/1:0,10:11:16.27:66,16,0	0/1:0,8:9:4.43:4,0,43	0/1:0,6:8:1.13:12,0,1	0/1:0,6:7:1.22:2,0,1	0/1:0,12:13:4.19:17,0,4	0/0:0,3:4:0.83:0,1,13	0/0:1,4:5:7.63:0,8,26	0/0:0,11:11:13.90:0,14,57	0/0:0,10:11:12.94:0,13,50	0/1:1,2:7:8.49:8,0,24	0/0:0,11:12:19.07:0,19,94	0/0:0,2:2:5.85:0,6,34
chr10	84340461	.	C	CCA	631.84	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=4.899;DP=302;FS=8.844;HRun=0;HaplotypeScore=201.4009;InbreedingCoeff=0.0704;MQ=50.53;MQ0=0;MQRankSum=-1.546;QD=2.17;ReadPosRankSum=-0.080;VQSLOD=1.8388;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,2:14:7.27:47,7,0	1/1:4,0:4:5.25:21,5,0	1/1:5,0:5:2.59:10,3,0	0/0:8,0:5:2.13:0,2,6	1/1:15,1:16:1.48:4,1,0	0/1:15,0:15:9.28:9,0,25	0/1:15,0:15:5.68:22,0,6	1/1:5,0:5:5.54:26,6,0	1/1:16,0:16:10.79:33,11,0	1/1:5,0:5:5.16:26,5,0	1/1:5,0:5:2.68:11,3,0	1/1:14,0:14:14.59:44,15,0	0/1:12,0:12:7.38:7,0,9	0/1:13,0:13:0.60:3,0,1	1/1:12,0:12:0.47:1,0,0	1/1:11,0:11:1.98:45,2,0	0/1:18,0:18:23.31:23,0,27	1/1:9,1:10:19.65:95,20,0	0/1:12,0:12:25.56:48,0,26	1/1:7,0:7:4.90:18,5,0	0/1:20,0:20:2.31:9,0,2	1/1:8,0:8:1.93:7,2,0	1/1:6,0:6:1.36:2,1,0	1/1:13,0:13:1.15:5,1,0	1/1:12,0:12:27.88:171,28,0	0/1:7,0:7:6.18:6,0,8	1/1:16,0:16:20.34:62,20,0	0/0:3,0:3:0.43:0,0,10
chr10	84340462	.	C	CA	417.38	PASS	AB=0.993;AC=36;AF=0.643;AN=56;BaseQRankSum=4.651;DP=262;FS=0.801;HRun=0;HaplotypeScore=142.1360;InbreedingCoeff=-0.0329;MQ=53.25;MQ0=0;MQRankSum=-1.135;QD=1.75;ReadPosRankSum=-1.307;VQSLOD=2.7822;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:9.59:28,0,10	0/1:4,0:4:1.99:2,0,17	0/1:5,0:5:20.88:21,0,40	0/1:8,0:5:4.43:4,0,17	1/1:14,0:14:1.33:4,1,0	0/1:15,0:15:7.19:7,0,27	1/1:7,4:12:6.68:47,7,0	0/0:2,0:2:0:0,0,0	0/1:14,0:14:6.46:6,0,18	1/1:4,0:4:2.17:12,2,0	1/1:4,0:4:2.68:11,3,0	0/1:14,0:14:1.82:14,0,2	0/1:10,0:10:8.08:13,0,8	0/1:12,0:12:1.18:3,0,1	0/1:10,0:10:0.01:1,0,0	0/1:11,0:11:26.36:32,0,26	0/0:18,0:18:10.89:0,11,131	0/1:7,0:7:0.84:1,0,23	0/1:8,1:9:17.83:53,0,18	1/1:5,1:6:3:29,3,0	1/1:15,2:17:3.61:35,4,0	1/1:6,0:6:1.11:6,1,0	1/1:5,0:5:0.89:2,1,0	1/1:10,2:12:1.73:6,2,0	1/1:12,0:12:27.88:160,28,0	0/1:4,0:4:5.76:6,0,13	1/1:12,1:13:2.72:47,3,0	0/0:3,0:3:5.85:0,6,36
chr10	84340911	.	TTTTGTTTGTTTG	T	2826.71	PASS	AB=0.640;AC=9;AF=0.161;AN=56;BaseQRankSum=6.503;DP=451;FS=23.822;HRun=0;HaplotypeScore=155.9879;InbreedingCoeff=0.8314;MQ=60.51;MQ0=1;MQRankSum=-5.429;QD=39.26;ReadPosRankSum=0.289;VQSLOD=1.7482;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:19:36.10:0,36,886	1/1:1,4:5:9.03:318,9,0	0/0:15,0:12:8.01:0,8,974	0/0:19,0:15:18.70:0,19,861	0/0:23,0:23:45.15:0,45,2309	0/0:18,0:18:39.13:0,39,1932	0/0:22,0:22:54.17:0,54,2760	0/0:27,0:27:57.14:0,57,2416	0/0:17,0:17:33.11:0,33,1855	1/1:6,12:18:27.05:634,27,0	1/1:1,11:12:26.96:667,27,0	0/0:14,0:14:27.02:0,27,1219	0/0:15,0:15:36.12:0,36,1877	0/0:9,0:9:24.08:0,24,1138	0/0:5,0:15:24.08:0,24,615	1/1:4,17:21:33.11:1091,33,0	0/1:6,9:16:15.35:279,0,15	0/0:15,0:15:24.46:0,24,1040	0/0:17,0:16:39.12:0,39,1693	0/0:17,0:17:42.14:0,42,2366	0/0:16,0:16:42.14:0,42,1917	0/0:13,0:13:30.10:0,30,1500	0/0:9,0:9:18.06:0,18,1055	0/0:25,0:25:63.20:0,63,3214	0/0:2,0:9:18.06:0,18,462	0/0:5,0:12:30.09:0,30,729	0/0:22,0:22:57.18:0,57,3005	0/0:1,0:10:27.09:0,27,692
chr10	84391300	.	ATACATG	A	5649.60	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.633;DP=661;FS=23.454;HRun=0;HaplotypeScore=139.2603;InbreedingCoeff=0.9720;MQ=80.76;MQ0=0;MQRankSum=-12.180;QD=47.88;ReadPosRankSum=1.897;VQSLOD=3.1251;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,4447	1/1:0,6:6:15.05:349,15,0	0/0:28,0:28:66.54:0,67,1979	0/0:26,0:26:63.21:0,63,2032	0/0:32,0:32:78.27:0,78,2604	0/0:18,0:18:51.18:0,51,1799	0/0:23,0:23:69.24:0,69,2311	0/0:46,0:46:99:0,117,3885	0/0:19,0:19:51.17:0,51,1750	1/1:3,19:22:60.18:1303,60,0	1/1:1,8:8:12.04:263,12,0	0/0:26,0:26:75.26:0,75,2500	0/0:19,0:19:57.18:0,57,1786	0/0:30,0:30:84.29:0,84,2817	0/0:21,0:21:60.19:0,60,1960	1/1:2,30:32:78.27:1814,78,0	1/1:3,26:29:48.16:1098,48,0	0/0:20,0:20:57.20:0,57,1949	0/0:22,0:22:60.19:0,60,1915	0/0:20,0:20:45.15:0,45,1587	0/0:39,0:39:99:0,114,3862	0/0:21,0:21:51.17:0,51,1671	0/0:20,0:20:54.17:0,54,1812	0/0:26,0:26:75.24:0,75,2341	0/0:17,0:17:39.13:0,39,1286	1/1:1,11:12:30.10:683,30,0	0/0:22,0:22:60.21:0,60,2077	1/1:1,7:8:6.02:140,6,0
chr10	84391570	.	G	GT	4996.70	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-11.929;DP=762;FS=0.346;HRun=6;HaplotypeScore=72.2075;InbreedingCoeff=0.9893;MQ=79.08;MQ0=0;MQRankSum=-3.631;QD=31.83;ReadPosRankSum=1.731;VQSLOD=5.1391;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:67,0:67:99:0,195,1990	1/1:2,15:17:48.11:585,48,0	0/0:25,0:25:62.05:0,62,589	0/0:18,0:18:45.04:0,45,436	0/0:21,0:21:60.11:0,60,604	0/0:16,0:16:48.11:0,48,489	0/0:13,0:13:33.06:0,33,330	0/0:34,0:34:90.19:0,90,913	0/0:30,0:30:78.17:0,78,796	1/1:7,23:30:72.23:902,72,0	1/1:1,17:18:39.12:490,39,0	0/0:28,0:28:81.18:0,81,826	0/0:23,0:23:63.11:0,63,633	0/0:38,0:38:99:0,105,1071	0/0:40,0:40:99:0,114,1163	1/1:2,27:29:72.23:906,72,0	1/1:3,29:32:81.26:1019,81,0	0/0:32,0:32:84.15:0,84,846	0/0:22,0:22:57.12:0,57,581	0/0:19,0:19:48.10:0,48,489	0/0:41,0:41:99:0,111,1131	0/0:28,0:28:75.15:0,75,759	0/0:29,0:29:81.17:0,81,825	0/0:31,0:31:81.16:0,81,819	0/0:20,0:20:54.12:0,54,551	1/1:0,26:26:78.25:981,78,0	0/0:30,0:30:81.15:0,81,816	1/1:2,3:5:9.03:113,9,0
chr10	84392011	.	C	CTAACCACAGGCCAAACCAGTG	76097.12	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=3.261;DP=651;FS=4.559;HRun=0;HaplotypeScore=318.5800;InbreedingCoeff=0.9998;MQ=70.37;MQ0=0;MQRankSum=-18.859;QD=185.15;ReadPosRankSum=-1.399;VQSLOD=3.8029;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,3:27:54.14:3934,54,0	1/1:8,2:12:27.56:2408,28,0	0/0:19,0:19:48.16:0,48,2327	0/0:17,0:17:48.12:0,48,2136	0/0:17,0:17:51.16:0,51,2599	0/0:24,0:24:72.23:0,72,3940	1/1:22,4:32:78.20:6203,78,0	1/1:41,0:43:99:7032,126,0	0/0:17,0:17:51.16:0,51,2689	1/1:27,5:33:93.32:6460,93,0	1/1:21,5:26:63.10:4983,63,0	0/0:23,0:23:69.23:0,69,3602	0/0:29,0:29:84.23:0,84,3793	0/0:20,0:20:57.17:0,57,2851	1/1:11,3:16:39.13:3281,39,0	1/1:17,1:22:47.84:3562,48,0	1/1:10,8:25:45.15:4136,45,0	0/0:10,0:10:30.10:0,30,1672	1/1:16,3:22:66.10:3842,66,0	1/1:20,3:23:66.23:4683,66,0	1/1:18,2:24:48.12:2909,48,0	0/0:21,0:21:63.19:0,63,3092	0/0:24,0:24:69.21:0,69,3573	0/0:19,0:19:54.19:0,54,3089	1/1:10,11:25:63.22:5528,63,0	1/1:21,6:33:96.27:7037,96,0	1/1:16,8:31:72.21:5644,72,0	1/1:8,9:17:48.16:4456,48,0
chr10	84392799	.	C	CT	609.93	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-4.305;DP=603;FS=0.000;HRun=10;HaplotypeScore=59.8459;InbreedingCoeff=0.6891;MQ=69.65;MQ0=1;MQRankSum=0.579;QD=15.25;ReadPosRankSum=0.999;VQSLOD=3.7551;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:95.86:0,96,788	0/0:12,0:12:29.95:0,30,246	0/1:13,0:14:4.99:5,0,95	0/0:11,1:10:13.81:0,14,99	0/0:28,0:27:62.30:0,62,555	0/0:29,2:31:39.88:0,40,534	0/0:24,0:24:50.90:0,51,418	0/0:26,0:27:70.93:0,71,567	0/0:6,0:6:17.98:0,18,148	0/0:26,0:26:53.90:0,54,440	0/0:20,0:20:44.90:0,45,365	0/0:18,1:19:18.95:0,19,361	0/0:16,0:16:44.91:0,45,365	0/0:25,0:27:67.94:0,68,547	0/0:18,0:18:27.35:0,27,349	0/0:20,0:20:46.75:0,47,375	0/0:21,1:22:24.94:0,25,411	0/0:30,0:30:86.90:0,87,714	0/0:24,0:25:48.19:0,48,462	0/0:26,0:26:59.88:0,60,493	0/0:13,0:13:26.94:0,27,222	0/0:11,0:11:29.96:0,30,246	0/0:18,0:18:47.93:0,48,394	0/0:21,0:21:50.92:0,51,419	1/1:2,24:26:66.17:704,66,0	0/0:30,0:30:53.82:0,54,439	0/0:29,0:29:77.89:0,78,640	0/0:11,0:11:32.96:0,33,271
chr10	84393470	.	CGGGGGGGG	C	1182.65	PASS	AB=0.917;AC=3;AF=0.054;AN=56;BaseQRankSum=4.256;DP=377;FS=4.763;HRun=13;HaplotypeScore=98.9880;InbreedingCoeff=0.4693;MQ=77.38;MQ0=0;MQRankSum=-5.382;QD=26.28;ReadPosRankSum=5.211;VQSLOD=0.5358;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:34:54.16:1271,54,0	0/0:4,0:4:9.03:0,9,323	0/1:10,0:9:15.94:16,0,195	0/0:15,0:15:18.51:0,19,366	0/0:11,0:11:9.01:0,9,254	0/0:13,0:13:23.18:0,23,608	0/0:11,0:12:18.93:0,19,380	0/0:10,0:12:19.25:0,19,277	0/0:14,0:14:24.45:0,24,660	0/0:9,0:10:15.04:0,15,394	0/0:7,0:8:15.03:0,15,301	0/0:21,0:21:33.19:0,33,946	0/0:11,0:11:12.16:0,12,383	0/0:16,0:16:24.04:0,24,781	0/0:15,0:15:24.54:0,25,873	0/0:5,0:10:6.02:0,6,228	0/0:22,0:22:48.15:0,48,1698	0/0:12,0:12:18.03:0,18,629	0/0:13,0:14:27.07:0,27,581	0/0:11,0:11:18.05:0,18,309	0/0:11,0:12:14.99:0,15,229	0/0:9,0:9:14.98:0,15,395	0/0:11,0:11:20.99:0,21,635	0/0:19,0:19:29.66:0,30,1213	0/0:11,0:11:12.04:0,12,358	0/0:12,0:12:22.30:0,22,286	0/0:17,0:17:20.65:0,21,499	0/0:9,0:9:6.02:0,6,159
chr10	84395507	.	A	AAC	3096.14	PASS	AB=0.844;AC=13;AF=0.232;AN=56;BaseQRankSum=-4.638;DP=558;FS=8.689;HRun=0;HaplotypeScore=79.6161;InbreedingCoeff=0.6881;MQ=63.46;MQ0=5;MQRankSum=-0.930;QD=22.27;ReadPosRankSum=-0.324;VQSLOD=3.7205;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:88.06:0,88,1057	0/1:1,7:8:15.33:269,0,15	0/0:44,0:23:32.27:0,32,307	0/0:36,0:28:46.58:0,47,447	0/0:21,0:21:60.17:0,60,715	0/0:15,0:15:29.91:0,30,332	0/0:14,0:14:30.09:0,30,364	0/0:38,0:38:78.23:0,78,937	0/0:22,0:22:40.31:0,40,517	1/1:4,18:22:54.18:855,54,0	1/1:2,11:14:33.11:508,33,0	0/0:17,0:18:47.94:0,48,559	0/0:17,0:17:42.12:0,42,502	0/0:14,0:14:38.99:0,39,451	0/0:18,0:18:51.16:0,51,619	1/1:1,20:20:48.16:775,48,0	1/1:4,20:26:8.48:584,8,0	0/0:31,0:31:66.71:0,67,805	0/0:23,0:21:48.13:0,48,556	0/0:16,0:16:36.11:0,36,432	0/0:11,0:11:30.07:0,30,343	0/0:7,0:7:15.03:0,15,170	0/0:7,0:7:18.05:0,18,218	0/0:9,0:9:27.04:0,27,311	1/1:9,0:19:14.74:117,15,0	0/1:21,0:21:52.21:112,0,52	0/0:23,0:24:47.96:0,48,547	0/1:8,0:7:11.32:56,0,11
chr10	84395525	.	A	AAC	588.99	PASS	AB=0.855;AC=3;AF=0.054;AN=56;BaseQRankSum=2.347;DP=593;FS=1.610;HRun=0;HaplotypeScore=84.2826;InbreedingCoeff=0.0215;MQ=58.80;MQ0=7;MQRankSum=-4.387;QD=12.53;ReadPosRankSum=-1.040;VQSLOD=3.2332;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,111,1338	0/0:8,0:8:8.89:0,9,53	0/0:49,0:22:22.73:0,23,264	0/0:43,0:27:33.10:0,33,470	0/0:23,0:23:65.93:0,66,800	0/0:14,0:14:39.12:0,39,488	0/0:13,0:13:33.11:0,33,420	0/0:34,0:34:81.24:0,81,1007	0/0:19,0:19:51.11:0,51,607	0/0:24,0:24:43.60:0,44,296	0/1:13,0:13:14.20:14,0,55	0/0:20,0:20:57.65:0,58,724	0/0:18,0:18:42.02:0,42,522	0/0:18,0:18:51.16:0,51,641	0/0:19,0:19:54.15:0,54,660	0/0:20,0:19:21.07:0,21,77	0/0:32,0:32:30.19:0,30,339	0/0:27,0:27:64.61:0,65,834	0/0:24,0:22:51.14:0,51,620	0/0:17,0:17:48.13:0,48,595	0/0:9,0:9:21.07:0,21,267	0/0:5,0:5:12.04:0,12,153	0/0:14,0:14:42.09:0,42,502	0/0:10,0:10:24.06:0,24,289	0/0:19,0:19:18.84:0,19,264	0/1:21,5:26:32.85:504,0,33	0/0:24,0:24:66.18:0,66,820	0/1:5,3:7:8.23:169,0,8
chr10	84395783	.	T	TG	258.30	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.751;DP=241;FS=1.312;HRun=4;HaplotypeScore=28.4626;InbreedingCoeff=0.6832;MQ=64.58;MQ0=6;MQRankSum=1.940;QD=19.87;ReadPosRankSum=1.279;VQSLOD=2.3550;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,6:9:18.06:246,18,0	0/0:2,0:2:6.02:0,6,68	0/0:16,0:5:12.03:0,12,132	0/0:20,0:10:21.03:0,21,217	0/0:4,0:4:12.03:0,12,136	0/0:5,0:5:12.03:0,12,136	0/0:9,0:9:24.54:0,25,273	0/0:9,0:9:21.06:0,21,238	0/0:11,0:11:23.99:0,24,272	0/0:4,0:4:12.02:0,12,128	0/0:2,0:2:6.02:0,6,68	0/0:13,0:13:36.10:0,36,407	0/0:4,0:4:12.02:0,12,124	0/0:9,0:9:21.06:0,21,238	0/0:6,0:6:12.03:0,12,133	0/0:7,0:7:15.04:0,15,170	0/0:12,0:12:30.08:0,30,340	0/0:8,0:8:22.61:0,23,241	0/0:5,0:4:3.01:0,3,34	0/0:9,0:9:24.07:0,24,271	0/0:29,0:28:69.19:0,69,776	0/0:8,0:7:12.03:0,12,136	0/0:5,0:5:12.03:0,12,136	0/0:11,0:11:30.05:0,30,314	1/1:0,4:4:9.03:123,9,0	0/0:7,0:7:17.94:0,18,204	0/0:9,0:9:21.06:0,21,238	0/0:4,0:4:10.58:0,11,106
chr10	84396899	.	C	CTT	2578.08	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.669;DP=780;FS=20.912;HRun=1;HaplotypeScore=96.4670;InbreedingCoeff=0.9995;MQ=82.97;MQ0=0;MQRankSum=-1.904;QD=50.55;ReadPosRankSum=1.083;VQSLOD=2.3821;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,156,2315	0/0:11,0:11:30.09:0,30,438	0/0:31,0:31:31.19:0,31,992	0/0:24,0:24:60.01:0,60,799	0/0:23,0:23:66.18:0,66,946	0/0:20,0:20:57.17:0,57,841	0/0:42,0:42:99:0,114,1707	0/0:26,0:26:69.23:0,69,1054	0/0:19,0:19:57.19:0,57,871	0/0:27,0:27:78.25:0,78,1159	0/0:15,0:15:36.11:0,36,529	0/0:31,0:31:84.27:0,84,1263	0/0:20,0:20:57.17:0,57,842	0/0:29,0:29:81.26:0,81,1215	0/0:37,0:37:99:0,108,1607	0/0:28,0:28:81.26:0,81,1215	0/0:32,0:32:90.29:0,90,1355	0/0:24,0:24:72.24:0,72,1101	0/0:23,0:23:66.13:0,66,918	0/0:27,0:27:75.25:0,75,1144	0/0:59,0:59:99:0,172,2588	0/0:24,0:24:66.22:0,66,1004	0/0:26,0:26:75.24:0,75,1121	0/0:36,0:36:99:0,102,1517	0/0:26,0:26:75.25:0,75,1142	1/1:1,32:35:96.29:1809,96,0	0/0:16,0:16:48.13:0,48,690	1/1:1,15:16:48.14:891,48,0
chr10	84397226	.	T	TCCA	1503.13	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.425;DP=672;FS=1.700;HRun=0;HaplotypeScore=96.2168;InbreedingCoeff=0.9934;MQ=78.55;MQ0=0;MQRankSum=-2.679;QD=55.67;ReadPosRankSum=1.228;VQSLOD=5.6142;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,117,1967	0/0:8,0:8:21.07:0,21,354	0/0:12,0:12:24.08:0,24,386	0/0:20,0:20:35.68:0,36,416	0/0:22,0:22:60.19:0,60,993	0/0:19,0:19:57.20:0,57,972	0/0:38,0:38:99:0,102,1710	0/0:17,0:17:45.15:0,45,768	0/0:24,0:24:69.22:0,69,1149	0/0:20,0:20:57.19:0,57,971	0/0:9,0:9:27.08:0,27,432	0/0:36,0:36:99:0,105,1759	0/0:29,0:29:81.26:0,81,1349	0/0:35,0:35:99:0,99,1633	0/0:35,0:35:99:0,102,1714	0/0:25,0:25:72.25:0,72,1224	0/0:32,0:32:96.29:0,96,1583	0/0:15,0:15:45.15:0,45,767	0/0:24,0:24:69.19:0,69,1100	0/0:11,0:11:30.08:0,30,482	0/0:42,0:42:99:0,123,2095	0/0:17,0:17:51.17:0,51,853	0/0:24,0:24:66.23:0,66,1126	0/0:48,0:48:99:0,138,2327	0/0:23,0:22:60.21:0,60,1023	1/1:4,12:18:21.18:1002,21,0	0/0:17,0:17:48.12:0,48,762	1/1:0,9:9:27.09:621,27,0
chr10	84397658	.	TGAGAGAGAGA	T	513.80	PASS	AB=0.847;AC=5;AF=0.093;AN=54;BaseQRankSum=2.481;DP=521;FS=6.525;HRun=0;HaplotypeScore=145.4829;InbreedingCoeff=0.0922;MQ=66.48;MQ0=4;MQRankSum=-0.356;QD=5.41;ReadPosRankSum=-0.792;VQSLOD=2.2137;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:30.55:0,31,967	0/0:4,0:4:6.01:0,6,120	./.	0/0:26,0:15:0:0,0,0	0/0:18,0:17:11.97:0,12,324	0/0:21,0:21:14.95:0,15,358	0/1:15,0:19:45.33:45,0,49	0/0:22,0:22:15:0,15,90	0/0:20,0:20:24.07:0,24,820	0/0:17,0:26:31.55:0,32,870	0/0:12,0:12:8.95:0,9,191	0/0:16,0:16:18.01:0,18,547	0/0:11,0:12:7.58:0,8,220	0/0:18,0:18:17.89:0,18,650	0/0:16,0:16:7.89:0,8,291	0/0:16,0:20:15.51:0,16,421	0/0:14,0:13:11.99:0,12,204	0/0:14,0:13:18.04:0,18,626	0/1:21,0:21:27.16:27,0,31	0/1:11,7:19:7.04:287,0,7	0/1:17,0:16:13.77:14,0,52	0/0:17,0:17:11.96:0,12,134	0/0:12,0:12:6.02:0,6,161	0/0:27,0:29:38.96:0,39,1065	0/0:15,0:16:9.50:0,10,400	0/0:23,0:23:38.99:0,39,911	0/1:11,8:19:2.19:254,0,2	0/0:11,0:11:12:0,12,272
chr10	84397705	.	G	GAA	844.07	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=5.922;DP=687;FS=1.300;HRun=1;HaplotypeScore=111.4280;InbreedingCoeff=0.6654;MQ=59.80;MQ0=11;MQRankSum=-4.652;QD=10.29;ReadPosRankSum=-2.703;VQSLOD=-0.4652;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:49,3:48:53.09:881,53,0	0/0:3,0:3:8.95:0,9,69	0/0:25,0:14:27.97:0,28,225	0/0:33,0:15:44.88:0,45,458	0/0:30,0:30:53.88:0,54,452	0/0:23,0:23:35.73:0,36,318	0/0:25,0:25:56.80:0,57,456	0/0:44,0:43:99:0,102,855	0/0:25,0:25:53.01:0,53,481	0/0:31,0:31:72.58:0,73,647	0/0:17,0:17:22.39:0,22,197	0/1:10,0:10:15.24:15,0,118	0/0:13,0:13:16.26:0,16,211	0/0:22,0:22:42.09:0,42,407	0/0:27,0:26:57.12:0,57,470	0/0:29,0:29:59.66:0,60,514	0/0:18,0:17:34.92:0,35,267	0/0:20,0:18:8.85:0,9,216	0/0:24,0:23:54.05:0,54,441	0/0:23,0:23:46.65:0,47,360	0/0:28,0:28:64.69:0,65,530	0/0:23,0:23:34.04:0,34,277	0/0:22,0:22:40.25:0,40,366	0/0:36,0:36:77.59:0,78,686	1/1:5,13:20:4.12:66,4,0	0/0:25,0:24:65.77:0,66,555	0/0:22,0:22:38.86:0,39,308	0/0:17,0:16:45.53:0,46,333
chr10	84398065	.	C	CT	5116.12	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-11.267;DP=632;FS=3.244;HRun=2;HaplotypeScore=59.6219;InbreedingCoeff=0.9995;MQ=65.13;MQ0=0;MQRankSum=-1.056;QD=34.57;ReadPosRankSum=2.839;VQSLOD=5.3408;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,41:43:90.31:1365,90,0	0/0:10,0:10:30.07:0,30,355	0/0:17,0:15:27.04:0,27,309	0/0:16,0:13:30.01:0,30,312	0/0:19,0:19:57.14:0,57,657	0/0:20,0:20:57.10:0,57,638	0/0:26,0:26:75.14:0,75,881	0/0:31,0:31:90.25:0,90,1072	0/0:19,0:19:57.18:0,57,704	0/0:22,0:22:66.15:0,66,777	0/0:23,0:23:63.17:0,63,743	0/0:25,0:25:70.44:0,70,831	0/0:13,0:13:39.07:0,39,443	0/0:15,0:15:45.13:0,45,537	1/1:0,25:25:63.21:899,63,0	0/0:24,0:24:69.15:0,69,783	0/0:25,0:25:72.18:0,72,860	0/0:29,0:28:84.14:0,84,965	0/0:20,0:20:51.12:0,51,602	0/0:25,0:25:72.19:0,72,853	0/0:21,0:21:60.17:0,60,727	0/0:22,0:22:66.10:0,66,759	0/0:19,0:19:51.13:0,51,611	0/0:19,0:19:50.69:0,51,572	1/1:0,28:28:66.22:946,66,0	1/1:1,32:33:96.27:1304,96,0	0/0:24,0:24:72.18:0,72,848	1/1:0,19:19:42.14:602,42,0
chr10	84398774	.	C	CG	1589.96	PASS	AB=0.944;AC=22;AF=0.423;AN=52;BaseQRankSum=8.056;DP=366;FS=14.084;HRun=0;HaplotypeScore=57.0426;InbreedingCoeff=0.7846;MQ=40.38;MQ0=63;MQRankSum=-4.069;QD=10.97;ReadPosRankSum=3.294;VQSLOD=2.8500;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,10:15:29.79:329,30,0	1/1:2,4:5:5.79:67,6,0	./.	./.	0/0:13,0:10:21.05:0,21,262	0/0:9,0:9:18.52:0,19,191	0/0:14,0:11:17.85:0,18,204	0/0:20,0:9:22.45:0,22,192	0/0:12,0:11:21.03:0,21,243	1/1:1,3:4:9.02:106,9,0	1/1:2,9:11:14.75:209,15,0	0/0:15,0:13:27.01:0,27,304	0/0:13,0:10:30.05:0,30,337	0/1:7,1:8:24.70:25,0,183	1/1:2,5:7:9.03:125,9,0	1/1:4,12:16:17.85:213,18,0	1/1:15,14:22:15.05:205,15,0	0/0:17,0:13:26.95:0,27,324	0/0:18,0:12:24.49:0,24,288	0/0:13,0:12:30:0,30,304	0/0:10,0:8:21.03:0,21,228	0/0:12,0:12:24.53:0,25,291	0/0:9,0:5:11.97:0,12,100	0/1:12,0:8:1.81:2,0,135	1/1:1,1:2:3:25,3,0	1/1:5,7:11:30.04:364,30,0	0/0:19,0:17:42.06:0,42,475	1/1:12,3:6:9.03:118,9,0
chr10	84398784	.	A	ACC	1009.72	PASS	AB=0.895;AC=12;AF=0.222;AN=54;BaseQRankSum=6.085;DP=407;FS=28.741;HRun=0;HaplotypeScore=60.2454;InbreedingCoeff=0.2071;MQ=34.18;MQ0=88;MQRankSum=-5.509;QD=7.37;ReadPosRankSum=3.645;VQSLOD=1.3200;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:25,2:15:10.28:181,0,10	0/1:4,0:2:11.59:12,0,14	0/0:21,0:1:3.01:0,3,37	./.	0/0:15,0:9:23.33:0,23,252	0/0:8,0:8:18.95:0,19,259	0/0:16,0:14:35.90:0,36,455	0/0:27,0:16:40.07:0,40,428	0/0:11,0:10:27.09:0,27,398	0/1:6,0:5:13.25:29,0,13	0/1:10,2:12:58.71:159,0,59	0/0:13,0:11:21.94:0,22,284	0/0:10,0:6:16.30:0,16,214	0/0:7,0:6:18.03:0,18,212	0/1:3,1:4:23.38:28,0,23	0/1:6,4:10:28.47:157,0,28	0/1:25,5:23:99:192,0,103	0/0:21,0:17:39.09:0,39,510	0/0:26,0:19:54.11:0,54,657	0/0:10,0:8:24.08:0,24,325	0/0:10,0:7:13.39:0,13,165	0/0:9,0:9:21.52:0,22,268	0/0:10,0:5:14.92:0,15,188	0/0:17,0:11:19.10:0,19,220	0/1:7,0:6:0.01:17,0,0	1/1:11,0:9:15.78:222,16,0	0/0:11,0:9:15.01:0,15,191	1/1:25,1:12:13.54:170,14,0
chr10	84398790	.	A	ACC	102.65	PASS	AB=0.926;AC=4;AF=0.074;AN=54;BaseQRankSum=-1.352;DP=450;FS=11.143;HRun=0;HaplotypeScore=53.3800;InbreedingCoeff=0.3123;MQ=34.97;MQ0=92;MQRankSum=-2.671;QD=1.47;ReadPosRankSum=-1.009;VQSLOD=0.1739;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:21:54.58:55,0,103	0/0:4,0:2:5.98:0,6,57	0/0:28,0:1:3.01:0,3,33	./.	0/0:16,0:10:22.83:0,23,239	0/0:9,0:9:24.02:0,24,304	0/0:16,0:14:36.07:0,36,502	0/0:30,0:19:46.05:0,46,560	0/0:11,0:10:26.30:0,26,362	0/0:9,0:8:17.89:0,18,229	0/0:15,0:14:32.80:0,33,317	0/0:11,0:9:18.06:0,18,246	0/0:10,0:6:18.06:0,18,247	0/0:5,0:4:12.02:0,12,142	0/0:4,0:4:9.02:0,9,111	0/0:11,0:11:23.79:0,24,257	0/0:34,0:27:48.31:0,48,518	0/0:19,0:15:36.09:0,36,461	0/0:26,0:18:51.17:0,51,700	0/0:10,0:8:24.08:0,24,349	0/0:11,0:8:21.05:0,21,261	0/0:5,0:5:15.04:0,15,188	0/0:11,0:6:18.06:0,18,256	0/0:17,0:11:22:0,22,269	1/1:8,0:7:8.68:54,9,0	0/0:19,0:16:42.92:0,43,395	0/0:14,0:12:17.95:0,18,209	0/1:24,5:14:99:101,0,171
chr10	84398983	.	GATAAATAA	G	724.30	PASS	AC=12;AF=0.250;AN=48;BaseQRankSum=3.331;DP=237;FS=0.000;HRun=0;HaplotypeScore=59.4262;InbreedingCoeff=0.4829;MQ=54.98;MQ0=3;MQRankSum=-2.968;QD=11.87;ReadPosRankSum=2.191;VQSLOD=1.5660;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,3:9:2.99:0,3,24	0/0:5,0:5:9.03:0,9,368	./.	./.	0/0:3,0:3:3.01:0,3,45	0/0:7,0:7:15.05:0,15,613	0/0:4,0:4:6.01:0,6,80	0/0:33,0:30:15.03:0,15,216	0/0:8,0:8:12.04:0,12,488	1/1:3,3:6:9.03:222,9,0	1/1:9,0:9:3.01:74,3,0	./.	0/0:5,0:5:3.01:0,3,123	0/0:4,0:4:3.01:0,3,123	0/0:3,0:3:3.01:0,3,93	1/1:5,2:7:3.01:75,3,0	1/1:16,5:21:1.18:71,1,0	0/0:18,0:16:33.11:0,33,1282	0/0:13,0:14:5.99:0,6,49	0/0:2,0:3:2.99:0,3,24	0/0:4,0:7:2.99:0,3,24	./.	0/0:1,0:1:3.01:0,3,123	0/0:5,0:5:3.01:0,3,95	0/0:4,0:7:9.03:0,9,314	1/1:3,0:6:8.06:142,8,0	0/0:6,0:9:8.98:0,9,73	1/1:5,0:12:15.05:278,15,0
chr10	84400234	.	A	AAG	760.40	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.659;DP=777;FS=7.471;HRun=0;HaplotypeScore=120.4704;InbreedingCoeff=0.5782;MQ=56.47;MQ0=10;MQRankSum=1.779;QD=18.55;ReadPosRankSum=1.802;VQSLOD=3.7406;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,29:41:1:836,1,0	0/0:16,0:16:24.31:0,24,208	0/0:29,0:3:9.03:0,9,127	0/0:28,0:8:11.53:0,12,102	0/0:24,0:24:63.51:0,64,884	0/0:19,0:19:57.19:0,57,895	0/0:37,0:36:99:0,111,1664	0/0:25,0:24:63.21:0,63,964	0/0:31,0:31:86.81:0,87,1345	0/0:18,0:18:49.28:0,49,494	0/0:5,0:5:9.34:0,9,70	0/0:50,0:50:99:0,147,2251	0/0:35,0:35:99:0,103,1460	0/0:32,0:32:93.32:0,93,1435	0/0:34,0:33:57.02:0,57,407	0/0:33,0:33:66.60:0,67,589	0/0:34,0:34:55.22:0,55,622	0/0:12,0:11:27.09:0,27,398	0/0:21,0:21:53.32:0,53,724	0/0:18,0:18:51.12:0,51,756	0/0:72,0:71:99:0,205,2960	0/0:26,0:26:75.26:0,75,1183	0/0:17,0:17:48.14:0,48,730	0/0:48,0:48:99:0,135,2107	0/0:17,0:17:32.73:0,33,319	0/0:24,0:24:50.18:0,50,606	0/0:22,0:22:66.19:0,66,983	0/0:9,0:9:14.12:0,14,147
chr10	84400236	.	G	GCACACA	4905.25	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=0.716;DP=812;FS=4.386;HRun=0;HaplotypeScore=170.3323;InbreedingCoeff=0.8915;MQ=56.00;MQ0=11;MQRankSum=-10.000;QD=19.47;ReadPosRankSum=-4.824;VQSLOD=3.6359;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:20.38:0,20,212	1/1:4,11:16:17.34:589,17,0	1/1:31,0:3:2.98:22,3,0	./.	0/0:20,0:23:36.68:0,37,615	0/0:17,0:19:45.15:0,45,899	0/0:35,0:37:63.13:0,63,1110	0/0:24,0:23:24:0,24,292	0/0:27,0:31:56.61:0,57,1038	1/1:7,11:20:36.03:698,36,0	1/1:2,3:5:6.02:197,6,0	0/0:50,0:51:99:0,105,2042	0/0:31,0:35:64.05:0,64,1120	0/0:31,0:33:63.18:0,63,1117	1/1:34,0:33:48.06:750,48,0	1/1:10,19:36:51.27:1549,51,0	1/1:15,16:35:15.05:373,15,0	0/0:7,0:11:21.03:0,21,334	0/0:18,0:20:0.96:0,1,202	0/0:19,0:19:33.07:0,33,624	0/0:67,0:71:99:0,112,2243	0/0:25,0:27:60.16:0,60,1084	0/0:15,0:16:36.12:0,36,712	0/0:50,0:50:99:0,99,1888	1/1:7,0:27:15.05:363,15,0	1/1:9,0:32:10.90:208,11,0	0/0:22,0:22:47.52:0,48,791	1/1:3,0:16:6.02:157,6,0
chr10	84400261	.	C	CACACA	3123.79	PASS	AB=0.994;AC=10;AF=0.179;AN=56;BaseQRankSum=10.017;DP=755;FS=0.000;HRun=0;HaplotypeScore=153.6179;InbreedingCoeff=0.0260;MQ=65.70;MQ0=11;MQRankSum=-11.257;QD=17.45;ReadPosRankSum=3.848;VQSLOD=3.0463;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:92.69:0,93,892	0/1:13,0:13:99:292,0,100	0/0:37,0:19:54.99:0,55,691	0/0:26,0:16:41.91:0,42,538	0/0:22,0:22:50.66:0,51,881	0/0:18,0:18:48.16:0,48,1045	0/0:35,0:34:30.73:0,31,1762	0/0:23,0:22:60.16:0,60,927	0/0:32,0:33:59.93:0,60,1556	0/1:16,0:16:99:224,0,263	0/1:6,0:6:88.92:89,0,142	0/0:50,0:50:99:0,141,2836	0/0:33,0:33:98.80:0,99,1785	0/0:29,0:29:81.26:0,81,1582	1/1:1,27:35:48.16:1238,48,0	0/1:35,0:35:99:735,0,289	0/1:20,0:20:99:291,0,182	0/0:12,0:11:30.10:0,30,535	0/0:18,0:18:53.59:0,54,728	0/0:15,0:15:42.14:0,42,848	0/0:71,0:70:99:0,201,3597	0/0:28,0:28:84.22:0,84,1521	0/0:17,0:17:51.17:0,51,1009	0/0:42,0:41:99:0,126,2569	0/1:18,0:19:96.06:240,0,96	0/1:21,0:21:66.32:66,0,428	0/0:25,0:25:69.23:0,69,1329	0/1:10,0:10:99:100,0,105
chr10	84400465	.	TA	T	524.85	PASS	AB=0.875;AC=3;AF=0.054;AN=56;BaseQRankSum=7.032;DP=573;FS=3.076;HRun=10;HaplotypeScore=62.8803;InbreedingCoeff=0.6031;MQ=68.49;MQ0=0;MQRankSum=0.012;QD=11.66;ReadPosRankSum=1.868;VQSLOD=3.2086;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,31:38:44.78:618,45,0	0/0:7,0:7:21.06:0,21,232	0/0:14,0:14:27.71:0,28,333	0/1:6,1:6:8.16:8,0,113	0/0:19,1:20:28.10:0,28,529	0/0:19,0:19:42.10:0,42,456	0/0:18,0:18:48.11:0,48,514	0/0:16,0:16:39.11:0,39,431	0/0:15,0:15:39.11:0,39,431	0/0:25,0:26:57.15:0,57,624	0/0:11,0:11:4.02:0,4,264	0/0:27,2:29:17.04:0,17,631	0/0:18,0:18:54.13:0,54,589	0/0:15,0:15:42.08:0,42,446	0/0:25,1:27:51.97:0,52,769	0/0:23,0:23:54.13:0,54,583	0/0:20,1:21:22.07:0,22,464	0/0:15,0:15:33.09:0,33,365	0/0:21,0:21:51.14:0,51,564	0/0:22,0:22:51.12:0,51,548	0/0:29,1:31:57.96:0,58,829	0/0:26,1:28:39.95:0,40,645	0/0:23,0:23:63:0,63,664	0/0:29,2:31:32.12:0,32,803	0/0:10,0:11:24.37:0,24,248	0/0:9,0:26:54.60:0,55,319	0/0:28,1:30:54.95:0,55,791	0/0:1,0:11:25.72:0,26,137
chr10	84400570	.	C	CA	2277.49	PASS	AB=0.848;AC=22;AF=0.393;AN=56;BaseQRankSum=2.467;DP=559;FS=0.405;HRun=12;HaplotypeScore=67.4608;InbreedingCoeff=0.6935;MQ=58.85;MQ0=19;MQRankSum=-2.063;QD=9.33;ReadPosRankSum=-1.507;VQSLOD=2.4555;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,2:32:57:305,57,0	1/1:2,3:6:10.35:99,10,0	0/0:12,0:7:10.52:0,11,83	0/1:6,0:5:29.40:51,0,29	0/0:27,0:27:49.69:0,50,356	0/0:15,0:15:35.79:0,36,263	0/1:11,2:13:13.07:13,0,90	0/0:28,0:24:40.74:0,41,290	0/1:9,1:10:8.32:8,0,110	1/1:10,14:24:25.86:380,26,0	0/1:3,5:8:9.89:75,0,10	0/0:22,0:22:9.86:0,10,287	0/0:20,2:22:15.32:0,15,260	0/0:15,0:15:29.76:0,30,217	1/1:10,0:23:22.83:118,23,0	1/1:3,18:22:32.69:345,33,0	1/1:6,21:25:50.61:461,51,0	0/0:20,0:19:32.76:0,33,241	0/0:22,0:22:49.68:0,50,341	0/0:21,0:20:53.69:0,54,394	0/0:18,0:20:39.83:0,40,273	0/0:18,0:16:38.74:0,39,283	0/0:17,0:17:30.39:0,30,222	0/0:24,2:27:25.95:0,26,348	1/1:4,10:14:12.02:117,12,0	1/1:11,2:31:59.34:317,59,0	0/0:21,0:19:43.31:0,43,297	1/1:4,1:17:34.51:198,35,0
chr10	84400938	.	GA	G	1358.22	PASS	AB=0.796;AC=7;AF=0.125;AN=56;BaseQRankSum=8.960;DP=763;FS=10.501;HRun=11;HaplotypeScore=85.4083;InbreedingCoeff=0.5013;MQ=70.12;MQ0=0;MQRankSum=-0.825;QD=11.22;ReadPosRankSum=1.713;VQSLOD=2.3463;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,3:52:85.85:0,86,1125	0/0:10,0:10:27.07:0,27,288	0/1:18,2:19:58.57:59,0,136	0/1:19,2:19:36.10:36,0,133	0/0:20,0:22:50.75:0,51,479	0/0:19,1:21:26.32:0,26,470	0/0:26,0:27:56.55:0,57,696	0/0:30,1:31:47.52:0,48,700	0/0:28,0:28:78.18:0,78,822	0/0:32,2:35:37.76:0,38,792	0/0:24,1:25:38.51:0,39,613	0/0:40,0:42:99:0,108,1105	0/0:21,1:25:32.32:0,32,514	0/0:24,0:25:59.13:0,59,599	1/1:3,33:36:57.91:682,58,0	0/0:44,1:45:98.64:0,99,1235	0/0:18,0:18:48.10:0,48,501	0/0:15,0:15:30.05:0,30,310	0/0:19,1:20:14.33:0,14,324	0/0:30,1:31:56.41:0,56,777	0/0:20,0:22:53.97:0,54,558	0/0:34,1:36:52.61:0,53,770	0/0:25,0:25:52.29:0,52,629	0/0:27,2:29:25.86:0,26,673	0/0:28,0:29:62.98:0,63,646	0/1:7,25:32:12.10:527,0,12	0/0:25,3:29:7.17:0,7,653	1/1:3,8:11:23.96:197,24,0
chr10	84401785	.	AG	A	1013.57	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.253;DP=638;FS=31.511;HRun=4;HaplotypeScore=65.0766;InbreedingCoeff=0.9569;MQ=88.64;MQ0=0;MQRankSum=-2.054;QD=26.67;ReadPosRankSum=0.175;VQSLOD=1.5486;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,34:38:99:1108,99,0	0/0:16,0:16:45.13:0,45,610	0/0:26,0:26:72.10:0,72,968	0/0:22,0:22:10.31:0,10,654	0/0:18,0:18:54.15:0,54,719	0/0:14,0:14:42.14:0,42,588	0/0:29,0:29:84.17:0,84,1099	0/0:23,0:23:66.19:0,66,874	0/0:19,0:19:57.18:0,57,781	0/0:21,0:21:63.20:0,63,861	0/0:17,0:17:51.17:0,51,714	0/0:32,0:32:96.32:0,96,1344	0/0:25,0:25:75.25:0,75,1050	0/0:41,0:41:99:0,120,1680	0/0:29,0:29:81.27:0,81,1134	0/0:26,0:26:72.23:0,72,993	0/0:39,0:39:99:0,117,1622	0/0:17,0:17:51.17:0,51,714	0/0:18,0:18:45.13:0,45,598	0/0:15,0:15:45.14:0,45,611	0/0:37,0:37:99:0,108,1468	0/0:17,0:17:48.16:0,48,666	0/0:10,0:10:30.10:0,30,420	0/0:18,0:18:54.15:0,54,722	0/0:15,0:15:42.14:0,42,587	0/0:15,0:15:45.14:0,45,615	0/0:21,0:21:63.21:0,63,881	0/0:20,0:20:60.20:0,60,838
chr10	84403232	.	A	ACGC	1810.43	PASS	AC=16;AF=0.348;AN=46;BaseQRankSum=-5.117;DP=302;FS=0.752;HRun=0;HaplotypeScore=43.0617;InbreedingCoeff=0.6975;MQ=74.38;MQ0=0;MQRankSum=-1.600;QD=24.80;ReadPosRankSum=-1.084;VQSLOD=3.0730;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,6:10:12.51:243,13,0	./.	0/0:9,0:9:6.02:0,6,85	./.	./.	0/0:3,0:3:6.02:0,6,83	0/0:26,0:26:45.10:0,45,580	./.	0/0:19,0:19:42.13:0,42,575	1/1:2,1:3:6.02:115,6,0	1/1:3,0:3:1.25:3,1,0	0/0:14,0:14:17.73:0,18,236	0/0:13,0:13:24.08:0,24,338	0/0:15,0:15:24.03:0,24,299	1/1:9,0:13:5.81:51,6,0	1/1:3,2:7:6.02:121,6,0	1/1:5,25:31:69.24:1386,69,0	0/0:36,0:36:87.29:0,87,1224	0/0:12,0:12:6:0,6,60	1/1:2,0:2:0.47:1,0,0	0/0:24,0:24:27.07:0,27,362	0/0:5,0:5:3.01:0,3,42	0/0:2,0:2:3.01:0,3,42	0/0:20,0:20:42.14:0,42,591	0/0:6,0:6:12.04:0,12,169	./.	0/0:7,0:7:12.04:0,12,169	1/1:3,0:4:3.90:41,4,0
chr10	84404203	.	T	TCAA	12037.81	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-13.183;DP=674;FS=8.106;HRun=0;HaplotypeScore=89.4935;InbreedingCoeff=0.9809;MQ=88.85;MQ0=0;MQRankSum=-5.646;QD=57.32;ReadPosRankSum=3.280;VQSLOD=6.7664;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,38:40:99:2390,105,0	1/1:2,10:12:33.11:756,33,0	0/0:28,0:28:75.26:0,75,1243	0/0:23,0:23:63.13:0,63,963	0/0:20,0:20:57.16:0,57,903	0/0:20,0:20:57.17:0,57,944	0/0:20,0:20:60.21:0,60,1023	0/0:24,0:24:63.22:0,63,1067	0/0:20,0:20:57.20:0,57,972	1/1:4,28:32:87.30:1979,87,0	1/1:1,6:7:15.05:346,15,0	0/0:33,0:33:93.30:0,93,1560	0/0:18,0:18:51.17:0,51,870	0/0:40,0:40:99:0,111,1866	1/1:5,24:31:78.18:1698,78,0	1/1:2,18:21:51.18:1175,51,0	1/1:3,31:35:84.11:1929,84,0	0/0:17,0:17:48.15:0,48,792	0/0:34,0:34:99:0,99,1686	0/0:15,0:15:42.13:0,42,690	0/0:50,0:50:99:0,141,2366	0/0:16,0:16:36.12:0,36,596	0/0:18,0:18:54.18:0,54,907	0/0:26,0:26:78.27:0,78,1317	0/0:12,0:12:36.12:0,36,614	1/1:3,21:27:78.23:1627,78,0	0/0:30,0:30:90.29:0,90,1506	1/1:0,3:4:6.02:138,6,0
chr10	84404498	.	GACAC	G	144.50	PASS	AC=2;AF=0.042;AN=48;BaseQRankSum=2.320;DP=529;FS=16.714;HRun=0;HaplotypeScore=96.9994;InbreedingCoeff=0.4452;MQ=68.30;MQ0=5;MQRankSum=0.797;QD=5.78;ReadPosRankSum=-1.003;VQSLOD=1.0375;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,16:25:15.05:231,15,0	0/0:6,0:7:3.01:0,3,59	./.	./.	0/0:15,0:15:18.06:0,18,378	0/0:15,0:14:23.82:0,24,452	0/0:32,0:32:1.61:0,2,61	0/0:22,0:21:7.23:0,7,78	./.	0/0:16,0:15:18.06:0,18,364	./.	0/0:28,0:30:42.10:0,42,863	0/0:18,0:22:29.57:0,30,511	0/0:15,0:18:12.04:0,12,177	0/0:22,0:27:7.99:0,8,118	0/0:19,0:19:12.04:0,12,203	0/0:23,0:24:15.05:0,15,276	0/0:18,0:20:26.53:0,27,428	0/0:15,0:15:15.05:0,15,304	0/0:6,0:6:2.96:0,3,59	0/0:24,0:24:14.98:0,15,258	0/0:16,0:16:11.78:0,12,219	0/0:10,0:11:12.02:0,12,210	0/0:36,0:36:47.88:0,48,917	0/0:12,0:12:21.05:0,21,406	0/0:17,0:17:30.71:0,31,506	0/0:10,0:16:15.01:0,15,279	0/0:4,0:6:6.02:0,6,112
chr10	84405399	.	CTGTG	C	753.36	PASS	AB=0.875;AC=25;AF=0.481;AN=52;BaseQRankSum=4.881;DP=567;FS=9.487;HRun=0;HaplotypeScore=101.6888;InbreedingCoeff=0.5879;MQ=66.19;MQ0=9;MQRankSum=-1.746;QD=2.71;ReadPosRankSum=2.769;VQSLOD=1.1697;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,9:41:5.81:92,6,0	1/1:9,2:11:3.01:46,3,0	./.	./.	0/0:22,0:23:14.91:0,15,228	0/0:20,0:19:17.71:0,18,229	0/1:24,0:27:22.62:23,0,103	0/0:34,0:34:0.94:0,1,2	0/0:9,0:12:6.49:0,6,105	1/1:23,0:23:0.08:35,0,0	1/1:22,0:21:9.01:113,9,0	0/0:9,0:9:2.63:0,3,251	0/0:12,0:12:2.74:0,3,12	0/0:16,0:16:23.80:0,24,423	1/1:14,0:20:9.01:84,9,0	1/1:11,4:15:9.03:138,9,0	1/1:24,9:33:13.27:151,13,0	0/0:27,0:28:29.20:0,29,373	1/1:16,0:16:0.89:2,1,0	1/1:11,0:16:9.01:84,9,0	1/1:14,1:15:3.48:47,3,0	0/0:11,0:11:12.03:0,12,200	0/0:18,0:18:15.05:0,15,301	0/0:29,0:28:33.11:0,33,694	1/1:18,0:19:2.53:27,3,0	0/0:20,0:20:17.98:0,18,258	1/1:12,0:17:9.01:84,9,0	0/0:15,0:14:2.74:0,3,12
chr10	84408753	.	T	TA	1002.31	PASS	AB=0.742;AC=13;AF=0.232;AN=56;BaseQRankSum=-0.590;DP=428;FS=26.668;HRun=12;HaplotypeScore=62.4928;InbreedingCoeff=0.3678;MQ=72.10;MQ0=15;MQRankSum=-0.210;QD=6.87;ReadPosRankSum=-0.488;VQSLOD=0.1833;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:20:17.53:102,18,0	0/1:6,3:9:11.15:39,0,11	0/0:20,0:9:5.91:0,6,41	0/0:15,0:14:7.92:0,8,76	0/0:17,1:19:27.76:0,28,213	0/0:22,0:23:40.04:0,40,288	0/0:11,0:12:16.88:0,17,113	0/0:14,0:16:6.46:0,6,130	0/0:12,0:11:13.93:0,14,93	0/1:10,7:14:20.19:132,0,20	0/1:7,13:21:0.04:191,0,0	0/0:14,1:15:28.77:0,29,198	0/0:4,0:5:10.98:0,11,72	0/0:11,0:11:20.83:0,21,151	0/0:9,0:9:11.91:0,12,87	0/1:4,8:12:2.16:128,0,2	1/1:3,19:24:21.07:374,21,0	0/0:39,0:39:90.36:0,90,634	0/0:8,0:8:14.78:0,15,105	0/0:11,0:16:25.92:0,26,155	0/0:17,0:17:41.06:0,41,278	0/0:14,0:14:25.38:0,25,178	0/1:10,1:10:9.72:10,0,35	0/0:11,0:11:14.78:0,15,102	0/1:5,7:12:3.88:128,0,4	0/1:15,0:14:11.03:46,0,11	0/0:10,0:9:9.05:0,9,61	1/1:3,0:2:2.74:12,3,0
chr10	84408851	.	AC	A	4807.05	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.762;DP=384;FS=8.276;HRun=3;HaplotypeScore=65.8299;InbreedingCoeff=0.5834;MQ=35.08;MQ0=31;MQRankSum=-2.336;QD=14.22;ReadPosRankSum=2.804;VQSLOD=3.5703;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:18:46.99:284,47,0	1/1:3,0:4:8.81:57,9,0	0/0:16,0:2:2.68:0,3,11	0/0:27,1:6:2.81:0,3,26	1/1:9,2:11:26.68:193,27,0	1/1:12,1:14:38.78:247,39,0	1/1:5,3:6:13.74:119,14,0	1/1:17,0:17:41.31:281,41,0	1/1:10,1:9:26.33:176,26,0	1/1:14,2:16:32.03:256,32,0	1/1:5,0:5:6.93:33,7,0	1/1:5,0:4:8.89:59,9,0	1/1:1,5:7:5.88:49,6,0	1/1:12,2:15:40.10:216,40,0	1/1:7,2:10:25.82:160,26,0	1/1:8,2:12:34.82:235,35,0	1/1:16,3:20:56.23:401,56,0	1/1:8,3:12:15.37:226,15,0	1/1:18,1:17:37.28:274,37,0	1/1:8,1:10:21.86:128,22,0	1/1:1,4:6:8.96:87,9,0	1/1:7,1:7:19.62:127,20,0	1/1:13,1:13:20.88:127,21,0	1/1:7,2:11:9.68:155,10,0	1/1:12,2:17:43.19:265,43,0	1/1:15,2:16:41.66:305,42,0	1/1:11,1:14:29.10:175,29,0	1/1:15,0:12:23.51:172,24,0
chr10	84408853	.	CCAAAA	C	2679.62	PASS	AB=0.950;AC=32;AF=0.571;AN=56;BaseQRankSum=-7.093;DP=376;FS=5.358;HRun=0;HaplotypeScore=90.4092;InbreedingCoeff=-0.1379;MQ=35.43;MQ0=27;MQRankSum=-4.421;QD=8.87;ReadPosRankSum=-0.824;VQSLOD=1.5327;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:18:46.99:284,47,0	1/1:3,1:4:8.94:97,9,0	0/0:21,0:2:3.01:0,3,52	0/0:32,0:6:5.67:0,6,71	0/1:10,0:11:39.86:40,0,70	0/1:12,0:15:64.73:65,0,236	0/0:8,0:6:14.99:0,15,163	0/1:13,0:15:99:131,0,143	0/1:12,0:9:37.83:61,0,38	1/1:4,7:15:15.31:343,15,0	1/1:5,1:6:3.36:20,3,0	1/1:4,0:3:8.89:58,9,0	0/0:7,0:7:5.95:0,6,43	0/1:18,0:16:75.33:75,0,229	0/1:8,0:9:41.68:72,0,42	1/1:9,1:12:9.15:206,9,0	1/1:18,0:20:33.55:337,34,0	0/1:13,0:13:29.97:30,0,166	0/1:17,1:16:99:150,0,204	0/1:9,0:9:18.50:19,0,169	0/0:5,0:5:8.91:0,9,63	0/1:9,0:7:20.10:20,0,96	0/1:9,0:11:59.27:59,0,119	0/1:8,0:10:28.11:28,0,143	0/1:15,0:18:63.45:63,0,289	1/1:11,2:15:14.68:373,15,0	0/1:13,0:12:68.19:68,0,179	1/1:6,6:12:23.47:255,23,0
chr10	84408877	.	AAAG	A	441.80	PASS	AB=0.977;AC=14;AF=0.259;AN=54;BaseQRankSum=6.407;DP=555;FS=14.201;HRun=0;HaplotypeScore=103.1718;InbreedingCoeff=-0.2520;MQ=40.64;MQ0=41;MQRankSum=-4.890;QD=1.64;ReadPosRankSum=4.190;VQSLOD=0.6210;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/1:3,0:3:15.70:18,0,16	0/1:105,0:11:9.50:10,0,151	0/0:109,0:16:16.57:0,17,115	0/1:13,0:13:12.73:13,0,91	0/1:15,1:16:16.70:17,0,229	0/0:15,0:14:3.44:0,3,208	0/0:26,0:26:15.44:0,15,444	0/1:7,0:7:1.62:2,0,79	0/1:23,0:23:99:118,0,111	0/0:18,0:17:22.18:0,22,175	1/1:5,0:4:2.77:7,3,0	0/0:8,0:7:9.21:0,9,47	0/0:14,0:14:0.02:0,0,173	0/1:11,1:11:48.38:48,0,110	0/1:9,1:9:25.82:51,0,26	0/1:19,1:20:94.53:132,0,95	0/0:16,0:14:12.29:0,12,198	0/1:21,0:19:7.70:8,0,335	0/0:10,0:10:18:0,18,191	0/0:7,0:6:10.89:0,11,57	0/0:9,0:9:12.63:0,13,132	0/0:9,0:9:4.54:0,5,132	0/0:8,0:8:16.11:0,16,154	0/0:19,0:19:30.31:0,30,405	0/1:21,0:20:61.96:62,0,109	0/0:18,0:18:3.86:0,4,296	0/1:13,0:11:57.07:96,0,57
chr10	84408878	.	AAG	A	344.11	PASS	AB=0.987;AC=20;AF=0.370;AN=54;BaseQRankSum=6.892;DP=556;FS=18.300;HRun=0;HaplotypeScore=96.6063;InbreedingCoeff=-0.4550;MQ=40.72;MQ0=41;MQRankSum=-3.882;QD=0.97;ReadPosRankSum=6.425;VQSLOD=0.0911;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/1:3,0:3:13.45:13,0,16	0/1:106,0:11:4.52:5,0,124	0/0:110,0:16:15.68:0,16,96	0/1:12,0:12:45.43:45,0,59	0/1:15,1:16:22.96:23,0,151	0/1:15,0:14:3.22:3,0,117	0/0:24,0:24:23.36:0,23,350	0/1:7,0:7:16.28:16,0,51	0/1:21,1:22:61.83:62,0,87	0/0:17,1:17:13.85:0,14,138	1/1:4,0:4:2.92:8,3,0	0/1:8,0:7:5.29:5,0,21	0/0:15,0:15:1.83:0,2,125	0/1:11,1:11:28.49:28,0,81	0/1:11,0:10:22.36:39,0,22	0/1:19,1:20:78.39:104,0,78	0/1:16,0:14:18.16:18,0,110	0/1:22,0:20:18.04:18,0,263	0/0:10,0:10:13.80:0,14,119	0/0:7,0:6:0.39:0,0,7	0/0:9,0:9:9.66:0,10,89	0/1:9,0:9:9.09:9,0,93	0/0:8,0:8:9.40:0,9,80	0/1:20,0:19:8.25:8,0,269	0/1:21,0:20:41.64:42,0,98	0/1:18,0:18:10.73:11,0,196	0/1:13,0:11:31.72:32,0,51
chr10	84408890	.	AAG	A	1535.33	PASS	AB=0.976;AC=28;AF=0.519;AN=54;BaseQRankSum=6.501;DP=589;FS=8.464;HRun=0;HaplotypeScore=86.2339;InbreedingCoeff=-0.7848;MQ=44.05;MQ0=44;MQRankSum=-2.149;QD=2.65;ReadPosRankSum=4.231;VQSLOD=0.1313;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:3,1:4:8.83:9,0,41	0/1:111,0:14:5.17:5,0,112	0/1:110,0:16:3.16:3,0,83	0/1:18,0:17:51.39:97,0,51	0/1:18,0:18:80.73:81,0,95	0/1:15,0:15:24.85:25,0,103	0/1:25,0:23:58.64:59,0,225	0/0:7,0:7:0.60:0,1,135	0/1:24,1:24:67.59:68,0,206	0/1:16,2:17:77.68:78,0,113	0/1:6,0:5:5.91:6,0,63	0/1:8,0:8:36.52:37,0,38	0/1:12,0:11:41.45:41,0,80	0/1:13,0:11:36.22:98,0,36	0/1:10,0:10:26.10:96,0,26	0/1:20,1:21:63.51:135,0,64	0/1:17,1:15:75.12:75,0,137	0/1:22,0:19:99:138,0,143	0/1:13,0:13:36.32:36,0,89	1/1:7,0:5:9.05:50,9,0	0/1:8,0:7:31.94:32,0,61	0/1:7,0:7:21.62:22,0,26	1/1:10,0:8:0.97:92,1,0	0/1:16,3:18:99:134,0,101	0/1:22,0:21:94.53:105,0,95	0/1:20,0:20:88.21:88,0,144	0/1:16,0:11:14.90:71,0,15
chr10	84409547	.	C	CT	3727.92	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-7.014;DP=673;FS=3.069;HRun=10;HaplotypeScore=70.5821;InbreedingCoeff=0.9393;MQ=68.94;MQ0=1;MQRankSum=-0.244;QD=22.19;ReadPosRankSum=2.254;VQSLOD=4.7458;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:63.02:404,63,0	1/1:0,3:3:9.02:96,9,0	0/0:15,0:12:1.25:0,1,144	0/0:13,0:14:16.26:0,16,161	0/0:26,0:26:68.90:0,69,566	0/0:23,1:24:33.92:0,34,482	0/0:20,0:20:47.90:0,48,391	0/0:39,0:39:66.94:0,67,620	0/0:21,0:21:56.92:0,57,466	1/1:6,30:36:62.59:871,63,0	1/1:4,35:39:77.53:1007,78,0	0/0:24,0:24:65.92:0,66,542	0/0:18,0:18:41.90:0,42,342	0/0:20,0:20:53.93:0,54,443	0/0:20,0:20:50.91:0,51,416	1/1:7,25:32:44.53:679,45,0	1/1:3,22:25:63.16:672,63,0	0/0:14,0:14:29.95:0,30,246	0/0:24,0:24:16.90:0,17,295	0/0:31,0:31:38.18:0,38,511	0/0:22,0:22:56.93:0,57,468	0/0:21,0:21:44.90:0,45,365	0/0:22,0:22:56.91:0,57,466	0/0:22,0:23:52.96:0,53,425	0/0:29,0:30:71.88:0,72,588	0/0:26,0:28:64.66:0,65,507	0/0:28,0:27:68.91:0,69,567	0/0:21,0:21:49.12:0,49,409
chr10	84409557	.	T	TA	1311.60	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=9.757;DP=659;FS=1.566;HRun=2;HaplotypeScore=73.4295;InbreedingCoeff=0.3569;MQ=65.99;MQ0=1;MQRankSum=1.070;QD=7.21;ReadPosRankSum=5.921;VQSLOD=1.0203;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:34:84.25:1105,84,0	0/1:4,0:4:8.94:9,0,16	0/0:13,0:10:25.86:0,26,278	0/1:12,0:12:9.22:9,0,207	0/0:28,0:28:81.19:0,81,938	0/0:25,0:25:64.39:0,64,811	0/0:17,0:17:48.14:0,48,581	0/0:36,0:36:94.12:0,94,1077	0/0:22,0:22:60.16:0,60,715	0/1:39,0:39:37.94:38,0,195	0/1:39,0:39:48.51:125,0,49	0/0:26,0:26:75.20:0,75,891	0/0:18,0:18:51.09:0,51,565	0/0:18,0:18:54.17:0,54,667	0/0:23,0:23:66.12:0,66,744	0/1:30,0:30:71.39:71,0,77	1/1:24,0:24:20.49:104,20,0	0/0:14,0:14:39.07:0,39,440	0/0:19,0:19:51.11:0,51,582	0/0:28,0:28:67.69:0,68,858	0/0:23,0:23:69.16:0,69,801	0/0:19,0:19:54.11:0,54,615	0/0:21,0:21:60.16:0,60,710	0/0:21,0:21:60.05:0,60,692	0/0:26,0:26:72.21:0,72,872	0/0:29,0:29:80.97:0,81,874	0/0:29,0:28:84.20:0,84,979	0/0:22,0:22:60.07:0,60,667
chr10	84410443	.	GGGA	G	914.22	PASS	AB=0.977;AC=9;AF=0.161;AN=56;BaseQRankSum=8.696;DP=444;FS=66.085;HRun=0;HaplotypeScore=87.6666;InbreedingCoeff=0.2179;MQ=85.16;MQ0=2;MQRankSum=-2.617;QD=7.43;ReadPosRankSum=8.792;VQSLOD=-0.6808;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:51.17:0,51,336	0/1:6,0:6:13.46:46,0,13	0/0:33,0:24:38.96:0,39,457	0/1:26,0:19:34.26:34,0,235	0/0:10,0:10:29.99:0,30,302	0/0:12,0:12:24:0,24,247	0/0:12,0:12:9.19:0,9,150	0/0:8,0:8:11.47:0,11,130	0/0:18,0:18:38.91:0,39,522	0/1:20,0:20:88.24:119,0,88	1/1:11,1:12:1.44:157,1,0	0/0:20,0:20:45.07:0,45,561	0/0:8,0:8:21.05:0,21,303	0/0:12,0:12:30.92:0,31,378	0/0:18,0:18:29.93:0,30,295	1/1:17,3:20:32.96:310,33,0	0/1:26,1:27:31.67:234,0,32	0/0:13,0:13:26.99:0,27,270	0/0:14,1:15:22.18:0,22,250	0/0:15,0:15:6.61:0,7,154	0/0:21,0:21:17.12:0,17,146	0/0:9,0:9:21.50:0,22,288	0/0:11,0:11:17.99:0,18,178	0/0:13,0:13:36.05:0,36,509	0/1:11,1:12:17.08:155,0,17	0/0:13,0:13:16.03:0,16,242	0/0:25,0:25:37.68:0,38,244	0/0:2,0:2:3:0,3,25
chr10	84410790	.	A	ATTAG	4298.14	PASS	AB=0.625;AC=9;AF=0.161;AN=56;BaseQRankSum=-4.704;DP=519;FS=0.535;HRun=0;HaplotypeScore=89.7425;InbreedingCoeff=0.8644;MQ=85.34;MQ0=0;MQRankSum=-4.317;QD=61.40;ReadPosRankSum=2.010;VQSLOD=6.2751;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:81.24:0,81,1405	0/1:2,3:5:42.53:222,0,43	0/0:14,0:14:33.11:0,33,577	0/0:21,0:22:42.01:0,42,694	0/0:20,0:20:54.19:0,54,982	0/0:13,0:13:39.12:0,39,662	0/0:24,0:24:48.16:0,48,870	0/0:29,0:29:69.18:0,69,1157	0/0:21,0:21:60.21:0,60,1091	1/1:5,19:24:57.18:1406,57,0	1/1:1,8:9:21.07:523,21,0	0/0:27,0:27:66.23:0,66,1199	0/0:14,0:14:42.14:0,42,763	0/0:18,0:18:48.16:0,48,871	0/0:17,0:17:45.14:0,45,789	1/1:3,12:15:36.12:919,36,0	1/1:2,15:17:48.16:1228,48,0	0/0:24,0:24:72.25:0,72,1308	0/0:21,0:21:51.17:0,51,907	0/0:15,0:15:36.12:0,36,653	0/0:20,0:20:45.15:0,45,818	0/0:15,0:15:39.13:0,39,709	0/0:15,0:15:42.14:0,42,762	0/0:28,0:28:69.19:0,69,1216	0/0:18,0:18:51.17:0,51,928	0/0:19,0:19:51.13:0,51,893	0/0:13,0:13:39.13:0,39,709	0/0:7,0:7:18.06:0,18,327
chr10	84410839	.	C	CTT	1726.43	PASS	AB=0.795;AC=19;AF=0.339;AN=56;BaseQRankSum=5.865;DP=505;FS=3.002;HRun=13;HaplotypeScore=104.9911;InbreedingCoeff=0.6850;MQ=55.08;MQ0=20;MQRankSum=-7.268;QD=8.68;ReadPosRankSum=-3.640;VQSLOD=1.1778;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:15,1:32:5.01:125,0,5	1/1:1,2:3:6.02:81,6,0	0/0:18,0:11:5.58:0,6,31	0/0:8,0:3:2.92:0,3,22	0/0:13,0:16:25.14:0,25,206	0/0:18,0:17:41.92:0,42,370	0/0:22,0:22:25.86:0,26,189	0/0:20,0:17:20.57:0,21,170	0/0:13,0:14:11.87:0,12,105	1/1:11,3:14:11.41:87,11,0	1/1:8,3:10:17.44:158,17,0	0/0:23,0:25:41.39:0,41,395	0/0:7,0:7:8.82:0,9,68	0/0:22,0:21:22.75:0,23,209	1/1:11,10:22:36.50:312,37,0	1/1:14,1:16:10.17:148,10,0	1/1:11,8:17:28.77:308,29,0	0/0:23,0:25:38.33:0,38,372	0/0:23,0:23:26.92:0,27,250	0/1:18,0:20:6.26:6,0,156	0/0:14,0:14:17.94:0,18,156	0/0:13,0:13:19.20:0,19,182	0/0:14,0:15:3.97:0,4,151	0/0:24,0:22:28.83:0,29,256	1/1:11,0:15:16.43:95,16,0	1/1:18,10:28:27.78:492,28,0	0/0:17,0:15:14.82:0,15,132	0/1:8,3:9:14.40:110,0,14
chr10	84410857	.	C	CT	1733.25	PASS	AB=0.817;AC=19;AF=0.352;AN=54;BaseQRankSum=-0.369;DP=468;FS=0.530;HRun=9;HaplotypeScore=65.2536;InbreedingCoeff=0.7558;MQ=44.15;MQ0=35;MQRankSum=-3.577;QD=10.14;ReadPosRankSum=-3.124;VQSLOD=1.7761;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:47.79:0,48,416	0/1:3,0:3:0:0,0,0	0/0:5,0:1:0:0,0,0	./.	0/0:15,0:16:28.95:0,29,239	0/0:19,1:19:14.82:0,15,357	0/1:15,12:22:6.66:378,0,7	1/1:10,7:13:24.06:258,24,0	0/0:9,0:8:11.97:0,12,104	1/1:15,0:13:20.82:129,21,0	1/1:13,0:10:2.97:20,3,0	0/0:26,0:24:31.18:0,31,368	0/0:7,0:6:12:0,12,104	0/0:19,0:18:35.94:0,36,305	0/0:21,0:19:32.63:0,33,284	1/1:17,0:16:16.92:88,17,0	1/1:16,0:14:10.75:48,11,0	0/0:26,1:24:17.81:0,18,383	0/1:13,6:17:8.01:148,0,8	1/1:8,10:17:39.05:404,39,0	1/1:3,8:10:12.03:133,12,0	0/0:17,0:15:26.96:0,27,231	0/0:14,0:13:17.96:0,18,156	0/0:26,0:24:25.48:0,25,344	0/0:8,0:13:16.62:0,17,49	0/0:22,0:21:38.88:0,39,337	1/1:8,7:13:30.04:318,30,0	0/0:16,0:13:35.91:0,36,296
chr10	84410942	.	CTCTA	C	1745.22	PASS	AB=0.909;AC=21;AF=0.404;AN=52;BaseQRankSum=3.441;DP=494;FS=0.000;HRun=0;HaplotypeScore=87.4061;InbreedingCoeff=0.7814;MQ=54.51;MQ0=25;MQRankSum=-0.117;QD=10.45;ReadPosRankSum=1.154;VQSLOD=2.5935;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,6:19:18.06:274,18,0	1/1:5,2:7:9.03:137,9,0	./.	./.	0/0:25,0:25:36.11:0,36,733	0/0:10,0:10:15.05:0,15,330	0/0:20,0:18:8.97:0,9,83	0/0:40,0:31:0:0,0,0	0/0:17,0:16:21.07:0,21,468	0/1:9,1:10:43.48:83,0,43	1/1:8,4:12:15.05:228,15,0	0/0:15,0:14:15.05:0,15,329	0/0:14,0:13:24.08:0,24,494	0/0:12,0:12:9.01:0,9,162	0/0:18,0:17:9.03:0,9,174	1/1:11,2:13:15.04:207,15,0	1/1:11,2:13:9.03:128,9,0	1/1:8,11:17:15.05:229,15,0	0/0:14,0:11:9.03:0,9,157	0/0:24,0:25:39.08:0,39,594	0/0:18,0:18:21.05:0,21,398	0/0:13,0:11:9.03:0,9,207	1/1:10,6:15:9.03:137,9,0	0/0:27,0:27:33.11:0,33,749	1/1:17,6:23:21.07:320,21,0	1/1:9,0:18:18.02:168,18,0	0/0:14,0:18:33.11:0,33,557	1/1:14,0:12:3:28,3,0
chr10	84411019	.	C	CTT	1806.80	PASS	AB=0.877;AC=11;AF=0.196;AN=56;BaseQRankSum=8.743;DP=523;FS=1.559;HRun=1;HaplotypeScore=111.7545;InbreedingCoeff=0.2411;MQ=54.80;MQ0=8;MQRankSum=-4.265;QD=12.38;ReadPosRankSum=-0.253;VQSLOD=0.2892;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:71.78:0,72,1021	0/1:6,3:9:18.46:220,0,18	0/0:16,0:9:24:0,24,331	0/1:8,0:2:1.43:1,0,37	0/0:28,0:28:64.84:0,65,1088	0/0:25,0:25:62.94:0,63,810	0/0:14,0:14:17.61:0,18,461	0/0:31,0:24:60.14:0,60,855	0/0:14,0:14:33.09:0,33,483	0/1:13,1:13:5.71:268,0,6	1/1:16,4:20:35.86:480,36,0	0/0:22,0:22:66.21:0,66,979	0/0:7,0:7:15.03:0,15,195	0/0:18,0:18:50.94:0,51,747	0/1:20,6:25:99:273,0,583	0/1:11,2:12:32.50:234,0,33	1/1:11,0:11:7.28:214,7,0	0/0:22,0:22:34.97:0,35,851	0/1:18,5:20:99:211,0,474	0/0:27,0:27:63.07:0,63,878	0/0:7,0:7:21.07:0,21,319	0/0:17,0:17:51.17:0,51,780	0/0:23,0:23:69.18:0,69,987	0/0:23,0:23:61.07:0,61,888	0/0:20,0:15:44.83:0,45,422	0/0:20,0:20:60.12:0,60,840	0/1:20,1:21:58.25:58,0,468	0/0:13,0:12:36.08:0,36,524
chr10	84411020	.	TC	T	231.47	PASS	AB=0.895;AC=6;AF=0.107;AN=56;BaseQRankSum=4.745;DP=524;FS=4.277;HRun=1;HaplotypeScore=109.0907;InbreedingCoeff=0.0915;MQ=54.94;MQ0=8;MQRankSum=1.004;QD=3.56;ReadPosRankSum=1.493;VQSLOD=0.5365;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:83.29:0,83,1233	0/1:8,0:8:22.84:35,0,23	0/0:14,0:9:24.06:0,24,322	0/0:9,0:2:4.83:0,5,53	0/0:28,0:28:84.16:0,84,1285	0/0:25,0:25:61.63:0,62,919	0/0:13,2:15:20.10:0,20,474	0/0:32,0:24:66.18:0,66,991	0/0:14,0:14:36.10:0,36,538	0/1:11,3:13:73.91:116,0,74	0/1:16,4:20:42.28:42,0,94	0/0:22,0:22:66.21:0,66,1031	0/0:7,0:7:15.05:0,15,223	0/0:18,0:18:51.17:0,51,800	0/0:26,0:25:44.89:0,45,697	0/1:11,1:11:55.38:55,0,74	1/1:11,0:11:0.68:101,1,0	0/0:22,0:22:63.14:0,63,952	0/0:25,0:22:52.05:0,52,658	0/0:27,0:27:63.21:0,63,994	0/0:7,0:7:21.07:0,21,335	0/0:17,0:17:51.17:0,51,815	0/0:23,0:23:69.22:0,69,1063	0/0:22,0:23:40:0,40,934	0/0:20,0:15:44.86:0,45,621	0/0:21,0:21:63.16:0,63,923	0/0:21,0:21:40.56:0,41,563	0/0:13,0:12:36.08:0,36,547
chr10	84411022	.	TTTC	T	497.85	PASS	AB=0.895;AC=6;AF=0.107;AN=56;BaseQRankSum=5.828;DP=521;FS=6.626;HRun=0;HaplotypeScore=123.5082;InbreedingCoeff=0.1295;MQ=54.95;MQ0=8;MQRankSum=1.140;QD=7.66;ReadPosRankSum=-1.379;VQSLOD=2.0278;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:60.94:0,61,1378	0/1:8,0:8:50.49:56,0,50	0/0:12,0:8:15.04:0,15,286	0/0:9,0:2:0.40:0,0,47	0/0:28,0:28:78.53:0,79,1559	0/0:25,0:25:61.94:0,62,1098	0/0:15,2:17:1.74:0,2,647	0/0:34,0:25:69.19:0,69,1335	0/0:13,0:13:33.11:0,33,757	0/1:11,3:13:32:189,0,32	0/1:16,4:20:83.65:84,0,162	0/0:22,0:22:63.22:0,63,1418	0/0:7,0:7:14.75:0,15,184	0/0:18,0:18:50.91:0,51,1099	0/0:27,0:26:58.54:0,59,1067	0/1:11,1:11:60.03:119,0,60	1/1:11,0:11:5.72:172,6,0	0/0:23,0:23:62.65:0,63,1339	0/0:24,0:21:44.18:0,44,875	0/0:27,0:27:63.20:0,63,1284	0/0:7,0:7:21.07:0,21,432	0/0:17,0:17:51.18:0,51,1161	0/0:22,0:22:66.21:0,66,1462	0/0:23,0:23:42.48:0,42,1364	0/0:19,0:14:30.67:0,31,662	0/0:20,0:20:60.16:0,60,1295	0/0:20,0:20:39:0,39,645	0/0:12,0:11:33.11:0,33,751
chr10	84411023	.	TTC	T	1437.30	PASS	AB=0.922;AC=15;AF=0.268;AN=56;BaseQRankSum=9.962;DP=515;FS=0.000;HRun=0;HaplotypeScore=109.3991;InbreedingCoeff=0.3467;MQ=55.09;MQ0=8;MQRankSum=-3.933;QD=7.15;ReadPosRankSum=-1.286;VQSLOD=3.1152;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:17.15:17,0,832	1/1:5,3:8:16.31:170,16,0	0/0:9,0:6:12.04:0,12,180	0/0:8,0:2:5.64:0,6,27	0/0:29,0:29:9.39:0,9,1008	0/0:25,0:25:34.52:0,35,664	0/1:17,0:17:55.15:55,0,460	0/0:34,0:25:63.18:0,63,870	0/0:13,0:13:33.11:0,33,571	1/1:14,0:13:36.73:366,37,0	1/1:20,0:20:34.35:305,34,0	0/0:21,0:21:63.21:0,63,1054	0/0:7,0:7:5.25:0,5,89	0/0:18,0:18:47.20:0,47,811	0/1:21,6:26:68.97:69,0,620	0/1:9,3:11:25.47:262,0,25	1/1:10,1:11:27.74:263,28,0	0/0:23,0:23:18.08:0,18,957	0/1:21,3:21:95.67:96,0,432	0/0:26,0:26:57.18:0,57,871	0/0:7,0:7:18.06:0,18,279	0/0:17,0:17:51.17:0,51,858	0/0:22,0:22:63.22:0,63,1078	0/0:23,0:23:24.78:0,25,1005	0/1:17,1:13:7.44:7,0,234	0/0:20,0:20:57.19:0,57,944	0/1:19,0:19:4.55:5,0,333	0/0:12,0:11:33.11:0,33,566
chr10	84411025	.	C	CTCTT	4953.72	PASS	AB=0.929;AC=30;AF=0.600;AN=50;BaseQRankSum=4.575;DP=526;FS=0.000;HRun=0;HaplotypeScore=116.1244;InbreedingCoeff=0.7482;MQ=53.94;MQ0=10;MQRankSum=-2.201;QD=14.15;ReadPosRankSum=-1.375;VQSLOD=4.2551;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,12:31:53.48:1100,53,0	1/1:7,0:10:9.47:204,9,0	./.	./.	1/1:16,14:31:45.04:816,45,0	1/1:11,14:25:27.09:632,27,0	1/1:16,0:16:12:202,12,0	1/1:35,0:25:5.98:59,6,0	0/0:13,0:13:24.06:0,24,346	1/1:12,0:15:20.73:182,21,0	1/1:13,0:20:29.01:285,29,0	0/0:23,0:23:30.10:0,30,462	0/0:3,0:7:5.69:0,6,50	0/0:18,0:19:29.88:0,30,419	1/1:20,0:25:24.07:394,24,0	0/1:10,0:11:36:105,0,36	1/1:11,0:11:1.36:3,1,0	0/0:21,0:21:30.10:0,30,455	1/1:22,0:22:26.93:376,27,0	1/1:13,0:26:21.04:295,21,0	./.	0/0:18,0:18:21.06:0,21,302	0/0:21,0:21:39.13:0,39,600	0/1:23,0:23:37.67:38,0,373	1/1:16,0:12:25.31:131,25,0	0/0:20,0:20:33.10:0,33,486	1/1:9,0:22:9.02:131,9,0	0/0:12,0:11:21.07:0,21,323
chr10	84411027	.	C	CTT	776.79	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=10.088;DP=525;FS=7.813;HRun=3;HaplotypeScore=111.3335;InbreedingCoeff=-0.0504;MQ=52.71;MQ0=10;MQRankSum=-3.612;QD=3.28;ReadPosRankSum=4.388;VQSLOD=-0.6240;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:99:106,0,369	0/1:10,0:10:33.30:45,0,33	0/0:6,0:4:9.03:0,9,125	0/0:7,0:2:1.25:0,1,3	0/1:32,0:32:22.30:22,0,642	0/1:24,0:24:64.58:65,0,362	0/0:18,0:18:18.52:0,19,425	0/0:35,0:25:56.80:0,57,749	0/0:13,0:13:33.10:0,33,442	0/1:18,0:15:10.62:11,0,125	0/1:19,0:19:41.24:41,0,141	0/0:23,0:23:63.18:0,63,844	0/0:7,0:7:14.81:0,15,140	0/0:19,0:19:54.06:0,54,714	0/1:26,0:25:56.87:57,0,485	0/1:12,0:11:10.57:11,0,92	0/0:11,0:11:24.04:0,24,158	0/0:23,0:23:57.17:0,57,776	0/1:26,0:21:27.60:28,0,310	0/0:26,0:26:0.74:0,1,510	0/0:6,0:6:18.06:0,18,250	0/0:18,0:18:54.15:0,54,720	0/0:21,0:21:63.20:0,63,861	0/0:23,0:23:64.91:0,65,805	1/1:4,13:12:31.92:540,32,0	0/0:20,0:20:60.19:0,60,824	0/1:23,0:23:1.27:1,0,276	0/0:12,0:11:33.11:0,33,461
chr10	84411090	.	GCCC	G	2561.94	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.411;DP=485;FS=15.106;HRun=7;HaplotypeScore=81.3648;InbreedingCoeff=0.9830;MQ=72.59;MQ0=1;MQRankSum=-5.276;QD=37.13;ReadPosRankSum=1.816;VQSLOD=1.5263;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:30:66.05:0,66,869	1/1:1,4:5:12.04:184,12,0	0/0:26,0:25:75.25:0,75,1581	0/0:21,0:20:57.20:0,57,1228	0/0:21,0:21:57.20:0,57,1183	0/0:16,0:16:33.11:0,33,707	0/0:25,0:25:66.23:0,66,1403	0/0:24,0:25:57.17:0,57,1188	0/0:15,0:15:39.13:0,39,825	1/1:1,11:12:33.11:505,33,0	1/1:1,6:7:18.06:276,18,0	0/0:16,0:17:45.13:0,45,934	0/0:13,0:13:36.12:0,36,749	0/0:13,0:13:36.12:0,36,783	0/0:23,0:22:48.16:0,48,1017	1/1:1,19:20:54.18:828,54,0	1/1:0,7:7:18.06:276,18,0	0/0:21,0:21:63.19:0,63,1334	0/0:19,0:19:54.17:0,54,1068	0/0:17,0:17:42.14:0,42,878	0/0:8,0:8:21.07:0,21,434	0/0:17,0:18:48.14:0,48,983	0/0:12,0:12:27.08:0,27,542	0/0:24,0:24:63.22:0,63,1360	1/1:0,18:18:45.15:679,45,0	0/0:19,0:19:54.19:0,54,1151	0/0:28,0:28:57.11:0,57,1269	0/0:4,0:4:12.04:0,12,242
chr10	84414275	.	G	GA	4673.88	PASS	AB=0.966;AC=21;AF=0.375;AN=56;BaseQRankSum=-1.127;DP=608;FS=1.144;HRun=10;HaplotypeScore=66.6040;InbreedingCoeff=0.9250;MQ=77.92;MQ0=2;MQRankSum=-2.471;QD=19.47;ReadPosRankSum=1.492;VQSLOD=5.8294;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:28:29.15:489,29,0	1/1:1,3:4:9.02:96,9,0	0/1:26,1:23:6.68:7,0,145	0/0:15,0:14:22.66:0,23,164	0/0:27,0:27:62.90:0,63,516	0/0:30,0:30:83.88:0,84,686	0/0:17,1:18:15.95:0,16,337	0/0:31,1:32:45.87:0,46,579	0/0:13,0:13:35.96:0,36,296	1/1:4,29:33:80.32:824,80,0	1/1:7,14:21:39.06:402,39,0	0/0:26,0:26:59.90:0,60,492	0/0:17,0:17:44.92:0,45,366	0/0:23,0:23:62.89:0,63,514	1/1:1,19:20:48.12:511,48,0	1/1:3,17:20:26.50:487,26,0	1/1:5,22:27:51.13:544,51,0	0/0:20,0:20:50.88:0,51,413	0/0:16,0:16:32.91:0,33,270	0/0:31,0:31:77.89:0,78,640	0/0:19,0:19:41.88:0,42,337	0/0:21,0:21:56.90:0,57,465	0/0:24,0:24:56.81:0,57,464	0/0:9,0:9:26.97:0,27,222	1/1:3,14:17:30.08:320,30,0	1/1:7,28:35:75.12:772,75,0	0/0:26,0:26:59.88:0,60,488	1/1:1,6:7:21.05:223,21,0
chr10	84415935	.	TG	T	4927.46	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=0.998;DP=567;FS=1.150;HRun=9;HaplotypeScore=76.5604;InbreedingCoeff=0.9300;MQ=82.69;MQ0=0;MQRankSum=1.208;QD=22.50;ReadPosRankSum=-0.825;VQSLOD=5.2540;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:60.02:546,60,0	0/0:3,0:5:2.84:0,3,14	0/0:23,1:24:8.15:0,8,320	0/0:13,0:13:3.32:0,3,74	0/0:27,0:28:81.05:0,81,894	0/0:11,0:27:28.41:0,28,144	1/1:2,17:19:51.02:467,51,0	1/1:5,22:27:63:567,63,0	1/1:1,19:21:27.45:493,27,0	0/0:8,0:15:23.01:0,23,131	0/0:12,0:21:25.33:0,25,138	0/0:30,0:30:57.41:0,57,887	0/0:24,0:24:63.15:0,63,696	0/0:13,0:13:36.11:0,36,414	1/1:4,24:28:68.06:609,68,0	0/0:7,0:24:25.56:0,26,130	0/0:3,0:17:25.03:0,25,125	0/0:13,0:13:39.05:0,39,434	1/1:5,11:16:32.98:297,33,0	1/1:3,27:30:84.04:768,84,0	1/1:3,31:34:81.04:741,81,0	0/0:21,0:21:54.16:0,54,623	0/0:12,0:12:30.09:0,30,346	0/0:16,0:16:48.12:0,48,535	0/0:10,0:22:37.13:0,37,208	0/0:9,0:15:17.75:0,18,114	1/1:5,17:22:48.01:439,48,0	0/0:2,0:8:12.25:0,12,59
chr10	84416980	.	G	GC	9092.82	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-7.224;DP=365;FS=4.053;HRun=2;HaplotypeScore=44.7310;InbreedingCoeff=0.9081;MQ=68.06;MQ0=0;MQRankSum=0.026;QD=37.57;ReadPosRankSum=0.244;VQSLOD=5.0724;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:57.19:812,57,0	1/1:0,2:2:3.01:43,3,0	0/0:4,0:4:8.96:0,9,92	0/0:7,0:6:15.03:0,15,185	0/0:7,0:7:18.04:0,18,211	1/1:1,11:12:33.07:450,33,0	1/1:1,24:25:66.22:944,66,0	1/1:1,5:6:15.05:216,15,0	0/0:6,0:6:18.06:0,18,223	1/1:1,9:10:27.09:389,27,0	1/1:0,5:5:15.05:216,15,0	0/0:15,0:15:42.13:0,42,520	0/0:6,0:6:15.05:0,15,185	0/0:16,0:16:45.14:0,45,557	1/1:0,5:5:15.05:216,15,0	1/1:0,8:8:18.06:259,18,0	1/1:0,37:37:99:1425,99,0	0/0:28,0:28:75.19:0,75,901	1/1:2,19:21:57.15:797,57,0	1/1:0,3:3:6.02:86,6,0	1/1:1,50:51:99:1900,132,0	0/0:4,0:4:9.02:0,9,102	0/0:4,0:4:12.04:0,12,149	0/0:26,0:26:63.20:0,63,780	1/1:1,8:9:24.08:346,24,0	1/1:0,15:15:45.15:648,45,0	1/1:2,7:9:18.06:259,18,0	1/1:0,2:2:6.02:86,6,0
chr10	84418299	.	GCACACACACACACA	G	3726.99	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.979;DP=666;FS=0.656;HRun=0;HaplotypeScore=237.3536;InbreedingCoeff=0.8595;MQ=66.45;MQ0=10;MQRankSum=-8.737;QD=28.67;ReadPosRankSum=1.184;VQSLOD=2.7281;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:35:20.92:0,21,332	1/1:3,6:9:8.94:347,9,0	0/0:24,0:19:2.50:0,2,9	0/0:11,0:9:3.01:0,3,41	0/0:14,0:15:21.07:0,21,991	1/1:11,0:19:2.08:378,2,0	0/0:14,0:20:14.17:0,14,377	0/0:29,0:29:46.66:0,47,1292	0/0:27,0:28:51.15:0,51,2190	1/1:6,7:13:18.02:590,18,0	1/1:6,12:19:12.04:388,12,0	0/0:31,0:33:60.21:0,60,3152	0/0:27,0:32:60.21:0,60,3183	0/0:36,0:39:64.10:0,64,3222	0/0:25,0:35:46.09:0,46,1930	1/1:10,14:26:37.06:1274,37,0	1/1:20,9:28:12.93:358,13,0	0/0:23,0:28:57.20:0,57,2916	0/0:15,0:15:12.04:0,12,352	0/0:9,0:14:18.06:0,18,793	0/0:31,0:45:33.11:0,33,1360	0/0:18,0:19:33.11:0,33,1669	0/0:20,0:20:37.01:0,37,1536	0/0:39,0:44:81.28:0,81,4209	1/1:6,0:14:12.04:391,12,0	0/0:16,0:19:39.13:0,39,940	0/0:13,0:14:18.06:0,18,513	0/0:7,0:11:21.07:0,21,634
chr10	84418479	.	TCAAC	T	1833.63	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.615;DP=808;FS=0.000;HRun=0;HaplotypeScore=127.8376;InbreedingCoeff=0.9917;MQ=81.25;MQ0=0;MQRankSum=-0.953;QD=50.93;ReadPosRankSum=0.178;VQSLOD=4.5592;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,154,4133	0/0:13,0:13:39.13:0,39,1070	0/0:20,0:20:60.21:0,60,1539	0/0:23,0:23:59.39:0,59,1669	0/0:34,0:34:99:0,102,2701	0/0:23,0:23:63.22:0,63,1715	0/0:30,0:30:90.31:0,90,2429	0/0:35,0:35:99:0,99,2574	0/0:42,0:42:99:0,126,3414	0/0:31,0:31:87.29:0,87,2321	0/0:18,0:18:54.19:0,54,1478	0/0:40,0:40:99:0,120,3156	0/0:31,0:31:87.29:0,87,2261	0/0:33,0:33:93.30:0,93,2444	0/0:41,0:41:99:0,120,3284	0/0:47,0:47:99:0,141,3733	0/0:13,0:13:39.11:0,39,964	0/0:22,0:22:66.17:0,66,1689	0/0:21,0:21:60.20:0,60,1526	0/0:28,0:28:84.27:0,84,2214	0/0:40,0:40:99:0,108,2811	0/0:28,0:28:81.28:0,81,2210	0/0:18,0:18:51.17:0,51,1302	0/0:36,0:36:99:0,105,2753	0/0:23,0:23:69.21:0,69,1638	1/1:1,29:31:90.23:1661,90,0	0/0:30,0:29:90.28:0,90,2259	1/1:0,5:5:15.05:291,15,0
chr10	84418845	.	C	CG	1018.89	PASS	AB=0.764;AC=6;AF=0.107;AN=56;BaseQRankSum=8.321;DP=772;FS=4.008;HRun=2;HaplotypeScore=87.0464;InbreedingCoeff=-0.1200;MQ=77.26;MQ0=0;MQRankSum=-7.576;QD=5.20;ReadPosRankSum=-0.707;VQSLOD=0.4053;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:35,9:44:99:147,0,1057	0/0:14,0:14:42.14:0,42,585	0/0:15,0:15:42.14:0,42,586	0/0:21,0:21:60.20:0,60,830	0/0:22,0:22:60.13:0,60,762	0/1:26,16:42:99:142,0,864	0/0:36,0:36:99:0,102,1406	0/0:45,0:45:99:0,126,1717	0/0:22,0:22:66.21:0,66,903	0/0:21,0:21:60.20:0,60,836	0/0:15,0:15:45.10:0,45,586	0/0:35,0:35:99:0,105,1466	0/0:33,0:33:99:0,99,1378	0/0:22,0:22:66.22:0,66,922	0/1:23,12:35:99:333,0,771	0/0:39,0:39:99:0,114,1544	0/0:31,0:31:87.25:0,87,1195	0/0:28,0:28:83.31:0,83,1139	0/0:23,0:23:63.19:0,63,848	0/0:27,0:27:78.21:0,78,1045	0/0:43,0:43:99:0,126,1752	0/0:16,0:16:48.15:0,48,650	0/0:16,0:16:42.14:0,42,581	0/0:34,0:34:99:0,102,1424	0/1:13,10:23:97.22:97,0,400	0/1:25,12:37:99:327,0,827	0/0:18,0:18:54.18:0,54,752	0/1:12,3:15:97.54:98,0,457
chr10	84419461	.	T	TG	140.85	PASS	AB=0.630;AC=2;AF=0.036;AN=56;BaseQRankSum=0.340;DP=593;FS=0.951;HRun=0;HaplotypeScore=92.2588;InbreedingCoeff=0.3667;MQ=69.92;MQ0=10;MQRankSum=1.429;QD=3.06;ReadPosRankSum=3.408;VQSLOD=2.9958;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.33:0,54,467	0/0:6,0:6:15:0,15,130	0/0:54,0:17:28.56:0,29,302	0/0:31,0:15:23.18:0,23,158	0/0:30,0:30:73.88:0,74,703	0/1:9,13:20:17.51:96,0,18	0/0:16,0:16:41.56:0,42,319	0/0:34,0:34:87.95:0,88,752	0/0:16,0:15:42.03:0,42,347	0/0:35,0:35:99:0,99,822	0/0:17,0:16:42.97:0,43,320	0/0:14,0:14:42.04:0,42,433	0/0:16,0:16:47.32:0,47,402	0/0:12,0:12:32:0,32,287	0/0:20,0:20:56.97:0,57,505	0/0:34,0:34:95.86:0,96,818	0/0:19,0:19:38.49:0,38,289	0/0:14,0:13:29.99:0,30,284	0/0:18,0:15:44.89:0,45,394	0/0:18,0:18:52.56:0,53,487	0/0:9,0:9:18.49:0,18,174	0/0:21,0:21:54.98:0,55,489	0/0:18,0:17:39.94:0,40,396	0/0:15,0:14:39.05:0,39,418	0/1:10,13:24:0.19:133,0,0	0/0:28,0:28:72.01:0,72,667	0/0:17,0:17:40.58:0,41,319	0/0:16,0:16:42.04:0,42,389
chr10	84419903	.	G	GTC	759.86	PASS	AB=0.773;AC=4;AF=0.071;AN=56;BaseQRankSum=-1.956;DP=630;FS=1.687;HRun=0;HaplotypeScore=101.8718;InbreedingCoeff=0.6764;MQ=67.71;MQ0=7;MQRankSum=-0.036;QD=10.13;ReadPosRankSum=-1.203;VQSLOD=3.2477;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:20:1.06:1,0,110	0/0:15,0:15:35.86:0,36,286	0/0:22,0:13:29.22:0,29,339	0/0:27,0:22:34.10:0,34,341	0/0:29,0:28:67.74:0,68,691	1/1:3,26:29:14.70:363,15,0	0/0:20,0:20:54.02:0,54,558	0/0:21,0:21:56.97:0,57,555	0/0:22,0:22:41.43:0,41,681	0/0:24,0:24:57.71:0,58,459	0/0:28,0:28:71.74:0,72,569	0/0:25,0:25:72.08:0,72,824	0/0:17,0:16:41.95:0,42,421	0/0:19,0:19:42.06:0,42,476	0/0:21,0:20:51.09:0,51,599	0/0:23,0:23:56.85:0,57,461	0/0:20,0:20:26.90:0,27,209	0/0:15,0:15:36.07:0,36,446	0/0:13,0:12:33.02:0,33,334	0/0:21,0:21:63.06:0,63,707	0/0:30,0:29:66.09:0,66,768	0/0:28,0:28:45.36:0,45,692	0/0:22,0:22:60:0,60,632	0/0:16,0:15:45.03:0,45,510	0/1:4,20:24:1.55:498,0,2	0/0:34,0:34:86.66:0,87,698	0/0:29,0:29:77.65:0,78,792	0/0:14,0:14:35.93:0,36,292
chr10	84419907	.	CTGTGTG	C	4687.47	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.883;DP=651;FS=1.512;HRun=0;HaplotypeScore=133.5100;InbreedingCoeff=0.9754;MQ=64.39;MQ0=9;MQRankSum=-10.130;QD=30.05;ReadPosRankSum=2.787;VQSLOD=4.7973;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:24:8.96:0,9,173	1/1:3,13:16:27.05:519,27,0	0/0:21,0:13:12.04:0,12,296	0/0:23,0:18:17.46:0,17,442	0/0:33,0:32:60.21:0,60,1696	0/0:31,0:30:30.10:0,30,794	0/0:24,0:23:36.10:0,36,947	0/0:22,0:22:30.04:0,30,735	0/0:20,0:22:54.13:0,54,1452	1/1:8,13:23:48.15:906,48,0	1/1:11,16:28:39.09:748,39,0	0/0:26,0:26:60.21:0,60,1841	0/0:13,0:15:27.07:0,27,683	0/0:18,0:18:39.12:0,39,1061	0/0:16,0:19:42.14:0,42,1178	1/1:6,17:23:39.13:790,39,0	1/1:9,10:19:12:207,12,0	0/0:15,0:16:41.24:0,41,1167	0/0:18,0:16:33.10:0,33,742	0/0:24,0:24:54.19:0,54,1607	0/0:33,0:32:72.23:0,72,2027	0/0:23,0:28:42.14:0,42,1283	0/0:19,0:21:48.15:0,48,1303	0/0:19,0:18:36.12:0,36,1117	0/0:25,0:25:39.13:0,39,1088	1/1:14,19:33:25.49:894,25,0	0/0:26,0:29:45.14:0,45,1202	1/1:3,11:14:30.10:624,30,0
chr10	84420070	.	T	TACAC	727.11	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.000;DP=596;FS=0.000;HRun=0;HaplotypeScore=126.2036;InbreedingCoeff=0.9887;MQ=78.75;MQ0=0;MQRankSum=-2.118;QD=40.39;ReadPosRankSum=-1.593;VQSLOD=3.5706;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,11:18:33.10:822,33,0	0/0:8,0:8:18.06:0,18,336	0/0:14,0:14:33.11:0,33,560	0/0:15,0:15:23.20:0,23,418	0/0:22,0:22:63.20:0,63,1138	0/0:30,0:30:75.24:0,75,1356	0/0:20,0:20:54.17:0,54,975	0/0:26,0:26:63.20:0,63,1114	0/0:19,0:19:57.19:0,57,1038	0/0:30,0:30:90.30:0,90,1612	0/0:27,0:27:78.25:0,78,1406	0/0:28,0:28:78.27:0,78,1449	0/0:22,0:22:54.16:0,54,967	0/0:14,0:14:36.12:0,36,669	0/0:34,0:34:90.28:0,90,1606	0/0:24,0:24:69.24:0,69,1286	0/0:23,0:23:57.20:0,57,1063	0/0:17,0:17:43.48:0,43,785	0/0:17,0:17:51.17:0,51,951	0/0:15,0:15:42.13:0,42,746	0/0:15,0:15:39.13:0,39,727	0/0:14,0:14:36.12:0,36,672	0/0:23,0:23:69.24:0,69,1286	0/0:18,0:18:48.15:0,48,852	0/0:30,0:30:78.24:0,78,1385	0/0:22,0:22:63.21:0,63,1146	0/0:31,0:31:87.24:0,87,1585	0/0:19,0:19:42.14:0,42,783
chr10	84420083	.	TAA	T	5077.88	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=12.473;DP=592;FS=1.966;HRun=13;HaplotypeScore=77.2226;InbreedingCoeff=0.9856;MQ=68.92;MQ0=1;MQRankSum=-2.828;QD=22.98;ReadPosRankSum=5.020;VQSLOD=4.8547;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,10:15:26.76:245,27,0	1/1:2,7:9:17.93:175,18,0	0/0:10,0:9:7.54:0,8,146	0/0:12,0:10:17.96:0,18,196	0/0:30,0:30:87.27:0,87,1223	1/1:1,24:25:69.10:668,69,0	0/0:19,0:20:48.16:0,48,680	0/0:23,0:23:51.15:0,51,703	0/0:19,0:21:56.62:0,57,700	1/1:6,23:29:66.05:640,66,0	1/1:2,24:27:65.77:621,66,0	0/0:30,0:30:66.22:0,66,955	0/0:16,0:18:41.62:0,42,555	0/0:13,0:14:35.56:0,36,461	0/0:32,0:33:83.66:0,84,1152	1/1:2,27:29:75.11:727,75,0	1/1:3,17:21:47.78:448,48,0	0/0:17,0:17:45.07:0,45,606	0/0:14,0:15:30.10:0,30,414	0/0:17,0:18:48.13:0,48,643	0/0:15,0:16:33.57:0,34,446	0/0:17,0:18:42.12:0,42,575	0/0:26,0:29:68.71:0,69,931	0/0:15,0:16:35.60:0,36,469	1/1:6,22:29:65.78:623,66,0	1/1:4,20:24:60.07:582,60,0	0/0:30,0:31:81.26:0,81,1137	1/1:1,12:13:36.03:349,36,0
chr10	84422404	.	TAA	T	567.07	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.943;DP=538;FS=0.000;HRun=13;HaplotypeScore=70.5960;InbreedingCoeff=0.7917;MQ=71.49;MQ0=0;MQRankSum=-0.760;QD=18.29;ReadPosRankSum=4.642;VQSLOD=2.9336;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:31:24.03:0,24,841	0/0:3,0:3:9.03:0,9,129	0/0:20,0:18:32.66:0,33,364	0/0:13,0:11:14.50:0,15,128	0/0:20,0:21:50.64:0,51,680	0/0:21,0:22:47.64:0,48,644	0/0:10,2:12:3.70:0,4,348	0/0:29,0:34:64.87:0,65,801	0/0:19,0:20:54.13:0,54,704	0/0:22,0:22:60.18:0,60,815	0/0:22,0:23:52.46:0,52,679	0/0:11,0:14:29.05:0,29,328	0/0:8,0:11:20.56:0,21,267	0/0:19,0:19:51.16:0,51,716	0/0:22,0:22:57.17:0,57,789	0/0:21,0:24:56.16:0,56,753	0/0:19,1:22:30.05:0,30,689	0/0:7,0:7:9.03:0,9,127	0/0:12,0:15:26.06:0,26,320	0/0:21,0:25:50.13:0,50,650	0/0:11,0:11:33.11:0,33,476	0/0:21,0:23:56.11:0,56,684	0/0:21,1:24:27.42:0,27,598	0/0:10,0:10:23.89:0,24,277	0/0:22,0:24:36.79:0,37,775	1/1:4,15:19:4.75:386,5,0	0/0:32,1:34:56.15:0,56,1032	1/1:1,11:12:30.04:291,30,0
chr10	84422600	.	AAC	A	2313.30	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=14.889;DP=555;FS=4.719;HRun=0;HaplotypeScore=82.8818;InbreedingCoeff=0.9184;MQ=66.25;MQ0=1;MQRankSum=0.896;QD=11.23;ReadPosRankSum=1.657;VQSLOD=3.2138;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:24,2:26:40.95:277,41,0	1/1:8,0:8:17.93:71,18,0	0/0:21,0:17:45.02:0,45,575	0/0:13,0:12:36.09:0,36,487	0/0:24,0:24:69.16:0,69,1067	1/1:0,16:16:42.10:613,42,0	0/0:23,0:23:65.36:0,65,1124	0/0:23,0:23:66.19:0,66,1024	0/0:19,0:19:48.12:0,48,723	1/1:29,0:29:61.34:235,61,0	1/1:19,0:19:42.42:148,42,0	0/0:16,0:16:48.15:0,48,764	0/0:20,0:20:57.17:0,57,956	0/0:20,0:20:60.20:0,60,1039	1/1:23,0:23:45.02:158,45,0	1/1:23,0:22:26.18:128,26,0	1/1:24,0:23:49.78:172,50,0	0/0:13,0:13:39.09:0,39,651	0/0:18,0:18:51.11:0,51,793	0/0:19,0:19:57.17:0,57,904	0/0:22,0:22:66.12:0,66,1029	0/0:19,0:19:57.16:0,57,893	0/0:13,0:13:39.13:0,39,682	0/0:28,0:28:84.24:0,84,1345	1/1:0,17:17:45.15:686,45,0	0/1:21,0:21:42.01:42,0,162	0/0:30,0:30:90.30:0,90,1492	0/0:8,0:8:23.34:0,23,144
chr10	84422601	.	AC	A	5956.64	PASS	AB=0.976;AC=20;AF=0.357;AN=56;BaseQRankSum=10.075;DP=552;FS=3.993;HRun=1;HaplotypeScore=59.1447;InbreedingCoeff=0.8680;MQ=67.22;MQ0=1;MQRankSum=-0.421;QD=28.10;ReadPosRankSum=1.397;VQSLOD=4.6692;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,20:26:65.89:856,66,0	1/1:0,8:8:21.02:270,21,0	0/0:19,0:16:45.85:0,46,481	0/0:14,0:13:38.91:0,39,403	0/0:23,0:23:69.14:0,69,859	1/1:16,0:16:41.49:274,41,0	0/0:23,0:23:67.46:0,67,910	0/0:24,0:24:66.13:0,66,831	0/0:16,0:16:48.11:0,48,598	1/1:0,28:28:78.23:1045,78,0	1/1:0,19:19:54.14:732,54,0	0/0:16,0:16:48.14:0,48,634	0/0:19,0:19:57.17:0,57,769	0/0:21,0:21:63.19:0,63,852	1/1:0,23:23:54.18:753,54,0	1/1:1,22:23:47.99:706,48,0	1/1:1,22:22:60.20:836,60,0	0/0:13,0:13:39.09:0,39,518	0/0:17,0:17:51.11:0,51,665	0/0:19,0:19:57.17:0,57,752	0/0:22,0:22:66.05:0,66,836	0/0:20,0:20:60.15:0,60,765	0/0:14,0:14:39.12:0,39,540	0/0:28,0:28:84.17:0,84,1089	1/1:17,0:17:44.47:295,44,0	0/1:19,1:20:6.04:180,0,6	0/0:31,0:31:93.27:0,93,1228	0/1:9,0:9:9.69:10,0,19
chr10	84423352	.	A	ATT	826.04	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.216;DP=501;FS=0.000;HRun=11;HaplotypeScore=69.4379;InbreedingCoeff=0.9205;MQ=69.85;MQ0=0;MQRankSum=0.374;QD=21.18;ReadPosRankSum=0.065;VQSLOD=2.8497;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:27:44.88:0,45,486	0/0:6,0:6:8.97:0,9,87	0/0:16,1:12:20.77:0,21,189	0/0:20,0:12:11.94:0,12,102	0/0:23,0:25:53.45:0,53,484	1/1:4,13:21:35.57:464,36,0	0/0:15,0:15:30:0,30,291	0/0:28,0:29:56.94:0,57,593	0/0:12,0:12:20.98:0,21,204	0/0:21,0:22:32.92:0,33,366	0/0:13,0:14:34.85:0,35,320	0/0:20,0:21:41.73:0,42,390	0/0:16,0:16:36:0,36,349	0/0:14,0:14:26.53:0,27,243	0/0:20,0:19:44.99:0,45,431	0/0:10,0:11:20.97:0,21,253	0/0:29,0:30:68.80:0,69,652	0/0:7,0:7:15:0,15,145	0/0:14,0:15:26.95:0,27,307	0/0:17,0:18:38.96:0,39,416	0/0:6,0:10:11.13:0,11,114	0/0:13,0:13:26.96:0,27,262	0/0:14,0:15:20.87:0,21,246	0/0:16,0:16:32.99:0,33,320	1/1:4,12:18:36.10:484,36,0	0/0:28,0:30:56.59:0,57,628	0/0:18,0:18:45:0,45,436	0/0:21,0:21:60.08:0,60,582
chr10	84423513	.	CTCTG	C	620.37	PASS	AB=0.966;AC=11;AF=0.196;AN=56;BaseQRankSum=2.986;DP=554;FS=3.629;HRun=0;HaplotypeScore=123.0657;InbreedingCoeff=-0.0459;MQ=46.21;MQ0=38;MQRankSum=0.327;QD=3.61;ReadPosRankSum=-6.591;VQSLOD=-0.0230;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:24:38.10:0,38,771	0/1:5,1:7:17.58:18,0,34	0/0:9,0:3:2.98:0,3,22	0/0:15,0:2:3.48:0,3,51	0/0:22,0:20:26.97:0,27,322	0/1:18,2:19:37.76:38,0,74	0/0:28,0:21:29.99:0,30,487	0/0:26,0:24:65.56:0,66,855	0/0:17,0:17:23.39:0,23,644	0/1:24,0:24:99:157,0,110	1/1:9,1:9:8.32:45,8,0	0/0:24,0:24:27.38:0,27,801	0/0:15,0:14:41.63:0,42,700	0/0:18,0:17:39.97:0,40,771	0/1:22,0:20:48.03:48,0,199	0/1:17,1:17:29.18:29,0,133	0/1:25,1:26:13.78:14,0,152	0/0:15,0:12:35.89:0,36,567	0/0:20,0:18:45.43:0,45,578	0/0:18,0:17:26.87:0,27,346	0/0:44,0:41:55.42:0,55,1000	0/0:21,0:20:32.90:0,33,683	0/0:16,0:14:26.42:0,26,472	0/0:32,0:28:48.23:0,48,1018	0/1:15,0:14:56.61:114,0,57	0/1:21,0:17:36.50:225,0,37	0/0:14,0:13:36.05:0,36,735	0/1:8,0:8:8.97:82,0,9
chr10	84423515	.	CTG	C	889.79	PASS	AB=0.966;AC=18;AF=0.321;AN=56;BaseQRankSum=4.603;DP=547;FS=3.352;HRun=0;HaplotypeScore=108.1274;InbreedingCoeff=0.6798;MQ=45.80;MQ0=38;MQRankSum=1.096;QD=5.27;ReadPosRankSum=-4.962;VQSLOD=1.4504;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:24:37.13:0,37,494	1/1:7,0:7:6.15:30,6,0	0/0:7,0:2:2.98:0,3,22	0/0:11,0:2:3.01:0,3,50	0/0:23,0:21:26.97:0,27,275	1/1:18,0:17:4.98:99,5,0	0/0:28,0:21:29.99:0,30,368	0/0:26,0:24:68.36:0,68,674	0/0:16,0:16:6.51:0,7,431	1/1:22,0:22:38.36:185,38,0	1/1:11,0:9:8.31:45,8,0	0/0:24,0:24:9.14:0,9,491	0/0:15,0:14:37.34:0,37,447	0/0:16,0:16:18.92:0,19,492	0/1:21,0:19:53.49:53,0,64	1/1:18,0:17:6.92:34,7,0	0/1:25,2:26:16.68:46,0,17	0/0:18,0:15:13.69:0,14,411	0/0:21,0:18:44.21:0,44,432	0/0:18,0:17:26.87:0,27,274	0/0:46,0:42:54.91:0,55,693	0/0:20,0:19:33.25:0,33,498	0/0:15,1:14:26.41:0,26,327	0/0:31,0:27:47.25:0,47,722	1/1:16,0:15:8.16:129,8,0	1/1:20,1:17:39.37:361,39,0	0/0:13,0:12:35.68:0,36,489	1/1:8,0:8:11.98:97,12,0
chr10	84423536	.	TCACACACA	T	627.77	PASS	AB=0.790;AC=11;AF=0.239;AN=46;BaseQRankSum=4.344;DP=531;FS=0.000;HRun=0;HaplotypeScore=151.6270;InbreedingCoeff=0.3661;MQ=43.30;MQ0=46;MQRankSum=-4.290;QD=4.98;ReadPosRankSum=-0.523;VQSLOD=2.5015;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:5,0:7:1.53:0,2,6	./.	./.	0/0:11,0:15:3.01:0,3,68	0/0:16,0:15:0.47:0,0,1	0/0:24,8:25:1.23:0,1,3	0/0:19,0:17:0:0,0,0	0/0:20,0:20:12.04:0,12,390	1/1:12,0:16:5.99:118,6,0	0/0:10,0:7:0.47:0,0,1	0/0:32,0:32:32.85:0,33,1049	0/0:13,0:12:6.02:0,6,174	0/0:19,0:17:15.05:0,15,343	./.	0/1:18,0:17:13.97:51,0,14	1/1:21,0:28:1.50:6,2,0	0/0:23,0:19:30.10:0,30,892	1/1:18,1:15:6.02:148,6,0	0/0:11,0:11:2.99:0,3,24	0/0:48,0:43:0.94:0,1,2	0/0:19,0:17:18.06:0,18,498	0/0:14,0:13:9.01:0,9,246	0/0:37,0:33:42.12:0,42,1167	./.	0/1:13,0:14:3.56:160,0,4	0/1:11,7:16:7.98:209,0,8	1/1:2,0:4:3.01:56,3,0
chr10	84424138	.	C	CA	1523.52	PASS	AB=0.728;AC=8;AF=0.143;AN=56;BaseQRankSum=-7.294;DP=603;FS=1.594;HRun=12;HaplotypeScore=69.1745;InbreedingCoeff=0.6450;MQ=70.38;MQ0=1;MQRankSum=0.358;QD=13.48;ReadPosRankSum=0.782;VQSLOD=4.0438;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:41.72:0,42,306	0/0:15,1:16:6.57:0,7,210	0/0:17,0:16:23.28:0,23,158	0/0:12,0:10:2.78:0,3,22	0/0:28,0:28:56.62:0,57,416	1/1:8,14:22:17.15:328,17,0	0/1:17,3:21:29.12:29,0,259	0/0:35,0:35:59.47:0,59,433	0/0:22,0:23:58.68:0,59,422	0/0:25,1:28:37.43:0,37,419	0/0:24,0:24:59.59:0,60,437	0/0:16,0:16:34.82:0,35,247	0/0:28,1:29:21.36:0,21,321	0/0:16,0:16:35.73:0,36,262	0/0:23,0:23:53.64:0,54,394	0/0:18,0:19:49.73:0,50,356	0/0:23,1:24:24.50:0,24,343	0/0:19,1:20:3.52:0,4,190	0/0:24,0:24:56.59:0,57,414	0/0:31,0:32:73.59:0,74,531	0/0:10,0:10:17.86:0,18,131	0/0:20,0:21:32.75:0,33,317	0/0:13,0:13:13.93:0,14,238	0/0:11,0:11:32.81:0,33,241	1/1:6,16:22:47.91:452,48,0	0/1:8,21:29:5.60:420,0,6	0/0:30,0:30:67.49:0,67,482	1/1:2,17:19:29.18:445,29,0
chr10	84424387	.	C	CAGCTACATAGCA	25728.22	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-4.895;DP=547;FS=20.101;HRun=0;HaplotypeScore=165.3543;InbreedingCoeff=0.9906;MQ=62.57;MQ0=0;MQRankSum=-16.753;QD=124.29;ReadPosRankSum=0.056;VQSLOD=3.8689;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,11:27:60.16:3248,60,0	1/1:5,7:13:30.10:1691,30,0	0/0:15,0:15:39.13:0,39,1155	0/0:22,0:21:36.38:0,36,1470	0/0:21,0:21:57.19:0,57,1855	1/1:8,8:17:39.13:2173,39,0	0/0:15,0:15:45.15:0,45,1646	0/0:39,0:39:99:0,105,3654	0/0:18,0:18:48.16:0,48,1791	1/1:6,5:11:27.09:1508,27,0	1/1:9,11:22:60.12:2715,60,0	0/0:19,0:19:57.20:0,57,2089	0/0:14,0:14:39.11:0,39,1283	0/0:14,0:14:33.11:0,33,1169	1/1:10,8:19:39.13:2272,39,0	1/1:7,12:22:51.18:2996,51,0	1/1:14,8:22:57.15:2627,57,0	0/0:17,0:16:51.17:0,51,1795	0/0:21,0:21:57.20:0,57,1921	0/0:29,0:29:75.26:0,75,2771	0/0:26,0:26:72.25:0,72,2673	0/0:9,0:9:21.06:0,21,697	0/0:9,0:9:27.09:0,27,920	0/0:26,0:26:72.25:0,72,2601	1/1:6,13:20:48.16:2796,48,0	1/1:15,10:25:60.19:3150,60,0	0/0:26,0:26:78.25:0,78,2745	1/1:0,4:7:9.03:550,9,0
chr10	84424506	.	T	TAA	6051.27	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-9.202;DP=505;FS=2.825;HRun=11;HaplotypeScore=72.7754;InbreedingCoeff=0.9578;MQ=88.19;MQ0=1;MQRankSum=-3.948;QD=28.82;ReadPosRankSum=2.673;VQSLOD=5.5002;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:10:14.97:51,15,0	1/1:3,6:11:23.56:298,24,0	0/0:30,0:29:20.88:0,21,227	0/0:21,0:19:21:0,21,173	0/0:31,0:31:81.06:0,81,773	1/1:4,16:21:44.64:617,45,0	0/0:12,0:12:30.01:0,30,291	0/0:35,0:37:65.34:0,65,655	0/0:18,0:18:35.98:0,36,344	1/1:4,14:19:48.12:650,48,0	1/1:0,22:23:66.18:916,66,0	0/0:18,0:18:32.98:0,33,314	0/0:14,0:14:33.03:0,33,320	0/0:11,0:12:17.85:0,18,211	1/1:6,10:18:26.69:331,27,0	1/1:0,11:11:30.10:434,30,0	1/1:3,19:24:50.11:668,50,0	0/0:17,0:17:29.98:0,30,291	0/0:16,0:17:32.74:0,33,303	0/0:13,0:14:41.81:0,42,390	0/0:5,0:5:15.02:0,15,145	0/0:9,0:9:21.02:0,21,198	0/0:8,0:8:1.33:0,1,155	0/0:7,0:7:15:0,15,139	1/1:4,18:22:48.12:666,48,0	1/1:5,18:24:56.65:768,57,0	0/0:22,0:22:51.01:0,51,488	1/1:4,22:26:45.15:652,45,0
chr10	84424686	.	TG	T	627.87	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.499;DP=422;FS=2.930;HRun=5;HaplotypeScore=42.5702;InbreedingCoeff=0.9406;MQ=61.35;MQ0=2;MQRankSum=1.125;QD=23.25;ReadPosRankSum=2.886;VQSLOD=2.5121;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:55.65:0,56,760	0/0:4,0:4:12:0,12,143	0/0:18,0:7:15.05:0,15,199	0/0:11,0:5:12.04:0,12,161	0/0:21,0:21:63.21:0,63,860	1/1:2,16:18:45.13:510,45,0	0/0:11,0:11:30.08:0,30,393	0/0:34,0:34:93.29:0,93,1229	0/0:8,0:8:21.07:0,21,287	0/0:16,0:16:48.15:0,48,642	0/0:15,0:15:36.11:0,36,477	0/0:13,0:13:36.10:0,36,474	0/0:11,0:11:33.11:0,33,450	0/0:8,0:8:24.08:0,24,323	0/0:14,0:14:42.14:0,42,573	0/0:13,0:13:33.11:0,33,451	0/0:27,0:26:72.24:0,72,985	0/0:20,0:20:54.17:0,54,722	0/0:25,0:24:63.20:0,63,859	0/0:17,0:17:48.14:0,48,630	0/0:12,0:12:33.11:0,33,451	0/0:6,0:6:12.04:0,12,164	0/0:14,0:14:42.14:0,42,574	0/0:16,0:16:48.16:0,48,656	1/1:0,9:9:21.06:238,21,0	0/0:11,0:11:33.10:0,33,436	0/0:18,0:18:54.18:0,54,736	0/0:11,0:11:30.10:0,30,410
chr10	84425693	.	TC	T	768.68	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.663;DP=465;FS=18.566;HRun=3;HaplotypeScore=51.8366;InbreedingCoeff=0.9586;MQ=89.04;MQ0=0;MQRankSum=-2.780;QD=29.56;ReadPosRankSum=2.479;VQSLOD=1.8835;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:84.26:0,84,1188	0/0:10,0:10:30.10:0,30,432	0/0:14,0:14:25.98:0,26,460	0/0:20,0:20:57.18:0,57,785	0/0:14,0:14:42.14:0,42,605	1/1:0,17:17:48.15:595,48,0	0/0:20,0:20:57.15:0,57,780	0/0:15,0:15:42.14:0,42,604	0/0:22,0:22:66.20:0,66,915	0/0:11,0:11:30.10:0,30,432	0/0:11,0:11:33.11:0,33,475	0/0:17,0:17:51.16:0,51,717	0/0:17,0:17:51.17:0,51,732	0/0:18,0:18:54.18:0,54,778	0/0:22,0:22:66.20:0,66,931	0/0:14,0:14:39.13:0,39,562	0/0:47,0:47:99:0,132,1883	0/0:24,0:24:69.22:0,69,975	0/0:18,0:18:51.14:0,51,712	0/0:4,0:3:9.03:0,9,130	0/0:20,0:20:57.19:0,57,821	0/0:5,0:5:15.04:0,15,200	0/0:7,0:7:21.07:0,21,302	0/0:11,0:11:33.11:0,33,475	1/1:2,7:9:24.07:295,24,0	0/0:13,0:13:36.12:0,36,519	0/0:21,0:21:63.21:0,63,904	0/0:15,0:15:45.14:0,45,630
chr10	84425758	.	TTA	T	2736.11	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.692;DP=407;FS=25.248;HRun=0;HaplotypeScore=51.1478;InbreedingCoeff=0.9513;MQ=74.20;MQ0=0;MQRankSum=0.934;QD=36.97;ReadPosRankSum=3.078;VQSLOD=2.6488;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:75.21:0,75,1304	1/1:0,7:7:21.07:322,21,0	0/0:12,0:5:14.25:0,14,165	0/0:26,0:15:12.33:0,12,99	0/0:18,0:18:54.19:0,54,992	0/0:15,0:15:45.14:0,45,806	0/0:13,0:13:36.10:0,36,629	0/0:33,0:33:99:0,99,1727	0/0:5,0:5:15.05:0,15,280	1/1:1,19:20:54.12:779,54,0	1/1:0,13:13:39.09:568,39,0	0/0:7,0:7:21.07:0,21,362	0/0:5,0:5:15.04:0,15,248	0/0:8,0:8:21.03:0,21,325	0/0:7,0:7:21.07:0,21,373	1/1:0,5:5:12.04:184,12,0	1/1:0,29:29:69.23:1056,69,0	0/0:25,0:25:75.26:0,75,1353	0/0:33,0:33:99:0,99,1770	0/0:9,0:9:27.09:0,27,484	0/0:6,0:6:18.03:0,18,269	0/0:5,0:5:15.05:0,15,279	0/0:4,0:4:12.03:0,12,179	0/0:4,0:4:12.04:0,12,224	0/0:16,0:16:48.15:0,48,837	0/0:24,0:24:72.25:0,72,1318	0/0:13,0:13:39.13:0,39,698	0/0:18,0:18:54.19:0,54,1006
chr10	84426128	.	CGTGCGTGTGT	C	1406.83	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=5.544;DP=379;FS=8.830;HRun=0;HaplotypeScore=104.9149;InbreedingCoeff=0.1024;MQ=49.23;MQ0=17;MQRankSum=-4.460;QD=6.37;ReadPosRankSum=-0.378;VQSLOD=1.0713;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:26:45.01:0,45,1009	1/1:2,7:9:14.67:233,15,0	0/1:11,0:4:7.18:7,0,52	0/1:6,0:2:0:0,0,0	0/0:3,0:3:5.99:0,6,50	0/1:14,0:13:33.30:33,0,85	0/1:23,0:22:49.78:50,0,95	0/0:18,0:16:1.92:0,2,157	0/0:12,0:11:23.03:0,23,620	1/1:3,7:9:12.44:191,12,0	1/1:4,5:8:2.59:56,3,0	0/0:11,0:10:27.03:0,27,889	0/0:11,0:11:26.75:0,27,758	0/1:7,0:6:11.92:12,0,341	0/1:11,0:11:6.86:22,0,7	1/1:1,10:11:12.04:261,12,0	1/1:4,16:20:2.62:97,3,0	0/0:19,0:18:41.68:0,42,730	0/1:22,0:17:46.04:149,0,46	0/1:10,0:10:6.13:108,0,6	0/0:19,0:19:5.90:0,6,41	0/0:8,0:8:17.94:0,18,487	0/0:17,0:17:22.16:0,22,1063	0/0:11,0:11:17.89:0,18,796	0/1:17,0:15:51.08:84,0,51	0/1:17,0:17:67.52:68,0,486	0/1:10,0:10:2.48:77,0,2	0/1:14,0:13:99:128,0,300
chr10	84426132	.	CGTGTGTGTGTGTGTGTGTGT	C	1779.79	PASS	AB=0.809;AC=9;AF=0.180;AN=50;BaseQRankSum=4.495;DP=373;FS=1.164;HRun=0;HaplotypeScore=155.8372;InbreedingCoeff=0.5939;MQ=47.74;MQ0=17;MQRankSum=-1.983;QD=17.45;ReadPosRankSum=-1.506;VQSLOD=2.6105;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:26:54.11:0,54,2690	0/0:9,0:9:12.93:0,13,312	./.	./.	./.	0/0:8,0:15:8.77:0,9,200	0/1:12,11:22:99:223,0,105	1/1:9,11:18:29.82:266,30,0	0/0:12,0:11:20.25:0,20,1314	0/0:9,0:8:12.98:0,13,412	0/0:10,0:9:3.48:0,3,109	0/0:11,0:10:24.08:0,24,1700	0/0:11,0:11:21.54:0,22,1380	0/0:8,0:7:8.96:0,9,665	0/0:6,0:10:7.91:0,8,411	0/0:10,0:10:12.04:0,12,384	0/0:18,0:18:7.84:0,8,129	0/0:16,0:15:30.10:0,30,1357	0/1:15,5:15:2.57:627,0,3	1/1:3,7:10:12.04:496,12,0	0/1:18,0:19:0:0,0,0	0/0:9,0:9:19:0,19,1050	0/0:18,0:18:39.13:0,39,2294	0/0:13,0:14:33.11:0,33,2041	0/0:8,0:14:12.04:0,12,341	0/0:12,0:17:38.14:0,38,1441	1/1:1,9:10:6.49:306,6,0	0/0:7,0:11:30.10:0,30,1446
chr10	84426145	.	GT	G	268.80	PASS	AB=0.700;AC=1;AF=0.019;AN=54;BaseQRankSum=3.700;DP=377;FS=1.199;HRun=1;HaplotypeScore=75.2025;InbreedingCoeff=0.0932;MQ=47.02;MQ0=20;MQRankSum=0.337;QD=9.60;ReadPosRankSum=3.051;VQSLOD=1.5184;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,12:23:15.27:342,0,15	0/0:9,0:9:10.03:0,10,56	0/0:7,0:3:9.03:0,9,114	./.	0/0:2,0:2:0.47:0,0,1	0/0:17,0:16:16.59:0,17,180	0/0:19,0:18:6.34:0,6,121	0/0:18,0:16:27.02:0,27,297	0/0:13,0:12:27.09:0,27,382	0/0:9,0:8:11.40:0,11,123	0/0:12,0:11:5.93:0,6,74	0/0:10,0:9:23.70:0,24,307	0/0:10,0:10:24.55:0,25,336	0/0:9,0:8:14.08:0,14,179	0/0:9,0:9:3.90:0,4,40	0/0:12,0:12:16.11:0,16,164	0/0:21,0:21:15.63:0,16,161	0/0:14,0:13:39.13:0,39,544	0/0:16,0:11:17.59:0,18,258	0/0:11,0:11:0.62:0,1,60	0/0:21,0:21:6.02:0,6,76	0/0:11,0:11:20.32:0,20,258	0/0:19,0:19:38.88:0,39,523	0/0:17,0:17:38.14:0,38,523	0/0:16,0:14:14:0,14,188	0/0:17,0:17:45.90:0,46,515	0/0:11,0:10:2.68:0,3,46	0/0:11,0:11:25.14:0,25,241
chr10	84426146	.	T	TG	179.13	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=2.010;DP=379;FS=1.471;HRun=1;HaplotypeScore=76.3640;InbreedingCoeff=0.5886;MQ=47.12;MQ0=20;MQRankSum=3.067;QD=5.97;ReadPosRankSum=0.598;VQSLOD=0.4696;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,6:25:32.89:273,33,0	0/0:9,0:9:11.90:0,12,102	0/0:7,0:3:6.02:0,6,76	./.	0/0:2,0:2:0.47:0,0,1	0/0:17,0:16:17.86:0,18,176	0/0:19,0:18:11.52:0,12,126	0/0:16,0:14:12:0,12,134	0/0:13,0:12:27.09:0,27,347	0/0:9,0:8:12.48:0,12,136	0/0:11,0:10:5.90:0,6,75	0/0:10,0:9:24.07:0,24,297	0/0:10,0:10:24.08:0,24,307	0/0:9,0:8:14.96:0,15,171	0/0:9,0:9:9.31:0,9,77	0/0:12,0:12:17.92:0,18,188	0/0:21,0:21:16.55:0,17,175	0/0:14,0:13:39.13:0,39,499	0/0:15,0:11:31.51:0,32,280	0/0:11,0:11:11.01:0,11,92	0/0:21,0:21:6.02:0,6,76	0/0:11,0:11:19.66:0,20,212	0/0:19,0:19:39.11:0,39,481	0/0:17,0:17:39.02:0,39,466	0/0:18,0:16:17.73:0,18,202	0/0:17,0:17:50.75:0,51,553	0/0:12,0:11:8.50:0,9,72	0/0:11,0:11:32.51:0,33,302
chr10	84427113	.	GGTTT	G	3878.24	PASS	AB=0.636;AC=9;AF=0.161;AN=56;BaseQRankSum=10.869;DP=858;FS=4.553;HRun=0;HaplotypeScore=143.9506;InbreedingCoeff=0.8660;MQ=66.46;MQ0=2;MQRankSum=2.608;QD=30.06;ReadPosRankSum=2.212;VQSLOD=3.7794;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,105,2342	0/1:6,8:14:25.25:359,0,25	0/0:35,0:32:32.85:0,33,762	0/0:28,0:24:42.13:0,42,861	0/0:30,0:30:57.20:0,57,1369	0/0:15,0:35:57.20:0,57,1012	0/0:21,0:21:45.14:0,45,1004	0/0:41,0:41:45.15:0,45,981	0/0:21,0:21:39.13:0,39,940	1/1:11,29:40:84.23:1231,84,0	1/1:7,15:22:42.08:646,42,0	0/0:30,0:30:51.18:0,51,1197	0/0:29,0:29:60.21:0,60,1446	0/0:34,0:34:78.27:0,78,1849	0/0:30,0:30:63.22:0,63,1452	1/1:9,24:32:51.17:821,51,0	1/1:1,19:20:51.17:821,51,0	0/0:22,0:22:39.13:0,39,835	0/0:24,0:24:27.06:0,27,600	0/0:33,1:34:23.91:0,24,1506	0/0:44,0:44:99:0,99,2254	0/0:46,0:46:58.62:0,59,2122	0/0:14,0:14:27.09:0,27,651	0/0:44,0:44:84.29:0,84,1953	0/0:8,0:32:51.17:0,51,896	0/0:36,0:36:24.20:0,24,1562	0/0:35,1:36:23.97:0,24,1455	0/0:18,0:18:42.14:0,42,953
chr10	84431354	.	AGTGTGG	A	6274.68	PASS	AB=1.000;AC=47;AF=0.940;AN=50;BaseQRankSum=3.293;DP=102;FS=8.689;HRun=0;HaplotypeScore=195.0500;InbreedingCoeff=0.1996;MQ=67.72;MQ0=0;MQRankSum=-3.329;QD=63.38;ReadPosRankSum=3.347;VQSLOD=4.5335;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:4:9.03:209,9,0	1/1:0,1:1:3.01:32,3,0	0/0:3,0:3:2.50:0,3,40	0/1:5,0:5:6.11:6,0,109	1/1:0,12:12:33.09:720,33,0	1/1:0,3:3:9.03:200,9,0	1/1:0,1:1:3.01:70,3,0	./.	1/1:0,4:4:12.04:287,12,0	1/1:0,10:10:30.10:679,30,0	1/1:0,5:5:15.05:355,15,0	1/1:0,2:2:6.02:137,6,0	1/1:0,4:4:12.04:282,12,0	1/1:0,4:4:12.04:289,12,0	1/1:0,1:1:2.60:10,3,0	1/1:0,8:8:24.08:504,24,0	1/1:0,1:1:3.01:72,3,0	./.	1/1:0,1:1:3.01:74,3,0	1/1:0,5:5:15.05:357,15,0	./.	1/1:0,3:3:9.03:214,9,0	1/1:0,7:7:21.07:494,21,0	1/1:0,1:1:3.01:71,3,0	1/1:0,5:5:15.05:355,15,0	1/1:0,4:4:12.04:291,12,0	1/1:0,6:6:18.06:424,18,0	1/1:0,2:2:6.02:141,6,0
chr10	84431365	.	AAGG	A	4032.63	PASS	AC=46;AF=0.920;AN=50;BaseQRankSum=3.324;DP=104;FS=14.070;HRun=0;HaplotypeScore=196.7663;InbreedingCoeff=0.4418;MQ=67.09;MQ0=0;MQRankSum=-2.538;QD=42.90;ReadPosRankSum=4.318;VQSLOD=3.6896;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:4:9.03:136,9,0	1/1:0,1:1:2.97:20,3,0	0/0:4,0:3:5.61:0,6,81	0/0:6,0:5:11.85:0,12,202	1/1:0,12:12:24.17:448,24,0	1/1:0,3:3:9.02:121,9,0	1/1:0,1:1:3.01:45,3,0	./.	1/1:0,4:4:12.04:189,12,0	1/1:0,10:10:30.03:416,30,0	1/1:0,5:5:15.05:232,15,0	1/1:0,2:2:6.02:79,6,0	1/1:0,4:4:12.04:169,12,0	1/1:0,4:4:12.04:190,12,0	1/1:0,1:1:2.37:8,2,0	1/1:0,8:8:24.06:341,24,0	1/1:0,1:1:3.01:48,3,0	./.	1/1:0,1:1:3.01:50,3,0	1/1:0,5:5:15.05:235,15,0	./.	1/1:0,3:3:9.03:140,9,0	1/1:0,7:7:21.07:322,21,0	1/1:0,1:1:3.01:46,3,0	1/1:0,5:5:15.05:233,15,0	1/1:0,4:4:12.04:194,12,0	1/1:0,6:6:18.06:278,18,0	1/1:0,2:2:6.02:93,6,0
chr10	84431391	.	AG	A	729.08	PASS	AB=0.857;AC=45;AF=0.900;AN=50;BaseQRankSum=1.646;DP=108;FS=0.000;HRun=1;HaplotypeScore=199.1539;InbreedingCoeff=0.2744;MQ=82.05;MQ0=0;MQRankSum=-1.733;QD=6.94;ReadPosRankSum=2.991;VQSLOD=0.6785;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:9.66:48,10,0	0/0:1,0:1:2.60:0,3,10	1/1:2,3:6:17.83:125,18,0	0/1:4,1:5:17.09:17,0,25	1/1:12,0:12:25.83:98,26,0	1/1:3,0:3:7.04:24,7,0	1/1:1,0:1:2.22:7,2,0	./.	1/1:4,0:4:9.03:30,9,0	1/1:10,0:10:20.94:68,21,0	1/1:5,0:5:11.10:37,11,0	1/1:2,0:2:4.44:14,4,0	1/1:4,0:4:9.50:35,10,0	1/1:4,0:4:9.03:30,9,0	0/0:1,0:1:0:0,0,0	1/1:9,0:9:14.37:46,14,0	1/1:1,0:1:2.22:7,2,0	./.	1/1:1,0:1:2.22:7,2,0	1/1:5,0:5:11.10:36,11,0	./.	1/1:3,0:3:6.66:22,7,0	1/1:7,0:7:15.54:51,16,0	1/1:1,0:1:2.22:7,2,0	1/1:5,0:5:11.10:36,11,0	1/1:4,0:4:8.88:29,9,0	1/1:6,0:6:13.32:43,13,0	1/1:2,0:2:3.11:9,3,0
chr10	84431701	.	G	GCA	11326.16	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-17.133;DP=644;FS=0.644;HRun=0;HaplotypeScore=76.0715;InbreedingCoeff=0.9975;MQ=91.11;MQ0=0;MQRankSum=-1.685;QD=47.39;ReadPosRankSum=4.025;VQSLOD=6.2208;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:66.23:1236,66,0	1/1:0,8:8:18.06:337,18,0	0/0:24,0:24:65.56:0,66,886	0/0:28,0:29:80.19:0,80,1045	0/0:37,0:37:99:0,105,1514	1/1:2,20:22:57.20:1068,57,0	0/0:15,0:15:39.13:0,39,574	0/0:33,0:33:96.31:0,96,1378	0/0:25,0:25:69.22:0,69,997	1/1:1,26:27:78.27:1444,78,0	1/1:1,19:20:42.14:786,42,0	0/0:23,0:23:63.20:0,63,907	0/0:22,0:22:66.20:0,66,945	0/0:23,0:23:66.22:0,66,972	1/1:2,26:28:69.24:1293,69,0	1/1:0,25:25:66.23:1236,66,0	1/1:2,24:26:57.20:1068,57,0	0/0:7,0:7:18.06:0,18,265	0/0:26,0:26:75.24:0,75,1085	0/0:29,0:29:75.25:0,75,1104	0/0:33,0:33:96.31:0,96,1390	0/0:13,0:13:39.11:0,39,554	0/0:23,0:23:63.19:0,63,903	0/0:19,0:19:57.15:0,57,809	1/1:1,16:17:39.13:730,39,0	1/1:1,29:30:87.30:1624,87,0	0/0:24,0:24:69.23:0,69,1013	1/1:0,9:9:27.09:505,27,0
chr10	84432453	.	ATAAT	A	765.68	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.278;DP=465;FS=0.000;HRun=0;HaplotypeScore=74.2151;InbreedingCoeff=0.8817;MQ=67.79;MQ0=0;MQRankSum=-2.514;QD=29.45;ReadPosRankSum=1.104;VQSLOD=3.4801;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:26:48.16:860,48,0	0/0:4,0:4:9.03:0,9,235	0/0:6,0:5:12.04:0,12,273	0/0:13,0:11:23.42:0,23,417	0/0:35,0:35:99:0,99,2483	0/0:19,0:19:57.20:0,57,1443	0/0:13,0:13:30.10:0,30,727	0/0:23,0:23:60.20:0,60,1541	0/0:9,0:9:24.08:0,24,597	0/0:17,0:17:48.16:0,48,1210	0/0:23,0:23:63.20:0,63,1538	0/0:14,0:14:39.13:0,39,1018	0/0:14,0:14:39.12:0,39,919	0/0:14,0:14:42.14:0,42,1062	0/0:10,0:10:30.10:0,30,783	0/0:16,0:16:39.60:0,40,976	0/0:19,0:19:54.66:0,55,1407	0/0:20,0:20:60.21:0,60,1519	0/0:38,0:38:99:0,114,2791	0/0:21,0:21:51.17:0,51,1267	0/0:12,0:12:30.10:0,30,751	0/0:5,0:5:12.04:0,12,313	0/0:7,0:7:21.06:0,21,495	0/0:7,0:7:21.07:0,21,548	0/0:23,0:23:63.19:0,63,1589	0/0:24,0:24:69.24:0,69,1790	0/0:16,0:16:45.15:0,45,1155	0/0:17,0:17:51.18:0,51,1330
chr10	84432964	.	TA	T	764.38	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.385;DP=548;FS=2.698;HRun=10;HaplotypeScore=57.7629;InbreedingCoeff=0.8238;MQ=75.28;MQ0=0;MQRankSum=0.721;QD=17.78;ReadPosRankSum=0.399;VQSLOD=4.2114;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:75.06:0,75,804	0/0:13,0:13:6.52:0,7,238	0/0:18,0:17:7.49:0,7,225	0/0:10,0:10:16.75:0,17,218	0/0:27,2:29:32.12:0,32,811	1/1:4,13:17:35.99:312,36,0	0/0:14,0:14:36.09:0,36,390	0/0:29,1:30:55.11:0,55,810	0/0:16,0:16:36.10:0,36,398	0/0:26,0:26:69.19:0,69,762	0/0:23,0:23:51.14:0,51,564	0/0:8,0:8:21.04:0,21,224	0/0:11,0:11:27.07:0,27,299	0/0:11,1:12:7.03:0,7,306	0/0:18,0:18:13.67:0,14,343	0/0:14,0:14:39.11:0,39,431	0/0:25,0:25:59.06:0,59,750	0/0:22,0:22:48.04:0,48,495	0/0:19,0:21:25.09:0,25,486	0/0:16,1:17:18.85:0,19,411	0/0:8,0:8:18.05:0,18,199	0/0:30,0:30:84.22:0,84,921	0/0:27,1:28:37.09:0,37,620	0/0:11,1:12:7.03:0,7,306	1/1:1,25:26:65.99:573,66,0	0/0:23,0:23:54.13:0,54,589	0/0:24,0:24:51.13:0,51,556	0/0:21,0:21:48.10:0,48,513
chr10	84433794	.	CCA	C	1741.12	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=10.018;DP=501;FS=3.364;HRun=0;HaplotypeScore=94.0689;InbreedingCoeff=0.4465;MQ=74.65;MQ0=1;MQRankSum=-3.114;QD=6.88;ReadPosRankSum=-2.309;VQSLOD=2.8511;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:27.89:28,0,112	1/1:9,0:9:16.97:59,17,0	0/0:19,0:18:34.27:0,34,632	0/0:22,0:20:54.13:0,54,834	0/0:13,0:13:33.11:0,33,560	1/1:12,1:13:17.21:90,17,0	0/1:31,0:31:99:105,0,227	0/1:17,0:17:34.61:68,0,35	0/0:21,0:21:57.01:0,57,905	1/1:14,1:15:31.58:192,32,0	1/1:13,0:13:26.72:152,27,0	0/0:24,0:24:69.10:0,69,1109	0/0:22,0:22:60.13:0,60,947	0/0:15,0:15:45.13:0,45,723	1/1:7,12:19:51.12:615,51,0	1/1:14,0:14:14.07:101,14,0	1/1:33,0:33:71.68:249,72,0	0/0:14,0:14:42.11:0,42,670	0/1:13,0:13:22.14:22,0,109	0/1:12,0:12:14.03:14,0,49	0/0:16,0:16:6.80:0,7,171	0/0:25,0:25:72.21:0,72,1159	0/0:22,0:22:63.05:0,63,999	0/0:18,0:18:51.10:0,51,796	1/1:18,1:19:12.84:158,13,0	0/1:17,0:17:50.83:51,0,68	0/0:17,0:16:4.23:0,4,191	0/1:9,0:9:27.45:39,0,27
chr10	84433795	.	CA	C	5008.56	PASS	AB=0.915;AC=28;AF=0.500;AN=56;BaseQRankSum=4.635;DP=492;FS=0.744;HRun=1;HaplotypeScore=73.7985;InbreedingCoeff=0.5393;MQ=75.93;MQ0=1;MQRankSum=-1.148;QD=17.70;ReadPosRankSum=-4.842;VQSLOD=3.5574;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:20.14:92,0,20	1/1:0,9:9:21.07:291,21,0	0/0:19,0:18:15.21:0,15,474	0/0:23,0:21:57.12:0,57,751	0/0:12,0:12:33.09:0,33,441	1/1:1,12:13:20.94:263,21,0	0/1:27,4:31:17.12:274,0,17	1/1:12,0:12:15.36:172,15,0	0/0:19,0:19:51.21:0,51,710	1/1:7,8:15:41.97:485,42,0	1/1:8,6:14:39.04:427,39,0	0/0:23,0:23:64.09:0,64,877	0/0:22,0:22:60.06:0,60,770	0/0:15,0:15:45.14:0,45,603	1/1:19,0:19:28.91:235,29,0	1/1:3,11:14:33.46:481,33,0	1/1:0,33:33:90.30:1244,90,0	0/0:14,0:14:42.12:0,42,548	0/1:11,2:13:13.51:117,0,14	1/1:11,1:12:1.46:117,1,0	0/1:15,1:16:25.47:103,0,25	0/0:24,0:24:72.16:0,72,912	0/0:21,0:21:58.56:0,59,780	0/0:17,0:17:51.08:0,51,636	1/1:14,5:19:42.63:481,43,0	0/1:15,3:18:4.27:119,0,4	0/1:15,1:16:38.62:39,0,39	1/1:9,0:9:3.62:69,4,0
chr10	84434569	.	G	GTA	1230.63	PASS	AB=0.931;AC=15;AF=0.268;AN=56;BaseQRankSum=-4.043;DP=539;FS=8.381;HRun=0;HaplotypeScore=81.1408;InbreedingCoeff=0.3610;MQ=54.54;MQ0=22;MQRankSum=1.062;QD=6.76;ReadPosRankSum=2.109;VQSLOD=2.4567;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:68.06:0,68,541	1/1:1,2:3:6.02:101,6,0	0/1:23,0:3:8.97:11,0,9	0/0:24,0:5:11.78:0,12,79	0/0:20,0:19:40.52:0,41,369	0/1:23,0:22:4.26:4,0,206	0/0:25,0:25:25.89:0,26,426	0/0:19,0:17:38.60:0,39,298	0/0:19,0:19:23.38:0,23,520	1/1:15,0:15:23.61:285,24,0	1/1:1,5:7:3.01:58,3,0	0/0:19,0:19:53.97:0,54,551	0/0:11,0:11:26.75:0,27,266	0/0:14,0:14:32.92:0,33,318	0/0:16,0:16:32.92:0,33,265	0/1:1,11:13:18.76:206,0,19	1/1:0,41:41:36.12:684,36,0	0/0:21,0:21:53.85:0,54,521	0/1:13,0:11:2.58:3,0,132	0/0:25,0:25:32.35:0,32,462	0/0:35,0:35:89.23:0,89,877	0/0:11,0:10:15.01:0,15,153	0/0:15,0:14:38.67:0,39,375	0/0:35,0:34:93:0,93,1090	0/1:20,0:20:12.14:12,0,207	0/1:15,0:15:22.73:23,0,161	0/0:13,0:13:29.95:0,30,272	0/1:7,0:6:8.66:9,0,36
chr10	84434949	.	ATTGT	A	2067.22	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.791;DP=726;FS=2.919;HRun=0;HaplotypeScore=114.4765;InbreedingCoeff=1.0000;MQ=82.39;MQ0=0;MQRankSum=-1.911;QD=50.42;ReadPosRankSum=2.933;VQSLOD=4.4373;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,2544	0/0:14,0:14:42.14:0,42,1134	0/0:25,0:25:66.01:0,66,1681	0/0:17,0:17:47.83:0,48,1154	0/0:33,0:33:96.31:0,96,2534	0/0:26,0:26:78.25:0,78,2041	0/0:28,0:28:81.28:0,81,2153	0/0:19,0:19:51.18:0,51,1326	0/0:34,0:34:93.32:0,93,2442	0/0:38,0:38:99:0,111,2962	0/0:22,0:22:66.23:0,66,1735	0/0:23,0:23:66.23:0,66,1780	0/0:30,0:30:90.31:0,90,2384	0/0:24,0:24:69.24:0,69,1861	0/0:24,0:24:72.25:0,72,1939	0/0:27,0:27:78.27:0,78,2092	0/0:25,0:25:75.26:0,75,1990	0/0:32,0:32:96.31:0,96,2533	0/0:22,0:22:66.23:0,66,1726	0/0:21,0:21:57.20:0,57,1508	0/0:31,0:31:90.31:0,90,2426	0/0:26,0:26:75.26:0,75,2006	0/0:24,0:24:69.24:0,69,1862	0/0:24,0:24:69.24:0,69,1829	0/0:29,0:28:84.29:0,84,2264	1/1:0,24:24:69.22:1278,69,0	0/0:34,0:33:99:0,99,2607	1/1:1,16:17:48.16:911,48,0
chr10	84435755	.	TGTGGG	T	1367.60	PASS	AB=0.971;AC=12;AF=0.214;AN=56;BaseQRankSum=3.749;DP=414;FS=16.915;HRun=0;HaplotypeScore=87.0989;InbreedingCoeff=0.0591;MQ=58.73;MQ0=19;MQRankSum=-3.464;QD=8.09;ReadPosRankSum=8.036;VQSLOD=-0.3857;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:29:82.85:246,0,83	1/1:5,0:5:15.02:149,15,0	0/0:44,0:20:35.35:0,35,456	0/0:40,0:15:26.78:0,27,275	0/0:8,0:7:9.01:0,9,117	0/0:10,0:9:0.96:0,1,3	0/1:22,0:22:17.26:17,0,424	0/0:16,0:16:1.13:0,1,249	0/0:11,0:11:11.97:0,12,97	0/1:25,0:26:75.75:395,0,76	0/1:22,1:22:80.54:81,0,81	0/0:11,0:11:6.46:0,6,50	0/0:7,0:6:3:0,3,25	0/0:9,0:9:5.47:0,5,68	1/1:1,13:14:18.44:302,18,0	0/1:16,0:15:35.88:136,0,36	0/1:13,0:13:2.67:159,0,3	0/0:8,0:8:8.98:0,9,134	0/1:11,0:11:13.26:13,0,215	0/0:11,0:9:21.30:0,21,170	0/0:17,0:15:35.91:0,36,330	0/0:4,0:4:5.95:0,6,81	0/0:7,0:7:2.99:0,3,24	0/0:8,0:7:2.71:0,3,21	0/1:6,0:7:19.77:20,0,22	0/0:10,0:10:28.17:0,28,264	0/0:15,0:15:2.91:0,3,327	0/0:9,0:8:20.91:0,21,160
chr10	84435757	.	TGGGGG	T	2313.51	PASS	AB=1.000;AC=13;AF=0.250;AN=52;BaseQRankSum=-2.488;DP=404;FS=3.126;HRun=13;HaplotypeScore=82.5363;InbreedingCoeff=0.5814;MQ=60.26;MQ0=21;MQRankSum=-0.791;QD=18.07;ReadPosRankSum=5.849;VQSLOD=0.4877;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,21:29:2.76:530,3,0	1/1:0,5:5:15.05:257,15,0	0/0:46,0:21:23.10:0,23,355	0/0:43,0:16:19.17:0,19,303	0/0:9,0:8:15.05:0,15,285	0/0:9,0:8:5.85:0,6,48	0/0:10,0:22:15.87:0,16,349	0/0:7,0:15:5.56:0,6,116	0/0:11,0:11:6.02:0,6,127	1/1:5,19:25:47.98:749,48,0	1/1:5,16:20:10.37:203,10,0	0/0:6,0:6:3.48:0,3,53	./.	0/0:7,0:7:6.49:0,6,154	0/1:15,0:15:28.72:137,0,29	1/1:3,13:15:14.95:257,15,0	1/1:3,10:13:21.06:347,21,0	0/0:9,0:10:18.06:0,18,396	0/0:6,0:10:5.99:0,6,145	0/0:4,0:7:9.74:0,10,88	0/0:10,0:17:18.05:0,18,213	0/0:2,0:2:6.02:0,6,97	0/0:3,0:3:3.01:0,3,52	0/0:4,0:4:3.01:0,3,53	0/0:6,0:7:5.99:0,6,79	0/0:10,0:10:3.01:0,3,66	0/0:12,0:15:7.54:0,8,206	./.
chr10	84436137	.	T	TTG	1496.19	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.568;DP=643;FS=3.069;HRun=0;HaplotypeScore=75.9762;InbreedingCoeff=0.8544;MQ=66.46;MQ0=1;MQRankSum=0.738;QD=28.23;ReadPosRankSum=1.579;VQSLOD=4.7229;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:49:99:0,119,1347	0/0:4,0:4:9.03:0,9,111	0/0:19,0:16:11.10:0,11,85	0/0:10,0:8:2.35:0,2,46	0/0:19,0:19:54.15:0,54,640	1/1:6,19:24:14.24:733,14,0	0/0:26,0:26:57.17:0,57,691	0/0:27,0:27:59.68:0,60,716	0/0:22,0:23:54:0,54,642	0/0:19,0:19:51.15:0,51,619	0/0:17,0:17:51.16:0,51,627	0/0:27,0:27:69.19:0,69,825	0/0:16,0:16:39.12:0,39,480	0/0:20,0:21:60.01:0,60,705	0/0:26,0:26:60.02:0,60,715	0/0:24,0:24:57.15:0,57,678	0/0:23,0:23:63.16:0,63,759	0/0:15,0:15:17.13:0,17,387	0/0:23,0:23:51.15:0,51,609	0/0:17,0:18:47.94:0,48,551	0/0:37,0:39:98.95:0,99,1149	0/0:18,0:18:48.15:0,48,589	0/0:30,0:30:63.03:0,63,752	0/0:27,0:28:81.05:0,81,958	1/1:3,25:27:54.18:881,54,0	0/0:24,0:24:45.14:0,45,554	0/0:31,0:31:69.02:0,69,802	0/0:12,0:12:36.11:0,36,443
chr10	84436818	.	A	ATG	5614.15	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-11.101;DP=723;FS=0.783;HRun=0;HaplotypeScore=83.1286;InbreedingCoeff=0.9992;MQ=80.50;MQ0=1;MQRankSum=0.293;QD=40.98;ReadPosRankSum=0.460;VQSLOD=6.1610;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1480	1/1:1,10:11:24.08:408,24,0	0/0:18,0:18:38.30:0,38,535	0/0:27,0:27:32.84:0,33,555	0/0:29,0:29:75.21:0,75,945	0/0:25,0:25:72.23:0,72,937	0/0:30,0:30:81.26:0,81,1054	0/0:27,0:27:63.19:0,63,796	0/0:23,0:23:57.18:0,57,738	1/1:3,30:34:99:1641,102,0	1/1:2,32:33:75.26:1270,75,0	0/0:31,0:31:84.26:0,84,1076	0/0:34,0:34:84.26:0,84,1074	0/0:14,0:14:39.13:0,39,507	0/0:39,0:39:99:0,114,1436	1/1:4,26:29:69.24:1173,69,0	1/1:4,23:27:66.23:1122,66,0	0/0:13,0:13:30.08:0,30,375	0/0:27,0:27:63.11:0,63,786	0/0:16,0:16:39.11:0,39,493	0/0:37,0:37:99:0,99,1272	0/0:12,0:12:30.09:0,30,377	0/0:16,0:16:42.12:0,42,531	0/0:27,0:27:78.25:0,78,1013	0/0:24,0:24:57.18:0,57,740	0/0:33,0:33:90.28:0,90,1158	0/0:29,0:29:75.24:0,75,975	0/0:15,0:15:45.12:0,45,556
chr10	84437889	.	C	CTTT	728.30	PASS	AB=0.648;AC=13;AF=0.232;AN=56;BaseQRankSum=9.251;DP=648;FS=2.670;HRun=12;HaplotypeScore=105.0594;InbreedingCoeff=0.3167;MQ=65.10;MQ0=3;MQRankSum=0.046;QD=3.64;ReadPosRankSum=-1.014;VQSLOD=-0.2332;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:39:64.54:0,65,746	1/1:2,0:6:5.45:25,5,0	0/0:21,0:19:26.19:0,26,216	0/0:14,0:9:10.38:0,10,112	0/0:13,0:16:8.59:0,9,262	0/1:6,0:23:12.38:12,0,46	0/0:23,0:25:59.89:0,60,640	0/0:38,0:38:68.73:0,69,759	0/0:27,0:29:34.14:0,34,515	0/1:9,0:28:7.25:19,0,7	0/1:6,0:19:11.04:11,0,19	0/0:34,0:34:53.48:0,53,603	0/1:19,0:20:8.94:9,0,259	0/0:26,0:28:47.52:0,48,499	0/0:23,0:26:52.19:0,52,569	0/1:5,0:26:7.72:41,0,8	0/1:8,0:33:38.50:38,0,44	0/0:13,0:14:32.61:0,33,331	0/0:26,0:26:41:0,41,472	0/0:21,0:24:40.30:0,40,478	0/0:23,0:23:47.90:0,48,538	0/0:15,0:17:28.34:0,28,326	0/0:19,0:19:35.73:0,36,374	0/0:20,0:21:53.94:0,54,575	0/1:7,0:15:0.18:0,0,56	1/1:12,12:25:44.29:617,44,0	0/0:26,0:29:44.51:0,45,516	1/1:0,4:4:6.02:110,6,0
chr10	84440092	.	TAA	T	1132.62	PASS	AB=0.625;AC=14;AF=0.250;AN=56;BaseQRankSum=3.995;DP=472;FS=5.780;HRun=15;HaplotypeScore=65.0025;InbreedingCoeff=0.5926;MQ=74.15;MQ0=0;MQRankSum=0.050;QD=7.87;ReadPosRankSum=5.937;VQSLOD=0.5114;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,12:19:38.33:314,38,0	0/0:1,0:4:10.48:0,10,50	0/0:15,0:15:15.28:0,15,80	0/0:16,0:13:1.25:0,1,92	0/0:17,1:22:26.59:0,27,454	1/1:4,13:18:20.76:229,21,0	0/0:19,1:22:12.62:0,13,398	0/0:18,0:20:44.57:0,45,479	0/0:23,0:25:24.10:0,24,474	0/1:6,1:13:4.82:5,0,58	0/1:4,2:15:26.60:27,0,61	0/0:13,0:15:38.18:0,38,299	0/0:14,0:14:30:0,30,295	0/0:13,0:15:33.03:0,33,357	1/1:1,14:16:34.70:275,35,0	0/0:6,0:11:16.43:0,16,94	0/1:7,1:20:16.03:16,0,56	0/0:22,1:29:45.57:0,46,696	0/0:15,0:15:28.87:0,29,326	0/0:19,0:19:46.74:0,47,431	0/0:10,0:11:17.99:0,18,177	0/0:12,0:12:21.04:0,21,232	0/0:14,0:17:30:0,30,324	0/0:20,0:22:50.54:0,51,536	1/1:7,6:15:13.30:115,13,0	1/1:5,11:18:32.34:266,32,0	0/0:19,0:21:43.96:0,44,383	0/1:5,5:10:11.16:67,0,11
chr10	84440353	.	T	TC	2078.14	PASS	AB=0.705;AC=15;AF=0.268;AN=56;BaseQRankSum=7.449;DP=587;FS=0.436;HRun=9;HaplotypeScore=77.0807;InbreedingCoeff=0.7372;MQ=85.72;MQ0=0;MQRankSum=-1.492;QD=13.58;ReadPosRankSum=0.338;VQSLOD=3.6124;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,1:35:59.80:0,60,740	0/1:4,7:11:11.01:118,0,11	0/0:29,0:29:50.20:0,50,501	0/0:16,0:16:41.02:0,41,342	0/0:21,0:21:50.71:0,51,425	0/0:15,0:15:38.97:0,39,334	0/0:24,1:26:40.81:0,41,563	0/0:23,0:23:57.83:0,58,489	0/0:26,1:27:44.81:0,45,618	0/1:9,13:22:0.51:323,0,1	1/1:2,11:13:4.03:273,4,0	0/0:18,0:18:47.99:0,48,416	0/0:16,0:17:43.99:0,44,365	0/0:11,0:12:32.03:0,32,266	1/1:8,1:20:14.40:75,14,0	1/1:2,12:14:10.04:339,10,0	1/1:6,27:33:49.15:770,49,0	0/1:12,2:14:27.37:27,0,247	0/0:23,0:23:53.94:0,54,458	0/0:16,0:18:46.02:0,46,369	0/0:34,0:34:77.91:0,78,664	0/0:21,0:22:55.99:0,56,468	0/0:18,0:18:50.84:0,51,425	0/0:35,0:35:86.92:0,87,746	0/0:21,0:21:53.72:0,54,454	1/1:7,2:21:32.32:242,32,0	0/0:24,0:23:68.99:0,69,599	1/1:0,1:5:14.51:96,15,0
chr10	84441150	.	AGTGTGTGTGT	A	583.10	PASS	AB=0.750;AC=9;AF=0.300;AN=30;BaseQRankSum=-0.099;DP=271;FS=0.000;HRun=0;HaplotypeScore=50.7376;InbreedingCoeff=0.3009;MQ=18.66;MQ0=174;MQRankSum=0.165;QD=13.56;ReadPosRankSum=0.495;VQSLOD=1.4755;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,2:2:5.98:109,6,0	./.	./.	./.	0/0:14,0:13:1.92:0,2,133	./.	./.	./.	0/0:10,0:6:5.97:0,6,109	0/1:4,2:5:11.95:168,0,12	1/1:13,2:13:3.01:73,3,0	0/0:9,0:3:0:0,0,0	0/0:6,0:2:3.48:0,3,83	./.	1/1:5,1:2:6.02:175,6,0	./.	./.	0/0:10,0:1:3.01:0,3,98	./.	0/0:11,0:8:2.60:0,3,10	./.	./.	0/0:4,0:4:0.47:0,0,1	0/0:13,0:2:0:0,0,0	1/1:6,1:7:6.02:158,6,0	./.	0/0:9,0:6:1.66:0,2,30	0/0:4,0:1:3.01:0,3,140
chr10	84441294	.	A	AT	462.21	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=2.198;DP=439;FS=7.348;HRun=13;HaplotypeScore=55.6609;InbreedingCoeff=0.8414;MQ=34.16;MQ0=116;MQRankSum=-1.037;QD=4.92;ReadPosRankSum=-1.096;VQSLOD=1.1333;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,14:8:11.98:104,12,0	0/0:7,0:4:11.52:0,12,71	./.	./.	0/0:25,0:21:28.69:0,29,189	1/1:2,13:11:15.02:139,15,0	0/0:10,0:9:8.38:0,8,57	0/0:23,1:18:25.74:0,26,170	0/0:20,1:19:21.59:0,22,135	0/0:19,1:21:12.82:0,13,225	0/0:18,0:18:15.93:0,16,94	0/0:12,0:8:11.82:0,12,82	0/0:6,0:6:5.91:0,6,41	0/0:9,0:7:8.86:0,9,62	1/1:4,0:15:19.97:104,20,0	0/0:18,0:16:20.68:0,21,144	0/0:20,0:12:26.65:0,27,185	0/0:8,0:7:11.58:0,12,84	0/0:10,0:7:11.82:0,12,82	0/0:27,0:23:12.22:0,12,171	0/0:10,0:6:11.88:0,12,82	0/0:16,0:15:26.49:0,26,181	0/0:20,0:20:23.23:0,23,154	0/0:16,0:11:20.83:0,21,144	1/1:2,11:10:11.97:103,12,0	1/1:6,8:13:3:123,3,0	0/0:17,0:12:23.77:0,24,164	1/1:2,0:5:11.36:58,11,0
chr10	84442573	.	TC	T	5187.45	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.918;DP=589;FS=11.888;HRun=3;HaplotypeScore=74.3991;InbreedingCoeff=0.9947;MQ=80.28;MQ0=0;MQRankSum=-0.762;QD=33.04;ReadPosRankSum=4.414;VQSLOD=4.5116;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.23:0,90,1217	1/1:1,8:9:24.08:297,24,0	0/0:14,0:14:38.85:0,39,506	0/0:20,0:20:29.80:0,30,717	0/0:13,0:13:39.09:0,39,507	1/1:0,20:20:60.19:743,60,0	0/0:25,0:25:75.25:0,75,1078	0/0:42,0:42:99:0,120,1673	0/0:25,0:25:51.49:0,51,1013	1/1:2,21:23:66.19:802,66,0	1/1:1,17:18:42.13:520,42,0	0/0:16,0:16:48.16:0,48,690	0/0:19,0:19:54.18:0,54,771	0/0:16,0:16:48.16:0,48,689	0/0:22,0:22:63.20:0,63,888	1/1:1,17:18:45.14:558,45,0	1/1:1,23:24:63.20:781,63,0	0/0:14,0:14:39.13:0,39,556	0/0:26,0:26:66.22:0,66,943	0/0:30,0:30:90.30:0,90,1296	0/0:25,0:25:75.17:0,75,1015	0/0:20,0:20:60.20:0,60,861	0/0:22,0:22:63.21:0,63,904	0/0:21,0:21:63.20:0,63,886	1/1:1,15:16:42.13:521,42,0	1/1:0,23:23:66.21:818,66,0	0/0:31,0:31:93.30:0,93,1318	1/1:1,5:6:12.04:149,12,0
chr10	84443779	.	CTGTGTGTG	C	54.29	PASS	AB=1.000;AC=5;AF=0.114;AN=44;BaseQRankSum=0.963;DP=537;FS=0.000;HRun=0;HaplotypeScore=110.9324;InbreedingCoeff=0.5012;MQ=44.35;MQ0=78;MQRankSum=-0.321;QD=0.92;ReadPosRankSum=0.152;VQSLOD=1.9841;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/1:12,0:12:0:0,0,0	./.	0/0:26,0:10:0.47:0,0,1	0/0:16,0:16:9.01:0,9,235	0/0:17,0:15:12.04:0,12,292	./.	0/0:18,0:11:0.89:0,1,2	0/0:13,0:7:3.01:0,3,70	0/0:22,0:16:12.04:0,12,201	0/0:14,0:15:3.01:0,3,73	0/0:10,0:8:12.04:0,12,297	0/0:11,0:9:9.03:0,9,285	0/0:19,0:15:9.03:0,9,249	1/1:19,0:15:3.01:70,3,0	0/0:24,0:16:12.04:0,12,207	0/0:27,0:20:18.50:0,19,273	0/0:19,0:16:22.30:0,22,513	./.	1/1:21,7:27:3.01:74,3,0	0/0:34,0:20:0:0,0,0	0/0:21,0:19:9.03:0,9,343	0/0:21,0:18:17.82:0,18,552	0/0:20,0:18:24.08:0,24,474	0/0:19,0:18:18.05:0,18,467	0/0:20,0:16:15.05:0,15,513	./.	./.
chr10	84444369	.	TG	T	2497.55	PASS	AB=0.901;AC=27;AF=0.500;AN=54;BaseQRankSum=1.619;DP=383;FS=2.323;HRun=10;HaplotypeScore=52.6124;InbreedingCoeff=0.5955;MQ=64.23;MQ0=13;MQRankSum=1.092;QD=11.30;ReadPosRankSum=3.922;VQSLOD=2.7457;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:25:48.13:0,48,526	./.	0/0:19,0:14:30:0,30,289	0/0:25,0:15:26.57:0,27,243	0/0:14,0:13:15.03:0,15,157	1/1:6,18:24:53.02:449,53,0	1/1:5,13:18:38.01:318,38,0	1/1:8,6:13:11.99:104,12,0	0/1:8,1:9:3.52:4,0,140	0/0:12,0:12:14.89:0,15,113	0/0:8,0:9:2.84:0,3,14	0/0:13,0:13:15.01:0,15,149	0/1:8,1:9:26.95:27,0,175	0/1:12,1:13:5.03:5,0,157	1/1:1,7:7:20.37:165,20,0	0/0:5,0:9:11.90:0,12,60	0/0:7,0:8:3.84:0,4,21	0/0:8,0:7:9.02:0,9,99	1/1:2,9:11:29.03:240,29,0	1/1:4,7:11:20.99:180,21,0	1/1:5,11:15:32.99:285,33,0	0/1:8,1:9:30.30:30,0,126	0/0:11,0:10:21.06:0,21,232	0/1:12,2:13:29.14:29,0,174	1/1:3,13:16:32.99:286,33,0	1/1:4,0:13:16.28:48,16,0	1/1:4,18:22:53.98:467,54,0	1/1:0,0:11:20.37:60,20,0
chr10	84444450	.	G	GAA	972.85	PASS	AB=0.739;AC=17;AF=0.304;AN=56;BaseQRankSum=4.428;DP=320;FS=20.626;HRun=11;HaplotypeScore=74.3747;InbreedingCoeff=0.6590;MQ=44.47;MQ0=10;MQRankSum=-3.542;QD=10.13;ReadPosRankSum=-3.599;VQSLOD=-0.4157;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:16:14.05:43,0,14	1/1:3,0:3:3.01:38,3,0	0/0:7,0:3:5.99:0,6,57	0/0:7,0:1:3:0,3,29	0/0:11,0:11:11.83:0,12,105	1/1:7,5:13:17.55:225,18,0	0/0:12,0:8:5.89:0,6,58	0/0:9,0:9:14.46:0,14,107	0/0:9,0:9:14.89:0,15,134	1/1:10,1:11:11.96:118,12,0	1/1:10,0:12:2.17:8,2,0	0/0:17,0:17:14.51:0,15,144	0/0:14,0:14:8.65:0,9,86	0/0:13,0:13:14.85:0,15,138	0/0:19,0:18:20.06:0,20,193	1/1:7,1:6:14.97:162,15,0	1/1:5,4:8:11.71:137,12,0	0/0:15,0:11:14.75:0,15,143	0/0:13,0:12:10.83:0,11,82	0/0:11,0:11:8.73:0,9,87	0/0:9,0:9:8.94:0,9,84	0/0:12,0:12:5.94:0,6,55	0/0:4,0:3:2.97:0,3,29	0/0:20,0:20:26.65:0,27,241	1/1:11,1:12:12.04:172,12,0	1/1:7,0:10:24:251,24,0	0/0:15,0:14:11.85:0,12,115	0/0:3,0:3:2.74:0,3,12
chr10	84444486	.	C	CA	427.37	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=1.495;DP=431;FS=0.000;HRun=8;HaplotypeScore=59.2543;InbreedingCoeff=0.7294;MQ=59.39;MQ0=6;MQRankSum=-1.141;QD=13.79;ReadPosRankSum=-1.213;VQSLOD=2.9568;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,16:29:48.10:522,48,0	0/0:2,0:2:6:0,6,55	0/0:44,0:20:22.38:0,22,342	0/0:36,0:13:7.10:0,7,118	0/0:13,0:13:27:0,27,246	0/0:14,0:14:32.96:0,33,293	0/0:9,0:9:24:0,24,216	0/0:16,0:13:36.02:0,36,329	0/0:17,0:17:41.91:0,42,368	0/0:11,0:11:27.01:0,27,244	0/0:13,0:13:24.01:0,24,219	0/0:13,0:13:29.96:0,30,266	0/0:9,0:8:11.98:0,12,104	0/0:14,0:13:14.98:0,15,135	0/0:19,0:17:26.84:0,27,246	0/0:12,0:10:18.93:0,19,188	0/0:14,0:14:11.90:0,12,204	0/0:16,0:15:21:0,21,190	0/0:26,0:24:63.02:0,63,570	0/0:11,0:11:33:0,33,297	0/0:16,0:16:26.98:0,27,246	0/0:11,0:11:23.99:0,24,214	0/0:3,0:3:9:0,9,82	0/0:25,0:25:50.52:0,51,460	0/0:6,0:6:18.01:0,18,165	0/0:14,0:14:32.97:0,33,287	0/0:13,0:13:30:0,30,274	./.
chr10	84447906	.	G	GA	2092.25	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-4.616;DP=521;FS=2.824;HRun=9;HaplotypeScore=55.5186;InbreedingCoeff=0.9875;MQ=61.65;MQ0=3;MQRankSum=-2.453;QD=23.25;ReadPosRankSum=-0.613;VQSLOD=4.2928;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:63.56:0,64,678	1/1:1,10:11:30.06:320,30,0	0/0:14,0:12:23.17:0,23,175	0/0:11,0:10:11.29:0,11,87	0/0:25,0:25:65.95:0,66,568	0/0:21,0:21:47.96:0,48,417	0/0:16,0:16:44.99:0,45,391	0/0:29,0:30:74:0,74,628	0/0:14,0:14:38.99:0,39,339	1/1:3,22:25:66.16:719,66,0	1/1:4,23:28:56.95:597,57,0	0/0:23,0:23:68.97:0,69,595	0/0:16,0:16:41.99:0,42,364	0/0:23,0:23:41.95:0,42,365	0/0:14,0:14:38.97:0,39,335	1/1:1,6:7:18.05:199,18,0	1/1:3,16:19:39.11:431,39,0	0/0:12,0:12:29.99:0,30,260	0/0:16,0:18:49.05:0,49,400	0/0:24,0:24:59.97:0,60,521	0/0:19,0:19:38.67:0,39,352	0/0:18,0:18:50.99:0,51,442	0/0:18,0:18:47.99:0,48,417	0/0:16,0:16:41.99:0,42,364	0/0:16,0:17:24.64:0,25,298	0/0:22,0:22:59.98:0,60,521	0/0:19,0:19:50.94:0,51,436	0/0:8,0:8:20.98:0,21,182
chr10	84448846	.	C	CA	8750.17	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-17.135;DP=605;FS=2.245;HRun=1;HaplotypeScore=53.1473;InbreedingCoeff=0.9805;MQ=87.11;MQ0=0;MQRankSum=-2.298;QD=38.55;ReadPosRankSum=2.318;VQSLOD=5.3959;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:78.26:1169,78,0	1/1:1,4:5:12.04:180,12,0	0/0:19,0:19:54.16:0,54,677	0/0:23,0:23:57.14:0,57,766	0/0:34,0:34:99:0,99,1270	1/1:1,19:20:54.18:809,54,0	0/0:18,0:18:48.15:0,48,605	0/0:33,0:33:90.28:0,90,1146	0/0:14,0:14:42.12:0,42,531	1/1:1,28:29:84.21:1187,84,0	1/1:0,23:23:60.16:874,60,0	0/0:23,0:23:69.19:0,69,867	0/0:22,0:22:66.20:0,66,843	0/0:24,0:24:72.23:0,72,934	1/1:0,18:18:45.15:674,45,0	1/1:0,17:17:48.16:719,48,0	1/1:1,27:28:72.20:1054,72,0	0/0:25,0:25:72.20:0,72,916	0/0:15,0:15:36.11:0,36,454	0/0:31,0:31:93.30:0,93,1207	0/0:19,0:19:51.17:0,51,662	0/0:15,0:15:42.14:0,42,544	0/0:20,0:20:51.17:0,51,662	0/0:18,0:18:51.17:0,51,662	1/1:0,15:15:45.15:665,45,0	1/1:1,32:33:93.27:1328,93,0	0/0:25,0:25:72.23:0,72,934	1/1:2,4:6:6.02:90,6,0
chr10	84449836	.	AGTGAGT	A	2310.54	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=6.473;DP=772;FS=4.128;HRun=0;HaplotypeScore=190.9617;InbreedingCoeff=0.6409;MQ=79.87;MQ0=4;MQRankSum=0.589;QD=11.33;ReadPosRankSum=1.512;VQSLOD=2.4123;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:11.96:111,12,0	1/1:11,3:14:23.95:257,24,0	0/0:38,0:32:23.17:0,23,258	0/0:54,0:43:10.55:0,11,187	0/0:18,0:18:33.06:0,33,870	0/1:18,0:18:14.02:14,0,519	0/0:32,0:32:53.97:0,54,1475	0/0:28,0:28:36.04:0,36,539	0/0:26,0:26:63.19:0,63,1749	1/1:19,1:20:33.05:434,33,0	1/1:21,0:21:26.22:283,26,0	0/0:28,0:28:72.15:0,72,1719	0/0:38,0:38:78.16:0,78,1947	0/0:24,0:24:48.05:0,48,1137	0/0:36,0:36:87.21:0,87,1201	1/1:24,2:26:56.61:797,57,0	1/1:32,1:33:44.98:481,45,0	0/0:17,0:17:33.04:0,33,801	0/0:20,0:19:20.99:0,21,457	0/0:27,0:27:63.18:0,63,1796	0/0:73,0:72:99:0,153,3571	0/0:26,0:26:69.11:0,69,1586	0/0:22,0:23:51.22:0,51,1048	0/0:44,0:44:99:0,99,2833	0/1:21,0:21:63.04:63,0,398	0/1:19,0:19:15.77:16,0,626	0/0:16,0:16:36.08:0,36,838	0/1:9,0:9:48.85:49,0,178
chr10	84449860	.	TGTGA	T	3590.50	PASS	AB=0.993;AC=15;AF=0.268;AN=56;BaseQRankSum=7.513;DP=785;FS=6.100;HRun=0;HaplotypeScore=173.6187;InbreedingCoeff=0.5451;MQ=59.49;MQ0=11;MQRankSum=3.054;QD=16.62;ReadPosRankSum=-0.306;VQSLOD=2.4927;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:17.32:77,0,17	1/1:8,10:18:38.94:486,39,0	0/0:21,0:13:29.12:0,29,288	0/0:34,0:18:17.38:0,17,195	0/0:15,0:15:42.06:0,42,812	0/1:22,0:22:99:128,0,289	0/0:35,0:35:92.96:0,93,1751	0/0:33,0:33:86.67:0,87,1099	0/0:31,0:31:80.95:0,81,1649	1/1:14,3:17:30.80:486,31,0	1/1:7,16:22:31.77:536,32,0	0/0:31,0:31:93.17:0,93,1706	0/0:41,0:41:98.95:0,99,1811	0/0:19,0:19:54.03:0,54,976	0/0:43,0:41:99:0,114,809	1/1:18,8:26:68.68:873,69,0	1/1:16,9:25:54.07:756,54,0	0/0:19,0:19:34.57:0,35,906	0/0:18,0:14:30.83:0,31,427	0/0:27,0:26:75.20:0,75,1671	0/0:77,0:74:99:0,191,3340	0/0:29,0:29:87.14:0,87,1580	0/0:27,0:27:69.27:0,69,1083	0/0:48,0:48:99:0,124,2645	0/1:28,1:29:99:131,0,313	0/1:27,0:27:68.03:68,0,573	0/0:20,0:20:59.68:0,60,876	0/1:11,0:11:48.76:49,0,198
chr10	84449862	.	TGA	T	2120.34	PASS	AB=0.989;AC=15;AF=0.268;AN=56;BaseQRankSum=12.450;DP=776;FS=4.692;HRun=0;HaplotypeScore=147.3549;InbreedingCoeff=0.4172;MQ=58.68;MQ0=11;MQRankSum=0.462;QD=8.16;ReadPosRankSum=2.306;VQSLOD=3.0097;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:16.47:117,16,0	0/1:18,0:18:43.04:149,0,43	0/0:21,1:14:17.97:0,18,263	0/0:31,0:15:11.90:0,12,162	0/0:15,0:15:30.78:0,31,646	1/1:21,1:22:22.02:309,22,0	0/0:34,0:34:92.14:0,92,1408	0/0:33,0:33:88.29:0,88,1132	0/0:30,0:30:69.29:0,69,1235	0/1:18,0:18:31.41:251,0,31	0/1:22,1:22:0.87:183,0,1	0/0:31,0:31:88.11:0,88,1327	0/0:36,0:36:87.91:0,88,1433	0/0:19,0:19:41.81:0,42,747	0/1:43,0:41:82.26:223,0,82	0/1:26,0:26:2.17:356,0,2	1/1:23,1:24:4.12:281,4,0	0/0:19,0:19:25.88:0,26,697	0/0:18,0:14:36.97:0,37,400	0/0:26,0:25:75.21:0,75,1286	0/0:78,0:75:99:0,121,2480	0/0:31,0:31:92.72:0,93,1262	0/0:25,0:25:69.28:0,69,960	0/0:48,0:48:99:0,103,2038	1/1:29,0:29:32.96:227,33,0	0/1:27,1:28:99:130,0,208	0/0:20,0:20:44.65:0,45,752	0/1:11,0:11:68.11:68,0,93
chr10	84449864	.	AGT	A	1510.26	PASS	AB=0.991;AC=13;AF=0.232;AN=56;BaseQRankSum=9.808;DP=788;FS=7.231;HRun=0;HaplotypeScore=151.4901;InbreedingCoeff=0.0773;MQ=58.73;MQ0=11;MQRankSum=1.921;QD=4.73;ReadPosRankSum=4.556;VQSLOD=2.4524;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,4:15:11.92:109,12,0	0/1:18,0:18:38.96:39,0,100	0/0:23,0:15:10.78:0,11,107	0/0:32,0:16:9.03:0,9,131	0/0:13,1:14:0.15:0,0,468	0/1:22,0:22:60.25:60,0,204	0/0:36,0:36:71.30:0,71,1087	0/0:33,0:33:55.97:0,56,668	0/0:30,1:31:23.33:0,23,845	0/1:18,0:18:40.69:41,0,108	0/1:24,0:23:42.79:74,0,43	0/0:32,0:32:43.54:0,44,840	0/0:33,3:36:41.72:0,42,913	0/0:19,1:20:3.16:0,3,511	1/1:20,24:42:99:1131,100,0	0/1:26,0:26:60.76:107,0,61	0/1:25,0:25:46.72:73,0,47	0/0:20,0:20:28.90:0,29,570	0/0:18,0:14:26.53:0,27,256	0/0:26,0:25:63.19:0,63,961	0/1:72,3:72:27.36:27,0,1473	0/0:32,0:32:48.95:0,49,807	0/0:24,0:24:45.32:0,45,587	0/0:51,0:51:99:0,115,1595	0/1:31,0:31:1.82:2,0,255	0/0:30,0:30:52.93:0,53,858	0/1:20,1:21:1.69:2,0,564	0/0:11,0:11:15.84:0,16,284
chr10	84449884	.	T	TGA	2244.93	PASS	AB=0.950;AC=15;AF=0.268;AN=56;BaseQRankSum=10.868;DP=818;FS=0.782;HRun=0;HaplotypeScore=171.2849;InbreedingCoeff=0.6759;MQ=58.43;MQ0=8;MQRankSum=-0.180;QD=9.32;ReadPosRankSum=-0.190;VQSLOD=3.0312;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,1:21:8.59:42,9,0	1/1:14,4:18:38:394,38,0	0/0:32,0:22:56.06:0,56,582	0/0:25,0:15:28.15:0,28,313	0/0:16,0:16:42.07:0,42,468	1/1:22,1:23:16.34:124,16,0	0/0:36,0:36:60.58:0,61,845	0/0:41,0:41:80.98:0,81,795	0/0:31,0:32:68.95:0,69,742	1/1:19,3:22:4.46:405,4,0	1/1:24,3:26:17.96:365,18,0	0/0:30,0:30:66.10:0,66,716	0/0:33,0:33:35.90:0,36,580	0/0:17,0:17:45.08:0,45,506	0/0:41,0:39:76.53:0,77,741	0/1:24,4:28:16.66:361,0,17	1/1:25,3:28:63.02:583,63,0	0/0:23,0:25:7.06:0,7,477	0/0:16,0:16:20.99:0,21,220	0/0:26,0:26:72.13:0,72,812	0/0:68,0:66:99:0,132,1377	0/0:25,0:26:62.94:0,63,671	0/0:28,0:28:59.13:0,59,585	0/0:51,0:51:99:0,120,1330	0/1:35,0:35:12.71:129,0,13	0/1:38,1:39:29.04:29,0,785	0/0:23,0:24:65.88:0,66,669	0/0:9,0:9:20.55:0,21,229
chr10	84449926	.	A	ATGTG	7170.71	PASS	AB=0.839;AC=19;AF=0.339;AN=56;BaseQRankSum=4.096;DP=842;FS=1.134;HRun=0;HaplotypeScore=185.5200;InbreedingCoeff=0.6391;MQ=64.55;MQ0=5;MQRankSum=-0.962;QD=21.66;ReadPosRankSum=1.720;VQSLOD=4.5745;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,1:32:15.52:301,16,0	1/1:9,3:13:19.35:409,19,0	0/0:44,0:29:21.88:0,22,309	0/1:35,0:25:18.82:19,0,177	0/0:18,0:18:39.13:0,39,610	1/1:7,0:18:16.47:75,16,0	0/0:31,0:31:22.41:0,22,778	0/0:47,0:47:74.38:0,74,1522	0/0:31,0:31:57.18:0,57,908	1/1:6,19:29:66.16:1217,66,0	1/1:15,6:23:42.08:884,42,0	0/0:23,0:24:46.86:0,47,850	0/0:24,0:25:60.18:0,60,940	0/0:24,0:25:36.19:0,36,884	1/1:22,17:41:84.32:1950,84,0	0/1:9,20:31:0.32:978,0,0	1/1:11,19:31:44.67:1081,45,0	0/0:24,0:25:48.16:0,48,743	0/0:25,0:24:39.06:0,39,576	0/0:19,0:20:48.15:0,48,728	0/0:55,0:53:78.92:0,79,1442	0/0:26,0:26:60.14:0,60,913	0/0:32,0:32:87.26:0,87,1317	0/0:51,0:51:99:0,100,1523	0/1:14,0:32:60.03:60,0,79	0/1:32,1:33:99:169,0,471	0/0:30,0:31:84.01:0,84,1274	0/1:12,0:12:28.26:28,0,151
chr10	84449945	.	T	TGTGTGA	4762.37	PASS	AB=0.928;AC=11;AF=0.196;AN=56;BaseQRankSum=12.417;DP=826;FS=1.134;HRun=0;HaplotypeScore=200.0895;InbreedingCoeff=-0.0205;MQ=60.20;MQ0=10;MQRankSum=-2.277;QD=17.01;ReadPosRankSum=2.221;VQSLOD=4.5642;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,24:41:15.52:470,16,0	0/1:10,0:10:23.97:223,0,24	0/0:32,0:16:34.95:0,35,435	0/1:27,0:15:13.06:13,0,203	0/0:14,0:16:42.13:0,42,834	0/0:19,0:19:28.24:0,28,165	0/0:31,0:31:19.55:0,20,1160	0/0:46,0:46:99:0,110,2084	0/0:25,0:25:66.17:0,66,1277	0/1:32,0:32:84.06:734,0,84	0/1:21,0:21:25.89:495,0,26	0/0:24,0:24:64.97:0,65,1166	0/0:29,0:30:84.13:0,84,1510	0/0:28,0:29:54.48:0,54,1429	0/1:43,0:43:53.82:1192,0,54	0/1:35,0:35:99:505,0,170	0/1:32,0:32:68.86:512,0,69	0/0:21,0:21:35.16:0,35,1053	0/0:25,0:23:59.99:0,60,978	0/0:21,0:23:69.13:0,69,1200	0/0:51,0:49:99:0,114,2127	0/0:28,0:30:86.77:0,87,1435	0/0:35,0:37:99:0,105,1923	0/0:48,0:48:99:0,127,2309	0/0:27,0:28:31.91:0,32,305	0/1:15,0:28:99:485,0,386	0/0:30,0:31:93.26:0,93,1837	0/1:5,0:10:99:134,0,150
chr10	84450588	.	G	GGTGT	1017.98	PASS	AB=0.958;AC=21;AF=0.389;AN=54;BaseQRankSum=-2.004;DP=601;FS=17.566;HRun=0;HaplotypeScore=123.1754;InbreedingCoeff=0.5458;MQ=64.47;MQ0=8;MQRankSum=0.003;QD=3.44;ReadPosRankSum=-2.061;VQSLOD=0.6756;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,17:38:22.39:480,22,0	0/0:3,0:7:8.87:0,9,84	./.	0/1:18,0:9:0:0,0,0	0/0:17,0:17:9.01:0,9,118	0/1:23,0:24:12.23:12,0,363	0/1:19,1:26:0:0,0,0	1/1:28,0:28:12.40:132,12,0	0/0:14,0:16:11.53:0,12,270	0/0:14,0:21:18.02:0,18,168	0/0:13,0:18:5.97:0,6,48	0/0:20,0:20:6.02:0,6,94	0/0:27,0:26:12.03:0,12,172	0/0:21,0:21:16.29:0,16,218	0/0:19,0:29:24.27:0,24,200	0/0:5,0:14:12.01:0,12,111	0/0:14,0:22:12.48:0,12,112	0/0:25,0:25:27.09:0,27,411	1/1:15,0:15:4.83:57,5,0	1/1:14,0:16:3.01:52,3,0	1/1:16,14:36:3.01:71,3,0	0/1:24,0:24:0.49:0,0,129	0/1:17,0:17:11.45:11,0,125	0/0:29,0:32:6.89:0,7,445	0/0:21,0:21:23.79:0,24,280	1/1:17,0:18:13.02:193,13,0	1/1:18,1:22:6.02:123,6,0	1/1:8,0:10:3.01:53,3,0
chr10	84452921	.	AT	A	963.82	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.430;DP=639;FS=9.888;HRun=4;HaplotypeScore=62.6145;InbreedingCoeff=0.9995;MQ=85.97;MQ0=0;MQRankSum=-4.354;QD=30.12;ReadPosRankSum=1.830;VQSLOD=3.6333;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,1745	0/0:14,0:14:42.14:0,42,588	0/0:25,0:25:72.18:0,72,921	0/0:18,0:18:54.17:0,54,718	0/0:19,0:19:54.18:0,54,755	1/1:0,15:15:45.13:525,45,0	0/0:20,0:20:60.13:0,60,784	0/0:37,0:37:96.31:0,96,1330	0/0:26,0:26:75.20:0,75,1011	0/0:30,0:30:87.29:0,87,1205	0/0:19,0:19:54.18:0,54,755	0/0:27,0:27:81.27:0,81,1128	0/0:16,0:16:48.16:0,48,671	0/0:19,0:19:51.13:0,51,661	0/0:24,0:24:72.24:0,72,1008	0/0:15,0:15:45.15:0,45,630	0/0:28,0:28:81.27:0,81,1134	0/0:24,0:24:72.22:0,72,989	0/0:19,0:19:28.26:0,28,592	0/0:33,0:33:99:0,99,1386	0/0:20,0:20:57.19:0,57,798	0/0:20,0:20:60.19:0,60,825	0/0:13,0:13:36.12:0,36,504	0/0:15,0:15:45.14:0,45,612	1/1:0,17:17:48.14:560,48,0	0/0:35,0:34:99:0,102,1411	0/0:33,0:33:96.29:0,96,1323	0/0:16,0:16:45.15:0,45,630
chr10	84455201	.	TC	T	1629.74	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.608;DP=960;FS=4.529;HRun=1;HaplotypeScore=53.5317;InbreedingCoeff=0.9278;MQ=34.84;MQ0=386;MQRankSum=-2.964;QD=18.31;ReadPosRankSum=-2.109;VQSLOD=3.2021;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:15:35.41:0,35,411	0/0:16,0:15:45.15:0,45,641	0/0:14,0:3:9.03:0,9,127	0/0:11,0:4:8.96:0,9,101	0/0:23,0:14:38.25:0,38,487	0/0:27,0:13:33.11:0,33,469	0/0:34,0:17:36.12:0,36,512	0/0:39,0:12:13.11:0,13,346	0/0:23,0:15:36.12:0,36,514	0/0:35,0:27:78.25:0,78,1078	0/0:20,0:16:42.14:0,42,598	0/0:31,0:18:51.17:0,51,715	0/0:25,0:10:27.09:0,27,384	0/0:38,0:18:46.40:0,46,643	0/0:24,0:17:45.15:0,45,638	0/0:29,0:22:60.20:0,60,853	0/0:64,0:29:75.22:0,75,1041	0/0:50,0:19:42.08:0,42,546	0/0:28,0:15:45.11:0,45,591	0/0:31,0:22:66.22:0,66,938	0/0:31,0:13:33.11:0,33,470	0/0:38,0:17:43.39:0,43,602	0/0:33,0:18:54.15:0,54,733	0/0:114,0:39:57.59:0,58,1151	0/0:24,0:23:66.22:0,66,938	1/1:24,20:26:20.07:832,20,0	0/0:35,0:21:57.16:0,57,765	1/1:19,26:26:66.22:918,66,0
chr10	84455354	.	CCTT	C	607.46	PASS	AB=0.939;AC=20;AF=0.400;AN=50;BaseQRankSum=4.342;DP=655;FS=2.133;HRun=0;HaplotypeScore=121.1819;InbreedingCoeff=0.3903;MQ=24.02;MQ0=259;MQRankSum=-5.479;QD=2.01;ReadPosRankSum=-1.195;VQSLOD=2.4465;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:11:7.11:7,0,45	0/0:7,0:7:1.46:0,1,12	./.	./.	0/0:28,0:20:11.21:0,11,122	0/1:26,0:10:3.08:101,0,3	1/1:35,0:7:5.97:56,6,0	./.	0/0:22,0:8:12.03:0,12,180	1/1:25,0:13:6.79:35,7,0	0/1:29,0:18:11.13:11,0,11	0/0:32,0:13:32.80:0,33,379	0/0:23,0:14:15.32:0,15,244	0/0:26,0:14:19.71:0,20,269	0/0:13,0:11:16.87:0,17,109	1/1:16,0:14:5.02:23,5,0	0/1:35,0:13:5.23:5,0,28	0/0:17,0:6:0.10:0,0,8	1/1:12,0:2:1.25:3,1,0	1/1:13,12:15:16.23:181,16,0	1/1:18,0:8:14.81:147,15,0	0/0:57,0:24:36.39:0,36,464	0/0:27,0:13:5.72:0,6,208	0/0:58,0:22:18.02:0,18,229	1/1:13,0:12:12.13:74,12,0	0/1:22,0:9:3.71:4,0,83	0/1:8,11:13:10.56:120,0,11	0/0:16,0:3:5.93:0,6,40
chr10	84455367	.	CTT	C	659.80	PASS	AB=0.948;AC=15;AF=0.278;AN=54;BaseQRankSum=7.122;DP=631;FS=4.476;HRun=2;HaplotypeScore=149.1628;InbreedingCoeff=0.0757;MQ=25.69;MQ0=208;MQRankSum=-2.696;QD=2.81;ReadPosRankSum=1.959;VQSLOD=-0.4553;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:11:12.91:0,13,125	1/1:7,1:7:7.63:54,8,0	./.	0/0:3,0:1:3.01:0,3,39	0/0:33,2:26:34.47:0,34,426	0/0:26,0:12:4.44:0,4,135	0/0:34,0:13:16.12:0,16,86	0/0:25,0:1:1.25:0,1,3	0/0:20,0:7:14.97:0,15,260	0/1:25,0:16:3.81:123,0,4	1/1:26,2:19:10.30:150,10,0	0/0:28,0:15:41.73:0,42,734	0/1:16,2:14:48.58:49,0,493	0/1:24,2:14:51.36:51,0,518	0/0:15,0:13:24.08:0,24,398	1/1:15,1:14:30.73:172,31,0	0/1:31,0:15:11.31:11,0,101	0/1:15,1:7:31.01:35,0,31	0/1:10,1:4:32.75:40,0,33	0/0:23,0:17:14.53:0,15,90	0/1:20,1:12:15.69:16,0,88	0/0:52,0:23:42.61:0,43,730	0/0:30,1:19:1.90:0,2,359	0/0:47,0:20:21.54:0,22,400	0/0:16,0:15:1.41:0,1,97	0/1:20,1:13:73.09:73,0,241	0/1:13,1:14:22.22:44,0,22	0/0:13,0:5:5.39:0,5,110
chr10	84455372	.	TCTC	T	660.61	PASS	AB=0.990;AC=15;AF=0.278;AN=54;BaseQRankSum=2.539;DP=628;FS=13.096;HRun=0;HaplotypeScore=168.1156;InbreedingCoeff=-0.0087;MQ=25.99;MQ0=190;MQRankSum=-0.769;QD=2.25;ReadPosRankSum=-0.805;VQSLOD=1.9638;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:11:9.14:9,0,22	0/0:8,0:7:11.63:0,12,76	./.	0/0:3,0:1:2.74:0,3,12	0/0:34,0:26:3.49:0,3,169	0/1:22,3:14:0.14:249,0,0	0/1:35,0:16:45.13:72,0,45	0/1:28,0:5:9.92:36,0,10	0/0:19,0:8:7.33:0,7,168	0/1:23,0:16:36.86:37,0,43	0/0:27,0:19:14.58:0,15,92	0/0:27,0:15:18.73:0,19,296	0/0:18,0:14:11.26:0,11,263	0/0:24,0:13:23.01:0,23,230	1/1:14,0:13:2.55:31,3,0	0/0:17,0:14:12.10:0,12,108	0/0:31,0:17:1.91:0,2,86	0/1:16,0:7:12.05:12,0,17	0/0:13,0:5:10.55:0,11,51	0/1:24,0:18:1.27:62,0,1	0/1:19,0:13:36.87:56,0,37	0/0:52,0:26:15.99:0,16,409	0/1:29,0:18:1.34:1,0,230	0/0:42,0:20:20.96:0,21,315	1/1:12,4:16:3.76:190,4,0	0/1:21,0:13:9.11:9,0,101	0/1:16,0:17:26.18:41,0,26	0/0:14,0:6:14.27:0,14,83
chr10	84455391	.	TTCCTCC	T	599.96	PASS	AB=0.881;AC=4;AF=0.077;AN=52;BaseQRankSum=0.856;DP=534;FS=1.756;HRun=0;HaplotypeScore=194.3547;InbreedingCoeff=0.4334;MQ=29.54;MQ0=74;MQRankSum=-2.156;QD=9.23;ReadPosRankSum=-0.328;VQSLOD=2.9176;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:13:2.71:0,3,188	0/0:10,0:9:9.82:0,10,52	./.	./.	0/0:25,0:21:19.57:0,20,422	1/1:19,2:18:15.69:411,16,0	0/0:23,0:18:35.19:0,35,445	0/0:34,0:21:46.17:0,46,542	0/0:27,0:17:12.51:0,13,303	0/0:20,0:16:15.61:0,16,215	0/0:18,0:14:8.06:0,8,74	0/0:28,0:22:20.78:0,21,406	0/0:26,0:23:21.48:0,21,408	0/0:15,0:13:15.71:0,16,213	0/0:17,0:17:6.76:0,7,37	0/0:17,0:13:22.97:0,23,177	0/0:19,0:13:10.28:0,10,117	0/0:12,0:10:10.54:0,11,96	0/0:12,0:5:13.89:0,14,154	0/0:18,0:17:30.23:0,30,562	0/0:23,0:18:23.98:0,24,400	0/1:28,0:22:4.41:4,0,461	0/0:13,0:12:13.32:0,13,491	0/0:32,0:23:19.88:0,20,559	0/1:11,5:15:3.59:289,0,4	0/0:20,0:13:32.44:0,32,339	0/0:15,0:15:14.01:0,14,120	0/0:13,0:9:21.06:0,21,321
chr10	84455404	.	TCCTC	T	1362.11	PASS	AB=1.000;AC=28;AF=0.538;AN=52;BaseQRankSum=7.871;DP=478;FS=23.148;HRun=0;HaplotypeScore=174.1329;InbreedingCoeff=-0.1430;MQ=30.35;MQ0=53;MQRankSum=-3.985;QD=3.95;ReadPosRankSum=1.634;VQSLOD=1.3697;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:11:3.08:3,0,93	1/1:8,0:7:14.73:96,15,0	./.	./.	0/1:19,0:16:99:113,0,316	1/1:20,0:18:19.25:146,19,0	0/1:23,0:18:19.30:19,0,306	0/0:36,0:24:11.93:0,12,582	0/0:28,0:18:2.10:0,2,203	1/1:20,0:18:7.82:143,8,0	1/1:11,0:9:3.81:98,4,0	0/0:24,0:21:20.04:0,20,428	0/1:22,0:21:71.10:71,0,303	0/1:13,0:13:77.09:77,0,150	1/1:2,13:17:12:164,12,0	0/1:13,0:11:11.56:155,0,12	0/1:14,0:10:9.33:51,0,9	1/1:8,0:9:3.65:36,4,0	0/1:15,0:5:53.94:54,0,71	0/0:16,0:15:27.28:0,27,632	0/1:27,0:23:40.24:40,0,399	0/1:21,0:17:14.54:15,0,388	0/1:11,0:11:40.77:41,0,374	0/1:25,0:20:15.64:16,0,480	1/1:14,0:13:16.63:92,17,0	0/1:16,0:12:38.25:38,0,85	0/1:11,0:11:26.29:59,0,26	0/0:9,0:8:11.09:0,11,130
chr10	84455571	.	TTCC	T	1736.08	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=9.970;DP=723;FS=8.907;HRun=0;HaplotypeScore=186.9737;InbreedingCoeff=0.5683;MQ=43.31;MQ0=20;MQRankSum=-3.987;QD=9.98;ReadPosRankSum=0.883;VQSLOD=2.6163;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:18:20.77:21,0,83	0/0:9,0:9:24.08:0,24,465	0/0:12,0:4:9.03:0,9,168	0/0:21,0:10:11.58:0,12,223	0/0:29,0:29:28.43:0,28,764	1/1:15,17:32:43.71:505,44,0	0/0:36,0:32:28.53:0,29,926	0/0:32,0:29:25.25:0,25,372	0/0:37,0:32:72.95:0,73,1292	0/0:26,0:23:40.60:0,41,766	0/0:13,0:13:30.10:0,30,570	0/0:42,0:41:84.25:0,84,1562	0/0:34,0:33:60.85:0,61,1388	0/0:20,0:19:27.01:0,27,613	1/1:19,14:32:68.63:887,69,0	0/0:15,0:15:45.13:0,45,853	0/0:23,0:23:57.06:0,57,1077	0/0:22,0:21:54.08:0,54,1040	0/0:16,0:11:14.96:0,15,271	0/0:36,0:36:66.24:0,66,1375	0/0:23,0:22:43.34:0,43,746	0/0:45,0:43:28.01:0,28,864	0/1:30,0:30:17.46:17,0,641	0/0:39,0:39:90.14:0,90,1673	1/1:16,15:30:46.35:457,46,0	0/1:24,0:26:4.07:4,0,256	0/0:16,0:16:39.13:0,39,709	0/0:2,0:2:0.79:0,1,29
chr10	84456063	.	GTA	G	2132.28	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.293;DP=506;FS=0.560;HRun=0;HaplotypeScore=57.1905;InbreedingCoeff=0.9955;MQ=85.11;MQ0=3;MQRankSum=-2.543;QD=36.14;ReadPosRankSum=0.888;VQSLOD=5.7144;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,2258	0/0:8,0:8:24.08:0,24,463	0/0:18,0:18:49.75:0,50,972	0/0:15,0:15:45.15:0,45,849	0/0:18,0:18:54.17:0,54,1004	1/1:0,17:15:33.11:505,33,0	0/0:25,0:25:75.23:0,75,1401	0/0:20,0:20:57.20:0,57,1086	0/0:19,0:19:57.20:0,57,1096	0/0:13,0:13:36.12:0,36,666	0/0:7,0:7:21.07:0,21,405	0/0:17,0:17:51.17:0,51,984	0/0:9,0:9:27.09:0,27,522	0/0:23,0:23:69.22:0,69,1287	0/0:32,0:32:93.32:0,93,1796	0/0:17,0:17:48.16:0,48,927	0/0:22,0:22:63.22:0,63,1205	0/0:16,0:17:47.16:0,47,839	0/0:17,0:17:51.17:0,51,985	0/0:10,0:10:23.88:0,24,463	0/0:30,0:30:90.31:0,90,1726	0/0:8,0:8:24.07:0,24,430	0/0:7,0:7:21.07:0,21,405	0/0:25,0:25:75.26:0,75,1435	1/1:0,12:11:33.11:505,33,0	1/1:1,18:19:51.17:777,51,0	0/0:28,0:28:84.27:0,84,1588	1/1:0,11:11:33.11:505,33,0
chr10	84456289	.	TTGGGGGTGGGG	T	2641.19	PASS	AB=0.538;AC=3;AF=0.054;AN=56;BaseQRankSum=8.112;DP=224;FS=6.202;HRun=0;HaplotypeScore=82.5683;InbreedingCoeff=0.3176;MQ=83.63;MQ0=1;MQRankSum=-4.526;QD=69.51;ReadPosRankSum=1.614;VQSLOD=3.0554;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:42.12:0,42,1827	0/0:4,0:4:12.04:0,12,437	0/0:9,0:9:24:0,24,569	0/0:11,0:10:17.89:0,18,547	0/0:9,0:9:24.08:0,24,1102	0/0:13,0:13:33.11:0,33,1501	0/0:5,0:5:15.04:0,15,571	0/0:7,0:7:18.06:0,18,804	0/0:5,0:5:15.05:0,15,641	0/0:5,0:5:15.05:0,15,815	0/0:4,0:4:12.03:0,12,414	0/0:3,0:3:9.03:0,9,501	0/0:6,0:6:18.05:0,18,880	0/0:2,0:2:6.02:0,6,219	0/0:6,0:6:15.05:0,15,581	0/0:8,0:8:24.07:0,24,1171	0/0:13,0:13:36.12:0,36,1402	0/0:2,0:2:6.02:0,6,129	0/0:1,0:1:3.01:0,3,55	0/0:10,0:10:30.09:0,30,1483	0/0:14,0:14:33.11:0,33,1719	0/0:8,0:8:24.08:0,24,1117	0/0:10,0:10:27.09:0,27,1216	0/0:2,0:2:3.01:0,3,103	0/0:7,0:7:15.02:0,15,516	0/1:5,30:35:80.90:2527,0,81	0/0:7,0:7:21.06:0,21,720	1/1:0,3:3:6.02:208,6,0
chr10	84459651	.	G	GA	3547.35	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-12.761;DP=652;FS=13.714;HRun=2;HaplotypeScore=62.1366;InbreedingCoeff=0.9956;MQ=76.65;MQ0=0;MQRankSum=-1.707;QD=37.34;ReadPosRankSum=2.358;VQSLOD=3.1209;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,1666	1/1:0,7:7:15.05:216,15,0	0/0:16,0:16:41.84:0,42,464	0/0:17,0:16:41.86:0,42,480	0/0:15,0:15:39.11:0,39,470	0/0:24,0:24:69.22:0,69,853	0/0:18,0:18:51.13:0,51,605	0/0:34,0:34:81.24:0,81,994	0/0:18,0:18:54.16:0,54,657	1/1:0,17:17:48.16:690,48,0	1/1:3,18:21:54.18:777,54,0	0/0:24,0:24:72.23:0,72,892	0/0:23,0:23:66.16:0,66,778	0/0:22,0:22:63.18:0,63,768	0/0:20,0:20:54.16:0,54,656	1/1:1,20:21:23.02:784,23,0	1/1:1,28:29:75.25:1080,75,0	0/0:19,0:19:44.53:0,45,498	0/0:34,0:34:96.27:0,96,1154	0/0:33,0:33:96.29:0,96,1177	0/0:24,0:24:72.21:0,72,880	0/0:16,0:16:48.15:0,48,595	0/0:14,0:14:39.09:0,39,456	0/0:33,0:32:93.29:0,93,1152	0/0:22,0:22:63.18:0,63,768	0/0:32,1:33:47.05:0,47,1016	0/0:31,0:31:90.28:0,90,1115	0/0:18,0:18:54.17:0,54,669
chr10	84461248	.	TCA	T	1616.44	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.548;DP=671;FS=1.284;HRun=0;HaplotypeScore=77.5969;InbreedingCoeff=0.9992;MQ=93.06;MQ0=0;MQRankSum=-4.174;QD=36.74;ReadPosRankSum=0.609;VQSLOD=5.3503;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,43:44:99:1711,120,0	0/0:11,0:11:33.11:0,33,576	0/0:34,0:34:93.32:0,93,1671	0/0:23,0:23:53.75:0,54,937	0/0:25,0:25:72.25:0,72,1311	0/0:17,0:17:51.17:0,51,917	0/0:25,0:25:63.18:0,63,1090	0/0:29,0:29:87.30:0,87,1584	0/0:23,0:23:69.22:0,69,1221	0/0:27,0:27:78.27:0,78,1429	0/0:11,0:11:30.10:0,30,550	0/0:35,0:35:99:0,99,1800	0/0:20,0:20:57.20:0,57,1045	0/0:24,0:24:69.24:0,69,1261	0/0:23,0:23:69.22:0,69,1235	0/0:27,0:27:78.27:0,78,1430	0/0:41,0:41:99:0,123,2231	0/0:22,0:22:66.23:0,66,1210	0/0:21,0:21:63.22:0,63,1149	0/0:18,0:18:51.17:0,51,906	0/0:29,0:28:87.30:0,87,1595	0/0:21,0:21:60.21:0,60,1090	0/0:14,0:14:42.14:0,42,769	0/0:24,0:24:72.25:0,72,1298	0/0:15,0:15:45.15:0,45,825	0/0:30,0:30:90.30:0,90,1618	0/0:23,0:23:66.21:0,66,1177	0/0:15,0:15:45.15:0,45,811
chr10	84461889	.	GTAT	G	1022.56	PASS	AB=0.556;AC=3;AF=0.054;AN=56;BaseQRankSum=6.711;DP=544;FS=2.593;HRun=0;HaplotypeScore=77.7517;InbreedingCoeff=0.6232;MQ=67.79;MQ0=0;MQRankSum=-0.975;QD=31.96;ReadPosRankSum=1.799;VQSLOD=4.1316;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,2178	0/0:6,0:6:18.06:0,18,377	0/0:10,0:9:21:0,21,400	0/0:8,1:9:14.94:0,15,213	0/0:31,0:31:87.28:0,87,1782	0/0:24,0:24:63.22:0,63,1334	0/0:17,0:17:42.14:0,42,849	0/0:34,0:34:87.27:0,87,1682	0/0:26,0:26:66.23:0,66,1379	0/0:23,0:23:63.21:0,63,1280	0/0:19,0:19:48.16:0,48,1002	0/0:18,0:18:42.13:0,42,820	0/0:15,0:15:42.14:0,42,877	0/0:24,0:24:72.22:0,72,1420	0/0:20,0:20:54.19:0,54,1143	0/0:18,0:18:45.15:0,45,953	0/0:22,0:22:63.18:0,63,1222	0/0:21,0:21:60.17:0,60,1228	0/0:13,0:13:36.11:0,36,706	0/0:23,0:23:60.19:0,60,1200	0/0:21,0:21:39.07:0,39,743	0/0:6,0:6:15.05:0,15,318	0/0:10,0:10:24.07:0,24,470	0/0:15,0:15:36.12:0,36,746	0/0:21,0:21:60.14:0,60,1226	0/1:5,20:25:99:808,0,118	0/0:28,0:28:66.19:0,66,1319	1/1:0,7:7:21.07:319,21,0
chr10	84462074	.	T	TA	1182.48	PASS	AB=0.923;AC=11;AF=0.196;AN=56;BaseQRankSum=-0.659;DP=416;FS=3.002;HRun=6;HaplotypeScore=45.3471;InbreedingCoeff=0.8669;MQ=70.43;MQ0=1;MQRankSum=-6.912;QD=19.71;ReadPosRankSum=1.898;VQSLOD=3.0294;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:65.84:0,66,601	1/1:1,4:5:12.04:151,12,0	0/0:12,0:11:27.04:0,27,266	0/0:8,0:8:18.04:0,18,183	0/0:11,0:11:24.01:0,24,230	0/0:15,0:15:39.06:0,39,386	0/0:18,0:18:45.06:0,45,449	0/0:22,0:22:60.14:0,60,611	0/0:14,0:14:39.08:0,39,396	1/1:3,10:13:30.10:377,30,0	1/1:1,9:10:26.79:257,27,0	0/0:16,0:16:36.08:0,36,367	0/0:8,0:8:21.05:0,21,214	0/0:13,0:13:39.09:0,39,398	0/0:6,0:6:18.04:0,18,182	1/1:0,5:5:15.05:189,15,0	1/1:0,15:15:32.94:373,33,0	0/0:29,0:29:87.17:0,87,878	0/0:24,0:24:72.10:0,72,712	0/0:28,0:28:78.18:0,78,795	0/0:20,0:19:48.09:0,48,483	0/0:10,0:10:26.97:0,27,260	0/0:16,0:16:45.09:0,45,452	0/0:22,0:22:56.94:0,57,545	0/0:14,0:14:36.04:0,36,348	0/1:11,1:11:10.86:11,0,190	0/0:23,0:22:69.15:0,69,703	0/0:3,0:3:9.02:0,9,92
chr10	84465438	.	T	TG	518.40	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=6.628;DP=685;FS=2.860;HRun=6;HaplotypeScore=72.4584;InbreedingCoeff=0.7873;MQ=80.55;MQ0=0;MQRankSum=-3.021;QD=12.96;ReadPosRankSum=-1.102;VQSLOD=2.5096;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.17:0,96,962	0/0:7,0:7:21.05:0,21,214	0/0:33,0:32:77.88:0,78,731	0/0:24,0:25:39.47:0,39,578	0/0:23,0:23:66.15:0,66,670	1/1:2,9:12:23.91:276,24,0	0/0:22,0:22:63.12:0,63,630	0/0:34,0:34:90.19:0,90,911	0/0:35,0:35:99:0,102,1039	0/0:24,0:24:66.14:0,66,669	0/0:12,0:12:36.07:0,36,362	0/0:36,0:36:99:0,99,1001	0/0:25,0:25:66.11:0,66,663	0/0:23,0:23:60.13:0,60,612	0/0:42,0:41:99:0,111,1125	0/0:26,0:26:78.14:0,78,777	0/0:27,0:27:75.11:0,75,747	0/0:14,0:14:36.08:0,36,366	0/0:16,0:16:33:0,33,319	0/0:28,0:28:78.14:0,78,784	0/0:41,0:41:99:0,105,1068	0/0:21,0:21:57.12:0,57,577	0/0:25,0:25:66.09:0,66,655	0/0:32,0:32:90.20:0,90,916	1/1:3,9:12:30.06:357,30,0	0/0:15,0:15:33.28:0,33,181	0/0:25,0:25:63.12:0,63,635	0/1:16,0:16:12.40:12,0,137
chr10	84465773	.	GGTGAACTT	G	2236.83	PASS	AB=0.561;AC=3;AF=0.054;AN=56;BaseQRankSum=8.616;DP=713;FS=0.000;HRun=0;HaplotypeScore=174.5960;InbreedingCoeff=0.6475;MQ=86.35;MQ0=0;MQRankSum=-7.254;QD=65.79;ReadPosRankSum=-0.020;VQSLOD=3.2446;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,4173	0/0:13,0:13:39.13:0,39,1590	0/0:29,0:27:68.72:0,69,2638	0/0:23,0:23:63.16:0,63,2309	0/0:19,0:19:57.20:0,57,2547	0/0:23,0:23:69.22:0,69,2822	0/0:17,0:17:51.18:0,51,2279	0/0:43,0:43:99:0,123,4981	0/0:21,0:21:63.22:0,63,2804	0/0:27,0:27:81.28:0,81,3582	0/0:22,0:22:63.20:0,63,2689	0/0:35,0:35:99:0,102,4384	0/0:26,0:26:78.27:0,78,3469	0/0:30,0:30:90.31:0,90,3943	0/0:30,0:30:90.31:0,90,3641	0/0:31,0:31:93.29:0,93,3754	0/0:19,0:19:54.19:0,54,2380	0/0:16,0:16:42.14:0,42,1687	0/0:22,0:22:66.23:0,66,2725	0/0:32,0:32:90.31:0,90,3759	0/0:26,0:26:78.27:0,78,3448	0/0:22,0:22:63.22:0,63,2805	0/0:26,0:26:78.27:0,78,3402	0/0:28,0:28:84.29:0,84,3623	0/0:22,0:22:66.23:0,66,2877	0/1:5,18:23:99:1396,0,158	0/0:42,0:40:99:0,120,5119	1/1:0,11:11:33.11:947,33,0
chr10	84471445	.	C	CA	976.37	PASS	AB=0.881;AC=13;AF=0.232;AN=56;BaseQRankSum=8.058;DP=547;FS=1.177;HRun=4;HaplotypeScore=86.5625;InbreedingCoeff=0.4491;MQ=65.26;MQ0=6;MQRankSum=-1.854;QD=6.69;ReadPosRankSum=-1.812;VQSLOD=-0.4450;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:43.50:0,43,207	1/1:0,2:2:6.02:67,6,0	0/0:36,0:20:14.29:0,14,320	0/0:34,0:15:22.55:0,23,231	0/0:17,0:16:42.12:0,42,474	0/1:17,2:19:43.24:43,0,162	0/0:16,0:16:42.11:0,42,466	0/0:29,0:29:84.24:0,84,951	0/0:12,0:12:33.09:0,33,374	1/1:4,7:10:5.38:130,5,0	1/1:7,2:7:5.97:53,6,0	0/0:22,0:22:63.18:0,63,714	0/0:15,0:15:45.13:0,45,510	0/0:13,0:12:27.07:0,27,306	0/1:12,0:12:3.57:4,0,62	0/1:5,11:16:27.16:119,0,27	1/1:23,11:33:63.95:698,64,0	0/0:23,0:23:66.17:0,66,732	0/0:26,0:25:75.20:0,75,840	0/0:23,0:23:60.17:0,60,678	0/0:12,0:12:33.09:0,33,374	0/0:15,0:15:42.10:0,42,466	0/0:23,0:22:66.17:0,66,734	0/0:25,0:24:69.16:0,69,768	0/1:19,1:20:15.61:16,0,143	0/1:21,1:22:3.84:4,0,27	0/0:27,0:27:78.21:0,78,874	0/0:7,0:7:8.04:0,8,20
chr10	84471448	.	AAC	A	800.89	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=10.355;DP=537;FS=10.795;HRun=0;HaplotypeScore=90.7613;InbreedingCoeff=0.4588;MQ=65.65;MQ0=5;MQRankSum=1.157;QD=5.13;ReadPosRankSum=-2.367;VQSLOD=1.6070;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:26:64.99:65,0,151	1/1:3,0:3:3.97:23,4,0	0/0:34,0:20:53.98:0,54,585	0/0:33,0:15:21:0,21,341	0/0:18,0:17:48.06:0,48,716	0/1:20,0:20:65.39:65,0,173	0/0:14,0:14:41.96:0,42,617	0/0:30,0:30:87.27:0,87,1345	0/0:11,0:11:33.09:0,33,516	1/1:9,0:8:4.88:97,5,0	1/1:7,0:6:7.80:54,8,0	0/0:22,0:22:63.22:0,63,1061	0/0:15,0:15:45.15:0,45,731	0/0:12,0:11:30.09:0,30,490	0/1:12,0:12:24.13:24,0,82	0/1:16,0:16:27.06:27,0,53	0/1:34,0:32:14.03:184,0,14	0/0:23,0:23:66.02:0,66,1047	0/0:28,0:27:81.22:0,81,1192	0/0:21,0:21:63.12:0,63,940	0/0:11,0:11:33.10:0,33,530	0/0:15,0:15:42.14:0,42,676	0/0:23,0:22:66.14:0,66,1016	0/0:24,0:23:69:0,69,1083	0/0:20,0:20:8.64:0,9,188	1/1:18,3:21:52.87:345,53,0	0/0:27,0:27:78.23:0,78,1244	1/1:6,1:7:13.72:89,14,0
chr10	84471449	.	AC	A	2095.94	PASS	AB=0.977;AC=18;AF=0.321;AN=56;BaseQRankSum=10.905;DP=538;FS=11.740;HRun=1;HaplotypeScore=77.1075;InbreedingCoeff=0.6553;MQ=65.70;MQ0=5;MQRankSum=-1.555;QD=11.98;ReadPosRankSum=-2.973;VQSLOD=0.2759;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,5:26:5.58:315,6,0	1/1:3,0:3:8.73:52,9,0	0/0:34,0:20:51.95:0,52,522	0/0:32,0:15:28.59:0,29,316	0/0:18,0:17:47.97:0,48,567	0/1:18,2:20:7.14:158,0,7	0/0:14,0:14:41.93:0,42,496	0/0:29,0:29:87.26:0,87,1114	0/0:11,0:11:33.09:0,33,421	1/1:9,0:8:20.74:174,21,0	1/1:7,0:6:12.56:76,13,0	0/0:22,0:22:63.20:0,63,824	0/0:17,0:17:51.14:0,51,637	0/0:11,0:10:30.10:0,30,397	0/1:12,0:12:12.55:77,0,13	0/1:16,0:16:18.40:103,0,18	1/1:33,0:31:72.07:424,72,0	0/0:23,0:23:66.09:0,66,829	0/0:29,0:28:84.19:0,84,1035	0/0:21,0:21:63.11:0,63,774	0/0:12,0:12:36.09:0,36,446	0/0:15,0:15:42.13:0,42,548	0/0:24,0:23:69.07:0,69,849	0/0:24,0:23:68.98:0,69,882	0/1:20,0:20:18.91:57,0,19	1/1:5,16:21:58.50:668,58,0	0/0:27,0:27:81.23:0,81,1041	1/1:1,6:7:15.03:188,15,0
chr10	84474205	.	GT	G	1223.53	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.577;DP=628;FS=6.204;HRun=4;HaplotypeScore=62.1730;InbreedingCoeff=0.9994;MQ=76.66;MQ0=0;MQRankSum=-1.535;QD=31.37;ReadPosRankSum=0.282;VQSLOD=3.9508;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,132,1830	0/0:10,0:10:27.09:0,27,378	0/0:21,0:21:63.19:0,63,837	0/0:26,0:26:74.39:0,74,891	0/0:31,0:31:93.26:0,93,1232	0/0:19,0:19:54.18:0,54,755	0/0:18,0:18:48.14:0,48,654	0/0:29,0:29:84.21:0,84,1095	0/0:25,0:25:72.23:0,72,991	0/0:32,0:32:90.28:0,90,1216	0/0:20,0:20:51.14:0,51,666	0/0:20,0:20:60.14:0,60,800	0/0:26,0:26:69.23:0,69,964	0/0:16,0:16:48.16:0,48,672	0/0:26,0:26:78.24:0,78,1073	0/0:15,0:15:45.15:0,45,630	0/0:26,0:26:78.26:0,78,1088	0/0:16,0:16:48.16:0,48,671	0/0:14,0:14:39.13:0,39,543	0/0:24,0:24:66.20:0,66,891	0/0:22,0:22:60.17:0,60,805	0/0:22,0:22:66.20:0,66,892	0/0:14,0:14:39.13:0,39,546	0/0:17,0:17:48.16:0,48,669	0/0:20,0:20:60.20:0,60,838	1/1:1,23:24:69.19:805,69,0	0/0:31,0:31:90.30:0,90,1259	1/1:0,15:15:45.14:540,45,0
chr10	84474460	.	T	TTG	5278.89	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-11.296;DP=627;FS=10.111;HRun=0;HaplotypeScore=74.3709;InbreedingCoeff=0.9975;MQ=84.58;MQ0=0;MQRankSum=-1.286;QD=47.99;ReadPosRankSum=0.335;VQSLOD=5.5561;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:99:0,120,1626	1/1:1,12:13:33.11:605,33,0	0/0:19,0:19:45.15:0,45,635	0/0:19,0:19:53.85:0,54,735	0/0:23,0:23:63.19:0,63,870	0/0:20,0:20:57.19:0,57,817	0/0:30,0:30:90.28:0,90,1255	0/0:29,0:29:77.06:0,77,1050	0/0:18,0:18:54.18:0,54,774	1/1:3,18:21:57.20:1033,57,0	1/1:0,18:18:42.06:726,42,0	0/0:24,0:24:72.24:0,72,1030	0/0:24,0:24:72.24:0,72,1032	0/0:17,0:17:51.15:0,51,695	0/0:28,0:28:81.26:0,81,1144	1/1:0,19:19:54.19:990,54,0	1/1:2,36:39:99:1925,105,0	0/0:20,0:20:51.15:0,51,711	0/0:11,0:11:30.10:0,30,427	0/0:20,0:20:60.19:0,60,843	0/0:30,0:30:90.26:0,90,1236	0/0:24,0:24:66.19:0,66,908	0/0:14,0:14:39.11:0,39,523	0/0:30,0:30:87.28:0,87,1229	0/0:18,0:18:48.16:0,48,686	0/0:26,1:27:17.20:0,17,911	0/0:20,0:20:57.19:0,57,817	0/0:12,0:12:36.11:0,36,498
chr10	84477206	.	C	CGTGTGTGTGT	1824.01	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=9.594;DP=895;FS=26.852;HRun=0;HaplotypeScore=259.2517;InbreedingCoeff=0.0761;MQ=57.80;MQ0=17;MQRankSum=-9.048;QD=9.21;ReadPosRankSum=-1.396;VQSLOD=1.2230;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,20:36:7.85:545,8,0	0/0:6,0:6:11.44:0,11,110	0/0:54,0:31:84.40:0,84,1202	0/0:44,0:23:59.88:0,60,990	0/0:23,0:23:69.13:0,69,1478	0/1:19,0:19:99:135,0,271	0/0:35,0:35:87.14:0,87,1840	0/0:41,0:41:99:0,104,2242	0/0:34,0:35:98.81:0,99,2056	0/1:30,0:29:99:642,0,329	0/0:13,0:12:5.65:0,6,99	0/0:31,0:31:87.24:0,87,2296	0/0:26,0:26:72.23:0,72,2075	0/0:40,0:40:99:0,114,3076	0/1:32,0:32:99:113,0,337	0/1:26,0:26:99:226,0,285	0/1:27,0:26:99:147,0,204	0/0:30,0:30:71.35:0,71,2156	0/0:24,0:24:68.95:0,69,1115	0/0:19,0:19:47.78:0,48,1158	0/0:104,0:104:99:0,289,6690	0/0:19,0:19:57.14:0,57,1217	0/0:20,0:20:56.98:0,57,1457	0/0:49,0:48:99:0,129,3328	0/1:28,0:28:99:152,0,432	0/0:37,0:36:99:0,103,1901	0/0:37,0:36:99:0,105,2521	0/0:9,0:9:18.06:0,18,397
chr10	84477232	.	T	TGTGTGTG	1531.54	PASS	AB=0.946;AC=10;AF=0.179;AN=56;BaseQRankSum=9.630;DP=783;FS=8.169;HRun=0;HaplotypeScore=207.0689;InbreedingCoeff=-0.0473;MQ=65.56;MQ0=13;MQRankSum=-8.277;QD=8.42;ReadPosRankSum=0.244;VQSLOD=1.8352;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:33:99:357,0,335	1/1:3,0:3:2.85:75,3,0	0/0:45,0:17:21.57:0,22,305	0/0:36,0:19:28.55:0,29,484	0/0:20,0:20:57.19:0,57,1133	0/1:14,0:14:56.55:57,0,175	0/0:34,0:34:93.27:0,93,1818	0/0:35,0:35:92.33:0,92,1571	0/0:22,0:22:63.16:0,63,1256	0/1:27,0:27:99:437,0,286	0/0:8,0:7:5.76:0,6,76	0/0:33,0:33:87.28:0,87,1799	0/0:29,0:29:87.24:0,87,1709	0/0:34,0:34:96.07:0,96,2164	0/1:28,0:28:99:384,0,293	0/1:18,0:18:99:150,0,266	0/1:10,11:30:48.91:150,0,49	0/0:26,0:25:66.22:0,66,1498	0/0:29,0:29:73.14:0,73,1240	0/0:14,0:14:36.38:0,36,779	0/0:82,0:82:99:0,214,4902	0/0:16,0:16:47.32:0,47,727	0/0:20,0:20:54.18:0,54,1121	0/0:51,0:51:99:0,126,2643	0/1:17,0:17:53.66:54,0,158	0/0:33,0:32:63.06:0,63,1026	0/0:33,0:33:90.30:0,90,2002	0/1:11,0:11:8.42:8,0,311
chr10	84477872	.	TTTCA	T	4207.24	PASS	AB=0.579;AC=9;AF=0.161;AN=56;BaseQRankSum=11.405;DP=750;FS=0.902;HRun=0;HaplotypeScore=132.0687;InbreedingCoeff=0.8649;MQ=72.07;MQ0=0;MQRankSum=-2.518;QD=34.21;ReadPosRankSum=1.444;VQSLOD=3.3011;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:93.25:0,93,1633	1/1:4,6:10:18.01:254,18,0	0/0:27,0:26:51.17:0,51,1153	0/0:21,0:21:46.69:0,47,956	0/0:29,0:29:81.26:0,81,1914	0/0:26,0:26:63.22:0,63,1558	0/0:18,0:18:51.18:0,51,1230	0/0:29,0:29:72.25:0,72,1703	0/0:28,0:28:75.26:0,75,1868	1/1:3,28:31:84.28:1395,84,0	1/1:5,21:26:54.18:892,54,0	0/0:26,0:26:63.22:0,63,1568	0/0:40,0:40:84.27:0,84,2008	0/0:27,0:27:72.25:0,72,1744	0/0:31,0:31:81.27:0,81,1405	0/1:9,24:33:86.26:903,0,86	1/1:5,18:23:45.15:763,45,0	0/0:34,0:34:93.32:0,93,2270	0/0:24,0:24:57.20:0,57,1400	0/0:28,0:28:72.23:0,72,1698	0/0:24,0:24:60.21:0,60,1485	0/0:30,0:30:78.27:0,78,1943	0/0:22,0:22:60.21:0,60,1436	0/0:21,0:21:48.16:0,48,1196	0/0:29,0:29:78.25:0,78,1850	0/0:28,1:29:24.35:0,24,1691	0/0:33,0:31:84.29:0,84,2021	0/0:14,0:14:36.11:0,36,847
chr10	84478349	.	AT	A	613.02	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.324;DP=628;FS=3.537;HRun=9;HaplotypeScore=59.5628;InbreedingCoeff=0.9207;MQ=70.64;MQ0=0;MQRankSum=0.586;QD=15.72;ReadPosRankSum=1.882;VQSLOD=3.8883;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,117,1306	0/0:12,0:12:33.09:0,33,371	0/0:10,0:10:18.05:0,18,198	0/0:10,0:10:11.32:0,11,163	0/0:25,0:25:63.66:0,64,727	0/0:16,0:16:39.12:0,39,450	0/0:21,0:21:60.17:0,60,683	0/0:25,0:25:63.19:0,63,726	0/0:16,0:16:48.14:0,48,554	0/0:30,0:31:84.07:0,84,941	0/0:20,0:20:51.14:0,51,578	0/0:22,0:22:51.07:0,51,561	0/0:16,0:16:42.12:0,42,485	0/0:10,0:10:30.08:0,30,338	0/0:26,0:26:66.18:0,66,752	0/0:20,0:20:60.17:0,60,682	0/0:34,0:34:96.29:0,96,1108	0/0:17,0:17:42.11:0,42,476	0/0:24,0:24:54.12:0,54,608	0/0:31,0:31:81.22:0,81,918	0/0:26,0:26:72.20:0,72,820	0/0:34,0:34:90.25:0,90,1028	0/0:26,0:27:66.02:0,66,733	0/0:23,0:23:66:0,66,723	0/0:23,0:23:63.14:0,63,702	1/1:7,26:33:46.43:670,46,0	0/0:24,0:24:63.19:0,63,727	1/1:1,5:6:6:55,6,0
chr10	84480330	.	CT	C	473.03	PASS	AB=0.774;AC=13;AF=0.232;AN=56;BaseQRankSum=-0.079;DP=523;FS=1.784;HRun=16;HaplotypeScore=75.1562;InbreedingCoeff=0.5690;MQ=74.03;MQ0=2;MQRankSum=1.031;QD=2.80;ReadPosRankSum=1.520;VQSLOD=-0.3123;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,1:31:17.68:0,18,340	1/1:5,5:12:12.74:65,13,0	0/0:22,0:12:6.53:0,7,47	0/0:21,0:19:6.05:0,6,71	0/0:28,0:29:27.54:0,28,308	0/0:19,0:20:30.96:0,31,129	0/0:10,0:10:8.87:0,9,62	1/1:17,10:27:15.19:93,15,0	0/0:9,2:11:2.83:0,3,111	0/1:15,8:24:55.60:62,0,56	1/1:8,6:14:11.56:72,12,0	0/0:11,0:12:20.77:0,21,156	0/0:15,0:15:27.22:0,27,202	0/0:18,0:18:35.73:0,36,269	1/1:9,0:27:22.67:68,23,0	1/1:4,8:12:20.56:125,21,0	0/1:11,17:31:61.21:158,0,61	0/0:20,0:20:26.85:0,27,316	0/0:18,1:21:12.52:0,13,187	0/0:19,0:19:3.66:0,4,117	0/0:10,0:10:2.72:0,3,117	0/0:6,0:6:8.99:0,9,76	0/0:14,0:14:9.98:0,10,160	0/0:13,0:13:28.16:0,28,217	0/0:26,0:27:35.31:0,35,149	0/0:21,0:22:32.60:0,33,145	0/1:16,1:20:0.19:0,0,200	0/0:13,0:13:8.15:0,8,35
chr10	84480343	.	T	TA	1060.26	PASS	AB=0.606;AC=7;AF=0.125;AN=56;BaseQRankSum=7.022;DP=511;FS=3.656;HRun=0;HaplotypeScore=64.1395;InbreedingCoeff=0.7145;MQ=64.10;MQ0=2;MQRankSum=2.032;QD=13.42;ReadPosRankSum=4.524;VQSLOD=4.5275;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:94.27:0,94,957	0/0:10,0:10:26.73:0,27,188	0/0:24,0:9:6.06:0,6,109	0/0:15,0:11:14.26:0,14,177	0/0:29,0:29:82.74:0,83,844	1/1:5,16:23:4.58:327,5,0	0/0:8,0:8:23:0,23,203	0/0:29,0:28:71.22:0,71,558	0/0:16,0:16:44.93:0,45,393	0/0:29,0:29:73.60:0,74,611	0/0:9,0:9:23.83:0,24,176	0/0:13,0:13:34.25:0,34,342	0/0:17,0:17:48.27:0,48,432	0/0:15,0:15:37.62:0,38,388	0/0:26,0:24:10.39:0,10,211	0/0:12,0:12:26.83:0,27,203	0/0:32,0:32:78.60:0,79,646	0/0:18,0:18:51.07:0,51,566	0/0:21,0:21:56.69:0,57,549	0/0:13,0:13:33.27:0,33,294	0/0:9,0:9:27.03:0,27,305	0/0:6,0:6:18:0,18,199	0/0:13,0:13:39.05:0,39,424	0/0:15,0:15:41.70:0,42,418	1/1:6,17:25:40.11:410,40,0	0/1:7,13:20:42.89:358,0,43	0/0:20,0:20:52.20:0,52,535	1/1:2,8:11:8.20:99,8,0
chr10	84481467	.	GTTTTGTT	G	1637.61	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.308;DP=551;FS=1.625;HRun=0;HaplotypeScore=129.1752;InbreedingCoeff=0.9971;MQ=69.91;MQ0=0;MQRankSum=-7.717;QD=44.26;ReadPosRankSum=0.690;VQSLOD=3.7398;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,117,4312	0/0:11,0:11:24.08:0,24,928	0/0:30,0:26:43.74:0,44,1913	0/0:21,0:19:42.14:0,42,1334	0/0:21,0:21:63.22:0,63,2268	1/1:3,18:20:45.15:1031,45,0	0/0:25,0:25:69.22:0,69,2578	0/0:24,0:24:51.18:0,51,1900	0/0:15,0:15:45.15:0,45,1712	0/0:18,0:18:45.15:0,45,1715	0/0:14,0:14:33.11:0,33,1147	0/0:19,0:19:48.16:0,48,1816	0/0:11,0:11:27.09:0,27,1044	0/0:17,0:17:39.13:0,39,1497	0/0:20,0:20:54.19:0,54,1582	0/0:13,0:13:33.10:0,33,1146	0/0:29,0:29:81.28:0,81,3108	0/0:23,0:22:51.18:0,51,1917	0/0:21,0:21:54.19:0,54,2047	0/0:16,0:16:45.15:0,45,1661	0/0:25,0:25:69.24:0,69,2449	0/0:15,0:15:42.14:0,42,1550	0/0:20,0:20:48.16:0,48,1789	0/0:19,0:19:57.20:0,57,2054	1/1:3,13:16:30.10:728,30,0	0/0:23,0:23:57.20:0,57,2164	0/0:11,0:11:33.11:0,33,1229	0/0:10,0:10:27.09:0,27,1039
chr10	84481628	.	AACC	A	1331.28	PASS	AB=0.529;AC=3;AF=0.054;AN=56;BaseQRankSum=7.080;DP=697;FS=3.675;HRun=0;HaplotypeScore=95.9660;InbreedingCoeff=0.5942;MQ=78.72;MQ0=0;MQRankSum=-1.011;QD=35.98;ReadPosRankSum=1.152;VQSLOD=4.5206;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,3503	0/0:10,0:10:30.10:0,30,739	0/0:22,0:22:63.18:0,63,1402	0/0:22,0:22:66.20:0,66,1446	0/0:38,0:38:99:0,111,2714	0/0:16,0:16:48.16:0,48,1180	0/0:29,0:29:87.30:0,87,2129	0/0:33,0:33:99:0,99,2429	0/0:31,0:31:93.31:0,93,2242	0/0:23,0:23:69.24:0,69,1684	0/0:24,0:24:72.25:0,72,1760	0/0:24,0:24:72.24:0,72,1713	0/0:16,0:16:48.16:0,48,1179	0/0:22,0:22:66.23:0,66,1588	0/0:26,0:26:78.27:0,78,1921	0/0:17,0:17:51.18:0,51,1250	0/0:25,0:25:75.26:0,75,1818	0/0:32,0:32:93.32:0,93,2289	0/0:30,0:30:87.29:0,87,2056	0/0:23,0:23:69.24:0,69,1689	0/0:35,0:35:99:0,105,2585	0/0:28,0:28:84.29:0,84,2046	0/0:14,0:14:42.14:0,42,1020	0/0:25,0:25:75.26:0,75,1833	0/0:21,0:21:60.17:0,60,1377	0/1:3,24:27:99:1261,0,141	0/0:26,0:26:75.26:0,75,1847	1/1:0,10:10:9.03:168,9,0
chr10	84482091	.	T	TAC	570.88	PASS	AB=0.992;AC=22;AF=0.500;AN=44;BaseQRankSum=-0.254;DP=473;FS=0.000;HRun=0;HaplotypeScore=78.6356;InbreedingCoeff=0.3227;MQ=56.34;MQ0=28;MQRankSum=0.650;QD=2.73;ReadPosRankSum=-1.875;VQSLOD=1.6036;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,1:3:3.01:43,3,0	./.	./.	0/0:13,0:13:3:0,3,31	0/1:24,0:24:15.50:24,0,16	1/1:28,0:24:12.46:111,12,0	./.	0/0:15,0:17:16.42:0,16,143	1/1:16,0:14:3.94:31,4,0	1/1:8,0:8:2.99:24,3,0	0/0:13,0:12:6.01:0,6,63	0/0:7,0:7:5.29:0,5,62	0/0:8,0:8:2.99:0,3,23	0/0:17,0:21:11.36:0,11,56	1/1:16,3:18:3.01:44,3,0	0/1:30,1:30:41.30:151,0,41	0/0:11,0:10:3.01:0,3,31	1/1:7,0:7:6.47:62,6,0	1/1:14,0:14:2.77:21,3,0	1/1:16,0:16:6:51,6,0	./.	0/0:9,0:8:3.01:0,3,31	0/0:28,0:28:9.02:0,9,94	0/1:15,0:16:22.44:53,0,22	0/1:14,0:14:0:0,0,0	1/1:13,0:12:9.01:99,9,0	./.
chr10	84482145	.	C	CAG	435.54	PASS	AB=0.953;AC=6;AF=0.107;AN=56;BaseQRankSum=2.564;DP=442;FS=0.737;HRun=0;HaplotypeScore=68.6938;InbreedingCoeff=0.3702;MQ=54.31;MQ0=28;MQRankSum=1.438;QD=4.95;ReadPosRankSum=1.199;VQSLOD=2.3101;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:29.88:0,30,235	0/0:12,0:12:10.39:0,10,198	0/0:10,0:9:11.08:0,11,129	0/0:6,0:5:1.39:0,1,85	0/0:16,0:14:34.95:0,35,270	1/1:22,0:22:46.14:397,46,0	0/0:25,0:22:25.34:0,25,274	0/0:28,0:26:68.75:0,69,585	0/0:15,0:15:35.37:0,35,348	0/0:20,0:18:38.96:0,39,343	0/0:18,0:17:26.93:0,27,215	0/0:17,0:15:26.91:0,27,255	0/0:11,0:11:17.58:0,18,166	0/0:7,0:7:11.98:0,12,100	0/0:17,0:14:29.16:0,29,232	0/0:13,0:12:0.20:0,0,108	0/1:27,0:27:33.50:34,0,355	0/0:13,0:11:26.97:0,27,240	0/0:17,0:14:13.77:0,14,236	0/0:14,0:13:20.91:0,21,165	0/0:13,0:12:12.10:0,12,116	0/0:10,0:8:20.97:0,21,173	0/0:8,0:6:17.99:0,18,166	0/0:18,0:18:47.31:0,47,423	1/1:7,12:21:1.59:103,2,0	0/0:20,0:19:50.56:0,51,408	0/1:15,0:15:25.52:26,0,182	0/0:5,0:3:5.97:0,6,45
chr10	84482342	.	T	TA	1056	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.500;DP=453;FS=1.412;HRun=8;HaplotypeScore=47.7080;InbreedingCoeff=0.8799;MQ=67.42;MQ0=1;MQRankSum=0.313;QD=24.00;ReadPosRankSum=0.198;VQSLOD=4.0035;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.04:0,87,792	0/0:5,0:5:15.01:0,15,137	0/0:15,0:10:13.12:0,13,117	0/0:12,0:10:23.96:0,24,203	0/0:20,0:20:57.02:0,57,518	1/1:2,18:20:51.15:589,51,0	0/0:9,0:9:18:0,18,165	0/0:37,0:37:89.85:0,90,806	0/0:11,0:11:30.01:0,30,275	0/0:23,0:23:63.03:0,63,574	0/0:15,0:15:42.01:0,42,380	0/0:8,0:8:18:0,18,165	0/0:18,0:18:54:0,54,487	0/0:19,0:19:57.03:0,57,521	0/0:16,0:16:36.01:0,36,326	0/0:10,0:10:30.02:0,30,275	0/0:22,0:21:59.93:0,60,549	0/0:22,0:22:41.99:0,42,378	0/0:17,0:17:42:0,42,379	0/0:17,0:17:47.98:0,48,427	0/0:12,0:12:33:0,33,296	0/0:7,0:6:18.01:0,18,165	0/0:6,0:6:15.01:0,15,137	0/0:1,0:1:3:0,3,27	1/1:3,21:24:51.15:589,51,0	0/0:27,0:27:74.94:0,75,669	0/0:21,0:21:59.98:0,60,533	0/0:10,0:10:27.01:0,27,247
chr10	84484517	.	T	TA	444.68	PASS	AB=0.929;AC=4;AF=0.071;AN=56;BaseQRankSum=-1.974;DP=332;FS=20.438;HRun=9;HaplotypeScore=36.8710;InbreedingCoeff=0.4188;MQ=84.49;MQ0=0;MQRankSum=-0.745;QD=11.12;ReadPosRankSum=-0.785;VQSLOD=0.6121;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:48.60:532,49,0	0/0:5,0:5:15:0,15,130	0/0:13,0:15:17.28:0,17,171	0/0:13,0:13:21.35:0,21,168	0/1:5,1:6:15.17:15,0,112	0/0:15,0:15:35.97:0,36,307	0/0:12,0:12:29.98:0,30,260	0/0:13,0:13:26.98:0,27,234	0/0:7,0:7:20.99:0,21,180	0/0:16,0:16:44.95:0,45,383	0/0:8,0:8:20.99:0,21,182	0/0:8,0:8:24:0,24,208	0/0:9,0:9:20.98:0,21,179	0/0:6,0:6:18:0,18,156	0/0:3,0:3:3:0,3,26	0/0:10,0:10:20.86:0,21,182	0/0:32,0:32:89.92:0,90,773	0/0:25,0:25:65.93:0,66,568	0/0:19,0:19:41.92:0,42,351	0/0:5,0:6:14:0,14,110	0/0:13,0:13:29.98:0,30,260	0/0:8,0:8:20.97:0,21,177	0/0:6,0:6:17.95:0,18,149	0/1:12,0:12:6.95:7,0,151	0/0:8,0:8:23.98:0,24,204	0/0:12,0:12:32.98:0,33,286	0/0:11,0:11:25.54:0,26,229	0/0:12,0:12:35.99:0,36,312
chr10	84485554	.	T	TAC	4281.16	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.020;DP=706;FS=3.333;HRun=0;HaplotypeScore=100.6423;InbreedingCoeff=0.9466;MQ=67.87;MQ0=2;MQRankSum=-1.455;QD=34.81;ReadPosRankSum=-0.799;VQSLOD=6.9332;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,35:39:84.29:1396,84,0	0/0:7,0:7:18.06:0,18,227	0/0:25,0:14:12.05:0,12,224	0/0:30,0:18:4.63:0,5,170	0/0:19,0:19:51.16:0,51,644	1/1:9,18:27:63.17:969,63,0	0/0:41,0:41:84.24:0,84,1034	0/0:25,0:25:48.13:0,48,581	0/0:24,0:24:51.15:0,51,630	0/0:24,0:24:66.19:0,66,811	0/0:12,0:12:36.12:0,36,454	0/0:33,0:33:84.27:0,84,1059	0/0:26,0:26:63.15:0,63,763	0/0:29,0:29:78.21:0,78,965	1/1:1,22:23:51.17:848,51,0	0/0:20,0:20:51.16:0,51,643	0/0:28,0:28:66.20:0,66,819	0/0:30,0:31:75.05:0,75,908	0/0:19,0:19:42.13:0,42,524	0/0:19,0:19:44.97:0,45,544	0/0:61,1:63:99:0,153,1890	0/0:28,0:29:72.06:0,72,884	0/0:16,0:16:33.09:0,33,399	0/0:42,0:42:99:0,102,1266	1/1:7,7:14:21.07:344,21,0	1/1:4,13:17:42.09:623,42,0	0/0:20,0:20:57.18:0,57,719	1/1:3,0:3:6.91:102,7,0
chr10	84485595	.	A	ACG	1493.21	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=1.052;DP=877;FS=4.185;HRun=0;HaplotypeScore=124.4649;InbreedingCoeff=0.4875;MQ=57.89;MQ0=14;MQRankSum=-2.883;QD=15.08;ReadPosRankSum=-1.660;VQSLOD=3.3184;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:3.73:0,4,374	0/0:11,0:11:33.04:0,33,435	0/0:58,0:19:17.15:0,17,348	0/0:71,0:21:44.38:0,44,538	0/0:23,0:23:66.15:0,66,900	1/1:2,16:18:42.14:791,42,0	0/0:27,0:27:78.19:0,78,1082	0/0:27,0:27:69.20:0,69,980	0/0:22,0:22:63.14:0,63,855	0/0:30,0:30:84.16:0,84,1106	0/0:28,0:28:78.18:0,78,1081	0/0:31,0:31:93.20:0,93,1268	0/0:23,0:23:69.21:0,69,1010	0/0:36,0:36:99:0,108,1504	0/1:33,0:33:61.14:61,0,269	0/0:28,0:28:81.22:0,81,1149	0/0:39,0:39:97.02:0,97,1282	0/0:32,0:32:87.11:0,87,1250	0/0:27,0:27:72.17:0,72,971	0/0:25,0:25:69.14:0,69,943	0/0:69,0:68:99:0,189,2511	0/0:32,0:32:96.27:0,96,1399	0/0:20,0:20:60.14:0,60,817	0/0:46,0:46:99:0,129,1728	1/1:3,19:23:39.13:742,39,0	0/1:21,0:21:29.89:30,0,209	0/0:32,0:31:93.23:0,93,1290	0/1:4,0:4:10.16:10,0,28
chr10	84485990	.	TATAAATGA	T	1182.56	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.456;DP=681;FS=0.000;HRun=0;HaplotypeScore=184.9843;InbreedingCoeff=0.8747;MQ=63.94;MQ0=0;MQRankSum=-5.484;QD=34.78;ReadPosRankSum=1.653;VQSLOD=3.3175;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.05:0,78,2180	0/0:5,0:5:15.03:0,15,160	0/0:18,0:14:9.14:0,9,180	0/0:11,0:7:8.18:0,8,111	0/0:40,0:40:99:0,117,3444	0/0:22,0:22:65.93:0,66,1547	0/0:18,0:18:50.40:0,50,969	0/0:37,0:37:99:0,108,1544	0/0:15,0:15:45.10:0,45,1272	0/0:33,0:33:93.22:0,93,1070	0/0:27,0:27:78.12:0,78,860	0/0:38,0:38:99:0,105,3510	0/0:25,0:25:75.13:0,75,2137	0/0:20,0:20:60.10:0,60,1544	1/1:0,34:34:45.15:1277,45,0	0/0:27,0:27:72.17:0,72,857	0/0:30,0:30:77.98:0,78,837	0/0:16,0:16:45.14:0,45,1750	0/0:15,0:14:39.06:0,39,758	0/0:32,0:32:93.17:0,93,2252	0/0:25,0:25:63.11:0,63,1430	0/0:19,0:19:57.06:0,57,1605	0/0:19,0:19:57.11:0,57,1437	0/0:26,0:26:72.08:0,72,2251	0/0:20,0:20:57.08:0,57,1959	0/0:30,0:30:87.03:0,87,973	0/0:39,0:39:90.21:0,90,2546	0/0:10,0:10:27.07:0,27,301
chr10	84485993	.	AAATG	A	4510.73	PASS	AB=0.958;AC=17;AF=0.327;AN=52;BaseQRankSum=7.283;DP=681;FS=22.342;HRun=0;HaplotypeScore=119.1954;InbreedingCoeff=0.8894;MQ=62.84;MQ0=0;MQRankSum=-1.018;QD=21.08;ReadPosRankSum=2.081;VQSLOD=3.1487;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:48.10:0,48,1027	1/1:2,3:5:9.03:140,9,0	./.	./.	0/0:38,0:38:69.23:0,69,1573	0/1:22,1:23:10.65:11,0,641	0/0:18,0:18:18.06:0,18,404	0/0:40,0:40:30.07:0,30,445	0/0:16,0:16:6.12:0,6,611	1/1:10,21:31:63.20:960,63,0	1/1:6,19:25:51.17:794,51,0	0/0:35,0:35:75.23:0,75,1633	0/0:25,0:25:48.15:0,48,1042	0/0:20,0:20:30.09:0,30,657	1/1:34,0:34:45.05:419,45,0	1/1:8,19:27:48.16:747,48,0	1/1:13,17:30:22.16:587,22,0	0/0:15,0:15:39.12:0,39,873	0/0:10,0:16:24.08:0,24,432	0/0:13,0:35:75.23:0,75,1193	0/0:12,0:23:30.09:0,30,515	0/0:19,0:19:30.10:0,30,705	0/0:22,0:22:36.11:0,36,797	0/0:25,0:25:48.16:0,48,1130	0/0:22,0:22:51.16:0,51,1046	1/1:15,14:29:39.05:526,39,0	0/0:13,0:40:60.20:0,60,1015	1/1:2,8:10:21.07:327,21,0
chr10	84486105	.	GGTTTGTTTGTTT	G	6153.33	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.153;DP=737;FS=3.016;HRun=0;HaplotypeScore=251.3843;InbreedingCoeff=0.9805;MQ=70.46;MQ0=3;MQRankSum=-10.043;QD=43.03;ReadPosRankSum=1.878;VQSLOD=4.2963;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,18:31:26.20:859,26,0	0/0:9,0:17:28.65:0,29,1236	0/0:31,0:24:9.03:0,9,306	0/0:24,0:23:24.08:0,24,924	0/0:23,0:23:42.14:0,42,2247	1/1:7,16:23:42.14:1411,42,0	0/0:29,0:29:54.19:0,54,2877	0/0:32,0:31:51.17:0,51,1970	0/0:28,0:28:57.20:0,57,3040	0/0:28,0:33:69.24:0,69,3172	0/0:7,0:17:36.12:0,36,1678	0/0:34,0:35:81.28:0,81,4291	0/0:25,0:25:60.21:0,60,3114	0/0:31,0:31:78.27:0,78,4061	1/1:7,14:21:36.12:1228,36,0	0/0:8,0:26:60.21:0,60,2971	0/0:18,0:32:48.16:0,48,2071	0/0:24,0:24:42.11:0,42,2081	0/0:26,0:24:33.11:0,33,1298	0/0:30,0:30:66.23:0,66,3279	0/0:35,0:35:75.26:0,75,4384	0/0:25,0:26:45.15:0,45,2336	0/0:13,0:13:27.09:0,27,1499	0/0:38,0:38:78.27:0,78,4373	1/1:11,9:20:24.08:771,24,0	1/1:18,18:36:51.15:1468,51,0	0/0:19,0:19:54.19:0,54,3033	1/1:8,4:12:12.04:416,12,0
chr10	84487947	.	CTTTT	C	2191.37	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=5.763;DP=470;FS=2.341;HRun=18;HaplotypeScore=102.7738;InbreedingCoeff=0.9428;MQ=67.15;MQ0=14;MQRankSum=-6.993;QD=14.42;ReadPosRankSum=4.946;VQSLOD=0.2186;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,8:18:20.54:240,21,0	0/0:7,0:6:10.92:0,11,139	0/0:26,0:16:11.56:0,12,205	0/0:17,0:11:15.51:0,16,124	0/0:21,0:19:24.08:0,24,503	0/0:18,0:17:34.70:0,35,541	1/1:3,13:18:32.84:374,33,0	1/1:11,8:19:23.20:278,23,0	0/0:8,0:8:18.06:0,18,330	0/0:21,0:22:43.77:0,44,538	0/0:12,0:13:19.10:0,19,341	0/0:11,0:13:26.99:0,27,441	0/0:17,0:19:36.12:0,36,654	0/0:10,0:9:21.07:0,21,378	1/1:7,0:13:15.83:118,16,0	0/0:3,0:3:3.01:0,3,64	0/0:16,0:18:25.75:0,26,377	0/0:15,0:18:39.03:0,39,602	1/1:10,6:17:20.28:198,20,0	1/1:8,9:22:42.74:445,43,0	1/1:5,4:9:11.81:146,12,0	0/0:8,0:10:23.98:0,24,362	0/0:14,0:15:29.22:0,29,444	0/0:13,0:12:27.06:0,27,462	0/0:15,0:14:29.42:0,29,451	0/0:21,0:24:54.11:0,54,942	1/1:14,16:30:48.07:596,48,0	0/0:22,0:22:52.17:0,52,940
chr10	84487970	.	CT	C	205.42	PASS	AB=0.767;AC=4;AF=0.074;AN=54;BaseQRankSum=0.508;DP=438;FS=1.094;HRun=9;HaplotypeScore=80.5555;InbreedingCoeff=0.4292;MQ=40.15;MQ0=36;MQRankSum=0.964;QD=4.37;ReadPosRankSum=-1.111;VQSLOD=0.4039;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:42.12:0,42,484	0/0:5,0:4:3.01:0,3,32	./.	0/0:5,0:3:0:0,0,0	0/0:19,0:16:15.02:0,15,154	0/1:8,12:19:6.32:190,0,6	0/0:19,0:18:36.06:0,36,398	0/0:21,0:19:33.04:0,33,352	0/0:9,0:8:14.98:0,15,146	0/0:18,0:17:19:0,19,210	0/0:11,0:10:9.03:0,9,104	0/0:19,0:17:36.42:0,36,375	0/0:16,0:14:21.49:0,21,197	0/0:10,0:7:9.01:0,9,93	0/0:19,0:17:26.99:0,27,281	0/0:5,0:5:12:0,12,125	0/0:11,0:11:30.05:0,30,331	0/0:23,0:20:44.95:0,45,443	0/0:14,0:14:27.01:0,27,294	0/0:21,0:20:32.87:0,33,318	0/1:9,1:9:15.41:15,0,92	0/0:13,0:13:18.05:0,18,208	0/0:13,0:12:17.73:0,18,154	0/0:17,0:14:15.01:0,15,152	1/1:12,5:14:10.74:107,11,0	0/0:18,0:16:36.06:0,36,396	0/0:29,0:27:34.92:0,35,306	0/0:30,0:26:41.81:0,42,359
chr10	84488979	.	GAGT	G	4265.99	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.749;DP=493;FS=18.987;HRun=0;HaplotypeScore=82.4016;InbreedingCoeff=0.9592;MQ=90.58;MQ0=0;MQRankSum=-5.941;QD=33.07;ReadPosRankSum=-0.226;VQSLOD=3.7660;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.27:0,78,1681	0/0:3,0:3:6.02:0,6,132	0/0:23,0:23:60.21:0,60,1286	0/0:19,0:19:45.09:0,45,887	0/0:11,0:11:24.08:0,24,522	0/0:17,0:17:45.15:0,45,985	1/1:4,18:22:51.17:819,51,0	1/1:3,15:18:45.14:699,45,0	0/0:20,0:20:51.17:0,51,1123	0/0:10,0:10:24.08:0,24,488	0/0:10,0:10:27.08:0,27,596	0/0:23,0:23:63.19:0,63,1299	0/0:22,0:22:63.22:0,63,1390	0/0:15,0:15:45.15:0,45,993	0/0:21,0:21:60.18:0,60,1242	0/0:17,0:17:51.16:0,51,1084	0/0:37,0:37:99:0,105,2290	0/0:31,0:31:93.30:0,93,1984	1/1:4,8:12:24.06:360,24,0	1/1:2,8:10:15.05:230,15,0	1/1:3,32:35:54.07:856,54,0	0/0:11,0:11:30.07:0,30,660	0/0:9,0:9:18.06:0,18,397	0/0:28,0:28:81.28:0,81,1788	0/0:10,0:10:24.07:0,24,489	1/1:3,9:12:27.09:434,27,0	1/1:3,14:17:48.16:771,48,0	1/1:1,2:3:6.02:96,6,0
chr10	84489401	.	CG	C	12449.37	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=14.449;DP=713;FS=4.573;HRun=3;HaplotypeScore=69.5687;InbreedingCoeff=0.9935;MQ=86.09;MQ0=0;MQRankSum=-3.474;QD=32.76;ReadPosRankSum=2.316;VQSLOD=5.4443;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,2072	1/1:0,6:6:12.04:149,12,0	0/0:24,0:24:64.42:0,64,860	0/0:25,0:25:69.05:0,69,920	0/0:24,0:24:66.21:0,66,928	1/1:0,19:19:48.15:595,48,0	1/1:0,39:39:99:1338,108,0	1/1:2,24:26:69.20:841,69,0	0/0:29,0:29:87.26:0,87,1212	1/1:0,19:19:57.17:695,57,0	1/1:0,17:17:48.15:595,48,0	0/0:38,0:38:99:0,114,1636	0/0:18,0:18:51.17:0,51,734	0/0:28,0:28:84.24:0,84,1148	1/1:1,25:26:72.23:891,72,0	1/1:0,17:17:45.14:558,45,0	1/1:1,34:35:87.27:1078,87,0	0/0:36,0:36:99:0,102,1442	1/1:2,24:26:72.17:852,72,0	1/1:0,21:21:60.12:723,60,0	1/1:0,32:32:84.26:1041,84,0	0/0:18,0:18:54.18:0,54,776	0/0:15,0:15:45.07:0,45,620	0/0:29,0:29:84.26:0,84,1170	1/1:0,25:25:57.18:706,57,0	1/1:2,36:38:99:1273,105,0	1/1:0,28:28:75.24:929,75,0	1/1:0,6:6:15.05:186,15,0
chr10	84490048	.	C	CACAT	4836.38	PASS	AB=0.931;AC=11;AF=0.196;AN=56;BaseQRankSum=8.449;DP=688;FS=1.003;HRun=0;HaplotypeScore=114.7299;InbreedingCoeff=0.8554;MQ=86.73;MQ0=0;MQRankSum=-3.837;QD=39.00;ReadPosRankSum=3.047;VQSLOD=5.2074;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,120,2125	1/1:2,3:5:6.02:157,6,0	0/0:21,0:21:47.34:0,47,911	0/0:27,0:27:63.17:0,63,1057	0/0:18,0:18:54.17:0,54,950	0/0:16,0:16:45.15:0,45,818	0/0:31,0:31:84.25:0,84,1441	0/0:26,0:26:63.19:0,63,1064	0/0:22,0:22:66.21:0,66,1169	1/1:4,16:21:54.16:1303,54,0	1/1:5,11:17:24.08:627,24,0	0/0:35,0:35:93.27:0,93,1601	0/0:24,0:24:57.18:0,57,1006	0/0:21,0:21:54.19:0,54,974	0/0:27,0:27:81.26:0,81,1408	1/1:1,16:19:45.15:1176,45,0	1/1:4,30:35:57.20:1492,57,0	0/0:39,0:39:96.27:0,96,1666	0/0:21,0:21:36.96:0,37,798	0/0:12,0:12:36.12:0,36,654	0/0:65,0:65:99:0,174,2915	0/0:15,0:15:27.09:0,27,485	0/0:19,0:19:42.11:0,42,682	0/0:42,0:42:99:0,114,2065	0/0:11,0:11:33.11:0,33,600	0/1:25,2:27:81.74:82,0,1142	0/0:22,0:22:66.23:0,66,1192	0/0:4,0:4:12.04:0,12,218
chr10	84490254	.	G	GA	13100.05	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-3.507;DP=562;FS=1.827;HRun=0;HaplotypeScore=63.2412;InbreedingCoeff=0.9434;MQ=73.92;MQ0=1;MQRankSum=-0.935;QD=40.31;ReadPosRankSum=1.657;VQSLOD=5.5354;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,1677	1/1:0,8:8:18.06:282,18,0	0/0:19,0:19:47.70:0,48,549	0/1:12,0:12:4.85:5,0,231	0/0:23,0:23:69.23:0,69,963	1/1:0,17:17:51.17:797,51,0	1/1:0,19:19:39.13:610,39,0	1/1:0,26:26:78.25:1197,78,0	0/0:22,0:22:66.21:0,66,901	1/1:1,18:19:48.14:709,48,0	1/1:0,18:18:42.14:657,42,0	0/0:15,0:15:45.14:0,45,610	0/0:11,0:11:33.11:0,33,461	0/0:18,0:18:54.18:0,54,754	1/1:0,16:16:48.16:751,48,0	1/1:0,12:12:33.11:516,33,0	1/1:1,32:33:84.29:1314,84,0	0/0:18,0:18:54.18:0,54,755	1/1:0,19:19:57.18:871,57,0	1/1:0,19:19:51.17:797,51,0	1/1:0,22:22:57.19:892,57,0	0/0:13,0:13:36.12:0,36,503	0/0:22,0:22:66.22:0,66,922	0/0:33,0:32:96.23:0,96,1241	1/1:0,24:24:69.23:1079,69,0	1/1:0,23:23:66.17:981,66,0	1/1:0,24:24:66.22:1032,66,0	1/1:0,14:14:39.13:610,39,0
chr10	84490489	.	TC	T	451.36	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.495;DP=618;FS=5.058;HRun=4;HaplotypeScore=62.2135;InbreedingCoeff=0.9975;MQ=56.34;MQ0=1;MQRankSum=3.249;QD=15.56;ReadPosRankSum=-0.318;VQSLOD=2.7327;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,14:29:48.10:546,48,0	0/0:10,0:10:30.09:0,30,404	0/0:19,0:12:27.06:0,27,351	0/0:19,0:12:33.09:0,33,429	0/0:19,0:19:51.09:0,51,600	0/0:26,0:26:75.23:0,75,1018	0/0:23,0:23:63.20:0,63,866	0/0:34,0:34:90.26:0,90,1177	0/0:21,0:21:63.11:0,63,841	0/0:24,0:24:69.19:0,69,890	0/0:17,0:16:36.04:0,36,404	0/0:24,0:24:69.20:0,69,916	0/0:28,0:28:81.26:0,81,1118	0/0:23,0:23:63.17:0,63,820	0/0:17,0:17:51.17:0,51,714	0/0:19,0:19:54.13:0,54,719	0/0:25,0:25:75.25:0,75,1050	0/0:22,0:22:66.22:0,66,920	0/0:24,0:24:69.14:0,69,867	0/0:22,0:22:63.07:0,63,754	0/0:34,0:34:96.23:0,96,1241	0/0:20,0:20:48.05:0,48,581	0/0:13,0:13:30.04:0,30,351	0/0:16,0:16:45.15:0,45,629	0/0:25,0:25:66.03:0,66,736	0/0:26,0:26:63.02:0,63,721	0/0:24,0:24:69.20:0,69,931	0/0:15,0:15:42.14:0,42,588
chr10	84490584	.	A	AC	615.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.927;DP=750;FS=4.700;HRun=5;HaplotypeScore=72.9131;InbreedingCoeff=0.9996;MQ=73.29;MQ0=0;MQRankSum=-2.385;QD=23.67;ReadPosRankSum=-0.698;VQSLOD=2.3509;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:26:54.18:710,54,0	0/0:16,0:16:39.09:0,39,419	0/0:28,0:27:58.57:0,59,584	0/0:25,0:23:54.13:0,54,573	0/0:39,0:39:99:0,111,1184	0/0:29,0:29:84.18:0,84,886	0/0:27,0:27:75.17:0,75,797	0/0:32,0:31:78.16:0,78,813	0/0:21,0:21:54.11:0,54,571	0/0:40,0:40:99:0,117,1258	0/0:23,0:23:63.15:0,63,671	0/0:18,0:18:45.11:0,45,483	0/0:36,0:36:99:0,102,1079	0/0:31,0:31:87.22:0,87,935	0/0:30,0:30:90.23:0,90,967	0/0:26,0:26:69.17:0,69,741	0/0:22,0:22:66.13:0,66,691	0/0:21,0:21:63.12:0,63,664	0/0:20,0:20:51.12:0,51,542	0/0:27,0:27:69.14:0,69,725	0/0:38,0:38:99:0,111,1174	0/0:24,0:24:69.17:0,69,741	0/0:29,0:29:81.17:0,81,854	0/0:24,0:24:69.17:0,69,741	0/0:16,0:16:42.09:0,42,443	0/0:31,0:31:87.22:0,87,935	0/0:40,0:40:99:0,117,1257	0/0:11,0:11:33.08:0,33,355
chr10	84490946	.	CT	C	955.77	PASS	AB=0.756;AC=8;AF=0.143;AN=56;BaseQRankSum=-1.655;DP=534;FS=14.875;HRun=11;HaplotypeScore=76.0283;InbreedingCoeff=0.6614;MQ=63.75;MQ0=15;MQRankSum=-0.295;QD=11.80;ReadPosRankSum=1.428;VQSLOD=1.6529;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:28:36.55:0,37,208	0/0:2,0:7:14.34:0,14,77	0/1:12,2:11:34.32:34,0,56	0/0:16,0:12:4.08:0,4,96	0/0:21,0:22:53.92:0,54,540	1/1:3,15:18:38.95:320,39,0	0/0:9,0:24:46.07:0,46,275	0/0:13,0:31:53.66:0,54,342	0/0:13,0:12:25.98:0,26,238	0/0:12,0:26:26.91:0,27,202	0/0:6,0:17:25.98:0,26,150	0/0:11,1:12:2.42:0,2,231	0/0:19,0:20:38.92:0,39,390	0/0:12,0:11:27.07:0,27,288	0/0:24,1:25:35.21:0,35,522	0/0:2,0:8:14.11:0,14,69	0/0:6,0:21:37.01:0,37,189	0/0:26,0:24:62.81:0,63,641	0/0:3,0:22:51.06:0,51,270	0/0:5,0:20:42.80:0,43,231	0/0:4,0:17:31.35:0,31,161	0/0:15,0:15:36.08:0,36,376	0/0:13,0:13:30.04:0,30,308	0/0:31,0:29:47.57:0,48,682	1/1:3,12:15:23.96:197,24,0	0/1:4,8:14:6.16:144,0,6	0/0:5,0:18:40.58:0,41,219	1/1:2,17:19:52.82:413,53,0
chr10	84491261	.	TTG	T	528.18	PASS	AB=0.926;AC=6;AF=0.107;AN=56;BaseQRankSum=3.718;DP=483;FS=5.983;HRun=0;HaplotypeScore=101.1509;InbreedingCoeff=-0.0240;MQ=66.41;MQ0=3;MQRankSum=-1.414;QD=5.74;ReadPosRankSum=-5.700;VQSLOD=0.4885;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:70.75:154,0,71	0/1:6,0:6:3.37:79,0,3	0/0:23,0:14:9.70:0,10,254	0/0:20,0:14:30.92:0,31,488	0/0:20,0:20:60.20:0,60,916	0/0:9,0:9:17.89:0,18,132	0/0:9,0:8:11.87:0,12,80	0/0:31,0:31:19.55:0,20,557	0/0:19,0:18:54.17:0,54,795	0/1:11,7:17:51.77:259,0,52	0/1:14,1:14:61.34:67,0,61	0/0:8,0:8:24.08:0,24,357	0/0:12,0:12:36.03:0,36,502	0/0:9,0:9:27.08:0,27,398	0/0:15,0:15:41.80:0,42,333	0/1:8,1:8:58.82:62,0,59	0/1:17,0:16:31.48:31,0,36	0/0:25,0:25:71.15:0,71,997	0/0:18,0:18:45.26:0,45,442	0/0:18,0:18:48.13:0,48,354	0/0:6,0:6:11.88:0,12,82	0/0:12,0:12:36.09:0,36,499	0/0:21,0:21:60.15:0,60,895	0/0:17,0:17:50.97:0,51,636	0/0:24,0:24:70.86:0,71,616	0/0:32,0:32:63.86:0,64,509	0/0:21,0:21:45.63:0,46,320	0/0:22,0:22:53.35:0,53,360
chr10	84491263	.	G	GTTTT	9452.80	PASS	AB=0.875;AC=34;AF=0.607;AN=56;BaseQRankSum=0.012;DP=484;FS=7.344;HRun=8;HaplotypeScore=92.2638;InbreedingCoeff=0.7889;MQ=65.52;MQ0=3;MQRankSum=-2.218;QD=29.09;ReadPosRankSum=-3.744;VQSLOD=1.7583;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:28:33.30:530,33,0	1/1:3,0:6:0.67:83,1,0	0/1:23,0:14:11.95:12,0,118	0/0:20,0:14:27.88:0,28,479	0/0:20,0:20:57.17:0,57,846	1/1:1,0:8:12.04:150,12,0	1/1:1,9:10:12.04:294,12,0	1/1:4,28:32:77.89:1085,78,0	0/0:18,0:17:48.15:0,48,720	1/1:9,0:18:41.42:400,41,0	1/1:8,0:14:7.38:180,7,0	0/0:8,0:8:21.06:0,21,318	0/0:12,0:12:33.11:0,33,486	0/0:9,0:9:24.07:0,24,361	1/1:3,0:15:27.23:168,27,0	0/1:6,0:8:27.34:195,0,27	1/1:3,0:15:9.02:103,9,0	0/0:23,0:23:65.07:0,65,943	1/1:9,7:19:33.90:466,34,0	1/1:1,14:18:51.09:1041,51,0	1/1:0,5:6:12.04:257,12,0	0/0:12,0:12:33.08:0,33,466	0/0:21,0:21:60.17:0,60,868	0/0:16,0:16:36.03:0,36,477	1/1:9,0:24:55.44:623,55,0	1/1:1,27:32:94.53:1855,95,0	1/1:5,12:23:36.12:774,36,0	1/1:0,20:22:51.18:1235,51,0
chr10	84491269	.	T	TTTTTG	4587.32	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=12.844;DP=476;FS=14.944;HRun=0;HaplotypeScore=115.8101;InbreedingCoeff=0.2481;MQ=62.55;MQ0=3;MQRankSum=-5.675;QD=15.60;ReadPosRankSum=1.950;VQSLOD=3.6329;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,9:26:42.27:1050,42,0	1/1:4,0:4:1.80:55,2,0	0/0:21,0:13:0.66:0,1,217	0/0:20,0:13:34.93:0,35,625	0/0:20,0:20:57.18:0,57,1065	0/1:10,0:10:31.57:57,0,32	0/1:10,0:9:10.64:114,0,11	0/1:29,0:28:12.38:242,0,12	0/0:18,0:17:48.16:0,48,890	0/1:19,0:19:15.56:125,0,16	0/1:15,0:14:48.90:49,0,57	0/0:9,0:9:24.07:0,24,440	0/0:13,0:13:39.11:0,39,661	0/0:10,0:10:27.08:0,27,471	0/1:14,0:14:18.68:67,0,19	0/1:8,0:7:41.04:111,0,41	0/1:19,0:18:22.55:23,0,58	0/0:26,0:26:71.73:0,72,1205	1/1:13,0:13:14.60:154,15,0	1/1:19,0:19:18.09:470,18,0	0/1:6,0:6:9.67:109,0,10	0/0:11,0:11:33.11:0,33,612	0/0:20,0:20:60.20:0,60,1110	0/0:13,0:13:36.07:0,36,573	1/1:24,0:24:17.20:287,17,0	1/1:33,0:33:26.96:725,27,0	0/1:23,0:23:3.88:371,0,4	1/1:22,0:22:51.13:577,51,0
chr10	84491632	.	TG	T	5248.40	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=0.423;DP=640;FS=1.926;HRun=9;HaplotypeScore=83.8969;InbreedingCoeff=0.9882;MQ=74.10;MQ0=0;MQRankSum=-0.366;QD=20.66;ReadPosRankSum=0.911;VQSLOD=5.4373;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:63.48:0,63,695	0/0:2,0:7:7.97:0,8,42	0/0:25,0:17:43.50:0,44,368	0/0:19,0:14:24.50:0,24,178	0/0:25,0:25:54.14:0,54,603	1/1:3,13:16:36.02:329,36,0	1/1:4,19:23:57.03:521,57,0	1/1:5,13:18:35.91:310,36,0	0/0:30,0:30:81.21:0,81,910	0/0:11,0:31:63.29:0,63,374	0/0:6,0:21:26.07:0,26,154	0/0:29,0:29:63.07:0,63,697	0/0:18,0:18:54.13:0,54,601	0/0:22,0:22:51.13:0,51,569	1/1:2,25:27:72.04:658,72,0	0/0:5,0:17:31.51:0,32,184	0/0:8,0:30:51.34:0,51,279	0/0:25,0:25:60.13:0,60,659	1/1:2,24:26:71.38:631,71,0	1/1:5,22:27:59.83:520,60,0	1/1:13,26:39:61.42:805,61,0	0/0:14,0:14:39.08:0,39,419	0/0:18,0:18:39.08:0,39,428	0/0:26,1:27:47.69:0,48,766	1/1:4,18:22:36.02:329,36,0	1/1:5,14:19:19.55:350,20,0	1/1:1,25:26:56.91:521,57,0	1/1:1,10:11:30.01:274,30,0
chr10	84492534	.	CACA	C	121.49	PASS	AB=0.878;AC=3;AF=0.054;AN=56;BaseQRankSum=5.707;DP=1215;FS=1.057;HRun=0;HaplotypeScore=253.2363;InbreedingCoeff=-0.0558;MQ=53.71;MQ0=17;MQRankSum=-2.348;QD=1.23;ReadPosRankSum=-2.609;VQSLOD=2.3102;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:32,20:49:89.65:90,0,419	0/0:10,0:10:24.07:0,24,504	0/0:56,0:29:84.16:0,84,1619	0/0:60,0:38:99:0,102,1960	0/0:27,0:26:47.15:0,47,818	0/1:26,0:25:17.26:17,0,31	0/0:38,0:38:96.19:0,96,2081	0/0:47,0:45:99:0,129,2632	0/0:52,0:52:99:0,138,2973	0/0:71,0:68:99:0,193,4109	0/0:22,0:22:35.48:0,35,656	0/0:46,0:46:99:0,120,2596	0/0:46,0:46:99:0,132,2799	0/0:52,0:52:99:0,135,2762	0/0:47,0:47:99:0,120,2497	0/0:41,0:41:99:0,120,2615	0/0:46,0:46:99:0,117,2584	0/0:27,0:27:25.70:0,26,1529	0/0:38,0:31:87.77:0,88,1848	0/0:37,0:37:80.93:0,81,1337	0/0:110,0:109:99:0,301,6509	0/0:43,0:43:86.82:0,87,1350	0/0:27,0:27:66.10:0,66,1285	0/0:74,0:74:99:0,211,4514	0/1:19,2:20:99:114,0,287	0/0:49,0:49:99:0,134,2926	0/0:34,0:34:99:0,102,2166	0/0:14,0:14:39.10:0,39,684
chr10	84492537	.	A	AACACACACATACACAC	851.44	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=7.601;DP=1235;FS=1.858;HRun=0;HaplotypeScore=536.4792;InbreedingCoeff=0.5170;MQ=53.79;MQ0=17;MQRankSum=-3.242;QD=3.98;ReadPosRankSum=-6.817;VQSLOD=-0.7152;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:48,0:47:29.74:526,30,0	0/0:11,0:11:3.06:0,3,370	0/0:58,0:32:64.98:0,65,1145	0/0:63,0:39:76.12:0,76,1607	0/0:27,0:26:32.73:0,33,1030	1/1:5,21:33:0.61:80,1,0	0/0:42,0:42:62.55:0,63,2847	0/0:49,0:49:93.99:0,94,2884	0/0:54,0:54:99:0,123,3737	0/0:69,0:66:8.56:0,9,4798	0/1:22,0:22:4.37:4,0,469	0/0:46,0:46:99:0,108,3925	0/0:48,0:48:99:0,117,4256	0/0:51,0:51:99:0,123,4589	0/0:47,0:47:99:0,108,4071	0/1:41,0:41:6.60:7,0,3005	0/1:45,0:45:43.12:43,0,2859	0/0:27,0:27:54.26:0,54,2807	0/0:40,0:33:73.24:0,73,2129	0/0:35,0:36:54.12:0,54,1847	0/0:108,0:108:99:0,278,9555	0/0:44,0:44:44.98:0,45,1324	0/0:29,0:29:57.19:0,57,1961	0/0:72,0:73:99:0,195,7260	1/1:16,0:21:17.99:332,18,0	0/0:47,0:48:99:0,127,4252	0/0:34,0:34:93.26:0,93,3438	0/0:14,0:14:24.05:0,24,711
chr10	84494392	.	C	CTT	446.09	PASS	AB=0.887;AC=12;AF=0.214;AN=56;BaseQRankSum=1.340;DP=429;FS=24.089;HRun=0;HaplotypeScore=239.0956;InbreedingCoeff=0.4187;MQ=30.88;MQ0=2;MQRankSum=-5.090;QD=3.26;ReadPosRankSum=-3.939;VQSLOD=0.8514;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,11:14:29.64:206,30,0	0/1:6,0:6:0.16:0,0,0	0/0:10,0:4:5.98:0,6,66	0/0:12,0:4:9.03:0,9,136	0/0:17,0:18:9.07:0,9,105	0/0:16,0:17:9.76:0,10,53	0/0:8,0:8:4.15:0,4,43	0/0:16,0:15:38.33:0,38,497	1/1:26,0:26:7.01:32,7,0	0/1:26,2:28:44.85:45,0,484	1/1:5,6:11:5.47:40,5,0	0/0:23,0:23:14.52:0,15,161	0/0:16,0:15:11.30:0,11,175	0/0:11,0:11:2.50:0,3,38	0/0:19,0:19:6.55:0,7,71	1/1:11,9:20:23.54:160,24,0	0/1:3,5:8:19.87:110,0,20	0/0:5,0:5:14.96:0,15,166	0/0:16,0:15:44.91:0,45,522	0/1:24,0:24:0.53:1,0,32	0/0:17,0:17:11.92:0,12,153	0/0:29,0:30:6.29:0,6,140	0/0:25,0:25:2.32:0,2,139	0/0:9,0:9:9.03:0,9,128	0/0:9,0:9:5.43:0,5,34	0/0:12,0:12:27.95:0,28,309	0/0:16,0:16:27.44:0,27,332	0/0:3,0:3:1.54:0,2,22
chr10	84494400	.	C	CAG	279.16	PASS	AB=0.984;AC=7;AF=0.125;AN=56;BaseQRankSum=2.499;DP=511;FS=18.875;HRun=0;HaplotypeScore=251.8612;InbreedingCoeff=0.2433;MQ=37.81;MQ0=3;MQRankSum=-3.155;QD=2.76;ReadPosRankSum=0.556;VQSLOD=0.7050;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:12.42:151,0,12	0/1:6,0:6:0.30:0,0,0	0/0:23,0:10:5.05:0,5,189	0/0:18,0:8:16.17:0,16,223	0/0:18,1:19:13.44:0,13,124	0/0:16,1:17:6.64:0,7,28	0/0:11,0:11:11.44:0,11,123	0/0:21,0:19:44.82:0,45,588	0/0:30,0:30:15.19:0,15,154	0/0:35,0:35:20.31:0,20,558	0/1:12,0:12:8.04:29,0,8	0/0:26,0:26:26.65:0,27,223	0/0:17,0:16:17.30:0,17,250	0/0:15,0:15:8.49:0,8,92	0/0:21,0:21:11.84:0,12,111	1/1:21,0:21:6.54:139,7,0	0/1:10,0:10:4.92:64,0,5	0/0:7,0:7:6.67:0,7,132	0/0:20,0:19:53.84:0,54,641	0/0:25,0:25:3.82:0,4,49	0/0:23,0:22:23.89:0,24,291	0/1:31,3:34:15.18:15,0,225	0/0:26,1:27:7.16:0,7,174	0/0:12,0:12:12.02:0,12,161	0/0:9,0:9:1.26:0,1,4	0/0:14,0:14:33.70:0,34,356	0/0:16,0:16:28.82:0,29,369	0/0:3,0:3:0.77:0,1,4
chr10	84494404	.	C	CAG	657.23	PASS	AB=0.938;AC=16;AF=0.286;AN=56;BaseQRankSum=5.772;DP=538;FS=54.201;HRun=0;HaplotypeScore=250.1598;InbreedingCoeff=0.0599;MQ=38.12;MQ0=4;MQRankSum=-4.624;QD=2.73;ReadPosRankSum=1.076;VQSLOD=1.2028;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:29.50:144,0,29	1/1:3,3:6:0.55:2,1,0	0/0:28,0:13:14.50:0,15,277	0/0:22,0:9:25.92:0,26,237	0/0:19,3:22:7.63:0,8,174	1/1:16,1:17:2.71:48,3,0	0/0:12,0:12:0.31:0,0,122	0/0:23,0:21:53.04:0,53,643	0/1:31,0:31:47.86:48,0,182	0/1:29,5:35:99:157,0,302	1/1:12,0:12:11.02:72,11,0	0/1:26,2:28:13.47:13,0,215	0/0:16,2:17:5.11:0,5,240	0/0:13,2:15:14.41:0,14,135	0/1:21,0:21:20.07:20,0,100	1/1:20,1:21:23.25:184,23,0	0/1:11,1:12:32.46:62,0,32	0/0:8,0:8:17.77:0,18,197	0/0:23,0:22:61.25:0,61,615	0/1:24,1:25:29.16:29,0,39	0/0:23,0:22:26.90:0,27,329	0/0:29,6:35:0.67:0,1,269	0/0:25,3:28:0.32:0,0,226	0/0:12,0:12:18.84:0,19,209	0/0:8,1:9:2.54:0,3,15	0/1:12,3:15:33.22:33,0,330	0/0:16,0:16:33.67:0,34,328	0/0:3,0:3:5.64:0,6,29
chr10	84494408	.	T	TTC	199.53	PASS	AB=0.953;AC=16;AF=0.286;AN=56;BaseQRankSum=9.305;DP=589;FS=54.067;HRun=0;HaplotypeScore=264.1943;InbreedingCoeff=-0.0230;MQ=37.42;MQ0=10;MQRankSum=-5.985;QD=0.72;ReadPosRankSum=3.302;VQSLOD=0.6926;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:32.77:0,33,485	0/1:5,1:6:0.15:0,0,0	0/0:38,0:16:45.11:0,45,660	0/0:31,0:12:38.10:0,38,522	0/0:21,1:22:10.84:0,11,269	0/1:18,0:18:15.17:31,0,15	0/0:13,0:12:12.51:0,13,195	0/0:24,0:21:27.15:0,27,678	0/1:31,2:33:31.18:31,0,621	0/1:33,4:37:99:124,0,605	0/0:12,1:13:9.77:0,10,106	0/1:27,2:29:45.72:46,0,307	0/1:19,0:18:3.39:3,0,371	0/0:17,0:17:20.57:0,21,334	0/1:21,0:21:2.90:3,0,228	0/1:21,1:22:10.09:10,0,404	0/0:14,0:14:20.51:0,21,279	0/1:9,0:9:3.82:4,0,238	0/0:28,0:25:19.69:0,20,754	0/1:24,1:26:17.69:18,0,175	0/0:25,0:23:27:0,27,438	0/0:36,0:36:37.69:0,38,638	0/1:28,1:29:25.75:26,0,285	0/0:13,0:13:24.08:0,24,385	1/1:8,1:9:2.21:11,2,0	0/0:17,0:17:21.58:0,22,444	0/1:15,1:16:8.22:8,0,288	1/1:1,2:3:5.63:30,6,0
chr10	84494416	.	C	CAT	871.92	PASS	AB=0.958;AC=19;AF=0.339;AN=56;BaseQRankSum=10.571;DP=655;FS=64.551;HRun=0;HaplotypeScore=279.9414;InbreedingCoeff=-0.1475;MQ=38.29;MQ0=16;MQRankSum=-6.336;QD=2.53;ReadPosRankSum=4.904;VQSLOD=0.5646;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,2:22:35.94:0,36,499	1/1:5,1:6:1.09:3,1,0	0/0:55,0:20:57.09:0,57,751	0/0:45,0:15:41.16:0,41,565	0/1:25,0:25:22.80:23,0,255	0/1:14,0:19:6.99:71,0,7	0/0:11,2:12:12.53:0,13,185	0/1:25,1:23:33.03:33,0,660	0/1:32,2:34:18.37:18,0,641	0/1:38,2:40:99:237,0,564	0/0:14,1:15:7.84:0,8,94	0/1:26,3:29:99:155,0,306	0/1:18,1:18:23.35:23,0,378	0/0:16,1:17:23.51:0,24,339	0/0:22,3:25:7.34:0,7,241	0/1:21,1:22:37.98:38,0,377	0/0:15,1:16:22.10:0,22,288	0/1:10,1:11:24.80:25,0,295	0/1:32,0:28:11.19:11,0,717	0/0:25,1:26:9.73:0,10,180	0/0:27,0:25:31.82:0,32,441	0/0:35,2:37:32.27:0,32,574	0/1:32,1:33:99:121,0,322	0/0:13,0:13:26.96:0,27,379	1/1:9,0:10:2.60:47,3,0	0/1:17,1:18:37.67:38,0,399	0/1:16,1:17:82.92:83,0,244	1/1:3,0:3:6.02:106,6,0
chr10	84494417	.	ACT	A	333.60	PASS	AB=0.899;AC=11;AF=0.196;AN=56;BaseQRankSum=12.054;DP=655;FS=66.538;HRun=0;HaplotypeScore=273.7022;InbreedingCoeff=0.2586;MQ=38.48;MQ0=16;MQRankSum=-8.030;QD=2.55;ReadPosRankSum=6.015;VQSLOD=0.2272;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:35.93:0,36,734	1/1:3,3:6:3.47:11,3,0	0/0:55,0:21:56.31:0,56,957	0/0:43,1:15:42.70:0,43,699	0/0:21,3:25:21.03:0,21,386	1/1:15,1:17:9.85:59,10,0	0/0:14,0:13:10.26:0,10,256	0/0:25,0:22:38.34:0,38,907	0/0:33,0:33:22.97:0,23,855	0/1:32,6:40:99:262,0,719	0/0:13,0:15:1.52:0,2,114	0/0:26,3:29:5.52:0,6,442	0/1:17,2:18:0.38:0,0,483	0/0:15,2:17:25.92:0,26,444	0/0:25,0:25:5.55:0,6,308	0/0:21,1:22:11.20:0,11,525	0/0:15,1:16:3.88:0,4,334	0/0:11,0:11:29.24:0,29,414	0/0:30,0:27:15.70:0,16,983	0/0:25,1:26:5.93:0,6,234	0/0:27,0:25:30.71:0,31,594	0/0:31,6:38:20.53:0,21,790	0/0:30,3:33:0.95:0,1,436	0/0:13,0:13:27.09:0,27,509	1/1:9,1:10:1.82:6,2,0	0/1:16,3:19:67.49:67,0,576	0/1:15,0:17:52.28:52,0,328	0/1:3,0:3:2.73:4,0,3
chr10	84494422	.	C	CAT	40.98	PASS	AB=0.929;AC=4;AF=0.071;AN=56;BaseQRankSum=9.086;DP=701;FS=37.520;HRun=0;HaplotypeScore=290.7605;InbreedingCoeff=0.1849;MQ=38.34;MQ0=22;MQRankSum=-4.406;QD=0.59;ReadPosRankSum=3.388;VQSLOD=1.0758;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:42.46:0,42,672	0/0:6,1:7:1.55:0,2,34	0/0:64,0:21:63.12:0,63,858	0/0:50,0:16:47.11:0,47,644	0/0:24,1:25:31.50:0,32,443	0/0:20,0:20:3.19:0,3,27	0/0:15,0:13:21.23:0,21,295	0/0:26,0:24:59.79:0,60,736	0/0:33,2:35:35.71:0,36,724	0/1:37,4:41:99:114,0,809	0/0:15,1:16:17.79:0,18,233	0/0:28,2:30:18.73:0,19,515	0/0:20,0:19:34.75:0,35,522	0/0:18,0:18:33.91:0,34,499	0/0:27,0:26:48.25:0,48,726	0/0:21,1:22:19.54:0,20,435	0/0:19,0:19:35.57:0,36,451	0/0:13,0:13:35.71:0,36,515	0/0:30,0:26:64.69:0,65,898	0/0:25,1:26:27.15:0,27,392	0/0:29,0:27:41.28:0,41,587	0/0:40,0:40:56.09:0,56,789	0/0:34,1:35:23.39:0,23,458	0/0:15,0:15:30.04:0,30,410	1/1:10,1:11:1.62:6,2,0	0/0:22,0:21:59.63:0,60,776	0/1:17,1:18:3.55:4,0,342	0/0:1,2:3:1.15:0,1,15
chr10	84494429	.	AC	A	399.80	PASS	AB=0.898;AC=12;AF=0.214;AN=56;BaseQRankSum=12.996;DP=741;FS=84.866;HRun=2;HaplotypeScore=282.4694;InbreedingCoeff=-0.0713;MQ=40.33;MQ0=34;MQRankSum=-9.270;QD=1.67;ReadPosRankSum=4.292;VQSLOD=-0.4898;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:42.59:0,43,759	0/1:8,1:9:1.90:2,0,40	0/0:69,0:22:59.93:0,60,831	0/0:58,2:18:35.25:0,35,587	0/0:24,1:26:22.98:0,23,480	0/1:16,4:22:58.68:59,0,105	0/1:15,1:14:3.90:4,0,224	0/0:23,1:21:17.87:0,18,679	0/0:29,0:34:10.05:0,10,723	0/1:36,3:42:99:285,0,625	0/0:16,1:17:11.50:0,11,258	0/1:27,3:31:24.41:24,0,519	0/0:18,0:18:14.77:0,15,583	0/0:17,0:17:37.98:0,38,531	0/0:24,1:26:27.51:0,28,678	0/1:17,5:24:3.82:4,0,343	0/0:21,0:21:38.19:0,38,532	0/0:13,0:13:39.13:0,39,570	0/0:31,0:26:38.24:0,38,804	0/0:22,1:26:31.69:0,32,477	0/0:30,2:28:41.78:0,42,599	0/0:39,2:42:16.32:0,16,764	0/1:37,2:39:31.36:31,0,523	0/0:18,0:18:41.02:0,41,617	0/1:9,4:12:11.62:30,0,12	0/1:21,1:21:36.75:37,0,560	0/1:15,1:18:44.97:45,0,340	1/1:3,0:3:3.85:20,4,0
chr10	84494430	.	C	CA	1321.92	PASS	AB=0.884;AC=14;AF=0.250;AN=56;BaseQRankSum=13.734;DP=745;FS=100.490;HRun=1;HaplotypeScore=282.2076;InbreedingCoeff=-0.2102;MQ=39.29;MQ0=34;MQRankSum=-8.517;QD=4.14;ReadPosRankSum=2.120;VQSLOD=0.3918;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:26:46.75:0,47,717	0/0:4,4:9:0.58:0,1,38	0/0:69,0:21:48.66:0,49,756	0/0:59,0:18:27.75:0,28,560	0/0:22,4:26:18.65:0,19,442	0/1:20,2:22:64.62:65,0,97	0/0:13,1:14:4.66:0,5,217	0/1:21,2:22:24.79:25,0,622	0/1:29,4:34:56.65:57,0,663	0/1:29,10:42:99:689,0,609	0/0:15,1:17:13.93:0,14,244	0/1:25,5:31:68.45:68,0,487	0/1:15,3:18:15.10:15,0,523	0/0:15,2:17:38.63:0,39,499	0/1:25,0:26:22.24:22,0,600	0/1:21,3:24:49.34:49,0,321	0/0:20,1:21:40.04:0,40,518	0/0:14,0:15:39.13:0,39,540	0/0:29,1:27:4.80:0,5,743	0/0:18,7:26:26.95:0,27,433	0/0:30,2:28:41.77:0,42,564	0/0:33,7:42:1.50:0,1,693	0/1:32,7:39:53.34:53,0,484	0/0:18,0:18:22.72:0,23,579	0/1:10,2:12:13.13:24,0,13	0/1:17,4:21:99:119,0,516	0/1:16,1:18:99:186,0,310	1/1:0,3:3:8.76:102,9,0
chr10	84494449	.	AACACAC	A	1408.15	PASS	AB=0.727;AC=7;AF=0.125;AN=56;BaseQRankSum=2.894;DP=796;FS=24.556;HRun=0;HaplotypeScore=309.0286;InbreedingCoeff=0.5564;MQ=39.33;MQ0=38;MQRankSum=-1.784;QD=11.27;ReadPosRankSum=-0.487;VQSLOD=1.1088;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:32:0.50:0,0,33	0/1:6,7:13:3.60:152,0,4	0/0:53,0:12:12.04:0,12,277	0/0:54,0:12:12.42:0,12,153	0/0:30,0:32:50.71:0,51,1129	0/0:16,0:24:16.86:0,17,111	0/0:10,0:19:15.39:0,15,178	0/0:30,0:27:62.91:0,63,940	0/0:34,0:35:59.90:0,60,1696	0/1:36,6:41:99:417,0,418	1/1:14,7:21:25.90:309,26,0	0/0:29,0:31:60.05:0,60,1469	0/0:25,0:24:49.27:0,49,1271	0/0:16,0:16:31.94:0,32,877	0/0:17,0:27:18.01:0,18,360	0/1:11,12:23:0.74:347,0,1	1/1:12,14:26:10.05:320,10,0	0/0:14,0:16:36.12:0,36,1107	0/0:16,0:17:32.06:0,32,630	0/0:23,0:33:13.39:0,13,141	0/0:29,0:27:20.14:0,20,330	0/0:46,0:48:89.91:0,90,1613	0/0:40,0:44:83.98:0,84,1669	0/0:23,0:23:60.21:0,60,1849	0/0:10,0:15:8.83:0,9,57	0/0:24,0:28:70.81:0,71,1186	0/0:13,0:21:23.95:0,24,326	0/0:7,0:7:11.90:0,12,110
chr10	84495624	.	A	AT	1931.11	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=-9.077;DP=283;FS=11.304;HRun=8;HaplotypeScore=33.5392;InbreedingCoeff=0.7724;MQ=68.12;MQ0=2;MQRankSum=-0.571;QD=20.54;ReadPosRankSum=-2.420;VQSLOD=1.6736;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.03:0,63,575	0/0:4,0:4:12.01:0,12,110	0/0:9,0:8:9.57:0,10,53	0/1:13,0:8:11.15:11,0,37	0/0:2,0:2:6:0,6,55	0/0:8,0:8:21.01:0,21,192	1/1:0,7:7:21.06:242,21,0	1/1:5,17:21:48.14:552,48,0	0/0:3,0:3:9:0,9,82	0/0:6,0:6:18.01:0,18,165	0/0:11,0:11:30.02:0,30,275	0/0:2,0:2:6:0,6,55	0/0:5,0:5:12.01:0,12,110	0/0:4,0:4:9:0,9,82	1/1:1,3:4:6.02:69,6,0	0/0:6,0:6:17.05:0,17,143	0/0:41,0:41:99:0,117,1056	0/0:30,0:30:84:0,84,760	1/1:4,13:16:39.12:449,39,0	1/1:1,6:7:15.04:173,15,0	1/1:1,11:12:33.10:380,33,0	0/0:1,0:1:3:0,3,27	./.	0/0:5,0:5:12.01:0,12,110	0/0:12,0:12:27.01:0,27,247	0/0:13,0:13:27.01:0,27,247	1/1:3,9:12:21.06:242,21,0	0/0:3,0:3:9:0,9,82
chr10	84495732	.	CTTTATTTTTATT	C	3827.44	PASS	AC=22;AF=0.579;AN=38;BaseQRankSum=4.353;DP=283;FS=0.000;HRun=0;HaplotypeScore=100.6419;InbreedingCoeff=0.7179;MQ=58.14;MQ0=9;MQRankSum=-5.099;QD=24.22;ReadPosRankSum=0.884;VQSLOD=2.3630;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,9:25:15.01:431,15,0	./.	1/1:14,0:7:0.47:1,0,0	0/0:30,0:10:11.86:0,12,158	0/0:10,0:10:18.06:0,18,1036	1/1:5,11:16:30.10:1009,30,0	./.	1/1:12,0:11:3:27,3,0	./.	1/1:7,3:10:9.03:308,9,0	1/1:4,3:7:3.01:103,3,0	./.	0/0:4,0:4:9.03:0,9,517	0/0:5,0:5:9.03:0,9,524	0/0:5,0:5:6.02:0,6,214	1/1:4,2:6:3.01:103,3,0	1/1:19,10:29:15.10:612,15,0	0/0:25,0:24:60.21:0,60,3428	1/1:11,7:18:21.07:719,21,0	1/1:5,3:8:6.02:206,6,0	./.	./.	./.	0/0:5,0:5:3.01:0,3,175	./.	0/0:7,0:14:24.07:0,24,293	1/1:10,3:13:9.03:308,9,0	./.
chr10	84496195	.	T	TA	554.51	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=-4.956;DP=644;FS=0.778;HRun=8;HaplotypeScore=64.3611;InbreedingCoeff=0.6617;MQ=74.89;MQ0=1;MQRankSum=0.299;QD=10.27;ReadPosRankSum=-2.282;VQSLOD=1.6513;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,141,1274	0/0:15,0:15:41.99:0,42,374	0/1:13,0:13:7.75:8,0,182	0/1:15,0:14:3.47:3,0,141	0/0:20,0:20:53.88:0,54,468	0/0:24,0:24:66.02:0,66,601	0/0:21,0:21:57.01:0,57,517	0/0:27,0:27:71.97:0,72,640	0/0:24,0:24:63.02:0,63,572	0/0:19,0:19:47.96:0,48,423	0/0:17,0:17:47.80:0,48,419	0/0:20,0:20:57.03:0,57,521	0/0:15,0:15:39:0,39,352	0/0:23,0:23:69.02:0,69,625	0/0:35,0:35:90:0,90,813	0/0:21,0:21:53.87:0,54,468	0/0:34,0:34:96.05:0,96,879	0/0:22,0:22:53.95:0,54,476	0/0:22,0:22:59.61:0,60,546	0/0:27,0:27:56.96:0,57,512	0/0:22,0:22:54.01:0,54,490	0/0:28,0:28:78.02:0,78,707	0/0:28,0:28:64.25:0,64,595	0/0:22,0:22:60.03:0,60,549	0/0:24,0:24:63.01:0,63,573	1/1:2,17:19:26.69:561,27,0	0/0:23,0:23:56.98:0,57,511	1/1:1,5:6:9.03:104,9,0
chr10	84496783	.	TA	T	5389.71	PASS	AB=0.923;AC=35;AF=0.625;AN=56;BaseQRankSum=9.004;DP=631;FS=4.239;HRun=12;HaplotypeScore=89.4688;InbreedingCoeff=0.8681;MQ=63.09;MQ0=0;MQRankSum=-1.268;QD=12.68;ReadPosRankSum=5.769;VQSLOD=4.9945;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,30:35:71.69:557,72,0	1/1:1,0:10:16.29:48,16,0	0/1:11,1:11:27.49:55,0,27	0/0:12,0:10:12.07:0,12,129	0/0:21,0:23:50.85:0,51,467	1/1:3,20:23:30.89:415,31,0	1/1:5,30:35:77.66:604,78,0	1/1:4,24:29:73.72:560,74,0	0/0:18,0:18:19.07:0,19,354	1/1:6,0:38:65.17:191,65,0	1/1:2,0:19:28.28:83,28,0	0/0:13,0:13:39.04:0,39,378	0/0:12,1:13:6.80:0,7,242	0/0:25,1:26:36.80:0,37,504	1/1:6,13:20:34.87:261,35,0	1/1:1,0:27:17.34:101,17,0	1/1:2,0:27:50.92:150,51,0	0/0:34,0:35:74.10:0,74,770	1/1:7,10:17:2.42:202,2,0	1/1:1,13:14:29.83:232,30,0	1/1:3,18:21:50.80:395,51,0	0/0:15,1:16:11.05:0,11,269	0/0:16,2:20:20.78:0,21,341	0/0:30,0:30:69.48:0,69,676	1/1:3,16:19:41.81:325,42,0	1/1:9,20:32:64.88:465,65,0	1/1:8,19:29:30.37:399,30,0	1/1:2,16:18:44.79:348,45,0
chr10	84497589	.	AATTT	A	2216.62	PASS	AB=0.516;AC=5;AF=0.089;AN=56;BaseQRankSum=10.262;DP=695;FS=11.132;HRun=0;HaplotypeScore=124.9692;InbreedingCoeff=0.7801;MQ=80.58;MQ0=0;MQRankSum=-9.779;QD=51.55;ReadPosRankSum=2.674;VQSLOD=4.7067;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,157,4330	0/0:11,0:11:33.11:0,33,917	0/0:25,0:26:64.43:0,64,1637	0/0:21,0:20:54.19:0,54,1495	0/0:37,0:37:99:0,111,3095	0/0:20,0:20:60.21:0,60,1672	0/0:26,0:26:78.27:0,78,2177	0/0:31,0:31:84.28:0,84,2266	0/0:27,0:27:81.26:0,81,2193	0/0:27,0:27:81.28:0,81,2224	0/0:30,0:30:87.30:0,87,2410	0/0:20,0:20:54.19:0,54,1477	0/0:20,0:20:60.21:0,60,1638	0/0:27,0:27:75.26:0,75,2079	1/1:1,16:17:45.15:898,45,0	0/0:17,0:17:51.18:0,51,1425	0/0:24,0:24:72.25:0,72,2006	0/0:22,0:22:66.23:0,66,1783	0/0:20,0:20:60.20:0,60,1562	0/0:29,0:29:84.29:0,84,2307	0/0:36,0:36:99:0,108,2920	0/0:29,0:29:87.30:0,87,2387	0/0:18,0:18:54.19:0,54,1504	0/0:23,0:23:66.23:0,66,1805	0/0:28,0:28:84.29:0,84,2345	0/1:1,15:16:35.82:850,0,36	0/0:31,0:31:90.31:0,90,2457	1/1:0,10:10:30.10:599,30,0
chr10	84498767	.	C	CA	1208.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.273;DP=529;FS=1.538;HRun=1;HaplotypeScore=57.3031;InbreedingCoeff=0.9787;MQ=82.27;MQ0=0;MQRankSum=-1.277;QD=37.78;ReadPosRankSum=0.677;VQSLOD=3.9908;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:87.29:1304,87,0	0/0:11,0:11:33.11:0,33,429	0/0:28,0:28:72.17:0,72,892	0/0:25,0:24:60.17:0,60,751	0/0:21,0:21:54.13:0,54,655	0/0:15,0:15:42.12:0,42,530	0/0:21,0:21:60.19:0,60,778	0/0:30,0:30:81.26:0,81,1051	0/0:20,0:20:57.17:0,57,725	0/0:24,0:24:69.22:0,69,877	0/0:10,0:10:27.08:0,27,337	0/0:17,0:17:51.17:0,51,662	0/0:18,0:18:54.18:0,54,701	0/0:18,0:18:54.15:0,54,685	0/0:19,0:19:54.18:0,54,701	0/0:16,0:16:48.16:0,48,622	0/0:32,0:32:90.28:0,90,1154	0/0:16,0:16:48.16:0,48,623	0/0:15,0:15:39.11:0,39,482	0/0:12,0:12:30.10:0,30,390	0/0:24,0:24:72.22:0,72,920	0/0:16,0:16:45.13:0,45,570	0/0:11,0:11:21.07:0,21,272	0/0:14,0:14:39.13:0,39,506	0/0:20,0:20:54.18:0,54,700	0/0:21,0:21:60.19:0,60,767	0/0:18,0:18:51.17:0,51,662	0/0:5,0:5:15.05:0,15,195
chr10	84500053	.	A	ATG	1067	PASS	AB=0.906;AC=26;AF=0.542;AN=48;BaseQRankSum=-4.285;DP=552;FS=9.328;HRun=0;HaplotypeScore=92.1840;InbreedingCoeff=0.5513;MQ=60.79;MQ0=7;MQRankSum=2.049;QD=3.50;ReadPosRankSum=-0.701;VQSLOD=1.5221;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:21:5.68:0,6,28	0/0:4,0:8:8.20:0,8,41	./.	./.	1/1:22,0:20:12.03:147,12,0	0/0:17,0:25:8.52:0,9,42	0/0:11,0:14:5.68:0,6,28	./.	1/1:12,6:20:2.61:44,3,0	0/0:15,0:17:4.88:0,5,20	./.	1/1:15,0:15:11.77:133,12,0	1/1:12,3:15:3.48:46,3,0	1/1:9,0:14:9:78,9,0	1/1:13,6:20:6.01:70,6,0	0/0:14,0:20:9.41:0,9,44	0/0:17,0:22:2.84:0,3,14	1/1:13,7:20:15.52:222,16,0	1/1:17,4:22:11.95:145,12,0	0/1:20,5:26:20.01:97,0,20	0/1:30,0:29:0:0,0,0	1/1:20,0:20:6:66,6,0	1/1:19,0:19:2.83:24,3,0	1/1:23,6:36:3.01:44,3,0	0/0:12,0:18:14.20:0,14,70	0/0:17,0:17:2.67:0,3,13	1/1:15,4:21:9.02:114,9,0	0/0:13,0:15:8.58:0,9,44
chr10	84501060	.	G	GTTT	4258.79	PASS	AB=0.581;AC=32;AF=0.571;AN=56;BaseQRankSum=3.889;DP=516;FS=1.629;HRun=13;HaplotypeScore=101.5156;InbreedingCoeff=0.7692;MQ=87.64;MQ0=1;MQRankSum=-1.999;QD=14.54;ReadPosRankSum=-1.623;VQSLOD=3.2833;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,2:33:65.63:567,66,0	1/1:2,0:6:4.98:11,5,0	0/0:42,0:34:16.17:0,16,162	0/0:30,0:19:8.34:0,8,74	0/0:15,0:20:27.79:0,28,275	0/1:2,2:19:7.95:104,0,8	1/1:4,9:16:27.05:420,27,0	1/1:11,12:28:55.66:763,56,0	0/0:15,0:19:26.63:0,27,287	0/1:8,0:19:8.85:66,0,9	1/1:3,0:14:12.87:38,13,0	0/0:18,0:20:43.45:0,43,467	0/0:8,0:9:10.47:0,10,126	0/0:12,0:12:20.85:0,21,226	1/1:2,5:8:18.04:257,18,0	1/1:1,0:12:9.36:23,9,0	1/1:9,0:36:1.37:37,1,0	0/0:20,0:23:65.92:0,66,652	1/1:10,7:21:39.02:494,39,0	1/1:6,7:15:27:367,27,0	1/1:5,9:15:15.03:227,15,0	0/0:15,0:17:37.40:0,37,393	0/0:12,0:14:10.23:0,10,126	0/0:15,0:15:29.85:0,30,322	1/1:3,0:9:6.23:17,6,0	1/1:4,1:12:23.97:256,24,0	1/1:4,11:20:36.04:520,36,0	1/1:4,0:8:11.95:91,12,0
chr10	84502072	.	A	AC	1470.02	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.046;DP=487;FS=16.108;HRun=2;HaplotypeScore=48.9134;InbreedingCoeff=0.8659;MQ=85.23;MQ0=0;MQRankSum=-2.967;QD=36.75;ReadPosRankSum=0.011;VQSLOD=1.9775;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.24:0,78,966	0/0:3,0:3:9.03:0,9,111	0/0:12,0:12:27.08:0,27,335	0/0:18,0:18:46.48:0,46,565	0/0:15,0:15:45.14:0,45,557	0/0:2,0:2:6.02:0,6,74	0/0:29,0:29:81.23:0,81,989	0/0:22,0:22:60.18:0,60,733	0/0:18,0:18:54.17:0,54,669	0/0:23,0:23:66.21:0,66,818	0/0:13,0:13:39.11:0,39,472	0/0:19,0:19:57.18:0,57,706	0/0:13,0:13:39.12:0,39,483	0/0:17,0:17:48.15:0,48,594	1/1:0,14:14:42.14:605,42,0	0/0:9,0:9:27.08:0,27,334	0/0:26,0:26:78.25:0,78,966	0/0:16,0:16:42.11:0,42,506	0/0:23,0:23:60:0,60,717	0/0:12,0:12:36.11:0,36,446	0/0:39,0:39:99:0,108,1310	0/0:16,0:16:48.15:0,48,595	0/0:12,0:12:33.10:0,33,409	0/0:32,0:32:87.23:0,87,1061	0/0:22,0:22:60.17:0,60,722	1/1:1,12:13:1.93:479,2,0	0/0:8,0:8:24.08:0,24,297	1/1:1,12:13:36.12:517,36,0
chr10	84502898	.	CAA	C	850.89	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.570;DP=395;FS=6.512;HRun=2;HaplotypeScore=55.9775;InbreedingCoeff=0.9564;MQ=84.79;MQ0=0;MQRankSum=-1.460;QD=40.52;ReadPosRankSum=1.735;VQSLOD=3.4923;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.31:0,93,1832	0/0:5,0:5:15.05:0,15,305	0/0:22,0:22:59.32:0,59,1021	0/0:18,0:18:48.08:0,48,805	0/0:7,0:7:18.06:0,18,366	1/1:0,12:12:36.12:581,36,0	0/0:24,0:24:72.23:0,72,1425	0/0:20,0:20:57.18:0,57,1089	0/0:23,0:23:69.21:0,69,1306	0/0:15,0:15:45.15:0,45,888	0/0:7,0:7:18.06:0,18,356	0/0:11,0:11:33.03:0,33,592	0/0:8,0:8:24.01:0,24,444	0/0:8,0:8:24.08:0,24,487	0/0:11,0:11:33.11:0,33,670	0/0:16,0:16:48.16:0,48,940	0/0:21,0:21:63.20:0,63,1241	0/0:8,0:8:24.07:0,24,451	0/0:17,0:17:51.18:0,51,1036	0/0:11,0:11:33.11:0,33,671	0/0:19,0:19:57.20:0,57,1145	0/0:12,0:12:36.12:0,36,731	0/0:5,0:5:15.05:0,15,305	0/0:20,0:20:60.10:0,60,1125	1/1:0,9:9:24.08:391,24,0	0/0:14,0:14:42.14:0,42,847	0/0:15,0:15:42.11:0,42,810	0/0:4,0:4:12.04:0,12,244
chr10	84503579	.	AT	A	1501.57	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.440;DP=560;FS=5.213;HRun=1;HaplotypeScore=136.8798;InbreedingCoeff=0.9972;MQ=73.08;MQ0=0;MQRankSum=-0.253;QD=37.54;ReadPosRankSum=1.575;VQSLOD=3.1029;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.17:0,72,1009	0/0:9,0:9:21:0,21,279	0/0:24,0:24:62.63:0,63,862	0/0:13,0:13:29.38:0,29,422	0/0:18,0:18:51.10:0,51,710	1/1:0,19:19:54.18:746,54,0	0/0:22,0:22:63.08:0,63,864	0/0:33,0:33:99:0,99,1419	0/0:19,0:19:57.18:0,57,810	0/0:32,0:31:90.29:0,90,1285	0/0:14,0:14:39.13:0,39,557	0/0:24,0:24:72.18:0,72,986	0/0:19,0:19:57.14:0,57,775	0/0:12,0:12:30.06:0,30,399	0/0:16,0:16:45.01:0,45,586	0/0:16,0:16:48.09:0,48,669	0/0:18,0:18:51.01:0,51,683	0/0:21,0:21:63.18:0,63,897	0/0:29,0:29:87.08:0,87,1138	0/0:20,0:20:57.19:0,57,821	0/0:16,0:16:45.15:0,45,654	0/0:24,0:24:69.19:0,69,948	0/0:16,0:16:45.15:0,45,655	0/0:13,0:13:39.02:0,39,503	1/1:0,21:21:63.21:877,63,0	0/0:35,0:35:99:0,102,1406	0/0:15,0:15:45.15:0,45,650	0/0:16,0:16:45.07:0,45,628
chr10	84503623	.	G	GTT	2162.34	PASS	AB=0.910;AC=12;AF=0.214;AN=56;BaseQRankSum=14.059;DP=927;FS=1.312;HRun=1;HaplotypeScore=242.4510;InbreedingCoeff=-0.2529;MQ=53.90;MQ0=31;MQRankSum=-13.432;QD=5.68;ReadPosRankSum=5.879;VQSLOD=-0.2817;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:88.18:0,88,1327	0/1:14,0:12:23.48:23,0,136	0/0:50,0:37:95.39:0,95,1436	0/0:49,0:33:80.99:0,81,1091	0/0:19,0:19:57.19:0,57,865	0/0:35,0:34:87.28:0,87,1308	0/1:43,0:36:73.69:74,0,347	0/0:47,0:41:69.65:0,70,1391	0/0:23,0:23:63.19:0,63,938	0/1:46,0:36:21.50:21,0,761	0/1:25,0:20:19.03:19,0,183	0/0:18,0:18:54.17:0,54,802	0/0:22,0:22:63.20:0,63,938	0/0:19,0:19:51.16:0,51,758	0/1:13,17:28:31.74:646,0,32	0/1:38,0:34:99:157,0,364	0/1:44,0:37:5.25:5,0,604	0/0:18,0:17:48.12:0,48,683	0/1:33,0:31:28.93:29,0,610	0/1:24,0:23:9.69:10,0,277	0/0:86,0:76:78.58:0,79,1451	0/0:29,0:29:84.27:0,84,1260	0/0:15,0:15:42.12:0,42,615	0/0:43,0:41:99:0,111,1604	0/0:33,0:31:72.18:0,72,1062	0/1:29,19:45:99:835,0,595	0/1:21,0:20:34.49:34,0,180	0/1:3,11:14:12.68:457,0,13
chr10	84503625	.	C	CTG	5743.85	PASS	AB=0.818;AC=14;AF=0.250;AN=56;BaseQRankSum=11.075;DP=945;FS=1.689;HRun=0;HaplotypeScore=230.8731;InbreedingCoeff=-0.3248;MQ=53.43;MQ0=36;MQRankSum=-12.413;QD=10.92;ReadPosRankSum=2.673;VQSLOD=4.7939;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:38:88.18:0,88,1329	0/1:10,7:14:99:198,0,114	0/0:49,0:34:89.08:0,89,1198	0/0:48,0:32:79.99:0,80,1080	0/0:19,0:19:57.19:0,57,867	0/0:38,0:37:65.77:0,66,823	0/1:31,16:39:99:484,0,279	0/1:42,7:41:99:261,0,1116	0/0:24,0:24:63.21:0,63,951	0/1:29,16:35:99:548,0,542	0/1:18,8:20:99:209,0,166	0/0:18,0:18:51.17:0,51,779	0/0:23,0:23:66.21:0,66,984	0/0:19,0:19:51.16:0,51,760	0/1:30,0:28:37.08:595,0,37	0/1:20,18:34:99:735,0,272	0/1:33,11:37:99:342,0,611	0/0:18,0:17:48.14:0,48,703	0/1:22,11:30:99:484,0,435	0/1:16,8:23:99:205,0,168	0/1:86,4:78:18.19:18,0,1369	0/0:29,0:29:81.28:0,81,1237	0/0:15,0:15:42.14:0,42,635	0/0:43,0:41:99:0,108,1606	0/0:36,0:34:68.71:0,69,617	0/1:47,1:45:99:860,0,657	0/1:12,9:20:99:371,0,127	0/1:14,0:14:12.75:433,0,13
chr10	84503697	.	CTG	C	3995.70	PASS	AB=0.880;AC=12;AF=0.214;AN=56;BaseQRankSum=3.464;DP=1132;FS=5.170;HRun=0;HaplotypeScore=203.2745;InbreedingCoeff=0.2139;MQ=43.44;MQ0=157;MQRankSum=4.976;QD=7.23;ReadPosRankSum=0.459;VQSLOD=3.2053;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:58.52:0,59,726	0/0:13,0:8:12.04:0,12,192	0/1:50,0:1:0:0,0,0	0/1:44,0:4:5.77:6,0,35	0/0:15,0:14:26.45:0,26,434	0/0:45,0:41:59.99:0,60,882	1/1:26,21:39:30.48:530,30,0	0/1:26,2:9:20.91:86,0,21	0/0:29,0:27:57.19:0,57,939	0/0:50,1:34:19.37:0,19,1126	0/0:26,0:19:14.88:0,15,217	0/0:22,0:20:60.21:0,60,1008	0/0:28,1:29:30.20:0,30,1041	0/0:26,0:26:72.23:0,72,1189	0/1:41,3:35:2.52:3,0,511	0/0:36,4:31:10.07:0,10,633	0/1:56,8:53:99:176,0,1056	0/0:38,0:37:97.15:0,97,1534	0/1:20,4:12:31.20:208,0,31	0/1:17,5:20:80.27:80,0,116	1/1:107,87:166:13.03:2384,13,0	0/0:20,0:20:42.12:0,42,701	0/0:18,0:17:30.10:0,30,501	0/0:62,0:59:99:0,138,2293	0/0:32,0:26:38.86:0,39,609	0/0:48,2:29:1.51:0,2,974	0/1:13,23:33:99:523,0,137	0/0:10,0:9:24.08:0,24,390
chr10	84503709	.	CTGAG	C	1353.64	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=3.667;DP=1069;FS=0.683;HRun=0;HaplotypeScore=226.2728;InbreedingCoeff=0.7468;MQ=45.51;MQ0=108;MQRankSum=2.641;QD=13.67;ReadPosRankSum=-1.275;VQSLOD=3.0107;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,28:46:82.11:1448,82,0	0/0:13,0:9:14.21:0,14,399	0/0:54,0:5:11.67:0,12,225	0/1:49,0:10:0.37:0,0,282	0/0:15,0:14:32.40:0,32,853	0/0:38,0:34:65.74:0,66,1453	0/0:40,0:34:56.60:0,57,1014	0/0:33,0:17:42.50:0,42,881	0/0:29,0:27:75.26:0,75,1940	0/0:46,0:37:67.65:0,68,2089	0/0:18,0:15:21.01:0,21,468	0/0:24,0:22:66.23:0,66,1717	0/0:31,0:31:90.29:0,90,2186	0/0:27,0:27:78.24:0,78,1996	0/0:43,0:35:37.70:0,38,919	0/0:39,0:31:57.77:0,58,1278	0/0:55,0:49:99:0,103,2063	0/0:36,0:36:90.68:0,91,2447	0/0:21,0:10:30.10:0,30,613	0/0:16,0:14:24.55:0,25,619	0/0:182,0:162:99:0,245,5257	0/0:20,0:20:42.13:0,42,1055	0/0:15,0:15:30:0,30,754	0/0:57,0:54:99:0,138,3211	0/0:30,0:25:43.38:0,43,1035	0/0:40,0:28:63.78:0,64,1726	0/0:35,0:33:66.88:0,67,1290	0/0:13,0:13:36.08:0,36,901
chr10	84503716	.	TGTGC	T	190.35	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.459;DP=1078;FS=1.589;HRun=0;HaplotypeScore=228.9905;InbreedingCoeff=0.9550;MQ=45.54;MQ0=87;MQRankSum=0.421;QD=3.81;ReadPosRankSum=0.433;VQSLOD=2.1578;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:46,4:47:51.77:285,52,0	0/0:14,0:11:14.21:0,14,419	0/0:52,0:6:15.52:0,16,350	0/0:52,0:11:21.36:0,21,371	0/0:14,0:13:35.41:0,35,972	0/0:33,0:30:63.05:0,63,1535	0/0:42,0:36:61.24:0,61,1481	0/0:48,0:25:72.23:0,72,1748	0/0:31,0:30:87.16:0,87,2292	0/0:48,0:38:99:0,105,2460	0/0:18,0:15:17.94:0,18,485	0/0:25,0:24:72.23:0,72,1890	0/0:32,0:32:96.28:0,96,2420	0/0:28,0:28:84.27:0,84,2155	0/0:37,0:32:38.79:0,39,838	0/0:35,0:29:54.01:0,54,1369	0/0:51,0:46:99:0,101,2249	0/0:38,1:39:64.55:0,65,2714	0/0:29,0:13:39.11:0,39,993	0/0:20,0:18:27.09:0,27,717	0/0:183,0:163:99:0,269,7407	0/0:19,0:19:39.13:0,39,1113	0/0:16,0:16:33.11:0,33,909	0/0:53,0:50:99:0,129,3340	0/0:28,0:24:49.34:0,49,1320	0/0:34,0:27:72.18:0,72,1804	0/0:31,0:30:66.22:0,66,1709	0/0:15,0:13:33.11:0,33,953
chr10	84503864	.	AGTGTGTGTCT	A	1922.05	PASS	AB=0.891;AC=9;AF=0.161;AN=56;BaseQRankSum=6.627;DP=965;FS=9.342;HRun=0;HaplotypeScore=279.4830;InbreedingCoeff=0.5628;MQ=47.68;MQ0=52;MQRankSum=-4.553;QD=10.17;ReadPosRankSum=-5.145;VQSLOD=0.3788;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:28.71:0,29,513	0/0:17,0:17:28.08:0,28,1007	0/0:35,0:3:5.99:0,6,118	0/0:46,0:9:18.43:0,18,359	0/0:23,0:23:51.16:0,51,1714	0/0:19,0:16:20.11:0,20,731	1/1:16,6:19:19.41:568,19,0	0/1:23,15:28:48.67:807,0,49	0/0:38,0:38:95.92:0,96,3419	0/0:47,0:39:93.32:0,93,3250	0/0:22,0:19:27.08:0,27,908	0/0:53,0:52:99:0,120,4050	0/0:35,0:34:93.32:0,93,3512	0/0:50,0:49:99:0,124,5000	0/0:42,0:32:53.75:0,54,2149	0/0:37,0:33:62.87:0,63,2427	0/0:32,0:27:48.34:0,48,1898	0/0:42,0:41:99:0,106,3506	0/1:16,0:4:9:118,0,9	1/1:11,2:13:6.42:106,6,0	0/1:86,4:73:75.17:75,0,128	0/0:40,0:40:99:0,108,3503	0/0:13,0:12:33.11:0,33,1085	0/0:60,0:56:99:0,148,6333	0/0:26,0:25:33.89:0,34,1238	0/0:44,0:37:93.31:0,93,3341	1/1:5,5:9:16.30:400,16,0	0/0:21,0:20:42.11:0,42,1616
chr10	84503874	.	T	TGA	806.85	PASS	AB=0.927;AC=7;AF=0.125;AN=56;BaseQRankSum=6.789;DP=932;FS=1.695;HRun=0;HaplotypeScore=174.2926;InbreedingCoeff=0.2298;MQ=47.97;MQ0=45;MQRankSum=-3.046;QD=5.07;ReadPosRankSum=-2.905;VQSLOD=2.9623;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:32.25:0,32,358	0/0:17,0:17:26.51:0,27,347	0/0:40,0:3:5.99:0,6,68	0/0:58,0:15:26.64:0,27,348	0/0:22,0:22:48.15:0,48,713	0/0:20,0:17:24.31:0,24,331	1/1:14,4:14:20.56:260,21,0	0/1:34,0:22:14.70:440,0,15	0/0:41,0:41:99:0,107,1497	0/0:46,0:39:99:0,102,1273	0/0:22,0:19:23.96:0,24,294	0/0:51,0:50:99:0,120,1755	0/0:37,0:36:99:0,99,1407	0/0:50,0:49:99:0,133,1889	0/0:37,0:27:50.62:0,51,731	0/0:31,0:26:56.58:0,57,739	0/0:28,0:23:56.17:0,56,730	0/0:38,0:37:99:0,99,1423	0/1:22,0:7:12.77:13,0,40	0/1:8,2:10:18.99:19,0,35	0/1:63,2:55:22.27:22,0,76	0/0:44,0:44:99:0,117,1758	0/0:13,0:12:36.08:0,36,485	0/0:63,0:59:99:0,165,2428	0/0:26,0:23:36.07:0,36,507	0/0:36,0:31:87.11:0,87,1136	0/1:8,2:9:6.16:187,0,6	0/0:18,0:17:42.09:0,42,572
chr10	84503895	.	CTGTG	C	403.63	PASS	AB=0.821;AC=2;AF=0.036;AN=56;BaseQRankSum=4.015;DP=941;FS=2.159;HRun=0;HaplotypeScore=200.8302;InbreedingCoeff=-0.0366;MQ=49.10;MQ0=40;MQRankSum=-4.058;QD=6.73;ReadPosRankSum=-4.139;VQSLOD=2.2617;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,20:33:26.07:478,0,26	0/0:10,0:10:16.48:0,16,178	0/0:66,0:14:23.48:0,23,617	0/0:91,0:23:41.98:0,42,839	0/0:24,0:24:63.17:0,63,1437	0/0:21,0:18:19.28:0,19,431	0/0:29,0:25:20.66:0,21,576	0/0:41,0:22:42.05:0,42,718	0/0:46,0:46:99:0,124,2775	0/0:28,0:22:45.07:0,45,660	0/0:15,0:13:9.01:0,9,133	0/0:50,0:50:99:0,120,3073	0/0:38,0:38:99:0,99,2412	0/0:43,0:42:99:0,102,2271	0/1:24,0:20:2.27:2,0,254	0/0:26,0:24:27.39:0,27,555	0/0:20,0:18:31.64:0,32,679	0/0:34,0:34:81.11:0,81,1895	0/0:26,0:12:24.08:0,24,514	0/0:7,0:7:5.77:0,6,100	0/0:78,0:70:43.80:0,44,1023	0/0:42,0:42:99:0,108,2649	0/0:20,0:19:42.12:0,42,920	0/0:62,0:60:99:0,150,3677	0/0:22,0:20:15.05:0,15,389	0/0:20,0:18:38.86:0,39,716	0/0:12,0:11:14.37:0,14,349	0/0:8,0:7:14.63:0,15,226
chr10	84503910	.	AGTGTCT	A	2587.37	PASS	AB=0.919;AC=20;AF=0.357;AN=56;BaseQRankSum=4.887;DP=889;FS=2.194;HRun=0;HaplotypeScore=197.4551;InbreedingCoeff=0.5891;MQ=48.02;MQ0=35;MQRankSum=-5.448;QD=12.20;ReadPosRankSum=-3.538;VQSLOD=2.4062;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:34:43.68:0,44,1214	1/1:6,1:6:11.87:170,12,0	0/0:67,0:16:25.93:0,26,508	0/0:101,0:22:24.22:0,24,830	0/0:23,0:23:51.08:0,51,1435	0/1:10,3:19:99:115,0,117	0/1:2,3:31:94.91:161,0,95	0/1:27,5:16:99:131,0,103	0/0:47,0:47:99:0,132,4125	1/1:9,11:15:32.94:708,33,0	1/1:4,7:10:6.02:106,6,0	0/0:54,0:54:99:0,147,4481	0/0:37,0:37:99:0,105,3064	0/0:38,1:37:99:0,108,3134	1/1:4,0:10:7:117,7,0	1/1:9,14:20:27:540,27,0	1/1:13,5:17:23.34:423,23,0	0/0:31,0:32:79.98:0,80,2483	0/0:8,0:8:7.13:0,7,239	0/0:6,1:10:8.94:0,9,70	0/0:40,6:72:40.66:0,41,777	0/0:41,0:41:99:0,105,2912	0/0:20,0:19:39.12:0,39,1173	0/0:53,0:51:99:0,126,3841	0/0:2,0:18:1.67:0,2,55	1/1:6,0:6:9:98,9,0	0/1:4,0:12:39.77:40,0,155	1/1:5,0:6:12.02:174,12,0
chr10	84503916	.	T	TGA	495.58	PASS	AB=0.900;AC=11;AF=0.196;AN=56;BaseQRankSum=5.251;DP=919;FS=6.372;HRun=0;HaplotypeScore=175.5194;InbreedingCoeff=0.3521;MQ=48.00;MQ0=33;MQRankSum=-1.984;QD=4.35;ReadPosRankSum=-4.908;VQSLOD=1.0420;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:35:48.10:0,48,699	0/1:7,1:7:11.67:60,0,12	0/0:69,0:17:33.76:0,34,392	0/0:102,0:25:49.13:0,49,588	0/0:24,0:24:54.09:0,54,744	0/0:21,0:19:29.39:0,29,281	0/0:37,0:34:29.28:0,29,233	0/0:37,0:19:43.78:0,44,580	0/0:50,0:50:99:0,135,1952	0/1:19,2:17:71.80:139,0,72	0/1:13,0:12:2.26:25,0,2	0/0:58,0:58:99:0,156,2274	0/0:38,0:38:99:0,105,1553	0/0:44,0:42:99:0,114,1606	1/1:16,0:12:5.44:27,5,0	0/1:21,3:20:28.44:107,0,28	0/1:16,5:18:42.85:251,0,43	0/0:33,0:33:89.28:0,89,1283	0/0:14,0:7:17.30:0,17,117	0/0:10,0:10:8.38:0,8,80	0/0:86,3:76:71.69:0,72,728	0/0:39,0:39:99:0,102,1484	0/0:19,0:18:35.92:0,36,550	0/0:54,0:51:99:0,132,1924	0/0:15,0:14:14.98:0,15,134	1/1:6,0:5:1.55:8,2,0	0/0:13,0:13:22.41:0,22,181	1/1:5,0:4:5.24:21,5,0
chr10	84503926	.	T	TGA	293.86	PASS	AB=0.847;AC=4;AF=0.071;AN=56;BaseQRankSum=5.356;DP=1049;FS=0.000;HRun=0;HaplotypeScore=201.9406;InbreedingCoeff=0.4267;MQ=47.19;MQ0=42;MQRankSum=-2.403;QD=9.80;ReadPosRankSum=-2.706;VQSLOD=2.6328;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:36:48.06:0,48,711	0/0:10,0:9:9.65:0,10,87	0/0:69,0:17:30.31:0,30,407	0/0:99,0:25:52.10:0,52,685	0/0:22,0:22:48.12:0,48,698	0/0:23,0:21:35.41:0,35,470	0/0:46,0:43:45.05:0,45,613	0/0:49,0:29:81.13:0,81,1162	0/0:51,0:50:99:0,141,2108	0/0:36,0:31:70.73:0,71,849	0/0:17,0:16:4.96:0,5,23	0/0:59,0:59:99:0,162,2380	0/0:43,0:42:99:0,120,1694	0/0:43,0:41:99:0,111,1636	0/1:15,2:14:6.33:125,0,6	0/0:29,1:26:32.66:0,33,471	0/0:22,1:19:38.92:0,39,437	0/0:35,1:36:43.65:0,44,1317	0/0:22,0:11:27.09:0,27,395	0/0:14,0:13:9.02:0,9,132	0/0:127,1:105:95.96:0,96,1437	0/0:42,0:42:99:0,105,1419	0/0:20,0:19:38.91:0,39,569	0/0:58,1:53:99:0,138,2051	0/0:20,0:19:18.02:0,18,253	0/1:6,2:6:59.31:139,0,59	0/0:17,0:17:31.52:0,32,470	1/1:4,1:4:8.84:137,9,0
chr10	84503934	.	T	TGC	396.45	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=5.879;DP=1099;FS=0.930;HRun=0;HaplotypeScore=206.8125;InbreedingCoeff=0.7014;MQ=46.81;MQ0=48;MQRankSum=-1.799;QD=10.17;ReadPosRankSum=-2.228;VQSLOD=2.9537;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,1:38:52.79:0,53,799	0/0:9,0:8:11.76:0,12,113	0/0:62,0:13:32.10:0,32,383	0/0:84,0:18:40.79:0,41,596	0/0:23,0:23:51.09:0,51,757	0/0:24,0:23:40.31:0,40,549	0/0:50,0:47:58.78:0,59,752	0/0:53,0:34:98.85:0,99,1358	0/0:51,0:50:99:0,141,2232	0/0:43,0:36:91.21:0,91,933	0/0:21,0:20:11.91:0,12,92	0/0:62,0:62:99:0,162,2506	0/0:41,0:40:99:0,114,1760	0/0:47,0:45:99:0,120,1808	1/1:22,1:19:11:201,11,0	0/0:35,0:31:41.53:0,42,570	0/0:21,1:18:41.86:0,42,429	0/0:37,0:36:85.42:0,85,1438	0/0:24,0:11:33.06:0,33,460	0/0:17,0:15:13.26:0,13,167	0/0:137,9:118:99:0,115,1651	0/0:38,0:37:90.17:0,90,1332	0/0:23,0:22:45.02:0,45,651	0/0:63,0:56:99:0,153,2266	0/0:22,0:20:26.98:0,27,338	0/1:12,0:9:48.06:176,0,48	0/0:19,0:18:34.98:0,35,519	1/1:4,0:3:9.03:137,9,0
chr10	84504068	.	AGT	A	848.77	PASS	AB=0.816;AC=2;AF=0.036;AN=56;BaseQRankSum=3.119;DP=1429;FS=1.373;HRun=0;HaplotypeScore=291.5960;InbreedingCoeff=-0.0434;MQ=43.92;MQ0=119;MQRankSum=2.406;QD=7.93;ReadPosRankSum=-1.753;VQSLOD=2.3705;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:32,30:49:36.86:922,0,37	0/0:28,0:22:38.08:0,38,514	0/0:43,0:15:26.25:0,26,439	0/0:27,0:6:5.39:0,5,117	0/0:23,0:19:20.78:0,21,292	0/0:20,0:15:15.45:0,15,179	0/0:73,0:53:83.92:0,84,1363	0/0:42,0:29:83.57:0,84,1269	0/0:64,0:64:99:0,172,2898	0/0:76,1:47:99:0,123,2016	0/0:34,0:21:18.06:0,18,305	0/0:68,0:66:99:0,156,2613	0/0:40,0:37:99:0,99,1621	0/0:49,0:47:98.92:0,99,1681	0/1:43,2:36:8.30:8,0,505	0/0:46,0:38:46.83:0,47,863	0/0:62,1:55:94.91:0,95,1723	0/0:45,0:40:99:0,103,1606	0/0:22,0:14:36.12:0,36,621	0/0:38,0:27:36.01:0,36,582	0/0:224,0:160:99:0,244,4074	0/0:48,0:44:58.09:0,58,868	0/0:15,0:12:8.43:0,8,157	0/0:71,0:63:99:0,129,2484	0/0:47,0:37:40.42:0,40,618	0/0:62,3:45:27.28:0,27,1658	0/0:37,0:28:51.93:0,52,866	0/0:13,0:10:12.04:0,12,183
chr10	84504101	.	CTG	C	773.89	PASS	AB=0.722;AC=3;AF=0.054;AN=56;BaseQRankSum=2.055;DP=1553;DS;FS=1.500;HRun=0;HaplotypeScore=284.0760;InbreedingCoeff=-0.0216;MQ=38.99;MQ0=226;MQRankSum=-3.257;QD=6.97;ReadPosRankSum=0.013;VQSLOD=3.0550;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:46:74.10:0,74,1167	0/0:31,0:22:36.71:0,37,476	0/0:45,0:1:2.88:0,3,15	0/0:43,0:2:2.50:0,2,9	0/0:22,0:15:15.52:0,16,238	0/0:28,0:19:21.12:0,21,238	0/0:74,0:52:72.27:0,72,1276	0/0:70,1:34:66.21:0,66,1083	0/0:62,0:61:99:0,148,2444	0/0:81,0:45:92.54:0,93,1438	0/0:42,0:28:21.48:0,21,300	0/0:64,0:61:99:0,132,2189	0/0:44,0:42:90.26:0,90,1481	0/0:41,0:37:86.94:0,87,1417	0/1:20,24:33:99:218,0,156	0/0:45,0:36:47.54:0,48,678	0/0:66,0:58:99:0,108,1781	0/0:50,0:45:99:0,126,2102	0/0:41,0:13:30.10:0,30,487	0/0:51,0:37:45.14:0,45,755	0/0:246,1:183:99:0,251,4327	0/0:50,1:44:68.20:0,68,1069	0/0:23,0:18:23.86:0,24,388	0/0:74,0:65:99:0,153,2567	0/0:50,0:37:42.01:0,42,587	0/1:38,19:36:99:586,0,360	0/0:35,0:25:49.39:0,49,794	0/1:7,3:8:29.64:70,0,30
chr10	84504140	.	A	AGT	9653.81	PASS	AB=0.880;AC=30;AF=0.536;AN=56;BaseQRankSum=-6.616;DP=1173;DS;FS=0.000;HRun=0;HaplotypeScore=215.7068;InbreedingCoeff=0.6791;MQ=44.33;MQ0=73;MQRankSum=1.184;QD=15.52;ReadPosRankSum=-1.130;VQSLOD=4.2564;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,26:47:58.12:1278,58,0	1/1:3,7:9:21.04:336,21,0	0/0:53,0:11:7.37:0,7,151	0/0:86,0:10:15.76:0,16,153	0/0:29,1:26:45.78:0,46,590	1/1:3,27:28:23.90:349,24,0	1/1:10,34:38:28.96:516,29,0	0/1:13,3:14:97.63:145,0,98	0/0:63,0:62:99:0,132,1677	0/1:34,13:37:58.09:786,0,58	1/1:17,13:25:17.26:294,17,0	0/0:47,0:46:93.16:0,93,1236	0/0:40,0:39:78.12:0,78,985	0/0:47,0:47:93.12:0,93,1209	1/1:10,4:15:2.99:23,3,0	1/1:11,16:22:30.45:511,30,0	1/1:15,15:27:57.15:922,57,0	0/0:44,0:46:34.89:0,35,1135	1/1:9,3:6:14.74:190,15,0	1/1:7,31:35:29.26:524,29,0	1/1:90,68:127:99:2921,179,0	0/0:46,0:42:72.05:0,72,899	0/0:24,0:21:47.94:0,48,598	0/0:66,0:61:99:0,135,1746	1/1:13,26:33:15.74:360,16,0	0/1:18,3:13:41.15:45,0,41	1/1:10,8:15:27.47:381,27,0	0/1:8,0:8:8.03:73,0,8
chr10	84504158	.	TGA	T	110.95	PASS	AB=0.912;AC=7;AF=0.125;AN=56;BaseQRankSum=5.844;DP=1244;DS;FS=10.440;HRun=0;HaplotypeScore=252.7457;InbreedingCoeff=0.1373;MQ=46.35;MQ0=56;MQRankSum=-4.252;QD=0.62;ReadPosRankSum=-3.591;VQSLOD=0.7768;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:50:83:0,83,1498	0/0:15,0:15:39.07:0,39,680	0/1:52,0:12:0.24:0,0,254	0/0:87,1:12:15.29:0,15,152	0/0:32,0:30:55.93:0,56,978	0/0:38,1:35:20.77:0,21,367	0/0:47,0:42:46.54:0,47,911	0/0:34,0:22:11.88:0,12,715	0/0:61,0:59:99:0,129,2320	0/0:66,0:57:99:0,162,2936	0/0:35,0:33:33.31:0,33,582	0/0:52,0:51:99:0,108,1992	0/0:41,0:39:96.30:0,96,1722	0/0:48,0:48:99:0,102,1906	1/1:12,12:15:3.01:46,3,0	0/0:29,0:26:40.68:0,41,722	0/0:27,0:25:65.59:0,66,1055	0/1:36,3:39:36.31:36,0,1463	0/1:26,0:11:1.37:1,0,356	0/0:42,0:39:60.16:0,60,1134	0/0:162,0:137:99:0,241,4503	0/0:46,0:45:93.41:0,93,1714	0/0:34,0:31:74.05:0,74,1321	0/0:58,0:57:99:0,138,2493	0/0:32,0:27:45.02:0,45,795	0/1:22,4:15:66.09:66,0,365	0/0:18,0:15:26.41:0,26,483	0/1:9,4:10:73.40:73,0,148
chr10	84504265	.	C	CTG	16673.32	PASS	AB=0.885;AC=39;AF=0.696;AN=56;BaseQRankSum=-2.105;DP=1072;FS=0.000;HRun=0;HaplotypeScore=271.9062;InbreedingCoeff=0.3652;MQ=49.48;MQ0=26;MQRankSum=-2.515;QD=19.06;ReadPosRankSum=-1.656;VQSLOD=4.2095;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,36:49:91.29:1470,91,0	1/1:1,11:12:15.05:255,15,0	0/0:43,0:14:11.40:0,11,120	0/0:72,0:33:0.33:0,0,340	0/0:24,1:25:31.91:0,32,495	1/1:3,13:15:30.10:493,30,0	1/1:12,26:38:26.42:1021,26,0	1/1:24,14:31:51.16:789,51,0	0/1:59,5:63:38.60:39,0,1443	1/1:17,27:41:96.20:1528,96,0	1/1:1,14:15:24.08:412,24,0	0/1:46,7:52:99:190,0,986	0/1:41,8:48:99:269,0,1011	0/1:38,4:41:46.77:47,0,666	1/1:5,29:32:50.70:866,51,0	1/1:10,26:31:63.22:1070,63,0	1/1:4,26:28:66.22:1118,66,0	0/1:22,3:25:99:103,0,463	0/1:13,4:9:2.24:255,0,2	1/1:7,13:19:33.11:558,33,0	1/1:45,95:130:99:3069,185,0	0/0:35,0:35:78.20:0,78,1020	0/0:21,0:21:35.14:0,35,486	0/1:52,6:55:20.60:21,0,800	1/1:4,12:16:39.11:633,39,0	1/1:13,29:37:84.21:1522,84,0	1/1:7,23:27:48.15:793,48,0	1/1:4,2:5:8.90:154,9,0
chr10	84504407	.	GTGT	G	1489.34	PASS	AB=1.000;AC=38;AF=0.760;AN=50;BaseQRankSum=2.611;DP=504;FS=30.363;HRun=0;HaplotypeScore=207.5689;InbreedingCoeff=0.2836;MQ=44.95;MQ0=23;MQRankSum=1.862;QD=4.80;ReadPosRankSum=1.715;VQSLOD=1.3095;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:10:4.88:24,5,0	1/1:6,0:5:5.75:47,6,0	0/0:92,0:20:40.32:0,40,583	0/0:86,0:17:29.69:0,30,413	./.	1/1:11,0:10:1.75:16,2,0	./.	0/0:6,0:2:0.64:0,1,16	1/1:30,3:32:1:147,1,0	1/1:8,0:4:8.81:79,9,0	0/0:4,0:4:0.68:0,1,2	1/1:26,4:29:20.17:267,20,0	1/1:26,1:24:13.13:205,13,0	1/1:22,1:22:1.06:70,1,0	1/1:13,2:15:1.48:16,1,0	1/1:18,1:15:11.88:89,12,0	0/1:4,0:4:1.07:47,0,1	0/1:8,0:8:38.27:82,0,38	1/1:7,0:7:17.64:206,18,0	./.	1/1:51,1:51:10.65:61,11,0	1/1:11,0:11:1.53:4,2,0	1/1:7,0:7:3.40:18,3,0	0/1:17,0:13:0.29:0,0,0	1/1:3,0:3:4.15:14,4,0	1/1:4,0:2:6.02:77,6,0	1/1:8,0:6:12.81:124,13,0	0/1:4,0:4:25.34:31,0,25
chr10	84504409	.	GT	G	2475.57	PASS	AB=0.649;AC=38;AF=0.760;AN=50;BaseQRankSum=3.551;DP=509;FS=13.107;HRun=1;HaplotypeScore=199.9080;InbreedingCoeff=0.3967;MQ=44.73;MQ0=24;MQRankSum=0.831;QD=8.28;ReadPosRankSum=2.986;VQSLOD=-0.3244;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,4:10:3.92:38,0,4	1/1:0,6:5:3.01:40,3,0	0/0:93,0:20:40.10:0,40,496	0/0:89,0:17:27.97:0,28,347	./.	0/1:4,7:10:1.26:1,0,9	./.	0/1:4,2:2:3.53:4,0,9	1/1:8,25:32:32.19:341,32,0	1/1:2,6:4:8.97:86,9,0	0/0:0,4:4:0.58:0,1,2	1/1:5,25:29:34.65:343,35,0	1/1:5,22:24:45.09:484,45,0	1/1:3,20:22:23.57:267,24,0	1/1:4,11:15:1.80:39,2,0	1/1:3,16:15:18.87:182,19,0	0/1:0,4:4:2.12:60,0,2	1/1:3,5:8:8.80:97,9,0	1/1:1,6:7:17.84:197,18,0	./.	1/1:26,27:51:9.09:65,9,0	1/1:1,10:11:3:38,3,0	1/1:1,6:7:3.37:17,3,0	0/0:6,11:13:0.20:0,0,1	1/1:1,3:3:5.69:49,6,0	1/1:0,4:2:6.02:77,6,0	1/1:0,8:6:12.92:145,13,0	1/1:2,2:4:4.26:40,4,0
chr10	84504410	.	TC	T	1635.91	PASS	AB=0.964;AC=40;AF=0.800;AN=50;BaseQRankSum=3.860;DP=507;FS=11.004;HRun=1;HaplotypeScore=202.1309;InbreedingCoeff=0.4043;MQ=44.78;MQ0=24;MQRankSum=0.373;QD=5.21;ReadPosRankSum=3.437;VQSLOD=-0.5327;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,1:10:3.97:20,0,4	1/1:6,0:5:2.96:19,3,0	0/0:92,1:20:42.69:0,43,510	0/0:89,1:17:12.15:0,12,343	./.	0/1:11,0:10:1.26:1,0,9	./.	1/1:5,0:1:3:29,3,0	1/1:32,1:32:32.44:239,32,0	1/1:7,1:4:8.90:70,9,0	0/0:4,0:4:0.58:0,1,2	1/1:30,0:29:33.26:188,33,0	1/1:26,1:24:43.66:317,44,0	1/1:23,0:22:24.27:171,24,0	1/1:15,0:15:1.87:21,2,0	1/1:19,0:15:18.70:117,19,0	0/1:4,0:4:2.18:38,0,2	1/1:7,0:8:17.26:98,17,0	1/1:6,1:7:17.91:164,18,0	./.	1/1:40,5:51:8.55:57,9,0	1/1:11,0:11:2.52:21,3,0	1/1:7,0:7:2.69:8,3,0	0/1:15,0:12:0.10:0,0,0	1/1:3,0:3:4.78:25,5,0	1/1:4,0:2:5.83:34,6,0	1/1:8,0:6:12.76:85,13,0	1/1:3,1:4:5.94:42,6,0
chr10	84504411	.	CG	C	3052.09	PASS	AB=0.844;AC=41;AF=0.820;AN=50;BaseQRankSum=2.725;DP=511;FS=14.736;HRun=1;HaplotypeScore=197.7674;InbreedingCoeff=0.4213;MQ=46.05;MQ0=24;MQRankSum=0.572;QD=9.66;ReadPosRankSum=3.338;VQSLOD=-0.0084;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,6:10:3.16:44,3,0	1/1:6,0:5:3.01:38,3,0	0/0:93,0:20:44.15:0,44,526	0/0:90,0:19:25.32:0,25,369	./.	0/1:7,4:10:1.77:2,0,9	./.	1/1:2,2:1:2.98:22,3,0	1/1:29,4:32:38.98:451,39,0	1/1:7,1:4:8.70:91,9,0	0/0:4,0:4:0.58:0,1,2	1/1:29,1:29:35.79:373,36,0	1/1:24,3:24:45.22:535,45,0	1/1:21,2:22:26.82:328,27,0	1/1:13,2:15:1.91:40,2,0	1/1:17,2:15:23.03:245,23,0	0/1:4,0:4:2.11:76,0,2	1/1:6,2:8:18.05:224,18,0	1/1:7,0:7:18.04:209,18,0	./.	1/1:41,11:51:4.17:88,4,0	1/1:11,1:12:2.97:40,3,0	1/1:7,0:7:3.41:19,3,0	0/1:12,4:12:0.10:0,0,0	1/1:4,0:3:4.56:43,5,0	1/1:5,0:2:6.02:77,6,0	1/1:8,0:6:12.92:152,13,0	1/1:3,1:4:6.02:81,6,0
chr10	84504426	.	TGAG	T	924.67	PASS	AB=0.826;AC=23;AF=0.411;AN=56;BaseQRankSum=5.645;DP=653;FS=3.458;HRun=0;HaplotypeScore=258.3388;InbreedingCoeff=-0.2106;MQ=51.95;MQ0=12;MQRankSum=-2.515;QD=2.11;ReadPosRankSum=-4.817;VQSLOD=1.6104;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,1:17:14.75:86,15,0	0/1:5,0:5:6.58:7,0,51	0/0:59,0:18:30.87:0,31,470	0/0:79,0:25:26.74:0,27,512	0/0:4,0:2:1.63:0,2,68	1/1:14,2:15:5.96:30,6,0	0/0:9,0:9:5.84:0,6,52	0/0:16,0:10:30.09:0,30,411	0/1:35,11:44:99:201,0,631	0/1:13,1:7:21.69:22,0,188	0/0:7,1:6:1.86:0,2,72	0/1:36,10:41:99:191,0,444	0/1:32,3:30:52:52,0,689	0/1:30,8:32:54.54:55,0,512	0/1:13,7:21:37.70:38,0,44	0/1:22,7:25:99:122,0,313	0/1:5,2:7:14.49:14,0,172	0/1:8,2:11:77.71:78,0,193	0/0:10,0:10:23.66:0,24,409	0/0:8,0:7:3.01:0,3,73	0/1:57,0:60:37.53:38,0,190	0/1:20,4:19:4.67:5,0,52	1/1:7,1:7:4.56:41,5,0	1/1:20,1:19:1.19:4,1,0	0/1:6,0:5:0.22:0,0,55	0/1:4,2:3:32.16:32,0,120	0/0:17,0:14:17.09:0,17,293	0/1:4,2:5:15.83:67,0,16
chr10	84504435	.	G	GC	6962.72	PASS	AB=0.949;AC=50;AF=0.893;AN=56;BaseQRankSum=-1.503;DP=845;FS=31.839;HRun=1;HaplotypeScore=311.0726;InbreedingCoeff=0.4107;MQ=49.73;MQ0=10;MQRankSum=-1.239;QD=8.87;ReadPosRankSum=4.063;VQSLOD=0.7195;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,21:24:11.09:105,11,0	1/1:3,6:8:7.36:99,7,0	0/0:40,0:16:20.29:0,20,229	0/1:63,1:24:1.37:1,0,193	1/1:5,9:10:3.48:46,3,0	1/1:7,15:23:8.82:104,9,0	0/0:10,5:14:4.95:0,5,27	0/1:19,1:14:13.03:13,0,71	1/1:9,40:55:83.90:906,84,0	1/1:12,11:18:34.62:353,35,0	1/1:3,9:12:1.56:43,2,0	1/1:7,42:52:61.93:662,62,0	1/1:11,33:43:68.32:909,68,0	1/1:4,33:40:49.51:605,50,0	1/1:6,17:30:8.50:168,9,0	1/1:4,28:40:51.85:554,52,0	1/1:3,8:13:16.11:289,16,0	1/1:5,10:19:41.90:495,42,0	1/1:7,8:15:21.03:318,21,0	1/1:3,6:8:3.01:45,3,0	1/1:20,46:67:18.65:203,19,0	1/1:12,25:35:11.82:152,12,0	1/1:6,8:13:6.23:40,6,0	1/1:12,18:30:11.79:156,12,0	1/1:4,5:9:6:68,6,0	1/1:12,6:16:31.38:307,31,0	1/1:7,15:19:1.85:230,2,0	1/1:2,2:5:8.99:92,9,0
chr10	84504437	.	TGAG	T	850.35	PASS	AB=0.870;AC=8;AF=0.143;AN=56;BaseQRankSum=5.152;DP=890;FS=6.390;HRun=0;HaplotypeScore=344.3373;InbreedingCoeff=0.0369;MQ=49.52;MQ0=11;MQRankSum=-3.293;QD=4.29;ReadPosRankSum=-3.764;VQSLOD=0.9378;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:27:4.44:0,4,122	0/0:10,0:9:8.09:0,8,265	0/0:41,0:15:29.35:0,29,394	0/0:64,0:25:4.34:0,4,337	0/0:15,0:11:1.56:0,2,59	0/0:28,0:25:34.05:0,34,295	1/1:12,5:15:11.01:136,11,0	0/1:13,13:18:99:504,0,345	0/0:64,0:56:34.55:0,35,883	0/0:28,0:19:38.93:0,39,672	0/0:16,0:14:6.58:0,7,87	0/0:61,0:53:13.46:0,13,595	0/0:49,0:43:29.67:0,30,968	0/0:48,0:41:54.01:0,54,793	0/0:33,0:31:8.28:0,8,236	0/0:49,0:43:34.23:0,34,836	0/0:14,0:13:29.05:0,29,397	0/1:20,0:20:23.61:24,0,413	0/1:18,3:17:99:170,0,481	0/1:10,1:9:10.89:11,0,102	0/1:72,8:74:46.71:47,0,398	0/0:44,0:38:12.43:0,12,245	0/0:15,0:13:0.17:0,0,3	0/0:40,0:33:15.32:0,15,318	0/0:11,0:9:8.59:0,9,198	0/0:22,0:17:45.39:0,45,725	0/1:19,4:19:92.92:93,0,249	0/0:6,0:5:7.16:0,7,68
chr10	84505254	.	CA	C	1051.76	PASS	AB=0.888;AC=25;AF=0.446;AN=56;BaseQRankSum=3.945;DP=345;FS=14.734;HRun=12;HaplotypeScore=52.5431;InbreedingCoeff=0.7101;MQ=69.00;MQ0=13;MQRankSum=-2.933;QD=7.11;ReadPosRankSum=0.627;VQSLOD=0.5636;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:16:33.04:0,33,339	1/1:2,1:3:5.90:41,6,0	0/0:27,0:15:6.30:0,6,84	0/1:24,0:5:2.98:3,0,29	0/0:17,0:17:0.82:0,1,281	1/1:3,4:7:20.85:159,21,0	1/1:4,0:3:5.99:49,6,0	0/1:18,1:18:2.77:3,0,85	0/0:9,0:9:21.05:0,21,224	1/1:4,9:13:23.96:196,24,0	1/1:3,8:10:17.96:146,18,0	0/0:4,0:4:12.03:0,12,128	0/0:11,0:10:21.04:0,21,213	0/0:5,0:5:12.01:0,12,113	0/0:7,0:7:18.04:0,18,190	1/1:1,3:4:3.46:26,3,0	1/1:6,8:12:19.94:150,20,0	0/0:29,1:28:30.86:0,31,534	1/1:12,1:8:20.19:131,20,0	1/1:7,1:8:13.35:84,13,0	1/1:6,0:4:8.99:73,9,0	0/0:6,0:7:17.88:0,18,173	0/0:8,0:9:26.89:0,27,258	0/0:25,0:25:57.09:0,57,586	1/1:3,8:9:11.99:98,12,0	0/0:24,1:24:30.97:0,31,539	0/1:6,4:8:1.16:92,0,1	0/0:3,0:2:2.98:0,3,21
chr10	84505585	.	C	CA	1241.32	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-3.675;DP=360;FS=8.278;HRun=8;HaplotypeScore=34.1881;InbreedingCoeff=0.7793;MQ=66.57;MQ0=7;MQRankSum=2.591;QD=17.99;ReadPosRankSum=0.302;VQSLOD=2.3893;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:75.03:0,75,686	1/1:0,4:4:12.04:138,12,0	0/0:22,0:10:2.26:0,2,96	0/1:19,0:8:21.40:21,0,42	0/0:10,0:10:27.01:0,27,247	0/0:13,0:13:21.52:0,22,283	0/0:7,0:7:14.98:0,15,132	0/0:18,1:18:10.39:0,10,349	0/0:9,0:9:27.01:0,27,247	1/1:1,11:12:33.08:371,33,0	1/1:1,13:14:39.07:432,39,0	0/0:12,0:12:32.97:0,33,294	0/0:8,0:8:24.01:0,24,220	0/0:9,0:9:27.01:0,27,247	0/0:8,0:8:24.01:0,24,220	1/1:0,3:3:9.03:104,9,0	1/1:3,14:17:30.09:346,30,0	0/0:24,0:23:39.72:0,40,427	0/0:14,0:12:33.02:0,33,302	0/0:5,0:5:15.01:0,15,137	0/0:26,0:26:66.02:0,66,602	0/0:3,0:3:3:0,3,27	0/0:10,0:10:27.01:0,27,247	0/0:12,0:12:33.01:0,33,302	0/0:10,0:10:27.01:0,27,247	0/0:15,0:14:33.02:0,33,302	0/0:12,0:12:35.97:0,36,321	0/0:11,0:11:33.02:0,33,302
chr10	84505681	.	GA	G	1022.14	PASS	AB=0.827;AC=19;AF=0.339;AN=56;BaseQRankSum=2.492;DP=405;FS=0.000;HRun=14;HaplotypeScore=52.8995;InbreedingCoeff=0.4615;MQ=60.58;MQ0=13;MQRankSum=-0.533;QD=5.68;ReadPosRankSum=2.358;VQSLOD=1.8163;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,3:28:38.52:155,39,0	0/0:2,0:3:2.84:0,3,14	0/0:22,0:5:0.26:0,0,34	0/0:15,0:3:7.83:0,8,37	0/0:9,0:11:17.88:0,18,168	1/1:4,0:15:20.14:58,20,0	1/1:11,4:17:20.92:120,21,0	1/1:11,10:20:7.97:196,8,0	0/0:12,0:13:32.86:0,33,289	0/0:6,0:14:28.48:0,28,173	0/0:4,0:3:0.89:0,1,2	0/0:14,0:14:30.35:0,30,257	0/0:15,0:16:35.81:0,36,306	0/0:16,1:16:24.38:0,24,357	1/1:2,9:12:25.80:170,26,0	0/0:4,0:11:27.41:0,27,153	0/0:17,0:23:57.22:0,57,327	0/0:23,1:23:17.52:0,18,283	0/1:7,12:20:6.84:187,0,7	0/1:8,1:8:27.67:64,0,28	0/1:12,2:14:40.30:40,0,55	0/1:3,1:4:8.56:9,0,71	0/0:7,1:9:0.27:0,0,131	0/0:16,0:17:34.27:0,34,283	1/1:8,1:6:8.60:36,9,0	0/0:9,1:9:3.34:0,3,162	1/1:3,17:21:22.86:150,23,0	0/1:6,0:6:22.49:22,0,93
chr10	84506003	.	G	GT	2741.17	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.161;DP=652;FS=3.689;HRun=2;HaplotypeScore=60.1372;InbreedingCoeff=0.9985;MQ=74.98;MQ0=0;MQRankSum=-1.319;QD=35.60;ReadPosRankSum=1.612;VQSLOD=4.2588;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1211	0/0:8,0:8:21.07:0,21,260	0/0:24,0:24:63.14:0,63,743	0/0:23,0:22:60:0,60,699	0/0:35,0:35:99:0,102,1250	0/0:24,0:24:66.21:0,66,818	0/0:19,0:19:57.18:0,57,706	0/0:26,0:26:72.18:0,72,875	0/0:22,0:22:66.19:0,66,804	0/0:27,0:27:75.23:0,75,930	0/0:17,0:17:42.13:0,42,520	0/0:29,0:29:87.27:0,87,1078	0/0:16,0:16:48.15:0,48,594	0/0:18,0:18:54.17:0,54,668	1/1:2,24:26:60.20:864,60,0	0/0:26,0:26:72.23:0,72,892	0/0:23,0:23:66.18:0,66,803	0/0:25,0:25:72.18:0,72,875	0/0:20,0:20:57.18:0,57,706	0/0:21,0:21:60.19:0,60,743	0/0:18,0:18:42.11:0,42,506	0/0:26,0:26:78.25:0,78,967	0/0:25,0:25:72.23:0,72,892	0/0:23,0:23:69.20:0,69,843	0/0:26,0:26:75.09:0,75,929	1/1:1,30:31:90.30:1295,90,0	0/0:20,0:20:60.19:0,60,743	1/1:0,20:20:51.17:725,51,0
chr10	84506689	.	C	CTG	335.76	PASS	AC=18;AF=0.818;AN=22;BaseQRankSum=-2.293;DP=27;FS=2.808;HRun=0;HaplotypeScore=9.6125;InbreedingCoeff=0.2374;MQ=66.83;MQ0=1;MQRankSum=-0.085;QD=18.65;ReadPosRankSum=-2.123;VQSLOD=2.1762;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:9.02:119,9,0	./.	./.	0/0:2,0:1:3.01:0,3,48	./.	./.	1/1:2,0:2:3.01:38,3,0	./.	1/1:0,2:3:3.01:34,3,0	./.	./.	1/1:1,0:1:2.94:18,3,0	./.	./.	./.	1/1:1,0:1:2.99:24,3,0	0/0:2,1:3:2.22:0,2,7	./.	./.	./.	1/1:3,0:3:9:90,9,0	1/1:1,0:1:3.01:50,3,0	./.	./.	./.	1/1:1,0:1:3:26,3,0	1/1:1,0:1:2.99:24,3,0	./.
chr10	84508025	.	TTTTTG	T	938.26	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=1.840;DP=392;FS=4.559;HRun=0;HaplotypeScore=88.0128;InbreedingCoeff=0.9526;MQ=64.81;MQ0=8;MQRankSum=-0.449;QD=26.81;ReadPosRankSum=1.793;VQSLOD=3.2918;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:8.94:129,9,0	0/0:11,0:11:27.09:0,27,748	0/0:42,0:21:25.70:0,26,404	0/0:41,0:20:32.05:0,32,300	0/0:18,0:18:45.15:0,45,1215	0/0:16,0:16:42.11:0,42,1058	0/0:8,0:8:24.04:0,24,597	0/0:26,0:26:45.10:0,45,870	0/0:11,0:11:24.08:0,24,634	0/0:10,0:10:30.10:0,30,840	0/0:17,0:17:45.15:0,45,1219	0/0:12,0:12:30.01:0,30,588	0/0:8,0:8:18.05:0,18,393	0/0:9,0:9:18.05:0,18,428	1/1:0,8:8:12.04:220,12,0	0/0:10,0:10:23.98:0,24,542	0/0:21,0:21:51.14:0,51,1329	0/0:11,0:10:24.03:0,24,578	0/0:14,0:13:30.09:0,30,681	0/0:13,0:13:24.07:0,24,577	0/0:9,0:9:21.98:0,22,665	0/0:11,0:11:30.10:0,30,750	0/0:6,0:6:18.06:0,18,471	0/0:14,0:14:36.08:0,36,847	0/0:10,0:10:27.06:0,27,618	1/1:0,6:6:11.98:190,12,0	0/0:9,0:9:24.07:0,24,513	1/1:1,11:11:30.10:549,30,0
chr10	84509228	.	CT	C	1301.51	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.826;DP=650;FS=1.354;HRun=2;HaplotypeScore=75.2408;InbreedingCoeff=0.9611;MQ=83.58;MQ0=1;MQRankSum=-10.362;QD=27.11;ReadPosRankSum=1.269;VQSLOD=3.3599;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,2041	0/0:9,0:9:27.09:0,27,403	0/0:20,0:20:60.15:0,60,808	0/0:22,0:22:63.19:0,63,863	0/0:16,0:16:48.15:0,48,699	0/0:21,0:21:63.20:0,63,919	0/0:19,0:19:57.15:0,57,827	0/0:28,0:28:72.24:0,72,1060	0/0:19,0:19:57.19:0,57,854	0/0:42,0:42:99:0,126,1835	0/0:13,0:13:36.12:0,36,538	0/0:30,0:30:87.28:0,87,1285	0/0:21,0:21:63.21:0,63,944	0/0:17,0:17:48.15:0,48,699	1/1:1,18:18:47.93:524,48,0	0/0:19,0:19:54.18:0,54,809	0/0:35,0:35:78.24:0,78,1144	0/0:27,0:27:81.23:0,81,1189	0/0:20,0:20:60.17:0,60,841	0/0:18,0:18:54.16:0,54,768	0/0:36,0:36:99:0,99,1451	0/0:17,0:17:51.17:0,51,763	0/0:18,0:18:54.17:0,54,786	0/0:37,0:36:99:0,105,1507	0/0:24,0:24:72.24:0,72,1079	1/1:2,25:26:70.98:839,71,0	0/0:27,0:27:81.25:0,81,1175	1/1:0,2:2:6.02:73,6,0
chr10	84509232	.	AAAC	A	2118.73	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.438;DP=662;FS=0.614;HRun=0;HaplotypeScore=101.8100;InbreedingCoeff=0.9607;MQ=82.80;MQ0=1;MQRankSum=-10.402;QD=44.14;ReadPosRankSum=1.560;VQSLOD=5.3614;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,3370	0/0:9,0:9:24.08:0,24,575	0/0:19,0:19:53.77:0,54,1225	0/0:23,0:23:63.68:0,64,1475	0/0:16,0:16:48.16:0,48,1180	0/0:21,0:21:63.22:0,63,1528	0/0:21,0:21:63.21:0,63,1456	0/0:29,0:29:75.24:0,75,1735	0/0:20,0:20:60.21:0,60,1479	0/0:42,0:42:99:0,126,3071	0/0:13,0:13:36.12:0,36,883	0/0:30,0:30:90.31:0,90,2204	0/0:23,0:23:69.24:0,69,1665	0/0:17,0:17:51.18:0,51,1243	1/1:1,18:18:48.16:835,48,0	0/0:20,0:20:54.19:0,54,1332	0/0:36,0:36:81.28:0,81,1919	0/0:26,0:26:78.27:0,78,1896	0/0:22,0:22:66.23:0,66,1562	0/0:18,0:18:54.19:0,54,1331	0/0:42,0:42:99:0,114,2720	0/0:16,0:16:48.16:0,48,1180	0/0:18,0:18:54.19:0,54,1329	0/0:36,0:35:99:0,102,2443	0/0:24,0:24:72.25:0,72,1710	1/1:2,25:26:75.26:1311,75,0	0/0:25,0:25:75.26:0,75,1849	1/1:0,2:2:6.02:107,6,0
chr10	84509310	.	ACACGCACG	A	2954.73	PASS	AB=0.900;AC=15;AF=0.268;AN=56;BaseQRankSum=9.965;DP=810;FS=50.869;HRun=0;HaplotypeScore=242.5193;InbreedingCoeff=0.2845;MQ=57.83;MQ0=10;MQRankSum=-7.907;QD=9.53;ReadPosRankSum=1.188;VQSLOD=1.3117;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,105,2660	1/1:2,5:7:6.02:108,6,0	0/1:27,0:16:15.99:16,0,122	0/1:26,0:20:91.10:91,0,230	0/0:19,0:19:36:0,36,913	0/1:28,0:28:2.11:2,0,43	0/0:46,0:44:19.30:0,19,724	0/0:27,0:27:62.65:0,63,792	0/0:28,0:27:72.19:0,72,2005	1/1:14,21:35:66.15:1152,66,0	0/1:6,14:20:2.57:9,0,3	0/0:29,0:29:72.23:0,72,2015	0/0:21,0:21:57.18:0,57,1555	0/0:32,0:32:81.27:0,81,2465	0/1:18,0:18:55.16:224,0,55	1/1:7,26:33:33.11:756,33,0	0/1:10,39:49:0.03:264,0,0	0/0:39,0:39:99:0,103,3035	0/0:14,0:13:36.18:0,36,436	0/0:16,0:16:11.46:0,11,74	0/0:84,0:80:95.60:0,96,1212	0/0:22,0:21:51.13:0,51,1213	0/0:12,0:12:33:0,33,705	0/0:50,0:49:89.97:0,90,3529	0/1:20,1:21:14.87:125,0,15	0/1:31,0:30:99:196,0,544	0/0:16,0:16:28.41:0,28,281	0/1:15,0:15:99:177,0,156
chr10	84509322	.	GCA	G	2114.77	PASS	AB=0.889;AC=31;AF=0.574;AN=54;BaseQRankSum=11.583;DP=799;FS=16.379;HRun=0;HaplotypeScore=175.3306;InbreedingCoeff=-0.0230;MQ=52.96;MQ0=16;MQRankSum=-4.579;QD=3.18;ReadPosRankSum=1.231;VQSLOD=1.4160;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,4:40:99:103,0,772	0/0:7,0:7:3.91:0,4,56	./.	0/0:21,0:11:3.01:0,3,43	0/1:17,3:20:34.21:34,0,400	1/1:6,0:25:24.96:117,25,0	1/1:22,12:41:23.49:355,23,0	0/1:14,0:22:2.04:109,0,2	0/1:30,2:31:33.03:33,0,950	0/1:36,0:36:74.98:75,0,127	0/0:21,0:21:7.53:0,8,97	0/1:25,5:30:99:116,0,638	0/1:22,3:25:50.91:51,0,600	0/1:31,3:33:12.75:13,0,936	0/1:10,0:17:4.79:5,0,53	0/1:28,1:29:20.34:20,0,34	0/1:51,0:51:10.88:11,0,63	0/1:34,5:40:51.39:51,0,960	1/1:11,2:14:18.23:111,18,0	1/1:3,0:18:2.08:15,2,0	1/1:66,19:85:45.35:505,45,0	0/1:17,1:18:22.18:22,0,281	0/0:15,0:15:27.08:0,27,394	0/0:47,1:49:81.15:0,81,1312	1/1:3,0:19:13.11:57,13,0	1/1:15,0:23:22.95:126,23,0	1/1:9,2:15:18.76:227,19,0	1/1:7,0:14:23.07:130,23,0
chr10	84509413	.	TA	T	2945.74	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.127;DP=1070;FS=20.196;HRun=1;HaplotypeScore=170.6755;InbreedingCoeff=1.0000;MQ=54.93;MQ0=14;MQRankSum=1.281;QD=32.73;ReadPosRankSum=0.920;VQSLOD=1.3088;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,111,1753	0/0:14,0:14:42.14:0,42,671	0/0:45,0:17:51.12:0,51,728	0/0:52,0:18:45.13:0,45,655	0/0:20,0:20:60.20:0,60,952	0/0:24,0:24:66.21:0,66,1030	0/0:49,0:48:99:0,112,1712	0/0:38,0:37:99:0,105,1643	0/0:43,0:43:99:0,122,1893	0/0:41,0:41:99:0,120,1912	0/0:28,0:28:84.29:0,84,1336	0/0:46,0:46:99:0,129,2023	0/0:28,0:28:84.29:0,84,1334	0/0:41,0:41:99:0,120,1889	1/1:0,37:35:77.83:1061,78,0	0/0:36,0:36:99:0,99,1558	0/0:41,0:40:99:0,99,1554	0/0:22,0:22:60.18:0,60,937	0/0:23,0:22:63.21:0,63,999	0/0:19,0:19:45.15:0,45,720	0/0:175,0:175:99:0,378,5874	0/0:20,0:20:57.19:0,57,909	0/0:21,0:21:57.19:0,57,911	0/0:51,0:51:99:0,138,2138	0/0:20,0:20:50.94:0,51,791	1/1:1,38:37:63.34:1441,63,0	0/0:36,0:37:99:0,102,1590	1/1:0,14:14:42.14:587,42,0
chr10	84509461	.	T	TAC	10073.98	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-16.766;DP=1038;FS=4.334;HRun=0;HaplotypeScore=158.0347;InbreedingCoeff=0.9997;MQ=58.78;MQ0=9;MQRankSum=2.843;QD=33.14;ReadPosRankSum=1.524;VQSLOD=6.8202;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,111,1394	0/0:16,0:16:36.12:0,36,462	0/0:46,0:26:26.56:0,27,525	0/0:54,0:34:45.73:0,46,687	0/0:29,0:29:75.24:0,75,958	0/0:19,0:19:42.12:0,42,526	1/1:8,33:40:71.99:1214,72,0	1/1:10,20:31:61.02:957,61,0	0/0:37,0:37:81.17:0,81,1020	0/0:38,0:38:90.29:0,90,1157	0/0:24,0:24:60.14:0,60,739	0/0:36,0:36:81.13:0,81,1040	0/0:30,0:30:72.22:0,72,905	0/0:36,0:36:90.29:0,90,1155	0/0:32,0:29:72.23:0,72,926	0/0:39,0:39:99:0,102,1311	0/0:36,0:36:90.23:0,90,1126	0/0:30,0:30:78.25:0,78,997	1/1:8,13:21:41.69:580,42,0	1/1:1,21:22:57.19:958,57,0	1/1:18,145:164:99:5691,340,0	0/0:27,0:27:72.22:0,72,910	0/0:25,0:25:54.17:0,54,693	0/0:52,0:52:99:0,123,1551	0/0:24,0:24:57.18:0,57,731	0/0:32,0:29:66.12:0,66,802	1/1:5,17:23:42.14:674,42,0	0/0:23,0:24:66.05:0,66,823
chr10	84509507	.	T	TAC	3653.48	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-6.554;DP=1038;FS=5.359;HRun=0;HaplotypeScore=150.1068;InbreedingCoeff=0.7932;MQ=55.95;MQ0=14;MQRankSum=-3.271;QD=25.20;ReadPosRankSum=-0.394;VQSLOD=4.4910;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:99:0,108,1457	0/0:14,0:14:30.08:0,30,368	0/0:30,0:7:6.49:0,6,68	0/1:49,0:19:11.96:12,0,263	0/0:28,0:28:75.22:0,75,940	0/0:19,0:19:48.15:0,48,610	0/0:33,0:34:62.82:0,63,772	0/0:45,0:44:99:0,102,1330	0/0:49,0:49:99:0,138,1679	0/0:55,0:55:99:0,126,1719	0/0:23,0:23:60.16:0,60,735	0/0:37,0:37:99:0,99,1226	0/0:36,0:36:87.28:0,87,1106	0/0:54,0:54:99:0,129,1601	1/1:14,22:32:75.73:1226,76,0	0/0:40,0:40:95.39:0,95,1292	0/0:28,0:28:75.24:0,75,952	0/0:29,0:29:74.18:0,74,923	0/0:24,0:23:54.15:0,54,659	0/0:28,0:28:63.20:0,63,801	0/0:131,0:128:99:0,258,3248	0/0:25,0:25:68.70:0,69,836	0/0:23,0:23:57.18:0,57,722	0/0:48,0:48:99:0,108,1373	0/0:25,0:24:63.20:0,63,802	1/1:9,25:31:7.89:1192,8,0	0/0:23,0:23:45.14:0,45,571	1/1:5,21:26:78.20:1224,78,0
chr10	84511057	.	C	CT	8118.31	PASS	AB=0.588;AC=33;AF=0.589;AN=56;BaseQRankSum=-5.538;DP=582;FS=1.985;HRun=9;HaplotypeScore=59.9737;InbreedingCoeff=0.9478;MQ=63.65;MQ0=0;MQRankSum=-3.570;QD=21.53;ReadPosRankSum=-1.882;VQSLOD=4.9527;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,31:35:87.24:962,87,0	1/1:0,11:11:30.08:332,30,0	0/0:7,0:7:14.63:0,15,129	0/0:11,0:11:23.10:0,23,196	0/0:30,0:30:74.98:0,75,651	1/1:4,0:18:34.09:170,34,0	0/1:3,7:10:1.99:208,0,2	1/1:8,23:31:69.09:728,69,0	0/0:19,0:19:47.74:0,48,392	1/1:4,28:32:81.30:903,81,0	1/1:1,22:23:69.17:753,69,0	0/0:19,0:19:41.92:0,42,364	0/0:11,0:13:32.03:0,32,266	0/0:14,0:14:38.98:0,39,335	1/1:2,0:14:31.25:156,31,0	1/1:3,16:19:35.66:428,36,0	1/1:6,22:28:54.15:597,54,0	0/0:19,0:19:50.94:0,51,436	1/1:6,15:20:13.05:372,13,0	1/1:3,23:26:60.09:638,60,0	1/1:0,14:14:42.11:465,42,0	0/0:21,0:21:59.97:0,60,517	0/0:25,0:25:65.97:0,66,573	0/0:27,0:27:68.93:0,69,594	1/1:5,0:22:42.74:218,43,0	1/1:6,1:35:85.71:463,86,0	1/1:4,19:23:54.15:597,54,0	1/1:6,0:15:25.57:128,26,0
chr10	84512395	.	TC	T	13462.40	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=13.934;DP=692;FS=9.575;HRun=3;HaplotypeScore=88.2848;InbreedingCoeff=0.9988;MQ=90.19;MQ0=0;MQRankSum=-5.988;QD=33.41;ReadPosRankSum=0.604;VQSLOD=4.7195;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,58:59:99:1971,159,0	1/1:1,7:8:21.03:243,21,0	0/0:28,0:28:75.24:0,75,1054	0/0:29,0:29:81.24:0,81,1115	0/0:32,0:32:93.30:0,93,1320	1/1:1,17:18:54.13:648,54,0	1/1:4,11:15:42.12:506,42,0	1/1:0,15:15:45.14:558,45,0	0/0:26,0:26:75.22:0,75,1026	1/1:0,33:33:99:1227,99,0	1/1:4,13:17:39.05:458,39,0	0/0:20,0:20:60.20:0,60,863	0/0:32,0:32:96.29:0,96,1341	0/0:23,0:23:66.20:0,66,931	1/1:1,20:21:63.20:777,63,0	1/1:3,15:18:48.15:592,48,0	1/1:2,36:37:99:1232,102,0	0/0:23,0:23:63.21:0,63,907	1/1:4,10:14:39.09:456,39,0	1/1:0,22:22:60.07:706,60,0	1/1:2,47:49:99:1507,126,0	0/0:26,0:26:69.20:0,69,955	0/0:22,0:22:63.21:0,63,907	0/0:28,0:28:84.27:0,84,1190	1/1:3,17:20:57.17:691,57,0	1/1:3,19:22:63.18:757,63,0	1/1:2,25:27:72.17:874,72,0	1/1:0,7:7:21.07:260,21,0
chr10	84512449	.	GT	G	11987.69	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=11.299;DP=654;FS=2.021;HRun=1;HaplotypeScore=92.6375;InbreedingCoeff=0.9957;MQ=89.48;MQ0=0;MQRankSum=-5.823;QD=36.00;ReadPosRankSum=-1.072;VQSLOD=4.5142;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,160,2298	1/1:1,12:13:39.12:526,39,0	0/0:27,0:27:60.51:0,61,832	0/0:33,1:34:67.37:0,67,990	0/0:22,0:22:63.15:0,63,869	1/1:0,25:25:66.22:917,66,0	1/1:0,18:18:45.15:626,45,0	1/1:0,19:19:42.10:529,42,0	0/0:26,0:26:78.26:0,78,1128	1/1:4,14:18:51.13:643,51,0	1/1:1,19:20:48.15:644,48,0	0/0:25,0:25:69.18:0,69,937	0/0:28,0:28:84.23:0,84,1138	0/0:20,0:20:60.13:0,60,832	1/1:0,22:22:54.18:753,54,0	1/1:1,23:24:66.21:902,66,0	1/1:4,32:36:99:1344,102,0	0/0:24,0:24:69.18:0,69,966	1/1:0,21:21:63.19:850,63,0	1/1:5,14:19:57.17:758,57,0	1/1:10,26:35:95.63:1204,96,0	0/0:13,0:13:36.05:0,36,466	0/0:20,0:20:57.19:0,57,818	0/0:27,0:27:81.24:0,81,1145	1/1:1,22:23:63.20:862,63,0	1/1:4,11:15:45.09:574,45,0	1/1:5,11:16:48.08:595,48,0	1/1:2,6:8:12.06:262,12,0
chr10	84513383	.	GACA	G	2214	PASS	AB=0.955;AC=17;AF=0.315;AN=54;BaseQRankSum=8.317;DP=631;FS=3.574;HRun=0;HaplotypeScore=105.5580;InbreedingCoeff=0.8427;MQ=67.26;MQ0=2;MQRankSum=-3.258;QD=11.13;ReadPosRankSum=1.291;VQSLOD=3.1084;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:38:39.04:296,39,0	1/1:6,4:10:12.04:159,12,0	./.	0/0:24,0:21:3.01:0,3,55	0/0:17,0:17:33.01:0,33,594	1/1:2,0:15:26.78:189,27,0	0/0:15,0:30:45.11:0,45,631	0/0:23,0:23:18.03:0,18,230	0/1:20,1:21:9.95:10,0,446	1/1:20,15:34:42.11:527,42,0	1/1:5,10:16:26.76:289,27,0	0/0:26,1:27:26.36:0,26,1104	0/0:21,0:22:36.10:0,36,640	0/0:30,1:31:8.27:0,8,723	0/0:22,1:23:8.33:0,8,808	1/1:10,7:17:18.06:239,18,0	1/1:10,19:29:45.15:597,45,0	0/0:28,0:28:57.20:0,57,1062	0/0:6,0:9:9.03:0,9,126	0/0:8,0:13:17.97:0,18,220	0/0:21,0:45:48.16:0,48,629	0/0:12,0:12:18.06:0,18,329	0/0:16,0:16:27.09:0,27,481	0/0:42,0:42:43.48:0,43,1527	1/1:7,0:18:17.42:108,17,0	0/0:22,0:22:36.12:0,36,675	0/0:12,0:23:30.08:0,30,375	0/0:6,0:6:9.03:0,9,160
chr10	84513637	.	AAC	A	417.48	PASS	AB=0.878;AC=7;AF=0.130;AN=54;BaseQRankSum=1.766;DP=616;FS=2.702;HRun=0;HaplotypeScore=93.1563;InbreedingCoeff=0.3777;MQ=61.45;MQ0=22;MQRankSum=1.932;QD=3.66;ReadPosRankSum=1.317;VQSLOD=2.2135;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:20.91:0,21,191	0/0:8,0:11:17.94:0,18,202	./.	0/0:25,0:20:0:0,0,0	0/1:16,4:20:51.23:51,0,423	0/0:12,0:12:15.01:0,15,147	0/0:12,0:15:5.99:0,6,50	0/0:23,0:21:8.93:0,9,77	0/1:21,4:25:62.41:62,0,334	0/0:14,0:24:41.66:0,42,339	0/0:9,0:20:29.93:0,30,284	0/0:20,0:19:10.24:0,10,346	1/1:10,1:10:3.48:34,3,0	0/0:27,0:25:12.91:0,13,524	1/1:10,17:28:35.93:375,36,0	0/0:6,0:11:11.87:0,12,87	0/0:21,0:21:12:0,12,121	0/1:28,2:30:25.46:25,0,428	0/0:12,0:15:14.86:0,15,113	0/0:17,0:22:14.16:0,14,87	0/0:35,0:29:14.95:0,15,137	0/0:21,0:21:30.10:0,30,445	0/0:30,0:29:24.22:0,24,659	0/0:39,0:39:27.35:0,27,770	0/0:8,0:19:20.96:0,21,177	0/0:16,0:16:26.91:0,27,333	0/0:11,0:21:14.27:0,14,114	0/0:13,0:13:21.07:0,21,313
chr10	84513713	.	T	TA	783.11	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.050;DP=642;FS=0.746;HRun=7;HaplotypeScore=72.0774;InbreedingCoeff=0.8434;MQ=67.54;MQ0=0;MQRankSum=-0.743;QD=29.00;ReadPosRankSum=0.256;VQSLOD=4.0954;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:27:74.59:878,75,0	0/0:12,0:12:35.80:0,36,331	0/0:15,0:15:33.04:0,33,316	0/0:13,0:13:20.93:0,21,201	0/0:33,0:33:93.11:0,93,889	0/0:22,0:22:66.11:0,66,637	0/0:22,0:21:60.10:0,60,579	0/0:31,0:31:84.12:0,84,806	0/0:25,0:25:63.07:0,63,600	0/0:37,0:37:99:0,105,1010	0/0:18,0:18:45.03:0,45,418	0/0:16,0:16:42.05:0,42,400	0/0:14,0:14:42.07:0,42,405	0/0:25,0:25:75.11:0,75,718	0/0:23,0:23:51.06:0,51,487	0/0:15,0:15:42.06:0,42,406	0/0:16,0:16:48.08:0,48,463	0/0:29,0:29:63.07:0,63,601	0/0:24,0:24:66.09:0,66,631	0/0:25,0:25:66.09:0,66,637	0/0:26,0:26:68.78:0,69,629	0/0:23,0:23:69.11:0,69,666	0/0:28,0:28:63.09:0,63,608	0/0:24,0:24:57.08:0,57,550	0/0:36,0:36:93.11:0,93,887	0/0:15,1:16:2.81:0,3,307	0/0:25,0:25:57.08:0,57,545	0/0:22,0:22:54.01:0,54,511
chr10	84514941	.	TCA	T	1849.12	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.960;DP=715;FS=8.917;HRun=0;HaplotypeScore=88.7626;InbreedingCoeff=0.9995;MQ=77.47;MQ0=0;MQRankSum=-4.091;QD=40.20;ReadPosRankSum=0.917;VQSLOD=4.9772;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,147,2617	0/0:18,0:18:54.19:0,54,990	0/0:16,0:16:34.14:0,34,509	0/0:16,0:16:39.10:0,39,620	0/0:24,0:24:72.25:0,72,1308	0/0:19,0:19:54.19:0,54,980	0/0:17,0:17:48.16:0,48,880	0/0:31,0:31:87.30:0,87,1578	0/0:26,0:26:75.24:0,75,1344	0/0:33,0:33:90.31:0,90,1613	0/0:14,0:14:39.13:0,39,709	0/0:30,0:30:87.30:0,87,1583	0/0:15,0:15:45.15:0,45,823	0/0:21,0:21:57.19:0,57,1015	0/0:31,0:31:93.32:0,93,1705	0/0:15,0:15:45.14:0,45,789	0/0:40,0:40:99:0,120,2156	0/0:19,0:19:51.17:0,51,935	0/0:28,0:28:78.27:0,78,1430	0/0:26,0:26:75.26:0,75,1374	0/0:50,0:50:99:0,151,2749	0/0:27,0:27:81.26:0,81,1438	0/0:18,0:18:51.17:0,51,934	0/0:39,0:39:99:0,117,2133	0/0:29,0:29:81.28:0,81,1479	1/1:4,32:36:99:1541,108,0	0/0:15,0:15:42.14:0,42,770	1/1:0,10:10:30.10:430,30,0
chr10	84514987	.	GT	G	823.75	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.876;DP=653;FS=2.141;HRun=9;HaplotypeScore=65.3137;InbreedingCoeff=0.9902;MQ=76.26;MQ0=0;MQRankSum=-4.801;QD=18.72;ReadPosRankSum=2.165;VQSLOD=4.1112;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,1:47:99:0,108,1475	0/0:7,0:7:15.04:0,15,173	0/0:21,0:20:48.13:0,48,539	0/0:18,0:18:45.13:0,45,511	0/0:18,0:18:45.11:0,45,502	0/0:19,0:19:54.13:0,54,603	0/0:20,0:20:51.14:0,51,578	0/0:30,0:30:63.18:0,63,719	0/0:18,0:18:54.16:0,54,623	0/0:26,0:26:69.20:0,69,788	0/0:13,0:13:36.11:0,36,415	0/0:27,0:27:69.21:0,69,796	0/0:17,0:17:42.12:0,42,484	0/0:16,0:16:45.12:0,45,509	0/0:34,0:34:90.26:0,90,1029	0/0:9,0:9:27.06:0,27,293	0/0:35,0:35:99:0,105,1212	0/0:18,0:18:54.13:0,54,610	0/0:31,0:31:87.26:0,87,1001	0/0:22,0:22:57.17:0,57,658	0/0:38,0:38:99:0,105,1192	0/0:26,0:26:72.21:0,72,830	0/0:16,0:16:48.13:0,48,539	0/0:44,0:44:99:0,120,1385	0/0:20,0:20:48.13:0,48,538	1/1:7,28:35:52.38:725,52,0	0/0:19,0:19:54.16:0,54,623	1/1:2,7:9:24.01:219,24,0
chr10	84515819	.	TC	T	365.30	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.011;DP=622;FS=1.906;HRun=1;HaplotypeScore=87.6775;InbreedingCoeff=0.9914;MQ=90.72;MQ0=0;MQRankSum=-6.526;QD=18.27;ReadPosRankSum=2.418;VQSLOD=4.1459;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,117,1806	0/0:13,0:13:36.12:0,36,575	0/0:29,0:29:84.22:0,84,1273	0/0:30,0:28:69.42:0,69,1208	0/0:23,0:23:69.23:0,69,1091	0/0:12,0:12:36.12:0,36,573	0/0:26,0:26:78.27:0,78,1243	0/0:33,0:33:93.28:0,93,1420	0/0:15,0:15:42.13:0,42,648	0/0:38,0:38:99:0,114,1785	0/0:18,0:18:54.10:0,54,828	0/0:21,0:21:63.20:0,63,983	0/0:16,0:16:48.16:0,48,761	0/0:13,0:13:39.11:0,39,574	0/0:23,0:23:66.22:0,66,1045	0/0:19,0:19:57.14:0,57,881	0/0:19,0:19:54.18:0,54,861	0/0:15,0:15:45.14:0,45,695	0/0:22,0:22:66.21:0,66,1033	0/0:18,0:18:54.18:0,54,863	0/0:37,0:37:99:0,102,1553	0/0:20,0:20:60.19:0,60,937	0/0:20,0:20:54.18:0,54,863	0/0:33,0:33:99:0,99,1582	0/0:20,0:20:57.04:0,57,827	1/1:0,15:15:44.91:362,45,0	0/0:25,0:24:73.42:0,73,1102	1/1:0,5:5:14.97:122,15,0
chr10	84515821	.	TAGA	T	643.93	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.652;DP=620;FS=0.906;HRun=0;HaplotypeScore=111.5370;InbreedingCoeff=0.9915;MQ=89.70;MQ0=0;MQRankSum=-7.101;QD=32.20;ReadPosRankSum=2.716;VQSLOD=4.3115;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,117,2863	0/0:13,0:13:36.12:0,36,886	0/0:27,0:27:77.89:0,78,1739	0/0:32,0:30:84.16:0,84,1893	0/0:24,0:24:66.23:0,66,1597	0/0:12,0:12:36.11:0,36,838	0/0:25,0:25:75.26:0,75,1849	0/0:32,0:32:90.28:0,90,2129	0/0:14,0:14:39.13:0,39,961	0/0:38,0:38:99:0,114,2759	0/0:17,0:17:51.18:0,51,1237	0/0:21,0:21:63.22:0,63,1553	0/0:17,0:17:48.16:0,48,1177	0/0:12,0:12:36.12:0,36,888	0/0:23,0:23:66.23:0,66,1625	0/0:19,0:19:57.20:0,57,1373	0/0:19,0:19:54.19:0,54,1329	0/0:15,0:15:45.15:0,45,1109	0/0:23,0:23:69.23:0,69,1626	0/0:18,0:18:54.19:0,54,1323	0/0:35,0:35:96.80:0,97,2358	0/0:21,0:21:63.21:0,63,1503	0/0:22,0:22:60.21:0,60,1471	0/0:33,0:33:99:0,99,2411	0/0:19,0:19:54.19:0,54,1322	1/1:0,15:15:45.14:572,45,0	0/0:25,0:24:73.13:0,73,1755	1/1:0,5:5:15.05:191,15,0
chr10	84515853	.	GGAGAGA	G	1232.77	PASS	AB=0.917;AC=16;AF=0.308;AN=52;BaseQRankSum=5.204;DP=648;FS=14.952;HRun=0;HaplotypeScore=162.5254;InbreedingCoeff=0.7041;MQ=72.17;MQ0=7;MQRankSum=-6.443;QD=5.96;ReadPosRankSum=0.977;VQSLOD=1.9563;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,2:39:11.65:167,12,0	1/1:5,2:8:9.03:164,9,0	./.	./.	0/0:24,1:27:24.06:0,24,493	0/0:23,0:24:47.73:0,48,1277	0/0:28,0:28:11.81:0,12,354	0/0:20,0:20:15.05:0,15,391	0/0:16,0:18:33.11:0,33,829	1/1:27,7:36:30.03:474,30,0	1/1:15,0:17:3.01:57,3,0	0/0:21,0:23:27.08:0,27,889	0/1:20,0:21:4.38:4,0,834	0/0:10,0:11:24.08:0,24,675	1/1:14,0:24:13.10:175,13,0	1/1:10,5:17:17.42:275,17,0	1/1:13,2:15:3.01:61,3,0	0/0:13,0:14:17.65:0,18,480	0/0:17,0:17:27.09:0,27,703	0/0:18,0:23:13.12:0,13,399	0/0:33,0:33:14.95:0,15,401	0/1:25,1:29:31.79:32,0,691	0/0:18,0:20:21.05:0,21,461	0/0:40,0:42:69.24:0,69,1966	0/0:18,0:17:6.02:0,6,169	0/0:26,0:27:42.14:0,42,1169	0/0:15,0:18:12.93:0,13,279	0/0:8,0:8:9.03:0,9,265
chr10	84515937	.	A	AG	2928.49	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.322;DP=886;FS=13.814;HRun=1;HaplotypeScore=116.7853;InbreedingCoeff=1.0000;MQ=69.81;MQ0=0;MQRankSum=-2.192;QD=43.07;ReadPosRankSum=-0.914;VQSLOD=1.3616;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:39:83.60:0,84,1325	0/0:15,0:15:39.13:0,39,546	0/0:39,0:36:96.31:0,96,1313	0/0:50,0:48:99:0,113,1712	0/0:28,0:28:81.27:0,81,1129	0/0:21,0:21:49.41:0,49,674	0/0:35,0:35:99:0,105,1466	0/0:42,0:41:99:0,123,1703	0/0:36,0:36:99:0,108,1504	0/0:50,0:50:99:0,150,2084	0/0:17,0:17:45.15:0,45,628	0/0:19,0:19:51.17:0,51,713	0/0:29,0:29:84.28:0,84,1170	0/0:26,0:26:78.26:0,78,1088	0/0:37,0:37:90.30:0,90,1258	0/0:30,0:30:72.23:0,72,990	0/0:21,0:21:57.19:0,57,797	0/0:22,0:22:63.21:0,63,881	0/0:27,0:27:81.25:0,81,1112	0/0:32,0:32:87.29:0,87,1216	0/0:45,0:45:99:0,111,1550	0/0:33,0:33:93.30:0,93,1282	0/0:30,0:30:87.29:0,87,1216	0/0:42,0:42:99:0,108,1510	0/0:29,0:29:75.24:0,75,1033	1/1:1,47:49:99:2142,100,0	0/0:24,0:24:69.23:0,69,961	1/1:1,18:19:57.19:908,57,0
chr10	84516032	.	G	GTGTGT	5134.18	PASS	AB=0.581;AC=3;AF=0.054;AN=56;BaseQRankSum=-8.353;DP=1031;FS=14.880;HRun=0;HaplotypeScore=202.2528;InbreedingCoeff=0.6478;MQ=65.60;MQ0=1;MQRankSum=-3.917;QD=73.35;ReadPosRankSum=3.017;VQSLOD=5.1209;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,125,2639	0/0:12,0:12:33.11:0,33,684	0/0:52,0:49:99:0,123,2451	0/0:40,0:39:93.32:0,93,1863	0/0:29,0:29:78.27:0,78,1617	0/0:31,0:31:90.31:0,90,1832	0/0:30,0:30:84.29:0,84,1701	0/0:44,0:43:99:0,108,2024	0/0:35,0:35:93.32:0,93,1918	0/0:56,0:56:99:0,163,3257	0/0:26,0:26:69.23:0,69,1394	0/0:36,0:36:99:0,99,1962	0/0:40,0:40:99:0,114,2288	0/0:36,0:36:99:0,99,1996	0/0:50,0:50:99:0,138,2818	0/0:44,0:44:99:0,114,2356	0/0:20,0:20:57.20:0,57,1163	0/0:25,0:24:46.75:0,47,1177	0/0:25,0:25:75.26:0,75,1492	0/0:29,0:29:81.25:0,81,1586	0/0:71,0:71:99:0,191,3829	0/0:40,0:40:99:0,117,2409	0/0:34,0:34:93.28:0,93,1849	0/0:53,0:53:99:0,123,2470	0/0:31,0:31:87.30:0,87,1775	0/1:14,34:50:37.06:3666,0,37	0/0:18,0:18:48.16:0,48,964	1/1:4,15:20:49.58:1468,50,0
chr10	84516219	.	ATGAG	A	2549.66	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.191;DP=1210;FS=0.499;HRun=0;HaplotypeScore=229.8482;InbreedingCoeff=1.0000;MQ=64.47;MQ0=1;MQRankSum=-1.819;QD=43.96;ReadPosRankSum=1.059;VQSLOD=3.6311;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,45:58:99:2645,145,0	0/0:21,0:21:57.10:0,57,1325	0/0:55,0:51:99:0,101,2828	0/0:49,0:45:99:0,101,2188	0/0:37,0:37:99:0,102,2424	0/0:27,0:27:50.90:0,51,918	0/0:37,0:37:94.97:0,95,2182	0/0:56,0:56:99:0,156,3569	0/0:59,0:59:99:0,178,4562	0/0:64,0:64:99:0,190,4903	0/0:23,0:23:66.11:0,66,1512	0/0:48,0:48:99:0,135,3367	0/0:45,0:45:99:0,132,3443	0/0:47,0:47:99:0,141,3574	0/0:64,0:64:99:0,172,4594	0/0:59,0:59:99:0,172,4498	0/0:31,0:31:54.92:0,55,1716	0/0:27,0:27:74.20:0,74,1768	0/0:19,0:19:54.16:0,54,1310	0/0:35,0:33:87.20:0,87,2010	0/0:71,0:71:99:0,196,4901	0/0:40,0:40:99:0,108,2474	0/0:39,0:39:99:0,111,2744	0/0:50,0:50:99:0,138,3489	0/0:24,0:23:42.14:0,42,975	0/0:61,0:61:99:0,169,4209	0/0:31,0:31:93.25:0,93,2235	0/0:32,0:32:83.16:0,83,2213
chr10	84516235	.	TATGTGTGA	T	2234.51	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.807;DP=1195;FS=0.000;HRun=0;HaplotypeScore=320.5588;InbreedingCoeff=0.9999;MQ=62.74;MQ0=0;MQRankSum=-8.900;QD=47.54;ReadPosRankSum=0.086;VQSLOD=2.4479;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,137,6140	0/0:18,0:18:54.15:0,54,2119	0/0:51,0:48:99:0,131,4370	0/0:46,0:44:99:0,114,3044	0/0:37,0:37:99:0,108,4397	1/1:1,23:24:48.16:1273,48,0	0/0:35,0:35:90.81:0,91,3920	0/0:47,0:47:99:0,141,4642	0/0:59,0:59:99:0,178,7326	0/0:71,0:71:99:0,214,8677	0/0:24,0:24:63.22:0,63,2512	0/0:51,0:51:99:0,150,6261	0/0:48,0:48:99:0,138,5823	0/0:46,0:46:99:0,138,5327	0/0:60,0:60:99:0,178,7296	0/0:53,0:53:99:0,160,6521	0/0:33,0:33:89.20:0,89,3106	0/0:31,0:30:42.78:0,43,2755	0/0:22,0:22:66.22:0,66,2549	0/0:26,0:24:72.20:0,72,2734	0/0:69,0:69:99:0,204,7929	0/0:47,0:47:99:0,138,5716	0/0:38,0:38:99:0,108,4171	0/0:51,0:51:99:0,132,5187	1/1:0,23:22:36.12:1083,36,0	0/0:60,0:60:99:0,181,7378	0/0:32,0:32:96.31:0,96,3945	0/0:34,0:34:93.56:0,94,3678
chr10	84516605	.	AGT	A	4209.65	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=5.035;DP=928;FS=4.221;HRun=0;HaplotypeScore=455.0610;InbreedingCoeff=0.9296;MQ=40.95;MQ0=3;MQRankSum=-8.689;QD=17.61;ReadPosRankSum=-0.079;VQSLOD=3.1555;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:30.10:0,30,514	1/1:6,6:12:18.04:216,18,0	0/0:24,0:11:18.02:0,18,262	0/0:27,0:20:39.12:0,39,621	0/0:36,0:36:64.67:0,65,982	1/1:14,18:32:20.39:618,20,0	0/0:31,0:27:36.12:0,36,605	0/0:28,0:26:44.99:0,45,688	0/0:40,1:41:19.51:0,20,821	1/1:25,30:55:49.73:1083,50,0	1/1:8,17:25:3.23:521,3,0	0/0:45,0:45:66.61:0,67,1073	0/0:45,0:45:75.16:0,75,1247	0/0:33,0:33:60.19:0,60,989	1/1:31,0:31:16.34:155,16,0	1/1:10,27:37:43.07:774,43,0	1/1:7,3:10:3.01:38,3,0	0/0:17,0:17:17.98:0,18,247	0/0:24,0:24:20.54:0,21,644	0/0:29,0:29:47.91:0,48,762	0/0:62,0:61:45.15:0,45,769	0/0:48,0:48:93.05:0,93,1583	0/0:40,0:40:72.16:0,72,1232	0/0:31,0:31:18.37:0,18,302	1/1:15,22:37:64.08:804,64,0	0/0:39,1:40:38.99:0,39,1319	0/0:37,0:37:90.26:0,90,1475	0/0:16,0:16:18.04:0,18,281
chr10	84518231	.	T	TTG	618.63	PASS	AB=0.866;AC=11;AF=0.212;AN=52;BaseQRankSum=-2.084;DP=636;FS=2.758;HRun=0;HaplotypeScore=134.8126;InbreedingCoeff=0.3783;MQ=56.79;MQ0=14;MQRankSum=-0.693;QD=2.80;ReadPosRankSum=-3.389;VQSLOD=1.6875;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:29:1.95:48,0,2	0/0:6,0:6:2.83:0,3,14	./.	./.	0/0:15,0:16:13.68:0,14,116	0/0:3,0:13:13.54:0,14,57	0/1:24,11:35:23.33:74,0,23	1/1:17,0:17:6.72:33,7,0	0/0:22,0:23:18.14:0,18,199	0/0:29,0:27:11.36:0,11,56	0/0:10,0:10:2.84:0,3,14	0/0:25,0:25:27.13:0,27,273	0/0:19,0:19:29.09:0,29,291	0/0:18,0:18:20.88:0,21,204	0/0:5,0:14:22.62:0,23,112	0/0:21,0:20:8.99:0,9,44	0/1:20,0:19:1.82:2,0,9	0/0:20,0:19:20.72:0,21,208	1/1:13,4:16:10.31:157,10,0	0/1:13,5:19:20.79:113,0,21	0/1:39,10:50:82.60:115,0,83	0/0:26,0:25:18.99:0,19,195	0/0:25,0:25:12.33:0,12,371	0/0:43,0:44:35.77:0,36,399	0/0:5,0:17:15.45:0,15,73	0/0:17,0:35:29.03:0,29,156	1/1:20,13:30:13.96:223,14,0	0/0:2,0:5:2.84:0,3,14
chr10	84518253	.	GTGTGTGTGTGTGTGTGTA	G	3504.65	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=8.545;DP=655;FS=0.543;HRun=0;HaplotypeScore=260.1818;InbreedingCoeff=0.5923;MQ=50.94;MQ0=24;MQRankSum=-1.737;QD=20.74;ReadPosRankSum=1.827;VQSLOD=2.4073;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:17.28:0,17,257	1/1:10,0:10:2.95:231,3,0	0/0:18,0:4:6.02:0,6,80	0/0:18,0:4:5.18:0,5,26	0/0:14,0:14:20.94:0,21,1309	0/0:20,0:19:33.09:0,33,704	0/0:30,0:30:33.63:0,34,1202	0/0:22,0:22:57.06:0,57,1591	0/0:25,0:25:48.16:0,48,2585	1/1:7,26:31:57.46:983,57,0	1/1:4,8:12:8.24:193,8,0	0/0:23,0:22:45.07:0,45,2662	0/0:18,0:18:40.04:0,40,2316	0/0:19,0:18:29.97:0,30,1843	0/1:19,0:19:3.41:1149,0,3	1/1:8,14:21:13.15:464,13,0	1/1:8,17:23:2.09:148,2,0	0/0:22,0:20:42.13:0,42,2738	0/0:16,0:15:38.09:0,38,1626	0/0:21,0:21:33.11:0,33,2267	0/0:44,0:43:46.02:0,46,2698	0/0:23,0:22:48.08:0,48,2896	0/0:29,0:29:75.21:0,75,4633	0/0:42,0:42:87.05:0,87,4994	0/0:23,0:22:34.68:0,35,830	0/1:37,0:36:99:303,0,907	0/0:28,0:27:45.69:0,46,1812	0/1:11,0:11:33.55:34,0,391
chr10	84518317	.	CCTTT	C	523.74	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.018;DP=558;FS=7.284;HRun=0;HaplotypeScore=108.4778;InbreedingCoeff=0.9069;MQ=66.22;MQ0=1;MQRankSum=-1.996;QD=26.19;ReadPosRankSum=0.278;VQSLOD=3.1793;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:96.32:0,96,2295	0/0:7,0:7:18.06:0,18,443	0/0:21,0:16:8.20:0,8,649	0/0:29,0:23:30.34:0,30,698	0/0:16,0:16:48.16:0,48,1182	0/0:9,0:9:18.06:0,18,411	0/0:27,0:27:66.22:0,66,1549	0/0:35,0:35:90.30:0,90,1940	0/0:19,0:19:51.16:0,51,1141	0/0:24,0:24:51.07:0,51,1220	0/0:12,0:12:33.11:0,33,816	0/0:13,0:13:33.11:0,33,830	0/0:11,0:11:33.11:0,33,830	0/0:18,0:18:36.21:0,36,1197	1/1:6,14:20:36.12:618,36,0	0/0:11,0:11:15.05:0,15,379	0/0:22,0:21:36.12:0,36,835	0/0:13,0:13:33.08:0,33,731	0/0:20,0:20:48.16:0,48,1102	0/0:16,0:16:42.14:0,42,952	0/0:22,0:22:54.16:0,54,1176	0/0:27,0:27:66.22:0,66,1596	0/0:15,0:15:42.14:0,42,1004	0/0:27,0:27:60.20:0,60,1328	0/0:23,0:23:45.15:0,45,1092	0/0:31,0:31:72.20:0,72,1712	0/0:15,0:15:36.12:0,36,904	0/0:17,0:17:45.15:0,45,1128
chr10	84519469	.	GA	G	704.50	PASS	AB=0.920;AC=17;AF=0.304;AN=56;BaseQRankSum=3.761;DP=550;FS=0.470;HRun=15;HaplotypeScore=87.1746;InbreedingCoeff=0.6173;MQ=76.73;MQ0=6;MQRankSum=1.057;QD=4.00;ReadPosRankSum=5.834;VQSLOD=0.9342;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,1:32:33.90:111,34,0	1/1:2,3:5:8.80:54,9,0	0/0:41,1:23:23.88:0,24,248	0/0:31,0:20:0.31:0,0,68	0/0:12,0:16:29.70:0,30,221	0/0:3,0:11:8.56:0,9,44	0/0:9,0:17:24.84:0,25,175	0/0:26,1:27:34.58:0,35,395	0/0:18,0:21:29.85:0,30,237	1/1:4,14:19:28.03:165,28,0	1/1:7,3:10:11.65:75,12,0	0/0:20,0:20:17.95:0,18,145	0/0:12,2:15:0.16:0,0,200	0/1:15,1:16:1.37:1,0,110	1/1:4,0:19:16.81:51,17,0	1/1:6,13:20:7.84:163,8,0	1/1:11,10:24:23.73:248,24,0	0/0:15,0:15:20.35:0,20,271	0/0:23,0:24:20.97:0,21,277	0/0:15,1:16:1.49:0,1,165	0/1:13,2:15:13.31:13,0,130	0/0:12,0:15:26.84:0,27,207	0/1:14,0:15:5.14:5,0,97	0/0:26,5:31:39.09:0,39,402	0/0:4,0:16:8.18:0,8,37	0/0:28,0:28:29.11:0,29,353	0/0:18,0:19:7.55:0,8,176	0/0:9,0:10:6.42:0,6,156
chr10	84519594	.	TACACACACAC	T	1149.86	PASS	AB=0.866;AC=10;AF=0.192;AN=52;BaseQRankSum=3.583;DP=435;FS=5.088;HRun=0;HaplotypeScore=125.6386;InbreedingCoeff=0.1039;MQ=62.18;MQ0=20;MQRankSum=-2.380;QD=9.66;ReadPosRankSum=1.251;VQSLOD=2.0629;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:23:29.76:30,0,44	0/0:6,0:6:6.02:0,6,176	./.	0/0:20,0:11:0.47:0,0,1	0/0:11,0:11:12.04:0,12,439	./.	0/1:15,0:16:34.88:78,0,35	0/0:20,0:19:8.95:0,9,94	0/0:21,0:21:8.15:0,8,643	0/0:22,0:21:48.16:0,48,1821	0/0:14,0:14:18.06:0,18,736	0/0:10,0:10:12.03:0,12,395	0/0:12,0:12:24.08:0,24,1063	0/0:16,0:15:15.05:0,15,446	0/0:18,1:19:14.09:0,14,150	0/0:18,0:18:14.83:0,15,619	0/0:12,0:12:12.93:0,13,411	0/0:13,0:12:27.09:0,27,920	0/1:10,0:11:16.21:26,0,16	0/1:4,0:6:2.45:2,0,35	0/0:16,0:14:2.29:0,2,6	0/0:13,0:12:8.56:0,9,397	0/0:10,0:10:12.04:0,12,460	0/0:21,0:21:15.05:0,15,588	1/1:9,1:11:0.47:1,0,0	0/1:13,7:21:41.58:880,0,42	0/1:17,0:17:81.25:81,0,87	1/1:6,3:10:6.02:176,6,0
chr10	84519680	.	GAGAA	G	1318.81	PASS	AB=0.986;AC=26;AF=0.464;AN=56;BaseQRankSum=9.070;DP=525;FS=3.622;HRun=0;HaplotypeScore=137.8177;InbreedingCoeff=0.2629;MQ=45.74;MQ0=25;MQRankSum=-7.675;QD=4.08;ReadPosRankSum=-6.411;VQSLOD=0.2142;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:1.12:1,0,5	1/1:9,1:10:5.17:108,5,0	0/0:18,0:9:19.13:0,19,188	0/1:34,0:10:9.41:9,0,62	0/0:18,0:18:42.04:0,42,795	0/1:20,0:20:18.80:110,0,19	0/1:22,0:21:0.81:83,0,1	1/1:19,0:18:5.26:80,5,0	0/0:27,0:27:72.02:0,72,1273	1/1:21,2:22:12:331,12,0	1/1:13,2:15:1.87:15,2,0	0/0:18,0:16:38.96:0,39,570	0/0:15,0:15:26.91:0,27,490	0/0:19,0:18:41.96:0,42,899	1/1:19,0:17:9.93:86,10,0	1/1:15,2:17:8.71:68,9,0	0/1:5,1:6:12.27:21,0,12	0/0:26,0:26:9:0,9,756	0/1:10,0:9:23.96:69,0,24	1/1:22,0:19:18.34:95,18,0	1/1:6,0:5:1.11:4,1,0	0/0:20,0:20:48.58:0,49,831	0/0:21,0:20:43.15:0,43,997	0/0:20,0:19:38.92:0,39,745	0/1:12,0:12:20.42:87,0,20	0/1:37,0:36:99:282,0,158	0/1:17,0:17:8.71:9,0,31	0/1:12,0:5:6.54:38,0,7
chr10	84519692	.	GAC	G	1561.50	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=11.165;DP=537;FS=6.647;HRun=0;HaplotypeScore=116.2148;InbreedingCoeff=0.6169;MQ=50.51;MQ0=14;MQRankSum=-8.036;QD=5.70;ReadPosRankSum=-6.720;VQSLOD=-0.5655;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:8.81:53,9,0	1/1:8,0:8:15.04:182,15,0	0/0:30,0:12:26.50:0,26,325	0/1:51,0:17:18.70:19,0,234	0/0:20,0:20:50.88:0,51,808	0/1:15,0:15:4.58:114,0,5	1/1:19,2:21:14.62:139,15,0	1/1:21,0:21:37.51:205,38,0	0/0:28,0:28:78.23:0,78,1344	1/1:7,14:20:45.14:347,45,0	1/1:3,8:11:11.88:84,12,0	0/0:20,0:18:48.10:0,48,761	0/0:15,0:15:29.88:0,30,404	0/0:20,0:20:54.12:0,54,889	1/1:19,0:18:20.37:135,20,0	1/1:15,0:15:14.86:144,15,0	0/1:7,0:7:10.91:11,0,49	0/0:27,0:27:55.86:0,56,1130	0/1:11,0:11:3.09:98,0,3	1/1:21,0:19:14.44:102,14,0	1/1:3,4:6:4.23:25,4,0	0/0:20,0:20:54.15:0,54,950	0/0:22,0:21:57.11:0,57,900	0/0:18,0:18:41.94:0,42,707	0/1:13,0:13:9.04:107,0,9	0/0:35,0:34:31.23:0,31,766	0/1:18,0:17:0.03:0,0,63	0/0:8,0:8:18.89:0,19,198
chr10	84519694	.	C	CAG	3002.49	PASS	AB=0.630;AC=26;AF=0.464;AN=56;BaseQRankSum=10.442;DP=556;FS=5.892;HRun=0;HaplotypeScore=114.3407;InbreedingCoeff=0.7554;MQ=51.67;MQ0=14;MQRankSum=-7.618;QD=14.03;ReadPosRankSum=-4.851;VQSLOD=2.1915;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:1.98:0,2,4	1/1:8,0:8:15.01:144,15,0	0/0:33,0:13:20.12:0,20,229	0/0:54,0:21:1.91:0,2,222	0/0:20,0:20:47.88:0,48,573	1/1:15,0:15:23.24:232,23,0	1/1:21,0:21:34.34:414,34,0	1/1:19,3:21:27.95:343,28,0	0/0:29,0:29:75.22:0,75,938	1/1:20,0:19:41.74:504,42,0	1/1:11,0:11:13.29:176,13,0	0/0:21,0:19:48.11:0,48,567	0/0:16,0:16:24.07:0,24,298	0/0:21,0:21:51.16:0,51,647	1/1:18,0:17:0.41:2,0,0	1/1:16,0:16:15.03:183,15,0	0/1:4,4:8:28.69:29,0,32	0/0:28,0:28:69.10:0,69,830	1/1:5,10:15:30.44:368,30,0	1/1:21,0:19:30.44:349,30,0	1/1:7,0:6:5.97:65,6,0	0/0:21,0:21:54.17:0,54,686	0/0:21,0:21:47.96:0,48,589	0/0:18,0:18:39.12:0,39,494	1/1:13,0:13:35.01:346,35,0	0/0:36,0:35:36.19:0,36,688	0/1:6,12:18:26.70:58,0,27	0/0:8,0:8:20.54:0,21,185
chr10	84519706	.	CAA	C	69.35	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=5.199;DP=579;FS=0.973;HRun=5;HaplotypeScore=121.3952;InbreedingCoeff=0.6567;MQ=55.86;MQ0=11;MQRankSum=-3.845;QD=1.58;ReadPosRankSum=-1.561;VQSLOD=-0.6770;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:6.02:69,6,0	0/1:9,0:9:9.78:10,0,103	0/0:43,0:18:28.56:0,29,297	0/0:56,1:23:18.83:0,19,446	0/0:19,0:19:56.93:0,57,874	0/0:16,0:16:12.80:0,13,236	0/0:21,0:21:27.46:0,27,347	0/0:27,0:26:71.42:0,71,612	0/0:30,0:30:75.81:0,76,1392	0/0:22,0:21:49.75:0,50,399	0/0:9,0:9:14.98:0,15,128	0/0:17,0:17:51.06:0,51,773	0/0:13,0:13:36.10:0,36,616	0/0:20,0:20:57.19:0,57,1002	1/1:1,16:16:9.02:101,9,0	0/0:17,0:17:23.79:0,24,179	0/0:11,0:10:18.01:0,18,193	0/0:26,0:26:78.20:0,78,1344	0/0:19,0:19:41:0,41,333	0/0:22,0:22:32.18:0,32,329	0/0:7,0:7:5.92:0,6,41	0/0:21,0:21:63.20:0,63,1084	0/0:16,0:16:45.15:0,45,785	0/0:16,0:16:35.95:0,36,612	0/0:12,0:12:30:0,30,278	0/0:37,0:36:99:0,102,1672	0/0:25,0:23:32.97:0,33,285	0/0:11,0:11:33.11:0,33,562
chr10	84520308	.	G	GGTGTGT	3442.53	PASS	AB=1.000;AC=34;AF=0.654;AN=52;BaseQRankSum=4.714;DP=562;FS=5.096;HRun=0;HaplotypeScore=148.8158;InbreedingCoeff=0.7165;MQ=62.98;MQ0=10;MQRankSum=-6.964;QD=9.98;ReadPosRankSum=-5.054;VQSLOD=0.7691;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,4:28:12.04:312,12,0	1/1:12,0:13:2.93:58,3,0	./.	./.	0/0:20,0:20:26.11:0,26,458	1/1:15,0:17:3.01:78,3,0	1/1:21,0:21:18.99:362,19,0	1/1:18,0:18:15.94:313,16,0	0/0:32,0:34:39.58:0,40,742	1/1:18,0:20:15.05:377,15,0	1/1:10,2:15:2.84:96,3,0	0/0:23,0:23:11.80:0,12,381	0/0:16,0:17:24.08:0,24,460	0/0:13,0:19:21.06:0,21,374	1/1:18,0:20:15.02:333,15,0	1/1:9,1:14:11.93:237,12,0	1/1:18,0:25:6.02:156,6,0	0/1:16,0:19:6.92:7,0,459	1/1:27,0:25:18.64:376,19,0	0/1:10,0:10:0:0,0,0	1/1:24,0:25:8.98:160,9,0	0/0:14,0:14:24.07:0,24,433	0/0:11,0:11:21.04:0,21,334	0/0:24,0:28:15.30:0,15,662	1/1:16,0:19:9:128,9,0	1/1:17,0:20:16.41:265,16,0	1/1:19,0:18:6.02:146,6,0	1/1:3,0:9:3.01:38,3,0
chr10	84521332	.	CTTTCATGT	C	2377.26	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.864;DP=769;FS=0.680;HRun=0;HaplotypeScore=189.5967;InbreedingCoeff=0.9998;MQ=66.16;MQ0=0;MQRankSum=-9.265;QD=62.56;ReadPosRankSum=0.547;VQSLOD=3.7005;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:99:0,132,5572	0/0:17,0:17:51.18:0,51,2189	0/0:21,0:21:60.21:0,60,2318	0/0:20,0:20:54.18:0,54,2113	0/0:22,0:22:54.18:0,54,2240	1/1:2,19:21:48.12:1264,48,0	0/0:32,0:32:84.29:0,84,3406	0/0:31,0:31:81.26:0,81,3165	0/0:30,0:30:87.28:0,87,3659	0/0:28,0:28:72.25:0,72,2996	0/0:15,0:15:39.13:0,39,1593	0/0:29,0:29:78.27:0,78,3412	0/0:19,0:19:54.19:0,54,2337	0/0:36,0:36:99:0,99,4229	0/0:43,0:43:99:0,123,5320	0/0:14,0:14:42.14:0,42,1738	0/0:53,0:53:99:0,154,6428	0/0:27,0:27:78.22:0,78,3250	0/0:23,0:23:63.22:0,63,2660	0/0:22,0:22:63.20:0,63,2559	0/0:66,0:66:99:0,184,7849	0/0:14,0:14:42.14:0,42,1649	0/0:13,0:13:36.05:0,36,1546	0/0:32,0:32:96.33:0,96,4025	1/1:0,17:17:45.15:1235,45,0	0/0:32,0:32:84.29:0,84,3625	0/0:24,0:24:72.23:0,72,2973	0/0:18,0:18:54.19:0,54,2358
chr10	84523118	.	GCACACACACA	G	5622.98	PASS	AB=0.760;AC=20;AF=0.370;AN=54;BaseQRankSum=4.846;DP=646;FS=0.475;HRun=0;HaplotypeScore=227.6679;InbreedingCoeff=0.6237;MQ=53.25;MQ0=18;MQRankSum=-6.836;QD=18.74;ReadPosRankSum=2.034;VQSLOD=3.4186;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,6:34:32.32:776,32,0	0/0:3,0:13:27.38:0,27,183	./.	0/0:37,0:17:3.01:0,3,69	0/0:21,0:21:45.15:0,45,1942	0/1:9,1:19:16.66:189,0,17	1/1:16,3:18:12.04:280,12,0	1/1:13,9:22:20.93:195,21,0	0/0:14,0:17:45.15:0,45,1652	0/1:18,0:30:18.79:19,0,268	0/0:6,0:15:10.96:0,11,50	0/0:20,0:21:50.75:0,51,2036	0/0:16,0:17:39.13:0,39,1363	0/0:12,0:16:33.11:0,33,1236	1/1:15,15:30:35.99:1082,36,0	0/0:6,0:19:21.32:0,21,143	0/1:16,1:25:14.73:15,0,67	0/0:14,0:29:56.50:0,57,1033	1/1:8,4:10:8.74:125,9,0	1/1:8,13:24:36.12:935,36,0	0/1:27,1:28:99:184,0,156	0/0:20,0:21:51.14:0,51,2034	0/0:14,0:13:27.07:0,27,991	0/0:31,0:32:63.22:0,63,2669	1/1:7,0:13:6.01:59,6,0	0/0:22,0:22:45.02:0,45,1431	1/1:16,21:37:58.43:1765,58,0	0/0:19,0:17:48.16:0,48,1870
chr10	84523120	.	A	ATG	1360.68	PASS	AB=0.558;AC=3;AF=0.054;AN=56;BaseQRankSum=-2.139;DP=665;FS=8.513;HRun=0;HaplotypeScore=176.7089;InbreedingCoeff=0.5640;MQ=52.00;MQ0=18;MQRankSum=1.352;QD=31.64;ReadPosRankSum=0.787;VQSLOD=4.5112;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:38:74.60:0,75,674	0/0:14,0:13:26.98:0,27,258	0/0:29,0:16:35.31:0,35,586	0/0:35,0:15:42.14:0,42,638	0/0:23,0:23:47.68:0,48,806	0/0:19,0:19:36.01:0,36,379	0/0:23,0:19:44.98:0,45,429	0/0:22,0:22:39.07:0,39,423	0/0:19,0:19:47.83:0,48,620	0/0:32,0:29:77.45:0,77,889	0/0:15,0:15:27.03:0,27,312	0/0:21,0:21:60.18:0,60,897	0/0:19,0:19:47.50:0,47,658	0/0:16,0:16:36.06:0,36,468	0/0:29,0:29:71.79:0,72,635	0/0:19,0:18:23.74:0,24,198	0/0:26,0:25:44.55:0,45,491	0/0:29,0:29:68.20:0,68,734	0/0:12,0:10:29.92:0,30,296	0/0:26,0:26:65.42:0,65,561	0/0:32,0:32:58.84:0,59,555	0/0:24,0:24:63.14:0,63,895	0/0:15,0:14:36.11:0,36,540	0/0:33,0:33:90.28:0,90,1345	0/0:12,0:12:24.05:0,24,324	0/1:5,18:23:39.70:808,0,40	0/0:38,0:38:96.81:0,97,840	1/1:9,10:17:7.04:648,7,0
chr10	84525035	.	C	CTT	1995.30	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=4.894;DP=482;FS=2.473;HRun=9;HaplotypeScore=61.3367;InbreedingCoeff=0.9554;MQ=63.58;MQ0=0;MQRankSum=1.286;QD=14.78;ReadPosRankSum=2.439;VQSLOD=1.1115;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:66.16:0,66,702	1/1:3,0:9:14.97:51,15,0	0/0:9,0:4:8.05:0,8,69	0/0:10,0:10:9.32:0,9,124	0/0:11,0:11:27.06:0,27,287	1/1:2,16:18:36.17:595,36,0	0/0:20,0:20:51.07:0,51,529	0/0:27,0:27:69.13:0,69,724	0/0:15,0:15:33.06:0,33,342	1/1:4,0:20:41.16:150,41,0	1/1:1,0:20:11:105,11,0	0/0:12,0:12:33.01:0,33,326	0/0:14,0:14:33.05:0,33,351	0/0:10,0:10:21.05:0,21,224	0/0:16,0:16:33.07:0,33,351	1/1:1,0:14:27.45:94,27,0	1/1:3,0:27:52.10:179,52,0	0/0:17,0:17:42.07:0,42,436	0/0:23,0:23:57.08:0,57,590	0/0:16,0:16:48.08:0,48,499	0/0:5,0:5:9.02:0,9,96	0/0:14,0:14:36.05:0,36,369	0/0:12,0:12:33.07:0,33,343	0/0:18,0:17:42.01:0,42,424	1/1:1,25:27:66.22:1016,66,0	0/0:28,0:28:71.39:0,71,740	0/0:26,0:26:75.19:0,75,796	0/0:11,0:11:24.05:0,24,255
chr10	84526240	.	C	CAAT	2054.10	PASS	AB=0.745;AC=24;AF=0.667;AN=36;BaseQRankSum=-3.484;DP=252;FS=0.000;HRun=0;HaplotypeScore=37.8454;InbreedingCoeff=0.4707;MQ=60.56;MQ0=2;MQRankSum=0.454;QD=14.26;ReadPosRankSum=-0.914;VQSLOD=2.8733;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:11:3.73:0,4,42	1/1:1,3:4:9.03:173,9,0	./.	./.	0/0:10,0:10:12.04:0,12,159	1/1:11,0:11:8.95:80,9,0	./.	1/1:22,0:18:5.98:60,6,0	./.	1/1:6,2:8:6.02:115,6,0	0/1:3,5:8:21.74:230,0,22	0/0:7,0:7:9.03:0,9,110	0/0:9,0:9:15.05:0,15,198	./.	1/1:3,2:6:3.01:58,3,0	1/1:3,4:7:6.02:115,6,0	1/1:11,22:33:33.10:917,33,0	0/0:18,0:19:39.08:0,39,481	1/1:6,1:6:3.01:58,3,0	0/1:6,1:7:33.70:52,0,34	./.	./.	./.	./.	./.	1/1:8,0:9:3.01:39,3,0	1/1:4,3:8:9.03:173,9,0	1/1:13,0:13:14.67:125,15,0
chr10	84526511	.	A	AT	502.09	PASS	AB=0.800;AC=11;AF=0.196;AN=56;BaseQRankSum=6.836;DP=268;FS=74.173;HRun=0;HaplotypeScore=37.3460;InbreedingCoeff=-0.2665;MQ=60.99;MQ0=0;MQRankSum=-5.800;QD=5.34;ReadPosRankSum=-2.248;VQSLOD=0.3418;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:66.19:0,66,888	0/0:2,0:1:6.01:0,6,67	0/0:10,0:8:24.08:0,24,324	0/0:9,0:7:12.19:0,12,142	0/0:7,0:7:21.07:0,21,294	0/0:13,0:13:36.09:0,36,468	0/0:8,0:8:24.08:0,24,331	0/0:22,0:22:66:0,66,877	0/1:3,5:8:99:213,0,102	0/1:9,4:13:99:152,0,310	0/0:3,0:3:9.03:0,9,126	0/1:4,1:5:35.54:36,0,114	0/1:3,1:4:38.68:39,0,58	0/1:5,1:6:33.33:33,0,118	0/0:6,0:6:15.05:0,15,210	0/0:2,0:2:6.02:0,6,84	0/1:27,2:29:17.04:17,0,926	0/0:14,0:14:42.14:0,42,580	0/0:10,0:9:26.76:0,27,346	0/1:1,1:2:35.77:41,0,36	0/1:7,2:9:26.72:27,0,213	0/0:2,0:2:6.02:0,6,84	0/1:2,1:3:38.62:39,0,75	0/1:5,1:6:32.49:32,0,153	0/1:8,1:9:20.55:21,0,308	0/0:15,0:15:45.14:0,45,615	0/0:11,0:11:33.11:0,33,461	0/0:16,0:16:48.06:0,48,609
chr10	84527606	.	A	AGCCT	452.90	PASS	AC=10;AF=0.238;AN=42;BaseQRankSum=-1.281;DP=238;FS=3.567;HRun=0;HaplotypeScore=57.0324;InbreedingCoeff=0.5651;MQ=56.57;MQ0=11;MQRankSum=2.024;QD=11.61;ReadPosRankSum=-0.557;VQSLOD=2.5527;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:5:3.01:0,3,30	./.	./.	0/0:6,0:3:3:0,3,25	0/0:1,0:1:3.01:0,3,45	./.	0/0:26,0:27:45.10:0,45,632	./.	0/0:11,0:11:18.06:0,18,283	1/1:4,0:3:5.99:93,6,0	1/1:0,1:1:3.01:72,3,0	0/0:16,0:15:27.09:0,27,428	0/0:5,0:5:6.02:0,6,96	0/0:12,0:12:26.99:0,27,317	0/0:8,0:8:3.01:0,3,48	1/1:6,1:6:10.42:112,10,0	1/1:8,10:16:12.04:289,12,0	0/0:16,0:15:19.95:0,20,285	0/0:8,0:5:2.96:0,3,48	./.	0/0:37,0:34:56.18:0,56,803	0/0:1,0:1:3.01:0,3,44	0/0:3,0:3:3.01:0,3,45	0/0:22,0:22:39.08:0,39,564	./.	1/1:9,0:9:3.37:17,3,0	0/0:5,0:4:8.99:0,9,75	./.
chr10	84527661	.	A	ACCTGC	148.91	PASS	AB=0.759;AC=2;AF=0.042;AN=48;BaseQRankSum=0.544;DP=327;FS=2.314;HRun=0;HaplotypeScore=64.9696;InbreedingCoeff=-0.0927;MQ=48.78;MQ0=23;MQRankSum=-2.338;QD=9.31;ReadPosRankSum=-1.012;VQSLOD=2.0040;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,2:5:52.52:153,0,53	0/0:3,0:3:6.02:0,6,99	0/0:19,0:5:0.08:0,0,146	0/0:12,0:2:5.99:0,6,76	0/0:3,0:3:6.02:0,6,123	./.	0/0:31,0:27:61.43:0,61,1189	0/0:4,0:3:9.03:0,9,127	0/0:8,0:8:14.99:0,15,229	0/0:5,0:5:12.03:0,12,211	./.	0/0:20,0:14:36.12:0,36,697	0/0:3,0:3:9.01:0,9,147	0/0:16,0:13:33.10:0,33,634	0/1:4,3:7:67.88:82,0,68	0/0:5,0:5:15.05:0,15,299	0/0:22,0:22:54.15:0,54,1054	0/0:19,0:18:46.71:0,47,898	0/0:10,0:3:9.03:0,9,160	./.	0/0:74,1:61:99:0,139,2824	0/0:2,0:2:6.02:0,6,122	0/0:2,0:2:6.01:0,6,84	0/0:29,0:25:69.24:0,69,1379	./.	0/0:8,0:7:21.07:0,21,405	0/0:12,0:12:34.91:0,35,642	0/0:3,0:3:9.01:0,9,140
chr10	84528035	.	G	GGA	478.11	PASS	AB=0.888;AC=9;AF=0.196;AN=46;BaseQRankSum=-2.995;DP=285;FS=0.000;HRun=0;HaplotypeScore=46.7552;InbreedingCoeff=0.0042;MQ=29.94;MQ0=45;MQRankSum=2.784;QD=5.56;ReadPosRankSum=-2.725;VQSLOD=1.7336;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:18.62:0,19,213	0/0:2,0:1:3:0,3,29	./.	./.	1/1:5,1:6:3.01:60,3,0	0/1:7,1:8:22.90:23,0,61	0/1:18,3:21:99:174,0,188	0/0:10,2:5:12.01:0,12,167	0/1:11,1:10:45.70:46,0,169	0/0:12,0:9:19.27:0,19,265	./.	0/0:19,0:15:18.63:0,19,249	0/0:14,0:13:29.07:0,29,430	0/0:13,0:10:9.03:0,9,137	0/0:5,0:4:7.78:0,8,69	0/1:14,2:14:99:108,0,349	0/0:14,0:12:21.07:0,21,330	0/0:14,0:10:18.06:0,18,296	0/1:9,1:7:41.07:41,0,195	0/1:2,0:2:0:0,0,0	0/0:19,3:18:0.41:0,0,1	0/0:7,0:6:11.96:0,12,168	0/0:2,0:2:2.90:0,3,37	0/0:25,0:25:35.33:0,35,557	./.	0/1:7,4:10:99:147,0,219	0/0:4,0:3:9.03:0,9,135	./.
chr10	84528801	.	C	CA	1000.54	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.421;DP=640;FS=0.000;HRun=1;HaplotypeScore=63.9470;InbreedingCoeff=0.9734;MQ=88.30;MQ0=0;MQRankSum=-1.482;QD=35.73;ReadPosRankSum=-0.103;VQSLOD=3.4486;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,1654	0/0:7,0:7:21.07:0,21,272	0/0:22,0:22:60.06:0,60,729	0/0:27,0:27:75.02:0,75,897	0/0:6,0:6:12.04:0,12,155	1/1:0,18:18:48.16:718,48,0	0/0:32,0:32:93.28:0,93,1189	0/0:28,0:28:84.27:0,84,1075	0/0:21,0:21:63.18:0,63,794	0/0:14,0:14:39.11:0,39,484	0/0:13,0:13:36.12:0,36,467	0/0:26,0:26:75.23:0,75,956	0/0:24,0:24:72.21:0,72,918	0/0:26,0:26:75.24:0,75,973	0/0:17,0:17:48.14:0,48,608	0/0:24,0:24:66.21:0,66,855	0/0:33,0:33:87.28:0,87,1128	0/0:20,0:20:57.17:0,57,725	0/0:27,0:27:80.84:0,81,1005	0/0:11,0:11:30.05:0,30,355	0/0:81,0:81:99:0,241,3056	0/0:11,0:11:33.08:0,33,399	0/0:6,0:6:15.03:0,15,178	0/0:32,0:32:96.29:0,96,1228	1/1:1,9:10:27.09:404,27,0	0/0:21,0:21:57.19:0,57,740	0/0:25,0:25:75.24:0,75,971	0/0:15,0:15:45.12:0,45,563
chr10	84529294	.	CTGAA	C	3157.55	PASS	AC=16;AF=0.308;AN=52;BaseQRankSum=6.537;DP=626;FS=4.599;HRun=0;HaplotypeScore=125.5861;InbreedingCoeff=0.9653;MQ=57.71;MQ0=4;MQRankSum=2.366;QD=16.03;ReadPosRankSum=3.455;VQSLOD=3.3045;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:18.09:165,18,0	1/1:6,6:12:18.06:278,18,0	./.	./.	0/0:29,0:29:57.16:0,57,1284	0/0:15,0:15:21.07:0,21,417	0/0:28,0:28:41.79:0,42,508	0/0:33,0:32:21.06:0,21,275	0/0:27,0:27:36.12:0,36,839	1/1:23,10:33:30.08:441,30,0	1/1:13,5:18:15.05:232,15,0	0/0:29,0:29:48.16:0,48,1107	0/0:22,0:22:30.10:0,30,670	0/0:23,0:24:51.18:0,51,1175	1/1:26,0:26:36.49:326,36,0	0/0:25,0:25:30.08:0,30,654	1/1:21,20:41:54.18:834,54,0	0/0:9,0:19:27.09:0,27,494	0/0:8,0:8:6.02:0,6,104	0/0:24,0:24:33.09:0,33,560	0/0:21,0:20:12.04:0,12,185	0/0:17,0:17:27.09:0,27,595	0/0:17,0:17:27.09:0,27,619	0/0:20,0:20:21.06:0,21,444	0/0:24,0:24:45.12:0,45,787	1/1:37,1:38:57.14:851,57,0	0/0:21,0:20:23.87:0,24,357	1/1:7,0:7:15.05:231,15,0
chr10	84529334	.	ATG	A	230.10	PASS	AB=0.789;AC=2;AF=0.036;AN=56;BaseQRankSum=12.442;DP=600;FS=2.911;HRun=0;HaplotypeScore=116.6386;InbreedingCoeff=-0.0525;MQ=58.77;MQ0=9;MQRankSum=0.031;QD=4.60;ReadPosRankSum=4.203;VQSLOD=2.0543;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,4:29:55.42:55,0,865	0/0:9,0:9:1.56:0,2,112	0/0:11,0:6:15.05:0,15,207	0/0:9,0:4:6.25:0,6,127	0/0:34,0:34:93.32:0,93,1698	0/0:16,0:16:48.16:0,48,822	0/0:26,0:26:72.23:0,72,1271	0/0:35,0:32:96.32:0,96,1554	0/0:20,0:20:60.20:0,60,1100	0/0:30,0:30:52.03:0,52,823	0/0:19,0:19:32.86:0,33,556	0/0:26,0:26:78.27:0,78,1414	0/0:20,0:20:60.20:0,60,1066	0/0:24,0:24:72.22:0,72,1304	0/1:12,9:21:99:263,0,196	0/0:17,0:17:51.17:0,51,933	0/0:31,0:31:7.55:0,8,376	0/0:19,0:19:48.16:0,48,730	0/0:19,0:16:48.16:0,48,937	0/0:16,0:16:45.15:0,45,811	0/0:14,0:13:39.13:0,39,643	0/0:16,0:16:48.16:0,48,852	0/0:16,0:15:45.15:0,45,828	0/0:17,0:17:51.17:0,51,881	0/0:24,0:24:69.03:0,69,1281	0/0:43,0:42:46.92:0,47,957	0/0:24,0:23:29.73:0,30,483	0/0:15,0:14:20.93:0,21,384
chr10	84529337	.	AATGAAT	A	851.52	PASS	AB=0.895;AC=4;AF=0.071;AN=56;BaseQRankSum=8.980;DP=607;FS=10.633;HRun=0;HaplotypeScore=162.1460;InbreedingCoeff=-0.0789;MQ=58.96;MQ0=9;MQRankSum=-1.768;QD=7.67;ReadPosRankSum=0.825;VQSLOD=2.1430;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,4:32:99:204,0,445	0/0:8,0:8:22.49:0,22,167	0/0:10,0:5:14.41:0,14,195	0/0:7,0:4:12.04:0,12,206	0/0:35,0:35:90.31:0,90,2625	0/0:16,0:16:44.87:0,45,737	0/0:27,0:27:74.90:0,75,1095	0/0:37,0:34:95.23:0,95,907	0/0:20,0:20:57.16:0,57,1626	0/0:28,0:28:78.38:0,78,996	0/0:20,0:20:51.60:0,52,644	0/0:26,0:26:78.27:0,78,2203	0/0:20,0:20:60.21:0,60,1560	0/0:22,0:22:66.21:0,66,2095	0/1:11,9:20:42.78:529,0,43	0/0:17,0:17:48.16:0,48,1328	0/0:32,0:32:82.45:0,82,741	0/0:20,0:20:51.17:0,51,1259	0/0:21,0:18:54.18:0,54,935	0/0:15,0:15:42.13:0,42,884	0/0:15,0:14:41.92:0,42,496	0/0:15,0:15:45.15:0,45,1179	0/0:18,0:17:51.17:0,51,1400	0/0:18,0:18:54.18:0,54,1279	0/0:24,0:24:66.08:0,66,1319	0/1:43,0:42:99:204,0,321	0/0:24,0:23:26.87:0,27,560	0/1:16,0:15:23.71:24,0,195
chr10	84529338	.	ATG	A	444.86	PASS	AB=0.879;AC=4;AF=0.071;AN=56;BaseQRankSum=10.852;DP=603;FS=3.963;HRun=0;HaplotypeScore=117.6833;InbreedingCoeff=-0.0719;MQ=59.00;MQ0=9;MQRankSum=0.934;QD=5.23;ReadPosRankSum=3.026;VQSLOD=2.9293;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:52.34:0,52,509	0/1:8,0:8:1.48:1,0,77	0/0:10,0:5:14.98:0,15,187	0/0:8,0:4:12.04:0,12,162	0/0:35,0:35:90.31:0,90,1654	0/0:16,0:16:44.71:0,45,577	0/0:28,0:28:77.64:0,78,982	0/0:37,0:34:99:0,100,933	0/0:19,0:19:57.16:0,57,1015	0/0:27,0:27:42.80:0,43,747	0/0:19,0:19:32.82:0,33,557	0/0:26,0:26:78.27:0,78,1413	0/0:20,0:20:60.20:0,60,1062	0/0:23,0:23:69.22:0,69,1278	0/1:18,0:18:29.39:29,0,84	0/0:17,0:17:51.17:0,51,920	0/0:32,0:32:10.58:0,11,444	0/0:20,0:20:51.17:0,51,773	0/0:21,0:18:54.18:0,54,801	0/0:16,0:16:45.15:0,45,756	0/0:15,0:14:41.27:0,41,471	0/0:15,0:15:45.15:0,45,804	0/0:18,0:17:51.17:0,51,916	0/0:18,0:18:54.18:0,54,915	0/0:23,0:23:65.79:0,66,1081	0/1:29,14:42:99:440,0,264	0/0:24,0:23:26.72:0,27,404	0/1:11,5:15:74.38:74,0,163
chr10	84529341	.	AAT	A	412.37	PASS	AB=0.882;AC=4;AF=0.071;AN=56;BaseQRankSum=8.408;DP=611;FS=8.806;HRun=0;HaplotypeScore=120.8866;InbreedingCoeff=-0.0707;MQ=59.15;MQ0=8;MQRankSum=-1.819;QD=3.62;ReadPosRankSum=0.037;VQSLOD=1.5990;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:36:0.90:1,0,533	0/0:8,0:8:13.50:0,13,113	0/0:9,0:5:14.41:0,14,195	0/0:8,0:4:12.04:0,12,196	0/0:34,0:34:90.31:0,90,1641	0/0:15,0:15:44.83:0,45,373	0/0:27,0:27:69.75:0,70,560	0/0:42,0:39:93.73:0,94,618	0/0:18,0:18:51.17:0,51,938	0/0:27,0:27:65.02:0,65,872	0/0:19,0:19:48.37:0,48,684	0/0:29,0:29:87.30:0,87,1536	0/0:21,0:21:60.20:0,60,1046	0/0:22,0:22:66.23:0,66,1214	0/1:18,0:18:74.85:139,0,75	0/0:18,0:18:54.18:0,54,953	0/0:32,0:32:55.54:0,56,580	0/0:20,0:20:54.18:0,54,831	0/0:22,0:20:60.07:0,60,583	0/0:15,0:15:44.49:0,44,386	0/0:15,0:14:32.61:0,33,249	0/0:15,0:15:42.14:0,42,734	0/0:19,0:18:54.18:0,54,957	0/0:17,0:17:51.17:0,51,889	0/0:23,0:23:56.79:0,57,521	0/1:29,14:42:99:313,0,353	0/0:22,0:21:20.67:0,21,148	0/1:12,5:16:59.97:60,0,186
chr10	84529343	.	T	TGAATGAAA	6179.50	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-2.616;DP=616;FS=16.460;HRun=0;HaplotypeScore=176.3417;InbreedingCoeff=0.4474;MQ=61.19;MQ0=4;MQRankSum=1.319;QD=19.81;ReadPosRankSum=-3.957;VQSLOD=2.2263;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:36:67.92:608,0,68	0/0:8,0:8:24.05:0,24,437	0/0:10,0:6:14.72:0,15,92	0/0:9,0:5:11.99:0,12,110	0/0:35,0:35:92.91:0,93,1669	0/1:15,0:15:99:172,0,284	1/1:21,0:28:74.88:862,75,0	1/1:35,0:33:96.09:905,96,0	0/0:19,0:19:51:0,51,971	0/0:27,0:27:80.92:0,81,949	0/0:19,0:19:56.85:0,57,688	0/0:29,0:29:86.98:0,87,1546	0/0:22,0:22:60.03:0,60,973	0/0:22,0:22:57.60:0,58,1464	0/1:18,0:18:99:187,0,265	0/0:20,0:20:54.05:0,54,914	0/0:32,0:32:86.97:0,87,1482	0/1:20,0:20:5.46:5,0,214	1/1:0,20:23:68.96:883,69,0	1/1:0,0:16:38.73:477,39,0	1/1:11,0:14:41.91:482,42,0	0/0:15,0:15:42:0,42,746	0/0:20,0:19:57.04:0,57,1009	0/0:17,0:17:50.85:0,51,729	0/1:23,0:23:99:166,0,526	0/1:44,0:43:99:536,0,402	1/1:1,18:22:14.63:667,15,0	0/1:16,0:16:99:229,0,115
chr10	84529733	.	A	AT	5084.28	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-9.846;DP=477;FS=4.498;HRun=8;HaplotypeScore=47.1700;InbreedingCoeff=0.8823;MQ=71.78;MQ0=0;MQRankSum=-2.542;QD=23.76;ReadPosRankSum=-1.678;VQSLOD=4.7578;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,40:43:99:1177,102,0	0/0:4,0:4:9:0,9,82	0/0:9,0:9:1.82:0,2,90	0/1:16,0:19:18.51:19,0,160	0/0:24,0:24:66.04:0,66,604	0/0:23,0:23:66.04:0,66,604	1/1:0,9:9:21.06:242,21,0	1/1:3,20:23:60.16:681,60,0	0/0:12,0:12:29.99:0,30,270	0/0:16,0:16:45.02:0,45,412	0/0:12,0:12:30.01:0,30,275	0/0:15,0:15:39.01:0,39,357	0/0:16,0:16:39.02:0,39,357	0/0:13,0:13:39.02:0,39,357	1/1:0,6:6:18.05:208,18,0	0/0:7,0:7:21:0,21,189	0/0:38,0:38:99:0,111,1002	0/0:22,0:22:56.99:0,57,513	1/1:7,13:20:39.12:450,39,0	1/1:2,18:20:57.12:639,57,0	1/1:1,18:19:45.13:519,45,0	0/0:8,0:8:24.01:0,24,219	0/0:17,0:17:45.02:0,45,412	0/0:13,0:13:30.01:0,30,275	0/0:14,0:14:39.01:0,39,352	1/1:7,14:21:17.67:457,18,0	1/1:5,17:22:39.12:450,39,0	1/1:0,11:11:21.06:242,21,0
chr10	84531358	.	ACACGCATG	A	1855.67	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=7.164;DP=847;FS=2.218;HRun=0;HaplotypeScore=214.5794;InbreedingCoeff=0.8921;MQ=55.20;MQ0=30;MQRankSum=-5.316;QD=19.53;ReadPosRankSum=-1.163;VQSLOD=2.7333;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:34:78.07:0,78,1860	1/1:1,16:17:2.84:85,3,0	0/0:43,0:19:47.93:0,48,1315	0/0:47,0:26:39.32:0,39,1121	0/0:24,0:24:72.16:0,72,2632	0/0:21,0:17:33.04:0,33,950	0/0:40,0:40:74.61:0,75,2527	0/0:40,0:40:90.50:0,90,3060	0/0:29,0:29:84.94:0,85,2924	1/1:1,20:21:63.11:1490,63,0	./.	0/0:30,0:30:81.15:0,81,3055	0/0:24,0:24:60.07:0,60,2174	0/0:27,0:27:72.01:0,72,2643	0/0:41,0:40:95.71:0,96,3142	1/1:1,27:28:3.37:40,3,0	1/1:2,27:29:16.87:380,17,0	0/0:34,0:34:89.75:0,90,2913	0/0:25,0:23:63.04:0,63,1671	0/0:24,0:19:48.14:0,48,1641	0/0:91,0:88:99:0,192,6955	0/0:18,0:18:51.13:0,51,1905	0/0:9,0:9:27.08:0,27,1025	0/0:34,0:34:90.14:0,90,2981	0/0:23,0:20:60.04:0,60,1767	0/0:34,0:30:53.22:0,53,2756	0/0:17,0:16:48.09:0,48,1813	0/0:12,0:12:24.08:0,24,924
chr10	84531410	.	GCA	G	4966.78	PASS	AB=0.613;AC=22;AF=0.393;AN=56;BaseQRankSum=6.025;DP=673;FS=7.323;HRun=0;HaplotypeScore=105.9644;InbreedingCoeff=0.8392;MQ=50.37;MQ0=35;MQRankSum=2.288;QD=16.95;ReadPosRankSum=-0.044;VQSLOD=4.4041;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:19:30.10:386,30,0	0/0:13,0:13:11.51:0,12,200	0/0:35,0:12:3.92:0,4,332	0/0:49,0:16:30.01:0,30,425	0/0:19,0:19:39.12:0,39,627	1/1:2,16:13:18.06:231,18,0	1/1:7,18:25:35.50:440,36,0	0/1:9,14:23:2.47:529,0,2	0/0:28,0:28:75.22:0,75,1202	0/0:19,0:19:48.07:0,48,718	0/0:17,0:17:13.29:0,13,205	0/0:21,1:21:17.28:0,17,580	0/0:21,0:20:42.11:0,42,652	0/0:19,0:19:33.08:0,33,504	1/1:7,16:22:24.08:309,24,0	0/0:18,0:18:11.76:0,12,202	0/0:24,0:24:45.10:0,45,726	0/0:22,0:20:51.14:0,51,817	1/1:5,8:12:24.05:291,24,0	1/1:7,12:14:18.04:217,18,0	1/1:20,41:58:69.22:888,69,0	0/0:24,1:25:30.59:0,31,1014	0/0:13,0:12:24.06:0,24,373	0/0:36,0:36:69.19:0,69,1089	1/1:9,14:18:30.09:373,30,0	0/1:9,17:22:58.80:385,0,59	1/1:9,17:25:54.12:650,54,0	1/1:0,11:11:21.07:269,21,0
chr10	84531429	.	CAGAG	C	1067.74	PASS	AB=0.816;AC=26;AF=0.542;AN=48;BaseQRankSum=1.580;DP=602;FS=9.093;HRun=0;HaplotypeScore=130.0942;InbreedingCoeff=0.0731;MQ=46.57;MQ0=45;MQRankSum=-2.806;QD=2.89;ReadPosRankSum=0.109;VQSLOD=1.7181;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:25:8.89:0,9,157	0/1:9,1:10:8.68:40,0,9	./.	./.	0/1:12,3:16:34.57:35,0,84	1/1:19,2:16:2.79:28,3,0	0/0:17,0:17:2.96:0,3,19	./.	0/1:19,1:22:15.88:38,0,16	1/1:15,1:17:6.01:74,6,0	0/1:13,2:17:7.64:40,0,8	0/1:15,2:16:32.23:32,0,118	0/1:11,1:18:25.28:35,0,25	0/0:13,0:13:11.75:0,12,104	0/0:14,0:14:6:0,6,89	1/1:14,1:17:8.88:73,9,0	1/1:17,7:24:14.83:228,15,0	0/0:21,0:21:17.09:0,17,141	1/1:8,0:11:12.01:110,12,0	0/1:13,0:18:0.03:0,0,0	./.	0/1:24,2:28:31.83:32,0,93	1/1:7,3:10:5.99:93,6,0	0/1:25,1:43:29.58:30,0,73	1/1:15,7:18:9.03:139,9,0	0/1:23,1:21:19.30:19,0,474	1/1:16,0:19:19.58:179,20,0	0/0:8,0:8:6.02:0,6,90
chr10	84533162	.	A	AT	7874.04	PASS	AB=0.923;AC=25;AF=0.446;AN=56;BaseQRankSum=-13.885;DP=667;FS=12.326;HRun=10;HaplotypeScore=65.2324;InbreedingCoeff=0.9285;MQ=74.68;MQ0=0;MQRankSum=-1.698;QD=22.82;ReadPosRankSum=0.343;VQSLOD=4.8492;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,50:61:94.91:1405,95,0	0/0:8,0:8:23.96:0,24,194	0/0:19,0:19:3.86:0,4,145	0/0:12,0:12:14.88:0,15,118	0/0:27,0:28:67.86:0,68,538	1/1:1,24:24:66.17:704,66,0	1/1:1,22:24:66:686,66,0	1/1:8,14:22:39.10:416,39,0	0/0:26,1:27:36.84:0,37,497	0/0:23,0:23:65.92:0,66,541	0/0:20,0:21:55.97:0,56,449	0/0:26,0:26:68.91:0,69,567	0/0:15,1:16:15.96:0,16,337	0/0:15,0:15:35.93:0,36,292	1/1:5,30:35:56.45:778,56,0	0/0:32,0:32:89.86:0,90,736	0/0:27,0:27:62.87:0,63,513	0/1:21,2:24:2.03:2,0,383	1/1:8,17:25:35.32:485,35,0	1/1:1,22:25:71.84:726,72,0	1/1:3,14:17:17.46:391,17,0	0/0:35,0:35:86.84:0,87,711	0/0:13,0:13:35.95:0,36,296	0/0:20,0:20:50.92:0,51,416	1/1:3,22:25:41.52:647,42,0	1/1:5,21:26:63.13:660,63,0	1/1:2,24:27:50.37:719,50,0	1/1:0,9:9:24.06:256,24,0
chr10	84533485	.	A	ACACAGAGAAAC	42452.13	PASS	AB=0.587;AC=23;AF=0.411;AN=56;BaseQRankSum=-6.150;DP=775;FS=0.275;HRun=0;HaplotypeScore=232.6615;InbreedingCoeff=0.9414;MQ=67.18;MQ0=0;MQRankSum=-20.359;QD=123.41;ReadPosRankSum=-3.414;VQSLOD=4.1958;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,23:48:99:5243,102,0	0/0:12,0:12:36.12:0,36,1306	0/0:29,0:28:84.29:0,84,2620	0/0:32,0:32:84.26:0,84,2621	0/0:30,0:30:87.30:0,87,3028	1/1:12,12:24:63.22:2817,63,0	1/1:12,12:28:66.18:3248,66,0	1/1:31,10:47:99:6029,129,0	0/0:31,0:31:93.32:0,93,3268	0/0:43,0:43:99:0,123,4032	0/0:17,0:17:48.16:0,48,1711	0/0:32,0:32:93.31:0,93,3236	0/0:24,0:24:72.25:0,72,2612	0/0:19,0:19:57.20:0,57,1982	1/1:14,25:42:99:5793,111,0	0/0:31,0:31:93.30:0,93,3117	0/0:27,0:27:78.27:0,78,2618	0/0:29,0:29:81.28:0,81,2769	1/1:13,5:21:57.19:2111,57,0	1/1:8,20:32:81.28:3691,81,0	1/1:15,7:24:51.17:2513,51,0	0/0:21,0:21:63.21:0,63,2057	0/0:28,0:28:75.24:0,75,2531	0/0:26,0:26:78.25:0,78,2570	1/1:10,6:17:44.86:2010,45,0	0/1:8,16:27:5.80:3836,0,6	1/1:5,17:24:69.24:3765,69,0	1/1:2,8:10:24.08:1396,24,0
chr10	84535605	.	TC	T	850.18	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.310;DP=537;FS=1.533;HRun=4;HaplotypeScore=57.0585;InbreedingCoeff=0.9639;MQ=85.91;MQ0=0;MQRankSum=-1.325;QD=25.76;ReadPosRankSum=1.355;VQSLOD=2.4490;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,1701	0/0:6,0:6:15.05:0,15,210	0/0:17,0:17:12.87:0,13,491	0/0:23,0:22:38.34:0,38,544	0/0:11,0:11:30.10:0,30,420	1/1:1,15:16:36.11:432,36,0	0/0:15,0:15:42.14:0,42,587	0/0:27,0:27:72.24:0,72,1008	0/0:26,0:26:78.25:0,78,1074	0/0:13,0:13:30.10:0,30,411	0/0:12,0:12:36.12:0,36,501	0/0:27,0:27:81.27:0,81,1131	0/0:16,0:16:45.15:0,45,629	0/0:20,0:20:57.18:0,57,778	0/0:14,0:14:36.12:0,36,504	0/0:10,0:10:27.08:0,27,362	0/0:37,0:37:99:0,102,1428	0/0:27,0:27:75.25:0,75,1047	0/0:20,0:20:57.17:0,57,765	0/0:6,0:6:15.05:0,15,210	0/0:45,0:45:99:0,126,1762	0/0:7,0:7:18.02:0,18,229	0/0:13,0:13:39.11:0,39,527	0/0:26,0:26:69.23:0,69,966	1/1:0,17:17:45.14:540,45,0	0/0:25,0:25:75.25:0,75,1050	0/0:7,0:7:21.07:0,21,291	0/0:12,0:12:36.12:0,36,504
chr10	84536357	.	TCACACA	T	603.30	PASS	AB=0.786;AC=15;AF=0.341;AN=44;BaseQRankSum=4.753;DP=423;FS=8.689;HRun=0;HaplotypeScore=86.1075;InbreedingCoeff=0.5456;MQ=67.11;MQ0=15;MQRankSum=-4.381;QD=5.29;ReadPosRankSum=-0.101;VQSLOD=1.0304;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:27:5.15:0,5,91	./.	./.	./.	0/0:19,0:19:14.69:0,15,271	0/0:13,0:12:3.01:0,3,42	1/1:19,0:18:3.01:50,3,0	0/0:20,0:18:0.62:0,1,2	0/0:9,0:9:9.03:0,9,246	./.	1/1:10,1:11:3.01:60,3,0	0/0:12,0:12:9.50:0,10,280	0/0:9,0:9:15.05:0,15,456	0/0:8,0:8:9.03:0,9,216	0/0:6,0:9:3.01:0,3,78	1/1:12,3:14:11.49:128,11,0	1/1:19,7:26:8.90:179,9,0	0/0:11,0:11:12.04:0,12,238	./.	1/1:5,2:7:6.02:118,6,0	./.	0/0:9,0:9:6.02:0,6,125	0/0:12,0:12:9.03:0,9,202	0/0:29,0:29:17.01:0,17,336	0/0:17,0:16:12.04:0,12,326	1/1:14,0:18:3.01:42,3,0	0/1:8,3:10:15.31:88,0,15	1/1:5,0:7:6.02:84,6,0
chr10	84536732	.	A	ATT	1638.69	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.856;DP=629;FS=5.880;HRun=9;HaplotypeScore=85.6866;InbreedingCoeff=0.9202;MQ=66.55;MQ0=1;MQRankSum=-0.156;QD=33.44;ReadPosRankSum=-0.787;VQSLOD=3.5001;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:53:99:0,123,1341	0/0:4,0:4:12.03:0,12,128	0/0:16,0:13:15.57:0,16,202	0/0:14,0:13:15.02:0,15,119	0/0:27,0:27:66.14:0,66,702	1/1:2,22:25:62.70:929,63,0	0/0:22,0:23:59.86:0,60,609	0/0:36,0:36:93.17:0,93,963	0/0:25,0:25:66.07:0,66,680	0/0:20,0:20:54.10:0,54,568	0/0:21,0:21:54.90:0,55,553	0/0:26,0:26:66.14:0,66,701	0/0:20,0:20:57.12:0,57,598	0/0:19,0:19:48.08:0,48,502	0/0:26,0:26:60.10:0,60,620	0/0:26,0:26:60.05:0,60,616	0/0:46,0:46:99:0,117,1221	0/0:18,0:18:51.13:0,51,542	0/0:21,0:22:48.05:0,48,554	0/0:15,0:15:39.09:0,39,414	0/0:22,0:22:60.12:0,60,628	0/0:11,0:12:32.82:0,33,331	0/0:16,0:15:33.07:0,33,351	0/0:33,0:33:93.19:0,93,977	1/1:1,23:24:54.18:831,54,0	0/0:14,0:14:39.09:0,39,414	0/0:24,0:24:63.07:0,63,654	0/0:2,0:2:6.02:0,6,64
chr10	84536817	.	GC	G	21489.47	PASS	AB=0.800;AC=55;AF=0.982;AN=56;BaseQRankSum=-3.439;DP=593;FS=5.291;HRun=1;HaplotypeScore=82.9770;InbreedingCoeff=-0.0217;MQ=61.20;MQ0=5;MQRankSum=-1.778;QD=36.24;ReadPosRankSum=2.468;VQSLOD=5.2421;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,35:37:93.30:1276,93,0	1/1:0,12:12:36.12:502,36,0	1/1:11,4:6:11.35:167,11,0	0/1:9,3:7:44.82:100,0,45	1/1:1,15:16:36.08:478,36,0	1/1:0,17:17:42.14:585,42,0	1/1:0,25:25:63.21:881,63,0	1/1:0,24:24:69.16:908,69,0	1/1:1,23:24:72.24:999,72,0	1/1:0,12:12:36.10:483,36,0	1/1:2,7:9:24.07:315,24,0	1/1:1,30:31:87.29:1213,87,0	1/1:0,18:18:51.17:713,51,0	1/1:0,18:18:48.16:668,48,0	1/1:0,33:33:96.32:1343,96,0	1/1:0,39:39:99:1636,117,0	1/1:0,36:36:99:1468,105,0	1/1:0,24:24:63.17:859,63,0	1/1:1,18:19:9.88:549,10,0	1/1:1,15:15:36.08:481,36,0	1/1:0,37:37:99:1468,105,0	1/1:0,12:12:27.09:377,27,0	1/1:0,11:11:27.09:377,27,0	1/1:0,45:45:99:1804,129,0	1/1:1,9:10:24.08:335,24,0	1/1:0,14:13:36.12:501,36,0	1/1:0,20:20:54.18:755,54,0	1/1:0,6:6:18.06:251,18,0
chr10	84537966	.	A	AT	4723.80	PASS	AB=0.790;AC=28;AF=0.500;AN=56;BaseQRankSum=-2.385;DP=568;FS=3.219;HRun=12;HaplotypeScore=64.5549;InbreedingCoeff=0.7942;MQ=67.15;MQ0=3;MQRankSum=-0.591;QD=13.50;ReadPosRankSum=-1.523;VQSLOD=4.7702;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,36:47:69.57:774,70,0	1/1:5,11:16:39.06:378,39,0	0/1:14,0:10:1.18:1,0,39	0/0:10,0:8:16.43:0,16,85	0/0:24,1:25:27.36:0,27,362	1/1:1,17:18:36.06:350,36,0	1/1:7,1:18:38.34:203,38,0	1/1:7,1:30:63.62:371,64,0	0/0:13,0:13:23.31:0,23,161	1/1:8,12:20:33.04:316,33,0	0/1:4,12:16:1.61:245,0,2	0/0:17,0:18:12.09:0,12,221	0/0:15,0:15:35.78:0,36,263	0/0:12,0:12:29.63:0,30,209	0/0:23,0:23:50.64:0,51,370	1/1:4,21:27:12.94:423,13,0	1/1:4,24:28:55.89:678,56,0	0/0:28,0:28:67.27:0,67,473	1/1:3,0:12:28.58:153,29,0	1/1:8,1:26:57.49:328,57,0	0/1:5,1:9:0:0,0,0	0/0:13,2:15:3.54:0,4,184	0/1:16,2:18:10.65:11,0,258	0/0:21,0:21:56.64:0,57,416	1/1:7,19:26:34.66:361,35,0	0/0:27,1:29:26.43:0,26,342	1/1:5,1:22:25.67:132,26,0	0/0:7,0:7:17.87:0,18,131
chr10	84542455	.	GAC	G	220.98	PASS	AB=1.000;AC=23;AF=0.426;AN=54;BaseQRankSum=1.255;DP=138;FS=16.025;HRun=0;HaplotypeScore=29.2735;InbreedingCoeff=0.3516;MQ=85.51;MQ0=2;MQRankSum=-1.265;QD=3.62;ReadPosRankSum=-0.740;VQSLOD=-0.3244;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:9:17.06:20,0,17	1/1:2,0:2:2.99:23,3,0	0/1:10,0:9:5.88:6,0,89	0/0:15,0:10:18.48:0,18,239	0/0:2,0:2:6.02:0,6,101	1/1:2,3:5:8.38:74,8,0	0/1:6,0:6:32.71:33,0,41	1/1:2,0:2:3:28,3,0	0/0:7,0:7:14.63:0,15,215	0/1:1,0:1:0:0,0,0	0/1:1,0:1:0:0,0,0	0/0:10,0:10:24.08:0,24,388	0/0:4,0:4:9.03:0,9,147	0/0:4,0:4:12.01:0,12,149	1/1:3,1:4:6.02:78,6,0	0/1:4,0:4:13.62:14,0,24	1/1:5,0:5:3.45:23,3,0	0/0:8,0:8:12.84:0,13,228	1/1:2,0:2:3.85:21,4,0	0/1:2,0:2:0:0,0,0	0/0:9,0:8:1.97:0,2,50	0/0:5,0:5:9.03:0,9,144	0/0:4,0:4:12.04:0,12,197	0/0:4,0:4:6.02:0,6,93	1/1:1,2:3:3.01:39,3,0	1/1:4,0:4:4.74:17,5,0	0/0:5,0:5:2.97:0,3,20	./.
chr10	84542463	.	CA	C	488.23	PASS	AB=0.952;AC=25;AF=0.481;AN=52;BaseQRankSum=0.217;DP=143;FS=0.863;HRun=1;HaplotypeScore=28.9946;InbreedingCoeff=0.4828;MQ=96.35;MQ0=2;MQRankSum=-0.892;QD=8.72;ReadPosRankSum=-1.833;VQSLOD=0.3312;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:1.64:24,2,0	1/1:2,0:2:2.99:24,3,0	0/0:16,0:14:12.44:0,12,172	0/0:14,0:9:20.59:0,21,210	0/0:3,0:3:8.82:0,9,96	0/1:5,1:6:13.98:69,0,14	1/1:6,0:6:7.93:72,8,0	1/1:2,0:2:3:28,3,0	0/0:6,0:6:15.50:0,16,186	1/1:1,0:1:2.97:20,3,0	./.	0/0:11,0:11:33.04:0,33,380	0/0:4,0:4:12.01:0,12,138	0/0:4,0:4:12.02:0,12,149	0/1:4,0:4:14.98:15,0,40	1/1:4,0:4:6.62:33,7,0	1/1:3,0:3:5.17:40,5,0	0/0:11,0:11:12.23:0,12,265	1/1:3,0:3:3.19:42,3,0	1/1:2,0:2:2.99:24,3,0	1/1:8,2:9:0.67:78,1,0	0/0:3,0:3:9.03:0,9,111	0/0:5,0:5:15.04:0,15,189	0/0:4,0:4:11.98:0,12,129	0/1:4,0:4:6.02:6,0,8	1/1:0,5:5:15.04:181,15,0	0/0:5,0:5:0.17:0,0,0	./.
chr10	84544070	.	AATAT	A	1698.31	PASS	AC=14;AF=0.280;AN=50;BaseQRankSum=3.376;DP=203;FS=11.885;HRun=0;HaplotypeScore=47.0528;InbreedingCoeff=0.7350;MQ=77.78;MQ0=0;MQRankSum=-5.451;QD=28.78;ReadPosRankSum=-1.145;VQSLOD=1.9096;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:27.09:0,27,625	0/0:4,0:4:12.04:0,12,306	./.	0/0:7,0:5:6:0,6,58	0/0:7,0:7:18.06:0,18,452	./.	1/1:3,1:4:3.01:53,3,0	1/1:9,18:27:51.16:866,51,0	0/0:2,0:2:6.02:0,6,153	0/0:5,0:5:12.04:0,12,304	0/0:5,0:5:15.05:0,15,383	0/0:6,0:6:15.05:0,15,383	0/0:5,0:5:12.04:0,12,291	0/0:4,0:4:12.04:0,12,306	1/1:1,0:1:3.01:48,3,0	0/0:7,0:7:18.06:0,18,454	0/0:18,0:18:48.15:0,48,1171	0/0:27,0:27:72.25:0,72,1780	1/1:5,10:15:30.10:526,30,0	1/1:1,2:3:6.02:88,6,0	1/1:2,3:4:5.83:88,6,0	./.	0/0:4,0:4:3.01:0,3,77	0/0:3,0:3:9.03:0,9,230	0/0:0,0:5:11.19:0,11,51	0/0:3,0:8:16.59:0,17,74	1/1:0,4:4:12.04:194,12,0	0/0:1,0:2:2.80:0,3,13
chr10	84544100	.	G	GA	317.93	PASS	AB=1.000;AC=4;AF=0.091;AN=44;BaseQRankSum=3.267;DP=159;FS=0.000;HRun=6;HaplotypeScore=45.9056;InbreedingCoeff=0.3034;MQ=79.31;MQ0=0;MQRankSum=-2.326;QD=9.35;ReadPosRankSum=-1.852;VQSLOD=-0.2598;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:38.89:399,39,0	0/0:3,0:3:9.02:0,9,92	0/1:4,0:2:0:0,0,0	0/1:13,0:13:18.63:19,0,43	0/0:9,0:9:24.04:0,24,238	./.	0/0:1,0:1:3.01:0,3,31	0/0:14,0:14:33.06:0,33,331	0/0:5,0:5:15.03:0,15,153	0/0:3,0:3:9.02:0,9,92	0/0:2,0:2:6.01:0,6,61	0/0:7,0:7:21.05:0,21,214	0/0:7,0:7:21.04:0,21,212	0/0:2,0:2:3.01:0,3,31	./.	0/0:3,0:3:9.02:0,9,92	0/0:18,0:18:47.81:0,48,448	0/0:25,0:25:72.16:0,72,734	0/0:12,0:12:30.06:0,30,305	0/0:1,0:1:3.01:0,3,31	./.	./.	0/0:1,0:1:3.01:0,3,31	0/0:2,0:2:6.01:0,6,61	./.	0/0:4,0:4:9.02:0,9,92	./.	0/0:2,0:2:3.01:0,3,31
chr10	84544112	.	ATGCT	A	206.34	PASS	AB=0.880;AC=5;AF=0.114;AN=44;BaseQRankSum=3.110;DP=157;FS=0.000;HRun=0;HaplotypeScore=53.8445;InbreedingCoeff=-0.1990;MQ=86.94;MQ0=0;MQRankSum=-3.793;QD=5.03;ReadPosRankSum=-0.275;VQSLOD=0.7102;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:53.89:171,0,54	0/0:3,0:3:9.03:0,9,185	0/0:5,0:3:3.01:0,3,39	0/0:17,0:15:7.23:0,7,273	0/0:10,0:10:30.10:0,30,819	./.	0/0:1,0:1:2.96:0,3,19	0/1:8,1:9:29.01:29,0,211	0/0:5,0:5:15.05:0,15,420	0/0:3,0:3:9.02:0,9,138	0/0:2,0:2:6.02:0,6,117	0/0:6,0:6:18.06:0,18,495	0/0:7,0:7:21.07:0,21,538	0/0:2,0:2:6.02:0,6,168	./.	0/1:4,1:5:37.46:37,0,280	0/0:17,0:17:48.16:0,48,927	0/0:28,0:28:84.27:0,84,2081	0/1:10,0:10:29.39:29,0,374	0/0:1,0:1:3:0,3,25	./.	./.	0/0:1,0:1:3.01:0,3,84	0/0:3,0:3:9.03:0,9,241	./.	0/0:3,0:3:9.03:0,9,190	./.	0/1:1,1:2:47.71:48,0,68
chr10	84544115	.	CTTATATAT	C	636.52	PASS	AB=1.000;AC=4;AF=0.091;AN=44;BaseQRankSum=1.628;DP=151;FS=12.985;HRun=0;HaplotypeScore=62.8708;InbreedingCoeff=0.1854;MQ=88.11;MQ0=0;MQRankSum=-1.551;QD=28.93;ReadPosRankSum=-1.572;VQSLOD=1.6371;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,7:14:29.98:692,30,0	0/0:3,0:3:9.02:0,9,257	0/0:5,0:3:3.01:0,3,43	0/0:17,0:15:22.40:0,22,372	0/0:10,0:10:30.10:0,30,1359	./.	0/0:1,0:1:2.98:0,3,21	0/1:6,0:6:32.91:33,0,197	0/0:5,0:5:15.05:0,15,694	0/0:2,0:2:5.98:0,6,129	0/0:2,0:2:5.98:0,6,143	0/0:6,0:6:18.05:0,18,720	0/0:7,0:7:21.07:0,21,940	0/0:2,0:2:6.02:0,6,278	./.	0/0:5,0:5:15.02:0,15,396	0/0:16,0:16:48.01:0,48,1279	0/0:27,0:27:81.14:0,81,2920	0/0:8,0:10:2.72:0,3,619	0/1:2,0:2:15.49:19,0,15	./.	./.	0/0:1,0:1:3.01:0,3,124	0/0:3,0:3:9.03:0,9,401	./.	0/0:3,0:3:8.94:0,9,133	./.	0/0:2,0:2:4.26:0,4,63
chr10	84544964	.	TGGGCGCG	T	778.75	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.837;DP=449;FS=0.000;HRun=0;HaplotypeScore=109.3417;InbreedingCoeff=0.7902;MQ=71.17;MQ0=0;MQRankSum=-5.732;QD=55.63;ReadPosRankSum=1.234;VQSLOD=3.6835;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:45.15:0,45,1861	0/0:3,0:3:9.03:0,9,321	0/0:7,0:7:21.04:0,21,581	0/0:5,0:5:15:0,15,402	0/0:13,0:13:39.11:0,39,1375	0/0:12,0:12:33.11:0,33,1222	0/0:32,0:32:87.10:0,87,3015	0/0:19,0:19:51.14:0,51,1687	0/0:13,0:13:39.10:0,39,1377	0/0:20,0:20:57.15:0,57,1915	0/0:4,0:4:9.01:0,9,273	0/0:20,0:20:60.19:0,60,2310	0/0:13,0:13:39.02:0,39,1321	0/0:27,0:27:78.23:0,78,2673	1/1:1,13:14:42.13:873,42,0	0/0:14,0:14:42.12:0,42,1554	0/0:44,0:44:99:0,129,5248	0/0:16,0:16:48.14:0,48,1907	0/0:8,0:8:21.04:0,21,583	0/0:8,0:8:20.96:0,21,755	0/0:50,0:50:99:0,144,5279	0/0:10,0:10:30.09:0,30,1036	0/0:3,0:3:9.03:0,9,377	0/0:26,0:26:77.90:0,78,2830	0/0:13,0:13:39.13:0,39,1351	0/0:17,0:17:51.15:0,51,1819	0/0:16,0:16:45.14:0,45,1778	0/0:3,0:3:9.03:0,9,307
chr10	84544972	.	AGGC	A	348.68	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.083;DP=433;FS=1.045;HRun=0;HaplotypeScore=73.0588;InbreedingCoeff=0.7762;MQ=68.39;MQ0=0;MQRankSum=-6.024;QD=26.82;ReadPosRankSum=1.232;VQSLOD=3.5454;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:51.17:0,51,1165	0/0:4,0:4:12:0,12,233	0/0:5,0:5:12.01:0,12,212	0/0:4,0:4:9.03:0,9,196	0/0:11,0:11:33.10:0,33,697	0/0:11,0:11:27.09:0,27,600	0/0:31,0:31:81.23:0,81,1731	0/0:22,0:22:39.12:0,39,808	0/0:13,0:13:39.13:0,39,851	0/0:16,0:16:42.14:0,42,933	0/0:4,0:4:9.03:0,9,212	0/0:21,0:21:60.15:0,60,1363	0/0:10,0:10:30.10:0,30,709	0/0:23,0:23:60.19:0,60,1367	1/1:0,13:13:39.11:443,39,0	0/0:14,0:14:42.14:0,42,992	0/0:46,0:46:99:0,135,3057	0/0:16,0:16:48.16:0,48,1103	0/0:6,0:6:18.06:0,18,392	0/0:7,0:7:20.96:0,21,424	0/0:53,0:53:99:0,144,3172	0/0:9,0:9:27.08:0,27,584	0/0:3,0:3:9.03:0,9,212	0/0:24,0:24:69.22:0,69,1582	0/0:11,0:11:30.09:0,30,662	0/0:15,0:15:45.15:0,45,1039	0/0:16,0:16:45.15:0,45,1055	0/0:5,0:5:11.87:0,12,176
chr10	84545013	.	A	AG	5917.23	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-10.975;DP=442;FS=0.378;HRun=5;HaplotypeScore=50.4282;InbreedingCoeff=0.9343;MQ=67.67;MQ0=0;MQRankSum=-2.515;QD=31.64;ReadPosRankSum=-1.126;VQSLOD=4.7513;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:51.17:671,51,0	0/0:3,0:3:9.02:0,9,97	0/0:5,1:5:2.95:0,3,94	0/0:11,0:11:29.80:0,30,290	0/0:3,0:3:3.01:0,3,32	1/1:1,11:12:30.10:394,30,0	1/1:3,28:31:75.24:987,75,0	1/1:1,11:12:30.08:371,30,0	0/0:9,0:9:27.07:0,27,289	0/0:14,0:14:33.07:0,33,349	0/0:8,0:8:21.05:0,21,225	0/0:22,0:22:66.17:0,66,709	0/0:15,0:15:36.09:0,36,387	0/0:18,0:18:48.12:0,48,515	1/1:1,8:9:24.08:315,24,0	0/0:19,0:19:54.13:0,54,580	0/0:45,0:45:99:0,123,1313	0/0:19,0:19:51.12:0,51,547	1/1:2,9:11:27.02:318,27,0	1/1:1,5:6:15.05:197,15,0	1/1:6,50:56:99:1758,135,0	0/0:9,0:9:24.06:0,24,257	0/0:9,0:9:18.04:0,18,193	0/0:22,0:22:63.16:0,63,676	1/1:0,8:8:24.08:316,24,0	0/0:15,0:15:42.11:0,42,451	1/1:0,18:18:43.97:590,44,0	0/0:8,0:8:24.06:0,24,258
chr10	84546714	.	TTTAAGAGAAGGAGACTGC	T	6183.44	PASS	AB=0.519;AC=9;AF=0.161;AN=56;BaseQRankSum=10.840;DP=681;FS=1.156;HRun=0;HaplotypeScore=306.1358;InbreedingCoeff=0.8338;MQ=81.72;MQ0=0;MQRankSum=-8.492;QD=69.48;ReadPosRankSum=2.369;VQSLOD=4.0375;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,154,12374	1/1:0,8:8:18.06:946,18,0	0/0:22,0:22:51.22:0,51,3743	0/0:25,0:25:60.24:0,60,3935	0/0:24,0:24:72.25:0,72,5543	0/0:16,0:16:39.10:0,39,2584	0/0:27,0:27:81.25:0,81,5905	0/0:34,0:34:93.32:0,93,7099	0/0:21,0:21:60.21:0,60,4323	1/1:0,17:17:39.13:1428,39,0	1/1:1,10:11:5.98:178,6,0	0/0:41,0:41:99:0,117,9340	0/0:25,0:25:75.26:0,75,5418	0/0:39,0:39:99:0,117,8865	0/0:30,0:30:90.30:0,90,7068	0/1:2,26:28:99:2568,0,145	1/1:0,25:25:21.07:1063,21,0	0/0:25,0:25:75.21:0,75,5244	0/0:18,0:18:51.14:0,51,3182	0/0:17,0:17:51.13:0,51,3131	0/0:44,0:44:99:0,132,10031	0/0:15,0:15:45.15:0,45,3297	0/0:13,0:13:39.13:0,39,3135	0/0:30,0:29:87.77:0,88,7102	0/0:14,0:14:33.11:0,33,2094	0/0:22,0:21:23.30:0,23,4437	0/0:27,0:27:81.28:0,81,5913	0/0:12,0:12:36.12:0,36,2991
chr10	84546734	.	C	CCAGAGG	613.28	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.865;DP=644;FS=2.934;HRun=0;HaplotypeScore=173.2306;InbreedingCoeff=0.9387;MQ=77.63;MQ0=0;MQRankSum=-4.280;QD=24.53;ReadPosRankSum=-1.625;VQSLOD=3.4299;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,102,1758	0/0:8,0:8:18.06:0,18,357	0/0:23,0:23:33.11:0,33,626	0/0:25,0:25:48.11:0,48,947	0/0:22,0:22:48.10:0,48,798	1/1:8,7:15:11.94:322,12,0	0/0:21,0:21:51.16:0,51,1049	0/0:35,0:35:54.15:0,54,1003	0/0:18,0:18:39.12:0,39,771	0/0:22,0:22:35:0,35,413	0/0:13,0:13:11.86:0,12,172	0/0:42,0:42:99:0,105,2172	0/0:22,0:22:54.15:0,54,1034	0/0:35,0:35:78.24:0,78,1599	0/0:34,0:34:78.25:0,78,1610	0/0:29,0:29:54.16:0,54,930	0/0:30,0:30:32.94:0,33,496	0/0:22,0:22:54.15:0,54,1060	0/0:16,0:16:31.32:0,31,585	0/0:11,0:11:19.58:0,20,275	0/0:38,0:38:95.36:0,95,1800	0/0:12,0:12:18.04:0,18,311	0/0:13,0:13:27.03:0,27,405	0/0:27,0:26:63.22:0,63,1346	1/1:4,6:10:12.04:402,12,0	0/0:17,0:17:39.09:0,39,681	0/0:25,0:25:60.16:0,60,1126	0/0:12,0:12:30.10:0,30,642
chr10	84547016	.	G	GA	3613.39	PASS	AB=0.855;AC=21;AF=0.375;AN=56;BaseQRankSum=-8.654;DP=648;FS=16.334;HRun=12;HaplotypeScore=76.9471;InbreedingCoeff=0.5730;MQ=81.12;MQ0=2;MQRankSum=-0.506;QD=11.43;ReadPosRankSum=1.154;VQSLOD=1.5574;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,33:41:71.46:641,71,0	1/1:1,6:7:15.02:145,15,0	0/0:46,0:34:16.68:0,17,190	0/0:23,0:14:8.66:0,9,74	0/0:29,0:29:68.50:0,68,486	0/1:4,15:19:17.65:331,0,18	0/0:19,1:21:8.54:0,9,217	0/0:31,1:32:25.45:0,25,293	0/0:15,0:16:31.78:0,32,222	1/1:4,15:20:35.87:328,36,0	1/1:0,8:11:23.71:204,24,0	0/1:25,1:27:8.60:9,0,262	0/0:17,0:17:35.71:0,36,259	0/0:20,0:21:38.54:0,39,276	1/1:5,17:23:44.91:423,45,0	1/1:7,22:28:54.09:526,54,0	1/1:6,28:38:2.70:560,3,0	0/0:10,0:11:18.46:0,18,205	0/1:27,0:27:44.54:45,0,175	0/0:18,1:22:5.29:0,5,253	0/1:21,6:28:93.17:93,0,216	0/0:19,0:21:15:0,15,224	0/0:25,0:26:53.51:0,54,379	0/0:16,0:16:6.52:0,7,208	1/1:4,15:20:33.77:308,34,0	0/0:6,0:19:31.27:0,31,103	0/1:24,2:26:1.76:2,0,310	0/0:3,0:9:17.24:0,17,63
chr10	84547578	.	T	TG	685.33	PASS	AB=1.000;AC=12;AF=0.222;AN=54;BaseQRankSum=1.583;DP=539;FS=4.390;HRun=8;HaplotypeScore=89.5433;InbreedingCoeff=0.6857;MQ=56.04;MQ0=14;MQRankSum=-1.380;QD=6.85;ReadPosRankSum=-1.636;VQSLOD=0.9140;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,16:22:30.03:346,30,0	0/0:6,0:6:15.01:0,15,137	0/0:35,0:11:17.40:0,17,192	0/0:55,0:18:26.97:0,27,235	0/0:26,0:25:48.02:0,48,439	0/0:14,0:12:27:0,27,243	1/1:21,0:20:3.49:29,3,0	1/1:14,0:14:11.15:60,11,0	0/0:16,0:16:42.02:0,42,384	0/0:31,0:29:56.76:0,57,491	0/0:17,0:17:38.65:0,39,333	0/0:22,0:22:53.99:0,54,484	0/0:25,0:24:59.98:0,60,540	0/0:23,0:21:46.81:0,47,415	1/1:4,12:15:33.09:369,33,0	0/1:14,0:14:12.03:12,0,134	0/0:13,0:12:29.91:0,30,266	0/0:6,0:6:12.01:0,12,110	0/1:4,0:4:2.80:19,0,3	./.	0/0:14,0:15:1.98:0,2,13	0/0:27,0:27:59.04:0,59,522	0/0:23,0:23:41.99:0,42,380	0/0:24,0:23:35.60:0,36,324	0/0:17,0:17:17.03:0,17,142	0/0:25,0:25:53.93:0,54,489	1/1:6,0:5:2.50:9,2,0	0/0:12,0:10:8:0,8,200
chr10	84547589	.	GGAGAGAGAGAGAGA	G	291.55	PASS	AB=0.881;AC=7;AF=0.130;AN=54;BaseQRankSum=3.490;DP=516;FS=0.000;HRun=0;HaplotypeScore=175.4361;InbreedingCoeff=0.3941;MQ=51.31;MQ0=24;MQRankSum=-3.522;QD=4.56;ReadPosRankSum=-1.450;VQSLOD=2.3534;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:17:11.91:0,12,144	0/0:9,0:9:12.04:0,12,373	0/0:30,0:7:2.50:0,2,9	0/0:48,0:13:0.47:0,0,1	0/0:25,0:24:24.08:0,24,737	1/1:12,0:10:6.01:80,6,0	0/1:14,0:13:3.37:3,0,19	0/0:14,0:12:12.01:0,12,158	0/0:17,0:17:24.08:0,24,832	0/0:27,0:28:57.19:0,57,1721	0/0:14,0:14:6.02:0,6,248	0/0:16,0:20:27.09:0,27,730	0/0:28,0:28:48.16:0,48,1629	0/0:18,0:18:33.11:0,33,1309	0/0:19,0:17:24.08:0,24,544	0/0:14,0:14:14.77:0,15,459	0/0:14,0:14:17.16:0,17,503	0/0:5,0:4:6.02:0,6,186	0/0:6,0:5:3.48:0,3,57	./.	1/1:13,0:12:2.88:37,3,0	0/0:28,0:28:36.12:0,36,1216	0/0:23,0:22:18.53:0,19,627	0/0:18,0:22:35.96:0,36,795	0/1:8,10:18:4.94:278,0,5	0/0:25,0:25:55.07:0,55,1550	0/1:6,0:5:4.09:4,0,64	0/0:13,0:11:15.05:0,15,416
chr10	84547590	.	GAGAGAGA	G	229.06	PASS	AB=1.000;AC=5;AF=0.093;AN=54;BaseQRankSum=6.033;DP=511;FS=20.740;HRun=0;HaplotypeScore=123.5225;InbreedingCoeff=0.1932;MQ=50.15;MQ0=24;MQRankSum=-5.021;QD=5.59;ReadPosRankSum=-3.058;VQSLOD=-0.2529;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:17:19.60:0,20,192	0/0:9,0:9:20.96:0,21,431	0/0:28,0:7:18.54:0,19,154	0/0:47,0:12:26.99:0,27,273	0/0:25,0:24:54.17:0,54,975	0/0:13,0:10:17.08:0,17,181	0/1:12,0:12:15.34:24,0,15	0/0:14,0:12:10.57:0,11,133	0/0:17,0:17:48.16:0,48,930	0/0:31,0:30:84.23:0,84,1933	0/0:14,0:14:23.94:0,24,463	0/0:22,0:22:43.72:0,44,955	0/0:28,0:27:75.22:0,75,1490	0/0:20,0:18:46.24:0,46,1091	0/0:19,0:17:29.66:0,30,266	0/0:14,0:14:16.12:0,16,445	0/0:15,0:14:30.06:0,30,642	0/0:5,0:4:9.03:0,9,242	0/1:5,0:4:51.28:88,0,51	./.	0/0:10,2:11:5.53:0,6,47	0/0:28,0:28:66.19:0,66,1435	0/0:22,0:21:45.13:0,45,766	0/0:23,0:21:1.53:0,2,445	0/1:18,0:18:99:105,0,119	0/0:26,0:25:70.11:0,70,1649	1/1:2,4:5:5.11:125,5,0	0/0:13,0:11:33.10:0,33,604
chr10	84547626	.	G	GGA	493.06	PASS	AB=0.944;AC=4;AF=0.071;AN=56;BaseQRankSum=3.670;DP=574;FS=0.000;HRun=0;HaplotypeScore=106.8779;InbreedingCoeff=0.2085;MQ=49.19;MQ0=34;MQRankSum=-4.144;QD=9.67;ReadPosRankSum=1.126;VQSLOD=3.4373;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:20:32.25:0,32,454	0/0:10,0:10:21.05:0,21,302	0/0:28,0:5:15.05:0,15,232	0/0:53,0:8:7.60:0,8,126	0/0:20,0:20:39.09:0,39,525	0/0:16,0:15:39.13:0,39,544	0/0:15,0:15:9.08:0,9,333	0/0:30,0:22:48.82:0,49,643	0/0:16,0:16:30.09:0,30,424	0/0:31,0:30:83.92:0,84,1063	0/0:21,0:19:45.14:0,45,669	0/0:19,0:19:42.01:0,42,554	0/0:25,0:23:60.14:0,60,814	0/0:19,0:18:42.11:0,42,583	0/0:17,0:16:31.92:0,32,404	0/0:14,0:13:22.64:0,23,262	0/0:20,0:18:25.62:0,26,339	0/0:8,0:7:18.02:0,18,253	0/0:11,0:9:26.11:0,26,329	0/0:8,0:6:11.97:0,12,154	0/0:26,0:22:35.78:0,36,464	0/0:23,0:23:54.16:0,54,795	0/0:27,0:26:53.84:0,54,764	0/0:23,0:23:6.71:0,7,350	0/0:19,0:19:7.33:0,7,269	0/1:21,2:23:99:414,0,274	0/1:12,0:11:17.25:17,0,214	1/1:3,8:13:1.30:162,1,0
chr10	84547657	.	GGA	G	539.09	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.800;DP=653;FS=5.710;HRun=0;HaplotypeScore=96.3502;InbreedingCoeff=0.8119;MQ=50.43;MQ0=28;MQRankSum=0.317;QD=22.46;ReadPosRankSum=-0.077;VQSLOD=4.0394;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,16:23:51.74:634,52,0	0/0:9,0:9:21.04:0,21,322	0/0:48,0:8:17.79:0,18,220	0/0:70,0:10:11.66:0,12,150	0/0:17,0:17:36.12:0,36,602	0/0:16,1:17:12.91:0,13,660	0/0:22,0:22:54.18:0,54,877	0/0:29,0:25:63.11:0,63,935	0/0:20,0:20:51.17:0,51,850	0/0:27,0:27:65.42:0,65,1031	0/0:21,0:20:54.18:0,54,856	0/0:26,0:26:57.15:0,57,873	0/0:22,0:22:57.14:0,57,894	0/0:27,0:27:47.79:0,48,1052	0/0:16,0:16:45.11:0,45,666	0/0:18,0:17:48.15:0,48,766	0/0:18,0:17:39.13:0,39,608	0/0:9,0:9:27.09:0,27,451	0/0:17,1:15:4.63:0,5,603	0/0:10,0:10:19.14:0,19,263	0/0:34,0:31:75.26:0,75,1235	0/0:18,0:18:48.16:0,48,801	0/0:25,0:25:53.96:0,54,805	0/0:25,0:25:57.17:0,57,914	0/0:24,0:24:45.15:0,45,724	0/0:31,0:30:74.73:0,75,1122	0/0:11,0:11:30.06:0,30,471	0/0:17,0:15:15.03:0,15,205
chr10	84547725	.	G	GGA	1393.20	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=2.780;DP=635;FS=8.561;HRun=0;HaplotypeScore=87.7458;InbreedingCoeff=0.7478;MQ=56.75;MQ0=26;MQRankSum=-0.706;QD=20.49;ReadPosRankSum=1.405;VQSLOD=3.7220;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,22:35:66.59:1190,67,0	0/1:6,0:6:3.87:4,0,125	0/0:38,0:7:0.47:0,0,1	0/0:72,0:19:4.88:0,5,116	0/0:21,0:22:41.95:0,42,493	0/0:16,0:15:33.11:0,33,419	0/0:16,0:14:33.11:0,33,416	0/0:31,0:25:51.12:0,51,617	0/0:27,0:26:39.49:0,39,626	0/0:25,0:25:66.21:0,66,840	0/0:9,0:9:18.06:0,18,227	0/0:28,0:28:34.90:0,35,788	0/0:19,0:18:39.06:0,39,463	0/0:24,0:23:48.09:0,48,575	0/0:23,0:23:63.17:0,63,762	0/0:29,0:29:71.91:0,72,849	0/0:24,0:23:51.03:0,51,602	0/0:16,0:16:45.14:0,45,571	0/0:16,0:13:33.10:0,33,417	0/0:12,0:12:33.07:0,33,389	0/0:29,0:29:64.74:0,65,780	0/0:10,0:10:27.09:0,27,342	0/0:17,0:17:27.09:0,27,344	0/0:28,0:28:59.80:0,60,700	0/0:21,0:21:42.11:0,42,506	1/1:23,0:21:35.49:309,35,0	0/0:14,0:14:39.11:0,39,481	1/1:3,0:3:2.99:24,3,0
chr10	84547730	.	G	GAGAGGGAA	1689.01	PASS	AB=0.993;AC=6;AF=0.107;AN=56;BaseQRankSum=0.151;DP=646;FS=33.671;HRun=0;HaplotypeScore=152.5669;InbreedingCoeff=0.6666;MQ=55.39;MQ0=28;MQRankSum=-2.544;QD=12.06;ReadPosRankSum=-1.740;VQSLOD=1.2295;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:85.53:0,86,639	0/0:5,0:5:14.41:0,14,276	0/1:41,0:7:0:0,0,0	0/1:71,0:15:22.96:23,0,261	0/0:19,0:19:48.13:0,48,1138	0/0:17,0:16:42.07:0,42,978	0/0:16,0:14:36.11:0,36,883	0/0:34,0:28:69.18:0,69,1471	0/0:25,0:24:53.44:0,53,1496	0/0:27,0:27:81.24:0,81,1967	0/0:11,0:11:21.02:0,21,473	0/0:28,0:28:60.20:0,60,1731	0/0:21,0:20:47.72:0,48,1092	0/0:22,0:21:57.12:0,57,1291	0/0:23,0:23:69.21:0,69,1705	0/0:31,0:31:87.16:0,87,1915	0/0:23,0:22:57.04:0,57,1274	0/0:17,0:16:48.13:0,48,1251	0/0:19,0:16:48.11:0,48,991	0/0:12,0:12:36.11:0,36,859	0/0:32,0:32:78.21:0,78,1800	0/0:11,0:11:30.07:0,30,759	0/0:16,0:16:36.08:0,36,828	0/0:28,0:28:62.42:0,62,1527	0/0:20,0:20:45.14:0,45,1093	1/1:6,13:21:54.16:1652,54,0	0/0:15,0:15:39.13:0,39,1008	1/1:0,2:3:3.01:132,3,0
chr10	84548888	.	TGTG	T	2421.44	PASS	AB=0.513;AC=3;AF=0.054;AN=56;BaseQRankSum=8.943;DP=677;FS=3.371;HRun=0;HaplotypeScore=97.9464;InbreedingCoeff=0.6624;MQ=74.96;MQ0=0;MQRankSum=-4.873;QD=50.45;ReadPosRankSum=1.412;VQSLOD=6.0639;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,2585	0/0:6,0:6:18.06:0,18,444	0/0:24,0:22:48.31:0,48,1270	0/0:17,0:17:38.10:0,38,971	0/0:23,0:23:69.22:0,69,1627	0/0:23,0:23:66.23:0,66,1597	0/0:26,0:26:78.27:0,78,1889	0/0:28,0:28:84.28:0,84,1958	0/0:23,0:23:69.24:0,69,1672	0/0:30,0:30:87.30:0,87,2142	0/0:16,0:16:48.14:0,48,1065	0/0:32,0:32:96.32:0,96,2317	0/0:26,0:26:78.27:0,78,1807	0/0:14,0:14:42.14:0,42,1006	0/0:25,0:25:75.26:0,75,1849	0/0:22,0:22:63.19:0,63,1501	0/0:35,0:35:99:0,105,2523	0/0:21,0:21:63.19:0,63,1488	0/0:18,0:18:54.19:0,54,1303	0/0:21,0:21:63.22:0,63,1513	0/0:46,0:46:99:0,135,3214	0/0:22,0:22:64.10:0,64,1550	0/0:24,0:24:72.21:0,72,1716	0/0:36,0:36:99:0,108,2657	0/0:17,0:17:48.16:0,48,1126	0/1:1,19:20:13.78:969,0,14	0/0:18,0:18:54.19:0,54,1304	1/1:1,27:28:84.29:1559,84,0
chr10	84548984	.	CCTT	C	3153.17	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=1.803;DP=712;FS=0.000;HRun=0;HaplotypeScore=149.5300;InbreedingCoeff=0.9945;MQ=64.39;MQ0=2;MQRankSum=-3.690;QD=40.43;ReadPosRankSum=2.003;VQSLOD=4.6718;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,108,2205	0/0:12,0:12:36.12:0,36,569	0/0:37,0:26:14.27:0,14,706	0/0:39,0:29:51.19:0,51,951	0/0:31,0:31:93.32:0,93,1993	1/1:0,15:15:33.11:549,33,0	0/0:17,0:18:45.15:0,45,716	0/0:31,0:31:81.13:0,81,1239	0/0:26,0:26:78.26:0,78,1590	0/0:19,0:19:48.16:0,48,718	0/0:15,0:15:39.13:0,39,591	0/0:34,0:34:99:0,102,2193	0/0:28,0:28:78.22:0,78,1605	0/0:27,0:27:81.28:0,81,1780	0/0:28,0:28:81.27:0,81,1734	0/0:30,0:30:84.27:0,84,1307	0/0:27,0:27:54.80:0,55,869	0/0:29,0:29:84.24:0,84,1677	0/0:22,0:22:56.82:0,57,864	0/0:21,0:21:60.19:0,60,962	0/0:19,0:19:36.11:0,36,505	0/0:17,0:17:45.15:0,45,1018	0/0:26,0:26:72.25:0,72,1562	0/0:30,1:31:34.42:0,34,1643	1/1:0,20:20:45.15:748,45,0	1/1:0,27:27:81.28:1325,81,0	0/0:25,0:25:62.80:0,63,917	1/1:2,14:16:42.14:692,42,0
chr10	84548985	.	C	CTTCT	11082.99	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=4.330;DP=736;FS=3.464;HRun=0;HaplotypeScore=143.8662;InbreedingCoeff=0.9903;MQ=63.82;MQ0=3;MQRankSum=-2.506;QD=42.79;ReadPosRankSum=-0.351;VQSLOD=4.7499;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:86.94:0,87,1368	1/1:1,11:13:33.11:811,33,0	0/0:39,0:24:24.73:0,25,325	0/0:40,0:30:8.62:0,9,416	0/0:31,0:31:81.14:0,81,1214	0/0:15,0:15:32.45:0,32,274	1/1:3,13:17:39.13:956,39,0	1/1:14,19:37:66.13:1097,66,0	0/0:26,0:26:63.18:0,63,971	1/1:5,15:21:45.13:1007,45,0	1/1:1,15:16:36.12:831,36,0	0/0:34,0:34:90.29:0,90,1442	0/0:28,0:28:66.19:0,66,1028	0/0:27,0:27:69.22:0,69,1102	0/0:30,0:30:69.21:0,69,1102	1/1:4,27:31:72.25:1769,72,0	1/1:8,20:29:45.15:1106,45,0	0/0:29,0:29:63.15:0,63,965	1/1:11,15:27:51.06:799,51,0	1/1:4,19:23:51:1017,51,0	1/1:6,13:19:24.08:590,24,0	0/0:17,0:17:45.14:0,45,723	0/0:27,0:27:63.18:0,63,978	0/0:31,0:31:72.21:0,72,1125	0/0:20,0:20:32.45:0,32,378	0/0:27,0:27:65.34:0,65,620	1/1:8,18:26:45.15:1100,45,0	0/0:15,0:16:39.04:0,39,361
chr10	84549168	.	A	ATGT	10676.95	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=0.977;DP=732;FS=10.263;HRun=0;HaplotypeScore=114.2628;InbreedingCoeff=0.9855;MQ=62.78;MQ0=0;MQRankSum=0.895;QD=31.50;ReadPosRankSum=-0.813;VQSLOD=4.4007;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,27:36:48.16:980,48,0	1/1:2,7:9:18.06:358,18,0	0/0:15,0:10:8.96:0,9,91	0/0:16,0:14:11.23:0,11,212	0/0:22,0:22:54.15:0,54,743	0/0:20,0:20:48.08:0,48,601	1/1:7,25:31:45.15:883,45,0	1/1:11,23:32:57.18:1076,57,0	0/0:25,0:25:69.22:0,69,982	1/1:11,27:37:81.12:1415,81,0	1/1:2,15:17:39.05:709,39,0	0/0:39,0:39:99:0,99,1400	0/0:22,0:22:60.18:0,60,849	0/0:25,0:25:69.18:0,69,937	0/0:33,0:33:69.23:0,69,1001	1/1:5,30:35:45.15:924,45,0	1/1:6,30:38:48.16:986,48,0	0/0:23,0:23:57.15:0,57,788	1/1:8,14:22:42.09:696,42,0	1/1:3,18:21:42.14:862,42,0	1/1:6,18:24:30.10:617,30,0	0/0:23,0:23:63.18:0,63,877	0/0:30,0:30:72.23:0,72,1026	0/0:26,0:26:60.10:0,60,802	0/0:25,0:25:66.18:0,66,920	0/0:30,0:30:74.83:0,75,1030	1/1:4,28:33:57.67:1171,58,0	0/0:19,0:19:48.14:0,48,678
chr10	84549861	.	CTCTCTTTTTTTTTTTTTTTT	C	21822.92	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=11.320;DP=523;FS=12.120;HRun=0;HaplotypeScore=247.6038;InbreedingCoeff=0.9015;MQ=66.66;MQ0=11;MQRankSum=-8.002;QD=84.26;ReadPosRankSum=6.881;VQSLOD=3.0738;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:21.07:1168,21,0	1/1:0,9:9:15.52:836,16,0	0/0:53,0:20:51.13:0,51,1331	0/0:37,0:18:44.19:0,44,1286	0/0:13,0:14:42.14:0,42,1992	0/0:17,0:17:45.14:0,45,1554	1/1:0,19:19:33.11:1708,33,0	1/1:1,21:22:63.17:1758,63,0	0/0:17,0:17:8.65:0,9,2453	1/1:1,29:30:72.23:3275,72,0	1/1:0,10:10:21.07:906,21,0	0/0:22,0:22:66.20:0,66,4147	0/0:12,0:12:33.09:0,33,1694	0/0:17,0:17:45.14:0,45,1920	0/1:18,0:18:99:181,0,1974	1/1:1,15:17:39.13:2128,39,0	1/1:0,11:11:15.05:833,15,0	0/0:13,0:13:39.09:0,39,2119	1/1:0,11:11:33.10:1320,33,0	1/1:0,21:21:42.14:1956,42,0	1/1:0,22:22:12.04:540,12,0	0/0:18,0:18:54.19:0,54,3709	0/0:15,0:15:42.14:0,42,2965	0/0:10,0:10:19.31:0,19,780	0/0:19,0:19:57.13:0,57,1785	1/1:0,22:22:63.19:2547,63,0	1/1:1,19:20:37.12:2166,37,0	1/1:0,3:3:9.03:501,9,0
chr10	84550856	.	AG	A	1177.17	PASS	AB=0.881;AC=24;AF=0.429;AN=56;BaseQRankSum=11.797;DP=455;FS=8.157;HRun=1;HaplotypeScore=85.6352;InbreedingCoeff=0.3264;MQ=53.24;MQ0=34;MQRankSum=-9.962;QD=5.58;ReadPosRankSum=-2.040;VQSLOD=-0.6522;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,12:20:5.81:213,6,0	1/1:4,1:5:7.18:48,7,0	0/1:22,1:7:4.48:4,0,75	0/1:39,0:13:24.50:25,0,208	0/0:36,0:33:90.28:0,90,1271	0/0:16,0:15:42.14:0,42,608	0/1:6,6:11:60.66:67,0,61	0/1:16,6:18:15.81:126,0,16	0/0:18,0:18:42.07:0,42,564	1/1:3,1:4:11:76,11,0	0/1:14,0:11:31.55:47,0,32	0/0:15,0:15:42.11:0,42,574	0/0:10,0:10:27.09:0,27,394	0/0:13,0:13:36.11:0,36,504	0/0:17,0:17:45.08:0,45,580	0/1:8,0:7:24.98:85,0,25	1/1:13,1:10:20.53:137,21,0	0/0:35,0:33:90.26:0,90,1267	1/1:8,5:13:1.94:163,2,0	1/1:2,2:4:8.96:80,9,0	1/1:3,2:5:2.88:15,3,0	0/0:21,0:18:42.42:0,42,639	0/0:18,0:16:38.81:0,39,567	0/0:22,0:21:57.01:0,57,778	0/0:23,0:21:60.05:0,60,803	0/1:10,2:11:23.92:94,0,24	1/1:5,4:9:11.78:90,12,0	0/1:5,2:6:26.24:96,0,26
chr10	84550867	.	AACAAAACAAAAC	A	3041.37	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=13.086;DP=471;FS=19.793;HRun=0;HaplotypeScore=176.7949;InbreedingCoeff=0.8455;MQ=59.14;MQ0=24;MQRankSum=-9.766;QD=17.89;ReadPosRankSum=-5.816;VQSLOD=-0.5876;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:41.61:686,42,0	1/1:5,0:5:13.85:231,14,0	0/0:30,0:13:25.05:0,25,534	0/0:44,0:18:5.51:0,6,843	0/0:32,0:31:90.07:0,90,3931	0/0:16,0:15:45.15:0,45,2328	1/1:13,0:12:9.80:311,10,0	1/1:26,0:23:29.41:345,29,0	0/0:14,0:14:12.74:0,13,1545	1/1:2,5:7:20.86:304,21,0	1/1:16,0:16:14.83:99,15,0	0/0:14,0:14:42.14:0,42,2112	0/0:9,0:9:27.09:0,27,1436	0/0:12,0:12:36.10:0,36,1738	0/0:18,0:18:54.17:0,54,2326	0/1:6,0:6:39.66:40,0,148	1/1:13,0:12:15.05:251,15,0	0/0:34,0:32:90.26:0,90,4444	1/1:16,0:16:10.30:285,10,0	1/1:5,0:4:5.42:17,5,0	1/1:9,0:9:3.32:32,3,0	0/0:20,0:19:57.19:0,57,2427	0/0:16,0:15:42.11:0,42,1903	0/0:20,0:20:54.08:0,54,2857	0/0:22,0:22:66.14:0,66,2753	1/1:14,0:14:28.62:255,29,0	1/1:9,0:10:23.50:305,23,0	1/1:9,0:8:13.09:100,13,0
chr10	84550869	.	CAAAACAAAACA	C	3173.02	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=12.642;DP=468;FS=18.344;HRun=0;HaplotypeScore=167.7616;InbreedingCoeff=0.6201;MQ=59.47;MQ0=21;MQRankSum=-8.663;QD=18.78;ReadPosRankSum=-5.161;VQSLOD=-0.1041;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,6:21:47.96:830,48,0	1/1:4,0:4:3.45:176,3,0	0/0:28,0:13:25.80:0,26,693	0/0:44,0:18:30.50:0,31,902	0/0:32,0:32:81.26:0,81,3873	0/0:16,0:15:45.15:0,45,2210	1/1:12,1:12:29.20:389,29,0	1/1:32,0:29:54.51:572,55,0	0/0:14,0:14:28.96:0,29,1536	1/1:7,0:7:9.54:172,10,0	0/1:16,0:16:6.09:50,0,6	0/0:14,0:14:42.08:0,42,1976	0/0:9,0:9:27.08:0,27,1348	0/0:12,0:12:33.11:0,33,1701	0/0:18,0:18:51.16:0,51,2314	0/1:5,0:5:54.50:54,0,141	0/1:7,0:7:22.61:171,0,23	0/0:33,0:31:84.25:0,84,4168	1/1:14,2:16:21.73:368,22,0	1/1:5,0:4:3:27,3,0	1/1:8,1:9:5.88:114,6,0	0/0:20,0:19:57.11:0,57,2470	0/0:14,0:14:39.13:0,39,1760	0/0:21,0:20:51.17:0,51,2719	0/0:23,0:23:66.17:0,66,2669	0/1:14,0:14:16.50:82,0,16	1/1:8,2:10:23.71:335,24,0	1/1:9,0:8:1.84:32,2,0
chr10	84550872	.	AAC	A	1870.32	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=13.190;DP=463;FS=18.895;HRun=0;HaplotypeScore=103.4892;InbreedingCoeff=0.7533;MQ=62.07;MQ0=19;MQRankSum=-10.216;QD=11.00;ReadPosRankSum=-6.051;VQSLOD=0.8571;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:19,2:20:44.25:364,44,0	0/1:4,0:4:23.85:36,0,24	0/0:29,0:15:32.23:0,32,347	0/0:43,0:19:27.82:0,28,348	0/0:29,0:29:81.26:0,81,1417	0/0:16,0:15:45.15:0,45,820	1/1:13,0:12:28.78:245,29,0	1/1:31,1:29:52.35:397,52,0	0/0:14,0:14:28.96:0,29,645	1/1:7,0:7:9.37:42,9,0	1/1:16,0:16:8.89:59,9,0	0/0:14,0:14:42.13:0,42,720	0/0:9,0:9:27.08:0,27,464	0/0:11,0:11:33.11:0,33,603	0/0:18,0:18:51.17:0,51,913	0/1:5,0:5:15.30:15,0,51	0/1:7,0:7:10.85:35,0,11	0/0:32,0:30:84.25:0,84,1474	1/1:14,1:15:30.44:292,30,0	1/1:5,0:4:5.92:39,6,0	1/1:11,0:11:15.54:111,16,0	0/0:20,0:19:57.11:0,57,993	0/0:13,0:13:39.12:0,39,674	0/0:22,0:21:54.18:0,54,971	0/0:23,0:23:66.19:0,66,1114	1/1:14,1:15:24.01:167,24,0	1/1:10,0:10:23.65:210,24,0	1/1:9,0:8:13.21:74,13,0
chr10	84550879	.	CA	C	1503.21	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=10.776;DP=446;FS=5.363;HRun=9;HaplotypeScore=91.9588;InbreedingCoeff=0.8432;MQ=67.13;MQ0=11;MQRankSum=-7.289;QD=12.53;ReadPosRankSum=-4.318;VQSLOD=2.5188;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:8,9:16:38.82:313,39,0	0/0:4,0:4:2.69:0,3,37	0/0:28,0:16:27.42:0,27,340	0/0:37,1:21:34.79:0,35,332	0/0:25,0:26:78.02:0,78,863	0/0:17,0:16:39.12:0,39,450	1/1:5,7:11:26.65:218,27,0	1/1:26,4:27:56.39:499,56,0	0/0:14,0:14:33.10:0,33,381	1/1:7,0:7:3.90:12,4,0	0/1:15,0:15:0.28:0,0,16	0/0:15,0:15:39.10:0,39,441	0/0:8,0:8:24.07:0,24,277	0/0:11,0:11:30.09:0,30,346	0/0:18,0:18:48.12:0,48,541	0/0:6,0:6:10.08:0,10,66	0/0:12,0:12:14.33:0,14,116	0/0:29,0:28:72.20:0,72,821	1/1:5,9:14:29.62:247,30,0	1/1:0,6:5:11.93:97,12,0	1/1:1,10:11:17.50:159,18,0	0/0:18,0:18:51.07:0,51,571	0/0:13,0:13:27.04:0,27,295	0/0:23,0:22:57.17:0,57,658	0/0:21,0:21:60.18:0,60,692	0/0:4,0:15:11.61:0,12,98	1/1:6,2:8:18.85:152,19,0	0/0:4,0:7:0.62:0,1,10
chr10	84550888	.	AC	A	1517.83	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=10.651;DP=450;FS=2.936;HRun=1;HaplotypeScore=92.8039;InbreedingCoeff=0.8446;MQ=74.08;MQ0=2;MQRankSum=-7.742;QD=11.77;ReadPosRankSum=-2.210;VQSLOD=1.3722;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:38.87:314,39,0	0/0:5,0:5:0.63:0,1,20	0/0:26,0:17:46.98:0,47,509	0/0:31,1:21:50.40:0,50,484	0/0:26,0:26:75.18:0,75,1017	0/0:15,0:14:42.13:0,42,568	1/1:11,0:11:26.68:218,27,0	1/1:10,17:27:56.98:509,57,0	0/0:16,0:16:44.99:0,45,544	1/1:10,0:10:3.98:12,4,0	0/1:15,0:15:0.39:0,0,14	0/0:17,0:17:51.03:0,51,631	0/0:10,0:10:30.07:0,30,380	0/0:10,0:10:30.10:0,30,417	0/0:18,0:18:51.12:0,51,687	0/0:7,0:7:5.80:0,6,52	0/0:13,0:13:10.35:0,10,76	0/0:30,0:29:81.19:0,81,1055	1/1:17,0:17:29.74:247,30,0	1/1:8,0:7:11.93:98,12,0	1/1:16,0:16:18.48:161,18,0	0/0:20,0:21:59.97:0,60,763	0/0:11,0:11:30.05:0,30,379	0/0:22,0:21:60.18:0,60,817	0/0:20,0:20:60.20:0,60,833	0/0:14,0:14:25.86:0,26,232	1/1:9,0:9:18.85:152,19,0	0/0:7,0:7:5.78:0,6,33
chr10	84551068	.	CGGAG	C	5534.10	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=8.866;DP=426;FS=4.635;HRun=0;HaplotypeScore=132.1596;InbreedingCoeff=0.9655;MQ=69.19;MQ0=0;MQRankSum=-10.086;QD=33.14;ReadPosRankSum=0.445;VQSLOD=4.8924;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:27.04:481,27,0	1/1:2,4:6:9.03:172,9,0	0/0:16,0:16:43.28:0,43,819	0/0:11,0:12:14.37:0,14,370	0/0:14,0:14:27.09:0,27,701	0/0:16,0:16:39.12:0,39,922	1/1:1,21:22:36.12:672,36,0	1/1:2,12:14:27.05:465,27,0	0/0:21,0:21:60.15:0,60,1388	1/1:1,8:9:21.07:404,21,0	1/1:0,11:11:5.98:78,6,0	0/0:25,0:25:69.14:0,69,1637	0/0:12,0:12:29.98:0,30,677	0/0:19,0:19:54.18:0,54,1325	0/0:23,0:23:66.09:0,66,1498	1/1:1,12:13:36.12:693,36,0	1/1:2,12:14:36.04:617,36,0	0/0:30,0:30:87.24:0,87,2071	1/1:8,7:15:26.67:423,27,0	1/1:2,8:10:20.98:308,21,0	1/1:6,3:9:11.98:143,12,0	0/0:13,0:13:28.33:0,28,588	0/0:17,0:16:27.02:0,27,589	0/0:22,0:22:60.11:0,60,1297	0/0:19,0:19:53.93:0,54,1247	1/1:2,10:12:21.07:403,21,0	1/1:0,9:9:15.05:269,15,0	1/1:1,7:8:21.07:405,21,0
chr10	84551562	.	CTCTGTCTG	C	5237.43	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=11.446;DP=711;FS=1.425;HRun=0;HaplotypeScore=228.6281;InbreedingCoeff=0.7031;MQ=61.10;MQ0=5;MQRankSum=-5.678;QD=15.05;ReadPosRankSum=-1.566;VQSLOD=3.7054;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:40:7.90:118,8,0	1/1:5,0:5:3:25,3,0	0/0:40,0:28:33.78:0,34,545	0/0:34,0:22:9.12:0,9,337	0/0:18,0:18:33.10:0,33,1130	0/0:23,0:23:35.61:0,36,940	1/1:24,0:24:2.77:75,3,0	1/1:46,0:45:99:1505,99,0	0/0:23,0:23:36.10:0,36,1468	1/1:23,1:24:39.08:788,39,0	1/1:13,0:13:5.52:89,6,0	0/0:43,0:43:75.24:0,75,2592	0/0:22,0:22:45.15:0,45,1697	0/0:22,0:22:48.16:0,48,1651	1/1:28,0:28:1.92:15,2,0	0/1:21,0:21:98.96:367,0,99	1/1:32,1:32:15.04:236,15,0	0/0:22,0:22:60.21:0,60,2077	1/1:31,0:29:45.02:665,45,0	1/1:21,1:22:16.99:319,17,0	1/1:26,0:26:8.79:149,9,0	0/0:25,0:26:51.14:0,51,1555	0/0:24,0:24:36.10:0,36,1284	0/0:43,0:43:96.33:0,96,3420	0/0:15,0:15:33.08:0,33,860	0/1:23,0:23:11.55:258,0,12	1/1:11,1:12:30.06:627,30,0	0/0:8,0:8:0.44:0,0,26
chr10	84551576	.	CTGTCTG	C	1123.34	PASS	AB=0.996;AC=15;AF=0.268;AN=56;BaseQRankSum=12.157;DP=667;FS=1.519;HRun=0;HaplotypeScore=203.5081;InbreedingCoeff=0.0168;MQ=53.93;MQ0=7;MQRankSum=-3.755;QD=3.57;ReadPosRankSum=2.680;VQSLOD=2.1267;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:41:29.79:30,0,48	0/1:6,0:6:0.69:1,0,12	0/0:28,0:16:42.57:0,43,880	0/0:20,0:12:22.01:0,22,515	0/0:18,0:18:42.14:0,42,1242	0/0:23,0:23:41.49:0,41,1100	0/1:19,0:19:41.37:41,0,55	0/1:43,0:41:99:182,0,175	0/0:24,0:24:32.07:0,32,1737	1/1:16,0:16:13.03:339,13,0	0/0:15,0:15:1.26:0,1,62	0/0:42,0:42:99:0,108,3083	0/0:23,0:23:60.18:0,60,1794	0/0:23,0:23:60.19:0,60,1803	1/1:0,33:35:1.55:16,2,0	0/1:23,0:24:97.04:97,0,214	0/1:37,0:34:95.45:136,0,95	0/0:24,0:23:66.23:0,66,2069	0/1:22,0:21:99:114,0,209	0/1:18,0:18:1.18:82,0,1	0/1:24,0:24:13.48:13,0,33	0/0:24,0:24:65.62:0,66,1793	0/0:24,0:24:48.16:0,48,1418	0/0:41,0:41:99:0,108,3461	0/0:16,0:16:33.11:0,33,983	0/1:18,0:18:18.74:19,0,269	0/1:12,0:12:8.70:208,0,9	0/0:7,0:7:18.05:0,18,223
chr10	84551578	.	GTCTGTCTGTC	G	6062.78	PASS	AB=0.940;AC=23;AF=0.411;AN=56;BaseQRankSum=10.531;DP=658;FS=0.000;HRun=0;HaplotypeScore=220.0481;InbreedingCoeff=0.6162;MQ=53.97;MQ0=7;MQRankSum=-5.228;QD=20.98;ReadPosRankSum=-2.629;VQSLOD=3.0067;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:40:4.43:124,4,0	1/1:6,0:6:5.94:43,6,0	0/0:27,0:15:33.37:0,33,572	0/0:19,0:11:15.11:0,15,421	0/0:18,0:18:42.13:0,42,1533	0/0:23,0:23:35.45:0,35,1169	1/1:7,12:20:1.97:110,2,0	1/1:4,36:38:99:1883,109,0	0/0:24,0:24:59.42:0,59,2143	1/1:11,5:16:37.23:911,37,0	1/1:14,3:17:6.37:90,6,0	0/0:39,0:39:62.72:0,63,3719	0/0:24,0:24:59.38:0,59,2339	0/0:23,0:23:60.21:0,60,2235	0/0:36,0:36:5.20:0,5,40	0/1:18,5:23:99:455,0,125	0/1:36,0:33:50.92:177,0,51	0/0:25,0:24:69.21:0,69,2682	1/1:6,16:21:48.86:739,49,0	1/1:15,3:18:2.24:302,2,0	1/1:21,2:23:8.81:149,9,0	0/0:25,0:25:63.19:0,63,2194	0/0:24,0:24:42.12:0,42,1748	0/0:40,0:40:99:0,105,4477	0/0:16,0:16:33.08:0,33,1023	0/1:16,0:16:8.51:342,0,9	1/1:6,6:12:21.88:737,22,0	0/0:6,0:6:0.43:0,0,20
chr10	84551580	.	CTGTCTG	C	4853.01	PASS	AB=0.843;AC=24;AF=0.429;AN=56;BaseQRankSum=12.956;DP=649;FS=0.000;HRun=0;HaplotypeScore=184.3862;InbreedingCoeff=0.6375;MQ=53.04;MQ0=7;MQRankSum=-4.781;QD=15.21;ReadPosRankSum=-2.922;VQSLOD=3.4303;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:39:7.01:107,7,0	1/1:6,0:6:6:53,6,0	0/0:23,0:12:33.37:0,33,510	0/0:19,0:11:14.70:0,15,330	0/0:18,0:18:42.13:0,42,1135	0/0:22,0:22:10.83:0,11,750	1/1:19,0:19:8.90:90,9,0	1/1:39,0:37:81.94:1233,82,0	0/0:25,0:25:35.18:0,35,1583	1/1:7,9:16:42.93:748,43,0	1/1:14,4:18:11.03:134,11,0	0/0:39,0:39:90.44:0,90,2788	0/0:25,0:25:44.02:0,44,1739	0/0:23,0:23:60.20:0,60,1681	0/1:34,0:36:5.94:11,0,6	0/1:19,4:23:68.73:490,0,69	0/1:9,27:33:83.28:288,0,83	0/0:25,0:24:69.23:0,69,1944	1/1:18,0:18:32.55:591,33,0	1/1:18,0:19:1.77:280,2,0	1/1:21,1:23:8.27:149,8,0	0/0:24,0:24:62.68:0,63,1600	0/0:22,0:22:42.12:0,42,1259	0/0:42,0:42:99:0,108,3246	0/0:16,0:16:33.08:0,33,755	0/1:14,0:14:1.04:179,0,1	1/1:12,0:12:32.02:500,32,0	0/0:6,0:6:0.41:0,0,17
chr10	84551582	.	GTCTGTCTCTC	G	3956.69	PASS	AB=0.997;AC=18;AF=0.321;AN=56;BaseQRankSum=10.889;DP=645;FS=0.880;HRun=0;HaplotypeScore=222.1118;InbreedingCoeff=0.2507;MQ=53.13;MQ0=7;MQRankSum=-3.851;QD=14.18;ReadPosRankSum=-0.719;VQSLOD=2.5865;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:40:49.97:67,0,50	0/0:6,0:6:0.42:0,0,1	0/0:22,0:11:14.19:0,14,331	0/0:19,0:11:15.86:0,16,292	0/0:18,0:18:39.13:0,39,1552	0/0:25,0:25:38.80:0,39,1142	0/1:19,0:19:48.26:88,0,48	1/1:39,0:37:70.64:1056,71,0	0/0:24,0:24:63.16:0,63,2149	0/1:16,0:16:11.89:622,0,12	0/1:17,0:17:34.63:35,0,37	0/0:38,0:38:87.42:0,87,3884	0/0:25,0:25:67.13:0,67,2503	0/0:22,0:22:60.18:0,60,2332	0/0:36,0:36:6.93:0,7,82	0/1:21,0:21:99:236,0,214	0/1:35,0:33:72.60:73,0,127	0/0:26,0:25:72.20:0,72,2807	1/1:19,0:18:4.59:354,5,0	1/1:19,0:19:1.79:153,2,0	1/1:22,0:22:8.77:75,9,0	0/0:25,0:25:63.18:0,63,2228	0/0:22,0:22:42.12:0,42,1814	0/0:42,0:42:99:0,111,4586	0/0:16,0:16:30.05:0,30,934	1/1:10,4:14:37.77:607,38,0	0/1:12,0:12:21.08:513,0,21	0/1:5,0:5:27.97:80,0,28
chr10	84551584	.	CTG	C	1895.15	PASS	AB=0.968;AC=27;AF=0.482;AN=56;BaseQRankSum=14.062;DP=650;FS=0.831;HRun=0;HaplotypeScore=159.9903;InbreedingCoeff=0.5236;MQ=53.21;MQ0=7;MQRankSum=-5.030;QD=5.56;ReadPosRankSum=-2.534;VQSLOD=3.0625;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:37,4:41:4.88:34,5,0	1/1:4,0:4:3:28,3,0	0/0:16,0:7:13.72:0,14,140	0/0:18,0:10:14.84:0,15,136	0/0:20,0:20:29.59:0,30,535	0/1:26,0:26:10.53:11,0,327	1/1:19,0:19:7.41:31,7,0	1/1:39,0:37:51.27:428,51,0	0/0:25,0:25:51.83:0,52,898	1/1:19,0:19:42.87:275,43,0	1/1:17,0:17:11.80:92,12,0	0/0:38,0:38:90.39:0,90,1505	0/0:26,1:27:46.95:0,47,973	0/0:22,0:22:48.07:0,48,810	0/0:36,0:36:1.28:0,1,9	0/1:17,4:21:22.69:202,0,23	0/1:36,0:33:61.28:61,0,84	0/1:27,0:26:9.63:10,0,852	1/1:21,0:20:3.18:175,3,0	1/1:18,0:18:8.44:133,8,0	1/1:22,0:22:8.94:75,9,0	0/0:25,0:25:49.96:0,50,821	0/0:23,0:23:44.55:0,45,735	0/0:43,0:43:99:0,114,1736	0/0:16,0:16:30.01:0,30,340	1/1:14,0:14:36.61:295,37,0	1/1:12,0:12:30.31:165,30,0	0/1:5,0:5:22.13:80,0,22
chr10	84551586	.	GTC	G	781.40	PASS	AB=0.985;AC=22;AF=0.393;AN=56;BaseQRankSum=10.698;DP=641;FS=19.930;HRun=0;HaplotypeScore=161.5042;InbreedingCoeff=0.3091;MQ=51.56;MQ0=7;MQRankSum=-8.691;QD=2.44;ReadPosRankSum=0.691;VQSLOD=1.3959;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:42:2.97:12,0,3	1/1:4,0:4:2.94:18,3,0	0/1:12,0:5:10.95:11,0,19	0/0:14,0:6:3:0,3,27	0/1:18,1:19:16.32:16,0,411	0/0:28,0:29:15.39:0,15,185	0/1:21,0:21:13.30:16,0,13	1/1:40,0:38:36.39:321,36,0	0/0:25,0:25:51.13:0,51,713	1/1:19,0:19:20.94:128,21,0	1/1:17,0:17:0.79:2,1,0	0/0:36,2:38:53.58:0,54,1161	0/0:27,0:27:61.37:0,61,841	0/0:21,2:23:6.43:0,6,578	0/0:36,0:36:5.91:0,6,51	0/1:21,0:21:34.95:35,0,36	0/1:36,0:33:17.29:17,0,62	0/1:25,2:26:91.99:92,0,643	1/1:20,0:19:11.27:91,11,0	0/1:18,0:18:2.84:3,0,7	0/0:22,0:22:0:0,0,0	0/0:23,0:23:40.07:0,40,608	0/0:21,0:21:45.12:0,45,660	0/0:44,0:44:91.26:0,91,1315	0/0:14,0:14:14.99:0,15,135	1/1:13,0:13:19.25:98,19,0	1/1:11,0:11:9.88:97,10,0	0/0:5,0:5:2.96:0,3,19
chr10	84551601	.	T	TCACACA	1686.35	PASS	AB=0.879;AC=20;AF=0.370;AN=54;BaseQRankSum=8.424;DP=629;FS=6.601;HRun=0;HaplotypeScore=193.4019;InbreedingCoeff=0.3493;MQ=50.79;MQ0=6;MQRankSum=-6.170;QD=5.66;ReadPosRankSum=-3.505;VQSLOD=1.5393;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:44,1:45:18.58:379,19,0	0/1:5,0:5:11.75:12,0,16	0/1:8,0:5:13.36:13,0,46	0/0:12,0:4:5.04:0,5,33	0/0:22,0:22:54.15:0,54,1020	0/0:25,0:25:24.06:0,24,376	1/1:23,2:25:18.18:353,18,0	1/1:42,0:39:30.95:489,31,0	0/0:25,0:25:59.68:0,60,1314	0/1:24,0:25:51.91:52,0,56	0/1:8,0:16:20.52:21,0,36	0/0:36,0:36:93.24:0,93,1942	0/0:26,0:26:66.67:0,67,1395	0/0:22,0:22:60.19:0,60,1233	0/0:33,0:33:14.63:0,15,284	0/1:27,0:29:65.70:66,0,135	0/1:29,0:28:58.10:58,0,209	0/0:29,0:28:62.57:0,63,1566	0/1:15,1:16:16.05:127,0,16	0/1:6,4:13:0.46:0,0,1	1/1:18,1:19:0.47:1,0,0	0/0:22,0:22:54.12:0,54,1132	0/0:22,0:22:51.17:0,51,1153	0/0:45,0:45:99:0,123,2573	0/0:11,0:11:18.03:0,18,231	1/1:11,0:10:17.58:71,18,0	1/1:7,4:11:7.48:222,7,0	./.
chr10	84551603	.	T	TCA	2366.75	PASS	AB=0.736;AC=31;AF=0.554;AN=56;BaseQRankSum=9.233;DP=656;FS=20.305;HRun=0;HaplotypeScore=165.7616;InbreedingCoeff=0.6420;MQ=50.09;MQ0=6;MQRankSum=-2.875;QD=6.63;ReadPosRankSum=-5.342;VQSLOD=0.9681;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:44,0:44:31.32:238,31,0	1/1:5,0:5:8.95:87,9,0	1/1:8,0:5:4.41:14,4,0	0/0:15,0:5:5.62:0,6,36	0/0:21,0:21:38.80:0,39,362	0/1:7,18:26:73.20:143,0,73	1/1:26,0:26:16.77:122,17,0	1/1:45,0:42:35.81:291,36,0	0/0:23,0:23:56.59:0,57,588	1/1:25,0:25:48.18:467,48,0	1/1:16,0:16:9.49:119,9,0	0/0:39,0:38:77.81:0,78,823	0/0:27,0:27:6.90:0,7,505	0/0:21,0:22:43.45:0,43,430	0/0:34,0:34:13.77:0,14,106	1/1:31,0:30:18.69:504,19,0	0/1:32,0:29:19.12:158,0,19	0/0:28,0:28:64.79:0,65,592	1/1:14,0:14:14.88:98,15,0	1/1:15,0:15:2.29:7,2,0	1/1:14,0:25:0.47:1,0,0	0/0:21,0:21:48.09:0,48,522	0/0:23,0:23:51.05:0,51,528	0/0:44,0:45:92.99:0,93,979	0/1:5,6:12:19.46:41,0,19	1/1:15,0:14:24.01:148,24,0	1/1:13,0:13:10.84:105,11,0	1/1:4,0:4:3:26,3,0
chr10	84552565	.	TAC	T	267.06	PASS	AB=0.944;AC=15;AF=0.288;AN=52;BaseQRankSum=3.285;DP=493;FS=0.948;HRun=0;HaplotypeScore=63.2823;InbreedingCoeff=0.2206;MQ=61.33;MQ0=5;MQRankSum=0.876;QD=1.28;ReadPosRankSum=1.804;VQSLOD=1.3631;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:20:2.60:10,3,0	0/0:4,0:4:6.02:0,6,78	./.	./.	0/0:14,0:13:3.92:0,4,71	1/1:9,0:11:2.84:14,3,0	1/1:25,5:35:20.88:206,21,0	0/0:19,0:18:5.95:0,6,42	0/0:18,0:18:2.99:0,3,24	0/0:15,0:15:11.93:0,12,107	0/0:8,0:8:5.99:0,6,50	0/1:21,1:23:43.50:44,0,94	0/0:14,0:17:9.02:0,9,114	0/0:16,0:16:12.02:0,12,153	0/0:42,0:41:26.98:0,27,249	0/0:20,0:24:9.02:0,9,114	0/0:12,0:15:8.67:0,9,62	0/0:13,0:13:26.88:0,27,277	0/0:17,0:17:3:0,3,27	0/1:10,1:11:25.98:26,0,37	0/1:40,4:43:11.06:11,0,175	0/1:10,0:10:14.67:15,0,16	0/0:12,0:11:5.99:0,6,63	0/1:26,1:27:40.28:40,0,173	0/0:8,0:8:0:0,0,0	1/1:20,0:20:1.55:4,2,0	0/0:10,0:9:3.93:0,4,25	1/1:2,0:6:8.52:42,9,0
chr10	84552611	.	C	CAC	191.73	PASS	AB=1.000;AC=20;AF=0.417;AN=48;BaseQRankSum=-3.526;DP=667;FS=2.737;HRun=0;HaplotypeScore=93.0111;InbreedingCoeff=0.1407;MQ=65.67;MQ0=9;MQRankSum=0.829;QD=0.61;ReadPosRankSum=-2.638;VQSLOD=1.5595;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:0.89:0,1,2	1/1:8,0:7:5.99:48,6,0	1/1:23,0:17:0.47:1,0,0	./.	0/0:13,0:13:6.02:0,6,64	0/0:16,0:15:2.84:0,3,14	0/0:31,0:31:19.42:0,19,92	1/1:24,0:24:0.68:2,1,0	./.	0/1:26,0:26:24.29:39,0,24	./.	0/0:39,0:39:17.70:0,18,137	0/1:27,0:26:17.78:18,0,54	0/1:27,0:27:14.93:15,0,55	1/1:37,8:46:11.58:113,12,0	0/1:23,0:23:34.88:35,0,54	0/1:17,0:17:25.45:38,0,25	0/1:20,0:20:5.96:6,0,140	1/1:23,0:23:0.47:1,0,0	0/0:21,0:21:5.85:0,6,46	0/0:55,0:54:11.85:0,12,103	0/1:14,0:14:0:0,0,0	0/0:20,0:19:2.99:0,3,23	0/0:37,0:35:17.79:0,18,158	./.	0/1:23,0:23:0.06:0,0,0	1/1:14,0:14:0.94:2,1,0	0/0:14,0:14:8.52:0,9,42
chr10	84552970	.	AAG	A	2757.11	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=-1.149;DP=494;FS=16.507;HRun=0;HaplotypeScore=94.9649;InbreedingCoeff=0.6957;MQ=45.84;MQ0=14;MQRankSum=-4.219;QD=8.67;ReadPosRankSum=-5.049;VQSLOD=1.0439;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:25:29.37:273,29,0	1/1:5,1:6:14.60:124,15,0	0/0:27,0:7:10.94:0,11,115	0/0:26,0:5:11.84:0,12,113	0/0:15,0:13:24.69:0,25,286	0/1:16,0:15:3.93:48,0,4	1/1:11,0:9:4.55:45,5,0	1/1:16,0:15:34.46:211,34,0	0/0:12,0:11:20.78:0,21,187	1/1:18,2:19:43.31:346,43,0	1/1:15,0:14:27.39:186,27,0	0/0:22,0:22:20.09:0,20,379	0/1:17,0:17:6.05:6,0,290	0/1:11,0:11:6.34:6,0,71	0/1:18,0:17:45.80:46,0,140	1/1:12,0:11:24.16:155,24,0	1/1:21,2:21:36.47:327,36,0	0/0:24,0:24:38.18:0,38,397	1/1:23,0:20:34.91:255,35,0	1/1:18,0:16:30.67:192,31,0	1/1:4,0:4:7.24:53,7,0	0/0:16,0:16:31.13:0,31,246	0/0:17,1:17:12.06:0,12,327	0/0:16,0:16:27.76:0,28,261	1/1:24,0:21:31.27:252,31,0	1/1:20,0:20:43.52:244,44,0	1/1:22,0:18:15.07:134,15,0	1/1:12,0:11:12.22:61,12,0
chr10	84552971	.	AG	A	3871.25	PASS	AB=0.969;AC=36;AF=0.643;AN=56;BaseQRankSum=1.620;DP=492;FS=31.080;HRun=1;HaplotypeScore=84.9056;InbreedingCoeff=0.5806;MQ=46.34;MQ0=14;MQRankSum=-7.025;QD=11.25;ReadPosRankSum=-3.419;VQSLOD=-0.3324;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:25:54.79:364,55,0	1/1:4,1:5:14.28:84,14,0	0/0:27,0:7:10.35:0,10,104	0/0:25,0:5:11.70:0,12,113	0/0:14,1:13:6.81:0,7,201	1/1:16,0:15:33.45:167,33,0	1/1:11,0:9:20.32:124,20,0	1/1:17,0:16:44:292,44,0	0/0:12,0:11:1.40:0,1,109	1/1:15,3:17:43.10:312,43,0	1/1:11,2:12:28.87:196,29,0	0/1:22,1:23:24.41:24,0,276	0/0:17,0:17:2.61:0,3,213	0/1:10,1:11:8.57:9,0,50	0/1:19,0:18:99:100,0,123	1/1:9,1:9:26.59:203,27,0	1/1:20,2:21:42.69:288,43,0	0/1:24,0:24:6.66:7,0,256	1/1:23,0:20:50.68:355,51,0	1/1:17,1:16:41.35:250,41,0	1/1:4,0:4:8.94:69,9,0	0/0:16,0:16:4.64:0,5,153	0/0:19,0:18:26.11:0,26,306	0/0:16,0:16:16.69:0,17,200	1/1:24,0:21:51.56:332,52,0	1/1:20,1:21:55.63:355,56,0	1/1:22,0:18:39.51:243,40,0	1/1:12,1:12:12.74:98,13,0
chr10	84552974	.	A	AG	240.94	PASS	AB=0.625;AC=3;AF=0.054;AN=56;BaseQRankSum=0.701;DP=511;FS=12.323;HRun=0;HaplotypeScore=102.7864;InbreedingCoeff=0.6689;MQ=49.95;MQ0=14;MQRankSum=2.631;QD=6.18;ReadPosRankSum=1.174;VQSLOD=2.5375;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:24:52.48:0,52,358	0/0:5,0:5:14.89:0,15,115	0/0:29,0:9:20.99:0,21,236	0/0:26,0:5:12.04:0,12,163	0/0:18,0:16:39.10:0,39,485	0/0:16,0:15:37.11:0,37,239	0/0:13,0:11:26.70:0,27,205	0/0:21,0:20:41.69:0,42,272	0/0:12,0:11:27.42:0,27,331	0/0:20,0:19:29.88:0,30,199	0/0:10,0:9:17.99:0,18,124	0/0:22,0:22:62.09:0,62,704	0/0:18,0:18:48:0,48,576	0/0:12,0:12:14.96:0,15,155	0/0:19,0:18:49.74:0,50,476	0/0:11,0:10:6.82:0,7,119	0/0:22,0:20:27.51:0,28,234	0/0:25,0:25:65.40:0,65,772	0/0:24,0:21:48.51:0,49,332	0/0:18,0:16:43.06:0,43,274	0/0:5,0:5:8.95:0,9,66	0/0:15,0:15:37.98:0,38,431	0/0:19,0:18:50.49:0,50,655	0/0:16,0:16:35.63:0,36,414	0/0:23,0:20:43.82:0,44,299	1/1:7,16:24:17.68:276,18,0	0/0:24,0:20:42.23:0,42,300	0/1:6,9:14:3.61:68,0,4
chr10	84553223	.	CCAGACTGTAAGCCCCCTGCCTCTGCAGTA	C	19545.76	PASS	AB=0.775;AC=22;AF=0.393;AN=56;BaseQRankSum=14.346;DP=650;FS=7.635;HRun=0;HaplotypeScore=476.4703;InbreedingCoeff=0.7876;MQ=96.52;MQ0=0;MQRankSum=-13.406;QD=80.77;ReadPosRankSum=5.755;VQSLOD=2.3445;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.31:0,90,9191	1/1:1,5:6:12.04:874,12,0	0/0:38,0:38:99:0,111,7585	0/0:35,0:35:96.32:0,96,6539	0/0:12,0:12:36.12:0,36,3918	0/0:15,0:15:42.14:0,42,5099	1/1:17,10:27:21.07:1382,21,0	1/1:18,0:18:3.01:60,3,0	0/0:23,0:23:69.24:0,69,8144	1/1:8,16:24:45.15:2783,45,0	1/1:7,7:14:6.91:319,7,0	0/0:41,0:41:99:0,111,12897	0/0:27,0:27:81.28:0,81,8794	0/0:30,0:30:90.31:0,90,10469	0/0:32,0:32:90.31:0,90,10172	0/1:10,23:33:98.24:4611,0,98	1/1:6,9:15:21.07:1630,21,0	0/0:30,0:30:87.30:0,87,10364	1/1:6,7:13:20.42:1421,20,0	1/1:7,10:17:21.07:1304,21,0	1/1:15,7:21:6.02:309,6,0	0/0:14,0:14:42.14:0,42,3789	0/0:16,0:15:39.13:0,39,3956	0/0:33,0:33:99:0,99,12696	0/0:23,0:23:69.24:0,69,7803	0/1:24,1:25:99:161,0,6525	1/1:2,26:28:66.23:4693,66,0	0/0:8,0:8:24.08:0,24,3051
chr10	84553250	.	GT	G	802.18	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.047;DP=615;FS=8.792;HRun=1;HaplotypeScore=170.2103;InbreedingCoeff=0.9199;MQ=101.00;MQ0=1;MQRankSum=-12.478;QD=6.47;ReadPosRankSum=6.258;VQSLOD=0.2903;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,2055	1/1:5,0:5:9.67:60,10,0	0/0:36,0:36:99:0,105,1561	0/0:43,0:39:88.22:0,88,1621	0/0:17,0:17:42.14:0,42,662	0/0:18,0:18:54.18:0,54,863	1/1:10,0:10:10.89:82,11,0	1/1:0,4:4:11.97:101,12,0	0/0:24,0:24:72.25:0,72,1151	1/1:16,0:16:30.65:123,31,0	1/1:7,0:7:2.22:7,2,0	0/0:41,0:41:99:0,123,1941	0/0:25,0:25:69.20:0,69,1050	0/0:34,0:34:99:0,102,1605	0/0:32,0:32:84.29:0,84,1340	1/1:23,0:23:45.19:176,45,0	1/1:9,0:9:16.31:67,16,0	0/0:32,0:32:93.32:0,93,1486	1/1:7,0:7:13.60:44,14,0	1/1:10,0:10:11.10:36,11,0	1/1:7,0:7:2.22:7,2,0	0/0:17,0:17:48.16:0,48,767	0/0:18,0:17:45.15:0,45,719	0/0:37,0:37:99:0,111,1744	0/0:28,0:27:78.27:0,78,1246	0/0:33,0:33:91.35:0,91,1528	1/1:26,0:26:52.79:308,53,0	0/0:12,0:12:36.12:0,36,575
chr10	84553272	.	ATCTGCTCTGAC	A	1939.91	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.202;DP=732;FS=8.704;HRun=0;HaplotypeScore=332.5704;InbreedingCoeff=0.9676;MQ=93.34;MQ0=1;MQRankSum=-5.333;QD=80.83;ReadPosRankSum=-0.399;VQSLOD=2.4550;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,5550	0/0:8,0:8:24.08:0,24,1273	0/0:32,0:32:80.40:0,80,3447	0/0:49,0:44:78.45:0,78,2608	0/0:17,0:17:39.13:0,39,2028	0/0:19,0:19:57.16:0,57,2828	0/0:27,0:27:60.21:0,60,3254	0/0:27,0:27:75.18:0,75,3490	0/0:23,0:23:69.22:0,69,3553	0/0:27,0:26:78.27:0,78,4107	0/0:9,0:9:12.04:0,12,583	0/0:45,0:45:99:0,126,6489	0/0:25,0:25:75.23:0,75,3783	0/0:32,0:32:96.32:0,96,5175	1/1:2,22:24:60.20:2035,60,0	0/0:36,0:36:99:0,99,5412	0/0:20,0:20:51.17:0,51,2518	0/0:34,0:34:87.28:0,87,4480	0/0:24,0:24:69.19:0,69,3132	0/0:14,0:14:33.11:0,33,1821	0/0:24,0:24:30.05:0,30,1559	0/0:18,0:18:51.15:0,51,2379	0/0:24,0:23:63.22:0,63,3403	0/0:37,0:37:99:0,105,5685	0/0:26,0:25:60.18:0,60,3077	0/0:28,0:28:78.25:0,78,4140	0/0:28,0:28:81.28:0,81,4295	0/0:17,0:17:48.16:0,48,2490
chr10	84554889	.	AGGGGAGTTCCACACTCC	A	2204.54	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.652;DP=709;FS=6.931;HRun=0;HaplotypeScore=312.3362;InbreedingCoeff=0.9767;MQ=82.77;MQ0=0;MQRankSum=-6.689;QD=66.80;ReadPosRankSum=1.144;VQSLOD=2.3873;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,8938	0/0:6,0:6:18.05:0,18,1227	0/0:20,0:20:48.16:0,48,2650	0/0:26,0:26:63.18:0,63,3341	0/0:18,0:18:45.15:0,45,3358	1/1:7,10:17:27.09:1307,27,0	0/0:44,0:44:99:0,129,9673	0/0:29,0:29:81.28:0,81,5531	0/0:34,0:34:93.32:0,93,6893	0/0:23,0:23:54.18:0,54,4107	0/0:6,0:6:12.04:0,12,737	0/0:40,0:40:99:0,99,7290	0/0:25,0:25:72.25:0,72,5113	0/0:28,0:28:81.28:0,81,6436	0/0:39,0:39:99:0,111,8564	0/0:31,0:31:78.27:0,78,5453	0/0:29,0:29:75.20:0,75,4926	0/0:20,0:20:57.20:0,57,4068	0/0:26,0:26:72.25:0,72,4932	0/0:19,0:19:51.18:0,51,3927	0/0:49,0:49:99:0,126,9194	0/0:29,0:29:75.26:0,75,5170	0/0:17,0:17:51.17:0,51,3522	0/0:29,0:29:84.29:0,84,6571	1/1:7,9:16:21.07:1018,21,0	0/0:20,0:20:51.18:0,51,3949	0/0:17,0:17:45.15:0,45,3458	0/0:8,0:8:24.08:0,24,1870
chr10	84555262	.	C	CG	11810.44	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-14.314;DP=561;FS=2.787;HRun=3;HaplotypeScore=53.4905;InbreedingCoeff=0.9897;MQ=83.11;MQ0=0;MQRankSum=-1.775;QD=37.02;ReadPosRankSum=-0.835;VQSLOD=4.9661;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,41:42:99:1591,114,0	1/1:0,8:8:17.96:251,18,0	0/0:16,0:16:26.25:0,26,332	0/0:18,0:18:15.83:0,16,370	0/0:10,0:10:16.11:0,16,276	1/1:0,15:15:39.13:545,39,0	1/1:0,30:30:87.29:1215,87,0	1/1:0,25:25:75.12:967,75,0	0/0:15,0:15:42.11:0,42,490	1/1:0,20:20:57.19:790,57,0	1/1:1,4:5:12.04:163,12,0	0/0:24,0:24:69.15:0,69,798	0/0:19,0:19:51.16:0,51,608	0/0:34,0:34:99:0,102,1144	0/0:24,0:24:66.17:0,66,775	1/1:0,16:17:45.15:621,45,0	1/1:1,21:22:63.21:880,63,0	0/0:25,0:25:69.21:0,69,827	1/1:2,18:20:54.08:710,54,0	1/1:0,13:13:32.93:391,33,0	1/1:3,53:56:99:2032,147,0	0/0:13,0:13:33.10:0,33,390	0/0:8,0:8:21.04:0,21,230	0/0:36,0:36:99:0,105,1204	1/1:2,9:11:27.09:377,27,0	1/1:1,14:15:42.10:542,42,0	1/1:1,9:10:27.09:377,27,0	1/1:1,9:10:27.07:358,27,0
chr10	84555767	.	CT	C	10249.71	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=19.677;DP=747;FS=0.280;HRun=7;HaplotypeScore=97.2016;InbreedingCoeff=0.9999;MQ=78.89;MQ0=0;MQRankSum=-3.092;QD=26.90;ReadPosRankSum=1.552;VQSLOD=4.9957;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,30:35:87.19:888,87,0	1/1:0,13:13:39.09:398,39,0	0/0:20,0:20:57.11:0,57,655	0/0:13,0:13:33.03:0,33,380	0/0:41,0:41:99:0,111,1394	1/1:0,11:11:30.07:306,30,0	1/1:2,22:24:66.15:673,66,0	1/1:6,26:32:78.10:771,78,0	0/0:20,0:20:57.16:0,57,691	1/1:2,35:37:99:1071,105,0	1/1:5,23:28:66.14:673,66,0	0/0:34,0:34:96.30:0,96,1197	0/0:31,0:31:93.28:0,93,1156	0/0:24,0:24:63.20:0,63,791	0/0:39,0:39:99:0,114,1421	1/1:2,32:34:93.06:949,93,0	1/1:0,37:37:99:1102,108,0	0/0:19,0:19:54.13:0,54,661	1/1:4,17:21:51.09:513,51,0	1/1:3,29:32:87.20:887,87,0	1/1:0,22:22:66.15:673,66,0	0/0:28,0:28:75.24:0,75,944	0/0:32,0:32:93.30:0,93,1170	0/0:18,0:18:54.17:0,54,679	1/1:3,22:25:63.14:643,63,0	0/0:30,1:31:59.71:0,60,1060	1/1:4,26:30:69.15:704,69,0	0/0:16,0:16:48.11:0,48,564
chr10	84556922	.	A	AGGGCT	9187.62	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-0.079;DP=598;FS=0.894;HRun=0;HaplotypeScore=129.0305;InbreedingCoeff=0.9798;MQ=76.88;MQ0=0;MQRankSum=-9.376;QD=32.58;ReadPosRankSum=-3.928;VQSLOD=4.1200;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,15:46:36.12:939,36,0	1/1:2,2:4:9.03:248,9,0	0/0:25,0:24:20.11:0,20,299	0/0:33,0:33:44.74:0,45,730	0/0:12,0:12:24.05:0,24,411	1/1:9,6:15:18.06:514,18,0	1/1:12,12:24:30.10:835,30,0	1/1:24,5:32:36.07:737,36,0	0/0:20,0:20:33.10:0,33,575	1/1:12,7:20:30.10:835,30,0	1/1:4,5:9:12.04:315,12,0	0/0:39,0:39:87.30:0,87,1618	0/0:18,0:18:33.07:0,33,511	0/0:25,0:25:57.18:0,57,1028	0/0:29,0:29:60.19:0,60,1069	1/1:8,9:17:30.10:827,30,0	1/1:8,6:15:15.05:428,15,0	0/0:17,0:17:39.11:0,39,680	1/1:7,10:19:45.06:1056,45,0	1/1:10,4:14:15.05:388,15,0	1/1:22,10:33:29.15:855,29,0	0/0:19,0:19:27.09:0,27,502	0/0:18,0:18:30.10:0,30,558	0/0:31,0:31:45.15:0,45,821	1/1:11,7:18:24.08:638,24,0	0/0:15,0:15:27.09:0,27,501	1/1:10,6:16:21.07:572,21,0	0/0:12,0:12:33.08:0,33,550
chr10	84557752	.	TCTCCCA	T	2734.62	PASS	AC=22;AF=0.440;AN=50;BaseQRankSum=11.447;DP=499;FS=0.561;HRun=0;HaplotypeScore=131.6448;InbreedingCoeff=0.9193;MQ=73.48;MQ0=2;MQRankSum=-10.563;QD=14.47;ReadPosRankSum=1.249;VQSLOD=2.9216;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:6,0:6:9.03:157,9,0	0/0:35,0:24:63.69:0,64,1972	0/0:33,0:21:57.20:0,57,1874	0/0:13,0:13:39.12:0,39,1321	1/1:14,0:14:3.01:53,3,0	1/1:17,0:17:12.51:182,13,0	1/1:21,0:21:24.02:358,24,0	0/0:18,0:18:45.15:0,45,1596	1/1:18,0:18:42.14:738,42,0	./.	0/0:26,0:26:72.25:0,72,2563	0/0:18,0:18:51.18:0,51,1713	0/0:16,0:16:48.16:0,48,1698	0/0:18,0:18:51.18:0,51,1758	1/1:15,4:19:15.05:259,15,0	1/1:29,2:30:29.94:516,30,0	0/0:11,0:11:24.08:0,24,861	1/1:13,0:12:18.05:277,18,0	./.	1/1:22,0:22:6.49:107,6,0	0/0:17,0:17:45.15:0,45,1566	0/0:11,0:11:27.09:0,27,971	0/0:37,0:37:99:0,102,3583	1/1:8,1:9:6.01:62,6,0	0/0:22,0:22:66.23:0,66,2282	1/1:19,0:18:15.05:226,15,0	0/0:6,0:6:18.04:0,18,565
chr10	84557753	.	CTCCCACTGGGA	C	5887.51	PASS	AC=22;AF=0.440;AN=50;BaseQRankSum=9.910;DP=494;FS=0.000;HRun=0;HaplotypeScore=157.8951;InbreedingCoeff=0.9212;MQ=70.97;MQ0=2;MQRankSum=-10.453;QD=31.48;ReadPosRankSum=1.156;VQSLOD=3.9377;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,4:6:9.03:320,9,0	0/0:34,0:22:63.22:0,63,2589	0/0:32,0:20:57.20:0,57,2728	0/0:13,0:13:39.12:0,39,1891	1/1:3,11:14:3.01:107,3,0	1/1:4,1:17:15.05:415,15,0	1/1:11,9:20:24.06:705,24,0	0/0:18,0:18:45.15:0,45,2422	1/1:3,15:18:42.14:1501,42,0	./.	0/0:24,0:24:72.25:0,72,3972	0/0:18,0:18:51.18:0,51,2478	0/0:16,0:16:48.16:0,48,2648	0/0:18,0:18:51.18:0,51,2398	1/1:5,13:18:15.05:498,15,0	1/1:10,21:30:30.04:1000,30,0	0/0:11,0:11:24.08:0,24,1286	1/1:4,9:12:18.05:541,18,0	./.	1/1:12,10:22:6.49:215,6,0	0/0:16,0:16:45:0,45,2222	0/0:11,0:11:27.09:0,27,1373	0/0:38,0:38:99:0,102,5510	1/1:5,4:9:6.01:116,6,0	0/0:23,0:23:69.24:0,69,3599	1/1:0,0:19:15.05:470,15,0	0/0:6,0:6:18.04:0,18,676
chr10	84557754	.	TCCCA	T	1703.81	PASS	AB=1.000;AC=23;AF=0.442;AN=52;BaseQRankSum=11.392;DP=442;FS=0.000;HRun=0;HaplotypeScore=109.0186;InbreedingCoeff=0.8823;MQ=74.04;MQ0=2;MQRankSum=-11.126;QD=11.75;ReadPosRankSum=1.939;VQSLOD=2.9217;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:4,0:4:9.03:104,9,0	0/0:35,0:22:63.21:0,63,1578	0/0:32,0:20:57.20:0,57,1475	0/0:13,0:13:36.12:0,36,1006	1/1:11,3:14:3.01:36,3,0	1/1:13,0:14:11.89:109,12,0	1/1:9,0:9:21.02:230,21,0	0/0:17,0:17:45.15:0,45,1234	1/1:15,0:15:42.12:483,42,0	./.	0/0:24,0:24:72.25:0,72,1993	0/0:18,0:18:51.16:0,51,1349	0/0:16,0:16:48.16:0,48,1340	0/0:18,0:18:51.16:0,51,1368	1/1:17,0:17:15.04:167,15,0	1/1:23,0:22:29.93:353,30,0	0/0:11,0:11:24.08:0,24,668	1/1:9,0:8:15.04:168,15,0	0/1:4,0:4:0:0,0,0	1/1:10,0:10:6.49:70,6,0	0/0:16,0:16:45.14:0,45,1199	0/0:11,0:11:30.10:0,30,801	0/0:38,0:38:99:0,99,2766	1/1:6,1:7:3.01:35,3,0	0/0:23,0:23:69.23:0,69,1820	1/1:19,0:18:14.86:147,15,0	0/0:6,0:6:15.05:0,15,419
chr10	84557761	.	GGGA	G	1687.80	PASS	AC=22;AF=0.440;AN=50;BaseQRankSum=11.428;DP=434;FS=3.671;HRun=0;HaplotypeScore=100.3926;InbreedingCoeff=0.9017;MQ=66.60;MQ0=3;MQRankSum=-10.742;QD=11.72;ReadPosRankSum=0.570;VQSLOD=2.8222;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:4,0:4:9.03:107,9,0	0/0:31,0:17:45.13:0,45,866	0/0:29,0:17:51.17:0,51,1143	0/0:12,0:12:33.10:0,33,694	1/1:13,1:14:3.01:36,3,0	1/1:14,0:14:14.91:121,15,0	1/1:10,0:9:18.06:216,18,0	0/0:19,0:18:44.51:0,45,968	1/1:15,0:15:42.13:504,42,0	./.	0/0:23,0:23:69.24:0,69,1630	0/0:19,0:19:51.12:0,51,1045	0/0:16,0:16:48.10:0,48,1098	0/0:19,0:19:46.03:0,46,899	1/1:13,4:17:15.01:171,15,0	1/1:21,2:22:29.30:335,29,0	0/0:12,0:12:24.07:0,24,494	1/1:9,0:8:14.72:156,15,0	./.	1/1:10,0:10:6.02:72,6,0	0/0:14,0:14:38.60:0,39,769	0/0:10,0:10:27.09:0,27,549	0/0:38,0:38:99:0,102,2300	1/1:6,1:8:5.98:48,6,0	0/0:22,0:22:23.15:0,23,1355	1/1:19,0:18:14.88:121,15,0	0/0:3,0:3:6.02:0,6,141
chr10	84557764	.	ATG	A	117.77	PASS	AB=0.906;AC=12;AF=0.250;AN=48;BaseQRankSum=4.934;DP=526;FS=5.337;HRun=0;HaplotypeScore=113.7819;InbreedingCoeff=0.2033;MQ=59.13;MQ0=3;MQRankSum=-0.860;QD=0.65;ReadPosRankSum=3.302;VQSLOD=1.8228;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:0:0,0,0	0/0:6,0:5:2.99:0,3,24	./.	./.	0/1:13,0:13:0.01:0,0,0	0/0:22,0:22:0:0,0,0	1/1:14,0:15:4.52:26,5,0	0/0:18,0:17:2.66:0,3,5	0/1:18,3:20:20.22:20,0,81	0/0:19,0:19:9.24:0,9,52	0/0:7,0:7:3.48:0,3,40	0/0:24,0:24:12.03:0,12,155	0/0:20,0:22:3.93:0,4,180	0/0:15,0:16:3.95:0,4,204	1/1:10,0:19:14.20:70,14,0	0/0:21,0:21:7.99:0,8,33	0/0:36,0:34:9.16:0,9,68	0/1:9,4:13:20.23:20,0,96	./.	0/0:6,0:6:2.22:0,2,7	./.	0/1:16,2:18:23.21:23,0,39	0/0:10,0:10:3.01:0,3,44	0/1:37,4:42:19.31:19,0,237	0/0:13,0:12:2.11:0,2,25	0/0:29,0:28:29.93:0,30,286	1/1:20,0:19:14.01:68,14,0	0/0:4,0:4:3.01:0,3,35
chr10	84558294	.	A	ACGACGACGACGACGGTGG	17538.28	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-3.746;DP=382;FS=1.897;HRun=0;HaplotypeScore=229.0170;InbreedingCoeff=0.2514;MQ=63.24;MQ0=1;MQRankSum=-9.250;QD=58.46;ReadPosRankSum=-3.580;VQSLOD=3.8068;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:23:28.06:2206,28,0	1/1:5,2:9:24.04:1308,24,0	0/0:16,0:15:45.15:0,45,1971	0/0:9,0:7:17.99:0,18,542	0/0:22,0:22:66.23:0,66,2734	1/1:8,0:8:21.07:438,21,0	1/1:9,0:9:15.02:321,15,0	1/1:9,0:9:24.08:840,24,0	0/1:12,0:12:42.24:42,0,1267	1/1:18,2:30:87.30:4292,87,0	1/1:11,6:21:42.14:2523,42,0	0/1:16,0:16:90.01:90,0,1297	0/1:15,0:15:69.28:69,0,1192	0/1:15,0:15:83.96:84,0,943	0/0:19,0:19:57.20:0,57,1910	1/1:4,6:13:39.13:2537,39,0	1/1:2,4:8:6.02:534,6,0	0/1:17,0:17:23.29:23,0,1818	1/1:2,0:3:9.03:463,9,0	1/1:6,0:7:15.01:410,15,0	1/1:4,0:4:3.01:58,3,0	0/1:21,0:20:82.29:82,0,1664	0/0:16,0:16:39.22:0,39,1629	0/1:13,0:13:49.94:50,0,1102	1/1:9,0:9:15.05:328,15,0	0/1:17,0:17:78.43:78,0,1356	1/1:5,0:5:15.05:757,15,0	0/1:16,0:16:6.60:7,0,1037
chr10	84558963	.	G	GAA	3507.36	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=6.053;DP=513;FS=2.837;HRun=10;HaplotypeScore=93.6585;InbreedingCoeff=0.8245;MQ=63.63;MQ0=7;MQRankSum=0.474;QD=16.78;ReadPosRankSum=-1.383;VQSLOD=2.3431;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:22:42.42:149,42,0	0/0:8,0:8:18.03:0,18,182	0/1:15,0:8:3.40:3,0,50	0/1:19,0:14:28.89:29,0,86	0/0:25,0:26:52.12:0,52,591	1/1:1,0:12:27.45:97,27,0	1/1:4,9:13:33.11:490,33,0	1/1:15,16:30:65.53:840,66,0	0/0:14,0:14:35.74:0,36,345	0/0:22,0:22:57.11:0,57,579	0/0:22,0:22:57.12:0,57,579	0/0:15,0:15:42.08:0,42,420	0/0:13,0:13:36.08:0,36,366	0/0:11,0:11:27.06:0,27,274	0/0:16,0:16:39.04:0,39,383	0/0:19,0:19:48.03:0,48,464	0/0:26,0:26:60.08:0,60,600	0/0:33,0:33:84.08:0,84,825	1/1:3,11:16:38.29:485,38,0	1/1:6,16:22:51.08:695,51,0	1/1:1,4:5:9.03:133,9,0	0/0:8,0:8:21.02:0,21,214	0/0:15,0:16:35.60:0,36,347	0/0:12,0:12:26.96:0,27,255	1/1:4,1:26:2.03:145,2,0	0/0:28,0:26:66.13:0,66,669	1/1:2,19:24:32.59:441,33,0	0/0:13,0:14:26.78:0,27,327
chr10	84560017	.	CA	C	825.82	PASS	AB=1.000;AC=6;AF=0.125;AN=48;BaseQRankSum=5.370;DP=373;FS=0.696;HRun=9;HaplotypeScore=51.7010;InbreedingCoeff=0.4602;MQ=70.10;MQ0=4;MQRankSum=1.185;QD=12.90;ReadPosRankSum=0.852;VQSLOD=2.9621;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:14.58:0,15,87	0/0:4,0:4:2.96:0,3,19	0/0:11,0:9:6.01:0,6,64	0/1:10,0:10:0.81:1,0,59	0/0:48,0:48:99:0,107,1203	0/0:3,0:4:5.94:0,6,40	0/0:4,0:4:5.81:0,6,34	0/0:15,0:14:13.03:0,13,110	0/0:21,0:21:48.14:0,48,553	./.	./.	0/0:22,0:22:54.16:0,54,617	0/0:20,0:20:51.13:0,51,574	0/0:14,0:14:24.06:0,24,265	0/0:17,0:17:36.09:0,36,405	0/0:4,0:4:2.98:0,3,21	./.	0/0:25,0:25:66.18:0,66,750	0/1:7,0:6:0.22:0,0,33	0/0:5,0:6:2.53:0,3,19	./.	0/0:12,0:12:27.07:0,27,302	0/0:17,0:17:45.13:0,45,518	0/0:18,0:18:39.12:0,39,449	0/0:10,0:10:2.97:0,3,20	1/1:6,26:29:72.03:655,72,0	0/0:3,0:3:3.84:0,4,21	1/1:5,10:12:32.69:285,33,0
chr10	84560026	.	A	AAAAATG	1488.08	PASS	AB=1.000;AC=17;AF=0.327;AN=52;BaseQRankSum=6.500;DP=312;FS=21.176;HRun=0;HaplotypeScore=82.6181;InbreedingCoeff=0.7007;MQ=63.45;MQ0=4;MQRankSum=-8.327;QD=24.00;ReadPosRankSum=-3.318;VQSLOD=1.1620;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:18:9.03:254,9,0	./.	0/0:7,0:5:6:0,6,116	0/0:6,0:6:13.28:0,13,165	0/0:42,0:42:99:0,117,2456	1/1:1,0:1:3.01:40,3,0	1/1:0,0:3:6.02:130,6,0	1/1:6,9:19:40.44:842,40,0	0/0:19,0:19:54.15:0,54,1104	0/0:1,0:1:0:0,0,0	0/0:4,0:4:0.89:0,1,2	0/0:18,0:18:54.17:0,54,1167	0/0:19,0:19:57.19:0,57,1195	0/0:11,0:11:29.84:0,30,534	0/0:14,0:14:42.14:0,42,860	./.	0/1:5,0:5:17.84:19,0,18	0/0:23,0:23:69.24:0,69,1475	1/1:2,0:2:6.02:106,6,0	1/1:3,0:3:6.02:80,6,0	0/0:2,0:2:0.47:0,0,1	0/0:10,0:10:30.09:0,30,589	0/0:18,0:18:54.17:0,54,1115	0/0:13,0:13:39.13:0,39,871	1/1:2,1:4:8.99:99,9,0	0/0:29,0:26:71.18:0,71,1086	1/1:3,2:6:6.02:87,6,0	0/0:14,0:11:33.11:0,33,508
chr10	84560259	.	ACCCCC	A	930.93	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.155;DP=508;FS=3.500;HRun=5;HaplotypeScore=118.8148;InbreedingCoeff=0.9596;MQ=61.73;MQ0=2;MQRankSum=-6.437;QD=51.72;ReadPosRankSum=0.955;VQSLOD=1.1329;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.31:0,93,2986	0/0:3,0:3:9.03:0,9,300	0/0:26,0:15:39.13:0,39,1163	0/0:23,0:18:45.15:0,45,1418	0/0:16,0:16:48.16:0,48,1540	1/1:0,9:9:24.08:550,24,0	0/0:23,0:23:69.24:0,69,2264	0/0:30,0:30:90.31:0,90,2879	0/0:23,0:23:69.24:0,69,2248	0/0:13,0:13:33.11:0,33,1096	0/0:6,0:6:18.06:0,18,587	0/0:21,0:21:63.22:0,63,2048	0/0:25,0:25:75.24:0,75,2390	0/0:14,0:14:42.14:0,42,1398	0/0:15,0:15:45.15:0,45,1481	0/0:9,0:9:27.09:0,27,870	0/0:28,0:28:84.29:0,84,2674	0/0:24,0:24:72.25:0,72,2288	0/0:26,0:25:66.19:0,66,2038	0/0:6,0:6:18.06:0,18,600	0/0:41,0:41:99:0,123,4105	0/0:10,0:10:30.10:0,30,997	0/0:12,0:12:33.11:0,33,1107	0/0:11,0:11:33.07:0,33,1006	1/1:0,9:9:24.04:501,24,0	0/0:29,0:29:87.30:0,87,2843	0/0:14,0:14:42.14:0,42,1372	0/0:11,0:11:33.11:0,33,1099
chr10	84560407	.	CTTTTT	C	8529.82	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=15.540;DP=544;FS=4.746;HRun=13;HaplotypeScore=163.3192;InbreedingCoeff=0.9879;MQ=67.81;MQ0=1;MQRankSum=-16.011;QD=32.93;ReadPosRankSum=2.272;VQSLOD=2.2212;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,16:19:23.81:411,24,0	1/1:3,7:10:20.97:359,21,0	0/0:22,0:16:30.10:0,30,678	0/0:17,0:15:35.68:0,36,643	0/0:21,0:26:69.24:0,69,1783	1/1:3,13:16:35.99:560,36,0	1/1:1,20:21:51:870,51,0	1/1:13,16:27:44.03:719,44,0	0/0:19,0:20:54.17:0,54,1420	1/1:5,10:15:29.20:511,29,0	1/1:3,18:21:35.78:615,36,0	0/0:17,0:19:42.14:0,42,1140	0/0:17,0:17:48.16:0,48,1318	0/0:21,0:25:60.20:0,60,1601	0/0:25,0:26:78.25:0,78,2073	1/1:5,26:31:78.04:1332,78,0	1/1:3,11:14:17.32:354,17,0	0/0:16,0:17:33.11:0,33,886	1/1:3,14:17:42.13:717,42,0	1/1:2,20:22:32.52:544,33,0	1/1:3,4:7:8.83:153,9,0	0/0:19,0:21:60.20:0,60,1602	0/0:21,0:24:66.01:0,66,1794	0/0:15,0:16:42.14:0,42,1165	1/1:0,10:10:24:411,24,0	0/0:10,0:28:75.26:0,75,1422	1/1:7,19:26:59.79:973,60,0	0/0:2,0:6:18.06:0,18,334
chr10	84560861	.	G	GA	17524.80	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-6.414;DP=747;FS=9.933;HRun=1;HaplotypeScore=94.3259;InbreedingCoeff=0.9999;MQ=82.87;MQ0=0;MQRankSum=-2.471;QD=39.12;ReadPosRankSum=2.286;VQSLOD=4.8093;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,40:41:99:1457,99,0	1/1:0,12:12:36.12:539,36,0	0/0:25,0:24:66.15:0,66,819	0/0:21,0:21:57.10:0,57,702	0/0:28,0:28:78.22:0,78,982	1/1:2,26:28:72.20:1049,72,0	1/1:0,19:19:51.17:764,51,0	1/1:1,37:38:99:1593,111,0	0/0:23,0:23:66.16:0,66,798	1/1:0,28:28:78.26:1169,78,0	1/1:2,14:16:36.07:495,36,0	0/0:31,0:31:90.22:0,90,1097	0/0:27,0:27:78.25:0,78,1011	0/0:21,0:21:57.19:0,57,740	0/0:31,0:31:93.27:0,93,1177	1/1:1,39:40:99:1728,117,0	1/1:2,37:39:99:1560,105,0	0/0:11,0:11:33.11:0,33,427	1/1:1,18:19:57.19:853,57,0	1/1:3,16:19:51.08:695,51,0	1/1:1,36:37:96.33:1437,96,0	0/0:27,0:27:72.22:0,72,917	0/0:25,0:25:60.17:0,60,751	0/0:29,0:29:84.27:0,84,1090	1/1:2,30:32:84.16:1183,84,0	1/1:1,27:30:84.21:1146,84,0	1/1:3,29:32:75.25:1123,75,0	1/1:0,18:18:51.17:735,51,0
chr10	84560923	.	G	GGTTTGTTTGTTT	46206.32	PASS	AB=0.970;AC=29;AF=0.518;AN=56;BaseQRankSum=1.008;DP=823;FS=10.418;HRun=0;HaplotypeScore=274.6808;InbreedingCoeff=0.9182;MQ=71.81;MQ0=0;MQRankSum=-20.098;QD=98.31;ReadPosRankSum=-3.020;VQSLOD=2.7871;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,16:46:99:4837,111,0	1/1:4,3:7:21.07:833,21,0	0/0:35,0:35:57.03:0,57,1675	0/0:34,0:34:30.12:0,30,1994	0/0:30,0:30:87.26:0,87,2873	1/1:22,8:30:75.21:3287,75,0	1/1:18,10:28:69.24:3185,69,0	1/1:44,0:44:90.31:2823,90,0	0/0:30,0:30:78.27:0,78,2628	1/1:19,10:29:75.26:3305,75,0	1/1:11,12:25:60.20:2767,60,0	0/0:36,0:36:99:0,99,3089	0/0:21,0:21:57.19:0,57,1868	0/0:22,0:22:66.23:0,66,2276	0/0:35,0:35:93.30:0,93,2815	1/1:21,14:34:90.29:3919,90,0	1/1:24,7:31:72.23:3211,72,0	0/0:18,0:18:8.39:0,8,1269	1/1:21,5:27:57.67:2204,58,0	1/1:14,27:45:99:5930,117,0	1/1:22,5:27:57.19:2248,57,0	0/0:19,0:19:54.17:0,54,1758	0/0:33,0:33:84.29:0,84,2974	0/0:32,0:32:78.27:0,78,2443	1/1:20,8:28:66.22:2927,66,0	0/1:31,1:32:95.18:95,0,2647	1/1:22,13:35:99:4636,99,0	0/0:8,0:8:21.05:0,21,670
chr10	84564412	.	AT	A	2549.94	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=9.446;DP=327;FS=1.767;HRun=4;HaplotypeScore=65.3682;InbreedingCoeff=0.7678;MQ=53.93;MQ0=16;MQRankSum=-7.512;QD=12.75;ReadPosRankSum=0.180;VQSLOD=1.6778;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:15:12.83:308,13,0	1/1:0,3:2:3.01:34,3,0	0/1:21,0:6:0.95:1,0,56	0/0:38,0:13:21.13:0,21,178	0/0:17,0:16:45.15:0,45,628	1/1:2,1:24:40.50:183,41,0	1/1:1,2:2:3:25,3,0	1/1:16,13:26:56.63:443,57,0	0/0:4,0:4:6.02:0,6,84	1/1:4,8:11:15.88:276,16,0	1/1:2,10:12:29.10:301,29,0	0/0:12,0:11:33.10:0,33,444	0/0:6,0:5:12.04:0,12,168	0/0:5,0:4:12.04:0,12,167	0/0:8,0:8:0.53:0,1,16	1/1:1,7:8:14.93:166,15,0	1/1:7,4:8:18.02:182,18,0	0/0:26,0:24:66.14:0,66,881	1/1:13,4:13:23.22:130,23,0	1/1:3,5:8:17.37:147,17,0	1/1:1,1:2:3:25,3,0	0/0:1,0:1:3.01:0,3,42	0/0:3,0:3:9.02:0,9,109	0/0:7,0:7:21.07:0,21,293	1/1:2,0:13:12.66:75,13,0	1/1:4,7:11:13.64:239,14,0	1/1:3,5:8:17.18:133,17,0	1/1:1,2:3:8.86:84,9,0
chr10	84564415	.	TTATTTTA	T	1757.40	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=5.801;DP=327;FS=0.000;HRun=0;HaplotypeScore=93.4340;InbreedingCoeff=0.4799;MQ=53.09;MQ0=19;MQRankSum=-5.464;QD=8.83;ReadPosRankSum=-1.769;VQSLOD=1.5670;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:14.57:188,15,0	1/1:3,0:2:2.37:8,2,0	0/1:20,0:5:12.58:13,0,22	0/0:37,0:12:11.43:0,11,139	0/0:16,0:15:45.11:0,45,1263	1/1:22,0:22:45.13:514,45,0	0/0:3,0:2:2.37:0,2,8	0/1:25,0:22:49.88:50,0,54	0/0:5,0:5:12.03:0,12,224	1/1:13,0:12:30.96:304,31,0	1/1:11,0:11:15.96:135,16,0	0/0:12,0:11:30.07:0,30,591	0/0:7,0:6:15.03:0,15,393	0/0:6,0:4:12.02:0,12,188	1/1:2,6:8:4.51:84,5,0	0/1:10,0:10:11.82:102,0,12	1/1:11,0:8:3.70:25,4,0	0/0:27,0:25:66.13:0,66,2061	0/1:17,0:11:13.99:14,0,15	0/1:6,0:6:0.06:0,0,14	0/0:1,0:1:2.37:0,2,8	0/0:2,0:2:6.02:0,6,144	0/0:4,0:4:9.01:0,9,241	0/0:8,0:8:24.07:0,24,651	1/1:11,0:11:14.31:169,14,0	1/1:16,0:16:32.77:273,33,0	0/1:8,0:8:1.94:2,0,38	1/1:3,0:3:8.75:66,9,0
chr10	84564417	.	ATT	A	1670.82	PASS	AB=0.988;AC=27;AF=0.482;AN=56;BaseQRankSum=9.363;DP=322;FS=0.000;HRun=4;HaplotypeScore=70.1461;InbreedingCoeff=0.5093;MQ=51.24;MQ0=20;MQRankSum=-7.760;QD=10.13;ReadPosRankSum=2.751;VQSLOD=-0.1073;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:15:32.96:33,0,51	1/1:3,0:2:2.99:23,3,0	0/0:20,0:5:4.45:0,4,22	0/0:35,0:11:13.49:0,13,110	0/0:16,0:15:45.13:0,45,749	1/1:22,0:22:41.77:189,42,0	1/1:2,1:2:3.01:33,3,0	1/1:12,12:21:54.04:538,54,0	0/0:5,0:5:12.04:0,12,194	1/1:12,0:11:9.32:87,9,0	1/1:11,0:11:18.76:151,19,0	0/0:12,0:11:30.10:0,30,479	0/0:7,0:6:12.04:0,12,205	0/0:6,0:4:9.03:0,9,143	0/1:8,0:8:8.49:8,0,10	0/1:10,0:10:26.18:76,0,26	0/1:9,0:7:10.14:33,0,10	0/0:26,0:25:63.20:0,63,1108	1/1:14,3:11:27:260,27,0	1/1:2,4:6:15.03:161,15,0	1/1:0,1:1:3.01:33,3,0	0/0:2,0:2:6.02:0,6,99	0/0:3,0:3:9.03:0,9,142	0/0:8,0:8:24.08:0,24,411	1/1:11,0:11:6.98:46,7,0	0/0:16,0:16:10.34:0,10,102	1/1:3,5:8:18:184,18,0	0/1:4,0:4:10.51:12,0,11
chr10	84564419	.	T	TTA	1827.07	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=0.011;DP=331;FS=2.581;HRun=0;HaplotypeScore=74.8325;InbreedingCoeff=0.3403;MQ=50.51;MQ0=20;MQRankSum=-6.069;QD=11.71;ReadPosRankSum=-1.800;VQSLOD=2.9278;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:15:4.18:4,0,75	1/1:3,0:2:1.25:3,1,0	0/1:18,0:4:3.58:4,0,17	0/0:34,0:10:14.72:0,15,110	0/0:16,0:15:42.13:0,42,621	0/0:23,0:23:42.85:0,43,222	1/1:2,1:2:2.80:13,3,0	1/1:20,8:25:64.53:792,65,0	0/0:6,0:6:12.04:0,12,183	0/1:13,0:12:63.90:159,0,64	0/1:11,0:12:29.27:118,0,29	0/0:13,0:12:29.95:0,30,459	0/0:7,0:6:12.04:0,12,183	0/0:5,0:3:9.03:0,9,138	0/0:7,0:8:5.82:0,6,37	0/1:10,0:10:48.44:48,0,49	0/0:10,0:7:6.27:0,6,44	0/0:26,0:24:63.12:0,63,942	1/1:11,8:13:33.23:475,33,0	1/1:4,1:5:14.33:114,14,0	1/1:1,0:1:2.80:13,3,0	0/0:3,0:3:6.02:0,6,92	0/0:4,0:4:9.03:0,9,128	0/0:8,0:8:24.08:0,24,365	0/0:12,0:12:17.07:0,17,90	0/1:13,0:16:43.90:48,0,44	1/1:6,2:8:17.32:195,17,0	0/1:2,0:4:18.43:18,0,26
chr10	84564420	.	TTA	T	1866.52	PASS	AB=0.888;AC=33;AF=0.589;AN=56;BaseQRankSum=10.382;DP=330;FS=4.317;HRun=0;HaplotypeScore=70.1229;InbreedingCoeff=0.6145;MQ=50.37;MQ0=20;MQRankSum=-7.688;QD=9.02;ReadPosRankSum=0.255;VQSLOD=3.0304;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,1:16:14.86:197,15,0	1/1:0,3:2:3.01:43,3,0	1/1:18,0:4:0.28:16,0,0	0/0:34,0:10:5.83:0,6,54	0/0:15,0:14:39.09:0,39,544	1/1:23,0:23:15.40:54,15,0	1/1:3,0:2:2.88:15,3,0	0/1:28,0:25:60.07:143,0,60	0/0:6,0:6:14.96:0,15,152	1/1:8,5:12:35.24:355,35,0	1/1:4,7:12:32.84:374,33,0	0/0:13,0:12:32.40:0,32,310	0/0:7,0:6:14.96:0,15,189	0/0:5,0:3:9.02:0,9,99	1/1:8,0:8:4.43:29,4,0	0/1:6,4:10:10.03:194,0,10	1/1:3,5:6:11.99:128,12,0	0/0:26,0:24:63.09:0,63,908	0/1:18,1:13:0.13:59,0,0	1/1:5,0:5:11.44:61,11,0	1/1:1,0:1:2.88:15,3,0	0/0:4,0:4:5.99:0,6,79	0/0:5,0:5:8.99:0,9,103	0/0:8,0:8:24.07:0,24,332	1/1:12,0:12:8.53:38,9,0	1/1:12,0:14:31.79:191,32,0	1/1:8,0:8:14.73:65,15,0	1/1:3,0:4:10.22:83,10,0
chr10	84564421	.	TA	T	1218.71	PASS	AB=0.975;AC=23;AF=0.411;AN=56;BaseQRankSum=6.747;DP=325;FS=3.501;HRun=1;HaplotypeScore=66.6058;InbreedingCoeff=0.5607;MQ=50.35;MQ0=22;MQRankSum=-5.427;QD=6.96;ReadPosRankSum=-2.690;VQSLOD=-0.1514;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:25.58:197,26,0	1/1:3,0:2:3:25,3,0	1/1:17,0:4:6.87:24,7,0	0/0:33,0:9:3.58:0,4,49	0/0:15,0:13:39:0,39,442	0/1:23,0:23:2.17:12,0,2	0/0:3,0:2:1.25:0,1,3	0/1:27,1:25:53.95:54,0,161	0/0:6,0:6:14.97:0,15,150	1/1:14,0:13:34.16:278,34,0	1/1:10,2:12:32.82:281,33,0	0/0:13,0:12:32.41:0,32,326	0/0:7,0:6:14.96:0,15,159	0/0:5,0:3:9.02:0,9,97	0/1:8,0:8:0.32:8,0,0	0/1:9,1:10:15.40:123,0,15	1/1:9,0:6:11.96:97,12,0	0/0:25,0:23:63.08:0,63,716	0/0:19,0:13:16.64:0,17,125	0/0:6,0:5:7.67:0,8,32	0/0:1,0:1:1.25:0,1,3	0/0:4,0:4:5.98:0,6,73	0/0:5,0:5:8.98:0,9,96	0/0:8,0:8:24.07:0,24,293	1/1:12,0:12:7.28:46,7,0	1/1:13,0:12:31.18:182,31,0	0/1:8,0:8:1.48:1,0,27	1/1:4,0:4:10.23:76,10,0
chr10	84564675	.	A	AC	11388.99	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=14.830;DP=587;FS=0.343;HRun=2;HaplotypeScore=95.7981;InbreedingCoeff=0.9841;MQ=89.12;MQ0=0;MQRankSum=-2.911;QD=33.50;ReadPosRankSum=-0.528;VQSLOD=4.4557;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:34:63.21:907,63,0	1/1:0,3:3:5.88:86,6,0	0/0:20,0:20:57.16:0,57,684	0/0:24,0:24:57.12:0,57,674	0/0:20,0:20:51.16:0,51,629	1/1:1,23:24:54.18:777,54,0	1/1:1,21:22:63.21:907,63,0	1/1:5,37:42:99:1538,108,0	0/0:17,0:17:42.13:0,42,520	1/1:1,17:17:42.08:563,42,0	1/1:0,10:10:21.04:286,21,0	0/0:32,0:32:87.27:0,87,1078	0/0:30,0:30:78.21:0,78,950	0/0:19,0:19:54.17:0,54,669	0/0:19,0:19:51.16:0,51,632	1/1:0,19:19:54.18:778,54,0	1/1:3,20:23:60.20:864,60,0	0/0:17,0:17:48.15:0,48,592	1/1:2,17:19:51.10:671,51,0	1/1:0,11:11:27.09:388,27,0	1/1:3,33:36:69.23:994,69,0	0/0:17,0:17:48.10:0,48,548	0/0:10,0:10:30.09:0,30,371	0/0:22,0:22:57.18:0,57,707	1/1:2,11:13:27.09:389,27,0	1/1:0,19:19:54.14:736,54,0	1/1:2,31:33:75.25:1077,75,0	1/1:1,13:14:30.10:429,30,0
chr10	84567372	.	G	GTGTGTC	9692.68	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=10.340;DP=611;FS=5.338;HRun=0;HaplotypeScore=131.4367;InbreedingCoeff=0.7101;MQ=59.32;MQ0=6;MQRankSum=-0.942;QD=25.18;ReadPosRankSum=6.432;VQSLOD=4.0373;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:33:33.11:1138,33,0	1/1:10,0:10:24.08:348,24,0	0/0:24,0:13:23.02:0,23,300	0/0:18,0:13:24.02:0,24,348	0/0:19,0:19:45.05:0,45,859	1/1:23,0:22:39.13:570,39,0	1/1:20,0:20:30.10:438,30,0	0/1:33,0:32:42.75:509,0,43	0/0:21,0:21:56.69:0,57,1005	1/1:32,0:32:67.15:1063,67,0	1/1:17,0:17:13.77:377,14,0	0/0:27,0:27:72.03:0,72,1220	0/0:9,0:9:27.05:0,27,507	0/0:24,0:24:65.70:0,66,1123	0/0:21,0:21:56.79:0,57,1049	0/1:31,0:30:71.76:729,0,72	1/1:17,0:17:39.13:571,39,0	0/0:19,0:19:47.98:0,48,945	1/1:28,0:27:51.76:887,52,0	1/1:27,0:27:36.30:771,36,0	1/1:19,0:19:29.56:383,30,0	0/0:14,0:14:42.10:0,42,807	0/0:16,0:16:48.06:0,48,790	0/0:13,0:12:30.06:0,30,531	1/1:25,0:25:40.79:774,41,0	0/1:32,0:32:99:155,0,368	1/1:28,0:28:57.19:822,57,0	0/1:10,0:10:75.84:158,0,76
chr10	84567374	.	G	GTGTC	15940.64	PASS	AB=0.847;AC=29;AF=0.518;AN=56;BaseQRankSum=-12.729;DP=626;FS=6.787;HRun=0;HaplotypeScore=88.3768;InbreedingCoeff=0.7794;MQ=57.93;MQ0=6;MQRankSum=0.549;QD=39.75;ReadPosRankSum=5.330;VQSLOD=4.8103;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:11.18:582,11,0	1/1:1,8:10:24.08:643,24,0	0/0:24,0:12:32.76:0,33,312	0/0:17,0:12:24.02:0,24,319	0/0:19,0:19:45.09:0,45,738	1/1:0,22:24:39.13:1050,39,0	1/1:2,18:20:30.10:807,30,0	1/1:7,28:39:84.78:1198,85,0	0/0:21,0:21:53.69:0,54,846	1/1:0,31:32:87.10:1893,87,0	1/1:2,14:18:30.06:745,30,0	0/0:27,0:27:72.03:0,72,1054	0/0:10,0:10:27.05:0,27,421	0/0:24,0:24:62.60:0,63,953	0/0:21,0:21:56.80:0,57,894	0/1:5,27:31:46.07:1394,0,46	1/1:1,17:19:39.13:1051,39,0	0/0:19,0:19:47.99:0,48,793	1/1:4,23:28:75.02:1320,75,0	1/1:3,24:27:52.12:1465,52,0	1/1:2,17:20:30.05:690,30,0	0/0:14,0:14:42.09:0,42,674	0/0:16,0:16:48.06:0,48,691	0/0:13,0:12:30.06:0,30,458	1/1:2,24:28:38.24:1453,38,0	0/1:30,0:30:46.86:47,0,386	1/1:2,26:30:57.19:1523,57,0	0/1:10,0:10:75.85:79,0,76
chr10	84567376	.	G	GTC	6361.19	PASS	AB=0.983;AC=27;AF=0.482;AN=56;BaseQRankSum=13.603;DP=612;FS=4.525;HRun=0;HaplotypeScore=99.1775;InbreedingCoeff=0.7540;MQ=56.87;MQ0=6;MQRankSum=-0.653;QD=17.82;ReadPosRankSum=8.116;VQSLOD=3.8726;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:17.10:352,17,0	1/1:9,1:10:24.06:258,24,0	0/0:24,0:12:14.24:0,14,273	0/0:16,0:11:24.02:0,24,285	0/0:20,0:20:45.10:0,45,618	1/1:26,0:25:39.09:406,39,0	1/1:16,0:16:30.07:312,30,0	0/1:36,2:37:99:492,0,213	0/0:20,0:20:34.56:0,35,687	1/1:32,0:32:49.68:784,50,0	1/1:16,0:16:29.43:288,29,0	0/0:27,0:27:74.94:0,75,918	0/0:10,0:10:30.01:0,30,366	0/0:24,0:24:44.32:0,44,777	0/0:21,0:21:56.79:0,57,744	1/1:31,0:30:1.33:504,1,0	1/1:19,0:19:39.09:407,39,0	0/0:20,0:20:53.96:0,54,696	0/1:29,0:28:56.97:527,0,57	1/1:27,1:28:4.24:557,4,0	1/1:18,1:19:30.05:331,30,0	0/0:14,0:14:42.07:0,42,551	0/0:17,0:17:51.05:0,51,618	0/0:13,0:12:30.06:0,30,390	1/1:28,0:28:46.28:557,46,0	0/0:29,0:29:60.98:0,61,460	1/1:26,1:27:57.10:582,57,0	0/1:10,0:10:2.87:3,0,78
chr10	84567963	.	GGT	G	765.18	PASS	AB=0.912;AC=16;AF=0.308;AN=52;BaseQRankSum=3.256;DP=715;FS=5.919;HRun=0;HaplotypeScore=92.6204;InbreedingCoeff=-0.0842;MQ=60.67;MQ0=14;MQRankSum=0.773;QD=1.88;ReadPosRankSum=-1.178;VQSLOD=1.3819;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:38:3.45:3,0,310	0/0:10,0:10:12:0,12,139	./.	./.	0/1:25,0:24:28.20:28,0,89	1/1:15,1:16:18.03:185,18,0	0/1:20,5:27:99:141,0,231	0/1:35,0:34:15.89:16,0,130	0/0:12,0:12:12.04:0,12,177	0/0:16,0:20:14.11:0,14,129	0/0:8,0:11:11.96:0,12,94	0/1:26,3:29:76.19:76,0,318	0/0:18,0:18:18.95:0,19,270	0/1:23,3:27:83.54:84,0,297	0/1:20,2:23:3.78:4,0,326	0/0:12,0:24:21:0,21,183	0/0:20,0:44:42.02:0,42,410	0/1:26,4:31:37.47:37,0,425	0/1:26,0:27:2.12:2,0,81	0/0:14,0:14:9.03:0,9,132	0/1:61,1:62:83.46:83,0,273	0/1:23,1:25:58.39:58,0,148	0/0:11,0:11:3.01:0,3,45	0/0:40,0:43:12.43:0,12,723	1/1:15,4:18:12.03:131,12,0	0/0:13,0:17:31.46:0,31,244	0/1:15,2:18:69.69:70,0,134	0/0:8,0:11:9.01:0,9,88
chr10	84569626	.	AT	A	9770.57	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=12.873;DP=676;FS=0.644;HRun=8;HaplotypeScore=72.1964;InbreedingCoeff=0.9953;MQ=76.07;MQ0=0;MQRankSum=-2.888;QD=24.18;ReadPosRankSum=0.186;VQSLOD=5.4232;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,36:44:96.10:917,96,0	1/1:2,13:15:31.55:384,32,0	0/0:20,0:20:37.53:0,38,421	0/0:13,0:13:11.69:0,12,238	0/0:33,0:33:87.18:0,87,980	1/1:2,23:25:66.10:636,66,0	1/1:4,16:20:48.07:464,48,0	1/1:3,21:24:63.08:598,63,0	0/0:22,0:22:54.16:0,54,649	1/1:6,32:38:96.62:927,97,0	1/1:3,18:21:60.07:572,60,0	0/0:30,0:30:81.25:0,81,973	0/0:21,0:21:54.15:0,54,641	0/0:16,0:16:47.88:0,48,553	0/0:39,0:39:99:0,99,1196	1/1:3,26:29:44.88:711,45,0	1/1:3,31:34:90.08:857,90,0	0/0:16,0:16:45.11:0,45,520	1/1:1,15:16:45.03:418,45,0	1/1:4,13:17:39.06:377,39,0	1/1:2,28:30:75.12:724,75,0	0/0:17,0:17:45.14:0,45,544	0/0:21,0:21:57.17:0,57,689	0/0:24,0:24:60.14:0,60,708	1/1:1,16:17:48.08:463,48,0	1/1:7,19:26:63.08:604,63,0	1/1:11,21:32:69.07:655,69,0	1/1:0,16:16:48.08:463,48,0
chr10	84569706	.	A	AT	11935.41	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-13.293;DP=643;FS=3.616;HRun=7;HaplotypeScore=66.4404;InbreedingCoeff=0.9996;MQ=72.26;MQ0=0;MQRankSum=-0.238;QD=30.22;ReadPosRankSum=1.570;VQSLOD=5.4805;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,32:36:87.22:1035,87,0	1/1:5,11:16:33.06:382,33,0	0/0:10,0:10:27.02:0,27,254	0/0:17,0:17:36.02:0,36,338	0/0:34,0:34:96.14:0,96,921	1/1:4,20:24:72.20:847,72,0	1/1:1,14:15:33.10:399,33,0	1/1:3,19:23:59.95:688,60,0	0/0:22,0:22:54.07:0,54,521	1/1:4,20:24:66.19:779,66,0	1/1:4,27:31:52.23:897,52,0	0/0:31,0:31:84.11:0,84,798	0/0:16,0:16:39.06:0,39,376	0/0:23,0:23:63.03:0,63,592	0/0:25,0:25:69.07:0,69,649	1/1:9,19:28:40.23:749,40,0	1/1:4,23:27:69.21:833,69,0	0/0:11,0:11:27:0,27,247	1/1:5,10:15:36.11:432,36,0	1/1:3,32:35:70.29:1113,70,0	1/1:4,11:15:39.11:458,39,0	0/0:16,0:16:45.07:0,45,434	0/0:25,0:25:63.08:0,63,601	0/0:18,0:18:45.03:0,45,423	1/1:2,26:28:72.14:837,72,0	1/1:5,24:29:75.21:892,75,0	1/1:3,27:30:84.26:1014,84,0	1/1:3,16:19:48.15:580,48,0
chr10	84570627	.	CT	C	2813.39	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.962;DP=558;FS=4.704;HRun=3;HaplotypeScore=57.4644;InbreedingCoeff=0.9727;MQ=82.21;MQ0=0;MQRankSum=-2.380;QD=29.93;ReadPosRankSum=1.647;VQSLOD=3.2047;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1510	1/1:0,8:8:18.06:223,18,0	0/0:23,0:23:51.56:0,52,876	0/0:13,0:13:35.75:0,36,418	0/0:18,0:18:51.16:0,51,712	0/0:16,0:16:45.14:0,45,630	0/0:34,0:34:99:0,99,1385	0/0:24,0:24:57.17:0,57,781	0/0:20,0:20:54.14:0,54,739	1/1:1,17:18:51.14:608,51,0	1/1:0,10:10:21.07:260,21,0	0/0:23,0:23:69.23:0,69,993	0/0:15,0:15:45.13:0,45,626	0/0:24,0:24:69.22:0,69,974	0/0:20,0:20:60.20:0,60,862	1/1:0,24:24:72.23:893,72,0	1/1:4,30:34:81.25:1004,81,0	0/0:25,0:25:75.20:0,75,1042	0/0:9,0:9:27.07:0,27,370	0/0:9,0:9:27.08:0,27,370	0/0:32,0:32:96.29:0,96,1358	0/0:13,0:13:39.12:0,39,544	0/0:20,0:20:57.19:0,57,820	0/0:17,0:17:48.14:0,48,672	0/0:17,0:17:51.17:0,51,734	0/0:30,0:30:63.74:0,64,1210	0/0:22,0:22:66.22:0,66,950	0/0:3,0:3:6.02:0,6,86
chr10	84571424	.	G	GC	635.31	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.679;DP=431;FS=4.107;HRun=6;HaplotypeScore=64.6740;InbreedingCoeff=0.8620;MQ=75.17;MQ0=0;MQRankSum=1.641;QD=27.62;ReadPosRankSum=1.045;VQSLOD=4.3556;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:72.08:0,72,712	0/0:5,0:5:12.02:0,12,122	0/0:8,0:8:5.99:0,6,122	0/0:12,0:11:14.95:0,15,207	0/0:14,0:14:39.07:0,39,390	1/1:1,8:9:18.06:226,18,0	0/0:25,0:25:57.12:0,57,581	0/0:15,0:15:28.81:0,29,262	0/0:10,0:10:30.07:0,30,306	0/0:11,0:11:33.07:0,33,336	0/0:12,0:12:30.05:0,30,299	0/0:25,0:25:69.14:0,69,697	0/0:11,0:11:29.96:0,30,287	0/0:16,0:16:45.10:0,45,457	0/0:9,0:9:27.06:0,27,275	0/0:13,0:13:36.07:0,36,364	0/0:31,0:31:87.18:0,87,880	0/0:25,0:25:69.15:0,69,703	0/0:15,0:15:36.07:0,36,365	0/0:10,0:10:15.02:0,15,152	0/0:54,0:54:99:0,137,1374	0/0:6,0:6:9.01:0,9,92	0/0:3,0:3:9.02:0,9,92	0/0:14,0:14:42.10:0,42,428	1/1:0,14:14:42.13:528,42,0	0/0:15,0:15:39.06:0,39,388	0/0:12,0:12:30.06:0,30,306	0/0:7,0:7:21.04:0,21,213
chr10	84571562	.	AACGCAC	A	5898.68	PASS	AB=0.962;AC=25;AF=0.446;AN=56;BaseQRankSum=12.744;DP=484;FS=0.963;HRun=0;HaplotypeScore=106.9681;InbreedingCoeff=0.9213;MQ=66.87;MQ0=0;MQRankSum=-12.209;QD=26.10;ReadPosRankSum=-0.392;VQSLOD=4.5068;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,19:30:36.12:759,36,0	1/1:2,4:6:12.04:253,12,0	0/0:21,0:17:18.06:0,18,506	0/0:12,0:10:19.31:0,19,487	0/0:18,0:18:48.16:0,48,1539	0/0:12,0:12:21.07:0,21,682	1/1:7,11:18:24.08:506,24,0	1/1:8,8:16:24.01:402,24,0	0/0:14,0:14:30.09:0,30,913	1/1:5,13:18:36.12:751,36,0	1/1:3,9:12:21.07:443,21,0	0/0:18,0:18:36.11:0,36,1039	0/0:12,0:12:21.07:0,21,688	0/0:18,0:18:45.13:0,45,1278	0/0:18,0:18:42.14:0,42,1377	1/1:1,7:8:15.05:316,15,0	1/1:9,16:25:33.11:696,33,0	0/0:34,0:34:66.21:0,66,2109	1/1:9,9:18:23.81:337,24,0	1/1:3,8:11:24.05:464,24,0	1/1:8,9:17:8.99:146,9,0	0/0:20,0:20:45.60:0,46,1309	0/0:11,0:11:30.09:0,30,917	0/0:29,0:28:66.20:0,66,1998	0/0:14,0:13:36.10:0,36,1112	0/1:24,1:25:5.99:6,0,1724	1/1:4,18:22:37.94:820,38,0	0/0:7,0:7:18.06:0,18,592
chr10	84572588	.	G	GTATGT	8920.67	PASS	AC=22;AF=0.407;AN=54;BaseQRankSum=-7.252;DP=223;FS=0.000;HRun=0;HaplotypeScore=38.8206;InbreedingCoeff=0.8144;MQ=65.75;MQ0=0;MQRankSum=-6.518;QD=74.34;ReadPosRankSum=-0.408;VQSLOD=5.1739;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:21.07:0,21,434	0/0:1,0:1:3.01:0,3,64	0/0:7,0:5:11.75:0,12,199	0/0:4,0:4:3.75:0,4,65	0/0:4,0:4:12.04:0,12,256	1/1:6,10:16:39.13:1102,39,0	1/1:2,0:2:3.01:93,3,0	1/1:18,20:40:99:2958,111,0	0/0:4,0:4:12.04:0,12,242	0/0:5,0:5:12.04:0,12,256	0/0:7,0:7:15.05:0,15,320	0/0:5,0:5:15.05:0,15,320	0/0:7,0:7:21.07:0,21,448	0/0:5,0:5:15.05:0,15,320	1/1:1,2:4:6.02:188,6,0	0/0:4,0:4:12.04:0,12,256	0/0:23,0:22:66.23:0,66,1389	0/0:18,0:18:54.19:0,54,1112	1/1:0,5:7:21.05:521,21,0	1/1:0,4:4:12.04:371,12,0	1/1:0,4:4:12.04:376,12,0	0/0:1,0:1:3.01:0,3,38	0/0:1,0:1:3.01:0,3,64	./.	1/1:2,12:14:42.14:1251,42,0	1/1:0,4:4:12.04:375,12,0	1/1:0,6:6:15.05:465,15,0	1/1:1,17:18:39.13:1221,39,0
chr10	84572685	.	G	GTGTGTCCT	4051.58	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-1.875;DP=375;FS=1.763;HRun=0;HaplotypeScore=91.4854;InbreedingCoeff=0.8614;MQ=64.51;MQ0=0;MQRankSum=-8.495;QD=54.02;ReadPosRankSum=-0.923;VQSLOD=3.3733;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:16:45.15:0,45,1189	1/1:0,3:4:9.03:385,9,0	0/0:7,0:7:18.04:0,18,403	0/0:9,0:9:21.07:0,21,563	0/0:11,0:11:26.37:0,26,727	0/0:17,0:17:45.15:0,45,1138	0/0:16,0:16:48.16:0,48,1293	0/0:27,0:27:69.23:0,69,1802	0/0:6,0:6:18.06:0,18,486	1/1:7,2:11:18.04:549,18,0	1/1:4,6:10:15.05:642,15,0	0/0:14,0:14:39.12:0,39,996	0/0:8,0:8:24.08:0,24,648	0/0:13,0:13:36.11:0,36,915	0/0:12,0:12:27.09:0,27,721	1/1:7,7:13:30.10:1143,30,0	1/1:10,8:18:30.10:1258,30,0	0/0:17,0:17:51.18:0,51,1357	0/0:14,0:14:42.12:0,42,1030	0/0:16,0:16:48.16:0,48,1275	0/0:19,0:19:54.17:0,54,1388	0/0:12,0:12:33.11:0,33,891	0/0:7,0:7:21.07:0,21,565	0/0:16,0:16:45.11:0,45,1153	0/0:10,0:10:27.09:0,27,677	0/1:18,0:18:74.67:75,0,1170	0/0:22,0:22:66.23:0,66,1731	0/0:11,0:11:33.11:0,33,862
chr10	84572846	.	CGTGTGTGTGTGTGTGTGTGTGTGT	C	1313.83	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=4.140;DP=518;FS=1.278;HRun=0;HaplotypeScore=277.2707;InbreedingCoeff=0.7245;MQ=70.24;MQ0=3;MQRankSum=-0.967;QD=13.41;ReadPosRankSum=-0.310;VQSLOD=2.0684;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:45.15:0,45,2161	0/0:4,0:4:0:0,0,0	0/0:32,0:21:6.02:0,6,165	0/0:26,0:23:3.01:0,3,61	0/0:11,0:12:18.06:0,18,1555	0/0:12,0:17:21.07:0,21,1085	1/1:22,7:28:6.02:376,6,0	./.	0/0:15,0:15:21.07:0,21,1444	0/0:14,0:14:21.06:0,21,1313	0/0:8,0:8:15.05:0,15,1255	0/0:23,0:24:42.62:0,43,3504	0/0:7,0:8:12.04:0,12,1144	0/0:15,0:15:24.08:0,24,1872	0/0:15,0:18:18.06:0,18,1295	0/0:21,0:21:36.12:0,36,2788	0/0:29,0:31:42.14:0,42,3929	0/0:23,0:23:48.12:0,48,3097	1/1:14,3:17:1.52:56,2,0	./.	1/1:38,0:37:12.04:264,12,0	0/0:5,0:6:9.03:0,9,857	0/0:3,0:3:6.02:0,6,271	0/0:39,0:39:66.23:0,66,5826	0/0:13,0:15:18.06:0,18,958	0/0:12,0:12:21.07:0,21,1118	1/1:9,5:13:12.04:751,12,0	0/0:9,0:11:18.03:0,18,933
chr10	84573276	.	TGG	T	1267.93	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=5.633;DP=405;FS=28.112;HRun=12;HaplotypeScore=73.4020;InbreedingCoeff=0.5294;MQ=79.22;MQ0=1;MQRankSum=-0.764;QD=8.57;ReadPosRankSum=7.216;VQSLOD=-0.2294;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:19:19.14:0,19,139	0/0:5,0:6:5.98:0,6,46	0/0:24,0:20:26.54:0,27,203	0/0:20,0:10:3.68:0,4,63	0/0:7,0:8:11.50:0,12,105	1/1:0,11:11:24.02:244,24,0	0/0:19,0:19:1.78:0,2,16	1/1:18,0:18:1.72:11,2,0	0/0:11,0:11:15.46:0,15,128	1/1:14,0:14:2.47:15,2,0	0/0:5,0:5:2.98:0,3,22	0/0:19,0:20:32.92:0,33,276	0/0:6,0:7:8.28:0,8,74	0/0:7,0:7:3:0,3,26	1/1:5,21:27:44.56:434,45,0	0/0:13,0:13:18:0,18,158	0/0:34,0:35:45.30:0,45,364	0/0:15,0:15:6.67:0,7,269	0/0:12,0:12:0.92:0,1,3	1/1:4,0:4:2.68:13,3,0	0/1:23,0:22:13.78:14,0,23	0/0:11,0:12:9.88:0,10,78	0/0:1,0:1:3:0,3,26	0/0:23,0:23:29.98:0,30,287	1/1:7,8:15:20.88:213,21,0	1/1:8,12:20:41.89:403,42,0	0/1:13,0:13:32.90:33,0,37	1/1:1,2:3:5.98:61,6,0
chr10	84573277	.	G	GT	2196.28	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=-0.415;DP=376;FS=32.765;HRun=1;HaplotypeScore=82.0372;InbreedingCoeff=0.7333;MQ=80.89;MQ0=1;MQRankSum=-2.890;QD=10.61;ReadPosRankSum=4.909;VQSLOD=-0.1337;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:26.99:0,27,219	1/1:4,0:4:5.23:23,5,0	0/0:24,0:20:43.51:0,44,380	0/0:21,0:10:23.64:0,24,176	0/0:8,0:8:8.90:0,9,97	1/1:11,0:11:25.92:139,26,0	1/1:19,0:19:26.58:198,27,0	1/1:17,0:17:44.38:375,44,0	0/0:11,0:11:15:0,15,129	1/1:2,7:9:9.19:111,9,0	0/0:1,3:4:2.99:0,3,24	0/0:18,0:18:18.44:0,18,156	0/0:10,0:10:11.95:0,12,97	0/0:8,0:8:5.69:0,6,51	1/1:27,0:27:34.39:295,34,0	0/1:12,0:12:39.88:75,0,40	0/1:29,0:29:99:152,0,128	0/0:15,0:15:21.67:0,22,238	1/1:8,1:9:20.04:154,20,0	1/1:4,0:4:11.84:81,12,0	1/1:20,0:19:13.45:126,13,0	0/0:11,0:11:15.81:0,16,130	0/0:1,0:1:0:0,0,0	0/0:21,0:21:32.97:0,33,306	1/1:14,0:14:19.68:162,20,0	1/1:18,0:18:43.38:243,43,0	1/1:10,1:11:31.06:222,31,0	1/1:3,0:3:8.63:50,9,0
chr10	84573287	.	GGT	G	1208.85	PASS	AB=0.988;AC=17;AF=0.304;AN=56;BaseQRankSum=8.678;DP=380;FS=31.825;HRun=0;HaplotypeScore=64.4095;InbreedingCoeff=0.6307;MQ=74.92;MQ0=1;MQRankSum=1.343;QD=8.11;ReadPosRankSum=6.264;VQSLOD=1.2539;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:56.82:0,57,545	0/0:2,0:2:6.02:0,6,69	0/0:17,0:12:24.21:0,24,248	0/0:19,0:10:2.16:0,2,126	0/0:13,0:13:20.78:0,21,189	0/1:12,0:12:1.43:35,0,1	1/1:16,0:16:14.83:99,15,0	1/1:13,1:14:37.11:298,37,0	0/0:14,0:14:29.99:0,30,302	0/0:4,0:4:8.65:0,9,58	0/0:3,0:3:6:0,6,69	0/0:20,0:20:43.33:0,43,513	0/0:12,0:12:29.72:0,30,305	0/0:6,0:6:12:0,12,113	0/1:26,1:27:51.94:82,0,52	0/0:13,0:13:27.03:0,27,304	0/0:28,0:28:52.42:0,52,631	0/0:14,0:14:27.88:0,28,385	1/1:9,0:9:16.92:155,17,0	1/1:2,1:3:3.01:39,3,0	1/1:24,2:25:7.81:131,8,0	0/0:12,0:12:23.79:0,24,236	0/0:1,0:1:3.01:0,3,39	0/0:19,0:19:45.01:0,45,501	1/1:10,0:10:1.99:61,2,0	0/1:16,0:16:0.80:96,0,1	1/1:14,2:16:43.53:393,44,0	0/0:8,0:8:5.55:0,6,112
chr10	84573288	.	GT	G	982.84	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=3.172;DP=368;FS=19.095;HRun=1;HaplotypeScore=57.6159;InbreedingCoeff=0.8179;MQ=75.79;MQ0=1;MQRankSum=1.670;QD=12.29;ReadPosRankSum=-0.173;VQSLOD=0.6416;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:56.06:0,56,498	0/0:2,0:2:5.87:0,6,40	0/0:16,0:11:5.44:0,5,208	0/0:20,0:10:16.52:0,17,187	0/0:12,0:12:21.70:0,22,169	0/0:13,0:13:28.64:0,29,166	1/1:2,11:15:14.87:121,15,0	1/1:1,12:14:37.07:294,37,0	0/0:13,0:13:29.56:0,30,269	0/0:3,0:3:8.98:0,9,79	0/0:4,0:4:6:0,6,62	0/0:18,1:19:18.47:0,18,351	0/0:12,0:12:29.72:0,30,279	0/0:6,0:6:11.98:0,12,99	0/0:27,0:27:39.37:0,39,282	0/0:12,0:12:20.81:0,21,235	0/0:23,1:24:33.16:0,33,477	0/0:13,1:14:14.22:0,14,273	1/1:0,8:8:17:189,17,0	1/1:3,0:3:2.92:17,3,0	1/1:4,20:23:7.92:114,8,0	0/0:12,0:12:23.67:0,24,203	0/0:1,0:1:3:0,3,25	0/0:19,0:19:47.93:0,48,420	0/0:10,0:10:14.91:0,15,92	0/0:16,0:16:29.38:0,29,218	1/1:10,5:16:47.48:419,47,0	0/0:8,0:8:23.37:0,23,157
chr10	84623662	.	T	TCAA	682.68	PASS	AB=0.727;AC=11;AF=0.196;AN=56;BaseQRankSum=5.713;DP=422;FS=11.481;HRun=0;HaplotypeScore=94.6361;InbreedingCoeff=0.8339;MQ=78.01;MQ0=4;MQRankSum=-2.365;QD=12.41;ReadPosRankSum=1.347;VQSLOD=2.5110;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,10:19:14.23:234,14,0	1/1:1,2:3:6.02:101,6,0	0/0:33,0:20:42.77:0,43,632	0/0:18,0:15:30.61:0,31,344	0/0:23,0:23:69.17:0,69,1181	0/0:13,0:13:32.63:0,33,344	0/0:15,0:15:45.15:0,45,790	0/0:33,0:33:94.53:0,95,1558	0/0:21,0:20:57.15:0,57,1006	1/1:5,1:8:13.46:123,13,0	1/1:8,2:15:20.52:326,21,0	0/0:10,0:10:30.02:0,30,484	0/0:12,0:12:30.07:0,30,509	0/0:9,0:9:27.09:0,27,447	0/0:24,0:24:62.70:0,63,1044	1/1:2,0:2:0.96:30,1,0	0/1:5,0:8:2.32:28,0,2	0/0:16,0:16:42.04:0,42,731	0/0:11,0:11:30.10:0,30,509	0/0:19,0:19:48.16:0,48,870	0/0:7,0:7:15.01:0,15,241	0/0:20,0:20:57.16:0,57,964	0/0:11,0:11:33.09:0,33,550	0/0:13,0:13:30.57:0,31,545	0/0:13,0:13:26.94:0,27,258	0/0:15,0:13:22.94:0,23,264	0/0:23,0:23:63.22:0,63,1134	0/0:8,0:8:14.98:0,15,155
chr10	84623663	.	T	TA	399.18	PASS	AB=0.800;AC=19;AF=0.339;AN=56;BaseQRankSum=9.070;DP=426;FS=1.939;HRun=0;HaplotypeScore=76.7787;InbreedingCoeff=0.7654;MQ=76.88;MQ0=4;MQRankSum=-2.526;QD=3.66;ReadPosRankSum=0.838;VQSLOD=2.8979;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:10.53:68,11,0	1/1:3,0:3:8.50:42,8,0	0/0:33,0:20:49.02:0,49,449	0/0:18,0:14:9.85:0,10,205	0/0:23,0:23:69.10:0,69,855	0/1:9,2:12:15.15:85,0,15	0/0:15,0:15:44.67:0,45,535	0/0:33,0:33:86.50:0,86,863	0/0:21,0:20:57.01:0,57,737	1/1:9,0:9:8.27:49,8,0	1/1:15,0:15:19.21:106,19,0	0/0:9,0:9:27.05:0,27,353	0/0:11,0:11:33.05:0,33,415	0/0:9,0:9:26.98:0,27,306	0/0:24,0:24:65.96:0,66,802	1/1:2,0:2:1.64:11,2,0	1/1:8,0:8:1.39:9,1,0	0/0:16,0:16:44.81:0,45,582	0/0:11,0:11:18.81:0,19,255	0/0:19,0:19:47.44:0,47,434	0/0:7,0:7:14.95:0,15,142	0/0:21,0:21:57.06:0,57,701	0/0:11,0:11:30.04:0,30,361	0/0:13,0:13:29.88:0,30,397	1/1:5,10:15:11.34:116,11,0	1/1:16,0:15:13.98:90,14,0	0/0:23,0:23:56.51:0,57,519	1/1:2,0:9:0.39:8,0,0
chr10	84623664	.	T	TA	1937.48	PASS	AB=0.689;AC=28;AF=0.500;AN=56;BaseQRankSum=2.193;DP=445;FS=7.713;HRun=14;HaplotypeScore=78.9002;InbreedingCoeff=0.6648;MQ=75.57;MQ0=4;MQRankSum=-2.948;QD=8.54;ReadPosRankSum=-2.599;VQSLOD=1.9424;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:20.31:121,20,0	1/1:3,0:3:8.61:46,9,0	0/0:33,0:20:16.36:0,16,103	0/0:18,0:14:3.49:0,3,28	0/0:21,0:23:38.42:0,38,227	1/1:12,0:12:0.35:104,0,0	0/0:12,1:16:6.01:0,6,141	0/1:15,18:33:0.93:338,0,1	0/0:20,0:20:15.73:0,16,179	1/1:11,0:11:15.60:84,16,0	1/1:16,0:16:25.80:140,26,0	0/0:9,0:9:20.60:0,21,131	0/0:14,0:14:23.41:0,23,149	0/0:9,0:9:20.43:0,20,126	0/0:20,0:24:35.05:0,35,291	1/1:2,0:2:2.90:16,3,0	1/1:10,0:10:13.89:64,14,0	0/0:16,0:16:40.96:0,41,263	1/1:6,6:12:17.98:152,18,0	0/1:8,13:21:2.51:228,0,3	0/1:2,4:7:5.16:45,0,5	0/0:20,0:20:44.18:0,44,281	0/1:9,1:10:8.60:9,0,78	0/0:10,0:13:29.29:0,29,188	1/1:15,0:15:15:132,15,0	1/1:11,0:21:43.05:230,43,0	1/1:11,11:23:47.81:401,48,0	1/1:9,0:9:5.68:29,6,0
chr10	84624075	.	C	CAAAAAAA	6197.01	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=10.329;DP=615;FS=15.703;HRun=5;HaplotypeScore=182.8716;InbreedingCoeff=0.5468;MQ=67.20;MQ0=3;MQRankSum=-9.955;QD=26.15;ReadPosRankSum=-0.868;VQSLOD=0.3876;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:55:87.28:655,87,0	1/1:0,6:7:15.05:549,15,0	0/0:32,0:28:52.36:0,52,1231	0/0:41,0:36:71.77:0,72,1609	0/0:29,0:29:75.21:0,75,1613	0/1:16,0:16:99:111,0,116	0/1:28,0:27:26.49:26,0,262	0/0:22,0:19:21.01:0,21,901	0/0:30,0:30:87.29:0,87,1947	1/1:6,15:24:48.13:1458,48,0	1/1:8,10:21:46.35:1098,46,0	0/0:21,0:21:57.18:0,57,1244	0/0:25,0:25:53.95:0,54,1192	0/0:19,0:19:51.14:0,51,1047	0/0:32,0:32:93.31:0,93,2044	1/1:8,5:15:33.11:981,33,0	1/1:7,8:16:30.06:1034,30,0	0/0:17,0:16:41.67:0,42,846	0/0:13,0:13:35.49:0,35,731	0/0:11,0:11:2.63:0,3,48	0/0:11,0:11:8.76:0,9,186	0/0:18,0:18:51.15:0,51,1067	0/0:19,0:19:54.17:0,54,1219	0/0:35,0:35:99:0,99,2106	0/1:17,0:17:1.55:2,0,219	0/1:18,0:18:99:213,0,401	0/1:18,0:18:69.87:70,0,473	0/0:1,0:1:3.01:0,3,60
chr10	84624295	.	T	TA	4198.86	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-1.888;DP=543;FS=4.180;HRun=5;HaplotypeScore=58.3032;InbreedingCoeff=0.9971;MQ=68.28;MQ0=1;MQRankSum=-0.589;QD=32.05;ReadPosRankSum=1.646;VQSLOD=4.4206;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:69.94:1153,70,0	1/1:1,9:10:21.07:276,21,0	0/0:13,0:11:33.04:0,33,330	0/0:16,0:14:28.49:0,28,315	0/0:23,0:23:66.15:0,66,701	0/0:14,0:14:36.02:0,36,364	0/0:15,0:15:42.09:0,42,443	0/0:33,0:33:96.21:0,96,1011	0/0:18,0:18:51.13:0,51,548	1/1:3,27:30:81.23:1035,81,0	1/1:3,12:15:30.10:392,30,0	0/0:15,0:15:45.11:0,45,483	0/0:23,0:23:66.16:0,66,709	0/0:25,0:25:66.12:0,66,683	0/0:22,0:22:66.13:0,66,692	1/1:2,19:21:51.17:671,51,0	1/1:2,20:22:51.17:671,51,0	0/0:23,0:22:63.14:0,63,669	0/0:19,0:19:42.05:0,42,437	0/0:18,0:18:48.10:0,48,507	0/0:17,0:17:45.11:0,45,477	0/0:10,0:10:21.05:0,21,226	0/0:23,0:22:63.05:0,63,653	0/0:12,0:12:33.08:0,33,355	0/0:22,0:22:60.15:0,60,644	0/0:22,0:22:57.14:0,57,612	0/0:22,0:21:57.09:0,57,585	0/0:7,0:7:21.05:0,21,226
chr10	84624636	.	GACTA	G	769.45	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.279;DP=521;FS=0.966;HRun=0;HaplotypeScore=94.7472;InbreedingCoeff=0.9796;MQ=74.16;MQ0=0;MQRankSum=-4.435;QD=40.50;ReadPosRankSum=0.056;VQSLOD=3.6271;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:48.16:864,48,0	0/0:7,0:7:21.07:0,21,554	0/0:10,0:10:18.06:0,18,423	0/0:17,0:17:19.25:0,19,884	0/0:28,0:28:81.28:0,81,2100	0/0:24,0:24:72.21:0,72,1755	0/0:13,0:13:36.12:0,36,950	0/0:32,0:32:69.24:0,69,1798	0/0:26,0:26:75.26:0,75,1960	0/0:24,0:24:66.23:0,66,1730	0/0:27,0:27:81.26:0,81,2053	0/0:18,0:18:45.15:0,45,1168	0/0:14,0:14:42.14:0,42,1107	0/0:16,0:16:45.15:0,45,1156	0/0:22,0:22:63.22:0,63,1640	0/0:17,0:17:51.18:0,51,1329	0/0:18,0:18:54.19:0,54,1420	0/0:16,0:16:39.13:0,39,980	0/0:19,0:19:54.19:0,54,1396	0/0:30,0:30:84.27:0,84,2110	0/0:9,0:9:27.09:0,27,713	0/0:9,0:9:27.09:0,27,713	0/0:17,0:17:51.18:0,51,1302	0/0:13,0:12:39.13:0,39,994	0/0:14,0:14:39.11:0,39,964	0/0:25,0:25:66.23:0,66,1702	0/0:23,0:22:60.21:0,60,1582	0/0:14,0:14:33.11:0,33,826
chr10	84625259	.	T	TTC	225.42	PASS	AB=0.925;AC=9;AF=0.161;AN=56;BaseQRankSum=4.301;DP=433;FS=31.901;HRun=0;HaplotypeScore=90.1710;InbreedingCoeff=0.5428;MQ=48.48;MQ0=48;MQRankSum=-0.153;QD=2.50;ReadPosRankSum=2.763;VQSLOD=-0.1464;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,9:27:14.04:14,0,87	0/1:5,0:5:3.83:4,0,16	0/0:25,0:9:20.80:0,21,171	0/0:24,0:5:5.14:0,5,73	0/0:18,0:16:22.14:0,22,146	0/0:8,0:8:19.10:0,19,117	0/0:6,0:5:14.76:0,15,109	0/0:26,0:24:50.74:0,51,401	0/0:11,0:10:18.38:0,18,125	1/1:17,0:15:19.63:176,20,0	1/1:9,0:8:15.50:87,15,0	0/0:10,0:9:21.18:0,21,129	0/0:13,0:12:27.18:0,27,208	0/0:12,0:11:13.14:0,13,127	0/0:15,0:14:22.67:0,23,164	1/1:10,0:8:12.20:77,12,0	0/1:18,0:14:16.88:17,0,40	0/0:17,0:15:21.73:0,22,192	0/0:19,0:15:33.11:0,33,251	0/0:17,0:16:31.18:0,31,182	0/0:8,0:7:10.29:0,10,57	0/0:6,0:5:12.04:0,12,75	0/0:20,0:17:21.06:0,21,132	0/0:9,0:9:6.16:0,6,70	0/0:10,0:7:8.88:0,9,65	0/0:33,0:28:52.61:0,53,389	0/0:25,0:24:53.47:0,53,360	0/0:11,0:7:17.22:0,17,138
chr10	84625623	.	A	ATTTTTT	1211.26	PASS	AB=0.800;AC=3;AF=0.056;AN=54;BaseQRankSum=1.566;DP=400;FS=0.000;HRun=2;HaplotypeScore=74.8268;InbreedingCoeff=0.2822;MQ=84.64;MQ0=34;MQRankSum=-3.698;QD=71.25;ReadPosRankSum=3.416;VQSLOD=2.1683;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:42.14:0,42,901	./.	0/0:98,0:28:62.34:0,62,1166	0/0:165,0:46:99:0,106,1910	0/0:10,0:10:21.07:0,21,468	0/0:6,0:6:15.05:0,15,338	0/0:4,0:4:9.03:0,9,160	0/0:8,0:8:21.07:0,21,435	0/0:3,0:3:9.03:0,9,200	0/0:2,0:2:6.02:0,6,130	0/0:3,0:3:2.96:0,3,66	0/0:4,0:4:6.02:0,6,136	0/0:2,0:2:6.02:0,6,135	0/0:1,0:1:3.01:0,3,68	0/0:4,0:4:9.03:0,9,203	0/0:5,0:5:15.04:0,15,296	0/0:10,0:10:27.07:0,27,518	0/0:6,0:6:18.06:0,18,405	0/0:3,0:3:9.03:0,9,203	0/0:5,0:5:15.03:0,15,260	0/0:3,0:3:6.02:0,6,133	0/0:4,0:4:12.04:0,12,270	0/0:1,0:1:3.01:0,3,67	0/0:6,0:6:15.05:0,15,335	0/0:5,0:5:15.05:0,15,318	0/1:9,3:12:31.65:882,0,32	0/0:8,0:8:21.07:0,21,467	1/1:4,1:5:15.05:430,15,0
chr10	84625726	.	A	AGGGGGGGG	2928.56	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.285;DP=336;FS=25.848;HRun=6;HaplotypeScore=99.4423;InbreedingCoeff=0.9345;MQ=91.52;MQ0=5;MQRankSum=-7.687;QD=68.11;ReadPosRankSum=-0.851;VQSLOD=0.0035;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:12.95:328,13,0	1/1:1,0:1:3.01:138,3,0	0/0:32,0:21:43.87:0,44,769	0/0:35,0:20:42.38:0,42,614	0/0:12,0:12:30.05:0,30,569	0/0:17,0:17:48.13:0,48,1153	0/0:13,0:13:36.11:0,36,943	0/0:16,0:16:45.10:0,45,1023	0/0:6,0:6:18.06:0,18,521	1/1:5,4:9:26.41:814,26,0	1/1:4,3:7:17.56:528,18,0	0/0:8,0:8:24.07:0,24,611	0/0:5,0:5:15.04:0,15,372	0/0:10,0:10:30.08:0,30,744	0/0:12,0:12:36.10:0,36,977	1/1:2,5:7:21.06:743,21,0	1/1:5,3:8:21:556,21,0	0/0:12,0:12:36.11:0,36,940	0/0:12,0:12:33.09:0,33,830	0/0:7,0:7:21.07:0,21,571	0/0:11,0:11:33.11:0,33,948	0/0:6,0:6:18.06:0,18,521	0/0:12,0:12:33.10:0,33,892	0/0:8,0:8:24.07:0,24,634	0/0:12,0:12:36.11:0,36,958	0/0:25,0:25:75.22:0,75,1836	0/0:18,0:18:53.20:0,53,1419	0/0:3,0:3:9.02:0,9,199
chr10	84625743	.	T	TTC	1203.01	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.393;DP=394;FS=9.737;HRun=0;HaplotypeScore=76.3360;InbreedingCoeff=0.9337;MQ=94.04;MQ0=0;MQRankSum=-4.835;QD=26.15;ReadPosRankSum=0.754;VQSLOD=4.4425;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:24.12:80,24,0	0/0:4,0:4:9.03:0,9,116	0/0:28,0:26:47.93:0,48,606	0/0:35,0:26:40.74:0,41,601	0/0:12,0:12:33.11:0,33,424	1/1:0,14:14:39.13:658,39,0	0/0:12,0:12:27.09:0,27,347	0/0:21,0:21:45.13:0,45,556	0/0:7,0:7:18.06:0,18,232	0/0:12,0:12:30.05:0,30,367	0/0:10,0:10:24.08:0,24,308	0/0:13,0:13:39.11:0,39,487	0/0:10,0:10:24.06:0,24,295	0/0:9,0:9:21.07:0,21,270	0/0:16,0:16:42.09:0,42,522	0/0:9,0:9:21.07:0,21,270	0/0:15,0:15:39.11:0,39,486	0/0:14,0:14:36.12:0,36,463	0/0:12,0:12:24.04:0,24,269	0/0:7,0:7:21.07:0,21,270	0/0:19,0:19:57.18:0,57,721	0/0:8,0:8:24.08:0,24,309	0/0:14,0:14:39.06:0,39,455	0/0:14,0:14:39.12:0,39,489	1/1:1,12:13:36.12:607,36,0	0/0:27,0:27:66.21:0,66,849	0/0:17,0:17:48.16:0,48,618	0/0:3,0:3:6.02:0,6,77
chr10	84625752	.	T	TCGATCTCA	1055.24	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.093;DP=409;FS=0.000;HRun=0;HaplotypeScore=125.5005;InbreedingCoeff=0.8159;MQ=93.90;MQ0=0;MQRankSum=-4.146;QD=39.08;ReadPosRankSum=0.137;VQSLOD=3.3655;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,13:27:27.09:1149,27,0	0/0:4,0:4:12.04:0,12,309	0/0:30,0:29:47.80:0,48,1001	0/0:26,0:21:8.36:0,8,951	0/0:11,0:11:33.07:0,33,825	0/0:15,0:15:45.13:0,45,677	0/0:12,0:12:30.09:0,30,736	0/0:20,0:20:54.16:0,54,1210	0/0:8,0:8:21.06:0,21,508	0/0:11,0:11:30:0,30,741	0/0:11,0:11:27.09:0,27,694	0/0:14,0:14:39.12:0,39,981	0/0:11,0:11:33.03:0,33,704	0/0:9,0:9:27.09:0,27,705	0/0:15,0:15:36.12:0,36,924	0/0:9,0:9:21.07:0,21,521	0/0:18,0:18:48.13:0,48,1123	0/0:13,0:13:36.11:0,36,868	0/0:11,0:11:21.06:0,21,482	0/0:8,0:8:24.07:0,24,587	0/0:24,0:24:66.14:0,66,1486	0/0:9,0:9:24.08:0,24,643	0/0:16,0:16:42.13:0,42,1061	0/0:16,0:16:45.10:0,45,1036	0/0:17,0:17:48.10:0,48,668	0/0:24,0:24:66.19:0,66,1659	0/0:18,0:18:54.14:0,54,1279	0/0:2,0:2:6.02:0,6,161
chr10	84626010	.	T	TGTCTATTGCA	5345.19	PASS	AB=0.700;AC=11;AF=0.196;AN=56;BaseQRankSum=1.888;DP=524;FS=8.082;HRun=0;HaplotypeScore=156.5427;InbreedingCoeff=0.8735;MQ=91.25;MQ0=0;MQRankSum=-10.041;QD=83.52;ReadPosRankSum=-0.286;VQSLOD=4.5808;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,9:23:45.07:1730,45,0	1/1:0,4:5:15.05:773,15,0	0/0:23,0:23:44.09:0,44,1688	0/0:25,0:25:69.24:0,69,1924	0/0:19,0:19:54.19:0,54,1748	0/0:24,0:24:66.23:0,66,2125	0/0:26,0:26:66.16:0,66,1813	0/0:31,0:31:93.28:0,93,2724	0/0:22,0:22:63.22:0,63,2013	1/1:3,5:9:24.08:1049,24,0	1/1:7,2:10:18.06:376,18,0	0/0:25,0:25:69.24:0,69,2152	0/0:27,0:27:75.26:0,75,2380	0/0:25,0:25:69.24:0,69,2211	0/0:22,0:22:66.21:0,66,2012	0/1:4,2:7:85.14:321,0,85	1/1:5,5:10:21.07:1096,21,0	0/0:15,0:15:39.13:0,39,1262	0/0:13,0:13:39.13:0,39,1231	0/0:11,0:11:30.10:0,30,971	0/0:24,0:24:69.21:0,69,1989	0/0:17,0:17:45.15:0,45,1403	0/0:18,0:18:51.12:0,51,1480	0/0:32,0:32:96.33:0,96,2997	0/0:11,0:11:33.11:0,33,1018	0/0:27,0:27:75.22:0,75,2287	0/0:16,0:16:45.15:0,45,1457	0/0:7,0:7:12.04:0,12,386
chr10	84626126	.	G	GAC	711.87	PASS	AB=0.938;AC=9;AF=0.167;AN=54;BaseQRankSum=7.319;DP=642;FS=11.717;HRun=0;HaplotypeScore=108.3329;InbreedingCoeff=0.7801;MQ=60.15;MQ0=5;MQRankSum=-3.866;QD=11.12;ReadPosRankSum=-0.703;VQSLOD=2.6861;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,2:23:3.01:52,3,0	1/1:7,0:7:8.92:92,9,0	0/0:29,0:19:35.80:0,36,404	0/0:26,0:20:48.14:0,48,603	0/0:24,0:24:69.23:0,69,915	0/0:26,0:26:63.09:0,63,835	0/0:30,0:31:87.16:0,87,1101	0/0:36,0:33:80.95:0,81,922	0/0:20,0:20:57.15:0,57,727	1/1:11,1:12:18.86:378,19,0	./.	0/0:18,0:18:45.12:0,45,567	0/0:11,0:11:30.10:0,30,396	0/0:19,0:19:54.18:0,54,716	0/0:21,0:21:48.14:0,48,620	0/1:14,1:15:18.60:203,0,19	1/1:4,3:7:9.03:132,9,0	0/0:29,0:29:66.37:0,66,1017	0/0:19,0:16:39.12:0,39,504	0/0:17,0:15:42.14:0,42,558	0/0:74,0:74:99:0,174,2266	0/0:14,0:14:39.11:0,39,502	0/0:22,0:22:57.16:0,57,740	0/0:43,0:43:99:0,117,1540	0/0:22,0:22:66.20:0,66,860	0/0:33,0:29:87.18:0,87,1120	0/0:16,0:16:39.13:0,39,517	0/0:11,0:11:20.59:0,21,334
chr10	84626128	.	CACACAG	C	822.37	PASS	AB=0.789;AC=9;AF=0.167;AN=54;BaseQRankSum=7.281;DP=642;FS=9.779;HRun=0;HaplotypeScore=153.5191;InbreedingCoeff=0.7861;MQ=57.75;MQ0=5;MQRankSum=-5.119;QD=13.26;ReadPosRankSum=-1.367;VQSLOD=2.3702;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:2.47:51,2,0	1/1:5,1:6:8.99:92,9,0	0/0:26,0:16:35.80:0,36,404	0/0:26,0:20:48.14:0,48,603	0/0:24,0:24:69.23:0,69,1650	0/0:25,0:25:65.43:0,65,1350	0/0:32,0:32:90.19:0,90,1733	0/0:35,0:32:86.76:0,87,1132	0/0:19,0:19:57.19:0,57,1518	1/1:10,1:11:32.93:470,33,0	./.	0/0:19,0:19:48.16:0,48,1097	0/0:12,0:12:33.11:0,33,913	0/0:19,0:19:57.19:0,57,1228	0/0:20,0:20:51.17:0,51,1355	0/1:11,4:15:18.40:219,0,18	1/1:7,0:7:11.46:138,11,0	0/0:29,0:29:84.26:0,84,2139	0/0:20,0:16:45.14:0,45,779	0/0:19,0:17:48.16:0,48,1046	0/0:73,0:73:99:0,187,4135	0/0:15,0:15:42.14:0,42,1073	0/0:22,0:22:60.20:0,60,1421	0/0:43,0:43:99:0,123,3289	0/0:23,0:23:69.23:0,69,1668	0/0:33,0:29:87.29:0,87,1636	0/0:18,0:18:45.15:0,45,906	0/0:11,0:11:33.11:0,33,569
chr10	84626132	.	CAG	C	351.64	PASS	AB=0.714;AC=9;AF=0.161;AN=56;BaseQRankSum=7.849;DP=645;FS=15.534;HRun=0;HaplotypeScore=110.9244;InbreedingCoeff=0.7495;MQ=55.57;MQ0=6;MQRankSum=-2.421;QD=5.67;ReadPosRankSum=-2.589;VQSLOD=1.4194;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,4:22:1.98:6,2,0	1/1:4,1:5:8.89:67,9,0	0/0:24,0:14:25.26:0,25,430	0/0:23,0:17:39.84:0,40,705	0/0:25,0:25:72.19:0,72,1286	0/0:24,0:24:60.53:0,61,1167	0/0:33,0:33:93.23:0,93,1647	0/0:37,0:34:99:0,99,1544	0/0:19,0:19:57.20:0,57,1099	1/1:7,6:13:28.69:233,29,0	0/0:13,3:16:0:0,0,0	0/0:18,0:18:48.16:0,48,916	0/0:13,0:13:38.98:0,39,605	0/0:22,0:22:66.11:0,66,1038	0/0:21,0:21:57.15:0,57,974	0/1:9,6:15:42.78:129,0,43	1/1:5,2:7:8.42:57,8,0	0/0:29,0:29:83.94:0,84,1532	0/0:22,0:17:50.30:0,50,759	0/0:19,0:17:51.16:0,51,913	0/0:70,0:70:99:0,192,3412	0/0:15,0:15:45.09:0,45,789	0/0:23,0:22:60.18:0,60,1110	0/0:43,0:43:99:0,123,2294	0/0:24,0:24:72.22:0,72,1294	0/0:35,0:31:90.69:0,91,1553	0/0:17,0:17:48.12:0,48,808	0/0:11,0:11:32.83:0,33,506
chr10	84626134	.	G	GAC	298.73	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=7.393;DP=651;FS=6.031;HRun=0;HaplotypeScore=116.7204;InbreedingCoeff=0.6967;MQ=55.00;MQ0=6;MQRankSum=-4.583;QD=4.82;ReadPosRankSum=-1.611;VQSLOD=2.4573;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,2:23:1.42:5,1,0	0/1:4,0:4:0:0,0,0	0/0:22,0:12:13.29:0,13,143	0/0:22,0:15:29.22:0,29,314	0/0:25,0:25:69.21:0,69,896	0/0:24,0:24:58.99:0,59,748	0/0:34,0:34:90.17:0,90,1141	0/0:36,0:33:84.20:0,84,1053	0/0:21,0:21:59.99:0,60,771	1/1:13,0:13:24.64:260,25,0	0/0:16,0:16:0:0,0,0	0/0:19,0:19:48.16:0,48,639	0/0:13,0:13:36.10:0,36,462	0/0:22,0:22:57.16:0,57,727	0/0:20,0:20:51.15:0,51,662	0/1:15,0:15:25.07:68,0,25	1/1:5,2:7:11.36:92,11,0	0/0:30,0:30:60.57:0,61,1015	0/0:21,0:16:38.47:0,38,461	0/0:19,0:17:45.13:0,45,582	0/0:71,0:71:99:0,177,2338	0/0:15,0:15:45.13:0,45,581	0/0:23,0:22:57.17:0,57,742	0/0:46,0:46:99:0,126,1635	0/0:25,0:25:66.20:0,66,861	0/0:38,0:34:78.66:0,79,994	0/0:16,0:16:45.12:0,45,565	0/0:11,0:11:30.09:0,30,378
chr10	84626140	.	CAG	C	280.05	PASS	AB=0.737;AC=7;AF=0.125;AN=56;BaseQRankSum=7.565;DP=646;FS=5.690;HRun=0;HaplotypeScore=111.0530;InbreedingCoeff=0.7007;MQ=54.20;MQ0=10;MQRankSum=-6.103;QD=5.19;ReadPosRankSum=-2.481;VQSLOD=2.3582;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,4:21:1.82:6,2,0	0/0:1,1:2:0:0,0,0	0/0:18,0:6:16.67:0,17,115	0/0:20,0:12:15.84:0,16,352	0/0:24,0:24:72.19:0,72,1284	0/0:25,0:25:62.69:0,63,1125	0/0:35,0:35:99:0,99,1768	0/0:41,0:38:99:0,111,1750	0/0:24,0:24:69.19:0,69,1219	1/1:5,6:11:29.13:228,29,0	0/0:11,5:16:0:0,0,0	0/0:21,0:21:54.07:0,54,968	0/0:14,0:14:42.11:0,42,741	0/0:20,0:20:60.18:0,60,1080	0/0:20,0:20:54.19:0,54,1032	0/1:9,5:14:42.48:94,0,42	1/1:4,3:7:11.51:80,12,0	0/0:30,0:30:87.07:0,87,1560	0/0:20,0:15:42.01:0,42,630	0/0:19,0:17:51.09:0,51,877	0/0:74,0:72:99:0,192,3378	0/0:16,0:16:48.14:0,48,858	0/0:23,0:22:60.14:0,60,1012	0/0:45,0:45:99:0,129,2384	0/0:23,0:23:66.21:0,66,1239	0/0:35,0:31:86.18:0,86,1471	0/0:17,0:17:51.08:0,51,813	0/0:10,0:10:30.10:0,30,567
chr10	84626144	.	CACACAG	C	463.81	PASS	AB=0.842;AC=9;AF=0.173;AN=52;BaseQRankSum=7.944;DP=652;FS=0.818;HRun=0;HaplotypeScore=158.9432;InbreedingCoeff=0.6494;MQ=52.64;MQ0=11;MQRankSum=-6.795;QD=5.04;ReadPosRankSum=-3.654;VQSLOD=1.7591;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:22:0.85:2,1,0	./.	./.	0/1:18,0:9:0.60:1,0,165	0/0:26,0:26:72.19:0,72,1655	0/0:24,0:24:53.23:0,53,1262	0/0:34,0:34:99:0,99,1868	0/0:37,0:34:96.31:0,96,1302	0/0:24,0:24:69.20:0,69,1645	1/1:13,1:14:38.69:413,39,0	0/1:11,5:16:0:0,0,0	0/0:23,0:23:60.07:0,60,1216	0/0:16,0:16:48.16:0,48,1116	0/0:20,0:20:57.16:0,57,1197	0/0:22,0:22:60.20:0,60,1478	0/1:9,4:13:28.69:49,0,29	1/1:8,0:8:11:122,11,0	0/0:32,0:32:96.32:0,96,2297	0/0:19,0:14:34.92:0,35,628	0/0:20,0:18:51.17:0,51,1086	0/0:74,0:72:99:0,184,4091	0/0:15,0:15:45.15:0,45,1105	0/0:22,0:21:48.16:0,48,1264	0/0:45,0:45:99:0,117,3209	0/0:24,0:24:66.21:0,66,1613	0/0:34,0:30:71.98:0,72,1433	0/0:17,0:17:45.15:0,45,907	0/0:12,0:12:30.02:0,30,511
chr10	84626148	.	CAG	C	165.83	PASS	AB=0.923;AC=7;AF=0.125;AN=56;BaseQRankSum=7.310;DP=650;FS=0.000;HRun=0;HaplotypeScore=113.0948;InbreedingCoeff=0.6147;MQ=52.33;MQ0=13;MQRankSum=-5.859;QD=2.81;ReadPosRankSum=-2.288;VQSLOD=1.5597;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,2:22:1.25:3,1,0	0/0:3,0:2:0:0,0,0	0/0:16,0:2:2.68:0,3,11	0/0:16,0:9:10.36:0,10,125	0/0:25,0:25:75.15:0,75,1264	0/0:23,0:23:44.93:0,45,1021	0/0:36,0:36:99:0,102,1766	0/0:37,0:34:99:0,102,1743	0/0:24,0:24:69.19:0,69,1228	1/1:11,3:14:7.23:173,7,0	0/0:12,2:14:0:0,0,0	0/0:23,0:23:55.67:0,56,1037	0/0:16,0:16:48.16:0,48,901	0/0:20,0:20:60.16:0,60,1040	0/0:23,0:23:63.18:0,63,1116	0/1:11,1:12:48.35:65,0,48	1/1:9,1:10:6.83:38,7,0	0/0:33,1:34:83.44:0,83,1648	0/0:16,0:12:35.81:0,36,567	0/0:19,0:17:51.16:0,51,941	0/0:75,0:73:99:0,193,3404	0/0:16,0:16:48.14:0,48,856	0/0:22,0:21:51.16:0,51,944	0/0:44,0:44:99:0,120,2234	0/0:25,0:25:72.19:0,72,1256	0/0:35,0:31:86.07:0,86,1361	0/0:17,0:17:51.13:0,51,882	0/0:12,0:12:30.03:0,30,439
chr10	84626150	.	G	GAC	267.42	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=6.846;DP=643;FS=0.000;HRun=0;HaplotypeScore=112.4835;InbreedingCoeff=0.6283;MQ=52.20;MQ0=13;MQRankSum=-6.349;QD=4.53;ReadPosRankSum=-2.691;VQSLOD=1.6791;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:23:1.25:3,1,0	0/0:3,0:2:0:0,0,0	0/0:15,0:2:3.01:0,3,30	0/0:15,0:8:8.93:0,9,91	0/0:24,0:24:66.22:0,66,876	0/0:21,0:21:43.93:0,44,666	0/0:39,0:39:96.27:0,96,1227	0/0:37,0:34:87.27:0,87,1130	0/0:23,0:23:60.18:0,60,798	1/1:11,3:14:28.75:267,29,0	0/0:12,0:12:0:0,0,0	0/0:23,0:23:54.07:0,54,694	0/0:17,0:17:51.15:0,51,663	0/0:19,0:19:54.18:0,54,715	0/0:23,0:23:63:0,63,837	0/1:12,0:12:28.43:28,0,31	1/1:5,4:9:6.02:90,6,0	0/0:34,0:34:96.19:0,96,1230	0/0:17,0:13:27.08:0,27,348	0/0:20,0:18:51.15:0,51,662	0/0:74,0:72:99:0,180,2374	0/0:16,0:16:45.13:0,45,584	0/0:22,0:21:54.14:0,54,676	0/0:42,0:42:99:0,114,1514	0/0:24,0:24:69.21:0,69,903	0/0:34,0:30:65.03:0,65,852	0/0:18,0:18:54.16:0,54,700	0/0:12,0:12:18.06:0,18,236
chr10	84626197	.	GCACATA	G	924.85	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.642;DP=686;FS=0.000;HRun=0;HaplotypeScore=172.8719;InbreedingCoeff=0.9008;MQ=58.06;MQ0=7;MQRankSum=-2.974;QD=24.34;ReadPosRankSum=0.067;VQSLOD=3.0449;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:21.07:0,21,524	0/0:6,0:6:9.03:0,9,175	0/0:44,0:24:60.89:0,61,1406	0/0:46,0:26:62.08:0,62,1402	0/0:31,0:31:87.25:0,87,2557	0/0:27,0:27:65.88:0,66,1981	0/0:31,0:31:72.21:0,72,2169	0/0:30,0:30:81.19:0,81,2075	0/0:18,0:18:45.15:0,45,1271	0/0:24,0:24:54.83:0,55,714	0/0:13,0:13:10.18:0,10,73	0/0:16,0:16:42.12:0,42,1228	0/0:19,0:19:51.18:0,51,1559	0/0:17,0:17:42.14:0,42,1326	0/0:24,0:24:66.20:0,66,2021	0/0:11,0:11:8.97:0,9,134	0/0:15,0:15:21.64:0,22,182	0/0:29,0:29:78.18:0,78,2068	0/0:20,0:20:42.12:0,42,1137	0/0:24,0:24:63.22:0,63,1964	0/0:59,0:59:99:0,159,4655	0/0:17,0:17:51.16:0,51,1478	0/0:19,0:19:48.16:0,48,1521	0/0:30,0:30:69.16:0,69,1856	0/0:19,0:19:51.16:0,51,1598	1/1:3,24:27:58.71:794,59,0	0/0:27,0:26:81.23:0,81,2360	1/1:3,8:11:11.61:247,12,0
chr10	84626487	.	AAGAT	A	5754.01	PASS	AB=0.788;AC=26;AF=0.464;AN=56;BaseQRankSum=12.526;DP=594;FS=9.569;HRun=0;HaplotypeScore=97.1272;InbreedingCoeff=0.8132;MQ=67.24;MQ0=5;MQRankSum=0.029;QD=19.44;ReadPosRankSum=-2.742;VQSLOD=3.1111;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:14.69:0,15,91	1/1:3,3:6:9.03:133,9,0	0/0:28,0:20:2.99:0,3,138	0/0:27,0:16:14.95:0,15,234	0/0:32,0:32:66.18:0,66,1372	1/1:3,12:15:21.07:339,21,0	1/1:6,14:20:24.08:388,24,0	1/1:17,15:30:45:513,45,0	0/0:15,0:15:36.12:0,36,801	1/1:5,18:23:54.17:826,54,0	1/1:10,15:25:33.11:533,33,0	0/0:19,0:19:45.15:0,45,947	0/0:18,0:17:36.12:0,36,768	0/0:24,0:24:12.32:0,12,1074	0/1:22,1:23:12.36:12,0,618	0/1:8,13:20:9.95:179,0,10	1/1:7,16:22:12.11:464,12,0	0/0:17,0:16:33.07:0,33,607	1/1:6,13:19:39.07:568,39,0	1/1:6,23:29:42.14:679,42,0	1/1:4,3:7:9.03:145,9,0	0/0:18,0:18:39.13:0,39,850	0/0:32,0:32:75.26:0,75,1679	0/0:21,0:21:45.13:0,45,927	1/1:5,17:23:32.32:491,32,0	0/0:19,0:19:27.09:0,27,634	1/1:10,20:30:30.02:485,30,0	0/0:15,0:15:36.07:0,36,811
chr10	84626694	.	G	GAAAG	3096.98	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=4.878;DP=477;FS=11.642;HRun=0;HaplotypeScore=112.7677;InbreedingCoeff=0.5302;MQ=58.86;MQ0=24;MQRankSum=-4.840;QD=8.95;ReadPosRankSum=-3.912;VQSLOD=0.8603;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:19:28.11:180,28,0	1/1:5,0:4:11.90:86,12,0	0/0:22,0:6:3.01:0,3,36	0/0:24,0:11:14.76:0,15,113	0/0:18,0:17:13.24:0,13,107	1/1:18,0:18:18.96:347,19,0	1/1:18,0:15:22.23:187,22,0	0/1:35,0:31:8.02:311,0,8	0/0:11,0:11:3.21:0,3,109	1/1:18,0:17:11.79:211,12,0	1/1:21,0:20:31.14:217,31,0	0/0:13,0:13:20.71:0,21,194	0/0:11,0:7:7.96:0,8,64	0/0:14,0:13:4.11:0,4,108	0/1:18,0:21:6.01:6,0,164	1/1:24,0:24:35.04:266,35,0	1/1:20,0:19:32.94:258,33,0	0/0:8,0:8:6.36:0,6,67	1/1:21,0:19:17.87:160,18,0	1/1:10,4:14:20.12:162,20,0	0/1:10,0:10:3.97:169,0,4	0/1:9,0:9:15.80:16,0,39	0/0:10,0:9:9.53:0,10,157	0/1:25,0:24:62.07:62,0,157	1/1:11,0:11:17.99:189,18,0	1/1:18,0:17:21:215,21,0	1/1:26,0:24:11.89:186,12,0	1/1:9,0:8:5.97:64,6,0
chr10	84626704	.	A	AAGAG	1261.75	PASS	AB=0.996;AC=33;AF=0.635;AN=52;BaseQRankSum=-0.059;DP=493;FS=0.856;HRun=0;HaplotypeScore=130.6817;InbreedingCoeff=0.2272;MQ=53.66;MQ0=26;MQRankSum=1.743;QD=3.41;ReadPosRankSum=0.523;VQSLOD=1.9833;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:16:9.80:0,10,50	0/1:7,0:6:0:0,0,0	./.	./.	1/1:13,0:23:5.73:35,6,0	1/1:19,0:19:15:145,15,0	0/0:14,0:11:3.35:0,3,16	0/1:35,0:30:0:0,0,0	1/1:15,0:15:17.98:152,18,0	0/0:16,0:15:2.80:0,3,15	0/1:21,0:20:1.49:1,0,18	1/1:16,0:16:12.41:94,12,0	1/1:10,0:10:8.96:69,9,0	1/1:16,0:18:20.22:162,20,0	1/1:24,0:23:15:159,15,0	0/0:21,0:21:13.66:0,14,117	0/1:19,0:18:18.46:19,0,18	1/1:11,0:11:15.80:117,16,0	0/0:22,0:20:2.91:0,3,20	0/1:17,0:16:8.29:8,0,39	0/1:14,0:14:18.96:19,0,36	1/1:10,0:10:6.01:75,6,0	1/1:15,0:14:5.91:49,6,0	1/1:15,13:27:6.02:141,6,0	1/1:11,0:11:6:52,6,0	0/1:18,0:17:25.60:26,0,46	0/1:24,0:23:83.14:83,0,92	0/1:7,0:6:12.99:13,0,21
chr10	84626706	.	G	GAA	2537.08	PASS	AB=0.967;AC=24;AF=0.429;AN=56;BaseQRankSum=4.560;DP=496;FS=6.775;HRun=3;HaplotypeScore=103.2149;InbreedingCoeff=0.1622;MQ=53.27;MQ0=26;MQRankSum=-2.671;QD=8.32;ReadPosRankSum=-0.441;VQSLOD=-0.0671;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:15:9.26:146,9,0	0/1:7,0:6:5.14:72,0,5	0/0:12,0:3:3.01:0,3,36	0/0:16,0:7:14.75:0,15,113	0/0:25,0:24:2.92:0,3,138	0/1:19,0:19:17.39:234,0,17	1/1:15,0:12:28.21:242,28,0	0/1:36,0:32:27.55:304,0,28	0/0:15,0:15:23.73:0,24,215	1/1:17,0:15:2.29:179,2,0	1/1:21,0:20:20.62:202,21,0	0/0:16,0:16:27.43:0,27,240	0/0:14,0:10:12.28:0,12,109	0/1:19,0:18:47.84:48,0,115	0/0:23,0:22:31.23:0,31,232	1/1:18,1:19:6.08:258,6,0	1/1:18,1:18:27.76:249,28,0	0/0:12,0:11:17.20:0,17,124	0/1:22,0:20:41.09:133,0,41	0/1:17,0:16:81.48:94,0,81	0/1:14,0:14:81.64:138,0,82	0/0:11,0:11:5.60:0,6,47	0/0:17,0:16:8.99:0,9,157	0/0:29,0:27:24.98:0,25,207	1/1:11,0:11:18.28:164,18,0	0/1:20,0:19:99:124,0,214	0/1:13,13:24:98.82:99,0,214	0/1:5,0:4:33.33:35,0,33
chr10	84627948	.	GC	G	2003.62	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.787;DP=685;FS=7.758;HRun=2;HaplotypeScore=76.9704;InbreedingCoeff=0.9912;MQ=62.99;MQ0=0;MQRankSum=-1.779;QD=30.36;ReadPosRankSum=1.566;VQSLOD=2.8435;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1701	0/0:13,0:13:39.13:0,39,583	0/0:28,0:24:66.22:0,66,987	0/0:34,1:32:83.82:0,84,1191	0/0:20,0:20:60.19:0,60,877	1/1:1,14:15:33.05:408,33,0	0/0:18,0:18:48.16:0,48,716	0/0:18,0:18:54.18:0,54,807	0/0:32,0:32:93.32:0,93,1393	0/0:28,0:28:84.28:0,84,1241	0/0:16,0:16:48.14:0,48,679	0/0:32,0:32:96.31:0,96,1417	0/0:26,0:26:75.25:0,75,1121	0/0:21,0:21:63.21:0,63,942	0/0:29,0:29:87.29:0,87,1303	0/0:28,0:28:84.28:0,84,1256	0/0:38,0:38:99:0,114,1654	0/0:23,0:23:69.11:0,69,985	0/0:15,0:15:42.14:0,42,625	0/0:28,0:28:81.73:0,82,1193	0/0:27,0:27:78.24:0,78,1129	0/0:24,0:24:72.17:0,72,962	0/0:11,0:11:33.11:0,33,495	0/0:39,0:39:99:0,117,1749	1/1:1,21:22:51.17:662,51,0	1/1:0,25:25:75.21:938,75,0	0/0:30,0:29:90.29:0,90,1329	1/1:0,4:4:12.04:154,12,0
chr10	84628664	.	GTAGA	G	3979.64	PASS	AC=34;AF=0.708;AN=48;BaseQRankSum=4.544;DP=610;FS=0.000;HRun=0;HaplotypeScore=109.5161;InbreedingCoeff=0.7946;MQ=75.78;MQ0=5;MQRankSum=-0.266;QD=10.84;ReadPosRankSum=2.036;VQSLOD=3.0235;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:18.06:0,18,414	1/1:4,1:5:3.01:45,3,0	./.	./.	1/1:19,12:30:30.10:443,30,0	1/1:13,4:17:12.04:180,12,0	1/1:12,2:14:3.01:45,3,0	./.	0/0:13,0:19:6.02:0,6,104	1/1:19,12:30:36.12:530,36,0	1/1:15,7:23:14.80:225,15,0	1/1:16,6:22:12.04:180,12,0	1/1:14,0:14:6.01:68,6,0	0/0:19,0:19:21.07:0,21,482	1/1:19,15:32:27.09:405,27,0	1/1:12,0:18:9.01:84,9,0	1/1:27,0:30:3:28,3,0	1/1:15,10:24:21.07:315,21,0	0/0:24,0:24:9.03:0,9,207	0/0:22,0:29:20.55:0,21,290	0/0:14,0:14:18.06:0,18,413	1/1:20,5:25:12.04:180,12,0	1/1:11,7:18:15.05:225,15,0	1/1:8,2:10:6.02:90,6,0	1/1:10,7:17:15.05:225,15,0	1/1:18,15:33:48.16:714,48,0	0/0:28,0:27:30.10:0,30,686	./.
chr10	84630029	.	T	TA	1111.80	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.662;DP=467;FS=0.000;HRun=10;HaplotypeScore=45.9989;InbreedingCoeff=0.8428;MQ=67.59;MQ0=3;MQRankSum=0.807;QD=22.24;ReadPosRankSum=1.496;VQSLOD=4.3190;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,1:20:24.99:0,25,411	0/0:10,0:10:23.97:0,24,197	0/0:13,0:7:4.59:0,5,27	0/0:14,0:9:7.84:0,8,65	0/0:19,0:19:53.94:0,54,443	1/1:6,20:26:60.15:639,60,0	0/0:13,0:13:35.96:0,36,296	0/0:33,0:33:46.11:0,46,535	0/0:12,0:12:32.96:0,33,271	0/0:18,0:18:47.93:0,48,392	0/0:21,0:21:56.91:0,57,465	0/0:10,0:10:29.95:0,30,243	0/0:13,0:13:29.96:0,30,246	0/0:13,0:13:32.95:0,33,271	0/0:14,0:14:35.93:0,36,293	0/0:15,0:15:41.93:0,42,341	0/0:36,0:37:97.76:0,98,776	0/0:16,0:16:32.93:0,33,271	0/0:14,0:13:26.96:0,27,222	0/0:20,0:20:47.90:0,48,387	0/0:10,0:10:29.95:0,30,243	0/0:4,0:4:11.97:0,12,96	0/0:17,0:17:44.92:0,45,366	0/0:17,0:17:41.88:0,42,336	1/1:6,18:24:57.08:594,57,0	0/0:15,0:15:41.95:0,42,345	0/0:27,0:27:65.89:0,66,537	0/0:2,0:2:5.99:0,6,49
chr10	84630834	.	AG	A	1306.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.439;DP=653;FS=2.137;HRun=2;HaplotypeScore=66.1005;InbreedingCoeff=0.9860;MQ=68.41;MQ0=0;MQRankSum=-0.238;QD=32.67;ReadPosRankSum=0.685;VQSLOD=3.5429;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:40:99:1402,108,0	0/0:12,0:12:33.11:0,33,494	0/0:33,0:32:71.41:0,71,1127	0/0:26,0:26:72.24:0,72,1066	0/0:15,0:15:39.05:0,39,534	0/0:17,0:17:48.15:0,48,699	0/0:30,0:30:87.29:0,87,1302	0/0:33,0:33:90.30:0,90,1347	0/0:29,0:29:87.29:0,87,1303	0/0:20,0:20:57.19:0,57,853	0/0:10,0:10:26.88:0,27,386	0/0:20,0:20:57.14:0,57,811	0/0:25,0:25:69.22:0,69,1010	0/0:21,0:21:54.17:0,54,789	0/0:26,0:26:75.25:0,75,1124	0/0:24,0:24:72.24:0,72,1079	0/0:32,0:32:96.33:0,96,1439	0/0:33,0:33:87.29:0,87,1304	0/0:20,0:20:57.19:0,57,853	0/0:13,0:13:36.12:0,36,540	0/0:49,0:49:99:0,144,2155	0/0:13,0:13:30.06:0,30,425	0/0:8,0:8:18.06:0,18,270	0/0:37,0:37:99:0,108,1615	0/0:14,0:14:36.12:0,36,539	0/0:18,0:18:51.16:0,51,745	0/0:24,0:24:69.23:0,69,1033	0/0:11,0:11:21.07:0,21,315
chr10	84631298	.	CTGATGGTGA	C	1150.97	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=6.819;DP=695;FS=21.668;HRun=0;HaplotypeScore=174.7707;InbreedingCoeff=0.8372;MQ=72.68;MQ0=5;MQRankSum=-5.476;QD=17.71;ReadPosRankSum=1.152;VQSLOD=1.6596;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:53:99:0,117,4428	0/0:10,0:10:24.08:0,24,924	0/0:32,0:24:15.70:0,16,866	0/0:26,0:17:38.54:0,39,855	0/0:19,0:19:45.13:0,45,1581	1/1:5,13:18:21.07:534,21,0	0/0:25,0:25:66.23:0,66,2326	0/0:35,0:34:63.22:0,63,1777	0/0:28,0:28:54.18:0,54,2153	0/0:27,0:26:60.21:0,60,2028	0/0:19,0:19:51.14:0,51,1702	0/0:18,0:18:36.12:0,36,1140	0/0:20,0:20:48.13:0,48,1728	0/0:21,0:21:36.12:0,36,1275	0/0:21,0:21:60.17:0,60,2211	0/0:13,0:13:27.05:0,27,809	0/0:43,0:43:96.28:0,96,3610	0/0:22,0:22:57.17:0,57,2140	0/1:21,0:20:2.21:2,0,995	0/0:18,0:18:42:0,42,1461	0/0:48,0:48:99:0,105,4048	0/0:18,0:18:45.15:0,45,1697	0/0:15,0:15:39.13:0,39,1387	0/0:43,0:43:99:0,105,4408	1/1:8,18:26:27.09:737,27,0	0/0:34,0:34:78.26:0,78,2941	0/0:15,0:13:33.07:0,33,1031	0/0:6,0:6:15.02:0,15,490
chr10	84631508	.	AC	A	1765.40	PASS	AB=0.679;AC=44;AF=0.957;AN=46;BaseQRankSum=-1.670;DP=256;FS=0.000;HRun=3;HaplotypeScore=38.6012;InbreedingCoeff=-0.0496;MQ=41.03;MQ0=34;MQRankSum=-1.609;QD=7.88;ReadPosRankSum=-1.361;VQSLOD=0.0568;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:10:9.03:111,9,0	1/1:1,4:4:2.97:20,3,0	./.	0/1:5,1:6:23.44:60,0,23	1/1:1,7:6:3.01:36,3,0	1/1:0,11:5:6.02:74,6,0	./.	1/1:6,20:21:45.14:555,45,0	1/1:3,16:11:2.97:21,3,0	1/1:4,3:6:9.03:111,9,0	./.	1/1:0,12:6:3.01:37,3,0	1/1:1,13:9:3.01:37,3,0	1/1:2,15:8:5.85:51,6,0	1/1:4,14:10:5.97:56,6,0	./.	1/1:0,3:3:3.01:37,3,0	1/1:0,1:1:3.01:37,3,0	1/1:1,7:5:14.96:163,15,0	1/1:1,8:8:3.01:37,3,0	0/1:0,3:3:0.05:0,0,0	1/1:3,5:8:5.98:57,6,0	1/1:5,3:5:5.92:39,6,0	./.	1/1:2,4:5:8.99:94,9,0	1/1:2,4:4:6.02:74,6,0	1/1:2,14:12:9.01:110,9,0	1/1:0,2:2:3.01:37,3,0
chr10	84631513	.	TC	T	1906.16	PASS	AB=0.750;AC=44;AF=0.917;AN=48;BaseQRankSum=0.290;DP=247;FS=0.000;HRun=2;HaplotypeScore=39.6300;InbreedingCoeff=0.1190;MQ=48.30;MQ0=33;MQRankSum=-2.813;QD=8.91;ReadPosRankSum=1.160;VQSLOD=1.0987;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:10:11.97:99,12,0	1/1:0,4:4:3:27,3,0	0/0:4,0:1:2.96:0,3,19	0/1:12,0:10:32.76:35,0,33	1/1:0,10:9:6.01:64,6,0	1/1:0,12:6:6.01:58,6,0	./.	1/1:2,22:20:57.08:621,57,0	1/1:1,16:10:3:27,3,0	1/1:1,3:3:9.03:106,9,0	./.	1/1:0,12:6:3:26,3,0	1/1:0,13:8:3:27,3,0	1/1:1,16:8:7.82:60,8,0	1/1:0,14:8:6.01:60,6,0	./.	1/1:0,3:3:3.01:32,3,0	1/1:1,2:3:6.02:70,6,0	1/1:0,8:5:15.05:182,15,0	1/1:0,9:8:3:29,3,0	0/1:0,3:3:0.05:0,0,0	1/1:0,6:6:9:78,9,0	1/1:0,4:2:5.98:47,6,0	./.	1/1:1,5:6:12:106,12,0	1/1:0,5:5:9.03:105,9,0	1/1:0,15:12:11.95:114,12,0	1/1:0,2:2:3.01:32,3,0
chr10	84631518	.	T	TA	2980.70	PASS	AB=0.500;AC=45;AF=0.900;AN=50;BaseQRankSum=0.902;DP=288;FS=16.781;HRun=1;HaplotypeScore=45.2085;InbreedingCoeff=0.4725;MQ=51.39;MQ0=33;MQRankSum=-2.537;QD=11.92;ReadPosRankSum=2.537;VQSLOD=0.3863;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,10:11:12:135,12,0	1/1:1,4:5:6.01:60,6,0	0/0:7,1:5:9.02:0,9,97	0/0:12,0:11:25.13:0,25,200	1/1:0,12:10:9.46:98,9,0	1/1:1,12:7:6.02:73,6,0	./.	1/1:1,25:22:63.17:846,63,0	1/1:1,19:13:6.02:78,6,0	1/1:0,8:7:15.05:215,15,0	1/1:1,13:13:8.95:86,9,0	1/1:0,13:7:5.98:54,6,0	1/1:0,16:11:6.02:80,6,0	1/1:1,17:9:9.03:111,9,0	1/1:2,14:10:9.03:118,9,0	./.	1/1:0,3:3:3.01:39,3,0	1/1:0,4:4:8.99:103,9,0	1/1:0,9:6:18.06:254,18,0	1/1:1,11:11:3.01:36,3,0	0/1:0,3:3:0:0,0,0	1/1:0,6:6:9.02:98,9,0	1/1:0,9:7:6.01:59,6,0	./.	1/1:1,5:6:15:154,15,0	1/1:1,5:6:12.04:165,12,0	1/1:2,14:12:15.05:202,15,0	1/1:0,2:2:3.01:39,3,0
chr10	84631581	.	AT	A	2239.79	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=4.956;DP=478;FS=7.355;HRun=4;HaplotypeScore=60.0196;InbreedingCoeff=0.8386;MQ=60.98;MQ0=1;MQRankSum=-0.905;QD=21.33;ReadPosRankSum=2.057;VQSLOD=2.5869;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:26.98:27,0,88	0/0:10,0:10:30.10:0,30,418	0/0:9,0:7:17.53:0,18,151	0/0:9,0:9:23.74:0,24,204	0/0:25,0:25:66.13:0,66,835	1/1:3,13:16:28.31:386,28,0	0/0:12,0:12:33.07:0,33,439	0/0:30,0:29:75.15:0,75,963	0/0:18,0:18:33.53:0,34,424	0/0:28,0:28:82.42:0,82,1008	0/0:25,0:25:63.07:0,63,796	0/0:8,0:8:18.02:0,18,229	0/0:18,0:17:39.13:0,39,543	0/0:14,0:14:36.03:0,36,474	0/0:19,0:18:7.39:0,7,69	0/0:11,0:10:24.07:0,24,321	0/0:15,0:15:42.14:0,42,586	0/0:7,0:7:18.06:0,18,251	0/0:16,0:16:48.12:0,48,646	0/0:33,0:32:87.20:0,87,1144	0/0:8,0:8:24.08:0,24,333	0/0:9,0:9:18.52:0,19,236	0/0:23,0:21:51.04:0,51,618	0/0:7,0:7:18.06:0,18,252	1/1:1,27:28:75.23:896,75,0	1/1:4,16:20:51.12:596,51,0	0/0:19,0:16:48.13:0,48,643	1/1:1,14:14:42.13:500,42,0
chr10	84634757	.	TA	T	927.65	PASS	AB=0.838;AC=12;AF=0.214;AN=56;BaseQRankSum=5.622;DP=389;FS=0.621;HRun=13;HaplotypeScore=46.6623;InbreedingCoeff=0.7324;MQ=83.86;MQ0=0;MQRankSum=-0.937;QD=11.04;ReadPosRankSum=2.710;VQSLOD=2.9997;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:29.64:0,30,259	1/1:2,6:8:17.89:131,18,0	0/0:25,0:24:20.25:0,20,274	0/0:18,0:16:1.17:0,1,157	0/0:14,0:15:30.87:0,31,272	0/0:14,0:16:38.71:0,39,340	0/0:11,0:11:26.99:0,27,253	0/0:27,0:27:51.06:0,51,485	0/0:8,0:8:15:0,15,135	1/1:3,11:14:32.79:239,33,0	1/1:3,13:17:14.60:261,15,0	0/0:17,0:17:36:0,36,322	0/0:16,0:16:42.07:0,42,409	0/0:10,0:10:18:0,18,164	0/0:5,0:7:8:0,8,96	1/1:4,8:12:20.86:153,21,0	1/1:5,17:22:41.64:301,42,0	0/0:7,0:7:15.02:0,15,146	0/0:21,0:21:30.64:0,31,432	0/0:13,0:13:29.99:0,30,277	0/0:10,0:9:27.03:0,27,258	0/0:15,1:16:14.05:0,14,273	0/1:5,1:7:4.67:5,0,61	0/1:3,1:4:12.89:13,0,49	0/0:14,0:14:30.03:0,30,283	0/0:14,1:15:14.04:0,14,277	0/0:16,1:17:13.84:0,14,256	0/0:7,0:7:12.02:0,12,117
chr10	84634897	.	GTAATAATAA	G	1246.76	PASS	AC=14;AF=0.333;AN=42;BaseQRankSum=0.939;DP=243;FS=0.000;HRun=0;HaplotypeScore=70.0712;InbreedingCoeff=0.5825;MQ=79.23;MQ0=2;MQRankSum=-5.556;QD=13.70;ReadPosRankSum=1.382;VQSLOD=1.7743;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:15:13.31:0,13,147	0/0:4,0:6:1.45:0,1,33	./.	./.	0/0:7,0:7:6.02:0,6,185	1/1:5,6:12:15.05:388,15,0	./.	1/1:34,0:32:14.97:148,15,0	0/0:2,0:4:6.02:0,6,235	0/0:10,0:12:1.20:0,1,9	0/0:6,0:7:3.01:0,3,58	./.	0/0:12,0:12:15.05:0,15,651	0/0:2,0:2:3.01:0,3,135	./.	0/0:3,0:3:5.59:0,6,34	1/1:8,3:12:9.03:225,9,0	0/0:6,0:12:24.08:0,24,893	1/1:6,0:6:3:27,3,0	./.	1/1:5,1:6:1.83:35,2,0	0/0:5,0:6:3.01:0,3,58	./.	0/0:3,0:3:6.02:0,6,232	1/1:4,4:8:6.02:163,6,0	0/0:6,0:11:5.19:0,5,55	1/1:8,5:13:15.05:406,15,0	0/0:8,0:13:12.04:0,12,219
chr10	84635234	.	ACT	A	37.02	PASS	AB=0.978;AC=12;AF=0.222;AN=54;BaseQRankSum=2.934;DP=509;FS=0.000;HRun=0;HaplotypeScore=80.8538;InbreedingCoeff=0.0760;MQ=75.92;MQ0=10;MQRankSum=-1.039;QD=0.19;ReadPosRankSum=1.494;VQSLOD=1.2984;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:40:2.37:8,2,0	0/0:9,0:9:10.59:0,11,146	0/1:47,0:24:1.42:3,0,1	0/0:53,1:31:5.09:0,5,51	0/1:7,0:7:23.09:23,0,129	0/0:7,0:17:2.97:0,3,20	0/0:22,0:22:27.80:0,28,244	0/0:38,0:38:28.34:0,28,366	0/0:9,0:9:12.04:0,12,179	0/0:14,0:14:8.32:0,8,293	0/0:5,0:5:6.02:0,6,94	0/1:14,0:14:20.09:20,0,173	0/0:11,0:10:15.01:0,15,209	0/0:8,0:8:11.99:0,12,159	0/0:14,0:14:24:0,24,326	0/1:10,0:10:22.45:22,0,208	0/1:23,0:23:31.16:31,0,433	0/1:15,4:19:2.28:2,0,349	0/0:18,0:17:17.95:0,18,148	0/0:4,0:4:5.99:0,6,49	0/0:33,0:33:38.19:0,38,324	./.	0/1:3,0:3:1.06:1,0,59	0/0:19,11:29:16.04:0,16,708	0/0:10,0:11:6.29:0,6,46	0/1:22,0:21:11.90:32,0,12	0/0:13,0:13:17.95:0,18,150	1/1:11,0:10:4.98:24,5,0
chr10	84635248	.	TCTCTCTCTCTCACTCACA	T	147.55	PASS	AB=1.000;AC=4;AF=0.074;AN=54;BaseQRankSum=3.561;DP=466;FS=13.475;HRun=0;HaplotypeScore=180.4718;InbreedingCoeff=0.3385;MQ=58.10;MQ0=21;MQRankSum=-1.720;QD=1.72;ReadPosRankSum=-3.058;VQSLOD=1.3455;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,31:37:6.49:226,6,0	0/0:10,0:9:12.04:0,12,668	0/1:30,0:9:9.52:10,0,296	0/0:40,0:16:36.79:0,37,943	0/0:11,0:11:24.05:0,24,1402	0/1:16,0:16:6.97:7,0,282	0/0:17,0:16:31.21:0,31,1500	0/0:28,0:28:84.27:0,84,3071	0/0:7,0:7:15.05:0,15,650	0/0:14,0:12:36.11:0,36,1647	0/0:7,0:6:5.89:0,6,318	0/0:12,0:11:27.09:0,27,1293	0/0:9,0:7:18.06:0,18,1028	0/0:9,0:8:22.63:0,23,1004	0/0:13,0:13:30.10:0,30,1681	0/0:10,0:10:30.10:0,30,1319	0/0:22,0:22:63.20:0,63,2499	0/0:19,0:19:48.16:0,48,2231	0/0:10,0:9:27.08:0,27,1058	0/0:5,0:5:6.02:0,6,329	0/0:33,0:33:86.53:0,87,3336	./.	0/0:5,0:4:12.04:0,12,677	0/0:35,0:34:66.18:0,66,3348	0/0:9,0:9:12.50:0,12,494	0/0:25,0:23:68.86:0,69,2308	0/0:14,0:13:25.12:0,25,1266	0/0:13,0:11:30.98:0,31,1146
chr10	84635262	.	TCACA	T	961.99	PASS	AB=0.904;AC=26;AF=0.565;AN=46;BaseQRankSum=2.985;DP=406;FS=8.140;HRun=0;HaplotypeScore=75.2440;InbreedingCoeff=0.5036;MQ=53.85;MQ0=26;MQRankSum=0.779;QD=4.22;ReadPosRankSum=-0.599;VQSLOD=0.6823;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:35:6.01:63,6,0	1/1:5,5:9:5.69:57,6,0	./.	./.	0/0:12,0:12:13.87:0,14,154	0/0:14,0:14:6.02:0,6,89	1/1:17,0:16:5.88:70,6,0	./.	./.	1/1:16,0:14:10.30:124,10,0	0/1:5,4:8:0:0,0,0	0/0:12,0:11:12.04:0,12,198	0/0:8,0:7:5.49:0,5,24	0/0:7,0:6:6.41:0,6,88	0/1:11,1:12:37.33:37,0,89	1/1:10,1:11:12.04:169,12,0	0/1:22,0:21:0.95:250,0,1	0/0:20,0:19:18.53:0,19,324	1/1:5,0:4:2.99:25,3,0	1/1:7,0:6:3.01:40,3,0	1/1:26,0:25:3.57:150,4,0	./.	0/0:6,0:5:6.18:0,6,27	0/0:35,0:34:19.86:0,20,312	0/1:9,0:9:0:0,0,0	1/1:20,0:19:6.01:61,6,0	1/1:12,0:11:4.81:30,5,0	1/1:12,0:10:3.01:38,3,0
chr10	84635522	.	AAAAAAG	A	446.68	PASS	AB=1.000;AC=10;AF=0.185;AN=54;BaseQRankSum=1.775;DP=373;FS=10.126;HRun=0;HaplotypeScore=72.4321;InbreedingCoeff=0.2181;MQ=46.18;MQ0=22;MQRankSum=-5.415;QD=3.49;ReadPosRankSum=3.145;VQSLOD=0.0173;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:59.19:0,59,1109	0/0:2,0:2:6.01:0,6,72	./.	0/0:8,0:3:8.92:0,9,68	0/0:14,0:14:24.19:0,24,347	1/1:8,10:18:17.42:267,17,0	0/0:11,0:9:17.30:0,17,188	0/1:25,0:25:4.92:5,0,396	0/0:6,0:6:8.99:0,9,139	0/1:17,0:15:8.82:9,0,232	0/0:15,0:13:4.68:0,5,342	0/0:7,0:6:8.70:0,9,56	0/0:6,0:6:14.99:0,15,194	0/0:7,0:6:12.04:0,12,341	0/0:12,0:12:14.87:0,15,175	0/0:11,0:8:14.61:0,15,159	0/0:22,0:22:6.91:0,7,376	0/0:16,0:13:12.54:0,13,415	0/1:19,0:19:6.76:7,0,286	0/1:16,0:16:6.10:6,0,327	0/1:5,0:5:9.55:10,0,30	0/0:10,0:10:23.96:0,24,238	0/0:8,0:7:17.88:0,18,231	0/0:16,0:15:30.94:0,31,505	1/1:13,1:14:11.27:260,11,0	0/0:22,0:22:12.13:0,12,449	0/1:14,0:13:23.84:24,0,55	0/0:10,0:7:15.03:0,15,231
chr10	84636072	.	AAC	A	1649.69	PASS	AB=0.968;AC=15;AF=0.268;AN=56;BaseQRankSum=6.546;DP=606;FS=0.000;HRun=0;HaplotypeScore=77.2082;InbreedingCoeff=0.6365;MQ=57.93;MQ0=19;MQRankSum=0.276;QD=11.07;ReadPosRankSum=0.992;VQSLOD=2.7693;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:16:1.25:3,1,0	1/1:4,4:7:9.03:108,9,0	0/0:24,0:8:14.80:0,15,160	0/0:35,0:23:24.41:0,24,367	0/1:17,2:19:23.78:24,0,619	0/0:25,0:25:60.17:0,60,662	0/0:21,1:20:42.14:0,42,663	0/0:26,0:25:45.14:0,45,667	0/0:18,0:18:42.12:0,42,611	1/1:3,16:17:42.09:472,42,0	1/1:3,13:15:21.03:299,21,0	0/0:26,0:26:57.16:0,57,849	0/0:13,2:15:0.16:0,0,480	0/0:22,0:22:12.21:0,12,399	0/0:18,1:19:3.16:0,3,540	1/1:5,10:14:26.45:296,26,0	1/1:11,22:32:51.16:612,51,0	0/0:22,1:23:18.21:0,18,750	0/0:26,0:24:51.01:0,51,653	0/0:23,0:22:54.17:0,54,829	0/0:32,0:32:66.07:0,66,981	0/0:16,0:16:30.09:0,30,438	0/0:18,0:19:31.03:0,31,643	0/0:40,1:41:57.24:0,57,1243	0/0:21,0:21:57.12:0,57,610	0/1:9,0:14:6.04:6,0,185	0/0:24,0:24:57.09:0,57,821	0/1:1,0:4:4.74:5,0,21
chr10	84636451	.	G	GAA	186.77	PASS	AB=0.569;AC=1;AF=0.018;AN=56;BaseQRankSum=3.826;DP=475;FS=0.000;HRun=0;HaplotypeScore=75.2750;InbreedingCoeff=-0.0245;MQ=54.83;MQ0=7;MQRankSum=-0.105;QD=6.44;ReadPosRankSum=0.871;VQSLOD=2.4848;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,15:29:21.03:261,0,21	0/0:1,0:1:3.01:0,3,39	0/0:6,0:3:6:0,6,53	0/0:8,0:6:5.24:0,5,80	0/0:19,0:19:50.35:0,50,666	0/0:18,0:18:42.06:0,42,645	0/0:17,0:17:48.06:0,48,671	0/0:20,0:20:53.39:0,53,772	0/0:15,0:14:39.12:0,39,587	0/0:18,0:18:45.15:0,45,687	0/0:16,0:16:42.13:0,42,581	0/0:7,0:7:15.05:0,15,238	0/0:15,0:15:33:0,33,474	0/0:10,0:10:30.09:0,30,429	0/0:15,0:15:33.07:0,33,460	0/0:21,0:21:45.01:0,45,668	0/0:21,0:21:57.18:0,57,884	0/0:30,0:30:78.19:0,78,1147	0/0:20,0:19:45.72:0,46,643	0/0:18,0:18:51.16:0,51,744	0/0:20,0:20:51.07:0,51,726	0/0:16,0:15:42.12:0,42,618	0/0:18,0:18:45.05:0,45,662	0/0:37,0:37:93.26:0,93,1422	0/0:12,0:12:26.99:0,27,383	0/0:19,0:18:48.15:0,48,729	0/0:18,0:18:29.86:0,30,450	0/0:11,0:8:20.99:0,21,270
chr10	84636642	.	CAA	C	1342.17	PASS	AB=0.709;AC=21;AF=0.375;AN=56;BaseQRankSum=5.577;DP=440;FS=2.265;HRun=16;HaplotypeScore=61.4139;InbreedingCoeff=0.7549;MQ=79.99;MQ0=0;MQRankSum=0.206;QD=6.33;ReadPosRankSum=5.758;VQSLOD=-0.4777;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,1:31:38.47:178,38,0	0/0:3,0:8:15.03:0,15,164	0/0:23,0:16:14.66:0,15,117	0/1:14,1:9:1.46:8,0,1	0/1:4,2:14:26.30:26,0,38	1/1:6,0:20:21.90:94,22,0	1/1:2,9:13:17.65:179,18,0	1/1:10,11:23:34.74:270,35,0	0/0:9,0:8:15.03:0,15,180	0/0:7,0:22:54.06:0,54,558	0/0:11,0:16:35.97:0,36,370	0/0:6,0:7:20.39:0,20,211	0/0:11,0:11:26.94:0,27,275	0/0:7,0:10:16.82:0,17,159	0/0:12,0:12:30.01:0,30,341	0/0:6,0:12:21.03:0,21,226	0/0:10,0:24:32.64:0,33,330	0/0:17,0:21:49.23:0,49,551	1/1:8,5:14:8.84:117,9,0	1/1:5,17:24:41.09:324,41,0	1/1:6,7:13:11.87:100,12,0	0/0:16,1:18:9.15:0,9,308	0/0:14,1:18:7.14:0,7,256	0/0:10,0:11:26.43:0,26,306	1/1:3,0:13:21.86:94,22,0	0/1:7,2:20:23.21:23,0,130	1/1:3,8:12:17.42:137,17,0	0/0:1,0:5:10.10:0,10,48
chr10	84637748	.	TA	T	1788.36	PASS	AB=0.822;AC=20;AF=0.370;AN=54;BaseQRankSum=6.239;DP=306;FS=4.789;HRun=12;HaplotypeScore=30.7364;InbreedingCoeff=0.7491;MQ=60.00;MQ0=26;MQRankSum=1.002;QD=13.25;ReadPosRankSum=3.607;VQSLOD=3.0743;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,3:4:8.97:70,9,0	0/0:11,0:4:2.74:0,3,29	0/0:8,1:4:8.06:0,8,48	0/0:20,0:20:45.56:0,46,457	1/1:3,13:16:38.84:302,39,0	0/0:5,0:5:14.98:0,15,135	0/0:38,1:33:60.90:0,61,781	0/1:4,2:6:8.22:8,0,100	1/1:3,10:12:29.86:232,30,0	1/1:3,14:17:38.85:302,39,0	0/0:5,0:5:14.99:0,15,141	0/0:9,0:9:24.05:0,24,244	0/0:9,0:8:17.96:0,18,160	0/0:6,0:6:18.02:0,18,172	1/1:2,4:6:11.95:93,12,0	1/1:6,17:20:47.80:371,48,0	0/0:13,0:13:33.04:0,33,326	0/1:15,2:13:5.82:6,0,296	0/0:9,0:8:24.05:0,24,244	0/0:4,0:4:11.86:0,12,106	0/0:1,0:1:3.01:0,3,30	0/0:8,0:8:18.04:0,18,183	0/0:6,0:6:11.95:0,12,101	1/1:2,12:12:35.86:279,36,0	1/1:3,12:13:35.86:279,36,0	0/0:14,1:15:9.75:0,10,254	1/1:2,2:2:5.98:46,6,0
chr10	84638099	.	ACATGGGCTC	A	1543.95	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.021;DP=602;FS=6.153;HRun=0;HaplotypeScore=151.1296;InbreedingCoeff=0.9396;MQ=58.24;MQ0=5;MQRankSum=-7.280;QD=64.33;ReadPosRankSum=-0.731;VQSLOD=2.7736;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:57.15:1639,57,0	0/0:9,0:9:27.08:0,27,1130	0/0:31,0:12:36.10:0,36,1441	0/0:17,0:3:9.03:0,9,316	0/0:38,0:37:99:0,102,4897	0/0:21,0:20:63.22:0,63,2981	0/0:13,0:13:39.13:0,39,1878	0/0:28,0:28:75.21:0,75,3261	0/0:18,0:18:54.19:0,54,2646	0/0:20,0:20:60.21:0,60,2867	0/0:33,0:33:99:0,99,4558	0/0:14,0:14:42.14:0,42,2052	0/0:20,0:20:57.18:0,57,2575	0/0:8,0:8:24.08:0,24,1175	0/0:16,0:16:48.16:0,48,2274	0/0:14,0:14:39.12:0,39,1681	0/0:39,0:39:99:0,117,5380	0/0:31,0:31:87.30:0,87,4161	0/0:29,0:28:75.26:0,75,3509	0/0:20,0:20:57.20:0,57,2795	0/0:26,0:26:75.20:0,75,3236	0/0:10,0:10:27.09:0,27,1301	0/0:24,0:24:66.23:0,66,3133	0/0:18,0:18:54.19:0,54,2649	0/0:20,0:20:57.20:0,57,2679	0/0:27,0:27:78.27:0,78,3785	0/0:26,0:26:78.27:0,78,3773	0/0:8,0:8:24.08:0,24,1176
chr10	84640663	.	G	GATA	2462.09	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.105;DP=700;FS=4.869;HRun=0;HaplotypeScore=90.6876;InbreedingCoeff=0.9947;MQ=57.90;MQ0=13;MQRankSum=2.326;QD=49.24;ReadPosRankSum=1.179;VQSLOD=5.4555;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,47:50:99:2557,117,0	0/0:16,0:16:45.15:0,45,735	0/0:20,0:11:21.07:0,21,327	0/0:14,0:11:27.09:0,27,415	0/0:35,0:34:96.33:0,96,1549	0/0:34,0:33:93.32:0,93,1519	0/0:16,0:16:45.12:0,45,681	0/0:27,0:26:66.22:0,66,1073	0/0:27,0:27:75.26:0,75,1225	0/0:22,0:22:57.19:0,57,931	0/0:15,0:15:39.11:0,39,589	0/0:23,0:23:66.22:0,66,1066	0/0:28,0:28:75.26:0,75,1222	0/0:14,0:14:36.10:0,36,534	0/0:24,0:24:66.21:0,66,1050	0/0:19,0:19:51.17:0,51,833	0/0:22,0:22:63.17:0,63,1000	0/0:27,0:25:63.21:0,63,1029	0/0:25,0:24:69.19:0,69,1012	0/0:40,0:39:99:0,105,1710	0/0:23,0:23:66.23:0,66,1076	0/0:30,0:30:81.28:0,81,1321	0/0:32,0:32:90.29:0,90,1443	0/0:16,0:16:42.14:0,42,686	0/0:26,0:26:75.24:0,75,1200	0/0:26,0:26:72.25:0,72,1176	0/0:31,0:31:78.27:0,78,1270	0/0:18,0:18:54.14:0,54,808
chr10	84640930	.	G	GGA	1201.21	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.342;DP=736;FS=24.176;HRun=0;HaplotypeScore=101.7453;InbreedingCoeff=0.9618;MQ=60.08;MQ0=5;MQRankSum=-2.906;QD=28.60;ReadPosRankSum=1.315;VQSLOD=2.8837;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,31:40:76.79:1296,77,0	0/0:10,0:10:30.06:0,30,376	0/0:22,0:14:26.08:0,26,388	0/0:29,0:23:11.13:0,11,515	0/0:24,0:24:54.18:0,54,709	0/0:13,0:13:30.10:0,30,394	0/0:15,0:15:39.12:0,39,512	0/0:39,0:39:99:0,108,1381	0/0:31,0:31:87.26:0,87,1126	0/0:28,0:28:77.05:0,77,968	0/0:18,0:18:48.13:0,48,601	0/0:22,0:22:60.15:0,60,732	0/0:33,0:33:84.25:0,84,1074	0/0:44,0:44:99:0,123,1596	0/0:25,0:25:66.19:0,66,828	0/0:12,0:12:36.11:0,36,460	0/0:39,0:39:74.84:0,75,1148	0/0:22,0:22:60.11:0,60,749	0/0:24,0:23:60.14:0,60,731	0/0:34,0:34:99:0,102,1312	0/0:35,0:35:99:0,102,1297	0/0:27,0:27:75.24:0,75,983	0/0:22,0:22:53.91:0,54,681	0/0:26,0:26:69.20:0,69,879	0/0:18,0:18:51.16:0,51,657	0/0:36,0:36:99:0,99,1287	0/0:28,0:27:66.17:0,66,847	0/0:18,0:18:51.17:0,51,669
chr10	84640973	.	CT	C	250.66	PASS	AB=0.655;AC=1;AF=0.018;AN=56;BaseQRankSum=5.652;DP=829;FS=6.071;HRun=3;HaplotypeScore=87.2829;InbreedingCoeff=-0.0183;MQ=58.65;MQ0=4;MQRankSum=-5.671;QD=6.96;ReadPosRankSum=-0.859;VQSLOD=0.2074;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:17,19:35:99:325,0,340	0/0:7,0:7:21.07:0,21,302	0/0:42,0:20:51.13:0,51,694	0/0:43,0:24:66.17:0,66,896	0/0:25,0:25:75.25:0,75,1080	0/0:24,0:24:72.21:0,72,999	0/0:12,0:12:33.11:0,33,475	0/0:38,0:37:99:0,102,1420	0/0:33,0:33:96.31:0,96,1363	0/0:37,0:37:99:0,111,1554	0/0:23,0:23:63.21:0,63,906	0/0:23,0:23:69.22:0,69,977	0/0:31,0:31:90.30:0,90,1294	0/0:43,0:43:99:0,123,1756	0/0:31,0:31:93.31:0,93,1339	0/0:24,0:24:69.22:0,69,977	0/0:34,0:34:90.27:0,90,1271	0/0:25,0:25:75.22:0,75,1057	0/0:27,1:25:35.04:0,35,937	0/0:33,0:33:93.30:0,93,1321	0/0:37,0:36:99:0,105,1435	0/0:26,0:26:75.22:0,75,1058	0/0:25,0:25:72.24:0,72,1036	0/0:30,0:30:87.23:0,87,1211	0/0:23,0:23:66.19:0,66,913	0/0:39,0:39:99:0,108,1535	0/0:26,0:25:78.21:0,78,1064	0/0:31,0:31:93.26:0,93,1311
chr10	84641551	.	G	GAA	399.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.051;DP=551;FS=2.024;HRun=10;HaplotypeScore=76.9403;InbreedingCoeff=0.9193;MQ=66.78;MQ0=0;MQRankSum=-3.453;QD=18.18;ReadPosRankSum=-1.795;VQSLOD=2.2542;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,11:22:38.52:495,39,0	0/0:6,0:6:18.04:0,18,183	0/0:18,0:15:14.42:0,14,139	0/0:14,0:13:9.79:0,10,149	0/0:28,0:29:68.83:0,69,683	0/0:18,0:18:39.03:0,39,397	0/0:14,0:14:33.04:0,33,328	0/0:23,0:23:57.07:0,57,558	0/0:21,0:21:45.07:0,45,451	0/0:23,0:23:57.09:0,57,576	0/0:24,0:24:63.06:0,63,618	0/0:18,0:18:42.08:0,42,426	0/0:17,0:17:39.06:0,39,397	0/0:22,0:22:50.96:0,51,518	0/0:15,0:15:35.10:0,35,364	0/0:16,0:16:39.04:0,39,396	0/0:23,0:23:66.01:0,66,655	0/0:13,0:13:36.05:0,36,357	0/0:19,0:18:32.99:0,33,335	0/0:28,0:28:69.09:0,69,695	0/0:13,0:13:33.04:0,33,328	0/0:14,0:14:38.87:0,39,379	0/0:18,0:18:19.58:0,20,401	0/0:12,0:13:20.48:0,20,258	0/0:22,0:22:63.12:0,63,640	0/0:43,0:43:99:0,108,1098	0/0:26,0:28:56.50:0,57,599	0/0:15,0:15:36.04:0,36,366
chr10	84641573	.	TG	T	136.07	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.199;DP=536;FS=0.000;HRun=8;HaplotypeScore=63.6902;InbreedingCoeff=0.9841;MQ=69.60;MQ0=0;MQRankSum=-3.039;QD=9.72;ReadPosRankSum=-1.075;VQSLOD=1.3213;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:14:24.03:229,24,0	0/0:6,0:6:18.06:0,18,217	0/0:15,0:10:23.63:0,24,267	0/0:16,0:15:32.98:0,33,339	0/0:27,0:27:72.18:0,72,850	0/0:16,0:16:39.12:0,39,464	0/0:17,0:17:48.15:0,48,580	0/0:23,0:23:68.79:0,69,796	0/0:19,0:19:45.14:0,45,543	0/0:19,0:19:42.12:0,42,497	0/0:32,0:32:90.26:0,90,1074	0/0:17,0:17:42.12:0,42,495	0/0:15,0:15:45.13:0,45,533	0/0:23,0:23:60.18:0,60,724	0/0:18,0:18:51.13:0,51,593	0/0:16,0:16:42.13:0,42,507	0/0:21,0:21:45.14:0,45,544	0/0:11,0:11:27.08:0,27,325	0/0:13,0:13:39.12:0,39,467	0/0:26,0:26:38.21:0,38,727	0/0:17,0:17:39.12:0,39,471	0/0:16,0:16:42.07:0,42,460	0/0:18,0:18:39.12:0,39,471	0/0:11,0:11:24.07:0,24,290	0/0:26,0:26:66.20:0,66,797	0/0:42,0:42:99:0,109,1304	0/0:25,0:24:66.18:0,66,776	0/0:16,0:16:45.11:0,45,529
chr10	84641690	.	G	GTT	440.81	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.116;DP=618;FS=8.035;HRun=1;HaplotypeScore=76.6667;InbreedingCoeff=0.9988;MQ=91.78;MQ0=0;MQRankSum=-5.633;QD=31.49;ReadPosRankSum=-0.901;VQSLOD=2.7768;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:39.13:536,39,0	0/0:11,0:11:30.10:0,30,489	0/0:23,0:23:69.23:0,69,1088	0/0:29,0:29:87.16:0,87,1259	0/0:15,0:15:42.13:0,42,659	0/0:20,0:20:57.17:0,57,881	0/0:20,0:20:60.18:0,60,927	0/0:30,0:30:87.28:0,87,1373	0/0:25,0:25:75.24:0,75,1198	0/0:17,0:17:48.15:0,48,739	0/0:10,0:10:30.10:0,30,485	0/0:21,0:21:63.20:0,63,998	0/0:15,0:15:42.12:0,42,636	0/0:21,0:21:60.19:0,60,953	0/0:22,0:22:66.20:0,66,1028	0/0:20,0:20:60.16:0,60,905	0/0:25,0:25:75.24:0,75,1197	0/0:13,0:13:39.10:0,39,608	0/0:16,0:16:48.16:0,48,782	0/0:21,0:21:63.22:0,63,1025	0/0:55,0:55:99:0,153,2391	0/0:18,0:18:51.14:0,51,759	0/0:21,0:21:57.19:0,57,929	0/0:31,0:31:93.29:0,93,1464	0/0:20,0:20:60.18:0,60,929	0/0:36,0:36:99:0,105,1655	0/0:27,0:27:81.23:0,81,1239	0/0:22,0:22:66.19:0,66,1025
chr10	84641691	.	CGGAA	C	328.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.916;DP=623;FS=6.180;HRun=0;HaplotypeScore=102.6918;InbreedingCoeff=0.9990;MQ=92.62;MQ0=0;MQRankSum=-5.465;QD=25.30;ReadPosRankSum=-0.506;VQSLOD=2.7131;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,11:13:36.10:424,36,0	0/0:11,0:11:33.11:0,33,911	0/0:25,0:25:72.25:0,72,1993	0/0:29,0:29:87.26:0,87,2365	0/0:16,0:16:45.15:0,45,1264	0/0:20,0:20:60.21:0,60,1738	0/0:21,0:21:63.22:0,63,1777	0/0:29,0:29:87.30:0,87,2441	0/0:25,0:25:75.26:0,75,2163	0/0:16,0:16:48.16:0,48,1380	0/0:10,0:10:30.10:0,30,865	0/0:22,0:22:66.23:0,66,1857	0/0:15,0:15:45.15:0,45,1286	0/0:22,0:22:66.23:0,66,1845	0/0:23,0:23:69.24:0,69,1991	0/0:19,0:19:57.20:0,57,1651	0/0:25,0:25:75.26:0,75,2172	0/0:13,0:13:39.13:0,39,1114	0/0:16,0:16:48.16:0,48,1351	0/0:21,0:21:63.22:0,63,1814	0/0:55,0:55:99:0,163,4631	0/0:18,0:18:51.18:0,51,1474	0/0:21,0:21:60.21:0,60,1709	0/0:31,0:31:93.32:0,93,2581	0/0:20,0:20:60.21:0,60,1650	0/0:37,0:37:99:0,111,3151	0/0:27,0:27:81.28:0,81,2296	0/0:23,0:23:69.24:0,69,1942
chr10	84641696	.	C	CT	381.48	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.968;DP=640;FS=3.358;HRun=0;HaplotypeScore=67.6943;InbreedingCoeff=0.9643;MQ=91.83;MQ0=0;MQRankSum=-6.507;QD=19.07;ReadPosRankSum=-1.869;VQSLOD=5.1269;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,11:20:48.08:476,48,0	0/0:12,0:12:11.26:0,11,398	0/0:25,0:25:72.20:0,72,952	0/0:29,0:29:84.24:0,84,1137	0/0:17,0:17:48.15:0,48,654	0/0:22,0:22:60.20:0,60,839	0/0:23,0:23:66.19:0,66,886	0/0:27,0:27:78.24:0,78,1059	0/0:28,0:28:81.27:0,81,1131	0/0:17,0:17:48.16:0,48,663	0/0:10,0:10:30.10:0,30,419	0/0:25,0:25:72.24:0,72,1003	0/0:16,0:16:48.16:0,48,669	0/0:20,0:20:60.20:0,60,839	0/0:26,0:26:78.23:0,78,1051	0/0:21,0:21:63.18:0,63,846	0/0:26,0:26:75.23:0,75,1028	0/0:12,0:12:33.11:0,33,461	0/0:17,0:17:48.16:0,48,670	0/0:21,0:21:63.21:0,63,875	0/0:56,0:56:99:0,169,2325	0/0:18,0:18:51.17:0,51,713	0/0:21,0:21:60.20:0,60,835	0/0:27,0:27:81.27:0,81,1129	0/0:19,0:19:51.17:0,51,713	0/0:37,0:37:99:0,108,1510	0/0:25,0:24:69.23:0,69,957	0/0:23,0:23:66.22:0,66,915
chr10	84642111	.	G	GT	683.39	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.847;DP=860;FS=0.698;HRun=0;HaplotypeScore=103.3430;InbreedingCoeff=0.9988;MQ=68.27;MQ0=7;MQRankSum=-3.485;QD=18.47;ReadPosRankSum=-2.038;VQSLOD=4.6310;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,18:37:80.10:778,80,0	0/0:12,0:12:36.12:0,36,502	0/0:53,0:39:88.47:0,88,1313	0/0:57,0:42:99:0,99,1354	0/0:32,0:32:96.26:0,96,1240	0/0:24,0:24:69.21:0,69,929	0/0:38,0:38:99:0,102,1300	0/0:29,0:29:86.77:0,87,1071	0/0:38,0:38:99:0,114,1534	0/0:30,0:30:81.21:0,81,1043	0/0:19,0:19:57.17:0,57,761	0/0:27,0:27:75.25:0,75,1040	0/0:23,0:23:69.21:0,69,930	0/0:27,0:27:75.22:0,75,1011	0/0:43,0:43:99:0,123,1623	0/0:33,0:33:90.21:0,90,1184	0/0:33,0:33:93.24:0,93,1241	0/0:20,0:20:55.17:0,55,751	0/0:26,0:25:66.19:0,66,884	0/0:32,0:32:90.20:0,90,1187	0/0:66,0:66:99:0,165,2259	0/0:27,0:27:81.22:0,81,1059	0/0:31,0:31:87.26:0,87,1163	0/0:27,0:27:69.17:0,69,919	0/0:17,0:17:48.16:0,48,668	0/0:26,0:26:78.25:0,78,1067	0/0:23,0:23:51.16:0,51,692	0/0:9,0:9:27.09:0,27,374
chr10	84642176	.	A	ATG	6906.12	PASS	AB=0.640;AC=13;AF=0.232;AN=56;BaseQRankSum=-11.303;DP=946;FS=7.081;HRun=0;HaplotypeScore=130.6606;InbreedingCoeff=0.7271;MQ=54.97;MQ0=15;MQRankSum=1.497;QD=23.10;ReadPosRankSum=-2.262;VQSLOD=4.6024;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:38.95:0,39,247	0/0:14,0:17:41.63:0,42,447	0/0:69,0:32:47.29:0,47,466	0/0:46,0:19:13.15:0,13,219	0/0:27,0:27:60.18:0,60,726	0/0:29,0:29:27.71:0,28,299	0/1:18,28:46:3.92:456,0,4	1/1:22,26:47:32.26:935,32,0	0/0:35,0:35:60.02:0,60,847	0/0:28,0:29:78.08:0,78,936	0/0:25,0:27:59.85:0,60,691	0/0:28,0:28:55.82:0,56,779	0/0:22,0:22:57.16:0,57,684	0/0:31,0:32:78.08:0,78,935	0/0:39,0:41:99:0,105,1228	0/0:41,0:41:99:0,99,1199	0/0:39,0:39:76.23:0,76,1153	0/0:21,0:21:57.18:0,57,697	0/1:11,19:29:10.65:738,0,11	1/1:8,23:31:63.22:1027,63,0	1/1:20,54:73:48.10:1764,48,0	0/0:24,0:26:62.86:0,63,728	0/0:15,0:15:33.07:0,33,377	0/0:53,0:54:99:0,147,1764	0/0:19,0:18:27.71:0,28,305	0/1:18,15:31:16.44:924,0,16	1/1:3,29:32:46.09:915,46,0	1/1:1,3:4:9.03:147,9,0
chr10	84642181	.	TG	T	760.67	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.250;DP=948;FS=12.604;HRun=1;HaplotypeScore=135.7766;InbreedingCoeff=0.9447;MQ=54.53;MQ0=18;MQRankSum=-4.024;QD=26.23;ReadPosRankSum=-1.408;VQSLOD=1.9823;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:48.70:856,49,0	0/0:17,0:17:40.96:0,41,627	0/0:72,0:30:84.24:0,84,1231	0/0:52,0:20:47.22:0,47,628	0/0:28,0:28:81.26:0,81,1217	0/0:29,0:29:40.20:0,40,558	0/0:48,0:48:80.94:0,81,916	0/0:47,0:46:99:0,126,1429	0/0:37,0:37:99:0,100,1450	0/0:28,0:28:78.74:0,79,1239	0/0:23,0:23:64.14:0,64,966	0/0:26,0:26:76.14:0,76,1179	0/0:23,0:23:69.20:0,69,1043	0/0:31,0:31:90.78:0,91,1411	0/0:41,0:41:99:0,118,1809	0/0:38,0:38:99:0,108,1677	0/0:38,0:38:99:0,114,1749	0/0:22,0:22:66.11:0,66,987	0/0:31,0:30:87.09:0,87,937	0/0:30,0:30:83.94:0,84,780	0/0:71,0:70:99:0,150,1419	0/0:25,0:25:70.18:0,70,1077	0/0:15,0:15:45.13:0,45,665	0/0:56,0:56:99:0,157,2465	0/0:18,0:17:37.18:0,37,510	0/0:32,0:30:87:0,87,875	0/0:37,0:36:81.44:0,81,783	0/0:3,0:3:8.99:0,9,75
chr10	84642210	.	G	GTGTGTGTGTGTC	4738.44	PASS	AB=0.984;AC=11;AF=0.196;AN=56;BaseQRankSum=1.133;DP=910;FS=0.587;HRun=0;HaplotypeScore=295.2564;InbreedingCoeff=0.8590;MQ=57.70;MQ0=15;MQRankSum=-9.270;QD=25.48;ReadPosRankSum=-1.390;VQSLOD=3.0346;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:20.82:652,21,0	0/0:15,0:15:36.12:0,36,1153	0/0:58,0:29:22.94:0,23,368	0/1:60,0:23:34.50:35,0,193	0/0:20,0:20:45.15:0,45,1534	1/1:7,22:33:12.04:637,12,0	0/0:39,0:39:66.21:0,66,1983	0/0:36,0:36:66.15:0,66,1452	0/0:36,0:36:87.30:0,87,2985	0/0:29,0:29:51.16:0,51,1522	0/0:24,0:24:51.18:0,51,1566	0/0:36,0:36:65.88:0,66,2002	0/0:24,0:24:51.16:0,51,1565	0/0:27,0:27:51.16:0,51,1631	0/0:43,0:43:99:0,102,3165	0/0:42,0:42:81.18:0,81,2251	0/0:36,0:36:74.32:0,74,2353	0/0:18,0:18:13.09:0,13,849	0/0:26,0:26:33.17:0,33,1384	0/0:28,0:28:57.18:0,57,1657	0/0:61,0:61:84.23:0,84,2557	0/0:25,0:25:57.16:0,57,1689	0/0:18,0:18:45.14:0,45,1425	0/0:58,0:58:99:0,107,3658	1/1:6,17:24:24.08:1323,24,0	1/1:14,14:29:47.53:1716,48,0	0/0:25,0:24:57.18:0,57,1843	1/1:3,7:10:9.01:376,9,0
chr10	84642224	.	G	GTATGTGTGTC	3148.10	PASS	AB=0.991;AC=6;AF=0.107;AN=56;BaseQRankSum=7.358;DP=863;FS=5.154;HRun=0;HaplotypeScore=252.7545;InbreedingCoeff=0.2778;MQ=60.26;MQ0=15;MQRankSum=-8.959;QD=25.59;ReadPosRankSum=2.059;VQSLOD=2.3928;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,8:33:11.06:950,11,0	0/0:13,0:13:39.11:0,39,1214	0/0:54,0:29:70.34:0,70,1226	0/0:59,0:28:45.94:0,46,1035	0/0:27,0:27:75.17:0,75,1845	0/1:29,0:29:8.92:350,0,9	0/0:34,0:34:75.18:0,75,2207	0/0:41,0:41:99:0,123,2689	0/0:36,0:36:99:0,99,3087	0/0:28,0:27:75.22:0,75,1973	0/0:20,0:20:57.20:0,57,1856	0/0:28,0:28:84.12:0,84,2311	0/0:24,0:24:71.39:0,71,1962	0/0:24,0:24:72.20:0,72,1922	0/0:45,0:45:99:0,126,3698	0/0:39,0:39:99:0,103,2874	0/0:31,0:31:90.26:0,90,2647	0/0:17,0:17:43.84:0,44,996	0/0:23,0:22:66.22:0,66,1740	0/0:23,0:23:69.21:0,69,1958	0/0:53,0:53:81.92:0,82,3024	0/0:22,0:22:66.21:0,66,1996	0/0:20,0:20:60.17:0,60,1733	0/0:52,0:52:99:0,143,3987	0/1:24,0:23:42.76:746,0,43	0/1:27,0:28:99:1020,0,224	0/0:27,0:26:69.22:0,69,2100	0/1:9,0:9:13.50:209,0,14
chr10	84643511	.	G	GGAA	1137.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.825;DP=610;FS=1.757;HRun=0;HaplotypeScore=94.0556;InbreedingCoeff=0.9878;MQ=93.07;MQ0=0;MQRankSum=-7.642;QD=43.76;ReadPosRankSum=0.948;VQSLOD=5.3251;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:65.62:1233,66,0	0/0:7,0:7:21.07:0,21,391	0/0:29,0:29:74.97:0,75,1309	0/0:27,0:27:72.17:0,72,1227	0/0:23,0:23:69.21:0,69,1247	0/0:19,0:19:48.13:0,48,830	0/0:31,0:31:89.88:0,90,1598	0/0:32,0:32:90.29:0,90,1589	0/0:16,0:16:45.13:0,45,776	0/0:20,0:20:60.21:0,60,1112	0/0:16,0:16:45.09:0,45,706	0/0:11,0:11:33.11:0,33,615	0/0:20,0:20:60.21:0,60,1104	0/0:23,0:23:69.24:0,69,1280	0/0:30,0:30:87.30:0,87,1620	0/0:18,0:18:51.16:0,51,910	0/0:37,0:37:99:0,108,1978	0/0:20,0:20:54.09:0,54,933	0/0:14,0:14:42.12:0,42,721	0/0:26,0:26:78.20:0,78,1341	0/0:26,0:26:78.27:0,78,1445	0/0:22,0:22:66.21:0,66,1198	0/0:16,0:16:45.14:0,45,798	0/0:26,0:26:75.26:0,75,1377	0/0:23,0:23:66.20:0,66,1166	0/0:21,0:21:63.21:0,63,1145	0/0:25,0:25:75.26:0,75,1395	0/0:6,0:6:18.06:0,18,335
chr10	84643513	.	A	AAAC	1383.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.741;DP=618;FS=2.507;HRun=0;HaplotypeScore=93.8652;InbreedingCoeff=0.9877;MQ=93.73;MQ0=0;MQRankSum=-8.286;QD=44.62;ReadPosRankSum=-0.622;VQSLOD=4.8874;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,24:31:81.22:1478,81,0	0/0:7,0:7:21.07:0,21,392	0/0:30,0:30:86.95:0,87,1434	0/0:27,0:28:60.11:0,60,1127	0/0:23,0:23:69.24:0,69,1279	0/0:18,0:18:51.17:0,51,944	0/0:30,0:30:87.30:0,87,1614	0/0:33,0:33:96.31:0,96,1725	0/0:16,0:16:48.16:0,48,888	0/0:21,0:21:60.19:0,60,1084	0/0:14,0:14:39.13:0,39,727	0/0:12,0:12:33.11:0,33,615	0/0:20,0:20:60.20:0,60,1094	0/0:24,0:24:72.23:0,72,1311	0/0:30,0:30:90.31:0,90,1644	0/0:19,0:19:54.17:0,54,969	0/0:36,0:36:99:0,108,1991	0/0:20,0:20:51.17:0,51,951	0/0:14,0:14:42.14:0,42,757	0/0:26,0:26:75.26:0,75,1397	0/0:26,0:26:78.25:0,78,1423	0/0:22,0:22:66.23:0,66,1217	0/0:14,0:14:42.13:0,42,752	0/0:27,0:27:78.24:0,78,1411	0/0:23,0:23:69.24:0,69,1278	0/0:22,0:22:66.22:0,66,1201	0/0:26,0:26:78.25:0,78,1422	0/0:6,0:6:18.06:0,18,333
chr10	84643826	.	G	GT	2527.20	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.686;DP=549;FS=6.486;HRun=8;HaplotypeScore=58.3792;InbreedingCoeff=0.9913;MQ=72.78;MQ0=0;MQRankSum=-1.583;QD=26.05;ReadPosRankSum=3.419;VQSLOD=4.4545;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:44.78:769,45,0	0/0:6,0:6:18.01:0,18,165	0/0:23,0:23:50.71:0,51,438	0/0:10,0:10:18.86:0,19,156	0/0:21,0:21:60.02:0,60,545	1/1:3,9:12:27.08:312,27,0	0/0:18,0:18:45.02:0,45,412	0/0:27,0:27:59.96:0,60,541	0/0:15,0:15:36.02:0,36,329	0/0:21,0:21:57.02:0,57,518	0/0:21,0:21:45.01:0,45,412	0/0:14,0:14:36.01:0,36,329	0/0:17,0:17:51.03:0,51,467	0/0:24,0:24:60.01:0,60,543	0/0:31,0:31:87.02:0,87,787	0/0:15,0:15:36.02:0,36,330	0/0:22,0:22:57.03:0,57,521	0/0:21,0:21:53.99:0,54,493	0/0:19,0:19:50.98:0,51,456	0/0:29,0:29:75.01:0,75,681	0/0:19,0:19:51.02:0,51,467	0/0:19,0:19:48:0,48,435	0/0:20,0:20:57.03:0,57,522	0/0:17,0:17:48.03:0,48,439	1/1:1,20:22:60.01:672,60,0	1/1:2,21:23:14.27:672,14,0	0/0:23,0:23:66.03:0,66,604	1/1:0,12:12:23.54:276,24,0
chr10	84644506	.	CATT	C	1010.77	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.501;DP=538;FS=0.000;HRun=0;HaplotypeScore=88.4573;InbreedingCoeff=0.9982;MQ=78.06;MQ0=0;MQRankSum=-3.956;QD=40.43;ReadPosRankSum=0.707;VQSLOD=4.7278;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:63.22:1106,63,0	0/0:22,0:22:66.23:0,66,1556	0/0:19,0:19:45.15:0,45,1029	0/0:13,0:13:36.12:0,36,815	0/0:23,0:23:69.24:0,69,1628	0/0:19,0:19:54.19:0,54,1237	0/0:18,0:18:54.19:0,54,1250	0/0:31,0:31:93.32:0,93,2188	0/0:16,0:16:45.15:0,45,1062	0/0:24,0:24:69.23:0,69,1570	0/0:26,0:26:78.27:0,78,1819	0/0:20,0:20:60.19:0,60,1373	0/0:9,0:9:27.09:0,27,636	0/0:15,0:15:36.12:0,36,837	0/0:20,0:20:60.19:0,60,1373	0/0:11,0:11:33.11:0,33,777	0/0:17,0:17:51.17:0,51,1173	0/0:20,0:20:57.20:0,57,1295	0/0:13,0:13:39.12:0,39,864	0/0:21,0:21:60.21:0,60,1418	0/0:21,0:21:63.22:0,63,1441	0/0:29,0:29:87.30:0,87,2037	0/0:20,0:20:57.20:0,57,1297	0/0:12,0:12:36.06:0,36,727	0/0:21,0:21:63.22:0,63,1490	0/0:21,0:21:60.21:0,60,1386	0/0:17,0:17:48.16:0,48,1132	0/0:15,0:15:45.15:0,45,1064
chr10	84644559	.	CT	C	527.91	PASS	AB=0.821;AC=8;AF=0.143;AN=56;BaseQRankSum=1.866;DP=577;FS=2.623;HRun=12;HaplotypeScore=91.4240;InbreedingCoeff=0.1908;MQ=71.16;MQ0=1;MQRankSum=1.895;QD=4.03;ReadPosRankSum=1.276;VQSLOD=1.5937;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:6.58:0,7,66	0/0:20,1:21:18.85:0,19,372	0/0:27,0:23:5.91:0,6,264	0/1:19,1:12:11.44:11,0,54	0/1:25,3:29:6.57:7,0,485	0/1:5,11:17:5.46:223,0,5	0/0:17,0:17:39.35:0,39,208	0/0:21,0:21:34.04:0,34,168	0/0:15,1:17:21.51:0,22,377	0/0:30,0:31:67.01:0,67,666	0/0:25,0:26:65.86:0,66,615	0/0:15,0:15:39.06:0,39,386	0/1:4,1:5:8.12:8,0,107	0/1:13,6:19:47.84:48,0,290	0/0:14,0:14:30.06:0,30,304	0/0:18,0:18:42.08:0,42,426	0/1:14,2:16:1.37:1,0,350	0/0:27,1:28:18.92:0,19,523	0/0:11,0:12:12.32:0,12,72	0/0:26,0:26:57.79:0,58,321	0/0:11,0:11:25.64:0,26,137	0/0:21,2:24:10.43:0,10,432	0/0:28,0:29:71.94:0,72,692	0/0:21,0:22:56.95:0,57,562	1/1:7,16:24:48.86:360,49,0	0/0:9,0:23:40.17:0,40,281	0/0:20,0:20:46.18:0,46,291	0/0:14,0:20:41.56:0,42,241
chr10	84644569	.	T	TG	419.56	PASS	AB=0.942;AC=8;AF=0.143;AN=56;BaseQRankSum=-2.599;DP=575;FS=2.699;HRun=0;HaplotypeScore=92.3639;InbreedingCoeff=0.6844;MQ=64.88;MQ0=3;MQRankSum=3.920;QD=5.12;ReadPosRankSum=-3.509;VQSLOD=2.3461;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:46.60:0,47,322	0/0:17,0:17:51.01:0,51,618	0/0:25,0:19:44.43:0,44,515	0/0:25,1:15:15.43:0,15,111	0/0:29,0:29:83.41:0,83,963	0/0:18,0:18:45.88:0,46,356	1/1:18,0:18:1.26:79,1,0	1/1:17,1:18:23.24:200,23,0	0/0:17,0:17:47.09:0,47,591	0/0:31,0:30:87.11:0,87,1066	0/0:28,0:28:74.39:0,74,887	0/0:13,0:13:39.11:0,39,512	0/0:5,0:5:15:0,15,185	0/0:18,0:18:44.93:0,45,517	0/0:14,0:14:39.10:0,39,495	0/0:20,0:20:57.13:0,57,707	0/0:17,0:17:51.04:0,51,625	0/0:24,0:24:61.70:0,62,800	1/1:11,1:12:8.79:84,9,0	0/1:20,3:23:3.33:158,0,3	0/1:11,0:11:1.24:36,0,1	0/0:24,0:24:67.68:0,68,765	0/0:31,0:31:82.19:0,82,1005	0/0:22,0:22:55.87:0,56,773	0/0:26,0:25:63.47:0,63,408	0/0:21,0:21:50:0,50,421	0/0:18,0:18:0.69:0,1,54	0/0:25,0:24:61.37:0,61,460
chr10	84644574	.	TGTTG	T	398.21	PASS	AB=0.960;AC=3;AF=0.054;AN=56;BaseQRankSum=5.808;DP=559;FS=9.742;HRun=0;HaplotypeScore=114.3178;InbreedingCoeff=0.6125;MQ=62.12;MQ0=3;MQRankSum=-4.886;QD=8.47;ReadPosRankSum=-1.128;VQSLOD=1.9595;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,10:21:37.28:492,37,0	0/0:17,0:17:48.14:0,48,1210	0/1:23,0:14:6.84:7,0,520	0/0:20,0:13:3.84:0,4,202	0/0:28,0:28:78.25:0,78,2036	0/0:20,0:20:60.19:0,60,1345	0/0:23,0:23:69.24:0,69,1685	0/0:19,0:19:57.20:0,57,1548	0/0:15,0:15:45.15:0,45,1254	0/0:28,0:27:81.23:0,81,2007	0/0:26,0:26:74.88:0,75,1912	0/0:13,0:13:39.13:0,39,1061	0/0:5,0:5:15.05:0,15,416	0/0:18,0:18:51.18:0,51,1329	0/0:14,0:15:42.14:0,42,1068	0/0:20,0:20:57.20:0,57,1525	0/0:17,0:17:51.18:0,51,1359	0/0:25,0:25:75.26:0,75,2004	0/0:15,0:15:39.13:0,39,895	0/0:23,0:23:69.24:0,69,1927	0/0:11,0:11:33.11:0,33,887	0/0:22,0:22:66.21:0,66,1666	0/0:27,0:27:78.19:0,78,2025	0/0:23,0:23:69.24:0,69,1861	0/0:23,0:22:60.21:0,60,1429	0/0:21,0:21:54.18:0,54,1302	0/0:17,0:17:48.16:0,48,1366	0/0:21,0:20:34.35:0,34,1225
chr10	84644605	.	CG	C	327.26	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=5.354;DP=518;FS=2.430;HRun=2;HaplotypeScore=65.3340;InbreedingCoeff=0.5744;MQ=57.16;MQ0=6;MQRankSum=-3.621;QD=6.82;ReadPosRankSum=-1.544;VQSLOD=0.3406;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:16:33.11:420,33,0	0/0:11,0:11:30.10:0,30,448	0/1:20,0:5:5.92:6,0,28	0/1:10,0:6:0.35:0,0,63	0/0:27,0:27:81.27:0,81,1212	0/0:22,0:22:66.21:0,66,967	0/0:24,0:24:72.19:0,72,1033	0/0:30,0:29:81.26:0,81,1190	0/0:12,0:12:36.12:0,36,536	0/0:24,0:24:66.21:0,66,949	0/0:25,0:25:69.20:0,69,992	0/0:10,0:10:30.10:0,30,442	0/0:6,0:6:18.06:0,18,266	0/0:18,0:18:51.16:0,51,740	0/0:15,0:15:45.15:0,45,672	0/0:16,0:16:48.15:0,48,698	0/0:22,0:22:63.15:0,63,913	0/0:23,1:24:33.29:0,33,963	0/0:13,0:11:30.10:0,30,448	0/0:28,0:28:84.24:0,84,1223	0/0:16,0:15:42.13:0,42,608	0/0:18,0:18:54.18:0,54,806	0/0:20,0:20:57.19:0,57,850	0/0:23,0:23:69.23:0,69,1028	0/0:24,0:24:66.20:0,66,948	0/0:14,0:14:42.13:0,42,604	0/0:16,0:16:48.16:0,48,718	0/0:12,0:12:33.11:0,33,493
chr10	84644946	.	AT	A	6693.11	PASS	AB=0.919;AC=32;AF=0.571;AN=56;BaseQRankSum=5.683;DP=585;FS=16.080;HRun=11;HaplotypeScore=63.1292;InbreedingCoeff=0.8936;MQ=68.10;MQ0=0;MQRankSum=-0.448;QD=18.14;ReadPosRankSum=-1.822;VQSLOD=3.8388;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:64.30:0,64,414	1/1:2,13:15:35.95:295,36,0	0/1:12,1:13:0.22:0,0,192	0/1:9,1:10:10.53:11,0,62	0/0:29,2:31:31.90:0,32,743	1/1:1,14:15:29.97:246,30,0	1/1:3,13:17:43.98:350,44,0	1/1:6,19:25:50.92:419,51,0	0/0:16,0:16:36.07:0,36,370	1/1:3,24:28:73.94:597,74,0	1/1:2,22:24:68.42:565,68,0	0/0:18,0:18:54.14:0,54,576	0/0:12,0:12:33.05:0,33,340	0/0:16,2:18:20.47:0,20,423	0/0:23,0:23:54.19:0,54,595	1/1:1,14:15:35.85:296,36,0	1/1:2,25:27:62.93:517,63,0	0/0:14,1:15:19.28:0,19,393	1/1:3,24:27:71.68:586,72,0	1/1:7,29:36:80.86:665,81,0	1/1:4,17:21:41.94:345,42,0	0/0:20,0:20:51.13:0,51,543	0/0:17,0:20:47.78:0,48,471	0/0:9,0:9:21.05:0,21,224	1/1:4,20:23:50.93:419,51,0	1/1:1,30:31:89.88:736,90,0	1/1:3,23:27:55.96:449,56,0	1/1:6,8:14:23.97:197,24,0
chr10	84645596	.	AC	A	968.98	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.242;DP=579;FS=3.530;HRun=1;HaplotypeScore=61.6407;InbreedingCoeff=0.9927;MQ=57.30;MQ0=9;MQRankSum=-0.047;QD=31.26;ReadPosRankSum=0.799;VQSLOD=3.3234;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:30:81.17:1064,81,0	0/0:10,0:10:30.05:0,30,338	0/0:19,1:10:21.30:0,21,245	0/0:18,0:12:23.90:0,24,185	0/0:28,0:28:81.66:0,82,952	0/0:15,0:15:41.96:0,42,486	0/0:16,0:16:48.09:0,48,582	0/0:34,0:33:95.43:0,95,1079	0/0:17,0:17:51.05:0,51,586	0/0:16,0:16:45.10:0,45,508	0/0:17,0:17:48.14:0,48,588	0/0:12,0:12:36.05:0,36,431	0/0:19,0:19:56.16:0,56,603	0/0:14,0:14:41.98:0,42,484	0/0:18,0:18:54.05:0,54,614	0/0:23,0:23:66.11:0,66,775	0/0:39,0:39:99:0,99,1283	0/0:26,0:26:61.46:0,61,881	0/0:32,0:29:82.04:0,82,953	0/0:23,0:23:66.11:0,66,764	0/0:25,0:25:72.12:0,72,821	0/0:11,0:10:30.08:0,30,365	0/0:16,0:16:48.02:0,48,556	0/0:23,0:23:63.42:0,63,701	0/0:16,0:16:46.03:0,46,569	0/0:29,0:29:84.18:0,84,970	0/0:19,0:19:57.08:0,57,661	0/0:12,0:12:36.06:0,36,408
chr10	84646650	.	A	AT	1439.40	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.181;DP=576;FS=2.325;HRun=0;HaplotypeScore=59.6461;InbreedingCoeff=0.9442;MQ=69.33;MQ0=0;MQRankSum=-4.542;QD=35.99;ReadPosRankSum=0.640;VQSLOD=3.1807;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,37:40:96.33:1534,96,0	0/0:6,0:6:18.06:0,18,252	0/0:18,0:18:53.95:0,54,686	0/0:26,0:26:75.24:0,75,1027	0/0:8,0:8:24.08:0,24,335	0/0:25,0:25:75.25:0,75,1048	0/0:21,0:21:63.21:0,63,881	0/0:28,0:27:78.25:0,78,1061	0/0:26,0:26:78.24:0,78,1072	0/0:13,0:13:36.12:0,36,503	0/0:5,0:5:15.05:0,15,209	0/0:19,0:19:54.16:0,54,736	0/0:13,0:13:36.10:0,36,485	0/0:14,0:14:42.13:0,42,571	0/0:31,0:31:90.29:0,90,1241	0/0:15,0:15:45.15:0,45,628	0/0:34,0:34:99:0,99,1338	0/0:32,0:32:90.27:0,90,1234	0/0:16,0:16:45.15:0,45,629	0/0:15,0:15:42.09:0,42,533	0/0:56,0:56:99:0,166,2265	0/0:5,0:5:12.04:0,12,168	0/0:14,0:14:36.12:0,36,503	0/0:29,0:29:81.27:0,81,1133	0/0:14,0:14:42.14:0,42,586	0/0:8,0:8:23.99:0,24,279	0/0:28,0:28:81.25:0,81,1112	0/0:17,0:17:51.17:0,51,709
chr10	84647113	.	CCCTT	C	1891.52	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.354;DP=718;FS=1.373;HRun=0;HaplotypeScore=112.0900;InbreedingCoeff=0.9987;MQ=87.31;MQ0=0;MQRankSum=-4.991;QD=41.12;ReadPosRankSum=1.248;VQSLOD=4.1632;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,40:46:99:1986,105,0	0/0:14,0:14:39.13:0,39,1038	0/0:30,0:30:84.26:0,84,2022	0/0:25,0:25:63.21:0,63,1550	0/0:16,0:16:48.16:0,48,1249	0/0:12,0:12:33.11:0,33,875	0/0:27,0:27:72.23:0,72,1814	0/0:32,0:32:93.31:0,93,2382	0/0:28,0:28:78.27:0,78,2104	0/0:34,0:34:99:0,99,2542	0/0:11,0:11:30.10:0,30,806	0/0:26,0:26:78.27:0,78,2061	0/0:30,0:30:87.28:0,87,2246	0/0:38,0:38:99:0,111,2848	0/0:28,0:28:81.26:0,81,2094	0/0:19,0:19:54.19:0,54,1419	0/0:37,0:37:99:0,105,2742	0/0:32,0:32:90.27:0,90,2182	0/0:19,0:19:54.17:0,54,1277	0/0:24,0:24:72.25:0,72,1848	0/0:47,0:47:99:0,135,3441	0/0:22,0:22:63.22:0,63,1650	0/0:20,0:20:54.19:0,54,1421	0/0:31,0:31:84.29:0,84,2215	0/0:13,0:13:33.11:0,33,890	0/0:31,0:31:84.29:0,84,2222	0/0:13,0:13:36.12:0,36,971	0/0:13,0:13:39.13:0,39,977
chr10	84650299	.	TTGTGTGTGTGTGTGTGTG	T	2135.14	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.618;DP=604;FS=1.899;HRun=0;HaplotypeScore=246.6841;InbreedingCoeff=0.8564;MQ=54.89;MQ0=9;MQRankSum=-6.470;QD=19.59;ReadPosRankSum=0.001;VQSLOD=2.6265;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:30.10:0,30,1957	0/0:9,0:11:18.06:0,18,1333	0/0:25,0:13:2.98:0,3,97	0/0:26,0:15:12.04:0,12,505	0/0:16,0:19:27.06:0,27,1556	0/0:14,0:14:9.03:0,9,518	0/0:19,0:30:48.16:0,48,3024	1/1:25,0:23:5.98:71,6,0	0/0:12,0:12:36.12:0,36,2353	0/0:26,0:27:49.05:0,49,2744	0/0:21,0:23:33.11:0,33,2068	0/0:20,0:22:45.15:0,45,3032	0/0:7,0:8:15.05:0,15,853	0/0:13,0:15:30.10:0,30,2129	0/0:15,0:17:24.08:0,24,1394	0/0:13,0:16:36.12:0,36,2555	0/0:38,0:45:99:0,107,7432	0/0:19,0:21:42.13:0,42,2999	1/1:15,4:18:11.95:312,12,0	1/1:9,10:20:20.90:486,21,0	1/1:21,6:28:3.01:126,3,0	0/0:18,0:17:42.14:0,42,2545	0/0:13,0:13:33.11:0,33,2088	0/0:40,0:42:98.88:0,99,6457	0/0:10,0:16:21.07:0,21,956	0/0:19,0:24:48.16:0,48,2136	1/1:4,10:15:27.09:1298,27,0	0/0:10,0:13:24.08:0,24,1035
chr10	84650686	.	CTTCCTTCT	C	1560.93	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=9.551;DP=669;FS=14.413;HRun=0;HaplotypeScore=166.1396;InbreedingCoeff=0.5069;MQ=59.60;MQ0=3;MQRankSum=-9.477;QD=21.98;ReadPosRankSum=-0.767;VQSLOD=2.4530;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:48.06:1085,48,0	0/0:10,0:10:27.09:0,27,1043	0/0:29,0:21:42.10:0,42,1115	0/0:21,0:16:21.52:0,22,744	0/0:25,0:25:54.18:0,54,1991	0/1:24,0:24:54.97:377,0,55	0/0:25,0:25:63.13:0,63,2360	0/0:24,0:24:45.13:0,45,1489	0/0:29,0:29:72.25:0,72,2789	0/0:29,0:29:78.24:0,78,2668	0/0:30,0:30:75.25:0,75,2701	0/0:15,0:15:36.11:0,36,1295	0/0:19,0:19:45.15:0,45,1747	0/0:21,0:21:54.17:0,54,1965	0/0:24,0:24:66.21:0,66,2489	0/0:23,0:23:54.17:0,54,2048	0/0:28,0:28:63.18:0,63,2323	0/0:24,0:24:68.90:0,69,2471	0/0:28,0:27:57.16:0,57,1666	0/0:31,0:31:75.21:0,75,2854	0/0:25,0:25:60.20:0,60,2137	0/0:31,0:31:78.24:0,78,2939	0/0:30,0:30:78.26:0,78,2833	0/0:15,0:15:39.13:0,39,1571	0/1:22,0:20:8.27:215,0,8	0/0:23,0:23:57.20:0,57,2170	0/0:28,0:28:69.22:0,69,2775	0/0:10,0:10:17.41:0,17,482
chr10	84650702	.	TTTCCTTCATTTA	T	2108.96	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.127;DP=651;FS=8.021;HRun=0;HaplotypeScore=208.1057;InbreedingCoeff=0.9765;MQ=56.81;MQ0=3;MQRankSum=-8.117;QD=49.05;ReadPosRankSum=1.872;VQSLOD=2.6317;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:15.24:0,15,662	0/0:10,0:10:30.09:0,30,1566	0/0:31,0:20:40.29:0,40,1180	0/0:23,0:15:16.05:0,16,926	0/0:23,0:23:60.21:0,60,2980	1/1:2,21:23:39.13:1405,39,0	0/0:28,0:28:75.26:0,75,3770	0/0:22,0:22:57.17:0,57,1975	0/0:26,0:26:78.25:0,78,4103	0/0:31,0:31:84.28:0,84,3858	0/0:29,0:29:75.24:0,75,3962	0/0:16,0:16:42.13:0,42,2037	0/0:17,0:17:48.16:0,48,2494	0/0:20,0:20:54.17:0,54,2568	0/0:25,0:25:66.21:0,66,3382	0/0:22,0:22:60.16:0,60,2721	0/0:26,0:26:72.22:0,72,3808	0/0:26,0:26:65.38:0,65,3376	0/0:23,0:22:48.14:0,48,1971	0/0:31,0:31:90.31:0,90,4756	0/0:23,0:23:60.02:0,60,2695	0/0:27,0:27:75.26:0,75,4056	0/0:29,0:29:81.28:0,81,4142	0/0:17,0:17:48.16:0,48,2504	1/1:1,19:18:24.08:825,24,0	0/0:23,0:23:63.21:0,63,2834	0/0:27,0:27:78.25:0,78,3664	0/0:6,0:6:15.03:0,15,575
chr10	84651163	.	AAGGAAGTC	A	604.64	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=4.785;DP=724;FS=2.931;HRun=0;HaplotypeScore=179.3285;InbreedingCoeff=0.8495;MQ=53.49;MQ0=17;MQRankSum=-4.754;QD=23.26;ReadPosRankSum=-0.847;VQSLOD=3.0867;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:15:27.09:698,27,0	0/0:16,0:16:45.15:0,45,1980	./.	0/0:13,0:1:3.01:0,3,132	0/0:19,0:18:51.18:0,51,2176	0/0:24,0:24:66.23:0,66,2832	0/0:25,0:24:63.22:0,63,2727	0/0:20,0:18:54.15:0,54,1918	0/0:30,0:30:87.30:0,87,3737	0/0:37,0:35:93.32:0,93,3961	0/0:20,0:20:54.17:0,54,2127	0/0:24,0:24:65.92:0,66,2859	0/0:32,0:32:90.31:0,90,3912	0/0:23,0:23:54.19:0,54,2365	0/0:29,0:29:84.29:0,84,3694	0/0:36,0:36:99:0,102,4409	0/0:25,0:25:69.24:0,69,2800	0/0:36,0:35:96.30:0,96,4086	0/0:17,0:12:33.11:0,33,1444	0/0:37,0:37:99:0,99,4112	0/0:44,0:44:90.31:0,90,3920	0/0:29,0:29:75.26:0,75,3161	0/0:21,0:21:54.18:0,54,2110	0/0:31,0:31:84.29:0,84,3446	0/0:26,0:26:66.23:0,66,2836	0/0:35,0:34:99:0,99,4219	0/0:21,0:21:51.13:0,51,2122	0/0:15,0:14:42.14:0,42,1832
chr10	84652197	.	TGGTTC	T	597.21	PASS	AB=0.840;AC=8;AF=0.143;AN=56;BaseQRankSum=0.995;DP=441;FS=32.078;HRun=0;HaplotypeScore=88.5801;InbreedingCoeff=-0.0406;MQ=43.57;MQ0=16;MQRankSum=-0.418;QD=5.97;ReadPosRankSum=-3.276;VQSLOD=-0.3823;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:9.30:0,9,405	0/1:4,0:7:99:138,0,158	0/1:8,0:4:2.58:27,0,3	0/1:7,0:4:1.79:2,0,4	0/0:20,0:20:46.37:0,46,968	0/0:26,0:25:38.50:0,38,1296	0/1:14,0:12:28.58:29,0,184	0/0:22,0:21:39.59:0,40,1166	0/0:17,0:17:35.15:0,35,640	0/1:13,1:15:99:308,0,299	0/1:4,5:8:40.90:182,0,41	0/0:9,0:9:23.86:0,24,576	0/0:8,0:8:20.97:0,21,343	0/0:14,0:14:5.45:0,5,446	0/0:26,0:26:32.23:0,32,1275	0/1:8,5:12:29.21:29,0,441	0/0:15,0:14:13.88:0,14,604	0/0:18,0:15:4.50:0,4,581	0/0:18,0:17:47.45:0,47,813	0/0:17,0:15:36.17:0,36,799	0/0:12,0:11:33.10:0,33,613	0/0:11,0:11:27.04:0,27,496	0/0:8,0:8:17.60:0,18,286	0/1:21,0:21:11.55:12,0,517	0/0:12,0:12:21.07:0,21,478	0/0:28,1:27:31.34:0,31,1452	0/0:19,0:18:32.26:0,32,958	0/0:9,0:6:18.02:0,18,300
chr10	84652211	.	TC	T	331.72	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=5.227;DP=355;FS=8.581;HRun=2;HaplotypeScore=44.9180;InbreedingCoeff=0.6677;MQ=41.26;MQ0=18;MQRankSum=-3.669;QD=11.44;ReadPosRankSum=1.802;VQSLOD=1.3417;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,23:27:36.11:425,36,0	0/0:4,0:2:3.01:0,3,41	./.	./.	0/0:20,0:19:36.03:0,36,471	0/0:21,0:20:42.13:0,42,561	0/0:16,0:14:18.03:0,18,227	0/0:20,0:19:44.95:0,45,524	0/0:15,0:15:29.81:0,30,285	0/0:8,0:6:17.60:0,18,184	0/0:6,0:4:8.86:0,9,75	0/0:12,0:12:36.07:0,36,430	0/0:9,0:9:18.04:0,18,214	0/0:12,0:12:24.02:0,24,263	0/0:21,0:21:48.09:0,48,583	0/0:11,0:10:24.08:0,24,331	0/0:13,0:12:17.22:0,17,362	0/0:19,0:16:35.98:0,36,416	0/0:12,0:12:27.02:0,27,315	0/0:13,0:12:33.04:0,33,432	0/0:8,0:7:15:0,15,172	0/0:8,0:7:11.74:0,12,112	0/0:7,0:7:6.01:0,6,68	0/0:13,0:13:15.05:0,15,207	0/0:9,0:9:14.93:0,15,162	0/0:26,0:23:65.47:0,65,775	0/0:12,0:11:30.07:0,30,390	0/0:8,0:5:15.05:0,15,208
chr10	84652975	.	AT	A	925.62	PASS	AB=0.757;AC=25;AF=0.446;AN=56;BaseQRankSum=4.196;DP=293;FS=1.629;HRun=13;HaplotypeScore=45.7333;InbreedingCoeff=0.4415;MQ=61.97;MQ0=14;MQRankSum=-0.152;QD=5.35;ReadPosRankSum=1.218;VQSLOD=1.3335;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:20:25.13:77,25,0	1/1:1,4:5:11.92:87,12,0	0/0:11,0:10:2.32:0,2,51	0/1:12,0:11:4.17:4,0,23	0/0:16,0:16:23.86:0,24,188	0/0:13,0:11:26.91:0,27,237	1/1:2,0:8:8.15:24,8,0	1/1:7,9:15:7.98:155,8,0	0/0:8,0:6:9:0,9,82	0/1:6,1:9:12.39:12,0,69	0/1:8,5:12:21.11:70,0,21	0/0:6,0:5:12.01:0,12,112	0/0:4,0:3:8.95:0,9,76	0/0:7,0:7:17.99:0,18,157	0/0:11,0:10:21.03:0,21,204	0/1:1,6:7:4.63:73,0,5	1/1:4,15:18:37.60:267,38,0	0/0:21,1:22:29.11:0,29,428	1/1:1,6:8:19.81:128,20,0	0/1:8,4:12:30.16:51,0,30	1/1:0,3:3:5.97:44,6,0	1/1:1,1:1:2.98:22,3,0	0/0:7,0:7:5.76:0,6,48	0/0:6,0:6:16.58:0,17,150	0/0:9,0:9:14.91:0,15,128	0/1:12,0:13:0.86:1,0,18	1/1:6,7:12:11.81:87,12,0	0/1:5,0:10:10.07:12,0,10
chr10	84653132	.	TTA	T	396.27	PASS	AB=0.742;AC=4;AF=0.074;AN=54;BaseQRankSum=6.102;DP=426;FS=10.531;HRun=0;HaplotypeScore=63.4409;InbreedingCoeff=0.4152;MQ=60.02;MQ0=6;MQRankSum=-4.707;QD=12.38;ReadPosRankSum=-0.208;VQSLOD=2.3388;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:5,4:9:99:161,0,275	0/0:4,0:4:12.04:0,12,244	0/0:12,1:8:21.07:0,21,386	0/0:31,0:21:47.08:0,47,904	0/0:6,0:6:18.06:0,18,332	0/0:12,0:12:36.12:0,36,732	0/0:23,0:23:69.24:0,69,1391	0/0:43,0:34:99:0,99,1927	0/0:13,0:11:33.11:0,33,652	0/0:15,0:15:45.15:0,45,915	0/0:5,0:5:15.05:0,15,303	0/0:14,0:13:36.12:0,36,714	0/0:12,0:11:33.11:0,33,669	0/0:15,0:15:45.15:0,45,880	0/0:16,0:14:36.12:0,36,730	0/0:11,0:11:33.11:0,33,654	0/0:26,0:25:75.26:0,75,1512	0/0:34,0:34:99:0,102,2015	0/0:22,0:22:65.81:0,66,1242	0/0:6,0:6:18.06:0,18,270	0/0:15,0:15:42.12:0,42,812	./.	0/0:9,0:9:27.09:0,27,548	0/0:30,0:30:90.31:0,90,1803	0/0:7,0:7:21.07:0,21,427	0/1:14,5:14:99:159,0,426	0/0:12,0:11:18.06:0,18,366	1/1:0,4:4:12.04:186,12,0
chr10	84653156	.	CG	C	506.58	PASS	AB=0.691;AC=4;AF=0.071;AN=56;BaseQRankSum=7.006;DP=406;FS=1.927;HRun=1;HaplotypeScore=57.7137;InbreedingCoeff=0.3794;MQ=73.84;MQ0=3;MQRankSum=-4.257;QD=14.90;ReadPosRankSum=1.367;VQSLOD=3.3958;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:5,7:12:99:171,0,119	0/0:3,0:3:9.03:0,9,144	0/0:23,0:19:54.12:0,54,833	0/0:31,0:23:57.98:0,58,868	0/0:8,0:8:18.04:0,18,262	0/0:13,0:13:36.12:0,36,575	0/0:20,0:20:60.12:0,60,906	0/0:28,0:24:65.79:0,66,991	0/0:9,0:9:24.08:0,24,383	0/0:18,0:18:54.15:0,54,830	0/0:5,0:5:15.05:0,15,235	0/0:14,0:14:42.14:0,42,670	0/0:12,0:12:36.11:0,36,545	0/0:15,0:15:45.15:0,45,719	0/0:13,0:13:36.12:0,36,574	0/0:13,0:13:39.13:0,39,616	0/0:27,0:27:81.25:0,81,1268	0/0:31,0:31:90.31:0,90,1426	0/0:25,0:25:72.23:0,72,1116	0/0:4,0:4:12.04:0,12,190	0/0:8,0:8:18.05:0,18,287	0/0:1,0:1:2.99:0,3,24	0/0:6,0:6:18.06:0,18,287	0/0:26,0:26:78.27:0,78,1246	0/0:8,0:8:21.07:0,21,335	0/1:10,5:15:99:181,0,293	0/0:11,0:11:15.03:0,15,215	1/1:0,7:7:21.07:269,21,0
chr10	84653158	.	CT	C	564.18	PASS	AB=0.900;AC=4;AF=0.071;AN=56;BaseQRankSum=7.252;DP=411;FS=4.314;HRun=1;HaplotypeScore=58.7254;InbreedingCoeff=0.3801;MQ=74.05;MQ0=2;MQRankSum=-3.910;QD=15.67;ReadPosRankSum=0.798;VQSLOD=3.5719;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:99:187,0,117	0/0:3,0:3:9.03:0,9,144	0/0:23,0:21:60.17:0,60,886	0/0:29,0:24:53.47:0,53,859	0/0:8,0:8:18.06:0,18,287	0/0:13,0:13:36.12:0,36,573	0/0:21,0:21:63.21:0,63,1004	0/0:28,0:24:66.20:0,66,973	0/0:11,0:11:30.09:0,30,453	0/0:18,0:18:54.18:0,54,843	0/0:6,0:6:15.05:0,15,238	0/0:14,0:14:42.14:0,42,668	0/0:12,0:12:36.12:0,36,573	0/0:15,0:15:45.15:0,45,720	0/0:14,0:14:42.14:0,42,663	0/0:12,0:12:36.12:0,36,574	0/0:28,0:28:84.27:0,84,1304	0/0:30,0:30:90.31:0,90,1439	0/0:25,0:25:75.18:0,75,1126	0/0:4,0:4:12.04:0,12,191	0/0:9,0:9:21.01:0,21,286	0/0:1,0:1:3.01:0,3,33	0/0:6,0:6:18.06:0,18,288	0/0:26,0:26:78.27:0,78,1242	0/0:8,0:8:21.07:0,21,336	0/1:12,4:16:99:217,0,293	0/0:11,0:11:15.05:0,15,223	1/1:7,0:7:21.07:275,21,0
chr10	84653169	.	T	TA	274	PASS	AB=0.939;AC=5;AF=0.089;AN=56;BaseQRankSum=6.145;DP=460;FS=8.868;HRun=0;HaplotypeScore=64.2612;InbreedingCoeff=-0.0925;MQ=69.77;MQ0=0;MQRankSum=-5.917;QD=2.80;ReadPosRankSum=-1.722;VQSLOD=1.3050;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:53.97:0,54,631	0/0:3,0:3:9.03:0,9,126	0/0:21,0:19:52.70:0,53,726	0/0:22,0:19:36.50:0,37,640	0/0:9,0:9:27.09:0,27,376	0/0:13,0:13:36.12:0,36,503	0/0:22,0:22:63.20:0,63,861	0/1:24,2:23:99:103,0,478	0/0:10,0:10:27.09:0,27,378	0/0:21,0:21:60.20:0,60,825	0/0:4,0:4:12.04:0,12,168	0/0:14,0:14:42.14:0,42,587	0/0:11,0:11:33.11:0,33,460	0/0:18,0:18:51.17:0,51,713	0/0:19,0:19:57.16:0,57,748	0/0:15,0:15:45.14:0,45,612	0/0:26,0:25:78.25:0,78,1074	0/0:32,0:32:96.28:0,96,1304	0/1:25,0:25:99:209,0,306	0/1:16,0:16:1.03:1,0,420	0/1:5,0:5:40.56:41,0,61	0/0:10,0:10:30.10:0,30,412	0/0:8,0:8:24.08:0,24,335	0/0:26,0:26:72.19:0,72,967	0/0:12,0:12:30.09:0,30,405	0/0:18,0:18:48.14:0,48,644	0/1:18,8:26:30.41:30,0,672	0/0:9,0:9:27.07:0,27,359
chr10	84654974	.	AAGAG	A	2189.61	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.730;DP=644;FS=0.000;HRun=0;HaplotypeScore=128.8143;InbreedingCoeff=0.9768;MQ=62.83;MQ0=6;MQRankSum=-7.038;QD=42.11;ReadPosRankSum=2.315;VQSLOD=4.1673;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,20:31:58.69:1186,59,0	0/0:10,0:10:21.06:0,21,500	0/0:43,0:22:43.60:0,44,825	0/0:65,0:32:32.41:0,32,696	0/0:21,0:21:60.19:0,60,1489	0/0:21,0:21:60.19:0,60,1471	0/0:29,0:29:41.67:0,42,1117	0/0:36,0:35:93.29:0,93,1997	0/0:16,0:16:45.14:0,45,1056	0/0:22,0:22:66.22:0,66,1656	0/0:18,0:18:51.17:0,51,1301	0/0:11,0:11:33.10:0,33,764	0/0:11,0:11:33.10:0,33,795	0/0:12,0:12:30.08:0,30,675	0/0:23,0:23:69.22:0,69,1723	0/0:12,0:12:33.11:0,33,805	0/0:36,0:37:80.46:0,80,2085	0/0:29,0:29:82.59:0,83,1800	0/0:25,0:24:66.19:0,66,1428	0/0:22,0:22:60.19:0,60,1479	0/0:18,0:18:51.17:0,51,1277	0/0:19,0:19:57.18:0,57,1403	0/0:23,0:23:69.24:0,69,1793	0/0:35,0:36:95.30:0,95,2029	0/0:15,0:15:39.12:0,39,973	1/1:0,18:18:54.18:976,54,0	0/0:17,0:16:42.13:0,42,1035	1/1:0,3:3:9.03:165,9,0
chr10	84655008	.	AAGAG	A	590.72	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=5.313;DP=679;FS=0.000;HRun=0;HaplotypeScore=148.7136;InbreedingCoeff=0.6496;MQ=65.30;MQ0=12;MQRankSum=-3.309;QD=21.10;ReadPosRankSum=-1.382;VQSLOD=2.8622;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:17.97:0,18,916	0/0:8,0:8:21.06:0,21,461	0/0:49,2:18:38.10:0,38,829	0/0:95,0:37:43.53:0,44,1067	0/0:28,0:28:84.27:0,84,2062	0/0:15,0:15:42.14:0,42,1065	1/1:3,20:23:36.12:680,36,0	0/0:29,0:29:84.27:0,84,1998	0/0:19,0:19:57.19:0,57,1438	0/0:30,0:30:90.30:0,90,2262	0/0:22,0:22:60.19:0,60,1486	0/0:14,0:14:39.13:0,39,1015	0/0:18,0:18:51.16:0,51,1190	0/0:12,0:12:36.11:0,36,909	0/0:24,0:24:69.21:0,69,1714	0/0:14,0:14:36.12:0,36,964	0/0:28,0:29:40.93:0,41,1788	0/0:29,0:29:81.07:0,81,2058	0/0:22,0:22:54.19:0,54,1382	0/0:21,0:21:63.22:0,63,1625	0/0:14,0:14:36.12:0,36,963	0/0:18,0:18:51.16:0,51,1265	0/0:25,0:25:72.23:0,72,1835	0/0:26,0:26:35.18:0,35,1676	0/0:13,0:13:39.12:0,39,974	0/0:22,0:22:54.47:0,54,964	0/0:22,0:21:66.23:0,66,1715	0/1:5,0:5:14.68:15,0,154
chr10	84655010	.	G	GAGAGAA	3442.66	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.542;DP=673;FS=2.526;HRun=0;HaplotypeScore=162.4469;InbreedingCoeff=0.9814;MQ=64.77;MQ0=12;MQRankSum=-9.204;QD=61.48;ReadPosRankSum=-1.535;VQSLOD=3.3583;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,16:30:63.70:1768,64,0	0/0:8,0:8:15.05:0,15,295	0/0:51,0:17:29.96:0,30,530	0/0:91,0:36:33.75:0,34,728	0/0:29,0:29:72.22:0,72,1479	0/0:14,0:14:33.10:0,33,680	0/0:22,0:22:36.07:0,36,473	0/0:29,0:29:66.23:0,66,1374	0/0:19,0:19:57.19:0,57,1169	0/0:31,0:31:84.27:0,84,1721	0/0:22,0:22:51.18:0,51,1128	0/0:14,0:14:39.12:0,39,833	0/0:18,0:18:42.10:0,42,860	0/0:12,0:12:33.11:0,33,741	0/0:23,0:23:60.21:0,60,1324	0/0:15,0:15:39.12:0,39,832	0/0:28,0:28:52.98:0,53,1397	0/0:28,0:29:59.77:0,60,1603	0/0:23,0:23:51.17:0,51,1103	0/0:21,0:21:57.20:0,57,1251	0/0:14,0:14:36.12:0,36,752	0/0:17,0:17:45.15:0,45,987	0/0:26,0:26:69.22:0,69,1419	0/0:22,0:24:21.77:0,22,1268	0/0:13,0:13:36.12:0,36,785	1/1:8,13:21:51.08:1348,51,0	0/0:22,0:21:63.22:0,63,1369	1/1:3,2:5:12.04:327,12,0
chr10	84655036	.	A	AG	4409.11	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-9.916;DP=676;FS=14.225;HRun=1;HaplotypeScore=96.1919;InbreedingCoeff=0.9853;MQ=67.79;MQ0=6;MQRankSum=1.665;QD=40.08;ReadPosRankSum=1.198;VQSLOD=3.6586;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:53.49:0,53,603	1/1:0,6:6:12.04:180,12,0	0/0:62,0:19:35.14:0,35,353	0/0:78,0:33:31.76:0,32,372	0/0:28,0:28:84.22:0,84,1032	0/0:13,0:13:39.11:0,39,492	0/0:23,0:22:51.12:0,51,641	0/0:33,0:33:93.28:0,93,1171	0/0:19,0:19:54.15:0,54,670	1/1:1,36:36:99:1607,108,0	1/1:2,20:22:57.11:816,57,0	0/0:17,0:17:51.14:0,51,632	0/0:14,0:14:42.14:0,42,544	0/0:12,0:12:36.09:0,36,441	0/0:24,0:24:69.21:0,69,882	1/1:0,17:17:48.16:712,48,0	1/1:5,23:28:62.88:1095,63,0	0/0:33,0:33:88.64:0,89,1129	0/0:21,0:20:51.17:0,51,661	0/0:24,0:24:72.23:0,72,934	0/0:15,0:15:32.08:0,32,433	0/0:19,0:19:57.15:0,57,700	0/0:23,0:23:66.20:0,66,832	0/0:21,0:21:55.97:0,56,724	0/0:15,0:15:36.12:0,36,466	0/0:22,0:22:60.14:0,60,744	0/0:22,0:21:66.15:0,66,809	0/0:5,0:5:11.99:0,12,129
chr10	84655197	.	A	AAGAGAGAAAGAG	3888.43	PASS	AB=0.821;AC=5;AF=0.089;AN=56;BaseQRankSum=4.511;DP=603;FS=0.000;HRun=0;HaplotypeScore=204.8462;InbreedingCoeff=0.6617;MQ=66.07;MQ0=9;MQRankSum=-5.991;QD=68.22;ReadPosRankSum=-1.709;VQSLOD=2.6440;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,1:19:32.79:796,33,0	0/0:6,0:6:18.06:0,18,668	0/0:47,0:20:19.77:0,20,519	0/0:62,0:34:3.21:0,3,411	0/0:18,0:18:54.16:0,54,1642	0/0:11,0:11:33.07:0,33,860	0/0:17,0:17:48.13:0,48,1277	0/0:27,0:27:75.01:0,75,1627	0/0:11,0:11:33.02:0,33,1039	0/0:29,0:29:87.25:0,87,2751	0/0:18,0:18:51.08:0,51,1276	0/0:14,0:14:39.11:0,39,1123	0/0:13,0:13:39.11:0,39,1099	0/0:11,0:11:33.08:0,33,864	0/0:23,0:23:66.18:0,66,1923	0/0:18,0:18:48.13:0,48,1384	0/0:28,0:27:77.85:0,78,1617	0/0:31,0:31:28.02:0,28,2299	0/0:10,0:10:24.02:0,24,493	0/0:22,0:22:63.10:0,63,1554	0/0:26,0:26:72.09:0,72,1789	0/0:22,0:22:66.14:0,66,1898	0/0:12,0:12:33.10:0,33,1017	0/0:20,0:20:3.96:0,4,1202	0/0:19,0:19:48.92:0,49,1393	0/1:25,6:32:26.71:2788,0,27	0/0:27,0:27:81.21:0,81,2374	1/1:5,1:6:11.99:304,12,0
chr10	84655240	.	C	CAT	2170.30	PASS	AB=0.591;AC=5;AF=0.089;AN=56;BaseQRankSum=5.695;DP=590;FS=0.000;HRun=0;HaplotypeScore=97.0660;InbreedingCoeff=0.7785;MQ=73.26;MQ0=3;MQRankSum=-5.700;QD=43.41;ReadPosRankSum=2.776;VQSLOD=5.3798;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:16:39.13:749,39,0	0/0:8,0:8:24.06:0,24,345	0/0:40,0:30:67.97:0,68,842	0/0:56,0:43:54.32:0,54,720	0/0:20,0:20:51.13:0,51,717	0/0:11,0:11:33.11:0,33,505	0/0:26,0:26:69.09:0,69,1017	0/0:19,0:19:54.18:0,54,825	0/0:17,0:17:51.16:0,51,759	0/0:33,0:33:90.29:0,90,1343	0/0:21,0:21:57.18:0,57,847	0/0:16,0:16:48.15:0,48,713	0/0:14,0:14:42.13:0,42,619	0/0:17,0:17:48.11:0,48,688	0/0:20,0:20:57.19:0,57,871	0/0:20,0:20:57.19:0,57,871	0/0:24,0:24:69.12:0,69,1005	0/0:22,0:22:60.20:0,60,915	0/0:14,0:14:42.13:0,42,623	0/0:21,0:21:63.20:0,63,942	0/0:20,0:20:60.17:0,60,873	0/0:18,0:18:51.13:0,51,716	0/0:20,0:20:54.17:0,54,799	0/0:23,0:23:55.74:0,56,830	0/0:15,0:15:36.08:0,36,487	0/1:8,17:26:62.63:1088,0,63	0/0:23,0:23:66.19:0,66,967	1/1:0,8:8:24.08:462,24,0
chr10	84655307	.	AAG	A	1330.26	PASS	AB=0.577;AC=5;AF=0.089;AN=56;BaseQRankSum=9.395;DP=608;FS=7.728;HRun=0;HaplotypeScore=85.2704;InbreedingCoeff=0.7010;MQ=58.75;MQ0=10;MQRankSum=-6.293;QD=26.61;ReadPosRankSum=0.644;VQSLOD=4.3708;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,7:13:16.34:260,16,0	0/0:5,0:5:12.03:0,12,179	0/0:63,0:21:2.88:0,3,370	0/0:84,0:28:17.87:0,18,482	0/0:24,0:24:66.23:0,66,1123	0/0:15,0:15:39.13:0,39,669	0/0:12,0:12:24.08:0,24,411	0/0:22,0:22:57.19:0,57,972	0/0:19,0:19:45.05:0,45,735	0/0:31,0:31:72.24:0,72,1205	0/0:33,0:33:84.27:0,84,1400	0/0:13,0:13:33.11:0,33,566	0/0:12,0:12:33.11:0,33,566	0/0:16,0:16:39.13:0,39,669	0/0:17,0:17:45.14:0,45,745	0/0:12,0:12:30.10:0,30,508	0/0:29,0:28:56.84:0,57,1152	0/0:15,0:15:39.07:0,39,634	0/0:12,0:12:18.06:0,18,309	0/0:18,0:18:54.18:0,54,925	0/0:10,0:9:21.07:0,21,360	0/0:19,0:19:57.19:0,57,969	0/0:21,0:21:57.14:0,57,944	0/0:24,0:23:55.48:0,55,852	0/0:15,0:15:45.14:0,45,744	0/1:8,22:30:19.83:921,0,20	0/0:17,0:17:51.11:0,51,840	1/1:0,7:7:21.07:276,21,0
chr10	84655480	.	AAG	A	398.77	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.373;DP=572;FS=14.115;HRun=0;HaplotypeScore=86.1152;InbreedingCoeff=0.8345;MQ=66.57;MQ0=1;MQRankSum=-1.838;QD=19.94;ReadPosRankSum=-1.286;VQSLOD=2.6229;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:21.07:0,21,363	0/0:4,0:4:12.04:0,12,218	0/0:47,0:28:47.51:0,48,793	0/0:56,0:30:53.44:0,53,835	0/0:19,0:19:54.19:0,54,978	0/0:15,0:15:39.10:0,39,646	1/1:3,16:20:6.63:480,7,0	0/0:27,0:27:75.25:0,75,1333	0/0:21,0:21:57.19:0,57,1016	0/0:22,0:22:66.20:0,66,1113	0/0:21,0:21:63.19:0,63,1085	0/0:13,0:13:33.11:0,33,598	0/0:19,0:19:54.18:0,54,963	0/0:13,0:13:39.13:0,39,703	0/0:20,0:20:54.19:0,54,974	0/0:15,0:15:45.10:0,45,778	0/0:22,0:22:62.98:0,63,1068	0/0:20,0:19:37.86:0,38,756	0/0:18,0:18:51.16:0,51,894	0/0:11,0:11:30.08:0,30,512	0/0:33,0:32:93.16:0,93,1544	0/0:12,0:12:36.08:0,36,580	0/0:11,0:11:30.09:0,30,515	0/0:30,0:30:77.18:0,77,1462	0/0:14,0:14:39.09:0,39,620	0/0:27,0:27:59.97:0,60,1254	0/0:22,0:22:66.23:0,66,1196	0/0:4,0:4:11.66:0,12,123
chr10	84655699	.	TA	T	779.54	PASS	AB=1.000;AC=16;AF=0.308;AN=52;BaseQRankSum=6.088;DP=379;FS=0.000;HRun=13;HaplotypeScore=53.9874;InbreedingCoeff=0.7146;MQ=61.30;MQ0=15;MQRankSum=-4.602;QD=6.90;ReadPosRankSum=-0.460;VQSLOD=1.7417;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:6:14.86:0,15,131	0/1:20,0:11:20.46:20,0,115	0/1:13,0:5:6.47:16,0,6	0/0:22,0:23:54.35:0,54,501	0/0:10,0:10:18.02:0,18,171	1/1:2,0:6:10.89:35,11,0	1/1:17,8:21:1.45:153,1,0	0/0:20,0:19:44.81:0,45,403	0/0:29,1:29:50.16:0,50,628	0/0:25,1:28:45.57:0,46,535	0/0:9,0:8:15.01:0,15,140	0/0:10,0:10:24.03:0,24,229	0/0:11,0:11:26.93:0,27,238	0/0:18,0:16:48.07:0,48,461	0/0:9,0:8:23.98:0,24,214	0/0:30,0:28:71.73:0,72,651	0/0:25,0:24:38.02:0,38,503	1/1:6,13:18:38.68:278,39,0	1/1:2,8:9:20.87:153,21,0	1/1:2,3:5:10.77:70,11,0	1/1:0,2:2:5.92:39,6,0	0/0:3,0:3:7.26:0,7,61	0/0:10,0:10:24.88:0,25,226	0/0:17,0:17:41.97:0,42,374	0/0:2,0:2:2.98:0,3,21	1/1:5,6:12:28.79:193,29,0	./.
chr10	84655717	.	CAAAGACAGAG	C	1861.44	PASS	AB=0.962;AC=13;AF=0.232;AN=56;BaseQRankSum=6.262;DP=400;FS=10.925;HRun=0;HaplotypeScore=135.2726;InbreedingCoeff=0.7818;MQ=72.83;MQ0=0;MQRankSum=-5.761;QD=25.15;ReadPosRankSum=0.393;VQSLOD=2.6187;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:31.35:0,31,1035	0/0:6,0:6:18.06:0,18,749	0/0:32,0:26:28.12:0,28,646	0/1:24,0:12:21.77:22,0,298	0/0:30,0:30:78.27:0,78,3441	0/0:9,0:9:27.09:0,27,1339	0/0:9,0:9:18.06:0,18,762	1/1:10,0:10:6:54,6,0	0/0:19,0:19:48.13:0,48,2091	0/0:26,0:26:66.21:0,66,2672	0/0:27,0:27:63.20:0,63,2467	0/0:7,0:7:18.06:0,18,705	0/0:10,0:10:24.08:0,24,1137	0/0:7,0:7:15.05:0,15,621	0/0:16,0:16:39.13:0,39,1827	0/0:8,0:8:21.07:0,21,1027	0/0:32,0:30:66.60:0,67,2656	0/0:21,0:21:57.16:0,57,2220	1/1:8,3:11:11.25:285,11,0	1/1:5,4:9:24.08:636,24,0	1/1:2,1:3:3.01:93,3,0	1/1:0,6:6:12.04:349,12,0	0/0:8,0:8:24.08:0,24,1171	0/0:11,0:11:16.82:0,17,766	0/0:15,0:15:42.14:0,42,2007	0/0:16,0:16:47.19:0,47,1605	1/1:5,5:10:21.07:596,21,0	0/0:2,0:2:2.29:0,2,108
chr10	84655830	.	CAAAGAG	C	99.78	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.687;DP=506;FS=3.236;HRun=0;HaplotypeScore=121.1338;InbreedingCoeff=0.7867;MQ=59.47;MQ0=3;MQRankSum=-4.144;QD=16.63;ReadPosRankSum=-1.343;VQSLOD=3.1982;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:12.04:0,12,864	0/0:2,0:2:6.02:0,6,182	0/0:27,0:16:25.99:0,26,393	0/0:30,0:14:24.03:0,24,483	0/0:18,0:18:45.15:0,45,1513	0/0:12,0:12:27.05:0,27,826	1/1:2,4:6:9.03:183,9,0	0/0:20,0:19:39.10:0,39,1290	0/0:19,0:19:57.20:0,57,1900	0/0:22,0:22:60.20:0,60,1792	0/0:22,0:22:63.22:0,63,2026	0/0:10,0:10:24.08:0,24,781	0/0:11,0:11:30.10:0,30,986	0/0:16,0:16:42.14:0,42,1342	0/0:14,0:14:36.12:0,36,1181	0/0:11,0:11:30.10:0,30,969	0/0:26,0:26:33.89:0,34,2046	0/0:22,0:22:12.21:0,12,1523	0/0:16,0:16:39.13:0,39,1202	0/0:25,0:25:69.08:0,69,1914	0/0:18,0:18:49.49:0,49,1420	0/0:12,0:12:33.10:0,33,1043	0/0:16,0:16:42.13:0,42,1282	0/0:18,0:18:48.16:0,48,1570	0/0:22,0:22:48.16:0,48,1569	0/0:32,0:32:87.29:0,87,2764	0/0:22,0:22:57.14:0,57,1654	0/0:10,0:10:18.06:0,18,555
chr10	84655900	.	A	AC	1405.02	PASS	AB=0.800;AC=9;AF=0.161;AN=56;BaseQRankSum=3.948;DP=594;FS=6.313;HRun=0;HaplotypeScore=100.5705;InbreedingCoeff=-0.1921;MQ=65.46;MQ0=10;MQRankSum=-3.545;QD=8.31;ReadPosRankSum=-2.403;VQSLOD=2.3207;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,5:25:99:131,0,610	0/0:11,0:11:33.11:0,33,461	0/0:55,0:23:46.33:0,46,600	0/0:96,0:36:38.69:0,39,697	0/0:25,0:25:72.20:0,72,984	0/0:8,0:8:24.05:0,24,315	0/0:12,0:12:26.93:0,27,308	0/1:19,2:20:26.91:27,0,471	0/0:16,0:16:48.16:0,48,671	0/0:19,0:19:57.17:0,57,767	0/0:16,0:16:48.16:0,48,670	0/0:10,0:10:30.10:0,30,420	0/0:16,0:16:45.11:0,45,607	0/0:15,0:15:42.14:0,42,586	0/0:14,0:14:39.13:0,39,545	0/0:12,0:11:33.11:0,33,462	0/0:31,0:31:48.42:0,48,973	0/0:16,0:19:16.23:0,16,548	0/1:13,7:19:99:189,0,448	0/1:11,7:18:99:236,0,404	0/1:12,2:14:99:103,0,378	0/1:6,3:9:71.84:72,0,223	0/0:14,0:14:42.14:0,42,588	0/0:22,0:22:63.21:0,63,881	0/0:14,0:14:42.14:0,42,587	0/1:25,9:34:99:422,0,789	0/1:11,9:19:99:342,0,369	0/1:7,1:8:23.80:24,0,269
chr10	84655978	.	GAAAGAGA	G	330.43	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.426;DP=612;FS=8.569;HRun=0;HaplotypeScore=151.5101;InbreedingCoeff=0.9754;MQ=67.41;MQ0=6;MQRankSum=-2.705;QD=30.04;ReadPosRankSum=-1.032;VQSLOD=2.6348;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:51.11:0,51,1381	0/0:7,0:7:21.03:0,21,709	0/0:51,0:30:37.39:0,37,755	0/0:66,0:29:35.51:0,36,980	0/0:26,0:26:69.13:0,69,2307	0/0:8,0:8:18.04:0,18,526	1/1:3,8:11:18.06:421,18,0	0/0:26,0:26:57.17:0,57,1661	0/0:26,0:26:66.21:0,66,2164	0/0:31,0:31:66.79:0,67,2850	0/0:17,0:17:45.15:0,45,1434	0/0:14,0:14:36.11:0,36,1238	0/0:22,0:22:54.11:0,54,1645	0/0:11,0:11:33.09:0,33,1066	0/0:17,0:17:51.16:0,51,1722	0/0:20,0:19:51.16:0,51,1806	0/0:27,0:26:68.25:0,68,2375	0/0:19,0:19:51.15:0,51,1843	0/0:18,0:18:51.17:0,51,1637	0/0:22,0:22:57.14:0,57,1964	0/0:13,0:13:26.54:0,27,830	0/0:9,0:9:24.08:0,24,828	0/0:12,0:12:33.10:0,33,1113	0/0:21,0:21:51.38:0,51,2095	0/0:11,0:11:30.10:0,30,1134	0/0:34,0:34:93.31:0,93,2593	0/0:33,0:33:90.27:0,90,3115	0/0:15,0:15:35.87:0,36,999
chr10	84656046	.	GAAAGAGAA	G	338.22	PASS	AB=0.979;AC=3;AF=0.054;AN=56;BaseQRankSum=5.966;DP=601;FS=5.345;HRun=0;HaplotypeScore=171.8513;InbreedingCoeff=0.6288;MQ=75.11;MQ0=3;MQRankSum=0.292;QD=6.04;ReadPosRankSum=-3.113;VQSLOD=1.5595;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:30.10:0,30,1047	0/0:7,0:7:18.06:0,18,681	0/0:28,0:21:37.67:0,38,1058	0/1:45,0:36:60.29:60,0,1298	0/0:28,0:28:81.28:0,81,3108	0/0:11,0:11:28.83:0,29,1216	1/1:5,4:7:15.05:380,15,0	0/0:22,0:22:60.20:0,60,2095	0/0:25,0:25:66.23:0,66,2606	0/0:37,0:37:88.84:0,89,3298	0/0:30,0:30:85.53:0,86,3153	0/0:17,0:17:36.12:0,36,1454	0/0:19,0:19:48.15:0,48,1852	0/0:11,0:11:33.11:0,33,1375	0/0:15,0:15:42.14:0,42,1676	0/0:14,0:13:39.12:0,39,1483	0/0:34,0:34:65.30:0,65,3007	0/0:17,0:17:39.13:0,39,1540	0/0:21,0:19:42.12:0,42,1226	0/0:13,0:13:30.10:0,30,1140	0/0:14,0:14:36.08:0,36,1297	0/0:24,0:24:63.22:0,63,2442	0/0:17,0:17:45.15:0,45,1854	0/0:24,0:24:41.10:0,41,1617	0/0:22,0:22:60.21:0,60,2489	0/0:30,0:30:75.21:0,75,2955	0/0:34,0:34:96.33:0,96,3710	0/0:19,0:19:54.18:0,54,2199
chr10	84656087	.	GAGAA	G	594.93	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=7.325;DP=684;FS=14.697;HRun=0;HaplotypeScore=137.1829;InbreedingCoeff=0.4249;MQ=78.30;MQ0=5;MQRankSum=-3.974;QD=8.38;ReadPosRankSum=-0.352;VQSLOD=1.9052;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,12:16:37.48:647,37,0	0/0:4,0:4:12.01:0,12,265	0/0:53,0:23:51.69:0,52,644	0/0:93,0:49:52.70:0,53,1022	0/0:36,0:36:99:0,99,2521	0/0:8,0:8:1.09:0,1,396	0/0:10,0:10:30.10:0,30,720	0/0:27,0:27:75.26:0,75,1693	0/0:19,0:19:54.18:0,54,1374	0/0:38,0:38:99:0,111,2733	0/0:23,0:23:66.23:0,66,1725	0/0:18,0:18:51.17:0,51,1177	0/0:18,0:18:51.16:0,51,1275	0/0:16,0:16:48.16:0,48,1259	0/0:13,0:13:39.13:0,39,1047	0/0:20,0:20:7.20:0,7,1389	0/1:38,0:38:52.96:53,0,2244	0/1:17,0:17:1.83:2,0,1062	0/0:11,0:11:27.09:0,27,700	0/0:16,0:16:45.11:0,45,1095	0/0:22,0:22:66.23:0,66,1642	0/0:16,0:16:48.16:0,48,1295	0/0:25,0:25:75.23:0,75,1925	0/0:27,0:27:25.12:0,25,1666	0/0:25,0:25:75.26:0,75,1910	0/0:28,0:28:78.26:0,78,1928	0/0:25,0:24:72.18:0,72,1791	0/0:21,0:19:54.12:0,54,1191
chr10	84656165	.	AG	A	592.53	PASS	AB=0.839;AC=6;AF=0.107;AN=56;BaseQRankSum=7.727;DP=693;FS=8.735;HRun=2;HaplotypeScore=141.9949;InbreedingCoeff=0.2549;MQ=69.02;MQ0=14;MQRankSum=-4.999;QD=3.31;ReadPosRankSum=-1.262;VQSLOD=-0.6826;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,3:14:72.17:134,0,72	0/0:8,0:8:21.07:0,21,304	0/0:76,0:27:52.83:0,53,600	0/1:120,0:45:23.26:23,0,508	0/0:31,0:31:93.30:0,93,1343	0/0:16,0:16:47.83:0,48,675	0/1:12,2:12:13.45:13,0,82	0/0:20,0:19:51.15:0,51,701	0/0:18,0:18:54.17:0,54,774	0/0:38,0:38:99:0,111,1599	0/0:16,0:16:42.14:0,42,617	0/0:19,0:19:54.18:0,54,795	0/0:18,0:18:54.18:0,54,795	0/0:11,0:11:33.11:0,33,489	0/0:18,0:18:54.18:0,54,804	0/0:24,0:24:66.21:0,66,942	0/0:24,0:23:67.47:0,67,963	0/0:18,0:18:41.60:0,42,663	0/0:8,0:8:24.08:0,24,355	0/0:22,0:22:57.18:0,57,833	0/0:22,0:20:54.24:0,54,761	0/0:12,0:12:36.12:0,36,537	0/0:17,0:17:46.40:0,46,676	0/0:31,0:31:79.31:0,79,1119	0/0:18,0:18:48.15:0,48,696	0/1:9,9:17:99:246,0,311	0/0:29,0:27:87.21:0,87,1244	1/1:3,8:9:24.08:305,24,0
chr10	84656172	.	GAGAC	G	1014.06	PASS	AB=0.812;AC=5;AF=0.089;AN=56;BaseQRankSum=6.526;DP=701;FS=3.130;HRun=0;HaplotypeScore=178.8371;InbreedingCoeff=0.3366;MQ=68.69;MQ0=17;MQRankSum=-3.711;QD=17.19;ReadPosRankSum=-3.715;VQSLOD=2.6613;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,3:15:74.99:200,0,75	0/0:9,0:9:24.08:0,24,669	0/0:88,0:33:21.21:0,21,926	0/0:123,0:47:20.43:0,20,946	0/0:30,0:30:90.29:0,90,2416	0/0:18,0:18:23.34:0,23,1397	0/1:14,2:14:55.03:55,0,504	0/0:18,0:17:47.71:0,48,748	0/0:16,0:16:48.15:0,48,1322	0/0:37,0:37:99:0,111,3046	0/0:16,0:16:48.15:0,48,1273	0/0:17,0:17:51.18:0,51,1452	0/0:20,0:20:60.21:0,60,1727	0/0:11,0:11:33.11:0,33,872	0/0:19,0:19:54.19:0,54,1520	0/0:23,0:23:57.15:0,57,1579	0/0:20,0:19:44.65:0,45,1473	0/0:17,0:17:26.02:0,26,1279	0/0:9,0:8:24.08:0,24,553	0/0:20,0:20:60.10:0,60,1097	0/0:21,0:19:44.26:0,44,865	0/0:13,0:13:39.12:0,39,674	0/0:18,0:18:54.15:0,54,1337	0/0:28,0:28:68.14:0,68,1925	0/0:15,0:15:42.14:0,42,1203	0/1:12,8:19:99:394,0,234	0/0:29,0:27:83.94:0,84,1419	1/1:1,7:8:24.08:488,24,0
chr10	84656175	.	ACG	A	145.62	PASS	AB=0.941;AC=5;AF=0.089;AN=56;BaseQRankSum=8.440;DP=693;FS=0.668;HRun=0;HaplotypeScore=161.8708;InbreedingCoeff=0.4296;MQ=67.46;MQ0=15;MQRankSum=-4.262;QD=2.51;ReadPosRankSum=-3.528;VQSLOD=1.9338;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,1:15:4.25:60,0,4	0/0:10,0:10:27.09:0,27,530	0/0:87,2:33:58.57:0,59,877	0/0:118,1:45:22.52:0,23,852	0/0:30,0:30:86.65:0,87,1656	0/0:18,1:19:28.81:0,29,1035	0/1:15,1:14:3.26:3,0,354	0/0:17,0:16:45.02:0,45,629	0/0:15,0:15:45.15:0,45,896	0/0:36,0:36:99:0,108,2086	0/0:15,0:15:45.15:0,45,895	0/0:17,0:17:51.17:0,51,1001	0/0:20,0:20:60.21:0,60,1217	0/0:11,0:11:33.08:0,33,576	0/0:19,0:19:54.17:0,54,1043	0/0:21,0:21:57.20:0,57,1142	0/0:20,0:19:17.78:0,18,989	0/0:17,1:18:4.32:0,4,865	0/0:12,0:11:29.69:0,30,490	0/0:19,0:19:53.58:0,54,844	0/0:20,0:18:44.12:0,44,726	0/0:13,0:13:39.05:0,39,620	0/0:16,0:16:48.16:0,48,892	0/0:26,1:28:68.09:0,68,1344	0/0:15,0:15:42.14:0,42,846	0/1:19,0:18:40.07:87,0,40	0/0:30,0:28:87.22:0,87,1398	1/1:8,0:8:21.40:112,21,0
chr10	84656182	.	AAGAG	A	3879.72	PASS	AB=0.857;AC=14;AF=0.250;AN=56;BaseQRankSum=6.483;DP=690;FS=3.215;HRun=0;HaplotypeScore=170.2209;InbreedingCoeff=0.7987;MQ=66.95;MQ0=19;MQRankSum=-7.926;QD=15.33;ReadPosRankSum=-1.086;VQSLOD=3.4323;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:15:0.03:0,0,92	0/0:10,0:10:21.07:0,21,533	0/0:99,0:35:68.60:0,69,1082	0/1:130,0:46:45.74:46,0,965	0/0:26,0:26:78.27:0,78,1974	0/0:19,0:19:46.40:0,46,1145	0/0:8,0:13:2.21:0,2,68	1/1:6,12:17:36.09:595,36,0	0/0:18,0:18:51.14:0,51,1191	0/0:30,0:30:63.22:0,63,1559	0/0:15,0:15:39.10:0,39,856	0/0:15,0:15:30.10:0,30,756	0/0:21,0:21:54.18:0,54,1308	0/0:9,0:9:24.08:0,24,595	0/0:18,0:18:48.16:0,48,1193	0/0:21,0:21:51.18:0,51,1294	0/0:20,0:19:44.50:0,45,1022	0/0:19,0:19:23.50:0,23,993	1/1:4,8:11:21.07:353,21,0	1/1:10,8:18:38.95:532,39,0	1/1:8,9:15:28.67:442,29,0	1/1:2,11:13:33.11:568,33,0	0/0:16,0:16:45.12:0,45,1000	0/0:25,0:25:47.87:0,48,1189	0/0:16,0:16:33.11:0,33,809	0/0:9,0:18:17.77:0,18,207	1/1:4,26:29:81.20:1345,81,0	0/0:7,0:7:5.94:0,6,42
chr10	84656223	.	C	CAGAG	15318.58	PASS	AC=28;AF=0.519;AN=54;BaseQRankSum=-3.792;DP=580;FS=0.349;HRun=0;HaplotypeScore=128.6451;InbreedingCoeff=0.9464;MQ=71.19;MQ0=2;MQRankSum=-7.891;QD=57.37;ReadPosRankSum=0.442;VQSLOD=5.8656;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,9:16:13.20:794,13,0	1/1:0,13:13:33.11:921,33,0	0/0:47,0:32:2.98:0,3,816	0/0:69,0:34:21.46:0,21,566	0/0:33,0:33:90.27:0,90,1657	0/0:18,0:18:51.09:0,51,798	1/1:1,13:15:24.08:669,24,0	1/1:5,29:37:99:2200,105,0	0/0:16,0:16:45.12:0,45,827	1/1:0,25:27:78.03:1745,78,0	1/1:1,10:11:24.08:667,24,0	0/0:13,0:13:39.12:0,39,742	0/0:20,0:20:60.19:0,60,1129	0/0:11,0:11:30.06:0,30,484	0/0:20,0:20:60.16:0,60,1070	1/1:0,24:24:42.14:1173,42,0	1/1:6,12:18:44.29:1114,44,0	0/0:17,0:17:51.08:0,51,856	1/1:3,11:13:36.07:773,36,0	1/1:1,17:18:39.12:1020,39,0	1/1:5,7:12:3.51:586,4,0	1/1:1,9:12:21.07:530,21,0	0/0:19,0:19:54.12:0,54,925	0/0:17,0:17:36.03:0,36,683	0/0:10,0:10:20.89:0,21,332	1/1:4,13:16:48.13:1212,48,0	1/1:4,24:31:77.96:1915,78,0	./.
chr10	84656264	.	AG	A	594.18	PASS	AB=0.784;AC=4;AF=0.071;AN=56;BaseQRankSum=6.201;DP=568;FS=0.776;HRun=1;HaplotypeScore=104.7235;InbreedingCoeff=0.3840;MQ=71.23;MQ0=4;MQRankSum=-2.370;QD=6.32;ReadPosRankSum=-0.571;VQSLOD=0.2233;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:39.05:0,39,707	0/0:12,0:12:36.09:0,36,511	0/0:52,0:29:71.76:0,72,940	0/1:69,0:41:12.05:12,0,721	0/0:29,0:29:84.28:0,84,1314	0/0:11,0:11:33.11:0,33,514	0/0:12,0:12:17.99:0,18,248	0/0:26,0:26:78.25:0,78,1207	0/0:23,0:23:69.24:0,69,1102	0/0:23,0:23:66.21:0,66,1014	0/0:11,0:11:30.10:0,30,479	0/0:16,0:16:48.16:0,48,742	0/0:19,0:19:57.11:0,57,788	0/0:11,0:11:33.11:0,33,527	0/0:14,0:14:42.06:0,42,627	0/0:25,0:25:51.17:0,51,811	0/0:15,0:15:40.02:0,40,599	0/0:14,0:14:42.06:0,42,603	0/0:19,0:19:54.11:0,54,759	0/0:19,0:19:48.09:0,48,721	0/0:20,0:19:39.11:0,39,650	0/0:11,0:11:33.11:0,33,516	0/0:24,0:24:66.21:0,66,1017	0/0:11,0:11:30.05:0,30,477	0/0:14,0:14:39.13:0,39,623	0/1:5,16:21:74.72:601,0,75	0/0:24,0:24:60.57:0,61,921	1/1:0,4:2:6.02:84,6,0
chr10	84656381	.	AAG	A	1932.63	PASS	AB=0.781;AC=6;AF=0.107;AN=56;BaseQRankSum=9.216;DP=528;FS=14.903;HRun=0;HaplotypeScore=64.4028;InbreedingCoeff=0.6216;MQ=70.22;MQ0=5;MQRankSum=-2.008;QD=16.81;ReadPosRankSum=2.863;VQSLOD=2.5452;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,20:27:66.20:824,66,0	0/0:4,0:4:9.03:0,9,151	0/1:29,0:19:9.03:9,0,378	0/0:41,0:25:43.52:0,44,640	0/0:31,0:31:78.25:0,78,1272	0/0:17,0:17:33.11:0,33,538	0/0:8,0:8:21.07:0,21,339	0/0:40,0:40:99:0,105,1662	0/0:14,0:14:42.14:0,42,696	0/0:19,0:19:45.15:0,45,727	0/0:17,0:17:48.15:0,48,775	0/0:9,0:9:24.07:0,24,376	0/0:10,0:10:27.09:0,27,437	0/0:8,0:8:21.04:0,21,299	0/0:20,0:20:54.16:0,54,846	0/0:18,0:18:48.15:0,48,755	0/0:20,0:20:45.07:0,45,690	0/0:14,0:14:42.14:0,42,696	0/0:12,0:12:30.10:0,30,497	0/0:21,0:21:54.17:0,54,876	0/0:13,0:13:32.82:0,33,474	0/0:7,0:7:18.06:0,18,301	0/0:14,0:14:36.11:0,36,575	0/0:28,0:27:65.40:0,65,1131	0/0:14,0:14:42.12:0,42,652	0/1:6,21:27:31.88:662,0,32	0/0:14,0:14:36.12:0,36,601	1/1:1,30:29:45.14:573,45,0
chr10	84656490	.	C	CT	3599.63	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-7.338;DP=427;FS=0.412;HRun=11;HaplotypeScore=46.0434;InbreedingCoeff=0.9328;MQ=66.74;MQ0=2;MQRankSum=1.353;QD=21.43;ReadPosRankSum=-0.315;VQSLOD=4.1022;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:25:47.76:455,48,0	0/0:9,0:9:20.90:0,21,163	0/0:14,0:13:16.88:0,17,116	0/0:12,0:7:3.71:0,4,27	0/0:20,0:20:53.39:0,53,405	0/0:10,0:10:23.91:0,24,186	0/0:12,0:12:12.27:0,12,206	1/1:9,30:39:90.08:881,90,0	0/0:13,0:13:20.79:0,21,155	0/0:19,0:19:47.78:0,48,369	0/0:13,0:13:35.80:0,36,269	0/0:5,0:5:14.86:0,15,109	0/0:13,0:13:23.87:0,24,184	0/0:11,0:11:29.87:0,30,230	0/0:11,0:11:29.87:0,30,232	0/0:16,0:17:37.89:0,38,284	0/0:24,0:25:65.71:0,66,506	0/0:15,0:17:36.94:0,37,267	1/1:2,9:13:29.73:272,30,0	1/1:3,14:18:24.69:417,25,0	1/1:0,1:1:3.01:30,3,0	1/1:1,5:6:15.03:152,15,0	0/0:10,0:10:17.90:0,18,139	0/0:10,0:10:29.89:0,30,232	0/0:17,0:17:41.83:0,42,325	1/1:5,17:21:24.85:427,25,0	1/1:2,11:13:32.96:320,33,0	1/1:12,18:31:48.72:645,49,0
chr10	84657262	.	GA	G	980.39	PASS	AB=0.825;AC=17;AF=0.327;AN=52;BaseQRankSum=2.430;DP=490;FS=3.516;HRun=16;HaplotypeScore=72.6563;InbreedingCoeff=0.2388;MQ=47.10;MQ0=15;MQRankSum=0.909;QD=4.46;ReadPosRankSum=1.321;VQSLOD=1.5884;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,1:39:40.77:0,41,410	1/1:3,4:7:15.84:83,16,0	./.	./.	0/0:24,0:25:6.51:0,7,140	0/0:18,2:20:7.14:0,7,238	0/0:19,1:17:15.48:0,15,193	1/1:13,8:22:11.09:137,11,0	0/0:9,1:10:2.61:0,3,112	0/1:15,7:21:21.56:103,0,22	0/1:15,0:14:1.79:7,0,2	0/0:13,0:13:8.39:0,8,129	0/0:15,0:15:20.84:0,21,157	0/0:12,1:13:3.38:0,3,125	0/0:11,0:10:18.82:0,19,139	0/1:8,5:12:13.08:108,0,13	0/1:18,6:23:25.86:149,0,26	0/0:13,0:13:2.06:0,2,95	1/1:15,10:24:4.41:121,4,0	1/1:16,4:20:1.66:110,2,0	0/1:8,3:11:10.36:47,0,10	1/1:3,8:10:17.60:107,18,0	0/0:15,0:15:19.34:0,19,145	0/0:23,0:24:48.84:0,49,364	0/1:11,1:13:22.83:23,0,79	0/0:24,2:26:4.74:0,5,240	0/1:24,5:31:68.16:147,0,68	0/0:8,0:8:11.80:0,12,85
chr10	84658660	.	AG	A	827.91	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.129;DP=594;FS=0.000;HRun=1;HaplotypeScore=58.7626;InbreedingCoeff=0.9830;MQ=89.04;MQ0=0;MQRankSum=-2.309;QD=36.00;ReadPosRankSum=0.802;VQSLOD=3.5994;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,2059	0/0:11,0:11:33.11:0,33,527	0/0:30,0:28:84.27:0,84,1300	0/0:29,0:29:80.67:0,81,1181	0/0:17,0:17:51.16:0,51,791	0/0:21,0:21:60.14:0,60,959	1/1:0,23:23:66.22:923,66,0	0/0:27,0:27:81.26:0,81,1253	0/0:17,0:17:45.15:0,45,719	0/0:23,0:23:69.22:0,69,1079	0/0:19,0:19:57.19:0,57,911	0/0:21,0:21:63.21:0,63,1007	0/0:12,0:12:36.12:0,36,568	0/0:13,0:13:39.12:0,39,600	0/0:19,0:19:57.19:0,57,899	0/0:9,0:9:27.09:0,27,423	0/0:28,0:28:80.76:0,81,1268	0/0:15,0:15:45.15:0,45,719	0/0:26,0:25:72.24:0,72,1131	0/0:25,0:25:75.24:0,75,1176	0/0:39,0:39:99:0,117,1770	0/0:20,0:20:60.20:0,60,957	0/0:14,0:14:42.14:0,42,671	0/0:15,0:15:45.15:0,45,719	0/0:26,0:26:75.26:0,75,1198	0/0:22,0:22:66.21:0,66,1031	0/0:24,0:24:72.25:0,72,1151	0/0:5,0:5:15.05:0,15,240
chr10	84658824	.	C	CA	1556.37	PASS	AB=0.878;AC=20;AF=0.357;AN=56;BaseQRankSum=0.311;DP=424;FS=9.593;HRun=14;HaplotypeScore=59.1397;InbreedingCoeff=0.3675;MQ=50.93;MQ0=28;MQRankSum=0.402;QD=7.34;ReadPosRankSum=-2.077;VQSLOD=1.2258;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,17:35:20.43:512,20,0	1/1:2,4:6:18:157,18,0	0/1:16,0:1:0:0,0,0	0/1:17,0:3:1.73:2,0,2	0/0:15,0:18:32.48:0,32,181	0/1:11,1:14:17.16:17,0,143	0/0:12,0:12:13.84:0,14,83	0/0:18,2:21:16.70:0,17,217	0/0:11,0:11:14.73:0,15,95	1/1:10,3:12:7.49:165,7,0	0/1:3,2:6:6.84:66,0,7	0/0:9,0:10:18.85:0,19,108	0/1:9,2:9:12.21:12,0,53	0/0:16,0:16:25.10:0,25,156	0/1:11,0:10:2:2,0,93	0/1:12,2:11:4.28:87,0,4	1/1:6,13:19:30.12:373,30,0	0/0:21,2:19:13.98:0,14,203	0/0:15,0:16:36.63:0,37,214	0/0:16,0:16:36.88:0,37,223	0/0:2,0:2:5.91:0,6,38	0/1:6,0:5:0:0,0,0	0/1:13,1:12:8.65:9,0,78	0/0:9,0:8:10.86:0,11,64	0/0:24,0:24:57.35:0,57,351	0/1:8,7:15:40.32:182,0,40	0/0:22,0:23:54.89:0,55,318	1/1:3,8:10:1.73:139,2,0
chr10	84658852	.	C	CT	1277.84	PASS	AB=0.955;AC=20;AF=0.357;AN=56;BaseQRankSum=-0.922;DP=432;FS=26.909;HRun=13;HaplotypeScore=62.4740;InbreedingCoeff=0.6109;MQ=64.66;MQ0=4;MQRankSum=-1.105;QD=6.91;ReadPosRankSum=-1.148;VQSLOD=0.1557;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,21:38:8.08:380,8,0	1/1:5,4:9:17.95:151,18,0	0/0:30,0:8:9.25:0,9,40	0/0:22,0:7:4.89:0,5,19	0/0:22,0:25:48.34:0,48,308	0/0:18,0:18:29.65:0,30,205	1/1:6,10:17:6.46:173,6,0	0/1:23,0:25:15.76:16,0,175	0/0:10,0:10:17.79:0,18,123	1/1:3,11:14:26.76:230,27,0	1/1:3,3:6:7.25:59,7,0	0/0:8,0:8:5.84:0,6,41	0/0:6,0:6:5.86:0,6,41	0/1:9,1:10:10.07:10,0,83	0/0:11,0:11:28.75:0,29,188	1/1:4,1:5:3:28,3,0	1/1:15,13:28:6.74:198,7,0	0/0:16,1:17:26.05:0,26,169	0/0:23,0:23:29.98:0,30,254	0/0:14,0:15:33.80:0,34,216	0/0:6,0:6:11.88:0,12,82	0/0:1,0:1:2.98:0,3,21	0/0:10,0:11:19.78:0,20,125	0/0:5,0:5:11.89:0,12,82	0/0:21,0:21:37.61:0,38,252	1/1:9,0:15:0.28:92,0,0	0/0:15,0:16:28.75:0,29,191	1/1:9,3:18:3.52:123,4,0
chr10	84659075	.	TA	T	3935.26	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=9.453;DP=509;FS=7.724;HRun=7;HaplotypeScore=58.2862;InbreedingCoeff=0.9906;MQ=68.87;MQ0=1;MQRankSum=1.497;QD=25.89;ReadPosRankSum=4.993;VQSLOD=4.0595;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,42:44:99:1009,99,0	1/1:1,9:10:24.05:244,24,0	0/0:14,1:12:18.18:0,18,193	0/0:15,1:12:20.85:0,21,226	0/0:20,0:20:41.92:0,42,515	0/0:17,0:17:45.14:0,45,566	0/0:19,0:19:39.11:0,39,477	0/0:20,0:20:48.15:0,48,604	0/0:10,0:10:24.08:0,24,301	1/1:0,14:14:42.10:428,42,0	1/1:1,14:15:39.09:397,39,0	0/0:16,0:16:42.13:0,42,528	0/0:21,0:21:63.19:0,63,781	0/0:19,0:19:54.17:0,54,679	0/0:20,0:20:54.17:0,54,678	1/1:0,7:7:18.04:184,18,0	1/1:1,33:33:87.17:878,87,0	0/0:25,0:25:57.17:0,57,703	0/0:21,0:21:57.17:0,57,702	0/0:19,0:19:51.16:0,51,642	0/0:13,0:13:30.08:0,30,353	0/0:6,0:6:12.04:0,12,151	0/0:17,0:17:36.12:0,36,453	0/0:18,0:18:48.13:0,48,579	0/0:16,0:16:42.11:0,42,505	1/1:2,10:12:30.07:306,30,0	0/0:29,0:29:81.25:0,81,1006	1/1:0,16:16:48.11:489,48,0
chr10	84659193	.	AAG	A	633.57	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=1.601;DP=583;FS=3.761;HRun=0;HaplotypeScore=81.8695;InbreedingCoeff=0.4628;MQ=55.63;MQ0=11;MQRankSum=-3.089;QD=11.12;ReadPosRankSum=-3.422;VQSLOD=2.4862;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:40,5:45:77.60:717,78,0	0/0:10,0:10:2.23:0,2,127	0/0:16,0:7:16.21:0,16,132	0/0:14,0:8:8.69:0,9,95	0/0:31,1:31:42.21:0,42,359	0/0:17,0:16:38.43:0,38,421	0/0:17,0:16:22.85:0,23,257	0/0:33,1:34:74.03:0,74,552	0/0:12,0:12:23.67:0,24,280	0/0:25,0:24:27.72:0,28,401	0/0:12,0:11:2.35:0,2,129	0/0:19,0:19:35.51:0,36,348	0/0:14,0:14:29.86:0,30,305	0/0:10,0:10:20.84:0,21,263	0/0:24,0:24:41.83:0,42,474	0/1:12,0:12:21.35:21,0,81	0/0:39,0:38:18.19:0,18,525	0/0:31,0:31:53.05:0,53,663	0/0:31,0:29:29.75:0,30,473	0/0:23,0:21:28.60:0,29,303	0/0:15,0:14:31.12:0,31,253	0/0:15,0:15:11.95:0,12,203	0/0:16,0:16:35.41:0,35,299	0/0:19,0:19:23.75:0,24,230	0/0:18,0:18:32.80:0,33,401	0/0:15,0:14:20.30:0,20,217	0/0:22,0:21:44.52:0,45,306	0/0:26,0:25:53.62:0,54,597
chr10	84660644	.	GTCT	G	2107.48	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=4.278;DP=381;FS=0.000;HRun=0;HaplotypeScore=88.8895;InbreedingCoeff=0.9637;MQ=75.49;MQ0=2;MQRankSum=-3.258;QD=21.95;ReadPosRankSum=2.400;VQSLOD=3.4670;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:26:63:660,63,0	1/1:7,3:10:26.08:293,26,0	0/0:16,0:12:11.66:0,12,98	0/0:15,0:13:15.37:0,15,135	0/0:18,0:18:32.89:0,33,431	0/0:14,0:14:35.72:0,36,438	0/0:14,0:14:29.69:0,30,301	0/0:25,0:25:38.43:0,38,332	0/0:16,0:16:38.22:0,38,441	1/1:8,0:8:20.94:210,21,0	1/1:9,2:11:20.94:222,21,0	0/0:12,0:12:24.04:0,24,316	0/0:12,0:12:26.66:0,27,273	0/0:9,0:9:20.77:0,21,281	0/0:13,0:13:30.04:0,30,400	1/1:4,0:4:12.01:109,12,0	1/1:8,0:8:18.01:179,18,0	0/0:8,0:8:17.91:0,18,222	0/0:17,0:17:37.35:0,37,264	0/0:14,0:14:19.59:0,20,138	0/0:7,0:7:11.01:0,11,92	0/0:15,0:15:16.32:0,16,148	0/0:14,0:15:30.02:0,30,392	0/0:8,0:8:12:0,12,132	0/0:19,0:19:38.19:0,38,383	1/1:20,0:20:47.77:472,48,0	0/0:18,0:17:34:0,34,208	1/1:8,0:8:15.03:167,15,0
chr10	84660649	.	CTTCTTT	C	2240.93	PASS	AB=0.924;AC=11;AF=0.196;AN=56;BaseQRankSum=0.489;DP=385;FS=1.795;HRun=0;HaplotypeScore=116.5352;InbreedingCoeff=0.4333;MQ=61.80;MQ0=2;MQRankSum=-1.506;QD=21.76;ReadPosRankSum=3.668;VQSLOD=3.5069;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,11:25:62.37:1052,62,0	0/1:12,0:12:45.77:59,0,46	0/0:11,0:7:11.94:0,12,130	0/0:10,0:8:15.41:0,15,191	0/0:19,0:19:51.47:0,51,994	0/0:17,0:17:49.63:0,50,981	0/0:13,0:13:38.94:0,39,587	0/0:24,0:24:59.98:0,60,672	0/0:16,0:16:39.02:0,39,657	0/1:10,0:12:41.93:91,0,42	0/1:10,0:11:5.65:6,0,96	0/0:11,0:11:33.05:0,33,685	0/0:15,0:15:41.93:0,42,662	0/0:7,0:7:20.78:0,21,443	0/0:12,0:13:32.86:0,33,706	0/1:6,0:6:39.71:41,0,40	0/1:9,0:11:69.34:86,0,69	0/0:8,0:8:20.99:0,21,415	0/0:17,0:17:42.03:0,42,572	0/0:14,0:14:31.46:0,31,383	0/0:6,0:6:14.96:0,15,215	0/0:15,0:15:18.34:0,18,463	0/0:14,0:14:36.03:0,36,753	0/0:9,0:9:18.43:0,18,261	0/0:22,0:22:52.97:0,53,817	1/1:12,3:17:47.77:768,48,0	0/0:21,0:20:52.28:0,52,650	1/1:4,1:8:15.05:302,15,0
chr10	84660650	.	TTC	T	1911.94	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=4.679;DP=384;FS=1.034;HRun=0;HaplotypeScore=89.5892;InbreedingCoeff=0.6622;MQ=58.65;MQ0=3;MQRankSum=-5.676;QD=12.58;ReadPosRankSum=2.771;VQSLOD=3.4955;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:27:62.74:589,63,0	1/1:12,0:12:27.04:264,27,0	0/0:10,0:6:11.55:0,12,85	0/0:9,0:7:14.93:0,15,127	0/0:19,0:19:37.38:0,37,379	0/0:17,0:17:38.12:0,38,365	0/0:14,0:14:24.61:0,25,228	0/0:24,0:24:27.08:0,27,281	0/0:16,0:16:38.21:0,38,377	1/1:11,1:12:6.95:172,7,0	1/1:7,4:11:18.17:252,18,0	0/0:11,0:11:23.78:0,24,252	0/0:14,1:15:9.84:0,10,198	0/0:7,0:7:20.77:0,21,227	0/0:14,0:14:29.83:0,30,311	1/1:6,0:6:3.56:98,4,0	1/1:10,1:11:5.56:165,6,0	0/0:8,0:8:20.59:0,21,190	0/0:17,0:17:23.44:0,23,185	0/0:14,0:14:2.91:0,3,97	0/1:7,0:6:2.28:2,0,63	0/0:15,0:15:8.57:0,9,103	0/0:13,0:13:31.53:0,32,310	0/0:9,0:9:14.71:0,15,122	0/1:20,0:20:6.19:6,0,238	1/1:19,0:19:26.64:406,27,0	0/1:20,0:19:21.84:22,0,126	1/1:6,0:6:3.93:122,4,0
chr10	84660651	.	TC	T	1649.09	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=4.352;DP=386;FS=5.708;HRun=1;HaplotypeScore=87.7673;InbreedingCoeff=0.8808;MQ=58.38;MQ0=3;MQRankSum=-6.264;QD=15.27;ReadPosRankSum=1.544;VQSLOD=3.5670;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:27:62.89:492,63,0	1/1:11,1:12:26.99:239,27,0	0/0:10,0:6:11.55:0,12,85	0/0:9,0:7:14.86:0,15,117	0/0:18,1:19:31.43:0,31,293	0/0:17,0:17:42.28:0,42,310	0/0:14,1:15:28.47:0,28,203	0/0:22,1:23:18.46:0,18,288	0/0:16,0:16:38.18:0,38,330	1/1:13,0:13:26.80:221,27,0	1/1:9,2:11:10.51:186,11,0	0/0:13,0:13:17.29:0,17,186	0/0:15,0:15:17.25:0,17,172	0/0:7,0:7:20.76:0,21,187	0/0:14,0:14:29.25:0,29,242	1/1:7,0:7:12.01:109,12,0	1/1:12,0:12:12.51:151,13,0	0/0:8,0:8:16.05:0,16,138	0/0:17,0:17:37.24:0,37,238	0/0:13,0:13:23.86:0,24,151	0/0:7,0:6:8.86:0,9,66	0/0:14,0:14:32.65:0,33,189	0/0:13,0:13:24.19:0,24,226	0/0:9,0:9:14.86:0,15,107	0/0:19,0:19:0.85:0,1,192	1/1:19,0:19:19.16:349,19,0	0/0:20,0:19:35.88:0,36,211	1/1:6,0:6:2.28:97,2,0
chr10	84660652	.	CTT	C	706.83	PASS	AB=0.845;AC=17;AF=0.304;AN=56;BaseQRankSum=3.494;DP=403;FS=1.822;HRun=18;HaplotypeScore=105.0884;InbreedingCoeff=0.1694;MQ=55.91;MQ0=3;MQRankSum=-5.350;QD=3.46;ReadPosRankSum=5.479;VQSLOD=-0.6747;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:25.30:138,25,0	0/1:12,0:12:7.27:27,0,7	0/0:9,0:5:3:0,3,27	0/0:9,0:7:5.73:0,6,36	0/0:20,0:21:38.80:0,39,307	0/0:21,1:23:29.93:0,30,400	0/0:15,1:16:4.18:0,4,135	0/1:17,4:22:23.37:23,0,28	0/0:13,0:13:15.02:0,15,162	0/0:13,0:13:0.88:0,1,85	0/1:13,0:13:52.76:53,0,57	0/0:14,0:14:34.73:0,35,267	0/0:13,0:16:13.25:0,13,213	0/0:11,0:11:20.91:0,21,203	0/0:14,0:15:23.10:0,23,213	0/0:7,0:7:5.96:0,6,46	0/1:12,0:12:25.99:26,0,36	0/0:7,0:8:14.43:0,14,133	0/1:9,7:16:16.75:89,0,17	0/1:10,5:15:0.06:98,0,0	0/1:5,2:6:16.23:16,0,16	0/1:8,3:14:27.94:116,0,28	0/0:13,0:14:28.62:0,29,233	0/0:10,0:10:17.06:0,17,135	0/1:14,1:19:16.10:16,0,136	1/1:20,0:20:4.32:59,4,0	1/1:10,5:18:20.08:181,20,0	1/1:7,0:7:5.52:32,6,0
chr10	84660714	.	CT	C	4184.78	PASS	AB=0.794;AC=52;AF=0.929;AN=56;BaseQRankSum=3.950;DP=448;FS=2.059;HRun=2;HaplotypeScore=183.4594;InbreedingCoeff=0.3410;MQ=65.00;MQ0=0;MQRankSum=-0.817;QD=9.53;ReadPosRankSum=5.616;VQSLOD=1.6918;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:37:58.50:321,59,0	1/1:0,2:2:5.88:36,6,0	0/1:3,0:3:8.61:20,0,9	0/0:9,0:9:14.62:0,15,59	1/1:0,19:19:48.19:208,48,0	1/1:1,16:17:41.73:198,42,0	1/1:0,22:22:54.69:223,55,0	1/1:0,22:22:49.21:182,49,0	1/1:0,18:18:47.62:196,48,0	1/1:0,16:16:36.47:168,36,0	0/1:6,14:19:5.13:86,0,5	1/1:0,15:15:39.28:166,39,0	1/1:0,17:17:45.65:208,46,0	1/1:1,7:8:1.66:65,2,0	1/1:0,15:15:33.20:135,33,0	1/1:0,12:12:27.49:103,27,0	1/1:0,18:18:36.46:187,36,0	1/1:1,8:9:1.80:74,2,0	1/1:2,21:23:34.56:220,35,0	1/1:0,11:11:29.40:122,29,0	1/1:1,19:20:49.09:230,49,0	1/1:0,16:16:36.02:146,36,0	1/1:1,15:16:40.47:180,40,0	1/1:2,20:22:42.19:179,42,0	1/1:0,10:10:23.07:90,23,0	1/1:3,18:21:12.27:145,12,0	1/1:2,18:20:45.83:217,46,0	1/1:1,9:10:6.06:80,6,0
chr10	84661487	.	A	AT	3026.99	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-8.998;DP=423;FS=8.828;HRun=8;HaplotypeScore=49.7866;InbreedingCoeff=0.6417;MQ=69.70;MQ0=8;MQRankSum=-0.538;QD=13.82;ReadPosRankSum=-0.537;VQSLOD=2.2991;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:31:66.19:753,66,0	1/1:0,3:3:6.02:69,6,0	0/0:26,0:6:15.46:0,15,79	0/0:20,0:12:20.11:0,20,136	0/0:20,0:20:54.01:0,54,488	0/0:16,0:16:47.92:0,48,411	0/1:18,0:18:16.23:49,0,16	0/1:28,0:26:17.08:72,0,17	0/0:6,0:6:12:0,12,110	1/1:0,6:6:18.02:186,18,0	1/1:5,14:19:38.94:409,39,0	0/0:6,0:7:7.79:0,8,151	0/0:12,0:12:26.97:0,27,237	0/0:10,0:10:23.95:0,24,210	0/0:13,0:12:29.93:0,30,261	1/1:3,8:10:15.04:171,15,0	1/1:2,20:22:45.08:498,45,0	0/0:26,0:26:65.97:0,66,586	0/1:19,0:17:1.29:45,0,1	0/1:10,0:10:7.54:39,0,8	0/1:11,0:11:7.39:7,0,26	1/1:8,0:8:10.93:54,11,0	0/0:11,0:11:26.94:0,27,230	0/0:15,0:14:39.02:0,39,356	0/0:11,0:10:18.85:0,19,156	1/1:2,19:21:56.94:574,57,0	0/0:11,0:11:10.85:0,11,33	1/1:0,10:10:27.08:308,27,0
chr10	84662024	.	TA	T	1335.32	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=8.466;DP=528;FS=5.019;HRun=8;HaplotypeScore=48.0530;InbreedingCoeff=0.8234;MQ=58.44;MQ0=12;MQRankSum=-0.821;QD=18.55;ReadPosRankSum=1.936;VQSLOD=3.3675;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:31:74.97:699,75,0	0/0:6,0:6:18.05:0,18,217	0/0:15,0:9:17.21:0,17,231	0/1:5,0:5:8.13:8,0,117	0/0:23,0:23:69.21:0,69,833	0/0:27,0:27:75.23:0,75,904	0/0:9,0:8:21.06:0,21,254	0/0:52,0:45:99:0,129,1495	0/0:15,0:15:45.12:0,45,531	0/0:25,0:24:66.13:0,66,758	0/0:27,0:27:66.19:0,66,782	0/0:18,0:18:48.15:0,48,580	0/0:12,0:12:27.04:0,27,300	0/0:11,0:11:30.09:0,30,362	0/0:21,0:21:60.18:0,60,724	0/0:15,0:15:37.77:0,38,430	0/0:22,0:22:57.12:0,57,667	0/0:26,0:24:60.14:0,60,708	0/0:8,0:8:24.06:0,24,279	0/0:19,0:19:57.16:0,57,677	0/0:19,0:18:42.10:0,42,491	0/0:3,0:3:9.03:0,9,109	0/0:24,0:24:66.20:0,66,797	0/0:7,0:5:11.99:0,12,128	0/0:23,0:23:57.10:0,57,648	1/1:5,21:25:26.86:543,27,0	0/0:29,0:29:81.25:0,81,977	1/1:0,9:9:24.04:232,24,0
chr10	84662747	.	C	CCTT	13704.18	PASS	AB=0.563;AC=29;AF=0.518;AN=56;BaseQRankSum=-9.468;DP=427;FS=19.739;HRun=0;HaplotypeScore=59.3457;InbreedingCoeff=0.9119;MQ=64.63;MQ0=0;MQRankSum=-3.278;QD=52.51;ReadPosRankSum=-2.070;VQSLOD=4.1552;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,32:37:78.27:1793,78,0	1/1:0,6:6:15.05:345,15,0	0/0:5,0:4:9.03:0,9,153	0/0:7,0:6:15.02:0,15,226	0/0:19,0:19:57.18:0,57,938	0/0:21,0:21:57.18:0,57,946	1/1:0,11:12:33.11:758,33,0	1/1:9,21:31:87.27:1817,87,0	0/0:13,0:13:30.08:0,30,483	1/1:2,14:16:45.12:972,45,0	1/1:2,17:20:51.09:1040,51,0	0/0:8,0:8:24.08:0,24,409	0/0:11,0:11:33.11:0,33,562	0/0:11,0:11:33.11:0,33,559	0/0:9,0:9:27.09:0,27,460	0/1:2,6:9:30.10:392,0,30	1/1:1,28:29:66.23:1520,66,0	0/0:18,0:18:54.14:0,54,890	1/1:4,4:7:15.02:297,15,0	1/1:1,16:18:48.13:1057,48,0	1/1:2,22:24:63.22:1450,63,0	1/1:4,5:10:20.99:383,21,0	0/0:8,0:8:24.08:0,24,409	0/0:23,0:23:69.24:0,69,1176	0/0:13,0:13:36.11:0,36,590	1/1:1,9:10:30.09:637,30,0	1/1:1,15:18:33.11:760,33,0	1/1:4,8:12:21.07:483,21,0
chr10	84663175	.	C	CT	779.41	PASS	AB=0.545;AC=5;AF=0.089;AN=56;BaseQRankSum=2.609;DP=531;FS=7.473;HRun=11;HaplotypeScore=64.5786;InbreedingCoeff=0.6082;MQ=64.06;MQ0=0;MQRankSum=-0.187;QD=11.46;ReadPosRankSum=-0.018;VQSLOD=2.7759;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,2:42:76.82:390,77,0	0/0:6,0:4:11.95:0,12,91	0/0:6,0:7:10.57:0,11,56	0/0:9,0:11:21.63:0,22,134	0/0:21,0:23:42.83:0,43,305	0/0:15,1:16:5.39:0,5,223	0/0:22,0:22:29.80:0,30,227	0/0:27,0:27:26.13:0,26,304	0/0:13,0:14:25.90:0,26,192	0/0:18,0:18:41.83:0,42,325	0/0:13,0:12:20.89:0,21,161	0/0:14,0:14:26.15:0,26,208	0/0:22,0:23:58.81:0,59,447	0/0:14,0:14:32.86:0,33,255	0/0:19,0:20:46.83:0,47,354	0/0:18,1:19:17.34:0,17,318	0/0:40,0:40:77.61:0,78,600	0/0:30,0:30:77.68:0,78,603	0/0:17,0:17:38.82:0,39,302	0/0:15,0:17:14.61:0,15,242	0/0:23,1:24:47:0,47,467	0/0:14,1:15:2.42:0,2,202	0/0:16,0:16:29.83:0,30,232	0/0:24,1:25:29.27:0,29,406	0/0:12,0:14:28.82:0,29,207	1/1:4,16:19:1.61:371,2,0	0/0:16,0:18:39.89:0,40,288	0/1:1,5:6:5.20:134,0,5
chr10	84663359	.	TGG	T	3431.47	PASS	AB=0.893;AC=43;AF=0.768;AN=56;BaseQRankSum=1.579;DP=425;FS=146.705;HRun=2;HaplotypeScore=76.2352;InbreedingCoeff=0.3389;MQ=55.14;MQ0=28;MQRankSum=-1.820;QD=9.64;ReadPosRankSum=-2.718;VQSLOD=0.0149;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,1:18:11.43:11,0,250	1/1:2,1:3:7.57:71,8,0	0/0:37,0:6:8.37:0,8,83	0/1:50,0:17:6.99:7,0,168	1/1:10,4:12:21.87:164,22,0	1/1:3,5:7:14.53:162,15,0	1/1:9,9:17:1.26:348,1,0	1/1:27,7:33:20.47:247,20,0	0/0:4,0:3:0.78:0,1,13	1/1:10,3:11:18.93:155,19,0	1/1:16,0:14:17.74:104,18,0	0/1:5,4:8:3.53:79,0,4	1/1:8,6:14:11.53:244,12,0	1/1:5,5:10:7.28:105,7,0	1/1:5,1:7:5.62:64,6,0	1/1:7,5:12:34.46:326,34,0	1/1:13,4:15:24.85:202,25,0	1/1:6,6:11:7.18:282,7,0	0/1:20,0:17:4.84:108,0,5	1/1:10,2:12:10.05:127,10,0	1/1:6,1:5:12.45:120,12,0	1/1:6,1:7:13.98:76,14,0	1/1:8,3:10:26.38:193,26,0	1/1:7,0:5:4.72:32,5,0	0/1:10,2:12:0.30:120,0,0	0/0:17,0:13:4.34:0,4,339	1/1:20,0:19:3.60:84,4,0	0/0:10,0:10:9.38:0,9,200
chr10	84663360	.	GGTT	G	3111.07	PASS	AB=0.990;AC=37;AF=0.661;AN=56;BaseQRankSum=-3.427;DP=416;FS=7.432;HRun=0;HaplotypeScore=80.7834;InbreedingCoeff=0.0120;MQ=55.05;MQ0=28;MQRankSum=1.827;QD=9.12;ReadPosRankSum=-3.384;VQSLOD=1.1135;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:37.92:0,38,300	1/1:1,2:3:8.97:88,9,0	0/0:38,0:6:8.72:0,9,74	0/1:51,0:16:21.48:21,0,71	0/1:14,0:12:6.42:86,0,6	1/1:8,0:7:9.16:51,9,0	1/1:18,0:17:6.43:241,6,0	1/1:31,0:32:11.37:415,11,0	0/1:4,0:3:13.61:21,0,14	1/1:10,2:11:20:179,20,0	1/1:9,3:13:26.98:266,27,0	0/1:9,0:8:8.69:48,0,9	0/1:13,0:13:29.73:91,0,30	0/0:10,0:10:0.92:0,1,48	0/1:7,0:7:23.73:28,0,24	1/1:8,3:12:33.48:358,33,0	1/1:15,2:15:27.09:271,27,0	1/1:10,1:10:17.42:177,17,0	0/1:20,0:17:23.41:123,0,23	0/1:12,0:12:31.93:110,0,32	0/1:7,0:5:1.12:77,0,1	1/1:7,0:7:0.04:115,0,0	0/1:11,0:10:17.20:61,0,17	1/1:8,0:5:8.59:69,9,0	1/1:11,0:11:1.23:93,1,0	0/1:15,2:13:20.91:21,0,244	1/1:20,0:19:10.01:267,10,0	0/0:5,0:7:9.99:0,10,87
chr10	84663365	.	T	TG	455.85	PASS	AB=0.913;AC=7;AF=0.125;AN=56;BaseQRankSum=-2.345;DP=407;FS=0.788;HRun=0;HaplotypeScore=80.3067;InbreedingCoeff=-0.1199;MQ=50.73;MQ0=27;MQRankSum=3.869;QD=3.33;ReadPosRankSum=-0.386;VQSLOD=3.1567;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:46.79:0,47,329	0/0:4,0:4:7.53:0,8,37	0/1:37,0:5:5:5,0,6	0/0:48,0:14:6.15:0,6,75	0/0:13,0:11:30.36:0,30,198	0/0:10,0:9:19.35:0,19,113	0/0:17,0:16:45.77:0,46,313	0/1:32,0:32:99:178,0,157	0/0:3,0:2:3:0,3,27	0/0:14,0:12:8.32:0,8,32	0/0:14,0:12:4.86:0,5,32	0/0:9,0:8:17.72:0,18,134	0/0:12,0:12:35.39:0,35,238	0/0:10,0:10:26.93:0,27,227	0/0:6,0:6:17.32:0,17,114	0/1:12,0:12:8.34:8,0,53	0/0:17,0:13:11.47:0,11,82	0/0:11,0:10:11.79:0,12,158	0/1:13,8:19:90.49:134,0,90	0/1:6,6:12:37.60:79,0,38	0/0:6,0:4:0.66:0,1,36	0/1:7,0:7:10.42:44,0,10	0/0:12,0:11:31:0,31,211	0/0:6,0:3:5.90:0,6,42	0/0:10,0:10:20.80:0,21,155	0/0:18,0:14:35.28:0,35,295	0/1:16,0:15:22.49:130,0,22	0/0:8,0:8:14.98:0,15,132
chr10	84663453	.	TG	T	2974.46	PASS	AB=1.000;AC=51;AF=0.981;AN=52;BaseQRankSum=-3.165;DP=164;FS=0.000;HRun=2;HaplotypeScore=26.9020;InbreedingCoeff=-0.1140;MQ=46.86;MQ0=9;MQRankSum=-0.280;QD=18.83;ReadPosRankSum=2.355;VQSLOD=3.5498;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:1:3.01:39,3,0	1/1:0,6:2:3.01:39,3,0	1/1:9,0:1:3:25,3,0	0/1:25,0:8:32.94:49,0,33	1/1:1,4:5:6.02:78,6,0	1/1:1,3:4:9.03:117,9,0	1/1:0,7:6:15.05:194,15,0	1/1:1,3:3:9.03:117,9,0	1/1:0,2:2:6.02:78,6,0	1/1:1,12:10:24.08:311,24,0	1/1:0,5:5:12.04:155,12,0	1/1:0,2:2:3.01:39,3,0	1/1:0,3:2:6.02:77,6,0	1/1:1,6:7:18.06:228,18,0	1/1:0,3:2:6.02:78,6,0	1/1:0,5:3:6.02:78,6,0	./.	1/1:0,7:6:18.06:234,18,0	1/1:0,2:2:6.02:78,6,0	1/1:0,4:4:6.02:78,6,0	1/1:0,4:3:2.99:39,3,0	1/1:0,3:3:6.02:78,6,0	1/1:0,2:2:3.01:39,3,0	1/1:0,2:2:6.02:78,6,0	1/1:0,3:3:6.02:78,6,0	1/1:0,14:10:30.10:389,30,0	1/1:2,13:15:21.07:272,21,0	./.
chr10	84663469	.	GC	G	394.35	PASS	AB=1.000;AC=27;AF=0.519;AN=52;BaseQRankSum=0.785;DP=181;FS=11.152;HRun=11;HaplotypeScore=36.6638;InbreedingCoeff=0.4982;MQ=50.75;MQ0=6;MQRankSum=-3.701;QD=4.15;ReadPosRankSum=1.146;VQSLOD=-0.2248;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:2:2.04:6,2,0	1/1:1,0:1:2.04:6,2,0	0/0:16,0:2:5.67:0,6,34	0/0:16,1:8:8.95:0,9,86	0/0:8,0:8:9.02:0,9,95	0/0:5,0:5:11.95:0,12,112	1/1:3,0:5:2.74:12,3,0	1/1:1,3:4:8.99:74,9,0	0/0:2,0:2:3.01:0,3,32	1/1:3,0:10:10.17:30,10,0	1/1:2,0:4:2.04:6,2,0	0/0:2,0:2:0:0,0,0	0/0:4,0:3:3.01:0,3,32	0/1:7,0:7:15.65:16,0,41	0/0:3,0:2:2.90:0,3,16	1/1:1,0:2:2.74:12,3,0	0/0:2,0:3:2.60:0,3,10	0/0:11,0:10:23.98:0,24,222	1/1:1,4:5:8.96:70,9,0	1/1:1,4:5:8.79:63,9,0	./.	1/1:2,2:4:5.99:49,6,0	./.	0/0:2,0:2:3.01:0,3,32	0/0:5,0:5:0:0,0,0	1/1:4,0:10:12.21:36,12,0	1/1:4,9:12:20.76:165,21,0	1/1:2,0:2:2.04:6,2,0
chr10	84663905	.	ACT	A	6780.60	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=8.173;DP=611;FS=2.963;HRun=0;HaplotypeScore=79.6276;InbreedingCoeff=0.9972;MQ=87.77;MQ0=2;MQRankSum=-2.637;QD=38.31;ReadPosRankSum=3.581;VQSLOD=6.7275;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,45:45:99:1743,120,0	1/1:0,5:5:15.05:221,15,0	0/0:16,0:16:45.15:0,45,825	0/0:29,0:28:68.33:0,68,995	0/0:14,0:14:42.14:0,42,786	0/0:20,0:20:60.21:0,60,1123	0/0:30,0:30:87.30:0,87,1629	0/0:22,0:22:66.23:0,66,1236	0/0:19,0:19:54.19:0,54,1011	1/1:0,20:20:60.19:865,60,0	1/1:2,14:16:36.12:529,36,0	0/0:16,0:15:45.15:0,45,836	0/0:16,0:16:48.16:0,48,896	0/0:26,0:26:72.23:0,72,1305	0/0:22,0:22:66.23:0,66,1225	1/1:0,18:17:48.16:707,48,0	1/1:0,35:35:93.31:1370,93,0	0/0:23,0:23:63.22:0,63,1180	0/0:18,0:18:51.16:0,51,921	0/0:19,0:19:51.17:0,51,949	0/0:45,0:45:99:0,135,2498	0/0:21,0:21:60.21:0,60,1111	0/0:11,0:11:33.11:0,33,617	0/0:28,0:28:81.28:0,81,1517	0/0:17,0:17:51.17:0,51,955	1/1:1,23:23:63.19:905,63,0	0/0:22,0:21:63.22:0,63,1172	1/1:0,13:13:30.10:442,30,0
chr10	84665756	.	G	GA	6454.19	PASS	AB=0.977;AC=29;AF=0.518;AN=56;BaseQRankSum=-0.544;DP=485;FS=1.310;HRun=7;HaplotypeScore=62.7522;InbreedingCoeff=0.9163;MQ=80.62;MQ0=9;MQRankSum=0.535;QD=23.38;ReadPosRankSum=0.844;VQSLOD=4.9702;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:20:45.14:543,45,0	1/1:1,13:14:32.99:378,33,0	0/0:55,0:22:21.31:0,21,150	0/1:40,0:22:3.70:4,0,80	0/0:15,0:15:39.05:0,39,372	0/0:16,0:16:42.07:0,42,405	0/0:9,0:9:24.04:0,24,232	1/1:7,11:19:37.75:389,38,0	0/0:7,0:7:18.03:0,18,174	1/1:2,16:18:45.11:528,45,0	1/1:2,20:22:59.97:665,60,0	0/0:13,0:13:33.02:0,33,304	0/0:8,0:8:21.03:0,21,202	0/0:10,0:10:26.98:0,27,244	0/0:13,0:13:39.04:0,39,367	1/1:0,9:9:21.06:254,21,0	1/1:0,18:18:48.15:579,48,0	0/0:22,0:22:60.03:0,60,563	1/1:8,19:28:63.03:687,63,0	1/1:2,16:19:51.16:605,51,0	1/1:0,2:2:3.01:36,3,0	1/1:2,5:7:11.91:95,12,0	0/0:14,0:14:39.05:0,39,371	0/0:6,0:6:15.02:0,15,145	0/0:19,0:19:51.07:0,51,489	1/1:3,21:24:63.19:757,63,0	1/1:3,13:16:39.12:463,39,0	1/1:2,15:17:39.12:471,39,0
chr10	84669427	.	CTT	C	1895.94	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=1.182;DP=371;FS=0.523;HRun=12;HaplotypeScore=62.2328;InbreedingCoeff=0.9031;MQ=78.59;MQ0=7;MQRankSum=-1.200;QD=18.96;ReadPosRankSum=3.679;VQSLOD=2.7446;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,7:11:25.87:246,26,0	1/1:1,2:3:6:61,6,0	0/0:19,0:10:10.65:0,11,98	0/0:20,0:12:20.26:0,20,125	0/0:24,0:24:57.07:0,57,716	0/0:16,0:16:36.08:0,36,454	0/0:7,0:7:21.05:0,21,290	0/0:8,0:20:39.64:0,40,204	0/0:15,0:15:42.11:0,42,568	1/1:6,1:7:8.97:87,9,0	1/1:2,16:17:32.58:311,33,0	0/0:5,0:6:17.42:0,17,215	0/0:6,0:6:15.05:0,15,212	0/0:10,0:11:30.08:0,30,388	0/0:11,0:11:24.04:0,24,330	1/1:0,8:8:18.04:183,18,0	1/1:2,26:29:58.68:566,59,0	0/0:27,0:28:77.65:0,78,1005	0/0:9,0:13:12.98:0,13,62	0/0:6,1:20:5.79:0,6,113	0/0:4,0:7:8.49:0,8,59	0/0:2,0:4:7.99:0,8,43	0/0:13,0:13:25.89:0,26,344	0/0:3,0:3:9.02:0,9,114	0/0:12,0:13:35.39:0,35,353	1/1:2,5:7:21.04:213,21,0	0/0:6,0:14:23.77:0,24,166	1/1:2,14:16:42.09:427,42,0
chr10	84669461	.	C	CAA	652.15	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=0.278;DP=356;FS=1.533;HRun=10;HaplotypeScore=63.8572;InbreedingCoeff=0.7590;MQ=79.38;MQ0=1;MQRankSum=-2.248;QD=10.69;ReadPosRankSum=-0.652;VQSLOD=0.9790;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:15:27.45:96,27,0	0/0:2,0:2:6.01:0,6,61	0/0:21,0:13:23.13:0,23,194	0/1:21,0:13:6.69:7,0,46	0/0:23,0:23:51.02:0,51,517	0/0:17,0:17:42.04:0,42,425	0/0:6,0:6:11.99:0,12,122	0/0:16,0:16:33.02:0,33,336	0/0:12,0:12:35.66:0,36,339	0/0:12,0:13:23.76:0,24,296	0/0:18,0:18:45.10:0,45,458	0/0:9,0:9:27.06:0,27,274	0/0:7,0:7:15:0,15,152	0/0:12,0:12:33.02:0,33,319	0/0:10,0:10:21.01:0,21,213	0/0:8,0:9:11.79:0,12,174	0/0:29,0:29:44.98:0,45,449	0/0:22,0:22:57.10:0,57,579	0/0:9,0:9:24.05:0,24,244	0/0:16,0:16:33.05:0,33,336	0/0:5,0:5:6.01:0,6,61	0/0:5,0:5:9.01:0,9,91	0/0:7,0:7:18.04:0,18,183	0/0:4,0:5:14.77:0,15,134	0/0:12,0:12:36.06:0,36,358	1/1:5,8:13:27.08:381,27,0	0/0:9,0:9:21.04:0,21,213	1/1:5,6:12:24.02:313,24,0
chr10	84670717	.	GC	G	1984.69	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=8.977;DP=589;FS=1.530;HRun=7;HaplotypeScore=59.8214;InbreedingCoeff=0.9572;MQ=82.82;MQ0=0;MQRankSum=-4.547;QD=27.19;ReadPosRankSum=0.655;VQSLOD=4.3605;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,50:50:99:1500,147,0	0/0:4,0:4:12.04:0,12,149	0/0:21,0:20:51.15:0,51,621	0/0:19,1:21:9.39:0,9,435	0/0:15,0:15:45.13:0,45,550	0/0:16,0:16:45.14:0,45,566	0/0:34,0:34:96.29:0,96,1194	0/0:22,0:22:63.19:0,63,769	0/0:23,0:23:63.18:0,63,777	0/0:23,0:23:63.19:0,63,772	0/0:9,0:9:27.09:0,27,340	0/0:20,0:20:57.17:0,57,702	0/0:19,0:19:57.07:0,57,669	0/0:16,0:16:45.13:0,45,552	0/0:23,0:23:60.19:0,60,754	0/0:23,0:23:60.19:0,60,755	0/0:34,0:34:99:0,99,1230	0/0:27,0:27:75.19:0,75,893	0/0:22,0:22:63.18:0,63,764	0/0:18,0:18:48.15:0,48,604	0/0:33,0:33:93.30:0,93,1170	0/0:21,0:21:60.19:0,60,754	0/0:16,0:16:38.90:0,39,463	0/0:23,0:23:63.20:0,63,793	0/0:13,0:13:39.12:0,39,489	1/1:3,20:23:60.12:606,60,0	0/0:19,0:19:57.17:0,57,700	./.
chr10	84670831	.	T	TGG	1256.19	PASS	AB=0.550;AC=5;AF=0.089;AN=56;BaseQRankSum=2.918;DP=565;FS=10.835;HRun=7;HaplotypeScore=69.7202;InbreedingCoeff=0.7956;MQ=83.37;MQ0=0;MQRankSum=-2.898;QD=18.47;ReadPosRankSum=2.048;VQSLOD=0.6446;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:30:69.23:1117,69,0	0/0:10,0:10:24.07:0,24,280	0/0:17,0:17:48.10:0,48,546	0/0:20,0:20:42.06:0,42,468	0/0:21,0:21:57.16:0,57,664	0/0:20,0:20:54.14:0,54,618	0/0:24,0:25:62.91:0,63,701	0/0:28,0:27:66.14:0,66,747	0/0:17,0:17:45.12:0,45,524	0/0:22,0:22:57.16:0,57,664	0/0:15,0:15:45.12:0,45,513	0/0:26,0:26:75.22:0,75,874	0/0:17,0:17:48.10:0,48,536	0/0:14,0:14:39.11:0,39,455	0/0:26,0:26:75.22:0,75,874	0/0:16,0:16:42.12:0,42,489	0/0:27,0:27:78.23:0,78,908	0/0:32,0:32:90.21:0,90,1021	0/0:21,0:21:57.15:0,57,654	0/0:14,0:14:39.12:0,39,454	0/0:23,0:23:57.16:0,57,664	0/0:13,0:13:33.10:0,33,384	0/0:17,0:17:42.10:0,42,478	0/0:20,0:20:60.18:0,60,698	0/0:18,0:18:48.13:0,48,559	0/1:2,0:11:11.74:50,0,12	0/0:18,0:18:51.15:0,51,594	1/1:0,0:27:62.38:219,62,0
chr10	84673101	.	T	TA	1424.89	PASS	AB=0.797;AC=17;AF=0.304;AN=56;BaseQRankSum=2.129;DP=571;FS=1.492;HRun=14;HaplotypeScore=71.8710;InbreedingCoeff=0.5041;MQ=68.55;MQ0=5;MQRankSum=-1.116;QD=5.54;ReadPosRankSum=-2.077;VQSLOD=2.0731;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:32:17.04:85,17,0	0/1:1,6:7:1.27:112,0,1	0/0:40,0:21:7.22:0,7,41	0/1:21,0:9:3.58:4,0,9	0/1:18,2:20:6.23:6,0,220	0/0:23,0:24:40.23:0,40,250	0/0:18,0:19:46.24:0,46,290	0/0:24,0:24:43.91:0,44,276	0/0:19,0:19:35.56:0,36,216	1/1:4,13:17:35.95:305,36,0	0/1:7,13:21:18.27:166,0,18	0/1:15,0:14:2.84:3,0,110	0/0:19,0:19:29.80:0,30,219	0/0:10,0:11:13.65:0,14,82	0/0:19,0:19:17.03:0,17,209	1/1:4,13:17:15.47:177,15,0	0/1:13,19:34:5.33:287,0,5	0/0:18,0:17:34.40:0,34,218	0/0:15,0:19:6.01:0,6,116	0/0:23,0:23:47.18:0,47,307	0/0:7,0:7:8.84:0,9,56	0/0:13,0:14:34.52:0,35,217	0/0:10,0:10:17.65:0,18,115	0/0:17,0:19:45.27:0,45,272	0/1:10,1:11:9.46:9,0,77	1/1:17,0:28:49.76:281,50,0	0/0:26,2:29:47.52:0,48,417	1/1:5,0:30:34.09:171,34,0
chr10	84673974	.	CAAT	C	6406.69	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=5.595;DP=691;FS=9.442;HRun=0;HaplotypeScore=142.2235;InbreedingCoeff=0.9984;MQ=81.50;MQ0=0;MQRankSum=-9.694;QD=40.81;ReadPosRankSum=3.615;VQSLOD=5.6956;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:69.24:1127,69,0	1/1:0,11:11:26.71:440,27,0	0/0:25,0:25:75.25:0,75,1502	0/0:16,0:16:39.13:0,39,780	0/0:22,0:22:66.23:0,66,1463	0/0:15,0:15:39.13:0,39,871	0/0:34,0:34:96.32:0,96,2104	0/0:20,0:20:54.19:0,54,1197	0/0:26,0:26:75.26:0,75,1670	1/1:3,23:26:78.25:1228,78,0	1/1:4,15:19:33.11:539,33,0	0/0:36,0:36:90.75:0,91,1909	0/0:29,0:29:45.63:0,46,971	0/0:43,0:43:99:0,126,2753	0/0:21,0:21:57.20:0,57,1243	1/1:5,13:18:45.15:729,45,0	1/1:4,26:30:78.27:1268,78,0	0/0:36,0:36:99:0,105,2315	0/0:23,0:23:66.22:0,66,1426	0/0:16,0:16:45.15:0,45,1005	0/0:51,0:51:99:0,126,2790	0/0:17,0:17:48.16:0,48,1072	0/0:18,0:18:51.18:0,51,1109	0/0:41,0:41:99:0,114,2500	0/0:24,0:24:69.23:0,69,1476	1/1:1,16:17:48.16:783,48,0	0/0:21,0:21:60.17:0,60,1254	1/1:1,6:7:18.06:294,18,0
chr10	84674023	.	GA	G	8854.20	PASS	AB=0.971;AC=54;AF=0.964;AN=56;BaseQRankSum=1.491;DP=631;FS=13.417;HRun=1;HaplotypeScore=135.3741;InbreedingCoeff=-0.0415;MQ=74.41;MQ0=0;MQRankSum=-2.010;QD=14.03;ReadPosRankSum=6.500;VQSLOD=2.8967;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:86.53:584,87,0	1/1:17,0:17:46.44:296,46,0	0/1:12,0:11:22.59:121,0,23	0/1:15,0:16:17.62:132,0,18	1/1:24,0:24:36.58:343,37,0	1/1:26,0:26:61.39:361,61,0	1/1:28,0:28:48.98:373,49,0	1/1:25,0:25:59.75:313,60,0	1/1:23,0:23:58.63:352,59,0	1/1:24,0:24:60.14:374,60,0	1/1:18,0:18:41.36:288,41,0	1/1:26,0:26:54.59:307,55,0	1/1:2,23:25:5.59:64,6,0	1/1:30,0:30:81.62:472,82,0	1/1:16,0:16:40.79:230,41,0	1/1:10,0:10:29.77:223,30,0	1/1:29,0:29:74.12:480,74,0	1/1:42,0:42:88.54:604,89,0	1/1:21,0:21:48.78:270,49,0	1/1:20,0:20:27.66:269,28,0	1/1:40,0:40:93.44:552,93,0	1/1:14,0:14:37.89:214,38,0	1/1:15,0:15:41.06:248,41,0	1/1:33,0:33:85.19:495,85,0	1/1:14,0:14:15.68:173,16,0	1/1:19,0:19:48.12:295,48,0	1/1:21,0:21:48.78:293,49,0	1/1:8,0:8:20.45:127,20,0
chr10	84676250	.	CA	C	736.36	PASS	AB=0.783;AC=10;AF=0.192;AN=52;BaseQRankSum=0.840;DP=432;FS=40.689;HRun=9;HaplotypeScore=102.9681;InbreedingCoeff=0.7182;MQ=43.24;MQ0=11;MQRankSum=-2.710;QD=8.87;ReadPosRankSum=4.061;VQSLOD=-0.3795;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:14.99:0,15,128	1/1:4,2:6:2.98:28,3,0	./.	./.	0/0:24,0:24:33.07:0,33,362	0/0:11,0:11:27.07:0,27,304	0/0:20,0:17:27.63:0,28,258	0/0:30,0:27:48.50:0,49,481	0/0:13,0:13:24.95:0,25,271	1/1:3,12:13:33.02:302,33,0	1/1:8,10:18:23.99:219,24,0	0/0:25,0:25:39.08:0,39,423	0/0:14,0:13:27.06:0,27,300	0/0:18,0:16:30.55:0,31,335	0/0:18,1:19:20.67:0,21,478	1/1:6,7:13:24.01:219,24,0	0/1:12,11:22:3.94:113,0,4	0/0:18,0:19:23.23:0,23,386	0/0:19,0:18:33.34:0,33,273	0/0:13,0:12:20.55:0,21,212	0/0:12,0:12:16.49:0,16,209	0/0:4,0:4:9.03:0,9,101	0/1:7,1:8:12.40:12,0,111	0/0:21,0:21:27.47:0,27,277	0/0:11,0:11:24.07:0,24,277	0/0:19,1:18:9.31:0,9,166	0/0:12,0:11:27.28:0,27,227	0/0:20,0:18:38.25:0,38,300
chr10	84677375	.	CT	C	2182.28	PASS	AB=0.830;AC=27;AF=0.482;AN=56;BaseQRankSum=0.941;DP=472;FS=3.840;HRun=13;HaplotypeScore=68.5498;InbreedingCoeff=0.3971;MQ=62.27;MQ0=8;MQRankSum=0.332;QD=7.79;ReadPosRankSum=1.880;VQSLOD=2.8658;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,45:60:98.26:720,98,0	1/1:2,0:2:2.94:20,3,0	0/0:18,0:12:2.94:0,3,18	0/1:12,1:11:24.10:26,0,24	0/0:11,0:12:23.87:0,24,218	0/0:13,0:13:29.96:0,30,273	1/1:5,0:17:21.23:61,21,0	1/1:8,14:19:2.62:172,3,0	0/1:10,3:14:19.91:20,0,132	1/1:6,9:16:22.53:155,23,0	0/1:5,1:5:15.90:16,0,23	0/0:18,0:18:24.02:0,24,224	0/1:11,1:12:16.15:16,0,73	0/0:18,0:17:11:0,11,185	0/0:22,0:23:26.97:0,27,242	0/1:7,4:10:2.58:76,0,3	1/1:6,18:25:15.83:269,16,0	0/0:23,2:24:16.34:0,16,298	1/1:3,13:15:38.77:284,39,0	1/1:2,2:4:2.90:22,3,0	1/1:6,15:22:28.83:203,29,0	1/1:3,9:12:23.52:175,24,0	0/0:10,0:8:18.03:0,18,175	0/0:36,0:36:53.65:0,54,489	0/0:7,0:8:17.77:0,18,141	0/1:8,6:13:25.47:103,0,25	0/0:6,4:9:0:0,0,0	0/1:9,2:10:20.12:35,0,20
chr10	84678970	.	C	CA	532.18	PASS	AB=0.951;AC=26;AF=0.542;AN=48;BaseQRankSum=0.078;DP=239;FS=3.397;HRun=16;HaplotypeScore=57.4254;InbreedingCoeff=0.2680;MQ=29.89;MQ0=31;MQRankSum=-2.951;QD=3.24;ReadPosRankSum=-1.493;VQSLOD=-0.5200;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,2:9:11.67:75,12,0	1/1:1,0:2:2.84:14,3,0	./.	0/1:31,0:3:0:0,0,0	0/1:8,1:9:15.91:16,0,25	0/0:12,0:10:20.23:0,20,111	./.	1/1:5,1:3:5.83:38,6,0	0/0:4,0:3:8.51:0,9,44	1/1:4,3:8:2.98:75,3,0	1/1:4,0:5:6.60:31,7,0	0/1:6,0:5:8.35:8,0,36	0/0:7,0:7:15.04:0,15,82	0/0:4,0:3:7.38:0,7,37	0/1:10,0:9:2.27:2,0,38	1/1:6,1:5:11.52:66,12,0	1/1:4,2:7:11.30:75,11,0	0/1:10,0:8:12.06:12,0,27	0/1:9,1:7:24.31:28,0,24	1/1:2,3:5:8.96:69,9,0	./.	./.	0/0:2,0:1:2.92:0,3,17	0/0:7,0:5:4.91:0,5,22	0/0:12,0:9:14.38:0,14,82	0/1:6,1:8:3.02:43,0,3	1/1:6,5:13:7.12:124,7,0	0/1:6,0:5:10.44:10,0,17
chr10	84679021	.	AAAAAAAAGAGAAAAAAAAAG	A	376.49	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=2.252;DP=428;FS=7.847;HRun=0;HaplotypeScore=155.7397;InbreedingCoeff=0.5242;MQ=36.04;MQ0=35;MQRankSum=-1.608;QD=5.02;ReadPosRankSum=-4.241;VQSLOD=0.2872;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:12.60:13,0,48	1/1:4,0:3:3.01:93,3,0	0/0:81,0:13:17.50:0,18,405	0/0:97,0:10:14.86:0,15,192	0/0:10,0:10:26.30:0,26,1094	0/0:17,0:16:26.92:0,27,1310	0/0:5,0:5:6.01:0,6,58	0/0:15,0:13:27.02:0,27,753	0/0:4,0:4:12.04:0,12,406	1/1:7,0:7:3.01:90,3,0	1/1:6,6:10:6.01:62,6,0	0/0:8,0:8:17.32:0,17,1064	0/0:15,0:14:29.38:0,29,1147	0/0:10,0:8:15.04:0,15,569	0/0:9,0:8:15.05:0,15,645	1/1:6,0:5:5.98:84,6,0	1/1:9,0:9:4.33:25,4,0	0/0:10,0:9:27.09:0,27,1602	0/0:16,0:12:30.06:0,30,778	0/0:12,0:11:17.41:0,17,999	0/0:4,0:3:6.02:0,6,216	0/0:1,0:1:3.01:0,3,121	0/0:1,0:1:3.01:0,3,107	0/0:6,0:4:9.01:0,9,454	0/0:12,0:12:33.10:0,33,1723	0/1:19,0:18:9.91:148,0,10	0/0:19,0:16:7.75:0,8,892	1/1:6,0:4:4.66:13,5,0
chr10	84679026	.	AAAGAG	A	664.47	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=6.367;DP=431;FS=35.580;HRun=0;HaplotypeScore=84.2474;InbreedingCoeff=0.4039;MQ=36.32;MQ0=35;MQRankSum=-5.157;QD=5.23;ReadPosRankSum=-3.276;VQSLOD=-0.6456;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,8:12:10.80:98,11,0	0/1:4,0:3:0.19:0,0,4	0/0:85,0:12:18.62:0,19,278	0/0:101,0:10:14.70:0,15,180	0/1:11,0:11:5.10:5,0,445	0/0:18,0:17:26.09:0,26,650	1/1:5,0:5:5.99:66,6,0	0/0:18,0:15:32.72:0,33,514	0/0:4,0:4:7.44:0,7,162	1/1:6,0:6:3.07:11,3,0	0/1:9,0:8:0:1,0,0	0/0:9,0:9:19.97:0,20,481	0/0:15,0:14:12.74:0,13,540	0/0:9,0:8:17.42:0,17,364	0/0:9,0:8:9.68:0,10,219	0/1:5,0:4:5.33:35,0,5	1/1:11,0:10:14.87:90,15,0	0/0:11,0:10:30.10:0,30,808	0/1:17,0:12:18.29:18,0,388	0/1:12,0:11:28.47:28,0,406	0/0:4,0:3:6.02:0,6,106	0/0:1,0:1:3.01:0,3,62	0/0:1,0:1:3.01:0,3,31	0/0:5,0:4:8.91:0,9,185	0/0:12,0:12:20.86:0,21,578	1/1:12,0:11:24.46:236,24,0	0/1:19,0:16:99:224,0,203	1/1:4,0:2:5.06:21,5,0
chr10	84679028	.	AGAG	A	956.92	PASS	AB=0.908;AC=20;AF=0.370;AN=54;BaseQRankSum=6.436;DP=412;FS=38.694;HRun=0;HaplotypeScore=70.6232;InbreedingCoeff=0.2971;MQ=40.66;MQ0=34;MQRankSum=-5.673;QD=7.36;ReadPosRankSum=-2.334;VQSLOD=0.2227;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:8.57:70,9,0	1/1:3,0:2:4.04:12,4,0	0/0:87,1:12:18.63:0,19,268	0/0:102,0:12:14.75:0,15,173	0/1:10,0:11:17.28:17,0,310	0/0:14,0:14:26.63:0,27,475	1/1:3,0:3:6.02:73,6,0	0/0:18,0:15:31.55:0,32,365	0/0:3,1:4:5.19:0,5,112	1/1:2,0:2:1.55:4,2,0	0/1:7,0:7:0:0,0,0	0/0:7,0:7:20.66:0,21,362	0/1:12,2:13:1.57:2,0,358	0/0:8,1:8:9.27:0,9,276	0/1:9,0:8:6.50:7,0,141	0/1:4,1:4:3.84:44,0,4	1/1:7,1:7:14.84:114,15,0	0/0:11,0:10:30.10:0,30,591	0/1:16,0:11:56.29:56,0,219	0/1:10,2:11:40.12:40,0,248	0/0:4,0:3:6.02:0,6,75	0/0:1,0:1:3.01:0,3,37	0/0:1,0:1:3:0,3,28	0/0:4,0:3:8.82:0,9,134	0/0:11,0:11:19.24:0,19,428	1/1:1,10:10:24.55:358,25,0	0/1:13,5:16:99:322,0,123	./.
chr10	84679031	.	G	GA	984.96	PASS	AB=0.909;AC=25;AF=0.463;AN=54;BaseQRankSum=0.905;DP=429;FS=14.336;HRun=9;HaplotypeScore=67.9782;InbreedingCoeff=0.6003;MQ=44.46;MQ0=32;MQRankSum=-0.918;QD=4.74;ReadPosRankSum=-1.048;VQSLOD=-0.0537;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:2.72:0,3,18	1/1:3,0:2:4.22:24,4,0	0/1:93,0:14:5.46:5,0,43	0/0:109,0:12:10.15:0,10,68	0/0:12,0:12:16.77:0,17,135	0/0:13,0:13:23.96:0,24,208	1/1:3,0:3:0.47:1,0,0	1/1:7,14:19:38.96:404,39,0	0/0:4,0:4:7.23:0,7,54	1/1:2,0:2:2.84:14,3,0	0/1:7,0:7:0:0,0,0	0/0:8,0:8:18.46:0,18,157	0/0:13,0:12:17.30:0,17,144	0/0:10,0:9:17.79:0,18,152	0/0:9,0:8:11.52:0,12,79	1/1:7,0:6:0.89:2,1,0	1/1:8,0:7:5.25:23,5,0	0/0:12,0:11:29.78:0,30,247	0/1:10,4:11:0.03:173,0,0	1/1:4,9:12:23.66:254,24,0	1/1:0,4:3:6.02:66,6,0	1/1:0,1:1:3.01:33,3,0	0/0:1,0:1:2.74:0,3,12	0/0:6,0:5:9.47:0,9,78	0/0:11,0:11:22.66:0,23,187	1/1:11,0:11:5.87:23,6,0	1/1:14,4:16:5.10:131,5,0	./.
chr10	84679572	.	C	CCCACCA	1572.77	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.781;DP=636;FS=3.259;HRun=0;HaplotypeScore=133.5364;InbreedingCoeff=0.9955;MQ=75.86;MQ0=0;MQRankSum=-7.305;QD=43.69;ReadPosRankSum=-2.800;VQSLOD=2.6948;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,14:36:54.10:1668,54,0	0/0:9,0:9:24.08:0,24,512	0/0:32,0:29:35.25:0,35,624	0/0:29,0:28:39.02:0,39,743	0/0:25,0:25:60.21:0,60,1283	0/0:17,0:17:30.09:0,30,600	0/0:28,0:28:66.23:0,66,1382	0/0:25,0:25:36.12:0,36,737	0/0:26,0:26:66.23:0,66,1370	0/0:27,0:27:69.21:0,69,1352	0/0:16,0:16:39.13:0,39,794	0/0:20,0:20:54.15:0,54,1025	0/0:22,0:22:54.17:0,54,1101	0/0:25,0:25:60.20:0,60,1231	0/0:22,0:22:45.13:0,45,881	0/0:18,0:18:51.18:0,51,1089	0/0:43,0:43:99:0,111,2279	0/0:16,0:16:33.11:0,33,684	0/0:15,0:15:36.09:0,36,640	0/0:14,0:14:39.12:0,39,779	0/0:24,0:24:50.31:0,50,911	0/0:27,0:27:72.22:0,72,1406	0/0:15,0:15:39.11:0,39,793	0/0:29,0:29:63.22:0,63,1347	0/0:23,0:23:63.21:0,63,1290	0/0:20,0:20:45.15:0,45,924	0/0:24,0:24:57.18:0,57,1163	0/0:9,0:9:27.09:0,27,577
chr10	84680224	.	CA	C	4324.97	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.428;DP=753;FS=5.040;HRun=3;HaplotypeScore=73.4525;InbreedingCoeff=0.9942;MQ=83.54;MQ0=0;MQRankSum=-2.406;QD=33.79;ReadPosRankSum=3.938;VQSLOD=5.4537;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,162,2254	1/1:2,6:8:14.78:186,15,0	0/0:26,0:26:69.67:0,70,947	0/0:26,0:26:72.24:0,72,1025	0/0:30,0:30:90.28:0,90,1257	0/0:30,0:30:84.24:0,84,1170	0/0:28,0:28:81.26:0,81,1147	0/0:29,0:29:84.22:0,84,1140	0/0:30,0:30:87.28:0,87,1236	1/1:1,17:18:54.16:655,54,0	1/1:0,16:16:42.13:520,42,0	0/0:23,0:23:63.21:0,63,907	0/0:26,0:26:78.22:0,78,1083	0/0:26,0:26:75.25:0,75,1080	0/0:36,0:36:99:0,108,1518	1/1:1,36:37:99:1254,102,0	1/1:0,49:49:99:1710,138,0	0/0:25,0:25:72.22:0,72,1017	0/0:20,0:20:57.18:0,57,799	0/0:17,0:17:51.14:0,51,696	0/0:45,0:45:99:0,129,1801	0/0:22,0:22:66.22:0,66,949	0/0:25,0:25:72.23:0,72,1018	0/0:29,0:28:84.27:0,84,1191	0/0:25,0:25:75.21:0,75,1026	0/0:26,1:27:41.06:0,41,1028	0/0:17,0:17:51.15:0,51,698	0/0:6,0:6:18.06:0,18,259
chr10	84681691	.	TAA	T	1331.77	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=4.249;DP=392;FS=4.304;HRun=14;HaplotypeScore=55.4754;InbreedingCoeff=0.8436;MQ=68.78;MQ0=6;MQRankSum=0.983;QD=12.00;ReadPosRankSum=3.987;VQSLOD=2.3187;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,20:27:20.68:349,21,0	1/1:0,6:7:2.82:83,3,0	0/0:42,0:13:12.85:0,13,102	0/0:23,0:13:5.82:0,6,33	0/0:12,0:12:24.80:0,25,284	0/0:8,0:9:17.46:0,17,194	0/0:1,0:5:10.37:0,10,68	0/0:26,0:28:44.96:0,45,497	0/0:2,0:2:5.97:0,6,61	1/1:3,5:8:14.76:130,15,0	1/1:0,11:11:26.99:250,27,0	0/0:5,0:5:11.99:0,12,146	0/0:7,0:7:18:0,18,198	0/0:7,0:8:17.54:0,18,204	0/0:10,0:11:27.07:0,27,348	1/1:1,4:5:8.99:83,9,0	1/1:7,23:28:44.07:547,44,0	0/0:21,1:28:31.75:0,32,605	0/0:25,0:28:49.24:0,49,495	0/0:10,0:10:26.74:0,27,322	0/0:2,0:4:8.51:0,9,78	0/0:6,0:7:17.55:0,18,216	0/0:6,0:7:19.26:0,19,220	0/0:10,0:11:2.50:0,3,300	0/0:17,0:22:24.15:0,24,556	1/1:2,0:13:19.07:61,19,0	0/0:8,0:10:21.06:0,21,278	1/1:5,0:10:8.33:21,8,0
chr10	84684329	.	GGTGTGT	G	1257.23	PASS	AB=0.763;AC=10;AF=0.200;AN=50;BaseQRankSum=5.009;DP=524;FS=0.000;HRun=0;HaplotypeScore=115.4188;InbreedingCoeff=0.6003;MQ=65.47;MQ0=11;MQRankSum=-6.793;QD=12.45;ReadPosRankSum=1.798;VQSLOD=2.6242;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:17.81:0,18,401	1/1:3,2:5:3.01:62,3,0	./.	./.	0/0:13,0:14:18.06:0,18,512	0/0:12,0:14:24.08:0,24,664	0/0:37,0:37:38.65:0,39,691	0/0:23,0:22:39.59:0,40,1041	0/0:11,0:12:21.07:0,21,625	1/1:11,4:15:15.03:272,15,0	1/1:11,6:18:12.04:216,12,0	0/0:18,0:18:42.12:0,42,1149	0/1:18,1:19:22.80:23,0,897	0/0:13,0:13:24.07:0,24,678	0/0:10,0:19:24.08:0,24,686	0/1:5,11:19:58.02:650,0,58	1/1:19,6:25:5.71:181,6,0	0/0:18,0:18:36.12:0,36,1132	0/0:22,0:22:41.13:0,41,985	0/0:7,0:7:1.46:0,1,77	0/0:30,0:28:21.27:0,21,480	./.	0/0:15,0:14:14.93:0,15,427	0/0:24,0:23:57.20:0,57,1783	0/0:10,0:10:21.07:0,21,682	0/0:19,0:25:49.41:0,49,1176	0/0:14,0:15:15.05:0,15,411	0/0:5,0:15:39.13:0,39,1073
chr10	84684364	.	GTA	G	336.24	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.050;DP=497;FS=5.025;HRun=0;HaplotypeScore=77.4801;InbreedingCoeff=0.6597;MQ=68.18;MQ0=9;MQRankSum=1.234;QD=13.45;ReadPosRankSum=-1.447;VQSLOD=2.5463;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:32.40:0,32,317	0/0:3,0:3:4.81:0,5,30	0/0:39,0:13:26.13:0,26,282	0/0:47,0:18:23.41:0,23,364	0/0:12,0:12:32.99:0,33,418	0/0:15,0:15:31.63:0,32,406	1/1:2,23:25:27.09:430,27,0	0/0:17,0:16:44.86:0,45,448	0/0:18,0:18:43.24:0,43,573	0/0:11,0:11:26.13:0,26,161	0/0:10,0:10:12.97:0,13,74	0/0:17,0:16:45.01:0,45,582	0/0:16,0:16:42.91:0,43,533	0/0:14,0:14:32.62:0,33,442	0/0:16,0:16:36.07:0,36,459	0/0:20,0:20:40.55:0,41,264	0/0:22,0:22:53.16:0,53,355	0/0:18,0:16:47.59:0,48,705	0/0:16,0:16:43.07:0,43,367	0/0:5,0:5:4.77:0,5,30	0/0:24,0:23:24.63:0,25,197	0/0:5,0:7:3:0,3,25	0/0:7,0:7:12.50:0,12,186	0/0:33,0:33:92.76:0,93,1380	0/0:12,0:12:36.06:0,36,508	0/0:17,0:17:40.80:0,41,574	0/0:18,0:16:32.97:0,33,303	0/0:12,0:12:27.09:0,27,387
chr10	84684495	.	TG	T	7188.94	PASS	AB=0.941;AC=31;AF=0.554;AN=56;BaseQRankSum=10.480;DP=575;FS=9.207;HRun=8;HaplotypeScore=65.4218;InbreedingCoeff=0.9342;MQ=73.38;MQ0=0;MQRankSum=-1.962;QD=21.78;ReadPosRankSum=-0.648;VQSLOD=4.6910;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,34:42:84.12:811,84,0	1/1:0,5:5:15.02:145,15,0	0/0:14,0:15:33.10:0,33,395	0/1:15,1:16:5.13:5,0,315	0/0:14,0:14:13.73:0,14,397	0/0:18,1:19:25.17:0,25,575	1/1:2,28:30:78.12:753,78,0	1/1:2,20:22:54.06:514,54,0	0/0:21,0:21:57.16:0,57,668	1/1:4,10:14:30.05:290,30,0	1/1:5,9:14:30.04:289,30,0	0/0:22,0:21:57.17:0,57,688	0/0:26,0:26:75.23:0,75,905	0/0:24,0:24:63.18:0,63,749	0/0:20,0:20:51.16:0,51,615	1/1:2,22:24:66.10:637,66,0	1/1:2,28:30:75.12:724,75,0	0/0:21,0:21:54.12:0,54,635	1/1:2,18:21:24.93:487,25,0	1/1:2,6:8:18.02:171,18,0	1/1:4,35:39:99:946,99,0	1/1:4,11:15:30.05:289,30,0	0/0:8,0:8:24.07:0,24,289	0/0:38,0:38:99:0,102,1225	0/0:16,1:17:13.14:0,13,431	1/1:2,14:16:36.05:348,36,0	1/1:3,19:22:48.07:462,48,0	1/1:1,11:12:33.05:319,33,0
chr10	84684503	.	GA	G	1346.83	PASS	AB=0.982;AC=21;AF=0.375;AN=56;BaseQRankSum=16.836;DP=576;FS=7.429;HRun=1;HaplotypeScore=84.7882;InbreedingCoeff=0.1528;MQ=72.07;MQ0=0;MQRankSum=-0.331;QD=3.96;ReadPosRankSum=3.493;VQSLOD=0.3769;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:39:36.93:160,0,37	0/1:7,0:7:12.55:13,0,34	0/0:14,0:14:25.50:0,25,438	0/1:16,0:16:18.45:18,0,402	0/0:15,0:15:30.28:0,30,515	0/0:19,0:19:51.72:0,52,733	0/1:34,0:34:54.09:88,0,54	0/1:28,0:28:34.88:35,0,214	0/0:18,0:18:51.17:0,51,742	0/1:11,1:12:8.42:77,0,8	0/1:11,1:12:2.15:69,0,2	0/0:20,0:19:57.18:0,57,806	0/0:25,0:25:75.25:0,75,1088	0/0:23,0:23:66.19:0,66,909	0/0:20,0:20:54.15:0,54,742	1/1:23,0:23:24.41:136,24,0	1/1:30,1:31:8.83:121,9,0	0/0:21,0:21:63.14:0,63,851	0/1:24,0:24:99:123,0,106	1/1:6,1:7:12.93:76,13,0	0/1:43,2:45:31.36:230,0,31	1/1:11,2:13:24.25:155,24,0	0/0:8,0:8:24.08:0,24,319	0/0:38,0:38:99:0,114,1576	0/0:15,0:15:38.14:0,38,565	0/1:15,0:15:25.69:65,0,26	0/1:22,0:22:21.12:103,0,21	1/1:12,0:12:0.32:60,0,0
chr10	84685610	.	A	AT	2851.02	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-9.434;DP=586;FS=10.244;HRun=10;HaplotypeScore=63.9060;InbreedingCoeff=0.9598;MQ=68.13;MQ0=0;MQRankSum=0.914;QD=23.18;ReadPosRankSum=-2.239;VQSLOD=3.3176;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,834	0/0:8,0:8:20.98:0,21,172	0/0:21,0:20:7.58:0,8,164	0/0:23,0:15:6.37:0,6,112	0/0:41,1:42:78.84:0,79,849	0/0:17,0:18:49.95:0,50,397	0/0:17,1:18:18.98:0,19,359	1/1:9,23:32:75.02:766,75,0	0/0:14,0:14:35.95:0,36,296	0/0:25,0:25:53.88:0,54,441	0/0:11,0:11:29.96:0,30,246	0/0:15,0:15:41.93:0,42,340	0/0:27,0:27:68.91:0,69,566	0/0:13,0:13:29.95:0,30,246	0/0:26,0:26:62.89:0,63,512	0/0:8,0:8:17.95:0,18,145	0/0:38,0:38:99:0,105,857	0/0:14,0:14:38.87:0,39,309	1/1:5,21:26:44.85:672,45,0	1/1:2,17:19:51.13:544,51,0	1/1:1,12:13:21.05:224,21,0	1/1:3,12:15:36.09:384,36,0	0/0:18,0:18:50.93:0,51,417	0/0:22,0:22:56.90:0,57,464	0/0:23,0:23:50.86:0,51,410	0/0:30,0:31:85.91:0,86,691	1/1:3,14:18:42.58:449,43,0	0/0:8,0:8:23.97:0,24,197
chr10	84686046	.	GA	G	1498.16	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.087;DP=506;FS=0.996;HRun=10;HaplotypeScore=58.5300;InbreedingCoeff=0.9318;MQ=64.93;MQ0=12;MQRankSum=1.611;QD=17.02;ReadPosRankSum=2.412;VQSLOD=4.2908;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:36:65.46:0,65,332	1/1:0,9:9:23.99:208,24,0	0/0:24,0:12:6.71:0,7,163	0/0:15,0:10:11.89:0,12,166	0/0:15,0:14:24.05:0,24,257	0/0:9,0:8:15.04:0,15,166	0/0:17,0:16:45.08:0,45,484	0/0:25,0:23:48.10:0,48,515	0/0:10,0:10:27.01:0,27,275	1/1:1,19:20:56.95:486,57,0	1/1:1,19:20:50.57:425,51,0	0/0:22,1:23:40.07:0,40,647	0/0:10,0:11:30.04:0,30,318	0/0:16,0:16:45.11:0,45,488	0/0:11,0:11:27.07:0,27,297	1/1:5,6:10:17.03:135,17,0	1/1:4,24:27:27.89:417,28,0	0/0:22,0:21:31.10:0,31,557	0/0:22,0:22:54.15:0,54,594	0/0:21,0:21:56.86:0,57,582	0/0:11,0:12:29.85:0,30,290	0/0:16,0:16:39:0,39,388	0/0:11,0:11:27.06:0,27,291	0/0:24,0:22:60.16:0,60,664	0/0:17,0:17:33.03:0,33,343	0/0:6,2:28:7.26:0,7,256	0/0:26,0:25:70.43:0,70,766	0/0:3,0:7:8.66:0,9,51
chr10	84687514	.	T	TAA	5661.05	PASS	AB=0.800;AC=30;AF=0.536;AN=56;BaseQRankSum=0.315;DP=574;FS=10.064;HRun=12;HaplotypeScore=87.7504;InbreedingCoeff=0.8337;MQ=67.25;MQ0=2;MQRankSum=-0.741;QD=16.55;ReadPosRankSum=-4.245;VQSLOD=2.1153;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,15:22:33.09:432,33,0	1/1:3,0:11:19.84:69,20,0	0/1:12,0:10:16.78:17,0,36	0/0:6,0:4:4.23:0,4,31	0/0:16,0:17:23.54:0,24,206	0/0:24,0:26:44.81:0,45,463	1/1:7,17:27:56.16:715,56,0	1/1:8,16:26:34.97:735,35,0	0/0:21,0:21:17:0,17,336	1/1:7,0:21:38.46:154,38,0	1/1:5,0:16:25.44:108,25,0	0/0:20,0:21:53.70:0,54,475	0/0:17,0:18:35.88:0,36,380	0/0:13,0:14:35.77:0,36,317	0/0:21,0:24:50.71:0,51,456	0/1:6,0:18:49.45:49,0,70	1/1:6,0:33:47.41:164,47,0	0/0:9,0:12:35.26:0,35,284	1/1:7,7:18:32.03:350,32,0	1/1:6,21:32:71.47:839,71,0	1/1:6,8:15:18.05:239,18,0	1/1:5,12:20:42.66:455,43,0	0/0:21,0:21:36.84:0,37,357	0/0:33,0:34:74.88:0,75,741	0/0:17,0:18:35.82:0,36,380	1/1:5,9:19:26.55:313,27,0	1/1:8,25:35:49.70:642,50,0	1/1:2,13:15:27.09:379,27,0
chr10	84687881	.	CATGTATGTATGTATGTATGT	C	2022.85	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.938;DP=674;FS=0.939;HRun=0;HaplotypeScore=332.9322;InbreedingCoeff=0.8792;MQ=63.41;MQ0=2;MQRankSum=-1.935;QD=29.32;ReadPosRankSum=1.245;VQSLOD=1.8016;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,5:26:6.02:280,6,0	0/0:8,0:8:12.04:0,12,754	0/0:21,0:12:2.97:0,3,68	0/0:24,0:21:14.40:0,14,247	0/0:23,0:23:51.18:0,51,4066	0/0:26,0:26:63.22:0,63,4573	0/0:13,0:25:36.11:0,36,2456	0/0:29,0:29:48.15:0,48,2937	0/0:18,0:19:33.11:0,33,2178	0/0:25,0:25:45.13:0,45,2988	0/0:13,0:13:24.08:0,24,2022	0/0:25,0:25:51.16:0,51,3798	0/0:30,0:30:54.19:0,54,4506	0/0:30,0:30:66.19:0,66,5053	0/0:37,0:37:93.31:0,93,7649	0/0:27,0:26:48.16:0,48,3707	0/0:19,0:19:33.10:0,33,2491	0/0:20,0:21:48.16:0,48,3776	0/0:26,0:26:54.15:0,54,3243	0/0:14,0:14:33.07:0,33,2238	0/0:35,0:35:78.25:0,78,6215	0/0:20,0:20:39.12:0,39,3170	0/0:22,0:22:39.12:0,39,2544	0/0:24,0:25:45.14:0,45,2876	0/0:23,0:23:42.14:0,42,3552	1/1:15,11:26:30.08:1074,30,0	0/0:38,0:38:75.24:0,75,6113	1/1:6,11:16:15.05:800,15,0
chr10	84688200	.	CTCAT	C	1240.92	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.204;DP=395;FS=7.911;HRun=0;HaplotypeScore=73.6237;InbreedingCoeff=0.9294;MQ=66.10;MQ0=0;MQRankSum=-5.684;QD=31.02;ReadPosRankSum=0.039;VQSLOD=2.5781;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,6:12:21.02:314,21,0	0/0:4,0:4:9.03:0,9,237	0/0:16,0:16:45.15:0,45,1135	0/0:9,0:7:15.73:0,16,200	0/0:14,0:14:39.13:0,39,1022	0/0:16,0:16:48.16:0,48,1232	1/1:1,7:7:6.02:92,6,0	0/0:26,0:26:72.21:0,72,1538	0/0:10,0:10:30.10:0,30,732	0/0:17,0:17:51.18:0,51,1324	0/0:11,0:11:24.07:0,24,567	0/0:8,0:8:21.07:0,21,549	0/0:17,0:17:36.12:0,36,912	0/0:14,0:14:36.11:0,36,863	0/0:16,0:16:42.13:0,42,997	0/0:19,0:19:57.18:0,57,1368	0/0:20,0:20:42.14:0,42,1080	0/0:15,0:15:45.15:0,45,1138	0/0:15,0:15:39.13:0,39,972	0/0:18,0:18:54.19:0,54,1388	0/0:13,0:13:36.10:0,36,729	0/0:8,0:8:24.08:0,24,629	0/0:14,0:14:39.13:0,39,997	0/0:23,0:23:54.09:0,54,1320	0/0:19,0:19:51.13:0,51,1151	1/1:5,12:17:45.15:819,45,0	0/0:13,0:13:27.09:0,27,653	1/1:0,3:3:9.03:165,9,0
chr10	84688241	.	A	AG	948.76	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=9.966;DP=469;FS=6.230;HRun=0;HaplotypeScore=88.6239;InbreedingCoeff=0.8727;MQ=54.52;MQ0=13;MQRankSum=-3.599;QD=8.63;ReadPosRankSum=5.393;VQSLOD=3.2971;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:13.91:0,14,109	1/1:3,0:3:7.66:39,8,0	0/0:21,0:2:3.46:0,3,24	0/0:25,0:7:7.57:0,8,64	0/0:22,0:21:40.82:0,41,400	0/0:24,0:24:58.95:0,59,514	1/1:4,2:3:5.24:47,5,0	0/0:12,0:10:19.74:0,20,158	0/0:15,0:15:35.44:0,35,299	1/1:30,0:29:51.74:371,52,0	1/1:18,0:18:18.85:98,19,0	0/0:18,0:18:45.62:0,46,427	0/0:13,0:13:25.76:0,26,223	0/0:15,0:15:32.93:0,33,287	0/0:28,0:28:60.58:0,61,568	1/1:9,1:10:24.91:139,25,0	1/1:18,0:18:4.31:74,4,0	0/0:15,0:14:39.52:0,40,325	0/0:17,0:16:8.76:0,9,192	0/0:16,1:17:32.55:0,33,240	0/0:6,0:6:8.94:0,9,67	0/0:8,0:8:14.98:0,15,126	0/0:11,0:11:25.37:0,25,225	0/0:34,0:32:66.33:0,66,665	0/0:20,0:20:50.24:0,50,430	1/1:18,0:17:42.43:256,42,0	0/0:22,1:22:23.59:0,24,307	1/1:7,0:7:17.74:117,18,0
chr10	84688258	.	A	AGAG	2348.60	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=5.951;DP=455;FS=1.077;HRun=0;HaplotypeScore=104.0948;InbreedingCoeff=0.7629;MQ=50.76;MQ0=22;MQRankSum=-3.343;QD=20.60;ReadPosRankSum=0.841;VQSLOD=3.4819;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:3.34:0,3,199	1/1:2,1:3:6.02:98,6,0	0/0:16,0:2:3:0,3,28	0/0:17,0:3:5.60:0,6,28	0/0:18,0:17:42.07:0,42,499	0/0:13,0:13:9.22:0,9,316	1/1:10,0:5:6.91:36,7,0	0/0:21,0:16:45.05:0,45,482	0/0:15,0:13:36.09:0,36,481	1/1:27,5:30:82.42:1176,82,0	1/1:1,19:20:29.88:403,30,0	0/0:18,0:18:36.09:0,36,479	0/0:10,0:9:18.03:0,18,215	0/0:14,0:13:33.06:0,33,377	0/0:29,0:29:66.15:0,66,862	1/1:8,4:12:27.09:490,27,0	1/1:13,3:15:23.82:317,24,0	0/0:16,0:15:7.93:0,8,369	0/0:14,0:10:21.05:0,21,280	0/0:11,0:11:30.04:0,30,392	0/0:20,0:21:32.99:0,33,450	0/0:9,0:9:21:0,21,240	0/0:11,0:11:30.06:0,30,354	0/0:31,0:30:50.78:0,51,816	0/0:18,0:18:51.10:0,51,622	0/1:19,0:18:6.71:7,0,144	0/0:16,0:16:45.01:0,45,553	0/0:8,0:6:9.20:0,9,42
chr10	84688273	.	GGAA	G	807.62	PASS	AB=0.800;AC=6;AF=0.111;AN=54;BaseQRankSum=8.001;DP=474;FS=2.536;HRun=0;HaplotypeScore=106.2576;InbreedingCoeff=0.5131;MQ=50.43;MQ0=26;MQRankSum=-7.908;QD=13.92;ReadPosRankSum=1.394;VQSLOD=3.6002;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:14:25.44:151,0,25	0/0:6,0:6:8.98:0,9,140	0/0:4,0:1:1.82:0,2,5	./.	0/0:20,0:20:60.18:0,60,1220	0/0:15,0:14:35.95:0,36,722	1/1:13,0:5:4.47:36,4,0	0/0:28,0:21:54.15:0,54,1096	0/0:15,0:12:33.10:0,33,671	0/0:29,0:27:63.06:0,63,1198	0/0:18,0:18:26.11:0,26,486	0/0:19,0:19:57.19:0,57,1216	0/0:10,0:8:21.06:0,21,424	0/0:18,0:17:42.13:0,42,885	0/0:29,0:29:75.26:0,75,1620	0/0:15,0:13:23.69:0,24,429	0/0:18,0:16:28.17:0,28,427	0/0:17,0:17:23.48:0,23,641	0/0:10,0:6:12.01:0,12,181	0/0:13,0:13:36.10:0,36,710	0/0:31,0:29:34.80:0,35,1325	0/0:14,0:14:35.36:0,35,712	0/0:12,0:12:33.10:0,33,650	0/0:30,0:30:75.17:0,75,1559	0/0:18,0:17:48.16:0,48,1014	0/1:6,12:16:23.19:542,0,23	0/0:19,0:19:51.15:0,51,1043	1/1:9,3:10:15.04:202,15,0
chr10	84688279	.	AGAG	A	591.29	PASS	AB=0.889;AC=5;AF=0.093;AN=54;BaseQRankSum=8.242;DP=475;FS=0.000;HRun=0;HaplotypeScore=110.3271;InbreedingCoeff=0.2911;MQ=49.35;MQ0=24;MQRankSum=-8.332;QD=11.37;ReadPosRankSum=0.881;VQSLOD=3.0925;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,7:13:10.81:301,0,11	0/1:6,0:6:10.66:11,0,97	0/0:1,0:1:2.68:0,3,11	./.	0/0:21,0:21:63.20:0,63,1315	0/0:13,0:12:35.99:0,36,713	0/0:14,0:6:5.92:0,6,61	0/0:32,0:25:64.60:0,65,1235	0/0:16,0:13:36.09:0,36,702	0/0:26,0:24:63.06:0,63,1215	0/0:16,0:16:21.07:0,21,427	0/0:19,0:19:57.20:0,57,1225	0/0:11,0:9:24.07:0,24,471	0/0:19,0:18:48.15:0,48,968	0/0:32,0:32:84.24:0,84,1726	0/0:12,0:10:24.07:0,24,423	0/0:17,0:15:16.81:0,17,421	0/0:18,1:19:5.60:0,6,696	0/0:11,0:6:12.04:0,12,215	0/0:13,0:13:36.11:0,36,724	0/0:31,0:29:49.83:0,50,1421	0/0:14,0:14:36.59:0,37,743	0/0:13,0:13:39.12:0,39,773	0/0:33,0:33:78.21:0,78,1594	0/0:20,0:19:56.82:0,57,1022	0/1:19,0:17:30.20:291,0,30	0/0:17,0:17:51.18:0,51,1092	1/1:13,0:11:13.70:105,14,0
chr10	84688321	.	GGAGGAAGAA	G	1787.16	PASS	AB=0.980;AC=15;AF=0.288;AN=52;BaseQRankSum=7.723;DP=582;FS=1.691;HRun=0;HaplotypeScore=183.8451;InbreedingCoeff=0.2786;MQ=47.49;MQ0=52;MQRankSum=-8.046;QD=8.35;ReadPosRankSum=-3.085;VQSLOD=2.3649;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:15:54.91:141,0,55	1/1:3,4:6:5.81:101,6,0	./.	./.	0/0:30,0:28:75.09:0,75,2177	0/0:21,0:20:51.15:0,51,1805	0/0:23,0:13:14.01:0,14,156	0/1:26,0:23:34.96:35,0,357	0/0:20,0:15:42.12:0,42,1172	0/1:20,4:21:99:725,0,289	1/1:15,0:14:15:230,15,0	0/0:25,0:22:57.07:0,57,1700	0/0:15,0:13:36.10:0,36,1113	0/0:21,0:19:47.36:0,47,1490	0/0:29,0:28:63.16:0,63,1843	1/1:6,6:9:12.04:327,12,0	1/1:15,3:13:20.42:273,20,0	0/0:23,0:23:46.23:0,46,1938	0/1:11,0:9:42.81:43,0,510	0/1:27,0:27:14.40:14,0,1348	0/0:54,0:47:99:0,107,2618	0/0:15,0:14:10.99:0,11,567	0/0:17,0:15:39.12:0,39,1343	0/0:37,0:37:83.24:0,83,3167	0/0:24,0:22:63.21:0,63,2083	0/1:32,0:25:50.82:51,0,125	0/1:20,0:20:14.87:15,0,997	0/0:13,0:12:2.04:0,2,53
chr10	84688324	.	GGAAGAA	G	1090.02	PASS	AB=0.983;AC=11;AF=0.212;AN=52;BaseQRankSum=8.763;DP=594;FS=0.574;HRun=0;HaplotypeScore=164.2580;InbreedingCoeff=0.1551;MQ=47.46;MQ0=52;MQRankSum=-8.888;QD=6.34;ReadPosRankSum=-2.015;VQSLOD=2.3649;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:15:22.17:22,0,117	0/1:7,0:6:16.32:42,0,16	./.	./.	0/0:30,0:28:75.14:0,75,2253	0/0:21,0:20:52.72:0,53,1595	0/1:24,0:14:22.84:23,0,105	0/0:25,0:22:12.93:0,13,531	0/0:22,0:17:48.15:0,48,1351	0/1:23,2:22:99:456,0,207	1/1:14,1:14:14.95:203,15,0	0/0:25,0:22:57.20:0,57,1820	0/0:15,0:13:36.12:0,36,1146	0/0:22,0:20:51.16:0,51,1564	0/0:29,0:28:66.21:0,66,2009	1/1:11,0:8:12:166,12,0	0/1:20,1:15:22.48:172,0,22	0/0:25,0:24:41.72:0,42,1708	0/0:12,0:10:1.38:0,1,417	0/0:27,0:27:63.79:0,64,1336	0/0:57,0:50:99:0,135,2910	0/0:14,0:14:35.51:0,36,773	0/0:18,0:16:42.14:0,42,1380	0/0:36,0:36:99:0,102,3223	0/0:24,0:22:63.22:0,63,2031	0/1:33,0:26:29.38:108,0,29	0/0:20,0:20:52.09:0,52,1173	0/1:14,0:13:45.01:50,0,45
chr10	84688333	.	GGAGGAA	G	1181.42	PASS	AB=0.973;AC=10;AF=0.192;AN=52;BaseQRankSum=9.877;DP=569;FS=5.972;HRun=0;HaplotypeScore=161.1406;InbreedingCoeff=0.1779;MQ=48.04;MQ0=46;MQRankSum=-7.878;QD=9.53;ReadPosRankSum=-3.093;VQSLOD=1.7081;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:15:26.05:26,0,68	0/1:6,1:6:12.77:45,0,13	./.	./.	0/0:30,0:28:69.22:0,69,2040	0/0:17,0:16:30.33:0,30,1526	0/1:17,0:8:31.62:131,0,32	0/0:23,0:21:51.09:0,51,1039	0/0:21,0:17:45.13:0,45,1359	0/1:23,1:21:99:506,0,238	1/1:10,2:11:12.04:227,12,0	0/0:24,0:21:48.13:0,48,1440	0/0:16,0:14:33.11:0,33,1014	0/0:24,0:23:57.16:0,57,1708	0/0:28,0:27:57.18:0,57,1698	1/1:11,0:8:2.18:174,2,0	0/1:19,0:14:30.97:194,0,31	0/0:26,0:25:53.46:0,53,1834	0/0:11,0:9:24.07:0,24,680	0/0:27,0:27:66.95:0,67,1994	0/0:59,0:53:99:0,150,4216	0/0:13,0:13:33.07:0,33,896	0/0:16,0:15:39.11:0,39,1065	0/0:36,0:36:88.31:0,88,2998	0/0:23,0:21:60.17:0,60,1664	0/0:33,0:26:8.37:0,8,327	0/0:18,0:18:48.16:0,48,1463	0/1:12,0:11:20.48:20,0,41
chr10	84688336	.	GGAA	G	465.38	PASS	AB=0.962;AC=10;AF=0.192;AN=52;BaseQRankSum=9.503;DP=565;FS=7.569;HRun=0;HaplotypeScore=133.4069;InbreedingCoeff=0.1827;MQ=47.81;MQ0=47;MQRankSum=-8.394;QD=3.66;ReadPosRankSum=-1.988;VQSLOD=1.5999;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:18:52.23:52,0,69	1/1:7,0:6:2.94:18,3,0	./.	./.	0/0:29,0:27:69.13:0,69,1306	0/0:17,0:16:30.17:0,30,990	0/1:12,5:8:39.05:154,0,39	0/0:24,0:22:50.89:0,51,604	0/0:21,0:17:45.13:0,45,876	0/1:25,0:22:99:181,0,279	1/1:11,0:10:11.91:91,12,0	0/0:23,0:20:54.13:0,54,1015	0/0:16,0:14:33.10:0,33,655	0/0:24,0:23:60.10:0,60,1147	0/0:25,0:24:57.17:0,57,1083	0/1:11,0:8:40.30:42,0,40	0/1:19,0:15:50.10:51,0,50	0/0:26,0:25:39.61:0,40,1159	0/0:10,0:9:27.08:0,27,489	0/0:26,0:26:67.24:0,67,1310	0/0:62,0:55:99:0,156,2695	0/0:12,0:12:33.07:0,33,591	0/0:15,0:14:39.09:0,39,700	0/0:35,0:35:85.76:0,86,1954	0/0:24,0:22:63.10:0,63,1112	0/0:31,0:23:32.80:0,33,302	0/0:18,0:18:51.09:0,51,913	0/1:12,0:11:19.31:19,0,48
chr10	84688351	.	A	AGAG	74.48	PASS	AB=0.930;AC=7;AF=0.130;AN=54;BaseQRankSum=7.324;DP=548;FS=0.000;HRun=0;HaplotypeScore=114.0935;InbreedingCoeff=0.1396;MQ=50.57;MQ0=40;MQRankSum=-6.387;QD=0.78;ReadPosRankSum=0.186;VQSLOD=1.5354;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:15:11.19:0,11,84	1/1:5,0:4:3.01:31,3,0	./.	0/0:8,0:7:14.38:0,14,147	0/0:24,0:22:54.17:0,54,888	0/0:18,0:17:48.10:0,48,780	0/1:20,0:12:13.88:15,0,14	0/0:21,0:19:45.10:0,45,664	0/0:20,0:17:45.15:0,45,730	0/0:17,0:16:10.23:0,10,252	0/0:8,0:7:5.64:0,6,31	0/0:22,0:20:54.01:0,54,822	0/0:12,0:10:30.05:0,30,456	0/0:22,0:21:54.14:0,54,806	0/0:27,0:27:51.13:0,51,799	0/1:13,0:11:29.95:30,0,38	0/1:19,0:16:3.47:3,0,93	0/0:31,0:30:37.03:0,37,1102	0/0:19,0:14:39.13:0,39,636	0/0:23,0:23:60.20:0,60,998	0/0:60,0:55:99:0,137,2182	0/0:11,0:11:27.09:0,27,448	0/0:14,0:12:33.10:0,33,528	0/0:34,0:34:93.04:0,93,1405	0/0:17,0:16:45.14:0,45,721	0/1:26,1:20:99:102,0,161	0/0:19,0:19:48.15:0,48,762	0/1:6,5:10:7.22:12,0,7
chr10	84688369	.	A	AGAG	1388.69	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=5.995;DP=539;FS=16.149;HRun=0;HaplotypeScore=113.5776;InbreedingCoeff=0.7080;MQ=59.92;MQ0=24;MQRankSum=-4.031;QD=9.71;ReadPosRankSum=-1.329;VQSLOD=1.7966;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:15:12.43:136,12,0	1/1:6,0:5:9:98,9,0	0/0:12,0:6:17.42:0,17,204	0/0:19,0:17:35.05:0,35,355	0/0:21,0:19:36.12:0,36,520	0/0:20,0:20:39.08:0,39,554	0/1:19,0:17:21.43:27,0,21	0/0:19,0:21:33.08:0,33,413	0/0:17,0:14:39.13:0,39,561	1/1:8,12:20:39.12:713,39,0	1/1:5,1:6:18.06:334,18,0	0/0:18,0:16:33.09:0,33,456	0/0:12,0:11:27.08:0,27,365	0/0:21,0:21:42.13:0,42,585	0/0:19,0:19:42.12:0,42,572	1/1:4,9:12:3.48:62,3,0	1/1:6,15:21:9.03:184,9,0	0/0:30,0:30:61.16:0,61,864	0/0:20,0:16:21.02:0,21,265	0/0:21,0:21:33.10:0,33,457	0/0:56,0:51:99:0,112,1562	0/0:8,0:8:21.07:0,21,302	0/0:13,0:12:27.07:0,27,365	0/0:32,0:32:78.19:0,78,1032	0/0:20,0:19:39.12:0,39,546	0/1:25,0:19:0.20:0,0,117	0/0:16,0:16:30.10:0,30,426	0/1:12,0:11:13.01:13,0,13
chr10	84688388	.	AAGGTCTATGTACTGC	A	1893.16	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.636;DP=477;FS=2.087;HRun=0;HaplotypeScore=205.3549;InbreedingCoeff=0.9396;MQ=81.47;MQ0=1;MQRankSum=-5.973;QD=70.12;ReadPosRankSum=1.840;VQSLOD=3.5517;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,6:13:21.07:873,21,0	0/0:7,0:7:18.06:0,18,1308	0/0:19,0:14:36.09:0,36,1618	0/0:30,0:28:47.70:0,48,3384	0/0:13,0:13:27.09:0,27,1748	0/0:17,0:17:39.13:0,39,2669	0/0:20,0:19:42.14:0,42,2723	0/0:24,0:24:54.17:0,54,2886	0/0:15,0:14:33.11:0,33,2405	0/0:18,0:18:51.17:0,51,3172	0/0:7,0:7:9.03:0,9,656	0/0:21,0:21:60.21:0,60,4009	0/0:9,0:9:18.06:0,18,1163	0/0:20,0:20:54.19:0,54,3758	0/0:18,0:18:51.16:0,51,3214	0/0:14,0:14:18.06:0,18,1311	0/0:19,0:19:12.04:0,12,693	0/0:28,0:28:78.25:0,78,5341	0/0:17,0:17:42.14:0,42,2218	0/0:12,0:12:30.10:0,30,1780	0/0:45,0:44:99:0,105,7082	0/0:9,0:9:24.08:0,24,1750	0/0:8,0:8:21.07:0,21,1530	0/0:32,0:32:84.29:0,84,5415	0/0:14,0:14:33.11:0,33,2407	1/1:4,4:8:12.04:513,12,0	0/0:14,0:13:30.10:0,30,2054	1/1:0,6:6:15.05:642,15,0
chr10	84688391	.	GTCTATGT	G	687.73	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=6.898;DP=478;FS=4.966;HRun=0;HaplotypeScore=137.1545;InbreedingCoeff=0.7481;MQ=83.89;MQ0=1;MQRankSum=-5.840;QD=25.47;ReadPosRankSum=2.291;VQSLOD=3.1852;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,4:13:21.07:400,21,0	0/0:6,0:6:18.06:0,18,755	0/0:19,0:15:39.13:0,39,1515	0/0:30,0:29:47.63:0,48,2741	0/0:13,0:13:39.01:0,39,1338	0/0:17,0:17:48.14:0,48,1815	0/0:21,0:20:48:0,48,1761	0/0:23,0:23:63.21:0,63,2430	0/0:13,0:13:39.13:0,39,1579	0/0:17,0:17:51.18:0,51,2078	0/0:8,0:8:11.56:0,12,495	0/0:20,0:20:60.21:0,60,2516	0/0:10,0:10:27.09:0,27,1043	0/0:19,0:19:54.19:0,54,2221	0/0:19,0:19:54.19:0,54,2222	0/0:16,0:16:21.07:0,21,869	0/0:19,0:19:15.05:0,15,585	0/0:29,0:29:87.30:0,87,3518	0/0:18,0:18:54.19:0,54,2151	0/0:13,0:13:39.13:0,39,1535	0/0:45,0:44:99:0,132,5098	0/0:9,0:9:24.08:0,24,1007	0/0:9,0:9:27.09:0,27,1082	0/0:32,0:32:96.30:0,96,3774	0/0:13,0:13:39.07:0,39,1484	0/1:8,0:8:99:173,0,263	0/0:13,0:12:36.09:0,36,1295	1/1:6,0:6:15.05:241,15,0
chr10	84688400	.	CTG	C	163.59	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.163;DP=497;FS=3.251;HRun=0;HaplotypeScore=89.2162;InbreedingCoeff=0.9733;MQ=84.14;MQ0=0;MQRankSum=-5.286;QD=7.79;ReadPosRankSum=1.747;VQSLOD=2.8618;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,4:11:20.64:144,21,0	0/0:7,0:7:21.07:0,21,426	0/0:21,0:19:54.15:0,54,1013	0/0:31,0:30:37.88:0,38,1375	0/0:9,0:9:27.09:0,27,548	0/0:14,0:14:39.13:0,39,792	0/0:21,0:20:48.16:0,48,974	0/0:27,0:27:75.24:0,75,1428	0/0:13,0:13:39.13:0,39,776	0/0:19,0:19:57.20:0,57,1111	0/0:8,0:8:18.06:0,18,365	0/0:24,0:24:72.25:0,72,1462	0/0:11,0:11:30.10:0,30,581	0/0:19,0:19:54.19:0,54,1097	0/0:25,0:25:72.20:0,72,1353	0/0:20,0:20:30.10:0,30,609	0/0:23,0:23:27.09:0,27,513	0/0:30,0:30:90.29:0,90,1769	0/0:22,0:22:66.20:0,66,1237	0/0:12,0:12:36.12:0,36,732	0/0:43,0:42:99:0,123,2486	0/0:10,0:10:30.10:0,30,610	0/0:8,0:8:24.08:0,24,487	0/0:31,0:31:93.32:0,93,1889	0/0:15,0:15:45.15:0,45,900	1/1:4,0:4:11.67:71,12,0	0/0:12,0:11:33.11:0,33,655	1/1:6,0:6:14.49:84,14,0
chr10	84689833	.	GAAGAAAAA	G	1122.11	PASS	AB=0.826;AC=5;AF=0.089;AN=56;BaseQRankSum=5.923;DP=641;FS=0.000;HRun=0;HaplotypeScore=177.5099;InbreedingCoeff=0.7721;MQ=67.07;MQ0=13;MQRankSum=-5.385;QD=17.53;ReadPosRankSum=2.053;VQSLOD=2.2423;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:22:29.98:408,30,0	0/0:7,0:7:21.04:0,21,474	0/0:59,0:25:22.84:0,23,430	0/0:33,0:14:16.62:0,17,225	0/0:21,0:21:57.05:0,57,1177	0/0:16,0:16:45.01:0,45,954	1/1:1,20:22:29.71:761,30,0	0/0:27,0:27:78.15:0,78,1466	0/0:14,0:14:39.09:0,39,996	0/0:35,0:35:99:0,102,2421	0/0:18,0:18:51.16:0,51,1602	0/0:18,0:18:54.11:0,54,1381	0/0:15,0:16:48.12:0,48,1210	0/0:16,0:16:45.04:0,45,801	0/0:25,0:25:66.12:0,66,1821	0/0:23,0:23:63.13:0,63,1718	0/0:26,0:26:69.65:0,70,1994	0/0:27,0:27:78.05:0,78,1877	0/0:20,0:18:57.08:0,57,934	0/0:29,0:29:84.17:0,84,1884	0/0:13,0:13:35.44:0,35,793	0/0:20,0:20:54.09:0,54,1021	0/0:25,0:25:66.02:0,66,1418	0/0:29,0:29:55.81:0,56,1752	0/0:27,0:27:80.36:0,80,1735	0/1:15,0:19:83.03:83,0,243	0/0:26,0:25:66.12:0,66,1510	0/0:6,0:7:20.70:0,21,230
chr10	84689857	.	G	GA	1741.34	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=7.284;DP=732;FS=1.130;HRun=6;HaplotypeScore=110.6673;InbreedingCoeff=0.8442;MQ=69.03;MQ0=10;MQRankSum=-3.504;QD=13.93;ReadPosRankSum=0.465;VQSLOD=2.8351;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,30:34:70.76:820,71,0	0/0:9,0:9:18.04:0,18,183	0/1:49,0:16:10.86:11,0,247	0/0:40,0:18:29.07:0,29,272	0/0:23,0:23:48.05:0,48,477	0/0:18,0:18:44.31:0,44,434	0/0:21,0:21:49.82:0,50,322	0/0:26,0:26:62.77:0,63,596	0/0:22,0:22:48:0,48,475	0/0:43,0:43:99:0,117,1158	0/0:23,0:23:60.09:0,60,600	0/0:21,0:21:35.81:0,36,328	0/0:21,0:21:47.86:0,48,439	0/0:13,0:13:27:0,27,259	0/0:29,0:29:65.59:0,66,606	0/0:28,0:28:75.15:0,75,754	0/0:26,0:26:66.11:0,66,660	0/0:33,0:33:72.83:0,73,718	0/0:23,0:21:50.64:0,51,475	0/0:29,0:29:61.56:0,62,594	0/0:23,0:23:50.87:0,51,492	0/0:20,0:20:42.68:0,43,394	0/0:24,0:24:54:0,54,518	0/0:33,0:33:56.71:0,57,546	0/0:30,0:30:63.05:0,63,639	1/1:9,22:31:38.58:770,39,0	0/0:29,0:28:68.87:0,69,661	1/1:2,8:10:24.07:288,24,0
chr10	84690868	.	CA	C	786.39	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.082;DP=758;FS=1.744;HRun=1;HaplotypeScore=75.8552;InbreedingCoeff=0.9987;MQ=90.22;MQ0=0;MQRankSum=-1.646;QD=35.74;ReadPosRankSum=-1.192;VQSLOD=3.3563;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,2091	0/0:9,0:9:27.09:0,27,425	0/0:26,0:26:75.23:0,75,1169	0/0:33,1:34:80.67:0,81,1344	0/0:17,0:17:51.14:0,51,768	0/0:29,0:29:87.28:0,87,1368	1/1:0,22:22:63.21:881,63,0	0/0:39,0:39:99:0,114,1799	0/0:26,0:26:78.27:0,78,1239	0/0:28,0:29:84.28:0,84,1310	0/0:25,0:25:75.26:0,75,1199	0/0:33,0:33:99:0,99,1568	0/0:30,0:30:90.31:0,90,1438	0/0:29,0:29:87.28:0,87,1355	0/0:24,0:24:72.25:0,72,1147	0/0:27,0:27:81.26:0,81,1261	0/0:29,0:29:84.27:0,84,1319	0/0:20,0:20:57.19:0,57,911	0/0:21,0:21:63.20:0,63,971	0/0:32,0:32:96.29:0,96,1454	0/0:26,0:26:78.25:0,78,1217	0/0:24,0:24:72.25:0,72,1151	0/0:30,0:30:90.31:0,90,1431	0/0:28,0:28:84.29:0,84,1340	0/0:34,0:34:99:0,102,1606	0/0:21,0:21:63.21:0,63,1004	0/0:38,0:38:99:0,114,1783	0/0:11,0:11:33.11:0,33,527
chr10	84691285	.	GAGA	G	4448.81	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.890;DP=606;FS=0.415;HRun=0;HaplotypeScore=90.9911;InbreedingCoeff=0.9854;MQ=93.78;MQ0=0;MQRankSum=-3.301;QD=47.33;ReadPosRankSum=2.937;VQSLOD=7.0143;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,2559	1/1:1,9:10:30.10:511,30,0	0/0:29,0:29:87.27:0,87,1781	0/0:26,0:26:66.23:0,66,1507	0/0:29,0:29:84.25:0,84,1802	0/0:24,0:24:72.25:0,72,1659	0/0:20,0:20:60.17:0,60,1226	0/0:19,0:19:54.18:0,54,1203	0/0:12,0:12:36.12:0,36,830	1/1:1,18:19:54.18:921,54,0	1/1:1,16:17:42.14:716,42,0	0/0:23,0:23:43.26:0,43,1429	0/0:18,0:18:54.18:0,54,1186	0/0:32,0:32:84.24:0,84,1778	0/0:20,0:20:60.21:0,60,1384	1/1:1,22:23:63.22:1074,63,0	1/1:1,24:25:72.25:1227,72,0	0/0:18,0:18:54.19:0,54,1244	0/0:13,0:13:36.08:0,36,755	0/0:22,0:22:63.20:0,63,1398	0/0:24,0:24:72.23:0,72,1615	0/0:14,0:14:39.11:0,39,853	0/0:30,0:30:75.71:0,76,1638	0/0:22,0:22:63.20:0,63,1362	0/0:22,0:21:63.22:0,63,1453	0/0:19,1:20:9.03:0,9,1263	0/0:31,0:30:93.31:0,93,2075	0/0:7,0:7:21.04:0,21,437
chr10	84694636	.	G	GCC	1010.97	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=0.991;DP=615;FS=7.697;HRun=8;HaplotypeScore=78.5237;InbreedingCoeff=0.9443;MQ=78.36;MQ0=0;MQRankSum=-3.445;QD=14.65;ReadPosRankSum=0.425;VQSLOD=0.8431;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,26:37:62.69:952,63,0	0/0:4,0:4:6.01:0,6,67	0/0:20,0:20:25.65:0,26,367	0/0:14,0:13:29.44:0,29,303	0/0:20,0:20:57.15:0,57,635	0/0:22,0:22:60.15:0,60,668	0/0:26,0:26:66.15:0,66,736	0/0:22,0:22:51.10:0,51,562	0/0:24,0:24:66.13:0,66,715	0/0:23,0:23:57.13:0,57,629	0/0:16,0:16:42.10:0,42,468	0/0:16,0:16:39.06:0,39,417	0/0:26,0:26:69.16:0,69,769	0/0:27,0:27:75.20:0,75,836	0/0:28,0:28:78.15:0,78,848	0/0:22,0:22:63.17:0,63,702	0/0:29,0:29:84.21:0,84,925	0/0:21,0:21:57.14:0,57,635	0/0:16,0:16:33.07:0,33,368	0/0:24,0:24:66.14:0,66,719	0/0:38,0:38:99:0,105,1159	0/0:19,0:19:45.10:0,45,501	0/0:18,0:18:51.14:0,51,568	0/0:21,0:21:54.13:0,54,602	0/0:15,0:15:36.08:0,36,401	1/1:3,0:26:21.65:161,22,0	0/0:35,0:35:96.25:0,96,1069	1/1:2,0:6:9.98:34,10,0
chr10	84696145	.	T	TC	622.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.129;DP=630;FS=14.930;HRun=6;HaplotypeScore=62.9851;InbreedingCoeff=0.9570;MQ=75.98;MQ0=0;MQRankSum=-1.790;QD=22.22;ReadPosRankSum=-0.058;VQSLOD=1.9710;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,99,996	0/0:4,0:4:12.03:0,12,122	0/0:20,0:20:34.44:0,34,372	0/0:18,1:15:18.30:0,18,247	0/0:23,0:22:57.13:0,57,581	0/0:22,0:22:60.11:0,60,605	1/1:2,26:28:57.18:717,57,0	0/0:23,0:23:60.11:0,60,597	0/0:26,0:26:75.15:0,75,753	0/0:16,0:16:39.07:0,39,393	0/0:14,0:14:42.09:0,42,424	0/0:28,0:28:75.14:0,75,753	0/0:19,0:19:51.06:0,51,499	0/0:19,0:19:48.05:0,48,468	0/0:24,0:24:63.14:0,63,643	0/0:23,0:23:63.14:0,63,643	0/0:21,0:21:60.12:0,60,605	0/0:28,0:28:72.16:0,72,734	0/0:13,0:13:24:0,24,230	0/0:20,0:20:54.08:0,54,532	0/0:53,0:53:99:0,150,1498	0/0:23,0:23:63.11:0,63,630	0/0:14,0:14:33.05:0,33,326	0/0:27,0:27:75.15:0,75,758	0/0:17,0:17:45.04:0,45,446	0/0:29,0:29:80.08:0,80,774	0/0:29,0:28:87.20:0,87,887	0/0:7,0:7:21.05:0,21,214
chr10	84696776	.	G	GA	1063.95	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=-3.573;DP=634;FS=0.612;HRun=3;HaplotypeScore=69.0910;InbreedingCoeff=0.4494;MQ=81.53;MQ0=0;MQRankSum=-3.919;QD=12.52;ReadPosRankSum=-0.602;VQSLOD=1.7933;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:78.26:1056,78,0	0/0:4,0:4:12.02:0,12,132	0/0:34,0:34:46.36:0,46,640	0/0:14,0:14:22.30:0,22,234	0/0:26,0:26:66.20:0,66,786	0/0:19,0:19:51.14:0,51,592	0/1:27,0:27:30.96:60,0,31	0/0:23,0:23:57.13:0,57,635	0/0:22,0:22:66.18:0,66,765	0/0:27,0:27:72.19:0,72,825	0/0:10,0:10:30.08:0,30,346	0/0:24,0:24:66.15:0,66,744	0/0:25,0:25:72.18:0,72,832	0/0:25,0:25:63.16:0,63,719	0/0:19,0:19:57.15:0,57,652	0/0:23,0:23:69.19:0,69,801	0/0:25,0:25:72.20:0,72,847	0/0:22,0:22:60.11:0,60,666	0/0:20,0:20:60.12:0,60,655	0/0:26,0:26:69.17:0,69,797	0/0:33,0:33:93.19:0,93,1037	0/0:15,0:15:44.95:0,45,496	0/0:10,0:10:27.08:0,27,322	0/0:37,0:37:99:0,105,1212	0/0:18,0:18:54.13:0,54,612	0/1:26,0:26:60.40:63,0,60	0/0:29,0:29:80.90:0,81,864	0/0:18,0:18:17.07:0,17,50
chr10	84696828	.	CTG	C	1323.42	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.147;DP=654;FS=0.000;HRun=0;HaplotypeScore=87.3379;InbreedingCoeff=0.9975;MQ=88.77;MQ0=0;MQRankSum=-2.249;QD=45.64;ReadPosRankSum=-0.238;VQSLOD=4.8274;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:96.31:0,96,1898	0/0:8,0:8:24.08:0,24,487	0/0:20,0:20:58.27:0,58,944	0/0:32,0:32:71.82:0,72,1190	0/0:18,0:18:48.15:0,48,938	0/0:22,0:22:63.22:0,63,1279	1/1:0,29:29:87.30:1418,87,0	0/0:25,0:25:75.24:0,75,1426	0/0:17,0:17:51.17:0,51,989	0/0:26,0:26:78.26:0,78,1552	0/0:19,0:19:48.16:0,48,962	0/0:27,0:27:81.26:0,81,1607	0/0:31,0:31:93.32:0,93,1877	0/0:21,0:21:63.20:0,63,1219	0/0:14,0:14:42.14:0,42,842	0/0:27,0:27:81.28:0,81,1632	0/0:31,0:31:93.32:0,93,1874	0/0:29,0:29:81.23:0,81,1585	0/0:18,0:18:54.19:0,54,1085	0/0:22,0:22:63.16:0,63,1190	0/0:38,0:38:99:0,114,2255	0/0:18,0:18:54.07:0,54,935	0/0:12,0:12:33.11:0,33,669	0/0:33,0:33:99:0,99,1935	0/0:16,0:16:48.16:0,48,975	0/0:23,0:23:69.23:0,69,1333	0/0:29,0:29:87.28:0,87,1706	0/0:12,0:12:36.12:0,36,731
chr10	84697096	.	TG	T	953.62	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.593;DP=615;FS=4.960;HRun=1;HaplotypeScore=78.4078;InbreedingCoeff=0.9895;MQ=84.58;MQ0=0;MQRankSum=-2.638;QD=35.32;ReadPosRankSum=0.716;VQSLOD=3.7711;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:99:0,135,2104	0/0:6,0:6:18.04:0,18,263	0/0:21,0:21:58.76:0,59,827	0/0:18,0:18:31.98:0,32,655	0/0:12,0:12:36.11:0,36,553	0/0:22,0:22:60.20:0,60,959	1/1:0,27:27:75.25:1049,75,0	0/0:12,0:12:33.11:0,33,523	0/0:10,0:10:30.07:0,30,432	0/0:18,0:18:54.18:0,54,863	0/0:10,0:10:30.10:0,30,478	0/0:27,0:27:81.28:0,81,1279	0/0:16,0:16:48.16:0,48,765	0/0:27,0:27:78.27:0,78,1235	0/0:20,0:20:60.20:0,60,954	0/0:20,0:20:60.15:0,60,882	0/0:44,0:44:99:0,132,2061	0/0:45,0:45:99:0,132,2079	0/0:16,0:16:45.14:0,45,692	0/0:14,0:14:42.14:0,42,664	0/0:55,0:55:99:0,163,2529	0/0:17,0:17:48.13:0,48,718	0/0:12,0:12:33.11:0,33,528	0/0:34,0:34:99:0,99,1521	0/0:15,0:15:42.13:0,42,642	0/0:27,0:27:78.26:0,78,1224	0/0:14,0:14:42.14:0,42,668	0/0:10,0:10:30.10:0,30,480
chr10	84697242	.	CA	C	720.78	PASS	AB=0.857;AC=9;AF=0.161;AN=56;BaseQRankSum=7.750;DP=509;FS=5.002;HRun=12;HaplotypeScore=63.0338;InbreedingCoeff=0.6756;MQ=60.29;MQ0=5;MQRankSum=1.148;QD=6.74;ReadPosRankSum=3.032;VQSLOD=2.2270;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,29:38:62.37:606,62,0	0/0:8,0:9:24.01:0,24,233	0/0:18,2:9:3.82:0,4,21	0/0:24,0:5:2.71:0,3,35	0/0:14,1:16:15.66:0,16,319	0/0:18,0:18:36.07:0,36,364	1/1:4,0:24:36.67:106,37,0	0/0:17,2:19:15.44:0,15,303	0/0:8,1:9:0.78:0,1,179	0/0:13,0:14:32.57:0,33,298	0/0:21,1:22:27.69:0,28,425	0/0:22,0:22:31.53:0,32,459	0/0:14,0:14:33.06:0,33,327	0/0:12,0:13:23.88:0,24,223	0/0:13,1:14:33.06:0,33,330	0/0:15,1:16:12.63:0,13,280	0/0:32,2:34:43.66:0,44,787	0/0:17,1:18:35.99:0,36,338	0/0:15,0:15:24.35:0,24,290	0/1:14,3:16:33.51:34,0,227	0/0:17,0:16:48.06:0,48,468	0/0:13,1:14:9.65:0,10,255	0/0:7,0:7:21.04:0,21,213	0/0:30,0:30:75.13:0,75,748	0/0:16,2:19:1.45:0,1,364	1/1:6,1:21:30.34:101,30,0	0/0:18,0:17:28.08:0,28,459	1/1:1,0:6:11.74:33,12,0
chr10	84697858	.	G	GGA	288.30	PASS	AC=14;AF=0.350;AN=40;BaseQRankSum=-0.061;DP=169;FS=0.000;HRun=0;HaplotypeScore=38.8613;InbreedingCoeff=0.5590;MQ=82.39;MQ0=7;MQRankSum=-1.471;QD=8.48;ReadPosRankSum=-0.305;VQSLOD=2.5974;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:2.96:19,3,0	./.	0/0:30,0:6:2.84:0,3,14	0/0:47,0:21:4.14:0,4,157	0/0:2,0:2:6.02:0,6,73	0/0:1,0:1:3:0,3,25	1/1:3,0:3:3.01:38,3,0	0/0:6,0:6:7.08:0,7,37	0/0:1,0:1:3.01:0,3,36	1/1:4,3:7:9.01:92,9,0	1/1:3,0:3:3:25,3,0	./.	0/0:1,0:1:2.99:0,3,24	0/0:5,0:5:9:0,9,84	0/0:5,0:5:9.02:0,9,99	1/1:0,3:3:9.03:127,9,0	1/1:0,7:8:6.02:95,6,0	0/0:7,0:7:15.02:0,15,162	./.	./.	./.	./.	0/0:4,0:4:8.99:0,9,77	0/0:7,0:7:18:0,18,172	0/0:6,0:6:11.99:0,12,112	1/1:5,0:5:4.36:29,4,0	./.	./.
chr10	84697859	.	GAGA	G	77.18	PASS	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.887;DP=168;FS=4.082;HRun=0;HaplotypeScore=36.7797;InbreedingCoeff=0.2374;MQ=80.66;MQ0=7;MQRankSum=-0.942;QD=12.86;ReadPosRankSum=-1.570;VQSLOD=2.4622;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:2.98:0,3,22	0/0:1,0:2:2.94:0,3,18	0/0:27,0:5:3.01:0,3,36	0/0:50,0:21:16.92:0,17,497	0/0:2,0:2:6.02:0,6,133	0/0:2,0:2:6.02:0,6,91	0/0:4,0:4:2.84:0,3,49	1/1:2,4:6:12.02:160,12,0	0/0:1,0:1:3.01:0,3,65	0/0:6,0:6:9.03:0,9,154	0/0:4,0:4:12.03:0,12,173	./.	0/0:1,0:1:3.01:0,3,66	0/0:5,0:5:9.50:0,10,195	0/0:5,0:5:8.31:0,8,195	0/0:4,0:3:9.03:0,9,132	0/0:8,0:8:9.03:0,9,129	0/0:8,0:8:18.02:0,18,339	./.	./.	./.	./.	0/0:4,0:4:12.02:0,12,171	0/0:7,0:7:18.06:0,18,332	0/0:6,0:6:12.03:0,12,234	0/0:5,0:5:0.73:0,1,89	./.	./.
chr10	84698249	.	G	GCGCA	1373.85	PASS	AB=0.766;AC=14;AF=0.250;AN=56;BaseQRankSum=3.349;DP=488;FS=4.926;HRun=0;HaplotypeScore=100.2954;InbreedingCoeff=0.2808;MQ=57.50;MQ0=11;MQRankSum=-0.141;QD=6.61;ReadPosRankSum=-1.750;VQSLOD=1.6621;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:34:28.02:28,0,169	1/1:4,0:8:11.77:75,12,0	0/0:7,0:1:3.01:0,3,32	0/0:7,0:3:2.84:0,3,14	0/0:8,0:7:10.19:0,10,70	0/0:9,0:14:8.65:0,9,117	1/1:41,0:41:58.95:440,59,0	0/0:18,0:16:19.10:0,19,268	0/0:20,0:20:26.88:0,27,506	1/1:12,0:11:1.97:141,2,0	1/1:11,0:18:9.17:159,9,0	0/0:34,0:35:66.62:0,67,690	0/0:15,0:20:41.99:0,42,524	0/0:17,0:17:41.81:0,42,427	0/0:19,0:22:47.94:0,48,508	0/1:1,7:9:13.74:75,0,14	0/1:9,22:34:72.72:494,0,73	0/0:10,0:11:29.96:0,30,362	0/0:8,0:11:21.25:0,21,151	0/0:4,0:11:18.01:0,18,206	0/0:14,0:19:23.97:0,24,225	0/0:11,0:17:0.46:0,0,155	0/1:7,0:7:9.02:9,0,36	0/1:13,0:26:31.34:31,0,241	0/0:14,0:14:32.62:0,33,276	0/1:16,0:15:86.14:86,0,131	0/0:12,0:19:35.08:0,35,309	0/0:4,0:4:11.97:0,12,94
chr10	84698287	.	A	ACACACACACACACT	2457.31	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=-0.881;DP=627;FS=9.739;HRun=0;HaplotypeScore=213.8340;InbreedingCoeff=0.7259;MQ=61.68;MQ0=16;MQRankSum=-2.560;QD=16.72;ReadPosRankSum=-3.544;VQSLOD=0.5466;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:42:42.16:498,42,0	0/1:9,0:9:20.98:21,0,99	0/0:47,0:19:30.27:0,30,359	0/0:46,0:17:46.42:0,46,406	0/0:16,0:16:20.98:0,21,264	0/0:22,0:21:41.99:0,42,507	1/1:38,0:38:52.06:687,52,0	0/1:22,0:22:13.79:14,0,458	0/0:21,0:21:48.57:0,49,1277	0/0:16,0:13:24.52:0,25,327	0/0:18,0:18:14.99:0,15,191	0/0:37,0:37:76.49:0,76,1980	0/0:22,0:22:50.98:0,51,1163	0/0:21,0:21:45.06:0,45,1092	0/0:22,0:21:36.50:0,37,1072	0/0:9,0:9:8.47:0,8,181	0/0:35,0:35:71.99:0,72,1028	0/0:13,0:13:29.89:0,30,649	0/0:15,0:15:40.20:0,40,446	0/0:10,0:10:18.51:0,19,472	0/0:24,0:21:30.41:0,30,401	0/0:13,0:13:11.67:0,12,333	0/0:10,0:10:24:0,24,345	0/0:29,0:28:50.88:0,51,826	0/0:11,0:11:18.49:0,18,277	1/1:10,12:27:48.87:1320,49,0	0/0:23,0:23:37.18:0,37,552	1/1:6,0:6:11.87:84,12,0
chr10	84698621	.	TGGGAGA	T	11776.30	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=17.770;DP=810;FS=4.626;HRun=0;HaplotypeScore=173.9964;InbreedingCoeff=0.9986;MQ=80.86;MQ0=0;MQRankSum=-18.223;QD=53.05;ReadPosRankSum=-2.779;VQSLOD=4.3608;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:67,0:67:99:0,190,6468	0/0:7,0:7:18.06:0,18,635	0/0:26,0:26:69.24:0,69,2223	0/0:25,0:25:66.22:0,66,2087	0/0:30,0:30:87.30:0,87,3022	0/0:29,0:30:84.29:0,84,2921	1/1:7,21:28:60.12:1193,60,0	1/1:3,25:28:75.22:1614,75,0	0/0:35,0:35:99:0,105,3620	0/0:29,0:29:78.27:0,78,2737	0/0:18,0:18:51.18:0,51,1759	0/0:31,0:31:81.24:0,81,2742	0/0:25,0:25:75.17:0,75,2369	0/0:31,0:31:87.26:0,87,2832	0/0:37,0:37:99:0,99,3499	0/0:38,0:38:99:0,108,3656	0/0:40,0:40:99:0,117,4020	0/0:27,0:27:78.24:0,78,2529	1/1:1,18:19:54.15:1166,54,0	1/1:2,19:21:51.17:1116,51,0	1/1:11,24:35:48.89:945,49,0	1/1:2,17:19:54.14:1164,54,0	0/0:21,0:21:57.20:0,57,1998	0/0:43,0:43:99:0,120,4134	0/0:28,0:28:81.28:0,81,2812	1/1:0,30:30:90.31:2059,90,0	1/1:1,31:32:84.29:1890,84,0	1/1:0,10:10:27.09:629,27,0
chr10	84699143	.	T	TC	3856.46	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-2.459;DP=596;FS=0.435;HRun=0;HaplotypeScore=73.7522;InbreedingCoeff=0.9995;MQ=84.29;MQ0=0;MQRankSum=-1.825;QD=45.37;ReadPosRankSum=1.026;VQSLOD=3.6493;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,56:56:99:2538,160,0	0/0:11,0:11:30.10:0,30,414	0/0:16,0:16:45.14:0,45,589	0/0:21,0:21:60.04:0,60,766	0/0:16,0:16:48.16:0,48,670	0/0:21,0:21:63.21:0,63,880	0/0:29,0:29:87.24:0,87,1160	0/0:17,0:17:51.17:0,51,714	0/0:17,0:17:51.17:0,51,712	0/0:11,0:11:29.74:0,30,419	0/0:13,0:13:39.13:0,39,544	0/0:23,0:23:69.22:0,69,945	0/0:18,0:18:54.17:0,54,738	0/0:15,0:15:45.14:0,45,612	0/0:29,0:29:87.29:0,87,1216	0/0:27,0:27:81.25:0,81,1113	0/0:22,0:22:66.17:0,66,881	0/0:23,0:23:66.22:0,66,921	0/0:13,0:13:39.13:0,39,545	0/0:15,0:15:45.15:0,45,629	0/0:39,0:39:99:0,114,1574	0/0:18,0:18:54.18:0,54,755	0/0:23,0:23:63.21:0,63,875	0/0:29,0:29:84.28:0,84,1175	0/0:13,0:13:39.10:0,39,524	1/1:0,17:17:48.15:744,48,0	0/0:32,0:31:96.30:0,96,1315	1/1:0,12:12:36.12:575,36,0
chr10	84701762	.	CGTCTGTGTTAGGAAGG	C	2680.81	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=0.527;DP=646;FS=8.178;HRun=0;HaplotypeScore=284.2752;InbreedingCoeff=0.4376;MQ=79.32;MQ0=0;MQRankSum=-2.314;QD=17.41;ReadPosRankSum=-5.322;VQSLOD=-0.2109;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,3:18:50.99:962,51,0	0/0:10,0:10:30.06:0,30,1413	0/0:19,0:19:49.70:0,50,1575	0/0:25,0:25:60.36:0,60,2431	0/0:16,0:16:45.11:0,45,2806	0/0:15,0:15:44.92:0,45,2527	0/1:34,0:32:96.65:97,0,3767	0/1:30,0:29:99:187,0,2661	0/0:20,0:20:59.97:0,60,3095	0/0:28,0:28:81.20:0,81,5208	0/0:11,0:11:33.07:0,33,1902	0/0:29,0:29:87.21:0,87,5434	0/0:22,0:22:66.14:0,66,3875	0/0:31,0:31:93.14:0,93,5644	0/0:31,0:31:93.14:0,93,4727	0/0:35,0:35:98.85:0,99,5209	0/0:40,0:40:99:0,120,7039	0/0:21,0:21:63.14:0,63,3800	0/1:19,0:18:99:150,0,1326	0/1:28,0:28:75.43:75,0,3191	0/0:34,0:34:24.80:0,25,4749	0/0:13,0:13:11.12:0,11,2252	0/0:23,0:23:66.18:0,66,4142	0/0:26,0:26:78.18:0,78,4481	0/0:24,0:23:69.17:0,69,4666	1/1:1,16:17:2.33:1205,2,0	0/0:19,0:19:10.05:0,10,2645	1/1:7,0:7:20.87:160,21,0
chr10	84701870	.	G	GA	1004.49	PASS	AB=0.901;AC=18;AF=0.375;AN=48;BaseQRankSum=7.969;DP=375;FS=11.749;HRun=1;HaplotypeScore=48.6441;InbreedingCoeff=0.5015;MQ=43.89;MQ0=67;MQRankSum=-5.785;QD=11.96;ReadPosRankSum=-4.022;VQSLOD=-0.2822;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,2:7:60.96:61,0,116	0/1:2,0:2:13.97:14,0,33	./.	./.	0/0:11,0:9:18.02:0,18,233	0/0:9,0:8:15.05:0,15,194	0/1:21,10:23:91.61:92,0,399	0/1:5,0:3:21.61:31,0,22	0/0:24,0:22:51.17:0,51,662	1/1:1,2:3:6.02:90,6,0	1/1:2,2:3:3.01:45,3,0	0/0:20,0:19:45.14:0,45,571	0/0:26,0:26:75.24:0,75,971	0/0:17,0:17:39.13:0,39,506	0/0:22,0:22:57.14:0,57,740	1/1:7,5:11:29.90:332,30,0	1/1:5,6:10:27:346,27,0	0/0:38,0:37:99:0,108,1382	1/1:1,1:2:6.02:81,6,0	1/1:1,1:2:5.95:61,6,0	./.	1/1:1,0:1:2.97:20,3,0	0/0:11,0:7:12.04:0,12,156	0/0:29,0:28:81.19:0,81,989	0/0:13,0:9:18.06:0,18,234	0/0:12,0:8:24.08:0,24,311	./.	0/0:5,0:5:9.03:0,9,115
chr10	84701928	.	T	TGGGA	533.10	PASS	AB=0.902;AC=7;AF=0.175;AN=40;BaseQRankSum=3.895;DP=309;FS=27.906;HRun=0;HaplotypeScore=90.5639;InbreedingCoeff=0.2270;MQ=35.26;MQ0=69;MQRankSum=-2.077;QD=21.32;ReadPosRankSum=-3.146;VQSLOD=1.3621;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:9:20.89:0,21,304	./.	./.	./.	0/0:10,0:9:11.92:0,12,127	0/0:11,0:7:15.02:0,15,238	0/1:6,0:5:9.92:47,0,10	1/1:3,0:2:3.01:41,3,0	0/0:25,0:23:35.75:0,36,725	./.	./.	0/0:27,0:24:42.24:0,42,834	0/0:16,0:13:29.77:0,30,469	0/0:24,0:20:36.09:0,36,731	0/0:21,0:20:36.11:0,36,713	0/1:3,0:3:53.57:130,0,54	1/1:1,0:1:3.01:57,3,0	0/0:31,0:29:48.16:0,48,959	0/0:1,0:1:3:0,3,25	./.	0/1:7,5:12:83.13:371,0,83	./.	0/0:5,0:4:6:0,6,87	0/0:39,0:36:32.96:0,33,597	0/0:8,0:4:3:0,3,26	0/0:5,0:5:14.91:0,15,152	./.	0/0:2,0:2:5.99:0,6,49
chr10	84701994	.	GA	G	1084.53	PASS	AB=0.625;AC=19;AF=0.432;AN=44;BaseQRankSum=7.229;DP=348;FS=53.725;HRun=2;HaplotypeScore=74.9824;InbreedingCoeff=0.5113;MQ=38.75;MQ0=64;MQRankSum=-0.228;QD=17.49;ReadPosRankSum=-0.423;VQSLOD=0.2912;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:11.92:114,12,0	1/1:0,1:1:3.01:39,3,0	./.	./.	0/0:6,0:6:3.01:0,3,45	0/0:20,0:16:39.13:0,39,561	./.	./.	0/0:28,0:23:51.01:0,51,735	1/1:0,2:2:5.99:61,6,0	1/1:0,2:2:3.01:39,3,0	0/0:29,0:25:42.94:0,43,614	0/0:22,0:18:30.57:0,31,450	0/0:28,0:25:44.49:0,44,609	0/0:26,0:22:40.23:0,40,565	0/1:3,5:8:99:170,0,101	1/1:0,3:3:9.03:116,9,0	0/0:26,0:24:42.13:0,42,606	1/1:2,0:2:6:51,6,0	./.	0/1:6,13:19:61.31:209,0,61	1/1:0,5:5:15.05:191,15,0	0/0:6,0:6:6.02:0,6,90	0/0:39,0:37:65.93:0,66,898	0/0:12,0:8:12.04:0,12,180	0/1:7,7:13:99:218,0,188	./.	1/1:0,1:1:3.01:39,3,0
chr10	84702231	.	GA	G	160.90	PASS	AB=0.833;AC=10;AF=0.278;AN=36;BaseQRankSum=3.879;DP=311;FS=18.931;HRun=2;HaplotypeScore=46.5935;InbreedingCoeff=0.5061;MQ=38.53;MQ0=76;MQRankSum=-4.079;QD=14.63;ReadPosRankSum=0.465;VQSLOD=1.6012;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,1:1:3.01:39,3,0	./.	./.	0/0:9,0:5:8.99:0,9,109	0/0:18,0:12:15.05:0,15,215	./.	./.	0/0:30,0:27:54:0,54,767	0/1:2,0:2:18.79:19,0,32	./.	0/0:19,0:16:39.13:0,39,582	0/0:17,0:16:36.06:0,36,499	0/0:30,0:27:51:0,51,756	0/0:25,0:23:27.68:0,28,612	1/1:0,2:2:6.02:77,6,0	1/1:0,3:3:6.02:77,6,0	0/0:29,0:25:38.94:0,39,560	0/0:1,0:1:3.01:0,3,45	1/1:0,1:1:3.01:39,3,0	./.	0/1:1,1:2:3.07:33,0,3	0/0:9,0:5:3.01:0,3,45	0/0:45,0:40:73.46:0,73,1039	0/0:18,0:14:12.01:0,12,155	./.	./.	./.
chr10	84702282	.	G	GAA	962.65	PASS	AB=0.729;AC=16;AF=0.333;AN=48;BaseQRankSum=7.316;DP=340;FS=52.658;HRun=0;HaplotypeScore=54.1110;InbreedingCoeff=0.6891;MQ=49.75;MQ0=17;MQRankSum=-7.409;QD=17.50;ReadPosRankSum=1.095;VQSLOD=1.1901;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:2,3:2:13.71:44,0,14	0/0:0,3:1:0:0,0,0	0/0:23,0:7:18.06:0,18,251	0/0:19,0:4:12.04:0,12,196	0/0:7,0:7:18.06:0,18,293	0/0:10,0:10:27.09:0,27,440	0/0:1,2:1:2.97:0,3,20	./.	0/0:26,0:26:72.25:0,72,1161	./.	./.	0/0:21,0:21:57.19:0,57,926	0/0:18,0:18:51.17:0,51,831	0/0:27,0:27:78.27:0,78,1262	0/0:21,0:21:60.20:0,60,974	1/1:0,5:5:15.05:283,15,0	1/1:0,7:5:14.41:232,14,0	0/0:29,0:29:84.22:0,84,1299	0/1:0,1:3:2.69:3,0,3	1/1:0,5:4:6.02:113,6,0	1/1:0,2:4:6.02:111,6,0	1/1:0,9:6:6.02:114,6,0	0/0:8,0:8:18.06:0,18,293	0/0:42,0:42:99:0,120,1914	0/0:12,0:8:24.08:0,24,391	1/1:0,8:3:9.03:170,9,0	./.	1/1:0,4:2:3.01:56,3,0
chr10	84702386	.	G	GA	285.79	PASS	AB=0.835;AC=5;AF=0.147;AN=34;BaseQRankSum=5.020;DP=303;FS=6.714;HRun=1;HaplotypeScore=44.6376;InbreedingCoeff=0.0723;MQ=44.54;MQ0=61;MQRankSum=0.677;QD=8.17;ReadPosRankSum=-2.241;VQSLOD=-0.1789;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:3:13.94:17,0,14	0/0:2,0:2:3.01:0,3,39	./.	./.	./.	0/0:7,0:3:3:0,3,25	0/1:10,12:22:99:320,0,155	./.	0/0:22,0:20:51.16:0,51,656	./.	0/0:7,0:6:7.27:0,7,80	0/0:24,0:22:63.10:0,63,793	0/0:19,0:17:42.07:0,42,510	0/0:21,0:20:54.13:0,54,666	0/0:19,0:19:45.12:0,45,551	0/0:7,0:7:15.05:0,15,194	0/0:8,0:6:8.99:0,9,98	0/0:33,0:33:96.22:0,96,1189	./.	./.	1/1:0,1:1:2.50:9,2,0	./.	./.	0/0:30,0:30:81.25:0,81,1039	0/0:8,0:3:8.94:0,9,94	0/1:5,1:2:32.92:37,0,33	./.	./.
chr10	84704729	.	GA	G	4872.70	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.565;DP=735;FS=5.739;HRun=1;HaplotypeScore=72.7065;InbreedingCoeff=1.0000;MQ=91.36;MQ0=0;MQRankSum=-6.088;QD=40.61;ReadPosRankSum=2.942;VQSLOD=5.6054;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,2157	1/1:0,16:16:48.16:671,48,0	0/0:26,0:26:78.23:0,78,1173	0/0:33,0:33:90.77:0,91,1367	0/0:30,0:30:90.26:0,90,1361	0/0:20,0:20:60.20:0,60,954	0/0:18,0:18:54.18:0,54,854	0/0:25,0:24:72.25:0,72,1150	0/0:20,0:20:60.19:0,60,936	1/1:0,29:29:87.29:1214,87,0	1/1:0,21:21:63.21:879,63,0	0/0:25,0:25:75.26:0,75,1191	0/0:24,0:24:72.20:0,72,1092	0/0:39,0:39:99:0,117,1822	0/0:28,0:28:84.29:0,84,1340	1/1:0,24:24:66.22:923,66,0	1/1:1,29:30:86.96:1186,87,0	0/0:13,0:13:39.13:0,39,623	0/0:30,0:30:90.29:0,90,1387	0/0:23,0:23:69.22:0,69,1070	0/0:34,0:34:99:0,99,1572	0/0:22,0:22:66.23:0,66,1055	0/0:31,0:31:93.30:0,93,1438	0/0:21,0:21:63.19:0,63,975	0/0:21,0:21:63.20:0,63,974	0/0:32,0:32:96.29:0,96,1502	0/0:39,0:39:99:0,117,1870	0/0:15,0:15:45.15:0,45,713
chr10	84705378	.	A	AACACACAC	3616.39	PASS	AB=1.000;AC=33;AF=0.660;AN=50;BaseQRankSum=0.674;DP=613;FS=8.080;HRun=0;HaplotypeScore=178.0089;InbreedingCoeff=0.3884;MQ=67.42;MQ0=14;MQRankSum=-3.248;QD=8.84;ReadPosRankSum=-3.694;VQSLOD=1.1674;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:14.28:160,14,0	1/1:6,0:5:9.01:166,9,0	./.	./.	0/0:24,0:24:15.93:0,16,317	0/1:18,0:19:8.17:8,0,203	1/1:27,0:29:2.98:146,3,0	1/1:28,0:27:24.36:254,24,0	0/1:14,0:14:33.02:33,0,331	1/1:23,0:22:29.72:537,30,0	1/1:7,0:7:6:72,6,0	0/0:24,0:25:12.82:0,13,365	0/0:12,0:12:5.11:0,5,123	0/0:26,0:26:7.86:0,8,339	0/1:26,0:27:25.60:26,0,192	1/1:12,1:23:9.03:309,9,0	1/1:31,0:31:20.27:317,20,0	0/1:23,0:24:53.71:54,0,253	1/1:20,0:20:5.04:54,5,0	1/1:10,4:16:3.01:122,3,0	0/1:30,0:29:8.87:249,0,9	1/1:18,0:18:9:165,9,0	./.	0/0:30,0:33:29.78:0,30,592	0/0:14,0:14:13.25:0,13,147	1/1:14,12:27:18.66:450,19,0	1/1:8,3:14:2.92:122,3,0	1/1:13,1:14:17.16:374,17,0
chr10	84706235	.	CT	C	334.79	PASS	AB=0.839;AC=5;AF=0.089;AN=56;BaseQRankSum=1.580;DP=377;FS=0.000;HRun=15;HaplotypeScore=42.7039;InbreedingCoeff=0.3572;MQ=65.97;MQ0=6;MQRankSum=-0.345;QD=4.35;ReadPosRankSum=2.114;VQSLOD=0.0835;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,23:28:58.14:371,58,0	0/0:5,0:5:0:0,0,0	0/0:30,1:12:13.20:0,13,96	0/0:9,0:7:2.99:0,3,23	0/0:14,1:16:10.31:0,10,181	0/1:10,4:15:44.23:44,0,139	0/0:3,0:7:14.48:0,14,88	0/0:16,0:16:0:0,0,0	0/0:10,0:10:17.95:0,18,151	0/0:17,0:17:0:0,0,0	0/0:7,0:7:0:0,0,0	0/0:3,0:3:5.87:0,6,42	0/0:14,0:13:23.95:0,24,199	0/1:9,1:11:1.28:1,0,109	0/0:11,0:12:14.80:0,15,110	0/0:8,0:8:0:0,0,0	0/0:9,0:8:0:0,0,0	0/0:9,0:10:8.10:0,8,87	0/0:12,0:12:0.47:0,0,1	0/0:24,0:24:1.41:0,1,3	0/0:8,0:8:0.47:0,0,1	0/0:18,0:18:0.47:0,0,1	0/1:18,3:21:21.25:21,0,177	0/0:8,0:8:9:0,9,79	0/0:15,1:20:35.56:0,36,276	0/0:10,0:10:0.47:0,0,1	0/0:18,0:18:0:0,0,0	0/0:5,0:4:0:0,0,0
chr10	84707215	.	AGGC	A	13597.16	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=19.059;DP=641;FS=2.944;HRun=0;HaplotypeScore=130.5905;InbreedingCoeff=0.9748;MQ=78.43;MQ0=0;MQRankSum=-6.040;QD=47.88;ReadPosRankSum=2.099;VQSLOD=7.0973;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,3238	1/1:0,13:13:33.11:613,33,0	0/0:15,0:15:3.27:0,3,878	0/0:18,0:18:47.99:0,48,1020	0/0:25,0:25:75.26:0,75,1818	0/0:23,0:23:69.24:0,69,1642	0/0:26,0:26:78.25:0,78,1851	1/1:0,23:23:69.21:1198,69,0	0/0:20,0:20:60.19:0,60,1428	1/1:0,28:28:81.27:1469,81,0	1/1:0,21:21:60.21:1117,60,0	0/0:22,0:22:66.23:0,66,1602	0/0:23,0:23:69.24:0,69,1695	0/0:23,0:23:69.22:0,69,1623	0/0:28,0:28:84.29:0,84,2061	1/1:0,17:17:42.14:782,42,0	1/1:0,29:29:81.23:1473,81,0	0/0:19,0:19:57.20:0,57,1396	1/1:0,21:21:63.22:1169,63,0	1/1:0,19:19:54.19:1005,54,0	1/1:0,42:42:90.27:1640,90,0	1/1:0,17:17:36.12:671,36,0	0/0:22,0:22:63.22:0,63,1551	0/0:23,0:23:69.22:0,69,1639	0/0:24,0:24:69.24:0,69,1665	1/1:0,12:12:36.12:670,36,0	1/1:0,34:34:81.28:1510,81,0	1/1:0,8:8:15.05:280,15,0
chr10	84708087	.	T	TA	2227.88	PASS	AB=0.538;AC=9;AF=0.161;AN=56;BaseQRankSum=-8.745;DP=576;FS=4.066;HRun=10;HaplotypeScore=61.2146;InbreedingCoeff=0.9014;MQ=69.79;MQ0=0;MQRankSum=1.660;QD=22.50;ReadPosRankSum=2.505;VQSLOD=4.7642;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:58.66:0,59,490	0/1:1,6:7:3.59:171,0,4	0/0:20,1:17:23.66:0,24,232	0/0:14,0:12:20.58:0,21,132	0/0:33,0:33:80.89:0,81,665	0/0:23,0:23:62.88:0,63,514	0/0:15,0:15:32.83:0,33,259	0/0:20,0:21:24.22:0,24,322	0/0:21,0:21:56.93:0,57,468	1/1:3,12:15:14.42:349,14,0	1/1:5,17:22:53.81:553,54,0	0/0:14,0:14:32.92:0,33,267	0/0:18,0:18:37.20:0,37,298	0/0:14,0:14:32.96:0,33,271	0/0:23,0:24:61.95:0,62,497	1/1:3,17:20:42.11:448,42,0	1/1:5,30:35:62.58:871,63,0	0/0:19,0:20:49.90:0,50,388	0/0:14,0:14:20.97:0,21,172	0/0:23,1:26:35.07:0,35,470	0/0:16,0:17:46.98:0,47,375	0/0:21,0:21:47.92:0,48,394	0/0:24,0:24:59.90:0,60,492	0/0:32,0:33:85.91:0,86,692	0/0:25,0:26:73.95:0,74,596	0/0:18,0:18:47.86:0,48,386	0/0:28,0:29:78.76:0,79,626	0/0:8,0:8:20.96:0,21,172
chr10	84708318	.	GATGCAGAGTCCT	G	9950.53	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=6.075;DP=593;FS=16.515;HRun=0;HaplotypeScore=237.6471;InbreedingCoeff=0.7712;MQ=76.11;MQ0=0;MQRankSum=-10.095;QD=41.99;ReadPosRankSum=-3.164;VQSLOD=2.8381;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:48,0:48:5.59:6,0,5921	0/0:11,0:11:32.93:0,33,992	0/0:19,0:20:60.01:0,60,2201	0/0:9,0:9:9.03:0,9,579	0/0:18,0:18:54.19:0,54,3024	0/0:23,0:23:69.20:0,69,3883	0/0:30,0:30:17.30:0,17,4030	1/1:0,25:25:72.08:1905,72,0	0/0:22,0:22:66.23:0,66,4003	0/1:21,0:21:3.84:4,0,1623	0/1:22,0:22:17.97:18,0,1492	0/0:25,0:25:72.20:0,72,4294	0/0:20,0:20:60.17:0,60,3452	0/0:22,0:22:66.21:0,66,3880	0/0:19,0:19:57.16:0,57,3157	0/0:27,0:27:81.26:0,81,2839	0/0:26,0:26:25.27:0,25,2269	0/0:24,0:24:69.21:0,69,4138	1/1:0,12:12:32.97:823,33,0	1/1:0,22:22:33.11:1303,33,0	1/1:0,21:21:18.06:680,18,0	1/1:0,19:19:39.13:1524,39,0	0/0:15,0:15:45.11:0,45,2251	0/0:31,0:31:87.30:0,87,5298	0/0:14,0:14:42.14:0,42,2483	1/1:1,19:20:35.50:1439,35,0	1/1:0,25:25:51.18:2012,51,0	1/1:0,2:2:6.02:237,6,0
chr10	84708330	.	TC	T	3727.91	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.212;DP=580;FS=2.482;HRun=2;HaplotypeScore=131.4993;InbreedingCoeff=0.9576;MQ=71.21;MQ0=0;MQRankSum=2.823;QD=38.04;ReadPosRankSum=2.328;VQSLOD=3.1893;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,2011	1/1:0,12:12:36.12:504,36,0	0/0:14,0:14:38.65:0,39,530	0/0:6,0:6:10.91:0,11,157	0/0:15,0:15:45.15:0,45,715	0/0:21,0:21:63.21:0,63,1007	0/0:28,0:28:84.29:0,84,1341	0/0:32,0:32:58.02:0,58,287	0/0:21,0:21:63.21:0,63,1004	1/1:0,18:18:48.16:672,48,0	1/1:0,18:18:45.11:607,45,0	0/0:24,0:24:69.24:0,69,1103	0/0:22,0:22:66.23:0,66,1055	0/0:22,0:22:66.23:0,66,1055	0/0:22,0:21:63.21:0,63,1005	1/1:1,26:27:33.30:1043,33,0	1/1:0,23:23:66.19:902,66,0	0/0:24,0:24:69.24:0,69,1103	0/0:15,0:15:21.23:0,21,93	0/0:24,0:24:18.82:0,19,65	0/0:24,0:24:13.71:0,14,43	0/0:19,0:19:15.56:0,16,40	0/0:12,0:12:36.12:0,36,573	0/0:29,0:29:87.24:0,87,1334	0/0:16,0:16:48.16:0,48,766	0/0:19,0:19:23.85:0,24,79	0/0:27,0:27:31.78:0,32,106	0/0:3,0:3:6.33:0,6,28
chr10	84708472	.	G	GA	9729.80	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=1.798;DP=590;FS=2.214;HRun=3;HaplotypeScore=67.7885;InbreedingCoeff=0.9916;MQ=88.75;MQ0=0;MQRankSum=-3.285;QD=37.28;ReadPosRankSum=0.629;VQSLOD=5.2792;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1160	1/1:0,4:4:12.04:168,12,0	0/0:22,0:22:55.96:0,56,662	0/0:22,0:22:57.12:0,57,650	0/0:23,0:23:60.18:0,60,719	0/0:19,0:19:51.16:0,51,612	0/0:37,0:37:96.29:0,96,1151	1/1:1,27:28:81.25:1116,81,0	0/0:19,0:19:57.17:0,57,684	1/1:0,22:22:66.14:848,66,0	1/1:3,15:18:39.13:545,39,0	0/0:18,0:18:45.13:0,45,528	0/0:10,0:10:30.07:0,30,345	0/0:19,0:19:57.14:0,57,659	0/0:21,0:21:60.18:0,60,720	1/1:1,15:16:12.18:593,12,0	1/1:0,36:36:99:1386,99,0	0/0:22,0:22:63.19:0,63,756	1/1:3,17:20:51.17:713,51,0	1/1:0,21:21:60.20:839,60,0	1/1:2,25:27:66.22:924,66,0	1/1:2,16:18:42.05:543,42,0	0/0:18,0:18:45.14:0,45,539	0/0:22,0:22:66.20:0,66,792	0/0:23,0:23:66.19:0,66,780	1/1:0,17:17:51.17:713,51,0	1/1:0,13:12:39.13:545,39,0	1/1:0,21:21:57.19:796,57,0
chr10	84708776	.	T	TC	5847.32	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-9.426;DP=463;FS=0.386;HRun=0;HaplotypeScore=46.3676;InbreedingCoeff=0.9669;MQ=60.08;MQ0=20;MQRankSum=-0.710;QD=26.58;ReadPosRankSum=1.508;VQSLOD=5.0498;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:36.08:0,36,475	1/1:0,3:3:6.02:77,6,0	0/0:24,0:13:12.95:0,13,131	0/0:8,0:3:8.98:0,9,78	0/0:23,0:22:60.10:0,60,718	0/0:17,0:17:48.10:0,48,619	0/0:6,0:6:18.06:0,18,249	1/1:5,21:22:44.13:636,44,0	0/0:22,0:22:54.07:0,54,641	1/1:0,18:18:45.12:542,45,0	1/1:1,20:20:44.81:496,45,0	0/0:12,0:12:27.05:0,27,325	0/0:11,0:10:20.54:0,21,249	0/0:13,0:12:30.01:0,30,371	0/0:16,0:16:48.12:0,48,614	1/1:0,14:14:36.04:429,36,0	1/1:2,24:23:45.14:571,45,0	0/0:27,0:27:69.18:0,69,883	1/1:3,13:13:39.09:471,39,0	1/1:0,23:22:62.88:719,63,0	1/1:2,5:6:12.04:155,12,0	1/1:0,13:13:26.92:298,27,0	0/0:13,0:13:30.01:0,30,362	0/0:10,0:9:27.08:0,27,359	0/0:23,0:22:60.13:0,60,748	1/1:2,17:18:51.12:619,51,0	1/1:1,23:24:38.53:561,39,0	1/1:2,7:7:21.07:271,21,0
chr10	84709248	.	GT	G	914.07	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.449;DP=657;FS=1.396;HRun=7;HaplotypeScore=79.2567;InbreedingCoeff=0.9934;MQ=68.70;MQ0=0;MQRankSum=4.553;QD=22.29;ReadPosRankSum=2.390;VQSLOD=3.7525;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,37:41:99:1009,99,0	0/0:11,0:11:27.09:0,27,340	0/0:29,0:24:38.31:0,38,526	0/0:14,0:14:19.87:0,20,222	0/0:23,0:23:57.14:0,57,696	0/0:23,0:23:66.21:0,66,826	0/0:36,0:36:99:0,99,1202	0/0:35,0:35:78.61:0,79,960	0/0:30,0:30:81.25:0,81,1005	0/0:22,0:22:60.19:0,60,753	0/0:21,0:21:57.15:0,57,692	0/0:22,0:22:63.18:0,63,768	0/0:17,0:17:42.08:0,42,509	0/0:22,0:22:63.20:0,63,792	0/0:17,0:17:39.11:0,39,478	0/0:24,0:24:63.18:0,63,764	0/0:27,0:27:75.21:0,75,917	0/0:30,0:30:84.27:0,84,1052	0/0:25,0:25:69.21:0,69,858	0/0:16,0:16:48.15:0,48,598	0/0:30,0:30:87.25:0,87,1065	0/0:16,0:16:42.12:0,42,508	0/0:25,0:25:60.19:0,60,749	0/0:20,0:20:48.14:0,48,592	0/0:14,0:14:39.12:0,39,482	0/0:23,0:23:69.22:0,69,860	0/0:28,0:28:78.15:0,78,926	0/0:15,0:15:40.94:0,41,491
chr10	84710309	.	A	AAAC	2417.27	PASS	AB=0.717;AC=11;AF=0.196;AN=56;BaseQRankSum=1.822;DP=504;FS=13.932;HRun=0;HaplotypeScore=99.5806;InbreedingCoeff=0.0925;MQ=63.65;MQ0=8;MQRankSum=-5.247;QD=13.28;ReadPosRankSum=0.748;VQSLOD=2.2467;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:72.57:0,73,458	0/0:7,0:7:13.27:0,13,123	0/1:41,0:12:38.71:39,0,128	0/0:31,0:10:2.01:0,2,59	0/0:31,0:31:85.71:0,86,1150	0/0:16,0:16:48.05:0,48,598	0/0:8,0:8:17.72:0,18,231	0/1:7,9:17:19.74:475,0,20	0/0:10,0:10:27.02:0,27,365	0/0:13,0:12:34.41:0,34,262	0/0:17,0:17:36.91:0,37,418	0/0:11,0:11:29.38:0,29,367	0/0:12,0:12:36.05:0,36,445	0/0:11,0:11:33.07:0,33,439	0/0:15,0:15:45.06:0,45,607	0/0:9,0:9:17.99:0,18,174	0/0:33,0:32:78.01:0,78,771	0/0:12,0:12:36.03:0,36,455	0/1:12,9:20:99:421,0,105	0/1:10,13:23:99:487,0,186	1/1:0,2:2:3.01:57,3,0	0/1:4,4:8:45.06:115,0,45	0/0:23,0:23:56.72:0,57,617	0/0:11,0:11:27.09:0,27,414	0/0:21,0:21:60.06:0,60,745	0/1:19,10:29:99:485,0,242	0/1:16,19:36:99:376,0,229	1/1:4,1:5:6.02:109,6,0
chr10	84710313	.	A	AC	2625.30	PASS	AB=0.954;AC=18;AF=0.321;AN=56;BaseQRankSum=-1.354;DP=511;FS=12.803;HRun=0;HaplotypeScore=82.8656;InbreedingCoeff=0.3416;MQ=63.44;MQ0=8;MQRankSum=-1.888;QD=9.05;ReadPosRankSum=4.276;VQSLOD=2.8810;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,1:33:68.08:360,68,0	1/1:0,7:7:15.02:180,15,0	0/1:43,0:12:5.28:5,0,78	0/0:32,0:10:6.99:0,7,43	0/0:30,0:30:83.62:0,84,1001	0/0:17,0:17:47.92:0,48,507	0/0:7,0:7:18.61:0,19,206	0/1:18,0:18:73.47:73,0,98	0/0:10,0:10:30.01:0,30,336	1/1:2,12:13:36.05:395,36,0	0/1:9,9:18:4.41:380,0,4	0/0:11,0:11:28.18:0,28,306	0/0:12,0:12:35.93:0,36,367	0/0:11,0:11:30.05:0,30,366	0/0:14,0:14:40.34:0,40,487	1/1:2,8:11:17.79:198,18,0	1/1:3,29:34:74.22:849,74,0	0/0:13,0:13:39.03:0,39,434	0/1:23,0:22:60.76:61,0,148	0/1:19,0:19:74.56:75,0,117	0/0:2,0:2:2.84:0,3,14	0/0:8,0:8:1.94:0,2,64	0/0:21,0:21:53.12:0,53,550	0/0:11,0:11:29.99:0,30,370	0/0:22,0:22:61.23:0,61,636	0/1:29,1:30:95.90:135,0,96	0/1:34,0:34:68.55:90,0,69	0/1:5,0:5:8.70:9,0,9
chr10	84710319	.	C	CAAAAAA	4999.65	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=2.209;DP=497;FS=8.002;HRun=15;HaplotypeScore=122.8870;InbreedingCoeff=0.5353;MQ=61.87;MQ0=8;MQRankSum=-8.150;QD=20.24;ReadPosRankSum=-2.041;VQSLOD=1.4663;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:54.78:0,55,383	0/1:6,0:6:1.51:2,0,107	0/1:38,0:11:16.20:16,0,45	0/1:32,0:11:8.32:8,0,31	0/0:30,0:30:40.59:0,41,805	0/0:17,0:17:38.36:0,38,511	0/1:7,0:7:3.35:3,0,142	1/1:18,0:19:41.16:469,41,0	0/0:11,0:11:26.93:0,27,422	0/1:13,0:12:16.47:16,0,171	0/1:16,0:16:26.95:27,0,318	0/0:11,0:11:20.07:0,20,312	0/0:11,0:11:24.05:0,24,432	0/0:13,0:13:29.83:0,30,324	0/0:14,0:14:29.18:0,29,529	0/0:9,0:9:23.92:0,24,205	0/0:36,0:35:89.87:0,90,945	0/0:13,0:13:23.30:0,23,429	1/1:20,1:20:57.71:619,58,0	1/1:15,5:21:58.56:981,59,0	1/1:1,0:1:2.97:20,3,0	1/1:7,0:7:17.97:189,18,0	0/0:18,0:18:14.79:0,15,623	0/0:12,0:12:6.08:0,6,284	0/0:23,0:23:6.11:0,6,597	1/1:25,4:29:78.22:1240,78,0	1/1:26,5:31:75.02:1289,75,0	1/1:4,1:5:5.97:121,6,0
chr10	84710994	.	G	GA	3918.02	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=3.157;DP=536;FS=3.313;HRun=2;HaplotypeScore=83.4705;InbreedingCoeff=0.9023;MQ=74.20;MQ0=1;MQRankSum=4.225;QD=23.05;ReadPosRankSum=-3.040;VQSLOD=2.7981;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:26.37:0,26,165	0/0:13,0:12:19.81:0,20,100	0/0:18,0:14:22.51:0,23,200	0/1:12,0:9:17.91:18,0,18	0/0:21,0:21:42.24:0,42,499	0/0:24,0:24:58.79:0,59,569	0/0:21,0:21:62.98:0,63,574	1/1:20,2:22:66.09:702,66,0	0/0:12,0:12:27.32:0,27,285	0/0:24,0:24:50.02:0,50,321	0/0:22,0:22:15.33:0,15,136	0/0:19,0:19:48.13:0,48,552	0/0:20,0:20:54.03:0,54,566	0/0:7,0:7:18.02:0,18,185	0/0:27,0:27:78.55:0,79,765	0/0:15,0:15:15.38:0,15,95	0/0:29,0:29:55.52:0,56,327	0/0:10,0:10:29.74:0,30,287	1/1:25,3:28:78.09:816,78,0	1/1:21,2:23:59.35:574,59,0	1/1:7,0:7:15.03:159,15,0	1/1:18,1:19:43.73:440,44,0	0/0:27,0:27:74.60:0,75,706	0/0:13,0:13:12.72:0,13,305	0/0:22,0:22:52.78:0,53,537	1/1:26,1:27:34.08:658,34,0	1/1:21,2:23:33.94:347,34,0	1/1:8,1:9:18.05:205,18,0
chr10	84710996	.	A	AAT	6276.95	PASS	AB=0.657;AC=24;AF=0.429;AN=56;BaseQRankSum=2.000;DP=568;FS=13.505;HRun=0;HaplotypeScore=97.3342;InbreedingCoeff=0.5080;MQ=73.98;MQ0=1;MQRankSum=1.139;QD=19.43;ReadPosRankSum=-1.304;VQSLOD=4.1966;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:22:41.70:42,0,90	1/1:1,0:15:0.28:41,0,0	0/0:18,0:14:33.81:0,34,229	0/1:14,0:11:29.20:42,0,29	0/0:18,0:22:58.86:0,59,617	0/0:19,0:22:58.79:0,59,669	0/0:5,0:21:63.10:0,63,694	1/1:3,20:23:69.11:1050,69,0	0/0:11,0:13:33.12:0,33,368	0/1:9,0:28:92.39:92,0,161	0/1:11,0:28:63.89:129,0,64	0/0:16,0:21:56.02:0,56,682	0/0:18,0:18:54.04:0,54,662	0/0:8,0:9:17.86:0,18,216	0/0:22,0:27:78.90:0,79,888	0/1:3,0:15:42.37:42,0,50	0/1:12,0:31:26.82:27,0,179	0/0:10,0:10:29.74:0,30,334	1/1:4,23:27:81.06:1124,81,0	1/1:3,18:24:59.89:784,60,0	1/1:0,6:6:15.05:278,15,0	1/1:3,16:20:46.27:696,46,0	0/0:25,0:28:79.64:0,80,827	0/0:12,0:14:32.45:0,32,419	0/0:20,0:21:57.48:0,57,659	1/1:2,18:28:76.26:1026,76,0	1/1:3,21:27:33.98:570,34,0	1/1:4,7:14:6.99:333,7,0
chr10	84711378	.	CT	C	2054.26	PASS	AB=0.821;AC=18;AF=0.321;AN=56;BaseQRankSum=6.261;DP=527;FS=0.000;HRun=14;HaplotypeScore=62.7194;InbreedingCoeff=0.7685;MQ=84.94;MQ0=4;MQRankSum=-0.140;QD=10.87;ReadPosRankSum=0.685;VQSLOD=3.2389;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:22:50.87:0,51,451	0/1:3,1:5:6.27:6,0,56	0/0:46,0:32:18.46:0,18,167	0/0:24,0:14:13.65:0,14,81	0/0:23,3:26:30.42:0,30,406	0/0:13,0:13:12.45:0,12,258	0/0:11,2:13:0.44:0,0,147	1/1:14,22:37:41.59:423,42,0	0/0:19,0:19:39.04:0,39,362	0/1:13,4:17:19.95:20,0,158	0/0:17,2:19:3.71:0,4,301	0/0:19,0:19:41.56:0,42,349	0/0:9,0:9:17.94:0,18,156	0/0:15,1:16:15.46:0,15,286	0/0:15,0:15:26.40:0,26,273	0/0:16,0:16:9.75:0,10,226	0/0:26,0:27:52.23:0,52,516	0/0:8,0:8:17.99:0,18,156	1/1:3,16:20:46.64:314,47,0	1/1:7,16:24:43.58:290,44,0	1/1:4,17:21:16.78:260,17,0	1/1:2,10:13:25.69:164,26,0	0/0:16,0:16:26.31:0,26,292	0/0:11,1:12:15.40:0,15,272	0/0:16,0:16:36.04:0,36,334	1/1:2,12:15:40.62:267,41,0	1/1:2,19:21:41.64:288,42,0	1/1:5,11:16:32.20:225,32,0
chr10	84711447	.	C	CA	257.88	PASS	AB=0.801;AC=2;AF=0.036;AN=56;BaseQRankSum=5.621;DP=419;FS=2.578;HRun=1;HaplotypeScore=57.2027;InbreedingCoeff=-0.0395;MQ=92.50;MQ0=0;MQRankSum=5.473;QD=7.37;ReadPosRankSum=-2.899;VQSLOD=-0.1686;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.19:0,57,740	0/0:3,0:3:9.03:0,9,117	0/1:13,6:19:99:284,0,244	0/1:13,3:16:62.79:63,0,365	0/0:24,0:24:69.22:0,69,896	0/0:19,0:19:51.15:0,51,647	0/0:14,0:14:36.12:0,36,467	0/0:19,0:19:57.15:0,57,701	0/0:16,0:16:48.16:0,48,623	0/0:13,0:13:36.12:0,36,468	0/0:20,0:20:60.20:0,60,779	0/0:13,0:13:36.12:0,36,465	0/0:8,0:8:21.07:0,21,273	0/0:17,0:17:48.16:0,48,623	0/0:10,0:10:30.10:0,30,389	0/0:9,0:9:27.09:0,27,350	0/0:19,0:19:54.18:0,54,701	0/0:9,0:9:27.09:0,27,350	0/0:12,0:12:36.12:0,36,466	0/0:18,0:18:54.18:0,54,701	0/0:15,0:15:33.11:0,33,429	0/0:15,0:15:45.15:0,45,584	0/0:17,0:17:45.15:0,45,584	0/0:13,0:13:39.13:0,39,506	0/0:10,0:10:30.10:0,30,390	0/0:18,0:18:51.17:0,51,662	0/0:21,0:20:54.18:0,54,701	0/0:12,0:12:36.12:0,36,467
chr10	84712176	.	C	CCCACCTAGAAAGGG	16010.15	PASS	AB=0.949;AC=11;AF=0.196;AN=56;BaseQRankSum=-2.395;DP=673;FS=13.916;HRun=0;HaplotypeScore=245.2478;InbreedingCoeff=0.8797;MQ=88.28;MQ0=0;MQRankSum=-14.077;QD=115.18;ReadPosRankSum=-0.266;VQSLOD=3.4727;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,4117	1/1:1,6:7:21.07:1375,21,0	0/0:27,0:27:60.67:0,61,2144	0/0:26,0:26:66.19:0,66,2229	0/0:28,0:28:78.27:0,78,3143	0/0:27,0:27:78.27:0,78,3089	0/0:26,0:26:78.26:0,78,3168	0/0:32,0:32:90.30:0,90,3334	0/0:18,0:18:48.15:0,48,1817	1/1:15,9:28:84.29:4731,84,0	1/1:9,6:16:39.13:1982,39,0	0/0:27,0:27:75.23:0,75,2936	0/0:23,0:23:66.23:0,66,2645	0/0:21,0:21:63.18:0,63,2431	0/0:18,0:18:51.14:0,51,2046	1/1:11,16:31:75.21:4523,75,0	1/1:13,4:20:45.15:2889,45,0	0/0:20,0:20:57.20:0,57,2293	0/0:18,0:18:51.18:0,51,1979	0/0:29,0:29:87.30:0,87,3484	0/0:27,0:27:78.27:0,78,3186	0/0:19,0:19:54.19:0,54,2179	0/0:19,0:19:51.18:0,51,2065	0/0:24,0:24:72.25:0,72,2860	0/0:28,0:28:72.21:0,72,2740	0/1:35,2:37:99:510,0,3805	0/0:34,0:34:93.32:0,93,3932	0/0:4,0:3:12.04:0,12,507
chr10	84712446	.	CCA	C	5355.99	PASS	AB=1.000;AC=17;AF=0.315;AN=54;BaseQRankSum=9.769;DP=620;FS=7.335;HRun=0;HaplotypeScore=83.7589;InbreedingCoeff=0.8095;MQ=65.41;MQ0=3;MQRankSum=-2.478;QD=24.68;ReadPosRankSum=3.110;VQSLOD=5.2684;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:55:11.98:0,12,103	./.	0/0:32,0:30:56.05:0,56,979	0/0:23,0:21:3.05:0,3,512	0/0:22,1:23:20.27:0,20,844	0/0:21,1:22:17.19:0,17,742	0/0:26,0:26:66.23:0,66,1077	1/1:11,18:29:54.15:652,54,0	0/0:13,1:14:2.19:0,2,545	0/0:22,0:22:39.95:0,40,463	0/0:9,0:9:4.77:0,5,24	0/0:20,0:21:3.93:0,4,721	0/0:13,0:13:33.11:0,33,534	0/0:12,0:12:33.11:0,33,530	0/0:24,1:25:29.28:0,29,991	0/0:18,0:18:5.96:0,6,43	0/0:19,0:19:11.92:0,12,104	0/0:23,1:24:35.20:0,35,1005	1/1:6,15:23:50.80:565,51,0	1/1:6,12:18:36.11:443,36,0	1/1:6,22:28:60.19:739,60,0	1/1:6,13:19:39.12:480,39,0	0/0:18,0:18:45.15:0,45,724	0/0:23,0:23:63.13:0,63,940	0/1:15,0:15:3.81:4,0,456	1/1:7,21:28:63.20:776,63,0	1/1:3,23:25:63.20:776,63,0	1/1:4,27:29:75.24:923,75,0
chr10	84713269	.	T	TA	674.76	PASS	AB=0.541;AC=5;AF=0.089;AN=56;BaseQRankSum=-4.857;DP=553;FS=0.638;HRun=11;HaplotypeScore=63.1306;InbreedingCoeff=0.7394;MQ=76.33;MQ0=0;MQRankSum=-2.807;QD=14.67;ReadPosRankSum=-1.324;VQSLOD=3.5940;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:65.70:0,66,509	0/0:4,0:4:11.95:0,12,93	0/0:18,1:20:3.61:0,4,188	0/0:19,0:19:37.01:0,37,261	0/0:26,0:26:41.01:0,41,463	0/0:15,0:15:38.81:0,39,298	0/1:3,17:20:4.39:323,0,4	0/0:28,0:30:60.04:0,60,433	0/0:22,2:24:20.29:0,20,336	0/0:22,0:22:53.77:0,54,415	0/0:18,0:18:41.65:0,42,314	0/0:19,0:19:47.73:0,48,363	0/0:17,0:17:41.81:0,42,322	0/0:11,0:11:17.91:0,18,139	0/0:22,0:22:44.75:0,45,348	0/0:12,0:12:29.87:0,30,231	0/0:42,0:43:99:0,106,795	0/0:18,0:18:53.79:0,54,418	0/0:10,0:10:20.86:0,21,157	0/0:19,1:21:10.44:0,10,254	0/0:13,0:13:23.89:0,24,186	0/0:23,1:24:32.28:0,32,434	0/0:21,0:23:28.90:0,29,351	0/0:20,0:21:55.82:0,56,424	0/0:20,1:22:28.34:0,28,388	1/1:5,14:19:9.81:274,10,0	0/0:21,0:23:39.91:0,40,290	1/1:2,5:7:21.01:200,21,0
chr10	84713893	.	T	TG	246.08	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.116;DP=297;FS=1.335;HRun=6;HaplotypeScore=37.6574;InbreedingCoeff=0.5338;MQ=70.50;MQ0=0;MQRankSum=-0.602;QD=14.48;ReadPosRankSum=0.259;VQSLOD=2.2191;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:17:27.09:340,27,0	0/0:6,0:6:9.02:0,9,92	0/0:9,0:9:24.03:0,24,236	0/0:5,0:5:9.02:0,9,92	0/0:3,0:3:8.99:0,9,82	0/0:10,0:10:24.05:0,24,244	0/0:36,0:36:87.10:0,87,867	0/0:14,0:14:36.07:0,36,362	0/0:4,0:4:9.02:0,9,92	0/0:12,0:12:30.07:0,30,306	0/0:1,0:1:3.01:0,3,31	0/0:12,0:12:36.08:0,36,367	0/0:6,0:6:18.04:0,18,183	0/0:12,0:12:27.06:0,27,275	0/0:7,0:7:18.04:0,18,184	0/0:7,0:7:18.04:0,18,182	0/0:7,0:7:9.02:0,9,92	0/0:21,0:21:60.14:0,60,612	0/0:10,0:10:30.02:0,30,293	0/0:3,0:3:6.01:0,6,61	0/0:31,0:31:78.16:0,78,788	0/0:6,0:6:12.03:0,12,122	0/0:9,0:9:18.04:0,18,184	0/0:25,0:25:60.13:0,60,611	0/0:3,0:3:9.02:0,9,92	0/0:7,0:7:21.05:0,21,214	0/0:11,0:12:27.05:0,27,275	0/0:2,0:2:6:0,6,55
chr10	84715940	.	TC	T	1216.10	PASS	AB=0.697;AC=32;AF=0.800;AN=40;BaseQRankSum=1.074;DP=120;FS=23.332;HRun=6;HaplotypeScore=49.1443;InbreedingCoeff=0.3139;MQ=55.26;MQ0=0;MQRankSum=-1.289;QD=11.37;ReadPosRankSum=1.862;VQSLOD=0.7478;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:24.02:241,24,0	./.	1/1:4,0:1:0.89:2,1,0	0/0:5,0:3:3.01:0,3,32	./.	0/1:1,1:2:1.13:27,0,1	1/1:2,15:17:7.09:163,7,0	./.	1/1:0,3:3:9.02:96,9,0	./.	0/0:1,0:1:3.01:0,3,39	1/1:2,6:8:9.91:97,10,0	./.	1/1:0,5:5:6.01:63,6,0	1/1:1,3:4:6.01:63,6,0	./.	0/0:1,0:1:2.99:0,3,24	1/1:1,5:6:14.06:129,14,0	1/1:0,2:2:6.02:64,6,0	./.	1/1:4,12:16:10.67:102,11,0	1/1:0,2:2:3.01:32,3,0	1/1:2,0:2:2.96:19,3,0	0/1:5,3:8:8.71:32,0,9	1/1:2,2:4:6.02:64,6,0	1/1:4,0:4:11.93:91,12,0	./.	1/1:2,0:2:5.94:42,6,0
chr10	84716516	.	GTT	G	1680.22	PASS	AB=0.759;AC=28;AF=0.500;AN=56;BaseQRankSum=4.951;DP=504;FS=6.567;HRun=16;HaplotypeScore=74.2070;InbreedingCoeff=0.5494;MQ=65.12;MQ0=3;MQRankSum=-0.328;QD=5.37;ReadPosRankSum=3.597;VQSLOD=-0.4567;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,11:30:11.39:316,0,11	1/1:3,0:9:16.34:70,16,0	0/1:30,0:11:3.34:3,0,29	0/0:16,0:9:8.21:0,8,55	0/0:20,0:23:32.37:0,32,316	0/0:15,0:19:17.86:0,18,296	0/1:10,2:25:13.35:13,0,154	1/1:5,12:19:34.95:255,35,0	0/0:17,0:17:39.10:0,39,412	1/1:13,1:19:22.16:120,22,0	1/1:5,0:13:12.58:51,13,0	0/0:15,1:17:9.66:0,10,282	0/0:6,0:8:11.38:0,11,108	0/0:19,0:19:20.61:0,21,390	0/0:13,0:18:35.09:0,35,385	1/1:5,0:16:14.35:67,14,0	1/1:9,0:35:53.69:226,54,0	0/0:24,0:27:62.10:0,62,593	1/1:9,6:16:11.52:128,12,0	1/1:6,9:16:20.09:157,20,0	0/1:7,8:15:9.48:85,0,9	0/1:10,4:15:49.33:79,0,49	0/0:12,0:14:31.80:0,32,335	0/0:12,0:13:26.43:0,26,306	0/1:12,1:14:12.85:13,0,208	1/1:11,5:17:20.22:148,20,0	1/1:3,8:12:3.24:68,3,0	1/1:4,3:10:14.09:85,14,0
chr10	84717182	.	TC	T	2609.39	PASS	AB=0.955;AC=53;AF=0.946;AN=56;BaseQRankSum=-2.278;DP=326;FS=2.981;HRun=1;HaplotypeScore=30.1510;InbreedingCoeff=0.1488;MQ=52.57;MQ0=55;MQRankSum=-0.463;QD=9.92;ReadPosRankSum=0.166;VQSLOD=1.2918;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:9:10.83:152,11,0	1/1:4,0:2:5.96:43,6,0	0/1:40,2:10:58.49:58,0,76	0/0:61,2:15:0.92:0,1,43	1/1:14,0:13:28.21:160,28,0	1/1:7,0:6:17.07:122,17,0	1/1:7,0:7:17.94:145,18,0	1/1:15,0:12:24.89:205,25,0	1/1:6,0:5:13.72:95,14,0	1/1:8,12:15:28.92:195,29,0	1/1:2,13:13:11.87:80,12,0	1/1:5,0:5:10.56:54,11,0	1/1:4,0:3:5.91:38,6,0	1/1:3,0:2:3.06:8,3,0	1/1:3,0:2:5.98:48,6,0	1/1:7,0:6:14.88:105,15,0	1/1:13,0:12:30.39:249,30,0	1/1:2,0:2:2.80:19,3,0	1/1:15,0:7:11.99:107,12,0	1/1:2,10:11:2.98:21,3,0	1/1:6,0:4:10.25:84,10,0	1/1:1,0:1:3:28,3,0	1/1:5,0:2:6:51,6,0	1/1:5,0:2:5.65:31,6,0	1/1:6,0:5:11.89:86,12,0	1/1:15,0:13:28.98:219,29,0	1/1:9,0:9:22.40:156,22,0	1/1:9,0:7:17.99:153,18,0
chr10	84717321	.	G	GA	2719.55	PASS	AB=0.917;AC=54;AF=0.964;AN=56;BaseQRankSum=-0.298;DP=227;FS=1.197;HRun=1;HaplotypeScore=59.0628;InbreedingCoeff=-0.0459;MQ=70.31;MQ0=0;MQRankSum=-4.946;QD=11.98;ReadPosRankSum=1.479;VQSLOD=2.1487;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:6:12.13:66,12,0	1/1:4,0:4:5.01:27,5,0	0/1:4,1:5:32.42:32,0,43	0/1:13,0:13:15.75:16,0,115	1/1:10,0:10:16.32:61,16,0	1/1:7,1:8:14.53:99,15,0	1/1:16,1:17:18.78:145,19,0	1/1:3,3:6:11.30:111,11,0	1/1:5,0:5:12.37:103,12,0	1/1:14,0:14:30.48:206,30,0	1/1:9,1:10:9.80:65,10,0	1/1:4,0:4:4.72:17,5,0	1/1:3,0:3:6.96:24,7,0	1/1:5,0:5:11.90:59,12,0	1/1:5,0:5:10.64:60,11,0	1/1:5,0:5:5.85:18,6,0	1/1:6,1:7:7.57:84,8,0	1/1:5,1:6:17.92:213,18,0	1/1:8,1:9:14.01:73,14,0	1/1:11,0:11:22.54:143,23,0	1/1:16,0:16:34.12:294,34,0	1/1:8,0:8:15.47:76,15,0	1/1:2,0:2:4.26:42,4,0	1/1:4,0:4:10.86:62,11,0	1/1:10,0:10:19.58:75,20,0	1/1:9,0:9:22.45:142,22,0	1/1:9,0:9:23.41:145,23,0	1/1:14,1:15:41.05:363,41,0
chr10	84717329	.	A	AGT	2313.06	PASS	AB=0.772;AC=54;AF=0.964;AN=56;BaseQRankSum=-3.057;DP=206;FS=1.153;HRun=0;HaplotypeScore=81.4116;InbreedingCoeff=0.0122;MQ=83.32;MQ0=0;MQRankSum=-5.022;QD=11.23;ReadPosRankSum=1.497;VQSLOD=3.4072;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:4:10.73:46,11,0	1/1:3,0:3:2.50:9,2,0	0/1:6,5:11:83.17:233,0,83	0/1:10,0:12:32.30:32,0,157	1/1:9,0:9:13.69:124,14,0	1/1:5,0:5:10.76:44,11,0	1/1:15,0:15:11.95:81,12,0	1/1:5,0:5:8.84:70,9,0	1/1:4,0:4:7.84:32,8,0	1/1:17,0:17:32.63:260,33,0	1/1:11,0:11:13.87:104,14,0	1/1:3,0:3:5.67:29,6,0	1/1:3,0:3:8.49:41,8,0	1/1:3,0:3:7.89:31,8,0	1/1:5,0:5:10.23:38,10,0	1/1:7,0:7:7.59:27,8,0	1/1:5,0:5:2.37:8,2,0	1/1:2,0:2:5.74:37,6,0	1/1:8,0:8:14.73:101,15,0	1/1:10,0:10:20.60:94,21,0	1/1:14,0:14:26.75:189,27,0	1/1:6,0:6:11.09:52,11,0	1/1:1,0:1:2.37:8,2,0	1/1:4,0:4:11.12:51,11,0	1/1:9,0:9:23.76:122,24,0	1/1:7,0:7:17.55:137,18,0	1/1:9,0:9:22.13:138,22,0	1/1:13,0:13:35.65:275,36,0
chr10	84718027	.	TTTTTG	T	710.29	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.814;DP=503;FS=0.000;HRun=0;HaplotypeScore=93.1844;InbreedingCoeff=0.8210;MQ=64.61;MQ0=2;MQRankSum=0.401;QD=35.51;ReadPosRankSum=0.264;VQSLOD=3.2337;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,16:20:42.14:805,42,0	0/0:6,0:6:15.05:0,15,430	0/0:21,0:17:38.78:0,39,712	0/0:12,0:8:5.31:0,5,115	0/0:29,0:29:69.22:0,69,1893	0/0:17,0:17:39.11:0,39,1054	0/0:11,0:11:29.94:0,30,659	0/0:25,0:25:57.18:0,57,1453	0/0:17,0:17:42.14:0,42,1132	0/0:19,0:19:48.08:0,48,1243	0/0:17,0:17:45.13:0,45,1205	0/0:21,0:21:54.19:0,54,1548	0/0:14,0:14:36.12:0,36,1015	0/0:14,0:14:39.13:0,39,1110	0/0:18,0:18:51.16:0,51,1379	0/0:19,0:19:51.18:0,51,1442	0/0:34,0:34:93.28:0,93,2499	0/0:22,0:22:58.44:0,58,1507	0/0:26,0:26:57.17:0,57,1472	0/0:25,0:25:60.21:0,60,1688	0/0:7,0:7:15.05:0,15,430	0/0:11,0:11:24.01:0,24,601	0/0:16,0:16:33.11:0,33,901	0/0:12,0:12:21.07:0,21,559	0/0:18,0:18:39.13:0,39,1068	0/0:22,0:22:54.18:0,54,1466	0/0:25,0:25:63.21:0,63,1777	0/0:5,0:5:9.03:0,9,225
chr10	84718939	.	C	CAAA	1613.11	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=0.154;DP=481;FS=3.540;HRun=13;HaplotypeScore=82.6257;InbreedingCoeff=0.8122;MQ=82.35;MQ0=1;MQRankSum=-1.498;QD=18.76;ReadPosRankSum=-3.165;VQSLOD=2.1113;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:23.99:0,24,250	1/1:1,3:5:9.03:161,9,0	0/0:28,0:17:3.99:0,4,56	0/0:21,0:19:10.34:0,10,77	0/0:29,0:31:65.68:0,66,650	0/0:14,0:15:41.92:0,42,409	0/0:14,0:14:23.03:0,23,295	0/0:14,0:17:8.39:0,8,263	0/0:15,0:15:27.78:0,28,288	1/1:8,13:22:45.08:628,45,0	1/1:12,6:20:37.16:463,37,0	0/0:15,0:17:32.69:0,33,307	0/0:18,0:19:32.40:0,32,302	0/0:11,0:15:27.07:0,27,310	0/0:12,0:13:21.31:0,21,238	1/1:4,13:17:16.55:237,17,0	1/1:1,8:9:15.05:268,15,0	0/0:15,0:17:25.18:0,25,268	0/0:19,0:22:38.68:0,39,376	0/0:20,0:25:32.24:0,32,325	0/0:7,0:7:21.05:0,21,224	0/0:9,0:11:19.65:0,20,195	0/0:16,0:16:35.97:0,36,359	0/1:13,0:13:28.26:28,0,169	0/0:16,0:18:34.72:0,35,353	0/0:22,0:24:38.86:0,39,437	0/0:18,0:18:48.04:0,48,502	0/0:19,0:21:56.96:0,57,584
chr10	84720649	.	TCA	T	3624.86	PASS	AB=0.818;AC=32;AF=0.571;AN=56;BaseQRankSum=3.037;DP=484;FS=0.000;HRun=0;HaplotypeScore=93.7535;InbreedingCoeff=0.6573;MQ=66.64;MQ0=7;MQRankSum=4.420;QD=12.67;ReadPosRankSum=7.238;VQSLOD=2.9454;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:2.72:0,3,38	1/1:2,0:7:10.89:50,11,0	0/0:27,0:14:16.09:0,16,192	0/1:37,1:24:42.19:42,0,45	1/1:8,13:22:41.95:460,42,0	0/1:5,6:11:8.92:122,0,9	0/0:6,0:15:27.01:0,27,250	0/0:20,0:20:29.43:0,29,290	1/1:6,8:14:23.90:254,24,0	1/1:5,0:15:25.57:125,26,0	1/1:5,0:20:33.47:161,33,0	1/1:8,10:20:32.76:337,33,0	1/1:0,5:5:12.03:137,12,0	1/1:5,10:15:27.08:309,27,0	1/1:4,12:17:29.92:323,30,0	1/1:3,0:9:17.04:84,17,0	1/1:3,0:9:8.52:42,9,0	0/1:7,8:15:10.09:196,0,10	0/0:16,0:16:26.99:0,27,294	0/0:23,0:22:9:0,9,94	0/1:11,0:11:0:0,0,0	0/0:16,0:18:2.80:0,3,14	1/1:10,12:23:35.93:391,36,0	1/1:6,8:14:21.06:240,21,0	1/1:7,11:21:35.60:351,36,0	0/0:14,0:13:18.48:0,18,199	0/0:23,0:26:14.95:0,15,141	0/0:10,0:10:2.90:0,3,20
chr10	84720884	.	GAT	G	5379.32	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=8.913;DP=361;FS=0.873;HRun=0;HaplotypeScore=57.5844;InbreedingCoeff=0.7329;MQ=77.41;MQ0=0;MQRankSum=-0.658;QD=27.17;ReadPosRankSum=2.860;VQSLOD=5.7667;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:20:48.16:747,48,0	0/1:6,0:6:23.37:23,0,34	0/0:19,0:14:13.69:0,14,235	0/0:16,0:9:17.46:0,17,212	0/0:14,0:15:42.10:0,42,732	0/0:15,0:15:45.04:0,45,784	0/0:15,0:15:41.90:0,42,335	1/1:0,24:25:65.84:866,66,0	0/0:9,0:9:26.09:0,26,416	0/1:10,0:10:34.47:34,0,53	0/1:16,0:16:7.59:47,0,8	0/0:10,0:10:29.23:0,29,418	0/0:12,0:12:36.08:0,36,604	0/0:12,0:12:36.07:0,36,591	0/0:8,0:8:24.06:0,24,444	1/1:11,0:11:2.72:38,3,0	1/1:16,0:16:6.13:59,6,0	0/0:14,0:14:39.09:0,39,673	1/1:0,24:25:72.13:1025,72,0	1/1:0,9:9:24.07:384,24,0	1/1:0,10:10:21.07:337,21,0	1/1:0,8:8:20.90:262,21,0	0/0:9,0:9:26.99:0,27,441	0/0:2,0:2:6.02:0,6,119	0/0:7,0:7:21.05:0,21,382	1/1:0,17:18:48.07:655,48,0	1/1:0,14:14:36.12:554,36,0	1/1:0,9:10:23.75:346,24,0
chr10	84720885	.	ATT	A	3536.46	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=10.398;DP=359;FS=0.465;HRun=12;HaplotypeScore=64.2315;InbreedingCoeff=0.9637;MQ=76.39;MQ0=0;MQRankSum=-2.082;QD=17.95;ReadPosRankSum=1.388;VQSLOD=2.5997;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:47.69:366,48,0	1/1:2,4:6:12.01:122,12,0	0/0:18,0:14:14.86:0,15,138	0/0:15,0:8:9.78:0,10,162	0/0:13,0:15:41.10:0,41,536	0/0:15,0:15:36.12:0,36,527	0/0:2,0:14:27.45:0,27,97	1/1:25,0:25:44.47:311,44,0	0/0:9,0:9:18.06:0,18,268	1/1:2,7:9:21.04:214,21,0	1/1:1,15:16:39.05:397,39,0	0/0:10,0:10:20.56:0,21,277	0/0:11,0:11:27.09:0,27,403	0/0:11,0:11:30.06:0,30,404	0/0:8,0:8:21.07:0,21,314	1/1:1,10:11:24.05:244,24,0	1/1:1,15:16:36.07:366,36,0	0/0:14,0:14:30.10:0,30,448	1/1:25,0:25:36.94:389,37,0	1/1:9,0:9:23.84:179,24,0	1/1:10,0:10:20.88:156,21,0	1/1:8,0:8:14.92:117,15,0	0/0:10,0:10:27.07:0,27,363	0/0:4,0:4:12.03:0,12,159	0/0:6,0:7:20.56:0,21,277	1/1:18,0:18:35.50:249,35,0	1/1:14,0:14:35.84:281,36,0	1/1:10,0:10:7.27:145,7,0
chr10	84721250	.	GT	G	3697.81	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=10.136;DP=421;FS=1.849;HRun=6;HaplotypeScore=43.2935;InbreedingCoeff=0.9709;MQ=79.07;MQ0=0;MQRankSum=-1.833;QD=28.44;ReadPosRankSum=-0.108;VQSLOD=3.7864;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:78.20:838,78,0	0/0:4,0:4:6.02:0,6,79	0/0:16,0:16:33.01:0,33,396	0/0:10,0:10:11.52:0,12,267	0/0:9,0:9:27.08:0,27,344	0/0:15,0:15:42.13:0,42,544	0/0:18,0:18:42.14:0,42,550	1/1:1,12:13:36.09:387,36,0	0/0:21,0:21:60.18:0,60,774	0/0:9,0:9:27.09:0,27,355	0/0:9,0:9:27.09:0,27,355	0/0:16,0:16:42.11:0,42,525	0/0:14,0:14:36.08:0,36,431	0/0:19,0:19:51.14:0,51,642	0/0:21,0:21:60.18:0,60,764	0/0:22,0:22:63.19:0,63,812	0/0:35,0:35:93.30:0,93,1224	0/0:7,0:7:21.07:0,21,273	1/1:1,17:18:48.12:514,48,0	1/1:0,7:7:21.04:220,21,0	1/1:2,22:24:54.13:580,54,0	1/1:0,5:5:15.04:161,15,0	0/0:5,0:5:15.05:0,15,194	0/0:30,0:30:78.25:0,78,1026	0/0:11,0:11:24.05:0,24,276	1/1:0,11:11:30.07:322,30,0	1/1:1,15:16:39.10:419,39,0	1/1:0,9:9:24.06:257,24,0
chr10	84721442	.	CT	C	1391.57	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.794;DP=401;FS=8.152;HRun=8;HaplotypeScore=46.6729;InbreedingCoeff=0.9257;MQ=76.71;MQ0=0;MQRankSum=-0.525;QD=21.08;ReadPosRankSum=1.434;VQSLOD=3.2832;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:38.80:0,39,622	1/1:1,6:7:15.02:145,15,0	0/0:20,0:14:26.20:0,26,283	0/0:19,0:14:0.54:0,1,162	0/0:13,0:13:33.10:0,33,399	0/0:17,0:17:42.12:0,42,497	0/0:8,0:8:21.06:0,21,254	0/0:28,0:28:75.21:0,75,887	0/0:12,0:12:36.08:0,36,418	1/1:1,11:12:33.05:319,33,0	1/1:1,21:22:63.10:608,63,0	0/0:11,0:11:27.07:0,27,312	0/0:12,0:12:27.08:0,27,326	0/0:14,0:14:33.10:0,33,398	0/0:14,0:14:30.09:0,30,362	1/1:2,10:12:21.03:203,21,0	1/1:0,13:13:30.05:290,30,0	0/0:22,0:22:63.18:0,63,749	0/0:23,0:23:60.18:0,60,716	0/0:7,0:7:18.06:0,18,217	0/0:13,0:13:33.10:0,33,398	0/0:5,0:5:15.05:0,15,181	0/0:13,0:13:39.10:0,39,454	0/0:6,0:6:18.05:0,18,207	0/0:10,0:9:30.09:0,30,362	0/0:15,0:15:13.15:0,13,442	0/0:22,0:22:60.18:0,60,718	0/0:9,0:9:27.08:0,27,326
chr10	84722416	.	TTTG	T	729.14	PASS	AB=0.973;AC=8;AF=0.143;AN=56;BaseQRankSum=8.475;DP=571;FS=5.396;HRun=0;HaplotypeScore=92.2610;InbreedingCoeff=0.5152;MQ=45.73;MQ0=39;MQRankSum=0.894;QD=4.77;ReadPosRankSum=3.415;VQSLOD=1.0747;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:35:69.98:0,70,721	1/1:11,0:10:15.74:68,16,0	0/1:22,0:2:0.02:0,0,0	0/0:22,0:4:5.59:0,6,26	0/0:22,0:19:47.58:0,48,651	0/0:19,0:17:47.64:0,48,510	0/0:18,0:18:30:0,30,436	0/0:29,0:29:74.93:0,75,933	0/0:17,0:11:17.79:0,18,416	0/1:29,2:29:23.92:254,0,24	1/1:30,3:31:20.58:238,21,0	0/0:16,0:12:12.15:0,12,447	0/0:13,0:13:29.40:0,29,409	0/0:16,0:14:42.04:0,42,570	0/0:7,0:6:18.05:0,18,247	0/1:16,0:13:4.79:55,0,5	0/1:38,2:32:29.21:253,0,29	0/0:19,0:17:20.04:0,20,567	0/0:16,0:12:31.54:0,32,394	0/0:26,0:24:43.10:0,43,779	0/0:9,0:6:17.97:0,18,270	0/0:11,0:10:23.97:0,24,408	0/0:21,0:20:51.50:0,51,725	0/0:15,0:11:10.50:0,10,142	0/0:21,0:19:56.09:0,56,769	0/0:21,1:21:19.15:0,19,623	0/0:14,0:11:26.86:0,27,354	0/0:27,0:25:53.85:0,54,816
chr10	84722417	.	TTG	T	1976.68	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=5.601;DP=571;FS=3.448;HRun=0;HaplotypeScore=80.0684;InbreedingCoeff=0.8972;MQ=45.30;MQ0=41;MQRankSum=2.021;QD=13.18;ReadPosRankSum=2.056;VQSLOD=2.9183;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:35:72.74:0,73,548	1/1:2,9:10:18:199,18,0	0/1:21,0:2:0.01:0,0,0	0/0:21,0:4:0.77:0,1,18	0/0:22,0:19:36.91:0,37,447	0/0:18,0:16:36.67:0,37,350	0/0:17,0:17:24.86:0,25,248	0/0:29,0:29:53.84:0,54,717	0/0:17,0:11:29.13:0,29,324	1/1:6,21:25:62.72:621,63,0	1/1:8,25:31:55.29:611,55,0	0/0:16,0:12:24.14:0,24,314	0/0:15,0:14:32.72:0,33,352	0/0:16,0:14:38.94:0,39,414	0/0:7,0:6:17.89:0,18,177	1/1:9,7:13:17.65:192,18,0	1/1:37,4:32:23.41:525,23,0	0/0:20,0:18:36.25:0,36,521	0/0:15,0:11:25.63:0,26,280	0/0:26,0:24:54.26:0,54,596	0/0:9,0:6:15.97:0,16,185	0/0:12,0:11:26.97:0,27,350	0/0:23,0:21:51.13:0,51,560	0/0:15,0:11:12.22:0,12,111	0/0:21,0:19:26.82:0,27,549	0/0:23,0:21:28.97:0,29,470	0/0:15,0:11:26.69:0,27,267	0/0:26,0:24:46.82:0,47,564
chr10	84722418	.	TGG	T	1070.54	PASS	AB=0.900;AC=11;AF=0.196;AN=56;BaseQRankSum=7.722;DP=548;FS=3.853;HRun=2;HaplotypeScore=80.5351;InbreedingCoeff=0.9015;MQ=44.97;MQ0=43;MQRankSum=0.893;QD=7.33;ReadPosRankSum=2.781;VQSLOD=0.7567;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:35:74.37:0,74,870	1/1:10,0:10:15.62:108,16,0	0/1:16,2:2:0:0,0,0	0/0:14,1:3:0.89:0,1,2	0/0:21,0:18:45.12:0,45,587	0/0:17,0:15:38.70:0,39,509	0/0:16,0:16:35.68:0,36,379	0/0:27,1:28:70.64:0,71,920	0/0:17,0:11:29.97:0,30,378	1/1:26,0:25:23.38:149,23,0	1/1:29,0:31:53.94:335,54,0	0/0:16,0:12:27.40:0,27,353	0/0:14,0:13:24.25:0,24,340	0/0:16,0:13:35.93:0,36,447	0/0:7,0:6:17.84:0,18,187	1/1:11,2:12:17.40:132,17,0	1/1:30,10:33:10.45:513,10,0	0/0:20,0:18:34.14:0,34,528	0/0:16,1:13:16.85:0,17,426	0/0:24,0:22:48.14:0,48,681	0/0:10,0:7:15.92:0,16,210	0/0:12,0:11:27.02:0,27,393	0/0:22,0:20:47.07:0,47,608	0/0:15,0:11:14.41:0,14,163	0/0:18,0:16:47.79:0,48,647	0/0:17,0:15:21.55:0,22,455	0/0:16,0:12:30.07:0,30,385	0/0:25,0:23:18.56:0,19,485
chr10	84723578	.	G	GGA	173.16	PASS	AB=0.670;AC=10;AF=0.179;AN=56;BaseQRankSum=5.929;DP=482;FS=13.696;HRun=0;HaplotypeScore=75.0258;InbreedingCoeff=0.0268;MQ=62.32;MQ0=8;MQRankSum=-1.186;QD=1.15;ReadPosRankSum=-3.145;VQSLOD=-0.6624;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:42:99:0,114,1436	0/1:2,0:4:16.89:17,0,19	0/0:19,0:5:8.96:0,9,94	0/1:18,0:5:13.70:14,0,28	0/0:21,0:23:67.49:0,67,779	0/0:16,0:18:49.73:0,50,706	0/0:1,0:14:27.20:0,27,127	0/1:11,0:28:99:99,0,283	0/0:17,0:18:44.43:0,44,597	0/1:8,1:13:40.02:40,0,97	1/1:1,0:8:13.58:73,14,0	0/0:13,0:14:42.13:0,42,625	0/0:14,0:15:42.10:0,42,583	0/0:10,0:11:32.22:0,32,405	0/0:18,0:19:49.01:0,49,731	0/0:7,0:16:4.59:0,5,155	0/1:12,0:30:25.74:26,0,138	0/0:16,0:16:36.95:0,37,550	0/1:8,0:18:15.20:15,0,171	0/1:2,0:14:31.11:31,0,39	0/0:7,0:11:28.62:0,29,268	0/1:4,0:12:0.45:0,0,71	0/0:9,0:10:30.05:0,30,389	0/0:15,0:15:30.38:0,30,531	0/0:8,0:9:27.04:0,27,354	0/0:8,0:18:13.69:0,14,160	0/0:8,0:24:23.55:0,24,147	0/0:6,0:15:25.56:0,26,127
chr10	84724123	.	TTC	T	13013.13	PASS	AB=0.531;AC=29;AF=0.518;AN=56;BaseQRankSum=12.337;DP=613;FS=1.004;HRun=0;HaplotypeScore=75.3424;InbreedingCoeff=0.9357;MQ=84.08;MQ0=2;MQRankSum=-4.565;QD=35.36;ReadPosRankSum=2.032;VQSLOD=6.7608;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,53:55:99:2203,159,0	1/1:0,7:7:21.07:294,21,0	0/0:25,0:25:63.22:0,63,1107	0/0:18,0:18:48.12:0,48,821	0/0:24,0:24:66.21:0,66,1153	0/0:18,0:18:48.16:0,48,864	1/1:4,18:22:48.16:672,48,0	1/1:1,21:22:60.20:839,60,0	0/0:31,0:31:90.29:0,90,1553	1/1:3,23:25:63.21:880,63,0	1/1:2,19:21:51.17:714,51,0	0/0:13,0:13:39.13:0,39,697	0/0:18,0:18:51.17:0,51,908	0/0:13,0:13:39.13:0,39,702	0/0:20,0:20:60.21:0,60,1074	0/1:2,15:17:8.93:521,0,9	1/1:0,28:28:75.25:1050,75,0	0/0:15,0:15:42.14:0,42,756	1/1:3,21:24:63.21:882,63,0	1/1:1,24:25:57.19:798,57,0	1/1:1,28:28:69.23:966,69,0	1/1:3,11:14:27.09:378,27,0	0/0:10,0:10:27.08:0,27,451	0/0:28,0:28:84.27:0,84,1472	0/0:12,0:12:33.11:0,33,594	1/1:3,27:30:75.25:1050,75,0	1/1:0,31:31:81.27:1134,81,0	1/1:0,17:17:45.15:630,45,0
chr10	84725585	.	A	ATTTT	3821.88	PASS	AC=50;AF=1.000;AN=50;BaseQRankSum=-1.732;DP=117;FS=0.000;HRun=3;HaplotypeScore=64.1994;InbreedingCoeff=-0.0799;MQ=32.87;MQ0=1;MQRankSum=-1.382;QD=33.82;ReadPosRankSum=0.720;VQSLOD=0.7485;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,7:8:21.07:312,21,0	1/1:1,1:2:3.01:44,3,0	./.	./.	1/1:1,1:2:3.01:43,3,0	1/1:0,4:4:12.04:181,12,0	1/1:1,5:6:15.05:223,15,0	1/1:2,3:5:15.05:235,15,0	1/1:1,0:1:3:25,3,0	1/1:0,3:3:9.03:142,9,0	1/1:2,6:8:23.85:290,24,0	./.	1/1:0,2:2:6.02:87,6,0	1/1:1,4:6:18.05:252,18,0	1/1:4,1:4:6.02:89,6,0	1/1:1,0:1:3.01:43,3,0	1/1:8,9:16:30.77:528,31,0	1/1:3,2:5:12.04:181,12,0	1/1:3,1:4:12.04:190,12,0	1/1:2,1:3:6.02:88,6,0	1/1:1,1:2:3.01:40,3,0	1/1:1,1:2:3.01:43,3,0	1/1:1,2:3:6.02:89,6,0	1/1:1,3:2:6.02:89,6,0	1/1:3,2:5:12.03:151,12,0	1/1:2,2:4:12.04:182,12,0	1/1:1,0:6:6.02:93,6,0	1/1:1,4:5:12.04:181,12,0
chr10	84725600	.	A	AT	472.20	PASS	AC=34;AF=1.000;AN=34;DP=72;FS=0.000;HRun=3;HaplotypeScore=63.8545;InbreedingCoeff=-0.0268;MQ=29.48;MQ0=0;QD=7.87;VQSLOD=0.3894;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,6:7:16.68:76,17,0	1/1:0,1:1:2.74:12,3,0	./.	./.	./.	1/1:1,3:4:8.34:38,8,0	1/1:2,3:5:8.34:39,8,0	./.	./.	1/1:1,2:3:5.60:26,6,0	1/1:3,3:6:8.47:42,8,0	./.	1/1:0,2:2:5.49:24,5,0	1/1:1,4:5:11.14:52,11,0	1/1:0,1:1:2.80:13,3,0	./.	1/1:4,6:10:13.78:63,14,0	1/1:0,2:2:5.88:35,6,0	./.	1/1:0,1:1:2.80:13,3,0	./.	./.	1/1:0,2:2:5.49:25,5,0	1/1:0,3:2:5.54:25,6,0	1/1:0,2:2:5.60:26,6,0	1/1:0,2:2:5.60:26,6,0	./.	1/1:3,1:4:2.80:13,3,0
chr10	84726083	.	AT	A	5414.72	PASS	AC=50;AF=0.962;AN=52;BaseQRankSum=0.712;DP=164;FS=0.000;HRun=3;HaplotypeScore=147.5878;InbreedingCoeff=0.3523;MQ=28.10;MQ0=3;MQRankSum=1.708;QD=34.05;ReadPosRankSum=1.305;VQSLOD=3.8648;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:6:14.88:162,15,0	1/1:0,5:5:15.05:194,15,0	0/0:3,0:1:3:0,3,26	./.	1/1:0,11:11:27.89:322,28,0	1/1:0,7:7:21.07:265,21,0	1/1:0,5:5:15.04:173,15,0	1/1:0,9:9:27.09:350,27,0	1/1:0,5:5:15.04:173,15,0	1/1:1,9:9:27.09:350,27,0	1/1:0,3:3:9.03:116,9,0	1/1:1,4:5:12.03:142,12,0	1/1:0,4:4:12.04:143,12,0	1/1:1,4:5:12.04:155,12,0	1/1:1,4:5:12.04:155,12,0	1/1:0,4:4:12.04:148,12,0	1/1:0,10:9:27.08:335,27,0	1/1:1,3:3:9.03:117,9,0	1/1:4,10:11:27.09:350,27,0	1/1:0,6:6:18.06:226,18,0	1/1:0,2:1:3.01:33,3,0	1/1:0,1:1:3.01:39,3,0	1/1:0,1:1:3.01:39,3,0	./.	1/1:0,7:7:21.07:271,21,0	1/1:0,18:18:54.18:699,54,0	1/1:0,6:6:18.06:227,18,0	1/1:0,6:6:18.06:233,18,0
chr10	84726097	.	G	GT	3780.52	PASS	AC=46;AF=0.958;AN=48;BaseQRankSum=1.699;DP=113;FS=0.000;HRun=1;HaplotypeScore=143.5865;InbreedingCoeff=0.2459;MQ=28.09;MQ0=3;MQRankSum=1.699;QD=35.67;ReadPosRankSum=1.699;VQSLOD=3.2426;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:14.63:157,15,0	1/1:0,3:3:9.03:109,9,0	0/0:4,0:1:2.80:0,3,13	./.	1/1:0,8:8:19.41:216,19,0	1/1:0,6:6:18.06:219,18,0	1/1:0,2:2:6.02:72,6,0	./.	1/1:0,2:2:6.02:72,6,0	1/1:0,9:9:27.09:341,27,0	1/1:0,3:3:9.03:105,9,0	1/1:0,2:2:6.02:73,6,0	1/1:0,2:2:6.02:72,6,0	1/1:0,3:3:9.03:109,9,0	1/1:0,4:4:12.04:152,12,0	1/1:0,3:3:9.03:111,9,0	1/1:0,6:6:18.06:224,18,0	./.	1/1:1,6:6:18.06:233,18,0	1/1:0,5:5:15.05:182,15,0	1/1:0,1:1:3.01:36,3,0	1/1:0,1:1:3.01:35,3,0	1/1:0,1:1:3.01:35,3,0	./.	1/1:0,7:7:21.06:253,21,0	1/1:0,16:16:48.15:604,48,0	1/1:0,5:5:15.05:183,15,0	1/1:0,5:5:15.05:187,15,0
chr10	84726098	.	C	CACTT	6886.18	PASS	AC=46;AF=0.958;AN=48;BaseQRankSum=0.035;DP=113;FS=0.000;HRun=0;HaplotypeScore=136.2841;InbreedingCoeff=0.2490;MQ=28.09;MQ0=3;MQRankSum=1.823;QD=64.96;ReadPosRankSum=2.357;VQSLOD=6.5143;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:14.84:282,15,0	1/1:0,3:3:9.03:202,9,0	0/0:4,0:1:3:0,3,27	./.	1/1:0,8:8:10.76:382,11,0	1/1:0,6:6:18.06:404,18,0	1/1:0,2:2:6.02:134,6,0	./.	1/1:0,2:2:6.02:134,6,0	1/1:0,9:9:27.09:613,27,0	1/1:0,3:3:9.03:199,9,0	1/1:0,2:2:6.02:134,6,0	1/1:0,2:2:6.02:134,6,0	1/1:0,3:3:9.03:201,9,0	1/1:0,4:4:12.04:268,12,0	1/1:0,3:3:9.03:202,9,0	1/1:0,6:6:18.06:406,18,0	./.	1/1:1,6:6:18.06:412,18,0	1/1:0,5:5:15.05:336,15,0	1/1:0,1:1:3.01:67,3,0	1/1:0,1:1:3.01:67,3,0	1/1:0,1:1:3.01:67,3,0	./.	1/1:0,7:7:21.07:471,21,0	1/1:0,16:16:48.16:1092,48,0	1/1:0,5:5:15.05:339,15,0	1/1:0,5:5:15.05:340,15,0
chr10	84726788	.	A	AGT	2819.54	PASS	AB=0.751;AC=12;AF=0.222;AN=54;BaseQRankSum=-5.782;DP=643;FS=5.677;HRun=0;HaplotypeScore=132.4418;InbreedingCoeff=0.6506;MQ=57.91;MQ0=14;MQRankSum=1.187;QD=18.43;ReadPosRankSum=0.763;VQSLOD=3.8667;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:8,6:13:27.07:396,27,0	0/0:46,0:16:7.40:0,7,73	0/0:38,0:13:9.74:0,10,92	0/0:27,0:27:54.16:0,54,633	0/0:24,0:24:45.12:0,45,517	0/0:25,0:28:59.66:0,60,637	0/0:25,0:25:18.05:0,18,210	0/1:10,2:13:64.44:64,0,230	1/1:17,19:34:69.23:1068,69,0	0/1:14,19:32:99:341,0,105	0/0:29,0:29:51.08:0,51,567	0/0:25,0:25:60.17:0,60,694	0/0:22,0:22:51.15:0,51,596	0/0:29,1:30:12.98:0,13,608	1/1:9,10:19:33.11:518,33,0	1/1:7,14:22:9.96:592,10,0	0/0:19,0:19:44.42:0,44,513	0/0:17,0:16:21.06:0,21,250	0/0:19,0:20:6.02:0,6,70	1/1:16,0:16:0.47:1,0,0	0/0:14,0:14:6.02:0,6,70	0/0:13,0:13:24.05:0,24,269	0/0:31,0:31:54.14:0,54,621	0/0:14,0:16:32.20:0,32,318	0/0:19,0:18:23.81:0,24,258	0/0:18,0:19:12.03:0,12,141	0/0:11,0:11:24.07:0,24,281
chr10	84726821	.	GTA	G	664.72	PASS	AB=0.805;AC=7;AF=0.135;AN=52;BaseQRankSum=8.799;DP=691;FS=9.820;HRun=0;HaplotypeScore=136.4337;InbreedingCoeff=0.0539;MQ=53.22;MQ0=31;MQRankSum=-5.377;QD=4.65;ReadPosRankSum=0.058;VQSLOD=1.8852;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,2:22:5.98:0,6,47	0/0:11,0:11:30.03:0,30,487	0/1:62,1:13:15.42:15,0,430	0/0:73,0:18:17.94:0,18,373	0/0:27,0:26:72.20:0,72,1220	0/0:22,0:22:57.18:0,57,1012	0/0:34,0:34:81.23:0,81,1370	0/0:10,0:10:17.84:0,18,151	0/0:17,0:17:45.15:0,45,813	0/0:36,0:33:66.04:0,66,1502	0/0:18,0:17:42.13:0,42,717	0/0:27,0:27:72.12:0,72,1184	0/0:29,0:29:66.19:0,66,1260	0/0:26,0:26:66.18:0,66,1145	0/0:28,0:28:75.21:0,75,1273	0/0:21,0:21:41.98:0,42,673	0/0:21,0:21:48.16:0,48,867	0/0:26,0:26:56.10:0,56,1097	0/1:7,3:8:35.74:89,0,36	./.	0/1:11,0:11:0:0,0,0	./.	0/0:20,0:19:51.16:0,51,882	0/0:32,0:32:87.19:0,87,1521	0/1:19,0:19:11.53:12,0,475	0/1:10,7:17:94.79:237,0,95	0/1:5,8:13:17.08:139,0,17	0/1:2,8:10:2.41:293,0,2
chr10	84726828	.	AGT	A	983.10	PASS	AB=0.698;AC=13;AF=0.232;AN=56;BaseQRankSum=6.738;DP=683;FS=5.987;HRun=0;HaplotypeScore=130.9434;InbreedingCoeff=0.4705;MQ=55.24;MQ0=27;MQRankSum=-5.044;QD=7.18;ReadPosRankSum=-3.916;VQSLOD=1.7416;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:6.02:78,6,0	0/0:11,0:11:27.09:0,27,459	0/0:60,1:15:24.82:0,25,304	0/0:81,1:22:21.93:0,22,357	0/0:28,0:28:72.22:0,72,1156	0/0:21,0:21:51.16:0,51,841	0/0:32,0:32:69.21:0,69,1128	1/1:1,10:11:30.02:342,30,0	0/0:16,0:16:39.13:0,39,663	0/0:31,0:30:69.20:0,69,1099	0/0:16,0:16:30.10:0,30,510	0/0:27,0:27:75.22:0,75,1221	0/0:29,0:29:69.20:0,69,1096	0/0:27,0:27:59.98:0,60,1012	0/0:31,0:31:78.25:0,78,1296	0/0:18,0:18:36.01:0,36,603	0/0:19,0:19:37.45:0,37,684	0/0:26,0:26:63.19:0,63,1030	0/1:5,4:8:32.10:116,0,32	1/1:8,15:23:3:26,3,0	0/1:2,9:11:0:0,0,0	1/1:8,11:19:3.01:39,3,0	0/0:21,0:20:51.16:0,51,834	0/0:31,1:32:51.32:0,51,1437	0/0:18,0:18:30.19:0,30,610	0/1:8,8:16:26.40:321,0,26	0/1:10,5:15:8.05:147,0,8	0/1:8,2:10:43.12:68,0,43
chr10	84726839	.	GAC	G	340.16	PASS	AB=0.867;AC=7;AF=0.125;AN=56;BaseQRankSum=8.788;DP=676;FS=6.227;HRun=0;HaplotypeScore=135.3240;InbreedingCoeff=0.3184;MQ=54.42;MQ0=20;MQRankSum=-7.360;QD=4.36;ReadPosRankSum=-1.228;VQSLOD=2.3854;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:4.59:0,5,15	0/0:10,0:10:30.10:0,30,569	0/0:49,2:13:28.25:0,28,396	0/0:64,1:21:33.34:0,33,582	0/0:28,0:28:72.23:0,72,1372	0/0:26,0:25:65.97:0,66,1265	0/0:32,0:32:81.27:0,81,1496	0/0:14,0:13:25.88:0,26,216	0/0:17,0:17:45.15:0,45,863	0/0:25,0:24:72.24:0,72,1359	0/0:17,0:17:36.12:0,36,706	0/0:26,0:26:75.26:0,75,1475	0/0:26,0:26:73.39:0,73,1256	0/0:24,1:25:53.43:0,53,1199	0/0:33,0:33:90.30:0,90,1734	0/0:16,0:16:32.98:0,33,634	0/0:16,1:17:1.32:0,1,738	0/0:21,0:21:60.21:0,60,1208	0/1:13,0:14:50.56:51,0,252	0/0:25,0:25:12.01:0,12,153	0/0:17,0:17:2.78:0,3,47	1/1:16,1:18:2.37:8,2,0	0/0:22,0:21:57.20:0,57,1118	0/0:39,0:39:99:0,114,2077	0/0:20,2:22:10.67:0,11,945	0/1:16,6:22:99:181,0,210	0/1:13,2:15:36.07:36,0,72	1/1:6,3:9:16.96:190,17,0
chr10	84726862	.	A	AGT	4580.57	PASS	AB=0.723;AC=27;AF=0.482;AN=56;BaseQRankSum=5.489;DP=691;FS=4.319;HRun=0;HaplotypeScore=127.4912;InbreedingCoeff=0.7419;MQ=55.52;MQ0=21;MQRankSum=-2.284;QD=13.39;ReadPosRankSum=-2.356;VQSLOD=4.3664;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:10.58:0,11,114	1/1:3,4:7:15.05:236,15,0	0/0:47,0:11:20.07:0,20,170	0/1:64,0:24:1.42:1,0,135	0/0:25,0:26:63:0,63,720	0/0:20,0:19:42.57:0,43,492	1/1:29,0:29:54.11:541,54,0	1/1:17,8:22:37.28:467,37,0	0/0:18,0:19:44.97:0,45,527	1/1:10,19:28:26.13:843,26,0	0/1:7,10:17:18.60:225,0,19	0/0:27,0:27:69.21:0,69,835	0/0:23,0:23:48.14:0,48,573	0/0:24,0:24:48.01:0,48,560	0/0:31,0:31:72.21:0,72,867	1/1:5,13:18:24.45:391,24,0	1/1:8,5:14:1.62:240,2,0	0/0:26,0:26:66.18:0,66,779	1/1:13,4:15:21.02:290,21,0	1/1:4,22:26:10.79:298,11,0	1/1:14,13:23:5.96:75,6,0	1/1:4,17:22:8.16:77,8,0	0/0:28,0:27:63.19:0,63,769	0/0:37,0:37:83.83:0,84,983	0/0:20,0:21:48.14:0,48,575	1/1:10,0:27:61.88:492,62,0	0/1:2,12:14:8.12:360,0,8	1/1:3,0:5:5.96:45,6,0
chr10	84726877	.	G	GTA	2472.91	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=7.623;DP=699;FS=3.019;HRun=0;HaplotypeScore=141.5807;InbreedingCoeff=0.3727;MQ=54.64;MQ0=26;MQRankSum=-1.207;QD=8.86;ReadPosRankSum=0.925;VQSLOD=3.6665;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:13.69:0,14,141	1/1:7,0:7:16.73:121,17,0	0/0:62,0:12:29.45:0,29,288	0/0:61,0:21:19.12:0,19,161	0/0:28,0:28:69.14:0,69,888	0/0:20,0:19:47.07:0,47,640	1/1:2,29:32:57.18:1007,57,0	0/1:26,0:23:99:158,0,158	0/0:19,0:19:54.11:0,54,686	0/1:24,0:24:53.86:334,0,54	0/1:17,0:17:23.33:108,0,23	0/0:26,0:26:75.22:0,75,1026	0/0:18,0:18:51.13:0,51,686	0/0:21,0:21:48.12:0,48,661	0/0:29,0:29:78.19:0,78,1052	1/1:16,0:16:27.26:211,27,0	0/1:13,0:13:22.51:120,0,23	0/0:28,0:28:75.17:0,75,991	0/1:17,0:14:98.70:120,0,99	1/1:27,0:27:9.53:150,10,0	1/1:27,0:22:1.24:22,1,0	1/1:22,0:22:8.60:65,9,0	0/0:29,0:28:71.92:0,72,960	0/0:39,0:39:99:0,102,1300	0/0:18,0:19:47.99:0,48,656	0/1:26,0:25:50.18:50,0,61	0/1:21,0:21:48.80:186,0,49	1/1:4,0:4:2.51:8,3,0
chr10	84726908	.	A	AGTGT	3233.06	PASS	AB=0.845;AC=24;AF=0.429;AN=56;BaseQRankSum=8.715;DP=609;FS=2.969;HRun=0;HaplotypeScore=163.9192;InbreedingCoeff=0.7504;MQ=56.03;MQ0=21;MQRankSum=-8.624;QD=13.30;ReadPosRankSum=-4.323;VQSLOD=2.7955;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,4:15:4.01:32,0,4	0/1:7,0:7:0:0,0,0	0/0:47,0:13:22.62:0,23,279	0/0:56,0:20:23.33:0,23,324	0/0:26,0:26:38.51:0,39,656	0/0:23,0:22:34.54:0,35,547	0/0:29,0:30:35.09:0,35,481	1/1:28,0:24:33.06:518,33,0	0/0:14,0:14:33.11:0,33,556	1/1:22,0:21:41.85:505,42,0	1/1:15,0:15:11.19:103,11,0	0/0:17,0:17:33.11:0,33,550	0/0:14,0:14:17.55:0,18,507	0/0:16,0:16:24.02:0,24,351	0/0:25,0:25:54.12:0,54,873	1/1:17,0:17:11.69:96,12,0	1/1:10,0:10:13.63:182,14,0	0/0:23,0:21:48.16:0,48,813	1/1:9,1:9:12:181,12,0	1/1:16,3:21:12.61:264,13,0	0/1:20,4:21:14.25:39,0,14	0/1:15,9:24:8.42:54,0,8	0/0:21,0:21:45.11:0,45,720	0/0:36,0:36:78.37:0,78,1267	0/0:18,0:17:32.95:0,33,488	1/1:16,8:23:36.11:726,36,0	1/1:10,9:19:29.21:621,29,0	1/1:2,1:3:6.02:121,6,0
chr10	84726922	.	T	TGTGTGTGA	4801.78	PASS	AB=0.905;AC=26;AF=0.464;AN=56;BaseQRankSum=8.221;DP=587;FS=5.586;HRun=0;HaplotypeScore=184.6744;InbreedingCoeff=0.7750;MQ=52.76;MQ0=24;MQRankSum=-9.721;QD=21.93;ReadPosRankSum=-4.407;VQSLOD=3.0596;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:11:3.48:48,3,0	1/1:5,1:6:1.87:23,2,0	0/0:54,0:11:22.87:0,23,432	0/0:69,0:16:36.25:0,36,596	0/0:24,0:24:39.96:0,40,1101	0/0:20,0:19:30.47:0,30,874	0/0:26,0:25:44.90:0,45,895	1/1:24,0:20:29.34:491,29,0	0/0:13,0:13:33.08:0,33,938	1/1:18,4:21:37.98:1145,38,0	1/1:12,4:17:14.25:176,14,0	0/0:16,0:16:34.53:0,35,936	0/0:18,0:18:29.39:0,29,876	0/0:14,0:14:29.88:0,30,609	0/0:21,0:21:57.13:0,57,1425	0/1:13,4:17:2.74:268,0,3	1/1:6,6:12:23.57:527,24,0	0/0:22,0:19:50.96:0,51,1371	1/1:9,0:7:15.73:180,16,0	1/1:17,0:17:20.95:282,21,0	0/1:21,0:19:18.94:19,0,34	1/1:20,0:19:0.30:52,0,0	0/0:22,0:22:51.32:0,51,1216	0/0:35,0:35:90.23:0,90,2200	0/0:13,0:12:33:0,33,724	1/1:22,0:21:46.04:845,46,0	1/1:17,0:17:34.47:630,34,0	1/1:2,0:2:6.02:116,6,0
chr10	84726925	.	G	GAGA	2672.69	PASS	AB=0.638;AC=14;AF=0.250;AN=56;BaseQRankSum=7.231;DP=595;FS=0.480;HRun=0;HaplotypeScore=157.1195;InbreedingCoeff=0.5439;MQ=52.56;MQ0=27;MQRankSum=-9.351;QD=18.06;ReadPosRankSum=-5.676;VQSLOD=1.8624;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,4:11:12.09:94,12,0	0/0:5,0:5:4.30:0,4,49	0/0:60,0:11:25.89:0,26,348	0/0:66,0:16:36.03:0,36,519	0/0:23,0:23:42:0,42,685	0/0:18,0:17:33.78:0,34,525	0/0:25,0:24:39.12:0,39,620	0/1:14,11:24:22.28:752,0,22	0/0:14,0:14:32.93:0,33,537	0/0:23,0:22:43.44:0,43,377	0/0:17,0:16:5.62:0,6,42	0/0:17,0:17:41.49:0,41,604	0/0:18,0:18:39.13:0,39,610	0/0:13,0:13:26.99:0,27,433	0/0:21,0:21:50.90:0,51,797	0/0:17,0:17:0.63:0,1,131	0/0:15,0:15:16.28:0,16,100	0/0:19,0:16:51.17:0,51,844	0/1:5,1:7:11.33:133,0,11	0/1:3,9:13:42.03:189,0,42	0/1:8,12:22:4.18:91,0,4	1/1:6,12:19:26.66:147,27,0	0/0:24,0:24:51.63:0,52,809	0/0:35,0:35:87.48:0,87,1403	0/0:14,0:12:27.38:0,27,416	1/1:7,14:20:12.34:760,12,0	1/1:6,8:18:12.34:553,12,0	1/1:0,4:4:6.02:127,6,0
chr10	84726942	.	AGT	A	145.92	PASS	AB=1.000;AC=16;AF=0.364;AN=44;BaseQRankSum=1.794;DP=525;FS=0.000;HRun=0;HaplotypeScore=129.7350;InbreedingCoeff=0.2070;MQ=43.93;MQ0=32;MQRankSum=0.606;QD=0.73;ReadPosRankSum=0.935;VQSLOD=2.1728;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:9:0.45:0,0,2	./.	./.	./.	0/1:23,0:22:0:1,0,0	0/1:16,0:16:15.20:15,0,18	0/0:22,0:21:0:0,0,0	./.	./.	0/1:19,0:17:6.92:7,0,16	0/1:10,0:9:0.02:0,0,0	0/1:14,0:13:18.92:25,0,19	0/0:17,0:17:1.44:0,1,40	1/1:16,0:16:10.88:78,11,0	0/0:21,0:20:10.72:0,11,132	1/1:13,0:13:5.17:27,5,0	0/0:17,0:16:3.28:0,3,21	0/1:18,0:14:10.15:16,0,10	0/0:11,0:9:5.19:0,5,27	0/0:12,0:12:0.47:0,0,1	0/0:22,0:21:0.47:0,0,1	0/0:15,0:16:2.67:0,3,11	1/1:18,8:26:3.47:31,3,0	1/1:29,0:28:7.76:51,8,0	./.	0/0:18,0:18:3.73:0,4,30	1/1:14,0:13:2.84:14,3,0	0/0:7,0:7:4.98:0,5,24
chr10	84728351	.	CAGGACTCTGAGCG	C	984.25	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.567;DP=185;FS=0.000;HRun=0;HaplotypeScore=67.9768;InbreedingCoeff=0.4903;MQ=91.96;MQ0=0;MQRankSum=-4.177;QD=98.43;ReadPosRankSum=0.638;VQSLOD=2.8626;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:27.09:1078,27,0	0/0:2,0:2:3.01:0,3,204	0/0:10,0:10:30.10:0,30,1653	0/0:10,0:9:24.07:0,24,1415	0/0:4,0:4:12.04:0,12,815	0/0:2,0:2:6.02:0,6,407	0/0:9,0:9:24.08:0,24,1496	0/0:15,0:15:45.15:0,45,2809	0/0:5,0:5:15.05:0,15,1016	0/0:12,0:12:36.12:0,36,2413	0/0:1,0:1:3.01:0,3,204	0/0:7,0:7:21.07:0,21,1416	0/0:7,0:7:21.07:0,21,1409	0/0:7,0:7:21.07:0,21,1416	0/0:3,0:3:9.03:0,9,612	0/0:4,0:4:12.04:0,12,814	0/0:16,0:16:48.16:0,48,3259	0/0:14,0:14:39.13:0,39,2531	0/0:5,0:5:15.05:0,15,757	0/0:3,0:3:9.03:0,9,565	0/0:8,0:8:18.06:0,18,1223	0/0:6,0:6:18.06:0,18,1220	0/0:4,0:4:12.04:0,12,795	0/0:6,0:6:15.05:0,15,1019	0/0:3,0:3:9.03:0,9,594	0/0:6,0:6:18.06:0,18,1222	0/0:4,0:4:12.04:0,12,814	0/0:2,0:2:6.02:0,6,407
chr10	84730138	.	TA	T	714.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.330;DP=733;FS=1.762;HRun=2;HaplotypeScore=73.6693;InbreedingCoeff=0.9990;MQ=86.81;MQ0=0;MQRankSum=-0.489;QD=29.75;ReadPosRankSum=0.323;VQSLOD=3.2664;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,187,2743	0/0:10,0:10:27.09:0,27,404	0/0:24,1:25:57.70:0,58,914	0/0:29,0:29:75.19:0,75,1052	0/0:32,0:32:96.31:0,96,1419	0/0:25,0:25:75.23:0,75,1078	1/1:0,24:24:63.20:809,63,0	0/0:30,0:30:81.26:0,81,1180	0/0:30,0:30:90.30:0,90,1347	0/0:27,0:27:81.27:0,81,1197	0/0:16,0:16:45.15:0,45,674	0/0:25,0:25:75.25:0,75,1124	0/0:21,0:21:63.20:0,63,923	0/0:30,0:30:90.27:0,90,1306	0/0:39,0:39:99:0,117,1697	0/0:20,0:20:57.18:0,57,834	0/0:18,0:18:54.18:0,54,806	0/0:20,0:20:60.20:0,60,899	0/0:23,0:23:69.23:0,69,1033	0/0:26,0:26:69.22:0,69,1014	0/0:47,0:47:99:0,141,2094	0/0:27,0:27:78.24:0,78,1131	0/0:17,0:17:45.11:0,45,648	0/0:20,0:20:60.16:0,60,874	0/0:20,0:20:60.18:0,60,877	0/0:25,0:25:75.24:0,75,1090	0/0:21,0:21:63.21:0,63,931	0/0:23,0:23:69.23:0,69,1034
chr10	84730456	.	G	GT	2869.58	PASS	AB=0.746;AC=25;AF=0.446;AN=56;BaseQRankSum=-1.014;DP=475;FS=21.900;HRun=11;HaplotypeScore=48.3228;InbreedingCoeff=0.5739;MQ=64.83;MQ0=13;MQRankSum=0.803;QD=11.66;ReadPosRankSum=-0.645;VQSLOD=1.0175;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:16.71:0,17,347	1/1:1,0:8:19.64:95,20,0	0/0:44,0:16:32.19:0,32,218	0/0:36,0:12:8.14:0,8,42	0/0:16,0:15:37.87:0,38,283	0/0:7,0:7:14.91:0,15,113	1/1:1,8:9:15.03:152,15,0	1/1:10,13:21:18.80:356,19,0	0/0:8,0:9:22.95:0,23,168	1/1:4,0:17:38:197,38,0	1/1:6,0:24:35.37:176,35,0	0/0:14,0:12:31.68:0,32,223	0/0:13,0:13:28.44:0,28,212	0/1:6,0:6:0.76:1,0,95	0/1:10,1:11:3.55:4,0,157	1/1:4,2:14:14.53:104,15,0	1/1:4,4:28:57.48:350,57,0	0/0:28,0:30:65.99:0,66,488	0/1:4,13:16:27.17:253,0,27	0/1:6,8:14:2.13:161,0,2	0/1:7,3:10:10.13:65,0,10	0/1:3,5:8:5.20:132,0,5	0/0:8,0:8:6.74:0,7,125	0/0:14,0:14:38.84:0,39,301	0/0:13,0:13:32.77:0,33,246	1/1:6,16:21:46.40:454,46,0	0/1:11,7:18:10.39:268,0,10	1/1:1,11:12:30.06:305,30,0
chr10	84730542	.	A	ACC	1369.82	PASS	AB=0.778;AC=19;AF=0.339;AN=56;BaseQRankSum=0.712;DP=368;FS=5.164;HRun=8;HaplotypeScore=48.6965;InbreedingCoeff=0.7776;MQ=69.83;MQ0=8;MQRankSum=-0.723;QD=12.92;ReadPosRankSum=-4.020;VQSLOD=-0.6202;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:10:3.54:45,4,0	0/0:6,0:6:12.03:0,12,133	0/0:41,0:13:3.41:0,3,173	0/0:24,0:11:10.28:0,10,113	0/0:10,0:10:18.04:0,18,200	0/0:16,0:15:30.03:0,30,320	1/1:5,0:10:15.04:175,15,0	1/1:16,3:17:18.92:248,19,0	0/0:11,0:11:33.09:0,33,367	0/0:13,0:13:30.04:0,30,317	0/0:8,0:8:21.05:0,21,232	0/0:16,0:15:36.06:0,36,378	0/0:13,0:13:30.07:0,30,328	0/0:8,0:8:18.01:0,18,191	0/0:11,0:11:30.04:0,30,321	0/0:8,0:8:15.03:0,15,167	0/0:33,0:31:81.10:0,81,865	0/0:17,0:17:39.09:0,39,433	1/1:8,3:12:17.55:241,18,0	1/1:4,5:9:18.06:266,18,0	1/1:0,1:7:10.50:73,10,0	1/1:1,0:4:2.50:9,2,0	0/0:6,0:6:18.03:0,18,190	0/0:12,0:12:27.01:0,27,279	0/0:7,0:7:12.02:0,12,134	0/1:10,4:14:92.84:93,0,111	1/1:1,12:13:24.55:382,25,0	1/1:4,0:5:3.01:32,3,0
chr10	84730711	.	T	TC	1608.48	PASS	AB=0.964;AC=26;AF=0.464;AN=56;BaseQRankSum=-4.073;DP=354;FS=28.996;HRun=0;HaplotypeScore=48.1512;InbreedingCoeff=0.5316;MQ=68.21;MQ0=33;MQRankSum=2.422;QD=8.84;ReadPosRankSum=2.390;VQSLOD=1.8343;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:29:32.10:258,32,0	0/1:5,0:5:29.86:46,0,30	0/0:26,0:16:3.45:0,3,138	0/0:32,0:18:25.70:0,26,273	0/0:9,0:7:20.88:0,21,181	0/0:12,0:11:23.45:0,23,194	0/1:7,1:5:4.36:58,0,4	1/1:13,16:25:56.85:425,57,0	0/0:7,0:7:14.91:0,15,119	1/1:5,0:5:8.88:79,9,0	1/1:7,0:6:1.18:9,1,0	0/0:10,0:9:17.47:0,17,122	0/0:8,0:7:20.67:0,21,158	0/0:9,0:7:15.03:0,15,159	0/0:8,0:8:14.99:0,15,152	1/1:2,0:2:0.47:1,0,0	0/1:29,1:28:15.70:257,0,16	0/0:17,0:15:21.10:0,21,224	1/1:15,0:14:36.91:253,37,0	1/1:3,0:2:1.55:4,2,0	1/1:12,0:12:11.37:87,11,0	1/1:4,0:2:2.99:24,3,0	0/0:3,0:3:6.47:0,6,54	0/0:23,0:21:3.63:0,4,267	0/0:8,0:7:15.18:0,15,111	1/1:15,0:14:34.66:246,35,0	1/1:4,0:2:4.81:28,5,0	0/1:10,0:2:12.47:17,0,12
chr10	84731953	.	C	CA	2112.98	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=-8.270;DP=276;FS=1.209;HRun=6;HaplotypeScore=32.9616;InbreedingCoeff=0.7353;MQ=74.52;MQ0=7;MQRankSum=-1.457;QD=21.56;ReadPosRankSum=-5.128;VQSLOD=1.2547;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:54.03:0,54,541	0/0:3,0:3:6.01:0,6,61	0/1:24,0:12:2.07:2,0,110	0/0:21,0:14:26.68:0,27,245	0/0:6,0:6:18.04:0,18,184	0/0:5,0:5:15.03:0,15,153	0/0:9,0:8:17.99:0,18,163	1/1:2,35:36:96.73:1173,97,0	0/0:1,0:1:3.01:0,3,30	0/0:4,0:4:12.03:0,12,122	0/0:6,0:6:15.03:0,15,153	0/0:5,0:5:15.03:0,15,153	0/0:5,0:5:12.03:0,12,122	0/0:4,0:4:12.03:0,12,122	0/0:5,0:5:15.03:0,15,153	0/0:1,0:1:3.01:0,3,31	0/0:26,0:26:66.09:0,66,656	0/0:17,0:16:24.91:0,25,298	1/1:3,14:16:39.09:462,39,0	1/1:1,3:4:12.04:150,12,0	1/1:2,4:6:12.04:151,12,0	./.	0/0:1,0:1:3.01:0,3,31	0/0:8,0:8:18.03:0,18,178	0/0:4,0:4:9:0,9,83	0/0:3,0:3:9.02:0,9,92	1/1:1,9:10:27.09:340,27,0	0/0:21,0:21:63.14:0,63,643
chr10	84732025	.	GAT	G	1567.30	PASS	AB=0.786;AC=15;AF=0.300;AN=50;BaseQRankSum=4.383;DP=276;FS=0.000;HRun=0;HaplotypeScore=36.4835;InbreedingCoeff=0.4348;MQ=65.26;MQ0=15;MQRankSum=0.400;QD=21.18;ReadPosRankSum=-1.254;VQSLOD=3.0415;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:36.11:446,36,0	0/0:1,0:3:6:0,6,56	0/0:35,0:14:2.04:0,2,7	0/0:64,0:13:2.96:0,3,28	0/0:4,0:4:12.04:0,12,197	0/1:5,1:6:22.15:22,0,182	./.	1/1:10,20:30:60.18:732,60,0	0/0:2,0:2:6.02:0,6,98	0/0:3,0:3:5.18:0,5,36	0/0:1,0:1:3.01:0,3,32	./.	0/1:3,1:5:25.06:25,0,113	0/0:2,0:2:6.02:0,6,98	0/0:2,0:2:6.02:0,6,98	0/0:3,0:3:3:0,3,26	0/0:6,0:21:36.02:0,36,318	0/0:24,0:24:72.25:0,72,1168	1/1:2,6:8:18.05:213,18,0	1/1:0,4:4:12.04:149,12,0	1/1:0,1:1:3.01:37,3,0	1/1:1,0:1:3.01:37,3,0	0/0:0,0:1:0:0,0,0	./.	0/0:10,0:10:27.09:0,27,443	0/0:3,0:3:9.03:0,9,148	0/1:2,2:4:10.50:65,0,10	0/0:19,0:19:48.16:0,48,787
chr10	84734836	.	C	CGAGA	2074.45	PASS	AB=0.972;AC=41;AF=0.932;AN=44;DP=359;FS=0.000;HRun=0;HaplotypeScore=90.0786;InbreedingCoeff=0.1553;MQ=33.41;MQ0=48;QD=6.59;VQSLOD=1.8512;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:23:15.05:265,15,0	1/1:3,0:3:3.01:43,3,0	./.	./.	./.	1/1:14,0:10:9.03:141,9,0	1/1:23,5:26:3.48:57,3,0	1/1:18,0:11:3.01:55,3,0	1/1:12,0:10:8.59:174,9,0	1/1:20,0:17:15.52:289,16,0	1/1:11,0:11:2.99:23,3,0	1/1:7,0:6:2.70:45,3,0	1/1:4,0:4:3.01:52,3,0	1/1:9,0:8:3.01:44,3,0	./.	1/1:10,0:12:6.02:133,6,0	1/1:4,0:3:3.01:44,3,0	1/1:16,0:15:12.31:163,12,0	1/1:21,0:17:13.29:208,13,0	1/1:9,0:9:3.48:53,3,0	0/1:18,0:12:0:0,0,0	1/1:11,0:16:2.04:6,2,0	0/1:15,0:13:0:0,0,0	0/1:10,0:9:0.14:0,0,0	./.	1/1:21,0:18:25.28:321,25,0	1/1:7,0:6:3.01:30,3,0	./.
chr10	84735106	.	TA	T	1162.16	PASS	AB=0.864;AC=16;AF=0.286;AN=56;BaseQRankSum=3.645;DP=422;FS=10.234;HRun=14;HaplotypeScore=58.4021;InbreedingCoeff=0.1742;MQ=58.42;MQ0=5;MQRankSum=0.335;QD=5.67;ReadPosRankSum=-0.247;VQSLOD=1.1977;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:33:47.64:305,48,0	0/0:1,0:1:3:0,3,28	0/1:18,0:7:2.97:3,0,19	0/1:13,0:7:7.67:8,0,41	0/0:11,0:11:24:0,24,212	0/0:19,2:19:3.86:0,4,315	1/1:3,13:15:38.46:260,38,0	0/0:31,1:31:17.57:0,18,232	0/1:6,1:10:6.67:7,0,103	0/0:17,0:17:19.40:0,19,252	0/1:11,5:16:22.87:23,0,223	0/0:10,1:11:0.51:0,1,117	0/1:6,1:7:8.63:9,0,61	0/0:11,0:12:17.18:0,17,186	0/1:8,3:10:17.17:17,0,131	0/0:12,0:13:6.35:0,6,180	0/0:22,2:24:35.76:0,36,436	0/1:12,6:18:69.93:70,0,121	0/1:25,3:28:65.30:65,0,193	0/0:8,1:9:0.02:0,0,85	0/0:5,0:5:14.51:0,15,80	0/0:7,0:7:4.02:0,4,27	0/0:8,1:10:2.08:0,2,119	0/0:7,0:7:11.93:0,12,100	0/0:12,0:12:9.62:0,10,190	1/1:2,19:23:35.17:356,35,0	0/0:24,1:25:4.94:0,5,267	1/1:0,11:11:29.76:205,30,0
chr10	84735244	.	GACCTCTC	G	2422.57	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.446;DP=548;FS=4.522;HRun=0;HaplotypeScore=122.9842;InbreedingCoeff=0.9950;MQ=75.63;MQ0=0;MQRankSum=-8.612;QD=62.12;ReadPosRankSum=-0.433;VQSLOD=3.7386;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:20:51.18:1386,51,0	0/0:9,0:9:27.09:0,27,1133	0/0:17,0:17:48.16:0,48,1681	0/0:14,0:14:36.10:0,36,1223	0/0:30,0:30:84.29:0,84,3392	0/0:30,0:30:90.29:0,90,3579	1/1:0,16:16:42.14:1158,42,0	0/0:38,0:38:99:0,114,4567	0/0:20,0:20:60.21:0,60,2450	0/0:27,0:27:81.28:0,81,3215	0/0:18,0:18:54.17:0,54,2162	0/0:12,0:12:36.12:0,36,1494	0/0:12,0:12:36.12:0,36,1469	0/0:14,0:14:42.14:0,42,1753	0/0:14,0:14:42.14:0,42,1739	0/0:14,0:14:39.13:0,39,1557	0/0:30,0:30:90.31:0,90,3580	0/0:19,0:19:57.20:0,57,2286	0/0:28,0:28:84.27:0,84,3296	0/0:16,0:16:45.14:0,45,1773	0/0:24,0:24:72.25:0,72,3022	0/0:18,0:18:51.18:0,51,2140	0/0:13,0:13:39.13:0,39,1588	0/0:21,0:21:63.22:0,63,2616	0/0:14,0:14:39.13:0,39,1570	0/0:30,0:30:90.31:0,90,3574	0/0:20,0:20:60.20:0,60,2300	0/0:7,0:7:18.06:0,18,755
chr10	84735322	.	G	GTTTAT	5041.61	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.504;DP=619;FS=3.804;HRun=0;HaplotypeScore=108.8476;InbreedingCoeff=0.9898;MQ=70.50;MQ0=2;MQRankSum=-3.125;QD=52.52;ReadPosRankSum=1.259;VQSLOD=5.1577;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,32:39:84.29:2356,84,0	0/0:9,0:9:24.08:0,24,449	0/0:24,0:21:19.23:0,19,306	0/0:10,0:9:15.05:0,15,280	0/0:22,0:22:35.67:0,36,643	0/0:26,0:26:54.19:0,54,1016	1/1:8,7:15:27.09:683,27,0	0/0:38,0:38:87.28:0,87,1561	0/0:26,0:26:60.14:0,60,1039	0/0:33,0:32:80.99:0,81,1406	0/0:15,0:15:27.08:0,27,480	0/0:23,0:23:60.19:0,60,1096	0/0:12,0:12:27.07:0,27,473	0/0:18,0:18:39.13:0,39,743	0/0:19,0:18:36.12:0,36,676	0/0:17,0:17:39.12:0,39,703	0/0:28,0:28:63.17:0,63,1122	0/0:21,0:21:54.15:0,54,983	0/0:37,0:37:54.16:0,54,964	0/0:20,0:20:51.17:0,51,956	0/0:18,0:18:30.10:0,30,571	0/0:15,0:15:30.10:0,30,527	0/0:20,0:20:48.14:0,48,838	0/0:24,0:24:60.17:0,60,1045	0/0:16,0:16:36.11:0,36,642	1/1:7,18:29:63.18:1482,63,0	0/0:32,0:32:81.27:0,81,1500	1/1:4,7:13:18.06:520,18,0
chr10	84735777	.	CTTTG	C	9524.11	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=13.503;DP=475;FS=0.000;HRun=0;HaplotypeScore=93.1970;InbreedingCoeff=0.9802;MQ=75.51;MQ0=0;MQRankSum=-6.404;QD=44.51;ReadPosRankSum=0.321;VQSLOD=5.2353;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:99:2016,108,0	1/1:0,7:7:21.07:376,21,0	0/0:14,0:14:33.11:0,33,806	0/0:17,0:17:5.40:0,5,718	0/0:14,0:14:33.11:0,33,879	0/0:32,0:31:87.28:0,87,2207	0/0:16,0:16:39.13:0,39,1027	1/1:8,25:33:75.23:1323,75,0	0/0:17,0:17:48.16:0,48,1280	1/1:2,10:12:30.10:553,30,0	1/1:4,12:16:27.09:504,27,0	0/0:15,0:15:39.13:0,39,1020	0/0:14,0:14:39.13:0,39,1040	0/0:16,0:16:42.14:0,42,1115	0/0:18,0:18:54.19:0,54,1385	0/0:19,0:19:57.20:0,57,1500	0/0:28,0:28:84.27:0,84,2180	0/0:7,0:7:18.06:0,18,474	1/1:3,15:18:45.15:832,45,0	1/1:1,14:15:39.09:692,39,0	1/1:5,23:28:63.22:1159,63,0	1/1:2,8:10:18.06:336,18,0	0/0:11,0:11:33.11:0,33,875	0/0:10,0:10:30.10:0,30,787	0/0:13,0:13:36.12:0,36,956	1/1:2,11:13:33.11:615,33,0	1/1:1,11:12:27.09:504,27,0	1/1:1,11:12:33.11:616,33,0
chr10	84736043	.	C	CTT	2848.42	PASS	AB=0.756;AC=28;AF=0.500;AN=56;BaseQRankSum=-0.822;DP=494;FS=0.000;HRun=15;HaplotypeScore=72.0102;InbreedingCoeff=0.5868;MQ=66.37;MQ0=3;MQRankSum=-0.569;QD=9.37;ReadPosRankSum=-4.623;VQSLOD=0.4795;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,23:38:22.19:409,22,0	1/1:4,0:4:6:61,6,0	0/1:19,0:11:20.45:20,0,36	0/0:18,0:11:6.62:0,7,45	0/0:21,0:23:16.65:0,17,117	0/0:19,0:21:43.34:0,43,290	1/1:8,9:19:20.43:237,20,0	0/1:21,2:29:4.65:300,0,5	0/0:13,0:15:16.87:0,17,118	1/1:6,1:14:26.97:256,27,0	1/1:6,2:19:37.08:325,37,0	0/0:12,0:16:22.79:0,23,153	0/0:11,0:13:8.11:0,8,95	0/0:13,0:13:11.47:0,11,95	0/0:14,0:18:28.86:0,29,201	1/1:4,11:19:21.48:182,21,0	1/1:4,2:20:22.22:203,22,0	0/1:10,0:14:8.95:9,0,83	0/1:6,2:14:0.41:163,0,0	0/1:5,4:14:22.80:141,0,23	1/1:2,11:13:14.96:158,15,0	1/1:6,1:11:12.40:110,12,0	0/0:10,0:13:21.96:0,22,163	0/0:20,0:21:29.26:0,29,276	0/0:13,0:18:17.02:0,17,127	1/1:7,2:16:25.15:219,25,0	0/1:5,2:17:7.62:86,0,8	1/1:7,0:20:19.27:176,19,0
chr10	84737618	.	C	CTT	2933.11	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=3.810;DP=519;FS=11.453;HRun=14;HaplotypeScore=98.9671;InbreedingCoeff=0.9140;MQ=56.14;MQ0=9;MQRankSum=-5.098;QD=12.27;ReadPosRankSum=-7.254;VQSLOD=-0.7213;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:12,16:32:19.76:434,20,0	1/1:9,2:13:14.35:105,14,0	0/0:15,0:9:7.53:0,8,57	0/1:8,0:7:0:0,0,0	0/0:29,0:30:35.11:0,35,321	0/0:20,0:20:18.85:0,19,281	0/0:18,0:17:20.74:0,21,172	1/1:15,0:22:34.70:276,35,0	0/0:14,0:13:14.73:0,15,124	1/1:14,1:17:17.53:118,18,0	1/1:7,5:11:20.41:229,20,0	0/0:17,0:17:23.57:0,24,185	0/0:11,0:12:17.65:0,18,143	0/0:8,0:9:3:0,3,78	0/0:20,0:22:23.15:0,23,228	1/1:9,7:16:25.80:279,26,0	1/1:9,9:19:32.16:313,32,0	0/0:28,0:29:55.15:0,55,439	1/1:15,4:21:26.94:247,27,0	1/1:11,2:19:41.88:405,42,0	1/1:7,0:10:6.44:50,6,0	1/1:16,0:19:35.74:280,36,0	0/0:20,0:21:23.39:0,23,187	0/0:16,0:16:17.40:0,17,137	0/0:16,0:18:23.52:0,24,187	0/0:19,0:19:23.67:0,24,221	1/1:10,1:26:46.70:416,47,0	0/0:16,0:16:35.87:0,36,297
chr10	84738012	.	G	GT	7355.05	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-9.379;DP=566;FS=13.124;HRun=7;HaplotypeScore=58.4247;InbreedingCoeff=0.9101;MQ=83.78;MQ0=2;MQRankSum=0.069;QD=22.70;ReadPosRankSum=2.065;VQSLOD=4.0659;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:89.58:90,0,124	1/1:1,10:11:30.09:362,30,0	0/0:50,0:33:31.10:0,31,409	0/0:28,0:18:19.63:0,20,217	0/0:20,0:20:47.93:0,48,433	1/1:1,13:14:33.10:398,33,0	1/1:2,19:21:48.15:580,48,0	1/1:5,15:20:47.62:428,48,0	0/0:21,0:21:47.97:0,48,443	1/1:5,9:14:30.02:299,30,0	1/1:2,8:11:29.94:308,30,0	0/0:18,0:18:45.03:0,45,420	0/0:10,0:10:30.02:0,30,279	0/0:17,0:17:50.78:0,51,462	0/0:17,0:17:51.05:0,51,481	1/1:1,21:22:54.17:652,54,0	1/1:2,29:31:60.18:724,60,0	0/0:20,0:20:60:0,60,555	1/1:3,19:22:57.07:605,57,0	1/1:1,17:18:27.34:429,27,0	1/1:1,22:23:36.11:435,36,0	1/1:3,12:16:26.83:259,27,0	0/0:15,0:15:32.98:0,33,303	0/0:25,0:25:65.92:0,66,585	1/1:2,16:18:36.11:428,36,0	1/1:1,18:20:57.13:644,57,0	1/1:2,24:26:31.18:643,31,0	1/1:0,3:3:6.02:72,6,0
chr10	84738019	.	T	TG	1708.77	PASS	AB=0.996;AC=24;AF=0.429;AN=56;BaseQRankSum=10.910;DP=600;FS=18.816;HRun=8;HaplotypeScore=84.9213;InbreedingCoeff=0.1319;MQ=82.34;MQ0=2;MQRankSum=-2.183;QD=4.26;ReadPosRankSum=6.029;VQSLOD=-0.2215;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,22:34:48.14:555,48,0	1/1:13,0:13:7.68:101,8,0	0/1:50,0:32:3.81:4,0,303	0/0:30,1:20:31.10:0,31,229	0/0:22,0:22:36.87:0,37,344	0/1:17,0:18:23.11:95,0,23	0/1:27,0:27:69.98:104,0,70	0/1:19,0:19:26.53:36,0,27	0/0:19,0:19:50.96:0,51,452	0/1:12,0:12:19.17:19,0,33	1/1:11,0:11:18.58:88,19,0	0/0:16,0:16:39.01:0,39,353	0/0:11,0:11:26.99:0,27,242	0/0:19,0:19:53.95:0,54,475	0/0:17,0:17:45.01:0,45,407	0/1:26,0:26:15.17:130,0,15	0/1:33,0:33:0.92:158,0,1	0/0:25,0:25:65.84:0,66,573	0/1:22,0:22:64.37:65,0,64	0/1:21,0:21:3.40:60,0,3	0/1:25,0:25:25.11:87,0,25	0/1:15,0:15:33.37:33,0,37	0/0:16,0:16:33.87:0,34,293	0/0:22,0:22:54:0,54,487	1/1:18,0:18:9.84:103,10,0	1/1:21,0:21:0.63:93,1,0	0/1:30,0:30:48.98:137,0,49	1/1:6,0:6:5.17:21,5,0
chr10	84739820	.	AG	A	5691.29	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.297;DP=656;FS=3.056;HRun=1;HaplotypeScore=79.5896;InbreedingCoeff=0.9998;MQ=75.82;MQ0=0;MQRankSum=-0.280;QD=39.80;ReadPosRankSum=0.704;VQSLOD=5.4685;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1918	0/0:14,0:14:42.14:0,42,653	0/0:35,0:30:90.30:0,90,1364	0/0:24,0:23:69.22:0,69,1015	0/0:32,0:32:96.33:0,96,1531	0/0:26,0:26:78.27:0,78,1238	0/0:12,0:12:32.24:0,32,526	1/1:0,25:25:75.22:1014,75,0	0/0:34,0:34:96.33:0,96,1521	0/0:31,0:31:87.29:0,87,1371	0/0:24,0:24:69.24:0,69,1103	0/0:22,0:22:63.18:0,63,960	0/0:19,0:19:57.19:0,57,903	0/0:12,0:12:36.12:0,36,576	0/0:26,0:26:78.25:0,78,1224	0/0:20,0:20:60.20:0,60,952	0/0:25,0:25:72.25:0,72,1142	0/0:15,0:15:42.14:0,42,671	1/1:0,20:20:54.16:736,54,0	1/1:0,23:23:63.21:881,63,0	1/1:0,26:26:75.25:1047,75,0	1/1:0,23:23:69.23:964,69,0	0/0:22,0:22:66.22:0,66,1047	0/0:22,0:22:66.22:0,66,1036	0/0:22,0:22:66.23:0,66,1055	0/0:25,0:25:75.24:0,75,1156	1/1:0,26:26:75.25:1049,75,0	0/0:10,0:10:30.10:0,30,479
chr10	84740190	.	CA	C	3022.98	PASS	AB=0.654;AC=33;AF=0.589;AN=56;BaseQRankSum=8.114;DP=447;FS=0.444;HRun=11;HaplotypeScore=54.3742;InbreedingCoeff=0.8615;MQ=59.11;MQ0=10;MQRankSum=-0.863;QD=10.76;ReadPosRankSum=-0.267;VQSLOD=2.5577;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,31:36:79.85:638,80,0	1/1:3,3:6:8.98:74,9,0	1/1:15,0:4:1.74:5,2,0	0/0:21,0:5:3.91:0,4,35	0/0:27,1:28:35.32:0,35,550	1/1:2,0:16:18.33:53,18,0	0/0:11,0:11:18.04:0,18,191	1/1:7,14:22:43.95:345,44,0	0/0:10,0:8:21.02:0,21,207	1/1:6,17:22:44.88:360,45,0	1/1:5,9:13:16.61:128,17,0	0/0:9,0:10:26.43:0,26,264	0/0:9,0:9:23.98:0,24,241	0/0:18,0:19:50.95:0,51,518	0/0:8,0:9:17.88:0,18,174	1/1:5,10:14:20.97:172,21,0	1/1:5,14:19:38.79:309,39,0	0/0:24,1:25:35.51:0,36,583	0/1:8,9:16:2.06:188,0,2	1/1:3,10:13:23.94:197,24,0	1/1:3,6:9:14.98:123,15,0	1/1:0,3:3:3:25,3,0	0/0:9,0:10:23.70:0,24,205	0/0:11,0:11:30.08:0,30,320	1/1:1,0:11:16.30:47,16,0	1/1:2,0:26:43.04:148,43,0	1/1:5,18:22:44.83:369,45,0	1/1:1,1:8:13.18:54,13,0
chr10	84740405	.	G	GGC	2154.77	PASS	AB=0.990;AC=25;AF=0.446;AN=56;BaseQRankSum=7.376;DP=490;FS=3.319;HRun=0;HaplotypeScore=87.0208;InbreedingCoeff=0.4559;MQ=53.35;MQ0=16;MQRankSum=0.914;QD=7.95;ReadPosRankSum=0.693;VQSLOD=3.3859;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:31:3.29:48,3,0	0/1:4,0:4:4.13:62,0,4	0/0:15,0:10:29.97:0,30,275	0/0:17,0:8:17.67:0,18,211	0/0:8,0:8:14.89:0,15,111	0/1:11,0:11:18.10:114,0,18	0/0:19,0:19:44.37:0,44,356	0/1:24,0:20:65.16:126,0,65	0/0:17,0:16:46.58:0,47,409	0/1:11,0:9:5.22:66,0,5	1/1:7,0:7:8.87:75,9,0	0/0:14,0:15:38.55:0,39,376	0/0:8,0:12:13.56:0,14,170	0/0:18,0:21:44.47:0,44,394	0/0:23,0:21:54.04:0,54,653	1/1:15,0:18:10.29:214,10,0	1/1:21,0:22:11.40:273,11,0	0/0:13,0:18:12:0,12,180	0/1:13,1:14:40.63:158,0,41	1/1:8,0:8:20.88:166,21,0	1/1:21,37:58:5.22:21,5,0	0/1:4,0:4:19.38:19,0,26	0/0:6,0:8:14.95:0,15,122	0/0:39,0:43:70.70:0,71,795	1/1:11,0:8:14.91:118,15,0	0/1:19,0:19:39.96:347,0,40	1/1:16,0:18:50.02:411,50,0	1/1:8,0:8:16.86:135,17,0
chr10	84740862	.	CTGTGTGTG	C	687.16	PASS	AB=0.950;AC=21;AF=0.477;AN=44;BaseQRankSum=2.725;DP=625;FS=1.378;HRun=0;HaplotypeScore=143.8331;InbreedingCoeff=0.5591;MQ=71.33;MQ0=19;MQRankSum=-0.619;QD=2.65;ReadPosRankSum=0.752;VQSLOD=2.3149;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:1.25:3,1,0	1/1:4,3:7:5.99:96,6,0	./.	./.	0/0:16,0:16:9.03:0,9,238	1/1:23,0:20:6.02:73,6,0	./.	0/0:24,0:23:1.25:0,1,3	0/0:16,0:22:9.90:0,10,138	0/1:28,6:34:17.05:107,0,17	1/1:7,0:7:2.98:21,3,0	0/0:23,0:23:21.07:0,21,395	0/0:17,0:17:30.07:0,30,607	0/0:21,0:20:12.01:0,12,153	0/0:19,0:22:18.49:0,18,331	1/1:13,4:18:6.02:129,6,0	1/1:30,0:24:18.02:295,18,0	0/0:29,0:32:18.06:0,18,488	1/1:15,0:16:3.01:56,3,0	1/1:5,0:10:3.01:47,3,0	1/1:52,0:49:0.47:1,0,0	./.	0/0:12,0:12:6.02:0,6,157	0/0:33,0:33:51.15:0,51,1093	0/1:16,0:16:0:0,0,0	0/1:20,0:20:0:0,0,0	./.	./.
chr10	84741637	.	GGGGGA	G	2009.16	PASS	AB=0.977;AC=17;AF=0.315;AN=54;BaseQRankSum=11.349;DP=295;FS=37.635;HRun=0;HaplotypeScore=65.1380;InbreedingCoeff=-0.3573;MQ=49.05;MQ0=14;MQRankSum=-7.040;QD=9.57;ReadPosRankSum=11.323;VQSLOD=-0.3584;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:22:17.97:122,0,18	0/1:6,0:5:42.65:43,0,53	0/0:27,0:7:17.53:0,18,190	0/0:11,0:3:1.76:0,2,25	./.	0/1:10,0:10:48.31:48,0,123	0/1:15,0:15:56.36:56,0,58	0/1:13,0:9:30.62:31,0,98	0/0:5,0:5:6.14:0,6,110	0/1:9,1:9:36.46:164,0,36	0/1:14,0:14:61.51:62,0,178	0/0:4,0:4:2.22:0,2,7	0/0:5,0:5:11.97:0,12,243	0/0:6,0:6:11.78:0,12,231	0/0:10,0:10:15.02:0,15,312	0/1:15,0:15:39.81:222,0,40	1/1:22,0:22:12.19:454,12,0	0/0:2,0:2:6:0,6,75	0/1:14,1:14:55.48:265,0,55	0/1:10,0:10:90.84:91,0,101	0/1:7,0:7:14.71:15,0,47	0/1:14,0:14:86.42:169,0,86	0/0:3,0:3:5.71:0,6,32	0/0:5,0:5:11.90:0,12,119	0/0:6,0:5:14.98:0,15,123	0/1:7,1:8:56.75:101,0,57	0/1:16,0:15:38.88:270,0,39	0/1:10,1:9:50.75:51,0,98
chr10	84741720	.	GAAA	G	5657.59	PASS	AB=0.556;AC=21;AF=0.375;AN=56;BaseQRankSum=-2.398;DP=482;FS=15.108;HRun=12;HaplotypeScore=85.9632;InbreedingCoeff=0.8497;MQ=58.14;MQ0=7;MQRankSum=-0.996;QD=25.95;ReadPosRankSum=2.048;VQSLOD=2.2633;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,1:41:0.13:0,0,54	1/1:0,8:8:12.03:152,12,0	0/0:17,0:11:27.07:0,27,402	0/0:21,0:11:8.88:0,9,122	0/0:6,0:8:21.07:0,21,382	0/0:1,0:9:14.92:0,15,187	0/0:4,0:19:29.49:0,29,229	1/1:1,21:20:53.70:611,54,0	0/0:7,0:7:21.07:0,21,372	1/1:2,22:24:63.13:748,63,0	1/1:2,24:27:52.65:666,53,0	0/0:15,0:17:48.14:0,48,858	0/0:7,0:8:18.06:0,18,331	0/0:8,0:8:21.02:0,21,368	0/0:11,0:11:33.08:0,33,534	1/1:0,10:10:24.07:303,24,0	1/1:1,33:34:63.17:793,63,0	0/0:15,0:17:48.04:0,48,819	1/1:5,22:27:63.05:741,63,0	1/1:2,11:14:25.61:335,26,0	1/1:0,18:18:39.11:493,39,0	1/1:3,16:19:38.98:472,39,0	0/0:15,0:17:42.14:0,42,736	0/0:16,0:19:43.68:0,44,783	0/0:2,0:13:26.56:0,27,400	0/0:5,0:18:4.31:0,4,525	0/1:3,12:15:11.20:346,0,11	0/0:1,0:8:12.04:0,12,172
chr10	84741911	.	A	AAAC	1005.68	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=-1.720;DP=468;FS=0.000;HRun=0;HaplotypeScore=78.0239;InbreedingCoeff=0.4880;MQ=50.36;MQ0=19;MQRankSum=-3.445;QD=11.17;ReadPosRankSum=2.090;VQSLOD=2.7025;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:58.99:940,59,0	0/0:8,0:8:21.03:0,21,203	0/0:29,0:8:19.64:0,20,166	0/1:20,0:7:8.90:9,0,115	0/0:9,0:9:16.87:0,17,140	0/0:8,0:7:17.98:0,18,161	1/1:9,0:9:14.92:176,15,0	0/0:40,0:37:63.01:0,63,658	0/0:14,0:14:32.90:0,33,299	0/0:24,0:23:59.97:0,60,540	0/0:15,0:15:38.81:0,39,334	0/0:17,0:17:39:0,39,442	0/0:11,0:11:24:0,24,264	0/0:11,0:11:21.75:0,22,194	0/0:15,0:14:33.82:0,34,325	0/0:13,0:13:29.90:0,30,252	0/0:33,0:31:72.01:0,72,661	0/0:15,0:14:35.97:0,36,390	0/0:26,0:22:28.48:0,28,365	0/1:9,0:7:0.83:1,0,111	0/0:19,0:18:20.44:0,20,354	0/1:8,0:7:3.64:4,0,105	0/0:9,0:9:18.02:0,18,203	0/0:19,0:19:33.35:0,33,318	0/0:17,0:17:35.98:0,36,349	0/0:19,0:19:50.79:0,51,443	0/1:9,0:8:6.40:6,0,94	0/0:4,0:3:9:0,9,82
chr10	84742098	.	T	TA	2702.05	PASS	AB=0.812;AC=26;AF=0.464;AN=56;BaseQRankSum=-4.800;DP=516;FS=1.432;HRun=14;HaplotypeScore=63.5795;InbreedingCoeff=0.6626;MQ=54.09;MQ0=34;MQRankSum=0.448;QD=8.39;ReadPosRankSum=-2.111;VQSLOD=2.2420;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,28:44:30.50:397,30,0	0/1:5,8:13:30.80:127,0,31	0/1:24,1:10:8.02:34,0,8	0/0:17,0:7:1.73:0,2,32	0/1:24,3:27:2.28:2,0,217	0/0:2,0:11:18.33:0,18,53	1/1:4,0:6:8.52:43,9,0	1/1:11,11:17:33.63:264,34,0	0/0:18,0:19:33.47:0,33,201	1/1:9,18:28:22.16:378,22,0	1/1:3,12:16:7.74:190,8,0	0/0:17,0:16:3.19:0,3,189	0/0:11,0:12:23.61:0,24,154	0/0:14,0:14:23.50:0,24,150	0/0:16,0:16:34.97:0,35,219	1/1:4,12:15:13.73:244,14,0	1/1:12,24:33:23.81:414,24,0	0/0:22,0:21:47.10:0,47,300	0/1:17,8:23:5.82:174,0,6	1/1:5,10:14:29.75:237,30,0	1/1:3,6:7:15:132,15,0	1/1:0,4:5:8.97:63,9,0	0/0:9,0:8:16.16:0,16,90	0/0:8,0:10:22.73:0,23,140	0/0:4,0:9:13.11:0,13,47	0/0:7,0:25:41.61:0,42,133	1/1:12,7:17:12.97:207,13,0	0/0:2,0:5:10.19:0,10,29
chr10	84742459	.	AAAGAAAGGAAGGAAGG	A	9912.50	PASS	AB=0.531;AC=31;AF=0.554;AN=56;BaseQRankSum=10.573;DP=543;FS=0.846;HRun=0;HaplotypeScore=195.8244;InbreedingCoeff=0.8567;MQ=60.28;MQ0=2;MQRankSum=-4.157;QD=33.26;ReadPosRankSum=-0.933;VQSLOD=3.6420;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:18.06:743,18,0	1/1:0,7:7:9.03:421,9,0	0/0:11,0:8:20.92:0,21,216	0/0:9,0:6:12.01:0,12,174	0/0:21,0:21:60.17:0,60,3423	1/1:2,0:19:18.05:229,18,0	0/0:1,0:32:30.09:0,30,455	1/1:17,0:16:45.09:789,45,0	0/0:16,0:16:48.13:0,48,2630	1/1:2,21:22:45.47:1050,45,0	1/1:1,10:11:14.83:303,15,0	0/0:15,0:15:39.12:0,39,2253	0/0:26,0:26:69.19:0,69,3734	0/0:22,0:22:60.16:0,60,3574	0/0:25,0:25:72.15:0,72,3350	1/1:0,18:18:15.05:701,15,0	1/1:1,32:33:15.05:701,15,0	0/0:22,0:22:66.14:0,66,2888	1/1:1,23:24:65.98:1351,66,0	1/1:0,14:14:23.79:694,24,0	1/1:0,21:21:3.01:140,3,0	1/1:0,12:12:29.96:1027,30,0	0/0:13,0:13:39.10:0,39,1859	0/0:33,0:33:87.22:0,87,4897	1/1:1,0:8:18.06:235,18,0	0/1:3,0:26:84.78:370,0,85	1/1:0,25:25:24.08:1119,24,0	1/1:0,0:5:3.01:39,3,0
chr10	84742481	.	AG	A	578.85	PASS	AB=0.956;AC=8;AF=0.143;AN=56;BaseQRankSum=5.881;DP=563;FS=0.687;HRun=2;HaplotypeScore=109.8882;InbreedingCoeff=-0.1801;MQ=54.11;MQ0=5;MQRankSum=0.445;QD=3.49;ReadPosRankSum=1.360;VQSLOD=0.3768;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:41.98:42,0,269	0/0:6,0:6:5.45:0,5,15	0/0:13,0:5:12.01:0,12,135	0/0:12,0:6:15.05:0,15,195	0/0:21,0:21:63.20:0,63,918	0/0:17,0:17:12.55:0,13,37	0/0:35,0:35:49.92:0,50,459	0/1:5,6:10:99:201,0,121	0/0:18,0:18:51.15:0,51,714	0/1:22,0:21:99:114,0,123	0/1:14,0:14:22.16:22,0,155	0/0:15,0:15:45.15:0,45,665	0/0:26,0:26:78.25:0,78,1129	0/0:19,0:19:57.18:0,57,830	0/0:26,0:26:78.20:0,78,1092	0/0:19,0:19:10.38:0,10,61	0/0:33,0:33:19.03:0,19,162	0/0:21,0:21:60.15:0,60,856	0/1:26,0:25:99:157,0,369	0/1:16,0:15:28.32:28,0,199	0/0:23,0:23:3.87:0,4,60	0/1:13,0:13:31.48:108,0,31	0/0:14,0:14:42.13:0,42,603	0/0:36,0:36:99:0,102,1450	0/0:9,0:9:18.29:0,18,103	0/0:25,0:25:59.96:0,60,601	0/1:26,0:26:40.83:41,0,41	0/0:9,0:9:14.26:0,14,172
chr10	84743325	.	CTGTG	C	1043.36	PASS	AB=0.854;AC=24;AF=0.462;AN=52;BaseQRankSum=3.760;DP=531;FS=4.106;HRun=0;HaplotypeScore=108.8438;InbreedingCoeff=0.2625;MQ=54.93;MQ0=18;MQRankSum=-1.817;QD=3.88;ReadPosRankSum=-2.057;VQSLOD=1.9531;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:25:5.38:45,5,0	./.	./.	0/0:39,0:20:0:0,0,0	0/0:22,0:27:29.63:0,30,447	0/1:13,0:13:64.25:119,0,64	1/1:19,0:18:0.47:1,0,0	0/0:27,0:25:2.88:0,3,16	0/0:10,0:15:14.54:0,15,130	0/1:25,3:28:22.82:30,0,23	1/1:8,7:14:11.95:138,12,0	0/0:14,0:14:23.93:0,24,349	0/0:9,0:9:9.01:0,9,99	0/0:13,0:13:12.04:0,12,281	0/0:11,0:11:15.05:0,15,336	1/1:5,10:14:1.06:171,1,0	0/1:28,4:33:3.94:224,0,4	0/1:19,1:20:18.91:19,0,159	1/1:12,0:14:3.01:39,3,0	0/0:8,0:7:0:0,0,0	0/0:21,0:29:0:0,0,0	1/1:11,0:13:11.01:82,11,0	1/1:9,0:9:2.99:25,3,0	0/0:31,0:30:29.60:0,30,498	0/1:4,3:8:6.97:40,0,7	0/1:24,1:30:41.11:188,0,41	1/1:6,0:13:3:28,3,0	1/1:3,1:4:3.01:46,3,0
chr10	84743827	.	CTTCTTTTT	C	1753.84	PASS	AB=0.955;AC=14;AF=0.250;AN=56;BaseQRankSum=-1.738;DP=433;FS=0.000;HRun=0;HaplotypeScore=112.8989;InbreedingCoeff=0.2597;MQ=59.19;MQ0=20;MQRankSum=3.734;QD=9.69;ReadPosRankSum=3.573;VQSLOD=1.9084;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:56.83:0,57,1374	1/1:2,1:6:12.04:207,12,0	0/1:17,0:7:0.43:0,0,17	0/0:9,0:7:13.89:0,14,127	0/0:21,0:19:42.08:0,42,819	0/0:14,0:14:19.79:0,20,337	0/0:14,0:13:29.76:0,30,415	0/0:27,0:25:6.51:0,7,591	0/0:14,0:14:38.86:0,39,676	1/1:14,1:17:14.27:386,14,0	0/1:10,2:16:81.38:334,0,81	0/0:7,0:7:15.85:0,16,104	0/0:10,0:10:29.95:0,30,714	0/0:15,0:15:28.92:0,29,306	0/0:15,0:15:43.80:0,44,739	0/1:10,1:9:0.90:135,0,1	1/1:14,4:18:7.92:450,8,0	0/0:15,0:13:31.61:0,32,725	0/1:25,0:21:53.99:54,0,454	0/1:12,0:12:95.77:96,0,152	0/1:15,0:15:99:167,0,116	0/0:12,0:13:6.20:0,6,471	0/0:20,0:19:53.15:0,53,968	0/0:13,0:13:18.49:0,18,331	0/1:14,0:14:16.39:16,0,439	0/1:28,0:27:70.76:71,0,485	0/0:16,0:15:8.69:0,9,584	0/0:6,0:6:15.02:0,15,227
chr10	84744533	.	A	AT	7457.09	PASS	AB=0.923;AC=35;AF=0.625;AN=56;BaseQRankSum=-11.967;DP=447;FS=5.783;HRun=8;HaplotypeScore=48.1003;InbreedingCoeff=0.9465;MQ=83.66;MQ0=0;MQRankSum=-1.931;QD=25.45;ReadPosRankSum=1.569;VQSLOD=5.6017;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,27:33:72.21:831,72,0	1/1:1,4:5:12.04:138,12,0	0/0:13,0:13:22.34:0,22,194	0/0:17,0:19:21.50:0,22,334	0/0:26,0:26:66.03:0,66,604	1/1:4,15:19:42.12:485,42,0	1/1:1,10:11:21.06:243,21,0	1/1:8,16:24:48.14:552,48,0	0/0:15,0:15:38.96:0,39,357	1/1:2,10:12:30.09:345,30,0	1/1:4,16:20:51.15:583,51,0	0/0:15,0:15:42.02:0,42,384	0/1:11,1:12:1.60:2,0,242	0/0:10,0:10:30.02:0,30,275	0/0:12,0:12:30.01:0,30,275	1/1:3,9:12:23.85:277,24,0	1/1:1,24:25:66.20:762,66,0	0/0:18,0:18:50.90:0,51,454	1/1:4,16:20:48.11:532,48,0	1/1:0,13:13:30.09:346,30,0	1/1:2,9:11:27.08:312,27,0	1/1:1,10:11:25.77:340,26,0	0/0:10,0:10:17.98:0,18,162	0/0:15,0:15:44.01:0,44,383	1/1:3,14:17:33.10:381,33,0	1/1:3,19:22:57.17:657,57,0	1/1:1,15:16:39.12:450,39,0	1/1:2,7:10:20.89:222,21,0
chr10	84744757	.	G	GA	1324.27	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.242;DP=461;FS=1.902;HRun=8;HaplotypeScore=66.4620;InbreedingCoeff=0.9131;MQ=69.99;MQ0=4;MQRankSum=-1.425;QD=25.97;ReadPosRankSum=2.174;VQSLOD=4.5717;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,25:33:84.20:941,84,0	0/0:7,0:7:21.01:0,21,192	0/0:31,0:15:8.19:0,8,248	0/0:28,0:15:23.65:0,24,198	0/0:25,0:25:72.04:0,72,658	0/0:19,1:20:13.38:0,13,371	1/1:3,14:17:45.09:504,45,0	0/0:26,0:25:63.03:0,63,576	0/0:5,0:5:15.01:0,15,137	0/0:20,0:20:51.02:0,51,463	0/0:12,0:12:30.02:0,30,275	0/0:13,0:13:33.01:0,33,300	0/0:5,0:5:12:0,12,110	0/0:9,0:9:21.01:0,21,192	0/0:12,0:12:24.01:0,24,220	0/0:12,0:12:33.02:0,33,302	0/0:28,0:28:69:0,69,624	0/0:27,0:27:63.02:0,63,576	0/0:24,0:24:57:0,57,517	0/0:13,0:13:33:0,33,297	0/0:9,0:9:21:0,21,192	0/0:6,0:6:18.01:0,18,165	0/0:14,0:14:38.87:0,39,352	0/0:19,0:18:45.02:0,45,412	0/0:11,0:11:33.01:0,33,298	0/0:14,0:14:36.01:0,36,326	0/0:10,0:10:24:0,24,220	0/0:10,0:10:15.36:0,15,160
chr10	84744961	.	TA	T	5046.26	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=8.447;DP=355;FS=3.895;HRun=9;HaplotypeScore=41.0431;InbreedingCoeff=0.9148;MQ=66.28;MQ0=1;MQRankSum=-3.259;QD=23.47;ReadPosRankSum=0.518;VQSLOD=5.4418;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.15:0,54,614	1/1:0,5:5:15.01:136,15,0	0/0:12,0:10:23.28:0,23,216	0/0:10,0:8:9:0,9,102	0/0:21,0:21:57.12:0,57,634	1/1:5,17:22:48.02:439,48,0	0/0:7,0:7:15.04:0,15,173	1/1:4,17:21:51:461,51,0	0/0:2,0:2:6.02:0,6,69	1/1:1,13:14:13.22:328,13,0	1/1:1,17:18:45.02:410,45,0	0/0:9,0:9:21.06:0,21,242	0/0:13,0:13:33.09:0,33,372	0/0:9,0:9:27.07:0,27,302	0/0:8,0:8:24.07:0,24,277	1/1:1,14:15:33.02:302,33,0	1/1:0,22:22:66.04:604,66,0	0/0:20,0:20:54.11:0,54,602	1/1:2,13:15:39.02:357,39,0	1/1:2,7:9:24.01:219,24,0	1/1:1,3:4:12.01:110,12,0	1/1:2,1:3:3:27,3,0	0/0:3,0:3:3.01:0,3,35	0/0:6,0:6:18.05:0,18,208	1/1:1,8:9:26.61:230,27,0	1/1:3,11:14:39.01:353,39,0	1/1:1,21:22:63.03:576,63,0	1/1:3,19:22:54.02:494,54,0
chr10	84745018	.	T	TA	2621.83	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-5.047;DP=431;FS=2.006;HRun=10;HaplotypeScore=62.3466;InbreedingCoeff=0.9151;MQ=75.71;MQ0=0;MQRankSum=-0.988;QD=23.20;ReadPosRankSum=-4.202;VQSLOD=2.7914;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:62.91:0,63,517	0/0:3,0:3:5.99:0,6,49	0/0:22,0:17:14.56:0,15,163	0/0:16,0:14:18.57:0,19,201	0/0:32,0:33:76.91:0,77,621	0/0:24,0:24:51.45:0,51,481	0/0:9,0:9:26.97:0,27,222	1/1:7,31:38:89.88:931,90,0	0/0:5,0:5:14.98:0,15,122	0/0:16,0:16:38.95:0,39,320	0/0:12,0:13:29:0,29,227	0/0:7,0:7:17.97:0,18,148	0/0:9,0:9:20.96:0,21,172	0/0:12,0:12:29.94:0,30,243	0/0:11,0:11:32.96:0,33,271	0/0:10,0:10:20.98:0,21,172	0/0:21,0:21:50.94:0,51,419	0/0:26,0:26:57.45:0,57,528	1/1:10,17:27:63.48:644,63,0	1/1:2,5:7:18.05:192,18,0	1/1:1,10:11:18.05:192,18,0	1/1:0,2:2:6.02:64,6,0	0/0:2,0:3:5.03:0,5,31	0/0:6,0:6:14.98:0,15,123	0/0:12,0:12:29.94:0,30,242	0/0:13,0:13:32.95:0,33,271	1/1:8,20:28:75.16:781,75,0	0/0:22,0:22:50.91:0,51,418
chr10	84745178	.	ACC	A	1932.20	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=1.258;DP=312;FS=8.914;HRun=11;HaplotypeScore=48.6920;InbreedingCoeff=0.8312;MQ=77.03;MQ0=5;MQRankSum=-0.796;QD=12.88;ReadPosRankSum=3.051;VQSLOD=0.8058;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:24.07:0,24,293	1/1:0,4:4:12.03:128,12,0	0/0:29,0:17:9.10:0,9,269	0/0:30,0:18:20:0,20,193	0/0:10,0:11:20.56:0,21,286	1/1:3,7:10:15.03:160,15,0	0/0:2,0:10:5.42:0,5,27	0/1:27,0:27:3.65:148,0,4	0/0:5,0:7:17.50:0,18,208	1/1:1,8:9:24.06:254,24,0	1/1:1,2:3:6.01:64,6,0	0/0:9,0:9:11.97:0,12,184	0/0:9,0:9:21.07:0,21,322	0/0:7,0:7:18.06:0,18,272	0/0:14,0:15:41.62:0,42,575	1/1:0,10:10:21.05:224,21,0	1/1:1,14:16:35.81:363,36,0	0/0:9,0:9:24.08:0,24,364	1/1:11,0:11:12.82:99,13,0	1/1:4,0:5:11.86:81,12,0	1/1:9,0:9:8.74:51,9,0	1/1:0,2:2:6.01:63,6,0	0/0:3,0:3:6.02:0,6,90	0/0:12,0:12:27.07:0,27,393	1/1:0,7:7:18.05:192,18,0	1/1:5,3:8:13.26:131,13,0	1/1:19,0:19:20.58:128,21,0	1/1:4,6:10:5.98:64,6,0
chr10	84745188	.	CCA	C	1543.39	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=4.385;DP=324;FS=0.000;HRun=0;HaplotypeScore=53.8451;InbreedingCoeff=0.4104;MQ=83.23;MQ0=5;MQRankSum=-1.066;QD=10.95;ReadPosRankSum=4.161;VQSLOD=2.6951;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:24.05:0,24,275	1/1:4,0:4:8.71:34,9,0	0/0:35,0:20:2.03:0,2,155	0/0:34,0:20:18.62:0,19,184	0/0:13,0:13:33.17:0,33,425	0/1:9,0:9:13.45:20,0,13	0/0:8,0:8:13.18:0,13,53	1/1:0,21:21:59.49:621,59,0	0/0:9,0:9:23.66:0,24,239	0/1:12,0:12:31.80:32,0,83	0/1:3,0:3:18.71:19,0,19	0/0:6,0:6:15.04:0,15,232	0/0:11,0:11:33.06:0,33,461	0/0:7,0:7:21.03:0,21,252	0/0:17,0:17:47.75:0,48,619	0/1:12,0:12:27.03:27,0,33	0/1:17,0:17:17.73:42,0,18	0/0:12,0:12:33.05:0,33,466	1/1:0,10:10:29.89:287,30,0	1/1:1,5:6:14.98:183,15,0	1/1:0,8:8:9.03:124,9,0	1/1:2,0:2:4.56:17,5,0	0/0:2,0:2:5.99:0,6,48	0/0:13,0:13:32.91:0,33,495	0/1:9,0:9:19.43:19,0,33	1/1:4,0:4:8.69:35,9,0	1/1:1,16:17:21.04:271,21,0	0/1:7,0:7:4.85:5,0,18
chr10	84745325	.	A	AG	899.28	PASS	AB=0.736;AC=15;AF=0.288;AN=52;BaseQRankSum=-1.957;DP=161;FS=6.098;HRun=0;HaplotypeScore=30.1582;InbreedingCoeff=0.1354;MQ=38.18;MQ0=5;MQRankSum=1.025;QD=10.58;ReadPosRankSum=2.566;VQSLOD=2.9761;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:15.53:0,16,102	0/1:3,2:5:9.81:33,0,10	./.	./.	0/0:15,0:15:33.48:0,33,261	0/1:3,1:4:22.26:22,0,23	0/0:5,0:5:14.88:0,15,118	0/1:6,2:7:6.36:61,0,6	0/0:5,0:5:14.84:0,15,99	1/1:1,6:7:11.13:179,11,0	0/1:8,3:11:16.05:82,0,16	0/0:5,0:5:7.46:0,7,57	0/0:5,0:4:8.94:0,9,81	0/0:1,0:1:2.84:0,3,14	0/0:4,0:4:8.90:0,9,60	1/1:3,5:9:0.01:132,0,0	1/1:7,3:9:1.89:92,2,0	0/0:5,0:5:14.94:0,15,141	0/0:2,0:2:0.69:0,1,3	0/0:3,0:3:4.77:0,5,24	0/0:3,0:3:0.47:0,0,1	0/0:3,0:2:4.53:0,5,15	0/0:2,0:2:2.90:0,3,16	0/0:3,0:3:0:0,0,0	0/1:4,2:6:17.25:72,0,17	1/1:2,3:5:7.62:90,8,0	0/1:6,4:9:29.01:82,0,29	0/1:3,6:9:9.55:197,0,10
chr10	84745329	.	GA	G	185.17	PASS	AB=0.890;AC=10;AF=0.200;AN=50;BaseQRankSum=-2.000;DP=150;FS=0.000;HRun=17;HaplotypeScore=27.5808;InbreedingCoeff=0.2341;MQ=32.01;MQ0=5;MQRankSum=-2.050;QD=4.63;ReadPosRankSum=-3.330;VQSLOD=-0.1441;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:21.25:0,21,227	0/0:3,0:3:7.21:0,7,56	./.	./.	0/0:15,0:15:27.30:0,27,250	0/0:3,0:3:6.07:0,6,48	0/0:4,0:4:12.04:0,12,156	0/1:5,3:7:12.51:113,0,13	0/0:4,0:4:6.49:0,6,79	0/0:7,0:7:3.90:0,4,115	0/0:10,0:10:22.44:0,22,235	0/0:5,0:5:11.40:0,11,131	0/0:5,0:4:8.99:0,9,102	0/0:1,0:1:2.60:0,3,10	0/0:4,0:4:7.22:0,7,64	0/1:9,0:9:10.03:10,0,112	0/0:10,0:9:16.15:0,16,142	0/0:5,0:5:12.04:0,12,162	1/1:1,1:2:2.11:33,2,0	1/1:1,1:2:3.01:33,3,0	0/0:3,0:3:0:0,0,0	1/1:1,2:2:6.01:63,6,0	0/0:1,0:1:2.22:0,2,7	./.	0/1:6,0:6:10.58:11,0,72	0/0:4,0:4:5.23:0,5,63	0/1:8,2:9:12.37:50,0,12	0/0:10,0:9:24.75:0,25,302
chr10	84746422	.	TA	T	5275.17	PASS	AB=0.583;AC=29;AF=0.518;AN=56;BaseQRankSum=8.433;DP=513;FS=5.006;HRun=12;HaplotypeScore=55.4601;InbreedingCoeff=0.9547;MQ=69.27;MQ0=2;MQRankSum=-1.918;QD=17.88;ReadPosRankSum=0.815;VQSLOD=6.0937;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:48.10:0,48,487	1/1:2,6:8:17.91:139,18,0	0/0:14,1:10:19.72:0,20,143	0/0:8,1:8:14.36:0,14,111	0/0:20,0:20:39.06:0,39,389	1/1:3,19:22:50.39:394,50,0	0/0:8,0:9:17.18:0,17,201	1/1:6,25:31:74.66:577,75,0	0/0:22,0:22:51.10:0,51,518	1/1:5,13:18:38.82:299,39,0	1/1:5,14:19:35.83:279,36,0	0/0:16,0:16:36.96:0,37,368	0/0:9,0:10:29.88:0,30,279	0/0:22,1:24:45.74:0,46,617	0/0:22,0:23:53.10:0,53,554	1/1:4,21:25:53.79:418,54,0	1/1:3,19:23:49.85:377,50,0	0/0:22,0:22:40.08:0,40,547	0/1:4,10:14:0.82:179,0,1	1/1:4,24:28:41.29:504,41,0	1/1:2,13:15:38.84:302,39,0	1/1:1,13:14:35.85:279,36,0	0/0:17,0:17:36.07:0,36,365	0/0:10,0:10:30.05:0,30,299	1/1:0,17:18:48.29:372,48,0	1/1:3,21:24:62.74:484,63,0	1/1:7,17:24:50.78:395,51,0	1/1:0,12:12:35.86:279,36,0
chr10	84746832	.	AT	A	6265.66	PASS	AB=0.609;AC=33;AF=0.589;AN=56;BaseQRankSum=10.208;DP=407;FS=3.421;HRun=9;HaplotypeScore=42.2280;InbreedingCoeff=0.8329;MQ=62.66;MQ0=2;MQRankSum=-1.289;QD=21.68;ReadPosRankSum=0.584;VQSLOD=5.2226;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,39:41:99:1043,114,0	1/1:1,5:6:15.01:137,15,0	0/0:4,0:4:2.96:0,3,19	0/0:3,0:3:6.02:0,6,69	0/0:13,0:13:36.07:0,36,401	1/1:1,10:11:30.01:275,30,0	1/1:12,0:12:0.13:67,0,0	1/1:2,24:26:72.04:659,72,0	0/0:17,0:17:45.12:0,45,509	1/1:2,12:13:33.02:302,33,0	0/1:5,9:14:7.61:193,0,8	0/0:19,0:19:51.15:0,51,589	0/0:8,0:8:24.07:0,24,274	0/0:8,0:8:18.04:0,18,199	0/0:14,0:14:42.11:0,42,476	1/1:2,13:15:39.01:357,39,0	1/1:5,20:25:56.05:501,56,0	0/0:21,0:21:57.17:0,57,658	1/1:1,20:20:60.02:545,60,0	1/1:0,11:12:35.02:301,35,0	1/1:3,11:14:27.01:247,27,0	1/1:2,2:4:6:55,6,0	0/0:3,0:3:9.01:0,9,94	0/0:7,0:8:20.65:0,21,178	1/1:2,14:16:33.02:302,33,0	1/1:3,23:26:69:626,69,0	1/1:4,19:23:51.02:467,51,0	1/1:2,7:8:21.01:192,21,0
chr10	84747557	.	TA	T	2650.43	PASS	AB=0.875;AC=13;AF=0.232;AN=56;BaseQRankSum=8.815;DP=422;FS=9.757;HRun=10;HaplotypeScore=43.5992;InbreedingCoeff=0.8540;MQ=61.69;MQ0=0;MQRankSum=1.246;QD=18.28;ReadPosRankSum=0.116;VQSLOD=3.4892;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.12:0,60,650	0/0:3,0:3:9.02:0,9,100	0/0:7,0:5:14.97:0,15,139	0/0:4,0:3:5.17:0,5,20	0/0:31,0:31:81.22:0,81,896	0/0:27,0:27:72.19:0,72,789	0/0:7,0:7:18.05:0,18,198	1/1:5,28:32:80.96:699,81,0	0/0:7,0:7:18.05:0,18,199	0/0:23,0:22:54.14:0,54,590	0/0:17,0:18:41.88:0,42,445	0/0:8,0:8:18.05:0,18,199	0/0:11,0:11:18.05:0,18,198	0/0:7,0:7:15.04:0,15,165	0/0:9,0:9:21.05:0,21,224	0/0:10,0:10:27.07:0,27,299	0/0:15,1:16:19.07:0,19,439	0/1:12,2:14:25.04:25,0,205	1/1:2,20:22:59.99:521,60,0	1/1:2,18:20:50.98:443,51,0	1/1:2,16:18:38.99:339,39,0	1/1:0,9:9:23.98:208,24,0	0/0:10,0:10:27.07:0,27,299	0/0:10,0:10:24.06:0,24,266	0/0:13,0:13:39.10:0,39,424	0/0:18,0:18:42.11:0,42,464	1/1:2,25:27:71.02:605,71,0	0/0:14,0:14:30.08:0,30,330
chr10	84748658	.	GA	G	1537.25	PASS	AB=0.941;AC=9;AF=0.161;AN=56;BaseQRankSum=7.241;DP=652;FS=9.198;HRun=10;HaplotypeScore=71.6913;InbreedingCoeff=0.8134;MQ=75.92;MQ0=0;MQRankSum=-0.509;QD=17.47;ReadPosRankSum=1.883;VQSLOD=3.9170;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:32:74.35:0,74,398	0/0:7,0:7:15.04:0,15,166	0/1:15,1:16:25.60:26,0,149	0/0:14,0:13:9.73:0,10,73	0/0:18,1:19:28.02:0,28,511	1/1:0,16:16:44.99:391,45,0	0/0:27,0:27:60.63:0,61,658	0/0:28,1:31:48.97:0,49,744	0/0:28,1:30:52.02:0,52,777	0/0:24,0:24:63.16:0,63,690	0/0:11,1:12:3.61:0,4,239	0/0:19,0:21:56.99:0,57,612	0/0:24,0:24:57.13:0,57,615	0/0:26,0:27:46.14:0,46,686	0/0:23,0:23:54.13:0,54,590	0/0:22,1:23:31.11:0,31,571	0/0:34,0:34:99:0,99,1081	0/0:28,0:27:84.22:0,84,922	0/0:22,1:24:14.54:0,15,544	0/0:25,0:27:69:0,69,730	0/0:38,1:40:48.06:0,48,905	0/0:21,0:21:45.11:0,45,489	0/0:11,0:12:26.90:0,27,272	0/0:28,1:30:57.97:0,58,837	1/1:3,20:23:38.48:485,38,0	1/1:1,17:18:27.11:410,27,0	0/0:31,1:34:64.03:0,64,917	1/1:1,14:15:44.99:390,45,0
chr10	84749550	.	AT	A	2154.04	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-4.133;DP=592;FS=2.436;HRun=12;HaplotypeScore=83.0975;InbreedingCoeff=0.9849;MQ=76.13;MQ0=0;MQRankSum=-0.079;QD=15.72;ReadPosRankSum=-0.933;VQSLOD=4.2023;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:33:59.66:0,60,302	0/0:1,0:12:25.83:0,26,139	0/0:15,0:13:12.56:0,13,134	0/0:13,0:12:11.21:0,11,84	0/0:31,0:31:78.14:0,78,777	0/0:6,0:22:42.61:0,43,214	0/0:18,0:18:51.10:0,51,518	1/1:10,24:34:62.67:488,63,0	0/0:16,0:18:44.92:0,45,441	0/0:5,0:31:74.17:0,74,389	0/0:5,0:24:54.64:0,55,303	0/0:12,0:12:30.04:0,30,295	0/0:18,1:20:30.63:0,31,449	0/0:16,0:16:42.08:0,42,426	0/0:19,0:19:45.07:0,45,446	0/0:3,0:21:34.29:0,34,181	0/0:3,0:27:51.27:0,51,265	0/0:15,0:17:44.74:0,45,412	1/1:4,24:29:37.27:462,37,0	1/1:5,18:23:53.74:418,54,0	1/1:5,12:17:32.86:255,33,0	1/1:0,21:21:56.78:441,57,0	0/0:15,1:18:18.49:0,18,324	0/0:17,0:17:48.10:0,48,487	0/0:3,0:24:54.10:0,54,276	0/0:10,0:30:66.30:0,66,386	1/1:0,13:13:35.86:279,36,0	0/0:3,0:17:39.77:0,40,200
chr10	84751864	.	T	TC	1868.59	PASS	AB=0.931;AC=18;AF=0.321;AN=56;BaseQRankSum=2.927;DP=589;FS=44.077;HRun=0;HaplotypeScore=100.9037;InbreedingCoeff=-0.2802;MQ=59.94;MQ0=5;MQRankSum=-0.776;QD=5.66;ReadPosRankSum=9.067;VQSLOD=1.1372;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:65.65:66,0,232	0/1:13,1:14:77.54:78,0,135	0/0:27,0:8:0.63:0,1,75	0/0:21,0:11:15.07:0,15,98	0/0:31,0:31:66.18:0,66,480	0/1:23,0:23:99:150,0,131	0/1:28,0:28:25.52:286,0,26	0/1:13,14:26:41.97:191,0,42	0/0:19,0:19:30.57:0,31,221	0/1:23,0:23:99:157,0,133	0/1:10,0:10:2.91:82,0,3	0/0:29,0:29:65.03:0,65,438	0/0:17,0:17:42.65:0,43,289	0/0:16,0:16:23.13:0,23,146	0/0:25,0:25:60.33:0,60,443	0/1:6,0:6:6.01:61,0,6	0/1:25,0:25:60.37:158,0,60	0/0:27,0:27:60.05:0,60,454	0/1:17,0:16:76.42:76,0,109	0/1:18,0:18:76.94:77,0,113	0/1:11,0:11:42.18:68,0,42	1/1:14,0:14:8.77:143,9,0	0/0:17,0:16:22.96:0,23,160	0/0:30,0:30:64.17:0,64,483	0/1:7,7:15:11.59:12,0,39	0/1:12,13:23:71.43:151,0,71	0/1:28,0:28:99:162,0,225	0/1:15,0:15:41.49:113,0,41
chr10	84752180	.	A	AGCTTACAAGC	8768.52	PASS	AB=0.574;AC=7;AF=0.125;AN=56;BaseQRankSum=-7.287;DP=665;FS=1.588;HRun=0;HaplotypeScore=210.7983;InbreedingCoeff=0.8360;MQ=77.09;MQ0=0;MQRankSum=-9.805;QD=109.61;ReadPosRankSum=0.305;VQSLOD=5.2303;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,141,4303	0/0:7,0:7:21.07:0,21,654	0/0:27,0:27:49.50:0,49,1318	0/0:27,0:27:57.17:0,57,1488	0/0:36,0:36:96.33:0,96,2875	1/1:5,15:20:54.19:2552,54,0	0/0:19,0:19:48.16:0,48,1416	0/0:32,0:32:75.26:0,75,2261	0/0:25,0:25:63.20:0,63,1872	0/0:29,0:29:81.28:0,81,2482	0/0:15,0:15:33.11:0,33,1028	0/0:22,0:22:63.21:0,63,1845	0/0:21,0:21:51.17:0,51,1555	0/0:24,0:24:60.21:0,60,1880	0/0:24,0:24:63.22:0,63,1979	0/0:22,0:22:63.17:0,63,1919	0/0:22,0:22:57.17:0,57,1730	0/0:13,0:13:36.12:0,36,1020	0/0:18,0:18:45.15:0,45,1366	0/0:12,0:12:33.10:0,33,743	0/0:46,0:45:99:0,111,3332	0/0:25,0:25:72.23:0,72,2126	0/0:21,0:21:51.18:0,51,1614	0/0:24,0:24:66.16:0,66,1804	1/1:6,14:20:48.16:2330,48,0	0/1:7,15:26:19.69:2909,0,20	0/0:24,0:24:63.20:0,63,1863	1/1:5,7:12:21.07:978,21,0
chr10	84752199	.	AG	A	5773.16	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.535;DP=679;FS=0.000;HRun=3;HaplotypeScore=102.4261;InbreedingCoeff=0.9988;MQ=87.09;MQ0=0;MQRankSum=-0.428;QD=33.76;ReadPosRankSum=1.012;VQSLOD=4.7018;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,157,2242	0/0:7,0:7:21.07:0,21,302	0/0:30,0:30:87.28:0,87,1216	0/0:31,0:31:85.49:0,85,1167	0/0:33,0:33:96.28:0,96,1342	0/0:20,0:20:48.16:0,48,689	1/1:0,18:18:54.17:670,54,0	1/1:0,26:26:78.23:955,78,0	0/0:28,0:28:75.25:0,75,1078	0/0:34,0:34:99:0,99,1410	0/0:18,0:18:48.15:0,48,672	0/0:28,0:28:81.27:0,81,1167	0/0:21,0:21:60.20:0,60,864	0/0:25,0:25:72.23:0,72,1018	0/0:21,0:21:63.21:0,63,907	0/0:21,0:21:57.19:0,57,820	0/0:22,0:22:66.22:0,66,949	0/0:13,0:13:36.12:0,36,518	1/1:1,14:15:42.10:504,42,0	1/1:1,15:16:45.14:557,45,0	1/1:1,42:43:99:1376,111,0	1/1:1,28:29:72.23:892,72,0	0/0:23,0:23:63.18:0,63,867	0/0:24,0:24:72.24:0,72,1037	0/0:20,0:20:39.13:0,39,561	0/0:27,0:27:75.25:0,75,1069	1/1:1,23:24:66.21:818,66,0	0/0:10,0:10:24.08:0,24,345
chr10	84752495	.	TG	T	10012.40	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=9.424;DP=580;FS=5.186;HRun=1;HaplotypeScore=58.0282;InbreedingCoeff=0.9992;MQ=76.19;MQ0=0;MQRankSum=-1.664;QD=37.93;ReadPosRankSum=-1.681;VQSLOD=4.5999;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:99:1467,105,0	0/0:7,0:7:21.07:0,21,336	0/0:15,0:15:42.14:0,42,672	0/0:18,0:18:50.80:0,51,724	0/0:25,0:25:72.25:0,72,1149	1/1:0,23:23:63.21:879,63,0	1/1:0,14:14:33.11:461,33,0	1/1:0,24:24:72.23:984,72,0	0/0:19,0:19:57.19:0,57,910	0/0:27,0:27:81.27:0,81,1276	0/0:16,0:16:48.16:0,48,767	0/0:18,0:18:54.18:0,54,862	0/0:17,0:17:51.17:0,51,814	0/0:14,0:14:42.13:0,42,648	0/0:22,0:22:63.21:0,63,1006	0/0:31,0:31:93.32:0,93,1483	0/0:25,0:25:75.26:0,75,1199	0/0:24,0:24:69.24:0,69,1103	1/1:0,20:19:54.18:755,54,0	1/1:0,14:14:39.13:544,39,0	1/1:0,28:28:81.27:1133,81,0	1/1:0,15:15:45.15:629,45,0	0/0:18,0:18:54.18:0,54,863	0/0:20,0:20:57.19:0,57,903	1/1:0,15:15:42.14:587,42,0	1/1:1,24:25:27.22:937,27,0	1/1:0,32:32:84.28:1174,84,0	1/1:0,16:16:33.11:460,33,0
chr10	84752663	.	AG	A	921.83	PASS	AC=14;AF=0.269;AN=52;BaseQRankSum=8.943;DP=448;FS=5.442;HRun=1;HaplotypeScore=75.6262;InbreedingCoeff=0.9514;MQ=30.44;MQ0=48;MQRankSum=-2.255;QD=9.22;ReadPosRankSum=-3.753;VQSLOD=-0.3237;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,10:21:26.76:188,27,0	0/0:6,0:6:17.87:0,18,176	./.	./.	0/0:34,0:33:50.70:0,51,611	0/0:26,0:23:41.29:0,41,521	0/0:14,0:8:20.86:0,21,223	1/1:10,4:13:31.48:206,31,0	0/0:20,0:15:15.05:0,15,211	0/0:16,0:15:45.14:0,45,623	0/0:11,0:11:17.89:0,18,203	0/0:18,0:16:23.74:0,24,269	0/0:10,0:9:17.99:0,18,217	0/0:12,0:10:15.05:0,15,212	0/0:12,0:11:27.02:0,27,346	0/0:18,0:17:35.35:0,35,333	0/0:33,0:17:30.50:0,31,390	0/0:14,0:10:15.01:0,15,190	1/1:0,4:6:11.19:78,11,0	1/1:5,6:11:23.78:169,24,0	1/1:3,1:3:8.93:69,9,0	1/1:9,3:13:24.19:164,24,0	0/0:17,0:17:14.70:0,15,186	0/0:16,0:11:8.79:0,9,52	0/0:17,0:16:38.78:0,39,397	0/0:29,0:26:74.97:0,75,948	1/1:10,6:17:34.54:238,35,0	0/0:22,0:20:35.95:0,36,358
chr10	84752666	.	ACC	A	1890.90	PASS	AC=14;AF=0.269;AN=52;BaseQRankSum=6.823;DP=446;FS=6.298;HRun=2;HaplotypeScore=76.6883;InbreedingCoeff=0.9464;MQ=32.12;MQ0=44;MQRankSum=-1.536;QD=18.54;ReadPosRankSum=-4.551;VQSLOD=-0.5296;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,20:20:24.07:295,24,0	0/0:6,0:6:15.05:0,15,278	./.	./.	0/0:34,0:33:53.70:0,54,969	0/0:25,0:22:45.15:0,45,829	0/0:12,0:7:18.06:0,18,315	1/1:8,8:13:39.06:461,39,0	0/0:20,0:15:18.06:0,18,306	0/0:17,0:17:51.13:0,51,898	0/0:10,0:10:18.06:0,18,334	0/0:18,0:16:26.70:0,27,494	0/0:9,0:8:15.05:0,15,279	0/0:13,0:11:18.06:0,18,334	0/0:13,0:12:30.10:0,30,533	0/0:16,0:15:32.63:0,33,592	0/0:31,0:17:33.07:0,33,542	0/0:14,0:10:15.05:0,15,279	1/1:7,4:6:12.03:135,12,0	1/1:0,11:11:24.07:289,24,0	1/1:2,4:4:9.03:105,9,0	1/1:1,13:14:27.04:312,27,0	0/0:18,0:18:17.83:0,18,334	0/0:16,0:11:6.02:0,6,111	0/0:17,0:16:39.13:0,39,706	0/0:30,0:27:81.23:0,81,1424	1/1:6,12:18:42.05:482,42,0	0/0:22,0:20:36.12:0,36,653
chr10	84752877	.	GAGCCGTGTTCAGTT	G	920.81	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.650;DP=638;FS=0.000;HRun=0;HaplotypeScore=238.4533;InbreedingCoeff=0.9939;MQ=78.78;MQ0=0;MQRankSum=-4.768;QD=76.73;ReadPosRankSum=0.237;VQSLOD=2.7598;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,7942	0/0:19,0:19:57.18:0,57,3695	0/0:20,0:20:57.20:0,57,3369	0/0:24,0:24:62.78:0,63,2763	0/0:35,0:35:96.31:0,96,6199	0/0:25,0:25:72.20:0,72,4679	1/1:4,8:12:24.08:1014,24,0	0/0:25,0:25:72.16:0,72,3995	0/0:19,0:19:54.19:0,54,3705	0/0:21,0:21:57.19:0,57,3793	0/0:21,0:21:57.20:0,57,3669	0/0:19,0:19:54.19:0,54,3666	0/0:22,0:22:57.20:0,57,3686	0/0:17,0:17:42.14:0,42,2719	0/0:23,0:23:63.22:0,63,4218	0/0:30,0:30:90.25:0,90,5569	0/0:27,0:27:81.28:0,81,5354	0/0:26,0:26:75.22:0,75,4728	0/0:7,0:7:21.06:0,21,1105	0/0:32,0:32:96.33:0,96,6599	0/0:24,0:24:69.23:0,69,4486	0/0:19,0:19:57.20:0,57,3678	0/0:15,0:15:45.15:0,45,2759	0/0:19,0:19:57.20:0,57,3741	0/0:17,0:17:51.18:0,51,3440	0/0:32,0:32:90.27:0,90,5792	0/0:28,0:28:81.28:0,81,5590	0/0:19,0:19:57.15:0,57,3265
chr10	84753300	.	T	TC	1059.97	PASS	AB=0.804;AC=10;AF=0.179;AN=56;BaseQRankSum=5.057;DP=506;FS=9.880;HRun=0;HaplotypeScore=72.6262;InbreedingCoeff=0.5326;MQ=58.08;MQ0=8;MQRankSum=-0.139;QD=9.22;ReadPosRankSum=-0.310;VQSLOD=2.8005;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:69.17:0,69,891	0/0:9,0:9:27.08:0,27,362	0/1:17,0:7:15.27:15,0,116	0/0:13,0:5:10.93:0,11,93	0/0:31,0:31:84.15:0,84,1083	0/0:22,0:22:47.74:0,48,365	0/0:5,0:5:11.63:0,12,71	0/1:19,3:16:37.45:139,0,37	0/0:11,0:11:33.10:0,33,445	0/0:27,0:27:78.24:0,78,1047	0/0:22,0:22:66.11:0,66,850	0/0:15,0:15:33.10:0,33,443	0/0:8,0:8:21.02:0,21,270	0/0:13,0:13:30.07:0,30,385	0/0:17,0:17:48.15:0,48,652	0/0:9,0:8:21.07:0,21,293	0/0:36,0:36:51.02:0,51,848	0/0:32,0:32:90.25:0,90,1191	0/1:9,11:15:14.96:191,0,15	1/1:4,17:21:38.58:366,39,0	1/1:0,6:6:11.96:157,12,0	0/1:5,4:9:4.37:111,0,4	0/0:7,0:7:21.03:0,21,271	0/0:6,0:6:12:0,12,145	0/0:25,0:27:78.57:0,79,524	0/0:15,0:17:32.57:0,33,238	1/1:5,14:19:21.23:241,21,0	0/0:22,0:23:55.30:0,55,383
chr10	84753301	.	TC	T	2869.85	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=2.934;DP=502;FS=13.238;HRun=1;HaplotypeScore=61.0253;InbreedingCoeff=0.9423;MQ=57.92;MQ0=9;MQRankSum=-5.169;QD=14.79;ReadPosRankSum=-7.412;VQSLOD=0.0006;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:38,1:38:8.07:0,8,159	0/0:9,0:9:27.03:0,27,268	0/0:16,0:7:17.51:0,18,118	0/0:13,0:5:1.83:0,2,32	0/0:31,0:31:54.54:0,55,660	1/1:22,0:22:47.78:381,48,0	1/1:5,1:5:10.17:72,10,0	1/1:21,0:15:34.60:194,35,0	0/0:11,0:11:32.90:0,33,295	0/0:26,0:26:74.41:0,74,737	0/0:21,0:21:60.97:0,61,583	0/0:15,0:14:35.89:0,36,331	0/0:7,0:7:19.85:0,20,188	0/0:12,0:12:26.98:0,27,266	0/0:17,0:17:46.81:0,47,452	0/0:9,0:8:20.98:0,21,205	0/0:36,0:36:48.14:0,48,511	0/0:31,1:32:76.87:0,77,649	1/1:21,0:16:40.19:279,40,0	1/1:22,0:22:53.65:328,54,0	1/1:6,0:6:14.93:114,15,0	1/1:9,0:9:17.72:127,18,0	0/0:7,0:7:20.94:0,21,194	0/0:6,0:6:11.96:0,12,113	1/1:25,2:27:78.88:632,79,0	1/1:17,0:17:35.97:285,36,0	1/1:19,0:18:27.55:173,28,0	1/1:23,1:23:56.94:505,57,0
chr10	84754764	.	T	TA	1378.48	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.489;DP=658;FS=4.407;HRun=1;HaplotypeScore=61.5976;InbreedingCoeff=0.9949;MQ=79.99;MQ0=0;MQRankSum=-3.756;QD=36.28;ReadPosRankSum=2.300;VQSLOD=4.1381;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:38:99:1473,99,0	0/0:8,0:8:21.07:0,21,272	0/0:26,0:26:75.23:0,75,944	0/0:19,0:19:51.15:0,51,637	0/0:18,0:18:51.15:0,51,648	0/0:19,0:19:57.19:0,57,740	0/0:22,0:22:66.21:0,66,855	0/0:28,0:28:84.26:0,84,1074	0/0:24,0:24:72.21:0,72,908	0/0:21,0:21:63.20:0,63,818	0/0:17,0:17:48.16:0,48,619	0/0:24,0:24:72.23:0,72,935	0/0:24,0:24:72.23:0,72,934	0/0:26,0:26:75.24:0,75,973	0/0:35,0:35:99:0,105,1358	0/0:21,0:21:63.20:0,63,817	0/0:38,0:38:99:0,114,1478	0/0:20,0:20:60.20:0,60,779	0/0:21,0:21:57.18:0,57,739	0/0:31,0:31:87.28:0,87,1130	0/0:31,0:31:93.30:0,93,1207	0/0:22,0:22:66.21:0,66,856	0/0:17,0:17:48.16:0,48,621	0/0:24,0:24:72.22:0,72,920	0/0:9,0:9:27.09:0,27,351	0/0:33,0:33:96.29:0,96,1209	0/0:28,0:28:78.25:0,78,1012	0/0:14,0:14:42.10:0,42,527
chr10	84757925	.	CT	C	1813.73	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-2.482;DP=254;FS=28.724;HRun=1;HaplotypeScore=33.5646;InbreedingCoeff=0.8712;MQ=82.29;MQ0=2;MQRankSum=-0.611;QD=18.70;ReadPosRankSum=-2.296;VQSLOD=1.7003;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,1:12:26.78:0,27,202	0/0:1,0:1:2.99:0,3,24	0/0:34,0:19:30.07:0,30,274	0/0:17,0:12:2.27:0,2,133	0/0:3,0:3:8.96:0,9,69	1/1:8,0:8:23.98:204,24,0	1/1:11,0:11:23.97:203,24,0	1/1:0,7:7:20.92:166,21,0	0/0:7,0:7:20.91:0,21,164	0/0:3,0:3:5.97:0,6,47	0/0:6,0:6:14.94:0,15,121	0/0:6,0:6:8.97:0,9,82	0/0:11,0:11:23.68:0,24,174	0/0:6,0:6:11.79:0,12,106	0/0:9,0:9:20.80:0,21,163	0/0:9,0:9:23.65:0,24,208	0/0:15,0:15:35.83:0,36,278	0/0:7,0:7:17.81:0,18,136	1/1:7,0:7:20.95:174,21,0	1/1:7,0:7:17.73:153,18,0	1/1:14,0:14:23.98:206,24,0	1/1:8,0:8:20.96:177,21,0	0/0:6,0:6:8.98:0,9,73	0/0:4,0:4:5.98:0,6,48	1/1:13,0:13:27.90:241,28,0	1/1:10,0:10:29.89:240,30,0	1/1:9,0:9:23.80:186,24,0	1/1:3,0:3:9:77,9,0
chr10	84758705	.	ACTCCACCTGC	A	2899.51	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.475;DP=593;FS=15.980;HRun=0;HaplotypeScore=174.2413;InbreedingCoeff=0.9973;MQ=66.02;MQ0=0;MQRankSum=-9.422;QD=64.43;ReadPosRankSum=1.900;VQSLOD=2.7482;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:42.10:1242,42,0	0/0:11,0:11:30.09:0,30,1340	0/0:32,0:31:87.30:0,87,3958	0/0:23,0:22:57.20:0,57,2500	0/0:22,0:22:51.16:0,51,2012	0/0:16,0:16:45.02:0,45,1989	1/1:2,19:21:54.19:1779,54,0	0/0:19,0:19:51.17:0,51,1949	0/0:27,0:27:78.27:0,78,3891	0/0:23,0:23:60.19:0,60,2738	0/0:18,0:18:49.41:0,49,2260	0/0:18,0:18:54.19:0,54,2712	0/0:22,0:22:63.22:0,63,3054	0/0:24,0:24:70.77:0,71,2951	0/0:48,0:48:99:0,141,6833	0/0:26,0:26:72.25:0,72,3704	0/0:24,0:24:66.23:0,66,2949	0/0:24,0:24:66.23:0,66,3334	0/0:11,0:11:30.09:0,30,1153	0/0:19,0:19:51.18:0,51,2076	0/0:30,0:30:87.28:0,87,3934	0/0:13,0:13:39.13:0,39,1756	0/0:9,0:9:27.07:0,27,1086	0/0:25,0:25:66.23:0,66,3306	0/0:8,0:8:24.08:0,24,1198	0/0:20,0:20:57.19:0,57,2268	0/0:26,0:26:75.26:0,75,3638	0/0:9,0:9:27.09:0,27,1412
chr10	84760546	.	CTGA	C	3832.27	PASS	AB=0.517;AC=7;AF=0.125;AN=56;BaseQRankSum=13.493;DP=747;FS=1.486;HRun=0;HaplotypeScore=118.2593;InbreedingCoeff=0.7989;MQ=85.86;MQ0=0;MQRankSum=-12.370;QD=48.51;ReadPosRankSum=1.488;VQSLOD=5.5810;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,2734	0/0:9,0:9:27.09:0,27,666	0/0:25,0:25:72.24:0,72,1635	0/0:26,0:26:75.26:0,75,1697	0/0:34,0:34:99:0,102,2365	1/1:0,28:28:72.25:1329,72,0	0/0:17,0:17:51.18:0,51,1257	0/0:31,0:31:93.30:0,93,2141	0/0:27,0:27:81.24:0,81,1844	0/0:46,0:46:99:0,138,3273	0/0:29,0:29:87.28:0,87,2055	0/0:37,0:37:99:0,111,2631	0/0:39,0:39:99:0,117,2758	0/0:27,0:27:81.26:0,81,1909	0/0:40,0:40:99:0,120,2943	0/0:38,0:37:99:0,114,2726	0/0:18,0:18:54.16:0,54,1274	0/0:15,0:15:45.10:0,45,1006	0/0:21,0:21:63.22:0,63,1540	0/0:27,0:27:81.22:0,81,1738	0/0:28,0:28:84.27:0,84,2013	0/0:27,0:27:81.28:0,81,1972	0/0:16,0:16:45.15:0,45,1103	0/0:24,0:24:72.21:0,72,1668	1/1:0,19:19:54.19:997,54,0	0/1:2,28:30:56.62:1396,0,57	0/0:30,0:29:90.31:0,90,2209	1/1:0,2:2:6.02:111,6,0
chr10	84761324	.	G	GT	1982.78	PASS	AB=0.809;AC=13;AF=0.232;AN=56;BaseQRankSum=-7.706;DP=484;FS=4.239;HRun=10;HaplotypeScore=50.6260;InbreedingCoeff=0.6768;MQ=75.05;MQ0=0;MQRankSum=1.781;QD=16.80;ReadPosRankSum=-2.438;VQSLOD=3.2704;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:73.89:0,74,593	0/1:6,1:7:14.01:14,0,105	0/0:14,0:14:9.71:0,10,87	0/0:11,0:11:14.31:0,14,97	0/0:25,0:25:68.90:0,69,563	0/0:21,0:21:48.39:0,48,392	0/0:18,0:19:52.95:0,53,421	1/1:6,14:23:4.29:384,4,0	0/0:8,0:8:20.97:0,21,172	0/0:22,1:23:27.91:0,28,434	0/0:16,0:16:41.92:0,42,341	0/0:10,0:10:29.97:0,30,246	0/0:13,0:14:40.99:0,41,326	0/1:6,0:6:14:14,0,105	0/0:22,0:22:53.93:0,54,443	0/0:12,0:12:32.95:0,33,271	0/0:30,0:30:80.86:0,81,661	0/0:25,0:25:53.88:0,54,440	1/1:7,8:15:30.05:303,30,0	0/1:5,21:26:7.82:518,0,8	1/1:0,11:11:24.06:256,24,0	1/1:1,16:17:42.11:447,42,0	0/0:24,0:25:61.96:0,62,497	0/0:9,0:9:26.97:0,27,222	0/0:20,0:20:47.92:0,48,394	0/0:19,0:20:49.96:0,50,398	1/1:3,10:13:21.05:224,21,0	0/0:9,0:9:26.97:0,27,222
chr10	84762274	.	CA	C	871.99	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.072;DP=661;FS=11.302;HRun=3;HaplotypeScore=68.7014;InbreedingCoeff=0.9954;MQ=80.53;MQ0=0;MQRankSum=-3.004;QD=31.14;ReadPosRankSum=0.587;VQSLOD=2.7653;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1663	0/0:8,0:8:21.07:0,21,302	0/0:16,0:16:39.03:0,39,494	0/0:19,0:19:53.49:0,53,668	0/0:27,0:27:72.23:0,72,1004	0/0:25,0:25:75.25:0,75,1078	1/1:1,27:28:78.24:967,78,0	0/0:33,0:33:90.29:0,90,1260	0/0:28,0:28:84.28:0,84,1208	0/0:25,0:25:66.22:0,66,950	0/0:17,0:17:51.16:0,51,716	0/0:20,0:20:57.19:0,57,819	0/0:23,0:23:69.23:0,69,993	0/0:28,0:28:81.27:0,81,1147	0/0:30,0:30:84.28:0,84,1209	0/0:26,0:26:75.24:0,75,1058	0/0:27,0:27:75.22:0,75,1059	0/0:15,0:14:45.13:0,45,627	0/0:20,0:20:57.19:0,57,821	0/0:24,0:24:69.12:0,69,964	0/0:31,0:31:93.28:0,93,1296	0/0:17,0:17:48.15:0,48,675	0/0:23,0:23:69.23:0,69,993	0/0:39,0:39:99:0,117,1680	0/0:19,0:19:57.16:0,57,783	0/0:25,0:25:72.23:0,72,1021	0/0:19,0:19:57.18:0,57,802	0/0:10,0:10:30.10:0,30,428
chr10	84762953	.	T	TC	2692.82	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-10.932;DP=692;FS=10.474;HRun=3;HaplotypeScore=65.5670;InbreedingCoeff=0.9916;MQ=91.73;MQ0=0;MQRankSum=-4.363;QD=32.44;ReadPosRankSum=0.431;VQSLOD=3.2012;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,46:51:99:1890,135,0	0/0:5,0:5:14.99:0,15,152	0/0:32,0:32:78.23:0,78,920	0/0:25,0:25:72.14:0,72,805	0/0:21,0:21:63.19:0,63,755	0/0:18,0:18:48.15:0,48,576	1/1:7,25:32:66.22:924,66,0	0/0:27,0:27:72.17:0,72,838	0/0:22,0:22:54.16:0,54,648	0/0:32,0:32:81.17:0,81,938	0/0:20,0:20:48.15:0,48,576	0/0:22,0:22:57.17:0,57,683	0/0:23,0:23:66.20:0,66,792	0/0:16,0:16:39.12:0,39,468	0/0:20,0:20:51.15:0,51,611	0/0:24,0:24:69.19:0,69,813	0/0:30,0:30:87.27:0,87,1044	0/0:27,0:27:75.23:0,75,898	0/0:21,0:21:60.17:0,60,708	0/0:29,0:29:87.25:0,87,1032	0/0:43,0:43:99:0,126,1512	0/0:17,0:17:48.14:0,48,565	0/0:14,0:14:39.12:0,39,467	0/0:34,0:34:90.19:0,90,1048	0/0:21,0:21:57.17:0,57,684	0/0:27,0:27:78.24:0,78,936	0/0:26,0:26:78.24:0,78,935	0/0:13,0:13:36.11:0,36,432
chr10	84763653	.	AAAT	A	103.46	PASS	AB=0.600;AC=1;AF=0.018;AN=56;BaseQRankSum=3.426;DP=670;FS=12.052;HRun=0;HaplotypeScore=94.6810;InbreedingCoeff=-0.0182;MQ=78.98;MQ0=0;MQRankSum=-1.785;QD=17.24;ReadPosRankSum=0.760;VQSLOD=2.7537;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.32:0,93,2052	0/0:11,0:11:30.10:0,30,665	0/0:24,0:24:47.62:0,48,1115	0/0:18,0:19:51.14:0,51,963	0/0:28,0:28:84.29:0,84,1874	0/0:34,0:34:93.29:0,93,1993	0/0:23,0:23:57.18:0,57,1218	0/0:26,0:26:63.21:0,63,1357	0/0:22,0:22:60.21:0,60,1340	0/0:29,0:29:81.28:0,81,1798	0/0:21,0:21:63.22:0,63,1406	0/0:27,0:27:81.28:0,81,1810	0/0:27,0:27:75.26:0,75,1659	0/0:26,0:26:75.26:0,75,1675	0/0:30,0:30:78.23:0,78,1697	0/0:26,0:26:63.22:0,63,1407	0/0:25,0:25:75.26:0,75,1674	0/0:20,0:20:57.20:0,57,1273	0/0:15,0:15:42.14:0,42,939	0/0:24,0:24:69.24:0,69,1519	0/0:36,0:36:99:0,105,2284	0/0:19,0:19:54.19:0,54,1179	0/0:29,0:29:87.30:0,87,1892	0/0:24,0:24:66.20:0,66,1372	0/0:24,0:24:69.24:0,69,1532	0/0:26,0:26:75.26:0,75,1657	0/0:16,0:16:48.16:0,48,1056	0/1:2,4:6:99:178,0,116
chr10	84765286	.	AG	A	909.45	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.228;DP=720;FS=4.844;HRun=3;HaplotypeScore=69.2654;InbreedingCoeff=0.9988;MQ=86.92;MQ0=0;MQRankSum=-0.895;QD=33.68;ReadPosRankSum=-2.661;VQSLOD=3.0067;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,163,2291	0/0:11,0:11:30.10:0,30,430	0/0:26,0:26:69.22:0,69,941	0/0:23,0:23:52.97:0,53,658	0/0:34,0:34:99:0,102,1466	0/0:22,0:22:66.22:0,66,950	1/1:0,27:27:81.25:1004,81,0	0/0:35,0:35:99:0,99,1408	0/0:26,0:26:78.24:0,78,1074	0/0:27,0:27:78.25:0,78,1107	0/0:21,0:21:57.19:0,57,820	0/0:32,0:32:93.29:0,93,1302	0/0:27,0:27:81.25:0,81,1139	0/0:17,0:17:48.16:0,48,689	0/0:36,0:36:99:0,108,1537	0/0:28,0:28:81.26:0,81,1148	0/0:31,0:31:93.31:0,93,1339	0/0:17,0:17:51.17:0,51,734	0/0:23,0:23:63.20:0,63,890	0/0:28,0:28:78.26:0,78,1123	0/0:31,0:31:90.28:0,90,1259	0/0:22,0:22:66.22:0,66,950	0/0:18,0:18:54.18:0,54,777	0/0:27,0:27:81.27:0,81,1163	0/0:12,0:12:36.12:0,36,517	0/0:26,0:26:78.25:0,78,1105	0/0:25,0:24:72.24:0,72,1037	0/0:10,0:10:30.10:0,30,428
chr10	84766939	.	CT	C	626.60	PASS	AB=0.809;AC=10;AF=0.179;AN=56;BaseQRankSum=-1.628;DP=597;FS=2.456;HRun=14;HaplotypeScore=84.4479;InbreedingCoeff=0.3935;MQ=49.43;MQ0=17;MQRankSum=3.649;QD=4.38;ReadPosRankSum=3.099;VQSLOD=1.8693;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,1:35:35.91:0,36,432	0/1:4,2:6:26.15:26,0,69	0/0:17,0:6:0.47:0,0,1	0/0:12,0:7:7.82:0,8,58	0/0:31,1:33:19.16:0,19,426	0/1:7,15:22:11.43:241,0,11	0/0:10,0:10:23.90:0,24,193	0/0:24,0:29:36.74:0,37,218	0/0:18,0:17:19.87:0,20,163	0/0:23,0:20:33.01:0,33,297	0/0:22,0:23:28.14:0,28,224	0/0:22,0:21:41.51:0,42,315	0/0:18,0:18:8.91:0,9,131	0/0:16,1:19:22.80:0,23,195	0/0:21,1:21:22.61:0,23,322	0/1:20,1:22:20.86:21,0,215	0/1:43,3:44:5.11:5,0,538	0/0:23,1:27:1.30:0,1,270	0/0:14,0:15:30.08:0,30,185	0/0:6,0:18:22.25:0,22,132	0/0:9,0:12:9.58:0,10,50	0/0:5,0:20:18.66:0,19,108	0/0:19,0:18:29.69:0,30,241	0/0:20,1:21:5.93:0,6,187	1/1:4,12:16:7.56:145,8,0	1/1:4,9:16:25.78:170,26,0	0/0:17,0:22:30.20:0,30,164	1/1:3,10:14:3.93:163,4,0
chr10	84768015	.	A	AAC	193.07	PASS	AB=0.945;AC=9;AF=0.188;AN=48;BaseQRankSum=-0.228;DP=487;FS=28.013;HRun=0;HaplotypeScore=85.2860;InbreedingCoeff=-0.0699;MQ=62.89;MQ0=16;MQRankSum=-0.068;QD=1.29;ReadPosRankSum=1.773;VQSLOD=-0.1052;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:37,1:37:16.82:17,0,202	0/1:6,0:5:0:0,0,0	./.	./.	0/0:15,0:23:8.80:0,9,65	0/0:16,0:16:11.83:0,12,88	./.	1/1:21,0:20:0.47:1,0,0	0/0:14,0:14:3.01:0,3,31	0/1:18,0:17:33.44:135,0,33	0/1:7,0:5:10.10:10,0,54	0/0:14,0:14:11.24:0,11,102	0/0:13,0:11:12.02:0,12,121	0/0:19,0:19:18.02:0,18,176	0/0:18,0:16:26.56:0,27,238	0/0:10,0:10:6:0,6,51	0/1:22,9:32:70.19:70,0,80	0/0:16,0:15:14.60:0,15,118	0/1:13,0:13:15.65:16,0,20	0/0:3,0:3:5.97:0,6,51	0/0:31,0:31:20.53:0,21,165	0/0:20,0:19:20.83:0,21,170	0/0:7,0:7:9.43:0,9,81	0/0:44,0:44:47.08:0,47,409	0/0:11,0:11:8.69:0,9,60	0/0:21,0:21:0.36:0,0,28	0/1:12,1:14:49.96:58,0,50	./.
chr10	84768705	.	CA	C	7420.18	PASS	AB=0.545;AC=33;AF=0.589;AN=56;BaseQRankSum=9.064;DP=537;FS=4.046;HRun=9;HaplotypeScore=59.7078;InbreedingCoeff=0.9367;MQ=71.22;MQ0=1;MQRankSum=-2.493;QD=23.33;ReadPosRankSum=-1.124;VQSLOD=5.3700;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:84.04:769,84,0	1/1:1,5:6:15.01:137,15,0	0/0:9,0:8:20.73:0,21,209	0/0:14,0:12:22.73:0,23,285	0/0:28,1:29:47.76:0,48,804	1/1:1,17:18:51.03:467,51,0	0/1:2,10:12:4.60:217,0,5	1/1:1,27:28:81.03:737,81,0	0/0:26,0:26:75.18:0,75,836	1/1:3,21:23:66.03:601,66,0	1/1:1,14:15:39.02:357,39,0	0/0:18,0:18:48.14:0,48,554	0/0:23,0:23:54.13:0,54,603	0/0:21,0:21:63.18:0,63,718	0/0:26,0:28:75.06:0,75,845	1/1:3,18:21:54.02:494,54,0	1/1:4,24:28:66.03:604,66,0	0/0:19,0:19:54.16:0,54,623	1/1:2,16:18:48:439,48,0	1/1:3,10:14:32.05:281,32,0	1/1:3,4:7:11.99:110,12,0	1/1:0,13:13:39.02:357,39,0	0/0:19,0:19:54.16:0,54,623	0/0:13,0:13:36.11:0,36,415	1/1:3,6:9:21.01:192,21,0	1/1:6,14:20:45.01:412,45,0	1/1:4,34:40:99:890,100,0	1/1:0,13:13:39.02:357,39,0
chr10	84768746	.	TA	T	1464.82	PASS	AB=0.758;AC=8;AF=0.143;AN=56;BaseQRankSum=7.278;DP=611;FS=9.265;HRun=11;HaplotypeScore=76.8463;InbreedingCoeff=0.7169;MQ=64.60;MQ0=3;MQRankSum=-1.701;QD=13.82;ReadPosRankSum=0.534;VQSLOD=3.2817;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:71.73:0,72,710	0/0:8,0:8:15.04:0,15,160	0/1:19,1:12:9.15:9,0,121	0/0:14,0:9:12.01:0,12,115	0/0:36,0:37:74.60:0,75,961	0/1:5,17:22:5.27:364,0,5	0/0:8,0:8:18.05:0,18,192	0/0:27,0:27:66.14:0,66,684	0/0:25,0:25:69.17:0,69,736	0/0:31,1:32:65.56:0,66,884	0/0:19,0:19:42.09:0,42,439	0/0:26,0:27:68.98:0,69,708	0/0:19,0:20:30.82:0,31,471	0/0:22,0:22:51.13:0,51,542	0/0:25,0:25:54.13:0,54,568	0/0:19,1:20:32.52:0,33,551	0/0:25,0:26:40.74:0,41,599	0/0:18,0:19:45.11:0,45,475	0/0:28,1:29:15.55:0,16,524	0/0:18,1:19:45.58:0,46,480	0/0:4,0:4:12.03:0,12,128	0/0:22,1:22:29.49:0,29,504	0/0:16,1:18:11.28:0,11,310	0/0:18,1:19:24.28:0,24,432	1/1:1,19:20:50.94:419,51,0	1/1:5,23:28:10.92:502,11,0	0/0:33,0:34:80.97:0,81,824	1/1:4,12:16:38.93:320,39,0
chr10	84770476	.	A	AC	1266.30	PASS	AB=0.671;AC=7;AF=0.125;AN=56;BaseQRankSum=5.917;DP=625;FS=35.277;HRun=7;HaplotypeScore=82.6795;InbreedingCoeff=0.3762;MQ=79.76;MQ0=1;MQRankSum=-0.180;QD=10.30;ReadPosRankSum=-3.161;VQSLOD=-0.4778;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.03:0,72,677	0/0:1,0:1:3:0,3,29	0/0:35,0:30:75.64:0,76,687	0/0:23,0:20:38.40:0,38,344	0/0:26,0:26:69.08:0,69,658	0/0:28,0:28:76.85:0,77,709	0/0:27,0:27:66.10:0,66,636	0/1:12,9:21:1.67:186,0,2	0/0:21,0:21:60.10:0,60,578	0/0:25,0:25:68.66:0,69,685	0/0:18,1:19:18.28:0,18,455	0/0:26,0:26:69.10:0,69,665	0/0:22,0:22:60.09:0,60,579	0/0:19,0:19:48.06:0,48,463	0/0:30,0:30:81.12:0,81,781	0/0:23,0:23:60.09:0,60,577	0/0:22,0:22:63.10:0,63,608	0/0:23,0:23:49.67:0,50,618	0/1:14,3:17:9.63:130,0,10	0/1:4,13:17:1.31:255,0,1	0/1:8,14:22:4.10:91,0,4	1/1:8,11:19:4.29:387,4,0	0/0:19,0:19:54.09:0,54,520	0/0:39,0:39:96.09:0,96,912	0/0:18,0:18:50.97:0,51,472	0/0:18,0:18:42.05:0,42,405	0/1:11,16:27:23.71:346,0,24	0/0:10,0:10:30.05:0,30,288
chr10	84771132	.	T	TAAAACAAAAC	13458.57	PASS	AB=0.692;AC=19;AF=0.339;AN=56;BaseQRankSum=-5.343;DP=448;FS=0.444;HRun=0;HaplotypeScore=129.3875;InbreedingCoeff=0.8548;MQ=73.87;MQ0=3;MQRankSum=-10.372;QD=75.19;ReadPosRankSum=-1.225;VQSLOD=4.0862;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.22:0,69,2038	0/0:9,0:9:24.08:0,24,704	0/0:33,0:24:32.46:0,32,730	0/0:42,0:24:31.01:0,31,692	0/0:25,0:25:57.18:0,57,1566	1/1:10,9:20:27.09:1326,27,0	0/0:3,0:3:9.02:0,9,211	1/1:29,8:37:66.19:2386,66,0	0/0:7,0:7:21.07:0,21,627	0/0:17,0:17:45.15:0,45,1287	0/0:11,0:11:30.09:0,30,836	0/0:3,0:3:9.03:0,9,279	0/0:6,0:6:15.05:0,15,405	0/0:10,0:10:30.10:0,30,847	0/0:13,0:13:30.09:0,30,794	0/0:13,0:13:33.11:0,33,899	0/0:14,0:14:33.11:0,33,1024	0/0:24,0:24:41.64:0,42,1499	1/1:14,8:28:54.13:1820,54,0	1/1:2,3:6:6.02:305,6,0	1/1:3,3:6:15.05:487,15,0	1/1:3,1:4:9.03:364,9,0	0/0:7,0:7:21.06:0,21,535	0/0:3,0:3:6.02:0,6,143	1/1:11,10:22:36.12:1828,36,0	0/1:15,9:27:99:1913,0,131	1/1:2,6:8:21.07:967,21,0	1/1:5,12:18:42.14:2065,42,0
chr10	84771512	.	TAAA	T	1720.49	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=2.008;DP=424;FS=6.433;HRun=14;HaplotypeScore=68.5822;InbreedingCoeff=0.9634;MQ=68.82;MQ0=8;MQRankSum=-4.978;QD=21.24;ReadPosRankSum=-1.382;VQSLOD=2.2039;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:31:75.21:0,75,1330	0/0:1,0:5:11.95:0,12,92	0/0:34,0:14:27.08:0,27,345	0/0:25,0:10:6.45:0,6,54	0/0:21,0:21:54.11:0,54,915	0/0:13,0:14:33.06:0,33,556	0/0:11,0:13:36.11:0,36,632	1/1:10,14:24:38.91:444,39,0	0/0:9,0:9:24.08:0,24,452	0/0:4,0:16:37.13:0,37,297	0/0:2,0:14:35.85:0,36,274	0/0:6,0:8:21.07:0,21,355	0/0:7,0:7:18.06:0,18,339	0/0:8,0:9:21.07:0,21,359	0/0:11,0:13:39.11:0,39,641	0/0:6,0:13:22.21:0,22,204	0/0:3,0:16:35.87:0,36,276	0/0:24,0:26:69.21:0,69,1157	1/1:3,13:16:42.08:489,42,0	1/1:3,8:11:21.03:245,21,0	1/1:2,6:8:14.12:173,14,0	1/1:1,11:12:27.02:312,27,0	0/0:13,0:13:30.10:0,30,551	0/0:10,0:10:24.08:0,24,452	0/0:14,0:16:45.15:0,45,801	0/0:13,0:17:42.08:0,42,676	1/1:3,7:10:21.04:243,21,0	0/0:11,0:11:30.10:0,30,542
chr10	84771616	.	GA	G	2612.83	PASS	AB=0.901;AC=19;AF=0.339;AN=56;BaseQRankSum=6.360;DP=475;FS=0.399;HRun=12;HaplotypeScore=51.1594;InbreedingCoeff=0.7576;MQ=60.38;MQ0=4;MQRankSum=-1.296;QD=13.13;ReadPosRankSum=0.539;VQSLOD=3.4854;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,26:35:71.70:557,72,0	0/0:5,0:5:9:0,9,85	0/1:12,1:7:8.43:8,0,76	0/0:14,0:5:10.64:0,11,60	0/0:16,0:16:34.29:0,34,329	0/0:13,0:13:33.06:0,33,329	1/1:3,12:15:23.91:186,24,0	1/1:6,21:27:64.41:473,64,0	0/0:19,0:19:42.05:0,42,412	0/0:17,0:17:48.10:0,48,486	0/0:12,1:15:3.57:0,4,182	0/1:8,1:9:1.53:2,0,162	0/0:13,0:13:30.06:0,30,304	0/0:12,0:13:26.82:0,27,245	0/0:18,1:19:20.35:0,20,361	0/0:15,0:15:19.83:0,20,367	0/0:33,2:36:43.57:0,44,764	0/0:18,0:18:39.02:0,39,378	1/1:4,20:24:33.80:435,34,0	1/1:2,15:17:38.81:302,39,0	1/1:1,6:7:14.93:116,15,0	1/1:2,19:21:50.78:395,51,0	0/1:11,2:14:19.59:20,0,170	0/0:11,0:10:24.05:0,24,243	0/0:14,1:15:15.76:0,16,320	0/0:21,1:22:24.86:0,25,434	1/1:2,14:16:41.83:324,42,0	0/0:15,0:14:33.07:0,33,335
chr10	84772340	.	G	GAC	1421.91	PASS	AB=0.622;AC=7;AF=0.125;AN=56;BaseQRankSum=-2.272;DP=683;FS=3.161;HRun=0;HaplotypeScore=110.2464;InbreedingCoeff=0.7912;MQ=59.66;MQ0=21;MQRankSum=1.081;QD=18.00;ReadPosRankSum=1.437;VQSLOD=3.9040;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:42:39.12:0,39,467	0/0:9,0:9:12.04:0,12,145	0/0:39,0:19:9.01:0,9,91	0/0:48,0:30:32.98:0,33,361	0/0:25,0:25:41.74:0,42,474	0/1:11,17:27:48.71:266,0,49	0/0:15,0:16:18.04:0,18,205	0/0:25,0:27:59.96:0,60,676	0/0:18,0:18:45.12:0,45,530	0/0:34,0:31:68.87:0,69,806	0/0:14,0:15:15.02:0,15,157	0/0:20,0:19:36.57:0,37,426	0/0:14,0:14:23.81:0,24,262	0/0:24,0:25:56.96:0,57,625	0/0:24,0:24:57.15:0,57,678	0/0:19,0:21:35.76:0,36,378	0/0:28,0:28:54.11:0,54,631	0/0:26,0:24:54.61:0,55,652	0/0:18,0:18:33.99:0,34,400	0/0:29,0:28:40.02:0,40,435	0/0:27,0:24:26.98:0,27,325	0/0:19,0:17:14.72:0,15,156	0/0:15,0:15:27.07:0,27,315	0/0:39,0:38:74.86:0,75,836	1/1:16,6:21:26.12:381,26,0	1/1:2,15:18:17.22:682,17,0	0/0:19,0:19:29.91:0,30,326	1/1:7,4:11:15.05:238,15,0
chr10	84772360	.	GAC	G	1471.30	PASS	AB=0.959;AC=26;AF=0.500;AN=52;BaseQRankSum=3.290;DP=657;FS=1.133;HRun=0;HaplotypeScore=123.0309;InbreedingCoeff=0.3339;MQ=54.01;MQ0=31;MQRankSum=0.680;QD=4.12;ReadPosRankSum=1.273;VQSLOD=2.7351;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,21:37:14.87:148,15,0	1/1:2,6:8:8.70:78,9,0	./.	./.	0/0:17,3:20:23.85:0,24,285	0/0:27,0:27:7.38:0,7,76	1/1:10,0:16:2.22:7,2,0	0/0:20,0:33:14.28:0,14,71	0/1:19,3:22:27.94:28,0,390	1/1:27,1:26:44.26:428,44,0	1/1:2,12:15:8.20:99,8,0	0/1:20,0:20:50.38:50,0,365	0/1:8,0:8:16.80:17,0,123	0/0:24,0:25:30.08:0,30,409	0/1:23,0:23:70.60:71,0,371	1/1:7,14:21:15.04:167,15,0	1/1:12,22:35:35.93:383,36,0	0/1:28,0:26:34.08:34,0,323	0/0:12,0:11:1.82:0,2,5	1/1:9,0:24:12.34:49,12,0	0/0:34,0:27:2.76:0,3,30	1/1:7,0:18:1.69:15,2,0	0/0:12,2:14:6.89:0,7,187	0/0:37,6:42:53.74:0,54,1183	0/0:11,0:25:2.32:0,2,12	0/1:23,1:23:15.78:16,0,82	1/1:5,0:16:11.53:57,12,0	0/0:12,0:13:7.61:0,8,50
chr10	84775825	.	A	AAGAC	11266.58	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-7.550;DP=713;FS=10.030;HRun=0;HaplotypeScore=124.4192;InbreedingCoeff=0.9944;MQ=75.15;MQ0=0;MQRankSum=-2.010;QD=41.73;ReadPosRankSum=2.001;VQSLOD=5.2084;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:75.26:0,75,1257	0/0:13,0:13:27.09:0,27,450	0/0:22,0:22:39.05:0,39,562	0/0:23,0:22:14.48:0,14,366	0/0:21,0:20:45.15:0,45,750	1/1:3,26:29:49.93:1316,50,0	0/0:18,0:18:42.14:0,42,700	1/1:11,15:28:45.12:936,45,0	0/0:22,0:22:54.17:0,54,875	0/0:31,0:31:69.22:0,69,1116	0/0:28,0:28:63.20:0,63,1029	0/0:21,0:21:54.15:0,54,873	0/0:25,0:25:60.20:0,60,1002	0/0:12,0:12:27.09:0,27,451	0/0:38,0:38:90.29:0,90,1480	0/0:32,0:32:81.27:0,81,1328	0/0:36,0:36:78.27:0,78,1297	0/0:11,0:11:27.05:0,27,419	1/1:10,14:26:48.12:979,48,0	1/1:9,34:44:78.27:1880,78,0	1/1:0,10:10:18.06:445,18,0	1/1:9,15:24:36.12:890,36,0	0/0:36,0:36:90.31:0,90,1489	0/0:22,0:22:60.20:0,60,991	1/1:13,9:22:45.15:962,45,0	1/1:10,27:37:81.23:1932,81,0	1/1:9,31:40:60.18:1483,60,0	1/1:4,6:10:18.06:445,18,0
chr10	84775901	.	G	GGA	4934.29	PASS	AB=0.758;AC=15;AF=0.268;AN=56;BaseQRankSum=8.008;DP=733;FS=7.199;HRun=0;HaplotypeScore=123.1710;InbreedingCoeff=0.3570;MQ=68.92;MQ0=4;MQRankSum=-0.191;QD=17.31;ReadPosRankSum=-0.680;VQSLOD=4.5786;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:32:24.24:0,24,409	0/0:7,0:7:15.04:0,15,176	0/1:37,0:27:13:13,0,151	0/0:50,0:25:10.84:0,11,104	0/0:21,0:23:47.85:0,48,508	0/1:11,5:17:22.22:274,0,22	0/0:11,0:11:24.06:0,24,271	1/1:15,11:26:27.07:397,27,0	0/0:18,0:19:35.90:0,36,377	0/0:18,0:20:15.23:0,15,272	0/0:22,0:24:44.55:0,45,481	0/0:22,0:27:41.68:0,42,438	0/0:40,0:41:71.99:0,72,781	0/0:20,0:22:50.80:0,51,546	0/0:29,0:30:57.40:0,57,598	0/0:25,0:27:56.94:0,57,603	0/0:29,0:30:53.98:0,54,601	0/0:15,0:19:38.86:0,39,395	1/1:15,1:16:12.03:156,12,0	0/1:26,8:34:59.01:542,0,59	1/1:26,14:42:7.79:919,8,0	1/1:8,8:16:26.56:397,27,0	0/0:31,0:32:23.41:0,23,449	0/0:31,0:33:70.23:0,70,762	0/1:7,15:22:15.35:524,0,15	0/1:15,10:25:27.97:630,0,28	0/1:17,16:32:6.97:823,0,7	0/1:9,5:14:20.06:257,0,20
chr10	84778636	.	C	CGT	205.09	PASS	AB=0.888;AC=9;AF=0.180;AN=50;BaseQRankSum=-3.962;DP=88;FS=0.000;HRun=0;HaplotypeScore=77.4274;InbreedingCoeff=0.1855;MQ=146.41;MQ0=0;MQRankSum=3.756;QD=5.54;ReadPosRankSum=-3.835;VQSLOD=1.6798;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:9.02:0,9,94	0/0:1,0:2:6.01:0,6,64	0/1:9,3:11:85.09:131,0,85	0/1:16,3:18:85.96:153,0,86	1/1:2,0:2:2.70:7,3,0	0/0:2,0:2:2.92:0,3,35	0/0:2,0:2:1.25:0,1,3	1/1:2,0:2:2.37:8,2,0	0/0:4,0:4:12.04:0,12,176	0/0:1,0:1:2.96:0,3,19	0/0:2,0:2:1.81:0,2,5	0/0:2,0:2:3.01:0,3,45	0/0:3,0:3:9.03:0,9,135	0/0:5,0:5:5.35:0,5,54	0/0:8,0:8:19.91:0,20,312	0/0:7,0:7:21.05:0,21,227	./.	0/0:2,0:2:5.65:0,6,32	0/0:1,0:1:2.92:0,3,17	1/1:1,0:1:0.89:2,1,0	0/0:1,0:1:2.37:0,2,8	./.	0/1:1,0:1:0:0,0,0	0/0:1,0:1:3.01:0,3,45	./.	0/0:1,0:1:0.47:0,0,1	0/0:2,0:2:2.37:0,2,18	0/0:1,0:1:3.01:0,3,41
chr10	84778641	.	AG	A	316.41	PASS	AB=0.764;AC=16;AF=0.444;AN=36;BaseQRankSum=1.506;DP=77;FS=4.756;HRun=6;HaplotypeScore=97.9523;InbreedingCoeff=0.3315;MQ=165.16;MQ0=1;MQRankSum=-3.029;QD=5.75;ReadPosRankSum=0.626;VQSLOD=-0.0368;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:9.01:87,9,0	1/1:1,1:2:6.01:56,6,0	0/1:13,0:12:1.91:2,0,83	0/1:21,1:21:18.68:19,0,118	1/1:2,0:2:1.25:3,1,0	0/0:1,0:1:2.88:0,3,15	1/1:0,1:1:2.98:21,3,0	./.	0/0:4,0:4:11.68:0,12,69	1/1:0,1:1:3:28,3,0	0/1:0,1:1:0:0,0,0	0/0:2,0:2:2.92:0,3,17	0/0:3,0:3:8.73:0,9,48	0/0:1,0:1:2.92:0,3,17	0/0:7,0:7:20.29:0,20,111	1/1:0,7:7:21.03:199,21,0	./.	0/1:1,1:2:7.11:23,0,7	./.	./.	./.	./.	./.	0/0:1,0:1:2.92:0,3,17	./.	./.	./.	0/0:1,0:1:2.88:0,3,15
chr10	84778738	.	AAAAAAAAAAAAAAAAG	A	1179.30	PASS	AB=0.828;AC=8;AF=0.148;AN=54;BaseQRankSum=5.113;DP=426;FS=8.320;HRun=0;HaplotypeScore=167.6090;InbreedingCoeff=0.3467;MQ=42.53;MQ0=35;MQRankSum=-1.004;QD=8.61;ReadPosRankSum=4.849;VQSLOD=1.8981;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:14:27.98:0,28,1501	0/0:5,0:5:12.01:0,12,512	0/1:55,0:6:15.34:15,0,69	0/1:56,0:9:3.30:3,0,184	0/0:15,0:14:29.70:0,30,1348	0/0:14,0:14:24.55:0,25,877	0/0:8,0:8:11.97:0,12,406	0/0:4,0:3:8.78:0,9,56	0/0:6,0:5:15.04:0,15,712	0/0:26,0:24:69.12:0,69,2697	0/0:23,0:20:48.12:0,48,1990	0/0:17,0:13:24.08:0,24,922	0/0:11,0:10:25.88:0,26,1152	0/0:10,0:9:27.07:0,27,1171	0/0:22,0:20:39.13:0,39,1754	0/0:14,0:13:33.83:0,34,1325	0/0:12,0:12:16.32:0,16,591	0/0:10,0:9:27.09:0,27,1146	0/1:4,2:5:49.20:190,0,49	0/1:2,7:9:11.88:510,0,12	./.	1/1:4,2:3:6.02:198,6,0	0/0:14,0:14:26.66:0,27,1634	0/0:6,0:5:2.94:0,3,57	0/0:11,0:10:24.08:0,24,890	0/0:22,0:21:54.19:0,54,1943	1/1:0,4:4:12.04:394,12,0	0/0:20,0:18:38.73:0,39,1338
chr10	84778752	.	AAGAT	A	4982.90	PASS	AB=0.989;AC=45;AF=0.804;AN=56;BaseQRankSum=-4.246;DP=457;FS=6.298;HRun=0;HaplotypeScore=100.5493;InbreedingCoeff=0.0023;MQ=48.89;MQ0=32;MQRankSum=-1.154;QD=12.40;ReadPosRankSum=-3.635;VQSLOD=3.0486;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:16:38.59:39,0,69	1/1:6,0:6:7.77:89,8,0	0/1:59,0:6:0.56:1,0,46	0/0:55,0:14:1.53:0,2,89	1/1:20,0:20:16.26:326,16,0	1/1:14,1:15:32.68:309,33,0	1/1:6,0:6:5.02:28,5,0	1/1:8,0:6:14.99:135,15,0	0/1:6,0:5:34.58:57,0,35	0/1:24,0:23:63.06:198,0,63	0/1:23,1:21:5.83:255,0,6	1/1:15,1:14:7.36:191,7,0	1/1:16,0:15:12.64:243,13,0	1/1:9,0:9:11.72:122,12,0	1/1:19,0:18:11.47:254,11,0	0/1:16,1:16:20.65:171,0,21	0/1:16,0:16:2.10:103,0,2	0/1:11,0:10:20.82:133,0,21	0/1:9,0:8:4.35:131,0,4	1/1:15,0:15:39.06:384,39,0	1/1:2,0:1:3.01:33,3,0	1/1:6,0:4:12.02:124,12,0	1/1:15,1:16:19.38:301,19,0	1/1:7,0:6:0.94:1,1,0	1/1:14,0:13:32.95:285,33,0	1/1:22,1:22:59.58:610,60,0	1/1:8,0:8:24.05:243,24,0	1/1:10,0:9:24.12:218,24,0
chr10	84778753	.	AGAT	A	5689.36	PASS	AB=0.898;AC=47;AF=0.839;AN=56;BaseQRankSum=-3.604;DP=439;FS=0.805;HRun=0;HaplotypeScore=87.5494;InbreedingCoeff=0.1993;MQ=49.71;MQ0=31;MQRankSum=0.740;QD=14.93;ReadPosRankSum=-2.149;VQSLOD=4.3309;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:15:8.06:55,0,8	1/1:4,0:6:14.03:114,14,0	0/0:58,0:6:6.75:0,7,52	0/1:52,0:14:0.49:0,0,81	1/1:18,1:20:39.87:389,40,0	1/1:11,3:14:33:345,33,0	1/1:4,0:6:8.76:57,9,0	1/1:8,0:6:17.95:154,18,0	0/1:6,0:5:2.45:55,0,2	0/1:18,1:22:29.13:295,0,29	1/1:18,2:20:12.72:309,13,0	1/1:11,0:13:21.64:202,22,0	1/1:14,0:14:27.96:312,28,0	1/1:7,1:9:25.74:205,26,0	1/1:13,3:18:33.45:281,33,0	0/1:13,0:15:2.23:217,0,2	1/1:13,1:15:5.80:131,6,0	0/1:8,2:10:2.06:190,0,2	0/1:6,0:6:4.40:118,0,4	1/1:13,0:13:38.96:353,39,0	1/1:2,0:1:3.01:33,3,0	1/1:5,0:4:11.98:111,12,0	1/1:14,2:16:40.46:360,40,0	1/1:6,0:5:0.94:1,1,0	1/1:9,2:13:32.96:287,33,0	1/1:14,8:22:59.90:614,60,0	1/1:8,0:8:23.96:217,24,0	1/1:10,0:9:26.77:282,27,0
chr10	84778755	.	AT	A	5770.11	PASS	AB=0.848;AC=53;AF=0.946;AN=56;BaseQRankSum=-2.548;DP=429;FS=0.000;HRun=1;HaplotypeScore=76.7514;InbreedingCoeff=0.1340;MQ=50.26;MQ0=28;MQRankSum=2.365;QD=13.45;ReadPosRankSum=1.147;VQSLOD=3.6925;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,3:13:18.54:171,19,0	1/1:1,5:6:14.57:142,15,0	0/1:59,0:7:9.65:10,0,34	0/1:53,0:14:16.30:16,0,75	1/1:12,8:20:44.31:439,44,0	1/1:6,8:14:32.90:372,33,0	1/1:4,2:6:8.68:70,9,0	1/1:9,0:7:13.52:49,14,0	1/1:5,1:5:11.23:74,11,0	1/1:11,10:20:6.17:395,6,0	1/1:17,6:20:41.11:310,41,0	1/1:9,6:13:23.85:239,24,0	1/1:10,5:14:38.60:344,39,0	1/1:6,3:9:26.49:233,26,0	1/1:14,4:18:39.08:289,39,0	1/1:10,5:14:17.08:257,17,0	1/1:5,9:14:15.38:172,15,0	1/1:8,2:9:26.91:269,27,0	1/1:7,0:6:1.95:34,2,0	1/1:13,0:13:30.94:122,31,0	1/1:2,0:1:2.80:13,3,0	1/1:5,0:4:10.14:43,10,0	1/1:8,7:15:41.67:454,42,0	0/1:1,5:5:0:1,0,0	1/1:6,7:13:32.73:355,33,0	1/1:17,6:22:57.27:510,57,0	1/1:8,0:8:19.83:77,20,0	1/1:6,4:9:27.01:311,27,0
chr10	84779347	.	G	GAA	1071.31	PASS	AB=0.875;AC=11;AF=0.204;AN=54;BaseQRankSum=5.851;DP=270;FS=0.000;HRun=1;HaplotypeScore=51.0107;InbreedingCoeff=0.7430;MQ=74.87;MQ0=1;MQRankSum=-0.574;QD=18.47;ReadPosRankSum=-2.513;VQSLOD=-0.0134;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:47.40:0,47,588	./.	0/0:27,0:18:3.65:0,4,275	0/0:13,0:11:5.86:0,6,209	0/0:7,0:7:9.01:0,9,94	1/1:12,0:12:31.70:378,32,0	0/0:15,0:16:32.95:0,33,370	1/1:10,0:10:8.62:32,9,0	0/0:6,0:6:11.85:0,12,109	0/0:5,0:6:12.04:0,12,151	0/0:9,0:9:15.05:0,15,199	0/0:9,0:9:21.01:0,21,258	0/0:4,0:4:12.03:0,12,149	0/0:7,0:7:18.05:0,18,238	0/0:15,0:15:35.68:0,36,425	0/0:12,0:12:30.09:0,30,399	0/0:14,0:14:38.48:0,38,471	0/0:4,0:4:3.01:0,3,41	0/0:9,0:9:20.65:0,21,222	0/0:5,0:5:8.77:0,9,121	0/1:6,0:7:3.87:4,0,6	0/0:1,0:1:0.89:0,1,2	0/0:7,0:7:9.03:0,9,124	0/0:9,0:9:27.08:0,27,338	1/1:7,0:8:12.04:159,12,0	1/1:3,9:12:26.51:319,27,0	0/0:7,0:7:21.05:0,21,264	1/1:8,0:8:23.75:343,24,0
chr10	84783059	.	TACACACACACACACACACACACACAC	T	3477.29	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.404;DP=595;FS=14.852;HRun=0;HaplotypeScore=331.4979;InbreedingCoeff=0.9023;MQ=69.11;MQ0=11;MQRankSum=-2.338;QD=28.27;ReadPosRankSum=-2.165;VQSLOD=0.7964;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:31:25.64:0,26,1175	0/0:7,0:7:9.03:0,9,587	0/0:23,0:18:12.75:0,13,523	0/0:28,0:18:18.05:0,18,667	0/0:17,0:17:33.11:0,33,3082	0/0:13,0:17:27.07:0,27,1598	0/0:13,0:13:15.01:0,15,378	1/1:17,15:31:48.01:884,48,0	0/0:19,0:19:36.12:0,36,2890	0/0:20,0:20:36.12:0,36,2064	0/0:16,0:16:23.67:0,24,2088	0/0:25,0:24:45.15:0,45,3842	0/0:23,0:23:50.97:0,51,3869	0/0:16,0:19:33.10:0,33,2942	0/0:25,0:30:66.21:0,66,5788	0/0:25,0:34:22.68:0,23,1835	0/0:14,0:17:30.10:0,30,2767	0/0:23,0:27:69.24:0,69,5447	1/1:23,3:26:27.07:963,27,0	1/1:6,7:12:12.04:682,12,0	1/1:10,19:28:9.03:318,9,0	1/1:4,5:9:9.03:428,9,0	0/0:8,0:9:18.04:0,18,1509	0/0:49,0:54:99:0,114,9434	0/0:9,0:11:21.06:0,21,947	0/0:16,0:16:33.11:0,33,2016	1/1:7,7:14:2.39:203,2,0	0/0:9,0:13:27.09:0,27,2222
chr10	84783248	.	A	ATT	5023.92	PASS	AB=0.720;AC=19;AF=0.339;AN=56;BaseQRankSum=-2.873;DP=549;FS=16.257;HRun=8;HaplotypeScore=88.4630;InbreedingCoeff=0.7730;MQ=79.91;MQ0=2;MQRankSum=-1.315;QD=20.76;ReadPosRankSum=-0.953;VQSLOD=1.9819;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.20:0,84,920	0/0:11,0:11:23.48:0,23,181	0/1:30,0:25:7.86:8,0,216	0/0:18,0:12:16.85:0,17,112	0/0:27,0:27:72.16:0,72,783	0/1:5,0:19:13.93:66,0,14	0/0:12,0:12:30.05:0,30,316	1/1:5,26:35:90.25:1292,90,0	0/0:10,0:10:27.07:0,27,301	0/0:32,0:32:85.42:0,85,584	0/0:13,0:13:29.52:0,30,211	0/0:16,0:15:39.10:0,39,435	0/0:11,0:11:27.07:0,27,301	0/0:9,0:9:24.06:0,24,267	0/0:21,0:21:57.15:0,57,636	0/0:25,0:25:63.89:0,64,393	0/0:34,0:34:93.22:0,93,578	0/0:21,0:21:60.11:0,60,644	1/1:4,12:16:36.11:539,36,0	1/1:4,23:29:71.73:1063,72,0	1/1:3,9:12:21.07:333,21,0	1/1:3,6:9:14.96:171,15,0	0/0:8,0:8:18.04:0,18,200	0/0:9,0:9:21.05:0,21,234	1/1:3,0:21:42.93:167,43,0	0/1:6,0:21:11.36:90,0,11	1/1:2,26:27:72.21:1115,72,0	1/1:0,0:21:52.28:180,52,0
chr10	84783256	.	T	TA	3687.35	PASS	AB=0.985;AC=17;AF=0.304;AN=56;BaseQRankSum=-5.434;DP=543;FS=1.581;HRun=8;HaplotypeScore=86.0716;InbreedingCoeff=0.5390;MQ=78.70;MQ0=2;MQRankSum=1.156;QD=14.40;ReadPosRankSum=3.047;VQSLOD=3.8283;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:74.93:0,75,669	1/1:4,6:10:15.04:172,15,0	0/1:26,1:21:8.35:8,0,104	0/1:23,0:17:12.26:12,0,66	0/0:26,0:26:59.97:0,60,533	0/1:16,0:16:18.54:77,0,19	0/0:10,0:10:0.46:0,0,168	0/0:32,0:32:60.17:0,60,324	0/0:9,0:9:24.01:0,24,219	1/1:5,32:37:96.21:1053,96,0	1/1:1,13:14:29.94:312,30,0	0/0:18,0:17:48:0,48,429	0/0:13,0:13:38.98:0,39,341	0/0:10,0:10:26.94:0,27,231	0/0:22,0:22:66.02:0,66,594	1/1:2,23:25:60.17:687,60,0	1/1:3,34:37:87.25:997,87,0	0/0:22,0:22:57:0,57,511	0/0:15,0:15:35.77:0,36,198	0/0:26,0:26:50.49:0,50,266	0/0:9,0:9:21.98:0,22,107	0/0:4,0:4:5.36:0,5,23	0/0:7,0:7:20.99:0,21,187	0/0:7,0:7:21.01:0,21,191	0/1:23,0:24:43.67:97,0,44	1/1:15,1:16:32.43:136,32,0	0/0:27,0:26:54.71:0,55,240	0/1:27,0:26:21.11:136,0,21
chr10	84784014	.	ATATTATTATTAT	A	937.26	PASS	AB=0.714;AC=11;AF=0.220;AN=50;BaseQRankSum=0.968;DP=279;FS=1.198;HRun=0;HaplotypeScore=95.6983;InbreedingCoeff=0.5034;MQ=75.25;MQ0=1;MQRankSum=-4.191;QD=12.84;ReadPosRankSum=0.099;VQSLOD=2.0186;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:10:18.06:0,18,699	1/1:5,2:7:6.02:207,6,0	./.	0/0:11,0:10:5.05:0,5,59	0/0:13,0:14:15.05:0,15,752	0/0:9,0:9:21.07:0,21,1130	0/0:1,0:3:3.01:0,3,36	0/0:19,0:25:36.12:0,36,846	0/0:3,0:4:3.01:0,3,157	1/1:5,1:6:3.01:103,3,0	1/1:6,5:11:9.03:309,9,0	0/0:9,0:9:12.04:0,12,484	0/0:7,0:8:9.03:0,9,434	0/0:8,0:8:3.01:0,3,175	0/0:5,0:5:9.01:0,9,374	1/1:6,5:11:6.02:207,6,0	1/1:15,8:23:9.03:239,9,0	0/0:18,0:18:36.12:0,36,1630	0/0:12,0:15:12.04:0,12,326	0/0:12,0:18:24.08:0,24,656	0/0:4,0:5:3.01:0,3,97	./.	./.	0/0:1,0:2:3.01:0,3,157	0/0:9,0:11:6.02:0,6,314	0/0:3,0:6:9.03:0,9,145	0/0:7,0:10:6.02:0,6,179	0/1:9,0:15:14.47:14,0,64
chr10	84787351	.	ACTC	A	6394.64	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.306;DP=638;FS=3.828;HRun=0;HaplotypeScore=89.7965;InbreedingCoeff=0.9997;MQ=82.00;MQ0=0;MQRankSum=-4.357;QD=47.02;ReadPosRankSum=0.315;VQSLOD=6.7498;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.27:0,78,1775	0/0:12,0:12:36.12:0,36,830	0/0:24,0:24:66.23:0,66,1447	0/0:22,0:22:63:0,63,1368	0/0:29,0:29:84.29:0,84,1937	0/0:15,0:15:42.14:0,42,968	0/0:19,0:19:57.20:0,57,1297	1/1:2,22:24:66.21:1096,66,0	0/0:19,0:19:54.19:0,54,1244	0/0:27,0:27:66.23:0,66,1495	0/0:15,0:15:42.14:0,42,955	0/0:23,0:23:69.24:0,69,1590	0/0:34,0:34:99:0,99,2264	0/0:33,0:33:96.33:0,96,2214	0/0:32,0:32:93.32:0,93,2126	0/0:27,0:27:78.27:0,78,1799	0/0:24,0:24:69.22:0,69,1544	0/0:16,0:16:48.16:0,48,1106	1/1:0,18:18:54.18:914,54,0	1/1:0,24:24:72.20:1183,72,0	1/1:2,16:18:39.13:662,39,0	1/1:0,25:25:75.26:1266,75,0	0/0:16,0:15:48.16:0,48,1106	0/0:33,0:33:99:0,99,2264	0/0:20,0:20:60.18:0,60,1297	0/0:24,0:24:69.24:0,69,1592	1/1:0,27:27:78.22:1273,78,0	0/0:9,0:9:27.09:0,27,621
chr10	84788140	.	AT	A	2270.73	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.279;DP=253;FS=6.233;HRun=1;HaplotypeScore=35.0961;InbreedingCoeff=0.8700;MQ=73.65;MQ0=2;MQRankSum=0.245;QD=30.69;ReadPosRankSum=-0.553;VQSLOD=2.6926;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:18.06:251,18,0	0/0:4,0:4:12.03:0,12,156	0/0:6,0:4:8.98:0,9,91	0/0:15,0:8:5.65:0,6,50	0/0:10,0:10:19.34:0,19,60	0/0:7,0:7:21.07:0,21,287	0/0:2,0:2:6.01:0,6,73	1/1:1,29:29:84.17:995,84,0	0/0:14,0:14:42.11:0,42,550	0/0:8,0:8:24.05:0,24,288	0/0:5,0:5:15.03:0,15,184	0/0:12,0:12:35.87:0,36,426	0/0:4,0:4:12.04:0,12,175	0/0:3,0:3:9.03:0,9,131	0/0:5,0:5:15.05:0,15,219	0/0:7,0:7:21.07:0,21,292	0/0:22,0:22:66.16:0,66,906	0/0:17,0:17:45.12:0,45,619	1/1:3,11:14:37.31:430,37,0	1/1:0,4:4:12.04:155,12,0	1/1:0,2:2:6.02:77,6,0	1/1:0,5:5:15.04:171,15,0	0/0:2,0:2:6.02:0,6,88	0/0:4,0:4:12.02:0,12,115	0/0:9,0:9:26.98:0,27,327	0/0:11,0:11:32.54:0,33,270	1/1:0,12:12:30.09:380,30,0	0/0:10,0:10:29.94:0,30,332
chr10	84789865	.	AAGTCTGT	A	5341.27	PASS	AB=0.532;AC=7;AF=0.125;AN=56;BaseQRankSum=12.895;DP=732;FS=32.251;HRun=0;HaplotypeScore=166.4989;InbreedingCoeff=0.8362;MQ=83.47;MQ0=0;MQRankSum=-12.965;QD=67.61;ReadPosRankSum=1.798;VQSLOD=2.9394;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,5038	0/0:10,0:10:30.10:0,30,1187	0/0:21,0:21:48.16:0,48,1638	0/0:25,0:25:60.20:0,60,2186	0/0:23,0:23:69.24:0,69,2670	1/1:2,25:27:69.24:1770,69,0	0/0:27,0:27:72.25:0,72,2880	0/0:38,0:38:99:0,105,3979	0/0:26,0:26:75.26:0,75,2991	0/0:37,0:37:99:0,102,3848	0/0:22,0:22:63.22:0,63,2493	0/0:37,0:37:99:0,108,4264	0/0:24,0:24:72.25:0,72,2879	0/0:27,0:27:81.28:0,81,3218	0/0:38,0:38:99:0,108,4245	0/0:22,0:22:60.21:0,60,2361	0/0:20,0:20:60.21:0,60,2306	0/0:19,0:19:57.20:0,57,2196	0/0:28,0:28:81.28:0,81,3073	0/0:21,0:21:60.21:0,60,2364	0/0:48,0:48:99:0,141,5345	0/0:22,0:22:66.23:0,66,2576	0/0:26,0:26:75.26:0,75,2935	0/0:26,0:26:72.23:0,72,2691	1/1:0,18:18:48.16:1246,48,0	0/1:3,22:25:99:1624,0,168	0/0:22,0:22:66.21:0,66,2389	1/1:1,8:9:27.09:701,27,0
chr10	84790277	.	C	CCACCTTTATTTT	31745.92	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=12.540;DP=752;FS=3.525;HRun=0;HaplotypeScore=243.8554;InbreedingCoeff=0.9235;MQ=86.09;MQ0=0;MQRankSum=-19.022;QD=103.74;ReadPosRankSum=-0.786;VQSLOD=4.6538;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,10:33:51.17:2654,51,0	0/0:9,0:9:24.08:0,24,903	0/0:31,0:31:72.21:0,72,2107	0/0:28,0:27:71.65:0,72,2143	0/0:18,0:18:51.16:0,51,1832	1/1:4,13:20:48.16:2741,48,0	0/0:26,0:26:75.24:0,75,2566	1/1:20,3:45:99:6998,132,0	0/0:23,0:23:69.23:0,69,2445	0/0:30,0:30:78.25:0,78,2430	0/0:27,0:27:75.14:0,75,2469	0/0:41,0:41:99:0,117,4116	0/0:33,0:33:99:0,99,3272	0/0:22,0:22:63.20:0,63,2201	0/0:49,0:49:99:0,138,4785	0/0:39,0:39:99:0,117,4122	0/0:15,0:15:42.14:0,42,1434	0/0:23,0:23:63.22:0,63,2237	1/1:3,3:16:42.12:1563,42,0	1/1:4,13:26:57.14:2824,57,0	1/1:9,3:25:33.11:1516,33,0	1/1:4,8:17:33.11:1757,33,0	0/1:22,0:22:99:127,0,1697	0/0:32,0:32:90.31:0,90,3371	1/1:9,8:30:42.14:2091,42,0	1/1:8,15:27:29.32:4253,29,0	1/1:11,17:35:81.28:4300,81,0	1/1:1,5:9:15.05:922,15,0
chr10	84793237	.	T	TA	4328.62	PASS	AB=0.979;AC=22;AF=0.393;AN=56;BaseQRankSum=-9.613;DP=501;FS=0.000;HRun=9;HaplotypeScore=49.6477;InbreedingCoeff=0.8332;MQ=60.73;MQ0=2;MQRankSum=-0.975;QD=21.86;ReadPosRankSum=-2.308;VQSLOD=4.5646;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:53.98:0,54,466	0/0:7,0:7:20.98:0,21,177	0/1:10,0:9:5.55:6,0,81	0/0:10,0:7:0.69:0,1,113	0/0:30,0:30:77.94:0,78,672	1/1:5,12:17:36.06:385,36,0	0/0:16,0:16:23.96:0,24,200	1/1:5,24:29:72.16:779,72,0	0/0:22,0:22:56.97:0,57,490	0/0:22,0:22:59.98:0,60,521	0/0:28,0:28:77.97:0,78,677	0/0:23,0:23:50.99:0,51,443	0/0:15,0:15:32.98:0,33,286	0/0:23,0:23:59.96:0,60,517	0/0:24,0:24:65.97:0,66,570	0/0:15,0:15:38.99:0,39,339	0/1:22,1:23:11.83:12,0,335	0/0:20,0:20:44.82:0,45,390	1/1:5,13:18:39.11:431,39,0	1/1:2,16:19:50.97:542,51,0	1/1:1,7:8:18.05:199,18,0	1/1:1,9:10:21.06:232,21,0	0/0:16,0:16:44.98:0,45,390	0/0:10,0:10:17.99:0,18,156	1/1:6,10:16:39.09:419,39,0	1/1:1,12:13:39.10:423,39,0	1/1:4,20:24:54.15:597,54,0	1/1:3,8:11:29.98:303,30,0
chr10	84793283	.	C	CTCTT	2328.48	PASS	AB=0.763;AC=7;AF=0.125;AN=56;BaseQRankSum=-1.958;DP=605;FS=2.193;HRun=0;HaplotypeScore=103.7209;InbreedingCoeff=0.5272;MQ=69.99;MQ0=5;MQRankSum=-0.919;QD=26.76;ReadPosRankSum=0.063;VQSLOD=3.5980;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:52.11:0,52,1015	0/0:5,0:5:15.04:0,15,223	0/0:25,0:18:5.84:0,6,299	0/1:28,0:18:1.53:2,0,59	0/0:28,0:28:81.22:0,81,1218	0/1:9,6:15:13.38:677,0,13	0/0:17,0:17:32.78:0,33,425	0/0:35,0:35:54.14:0,54,817	0/0:16,0:16:27.09:0,27,432	0/0:27,0:27:69.23:0,69,1112	0/0:36,0:36:84.24:0,84,1298	0/0:21,0:21:45.14:0,45,709	0/0:20,0:20:33.09:0,33,490	0/0:25,0:25:33.11:0,33,544	0/0:28,0:28:54.18:0,54,880	0/0:18,0:18:33.09:0,33,493	0/0:26,0:26:60.17:0,60,933	0/0:23,0:23:48.13:0,48,763	0/0:24,0:22:54.15:0,54,817	0/0:23,0:23:51.17:0,51,824	0/0:5,0:5:9.02:0,9,124	0/0:14,0:14:27.09:0,27,445	0/0:24,0:24:63.17:0,63,937	0/0:9,0:9:17.57:0,18,259	0/1:5,13:19:13.38:705,0,13	1/1:11,7:18:33.10:712,33,0	0/0:33,0:33:72.22:0,72,1133	1/1:2,5:7:15.05:367,15,0
chr10	84793442	.	CT	C	2720.94	PASS	AB=0.899;AC=23;AF=0.411;AN=56;BaseQRankSum=2.413;DP=608;FS=8.003;HRun=12;HaplotypeScore=75.5230;InbreedingCoeff=0.7189;MQ=69.95;MQ0=1;MQRankSum=0.120;QD=10.04;ReadPosRankSum=4.653;VQSLOD=2.7518;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,27:36:76.65:580,77,0	1/1:2,4:6:8.96:70,9,0	0/1:27,3:18:63.10:63,0,134	0/1:19,2:17:38.68:41,0,39	0/0:22,2:27:7.42:0,7,404	1/1:7,11:18:26.86:209,27,0	0/0:14,0:14:39.06:0,39,389	0/0:13,0:28:54.89:0,55,340	0/0:16,1:17:24.29:0,24,411	1/1:10,14:24:35.80:279,36,0	1/1:2,20:25:53.85:388,54,0	0/0:19,0:19:45.17:0,45,425	0/0:13,1:14:15.75:0,16,323	0/0:18,1:19:20.40:0,20,377	0/0:29,4:35:13.35:0,13,677	1/1:2,17:20:10.45:254,10,0	1/1:5,19:24:33.85:426,34,0	0/0:22,1:24:27.84:0,28,488	0/0:9,0:24:45.39:0,45,270	0/0:5,0:22:57.97:0,58,342	0/0:19,3:22:10.63:0,11,461	0/1:5,2:20:2.65:3,0,168	0/0:16,2:18:1.61:0,2,372	0/0:22,2:24:30.86:0,31,488	1/1:4,12:16:27.74:211,28,0	1/1:8,13:21:5.30:220,5,0	0/0:4,0:29:46.67:0,47,263	1/1:0,9:9:23.91:186,24,0
chr10	84793935	.	CAATAAATGT	C	1210.76	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.527;DP=590;FS=2.162;HRun=0;HaplotypeScore=154.9609;InbreedingCoeff=0.9903;MQ=82.22;MQ0=0;MQRankSum=-6.696;QD=50.45;ReadPosRankSum=0.165;VQSLOD=3.6147;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:45.15:1306,45,0	0/0:6,0:6:18.06:0,18,833	0/0:27,0:27:56.94:0,57,1934	0/0:20,0:20:51.12:0,51,2004	0/0:17,0:17:42.11:0,42,1720	0/0:15,0:15:30.10:0,30,1383	0/0:19,0:19:54.19:0,54,2295	0/0:33,0:33:78.27:0,78,3433	0/0:28,0:28:63.20:0,63,2726	0/0:18,0:18:45.15:0,45,1939	0/0:15,0:15:45.15:0,45,1988	0/0:23,0:23:57.16:0,57,2378	0/0:27,0:27:78.23:0,78,3230	0/0:23,0:23:57.18:0,57,2456	0/0:22,0:22:63.22:0,63,2964	0/0:35,0:35:90.26:0,90,3737	0/0:10,0:10:27.09:0,27,1234	0/0:23,0:23:57.18:0,57,2468	0/0:19,0:19:51.18:0,51,2349	0/0:30,0:30:81.26:0,81,3406	0/0:35,0:35:99:0,99,4200	0/0:15,0:15:39.13:0,39,1737	0/0:16,0:16:45.15:0,45,2069	0/0:21,0:21:51.16:0,51,2230	0/0:14,0:14:39.13:0,39,1803	0/0:15,0:15:42.14:0,42,1977	0/0:23,0:23:63.20:0,63,2744	0/0:17,0:17:51.18:0,51,2396
chr10	84794390	.	T	TA	3833.43	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.324;DP=529;FS=11.012;HRun=5;HaplotypeScore=63.5171;InbreedingCoeff=0.9868;MQ=80.59;MQ0=1;MQRankSum=-0.035;QD=39.12;ReadPosRankSum=2.405;VQSLOD=1.9562;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.17:0,51,711	0/0:7,0:7:21.07:0,21,290	0/0:30,0:27:45.51:0,46,601	0/0:13,0:10:21.32:0,21,156	0/0:33,0:33:96.30:0,96,1301	1/1:1,26:27:75.23:1081,75,0	0/0:21,0:21:63.19:0,63,832	0/0:27,0:27:81.26:0,81,1111	0/0:19,0:19:57.18:0,57,779	0/0:25,0:25:75.25:0,75,1047	0/0:20,0:20:60.19:0,60,823	0/0:14,0:14:39.12:0,39,529	0/0:7,0:7:21.07:0,21,293	0/0:12,0:12:36.12:0,36,489	0/0:19,0:19:57.17:0,57,754	0/0:24,0:24:69.15:0,69,866	0/0:28,0:28:81.24:0,81,1089	0/0:8,0:8:21.07:0,21,291	0/0:15,0:15:45.13:0,45,596	0/0:20,0:20:60.18:0,60,807	0/0:5,0:5:15.03:0,15,178	0/0:14,0:14:42.12:0,42,552	0/0:17,0:17:51.16:0,51,690	0/0:13,0:13:39.12:0,39,528	1/1:2,30:32:87.28:1267,87,0	1/1:6,13:19:15.25:728,15,0	0/0:21,0:21:63.20:0,63,851	1/1:5,15:20:51.17:757,51,0
chr10	84794463	.	T	TA	5178.56	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-2.942;DP=425;FS=0.402;HRun=9;HaplotypeScore=52.7246;InbreedingCoeff=0.9318;MQ=69.20;MQ0=0;MQRankSum=0.509;QD=20.63;ReadPosRankSum=0.709;VQSLOD=5.3064;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:38.97:0,39,338	1/1:0,9:9:24.06:266,24,0	0/0:9,0:8:2.12:0,2,12	0/0:4,0:3:5.98:0,6,47	0/0:19,0:19:50.95:0,51,434	1/1:4,0:17:40.04:215,40,0	0/0:15,0:15:38.99:0,39,339	1/1:7,24:31:46.14:737,46,0	0/0:15,0:15:35.98:0,36,312	1/1:8,10:18:29.79:329,30,0	1/1:5,9:16:29.78:294,30,0	0/0:18,0:19:53.03:0,53,448	0/0:11,0:11:26.98:0,27,231	0/0:6,0:6:14.99:0,15,130	0/0:14,0:14:35.98:0,36,312	1/1:2,21:23:57.15:631,57,0	1/1:3,16:19:42.11:465,42,0	0/0:13,0:13:35.97:0,36,308	1/1:1,12:13:36.09:390,36,0	1/1:3,7:10:24.05:258,24,0	1/1:0,1:1:3.01:33,3,0	1/1:2,12:14:33.01:349,33,0	0/0:14,0:14:35.98:0,36,312	0/0:16,0:16:38.99:0,39,338	1/1:6,0:17:43.19:243,43,0	1/1:3,0:25:39.61:296,40,0	1/1:2,17:21:41.16:485,41,0	1/1:4,0:17:38.48:189,38,0
chr10	84794879	.	T	TA	1293.47	PASS	AB=0.821;AC=17;AF=0.304;AN=56;BaseQRankSum=-3.392;DP=359;FS=11.995;HRun=12;HaplotypeScore=46.0955;InbreedingCoeff=0.5414;MQ=68.31;MQ0=0;MQRankSum=-0.207;QD=8.62;ReadPosRankSum=-0.781;VQSLOD=0.6593;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,47:64:58.56:672,59,0	0/0:2,0:2:5.97:0,6,44	0/0:8,0:9:12.18:0,12,62	0/1:9,0:9:12.81:13,0,47	0/0:9,0:9:11.87:0,12,87	0/0:11,0:12:28.88:0,29,203	0/0:27,0:28:62.97:0,63,448	1/1:7,6:13:20.95:192,21,0	0/0:9,0:9:8.87:0,9,66	0/0:10,0:10:17.85:0,18,131	0/1:4,1:5:17.25:17,0,54	0/0:14,0:14:20.79:0,21,153	0/1:2,1:4:15.90:23,0,16	0/0:6,0:6:17.90:0,18,131	0/0:6,0:8:13.94:0,14,93	0/0:4,0:5:13.97:0,14,93	0/0:30,0:31:70.43:0,70,500	0/0:20,0:20:32.68:0,33,240	0/1:3,5:8:6.93:87,0,7	1/1:2,5:7:12.02:117,12,0	1/1:7,3:11:11.86:102,12,0	1/1:3,5:8:11.97:107,12,0	0/0:7,0:8:13.94:0,14,93	0/1:10,2:12:2.37:2,0,146	0/0:1,0:1:2.98:0,3,22	0/0:21,0:21:38.69:0,39,283	1/1:2,6:8:15.02:146,15,0	0/0:15,0:15:35.75:0,36,259
chr10	84794951	.	GCGCACGCA	G	636.16	PASS	AC=10;AF=0.250;AN=40;BaseQRankSum=3.710;DP=317;FS=1.097;HRun=0;HaplotypeScore=89.3681;InbreedingCoeff=0.7529;MQ=60.78;MQ0=2;MQRankSum=-4.726;QD=7.85;ReadPosRankSum=0.562;VQSLOD=1.7073;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:34:10.95:89,11,0	./.	./.	./.	./.	0/0:12,0:12:27.09:0,27,902	0/0:35,0:35:33.09:0,33,986	0/0:10,0:10:0.47:0,0,1	0/0:9,0:9:6.02:0,6,244	1/1:3,2:5:6.02:146,6,0	1/1:2,1:3:6.01:76,6,0	0/0:9,0:9:12.03:0,12,378	./.	0/0:8,0:8:9.03:0,9,367	0/0:5,0:5:12.04:0,12,423	1/1:3,2:5:9.03:200,9,0	1/1:26,8:34:12.04:263,12,0	0/0:22,0:23:42.13:0,42,1360	0/0:8,0:6:3.01:0,3,71	./.	0/0:23,0:23:12.02:0,12,206	./.	./.	0/0:18,0:18:24.08:0,24,885	0/0:6,0:6:9.03:0,9,325	0/0:13,0:13:17.15:0,17,330	0/0:5,0:6:12.04:0,12,311	0/0:21,0:21:27.09:0,27,797
chr10	84795076	.	AAT	A	1318.84	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=2.660;DP=261;FS=0.646;HRun=0;HaplotypeScore=50.0504;InbreedingCoeff=0.7507;MQ=70.35;MQ0=2;MQRankSum=-0.752;QD=21.98;ReadPosRankSum=-0.872;VQSLOD=3.1852;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:24.08:0,24,367	0/0:2,0:2:3:0,3,25	1/1:8,0:4:2.68:11,3,0	0/0:13,0:7:5.80:0,6,41	0/0:8,0:8:21.06:0,21,324	1/1:3,13:16:45.10:550,45,0	0/0:4,0:4:12.04:0,12,199	0/0:9,0:14:25.07:0,25,192	0/0:1,0:5:9:0,9,80	0/0:5,0:5:11.66:0,12,123	0/0:6,0:6:9:0,9,119	0/0:6,0:6:12.04:0,12,193	0/0:8,0:8:24.07:0,24,362	0/0:8,0:8:21.07:0,21,342	0/0:3,0:3:9.03:0,9,144	0/0:5,0:5:12.04:0,12,195	0/0:27,0:27:11.74:0,12,694	0/0:31,0:31:84.27:0,84,1369	0/0:6,0:14:10.69:0,11,193	0/0:2,0:4:8.99:0,9,75	0/0:6,0:11:11.28:0,11,105	./.	0/0:2,0:2:6.02:0,6,100	0/0:3,0:3:6.02:0,6,100	1/1:7,10:17:38.98:417,39,0	1/1:5,8:13:27.08:328,27,0	0/0:3,0:8:18.74:0,19,151	1/1:1,5:6:15.01:172,15,0
chr10	84795089	.	ATG	A	627.38	PASS	AB=0.979;AC=13;AF=0.232;AN=56;BaseQRankSum=6.457;DP=299;FS=0.566;HRun=0;HaplotypeScore=61.9193;InbreedingCoeff=0.0100;MQ=62.77;MQ0=3;MQRankSum=-1.155;QD=4.65;ReadPosRankSum=-0.606;VQSLOD=2.1781;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:99:100,0,134	1/1:4,0:4:2.51:24,3,0	1/1:15,0:4:3.20:17,3,0	0/0:19,0:5:2.04:0,2,6	0/0:10,0:10:30.05:0,30,447	0/1:17,0:17:1.96:169,0,2	0/0:7,0:7:21.05:0,21,331	0/0:19,1:20:1.75:0,2,371	0/0:5,0:5:12:0,12,109	0/1:6,0:6:22.65:58,0,23	0/1:5,0:5:33.29:60,0,33	0/0:4,0:4:12.03:0,12,196	0/0:7,0:7:21.07:0,21,399	0/0:8,0:8:24.05:0,24,394	0/0:5,0:5:15.02:0,15,202	0/0:4,0:4:11.99:0,12,102	0/1:21,2:23:99:124,0,284	0/0:32,0:32:96.21:0,96,1670	0/0:18,0:18:10.21:0,10,403	0/0:6,0:6:15:0,15,132	0/1:7,1:8:10.16:10,0,100	0/0:1,0:1:3:0,3,25	0/0:2,0:2:6.02:0,6,116	0/0:3,0:3:9.01:0,9,139	0/1:18,0:18:39.81:91,0,40	0/1:15,0:15:69.81:70,0,92	0/0:12,1:13:32.73:0,33,266	0/1:7,0:7:6.97:50,0,7
chr10	84795135	.	GTA	G	7414.62	PASS	AB=0.818;AC=33;AF=0.589;AN=56;BaseQRankSum=11.841;DP=380;FS=1.008;HRun=0;HaplotypeScore=58.5120;InbreedingCoeff=0.8737;MQ=63.57;MQ0=2;MQRankSum=-0.399;QD=28.52;ReadPosRankSum=1.410;VQSLOD=5.9107;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:60.19:764,60,0	1/1:0,4:4:6.02:76,6,0	0/0:9,0:4:5.61:0,6,58	0/0:12,0:5:9.03:0,9,134	0/0:17,0:17:48.16:0,48,788	1/1:3,14:17:39.12:496,39,0	0/0:12,0:12:33.11:0,33,552	1/1:7,19:26:57.18:724,57,0	0/0:7,0:7:21.07:0,21,348	1/1:2,9:12:26.34:342,26,0	1/1:1,8:9:24.08:305,24,0	0/1:7,2:9:13.92:14,0,321	0/0:7,0:7:21.07:0,21,351	0/0:8,0:8:24.08:0,24,401	0/0:7,0:7:21.07:0,21,351	1/1:0,9:9:24.08:305,24,0	1/1:4,29:33:69.18:860,69,0	0/0:26,0:26:75.22:0,75,1193	1/1:4,11:15:33.11:419,33,0	1/1:1,10:12:26.92:319,27,0	1/1:3,8:11:21.07:267,21,0	1/1:0,4:4:9.03:115,9,0	0/0:5,0:5:11.85:0,12,194	0/0:10,0:10:27.09:0,27,447	1/1:2,17:18:51.16:649,51,0	1/1:2,18:20:57.17:713,57,0	1/1:0,16:16:48.15:611,48,0	1/1:1,13:15:35.95:434,36,0
chr10	84795753	.	TA	T	1059.42	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=6.032;DP=368;FS=12.324;HRun=7;HaplotypeScore=54.1037;InbreedingCoeff=0.8696;MQ=59.52;MQ0=0;MQRankSum=0.215;QD=21.62;ReadPosRankSum=1.530;VQSLOD=2.3640;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.24:0,87,1067	0/0:13,0:13:39.12:0,39,478	0/0:13,0:6:11.97:0,12,129	0/0:5,0:2:3:0,3,28	0/0:25,0:25:66.21:0,66,830	1/1:2,10:11:24.05:245,24,0	1/1:0,1:1:3.01:31,3,0	0/0:31,0:30:87.24:0,87,1049	0/0:8,0:8:21.07:0,21,259	0/0:16,0:16:45.14:0,45,566	0/0:16,0:16:36.09:0,36,439	0/0:7,0:7:21.07:0,21,264	0/0:6,0:6:15.05:0,15,189	0/0:8,0:8:15.05:0,15,188	0/0:8,0:8:21.07:0,21,264	0/0:11,0:11:27.07:0,27,325	0/0:34,0:34:84.22:0,84,1027	0/0:21,0:21:60.19:0,60,755	0/0:20,0:20:54.17:0,54,668	0/0:18,0:18:39.60:0,40,491	0/0:2,0:2:6.02:0,6,75	./.	0/0:7,0:7:18.05:0,18,214	0/0:4,0:4:12.04:0,12,151	1/1:3,13:16:39.09:398,39,0	1/1:1,9:10:30.07:306,30,0	0/0:15,0:15:42.13:0,42,528	1/1:2,8:10:24.05:245,24,0
chr10	84795802	.	A	AT	6095.71	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=0.696;DP=369;FS=11.122;HRun=7;HaplotypeScore=41.1257;InbreedingCoeff=0.8987;MQ=58.35;MQ0=6;MQRankSum=-1.380;QD=27.34;ReadPosRankSum=0.655;VQSLOD=4.5515;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:90.12:0,90,864	1/1:0,11:11:33.10:399,33,0	0/0:10,0:4:5.95:0,6,47	0/0:7,0:3:3:0,3,29	0/0:21,0:21:48.03:0,48,451	1/1:2,8:9:27.07:315,27,0	1/1:1,3:3:9.03:109,9,0	1/1:7,19:25:63.14:734,63,0	0/0:9,0:9:24.04:0,24,232	1/1:1,14:15:39.07:434,39,0	1/1:3,9:11:21.06:253,21,0	0/0:8,0:8:21.03:0,21,203	0/0:7,0:6:15.02:0,15,145	0/0:7,0:7:18.03:0,18,174	0/0:5,0:5:12.02:0,12,116	1/1:1,16:16:42.13:507,42,0	1/1:7,29:35:84.26:1015,84,0	0/0:24,0:23:51.05:0,51,484	1/1:3,12:14:30.07:349,30,0	1/1:1,19:20:48.15:579,48,0	1/1:3,2:3:6.02:72,6,0	1/1:1,1:2:3.01:36,3,0	0/0:6,0:6:15.02:0,15,145	0/0:7,0:7:18.03:0,18,174	1/1:4,5:8:15.04:170,15,0	1/1:2,9:11:27.08:326,27,0	1/1:1,13:14:36.11:435,36,0	1/1:2,14:15:30.09:362,30,0
chr10	84796029	.	GTTTAT	G	5809.16	PASS	AB=0.556;AC=19;AF=0.339;AN=56;BaseQRankSum=12.438;DP=536;FS=0.851;HRun=0;HaplotypeScore=102.3639;InbreedingCoeff=0.8953;MQ=69.41;MQ0=0;MQRankSum=-6.756;QD=39.52;ReadPosRankSum=2.260;VQSLOD=5.0109;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.16:0,90,2368	1/1:1,8:9:14.84:223,15,0	0/0:25,0:22:35.88:0,36,1216	0/0:28,0:27:48.96:0,49,1335	0/0:17,0:17:47.68:0,48,1236	1/1:2,17:19:36.12:732,36,0	1/1:1,17:17:4.15:425,4,0	0/0:39,0:39:99:0,108,2444	0/0:20,0:20:57.14:0,57,1664	1/1:0,11:11:30.07:550,30,0	1/1:0,8:7:20.88:309,21,0	0/0:21,0:21:60.16:0,60,1650	0/0:21,0:20:57.13:0,57,1455	0/0:23,0:23:60.12:0,60,1635	0/0:29,0:29:78.23:0,78,2270	1/1:2,22:24:60.20:1208,60,0	1/1:0,19:19:30.10:603,30,0	0/0:20,0:20:51.08:0,51,1351	0/0:13,0:13:36.09:0,36,987	0/0:9,0:9:26.41:0,26,666	0/0:20,0:20:53.82:0,54,1424	0/0:4,0:4:12.01:0,12,302	0/0:7,0:7:18.03:0,18,423	0/0:30,0:30:78.24:0,78,2153	1/1:0,10:10:27.09:566,27,0	1/1:0,19:18:54.12:1014,54,0	0/0:30,0:30:90.26:0,90,2491	0/1:2,8:10:10.04:179,0,10
chr10	84796250	.	A	ATTAT	4380.85	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-5.871;DP=571;FS=11.182;HRun=0;HaplotypeScore=93.5675;InbreedingCoeff=0.8840;MQ=63.03;MQ0=4;MQRankSum=-3.090;QD=42.95;ReadPosRankSum=-0.882;VQSLOD=4.7353;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:78.27:0,78,1415	1/1:3,8:11:24.08:627,24,0	0/0:16,0:15:29.93:0,30,446	0/1:13,0:12:23.73:24,0,170	0/0:23,0:23:66.23:0,66,1194	0/0:26,0:26:72.25:0,72,1299	0/0:20,0:20:39.04:0,39,708	0/0:30,0:30:75.19:0,75,1292	0/0:20,0:20:54.19:0,54,982	1/1:6,18:25:60.14:1391,60,0	1/1:5,10:16:33.11:770,33,0	0/0:19,0:19:45.15:0,45,812	0/0:14,0:14:24.08:0,24,428	0/0:15,0:15:39.13:0,39,698	0/0:23,0:23:48.15:0,48,842	1/1:3,16:19:30.10:785,30,0	1/1:2,14:16:30.10:783,30,0	0/0:22,0:22:57.16:0,57,973	0/0:26,0:24:66.22:0,66,1168	0/0:29,0:29:78.25:0,78,1383	0/0:28,0:28:54.18:0,54,982	0/0:7,0:7:18.04:0,18,297	0/0:18,0:18:48.11:0,48,781	0/0:8,0:8:24.08:0,24,436	0/0:16,0:16:48.16:0,48,873	0/0:32,0:32:84.28:0,84,1496	0/0:27,0:26:68.99:0,69,1254	0/0:19,0:19:57.20:0,57,1036
chr10	84796320	.	TTGTG	T	1006.95	PASS	AB=0.940;AC=15;AF=0.278;AN=54;BaseQRankSum=2.212;DP=594;FS=0.721;HRun=0;HaplotypeScore=117.1691;InbreedingCoeff=0.2014;MQ=70.34;MQ0=11;MQRankSum=-0.223;QD=4.30;ReadPosRankSum=0.751;VQSLOD=2.3885;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:31:3.47:0,3,25	0/0:11,0:11:7.88:0,8,56	./.	0/0:28,0:16:3.01:0,3,41	0/1:28,0:29:4.15:4,0,585	1/1:9,9:19:5.54:226,6,0	0/1:12,0:22:9.66:10,0,47	0/0:31,0:29:28.81:0,29,421	0/1:20,0:20:13.83:14,0,524	0/1:22,0:22:33.18:42,0,33	0/0:15,0:15:3.20:0,3,42	0/0:17,0:17:21.15:0,21,412	0/0:19,0:19:31.55:0,32,494	0/1:19,0:19:23.59:24,0,306	0/0:16,0:18:31.50:0,32,686	0/1:21,0:21:94.51:120,0,95	0/0:20,0:20:14.69:0,15,112	0/0:24,0:25:3.84:0,4,692	0/0:21,0:21:22.32:0,22,376	0/0:10,0:15:3.01:0,3,53	0/0:22,0:20:0.06:0,0,129	0/0:6,0:16:8.77:0,9,95	0/0:12,0:14:29.57:0,30,585	0/1:24,2:25:5.43:5,0,785	1/1:6,8:14:8.95:143,9,0	1/1:19,12:31:27.48:340,27,0	0/0:19,0:19:31.64:0,32,433	1/1:3,8:11:15.05:238,15,0
chr10	84796354	.	GTGTT	G	1328.40	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=4.873;DP=593;FS=27.642;HRun=0;HaplotypeScore=109.6675;InbreedingCoeff=0.2835;MQ=55.36;MQ0=20;MQRankSum=0.670;QD=4.63;ReadPosRankSum=-0.067;VQSLOD=0.6524;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:49.76:0,50,429	1/1:7,0:7:6.41:51,6,0	0/0:51,0:21:33.34:0,33,323	0/1:46,0:14:4.67:5,0,231	0/1:25,0:25:2.49:2,0,708	0/1:16,0:16:84.83:85,0,102	0/0:26,0:26:47.56:0,48,406	0/1:34,0:29:40.60:41,0,611	0/0:19,0:19:15.88:0,16,544	1/1:14,0:13:22.88:281,23,0	1/1:9,0:9:1.31:106,1,0	0/0:13,0:13:31.35:0,31,446	0/0:15,0:15:10.88:0,11,485	0/0:18,0:18:11.74:0,12,381	0/0:17,0:16:29.25:0,29,641	1/1:17,4:21:14.73:310,15,0	1/1:24,0:24:37.66:283,38,0	0/0:20,0:20:14.32:0,14,742	0/1:17,0:14:5.82:6,0,521	0/0:15,0:14:4.87:0,5,186	0/1:28,0:25:41.87:42,0,196	0/0:16,0:16:0.66:0,1,121	0/0:14,0:14:38.16:0,38,651	0/0:28,0:27:19.87:0,20,988	0/1:15,0:14:64.52:65,0,147	0/1:22,0:22:99:104,0,221	0/0:18,0:18:1.81:0,2,409	1/1:9,0:9:14.97:125,15,0
chr10	84796372	.	T	TG	824.29	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=7.975;DP=486;FS=0.000;HRun=6;HaplotypeScore=68.5129;InbreedingCoeff=0.8424;MQ=62.81;MQ0=10;MQRankSum=-3.122;QD=7.85;ReadPosRankSum=-0.656;VQSLOD=-0.0153;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:71.68:0,72,678	1/1:1,3:4:9.03:113,9,0	0/1:48,0:25:9.92:10,0,342	0/0:44,0:20:45.52:0,46,443	0/0:20,0:20:51.11:0,51,520	0/0:16,0:16:33.07:0,33,337	0/0:23,0:23:60.08:0,60,599	0/0:35,0:35:99:0,105,1062	0/0:13,0:13:33.07:0,33,337	1/1:3,7:9:15.04:174,15,0	1/1:0,4:4:6.02:75,6,0	0/0:7,0:7:18.04:0,18,184	0/0:10,0:10:24.04:0,24,238	0/0:12,0:12:36.08:0,36,367	0/0:10,0:10:23.99:0,24,233	1/1:9,10:19:19.45:205,19,0	1/1:4,14:18:32.94:415,33,0	0/0:12,0:12:26.70:0,27,274	0/0:16,0:16:42.09:0,42,428	0/0:14,0:14:39.08:0,39,392	0/0:22,0:21:48.11:0,48,489	0/0:12,0:12:23.62:0,24,243	0/0:9,0:9:21.04:0,21,208	0/0:22,0:22:48.07:0,48,480	0/0:16,0:15:33.07:0,33,332	0/0:16,0:16:42.09:0,42,428	0/0:14,0:14:36.06:0,36,359	0/0:7,0:7:12.03:0,12,122
chr10	84796774	.	CTTGT	C	7381.42	PASS	AB=0.632;AC=33;AF=0.589;AN=56;BaseQRankSum=12.105;DP=641;FS=10.000;HRun=0;HaplotypeScore=126.1607;InbreedingCoeff=0.8963;MQ=65.71;MQ0=2;MQRankSum=-5.881;QD=19.22;ReadPosRankSum=-0.066;VQSLOD=4.1475;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,27:39:63.13:977,63,0	1/1:2,0:6:6.01:56,6,0	0/0:30,0:27:34.64:0,35,623	0/0:21,0:18:21.54:0,22,460	0/0:34,0:34:60.21:0,60,1365	1/1:4,15:19:33.11:542,33,0	1/1:8,10:18:30.10:493,30,0	1/1:13,23:36:65.84:960,66,0	0/0:23,0:23:45.14:0,45,1039	1/1:12,0:22:9.03:156,9,0	1/1:14,0:22:18:162,18,0	0/0:16,0:16:36.12:0,36,872	0/0:20,0:20:57.18:0,57,1320	0/0:26,0:26:51.18:0,51,1237	0/0:27,0:27:54.19:0,54,1318	0/1:10,0:24:49.62:170,0,50	1/1:12,0:35:44.17:417,44,0	0/0:16,0:15:39.13:0,39,910	1/1:8,8:16:23.99:287,24,0	1/1:10,7:17:20.99:286,21,0	1/1:11,19:30:39.13:641,39,0	1/1:10,14:24:29.91:401,30,0	0/0:15,0:15:30.10:0,30,725	0/0:29,0:29:72.23:0,72,1694	1/1:4,5:9:14.96:188,15,0	1/1:14,12:26:36.06:513,36,0	1/1:14,18:32:53.44:885,53,0	1/1:3,6:9:15.05:247,15,0
chr10	84796921	.	AT	A	2988.28	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=5.775;DP=548;FS=0.843;HRun=7;HaplotypeScore=78.6968;InbreedingCoeff=0.9221;MQ=64.29;MQ0=1;MQRankSum=0.016;QD=20.90;ReadPosRankSum=1.160;VQSLOD=3.2809;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,153,1829	0/0:3,0:3:6.91:0,7,77	0/0:10,0:9:23.74:0,24,262	0/1:14,0:10:1.17:1,0,137	0/0:20,0:20:60.17:0,60,739	0/0:12,0:12:30.10:0,30,377	0/0:18,0:18:48.14:0,48,592	1/1:3,17:20:51.11:520,51,0	0/0:15,0:15:42.13:0,42,528	0/0:16,0:16:39.11:0,39,460	0/0:18,0:18:33.02:0,33,378	0/0:12,0:12:27.09:0,27,340	0/0:21,0:21:60.18:0,60,741	0/0:22,0:22:57.18:0,57,708	0/0:27,0:27:75.23:0,75,932	0/0:16,0:16:20.97:0,21,213	0/0:26,0:26:30.06:0,30,360	0/0:23,0:23:66.19:0,66,814	1/1:4,18:22:57.11:574,57,0	1/1:2,10:12:27.05:275,27,0	1/1:6,29:35:71.28:733,71,0	1/1:1,9:10:24.05:244,24,0	0/0:9,0:9:21.07:0,21,264	0/0:21,0:21:63.19:0,63,779	0/0:18,0:18:54.17:0,54,678	0/0:28,0:28:69.22:0,69,863	1/1:1,29:30:81.18:826,81,0	0/0:12,0:12:36.11:0,36,450
chr10	84796949	.	G	GTGTGTA	1241.11	PASS	AB=0.591;AC=9;AF=0.161;AN=56;BaseQRankSum=1.074;DP=608;FS=4.093;HRun=0;HaplotypeScore=149.8411;InbreedingCoeff=0.7750;MQ=55.96;MQ0=23;MQRankSum=-2.666;QD=20.69;ReadPosRankSum=1.820;VQSLOD=3.4559;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:87.28:0,87,1851	1/1:0,3:3:3.01:104,3,0	0/0:46,0:10:20.97:0,21,334	0/0:44,0:18:35.73:0,36,720	0/0:18,0:18:54.10:0,54,1159	0/0:21,0:20:39.12:0,39,850	0/0:23,0:23:57.18:0,57,1242	0/0:28,0:26:69.18:0,69,1162	0/0:12,0:12:36.06:0,36,678	0/1:4,8:12:15.54:337,0,16	1/1:6,9:17:18.06:481,18,0	0/0:12,0:12:33.03:0,33,530	0/0:18,0:18:47.97:0,48,995	0/0:23,0:23:66.21:0,66,1406	0/0:24,0:24:66.19:0,66,1384	1/1:0,10:11:5.91:120,6,0	1/1:3,11:16:12.04:345,12,0	0/0:26,0:26:69.16:0,69,1446	0/0:16,0:16:45.11:0,45,693	0/0:14,0:13:33.11:0,33,595	0/0:43,0:41:99:0,104,1898	0/0:8,0:8:24.08:0,24,426	0/0:8,0:8:21.06:0,21,380	0/0:33,0:32:72.20:0,72,1499	0/0:18,0:18:49.68:0,50,972	0/0:23,0:23:63.17:0,63,1239	0/0:27,0:27:53.59:0,54,1108	0/0:14,0:13:21.07:0,21,459
chr10	84796951	.	G	GTGTA	886.71	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=3.472;DP=615;FS=4.092;HRun=0;HaplotypeScore=132.1533;InbreedingCoeff=0.7708;MQ=55.75;MQ0=24;MQRankSum=-2.354;QD=15.03;ReadPosRankSum=2.170;VQSLOD=3.4410;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:87.28:0,87,1594	1/1:3,0:3:3.01:59,3,0	0/0:47,0:10:20.96:0,21,290	0/0:44,0:18:42.05:0,42,676	0/0:18,0:18:54.17:0,54,975	0/0:22,0:21:39.12:0,39,706	0/0:23,0:23:57.18:0,57,1039	0/0:29,0:27:70.13:0,70,1045	0/0:12,0:12:36.07:0,36,570	0/1:14,0:13:29.02:221,0,29	1/1:15,3:18:18.06:415,18,0	0/0:12,0:12:33.03:0,33,461	0/0:19,0:19:50.94:0,51,855	0/0:23,0:23:66.21:0,66,1209	0/0:24,0:24:66.20:0,66,1185	1/1:11,0:11:5.91:75,6,0	1/1:12,1:13:12.04:264,12,0	0/0:27,0:27:69.16:0,69,1223	0/0:16,0:16:45.10:0,45,605	0/0:14,0:13:33.11:0,33,535	0/0:45,0:43:99:0,104,1624	0/0:8,0:8:24.07:0,24,344	0/0:7,0:7:21.06:0,21,341	0/0:32,0:31:72.67:0,73,1275	0/0:18,0:18:49.02:0,49,837	0/0:23,0:23:63.17:0,63,1070	0/0:28,0:28:61.87:0,62,974	0/0:16,0:15:21.07:0,21,398
chr10	84796959	.	ATG	A	2153.12	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=-0.085;DP=582;FS=3.855;HRun=0;HaplotypeScore=92.0601;InbreedingCoeff=0.8719;MQ=54.18;MQ0=24;MQRankSum=4.627;QD=14.85;ReadPosRankSum=3.827;VQSLOD=3.5050;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,37:48:40.70:681,41,0	0/0:4,0:4:5.53:0,6,37	./.	0/0:40,1:17:2.09:0,2,129	0/0:19,0:19:16.13:0,16,688	1/1:4,17:21:29.92:330,30,0	1/1:5,17:23:41.95:471,42,0	0/0:25,0:29:40.73:0,41,295	0/0:10,0:10:27.06:0,27,398	0/0:11,0:10:3.90:0,4,41	0/0:16,0:16:17.97:0,18,147	0/0:9,0:9:21.04:0,21,287	0/0:17,0:17:36.11:0,36,532	0/0:21,0:21:42.12:0,42,636	0/0:24,0:24:56.82:0,57,857	0/0:10,0:10:11.23:0,11,61	0/0:9,0:9:11.95:0,12,94	0/0:25,1:26:9.96:0,10,593	0/0:7,0:12:21.01:0,21,208	0/0:7,0:11:15:0,15,131	0/0:30,0:46:86.74:0,87,787	0/0:3,0:9:18.47:0,18,158	0/0:6,0:6:18.06:0,18,281	0/0:33,0:32:57.17:0,57,869	1/1:9,8:17:18.05:211,18,0	1/1:6,15:21:44.81:465,45,0	0/0:19,0:25:52.30:0,52,523	1/1:4,10:13:15.04:176,15,0
chr10	84797033	.	GGTGTGGAAT	G	2699.56	PASS	AB=0.738;AC=10;AF=0.179;AN=56;BaseQRankSum=10.425;DP=500;FS=0.732;HRun=0;HaplotypeScore=138.4949;InbreedingCoeff=0.7494;MQ=78.70;MQ0=3;MQRankSum=-10.031;QD=42.85;ReadPosRankSum=0.614;VQSLOD=3.0495;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:78.27:0,78,3778	1/1:0,5:5:15.05:381,15,0	0/0:24,0:24:72.25:0,72,3319	0/0:12,0:12:33.11:0,33,1671	0/0:28,0:28:84.27:0,84,4021	0/0:19,0:19:51.18:0,51,2467	0/0:14,0:14:42.14:0,42,1972	0/0:27,0:27:78.27:0,78,3700	0/0:13,0:13:39.13:0,39,1958	1/1:0,8:8:24.08:630,24,0	1/1:0,12:12:30.02:668,30,0	0/0:17,0:17:51.18:0,51,2339	0/0:23,0:23:69.24:0,69,3325	0/0:17,0:17:51.18:0,51,2378	0/0:19,0:19:57.20:0,57,2870	0/1:1,11:12:99:793,0,116	1/1:0,5:5:15.05:378,15,0	0/0:25,0:25:75.17:0,75,3260	0/0:14,0:14:39.12:0,39,1833	0/0:14,0:13:39.13:0,39,1958	0/0:30,0:29:84.29:0,84,4251	0/0:14,0:14:42.14:0,42,2124	0/0:12,0:12:36.11:0,36,1687	0/0:21,0:20:60.21:0,60,2971	0/0:14,0:14:39.13:0,39,1951	0/1:20,1:21:16.26:16,0,2961	0/0:24,0:24:72.25:0,72,3537	0/0:16,0:15:30.10:0,30,1511
chr10	84797043	.	C	CCA	1709.01	PASS	AB=0.522;AC=9;AF=0.161;AN=56;BaseQRankSum=11.354;DP=494;FS=0.666;HRun=0;HaplotypeScore=76.3768;InbreedingCoeff=0.8751;MQ=80.80;MQ0=1;MQRankSum=-11.109;QD=31.65;ReadPosRankSum=-1.851;VQSLOD=4.9411;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:75.25:0,75,1147	1/1:2,5:7:21.07:286,21,0	0/0:23,0:23:66.20:0,66,938	0/0:13,0:13:36.12:0,36,551	0/0:26,0:26:78.26:0,78,1194	0/0:19,0:19:51.16:0,51,760	0/0:16,0:16:48.14:0,48,693	0/0:30,0:30:84.24:0,84,1261	0/0:14,0:14:42.14:0,42,643	1/1:5,8:14:39.13:586,39,0	1/1:2,12:14:36.10:466,36,0	0/0:13,0:13:39.13:0,39,596	0/0:20,0:20:60.20:0,60,919	0/0:13,0:13:39.13:0,39,597	0/0:18,0:18:51.17:0,51,781	0/1:1,11:12:9.84:355,0,10	1/1:2,5:7:15.05:179,15,0	0/0:22,0:22:63.19:0,63,942	0/0:17,0:17:51.13:0,51,750	0/0:14,0:14:42.14:0,42,643	0/0:28,0:28:84.27:0,84,1263	0/0:14,0:14:42.14:0,42,643	0/0:11,0:11:30.10:0,30,458	0/0:17,0:17:51.17:0,51,781	0/0:15,0:15:42.14:0,42,642	0/0:22,1:23:26.57:0,27,905	0/0:23,0:23:66.22:0,66,1011	0/0:19,0:18:36.12:0,36,545
chr10	84797591	.	G	GA	8996.17	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=17.073;DP=606;FS=3.457;HRun=1;HaplotypeScore=107.3892;InbreedingCoeff=0.9812;MQ=56.43;MQ0=3;MQRankSum=-12.689;QD=27.26;ReadPosRankSum=-3.182;VQSLOD=3.8723;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:18.29:715,18,0	1/1:0,7:7:12.04:168,12,0	0/0:45,1:30:79.52:0,80,1014	0/0:35,0:25:72.19:0,72,909	0/0:17,0:17:48.16:0,48,623	1/1:0,21:21:51.17:712,51,0	1/1:0,14:14:36.08:481,36,0	1/1:5,17:21:45.12:608,45,0	0/0:20,0:20:60.20:0,60,779	1/1:2,19:21:52.39:683,52,0	1/1:1,16:17:30.10:421,30,0	0/0:26,0:26:69.22:0,69,896	0/0:19,0:19:54.13:0,54,681	0/0:26,0:26:72.19:0,72,903	0/0:29,0:29:84.26:0,84,1075	1/1:1,26:26:9.16:590,9,0	1/1:0,17:17:36.09:481,36,0	0/0:25,0:25:69.22:0,69,894	1/1:4,16:18:48.15:655,48,0	1/1:2,30:29:45.15:632,45,0	1/1:2,9:11:21.07:294,21,0	1/1:0,20:20:42.14:584,42,0	0/0:19,0:19:57.19:0,57,740	0/0:14,0:14:42.14:0,42,545	1/1:0,19:18:27:335,27,0	1/1:1,21:22:60.20:844,60,0	1/1:0,28:28:45.15:625,45,0	1/1:1,8:8:12.04:167,12,0
chr10	84797871	.	CGGGGTG	C	5598.38	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=10.189;DP=310;FS=9.413;HRun=0;HaplotypeScore=86.8209;InbreedingCoeff=0.9068;MQ=73.57;MQ0=0;MQRankSum=-10.763;QD=33.93;ReadPosRankSum=0.327;VQSLOD=3.7246;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,13:22:45.15:953,45,0	0/0:5,0:5:12.04:0,12,323	0/0:13,0:13:24.04:0,24,652	0/0:10,0:9:4.30:0,4,79	0/0:6,0:6:15.05:0,15,502	1/1:5,13:18:39.13:834,39,0	1/1:5,7:12:21.07:449,21,0	1/1:15,6:21:21.07:423,21,0	0/0:7,0:7:15.05:0,15,481	0/0:6,0:6:15.05:0,15,395	0/0:15,0:15:21.04:0,21,516	0/0:11,0:11:24.08:0,24,801	0/0:11,0:11:27.09:0,27,868	0/0:9,0:9:16.30:0,16,505	0/0:6,0:6:12.04:0,12,400	0/0:11,0:11:27.08:0,27,678	0/0:21,0:21:60.18:0,60,1573	0/0:5,0:5:12.04:0,12,390	1/1:7,5:12:15.03:280,15,0	1/1:4,9:13:24.08:495,24,0	1/1:9,7:16:9.03:192,9,0	1/1:4,3:7:12.04:251,12,0	0/0:4,0:4:6.02:0,6,160	0/0:5,0:5:12.02:0,12,323	1/1:5,6:11:18.06:385,18,0	1/1:7,11:18:36.12:770,36,0	1/1:5,7:12:21.07:440,21,0	1/1:1,2:3:6.02:128,6,0
chr10	84798233	.	GA	G	4023.14	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=11.714;DP=328;FS=9.789;HRun=8;HaplotypeScore=53.9972;InbreedingCoeff=0.8739;MQ=61.85;MQ0=2;MQRankSum=-4.463;QD=21.29;ReadPosRankSum=0.932;VQSLOD=3.4141;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:32.94:131,33,0	1/1:0,1:1:3:29,3,0	0/0:7,0:6:8.62:0,9,131	0/0:5,0:5:4.50:0,4,22	0/0:8,0:8:18.05:0,18,208	1/1:2,8:10:24.03:232,24,0	1/1:2,16:18:45.07:434,45,0	1/1:1,20:21:60.06:567,60,0	0/0:10,0:10:24.07:0,24,290	1/1:1,6:7:18.03:174,18,0	1/1:1,5:6:12.01:116,12,0	0/0:12,0:12:27.07:0,27,314	0/0:13,1:14:1.15:0,1,287	0/0:11,0:11:30.09:0,30,361	0/0:13,0:13:30.09:0,30,362	1/1:2,9:11:27.04:260,27,0	1/1:2,27:28:72.11:693,72,0	0/0:26,0:25:52.08:0,52,783	1/1:3,10:12:30.04:288,30,0	1/1:1,6:7:15.02:144,15,0	1/1:3,11:14:30.04:290,30,0	1/1:3,2:5:6.01:58,6,0	0/0:8,0:8:21.06:0,21,253	0/0:25,0:25:66.20:0,66,797	1/1:1,3:4:9.01:87,9,0	1/1:0,8:8:24.04:231,24,0	1/1:0,6:6:18.03:174,18,0	1/1:0,4:4:12.02:116,12,0
chr10	84798234	.	AAAAAAAAG	A	900.68	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=0.510;DP=341;FS=6.590;HRun=0;HaplotypeScore=113.0599;InbreedingCoeff=0.2862;MQ=61.16;MQ0=2;MQRankSum=-5.770;QD=17.32;ReadPosRankSum=-2.243;VQSLOD=1.2397;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:42.10:991,42,0	0/0:1,0:1:3.01:0,3,52	0/0:8,0:6:18.05:0,18,569	0/0:5,0:5:10.28:0,10,285	0/0:8,0:8:18.06:0,18,760	0/0:12,0:12:26.88:0,27,705	0/0:18,0:18:22.74:0,23,1356	0/0:23,0:23:37.52:0,38,1701	0/0:9,0:9:24.08:0,24,1020	0/0:7,0:7:18.06:0,18,483	0/0:6,0:6:15.05:0,15,414	0/0:11,0:11:27.08:0,27,1027	0/0:13,0:13:4.17:0,4,1044	0/0:12,0:12:33.11:0,33,1186	0/0:13,0:13:30.10:0,30,1276	0/1:11,0:11:1.45:1,0,608	0/0:29,0:28:8.57:0,9,1648	0/0:26,0:25:52.13:0,52,2603	0/0:15,0:14:7.25:0,7,854	0/1:8,0:8:10.39:10,0,354	0/0:14,0:14:33.11:0,33,919	0/0:5,0:5:6.02:0,6,166	0/0:8,0:8:21.07:0,21,801	0/0:25,0:25:69.23:0,69,2660	0/0:5,0:5:12.04:0,12,314	0/1:8,0:8:4.55:5,0,489	0/0:8,0:8:17.90:0,18,631	0/0:8,0:8:24.08:0,24,778
chr10	84798291	.	ATGTG	A	3175.25	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=8.854;DP=305;FS=14.093;HRun=0;HaplotypeScore=71.8924;InbreedingCoeff=0.9338;MQ=100.44;MQ0=0;MQRankSum=-9.008;QD=32.40;ReadPosRankSum=3.416;VQSLOD=2.6318;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:48.16:0,48,1344	0/0:1,0:1:3.01:0,3,67	0/0:18,0:18:54.13:0,54,1172	0/0:18,0:18:48.07:0,48,996	0/0:11,0:11:33.11:0,33,955	1/1:4,12:16:24.08:431,24,0	1/1:4,9:13:24.08:431,24,0	1/1:8,0:15:15.82:367,16,0	0/0:11,0:11:33.10:0,33,893	0/0:6,0:6:18.06:0,18,394	0/0:4,0:4:12.04:0,12,264	0/0:7,0:7:21.07:0,21,590	0/0:11,0:11:33.11:0,33,938	0/0:7,0:7:21.06:0,21,546	0/0:11,0:11:30.10:0,30,851	0/0:9,0:9:27.09:0,27,593	0/0:18,0:18:51.15:0,51,1070	0/0:20,0:19:60.18:0,60,1651	1/1:3,0:7:9.03:162,9,0	1/1:1,0:6:14.91:269,15,0	./.	1/1:0,0:2:6.02:108,6,0	0/0:9,0:9:27.08:0,27,699	0/0:15,0:15:42.12:0,42,1132	1/1:0,8:8:18.06:324,18,0	1/1:2,8:10:24.08:431,24,0	1/1:2,0:10:21.07:377,21,0	1/1:2,9:11:27.09:485,27,0
chr10	84798296	.	AG	A	435.80	PASS	AB=0.749;AC=17;AF=0.315;AN=54;BaseQRankSum=11.167;DP=301;FS=8.398;HRun=1;HaplotypeScore=61.3524;InbreedingCoeff=0.5991;MQ=97.72;MQ0=0;MQRankSum=-7.677;QD=4.74;ReadPosRankSum=3.086;VQSLOD=0.3689;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:48.16:0,48,765	0/0:1,0:1:3.01:0,3,48	0/0:17,0:17:48.16:0,48,746	0/0:16,0:16:45.12:0,45,651	0/0:12,0:12:36.12:0,36,572	0/1:15,0:15:8.46:17,0,8	1/1:12,0:12:0.79:18,1,0	1/1:1,7:8:1.14:124,1,0	0/0:12,0:12:36.12:0,36,572	0/0:6,0:6:18.06:0,18,288	0/0:4,0:4:12.04:0,12,192	0/0:7,0:7:21.07:0,21,336	0/0:13,0:13:39.12:0,39,599	0/0:7,0:7:21.07:0,21,331	0/0:11,0:11:30.10:0,30,480	0/0:9,0:9:27.09:0,27,432	0/0:18,0:18:54.18:0,54,862	0/0:23,0:22:69.21:0,69,1072	0/1:4,4:8:40.54:48,0,41	1/1:3,5:8:23.12:148,23,0	./.	1/1:0,2:2:5.88:36,6,0	0/0:8,0:8:24.08:0,24,383	0/0:15,0:15:42.14:0,42,671	1/1:8,0:8:9.33:24,9,0	1/1:11,0:11:15.55:40,16,0	0/1:3,8:11:28.11:121,0,28	1/1:9,0:9:13.99:36,14,0
chr10	84798992	.	C	CTCT	15709.15	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-2.902;DP=634;FS=6.020;HRun=0;HaplotypeScore=97.5170;InbreedingCoeff=0.9670;MQ=80.51;MQ0=0;MQRankSum=-4.042;QD=47.03;ReadPosRankSum=0.690;VQSLOD=6.9222;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1821	1/1:0,1:2:3.01:66,3,0	0/0:24,0:24:57.19:0,57,883	0/0:30,0:29:70.78:0,71,1047	0/0:24,0:24:66.20:0,66,975	1/1:2,11:14:24.08:524,24,0	1/1:3,26:32:69.24:1498,69,0	1/1:6,16:24:57.18:1177,57,0	0/0:22,0:22:63.20:0,63,972	1/1:7,23:31:81.28:1721,81,0	1/1:1,11:12:30.02:564,30,0	0/0:29,0:29:81.28:0,81,1274	0/0:20,0:20:48.14:0,48,735	0/0:28,0:28:75.24:0,75,1166	0/0:20,0:20:60.20:0,60,951	1/1:2,31:33:78.12:1704,78,0	1/1:5,26:31:72.25:1562,72,0	0/0:17,0:17:42.14:0,42,648	1/1:2,12:14:33.11:719,33,0	1/1:2,13:14:27.09:588,27,0	1/1:10,24:34:46.83:942,47,0	1/1:2,20:22:45.11:936,45,0	0/0:14,0:14:33.11:0,33,521	0/0:33,0:33:96.28:0,96,1492	1/1:0,11:11:27.05:544,27,0	1/1:1,21:23:63.20:1311,63,0	1/1:5,25:32:78.22:1656,78,0	1/1:1,3:4:9.03:197,9,0
chr10	84799275	.	A	AGAAGGAAGAAAGGAAG	29738.57	PASS	AB=0.718;AC=34;AF=0.607;AN=56;BaseQRankSum=-3.454;DP=780;FS=20.705;HRun=0;HaplotypeScore=269.6870;InbreedingCoeff=0.8290;MQ=58.55;MQ0=1;MQRankSum=-9.008;QD=60.57;ReadPosRankSum=-6.222;VQSLOD=2.3648;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:42:99:915,0,324	1/1:2,6:8:3.90:234,4,0	0/0:30,0:25:59.76:0,60,773	0/0:25,0:19:14.86:0,15,493	0/1:18,0:28:7.43:7,0,539	1/1:13,0:41:36.12:1888,36,0	1/1:30,0:30:77.90:993,78,0	1/1:33,0:30:70.41:1434,70,0	0/0:25,0:25:63.18:0,63,2429	1/1:11,21:37:96.05:3274,96,0	1/1:4,16:20:35.66:933,36,0	0/0:29,0:29:81.14:0,81,2453	0/0:37,0:38:99:0,102,3713	0/0:19,0:19:51.13:0,51,1813	0/0:44,0:44:99:0,123,4080	1/1:12,13:27:45.15:3103,45,0	1/1:8,11:23:24.08:1511,24,0	0/0:26,0:26:63.57:0,64,1689	1/1:13,9:24:60.12:2327,60,0	1/1:9,14:22:35.95:1715,36,0	1/1:4,11:21:9.01:370,9,0	1/1:8,20:34:47.84:2047,48,0	0/0:18,0:18:42.05:0,42,1416	0/0:35,0:35:99:0,99,3338	1/1:12,0:22:24.08:1165,24,0	1/1:10,17:29:70.34:2682,70,0	1/1:17,17:39:60.21:4213,60,0	1/1:4,2:9:18.06:927,18,0
chr10	84799755	.	GGACC	G	3104.53	PASS	AB=0.543;AC=9;AF=0.161;AN=56;BaseQRankSum=13.085;DP=656;FS=12.600;HRun=0;HaplotypeScore=128.9046;InbreedingCoeff=0.8664;MQ=79.35;MQ0=0;MQRankSum=-11.159;QD=34.88;ReadPosRankSum=2.623;VQSLOD=3.4149;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,3399	1/1:0,8:8:21.07:337,21,0	0/0:21,0:21:54.19:0,54,1403	0/0:21,0:21:57.01:0,57,1458	0/0:24,0:24:66.23:0,66,1810	0/0:28,0:28:84.26:0,84,2229	0/0:24,0:24:72.25:0,72,2013	0/0:34,0:33:96.33:0,96,2588	0/0:29,0:29:84.27:0,84,2237	1/1:2,22:24:66.20:1070,66,0	1/1:1,16:17:33.11:510,33,0	0/0:15,0:15:45.15:0,45,1205	0/0:19,0:19:54.19:0,54,1495	0/0:28,0:28:81.26:0,81,2049	0/0:23,0:23:69.24:0,69,1895	0/1:3,16:19:32.74:739,0,33	1/1:5,16:21:39.60:613,40,0	0/0:16,0:16:48.16:0,48,1343	0/0:22,0:22:66.23:0,66,1788	0/0:33,0:33:96.33:0,96,2648	0/0:30,0:30:87.30:0,87,2433	0/0:23,0:23:51.15:0,51,1292	0/0:24,0:24:69.24:0,69,1810	0/0:29,0:29:84.25:0,84,2212	0/0:14,0:14:36.12:0,36,973	0/0:24,0:24:72.25:0,72,2010	0/0:30,0:30:90.31:0,90,2462	0/0:14,0:14:39.13:0,39,1091
chr10	84799761	.	TTC	T	1903.54	PASS	AB=0.529;AC=9;AF=0.161;AN=56;BaseQRankSum=13.069;DP=636;FS=13.098;HRun=0;HaplotypeScore=105.3115;InbreedingCoeff=0.9294;MQ=80.46;MQ0=0;MQRankSum=-12.615;QD=23.50;ReadPosRankSum=2.631;VQSLOD=4.1388;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,2470	1/1:0,8:8:24:256,24,0	0/0:22,0:22:54.03:0,54,898	0/0:19,0:19:52.06:0,52,913	0/0:23,0:23:66.23:0,66,1208	0/0:29,0:28:87.28:0,87,1564	0/0:26,0:26:69.24:0,69,1265	0/0:29,0:28:78.27:0,78,1414	0/0:29,0:29:84.29:0,84,1530	1/1:5,17:22:51.14:574,51,0	1/1:1,15:16:32.85:323,33,0	0/0:14,0:14:42.14:0,42,763	0/0:17,0:17:48.15:0,48,849	0/0:23,0:23:63.19:0,63,1095	0/0:26,0:26:78.27:0,78,1386	0/1:2,16:18:0.86:504,0,1	1/1:1,16:17:38.97:411,39,0	0/0:18,0:18:54.18:0,54,956	0/0:22,0:22:63.19:0,63,1086	0/0:32,0:32:96.33:0,96,1739	0/0:30,0:30:90.27:0,90,1587	0/0:18,0:18:51.15:0,51,830	0/0:21,0:21:57.19:0,57,1025	0/0:26,0:26:75.26:0,75,1375	0/0:15,0:15:45.14:0,45,775	0/0:29,0:29:87.26:0,87,1524	0/0:28,0:28:84.29:0,84,1527	0/0:13,0:13:39.13:0,39,715
chr10	84800067	.	A	ACTGCAG	25840.59	PASS	AB=0.531;AC=31;AF=0.554;AN=56;BaseQRankSum=-10.775;DP=601;FS=2.262;HRun=0;HaplotypeScore=115.8247;InbreedingCoeff=0.9114;MQ=53.64;MQ0=2;MQRankSum=-17.939;QD=76.91;ReadPosRankSum=-1.936;VQSLOD=5.0798;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:96.33:0,96,2220	1/1:3,6:10:18.06:607,18,0	0/0:19,0:17:47.99:0,48,1040	0/0:13,0:11:30.07:0,30,636	0/0:31,0:31:90.31:0,90,2127	1/1:3,18:23:54.19:1919,54,0	1/1:6,13:18:33.11:1159,33,0	1/1:10,10:24:66.20:1716,66,0	0/0:20,0:20:60.19:0,60,1372	1/1:6,20:27:69.24:2400,69,0	1/1:3,13:16:39.13:1365,39,0	0/0:25,0:25:75.26:0,75,1733	0/0:25,0:25:75.26:0,75,1735	0/0:25,0:25:75.26:0,75,1774	0/0:29,0:29:87.28:0,87,2011	1/1:6,18:26:63.22:2161,63,0	1/1:9,9:20:39.13:1354,39,0	0/0:10,0:10:24.08:0,24,567	1/1:11,14:25:69.24:2289,69,0	0/1:2,11:17:35.10:1136,0,35	1/1:6,7:15:21.07:746,21,0	1/1:3,19:23:57.20:2011,57,0	0/0:17,0:17:51.16:0,51,1158	0/0:18,0:18:51.18:0,51,1191	1/1:5,22:26:63.22:2224,63,0	1/1:1,17:20:60.18:2029,60,0	1/1:8,20:30:72.25:2510,72,0	1/1:2,1:3:6.02:213,6,0
chr10	84800993	.	A	AC	1730.14	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-6.211;DP=414;FS=0.000;HRun=8;HaplotypeScore=49.1044;InbreedingCoeff=0.8985;MQ=82.80;MQ0=0;MQRankSum=-2.610;QD=20.12;ReadPosRankSum=2.688;VQSLOD=3.4291;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,18:23:48.14:554,48,0	1/1:0,7:7:21.06:240,21,0	0/0:20,0:19:35.92:0,36,340	0/0:18,0:16:32.73:0,33,262	0/0:20,0:20:51.02:0,51,463	0/0:18,0:18:38.95:0,39,346	0/0:12,0:12:20.97:0,21,185	0/0:26,1:27:47.97:0,48,422	0/0:8,0:8:21:0,21,192	1/1:2,6:8:17.96:181,18,0	1/1:2,3:5:9.03:103,9,0	0/1:7,0:7:5.81:6,0,95	0/0:10,0:10:29.93:0,30,260	0/0:17,0:17:41.97:0,42,372	0/0:20,0:20:45.01:0,45,408	1/1:2,9:11:18.05:208,18,0	1/1:7,18:25:54.16:623,54,0	0/0:20,0:20:56.99:0,57,511	0/0:20,0:20:54:0,54,487	0/0:13,0:13:30:0,30,269	0/0:30,0:30:65.92:0,66,582	0/0:10,0:10:30.02:0,30,274	0/0:7,0:7:18:0,18,165	0/0:12,0:12:33.01:0,33,302	0/0:15,0:15:41.99:0,42,372	0/0:13,0:13:30.01:0,30,274	0/0:11,0:11:28.26:0,28,250	0/0:7,0:7:18:0,18,165
chr10	84801193	.	T	TA	544.04	PASS	AB=0.816;AC=9;AF=0.167;AN=54;BaseQRankSum=2.138;DP=207;FS=0.000;HRun=3;HaplotypeScore=40.3910;InbreedingCoeff=0.3193;MQ=57.25;MQ0=11;MQRankSum=-3.592;QD=12.65;ReadPosRankSum=-0.214;VQSLOD=1.7414;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,1:8:26.84:27,0,126	1/1:1,1:2:6.02:79,6,0	0/0:2,0:2:3:0,3,36	0/0:3,0:2:5.99:0,6,57	0/0:13,0:13:36.10:0,36,420	0/0:9,0:8:10.85:0,11,109	0/0:4,0:4:11.77:0,12,102	0/0:32,0:29:79.18:0,79,927	0/0:2,0:2:6.02:0,6,72	0/1:3,2:5:44.58:103,0,45	1/1:2,2:4:8.98:97,9,0	0/0:4,0:4:12.04:0,12,144	0/0:3,0:3:9.03:0,9,105	0/0:1,0:1:3.01:0,3,36	0/0:7,0:7:21.06:0,21,252	1/1:2,1:3:5.99:78,6,0	0/1:16,4:18:99:298,0,186	0/0:17,0:15:39.10:0,39,455	0/0:13,0:10:18.90:0,19,193	./.	0/0:3,0:3:3.01:0,3,36	0/0:3,0:3:3.01:0,3,33	0/0:2,0:2:6.02:0,6,72	0/0:4,0:4:12.04:0,12,144	0/0:7,0:7:18.34:0,18,181	0/0:7,0:7:15.93:0,16,182	0/0:6,0:5:13.28:0,13,145	0/0:18,0:16:29.38:0,29,329
chr10	84801198	.	AAATAAAAT	A	2476	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=1.284;DP=225;FS=3.051;HRun=0;HaplotypeScore=63.3818;InbreedingCoeff=0.2736;MQ=58.23;MQ0=10;MQRankSum=6.550;QD=22.72;ReadPosRankSum=-2.864;VQSLOD=1.7273;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:7:11.85:0,12,216	0/0:2,0:2:4.57:0,5,81	0/0:2,0:2:6.02:0,6,106	0/0:4,0:2:6.02:0,6,102	0/0:13,0:13:39.13:0,39,826	0/1:9,0:8:22.73:23,0,273	0/0:5,0:5:5.15:0,5,27	0/1:39,0:36:99:1095,0,289	0/0:3,0:3:9.03:0,9,235	0/0:6,0:6:8.05:0,8,167	0/0:5,0:5:3.16:0,3,10	0/0:4,0:4:12.03:0,12,180	0/0:4,0:4:9.03:0,9,243	0/0:2,0:2:6.02:0,6,187	0/0:7,0:7:21.07:0,21,522	0/0:3,0:3:1.55:0,2,5	0/0:20,0:19:34.96:0,35,473	0/0:18,0:16:45.15:0,45,1248	1/1:6,6:10:4.37:276,4,0	1/1:4,0:4:9.03:111,9,0	0/0:3,0:3:2.92:0,3,17	1/1:4,0:4:12.03:136,12,0	0/0:3,0:3:9.03:0,9,233	0/0:4,0:4:12.04:0,12,287	0/1:8,0:8:99:219,0,153	0/1:9,0:9:95.18:250,0,95	1/1:6,0:5:12.04:187,12,0	0/1:18,0:16:99:337,0,300
chr10	84801201	.	TA	T	1179.40	PASS	AB=0.889;AC=23;AF=0.411;AN=56;BaseQRankSum=8.160;DP=248;FS=2.936;HRun=4;HaplotypeScore=45.0592;InbreedingCoeff=0.6169;MQ=65.21;MQ0=9;MQRankSum=1.079;QD=7.97;ReadPosRankSum=2.443;VQSLOD=0.4525;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:8:17.98:0,18,223	1/1:1,1:2:6.02:68,6,0	0/0:4,0:4:9.02:0,9,106	0/0:5,0:3:6.02:0,6,82	0/0:17,0:17:51.15:0,51,671	1/1:6,2:7:9.67:78,10,0	0/0:5,0:5:10.80:0,11,117	0/1:43,0:41:63.15:63,0,127	0/0:3,0:3:9.03:0,9,123	0/1:4,4:8:15.26:190,0,15	1/1:0,5:5:15.04:170,15,0	0/0:4,0:4:12.04:0,12,163	0/0:4,0:4:9.03:0,9,123	0/0:3,0:3:9.01:0,9,107	0/0:8,0:8:24.08:0,24,328	1/1:1,2:3:9.03:104,9,0	1/1:12,7:18:14.25:399,14,0	0/0:18,0:17:48.08:0,48,612	0/1:12,0:10:11.40:11,0,43	0/0:5,0:5:5.19:0,5,13	1/1:5,0:5:1.25:3,1,0	0/0:7,0:7:6.94:0,7,22	0/0:4,0:4:12.04:0,12,164	0/0:4,0:4:12.04:0,12,164	1/1:10,0:10:20.84:97,21,0	1/1:8,1:9:11.14:61,11,0	1/1:7,0:6:10.22:29,10,0	1/1:16,1:16:26.39:102,26,0
chr10	84801202	.	AAAAT	A	3169.28	PASS	AB=0.891;AC=18;AF=0.321;AN=56;BaseQRankSum=2.273;DP=253;FS=0.611;HRun=0;HaplotypeScore=51.9746;InbreedingCoeff=0.5266;MQ=65.33;MQ0=8;MQRankSum=4.988;QD=24.95;ReadPosRankSum=-1.642;VQSLOD=2.8692;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:8:18.06:0,18,257	0/0:3,0:3:7.57:0,8,73	0/0:4,0:4:12.04:0,12,196	0/0:5,0:3:9:0,9,123	0/0:18,0:18:51.17:0,51,887	0/1:6,0:8:23.06:23,0,66	1/1:5,0:5:6.49:92,6,0	1/1:11,31:41:93.30:1389,93,0	0/0:4,0:4:12.04:0,12,214	0/0:9,0:9:14.06:0,14,156	0/0:5,0:5:3.16:0,3,10	0/0:4,0:4:12.03:0,12,180	0/0:4,0:4:8.98:0,9,149	0/0:3,0:3:9.03:0,9,183	0/0:8,0:8:24.08:0,24,473	0/0:3,0:3:1.55:0,2,4	0/0:18,0:17:20.75:0,21,145	0/0:18,0:17:45.15:0,45,827	1/1:11,1:10:21.07:327,21,0	1/1:0,5:5:9.03:111,9,0	1/1:0,5:5:3.01:54,3,0	1/1:0,7:7:12.03:136,12,0	0/0:6,0:6:18.06:0,18,300	0/0:5,0:5:15.05:0,15,266	0/1:8,0:10:17.94:306,0,18	0/1:2,7:9:9.09:292,0,9	1/1:6,0:6:18.06:281,18,0	0/1:13,0:16:30.10:343,0,30
chr10	84801206	.	T	TA	1228.84	PASS	AB=0.897;AC=15;AF=0.268;AN=56;BaseQRankSum=5.024;DP=260;FS=1.975;HRun=4;HaplotypeScore=46.6510;InbreedingCoeff=0.6990;MQ=68.39;MQ0=2;MQRankSum=3.369;QD=11.07;ReadPosRankSum=-0.271;VQSLOD=0.8159;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:18.05:0,18,213	0/0:4,0:4:11.90:0,12,114	0/0:5,0:5:15.03:0,15,168	0/0:5,0:3:8.99:0,9,93	0/0:22,0:22:57.16:0,57,672	0/1:5,4:9:9.76:121,0,10	0/0:5,0:5:13.85:0,14,64	1/1:38,0:37:81.76:495,82,0	0/0:4,0:4:12.04:0,12,144	0/0:10,0:10:30.05:0,30,310	0/0:6,0:6:18.01:0,18,163	0/0:7,0:7:18.03:0,18,192	0/0:4,0:4:12.04:0,12,143	0/0:4,0:4:12.04:0,12,143	0/0:10,0:10:27.08:0,27,324	0/0:3,0:3:9.01:0,9,85	0/0:15,0:15:39.02:0,39,363	0/0:18,0:17:45.13:0,45,529	1/1:10,0:10:11.56:53,12,0	1/1:5,0:5:4.05:9,4,0	0/0:6,0:6:1.82:0,2,5	0/1:7,0:7:0.06:29,0,0	0/0:8,0:8:24.03:0,24,261	0/0:5,0:5:15.05:0,15,180	1/1:11,2:13:31.10:218,31,0	0/1:8,0:8:6.06:149,0,6	1/1:6,0:6:15.43:60,15,0	1/1:11,4:15:39.02:277,39,0
chr10	84801752	.	G	GT	1099.23	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.950;DP=665;FS=6.081;HRun=9;HaplotypeScore=61.3057;InbreedingCoeff=0.9707;MQ=73.60;MQ0=0;MQRankSum=-1.846;QD=23.90;ReadPosRankSum=3.605;VQSLOD=4.5634;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,44:46:99:1194,108,0	0/0:7,0:7:17.99:0,18,156	0/0:24,0:24:26.59:0,27,277	0/0:16,0:14:32.98:0,33,286	0/0:33,0:33:82.49:0,82,699	0/0:23,0:23:59.98:0,60,521	0/0:21,0:21:53.98:0,54,469	0/0:32,0:32:83.94:0,84,722	0/0:29,0:29:74.93:0,75,646	0/0:25,0:25:61.77:0,62,521	0/0:15,0:15:29.99:0,30,260	0/0:29,2:31:38.77:0,39,559	0/0:23,0:23:59.95:0,60,512	0/0:20,0:20:50.96:0,51,442	0/0:38,0:38:89.96:0,90,781	0/0:24,0:24:65.92:0,66,565	0/0:27,0:27:65.92:0,66,558	0/0:17,0:17:47.99:0,48,417	0/0:20,0:20:47.71:0,48,407	0/0:29,0:29:74.35:0,74,618	0/0:25,0:25:59.98:0,60,521	0/0:11,0:11:14.03:0,14,192	0/0:19,0:19:47.95:0,48,412	0/0:24,0:24:65.96:0,66,570	0/0:18,0:18:47.95:0,48,406	0/0:28,0:28:77.97:0,78,674	0/0:26,0:26:68.98:0,69,598	0/0:14,0:14:32.98:0,33,286
chr10	84802362	.	TA	T	4453.69	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=11.029;DP=542;FS=5.492;HRun=9;HaplotypeScore=69.9616;InbreedingCoeff=0.9581;MQ=67.75;MQ0=1;MQRankSum=-6.941;QD=23.08;ReadPosRankSum=-1.288;VQSLOD=5.3182;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:81.20:0,81,919	0/0:19,0:19:48.12:0,48,541	0/0:23,0:18:13.14:0,13,369	0/0:11,0:9:6.79:0,7,100	0/0:30,0:29:81.23:0,81,926	1/1:5,13:18:39.01:356,39,0	1/1:1,17:18:48.03:439,48,0	1/1:7,20:26:60:544,60,0	0/0:18,0:18:48.13:0,48,543	0/0:20,0:20:51.15:0,51,588	0/0:29,0:29:52.15:0,52,808	0/0:14,0:14:39.12:0,39,450	0/0:10,0:10:27.07:0,27,303	0/0:20,0:20:45.13:0,45,517	0/0:15,0:15:42.11:0,42,475	0/0:19,0:19:42.11:0,42,475	0/0:24,1:25:29.66:0,30,571	0/0:20,0:20:54.08:0,54,592	1/1:5,14:19:45.01:408,45,0	1/1:3,20:23:60.01:544,60,0	1/1:0,9:9:27.01:247,27,0	1/1:1,16:17:51.03:466,51,0	0/0:23,0:24:62.99:0,63,696	0/0:19,0:19:45.09:0,45,502	1/1:0,14:14:42.02:384,42,0	1/1:5,20:25:63.02:572,63,0	1/1:3,18:21:51.02:466,51,0	1/1:0,2:2:3:27,3,0
chr10	84802401	.	GA	G	7127.38	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=13.223;DP=556;FS=11.078;HRun=8;HaplotypeScore=68.8675;InbreedingCoeff=0.9725;MQ=54.85;MQ0=9;MQRankSum=-2.582;QD=22.63;ReadPosRankSum=0.188;VQSLOD=4.7174;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:69.20:0,69,820	1/1:0,13:13:33.05:319,33,0	0/0:24,0:10:24.06:0,24,272	0/0:24,0:8:6.77:0,7,120	0/0:34,0:33:87.25:0,87,1037	1/1:1,19:20:54.09:521,54,0	1/1:6,13:19:36.03:341,36,0	1/1:9,16:23:56.08:529,56,0	0/0:14,0:14:33.10:0,33,398	1/1:3,12:15:33.05:319,33,0	1/1:3,25:28:72.11:695,72,0	0/0:10,0:10:30.09:0,30,362	0/0:12,0:12:24.07:0,24,290	0/0:18,0:18:45.13:0,45,533	0/0:18,0:18:51.14:0,51,600	1/1:0,17:17:45.07:435,45,0	1/1:3,20:23:42.07:406,42,0	0/0:17,0:17:41.57:0,42,538	1/1:5,8:13:8.14:238,8,0	1/1:3,23:26:60.09:579,60,0	1/1:1,5:6:12.02:115,12,0	1/1:3,19:22:48.07:462,48,0	0/0:24,0:24:63.19:0,63,761	0/0:17,0:17:45.14:0,45,539	1/1:1,16:16:42.07:405,42,0	1/1:6,25:30:75.11:723,75,0	1/1:3,25:27:72.11:694,72,0	1/1:0,12:12:36.06:348,36,0
chr10	84802500	.	GAA	G	3663.27	PASS	AB=0.693;AC=31;AF=0.554;AN=56;BaseQRankSum=1.278;DP=602;FS=11.683;HRun=16;HaplotypeScore=96.4893;InbreedingCoeff=0.7396;MQ=52.05;MQ0=20;MQRankSum=2.202;QD=9.61;ReadPosRankSum=1.857;VQSLOD=1.1813;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,22:42:55.51:606,56,0	1/1:4,4:8:11.91:99,12,0	0/0:36,0:6:4.99:0,5,39	0/0:29,0:8:4.32:0,4,35	0/0:22,0:22:35.68:0,36,372	1/1:3,2:17:22.26:119,22,0	1/1:20,0:32:34.58:170,35,0	0/1:20,5:26:38.78:162,0,39	0/0:16,0:16:28.42:0,28,260	1/1:11,12:23:21.52:251,22,0	1/1:9,5:15:19.27:193,19,0	0/0:21,0:21:40.99:0,41,411	0/0:12,0:12:22.97:0,23,245	0/0:19,0:21:49.35:0,49,443	0/0:10,0:11:24.05:0,24,286	1/1:10,8:18:30.54:308,31,0	1/1:22,11:34:48.61:390,49,0	0/0:14,0:18:39.97:0,40,385	1/1:13,7:21:6.79:208,7,0	1/1:13,11:24:37.33:312,37,0	1/1:9,3:12:10.60:105,11,0	0/1:11,9:21:8.07:180,0,8	0/0:15,0:14:36.21:0,36,428	0/0:14,0:16:25.93:0,26,278	1/1:6,1:15:5.30:87,5,0	1/1:9,0:24:47.13:223,47,0	0/1:13,14:27:0.51:191,0,1	1/1:8,0:10:9.35:59,9,0
chr10	84802899	.	AC	A	8952.99	PASS	AB=0.875;AC=23;AF=0.411;AN=56;BaseQRankSum=14.845;DP=641;FS=2.381;HRun=1;HaplotypeScore=59.2392;InbreedingCoeff=0.9175;MQ=56.26;MQ0=6;MQRankSum=3.661;QD=36.69;ReadPosRankSum=-1.008;VQSLOD=4.6521;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1451	0/1:6,1:7:20.92:21,0,216	0/0:22,0:14:42.14:0,42,671	0/0:23,0:14:39.13:0,39,597	0/0:19,0:19:57.19:0,57,906	1/1:0,12:12:33.11:462,33,0	1/1:0,30:30:87.29:1217,87,0	1/1:1,40:40:99:1618,117,0	0/0:22,0:22:66.23:0,66,1053	0/0:18,0:18:54.18:0,54,842	0/0:16,0:16:45.15:0,45,719	0/0:17,0:17:51.17:0,51,813	0/0:26,0:26:75.26:0,75,1199	0/0:18,0:18:54.18:0,54,863	0/0:26,0:26:78.25:0,78,1221	0/0:37,0:37:99:0,111,1753	0/0:35,0:35:99:0,102,1603	0/0:31,0:31:84.22:0,84,1280	1/1:1,17:17:39.11:528,39,0	1/1:0,17:17:45.15:629,45,0	1/1:0,32:32:93.31:1301,93,0	1/1:0,16:16:45.15:629,45,0	0/0:17,0:17:48.15:0,48,742	0/0:36,0:36:99:0,105,1654	1/1:0,15:15:42.14:587,42,0	1/1:1,19:20:9.20:703,9,0	1/1:0,27:26:72.24:1007,72,0	1/1:0,9:9:18.06:252,18,0
chr10	84803138	.	TA	T	2100.21	PASS	AB=1.000;AC=29;AF=0.558;AN=52;BaseQRankSum=7.973;DP=255;FS=2.186;HRun=9;HaplotypeScore=33.9288;InbreedingCoeff=0.7922;MQ=51.41;MQ0=13;MQRankSum=0.289;QD=14.10;ReadPosRankSum=-2.453;VQSLOD=2.2432;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:15:19.88:0,20,185	1/1:0,3:3:9:82,9,0	0/0:13,0:4:6.02:0,6,65	0/1:6,0:3:3.02:3,0,29	0/0:14,0:14:33.10:0,33,381	1/1:1,7:7:17.96:156,18,0	./.	1/1:7,10:4:2.96:20,3,0	0/0:5,0:5:9.03:0,9,104	1/1:1,12:9:24.01:220,24,0	1/1:0,5:4:12.01:110,12,0	0/0:6,0:6:12.04:0,12,139	0/0:4,0:4:9.02:0,9,96	0/0:3,0:3:6.02:0,6,69	0/0:7,0:7:18.05:0,18,208	1/1:3,4:7:12:110,12,0	1/1:6,20:25:59.99:539,60,0	0/0:21,2:23:26.72:0,27,561	1/1:2,7:6:11.97:103,12,0	1/1:2,4:6:14.99:132,15,0	1/1:1,3:4:6:55,6,0	./.	0/0:9,0:9:21.06:0,21,239	0/0:2,0:2:6.02:0,6,69	1/1:5,8:11:20.98:182,21,0	1/1:3,3:4:6:52,6,0	1/1:3,13:14:21.44:287,21,0	1/1:0,10:9:27.01:247,27,0
chr10	84803157	.	C	CAAAT	664.51	PASS	AB=0.935;AC=7;AF=0.184;AN=38;BaseQRankSum=-1.325;DP=218;FS=5.420;HRun=0;HaplotypeScore=52.1999;InbreedingCoeff=0.0200;MQ=50.45;MQ0=11;MQRankSum=-1.877;QD=6.65;ReadPosRankSum=-2.599;VQSLOD=-0.0487;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:1.95:2,0,127	0/0:2,0:2:3:0,3,25	./.	./.	0/0:10,0:10:6.02:0,6,91	0/0:8,0:7:9.08:0,9,25	./.	0/1:20,0:8:2.88:94,0,3	0/0:3,0:3:6.02:0,6,93	0/1:10,1:8:55.59:56,0,128	0/0:3,0:3:6.02:0,6,71	0/0:3,0:3:6.02:0,6,94	0/0:3,0:3:3.01:0,3,47	./.	0/0:6,0:6:3.01:0,3,47	0/0:4,0:4:6.02:0,6,69	0/1:21,10:30:99:584,0,283	0/0:18,0:18:30.08:0,30,446	./.	./.	./.	./.	0/0:8,0:8:9.03:0,9,140	./.	0/1:10,0:8:5.66:13,0,6	0/0:6,0:4:7.27:0,7,20	1/1:13,0:11:2.98:22,3,0	0/0:13,0:12:5.45:0,5,15
chr10	84803190	.	AAAT	A	2518.26	PASS	AB=1.000;AC=14;AF=0.304;AN=46;BaseQRankSum=-2.393;DP=214;FS=14.737;HRun=0;HaplotypeScore=56.1683;InbreedingCoeff=0.3240;MQ=48.38;MQ0=8;MQRankSum=-3.217;QD=22.09;ReadPosRankSum=-6.988;VQSLOD=-0.0328;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:12:13.09:0,13,368	0/0:1,0:1:3.01:0,3,41	./.	./.	0/0:5,0:5:12.04:0,12,177	0/1:9,0:9:99:103,0,112	./.	1/1:7,28:29:78.22:1058,78,0	0/0:3,0:3:9.03:0,9,164	0/0:8,0:8:21.33:0,21,263	0/0:3,0:3:6.01:0,6,82	0/0:3,0:3:9.03:0,9,170	0/0:1,0:1:3.01:0,3,66	0/0:1,0:1:3.01:0,3,37	0/0:2,0:2:3.01:0,3,66	0/0:2,0:2:6.02:0,6,80	0/0:33,0:31:84.08:0,84,1135	0/0:16,0:16:45.15:0,45,868	1/1:1,15:13:36.11:481,36,0	1/1:2,0:2:3.01:42,3,0	1/1:2,0:2:6.02:84,6,0	./.	0/0:3,0:3:9.03:0,9,193	./.	0/1:12,0:9:9.57:10,0,79	0/1:7,0:7:86.39:106,0,86	1/1:2,1:2:2.98:22,3,0	0/1:28,0:28:12.39:761,0,12
chr10	84803193	.	T	TA	3504.78	PASS	AC=18;AF=0.391;AN=46;BaseQRankSum=0.108;DP=219;FS=27.125;HRun=3;HaplotypeScore=42.1572;InbreedingCoeff=0.7165;MQ=48.43;MQ0=8;MQRankSum=-4.255;QD=29.70;ReadPosRankSum=-1.639;VQSLOD=1.3247;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:13:9:0,9,277	0/0:1,0:1:2.88:0,3,15	./.	./.	0/0:4,0:4:12.04:0,12,148	1/1:2,8:10:24.08:338,24,0	./.	1/1:30,2:27:78.21:1037,78,0	0/0:3,0:3:9.03:0,9,112	0/0:8,0:8:14.43:0,14,83	0/0:3,0:3:5.74:0,6,30	0/0:3,0:3:9.03:0,9,112	0/0:1,0:1:3.01:0,3,37	0/0:1,0:1:3.01:0,3,37	0/0:2,0:2:3.01:0,3,37	0/0:2,0:2:5.68:0,6,28	0/0:33,0:31:34.63:0,35,330	0/0:15,0:15:45.13:0,45,546	1/1:16,0:13:36.11:481,36,0	1/1:1,1:2:3.01:41,3,0	1/1:0,2:2:6.02:81,6,0	./.	0/0:3,0:3:9.03:0,9,112	./.	1/1:2,10:9:20.86:279,21,0	1/1:0,7:7:21.07:295,21,0	1/1:2,1:2:2.98:22,3,0	1/1:4,30:34:69.23:931,69,0
chr10	84803366	.	TA	T	80.23	PASS	AB=0.609;AC=1;AF=0.018;AN=56;BaseQRankSum=0.658;DP=233;FS=0.000;HRun=8;HaplotypeScore=39.1773;InbreedingCoeff=-0.0371;MQ=54.85;MQ0=6;MQRankSum=0.548;QD=5.73;ReadPosRankSum=0.585;VQSLOD=-0.5060;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:5,9:12:12.63:154,0,13	0/0:1,0:1:3.01:0,3,36	0/0:8,0:4:11.82:0,12,114	0/0:9,0:2:6:0,6,59	0/0:3,0:3:9.02:0,9,97	0/0:14,0:14:33.10:0,33,398	0/0:5,0:5:15.05:0,15,181	0/0:32,0:29:84.21:0,84,989	0/0:3,0:3:8.86:0,9,87	0/0:5,0:5:15.05:0,15,181	0/0:7,0:7:18.06:0,18,217	0/0:3,0:4:11.90:0,12,123	0/0:4,0:4:11.87:0,12,123	0/0:4,0:4:12.04:0,12,145	0/0:2,0:2:6.02:0,6,72	0/0:3,0:3:9.03:0,9,109	0/0:27,0:27:45.14:0,45,542	0/0:21,0:22:60.03:0,60,691	0/0:25,0:20:60.18:0,60,725	0/0:8,0:8:17.92:0,18,181	0/0:5,0:5:15.05:0,15,181	0/0:1,0:1:3.01:0,3,36	0/0:1,0:1:3.01:0,3,36	0/0:3,0:3:9.01:0,9,96	0/0:9,0:6:14.98:0,15,163	0/0:5,0:3:9.03:0,9,109	0/0:5,0:4:11.97:0,12,127	0/0:4,0:4:9.03:0,9,109
chr10	84803384	.	C	CAAATAAAT	972.53	PASS	AB=0.875;AC=10;AF=0.227;AN=44;BaseQRankSum=-3.393;DP=227;FS=0.000;HRun=0;HaplotypeScore=75.5613;InbreedingCoeff=0.3740;MQ=54.34;MQ0=7;MQRankSum=-3.055;QD=14.09;ReadPosRankSum=-0.100;VQSLOD=1.9381;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:10:33.55:34,0,211	./.	./.	./.	0/0:2,0:2:6.02:0,6,151	0/0:15,0:15:5.93:0,6,289	0/0:5,0:5:3.01:0,3,31	0/0:35,0:28:8.22:0,8,61	0/0:3,0:3:3.01:0,3,75	1/1:2,1:4:5.99:145,6,0	1/1:6,0:6:2.97:20,3,0	0/0:5,0:5:6.02:0,6,89	0/0:5,0:5:9.03:0,9,226	0/0:3,0:3:6.02:0,6,151	0/0:5,0:5:9.03:0,9,226	1/1:1,2:3:6.02:246,6,0	1/1:8,11:18:15.05:615,15,0	0/0:24,0:24:60.13:0,60,1185	0/1:25,0:23:45.08:45,0,360	0/0:7,0:7:12.03:0,12,171	0/0:5,0:5:3.01:0,3,31	./.	./.	./.	0/0:10,0:7:15.03:0,15,244	0/0:5,0:3:3.01:0,3,55	0/0:7,0:6:14.98:0,15,184	0/0:7,0:7:12.04:0,12,220
chr10	84803409	.	AAATAAAT	A	3115.98	PASS	AB=0.766;AC=15;AF=0.300;AN=50;BaseQRankSum=5.971;DP=235;FS=0.629;HRun=0;HaplotypeScore=59.2016;InbreedingCoeff=0.3973;MQ=44.91;MQ0=11;MQRankSum=-7.682;QD=27.33;ReadPosRankSum=1.244;VQSLOD=3.0581;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:10:21.07:0,21,613	0/0:1,0:1:3.01:0,3,111	./.	./.	0/0:3,0:3:9.03:0,9,341	1/1:2,12:14:21.07:517,21,0	0/0:1,0:1:3.01:0,3,80	1/1:8,18:21:51.17:811,51,0	0/0:8,0:8:24.08:0,24,376	0/0:6,0:6:18.06:0,18,441	0/1:4,0:4:10.91:11,0,65	0/0:8,0:8:24.08:0,24,476	0/0:4,0:4:9.03:0,9,348	0/0:6,0:6:18.06:0,18,453	0/0:6,0:6:18.06:0,18,536	0/0:4,0:4:12.04:0,12,265	0/0:21,0:20:30.10:0,30,696	0/0:26,0:25:72.18:0,72,2324	0/1:11,12:21:99:625,0,117	0/1:2,8:9:99:136,0,148	0/1:4,0:4:67.99:114,0,68	./.	0/0:2,0:2:6.02:0,6,148	0/0:1,0:1:3.01:0,3,107	1/1:1,7:6:15.05:369,15,0	1/1:2,6:5:12.04:200,12,0	0/1:3,5:8:99:207,0,114	1/1:0,9:9:12.04:296,12,0
chr10	84803416	.	T	TA	1400.55	PASS	AB=1.000;AC=18;AF=0.360;AN=50;BaseQRankSum=5.825;DP=241;FS=3.188;HRun=3;HaplotypeScore=41.4044;InbreedingCoeff=0.6229;MQ=48.31;MQ0=10;MQRankSum=-5.885;QD=14.01;ReadPosRankSum=-0.447;VQSLOD=2.4348;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:9:8.14:0,8,175	0/0:1,0:1:3.01:0,3,37	./.	./.	0/0:5,0:5:15.03:0,15,173	1/1:14,0:13:1.61:22,2,0	1/1:0,1:1:3.01:43,3,0	1/1:23,0:18:50.87:655,51,0	0/0:10,0:10:30.09:0,30,372	0/0:10,0:10:21.94:0,22,315	0/1:5,0:5:4.89:5,0,134	0/0:10,0:10:30.08:0,30,359	0/0:3,0:3:9.03:0,9,112	0/0:7,0:7:21.07:0,21,260	0/0:8,0:8:21.07:0,21,260	0/0:8,0:8:8.28:0,8,208	0/0:17,0:16:6.32:0,6,289	0/0:26,0:25:72.14:0,72,870	1/1:13,5:17:25.75:355,26,0	1/1:8,2:9:4.35:84,4,0	1/1:0,5:5:12.04:165,12,0	./.	0/0:2,0:2:6.02:0,6,74	0/0:1,0:1:3.01:0,3,37	0/1:8,0:6:0.40:13,0,0	1/1:8,1:6:8.22:124,8,0	1/1:5,2:7:7.30:101,7,0	0/0:9,0:9:1.89:0,2,5
chr10	84804918	.	TGTGTGTGTGTGTGA	T	4647.80	PASS	AB=0.933;AC=15;AF=0.268;AN=56;BaseQRankSum=12.085;DP=523;FS=0.573;HRun=0;HaplotypeScore=235.1853;InbreedingCoeff=0.1704;MQ=59.22;MQ0=4;MQRankSum=-6.636;QD=21.82;ReadPosRankSum=0.615;VQSLOD=3.4591;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:27.05:0,27,657	0/0:7,0:7:15.05:0,15,773	0/1:22,0:14:99:143,0,448	0/1:24,0:13:8.81:9,0,567	0/0:32,0:32:78.19:0,78,3890	0/1:6,4:9:4.85:499,0,5	1/1:8,1:9:3.01:129,3,0	0/1:14,0:12:87.06:87,0,196	0/0:16,0:15:44.82:0,45,2816	0/0:22,0:22:66.20:0,66,3074	0/0:27,0:27:47.25:0,47,1809	0/0:20,0:20:50.64:0,51,2644	0/0:7,0:7:21.05:0,21,1033	0/0:13,0:13:36.10:0,36,1719	0/0:24,0:24:60.13:0,60,3067	0/0:16,0:16:36.11:0,36,1698	0/0:32,0:31:57.18:0,57,2869	0/0:23,0:22:56.53:0,57,3035	0/1:17,0:17:18.20:18,0,400	0/1:26,0:26:79.05:79,0,240	0/0:12,0:12:10.19:0,10,123	0/1:17,0:16:17.90:18,0,174	0/0:16,0:16:39.09:0,39,1822	0/0:17,0:16:37.01:0,37,2312	1/1:3,9:12:30.09:1181,30,0	0/1:14,12:26:99:1776,0,159	0/1:24,0:23:37.93:38,0,215	1/1:8,4:12:30.02:670,30,0
chr10	84804924	.	TGTGTGTGA	T	6568.01	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=13.807;DP=504;FS=3.310;HRun=0;HaplotypeScore=175.7873;InbreedingCoeff=0.7816;MQ=63.27;MQ0=1;MQRankSum=-7.239;QD=36.09;ReadPosRankSum=0.623;VQSLOD=4.3951;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:9.51:0,10,202	0/0:6,0:6:15.04:0,15,436	0/1:22,0:15:82.92:83,0,258	0/0:21,0:13:5.68:0,6,288	0/0:36,0:36:93.13:0,93,2378	1/1:7,0:7:12.04:264,12,0	1/1:8,0:8:3.01:66,3,0	1/1:14,1:14:35.97:378,36,0	0/0:16,0:15:44.82:0,45,1724	0/0:24,0:24:70.37:0,70,1793	0/0:28,0:28:50.22:0,50,1086	0/0:20,0:20:47.63:0,48,1612	0/0:7,0:7:21.05:0,21,641	0/0:13,0:13:33.07:0,33,951	0/0:23,0:23:54.14:0,54,1864	0/0:16,0:16:36.07:0,36,913	0/0:31,0:30:57.03:0,57,1632	0/0:26,0:25:64.39:0,64,1929	1/1:10,3:13:29.03:500,29,0	1/1:14,13:27:60.09:1242,60,0	1/1:9,1:10:7.25:112,7,0	1/1:9,7:16:35.94:695,36,0	0/0:13,0:13:36.07:0,36,1058	0/0:16,0:15:33.11:0,33,1377	1/1:11,0:11:30.09:618,30,0	0/1:21,0:21:81.59:926,0,82	1/1:9,13:21:54.14:1281,54,0	1/1:10,0:10:29.96:402,30,0
chr10	84804960	.	TA	T	4544.58	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=12.470;DP=511;FS=1.197;HRun=5;HaplotypeScore=117.6753;InbreedingCoeff=0.7980;MQ=64.57;MQ0=3;MQRankSum=-8.352;QD=20.94;ReadPosRankSum=-2.615;VQSLOD=2.9182;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:50.73:0,51,325	0/1:7,0:7:6.64:7,0,26	0/0:14,0:10:16.45:0,16,240	0/0:18,2:15:20.53:0,21,293	0/0:39,0:39:99:0,108,1432	1/1:0,11:10:30.09:338,30,0	1/1:1,11:13:30.08:337,30,0	1/1:9,22:28:69.12:745,69,0	0/0:13,0:13:30.07:0,30,370	0/1:27,0:23:50.01:50,0,112	0/0:25,0:25:25.84:0,26,251	0/0:23,0:23:46.33:0,46,760	0/1:14,0:13:2.42:2,0,403	0/0:18,0:18:31.30:0,31,576	0/0:20,0:20:51.14:0,51,641	0/0:12,0:12:5.48:0,5,63	0/0:30,0:30:17.17:0,17,135	0/0:22,0:22:57.15:0,57,743	1/1:2,7:9:21.02:223,21,0	1/1:7,13:18:42.09:462,42,0	1/1:0,5:5:14.91:137,15,0	1/1:1,13:15:42.05:458,42,0	0/0:16,0:14:39.04:0,39,471	0/0:8,0:6:18.06:0,18,241	1/1:1,11:12:33.09:371,33,0	1/1:5,12:16:35.30:447,35,0	1/1:2,16:19:47.65:526,48,0	1/1:0,13:15:41.99:442,42,0
chr10	84805148	.	C	CT	5399.86	PASS	AB=0.900;AC=23;AF=0.411;AN=56;BaseQRankSum=-3.360;DP=523;FS=6.525;HRun=8;HaplotypeScore=60.1135;InbreedingCoeff=0.9300;MQ=62.46;MQ0=0;MQRankSum=-2.659;QD=25.59;ReadPosRankSum=-1.700;VQSLOD=4.9946;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:81.04:0,81,741	0/1:8,1:9:10.60:11,0,168	0/0:11,0:11:29.87:0,30,244	0/0:16,0:13:20.87:0,21,183	0/0:17,0:17:45.02:0,45,412	1/1:3,12:15:33.10:381,33,0	1/1:5,15:20:45.13:519,45,0	1/1:13,17:29:45.09:505,45,0	0/0:15,0:15:33.02:0,33,301	0/0:16,0:16:42.01:0,42,383	0/0:14,0:14:36.02:0,36,329	0/0:16,0:16:48.03:0,48,439	0/0:19,0:19:48:0,48,439	0/0:18,0:18:38.96:0,39,349	0/0:23,0:23:57.03:0,57,521	0/0:15,0:15:45.02:0,45,412	0/0:40,0:40:99:0,111,1009	0/0:18,0:18:30.38:0,30,338	1/1:2,16:18:45.09:504,45,0	1/1:2,15:17:45.13:516,45,0	1/1:2,16:18:39.12:450,39,0	1/1:1,14:15:42.12:473,42,0	0/0:13,0:13:32.99:0,33,298	0/0:22,0:22:57.02:0,57,522	1/1:1,17:18:48.14:548,48,0	1/1:3,23:26:44.75:766,45,0	1/1:1,17:18:45.13:519,45,0	1/1:0,7:7:18.05:208,18,0
chr10	84805509	.	C	CTTGTT	11410.97	PASS	AB=0.909;AC=23;AF=0.411;AN=56;BaseQRankSum=-1.521;DP=668;FS=0.000;HRun=0;HaplotypeScore=124.0565;InbreedingCoeff=0.9172;MQ=71.16;MQ0=1;MQRankSum=-9.482;QD=41.34;ReadPosRankSum=-1.593;VQSLOD=4.6044;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:63.19:0,63,1162	0/1:9,1:10:63.31:63,0,369	0/0:35,0:33:25.82:0,26,637	0/0:26,0:26:21.34:0,21,287	0/0:23,0:23:45.15:0,45,853	1/1:4,13:18:24.08:672,24,0	1/1:4,1:19:12.04:263,12,0	1/1:9,19:33:72.22:1714,72,0	0/0:29,0:29:69.22:0,69,1270	0/0:27,0:27:63.20:0,63,1136	0/0:22,0:22:44.74:0,45,763	0/0:27,0:27:66.22:0,66,1209	0/0:17,0:17:45.12:0,45,795	0/0:20,0:20:57.13:0,57,1032	0/0:30,0:30:72.23:0,72,1318	0/0:24,0:24:60.21:0,60,1129	0/0:28,0:28:72.25:0,72,1361	0/0:15,0:15:33.11:0,33,633	1/1:6,17:25:57.19:1348,57,0	1/1:4,16:24:48.05:1060,48,0	1/1:9,10:22:18.01:414,18,0	1/1:7,23:31:42.14:1150,42,0	0/0:20,0:20:45.15:0,45,832	0/0:19,0:19:36.06:0,36,620	1/1:3,13:18:30.10:862,30,0	1/1:4,26:33:81.25:2114,81,0	1/1:2,23:28:45.15:1313,45,0	1/1:0,10:12:15.05:438,15,0
chr10	84805984	.	T	TCC	4648.59	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=3.657;DP=464;FS=13.496;HRun=0;HaplotypeScore=115.4619;InbreedingCoeff=0.9548;MQ=69.25;MQ0=28;MQRankSum=-6.811;QD=37.49;ReadPosRankSum=6.317;VQSLOD=6.1904;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:54.79:0,55,547	0/0:7,0:7:14.24:0,14,139	0/0:54,0:17:39.34:0,39,393	0/0:55,0:22:22.03:0,22,323	0/0:14,0:14:34.36:0,34,529	1/1:0,12:12:27.09:456,27,0	1/1:0,9:9:18.06:290,18,0	1/1:4,10:13:16.93:498,17,0	0/0:15,0:15:42.08:0,42,557	0/0:21,0:21:44.53:0,45,496	0/0:5,0:5:11.93:0,12,128	0/0:12,0:8:17.23:0,17,213	0/0:10,0:10:24.08:0,24,357	0/0:16,0:16:39.10:0,39,568	0/0:14,0:14:33.11:0,33,507	0/0:9,0:8:24.02:0,24,293	0/0:23,0:19:39.30:0,39,425	0/0:26,0:25:66.78:0,67,952	1/1:2,13:14:42.13:652,42,0	1/1:0,15:17:42.13:697,42,0	1/1:0,8:9:9.03:156,9,0	1/1:1,3:3:6.02:101,6,0	0/0:12,0:10:30.07:0,30,414	0/0:19,0:19:45.10:0,45,659	1/1:0,9:9:21.07:359,21,0	1/1:0,17:17:51.17:860,51,0	1/1:2,11:12:27.09:425,27,0	1/1:0,3:3:9.03:155,9,0
chr10	84805992	.	TTGG	T	1894.21	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=11.577;DP=404;FS=6.252;HRun=0;HaplotypeScore=97.0717;InbreedingCoeff=0.5091;MQ=64.10;MQ0=29;MQRankSum=-7.659;QD=10.58;ReadPosRankSum=1.094;VQSLOD=2.4436;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:24:56.79:57,0,387	0/1:7,0:7:9.92:10,0,101	0/0:47,1:13:15.17:0,15,151	0/0:42,0:14:5.30:0,5,143	0/0:12,0:12:30.10:0,30,524	1/1:6,3:9:25.14:196,25,0	1/1:3,3:6:12.14:118,12,0	1/1:8,2:8:18.94:133,19,0	0/0:12,0:12:32.59:0,33,521	0/1:22,0:21:99:119,0,338	0/1:5,0:5:12.08:12,0,71	0/0:12,0:7:11.01:0,11,224	0/0:10,0:10:24.05:0,24,412	0/0:16,0:16:35.29:0,35,613	0/0:16,0:16:36.09:0,36,652	0/1:7,0:6:27.74:28,0,149	0/1:22,0:18:79.42:79,0,121	0/0:25,0:24:23.08:0,23,936	1/1:8,2:9:22.05:175,22,0	1/1:9,4:13:35.60:284,36,0	1/1:2,1:3:5.74:25,6,0	1/1:3,0:2:4.35:16,4,0	0/0:12,0:10:30.09:0,30,477	0/0:20,0:20:45.54:0,46,743	1/1:6,1:7:20.79:163,21,0	1/1:10,6:16:46.12:450,46,0	1/1:10,1:10:21.98:146,22,0	1/1:3,0:3:9:89,9,0
chr10	84805997	.	TC	T	1359.97	PASS	AB=0.978;AC=31;AF=0.574;AN=54;BaseQRankSum=9.619;DP=370;FS=8.619;HRun=1;HaplotypeScore=76.8830;InbreedingCoeff=0.2812;MQ=53.97;MQ0=30;MQRankSum=-6.449;QD=5.35;ReadPosRankSum=1.936;VQSLOD=0.2074;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:14.28:14,0,126	0/1:6,0:6:1.07:1,0,14	0/1:37,2:9:12.10:39,0,12	0/0:28,1:6:2.99:0,3,40	0/0:14,0:14:16.01:0,16,172	1/1:8,0:8:23.67:154,24,0	1/1:3,0:3:8.84:55,9,0	1/1:7,0:5:10.83:65,11,0	0/0:13,0:13:21.80:0,22,265	0/1:22,1:22:68.39:117,0,68	0/1:5,0:5:13.38:13,0,24	0/1:13,0:8:8.93:9,0,71	0/0:9,0:9:23.88:0,24,203	0/1:14,2:16:36.43:36,0,147	0/0:14,0:14:28.11:0,28,242	1/1:6,1:6:0.33:27,0,0	0/1:23,0:19:3.26:125,0,3	0/1:26,0:25:18.32:18,0,244	1/1:8,0:7:20.79:143,21,0	1/1:9,0:9:26.59:172,27,0	1/1:2,0:2:2.97:20,3,0	./.	0/0:14,0:12:24.19:0,24,227	0/0:20,1:21:38.73:0,39,404	1/1:7,0:7:20.70:135,21,0	1/1:16,0:15:44.35:286,44,0	1/1:5,0:4:8.76:51,9,0	1/1:3,0:3:8.89:59,9,0
chr10	84806042	.	G	GC	71.98	PASS	AB=0.876;AC=7;AF=0.219;AN=32;BaseQRankSum=4.777;DP=267;FS=19.294;HRun=0;HaplotypeScore=40.4747;InbreedingCoeff=0.0040;MQ=49.17;MQ0=36;MQRankSum=-3.682;QD=1.06;ReadPosRankSum=1.372;VQSLOD=-0.3016;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:42.14:0,42,582	0/1:7,1:7:29.82:30,0,192	./.	./.	0/0:15,0:15:39.10:0,39,508	1/1:0,1:1:3.01:48,3,0	./.	./.	0/0:15,0:15:45.15:0,45,627	0/0:17,0:17:51.17:0,51,712	0/0:11,0:11:30.06:0,30,391	0/1:8,3:9:20.71:21,0,309	0/1:13,2:15:50.05:50,0,499	0/0:9,0:9:27.08:0,27,361	0/1:8,1:8:26.29:26,0,231	0/0:11,0:11:30.10:0,30,420	0/0:17,0:15:42.14:0,42,587	0/1:22,1:23:6.64:7,0,812	./.	./.	./.	./.	0/0:13,0:13:33.11:0,33,459	0/0:14,0:14:39.13:0,39,545	./.	./.	./.	./.
chr10	84806796	.	C	CTA	3794.93	PASS	AB=0.776;AC=22;AF=0.393;AN=56;BaseQRankSum=7.127;DP=507;FS=4.032;HRun=0;HaplotypeScore=83.2841;InbreedingCoeff=0.8508;MQ=78.77;MQ0=0;MQRankSum=-2.542;QD=19.36;ReadPosRankSum=-0.899;VQSLOD=3.0323;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,102,1249	0/0:11,0:10:21.01:0,21,244	0/0:20,0:20:26.26:0,26,369	0/1:15,0:15:3.91:4,0,96	0/0:20,0:20:54.15:0,54,660	0/1:3,12:16:4.42:462,0,4	1/1:5,14:19:36.12:594,36,0	1/1:14,1:27:38.06:302,38,0	0/0:10,0:10:24.05:0,24,285	0/0:18,0:18:48.15:0,48,591	0/0:17,0:18:47.95:0,48,560	0/0:18,0:18:45.14:0,45,562	0/0:15,0:15:36.08:0,36,422	0/0:11,0:12:23.89:0,24,264	0/0:18,0:18:39.11:0,39,475	0/0:20,0:20:48.15:0,48,600	0/0:32,0:32:72.23:0,72,895	0/0:23,0:23:54.17:0,54,669	1/1:7,1:18:27.49:266,27,0	1/1:4,1:13:12.02:129,12,0	1/1:3,0:10:12:106,12,0	1/1:4,0:7:2.04:6,2,0	0/0:5,0:5:15.05:0,15,188	0/0:24,0:24:45.13:0,45,550	1/1:7,9:16:18.06:297,18,0	1/1:2,18:19:54.14:838,54,0	1/1:5,1:24:42.03:395,42,0	1/1:2,8:10:24.08:396,24,0
chr10	84806969	.	T	TAAAA	690.34	PASS	AB=0.879;AC=20;AF=0.357;AN=56;BaseQRankSum=2.374;DP=337;FS=0.682;HRun=0;HaplotypeScore=71.8473;InbreedingCoeff=0.4506;MQ=55.00;MQ0=9;MQRankSum=2.704;QD=4.90;ReadPosRankSum=-2.232;VQSLOD=1.4611;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:16.04:0,16,254	0/0:2,0:1:1.25:0,1,3	1/1:14,0:4:5.38:38,5,0	0/0:14,0:8:23.52:0,24,246	0/0:20,0:19:57.14:0,57,939	1/1:10,0:10:7:147,7,0	1/1:2,0:2:5.82:33,6,0	1/1:2,1:7:12.63:147,13,0	0/0:9,0:9:27.05:0,27,507	0/1:14,0:14:8.39:8,0,119	0/0:12,0:12:14.92:0,15,141	0/0:6,0:6:17.27:0,17,261	0/0:8,0:8:24.03:0,24,403	0/0:8,0:8:23.95:0,24,319	0/0:22,0:22:54.16:0,54,1000	0/1:18,0:17:0.14:0,0,180	0/0:27,0:27:39.58:0,40,322	0/0:24,0:24:66.18:0,66,1156	0/1:11,0:10:3.43:48,0,3	1/1:9,0:6:9.04:105,9,0	0/1:7,0:6:15.09:15,0,36	0/0:1,0:1:0.89:0,1,2	0/0:8,0:7:15.05:0,15,291	0/0:7,0:6:15.05:0,15,301	1/1:2,0:8:1.38:31,1,0	0/1:8,0:17:12.71:165,0,13	1/1:6,0:5:9:99,9,0	0/1:9,0:11:26.29:26,0,58
chr10	84807095	.	A	AGATG	14139.68	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=0.216;DP=513;FS=6.288;HRun=0;HaplotypeScore=91.2402;InbreedingCoeff=0.9907;MQ=87.44;MQ0=0;MQRankSum=-8.026;QD=45.17;ReadPosRankSum=2.876;VQSLOD=5.3189;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,17:27:39.13:985,39,0	1/1:4,9:13:24.08:597,24,0	0/0:20,0:20:36.12:0,36,622	0/0:24,0:24:54.18:0,54,916	0/0:23,0:23:57.18:0,57,957	1/1:5,13:18:33.11:829,33,0	1/1:5,7:12:24.08:584,24,0	1/1:9,11:22:29.98:462,30,0	0/0:16,0:16:30.10:0,30,514	1/1:3,15:19:45.14:1051,45,0	1/1:5,14:21:39.13:970,39,0	0/0:10,0:10:27.09:0,27,466	0/0:8,0:8:18.04:0,18,283	0/0:17,0:17:51.17:0,51,881	0/0:24,0:24:63.20:0,63,1053	1/1:4,15:19:45.15:1137,45,0	1/1:7,19:27:60.21:1516,60,0	0/0:19,0:19:51.15:0,51,851	1/1:5,9:17:36.07:754,36,0	1/1:4,8:14:15.05:379,15,0	1/1:8,30:38:60.20:1517,60,0	1/1:2,4:7:12.04:303,12,0	0/0:18,0:18:33.06:0,33,502	0/0:21,0:21:60.19:0,60,1004	1/1:3,10:14:24.08:602,24,0	1/1:4,13:18:42.10:956,42,0	1/1:1,11:13:32.94:818,33,0	1/1:3,10:13:27.09:682,27,0
chr10	84807381	.	A	AAAAAG	4217.43	PASS	AB=1.000;AC=11;AF=0.344;AN=32;BaseQRankSum=-7.123;DP=315;FS=0.569;HRun=0;HaplotypeScore=97.8388;InbreedingCoeff=0.8557;MQ=71.32;MQ0=1;MQRankSum=-0.323;QD=43.93;ReadPosRankSum=0.618;VQSLOD=4.7922;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:4,8:13:24.08:685,24,0	0/0:24,0:15:32.37:0,32,464	0/1:16,0:11:34.20:34,0,249	0/0:28,0:27:56.20:0,56,1025	./.	./.	./.	0/0:16,0:16:33.10:0,33,573	1/1:3,9:14:36.08:742,36,0	1/1:3,15:21:39.06:1044,39,0	0/0:12,0:12:33.11:0,33,604	0/0:15,0:15:36.11:0,36,613	0/0:13,0:13:24.02:0,24,379	0/0:22,0:22:48.16:0,48,886	1/1:1,8:10:15.05:428,15,0	1/1:4,16:21:45.15:1284,45,0	0/0:37,0:37:74.74:0,75,1353	./.	./.	./.	./.	0/0:30,0:30:61.06:0,61,1059	0/0:20,0:20:45.15:0,45,800	./.	./.	./.	./.
chr10	84808209	.	AAAAC	A	5815.13	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=15.761;DP=682;FS=0.776;HRun=0;HaplotypeScore=117.2640;InbreedingCoeff=0.9511;MQ=52.42;MQ0=27;MQRankSum=-4.562;QD=15.42;ReadPosRankSum=1.453;VQSLOD=4.6773;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:43,0:41:51.06:475,51,0	1/1:3,0:9:15.02:140,15,0	0/0:16,0:2:6.02:0,6,85	0/0:30,0:4:12.04:0,12,201	0/0:32,0:31:69.13:0,69,1473	1/1:11,0:11:12:108,12,0	1/1:21,0:21:24.01:219,24,0	1/1:11,14:23:33.09:389,33,0	0/0:21,0:21:17.27:0,17,997	1/1:4,0:22:33.04:307,33,0	1/1:5,0:15:18.02:166,18,0	0/0:32,0:32:41.36:0,41,1518	0/0:18,0:18:36.12:0,36,836	0/0:23,1:24:5.17:0,5,1122	0/0:31,0:31:81.28:0,81,1713	1/1:5,0:28:40.25:436,40,0	1/1:11,0:29:27.02:248,27,0	0/0:29,0:29:51.12:0,51,1008	1/1:3,6:9:18.02:202,18,0	1/1:7,23:29:56.91:717,57,0	1/1:4,21:24:33.07:510,33,0	1/1:7,11:17:30.10:453,30,0	0/0:21,0:21:30.10:0,30,637	0/0:51,0:51:99:0,129,2629	1/1:23,0:23:36.04:335,36,0	1/1:23,0:22:39.01:354,39,0	1/1:9,20:29:33.02:539,33,0	1/1:10,1:11:21.50:218,22,0
chr10	84808222	.	AAACAAACAAAC	A	1515.93	PASS	AB=0.994;AC=10;AF=0.179;AN=56;BaseQRankSum=10.683;DP=679;FS=12.767;HRun=0;HaplotypeScore=210.3095;InbreedingCoeff=0.2673;MQ=52.68;MQ0=19;MQRankSum=-10.325;QD=9.84;ReadPosRankSum=4.567;VQSLOD=1.3610;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:41:51.15:0,51,588	1/1:7,0:7:14.62:86,15,0	0/0:18,0:6:15.05:0,15,410	0/0:31,0:11:30.10:0,30,775	0/0:32,0:31:81.28:0,81,3661	0/1:11,0:11:18.49:18,0,92	1/1:1,20:21:27.09:886,27,0	0/0:20,0:19:36.18:0,36,414	0/0:23,0:23:63.19:0,63,2591	0/1:24,0:24:99:146,0,319	0/1:17,0:15:76.84:77,0,126	0/0:32,0:32:93.32:0,93,3891	0/0:19,0:19:51.17:0,51,2261	0/0:26,0:26:75.24:0,75,3138	0/0:33,0:33:93.32:0,93,4148	0/1:26,0:27:26.79:285,0,27	0/1:28,0:25:99:163,0,117	0/0:26,0:26:37.84:0,38,2522	0/0:14,0:13:29.55:0,30,386	0/0:28,0:28:68.04:0,68,1580	0/0:28,0:27:48.16:0,48,1087	0/0:19,0:18:42.48:0,42,795	0/0:16,0:16:42.14:0,42,1732	0/0:53,0:53:99:0,154,6425	0/0:24,0:24:36.11:0,36,414	0/1:19,0:18:10.61:11,0,487	0/0:26,0:25:45.04:0,45,956	0/0:13,0:13:24.07:0,24,335
chr10	84808225	.	CAAACA	C	5459.35	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=14.050;DP=698;FS=7.457;HRun=0;HaplotypeScore=132.7789;InbreedingCoeff=0.4541;MQ=52.51;MQ0=19;MQRankSum=-4.437;QD=15.78;ReadPosRankSum=10.261;VQSLOD=2.4327;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,45:44:51.18:1107,51,0	1/1:7,0:7:15.05:182,15,0	0/0:20,0:7:18.06:0,18,314	0/0:34,0:15:42.06:0,42,688	0/0:32,0:31:81.28:0,81,2263	1/1:2,9:11:12.04:256,12,0	1/1:20,0:20:23.34:317,23,0	0/0:24,0:22:41.48:0,41,304	0/0:22,0:22:65.01:0,65,1677	0/1:27,0:27:99:341,0,249	0/1:16,0:15:99:200,0,122	0/0:32,0:32:95.13:0,95,2493	0/0:20,0:20:54.18:0,54,1345	0/0:27,0:27:71.47:0,71,1905	0/0:31,0:31:93.32:0,93,2601	0/1:27,0:27:21.91:518,0,22	0/1:28,0:25:99:304,0,128	0/0:26,0:26:54.65:0,55,1654	0/0:14,0:13:20.42:0,20,181	0/1:28,0:28:2.15:2,0,269	0/1:32,0:31:10.42:10,0,288	0/1:20,0:19:0.16:0,0,233	0/0:16,0:16:45.15:0,45,1094	0/0:54,0:54:99:0,157,4224	1/1:2,22:24:36.12:781,36,0	1/1:1,19:19:51.17:981,51,0	0/1:25,0:24:26.86:27,0,137	1/1:2,13:15:23.11:435,23,0
chr10	84808229	.	CA	C	1728.39	PASS	AB=0.997;AC=23;AF=0.411;AN=56;BaseQRankSum=16.072;DP=688;FS=5.774;HRun=3;HaplotypeScore=100.4003;InbreedingCoeff=0.3623;MQ=52.73;MQ0=16;MQRankSum=-4.386;QD=4.92;ReadPosRankSum=8.579;VQSLOD=-0.1719;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:46,0:44:48.88:261,49,0	1/1:6,0:6:5.36:12,5,0	0/0:22,1:9:24.03:0,24,288	0/0:31,0:16:45.07:0,45,545	0/0:32,0:31:84.28:0,84,1177	1/1:9,0:9:11.74:79,12,0	1/1:20,0:20:16.64:83,17,0	0/1:25,0:23:99:311,0,188	0/0:21,1:22:29.31:0,29,823	0/0:25,1:26:26.60:0,27,409	0/1:15,0:14:4.73:5,0,168	0/0:32,1:33:56.40:0,56,1198	0/0:21,0:21:60.18:0,60,793	0/0:25,0:25:64.59:0,65,953	0/0:32,0:32:96.31:0,96,1326	0/1:27,0:27:4.43:4,0,120	0/1:29,0:26:3.54:4,0,250	0/0:22,0:22:49.96:0,50,786	0/1:16,0:15:99:114,0,108	0/1:27,0:27:99:145,0,159	0/1:30,1:30:40.13:40,0,234	0/1:19,0:18:99:134,0,207	0/0:15,0:15:45.12:0,45,586	0/0:55,0:55:99:0,152,2079	1/1:22,0:22:34.50:184,35,0	1/1:19,0:18:49.67:373,50,0	0/1:25,0:24:38.92:39,0,114	1/1:14,1:15:22.48:136,22,0
chr10	84808594	.	T	TC	644.03	PASS	AB=0.992;AC=38;AF=0.792;AN=48;BaseQRankSum=-1.035;DP=179;FS=2.143;HRun=0;HaplotypeScore=86.1447;InbreedingCoeff=0.0426;MQ=81.04;MQ0=12;MQRankSum=-2.189;QD=3.64;ReadPosRankSum=-0.320;VQSLOD=3.3228;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:41,0:8:81.42:81,0,136	0/1:41,0:14:80.15:80,0,81	1/1:4,0:4:0.66:7,1,0	1/1:4,0:4:3.96:35,4,0	1/1:8,0:8:16.14:70,16,0	1/1:4,0:4:11.10:62,11,0	1/1:7,0:7:11.47:52,11,0	0/1:3,0:3:2.08:5,0,2	1/1:3,1:4:1.78:22,2,0	0/1:7,0:7:0.06:17,0,0	1/1:1,0:1:1.82:5,2,0	0/1:4,0:4:1.94:14,0,2	0/0:1,0:1:2.04:0,2,6	0/1:2,0:2:0.48:17,0,0	1/1:1,0:1:2.98:22,3,0	./.	1/1:3,0:2:5.62:28,6,0	1/1:3,0:3:8.27:46,8,0	1/1:2,0:2:2.68:11,3,0	1/1:2,0:2:1:4,1,0	1/1:2,3:5:2.30:11,2,0	0/1:3,0:2:1.58:2,0,2	1/1:3,0:3:1.80:7,2,0	0/1:3,0:3:0.11:3,0,0	1/1:15,0:15:24.80:143,25,0	./.
chr10	84808596	.	TAAAA	T	1813.85	PASS	AB=0.667;AC=41;AF=0.854;AN=48;BaseQRankSum=5.265;DP=173;FS=1.294;HRun=10;HaplotypeScore=88.4792;InbreedingCoeff=0.3624;MQ=80.73;MQ0=14;MQRankSum=-5.141;QD=22.96;ReadPosRankSum=5.458;VQSLOD=1.3307;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:45,0:8:14.63:0,15,199	0/0:42,0:14:17.33:0,17,172	1/1:1,0:4:6.01:62,6,0	1/1:4,0:4:7.91:37,8,0	1/1:1,7:7:18.06:252,18,0	1/1:0,2:3:9.01:121,9,0	1/1:1,0:5:14.86:145,15,0	1/1:1,0:3:5.16:52,5,0	1/1:3,0:3:8.73:59,9,0	0/1:3,0:6:10.75:105,0,11	1/1:0,0:1:3.01:37,3,0	1/1:2,0:4:11.73:100,12,0	1/1:1,0:1:2.84:14,3,0	1/1:2,0:2:2.84:14,3,0	./.	./.	1/1:2,2:2:6.02:97,6,0	1/1:0,1:2:6.02:84,6,0	1/1:2,1:3:3.01:48,3,0	1/1:0,1:1:3.01:49,3,0	1/1:1,0:1:2.92:17,3,0	1/1:3,0:2:5.59:34,6,0	1/1:2,0:2:2.96:19,3,0	1/1:3,0:3:8.91:65,9,0	1/1:3,12:15:33:533,33,0	0/0:1,0:1:3.01:0,3,37
chr10	84808614	.	T	TTG	160.03	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=2.652;DP=372;FS=1.291;HRun=0;HaplotypeScore=104.0045;InbreedingCoeff=0.4945;MQ=53.07;MQ0=24;MQRankSum=-1.434;QD=14.55;ReadPosRankSum=2.317;VQSLOD=3.2004;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:8:20.78:0,21,140	./.	0/0:55,0:4:6:0,6,53	0/0:45,0:12:14.55:0,15,120	0/0:15,0:15:30.12:0,30,181	0/0:16,0:14:20.68:0,21,214	1/1:4,7:9:13.71:247,14,0	0/0:23,0:18:40.15:0,40,279	0/0:12,0:11:22.08:0,22,126	0/0:15,0:13:32.27:0,32,218	0/0:8,0:8:18.51:0,19,111	0/0:15,0:12:21.23:0,21,147	0/0:7,0:3:8.67:0,9,51	0/0:11,0:10:27.16:0,27,165	0/0:8,0:7:14.82:0,15,109	0/0:3,0:3:8.83:0,9,56	0/0:6,0:5:8.90:0,9,60	0/0:6,0:5:14.88:0,15,105	0/0:12,0:8:23.69:0,24,163	0/0:9,0:9:23.43:0,23,145	0/0:7,0:7:15.66:0,16,98	0/0:6,0:5:14.74:0,15,95	0/0:5,0:5:13.91:0,14,90	0/0:8,0:7:0.37:0,0,56	0/0:8,0:7:12.21:0,12,75	0/0:15,0:15:41.37:0,41,281	0/0:28,0:26:64.53:0,65,410	0/0:3,0:3:3.01:0,3,44
chr10	84808662	.	C	CT	2396.81	PASS	AB=0.778;AC=12;AF=0.222;AN=54;BaseQRankSum=0.973;DP=395;FS=8.528;HRun=2;HaplotypeScore=70.7112;InbreedingCoeff=0.8388;MQ=47.25;MQ0=11;MQRankSum=0.793;QD=28.88;ReadPosRankSum=-0.570;VQSLOD=2.2555;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:51.16:0,51,629	1/1:0,4:4:12.04:173,12,0	./.	0/1:10,0:1:0:0,0,0	0/0:25,0:25:63.18:0,63,767	0/0:18,0:17:39.12:0,39,483	1/1:0,13:13:30.10:431,30,0	0/0:24,0:24:41.91:0,42,418	0/0:6,0:6:15.05:0,15,185	1/1:1,21:21:60.20:862,60,0	1/1:3,8:10:24.04:322,24,0	0/0:15,0:14:33.10:0,33,409	0/0:9,0:9:27.08:0,27,333	0/0:16,0:16:45.14:0,45,556	0/0:16,0:16:45.14:0,45,554	0/1:1,4:5:22.14:158,0,22	1/1:2,16:18:45.11:624,45,0	0/0:10,0:10:27.05:0,27,309	0/0:21,0:18:42.05:0,42,496	0/0:15,0:15:39.12:0,39,495	0/0:14,0:13:11.76:0,12,148	0/0:13,0:13:36.11:0,36,441	0/0:10,0:10:27.07:0,27,321	0/0:13,0:13:33.10:0,33,405	0/0:17,0:15:42.12:0,42,506	0/0:11,0:11:30.09:0,30,371	0/0:21,0:20:41.83:0,42,481	0/0:9,0:9:18.06:0,18,222
chr10	84808727	.	C	CTCCT	7976.23	PASS	AC=24;AF=0.444;AN=54;BaseQRankSum=1.370;DP=526;FS=1.882;HRun=0;HaplotypeScore=107.1032;InbreedingCoeff=0.9691;MQ=57.76;MQ0=1;MQRankSum=0.233;QD=34.68;ReadPosRankSum=-1.453;VQSLOD=4.7668;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:72.18:0,72,1110	1/1:5,2:7:15.05:345,15,0	0/0:21,0:12:12.04:0,12,188	0/0:10,0:8:12.04:0,12,180	0/0:26,0:26:45.15:0,45,743	0/0:17,0:17:30.07:0,30,455	1/1:12,0:15:26.89:326,27,0	1/1:20,5:27:21.06:362,21,0	0/0:12,0:12:30.10:0,30,495	1/1:11,11:21:45.14:1031,45,0	1/1:11,9:20:42.14:944,42,0	0/0:25,0:25:54.15:0,54,889	0/0:14,0:14:39.12:0,39,621	0/0:20,0:20:39.13:0,39,644	0/0:23,0:23:60.18:0,60,942	1/1:10,6:16:33.11:686,33,0	1/1:15,11:26:40.38:911,40,0	0/0:15,0:15:26.69:0,27,490	1/1:6,8:15:24:531,24,0	1/1:7,20:27:54.18:1227,54,0	1/1:6,9:17:12.04:294,12,0	1/1:5,4:10:9.03:221,9,0	0/0:13,0:13:24.06:0,24,370	0/0:20,0:20:47.22:0,47,764	0/0:23,0:23:63.22:0,63,1028	0/0:21,0:21:11.19:0,11,729	1/1:7,19:27:45.15:1097,45,0	./.
chr10	84808928	.	C	CTCTTTCTTTCTT	14269.14	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=12.454;DP=527;FS=1.742;HRun=0;HaplotypeScore=214.9358;InbreedingCoeff=0.8643;MQ=54.44;MQ0=6;MQRankSum=-12.446;QD=46.78;ReadPosRankSum=-2.134;VQSLOD=4.4483;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:31.90:461,32,0	1/1:3,0:3:5.99:167,6,0	0/0:18,0:11:24.07:0,24,533	0/0:16,0:11:18.03:0,18,358	0/1:19,0:19:89.28:89,0,483	1/1:14,0:14:33.06:733,33,0	1/1:13,0:13:24.08:547,24,0	1/1:27,0:26:60.11:991,60,0	0/0:24,0:24:57.18:0,57,1683	1/1:19,0:18:36.12:1310,36,0	1/1:22,0:22:39.43:994,39,0	0/0:25,0:25:66.23:0,66,2062	0/0:24,0:24:63.22:0,63,1808	0/0:16,0:16:39.13:0,39,1195	0/0:30,0:30:48.12:0,48,814	1/1:18,0:18:39.13:1633,39,0	1/1:12,16:29:24.06:948,24,0	0/0:19,0:19:30.09:0,30,493	1/1:17,0:14:27.07:447,27,0	1/1:10,0:9:24.08:604,24,0	1/1:17,0:17:17.95:206,18,0	1/1:11,0:11:24.04:644,24,0	0/0:17,0:17:39.12:0,39,1035	0/0:33,0:33:87.28:0,87,2521	1/1:15,0:14:1.09:608,1,0	1/1:19,0:18:48.12:1096,48,0	1/1:30,0:30:81.25:2497,81,0	1/1:5,0:5:9.03:293,9,0
chr10	84808941	.	T	TCTTC	1365.28	PASS	AB=1.000;AC=14;AF=0.269;AN=52;BaseQRankSum=0.549;DP=533;FS=10.509;HRun=0;HaplotypeScore=169.3982;InbreedingCoeff=0.3468;MQ=52.90;MQ0=7;MQRankSum=-0.353;QD=7.19;ReadPosRankSum=2.498;VQSLOD=1.8377;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:23.73:0,24,168	0/0:5,0:5:8.97:0,9,71	./.	./.	1/1:12,1:23:29.86:370,30,0	0/0:15,0:15:23.05:0,23,148	0/1:14,0:14:11.88:12,0,88	0/0:27,0:25:5.81:0,6,33	0/0:22,0:22:48.12:0,48,654	0/1:17,0:16:99:106,0,139	0/0:18,0:18:6.74:0,7,146	0/0:25,0:25:42.02:0,42,522	0/0:28,0:28:54.07:0,54,653	0/0:15,0:15:33.09:0,33,458	1/1:11,22:34:18.06:428,18,0	0/1:18,0:18:99:106,0,136	0/1:24,0:24:7.67:8,0,122	1/1:5,16:22:18.06:401,18,0	0/0:19,0:15:8.93:0,9,63	0/1:14,0:13:0.67:1,0,159	0/0:15,0:15:2.89:0,3,19	0/0:9,0:9:17.73:0,18,114	0/0:18,0:18:42:0,42,537	0/0:40,0:40:78.02:0,78,913	0/0:13,0:12:29.64:0,30,226	0/1:21,0:20:60.79:61,0,113	0/0:31,0:31:62.19:0,62,423	1/1:3,0:3:3.01:34,3,0
chr10	84808945	.	C	CTTTCTTTCTTT	5554.21	PASS	AB=0.964;AC=24;AF=0.429;AN=56;BaseQRankSum=12.573;DP=527;FS=22.552;HRun=0;HaplotypeScore=221.5651;InbreedingCoeff=0.2522;MQ=51.44;MQ0=7;MQRankSum=-9.648;QD=20.20;ReadPosRankSum=-3.024;VQSLOD=1.9975;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:17.05:158,0,17	0/1:6,0:6:13.96:76,0,14	0/0:15,0:8:11.61:0,12,475	0/0:11,0:6:18.04:0,18,375	0/0:21,0:21:29.16:0,29,741	1/1:15,0:15:34.36:331,34,0	1/1:14,0:14:32.94:414,33,0	1/1:23,0:21:9.48:435,9,0	0/0:23,0:23:69.16:0,69,1948	0/1:15,3:17:4.94:830,0,5	0/1:17,0:17:44.64:310,0,45	0/0:25,0:25:71.90:0,72,2318	0/0:28,0:28:84.20:0,84,2230	0/0:14,0:14:42.13:0,42,1412	0/0:35,0:35:51.01:0,51,931	0/1:15,2:18:15.11:771,0,15	0/1:21,0:21:64.08:178,0,64	0/0:25,0:25:32.95:0,33,542	0/1:17,0:13:17.40:142,0,17	1/1:15,0:14:28.35:398,28,0	1/1:15,0:15:2.59:183,3,0	1/1:9,0:9:8.90:95,9,0	0/0:16,0:16:48.14:0,48,1433	0/0:39,0:39:99:0,110,3024	0/1:13,0:12:99:133,0,99	0/1:23,0:24:6.86:528,0,7	0/1:30,0:30:99:349,0,99	1/1:2,0:3:9.02:223,9,0
chr10	84809077	.	TC	T	2760.45	PASS	AB=0.553;AC=9;AF=0.173;AN=52;BaseQRankSum=10.313;DP=547;FS=0.000;HRun=2;HaplotypeScore=53.4626;InbreedingCoeff=0.8562;MQ=52.63;MQ0=36;MQRankSum=1.359;QD=32.10;ReadPosRankSum=-0.104;VQSLOD=3.0415;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:50.32:874,50,0	0/0:5,0:5:12.04:0,12,176	./.	./.	0/0:22,0:22:66.22:0,66,986	1/1:1,14:15:42.14:545,42,0	0/0:14,0:12:36.09:0,36,498	0/0:21,0:16:45.15:0,45,667	0/0:16,0:16:48.16:0,48,719	0/0:15,0:13:39.13:0,39,585	0/0:23,0:22:54.14:0,54,745	0/0:19,0:19:57.11:0,57,755	0/0:23,0:23:66.21:0,66,969	0/0:16,0:16:48.15:0,48,700	0/0:16,0:16:48.16:0,48,718	0/0:21,0:21:60.20:0,60,897	0/0:34,0:33:93.25:0,93,1332	0/0:35,0:35:99:0,105,1509	0/0:16,0:12:36.07:0,36,514	0/0:26,0:23:63.20:0,63,925	0/0:22,0:22:66.22:0,66,984	0/0:18,0:18:51.17:0,51,749	0/0:18,0:17:48.15:0,48,700	0/0:17,0:16:45.11:0,45,649	1/1:3,17:20:54.16:687,54,0	0/1:4,17:20:32.78:586,0,33	0/0:26,0:25:78.26:0,78,1164	1/1:0,6:6:18.06:231,18,0
chr10	84809158	.	C	CT	2850.63	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-3.833;DP=488;FS=2.017;HRun=6;HaplotypeScore=53.0752;InbreedingCoeff=0.9357;MQ=59.88;MQ0=1;MQRankSum=-1.090;QD=30.33;ReadPosRankSum=3.028;VQSLOD=4.2999;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,25:31:81.17:971,81,0	0/0:5,0:5:11.99:0,12,112	0/0:15,0:13:16.54:0,17,140	0/0:7,0:5:2.21:0,2,55	0/0:27,0:27:66.10:0,66,650	1/1:0,14:14:42.13:528,42,0	0/0:9,0:9:20.94:0,21,184	0/0:29,0:29:72:0,72,686	0/0:12,0:12:14.39:0,14,281	0/0:16,0:16:45.04:0,45,442	0/0:29,0:29:72.13:0,72,721	0/0:15,0:15:45.03:0,45,434	0/0:14,0:14:36.06:0,36,360	0/0:20,0:20:54.07:0,54,528	0/0:15,0:15:42.08:0,42,424	0/0:23,0:23:54.07:0,54,534	0/0:27,0:27:72.11:0,72,713	0/0:35,0:35:86.25:0,86,846	0/0:23,0:22:57.99:0,58,572	0/0:9,0:9:24.01:0,24,228	0/0:10,0:10:24.03:0,24,237	0/0:6,0:6:15.03:0,15,153	0/0:20,0:20:54.07:0,54,530	0/0:10,0:10:24.02:0,24,240	1/1:3,16:19:51.16:641,51,0	1/1:8,15:23:51.10:620,51,0	0/0:18,0:18:54.10:0,54,537	1/1:0,7:7:21.07:264,21,0
chr10	84809711	.	T	TTGTG	3195.43	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=10.308;DP=658;FS=0.000;HRun=0;HaplotypeScore=159.9557;InbreedingCoeff=0.6442;MQ=64.43;MQ0=8;MQRankSum=-9.041;QD=7.47;ReadPosRankSum=-4.659;VQSLOD=0.5286;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:39:12.04:175,12,0	1/1:7,0:7:6.02:96,6,0	0/1:33,0:17:22.07:52,0,22	0/1:33,0:22:5.73:6,0,81	0/0:34,0:35:69.08:0,69,1002	1/1:12,0:12:3.01:52,3,0	1/1:12,16:29:24.02:492,24,0	1/1:32,0:28:19.25:166,19,0	0/0:17,0:18:36.08:0,36,512	1/1:24,0:24:32.94:418,33,0	1/1:17,0:17:2.67:26,3,0	0/0:23,0:23:51.65:0,52,823	0/0:21,0:21:36.12:0,36,588	0/0:28,0:29:54.09:0,54,775	0/0:31,0:32:72.22:0,72,1096	1/1:18,0:17:10.94:177,11,0	0/1:21,0:20:7.75:209,0,8	0/0:19,0:20:17.55:0,18,561	1/1:31,0:30:27.07:333,27,0	1/1:20,0:19:6.01:73,6,0	1/1:16,0:15:2.84:48,3,0	1/1:29,0:29:2.86:25,3,0	0/0:15,0:17:32.68:0,33,450	0/0:33,0:35:51.08:0,51,1093	1/1:20,0:20:12.04:196,12,0	1/1:22,0:21:34.77:378,35,0	1/1:19,0:19:26.54:387,27,0	1/1:3,0:5:6.02:90,6,0
chr10	84809732	.	T	TGTGTGTGTGTGTGG	7525.51	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=6.602;DP=684;FS=15.455;HRun=0;HaplotypeScore=243.8682;InbreedingCoeff=0.1133;MQ=62.47;MQ0=11;MQRankSum=-9.472;QD=20.01;ReadPosRankSum=-1.692;VQSLOD=2.3140;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:49:12.51:644,13,0	1/1:6,0:6:3.48:70,3,0	0/0:45,0:19:9:0,9,373	0/0:43,0:25:21.05:0,21,402	0/0:28,0:28:81.08:0,81,2423	1/1:2,0:22:3.01:190,3,0	0/1:35,0:35:77.98:78,0,291	0/1:27,0:23:99:619,0,113	0/0:21,0:21:57.08:0,57,1357	0/1:21,0:21:52.60:1124,0,53	0/0:20,0:20:14.90:0,15,117	0/0:26,0:26:72.61:0,73,1912	0/0:19,0:19:54.04:0,54,1654	0/0:24,0:24:63.09:0,63,1670	0/0:31,0:31:87.13:0,87,2743	0/1:18,0:17:19.90:602,0,20	0/1:21,0:20:99:441,0,130	0/1:15,0:15:26.79:27,0,1375	0/1:27,0:26:99:869,0,182	0/1:24,0:23:99:184,0,116	0/1:17,0:16:86.65:87,0,119	0/1:26,0:26:9.91:264,0,10	0/0:19,0:19:50.65:0,51,1284	0/0:32,0:32:62.99:0,63,2704	1/1:1,1:20:12.04:662,12,0	1/1:22,0:21:58.22:970,58,0	0/1:23,0:23:99:514,0,198	1/1:2,0:3:8.94:183,9,0
chr10	84810193	.	AAGAC	A	9069.74	PASS	AB=0.941;AC=27;AF=0.482;AN=56;BaseQRankSum=5.882;DP=612;FS=0.000;HRun=0;HaplotypeScore=125.6813;InbreedingCoeff=0.4839;MQ=65.64;MQ0=1;MQRankSum=-1.708;QD=28.98;ReadPosRankSum=-0.490;VQSLOD=4.6610;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:34:66.23:1297,66,0	1/1:0,6:6:18.06:318,18,0	0/0:25,0:20:53.24:0,53,843	0/0:21,0:18:47.46:0,47,740	0/0:32,0:32:96.11:0,96,2052	1/1:0,20:19:48.16:957,48,0	1/1:0,21:20:39.05:697,39,0	0/1:14,0:14:58.34:102,0,58	0/0:26,0:26:71.36:0,71,1799	1/1:5,8:11:33.09:559,33,0	1/1:0,13:13:36.04:588,36,0	0/0:24,0:24:72.22:0,72,1748	0/0:24,0:24:69.67:0,70,1579	0/0:22,0:22:63.17:0,63,1533	0/0:32,0:32:93.29:0,93,2358	0/1:6,14:19:24.70:905,0,25	1/1:9,15:24:66.16:1127,66,0	0/0:30,0:30:78.09:0,78,2099	0/1:17,0:16:46.11:46,0,269	0/1:22,0:22:35.70:36,0,330	0/1:18,0:18:36.42:36,0,194	0/1:25,0:25:99:131,0,302	0/0:33,0:33:93.32:0,93,2450	0/0:30,0:30:87.24:0,87,2089	1/1:0,19:19:45.11:852,45,0	1/1:0,24:24:72.18:1231,72,0	0/1:21,0:21:67.05:67,0,280	1/1:0,2:2:6.02:120,6,0
chr10	84810204	.	AC	A	1100.24	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=8.188;DP=613;FS=2.027;HRun=1;HaplotypeScore=121.3373;InbreedingCoeff=0.6269;MQ=63.54;MQ0=5;MQRankSum=-2.854;QD=9.02;ReadPosRankSum=-1.826;VQSLOD=0.5955;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:43.42:0,43,284	1/1:6,0:6:17.63:111,18,0	0/0:22,0:17:36.16:0,36,339	0/1:22,0:19:0.54:1,0,284	0/0:31,0:31:90.18:0,90,1183	0/0:21,0:20:35.63:0,36,151	0/0:21,0:20:23.03:0,23,139	0/1:19,0:19:99:247,0,200	0/0:24,0:24:72:0,72,936	1/1:15,1:12:20.24:205,20,0	1/1:12,0:12:22.26:140,22,0	0/0:27,0:27:81.19:0,81,1029	0/0:24,0:24:69.11:0,69,836	0/0:21,0:21:63.17:0,63,819	0/0:31,0:31:90.29:0,90,1236	0/1:24,0:23:63.16:272,0,63	1/1:21,2:22:43.38:290,43,0	0/0:28,1:29:80.66:0,81,1143	0/0:17,0:16:18.40:0,18,166	0/0:20,0:20:4.77:0,5,185	0/0:16,0:15:0.21:0,0,103	0/0:18,0:18:49.09:0,49,291	0/0:34,0:34:99:0,101,1326	0/0:29,0:29:81.70:0,82,1092	0/0:20,0:20:31.19:0,31,161	0/0:27,0:25:41.64:0,42,277	0/0:19,0:19:40.52:0,41,204	0/0:5,0:5:13.43:0,13,101
chr10	84810205	.	C	CAAA	3761.79	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=2.519;DP=625;FS=0.426;HRun=7;HaplotypeScore=141.4990;InbreedingCoeff=0.9772;MQ=64.16;MQ0=5;MQRankSum=-2.077;QD=32.43;ReadPosRankSum=-2.855;VQSLOD=0.9246;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:78.15:0,78,975	0/0:6,0:6:10.71:0,11,50	0/0:23,0:16:14.52:0,15,194	0/0:24,0:21:13.82:0,14,236	0/0:31,0:31:87.13:0,87,1095	0/0:21,0:20:51.13:0,51,645	0/0:21,0:20:35.22:0,35,444	1/1:6,14:22:46.62:621,47,0	0/0:25,0:25:57.15:0,57,778	0/0:16,0:12:17.94:0,18,99	0/0:12,0:12:18.86:0,19,112	0/0:28,0:28:72.18:0,72,919	0/0:24,0:24:54.13:0,54,696	0/0:22,0:22:60.16:0,60,780	0/0:30,0:30:81.25:0,81,1101	0/0:24,0:23:50.87:0,51,288	0/0:23,0:22:30.53:0,31,210	0/0:29,0:29:53.65:0,54,1031	1/1:4,11:16:45.11:786,45,0	1/1:2,18:23:51.55:906,52,0	1/1:5,13:17:24.08:492,24,0	1/1:2,0:18:39.48:279,39,0	0/0:34,0:34:94.53:0,95,1251	0/0:30,0:30:72.21:0,72,977	0/0:20,0:20:48.92:0,49,541	0/0:28,0:26:67.45:0,67,742	1/1:3,14:18:33.08:678,33,0	0/0:5,0:5:15.01:0,15,162
chr10	84810213	.	C	CAA	2623.65	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=3.913;DP=634;FS=10.495;HRun=7;HaplotypeScore=135.6409;InbreedingCoeff=0.6720;MQ=66.61;MQ0=5;MQRankSum=-4.452;QD=16.20;ReadPosRankSum=-1.009;VQSLOD=0.2978;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:87.22:0,87,998	1/1:2,4:6:18.06:263,18,0	0/1:26,0:18:10.25:10,0,137	0/0:27,0:23:38.48:0,38,352	0/0:31,0:31:84.19:0,84,963	0/0:21,0:20:54.16:0,54,625	0/0:19,0:18:39.11:0,39,454	0/0:21,0:21:51.58:0,52,442	0/0:27,0:27:72.18:0,72,817	1/1:4,18:18:46.96:654,47,0	1/1:5,8:13:27.09:418,27,0	0/0:27,0:27:75.22:0,75,872	0/0:20,0:20:54.07:0,54,611	0/0:24,0:24:66.19:0,66,765	0/0:28,0:28:69.18:0,69,803	1/1:1,20:20:19.23:749,19,0	1/1:7,13:20:47.49:669,47,0	0/0:29,0:29:78.19:0,78,892	0/0:18,0:17:4.07:0,4,118	0/0:22,0:22:24.03:0,24,155	0/0:17,0:16:10.48:0,10,177	0/1:20,0:20:27.50:27,0,160	0/0:36,0:36:99:0,104,1168	0/0:28,0:28:77.78:0,78,883	0/0:20,0:20:54.16:0,54,619	0/1:33,0:31:14.75:15,0,763	0/0:15,0:15:15.52:0,16,49	0/0:6,0:6:18.05:0,18,209
chr10	84810866	.	ACTC	A	4472.22	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.306;DP=695;FS=11.722;HRun=0;HaplotypeScore=108.3910;InbreedingCoeff=0.9992;MQ=80.75;MQ0=0;MQRankSum=-4.140;QD=41.41;ReadPosRankSum=1.762;VQSLOD=5.6210;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,153,3246	1/1:0,9:9:24.08:385,24,0	0/0:24,0:24:37.76:0,38,1125	0/0:32,0:32:75.11:0,75,1454	0/0:32,0:32:81.08:0,81,1665	0/0:19,0:19:54.19:0,54,1152	0/0:22,0:22:63.16:0,63,1343	0/0:27,0:27:78.27:0,78,1673	0/0:27,0:27:75.24:0,75,1596	1/1:1,25:25:72.23:1128,72,0	1/1:2,21:22:54.18:867,54,0	0/0:26,0:26:78.24:0,78,1615	0/0:19,0:19:51.18:0,51,1119	0/0:28,0:28:78.25:0,78,1661	0/0:32,0:32:93.32:0,93,2033	1/1:1,24:25:66.17:1031,66,0	1/1:0,25:25:66.23:1061,66,0	0/0:27,0:27:78.24:0,78,1641	0/0:18,0:18:51.16:0,51,1027	0/0:25,0:25:69.23:0,69,1450	0/0:28,0:28:84.26:0,84,1741	0/0:27,0:27:66.23:0,66,1358	0/0:15,0:15:39.13:0,39,835	0/0:19,0:19:57.19:0,57,1230	0/0:15,0:15:42.14:0,42,862	0/0:26,1:27:27.02:0,27,1476	0/0:32,0:32:81.28:0,81,1749	0/0:14,0:14:39.06:0,39,782
chr10	84811268	.	ATG	A	364.32	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=5.952;DP=559;FS=9.335;HRun=0;HaplotypeScore=101.4607;InbreedingCoeff=0.6343;MQ=71.15;MQ0=2;MQRankSum=1.600;QD=8.67;ReadPosRankSum=0.093;VQSLOD=2.3409;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:51.13:0,51,883	1/1:0,15:15:30.10:458,30,0	0/0:18,0:13:2.91:0,3,109	0/1:27,0:17:2.87:3,0,94	0/0:29,0:29:84.27:0,84,1576	0/0:17,0:17:36.09:0,36,627	0/0:13,0:13:23.46:0,23,425	0/0:51,0:51:99:0,150,2357	0/0:17,0:17:42.10:0,42,706	0/0:30,0:30:90.17:0,90,1627	0/0:30,0:30:81.26:0,81,1527	0/0:18,0:18:42.12:0,42,714	0/0:8,0:8:15.05:0,15,279	0/0:11,0:11:18.05:0,18,314	0/0:19,0:19:42.13:0,42,776	0/0:17,0:17:36.11:0,36,660	0/0:19,0:19:51.12:0,51,868	0/0:15,0:15:39.05:0,39,678	0/0:20,0:20:57.15:0,57,990	0/0:31,0:31:93.27:0,93,1684	0/0:9,0:9:24.04:0,24,363	0/0:17,0:17:48.08:0,48,727	0/0:18,0:18:51.13:0,51,914	0/0:11,0:11:27.04:0,27,420	0/0:14,0:13:33.09:0,33,563	0/0:28,0:28:81.24:0,81,1438	0/0:18,0:17:48.13:0,48,856	0/0:19,0:19:54.15:0,54,972
chr10	84811845	.	T	TC	5595.91	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-2.790;DP=649;FS=2.282;HRun=7;HaplotypeScore=70.9757;InbreedingCoeff=0.9682;MQ=92.12;MQ0=0;MQRankSum=-1.390;QD=20.65;ReadPosRankSum=4.192;VQSLOD=4.5756;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,45:50:96.29:1160,96,0	1/1:1,0:2:2.88:15,3,0	0/0:34,0:34:80.31:0,80,740	0/0:25,0:25:35.18:0,35,432	0/0:21,0:21:60.10:0,60,579	1/1:2,20:21:51.16:615,51,0	1/1:2,28:30:69.21:834,69,0	0/0:31,0:31:75.10:0,75,719	0/0:13,0:13:36.06:0,36,347	1/1:5,1:28:63.20:327,63,0	1/1:2,2:11:22.97:138,23,0	0/0:20,0:20:60.07:0,60,570	0/0:25,1:26:29.86:0,30,571	0/0:16,0:16:45.07:0,45,434	0/0:29,0:29:81.13:0,81,782	1/1:5,2:23:14.42:197,14,0	1/1:1,1:34:77.63:395,78,0	0/0:15,0:15:39.06:0,39,377	0/0:19,0:19:54.09:0,54,521	0/0:22,0:22:48.06:0,48,463	0/0:45,1:46:86.89:0,87,1102	0/0:15,0:15:42.05:0,42,399	0/0:11,0:11:30.05:0,30,288	0/0:35,0:35:96.11:0,96,913	1/1:0,18:18:45.14:544,45,0	1/1:4,17:22:50.97:575,51,0	1/1:3,22:25:54.14:652,54,0	1/1:0,6:6:12.04:145,12,0
chr10	84813621	.	T	TTCTCTCTCTCTC	1768.66	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=3.616;DP=515;FS=9.128;HRun=0;HaplotypeScore=194.2362;InbreedingCoeff=0.8020;MQ=78.09;MQ0=0;MQRankSum=-4.483;QD=13.20;ReadPosRankSum=-3.158;VQSLOD=1.1035;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,4:12:1.55:4,2,0	1/1:4,0:4:3.01:50,3,0	0/0:37,0:31:59.94:0,60,1840	0/0:35,0:34:51.15:0,51,1647	0/0:26,0:26:69.24:0,69,2399	1/1:33,0:32:12.03:273,12,0	1/1:15,0:15:15.05:728,15,0	0/0:43,0:43:62.06:0,62,2062	0/0:13,0:13:30.07:0,30,871	1/1:14,0:14:3.01:118,3,0	1/1:8,0:8:9.03:300,9,0	0/0:15,0:16:42.14:0,42,1291	0/0:13,0:13:36.12:0,36,1160	0/0:16,0:16:39.13:0,39,1321	0/0:15,0:17:45.15:0,45,1462	1/1:12,0:12:3.01:77,3,0	./.	0/0:14,0:14:36.12:0,36,1262	0/0:32,0:32:39.76:0,40,1009	0/0:20,0:20:48.16:0,48,1104	0/0:18,0:18:36.12:0,36,877	0/0:13,0:13:18.95:0,19,444	0/0:21,0:21:57.18:0,57,1769	0/0:20,0:20:51.17:0,51,1707	1/1:13,0:13:3.01:128,3,0	1/1:15,0:14:9.03:234,9,0	0/0:23,0:23:47.66:0,48,1106	1/1:7,0:7:3.01:36,3,0
chr10	84813636	.	T	TCA	4871.32	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-0.981;DP=556;FS=2.884;HRun=0;HaplotypeScore=148.9130;InbreedingCoeff=0.8551;MQ=63.69;MQ0=0;MQRankSum=-6.158;QD=15.42;ReadPosRankSum=-2.596;VQSLOD=4.4052;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:13:2.99:24,3,0	1/1:5,0:5:5.79:38,6,0	0/0:35,0:30:56.44:0,56,549	0/0:27,0:27:33.59:0,34,371	0/0:27,0:27:68.87:0,69,765	1/1:19,1:30:36.74:142,37,0	0/1:16,0:16:18.76:34,0,19	1/1:12,33:45:96.12:1190,96,0	0/0:15,0:15:36.06:0,36,396	1/1:19,0:19:17.32:99,17,0	1/1:13,0:13:5.97:49,6,0	0/0:20,0:20:51.07:0,51,546	0/0:13,0:13:39.11:0,39,471	0/0:17,0:17:24.10:0,24,461	0/0:20,0:20:53.95:0,54,555	1/1:18,0:18:28.01:214,28,0	1/1:8,0:8:11.95:98,12,0	0/0:18,0:18:51.07:0,51,556	1/1:16,7:23:45.52:572,46,0	1/1:4,22:26:29.67:627,30,0	1/1:5,17:22:30.10:492,30,0	1/1:2,10:13:15.05:246,15,0	0/0:23,0:23:48.08:0,48,540	0/0:25,0:25:60.05:0,60,650	1/1:8,0:14:19.12:104,19,0	1/1:16,0:17:29.28:243,29,0	1/1:5,22:27:39.06:639,39,0	1/1:2,0:4:8.37:60,8,0
chr10	84813933	.	GCACA	G	6108.93	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.960;DP=705;FS=10.451;HRun=0;HaplotypeScore=127.4533;InbreedingCoeff=0.9932;MQ=70.27;MQ0=3;MQRankSum=-6.234;QD=40.73;ReadPosRankSum=0.495;VQSLOD=4.7756;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,3180	0/0:4,0:4:12.04:0,12,316	0/0:33,0:27:69.13:0,69,1714	0/0:40,0:28:77.40:0,77,1644	0/0:26,0:26:78.27:0,78,2003	0/0:29,0:29:81.28:0,81,2132	0/0:32,0:32:93.32:0,93,2423	1/1:6,26:32:78.24:1374,78,0	0/0:30,0:30:84.29:0,84,2210	0/0:26,0:26:78.27:0,78,2056	0/0:13,0:13:36.12:0,36,950	0/0:22,0:22:66.23:0,66,1653	0/0:23,0:23:66.23:0,66,1740	0/0:18,0:18:54.19:0,54,1393	0/0:27,0:27:75.26:0,75,1981	0/0:29,0:29:87.28:0,87,2204	0/0:21,0:21:60.19:0,60,1494	0/0:23,0:23:66.23:0,66,1725	1/1:0,12:12:36.12:648,36,0	1/1:3,27:30:63.22:1159,63,0	1/1:3,17:20:28.34:500,28,0	1/1:0,23:23:57.15:1048,57,0	0/0:28,0:28:81.28:0,81,2129	0/0:37,0:37:99:0,105,2720	0/0:18,0:18:54.19:0,54,1383	0/0:25,0:25:69.24:0,69,1818	1/1:3,30:33:75.26:1380,75,0	0/0:9,0:9:24.08:0,24,593
chr10	84814575	.	GAGAGAAGAA	G	2342.66	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=5.377;DP=425;FS=12.365;HRun=0;HaplotypeScore=118.9928;InbreedingCoeff=0.2816;MQ=60.26;MQ0=4;MQRankSum=-1.879;QD=10.51;ReadPosRankSum=-2.717;VQSLOD=0.9695;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:26.79:80,0,27	1/1:0,8:8:3.12:302,3,0	0/0:36,0:15:40.36:0,40,803	0/0:30,0:13:32.02:0,32,731	0/0:17,0:16:45.03:0,45,1015	0/1:12,0:11:22.54:25,0,23	1/1:10,0:10:15.66:225,16,0	0/1:21,0:21:78.11:78,0,158	0/0:18,0:18:45.13:0,45,1429	1/1:4,12:15:24.57:429,25,0	1/1:9,3:12:21.05:381,21,0	0/0:15,0:15:45.01:0,45,1311	0/0:18,0:18:49.97:0,50,1453	0/0:10,0:10:27.08:0,27,819	0/0:16,0:16:45.10:0,45,1494	0/1:6,0:5:99:157,0,107	1/1:4,12:17:15:359,15,0	0/0:10,0:9:24.03:0,24,858	0/1:14,0:14:65.66:66,0,161	0/1:21,0:20:27.71:28,0,244	0/1:8,0:8:24.29:43,0,24	0/1:12,0:12:33:45,0,33	0/0:19,0:19:38.71:0,39,1080	0/0:12,0:12:21.07:0,21,693	1/1:8,0:8:3.31:33,3,0	1/1:14,0:14:27.66:195,28,0	0/1:16,0:16:68.03:68,0,118	1/1:6,0:6:7.40:22,7,0
chr10	84814576	.	AGAG	A	5617.12	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=5.998;DP=420;FS=0.441;HRun=0;HaplotypeScore=69.5801;InbreedingCoeff=0.9004;MQ=60.43;MQ0=4;MQRankSum=-3.525;QD=26.01;ReadPosRankSum=-2.620;VQSLOD=3.9411;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,4:21:54.07:702,54,0	1/1:8,0:8:12.01:120,12,0	0/0:36,0:15:38.28:0,38,524	0/0:30,0:13:29.50:0,29,495	0/0:19,0:18:42.68:0,43,618	1/1:8,4:11:9.03:146,9,0	1/1:6,4:10:18.04:233,18,0	1/1:15,6:21:56.95:810,57,0	0/0:18,0:18:48.13:0,48,844	1/1:14,0:13:20.99:240,21,0	1/1:10,0:12:25.11:252,25,0	0/0:15,0:15:42.03:0,42,707	0/0:18,0:18:45.10:0,45,795	0/0:10,0:10:27.05:0,27,456	0/0:16,0:16:42.12:0,42,766	0/1:6,0:5:59.25:110,0,59	1/1:16,0:17:14.75:107,15,0	0/0:10,0:9:24.04:0,24,463	1/1:1,12:13:13.86:315,14,0	1/1:2,19:20:46.87:626,47,0	1/1:7,0:7:16.23:177,16,0	1/1:0,11:11:27.05:335,27,0	0/0:19,0:19:33.06:0,33,585	0/0:12,0:12:21.07:0,21,377	1/1:5,2:7:18.01:211,18,0	1/1:9,2:13:35.30:402,35,0	1/1:16,1:17:48.96:644,49,0	1/1:4,2:6:15.02:188,15,0
chr10	84814581	.	AG	A	2768.61	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=8.572;DP=487;FS=28.245;HRun=1;HaplotypeScore=82.4690;InbreedingCoeff=0.7208;MQ=59.49;MQ0=3;MQRankSum=-4.685;QD=10.22;ReadPosRankSum=-3.664;VQSLOD=-0.6450;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:37.45:343,37,0	1/1:8,0:8:12.27:53,12,0	0/0:36,0:13:26.49:0,26,220	0/0:31,0:14:21.97:0,22,214	0/0:19,0:18:10.56:0,11,225	1/1:5,8:12:11.91:86,12,0	1/1:9,0:9:14.24:78,14,0	1/1:26,1:26:56.79:409,57,0	0/0:20,0:20:39.97:0,40,321	1/1:15,0:14:26.75:162,27,0	1/1:17,0:17:28.43:190,28,0	0/0:17,0:17:13.27:0,13,238	0/0:17,0:17:40.33:0,40,340	0/0:13,0:13:2.94:0,3,163	0/0:16,0:16:17.12:0,17,277	0/1:6,0:6:9.41:78,0,9	1/1:17,0:17:12.96:56,13,0	0/0:12,1:12:4.80:0,5,168	0/1:23,0:23:17.88:170,0,18	1/1:25,0:24:45.12:285,45,0	1/1:12,0:12:19.64:133,20,0	1/1:16,0:16:32.98:196,33,0	0/0:18,0:18:30.25:0,30,266	0/0:16,0:16:1.89:0,2,138	1/1:9,1:10:18.32:105,18,0	1/1:19,1:20:39.28:259,39,0	1/1:18,1:19:49.34:325,49,0	0/1:6,0:6:1.13:48,0,1
chr10	84814771	.	ATCT	A	2381.62	PASS	AB=0.965;AC=15;AF=0.268;AN=56;BaseQRankSum=4.841;DP=443;FS=11.258;HRun=0;HaplotypeScore=89.8695;InbreedingCoeff=0.6636;MQ=66.65;MQ0=1;MQRankSum=-3.591;QD=16.77;ReadPosRankSum=3.877;VQSLOD=2.3965;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,7:32:82.07:657,82,0	1/1:1,5:7:12.04:194,12,0	0/0:20,0:10:29.59:0,30,366	0/0:13,0:11:23.90:0,24,239	0/0:13,0:13:38.96:0,39,546	0/0:4,0:17:25.16:0,25,150	0/1:15,0:17:4.75:141,0,5	0/0:29,0:29:3.33:0,3,134	0/0:18,0:18:51.09:0,51,839	1/1:1,7:8:21.05:309,21,0	1/1:0,11:14:20.93:279,21,0	0/0:10,0:10:24.01:0,24,426	0/0:8,0:8:23.95:0,24,369	0/0:8,0:8:14.77:0,15,222	0/0:13,0:13:38.92:0,39,646	1/1:0,4:11:21.07:318,21,0	1/1:1,16:19:39.13:644,39,0	0/0:26,0:25:69.13:0,69,1146	0/0:23,0:22:16.71:0,17,135	0/0:14,0:14:0.80:0,1,45	0/0:17,0:17:16.58:0,17,91	0/0:13,0:13:7.06:0,7,61	0/0:11,0:11:33.09:0,33,610	0/0:30,0:30:87.21:0,87,1588	0/0:3,0:9:11.90:0,12,58	0/1:4,0:17:17.07:17,0,100	0/1:13,0:13:10.14:10,0,19	0/0:1,0:7:10.87:0,11,61
chr10	84814772	.	TC	T	2367.85	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=4.553;DP=450;FS=12.284;HRun=1;HaplotypeScore=78.6578;InbreedingCoeff=0.9435;MQ=65.11;MQ0=1;MQRankSum=-1.612;QD=14.89;ReadPosRankSum=3.535;VQSLOD=2.1531;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:34:83.91:711,84,0	1/1:6,0:6:11.99:102,12,0	0/0:20,0:10:26.72:0,27,252	0/0:13,0:10:23.74:0,24,195	0/0:15,0:15:40.71:0,41,378	1/1:14,0:16:14.55:102,15,0	1/1:12,7:19:42.06:456,42,0	0/0:29,0:29:74.14:0,74,399	0/0:18,0:18:51.08:0,51,550	1/1:8,0:7:20.98:177,21,0	1/1:14,0:14:20.94:170,21,0	0/0:9,0:9:20.97:0,21,242	0/0:9,0:9:4.88:0,5,198	0/0:8,0:8:14.73:0,15,140	0/0:13,0:13:32.94:0,33,361	1/1:11,0:11:20.98:177,21,0	1/1:18,0:18:38.97:330,39,0	0/0:29,0:28:65.42:0,65,689	0/0:24,0:23:55.50:0,56,316	0/0:14,0:14:28.78:0,29,150	0/0:17,0:17:36.80:0,37,207	0/0:13,0:13:32.76:0,33,167	0/0:12,0:12:28.52:0,29,320	0/0:34,0:34:83.27:0,83,911	1/1:8,0:8:9.83:48,10,0	1/1:15,0:16:43.23:271,43,0	0/0:13,0:13:24.75:0,25,116	1/1:5,0:5:4.97:41,5,0
chr10	84814773	.	CTTTT	C	2999.98	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=-0.215;DP=484;FS=2.793;HRun=14;HaplotypeScore=101.1340;InbreedingCoeff=0.6448;MQ=63.36;MQ0=4;MQRankSum=-5.705;QD=18.75;ReadPosRankSum=2.038;VQSLOD=2.5427;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:40:94.82:0,95,906	0/1:6,0:6:10:23,0,10	0/0:21,0:10:23.10:0,23,322	0/0:14,0:10:17.76:0,18,188	0/0:17,0:17:33.10:0,33,696	0/0:20,0:19:33.11:0,33,604	0/0:22,0:22:48.12:0,48,673	1/1:4,22:28:66.03:872,66,0	0/0:17,0:21:45.12:0,45,943	0/0:8,0:7:9.98:0,10,46	0/1:14,0:14:22.20:22,0,64	0/0:10,0:10:27.09:0,27,571	0/0:10,0:10:24.08:0,24,492	0/0:7,0:9:18.04:0,18,340	0/0:13,0:14:36.12:0,36,793	0/1:13,0:12:49.03:86,0,49	0/1:18,0:18:27.53:44,0,28	0/0:28,0:29:69.23:0,69,1403	1/1:9,13:22:43.64:586,44,0	1/1:1,13:14:26.96:382,27,0	1/1:6,12:18:29.89:416,30,0	1/1:2,11:13:27.04:382,27,0	0/0:10,0:12:36.12:0,36,768	0/0:37,0:37:90.09:0,90,1859	0/0:13,0:13:27.01:0,27,411	0/0:17,0:17:45.15:0,45,767	1/1:1,12:13:27.05:382,27,0	0/0:5,0:5:12.04:0,12,224
chr10	84814879	.	C	CTTT	2611.74	PASS	AB=0.654;AC=31;AF=0.554;AN=56;BaseQRankSum=12.638;DP=576;FS=6.262;HRun=11;HaplotypeScore=120.7820;InbreedingCoeff=0.7401;MQ=60.01;MQ0=9;MQRankSum=-1.011;QD=6.98;ReadPosRankSum=-1.240;VQSLOD=0.2068;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:40:21.54:65,22,0	1/1:3,5:10:11.99:157,12,0	0/0:11,0:9:8.13:0,8,51	0/0:15,0:10:7.31:0,7,63	0/0:23,0:22:36.77:0,37,411	1/1:18,0:17:35.45:129,35,0	1/1:5,0:22:16.20:35,16,0	1/1:12,0:29:14.15:51,14,0	0/0:22,0:22:54.08:0,54,630	1/1:17,8:22:27.09:470,27,0	1/1:8,12:21:32.96:449,33,0	0/0:17,0:16:33.04:0,33,375	0/0:10,0:10:24.02:0,24,270	0/0:17,0:17:35.98:0,36,410	0/0:21,0:22:44.97:0,45,498	1/1:4,11:17:18.02:289,18,0	1/1:10,17:27:40.69:686,41,0	0/0:32,0:33:70.63:0,71,839	1/1:6,0:20:21.20:61,21,0	1/1:7,0:22:20.91:75,21,0	0/1:5,0:10:2.80:3,0,16	0/1:9,0:17:28.37:28,0,50	0/0:13,0:12:24:0,24,270	0/0:19,0:18:51.07:0,51,581	1/1:20,0:21:0.47:88,0,0	1/1:30,1:30:19:140,19,0	0/1:12,0:32:35.49:35,0,75	1/1:8,0:8:15.61:64,16,0
chr10	84814890	.	T	TTA	2714.94	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=2.781;DP=519;FS=0.431;HRun=0;HaplotypeScore=96.9480;InbreedingCoeff=0.3644;MQ=60.62;MQ0=1;MQRankSum=0.351;QD=12.69;ReadPosRankSum=1.320;VQSLOD=3.3597;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:43.44:0,43,205	0/1:8,0:8:15.41:15,0,52	0/0:8,0:7:4.88:0,5,57	0/0:8,0:5:10.01:0,10,74	0/0:19,0:19:50.83:0,51,550	1/1:0,21:21:45.15:801,45,0	0/0:18,0:18:26.35:0,26,91	0/1:26,0:25:22.97:23,0,161	0/0:23,0:23:69.12:0,69,822	0/1:14,0:14:23.57:24,0,83	0/1:14,0:14:9.17:59,0,9	0/0:13,0:13:36.11:0,36,476	0/0:13,0:13:38.92:0,39,384	0/0:17,0:17:44.14:0,44,547	0/0:19,0:19:51.09:0,51,626	0/1:13,0:13:0.87:1,0,33	0/1:23,0:22:42.47:42,0,64	0/0:33,0:33:92:0,92,1121	0/0:23,0:22:14.86:0,15,185	0/1:23,0:21:2.68:3,0,132	0/0:11,0:11:16:0,16,112	0/1:17,0:17:1.35:1,0,148	0/0:12,0:12:26.96:0,27,304	0/0:20,0:19:57.16:0,57,741	1/1:3,15:18:33.23:677,33,0	1/1:4,23:29:52.05:920,52,0	0/0:27,0:27:23.93:0,24,219	1/1:0,8:8:18.06:321,18,0
chr10	84815025	.	TTCA	T	4912.03	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.144;DP=687;FS=5.556;HRun=0;HaplotypeScore=117.1342;InbreedingCoeff=0.9992;MQ=82.78;MQ0=0;MQRankSum=-3.042;QD=40.26;ReadPosRankSum=1.558;VQSLOD=5.9818;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,53:56:99:2145,135,0	0/0:9,0:9:24.08:0,24,508	0/0:22,0:22:48.16:0,48,878	0/0:19,0:19:39.12:0,39,670	0/0:22,0:22:66.23:0,66,1442	1/1:0,16:16:39.13:627,39,0	0/0:18,0:18:51.18:0,51,1123	0/0:23,0:23:66.23:0,66,1444	0/0:29,0:29:84.29:0,84,1827	0/0:23,0:23:66.22:0,66,1384	0/0:19,0:19:51.15:0,51,1070	0/0:24,0:24:63.22:0,63,1374	0/0:20,0:20:57.18:0,57,1198	0/0:28,0:28:75.26:0,75,1617	0/0:27,0:26:81.28:0,81,1766	0/0:23,0:23:60.21:0,60,1307	0/0:44,0:44:99:0,129,2639	0/0:18,0:18:42.04:0,42,924	0/0:31,0:30:78.27:0,78,1669	0/0:32,0:32:90.31:0,90,1968	0/0:29,0:29:84.29:0,84,1853	0/0:16,0:16:45.15:0,45,991	0/0:15,0:15:45.15:0,45,992	0/0:41,0:41:99:0,123,2651	1/1:0,17:17:42.14:672,42,0	1/1:0,22:22:66.20:1035,66,0	0/0:33,0:33:96.33:0,96,2102	1/1:1,10:11:27.09:433,27,0
chr10	84816313	.	ACTC	A	6362.60	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.217;DP=488;FS=64.600;HRun=0;HaplotypeScore=84.5690;InbreedingCoeff=0.9853;MQ=88.44;MQ0=0;MQRankSum=-6.905;QD=43.58;ReadPosRankSum=2.578;VQSLOD=2.5552;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,2828	0/0:5,0:5:9.03:0,9,208	0/0:17,0:17:48.16:0,48,1077	0/0:21,0:21:51.03:0,51,963	0/0:10,0:10:27.09:0,27,622	0/0:12,0:12:36.12:0,36,805	0/0:13,0:13:39.13:0,39,857	1/1:1,17:18:51.13:838,51,0	0/0:14,0:14:42.14:0,42,969	0/0:18,0:18:54.19:0,54,1246	0/0:14,0:14:36.12:0,36,823	0/0:14,0:14:42.14:0,42,959	0/0:9,0:9:24.08:0,24,551	0/0:15,0:15:42.14:0,42,961	0/0:10,0:10:30.10:0,30,692	0/0:16,0:16:45.14:0,45,990	0/0:25,0:25:69.24:0,69,1592	0/0:17,0:17:48.16:0,48,1104	1/1:1,17:18:45.15:768,45,0	1/1:0,26:26:75.26:1278,75,0	1/1:1,35:36:96.80:1637,97,0	1/1:2,20:22:51.17:869,51,0	0/0:8,0:8:24.08:0,24,554	0/0:29,0:29:84.27:0,84,1878	0/0:16,0:16:48.16:0,48,1083	0/0:11,0:11:27.09:0,27,623	1/1:0,26:26:57.20:972,57,0	0/0:6,0:6:18.06:0,18,415
chr10	84816444	.	GCCAC	G	4424.28	PASS	AC=18;AF=0.409;AN=44;BaseQRankSum=3.674;DP=214;FS=11.268;HRun=0;HaplotypeScore=53.1817;InbreedingCoeff=0.6527;MQ=74.86;MQ0=0;MQRankSum=-4.132;QD=29.69;ReadPosRankSum=0.980;VQSLOD=3.5516;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,1:12:6.02:99,6,0	0/0:3,0:3:3.01:0,3,55	0/0:7,0:4:3.01:0,3,67	0/0:14,0:14:21.53:0,22,346	0/0:5,0:5:12.04:0,12,274	1/1:2,4:6:12.04:199,12,0	./.	1/1:21,0:21:27.05:417,27,0	0/0:5,0:5:15.05:0,15,360	0/0:5,0:5:3.01:0,3,50	./.	0/0:5,0:5:9.03:0,9,204	0/0:1,0:1:3.01:0,3,72	0/0:2,0:2:3.01:0,3,73	./.	0/0:3,0:3:3.01:0,3,54	0/0:1,0:1:3.01:0,3,55	0/0:3,0:3:3.01:0,3,74	1/1:16,0:16:27.09:446,27,0	1/1:15,0:15:36.12:593,36,0	1/1:40,0:40:93.24:1485,93,0	1/1:19,0:19:39.13:645,39,0	./.	0/0:2,0:2:3.01:0,3,74	./.	1/1:2,1:3:3.01:50,3,0	1/1:17,0:17:30.10:490,30,0	./.
chr10	84816452	.	CCCA	C	760.97	PASS	AB=0.970;AC=10;AF=0.200;AN=50;BaseQRankSum=9.931;DP=198;FS=1.956;HRun=0;HaplotypeScore=58.8576;InbreedingCoeff=-0.1232;MQ=69.58;MQ0=0;MQRankSum=-2.179;QD=5.36;ReadPosRankSum=7.934;VQSLOD=0.3343;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,1:10:6.07:6,0,184	0/0:1,0:1:3.01:0,3,69	0/0:7,0:4:9.01:0,9,111	0/0:12,0:11:30.05:0,30,521	0/0:5,0:5:12.04:0,12,271	0/1:6,0:6:37.69:38,0,55	0/0:2,0:2:6:0,6,59	0/1:20,0:20:53.80:54,0,310	0/0:5,0:5:15.05:0,15,336	0/0:6,0:6:18.06:0,18,249	0/0:2,0:2:6.02:0,6,72	0/0:3,0:3:9.03:0,9,207	0/0:1,0:1:3.01:0,3,69	0/0:1,0:1:3.01:0,3,69	0/0:2,0:2:6.01:0,6,59	0/0:2,0:2:2.96:0,3,69	0/0:1,0:1:3.01:0,3,69	0/0:2,0:2:6.02:0,6,102	0/1:12,0:12:36.35:91,0,36	0/1:16,1:17:28.08:135,0,28	1/1:39,0:39:30.01:347,30,0	0/1:17,2:19:90.37:133,0,90	./.	0/0:3,0:3:8.99:0,9,125	./.	0/1:2,0:2:7.90:8,0,30	0/1:17,0:17:84.71:85,0,145	./.
chr10	84816459	.	ACC	A	1874.48	PASS	AB=0.726;AC=9;AF=0.180;AN=50;BaseQRankSum=9.270;DP=219;FS=2.491;HRun=3;HaplotypeScore=57.6669;InbreedingCoeff=-0.0600;MQ=73.21;MQ0=0;MQRankSum=-3.890;QD=13.11;ReadPosRankSum=7.704;VQSLOD=0.3220;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:2.89:0,3,120	0/0:2,0:2:5.99:0,6,79	0/0:9,0:6:14.93:0,15,178	0/0:15,0:14:16.69:0,17,501	0/0:4,0:4:12.04:0,12,229	0/1:7,0:7:12.19:12,0,48	0/0:3,0:3:8.93:0,9,63	0/1:11,8:25:99:201,0,129	0/0:5,0:5:15.05:0,15,289	0/0:8,0:8:23.62:0,24,190	0/0:2,0:2:5.96:0,6,43	0/0:3,0:3:9.03:0,9,167	0/0:1,0:1:3.01:0,3,58	0/0:2,0:2:6.02:0,6,101	0/0:2,0:2:3:0,3,25	0/0:3,0:3:8.96:0,9,100	0/0:2,0:2:5.98:0,6,78	0/0:4,0:4:11.25:0,11,151	0/1:5,9:14:17.61:251,0,18	1/1:5,11:18:2.09:283,2,0	0/1:16,28:44:56:722,0,56	0/1:7,12:19:28.81:288,0,29	./.	0/0:4,0:4:12.03:0,12,169	./.	0/1:2,0:2:1.54:2,0,38	0/1:5,9:14:3.88:238,0,4	./.
chr10	84816463	.	ACC	A	1811.39	PASS	AB=0.801;AC=11;AF=0.212;AN=52;BaseQRankSum=9.797;DP=221;FS=4.085;HRun=3;HaplotypeScore=55.6672;InbreedingCoeff=-0.0866;MQ=71.94;MQ0=0;MQRankSum=-3.354;QD=12.08;ReadPosRankSum=7.107;VQSLOD=0.5047;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:5:3.05:3,0,105	0/0:2,0:2:5.97:0,6,48	0/0:9,0:6:15.01:0,15,199	0/0:15,0:14:36.54:0,37,485	0/0:4,0:4:12.04:0,12,232	0/1:6,0:6:18.10:18,0,66	0/0:3,0:3:8.90:0,9,60	0/1:17,8:25:99:159,0,126	0/0:5,0:5:15.05:0,15,289	0/0:9,0:9:19.88:0,20,123	0/0:3,0:3:5.94:0,6,41	0/0:3,0:3:9.02:0,9,143	0/0:1,0:1:3.01:0,3,58	0/0:2,0:2:6.02:0,6,98	0/0:1,0:1:3.01:0,3,41	0/0:3,0:3:8.94:0,9,67	0/1:3,0:3:15.97:16,0,38	0/0:4,0:4:9.02:0,9,140	0/1:6,9:15:30.14:230,0,30	1/1:6,11:17:3.68:284,4,0	0/1:15,28:43:51.11:722,0,51	0/1:7,12:19:45.40:263,0,45	0/0:1,0:1:3.01:0,3,41	0/0:6,0:6:18.05:0,18,248	./.	0/1:3,0:3:0.03:0,0,59	0/1:5,9:14:2.34:246,0,2	./.
chr10	84816649	.	CTT	C	2134.94	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.261;DP=538;FS=1.866;HRun=4;HaplotypeScore=69.7593;InbreedingCoeff=0.9980;MQ=74.51;MQ0=1;MQRankSum=-3.067;QD=38.12;ReadPosRankSum=2.656;VQSLOD=3.1487;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.21:0,63,1148	0/0:7,0:7:21.07:0,21,393	0/0:22,0:21:60.09:0,60,931	0/0:22,0:22:53.34:0,53,956	0/0:21,0:21:60.21:0,60,1091	1/1:0,23:22:60.20:883,60,0	0/0:21,0:21:60.20:0,60,1081	0/0:31,0:31:87.28:0,87,1535	0/0:10,0:10:30.10:0,30,561	0/0:20,0:20:57.19:0,57,1040	0/0:19,0:19:57.20:0,57,1057	0/0:16,0:16:48.16:0,48,899	0/0:19,0:19:57.20:0,57,1067	0/0:18,0:18:51.17:0,51,955	0/0:25,0:25:75.24:0,75,1347	0/0:16,0:16:48.15:0,48,841	0/0:25,0:25:75.24:0,75,1364	0/0:19,0:19:57.20:0,57,1061	0/0:14,0:14:36.12:0,36,673	0/0:29,0:29:87.21:0,87,1440	0/0:17,0:17:51.17:0,51,955	0/0:26,0:26:78.22:0,78,1397	0/0:9,0:9:27.09:0,27,506	0/0:20,0:20:60.21:0,60,1124	1/1:0,13:13:39.13:574,39,0	1/1:0,9:9:27.09:398,27,0	0/0:34,0:34:99:0,99,1811	1/1:0,11:11:30.10:441,30,0
chr10	84818080	.	GCT	G	13477.58	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=17.383;DP=706;FS=9.469;HRun=0;HaplotypeScore=82.8161;InbreedingCoeff=0.9988;MQ=77.18;MQ0=1;MQRankSum=-2.243;QD=42.38;ReadPosRankSum=0.314;VQSLOD=5.5585;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1959	1/1:0,6:6:18.06:293,18,0	0/0:22,0:21:59.96:0,60,1032	0/0:15,1:16:39.13:0,39,719	0/0:19,0:19:51.17:0,51,1024	0/0:34,0:34:99:0,102,2000	1/1:0,41:41:99:1661,102,0	1/1:1,32:33:96.24:1415,96,0	0/0:22,0:22:66.21:0,66,1291	1/1:0,30:30:90.29:1431,90,0	1/1:1,19:19:54.14:848,54,0	0/0:25,0:25:75.24:0,75,1471	0/0:26,0:26:78.25:0,78,1541	0/0:18,0:18:54.15:0,54,1006	0/0:40,0:40:99:0,120,2386	1/1:0,29:29:72.25:1161,72,0	1/1:1,39:38:54.59:1472,55,0	0/0:16,0:16:45.15:0,45,913	1/1:0,19:19:57.15:873,57,0	1/1:0,33:33:90.20:1402,90,0	1/1:0,22:22:60.20:974,60,0	1/1:0,15:15:45.15:733,45,0	0/0:28,0:28:74.03:0,74,1368	0/0:23,0:23:69.24:0,69,1385	0/0:11,0:11:33.11:0,33,669	0/0:31,1:32:47.79:0,48,1673	1/1:0,30:29:75.12:1216,75,0	0/0:22,0:22:66.18:0,66,1246
chr10	84818331	.	AAG	A	9803.57	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=17.508;DP=579;FS=35.046;HRun=0;HaplotypeScore=96.7716;InbreedingCoeff=0.9762;MQ=75.37;MQ0=2;MQRankSum=-4.064;QD=38.15;ReadPosRankSum=2.072;VQSLOD=3.4550;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,2173	1/1:0,11:11:33.03:463,33,0	0/0:27,0:27:23.23:0,23,1085	0/0:22,0:21:57.04:0,57,973	0/0:20,0:20:60.17:0,60,1098	0/0:20,0:20:60.21:0,60,1139	1/1:0,16:16:33.11:493,33,0	1/1:1,31:32:93.19:1257,93,0	0/0:21,0:21:60.19:0,60,1083	1/1:0,32:31:90.24:1300,90,0	1/1:0,22:22:62.86:858,63,0	0/0:22,0:22:66.14:0,66,1138	0/0:13,0:13:39.11:0,39,717	0/0:15,0:15:45.14:0,45,820	0/0:20,0:20:51.16:0,51,943	1/1:0,19:18:42.61:628,43,0	1/1:0,23:23:57.14:826,57,0	0/0:14,0:14:39.13:0,39,702	1/1:0,18:18:54.15:760,54,0	1/1:0,26:26:72.10:996,72,0	1/1:0,21:21:45.15:661,45,0	1/1:0,18:18:54.10:757,54,0	0/0:20,0:20:60.19:0,60,1102	0/0:20,0:20:60.14:0,60,1065	0/0:18,0:18:54.10:0,54,978	0/0:15,1:16:3.25:0,3,773	1/1:0,19:19:54.18:805,54,0	0/0:14,0:14:42.07:0,42,674
chr10	84818427	.	T	TATAG	4001.95	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-8.320;DP=510;FS=1.124;HRun=0;HaplotypeScore=95.8008;InbreedingCoeff=0.9825;MQ=84.76;MQ0=0;MQRankSum=-3.993;QD=58.85;ReadPosRankSum=0.993;VQSLOD=5.1933;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:60.89:0,61,1160	1/1:2,2:4:9.03:236,9,0	0/0:25,0:25:60.17:0,60,1035	0/0:15,0:14:36.06:0,36,564	0/0:26,0:26:75.26:0,75,1379	0/0:25,0:25:75.26:0,75,1355	0/0:14,0:14:36.11:0,36,631	0/0:30,0:30:81.27:0,81,1443	0/0:17,0:17:45.15:0,45,828	1/1:10,17:27:66.22:1626,66,0	1/1:4,10:14:27.08:657,27,0	0/0:13,0:13:36.10:0,36,602	0/0:12,0:12:30.10:0,30,545	0/0:11,0:11:30.10:0,30,551	0/0:24,0:24:69.22:0,69,1239	1/1:0,10:10:30.10:791,30,0	1/1:4,9:13:27.09:692,27,0	0/0:17,0:17:45.15:0,45,815	0/0:20,0:20:48.16:0,48,879	0/0:33,0:33:87.30:0,87,1594	0/0:20,0:20:57.19:0,57,1028	0/0:23,0:23:54.19:0,54,974	0/0:14,0:14:33.11:0,33,607	0/0:9,0:9:21.07:0,21,369	0/0:21,0:21:57.20:0,57,1048	0/0:22,0:22:61.45:0,61,1107	0/0:19,0:19:57.20:0,57,1027	0/0:7,0:7:18.06:0,18,323
chr10	84818649	.	T	TA	5115.05	PASS	AB=0.579;AC=19;AF=0.339;AN=56;BaseQRankSum=-9.238;DP=540;FS=9.600;HRun=9;HaplotypeScore=64.7521;InbreedingCoeff=0.9420;MQ=73.69;MQ0=0;MQRankSum=-2.614;QD=24.71;ReadPosRankSum=1.146;VQSLOD=5.3873;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,35:42:35.59:840,36,0	0/1:3,8:11:1.99:208,0,2	0/0:11,0:11:13.76:0,14,127	0/0:13,0:13:12.28:0,12,75	0/0:21,0:21:56.95:0,57,486	1/1:5,27:32:63.59:799,64,0	0/0:1,0:11:18.33:0,18,54	0/0:29,0:29:71.91:0,72,616	0/0:15,0:15:41.99:0,42,365	1/1:5,22:28:66.16:718,66,0	1/1:1,18:19:51.14:564,51,0	0/0:14,0:14:29.99:0,30,260	0/0:16,0:16:47.99:0,48,417	0/0:21,0:21:62.93:0,63,535	0/0:23,0:23:56.96:0,57,491	1/1:2,12:15:30.04:318,30,0	1/1:0,12:12:33.09:365,33,0	0/0:18,0:18:50.99:0,51,442	0/0:19,0:19:44.97:0,45,391	0/0:29,0:28:68.98:0,69,599	0/0:22,0:22:59.89:0,60,511	0/0:18,0:18:50.97:0,51,439	0/0:10,0:10:20.98:0,21,182	0/0:12,0:12:32.99:0,33,286	1/1:2,10:12:30.08:332,30,0	1/1:6,17:23:28.10:538,28,0	0/0:31,0:29:83.92:0,84,717	1/1:0,13:13:39.11:431,39,0
chr10	84818838	.	TGCACCCA	T	6470.24	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.499;DP=529;FS=0.438;HRun=0;HaplotypeScore=157.7139;InbreedingCoeff=0.9957;MQ=76.27;MQ0=1;MQRankSum=-13.368;QD=62.21;ReadPosRankSum=4.901;VQSLOD=4.9421;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,7:30:66.23:1701,66,0	0/0:5,0:5:15.01:0,15,471	0/0:30,0:24:56.37:0,56,1705	0/0:18,0:12:33.02:0,33,688	0/0:24,0:24:63.22:0,63,2147	1/1:17,5:22:57.20:1468,57,0	0/0:14,0:14:33.11:0,33,1096	0/0:25,0:25:65.33:0,65,2226	0/0:12,0:12:36.12:0,36,1412	0/0:18,0:18:54.18:0,54,1884	0/0:16,0:16:48.15:0,48,1604	0/0:10,0:10:27.09:0,27,1056	0/0:19,0:19:48.15:0,48,1672	0/0:15,0:15:45.15:0,45,1758	0/0:20,0:20:57.20:0,57,2152	0/0:16,0:16:42.14:0,42,1520	0/0:36,0:36:99:0,105,3860	0/0:22,0:22:63.22:0,63,2403	0/0:20,0:20:51.13:0,51,1729	0/0:21,0:21:57.20:0,57,2198	0/0:14,0:14:33.11:0,33,1084	0/0:13,0:13:39.13:0,39,1493	0/0:15,0:15:45.15:0,45,1663	0/0:12,0:12:36.12:0,36,1400	1/1:18,6:24:60.21:1547,60,0	1/1:15,1:16:36.12:924,36,0	0/0:29,0:28:84.29:0,84,3072	1/1:10,2:12:33.11:831,33,0
chr10	84818841	.	ACCC	A	2369.89	PASS	AB=0.538;AC=9;AF=0.161;AN=56;BaseQRankSum=14.112;DP=526;FS=0.909;HRun=3;HaplotypeScore=131.7292;InbreedingCoeff=0.8630;MQ=77.28;MQ0=1;MQRankSum=-13.255;QD=25.21;ReadPosRankSum=5.774;VQSLOD=0.8440;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,20:27:66.13:686,66,0	0/0:5,0:5:15.01:0,15,313	0/0:30,0:25:24.12:0,24,1189	0/0:22,0:14:36.46:0,36,586	0/0:24,0:23:63.20:0,63,1439	1/1:5,15:20:57.11:598,57,0	0/0:15,0:15:36.08:0,36,781	0/0:27,0:27:72.16:0,72,1594	0/0:12,0:12:36.12:0,36,883	0/0:18,0:18:54.18:0,54,1228	0/0:17,0:17:51.16:0,51,1153	0/0:9,0:9:27.09:0,27,662	0/0:17,0:17:48.15:0,48,1110	0/0:15,0:15:45.15:0,45,1101	0/0:19,0:19:57.20:0,57,1356	0/0:18,0:18:48.16:0,48,1134	0/0:37,0:37:99:0,108,2608	0/0:22,0:22:66.19:0,66,1554	0/0:17,0:17:51.13:0,51,1162	0/0:22,0:22:63.20:0,63,1480	0/0:12,0:12:33.11:0,33,767	0/0:15,0:15:42.14:0,42,1010	0/0:15,0:15:45.15:0,45,1077	0/0:12,0:12:36.12:0,36,883	1/1:6,15:21:60.10:603,60,0	0/1:2,12:14:33.20:316,0,33	0/0:30,0:29:84.29:0,84,2012	1/1:3,9:12:33.04:332,33,0
chr10	84818846	.	GCAAGAAAA	G	4527.89	PASS	AB=0.556;AC=9;AF=0.161;AN=56;BaseQRankSum=13.803;DP=531;FS=0.440;HRun=0;HaplotypeScore=176.8430;InbreedingCoeff=0.8598;MQ=74.33;MQ0=1;MQRankSum=-12.865;QD=47.66;ReadPosRankSum=5.365;VQSLOD=4.2452;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,20:27:66.08:1181,66,0	0/0:4,0:4:12.04:0,12,304	0/0:33,0:24:65.85:0,66,1166	0/0:22,0:12:28.78:0,29,418	0/0:25,0:25:66.16:0,66,1862	1/1:5,14:20:57.11:1022,57,0	0/0:14,0:14:41.92:0,42,726	0/0:27,0:27:71.37:0,71,1989	0/0:13,0:13:39.13:0,39,1589	0/0:16,0:16:48.14:0,48,1129	0/0:15,0:15:45.14:0,45,1019	0/0:9,0:10:27.09:0,27,1093	0/0:16,0:16:45.12:0,45,1275	0/0:15,0:15:45.15:0,45,1715	0/0:17,0:17:51.17:0,51,1861	0/0:18,0:18:48.15:0,48,1262	0/0:36,0:36:99:0,105,2847	0/0:24,0:24:72.19:0,72,2671	0/0:17,0:17:48.11:0,48,1225	0/0:23,0:23:69.20:0,69,1871	0/0:12,0:12:27.92:0,28,571	0/0:16,0:17:48.05:0,48,1312	0/0:16,0:16:45.10:0,45,1686	0/0:13,0:13:39.13:0,39,1548	1/1:6,15:21:60.04:1102,60,0	0/1:3,11:15:79.48:661,0,79	0/0:30,0:29:87.26:0,87,2365	1/1:2,9:12:31.29:562,31,0
chr10	84818850	.	GAA	G	2340.70	PASS	AB=0.694;AC=25;AF=0.446;AN=56;BaseQRankSum=6.891;DP=549;FS=17.666;HRun=15;HaplotypeScore=122.3687;InbreedingCoeff=0.6112;MQ=69.51;MQ0=4;MQRankSum=-5.847;QD=8.27;ReadPosRankSum=5.238;VQSLOD=0.2393;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:39.20:184,39,0	1/1:1,3:4:8.99:79,9,0	0/0:35,0:21:21.60:0,22,190	0/0:25,0:10:6.47:0,6,94	0/0:24,0:24:62.84:0,63,645	1/1:21,0:21:39.33:185,39,0	1/1:2,12:14:32.82:279,33,0	0/0:14,1:28:1.30:0,1,138	0/0:16,0:16:40.26:0,40,455	1/1:7,8:18:5.24:126,5,0	1/1:7,7:15:24.98:198,25,0	0/0:9,0:10:25.37:0,25,275	0/0:13,0:16:32.06:0,32,341	0/0:17,0:18:42.90:0,43,481	0/0:16,0:21:51.54:0,52,491	1/1:7,9:17:19.91:241,20,0	1/1:3,30:36:95.01:789,95,0	0/0:21,0:23:36.99:0,37,715	0/0:11,0:16:25.97:0,26,135	0/1:11,1:25:1.98:2,0,171	0/1:0,2:8:12.85:39,0,13	0/1:8,1:17:33.84:34,0,142	0/0:12,0:15:38.58:0,39,441	0/0:15,0:15:41.60:0,42,506	1/1:22,0:22:4.28:140,4,0	1/1:14,1:15:32.83:153,33,0	0/1:16,4:30:20.72:21,0,202	0/1:12,0:12:1.36:72,0,1
chr10	84819006	.	TGTCCAG	T	6809.20	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.109;DP=638;FS=13.150;HRun=0;HaplotypeScore=147.9728;InbreedingCoeff=0.9787;MQ=87.14;MQ0=0;MQRankSum=-11.433;QD=52.38;ReadPosRankSum=-3.080;VQSLOD=3.3175;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,4712	0/0:9,0:9:27.09:0,27,989	0/0:31,0:31:89.64:0,90,2839	0/0:17,0:17:51.17:0,51,1555	0/0:20,0:20:60.21:0,60,2168	0/0:22,0:22:66.21:0,66,2147	0/0:36,0:36:99:0,105,3692	1/1:8,24:32:72.23:1599,72,0	0/0:23,0:23:69.22:0,69,2351	0/0:26,0:26:78.27:0,78,2855	0/0:23,0:23:69.24:0,69,2489	0/0:14,0:14:42.14:0,42,1539	0/0:20,0:20:57.20:0,57,2057	0/0:17,0:17:51.18:0,51,1869	0/0:20,0:20:57.20:0,57,2087	0/0:23,0:23:69.22:0,69,2439	0/0:35,0:35:99:0,105,3547	0/0:23,0:23:63.18:0,63,2187	1/1:2,19:21:57.13:1134,57,0	1/1:0,16:16:42.09:978,42,0	1/1:1,15:16:33.03:738,33,0	1/1:0,18:18:36.12:885,36,0	0/0:23,0:23:69.24:0,69,2461	0/0:30,0:30:87.30:0,87,3156	0/0:21,0:21:63.22:0,63,2230	0/0:29,0:29:81.28:0,81,2954	1/1:1,26:26:60.21:1475,60,0	0/0:2,0:2:6.02:0,6,220
chr10	84819214	.	T	TC	3690.12	PASS	AB=0.959;AC=24;AF=0.429;AN=56;BaseQRankSum=0.359;DP=635;FS=5.495;HRun=9;HaplotypeScore=86.6504;InbreedingCoeff=0.8691;MQ=78.81;MQ0=1;MQRankSum=-2.852;QD=13.67;ReadPosRankSum=-1.237;VQSLOD=3.4689;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,880	1/1:2,0:10:17.04:85,17,0	0/0:22,0:23:13.03:0,13,305	0/1:12,0:13:8.30:8,0,66	0/0:29,0:29:80.98:0,81,703	0/0:21,0:21:59.96:0,60,521	0/0:26,0:26:53.98:0,54,469	1/1:13,16:29:16.18:396,16,0	0/0:26,0:26:71.96:0,72,619	1/1:3,1:15:22.88:124,23,0	1/1:2,0:7:11.36:57,11,0	0/0:23,0:23:56.95:0,57,489	0/0:30,0:30:68.97:0,69,599	0/0:24,1:25:30.27:0,30,488	0/0:43,0:43:99:0,123,1061	1/1:7,4:32:68.88:417,69,0	1/1:4,0:22:42.55:213,43,0	0/0:13,0:13:35.98:0,36,312	1/1:8,13:23:21.82:434,22,0	1/1:4,17:21:41.90:444,42,0	1/1:6,21:27:57.13:619,57,0	1/1:3,13:16:36.10:397,36,0	0/0:14,0:14:26.98:0,27,234	0/1:30,3:34:4.52:5,0,640	0/0:23,0:23:50.99:0,51,442	0/0:22,0:23:45.59:0,46,480	1/1:3,17:20:45.12:492,45,0	0/0:9,0:9:26.99:0,27,234
chr10	84819638	.	GA	G	1036.87	PASS	AB=0.907;AC=14;AF=0.250;AN=56;BaseQRankSum=3.716;DP=486;FS=9.582;HRun=11;HaplotypeScore=90.5937;InbreedingCoeff=0.6616;MQ=56.48;MQ0=16;MQRankSum=-6.560;QD=7.35;ReadPosRankSum=0.704;VQSLOD=1.7292;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:27:49.26:0,49,627	0/0:7,0:7:15.02:0,15,150	0/0:34,1:7:6.49:0,6,65	0/1:38,0:10:2.71:3,0,9	0/0:25,0:23:54.02:0,54,549	0/1:9,1:10:3.77:4,0,129	0/0:16,0:16:29.65:0,30,287	1/1:6,13:19:39.96:323,40,0	0/0:16,0:16:33.15:0,33,308	0/0:20,0:20:24.34:0,24,360	0/0:19,0:18:39.19:0,39,388	0/0:20,0:19:50.44:0,50,466	0/0:10,0:7:14.98:0,15,159	0/0:12,0:12:22.05:0,22,192	0/0:10,0:10:26.07:0,26,239	0/1:15,1:16:1.42:1,0,151	0/0:28,0:26:15.60:0,16,318	0/0:27,0:26:60.54:0,61,592	1/1:4,6:10:14.87:114,15,0	1/1:7,13:18:12.95:309,13,0	0/1:5,2:6:21.61:40,0,22	1/1:0,13:13:38.95:319,39,0	0/0:13,1:12:9.30:0,9,289	0/0:12,0:11:20.88:0,21,199	0/0:16,0:16:35.97:0,36,345	0/0:20,0:18:39.03:0,39,393	1/1:4,4:8:11.96:97,12,0	0/0:10,0:10:20.01:0,20,171
chr10	84819662	.	CA	C	577.58	PASS	AB=0.875;AC=17;AF=0.304;AN=56;BaseQRankSum=5.824;DP=502;FS=1.677;HRun=13;HaplotypeScore=122.6268;InbreedingCoeff=0.5086;MQ=56.79;MQ0=13;MQRankSum=-4.656;QD=3.57;ReadPosRankSum=-1.386;VQSLOD=1.2399;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:27:19.80:0,20,434	0/0:4,0:4:12.02:0,12,117	0/0:45,1:13:6.47:0,6,102	0/0:54,0:11:8:0,8,50	0/0:18,2:21:9.09:0,9,370	0/1:8,1:9:3.88:4,0,123	0/1:5,2:10:20.21:20,0,107	1/1:11,4:15:20.96:152,21,0	0/0:14,1:15:15.51:0,16,250	0/0:21,1:22:0.96:0,1,311	0/0:16,0:16:28.90:0,29,247	0/0:16,0:16:31.21:0,31,239	0/0:8,0:8:6.34:0,6,103	0/0:12,0:13:29.86:0,30,265	0/0:10,1:11:9.37:0,9,235	0/1:11,2:13:19.82:20,0,119	0/1:25,2:28:1.63:2,0,286	0/1:17,4:21:36.44:36,0,326	1/1:9,1:9:18.32:89,18,0	1/1:22,2:23:41.19:219,41,0	1/1:6,0:5:5.90:53,6,0	1/1:16,0:16:12.48:65,12,0	0/0:16,1:17:17.53:0,18,295	0/0:11,0:11:22.12:0,22,192	0/0:18,1:18:20.12:0,20,338	0/0:19,0:19:41.90:0,42,389	1/1:10,0:10:19.99:99,20,0	0/0:12,0:12:33:0,33,308
chr10	84819663	.	AAAAAAAAAAAAAC	A	4792.47	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.857;DP=503;FS=0.529;HRun=0;HaplotypeScore=203.0341;InbreedingCoeff=0.9678;MQ=56.57;MQ0=13;MQRankSum=-7.242;QD=59.17;ReadPosRankSum=-2.344;VQSLOD=4.1292;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:69.24:0,69,2639	0/0:4,0:4:12.04:0,12,502	0/0:49,0:12:23.09:0,23,398	0/0:55,0:11:8.20:0,8,80	0/0:22,0:21:57.20:0,57,2650	0/0:9,0:9:21.07:0,21,591	0/0:10,0:10:24.08:0,24,1238	1/1:16,0:16:29.82:741,30,0	0/0:15,0:15:45.15:0,45,1919	0/0:22,0:22:50.31:0,50,1899	0/0:17,0:16:36.12:0,36,1271	0/0:16,0:15:36.12:0,36,1991	0/0:8,0:8:21.07:0,21,809	0/0:12,0:12:30.10:0,30,1362	0/0:11,0:11:33.11:0,33,1950	0/0:13,0:13:27.09:0,27,869	0/0:28,0:28:48.15:0,48,1424	0/0:21,0:21:63.17:0,63,2671	1/1:7,3:9:21.05:668,21,0	1/1:19,5:23:51.11:1388,51,0	1/1:6,0:5:15.05:380,15,0	1/1:10,5:15:33.04:922,33,0	0/0:17,0:17:42.14:0,42,1936	0/0:12,0:11:13.21:0,13,1178	0/0:19,0:18:54.17:0,54,1626	0/0:20,0:19:48.16:0,48,1725	1/1:8,2:10:24.07:693,24,0	0/0:12,0:12:36.12:0,36,1126
chr10	84819668	.	A	ACTT	670.54	PASS	AB=0.897;AC=6;AF=0.107;AN=56;BaseQRankSum=1.417;DP=497;FS=1.813;HRun=0;HaplotypeScore=145.8884;InbreedingCoeff=-0.1229;MQ=61.46;MQ0=13;MQRankSum=-3.296;QD=8.82;ReadPosRankSum=-2.383;VQSLOD=3.2069;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.20:0,72,1217	0/0:4,0:4:12.04:0,12,224	0/0:57,0:16:23:0,23,259	0/0:59,0:13:12.45:0,12,125	0/0:22,0:21:57.19:0,57,1008	0/0:12,0:12:27.09:0,27,443	0/0:9,0:9:24.08:0,24,375	0/1:16,2:16:99:268,0,105	0/0:17,0:17:51.15:0,51,849	0/0:21,0:21:51.64:0,52,890	0/0:15,0:14:36.12:0,36,632	0/0:13,0:12:36.12:0,36,644	0/0:7,0:7:21.07:0,21,376	0/0:12,0:12:30.10:0,30,543	0/0:11,0:11:33.11:0,33,584	0/0:11,0:11:27.09:0,27,461	0/0:23,0:23:51.17:0,51,880	0/0:21,0:21:63.17:0,63,1019	0/1:10,0:9:23.14:23,0,79	0/1:20,2:21:99:160,0,286	0/1:4,2:5:63.07:148,0,63	0/1:10,1:11:99:115,0,109	0/0:15,0:15:42.14:0,42,756	0/0:14,0:13:36.04:0,36,566	0/0:20,0:19:51.10:0,51,904	0/0:20,0:19:51.12:0,51,873	0/1:8,1:9:80.21:80,0,162	0/0:12,0:12:36.12:0,36,666
chr10	84819675	.	AC	A	1475.54	PASS	AB=0.975;AC=14;AF=0.250;AN=56;BaseQRankSum=5.573;DP=496;FS=17.443;HRun=1;HaplotypeScore=137.4510;InbreedingCoeff=0.7204;MQ=63.60;MQ0=7;MQRankSum=-5.572;QD=9.97;ReadPosRankSum=-2.568;VQSLOD=-0.1398;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:27:6.37:0,6,479	0/0:4,0:4:12.03:0,12,127	0/0:59,0:20:0.10:0,0,138	0/1:54,3:16:7.83:8,0,89	0/0:21,0:21:20.87:0,21,472	0/0:12,0:12:14.98:0,15,179	0/0:10,0:10:26.49:0,26,198	1/1:13,5:16:38.43:295,38,0	0/0:17,0:17:21.02:0,21,282	0/0:19,0:19:21.33:0,21,351	0/0:14,0:13:29.45:0,29,253	0/1:12,0:12:9.61:10,0,198	0/0:6,0:6:16.91:0,17,131	0/0:11,0:11:32.41:0,32,257	0/0:11,0:11:7.26:0,7,201	0/0:13,0:13:7.77:0,8,139	0/0:23,0:23:25.37:0,25,373	0/0:21,0:21:26.68:0,27,386	1/1:10,4:14:35.36:291,35,0	1/1:12,10:22:57.32:468,57,0	1/1:0,5:5:14.60:133,15,0	1/1:6,5:11:32.20:232,32,0	0/0:15,0:15:8.09:0,8,284	0/0:15,0:14:19.80:0,20,310	0/0:18,0:17:33.28:0,33,369	0/0:21,0:20:42.87:0,43,390	1/1:2,7:9:23.74:224,24,0	0/0:11,0:11:30.44:0,30,300
chr10	84819676	.	C	CA	1280.79	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=4.871;DP=506;FS=4.005;HRun=13;HaplotypeScore=145.4057;InbreedingCoeff=0.8033;MQ=63.24;MQ0=7;MQRankSum=-6.390;QD=6.13;ReadPosRankSum=-4.921;VQSLOD=0.5383;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:58.09:0,58,557	0/0:4,0:4:12.03:0,12,128	0/1:60,0:21:1:1,0,121	0/1:57,0:17:26.86:27,0,69	0/0:21,0:21:51:0,51,515	0/0:11,0:11:24.04:0,24,241	0/0:10,0:10:29.93:0,30,269	1/1:19,7:24:39.50:414,40,0	0/0:17,0:17:38.23:0,38,381	0/0:18,0:18:31.89:0,32,392	0/0:14,0:13:28.14:0,28,266	0/0:12,0:12:27.81:0,28,252	0/0:6,0:6:15.03:0,15,153	0/0:11,0:11:29.95:0,30,288	0/0:11,0:11:24.08:0,24,276	0/0:12,0:12:23.88:0,24,246	0/0:23,0:23:44.44:0,44,438	0/0:21,0:21:55.64:0,56,551	1/1:10,6:16:27.98:345,28,0	1/1:20,3:23:34.62:365,35,0	1/1:6,0:6:7.83:57,8,0	1/1:11,1:12:7.88:128,8,0	0/0:15,0:15:32.99:0,33,325	0/0:15,0:14:35.86:0,36,366	0/0:18,0:17:39.08:0,39,402	0/0:20,0:19:37.27:0,37,417	1/1:9,0:9:12.79:126,13,0	0/0:11,0:11:33.04:0,33,331
chr10	84819684	.	TAAAC	T	6223.73	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=11.675;DP=474;FS=5.980;HRun=0;HaplotypeScore=140.1653;InbreedingCoeff=0.9727;MQ=67.93;MQ0=6;MQRankSum=-12.122;QD=27.18;ReadPosRankSum=1.956;VQSLOD=4.2379;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:41.14:355,41,0	1/1:3,0:3:9.02:90,9,0	0/0:54,0:25:20.51:0,21,714	0/0:50,0:22:22.33:0,22,611	0/0:17,0:17:45.14:0,45,1024	1/1:7,0:11:21.04:207,21,0	0/0:10,0:10:24.07:0,24,556	1/1:0,24:22:60.10:1040,60,0	0/0:16,0:16:42.14:0,42,1032	1/1:16,0:16:30.02:278,30,0	1/1:15,0:14:23.92:204,24,0	0/0:11,0:11:33.04:0,33,736	0/0:5,0:5:15.05:0,15,374	0/0:11,0:11:27.09:0,27,649	0/0:13,0:13:36.05:0,36,814	1/1:11,0:11:24.04:237,24,0	1/1:23,0:23:32.75:410,33,0	0/0:20,0:20:41.13:0,41,924	1/1:4,11:15:35.31:549,35,0	1/1:0,19:19:51.17:912,51,0	1/1:0,5:5:6.49:109,6,0	1/1:0,11:11:33.11:565,33,0	0/0:14,0:14:36.12:0,36,811	0/0:18,0:18:54.19:0,54,1296	1/1:14,0:14:27.05:265,27,0	1/1:19,0:18:32.65:303,33,0	1/1:0,8:8:21.07:373,21,0	1/1:11,0:11:33.06:327,33,0
chr10	84819686	.	AACAAAC	A	6445.54	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=10.970;DP=469;FS=8.829;HRun=0;HaplotypeScore=153.9154;InbreedingCoeff=0.8076;MQ=67.64;MQ0=5;MQRankSum=-11.051;QD=29.30;ReadPosRankSum=2.368;VQSLOD=4.3494;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:57.12:923,57,0	1/1:3,0:3:9.03:189,9,0	0/0:56,0:27:34.56:0,35,1191	0/0:49,0:22:37.34:0,37,832	0/0:17,0:17:48.15:0,48,1467	1/1:11,0:11:24.05:437,24,0	0/0:10,0:10:26.98:0,27,791	0/1:24,0:22:8.33:20,0,8	0/0:17,0:17:45.15:0,45,1483	1/1:8,7:15:36.57:685,37,0	1/1:9,5:13:27.05:465,27,0	0/0:11,0:11:33.11:0,33,1029	0/0:6,0:6:18.06:0,18,574	0/0:10,0:10:30.05:0,30,918	0/0:13,0:13:14.25:0,14,1078	1/1:7,3:10:24.08:509,24,0	1/1:19,4:23:49.05:1005,49,0	0/0:20,0:20:31.79:0,32,1336	0/1:15,0:15:23.29:23,0,25	1/1:19,0:19:18.56:45,19,0	0/0:5,0:5:0.41:0,0,13	1/1:11,0:11:13.42:38,13,0	0/0:14,0:14:42.11:0,42,1175	0/0:18,0:18:54.19:0,54,1779	1/1:14,0:14:39.02:635,39,0	1/1:19,0:18:48.04:765,48,0	1/1:8,0:8:7.95:26,8,0	1/1:11,0:11:33.11:680,33,0
chr10	84819687	.	ACAAAC	A	6504.28	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=11.430;DP=458;FS=7.153;HRun=0;HaplotypeScore=144.6776;InbreedingCoeff=0.8815;MQ=67.20;MQ0=5;MQRankSum=-11.070;QD=29.30;ReadPosRankSum=2.201;VQSLOD=4.4130;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,13:22:57.12:853,57,0	1/1:0,3:3:9.03:171,9,0	0/0:52,0:27:34.95:0,35,1167	0/0:49,0:21:10.51:0,11,711	0/0:16,0:16:48.15:0,48,1330	1/1:5,6:11:24.05:396,24,0	0/0:9,0:9:26.98:0,27,713	1/1:24,0:22:41.89:239,42,0	0/0:16,0:16:45.15:0,45,1327	1/1:8,6:14:36.10:614,36,0	1/1:5,7:11:27.05:419,27,0	0/0:11,0:11:33.11:0,33,900	0/0:6,0:6:18.06:0,18,535	0/0:10,0:10:30.05:0,30,819	0/0:13,0:13:14.25:0,14,951	1/1:3,7:10:24.08:448,24,0	1/1:10,13:23:49.05:859,49,0	0/0:19,0:19:29.83:0,30,1182	1/1:15,0:15:2.62:135,3,0	1/1:19,0:19:48.16:231,48,0	0/1:5,0:5:8.31:19,0,8	1/1:11,0:11:28.84:140,29,0	0/0:14,0:14:42.11:0,42,1056	0/0:18,0:18:54.19:0,54,1599	1/1:5,9:14:39.02:582,39,0	1/1:1,18:18:48.04:706,48,0	1/1:9,0:9:6.93:80,7,0	1/1:1,10:11:33.11:613,33,0
chr10	84819691	.	AC	A	1839.64	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=13.638;DP=468;FS=9.838;HRun=1;HaplotypeScore=133.6728;InbreedingCoeff=0.7103;MQ=71.99;MQ0=4;MQRankSum=-12.320;QD=8.25;ReadPosRankSum=3.660;VQSLOD=0.5350;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:39.39:184,39,0	1/1:3,0:3:8.23:36,8,0	0/0:51,3:31:11.77:0,12,536	0/0:48,3:26:19.12:0,19,395	0/0:18,0:18:51.04:0,51,601	1/1:10,0:10:18.25:74,18,0	0/0:9,0:9:24.06:0,24,306	0/1:26,0:24:10.53:206,0,11	0/0:18,0:18:53.16:0,53,638	1/1:14,0:14:28.26:172,28,0	1/1:12,0:11:25.50:151,25,0	0/0:11,0:11:19.33:0,19,365	0/0:8,0:8:24.05:0,24,286	0/0:9,0:9:26.81:0,27,308	0/0:12,0:12:34.76:0,35,390	1/1:10,0:10:22.19:103,22,0	1/1:18,5:23:30.07:220,30,0	0/0:20,0:20:17.48:0,17,460	1/1:14,0:14:33.73:177,34,0	1/1:21,0:21:3.27:191,3,0	0/1:6,0:6:7.77:20,0,8	0/1:13,0:13:6.21:108,0,6	0/0:16,0:16:37.46:0,37,435	0/0:18,0:18:53.64:0,54,660	1/1:12,0:12:23.95:96,24,0	1/1:20,0:19:25.85:126,26,0	0/1:10,0:10:8.71:71,0,9	1/1:11,0:11:29.30:119,29,0
chr10	84819698	.	AAAC	A	2311.40	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=7.327;DP=481;FS=12.875;HRun=0;HaplotypeScore=149.0934;InbreedingCoeff=0.9495;MQ=72.82;MQ0=4;MQRankSum=-9.907;QD=16.05;ReadPosRankSum=3.142;VQSLOD=2.4158;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,12:23:39.83:383,40,0	1/1:3,0:3:8.98:72,9,0	0/0:54,0:34:85.20:0,85,1265	0/0:45,0:30:66.27:0,66,1094	0/0:17,0:17:51.17:0,51,1072	1/1:5,6:11:20.79:213,21,0	0/0:9,0:9:24.08:0,24,520	0/0:30,0:28:59.45:0,59,430	0/0:19,0:19:57.20:0,57,1282	1/1:14,0:14:17.72:141,18,0	1/1:13,0:12:17.81:126,18,0	0/0:10,0:10:30.07:0,30,645	0/0:9,0:9:27.09:0,27,591	0/0:9,0:9:27.06:0,27,596	0/0:11,0:11:33.10:0,33,681	1/1:12,0:12:22.87:189,23,0	1/1:22,0:22:41.22:318,41,0	0/0:21,0:21:63:0,63,1192	0/0:12,0:12:1.30:0,1,30	0/0:23,0:23:47.79:0,48,321	0/0:7,0:7:13.01:0,13,138	0/0:14,0:14:22.51:0,23,185	0/0:16,0:16:48.10:0,48,896	0/0:19,0:19:57.20:0,57,1298	1/1:8,9:17:28.65:324,29,0	1/1:8,9:17:35.35:383,35,0	0/0:11,0:11:22.73:0,23,167	1/1:2,10:12:33.03:379,33,0
chr10	84819699	.	AAC	A	2371.36	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=7.350;DP=481;FS=17.035;HRun=0;HaplotypeScore=140.7723;InbreedingCoeff=0.9816;MQ=73.11;MQ0=3;MQRankSum=-10.044;QD=16.58;ReadPosRankSum=1.707;VQSLOD=2.3940;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:24:47.13:405,47,0	1/1:0,3:3:9.01:86,9,0	0/0:52,1:35:79.98:0,80,939	0/0:44,0:30:67.83:0,68,923	0/0:18,0:18:53.13:0,53,829	1/1:11,0:11:23.40:211,23,0	0/0:9,0:9:24.06:0,24,395	0/0:30,0:28:70.41:0,70,473	0/0:19,0:19:57.19:0,57,1045	1/1:8,6:14:21.68:176,22,0	1/1:6,7:12:18.78:146,19,0	0/0:10,0:10:27.09:0,27,491	0/0:9,0:9:27.09:0,27,487	0/0:9,0:9:24.08:0,24,462	0/0:11,0:11:30.10:0,30,509	1/1:5,7:12:26.35:228,26,0	1/1:9,13:22:47.14:369,47,0	0/0:21,0:21:63.04:0,63,931	0/0:12,0:12:13.44:0,13,73	0/0:23,0:23:56.72:0,57,360	0/0:8,0:8:14.15:0,14,131	0/0:14,0:14:31.42:0,31,218	0/0:16,0:16:42.08:0,42,682	0/0:19,0:19:57.18:0,57,1025	1/1:16,0:16:30.22:293,30,0	1/1:16,0:16:35.74:343,36,0	0/0:11,0:11:26.91:0,27,192	1/1:12,0:12:33.07:334,33,0
chr10	84820126	.	G	GA	7267.22	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-2.056;DP=578;FS=1.089;HRun=10;HaplotypeScore=136.3003;InbreedingCoeff=0.9668;MQ=74.98;MQ0=0;MQRankSum=-1.172;QD=21.37;ReadPosRankSum=-0.431;VQSLOD=3.3810;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:34:81.04:846,81,0	1/1:1,0:1:2.94:18,3,0	0/0:20,0:19:19.79:0,20,232	0/0:20,0:18:31.91:0,32,243	0/0:32,0:33:82.93:0,83,671	1/1:2,19:20:51.13:543,51,0	0/0:0,0:12:24.44:0,24,71	1/1:8,26:34:26.38:769,26,0	0/0:21,0:19:56.91:0,57,464	1/1:31,0:31:80.27:447,80,0	1/1:30,0:30:76.88:528,77,0	0/0:21,0:21:53.91:0,54,439	0/0:19,0:19:44.92:0,45,366	0/0:14,0:15:31.04:0,31,233	0/0:18,0:18:50.93:0,51,419	1/1:21,0:21:55.92:357,56,0	1/1:13,0:13:38.28:241,38,0	0/0:8,0:8:17.98:0,18,148	1/1:6,10:15:33.06:341,33,0	1/1:4,26:31:50.35:712,50,0	1/1:2,8:10:15.04:160,15,0	1/1:2,19:21:51.13:544,51,0	0/0:26,0:27:40.01:0,40,468	0/0:21,0:20:59.93:0,60,492	1/1:5,20:25:60.15:640,60,0	1/1:5,12:18:41.70:385,42,0	1/1:1,24:25:56.93:608,57,0	1/1:3,4:7:12.03:128,12,0
chr10	84820130	.	A	AC	4418	PASS	AB=0.995;AC=23;AF=0.411;AN=56;BaseQRankSum=2.005;DP=571;FS=2.670;HRun=0;HaplotypeScore=137.6858;InbreedingCoeff=0.3262;MQ=75.94;MQ0=0;MQRankSum=-2.712;QD=12.96;ReadPosRankSum=3.754;VQSLOD=5.6168;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:44.62:113,0,45	1/1:0,2:2:3.01:42,3,0	0/0:20,0:19:53.76:0,54,577	0/0:22,0:18:44.73:0,45,510	0/0:31,0:31:90.24:0,90,1201	1/1:21,0:20:17.92:94,18,0	0/0:13,0:13:38.61:0,39,265	0/1:35,0:35:62.67:63,0,203	0/0:22,0:20:60.19:0,60,809	1/1:0,31:31:93.24:1238,93,0	1/1:1,30:31:84.08:1108,84,0	0/0:20,0:20:60.18:0,60,799	0/0:19,0:19:57.15:0,57,729	0/0:12,0:11:33.02:0,33,415	0/0:18,0:18:54.17:0,54,736	1/1:0,22:22:60.13:810,60,0	1/1:1,14:15:39.12:538,39,0	0/0:8,0:8:21.05:0,21,274	0/1:15,0:14:21.60:22,0,33	0/1:31,0:31:99:101,0,112	0/1:11,0:11:6.93:7,0,60	0/1:22,0:22:54.73:63,0,55	0/0:24,0:24:70.01:0,70,890	0/0:21,0:20:63.20:0,63,862	0/1:23,0:23:22.34:56,0,22	0/1:19,1:19:48.34:48,0,92	1/1:24,0:24:35.86:105,36,0	0/1:5,0:5:9.74:10,0,16
chr10	84820193	.	TAA	T	290.53	PASS	AB=0.679;AC=1;AF=0.018;AN=56;BaseQRankSum=2.761;DP=696;FS=5.133;HRun=3;HaplotypeScore=85.8106;InbreedingCoeff=-0.0206;MQ=63.08;MQ0=9;MQRankSum=-0.233;QD=15.29;ReadPosRankSum=-0.608;VQSLOD=0.4918;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1911	0/0:9,0:9:27.09:0,27,492	0/0:13,0:9:18.01:0,18,308	0/0:9,0:3:9.03:0,9,173	0/0:30,0:30:90.26:0,90,1615	0/0:32,0:32:96.32:0,96,1823	0/1:10,9:18:99:365,0,326	0/0:41,0:38:99:0,108,1925	0/0:19,0:19:54.19:0,54,1017	0/0:43,0:42:99:0,126,2347	0/0:32,0:32:90.25:0,90,1632	0/0:22,0:22:66.23:0,66,1265	0/0:19,0:19:51.17:0,51,986	0/0:16,0:16:45.15:0,45,870	0/0:43,0:43:99:0,129,2455	0/0:24,0:23:66.19:0,66,1222	0/0:31,0:30:81.23:0,81,1504	0/0:15,0:15:45.11:0,45,831	0/0:17,0:15:42.14:0,42,801	0/0:24,0:24:69.23:0,69,1332	0/0:19,0:19:51.16:0,51,952	0/0:22,0:22:63.22:0,63,1210	0/0:19,0:19:57.18:0,57,1067	0/0:19,0:19:51.17:0,51,954	0/0:35,0:35:99:0,102,1904	0/0:49,0:49:99:0,148,2831	0/0:25,0:25:69.23:0,69,1294	0/0:15,0:15:45.15:0,45,869
chr10	84820287	.	TCGGGAC	T	1411.32	PASS	AB=0.736;AC=5;AF=0.089;AN=56;BaseQRankSum=9.083;DP=667;FS=3.236;HRun=0;HaplotypeScore=143.8531;InbreedingCoeff=-0.0983;MQ=60.35;MQ0=7;MQRankSum=-8.023;QD=14.86;ReadPosRankSum=3.994;VQSLOD=3.1430;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,4004	0/1:6,3:9:99:139,0,356	0/0:14,0:7:21.07:0,21,698	0/0:20,0:13:34.36:0,34,1091	0/0:19,0:19:57.20:0,57,1968	0/0:38,0:38:99:0,114,4055	0/0:38,0:37:99:0,108,3820	0/0:45,0:43:99:0,117,3794	0/0:14,0:12:33.11:0,33,1207	0/1:24,5:28:99:240,0,1366	0/1:9,10:18:99:392,0,484	0/0:24,0:24:66.21:0,66,2253	0/0:10,0:10:30.10:0,30,1094	0/0:17,0:16:48.16:0,48,1728	0/0:38,0:38:99:0,108,3837	0/1:15,8:23:99:383,0,1332	0/1:8,7:15:99:375,0,171	0/0:13,0:13:39.13:0,39,1399	0/0:17,0:16:42.14:0,42,1346	0/0:27,0:27:72.19:0,72,2457	0/0:28,0:28:84.28:0,84,2865	0/0:23,0:23:57.20:0,57,1938	0/0:25,0:25:72.25:0,72,2480	0/0:25,0:25:69.19:0,69,2364	0/0:32,0:31:90.27:0,90,3152	0/0:37,1:36:32.45:0,32,3115	0/0:14,0:14:42.14:0,42,1486	0/0:13,0:13:39.13:0,39,1350
chr10	84820297	.	CCTCGGG	C	1436.50	PASS	AB=0.734;AC=5;AF=0.089;AN=56;BaseQRankSum=9.399;DP=685;FS=5.806;HRun=0;HaplotypeScore=154.2394;InbreedingCoeff=-0.0981;MQ=64.48;MQ0=3;MQRankSum=-7.745;QD=15.79;ReadPosRankSum=4.582;VQSLOD=2.2868;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,4037	0/1:4,3:7:99:147,0,319	0/0:15,0:12:36.11:0,36,1113	0/0:17,0:15:38.48:0,38,1305	0/0:21,0:21:63.22:0,63,2079	0/0:39,0:39:99:0,117,3986	0/0:37,0:37:99:0,111,3672	0/0:48,0:48:99:0,141,4676	0/0:16,0:14:42.14:0,42,1462	0/1:16,5:20:99:240,0,1030	0/1:15,8:23:99:410,0,571	0/0:21,0:21:63.19:0,63,2027	0/0:13,0:13:36.12:0,36,1283	0/0:17,0:17:51.16:0,51,1775	0/0:38,0:38:99:0,114,4010	0/1:19,8:27:99:389,0,1473	0/1:6,7:13:99:368,0,233	0/0:16,0:16:48.16:0,48,1587	0/0:16,0:15:45.15:0,45,1405	0/0:26,0:26:75.26:0,75,2515	0/0:29,0:29:87.30:0,87,3043	0/0:21,0:21:54.19:0,54,1861	0/0:29,0:29:87.29:0,87,2834	0/0:26,0:26:75.26:0,75,2612	0/0:39,0:39:99:0,117,3821	0/0:33,1:33:29.52:0,30,3057	0/0:20,0:20:60.19:0,60,1973	0/0:16,0:16:48.16:0,48,1564
chr10	84820533	.	T	TGGTC	7284.48	PASS	AB=0.766;AC=6;AF=0.107;AN=56;BaseQRankSum=-14.124;DP=963;FS=7.055;HRun=0;HaplotypeScore=199.0660;InbreedingCoeff=0.2533;MQ=67.17;MQ0=0;MQRankSum=-0.946;QD=36.61;ReadPosRankSum=2.049;VQSLOD=4.2428;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1844	0/1:16,1:17:99:109,0,788	0/0:26,0:25:66.66:0,67,1101	0/0:20,0:19:51.17:0,51,889	0/0:24,0:24:66.21:0,66,1185	0/0:49,0:49:99:0,138,2546	0/0:42,0:41:99:0,108,1942	0/0:74,0:74:99:0,187,3299	0/0:28,0:28:75.26:0,75,1384	0/1:31,16:47:99:1458,0,1045	0/1:24,19:42:99:1389,0,737	0/0:33,0:33:96.33:0,96,1774	0/0:28,0:28:66.23:0,66,1232	0/0:24,0:24:63.22:0,63,1169	0/0:62,0:62:99:0,175,3146	0/1:28,16:45:99:1383,0,989	1/1:8,37:46:99:2947,111,0	0/0:17,0:17:42.14:0,42,767	0/0:20,0:20:57.19:0,57,1028	0/0:21,0:21:54.18:0,54,978	0/0:47,0:47:99:0,132,2364	0/0:33,0:33:90.28:0,90,1616	0/0:22,0:22:63.22:0,63,1153	0/0:25,0:25:69.24:0,69,1276	0/0:33,0:33:90.29:0,90,1646	0/0:48,0:48:99:0,132,2433	0/0:30,0:30:84.27:0,84,1502	0/0:23,0:23:60.21:0,60,1115
chr10	84820574	.	CTGGGGACGAA	C	14889.69	PASS	AB=0.707;AC=11;AF=0.196;AN=56;BaseQRankSum=16.617;DP=1004;FS=2.613;HRun=0;HaplotypeScore=322.2102;InbreedingCoeff=-0.2444;MQ=67.47;MQ0=0;MQRankSum=-16.941;QD=32.16;ReadPosRankSum=1.587;VQSLOD=3.6042;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,157,8051	0/1:8,7:14:99:564,0,711	0/0:27,0:22:60.18:0,60,2829	0/0:33,0:31:87.30:0,87,3749	0/0:17,0:17:51.18:0,51,2555	0/1:28,21:49:99:1380,0,3776	0/1:28,20:47:99:1668,0,3251	0/1:37,21:57:99:1729,0,4074	0/0:39,0:39:99:0,114,5868	0/1:32,23:54:99:1871,0,3823	0/1:24,6:28:99:331,0,2856	0/0:33,0:33:96.33:0,96,5038	0/0:29,0:29:87.30:0,87,4529	0/0:30,0:30:90.30:0,90,4577	0/1:30,20:50:99:1768,0,3756	0/1:35,22:57:99:2044,0,4612	0/0:46,0:46:99:0,129,6532	0/0:23,0:23:69.24:0,69,3588	0/0:31,0:31:87.29:0,87,4202	0/0:26,0:26:72.25:0,72,3730	0/0:48,0:48:99:0,144,7267	0/0:25,0:25:72.24:0,72,3621	0/0:25,0:25:75.26:0,75,3915	0/0:29,0:29:87.30:0,87,4503	0/1:16,18:33:99:1222,0,1950	0/1:28,22:50:99:1654,0,3481	0/0:27,0:27:78.27:0,78,3927	0/1:7,10:17:99:658,0,1079
chr10	84820820	.	C	CA	4367.18	PASS	AB=0.686;AC=6;AF=0.107;AN=56;BaseQRankSum=-13.401;DP=859;FS=0.402;HRun=0;HaplotypeScore=83.4827;InbreedingCoeff=0.2532;MQ=67.58;MQ0=0;MQRankSum=1.707;QD=24.53;ReadPosRankSum=2.802;VQSLOD=5.6349;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:99:0,114,1573	0/1:12,8:20:99:323,0,437	0/0:26,0:24:66.20:0,66,882	0/0:26,0:26:75.20:0,75,969	0/0:21,0:21:60.20:0,60,826	0/0:43,0:43:99:0,123,1693	0/0:51,0:51:99:0,151,2091	0/0:49,0:49:99:0,138,1903	0/0:27,0:27:78.17:0,78,1040	0/1:22,18:40:99:697,0,795	0/1:15,10:25:99:362,0,494	0/0:28,0:28:78.22:0,78,1062	0/0:34,0:34:99:0,99,1382	0/0:24,0:24:66.22:0,66,921	0/0:52,0:52:99:0,153,2100	0/1:21,31:52:99:1115,0,599	1/1:0,41:41:99:1870,117,0	0/0:20,0:20:57.19:0,57,796	0/0:14,0:14:39.11:0,39,523	0/0:15,0:15:39.12:0,39,527	0/0:32,0:32:90.25:0,90,1201	0/0:19,0:19:54.14:0,54,728	0/0:15,0:15:45.14:0,45,613	0/0:41,0:41:99:0,123,1718	0/0:35,0:35:99:0,99,1382	0/0:43,0:43:99:0,120,1646	0/0:16,0:16:48.15:0,48,650	0/0:10,0:10:30.10:0,30,419
chr10	84821216	.	A	AAAAG	17417.28	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-4.835;DP=548;FS=3.528;HRun=0;HaplotypeScore=89.2741;InbreedingCoeff=0.9782;MQ=72.89;MQ0=0;MQRankSum=-10.525;QD=56.55;ReadPosRankSum=0.750;VQSLOD=6.1195;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,46:55:99:3222,126,0	1/1:3,5:8:12.04:312,12,0	0/0:14,0:14:33.11:0,33,598	0/0:15,0:14:30.09:0,30,495	0/0:14,0:14:36.11:0,36,614	1/1:4,18:24:48.16:1213,48,0	0/0:26,0:26:72.25:0,72,1300	1/1:10,12:22:42.14:1075,42,0	0/0:25,0:25:72.25:0,72,1309	1/1:8,15:23:45.14:1084,45,0	1/1:2,8:10:21.03:467,21,0	0/0:21,0:21:54.19:0,54,982	0/0:18,0:18:48.16:0,48,873	0/0:23,0:23:60.21:0,60,1091	0/0:21,0:21:54.19:0,54,972	1/1:1,17:18:51.18:1335,51,0	1/1:3,24:27:66.23:1727,66,0	0/0:28,0:28:78.25:0,78,1377	1/1:2,8:10:24.08:628,24,0	1/1:1,17:18:48.16:1201,48,0	1/1:3,18:21:48.16:1181,48,0	1/1:5,6:11:21.07:547,21,0	0/0:8,0:8:24.08:0,24,437	0/0:27,0:27:78.22:0,78,1384	1/1:2,7:9:18.06:471,18,0	1/1:2,19:22:60.19:1416,60,0	1/1:5,19:26:54.19:1390,54,0	1/1:2,1:3:6.02:146,6,0
chr10	84821386	.	GGCACGA	G	3574.85	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.981;DP=437;FS=0.000;HRun=0;HaplotypeScore=103.3751;InbreedingCoeff=0.9730;MQ=87.23;MQ0=0;MQRankSum=-9.759;QD=46.43;ReadPosRankSum=-3.135;VQSLOD=2.8890;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.26:0,75,2682	0/0:5,0:5:15.05:0,15,502	0/0:21,0:21:60.19:0,60,2011	0/0:14,0:14:42.14:0,42,1428	0/0:19,0:19:57.20:0,57,2058	0/0:15,0:15:45.15:0,45,1691	0/0:18,0:18:54.19:0,54,1981	1/1:6,22:28:44.49:1412,44,0	0/0:16,0:16:48.16:0,48,1734	0/0:28,0:28:81.27:0,81,2813	0/0:16,0:16:39.13:0,39,1462	0/0:10,0:10:30.10:0,30,1124	0/0:9,0:9:27.09:0,27,1015	0/0:13,0:13:39.13:0,39,1467	0/0:17,0:17:51.18:0,51,1917	0/0:18,0:18:54.14:0,54,1847	0/0:30,0:30:90.31:0,90,3211	0/0:26,0:26:78.27:0,78,2864	1/1:2,5:7:14.13:238,14,0	1/1:0,9:9:24.08:575,24,0	1/1:6,15:21:27.08:598,27,0	1/1:1,4:5:12.04:255,12,0	0/0:13,0:13:36.12:0,36,1211	0/0:20,0:20:60.16:0,60,2097	0/0:12,0:12:36.12:0,36,1352	0/0:11,0:11:33.11:0,33,1203	1/1:0,7:7:21.07:498,21,0	0/0:3,0:3:9.03:0,9,339
chr10	84821457	.	GTGAT	G	846.43	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=6.051;DP=218;FS=28.780;HRun=0;HaplotypeScore=66.5739;InbreedingCoeff=0.8541;MQ=91.84;MQ0=1;MQRankSum=-5.155;QD=13.88;ReadPosRankSum=3.150;VQSLOD=1.6002;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.13:0,39,1061	1/1:3,3:7:12.02:186,12,0	0/0:10,0:10:30.08:0,30,720	0/0:18,0:13:33.11:0,33,903	0/0:9,0:9:27.09:0,27,754	0/0:5,0:5:15.05:0,15,391	0/0:5,0:5:15.05:0,15,418	0/0:15,0:15:42.14:0,42,1174	0/0:2,0:2:6.02:0,6,168	1/1:13,6:19:15.02:244,15,0	1/1:12,6:18:24.47:334,24,0	0/0:6,0:6:15.05:0,15,420	0/0:5,0:5:15.05:0,15,382	0/0:7,0:7:21.07:0,21,586	0/0:7,0:7:21.07:0,21,585	1/1:7,3:10:9.03:163,9,0	1/1:6,1:7:6.01:79,6,0	0/0:8,0:8:24.08:0,24,671	0/0:5,0:5:15.05:0,15,386	0/0:5,0:5:15.05:0,15,306	0/0:4,0:4:8.99:0,9,187	0/0:4,0:4:9.03:0,9,191	0/0:9,0:9:27.09:0,27,755	./.	0/0:4,0:4:12.04:0,12,336	0/0:6,0:6:18.06:0,18,504	0/0:4,0:4:12.04:0,12,276	0/0:4,0:4:12.04:0,12,226
chr10	84821464	.	CTCAGGGATATATATATATATATATATATATATATATAT	C	4933	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=6.735;DP=166;FS=31.020;HRun=0;HaplotypeScore=161.6843;InbreedingCoeff=0.7296;MQ=95.10;MQ0=1;MQRankSum=-5.640;QD=274.06;ReadPosRankSum=5.753;VQSLOD=3.1741;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:36.12:0,36,2234	1/1:0,3:3:9.03:886,9,0	0/0:9,0:8:24.07:0,24,789	0/0:19,0:11:33.11:0,33,1090	0/0:8,0:8:24.05:0,24,975	0/0:5,0:5:12.04:0,12,490	0/0:4,0:4:12.04:0,12,565	0/0:16,0:16:47.99:0,48,2397	0/0:3,0:3:9.03:0,9,582	1/1:1,4:5:14.26:1192,14,0	1/1:0,6:6:18.06:1676,18,0	0/0:5,0:5:15.05:0,15,810	0/0:4,0:4:12.04:0,12,880	0/0:6,0:6:18.06:0,18,1124	0/0:5,0:5:15.05:0,15,607	1/1:0,3:3:9.03:885,9,0	1/1:0,1:1:3.01:295,3,0	0/0:10,0:10:30.06:0,30,3432	0/0:5,0:5:15:0,15,662	0/0:5,0:5:3.01:0,3,478	0/0:4,0:4:9.03:0,9,470	0/0:3,0:3:3.01:0,3,55	0/0:9,0:9:27.09:0,27,1569	./.	0/0:4,0:4:12.04:0,12,540	0/0:6,0:6:18.06:0,18,951	0/0:4,0:4:6.02:0,6,222	0/0:1,0:1:3.01:0,3,112
chr10	84821554	.	C	CCT	10627.61	PASS	AB=0.975;AC=54;AF=0.964;AN=56;BaseQRankSum=0.670;DP=256;FS=0.000;HRun=0;HaplotypeScore=137.6938;InbreedingCoeff=-0.0722;MQ=88.87;MQ0=0;MQRankSum=-3.572;QD=41.51;ReadPosRankSum=3.963;VQSLOD=6.0019;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,5:6:15.05:281,15,0	1/1:0,8:8:21.07:417,21,0	0/1:32,0:20:82.51:83,0,223	0/1:17,0:13:48.52:49,0,124	1/1:0,6:6:15.05:303,15,0	1/1:4,5:10:21.07:417,21,0	1/1:2,7:9:24.08:464,24,0	1/1:7,12:19:51.13:952,51,0	1/1:0,11:11:33.11:669,33,0	1/1:1,10:11:33.04:589,33,0	1/1:0,12:12:24.08:486,24,0	1/1:2,8:10:30.06:520,30,0	1/1:1,5:6:15.05:281,15,0	1/1:0,8:8:24.08:486,24,0	1/1:2,12:14:33.11:667,33,0	1/1:2,15:17:45.15:887,45,0	1/1:2,12:14:36.12:704,36,0	1/1:0,10:10:27.09:548,27,0	1/1:2,6:8:24.04:446,24,0	1/1:0,1:1:3.01:61,3,0	1/1:0,2:2:6.02:92,6,0	1/1:1,4:5:12.04:243,12,0	1/1:0,3:3:9.03:182,9,0	1/1:0,1:1:3.01:40,3,0	1/1:0,1:1:3.01:61,3,0	1/1:1,5:6:18.06:335,18,0	1/1:0,5:4:12.04:243,12,0	1/1:0,2:2:6.02:122,6,0
chr10	84821572	.	GGA	G	8087.35	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=2.918;DP=261;FS=1.273;HRun=0;HaplotypeScore=161.4002;InbreedingCoeff=0.6818;MQ=81.54;MQ0=1;MQRankSum=-5.071;QD=40.44;ReadPosRankSum=4.329;VQSLOD=5.5627;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:27.05:381,27,0	1/1:1,3:4:11.95:153,12,0	0/0:42,0:21:37.65:0,38,592	0/0:19,0:12:20.15:0,20,356	1/1:0,5:5:12.04:181,12,0	1/1:1,11:12:33.11:499,33,0	1/1:1,9:10:27.09:401,27,0	1/1:0,19:19:57.13:816,57,0	1/1:0,14:14:39.09:563,39,0	1/1:0,11:11:29.98:389,30,0	1/1:0,6:8:20.91:265,21,0	1/1:0,11:11:30.10:452,30,0	1/1:0,7:7:15.05:227,15,0	1/1:0,9:9:27.09:400,27,0	1/1:0,12:12:36.12:545,36,0	1/1:0,15:15:42.14:633,42,0	1/1:0,11:12:36.09:521,36,0	1/1:0,7:7:21.07:320,21,0	1/1:1,6:7:21.03:288,21,0	1/1:0,1:1:3.01:45,3,0	./.	1/1:0,5:5:15.05:227,15,0	1/1:0,3:3:9.03:136,9,0	1/1:0,3:3:6.02:90,6,0	1/1:0,1:1:3.01:45,3,0	1/1:2,6:8:23.97:308,24,0	1/1:0,5:4:12.04:182,12,0	1/1:1,0:1:2.94:18,3,0
chr10	84822240	.	A	AACACACACACACACAC	12906.38	PASS	AB=1.000;AC=29;AF=0.558;AN=52;BaseQRankSum=7.489;DP=605;FS=3.344;HRun=0;HaplotypeScore=266.7648;InbreedingCoeff=0.7982;MQ=75.76;MQ0=1;MQRankSum=-11.148;QD=42.46;ReadPosRankSum=-7.052;VQSLOD=2.1594;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:4.23:25,4,0	1/1:4,0:3:3.01:194,3,0	0/0:53,0:40:36.10:0,36,1127	0/0:35,0:33:11.67:0,12,438	0/0:20,0:21:33.10:0,33,1252	1/1:19,6:26:20.38:1546,20,0	0/1:25,0:25:88.21:88,0,1847	1/1:31,0:29:45.08:1367,45,0	0/0:30,0:30:75.23:0,75,2925	1/1:17,0:16:33.11:1828,33,0	1/1:5,0:5:1.13:85,1,0	0/0:25,0:25:69.24:0,69,2785	0/0:17,0:17:42.14:0,42,1655	0/0:21,0:24:48.16:0,48,2009	0/0:28,0:30:66.21:0,66,2713	1/1:21,0:20:18.50:516,19,0	1/1:13,0:12:23.99:1392,24,0	0/0:16,0:16:33.11:0,33,1309	1/1:23,0:23:30.08:1032,30,0	./.	1/1:16,0:16:8.96:85,9,0	1/1:16,0:16:15.05:900,15,0	0/0:13,0:14:27.09:0,27,984	0/0:29,0:29:60.17:0,60,2401	1/1:5,1:7:3.01:228,3,0	1/1:41,0:40:49.96:1865,50,0	1/1:27,0:27:42.11:1754,42,0	./.
chr10	84822265	.	AGG	A	1150.75	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=5.904;DP=537;FS=0.579;HRun=3;HaplotypeScore=85.5488;InbreedingCoeff=0.7527;MQ=78.71;MQ0=0;MQRankSum=-2.305;QD=14.03;ReadPosRankSum=-1.516;VQSLOD=0.0226;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:22:3.01:35,3,0	0/0:2,0:2:3.01:0,3,44	0/0:47,0:38:99:0,110,1854	0/0:34,0:31:89.08:0,89,1351	0/0:16,0:16:47.99:0,48,831	1/1:20,0:19:19.82:187,20,0	0/0:29,0:29:81.28:0,81,1484	0/0:32,0:32:70.03:0,70,1464	0/0:31,0:31:90.30:0,90,1651	0/0:15,0:15:45.10:0,45,741	0/1:4,0:4:13.04:13,0,45	0/0:34,0:34:99:0,99,1833	0/0:18,0:18:51.16:0,51,922	0/0:26,0:26:69.11:0,69,1184	0/0:27,0:27:81.03:0,81,1438	0/0:13,0:13:21.01:0,21,303	0/0:14,0:13:32.62:0,33,392	0/0:17,0:17:51.17:0,51,920	0/0:9,0:8:18.06:0,18,295	0/0:5,0:5:9.03:0,9,141	0/0:16,0:16:21.06:0,21,321	0/0:11,0:11:9.02:0,9,132	0/0:13,0:13:35.50:0,36,557	0/0:25,0:25:72.25:0,72,1350	1/1:10,0:10:26.53:335,27,0	1/1:2,24:26:74.32:733,74,0	0/0:21,0:21:31.68:0,32,732	./.
chr10	84822480	.	CTGAGGGGACCTCGGATTCAGGAGCAGCCTGAGG	C	3705.72	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=6.331;DP=690;FS=2.284;HRun=0;HaplotypeScore=509.9348;InbreedingCoeff=0.7144;MQ=56.33;MQ0=5;MQRankSum=-7.151;QD=10.02;ReadPosRankSum=2.690;VQSLOD=0.3564;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:35:35.99:679,36,0	1/1:11,0:11:4.22:68,4,0	0/0:14,0:11:3.01:0,3,56	0/0:15,0:11:6.48:0,6,59	0/0:22,0:22:27.06:0,27,718	1/1:22,0:20:12.02:211,12,0	1/1:47,0:45:35.87:485,36,0	0/1:28,0:27:17.98:18,0,20	0/0:18,0:18:27.05:0,27,898	1/1:35,0:34:26.81:452,27,0	1/1:14,5:19:3.01:54,3,0	0/0:33,0:33:51.15:0,51,1950	0/0:16,0:16:15.02:0,15,550	0/1:35,0:35:15.94:16,0,1833	0/1:15,0:15:1.92:2,0,474	1/1:21,0:20:26.89:294,27,0	1/1:21,0:21:11.94:101,12,0	0/0:27,0:27:66.21:0,66,2776	0/0:16,0:16:15.05:0,15,677	0/0:18,0:18:20.64:0,21,643	0/0:51,0:51:99:0,108,3883	0/0:22,0:22:18.06:0,18,613	0/0:25,0:25:33.02:0,33,1017	0/0:30,0:30:46.37:0,46,2056	1/1:28,0:27:27.01:456,27,0	1/1:26,11:36:33.01:708,33,0	0/0:13,0:13:24.05:0,24,861	1/1:15,0:15:15:161,15,0
chr10	84822544	.	AGGT	A	191.87	PASS	AB=0.826;AC=4;AF=0.071;AN=56;BaseQRankSum=4.377;DP=628;FS=7.051;HRun=0;HaplotypeScore=123.5673;InbreedingCoeff=0.2833;MQ=56.04;MQ0=4;MQRankSum=-4.320;QD=4.17;ReadPosRankSum=-2.794;VQSLOD=0.6016;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:87.25:0,87,1961	0/0:7,0:7:15:0,15,238	0/0:10,0:7:21.07:0,21,470	0/0:25,0:21:52.97:0,53,1073	0/0:16,0:16:48.16:0,48,1134	0/0:17,0:13:15.05:0,15,354	0/0:40,0:37:99:0,105,2422	0/0:32,0:28:84.29:0,84,1963	0/0:24,0:24:72.25:0,72,1679	0/0:23,1:22:4.97:0,5,1190	1/1:7,1:7:3.01:51,3,0	0/0:25,0:25:75.25:0,75,1686	0/0:14,0:14:36.12:0,36,851	0/0:34,0:34:96.32:0,96,2220	0/0:20,0:20:39.08:0,39,826	0/1:16,4:18:99:172,0,420	0/1:14,4:18:71.14:71,0,669	0/0:34,0:34:99:0,102,2400	0/0:10,0:9:27.09:0,27,639	0/0:8,0:8:24.08:0,24,567	0/0:59,0:58:99:0,169,3900	0/0:18,0:18:36.12:0,36,828	0/0:13,0:13:35.98:0,36,796	0/0:36,0:36:99:0,102,2296	0/0:22,0:19:27.09:0,27,627	0/0:34,0:31:69.24:0,69,1500	0/0:10,0:9:27.09:0,27,633	0/0:16,0:16:30.10:0,30,673
chr10	84822577	.	AGGT	A	854.19	PASS	AB=0.740;AC=4;AF=0.071;AN=56;BaseQRankSum=7.326;DP=729;FS=3.956;HRun=0;HaplotypeScore=142.0408;InbreedingCoeff=-0.0826;MQ=57.65;MQ0=16;MQRankSum=-6.568;QD=12.03;ReadPosRankSum=0.284;VQSLOD=3.1249;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:46:96.06:0,96,2373	0/1:4,2:5:93.55:94,0,129	0/0:14,0:13:34.93:0,35,721	0/0:21,0:12:27.51:0,28,506	0/0:22,0:22:63.22:0,63,1480	0/0:32,0:26:33.18:0,33,1052	0/0:64,0:59:99:0,159,3501	0/0:27,0:25:75.25:0,75,1699	0/0:25,0:25:72.19:0,72,1655	0/1:20,5:19:99:163,0,803	0/0:12,0:10:6.02:0,6,125	0/0:27,0:27:81.25:0,81,1753	0/0:18,0:18:51.13:0,51,1112	0/0:32,0:32:93.31:0,93,2149	0/0:24,0:24:54.19:0,54,1266	0/1:9,9:14:99:388,0,150	0/1:13,9:21:99:319,0,316	0/0:30,0:29:87.28:0,87,1984	0/0:13,0:13:39.13:0,39,862	0/0:7,0:7:12.04:0,12,283	0/0:75,0:72:99:0,205,4610	0/0:13,0:13:24.08:0,24,567	0/0:13,0:12:33.08:0,33,780	0/0:34,0:33:96.33:0,96,2248	0/0:27,0:22:30.10:0,30,674	0/0:53,0:43:99:0,117,2500	0/0:8,0:7:21.07:0,21,459	0/0:18,0:18:45.15:0,45,941
chr10	84822803	.	ACCTGAGCTGGGGGGACCTCGGGCTCAGCATCAG	A	728.61	PASS	AB=0.946;AC=9;AF=0.180;AN=50;BaseQRankSum=8.657;DP=625;FS=0.640;HRun=0;HaplotypeScore=444.3079;InbreedingCoeff=0.1357;MQ=55.47;MQ0=25;MQRankSum=-3.314;QD=5.17;ReadPosRankSum=-0.201;VQSLOD=0.4658;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:52:99:0,110,2958	0/1:9,0:7:81.34:81,0,243	0/0:13,0:7:20.98:0,21,362	0/0:18,0:11:15.61:0,16,311	0/0:15,0:15:33.11:0,33,841	0/0:22,0:19:36.12:0,36,896	0/0:51,0:45:99:0,112,3070	./.	0/0:27,0:27:69.24:0,69,2168	0/1:31,18:41:99:322,0,1333	0/1:16,0:14:34.60:35,0,452	0/0:26,0:26:69.24:0,69,2286	0/0:21,0:21:60.19:0,60,1821	0/0:33,0:33:90.17:0,90,2898	0/0:11,0:11:27.09:0,27,809	0/1:25,0:19:99:117,0,689	0/1:34,0:31:99:277,0,991	0/0:20,0:18:51.17:0,51,1622	./.	./.	0/0:24,0:17:16.16:0,16,123	1/1:5,0:2:2.97:20,3,0	0/0:10,0:9:24.08:0,24,602	0/0:41,0:40:99:0,117,3937	0/0:31,0:31:72.18:0,72,1697	0/0:38,0:30:55.39:0,55,1983	1/1:3,0:1:0.89:2,1,0	0/0:16,0:13:33.11:0,33,899
chr10	84823002	.	GAGC	G	133.15	PASS	AB=0.926;AC=3;AF=0.060;AN=50;BaseQRankSum=1.822;DP=947;FS=7.904;HRun=0;HaplotypeScore=182.3335;InbreedingCoeff=0.3668;MQ=33.86;MQ0=205;MQRankSum=-2.899;QD=3.41;ReadPosRankSum=-1.048;VQSLOD=1.9101;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:68,0:41:45.15:0,45,897	0/0:14,0:5:5.83:0,6,84	./.	./.	0/0:19,0:11:9.03:0,9,207	0/0:19,0:12:12.04:0,12,276	0/0:91,0:52:81.25:0,81,1697	0/0:21,0:1:3.01:0,3,69	0/0:41,0:30:71.27:0,71,1546	0/0:19,0:7:18.06:0,18,355	0/0:9,0:5:0.47:0,0,1	0/0:59,0:46:99:0,108,2298	0/0:34,0:28:75.25:0,75,1557	0/0:71,0:63:99:0,156,3231	0/0:27,0:23:51.17:0,51,1042	1/1:10,4:7:9.03:153,9,0	0/1:23,2:18:75.16:75,0,374	0/0:40,0:31:84.12:0,84,1666	0/0:31,0:4:5.98:0,6,68	0/0:15,0:5:9.03:0,9,207	0/0:169,0:106:99:0,152,2882	./.	0/0:9,0:5:6.02:0,6,119	0/0:63,0:52:99:0,120,2480	0/0:14,0:11:12.04:0,12,259	0/0:33,0:14:36.12:0,36,818	0/0:18,0:14:42.14:0,42,783	0/0:3,0:2:3.01:0,3,69
chr10	84823428	.	G	GAGC	604.74	PASS	AB=0.954;AC=7;AF=0.152;AN=46;BaseQRankSum=8.033;DP=557;FS=27.626;HRun=0;HaplotypeScore=113.0160;InbreedingCoeff=-0.1780;MQ=55.71;MQ0=12;MQRankSum=-7.001;QD=3.12;ReadPosRankSum=-3.260;VQSLOD=-0.1751;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:6:9.03:0,9,154	0/0:5,0:5:15.05:0,15,247	0/1:7,0:4:0.01:0,0,47	0/0:16,0:15:27.56:0,28,439	./.	0/0:41,0:41:99:0,108,1827	0/0:16,0:15:42.03:0,42,571	0/0:36,1:34:48.49:0,48,1373	0/0:16,0:12:30.10:0,30,507	0/0:11,0:10:18.95:0,19,307	0/1:41,0:41:33.42:33,0,1566	0/1:26,0:24:99:144,0,806	0/1:28,0:28:99:131,0,809	0/0:24,1:22:54.18:0,54,914	0/1:11,6:17:39.06:162,0,39	0/1:39,0:32:99:225,0,765	0/0:26,1:27:78.27:0,78,1322	0/0:19,0:17:11.02:0,11,721	0/0:10,0:10:21.07:0,21,339	0/0:104,2:90:99:0,235,3913	0/0:8,0:8:18.06:0,18,307	0/0:3,0:3:6.02:0,6,84	0/1:32,0:30:27.04:27,0,1150	./.	./.	0/0:10,0:10:30.10:0,30,512	./.
chr10	84823845	.	TTTA	T	3624.22	PASS	AB=0.564;AC=9;AF=0.161;AN=56;BaseQRankSum=7.036;DP=602;FS=5.697;HRun=0;HaplotypeScore=93.5008;InbreedingCoeff=0.8664;MQ=75.88;MQ0=0;MQRankSum=-2.814;QD=35.53;ReadPosRankSum=1.886;VQSLOD=4.4274;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,39:40:81.27:1270,81,0	0/0:10,0:9:24.08:0,24,536	0/0:21,0:21:57.20:0,57,1191	0/0:17,0:17:48.16:0,48,1000	0/0:30,0:30:84:0,84,1795	1/1:0,16:16:42.14:686,42,0	0/0:25,0:25:66.21:0,66,1432	0/0:27,0:27:78.27:0,78,1718	0/0:26,0:26:72.25:0,72,1609	0/0:28,0:28:75.26:0,75,1646	0/0:17,0:16:33.07:0,33,664	0/0:26,0:26:72.25:0,72,1564	0/0:18,0:18:54.19:0,54,1188	0/0:26,0:26:72.25:0,72,1599	0/0:19,0:19:54.18:0,54,1167	0/0:19,0:19:54.19:0,54,1207	0/0:34,0:34:99:0,99,2192	0/0:14,0:14:42.14:0,42,910	0/0:32,0:31:81.28:0,81,1758	0/0:12,0:11:33.11:0,33,705	0/0:23,0:23:69.24:0,69,1485	0/0:18,0:18:39.13:0,39,814	0/0:15,0:15:42.14:0,42,921	0/0:20,0:20:57.15:0,57,1225	1/1:0,8:8:24.08:392,24,0	0/1:5,17:21:99:639,0,130	0/0:23,0:23:63.22:0,63,1406	1/1:0,15:15:39.13:637,39,0
chr10	84824091	.	C	CCAAA	2113.49	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.518;DP=530;FS=0.594;HRun=0;HaplotypeScore=128.9439;InbreedingCoeff=0.9579;MQ=70.59;MQ0=10;MQRankSum=-6.070;QD=28.95;ReadPosRankSum=0.638;VQSLOD=3.7117;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:30.06:0,30,484	1/1:7,0:7:11.99:183,12,0	0/0:67,0:27:46.26:0,46,528	0/0:47,0:19:24.49:0,24,286	0/0:32,0:32:77.86:0,78,1179	0/0:14,0:14:39.07:0,39,604	0/0:17,0:17:41.67:0,42,514	0/0:12,0:12:21.06:0,21,331	0/0:19,0:19:39.11:0,39,622	1/1:18,2:19:39.06:747,39,0	1/1:13,2:14:5.54:491,6,0	0/0:8,0:8:15.05:0,15,260	0/0:15,0:15:36.05:0,36,534	0/0:12,0:12:33.08:0,33,513	0/0:18,0:18:42.13:0,42,700	1/1:12,1:13:27.06:454,27,0	1/1:18,0:18:25.81:407,26,0	0/0:20,0:20:51.17:0,51,859	0/0:12,0:12:32.92:0,33,466	0/0:14,0:13:30.06:0,30,485	0/0:13,0:13:21.04:0,21,313	0/0:17,0:17:42.12:0,42,626	0/0:17,0:17:42.14:0,42,735	0/0:22,0:22:51.63:0,52,864	0/0:14,0:14:30.09:0,30,473	0/0:14,0:13:30.05:0,30,451	0/0:13,0:13:26.94:0,27,343	0/0:21,0:21:51.15:0,51,801
chr10	84824099	.	AC	A	564.03	PASS	AB=0.883;AC=7;AF=0.125;AN=56;BaseQRankSum=8.073;DP=540;FS=12.924;HRun=2;HaplotypeScore=106.5008;InbreedingCoeff=0.3559;MQ=62.92;MQ0=14;MQRankSum=-4.662;QD=6.56;ReadPosRankSum=-2.200;VQSLOD=-0.7307;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,1:18:32.29:0,32,282	1/1:6,1:6:11.86:88,12,0	0/0:63,1:22:48.12:0,48,386	0/0:47,0:15:30.03:0,30,222	0/0:32,0:33:79.32:0,79,944	0/0:17,0:17:19.95:0,20,350	0/0:17,0:17:44.94:0,45,408	0/0:12,0:12:26.92:0,27,237	0/0:14,0:15:41.89:0,42,518	0/1:21,2:23:43.75:170,0,44	0/1:18,1:19:51.62:119,0,52	0/0:8,0:8:17.83:0,18,158	0/0:15,0:15:40.45:0,40,425	0/0:11,0:11:33:0,33,307	0/0:17,0:17:35.90:0,36,382	0/1:14,3:17:12.30:156,0,12	1/1:16,2:17:1.27:158,1,0	0/0:22,0:21:57.49:0,57,666	0/0:14,0:12:32.86:0,33,292	0/0:16,0:15:31.33:0,31,280	0/0:11,0:11:24.83:0,25,215	0/0:18,0:18:44.72:0,45,411	0/0:15,0:15:39.02:0,39,488	0/0:19,0:19:52.99:0,53,626	0/0:13,0:13:2.17:0,2,278	0/0:14,0:12:17.12:0,17,305	0/0:15,0:15:7.40:0,7,241	0/0:21,0:21:48.61:0,49,481
chr10	84824115	.	AC	A	3988.43	PASS	AB=0.967;AC=34;AF=0.607;AN=56;BaseQRankSum=10.771;DP=603;FS=9.437;HRun=1;HaplotypeScore=112.2716;InbreedingCoeff=0.7685;MQ=51.28;MQ0=13;MQRankSum=-7.713;QD=9.66;ReadPosRankSum=-3.383;VQSLOD=-0.2811;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,1:34:80.04:492,80,0	1/1:6,1:6:5.57:34,6,0	0/1:43,2:12:9.89:10,0,54	0/1:38,1:12:5.41:5,0,26	0/0:35,1:36:94.74:0,95,834	1/1:23,1:24:42.65:274,43,0	0/0:17,0:17:33.46:0,33,188	1/1:25,0:22:42.09:295,42,0	0/0:20,0:19:47.97:0,48,356	1/1:28,1:27:0.79:148,1,0	1/1:21,2:21:17.46:186,17,0	0/0:10,0:10:22.82:0,23,174	0/0:12,0:12:25.95:0,26,212	0/0:8,0:8:1.98:0,2,131	0/0:18,1:19:24.35:0,24,379	1/1:8,3:11:5:103,5,0	1/1:19,0:18:34.91:209,35,0	0/0:28,1:28:47.50:0,48,593	1/1:10,0:8:20.33:142,20,0	1/1:16,5:20:49.59:362,50,0	1/1:7,0:6:8.85:56,9,0	1/1:21,0:21:44.78:311,45,0	0/0:18,0:18:43.35:0,43,375	0/0:21,0:20:43.47:0,43,473	1/1:15,0:14:32.16:227,32,0	1/1:30,0:26:65.30:432,65,0	1/1:27,0:25:60.51:346,61,0	1/1:23,1:24:53.70:357,54,0
chr10	84824122	.	AC	A	3052.08	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=11.245;DP=576;FS=3.189;HRun=1;HaplotypeScore=113.3088;InbreedingCoeff=0.9083;MQ=49.61;MQ0=11;MQRankSum=-6.875;QD=9.39;ReadPosRankSum=-3.112;VQSLOD=0.2014;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,1:34:75.73:473,76,0	1/1:7,0:6:2.95:20,3,0	0/0:20,1:7:7.69:0,8,57	0/0:30,4:9:4.77:0,5,30	0/0:37,0:37:99:0,111,1274	1/1:19,1:20:29.07:193,29,0	0/0:16,0:16:36.12:0,36,461	1/1:26,0:23:38.95:221,39,0	0/0:21,0:20:48.89:0,49,590	1/1:26,1:25:17.99:167,18,0	1/1:21,1:22:35.32:254,35,0	0/0:9,0:9:21.07:0,21,277	0/0:14,0:14:37.97:0,38,403	0/0:8,0:8:23.54:0,24,255	0/0:19,0:19:50.90:0,51,650	1/1:12,0:12:6.68:123,7,0	1/1:17,1:18:8.80:115,9,0	0/0:29,0:28:68.83:0,69,902	1/1:13,0:11:15.36:78,15,0	1/1:20,2:21:45.13:245,45,0	1/1:10,0:9:6.60:29,7,0	1/1:22,0:22:41.07:230,41,0	0/0:17,0:17:45.12:0,45,557	0/0:24,0:23:68.07:0,68,741	1/1:16,0:15:30.89:244,31,0	1/1:30,0:26:56.81:389,57,0	1/1:27,0:25:27.99:208,28,0	1/1:17,0:17:39.80:285,40,0
chr10	84824123	.	CA	C	1233.99	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=2.251;DP=581;FS=5.502;HRun=6;HaplotypeScore=120.7211;InbreedingCoeff=0.6794;MQ=49.97;MQ0=11;MQRankSum=-0.214;QD=7.52;ReadPosRankSum=-3.082;VQSLOD=0.0936;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:30.75:0,31,245	0/0:7,0:6:2.92:0,3,17	0/0:23,0:8:11.66:0,12,93	0/1:34,0:10:0.21:0,0,35	0/0:38,0:38:93.29:0,93,1206	0/0:21,0:21:30.70:0,31,179	0/0:16,0:16:36.09:0,36,444	1/1:26,0:23:16.89:157,17,0	0/0:21,0:20:51.15:0,51,652	0/0:29,0:27:32.49:0,32,158	0/0:24,0:22:16.11:0,16,154	0/0:9,0:9:21.07:0,21,271	0/0:13,0:13:39.12:0,39,496	0/0:9,0:9:24.06:0,24,295	0/0:19,0:19:54.11:0,54,674	0/0:11,0:12:3.05:0,3,85	0/1:19,0:19:2.57:3,0,59	0/0:29,0:28:79.39:0,79,970	1/1:12,2:12:30.01:304,30,0	1/1:15,7:21:25.98:275,26,0	0/0:5,5:9:0:0,0,0	1/1:19,3:22:16.12:249,16,0	0/0:17,0:17:42.14:0,42,551	0/0:23,0:22:63.12:0,63,800	0/0:16,0:15:14.10:0,14,89	0/0:30,0:26:23.86:0,24,191	1/1:23,4:25:2.23:405,2,0	0/0:17,0:17:0.24:0,0,53
chr10	84824124	.	A	AC	387.45	PASS	AB=0.890;AC=6;AF=0.107;AN=56;BaseQRankSum=2.244;DP=580;FS=8.088;HRun=1;HaplotypeScore=127.5151;InbreedingCoeff=0.1912;MQ=49.04;MQ0=11;MQRankSum=0.134;QD=3.52;ReadPosRankSum=-1.863;VQSLOD=-0.7451;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:88.80:0,89,675	0/0:7,0:6:5.83:0,6,37	0/0:23,0:8:5.69:0,6,98	0/0:33,0:10:10.43:0,10,65	0/0:36,0:36:99:0,105,1355	0/0:21,0:21:45.65:0,46,297	0/0:16,0:16:36.12:0,36,495	0/1:17,6:22:14.67:15,0,109	0/0:21,0:20:57.16:0,57,757	0/0:30,0:28:33.52:0,34,222	0/0:24,0:22:22.73:0,23,238	0/0:9,0:9:21.07:0,21,293	0/0:13,0:13:39.10:0,39,513	0/0:9,0:9:26.81:0,27,325	0/0:19,0:19:54.18:0,54,753	0/0:12,0:12:18.12:0,18,130	0/0:20,0:20:17.99:0,18,137	0/0:29,0:28:81.20:0,81,1081	1/1:15,0:13:18.37:117,18,0	0/1:23,0:22:82.61:83,0,87	0/0:10,0:9:2.96:0,3,19	0/1:17,2:20:48.69:91,0,49	0/0:17,0:17:45.14:0,45,608	0/0:24,0:23:66.17:0,66,866	0/0:16,0:15:41.59:0,42,298	0/0:30,0:26:72.29:0,72,533	0/1:25,2:25:53.51:210,0,54	0/0:17,0:17:43:0,43,280
chr10	84824137	.	CAAAAAA	C	424.30	PASS	AB=0.941;AC=6;AF=0.107;AN=56;BaseQRankSum=3.006;DP=534;FS=4.838;HRun=6;HaplotypeScore=155.8771;InbreedingCoeff=-0.0450;MQ=55.77;MQ0=4;MQRankSum=2.165;QD=4.37;ReadPosRankSum=-1.989;VQSLOD=-0.4016;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:78.06:0,78,1488	0/1:9,0:8:6.10:66,0,6	0/0:11,0:9:26.71:0,27,309	0/1:18,0:10:0.63:1,0,276	0/0:36,0:36:99:0,108,2738	0/0:20,0:20:45.01:0,45,736	0/0:17,0:17:39.04:0,39,823	0/0:21,0:18:43.86:0,44,507	0/0:22,0:21:63.19:0,63,1458	0/1:10,12:21:99:243,0,228	0/1:20,0:17:97.60:98,0,356	0/0:10,0:10:30.10:0,30,715	0/0:14,0:14:34.08:0,34,1066	0/0:11,0:11:33.07:0,33,520	0/0:24,0:24:69.12:0,69,1814	0/1:12,0:12:87.49:87,0,339	0/1:16,0:16:47.10:47,0,204	0/0:29,0:28:81.22:0,81,2322	0/0:17,0:16:47.32:0,47,608	0/0:23,0:22:58.01:0,58,791	0/0:9,0:9:5.93:0,6,56	0/0:17,0:18:43.84:0,44,522	0/0:16,0:16:45.13:0,45,1016	0/0:24,0:23:67.41:0,67,1561	0/0:19,0:18:50.33:0,50,737	0/0:26,0:23:68.17:0,68,912	0/0:27,0:25:71.72:0,72,1258	0/0:9,0:9:17.53:0,18,344
chr10	84824143	.	A	AC	695.69	PASS	AB=0.858;AC=6;AF=0.107;AN=56;BaseQRankSum=4.453;DP=535;FS=23.133;HRun=1;HaplotypeScore=104.5029;InbreedingCoeff=0.1930;MQ=61.05;MQ0=2;MQRankSum=0.897;QD=8.28;ReadPosRankSum=-0.314;VQSLOD=-0.4033;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:74.89:0,75,802	1/1:8,0:7:9:78,9,0	0/0:16,0:13:32.72:0,33,337	0/0:13,0:10:2.55:0,3,242	0/0:38,0:38:99:0,111,1350	0/0:19,0:19:38.87:0,39,395	0/0:16,0:16:36.03:0,36,397	0/0:18,0:15:39.86:0,40,432	0/0:23,0:22:65.96:0,66,702	0/1:21,0:21:25.64:283,0,26	0/1:23,0:22:20.62:246,0,21	0/0:12,0:12:36.10:0,36,440	0/0:15,0:15:41.97:0,42,474	0/0:12,0:12:32.87:0,33,372	0/0:26,0:26:75.11:0,75,889	0/1:12,0:13:19.72:152,0,20	0/1:5,11:17:46.60:61,0,47	0/0:29,0:28:80.91:0,81,917	0/0:19,0:18:48.14:0,48,597	0/0:20,0:19:47.91:0,48,569	0/0:10,0:10:8.93:0,9,80	0/0:17,0:17:39.05:0,39,451	0/0:16,0:16:45.07:0,45,522	0/0:25,0:24:60.88:0,61,718	0/0:19,0:18:50.89:0,51,538	0/0:20,0:17:45.01:0,45,520	0/0:28,0:26:70:0,70,799	0/0:9,0:9:26.71:0,27,220
chr10	84824285	.	ATGAG	A	14952.84	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=16.488;DP=650;FS=2.174;HRun=0;HaplotypeScore=111.0663;InbreedingCoeff=0.9939;MQ=82.41;MQ0=0;MQRankSum=-4.946;QD=40.09;ReadPosRankSum=2.391;VQSLOD=4.8328;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,39:45:90.26:1584,90,0	1/1:0,5:5:11.66:218,12,0	0/0:23,0:23:57.13:0,57,1190	0/0:16,0:16:33.01:0,33,727	0/0:28,0:28:78.25:0,78,1913	1/1:2,31:33:78.27:1372,78,0	0/0:31,0:31:87.28:0,87,2195	1/1:2,34:36:99:1571,102,0	0/0:28,0:28:81.26:0,81,2009	1/1:3,23:26:63.20:1065,63,0	1/1:4,15:19:39.13:618,39,0	0/0:19,0:19:57.20:0,57,1446	0/0:17,0:17:51.18:0,51,1327	0/0:19,0:19:51.16:0,51,1183	0/0:26,0:26:75.24:0,75,1882	1/1:0,18:18:39.13:708,39,0	1/1:2,23:25:57.20:1034,57,0	0/0:18,0:18:48.16:0,48,1256	1/1:3,18:21:54.16:897,54,0	1/1:1,30:31:84.20:1437,84,0	1/1:5,25:30:48.16:835,48,0	1/1:0,23:23:54.06:893,54,0	0/0:20,0:20:54.18:0,54,1372	0/0:32,0:32:96.33:0,96,2404	1/1:1,12:13:24.08:436,24,0	1/1:0,24:24:69.21:1196,69,0	1/1:0,16:16:42.14:762,42,0	1/1:0,8:8:18.06:327,18,0
chr10	84824464	.	C	CAT	5924.47	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-12.765;DP=793;FS=2.201;HRun=0;HaplotypeScore=104.6847;InbreedingCoeff=0.9863;MQ=86.71;MQ0=2;MQRankSum=-3.090;QD=45.57;ReadPosRankSum=1.946;VQSLOD=6.3467;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,1727	1/1:1,4:5:9.03:162,9,0	0/0:24,0:24:61.39:0,61,806	0/0:34,0:33:87.23:0,87,1181	0/0:41,0:41:99:0,120,1664	0/0:31,0:31:87.29:0,87,1277	0/0:31,0:31:93.29:0,93,1328	0/0:31,0:31:90.26:0,90,1238	0/0:38,0:38:99:0,114,1658	1/1:0,31:31:93.22:1667,93,0	1/1:1,27:28:54.19:1007,54,0	0/0:20,0:20:60.20:0,60,883	0/0:24,0:24:72.20:0,72,999	0/0:22,0:22:63.20:0,63,905	0/0:44,0:44:99:0,132,1902	1/1:0,38:37:99:1909,102,0	1/1:2,25:26:63.22:1179,63,0	0/0:14,0:14:39:0,39,500	0/0:21,0:21:60.17:0,60,841	0/0:31,0:30:87.26:0,87,1238	0/0:46,0:46:99:0,132,1855	0/0:19,0:19:54.18:0,54,793	0/0:15,0:15:42.14:0,42,618	0/0:43,0:43:99:0,123,1678	0/0:20,0:20:57.18:0,57,819	0/0:30,0:30:90.29:0,90,1289	0/0:29,0:29:87.29:0,87,1279	0/0:11,0:11:33.11:0,33,485
chr10	84824895	.	TC	T	3861.32	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.185;DP=639;FS=3.448;HRun=3;HaplotypeScore=64.9108;InbreedingCoeff=0.9988;MQ=91.23;MQ0=0;MQRankSum=-2.685;QD=32.72;ReadPosRankSum=2.725;VQSLOD=4.2899;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:66.21:818,66,0	0/0:9,0:9:27.09:0,27,389	0/0:31,0:31:84.21:0,84,1151	0/0:24,0:24:61.06:0,61,887	0/0:30,0:30:87.28:0,87,1234	1/1:1,19:20:51.16:632,51,0	0/0:29,0:29:87.28:0,87,1232	0/0:29,0:29:84.27:0,84,1175	0/0:15,0:15:45.15:0,45,648	0/0:20,0:20:60.17:0,60,813	0/0:20,0:20:57.18:0,57,804	0/0:23,0:23:69.23:0,69,993	0/0:24,0:24:72.21:0,72,1000	0/0:27,0:27:75.25:0,75,1080	0/0:28,0:28:81.27:0,81,1167	0/0:14,0:14:39.12:0,39,543	0/0:24,0:24:69.22:0,69,975	0/0:8,0:8:21.07:0,21,300	0/0:22,0:22:63.20:0,63,888	0/0:22,0:22:66.21:0,66,922	0/0:28,0:28:84.26:0,84,1173	0/0:22,0:22:66.21:0,66,931	0/0:17,0:17:45.15:0,45,644	0/0:26,0:26:75.05:0,75,1062	1/1:1,20:21:60.19:744,60,0	1/1:2,29:31:47.07:1035,47,0	0/0:29,0:29:84.26:0,84,1186	1/1:2,19:21:51.16:632,51,0
chr10	84825145	.	CTA	C	3437.43	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.387;DP=653;FS=5.251;HRun=0;HaplotypeScore=88.0332;InbreedingCoeff=0.9994;MQ=82.77;MQ0=0;MQRankSum=-0.906;QD=34.37;ReadPosRankSum=1.069;VQSLOD=6.0754;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,117,1977	1/1:0,13:13:36.12:473,36,0	0/0:24,0:24:51.15:0,51,843	0/0:15,0:15:36.10:0,36,569	0/0:33,0:33:90.31:0,90,1528	0/0:19,0:19:48.16:0,48,823	0/0:26,0:26:72.25:0,72,1227	0/0:29,0:29:69.16:0,69,720	0/0:24,0:24:69.24:0,69,1175	1/1:2,23:25:69.18:874,69,0	1/1:2,19:21:51.17:670,51,0	0/0:35,0:35:93.32:0,93,1594	0/0:19,0:19:54.18:0,54,922	0/0:17,0:17:51.17:0,51,870	0/0:30,0:30:81.28:0,81,1386	1/1:2,21:23:63.20:828,63,0	1/1:3,15:18:45.15:592,45,0	0/0:19,0:19:54.18:0,54,896	0/0:24,0:24:63.08:0,63,641	0/0:27,0:27:81.22:0,81,900	0/0:22,0:22:54.12:0,54,597	0/0:19,0:19:47.98:0,48,517	0/0:14,0:14:39.13:0,39,669	0/0:22,0:22:66.23:0,66,1118	0/0:27,0:27:72.25:0,72,1230	0/0:35,1:36:59.89:0,60,1604	0/0:17,0:17:48.14:0,48,542	0/0:12,0:12:24.08:0,24,411
chr10	84825793	.	GC	G	3944.21	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.195;DP=791;FS=4.166;HRun=1;HaplotypeScore=74.8453;InbreedingCoeff=0.9981;MQ=97.55;MQ0=0;MQRankSum=-5.393;QD=36.86;ReadPosRankSum=1.949;VQSLOD=4.1648;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1939	1/1:0,9:9:18.06:252,18,0	0/0:53,1:54:99:0,139,2191	0/0:26,0:26:77.72:0,78,1154	0/0:29,0:29:87.28:0,87,1367	0/0:11,0:11:33.04:0,33,497	0/0:22,0:22:66.21:0,66,1030	0/0:37,0:37:99:0,111,1712	0/0:35,0:35:99:0,105,1651	1/1:0,31:31:93.27:1260,93,0	1/1:0,19:19:48.16:671,48,0	0/0:24,0:24:72.22:0,72,1125	0/0:27,0:27:81.22:0,81,1243	0/0:23,0:23:66.16:0,66,1016	0/0:44,0:43:99:0,132,2081	1/1:0,30:30:78.26:1090,78,0	1/1:0,18:18:48.16:671,48,0	0/0:24,0:24:72.21:0,72,1101	0/0:18,0:18:54.15:0,54,836	0/0:36,0:36:99:0,105,1672	0/0:56,0:56:99:0,165,2561	0/0:27,0:27:69.24:0,69,1098	0/0:19,0:19:57.19:0,57,906	0/0:35,0:35:99:0,105,1626	0/0:23,0:23:69.22:0,69,1079	0/0:32,0:32:96.31:0,96,1491	0/0:19,0:19:57.19:0,57,911	0/0:22,0:22:66.22:0,66,1046
chr10	84826163	.	AGAGAGGGGGC	A	7737.16	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.181;DP=550;FS=0.867;HRun=0;HaplotypeScore=181.2373;InbreedingCoeff=0.9999;MQ=90.55;MQ0=0;MQRankSum=-12.841;QD=74.40;ReadPosRankSum=-0.712;VQSLOD=4.5770;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,6299	0/0:14,0:14:42.12:0,42,1998	0/0:24,0:24:72.08:0,72,3269	0/0:24,0:24:69.24:0,69,3222	0/0:16,0:16:45.15:0,45,2211	0/0:13,0:13:39.12:0,39,1898	0/0:22,0:22:66.21:0,66,3136	1/1:0,13:13:39.13:1224,39,0	0/0:23,0:23:69.21:0,69,3255	0/0:20,0:20:60.21:0,60,3227	0/0:13,0:13:36.12:0,36,1848	0/0:16,0:16:48.16:0,48,2638	0/0:16,0:16:48.16:0,48,2505	0/0:27,0:27:81.26:0,81,4047	0/0:17,0:17:51.18:0,51,2691	0/0:26,0:26:78.25:0,78,4047	0/0:28,0:28:84.29:0,84,4448	0/0:18,0:18:54.19:0,54,2864	1/1:3,9:12:36.12:1036,36,0	1/1:3,18:21:63.20:1701,63,0	1/1:6,14:20:44.99:1090,45,0	1/1:0,20:20:38.84:1154,39,0	0/0:17,0:17:48.16:0,48,2259	0/0:19,0:19:57.20:0,57,2902	0/0:17,0:16:51.18:0,51,2652	0/0:19,0:19:57.20:0,57,3043	1/1:2,16:18:54.17:1532,54,0	0/0:14,0:14:42.14:0,42,2303
chr10	84826175	.	AC	A	2237.47	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.554;DP=573;FS=5.218;HRun=3;HaplotypeScore=99.0658;InbreedingCoeff=0.9999;MQ=92.64;MQ0=0;MQRankSum=-12.931;QD=22.15;ReadPosRankSum=0.008;VQSLOD=2.7864;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1822	0/0:14,0:14:42.14:0,42,604	0/0:25,0:25:69.18:0,69,940	0/0:28,0:28:46.14:0,46,936	0/0:18,0:18:51.16:0,51,716	0/0:14,0:14:39.13:0,39,562	0/0:21,0:21:63.21:0,63,907	1/1:0,15:15:45.03:407,45,0	0/0:21,0:21:63.21:0,63,906	0/0:21,0:21:57.18:0,57,806	0/0:16,0:16:39.12:0,39,542	0/0:16,0:16:48.15:0,48,674	0/0:18,0:18:48.15:0,48,670	0/0:28,0:28:81.27:0,81,1165	0/0:19,0:19:54.16:0,54,742	0/0:23,0:23:66.22:0,66,950	0/0:29,0:29:87.28:0,87,1234	0/0:20,0:20:57.19:0,57,821	1/1:0,13:13:39.03:375,39,0	1/1:0,21:21:54.01:507,54,0	1/1:0,16:16:36.02:346,36,0	1/1:1,17:18:38.95:358,39,0	0/0:16,0:16:48.15:0,48,673	0/0:20,0:20:57.19:0,57,821	0/0:21,0:21:60.19:0,60,846	0/0:25,0:25:72.21:0,72,1000	1/1:3,15:18:53.85:434,54,0	0/0:14,0:14:42.13:0,42,586
chr10	84826744	.	G	GT	4133.66	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-5.131;DP=626;FS=0.000;HRun=8;HaplotypeScore=69.1786;InbreedingCoeff=0.9996;MQ=80.62;MQ0=0;MQRankSum=0.115;QD=28.91;ReadPosRankSum=-0.644;VQSLOD=3.4585;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,126,1149	0/0:14,0:14:30.01:0,30,274	0/0:26,0:25:40.78:0,41,362	0/0:22,0:23:33.05:0,33,255	0/0:25,0:25:66.02:0,66,603	0/0:23,0:23:59.89:0,60,523	0/0:26,0:26:69.02:0,69,625	1/1:4,18:23:57.14:637,57,0	0/0:20,0:20:51.03:0,51,467	0/0:18,0:18:42.01:0,42,382	0/0:16,0:16:47.80:0,48,419	0/0:20,0:20:56.97:0,57,507	0/0:17,0:17:47.52:0,48,421	0/0:24,0:24:66:0,66,597	0/0:19,0:19:48:0,48,434	0/0:16,0:16:42.02:0,42,384	0/0:38,0:38:96.01:0,96,868	0/0:15,0:14:42:0,42,378	1/1:6,24:30:72.19:818,72,0	1/1:1,24:25:72.21:828,72,0	1/1:3,17:20:45.13:519,45,0	1/1:0,24:24:60.13:674,60,0	0/0:20,0:20:54.03:0,54,494	0/0:15,0:15:30:0,30,274	0/0:22,0:22:60.03:0,60,549	0/0:29,0:29:84.03:0,84,762	1/1:2,19:21:57.17:657,57,0	0/0:11,0:11:32.99:0,33,290
chr10	84827222	.	TTGCCTCCCCTGTC	T	7841.49	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.180;DP=686;FS=0.473;HRun=0;HaplotypeScore=258.7264;InbreedingCoeff=0.9999;MQ=83.59;MQ0=0;MQRankSum=-12.575;QD=98.02;ReadPosRankSum=1.708;VQSLOD=4.5843;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,6037	0/0:13,0:13:39.13:0,39,2383	0/0:20,0:20:57.20:0,57,3057	0/0:27,0:27:66.50:0,67,3050	0/0:25,0:25:72.25:0,72,4350	1/1:4,22:26:51.18:2046,51,0	0/0:24,0:24:72.25:0,72,4823	0/0:28,0:28:84.27:0,84,4912	0/0:24,0:24:72.23:0,72,4593	0/0:31,0:31:87.30:0,87,5347	0/0:22,0:22:63.22:0,63,3861	0/0:27,0:27:78.27:0,78,5005	0/0:24,0:24:72.25:0,72,4285	0/0:19,0:19:57.20:0,57,3637	0/0:34,0:34:99:0,102,6679	0/0:22,0:22:66.23:0,66,4339	0/0:21,0:21:63.22:0,63,4144	0/0:19,0:19:57.20:0,57,3701	0/0:21,0:21:63.22:0,63,3750	0/0:31,0:31:81.20:0,81,4715	0/0:40,0:40:99:0,117,6968	0/0:32,0:32:93.31:0,93,5670	0/0:20,0:20:48.16:0,48,3122	0/0:16,0:16:48.16:0,48,2875	1/1:1,18:19:48.16:1823,48,0	1/1:2,21:23:63.22:2500,63,0	0/0:32,0:32:93.30:0,93,5645	1/1:0,12:12:36.12:1473,36,0
chr10	84827476	.	AT	A	3188.85	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.238;DP=706;FS=2.454;HRun=2;HaplotypeScore=68.3045;InbreedingCoeff=0.9996;MQ=82.41;MQ0=0;MQRankSum=-1.080;QD=32.54;ReadPosRankSum=2.908;VQSLOD=3.6591;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.14:0,42,621	1/1:0,13:13:33.11:428,33,0	0/0:20,0:20:41.83:0,42,746	0/0:20,0:20:54.14:0,54,752	0/0:29,0:29:87.28:0,87,1283	0/0:30,0:30:84.23:0,84,1215	0/0:26,0:26:78.26:0,78,1151	0/0:32,0:32:96.29:0,96,1369	0/0:33,0:33:99:0,99,1483	1/1:0,23:23:69.22:894,69,0	1/1:1,27:28:66.13:835,66,0	0/0:22,0:22:66.21:0,66,969	0/0:22,0:22:66.22:0,66,989	0/0:27,0:27:81.24:0,81,1173	0/0:33,0:33:99:0,99,1466	1/1:0,9:9:27.09:351,27,0	1/1:1,24:25:66.21:857,66,0	0/0:13,0:13:33.11:0,33,490	0/0:29,0:29:84.26:0,84,1221	0/0:29,0:29:87.24:0,87,1259	0/0:18,0:18:54.18:0,54,809	0/0:32,0:32:93.30:0,93,1374	0/0:29,0:29:87.29:0,87,1301	0/0:23,0:23:69.22:0,69,1014	0/0:33,0:33:96.23:0,96,1363	0/0:28,1:29:48.33:0,48,1219	0/0:43,0:43:99:0,129,1932	0/0:21,0:20:63.15:0,63,916
chr10	84827641	.	CTA	C	3619.93	PASS	AB=0.524;AC=9;AF=0.161;AN=56;BaseQRankSum=10.552;DP=605;FS=6.075;HRun=0;HaplotypeScore=73.6475;InbreedingCoeff=0.9254;MQ=86.48;MQ0=0;MQRankSum=-1.713;QD=31.75;ReadPosRankSum=2.246;VQSLOD=5.4520;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.20:0,57,988	1/1:1,11:12:27.09:365,27,0	0/0:24,0:24:57.19:0,57,910	0/0:18,0:18:51.12:0,51,827	0/0:19,0:19:54.17:0,54,913	0/0:23,0:23:63.22:0,63,1092	0/0:18,0:18:51.14:0,51,820	0/0:34,0:34:81.28:0,81,1409	0/0:29,0:29:87.28:0,87,1480	1/1:1,32:33:99:1319,99,0	1/1:3,22:25:54.18:731,54,0	0/0:21,0:21:57.19:0,57,972	0/0:14,0:14:39.13:0,39,672	0/0:16,0:16:45.15:0,45,789	0/0:24,0:24:63.22:0,63,1104	1/1:3,19:22:45.15:607,45,0	0/1:2,20:22:1.43:598,0,1	0/0:14,0:14:36.12:0,36,616	0/0:17,0:17:48.16:0,48,826	0/0:22,0:22:57.20:0,57,1000	0/0:22,0:22:66.20:0,66,1127	0/0:21,0:21:54.17:0,54,918	0/0:19,0:19:54.17:0,54,918	0/0:21,0:21:57.20:0,57,999	0/0:26,0:26:60.19:0,60,1013	0/0:19,0:19:54.18:0,54,939	0/0:32,0:32:87.28:0,87,1469	0/0:16,0:16:48.16:0,48,823
chr10	84827750	.	A	ATAAAG	25641.03	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=9.557;DP=644;FS=10.805;HRun=0;HaplotypeScore=119.8279;InbreedingCoeff=0.9845;MQ=65.31;MQ0=0;MQRankSum=-16.482;QD=66.60;ReadPosRankSum=0.316;VQSLOD=5.9417;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:27.09:833,27,0	1/1:0,2:2:6.02:185,6,0	0/0:17,0:17:35.65:0,36,706	0/0:17,0:17:45.13:0,45,767	0/0:26,0:26:69.24:0,69,1405	1/1:3,16:20:42.14:1296,42,0	0/0:22,0:22:60.18:0,60,1128	1/1:5,29:38:99:2603,102,0	0/0:23,0:23:69.22:0,69,1322	1/1:10,14:26:54.18:1523,54,0	1/1:5,13:19:48.16:1298,48,0	0/0:24,0:24:60.20:0,60,1223	0/0:15,0:15:39.13:0,39,818	0/0:16,0:16:48.14:0,48,909	0/0:30,0:30:90.27:0,90,1732	1/1:2,32:35:90.31:2753,90,0	1/1:9,2:12:26.69:402,27,0	0/0:15,0:15:42.12:0,42,839	1/1:5,18:23:63.19:1778,63,0	1/1:1,40:41:96.27:2745,96,0	1/1:1,10:12:24.08:656,24,0	1/1:4,24:30:69.15:1968,69,0	0/0:35,0:35:99:0,102,2019	0/0:19,0:19:57.16:0,57,1084	1/1:1,24:29:60.20:1790,60,0	1/1:3,31:35:99:2905,102,0	1/1:5,29:34:72.25:2167,72,0	1/1:0,10:9:24.08:741,24,0
chr10	84827754	.	A	AG	2742.88	PASS	AB=0.974;AC=25;AF=0.446;AN=56;BaseQRankSum=20.174;DP=610;FS=9.026;HRun=0;HaplotypeScore=142.0496;InbreedingCoeff=0.5125;MQ=68.78;MQ0=0;MQRankSum=-18.240;QD=7.93;ReadPosRankSum=6.030;VQSLOD=2.9136;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:25.18:116,25,0	1/1:2,0:2:5.60:26,6,0	0/0:19,0:19:31.19:0,31,573	0/0:21,0:21:54.18:0,54,739	0/0:27,0:27:75.23:0,75,1028	1/1:17,0:17:39.17:180,39,0	0/0:21,0:21:63.21:0,63,879	0/1:34,0:34:99:156,0,222	0/0:24,0:24:72.21:0,72,970	0/1:21,0:21:99:169,0,100	1/1:16,1:17:33.61:221,34,0	0/0:21,0:21:63.20:0,63,866	0/0:14,0:14:42.14:0,42,587	0/0:16,0:16:48.16:0,48,671	0/0:31,0:31:93.29:0,93,1281	1/1:34,0:34:61.52:354,62,0	0/1:9,2:11:56.72:57,0,106	0/0:15,0:15:45.12:0,45,609	0/1:19,0:19:62.85:63,0,137	0/1:37,0:37:0.33:342,0,0	0/1:15,0:15:39.91:82,0,40	1/1:25,0:25:18.68:211,19,0	0/0:35,0:35:99:0,105,1448	0/0:20,0:20:60.19:0,60,821	1/1:26,0:26:54.41:247,54,0	0/1:35,1:36:68.48:342,0,68	1/1:27,0:27:43.13:279,43,0	1/1:10,0:9:22.38:103,22,0
chr10	84827845	.	C	CACAT	7105.44	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-12.056;DP=731;FS=2.413;HRun=0;HaplotypeScore=114.3893;InbreedingCoeff=0.9995;MQ=87.56;MQ0=0;MQRankSum=-3.037;QD=60.22;ReadPosRankSum=2.141;VQSLOD=6.9299;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,105,1896	1/1:0,9:9:24.08:634,24,0	0/0:27,0:27:54.18:0,54,974	0/0:27,0:27:69.22:0,69,1177	0/0:31,0:31:87.30:0,87,1588	0/0:23,0:23:63.22:0,63,1157	0/0:21,0:21:57.20:0,57,1037	0/0:35,0:35:90.22:0,90,1536	0/0:26,0:26:69.24:0,69,1258	1/1:6,22:28:66.19:1622,66,0	1/1:3,16:21:48.16:1266,48,0	0/0:28,0:28:78.25:0,78,1390	0/0:22,0:22:60.21:0,60,1096	0/0:24,0:24:66.23:0,66,1206	0/0:29,0:29:78.27:0,78,1425	1/1:8,20:28:72.25:1764,72,0	1/1:3,29:32:69.24:1821,69,0	0/0:26,0:26:75.26:0,75,1369	0/0:20,0:20:54.18:0,54,974	0/0:25,0:25:72.21:0,72,1289	0/0:45,0:45:99:0,126,2168	0/0:22,0:22:63.20:0,63,1119	0/0:30,0:30:81.26:0,81,1448	0/0:28,0:28:75.26:0,75,1379	0/0:20,0:20:54.17:0,54,963	0/0:28,0:28:72.21:0,72,1283	0/0:23,0:23:69.24:0,69,1235	0/0:14,0:14:39.13:0,39,718
chr10	84828024	.	C	CAG	13469.02	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-16.506;DP=887;FS=3.653;HRun=0;HaplotypeScore=117.2575;InbreedingCoeff=0.7997;MQ=65.57;MQ0=19;MQRankSum=1.711;QD=31.92;ReadPosRankSum=0.917;VQSLOD=7.1060;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,57:59:99:2383,126,0	0/1:6,0:6:7.30:7,0,77	0/0:52,0:25:50.74:0,51,766	0/0:81,0:53:99:0,115,1480	0/0:19,0:19:57.12:0,57,778	1/1:1,21:22:42.14:809,42,0	1/1:0,31:32:63.22:1214,63,0	1/1:5,30:35:84.17:1379,84,0	0/0:25,0:25:75.21:0,75,1081	0/1:28,0:28:21.01:21,0,237	0/0:20,0:20:46.20:0,46,255	0/0:31,0:31:93.28:0,93,1369	0/0:27,0:27:81.21:0,81,1189	0/0:35,0:35:99:0,102,1410	0/0:32,0:32:93.29:0,93,1374	0/1:29,0:29:11.41:11,0,285	0/0:38,0:38:39.40:0,39,492	0/0:25,0:25:66.02:0,66,881	1/1:2,23:24:65.84:1028,66,0	1/1:2,25:26:44.98:823,45,0	1/1:1,43:44:93.32:1793,93,0	1/1:3,29:29:45.15:861,45,0	0/0:30,0:30:87.28:0,87,1304	0/0:49,0:49:99:0,138,1915	1/1:0,20:20:51.17:983,51,0	1/1:4,22:26:50.86:828,51,0	1/1:0,21:21:54.19:1040,54,0	1/1:0,11:11:15.05:288,15,0
chr10	84828120	.	GTA	G	4695.47	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=15.498;DP=760;FS=1.192;HRun=0;HaplotypeScore=105.1306;InbreedingCoeff=0.9988;MQ=81.28;MQ0=0;MQRankSum=-3.150;QD=37.27;ReadPosRankSum=1.896;VQSLOD=6.5166;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:93.26:0,93,1581	1/1:0,8:8:21.07:294,21,0	0/0:25,0:24:66.16:0,66,1133	0/0:20,0:20:42.11:0,42,670	0/0:27,0:27:78.27:0,78,1395	0/0:27,0:26:78.27:0,78,1374	0/0:35,0:35:96.30:0,96,1623	0/0:22,0:22:60.15:0,60,1042	0/0:27,0:27:81.28:0,81,1451	1/1:1,33:34:99:1303,99,0	1/1:1,17:18:51.17:708,51,0	0/0:24,0:24:72.23:0,72,1251	0/0:21,0:21:63.20:0,63,1098	0/0:32,0:32:93.32:0,93,1674	0/0:31,0:31:93.32:0,93,1666	1/1:0,30:30:84.28:1173,84,0	1/1:0,36:36:87.29:1217,87,0	0/0:26,0:26:72.22:0,72,1262	0/0:23,0:23:63.17:0,63,1057	0/0:33,0:33:90.29:0,90,1570	0/0:42,0:42:99:0,117,2044	0/0:27,0:27:78.27:0,78,1388	0/0:30,0:30:90.26:0,90,1522	0/0:32,0:32:84.29:0,84,1480	0/0:18,0:18:51.17:0,51,918	0/0:34,1:35:54.31:0,54,1633	0/0:31,0:31:90.28:0,90,1537	0/0:9,0:9:27.09:0,27,486
chr10	84828260	.	A	AGGCTTCCGC	7990.52	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-4.629;DP=583;FS=5.432;HRun=0;HaplotypeScore=165.9026;InbreedingCoeff=0.9962;MQ=90.22;MQ0=0;MQRankSum=-10.484;QD=90.80;ReadPosRankSum=-0.970;VQSLOD=4.3117;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.20:0,66,1762	1/1:2,5:7:18.06:826,18,0	0/0:27,0:27:69.22:0,69,1797	0/0:23,0:23:50.38:0,50,1282	0/0:23,0:23:57.17:0,57,1522	0/0:30,0:30:87.30:0,87,2578	0/0:20,0:20:54.19:0,54,1559	0/0:38,0:38:99:0,102,2814	0/0:18,0:18:51.17:0,51,1447	1/1:8,16:25:60.02:2128,60,0	1/1:5,7:13:21.07:915,21,0	0/0:27,0:27:66.22:0,66,1894	0/0:21,0:21:63.22:0,63,1828	0/0:24,0:24:69.24:0,69,2007	0/0:16,0:16:45.15:0,45,1333	1/1:7,15:22:54.19:2476,54,0	1/1:9,10:21:39.13:1645,39,0	0/0:11,0:11:30.10:0,30,842	0/0:32,0:32:80.07:0,80,2019	0/0:17,0:16:33.11:0,33,930	0/0:16,0:16:42.12:0,42,1176	0/0:16,0:15:39.13:0,39,1155	0/0:17,0:17:51.15:0,51,1340	0/0:21,0:21:57.20:0,57,1600	0/0:13,0:13:36.12:0,36,1067	0/0:17,0:17:22.15:0,22,1136	0/0:29,0:29:75.26:0,75,2207	0/0:16,0:16:48.12:0,48,1229
chr10	84828291	.	GTAT	G	4485.56	PASS	AB=0.944;AC=13;AF=0.232;AN=56;BaseQRankSum=10.610;DP=572;FS=0.849;HRun=0;HaplotypeScore=98.3089;InbreedingCoeff=0.9155;MQ=82.14;MQ0=0;MQRankSum=-2.592;QD=28.57;ReadPosRankSum=-0.377;VQSLOD=4.4816;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.29:0,90,1845	0/0:9,0:9:21.07:0,21,444	0/0:24,0:25:41.09:0,41,992	0/0:21,0:21:39.13:0,39,795	0/0:20,0:20:54.17:0,54,1079	0/0:29,0:29:69.24:0,69,1462	0/0:18,0:18:42.14:0,42,891	1/1:9,28:37:84.25:1225,84,0	0/0:20,0:20:54.19:0,54,1128	0/0:18,0:18:39.13:0,39,822	0/0:8,0:8:21.07:0,21,418	0/0:30,0:30:78.27:0,78,1623	0/0:17,0:17:30.10:0,30,636	0/0:24,0:24:69.24:0,69,1449	0/0:19,0:19:48.14:0,48,941	0/1:16,1:17:6.39:6,0,701	0/0:18,0:18:33.08:0,33,628	0/0:15,0:15:30.10:0,30,613	1/1:7,19:26:54.16:795,54,0	1/1:2,15:16:32.94:501,33,0	1/1:8,11:19:27.09:410,27,0	1/1:2,11:12:30.10:456,30,0	0/0:13,0:13:39.12:0,39,764	0/0:24,0:24:57.15:0,57,1163	0/0:16,0:16:42.14:0,42,890	0/0:23,0:23:66.21:0,66,1325	1/1:4,24:28:72.24:1094,72,0	0/0:16,0:16:48.16:0,48,974
chr10	84828557	.	TAG	T	3965.26	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.691;DP=403;FS=2.191;HRun=0;HaplotypeScore=56.4237;InbreedingCoeff=0.9499;MQ=70.19;MQ0=1;MQRankSum=0.083;QD=38.13;ReadPosRankSum=-0.508;VQSLOD=5.1934;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1909	0/0:5,0:5:12.04:0,12,212	0/0:8,0:8:14.04:0,14,286	0/0:9,0:7:15.05:0,15,277	0/0:18,0:18:51.17:0,51,941	0/0:18,0:18:51.17:0,51,938	0/0:10,0:10:27.09:0,27,487	1/1:1,34:35:99:1456,102,0	0/0:12,0:12:36.12:0,36,633	0/0:13,0:13:39.13:0,39,719	0/0:3,0:3:9.03:0,9,166	0/0:13,0:13:36.12:0,36,638	0/0:10,0:10:30.10:0,30,545	0/0:8,0:8:21.07:0,21,388	0/0:13,0:13:39.12:0,39,689	0/0:18,0:18:42.14:0,42,771	0/0:8,0:8:21.06:0,21,356	0/0:26,0:26:75.21:0,75,1331	1/1:1,11:12:30.10:439,30,0	1/1:1,17:19:48.16:707,48,0	1/1:1,7:8:21.07:309,21,0	1/1:1,2:2:6.02:88,6,0	0/0:8,0:8:24.08:0,24,433	0/0:8,0:8:24.08:0,24,435	0/0:16,0:16:45.15:0,45,831	0/0:17,0:17:48.16:0,48,880	1/1:2,25:27:66.22:967,66,0	0/0:21,0:21:60.21:0,60,1108
chr10	84828573	.	ATT	A	1631.26	PASS	AC=8;AF=0.174;AN=46;BaseQRankSum=0.976;DP=312;FS=4.976;HRun=9;HaplotypeScore=53.2729;InbreedingCoeff=0.8968;MQ=64.21;MQ0=14;MQRankSum=0.759;QD=27.65;ReadPosRankSum=2.480;VQSLOD=3.4589;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81:0,81,1190	./.	0/0:6,0:6:12.02:0,12,135	0/0:8,0:4:6.02:0,6,83	0/0:15,0:15:42.13:0,42,664	1/1:1,16:17:48.14:559,48,0	0/0:9,0:9:24.08:0,24,393	0/0:38,0:33:90.31:0,90,1444	0/0:9,0:9:27.09:0,27,436	./.	./.	0/0:10,0:10:24.08:0,24,377	0/0:6,0:7:21.02:0,21,294	0/0:5,0:4:12.04:0,12,197	0/0:7,0:6:18.06:0,18,295	./.	./.	0/0:25,0:23:66.23:0,66,1074	0/0:15,0:15:42.14:0,42,674	0/0:15,0:15:45.14:0,45,699	0/0:5,0:5:12.04:0,12,190	0/0:2,0:2:6.02:0,6,98	0/0:5,0:5:12.04:0,12,197	0/0:6,0:6:12.04:0,12,197	1/1:2,11:13:30.09:350,30,0	1/1:3,10:11:30.09:350,30,0	0/0:26,0:25:57.11:0,57,862	1/1:0,16:16:45.13:524,45,0
chr10	84828769	.	CTTT	C	1267.97	PASS	AB=0.575;AC=14;AF=0.292;AN=48;BaseQRankSum=-1.959;DP=289;FS=0.776;HRun=16;HaplotypeScore=70.6216;InbreedingCoeff=0.5300;MQ=68.29;MQ0=6;MQRankSum=-3.767;QD=10.84;ReadPosRankSum=1.197;VQSLOD=0.2348;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:24:18.17:0,18,345	./.	0/0:23,0:13:21.06:0,21,258	0/0:23,0:13:20.98:0,21,220	0/0:13,0:13:27:0,27,364	0/1:3,3:16:16.67:77,0,17	0/0:8,0:11:17.46:0,17,153	1/1:8,9:18:6.41:254,6,0	0/0:9,0:11:27.27:0,27,365	./.	./.	0/0:7,0:6:12.04:0,12,181	0/0:6,0:5:12.04:0,12,200	0/0:11,0:12:23.93:0,24,261	0/0:8,0:6:14.75:0,15,190	./.	0/0:1,0:1:2.60:0,3,10	0/0:13,0:12:18.02:0,18,260	0/1:6,5:12:9.85:111,0,10	1/1:5,7:13:23.86:244,24,0	1/1:4,8:11:24.02:254,24,0	1/1:2,7:8:18:185,18,0	0/0:3,0:3:9.03:0,9,159	0/0:7,0:8:18.51:0,19,278	0/0:1,0:6:4.53:0,5,11	0/1:4,1:12:20.56:36,0,21	1/1:6,7:13:23.99:256,24,0	0/1:0,1:10:8.27:19,0,8
chr10	84828782	.	TTTTG	T	463.93	PASS	AB=0.952;AC=9;AF=0.188;AN=48;BaseQRankSum=3.396;DP=282;FS=4.375;HRun=0;HaplotypeScore=76.7122;InbreedingCoeff=0.2256;MQ=58.41;MQ0=7;MQRankSum=-2.161;QD=5.10;ReadPosRankSum=3.396;VQSLOD=0.7558;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,1:20:8.26:0,8,597	./.	0/0:18,0:9:12.49:0,12,304	0/0:16,0:8:20.84:0,21,237	0/0:12,0:12:30.09:0,30,507	0/0:14,0:14:4.55:0,5,162	0/0:11,0:11:21.14:0,21,191	0/1:14,1:15:42.47:124,0,42	0/0:15,0:13:35.88:0,36,433	./.	./.	0/0:8,0:5:12.04:0,12,168	0/0:9,0:7:14.97:0,15,253	0/0:13,0:12:23.57:0,24,313	0/0:7,0:5:13.29:0,13,199	./.	0/0:1,0:1:2.04:0,2,6	0/0:14,0:11:18.06:0,18,360	0/1:15,1:15:44.11:44,0,108	0/1:13,0:13:36.80:86,0,37	1/1:12,0:10:7.50:81,7,0	1/1:8,0:7:16.42:116,16,0	0/0:3,0:3:9.03:0,9,185	0/0:12,0:11:21.40:0,21,361	0/0:7,0:7:13.87:0,14,83	0/1:12,0:12:8.88:9,0,89	0/1:13,2:14:44.84:141,0,45	0/0:11,0:11:17.86:0,18,167
chr10	84829247	.	GATATT	G	5155.78	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.343;DP=685;FS=4.622;HRun=0;HaplotypeScore=128.1777;InbreedingCoeff=0.9988;MQ=85.08;MQ0=2;MQRankSum=-8.618;QD=52.08;ReadPosRankSum=3.844;VQSLOD=5.3201;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.24:0,87,2486	1/1:1,10:10:27.09:559,27,0	0/0:24,0:24:60.21:0,60,1707	0/0:35,0:35:78.22:0,78,2296	0/0:27,0:27:78.27:0,78,2396	0/0:21,0:21:63.22:0,63,1929	0/0:23,0:23:69.22:0,69,2023	0/0:41,0:41:99:0,108,3242	0/0:26,0:26:66.21:0,66,1962	1/1:2,21:23:63.22:1306,63,0	1/1:1,18:19:54.19:1114,54,0	0/0:22,0:22:66.23:0,66,2027	0/0:25,0:25:72.25:0,72,2210	0/0:17,0:17:39.12:0,39,1105	0/0:28,0:28:84.29:0,84,2437	1/1:4,25:28:66.23:1368,66,0	1/1:2,15:17:39.13:808,39,0	0/0:18,0:18:54.19:0,54,1634	0/0:29,0:29:72.24:0,72,2101	0/0:25,0:25:75.26:0,75,2218	0/0:27,0:27:72.25:0,72,2211	0/0:25,0:25:63.22:0,63,1840	0/0:27,0:27:66.23:0,66,1982	0/0:36,0:36:96.30:0,96,2769	0/0:9,0:9:21.07:0,21,645	0/0:26,0:26:72.25:0,72,2191	0/0:29,0:29:81.28:0,81,2490	0/0:16,0:16:42.14:0,42,1158
chr10	84829733	.	G	GT	3766.69	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-4.310;DP=584;FS=0.932;HRun=3;HaplotypeScore=55.2668;InbreedingCoeff=0.9986;MQ=74.13;MQ0=0;MQRankSum=-2.206;QD=36.57;ReadPosRankSum=0.966;VQSLOD=4.1194;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.23:0,84,987	1/1:0,7:7:21.07:294,21,0	0/0:22,0:22:35.23:0,35,430	0/0:14,0:14:25.43:0,25,306	0/0:28,0:28:78.20:0,78,901	0/0:14,0:14:42.13:0,42,504	0/0:18,0:18:48.13:0,48,563	0/0:24,0:24:69.21:0,69,828	0/0:21,0:21:60.18:0,60,720	1/1:0,18:18:54.18:755,54,0	1/1:0,15:15:39.13:546,39,0	0/0:18,0:18:51.13:0,51,589	0/0:17,0:17:48.15:0,48,575	0/0:17,0:17:48.12:0,48,554	0/0:20,0:20:60.17:0,60,708	1/1:2,20:22:48.16:664,48,0	1/1:0,41:41:99:1508,108,0	0/0:21,0:21:63.18:0,63,744	0/0:14,0:14:39.09:0,39,447	0/0:25,0:25:69.20:0,69,817	0/0:29,0:29:84.26:0,84,1008	0/0:14,0:14:42.13:0,42,503	0/0:15,0:15:45.14:0,45,540	0/0:22,0:22:63.16:0,63,730	0/0:30,0:29:87.25:0,87,1030	0/0:28,0:28:81.24:0,81,963	0/0:26,0:25:78.24:0,78,930	0/0:13,0:13:39.12:0,39,468
chr10	84829852	.	T	TAAAGGTAAGATTGGCCTAA	14908.02	PASS	AB=0.931;AC=10;AF=0.179;AN=56;BaseQRankSum=4.028;DP=662;FS=3.577;HRun=0;HaplotypeScore=313.5047;InbreedingCoeff=0.7641;MQ=74.92;MQ0=0;MQRankSum=-12.085;QD=92.02;ReadPosRankSum=-2.465;VQSLOD=3.6486;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:23.91:0,24,1136	1/1:5,4:9:15.05:1223,15,0	0/0:15,0:15:21:0,21,586	0/1:16,0:16:8.26:8,0,617	0/0:19,0:19:39.12:0,39,1803	0/0:25,0:25:57.18:0,57,2444	0/0:27,0:27:60.19:0,60,2433	0/0:35,0:35:69.22:0,69,2684	0/0:32,0:32:78.25:0,78,3391	1/1:33,6:38:69.24:4999,69,0	1/1:32,4:36:48.08:2789,48,0	0/0:20,0:20:42.13:0,42,1914	0/0:24,0:24:66.23:0,66,3297	0/0:26,0:26:66.20:0,66,2929	0/0:33,0:33:81.25:0,81,3416	0/1:26,4:31:99:3586,0,103	1/1:24,5:29:28.34:2303,28,0	0/0:20,0:20:42.14:0,42,1985	0/0:18,0:18:42.12:0,42,1370	0/0:24,0:24:51.17:0,51,2364	0/0:21,0:20:48.16:0,48,2102	0/0:19,0:19:45.15:0,45,1965	0/0:14,0:14:33.11:0,33,1547	0/0:26,0:26:60.19:0,60,2675	0/0:25,0:25:72.25:0,72,3477	0/0:21,0:21:54.19:0,54,2529	0/0:29,0:29:75.22:0,75,3062	0/0:12,0:12:33.11:0,33,1622
chr10	84830728	.	AT	A	1576.86	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.332;DP=485;FS=1.916;HRun=4;HaplotypeScore=76.1664;InbreedingCoeff=0.9592;MQ=75.46;MQ0=0;MQRankSum=-4.715;QD=28.67;ReadPosRankSum=0.959;VQSLOD=3.3593;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,1801	0/0:6,0:6:11.99:0,12,130	0/0:12,0:12:20.27:0,20,200	0/0:10,0:10:8.56:0,9,84	0/0:11,0:11:33.10:0,33,444	1/1:3,13:16:42.12:492,42,0	0/0:19,0:19:57.18:0,57,781	0/0:43,0:43:99:0,117,1574	0/0:19,0:19:57.18:0,57,780	0/0:15,0:15:42.13:0,42,567	0/0:10,0:10:30.06:0,30,388	0/0:19,0:19:54.18:0,54,755	0/0:15,0:15:36.11:0,36,484	0/0:18,0:18:51.17:0,51,708	0/0:15,0:15:45.14:0,45,611	0/0:24,0:24:69.20:0,69,944	0/0:19,0:19:42.12:0,42,557	0/0:13,0:13:33.11:0,33,461	0/0:19,0:19:51.16:0,51,696	0/0:11,0:11:33.11:0,33,461	0/0:28,0:28:75.22:0,75,1014	0/0:5,0:5:15.04:0,15,195	0/0:12,0:12:36.10:0,36,484	0/0:19,0:19:51.17:0,51,707	1/1:2,10:12:30.08:349,30,0	1/1:7,15:22:66.15:750,66,0	0/0:22,0:22:66.21:0,66,904	1/1:1,4:5:12.04:143,12,0
chr10	84830750	.	T	TTTTCAC	11428.94	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=0.597;DP=429;FS=0.402;HRun=0;HaplotypeScore=90.3187;InbreedingCoeff=0.9776;MQ=74.52;MQ0=0;MQRankSum=-14.568;QD=100.25;ReadPosRankSum=1.624;VQSLOD=6.6883;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,2660	1/1:0,5:5:15.05:548,15,0	0/0:12,0:12:34.65:0,35,750	0/0:13,0:13:36.12:0,36,829	0/0:8,0:8:24.07:0,24,511	1/1:4,11:15:45.15:1630,45,0	0/0:16,0:16:48.16:0,48,1143	0/0:44,0:44:99:0,126,2862	0/0:13,0:13:39.13:0,39,944	1/1:2,6:9:27.08:904,27,0	1/1:2,3:6:15.01:457,15,0	0/0:15,0:15:45.14:0,45,1046	0/0:9,0:9:27.08:0,27,547	0/0:17,0:17:48.15:0,48,1115	0/0:15,0:15:45.15:0,45,1068	1/1:6,14:20:60.17:2054,60,0	1/1:8,14:24:63.17:2177,63,0	0/0:17,0:17:51.17:0,51,1205	0/0:15,0:15:42.13:0,42,975	0/0:9,0:9:24.07:0,24,512	0/0:29,0:29:84.29:0,84,1964	0/0:4,0:4:9.03:0,9,219	0/0:5,0:5:15.05:0,15,364	0/0:17,0:17:48.16:0,48,1164	1/1:2,11:13:39.09:1334,39,0	1/1:4,14:18:54.19:1887,54,0	0/0:18,0:18:51.14:0,51,1113	1/1:0,4:4:12.04:439,12,0
chr10	84831426	.	AAAC	A	6265.68	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.192;DP=592;FS=1.227;HRun=0;HaplotypeScore=93.8657;InbreedingCoeff=0.9970;MQ=68.06;MQ0=1;MQRankSum=-5.948;QD=33.33;ReadPosRankSum=-0.057;VQSLOD=4.8662;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:54.26:0,54,1398	1/1:0,8:8:18.05:276,18,0	0/0:31,0:27:46.75:0,47,886	0/0:22,0:20:27.26:0,27,440	0/0:23,0:23:69.21:0,69,1373	1/1:2,10:12:36.08:526,36,0	1/1:2,20:22:33.11:507,33,0	0/0:24,0:24:54.17:0,54,1080	0/0:25,0:25:63.22:0,63,1337	1/1:3,24:27:72.23:1065,72,0	1/1:2,9:11:26.98:360,27,0	0/0:28,0:28:72.22:0,72,1432	0/0:15,0:15:39.11:0,39,774	0/0:18,0:18:51.14:0,51,962	0/0:22,0:22:60.21:0,60,1272	1/1:2,17:19:42.14:629,42,0	1/1:7,26:33:66.22:1003,66,0	0/0:22,0:22:66.18:0,66,1235	0/0:14,0:14:36.12:0,36,677	0/0:18,0:18:54.16:0,54,1042	0/0:25,0:25:66.23:0,66,1383	0/0:15,0:15:39.12:0,39,756	0/0:10,0:10:27.08:0,27,492	0/0:19,0:19:48.16:0,48,998	1/1:8,15:23:48.12:711,48,0	1/1:8,17:24:63.20:940,63,0	0/0:47,0:47:99:0,126,2463	1/1:2,6:7:18.02:249,18,0
chr10	84831453	.	G	GA	1608.66	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=5.101;DP=570;FS=5.274;HRun=7;HaplotypeScore=85.7645;InbreedingCoeff=0.8644;MQ=76.73;MQ0=1;MQRankSum=-6.923;QD=18.28;ReadPosRankSum=-0.899;VQSLOD=3.1894;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:69.08:0,69,659	0/0:8,0:8:18.02:0,18,174	0/0:32,0:25:37.61:0,38,393	0/1:25,0:23:45.92:46,0,209	0/0:26,0:26:75.11:0,75,719	1/1:0,11:11:33.07:383,33,0	0/0:22,0:21:45.07:0,45,434	0/0:24,0:24:63.09:0,63,603	0/0:28,0:28:66.08:0,66,631	0/0:25,0:25:66.09:0,66,633	0/0:12,0:12:36.06:0,36,347	0/0:20,0:20:54.08:0,54,521	0/0:19,0:19:57.09:0,57,550	0/0:15,0:15:45.07:0,45,435	0/0:21,0:21:54.08:0,54,521	0/0:16,0:16:33.04:0,33,319	0/0:35,0:35:83.94:0,84,797	0/0:18,0:18:48.08:0,48,464	0/0:12,0:12:36.06:0,36,348	0/0:15,0:15:45.05:0,45,424	0/0:21,0:21:54.08:0,54,522	0/0:11,0:11:24.03:0,24,232	0/0:11,0:11:33.05:0,33,319	0/0:18,0:18:54.09:0,54,522	1/1:5,11:16:36.06:407,36,0	1/1:6,18:24:54.17:651,54,0	0/0:44,0:44:99:0,117,1106	1/1:3,9:11:24.07:286,24,0
chr10	84831710	.	GAATA	G	1025.92	PASS	AC=10;AF=0.200;AN=50;BaseQRankSum=-0.063;DP=345;FS=4.011;HRun=0;HaplotypeScore=70.5623;InbreedingCoeff=0.8018;MQ=40.19;MQ0=44;MQRankSum=-4.447;QD=15.54;ReadPosRankSum=-1.001;VQSLOD=2.5302;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:30:0.83:0,1,920	0/0:7,0:7:12.04:0,12,312	./.	./.	0/0:19,0:16:26.23:0,26,689	0/0:21,0:20:45.15:0,45,1003	0/0:7,0:6:15.05:0,15,348	1/1:9,2:8:9.03:160,9,0	0/0:9,0:9:14.92:0,15,384	0/0:22,0:21:54.18:0,54,1320	0/0:7,0:6:12.04:0,12,311	0/0:8,0:5:5.91:0,6,156	0/0:4,0:4:9:0,9,178	0/0:5,0:4:9.03:0,9,196	0/0:10,0:9:18.06:0,18,403	0/0:10,0:10:12.04:0,12,284	0/0:24,0:17:33.11:0,33,835	0/0:37,0:22:36.12:0,36,919	1/1:6,5:9:15.05:269,15,0	1/1:4,6:8:5.95:72,6,0	1/1:6,2:5:9.03:126,9,0	./.	0/0:6,0:6:12.04:0,12,208	0/0:8,0:8:18.06:0,18,465	0/0:14,0:14:36.05:0,36,818	0/0:14,0:13:30.10:0,30,663	1/1:13,13:21:33.11:552,33,0	0/0:10,0:9:20.99:0,21,481
chr10	84831724	.	TA	T	414.57	PASS	AB=0.789;AC=14;AF=0.250;AN=56;BaseQRankSum=1.244;DP=367;FS=0.000;HRun=14;HaplotypeScore=65.2274;InbreedingCoeff=0.5082;MQ=50.14;MQ0=22;MQRankSum=-2.890;QD=4.56;ReadPosRankSum=-1.907;VQSLOD=0.9512;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:32:43.57:0,44,261	0/0:8,0:8:13.66:0,14,60	0/1:5,0:4:15.23:15,0,35	0/1:7,0:2:1.93:2,0,20	0/0:21,0:20:45.51:0,46,414	0/0:18,0:18:41.22:0,41,183	1/1:4,0:4:4.21:11,4,0	0/1:7,6:10:32:76,0,32	0/0:13,0:13:26.93:0,27,232	0/0:27,0:27:47.61:0,48,249	0/0:8,0:7:16.47:0,16,73	0/0:7,0:5:5.99:0,6,51	0/0:5,0:5:9.01:0,9,84	0/0:3,0:2:6:0,6,52	0/0:10,0:10:18.02:0,18,167	0/0:13,0:13:16.52:0,17,74	0/0:19,0:17:30.24:0,30,135	0/0:31,1:25:30.04:0,30,390	1/1:6,7:10:17.83:123,18,0	1/1:2,7:8:5.91:41,6,0	0/1:3,4:7:9.92:33,0,10	1/1:2,1:3:2.97:21,3,0	0/0:4,1:5:12.01:0,12,111	0/0:8,0:8:21.02:0,21,194	0/0:12,0:12:30.18:0,30,133	0/0:17,0:16:20.65:0,21,104	1/1:6,22:24:16.54:254,17,0	0/0:12,0:11:22.05:0,22,99
chr10	84831735	.	A	AAG	4649.33	PASS	AB=0.808;AC=20;AF=0.357;AN=56;BaseQRankSum=-2.142;DP=402;FS=13.137;HRun=0;HaplotypeScore=66.5423;InbreedingCoeff=0.7970;MQ=66.02;MQ0=16;MQRankSum=1.017;QD=24.60;ReadPosRankSum=4.987;VQSLOD=4.2699;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:29:99:249,0,118	1/1:0,7:8:14.88:205,15,0	0/0:17,0:15:6.63:0,7,203	0/0:11,0:5:11.80:0,12,90	0/0:20,0:19:48.36:0,48,602	1/1:2,16:18:45.13:713,45,0	0/0:4,0:4:7.41:0,7,77	0/0:13,0:12:29.95:0,30,275	0/0:11,0:11:30.01:0,30,343	1/1:2,26:29:75.16:1030,75,0	1/1:0,9:9:18.06:284,18,0	0/0:6,0:4:6.01:0,6,65	0/0:5,0:5:12.01:0,12,139	0/0:5,0:4:11.98:0,12,113	0/0:9,0:9:23.99:0,24,277	1/1:0,13:13:18.06:273,18,0	1/1:2,18:19:33.11:522,33,0	0/0:28,0:23:53.96:0,54,635	0/0:22,0:21:44.89:0,45,363	0/0:12,0:11:17.93:0,18,141	0/1:9,0:8:2.03:2,0,78	0/0:4,0:4:5.99:0,6,51	0/0:6,0:6:18:0,18,204	0/0:8,0:8:24.07:0,24,305	1/1:2,12:15:32.97:490,33,0	1/1:3,16:18:35.96:511,36,0	0/0:32,0:28:56.85:0,57,470	1/1:3,13:14:24.08:369,24,0
chr10	84831847	.	GGAC	G	9636.57	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=15.117;DP=481;FS=26.540;HRun=0;HaplotypeScore=78.2976;InbreedingCoeff=0.9959;MQ=79.36;MQ0=0;MQRankSum=-8.859;QD=43.80;ReadPosRankSum=-0.385;VQSLOD=3.2605;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:33:81.28:1411,81,0	0/0:7,0:7:21.07:0,21,462	0/0:19,0:19:56.78:0,57,1226	0/0:22,0:21:48.16:0,48,1037	0/0:14,0:14:42.14:0,42,964	1/1:0,16:16:45.11:753,45,0	1/1:1,14:15:33.11:576,33,0	1/1:1,17:18:51.15:819,51,0	0/0:7,0:7:18.05:0,18,370	0/0:31,0:31:93.32:0,93,2058	0/0:13,0:13:36.12:0,36,804	0/0:16,0:16:45.15:0,45,1000	0/0:14,0:14:39.13:0,39,884	0/0:17,0:17:48.16:0,48,1069	0/0:21,0:21:57.19:0,57,1286	0/0:8,0:8:18.06:0,18,413	0/0:21,0:21:63.22:0,63,1435	0/0:19,0:19:54.19:0,54,1241	1/1:1,19:18:54.16:890,54,0	1/1:1,15:16:45.15:766,45,0	1/1:1,29:30:75.21:1276,75,0	1/1:0,16:16:42.10:699,42,0	0/0:13,0:13:39.11:0,39,818	0/0:19,0:19:51.17:0,51,1129	1/1:0,13:13:36.12:627,36,0	1/1:1,16:17:51.17:875,51,0	1/1:0,12:11:18.06:314,18,0	1/1:0,13:13:36.12:629,36,0
chr10	84831911	.	T	TTAAA	2060.10	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.081;DP=419;FS=0.000;HRun=0;HaplotypeScore=89.9847;InbreedingCoeff=0.9553;MQ=90.21;MQ0=0;MQRankSum=-5.035;QD=68.67;ReadPosRankSum=0.326;VQSLOD=5.5693;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:60.17:0,60,1056	0/0:8,0:8:24.04:0,24,412	0/0:16,0:16:45.13:0,45,764	0/0:21,0:21:48.16:0,48,860	0/0:12,0:12:33.11:0,33,616	1/1:3,12:15:42.14:1093,42,0	0/0:18,0:18:39.09:0,39,692	0/0:14,0:14:33.11:0,33,605	0/0:8,0:8:21.07:0,21,392	0/0:23,0:23:63.22:0,63,1161	0/0:9,0:9:24.08:0,24,448	0/0:13,0:13:39.13:0,39,724	0/0:12,0:12:33.11:0,33,615	0/0:19,0:19:57.20:0,57,1056	0/0:10,0:10:27.09:0,27,504	0/0:9,0:9:27.09:0,27,504	0/0:23,0:23:66.23:0,66,1232	0/0:12,0:12:36.12:0,36,672	0/0:24,0:23:63.22:0,63,1166	0/0:10,0:10:27.09:0,27,503	0/0:18,0:18:45.15:0,45,839	0/0:11,0:11:33.10:0,33,586	0/0:11,0:11:27.09:0,27,487	0/0:26,0:26:63.22:0,63,1176	1/1:5,10:15:45.15:1089,45,0	0/0:18,0:18:33.59:0,34,132	0/0:13,0:13:24.08:0,24,448	0/0:5,0:5:7.79:0,8,31
chr10	84831912	.	T	TA	771.87	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.133;DP=410;FS=3.102;HRun=4;HaplotypeScore=65.8103;InbreedingCoeff=0.9636;MQ=90.85;MQ0=0;MQRankSum=-6.085;QD=16.42;ReadPosRankSum=1.649;VQSLOD=3.0908;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:63.09:0,63,669	0/0:8,0:8:21.06:0,21,238	0/0:17,0:17:42.07:0,42,451	0/0:20,0:20:51.11:0,51,562	0/0:12,0:12:33.09:0,33,374	1/1:14,0:14:32.93:142,33,0	0/0:17,0:17:38.94:0,39,421	0/0:12,0:12:33.07:0,33,357	0/0:8,0:8:21.06:0,21,238	0/0:23,0:23:63.14:0,63,699	0/0:9,0:9:24.07:0,24,270	0/0:13,0:13:39.11:0,39,441	0/0:12,0:12:33.09:0,33,374	0/0:19,0:19:57.14:0,57,635	0/0:10,0:10:30.07:0,30,331	0/0:9,0:9:27.08:0,27,306	0/0:25,0:25:66.19:0,66,748	0/0:12,0:12:36.10:0,36,408	0/0:24,0:23:66.13:0,66,723	0/0:10,0:10:27.07:0,27,300	0/0:18,0:18:45.12:0,45,505	0/0:11,0:11:30.08:0,30,329	0/0:11,0:11:27.06:0,27,297	0/0:25,0:25:69.16:0,69,761	1/1:15,0:15:9.54:101,10,0	1/1:2,13:15:42.13:558,42,0	0/0:13,0:13:24.07:0,24,271	1/1:0,3:3:9.03:123,9,0
chr10	84832102	.	G	GCCCC	17087.22	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=17.760;DP=639;FS=0.634;HRun=0;HaplotypeScore=192.3871;InbreedingCoeff=0.6347;MQ=84.44;MQ0=0;MQRankSum=-18.897;QD=47.07;ReadPosRankSum=-0.941;VQSLOD=5.1087;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:35:78.12:2099,78,0	1/1:8,0:8:18.95:352,19,0	0/0:26,0:26:75.26:0,75,1498	0/0:29,0:29:81.25:0,81,1557	0/0:20,0:20:60.15:0,60,1147	1/1:5,19:23:60.21:1713,60,0	1/1:4,35:40:93.28:2605,93,0	0/1:24,0:24:39.79:831,0,40	0/0:26,0:26:78.25:0,78,1583	1/1:31,0:31:54.15:1454,54,0	1/1:14,0:14:27.56:546,28,0	0/0:29,0:29:87.28:0,87,1741	0/0:18,0:18:54.17:0,54,1081	0/0:26,0:26:78.27:0,78,1623	0/0:31,0:31:93.32:0,93,1950	0/1:19,0:19:7.69:791,0,8	1/1:26,0:26:1.44:963,1,0	0/0:29,0:29:87.27:0,87,1759	0/1:24,0:24:67.18:732,0,67	1/1:8,0:8:21.07:432,21,0	1/1:21,0:21:14.08:520,14,0	1/1:21,0:21:42.94:780,43,0	0/0:14,0:14:42.13:0,42,841	0/0:28,0:28:84.24:0,84,1624	0/1:11,0:11:4.90:334,0,5	1/1:2,19:23:60.20:1598,60,0	0/1:26,0:26:20.46:904,0,20	1/1:2,6:7:15.05:432,15,0
chr10	84832103	.	T	TC	4547.44	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=19.116;DP=635;FS=0.000;HRun=2;HaplotypeScore=208.9249;InbreedingCoeff=0.9733;MQ=84.56;MQ0=0;MQRankSum=-18.786;QD=12.60;ReadPosRankSum=-0.418;VQSLOD=3.5047;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:67.64:317,68,0	1/1:2,6:8:16.34:119,16,0	0/0:26,0:26:78.13:0,78,924	0/0:29,0:29:81.21:0,81,962	0/0:20,0:20:57.15:0,57,679	1/1:24,0:23:53.59:251,54,0	1/1:39,0:39:59.48:360,59,0	1/1:12,12:24:49.23:387,49,0	0/0:25,0:25:75.24:0,75,929	1/1:9,22:31:47.98:520,48,0	1/1:5,10:15:29.73:215,30,0	0/0:29,0:29:87.27:0,87,1071	0/0:17,0:17:51.15:0,51,620	0/0:26,0:26:78.25:0,78,967	0/0:32,0:32:93.29:0,93,1153	1/1:6,13:19:24.31:284,24,0	1/1:11,14:25:7.91:332,8,0	0/0:29,0:29:84.25:0,84,1030	1/1:13,11:24:13.15:318,13,0	1/1:1,7:8:20.88:154,21,0	1/1:8,13:21:29.49:211,29,0	1/1:10,12:22:10.48:223,10,0	0/0:14,0:14:39.12:0,39,483	0/0:27,0:27:78.25:0,78,967	1/1:5,6:11:17.91:132,18,0	1/1:23,0:23:58.04:275,58,0	1/1:9,17:26:44.82:384,45,0	1/1:8,0:7:14.03:66,14,0
chr10	84832106	.	T	TCCC	13016.89	PASS	AB=0.638;AC=30;AF=0.536;AN=56;BaseQRankSum=18.908;DP=627;FS=0.000;HRun=2;HaplotypeScore=200.8366;InbreedingCoeff=0.6820;MQ=85.17;MQ0=0;MQRankSum=-18.781;QD=36.88;ReadPosRankSum=-1.007;VQSLOD=3.2290;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:34:84.56:1194,85,0	0/1:2,6:8:10.32:277,0,10	0/0:27,0:27:81.22:0,81,1345	0/0:28,0:28:84.18:0,84,1381	0/0:20,0:20:60.16:0,60,997	1/1:21,0:20:60.20:908,60,0	1/1:35,0:35:99:1418,99,0	0/1:16,11:28:48.28:889,0,48	0/0:25,0:25:75.26:0,75,1373	1/1:9,21:31:45.32:1421,45,0	1/1:4,10:14:30.04:487,30,0	0/0:29,0:29:87.28:0,87,1542	0/0:17,0:17:51.16:0,51,919	0/0:27,0:27:78.25:0,78,1422	0/0:32,0:32:96.32:0,96,1759	1/1:5,13:18:15.32:797,15,0	1/1:11,14:25:28.57:966,29,0	0/0:29,0:29:87.24:0,87,1524	0/1:13,11:24:25.47:752,0,25	1/1:0,7:7:21.07:367,21,0	1/1:9,13:22:2.01:510,2,0	1/1:8,12:20:10.67:666,11,0	0/0:14,0:14:42.13:0,42,751	0/0:26,0:26:78.27:0,78,1444	1/1:5,6:11:21.06:339,21,0	1/1:23,0:23:66.18:934,66,0	0/1:8,17:25:31.72:850,0,32	1/1:7,0:6:18.02:243,18,0
chr10	84832398	.	C	CT	473.54	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.197;DP=568;FS=5.099;HRun=0;HaplotypeScore=115.7864;InbreedingCoeff=0.9905;MQ=84.38;MQ0=0;MQRankSum=-5.828;QD=24.92;ReadPosRankSum=-0.962;VQSLOD=3.6323;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:47.75:568,48,0	0/0:7,0:7:18.06:0,18,251	0/0:21,0:21:60.18:0,60,808	0/0:18,0:18:51.15:0,51,644	0/0:25,0:25:72.24:0,72,1005	0/0:23,0:23:60.20:0,60,837	0/0:25,0:25:72.24:0,72,995	0/0:27,0:27:69.22:0,69,947	0/0:20,0:20:57.15:0,57,775	0/0:23,0:23:69.15:0,69,914	0/0:18,0:18:51.23:0,51,654	0/0:15,0:15:45.15:0,45,628	0/0:17,0:17:48.16:0,48,671	0/0:15,0:15:42.14:0,42,583	0/0:24,0:24:72.24:0,72,1000	0/0:14,0:14:30.10:0,30,418	0/0:35,0:35:93.31:0,93,1287	0/0:22,0:22:66.22:0,66,922	0/0:17,0:16:48.15:0,48,654	0/0:27,0:27:78.26:0,78,1079	0/0:22,0:22:54.18:0,54,747	0/0:17,0:17:48.15:0,48,654	0/0:21,0:21:63.21:0,63,880	0/0:30,0:30:90.26:0,90,1236	0/0:18,0:18:54.18:0,54,753	0/0:17,0:17:48.16:0,48,674	0/0:22,0:22:60.20:0,60,823	0/0:9,0:9:27.09:0,27,376
chr10	84832403	.	GC	G	165.21	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.548;DP=567;FS=3.642;HRun=1;HaplotypeScore=116.1208;InbreedingCoeff=0.9695;MQ=88.10;MQ0=0;MQRankSum=-6.006;QD=9.18;ReadPosRankSum=-1.256;VQSLOD=0.9021;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:37.74:260,38,0	0/0:7,0:7:12.11:0,12,279	0/0:26,0:26:75.18:0,75,1097	0/0:19,0:19:53.45:0,53,667	0/0:24,0:24:72.22:0,72,1123	0/0:25,0:25:61.61:0,62,923	0/0:22,0:22:66.23:0,66,1053	0/0:28,0:28:78.25:0,78,1203	0/0:21,0:21:60.19:0,60,930	0/0:20,0:20:60.20:0,60,958	0/0:17,0:17:40.27:0,40,715	0/0:13,0:13:39.13:0,39,623	0/0:19,0:19:54.17:0,54,838	0/0:15,0:15:45.15:0,45,719	0/0:23,0:23:69.22:0,69,1077	0/0:15,0:15:36.12:0,36,574	0/0:35,0:35:93.32:0,93,1483	0/0:23,0:23:69.24:0,69,1103	0/0:16,0:15:48.16:0,48,767	0/0:26,0:26:75.26:0,75,1196	0/0:23,0:23:60.20:0,60,945	0/0:16,0:16:45.14:0,45,695	0/0:21,0:21:63.21:0,63,1006	0/0:30,0:30:90.29:0,90,1412	0/0:18,0:18:54.18:0,54,862	0/0:19,0:19:57.19:0,57,880	0/0:19,0:19:57.13:0,57,880	0/0:9,0:9:27.09:0,27,431
chr10	84832407	.	TGAAG	T	499.49	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.543;DP=584;FS=6.830;HRun=0;HaplotypeScore=151.6027;InbreedingCoeff=0.8299;MQ=90.27;MQ0=0;MQRankSum=-4.674;QD=24.97;ReadPosRankSum=-0.219;VQSLOD=3.1788;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:20:4.19:578,4,0	0/0:7,0:7:21.07:0,21,336	0/0:29,0:29:78.26:0,78,2016	0/0:21,0:22:52.27:0,52,1278	0/0:25,0:25:75.26:0,75,2034	0/0:25,0:25:52.38:0,52,1087	0/0:23,0:23:69.18:0,69,1771	0/0:30,0:30:84.29:0,84,2276	0/0:20,0:20:57.20:0,57,1558	0/0:20,0:20:60.20:0,60,1074	0/0:17,0:17:48.92:0,49,755	0/0:15,0:15:45.15:0,45,1227	0/0:18,0:18:54.19:0,54,1457	0/0:16,0:16:42.14:0,42,1117	0/0:23,0:23:69.24:0,69,1885	0/0:15,0:15:36.12:0,36,650	0/0:34,0:34:84.26:0,84,1498	0/0:23,0:23:63.22:0,63,1721	0/0:18,0:17:54.19:0,54,1445	0/0:24,0:24:69.21:0,69,1828	0/0:22,0:22:60.21:0,60,1576	0/0:17,0:17:51.16:0,51,1290	0/0:21,0:21:63.22:0,63,1719	0/0:30,0:30:87.27:0,87,2238	0/0:20,0:20:60.21:0,60,1593	0/0:20,0:20:57.16:0,57,1058	0/0:21,0:21:63.20:0,63,1607	0/0:9,0:9:27.09:0,27,475
chr10	84832410	.	A	AGGAT	9663.28	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-4.408;DP=582;FS=31.165;HRun=0;HaplotypeScore=120.7579;InbreedingCoeff=0.9991;MQ=88.55;MQ0=0;MQRankSum=-9.229;QD=57.52;ReadPosRankSum=3.491;VQSLOD=3.6232;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:35.90:936,36,0	1/1:2,4:7:21.03:482,21,0	0/0:28,0:28:72.23:0,72,1280	0/0:20,0:20:37.39:0,37,707	0/0:27,0:27:66.23:0,66,1229	1/1:25,0:25:54.18:1024,54,0	0/0:22,0:22:60.21:0,60,1113	0/0:33,0:33:81.23:0,81,1435	0/0:20,0:20:48.16:0,48,890	1/1:1,18:19:57.20:1516,57,0	1/1:0,17:18:42.14:1094,42,0	0/0:15,0:15:42.14:0,42,783	0/0:18,0:18:54.17:0,54,977	0/0:14,0:14:36.12:0,36,662	0/0:23,0:23:63.22:0,63,1164	1/1:0,15:16:36.12:959,36,0	1/1:3,28:34:81.28:2144,81,0	0/0:22,0:22:66.19:0,66,1164	0/0:19,0:18:48.16:0,48,859	0/0:24,0:24:72.18:0,72,1270	0/0:22,0:22:60.16:0,60,1067	0/0:16,0:16:48.10:0,48,828	0/0:22,0:22:63.20:0,63,1139	0/0:28,0:28:81.23:0,81,1475	0/0:20,0:20:57.14:0,57,1022	1/1:18,1:20:51.65:979,52,0	0/0:21,0:21:60.13:0,60,1041	1/1:9,0:9:27.09:530,27,0
chr10	84832411	.	G	GGATT	9347.96	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-0.184;DP=589;FS=32.204;HRun=0;HaplotypeScore=123.6787;InbreedingCoeff=0.9984;MQ=87.09;MQ0=0;MQRankSum=-8.365;QD=53.11;ReadPosRankSum=3.189;VQSLOD=3.4236;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,6:25:51.17:1275,51,0	1/1:7,0:7:18.06:333,18,0	0/0:27,0:27:72.21:0,72,1274	0/0:19,0:19:27:0,27,731	0/0:27,0:27:69.23:0,69,1257	1/1:4,21:25:63.22:1581,63,0	0/0:21,0:21:60.21:0,60,1120	0/0:33,0:33:84.26:0,84,1447	0/0:20,0:20:48.16:0,48,867	1/1:19,0:19:57.20:1060,57,0	1/1:18,0:18:42.14:769,42,0	0/0:15,0:15:42.14:0,42,784	0/0:19,0:19:54.18:0,54,980	0/0:13,0:13:36.12:0,36,672	0/0:23,0:23:63.20:0,63,1144	1/1:16,0:16:36.12:676,36,0	1/1:36,0:36:81.28:1537,81,0	0/0:23,0:23:63.22:0,63,1155	0/0:19,0:18:54.18:0,54,975	0/0:24,0:24:72.21:0,72,1268	0/0:22,0:22:60.16:0,60,1065	0/0:16,0:16:48.16:0,48,852	0/0:22,0:22:63.22:0,63,1159	0/0:29,0:29:81.28:0,81,1499	0/0:20,0:20:57.19:0,57,1046	1/1:3,17:21:57.15:1397,57,0	0/0:21,0:21:63.17:0,63,1081	1/1:0,9:9:27.09:719,27,0
chr10	84832528	.	C	CG	2419.88	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=13.106;DP=403;FS=0.895;HRun=1;HaplotypeScore=78.1989;InbreedingCoeff=0.8606;MQ=52.10;MQ0=12;MQRankSum=-8.613;QD=11.36;ReadPosRankSum=-4.224;VQSLOD=0.3140;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,12:20:15.57:130,16,0	1/1:4,1:4:5.99:50,6,0	0/0:6,0:2:6.02:0,6,64	0/0:7,0:3:2.92:0,3,17	0/0:14,0:14:36.04:0,36,403	1/1:10,0:10:17.45:103,17,0	1/1:18,0:17:28.64:178,29,0	1/1:29,0:29:53.80:352,54,0	0/0:24,0:24:66.15:0,66,803	1/1:5,6:11:26.75:230,27,0	1/1:1,2:3:2.95:22,3,0	0/0:20,0:20:54.16:0,54,685	0/0:11,0:11:27.03:0,27,317	0/0:13,0:13:36.05:0,36,432	0/0:14,0:14:41.72:0,42,503	1/1:7,13:20:45.06:471,45,0	1/1:16,8:24:16.37:324,16,0	0/0:28,0:28:69.19:0,69,869	1/1:12,0:12:2.96:117,3,0	1/1:9,0:8:17.14:120,17,0	1/1:8,0:8:14.45:98,14,0	1/1:5,0:5:4.98:35,5,0	0/0:20,0:20:54.17:0,54,696	0/0:31,0:31:90.16:0,90,1115	1/1:10,0:9:16.41:104,16,0	1/1:10,0:9:23.45:109,23,0	1/1:13,0:13:17.66:125,18,0	1/1:6,0:6:11.51:64,12,0
chr10	84832534	.	AAAG	A	1637.54	PASS	AB=0.997;AC=24;AF=0.429;AN=56;BaseQRankSum=6.725;DP=445;FS=2.544;HRun=0;HaplotypeScore=95.4475;InbreedingCoeff=0.2582;MQ=56.98;MQ0=8;MQRankSum=-3.336;QD=6.47;ReadPosRankSum=-6.639;VQSLOD=0.3775;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:1.74:2,0,193	0/1:8,0:7:6.93:7,0,39	0/0:9,0:4:7.45:0,7,108	0/0:9,0:5:8.87:0,9,82	0/0:12,0:12:30.06:0,30,507	1/1:0,10:10:21.01:287,21,0	1/1:17,0:17:21.72:176,22,0	0/1:27,1:28:45.07:106,0,45	0/0:24,0:24:69.14:0,69,1150	0/1:16,0:16:36.18:36,0,80	1/1:7,0:7:0.65:49,1,0	0/0:21,0:21:58.87:0,59,1008	0/0:11,0:11:33.09:0,33,566	0/0:13,0:13:39.12:0,39,696	0/0:12,0:12:36.01:0,36,570	0/1:20,0:20:4.82:5,0,86	0/1:24,0:24:56.41:56,0,79	0/0:28,0:28:81.03:0,81,1194	1/1:16,0:16:1.89:98,2,0	0/1:14,0:13:5.19:133,0,5	1/1:10,0:10:6.18:88,6,0	0/1:9,0:9:15.10:53,0,15	0/0:20,0:20:60.19:0,60,1098	0/0:33,0:33:96.30:0,96,1753	0/1:14,0:13:40.72:60,0,41	1/1:12,3:14:41.92:458,42,0	0/1:15,0:15:5.02:10,0,5	1/1:0,6:6:12.04:195,12,0
chr10	84832535	.	AAG	A	2785.31	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=10.153;DP=451;FS=0.837;HRun=0;HaplotypeScore=85.7130;InbreedingCoeff=0.8285;MQ=57.58;MQ0=8;MQRankSum=-7.838;QD=10.88;ReadPosRankSum=-5.186;VQSLOD=2.2138;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:23:23,0,50	0/1:8,0:7:2.52:20,0,3	0/0:9,0:4:7.43:0,7,87	0/0:10,0:6:11.87:0,12,101	0/0:11,0:11:30.02:0,30,393	1/1:10,0:10:20.98:195,21,0	1/1:4,12:16:24:268,24,0	1/1:26,1:27:27.26:338,27,0	0/0:24,0:24:67.39:0,67,899	1/1:16,0:16:10.48:104,10,0	1/1:7,0:7:15.43:93,15,0	0/0:21,0:21:38.30:0,38,787	0/0:11,0:11:33.07:0,33,445	0/0:14,0:14:42.10:0,42,574	0/0:13,0:13:38.62:0,39,474	1/1:20,0:20:26.62:115,27,0	1/1:24,0:24:16.78:119,17,0	0/0:28,0:28:81.02:0,81,983	1/1:15,1:16:39.07:325,39,0	1/1:14,1:14:24.22:271,24,0	1/1:9,2:11:24.80:209,25,0	1/1:9,0:9:12.85:141,13,0	0/0:21,0:21:63.17:0,63,889	0/0:33,0:33:96.27:0,96,1382	1/1:14,0:13:7.68:144,8,0	1/1:18,0:17:50.90:449,51,0	1/1:15,0:15:9.79:66,10,0	1/1:6,0:6:12.03:123,12,0
chr10	84832536	.	AG	A	4303.29	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=10.889;DP=454;FS=2.778;HRun=1;HaplotypeScore=74.1445;InbreedingCoeff=0.9733;MQ=58.96;MQ0=8;MQRankSum=-7.753;QD=16.81;ReadPosRankSum=-4.998;VQSLOD=3.4562;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:25.43:146,25,0	1/1:8,0:7:12.92:68,13,0	0/0:10,0:5:10.26:0,10,92	0/0:10,0:6:11.86:0,12,94	0/0:12,0:12:29.84:0,30,298	1/1:10,0:10:20.92:165,21,0	1/1:13,3:16:24.02:255,24,0	1/1:16,10:26:57.98:518,58,0	0/0:24,0:24:49.40:0,49,665	1/1:16,0:16:37.52:248,38,0	1/1:7,0:7:17.73:118,18,0	0/0:21,0:21:38.12:0,38,602	0/0:12,0:12:35.42:0,35,354	0/0:14,0:14:42.08:0,42,452	0/0:13,0:13:35.39:0,35,363	1/1:20,0:20:49.44:305,49,0	1/1:23,0:23:44.33:247,44,0	0/0:28,0:28:80.95:0,81,789	1/1:1,15:16:44.89:407,45,0	1/1:10,6:15:40.20:390,40,0	1/1:7,4:11:26.95:265,27,0	1/1:6,3:9:22.59:237,23,0	0/0:21,0:21:63.13:0,63,689	0/0:33,0:33:93.21:0,93,1041	1/1:13,2:14:32.18:281,32,0	1/1:17,1:17:50.80:409,51,0	1/1:0,15:15:12:143,12,0	1/1:6,0:6:11.99:100,12,0
chr10	84832543	.	A	AT	1171.54	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.937;DP=478;FS=7.073;HRun=0;HaplotypeScore=87.6292;InbreedingCoeff=0.9623;MQ=62.27;MQ0=6;MQRankSum=-5.335;QD=15.62;ReadPosRankSum=1.034;VQSLOD=5.1680;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:46:0,46,363	1/1:1,7:7:14.83:120,15,0	0/0:11,0:7:11:0,11,173	0/0:10,0:7:11.89:0,12,166	0/0:15,0:15:42.05:0,42,502	0/0:12,0:12:26.89:0,27,221	0/0:18,0:18:29.96:0,30,261	0/0:30,0:30:72.79:0,73,618	0/0:21,0:21:54:0,54,776	1/1:9,7:16:12.09:314,12,0	1/1:5,4:9:22.78:143,23,0	0/0:21,0:21:57.99:0,58,710	0/0:13,0:13:38.93:0,39,470	0/0:15,0:15:45.14:0,45,613	0/0:15,0:15:42.05:0,42,502	1/1:8,10:20:32.01:458,32,0	1/1:11,11:22:20.60:308,21,0	0/0:23,0:23:63.17:0,63,841	0/0:18,0:18:50.69:0,51,402	0/0:16,0:15:38.02:0,38,302	0/0:11,0:11:26.91:0,27,221	0/0:9,0:9:24.03:0,24,230	0/0:23,0:23:69.09:0,69,890	0/0:35,0:35:99:0,102,1373	0/0:16,0:15:34.09:0,34,277	0/0:22,0:21:55.60:0,56,443	0/0:19,0:19:23.93:0,24,196	0/0:5,0:5:12.01:0,12,111
chr10	84832616	.	C	CTACA	4697.09	PASS	AB=0.955;AC=11;AF=0.196;AN=56;BaseQRankSum=-3.755;DP=562;FS=6.594;HRun=0;HaplotypeScore=107.5431;InbreedingCoeff=0.8614;MQ=80.90;MQ0=0;MQRankSum=-5.312;QD=44.73;ReadPosRankSum=2.451;VQSLOD=5.3521;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,114,2099	1/1:4,2:6:6.02:160,6,0	0/0:32,0:32:81.11:0,81,1445	0/0:19,0:19:47.28:0,47,875	0/0:22,0:22:66.19:0,66,1130	0/0:19,0:19:51.17:0,51,951	0/0:14,0:14:36.12:0,36,671	0/0:21,0:21:54.18:0,54,986	0/0:18,0:18:51.17:0,51,951	1/1:4,21:25:60.21:1584,60,0	1/1:4,13:17:36.12:958,36,0	0/0:25,0:25:72.21:0,72,1309	0/0:20,0:20:51.17:0,51,941	0/0:16,0:16:45.13:0,45,806	0/0:20,0:20:60.21:0,60,1119	1/1:2,14:18:39.13:1014,39,0	1/1:1,17:18:36.12:958,36,0	0/0:21,0:21:60.17:0,60,1054	0/0:15,0:15:42.11:0,42,714	0/0:26,0:26:72.25:0,72,1342	0/0:25,0:25:72.23:0,72,1311	0/0:11,0:11:24.08:0,24,448	0/0:17,0:17:45.15:0,45,832	0/0:29,0:29:81.26:0,81,1468	0/0:12,0:12:30.10:0,30,554	0/1:20,1:21:22.84:23,0,921	0/0:25,0:25:65.96:0,66,1223	0/0:7,0:7:21.07:0,21,383
chr10	84832783	.	A	ATGAG	22735.38	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-7.006;DP=661;FS=3.076;HRun=0;HaplotypeScore=113.2533;InbreedingCoeff=0.9946;MQ=86.91;MQ0=4;MQRankSum=-12.016;QD=57.70;ReadPosRankSum=-0.132;VQSLOD=5.9339;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,37:41:96.33:2479,96,0	1/1:1,4:4:12.04:311,12,0	0/0:28,0:28:66.21:0,66,1151	0/0:26,0:26:60.18:0,60,1007	0/0:31,0:31:84.29:0,84,1510	1/1:6,15:21:54.15:1270,54,0	0/0:11,0:11:24.08:0,24,431	1/1:10,18:28:75.24:1866,75,0	0/0:22,0:22:66.23:0,66,1186	1/1:5,23:29:75.24:1850,75,0	1/1:2,23:25:60.21:1529,60,0	0/0:28,0:28:78.27:0,78,1402	0/0:22,0:22:63.22:0,63,1132	0/0:26,0:26:78.27:0,78,1396	0/0:18,0:18:51.16:0,51,884	1/1:7,26:30:24.30:1781,24,0	1/1:8,9:17:39.11:949,39,0	0/0:12,0:12:36.11:0,36,620	1/1:10,19:29:63.22:1555,63,0	1/1:0,14:14:42.14:1090,42,0	1/1:13,28:41:60.18:1445,60,0	1/1:4,14:17:39.13:1012,39,0	0/0:24,0:24:72.23:0,72,1264	0/0:19,0:19:51.17:0,51,917	1/1:7,13:20:45.15:1151,45,0	1/1:4,22:25:69.24:1752,69,0	1/1:9,22:31:87.28:2153,87,0	1/1:5,9:13:21.07:541,21,0
chr10	84832837	.	T	TTTAC	17395.35	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-3.244;DP=595;FS=5.268;HRun=0;HaplotypeScore=109.0466;InbreedingCoeff=0.9842;MQ=81.80;MQ0=0;MQRankSum=-12.577;QD=57.79;ReadPosRankSum=-0.702;VQSLOD=6.3349;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1910	1/1:2,2:3:6.02:161,6,0	0/0:24,0:24:56.50:0,57,965	0/0:20,0:20:50.27:0,50,953	0/0:26,0:26:75.13:0,75,1348	1/1:3,16:19:48.10:1204,48,0	0/0:23,0:23:66.20:0,66,1180	1/1:21,19:37:99:2266,102,0	0/0:17,0:17:48.09:0,48,802	1/1:9,17:25:60.13:1414,60,0	1/1:4,9:13:36:791,36,0	0/0:34,0:34:99:0,99,1805	0/0:16,0:16:48.13:0,48,838	0/0:20,0:20:57.17:0,57,1047	0/0:18,0:18:51.16:0,51,936	1/1:4,9:13:35.97:787,36,0	1/1:1,20:23:51.17:1373,51,0	0/0:15,0:15:45.13:0,45,820	1/1:5,20:28:75.21:1831,75,0	1/1:3,15:20:39.13:980,39,0	1/1:5,15:20:54.15:1114,54,0	1/1:4,5:9:24.07:516,24,0	0/0:21,0:21:57.14:0,57,954	0/0:22,0:22:66.23:0,66,1252	1/1:4,14:18:45.05:914,45,0	1/1:5,23:28:81.14:1855,81,0	1/1:6,21:30:71.84:1707,72,0	1/1:0,7:6:18.06:482,18,0
chr10	84833098	.	G	GT	1906.29	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.994;DP=392;FS=10.462;HRun=8;HaplotypeScore=57.7765;InbreedingCoeff=0.9151;MQ=72.09;MQ0=0;MQRankSum=-8.448;QD=24.76;ReadPosRankSum=-1.283;VQSLOD=3.4068;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:30.02:0,30,274	1/1:1,10:11:30.09:345,30,0	0/0:10,0:10:20.68:0,21,179	0/0:6,0:6:12.53:0,13,128	0/0:28,0:28:72.03:0,72,658	0/0:17,0:17:45.02:0,45,412	0/0:6,0:6:12:0,12,110	0/0:27,0:28:74.06:0,74,660	0/0:17,0:17:47.98:0,48,431	1/1:2,20:22:60.18:692,60,0	1/1:7,15:22:39.07:435,39,0	0/0:9,0:9:24:0,24,216	0/0:11,0:11:24:0,24,220	0/0:9,0:9:24.01:0,24,220	0/0:19,0:19:54.03:0,54,494	1/1:1,8:9:24.03:262,24,0	1/1:4,9:13:30.09:346,30,0	0/0:12,0:12:36.02:0,36,329	0/0:17,0:17:42.02:0,42,382	0/0:13,0:13:30.01:0,30,275	0/0:3,0:3:6:0,6,55	0/0:2,0:2:2.99:0,3,27	0/0:12,0:12:33:0,33,296	0/0:4,0:4:12.01:0,12,110	0/0:16,0:16:35.97:0,36,321	0/0:29,0:29:74.98:0,75,675	0/0:21,0:21:48.02:0,48,439	0/0:12,0:12:30.01:0,30,275
chr10	84833112	.	TTA	T	2339.26	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.970;DP=363;FS=10.280;HRun=0;HaplotypeScore=64.2598;InbreedingCoeff=0.9033;MQ=73.19;MQ0=0;MQRankSum=-11.572;QD=31.61;ReadPosRankSum=-0.867;VQSLOD=4.9124;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:36.12:0,36,625	1/1:1,10:11:30.07:387,30,0	0/0:9,0:9:18.01:0,18,220	0/0:7,0:7:11.16:0,11,164	0/0:23,0:23:66.23:0,66,1143	0/0:16,0:16:45.12:0,45,733	0/0:4,0:4:12.04:0,12,210	0/0:28,0:28:72.25:0,72,1245	0/0:15,0:15:42.14:0,42,736	1/1:3,22:25:69.23:931,69,0	1/1:1,17:18:48.03:586,48,0	0/0:7,0:7:21.07:0,21,368	0/0:10,0:10:30.10:0,30,525	0/0:9,0:9:24.08:0,24,421	0/0:19,0:19:54.17:0,54,918	1/1:3,5:8:15.05:203,15,0	1/1:2,10:12:30.10:405,30,0	0/0:13,0:13:39.13:0,39,671	0/0:16,0:16:48.16:0,48,816	0/0:13,0:13:39.13:0,39,684	0/0:2,0:2:6.02:0,6,105	0/0:1,0:1:3.01:0,3,52	0/0:11,0:11:30.10:0,30,518	0/0:3,0:3:9.03:0,9,158	0/0:14,0:14:30.10:0,30,525	0/0:25,0:25:66.23:0,66,1157	0/0:18,0:18:48.16:0,48,836	0/0:10,0:10:24.08:0,24,421
chr10	84833130	.	G	GT	2663.28	PASS	AB=0.929;AC=26;AF=0.481;AN=54;BaseQRankSum=6.676;DP=371;FS=2.021;HRun=11;HaplotypeScore=60.4420;InbreedingCoeff=0.7750;MQ=68.47;MQ0=0;MQRankSum=-1.787;QD=13.12;ReadPosRankSum=-1.911;VQSLOD=3.1943;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:45.09:457,45,0	1/1:1,8:9:23.98:231,24,0	0/0:8,0:6:4.72:0,5,22	0/1:5,1:6:6.27:10,0,6	0/0:16,0:18:44.30:0,44,329	0/0:19,0:19:50.28:0,50,376	0/0:4,0:4:11.94:0,12,90	1/1:11,0:31:63.88:361,64,0	0/0:17,0:17:41.81:0,42,325	1/1:6,19:25:48.38:558,48,0	1/1:5,10:15:9.76:267,10,0	0/0:8,0:8:14.92:0,15,113	0/0:7,0:7:20.92:0,21,163	0/1:8,0:8:6.55:7,0,135	0/0:19,0:19:47.78:0,48,369	1/1:4,1:4:3.01:30,3,0	1/1:5,9:14:13.42:230,13,0	0/0:14,0:14:35.43:0,35,262	1/1:8,0:16:25.68:133,26,0	1/1:2,2:13:31.82:200,32,0	1/1:3,0:3:2.97:20,3,0	./.	0/0:11,0:11:24.78:0,25,187	0/0:3,0:3:8.97:0,9,70	1/1:3,9:12:18.04:183,18,0	0/0:23,1:25:6.89:0,7,352	1/1:8,1:21:34.67:184,35,0	0/0:12,0:12:32.73:0,33,239
chr10	84833675	.	T	TC	1584.64	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.440;DP=532;FS=35.523;HRun=4;HaplotypeScore=58.2666;InbreedingCoeff=0.9951;MQ=89.05;MQ0=0;MQRankSum=-2.035;QD=24.38;ReadPosRankSum=0.876;VQSLOD=1.4264;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,108,1211	1/1:1,5:6:17.85:216,18,0	0/0:26,0:26:51.50:0,52,609	0/0:17,0:17:18.49:0,18,346	0/0:26,0:26:75.17:0,75,829	0/0:18,0:18:51.14:0,51,578	0/0:21,0:21:60.11:0,60,647	0/0:19,0:19:48.03:0,48,492	0/0:22,0:22:57.16:0,57,646	1/1:7,10:17:32.58:416,33,0	1/1:1,10:11:30.10:408,30,0	0/0:19,0:19:51.11:0,51,555	0/0:16,0:16:48.14:0,48,544	0/0:17,0:17:42.10:0,42,467	0/0:26,0:26:69.18:0,69,769	1/1:4,8:12:27.04:334,27,0	1/1:4,15:19:30.05:385,30,0	0/0:24,0:24:66.19:0,66,748	0/0:12,0:12:27.08:0,27,306	0/0:12,0:12:33.09:0,33,372	0/0:31,0:31:84.21:0,84,933	0/0:11,0:11:27.06:0,27,296	0/0:21,0:21:57.14:0,57,625	0/0:10,0:10:30.07:0,30,331	0/0:19,0:19:51.12:0,51,567	0/0:21,0:21:57.16:0,57,642	0/0:20,0:20:48.10:0,48,522	0/0:17,0:17:36.09:0,36,403
chr10	84834083	.	GA	G	1474.91	PASS	AB=0.666;AC=14;AF=0.250;AN=56;BaseQRankSum=8.489;DP=526;FS=3.727;HRun=13;HaplotypeScore=69.6069;InbreedingCoeff=0.5874;MQ=63.85;MQ0=11;MQRankSum=0.176;QD=7.30;ReadPosRankSum=6.349;VQSLOD=2.5239;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:36:46.82:137,47,0	0/1:3,5:8:14.23:73,0,14	0/0:15,0:9:0.85:0,1,55	0/0:11,0:9:17:0,17,111	0/0:24,0:28:44.98:0,45,373	0/0:12,0:14:8.86:0,9,250	1/1:4,9:14:22.91:159,23,0	0/0:13,0:12:27.03:0,27,257	0/0:19,0:20:38.04:0,38,378	0/1:9,17:26:5.70:276,0,6	1/1:11,19:29:31.84:365,32,0	0/0:10,0:11:26.85:0,27,233	0/0:11,0:11:18.01:0,18,165	0/0:19,0:18:35.98:0,36,327	0/0:17,1:19:19.99:0,20,343	1/1:4,14:17:6.62:211,7,0	0/1:6,25:30:18.90:369,0,19	0/0:22,1:24:41.83:0,42,518	0/0:14,1:12:17.97:0,18,161	0/0:10,0:10:18.03:0,18,175	0/0:19,2:20:10.21:0,10,408	0/0:10,0:10:18.03:0,18,175	0/0:28,0:28:51.07:0,51,487	0/0:23,0:23:49.32:0,49,470	1/1:3,0:21:20.13:59,20,0	0/0:17,1:17:14.15:0,14,295	0/1:15,2:17:0.51:1,0,304	0/0:10,0:9:6.01:0,6,58
chr10	84834263	.	TGA	T	3996.41	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.058;DP=551;FS=7.614;HRun=0;HaplotypeScore=73.2252;InbreedingCoeff=0.9978;MQ=86.00;MQ0=0;MQRankSum=-2.668;QD=38.80;ReadPosRankSum=2.245;VQSLOD=5.5795;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,2189	1/1:0,8:8:24.08:344,24,0	0/0:19,0:19:51.17:0,51,877	0/0:27,0:27:70.18:0,70,1236	0/0:25,0:25:72.25:0,72,1319	0/0:15,0:15:45.15:0,45,808	0/0:18,0:18:51.16:0,51,889	0/0:23,0:23:66.21:0,66,1152	0/0:16,0:16:45.15:0,45,817	1/1:0,26:26:78.26:1117,78,0	1/1:0,17:17:33.11:472,33,0	0/0:22,0:22:66.23:0,66,1197	0/0:13,0:13:36.12:0,36,654	0/0:28,0:28:78.27:0,78,1416	0/0:21,0:21:63.22:0,63,1155	1/1:0,26:26:75.25:1075,75,0	1/1:3,23:26:69.23:989,69,0	0/0:16,0:16:45.15:0,45,825	0/0:14,0:14:39.13:0,39,715	0/0:19,0:19:57.20:0,57,1039	0/0:12,0:12:27.08:0,27,464	0/0:20,0:20:48.16:0,48,880	0/0:19,0:19:54.16:0,54,924	0/0:15,0:15:45.15:0,45,825	0/0:18,0:18:54.19:0,54,982	0/0:20,1:21:20.21:0,20,1058	0/0:17,0:17:51.17:0,51,933	0/0:9,0:9:27.09:0,27,495
chr10	84834597	.	AT	A	3010.79	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.450;DP=632;FS=5.862;HRun=4;HaplotypeScore=78.0919;InbreedingCoeff=0.9987;MQ=81.66;MQ0=0;MQRankSum=-12.011;QD=32.03;ReadPosRankSum=-0.990;VQSLOD=3.7182;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.26:0,78,1092	1/1:1,9:10:30.08:348,30,0	0/0:26,0:26:78.25:0,78,1061	0/0:18,0:17:45.12:0,45,609	0/0:34,0:34:99:0,102,1423	0/0:23,0:23:63.21:0,63,882	0/0:17,0:17:48.15:0,48,657	0/0:21,0:21:60.20:0,60,840	0/0:30,0:30:87.29:0,87,1217	1/1:2,24:26:75.22:888,75,0	1/1:1,29:30:87.27:1042,87,0	0/0:23,0:23:66.20:0,66,905	0/0:18,0:18:51.17:0,51,714	0/0:20,0:20:60.19:0,60,823	0/0:23,0:23:66.22:0,66,924	1/1:2,15:17:51.13:588,51,0	1/1:3,8:11:27.08:320,27,0	0/0:29,0:29:81.27:0,81,1134	0/0:17,0:17:51.17:0,51,714	0/0:27,0:27:81.26:0,81,1117	0/0:17,0:17:51.16:0,51,698	0/0:16,0:16:39.12:0,39,528	0/0:14,0:14:42.13:0,42,572	0/0:24,0:24:66.22:0,66,924	0/0:29,0:29:84.27:0,84,1158	0/0:29,2:31:21.37:0,21,1146	0/0:42,0:42:99:0,126,1747	0/0:12,0:12:33.11:0,33,461
chr10	84834613	.	G	GTAT	5641.58	PASS	AB=0.939;AC=11;AF=0.196;AN=56;BaseQRankSum=14.291;DP=646;FS=0.407;HRun=0;HaplotypeScore=102.7432;InbreedingCoeff=0.8716;MQ=72.02;MQ0=2;MQRankSum=-13.428;QD=40.88;ReadPosRankSum=-1.969;VQSLOD=5.2190;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.18:0,81,1266	1/1:3,8:12:33.09:664,33,0	0/0:23,0:21:60.19:0,60,945	0/0:19,0:13:30.10:0,30,489	0/0:37,0:37:99:0,102,1668	0/0:21,0:21:57.18:0,57,921	0/0:19,0:19:57.18:0,57,914	0/0:24,0:23:63.21:0,63,1028	0/0:28,0:28:78.25:0,78,1274	1/1:7,21:27:72.23:1533,72,0	1/1:7,28:34:90.26:1848,90,0	0/0:20,0:20:60.21:0,60,994	0/0:18,0:18:54.18:0,54,897	0/0:20,0:20:57.18:0,57,924	0/0:27,0:27:78.26:0,78,1272	1/1:3,15:18:49.05:1081,49,0	1/1:7,7:14:8.56:470,9,0	0/0:27,0:27:78.23:0,78,1257	0/0:15,0:14:39.12:0,39,625	0/0:28,0:28:84.29:0,84,1399	0/0:16,0:16:45.15:0,45,747	0/0:16,0:16:45.15:0,45,750	0/0:15,0:15:42.14:0,42,700	0/0:22,0:22:63.17:0,63,1011	0/0:28,0:28:78.23:0,78,1247	0/1:29,2:31:45.43:45,0,1284	0/0:46,0:46:99:0,138,2262	0/0:9,0:9:27.09:0,27,450
chr10	84834653	.	T	TA	2268.70	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=2.359;DP=630;FS=0.000;HRun=10;HaplotypeScore=79.2552;InbreedingCoeff=0.9703;MQ=58.73;MQ0=4;MQRankSum=-4.837;QD=21.81;ReadPosRankSum=-0.867;VQSLOD=3.9953;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:77.74:0,78,640	1/1:5,10:15:27.07:288,27,0	0/0:7,0:7:10.84:0,11,92	0/0:13,0:9:14.90:0,15,116	0/0:28,0:28:59.62:0,60,486	0/0:20,0:20:56.93:0,57,468	0/0:21,0:21:59.92:0,60,493	0/0:41,1:40:69.84:0,70,772	0/0:19,0:19:47.93:0,48,394	1/1:10,19:29:42.51:601,43,0	1/1:3,18:20:51.09:531,51,0	0/0:25,0:25:56.06:0,56,466	0/0:16,0:16:32.94:0,33,271	0/0:16,0:16:41.95:0,42,345	0/0:23,0:23:53.90:0,54,443	1/1:2,15:17:42.11:448,42,0	1/1:3,18:21:54.14:576,54,0	0/0:27,0:26:48.34:0,48,390	0/0:17,0:16:41.94:0,42,345	0/0:33,0:33:62.73:0,63,665	0/0:19,0:19:50.92:0,51,418	0/0:22,0:22:56.91:0,57,465	0/0:15,0:15:35.96:0,36,295	0/0:20,0:20:50.93:0,51,416	0/0:19,0:19:47.94:0,48,394	0/0:29,3:32:7.96:0,8,478	0/0:39,0:39:99:0,102,834	0/0:19,0:18:44.94:0,45,369
chr10	84834800	.	CTT	C	1980.86	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.933;DP=618;FS=0.584;HRun=2;HaplotypeScore=70.8940;InbreedingCoeff=0.9558;MQ=55.96;MQ0=9;MQRankSum=3.922;QD=38.84;ReadPosRankSum=2.651;VQSLOD=3.6851;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:78.27:1271,78,0	0/0:12,0:12:36.06:0,36,633	0/0:10,0:3:9.03:0,9,164	0/0:9,0:4:12.03:0,12,181	0/0:24,0:24:64.34:0,64,1160	0/0:17,0:17:48.16:0,48,975	0/0:23,0:23:69.22:0,69,1355	0/0:29,0:28:84.22:0,84,1550	0/0:24,0:24:72.23:0,72,1414	0/0:13,0:13:39.13:0,39,792	0/0:19,0:18:54.13:0,54,1018	0/0:17,0:17:51.18:0,51,1036	0/0:20,0:20:60.18:0,60,1147	0/0:20,0:20:60.17:0,60,1178	0/0:23,0:23:69.22:0,69,1353	0/0:24,0:24:72.23:0,72,1391	0/0:30,0:30:90.27:0,90,1739	0/0:28,0:27:81.26:0,81,1605	0/0:27,0:20:60.21:0,60,1218	0/0:28,0:28:84.29:0,84,1683	0/0:37,0:37:99:0,108,2157	0/0:16,0:16:48.15:0,48,931	0/0:21,0:21:63.22:0,63,1280	0/0:27,0:27:75.26:0,75,1495	1/1:0,19:19:51.17:832,51,0	0/0:22,0:22:66.22:0,66,1307	0/0:33,0:33:99:0,99,1962	0/0:14,0:14:42.14:0,42,853
chr10	84835106	.	T	TCTC	3675.77	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.849;DP=633;FS=27.237;HRun=0;HaplotypeScore=108.0307;InbreedingCoeff=0.9982;MQ=86.88;MQ0=0;MQRankSum=-10.661;QD=44.83;ReadPosRankSum=-0.753;VQSLOD=2.1321;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1736	1/1:5,6:11:30.06:567,30,0	0/0:29,0:29:72.24:0,72,1125	0/0:18,0:18:36.11:0,36,542	0/0:24,0:24:60.20:0,60,948	0/0:22,0:22:63.20:0,63,973	0/0:25,0:25:72.22:0,72,1097	0/0:28,0:28:72.22:0,72,1074	0/0:17,0:17:51.17:0,51,809	1/1:10,12:22:51.15:973,51,0	1/1:3,9:12:24.08:489,24,0	0/0:26,0:26:75.19:0,75,1096	0/0:26,0:26:66.21:0,66,1023	0/0:15,0:15:42.14:0,42,660	0/0:34,0:34:87.28:0,87,1354	1/1:5,14:19:42.14:903,42,0	1/1:8,10:18:28.02:745,28,0	0/0:17,0:17:48.14:0,48,735	0/0:21,0:21:57.17:0,57,864	0/0:28,0:28:69.24:0,69,1093	0/0:34,0:34:99:0,102,1614	0/0:25,0:25:69.22:0,69,1067	0/0:18,0:18:51.16:0,51,783	0/0:31,0:31:84.26:0,84,1304	0/0:7,0:7:21.07:0,21,333	0/0:28,0:28:81.27:0,81,1261	0/0:25,0:25:72.22:0,72,1092	0/0:14,0:14:39.13:0,39,618
chr10	84835115	.	C	CGGTG	5415.44	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.435;DP=636;FS=34.263;HRun=0;HaplotypeScore=130.1813;InbreedingCoeff=0.9442;MQ=86.11;MQ0=0;MQRankSum=-13.177;QD=72.21;ReadPosRankSum=-0.741;VQSLOD=3.1259;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,2414	1/1:1,8:9:27.09:755,27,0	0/0:29,0:29:87.30:0,87,1727	0/0:18,0:18:45.15:0,45,853	0/0:25,0:25:63.22:0,63,1319	0/0:24,0:24:69.24:0,69,1433	0/0:25,0:25:75.26:0,75,1560	0/0:28,0:28:78.27:0,78,1636	0/0:20,0:20:60.21:0,60,1243	1/1:4,13:17:42.14:1209,42,0	1/1:4,9:13:30.09:778,30,0	0/0:24,0:24:72.25:0,72,1510	0/0:27,0:27:81.28:0,81,1699	0/0:13,0:13:39.13:0,39,818	0/0:29,0:29:87.30:0,87,1825	1/1:8,14:22:57.20:1589,57,0	1/1:2,12:14:39.13:1085,39,0	0/0:20,0:20:57.18:0,57,1155	0/0:24,0:24:72.24:0,72,1473	0/0:24,0:24:72.23:0,72,1469	0/0:38,0:38:99:0,108,2239	0/0:25,0:25:72.25:0,72,1494	0/0:22,0:22:66.20:0,66,1307	0/0:32,0:32:90.29:0,90,1836	0/0:9,0:9:27.09:0,27,566	0/0:29,0:29:0.52:0,1,1639	0/0:22,0:22:66.21:0,66,1346	0/0:15,0:15:45.15:0,45,916
chr10	84835156	.	G	GGCTTACACCGATCCTTATTGA	20413.99	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=9.005;DP=682;FS=9.839;HRun=0;HaplotypeScore=381.2468;InbreedingCoeff=0.8854;MQ=85.46;MQ0=0;MQRankSum=-14.847;QD=168.71;ReadPosRankSum=1.915;VQSLOD=3.6647;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:99:0,150,7512	1/1:4,4:8:24.08:2209,24,0	0/0:26,0:26:68.95:0,69,2546	0/0:27,0:26:71.42:0,71,2725	0/0:25,0:25:69.24:0,69,3605	0/0:25,0:25:69.24:0,69,3576	0/0:23,0:23:66.23:0,66,3192	0/0:32,0:32:90.30:0,90,4204	0/0:22,0:22:60.21:0,60,2984	1/1:17,4:21:63.22:5120,63,0	1/1:11,4:15:36.08:2514,36,0	0/0:26,0:26:72.25:0,72,4174	0/0:33,0:33:93.32:0,93,5056	0/0:20,0:20:60.21:0,60,3363	0/0:34,0:34:99:0,102,4904	1/1:28,8:36:99:7777,99,0	1/1:14,2:16:31.66:2633,32,0	0/0:17,0:17:51.18:0,51,2719	0/0:26,0:26:75.25:0,75,3834	0/0:24,0:24:63.18:0,63,3297	0/0:33,0:33:99:0,99,5046	0/0:24,0:24:60.21:0,60,3387	0/0:25,0:25:72.22:0,72,3557	0/0:25,0:25:75.26:0,75,4212	0/0:11,0:11:30.10:0,30,1455	0/1:25,0:25:99:161,0,3736	0/0:26,0:26:75.24:0,75,3810	0/0:7,0:7:21.07:0,21,1162
chr10	84835161	.	T	TGAG	2095.75	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.687;DP=650;FS=10.418;HRun=0;HaplotypeScore=114.9156;InbreedingCoeff=0.9845;MQ=88.06;MQ0=0;MQRankSum=-9.780;QD=30.37;ReadPosRankSum=1.912;VQSLOD=3.9556;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:99:0,138,2254	1/1:2,5:7:15.05:304,15,0	0/0:29,0:29:69.21:0,69,1073	0/0:25,0:24:63.16:0,63,992	0/0:23,0:23:60.20:0,60,980	0/0:23,0:23:60.17:0,60,949	0/0:20,0:20:57.19:0,57,928	0/0:30,0:30:81.27:0,81,1298	0/0:20,0:20:57.19:0,57,931	1/1:1,13:16:42.13:882,42,0	1/1:2,11:13:15.01:286,15,0	0/0:25,0:25:72.23:0,72,1152	0/0:32,0:32:93.30:0,93,1494	0/0:22,0:22:63.20:0,63,997	0/0:37,0:37:99:0,99,1545	1/1:0,25:25:30.03:574,30,0	1/1:1,6:8:12.01:219,12,0	0/0:20,0:20:57.17:0,57,898	0/0:25,0:25:63.21:0,63,1029	0/0:24,0:24:63.20:0,63,1001	0/0:34,0:34:87.24:0,87,1344	0/0:24,0:24:63.21:0,63,1029	0/0:23,0:23:66.23:0,66,1078	0/0:26,0:26:78.27:0,78,1274	0/0:10,0:10:30.10:0,30,486	0/0:26,0:26:69.24:0,69,1124	0/0:25,0:25:69.24:0,69,1121	0/0:9,0:9:24.08:0,24,385
chr10	84835497	.	A	AGAAG	7400.32	PASS	AB=0.949;AC=11;AF=0.196;AN=56;BaseQRankSum=-11.613;DP=666;FS=0.398;HRun=0;HaplotypeScore=103.6995;InbreedingCoeff=0.8785;MQ=70.70;MQ0=0;MQRankSum=-2.238;QD=50.00;ReadPosRankSum=0.935;VQSLOD=5.7778;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,2200	1/1:1,7:9:18.06:459,18,0	0/0:23,0:20:26.01:0,26,735	0/0:22,0:20:48.53:0,49,855	0/0:27,0:27:72.24:0,72,1322	0/0:27,0:27:72.18:0,72,1285	0/0:15,0:15:45.13:0,45,762	0/0:31,0:31:81.24:0,81,1404	0/0:21,0:21:60.18:0,60,1074	1/1:2,23:26:75.25:1904,75,0	1/1:3,17:21:48.16:1244,48,0	0/0:13,0:13:39.12:0,39,709	0/0:23,0:23:69.24:0,69,1310	0/0:19,0:19:57.20:0,57,1079	0/0:27,0:27:81.26:0,81,1503	1/1:1,24:25:75.26:1980,75,0	1/1:6,23:30:66.23:1757,66,0	0/0:14,0:14:42.14:0,42,794	0/0:24,0:24:69.24:0,69,1293	0/0:31,0:31:90.29:0,90,1662	0/0:34,0:34:99:0,99,1826	0/0:21,0:21:57.20:0,57,1070	0/0:24,0:24:63.19:0,63,1127	0/0:31,0:30:93.28:0,93,1714	0/0:13,0:13:36.12:0,36,681	0/1:35,2:37:56.51:57,0,1681	0/0:31,0:31:87.30:0,87,1639	0/0:4,0:4:12.04:0,12,228
chr10	84836738	.	T	TC	649.23	PASS	AB=0.697;AC=11;AF=0.196;AN=56;BaseQRankSum=-5.842;DP=494;FS=0.000;HRun=11;HaplotypeScore=66.9517;InbreedingCoeff=0.3383;MQ=71.84;MQ0=0;MQRankSum=2.311;QD=4.70;ReadPosRankSum=-2.307;VQSLOD=0.5662;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,21:31:11.94:252,12,0	0/0:10,0:10:26.87:0,27,209	0/0:16,0:13:6.22:0,6,92	0/0:14,1:15:12.13:0,12,77	0/0:19,0:20:25.72:0,26,183	0/0:11,0:12:28.88:0,29,207	0/0:22,0:22:38.19:0,38,287	0/1:11,6:17:11.16:69,0,11	0/0:15,0:18:41.85:0,42,284	0/0:39,0:39:98.35:0,98,763	0/0:22,0:22:62.73:0,63,487	0/0:21,0:21:35.80:0,36,278	0/0:11,0:12:31.88:0,32,233	0/0:17,0:17:38.77:0,39,293	0/0:17,0:18:33.67:0,34,226	0/0:24,0:24:68.74:0,69,534	0/0:29,0:29:80.61:0,81,621	0/0:10,0:10:17.90:0,18,139	1/1:5,6:11:2:124,2,0	0/1:5,5:10:17.17:25,0,17	0/1:12,6:18:34.44:49,0,34	0/1:6,13:19:23.73:127,0,24	0/0:18,0:18:35.74:0,36,271	0/0:20,0:21:44.75:0,45,343	0/0:6,0:6:11.87:0,12,83	0/1:7,4:11:11.29:40,0,11	1/1:9,11:21:8.18:116,8,0	0/0:6,0:6:8.94:0,9,69
chr10	84837059	.	TA	T	10091.78	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=21.859;DP=716;FS=6.740;HRun=2;HaplotypeScore=131.0735;InbreedingCoeff=0.9663;MQ=86.17;MQ0=0;MQRankSum=-4.055;QD=33.98;ReadPosRankSum=2.468;VQSLOD=3.9343;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,1526	1/1:0,7:7:18.06:223,18,0	0/0:32,0:32:90.28:0,90,1301	0/0:20,0:20:57.15:0,57,803	0/0:26,0:26:75.25:0,75,1124	0/0:28,0:28:84.25:0,84,1216	1/1:1,26:27:75.24:929,75,0	1/1:1,26:27:75.24:927,75,0	0/0:20,0:20:60.20:0,60,898	1/1:2,32:34:99:1216,99,0	1/1:0,26:26:66.20:811,66,0	0/0:28,0:28:81.27:0,81,1214	0/0:28,0:28:84.26:0,84,1220	0/0:31,0:31:93.31:0,93,1392	0/0:33,0:33:99:0,99,1484	1/1:0,32:32:93.29:1151,93,0	1/1:1,19:20:54.17:669,54,0	0/0:24,0:24:69.23:0,69,1033	1/1:0,12:12:36.11:442,36,0	1/1:0,20:20:54.12:645,54,0	1/1:0,28:28:74.84:923,75,0	1/1:0,30:30:81.25:1004,81,0	0/0:23,0:23:69.23:0,69,1016	0/0:32,0:32:96.28:0,96,1414	0/0:18,0:18:54.18:0,54,809	0/0:23,2:25:0.91:0,1,956	1/1:1,33:34:93.29:1152,93,0	0/0:13,0:12:39.13:0,39,582
chr10	84837727	.	TA	T	3904.25	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.353;DP=610;FS=0.000;HRun=4;HaplotypeScore=56.7205;InbreedingCoeff=0.9993;MQ=84.60;MQ0=0;MQRankSum=-2.901;QD=30.50;ReadPosRankSum=-2.638;VQSLOD=2.4814;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,1962	0/0:9,0:9:24.08:0,24,336	0/0:17,0:17:42.95:0,43,608	0/0:19,0:19:39.33:0,39,570	0/0:38,0:38:99:0,111,1554	0/0:23,0:23:69.23:0,69,963	0/0:24,0:24:69.22:0,69,949	1/1:3,27:30:81.22:949,81,0	0/0:21,0:21:60.20:0,60,840	0/0:25,0:25:75.24:0,75,1034	0/0:27,0:27:81.27:0,81,1133	0/0:23,0:23:69.22:0,69,948	0/0:19,0:19:54.18:0,54,755	0/0:16,0:16:45.14:0,45,615	0/0:16,0:16:45.14:0,45,616	0/0:22,0:22:66.20:0,66,891	0/0:23,0:23:66.22:0,66,922	0/0:23,0:23:66.22:0,66,918	1/1:1,9:10:27.03:296,27,0	1/1:2,20:22:51.15:608,51,0	1/1:1,22:23:60.18:720,60,0	1/1:2,12:14:33.10:396,33,0	0/0:15,0:15:42.12:0,42,570	0/0:17,0:17:51.11:0,51,674	0/0:15,0:15:42.14:0,42,587	0/0:26,0:26:75.25:0,75,1050	1/1:1,28:29:78.24:935,78,0	0/0:14,0:14:42.14:0,42,588
chr10	84837879	.	TATC	T	2291.85	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.978;DP=551;FS=7.343;HRun=0;HaplotypeScore=81.2540;InbreedingCoeff=0.9705;MQ=77.46;MQ0=0;MQRankSum=-4.541;QD=38.20;ReadPosRankSum=0.470;VQSLOD=4.1806;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,43:43:99:1764,108,0	0/0:11,0:11:33.11:0,33,761	0/0:18,0:18:51.04:0,51,962	0/0:22,0:22:59.23:0,59,1282	0/0:18,0:18:54.17:0,54,1178	0/0:16,0:16:42.14:0,42,968	0/0:26,0:26:78.27:0,78,1798	0/0:26,0:26:63.21:0,63,1360	0/0:17,0:17:48.15:0,48,1061	0/0:19,0:19:54.64:0,55,1146	0/0:20,0:20:57.20:0,57,1313	0/0:18,0:18:51.17:0,51,1136	0/0:13,0:13:39.13:0,39,896	0/0:16,0:16:48.16:0,48,1102	0/0:14,0:14:42.13:0,42,924	0/0:19,0:19:54.17:0,54,1200	0/0:33,0:33:96.31:0,96,2144	0/0:25,0:25:75.19:0,75,1645	0/0:15,0:15:42.14:0,42,926	0/0:17,0:17:51.18:0,51,1157	0/0:36,0:36:99:0,108,2444	0/0:12,0:12:36.12:0,36,824	0/0:14,0:14:42.14:0,42,952	0/0:25,0:25:69.24:0,69,1535	1/1:0,17:17:42.01:650,42,0	0/0:22,0:22:66.23:0,66,1507	0/0:16,0:16:45.15:0,45,1030	0/0:3,0:3:9.03:0,9,208
chr10	84838059	.	TA	T	790.19	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.029;DP=414;FS=0.000;HRun=8;HaplotypeScore=38.3756;InbreedingCoeff=0.9464;MQ=65.37;MQ0=0;MQRankSum=-1.897;QD=19.75;ReadPosRankSum=0.503;VQSLOD=2.8394;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:23.07:332,23,0	0/0:5,0:5:15.05:0,15,181	0/0:6,0:5:12.01:0,12,124	0/0:11,0:9:21.06:0,21,245	0/0:19,0:19:57.17:0,57,688	0/0:19,0:19:54.16:0,54,643	0/0:7,0:7:21.05:0,21,241	0/0:27,0:27:75.21:0,75,887	0/0:11,0:11:27.07:0,27,316	0/0:21,0:21:57.16:0,57,671	0/0:21,0:21:57.17:0,57,689	0/0:6,0:6:18.04:0,18,206	0/0:17,0:17:51.16:0,51,616	0/0:9,0:9:27.08:0,27,326	0/0:14,0:14:39.12:0,39,471	0/0:11,0:11:27.08:0,27,326	0/0:37,0:37:99:0,99,1182	0/0:27,0:27:63.16:0,63,746	0/0:18,0:18:42.12:0,42,494	0/0:20,0:20:48.13:0,48,568	0/0:5,0:5:15.05:0,15,181	0/0:7,0:7:15.05:0,15,181	0/0:8,0:8:21.05:0,21,242	0/0:8,0:8:24.07:0,24,290	1/1:1,23:24:60.10:579,60,0	0/0:19,0:19:54.17:0,54,652	0/0:13,0:12:36.11:0,36,434	0/0:8,0:8:24.07:0,24,290
chr10	84838425	.	GGAGGCA	G	790.31	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.424;DP=625;FS=0.000;HRun=0;HaplotypeScore=130.1002;InbreedingCoeff=0.9917;MQ=69.08;MQ0=0;MQRankSum=-6.100;QD=35.92;ReadPosRankSum=-0.052;VQSLOD=3.3766;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.22:0,84,2494	0/0:18,0:18:51.18:0,51,1720	0/0:24,0:24:51.17:0,51,1467	0/0:20,0:20:39.11:0,39,1087	0/0:29,0:29:74.95:0,75,2216	0/0:15,0:15:39.13:0,39,1195	1/1:4,18:22:42.14:885,42,0	0/0:25,0:25:39.11:0,39,1044	0/0:20,0:20:54.19:0,54,1788	0/0:20,0:20:42.14:0,42,1184	0/0:23,0:23:60.14:0,60,1860	0/0:28,0:28:69.24:0,69,2213	0/0:21,0:21:48.15:0,48,1470	0/0:25,0:25:48.16:0,48,1534	0/0:19,0:19:48.16:0,48,1591	0/0:20,0:20:51.18:0,51,1720	0/0:27,0:27:60.18:0,60,1823	0/0:10,0:10:21.07:0,21,708	0/0:23,0:23:54.19:0,54,1771	0/0:27,0:27:60.19:0,60,1879	0/0:28,0:28:60.21:0,60,1911	0/0:21,0:21:54.17:0,54,1659	0/0:24,0:24:60.18:0,60,1755	0/0:27,0:27:69.24:0,69,2271	0/0:9,0:24:57.17:0,57,1283	0/0:25,0:25:66.22:0,66,2022	0/0:22,0:22:60.19:0,60,1846	0/0:7,0:7:21.07:0,21,708
chr10	84838872	.	TG	T	1417.65	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.904;DP=625;FS=3.314;HRun=7;HaplotypeScore=67.0244;InbreedingCoeff=0.9722;MQ=75.30;MQ0=0;MQRankSum=-0.958;QD=22.15;ReadPosRankSum=1.328;VQSLOD=3.5206;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:33:84.18:856,84,0	0/0:11,0:11:30.10:0,30,377	0/0:16,0:15:26.56:0,27,237	0/0:14,0:13:14.52:0,15,141	0/0:30,0:30:72.22:0,72,894	0/0:25,0:25:69.21:0,69,855	1/1:2,13:15:33.07:337,33,0	0/0:22,0:22:54.13:0,54,648	0/0:22,0:22:59.22:0,59,723	0/0:28,0:28:72.23:0,72,903	0/0:16,0:16:48.06:0,48,569	0/0:18,0:18:54.14:0,54,640	0/0:21,0:21:57.17:0,57,703	0/0:20,0:20:54.17:0,54,678	0/0:33,0:33:90.29:0,90,1130	0/0:28,0:28:78.25:0,78,980	0/0:39,0:39:99:0,111,1338	0/0:21,1:22:26.53:0,27,619	0/0:13,0:13:36.12:0,36,453	0/0:23,0:23:63.20:0,63,789	0/0:28,0:28:78.24:0,78,966	0/0:20,0:20:48.15:0,48,601	0/0:13,0:13:36.10:0,36,440	0/0:33,0:33:90.24:0,90,1102	1/1:0,16:16:36.08:367,36,0	0/0:25,0:25:69.19:0,69,833	0/0:36,0:36:81.24:0,81,1005	0/0:4,0:4:9.03:0,9,113
chr10	84839536	.	AT	A	11542.28	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=18.269;DP=647;FS=8.727;HRun=4;HaplotypeScore=98.1938;InbreedingCoeff=0.9913;MQ=75.83;MQ0=0;MQRankSum=-1.630;QD=31.11;ReadPosRankSum=-1.694;VQSLOD=3.8089;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:99:1255,105,0	1/1:0,21:21:63.19:753,63,0	0/0:13,0:13:35.82:0,36,346	0/0:13,0:13:19.90:0,20,194	0/0:25,0:25:69.23:0,69,958	0/0:18,0:18:45.13:0,45,597	1/1:2,25:27:66.20:789,66,0	1/1:7,21:30:83.07:884,83,0	0/0:23,0:23:66.21:0,66,906	1/1:1,25:26:75.06:835,75,0	1/1:2,19:21:45.88:517,46,0	0/0:25,0:25:72.21:0,72,948	0/0:25,0:25:69.22:0,69,947	0/0:15,0:15:45.13:0,45,596	0/0:19,0:19:51.16:0,51,696	1/1:0,27:27:72.22:861,72,0	1/1:1,32:33:87.27:1040,87,0	0/0:17,0:17:51.11:0,51,674	1/1:0,12:12:36:397,36,0	1/1:0,25:25:65.98:721,66,0	1/1:0,26:26:72.22:861,72,0	1/1:1,29:30:87.13:1004,87,0	0/0:25,0:25:72.21:0,72,958	0/0:26,0:26:72.17:0,72,949	1/1:4,16:22:59.84:621,60,0	0/0:28,1:29:59.58:0,60,1016	1/1:1,33:34:84.26:1004,84,0	0/0:3,0:3:9.02:0,9,109
chr10	84839939	.	A	AACAACAACAC	994.09	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=5.242;DP=658;FS=0.650;HRun=0;HaplotypeScore=211.8692;InbreedingCoeff=0.3732;MQ=49.68;MQ0=30;MQRankSum=-6.212;QD=7.42;ReadPosRankSum=-1.728;VQSLOD=2.5141;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:38:99:182,0,240	0/0:7,0:7:8.49:0,8,82	0/0:26,0:9:21.07:0,21,504	0/0:50,0:13:28.49:0,28,586	0/0:25,0:24:44.64:0,45,1563	0/0:23,0:23:63.21:0,63,1815	0/0:15,0:13:6.02:0,6,138	0/0:42,0:38:64.16:0,64,1582	0/0:28,0:29:82.10:0,82,2093	0/0:26,0:21:56.64:0,57,909	1/1:18,0:17:11.50:89,11,0	0/0:21,0:20:57.18:0,57,1622	0/0:25,0:25:44.14:0,44,1389	0/0:12,0:12:27.08:0,27,714	0/0:29,0:29:74.58:0,75,1992	0/1:26,0:23:53.33:53,0,93	0/1:23,0:21:36.93:37,0,61	0/0:27,0:27:63.14:0,63,1715	0/0:18,0:18:53.68:0,54,755	0/0:21,0:21:11.46:0,11,624	0/0:27,0:25:29.97:0,30,708	0/0:11,0:11:18.64:0,19,348	0/0:13,0:12:26.76:0,27,739	0/0:41,0:41:99:0,105,2828	1/1:6,9:18:25.05:765,25,0	0/0:26,0:26:37.63:0,38,1411	0/1:9,0:9:11.62:12,0,434	0/0:10,0:10:27.09:0,27,760
chr10	84839967	.	A	ACACACACACACACC	7258.78	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=6.917;DP=707;FS=6.507;HRun=0;HaplotypeScore=267.0707;InbreedingCoeff=0.0307;MQ=67.51;MQ0=8;MQRankSum=-6.744;QD=19.83;ReadPosRankSum=-4.890;VQSLOD=2.3670;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:99:291,0,153	0/1:7,0:7:9.90:444,0,10	0/0:29,0:18:25.35:0,25,307	0/0:47,0:24:46.57:0,47,440	0/0:26,0:26:48.03:0,48,1531	0/0:19,0:19:51.10:0,51,1558	0/1:18,0:18:32.77:33,0,144	0/1:40,0:37:99:778,0,429	0/0:28,0:28:84.15:0,84,2672	0/1:28,0:25:99:706,0,253	0/1:23,0:22:99:422,0,134	0/0:16,0:16:42.06:0,42,1031	0/0:23,0:23:40.92:0,41,1382	0/0:21,0:21:53.78:0,54,912	0/0:35,0:35:90.13:0,90,2776	0/1:27,0:27:99:484,0,222	0/1:27,0:25:99:602,0,149	0/0:29,0:29:77.99:0,78,1649	1/1:22,0:20:55.42:986,55,0	1/1:17,0:19:25.17:676,25,0	0/1:42,0:40:99:161,0,398	0/1:14,0:14:99:388,0,139	0/0:14,0:13:35.79:0,36,922	0/0:44,0:45:50.56:0,51,2953	0/1:12,0:12:12.91:401,0,13	0/1:27,0:27:99:104,0,1058	1/1:5,18:25:17.63:784,18,0	0/0:8,0:9:27.08:0,27,950
chr10	84839968	.	C	CACACACACACACCC	4583.85	PASS	AB=0.992;AC=18;AF=0.321;AN=56;BaseQRankSum=5.994;DP=664;FS=2.668;HRun=0;HaplotypeScore=243.0029;InbreedingCoeff=0.0092;MQ=70.64;MQ0=8;MQRankSum=-6.994;QD=14.37;ReadPosRankSum=-4.237;VQSLOD=3.1331;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:99:291,0,153	0/1:4,0:4:15.92:174,0,16	0/0:29,0:18:25.35:0,25,307	0/0:49,0:26:46.57:0,47,440	0/0:26,0:26:48.03:0,48,1531	0/0:20,0:20:51.10:0,51,1558	0/1:18,0:18:32.77:33,0,144	0/1:31,0:30:99:512,0,443	0/0:27,0:27:81.14:0,81,2604	0/1:22,0:20:99:269,0,265	0/1:22,0:21:99:422,0,134	0/0:17,0:17:42.06:0,42,1031	0/0:23,0:23:40.92:0,41,1382	0/0:21,0:21:53.78:0,54,912	0/0:34,0:34:90.13:0,90,2776	0/1:23,0:23:99:484,0,222	0/1:23,0:22:99:341,0,155	0/0:29,0:29:74.99:0,75,1618	1/1:15,0:14:38:409,38,0	1/1:10,4:17:28.14:696,28,0	0/1:38,0:37:99:161,0,398	0/1:12,0:12:99:157,0,145	0/0:15,0:14:36.05:0,36,922	0/0:45,0:45:50.56:0,51,2953	0/1:5,0:5:15.92:248,0,16	0/1:29,0:29:99:104,0,1058	1/1:24,0:24:8.60:285,9,0	0/0:10,0:10:27.08:0,27,950
chr10	84840393	.	C	CAAA	1164.94	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.957;DP=573;FS=1.491;HRun=11;HaplotypeScore=84.6365;InbreedingCoeff=0.9417;MQ=65.01;MQ0=15;MQRankSum=-3.724;QD=21.57;ReadPosRankSum=0.617;VQSLOD=2.4444;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,32:38:51.17:1053,51,0	0/0:15,0:13:39.10:0,39,518	0/0:21,0:13:12.27:0,12,186	0/0:17,0:7:17.97:0,18,128	0/0:23,0:22:60.19:0,60,835	0/0:16,0:16:45.13:0,45,618	0/0:26,0:24:57.18:0,57,785	0/0:24,0:20:28.52:0,29,543	0/0:20,0:19:51.15:0,51,697	0/0:22,0:22:57.16:0,57,756	0/0:22,0:21:48.14:0,48,669	0/0:22,0:22:60.17:0,60,799	0/0:8,0:8:24.08:0,24,336	0/0:21,0:20:45.08:0,45,581	0/0:22,0:22:63.18:0,63,854	0/0:8,0:7:15.04:0,15,212	0/0:27,0:27:78.18:0,78,1019	0/0:29,0:28:75.17:0,75,1010	0/0:24,0:24:61.95:0,62,792	0/0:18,0:18:51.15:0,51,677	0/0:8,0:8:21.07:0,21,295	0/0:16,0:15:36.12:0,36,507	0/0:19,0:19:51.16:0,51,692	0/0:40,0:39:99:0,105,1407	1/1:1,0:14:30.36:234,30,0	0/0:22,0:22:66.20:0,66,884	0/0:24,0:22:66.13:0,66,858	0/0:5,0:5:9.02:0,9,126
chr10	84841586	.	GA	G	393.78	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.252;DP=345;FS=6.211;HRun=2;HaplotypeScore=42.1651;InbreedingCoeff=0.8262;MQ=82.80;MQ0=0;MQRankSum=-0.579;QD=14.06;ReadPosRankSum=-2.031;VQSLOD=1.9663;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:44.90:362,45,0	0/0:3,0:3:6:0,6,51	0/0:22,0:19:36.59:0,37,348	0/0:18,0:15:27.49:0,27,255	0/0:23,0:23:45.90:0,46,389	0/0:10,0:10:23.89:0,24,189	0/0:13,0:13:32.16:0,32,266	0/0:22,1:23:50.86:0,51,434	0/0:11,0:11:26.53:0,27,240	0/0:8,0:8:15:0,15,134	0/0:3,0:3:6:0,6,52	0/0:4,0:4:11.94:0,12,92	0/0:15,0:15:45.01:0,45,418	0/0:10,1:11:14.59:0,15,130	0/0:9,0:9:12.29:0,12,110	0/0:5,0:5:12.01:0,12,117	0/0:10,0:10:23.99:0,24,224	0/0:11,0:11:26.99:0,27,249	0/0:12,0:12:35.71:0,36,298	0/0:14,0:14:38.01:0,38,316	0/0:13,0:13:26.96:0,27,226	0/0:6,0:6:12:0,12,104	0/0:7,1:8:17.97:0,18,152	0/0:13,0:13:36.01:0,36,317	1/1:7,1:8:17.99:151,18,0	0/0:17,0:17:47.73:0,48,405	0/0:24,0:24:47.87:0,48,401	0/0:9,0:9:26.99:0,27,264
chr10	84842461	.	T	TC	1029.53	PASS	AC=22;AF=0.423;AN=52;BaseQRankSum=-2.251;DP=244;FS=5.998;HRun=2;HaplotypeScore=45.2218;InbreedingCoeff=0.8275;MQ=39.22;MQ0=21;MQRankSum=-1.067;QD=15.84;ReadPosRankSum=-1.945;VQSLOD=2.6127;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:23.94:0,24,214	1/1:0,1:1:3.01:42,3,0	./.	./.	0/0:5,0:5:12:0,12,106	0/0:19,0:19:41.91:0,42,255	0/0:10,0:9:10.21:0,10,74	1/1:1,0:8:20.91:198,21,0	0/0:7,0:7:14.94:0,15,110	1/1:1,2:2:5.98:62,6,0	1/1:0,6:7:8.94:101,9,0	0/0:9,0:9:24.56:0,25,140	0/0:7,0:7:11.12:0,11,67	0/0:12,0:12:25.77:0,26,169	0/0:8,0:8:17.82:0,18,144	1/1:0,1:3:6.02:82,6,0	1/1:2,8:10:12.02:150,12,0	0/0:10,0:10:25.83:0,26,169	1/1:2,7:9:21.03:257,21,0	1/1:1,7:7:11.87:95,12,0	1/1:0,6:6:3.01:35,3,0	1/1:0,4:4:8.86:76,9,0	0/0:4,0:4:9.80:0,10,67	0/0:11,0:10:15.83:0,16,144	0/0:9,0:8:18.02:0,18,174	0/0:6,0:6:7.74:0,8,70	1/1:0,5:5:9.03:126,9,0	0/0:6,0:6:11.89:0,12,88
chr10	84842791	.	T	TC	950.17	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=0.112;DP=412;FS=10.808;HRun=5;HaplotypeScore=116.1501;InbreedingCoeff=0.8091;MQ=65.86;MQ0=9;MQRankSum=1.355;QD=14.18;ReadPosRankSum=1.962;VQSLOD=2.1822;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,16:18:30.09:399,30,0	0/0:2,0:2:6.02:0,6,68	0/0:15,0:11:24.03:0,24,251	0/1:20,0:10:3.04:3,0,212	0/0:15,0:14:24.87:0,25,237	0/0:14,0:13:33.03:0,33,357	1/1:7,7:12:10:292,10,0	0/0:18,0:18:45.11:0,45,493	0/0:9,0:9:20.81:0,21,206	0/0:18,0:17:48.11:0,48,532	0/0:7,0:7:11.99:0,12,122	0/0:13,0:13:32.94:0,33,328	0/0:14,0:14:36.09:0,36,400	0/0:4,0:4:12.02:0,12,127	0/0:14,0:14:33.09:0,33,374	0/0:13,0:13:35.53:0,36,333	0/0:21,0:21:56.90:0,57,572	0/0:10,0:9:26.39:0,26,263	0/0:16,0:14:42.08:0,42,461	0/0:8,0:8:12.03:0,12,135	0/0:43,0:42:99:0,100,1063	0/0:15,0:15:38.94:0,39,390	0/0:9,0:9:24.07:0,24,272	0/0:25,0:24:50.91:0,51,527	1/1:1,12:13:30.10:395,30,0	0/0:17,0:17:48.03:0,48,526	0/0:15,0:14:27.01:0,27,288	0/0:10,0:9:27.04:0,27,291
chr10	84843478	.	CA	C	492.49	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.211;DP=629;FS=1.039;HRun=1;HaplotypeScore=60.1663;InbreedingCoeff=0.9983;MQ=94.04;MQ0=0;MQRankSum=-0.814;QD=32.83;ReadPosRankSum=0.450;VQSLOD=3.2801;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,2181	0/0:9,0:9:27.09:0,27,431	0/0:28,0:28:81.28:0,81,1282	0/0:27,0:27:78.72:0,79,1154	0/0:18,0:18:54.18:0,54,858	0/0:17,0:17:51.17:0,51,807	1/1:0,15:15:42.14:587,42,0	0/0:19,0:19:57.19:0,57,909	0/0:20,0:20:60.20:0,60,956	0/0:26,0:26:75.25:0,75,1179	0/0:11,0:11:33.11:0,33,522	0/0:23,0:23:69.22:0,69,1080	0/0:22,0:22:66.23:0,66,1055	0/0:26,0:26:78.24:0,78,1196	0/0:20,0:20:60.20:0,60,959	0/0:15,0:15:45.15:0,45,712	0/0:36,0:36:99:0,105,1670	0/0:13,0:13:39.13:0,39,624	0/0:15,0:15:45.14:0,45,698	0/0:20,0:20:60.19:0,60,936	0/0:33,0:33:99:0,99,1580	0/0:28,0:28:84.29:0,84,1340	0/0:23,0:23:69.22:0,69,1079	0/0:25,0:25:75.26:0,75,1197	0/0:19,0:18:57.19:0,57,909	0/0:26,0:26:78.26:0,78,1226	0/0:35,0:35:99:0,105,1652	0/0:12,0:12:33.11:0,33,528
chr10	84846620	.	CCCA	C	1681.80	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=6.301;DP=231;FS=8.551;HRun=0;HaplotypeScore=41.7882;InbreedingCoeff=0.8602;MQ=83.03;MQ0=1;MQRankSum=-2.168;QD=20.76;ReadPosRankSum=1.125;VQSLOD=1.9796;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:21.59:89,22,0	0/0:3,0:3:9.03:0,9,187	0/0:18,0:16:20.36:0,20,487	0/0:17,0:11:10.53:0,11,208	0/0:12,0:12:30.10:0,30,622	0/0:11,0:11:33:0,33,499	1/1:7,1:8:11.33:91,11,0	1/1:1,12:13:32.29:452,32,0	0/0:6,0:5:15.05:0,15,314	0/0:2,0:2:6.02:0,6,130	0/0:3,0:3:9.03:0,9,194	0/0:10,0:10:27.09:0,27,582	0/0:8,0:8:24.07:0,24,473	0/0:9,0:9:24.08:0,24,494	0/0:5,0:5:15.05:0,15,315	0/0:4,0:4:12.03:0,12,196	0/0:8,0:8:22.59:0,23,321	0/0:10,0:9:22.55:0,23,347	1/1:1,1:2:3.01:50,3,0	1/1:0,7:7:18.02:271,18,0	1/1:3,11:14:12.04:201,12,0	1/1:1,5:6:12.04:202,12,0	0/0:6,0:6:12.04:0,12,257	0/0:7,0:7:15.05:0,15,276	1/1:4,0:4:5.36:21,5,0	0/0:8,0:8:24.07:0,24,458	1/1:1,13:14:30.07:503,30,0	0/0:2,0:2:6.02:0,6,130
chr10	84846621	.	CCA	C	1191.40	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=7.269;DP=226;FS=7.172;HRun=0;HaplotypeScore=38.1351;InbreedingCoeff=0.8628;MQ=81.89;MQ0=1;MQRankSum=-2.617;QD=15.08;ReadPosRankSum=1.004;VQSLOD=2.3339;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:12:24.08:362,24,0	0/0:3,0:3:9.03:0,9,147	0/0:18,0:16:26.36:0,26,431	0/0:17,0:10:10.10:0,10,192	0/0:11,0:11:30.10:0,30,505	0/0:11,0:11:32.98:0,33,416	1/1:2,6:8:12.01:140,12,0	1/1:13,0:13:30.33:227,30,0	0/0:6,0:5:15.05:0,15,251	0/0:2,0:2:6.02:0,6,106	0/0:3,0:3:9.03:0,9,157	0/0:10,0:10:27.09:0,27,473	0/0:8,0:8:24.07:0,24,379	0/0:9,0:9:24.06:0,24,390	0/0:5,0:5:15.05:0,15,261	0/0:4,0:4:12.03:0,12,173	0/0:8,0:8:22.58:0,23,269	0/0:10,0:9:20.25:0,20,253	1/1:2,0:2:2.99:23,3,0	1/1:7,0:7:17.90:134,18,0	1/1:14,0:14:11.95:91,12,0	1/1:5,0:5:11.95:92,12,0	0/0:5,0:5:12.04:0,12,208	0/0:6,0:6:15.05:0,15,237	1/1:0,4:4:6.02:91,6,0	0/0:8,0:8:24.07:0,24,386	1/1:14,0:13:29.87:230,30,0	0/0:2,0:2:6.02:0,6,106
chr10	84846789	.	A	AGTTT	6322.46	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-8.297;DP=534;FS=12.324;HRun=0;HaplotypeScore=85.8274;InbreedingCoeff=0.9892;MQ=70.75;MQ0=0;MQRankSum=0.734;QD=35.72;ReadPosRankSum=-2.664;VQSLOD=3.6834;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:30.10:581,30,0	0/0:9,0:9:24.05:0,24,353	0/0:11,0:11:15.04:0,15,180	0/0:12,0:12:11.16:0,11,177	0/0:20,0:20:48.09:0,48,696	0/0:19,0:19:54.08:0,54,825	1/1:16,0:16:24.08:388,24,0	1/1:9,15:24:56.84:911,57,0	0/0:14,0:14:36.08:0,36,549	0/0:15,0:15:27.06:0,27,381	0/0:13,0:13:36.06:0,36,503	0/0:23,0:23:63.11:0,63,877	0/0:17,0:17:45.07:0,45,652	0/0:15,0:15:36.10:0,36,556	0/0:26,0:26:75.17:0,75,1087	0/0:16,0:16:30.08:0,30,451	0/0:31,0:31:72.14:0,72,1070	0/0:31,0:31:75.14:0,75,1129	1/1:3,15:19:48.06:766,48,0	1/1:6,20:26:59.98:1277,60,0	1/1:6,20:26:45.15:1120,45,0	1/1:8,12:20:29.69:459,30,0	0/0:15,0:15:36.04:0,36,474	0/0:10,0:10:21.07:0,21,354	0/0:17,0:17:48.15:0,48,783	0/0:29,0:29:44.14:0,44,959	1/1:5,17:21:33.11:821,33,0	0/0:14,0:14:41.58:0,42,430
chr10	84846802	.	G	GTTTGTTTATTTA	2604.18	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=-6.369;DP=546;FS=13.952;HRun=0;HaplotypeScore=185.8228;InbreedingCoeff=0.1220;MQ=62.74;MQ0=0;MQRankSum=1.302;QD=15.50;ReadPosRankSum=-4.011;VQSLOD=0.7200;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:28:36.06:1987,36,0	0/0:9,0:9:27.05:0,27,730	0/0:8,0:8:18.05:0,18,300	0/0:8,0:8:17.20:0,17,471	0/0:18,0:18:51.09:0,51,1357	0/0:23,0:23:66.11:0,66,1923	0/0:3,0:15:17.40:0,17,68	0/1:31,0:31:99:235,0,449	0/0:15,0:15:45.12:0,45,1282	0/0:13,0:13:30.06:0,30,775	0/0:14,0:14:39.07:0,39,1003	0/0:24,0:24:69.12:0,69,1806	0/0:19,0:19:57.09:0,57,1502	0/0:21,0:21:57.15:0,57,1493	0/0:26,0:27:78.19:0,78,2227	0/0:14,0:14:36.07:0,36,925	0/0:35,0:35:99:0,99,2596	0/0:29,0:29:81.16:0,81,2464	0/1:21,0:21:99:229,0,157	0/1:25,0:25:64.88:120,0,65	0/1:23,0:23:97.03:97,0,104	0/1:20,0:20:46.41:46,0,227	0/0:16,0:16:45.05:0,45,1004	0/0:14,0:14:39.07:0,39,984	0/0:17,0:17:47.02:0,47,1322	0/0:25,0:25:47.15:0,47,2013	0/1:20,0:20:31.83:32,0,40	0/0:14,0:14:41.58:0,42,678
chr10	84849267	.	C	CTT	2562.39	PASS	AB=0.615;AC=25;AF=0.446;AN=56;BaseQRankSum=2.688;DP=592;FS=11.394;HRun=14;HaplotypeScore=105.5616;InbreedingCoeff=0.7306;MQ=78.02;MQ0=2;MQRankSum=-0.626;QD=8.03;ReadPosRankSum=-3.045;VQSLOD=-0.2657;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:46:71.58:72,0,101	1/1:4,0:14:16.07:63,16,0	0/0:26,0:20:17.57:0,18,132	0/0:26,0:24:0.47:0,0,94	0/0:23,0:25:45.95:0,46,375	0/0:16,0:17:28.08:0,28,267	1/1:13,7:24:54.01:534,54,0	1/1:17,6:24:12.57:189,13,0	0/0:16,0:16:26.67:0,27,214	1/1:9,1:29:17.68:155,18,0	1/1:4,0:15:20.18:94,20,0	0/0:16,0:17:35.71:0,36,300	0/0:9,0:13:8.03:0,8,77	0/0:15,0:17:22.88:0,23,162	0/0:17,0:17:29.66:0,30,247	0/1:7,0:19:9.31:30,0,9	1/1:2,0:16:15.29:83,15,0	0/0:20,0:22:50.38:0,50,411	1/1:15,9:25:28.69:261,29,0	1/1:7,11:23:21.73:343,22,0	1/1:8,7:17:20.41:229,20,0	1/1:8,14:26:35.71:341,36,0	0/0:22,0:22:26.57:0,27,216	0/0:14,0:16:41.36:0,41,319	0/1:6,3:21:11.33:163,0,11	0/0:24,0:27:8.90:0,9,252	1/1:6,13:20:22.63:222,23,0	0/0:10,0:10:17.83:0,18,145
chr10	84849473	.	C	CA	719.68	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.303;DP=509;FS=6.155;HRun=0;HaplotypeScore=69.5645;InbreedingCoeff=0.9818;MQ=68.52;MQ0=0;MQRankSum=-9.811;QD=17.14;ReadPosRankSum=1.186;VQSLOD=5.9421;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:53.72:402,54,0	0/0:13,0:13:39.13:0,39,542	0/0:8,0:9:14.63:0,15,164	0/0:7,0:7:15.04:0,15,194	0/0:29,0:29:87.29:0,87,1215	0/0:23,0:23:69.21:0,69,946	1/1:0,5:5:14.89:107,15,0	0/0:25,0:25:66.22:0,66,922	0/0:13,0:13:39.13:0,39,545	0/0:28,0:28:84.28:0,84,1175	0/0:26,0:26:75.25:0,75,1048	0/0:19,0:19:54.18:0,54,754	0/0:12,0:12:36.12:0,36,503	0/0:18,0:18:51.17:0,51,711	0/0:12,0:12:33.11:0,33,461	0/0:14,0:14:39.10:0,39,519	0/0:29,0:29:81.27:0,81,1128	0/0:15,0:15:42.14:0,42,587	0/0:16,0:15:45.15:0,45,629	0/0:16,0:16:48.15:0,48,653	0/0:22,0:22:66.20:0,66,902	0/0:21,0:21:60.20:0,60,837	0/0:18,0:18:51.16:0,51,696	0/0:24,0:24:72.24:0,72,1006	1/1:1,16:17:47.71:351,48,0	0/0:31,0:31:87.29:0,87,1215	0/0:18,0:18:45.15:0,45,626	0/0:9,0:9:27.09:0,27,377
chr10	84849482	.	A	AG	713.68	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.689;DP=520;FS=2.691;HRun=1;HaplotypeScore=73.2008;InbreedingCoeff=0.9949;MQ=69.14;MQ0=0;MQRankSum=-10.866;QD=14.27;ReadPosRankSum=0.424;VQSLOD=3.0276;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:63.94:414,64,0	0/0:10,0:10:30.10:0,30,389	0/0:11,0:11:29.46:0,29,350	0/0:7,0:7:18.02:0,18,215	0/0:31,0:31:90.28:0,90,1152	0/0:23,0:23:66.21:0,66,857	1/1:4,5:9:23.27:174,23,0	0/0:20,0:20:39.12:0,39,493	0/0:14,0:14:39.13:0,39,506	0/0:25,0:25:69.22:0,69,885	0/0:25,0:25:75.22:0,75,945	0/0:19,0:19:54.18:0,54,701	0/0:14,0:14:36.12:0,36,467	0/0:19,0:19:57.17:0,57,720	0/0:12,0:12:36.12:0,36,467	0/0:11,0:11:33.11:0,33,428	0/0:31,0:30:84.27:0,84,1090	0/0:17,0:17:48.16:0,48,619	0/0:20,0:19:51.17:0,51,660	0/0:19,0:19:54.16:0,54,685	0/0:21,0:21:63.20:0,63,810	0/0:21,0:21:60.19:0,60,779	0/0:21,0:21:56.38:0,56,694	0/0:24,0:24:69.22:0,69,896	1/1:0,16:16:46.19:268,46,0	0/0:32,0:32:90.28:0,90,1155	0/0:15,0:15:45.15:0,45,583	0/0:8,0:8:24.08:0,24,312
chr10	84850441	.	C	CT	7804.14	PASS	AB=0.931;AC=29;AF=0.518;AN=56;BaseQRankSum=-6.705;DP=547;FS=3.553;HRun=8;HaplotypeScore=68.8128;InbreedingCoeff=0.9491;MQ=66.71;MQ0=0;MQRankSum=1.996;QD=23.23;ReadPosRankSum=0.125;VQSLOD=5.5512;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:70.35:436,70,0	1/1:1,11:12:30.09:346,30,0	0/0:10,0:8:11.13:0,11,75	0/0:13,0:12:19.60:0,20,195	0/0:24,0:24:63:0,63,566	0/0:14,0:14:39.01:0,39,357	1/1:16,0:16:32.26:193,32,0	1/1:9,30:39:96.24:1092,96,0	0/0:18,0:18:29.98:0,30,270	1/1:3,26:29:78.12:851,78,0	1/1:3,19:22:51.15:589,51,0	0/0:15,0:15:39:0,39,349	0/0:5,0:5:9:0,9,82	0/0:17,0:18:47.03:0,47,410	0/0:16,0:16:42.01:0,42,380	1/1:1,11:12:27.08:311,27,0	1/1:4,22:26:62.67:701,63,0	0/0:26,0:26:66.01:0,66,598	1/1:4,17:21:51.15:588,51,0	1/1:2,13:15:33.10:381,33,0	1/1:4,12:16:45.03:479,45,0	1/1:1,15:16:36.07:401,36,0	0/0:22,0:22:54:0,54,489	0/0:17,0:17:35.97:0,36,321	1/1:23,0:23:58.68:363,59,0	0/1:25,2:27:0.20:0,0,508	1/1:3,32:35:93.28:1073,93,0	0/0:11,0:11:33.02:0,33,302
chr10	84850449	.	T	TTA	2845.08	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=9.028;DP=545;FS=3.161;HRun=0;HaplotypeScore=93.2730;InbreedingCoeff=0.5469;MQ=64.00;MQ0=1;MQRankSum=-4.040;QD=19.76;ReadPosRankSum=0.009;VQSLOD=3.5493;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:72.16:1252,72,0	0/0:11,0:11:4.24:0,4,9	0/0:11,0:8:7.42:0,7,129	0/0:19,0:14:27.03:0,27,339	0/0:29,0:29:83.37:0,83,1023	0/0:15,0:15:45.12:0,45,618	1/1:0,15:17:33.11:600,33,0	0/0:36,0:36:29.11:0,29,159	0/0:12,0:12:36.04:0,36,461	0/1:29,0:29:27.54:28,0,46	0/0:20,0:20:8.01:0,8,19	0/0:14,0:14:39.09:0,39,529	0/0:3,0:3:9.03:0,9,131	0/0:19,0:19:57.09:0,57,712	0/0:14,0:14:42.12:0,42,592	0/0:12,0:12:7.65:0,8,35	0/1:23,0:24:2.38:2,0,27	0/0:25,0:25:72.17:0,72,989	0/0:21,0:20:16.96:0,17,87	0/0:13,0:13:11.16:0,11,59	0/1:16,0:16:17.62:46,0,18	0/0:15,0:15:6.39:0,6,26	0/0:22,0:22:63.15:0,63,845	0/0:16,0:16:42.09:0,42,568	1/1:1,24:25:60.20:1070,60,0	0/0:27,0:27:73.16:0,73,1004	0/0:35,0:35:23.60:0,24,107	0/0:12,0:12:36.09:0,36,504
chr10	84850595	.	C	CT	224.42	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.807;DP=470;FS=11.858;HRun=9;HaplotypeScore=52.3992;InbreedingCoeff=0.7918;MQ=55.71;MQ0=10;MQRankSum=-1.234;QD=13.20;ReadPosRankSum=0.626;VQSLOD=1.8004;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:80.96:0,81,702	0/0:7,0:7:14.99:0,15,130	0/0:11,0:6:15:0,15,130	0/0:15,0:4:8.83:0,9,66	0/0:14,0:14:32.97:0,33,286	0/0:10,0:10:20.97:0,21,178	1/1:6,11:17:7.03:306,7,0	0/0:27,1:24:32.81:0,33,514	0/0:11,0:11:26.84:0,27,234	0/0:15,0:15:35.99:0,36,313	0/0:16,0:16:35.02:0,35,292	0/0:15,0:15:26.82:0,27,234	0/0:7,0:7:17.98:0,18,153	0/0:11,0:11:32.99:0,33,286	0/0:18,0:18:35.97:0,36,308	0/0:11,0:11:23.99:0,24,208	0/0:27,0:27:74.97:0,75,647	0/0:27,0:27:65.93:0,66,567	0/0:17,0:16:32.98:0,33,286	0/0:29,0:29:62.96:0,63,547	0/0:25,0:25:53.95:0,54,468	0/0:9,0:9:20.20:0,20,163	0/0:13,0:13:29.98:0,30,260	0/0:17,0:17:41.98:0,42,364	0/0:16,0:16:35.99:0,36,313	0/0:17,0:17:41.98:0,42,364	0/0:21,0:21:38.94:0,39,338	0/0:7,0:6:15:0,15,130
chr10	84851523	.	AT	A	817.53	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.687;DP=510;FS=2.187;HRun=9;HaplotypeScore=56.9097;InbreedingCoeff=0.6974;MQ=67.21;MQ0=0;MQRankSum=0.866;QD=19.94;ReadPosRankSum=1.349;VQSLOD=4.1858;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,37:41:99:912,101,0	0/0:6,0:6:18.05:0,18,208	0/0:3,0:3:5.85:0,6,49	0/0:5,0:6:5.35:0,5,37	0/0:20,1:21:26.67:0,27,536	0/0:21,0:21:57.16:0,57,650	0/0:12,0:13:29.92:0,30,326	0/0:23,0:23:51.15:0,51,589	0/0:17,0:17:45.12:0,45,510	0/0:26,0:26:72.21:0,72,830	0/0:16,0:16:42.12:0,42,485	0/0:15,0:15:39.12:0,39,450	0/0:10,1:11:2.62:0,3,284	0/0:18,0:18:48.14:0,48,553	0/0:13,0:13:33.09:0,33,373	0/0:17,0:17:48.13:0,48,544	0/0:34,0:35:95.92:0,96,1007	0/0:21,0:21:57.17:0,57,657	0/0:17,0:17:51.14:0,51,580	0/0:20,0:20:57.16:0,57,647	0/0:24,0:24:69.13:0,69,745	0/0:23,0:23:60.17:0,60,682	0/0:21,0:21:57.17:0,57,658	0/0:17,0:17:48.14:0,48,554	0/0:16,0:16:40.35:0,40,446	0/0:23,0:23:66.18:0,66,753	0/0:17,0:17:45.11:0,45,500	0/0:9,0:9:27.08:0,27,311
chr10	84852094	.	TG	T	665.41	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.441;DP=531;FS=14.029;HRun=6;HaplotypeScore=58.2425;InbreedingCoeff=0.9948;MQ=83.97;MQ0=0;MQRankSum=-3.199;QD=25.59;ReadPosRankSum=-0.583;VQSLOD=2.1582;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.25:0,90,1146	0/0:8,0:8:24.08:0,24,315	0/0:21,0:21:54.16:0,54,680	0/0:19,0:19:25.08:0,25,470	0/0:13,0:13:36.10:0,36,456	0/0:18,0:18:54.16:0,54,693	1/1:2,24:26:72.14:760,72,0	0/0:17,0:17:39.12:0,39,495	0/0:20,0:20:57.18:0,57,747	0/0:17,0:17:39.12:0,39,500	0/0:11,0:11:30.10:0,30,395	0/0:24,0:24:69.22:0,69,898	0/0:10,0:10:30.10:0,30,392	0/0:18,0:18:51.11:0,51,633	0/0:19,0:19:51.15:0,51,655	0/0:31,0:31:84.26:0,84,1086	0/0:23,0:23:60.20:0,60,789	0/0:17,0:17:48.14:0,48,617	0/0:17,0:17:48.15:0,48,617	0/0:15,0:15:42.14:0,42,550	0/0:25,0:25:72.22:0,72,930	0/0:21,0:21:45.15:0,45,590	0/0:16,0:16:48.16:0,48,630	0/0:19,0:19:54.12:0,54,677	0/0:17,0:16:51.17:0,51,668	0/0:23,0:23:60.20:0,60,789	0/0:21,0:21:60.15:0,60,759	0/0:11,0:11:33.11:0,33,434
chr10	84852194	.	AAC	A	695.49	PASS	AB=0.958;AC=32;AF=0.696;AN=46;BaseQRankSum=4.887;DP=402;FS=0.000;HRun=0;HaplotypeScore=63.1997;InbreedingCoeff=0.2610;MQ=73.83;MQ0=7;MQRankSum=0.049;QD=2.44;ReadPosRankSum=1.088;VQSLOD=1.4912;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:25:8.60:35,9,0	./.	./.	./.	0/1:11,1:11:16.91:17,0,150	0/1:11,1:12:22.96:23,0,77	1/1:17,0:19:2.84:14,3,0	./.	0/0:17,0:17:9.01:0,9,109	1/1:9,0:10:2.84:14,3,0	0/1:8,1:9:0:0,0,0	0/0:12,0:12:6:0,6,68	./.	0/0:10,0:10:3.01:0,3,44	0/1:19,0:19:22.87:23,0,73	1/1:6,3:10:8.86:78,9,0	1/1:15,5:20:9.02:96,9,0	0/0:15,0:15:12.02:0,12,156	1/1:7,2:9:6.01:62,6,0	1/1:9,3:12:9.45:84,9,0	1/1:18,0:22:11.66:74,12,0	1/1:18,1:20:8.84:71,9,0	0/1:10,0:8:4.20:4,0,55	0/1:20,0:20:15.04:15,0,79	1/1:12,0:18:14.20:70,14,0	1/1:14,0:19:10.95:55,11,0	1/1:9,2:11:6.02:64,6,0	1/1:4,0:7:8.52:42,9,0
chr10	84852376	.	C	CT	792.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.554;DP=553;FS=0.000;HRun=1;HaplotypeScore=79.1067;InbreedingCoeff=0.9798;MQ=79.62;MQ0=0;MQRankSum=-4.341;QD=37.76;ReadPosRankSum=-2.486;VQSLOD=3.0292;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,1626	0/0:10,0:10:30.10:0,30,389	0/0:24,0:24:37.79:0,38,539	0/0:25,0:24:68.98:0,69,804	0/0:11,0:11:27.09:0,27,350	0/0:11,0:11:33.08:0,33,407	1/1:2,19:21:63.18:888,63,0	0/0:24,0:24:60.19:0,60,767	0/0:20,0:20:60.15:0,60,745	0/0:20,0:20:54.18:0,54,701	0/0:12,0:12:36.10:0,36,452	0/0:19,0:19:54.18:0,54,700	0/0:14,0:14:36.08:0,36,425	0/0:12,0:12:36.12:0,36,467	0/0:29,0:29:87.25:0,87,1084	0/0:8,0:8:24.06:0,24,297	0/0:32,0:32:93.30:0,93,1207	0/0:10,0:10:30.10:0,30,389	0/0:21,0:21:60.13:0,60,747	0/0:17,0:17:41.92:0,42,518	0/0:32,0:32:93.24:0,93,1160	0/0:21,0:21:48.14:0,48,607	0/0:19,0:19:53.69:0,54,672	0/0:28,0:28:84.21:0,84,1054	0/0:24,0:24:63.19:0,63,802	0/0:22,0:22:66.21:0,66,856	0/0:17,0:17:48.16:0,48,623	0/0:5,0:5:15.05:0,15,195
chr10	84852404	.	CA	C	4207.05	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.650;DP=571;FS=9.080;HRun=6;HaplotypeScore=82.1860;InbreedingCoeff=0.9993;MQ=87.73;MQ0=0;MQRankSum=-2.480;QD=19.21;ReadPosRankSum=2.062;VQSLOD=2.6443;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:45:81.48:239,81,0	0/0:9,0:9:27.09:0,27,355	0/0:21,0:22:28.67:0,29,596	0/0:22,0:22:42.45:0,42,532	0/0:16,0:16:48.15:0,48,624	0/0:12,0:12:33.11:0,33,434	1/1:1,0:23:38.70:113,39,0	1/1:4,26:30:75.17:798,75,0	0/0:25,0:25:66.21:0,66,866	0/0:22,0:22:57.18:0,57,737	0/0:10,0:10:30.10:0,30,394	0/0:19,0:19:57.19:0,57,749	0/0:15,0:15:45.15:0,45,592	0/0:16,0:16:48.16:0,48,632	0/0:22,0:22:63.19:0,63,801	0/0:10,0:10:30.10:0,30,395	0/0:36,0:36:99:0,102,1325	0/0:14,0:14:39.13:0,39,513	1/1:0,18:18:54.09:559,54,0	1/1:1,12:13:36.09:387,36,0	1/1:2,30:32:90.23:967,90,0	1/1:0,20:20:51.13:548,51,0	0/0:18,0:18:39.08:0,39,491	0/0:28,0:27:78.25:0,78,1026	1/1:0,0:21:38.70:113,39,0	0/0:25,0:25:66.14:0,66,818	1/1:3,14:17:45.11:482,45,0	0/0:9,0:9:27.09:0,27,355
chr10	84852690	.	CACACACACACACACACACAG	C	348.34	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=0.294;DP=688;FS=17.474;HRun=0;HaplotypeScore=299.9910;InbreedingCoeff=0.2679;MQ=55.86;MQ0=23;MQRankSum=-1.594;QD=2.35;ReadPosRankSum=-1.999;VQSLOD=0.5685;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:41:1.02:1,0,2693	0/0:11,0:11:1.37:0,1,959	0/1:46,0:19:46.93:47,0,124	0/1:37,0:18:34.92:35,0,79	0/0:15,0:15:30.10:0,30,2327	0/0:19,0:19:36.11:0,36,2203	1/1:5,19:24:9.03:373,9,0	0/0:41,0:37:72.08:0,72,2480	0/0:27,0:26:51.61:0,52,4167	0/0:22,0:20:36.12:0,36,2068	0/0:17,0:17:15.04:0,15,608	0/0:29,0:29:66.66:0,67,5552	0/0:17,0:17:33.10:0,33,2178	0/0:25,0:24:51.17:0,51,4074	0/0:26,0:26:54.07:0,54,3828	0/0:16,0:16:30.57:0,31,1761	0/0:33,0:33:27.14:0,27,1344	0/0:26,0:26:57.16:0,57,3615	0/0:26,0:24:33.72:0,34,2049	0/0:15,0:15:15.14:0,15,1528	0/0:38,0:38:51.18:0,51,3832	0/0:18,0:18:14.75:0,15,1194	0/0:25,0:25:48.15:0,48,3658	0/0:34,0:34:69.07:0,69,4265	0/0:14,0:14:2.95:0,3,19	0/0:16,0:16:39.13:0,39,2140	0/0:19,0:18:35.84:0,36,2675	0/0:11,0:11:24.08:0,24,2049
chr10	84852698	.	CACACACACACAG	C	302.56	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=0.799;DP=694;FS=8.313;HRun=0;HaplotypeScore=209.2794;InbreedingCoeff=0.2837;MQ=52.68;MQ0=31;MQRankSum=-0.919;QD=1.31;ReadPosRankSum=-4.969;VQSLOD=0.5493;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:46,0:46:29.10:29,0,881	0/1:11,0:11:37.43:37,0,461	1/1:45,0:11:5.95:73,6,0	0/1:43,0:12:24.61:30,0,25	0/0:14,0:13:30.08:0,30,1425	0/0:18,0:18:37.76:0,38,1260	1/1:24,0:24:9.02:146,9,0	0/0:42,0:38:38.46:0,38,1181	0/0:26,0:25:54.47:0,54,2523	0/0:24,0:22:6.45:0,6,1134	0/1:16,0:16:8.80:9,0,232	0/0:29,0:29:52.08:0,52,3296	0/0:16,0:16:35.19:0,35,1355	0/0:28,0:27:63.15:0,63,2637	0/0:28,0:28:65.85:0,66,2497	0/1:18,0:18:20.12:20,0,921	0/0:34,0:34:9.19:0,9,731	0/0:24,0:24:57.14:0,57,2041	0/0:24,0:21:34.06:0,34,1106	0/1:16,0:16:0.05:0,0,920	0/0:39,0:39:51.16:0,51,2215	0/0:17,0:17:12.61:0,13,687	0/0:22,0:22:45.14:0,45,2176	0/0:30,0:30:68.85:0,69,2332	1/1:1,11:12:3.01:105,3,0	0/0:19,0:18:48.05:0,48,1272	0/0:19,0:18:34.48:0,34,1617	0/0:10,0:10:30.09:0,30,1334
chr10	84852710	.	GAC	G	98.39	PASS	AB=0.988;AC=12;AF=0.214;AN=56;BaseQRankSum=0.506;DP=720;FS=0.000;HRun=0;HaplotypeScore=122.3929;InbreedingCoeff=-0.1098;MQ=54.40;MQ0=28;MQRankSum=-0.259;QD=0.37;ReadPosRankSum=-2.357;VQSLOD=1.7711;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:44:13.37:13,0,35	0/0:9,0:11:11.03:0,11,83	0/0:40,0:12:10.52:0,11,104	0/0:44,0:13:17.22:0,17,123	0/0:19,0:18:36.11:0,36,536	0/0:21,3:24:32.30:0,32,442	0/1:22,0:22:7.80:8,0,12	0/0:45,0:41:11.84:0,12,161	0/0:30,0:29:62.84:0,63,912	0/0:23,0:23:24.54:0,25,174	0/0:16,0:16:5.21:0,5,30	0/1:28,0:28:13.72:14,0,713	0/1:14,0:14:30.88:31,0,356	0/1:24,0:23:30.16:30,0,610	0/0:25,0:25:51.17:0,51,784	0/0:14,0:17:20.94:0,21,174	0/0:32,0:33:14.56:0,15,70	0/1:18,3:21:64.96:65,0,354	0/1:27,0:25:3.54:4,0,172	0/0:20,0:20:14.83:0,15,100	0/0:38,0:38:29.76:0,30,227	0/0:21,0:21:14.71:0,15,94	0/0:20,4:24:38.82:0,39,610	0/1:32,0:32:32.82:33,0,573	1/1:11,0:11:2.68:11,3,0	0/1:25,0:24:5.20:5,0,499	0/0:23,0:22:26.45:0,26,185	0/1:16,0:16:25.51:26,0,522
chr10	84852730	.	C	CAG	3440.94	PASS	AB=0.849;AC=13;AF=0.232;AN=56;BaseQRankSum=-6.235;DP=705;FS=6.148;HRun=0;HaplotypeScore=111.5383;InbreedingCoeff=0.7496;MQ=58.86;MQ0=17;MQRankSum=0.726;QD=16.54;ReadPosRankSum=-1.772;VQSLOD=3.1870;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:64.64:0,65,479	0/1:7,0:7:2.82:3,0,18	0/0:31,0:13:37.90:0,38,408	0/0:38,0:17:33.64:0,34,453	0/0:21,0:21:45.08:0,45,598	0/0:24,0:24:40.33:0,40,546	0/0:27,0:27:26.83:0,27,215	1/1:14,29:41:68.84:1247,69,0	0/0:27,0:26:69.19:0,69,979	0/0:25,0:24:17.76:0,18,359	0/0:16,0:16:0.35:0,0,134	0/0:26,0:26:63.50:0,64,835	0/0:13,0:13:32.08:0,32,455	0/0:24,0:23:65.86:0,66,801	0/0:23,0:23:60.16:0,60,841	0/0:18,0:18:7.29:0,7,213	0/0:30,0:30:44.33:0,44,300	0/0:22,0:21:46.35:0,46,589	1/1:20,3:22:21.47:688,21,0	1/1:2,17:19:17.12:303,17,0	1/1:6,40:46:13.41:480,13,0	1/1:1,22:24:15.05:289,15,0	0/0:28,0:28:56.40:0,56,730	0/1:23,0:23:0.33:0,0,681	0/0:20,0:20:26.88:0,27,212	0/0:28,0:28:62.06:0,62,817	0/1:4,19:22:1.62:431,0,2	0/0:17,0:17:51.01:0,51,649
chr10	84853636	.	C	CGT	1875.44	PASS	AB=0.772;AC=15;AF=0.268;AN=56;BaseQRankSum=-7.570;DP=653;FS=0.551;HRun=0;HaplotypeScore=104.0457;InbreedingCoeff=0.3961;MQ=64.62;MQ0=2;MQRankSum=0.482;QD=8.85;ReadPosRankSum=0.874;VQSLOD=3.0565;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:28:3.01:41,3,0	0/1:3,4:8:2.09:131,0,2	0/0:30,0:26:30.99:0,31,347	0/0:23,0:19:10:0,10,267	0/0:26,1:29:9.41:0,9,537	0/0:26,0:26:48.09:0,48,533	1/1:21,0:21:0.58:2,1,0	0/1:22,1:25:8.84:9,0,321	0/0:31,0:33:60.27:0,60,634	1/1:8,10:18:0.57:480,1,0	1/1:3,11:14:21.07:333,21,0	0/0:28,0:30:71.80:0,72,776	0/0:29,0:29:33.10:0,33,390	0/0:26,0:27:39.03:0,39,427	0/0:25,0:27:44.79:0,45,479	0/1:9,12:21:56.47:436,0,56	0/1:15,18:34:99:561,0,129	0/0:22,0:24:59.85:0,60,667	0/0:16,0:17:23.73:0,24,231	0/0:13,0:13:23.90:0,24,263	0/0:51,0:54:99:0,129,1411	0/0:16,0:18:38.90:0,39,415	0/0:12,0:13:23.76:0,24,231	0/0:24,0:25:56.96:0,57,619	1/1:22,0:22:2.99:24,3,0	0/1:19,1:20:11.59:12,0,308	0/0:10,0:15:33.84:0,34,325	0/0:6,0:7:14.88:0,15,156
chr10	84853795	.	TAAAA	T	402.99	PASS	AB=0.682;AC=3;AF=0.054;AN=56;BaseQRankSum=6.791;DP=520;FS=0.000;HRun=16;HaplotypeScore=97.9851;InbreedingCoeff=0.6421;MQ=74.23;MQ0=2;MQRankSum=-0.882;QD=8.40;ReadPosRankSum=5.103;VQSLOD=-0.4751;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,24:33:38.83:497,39,0	0/0:4,0:4:9.01:0,9,147	0/0:22,0:16:30.09:0,30,470	0/0:16,0:15:9.27:0,9,233	0/0:13,0:15:30.06:0,30,493	0/0:21,0:22:48.12:0,48,837	0/0:18,0:18:39.11:0,39,738	0/0:25,0:28:57.13:0,57,960	0/0:20,0:20:42.14:0,42,830	0/0:27,0:28:48.13:0,48,814	0/0:17,0:17:42.12:0,42,728	0/0:16,0:16:33.11:0,33,664	0/0:16,0:17:42.14:0,42,789	0/0:13,0:13:33.10:0,33,637	0/0:21,0:22:54.18:0,54,1006	0/0:20,0:21:42.14:0,42,835	0/0:17,0:18:45.62:0,46,771	0/0:17,0:19:51.17:0,51,1052	0/0:15,0:16:33.11:0,33,654	0/0:19,0:19:48.16:0,48,960	0/0:17,0:21:25.88:0,26,432	0/0:19,0:19:48.15:0,48,1019	0/0:16,0:17:26.37:0,26,454	0/0:18,0:21:50.97:0,51,889	0/1:8,0:15:5.49:5,0,29	0/0:20,0:20:45.14:0,45,808	0/0:8,0:9:24.05:0,24,390	0/0:9,0:9:18.03:0,18,294
chr10	84854449	.	GCACACACA	G	1922.63	PASS	AB=0.882;AC=9;AF=0.167;AN=54;BaseQRankSum=4.386;DP=563;FS=6.731;HRun=0;HaplotypeScore=128.8304;InbreedingCoeff=0.6605;MQ=64.50;MQ0=28;MQRankSum=-4.740;QD=24.03;ReadPosRankSum=0.635;VQSLOD=2.5621;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:0:0,0,0	1/1:10,0:10:8.22:171,8,0	0/0:47,0:15:3.01:0,3,35	./.	0/0:12,0:11:21.07:0,21,583	0/0:22,0:23:38.49:0,38,1186	0/0:23,0:23:3.48:0,3,69	0/0:30,0:29:24.08:0,24,514	0/0:13,0:12:12.04:0,12,398	1/1:21,1:20:33.10:665,33,0	1/1:13,2:16:9.97:215,10,0	0/0:13,0:13:27.09:0,27,979	0/0:11,0:12:22.61:0,23,555	0/0:23,0:22:27.08:0,27,765	0/0:21,0:21:27.09:0,27,961	0/1:13,1:15:85.30:604,0,85	1/1:16,1:16:18.06:419,18,0	0/0:23,0:20:24.08:0,24,837	0/0:20,0:20:17.26:0,17,346	0/0:18,0:17:24.55:0,25,851	0/0:19,0:19:24.07:0,24,632	0/0:13,0:12:6.02:0,6,157	0/0:12,0:12:18.06:0,18,579	0/0:39,0:39:62.24:0,62,2002	0/0:14,0:14:9.03:0,9,257	0/0:13,0:12:20.16:0,20,480	0/0:16,0:16:21.07:0,21,697	0/0:1,0:1:3.01:0,3,124
chr10	84854451	.	A	ACACACATGCG	182.32	PASS	AB=0.919;AC=5;AF=0.089;AN=56;BaseQRankSum=4.836;DP=579;FS=2.626;HRun=0;HaplotypeScore=176.1111;InbreedingCoeff=0.0085;MQ=56.89;MQ0=29;MQRankSum=-3.837;QD=1.92;ReadPosRankSum=-2.203;VQSLOD=2.6922;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,18:31:0:1,0,0	0/0:10,0:10:6.99:0,7,315	0/0:44,0:12:27.56:0,28,505	0/0:42,0:11:17.92:0,18,298	0/0:13,0:12:29.87:0,30,715	0/0:26,0:26:47.34:0,47,1361	0/0:22,0:22:3.70:0,4,18	0/0:29,0:28:64.30:0,64,1177	0/0:13,0:12:15.05:0,15,388	0/0:22,0:20:60.19:0,60,1358	0/0:15,0:15:21.54:0,22,504	0/0:14,0:14:32.88:0,33,905	0/0:16,0:16:25.31:0,25,655	0/0:26,0:25:43.34:0,43,1069	0/0:22,0:22:48.64:0,49,1160	0/0:17,0:17:45.14:0,45,1124	0/0:17,0:16:30.10:0,30,719	0/0:25,0:21:42.09:0,42,1039	0/1:21,0:20:59.61:60,0,417	0/0:21,0:20:14.98:0,15,285	0/0:20,0:19:5.47:0,5,471	0/1:12,0:11:12.46:12,0,114	0/0:14,0:14:27.35:0,27,654	0/0:41,0:41:96.28:0,96,2351	0/1:14,0:14:34.57:188,0,35	0/0:13,0:12:30.09:0,30,731	0/1:16,0:16:28.91:29,0,244	0/0:2,0:2:3.01:0,3,96
chr10	84854455	.	A	ACACGCG	223.73	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=4.877;DP=578;FS=2.172;HRun=0;HaplotypeScore=148.5113;InbreedingCoeff=0.1367;MQ=50.62;MQ0=36;MQRankSum=-3.441;QD=1.69;ReadPosRankSum=-0.835;VQSLOD=2.5830;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:29:0.08:0,0,0	0/0:9,0:9:15.94:0,16,260	0/0:42,0:10:27.09:0,27,479	0/0:39,0:8:17.70:0,18,262	0/0:13,0:12:26.75:0,27,501	0/0:26,0:26:50.29:0,50,1012	0/0:11,11:21:3.48:0,3,36	0/0:28,0:27:50.44:0,50,978	0/0:13,0:12:14.92:0,15,324	0/0:25,0:22:62.48:0,62,981	0/0:12,0:12:21.54:0,22,357	0/0:13,0:13:32.79:0,33,702	0/0:17,0:17:22.67:0,23,454	0/0:27,0:26:47.92:0,48,848	0/0:23,0:23:50.92:0,51,879	0/0:17,0:17:45.12:0,45,786	0/0:18,0:16:30.47:0,30,490	0/0:24,0:19:45.11:0,45,852	0/1:20,0:19:75.30:75,0,327	0/1:22,0:21:4.66:5,0,166	0/1:21,0:19:22.31:22,0,329	0/1:12,0:11:26.14:26,0,86	0/0:16,0:16:29.32:0,29,516	0/0:43,0:42:95.72:0,96,1853	1/1:11,0:11:4.23:135,4,0	0/0:16,0:14:33.10:0,33,588	0/1:15,0:15:82.76:83,0,181	0/0:2,0:2:6.02:0,6,110
chr10	84854478	.	CACACACACAGAG	C	2582.18	PASS	AB=0.863;AC=9;AF=0.167;AN=54;BaseQRankSum=4.614;DP=534;FS=1.410;HRun=0;HaplotypeScore=173.2756;InbreedingCoeff=0.2867;MQ=41.86;MQ0=36;MQRankSum=-6.742;QD=20.66;ReadPosRankSum=-1.798;VQSLOD=2.2508;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:22:0.59:3,1,0	0/1:7,1:7:2.04:205,0,2	0/0:12,0:1:3.01:0,3,35	./.	0/0:17,0:16:24.02:0,24,684	0/0:27,0:26:20.80:0,21,1496	0/1:19,0:17:1.15:1,0,62	0/0:12,0:11:30.98:0,31,613	0/0:14,0:13:26.73:0,27,678	0/1:19,6:21:99:976,0,114	1/1:11,2:13:10.11:234,10,0	0/0:17,0:17:34.83:0,35,1188	0/0:18,0:18:32.58:0,33,802	0/0:26,0:25:39.52:0,40,1114	0/0:16,0:16:32.78:0,33,1372	0/1:14,4:18:99:756,0,174	0/1:12,4:14:99:533,0,106	0/0:22,0:16:34.36:0,34,1128	0/0:20,0:19:45.44:0,45,810	0/0:24,0:23:27.56:0,28,920	0/0:25,0:21:36.41:0,36,927	0/0:17,0:16:14.35:0,14,311	0/0:17,0:17:23.39:0,23,831	0/0:49,0:47:55.57:0,56,2657	0/0:11,0:11:9.03:0,9,208	0/0:17,0:15:38.17:0,38,957	0/0:16,0:16:24.55:0,25,779	0/0:7,0:7:21.02:0,21,441
chr10	84854496	.	GAGAGAGAGAA	G	151.23	PASS	AB=0.963;AC=14;AF=0.269;AN=52;BaseQRankSum=4.581;DP=489;FS=75.081;HRun=0;HaplotypeScore=188.9179;InbreedingCoeff=-0.0450;MQ=43.23;MQ0=30;MQRankSum=-1.717;QD=0.62;ReadPosRankSum=1.583;VQSLOD=0.1839;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:20:2.76:25,3,0	0/0:5,0:4:1.58:0,2,57	./.	./.	0/0:22,0:21:24.82:0,25,499	0/1:29,0:28:1.54:2,0,920	0/0:15,0:13:7.27:0,7,36	0/0:11,0:11:24.01:0,24,318	0/0:16,0:15:4.43:0,4,916	0/1:26,0:22:64.93:65,0,666	1/1:15,0:15:1.61:23,2,0	0/0:20,0:20:12.12:0,12,697	0/1:16,0:16:0.63:1,0,399	0/1:24,0:22:5.21:5,0,737	0/0:20,0:20:35.14:0,35,771	0/1:20,0:20:55.63:56,0,143	0/1:15,0:14:44.30:44,0,313	0/1:25,0:19:9.85:10,0,711	0/0:21,0:20:15.94:0,16,834	0/1:22,0:20:42.99:43,0,330	0/0:20,0:17:2.79:0,3,611	0/0:14,0:13:8.38:0,8,498	0/0:18,0:18:19.22:0,19,548	0/0:39,0:36:0.72:0,1,1781	0/1:5,7:12:0:0,0,0	0/0:18,0:15:29.96:0,30,736	0/1:15,0:15:5.16:5,0,525	0/0:7,0:7:21.03:0,21,683
chr10	84854506	.	A	AAG	390.21	PASS	AB=1.000;AC=19;AF=0.380;AN=50;BaseQRankSum=3.470;DP=497;FS=4.255;HRun=0;HaplotypeScore=144.3484;InbreedingCoeff=0.5128;MQ=42.73;MQ0=29;MQRankSum=-0.884;QD=2.12;ReadPosRankSum=-0.947;VQSLOD=2.5351;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:21:0.29:0,0,0	1/1:5,0:4:2.94:18,3,0	./.	./.	0/0:22,0:21:23.73:0,24,194	0/0:26,0:25:23.26:0,23,213	0/1:16,0:14:14.08:35,0,14	1/1:12,0:12:0.47:1,0,0	0/1:16,0:15:24.59:25,0,154	1/1:30,0:26:1.56:90,2,0	1/1:16,0:16:2.08:23,2,0	0/0:22,0:22:15.83:0,16,193	0/0:19,0:19:7.96:0,8,72	0/0:25,0:24:26.31:0,26,265	0/0:21,0:21:20.42:0,20,210	1/1:17,0:17:4.80:41,5,0	1/1:15,0:14:11.88:89,12,0	0/0:28,0:22:19.42:0,19,166	0/0:21,0:20:14.83:0,15,146	0/0:17,0:16:11.50:0,12,111	0/0:19,0:16:25.80:0,26,204	0/0:13,0:12:11.75:0,12,114	0/1:17,0:17:4.50:4,0,101	0/0:39,0:36:15.91:0,16,389	./.	1/1:9,6:12:15.94:216,16,0	0/0:14,0:14:19.25:0,19,184	0/0:8,0:8:12.03:0,12,133
chr10	84855248	.	A	AAC	6333.05	PASS	AB=0.950;AC=26;AF=0.464;AN=56;BaseQRankSum=-3.410;DP=904;FS=3.444;HRun=0;HaplotypeScore=144.3041;InbreedingCoeff=0.8601;MQ=59.32;MQ0=32;MQRankSum=0.043;QD=13.80;ReadPosRankSum=-1.842;VQSLOD=4.1454;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:20:7.81:36,8,0	1/1:12,1:12:12.03:144,12,0	0/0:54,0:24:9.52:0,10,172	0/0:47,0:22:20.93:0,21,178	0/0:23,0:21:29.88:0,30,323	0/0:32,0:28:19.56:0,20,363	1/1:34,0:26:5.49:39,5,0	1/1:23,4:22:24.07:361,24,0	0/0:21,0:19:29.96:0,30,327	1/1:32,6:33:43.64:657,44,0	1/1:15,3:17:18.04:266,18,0	0/0:29,0:24:27.09:0,27,391	0/0:19,0:17:36.01:0,36,389	0/0:36,0:34:51.47:0,51,550	0/0:21,0:21:37.27:0,37,404	1/1:18,6:21:42.12:593,42,0	1/1:23,8:29:14.97:702,15,0	0/0:25,0:22:44.01:0,44,545	0/1:24,2:20:14.05:263,0,14	1/1:23,7:29:39.13:594,39,0	1/1:96,19:97:14.40:1582,14,0	1/1:25,13:36:57.16:842,57,0	0/0:26,0:25:48.13:0,48,567	0/0:59,0:58:76.17:0,76,1048	0/1:18,0:13:0.01:0,0,0	0/0:39,0:36:87.23:0,87,1014	1/1:11,4:15:18.03:254,18,0	0/0:11,0:11:27.08:0,27,325
chr10	84855462	.	C	CCA	1516.77	PASS	AB=0.968;AC=17;AF=0.327;AN=52;BaseQRankSum=2.388;DP=1991;DS;FS=3.133;HRun=0;HaplotypeScore=291.0258;InbreedingCoeff=-0.3748;MQ=23.62;MQ0=561;MQRankSum=-0.953;QD=1.18;ReadPosRankSum=-2.411;VQSLOD=2.0345;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:80,0:43:57.64:58,0,154	0/1:19,0:11:19.37:37,0,19	./.	./.	0/0:37,0:26:3.15:0,3,46	0/0:50,0:21:7.90:0,8,81	0/1:159,0:82:7.53:8,0,146	0/1:133,3:17:90.73:91,0,156	0/0:76,0:47:44.86:0,45,487	0/1:94,1:35:99:209,0,286	1/1:26,5:24:4.14:323,4,0	0/1:80,0:52:42.45:42,0,203	0/0:58,0:27:11.91:0,12,332	0/0:72,0:43:18:0,18,318	0/0:65,0:33:26.61:0,27,281	0/1:35,2:21:63.80:143,0,64	0/1:55,3:35:99:153,0,239	0/0:75,0:44:56.04:0,56,565	0/1:139,2:17:78.20:78,0,146	0/1:26,2:16:53.49:133,0,53	0/1:230,4:129:99:117,0,105	0/1:45,3:25:55.71:134,0,56	0/1:40,1:21:51.18:51,0,98	0/0:129,0:77:13.05:0,13,726	0/1:45,0:23:14.21:14,0,27	0/0:106,0:40:6.63:0,7,389	0/1:27,1:17:76.87:77,0,98	0/0:27,0:15:12.03:0,12,145
chr10	84855704	.	GGA	G	3110.50	PASS	AB=0.865;AC=16;AF=0.286;AN=56;BaseQRankSum=3.273;DP=751;FS=10.263;HRun=0;HaplotypeScore=116.1471;InbreedingCoeff=0.4440;MQ=60.41;MQ0=3;MQRankSum=1.795;QD=10.51;ReadPosRankSum=0.816;VQSLOD=2.8277;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,21:35:62.76:764,63,0	1/1:10,7:17:17.89:196,18,0	0/0:31,0:20:21.37:0,21,341	0/0:44,0:30:29.85:0,30,473	0/0:21,0:21:42.14:0,42,671	0/1:14,2:14:36.69:37,0,424	0/0:8,0:18:41.96:0,42,371	0/0:23,0:30:42.11:0,42,374	0/1:32,4:36:82.41:82,0,730	1/1:7,27:33:74.86:837,75,0	1/1:7,9:15:27.07:316,27,0	0/0:23,1:24:17.81:0,18,776	0/1:29,1:30:36.33:36,0,913	0/0:38,0:38:78.25:0,78,1233	0/0:22,0:21:37.05:0,37,735	0/1:11,16:27:22.16:495,0,22	1/1:5,16:23:44.63:479,45,0	0/1:21,2:24:20.77:21,0,783	0/0:21,0:25:23.41:0,23,227	0/0:5,0:18:33:0,33,311	0/0:26,0:53:69.05:0,69,735	0/0:9,0:22:30.01:0,30,294	0/0:20,1:23:2.21:0,2,652	0/0:39,1:40:20.68:0,21,1278	0/0:11,0:13:14.97:0,15,129	0/1:30,2:33:35.77:36,0,530	0/0:5,0:16:22.20:0,22,245	0/0:14,0:14:33.11:0,33,524
chr10	84856096	.	T	TA	4255.83	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-2.210;DP=559;FS=5.547;HRun=9;HaplotypeScore=59.2197;InbreedingCoeff=0.9858;MQ=67.13;MQ0=0;MQRankSum=1.992;QD=19.61;ReadPosRankSum=-0.893;VQSLOD=4.8428;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,3:42:91.55:516,92,0	0/0:7,0:7:21:0,21,182	0/0:10,0:10:13.80:0,14,106	0/0:7,0:6:9:0,9,78	0/0:25,0:25:71.98:0,72,625	0/0:22,0:22:59.99:0,60,521	1/1:4,0:24:42.29:207,42,0	1/1:7,33:40:96.70:1045,97,0	0/0:19,0:19:47.95:0,48,413	0/0:20,0:20:44.98:0,45,391	0/0:21,0:21:56.98:0,57,495	0/0:20,0:20:47.95:0,48,411	0/0:18,0:18:47.98:0,48,416	0/0:15,0:15:32.98:0,33,287	0/0:14,0:14:35.99:0,36,310	0/0:22,0:22:59.96:0,60,517	0/0:26,0:26:65.95:0,66,565	0/0:26,0:26:62.96:0,63,541	1/1:5,24:29:72.17:783,72,0	1/1:1,15:16:39.11:431,39,0	1/1:2,8:10:21.06:232,21,0	1/1:4,13:17:36.10:397,36,0	0/0:12,0:12:23.99:0,24,208	0/0:11,0:11:29.98:0,30,257	1/1:0,1:19:42.61:213,43,0	0/0:26,0:26:74.98:0,75,651	1/1:2,18:20:38.94:431,39,0	0/0:21,0:21:62.99:0,63,547
chr10	84857243	.	GGT	G	296.83	PASS	AB=0.956;AC=15;AF=0.288;AN=52;BaseQRankSum=3.165;DP=718;FS=7.175;HRun=0;HaplotypeScore=103.2924;InbreedingCoeff=0.0087;MQ=52.31;MQ0=34;MQRankSum=0.933;QD=0.93;ReadPosRankSum=-1.235;VQSLOD=0.7788;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:39:93.37:93,0,127	0/0:7,0:7:3.01:0,3,39	./.	./.	0/0:16,0:16:3.01:0,3,40	0/1:12,2:13:20.12:20,0,120	0/0:33,0:32:9.03:0,9,126	0/0:34,0:29:2.22:0,2,7	0/0:27,0:26:6.02:0,6,88	0/0:22,0:26:35.87:0,36,344	0/0:11,0:14:5.34:0,5,50	0/1:25,0:25:15.78:16,0,38	0/1:18,0:17:39.34:39,0,199	0/1:27,0:29:8.95:9,0,92	0/1:21,0:20:17.52:18,0,120	0/0:22,0:24:20.99:0,21,193	0/0:21,0:27:24.48:0,24,234	0/1:34,9:43:99:116,0,371	0/1:23,0:20:7.67:8,0,8	1/1:12,0:18:2.92:24,3,0	1/1:38,0:38:11.26:56,11,0	0/1:22,0:24:14.27:19,0,14	0/0:11,0:9:3.01:0,3,44	0/0:22,0:21:27.05:0,27,372	0/0:24,0:22:18.06:0,18,250	0/0:27,0:26:11.93:0,12,148	1/1:22,0:21:5.72:28,6,0	0/0:16,0:13:15.05:0,15,217
chr10	84857785	.	TC	T	8397.14	PASS	AB=0.800;AC=53;AF=0.946;AN=56;BaseQRankSum=-0.650;DP=286;FS=8.232;HRun=4;HaplotypeScore=133.7625;InbreedingCoeff=0.6247;MQ=44.02;MQ0=1;MQRankSum=-3.419;QD=29.88;ReadPosRankSum=2.737;VQSLOD=3.2218;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:33.10:380,33,0	1/1:0,5:5:15.04:174,15,0	0/1:3,1:2:3.68:4,0,15	0/0:5,0:4:9.02:0,9,103	1/1:0,22:22:51.15:584,51,0	1/1:0,15:15:39.12:452,39,0	1/1:0,8:8:21.06:241,21,0	1/1:0,9:9:27.08:321,27,0	1/1:0,6:6:15.04:174,15,0	1/1:1,19:20:54.16:639,54,0	1/1:0,12:12:30.07:342,30,0	1/1:1,3:4:12.02:127,12,0	1/1:0,6:6:15.04:172,15,0	1/1:0,9:9:27.08:311,27,0	1/1:1,13:14:30.09:347,30,0	1/1:0,14:14:42.12:482,42,0	1/1:0,7:6:18.05:208,18,0	1/1:0,7:7:18.05:213,18,0	1/1:1,5:6:18.01:195,18,0	1/1:0,16:16:48.14:553,48,0	1/1:0,5:3:6.02:69,6,0	1/1:0,15:15:36.07:414,36,0	1/1:0,13:13:33.10:379,33,0	1/1:0,8:8:14.89:171,15,0	1/1:0,8:8:21.06:242,21,0	1/1:0,14:14:42.12:493,42,0	1/1:1,15:16:48.11:537,48,0	1/1:0,5:5:15.04:175,15,0
chr10	84857791	.	TC	T	9769.96	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.158;DP=308;FS=10.663;HRun=2;HaplotypeScore=140.9296;InbreedingCoeff=0.8463;MQ=47.68;MQ0=1;MQRankSum=-4.189;QD=32.90;ReadPosRankSum=2.579;VQSLOD=3.1588;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:36.11:450,36,0	1/1:0,5:5:15.05:189,15,0	0/0:6,0:4:9.03:0,9,126	0/0:5,0:4:8.96:0,9,87	1/1:0,23:23:51.16:634,51,0	1/1:0,15:15:39.12:490,39,0	1/1:0,8:8:21.06:262,21,0	1/1:0,10:10:30.10:386,30,0	1/1:0,7:7:18.06:227,18,0	1/1:0,21:21:57.18:728,57,0	1/1:0,12:12:30.03:372,30,0	1/1:0,6:6:18.05:216,18,0	1/1:0,6:6:18.06:226,18,0	1/1:0,11:11:33.11:415,33,0	1/1:0,14:14:33.11:415,33,0	1/1:0,16:16:48.15:601,48,0	1/1:0,8:7:21.07:264,21,0	1/1:0,7:7:18.06:230,18,0	1/1:0,7:7:21.05:256,21,0	1/1:0,16:16:48.15:601,48,0	1/1:0,7:5:6.02:74,6,0	1/1:0,16:16:36.03:449,36,0	1/1:0,13:13:33.10:412,33,0	1/1:0,11:11:20.91:263,21,0	1/1:0,8:8:21.07:262,21,0	1/1:0,15:15:45.14:570,45,0	1/1:0,16:16:48.14:586,48,0	1/1:0,5:5:15.05:190,15,0
chr10	84857805	.	TA	T	3578.44	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=3.392;DP=375;FS=1.237;HRun=8;HaplotypeScore=187.6051;InbreedingCoeff=0.4043;MQ=54.35;MQ0=1;MQRankSum=-4.951;QD=9.67;ReadPosRankSum=2.565;VQSLOD=0.6809;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:39.86:217,40,0	1/1:7,0:7:11.33:56,11,0	0/1:16,0:12:16.31:16,0,180	0/0:5,0:4:2.19:0,2,39	1/1:29,0:29:63.87:297,64,0	1/1:13,1:14:34.02:179,34,0	1/1:9,0:9:16.94:81,17,0	1/1:14,0:14:31.16:163,31,0	1/1:10,0:10:16.89:81,17,0	1/1:24,0:24:50.72:227,51,0	1/1:11,0:11:27.59:131,28,0	1/1:9,1:10:22.51:104,23,0	1/1:7,0:7:19.62:92,20,0	1/1:18,0:18:39.06:180,39,0	1/1:11,1:12:22.33:100,22,0	1/1:18,0:17:37.04:200,37,0	1/1:9,0:8:16.98:87,17,0	1/1:11,0:11:19.70:98,20,0	1/1:13,0:13:28.04:132,28,0	1/1:18,0:18:44.50:205,44,0	1/1:11,0:9:19.72:93,20,0	1/1:16,0:16:24.74:111,25,0	1/1:16,0:16:27.23:127,27,0	1/1:14,1:15:24.59:111,25,0	1/1:9,0:9:11.74:72,12,0	1/1:16,0:16:41.79:186,42,0	1/1:18,0:18:36.40:179,36,0	1/1:5,0:5:11.14:50,11,0
chr10	84857812	.	AAG	A	11624.30	PASS	AB=0.760;AC=53;AF=0.946;AN=56;BaseQRankSum=1.866;DP=361;FS=2.605;HRun=0;HaplotypeScore=149.4958;InbreedingCoeff=0.4063;MQ=61.35;MQ0=1;MQRankSum=-5.001;QD=32.65;ReadPosRankSum=3.444;VQSLOD=6.9368;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:42.07:587,42,0	1/1:0,4:4:12.04:171,12,0	0/1:13,6:15:99:140,0,286	0/0:5,0:4:2.21:0,2,44	1/1:2,24:26:71.77:990,72,0	1/1:1,12:13:36.07:504,36,0	1/1:0,9:9:18.01:241,18,0	1/1:2,11:13:39.02:492,39,0	1/1:0,8:8:18.01:241,18,0	1/1:2,20:22:60.17:855,60,0	1/1:0,11:11:33.07:446,33,0	1/1:1,10:11:24:328,24,0	1/1:0,8:8:21:284,21,0	1/1:1,16:17:42.09:596,42,0	1/1:1,11:12:24.06:356,24,0	1/1:2,15:17:38.91:473,39,0	1/1:0,10:9:18.06:265,18,0	1/1:2,8:10:23.93:278,24,0	1/1:4,10:14:33.06:447,33,0	1/1:1,16:17:51.05:703,51,0	1/1:7,7:12:29.92:348,30,0	1/1:2,12:14:32.98:435,33,0	1/1:0,14:14:30.04:436,30,0	1/1:1,15:16:30.05:418,30,0	1/1:1,7:8:13.03:252,13,0	1/1:1,15:16:47.91:653,48,0	1/1:1,13:14:38.99:507,39,0	1/1:0,4:4:12.04:178,12,0
chr10	84858437	.	G	GC	13453.52	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-15.661;DP=644;FS=5.391;HRun=1;HaplotypeScore=64.2578;InbreedingCoeff=0.9978;MQ=87.91;MQ0=0;MQRankSum=-3.001;QD=40.16;ReadPosRankSum=1.350;VQSLOD=5.5491;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:96.33:1436,96,0	1/1:0,6:6:15.05:225,15,0	0/0:21,0:21:60.18:0,60,761	0/0:31,0:30:83.39:0,83,1025	0/0:26,0:26:78.25:0,78,1011	0/0:19,0:19:57.18:0,57,737	1/1:2,22:24:60.20:899,60,0	1/1:0,16:16:48.15:696,48,0	0/0:25,0:25:69.22:0,69,896	1/1:0,24:24:69.23:1034,69,0	1/1:1,21:23:60.20:898,60,0	0/0:22,0:22:66.20:0,66,843	0/0:18,0:18:54.18:0,54,701	0/0:21,0:21:63.20:0,63,816	0/0:33,0:33:96.31:0,96,1246	1/1:0,32:32:90.30:1349,90,0	1/1:2,28:30:75.25:1124,75,0	0/0:15,0:15:42.14:0,42,545	1/1:2,21:23:63.21:938,63,0	1/1:1,16:17:45.14:673,45,0	1/1:3,29:32:81.27:1214,81,0	1/1:0,26:26:69.23:1033,69,0	0/0:18,0:18:54.18:0,54,700	0/0:20,0:20:60.18:0,60,764	1/1:1,17:18:48.16:720,48,0	0/0:23,0:23:63.20:0,63,818	1/1:1,28:29:81.27:1214,81,0	0/0:16,0:16:48.13:0,48,603
chr10	84858574	.	TGAGATC	T	1237.68	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.112;DP=613;FS=13.153;HRun=0;HaplotypeScore=134.9445;InbreedingCoeff=0.9983;MQ=86.25;MQ0=1;MQRankSum=-7.294;QD=47.60;ReadPosRankSum=-0.088;VQSLOD=3.1744;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,17:26:65:1333,65,0	0/0:9,0:9:27.09:0,27,949	0/0:27,0:27:78.22:0,78,2568	0/0:17,0:17:48.16:0,48,1496	0/0:24,0:24:72.25:0,72,2710	0/0:26,0:25:72.23:0,72,2441	0/0:22,0:22:66.23:0,66,2333	0/0:23,0:23:66.23:0,66,2442	0/0:13,0:13:39.13:0,39,1468	0/0:34,0:34:99:0,99,3684	0/0:22,0:22:66.23:0,66,2420	0/0:24,0:24:72.25:0,72,2647	0/0:21,0:21:63.20:0,63,2278	0/0:18,0:18:54.19:0,54,1997	0/0:18,0:18:54.19:0,54,1893	0/0:17,0:17:51.18:0,51,1888	0/0:30,0:30:90.31:0,90,3388	0/0:26,0:26:78.27:0,78,2706	0/0:21,0:21:63.22:0,63,2272	0/0:18,0:18:54.19:0,54,1968	0/0:28,0:28:84.27:0,84,3022	0/0:13,0:13:39.13:0,39,1436	0/0:19,0:19:57.20:0,57,2080	0/0:25,0:25:75.26:0,75,2824	0/0:20,0:20:60.21:0,60,2196	0/0:31,0:31:93.30:0,93,3280	0/0:31,0:31:93.32:0,93,3484	0/0:10,0:10:30.10:0,30,1128
chr10	84859097	.	ATTT	A	1084.59	PASS	AB=0.769;AC=13;AF=0.232;AN=56;BaseQRankSum=0.574;DP=451;FS=2.840;HRun=14;HaplotypeScore=85.5540;InbreedingCoeff=0.7299;MQ=70.29;MQ0=0;MQRankSum=-2.695;QD=11.30;ReadPosRankSum=0.504;VQSLOD=1.2641;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:16:39.06:0,39,558	0/0:3,0:8:14.96:0,15,121	0/0:26,0:21:31.27:0,31,366	0/0:10,1:6:9.03:0,9,143	0/0:17,0:17:39.99:0,40,582	0/0:21,0:21:54.08:0,54,714	0/0:13,0:18:45.12:0,45,366	1/1:1,6:7:0.47:141,0,0	0/0:15,0:16:45:0,45,598	0/0:11,0:21:52.65:0,53,501	0/0:11,0:12:19.33:0,19,157	0/0:17,0:18:38.28:0,38,500	0/0:17,0:17:42.04:0,42,645	0/0:17,0:17:44.97:0,45,475	0/0:15,0:15:39.11:0,39,639	0/0:9,0:15:32.95:0,33,300	0/0:13,0:24:55.12:0,55,441	0/0:17,0:20:57.09:0,57,889	1/1:9,15:24:4.89:433,5,0	0/1:7,3:10:9.27:70,0,9	1/1:4,11:15:3.34:188,3,0	1/1:4,4:9:2.42:46,2,0	0/0:12,0:13:14.98:0,15,206	0/0:25,0:25:57.12:0,57,858	1/1:4,9:13:17.72:157,18,0	0/0:16,0:18:45.07:0,45,659	1/1:7,11:18:17.91:210,18,0	0/0:7,0:7:18.03:0,18,249
chr10	84860045	.	CAGAG	C	60.70	PASS	AB=0.934;AC=8;AF=0.154;AN=52;BaseQRankSum=5.428;DP=785;FS=26.030;HRun=0;HaplotypeScore=85.2991;InbreedingCoeff=-0.1049;MQ=32.05;MQ0=189;MQRankSum=-4.250;QD=0.27;ReadPosRankSum=-3.885;VQSLOD=-0.6918;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,1:11:4.23:0,4,68	./.	0/0:53,0:6:5.98:0,6,114	0/0:60,2:6:8.81:0,9,84	0/0:10,0:6:6.02:0,6,122	0/0:16,0:12:4.50:0,4,447	0/1:29,2:15:6.86:7,0,111	0/0:25,0:2:6.02:0,6,118	0/0:38,1:31:18.33:0,18,1486	0/1:24,0:10:25.99:26,0,267	./.	0/0:21,1:20:20.94:0,21,485	0/0:24,0:18:32.59:0,33,791	0/0:30,0:28:27.82:0,28,1077	0/0:33,0:26:42.56:0,43,1014	0/1:31,0:19:34.66:35,0,622	0/1:42,0:28:3.63:4,0,988	0/0:42,1:33:11.72:0,12,1311	0/1:21,1:4:42.49:42,0,171	0/0:17,0:4:2.97:0,3,30	0/1:40,5:23:57.22:57,0,182	0/0:12,0:5:3.01:0,3,47	0/0:11,0:7:6.02:0,6,142	0/0:72,0:59:95.23:0,95,2589	1/1:18,0:9:0.99:2,1,0	0/0:21,0:12:27.09:0,27,525	0/0:15,1:9:9.03:0,9,200	0/0:5,0:3:5.98:0,6,70
chr10	84860077	.	G	GGC	41.28	PASS	AB=0.982;AC=8;AF=0.167;AN=48;BaseQRankSum=5.683;DP=772;FS=17.193;HRun=0;HaplotypeScore=100.5360;InbreedingCoeff=-0.0373;MQ=38.63;MQ0=128;MQRankSum=-2.834;QD=0.25;ReadPosRankSum=-2.327;VQSLOD=0.5074;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:10:6.79:7,0,51	./.	0/0:67,0:11:8.18:0,8,256	0/0:73,0:14:34.75:0,35,432	0/0:11,0:7:12.04:0,12,190	0/0:26,0:20:34.66:0,35,506	0/0:46,2:19:7.78:0,8,70	./.	0/0:42,0:37:15.88:0,16,968	0/1:14,0:7:28.53:29,0,81	./.	0/0:30,0:20:12.57:0,13,352	0/0:30,0:25:47.70:0,48,706	0/0:34,0:27:17.57:0,18,617	0/1:33,1:23:14.71:15,0,463	0/1:32,1:22:84.65:85,0,295	0/0:36,1:19:8.77:0,9,401	0/0:44,1:33:10.96:0,11,810	0/0:11,0:1:3.01:0,3,36	0/0:9,0:4:0.06:0,0,0	0/1:39,0:20:8.66:9,0,24	./.	0/0:7,0:5:8.92:0,9,140	0/0:80,2:65:99:0,99,1534	1/1:11,0:6:0.42:1,0,0	0/0:16,0:7:12.04:0,12,185	0/1:13,0:7:4:4,0,31	0/0:3,0:2:3.01:0,3,49
chr10	84860129	.	C	CAG	90.34	PASS	AB=0.985;AC=10;AF=0.200;AN=50;BaseQRankSum=4.114;DP=886;FS=19.151;HRun=0;HaplotypeScore=142.6503;InbreedingCoeff=0.0272;MQ=27.31;MQ0=214;MQRankSum=-3.804;QD=0.28;ReadPosRankSum=-2.807;VQSLOD=0.5365;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,1:17:4.93:48,5,0	1/1:8,0:2:1.25:3,1,0	./.	./.	0/0:15,0:9:12.04:0,12,154	0/0:33,1:26:32.23:0,32,375	0/1:52,1:16:28.55:29,0,143	./.	0/0:46,1:38:66.64:0,67,814	0/0:25,0:9:9.03:0,9,116	0/0:25,0:6:3.01:0,3,38	0/0:35,0:22:46.68:0,47,555	0/0:39,2:29:44.17:0,44,539	0/0:41,0:28:33.92:0,34,399	0/0:41,1:27:28.05:0,28,451	0/1:50,0:25:4.54:5,0,427	0/1:50,0:28:58.22:58,0,237	0/0:48,1:34:58.33:0,58,680	0/1:22,0:8:9.46:9,0,185	0/0:16,0:5:3.01:0,3,39	0/1:74,0:41:20.55:21,0,214	0/0:16,0:5:9.03:0,9,107	0/0:11,0:6:8.97:0,9,94	0/0:86,3:69:91.10:0,91,1054	0/0:20,0:7:2.56:0,3,39	0/1:24,2:10:42.17:42,0,100	0/0:25,1:13:12.08:0,12,124	0/0:6,0:3:3.01:0,3,39
chr10	84860136	.	AGAGG	A	65.88	PASS	AB=0.987;AC=9;AF=0.180;AN=50;BaseQRankSum=4.253;DP=888;FS=11.812;HRun=0;HaplotypeScore=150.2944;InbreedingCoeff=-0.0386;MQ=27.20;MQ0=228;MQRankSum=-5.173;QD=0.27;ReadPosRankSum=-3.325;VQSLOD=0.4246;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,1:14:10.08:10,0,11	1/1:9,0:2:2.99:23,3,0	./.	./.	0/0:13,0:7:12.04:0,12,228	0/0:33,0:24:35.64:0,36,669	0/1:57,0:17:20.24:20,0,257	./.	0/0:47,1:38:13.25:0,13,1478	0/1:25,0:8:0.27:0,0,175	0/1:17,0:4:14.80:15,0,74	0/0:41,0:23:10.38:0,10,1146	0/0:44,1:30:18.32:0,18,1032	0/0:39,1:27:49.81:0,50,948	0/0:44,0:29:45.93:0,46,953	0/0:54,1:28:23.07:0,23,977	0/1:55,1:30:42.73:43,0,522	0/0:47,0:32:69.08:0,69,1296	0/0:25,0:7:17.94:0,18,388	0/0:16,0:4:3.01:0,3,87	0/0:71,2:36:13.31:0,13,450	0/0:19,0:5:7.84:0,8,156	0/0:12,0:6:8.82:0,9,137	0/0:83,0:62:97.20:0,97,2263	0/0:20,0:8:11.97:0,12,142	0/1:25,1:7:52.48:52,0,231	0/1:26,0:13:26.34:26,0,253	0/0:6,0:3:3.01:0,3,87
chr10	84860171	.	GAGAGGC	G	157.68	PASS	AB=0.978;AC=8;AF=0.160;AN=50;BaseQRankSum=5.360;DP=1092;FS=38.317;HRun=0;HaplotypeScore=196.7101;InbreedingCoeff=0.0024;MQ=26.04;MQ0=277;MQRankSum=-3.692;QD=0.48;ReadPosRankSum=-0.908;VQSLOD=1.2734;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:21:23.73:0,24,298	0/0:8,0:4:3.01:0,3,34	./.	./.	0/0:14,0:4:3.01:0,3,80	0/0:26,0:15:21.06:0,21,363	0/1:58,0:22:40.76:41,0,150	./.	0/0:58,0:42:75.72:0,76,1794	0/0:38,0:14:28.44:0,28,549	1/1:14,0:4:4.82:32,5,0	0/1:48,1:33:68.56:69,0,936	0/0:40,0:26:44.07:0,44,1035	0/1:42,1:28:1.25:1,0,1079	0/0:59,0:39:57.60:0,58,1455	0/0:59,1:34:31.76:0,32,1048	0/1:61,1:34:28.02:28,0,586	0/1:54,3:40:76.15:76,0,1457	0/0:40,0:9:27.09:0,27,657	0/0:16,0:9:18.06:0,18,383	0/0:89,0:47:36.92:0,37,857	0/0:21,0:9:7.74:0,8,118	0/0:7,0:3:6.02:0,6,184	0/0:108,0:84:96.12:0,96,2649	0/0:31,0:15:12.04:0,12,345	0/1:43,1:14:33.77:34,0,758	0/0:32,1:22:31.05:0,31,496	0/0:8,0:3:6.02:0,6,174
chr10	84860193	.	C	CAG	2732.12	PASS	AB=0.826;AC=23;AF=0.460;AN=50;BaseQRankSum=1.563;DP=1049;FS=0.000;HRun=0;HaplotypeScore=154.8176;InbreedingCoeff=-0.6409;MQ=26.13;MQ0=258;MQRankSum=-7.166;QD=3.03;ReadPosRankSum=1.698;VQSLOD=2.4676;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:43,7:23:99:269,0,123	0/1:3,3:3:28.14:44,0,28	./.	./.	1/1:9,3:5:3.01:50,3,0	0/1:17,5:12:99:130,0,133	0/0:46,16:23:13.91:0,14,225	./.	0/1:39,14:39:99:149,0,590	0/1:26,11:17:88.22:369,0,88	0/0:9,1:6:2.62:0,3,14	0/1:34,12:34:99:167,0,291	0/1:30,3:24:38.58:39,0,307	0/1:35,5:28:55.63:56,0,388	0/1:45,17:39:99:201,0,355	0/1:42,21:32:60.01:478,0,60	0/1:58,8:31:11.61:12,0,300	0/1:44,14:43:99:112,0,668	0/1:26,5:9:72.92:200,0,73	0/1:9,4:8:62.17:137,0,62	0/1:62,21:48:14.05:14,0,389	1/1:11,6:10:4.20:98,4,0	0/0:8,0:3:6.02:0,6,77	0/1:85,19:74:99:181,0,857	0/1:26,3:17:32.43:32,0,157	0/1:32,2:13:20.47:20,0,302	0/1:22,8:21:99:115,0,285	0/0:5,1:2:2.98:0,3,21
chr10	84860197	.	G	GAGGC	264.76	PASS	AB=0.985;AC=12;AF=0.240;AN=50;BaseQRankSum=7.704;DP=1075;FS=8.941;HRun=0;HaplotypeScore=183.2231;InbreedingCoeff=0.0770;MQ=25.95;MQ0=272;MQRankSum=-5.661;QD=0.84;ReadPosRankSum=3.425;VQSLOD=1.8909;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:23:7.80:0,8,282	0/1:7,0:3:0.73:1,0,41	./.	./.	1/1:11,0:4:0.89:2,1,0	0/0:21,0:10:9.72:0,10,227	0/0:65,0:23:16.32:0,16,338	./.	0/0:53,0:38:32.37:0,32,1073	0/1:36,0:17:15.34:15,0,151	1/1:10,0:6:4.56:45,5,0	0/0:50,0:36:35.26:0,35,613	0/0:35,0:25:3.58:0,4,517	0/0:45,0:30:29.70:0,30,627	0/1:63,0:39:64.62:65,0,660	0/1:66,0:35:99:176,0,118	0/1:73,0:35:70.59:71,0,402	0/0:63,0:47:6.35:0,6,1016	0/1:29,0:9:9.58:10,0,157	0/0:12,0:7:3.75:0,4,111	0/0:84,2:48:35.34:0,35,660	1/1:17,0:9:1.25:4,1,0	0/0:8,0:3:6.02:0,6,116	0/0:108,2:79:77.65:0,78,1497	0/0:26,0:17:14.12:0,14,245	0/0:33,0:13:30.19:0,30,543	0/0:30,1:22:10.68:0,11,480	0/0:6,0:1:3.01:0,3,56
chr10	84860245	.	C	CAG	49.22	PASS	AB=0.972;AC=9;AF=0.196;AN=46;BaseQRankSum=3.530;DP=956;FS=7.333;HRun=0;HaplotypeScore=156.8593;InbreedingCoeff=-0.0376;MQ=23.50;MQ0=339;MQRankSum=-3.003;QD=0.12;ReadPosRankSum=-1.954;VQSLOD=1.8039;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:21:10.57:0,11,186	1/1:9,0:1:0.47:1,0,0	./.	./.	0/0:9,0:3:3.01:0,3,38	0/0:21,0:11:0.47:0,0,1	0/1:45,5:11:64.75:78,0,65	./.	0/1:43,0:30:1.86:2,0,466	0/0:39,0:8:12.92:0,13,156	0/0:14,0:5:6.01:0,6,68	0/0:52,0:28:40.11:0,40,392	0/1:23,1:12:24.72:25,0,68	0/0:34,0:20:23.05:0,23,249	0/0:38,0:16:16.29:0,16,196	0/0:54,1:25:36.12:0,36,463	0/0:69,1:26:1.93:0,2,282	0/1:65,1:35:2.16:2,0,416	0/1:20,0:4:21.61:35,0,22	0/0:8,0:2:3.01:0,3,39	0/1:89,5:48:4.68:5,0,418	0/0:19,0:9:6.74:0,7,51	./.	0/1:106,0:70:1.74:2,0,558	0/0:6,0:3:0.47:0,0,1	0/0:23,0:7:17.54:0,18,202	0/0:34,0:15:20.48:0,20,213	./.
chr10	84860327	.	GT	G	6043.72	PASS	AB=0.977;AC=46;AF=0.958;AN=48;BaseQRankSum=-7.247;DP=412;FS=36.595;HRun=1;HaplotypeScore=83.4806;InbreedingCoeff=-0.0864;MQ=77.42;MQ0=30;MQRankSum=-2.964;QD=14.96;ReadPosRankSum=3.384;VQSLOD=2.7751;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,5:5:9.03:113,9,0	1/1:1,0:1:3:27,3,0	0/1:45,0:27:47.31:47,0,340	0/1:57,3:32:50.47:50,0,244	1/1:1,6:5:9.03:125,9,0	1/1:2,8:10:9.92:127,10,0	./.	./.	1/1:0,14:9:21.07:286,21,0	./.	1/1:2,3:4:3.01:42,3,0	1/1:5,16:14:35.95:460,36,0	1/1:0,14:12:33.11:452,33,0	1/1:3,10:9:21.07:293,21,0	1/1:2,21:13:24.08:327,24,0	1/1:1,16:14:39.07:499,39,0	1/1:1,14:7:21.07:293,21,0	1/1:1,16:12:36.12:502,36,0	1/1:0,5:5:9.03:126,9,0	1/1:0,8:6:3.01:42,3,0	1/1:2,27:29:41.88:562,42,0	1/1:1,6:4:9.03:126,9,0	1/1:0,4:4:9.03:125,9,0	1/1:8,34:27:46.09:631,46,0	1/1:0,4:4:9.03:126,9,0	1/1:2,13:13:36.12:495,36,0	./.	1/1:0,6:4:12.04:168,12,0
chr10	84860334	.	G	GGC	32.98	PASS	AB=0.944;AC=7;AF=0.140;AN=50;BaseQRankSum=2.059;DP=498;FS=8.179;HRun=0;HaplotypeScore=114.8382;InbreedingCoeff=-0.0053;MQ=68.53;MQ0=60;MQRankSum=1.135;QD=0.26;ReadPosRankSum=-2.243;VQSLOD=1.3972;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:11:22.67:23,0,74	1/1:2,0:2:2.98:45,3,0	0/0:39,0:22:11.06:0,11,331	0/0:58,0:32:20.18:0,20,274	0/0:8,0:6:9.03:0,9,146	0/0:13,0:12:9.40:0,9,148	./.	./.	0/0:16,0:11:21.07:0,21,322	0/0:5,0:3:3.01:0,3,38	0/0:8,0:5:3.01:0,3,49	0/0:29,0:21:40.38:0,40,594	0/0:20,0:18:33.10:0,33,513	0/0:14,0:12:24.06:0,24,371	0/1:22,0:14:6.89:7,0,308	0/1:23,2:18:40.46:40,0,403	0/1:19,2:9:20.49:20,0,248	0/0:22,0:17:45.01:0,45,659	0/0:10,1:4:9.03:0,9,146	0/0:13,0:6:3.01:0,3,49	0/1:39,6:31:15.53:16,0,460	0/0:15,0:7:8.98:0,9,134	0/0:7,0:6:9.03:0,9,135	0/0:44,1:32:44.82:0,45,689	0/0:5,0:4:9.03:0,9,147	0/0:17,0:14:36.12:0,36,582	./.	0/0:9,0:5:12.02:0,12,171
chr10	84860508	.	GGC	G	2818.92	PASS	AB=0.794;AC=12;AF=0.214;AN=56;BaseQRankSum=3.620;DP=786;FS=0.483;HRun=0;HaplotypeScore=126.6992;InbreedingCoeff=-0.0594;MQ=36.99;MQ0=134;MQRankSum=-4.208;QD=10.44;ReadPosRankSum=-2.075;VQSLOD=3.1168;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:41,2:34:84.68:85,0,469	0/0:15,0:9:20.94:0,21,400	0/1:10,0:6:43.16:43,0,102	0/1:6,2:5:21.35:21,0,163	0/0:15,0:15:33.11:0,33,625	0/1:17,0:12:23.24:23,0,286	0/0:32,1:18:32.22:0,32,416	0/1:11,17:17:33.12:632,0,33	0/0:30,0:18:39.04:0,39,719	0/0:31,0:16:48.16:0,48,959	0/0:18,0:12:27.09:0,27,450	0/0:32,0:26:48.13:0,48,958	0/0:26,0:21:38.36:0,38,854	0/0:45,0:37:90.31:0,90,1769	0/0:30,0:20:30.42:0,30,795	0/0:36,0:29:53.45:0,53,1417	0/0:52,0:43:28.62:0,29,1572	0/0:38,0:29:22.96:0,23,1059	0/1:14,15:14:18.67:594,0,19	0/1:13,5:9:19.89:251,0,20	0/1:30,26:38:56.10:849,0,56	0/1:14,12:19:99:174,0,141	0/0:19,0:13:36.12:0,36,689	0/0:52,0:42:39.79:0,40,1508	1/1:14,3:10:18.06:260,18,0	0/0:26,1:19:57.16:0,57,995	0/1:12,6:12:43.67:44,0,200	0/0:17,0:14:35.86:0,36,669
chr10	84860510	.	C	CAGAG	216.12	PASS	AB=0.994;AC=10;AF=0.179;AN=56;BaseQRankSum=6.766;DP=775;FS=6.617;HRun=0;HaplotypeScore=155.5516;InbreedingCoeff=-0.0987;MQ=37.65;MQ0=124;MQRankSum=-4.784;QD=0.84;ReadPosRankSum=-5.503;VQSLOD=0.2713;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:33:46.11:0,46,497	0/0:16,0:10:20.91:0,21,349	0/1:15,0:10:43.27:43,0,110	0/1:9,0:5:21.36:21,0,131	0/0:15,0:15:30.10:0,30,517	0/0:18,0:14:16.29:0,16,283	0/1:34,1:20:43.19:43,0,387	0/1:27,0:18:21.84:22,0,247	0/0:29,0:17:1.46:0,1,460	0/0:32,0:17:48.16:0,48,859	0/0:18,0:12:19.30:0,19,359	0/0:32,0:26:45.15:0,45,804	0/0:25,0:20:32.93:0,33,672	0/0:43,0:35:84.20:0,84,1500	0/0:29,0:19:26.56:0,27,511	0/0:34,2:29:1.19:0,1,1126	0/1:49,1:43:45.78:46,0,1185	0/1:34,0:27:35.14:35,0,819	0/0:27,0:14:39.60:0,40,306	0/1:18,0:9:68.36:68,0,99	0/1:52,0:38:57.89:58,0,309	0/0:26,0:19:12.82:0,13,118	0/0:18,0:13:32.85:0,33,570	0/0:51,0:42:76.03:0,76,1310	1/1:16,0:10:1.26:18,1,0	0/0:27,0:20:47.55:0,48,831	0/0:18,0:12:14.47:0,14,200	0/0:16,0:13:33.07:0,33,566
chr10	84860833	.	AATAG	A	502.08	PASS	AB=1.000;AC=10;AF=0.192;AN=52;BaseQRankSum=3.740;DP=615;FS=0.826;HRun=0;HaplotypeScore=125.5013;InbreedingCoeff=0.2212;MQ=52.56;MQ0=8;MQRankSum=1.599;QD=2.99;ReadPosRankSum=1.993;VQSLOD=2.2116;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:15.03:0,15,219	0/0:7,0:7:3.01:0,3,52	./.	./.	0/1:24,0:24:9.05:9,0,645	0/0:20,0:20:27.08:0,27,588	0/0:13,0:13:6.01:0,6,57	0/0:41,0:41:33.67:0,34,288	0/0:32,0:27:27.66:0,28,300	0/1:26,0:22:36.72:217,0,37	0/1:20,0:13:15:48,0,15	0/0:20,0:20:45.13:0,45,954	0/0:19,0:19:42.11:0,42,862	0/0:10,0:9:15.02:0,15,261	1/1:5,13:17:15.05:234,15,0	1/1:17,0:12:3:27,3,0	0/1:15,0:14:14.32:49,0,14	0/0:24,0:23:48.16:0,48,1027	0/0:28,0:26:27.04:0,27,370	0/0:27,0:27:57.14:0,57,905	0/0:18,0:18:30.09:0,30,502	0/1:19,0:19:6.53:54,0,7	0/0:24,0:23:30.10:0,30,683	0/0:28,0:28:54.17:0,54,1171	0/1:27,0:26:4.64:5,0,22	0/0:35,0:33:25.27:0,25,1399	0/0:35,0:35:78.67:0,79,1298	0/0:18,0:17:42.14:0,42,962
chr10	84860873	.	GATAC	G	3041.07	PASS	AB=0.993;AC=20;AF=0.385;AN=52;BaseQRankSum=12.667;DP=674;FS=0.358;HRun=0;HaplotypeScore=152.8214;InbreedingCoeff=0.4905;MQ=50.08;MQ0=25;MQRankSum=-4.623;QD=8.84;ReadPosRankSum=-4.722;VQSLOD=0.9733;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:9.47:0,9,99	0/1:8,0:8:23.57:59,0,24	./.	./.	0/0:33,0:33:54.77:0,55,874	0/0:26,0:26:60.01:0,60,765	0/0:8,0:6:5.91:0,6,38	1/1:43,0:41:26.82:450,27,0	0/1:32,0:26:23.31:23,0,177	1/1:31,9:35:95.93:1004,96,0	1/1:23,8:22:44.97:423,45,0	0/0:23,0:23:63.10:0,63,986	0/0:24,0:24:54.08:0,54,836	0/0:8,0:8:18.01:0,18,243	0/1:25,0:22:72.80:73,0,154	1/1:12,8:14:17.87:178,18,0	1/1:16,2:17:32.52:310,33,0	0/0:28,0:27:77.52:0,78,1042	0/1:23,1:19:99:190,0,103	0/0:21,9:30:45.03:0,45,503	0/1:16,0:16:14.92:15,0,246	1/1:22,0:22:26.53:167,27,0	0/0:21,0:20:51.05:0,51,706	0/0:27,0:26:66.12:0,66,1061	1/1:29,0:28:44.84:267,45,0	0/0:45,0:43:59.19:0,59,1584	0/1:36,0:36:75.53:76,0,651	0/0:23,0:23:69.06:0,69,1006
chr10	84860881	.	CATAG	C	311.44	PASS	AB=0.926;AC=6;AF=0.115;AN=52;BaseQRankSum=6.687;DP=700;FS=9.123;HRun=0;HaplotypeScore=176.8751;InbreedingCoeff=0.1228;MQ=50.02;MQ0=23;MQRankSum=-1.660;QD=2.05;ReadPosRankSum=-0.948;VQSLOD=1.9933;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:11.82:0,12,79	0/0:8,0:8:1.95:0,2,50	./.	./.	0/0:38,0:38:83.03:0,83,1297	0/0:25,0:25:60.21:0,60,1022	0/0:10,0:8:2.96:0,3,19	0/0:43,0:39:22.22:0,22,115	0/1:18,13:25:93.92:94,0,335	0/1:44,0:39:79.71:231,0,80	1/1:30,0:21:4.82:49,5,0	0/0:21,0:21:63.20:0,63,1101	0/0:23,0:23:57.18:0,57,961	0/0:8,0:8:24.05:0,24,353	0/0:26,0:23:32.59:0,33,431	0/1:24,0:17:12.32:12,0,85	0/1:23,0:22:42.89:43,0,60	0/0:28,0:27:72.66:0,73,1119	0/0:20,0:17:17.86:0,18,240	0/0:31,0:31:51.06:0,51,809	0/0:18,0:18:31.95:0,32,483	0/0:20,0:20:24.79:0,25,186	0/0:22,0:21:54.15:0,54,841	0/0:28,0:27:69.22:0,69,1164	0/0:31,0:30:42.55:0,43,312	0/0:44,0:43:99:0,116,1982	0/0:35,0:35:75.62:0,76,1206	0/0:28,0:28:84.17:0,84,1282
chr10	84861053	.	AG	A	1723.09	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.537;DP=708;FS=4.384;HRun=1;HaplotypeScore=76.5452;InbreedingCoeff=0.9997;MQ=82.22;MQ0=0;MQRankSum=-4.032;QD=30.77;ReadPosRankSum=0.297;VQSLOD=3.2461;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:87.29:1216,87,0	0/0:10,0:10:30.10:0,30,480	0/0:19,0:19:54.18:0,54,845	0/0:24,0:24:45.81:0,46,1000	0/0:26,0:26:78.25:0,78,1223	0/0:35,0:35:99:0,102,1628	1/1:0,20:20:45.15:629,45,0	0/0:41,0:41:99:0,120,1913	0/0:24,0:22:66.22:0,66,1051	0/0:22,0:21:63.21:0,63,1006	0/0:19,0:18:54.18:0,54,863	0/0:25,0:25:75.24:0,75,1174	0/0:24,0:24:72.25:0,72,1149	0/0:17,0:17:51.16:0,51,792	0/0:33,0:33:93.30:0,93,1460	0/0:33,0:32:96.33:0,96,1534	0/0:26,0:26:78.27:0,78,1247	0/0:20,0:20:60.20:0,60,959	0/0:20,0:20:57.19:0,57,908	0/0:21,0:21:63.21:0,63,1004	0/0:40,0:40:99:0,120,1869	0/0:21,0:21:63.20:0,63,983	0/0:26,0:26:78.27:0,78,1241	0/0:14,0:14:42.13:0,42,647	0/0:24,0:23:72.25:0,72,1151	0/0:35,1:36:66.39:0,66,1615	0/0:31,0:31:93.30:0,93,1455	0/0:21,0:21:63.21:0,63,1007
chr10	84861250	.	ATT	A	7921	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=10.487;DP=675;FS=0.998;HRun=12;HaplotypeScore=86.4807;InbreedingCoeff=0.9788;MQ=75.51;MQ0=1;MQRankSum=0.081;QD=22.96;ReadPosRankSum=2.952;VQSLOD=4.8097;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:34:81.15:824,81,0	1/1:1,7:9:11.89:175,12,0	0/0:14,0:15:20.87:0,21,191	0/0:15,0:16:5.40:0,5,116	0/0:29,0:30:74.71:0,75,1035	0/0:30,0:30:81.26:0,81,1188	1/1:2,16:19:29.79:357,30,0	1/1:8,27:35:74.88:815,75,0	0/0:20,0:22:51.16:0,51,724	1/1:5,26:31:72.06:732,72,0	1/1:3,23:26:63.11:641,63,0	0/0:22,0:24:56.12:0,56,753	0/0:19,0:19:54.18:0,54,781	0/0:29,0:31:80.24:0,80,1134	0/0:28,0:30:83.25:0,83,1161	1/1:2,24:28:65.61:705,66,0	1/1:3,20:23:54.09:549,54,0	0/0:15,0:16:45.08:0,45,591	1/1:9,17:26:53.50:503,53,0	1/1:4,27:32:68.93:754,69,0	1/1:4,16:20:48.09:488,48,0	1/1:2,24:28:59.55:573,60,0	0/0:19,0:22:56.12:0,56,720	0/0:19,0:22:50.63:0,51,662	1/1:2,11:14:26.79:256,27,0	0/0:28,1:31:47.20:0,47,994	1/1:0,19:19:54.12:549,54,0	0/0:20,0:21:36.08:0,36,479
chr10	84861639	.	T	TTCTC	6376.79	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.151;DP=812;FS=0.431;HRun=0;HaplotypeScore=126.9722;InbreedingCoeff=0.9986;MQ=86.20;MQ0=0;MQRankSum=-6.353;QD=65.74;ReadPosRankSum=-0.538;VQSLOD=6.3780;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,32:39:84.29:2296,84,0	0/0:8,0:8:21.07:0,21,407	0/0:30,0:30:81.28:0,81,1558	0/0:24,0:24:66.16:0,66,1143	0/0:31,0:31:93.31:0,93,1756	0/0:16,0:16:48.14:0,48,852	1/1:6,23:31:75.21:1976,75,0	0/0:35,0:35:93.30:0,93,1726	0/0:23,0:23:69.23:0,69,1297	0/0:27,0:27:78.24:0,78,1437	0/0:24,0:24:69.24:0,69,1328	0/0:41,0:41:99:0,123,2375	0/0:28,0:28:84.27:0,84,1582	0/0:24,0:24:72.23:0,72,1354	0/0:37,0:37:99:0,111,2152	0/0:23,0:23:66.21:0,66,1246	0/0:38,0:38:99:0,108,2050	0/0:33,0:33:99:0,99,1888	0/0:37,0:37:99:0,105,1991	0/0:21,0:21:63.22:0,63,1221	0/0:48,0:48:99:0,144,2756	0/0:30,0:30:87.30:0,87,1686	0/0:24,0:24:69.24:0,69,1338	0/0:25,0:25:75.26:0,75,1440	1/1:3,24:27:78.27:2105,78,0	0/0:43,0:43:99:0,126,2425	0/0:23,0:23:63.22:0,63,1221	0/0:22,0:22:66.23:0,66,1279
chr10	84861790	.	GC	G	2703.18	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=13.723;DP=725;FS=1.479;HRun=1;HaplotypeScore=89.0944;InbreedingCoeff=0.9917;MQ=92.96;MQ0=0;MQRankSum=-8.254;QD=34.66;ReadPosRankSum=0.361;VQSLOD=3.6024;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,50:50:99:1785,138,0	0/0:11,0:11:33.11:0,33,527	0/0:33,0:33:97.17:0,97,1444	0/0:33,0:33:89.14:0,89,1307	0/0:37,0:37:99:0,105,1654	0/0:19,0:19:57.19:0,57,911	1/1:0,28:28:81.26:1040,81,0	0/0:32,0:32:93.29:0,93,1425	0/0:27,0:27:81.28:0,81,1292	0/0:24,0:24:72.25:0,72,1151	0/0:25,0:25:75.26:0,75,1198	0/0:33,0:33:99:0,99,1537	0/0:13,0:13:39.12:0,39,596	0/0:25,0:25:75.24:0,75,1167	0/0:30,0:30:90.31:0,90,1435	0/0:16,0:16:48.15:0,48,745	0/0:30,0:30:90.31:0,90,1439	0/0:16,0:16:48.15:0,48,743	0/0:16,0:16:48.16:0,48,761	0/0:19,0:19:54.17:0,54,840	0/0:50,0:50:99:0,150,2372	0/0:26,0:26:78.25:0,78,1222	0/0:24,0:24:72.23:0,72,1122	0/0:32,0:32:96.31:0,96,1511	0/0:18,0:18:54.17:0,54,841	0/0:28,0:28:84.28:0,84,1317	0/0:25,0:25:75.26:0,75,1193	0/0:5,0:5:15.05:0,15,240
chr10	84862074	.	CCT	C	1409.72	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.229;DP=584;FS=14.196;HRun=0;HaplotypeScore=77.0141;InbreedingCoeff=0.9821;MQ=69.21;MQ0=0;MQRankSum=-4.198;QD=25.17;ReadPosRankSum=1.031;VQSLOD=3.4719;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,29:32:65.68:923,66,0	0/0:12,0:12:33.11:0,33,587	0/0:13,0:12:32.84:0,33,512	0/0:15,0:11:24.07:0,24,377	0/0:22,0:22:63.20:0,63,1088	0/0:20,0:20:57.18:0,57,996	1/1:3,21:24:45.11:608,45,0	0/0:30,0:30:84.27:0,84,1426	0/0:13,0:13:39.13:0,39,688	0/0:18,0:18:48.16:0,48,839	0/0:23,0:23:69.22:0,69,1197	0/0:21,0:21:60.20:0,60,1064	0/0:11,0:11:33.11:0,33,592	0/0:15,0:15:42.14:0,42,751	0/0:15,0:15:36.12:0,36,643	0/0:11,0:11:30.10:0,30,540	0/0:44,0:44:99:0,123,2163	0/0:28,0:28:78.27:0,78,1404	0/0:25,0:25:63.21:0,63,1103	0/0:25,0:25:72.24:0,72,1259	0/0:41,0:41:99:0,114,2053	0/0:5,0:5:15.05:0,15,270	0/0:20,0:20:57.19:0,57,999	0/0:27,0:27:81.28:0,81,1449	0/0:22,0:22:66.23:0,66,1169	0/0:23,0:23:69.24:0,69,1211	0/0:24,0:23:72.23:0,72,1246	0/0:5,0:5:15.05:0,15,254
chr10	84862578	.	A	AC	1249.56	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.770;DP=751;FS=0.000;HRun=3;HaplotypeScore=75.1376;InbreedingCoeff=0.9700;MQ=90.96;MQ0=0;MQRankSum=-2.097;QD=34.71;ReadPosRankSum=-0.870;VQSLOD=3.7014;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1464	0/0:5,0:5:12.04:0,12,144	0/0:28,0:28:77.59:0,78,882	0/0:31,0:31:67.58:0,68,1003	0/0:21,0:21:63.19:0,63,756	0/0:29,0:29:84.26:0,84,1008	1/1:1,35:36:96.32:1344,96,0	0/0:28,0:28:81.25:0,81,970	0/0:38,0:38:99:0,114,1355	0/0:23,0:23:63.19:0,63,756	0/0:21,0:21:63.19:0,63,755	0/0:23,0:23:66.20:0,66,791	0/0:27,0:27:78.24:0,78,936	0/0:24,0:24:66.19:0,66,780	0/0:20,0:20:60.18:0,60,720	0/0:28,0:28:81.25:0,81,972	0/0:36,0:36:96.29:0,96,1152	0/0:30,0:30:84.17:0,84,975	0/0:16,0:16:42.13:0,42,504	0/0:24,0:24:69.21:0,69,828	0/0:61,0:61:99:0,171,2002	0/0:21,0:21:63.19:0,63,756	0/0:16,0:16:45.14:0,45,540	0/0:41,0:41:99:0,120,1426	0/0:25,0:25:75.22:0,75,887	0/0:32,0:32:96.29:0,96,1152	0/0:12,0:12:33.08:0,33,384	0/0:14,0:14:42.13:0,42,504
chr10	84864890	.	CTG	C	852.98	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.241;DP=995;FS=3.829;HRun=0;HaplotypeScore=144.5082;InbreedingCoeff=0.9987;MQ=63.55;MQ0=1;MQRankSum=0.055;QD=25.09;ReadPosRankSum=-0.863;VQSLOD=4.1099;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:69.18:0,69,1175	0/0:25,0:25:75.24:0,75,1296	0/0:49,0:41:99:0,111,1912	0/0:54,0:39:88.61:0,89,1315	0/0:27,0:27:78.25:0,78,1354	0/0:31,0:31:87.28:0,87,1506	1/1:1,33:34:69.23:948,69,0	0/0:56,0:56:99:0,157,2766	0/0:43,0:42:99:0,117,2069	0/0:52,0:52:99:0,138,2449	0/0:27,0:27:75.26:0,75,1327	0/0:37,0:37:99:0,108,1911	0/0:43,0:43:99:0,126,2192	0/0:30,0:30:84.25:0,84,1432	0/0:32,0:32:87.30:0,87,1539	0/0:34,0:34:99:0,99,1750	0/0:23,0:25:60.02:0,60,1065	0/0:37,0:37:94.96:0,95,1607	0/0:12,0:12:26.12:0,26,432	0/0:26,0:26:72.25:0,72,1265	0/0:44,0:45:99:0,123,2141	0/0:26,0:26:72.25:0,72,1267	0/0:32,0:32:87.30:0,87,1537	0/0:33,0:33:71.93:0,72,1246	0/0:37,0:37:99:0,99,1724	0/0:52,0:52:99:0,138,2441	0/0:42,0:42:99:0,117,2070	0/0:25,0:25:69.24:0,69,1224
chr10	84865011	.	ATG	A	12636.41	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=16.569;DP=895;FS=2.166;HRun=0;HaplotypeScore=157.8770;InbreedingCoeff=0.9999;MQ=59.70;MQ0=3;MQRankSum=-1.845;QD=31.12;ReadPosRankSum=-0.444;VQSLOD=6.2146;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,20:26:54.18:717,54,0	1/1:2,13:15:30.10:399,30,0	0/0:38,0:35:68.83:0,69,1260	0/0:34,0:31:58.53:0,59,1094	0/0:33,0:33:93.30:0,93,1557	0/0:26,0:26:78.27:0,78,1331	1/1:5,22:27:63.21:838,63,0	1/1:8,39:46:99:1542,117,0	0/0:46,0:46:99:0,135,2313	1/1:11,30:41:99:1357,102,0	1/1:1,19:19:42.12:559,42,0	0/0:34,0:34:96.32:0,96,1636	0/0:42,0:42:99:0,111,1895	0/0:33,0:33:90.31:0,90,1548	0/0:39,0:39:99:0,111,1913	1/1:4,28:32:81.27:1078,81,0	1/1:5,19:24:45.16:671,45,0	0/0:28,0:28:61.87:0,62,1088	1/1:4,16:19:48.15:625,48,0	1/1:5,17:22:54.16:703,54,0	1/1:10,40:49:99:1437,108,0	1/1:9,26:35:75.25:997,75,0	0/0:40,0:40:99:0,111,1871	0/0:35,0:36:92.95:0,93,1565	1/1:1,26:27:72.24:958,72,0	0/0:40,2:42:34.47:0,34,1788	1/1:3,17:20:57.19:755,57,0	0/0:17,0:17:48.16:0,48,831
chr10	84865064	.	ATG	A	12213.45	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=16.967;DP=960;FS=3.448;HRun=0;HaplotypeScore=173.7222;InbreedingCoeff=0.9999;MQ=58.13;MQ0=9;MQRankSum=-0.285;QD=26.61;ReadPosRankSum=0.165;VQSLOD=5.6915;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,20:29:48.41:639,48,0	1/1:3,13:16:33.09:424,33,0	0/0:49,0:30:57.12:0,57,858	0/0:52,0:31:70.36:0,70,1088	0/0:23,0:23:63.22:0,63,1054	0/0:21,0:21:54.14:0,54,839	1/1:10,22:32:66.03:845,66,0	1/1:20,22:39:87.26:1102,87,0	0/0:48,0:47:99:0,138,2249	1/1:10,45:54:99:1769,141,0	1/1:4,20:24:39.13:519,39,0	0/0:40,0:40:99:0,114,1918	0/0:40,0:40:99:0,117,1958	0/0:37,0:37:96.28:0,96,1579	0/0:33,0:33:90.29:0,90,1477	1/1:7,21:28:63.21:838,63,0	1/1:5,17:22:34.85:445,35,0	0/0:20,0:20:49.51:0,50,782	1/1:13,7:17:39.11:487,39,0	1/1:3,20:23:54.16:702,54,0	1/1:6,58:63:98.84:1300,99,0	1/1:6,29:35:81.24:1047,81,0	0/0:37,0:36:99:0,102,1733	0/0:39,0:40:95.72:0,96,1595	1/1:9,21:30:72.11:860,72,0	0/0:45,0:45:99:0,104,1969	1/1:2,37:39:93.31:1237,93,0	0/0:16,0:16:33.58:0,34,551
chr10	84865319	.	GTGTACAC	G	6329.96	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.824;DP=698;FS=4.723;HRun=0;HaplotypeScore=162.3870;InbreedingCoeff=0.9988;MQ=68.03;MQ0=0;MQRankSum=-14.045;QD=60.29;ReadPosRankSum=0.940;VQSLOD=4.9947;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,129,5121	1/1:0,11:11:27.56:712,28,0	0/0:19,0:19:57.17:0,57,1950	0/0:24,0:24:66.22:0,66,2407	0/0:19,0:19:57.20:0,57,2250	0/0:22,0:22:63.22:0,63,2456	0/0:32,0:32:93.31:0,93,3573	0/0:19,0:19:57.19:0,57,2157	0/0:24,0:24:69.24:0,69,2726	1/1:2,31:33:87.30:2259,87,0	1/1:1,10:11:21.07:553,21,0	0/0:29,0:29:84.29:0,84,3365	0/0:30,0:30:90.31:0,90,3501	0/0:19,0:19:57.18:0,57,2175	0/0:37,0:37:99:0,108,4104	1/1:3,19:22:42.14:1107,42,0	1/1:1,26:27:66.23:1699,66,0	0/0:14,0:14:42.14:0,42,1666	0/0:16,0:16:45.15:0,45,1750	0/0:24,0:24:69.22:0,69,2621	0/0:52,0:52:99:0,151,5969	0/0:33,0:33:99:0,99,3777	0/0:24,0:24:72.25:0,72,2900	0/0:27,0:27:78.27:0,78,3017	0/0:22,0:22:66.23:0,66,2565	0/0:30,0:30:84.28:0,84,3211	0/0:16,0:16:39.61:0,40,1523	0/0:15,0:15:45.15:0,45,1816
chr10	84866495	.	AAG	A	3668.46	PASS	AB=0.701;AC=6;AF=0.107;AN=56;BaseQRankSum=12.790;DP=687;FS=6.952;HRun=0;HaplotypeScore=89.9391;InbreedingCoeff=-0.1207;MQ=81.90;MQ0=0;MQRankSum=-7.815;QD=15.41;ReadPosRankSum=-0.782;VQSLOD=2.4967;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,144,2436	0/0:12,0:12:36.11:0,36,602	0/0:17,0:18:46.94:0,47,746	0/0:22,0:22:51.08:0,51,756	0/0:23,0:23:63.20:0,63,1088	0/0:12,0:12:36.09:0,36,564	0/0:20,0:20:60.16:0,60,986	0/1:22,25:47:99:879,0,793	0/0:19,0:19:54.18:0,54,942	0/0:23,0:23:63.21:0,63,1084	0/0:13,0:13:39.11:0,39,619	0/0:22,0:22:60.19:0,60,1031	0/0:28,0:28:75.26:0,75,1310	0/0:17,0:17:48.14:0,48,820	0/0:26,0:26:72.22:0,72,1220	0/0:16,0:17:48.11:0,48,766	0/0:26,0:26:72.23:0,72,1247	0/0:16,0:16:42.09:0,42,683	0/1:19,20:39:99:715,0,717	0/1:19,4:23:95.34:95,0,942	0/1:18,27:45:99:904,0,651	0/1:19,16:35:99:555,0,819	0/0:17,0:17:45.14:0,45,763	0/0:30,0:30:90.29:0,90,1565	0/0:15,0:15:42.13:0,42,708	0/0:16,0:16:48.16:0,48,845	0/1:31,18:49:99:519,0,1402	0/0:5,0:5:15.04:0,15,236
chr10	84866758	.	GTT	G	1966.31	PASS	AB=0.811;AC=16;AF=0.286;AN=56;BaseQRankSum=8.578;DP=568;FS=0.000;HRun=14;HaplotypeScore=83.3602;InbreedingCoeff=0.7827;MQ=67.56;MQ0=2;MQRankSum=-0.520;QD=10.14;ReadPosRankSum=4.801;VQSLOD=2.1813;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:37:68.54:296,69,0	1/1:3,5:9:5.82:102,6,0	0/1:20,1:13:14.84:15,0,119	0/0:10,0:5:13.56:0,14,139	0/0:29,0:30:74.69:0,75,952	0/0:20,0:23:62.17:0,62,777	0/1:9,1:18:21.14:21,0,161	0/0:30,0:32:67.74:0,68,785	0/0:20,0:21:51.14:0,51,667	1/1:7,13:22:10.59:305,11,0	1/1:3,9:12:27:249,27,0	0/0:14,0:18:39.11:0,39,516	0/0:11,0:11:24.04:0,24,289	0/0:15,0:17:42.11:0,42,506	0/0:21,0:21:51.06:0,51,655	1/1:7,19:27:41.57:419,42,0	1/1:10,20:31:25.64:445,26,0	0/0:27,0:34:84.17:0,84,956	0/0:19,0:21:39.09:0,39,507	0/0:21,0:22:50.60:0,51,599	0/0:5,0:7:14.02:0,14,143	0/0:15,0:17:38.54:0,39,460	0/0:15,0:18:32.03:0,32,342	0/0:13,0:14:32.15:0,32,349	1/1:3,11:16:29.60:309,30,0	0/0:23,0:28:47:0,47,620	0/0:14,0:15:8.17:0,8,352	0/0:9,0:15:43.48:0,43,445
chr10	84867064	.	CT	C	1597.35	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=6.216;DP=299;FS=0.000;HRun=5;HaplotypeScore=40.9998;InbreedingCoeff=0.8718;MQ=69.81;MQ0=1;MQRankSum=-1.823;QD=25.35;ReadPosRankSum=-2.024;VQSLOD=1.5744;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:44.98:0,45,439	0/0:7,0:7:18.04:0,18,214	0/0:10,0:10:18.05:0,18,229	./.	0/0:13,0:13:38.68:0,39,464	0/0:15,0:15:42.13:0,42,556	0/0:8,0:8:24.08:0,24,324	1/1:2,25:26:75.21:850,75,0	0/0:3,0:3:9.02:0,9,106	0/0:14,0:14:33.09:0,33,429	0/0:7,0:7:18.06:0,18,244	0/0:8,0:8:24.06:0,24,307	0/0:12,0:12:33.11:0,33,449	0/0:4,0:4:4.26:0,4,44	0/0:5,0:5:12.04:0,12,163	0/0:3,0:3:7.57:0,8,86	0/0:20,0:20:38.27:0,38,299	0/0:28,0:28:84.20:0,84,1102	1/1:15,0:15:44.92:472,45,0	1/1:8,0:8:20.95:219,21,0	./.	1/1:1,7:8:18.05:202,18,0	0/0:9,0:9:24.04:0,24,303	0/0:7,0:7:15.01:0,15,182	0/0:6,0:5:16.60:0,17,207	0/0:12,0:12:31.63:0,32,382	1/1:5,0:5:2.90:16,3,0	0/0:19,0:19:57.17:0,57,758
chr10	84867065	.	TTTTTATTTA	T	1984.47	PASS	AB=1.000;AC=10;AF=0.192;AN=52;BaseQRankSum=5.964;DP=299;FS=0.000;HRun=0;HaplotypeScore=87.3957;InbreedingCoeff=0.6399;MQ=68.21;MQ0=1;MQRankSum=-1.851;QD=28.76;ReadPosRankSum=-1.560;VQSLOD=2.6204;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:45.15:0,45,1478	0/0:7,0:7:18.05:0,18,257	0/0:9,0:9:18.05:0,18,229	./.	0/0:13,0:13:39.13:0,39,854	0/0:15,0:15:42.13:0,42,1569	0/0:8,0:8:24.08:0,24,324	1/1:27,0:26:72.29:946,72,0	0/0:4,0:4:12.03:0,12,335	0/0:14,0:14:33.11:0,33,472	0/0:7,0:7:18.06:0,18,272	0/0:8,0:8:24.08:0,24,459	0/0:11,0:11:33.11:0,33,969	0/0:4,0:4:2.97:0,3,41	0/0:5,0:5:12.04:0,12,373	0/0:3,0:3:9.03:0,9,128	0/0:20,0:20:57.19:0,57,931	0/0:28,0:28:84.24:0,84,2586	1/1:1,15:16:45.10:643,45,0	1/1:0,8:8:21.06:294,21,0	./.	0/1:7,0:7:42.66:150,0,43	0/0:8,0:8:24.08:0,24,385	0/0:7,0:7:15.05:0,15,304	0/1:6,0:5:16.12:16,0,185	0/0:11,0:11:33.09:0,33,739	1/1:0,5:5:3.01:91,3,0	0/0:22,0:22:66.20:0,66,1949
chr10	84867066	.	TTTTA	T	775.83	PASS	AB=0.917;AC=19;AF=0.432;AN=44;BaseQRankSum=3.541;DP=296;FS=3.236;HRun=0;HaplotypeScore=60.2536;InbreedingCoeff=0.5123;MQ=66.77;MQ0=1;MQRankSum=-0.427;QD=6.69;ReadPosRankSum=-0.324;VQSLOD=1.8179;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:18:30.10:0,30,523	1/1:7,0:7:3:25,3,0	./.	./.	0/0:10,0:13:12.03:0,12,189	0/0:15,0:15:30.10:0,30,640	./.	1/1:27,0:26:5.96:44,6,0	0/0:4,0:4:6.02:0,6,137	1/1:13,0:13:3:27,3,0	./.	0/0:7,0:8:3.01:0,3,52	0/0:11,0:11:15.05:0,15,326	./.	0/0:5,0:5:6.02:0,6,141	1/1:2,1:3:3.01:47,3,0	1/1:6,14:20:39.13:608,39,0	0/0:28,0:28:42.14:0,42,990	1/1:16,0:16:6.48:56,6,0	1/1:8,0:8:3:28,3,0	./.	0/0:7,0:7:3.01:0,3,34	0/0:8,0:8:3.01:0,3,39	0/0:6,0:6:3.01:0,3,71	1/1:4,0:6:3:28,3,0	0/1:10,1:11:34.70:35,0,200	1/1:5,0:5:3:28,3,0	0/0:22,0:22:18.54:0,19,459
chr10	84867945	.	G	GAC	15129.85	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-7.797;DP=870;FS=2.284;HRun=0;HaplotypeScore=159.9010;InbreedingCoeff=0.9994;MQ=62.90;MQ0=6;MQRankSum=0.212;QD=38.70;ReadPosRankSum=-0.686;VQSLOD=5.8428;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,30:44:71.95:1230,72,0	1/1:0,14:14:33.11:603,33,0	0/0:50,0:33:53.82:0,54,820	0/0:58,0:40:30.85:0,31,771	0/0:29,0:29:84.25:0,84,1163	0/0:27,0:27:78.23:0,78,1077	1/1:6,18:24:43.61:1031,44,0	1/1:7,41:46:99:1923,114,0	0/0:37,0:37:99:0,105,1481	1/1:2,36:37:99:1935,108,0	1/1:2,21:24:33.10:583,33,0	0/0:25,0:25:72.24:0,72,1029	0/0:30,0:30:84.23:0,84,1158	0/0:25,0:25:69.23:0,69,984	0/0:32,0:32:93.24:0,93,1236	1/1:1,43:44:99:1979,108,0	1/1:2,37:40:70.79:1666,71,0	0/0:42,0:43:91.86:0,92,1575	1/1:5,21:25:40.17:938,40,0	1/1:1,14:15:33.11:553,33,0	1/1:9,11:19:33.05:574,33,0	1/1:1,12:13:36.12:650,36,0	0/0:21,0:21:63.20:0,63,882	0/0:59,0:61:99:0,156,2137	1/1:5,10:15:26.11:399,26,0	0/0:27,0:27:26.87:0,27,1006	1/1:4,22:26:30.32:1066,30,0	0/0:12,0:12:36.12:0,36,515
chr10	84867961	.	GAGAGACAGACAGAAAC	G	6816.70	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=8.370;DP=806;FS=9.956;HRun=0;HaplotypeScore=384.9760;InbreedingCoeff=0.9917;MQ=65.74;MQ0=2;MQRankSum=-9.661;QD=35.14;ReadPosRankSum=-6.704;VQSLOD=1.7346;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:33,5:38:41:1276,41,0	0/0:10,0:10:15.05:0,15,866	0/0:51,0:36:57.93:0,58,1079	0/0:57,0:42:31.66:0,32,709	0/0:31,0:31:78.20:0,78,4464	0/0:31,0:31:63.20:0,63,2778	1/1:22,0:22:27.07:554,27,0	1/1:26,0:26:40.07:406,40,0	0/0:33,0:33:81.25:0,81,3862	0/0:39,0:39:87.26:0,87,4490	0/0:17,0:17:33.11:0,33,1100	0/0:30,0:30:75.23:0,75,3701	0/0:25,0:25:48.14:0,48,2583	0/0:22,0:22:48.14:0,48,2644	0/0:21,0:21:45.15:0,45,2484	0/0:38,0:38:84.26:0,84,4070	0/0:36,0:36:84.22:0,84,3677	0/0:44,0:44:99:0,109,5463	1/1:22,2:24:45.10:1060,45,0	1/1:10,4:14:26.99:603,27,0	1/1:19,0:19:28.23:591,28,0	1/1:10,1:11:12.04:288,12,0	0/0:28,0:28:78.27:0,78,4195	0/0:65,0:65:64.14:0,64,6536	1/1:9,3:12:24.08:662,24,0	0/0:22,0:22:54.18:0,54,2895	1/1:23,5:28:51.15:1378,51,0	0/0:11,0:11:30.06:0,30,1474
chr10	84867975	.	A	AGC	3444.01	PASS	AB=0.770;AC=10;AF=0.179;AN=56;BaseQRankSum=12.892;DP=818;FS=55.451;HRun=0;HaplotypeScore=195.5951;InbreedingCoeff=0.0470;MQ=67.21;MQ0=5;MQRankSum=-10.151;QD=18.42;ReadPosRankSum=-3.572;VQSLOD=1.5636;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,14:37:39.11:634,0,39	0/0:12,0:12:33.02:0,33,458	0/0:50,0:34:73.74:0,74,1102	0/0:57,0:38:43.75:0,44,667	0/0:29,0:29:87.28:0,87,1394	0/0:30,0:30:81.17:0,81,1193	0/1:12,9:21:99:370,0,103	0/1:19,3:22:99:100,0,161	0/0:31,0:31:93.23:0,93,1431	0/0:40,0:40:99:0,117,1782	0/0:23,0:23:54.17:0,54,845	0/0:36,0:36:99:0,105,1686	0/0:26,0:26:75.22:0,75,1149	0/0:21,0:21:63.14:0,63,946	0/0:19,0:19:54.17:0,54,858	0/0:36,0:36:99:0,99,1543	0/0:36,0:35:99:0,102,1574	0/0:42,0:42:99:0,124,1936	0/1:20,4:23:73.71:284,0,74	0/1:10,5:15:13.04:382,0,13	1/1:9,7:16:19.87:309,20,0	0/1:7,3:10:15.91:241,0,16	0/0:31,0:31:93.30:0,93,1491	0/0:70,1:72:99:0,195,2915	0/1:10,5:15:13.86:443,0,14	0/0:25,0:25:69.24:0,69,1125	0/1:17,10:27:22.81:681,0,23	0/0:13,0:13:39.10:0,39,599
chr10	84867977	.	C	CAG	4208.70	PASS	AB=0.886;AC=16;AF=0.286;AN=56;BaseQRankSum=13.653;DP=835;FS=22.090;HRun=0;HaplotypeScore=197.0787;InbreedingCoeff=0.8155;MQ=64.26;MQ0=6;MQRankSum=-11.486;QD=19.85;ReadPosRankSum=-6.092;VQSLOD=1.4739;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:24,14:39:65.59:782,66,0	0/0:11,0:11:27.07:0,27,352	0/0:47,0:30:53.38:0,53,679	0/0:57,0:37:40.43:0,40,506	0/0:29,0:29:87.28:0,87,1183	0/0:26,0:26:72.15:0,72,910	1/1:18,9:28:12.45:474,12,0	0/1:24,3:29:16.02:435,0,16	0/0:31,0:31:81.25:0,81,1089	0/0:38,0:38:99:0,102,1400	0/0:26,0:26:57.16:0,57,742	0/0:36,0:36:99:0,102,1381	0/0:29,0:29:66.20:0,66,890	0/0:21,0:21:57.19:0,57,776	0/0:21,0:21:57.16:0,57,748	0/0:36,0:36:87.26:0,87,1178	0/0:34,0:33:87.29:0,87,1193	0/0:42,0:42:98.01:0,98,1447	0/1:22,4:25:12.34:439,0,12	1/1:12,5:17:33.08:388,33,0	1/1:10,7:19:26.71:347,27,0	1/1:5,3:9:18.52:231,19,0	0/0:30,0:30:90.30:0,90,1231	0/0:70,0:70:99:0,162,2122	1/1:9,5:14:9.19:407,9,0	0/0:25,0:25:72.22:0,72,959	1/1:21,9:31:42.35:706,42,0	0/0:13,0:13:33.11:0,33,449
chr10	84868147	.	AAG	A	572.21	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.298;DP=818;FS=7.470;HRun=0;HaplotypeScore=114.8387;InbreedingCoeff=0.9801;MQ=57.08;MQ0=12;MQRankSum=-4.539;QD=18.46;ReadPosRankSum=-3.651;VQSLOD=2.7634;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:16,15:29:60.98:667,61,0	0/0:17,0:17:48.16:0,48,811	0/0:74,0:24:35.54:0,36,488	0/0:110,0:40:36.88:0,37,624	0/0:22,0:22:63.20:0,63,1052	0/0:26,0:26:78.18:0,78,1217	0/0:25,0:25:66.22:0,66,1106	0/0:32,0:31:72.20:0,72,1162	0/0:26,0:26:72.19:0,72,1132	0/0:38,0:38:99:0,99,1691	0/0:21,0:21:63.21:0,63,1060	0/0:28,0:28:75.21:0,75,1263	0/0:14,0:14:42.14:0,42,727	0/0:8,0:8:21.07:0,21,351	0/0:20,0:20:48.14:0,48,750	0/0:27,0:27:71.96:0,72,1241	0/0:38,0:37:96.29:0,96,1558	0/0:33,0:31:78.22:0,78,1279	0/0:23,0:22:66.20:0,66,1097	0/0:19,0:18:39.13:0,39,666	0/0:31,0:30:77.44:0,77,1171	0/0:36,0:36:99:0,105,1735	0/0:22,0:22:56.73:0,57,932	0/0:29,0:29:66.13:0,66,1067	0/0:13,0:13:36.12:0,36,608	0/0:28,0:28:81.27:0,81,1380	0/0:19,0:19:51.09:0,51,797	0/0:6,0:6:15.03:0,15,234
chr10	84868241	.	AAGAG	A	7116.20	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=12.320;DP=580;FS=1.708;HRun=0;HaplotypeScore=154.4774;InbreedingCoeff=0.9888;MQ=48.93;MQ0=13;MQRankSum=-9.644;QD=27.16;ReadPosRankSum=-1.260;VQSLOD=4.7613;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,10:20:35.77:378,36,0	1/1:8,6:14:22.48:235,22,0	0/0:46,0:14:24.01:0,24,418	0/0:71,0:13:17.85:0,18,205	0/0:19,0:19:54.15:0,54,1188	0/0:27,0:27:56.54:0,57,1492	1/1:5,18:23:42.10:696,42,0	1/1:13,15:27:66.12:1000,66,0	0/0:16,0:16:33.11:0,33,833	1/1:13,7:20:49.75:712,50,0	1/1:18,3:21:38.49:367,38,0	0/0:9,0:9:24.08:0,24,538	0/0:9,0:9:21.07:0,21,505	0/0:13,0:13:36.12:0,36,898	0/0:15,0:15:42.14:0,42,999	1/1:12,4:16:44.85:490,45,0	1/1:15,4:18:36.51:356,37,0	0/0:20,0:19:45.09:0,45,940	1/1:11,5:15:36.09:545,36,0	1/1:15,7:21:38.49:381,38,0	1/1:3,2:5:8.78:89,9,0	1/1:12,8:20:36.03:489,36,0	0/0:16,0:16:39.12:0,39,951	0/0:17,0:17:33.11:0,33,790	1/1:5,11:16:36.04:554,36,0	0/0:17,0:17:42.14:0,42,995	1/1:16,5:21:57.09:824,57,0	0/0:22,0:22:60.19:0,60,1449
chr10	84868248	.	A	AG	3623.47	PASS	AB=0.895;AC=22;AF=0.393;AN=56;BaseQRankSum=10.907;DP=586;FS=4.064;HRun=1;HaplotypeScore=162.9390;InbreedingCoeff=0.5464;MQ=53.72;MQ0=15;MQRankSum=-10.113;QD=13.27;ReadPosRankSum=0.383;VQSLOD=2.8940;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,1:21:64.96:65,0,86	1/1:7,5:12:17.49:227,17,0	0/0:52,0:16:27.06:0,27,321	0/0:75,0:14:23.41:0,23,219	0/0:20,0:20:57.18:0,57,735	0/0:26,0:26:68.62:0,69,852	0/1:21,0:21:1.54:2,0,45	0/1:30,1:30:73.22:249,0,73	0/0:12,0:12:33.11:0,33,429	0/1:14,10:24:16.57:416,0,17	1/1:8,14:21:40.45:573,40,0	0/0:10,0:10:27.09:0,27,350	0/0:8,0:8:21.07:0,21,273	0/0:13,0:13:36.12:0,36,467	0/0:14,0:14:42.14:0,42,543	1/1:9,9:18:30.68:468,31,0	0/1:14,5:19:7.02:215,0,7	0/0:18,0:17:45.13:0,45,557	1/1:13,5:16:13.72:267,14,0	1/1:13,10:22:41.48:375,41,0	1/1:6,0:6:3.10:29,3,0	1/1:12,6:18:6.80:197,7,0	0/0:17,0:17:42.12:0,42,530	0/0:12,0:12:33.11:0,33,428	0/1:17,1:18:33.76:146,0,34	0/0:14,0:14:42.14:0,42,545	1/1:13,9:21:30.72:396,31,0	0/0:21,0:21:60.19:0,60,779
chr10	84868249	.	GA	G	2265.38	PASS	AB=0.978;AC=24;AF=0.429;AN=56;BaseQRankSum=11.816;DP=580;FS=5.766;HRun=1;HaplotypeScore=159.8429;InbreedingCoeff=0.6756;MQ=53.87;MQ0=14;MQRankSum=-9.243;QD=8.45;ReadPosRankSum=2.758;VQSLOD=1.3461;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,1:19:86.61:87,0,94	1/1:12,0:12:22.16:128,22,0	0/0:51,0:16:29.47:0,29,379	0/0:73,0:13:21.54:0,22,213	0/0:20,0:20:60.19:0,60,894	0/0:26,0:26:67:0,67,1036	1/1:21,0:21:9.47:94,9,0	0/1:31,0:30:64.37:234,0,64	0/0:12,0:12:36.12:0,36,562	0/1:23,1:24:27.51:171,0,28	1/1:21,1:21:36.69:234,37,0	0/0:10,0:10:30.09:0,30,447	0/0:8,0:8:21.07:0,21,336	0/0:13,0:13:39.13:0,39,612	0/0:14,0:14:42.14:0,42,657	1/1:18,0:18:42.14:254,42,0	0/1:19,0:19:5.07:80,0,5	0/0:18,0:17:48.11:0,48,702	1/1:17,0:15:16.17:188,16,0	1/1:23,0:22:36.14:271,36,0	1/1:6,0:6:8.22:38,8,0	1/1:18,0:18:27.91:176,28,0	0/0:16,0:16:42.13:0,42,638	0/0:13,0:13:36.08:0,36,547	1/1:15,1:16:1.99:146,2,0	0/0:15,0:15:42.14:0,42,672	1/1:22,0:21:57.35:374,57,0	0/0:21,0:21:60.20:0,60,959
chr10	84868252	.	AG	A	2314.26	PASS	AB=0.976;AC=22;AF=0.393;AN=56;BaseQRankSum=12.777;DP=582;FS=9.074;HRun=2;HaplotypeScore=164.4774;InbreedingCoeff=0.6580;MQ=57.32;MQ0=14;MQRankSum=-10.405;QD=8.77;ReadPosRankSum=1.964;VQSLOD=0.7481;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,2:19:0.07:0,0,140	1/1:11,1:12:16.52:144,17,0	0/0:55,0:20:44.79:0,45,560	0/0:74,0:14:15.72:0,16,201	0/0:18,0:18:51.16:0,51,734	0/0:25,0:25:64.44:0,64,932	0/1:21,0:21:19.95:30,0,20	0/1:29,0:28:90.16:105,0,90	0/0:13,0:13:36.10:0,36,508	1/1:18,7:25:49.15:497,49,0	1/1:18,4:22:36.05:295,36,0	0/0:10,0:10:30.10:0,30,440	0/0:8,0:8:21.07:0,21,309	0/0:13,0:13:39.13:0,39,574	0/0:14,0:14:42.09:0,42,579	1/1:16,2:18:30.19:249,30,0	1/1:17,1:18:2.32:142,2,0	0/0:18,0:16:39.07:0,39,545	1/1:15,4:18:3.93:189,4,0	1/1:12,11:21:25.37:240,25,0	0/0:6,0:6:1.85:0,2,4	1/1:12,6:18:19.41:196,19,0	0/0:15,0:15:39.13:0,39,575	0/0:14,0:14:39.07:0,39,527	0/1:17,0:17:53.31:82,0,53	0/0:14,0:14:42.14:0,42,620	1/1:14,9:22:44.47:346,44,0	0/0:21,0:21:60.18:0,60,873
chr10	84868253	.	G	GA	3072.52	PASS	AB=0.957;AC=17;AF=0.304;AN=56;BaseQRankSum=12.400;DP=591;FS=13.089;HRun=1;HaplotypeScore=170.4117;InbreedingCoeff=0.4803;MQ=56.94;MQ0=15;MQRankSum=-11.470;QD=13.42;ReadPosRankSum=2.659;VQSLOD=1.7469;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,1:21:15.79:0,16,217	1/1:8,4:12:10.36:234,10,0	0/0:55,0:20:45.50:0,46,553	0/0:73,1:14:26.40:0,26,225	0/0:18,0:18:51.17:0,51,703	0/0:24,0:24:64.75:0,65,879	0/0:22,0:22:20.42:0,20,149	0/1:29,0:28:68.24:68,0,155	0/0:13,0:13:36.10:0,36,481	1/1:16,10:26:1.05:664,1,0	1/1:10,14:23:36.77:562,37,0	0/0:10,0:10:30.10:0,30,416	0/0:8,0:8:21.07:0,21,291	0/0:13,0:13:39.13:0,39,538	0/0:14,0:14:42.08:0,42,546	1/1:11,9:20:8.68:429,9,0	0/1:13,5:18:17.23:286,0,17	0/0:16,0:14:39.11:0,39,518	0/1:21,0:20:14.73:201,0,15	1/1:22,0:21:33.05:279,33,0	0/0:5,1:6:1.68:0,2,15	0/1:18,0:18:15.09:198,0,15	0/0:15,0:15:39.13:0,39,540	0/0:14,0:14:39.07:0,39,496	0/1:16,0:16:17.32:17,0,113	0/0:14,0:14:42.14:0,42,584	1/1:23,0:22:8.65:315,9,0	0/0:23,0:23:60.18:0,60,819
chr10	84868274	.	G	GAGA	3792.22	PASS	AB=0.882;AC=20;AF=0.357;AN=56;BaseQRankSum=10.113;DP=593;FS=1.281;HRun=0;HaplotypeScore=194.1195;InbreedingCoeff=0.4779;MQ=61.23;MQ0=18;MQRankSum=-11.184;QD=11.85;ReadPosRankSum=4.094;VQSLOD=2.9701;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:14.77:0,15,203	1/1:5,0:5:15.03:188,15,0	0/0:67,0:23:42.09:0,42,423	0/1:94,0:22:10.50:10,0,400	0/0:12,0:12:33.09:0,33,476	0/0:22,0:22:51.40:0,51,965	0/1:17,0:22:4.91:5,0,86	0/1:20,7:28:31.22:602,0,31	0/0:10,0:10:21.01:0,21,300	0/1:27,0:28:15.15:598,0,15	1/1:24,0:23:10.71:252,11,0	0/0:17,0:17:42.02:0,42,689	0/0:12,0:12:30.03:0,30,476	0/0:8,0:8:24.06:0,24,357	0/0:17,0:17:38.74:0,39,463	1/1:14,0:14:7.39:252,7,0	1/1:13,0:14:7.39:190,7,0	0/0:16,0:14:42.11:0,42,666	1/1:18,5:23:5.97:642,6,0	0/1:18,2:18:2.06:333,0,2	1/1:11,0:11:4.40:20,4,0	1/1:9,2:14:9.98:259,10,0	0/0:13,0:13:33.09:0,33,518	0/0:14,0:14:31.35:0,31,538	0/0:17,0:17:2.17:0,2,31	0/0:14,0:14:36.12:0,36,606	0/1:16,3:18:17.70:440,0,18	0/0:16,0:16:45.14:0,45,779
chr10	84868281	.	G	GA	1860.02	PASS	AB=0.927;AC=24;AF=0.429;AN=56;BaseQRankSum=10.554;DP=637;FS=0.831;HRun=0;HaplotypeScore=178.2641;InbreedingCoeff=0.6747;MQ=61.31;MQ0=21;MQRankSum=-10.307;QD=6.76;ReadPosRankSum=-0.904;VQSLOD=3.2986;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,10:16:25.17:306,25,0	1/1:5,0:5:6.13:40,6,0	0/0:80,0:23:36.04:0,36,331	0/0:106,0:23:49.62:0,50,405	0/0:13,0:13:39.07:0,39,445	0/0:25,0:25:49.97:0,50,749	1/1:15,5:20:1.28:129,1,0	1/1:28,7:33:34.83:408,35,0	0/0:8,0:8:20.95:0,21,225	0/1:29,0:29:13.34:179,0,13	1/1:25,0:24:3.29:114,3,0	0/0:19,0:19:47.79:0,48,562	0/0:13,0:13:39.02:0,39,459	0/0:7,0:7:20.84:0,21,244	0/0:17,0:17:38.73:0,39,422	0/1:16,0:16:0.83:74,0,1	1/1:14,0:14:4.43:69,4,0	0/0:14,0:12:36.08:0,36,474	0/1:21,5:26:0.57:245,0,1	1/1:18,2:18:23.09:120,23,0	1/1:16,0:16:13.62:80,14,0	1/1:12,3:15:14.76:85,15,0	0/0:14,0:14:33.86:0,34,467	0/0:15,0:15:40.34:0,40,489	1/1:18,0:18:6.69:111,7,0	0/0:13,0:13:36.09:0,36,447	0/1:17,2:19:10.76:98,0,11	0/0:18,0:18:48.11:0,48,609
chr10	84868283	.	A	AGC	570.35	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=8.813;DP=656;FS=7.332;HRun=0;HaplotypeScore=195.7924;InbreedingCoeff=0.0683;MQ=60.55;MQ0=22;MQRankSum=-8.390;QD=2.42;ReadPosRankSum=1.631;VQSLOD=2.0686;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:15.05:15,0,49	1/1:7,0:7:6.42:20,6,0	0/0:80,0:21:20.25:0,20,361	0/0:108,0:24:22.57:0,23,520	0/0:14,0:14:39.13:0,39,581	0/0:23,0:23:61.53:0,62,875	0/1:20,0:20:69.16:83,0,69	0/1:34,0:32:24.26:24,0,59	0/0:9,0:9:21.02:0,21,267	0/0:32,0:32:35.54:0,36,331	0/1:25,0:24:13.76:14,0,52	0/0:19,0:19:54.59:0,55,733	0/0:15,0:15:39.12:0,39,565	0/0:7,0:7:21.07:0,21,316	0/0:17,0:17:42.13:0,42,595	0/1:16,0:16:11.67:12,0,25	0/1:15,0:15:9.35:9,0,38	0/0:14,0:12:36.12:0,36,542	0/1:24,0:24:1.98:2,0,137	0/1:20,0:19:1.38:1,0,80	0/0:18,0:18:10.10:0,10,60	0/1:16,0:16:10.99:11,0,68	0/0:14,0:14:42.07:0,42,597	0/0:15,0:15:39.13:0,39,580	1/1:4,15:19:18.20:498,18,0	0/0:13,0:14:33.11:0,33,503	0/1:23,0:23:34.84:35,0,74	0/0:19,0:19:48.13:0,48,681
chr10	84868286	.	A	AAG	8443.76	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=9.599;DP=683;FS=3.283;HRun=0;HaplotypeScore=164.7629;InbreedingCoeff=0.9499;MQ=60.44;MQ0=25;MQRankSum=-9.498;QD=28.62;ReadPosRankSum=-0.697;VQSLOD=5.5712;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:16:41.63:627,42,0	1/1:4,2:6:12:146,12,0	0/0:89,0:20:20.25:0,20,277	0/0:111,0:26:35.98:0,36,389	0/0:16,0:16:42.04:0,42,509	0/0:23,0:23:53.67:0,54,768	1/1:6,11:17:39.13:636,39,0	1/1:14,21:35:57.65:935,58,0	0/0:8,0:8:18.06:0,18,228	1/1:22,12:34:96.24:1445,96,0	1/1:18,10:27:51.10:747,51,0	0/0:20,0:20:54.16:0,54,686	0/0:15,0:15:42.12:0,42,519	0/0:7,0:7:18.06:0,18,234	0/0:19,0:19:51.13:0,51,619	1/1:5,12:19:33.11:527,33,0	1/1:11,5:16:16.81:318,17,0	0/0:13,0:12:30.10:0,30,387	1/1:8,14:22:45.15:763,45,0	1/1:7,15:22:37.19:660,37,0	1/1:2,16:18:29.59:435,30,0	1/1:3,12:15:33.58:520,34,0	0/0:15,0:15:45.13:0,45,569	0/0:15,0:15:36.10:0,36,454	0/1:18,0:18:1.31:1,0,96	0/0:16,0:16:39.09:0,39,467	1/1:6,19:25:42.14:683,42,0	0/0:19,0:19:48.16:0,48,622
chr10	84869222	.	G	GC	14681.84	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-16.837;DP=657;FS=4.258;HRun=1;HaplotypeScore=60.5442;InbreedingCoeff=0.9999;MQ=76.99;MQ0=0;MQRankSum=0.176;QD=40.45;ReadPosRankSum=0.315;VQSLOD=5.3624;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:90.30:1348,90,0	1/1:1,14:15:42.14:627,42,0	0/0:15,0:15:40.01:0,40,504	0/0:12,0:12:33.06:0,33,390	0/0:26,0:26:78.24:0,78,999	0/0:22,0:22:63.20:0,63,816	1/1:0,35:35:99:1484,99,0	1/1:1,38:39:99:1617,108,0	0/0:18,0:18:54.15:0,54,673	1/1:1,19:20:54.18:810,54,0	1/1:1,29:30:75.25:1121,75,0	0/0:27,0:27:81.25:0,81,1037	0/0:18,0:18:54.15:0,54,673	0/0:20,0:20:60.20:0,60,779	0/0:25,0:25:75.24:0,75,973	1/1:2,20:22:48.16:720,48,0	1/1:0,33:33:96.33:1439,96,0	0/0:29,0:29:87.28:0,87,1130	1/1:1,20:21:43.97:832,44,0	1/1:0,26:26:66.18:964,66,0	1/1:1,20:21:60.20:899,60,0	1/1:1,24:25:63.21:933,63,0	0/0:24,0:24:72.23:0,72,934	0/0:26,0:26:78.22:0,78,983	1/1:1,18:19:54.18:809,54,0	0/0:21,0:21:60.19:0,60,779	1/1:0,25:25:72.24:1079,72,0	0/0:11,0:11:33.07:0,33,398
chr10	84870006	.	T	TC	426.26	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.258;DP=455;FS=3.353;HRun=0;HaplotypeScore=64.6124;InbreedingCoeff=0.6917;MQ=51.63;MQ0=30;MQRankSum=-1.456;QD=15.22;ReadPosRankSum=0.677;VQSLOD=5.2160;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,22:26:37.86:521,38,0	0/0:3,0:3:9.03:0,9,122	0/0:16,0:6:11.99:0,12,131	0/0:18,0:8:12.93:0,13,143	0/0:18,0:16:23.96:0,24,313	0/0:14,0:12:33.38:0,33,354	0/0:13,0:12:32.20:0,32,388	0/0:31,0:27:64.99:0,65,790	0/0:7,0:7:17.83:0,18,181	0/0:20,0:18:51.17:0,51,698	0/0:26,0:26:71.87:0,72,957	0/0:7,0:7:19.86:0,20,203	0/0:14,0:13:35.47:0,35,357	0/0:14,0:11:32.21:0,32,352	0/0:16,0:13:35.39:0,35,406	0/0:8,0:7:12.04:0,12,168	0/0:31,0:30:66.11:0,66,836	0/0:22,0:20:49.50:0,49,483	0/0:14,0:12:12.54:0,13,371	0/0:35,0:33:49.72:0,50,517	0/0:6,0:3:9.03:0,9,122	0/0:4,0:3:9.03:0,9,125	0/0:6,0:6:18.06:0,18,247	0/0:8,0:8:5.62:0,6,83	0/0:20,0:18:48.16:0,48,662	0/0:27,0:27:49.48:0,49,542	0/0:21,0:19:21.46:0,21,450	0/0:8,0:8:24.08:0,24,331
chr10	84870023	.	T	TC	159.66	PASS	AB=0.961;AC=9;AF=0.167;AN=54;BaseQRankSum=2.701;DP=435;FS=3.463;HRun=0;HaplotypeScore=52.4366;InbreedingCoeff=-0.0329;MQ=40.88;MQ0=49;MQRankSum=3.361;QD=1.23;ReadPosRankSum=-0.237;VQSLOD=1.1979;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:18:24.43:0,24,151	0/0:5,0:5:11.35:0,11,63	0/0:10,0:3:2.98:0,3,21	0/0:16,0:6:1.99:0,2,29	0/0:23,0:20:35.83:0,36,284	0/0:19,0:16:41.70:0,42,314	0/0:15,0:13:29.01:0,29,189	0/1:28,0:23:99:125,0,110	0/0:5,0:5:14.87:0,15,107	0/0:18,0:15:27.82:0,28,278	0/1:22,0:22:4.61:5,0,269	0/1:5,0:5:34.33:43,0,34	0/0:12,0:11:26.67:0,27,200	0/1:12,0:8:5.10:5,0,142	0/0:16,0:12:35.80:0,36,278	./.	0/0:32,0:28:43.68:0,44,390	0/0:25,0:19:44.62:0,45,322	0/0:12,0:9:16.09:0,16,137	0/1:20,11:30:1.85:2,0,162	0/1:7,0:4:11.80:12,0,47	1/1:2,0:1:2.22:7,2,0	0/0:4,0:4:9.44:0,9,74	0/0:10,0:9:8.52:0,9,64	0/0:14,0:11:25.70:0,26,172	0/0:25,0:25:65.34:0,65,470	0/1:22,0:20:78.80:79,0,167	0/0:15,0:15:38.17:0,38,269
chr10	84871148	.	G	GT	2823.20	PASS	AB=0.932;AC=29;AF=0.558;AN=52;BaseQRankSum=5.620;DP=411;FS=1.570;HRun=11;HaplotypeScore=55.6139;InbreedingCoeff=0.6979;MQ=70.70;MQ0=6;MQRankSum=-2.083;QD=10.27;ReadPosRankSum=-0.909;VQSLOD=2.4485;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:4,6:10:17.95:169,18,0	0/0:31,0:13:7:0,7,63	0/1:22,0:10:5.70:6,0,16	0/0:21,1:24:28.33:0,28,388	0/0:12,0:11:29.89:0,30,232	1/1:6,0:6:5.19:20,5,0	1/1:14,2:34:55.45:291,55,0	0/1:7,1:9:10.48:10,0,101	1/1:7,12:19:12.82:304,13,0	1/1:0,7:7:21.04:208,21,0	0/0:5,0:5:11.93:0,12,91	0/0:5,0:5:14.94:0,15,116	0/0:10,0:11:22.95:0,23,167	0/0:9,0:9:23.91:0,24,186	1/1:2,3:5:11.92:107,12,0	1/1:8,33:40:62.99:621,63,0	0/0:21,1:23:41.55:0,42,300	1/1:4,2:18:33.82:216,34,0	1/1:2,1:17:37.22:214,37,0	1/1:2,0:5:5.80:33,6,0	1/1:2,0:3:2.84:14,3,0	./.	0/0:7,0:7:14.92:0,15,114	1/1:5,24:29:39.89:585,40,0	0/1:22,3:26:35.08:35,0,296	1/1:7,1:22:36.13:189,36,0	0/0:8,0:8:23.91:0,24,185
chr10	84871149	.	T	TTG	585.49	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=1.519;DP=411;FS=1.887;HRun=0;HaplotypeScore=71.0049;InbreedingCoeff=0.0106;MQ=70.60;MQ0=6;MQRankSum=-1.985;QD=4.27;ReadPosRankSum=-0.082;VQSLOD=2.3883;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:10,0:10:19.38:0,19,106	0/1:31,0:13:5.49:5,0,161	0/0:22,0:10:7.67:0,8,79	0/0:23,0:23:62.84:0,63,864	0/0:12,0:11:30.10:0,30,457	1/1:0,4:4:6.02:100,6,0	0/1:37,0:35:99:197,0,139	0/0:9,0:9:23.71:0,24,288	0/0:19,0:19:44.05:0,44,281	0/0:7,0:7:18.21:0,18,72	0/0:6,0:6:15.04:0,15,208	0/0:5,0:5:15.05:0,15,228	0/0:11,0:11:27.05:0,27,368	0/0:9,0:9:24.08:0,24,366	0/0:5,0:5:13.96:0,14,78	0/0:40,0:39:70.76:0,71,356	0/0:23,0:23:59.72:0,60,723	0/1:18,0:18:72.63:85,0,73	0/1:17,0:17:28.19:140,0,28	0/1:5,0:5:22.78:23,0,37	0/1:3,0:3:8.53:9,0,46	0/0:1,0:1:2.99:0,3,24	0/0:7,0:7:21.05:0,21,280	0/0:28,0:28:62.57:0,63,325	0/0:27,0:27:71.09:0,71,872	0/1:22,0:22:85.49:160,0,85	0/0:10,0:10:24.08:0,24,366
chr10	84871694	.	TA	T	343.76	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.614;DP=503;FS=6.649;HRun=9;HaplotypeScore=53.4655;InbreedingCoeff=0.9323;MQ=62.09;MQ0=0;MQRankSum=-0.732;QD=15.63;ReadPosRankSum=-0.318;VQSLOD=3.3436;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:48.02:439,48,0	0/0:7,0:7:18.04:0,18,198	0/0:5,0:5:9.03:0,9,104	0/0:10,0:10:22.88:0,23,246	0/0:20,0:20:51.14:0,51,576	0/0:22,0:22:60.17:0,60,684	0/0:14,0:13:36.11:0,36,415	0/0:17,0:17:42.12:0,42,476	0/0:16,0:16:48.13:0,48,543	0/0:38,0:38:99:0,102,1170	0/0:23,0:23:54.08:0,54,605	0/0:16,0:16:42.04:0,42,454	0/0:10,0:10:27.08:0,27,312	0/0:15,0:15:42.12:0,42,485	0/0:15,0:15:42.12:0,42,485	0/0:16,0:16:45.13:0,45,519	0/0:24,0:24:60.18:0,60,692	0/0:15,0:14:39.12:0,39,450	0/0:20,0:20:54.09:0,54,596	0/0:20,0:20:60.10:0,60,654	0/0:16,0:16:33.10:0,33,381	0/0:17,0:17:51.05:0,51,561	0/0:20,0:19:54.16:0,54,623	0/0:24,0:24:66.20:0,66,762	0/0:18,0:18:54.16:0,54,623	0/0:27,0:27:60.18:0,60,689	0/0:16,1:17:23.67:0,24,511	0/0:19,0:19:54.14:0,54,611
chr10	84871771	.	TACACAC	T	1254.56	PASS	AC=28;AF=0.778;AN=36;BaseQRankSum=1.651;DP=416;FS=21.671;HRun=0;HaplotypeScore=95.8974;InbreedingCoeff=0.4527;MQ=62.47;MQ0=12;MQRankSum=2.274;QD=6.71;ReadPosRankSum=3.548;VQSLOD=0.2196;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	1/1:11,0:11:3.01:39,3,0	1/1:12,0:12:3.48:48,3,0	0/0:20,0:19:0:0,0,0	1/1:16,0:15:13.75:214,14,0	./.	./.	1/1:17,0:16:3.01:51,3,0	1/1:10,0:10:14.97:203,15,0	1/1:9,0:9:2.95:19,3,0	1/1:19,0:19:20.98:238,21,0	1/1:14,0:15:3.01:42,3,0	1/1:13,0:14:3.01:42,3,0	1/1:10,0:9:5.99:71,6,0	./.	./.	0/0:6,0:6:3.01:0,3,81	1/1:14,0:11:9.03:157,9,0	./.	1/1:20,0:19:9.50:138,9,0	1/1:6,0:6:3.01:37,3,0	0/0:19,0:18:21.07:0,21,442	1/1:11,0:13:8.45:71,8,0	0/0:15,0:15:6.02:0,6,157
chr10	84871928	.	TA	T	1005.94	PASS	AB=0.914;AC=15;AF=0.278;AN=54;BaseQRankSum=10.603;DP=531;FS=4.376;HRun=1;HaplotypeScore=95.4559;InbreedingCoeff=-0.0445;MQ=51.40;MQ0=13;MQRankSum=0.056;QD=4.41;ReadPosRankSum=-2.230;VQSLOD=-0.2744;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,2:19:1.57:12,2,0	0/1:15,0:14:67.74:183,0,68	0/0:15,0:8:20.41:0,20,260	./.	0/0:14,0:14:35.68:0,36,449	0/0:21,0:20:32.83:0,33,710	0/1:2,10:18:13.04:115,0,13	0/1:15,4:16:52.86:53,0,273	0/0:24,0:24:63.19:0,63,954	0/1:22,0:22:99:189,0,160	0/1:15,0:15:61.17:168,0,61	0/0:21,0:21:46.97:0,47,699	0/0:26,0:26:72.23:0,72,1073	0/0:18,0:18:43.01:0,43,570	0/0:29,0:29:87.27:0,87,1290	0/1:25,0:22:99:206,0,132	0/1:19,2:21:99:113,0,172	0/0:14,0:13:39.11:0,39,582	0/1:8,1:7:11.09:11,0,99	0/1:13,2:15:0.81:1,0,90	0/1:23,0:19:6.41:6,0,130	0/1:13,0:11:18:18,0,66	0/0:14,0:13:10.32:0,10,467	0/0:42,0:42:99:0,111,1637	1/1:3,4:12:14.13:85,14,0	0/0:20,0:20:60.19:0,60,874	0/0:15,3:17:11.35:0,11,200	0/0:18,0:17:51.17:0,51,743
chr10	84871931	.	TA	T	3198.69	PASS	AB=0.903;AC=29;AF=0.518;AN=56;BaseQRankSum=12.961;DP=522;FS=1.773;HRun=1;HaplotypeScore=87.2307;InbreedingCoeff=0.6775;MQ=51.68;MQ0=10;MQRankSum=-1.725;QD=11.94;ReadPosRankSum=-0.884;VQSLOD=1.8256;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,2:16:2.48:21,2,0	1/1:2,3:16:39.01:390,39,0	0/0:16,0:9:14.43:0,14,174	0/0:13,0:4:3:0,3,30	0/1:12,1:13:10.63:11,0,312	0/0:19,0:19:24.53:0,25,598	1/1:9,10:18:21.03:234,21,0	1/1:15,4:17:24.93:187,25,0	0/0:25,0:25:66.19:0,66,910	1/1:3,5:20:49.31:520,49,0	1/1:0,3:14:36:335,36,0	0/0:20,2:22:38.01:0,38,658	0/0:25,0:25:69.20:0,69,941	0/1:17,1:18:22.31:22,0,405	0/0:27,0:28:58.84:0,59,1070	1/1:3,5:22:11.99:490,12,0	1/1:4,8:21:4.15:480,4,0	0/0:15,0:14:38.87:0,39,518	1/1:6,2:7:6.53:66,7,0	0/1:2,3:15:37.64:38,0,81	1/1:5,2:19:14.28:145,14,0	1/1:1,1:9:11.06:92,11,0	0/0:12,0:13:6.12:0,6,388	0/0:40,1:41:67.96:0,68,1383	1/1:8,3:12:14.86:116,15,0	0/0:19,0:19:51.14:0,51,680	1/1:2,9:18:29.14:261,29,0	0/0:17,0:16:48.08:0,48,586
chr10	84872224	.	CT	C	287.51	PASS	AB=0.859;AC=4;AF=0.071;AN=56;BaseQRankSum=4.897;DP=541;FS=0.785;HRun=10;HaplotypeScore=61.9956;InbreedingCoeff=0.3980;MQ=75.72;MQ0=0;MQRankSum=-0.655;QD=6.53;ReadPosRankSum=-0.952;VQSLOD=1.1835;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:78.17:0,78,836	0/0:13,0:13:36.10:0,36,398	0/1:16,2:16:34.07:34,0,108	0/0:22,0:21:30.83:0,31,333	0/0:26,0:26:58.40:0,58,633	0/0:12,0:13:35.93:0,36,379	0/0:11,1:12:4.03:0,4,273	0/0:25,0:25:64.37:0,64,679	0/0:17,0:17:42.10:0,42,456	0/0:31,0:31:84.23:0,84,929	0/0:23,0:23:57.15:0,57,630	0/1:7,2:9:5.48:5,0,178	0/0:15,0:15:39.11:0,39,431	0/0:24,0:24:51.11:0,51,545	0/0:16,0:16:42.11:0,42,464	0/0:15,0:15:39.11:0,39,431	0/0:16,0:16:42.11:0,42,464	0/0:20,0:20:34.24:0,34,604	0/0:21,0:23:49.03:0,49,557	0/0:16,2:18:2.11:0,2,471	0/0:14,0:14:36.06:0,36,378	0/0:23,0:23:63.12:0,63,676	0/0:14,0:14:27.07:0,27,299	0/0:16,0:16:42.09:0,42,453	1/1:4,13:17:41.94:358,42,0	0/0:27,2:29:17.13:0,17,645	0/0:27,0:27:78.20:0,78,854	0/0:7,0:8:17.88:0,18,180
chr10	84872294	.	G	GTTT	1171.86	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-3.835;DP=643;FS=0.753;HRun=7;HaplotypeScore=94.8668;InbreedingCoeff=0.6699;MQ=71.33;MQ0=3;MQRankSum=1.095;QD=18.31;ReadPosRankSum=1.157;VQSLOD=0.2042;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,30:35:63.17:1264,63,0	0/0:17,0:17:51.14:0,51,675	0/1:29,0:20:9.86:10,0,198	0/0:36,0:25:25.11:0,25,341	0/0:36,0:36:99:0,99,1348	0/0:19,0:19:51.16:0,51,695	0/0:15,0:15:42.14:0,42,569	0/0:31,0:31:60.20:0,60,919	0/0:17,0:18:48.08:0,48,632	0/0:34,0:34:99:0,99,1320	0/0:32,0:32:96.32:0,96,1298	0/0:27,0:27:75.23:0,75,1007	0/0:14,0:14:36.11:0,36,491	0/0:20,0:20:51.16:0,51,691	0/0:22,0:22:60.17:0,60,796	0/0:16,0:16:39.12:0,39,531	0/0:16,0:16:42.05:0,42,548	0/0:20,0:20:51.16:0,51,693	0/0:22,0:20:48.13:0,48,651	0/0:22,0:22:57.18:0,57,776	0/0:22,0:22:51.15:0,51,694	0/0:25,0:25:63.19:0,63,857	0/0:15,0:15:39.12:0,39,529	0/0:17,0:19:40.46:0,40,531	0/0:16,0:16:39.07:0,39,531	0/0:28,0:28:75.23:0,75,1006	0/0:25,0:23:66.19:0,66,881	0/0:11,0:11:33.11:0,33,450
chr10	84872641	.	TA	T	3191.10	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.101;DP=564;FS=4.321;HRun=11;HaplotypeScore=55.4287;InbreedingCoeff=0.9500;MQ=59.88;MQ0=0;MQRankSum=0.552;QD=17.53;ReadPosRankSum=0.824;VQSLOD=4.6315;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,33:45:99:895,108,0	0/0:12,2:14:8.43:0,8,287	0/0:12,0:9:14.86:0,15,133	0/0:7,0:6:9.02:0,9,95	0/0:36,0:36:87.19:0,87,915	0/0:20,0:20:54.07:0,54,561	0/0:14,0:14:33.08:0,33,351	1/1:8,28:34:77.86:634,78,0	0/0:18,0:18:48.09:0,48,496	0/0:29,1:30:41.51:0,42,642	0/0:21,2:23:17.24:0,17,588	0/0:15,0:15:33.06:0,33,338	0/0:12,0:12:27.04:0,27,272	0/0:18,0:18:48.11:0,48,505	0/0:10,0:10:30.07:0,30,317	0/0:11,1:12:11.45:0,11,327	0/0:24,0:24:63.63:0,64,673	0/0:17,0:17:48.03:0,48,487	1/1:5,14:19:12.96:313,13,0	1/1:3,18:21:53.89:438,54,0	1/1:3,13:16:29.96:246,30,0	1/1:0,9:9:26.97:221,27,0	0/0:19,0:19:45.07:0,45,461	0/0:10,1:11:8.41:0,8,279	0/0:20,0:21:60.01:0,60,616	0/0:28,0:27:72.17:0,72,761	1/1:5,31:36:77.45:640,77,0	0/0:19,0:21:44.03:0,44,535
chr10	84872713	.	AC	A	1322.89	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.633;DP=619;FS=4.322;HRun=2;HaplotypeScore=69.5799;InbreedingCoeff=0.9988;MQ=84.96;MQ0=0;MQRankSum=-3.458;QD=32.27;ReadPosRankSum=1.260;VQSLOD=3.5604;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,39:41:99:1418,111,0	0/0:11,0:11:33.11:0,33,494	0/0:19,0:19:57.06:0,57,769	0/0:25,0:25:69.19:0,69,974	0/0:45,0:45:99:0,129,1851	0/0:17,0:17:51.17:0,51,764	0/0:18,0:18:54.17:0,54,790	0/0:37,0:37:99:0,108,1583	0/0:22,0:22:66.22:0,66,989	0/0:24,0:24:72.23:0,72,1060	0/0:21,0:21:60.20:0,60,899	0/0:18,0:18:51.16:0,51,744	0/0:11,0:11:30.10:0,30,449	0/0:24,0:24:72.24:0,72,1073	0/0:20,0:20:60.19:0,60,878	0/0:24,0:24:72.24:0,72,1078	0/0:14,0:14:42.12:0,42,590	0/0:13,0:13:39.12:0,39,564	0/0:22,0:22:66.21:0,66,968	0/0:36,0:36:99:0,105,1548	0/0:16,0:16:45.14:0,45,654	0/0:14,0:14:42.13:0,42,609	0/0:20,0:20:57.19:0,57,850	0/0:24,0:24:65.81:0,66,989	0/0:26,0:26:72.24:0,72,1078	0/0:16,0:16:45.15:0,45,674	0/0:28,0:27:72.24:0,72,1078	0/0:13,0:13:33.11:0,33,494
chr10	84873109	.	CTT	C	1244.13	PASS	AB=0.850;AC=13;AF=0.232;AN=56;BaseQRankSum=7.100;DP=495;FS=7.308;HRun=15;HaplotypeScore=72.0162;InbreedingCoeff=0.7707;MQ=64.30;MQ0=3;MQRankSum=3.475;QD=10.03;ReadPosRankSum=5.975;VQSLOD=1.9014;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:31:40.43:230,40,0	1/1:1,2:3:2.96:26,3,0	0/0:10,0:8:6.90:0,7,71	0/0:14,0:11:3.42:0,3,47	0/1:14,1:17:2.96:3,0,188	0/0:21,0:21:41.49:0,41,445	0/0:12,0:15:30.03:0,30,356	0/0:28,0:32:50.30:0,50,439	0/0:17,1:18:9.68:0,10,420	1/1:5,9:14:22.70:190,23,0	1/1:2,13:15:32.84:282,33,0	0/0:15,0:17:30.32:0,30,341	0/0:21,0:20:25.44:0,25,546	0/0:12,0:13:34.92:0,35,352	0/0:25,0:27:66.05:0,66,780	1/1:5,9:15:3.51:173,4,0	1/1:5,22:29:47.58:511,48,0	0/0:18,1:19:12.37:0,12,388	0/0:5,0:12:23.32:0,23,205	0/0:6,0:16:23.95:0,24,220	0/0:8,0:14:21:0,21,211	0/0:2,0:7:9.90:0,10,87	0/0:15,0:15:24.70:0,25,294	0/0:24,0:24:57.12:0,57,692	0/0:10,0:13:20.50:0,20,203	0/0:11,1:25:18.93:0,19,364	0/0:9,0:30:44.98:0,45,419	0/0:3,0:3:6.02:0,6,72
chr10	84873473	.	A	ACC	1725.36	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-2.506;DP=434;FS=9.727;HRun=8;HaplotypeScore=59.0146;InbreedingCoeff=0.9331;MQ=71.39;MQ0=0;MQRankSum=-0.211;QD=15.83;ReadPosRankSum=-2.782;VQSLOD=-0.0132;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:44:71.40:0,71,311	0/0:5,0:5:12.03:0,12,134	0/0:17,0:16:36:0,36,367	0/0:16,0:16:24.52:0,25,237	0/0:15,0:15:42.10:0,42,468	0/0:15,0:15:42.11:0,42,468	1/1:3,0:18:27.45:95,27,0	1/1:3,9:14:26.51:320,27,0	0/0:16,0:16:36.08:0,36,401	0/0:11,0:11:24.05:0,24,268	0/0:9,0:9:24.05:0,24,268	0/0:14,0:14:36.07:0,36,389	0/0:8,0:8:12.02:0,12,134	0/0:14,0:14:36.08:0,36,401	0/0:14,0:14:33.08:0,33,366	0/0:14,0:14:38.67:0,39,424	0/0:20,0:20:54.13:0,54,601	0/0:17,0:17:48.06:0,48,510	1/1:3,0:4:3.01:48,3,0	1/1:1,7:9:12.02:167,12,0	1/1:5,23:29:35.88:558,36,0	1/1:2,0:6:9.01:86,9,0	0/0:15,0:15:42.06:0,42,454	0/0:35,0:35:93.22:0,93,1037	1/1:2,0:16:22.46:77,22,0	0/0:19,0:19:48.11:0,48,520	1/1:1,12:13:36.12:571,36,0	0/0:6,0:6:9.02:0,9,100
chr10	84876422	.	CCAGTCCCAGGGTT	C	9557.56	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.902;DP=611;FS=6.270;HRun=0;HaplotypeScore=225.9239;InbreedingCoeff=0.9988;MQ=83.83;MQ0=0;MQRankSum=-12.961;QD=81.00;ReadPosRankSum=0.568;VQSLOD=4.1222;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,175,10328	1/1:1,11:12:30.10:1208,30,0	0/0:19,0:19:48.13:0,48,2075	0/0:23,0:23:63.22:0,63,2753	0/0:19,0:19:57.18:0,57,3607	0/0:19,0:19:54.19:0,54,3338	1/1:3,14:17:36.12:1450,36,0	0/0:17,0:17:51.15:0,51,2685	0/0:16,0:16:48.15:0,48,2780	1/1:5,24:29:69.15:2296,69,0	1/1:0,8:8:21.07:736,21,0	0/0:19,0:19:57.20:0,57,3654	0/0:21,0:21:57.20:0,57,3652	0/0:20,0:20:60.19:0,60,3569	0/0:21,0:21:63.22:0,63,3925	1/1:2,14:16:36.12:1450,36,0	1/1:4,19:23:30.10:1208,30,0	0/0:41,0:41:99:0,120,7617	0/0:16,0:16:42.12:0,42,2218	0/0:17,0:17:51.18:0,51,3078	0/0:34,0:34:96.33:0,96,5885	0/0:15,0:15:39.13:0,39,2398	0/0:10,0:10:30.10:0,30,1801	0/0:30,0:30:87.28:0,87,5264	1/1:0,13:13:30.10:1208,30,0	0/0:26,0:26:78.27:0,78,5043	0/0:28,0:27:81.28:0,81,5189	0/0:23,0:23:63.20:0,63,3277
chr10	84877865	.	T	TAA	6887.51	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.268;DP=496;FS=14.755;HRun=0;HaplotypeScore=99.4948;InbreedingCoeff=0.9295;MQ=69.67;MQ0=1;MQRankSum=-11.194;QD=54.23;ReadPosRankSum=-0.609;VQSLOD=3.7700;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,37:38:99:2077,108,0	0/0:10,0:10:5.57:0,6,238	0/0:9,0:9:18.02:0,18,253	0/0:8,0:8:9.12:0,9,177	0/0:32,0:32:90.28:0,90,1418	0/0:14,0:14:42.13:0,42,661	0/0:15,0:15:31.74:0,32,392	1/1:1,25:26:75.25:1443,75,0	0/0:24,0:24:69.24:0,69,1122	0/0:27,0:27:79.81:0,80,883	0/0:12,0:11:29.77:0,30,276	0/0:25,0:25:69.21:0,69,1075	0/0:13,0:13:39.13:0,39,633	0/0:21,0:21:63.20:0,63,1003	0/0:19,0:19:57.19:0,57,924	0/0:12,0:12:30.07:0,30,320	0/0:25,0:25:45.26:0,45,633	0/0:23,0:23:69.20:0,69,1097	1/1:0,16:17:48.16:968,48,0	1/1:0,19:20:60.21:1193,60,0	1/1:0,6:6:12.04:242,12,0	1/1:0,3:3:6.02:119,6,0	0/0:8,0:8:24.07:0,24,367	0/0:21,0:21:63.22:0,63,1025	0/0:21,0:21:8.43:0,8,527	0/0:24,0:24:69.23:0,69,1103	1/1:1,15:16:42.12:845,42,0	0/0:6,0:6:18.06:0,18,293
chr10	84877870	.	C	CTAAT	13025.35	PASS	AB=0.981;AC=30;AF=0.536;AN=56;BaseQRankSum=2.182;DP=539;FS=20.276;HRun=0;HaplotypeScore=105.7560;InbreedingCoeff=0.8444;MQ=70.76;MQ0=1;MQRankSum=-8.774;QD=41.09;ReadPosRankSum=-0.967;VQSLOD=3.4375;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:22,21:42:99:2151,108,0	1/1:2,8:10:18.06:459,18,0	0/0:10,0:11:8.91:0,9,162	0/1:10,0:11:3.13:3,0,81	0/0:32,0:32:66.18:0,66,1062	0/0:17,0:17:42.10:0,42,650	1/1:5,10:15:21.07:535,21,0	1/1:25,3:27:56.97:872,57,0	0/0:23,0:23:42.12:0,42,679	1/1:5,27:33:84.21:1790,84,0	1/1:0,13:13:30.02:705,30,0	0/0:25,0:25:54.13:0,54,857	0/0:13,0:13:30.10:0,30,520	0/0:23,0:23:60.16:0,60,966	0/0:20,0:20:54.17:0,54,917	1/1:0,13:13:27.09:689,27,0	1/1:3,26:30:57.20:1454,57,0	0/0:24,0:24:63.18:0,63,1041	1/1:8,12:20:60.07:1185,60,0	1/1:9,13:22:57.15:1162,57,0	1/1:5,2:7:9.01:175,9,0	1/1:2,0:2:6.01:74,6,0	0/0:6,0:6:18.06:0,18,312	0/0:22,0:22:51.16:0,51,865	1/1:6,16:24:30.10:763,30,0	0/1:25,1:26:99:181,0,1020	1/1:12,7:19:41.99:828,42,0	0/0:6,0:6:15.05:0,15,263
chr10	84878149	.	C	CA	1155.80	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.836;DP=632;FS=0.000;HRun=0;HaplotypeScore=65.7504;InbreedingCoeff=0.9902;MQ=90.96;MQ0=0;MQRankSum=-5.226;QD=30.42;ReadPosRankSum=3.238;VQSLOD=3.4989;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,37:38:99:1251,99,0	0/0:10,0:10:30.09:0,30,401	0/0:25,0:25:69.90:0,70,851	0/0:26,0:26:65:0,65,870	0/0:28,0:28:78.14:0,78,1009	0/0:20,0:20:57.19:0,57,796	0/0:27,0:27:78.25:0,78,1073	0/0:28,0:28:81.21:0,81,1076	0/0:23,0:23:69.23:0,69,963	0/0:33,0:33:93.28:0,93,1274	0/0:13,0:13:39.13:0,39,540	0/0:22,0:22:63.21:0,63,879	0/0:12,0:12:33.10:0,33,444	0/0:16,0:16:48.15:0,48,654	0/0:12,0:12:33.07:0,33,439	0/0:14,0:14:42.14:0,42,587	0/0:38,0:38:99:0,111,1529	0/0:37,0:37:99:0,111,1532	0/0:31,0:31:87.28:0,87,1190	0/0:19,0:19:51.17:0,51,707	0/0:29,0:29:81.23:0,81,1076	0/0:7,0:7:18.06:0,18,252	0/0:12,0:12:36.06:0,36,463	0/0:41,0:41:99:0,117,1613	0/0:10,0:10:30.10:0,30,419	0/0:25,0:25:72.04:0,72,924	0/0:24,0:24:60.20:0,60,835	0/0:12,0:12:36.12:0,36,502
chr10	84878150	.	G	GT	977.18	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.472;DP=624;FS=0.650;HRun=1;HaplotypeScore=65.9609;InbreedingCoeff=0.9902;MQ=92.34;MQ0=0;MQRankSum=-3.514;QD=26.41;ReadPosRankSum=2.623;VQSLOD=3.5974;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,34:37:99:1072,100,0	0/0:10,0:10:30.10:0,30,387	0/0:26,0:26:61.87:0,62,732	0/0:27,0:27:67.86:0,68,863	0/0:26,0:26:69.18:0,69,875	0/0:20,0:20:57.19:0,57,739	0/0:27,0:27:78.22:0,78,993	0/0:25,0:25:75.23:0,75,947	0/0:23,0:23:69.21:0,69,879	0/0:33,0:33:96.08:0,96,1194	0/0:13,0:13:39.13:0,39,503	0/0:23,0:23:66.19:0,66,837	0/0:12,0:12:33.08:0,33,400	0/0:15,0:15:45.13:0,45,569	0/0:12,0:12:36.10:0,36,452	0/0:14,0:14:42.14:0,42,545	0/0:37,0:37:99:0,111,1432	0/0:37,0:37:99:0,111,1405	0/0:31,0:31:93.26:0,93,1155	0/0:19,0:19:51.15:0,51,646	0/0:26,0:26:72.20:0,72,900	0/0:8,0:8:18.06:0,18,234	0/0:11,0:11:33.09:0,33,412	0/0:41,0:41:99:0,120,1525	0/0:10,0:10:30.10:0,30,389	0/0:25,0:25:75.21:0,75,936	0/0:24,0:24:66.18:0,66,824	0/0:12,0:12:36.12:0,36,467
chr10	84878795	.	G	GT	2281.42	PASS	AB=0.951;AC=19;AF=0.339;AN=56;BaseQRankSum=7.076;DP=598;FS=0.801;HRun=10;HaplotypeScore=76.7865;InbreedingCoeff=0.8256;MQ=75.15;MQ0=3;MQRankSum=-3.471;QD=10.23;ReadPosRankSum=-1.742;VQSLOD=2.5337;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,36:46:50.55:743,51,0	0/1:9,1:12:0.95:1,0,178	0/0:44,0:31:45.84:0,46,442	0/0:30,0:16:17.17:0,17,176	0/0:25,0:25:57.37:0,57,468	0/0:18,0:18:50.92:0,51,416	0/0:21,0:22:52.96:0,53,424	1/1:9,0:24:46.24:248,46,0	0/0:20,0:20:47.92:0,48,393	0/0:16,0:16:38.95:0,39,320	0/0:10,0:10:29.46:0,29,230	0/0:25,0:24:58.38:0,58,453	0/1:12,1:13:5.02:5,0,170	0/0:14,0:14:23:0,23,258	0/0:23,0:23:59.91:0,60,492	0/0:16,0:16:26.92:0,27,221	0/0:23,0:23:47.05:0,47,394	0/0:24,0:25:55.93:0,56,449	1/1:17,0:25:29.10:176,29,0	1/1:8,1:23:55.23:302,55,0	1/1:9,0:14:29.43:141,29,0	1/1:5,1:11:16.86:103,17,0	0/0:16,0:16:44.95:0,45,369	0/0:22,0:22:47.86:0,48,390	1/1:3,18:21:45.11:480,45,0	0/0:25,0:25:57.04:0,57,478	1/1:6,1:21:51.46:282,51,0	0/1:11,0:11:5.27:5,0,105
chr10	84878865	.	G	GAAGA	7698.56	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-10.219;DP=581;FS=0.000;HRun=0;HaplotypeScore=91.2296;InbreedingCoeff=0.9992;MQ=59.85;MQ0=4;MQRankSum=-2.278;QD=63.62;ReadPosRankSum=-0.433;VQSLOD=6.1177;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,114,2096	0/0:10,0:10:30.08:0,30,526	0/0:18,0:11:24.82:0,25,449	0/0:29,0:20:51.16:0,51,873	0/0:19,0:19:54.19:0,54,1007	0/0:17,0:17:48.15:0,48,864	0/0:24,0:24:66.22:0,66,1197	1/1:5,14:21:54.11:1292,54,0	0/0:18,0:18:51.16:0,51,920	0/0:23,0:23:63.20:0,63,1115	0/0:9,0:9:27.09:0,27,504	0/0:19,0:19:57.20:0,57,1056	0/0:14,0:14:42.12:0,42,751	0/0:20,0:20:54.18:0,54,977	0/0:27,0:27:78.27:0,78,1455	0/0:17,0:17:51.17:0,51,922	0/0:21,0:21:60.18:0,60,1086	0/0:28,0:28:84.29:0,84,1561	1/1:3,9:18:51.14:1200,51,0	1/1:2,19:23:57.14:1411,57,0	1/1:1,23:28:63.06:1554,63,0	1/1:2,9:11:30.06:699,30,0	0/0:26,0:26:75.24:0,75,1368	0/0:25,0:25:72.25:0,72,1342	0/0:18,0:18:51.17:0,51,951	0/0:19,0:19:57.20:0,57,1053	1/1:1,19:20:60.19:1543,60,0	0/0:14,0:14:42.11:0,42,718
chr10	84879239	.	CTTGT	C	4929.55	PASS	AB=0.943;AC=16;AF=0.286;AN=56;BaseQRankSum=12.257;DP=768;FS=0.811;HRun=0;HaplotypeScore=124.2173;InbreedingCoeff=0.8165;MQ=64.64;MQ0=0;MQRankSum=-0.073;QD=22.11;ReadPosRankSum=-0.269;VQSLOD=4.6582;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,28:35:78.26:1244,78,0	0/0:11,0:11:21.07:0,21,467	0/0:24,0:17:9.81:0,10,383	0/0:20,0:19:30.10:0,30,684	0/0:19,0:19:45.15:0,45,1028	0/0:20,0:20:30.10:0,30,727	0/0:15,0:41:69.23:0,69,1219	1/1:14,9:23:27.09:434,27,0	0/0:42,1:43:44.67:0,45,2089	0/0:38,0:38:66.23:0,66,1493	0/0:12,0:12:21.07:0,21,506	0/1:19,1:20:18.54:19,0,622	0/0:29,0:29:57.20:0,57,1343	0/0:33,0:33:75.24:0,75,1762	0/0:39,0:39:81.26:0,81,1856	0/0:39,0:39:93.32:0,93,2226	0/0:49,0:49:99:0,105,2469	0/0:30,0:30:18.07:0,18,1415	1/1:13,7:20:21.07:331,21,0	1/1:10,11:21:33.07:494,33,0	1/1:14,37:51:87.30:1411,87,0	1/1:4,13:18:32.93:399,33,0	0/1:13,1:14:15.53:16,0,693	0/0:33,1:34:35.58:0,36,1748	0/0:17,0:17:27.09:0,27,613	0/0:34,0:34:27.74:0,28,1116	1/1:5,16:21:36.12:584,36,0	0/0:13,0:13:27.09:0,27,654
chr10	84879511	.	AGTGTGTGTGTGTGTGTGTGTGTGT	A	3169.49	PASS	AB=0.921;AC=10;AF=0.179;AN=56;BaseQRankSum=7.671;DP=514;FS=4.393;HRun=0;HaplotypeScore=274.3046;InbreedingCoeff=0.6740;MQ=61.30;MQ0=15;MQRankSum=-7.093;QD=23.13;ReadPosRankSum=2.054;VQSLOD=1.7157;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:45.09:0,45,1965	0/0:11,0:11:12.51:0,13,1227	0/0:18,0:11:9.03:0,9,221	0/0:14,0:13:24.08:0,24,850	0/0:19,0:19:42.14:0,42,3480	0/0:16,0:15:30.96:0,31,2427	0/0:18,0:17:22.79:0,23,1452	0/1:27,0:27:90.71:91,0,187	0/0:6,0:6:18.05:0,18,1485	0/0:30,0:29:63.22:0,63,5386	0/0:13,0:13:21.06:0,21,1389	0/0:10,0:9:18.05:0,18,1354	0/0:16,0:16:39.13:0,39,3610	0/0:13,0:13:21.94:0,22,1523	0/0:8,0:8:15.05:0,15,1299	0/0:18,0:18:24.97:0,25,2077	0/0:29,0:29:51.15:0,51,3779	0/0:17,0:16:36.11:0,36,3166	1/1:12,10:21:22.28:479,22,0	1/1:5,15:20:18.06:1107,18,0	1/1:10,21:30:3.01:189,3,0	1/1:8,13:20:15.05:885,15,0	0/0:10,0:10:24.08:0,24,2109	0/0:25,0:24:42.14:0,42,3448	0/0:13,0:13:18.06:0,18,1488	0/0:19,0:18:41.80:0,42,3721	0/1:13,3:16:23.94:577,0,24	0/0:10,0:9:27.07:0,27,2485
chr10	84879545	.	TGTGTGTGC	T	688.68	PASS	AB=1.000;AC=12;AF=0.231;AN=52;BaseQRankSum=6.670;DP=501;FS=1.330;HRun=0;HaplotypeScore=144.6954;InbreedingCoeff=0.0939;MQ=48.41;MQ0=23;MQRankSum=-2.852;QD=2.66;ReadPosRankSum=2.297;VQSLOD=2.8186;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,35:48:9.50:209,10,0	0/1:12,0:12:24.55:25,0,319	./.	./.	0/0:19,0:19:24.48:0,24,872	0/0:16,0:13:9.46:0,9,546	0/0:15,0:14:3.04:0,3,315	0/0:11,0:10:15.22:0,15,117	0/0:10,0:10:18.04:0,18,425	0/1:34,0:32:15.60:16,0,1112	0/0:10,0:10:1.50:0,1,389	0/0:9,0:8:14.84:0,15,306	0/0:17,0:17:39.99:0,40,1083	0/0:13,0:13:21.04:0,21,384	0/0:6,0:6:12.04:0,12,388	0/0:13,0:13:18.06:0,18,493	0/1:25,0:25:30.78:31,0,813	0/0:20,0:18:37.16:0,37,1155	0/1:19,0:16:26.65:68,0,27	0/1:23,0:23:5.65:181,0,6	0/1:46,0:43:31.93:36,0,32	1/1:23,0:21:14.55:152,15,0	0/0:11,0:11:19.42:0,19,509	0/0:27,0:26:56.65:0,57,1128	0/1:21,0:21:14.22:14,0,99	0/0:22,0:20:58.97:0,59,1277	0/1:7,0:7:18.11:109,0,18	0/0:17,0:14:30.01:0,30,841
chr10	84879551	.	TGC	T	353.08	PASS	AB=0.975;AC=16;AF=0.286;AN=56;BaseQRankSum=3.278;DP=493;FS=27.919;HRun=0;HaplotypeScore=112.3996;InbreedingCoeff=0.1101;MQ=52.24;MQ0=19;MQRankSum=0.372;QD=1.65;ReadPosRankSum=0.984;VQSLOD=0.6030;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:47,0:46:8.95:69,9,0	0/1:11,1:12:7.72:44,0,8	0/0:2,0:1:1.55:0,2,4	0/1:5,0:3:0:0,0,0	0/0:15,0:15:11.15:0,11,179	0/1:14,0:11:5.44:5,0,117	0/1:17,0:16:3.85:4,0,67	0/0:15,0:14:22.58:0,23,108	0/1:7,0:7:16.76:17,0,40	1/1:27,2:28:11.81:166,12,0	0/1:9,1:10:8.67:32,0,9	0/1:7,0:6:1.96:2,0,39	0/0:15,0:15:13.38:0,13,161	0/1:11,0:11:11.80:12,0,54	0/0:6,0:6:6:0,6,53	0/1:12,0:12:7.34:7,0,38	0/1:21,2:23:16.85:136,0,17	0/0:20,0:18:17.75:0,18,302	0/0:21,0:19:10.58:0,11,54	0/0:25,0:25:16.61:0,17,57	0/0:50,0:47:8.98:0,9,45	0/0:23,0:21:1.28:0,1,10	0/0:11,0:11:3.90:0,4,43	0/0:28,0:27:40.96:0,41,322	1/1:19,0:19:0.47:1,0,0	0/0:23,0:21:18.86:0,19,283	0/0:7,0:7:5.36:0,5,33	0/0:18,0:15:9.78:0,10,147
chr10	84879571	.	C	CAT	2271.12	PASS	AB=1.000;AC=14;AF=0.259;AN=54;BaseQRankSum=3.194;DP=497;FS=18.985;HRun=0;HaplotypeScore=122.1048;InbreedingCoeff=0.8569;MQ=70.58;MQ0=11;MQRankSum=-3.564;QD=15.04;ReadPosRankSum=-0.970;VQSLOD=2.2132;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:35.95:0,36,487	0/0:8,0:8:17.85:0,18,160	0/1:4,0:3:2.08:2,0,67	0/1:16,0:15:1.73:2,0,155	0/0:22,0:22:49.98:0,50,721	0/0:13,0:12:31.72:0,32,375	0/0:18,0:17:36.05:0,36,448	1/1:0,16:16:47.82:503,48,0	0/0:7,0:7:11.96:0,12,166	0/0:17,0:17:47.02:0,47,415	0/0:10,0:10:20.32:0,20,219	0/0:19,0:19:42.08:0,42,553	0/0:13,0:13:36.06:0,36,489	0/0:9,0:9:20.95:0,21,320	0/0:5,0:5:15.05:0,15,224	0/0:10,0:10:23.92:0,24,278	0/0:24,0:24:59.80:0,60,607	0/0:24,0:23:63.21:0,63,928	1/1:19,0:19:50.69:598,51,0	1/1:25,0:25:40.58:381,41,0	1/1:41,0:39:47.90:606,48,0	1/1:17,0:15:11.13:54,11,0	0/0:8,0:8:18:0,18,228	0/0:29,0:28:66.18:0,66,1000	./.	0/0:23,0:22:60.04:0,60,814	1/1:13,0:12:29.20:307,29,0	0/0:29,0:26:69.15:0,69,978
chr10	84880307	.	A	AAAAC	2157.88	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.417;DP=663;FS=1.450;HRun=0;HaplotypeScore=101.8517;InbreedingCoeff=0.9562;MQ=66.65;MQ0=3;MQRankSum=1.303;QD=32.70;ReadPosRankSum=0.343;VQSLOD=3.7518;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,26:38:75.26:1795,75,0	0/0:9,0:9:18.06:0,18,287	0/0:28,0:24:8.99:0,9,115	0/0:19,0:16:23.79:0,24,333	0/0:29,0:29:72.22:0,72,1102	0/0:20,0:20:45.14:0,45,693	1/1:16,9:28:21.07:484,21,0	0/0:33,0:33:39.02:0,39,496	0/0:23,0:23:39.13:0,39,621	0/0:33,0:33:63.15:0,63,888	0/0:24,0:24:42.13:0,42,643	0/0:22,0:22:33.06:0,33,492	0/0:22,0:22:51.17:0,51,812	0/0:24,0:24:54.14:0,54,828	0/0:27,0:27:57.18:0,57,885	0/0:27,0:27:60.20:0,60,955	0/0:26,0:26:43.01:0,43,632	0/0:16,0:16:33.06:0,33,474	0/0:16,0:16:21.02:0,21,313	0/0:28,0:28:48.16:0,48,764	0/0:28,0:28:48.16:0,48,763	0/0:14,0:14:27.09:0,27,430	0/0:16,0:16:36.05:0,36,509	0/0:41,0:41:63.29:0,63,1167	0/0:5,0:17:27.03:0,27,252	0/0:23,0:23:54.16:0,54,809	0/0:26,0:26:54.18:0,54,860	0/0:6,0:6:18.06:0,18,287
chr10	84880541	.	A	AC	1009.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.268;DP=657;FS=1.553;HRun=5;HaplotypeScore=66.2916;InbreedingCoeff=0.9967;MQ=84.97;MQ0=0;MQRankSum=-4.591;QD=28.84;ReadPosRankSum=1.139;VQSLOD=4.0247;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:35:84.27:1104,84,0	0/0:10,0:10:27.07:0,27,290	0/0:29,0:29:78.14:0,78,809	0/0:25,0:25:51.12:0,51,544	0/0:31,0:31:84.19:0,84,894	0/0:23,0:23:66.15:0,66,701	0/0:33,0:33:99:0,99,1055	0/0:31,0:31:84.18:0,84,882	0/0:19,0:19:54.12:0,54,572	0/0:29,0:29:81.20:0,81,865	0/0:20,0:20:54.14:0,54,580	0/0:12,0:12:36.06:0,36,371	0/0:10,0:10:24.04:0,24,249	0/0:19,0:19:45.11:0,45,483	0/0:19,0:19:48.12:0,48,516	0/0:36,0:36:99:0,99,1034	0/0:22,0:22:66.17:0,66,709	0/0:20,0:20:57.11:0,57,601	0/0:27,0:27:69.16:0,69,733	0/0:15,0:15:45.11:0,45,484	0/0:34,0:34:96.22:0,96,1023	0/0:23,0:23:66.17:0,66,710	0/0:17,0:17:51.13:0,51,545	0/0:34,0:34:99:0,99,1057	0/0:15,0:15:42.09:0,42,444	0/0:28,0:28:75.17:0,75,793	0/0:22,0:22:63.16:0,63,677	0/0:19,0:19:57.14:0,57,613
chr10	84880905	.	TTAGACGTTATAGTCCGTC	T	1049.47	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.838;DP=925;FS=0.000;HRun=0;HaplotypeScore=422.1687;InbreedingCoeff=0.9980;MQ=83.89;MQ0=0;MQRankSum=-4.704;QD=61.73;ReadPosRankSum=0.425;VQSLOD=2.2555;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,172,13567	0/0:17,0:17:48.14:0,48,3251	0/0:28,0:28:75.19:0,75,4716	0/0:34,0:34:96.24:0,96,5500	0/0:28,0:28:81.28:0,81,6228	0/0:19,0:19:51.10:0,51,3840	0/0:22,0:22:60.21:0,60,4270	0/0:34,0:34:99:0,99,6961	0/0:37,0:37:99:0,108,8196	0/0:39,0:39:99:0,111,8133	0/0:19,0:19:57.19:0,57,3176	0/0:42,0:42:99:0,123,9651	0/0:33,0:33:96.26:0,96,6768	0/0:43,0:43:99:0,114,9187	0/0:35,0:35:96.29:0,96,7079	0/0:24,0:24:72.23:0,72,5695	0/0:43,0:43:99:0,123,8978	0/0:20,0:20:57.20:0,57,4408	0/0:29,0:29:75.24:0,75,4187	0/0:40,0:40:99:0,108,7773	0/0:59,0:59:99:0,172,12827	0/0:36,0:36:87.10:0,87,6022	0/0:28,0:28:75.26:0,75,5921	0/0:43,0:43:99:0,129,10566	1/1:1,16:17:24.08:1143,24,0	0/0:50,0:50:99:0,141,9788	0/0:30,0:30:81.21:0,81,6274	0/0:18,0:18:54.19:0,54,4370
chr10	84881097	.	G	GA	9129.61	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.964;DP=741;FS=0.000;HRun=3;HaplotypeScore=192.2975;InbreedingCoeff=0.9996;MQ=91.37;MQ0=0;MQRankSum=-6.936;QD=13.53;ReadPosRankSum=5.323;VQSLOD=3.7401;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:46,0:46:99:505,102,0	1/1:14,0:14:37.65:189,38,0	0/0:39,2:41:48.53:0,49,803	0/0:25,0:25:31.97:0,32,517	1/1:28,2:30:60.97:415,61,0	1/1:18,0:18:36.71:180,37,0	1/1:20,0:20:54.03:267,54,0	1/1:31,0:31:84.92:573,85,0	1/1:34,0:34:85.72:447,86,0	1/1:31,0:31:88.09:586,88,0	1/1:19,0:19:50.69:266,51,0	1/1:21,0:21:40.94:237,41,0	1/1:26,0:26:53.27:284,53,0	1/1:26,0:26:59.11:336,59,0	1/1:26,0:26:73.46:407,73,0	1/1:26,0:26:71.16:411,71,0	1/1:30,1:31:73.07:397,73,0	1/1:22,0:22:52.96:239,53,0	1/1:17,0:17:39.94:244,40,0	1/1:24,0:24:50.24:263,50,0	1/1:27,0:27:68.97:325,69,0	1/1:24,0:24:45.52:294,46,0	1/1:28,0:28:73.64:374,74,0	1/1:33,0:33:79.75:395,80,0	1/1:20,0:20:55.35:299,55,0	1/1:43,0:43:99:752,120,0	1/1:22,0:22:45.13:247,45,0	1/1:16,0:16:41.47:197,41,0
chr10	84881205	.	T	TG	21247.52	PASS	AB=0.700;AC=53;AF=0.946;AN=56;BaseQRankSum=-1.380;DP=566;FS=2.022;HRun=1;HaplotypeScore=190.3899;InbreedingCoeff=0.5808;MQ=61.68;MQ0=0;MQRankSum=-2.839;QD=38.01;ReadPosRankSum=2.370;VQSLOD=4.4603;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:69.17:1005,69,0	1/1:0,9:10:24.08:358,24,0	0/1:4,3:7:4.57:183,0,5	0/0:7,0:6:5.04:0,5,36	1/1:2,28:30:72.04:996,72,0	1/1:1,27:27:78.20:1132,78,0	1/1:1,18:19:51.09:713,51,0	1/1:1,16:17:48.16:713,48,0	1/1:2,27:29:75.25:1122,75,0	1/1:1,26:26:72.21:1036,72,0	1/1:0,18:18:48.12:692,48,0	1/1:0,23:23:66.22:987,66,0	1/1:1,19:20:60.16:872,60,0	1/1:1,17:18:48.16:717,48,0	1/1:0,21:21:60.20:894,60,0	1/1:2,20:21:57.15:826,57,0	1/1:0,20:20:45.15:672,45,0	1/1:1,16:17:51.17:760,51,0	1/1:2,14:16:42.22:652,42,0	1/1:1,31:32:90.11:1258,90,0	1/1:1,10:11:15.05:224,15,0	1/1:1,20:20:47.99:661,48,0	1/1:0,21:21:60.20:883,60,0	1/1:1,10:11:26.92:347,27,0	1/1:1,27:28:72.24:1076,72,0	1/1:2,25:26:69.23:1029,69,0	1/1:0,26:26:66.02:900,66,0	1/1:0,13:13:36.12:538,36,0
chr10	84881322	.	A	ACAAAAC	6427.57	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-4.222;DP=659;FS=5.255;HRun=0;HaplotypeScore=139.4618;InbreedingCoeff=0.9917;MQ=61.78;MQ0=6;MQRankSum=-6.961;QD=39.92;ReadPosRankSum=-1.425;VQSLOD=4.4239;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,23:32:24.08:773,24,0	0/0:15,0:14:36.11:0,36,681	0/0:33,0:26:42.13:0,42,634	0/0:34,0:24:28.42:0,28,440	0/0:37,0:37:84.25:0,84,1673	0/0:35,0:35:90.24:0,90,1771	0/0:17,0:17:36.11:0,36,672	1/1:13,0:18:27.09:501,27,0	0/0:21,0:21:60.16:0,60,1123	0/0:25,0:25:45.15:0,45,906	0/0:26,0:26:54.18:0,54,973	0/0:16,0:16:42.03:0,42,706	0/0:14,0:14:27.09:0,27,552	0/0:23,0:23:57.17:0,57,990	0/0:18,0:18:48.05:0,48,783	0/0:20,0:20:39.09:0,39,704	0/0:28,0:28:69.12:0,69,1225	0/0:20,0:20:50.44:0,50,1085	1/1:12,0:13:18.01:260,18,0	1/1:10,34:44:99:2580,99,0	1/1:8,0:11:11.94:130,12,0	1/1:9,5:15:32.94:644,33,0	0/0:25,0:25:57.10:0,57,984	0/0:26,0:26:58.98:0,59,1047	0/0:22,0:22:32.25:0,32,661	0/0:28,0:27:66.18:0,66,1316	1/1:12,12:24:60.03:1539,60,0	0/0:13,0:13:36.12:0,36,719
chr10	84881387	.	GAGAGGCAGGAGGC	G	3023.11	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.713;DP=494;FS=24.203;HRun=0;HaplotypeScore=180.9130;InbreedingCoeff=0.9313;MQ=66.20;MQ0=0;MQRankSum=-5.700;QD=35.15;ReadPosRankSum=-0.224;VQSLOD=1.6386;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:54.14:0,54,3015	0/0:7,0:7:18.06:0,18,1122	0/0:17,0:16:39.13:0,39,2136	0/0:11,0:11:19.62:0,20,886	0/0:22,0:22:54.19:0,54,2787	0/0:19,0:19:27.08:0,27,1314	0/0:21,0:21:54.19:0,54,3291	1/1:13,11:24:24.07:538,24,0	0/0:22,0:22:57.17:0,57,3046	0/0:26,0:26:57.13:0,57,2894	0/0:16,0:16:30.10:0,30,1681	0/0:16,0:16:39.13:0,39,2325	0/0:14,0:14:36.12:0,36,2176	0/0:17,0:17:45.15:0,45,2475	0/0:25,0:25:60.19:0,60,3417	0/0:19,0:19:42.14:0,42,2565	0/0:25,0:25:69.21:0,69,4000	0/0:16,0:16:36.12:0,36,2056	1/1:4,4:8:5.99:137,6,0	1/1:9,6:15:18.06:688,18,0	1/1:8,2:9:3.01:115,3,0	1/1:4,12:16:21.07:803,21,0	0/0:21,0:21:36.12:0,36,1666	0/0:20,0:20:48.16:0,48,2737	0/0:17,0:17:27.09:0,27,1702	0/0:19,0:19:42.10:0,42,2052	1/1:3,10:13:24.08:918,24,0	0/0:8,0:8:15.05:0,15,963
chr10	84881593	.	CCACATGGTGGTT	C	12252.97	PASS	AB=0.746;AC=28;AF=0.538;AN=52;BaseQRankSum=14.447;DP=437;FS=2.512;HRun=0;HaplotypeScore=153.5110;InbreedingCoeff=0.7796;MQ=47.19;MQ0=17;MQRankSum=-13.471;QD=55.44;ReadPosRankSum=-0.220;VQSLOD=4.3346;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:18:36.12:1342,36,0	1/1:1,2:2:3.01:112,3,0	./.	./.	0/0:17,0:16:45.11:0,45,2592	0/0:22,0:22:57.08:0,57,3394	1/1:4,13:16:18.06:671,18,0	1/1:7,11:13:33.07:1066,33,0	0/0:32,0:32:93.32:0,93,5457	1/1:4,19:22:50.79:1776,51,0	1/1:1,5:6:3.01:112,3,0	0/0:18,0:18:54.19:0,54,3284	0/0:14,0:14:42.14:0,42,2576	0/0:15,0:15:45.15:0,45,2721	0/0:20,0:20:54.19:0,54,3012	1/1:5,20:24:60.21:2237,60,0	0/1:2,13:16:99:793,0,112	0/0:26,0:25:63.22:0,63,3810	1/1:4,13:13:27.09:909,27,0	1/1:1,12:12:20.74:729,21,0	1/1:7,6:10:9.50:337,10,0	1/1:1,7:7:15.05:559,15,0	0/0:8,0:6:18.06:0,18,1102	0/0:27,0:27:81.28:0,81,4828	1/1:0,10:8:24.08:895,24,0	0/1:22,1:23:45.65:46,0,3793	1/1:1,8:8:18.06:671,18,0	0/0:17,0:16:48.16:0,48,2769
chr10	84882282	.	A	AG	3607.64	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=0.624;DP=562;FS=0.885;HRun=5;HaplotypeScore=60.2643;InbreedingCoeff=0.9936;MQ=74.95;MQ0=0;MQRankSum=-0.980;QD=30.32;ReadPosRankSum=-1.491;VQSLOD=3.5113;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,153,1634	0/0:10,0:10:27.05:0,27,282	0/0:8,0:8:17.24:0,17,160	0/0:12,0:12:30.04:0,30,309	0/0:26,0:26:59.86:0,60,642	0/0:22,0:22:63.16:0,63,677	0/0:32,0:32:87.22:0,87,934	1/1:5,16:21:48.16:630,48,0	0/0:15,0:15:45.11:0,45,484	0/0:25,0:25:66.14:0,66,694	0/0:17,0:17:33.08:0,33,353	0/0:15,0:15:42.08:0,42,442	0/0:14,0:14:42.11:0,42,451	0/0:23,0:23:66.17:0,66,709	0/0:22,0:22:57.13:0,57,605	0/0:13,0:13:36.07:0,36,379	0/0:39,0:39:99:0,108,1149	0/0:16,0:16:42.10:0,42,451	1/1:9,9:18:33.09:413,33,0	1/1:3,11:14:30.10:394,30,0	1/1:1,32:33:84.27:1105,84,0	1/1:1,13:14:27.09:355,27,0	0/0:8,0:8:15.03:0,15,161	0/0:16,0:16:39.10:0,39,419	0/0:13,0:13:24.05:0,24,258	0/0:21,0:21:48.11:0,48,516	1/1:1,18:19:54.18:710,54,0	0/0:19,0:19:51.09:0,51,530
chr10	84882481	.	C	CGGCT	6932.13	PASS	AB=0.923;AC=15;AF=0.268;AN=56;BaseQRankSum=8.111;DP=439;FS=4.079;HRun=0;HaplotypeScore=77.0495;InbreedingCoeff=0.8921;MQ=78.27;MQ0=0;MQRankSum=-7.115;QD=59.25;ReadPosRankSum=1.097;VQSLOD=6.4348;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,2282	1/1:0,4:4:9.03:251,9,0	0/0:14,0:14:27.26:0,27,483	0/0:8,0:8:21.01:0,21,334	0/0:18,0:18:54.08:0,54,940	0/0:24,0:24:69.24:0,69,1355	1/1:5,12:18:48.16:1335,48,0	0/0:39,0:39:99:0,117,2223	0/0:7,0:7:18.05:0,18,315	1/1:2,13:17:45.10:1091,45,0	1/1:1,12:16:33.11:918,33,0	0/0:7,0:7:21.03:0,21,379	0/0:10,0:10:30.10:0,30,575	0/0:9,0:9:24.08:0,24,479	0/0:8,0:8:21.07:0,21,419	1/1:1,7:8:24.05:608,24,0	1/1:2,23:27:60.21:1677,60,0	0/0:29,0:29:81.28:0,81,1584	0/0:18,0:18:48.16:0,48,935	0/0:12,0:12:33.05:0,33,582	0/0:12,0:12:33.06:0,33,618	0/0:6,0:6:17.98:0,18,279	0/0:8,0:8:24.08:0,24,478	0/0:11,0:11:30.10:0,30,599	1/1:1,12:15:35.95:1005,36,0	0/1:11,1:12:47.61:48,0,549	0/0:18,0:18:54.14:0,54,1001	0/0:25,0:25:63.22:0,63,1224
chr10	84882599	.	CT	C	1250.97	PASS	AB=0.938;AC=14;AF=0.250;AN=56;BaseQRankSum=4.519;DP=412;FS=1.003;HRun=13;HaplotypeScore=48.3241;InbreedingCoeff=0.7232;MQ=64.15;MQ0=3;MQRankSum=0.411;QD=8.87;ReadPosRankSum=-1.204;VQSLOD=1.9477;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,3:30:13.60:0,14,614	0/0:5,0:5:10.82:0,11,86	0/0:16,1:6:3.53:0,4,33	0/1:23,0:14:4.85:5,0,82	0/0:13,0:13:29.98:0,30,276	0/0:13,1:15:32.89:0,33,306	0/0:7,0:7:15.02:0,15,143	1/1:11,26:36:68.38:497,68,0	0/0:8,0:8:12:0,12,105	0/0:16,0:16:42.53:0,43,406	0/1:11,2:14:7.93:8,0,238	0/0:7,0:7:8.86:0,9,82	0/0:7,0:7:18.03:0,18,174	0/0:8,0:8:18.03:0,18,174	0/0:5,0:5:12.02:0,12,117	0/0:5,0:5:15.02:0,15,146	0/0:24,0:24:54.05:0,54,512	0/0:28,2:30:12.55:0,13,597	1/1:4,20:25:26.42:315,26,0	1/1:2,8:10:23.86:175,24,0	1/1:4,8:12:20.86:153,21,0	1/1:0,3:3:5.96:44,6,0	0/0:6,0:6:3:0,3,29	0/0:8,0:8:23.81:0,24,194	0/0:17,1:19:22.49:0,22,401	0/0:15,0:15:30.05:0,30,292	1/1:1,12:16:35.94:236,36,0	0/0:24,1:25:40.77:0,41,523
chr10	84883488	.	AT	A	2261.16	PASS	AB=0.875;AC=11;AF=0.196;AN=56;BaseQRankSum=6.825;DP=383;FS=3.112;HRun=1;HaplotypeScore=42.5797;InbreedingCoeff=0.8589;MQ=66.85;MQ0=4;MQRankSum=1.025;QD=27.92;ReadPosRankSum=3.304;VQSLOD=3.5405;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.14:0,63,821	1/1:0,8:8:18.06:248,18,0	0/0:15,0:11:28.14:0,28,304	0/0:12,0:9:15.26:0,15,218	0/0:16,0:16:48.06:0,48,624	0/0:15,0:15:45.13:0,45,624	0/0:16,0:16:39.05:0,39,511	0/0:26,0:26:78.26:0,78,1100	0/0:10,0:10:30.07:0,30,389	1/1:0,13:13:39.12:527,39,0	1/1:0,11:11:32.85:365,33,0	0/0:12,0:12:36.11:0,36,496	0/0:4,0:4:9.03:0,9,129	0/0:11,0:11:33.10:0,33,453	0/0:8,0:8:21.07:0,21,300	1/1:0,6:6:15.05:207,15,0	1/1:0,29:29:78.21:1050,78,0	0/0:23,0:23:66.17:0,66,901	0/0:17,0:17:45.13:0,45,620	0/0:13,0:13:39.10:0,39,520	0/0:6,0:6:15.03:0,15,193	0/0:10,0:10:30.06:0,30,375	0/0:9,0:9:27.08:0,27,367	0/0:17,0:17:51.17:0,51,721	0/0:12,0:12:36.09:0,36,464	0/1:12,2:14:40.27:40,0,425	0/0:20,0:20:60.11:0,60,761	0/0:5,0:5:15.01:0,15,175
chr10	84884199	.	C	CATAAA	506.54	PASS	AB=0.970;AC=4;AF=0.077;AN=52;BaseQRankSum=1.886;DP=325;FS=19.779;HRun=0;HaplotypeScore=71.5236;InbreedingCoeff=0.1803;MQ=79.92;MQ0=2;MQRankSum=-0.966;QD=6.18;ReadPosRankSum=-3.127;VQSLOD=-0.4672;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,8:15:24.04:573,24,0	0/0:1,0:1:3.01:0,3,56	0/1:26,0:14:10.95:11,0,65	0/1:39,0:28:31.83:32,0,194	0/0:8,0:8:15.03:0,15,246	0/0:9,0:9:18.06:0,18,333	0/0:6,0:6:3.01:0,3,56	0/0:31,0:31:30.02:0,30,452	0/0:10,0:10:12.04:0,12,222	0/0:10,0:10:18.06:0,18,334	0/0:2,0:2:6.02:0,6,111	0/0:8,0:8:3.01:0,3,56	0/0:6,0:6:6.02:0,6,111	0/0:5,0:5:6.02:0,6,111	0/0:10,0:10:15.05:0,15,277	0/0:8,0:8:3.01:0,3,56	0/0:26,0:26:45.15:0,45,832	0/0:18,0:18:27.09:0,27,501	0/0:15,0:15:6.02:0,6,111	0/0:3,0:3:9.03:0,9,167	0/0:11,0:11:9.03:0,9,167	./.	./.	0/0:4,0:4:3.01:0,3,56	0/0:12,0:12:18.06:0,18,334	0/0:14,0:14:24.07:0,24,416	0/0:17,0:17:30.10:0,30,556	0/0:4,0:4:9.03:0,9,165
chr10	84884311	.	TGGGTGG	T	605.27	PASS	AB=0.943;AC=11;AF=0.239;AN=46;BaseQRankSum=-1.596;DP=193;FS=6.193;HRun=0;HaplotypeScore=51.6432;InbreedingCoeff=0.1256;MQ=58.16;MQ0=14;MQRankSum=-2.666;QD=6.11;ReadPosRankSum=-1.927;VQSLOD=0.5263;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:4.31:0,4,79	./.	0/0:19,0:3:8.43:0,8,63	0/1:40,0:9:3.38:3,0,60	0/0:1,0:1:3.01:0,3,55	0/0:4,0:4:9.02:0,9,125	./.	1/1:1,14:16:32.81:433,33,0	./.	1/1:3,0:1:2.22:7,2,0	./.	0/0:3,0:3:9.03:0,9,299	0/0:2,0:2:5.97:0,6,72	0/0:3,0:2:6.02:0,6,163	0/0:2,0:2:6.02:0,6,156	0/0:1,0:1:0.89:0,1,2	1/1:2,0:2:3.45:23,3,0	0/0:7,0:6:10.31:0,10,102	0/1:8,0:9:22.82:201,0,23	0/0:5,0:5:5.33:0,5,70	0/0:27,0:25:3.32:0,3,16	0/1:12,0:11:6.99:7,0,136	./.	0/0:4,0:4:9.03:0,9,158	0/1:4,0:3:22.87:23,0,49	0/0:2,0:1:3.01:0,3,110	0/1:10,0:13:34.38:34,0,331	0/0:2,0:2:6.02:0,6,88
chr10	84884337	.	GGTGTGTGTGTGTGTGTGT	G	1438.44	PASS	AB=0.900;AC=11;AF=0.212;AN=52;BaseQRankSum=4.749;DP=218;FS=21.208;HRun=0;HaplotypeScore=71.7178;InbreedingCoeff=0.3929;MQ=56.29;MQ0=9;MQRankSum=-2.580;QD=14.24;ReadPosRankSum=1.583;VQSLOD=-0.2872;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:11:3.40:0,3,227	0/1:1,0:1:0:0,0,0	0/1:33,0:5:6.04:6,0,98	0/0:45,0:13:20:0,20,430	0/0:2,0:2:6.02:0,6,329	0/0:8,0:9:24.08:0,24,1718	0/0:3,0:5:3.01:0,3,102	1/1:10,6:16:18.03:428,18,0	0/0:5,0:5:12.04:0,12,732	0/0:2,0:2:6.02:0,6,320	./.	0/0:2,0:2:6.02:0,6,182	0/0:3,0:3:9.03:0,9,634	0/0:2,0:2:6.02:0,6,517	0/0:4,0:4:11.07:0,11,593	0/0:1,0:1:3.01:0,3,125	0/0:5,0:4:4.37:0,4,125	./.	0/1:4,3:7:80.59:385,0,81	0/0:1,0:1:0:0,0,0	1/1:11,19:29:5.38:194,5,0	1/1:3,2:5:3.01:150,3,0	0/0:2,0:2:6.02:0,6,430	0/0:7,0:8:21.07:0,21,1350	0/0:2,0:2:3.01:0,3,191	0/0:3,0:3:6.02:0,6,217	1/1:5,4:9:9.03:410,9,0	0/0:5,0:4:12.04:0,12,585
chr10	84885317	.	G	GCATACATA	6003.33	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-0.977;DP=762;FS=0.000;HRun=0;HaplotypeScore=180.4703;InbreedingCoeff=0.9545;MQ=59.84;MQ0=2;MQRankSum=-8.385;QD=29.72;ReadPosRankSum=-1.814;VQSLOD=4.2709;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,105,2176	0/0:16,0:16:39.08:0,39,827	0/0:12,0:9:14.77:0,15,173	0/0:17,0:6:9.48:0,9,126	0/0:28,0:28:54.17:0,54,1256	0/0:28,0:28:60.21:0,60,1484	0/0:27,0:28:51.13:0,51,992	1/1:36,0:34:57.15:1029,57,0	0/0:32,0:32:72.21:0,72,1559	0/0:49,0:49:99:0,116,2569	0/0:14,0:14:36.11:0,36,772	0/0:26,0:26:69.22:0,69,1601	0/0:25,0:25:60.19:0,60,1454	0/0:27,0:27:60.21:0,60,1485	0/0:19,0:19:33.11:0,33,767	0/0:28,0:29:60.21:0,60,1496	0/0:32,0:32:81.22:0,81,1891	0/0:23,0:23:48.12:0,48,1094	1/1:11,5:19:26.99:496,27,0	1/1:4,25:34:48.15:1736,48,0	1/1:14,9:28:3.01:96,3,0	1/1:8,15:24:27.09:1007,27,0	0/0:20,0:20:48.15:0,48,1112	0/0:35,0:35:87.18:0,87,1673	1/1:5,0:36:60.82:496,61,0	0/0:30,0:30:72.23:0,72,1695	1/1:7,17:24:30.10:1144,30,0	0/0:26,0:26:72.23:0,72,1578
chr10	84885654	.	T	TG	4213.07	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=5.682;DP=506;FS=3.722;HRun=2;HaplotypeScore=59.9786;InbreedingCoeff=0.9206;MQ=62.02;MQ0=0;MQRankSum=0.843;QD=36.32;ReadPosRankSum=1.588;VQSLOD=5.4953;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:39.13:562,39,0	1/1:1,12:13:33.11:475,33,0	0/0:20,0:16:41.02:0,41,455	0/0:24,0:21:60.18:0,60,726	0/0:19,0:19:54.17:0,54,667	0/0:20,0:20:57.17:0,57,694	1/1:1,15:16:42.14:605,42,0	0/0:26,0:26:69.21:0,69,847	0/0:21,0:21:60.16:0,60,719	1/1:3,25:28:81.27:1146,81,0	1/1:2,3:5:3.01:43,3,0	0/0:20,0:20:54.17:0,54,669	0/0:17,0:17:48.15:0,48,595	0/0:21,0:21:63.19:0,63,769	0/0:19,0:19:57.15:0,57,671	1/1:1,10:11:27.09:389,27,0	1/1:0,24:24:69.23:994,69,0	0/0:24,0:24:66.21:0,66,818	0/0:16,0:16:36.55:0,37,471	0/0:13,0:13:30.09:0,30,371	0/0:15,0:15:38.01:0,38,430	0/0:13,0:13:36.10:0,36,433	0/0:4,0:4:9.03:0,9,111	0/0:21,0:21:60.17:0,60,729	0/0:20,0:20:54.09:0,54,633	0/0:15,1:16:1.92:0,2,476	0/0:23,0:23:69.22:0,69,855	0/0:17,0:17:48.15:0,48,595
chr10	84885906	.	C	CCA	5344.20	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-13.025;DP=672;FS=10.735;HRun=0;HaplotypeScore=80.9442;InbreedingCoeff=0.9789;MQ=66.65;MQ0=4;MQRankSum=-1.112;QD=34.93;ReadPosRankSum=-1.121;VQSLOD=6.3865;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,123,1516	0/0:2,0:2:6.02:0,6,77	0/0:37,0:24:48.15:0,48,597	0/0:31,0:27:58.01:0,58,683	0/0:28,0:28:78.25:0,78,1003	0/0:23,0:23:60.11:0,60,737	0/0:25,0:25:57.18:0,57,727	1/1:4,18:22:34.36:859,34,0	0/0:19,0:19:54.16:0,54,680	0/0:24,0:24:63.15:0,63,762	0/0:19,0:19:51.16:0,51,655	0/0:16,0:16:48.16:0,48,617	0/0:27,0:27:75.24:0,75,963	0/0:22,0:22:60.19:0,60,767	0/0:17,0:17:39.13:0,39,500	0/0:14,0:14:42.14:0,42,540	0/0:39,0:39:99:0,99,1274	0/0:23,0:23:54.07:0,54,655	1/1:9,17:26:54.14:824,54,0	1/1:3,22:25:63.21:1000,63,0	1/1:3,27:29:57.19:949,57,0	1/1:1,14:14:36.12:600,36,0	0/0:13,0:13:36.10:0,36,448	0/0:25,0:25:63.20:0,63,809	0/0:22,0:22:55.87:0,56,372	0/0:32,0:32:72.23:0,72,926	1/1:5,30:34:66.23:1113,66,0	0/0:13,0:13:39.13:0,39,502
chr10	84888608	.	C	CA	2633.02	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-4.635;DP=427;FS=8.832;HRun=9;HaplotypeScore=51.5038;InbreedingCoeff=0.8851;MQ=65.80;MQ0=17;MQRankSum=-1.287;QD=18.03;ReadPosRankSum=-2.032;VQSLOD=2.5256;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,22:29:72.02:771,72,0	0/0:8,0:7:3.13:0,3,115	0/1:20,0:7:2.09:2,0,82	0/0:20,0:8:9.25:0,9,50	0/0:20,0:20:47.36:0,47,399	0/0:16,0:16:44.97:0,45,386	0/0:7,0:7:21:0,21,182	1/1:9,18:27:41.60:590,42,0	0/0:9,0:8:18:0,18,156	0/0:17,0:18:40.97:0,41,337	0/0:13,0:13:29.87:0,30,248	0/0:9,0:8:23.98:0,24,206	0/0:5,0:6:14.03:0,14,110	0/0:7,0:7:11.97:0,12,99	0/0:13,0:13:35.96:0,36,305	0/0:7,0:7:11.99:0,12,101	0/0:39,0:40:93.88:0,94,769	0/0:25,0:22:44.67:0,45,362	1/1:4,13:15:35.93:379,36,0	1/1:3,11:14:27.07:299,27,0	1/1:0,5:4:12.03:133,12,0	1/1:0,6:6:18.05:199,18,0	0/0:5,0:6:14.80:0,15,117	0/0:16,0:14:26.99:0,27,234	1/1:2,9:11:18.05:199,18,0	0/0:18,0:17:47.98:0,48,414	1/1:8,7:12:24.06:263,24,0	0/0:23,0:23:56.97:0,57,494
chr10	84889089	.	GAC	G	1871.56	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=3.836;DP=599;FS=4.440;HRun=0;HaplotypeScore=109.8968;InbreedingCoeff=0.9519;MQ=70.99;MQ0=21;MQRankSum=1.698;QD=11.41;ReadPosRankSum=-2.172;VQSLOD=2.6964;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:87.27:0,87,1373	0/0:5,0:5:9:0,9,126	0/0:49,0:26:41.12:0,41,778	0/0:45,0:22:32.47:0,32,553	0/0:25,0:24:57.17:0,57,867	0/0:18,0:17:30.03:0,30,438	0/0:9,0:8:18.06:0,18,285	1/1:29,0:29:60.18:765,60,0	0/0:9,0:9:20.81:0,21,309	0/0:29,0:29:71.87:0,72,1240	0/0:16,0:16:36.12:0,36,569	0/0:18,0:18:45.05:0,45,674	0/0:10,0:10:29.99:0,30,428	0/0:8,0:8:18.06:0,18,293	0/0:10,0:10:23.82:0,24,352	0/0:10,0:9:18.06:0,18,292	0/0:23,0:23:63.19:0,63,941	0/0:13,0:12:36.01:0,36,535	1/1:23,1:24:54.15:681,54,0	1/1:30,2:32:18.02:203,18,0	1/1:28,0:26:6.01:59,6,0	1/1:28,3:31:18.04:208,18,0	0/0:20,0:20:48.15:0,48,750	0/0:24,0:24:53.99:0,54,734	0/0:18,0:18:26.95:0,27,323	0/0:25,0:24:58.88:0,59,837	1/1:18,2:20:14.21:136,14,0	0/0:10,0:7:21.07:0,21,322
chr10	84889095	.	CACGA	C	2124.54	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=3.740;DP=584;FS=6.068;HRun=0;HaplotypeScore=123.3834;InbreedingCoeff=0.8950;MQ=67.19;MQ0=21;MQRankSum=2.856;QD=13.62;ReadPosRankSum=-1.962;VQSLOD=2.4764;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:96.32:0,96,1821	0/1:3,0:3:3.33:3,0,110	0/0:42,0:20:41.12:0,41,778	0/0:44,0:21:32.66:0,33,554	0/0:24,0:23:60.18:0,60,976	0/0:17,0:16:28.50:0,28,350	0/0:10,0:9:18.06:0,18,313	1/1:2,0:24:60.18:765,60,0	0/0:10,0:10:21.03:0,21,375	0/0:30,0:30:86.63:0,87,1162	0/0:15,0:15:36.08:0,36,475	0/0:17,0:17:45.11:0,45,814	0/0:11,0:11:20.42:0,20,424	0/0:7,0:7:18.06:0,18,383	0/0:10,0:10:24.04:0,24,432	0/0:10,0:9:21.05:0,21,270	0/0:23,0:23:66.17:0,66,1026	0/0:15,0:14:39.09:0,39,643	1/1:19,0:19:54.10:687,54,0	1/1:4,0:30:21.06:268,21,0	1/1:2,28:29:6.02:125,6,0	1/1:3,28:31:18.02:233,18,0	0/0:19,0:19:48.10:0,48,708	0/0:24,0:24:21.27:0,21,526	0/0:16,0:16:23.75:0,24,267	0/0:25,0:24:61.99:0,62,868	1/1:2,17:19:14.70:225,15,0	0/0:10,0:7:21.07:0,21,329
chr10	84889293	.	CA	C	808.64	PASS	AB=0.896;AC=19;AF=0.339;AN=56;BaseQRankSum=6.426;DP=548;FS=1.478;HRun=15;HaplotypeScore=72.7146;InbreedingCoeff=0.3729;MQ=67.34;MQ0=3;MQRankSum=0.733;QD=3.34;ReadPosRankSum=3.573;VQSLOD=0.1169;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:29:12.72:0,13,59	0/0:1,0:6:11.46:0,11,62	0/1:14,2:14:23.87:24,0,84	0/1:11,0:9:7.81:8,0,26	0/0:18,3:22:12.43:0,12,348	0/1:18,1:26:5.47:5,0,250	0/1:14,2:17:12.58:13,0,172	1/1:11,11:25:9.23:163,9,0	0/0:16,3:20:6.12:0,6,262	0/0:13,0:30:52.25:0,52,315	0/0:7,0:18:40.68:0,41,255	0/1:23,4:28:13.95:14,0,321	0/1:13,2:15:20.63:21,0,77	0/0:12,0:12:0.11:0,0,104	0/0:18,2:20:32.98:0,33,285	0/0:9,0:26:28.90:0,29,173	0/0:7,0:16:17.48:0,17,114	0/1:8,1:9:1.27:1,0,114	1/1:12,6:20:29.62:168,30,0	1/1:6,11:21:19.71:100,20,0	1/1:7,2:11:4.91:25,5,0	1/1:6,13:21:33.50:204,33,0	0/0:17,1:22:24.70:0,25,347	0/0:21,1:24:27.59:0,28,361	0/0:19,4:23:9.28:0,9,302	0/0:23,3:27:6.69:0,7,273	1/1:5,14:19:17.95:242,18,0	0/0:10,1:11:4.73:0,5,165
chr10	84889508	.	TG	T	4024.32	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.005;DP=541;FS=1.159;HRun=9;HaplotypeScore=60.9350;InbreedingCoeff=0.9699;MQ=70.86;MQ0=1;MQRankSum=-0.465;QD=23.13;ReadPosRankSum=0.789;VQSLOD=4.4729;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,38:41:99:961,105,0	0/0:5,0:5:12.02:0,12,129	0/0:20,0:17:27.04:0,27,284	0/0:17,0:15:17.20:0,17,307	0/0:25,0:25:72.21:0,72,830	0/0:20,0:21:63:0,63,695	0/0:7,0:19:31.25:0,31,159	1/1:5,23:28:65.99:593,66,0	0/0:18,0:18:51.14:0,51,580	0/0:25,0:25:54.16:0,54,622	0/0:12,0:12:27.07:0,27,302	0/0:20,0:20:54.11:0,54,598	0/0:18,0:18:48.13:0,48,545	0/0:10,0:10:27.08:0,27,312	0/0:24,0:25:60.01:0,60,672	0/0:16,0:16:48.14:0,48,553	0/0:17,1:18:16.81:0,17,477	0/0:20,0:20:54.16:0,54,623	1/1:3,20:23:56.97:505,57,0	1/1:1,23:24:59.92:537,60,0	1/1:2,19:21:57.03:522,57,0	1/1:0,16:16:42.02:384,42,0	0/0:7,0:7:18.05:0,18,207	0/0:31,0:31:87.26:0,87,1004	0/0:5,0:20:42.70:0,43,256	0/0:17,0:17:48.14:0,48,554	1/1:2,19:21:57.03:522,57,0	0/0:3,0:3:6.02:0,6,69
chr10	84889847	.	CTCTA	C	2722.98	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.199;DP=477;FS=0.000;HRun=0;HaplotypeScore=92.5779;InbreedingCoeff=0.9725;MQ=80.73;MQ0=0;MQRankSum=-0.905;QD=31.30;ReadPosRankSum=1.280;VQSLOD=3.5268;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:72.23:0,72,1723	1/1:0,6:6:15.05:263,15,0	0/0:21,0:17:25.46:0,25,482	0/0:29,0:25:25.13:0,25,636	0/0:30,0:30:84.29:0,84,2121	0/0:20,0:20:51.14:0,51,1133	1/1:0,14:14:18.06:318,18,0	0/0:37,0:37:99:0,99,2075	0/0:7,0:7:21.07:0,21,539	1/1:2,23:25:66.21:1114,66,0	1/1:3,13:16:27.09:477,27,0	0/0:12,0:12:36.10:0,36,788	0/0:8,0:8:24.08:0,24,615	0/0:13,0:13:36.11:0,36,870	0/0:15,0:15:45.15:0,45,1124	1/1:1,11:12:27.09:472,27,0	1/1:1,13:14:15.05:265,15,0	0/0:11,0:11:30.10:0,30,735	0/0:17,0:17:41.63:0,42,903	0/0:20,0:20:54.19:0,54,1384	0/0:9,0:9:27.09:0,27,691	0/0:5,0:5:15.05:0,15,372	0/0:5,0:5:12.04:0,12,285	0/0:5,0:5:12.04:0,12,308	0/0:21,0:21:51.17:0,51,1234	0/0:23,1:24:19.24:0,19,1616	0/0:25,0:24:72.25:0,72,1775	0/0:22,0:22:59.82:0,60,1334
chr10	84889907	.	CTATT	C	3709.55	PASS	AB=0.926;AC=22;AF=0.393;AN=56;BaseQRankSum=6.548;DP=550;FS=7.751;HRun=0;HaplotypeScore=122.2051;InbreedingCoeff=0.4470;MQ=54.83;MQ0=18;MQRankSum=-2.870;QD=11.17;ReadPosRankSum=-0.446;VQSLOD=2.6517;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:33.75:0,34,703	0/1:13,0:12:64.01:130,0,64	0/1:21,0:5:5.73:6,0,40	0/1:17,0:5:6.62:7,0,84	0/1:22,7:29:17.76:18,0,425	0/0:13,5:18:18.05:0,18,352	0/0:12,0:11:13.56:0,14,113	1/1:50,0:42:96.55:865,97,0	0/0:11,0:11:33.06:0,33,559	1/1:24,4:28:28.62:676,29,0	0/1:15,5:20:9.95:192,0,10	0/0:18,0:18:54.09:0,54,780	0/0:14,0:14:42.08:0,42,764	0/0:17,0:17:30.78:0,31,293	0/0:19,0:19:57.11:0,57,826	0/1:15,5:20:8.53:280,0,9	1/1:15,0:15:29.98:368,30,0	0/0:16,0:16:38.44:0,38,393	1/1:15,0:13:15.23:240,15,0	1/1:26,0:26:12.42:244,12,0	1/1:11,0:11:14.50:124,14,0	0/1:13,0:13:6.64:107,0,7	0/0:13,0:13:34.63:0,35,662	0/0:6,0:6:18.03:0,18,269	0/0:25,0:24:44.95:0,45,380	0/1:27,0:27:17.43:17,0,641	1/1:27,0:27:57.14:434,57,0	0/0:21,0:20:44.98:0,45,470
chr10	84889911	.	T	TTATC	1821.04	PASS	AB=1.000;AC=29;AF=0.604;AN=48;BaseQRankSum=0.668;DP=552;FS=12.174;HRun=0;HaplotypeScore=131.2214;InbreedingCoeff=0.6501;MQ=54.64;MQ0=18;MQRankSum=0.899;QD=5.57;ReadPosRankSum=0.073;VQSLOD=1.2715;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:19.79:0,20,220	0/0:13,0:12:3:0,3,31	./.	./.	1/1:28,0:28:17.39:253,17,0	1/1:18,0:18:6.02:84,6,0	./.	./.	0/0:13,0:13:18.04:0,18,244	1/1:30,0:30:6.37:88,6,0	1/1:20,0:20:7.40:38,7,0	0/0:18,0:18:15.05:0,15,223	0/0:16,0:16:27.06:0,27,363	1/1:8,8:16:6.02:137,6,0	0/0:21,0:21:24.06:0,24,313	0/1:20,0:20:6.01:6,0,24	1/1:16,0:16:10.59:65,11,0	1/1:11,6:17:9.03:206,9,0	1/1:15,0:13:3.89:29,4,0	1/1:26,0:26:5.97:50,6,0	1/1:11,0:11:5.77:51,6,0	0/1:13,0:13:0.01:0,0,0	0/0:13,0:13:18.06:0,18,268	0/0:7,0:7:6.02:0,6,89	0/1:15,0:24:0:0,0,0	1/1:12,13:25:34.36:740,34,0	1/1:26,0:26:4.21:35,4,0	1/1:13,8:20:9.03:206,9,0
chr10	84890241	.	CTCT	C	5395.13	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=6.804;DP=730;FS=0.000;HRun=0;HaplotypeScore=160.0438;InbreedingCoeff=0.7916;MQ=57.79;MQ0=8;MQRankSum=-4.106;QD=28.55;ReadPosRankSum=-2.851;VQSLOD=4.3246;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,123,1605	0/1:9,0:8:26.42:26,0,130	0/0:33,0:10:7.11:0,7,392	0/0:38,0:17:26.15:0,26,537	0/0:18,0:16:48.16:0,48,1082	0/0:30,0:30:90.25:0,90,1959	0/0:38,0:38:21.97:0,22,994	1/1:3,9:10:24.05:377,24,0	0/0:21,0:21:63.18:0,63,1298	0/1:28,0:28:99:141,0,524	0/0:16,0:16:38.80:0,39,410	0/0:31,0:31:93.31:0,93,2091	0/0:27,0:27:78.27:0,78,1752	0/0:18,0:18:51.16:0,51,1083	0/0:34,0:34:99:0,99,2142	0/0:17,0:17:22.64:0,23,527	0/0:28,0:28:49.09:0,49,846	0/0:24,0:24:62.56:0,63,1380	1/1:1,23:23:59.72:978,60,0	1/1:0,29:28:72.03:1048,72,0	1/1:6,40:47:79.64:1275,80,0	1/1:1,24:25:57.19:939,57,0	0/0:27,0:27:81.28:0,81,1848	0/0:29,0:29:77.65:0,78,1605	0/0:15,0:15:15.04:0,15,441	0/0:23,0:23:66.22:0,66,1398	1/1:0,15:15:35.78:611,36,0	0/0:19,0:19:54.19:0,54,1242
chr10	84890674	.	A	AG	37.54	PASS	AB=0.897;AC=5;AF=0.089;AN=56;BaseQRankSum=3.434;DP=455;FS=0.000;HRun=0;HaplotypeScore=63.4205;InbreedingCoeff=0.3328;MQ=45.81;MQ0=28;MQRankSum=-1.259;QD=0.87;ReadPosRankSum=-0.605;VQSLOD=0.7060;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:19:38.67:0,39,288	0/0:3,0:2:0:0,0,0	0/0:42,0:6:8.99:0,9,85	0/0:32,0:4:10.64:0,11,54	0/0:20,0:19:46.13:0,46,454	0/0:10,0:10:17.95:0,18,146	0/0:10,0:8:2.90:0,3,16	0/0:21,0:19:41.93:0,42,265	0/0:13,0:13:29.96:0,30,269	0/1:12,1:11:16.52:17,0,65	0/1:10,1:10:4.33:29,0,4	0/0:20,0:20:50.89:0,51,430	0/0:10,0:10:29.94:0,30,253	0/0:13,0:13:35.88:0,36,307	0/0:13,0:12:29.91:0,30,251	1/1:8,0:7:5.57:55,6,0	0/1:9,2:11:17.71:49,0,18	0/0:12,0:12:25.30:0,25,262	0/0:14,0:13:31.71:0,32,218	0/0:23,0:22:55.80:0,56,370	0/0:13,0:13:32.28:0,32,234	0/0:14,0:12:29.81:0,30,228	0/0:19,0:19:54.03:0,54,570	0/0:22,0:22:56.05:0,56,549	0/0:19,0:19:21.36:0,21,184	0/0:24,0:21:50:0,50,496	0/0:17,0:17:46.34:0,46,326	0/0:4,0:2:6.02:0,6,83
chr10	84890675	.	AAAAAAGAG	A	620.11	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=3.584;DP=460;FS=13.778;HRun=0;HaplotypeScore=101.9796;InbreedingCoeff=0.2364;MQ=45.88;MQ0=30;MQRankSum=-1.920;QD=4.00;ReadPosRankSum=-0.690;VQSLOD=1.1980;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:20:3.05:3,0,465	0/0:4,0:3:3.01:0,3,50	0/0:43,0:6:7.38:0,7,209	0/1:32,0:4:1.66:2,0,146	0/0:20,0:19:49.95:0,50,1275	0/0:10,0:10:21.07:0,21,545	1/1:9,0:7:2.93:23,3,0	0/0:21,0:19:5.24:0,5,408	0/0:13,0:13:30.10:0,30,837	0/1:12,0:11:99:114,0,159	0/1:9,0:9:19.07:19,0,140	0/0:20,0:20:48.10:0,48,1159	0/0:10,0:10:30.10:0,30,833	0/0:13,0:13:33.07:0,33,782	0/0:15,0:14:36.12:0,36,1005	1/1:9,0:7:7.07:76,7,0	0/1:9,0:11:32.30:32,0,276	0/0:13,0:13:33.11:0,33,802	0/1:14,0:13:51.36:51,0,348	0/0:22,0:21:56.29:0,56,660	0/1:13,0:13:0.59:1,0,443	0/0:13,0:11:24.77:0,25,373	0/0:19,0:19:54.18:0,54,1510	0/0:22,0:22:57.19:0,57,1738	1/1:2,17:19:17.91:446,18,0	0/0:26,0:23:69.22:0,69,1750	0/0:17,0:17:10.16:0,10,584	0/0:4,0:2:6.02:0,6,255
chr10	84890680	.	AGAGAG	A	1922.12	PASS	AB=0.980;AC=15;AF=0.268;AN=56;BaseQRankSum=4.172;DP=478;FS=2.606;HRun=0;HaplotypeScore=86.0696;InbreedingCoeff=0.7700;MQ=50.55;MQ0=34;MQRankSum=-2.365;QD=12.09;ReadPosRankSum=-3.997;VQSLOD=0.8449;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:15:18.72:0,19,431	0/0:5,0:4:2.98:0,3,72	0/1:49,0:8:24.96:25,0,161	0/0:33,0:7:5.93:0,6,118	0/0:14,0:15:10.80:0,11,652	0/0:11,0:11:24.08:0,24,559	0/0:12,0:9:2.35:0,2,8	1/1:13,2:16:26.14:336,26,0	0/0:11,0:11:26.86:0,27,645	0/0:26,0:23:62.16:0,62,1122	0/0:14,0:13:8.91:0,9,164	0/0:16,0:16:33:0,33,849	0/0:8,0:8:17.88:0,18,453	0/0:12,0:12:14.63:0,15,381	0/0:14,0:13:26.12:0,26,686	0/0:16,0:13:2.92:0,3,72	0/0:21,0:20:32.24:0,32,654	0/0:14,0:14:22.31:0,22,532	1/1:4,7:11:22.81:325,23,0	1/1:15,0:19:40.06:471,40,0	1/1:12,0:13:28.48:266,28,0	1/1:9,0:9:7.49:226,7,0	0/0:18,0:18:44.37:0,44,1119	0/0:20,0:20:43.92:0,44,1057	1/1:19,0:19:21.42:173,21,0	0/0:24,0:22:63.13:0,63,1626	1/1:15,1:16:21.01:290,21,0	0/0:7,0:5:15.05:0,15,387
chr10	84894061	.	CT	C	2164.98	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.867;DP=357;FS=1.005;HRun=6;HaplotypeScore=40.7804;InbreedingCoeff=0.9038;MQ=60.07;MQ0=3;MQRankSum=-1.242;QD=25.47;ReadPosRankSum=-1.143;VQSLOD=2.8276;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:71.23:0,71,919	0/0:6,0:6:18.06:0,18,235	0/0:3,0:2:3.01:0,3,35	0/0:7,0:3:8.38:0,8,76	0/0:17,0:17:51.16:0,51,664	0/0:18,0:18:51.17:0,51,671	0/0:8,0:8:24.05:0,24,285	1/1:1,23:24:69.06:694,69,0	0/0:5,0:5:15.04:0,15,185	0/0:18,0:18:51.14:0,51,654	0/0:11,0:11:33.08:0,33,416	0/0:7,0:7:18.06:0,18,236	0/0:8,0:8:24.08:0,24,316	0/0:7,0:7:21.06:0,21,264	0/0:7,0:7:21.06:0,21,261	0/0:3,0:3:6.02:0,6,79	0/0:28,0:28:72.17:0,72,896	0/0:27,0:27:75.18:0,75,965	1/1:3,17:19:51.07:526,51,0	1/1:1,14:15:36.09:387,36,0	1/1:0,5:5:12.03:129,12,0	1/1:1,4:5:12.03:129,12,0	0/0:7,0:7:21.07:0,21,276	0/0:4,0:4:12.04:0,12,158	0/0:26,0:26:72.22:0,72,933	0/0:18,0:18:51.15:0,51,644	1/1:0,16:16:45.11:483,45,0	0/0:9,0:9:18.03:0,18,208
chr10	84894085	.	CATAA	C	964.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.109;DP=379;FS=0.000;HRun=0;HaplotypeScore=72.8386;InbreedingCoeff=0.8155;MQ=66.19;MQ0=0;MQRankSum=-1.813;QD=43.86;ReadPosRankSum=2.132;VQSLOD=3.6757;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:60.21:1060,60,0	0/0:7,0:7:15.05:0,15,349	0/0:4,0:3:9.03:0,9,212	0/0:8,0:7:10.97:0,11,92	0/0:16,0:16:48.14:0,48,1130	0/0:20,0:20:54.15:0,54,1193	0/0:10,0:10:30.10:0,30,735	0/0:23,0:23:60.19:0,60,1386	0/0:4,0:4:12.04:0,12,294	0/0:20,0:20:48.16:0,48,1211	0/0:19,0:19:54.17:0,54,1275	0/0:8,0:8:24.08:0,24,599	0/0:8,0:8:18.06:0,18,457	0/0:9,0:9:27.09:0,27,686	0/0:7,0:7:18.06:0,18,447	0/0:7,0:7:21.07:0,21,533	0/0:19,0:19:45.15:0,45,1087	0/0:24,0:24:66.20:0,66,1599	0/0:23,0:23:57.19:0,57,1352	0/0:20,0:20:57.18:0,57,1257	0/0:7,0:7:18.06:0,18,429	0/0:4,0:4:12.04:0,12,305	0/0:12,0:12:33.09:0,33,750	0/0:5,0:5:15.05:0,15,380	0/0:27,0:27:75.26:0,75,1885	0/0:19,0:19:57.19:0,57,1382	0/0:18,0:17:45.15:0,45,1106	0/0:9,0:9:24.08:0,24,609
chr10	84894731	.	A	AAAG	950.99	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-5.591;DP=582;FS=3.292;HRun=0;HaplotypeScore=110.7585;InbreedingCoeff=0.8240;MQ=58.79;MQ0=9;MQRankSum=2.230;QD=7.86;ReadPosRankSum=-0.995;VQSLOD=2.7034;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:52:54.81:0,55,447	0/0:13,0:13:26.90:0,27,215	0/0:19,0:11:29.83:0,30,266	0/0:9,0:4:0.41:0,0,67	0/0:21,0:21:29.68:0,30,253	0/0:21,0:21:41.80:0,42,356	0/0:25,0:24:51.98:0,52,448	1/1:22,0:23:38.87:329,39,0	0/0:15,0:15:23.22:0,23,197	0/0:18,0:18:30.01:0,30,271	0/0:21,0:19:24:0,24,211	0/0:7,0:7:9:0,9,79	0/0:18,0:17:28.44:0,28,222	0/0:17,0:15:17.99:0,18,158	0/0:20,0:19:29.36:0,29,244	0/0:10,0:10:18:0,18,159	0/0:26,0:25:23.87:0,24,187	0/0:35,0:34:55.23:0,55,421	1/1:10,16:26:44.86:456,45,0	1/1:12,0:17:8.90:90,9,0	1/1:3,0:8:3.01:42,3,0	1/1:5,1:16:14.85:155,15,0	0/0:21,0:20:35.73:0,36,338	0/0:34,0:33:59.96:0,60,516	0/0:26,0:25:44.97:0,45,399	0/0:24,0:22:35.95:0,36,307	1/1:15,13:26:2.97:47,3,0	0/0:7,0:6:5.81:0,6,53
chr10	84895346	.	A	AGAGG	1624.61	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=3.486;DP=531;FS=15.727;HRun=0;HaplotypeScore=101.7628;InbreedingCoeff=0.9361;MQ=66.70;MQ0=6;MQRankSum=-5.872;QD=21.10;ReadPosRankSum=-2.454;VQSLOD=1.9958;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:81.02:0,81,1288	0/0:3,0:3:6.02:0,6,101	0/0:47,0:30:44.95:0,45,589	0/0:53,0:31:39.11:0,39,514	0/0:19,0:19:42.13:0,42,686	0/0:19,0:19:39.13:0,39,645	0/0:39,0:39:90.24:0,90,1433	1/1:18,0:18:23.98:350,24,0	0/0:18,0:18:48.16:0,48,812	0/0:20,0:20:41.80:0,42,645	0/0:14,0:14:30.03:0,30,448	0/0:14,0:14:30.09:0,30,483	0/0:12,0:12:33.09:0,33,519	0/0:12,0:12:30.10:0,30,509	0/0:7,0:7:18.06:0,18,303	0/0:11,0:11:11.92:0,12,203	0/0:29,0:29:39.11:0,39,625	0/0:14,0:14:33.07:0,33,529	1/1:8,5:13:18.05:354,18,0	1/1:5,5:10:11.97:239,12,0	1/1:6,15:21:21.03:411,21,0	1/1:4,2:6:5.97:76,6,0	0/0:14,0:14:36.11:0,36,585	0/0:22,0:22:45.15:0,45,764	0/0:20,0:19:45.14:0,45,734	0/0:23,0:23:51.17:0,51,865	1/1:0,8:9:15.05:374,15,0	0/0:10,0:10:30.09:0,30,468
chr10	84895383	.	G	GGGA	296.15	PASS	AB=0.946;AC=7;AF=0.125;AN=56;BaseQRankSum=4.524;DP=531;FS=5.668;HRun=0;HaplotypeScore=99.3834;InbreedingCoeff=0.0924;MQ=59.36;MQ0=17;MQRankSum=-5.362;QD=5.59;ReadPosRankSum=-2.555;VQSLOD=1.4894;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:54.07:0,54,856	0/0:2,0:2:6.02:0,6,102	0/0:74,0:23:43.11:0,43,597	0/0:101,0:28:41.96:0,42,518	0/0:16,0:16:45.15:0,45,767	0/0:15,0:15:43:0,43,638	0/0:32,0:32:90.25:0,90,1477	0/1:16,0:15:99:135,0,141	0/0:15,0:15:42.14:0,42,698	0/0:16,0:16:42.11:0,42,656	0/0:11,0:11:7.60:0,8,151	0/0:14,0:14:27.09:0,27,461	0/0:8,0:8:21.05:0,21,286	0/0:14,0:14:36.10:0,36,548	0/0:8,0:8:24.08:0,24,399	0/0:14,0:14:14.95:0,15,255	0/0:18,0:18:18.02:0,18,228	0/0:14,0:14:39.06:0,39,579	0/1:3,0:3:22.81:48,0,23	0/1:5,1:6:16.32:16,0,36	0/1:12,2:13:34.30:34,0,122	1/1:6,3:9:5.61:152,6,0	0/0:11,0:11:27.08:0,27,433	0/0:18,0:18:50.95:0,51,822	0/0:18,0:18:4.86:0,5,662	0/0:17,0:17:39.12:0,39,609	0/1:5,0:5:38.66:39,0,50	0/0:15,0:14:30.10:0,30,510
chr10	84895398	.	GGGGA	G	1651.59	PASS	AB=0.882;AC=15;AF=0.268;AN=56;BaseQRankSum=-1.486;DP=469;FS=1.082;HRun=0;HaplotypeScore=84.7737;InbreedingCoeff=0.4002;MQ=55.01;MQ0=26;MQRankSum=1.978;QD=8.69;ReadPosRankSum=1.653;VQSLOD=2.2547;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,1:22:40.11:382,40,0	1/1:1,0:1:2.96:19,3,0	0/1:47,0:9:1.94:2,0,45	0/0:74,0:16:2.17:0,2,102	0/0:21,0:20:39.65:0,40,494	0/0:13,0:13:35.94:0,36,306	0/1:29,1:30:69.88:490,0,70	0/0:16,0:16:45.30:0,45,314	0/0:17,0:17:38.95:0,39,595	1/1:3,12:14:29.94:311,30,0	0/1:2,8:11:10.13:110,0,10	0/0:14,0:14:26.99:0,27,376	0/0:10,0:10:10.82:0,11,249	0/0:13,0:13:20.99:0,21,304	0/0:8,0:8:24.05:0,24,440	1/1:1,12:12:8.89:177,9,0	1/1:1,1:15:9.03:138,9,0	0/0:10,0:10:2.34:0,2,455	0/0:0,0:2:5.58:0,6,33	0/0:4,0:7:2.60:0,3,11	0/0:9,0:10:6.02:0,6,30	0/0:7,0:11:18.27:0,18,126	0/0:9,0:9:21.03:0,21,231	0/0:16,0:15:35.83:0,36,474	0/1:17,0:16:23.82:161,0,24	0/1:15,2:16:29.30:29,0,497	0/0:3,0:4:6.87:0,7,65	0/0:16,0:13:30:0,30,302
chr10	84895400	.	GGA	G	270.79	PASS	AB=0.922;AC=21;AF=0.389;AN=54;BaseQRankSum=4.450;DP=460;FS=18.215;HRun=0;HaplotypeScore=77.3639;InbreedingCoeff=0.1641;MQ=53.49;MQ0=26;MQRankSum=-0.358;QD=1.28;ReadPosRankSum=0.781;VQSLOD=-0.0274;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:23:11.42:71,11,0	1/1:3,0:3:2.99:23,3,0	./.	0/0:70,0:14:0:0,0,0	0/1:21,0:20:12.79:13,0,98	1/1:11,1:13:3.48:33,3,0	0/1:29,0:29:0.71:1,0,122	0/0:19,0:15:8.86:0,9,57	0/0:14,0:14:0.08:0,0,161	1/1:13,0:12:5.78:32,6,0	1/1:10,0:11:5.72:31,6,0	0/1:7,1:13:20.51:21,0,83	0/1:9,1:10:26.51:27,0,39	0/0:12,0:12:7.84:0,8,79	0/0:5,0:8:15.02:0,15,167	1/1:13,0:12:8.61:47,9,0	1/1:16,0:15:8.54:42,9,0	0/1:7,3:10:26.12:26,0,169	0/0:2,0:2:1.25:0,1,3	0/0:7,0:7:0:0,0,0	0/0:15,0:12:0:0,0,0	0/0:11,0:11:3.01:0,3,31	0/0:9,0:9:8.74:0,9,65	0/1:14,3:16:20.54:21,0,97	0/0:14,0:13:3.01:0,3,42	0/1:18,0:17:32.99:33,0,116	0/0:4,0:4:2.98:0,3,21	0/0:19,0:16:8.82:0,9,58
chr10	84895558	.	C	CCTGTT	7726.03	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-7.229;DP=544;FS=8.738;HRun=0;HaplotypeScore=95.9601;InbreedingCoeff=0.8986;MQ=84.34;MQ0=0;MQRankSum=-7.583;QD=64.92;ReadPosRankSum=-1.933;VQSLOD=5.0752;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,2443	0/0:7,0:7:18.06:0,18,384	0/0:20,0:20:51.07:0,51,1009	0/0:25,0:25:57.16:0,57,1049	0/0:24,0:24:72.25:0,72,1523	0/0:32,0:32:96.28:0,96,1948	0/0:41,0:41:99:0,123,2554	1/1:9,8:20:54.15:1471,54,0	0/0:16,0:16:45.15:0,45,920	0/0:22,0:22:60.21:0,60,1271	0/0:18,0:18:51.16:0,51,1034	0/0:16,0:16:45.15:0,45,947	0/0:15,0:15:42.14:0,42,895	0/0:12,0:12:33.11:0,33,691	0/0:13,0:13:39.13:0,39,801	0/0:10,0:10:30.10:0,30,610	0/0:27,0:27:78.27:0,78,1623	0/1:13,0:13:11.46:11,0,653	1/1:2,15:19:54.17:1564,54,0	1/1:0,9:9:27.09:845,27,0	1/1:3,25:30:66.10:1842,66,0	1/1:3,11:14:42.01:1055,42,0	0/0:18,0:18:51.18:0,51,1072	0/0:20,0:20:57.18:0,57,1160	0/0:21,0:21:57.03:0,57,1125	0/0:24,0:24:63.19:0,63,1273	1/1:2,11:13:30.10:937,30,0	0/0:4,0:4:12.04:0,12,256
chr10	84896027	.	G	GGACA	5581.24	PASS	AB=0.577;AC=26;AF=0.464;AN=56;BaseQRankSum=8.290;DP=489;FS=3.379;HRun=0;HaplotypeScore=90.5512;InbreedingCoeff=0.8621;MQ=63.44;MQ0=0;MQRankSum=-8.401;QD=21.30;ReadPosRankSum=-1.668;VQSLOD=4.2394;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,39:42:12.04:314,12,0	1/1:1,5:7:12.04:309,12,0	0/0:27,0:22:23.99:0,24,603	0/0:23,0:15:30.08:0,30,428	0/0:20,0:20:54.13:0,54,940	0/0:18,0:18:51.16:0,51,876	0/1:2,17:20:0:0,0,0	1/1:21,0:18:33.11:553,33,0	0/0:15,0:15:36.12:0,36,650	1/1:24,0:24:55.23:1114,55,0	1/1:12,2:14:22.29:432,22,0	0/0:15,0:15:36.08:0,36,575	0/0:13,0:13:39.13:0,39,709	0/0:18,0:18:54.19:0,54,963	0/0:17,0:17:42.14:0,42,751	1/1:5,7:12:12.04:188,12,0	0/1:9,13:22:25.03:211,0,25	0/0:10,0:10:30.05:0,30,479	1/1:16,0:16:40.74:621,41,0	1/1:18,0:18:26.98:613,27,0	1/1:5,17:22:9.03:203,9,0	1/1:6,0:6:8.95:160,9,0	0/0:11,0:11:30.10:0,30,522	0/0:13,0:13:33.10:0,33,550	1/1:6,14:20:12.50:220,12,0	0/0:24,0:24:25.32:0,25,1032	1/1:17,0:18:37.20:643,37,0	0/0:3,0:3:9.03:0,9,154
chr10	84896030	.	CAG	C	1787.13	PASS	AB=0.855;AC=16;AF=0.286;AN=56;BaseQRankSum=9.159;DP=489;FS=18.358;HRun=0;HaplotypeScore=80.9698;InbreedingCoeff=0.2310;MQ=61.27;MQ0=0;MQRankSum=-5.643;QD=8.94;ReadPosRankSum=1.035;VQSLOD=1.9361;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:5.85:0,6,140	0/1:7,0:7:26.97:27,0,97	0/0:26,0:21:38.10:0,38,752	0/0:21,0:13:32.93:0,33,514	0/0:19,0:19:54.18:0,54,960	0/0:19,0:19:54.17:0,54,951	0/0:20,0:20:2.88:0,3,24	0/1:15,4:16:19.57:158,0,20	0/0:15,0:15:39.13:0,39,708	0/1:7,17:24:99:434,0,225	0/1:11,4:15:92.39:92,0,199	0/0:14,0:14:39.11:0,39,682	0/0:14,0:14:42.14:0,42,758	0/0:18,0:18:54.19:0,54,990	0/0:18,0:18:51.15:0,51,875	0/1:13,0:13:11.68:12,0,189	0/1:22,0:22:17.27:17,0,242	0/0:10,0:10:30.10:0,30,539	0/1:7,9:16:81.31:234,0,81	1/1:2,16:18:26.90:321,27,0	1/1:20,1:22:5.99:76,6,0	1/1:0,6:6:8.89:114,9,0	0/0:12,0:12:33.11:0,33,570	0/0:13,0:13:33.11:0,33,592	0/1:21,0:21:22.76:23,0,88	0/0:24,0:24:72.25:0,72,1297	1/1:2,15:17:40.66:455,41,0	0/0:3,0:3:9.03:0,9,165
chr10	84896037	.	AGAGACG	A	1080.18	PASS	AB=0.992;AC=16;AF=0.286;AN=56;BaseQRankSum=9.993;DP=482;FS=5.768;HRun=0;HaplotypeScore=110.4222;InbreedingCoeff=0.2418;MQ=58.09;MQ0=4;MQRankSum=-4.460;QD=5.54;ReadPosRankSum=-1.006;VQSLOD=1.8251;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:20.96:0,21,446	0/1:8,0:8:23.52:24,0,295	0/0:24,0:19:22.13:0,22,236	0/0:22,0:13:14.88:0,15,196	0/0:20,0:20:41.87:0,42,878	0/0:19,0:19:50.75:0,51,932	0/0:16,0:16:5.92:0,6,91	0/1:17,0:14:30.28:30,0,80	0/0:13,0:13:38.78:0,39,738	0/1:24,0:24:99:156,0,167	0/1:18,0:17:43.86:44,0,197	0/0:12,0:12:33.09:0,33,965	0/0:15,0:15:44.93:0,45,1023	0/0:19,0:18:51.11:0,51,1392	0/0:17,0:17:51.03:0,51,1102	0/1:13,0:13:14.94:15,0,265	0/1:21,0:21:31.52:32,0,291	0/0:14,0:14:41.71:0,42,884	0/1:14,1:13:60.83:76,0,61	1/1:13,5:18:25.49:186,25,0	1/1:19,1:19:5.46:73,5,0	1/1:3,3:6:8.43:96,8,0	0/0:13,0:12:29.78:0,30,455	0/0:12,0:13:29.64:0,30,633	0/1:18,0:18:15.58:16,0,106	0/0:23,0:23:65.76:0,66,995	1/1:10,7:17:43.76:510,44,0	0/0:3,0:3:9.03:0,9,313
chr10	84896043	.	G	GGAGACA	2013.08	PASS	AB=0.989;AC=18;AF=0.321;AN=56;BaseQRankSum=4.663;DP=507;FS=0.646;HRun=0;HaplotypeScore=123.8011;InbreedingCoeff=0.3530;MQ=56.81;MQ0=6;MQRankSum=-2.458;QD=8.42;ReadPosRankSum=-3.488;VQSLOD=1.1206;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:10.29:0,10,166	0/1:9,0:9:1.95:183,0,2	0/0:22,0:17:9.02:0,9,132	0/0:28,0:14:8.86:0,9,136	0/0:15,0:15:27.05:0,27,418	0/0:18,0:18:30.06:0,30,517	0/0:14,0:14:6.02:0,6,92	1/1:23,0:20:14.98:130,15,0	0/0:13,0:13:21.06:0,21,383	1/1:23,0:23:15.05:296,15,0	1/1:19,2:20:20.84:496,21,0	0/0:14,0:14:33.09:0,33,585	0/0:18,0:18:36.08:0,36,597	0/0:19,0:18:36.08:0,36,656	0/0:18,0:18:36.10:0,36,623	1/1:11,3:14:26.93:509,27,0	0/1:19,2:21:19.29:323,0,19	0/0:15,0:15:26.72:0,27,463	0/1:16,0:13:12.89:29,0,13	0/1:20,0:20:16.47:41,0,16	0/1:24,0:23:8.13:18,0,8	0/1:8,0:8:18.89:20,0,19	0/0:13,0:12:12:0,12,192	0/0:14,0:13:21.02:0,21,341	1/1:17,0:18:5.48:111,5,0	0/1:24,0:24:32.83:33,0,364	0/1:18,0:18:4.90:5,0,116	0/0:4,0:4:12.03:0,12,208
chr10	84897968	.	CCT	C	88.21	PASS	AB=0.964;AC=10;AF=0.238;AN=42;BaseQRankSum=2.839;DP=674;FS=16.767;HRun=0;HaplotypeScore=33.5112;InbreedingCoeff=0.0846;MQ=14.57;MQ0=471;MQRankSum=-2.513;QD=0.45;ReadPosRankSum=-1.660;VQSLOD=-0.3649;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:8,0:2:6.02:0,6,107	./.	./.	./.	0/0:34,0:3:6.02:0,6,107	0/1:52,0:4:1.99:2,0,47	./.	0/0:42,0:7:3.01:0,3,38	0/0:39,0:3:9.03:0,9,154	1/1:8,0:3:0.47:1,0,0	0/1:44,1:8:34.85:35,0,41	./.	0/0:41,0:9:12.04:0,12,214	0/1:24,1:3:32.66:33,0,98	1/1:23,1:6:4.56:46,5,0	0/1:20,2:9:29.88:75,0,30	0/0:21,0:8:9.03:0,9,159	0/0:33,0:3:9.03:0,9,139	0/0:10,0:4:3:0,3,53	0/0:57,0:7:2.49:0,2,34	0/0:11,0:6:6.49:0,6,103	0/0:9,0:3:2.61:0,3,53	0/0:49,0:32:27.44:0,27,502	1/1:21,0:3:0.72:2,1,0	0/0:40,0:5:12:0,12,173	0/0:13,0:9:15.05:0,15,250	./.
chr10	84898084	.	TGC	T	55.06	PASS	AB=0.925;AC=5;AF=0.104;AN=48;BaseQRankSum=2.868;DP=368;FS=32.335;HRun=0;HaplotypeScore=36.4370;InbreedingCoeff=0.3155;MQ=34.82;MQ0=76;MQRankSum=-4.368;QD=1.53;ReadPosRankSum=-3.260;VQSLOD=-0.6574;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:1,0:1:0:0,0,0	./.	0/0:17,0:1:3.01:0,3,37	0/1:8,0:8:0.17:0,0,0	0/0:8,0:4:6.02:0,6,102	0/0:35,1:26:34.47:0,34,570	./.	0/0:14,0:11:21.07:0,21,301	0/0:13,0:11:26.24:0,26,448	0/0:3,0:3:0:0,0,0	0/0:17,0:12:24.08:0,24,443	0/0:12,0:10:13.78:0,14,271	0/0:15,0:14:13.40:0,13,225	0/0:20,0:15:23.90:0,24,401	0/0:3,0:2:6.02:0,6,66	0/1:17,7:17:99:127,0,269	0/0:26,0:20:48.16:0,48,858	0/0:13,0:2:3.01:0,3,55	1/1:2,0:1:0.89:2,1,0	0/0:47,0:11:2.56:0,3,18	0/0:6,0:5:0:0,0,0	0/0:5,0:5:1.33:0,1,52	0/0:39,0:30:47.05:0,47,883	0/1:2,0:2:0.07:0,0,0	0/0:10,0:10:19.30:0,19,361	0/0:6,0:3:9.03:0,9,131	./.
chr10	84898222	.	CCT	C	150.03	PASS	AB=0.846;AC=7;AF=0.140;AN=50;BaseQRankSum=3.287;DP=465;FS=4.521;HRun=0;HaplotypeScore=51.6668;InbreedingCoeff=0.2170;MQ=33.45;MQ0=180;MQRankSum=-0.245;QD=1.47;ReadPosRankSum=-1.689;VQSLOD=1.0586;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,4:8:99:108,0,136	./.	./.	./.	0/0:6,0:2:3.01:0,3,54	0/0:20,0:7:18.06:0,18,315	0/0:49,0:26:38.94:0,39,646	0/0:12,0:4:15.05:0,15,250	0/0:17,0:10:27.09:0,27,467	1/1:16,0:2:0.89:2,1,0	0/0:12,0:3:0:0,0,0	0/0:16,0:10:30.10:0,30,531	0/0:19,0:11:27.09:0,27,474	0/0:17,0:7:21.07:0,21,362	0/0:17,0:10:24.08:0,24,421	0/0:14,0:5:12.04:0,12,197	0/0:20,0:12:1.64:0,2,195	0/0:23,0:16:33.11:0,33,591	0/0:10,0:1:3.01:0,3,54	0/0:6,0:2:0.47:0,0,1	0/1:49,2:22:31.69:32,0,33	1/1:8,1:4:2.76:41,3,0	0/0:8,0:3:6.02:0,6,108	0/0:54,0:47:99:0,123,2044	0/1:8,3:5:43.40:74,0,43	0/0:19,0:9:20.99:0,21,360	0/0:16,0:8:21.20:0,21,227	0/0:7,0:3:6.02:0,6,102
chr10	84898224	.	T	TCTCTGC	439.93	PASS	AB=1.000;AC=15;AF=0.341;AN=44;BaseQRankSum=1.913;DP=472;FS=6.957;HRun=0;HaplotypeScore=69.1153;InbreedingCoeff=0.5156;MQ=33.65;MQ0=187;MQRankSum=-4.186;QD=3.06;ReadPosRankSum=-2.726;VQSLOD=0.1494;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:8:2.03:6,2,0	./.	./.	./.	0/0:6,0:2:3.01:0,3,53	0/0:19,0:7:12.04:0,12,240	0/0:50,0:28:26.27:0,26,455	./.	0/0:18,0:11:27.08:0,27,504	1/1:15,0:2:2.04:6,2,0	0/0:10,0:3:0:0,0,0	0/0:19,0:10:9.02:0,9,146	0/0:20,0:11:12.04:0,12,240	0/0:16,0:7:3.01:0,3,60	0/0:17,0:10:12.04:0,12,230	0/0:12,0:5:3.01:0,3,60	0/1:18,0:12:2.82:3,0,60	0/0:24,0:16:23.92:0,24,479	./.	1/1:6,0:2:0.89:2,1,0	1/1:48,0:17:0.80:38,1,0	1/1:9,0:4:3.95:43,4,0	0/0:8,0:4:6.02:0,6,113	0/0:56,0:48:68.50:0,69,1279	1/1:11,0:5:6.02:83,6,0	0/0:20,0:9:5.94:0,6,104	1/1:12,6:10:12.93:385,13,0	./.
chr10	84898940	.	T	TCTC	8500.38	PASS	AB=0.962;AC=17;AF=0.304;AN=56;BaseQRankSum=-9.776;DP=584;FS=10.814;HRun=0;HaplotypeScore=82.5859;InbreedingCoeff=0.9175;MQ=89.05;MQ0=0;MQRankSum=-2.984;QD=42.50;ReadPosRankSum=3.698;VQSLOD=5.9917;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,42:47:93.23:1982,93,0	1/1:1,4:6:12.04:262,12,0	0/0:31,0:31:65.43:0,65,923	0/0:18,0:18:35.43:0,35,414	0/0:13,0:13:30.09:0,30,455	0/0:15,0:14:45.14:0,45,692	1/1:2,16:18:39.13:851,39,0	0/0:29,0:29:81.28:0,81,1270	0/0:22,0:22:63.21:0,63,996	1/1:3,19:23:54.19:1159,54,0	1/1:3,5:8:9.03:181,9,0	0/0:19,0:19:51.17:0,51,808	0/0:15,0:15:45.14:0,45,672	0/0:17,0:17:51.17:0,51,802	0/0:31,0:30:90.31:0,90,1420	1/1:0,16:16:45.15:983,45,0	1/1:1,36:38:93.30:2032,93,0	0/0:17,0:17:42.11:0,42,620	0/0:19,0:19:51.16:0,51,753	0/0:20,0:20:54.12:0,54,824	0/0:40,0:40:99:0,108,1635	0/0:14,0:14:38.79:0,39,557	0/0:15,0:15:36.12:0,36,570	0/0:20,0:20:54.16:0,54,830	1/1:1,17:18:48.16:1045,48,0	0/1:24,1:25:5.41:5,0,822	0/0:23,0:23:66.19:0,66,998	0/0:6,0:6:18.06:0,18,285
chr10	84899961	.	G	GGTGTGTGTGT	412.69	PASS	AB=0.964;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.884;DP=438;FS=7.396;HRun=0;HaplotypeScore=147.1045;InbreedingCoeff=0.1792;MQ=58.34;MQ0=14;MQRankSum=-3.080;QD=2.00;ReadPosRankSum=-3.774;VQSLOD=0.8133;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,6:21:0.30:1,0,0	1/1:9,0:9:3:25,3,0	1/1:25,0:13:1.61:10,2,0	0/0:20,0:10:6:0,6,90	0/0:16,0:16:27.07:0,27,738	0/0:13,0:12:12.02:0,12,360	1/1:23,0:23:6.44:85,6,0	0/1:22,0:22:99:119,0,258	0/0:16,0:16:26.93:0,27,654	0/1:19,0:18:71.63:164,0,72	0/0:9,0:8:5.65:0,6,81	0/0:8,0:8:12.03:0,12,255	0/0:11,0:10:18.06:0,18,525	0/0:9,0:8:15.03:0,15,384	0/0:8,0:8:15.05:0,15,434	0/1:11,0:11:66.13:102,0,66	0/1:19,0:19:26.17:26,0,143	0/0:19,0:18:39.12:0,39,975	0/0:15,0:15:1.66:0,2,222	0/1:16,0:16:0.43:0,0,329	0/1:22,0:20:16.34:16,0,208	0/0:16,0:16:15.90:0,16,207	0/0:19,0:19:23.65:0,24,654	0/0:19,0:18:35.58:0,36,999	1/1:19,0:16:0.47:1,0,0	0/0:18,0:17:9.52:0,10,562	0/0:9,0:9:9.29:0,9,182	0/0:7,0:5:2.90:0,3,90
chr10	84900927	.	GC	G	2901.60	PASS	AB=0.900;AC=17;AF=0.304;AN=56;BaseQRankSum=0.722;DP=531;FS=20.583;HRun=9;HaplotypeScore=66.1258;InbreedingCoeff=0.8649;MQ=74.08;MQ0=0;MQRankSum=-0.021;QD=15.43;ReadPosRankSum=-0.742;VQSLOD=2.0672;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,31:37:80.72:740,81,0	0/0:8,0:8:20.71:0,21,146	0/1:16,2:16:28.79:29,0,209	0/0:20,0:21:1.70:0,2,224	0/0:9,0:9:24.07:0,24,277	0/0:15,0:15:33.10:0,33,381	0/0:49,0:49:99:0,120,1375	1/1:9,10:19:28.92:236,29,0	0/0:13,0:13:33.05:0,33,351	0/0:23,0:23:64.07:0,64,420	0/0:24,0:24:59.11:0,59,405	0/0:19,0:19:54.16:0,54,621	0/0:13,0:13:39.11:0,39,446	0/0:21,0:21:48.12:0,48,539	0/0:12,0:12:30.06:0,30,326	0/0:11,0:11:23.63:0,24,152	0/0:34,0:34:97.47:0,97,645	0/0:22,0:21:60.14:0,60,677	1/1:3,8:12:23.03:195,23,0	1/1:1,14:15:39.02:356,39,0	1/1:8,23:31:38.72:427,39,0	1/1:2,13:15:39.02:357,39,0	0/0:10,0:10:27.08:0,27,311	0/0:20,0:20:45.12:0,45,510	1/1:3,18:21:51.03:466,51,0	0/0:15,0:15:30.09:0,30,346	1/1:4,16:20:32.80:302,33,0	0/0:4,0:4:6.02:0,6,69
chr10	84901231	.	G	GCTGCCC	3709.24	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.117;DP=533;FS=0.638;HRun=0;HaplotypeScore=121.8436;InbreedingCoeff=0.9911;MQ=81.23;MQ0=0;MQRankSum=-9.832;QD=69.99;ReadPosRankSum=-0.001;VQSLOD=4.0431;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:38:75.26:2583,75,0	0/0:7,0:7:18.02:0,18,362	0/0:18,0:18:54.13:0,54,1064	0/0:14,0:14:30.56:0,31,659	0/0:11,0:11:27.09:0,27,615	0/0:11,0:11:27.09:0,27,616	0/0:29,0:29:75.26:0,75,1673	0/0:20,0:20:42.12:0,42,806	0/0:23,0:23:54.18:0,54,1212	0/0:19,0:19:42.14:0,42,906	0/0:16,0:16:42.13:0,42,870	0/0:18,0:18:51.18:0,51,1143	0/0:17,0:17:51.16:0,51,1099	0/0:23,0:23:60.19:0,60,1293	0/0:9,0:9:24.02:0,24,433	0/0:14,0:14:39.11:0,39,804	0/0:36,0:35:99:0,102,2120	0/0:34,0:34:99:0,99,2255	0/0:18,0:18:45.15:0,45,1006	0/0:14,0:14:42.13:0,42,847	0/0:31,0:31:63.19:0,63,1368	0/0:10,0:10:24.08:0,24,548	0/0:15,0:15:39.13:0,39,797	0/0:24,0:24:66.19:0,66,1459	1/1:1,11:15:33.11:1126,33,0	0/0:23,0:23:60.18:0,60,1284	0/0:17,0:16:42.02:0,42,858	0/0:9,0:9:24.08:0,24,546
chr10	84901683	.	GC	G	768.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.401;DP=513;FS=6.820;HRun=4;HaplotypeScore=48.6631;InbreedingCoeff=0.9909;MQ=77.31;MQ0=0;MQRankSum=-1.711;QD=25.63;ReadPosRankSum=0.911;VQSLOD=2.0686;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:30:72.22:864,72,0	0/0:10,0:10:30.10:0,30,419	0/0:14,0:14:36.11:0,36,474	0/0:8,0:8:24.03:0,24,291	0/0:16,0:16:48.13:0,48,637	0/0:19,0:19:57.19:0,57,798	0/0:22,0:22:66.22:0,66,923	0/0:17,0:17:51.15:0,51,684	0/0:15,0:15:45.15:0,45,630	0/0:21,0:21:63.19:0,63,842	0/0:13,0:13:36.12:0,36,504	0/0:16,0:16:45.14:0,45,615	0/0:15,0:15:36.11:0,36,486	0/0:15,0:15:45.11:0,45,605	0/0:11,0:11:33.10:0,33,443	0/0:11,0:11:33.11:0,33,462	0/0:40,0:39:99:0,117,1637	0/0:21,0:21:60.20:0,60,840	0/0:16,0:16:45.15:0,45,630	0/0:8,0:8:24.08:0,24,335	0/0:53,0:53:99:0,147,2040	0/0:14,0:14:36.11:0,36,486	0/0:9,0:9:24.05:0,24,300	0/0:46,0:46:99:0,138,1931	0/0:12,0:12:30.10:0,30,420	0/0:21,0:21:63.19:0,63,864	0/0:10,0:10:30.09:0,30,403	0/0:10,0:10:30.09:0,30,403
chr10	84902337	.	AGGGAGCCGCCATTAGAAAGCTGGACT	A	3464	PASS	AB=0.752;AC=7;AF=0.125;AN=56;BaseQRankSum=7.591;DP=300;FS=25.530;HRun=0;HaplotypeScore=197.0624;InbreedingCoeff=0.1329;MQ=93.79;MQ0=0;MQRankSum=-7.056;QD=67.92;ReadPosRankSum=3.200;VQSLOD=1.7283;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.20:0,57,5073	0/1:4,2:6:99:436,0,368	0/0:13,0:13:36.11:0,36,2067	0/0:17,0:17:31.63:0,32,2353	0/0:9,0:9:24.03:0,24,1929	0/0:12,0:12:36.11:0,36,2558	0/0:17,0:16:45.14:0,45,4366	0/0:17,0:17:51.17:0,51,2823	0/0:13,0:13:39.12:0,39,3812	0/1:9,3:12:99:751,0,409	1/1:0,7:7:12.04:788,12,0	0/0:9,0:9:27.09:0,27,2425	0/0:9,0:9:27.09:0,27,2936	0/0:10,0:10:30.10:0,30,3277	0/0:15,0:15:45.15:0,45,4422	0/1:1,6:7:99:637,0,361	0/1:10,3:13:99:654,0,2380	0/0:25,0:25:72.20:0,72,7942	0/0:16,0:16:48.15:0,48,3059	0/0:3,0:3:5.41:0,5,624	0/0:15,0:15:42.60:0,43,3300	0/0:6,0:6:18.05:0,18,648	0/0:4,0:4:11.99:0,12,525	0/0:5,0:5:15.05:0,15,1346	0/0:2,0:2:6.02:0,6,526	0/1:5,1:6:99:198,0,725	0/0:9,0:9:27.09:0,27,2684	0/0:4,0:4:12.04:0,12,1371
chr10	84902448	.	AAAAT	A	464.01	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=4.879;DP=268;FS=1.497;HRun=0;HaplotypeScore=54.8146;InbreedingCoeff=0.2266;MQ=58.09;MQ0=11;MQRankSum=-1.764;QD=3.36;ReadPosRankSum=-2.978;VQSLOD=0.4180;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:14:3.89:121,0,4	0/0:4,0:3:6.49:0,6,77	0/1:13,0:5:1.83:2,0,7	0/1:29,0:5:0.43:0,0,58	0/0:11,0:11:30.03:0,30,484	0/0:17,0:17:51.13:0,51,1036	1/1:7,0:4:2.96:23,3,0	0/1:18,0:18:50.64:51,0,137	0/0:5,0:5:15.02:0,15,208	0/0:4,0:2:5.88:0,6,49	0/1:10,0:9:30.58:31,0,87	0/0:2,0:2:6.02:0,6,78	0/0:2,0:2:6.02:0,6,98	0/0:5,0:5:15.05:0,15,353	0/0:4,0:4:11.96:0,12,190	0/0:3,0:3:5.89:0,6,75	0/0:20,0:20:39.93:0,40,515	0/0:24,0:24:71.21:0,71,1295	0/1:15,0:14:63.05:63,0,184	1/1:6,0:5:11.06:111,11,0	1/1:3,0:3:2.97:20,3,0	1/1:3,4:7:11.98:131,12,0	0/0:8,0:8:21.59:0,22,293	0/0:2,0:2:6.02:0,6,99	0/1:5,0:6:37.58:54,0,38	0/0:11,0:11:32.42:0,32,416	0/1:10,0:10:13.55:14,0,72	0/0:8,0:8:20.93:0,21,313
chr10	84902450	.	AAT	A	501.21	PASS	AB=0.977;AC=17;AF=0.304;AN=56;BaseQRankSum=7.642;DP=261;FS=1.331;HRun=0;HaplotypeScore=45.7404;InbreedingCoeff=0.3519;MQ=58.47;MQ0=10;MQRankSum=-1.048;QD=3.80;ReadPosRankSum=-1.993;VQSLOD=1.5508;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,4:13:19.58:255,20,0	0/1:4,0:3:10.48:10,0,23	0/1:15,0:5:3.99:6,0,4	0/1:28,0:5:4.44:4,0,29	0/0:11,0:11:30:0,30,349	0/0:17,0:17:51.12:0,51,699	1/1:3,3:3:3.01:37,3,0	0/1:16,2:18:2.98:91,0,3	0/0:5,0:5:15.02:0,15,181	0/0:4,0:2:5.78:0,6,32	0/0:8,0:7:4.45:0,4,58	0/0:2,0:2:5.99:0,6,68	0/0:2,0:2:6.02:0,6,77	0/0:5,0:5:15.05:0,15,224	0/0:4,0:4:11.89:0,12,135	0/0:2,0:2:5.88:0,6,52	0/0:20,0:20:24.94:0,25,189	0/0:24,0:24:44.13:0,44,833	0/1:14,1:14:32.78:82,0,33	1/1:5,0:5:9.31:51,9,0	0/0:3,0:3:1.25:0,1,3	1/1:6,0:6:10.16:47,10,0	0/1:8,0:8:3.83:4,0,207	0/0:2,0:2:6.02:0,6,94	0/1:6,0:6:13.28:35,0,13	0/0:11,0:11:32.26:0,32,309	1/1:7,0:7:7.86:43,8,0	0/0:9,0:9:26.86:0,27,294
chr10	84902451	.	AT	A	721.24	PASS	AB=0.991;AC=21;AF=0.389;AN=54;BaseQRankSum=8.881;DP=261;FS=0.000;HRun=1;HaplotypeScore=41.9589;InbreedingCoeff=0.5065;MQ=58.49;MQ0=10;MQRankSum=-4.649;QD=5.59;ReadPosRankSum=0.393;VQSLOD=0.3292;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:22.02:148,22,0	0/1:4,0:3:0.74:14,0,1	0/1:15,0:5:1.48:22,0,1	0/0:31,0:6:2.43:0,2,61	0/0:12,0:12:33:0,33,321	0/0:17,0:17:50.94:0,51,533	1/1:5,0:3:2.94:18,3,0	1/1:18,0:18:40.87:210,41,0	0/0:5,0:5:15.01:0,15,147	0/0:3,0:2:1:0,1,4	1/1:7,0:6:1.14:15,1,0	0/0:2,0:2:6.01:0,6,63	0/0:2,0:2:6.01:0,6,61	0/0:5,0:5:15.02:0,15,164	0/0:4,0:4:8.94:0,9,98	0/0:2,0:2:0.60:0,1,20	0/1:20,1:21:14.86:15,0,49	0/0:24,0:24:57.69:0,58,639	1/1:15,0:14:2.62:127,3,0	1/1:5,1:6:14.61:104,15,0	./.	1/1:4,1:5:8.86:37,9,0	0/1:7,0:7:2.16:2,0,165	0/0:2,0:2:6.02:0,6,73	0/1:6,0:6:0.88:42,0,1	0/0:11,0:11:27.71:0,28,263	1/1:5,2:7:19.52:136,20,0	0/0:9,0:9:24.87:0,25,240
chr10	84902452	.	T	TA	1586.81	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=4.995;DP=269;FS=0.000;HRun=13;HaplotypeScore=43.0444;InbreedingCoeff=0.7345;MQ=58.06;MQ0=11;MQRankSum=-2.471;QD=17.63;ReadPosRankSum=-1.105;VQSLOD=4.0695;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,6:14:27.45:248,27,0	0/0:4,0:3:5.99:0,6,62	0/1:16,0:5:2.72:12,0,3	0/0:30,0:6:0.75:0,1,62	0/0:13,0:13:30.08:0,30,354	0/0:17,0:17:51.16:0,51,620	0/0:6,0:4:2.50:0,2,6	1/1:19,0:19:50.63:458,51,0	0/0:5,0:5:15.05:0,15,185	0/0:3,0:2:6:0,6,53	0/0:7,0:6:11.36:0,11,122	0/0:2,0:2:3.01:0,3,37	0/0:2,0:2:6.01:0,6,65	0/0:5,0:5:15.05:0,15,185	0/0:4,0:4:9.03:0,9,111	0/0:2,0:2:6.01:0,6,62	0/0:21,0:21:47.23:0,47,459	0/0:25,0:25:69.20:0,69,813	1/1:12,4:15:36.28:452,36,0	1/1:6,0:6:15.01:140,15,0	./.	1/1:5,0:5:11.65:66,12,0	0/0:6,0:6:12.04:0,12,149	0/0:2,0:2:6.02:0,6,74	1/1:3,3:7:15.02:177,15,0	0/0:11,0:11:30.08:0,30,354	1/1:7,0:7:20.98:218,21,0	0/0:9,0:9:21.06:0,21,247
chr10	84902476	.	T	TA	969.61	PASS	AB=0.731;AC=21;AF=0.389;AN=54;BaseQRankSum=2.259;DP=283;FS=1.357;HRun=11;HaplotypeScore=43.9649;InbreedingCoeff=0.5105;MQ=61.09;MQ0=12;MQRankSum=-1.700;QD=7.58;ReadPosRankSum=-2.242;VQSLOD=0.9328;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:10.33:0,10,99	./.	0/1:19,0:5:0.05:0,0,0	0/0:33,0:9:9.49:0,9,56	0/0:11,0:11:23.90:0,24,186	0/0:21,0:21:59.72:0,60,458	1/1:7,0:7:17.58:105,18,0	0/1:11,11:22:2.82:301,0,3	0/0:6,0:6:17.93:0,18,139	1/1:0,0:3:6.57:30,7,0	1/1:5,0:7:8.03:42,8,0	0/1:1,1:2:12.93:13,0,17	0/0:3,0:3:8.97:0,9,70	0/0:4,0:4:11.19:0,11,76	0/0:2,0:2:5.48:0,5,32	0/1:2,0:4:14.31:14,0,15	1/1:10,0:21:15.21:70,15,0	0/0:27,0:28:59.68:0,60,456	0/1:10,12:22:30.39:276,0,30	1/1:0,2:2:3.01:30,3,0	1/1:2,5:7:6.01:61,6,0	1/1:0,1:1:3.01:30,3,0	0/0:2,0:2:5.98:0,6,46	0/0:1,0:1:2.99:0,3,23	0/0:1,0:10:14.26:0,14,42	0/0:14,0:14:41.78:0,42,319	1/1:5,5:10:18.01:173,18,0	0/0:8,0:8:20.91:0,21,162
chr10	84902484	.	A	AG	149.06	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=4.670;DP=295;FS=9.983;HRun=0;HaplotypeScore=49.4728;InbreedingCoeff=0.2697;MQ=62.65;MQ0=11;MQRankSum=-0.592;QD=2.92;ReadPosRankSum=1.540;VQSLOD=1.2476;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:10:2.44:2,0,203	./.	0/0:17,0:3:2.80:0,3,13	0/0:29,0:9:19.37:0,19,163	0/0:12,0:12:33.09:0,33,415	0/0:21,0:21:63.20:0,63,859	1/1:1,8:9:18.06:227,18,0	0/0:22,0:22:5.67:0,6,255	0/0:6,0:6:18.06:0,18,251	0/0:6,0:6:17.88:0,18,142	0/0:6,0:6:12.45:0,12,66	0/0:2,0:2:0.39:0,0,38	0/0:4,0:4:12.03:0,12,151	0/0:5,0:5:15.04:0,15,185	0/0:3,0:3:6.02:0,6,77	0/0:5,0:5:11.84:0,12,103	0/0:23,0:23:34.64:0,35,228	0/0:25,0:25:66.18:0,66,878	0/1:22,0:21:18.05:18,0,224	0/1:3,0:3:0.65:1,0,22	0/0:8,0:8:1.57:0,2,46	0/0:3,0:3:4.43:0,4,52	0/0:3,0:3:9.02:0,9,110	0/0:2,0:2:3.01:0,3,42	0/0:13,0:12:23.32:0,23,140	0/0:19,0:19:54.12:0,54,687	1/1:7,0:7:1.86:11,2,0	0/0:9,0:9:27.06:0,27,340
chr10	84902821	.	A	ACC	3566.59	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-11.939;DP=589;FS=7.144;HRun=5;HaplotypeScore=71.9963;InbreedingCoeff=0.9632;MQ=85.00;MQ0=1;MQRankSum=-2.006;QD=39.63;ReadPosRankSum=1.371;VQSLOD=2.8567;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,42:43:99:1783,102,0	0/0:4,0:4:6:0,6,62	0/0:26,0:26:60.16:0,60,724	0/0:24,0:23:44.14:0,44,534	0/0:20,0:20:57.15:0,57,698	0/0:19,0:19:57.18:0,57,727	1/1:4,21:25:48.16:840,48,0	0/0:39,0:39:99:0,102,1295	0/0:18,0:18:45.12:0,45,558	0/0:25,0:25:72.22:0,72,907	0/0:21,0:21:54.17:0,54,687	0/0:12,0:12:36.12:0,36,458	0/0:12,0:12:36.12:0,36,458	0/0:14,0:14:36.11:0,36,458	0/0:24,0:24:69.20:0,69,865	0/0:10,0:10:30.07:0,30,364	0/0:18,0:18:54.17:0,54,687	0/0:20,0:20:57.18:0,57,724	0/0:24,0:24:66.20:0,66,826	0/0:21,0:21:60.18:0,60,748	0/0:22,0:22:66.20:0,66,827	0/0:18,0:18:48.15:0,48,610	0/0:12,0:12:36.12:0,36,458	0/0:32,0:32:84.22:0,84,1052	1/1:0,21:21:54.18:944,54,0	0/0:27,0:27:75.24:0,75,951	0/0:22,0:22:60.19:0,60,764	0/0:15,0:15:45.14:0,45,572
chr10	84903131	.	T	TCAAAA	4482.18	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=-2.452;DP=487;FS=16.459;HRun=0;HaplotypeScore=102.6933;InbreedingCoeff=0.7765;MQ=58.88;MQ0=6;MQRankSum=-5.429;QD=35.02;ReadPosRankSum=-0.823;VQSLOD=3.6102;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:33.10:0,33,563	0/0:6,0:6:12.04:0,12,205	0/0:24,0:12:6:0,6,64	0/0:36,0:19:4.33:0,4,139	0/0:22,0:22:39.13:0,39,700	0/0:15,0:15:18.06:0,18,324	0/0:5,0:10:13.90:0,14,118	0/1:24,0:24:7.24:420,0,7	0/0:16,0:16:15.05:0,15,275	0/0:18,0:18:42.14:0,42,742	0/0:24,0:24:48.15:0,48,845	0/0:10,0:10:9.03:0,9,165	0/0:16,0:16:12.04:0,12,206	0/0:8,0:8:9.03:0,9,165	0/1:10,0:10:0:0,0,0	0/0:17,0:17:27.08:0,27,463	0/0:23,0:23:45.11:0,45,783	0/0:22,0:22:42.13:0,42,720	1/1:11,2:13:21.07:399,21,0	1/1:21,8:29:54.19:1431,54,0	1/1:9,1:10:9.03:220,9,0	1/1:13,8:21:42.62:1159,43,0	0/0:12,0:12:24.08:0,24,425	0/0:16,0:16:21.07:0,21,378	0/0:19,0:18:36.11:0,36,622	0/0:15,0:15:21.07:0,21,376	1/1:18,3:21:33.11:853,33,0	0/0:8,0:7:18.06:0,18,318
chr10	84903169	.	CA	C	2017.41	PASS	AB=0.810;AC=28;AF=0.500;AN=56;BaseQRankSum=10.120;DP=610;FS=1.772;HRun=13;HaplotypeScore=98.0247;InbreedingCoeff=0.6823;MQ=54.11;MQ0=18;MQRankSum=-3.310;QD=6.25;ReadPosRankSum=1.151;VQSLOD=2.7862;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:23:24.43:71,24,0	1/1:2,0:8:10.18:30,10,0	0/0:59,0:13:4.01:0,4,23	0/0:79,2:20:18.83:0,19,168	0/1:19,3:22:2.80:3,0,439	0/0:14,0:15:39.03:0,39,366	1/1:3,0:12:16.29:48,16,0	1/1:15,17:32:30.44:385,30,0	0/0:13,0:14:35.79:0,36,322	1/1:6,0:22:20.25:71,20,0	1/1:7,0:28:32.37:100,32,0	0/0:11,1:12:8.24:0,8,237	0/0:9,0:9:1.01:0,1,141	0/1:7,0:8:5.33:5,0,87	0/0:1,0:12:17.21:0,17,100	1/1:2,0:16:24.44:71,24,0	1/1:5,2:26:41.24:157,41,0	0/0:21,2:23:22.46:0,22,461	0/1:7,6:10:5.37:125,0,5	1/1:9,18:29:60.73:427,61,0	1/1:4,2:6:5.93:44,6,0	1/1:5,13:19:37.77:263,38,0	0/0:11,0:13:26.03:0,26,265	0/0:10,0:14:29.88:0,30,277	1/1:7,0:26:41.88:132,42,0	0/0:18,0:22:53.68:0,54,486	0/1:15,14:29:29.48:293,0,29	0/0:11,0:10:18:0,18,163
chr10	84903203	.	CA	C	1360.56	PASS	AB=0.990;AC=13;AF=0.232;AN=56;BaseQRankSum=9.865;DP=613;FS=2.319;HRun=5;HaplotypeScore=89.6775;InbreedingCoeff=0.7127;MQ=57.92;MQ0=18;MQRankSum=-5.213;QD=8.67;ReadPosRankSum=0.853;VQSLOD=0.4458;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:59.54:0,60,768	0/0:4,0:4:12.03:0,12,150	0/0:68,0:17:33.32:0,33,336	0/0:77,0:21:19.13:0,19,226	0/0:22,0:22:63.19:0,63,827	0/0:20,0:20:60.06:0,60,780	0/0:12,0:12:30.06:0,30,388	0/1:33,1:33:59.19:59,0,123	0/0:11,0:11:27.08:0,27,351	0/0:19,0:19:54.18:0,54,732	0/0:24,0:24:71.97:0,72,953	0/0:13,0:13:33.11:0,33,439	0/1:8,0:8:1.16:1,0,225	0/0:9,0:9:24.07:0,24,308	0/0:17,0:17:36.09:0,36,473	0/0:16,0:16:42.14:0,42,573	0/0:24,0:23:45.29:0,45,628	0/0:25,0:25:66.16:0,66,861	0/1:14,0:14:17.31:43,0,17	1/1:23,0:23:43.70:176,44,0	1/1:8,0:8:7.53:34,8,0	1/1:14,0:14:21.91:84,22,0	0/0:17,0:17:48.15:0,48,641	0/0:11,0:11:21.05:0,21,256	1/1:4,23:26:78.22:881,78,0	0/0:24,0:24:69.20:0,69,912	1/1:28,1:29:33.89:258,34,0	0/0:14,0:14:42.14:0,42,574
chr10	84903208	.	AC	A	2991.19	PASS	AB=0.875;AC=15;AF=0.268;AN=56;BaseQRankSum=7.410;DP=600;FS=0.378;HRun=6;HaplotypeScore=81.4969;InbreedingCoeff=0.8605;MQ=60.58;MQ0=19;MQRankSum=-5.992;QD=19.17;ReadPosRankSum=-0.672;VQSLOD=3.0399;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:54.15:0,54,674	0/0:4,0:4:12.03:0,12,144	0/0:69,1:21:41.02:0,41,426	0/0:71,0:22:23.92:0,24,240	0/0:22,0:22:63.16:0,63,770	0/0:20,0:20:53.50:0,53,691	0/0:10,0:10:27.09:0,27,351	1/1:9,22:30:57.21:708,57,0	0/0:9,0:9:27.07:0,27,338	0/0:21,0:21:60.16:0,60,736	0/0:26,0:26:69.66:0,70,923	0/0:11,0:11:32.64:0,33,380	0/1:6,1:7:10.68:11,0,214	0/0:9,0:9:24.05:0,24,282	0/0:17,0:17:36.05:0,36,461	0/0:16,0:16:45.12:0,45,557	0/0:22,0:21:43.34:0,43,564	0/0:23,0:23:60.17:0,60,766	1/1:4,14:19:24.19:400,24,0	1/1:0,20:20:60.05:616,60,0	1/1:3,5:8:9.02:96,9,0	1/1:3,9:12:30.04:309,30,0	0/0:17,0:17:48.13:0,48,611	0/0:9,0:9:17.95:0,18,195	1/1:29,0:28:2.22:234,2,0	0/0:24,0:24:63.20:0,63,822	1/1:3,27:30:77.22:808,77,0	0/0:14,0:14:42.14:0,42,549
chr10	84904919	.	T	TA	6457.91	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-1.536;DP=510;FS=1.102;HRun=7;HaplotypeScore=72.3919;InbreedingCoeff=0.9954;MQ=76.28;MQ0=0;MQRankSum=-4.975;QD=23.23;ReadPosRankSum=-1.243;VQSLOD=4.3887;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,34:37:99:1196,99,0	1/1:4,12:16:36.07:419,36,0	0/0:15,0:15:42.02:0,42,391	0/0:7,0:7:14.81:0,15,129	0/0:23,0:23:60.08:0,60,573	0/0:18,0:18:54.09:0,54,521	1/1:2,16:18:48.15:580,48,0	1/1:9,0:34:80.30:418,80,0	0/0:14,0:14:39.06:0,39,376	1/1:2,13:15:36.11:435,36,0	1/1:2,22:24:63.19:761,63,0	0/0:18,0:18:51.08:0,51,492	0/0:18,0:18:54.09:0,54,521	0/0:20,0:20:51.07:0,51,492	0/0:21,0:21:57.08:0,57,550	1/1:2,17:19:48.15:580,48,0	1/1:1,12:13:30.09:362,30,0	0/0:9,0:9:20.99:0,21,194	1/1:6,0:21:51.87:276,52,0	1/1:5,0:18:43.30:229,43,0	1/1:2,0:8:17.25:88,17,0	1/1:1,1:14:37.38:190,37,0	0/0:19,0:19:57.09:0,57,550	0/0:13,0:13:30:0,30,280	1/1:2,21:23:60.18:725,60,0	0/0:26,1:27:35.86:0,36,622	1/1:8,0:18:37.57:200,38,0	0/0:10,0:10:27.04:0,27,261
chr10	84905366	.	T	TACAC	1488.57	PASS	AB=0.905;AC=22;AF=0.440;AN=50;BaseQRankSum=0.524;DP=522;FS=4.066;HRun=0;HaplotypeScore=118.6989;InbreedingCoeff=0.5982;MQ=59.49;MQ0=9;MQRankSum=-3.085;QD=6.08;ReadPosRankSum=-2.183;VQSLOD=2.1473;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,1:27:5.22:91,5,0	0/1:2,0:4:6.44:6,0,20	./.	./.	0/1:19,0:21:3.51:4,0,46	0/0:20,0:21:23.94:0,24,287	0/0:28,0:29:11.43:0,11,148	1/1:17,0:16:14.96:153,15,0	0/0:22,0:24:15.04:0,15,212	1/1:13,0:14:4.33:24,4,0	1/1:18,0:18:3.01:62,3,0	0/0:16,0:18:15.02:0,15,168	0/0:21,0:22:12.01:0,12,142	0/0:22,0:22:20.83:0,21,211	0/0:20,0:20:15.94:0,16,231	1/1:10,2:12:6.02:140,6,0	1/1:25,3:28:9.92:356,10,0	0/1:11,0:10:1.77:2,0,84	1/1:20,0:20:11.99:178,12,0	1/1:14,0:14:9.02:137,9,0	0/1:39,0:36:0.65:297,0,1	0/0:18,0:18:9.02:0,9,118	0/0:8,0:9:5.98:0,6,74	0/0:26,0:26:18.52:0,19,277	0/0:10,0:10:7.26:0,7,96	./.	1/1:15,1:20:15.48:213,15,0	0/0:15,0:15:6.02:0,6,92
chr10	84905639	.	A	AGTG	5397.15	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.956;DP=616;FS=0.424;HRun=0;HaplotypeScore=81.4393;InbreedingCoeff=0.9974;MQ=78.02;MQ0=0;MQRankSum=-2.852;QD=46.13;ReadPosRankSum=0.719;VQSLOD=6.3019;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.16:0,69,988	1/1:1,8:9:18.06:393,18,0	0/0:16,0:16:48.10:0,48,664	0/0:11,0:11:24.05:0,24,352	0/0:36,0:36:99:0,105,1616	0/0:24,0:24:66.21:0,66,1021	0/0:16,0:16:42.14:0,42,660	0/0:37,0:37:84.22:0,84,1263	0/0:29,0:29:75.24:0,75,1166	1/1:3,21:28:81.21:1596,81,0	1/1:11,21:32:60.21:1257,60,0	0/0:21,0:21:57.15:0,57,837	0/0:19,0:19:48.16:0,48,761	0/0:14,0:14:42.10:0,42,617	0/0:13,0:13:39.13:0,39,618	1/1:4,14:19:30.10:644,30,0	1/1:2,27:29:69.24:1507,69,0	0/0:20,0:20:54.18:0,54,856	0/0:15,0:15:42.14:0,42,643	0/0:37,0:37:99:0,105,1620	0/0:19,0:19:57.11:0,57,828	0/0:15,0:15:42.14:0,42,665	0/0:24,0:24:69.23:0,69,1069	0/0:15,0:15:42.14:0,42,666	0/0:15,0:15:36.12:0,36,571	0/0:20,0:20:54.16:0,54,814	0/0:21,0:21:63.20:0,63,975	0/0:37,0:37:99:0,108,1710
chr10	84905644	.	T	TGGG	3172.32	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.974;DP=596;FS=0.000;HRun=2;HaplotypeScore=87.3763;InbreedingCoeff=0.9804;MQ=79.14;MQ0=0;MQRankSum=-1.052;QD=29.65;ReadPosRankSum=1.613;VQSLOD=1.4704;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.19:0,72,1168	1/1:8,0:8:18.06:255,18,0	0/0:17,0:17:51.16:0,51,819	0/0:11,0:11:24.08:0,24,399	0/0:36,0:36:99:0,105,1836	0/0:23,0:23:69.22:0,69,1182	0/0:17,0:17:48.13:0,48,789	0/0:35,0:35:99:0,99,1597	0/0:27,0:27:75.24:0,75,1294	1/1:27,1:28:23.38:867,23,0	1/1:20,5:26:38.15:888,38,0	0/0:19,0:19:57.20:0,57,991	0/0:18,0:18:51.16:0,51,870	0/0:14,0:14:42.14:0,42,725	0/0:14,0:14:42.13:0,42,712	1/1:17,0:17:8.12:402,8,0	1/1:28,0:28:32.27:931,32,0	0/0:18,0:18:54.19:0,54,952	0/0:16,0:16:42.14:0,42,738	0/0:36,0:36:99:0,105,1841	0/0:20,0:20:60.14:0,60,963	0/0:14,0:14:42.14:0,42,739	0/0:23,0:23:69.24:0,69,1211	0/0:14,0:14:42.14:0,42,740	0/0:13,0:13:39.12:0,39,659	0/0:19,0:19:57.17:0,57,927	0/0:21,0:21:63.22:0,63,1106	0/0:39,0:39:99:0,116,1944
chr10	84906602	.	TGTCCGCTCCCC	T	297.81	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.652;DP=474;FS=2.023;HRun=0;HaplotypeScore=146.0056;InbreedingCoeff=0.6968;MQ=80.49;MQ0=0;MQRankSum=-3.813;QD=27.07;ReadPosRankSum=-0.247;VQSLOD=3.2944;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:63.22:0,63,3294	0/0:10,0:10:27.09:0,27,1352	0/0:11,0:11:27.05:0,27,1082	0/0:15,0:15:35.93:0,36,1353	0/0:6,0:6:18.06:0,18,853	0/0:20,0:20:45.14:0,45,2131	0/0:33,0:33:84.29:0,84,4112	0/0:16,0:16:33.08:0,33,1310	0/0:19,0:19:48.16:0,48,2519	0/0:5,0:5:6.02:0,6,333	0/0:3,0:3:9.03:0,9,500	0/0:20,0:20:48.15:0,48,2355	0/0:15,0:15:36.12:0,36,1905	0/0:16,0:16:33.11:0,33,1796	0/0:15,0:15:39.13:0,39,2027	0/0:9,0:9:21.03:0,21,937	0/0:42,0:41:99:0,111,5953	0/0:29,0:29:75.26:0,75,3938	0/0:13,0:13:27.09:0,27,1146	0/0:7,0:7:12.04:0,12,665	0/0:57,0:57:99:0,150,7289	0/0:4,0:4:9.03:0,9,480	0/0:5,0:5:8.07:0,8,373	0/0:33,0:33:90.26:0,90,4517	1/1:4,7:11:12.04:384,12,0	0/0:6,0:6:12.04:0,12,656	0/0:17,0:17:45.15:0,45,2346	0/0:12,0:12:33.11:0,33,1711
chr10	84906860	.	GGTGTGTGT	G	639.49	PASS	AC=4;AF=0.080;AN=50;BaseQRankSum=3.044;DP=488;FS=0.000;HRun=0;HaplotypeScore=110.6408;InbreedingCoeff=0.6610;MQ=59.79;MQ0=15;MQRankSum=-5.570;QD=11.03;ReadPosRankSum=-2.105;VQSLOD=2.0751;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,15:38:24.08:554,24,0	0/0:4,0:4:3.01:0,3,65	./.	./.	0/0:4,0:4:6:0,6,146	0/0:17,0:18:27.08:0,27,743	1/1:16,2:19:11.40:198,11,0	0/0:22,0:22:15.04:0,15,386	0/0:15,0:16:27.98:0,28,717	0/0:10,0:10:18.06:0,18,573	./.	0/0:12,0:13:24.07:0,24,779	0/0:10,0:10:24.08:0,24,731	0/0:7,0:8:9.03:0,9,259	0/0:12,0:12:21.04:0,21,465	0/0:7,0:7:9.03:0,9,311	0/0:25,0:26:54.14:0,54,1708	0/0:15,0:27:37.23:0,37,1073	0/0:21,0:20:12.04:0,12,389	0/0:11,0:11:15.02:0,15,380	0/0:44,0:44:54.19:0,54,1629	0/0:14,0:16:18.05:0,18,493	0/0:8,0:8:3.01:0,3,85	0/0:27,0:29:54.17:0,54,1842	0/0:8,0:8:6.02:0,6,228	0/0:12,0:11:21.07:0,21,478	0/0:17,0:16:18.06:0,18,705	0/0:7,0:9:9.03:0,9,299
chr10	84907197	.	CG	C	1997.97	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.438;DP=622;FS=2.144;HRun=1;HaplotypeScore=88.3058;InbreedingCoeff=0.9819;MQ=86.84;MQ0=0;MQRankSum=-7.253;QD=18.33;ReadPosRankSum=-0.705;VQSLOD=3.7002;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,151,2394	1/1:0,5:5:15.01:135,15,0	0/0:22,0:22:54.16:0,54,837	0/0:23,0:23:66.03:0,66,919	0/0:28,0:28:84.29:0,84,1340	0/0:20,0:20:60.20:0,60,958	1/1:1,0:23:16.83:44,17,0	0/0:22,0:22:66.23:0,66,1051	0/0:18,0:18:54.17:0,54,838	1/1:0,16:16:48:536,48,0	1/1:1,16:16:42.03:403,42,0	0/0:16,0:16:48.16:0,48,766	0/0:19,0:19:57.14:0,57,881	0/0:18,0:18:54.18:0,54,862	0/0:21,0:21:63.21:0,63,1006	1/1:1,11:12:35.67:365,36,0	1/1:5,18:23:65.45:689,65,0	0/0:22,0:22:66.23:0,66,1054	0/0:27,0:27:75.26:0,75,1191	0/0:32,0:32:96.33:0,96,1531	0/0:36,0:36:99:0,105,1643	0/0:22,0:22:63.21:0,63,998	0/0:20,0:20:57.18:0,57,885	0/0:26,0:26:72.20:0,72,1121	1/1:0,0:13:7.97:20,8,0	0/0:25,1:26:40.43:0,40,1137	0/0:34,0:33:96.33:0,96,1493	0/0:11,0:11:33.11:0,33,526
chr10	84907200	.	CGA	C	2545.67	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.614;DP=624;FS=0.000;HRun=0;HaplotypeScore=98.6838;InbreedingCoeff=0.9982;MQ=83.96;MQ0=0;MQRankSum=-9.254;QD=23.57;ReadPosRankSum=-0.684;VQSLOD=3.8952;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,2760	1/1:1,5:6:18.03:180,18,0	0/0:21,0:21:54.18:0,54,1009	0/0:19,0:19:54.15:0,54,971	0/0:29,0:29:84.29:0,84,1611	0/0:20,0:20:60.19:0,60,1125	1/1:22,0:22:53.84:263,54,0	0/0:24,0:24:69.24:0,69,1314	0/0:20,0:20:60.21:0,60,1159	1/1:0,16:16:48.11:602,48,0	1/1:1,16:16:42.10:460,42,0	0/0:16,0:16:48.16:0,48,927	0/0:20,0:20:60.21:0,60,1142	0/0:18,0:18:48.16:0,48,927	0/0:22,0:22:63.22:0,63,1217	1/1:1,11:12:35.59:408,36,0	1/1:4,18:22:59.87:707,60,0	0/0:23,0:23:69.24:0,69,1332	0/0:26,0:26:72.25:0,72,1386	0/0:33,0:33:96.32:0,96,1812	0/0:37,0:37:99:0,111,2123	0/0:24,0:24:69.24:0,69,1328	0/0:20,0:20:60.21:0,60,1150	0/0:25,0:25:72.25:0,72,1390	1/1:13,0:13:25.52:125,26,0	0/0:24,1:25:33.44:0,33,1333	0/0:31,0:30:87.30:0,87,1678	0/0:13,0:13:39.13:0,39,736
chr10	84907447	.	ACCAG	A	3952.30	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=6.138;DP=485;FS=8.464;HRun=0;HaplotypeScore=97.4149;InbreedingCoeff=0.8759;MQ=68.69;MQ0=2;MQRankSum=-3.584;QD=28.85;ReadPosRankSum=-0.469;VQSLOD=3.0070;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:14.27:413,14,0	1/1:11,4:15:35.91:583,36,0	0/0:21,0:14:12.91:0,13,559	0/0:20,0:16:10.30:0,10,536	0/0:17,0:17:51.17:0,51,1070	0/0:17,0:17:48.15:0,48,989	0/0:18,0:18:36.06:0,36,500	0/0:19,0:19:5.47:0,5,532	0/0:24,0:24:66.23:0,66,1528	1/1:15,3:18:48.16:805,48,0	1/1:14,8:22:60.20:995,60,0	0/0:20,0:20:54.15:0,54,1124	0/0:14,0:14:36.12:0,36,796	0/0:14,0:14:39.13:0,39,900	0/0:14,0:14:39.12:0,39,764	1/1:2,13:15:9.03:159,9,0	1/1:12,1:13:36.12:597,36,0	0/0:18,0:18:51.17:0,51,1160	0/0:13,0:13:22.50:0,22,286	0/0:19,0:19:19.75:0,20,386	0/0:13,0:13:18.04:0,18,265	0/0:18,0:18:17.07:0,17,358	0/0:13,0:13:39.13:0,39,775	0/0:27,0:27:64.35:0,64,1758	1/1:7,1:8:24.08:397,24,0	0/0:21,0:21:11.37:0,11,1311	0/1:19,0:19:4.47:4,0,236	0/0:8,0:8:24.08:0,24,552
chr10	84907456	.	CCAAA	C	2544.63	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=8.211;DP=513;FS=7.211;HRun=0;HaplotypeScore=108.9917;InbreedingCoeff=0.7741;MQ=63.97;MQ0=3;MQRankSum=-0.559;QD=11.41;ReadPosRankSum=-0.196;VQSLOD=2.5148;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:56.03:0,56,830	0/1:13,0:13:11.68:61,0,12	0/0:21,0:12:11.59:0,12,121	0/0:20,0:15:3.30:0,3,47	0/0:21,0:21:42.06:0,42,688	0/0:19,0:19:36.12:0,36,783	1/1:15,0:15:11.07:50,11,0	1/1:12,8:20:27.04:369,27,0	0/0:26,0:26:66.08:0,66,1141	1/1:20,0:20:10.18:66,10,0	1/1:23,0:23:7.54:97,8,0	0/0:19,0:19:48.01:0,48,832	0/0:15,0:15:33.04:0,33,494	0/0:13,0:13:30.01:0,30,421	0/0:12,0:12:15.02:0,15,287	1/1:15,0:14:8.70:56,9,0	0/1:15,0:15:16.12:25,0,16	0/0:18,0:18:42.09:0,42,749	1/1:7,9:15:33.04:440,33,0	1/1:7,16:23:37.56:464,38,0	1/1:6,10:16:18.06:280,18,0	1/1:7,14:21:23.91:266,24,0	0/0:17,0:17:32.29:0,32,514	0/0:27,0:27:60.20:0,60,1316	1/1:9,0:9:3.71:29,4,0	0/0:24,0:24:54.06:0,54,790	1/1:7,10:17:36.11:552,36,0	0/0:8,0:8:18.06:0,18,407
chr10	84907475	.	AAC	A	2079.61	PASS	AB=0.995;AC=20;AF=0.357;AN=56;BaseQRankSum=11.903;DP=558;FS=7.259;HRun=0;HaplotypeScore=94.9190;InbreedingCoeff=0.3654;MQ=60.16;MQ0=3;MQRankSum=-3.585;QD=7.56;ReadPosRankSum=-0.024;VQSLOD=2.2127;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:45.54:0,46,601	1/1:11,2:13:19.55:219,20,0	0/1:25,0:14:51.72:52,0,89	0/0:18,0:9:7.81:0,8,95	0/0:26,0:26:72.80:0,73,796	0/0:15,0:15:42.13:0,42,628	1/1:10,0:10:3.23:9,3,0	0/1:21,0:21:99:149,0,171	0/0:29,0:29:49.27:0,49,869	1/1:24,0:24:51.90:332,52,0	1/1:22,1:22:23.38:299,23,0	0/0:21,0:21:63.02:0,63,763	0/0:18,0:18:51.93:0,52,579	0/0:18,0:18:48:0,48,495	0/0:11,0:11:8.82:0,9,302	0/1:12,0:11:1.85:48,0,2	1/1:20,0:19:21.79:141,22,0	0/0:18,0:18:53.08:0,53,611	0/1:27,0:26:99:195,0,224	0/1:25,1:26:99:195,0,180	0/1:18,0:18:94:94,0,119	0/1:17,0:17:85.53:124,0,86	0/0:14,0:14:26.59:0,27,446	0/0:27,0:27:37.91:0,38,937	1/1:7,2:8:23.14:202,23,0	0/0:29,0:29:68.83:0,69,847	0/1:30,0:30:99:211,0,183	0/0:10,0:10:30.08:0,30,404
chr10	84907476	.	AC	A	2780.52	PASS	AB=0.974;AC=19;AF=0.339;AN=56;BaseQRankSum=9.949;DP=571;FS=1.141;HRun=1;HaplotypeScore=87.5037;InbreedingCoeff=0.3918;MQ=60.04;MQ0=3;MQRankSum=-2.178;QD=10.38;ReadPosRankSum=-0.998;VQSLOD=1.1569;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:56.51:0,57,465	1/1:9,4:13:36.13:327,36,0	0/1:22,3:14:77.52:78,0,94	0/0:18,0:9:2.50:0,2,61	0/0:26,0:26:67.95:0,68,684	0/0:15,0:15:42.12:0,42,497	0/0:10,0:10:7.47:0,7,20	0/1:21,1:22:99:100,0,203	0/0:29,0:29:52.39:0,52,697	1/1:18,8:26:65.20:619,65,0	1/1:15,9:23:48.93:562,49,0	0/0:21,0:21:62.77:0,63,600	0/0:19,1:20:31.67:0,32,488	0/0:17,0:17:47.72:0,48,426	0/0:13,0:13:8.59:0,9,255	1/1:10,0:9:11.49:99,11,0	1/1:14,6:19:39.64:392,40,0	0/0:18,0:18:39.89:0,40,442	0/1:27,0:26:99:156,0,205	0/1:28,0:28:99:129,0,222	0/1:19,0:19:59.95:60,0,108	0/1:16,0:16:65.35:113,0,65	0/0:16,0:16:14.45:0,14,349	0/0:27,0:27:40.78:0,41,729	1/1:8,0:7:18.34:154,18,0	0/0:31,0:31:74.29:0,74,777	0/1:29,1:30:99:184,0,162	0/0:11,0:11:29.99:0,30,323
chr10	84907479	.	A	AAC	631.90	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=3.116;DP=599;FS=2.818;HRun=0;HaplotypeScore=116.0833;InbreedingCoeff=0.5368;MQ=61.23;MQ0=3;MQRankSum=-0.025;QD=15.80;ReadPosRankSum=3.014;VQSLOD=3.9305;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,25:31:51.57:724,52,0	0/0:13,0:13:22.18:0,22,220	0/0:23,0:13:5.40:0,5,113	0/0:18,0:10:18.26:0,18,148	0/0:28,0:28:80.14:0,80,966	0/0:16,0:16:42.14:0,42,623	0/1:9,0:9:9.79:10,0,58	0/0:22,0:22:56.92:0,57,620	0/0:29,0:29:77.53:0,78,933	0/0:27,0:27:55.33:0,55,371	0/0:26,0:25:70.14:0,70,507	0/0:25,0:25:65.61:0,66,768	0/0:20,0:20:57.09:0,57,712	0/0:18,0:18:45.07:0,45,506	0/0:13,0:13:37.31:0,37,444	0/0:10,0:9:11.73:0,12,118	0/0:22,0:21:39.86:0,40,320	0/0:19,0:19:50.59:0,51,625	0/0:27,0:26:67.20:0,67,760	0/0:32,0:32:74.95:0,75,818	0/0:24,0:24:47.45:0,47,473	0/0:18,0:18:47.67:0,48,434	0/0:18,0:18:44.27:0,44,514	0/0:27,0:27:73.31:0,73,957	0/0:8,0:7:3.28:0,3,55	0/0:33,0:33:89.39:0,89,1005	0/0:32,0:32:88.61:0,89,837	0/0:11,0:11:33.09:0,33,451
chr10	84907592	.	CAA	C	4769.56	PASS	AB=0.590;AC=25;AF=0.446;AN=56;BaseQRankSum=10.141;DP=586;FS=0.706;HRun=12;HaplotypeScore=86.8762;InbreedingCoeff=0.9206;MQ=70.08;MQ0=0;MQRankSum=-2.216;QD=17.16;ReadPosRankSum=4.055;VQSLOD=4.1157;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:32:62.85:693,63,0	1/1:1,1:5:11.24:66,11,0	0/0:13,0:12:18.36:0,18,252	0/0:16,0:16:20.22:0,20,212	0/0:21,0:23:59.65:0,60,786	0/0:7,0:20:45.05:0,45,440	0/0:25,0:25:69.18:0,69,971	1/1:1,18:21:56.17:524,56,0	0/0:24,0:26:74.69:0,75,995	1/1:7,0:26:54.72:235,55,0	1/1:8,0:17:29.46:125,29,0	0/0:15,0:15:33.10:0,33,464	0/0:16,0:16:42.11:0,42,574	0/0:25,0:25:59.64:0,60,766	0/0:18,0:18:40.36:0,40,548	0/1:7,0:23:44.96:122,0,45	1/1:7,0:24:53.35:225,53,0	0/0:19,0:22:56.14:0,56,733	1/1:4,15:19:47.80:462,48,0	1/1:4,23:27:60.08:609,60,0	1/1:3,13:16:27.05:275,27,0	1/1:5,18:24:29.77:356,30,0	0/0:23,0:24:62.62:0,63,811	0/0:25,0:25:54.15:0,54,748	1/1:0,14:15:41.83:408,42,0	0/0:20,0:22:58.99:0,59,750	1/1:4,25:29:66.11:671,66,0	0/0:17,0:17:51.12:0,51,666
chr10	84907679	.	CA	C	2868.23	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.071;DP=532;FS=0.950;HRun=1;HaplotypeScore=56.1310;InbreedingCoeff=0.9964;MQ=80.87;MQ0=0;MQRankSum=-2.681;QD=35.41;ReadPosRankSum=2.641;VQSLOD=3.7573;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.29:0,90,1414	1/1:0,6:6:15.05:209,15,0	0/0:13,0:13:39.12:0,39,599	0/0:16,0:16:45.07:0,45,600	0/0:12,0:12:36.12:0,36,570	0/0:20,0:20:60.20:0,60,956	0/0:15,0:15:45.15:0,45,716	0/0:21,0:21:63.16:0,63,959	0/0:26,0:26:78.20:0,78,1216	1/1:1,14:15:45.11:607,45,0	1/1:0,16:16:45.10:606,45,0	0/0:11,0:11:33.10:0,33,503	0/0:15,0:15:45.13:0,45,679	0/0:20,0:20:60.20:0,60,939	0/0:19,0:19:54.18:0,54,860	1/1:0,13:13:36.10:503,36,0	1/1:1,16:17:42.14:586,42,0	0/0:29,0:29:87.28:0,87,1356	0/0:24,0:24:69.24:0,69,1102	0/0:30,0:30:81.25:0,81,1244	0/0:28,0:28:78.23:0,78,1197	0/0:24,0:24:60.20:0,60,958	0/0:11,0:11:33.11:0,33,526	0/0:19,0:18:57.19:0,57,900	1/1:0,14:14:39.13:544,39,0	0/0:34,1:35:63.38:0,63,1543	0/0:23,0:23:60.19:0,60,933	0/0:9,0:9:27.07:0,27,400
chr10	84907999	.	CA	C	4022.85	PASS	AB=0.955;AC=30;AF=0.536;AN=56;BaseQRankSum=7.350;DP=506;FS=1.413;HRun=11;HaplotypeScore=76.6431;InbreedingCoeff=0.8273;MQ=58.27;MQ0=16;MQRankSum=-2.902;QD=13.23;ReadPosRankSum=1.650;VQSLOD=3.9515;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,35:39:95.87:786,96,0	1/1:0,5:5:8.98:74,9,0	0/0:20,0:9:17.82:0,18,163	0/0:21,1:12:6.52:0,7,99	0/0:18,0:18:20.73:0,21,311	0/0:17,0:16:11.45:0,11,289	1/1:6,9:14:23.94:195,24,0	1/1:11,17:27:45.39:357,45,0	0/1:9,1:10:6.60:7,0,142	1/1:10,14:24:35.63:292,36,0	1/1:3,19:21:53.92:440,54,0	0/1:11,0:11:0.60:1,0,185	0/0:10,0:8:14.91:0,15,125	0/0:8,0:8:17.70:0,18,147	0/0:16,0:16:42.06:0,42,427	1/1:2,4:6:8.55:73,9,0	1/1:3,9:11:20.97:172,21,0	0/0:29,1:29:42.55:0,43,566	1/1:15,13:25:40.90:321,41,0	1/1:17,12:28:50.51:403,51,0	1/1:6,8:15:15.98:110,16,0	1/1:7,11:18:23.62:196,24,0	0/0:15,0:15:0.96:0,1,189	0/0:13,0:12:23.99:0,24,226	1/1:2,14:16:38.95:320,39,0	0/0:17,0:16:30.08:0,30,320	1/1:7,13:21:34.95:276,35,0	0/0:15,0:11:24.15:0,24,224
chr10	84908601	.	A	AGT	62.51	PASS	AB=1.000;AC=3;AF=0.056;AN=54;BaseQRankSum=1.530;DP=346;FS=1.347;HRun=0;HaplotypeScore=64.2856;InbreedingCoeff=0.2675;MQ=77.07;MQ0=1;MQRankSum=0.046;QD=1.69;ReadPosRankSum=0.837;VQSLOD=1.5648;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,8:17:9.03:144,9,0	0/0:5,0:5:2.65:0,3,20	0/0:33,0:25:30.83:0,31,280	0/0:30,0:19:20.88:0,21,209	0/0:4,0:4:9.01:0,9,87	0/0:19,0:19:14.99:0,15,173	0/1:20,0:20:4.19:4,0,93	0/0:14,0:14:11.98:0,12,111	0/0:23,0:23:1.64:0,2,277	0/0:9,0:9:5.86:0,6,37	0/0:4,0:4:2.84:0,3,14	0/0:8,0:8:15.02:0,15,160	0/0:6,0:6:9.02:0,9,100	0/0:9,0:9:12.02:0,12,135	0/0:15,0:15:27.03:0,27,304	0/0:11,0:13:25.91:0,26,140	0/0:19,0:22:38.73:0,39,217	0/0:10,0:10:17.95:0,18,177	0/0:4,0:4:2.50:0,2,9	./.	0/0:13,0:13:10.77:0,11,115	0/0:5,0:5:2.96:0,3,19	0/0:5,0:5:12.02:0,12,126	0/0:18,0:18:45.05:0,45,508	0/0:16,0:16:19.07:0,19,87	0/0:11,0:11:12.03:0,12,138	0/0:7,0:6:14.97:0,15,154	0/0:2,0:2:3.01:0,3,37
chr10	84908609	.	TGTGTGTGG	T	505.10	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.084;DP=324;FS=7.573;HRun=0;HaplotypeScore=88.3004;InbreedingCoeff=0.5827;MQ=71.90;MQ0=2;MQRankSum=-2.370;QD=38.85;ReadPosRankSum=0.851;VQSLOD=2.5420;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:24.05:0,24,574	0/0:5,0:5:11.01:0,11,148	0/0:34,0:25:53.62:0,54,1862	0/0:25,0:15:29.01:0,29,1089	0/0:4,0:4:9.03:0,9,311	0/0:17,0:17:20.80:0,21,738	0/0:20,0:20:57.18:0,57,1765	0/0:16,0:16:31.07:0,31,553	0/0:20,0:20:52.37:0,52,1600	0/0:7,0:7:20.98:0,21,242	0/0:4,0:4:6.01:0,6,104	0/0:8,0:8:18.05:0,18,640	0/0:4,0:4:9.03:0,9,352	0/0:8,0:8:21.07:0,21,692	0/0:14,0:14:39.09:0,39,1298	0/0:14,0:13:30.10:0,30,730	0/0:22,0:22:60.63:0,61,1161	0/0:11,0:11:33.10:0,33,1019	0/0:4,0:4:9.01:0,9,169	0/0:3,0:3:6.01:0,6,61	0/0:12,0:12:30.10:0,30,862	0/0:6,0:5:9.49:0,9,162	0/0:5,0:5:12.04:0,12,455	0/0:17,0:17:51.18:0,51,1982	1/1:1,12:13:21.07:597,21,0	0/0:6,0:6:15.05:0,15,527	0/0:5,0:4:15.05:0,15,584	0/0:2,0:2:6.02:0,6,256
chr10	84908614	.	GT	G	1181.57	PASS	AB=0.891;AC=19;AF=0.339;AN=56;BaseQRankSum=2.793;DP=338;FS=0.000;HRun=1;HaplotypeScore=57.4053;InbreedingCoeff=0.5200;MQ=71.44;MQ0=2;MQRankSum=-2.898;QD=9.68;ReadPosRankSum=-1.575;VQSLOD=0.5065;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:17.83:0,18,129	0/1:5,1:6:7.53:34,0,8	0/0:33,0:24:63.78:0,64,627	0/0:25,0:14:28.17:0,28,333	0/0:7,0:7:8.38:0,8,88	0/0:13,0:13:15.91:0,16,223	0/0:19,0:19:54.01:0,54,617	0/1:5,10:15:32.27:32,0,110	0/0:18,0:18:41.33:0,41,446	1/1:0,2:2:6.01:66,6,0	1/1:1,3:4:3.01:42,3,0	0/0:6,0:6:15:0,15,182	0/0:9,0:9:8.93:0,9,106	0/1:7,0:7:4.63:5,0,170	0/0:12,0:12:30.05:0,30,369	1/1:3,15:17:29.63:318,30,0	1/1:22,6:27:62.90:575,63,0	0/0:11,0:11:26.93:0,27,289	0/1:4,0:4:5.59:57,0,6	1/1:0,4:4:5.93:39,6,0	0/0:15,0:15:23.77:0,24,192	1/1:8,0:7:9.51:70,10,0	0/0:4,0:4:4.84:0,5,80	0/0:21,0:21:52.80:0,53,612	1/1:14,0:14:15.03:56,15,0	0/0:6,0:6:18.03:0,18,214	0/1:12,0:11:71.79:72,0,138	0/0:2,0:2:6.02:0,6,75
chr10	84909050	.	TC	T	729.76	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.046;DP=535;FS=0.000;HRun=5;HaplotypeScore=92.5699;InbreedingCoeff=0.9886;MQ=77.54;MQ0=0;MQRankSum=-2.939;QD=28.07;ReadPosRankSum=0.250;VQSLOD=3.4357;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:26:66.14:825,66,0	0/0:8,0:8:24.08:0,24,359	0/0:17,0:17:45.06:0,45,619	0/0:22,0:20:60.13:0,60,834	0/0:11,0:11:33.11:0,33,494	0/0:11,0:11:30.06:0,30,416	0/0:22,0:22:57.16:0,57,783	0/0:21,0:21:63.19:0,63,903	0/0:27,0:27:78.12:0,78,1069	0/0:15,0:15:42.14:0,42,619	0/0:16,0:16:45.15:0,45,665	0/0:17,0:17:51.17:0,51,754	0/0:23,0:23:63.17:0,63,914	0/0:18,0:18:48.01:0,48,634	0/0:32,0:32:87.20:0,87,1249	0/0:20,0:20:60.16:0,60,870	0/0:29,0:29:75.25:0,75,1111	0/0:23,0:23:66.21:0,66,963	0/0:16,0:16:48.14:0,48,686	0/0:12,0:12:24.02:0,24,296	0/0:27,0:27:75.25:0,75,1120	0/0:14,0:14:39.11:0,39,537	0/0:8,0:8:23.11:0,23,319	0/0:32,0:32:87.28:0,87,1272	0/0:20,0:20:57.07:0,57,792	0/0:26,0:26:78.25:0,78,1127	0/0:14,0:14:42.13:0,42,607	0/0:8,0:8:21.07:0,21,312
chr10	84909177	.	AC	A	6224.20	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=17.996;DP=646;FS=12.360;HRun=4;HaplotypeScore=99.1641;InbreedingCoeff=0.9995;MQ=85.42;MQ0=0;MQRankSum=-3.757;QD=31.76;ReadPosRankSum=3.385;VQSLOD=4.1396;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,42:46:99:1331,111,0	1/1:2,11:13:33.10:395,33,0	0/0:34,0:34:99:0,99,1377	0/0:24,0:24:69.23:0,69,966	0/0:21,0:21:60.03:0,60,747	0/0:23,0:23:63.21:0,63,882	1/1:2,26:28:72.22:864,72,0	0/0:22,0:22:63.21:0,63,882	0/0:29,0:29:84.24:0,84,1124	1/1:0,19:19:57.17:684,57,0	1/1:2,17:19:48.15:575,48,0	0/0:18,0:18:54.18:0,54,756	0/0:28,0:28:81.27:0,81,1133	0/0:12,0:12:33.10:0,33,443	0/0:27,0:27:78.21:0,78,1054	1/1:0,19:19:51.16:612,51,0	1/1:2,30:32:87.27:1044,87,0	0/0:16,0:16:42.14:0,42,588	0/0:8,0:8:24.06:0,24,305	0/0:21,0:21:54.18:0,54,755	0/0:37,0:37:99:0,108,1511	0/0:14,0:14:36.12:0,36,503	0/0:19,0:19:54.18:0,54,751	0/0:36,0:36:99:0,102,1428	1/1:0,20:20:60.18:719,60,0	0/0:27,1:28:39.18:0,39,921	0/0:19,0:19:54.18:0,54,755	0/0:14,0:14:42.14:0,42,586
chr10	84909337	.	GTA	G	1001.31	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=6.865;DP=581;FS=12.873;HRun=0;HaplotypeScore=101.9387;InbreedingCoeff=0.0951;MQ=68.34;MQ0=10;MQRankSum=-0.672;QD=3.99;ReadPosRankSum=-2.155;VQSLOD=1.1906;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:21.52:205,22,0	0/1:6,0:6:14.63:24,0,15	0/0:21,0:10:13.98:0,14,116	0/1:23,0:12:4.18:4,0,60	0/0:15,0:15:12.51:0,13,264	0/0:21,0:21:42.12:0,42,585	1/1:3,19:22:20.98:242,21,0	0/0:24,0:23:62.70:0,63,523	0/0:27,0:27:69.49:0,69,802	0/1:25,0:25:21.10:359,0,21	0/0:13,0:11:4.87:0,5,17	0/0:20,0:20:59.99:0,60,694	0/0:22,0:22:34.11:0,34,599	0/0:24,0:24:59.28:0,59,732	0/0:21,0:21:49.85:0,50,704	0/1:23,0:23:63.72:71,0,64	0/1:24,0:24:27.48:192,0,27	0/0:9,0:9:18.22:0,18,313	0/0:13,0:11:1.97:0,2,148	0/1:21,0:21:38.03:38,0,228	0/1:46,0:44:6.76:7,0,328	0/1:22,0:20:4.87:5,0,122	0/0:18,0:17:30.04:0,30,433	0/0:35,0:35:81.40:0,81,1030	0/0:13,0:11:2.37:0,2,8	0/0:25,0:25:17.93:0,18,712	0/1:17,0:17:11.27:11,0,166	0/0:8,0:8:20.97:0,21,258
chr10	84909338	.	T	TAC	837.28	PASS	AB=0.838;AC=12;AF=0.214;AN=56;BaseQRankSum=5.948;DP=591;FS=4.294;HRun=0;HaplotypeScore=116.2827;InbreedingCoeff=0.6266;MQ=65.81;MQ0=10;MQRankSum=-1.104;QD=6.49;ReadPosRankSum=-0.702;VQSLOD=3.0047;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:23:4.58:47,5,0	0/1:4,2:6:17.39:39,0,17	0/0:20,0:8:11.52:0,12,168	0/0:22,0:11:6.18:0,6,125	0/0:15,0:15:33.11:0,33,483	0/0:24,0:24:62.22:0,62,862	0/0:21,0:22:16.52:0,17,73	0/0:24,0:23:63.19:0,63,856	0/0:28,0:28:67.47:0,67,983	0/1:23,1:25:33.35:187,0,33	1/1:8,5:12:6.02:82,6,0	0/0:22,0:22:58.05:0,58,849	0/0:21,0:21:47.72:0,48,659	0/0:24,0:24:67.78:0,68,972	0/0:21,0:21:60.19:0,60,872	1/1:15,8:24:28.80:331,29,0	1/1:18,6:24:4.01:262,4,0	0/0:9,0:9:27.09:0,27,391	0/0:12,0:10:30.09:0,30,431	0/0:23,0:23:57.61:0,58,737	0/0:47,0:45:75.23:0,75,1052	0/0:23,0:21:27.02:0,27,376	0/0:18,0:17:30.56:0,31,433	0/0:36,0:36:99:0,102,1477	1/1:4,1:11:3.01:45,3,0	0/0:26,0:26:46.34:0,46,918	0/0:17,0:17:45.60:0,46,591	0/0:8,0:8:21.07:0,21,303
chr10	84909340	.	TAC	T	1054.15	PASS	AB=0.934;AC=18;AF=0.321;AN=56;BaseQRankSum=2.781;DP=615;FS=12.630;HRun=0;HaplotypeScore=109.8223;InbreedingCoeff=0.2124;MQ=60.80;MQ0=12;MQRankSum=0.231;QD=3.39;ReadPosRankSum=-0.994;VQSLOD=1.5420;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:6.90:0,7,52	0/0:7,0:7:9.01:0,9,96	0/0:20,0:8:2.84:0,3,14	0/0:20,0:8:2.88:0,3,15	0/1:11,2:13:51.47:51,0,120	0/1:21,3:24:34.32:34,0,262	1/1:21,1:22:17.77:131,18,0	0/1:28,0:27:13.73:53,0,14	0/0:27,0:28:29.68:0,30,396	0/0:24,0:24:24.04:0,24,283	0/0:16,0:13:5.99:0,6,52	0/0:22,0:22:36.09:0,36,495	0/0:20,1:21:5.91:0,6,466	0/0:27,0:28:2.46:0,2,318	0/1:22,0:22:21.23:21,0,358	0/0:23,0:23:38.94:0,39,373	0/0:23,0:23:32.99:0,33,319	0/1:12,0:12:9.55:10,0,223	1/1:10,2:11:10.28:124,10,0	0/1:19,6:25:18.30:230,0,18	1/1:29,20:46:23.83:266,24,0	1/1:11,10:20:8.64:81,9,0	0/0:18,1:18:21.05:0,21,295	0/1:36,2:38:21.39:21,0,514	0/0:17,0:15:6:0,6,52	0/1:24,1:26:16.65:17,0,295	1/1:11,3:17:20.01:193,20,0	0/0:8,0:8:9.03:0,9,136
chr10	84909403	.	CATG	C	1488.41	PASS	AB=0.828;AC=16;AF=0.308;AN=52;BaseQRankSum=8.635;DP=594;FS=9.478;HRun=0;HaplotypeScore=123.2226;InbreedingCoeff=0.4368;MQ=59.00;MQ0=12;MQRankSum=-1.116;QD=8.86;ReadPosRankSum=0.846;VQSLOD=2.7308;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:17:2.76:20,3,0	1/1:0,5:5:9.03:119,9,0	./.	0/0:47,0:28:0:0,0,0	0/0:16,0:16:24.07:0,24,427	0/0:22,1:24:17.69:0,18,977	0/0:25,0:27:0.98:0,1,34	./.	0/0:31,1:32:35.74:0,36,1325	1/1:6,7:13:21.07:277,21,0	1/1:6,5:11:15.05:198,15,0	0/0:25,0:25:45.14:0,45,830	0/0:11,0:11:17.93:0,18,345	0/0:22,0:22:45.12:0,45,796	0/0:27,1:28:14.66:0,15,896	0/1:11,18:28:15.47:453,0,15	1/1:8,13:22:39.09:495,39,0	0/0:20,0:20:27.05:0,27,471	0/1:17,0:19:29.74:30,0,30	0/0:4,0:10:8.08:0,8,35	0/0:32,0:34:1.41:0,1,18	0/1:6,0:6:0:1,0,0	0/0:19,0:19:27.07:0,27,450	0/0:37,0:37:69.24:0,69,1311	0/1:4,0:4:0:0,0,0	0/1:23,1:24:30.60:31,0,727	0/1:4,0:12:25.45:25,0,29	0/0:10,0:10:18.06:0,18,345
chr10	84909572	.	AACTACTACT	A	1236.99	PASS	AB=0.882;AC=15;AF=0.268;AN=56;BaseQRankSum=4.940;DP=709;FS=3.459;HRun=0;HaplotypeScore=174.8535;InbreedingCoeff=0.5461;MQ=52.76;MQ0=28;MQRankSum=-2.823;QD=5.43;ReadPosRankSum=1.569;VQSLOD=2.6908;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:19:29.38:29,0,44	1/1:6,0:6:6.01:64,6,0	0/0:18,0:14:6.45:0,6,52	0/1:20,0:13:0.88:1,0,14	0/0:22,0:21:42:0,42,630	0/0:41,0:38:84.24:0,84,1975	0/1:22,0:19:3.33:39,0,3	0/1:45,0:34:11.14:11,0,180	0/0:32,0:30:63.21:0,63,1744	0/1:16,17:32:67.29:411,0,67	1/1:12,0:11:12.39:113,12,0	0/0:20,0:17:39.13:0,39,983	0/0:31,0:30:66.19:0,66,1886	0/0:28,0:28:48.13:0,48,1160	0/0:35,0:31:66.16:0,66,1682	1/1:28,0:26:34:446,34,0	1/1:22,0:16:6.01:64,6,0	0/0:15,0:13:27.08:0,27,805	0/0:15,0:14:12.43:0,12,139	0/0:28,0:26:26.69:0,27,228	0/0:36,0:33:16.22:0,16,169	0/0:34,0:34:27.57:0,28,251	0/0:25,0:25:33.04:0,33,565	0/0:39,0:37:49.72:0,50,1413	1/1:16,0:16:23.98:232,24,0	0/0:27,0:24:48.15:0,48,1221	0/0:23,0:19:15.06:0,15,177	0/0:11,0:11:21.07:0,21,431
chr10	84909593	.	T	TACA	2576.40	PASS	AB=0.600;AC=11;AF=0.196;AN=56;BaseQRankSum=1.575;DP=735;FS=4.918;HRun=0;HaplotypeScore=99.0790;InbreedingCoeff=0.7583;MQ=45.38;MQ0=78;MQRankSum=-4.771;QD=12.21;ReadPosRankSum=-0.742;VQSLOD=3.0914;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:17:13.63:0,14,94	0/0:3,0:2:5.92:0,6,40	0/0:10,0:4:6.45:0,6,52	0/0:12,0:5:8.96:0,9,72	0/0:25,0:24:56.96:0,57,642	0/0:38,0:35:96.21:0,96,1392	0/0:26,0:16:24.66:0,25,181	1/1:55,0:21:17.06:402,17,0	0/0:34,0:28:78.16:0,78,1151	0/0:28,0:23:63.73:0,64,577	0/0:9,0:8:14.87:0,15,149	0/0:22,0:18:54.10:0,54,767	0/0:31,0:30:81.15:0,81,1144	0/0:23,0:23:60.12:0,60,813	0/0:42,0:36:99:0,99,1260	0/0:30,0:26:50.69:0,51,414	0/0:18,0:11:8.94:0,9,67	0/0:19,0:14:33.02:0,33,472	1/1:11,2:9:21:382,21,0	1/1:25,6:24:50.99:852,51,0	1/1:20,34:42:1.20:273,1,0	1/1:1,25:27:23.87:583,24,0	0/0:24,0:24:28.97:0,29,530	0/0:42,0:39:86.85:0,87,1037	0/0:15,0:14:19.71:0,20,198	0/0:31,0:27:75.13:0,75,969	0/1:10,19:25:63.03:252,0,63	0/0:10,0:9:21.07:0,21,355
chr10	84909608	.	TACA	T	473.97	PASS	AB=0.987;AC=17;AF=0.327;AN=52;BaseQRankSum=7.673;DP=748;FS=4.264;HRun=0;HaplotypeScore=100.9999;InbreedingCoeff=-0.0900;MQ=42.41;MQ0=105;MQRankSum=-5.328;QD=1.27;ReadPosRankSum=-1.678;VQSLOD=1.5949;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:14:0.05:19,0,0	1/1:3,0:2:2.94:18,3,0	./.	./.	0/0:22,0:21:47.73:0,48,498	0/0:40,0:35:67.89:0,68,1064	0/0:29,0:18:26.24:0,26,156	0/1:55,0:13:8.09:8,0,146	0/0:40,0:34:96.10:0,96,1327	0/1:24,0:19:61.62:137,0,62	0/1:7,0:6:23.63:24,0,24	0/0:25,0:21:23.22:0,23,722	0/0:32,0:31:67.31:0,67,1190	0/0:27,0:26:37.18:0,37,852	0/0:44,0:36:99:0,102,1320	0/1:26,0:21:39.92:146,0,40	1/1:19,0:10:2.94:18,3,0	0/0:21,0:16:41.70:0,42,571	0/1:19,0:11:29.27:29,0,115	0/1:30,2:23:73.02:85,0,73	0/1:57,0:43:10.87:11,0,70	0/1:26,0:25:11.38:11,0,39	0/1:20,0:20:19.68:20,0,248	0/0:38,0:34:69.26:0,69,1009	0/1:18,2:18:82.47:82,0,177	0/0:29,0:24:50.28:0,50,803	0/1:31,0:25:17.52:18,0,67	0/0:14,0:13:32.98:0,33,329
chr10	84909635	.	TACA	T	34.96	PASS	AB=0.983;AC=6;AF=0.111;AN=54;BaseQRankSum=5.855;DP=794;FS=1.764;HRun=0;HaplotypeScore=102.1462;InbreedingCoeff=0.3012;MQ=38.87;MQ0=145;MQRankSum=-3.700;QD=0.31;ReadPosRankSum=-1.979;VQSLOD=1.8749;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:7:5.63:37,6,0	0/0:7,0:6:2.99:0,3,26	1/1:29,0:2:1.03:4,1,0	./.	0/0:23,0:21:46.88:0,47,561	0/0:36,0:26:56.20:0,56,745	0/0:28,0:12:21.82:0,22,150	0/0:51,0:12:29.85:0,30,227	0/0:44,0:34:95.54:0,96,1648	0/0:15,0:10:14.80:0,15,119	0/0:12,0:7:8.88:0,9,63	0/0:32,0:26:67.38:0,67,975	0/0:28,0:27:56.43:0,56,1134	0/0:29,0:26:53.87:0,54,971	0/0:46,0:34:97.06:0,97,1775	0/0:25,0:17:26.62:0,27,221	0/0:17,6:10:2.90:0,3,16	0/0:28,0:23:36.29:0,36,732	0/0:18,0:9:23.45:0,23,325	0/0:25,0:14:17.79:0,18,188	0/0:52,0:35:4.69:0,5,102	0/1:27,0:19:30.21:59,0,30	0/0:22,0:20:5.41:0,5,339	0/0:43,1:40:80.09:0,80,1079	0/0:24,0:17:9.10:0,9,595	0/0:35,0:28:64.50:0,65,995	0/1:27,1:20:41.70:42,0,89	0/0:14,0:13:23.99:0,24,360
chr10	84909809	.	TACA	T	40.71	PASS	AB=0.950;AC=11;AF=0.196;AN=56;BaseQRankSum=6.137;DP=1115;FS=5.312;HRun=0;HaplotypeScore=119.7479;InbreedingCoeff=0.0342;MQ=29.64;MQ0=282;MQRankSum=-5.892;QD=0.18;ReadPosRankSum=-3.374;VQSLOD=1.2458;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:7:4.20:25,4,0	0/1:10,3:8:11.06:11,0,14	1/1:34,0:2:2.04:6,2,0	0/0:37,0:2:5.92:0,6,39	0/0:34,0:28:32.67:0,33,302	0/0:59,0:37:25.67:0,26,670	0/1:25,0:8:11.34:11,0,14	0/0:99,0:16:44.96:0,45,381	0/0:72,1:49:59.74:0,60,1230	0/1:34,1:17:27.81:28,0,268	0/0:7,0:6:11.92:0,12,168	0/1:49,1:32:13.47:13,0,838	0/0:42,0:31:38.65:0,39,671	0/0:64,0:48:76.40:0,76,894	0/0:79,0:46:67.96:0,68,883	0/0:31,0:19:18.84:0,19,271	0/0:25,0:13:5.92:0,6,42	0/0:52,0:32:45.11:0,45,828	0/1:16,0:3:12.12:12,0,26	0/1:14,1:10:34.69:35,0,89	0/0:67,0:25:0.81:0,1,65	0/1:18,1:13:33.87:35,0,34	0/0:41,0:35:83.05:0,83,983	0/0:57,1:34:24.54:0,25,633	0/0:32,0:19:5.07:0,5,197	0/0:49,0:29:49.91:0,50,883	0/0:14,0:6:2.94:0,3,18	0/0:25,0:14:17.87:0,18,303
chr10	84909812	.	AACTACTACT	A	592.73	PASS	AB=0.980;AC=18;AF=0.346;AN=52;BaseQRankSum=-3.279;DP=1112;FS=0.000;HRun=0;HaplotypeScore=156.9036;InbreedingCoeff=-0.3584;MQ=29.55;MQ0=282;MQRankSum=1.000;QD=0.75;ReadPosRankSum=-3.898;VQSLOD=1.1755;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:8:8.93:43,9,0	0/1:15,0:10:5.93:6,0,31	./.	./.	0/1:19,16:29:0.19:0,0,80	0/1:61,0:37:53.74:54,0,182	0/0:24,0:7:2.94:0,3,18	0/0:79,0:16:2.99:0,3,24	0/1:72,0:48:29.56:30,0,603	0/1:35,0:17:3.85:4,0,314	0/0:9,0:8:11.87:0,12,96	0/1:50,0:31:63.53:64,0,371	0/1:41,0:30:26.44:26,0,286	0/1:63,0:48:84.84:85,0,471	0/1:78,0:43:34.28:34,0,299	0/1:33,0:21:10.90:11,0,131	0/0:25,0:13:5.81:0,6,79	0/1:52,0:32:47.73:48,0,386	0/0:14,0:4:11.37:0,11,108	0/0:20,0:12:10.28:0,10,186	0/1:71,0:25:33.54:34,0,97	0/0:22,0:14:8.36:0,8,78	0/1:44,0:36:99:209,0,253	0/1:58,0:34:1.89:2,0,256	0/0:37,0:21:29.56:0,30,395	0/1:47,0:25:79.39:79,0,393	0/1:15,0:7:8.97:9,0,44	0/0:26,0:15:11.44:0,11,149
chr10	84910077	.	ACTG	A	112.26	PASS	AB=1.000;AC=21;AF=0.808;AN=26;BaseQRankSum=0.591;DP=89;FS=5.842;HRun=0;HaplotypeScore=23.7846;InbreedingCoeff=0.2356;MQ=33.11;MQ0=6;MQRankSum=-1.084;QD=2.34;ReadPosRankSum=1.183;VQSLOD=0.0003;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/1:14,0:8:0.03:0,0,47	./.	0/0:5,1:3:0:0,0,0	./.	./.	1/1:5,3:6:5.95:52,6,0	1/1:1,0:1:2.22:7,2,0	./.	./.	1/1:1,1:2:2.94:18,3,0	./.	1/1:1,2:2:2.94:18,3,0	1/1:1,0:1:2.98:22,3,0	1/1:4,0:2:2.94:18,3,0	1/1:6,0:3:2.90:16,3,0	./.	1/1:4,0:4:1.25:3,1,0	./.	0/0:2,0:2:2.88:0,3,15	1/1:3,0:3:1.55:4,2,0	./.	./.	1/1:0,1:1:3.01:39,3,0	./.	./.
chr10	84910086	.	AG	A	475.80	PASS	AB=0.857;AC=26;AF=0.929;AN=28;BaseQRankSum=-0.355;DP=81;FS=2.667;HRun=1;HaplotypeScore=20.1542;InbreedingCoeff=-0.1218;MQ=34.49;MQ0=4;MQRankSum=-2.725;QD=8.06;ReadPosRankSum=1.303;VQSLOD=0.9935;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/1:14,0:7:48.34:48,0,94	./.	1/1:0,6:3:3.01:42,3,0	./.	./.	1/1:0,7:6:6.01:68,6,0	1/1:0,1:1:3.01:42,3,0	./.	./.	1/1:0,3:3:3.01:42,3,0	./.	1/1:0,3:2:3.01:42,3,0	1/1:1,1:1:3.01:39,3,0	1/1:1,2:2:3.01:42,3,0	1/1:1,5:3:3.01:35,3,0	./.	1/1:0,4:4:3.01:42,3,0	./.	1/1:0,2:2:3.01:42,3,0	1/1:0,1:1:3.01:42,3,0	0/1:3,2:3:0:0,0,0	./.	1/1:0,1:1:3.01:30,3,0	./.	./.
chr10	84910101	.	AACGT	A	260.64	PASS	AB=1.000;AC=24;AF=0.857;AN=28;BaseQRankSum=-1.396;DP=132;FS=2.722;HRun=0;HaplotypeScore=34.4887;InbreedingCoeff=0.2082;MQ=37.52;MQ0=2;MQRankSum=-0.465;QD=3.00;ReadPosRankSum=-0.465;VQSLOD=1.2042;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	1/1:3,0:1:0.47:1,0,0	0/1:11,0:6:9.02:9,0,24	./.	1/1:6,3:6:5.05:62,5,0	./.	./.	1/1:8,3:8:5.65:30,6,0	0/1:5,0:4:0.07:0,0,12	./.	./.	1/1:8,1:8:5.81:50,6,0	./.	1/1:5,3:7:5.61:48,6,0	1/1:5,0:4:9.14:32,9,0	1/1:2,1:2:5.87:35,6,0	1/1:5,1:3:1.55:4,2,0	./.	1/1:7,0:7:5.09:20,5,0	./.	./.	1/1:5,1:5:1.82:5,2,0	0/0:4,1:4:0:0,0,0	./.	1/1:4,0:2:5.61:50,6,0	./.	./.
chr10	84910103	.	CG	C	713.85	PASS	AB=0.917;AC=23;AF=0.821;AN=28;BaseQRankSum=0.100;DP=133;FS=0.000;HRun=1;HaplotypeScore=30.5066;InbreedingCoeff=0.1576;MQ=37.40;MQ0=2;MQRankSum=-2.706;QD=8.50;ReadPosRankSum=0.702;VQSLOD=0.7525;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:4,0:1:2.60:0,3,10	0/1:9,1:6:12.93:13,0,32	./.	1/1:3,6:6:5.69:49,6,0	./.	./.	1/1:3,8:8:6.02:84,6,0	1/1:0,5:4:10.28:129,10,0	./.	./.	1/1:1,8:8:5.93:58,6,0	./.	1/1:3,5:7:6.63:53,7,0	1/1:0,5:4:12.03:138,12,0	1/1:1,2:2:3.01:42,3,0	1/1:2,4:3:3.01:42,3,0	./.	1/1:0,7:7:6.90:73,7,0	./.	./.	1/1:1,5:5:3.01:42,3,0	0/0:3,2:4:0:0,0,0	./.	1/1:0,4:2:6.02:81,6,0	./.	./.
chr10	84910173	.	CG	C	668.40	PASS	AC=24;AF=0.857;AN=28;BaseQRankSum=-0.130;DP=120;FS=8.846;HRun=1;HaplotypeScore=21.6830;InbreedingCoeff=0.3361;MQ=43.99;MQ0=7;MQRankSum=0.586;QD=14.22;ReadPosRankSum=-0.130;VQSLOD=1.8033;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:2:3.01:41,3,0	./.	0/0:15,0:3:5.98:0,6,63	0/0:23,3:4:7.99:0,8,56	./.	1/1:0,3:3:3:29,3,0	./.	./.	1/1:0,4:2:3.01:42,3,0	1/1:1,3:4:9.03:122,9,0	1/1:0,3:2:3.01:41,3,0	./.	1/1:0,7:6:3.01:46,3,0	./.	1/1:0,5:5:8.39:98,8,0	1/1:0,4:3:9.03:123,9,0	./.	1/1:0,2:1:3.01:44,3,0	./.	1/1:1,4:3:6.02:84,6,0	./.	./.	./.	./.	1/1:0,1:1:2.80:13,3,0	1/1:0,5:2:6.02:84,6,0	./.	./.
chr10	84910344	.	CTAG	C	1909.20	PASS	AB=1.000;AC=50;AF=0.926;AN=54;BaseQRankSum=-1.363;DP=383;FS=7.696;HRun=0;HaplotypeScore=74.3974;InbreedingCoeff=0.2376;MQ=37.65;MQ0=31;MQRankSum=1.016;QD=5.06;ReadPosRankSum=-1.999;VQSLOD=0.8787;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:5:2.90:16,3,0	1/1:7,0:5:8.73:52,9,0	1/1:34,0:5:1.51:5,2,0	0/1:38,0:9:5.04:5,0,35	1/1:6,0:5:8.99:74,9,0	1/1:16,0:13:26.64:194,27,0	1/1:2,0:2:0.47:1,0,0	0/1:16,0:13:11.81:29,0,12	1/1:25,0:18:34.96:231,35,0	1/1:15,0:14:8.50:77,9,0	1/1:14,0:14:14.46:81,14,0	1/1:17,0:15:10.97:84,11,0	1/1:8,0:7:10.24:74,10,0	1/1:21,0:15:20.21:138,20,0	1/1:19,0:17:23.71:166,24,0	1/1:9,0:7:2.84:14,3,0	0/0:2,0:2:1.25:0,1,3	1/1:9,0:7:11.81:80,12,0	1/1:3,1:2:2.51:7,3,0	1/1:12,2:12:16.43:100,16,0	./.	1/1:9,0:8:6.10:32,6,0	1/1:20,0:18:21.07:136,21,0	1/1:18,0:13:19.69:152,20,0	1/1:15,0:11:11.47:67,11,0	1/1:12,0:10:11.20:96,11,0	1/1:11,3:10:12.51:56,13,0	1/1:7,0:7:5.94:42,6,0
chr10	84910369	.	A	AACT	1309.81	PASS	AB=0.977;AC=14;AF=0.259;AN=54;BaseQRankSum=0.552;DP=638;FS=24.483;HRun=0;HaplotypeScore=127.5142;InbreedingCoeff=0.3631;MQ=36.01;MQ0=32;MQRankSum=-3.277;QD=5.77;ReadPosRankSum=-0.652;VQSLOD=1.2201;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:10:4.78:0,5,25	0/0:9,0:7:5.63:0,6,26	./.	0/0:26,0:6:2.94:0,3,18	0/0:21,0:20:21.92:0,22,276	0/0:27,0:22:35.91:0,36,401	0/0:9,0:8:5.54:0,6,69	0/1:26,0:22:0.54:362,0,1	0/0:35,0:27:42.72:0,43,446	0/1:34,0:30:99:137,0,489	1/1:19,0:19:10.59:93,11,0	0/0:33,0:29:48.22:0,48,467	0/0:19,0:17:27.07:0,27,345	0/0:31,0:24:42:0,42,526	0/0:29,0:27:38.90:0,39,413	1/1:18,0:12:1.24:3,1,0	0/0:3,0:3:2.74:0,3,12	0/0:12,0:11:27.05:0,27,344	1/1:7,0:5:12.04:184,12,0	0/1:36,3:36:99:412,0,151	0/1:11,0:6:0:0,0,0	0/1:27,2:25:24.54:25,0,98	0/0:35,0:32:50.51:0,51,501	0/0:32,0:24:37.83:0,38,548	0/1:22,0:20:5.30:5,0,75	0/0:34,0:29:84.18:0,84,1066	1/1:16,4:15:3.87:235,4,0	0/0:17,0:16:36.12:0,36,501
chr10	84910405	.	TACA	T	117.80	PASS	AB=0.972;AC=8;AF=0.143;AN=56;BaseQRankSum=7.044;DP=831;FS=30.750;HRun=0;HaplotypeScore=161.6031;InbreedingCoeff=0.1038;MQ=38.95;MQ0=43;MQRankSum=-6.484;QD=0.79;ReadPosRankSum=-0.485;VQSLOD=0.9435;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:12:5.95:0,6,70	0/0:12,0:11:2.24:0,2,116	0/0:47,0:3:8.98:0,9,116	0/1:20,0:2:6.29:6,0,17	0/0:39,0:37:54.27:0,54,1103	0/0:39,0:32:69.10:0,69,1185	1/1:22,0:19:11.67:82,12,0	0/0:30,0:24:66.12:0,66,1146	0/0:37,0:31:69.14:0,69,1299	0/0:45,0:40:87.19:0,87,1139	0/1:23,1:24:12.39:12,0,37	0/0:40,0:36:74.62:0,75,1345	0/0:23,0:22:42.06:0,42,811	0/0:29,0:25:54.17:0,54,1076	0/0:30,0:28:45.01:0,45,842	0/1:23,1:17:55.81:56,0,141	0/1:5,0:3:7.09:7,0,29	0/0:20,0:19:54.10:0,54,979	0/0:10,0:8:23.78:0,24,323	0/0:53,0:50:68.58:0,69,980	0/0:26,0:17:8.89:0,9,84	0/0:41,0:37:26.25:0,26,441	0/0:35,0:34:71.88:0,72,1321	0/0:38,0:31:64.34:0,64,1229	0/1:28,3:26:46.20:76,0,46	0/0:51,0:44:99:0,105,2119	0/1:24,0:19:5.67:6,0,346	0/0:18,0:17:45.04:0,45,865
chr10	84910423	.	TACA	T	246.54	PASS	AB=0.981;AC=9;AF=0.161;AN=56;BaseQRankSum=7.404;DP=861;FS=39.834;HRun=0;HaplotypeScore=168.1127;InbreedingCoeff=-0.0142;MQ=41.07;MQ0=43;MQRankSum=-5.470;QD=1.26;ReadPosRankSum=0.184;VQSLOD=1.3579;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,2:12:8.78:0,9,52	0/1:10,0:9:37:37,0,77	0/0:39,0:2:6.01:0,6,94	0/0:17,0:1:1.55:0,2,4	0/0:42,0:40:43.90:0,44,1269	0/0:36,0:33:70.22:0,70,1165	0/0:28,0:25:5.83:0,6,37	0/0:30,0:27:38.69:0,39,362	0/0:43,0:39:95.76:0,96,1392	0/0:39,0:35:16.10:0,16,300	0/1:18,0:18:7.38:7,0,15	0/0:39,0:37:60.78:0,61,1304	0/0:27,0:26:44.27:0,44,828	0/0:31,0:30:63.72:0,64,921	0/0:27,0:26:41.97:0,42,708	0/1:24,0:18:16.36:16,0,135	0/1:6,0:4:6.50:6,0,30	0/0:22,0:21:57.13:0,57,1077	0/1:19,0:16:31.48:31,0,45	0/0:56,0:53:12.13:0,12,332	1/1:36,0:27:1.49:6,1,0	0/1:43,0:40:45.77:46,0,125	0/0:33,0:33:58.02:0,58,1163	0/0:42,0:36:79.26:0,79,1440	0/1:34,6:33:26.10:223,0,26	0/0:50,0:46:48.07:0,48,1456	0/0:28,0:23:20.92:0,21,192	0/0:17,1:17:45.07:0,45,932
chr10	84910453	.	AACTACT	A	99.87	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=5.942;DP=783;FS=20.679;HRun=0;HaplotypeScore=163.4913;InbreedingCoeff=0.4689;MQ=44.42;MQ0=29;MQRankSum=-5.033;QD=1.28;ReadPosRankSum=-0.361;VQSLOD=1.0382;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,16:22:9:127,9,0	0/1:12,0:10:1.23:1,0,70	0/0:21,0:3:9.03:0,9,153	0/0:23,0:6:17.93:0,18,271	0/0:40,0:39:65.81:0,66,1844	0/0:29,0:29:54.19:0,54,1544	0/0:32,0:31:18.06:0,18,270	0/0:26,0:23:39.56:0,40,647	0/0:40,0:37:63.20:0,63,1816	0/0:29,0:27:27.71:0,28,221	0/0:21,0:21:0.45:0,0,38	0/0:32,0:31:36.59:0,37,974	0/0:26,0:26:40.91:0,41,1058	0/0:28,0:27:51.10:0,51,1266	0/0:25,0:24:33.04:0,33,780	1/1:27,0:20:1.79:58,2,0	0/1:17,0:15:23.39:23,0,58	0/0:19,0:18:45.13:0,45,1211	0/0:19,0:15:27.08:0,27,608	0/0:41,0:40:38.97:0,39,661	0/0:40,0:35:38.62:0,39,742	0/0:38,0:38:35.98:0,36,547	0/0:25,0:25:27.09:0,27,714	0/0:32,0:34:48.07:0,48,1396	0/0:34,0:32:25.77:0,26,324	0/0:39,0:39:60.07:0,60,1452	0/0:20,0:19:30.10:0,30,573	0/0:18,0:17:18.06:0,18,493
chr10	84910471	.	T	TACA	2294	PASS	AB=0.813;AC=12;AF=0.214;AN=56;BaseQRankSum=4.522;DP=730;FS=2.366;HRun=0;HaplotypeScore=119.2040;InbreedingCoeff=0.8158;MQ=50.62;MQ0=18;MQRankSum=-5.306;QD=13.42;ReadPosRankSum=-1.874;VQSLOD=3.3706;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:3.16:3,0,66	1/1:9,1:9:5.06:355,5,0	0/0:23,0:12:34.87:0,35,376	0/0:21,0:12:33.07:0,33,414	0/0:34,0:32:77.78:0,78,1143	0/0:26,0:25:60.08:0,60,926	1/1:29,0:29:11.35:135,11,0	0/0:33,0:31:41.93:0,42,813	0/0:34,0:31:72.12:0,72,1104	1/1:8,27:36:43.78:960,44,0	1/1:8,15:24:21.69:359,22,0	0/0:26,0:24:48.11:0,48,685	0/0:21,0:21:47.96:0,48,709	0/0:21,0:21:54.09:0,54,788	0/0:19,0:17:39.09:0,39,561	0/1:10,14:21:3.28:311,0,3	1/1:3,19:21:15.52:341,16,0	0/0:20,0:20:48.07:0,48,702	0/0:16,0:14:42.06:0,42,563	0/0:36,0:36:45.94:0,46,627	0/0:43,0:40:62.31:0,62,809	0/0:31,0:31:40.10:0,40,515	0/0:21,0:21:42.04:0,42,552	0/0:38,0:36:78.06:0,78,1028	0/0:32,0:29:31.30:0,31,420	0/0:30,0:28:81.10:0,81,1087	0/0:22,0:21:38.86:0,39,552	0/0:12,0:10:24.05:0,24,353
chr10	84910726	.	G	GA	8369.87	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-12.996;DP=776;FS=0.956;HRun=3;HaplotypeScore=76.0799;InbreedingCoeff=0.9999;MQ=87.64;MQ0=0;MQRankSum=-3.115;QD=36.23;ReadPosRankSum=0.943;VQSLOD=5.3775;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,41:46:99:1650,120,0	1/1:0,12:12:33.11:462,33,0	0/0:38,0:38:99:0,105,1203	0/0:24,0:24:62.47:0,62,740	0/0:33,0:32:87.27:0,87,1044	0/0:24,0:24:66.16:0,66,756	1/1:0,37:37:99:1429,102,0	0/0:23,0:23:63.19:0,63,756	0/0:39,0:39:99:0,117,1394	1/1:1,24:25:72.23:990,72,0	1/1:2,27:29:60.11:795,60,0	0/0:32,0:32:93.28:0,93,1114	0/0:32,0:32:93.28:0,93,1114	0/0:23,0:23:66.19:0,66,780	0/0:23,0:23:69.21:0,69,828	1/1:0,28:28:81.27:1134,81,0	1/1:0,28:28:78.26:1092,78,0	0/0:18,0:18:48.11:0,48,560	0/0:22,0:22:60.17:0,60,710	0/0:28,0:28:72.22:0,72,863	0/0:45,0:45:99:0,129,1505	0/0:22,0:22:60.18:0,60,720	0/0:22,0:22:63.19:0,63,756	0/0:37,0:36:99:0,105,1246	1/1:0,26:25:60.16:818,60,0	0/0:22,0:22:60.16:0,60,701	0/0:26,0:26:69.21:0,69,828	0/0:12,0:12:36.08:0,36,408
chr10	84912241	.	CT	C	4720.59	PASS	AB=0.526;AC=15;AF=0.268;AN=56;BaseQRankSum=12.165;DP=512;FS=2.677;HRun=2;HaplotypeScore=57.8491;InbreedingCoeff=0.9096;MQ=58.68;MQ0=8;MQRankSum=-2.310;QD=34.71;ReadPosRankSum=1.332;VQSLOD=5.1543;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:31:83.48:1060,83,0	1/1:0,8:8:24.08:317,24,0	0/0:28,0:16:45.15:0,45,664	0/0:37,0:23:66.20:0,66,954	0/0:25,0:25:75.25:0,75,1106	0/0:23,0:23:69.23:0,69,1016	1/1:0,22:22:57.18:740,57,0	0/0:26,0:26:72.21:0,72,1044	0/0:16,0:16:48.16:0,48,719	1/1:0,14:14:42.14:545,42,0	1/1:1,13:14:36.10:450,36,0	0/0:11,0:11:33.11:0,33,495	0/0:9,0:9:27.09:0,27,405	0/0:10,0:10:30.10:0,30,450	0/0:21,0:21:60.20:0,60,899	0/1:1,9:10:17.89:285,0,18	1/1:1,16:17:48.16:623,48,0	0/0:20,0:20:57.19:0,57,854	0/0:18,0:15:45.14:0,45,656	0/0:15,0:15:45.15:0,45,675	0/0:16,0:16:42.14:0,42,628	0/0:10,0:10:30.10:0,30,450	0/0:10,0:10:30.10:0,30,450	0/0:17,0:17:45.15:0,45,667	1/1:0,20:20:54.18:701,54,0	0/0:23,0:23:63.21:0,63,944	0/0:26,0:26:72.24:0,72,1078	0/0:15,0:15:45.15:0,45,675
chr10	84912283	.	TTAAA	T	1626.36	PASS	AB=0.625;AC=15;AF=0.278;AN=54;BaseQRankSum=8.861;DP=384;FS=38.318;HRun=0;HaplotypeScore=83.1777;InbreedingCoeff=0.7632;MQ=52.98;MQ0=7;MQRankSum=-2.682;QD=12.91;ReadPosRankSum=-0.854;VQSLOD=1.2432;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,14:27:8.89:92,9,0	1/1:4,3:7:9.02:125,9,0	0/0:7,0:5:3.01:0,3,74	0/0:12,0:3:3.01:0,3,66	0/0:17,0:17:42.13:0,42,982	0/0:18,0:18:45.15:0,45,1095	1/1:4,5:9:11.82:140,12,0	0/0:32,0:30:63.14:0,63,1425	0/0:11,0:11:21.06:0,21,470	1/1:7,11:18:39.13:650,39,0	1/1:6,14:19:18.02:271,18,0	0/0:5,0:5:6.02:0,6,148	0/0:2,0:2:6.01:0,6,99	0/0:9,0:9:21.07:0,21,517	0/0:14,0:14:36.11:0,36,838	0/1:4,6:10:8.95:208,0,9	1/1:6,8:14:12:200,12,0	0/0:14,0:14:39.08:0,39,851	0/0:13,0:10:21.07:0,21,509	0/0:18,0:17:33.09:0,33,698	0/0:8,0:8:5.98:0,6,71	./.	0/0:7,0:7:12.04:0,12,296	0/0:9,0:9:12.04:0,12,292	1/1:7,14:21:17.83:125,18,0	0/0:15,0:15:39.11:0,39,789	0/0:26,0:25:33.08:0,33,652	0/0:15,0:15:24.07:0,24,544
chr10	84912326	.	GAT	G	1375.09	PASS	AB=0.991;AC=14;AF=0.269;AN=52;BaseQRankSum=7.427;DP=407;FS=0.568;HRun=0;HaplotypeScore=111.8802;InbreedingCoeff=0.5542;MQ=82.35;MQ0=14;MQRankSum=-4.117;QD=7.86;ReadPosRankSum=-0.615;VQSLOD=3.2631;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:33.27:33,0,44	0/0:5,0:5:6.01:0,6,71	0/1:26,1:11:23.21:23,0,40	0/0:57,0:30:26.02:0,26,207	0/0:16,0:16:39.13:0,39,640	0/0:20,0:20:48.15:0,48,765	1/1:3,2:5:6.02:76,6,0	1/1:36,0:35:65.96:745,66,0	0/0:9,0:9:21.07:0,21,351	0/0:12,0:12:11.35:0,11,229	0/0:16,0:16:20.04:0,20,287	0/0:4,0:4:12.04:0,12,201	0/0:7,0:7:15.05:0,15,247	0/0:8,0:8:21.07:0,21,351	0/0:9,0:9:24.08:0,24,401	0/0:8,0:8:10.19:0,10,179	0/1:19,0:19:2.77:3,0,136	0/0:20,0:20:16.74:0,17,840	1/1:8,5:13:33.01:353,33,0	1/1:7,5:11:18.01:193,18,0	./.	./.	0/0:7,0:7:15.05:0,15,245	0/0:2,0:2:3.01:0,3,50	0/1:23,0:23:6.37:6,0,209	0/0:16,0:16:45.15:0,45,750	1/1:17,0:16:14.92:112,15,0	0/0:8,0:8:21.07:0,21,351
chr10	84912332	.	TATATATAG	T	2597.69	PASS	AB=1.000;AC=19;AF=0.352;AN=54;BaseQRankSum=9.701;DP=413;FS=0.000;HRun=0;HaplotypeScore=137.3081;InbreedingCoeff=0.3781;MQ=80.43;MQ0=18;MQRankSum=-7.943;QD=14.12;ReadPosRankSum=4.441;VQSLOD=2.3828;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,11:22:20.14:446,20,0	1/1:5,0:5:3.90:42,4,0	0/0:34,0:11:5.06:0,5,33	0/0:65,0:30:31.05:0,31,148	0/0:17,0:17:45.10:0,45,1423	0/0:19,0:19:54.14:0,54,1655	0/1:4,0:4:1.32:7,0,1	0/1:32,0:31:99:289,0,119	0/0:9,0:9:24.08:0,24,899	0/1:10,0:10:18.10:257,0,18	0/1:15,0:15:43.53:176,0,44	0/0:5,0:5:15.05:0,15,548	0/0:8,0:8:18.06:0,18,720	0/0:8,0:8:24.07:0,24,743	0/0:8,0:8:24.08:0,24,890	0/1:8,0:8:36.83:105,0,37	0/1:18,0:18:0.16:272,0,0	0/0:20,0:20:49.57:0,50,1810	0/1:13,0:12:47.12:139,0,47	1/1:12,0:11:10.76:208,11,0	1/1:6,0:6:0.88:2,1,0	./.	0/0:6,0:6:18.05:0,18,602	0/0:3,0:3:6.02:0,6,179	1/1:23,0:23:34.12:586,34,0	0/0:18,0:18:54.19:0,54,1909	1/1:16,0:15:2.48:236,2,0	0/0:8,0:8:21.07:0,21,854
chr10	84912334	.	TATATAGATAG	T	4036.66	PASS	AB=0.991;AC=20;AF=0.370;AN=54;BaseQRankSum=8.377;DP=419;FS=2.286;HRun=0;HaplotypeScore=144.8247;InbreedingCoeff=0.3175;MQ=79.69;MQ0=22;MQRankSum=-5.817;QD=17.78;ReadPosRankSum=0.726;VQSLOD=3.0253;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:40.38:211,0,40	0/1:5,0:5:2.55:3,0,25	0/1:39,0:11:17.70:18,0,28	0/0:63,0:30:28.94:0,29,220	0/0:16,0:16:42.14:0,42,1766	0/0:18,0:18:54.17:0,54,2128	1/1:3,1:4:6.02:96,6,0	1/1:3,29:31:75.21:1347,75,0	0/0:8,0:8:24.08:0,24,1121	0/1:10,0:10:99:167,0,130	0/1:15,0:15:75.10:75,0,163	0/0:5,0:5:15.05:0,15,692	0/0:7,0:7:18.06:0,18,895	0/0:9,0:9:24.08:0,24,964	0/0:8,0:8:24.08:0,24,1106	0/1:8,0:8:65.80:66,0,127	0/1:20,1:21:32.62:221,0,33	0/0:20,0:20:33.17:0,33,2201	1/1:10,3:12:36.07:628,36,0	1/1:7,5:11:18.06:482,18,0	1/1:5,1:6:1.55:4,2,0	./.	0/0:7,0:7:18.06:0,18,776	0/0:4,0:4:9.03:0,9,327	0/1:24,0:24:99:218,0,107	0/0:19,0:19:57.20:0,57,2509	1/1:7,8:14:18.04:502,18,0	0/0:7,0:7:21.07:0,21,1033
chr10	84912336	.	TATAGATAG	T	4031	PASS	AB=1.000;AC=27;AF=0.500;AN=54;BaseQRankSum=11.163;DP=424;FS=4.983;HRun=0;HaplotypeScore=135.1025;InbreedingCoeff=0.8310;MQ=79.32;MQ0=23;MQRankSum=-8.366;QD=16.00;ReadPosRankSum=0.202;VQSLOD=2.6370;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:23.01:347,23,0	1/1:5,0:5:5.98:78,6,0	0/0:40,0:11:2.50:0,2,9	0/1:64,0:30:4.95:5,0,14	0/0:16,0:16:42.14:0,42,1411	0/0:18,0:18:45.14:0,45,1513	1/1:3,0:4:2.96:20,3,0	1/1:31,0:30:43.72:492,44,0	0/0:8,0:8:24.08:0,24,881	1/1:11,0:11:24.04:451,24,0	1/1:14,0:14:17.95:318,18,0	0/0:5,0:5:15.05:0,15,530	0/0:6,0:7:18.06:0,18,732	0/0:9,0:9:27.08:0,27,729	0/0:8,0:8:24.08:0,24,838	1/1:8,0:8:12.03:206,12,0	1/1:22,0:22:29.42:510,29,0	0/0:20,0:20:57.10:0,57,1682	1/1:13,0:12:12.48:199,12,0	1/1:12,0:11:15.05:253,15,0	1/1:3,0:7:0.88:2,1,0	./.	0/0:7,0:7:18.04:0,18,579	0/0:5,0:5:12.04:0,12,316	1/1:13,11:24:44.93:862,45,0	0/0:19,0:19:57.20:0,57,1926	1/1:9,0:14:15.52:290,16,0	0/0:7,0:7:21.07:0,21,813
chr10	84912353	.	ATAGATAAATAG	A	3454.73	PASS	AB=0.912;AC=22;AF=0.393;AN=56;BaseQRankSum=10.073;DP=431;FS=24.788;HRun=0;HaplotypeScore=156.4841;InbreedingCoeff=0.5352;MQ=52.49;MQ0=23;MQRankSum=-8.280;QD=16.14;ReadPosRankSum=-4.126;VQSLOD=0.1539;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:30.50:477,31,0	1/1:4,3:7:16.95:133,17,0	0/0:39,0:6:7.27:0,7,175	0/1:39,0:13:26.35:26,0,242	0/0:21,0:21:63.22:0,63,2872	0/0:18,0:18:54.18:0,54,2398	1/1:8,0:7:8.80:62,9,0	0/1:29,0:28:10.75:173,0,11	0/0:11,0:11:33.11:0,33,1527	0/1:8,5:13:31.82:449,0,32	0/1:8,4:12:16.42:248,0,16	0/0:7,0:7:21.07:0,21,930	0/0:7,0:7:18.06:0,18,1063	0/0:11,0:11:33.11:0,33,1332	0/0:9,0:9:27.09:0,27,1256	1/1:3,4:7:3.83:226,4,0	1/1:12,9:21:50.54:591,51,0	0/0:21,0:21:63.03:0,63,2506	0/1:12,0:10:17.06:257,0,17	1/1:15,0:15:30.39:297,30,0	1/1:8,0:8:7.14:40,7,0	0/1:2,0:2:1.09:15,0,1	0/0:9,0:9:27.09:0,27,1089	0/0:7,0:7:21.07:0,21,870	0/0:24,0:24:53.94:0,54,698	0/0:25,0:25:75.26:0,75,3346	1/1:18,0:17:31.46:461,31,0	0/0:8,0:8:24.08:0,24,1222
chr10	84912360	.	AATAG	A	4608.42	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=10.223;DP=432;FS=5.482;HRun=0;HaplotypeScore=110.2670;InbreedingCoeff=0.9628;MQ=51.61;MQ0=19;MQRankSum=-7.573;QD=25.75;ReadPosRankSum=-5.556;VQSLOD=2.7626;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,12:25:71.60:820,72,0	1/1:5,1:6:14.92:157,15,0	0/0:35,0:7:13.43:0,13,149	0/0:30,0:11:12.04:0,12,247	0/0:24,0:24:66.18:0,66,1372	0/0:18,0:18:45.15:0,45,1016	1/1:7,1:7:17.86:154,18,0	1/1:28,0:27:44.02:577,44,0	0/0:12,0:12:33.11:0,33,728	1/1:12,0:12:36.08:545,36,0	1/1:11,1:12:20.94:305,21,0	0/0:9,0:9:24.08:0,24,502	0/0:7,0:7:18.06:0,18,449	0/0:11,0:11:27.08:0,27,554	0/0:8,0:8:21.05:0,21,450	1/1:5,1:6:14.96:183,15,0	1/1:16,6:22:46.55:494,47,0	0/0:22,0:22:42.57:0,43,847	1/1:9,4:10:26.58:346,27,0	1/1:3,12:15:26.84:270,27,0	1/1:8,1:9:11.87:105,12,0	1/1:0,4:4:11.74:74,12,0	0/0:9,0:9:27.08:0,27,529	0/0:8,0:8:24.08:0,24,498	0/0:25,0:25:7.13:0,7,418	0/0:25,0:25:62.95:0,63,1325	1/1:12,7:18:44.95:578,45,0	0/0:9,0:9:24.08:0,24,550
chr10	84913475	.	CTATT	C	706.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.738;DP=444;FS=9.765;HRun=0;HaplotypeScore=67.2982;InbreedingCoeff=0.9549;MQ=80.33;MQ0=1;MQRankSum=-1.092;QD=32.12;ReadPosRankSum=-0.740;VQSLOD=2.5062;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:30.10:0,30,760	0/0:6,0:6:18.06:0,18,473	0/0:14,0:14:36.12:0,36,850	0/0:9,0:9:24.08:0,24,542	0/0:14,0:14:39.13:0,39,947	0/0:30,0:30:90.31:0,90,2230	1/1:2,20:22:45.15:801,45,0	0/0:22,0:22:60.21:0,60,1500	0/0:19,0:19:54.19:0,54,1402	0/0:15,0:15:45.15:0,45,1174	0/0:15,0:15:39.13:0,39,1040	0/0:17,0:17:48.16:0,48,1257	0/0:13,0:13:39.13:0,39,987	0/0:23,0:22:66.23:0,66,1733	0/0:19,0:19:57.20:0,57,1458	0/0:16,0:16:48.16:0,48,1220	0/0:25,0:25:75.26:0,75,1923	0/0:15,0:15:45.15:0,45,1155	0/0:23,0:23:66.18:0,66,1598	0/0:14,0:14:39.13:0,39,995	0/0:6,0:6:18.06:0,18,480	0/0:7,0:7:18.06:0,18,480	0/0:15,0:15:36.12:0,36,928	0/0:7,0:7:21.07:0,21,523	0/0:14,0:14:33.07:0,33,810	0/0:25,0:25:60.20:0,60,1487	0/0:22,0:22:63.22:0,63,1673	0/0:6,0:6:15.04:0,15,329
chr10	84914046	.	CT	C	641.82	PASS	AB=0.765;AC=10;AF=0.179;AN=56;BaseQRankSum=-3.663;DP=455;FS=3.415;HRun=15;HaplotypeScore=74.6495;InbreedingCoeff=0.2759;MQ=71.38;MQ0=5;MQRankSum=3.354;QD=5.22;ReadPosRankSum=0.889;VQSLOD=2.5946;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:51.71:0,52,283	0/0:3,0:4:8.78:0,9,53	0/0:31,1:10:5.92:0,6,39	0/0:29,0:15:0.22:0,0,30	0/1:17,1:17:6.60:7,0,163	0/0:14,0:15:25.33:0,25,193	0/0:14,0:14:26.18:0,26,168	1/1:12,14:26:19.54:232,20,0	0/0:11,0:12:29.83:0,30,250	0/0:17,0:17:13.06:0,13,54	0/0:5,0:5:0:0,0,0	0/0:22,0:23:43.90:0,44,358	0/0:14,1:16:26.42:0,26,197	0/0:14,0:15:12.38:0,12,149	0/1:8,1:9:8.06:8,0,38	0/0:17,0:17:30.19:0,30,159	0/0:21,0:18:16.46:0,16,76	0/0:14,0:16:20.16:0,20,175	0/1:11,8:19:33.92:128,0,34	0/1:4,4:8:14.49:46,0,14	1/1:7,14:22:35.85:222,36,0	0/1:4,6:11:3.91:80,0,4	0/0:8,1:7:14.99:0,15,130	0/0:22,0:21:32.03:0,32,269	0/0:9,0:9:5.21:0,5,23	0/0:15,1:16:16.13:0,16,238	0/1:6,3:9:19.20:68,0,19	0/0:8,0:13:31.98:0,32,200
chr10	84914061	.	T	TTC	999.48	PASS	AB=0.946;AC=11;AF=0.196;AN=56;BaseQRankSum=-0.163;DP=458;FS=19.703;HRun=0;HaplotypeScore=67.1802;InbreedingCoeff=0.1447;MQ=58.35;MQ0=17;MQRankSum=-4.163;QD=7.19;ReadPosRankSum=1.060;VQSLOD=1.2490;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:31:43.10:514,43,0	0/1:3,0:3:25.95:26,0,31	0/0:24,0:3:3.89:0,4,32	0/1:24,0:9:21.12:21,0,32	0/0:19,0:16:41.77:0,42,372	0/0:14,0:13:32.68:0,33,314	0/1:7,0:17:72.35:173,0,72	0/0:25,0:28:39.02:0,39,420	0/0:16,0:16:41.76:0,42,413	0/1:6,0:13:48.72:82,0,49	1/1:4,0:6:2.92:17,3,0	0/0:19,0:19:50.62:0,51,495	0/0:17,0:17:35.60:0,36,329	0/0:15,0:15:41.99:0,42,400	0/0:11,0:10:20.73:0,21,177	0/1:13,0:13:16.95:123,0,17	0/1:20,0:17:20.05:128,0,20	0/0:17,0:17:44.34:0,44,390	0/0:21,0:20:47.92:0,48,376	0/0:7,0:7:14.96:0,15,131	0/0:20,0:20:46.79:0,47,355	0/0:13,0:13:27.21:0,27,221	0/0:9,0:7:21.01:0,21,216	0/0:20,0:20:49.85:0,50,513	0/1:7,0:8:12.87:68,0,13	0/0:15,0:15:45.04:0,45,481	0/0:17,0:18:44.62:0,45,351	0/0:14,0:13:21.33:0,21,216
chr10	84914321	.	ACCGAGTT	A	3629.85	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=9.912;DP=477;FS=3.599;HRun=0;HaplotypeScore=115.4408;InbreedingCoeff=0.9028;MQ=82.85;MQ0=0;MQRankSum=-11.006;QD=34.57;ReadPosRankSum=0.675;VQSLOD=3.5542;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,24:34:45.15:1051,45,0	1/1:1,2:3:6.02:147,6,0	0/0:13,0:13:39.12:0,39,1137	0/0:20,0:20:20.95:0,21,1318	0/0:15,0:15:42.14:0,42,1519	0/0:12,0:12:27.09:0,27,1040	1/1:8,18:26:39.13:940,39,0	0/0:25,0:25:51.17:0,51,1798	0/0:16,0:16:39.13:0,39,1460	1/1:3,3:6:9:169,9,0	1/1:2,3:5:6.02:147,6,0	0/0:23,0:23:66.23:0,66,2538	0/0:18,0:18:48.16:0,48,1831	0/0:18,0:18:48.16:0,48,1807	0/0:18,0:18:48.16:0,48,1849	1/1:1,5:6:18.06:441,18,0	1/1:7,13:20:27.09:662,27,0	0/0:17,0:17:42.14:0,42,1576	0/0:19,0:19:27.09:0,27,1040	0/0:11,0:11:33.10:0,33,1132	0/0:60,0:60:99:0,151,5620	0/0:8,0:8:21.07:0,21,808	0/0:11,0:11:33.10:0,33,1151	0/0:24,0:24:57.20:0,57,2114	1/1:3,2:5:3.01:73,3,0	0/0:18,0:18:42.14:0,42,1593	0/0:21,0:21:63.22:0,63,2282	0/0:5,0:5:6.02:0,6,231
chr10	84914812	.	TCC	T	1143.08	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=2.166;DP=369;FS=3.877;HRun=4;HaplotypeScore=60.6457;InbreedingCoeff=0.3608;MQ=81.35;MQ0=2;MQRankSum=-0.022;QD=15.88;ReadPosRankSum=-1.724;VQSLOD=-0.3018;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,14:29:78.16:991,78,0	0/0:1,0:1:2.97:0,3,20	0/0:30,0:17:40.40:0,40,487	0/0:43,1:22:33.77:0,34,317	0/0:8,0:8:24.06:0,24,390	0/0:19,0:19:43.40:0,43,907	0/1:19,0:19:31.38:172,0,31	0/0:15,0:15:42.07:0,42,597	0/0:8,0:8:24.03:0,24,375	0/0:6,0:6:11.35:0,11,60	0/0:3,0:3:2.57:0,3,29	0/0:12,0:12:33.09:0,33,529	0/0:7,0:7:21.05:0,21,354	0/0:10,0:10:30.05:0,30,488	0/0:15,0:15:45.09:0,45,745	0/1:11,0:11:73.98:74,0,91	0/1:10,0:10:8.05:8,0,76	0/0:16,0:16:48.11:0,48,721	0/0:15,0:15:35.90:0,36,471	0/0:6,0:6:15.04:0,15,248	0/0:17,0:17:45.09:0,45,668	0/0:3,0:3:9.03:0,9,168	0/0:6,0:6:15.04:0,15,250	0/0:12,0:12:29.88:0,30,443	1/1:3,0:3:3:28,3,0	0/0:22,0:22:35.25:0,35,964	0/0:11,0:11:33.08:0,33,520	0/0:8,0:8:24.07:0,24,419
chr10	84914830	.	CA	C	198.74	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=3.544;DP=500;FS=0.824;HRun=10;HaplotypeScore=90.4084;InbreedingCoeff=0.4342;MQ=73.82;MQ0=8;MQRankSum=1.972;QD=4.85;ReadPosRankSum=3.458;VQSLOD=1.2879;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,10:26:32.40:265,32,0	0/0:2,0:2:5.81:0,6,34	0/0:69,1:26:32.42:0,32,297	0/0:72,1:28:5.28:0,5,122	0/0:20,0:20:46.19:0,46,400	0/0:29,0:29:48.43:0,48,549	0/0:3,0:11:8.77:0,9,64	0/0:13,0:13:32.56:0,33,272	0/0:15,0:15:6.51:0,7,41	0/0:6,0:7:20.06:0,20,107	0/0:4,0:4:2.96:0,3,20	0/0:16,0:16:47.28:0,47,388	0/0:15,0:15:41.85:0,42,363	0/0:18,0:18:41.76:0,42,365	0/0:18,0:23:35.97:0,36,335	0/0:9,0:9:14.50:0,15,83	0/0:12,0:13:5.81:0,6,34	0/0:12,0:12:29.97:0,30,286	0/0:11,0:11:13.56:0,14,74	0/0:8,0:8:15.94:0,16,108	0/0:12,0:12:9.43:0,9,72	0/0:10,0:10:23.95:0,24,211	0/1:10,0:11:3.68:31,0,4	0/0:18,0:18:9.87:0,10,106	0/1:3,0:3:5.67:17,0,6	0/0:22,1:23:30.94:0,31,474	0/0:15,0:15:30.26:0,30,226	0/0:8,0:8:18.01:0,18,173
chr10	84914840	.	A	AAAG	953.06	PASS	AB=0.839;AC=21;AF=0.375;AN=56;BaseQRankSum=0.813;DP=564;FS=22.858;HRun=0;HaplotypeScore=97.2594;InbreedingCoeff=0.2148;MQ=70.59;MQ0=10;MQRankSum=-0.197;QD=3.62;ReadPosRankSum=-3.705;VQSLOD=-0.7507;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:41.72:0,42,438	1/1:1,2:4:6.02:98,6,0	0/0:78,0:26:36.97:0,37,431	0/1:88,0:28:24.31:24,0,103	0/0:17,0:18:13.91:0,14,379	0/0:27,0:27:44.01:0,44,571	0/1:11,0:11:14.43:14,0,28	0/1:10,0:19:79.25:79,0,167	0/0:4,0:18:16.81:0,17,218	1/1:7,0:8:23.54:240,24,0	1/1:1,3:5:4.32:23,4,0	0/1:18,0:19:4.38:4,0,266	0/0:15,0:15:1.66:0,2,276	0/0:17,0:17:16.61:0,17,368	0/0:22,0:24:33.01:0,33,409	1/1:6,1:10:15.03:179,15,0	1/1:3,14:19:3.48:65,3,0	0/0:13,0:13:35.93:0,36,407	1/1:3,0:11:9.02:140,9,0	0/1:8,0:11:20.17:52,0,20	0/0:5,0:10:1.95:0,2,19	0/0:9,0:9:21.77:0,22,200	0/1:10,0:10:22.54:23,0,36	0/1:17,0:17:54.36:128,0,54	0/1:2,0:7:5.82:32,0,6	0/0:27,0:27:65.36:0,65,665	0/1:10,0:20:27.82:28,0,75	0/0:14,0:14:20.86:0,21,273
chr10	84915030	.	CTT	C	2391.66	PASS	AC=26;AF=0.481;AN=54;BaseQRankSum=3.617;DP=394;FS=1.393;HRun=3;HaplotypeScore=61.5813;InbreedingCoeff=0.9325;MQ=73.01;MQ0=25;MQRankSum=1.133;QD=19.60;ReadPosRankSum=-0.168;VQSLOD=1.0323;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:20.96:170,21,0	1/1:5,0:5:14.97:122,15,0	0/0:62,0:21:31.47:0,31,302	0/0:76,0:30:21.43:0,21,368	0/0:21,0:20:60.02:0,60,574	0/0:11,0:11:30.48:0,30,268	1/1:6,0:6:11.98:98,12,0	1/1:16,0:15:41.94:366,42,0	0/0:10,0:9:24.48:0,24,216	1/1:5,7:11:33:291,33,0	1/1:1,4:5:2.99:24,3,0	0/0:11,0:11:33:0,33,311	0/0:8,0:8:19.25:0,19,164	0/0:10,0:8:23.25:0,23,222	0/0:4,0:4:12.01:0,12,109	1/1:6,0:6:17.97:147,18,0	1/1:11,0:11:29.83:231,30,0	0/0:12,0:12:32.95:0,33,278	1/1:11,0:11:29.97:260,30,0	1/1:10,0:10:29.96:246,30,0	1/1:11,0:10:29.97:251,30,0	./.	0/0:6,0:6:18.01:0,18,162	0/0:12,0:12:23.82:0,24,195	1/1:5,0:4:9:77,9,0	0/0:15,0:15:42.04:0,42,386	1/1:14,0:14:41.84:326,42,0	0/0:9,0:7:5.08:0,5,104
chr10	84915275	.	A	AC	2355.59	PASS	AB=0.864;AC=13;AF=0.232;AN=56;BaseQRankSum=-9.300;DP=447;FS=3.822;HRun=7;HaplotypeScore=46.4230;InbreedingCoeff=0.8839;MQ=73.97;MQ0=6;MQRankSum=-0.753;QD=21.81;ReadPosRankSum=0.652;VQSLOD=3.2285;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.11:0,66,637	1/1:1,8:9:21.06:254,21,0	0/0:22,0:15:30.01:0,30,280	0/0:11,0:11:10.20:0,10,165	0/0:16,0:16:45.07:0,45,434	0/0:17,0:17:51.08:0,51,492	1/1:2,13:15:29.93:362,30,0	0/0:18,0:18:33.04:0,33,319	0/0:11,0:11:27.03:0,27,254	1/1:3,8:11:27.07:315,27,0	1/1:1,15:16:33.10:398,33,0	0/0:19,0:19:54.06:0,54,509	0/0:13,0:13:36.04:0,36,342	0/0:17,0:17:51.08:0,51,492	0/0:18,0:18:48.07:0,48,463	1/1:0,14:14:33.10:399,33,0	1/1:3,21:24:63.19:761,63,0	0/0:26,0:26:66.10:0,66,637	0/0:18,0:16:39.06:0,39,377	0/0:16,0:15:33.05:0,33,318	0/0:4,0:4:12.02:0,12,116	0/0:12,0:12:30.03:0,30,284	0/0:12,0:12:30.05:0,30,290	0/0:24,0:24:66.08:0,66,630	0/0:12,0:12:27.04:0,27,261	0/1:16,3:19:57.55:58,0,353	0/0:18,0:18:51.08:0,51,492	0/0:12,0:12:30.05:0,30,290
chr10	84915698	.	AAGAGAGAG	A	753.78	PASS	AB=1.000;AC=7;AF=0.140;AN=50;BaseQRankSum=-1.062;DP=567;FS=6.904;HRun=0;HaplotypeScore=188.8152;InbreedingCoeff=0.6266;MQ=39.22;MQ0=45;MQRankSum=-6.164;QD=6.92;ReadPosRankSum=-1.514;VQSLOD=1.9783;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:26:8.85:0,9,30	0/0:7,0:6:11.18:0,11,61	./.	./.	0/0:26,0:25:18.06:0,18,416	0/0:23,0:21:33.06:0,33,479	0/0:14,0:8:6.73:0,7,36	1/1:31,0:26:20.31:377,20,0	0/0:18,0:15:26.98:0,27,603	0/1:23,0:18:8.22:8,0,113	0/0:13,0:9:1.28:0,1,4	0/0:23,0:19:30.54:0,31,610	0/0:29,0:29:58.74:0,59,1160	0/0:17,0:17:29.97:0,30,467	0/0:22,0:20:45.14:0,45,1121	0/0:18,0:17:14.19:0,14,111	0/0:13,0:10:11.79:0,12,74	0/0:19,0:15:37.83:0,38,851	1/1:30,0:28:29.90:465,30,0	1/1:22,3:23:5.71:37,6,0	./.	0/0:20,3:23:5.37:0,5,32	0/0:18,0:17:21.07:0,21,333	0/0:41,0:31:48.58:0,49,976	0/0:21,0:20:13.45:0,13,36	0/0:35,0:33:71.37:0,71,1316	0/0:18,0:15:0.60:0,1,22	0/0:11,0:11:23.94:0,24,306
chr10	84915708	.	G	GAC	794.05	PASS	AB=0.793;AC=6;AF=0.115;AN=52;BaseQRankSum=2.275;DP=573;FS=5.016;HRun=0;HaplotypeScore=152.6833;InbreedingCoeff=0.1426;MQ=40.05;MQ0=46;MQRankSum=-5.224;QD=5.84;ReadPosRankSum=-2.295;VQSLOD=2.8640;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:27:12.65:0,13,58	0/0:6,0:5:11.19:0,11,62	./.	./.	0/0:26,0:25:21.05:0,21,297	0/0:24,0:22:48.04:0,48,558	0/0:12,1:7:5.87:0,6,35	0/1:42,0:36:99:212,0,124	0/0:18,0:15:29.98:0,30,383	0/1:22,0:17:4.02:4,0,148	0/0:11,0:8:5.06:0,5,22	0/0:22,0:18:14.54:0,15,399	0/0:26,0:26:59.52:0,60,788	0/0:18,0:18:33.46:0,33,413	0/0:20,0:18:45.14:0,45,663	0/0:19,0:18:15.21:0,15,103	0/0:14,0:11:11.84:0,12,88	0/0:21,0:17:26.02:0,26,568	0/1:9,19:26:32.12:615,0,32	1/1:9,15:23:6.36:33,6,0	0/0:15,1:7:2.60:0,3,10	0/0:12,13:26:7.88:0,8,43	0/0:19,0:18:24.07:0,24,332	0/0:43,0:32:57.09:0,57,737	0/0:19,0:18:13.65:0,14,44	0/0:34,0:32:83.62:0,84,1033	0/1:5,11:15:22.19:45,0,22	0/0:10,0:10:24:0,24,296
chr10	84915718	.	CAG	C	1237.05	PASS	AB=0.826;AC=13;AF=0.260;AN=50;BaseQRankSum=4.956;DP=554;FS=31.654;HRun=0;HaplotypeScore=141.1139;InbreedingCoeff=0.4544;MQ=41.24;MQ0=41;MQRankSum=-6.111;QD=7.78;ReadPosRankSum=-3.788;VQSLOD=1.3508;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,4:26:15.71:0,16,109	1/1:6,0:6:2.68:12,3,0	./.	./.	0/0:26,0:25:24.08:0,24,393	0/0:26,0:24:51.16:0,51,810	0/0:11,0:8:2.92:0,3,17	0/1:22,19:34:99:573,0,349	0/0:19,0:17:36.11:0,36,567	0/1:12,0:11:25.49:25,0,49	1/1:6,0:6:0.74:2,1,0	0/0:22,0:19:35.80:0,36,545	0/0:26,0:26:54.65:0,55,876	0/0:18,0:18:35.79:0,36,540	0/0:19,0:17:45.15:0,45,765	0/0:21,0:20:11.20:0,11,94	0/0:17,0:14:2.46:0,2,18	0/0:20,0:16:29.64:0,30,726	0/1:23,1:21:99:379,0,128	0/0:21,0:19:4.05:0,4,28	1/1:15,1:9:9.01:101,9,0	1/1:26,2:28:12.04:155,12,0	0/0:14,0:14:24.08:0,24,404	0/0:42,1:32:56.90:0,57,947	./.	0/0:33,0:31:64.77:0,65,968	1/1:19,1:18:6.85:135,7,0	0/0:10,0:10:15.03:0,15,228
chr10	84915748	.	CAG	C	1258.08	PASS	AB=0.781;AC=14;AF=0.269;AN=52;BaseQRankSum=8.174;DP=552;FS=1.319;HRun=0;HaplotypeScore=113.8104;InbreedingCoeff=0.7233;MQ=47.88;MQ0=22;MQRankSum=-0.452;QD=9.12;ReadPosRankSum=-1.321;VQSLOD=3.0483;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:27:24.67:79,0,25	1/1:1,5:5:6.02:80,6,0	./.	./.	0/0:25,0:25:42.14:0,42,727	0/0:24,0:23:60.19:0,60,1006	1/1:5,13:16:6.02:80,6,0	0/0:46,0:39:90.06:0,90,1258	0/0:22,0:21:57.19:0,57,962	1/1:6,7:12:27.02:337,27,0	1/1:0,5:5:3.01:40,3,0	0/0:16,0:16:42.13:0,42,692	0/0:21,0:21:54.18:0,54,915	0/0:17,0:17:42.06:0,42,710	0/0:23,0:22:57.16:0,57,926	0/1:6,21:26:6.82:494,0,7	1/1:3,15:17:15.05:199,15,0	0/0:24,0:23:66.20:0,66,1058	0/0:26,0:25:66.15:0,66,996	0/0:18,0:16:14.99:0,15,203	0/0:20,0:16:33.05:0,33,544	0/0:26,0:26:27.04:0,27,467	0/0:14,0:14:30.09:0,30,477	0/0:33,0:29:68.93:0,69,1152	1/1:9,12:20:9.03:120,9,0	0/0:25,0:24:30.44:0,30,996	0/0:19,0:19:24.08:0,24,415	0/0:10,0:10:24.08:0,24,416
chr10	84918335	.	CGTGT	C	674.63	PASS	AB=0.862;AC=11;AF=0.220;AN=50;BaseQRankSum=3.889;DP=481;FS=0.000;HRun=0;HaplotypeScore=106.7792;InbreedingCoeff=0.6547;MQ=64.37;MQ0=11;MQRankSum=-0.407;QD=6.55;ReadPosRankSum=-0.253;VQSLOD=1.9893;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:25:22.15:22,0,47	1/1:5,2:7:6.02:94,6,0	./.	./.	0/0:15,0:18:17.26:0,17,243	0/0:14,0:15:20.81:0,21,365	0/0:28,0:29:3.01:0,3,43	0/0:12,0:10:18.11:0,18,203	0/0:14,0:16:11.76:0,12,178	1/1:11,7:18:21.06:282,21,0	1/1:8,0:9:6.01:74,6,0	0/0:13,0:17:20.79:0,21,359	0/0:11,0:10:18:0,18,270	0/0:19,0:19:26.81:0,27,431	0/0:12,0:14:17.47:0,17,179	1/1:12,6:18:12.03:188,12,0	1/1:21,2:25:12.03:169,12,0	0/0:17,0:17:29.82:0,30,497	0/0:19,0:19:1.25:0,1,3	0/0:10,0:11:3.01:0,3,69	0/0:29,0:25:12.04:0,12,201	./.	0/0:15,0:15:15.04:0,15,275	0/0:23,0:26:41.59:0,42,644	0/0:14,0:14:6.02:0,6,100	0/0:15,0:15:15.52:0,16,300	0/0:16,0:21:11.21:0,11,137	0/0:8,0:9:5.75:0,6,83
chr10	84918534	.	GA	G	5304.48	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.452;DP=533;FS=0.725;HRun=5;HaplotypeScore=66.0448;InbreedingCoeff=0.9904;MQ=88.09;MQ0=0;MQRankSum=-2.127;QD=29.97;ReadPosRankSum=2.805;VQSLOD=5.4991;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,54:54:99:1803,159,0	1/1:0,12:12:33.09:374,33,0	0/0:25,0:25:64.46:0,64,780	0/0:14,0:14:33.06:0,33,398	0/0:22,0:22:60.14:0,60,777	0/0:18,0:17:54.18:0,54,738	1/1:1,21:22:54.15:613,54,0	0/0:21,0:21:60.20:0,60,821	0/0:9,0:9:27.08:0,27,353	1/1:3,19:22:57.16:647,57,0	1/1:0,19:19:42.11:473,42,0	0/0:27,0:27:78.26:0,78,1064	0/0:10,0:10:27.09:0,27,369	0/0:27,0:27:78.23:0,78,1034	0/0:23,0:23:63.20:0,63,847	1/1:2,13:15:33.09:374,33,0	1/1:0,24:24:69.20:783,69,0	0/0:23,0:23:63.21:0,63,862	0/0:5,0:5:12.04:0,12,164	0/0:24,0:24:66.15:0,66,856	0/0:12,0:12:33.10:0,33,435	0/0:13,0:13:39.12:0,39,517	0/0:20,0:20:54.18:0,54,736	0/0:17,0:17:48.16:0,48,657	1/1:0,9:9:21.06:238,21,0	0/0:16,1:17:14.11:0,14,568	0/0:16,0:16:48.16:0,48,656	0/0:13,0:13:36.12:0,36,493
chr10	84918814	.	T	TA	1400.41	PASS	AB=0.906;AC=16;AF=0.286;AN=56;BaseQRankSum=4.407;DP=406;FS=0.000;HRun=12;HaplotypeScore=55.2512;InbreedingCoeff=0.7430;MQ=49.97;MQ0=6;MQRankSum=-1.787;QD=11.20;ReadPosRankSum=-0.204;VQSLOD=2.7375;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:52.65:0,53,378	1/1:1,5:6:9.01:88,9,0	0/0:6,0:4:8.63:0,9,54	0/0:13,0:4:5.96:0,6,44	0/1:11,1:12:5.32:5,0,129	0/0:20,1:21:22.04:0,22,321	1/1:5,12:17:8.15:240,8,0	0/0:12,0:21:20.34:0,20,64	0/0:16,0:15:32.80:0,33,241	1/1:5,8:13:23.87:218,24,0	1/1:4,9:13:15.45:137,15,0	0/0:13,0:13:23.78:0,24,173	0/0:10,0:10:17.86:0,18,131	0/0:9,0:10:22.91:0,23,159	0/0:16,0:15:29.80:0,30,219	1/1:4,5:8:12.02:117,12,0	1/1:3,27:30:54.56:526,55,0	0/0:19,0:17:29.71:0,30,215	0/0:10,0:9:14.11:0,14,67	0/0:5,0:12:16.14:0,16,73	0/0:1,0:4:4.07:0,4,12	0/0:2,0:3:2.03:0,2,6	0/1:7,1:8:8.29:8,0,110	0/0:12,0:12:32.80:0,33,239	1/1:7,9:16:26.99:250,27,0	0/0:19,0:18:41.68:0,42,301	0/0:4,0:20:32.58:0,33,94	0/0:20,0:20:28.61:0,29,213
chr10	84919020	.	G	GA	269.14	PASS	AB=0.985;AC=6;AF=0.115;AN=52;BaseQRankSum=3.843;DP=363;FS=22.445;HRun=13;HaplotypeScore=75.3252;InbreedingCoeff=0.4993;MQ=64.03;MQ0=15;MQRankSum=-3.260;QD=4.02;ReadPosRankSum=-0.785;VQSLOD=-0.3229;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:12:10.98:75,11,0	0/0:4,0:4:5.21:0,5,27	0/0:26,0:13:2.33:0,2,135	0/1:31,1:13:10.04:10,0,43	0/0:20,0:19:32.99:0,33,301	0/0:22,0:22:47.11:0,47,463	1/1:2,9:10:27.08:303,27,0	0/0:19,0:18:38.48:0,38,328	0/0:10,0:9:24.01:0,24,218	0/1:9,0:8:1.62:2,0,59	0/0:13,0:12:22.79:0,23,132	0/0:5,0:5:12:0,12,108	0/0:12,0:12:30.01:0,30,272	0/0:4,0:3:6:0,6,55	0/0:10,0:9:21:0,21,188	0/0:9,0:9:20.30:0,20,114	0/0:8,0:6:8.42:0,8,43	0/0:21,0:18:38.96:0,39,356	0/0:20,0:18:40.25:0,40,335	0/0:19,0:18:16.36:0,16,257	0/0:1,0:1:3:0,3,27	./.	0/0:7,0:7:17.98:0,18,158	./.	0/0:25,0:25:62.73:0,63,544	0/0:14,0:14:38.81:0,39,335	0/0:13,0:12:25.17:0,25,169	0/0:12,0:12:36.02:0,36,329
chr10	84919041	.	TAA	T	1583.50	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.285;DP=397;FS=8.760;HRun=10;HaplotypeScore=82.8269;InbreedingCoeff=0.8873;MQ=75.07;MQ0=4;MQRankSum=-9.742;QD=17.99;ReadPosRankSum=1.497;VQSLOD=2.0540;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:11.98:118,12,0	1/1:2,0:2:2.98:23,3,0	0/0:49,0:23:46.54:0,47,553	0/0:42,0:18:14.77:0,15,127	0/0:17,0:17:45.15:0,45,714	0/0:20,0:20:57.17:0,57,872	1/1:3,9:12:30.01:281,30,0	0/0:27,0:27:72.22:0,72,1083	0/0:11,0:11:27.09:0,27,428	1/1:9,0:9:27.04:262,27,0	1/1:11,0:10:27.01:245,27,0	0/0:6,0:6:17.55:0,18,244	0/0:10,0:10:30.10:0,30,474	0/0:6,0:6:15.05:0,15,224	0/0:9,0:9:27.08:0,27,406	1/1:10,0:10:24.03:227,24,0	1/1:9,0:9:9.02:89,9,0	0/0:18,0:17:45:0,45,687	0/0:21,0:21:48.16:0,48,754	0/0:18,0:18:45.15:0,45,699	0/0:1,0:1:3.01:0,3,48	0/0:1,0:1:3.01:0,3,46	0/0:8,0:8:24.08:0,24,372	0/0:5,0:5:15.05:0,15,235	1/1:19,0:19:54.08:533,54,0	0/0:12,0:12:33.11:0,33,524	0/0:14,0:14:36.12:0,36,568	0/0:13,0:13:39.13:0,39,619
chr10	84919047	.	A	AAATT	1496.62	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=7.957;DP=406;FS=1.237;HRun=0;HaplotypeScore=105.0369;InbreedingCoeff=0.7567;MQ=76.43;MQ0=4;MQRankSum=-8.048;QD=15.59;ReadPosRankSum=-0.916;VQSLOD=3.2616;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:13.77:179,14,0	1/1:2,0:2:3:48,3,0	0/0:48,0:23:43.31:0,43,685	0/0:41,0:17:21.80:0,22,223	0/0:18,0:18:54.16:0,54,922	0/0:19,0:19:57.20:0,57,1023	0/1:11,0:11:22.67:23,0,55	0/0:31,0:31:84.22:0,84,1378	0/0:9,0:9:27.09:0,27,495	1/1:11,0:11:8.09:169,8,0	1/1:12,0:11:26.05:310,26,0	0/0:7,0:7:21.07:0,21,345	0/0:11,0:11:33.10:0,33,563	0/0:5,0:5:15.05:0,15,275	0/0:10,0:10:30.09:0,30,512	1/1:11,0:11:0.76:126,1,0	1/1:13,1:14:12.66:148,13,0	0/0:17,0:16:45.15:0,45,814	0/0:20,0:20:54.16:0,54,928	0/0:15,0:15:45.14:0,45,797	0/0:2,0:2:6.02:0,6,90	0/0:1,0:1:3.01:0,3,55	0/0:8,0:8:24.08:0,24,416	0/0:6,0:6:18.06:0,18,321	1/1:8,11:18:21.06:673,21,0	0/0:13,0:13:39.13:0,39,687	0/0:14,0:14:39.13:0,39,692	0/0:15,0:15:45.13:0,45,766
chr10	84919048	.	A	AATT	1298.19	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=7.894;DP=408;FS=0.583;HRun=0;HaplotypeScore=98.4898;InbreedingCoeff=0.7186;MQ=76.36;MQ0=4;MQRankSum=-7.643;QD=13.52;ReadPosRankSum=-1.253;VQSLOD=2.9248;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,2:16:6.59:161,7,0	1/1:2,0:2:3:48,3,0	0/0:48,0:23:34.07:0,34,660	0/0:41,0:17:20.75:0,21,200	0/0:18,0:18:54.18:0,54,891	0/0:20,0:20:57.19:0,57,942	0/1:11,0:11:13.52:14,0,65	0/0:31,0:31:87.27:0,87,1331	0/0:9,0:9:27.09:0,27,454	1/1:7,4:11:5.24:172,5,0	1/1:5,7:11:25.65:303,26,0	0/0:7,0:7:21.07:0,21,322	0/0:12,0:12:33.11:0,33,542	0/0:5,0:5:15.05:0,15,252	0/0:10,0:10:30.09:0,30,475	1/1:7,4:11:0.21:145,0,0	1/1:11,3:14:8.78:82,9,0	0/0:17,0:16:45.15:0,45,750	0/0:19,0:19:57.13:0,57,869	0/0:16,0:16:45.14:0,45,731	0/0:2,0:2:6.02:0,6,82	0/0:1,0:1:3.01:0,3,50	0/0:8,0:8:24.08:0,24,387	0/0:6,0:6:18.06:0,18,298	1/1:19,0:18:11.77:543,12,0	0/0:13,0:13:39.13:0,39,630	0/0:14,0:14:39.13:0,39,634	0/0:15,0:15:45.15:0,45,744
chr10	84919049	.	AAAT	A	1994.86	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=9.799;DP=405;FS=6.927;HRun=0;HaplotypeScore=93.1385;InbreedingCoeff=0.8223;MQ=76.76;MQ0=4;MQRankSum=-10.429;QD=21.92;ReadPosRankSum=-1.305;VQSLOD=2.9241;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,2:13:3.17:146,3,0	1/1:2,0:2:3:48,3,0	0/0:48,0:23:45.19:0,45,782	0/0:38,0:17:22.30:0,22,197	0/0:18,0:18:54.14:0,54,1118	0/0:21,0:21:63.13:0,63,1252	0/1:11,0:11:3.59:69,0,4	0/0:30,0:30:87.20:0,87,1693	0/0:9,0:9:27.09:0,27,616	1/1:6,5:11:31.34:388,31,0	1/1:9,3:11:30.19:345,30,0	0/0:7,0:7:21.05:0,21,395	0/0:12,0:12:36.09:0,36,707	0/0:5,0:5:15.05:0,15,344	0/0:12,0:12:36.08:0,36,665	1/1:5,4:9:25.89:326,26,0	1/1:13,1:14:18.79:163,19,0	0/0:17,0:16:44.93:0,45,1015	0/0:19,0:19:57.11:0,57,1126	0/0:16,0:16:48.14:0,48,992	0/0:2,0:2:5.99:0,6,89	0/0:1,0:1:3.01:0,3,67	0/0:9,0:9:27.08:0,27,530	0/0:6,0:6:18.06:0,18,386	1/1:13,5:18:56.18:696,56,0	0/0:14,0:14:42.13:0,42,862	0/0:14,0:14:39.10:0,39,810	0/0:15,0:15:45.11:0,45,954
chr10	84919051	.	ATTT	A	1506.33	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=10.454;DP=400;FS=14.756;HRun=3;HaplotypeScore=94.5696;InbreedingCoeff=0.8081;MQ=78.27;MQ0=4;MQRankSum=-10.686;QD=16.74;ReadPosRankSum=-0.016;VQSLOD=-0.5356;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,3:14:16.22:177,16,0	1/1:1,0:1:0.89:2,1,0	0/0:44,0:21:47.67:0,48,669	0/0:36,0:17:17.13:0,17,191	0/0:19,0:19:57.20:0,57,1161	0/0:21,0:21:63.19:0,63,1160	0/1:11,0:11:38.41:51,0,38	0/0:28,0:28:82.84:0,83,924	0/0:10,0:10:30.10:0,30,590	1/1:7,4:11:28.72:241,29,0	1/1:5,7:11:31.96:304,32,0	0/0:7,0:7:21.07:0,21,391	0/0:11,0:11:33.11:0,33,660	0/0:5,0:5:15.05:0,15,304	0/0:12,0:12:36.12:0,36,732	1/1:5,4:9:25.43:213,25,0	1/1:10,4:14:10.09:127,10,0	0/0:16,1:16:44.93:0,45,902	0/0:20,0:20:58.40:0,58,755	0/0:16,0:16:47.79:0,48,556	0/0:2,0:2:5.69:0,6,43	0/0:1,0:1:3.01:0,3,32	0/0:10,0:10:27.01:0,27,527	0/0:6,0:6:18.06:0,18,348	1/1:7,11:17:52.26:575,52,0	0/0:15,0:15:45.15:0,45,901	0/0:14,0:14:38.78:0,39,475	0/0:15,0:15:45.15:0,45,910
chr10	84919053	.	T	TAA	1386.20	PASS	AB=0.967;AC=15;AF=0.268;AN=56;BaseQRankSum=7.333;DP=400;FS=13.107;HRun=0;HaplotypeScore=87.5611;InbreedingCoeff=0.5233;MQ=76.39;MQ0=4;MQRankSum=-7.266;QD=10.91;ReadPosRankSum=1.728;VQSLOD=2.6590;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,1:15:16.44:236,16,0	0/1:1,0:1:0:0,0,0	0/0:43,0:20:29.07:0,29,488	0/0:34,0:16:19.04:0,19,191	0/0:19,0:19:57.19:0,57,919	0/0:19,0:19:55.74:0,56,847	0/1:11,0:11:1.16:1,0,61	0/0:28,0:28:8.55:0,9,233	0/0:10,0:10:30.10:0,30,471	0/1:10,2:12:7.03:242,0,7	1/1:11,2:12:13.16:325,13,0	0/0:7,0:7:21.07:0,21,328	0/0:11,0:11:33.11:0,33,527	0/0:5,0:5:15.05:0,15,244	0/0:12,0:12:36.12:0,36,557	0/1:9,1:10:3.15:188,0,3	1/1:11,4:15:11.46:213,11,0	0/0:17,0:16:45.15:0,45,697	0/0:20,0:20:28.14:0,28,346	0/1:16,0:16:5.16:5,0,111	0/1:3,0:3:1.42:1,0,3	0/0:1,0:1:2.04:0,2,6	0/0:9,0:9:24.08:0,24,390	0/0:7,0:7:21.05:0,21,299	1/1:17,0:17:12.68:322,13,0	0/0:15,0:15:45.15:0,45,718	0/1:13,0:13:13.14:13,0,85	0/0:15,0:15:45.15:0,45,734
chr10	84919054	.	T	TAA	5379.60	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=0.335;DP=407;FS=0.000;HRun=7;HaplotypeScore=75.5291;InbreedingCoeff=0.9098;MQ=74.97;MQ0=4;MQRankSum=-6.409;QD=29.24;ReadPosRankSum=-2.353;VQSLOD=4.2213;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:21.07:303,21,0	1/1:1,0:1:3:27,3,0	0/0:43,0:20:3.06:0,3,193	0/0:33,0:15:13.23:0,13,117	0/0:20,0:20:51.11:0,51,581	0/0:19,0:19:45.09:0,45,501	1/1:3,8:11:21.07:294,21,0	1/1:5,25:30:75.24:1198,75,0	0/0:10,0:10:24.05:0,24,267	1/1:13,0:13:21.06:301,21,0	1/1:14,0:13:27.08:376,27,0	0/0:7,0:7:21.06:0,21,244	0/0:11,0:11:30.09:0,30,349	0/0:5,0:5:15.04:0,15,175	0/0:12,0:12:24.05:0,24,279	1/1:12,0:12:21.03:292,21,0	1/1:16,0:16:20.99:263,21,0	0/0:17,0:16:33.08:0,33,385	1/1:5,12:19:44.60:607,45,0	1/1:6,11:17:42.08:631,42,0	1/1:0,3:3:9.03:147,9,0	1/1:0,1:1:3.01:49,3,0	0/0:8,0:8:24.07:0,24,280	0/0:7,0:7:18.05:0,18,209	1/1:19,0:18:39.09:402,39,0	0/0:15,0:15:36.10:0,36,419	1/1:3,10:13:33.06:490,33,0	0/0:15,0:15:45.13:0,45,524
chr10	84919289	.	GA	G	618.28	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.590;DP=545;FS=12.808;HRun=2;HaplotypeScore=72.0587;InbreedingCoeff=0.9981;MQ=81.18;MQ0=0;MQRankSum=-1.549;QD=34.35;ReadPosRankSum=-1.611;VQSLOD=2.1688;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.30:0,87,1391	0/0:9,0:9:27.09:0,27,431	0/0:19,0:19:42.09:0,42,804	0/0:19,1:20:54.15:0,54,816	0/0:24,0:24:72.25:0,72,1149	0/0:26,0:26:75.26:0,75,1199	1/1:0,18:18:51.17:713,51,0	0/0:25,0:25:72.25:0,72,1151	0/0:18,0:18:54.18:0,54,857	0/0:25,0:25:75.25:0,75,1179	0/0:15,0:15:45.15:0,45,719	0/0:15,0:15:45.15:0,45,717	0/0:12,0:12:36.12:0,36,573	0/0:17,0:17:51.17:0,51,815	0/0:23,0:23:69.17:0,69,1050	0/0:21,0:21:63.21:0,63,1007	0/0:34,0:34:99:0,102,1601	0/0:20,0:20:60.17:0,60,932	0/0:16,0:16:45.15:0,45,702	0/0:20,0:20:57.19:0,57,910	0/0:27,0:27:81.28:0,81,1295	0/0:13,0:13:39.13:0,39,623	0/0:13,0:13:39.12:0,39,596	0/0:15,0:15:45.15:0,45,719	0/0:18,0:18:54.18:0,54,862	0/0:16,0:16:48.16:0,48,767	0/0:27,0:27:81.28:0,81,1288	0/0:10,0:10:30.10:0,30,480
chr10	84919468	.	G	GT	367.38	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.931;DP=618;FS=14.206;HRun=3;HaplotypeScore=62.7704;InbreedingCoeff=0.9950;MQ=90.30;MQ0=0;MQRankSum=-1.999;QD=28.26;ReadPosRankSum=1.850;VQSLOD=1.9895;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.24:0,96,1123	0/0:10,0:10:30.09:0,30,360	0/0:22,0:22:60.16:0,60,685	0/0:30,0:30:68.71:0,69,779	0/0:17,0:17:48.15:0,48,576	0/0:19,0:19:57.17:0,57,684	0/0:30,0:30:87.27:0,87,1044	0/0:31,0:31:90.24:0,90,1055	0/0:23,0:23:60.17:0,60,709	0/0:22,0:22:63.03:0,63,728	0/0:19,0:19:57.17:0,57,683	0/0:12,0:12:36.11:0,36,430	0/0:25,0:25:72.19:0,72,840	0/0:17,0:17:48.13:0,48,564	0/0:23,0:23:63.19:0,63,756	0/0:20,0:20:54.13:0,54,623	0/0:37,0:37:99:0,108,1284	0/0:20,0:20:54.16:0,54,647	0/0:17,0:17:51.15:0,51,602	0/0:30,0:30:84.23:0,84,984	0/0:36,0:36:99:0,105,1260	0/0:26,0:26:72.18:0,72,837	0/0:13,0:13:39.12:0,39,468	0/0:19,0:19:51.16:0,51,612	1/1:0,13:13:33.11:462,33,0	0/0:22,0:22:63.19:0,63,756	0/0:23,0:23:60.17:0,60,708	0/0:8,0:8:21.06:0,21,246
chr10	84920017	.	C	CG	147.26	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.705;DP=330;FS=0.000;HRun=0;HaplotypeScore=52.5336;InbreedingCoeff=0.8579;MQ=98.94;MQ0=2;MQRankSum=-2.272;QD=29.45;ReadPosRankSum=0.029;VQSLOD=3.2633;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.12:0,45,605	0/0:4,0:4:12.04:0,12,163	0/0:17,0:15:41.18:0,41,488	0/0:35,0:30:71.84:0,72,903	0/0:11,0:11:27.05:0,27,355	0/0:8,0:8:18.06:0,18,251	0/0:18,0:18:53.82:0,54,655	0/0:9,0:9:24.08:0,24,338	0/0:6,0:6:18.06:0,18,251	0/0:10,0:10:30.07:0,30,383	0/0:6,0:6:17.91:0,18,198	0/0:13,0:13:36.12:0,36,502	0/0:11,0:11:33.11:0,33,449	0/0:10,0:10:24.04:0,24,312	0/0:10,0:10:18.02:0,18,229	0/0:10,0:10:30.10:0,30,413	0/0:17,0:17:51.17:0,51,711	0/0:8,0:8:21.03:0,21,272	0/0:9,0:8:17.87:0,18,230	0/0:11,0:11:21.04:0,21,267	0/0:31,0:31:48.12:0,48,632	0/0:8,0:8:18.06:0,18,251	0/0:9,0:9:24.04:0,24,311	0/0:9,0:9:27.09:0,27,377	1/1:0,5:5:15.05:236,15,0	0/0:14,0:14:39.13:0,39,545	0/0:9,0:9:15.05:0,15,205	0/0:4,0:4:12.04:0,12,168
chr10	84920034	.	TTTC	T	944.76	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.402;DP=258;FS=52.015;HRun=0;HaplotypeScore=42.4869;InbreedingCoeff=0.7864;MQ=82.38;MQ0=6;MQRankSum=-2.127;QD=14.76;ReadPosRankSum=0.864;VQSLOD=1.4346;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:7:18.06:0,18,288	0/0:1,0:1:3.01:0,3,53	0/0:23,0:10:8.83:0,9,186	0/0:28,0:19:13.53:0,14,391	0/0:8,0:8:21:0,21,241	0/0:3,0:3:6.02:0,6,100	0/0:12,0:12:36.09:0,36,651	1/1:4,3:7:18.03:258,18,0	0/0:5,0:4:11.99:0,12,125	0/0:10,0:10:30.08:0,30,550	0/0:4,0:4:12.04:0,12,189	0/0:10,0:10:21.05:0,21,352	0/0:7,0:7:4.69:0,5,218	0/0:8,0:8:20.32:0,20,258	0/0:9,0:9:21.12:0,21,288	0/0:7,0:7:21.06:0,21,336	0/0:20,0:19:51.12:0,51,873	0/0:6,0:6:15.05:0,15,292	1/1:1,3:4:9.03:158,9,0	1/1:0,8:8:6.02:74,6,0	1/1:2,27:29:20.25:340,20,0	1/1:1,6:7:6.02:92,6,0	0/0:4,0:4:12.01:0,12,130	0/0:5,0:5:8.82:0,9,120	0/0:2,0:2:6.02:0,6,103	0/0:8,0:8:21.05:0,21,310	1/1:0,9:9:14.88:191,15,0	0/0:6,0:5:15.05:0,15,270
chr10	84920656	.	GT	G	162.77	PASS	AC=6;AF=0.158;AN=38;BaseQRankSum=2.772;DP=261;FS=0.000;HRun=2;HaplotypeScore=29.1153;InbreedingCoeff=0.4360;MQ=19.34;MQ0=164;MQRankSum=-2.036;QD=8.57;ReadPosRankSum=0.250;VQSLOD=0.8165;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,4:3:9.03:116,9,0	0/0:3,0:1:3.01:0,3,45	./.	./.	0/0:18,0:14:23.91:0,24,259	0/0:14,0:4:9.03:0,9,135	1/1:2,6:2:3.01:38,3,0	./.	0/0:9,0:5:3.01:0,3,45	0/0:12,0:8:21.07:0,21,305	0/0:9,0:6:5.84:0,6,65	0/0:7,0:1:3.01:0,3,45	0/0:9,0:6:5.85:0,6,89	0/0:13,0:5:6.02:0,6,85	./.	0/0:7,0:1:3.01:0,3,45	./.	./.	./.	0/0:11,0:8:21.07:0,21,314	./.	0/0:12,0:5:3.01:0,3,45	0/0:14,0:10:15.52:0,16,225	./.	1/1:0,6:5:9.03:117,9,0	0/0:11,0:3:9.03:0,9,130	0/0:5,0:1:3.01:0,3,45	0/0:7,0:4:3.01:0,3,45
chr10	84920894	.	GGA	G	391.54	PASS	AB=0.992;AC=13;AF=0.232;AN=56;BaseQRankSum=5.525;DP=432;FS=14.421;HRun=0;HaplotypeScore=69.3254;InbreedingCoeff=0.5985;MQ=44.18;MQ0=28;MQRankSum=-4.207;QD=3.84;ReadPosRankSum=0.823;VQSLOD=0.1922;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:16:12.08:77,0,12	1/1:0,3:3:8.91:76,9,0	0/0:36,0:6:12.02:0,12,147	0/1:41,1:6:9.61:10,0,30	0/0:31,0:30:83.63:0,84,1147	0/0:24,0:24:59.82:0,60,987	0/0:5,0:4:6.43:0,6,49	0/0:11,0:8:21.07:0,21,297	0/0:7,0:7:17.94:0,18,278	1/1:6,3:9:17.76:157,18,0	1/1:8,2:10:17.71:129,18,0	0/0:10,0:10:30.02:0,30,522	0/0:15,0:15:32.95:0,33,449	0/0:18,0:18:45.02:0,45,782	0/0:18,0:18:47.96:0,48,799	1/1:0,3:3:5.97:56,6,0	1/1:9,0:8:2.07:41,2,0	0/0:32,0:31:78.12:0,78,1413	0/0:4,0:4:10.76:0,11,102	0/0:14,0:13:27.67:0,28,248	0/0:10,0:10:21.52:0,22,139	0/0:9,0:9:11.42:0,11,89	0/0:19,0:16:42.01:0,42,695	0/0:20,0:20:54.08:0,54,955	0/1:6,0:5:9.52:10,0,27	0/0:22,0:22:63.09:0,63,999	0/0:9,0:8:17.15:0,17,111	0/0:16,0:13:39.01:0,39,629
chr10	84920895	.	GAAAAAAAAAGGAAAAA	G	2350.31	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=3.411;DP=466;FS=45.851;HRun=0;HaplotypeScore=161.8835;InbreedingCoeff=0.6932;MQ=43.15;MQ0=29;MQRankSum=-5.451;QD=42.73;ReadPosRankSum=3.394;VQSLOD=1.5531;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:16:21.07:0,21,921	0/0:3,0:3:9.03:0,9,353	0/0:36,0:6:15.50:0,16,520	0/0:48,0:6:6.18:0,6,225	0/0:33,0:33:75.21:0,75,4301	0/0:23,0:24:51.16:0,51,2981	0/0:7,0:5:9.02:0,9,487	0/1:10,0:8:65.41:333,0,65	0/0:9,0:9:21.07:0,21,1400	0/0:9,0:9:21.07:0,21,594	0/0:10,0:10:6.02:0,6,147	0/0:11,0:11:33.11:0,33,1832	0/0:16,0:16:42.14:0,42,2324	0/0:18,0:18:42.14:0,42,2393	0/0:22,0:22:54.18:0,54,3040	0/0:4,0:3:6.02:0,6,188	0/0:12,0:10:6.02:0,6,259	0/0:32,0:31:69.22:0,69,3402	1/1:3,1:4:3.01:131,3,0	1/1:6,8:13:18.02:613,18,0	1/1:6,3:9:6.02:262,6,0	1/1:2,7:9:9.03:394,9,0	0/0:21,0:18:40.68:0,41,1839	0/0:20,0:20:48.16:0,48,2854	0/0:7,0:6:12.04:0,12,566	0/0:26,0:26:66.20:0,66,3582	1/1:3,4:8:20.66:777,21,0	0/0:18,0:15:36.12:0,36,1766
chr10	84920904	.	A	AAG	341.97	PASS	AB=0.984;AC=10;AF=0.179;AN=56;BaseQRankSum=5.397;DP=523;FS=19.262;HRun=0;HaplotypeScore=83.7376;InbreedingCoeff=0.1717;MQ=52.23;MQ0=30;MQRankSum=-3.108;QD=2.59;ReadPosRankSum=0.145;VQSLOD=0.1643;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:25.38:0,25,142	0/1:3,0:3:11.05:18,0,11	0/0:75,0:15:18.16:0,18,147	0/1:69,0:16:2.48:2,0,84	0/0:34,0:34:66.92:0,67,893	0/0:22,0:22:56.99:0,57,703	0/0:6,0:4:3.89:0,4,19	1/1:3,7:7:9.65:251,10,0	0/0:7,0:7:20.87:0,21,224	0/0:19,0:19:14.51:0,15,161	0/1:8,0:8:12.39:14,0,12	0/0:13,0:13:38.87:0,39,437	0/0:17,0:17:47.54:0,48,440	0/0:16,0:16:44.67:0,45,527	0/0:20,0:20:55.81:0,56,615	0/1:6,0:5:5.27:5,0,10	0/1:12,0:10:2.03:5,0,2	0/0:34,0:33:80.91:0,81,1000	0/0:1,0:1:2.50:0,2,9	0/1:9,0:8:11.17:92,0,11	0/1:3,0:3:3.68:35,0,4	0/0:7,0:7:7.49:0,7,27	0/0:19,0:16:38.90:0,39,477	0/0:27,0:27:71.84:0,72,804	0/0:6,0:5:8.29:0,8,26	0/0:29,0:29:83.90:0,84,932	0/1:7,1:7:24.94:54,0,25	0/0:19,0:16:37.99:0,38,455
chr10	84920905	.	G	GAACA	575.57	PASS	AB=0.986;AC=13;AF=0.232;AN=56;BaseQRankSum=7.178;DP=534;FS=17.369;HRun=0;HaplotypeScore=101.3038;InbreedingCoeff=0.6073;MQ=52.03;MQ0=30;MQRankSum=-5.241;QD=6.62;ReadPosRankSum=-2.245;VQSLOD=0.4803;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:20:26.48:89,0,26	1/1:1,1:3:8.05:80,8,0	0/0:77,0:16:17.03:0,17,248	0/0:75,0:17:1.38:0,1,182	0/0:33,0:33:94.49:0,94,1630	0/0:22,0:22:58.75:0,59,1117	0/1:7,0:5:11.89:12,0,12	0/0:10,0:7:17.94:0,18,200	0/0:7,0:7:21.01:0,21,340	1/1:18,1:19:22.01:231,22,0	1/1:7,1:8:10.28:73,10,0	0/0:13,0:13:36.52:0,37,626	0/0:17,0:17:48.16:0,48,823	0/0:16,0:16:45.13:0,45,840	0/0:20,0:20:57.16:0,57,996	1/1:3,1:8:7.83:90,8,0	0/1:12,0:10:3.10:34,0,3	0/0:33,0:32:81.25:0,81,1467	0/0:1,0:1:3:0,3,28	0/0:9,0:8:14.96:0,15,135	0/0:3,0:3:6.01:0,6,55	0/0:7,0:7:9.01:0,9,84	0/0:19,0:16:39.10:0,39,735	0/0:28,0:28:70.48:0,70,1354	1/1:6,0:6:12.03:136,12,0	0/0:28,0:28:84.28:0,84,1587	0/0:7,0:7:21.03:0,21,204	0/0:20,0:17:44.98:0,45,782
chr10	84920907	.	A	AC	88.20	PASS	AB=0.995;AC=9;AF=0.161;AN=56;BaseQRankSum=6.210;DP=567;FS=35.345;HRun=0;HaplotypeScore=92.9247;InbreedingCoeff=0.2066;MQ=51.26;MQ0=30;MQRankSum=-5.069;QD=0.82;ReadPosRankSum=-1.099;VQSLOD=-0.3967;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,1:24:42.92:43,0,74	0/1:4,0:4:0.93:1,0,7	0/0:78,0:15:20.47:0,20,209	0/0:79,0:19:14.76:0,15,216	0/0:33,0:33:84.52:0,85,1029	0/0:22,0:22:60.12:0,60,736	0/1:7,0:5:11.76:12,0,16	0/0:10,0:7:13.97:0,14,74	0/0:8,0:8:21.06:0,21,248	0/1:21,0:21:24.47:39,0,24	0/1:11,0:11:0.38:0,0,3	0/0:15,0:15:39.08:0,39,462	0/0:19,0:19:47.97:0,48,527	0/0:15,0:15:42.06:0,42,424	0/0:20,0:20:57.04:0,57,619	0/1:13,0:12:3.63:4,0,5	0/1:18,0:16:2.85:3,0,28	0/0:33,0:32:80.95:0,81,872	0/0:1,0:1:2.22:0,2,7	0/0:9,0:8:10.50:0,11,34	0/0:3,0:3:4.44:0,4,15	0/0:7,0:7:6.66:0,7,22	0/0:19,0:16:39.02:0,39,413	0/0:28,0:28:75.17:0,75,904	1/1:3,4:6:12:107,12,0	0/0:32,0:32:87.08:0,87,1000	0/0:8,0:7:15.84:0,16,54	0/0:20,0:17:48.88:0,49,511
chr10	84920921	.	A	AAGGG	673.52	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.554;DP=602;FS=34.760;HRun=0;HaplotypeScore=117.6168;InbreedingCoeff=0.9586;MQ=58.25;MQ0=22;MQRankSum=-3.804;QD=33.68;ReadPosRankSum=-1.109;VQSLOD=1.7500;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:55.33:0,55,819	0/0:4,0:4:11.97:0,12,132	0/0:82,0:21:43.57:0,44,574	0/0:84,0:23:13.87:0,14,445	0/0:33,0:33:95.94:0,96,1364	0/0:21,0:21:57.11:0,57,901	1/1:6,0:9:27.09:410,27,0	0/0:17,0:16:45.11:0,45,659	0/0:9,0:9:27.09:0,27,426	0/0:21,0:21:59.17:0,59,660	0/0:10,0:10:18.45:0,18,215	0/0:15,0:15:42.02:0,42,621	0/0:20,0:20:54.14:0,54,882	0/0:15,0:15:28.74:0,29,615	0/0:18,0:18:47.98:0,48,729	0/0:14,0:13:26.68:0,27,299	0/0:23,0:21:23.54:0,24,444	0/0:30,0:29:69.14:0,69,1091	0/0:9,0:8:24.08:0,24,360	0/0:14,0:13:26.74:0,27,338	0/0:8,0:8:20.86:0,21,281	0/0:13,0:13:27.09:0,27,396	0/0:18,0:17:38.68:0,39,580	0/0:26,0:26:72.14:0,72,1140	1/1:2,4:9:18.06:383,18,0	0/0:29,0:29:80.71:0,81,1250	0/0:10,0:10:29.93:0,30,371	0/0:12,0:12:36.10:0,36,558
chr10	84921331	.	TA	T	7552.79	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=12.078;DP=585;FS=0.000;HRun=7;HaplotypeScore=60.6030;InbreedingCoeff=0.9985;MQ=78.82;MQ0=0;MQRankSum=-1.302;QD=26.32;ReadPosRankSum=-0.576;VQSLOD=5.0815;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:26:65.17:649,65,0	1/1:0,12:12:23.92:245,24,0	0/0:14,0:14:24.04:0,24,275	0/0:15,0:15:42.06:0,42,472	0/0:20,0:20:60.18:0,60,742	0/0:22,0:22:63.20:0,63,787	0/0:25,0:25:69.20:0,69,853	1/1:2,26:28:75.12:743,75,0	0/0:19,0:19:48.15:0,48,604	1/1:7,16:23:51.09:515,51,0	1/1:0,11:11:24.05:244,24,0	0/0:28,0:28:84.27:0,84,1057	0/0:13,0:13:36.11:0,36,452	0/0:29,0:29:84.24:0,84,1021	0/0:17,0:17:51.16:0,51,642	1/1:0,16:16:45.10:459,45,0	1/1:2,50:52:99:1439,141,0	0/0:22,0:22:57.16:0,57,699	1/1:1,18:19:54.12:551,54,0	1/1:2,21:23:60.13:612,60,0	1/1:1,28:29:84.19:857,84,0	1/1:2,19:21:54.11:550,54,0	0/0:12,0:12:30.10:0,30,377	0/0:22,0:22:60.18:0,60,743	1/1:0,17:17:48.11:490,48,0	0/0:21,1:22:54.17:0,54,679	1/1:3,7:10:20.94:199,21,0	0/0:18,0:17:54.17:0,54,678
chr10	84922358	.	C	CT	10295.90	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=1.900;DP=657;FS=0.599;HRun=2;HaplotypeScore=80.7960;InbreedingCoeff=0.9978;MQ=89.67;MQ0=0;MQRankSum=-4.542;QD=28.92;ReadPosRankSum=-0.646;VQSLOD=4.3063;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:45,0:45:99:1036,129,0	1/1:13,0:13:38.85:299,39,0	0/0:16,0:16:43.38:0,43,522	0/0:35,0:35:90.17:0,90,1073	0/0:24,0:24:69.22:0,69,854	0/0:18,0:18:54.17:0,54,669	1/1:28,0:28:77.71:600,78,0	1/1:1,42:43:99:1611,117,0	0/0:18,0:18:48.15:0,48,595	1/1:15,0:15:44.56:309,45,0	1/1:27,0:27:74.74:582,75,0	0/0:22,0:22:66.19:0,66,806	0/0:21,0:21:63.20:0,63,781	0/0:24,0:24:72.23:0,72,892	0/0:25,0:25:75.22:0,75,917	1/1:18,0:18:50.81:391,51,0	1/1:32,0:32:15.42:594,15,0	0/0:10,0:10:27.08:0,27,335	1/1:1,17:19:57.19:816,57,0	1/1:1,26:27:69.23:993,69,0	1/1:0,32:32:87.29:1253,87,0	1/1:2,19:21:54.18:778,54,0	0/0:20,0:20:54.17:0,54,661	0/0:24,0:24:69.22:0,69,855	1/1:15,0:15:38.86:301,39,0	0/0:26,0:26:72.23:0,72,893	1/1:0,21:21:50.77:734,51,0	0/0:18,0:18:51.16:0,51,632
chr10	84922359	.	T	TA	10738.88	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-1.689;DP=659;FS=0.920;HRun=0;HaplotypeScore=75.6219;InbreedingCoeff=0.9864;MQ=90.12;MQ0=0;MQRankSum=-2.352;QD=30.17;ReadPosRankSum=0.703;VQSLOD=4.7700;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,45:47:99:2062,129,0	1/1:2,13:15:39.13:624,39,0	0/0:17,0:17:48.12:0,48,636	0/0:35,0:35:96.19:0,96,1266	0/0:25,0:25:69.23:0,69,965	0/0:18,0:18:54.18:0,54,755	1/1:0,29:29:78.27:1247,78,0	1/1:43,0:43:73.96:495,74,0	0/0:18,0:18:54.15:0,54,721	1/1:0,15:15:45.15:720,45,0	1/1:0,25:25:75.26:1199,75,0	0/0:22,0:22:66.22:0,66,923	0/0:21,0:21:63.21:0,63,881	0/0:25,0:25:72.24:0,72,1007	0/0:25,0:25:75.25:0,75,1049	1/1:0,18:18:51.17:815,51,0	1/1:2,29:31:6.38:1259,6,0	0/0:10,0:10:27.09:0,27,378	1/1:18,0:18:51.97:290,52,0	1/1:26,0:26:49.12:370,49,0	1/1:32,0:32:84.59:498,85,0	1/1:20,0:20:29.14:257,29,0	0/0:20,0:20:57.18:0,57,780	0/0:24,0:24:72.23:0,72,991	1/1:2,14:16:39.13:624,39,0	0/0:25,0:25:75.24:0,75,1035	1/1:21,0:21:49.02:279,49,0	0/0:18,0:18:54.17:0,54,738
chr10	84922436	.	A	AT	408.44	PASS	AB=0.629;AC=1;AF=0.018;AN=56;BaseQRankSum=-5.074;DP=597;FS=0.890;HRun=8;HaplotypeScore=68.4299;InbreedingCoeff=0.5981;MQ=82.24;MQ0=0;MQRankSum=-3.232;QD=18.57;ReadPosRankSum=-0.839;VQSLOD=3.3153;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:99:0,117,1066	0/0:12,0:12:29.95:0,30,257	0/0:16,0:16:15.11:0,15,228	0/0:17,0:17:37.60:0,38,312	0/0:26,0:26:69.03:0,69,631	0/0:26,0:26:71.96:0,72,641	0/1:9,13:22:0.84:483,0,1	0/0:29,0:29:65.98:0,66,592	0/0:18,0:18:48.02:0,48,439	0/0:20,0:20:57.03:0,57,522	0/0:17,0:17:35.99:0,36,324	0/0:21,0:21:63.03:0,63,577	0/0:17,0:17:41.98:0,42,374	0/0:22,0:22:57.07:0,57,534	0/0:21,0:21:54.01:0,54,490	0/0:18,0:18:44.89:0,45,412	0/0:20,0:20:48.02:0,48,439	0/0:18,0:18:48.02:0,48,439	0/0:14,0:14:33.01:0,33,302	0/0:33,0:33:90.03:0,90,818	0/0:24,0:24:66.03:0,66,604	0/0:20,0:20:41.99:0,42,379	0/0:20,0:20:57.03:0,57,521	0/0:16,0:16:38.99:0,39,352	0/0:21,0:21:63.03:0,63,576	0/0:23,0:22:63.01:0,63,568	0/0:31,0:31:81.04:0,81,741	0/0:12,0:12:36.02:0,36,329
chr10	84922509	.	AT	A	6585.67	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=13.955;DP=540;FS=5.008;HRun=9;HaplotypeScore=56.7944;InbreedingCoeff=0.9962;MQ=70.00;MQ0=0;MQRankSum=-0.626;QD=23.77;ReadPosRankSum=0.177;VQSLOD=5.6874;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:25:74.97:671,75,0	1/1:1,11:12:30.01:274,30,0	0/0:8,0:8:20.90:0,21,199	0/0:11,0:11:14.32:0,14,202	0/0:31,0:31:90.25:0,90,1022	0/0:18,0:18:51.15:0,51,588	1/1:2,16:18:42.02:384,42,0	1/1:4,31:35:66.56:759,67,0	0/0:13,0:13:33.10:0,33,381	1/1:3,21:24:62.52:558,63,0	1/1:0,16:16:39.01:357,39,0	0/0:18,0:18:48.14:0,48,554	0/0:17,0:17:42.11:0,42,474	0/0:22,0:22:60.14:0,60,662	0/0:19,0:19:57.14:0,57,644	1/1:1,13:14:33.02:302,33,0	1/1:2,21:23:60.02:549,60,0	0/0:15,0:15:45.13:0,45,519	1/1:5,20:25:59.71:545,60,0	1/1:0,25:25:74.96:676,75,0	1/1:2,18:20:51.03:467,51,0	1/1:0,17:17:51.03:466,51,0	0/0:21,0:21:57.17:0,57,658	0/0:15,0:15:42.12:0,42,485	0/0:22,0:22:60.17:0,60,685	0/0:19,0:18:22.05:0,22,453	1/1:0,22:22:63.03:576,63,0	0/0:14,0:14:36.08:0,36,394
chr10	84923334	.	A	ATT	4963.47	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.240;DP=611;FS=3.450;HRun=8;HaplotypeScore=87.8285;InbreedingCoeff=0.9410;MQ=82.60;MQ0=3;MQRankSum=1.730;QD=38.18;ReadPosRankSum=0.581;VQSLOD=4.6331;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.15:0,66,725	1/1:3,12:14:30.10:476,30,0	0/0:38,0:33:22.23:0,22,499	0/0:23,0:17:6.53:0,7,239	0/0:30,0:30:84.20:0,84,927	0/0:24,0:24:57.12:0,57,625	0/0:21,0:21:57.13:0,57,625	0/0:29,0:29:78.14:0,78,838	0/0:20,0:20:60.16:0,60,669	1/1:4,28:32:87.28:1351,87,0	1/1:2,16:19:48.12:734,48,0	0/0:19,0:19:54.12:0,54,592	0/0:9,0:9:27.07:0,27,300	0/0:24,0:24:60.15:0,60,668	0/0:18,0:18:51.13:0,51,568	1/1:1,22:23:54.18:857,54,0	1/1:2,24:25:66.20:1021,66,0	0/0:12,0:11:33.09:0,33,367	0/0:16,0:16:43.93:0,44,472	0/0:28,0:28:66.16:0,66,735	0/0:6,0:6:6:0,6,67	0/0:25,0:25:72.18:0,72,805	0/0:22,0:22:60.15:0,60,659	0/0:20,0:20:54.10:0,54,581	1/1:2,13:15:33.11:524,33,0	0/0:19,1:20:6.51:0,7,521	0/0:35,0:35:90.19:0,90,979	0/0:14,0:14:36.06:0,36,381
chr10	84923376	.	C	CAGCGGTCAA	14276.91	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-5.456;DP=621;FS=1.240;HRun=0;HaplotypeScore=173.3470;InbreedingCoeff=0.9867;MQ=83.95;MQ0=2;MQRankSum=-14.518;QD=89.23;ReadPosRankSum=-3.329;VQSLOD=3.9254;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.28:0,81,2308	0/0:15,0:14:39.13:0,39,1093	0/0:25,0:26:54.41:0,54,1492	0/0:21,0:19:27:0,27,762	0/0:30,0:30:75.24:0,75,2135	0/0:22,0:21:51.16:0,51,1430	0/0:22,0:22:60.19:0,60,1695	1/1:23,14:38:87.25:3185,87,0	0/0:16,0:16:36.12:0,36,1013	0/0:28,0:28:72.24:0,72,2033	0/0:19,0:19:42.13:0,42,1111	0/0:21,0:21:57.19:0,57,1621	0/0:9,0:9:21.07:0,21,616	0/0:24,0:24:66.21:0,66,1866	0/0:22,0:22:57.20:0,57,1670	0/0:22,0:22:54.19:0,54,1517	0/0:25,0:24:69.22:0,69,1900	0/0:13,0:13:36.10:0,36,952	1/1:17,8:27:56.97:2047,57,0	1/1:5,15:22:60.08:2298,60,0	1/1:9,5:15:23.93:630,24,0	1/1:14,12:26:60.12:2276,60,0	0/0:22,0:22:51.15:0,51,1369	0/0:32,0:32:87.30:0,87,2427	0/0:15,0:15:33.11:0,33,939	0/0:23,0:23:60.19:0,60,1636	1/1:9,22:31:84.29:3842,84,0	0/0:4,0:4:9.03:0,9,264
chr10	84923678	.	ACCTC	A	709.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.826;DP=483;FS=0.940;HRun=0;HaplotypeScore=89.3605;InbreedingCoeff=0.9420;MQ=82.26;MQ0=1;MQRankSum=-1.277;QD=35.45;ReadPosRankSum=-1.214;VQSLOD=3.0332;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:93.25:0,93,1169	0/0:8,0:8:24.08:0,24,578	0/0:29,0:27:59.34:0,59,1233	0/0:32,0:24:25.16:0,25,829	0/0:20,0:20:57.18:0,57,1315	0/0:22,0:22:63.12:0,63,1366	1/1:0,20:20:42.14:804,42,0	0/0:12,0:12:33.05:0,33,493	0/0:5,0:5:15.04:0,15,321	0/0:10,0:10:27.08:0,27,554	0/0:8,0:8:21.06:0,21,455	0/0:18,0:18:47.51:0,48,1045	0/0:18,0:18:51.12:0,51,1144	0/0:13,0:13:39.12:0,39,928	0/0:22,0:22:66.19:0,66,1528	0/0:17,0:17:51.17:0,51,1266	0/0:31,0:31:78.21:0,78,1763	0/0:8,0:8:24.05:0,24,521	0/0:19,0:19:42.12:0,42,854	0/0:13,0:13:36.11:0,36,825	0/0:13,0:13:39.11:0,39,894	0/0:9,0:9:24.07:0,24,506	0/0:11,0:11:27.55:0,28,602	0/0:25,0:26:75.21:0,75,1810	0/0:13,0:13:30.07:0,30,356	0/0:21,0:21:57.17:0,57,1301	0/0:20,0:20:57.14:0,57,1268	0/0:5,0:5:12:0,12,203
chr10	84923681	.	TC	T	935.34	PASS	AB=0.938;AC=9;AF=0.161;AN=56;BaseQRankSum=5.727;DP=494;FS=3.849;HRun=10;HaplotypeScore=65.2701;InbreedingCoeff=0.5211;MQ=85.12;MQ0=2;MQRankSum=-0.572;QD=7.31;ReadPosRankSum=-1.388;VQSLOD=1.5766;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:6,30:37:83.97:729,84,0	0/0:9,0:9:18.05:0,18,199	0/0:37,1:32:45.59:0,46,408	0/1:32,1:24:15.08:15,0,169	0/0:17,3:20:18.12:0,18,457	0/0:23,0:23:48.13:0,48,530	1/1:20,0:20:30.28:93,30,0	0/0:14,0:14:7.61:0,8,75	0/0:5,0:5:9.02:0,9,100	0/0:11,0:11:18.04:0,18,191	0/0:8,0:8:18.02:0,18,187	0/0:16,1:17:13.06:0,13,372	0/0:18,0:18:45.11:0,45,486	0/0:15,0:15:39.11:0,39,431	0/0:22,0:22:51.14:0,51,561	0/0:16,1:17:25.08:0,25,504	0/0:33,0:33:24.82:0,25,692	0/0:7,1:8:3.13:0,3,168	0/1:13,3:16:36.91:37,0,267	0/0:12,1:13:7.03:0,7,297	0/0:15,0:15:33.07:0,33,355	0/1:9,0:9:7.64:8,0,147	0/0:11,0:11:24.52:0,25,256	0/0:25,0:25:69.01:0,69,736	1/1:2,11:13:23.99:208,24,0	0/0:21,0:21:48.13:0,48,529	0/0:20,0:20:45.12:0,45,496	0/0:3,0:3:6.02:0,6,66
chr10	84924041	.	T	TG	412.53	PASS	AB=0.941;AC=4;AF=0.071;AN=56;BaseQRankSum=-3.378;DP=301;FS=0.906;HRun=8;HaplotypeScore=49.3223;InbreedingCoeff=0.3753;MQ=81.01;MQ0=0;MQRankSum=0.799;QD=11.15;ReadPosRankSum=-1.513;VQSLOD=1.6323;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:75.03:0,75,686	0/0:1,0:1:3:0,3,27	0/1:13,1:13:31.72:32,0,129	0/0:16,0:16:10.90:0,11,203	0/0:7,0:7:15:0,15,137	0/0:8,0:8:17.99:0,18,160	1/1:1,14:15:42.12:485,42,0	0/0:12,0:12:33.02:0,33,301	0/0:11,0:11:27.01:0,27,247	0/0:6,0:6:15:0,15,133	0/0:4,0:4:12.01:0,12,110	0/0:11,0:11:23.99:0,24,212	0/0:14,0:14:27:0,27,245	0/1:7,0:7:6.36:6,0,144	0/0:6,0:6:15.01:0,15,137	0/0:13,0:13:33:0,33,301	0/0:24,0:24:69.03:0,69,630	0/0:14,0:14:30.01:0,30,275	0/0:19,0:19:41.98:0,42,379	0/0:3,0:3:9:0,9,82	0/0:12,0:12:29.99:0,30,274	0/0:4,0:4:12.01:0,12,110	0/0:4,0:4:11.99:0,12,105	0/0:10,0:10:24.01:0,24,220	0/0:6,0:6:18.01:0,18,165	0/0:9,0:9:18.01:0,18,165	0/0:12,0:12:27.01:0,27,247	0/0:7,0:7:18.01:0,18,164
chr10	84924772	.	G	GC	2907.67	PASS	AB=0.747;AC=30;AF=0.536;AN=56;BaseQRankSum=-0.407;DP=409;FS=4.044;HRun=9;HaplotypeScore=50.2335;InbreedingCoeff=0.7925;MQ=77.35;MQ0=0;MQRankSum=-1.742;QD=14.69;ReadPosRankSum=-0.406;VQSLOD=3.3713;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:47.03:428,47,0	1/1:0,0:1:2.84:14,3,0	0/0:11,0:11:12.46:0,12,106	0/0:12,0:12:15.52:0,16,98	0/0:7,0:7:21:0,21,182	0/0:13,0:13:26.98:0,27,234	1/1:4,16:20:48.13:531,48,0	1/1:9,7:16:15.03:157,15,0	0/0:18,0:18:44.98:0,45,390	1/1:2,0:5:8.52:43,9,0	1/1:0,0:2:5.68:28,6,0	0/0:21,1:23:53.01:0,53,449	0/0:3,0:3:9:0,9,78	0/0:13,0:13:32.98:0,33,287	0/1:11,1:12:3.23:3,0,197	1/1:4,1:15:28.48:158,28,0	1/1:7,1:20:31.37:174,31,0	0/0:49,1:50:95.75:0,96,1054	1/1:4,12:16:36.08:389,36,0	1/1:0,8:8:18.52:200,19,0	1/1:3,19:22:42.11:465,42,0	0/1:2,6:8:11.02:118,0,11	0/0:9,0:9:23.98:0,24,205	0/0:40,1:42:64.79:0,65,775	1/1:3,0:6:2.88:15,3,0	0/0:10,0:10:23.99:0,24,208	1/1:1,8:9:15.04:166,15,0	1/1:1,9:10:21.06:232,21,0
chr10	84924780	.	C	CA	1130.83	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=5.521;DP=409;FS=0.000;HRun=0;HaplotypeScore=56.2332;InbreedingCoeff=0.3189;MQ=73.43;MQ0=0;MQRankSum=-0.299;QD=7.91;ReadPosRankSum=2.405;VQSLOD=3.0690;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:31:57.90:928,58,0	0/0:1,0:1:2.50:0,2,9	0/0:8,0:8:24.06:0,24,284	0/0:11,0:11:29.31:0,29,278	0/0:7,0:7:21.07:0,21,281	0/0:14,0:14:30.08:0,30,398	0/1:25,0:25:85.02:85,0,140	0/1:11,0:11:15.63:24,0,16	0/0:17,0:17:48.13:0,48,634	0/0:5,0:5:10.80:0,11,58	0/0:4,0:4:11.10:0,11,75	0/0:23,0:23:65.98:0,66,820	0/0:4,0:4:12.01:0,12,147	0/0:14,0:14:42.07:0,42,513	0/0:10,0:10:22.93:0,23,362	0/0:15,0:15:26.51:0,27,156	0/0:23,0:23:40.54:0,41,276	0/0:52,0:52:99:0,140,1878	0/1:16,0:16:33.31:42,0,33	0/1:9,0:9:8.43:45,0,8	1/1:23,0:23:6.37:72,6,0	0/1:9,0:9:12.34:12,0,46	0/0:9,0:9:27.08:0,27,355	0/0:36,0:36:94.98:0,95,1325	0/0:4,0:4:2.87:0,3,15	0/0:9,0:9:27.07:0,27,350	0/1:9,0:9:10.49:29,0,10	1/1:10,0:10:16.09:54,16,0
chr10	84924869	.	TCGAAGGCACTTCCCTGGG	T	1912.22	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.925;DP=535;FS=0.000;HRun=0;HaplotypeScore=254.8250;InbreedingCoeff=0.9616;MQ=83.32;MQ0=0;MQRankSum=-6.022;QD=79.68;ReadPosRankSum=1.115;VQSLOD=2.4611;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,7832	0/0:5,0:5:15.05:0,15,1193	0/0:15,0:15:36.12:0,36,2263	0/0:24,0:24:65.24:0,65,4205	0/0:11,0:11:30.10:0,30,2010	0/0:18,0:18:51.18:0,51,4341	1/1:1,23:24:39.13:2007,39,0	0/0:22,0:22:63.21:0,63,4094	0/0:10,0:10:30.09:0,30,2400	0/0:15,0:15:45.15:0,45,3234	0/0:16,0:16:48.10:0,48,3140	0/0:32,0:32:90.31:0,90,7074	0/0:9,0:9:27.09:0,27,1887	0/0:17,0:17:51.18:0,51,3977	0/0:11,0:11:33.11:0,33,2838	0/0:11,0:11:33.10:0,33,2477	0/0:57,0:57:99:0,172,13350	0/0:28,0:28:84.20:0,84,5700	0/0:18,0:18:51.17:0,51,3533	0/0:12,0:12:36.12:0,36,2941	0/0:53,0:53:99:0,156,12505	0/0:9,0:9:27.09:0,27,2008	0/0:6,0:6:18.06:0,18,1490	0/0:37,0:37:99:0,108,8670	0/0:11,0:11:33.11:0,33,2901	0/0:8,0:8:21.07:0,21,1590	0/0:15,0:15:45.15:0,45,3856	0/0:6,0:6:18.06:0,18,1493
chr10	84925129	.	A	AAGACAG	14139.96	PASS	AB=0.751;AC=28;AF=0.500;AN=56;BaseQRankSum=-3.155;DP=487;FS=7.583;HRun=0;HaplotypeScore=120.4416;InbreedingCoeff=0.8217;MQ=79.54;MQ0=6;MQRankSum=-14.639;QD=55.89;ReadPosRankSum=-3.163;VQSLOD=3.9882;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,30:38:66.23:2337,66,0	1/1:1,5:5:9.03:317,9,0	0/0:40,0:29:72.02:0,72,1404	0/0:45,0:25:56.34:0,56,1115	0/0:13,0:12:33.10:0,33,682	0/0:17,0:17:48.16:0,48,1135	1/1:4,9:14:15.05:511,15,0	1/1:6,12:20:60.16:1715,60,0	0/0:17,0:17:48.16:0,48,1061	1/1:6,24:31:76.81:2575,77,0	1/1:3,8:11:9.03:319,9,0	0/0:15,0:15:39.13:0,39,922	0/0:9,0:9:24.08:0,24,567	0/0:13,0:13:33.11:0,33,758	0/0:10,0:10:27.09:0,27,602	0/1:3,13:15:34.82:1081,0,35	1/1:3,14:18:33.11:1136,33,0	0/0:13,0:13:16.38:0,16,713	1/1:3,11:15:45.15:1373,45,0	1/1:2,9:11:15.05:525,15,0	1/1:5,10:14:15.05:456,15,0	1/1:3,9:12:12.04:425,12,0	0/0:13,0:13:36.12:0,36,851	0/0:21,0:21:45.15:0,45,1038	1/1:2,8:10:15.05:530,15,0	0/1:18,1:19:49.19:49,0,1117	1/1:1,14:16:24.08:793,24,0	0/0:8,0:8:12:0,12,233
chr10	84927875	.	TG	T	415.68	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.400;DP=663;FS=2.048;HRun=5;HaplotypeScore=63.3615;InbreedingCoeff=0.9682;MQ=83.87;MQ0=0;MQRankSum=-1.507;QD=23.09;ReadPosRankSum=-0.309;VQSLOD=2.5443;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,138,1851	0/0:10,0:10:24.08:0,24,328	0/0:26,0:26:72.23:0,72,947	0/0:22,0:22:49.72:0,50,640	0/0:30,0:30:81.25:0,81,1087	0/0:25,0:25:75.25:0,75,1015	0/0:26,0:26:78.22:0,78,1040	0/0:22,0:22:54.18:0,54,738	0/0:20,0:20:54.17:0,54,722	0/0:15,0:15:36.11:0,36,478	0/0:15,0:15:45.14:0,45,599	0/0:16,0:16:48.16:0,48,656	0/0:20,0:20:60.17:0,60,776	0/0:21,0:21:57.18:0,57,763	0/0:27,0:27:75.25:0,75,1025	0/0:23,0:23:60.18:0,60,792	0/0:35,0:35:99:0,105,1434	0/0:27,0:27:75.23:0,75,1004	0/0:28,0:28:48.67:0,49,912	0/0:16,0:16:45.15:0,45,615	0/0:44,0:44:99:0,126,1704	0/0:19,0:19:57.19:0,57,766	0/0:16,0:16:45.13:0,45,593	0/0:26,0:26:75.25:0,75,1026	1/1:2,16:18:45.13:511,45,0	0/0:27,0:27:72.23:0,72,969	0/0:30,0:29:84.26:0,84,1130	0/0:7,0:7:12.04:0,12,163
chr10	84930628	.	T	TTTCC	8051.43	PASS	AB=0.981;AC=28;AF=0.500;AN=56;BaseQRankSum=10.209;DP=577;FS=0.000;HRun=0;HaplotypeScore=107.5790;InbreedingCoeff=0.8569;MQ=52.10;MQ0=6;MQRankSum=-8.899;QD=25.64;ReadPosRankSum=-0.632;VQSLOD=4.4086;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,1:20:18.01:315,18,0	1/1:9,1:10:17.09:307,17,0	0/0:26,0:7:15.05:0,15,215	0/0:22,0:11:17.56:0,18,252	0/0:26,0:26:66.18:0,66,1038	0/0:19,0:19:48.15:0,48,795	1/1:22,0:22:24.73:493,25,0	1/1:6,29:34:78.05:1182,78,0	0/0:23,0:23:63.21:0,63,1063	1/1:25,0:25:63.18:1115,63,0	1/1:20,0:20:42.13:771,42,0	0/0:18,0:18:45.13:0,45,721	0/0:19,0:19:48.16:0,48,814	0/0:20,0:20:51.16:0,51,836	0/0:16,0:16:36.11:0,36,586	1/1:11,0:11:12.04:238,12,0	0/1:24,0:25:1.58:127,0,2	0/0:23,0:23:57:0,57,760	1/1:19,0:18:40.45:506,40,0	1/1:25,0:25:48.13:880,48,0	1/1:10,0:10:6.01:83,6,0	1/1:13,0:13:20.03:253,20,0	0/0:20,0:20:51.15:0,51,838	0/0:22,0:22:57.12:0,57,854	1/1:24,0:24:39.13:803,39,0	0/1:22,0:22:57.10:57,0,780	1/1:32,0:33:49.14:920,49,0	0/0:9,0:9:12.04:0,12,209
chr10	84930636	.	C	CTTCCTCCT	17506.73	PASS	AB=0.909;AC=29;AF=0.518;AN=56;BaseQRankSum=-12.890;DP=585;FS=2.609;HRun=0;HaplotypeScore=107.8646;InbreedingCoeff=0.9006;MQ=52.95;MQ0=6;MQRankSum=-9.566;QD=52.42;ReadPosRankSum=0.602;VQSLOD=4.5896;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,12:21:24.08:836,24,0	1/1:1,8:11:15.05:677,15,0	0/0:27,0:10:30.08:0,30,552	0/0:20,0:9:18.06:0,18,402	0/0:27,0:27:75.23:0,75,1838	0/0:19,0:19:57.18:0,57,1461	1/1:3,1:22:30.77:1062,31,0	1/1:30,0:30:81.22:1820,81,0	0/0:22,0:22:63.21:0,63,1558	1/1:2,22:27:66.21:2327,66,0	1/1:1,20:24:45.11:1675,45,0	0/0:17,0:17:48.15:0,48,1209	0/0:16,0:16:48.16:0,48,1356	0/0:18,0:18:54.17:0,54,1358	0/0:15,0:15:42.14:0,42,991	1/1:0,9:13:12.04:535,12,0	1/1:6,17:29:22.11:675,22,0	0/0:20,0:20:60.20:0,60,1428	1/1:1,19:21:60.18:1384,60,0	1/1:0,27:30:57.12:1805,57,0	1/1:1,7:9:6.02:220,6,0	1/1:0,15:15:18.02:600,18,0	0/0:18,0:18:54.18:0,54,1391	0/0:22,0:23:68.21:0,68,1483	1/1:0,23:24:39.13:1704,39,0	0/1:18,2:20:99:207,0,1302	1/1:2,27:36:48.08:1980,48,0	0/0:8,0:8:12.04:0,12,313
chr10	84932282	.	G	GTTCCTTC	3121.13	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.294;DP=693;FS=0.000;HRun=0;HaplotypeScore=166.1159;InbreedingCoeff=0.9658;MQ=86.90;MQ0=0;MQRankSum=-9.066;QD=76.13;ReadPosRankSum=-3.389;VQSLOD=2.7933;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,26:41:96.24:3216,96,0	0/0:12,0:12:15.10:0,15,517	0/0:20,0:20:45.08:0,45,948	0/0:29,0:29:78.03:0,78,1802	0/0:10,0:10:27.09:0,27,701	0/0:29,0:29:87.28:0,87,2205	0/0:27,0:27:78.27:0,78,2016	0/0:35,0:35:99:0,99,2335	0/0:27,0:27:78.17:0,78,1827	0/0:24,0:24:46.24:0,46,1079	0/0:17,0:17:15.37:0,15,693	0/0:30,0:30:84.27:0,84,2094	0/0:22,0:22:63.22:0,63,1560	0/0:19,0:19:57.18:0,57,1392	0/0:25,0:25:66.21:0,66,1655	0/0:27,0:27:78.27:0,78,1422	0/0:37,0:37:99:0,105,1932	0/0:32,0:32:90.31:0,90,2273	0/0:27,0:27:75.19:0,75,1624	0/0:19,0:19:48.12:0,48,1189	0/0:39,0:39:99:0,114,2843	0/0:29,0:29:81.21:0,81,1851	0/0:14,0:14:39.12:0,39,959	0/0:21,0:21:63.22:0,63,1636	0/0:21,0:21:60.21:0,60,1550	0/0:31,0:31:93.25:0,93,2229	0/0:22,0:22:60.14:0,60,1472	0/0:7,0:7:21.07:0,21,539
chr10	84932687	.	GC	G	4177.51	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=0.329;DP=640;FS=0.822;HRun=1;HaplotypeScore=80.6116;InbreedingCoeff=0.9998;MQ=86.07;MQ0=0;MQRankSum=-1.269;QD=38.33;ReadPosRankSum=0.687;VQSLOD=4.1510;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,56:57:99:2290,166,0	0/0:12,0:12:36.12:0,36,566	0/0:20,0:20:54.76:0,55,804	0/0:21,0:21:62.88:0,63,956	0/0:27,0:27:81.28:0,81,1287	0/0:26,0:26:78.22:0,78,1175	1/1:0,29:29:78.26:1091,78,0	0/0:34,0:34:99:0,102,1608	0/0:24,0:24:72.23:0,72,1126	0/0:12,0:12:36.12:0,36,554	0/0:12,0:12:36.11:0,36,551	0/0:19,0:19:57.19:0,57,911	0/0:14,0:14:42.14:0,42,671	0/0:24,0:24:72.23:0,72,1126	0/0:14,0:14:42.14:0,42,671	0/0:23,0:23:69.22:0,69,1065	0/0:28,0:28:84.25:0,84,1279	0/0:19,0:19:57.17:0,57,886	0/0:21,0:21:60.16:0,60,889	0/0:20,0:20:57.19:0,57,909	0/0:31,0:31:93.29:0,93,1448	0/0:16,0:16:48.16:0,48,766	0/0:21,0:21:63.18:0,63,957	0/0:41,0:41:99:0,123,1952	1/1:0,23:23:57.19:797,57,0	0/0:23,0:23:69.22:0,69,1081	0/0:13,0:13:39.13:0,39,620	0/0:16,0:16:48.16:0,48,763
chr10	84933028	.	AAGG	A	13231.60	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=15.585;DP=597;FS=6.403;HRun=0;HaplotypeScore=97.5876;InbreedingCoeff=0.9963;MQ=77.49;MQ0=0;MQRankSum=-6.732;QD=42.27;ReadPosRankSum=-0.503;VQSLOD=6.1375;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:38:93.27:1481,93,0	1/1:0,11:11:30.10:489,30,0	0/0:16,0:16:44.17:0,44,797	0/0:17,0:17:39.97:0,40,735	0/0:24,0:24:72.25:0,72,1610	0/0:17,0:16:51.17:0,51,1119	1/1:1,25:26:72.25:1177,72,0	1/1:1,28:29:81.28:1337,81,0	0/0:27,0:27:78.27:0,78,1749	1/1:2,26:28:81.26:1313,81,0	1/1:1,9:10:23.95:299,24,0	0/0:19,0:19:57.20:0,57,1290	0/0:23,0:23:69.24:0,69,1515	0/0:15,0:15:45.14:0,45,958	0/0:33,0:33:99:0,99,2226	1/1:0,22:22:60.20:990,60,0	1/1:2,25:27:63.22:1050,63,0	0/0:18,0:18:51.11:0,51,1044	1/1:1,18:19:51.17:849,51,0	1/1:2,16:18:51.17:815,51,0	1/1:3,27:30:72.66:1158,73,0	1/1:0,13:13:39:526,39,0	0/0:10,0:10:30.10:0,30,680	0/0:28,0:28:72.25:0,72,1618	1/1:1,16:17:42.10:658,42,0	0/0:20,1:21:13.28:0,13,1310	1/1:1,24:25:66.23:1088,66,0	0/0:16,0:16:48.16:0,48,1087
chr10	84933273	.	CA	C	8689.12	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=17.651;DP=581;FS=0.000;HRun=1;HaplotypeScore=70.4696;InbreedingCoeff=0.9985;MQ=80.60;MQ0=0;MQRankSum=-2.428;QD=37.78;ReadPosRankSum=-1.350;VQSLOD=4.6386;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1630	1/1:0,7:7:18.06:252,18,0	0/0:14,0:14:42.07:0,42,593	0/0:17,0:16:27.77:0,28,503	0/0:19,0:19:57.18:0,57,888	0/0:19,0:19:54.18:0,54,861	0/0:22,0:22:66.22:0,66,1048	1/1:0,32:32:87.28:1200,87,0	0/0:29,0:29:87.30:0,87,1388	1/1:0,27:27:81.27:1132,81,0	1/1:0,16:16:39.13:544,39,0	0/0:24,0:24:72.22:0,72,1123	0/0:19,0:19:57.18:0,57,886	0/0:19,0:19:57.19:0,57,911	0/0:25,0:25:75.23:0,75,1153	1/1:0,19:19:51.17:712,51,0	1/1:0,26:26:75.25:1049,75,0	0/0:25,0:24:69.22:0,69,1079	1/1:1,17:18:52.99:718,53,0	1/1:0,24:24:60.16:816,60,0	1/1:0,17:17:45.15:629,45,0	1/1:0,19:19:54.18:755,54,0	0/0:23,0:23:69.24:0,69,1103	0/0:15,0:15:45.15:0,45,719	0/0:11,0:11:33.11:0,33,527	0/0:22,1:23:27.24:0,27,969	1/1:0,25:25:63.21:881,63,0	0/0:13,0:13:39.12:0,39,596
chr10	84934494	.	T	TTA	2291.83	PASS	AB=0.974;AC=25;AF=0.446;AN=56;BaseQRankSum=2.287;DP=437;FS=6.685;HRun=0;HaplotypeScore=125.3720;InbreedingCoeff=0.6806;MQ=66.39;MQ0=20;MQRankSum=-1.106;QD=10.51;ReadPosRankSum=4.021;VQSLOD=3.1523;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:14:5.55:0,6,25	0/1:4,0:4:7.24:17,0,7	0/1:28,0:15:8.55:9,0,90	0/0:27,0:13:6.45:0,6,118	0/0:16,0:16:41.45:0,41,412	0/0:8,0:8:22.24:0,22,224	1/1:13,0:13:16.15:77,16,0	1/1:20,13:31:11.17:429,11,0	0/0:12,0:12:28.16:0,28,262	1/1:12,6:17:17.58:385,18,0	1/1:10,3:13:24.48:238,24,0	0/0:14,0:14:35.51:0,36,329	0/0:11,0:11:24.15:0,24,152	0/0:12,0:11:29.94:0,30,279	0/0:17,0:16:38.71:0,39,344	0/1:11,1:12:30.04:113,0,30	1/1:16,3:16:22.26:206,22,0	0/0:17,0:16:35.27:0,35,424	1/1:12,2:13:10.19:202,10,0	1/1:8,11:18:23.21:310,23,0	1/1:9,1:7:7.38:62,7,0	1/1:5,5:10:17.79:207,18,0	0/0:12,0:12:20.74:0,21,239	0/0:27,0:27:41.36:0,41,414	1/1:16,0:15:0.51:59,1,0	0/0:18,0:18:27.92:0,28,268	1/1:6,3:9:2.16:183,2,0	0/0:9,0:8:15.01:0,15,150
chr10	84934495	.	T	TA	1654.25	PASS	AB=0.970;AC=23;AF=0.411;AN=56;BaseQRankSum=6.864;DP=433;FS=34.978;HRun=0;HaplotypeScore=94.7755;InbreedingCoeff=0.4332;MQ=62.67;MQ0=22;MQRankSum=0.946;QD=7.01;ReadPosRankSum=6.453;VQSLOD=1.5395;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:15:6.80:32,7,0	0/1:5,0:5:13.39:13,0,23	0/1:26,0:13:9.87:10,0,76	0/0:26,0:12:6.65:0,7,133	0/0:16,0:16:41.81:0,42,378	0/0:8,0:8:23.97:0,24,224	1/1:2,10:12:3.56:160,4,0	0/1:32,3:33:67.59:284,0,68	0/0:13,0:13:35.55:0,36,276	0/1:17,0:16:9.56:167,0,10	0/1:11,1:12:3.55:159,0,4	0/0:13,0:13:32.77:0,33,294	0/0:11,0:11:30.36:0,30,202	0/0:12,0:11:32.92:0,33,284	0/0:17,0:16:44.51:0,45,360	0/1:13,0:13:54.67:55,0,74	1/1:16,3:16:10.41:128,10,0	0/0:17,0:16:44.95:0,45,419	1/1:10,4:13:13.45:213,13,0	0/1:16,1:15:4.11:164,0,4	1/1:8,4:8:7.42:56,7,0	1/1:7,1:8:17.49:126,17,0	0/0:12,0:12:19.99:0,20,208	0/0:27,0:27:47.18:0,47,417	1/1:3,13:15:9.04:166,9,0	0/0:16,0:16:32.19:0,32,295	1/1:10,0:10:2.70:110,3,0	0/0:9,0:8:15.01:0,15,146
chr10	84934676	.	T	TAAA	6138.67	PASS	AB=0.524;AC=27;AF=0.482;AN=56;BaseQRankSum=8.378;DP=475;FS=2.652;HRun=8;HaplotypeScore=77.4300;InbreedingCoeff=0.9181;MQ=87.43;MQ0=1;MQRankSum=-5.012;QD=24.36;ReadPosRankSum=-0.627;VQSLOD=2.4700;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:32:63.22:1225,63,0	1/1:0,0:4:8.97:69,9,0	0/0:14,0:14:36.10:0,36,465	0/0:22,0:22:50.07:0,50,595	0/0:9,0:9:27.07:0,27,340	0/0:14,0:14:42.14:0,42,552	1/1:5,18:26:57.13:1033,57,0	1/1:4,1:25:56.84:481,57,0	0/0:17,0:17:45.13:0,45,589	1/1:3,0:17:38.85:299,39,0	1/1:1,0:11:25.20:220,25,0	0/0:25,0:25:60.16:0,60,774	0/0:10,0:10:24.07:0,24,315	0/0:13,0:12:27.05:0,27,355	0/0:17,0:17:45.13:0,45,591	0/1:1,0:11:15.49:137,0,15	1/1:2,0:24:61.01:463,61,0	0/0:15,0:15:42.13:0,42,548	1/1:4,2:21:53.91:568,54,0	1/1:1,1:15:41.85:357,42,0	1/1:1,0:28:68.74:529,69,0	1/1:3,0:12:26.90:207,27,0	0/0:15,0:15:39.10:0,39,512	0/0:27,0:27:75.23:0,75,986	1/1:4,0:9:15.05:229,15,0	0/0:18,0:18:51.16:0,51,670	1/1:0,0:16:41.84:321,42,0	0/0:7,0:7:18.04:0,18,236
chr10	84936517	.	C	CA	304.07	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.956;DP=548;FS=2.424;HRun=7;HaplotypeScore=49.3930;InbreedingCoeff=0.9614;MQ=76.14;MQ0=0;MQRankSum=-0.794;QD=20.27;ReadPosRankSum=-0.804;VQSLOD=2.8576;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.06:0,57,543	0/0:8,0:8:23.99:0,24,222	0/0:15,0:15:40.62:0,41,380	0/0:11,0:11:27.04:0,27,260	0/0:43,0:43:99:0,114,1095	0/0:24,0:24:72.09:0,72,684	1/1:2,13:15:33.10:399,33,0	0/0:22,0:22:57.09:0,57,551	0/0:12,0:12:30:0,30,276	0/0:29,0:29:78.12:0,78,753	0/0:25,0:25:72.09:0,72,688	0/0:14,0:14:42.06:0,42,400	0/0:11,0:11:33.05:0,33,319	0/0:13,0:13:11.32:0,11,294	0/0:14,0:14:39.03:0,39,360	0/0:20,0:20:60.10:0,60,579	0/0:30,0:30:75.09:0,75,717	0/0:15,0:15:41.90:0,42,391	0/0:22,0:22:51.04:0,51,481	0/0:27,0:27:75.12:0,75,724	0/0:18,0:18:45.06:0,45,434	0/0:17,0:17:48.08:0,48,464	0/0:21,0:21:57.08:0,57,550	0/0:16,0:16:45.07:0,45,434	0/0:22,0:22:66.11:0,66,637	0/0:24,0:24:63.08:0,63,604	0/0:22,0:22:63.10:0,63,608	0/0:16,0:16:42.06:0,42,406
chr10	84936927	.	CTTTTTCT	C	939.10	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=1.182;DP=497;FS=3.409;HRun=0;HaplotypeScore=121.5225;InbreedingCoeff=0.0384;MQ=49.85;MQ0=14;MQRankSum=-5.150;QD=4.21;ReadPosRankSum=-4.223;VQSLOD=0.8264;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:25:9.06:505,9,0	0/1:7,0:6:38.34:38,0,123	0/0:29,0:5:11.82:0,12,229	0/0:47,0:9:12.70:0,13,148	0/0:22,0:22:59.94:0,60,1751	0/0:17,0:17:39.08:0,39,962	1/1:11,0:12:20.63:100,21,0	0/1:23,0:23:74.83:75,0,87	0/0:6,0:6:15.01:0,15,319	0/1:19,0:19:23.15:23,0,416	0/0:13,0:12:6.93:0,7,245	0/0:14,0:14:38.62:0,39,1115	0/0:12,0:12:36.07:0,36,952	0/0:12,0:11:24.05:0,24,704	0/0:11,0:11:29.98:0,30,677	0/1:11,0:11:1.16:1,0,162	0/0:23,0:23:18.09:0,18,623	0/1:25,0:24:28.38:28,0,1131	0/1:29,0:26:70.82:169,0,71	0/1:26,0:25:40.92:41,0,194	0/0:4,0:4:8.75:0,9,61	0/1:10,0:10:28.78:29,0,50	0/0:10,0:10:27.05:0,27,795	0/0:9,0:9:21.04:0,21,627	0/1:19,0:20:82.64:83,0,105	0/0:25,0:25:69.18:0,69,1917	0/1:14,0:12:6.77:7,0,131	0/0:15,0:14:36.06:0,36,1090
chr10	84936928	.	TTTTTC	T	2180.68	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=4.390;DP=502;FS=6.596;HRun=0;HaplotypeScore=101.8798;InbreedingCoeff=0.4788;MQ=48.91;MQ0=16;MQRankSum=-5.193;QD=8.08;ReadPosRankSum=-4.896;VQSLOD=-0.0283;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:20.34:334,20,0	0/1:7,0:6:37.72:39,0,38	0/0:30,0:5:0.54:0,1,141	0/1:54,0:8:28.85:29,0,72	0/0:23,0:23:57.25:0,57,1280	0/0:16,0:16:39.01:0,39,730	1/1:14,0:13:29.74:323,30,0	1/1:23,0:23:12.35:210,12,0	0/0:6,0:6:15:0,15,247	0/1:19,0:19:75.70:76,0,172	0/1:12,0:11:12.83:13,0,65	0/0:14,0:14:36.59:0,37,827	0/0:12,0:12:36.07:0,36,737	0/0:12,0:11:24.04:0,24,518	0/0:11,0:11:29.97:0,30,530	0/1:11,0:11:15.61:16,0,42	0/0:24,0:23:30.12:0,30,290	0/0:25,0:24:1.76:0,2,820	1/1:26,3:26:47.62:519,48,0	1/1:25,0:24:35.26:255,35,0	1/1:4,0:4:1.53:16,2,0	1/1:10,0:10:17.71:87,18,0	0/0:10,0:10:27.04:0,27,576	0/0:9,0:9:21.03:0,21,446	1/1:18,2:20:47.69:398,48,0	0/0:25,0:25:69.14:0,69,1434	0/1:16,0:12:3.69:60,0,4	0/0:14,0:13:36.10:0,36,836
chr10	84936929	.	TTTTC	T	3519.94	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=3.958;DP=503;FS=11.885;HRun=0;HaplotypeScore=89.7597;InbreedingCoeff=0.6735;MQ=48.74;MQ0=16;MQRankSum=-5.694;QD=16.22;ReadPosRankSum=-3.965;VQSLOD=1.5471;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:25:0.98:274,1,0	0/1:7,0:6:3.89:48,0,4	0/0:32,0:5:10.82:0,11,124	0/0:55,0:8:1.35:0,1,70	0/0:22,0:22:56.35:0,56,1094	0/0:16,0:16:39:0,39,615	1/1:3,11:13:30.10:501,30,0	1/1:23,0:23:38.72:324,39,0	0/0:6,0:6:14.99:0,15,229	0/1:19,0:19:92.46:118,0,92	0/1:13,0:12:23.41:60,0,23	0/0:14,0:14:36.59:0,37,727	0/0:13,0:13:39.06:0,39,654	0/0:11,0:10:24.04:0,24,457	0/0:11,0:11:29.96:0,30,470	1/1:11,0:11:0.92:39,1,0	0/0:24,0:23:6.22:0,6,145	0/0:24,0:23:18.35:0,18,824	1/1:28,1:26:59.81:674,60,0	1/1:22,2:23:55.59:504,56,0	1/1:4,0:4:11.06:79,11,0	1/1:10,0:10:23.85:181,24,0	0/0:10,0:10:27.04:0,27,524	0/0:9,0:9:21.03:0,21,403	1/1:21,0:21:50.99:518,51,0	0/0:25,0:25:68.49:0,68,1201	1/1:16,0:12:26.65:200,27,0	0/0:14,0:13:36.09:0,36,699
chr10	84936930	.	TTTC	T	4671.40	PASS	AB=0.974;AC=26;AF=0.464;AN=56;BaseQRankSum=5.054;DP=504;FS=6.580;HRun=0;HaplotypeScore=78.0615;InbreedingCoeff=0.8009;MQ=48.58;MQ0=16;MQRankSum=-6.243;QD=19.46;ReadPosRankSum=-3.902;VQSLOD=2.9465;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:25:5.05:253,5,0	1/1:8,0:7:15.81:107,16,0	0/0:33,0:5:11:0,11,93	0/0:57,0:8:6.41:0,6,75	0/0:22,0:22:44.55:0,45,858	0/0:16,0:16:38.78:0,39,499	1/1:14,0:13:29.97:340,30,0	1/1:7,15:22:48.09:443,48,0	0/0:6,0:6:14.98:0,15,197	0/1:17,1:18:19.25:239,0,19	1/1:13,0:12:10.76:143,11,0	0/0:14,0:14:36.58:0,37,597	0/0:13,0:13:38.95:0,39,536	0/0:11,0:10:24.03:0,24,375	0/0:11,0:11:29.95:0,30,407	1/1:11,0:11:18.17:118,18,0	0/1:24,0:23:32.71:60,0,33	0/0:24,0:23:12.32:0,12,701	1/1:24,6:27:61.63:814,62,0	1/1:16,8:23:54.97:694,55,0	1/1:3,1:4:11.82:107,12,0	1/1:0,10:10:23.90:277,24,0	0/0:10,0:10:27.03:0,27,444	0/0:9,0:9:21.03:0,21,340	1/1:12,8:20:50.90:682,51,0	0/0:25,0:25:62.40:0,62,949	1/1:12,4:12:35.20:395,35,0	0/0:13,0:12:36.07:0,36,559
chr10	84936931	.	TTC	T	4621.13	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=5.622;DP=510;FS=8.234;HRun=0;HaplotypeScore=71.5243;InbreedingCoeff=0.9304;MQ=47.99;MQ0=18;MQRankSum=-6.772;QD=19.02;ReadPosRankSum=-4.076;VQSLOD=3.3595;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:26:1.51:194,2,0	1/1:6,2:7:17.90:157,18,0	0/0:36,0:4:10.68:0,11,74	0/0:58,0:8:6.90:0,7,73	0/0:24,0:24:18.66:0,19,602	0/0:16,0:16:35.24:0,35,389	1/1:14,0:13:27.92:276,28,0	1/1:19,2:22:49.89:406,50,0	0/0:5,0:5:15:0,15,159	1/1:18,1:19:27.74:386,28,0	1/1:10,3:12:26.36:248,26,0	0/0:14,0:14:36.10:0,36,464	0/0:13,0:13:38.76:0,39,424	0/0:11,0:10:23.88:0,24,286	0/0:11,0:11:29.93:0,30,347	1/1:8,3:11:22:208,22,0	1/1:22,1:22:30.26:290,30,0	0/0:23,0:22:7.27:0,7,526	1/1:30,0:27:65.44:686,65,0	1/1:23,1:23:54.54:561,55,0	1/1:4,0:4:11.86:114,12,0	1/1:10,0:10:23.89:215,24,0	0/0:10,0:10:27.01:0,27,351	0/0:9,0:9:21.05:0,21,267	1/1:20,0:20:50.68:518,51,0	0/0:24,0:24:47.37:0,47,702	1/1:18,0:14:39.84:361,40,0	0/0:13,0:12:35.67:0,36,427
chr10	84936932	.	TC	T	4718.39	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=6.807;DP=514;FS=11.041;HRun=1;HaplotypeScore=65.8566;InbreedingCoeff=0.8629;MQ=47.71;MQ0=19;MQRankSum=-5.723;QD=17.61;ReadPosRankSum=-3.650;VQSLOD=3.1085;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:26:4.46:169,4,0	1/1:6,2:7:18:186,18,0	0/0:37,0:4:9.33:0,9,52	0/0:59,1:8:5.33:0,5,60	0/1:24,0:24:12.49:12,0,387	0/0:12,3:15:16.45:0,16,286	1/1:15,0:14:23.93:225,24,0	1/1:21,0:21:51.26:418,51,0	0/0:5,0:5:14.80:0,15,125	1/1:16,3:19:50.99:492,51,0	1/1:11,2:12:29.53:263,30,0	0/0:14,0:14:33.93:0,34,342	0/0:13,0:13:37.09:0,37,318	0/0:10,0:9:20.91:0,21,203	0/0:11,0:11:29.90:0,30,278	1/1:10,2:12:22.47:192,22,0	1/1:15,8:22:55.12:531,55,0	0/0:23,0:22:5.83:0,6,366	1/1:30,0:27:75.74:650,76,0	1/1:23,1:23:55.26:494,55,0	1/1:3,1:4:11.90:97,12,0	1/1:10,0:10:23.87:193,24,0	0/0:10,0:10:26.76:0,27,261	0/0:9,0:9:20.96:0,21,196	1/1:18,2:20:50.97:454,51,0	0/0:25,0:25:25.96:0,26,524	1/1:16,2:14:41.81:343,42,0	0/0:14,0:13:32.76:0,33,309
chr10	84937601	.	G	GT	568.99	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.021;DP=389;FS=0.874;HRun=7;HaplotypeScore=53.2973;InbreedingCoeff=0.8299;MQ=83.09;MQ0=0;MQRankSum=-1.612;QD=22.76;ReadPosRankSum=-0.548;VQSLOD=3.0424;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,20:25:58.37:664,58,0	0/0:4,0:4:12.02:0,12,116	0/0:15,0:12:13.22:0,13,133	0/0:19,0:20:38.46:0,38,338	0/0:17,0:17:39.06:0,39,376	0/0:18,0:18:36.05:0,36,347	0/0:17,0:17:36.05:0,36,346	0/0:21,0:21:45.06:0,45,428	0/0:10,0:10:27.03:0,27,255	0/0:11,0:11:30.05:0,30,290	0/0:15,0:15:30.03:0,30,290	0/0:16,0:16:39.05:0,39,376	0/0:17,0:17:45.06:0,45,429	0/0:7,0:7:18.03:0,18,174	0/0:15,0:15:42.06:0,42,405	0/0:15,0:15:23.99:0,24,218	0/0:25,0:25:60.09:0,60,579	0/0:10,0:10:27.04:0,27,260	0/0:10,0:10:18.03:0,18,174	0/0:10,0:10:24.03:0,24,231	0/0:11,0:11:30.05:0,30,290	0/0:5,0:5:5.99:0,6,52	0/0:13,0:13:30.04:0,30,287	0/0:6,0:6:17.98:0,18,164	0/0:16,0:16:24.03:0,24,231	0/0:13,0:13:21.03:0,21,203	0/0:17,0:17:36.04:0,36,339	0/0:9,0:9:21.03:0,21,203
chr10	84937617	.	GC	G	1275.44	PASS	AB=0.850;AC=24;AF=0.429;AN=56;BaseQRankSum=1.957;DP=330;FS=23.224;HRun=12;HaplotypeScore=43.6949;InbreedingCoeff=0.1735;MQ=80.71;MQ0=0;MQRankSum=-1.353;QD=5.93;ReadPosRankSum=1.772;VQSLOD=0.3053;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:18.91:0,19,225	1/1:1,2:4:8.01:52,8,0	0/1:15,0:12:9.13:9,0,62	0/1:18,0:18:40.94:41,0,87	0/1:10,3:13:19.60:20,0,83	1/1:1,14:16:31.31:223,31,0	1/1:3,11:16:33.95:244,34,0	0/0:13,0:14:7.45:0,7,82	0/1:7,2:9:28.37:28,0,103	1/1:3,4:9:1.21:94,1,0	1/1:4,6:11:13.89:92,14,0	0/1:12,1:13:24.65:25,0,110	0/0:13,0:13:26.93:0,27,236	0/1:3,2:5:17.23:17,0,24	0/1:14,0:14:12.44:12,0,208	1/1:2,12:14:17.93:139,18,0	1/1:3,19:23:46.81:349,47,0	0/0:11,0:11:17.82:0,18,140	0/0:6,0:9:14.52:0,15,98	0/0:6,0:6:11.83:0,12,89	0/0:11,0:11:14.89:0,15,114	0/0:4,0:4:5.91:0,6,46	0/1:11,2:13:25.23:25,0,125	0/1:5,2:7:28.43:28,0,103	0/1:6,7:14:9.83:61,0,10	0/0:5,0:6:2.14:0,2,46	0/0:6,0:12:14.66:0,15,110	0/0:7,0:7:8.64:0,9,55
chr10	84937838	.	G	GA	215.56	PASS	AB=0.767;AC=9;AF=0.161;AN=56;BaseQRankSum=3.675;DP=444;FS=4.055;HRun=0;HaplotypeScore=71.0420;InbreedingCoeff=0.5814;MQ=60.25;MQ0=66;MQRankSum=-1.608;QD=1.91;ReadPosRankSum=2.388;VQSLOD=1.4419;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:35.33:0,35,261	0/0:5,0:5:14.64:0,15,107	0/0:41,0:13:25.45:0,25,207	0/0:45,0:13:7.82:0,8,211	0/0:10,0:9:11.66:0,12,101	0/0:11,0:7:10.72:0,11,66	0/0:16,0:14:34.66:0,35,266	0/1:20,4:19:12.47:69,0,12	0/0:9,0:8:5.96:0,6,46	0/0:16,0:15:17.55:0,18,244	0/0:16,0:14:9:0,9,78	0/0:6,0:6:5.97:0,6,47	0/0:6,0:6:5.98:0,6,48	0/0:8,0:8:9.47:0,9,78	0/0:7,0:6:14.14:0,14,99	0/0:12,0:12:26.39:0,26,207	0/0:17,0:16:39.61:0,40,377	0/0:13,0:9:15.35:0,15,107	1/1:13,3:10:16.43:99,16,0	1/1:13,8:14:7.39:46,7,0	1/1:21,4:14:13.27:90,13,0	0/1:11,3:11:0.01:0,0,0	0/0:8,0:7:8.98:0,9,73	0/0:19,0:16:21.36:0,21,167	0/0:14,0:11:10.76:0,11,55	0/0:11,0:11:14.81:0,15,108	0/1:5,8:9:2.66:53,0,3	0/0:18,0:12:23.92:0,24,194
chr10	84939842	.	C	CA	5180.36	PASS	AB=0.741;AC=22;AF=0.393;AN=56;BaseQRankSum=-10.517;DP=562;FS=0.000;HRun=11;HaplotypeScore=57.9873;InbreedingCoeff=0.8513;MQ=74.51;MQ0=0;MQRankSum=0.612;QD=18.57;ReadPosRankSum=-1.802;VQSLOD=5.1355;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,778	1/1:1,9:11:6.67:235,7,0	0/0:14,0:13:13.56:0,14,112	0/0:12,0:12:7.95:0,8,46	0/0:19,1:20:26.31:0,26,382	0/0:19,0:19:56.77:0,57,439	0/0:22,0:22:56.76:0,57,438	1/1:5,20:25:60.05:582,60,0	0/0:16,0:16:32.82:0,33,249	1/1:5,22:27:66.01:639,66,0	0/1:4,15:19:8.93:363,0,9	0/0:14,0:15:31.89:0,32,238	0/0:11,0:11:26.89:0,27,209	0/0:14,0:14:38.82:0,39,300	0/0:12,0:12:29.86:0,30,232	1/1:2,17:19:24.86:434,25,0	1/1:3,24:28:39.72:570,40,0	0/0:15,0:15:32.83:0,33,255	1/1:6,14:20:44.90:427,45,0	1/1:4,21:27:42.38:538,42,0	1/1:5,13:18:42.07:419,42,0	1/1:8,17:26:33.59:484,34,0	0/0:19,0:20:46.81:0,47,347	0/0:19,1:20:29.34:0,29,411	0/0:21,0:21:53.78:0,54,418	0/1:33,3:36:4.20:4,0,513	1/1:5,17:22:46.95:485,47,0	0/0:15,0:15:35.85:0,36,279
chr10	84940569	.	G	GA	599.77	PASS	AB=0.850;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.935;DP=578;FS=2.130;HRun=11;HaplotypeScore=65.0474;InbreedingCoeff=0.5273;MQ=65.75;MQ0=5;MQRankSum=0.848;QD=6.38;ReadPosRankSum=-1.632;VQSLOD=1.6000;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:4,18:22:1.37:351,0,1	0/1:6,0:6:3.03:3,0,78	0/0:34,0:21:13.99:0,14,93	0/1:30,0:10:9.99:10,0,37	0/0:31,0:33:81.76:0,82,614	0/0:12,0:15:32.99:0,33,225	1/1:3,2:16:31.41:174,31,0	0/0:18,1:20:13.43:0,13,277	0/0:17,0:19:42.91:0,43,311	0/0:27,0:27:50.75:0,51,391	0/0:16,0:17:25.89:0,26,191	0/0:22,0:22:50.79:0,51,395	0/0:12,0:13:12.32:0,12,195	0/0:14,0:14:29.88:0,30,232	0/0:15,0:15:32.85:0,33,255	0/0:19,0:20:43.83:0,44,331	0/0:29,0:29:68.70:0,69,534	0/0:17,0:17:33.39:0,33,310	0/0:18,0:17:29.06:0,29,225	0/0:22,0:24:25.85:0,26,325	0/0:13,0:13:17.89:0,18,139	0/0:23,0:23:55.80:0,56,424	0/0:27,0:29:37.29:0,37,460	0/0:18,1:19:20.35:0,20,341	1/1:5,13:18:0.90:186,1,0	0/0:28,0:28:61.79:0,62,470	0/0:28,0:28:44.76:0,45,348	0/0:5,0:6:14.94:0,15,116
chr10	84941095	.	TA	T	250.82	PASS	AB=0.923;AC=5;AF=0.089;AN=56;BaseQRankSum=5.302;DP=413;FS=12.033;HRun=11;HaplotypeScore=60.3342;InbreedingCoeff=0.6010;MQ=54.05;MQ0=15;MQRankSum=2.482;QD=4.56;ReadPosRankSum=0.436;VQSLOD=0.2844;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:24:38.09:230,38,0	0/0:4,0:4:12.02:0,12,121	0/0:8,0:2:6.01:0,6,61	0/1:11,1:6:11.80:12,0,66	0/0:22,0:22:54.60:0,55,570	0/0:15,1:16:11.47:0,11,327	0/0:10,0:10:14.34:0,14,58	0/0:20,0:17:39.02:0,39,372	0/0:9,0:9:24.06:0,24,255	0/0:19,0:20:38.88:0,39,371	0/0:15,0:15:45.10:0,45,469	0/0:10,1:11:2.43:0,2,231	0/0:14,0:14:30.04:0,30,308	0/0:14,0:14:27.07:0,27,288	0/0:12,0:12:27.01:0,27,267	0/0:11,0:11:10.14:0,10,202	0/0:26,0:25:63.11:0,63,648	0/0:24,0:23:54.14:0,54,575	0/0:15,0:13:27.03:0,27,273	0/0:21,0:19:45.93:0,46,472	0/0:10,0:9:20.75:0,21,221	0/0:2,0:2:5.97:0,6,51	0/0:15,0:15:33.08:0,33,350	0/0:14,0:14:32.93:0,33,326	1/1:17,0:16:9.83:130,10,0	0/0:15,1:16:14.43:0,14,345	0/0:18,0:18:24.81:0,25,397	0/0:9,0:7:20.96:0,21,200
chr10	84941105	.	AAG	A	783.56	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=1.659;DP=421;FS=16.365;HRun=0;HaplotypeScore=64.3973;InbreedingCoeff=0.3912;MQ=59.23;MQ0=3;MQRankSum=-0.196;QD=6.03;ReadPosRankSum=-3.564;VQSLOD=0.0800;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,2:25:48.91:247,49,0	0/0:4,0:4:11.62:0,12,68	0/0:11,0:4:5.06:0,5,75	0/0:13,0:6:11.14:0,11,164	0/0:24,0:24:54.15:0,54,814	0/0:13,0:13:36.01:0,36,539	1/1:2,12:14:18.06:229,18,0	0/1:21,0:20:85.12:85,0,146	0/0:11,0:11:24.05:0,24,340	0/1:22,0:22:93.29:93,0,124	0/0:16,0:16:18.92:0,19,215	0/0:15,0:15:35.85:0,36,439	0/0:13,0:13:36.09:0,36,521	0/0:14,0:14:30.09:0,30,463	0/0:10,0:10:30.09:0,30,462	0/0:11,0:11:11.69:0,12,100	0/0:25,0:25:8.90:0,9,282	0/0:22,0:22:65.93:0,66,910	0/1:17,0:16:73.51:103,0,74	0/0:19,0:18:40.68:0,41,232	0/1:12,0:11:28.03:28,0,98	0/1:3,0:3:10.56:21,0,11	0/0:15,0:15:36.10:0,36,538	0/0:12,0:12:33.09:0,33,497	1/1:16,0:16:29.14:142,29,0	0/0:19,0:19:50.90:0,51,683	0/0:16,0:16:7.94:0,8,188	0/0:8,0:7:15.05:0,15,244
chr10	84942366	.	GTTTTTTTTTTT	G	921.87	PASS	AB=0.894;AC=7;AF=0.125;AN=56;BaseQRankSum=4.975;DP=526;FS=6.589;HRun=14;HaplotypeScore=154.7677;InbreedingCoeff=0.1593;MQ=62.39;MQ0=23;MQRankSum=-3.002;QD=9.91;ReadPosRankSum=0.796;VQSLOD=0.0954;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:42.09:0,42,1257	0/1:6,0:5:4.96:5,0,103	0/0:45,0:18:10.35:0,10,1163	0/0:46,0:10:20.01:0,20,338	0/0:22,0:25:60.21:0,60,2854	0/0:12,0:16:45.15:0,45,2164	0/1:14,0:18:13.57:14,0,534	1/1:7,12:19:42.01:773,42,0	0/0:13,0:16:39.13:0,39,1835	0/1:16,0:19:99:159,0,156	0/0:11,0:12:17.96:0,18,251	0/0:10,0:10:27.09:0,27,1371	0/0:18,0:18:54.19:0,54,2421	0/0:12,0:19:48.11:0,48,1782	0/0:12,0:13:36.12:0,36,1729	0/0:12,0:8:14.91:0,15,127	0/0:10,0:11:6:0,6,109	0/0:30,0:31:93.32:0,93,3983	0/1:8,1:9:32.86:87,0,33	0/0:11,1:14:12.04:0,12,213	0/0:9,1:9:2.88:0,3,15	0/0:12,4:20:15.05:0,15,297	0/0:17,0:17:48.16:0,48,2264	0/0:24,0:28:63.67:0,64,2646	0/0:14,0:15:33.11:0,33,1449	0/0:16,0:16:45.15:0,45,1900	0/1:16,1:16:15.50:16,0,194	0/0:9,0:9:27.09:0,27,1363
chr10	84942369	.	T	TGTGTG	1295.28	PASS	AB=0.964;AC=17;AF=0.304;AN=56;BaseQRankSum=9.143;DP=521;FS=1.306;HRun=0;HaplotypeScore=112.4375;InbreedingCoeff=0.4068;MQ=61.83;MQ0=27;MQRankSum=-8.019;QD=8.58;ReadPosRankSum=2.994;VQSLOD=2.5751;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:19:42.06:0,42,873	0/1:6,0:5:26.43:26,0,47	0/0:53,0:17:41.56:0,42,656	0/0:50,0:9:19.82:0,20,231	0/0:27,0:25:60.20:0,60,1273	0/0:15,0:15:45.15:0,45,957	0/1:17,0:16:23.23:23,0,163	1/1:16,0:15:27.20:193,27,0	0/0:14,0:14:39.13:0,39,826	0/1:18,0:17:40.35:40,0,94	0/1:12,0:12:46.74:92,0,47	0/0:10,0:9:27.09:0,27,590	0/0:18,0:18:54.19:0,54,1164	0/0:20,0:19:46.01:0,46,889	0/0:12,0:12:36.12:0,36,780	0/1:11,0:7:20.30:20,0,68	0/1:12,0:11:18.01:28,0,18	0/0:31,0:31:93.30:0,93,1932	0/1:2,0:3:1.82:65,0,2	1/1:5,6:13:11.98:311,12,0	1/1:4,4:7:3.47:66,3,0	1/1:9,9:19:14.81:297,15,0	0/0:20,0:20:51.17:0,51,1069	0/0:29,0:28:63.19:0,63,1299	0/0:15,0:15:33.11:0,33,660	0/0:16,0:16:48.14:0,48,925	1/1:2,9:13:15.04:315,15,0	0/0:17,0:16:39.02:0,39,647
chr10	84942371	.	T	TGTGTGTGTGTGTG	2913.15	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=7.661;DP=523;FS=0.000;HRun=0;HaplotypeScore=171.9349;InbreedingCoeff=0.8101;MQ=61.02;MQ0=29;MQRankSum=-8.487;QD=20.09;ReadPosRankSum=4.034;VQSLOD=2.2723;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:20:44.73:0,45,587	1/1:0,0:5:5.96:127,6,0	0/0:58,0:17:15.85:0,16,925	0/0:51,0:9:16.92:0,17,227	0/0:26,0:24:63.21:0,63,2204	0/0:15,0:15:45.14:0,45,1636	0/1:17,0:16:11.78:228,0,12	1/1:18,0:15:26:361,26,0	0/0:15,0:15:39.13:0,39,1441	1/1:5,0:16:26.59:474,27,0	1/1:1,5:10:8.99:513,9,0	0/0:10,0:9:27.09:0,27,1068	0/0:18,0:18:54.16:0,54,1858	0/0:20,0:19:43.95:0,44,1380	0/0:12,0:12:36.12:0,36,1337	1/1:0,1:8:2.95:187,3,0	1/1:2,7:10:3:185,3,0	0/0:31,0:31:93.19:0,93,3093	1/1:3,0:3:9.03:197,9,0	1/1:10,0:11:15.02:290,15,0	1/1:8,0:7:2.99:55,3,0	1/1:19,0:19:14.18:229,14,0	0/0:20,0:20:57.17:0,57,1850	0/0:28,0:27:60.14:0,60,1962	0/0:15,0:15:33.10:0,33,1157	0/0:17,0:17:51.15:0,51,1525	1/1:13,0:12:15.04:273,15,0	0/0:17,0:16:48.13:0,48,1303
chr10	84942373	.	T	TGTGTG	2191.13	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=9.418;DP=522;FS=5.608;HRun=0;HaplotypeScore=108.8573;InbreedingCoeff=0.7754;MQ=59.22;MQ0=31;MQRankSum=-8.597;QD=15.65;ReadPosRankSum=4.242;VQSLOD=2.6501;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:21:27.79:0,28,130	1/1:6,0:5:5.94:90,6,0	0/0:62,0:16:36.80:0,37,656	0/0:52,0:8:6.62:0,7,111	0/0:26,0:24:63.21:0,63,1291	0/0:15,0:15:42.14:0,42,891	1/1:5,10:16:29.24:583,29,0	1/1:18,0:15:1.32:56,1,0	0/0:15,0:15:42.12:0,42,818	1/1:16,0:15:22.50:221,22,0	1/1:7,0:7:9.02:189,9,0	0/0:10,0:9:27.09:0,27,593	0/0:16,0:16:48.16:0,48,1042	0/0:18,0:17:42.08:0,42,783	0/0:12,0:12:36.11:0,36,757	1/1:12,0:8:2.95:63,3,0	1/1:9,0:8:3:63,3,0	0/0:31,0:31:91.10:0,91,1756	0/1:4,0:4:17.37:62,0,17	1/1:12,0:12:18.02:390,18,0	1/1:8,0:7:3.47:66,3,0	1/1:19,0:19:14.90:296,15,0	0/0:21,0:21:60.19:0,60,1234	0/0:28,0:27:57.16:0,57,1134	0/0:15,0:15:30.10:0,30,670	0/0:18,0:18:54.16:0,54,1111	1/1:12,0:11:15.04:312,15,0	0/0:17,0:16:48.16:0,48,1011
chr10	84942375	.	T	TGTG	1901.34	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=10.529;DP=524;FS=7.192;HRun=0;HaplotypeScore=93.5876;InbreedingCoeff=0.8156;MQ=57.77;MQ0=32;MQRankSum=-8.687;QD=11.39;ReadPosRankSum=4.596;VQSLOD=2.5595;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,14:19:29.60:579,30,0	1/1:7,0:6:6.43:59,6,0	0/0:66,0:15:37.53:0,38,517	0/0:53,0:8:9.49:0,9,95	0/0:25,0:23:60.18:0,60,951	0/0:16,0:16:45.13:0,45,700	1/1:16,0:15:28.62:313,29,0	0/1:18,0:15:0.11:42,0,0	0/0:14,0:14:39.13:0,39,634	1/1:16,0:15:24.33:191,24,0	1/1:7,0:7:9.02:112,9,0	0/0:11,0:10:27.09:0,27,426	0/0:16,0:16:48.14:0,48,752	0/0:18,0:17:40.92:0,41,545	0/0:12,0:12:36.11:0,36,591	1/1:13,0:9:5.95:59,6,0	1/1:12,0:11:8.92:76,9,0	0/0:27,0:27:77.07:0,77,1244	0/1:4,0:4:10.25:12,0,10	1/1:12,0:12:17.89:241,18,0	1/1:9,0:8:2.71:22,3,0	1/1:19,0:19:15:206,15,0	0/0:22,0:22:63.18:0,63,981	0/0:25,0:24:51.15:0,51,823	0/0:16,0:16:30.10:0,30,517	0/0:19,0:19:51.17:0,51,872	1/1:12,0:11:15.04:198,15,0	0/0:17,0:16:48.16:0,48,805
chr10	84942379	.	T	TG	2235.81	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=12.655;DP=597;FS=26.928;HRun=0;HaplotypeScore=123.7490;InbreedingCoeff=0.9284;MQ=52.28;MQ0=33;MQRankSum=-9.642;QD=8.84;ReadPosRankSum=4.306;VQSLOD=2.0396;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:25:40.96:253,41,0	1/1:12,0:11:14.16:90,14,0	0/0:65,0:15:31.93:0,32,241	0/0:52,0:9:12.11:0,12,115	0/0:24,0:22:31.50:0,31,482	0/0:16,0:16:39.05:0,39,384	1/1:24,0:23:46.38:282,46,0	1/1:24,0:20:43.94:262,44,0	0/0:15,0:15:40.27:0,40,406	1/1:23,0:22:46.45:331,46,0	1/1:12,0:12:17.58:106,18,0	0/0:16,0:15:19.58:0,20,281	0/0:15,0:15:37.76:0,38,343	0/0:17,0:16:19.87:0,20,129	0/0:12,0:12:35.86:0,36,365	1/1:19,0:15:14.89:117,15,0	1/1:17,0:16:20.38:121,20,0	0/0:29,0:29:55.74:0,56,607	1/1:7,0:7:16.48:92,16,0	1/1:18,0:17:26.48:203,26,0	1/1:12,0:11:3:30,3,0	1/1:23,0:23:17.12:97,17,0	0/0:22,0:22:31.86:0,32,489	0/0:25,0:24:45.41:0,45,468	1/1:3,11:15:0.92:229,1,0	0/0:19,0:19:51:0,51,490	1/1:19,0:18:34.23:248,34,0	0/0:17,0:16:42.11:0,42,440
chr10	84943341	.	CTT	C	2980.48	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=3.290;DP=380;FS=0.935;HRun=10;HaplotypeScore=57.3985;InbreedingCoeff=0.9637;MQ=70.72;MQ0=7;MQRankSum=-1.209;QD=20.14;ReadPosRankSum=0.326;VQSLOD=2.3637;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:30.42:294,30,0	0/0:10,0:10:30.10:0,30,453	0/0:15,0:8:13.10:0,13,136	0/0:24,0:13:23.69:0,24,261	0/0:10,0:11:23.55:0,24,320	0/0:17,0:17:45.15:0,45,711	1/1:11,0:11:17.57:103,18,0	1/1:10,25:33:75.09:792,75,0	0/0:6,0:6:15.05:0,15,238	0/0:10,0:10:24.06:0,24,337	0/0:16,0:17:48.10:0,48,701	0/0:7,0:7:21.07:0,21,333	0/0:9,0:9:27.09:0,27,429	0/0:2,0:3:8.52:0,9,104	0/0:12,0:13:35.61:0,36,531	0/0:6,0:6:18.06:0,18,284	0/0:17,0:17:36.12:0,36,569	0/0:16,0:16:42.14:0,42,655	1/1:3,18:20:54.04:572,54,0	1/1:3,10:13:27.07:300,27,0	1/1:5,5:10:12.01:134,12,0	./.	0/0:6,0:6:12.03:0,12,171	0/0:12,0:12:24.08:0,24,376	1/1:1,18:19:48.06:519,48,0	0/0:18,0:18:48.16:0,48,747	1/1:1,15:16:42.11:468,42,0	0/0:11,0:11:15.04:0,15,217
chr10	84943350	.	TTA	T	1334.98	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=8.385;DP=364;FS=3.257;HRun=0;HaplotypeScore=60.3835;InbreedingCoeff=0.4968;MQ=72.02;MQ0=7;MQRankSum=-2.118;QD=7.63;ReadPosRankSum=2.079;VQSLOD=2.8195;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:52.42:727,52,0	0/0:10,0:10:29.75:0,30,216	0/0:15,0:7:12.85:0,13,141	0/0:28,0:13:26.31:0,26,260	0/0:8,0:8:23.90:0,24,371	0/0:16,0:16:48.15:0,48,839	1/1:0,12:12:18.06:257,18,0	0/1:32,0:31:82.22:112,0,82	0/0:6,0:6:18.05:0,18,306	0/1:10,0:10:19.60:20,0,90	0/0:17,0:17:19.60:0,20,281	0/0:7,0:7:21.07:0,21,391	0/0:10,0:10:30.09:0,30,524	0/0:3,0:3:8.86:0,9,124	0/0:12,0:12:35.95:0,36,628	0/1:9,0:9:43.09:43,0,104	0/1:16,0:16:10.12:10,0,220	0/0:17,0:17:49.28:0,49,758	1/1:21,0:19:3:63,3,0	1/1:10,0:10:20.98:84,21,0	1/1:5,0:5:8.82:30,9,0	0/0:1,0:1:0.47:0,0,1	0/0:6,0:6:18.03:0,18,268	0/0:9,0:9:27.05:0,27,432	1/1:19,0:19:9.11:87,9,0	0/0:19,0:19:57.08:0,57,927	0/1:19,0:19:25.50:85,0,25	0/0:5,0:5:15.05:0,15,275
chr10	84943518	.	G	GAGCCATCTCTCCAGCCCCCACCA	21021.50	PASS	AB=0.667;AC=27;AF=0.482;AN=56;BaseQRankSum=3.717;DP=479;FS=5.727;HRun=0;HaplotypeScore=205.6479;InbreedingCoeff=0.8704;MQ=50.66;MQ0=21;MQRankSum=-12.298;QD=81.16;ReadPosRankSum=-2.911;VQSLOD=3.8283;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,2:37:20.87:1565,21,0	1/1:7,2:9:18.06:1694,18,0	0/0:15,0:7:12.01:0,12,377	0/0:21,0:14:35.81:0,36,1192	0/0:18,0:18:51.15:0,51,2437	0/0:18,0:18:42.14:0,42,2506	1/1:15,0:15:27.09:1666,27,0	1/1:32,0:23:57.20:2830,57,0	0/0:14,0:13:27.09:0,27,1628	1/1:9,0:8:12.04:975,12,0	1/1:18,0:18:39:1536,39,0	0/0:11,0:11:30.10:0,30,1557	0/0:7,0:7:15.05:0,15,915	0/0:11,0:11:27.09:0,27,1317	0/0:13,0:13:33.11:0,33,1809	1/1:5,2:12:15.05:1509,15,0	0/1:11,5:22:99:2111,0,131	0/0:14,0:14:27.09:0,27,1598	1/1:22,0:14:39.12:2154,39,0	1/1:2,0:21:15.05:1521,15,0	1/1:14,0:14:21.07:899,21,0	1/1:3,0:11:3.01:309,3,0	0/0:12,0:12:27.56:0,28,1514	0/0:31,0:31:66.21:0,66,3375	1/1:10,2:19:30.10:1640,30,0	0/0:24,0:24:63.21:0,63,3239	1/1:0,0:16:5.54:612,6,0	0/0:10,0:10:24.08:0,24,1127
chr10	84943522	.	C	CCCCACCAAGCC	6137.28	PASS	AB=0.966;AC=17;AF=0.304;AN=56;BaseQRankSum=8.352;DP=466;FS=14.050;HRun=0;HaplotypeScore=143.8839;InbreedingCoeff=-0.0007;MQ=51.43;MQ0=18;MQRankSum=-7.786;QD=25.47;ReadPosRankSum=-1.974;VQSLOD=3.3030;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:99:331,0,710	0/1:9,0:9:99:251,0,591	0/0:14,0:7:12.01:0,12,337	0/0:21,0:15:35.81:0,36,971	0/0:18,0:18:51.15:0,51,1648	0/0:20,0:20:51.17:0,51,1769	0/1:16,0:16:99:647,0,245	0/1:35,0:26:99:1221,0,626	0/0:16,0:15:33.11:0,33,1147	0/1:6,1:14:99:487,0,491	0/1:19,0:19:99:359,0,286	0/0:11,0:11:30.10:0,30,976	0/0:8,0:8:18.06:0,18,626	0/0:12,0:12:33.11:0,33,1033	0/0:14,0:14:39.13:0,39,1239	0/1:12,0:12:99:254,0,498	0/1:21,0:21:99:638,0,723	0/0:13,0:13:36.12:0,36,1175	0/1:20,0:13:99:489,0,434	1/1:10,0:9:15.05:693,15,0	0/1:14,0:14:95.44:95,0,404	1/1:7,0:7:3.01:142,3,0	0/0:13,0:13:33.10:0,33,980	0/0:32,0:32:93.32:0,93,3028	0/1:19,0:19:99:248,0,676	0/0:24,0:24:69.24:0,69,2300	1/1:10,0:10:5.85:284,6,0	0/0:9,0:9:24.08:0,24,734
chr10	84944060	.	TAC	T	1066.49	PASS	AB=0.935;AC=18;AF=0.321;AN=56;BaseQRankSum=2.042;DP=677;FS=2.005;HRun=0;HaplotypeScore=114.9114;InbreedingCoeff=0.2223;MQ=66.66;MQ0=18;MQRankSum=1.219;QD=3.16;ReadPosRankSum=1.938;VQSLOD=2.4971;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:27.92:0,28,186	0/0:13,0:13:2.98:0,3,34	0/0:36,0:27:6:0,6,55	0/0:28,0:23:11.98:0,12,125	0/0:22,0:22:28.66:0,29,436	0/0:20,0:20:23.92:0,24,311	0/1:44,2:45:39.55:40,0,683	1/1:24,1:22:10.43:107,10,0	0/1:16,1:15:42.46:42,0,223	0/0:35,0:30:13.46:0,13,100	0/0:15,0:17:9.49:0,9,99	0/1:15,1:15:9.56:10,0,206	0/0:24,0:24:16.43:0,16,392	0/1:20,0:20:4.68:5,0,310	0/0:8,0:8:6.02:0,6,91	0/0:11,0:10:12.03:0,12,136	0/0:23,0:26:35.35:0,35,295	0/1:23,1:24:16.98:17,0,624	1/1:11,1:9:1.31:31,1,0	0/1:13,5:18:24.46:178,0,24	1/1:38,14:48:26.72:415,27,0	1/1:22,6:28:27.04:230,27,0	0/1:23,1:23:9.53:10,0,265	0/1:40,3:43:45.09:45,0,984	0/0:23,0:18:5.96:0,6,36	0/0:29,1:30:6.48:0,6,360	1/1:6,2:9:14.51:112,15,0	0/0:8,0:8:6.91:0,7,91
chr10	84944122	.	CCACA	C	4265.90	PASS	AB=0.675;AC=12;AF=0.214;AN=56;BaseQRankSum=1.107;DP=906;FS=4.388;HRun=0;HaplotypeScore=176.4964;InbreedingCoeff=0.7612;MQ=46.16;MQ0=75;MQRankSum=-1.942;QD=17.06;ReadPosRankSum=-0.605;VQSLOD=4.3083;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:48.08:0,48,1039	0/0:6,0:6:7.89:0,8,31	0/0:69,0:4:8.51:0,9,91	0/0:77,0:5:8.78:0,9,116	0/0:23,0:23:45.15:0,45,1016	0/0:25,0:24:44.87:0,45,1006	0/0:17,0:42:44.71:0,45,201	1/1:25,17:30:48.67:775,49,0	0/0:18,0:18:23.01:0,23,835	0/0:23,0:30:61.73:0,62,331	0/1:4,0:9:33.81:37,0,34	0/0:24,0:22:38.18:0,38,963	0/0:24,0:22:47.82:0,48,1024	0/0:24,0:22:54.17:0,54,1173	0/0:13,0:15:38.61:0,39,786	0/0:6,0:19:35.62:0,36,159	0/0:10,0:34:69.23:0,69,335	0/0:27,0:28:58.18:0,58,1269	0/1:12,13:18:8.81:466,0,9	1/1:11,17:25:36.08:580,36,0	1/1:56,48:94:44.73:1716,45,0	1/1:11,15:24:29.96:439,30,0	0/0:16,0:15:30.10:0,30,701	0/0:53,0:54:99:0,120,2477	0/0:26,0:20:41.69:0,42,955	0/0:36,0:31:67.99:0,68,1310	1/1:4,7:9:15.05:254,15,0	0/0:7,0:6:18.06:0,18,336
chr10	84944268	.	C	CCA	2037.11	PASS	AB=0.870;AC=9;AF=0.173;AN=52;BaseQRankSum=-0.811;DP=1145;FS=23.506;HRun=0;HaplotypeScore=169.6356;InbreedingCoeff=0.8182;MQ=42.33;MQ0=161;MQRankSum=-1.143;QD=12.65;ReadPosRankSum=-0.396;VQSLOD=1.8961;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:49:65.94:0,66,740	1/1:6,10:16:15.05:231,15,0	./.	./.	0/0:36,0:29:36.11:0,36,442	0/0:24,0:25:44.49:0,44,576	0/0:47,0:40:39.11:0,39,565	0/0:61,0:28:32.86:0,33,448	0/0:36,0:32:54.09:0,54,658	0/1:50,9:41:99:455,0,134	1/1:5,6:9:11.87:159,12,0	0/0:35,0:33:33.97:0,34,382	0/0:31,0:21:38.82:0,39,457	0/0:38,0:32:60.03:0,60,712	0/0:33,0:26:27:0,27,298	1/1:15,12:22:44.18:668,44,0	1/1:29,16:38:6.99:677,7,0	0/0:40,0:35:64.93:0,65,752	0/0:52,0:16:29.86:0,30,308	0/0:34,0:23:20.90:0,21,246	0/0:161,0:133:99:0,165,2025	0/0:47,0:43:57.17:0,57,695	0/0:30,0:24:33.09:0,33,404	0/0:67,0:68:99:0,129,1511	0/0:27,0:21:33.10:0,33,405	0/0:47,0:36:79.50:0,79,979	0/0:12,0:12:12.04:0,12,147	0/0:24,0:22:48.15:0,48,591
chr10	84944537	.	TAC	T	2390.99	PASS	AB=0.647;AC=9;AF=0.161;AN=56;BaseQRankSum=7.223;DP=1047;FS=3.419;HRun=0;HaplotypeScore=112.4703;InbreedingCoeff=0.7823;MQ=46.90;MQ0=80;MQRankSum=0.786;QD=16.60;ReadPosRankSum=2.417;VQSLOD=3.5924;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,2:47:75.22:0,75,1186	1/1:3,9:12:18.06:231,18,0	0/0:50,0:6:1.95:0,2,62	0/0:50,0:4:0.72:0,1,1	0/0:20,1:19:9.55:0,10,667	0/0:32,0:30:39.42:0,39,674	0/0:32,0:29:48.64:0,49,795	0/0:48,0:35:90.29:0,90,1412	0/0:42,0:35:52.92:0,53,813	0/1:20,24:29:11.49:771,0,11	1/1:6,9:13:27.07:340,27,0	0/0:31,0:29:45.14:0,45,723	0/0:26,0:24:36.07:0,36,565	0/0:26,0:23:38.96:0,39,611	0/0:32,0:28:24.55:0,25,397	1/1:4,21:23:24.08:305,24,0	1/1:22,25:42:75.04:906,75,0	0/0:27,0:21:28.94:0,29,633	0/0:27,0:12:30.07:0,30,476	0/0:17,0:15:27.09:0,27,453	0/0:142,14:112:46.63:0,47,1321	0/0:32,0:30:59.86:0,60,905	0/0:24,0:23:59.87:0,60,939	0/0:61,1:55:59.20:0,59,1468	0/0:29,0:23:53.85:0,54,868	0/0:53,1:43:75.76:0,76,1724	0/0:13,0:8:12.04:0,12,202	0/0:14,0:11:18.06:0,18,282
chr10	84944626	.	C	CCA	3712.63	PASS	AB=0.791;AC=11;AF=0.196;AN=56;BaseQRankSum=-4.289;DP=962;FS=44.447;HRun=0;HaplotypeScore=143.9355;InbreedingCoeff=0.6406;MQ=53.82;MQ0=62;MQRankSum=0.304;QD=11.79;ReadPosRankSum=-2.060;VQSLOD=1.1027;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:47:99:0,102,1237	0/0:13,0:13:20.18:0,20,251	0/0:54,0:7:3.82:0,4,47	0/1:63,0:15:9.98:10,0,38	0/0:28,0:27:54.16:0,54,652	0/0:18,0:19:41.94:0,42,467	0/0:22,0:24:57.94:0,58,689	1/1:45,0:21:11.78:106,12,0	0/0:28,0:29:53.90:0,54,613	0/0:51,0:44:76.76:0,77,863	0/0:16,0:13:15.03:0,15,170	0/0:29,0:29:69.04:0,69,808	0/0:21,0:20:39.12:0,39,472	0/0:22,0:23:41.76:0,42,459	0/0:27,0:26:63.17:0,63,737	0/0:27,0:26:55.65:0,56,625	0/0:43,0:44:95.09:0,95,1051	0/0:39,0:38:89.29:0,89,1050	1/1:22,9:14:27.09:417,27,0	0/1:11,15:26:9.43:360,0,9	1/1:61,44:84:43.02:1906,43,0	0/1:22,11:32:32.36:660,0,32	0/0:17,0:16:39.11:0,39,456	0/0:54,0:54:99:0,101,1271	0/0:25,0:24:51.42:0,51,633	0/0:38,0:36:53.99:0,54,628	1/1:6,3:8:15.44:253,15,0	0/0:12,0:12:33.10:0,33,400
chr10	84944746	.	CCACA	C	2834.88	PASS	AB=0.698;AC=11;AF=0.196;AN=56;BaseQRankSum=-0.095;DP=846;FS=2.970;HRun=0;HaplotypeScore=152.2716;InbreedingCoeff=0.8146;MQ=52.48;MQ0=59;MQRankSum=-0.128;QD=15.84;ReadPosRankSum=0.945;VQSLOD=3.6492;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,1:34:13.36:0,13,124	1/1:4,6:8:9.03:147,9,0	0/0:42,0:7:17.89:0,18,222	0/0:42,0:6:7.57:0,8,92	0/0:30,0:29:33.10:0,33,729	0/0:18,0:17:10.13:0,10,653	0/0:18,0:26:21.20:0,21,326	0/0:44,0:27:21.57:0,22,243	0/0:22,0:22:44.87:0,45,936	1/1:31,6:29:42.07:585,42,0	1/1:5,11:16:11.21:330,11,0	0/0:14,0:16:30.52:0,31,498	0/0:15,0:16:23.73:0,24,325	0/0:22,0:21:51.14:0,51,1126	0/0:18,0:21:35.83:0,36,685	1/1:7,16:22:36.12:566,36,0	1/1:14,35:48:78.06:1231,78,0	0/0:31,0:30:65.51:0,66,1221	0/0:17,0:17:33.92:0,34,437	0/0:11,0:14:8.82:0,9,158	0/0:70,0:83:64.43:0,64,1110	0/0:28,0:34:30.72:0,31,535	0/0:23,0:23:47.84:0,48,1049	0/0:37,0:37:71.96:0,72,1540	0/1:21,2:35:99:148,0,276	0/0:28,0:26:50.83:0,51,908	0/0:8,0:13:12.51:0,13,214	0/0:12,0:11:24.04:0,24,448
chr10	84945531	.	T	TGG	874.93	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=4.039;DP=363;FS=4.818;HRun=7;HaplotypeScore=62.2851;InbreedingCoeff=0.7496;MQ=85.38;MQ0=0;MQRankSum=-4.166;QD=22.43;ReadPosRankSum=-1.380;VQSLOD=1.9084;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,4:14:24.08:384,24,0	0/0:9,0:9:27.07:0,27,304	0/1:8,0:8:7.43:7,0,161	0/0:20,0:17:16.49:0,16,279	0/0:19,0:19:48.14:0,48,558	0/0:18,0:18:54.15:0,54,618	0/0:15,0:15:36.04:0,36,394	0/0:25,0:25:54.13:0,54,621	0/0:9,0:9:27.08:0,27,314	0/0:23,0:23:63.17:0,63,718	0/0:13,0:13:36.06:0,36,419	0/0:6,0:6:12.03:0,12,140	0/0:11,0:11:27.08:0,27,314	0/0:9,0:9:21.06:0,21,245	0/0:13,0:13:39.10:0,39,444	0/0:10,0:10:30.09:0,30,349	0/0:27,0:27:66.16:0,66,756	0/0:17,0:17:48.10:0,48,544	0/0:12,0:12:32.99:0,33,365	0/0:11,0:11:30.09:0,30,349	0/0:7,0:7:15.04:0,15,175	0/0:6,0:6:15.03:0,15,164	0/0:5,0:5:15.04:0,15,175	0/0:5,0:5:9.02:0,9,105	1/1:5,12:17:40.03:609,40,0	0/0:7,0:7:21.06:0,21,244	0/0:20,0:20:57.16:0,57,663	0/0:7,0:7:18.05:0,18,210
chr10	84945558	.	C	CT	482.84	PASS	AB=1.000;AC=8;AF=0.148;AN=54;BaseQRankSum=5.072;DP=335;FS=2.743;HRun=8;HaplotypeScore=60.2251;InbreedingCoeff=0.3655;MQ=72.82;MQ0=5;MQRankSum=-5.119;QD=5.75;ReadPosRankSum=-2.241;VQSLOD=-0.1161;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,9:13:25.21:244,25,0	0/0:10,0:10:17.53:0,18,71	0/0:23,0:12:14.86:0,15,113	0/1:12,0:8:4.15:4,0,79	0/0:20,0:20:51.01:0,51,462	0/0:18,0:18:54.03:0,54,494	0/1:7,0:7:16.48:16,0,22	0/0:19,0:19:1.94:0,2,71	0/0:7,0:6:8.98:0,9,78	0/1:20,0:20:1.78:2,0,56	0/0:10,0:10:15.02:0,15,55	0/0:4,0:4:11.98:0,12,102	0/0:8,0:8:21:0,21,189	0/0:8,0:8:15:0,15,137	0/0:11,0:10:24.01:0,24,220	0/0:6,0:6:11.51:0,12,52	0/0:25,0:23:27.11:0,27,182	0/0:19,0:19:47.98:0,48,431	0/0:15,0:14:14.50:0,15,58	0/0:12,0:12:18.37:0,18,81	0/0:5,0:5:10.26:0,10,39	0/0:5,0:5:5.42:0,5,27	0/0:2,0:2:6:0,6,55	./.	1/1:4,10:14:30.08:336,30,0	0/0:9,0:9:24.01:0,24,220	0/1:18,0:18:15.46:15,0,61	0/0:14,0:14:36.02:0,36,329
chr10	84945993	.	ATT	A	4146.24	PASS	AB=0.538;AC=17;AF=0.304;AN=56;BaseQRankSum=-0.580;DP=600;FS=1.155;HRun=12;HaplotypeScore=86.5423;InbreedingCoeff=0.7328;MQ=66.82;MQ0=1;MQRankSum=-0.066;QD=17.42;ReadPosRankSum=0.918;VQSLOD=2.9473;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,3:42:9.80:10,0,184	0/1:0,1:10:7.83:8,0,47	0/0:11,0:10:13.06:0,13,130	0/0:12,0:10:18.01:0,18,227	0/0:21,0:21:51.17:0,51,749	0/0:17,0:20:53.64:0,54,715	0/1:3,3:14:57.70:62,0,58	1/1:4,22:27:68.88:683,69,0	0/0:23,0:23:58.72:0,59,795	0/0:4,0:26:56.95:0,57,218	0/0:3,0:18:38.25:0,38,147	0/0:16,0:17:44.61:0,45,596	0/0:19,0:20:53.62:0,54,708	0/0:16,0:16:45.13:0,45,628	0/0:3,1:26:17.89:0,18,140	0/0:2,0:21:50.42:0,50,211	0/0:2,1:16:2.93:0,3,90	0/0:10,0:13:30.08:0,30,411	1/1:7,15:23:53.58:511,54,0	1/1:5,30:35:77.83:775,78,0	1/1:1,23:23:57.12:580,57,0	1/1:2,13:15:39.06:396,39,0	0/0:22,1:25:34.66:0,35,799	0/0:13,0:14:38.61:0,39,526	1/1:2,15:17:36.07:366,36,0	0/0:25,0:30:79.19:0,79,1010	1/1:4,24:30:77.63:756,78,0	0/0:30,0:31:80.76:0,81,1165
chr10	84946797	.	T	TA	666.89	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.393;DP=622;FS=7.335;HRun=8;HaplotypeScore=60.0579;InbreedingCoeff=0.9824;MQ=78.81;MQ0=0;MQRankSum=-1.629;QD=29.00;ReadPosRankSum=0.862;VQSLOD=3.8647;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,132,1208	0/0:8,0:8:24.01:0,24,220	0/0:16,0:16:32.95:0,33,288	0/0:15,0:15:15.30:0,15,201	0/0:23,0:23:63.03:0,63,576	0/0:14,0:14:42:0,42,379	0/0:24,0:24:69.02:0,69,626	0/0:42,0:42:99:0,114,1037	0/0:20,0:20:51.02:0,51,466	0/0:25,0:25:54.01:0,54,492	0/0:25,0:25:75.02:0,75,681	0/0:22,0:22:63.03:0,63,577	0/0:19,0:19:54.03:0,54,494	0/0:17,0:17:51.03:0,51,467	0/0:19,0:19:42:0,42,380	0/0:11,0:11:33.02:0,33,302	0/0:28,0:28:72.04:0,72,659	0/0:26,0:26:75.03:0,75,686	0/0:25,0:25:63.03:0,63,577	0/0:30,0:30:87.04:0,87,796	0/0:21,0:21:54.02:0,54,494	0/0:18,0:18:48.03:0,48,439	0/0:23,0:23:66:0,66,594	0/0:31,0:31:80.97:0,81,728	1/1:0,23:23:66.20:762,66,0	0/0:21,0:21:60.03:0,60,549	0/0:14,0:14:36:0,36,324	0/0:12,0:12:33.02:0,33,302
chr10	84946973	.	G	GGTGT	1415.21	PASS	AB=0.934;AC=31;AF=0.646;AN=48;BaseQRankSum=-1.916;DP=534;FS=2.241;HRun=0;HaplotypeScore=127.5547;InbreedingCoeff=0.3026;MQ=57.06;MQ0=13;MQRankSum=0.243;QD=3.61;ReadPosRankSum=-2.568;VQSLOD=2.1193;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:0:0,0,0	0/0:5,0:5:0:0,0,0	./.	./.	./.	0/1:10,0:10:9.97:44,0,10	1/1:32,0:31:22.83:201,23,0	0/1:26,0:26:0:0,0,0	0/1:14,4:22:37.01:74,0,37	0/1:20,0:18:0:0,0,0	1/1:12,0:12:4.23:26,4,0	1/1:16,5:24:3.48:71,3,0	1/1:19,0:20:5.28:30,5,0	0/1:14,0:14:6.65:90,0,7	0/0:12,0:13:6.01:0,6,56	0/0:9,0:12:5.90:0,6,44	0/0:16,0:28:21.02:0,21,195	0/1:16,3:21:32.89:98,0,33	1/1:17,0:17:2.98:21,3,0	1/1:17,0:15:2.99:23,3,0	1/1:51,0:50:21.10:191,21,0	1/1:11,0:9:6.02:98,6,0	./.	1/1:13,10:25:11.34:188,11,0	0/0:12,0:16:5.95:0,6,46	1/1:9,0:9:9.48:88,9,0	1/1:15,0:15:14.87:110,15,0	1/1:13,0:13:10.01:201,10,0
chr10	84946983	.	T	TAG	2222.89	PASS	AB=0.845;AC=9;AF=0.161;AN=56;BaseQRankSum=8.094;DP=559;FS=16.252;HRun=0;HaplotypeScore=88.2869;InbreedingCoeff=-0.1909;MQ=51.45;MQ0=15;MQRankSum=-3.775;QD=9.66;ReadPosRankSum=1.186;VQSLOD=2.2921;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:20,19:38:10.26:10,0,262	0/0:7,0:7:17.96:0,18,243	0/0:18,0:10:27.09:0,27,415	0/0:20,0:11:27.04:0,27,402	0/0:12,0:12:30.10:0,30,450	0/0:12,0:12:24.04:0,24,320	0/1:17,17:33:68.74:262,0,69	0/1:27,0:27:99:506,0,346	0/0:22,0:22:25.09:0,25,322	0/0:23,0:21:63.20:0,63,915	0/0:19,0:19:32.57:0,33,471	0/0:23,0:23:41.01:0,41,562	0/0:19,0:19:31.05:0,31,393	0/0:13,0:13:27.01:0,27,315	0/0:16,0:15:36.09:0,36,505	0/0:15,0:15:39.10:0,39,543	0/0:30,0:30:66.13:0,66,833	0/0:23,0:23:52.39:0,52,711	0/1:18,0:18:99:332,0,221	0/1:7,6:12:33.12:111,0,33	0/1:45,6:50:99:580,0,218	0/1:11,1:10:40.33:40,0,84	0/0:8,0:7:15.05:0,15,225	0/0:26,0:24:22.57:0,23,274	0/1:20,0:21:40.89:259,0,41	0/0:11,0:11:32.94:0,33,433	0/1:11,2:13:99:261,0,149	0/0:12,0:12:30.03:0,30,357
chr10	84948742	.	C	CTCCCTCCCT	4770.24	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=0.639;DP=394;FS=6.857;HRun=0;HaplotypeScore=131.8493;InbreedingCoeff=0.9329;MQ=78.26;MQ0=3;MQRankSum=-8.179;QD=40.77;ReadPosRankSum=-4.301;VQSLOD=3.1510;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,14:28:21.07:667,21,0	0/0:8,0:8:18.05:0,18,441	0/0:25,0:20:26.81:0,27,445	0/0:26,0:22:2.03:0,2,219	0/0:14,0:14:21.07:0,21,539	0/0:15,0:15:33.11:0,33,884	1/1:13,0:13:27.09:737,27,0	1/1:18,0:18:30.08:745,30,0	0/0:11,0:11:27.09:0,27,722	0/0:8,0:8:21.07:0,21,534	0/0:8,0:8:14.75:0,15,408	0/0:12,0:12:27.09:0,27,726	0/0:7,0:7:18.06:0,18,467	0/0:11,0:11:30.09:0,30,719	0/0:23,0:23:60.16:0,60,1422	0/0:12,0:12:27.09:0,27,743	0/0:18,0:18:27.07:0,27,674	0/0:12,0:12:27.09:0,27,751	1/1:12,0:12:15.03:331,15,0	1/1:11,0:11:27.06:946,27,0	1/1:18,0:19:7.61:287,8,0	1/1:4,0:4:12.04:408,12,0	0/0:10,0:10:21.07:0,21,572	0/0:13,0:13:30.10:0,30,842	0/0:11,0:11:15.05:0,15,421	0/0:14,0:14:33.10:0,33,838	1/1:12,0:12:20.90:650,21,0	0/0:19,0:19:45.15:0,45,1267
chr10	84948761	.	T	TCC	1585.16	PASS	AB=0.897;AC=12;AF=0.214;AN=56;BaseQRankSum=8.262;DP=367;FS=3.391;HRun=1;HaplotypeScore=92.1333;InbreedingCoeff=0.3214;MQ=58.62;MQ0=8;MQRankSum=-7.568;QD=14.81;ReadPosRankSum=-1.888;VQSLOD=0.2429;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,1:20:99:180,0,240	0/0:8,0:8:23.74:0,24,297	0/0:18,0:10:24.37:0,24,324	0/0:18,0:11:5.05:0,5,172	0/0:13,0:13:33.09:0,33,481	0/0:12,0:12:36.07:0,36,474	1/1:10,0:10:14.34:290,14,0	0/1:13,0:13:99:239,0,150	0/0:11,0:11:33.10:0,33,483	0/0:14,0:14:9.69:0,10,402	0/1:10,0:10:2.32:2,0,186	0/0:11,0:11:30.10:0,30,450	0/0:8,0:8:24.08:0,24,364	0/0:14,0:14:33.10:0,33,471	0/0:23,0:23:66.20:0,66,901	0/0:13,0:13:31.65:0,32,475	0/0:15,0:15:14.68:0,15,554	0/0:13,0:13:38.39:0,38,519	0/1:11,0:12:99:144,0,153	0/1:8,4:12:45.17:350,0,45	0/1:9,3:12:29.28:158,0,29	1/1:7,1:8:14.64:182,15,0	0/0:9,0:9:27.09:0,27,408	0/0:13,0:13:39.13:0,39,597	0/0:14,0:14:17.94:0,18,252	0/0:17,0:17:51.17:0,51,766	1/1:8,0:10:5.89:197,6,0	0/0:16,0:16:48.16:0,48,722
chr10	84948762	.	CTT	C	1528.01	PASS	AB=0.762;AC=11;AF=0.196;AN=56;BaseQRankSum=8.214;DP=364;FS=3.510;HRun=2;HaplotypeScore=92.7234;InbreedingCoeff=0.4027;MQ=58.38;MQ0=8;MQRankSum=-8.208;QD=16.43;ReadPosRankSum=-1.279;VQSLOD=0.7058;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:99:105,0,180	0/0:8,0:8:24.08:0,24,447	0/0:18,0:10:24.38:0,24,346	0/0:17,0:10:5.05:0,5,172	0/0:13,0:13:33.11:0,33,591	0/0:12,0:12:36.12:0,36,589	1/1:2,8:10:16.17:331,16,0	0/1:6,5:11:99:239,0,206	0/0:11,0:11:33.11:0,33,571	0/0:15,0:15:39.01:0,39,546	0/0:10,0:10:24.08:0,24,359	0/0:11,0:11:33.09:0,33,539	0/0:8,0:8:24.08:0,24,423	0/0:14,0:14:36.11:0,36,620	0/0:23,0:23:69.21:0,69,1192	0/0:13,0:13:31.57:0,32,634	0/0:15,0:15:13.45:0,13,698	0/0:13,0:13:38.45:0,38,598	0/1:8,3:11:99:165,0,156	0/1:5,7:12:57.03:290,0,57	0/1:7,5:12:29.34:156,0,29	1/1:1,7:8:15.43:153,15,0	0/0:9,0:9:27.09:0,27,502	0/0:13,0:13:39.13:0,39,737	0/0:14,0:14:17.09:0,17,230	0/0:18,0:18:54.18:0,54,950	1/1:2,8:10:23.72:253,24,0	0/0:16,0:16:48.16:0,48,895
chr10	84948768	.	TC	T	375.35	PASS	AB=0.944;AC=7;AF=0.125;AN=56;BaseQRankSum=8.763;DP=347;FS=3.291;HRun=2;HaplotypeScore=89.4892;InbreedingCoeff=-0.0364;MQ=55.29;MQ0=9;MQRankSum=-7.033;QD=4.94;ReadPosRankSum=0.377;VQSLOD=0.6592;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:19,1:20:89.22:89,0,178	0/0:8,0:8:24.08:0,24,354	0/0:15,0:7:17.18:0,17,201	0/0:13,0:5:12.01:0,12,128	0/0:11,0:11:29.94:0,30,443	0/0:12,0:12:36.12:0,36,526	0/1:9,0:9:47.04:52,0,47	0/1:8,0:8:70.57:71,0,155	0/0:10,0:10:30.10:0,30,442	0/0:14,0:14:36.11:0,36,496	0/0:11,0:11:24.06:0,24,301	0/0:11,0:11:33.11:0,33,472	0/0:7,0:7:21.07:0,21,309	0/0:12,0:12:27.09:0,27,403	0/0:23,0:23:69.20:0,69,968	0/0:13,0:13:35.47:0,35,511	0/0:15,0:15:39.53:0,40,535	0/0:14,0:14:35.45:0,35,563	0/1:8,0:8:6.36:6,0,155	0/1:8,4:12:51.86:163,0,52	0/0:6,3:11:8.73:0,9,94	0/1:9,1:10:2.26:61,0,2	0/0:10,0:10:27.09:0,27,399	0/0:13,0:13:39.13:0,39,579	0/0:14,0:14:23.82:0,24,242	0/0:18,0:18:54.18:0,54,781	0/1:9,0:9:39.23:60,0,39	0/0:16,0:16:48.16:0,48,712
chr10	84948772	.	TC	T	535.41	PASS	AB=0.767;AC=9;AF=0.161;AN=56;BaseQRankSum=8.487;DP=338;FS=4.361;HRun=2;HaplotypeScore=89.3552;InbreedingCoeff=-0.1570;MQ=51.79;MQ0=9;MQRankSum=-6.742;QD=5.30;ReadPosRankSum=-0.384;VQSLOD=0.4857;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:48.51:49,0,179	0/0:8,0:8:24.08:0,24,354	0/0:11,0:4:6.02:0,6,88	0/0:12,0:4:8.70:0,9,85	0/0:11,0:11:29.93:0,30,425	0/0:11,0:11:33.11:0,33,483	0/1:3,4:10:20.36:94,0,20	0/1:4,4:8:99:106,0,155	0/0:11,0:11:33.10:0,33,468	0/0:14,0:14:36.11:0,36,497	0/0:11,0:11:21.05:0,21,258	0/0:11,0:11:33.10:0,33,465	0/0:7,0:7:21.07:0,21,309	0/0:12,0:12:30.10:0,30,436	0/0:23,0:23:69.23:0,69,1016	0/0:12,0:12:32.62:0,33,487	0/0:14,0:14:39.13:0,39,565	0/0:14,0:14:35.41:0,35,541	0/1:6,1:8:39.89:40,0,132	0/1:5,6:11:48.77:184,0,49	0/1:9,2:11:1.93:2,0,38	0/1:6,2:11:9.92:50,0,10	0/0:9,0:9:27.09:0,27,398	0/0:12,0:12:36.12:0,36,535	0/1:13,0:13:3.12:3,0,153	0/0:18,0:18:54.18:0,54,796	0/1:1,3:9:37.25:139,0,37	0/0:16,0:16:48.16:0,48,712
chr10	84948773	.	CCTT	C	185.28	PASS	AB=0.916;AC=5;AF=0.089;AN=56;BaseQRankSum=6.778;DP=336;FS=5.039;HRun=0;HaplotypeScore=101.0660;InbreedingCoeff=-0.1026;MQ=51.52;MQ0=9;MQRankSum=-6.134;QD=3.86;ReadPosRankSum=0.628;VQSLOD=1.4796;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:35.47:0,35,391	0/0:8,0:8:24.08:0,24,467	0/0:10,0:3:6:0,6,85	0/0:11,0:3:6.01:0,6,64	0/0:11,0:11:30.10:0,30,538	0/0:11,0:11:33.11:0,33,497	0/1:9,0:9:70.71:71,0,71	0/0:8,0:8:21.92:0,22,289	0/0:11,0:11:33.11:0,33,548	0/0:14,0:14:36.11:0,36,540	0/0:10,0:10:21.07:0,21,310	0/0:11,0:11:30.10:0,30,511	0/0:7,0:7:21.07:0,21,372	0/0:12,0:12:30.10:0,30,601	0/0:23,0:23:69.23:0,69,1244	0/0:12,0:12:32.88:0,33,597	0/0:14,0:14:39.10:0,39,728	0/0:14,0:14:31.96:0,32,618	0/1:8,0:8:5.40:5,0,114	0/0:10,0:10:28.28:0,28,211	0/1:9,2:11:22.99:23,0,34	0/1:7,4:11:59.98:128,0,60	0/0:9,0:9:27.09:0,27,505	0/0:12,0:12:36.12:0,36,696	0/0:14,0:14:19.14:0,19,175	0/0:19,0:19:56.92:0,57,988	0/1:9,0:9:70.69:71,0,89	0/0:16,0:16:48.16:0,48,876
chr10	84948782	.	CTTA	C	205.52	PASS	AB=0.862;AC=9;AF=0.167;AN=54;BaseQRankSum=6.662;DP=294;FS=4.011;HRun=0;HaplotypeScore=100.0466;InbreedingCoeff=0.3194;MQ=49.64;MQ0=9;MQRankSum=-5.401;QD=4.03;ReadPosRankSum=0.802;VQSLOD=1.7731;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:1.85:0,2,181	0/0:7,0:7:17.85:0,18,221	0/0:7,0:2:5.84:0,6,34	./.	0/0:10,0:10:26.20:0,26,263	0/0:12,0:12:28.19:0,28,193	0/1:7,2:9:5.83:116,0,6	0/0:4,0:4:3.99:0,4,11	0/0:10,0:10:28.01:0,28,249	0/0:14,0:14:4.28:0,4,166	0/0:9,0:9:22.60:0,23,168	0/0:10,0:10:28.66:0,29,256	0/0:6,0:6:16.97:0,17,171	0/0:13,0:13:32.55:0,33,371	0/0:21,0:21:60.57:0,61,621	0/0:11,0:11:31.27:0,31,334	0/0:14,0:14:38.06:0,38,434	0/0:11,0:11:21.89:0,22,262	1/1:3,0:3:3.96:27,4,0	0/0:9,1:10:6.84:0,7,84	1/1:9,0:9:2.11:14,2,0	0/1:7,3:10:38.49:97,0,38	0/0:7,0:7:20.54:0,21,205	0/0:11,0:11:32.59:0,33,349	1/1:11,0:11:0.04:22,0,0	0/0:18,0:18:45.18:0,45,428	0/1:9,0:9:26.52:54,0,27	0/0:9,0:9:26.49:0,26,235
chr10	84949543	.	TCACACACACA	T	885.15	PASS	AB=0.779;AC=7;AF=0.130;AN=54;BaseQRankSum=2.036;DP=493;FS=16.037;HRun=0;HaplotypeScore=141.7780;InbreedingCoeff=0.2353;MQ=73.70;MQ0=6;MQRankSum=-5.177;QD=6.76;ReadPosRankSum=-2.163;VQSLOD=1.4714;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:28:30.05:0,30,654	0/0:4,0:4:8.39:0,8,273	./.	0/0:28,0:16:3.01:0,3,37	0/0:13,0:13:12.02:0,12,431	0/0:15,0:15:24.05:0,24,873	0/1:14,17:31:1.74:338,0,2	1/1:11,0:11:5.84:60,6,0	0/0:20,0:20:30.54:0,31,1008	0/0:12,0:20:34.63:0,35,1209	0/0:7,0:10:3.01:0,3,131	0/0:6,0:8:9.03:0,9,185	0/0:15,0:15:21.02:0,21,590	0/0:23,0:25:45.08:0,45,1434	0/0:13,0:20:15.03:0,15,484	0/0:6,0:9:6.91:0,7,183	0/0:20,0:29:25.88:0,26,785	0/0:17,0:17:33.05:0,33,1171	0/1:21,0:21:24.61:31,0,25	0/0:3,4:7:2.74:0,3,13	0/1:28,13:41:67.02:71,0,67	0/1:13,3:16:0.04:170,0,0	0/0:6,0:11:8.64:0,9,274	0/0:25,0:26:33.02:0,33,1106	0/0:8,0:9:9.03:0,9,398	0/0:9,0:8:6.49:0,6,273	0/1:5,6:11:7.88:341,0,8	0/0:9,0:10:9.01:0,9,183
chr10	84949778	.	CTG	C	625.04	PASS	AB=0.908;AC=13;AF=0.271;AN=48;BaseQRankSum=2.661;DP=597;FS=2.819;HRun=0;HaplotypeScore=74.6022;InbreedingCoeff=0.3233;MQ=61.87;MQ0=27;MQRankSum=-0.763;QD=3.40;ReadPosRankSum=2.255;VQSLOD=2.0170;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:8.97:0,9,72	./.	./.	0/0:73,0:18:0:0,0,0	0/0:7,0:7:3.01:0,3,43	0/0:10,0:10:6:0,6,69	0/0:30,0:30:5.52:0,6,55	0/0:19,0:19:15.04:0,15,174	0/1:18,2:20:12.14:12,0,205	1/1:13,1:15:8.85:75,9,0	./.	0/1:12,2:14:15.10:15,0,205	0/0:14,0:14:21.07:0,21,306	0/1:13,1:14:6.09:6,0,309	1/1:13,12:24:24.06:265,24,0	1/1:10,8:19:17.50:179,17,0	1/1:22,8:30:14.87:165,15,0	0/1:18,4:22:53.39:53,0,238	0/0:14,0:13:9.91:0,10,106	./.	0/0:61,0:57:23.64:0,24,190	0/0:13,0:16:5.49:0,5,24	0/0:6,0:6:3.01:0,3,42	0/0:24,0:25:15.94:0,16,369	0/0:11,0:11:6.01:0,6,55	0/1:24,0:23:4.26:4,0,161	0/0:14,0:13:21.47:0,21,230	0/0:5,0:4:3.01:0,3,45
chr10	84949906	.	C	CTAA	6498.62	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-10.888;DP=583;FS=8.104;HRun=0;HaplotypeScore=88.7746;InbreedingCoeff=0.9954;MQ=84.44;MQ0=0;MQRankSum=-2.150;QD=45.76;ReadPosRankSum=-0.778;VQSLOD=6.3973;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:99:0,132,2060	0/0:11,0:11:30.10:0,30,467	0/0:24,0:24:69.23:0,69,1075	0/0:21,0:21:57.05:0,57,842	0/0:9,0:9:21.07:0,21,336	0/0:18,0:18:45.15:0,45,721	1/1:4,17:22:39.13:861,39,0	1/1:3,13:16:39.13:859,39,0	0/0:26,0:26:72.23:0,72,1122	0/0:23,0:23:54.18:0,54,845	0/0:12,0:12:24.08:0,24,382	0/0:22,0:22:54.18:0,54,868	0/0:22,0:22:66.23:0,66,1058	0/0:16,0:16:42.13:0,42,651	0/0:29,0:29:78.27:0,78,1254	0/0:15,0:15:45.14:0,45,700	0/0:26,0:26:69.19:0,69,1058	0/0:24,0:24:69.24:0,69,1109	1/1:4,6:10:27.09:533,27,0	1/1:2,11:13:33.03:606,33,0	1/1:5,40:51:99:2311,111,0	1/1:4,12:18:44.94:733,45,0	0/0:11,0:11:30.10:0,30,480	0/0:33,0:33:87.30:0,87,1385	0/0:14,0:14:39.13:0,39,627	0/0:29,0:29:84.29:0,84,1347	1/1:0,12:12:27.09:596,27,0	0/0:6,0:6:15.05:0,15,241
chr10	84950066	.	AACACACACACACACACACACACACACACACACACACACAC	A	212.42	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.031;DP=551;FS=17.651;HRun=0;HaplotypeScore=428.0897;InbreedingCoeff=0.7281;MQ=58.40;MQ0=20;MQRankSum=-3.796;QD=5.06;ReadPosRankSum=-3.124;VQSLOD=0.3026;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,20:42:8.94:295,9,0	0/0:9,0:11:21.07:0,21,2480	0/0:32,0:8:0.94:0,1,1	0/0:40,0:12:12.41:0,12,633	0/0:21,0:21:30.57:0,31,3228	0/0:12,0:12:27.07:0,27,2560	0/0:25,0:24:50.67:0,51,3828	0/0:18,0:17:30.09:0,30,2308	0/0:16,0:16:33.11:0,33,2602	0/0:16,0:14:36.12:0,36,3370	0/0:10,0:10:21.54:0,22,2769	0/0:15,0:14:30.55:0,31,3375	0/0:7,0:8:12.04:0,12,1631	0/0:14,0:14:15.05:0,15,1592	0/0:9,0:11:10.60:0,11,983	0/0:12,0:16:21.07:0,21,1836	0/0:28,0:28:48.64:0,49,4057	0/0:25,0:23:53.17:0,53,5359	0/0:12,0:12:27.09:0,27,2947	0/0:11,0:11:18.06:0,18,1653	0/0:58,0:56:94.73:0,95,8759	0/0:9,0:12:21.54:0,22,1975	0/0:14,0:14:33.11:0,33,3592	0/0:32,0:32:55.41:0,55,6700	0/0:15,0:15:15.52:0,16,1361	0/0:19,0:19:38.34:0,38,3246	0/0:8,0:7:12.04:0,12,802	0/0:7,0:6:18.06:0,18,2491
chr10	84951529	.	CA	C	1253.31	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=15.700;DP=599;FS=6.520;HRun=2;HaplotypeScore=76.0333;InbreedingCoeff=0.9212;MQ=88.98;MQ0=0;MQRankSum=-2.443;QD=7.08;ReadPosRankSum=0.805;VQSLOD=0.7192;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.22:0,96,1334	0/0:10,0:10:30.10:0,30,459	0/0:23,0:23:66.16:0,66,930	0/0:21,0:21:61.83:0,62,883	0/0:19,0:19:54.15:0,54,775	0/0:21,0:21:60.19:0,60,895	1/1:26,0:26:40.19:231,40,0	1/1:22,0:22:16.81:99,17,0	0/0:21,0:21:60.18:0,60,886	0/0:27,0:27:81.23:0,81,1202	0/0:15,0:15:19.37:0,19,533	0/0:16,0:16:48.16:0,48,732	0/0:18,0:18:51.17:0,51,776	0/0:22,0:22:66.22:0,66,989	0/0:15,0:15:45.14:0,45,665	0/0:18,0:18:54.18:0,54,824	0/0:29,0:29:87.16:0,87,1173	0/0:22,0:22:63.19:0,63,941	1/1:19,1:20:25.55:174,26,0	1/1:16,1:17:39.62:169,40,0	1/1:38,2:40:92.54:414,93,0	1/1:32,1:33:6.01:229,6,0	0/0:20,0:20:57.19:0,57,862	0/0:20,0:20:60.16:0,60,868	0/0:20,0:20:60.16:0,60,852	0/0:23,0:23:69.23:0,69,1033	0/1:19,0:19:1.03:123,0,1	0/0:10,0:10:30.10:0,30,454
chr10	84951530	.	AC	A	5379.74	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.383;DP=597;FS=5.209;HRun=5;HaplotypeScore=62.6244;InbreedingCoeff=0.9998;MQ=89.63;MQ0=0;MQRankSum=-2.785;QD=30.57;ReadPosRankSum=-0.221;VQSLOD=5.3029;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.22:0,84,1096	0/0:10,0:10:30.10:0,30,410	0/0:23,0:23:63.19:0,63,834	0/0:22,0:22:62.66:0,63,801	0/0:19,0:19:51.16:0,51,681	0/0:21,0:21:60.19:0,60,805	1/1:0,25:25:72.21:817,72,0	1/1:1,21:22:63.17:707,63,0	0/0:21,0:21:60.19:0,60,805	0/0:27,0:27:78.26:0,78,1067	0/0:13,0:13:36.12:0,36,490	0/0:16,0:16:48.15:0,48,640	0/0:18,0:18:54.15:0,54,704	0/0:22,0:22:66.20:0,66,885	0/0:16,0:16:45.12:0,45,584	0/0:19,0:19:57.17:0,57,748	0/0:27,0:27:66.22:0,66,903	0/0:22,0:22:63.20:0,63,845	1/1:1,18:19:57.15:635,57,0	1/1:1,16:17:48.10:531,48,0	1/1:4,38:42:99:1247,111,0	1/1:5,27:32:82.94:900,83,0	0/0:21,0:21:63.16:0,63,790	0/0:20,0:20:54.14:0,54,718	0/0:20,0:20:51.16:0,51,677	0/0:23,0:23:69.21:0,69,912	1/1:2,17:19:48.14:544,48,0	0/0:10,0:10:30.08:0,30,392
chr10	84954748	.	CATT	C	178.64	PASS	AB=0.969;AC=7;AF=0.135;AN=52;BaseQRankSum=2.137;DP=386;FS=3.316;HRun=0;HaplotypeScore=107.7433;InbreedingCoeff=0.3314;MQ=34.28;MQ0=3;MQRankSum=-4.827;QD=3.72;ReadPosRankSum=2.815;VQSLOD=2.1617;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:29.20:0,29,387	0/1:7,0:7:1.29:1,0,20	0/0:9,0:3:6.02:0,6,144	0/0:11,0:7:21.07:0,21,471	0/0:21,0:21:22.36:0,22,478	0/0:16,0:16:26.35:0,26,399	0/1:8,0:8:0.23:0,0,0	0/1:9,2:6:37.57:129,0,38	0/0:18,0:18:24.67:0,25,458	0/0:18,0:17:42.70:0,43,865	0/0:7,0:7:10.80:0,11,173	0/0:22,0:22:21.03:0,21,664	0/0:22,0:22:24.30:0,24,316	0/0:18,0:18:22.27:0,22,446	0/0:26,0:26:44.83:0,45,677	0/0:17,0:17:23.04:0,23,416	0/0:9,0:9:15.89:0,16,336	0/0:5,0:5:10.93:0,11,229	0/1:8,0:8:47.44:60,0,47	0/0:12,0:11:2.01:0,2,6	./.	./.	0/0:14,0:14:24.89:0,25,363	0/0:15,0:15:14.88:0,15,305	0/1:7,0:7:0:1,0,0	0/0:27,0:27:74.70:0,75,1521	1/1:6,1:7:5.68:92,6,0	0/0:7,0:7:18.91:0,19,380
chr10	84954938	.	GCACACA	G	2482.86	PASS	AB=0.657;AC=10;AF=0.179;AN=56;BaseQRankSum=4.050;DP=707;FS=1.912;HRun=0;HaplotypeScore=172.4619;InbreedingCoeff=0.7511;MQ=51.70;MQ0=10;MQRankSum=-6.497;QD=22.37;ReadPosRankSum=0.223;VQSLOD=3.4679;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:30:69.18:0,69,958	1/1:7,2:10:12.03:193,12,0	0/0:41,0:24:12.04:0,12,295	0/0:41,0:22:18.39:0,18,667	0/0:16,0:18:39.12:0,39,1154	0/0:25,0:30:60.19:0,60,1695	0/0:15,0:25:14.94:0,15,242	0/0:25,0:27:54.18:0,54,1326	0/0:26,0:28:63.19:0,63,1887	0/1:15,7:24:12.49:699,0,12	1/1:11,4:15:12.04:220,12,0	0/0:30,0:30:65.66:0,66,2004	0/0:25,0:27:54.12:0,54,1584	0/0:19,0:26:72.24:0,72,2018	0/1:8,17:27:6.24:738,0,6	1/1:13,7:20:15.05:316,15,0	1/1:7,8:15:24.08:480,24,0	0/0:16,0:19:39.13:0,39,1169	0/0:17,0:19:35.15:0,35,771	0/0:15,0:17:15.05:0,15,375	0/0:28,0:33:32.32:0,32,746	0/0:19,0:22:21:0,21,443	0/0:24,0:23:45.12:0,45,1401	0/0:47,0:51:89.57:0,90,2890	0/0:4,0:16:15.05:0,15,390	0/0:36,0:37:68.33:0,68,2611	0/0:7,0:19:42.14:0,42,1059	0/0:10,0:11:21.07:0,21,552
chr10	84955026	.	T	TA	2876.48	PASS	AB=0.826;AC=14;AF=0.250;AN=56;BaseQRankSum=-7.089;DP=625;FS=0.814;HRun=11;HaplotypeScore=74.3267;InbreedingCoeff=0.7907;MQ=64.14;MQ0=1;MQRankSum=3.384;QD=17.02;ReadPosRankSum=0.550;VQSLOD=4.4800;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,28:40:60.43:750,60,0	1/1:2,10:12:6.83:251,7,0	0/1:9,0:9:9.51:10,0,18	0/0:8,0:8:3.76:0,4,28	0/0:28,0:28:77.69:0,78,603	0/0:29,0:30:82.73:0,83,633	0/0:16,0:16:35.85:0,36,278	0/0:20,0:20:47.80:0,48,370	0/0:24,0:25:44.66:0,45,470	1/1:7,22:30:45.73:626,46,0	0/1:7,7:15:2.18:161,0,2	0/0:32,0:32:65.64:0,66,508	0/0:25,0:26:61.77:0,62,466	0/0:22,1:24:46.77:0,47,349	1/1:8,11:19:18.84:367,19,0	1/1:6,18:24:30.87:495,31,0	1/1:1,18:19:21.86:403,22,0	0/0:13,1:15:4.47:0,4,208	0/0:19,0:22:47.92:0,48,341	0/0:26,0:26:53.72:0,54,417	0/0:29,0:29:71.67:0,72,557	0/0:24,0:24:65.73:0,66,511	0/0:19,0:19:35.81:0,36,279	0/0:23,0:23:62.75:0,63,488	0/0:14,0:14:32.84:0,33,255	0/0:24,1:24:23.32:0,23,364	0/0:20,0:20:50.78:0,51,395	0/0:28,0:30:75.75:0,76,569
chr10	84956328	.	CATGAAAGTA	C	914.92	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.471;DP=488;FS=2.643;HRun=0;HaplotypeScore=128.8488;InbreedingCoeff=0.9807;MQ=81.20;MQ0=0;MQRankSum=-5.320;QD=70.38;ReadPosRankSum=1.773;VQSLOD=3.9093;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.27:0,84,3793	0/0:6,0:6:18.06:0,18,875	0/0:18,0:18:45.15:0,45,1898	0/0:9,0:9:23.75:0,24,890	0/0:29,0:28:81.28:0,81,3690	0/0:12,0:12:36.12:0,36,1679	0/0:8,0:8:21.07:0,21,860	0/0:25,0:25:69.23:0,69,3028	0/0:15,0:15:45.15:0,45,2189	0/0:27,0:27:78.27:0,78,3321	0/0:30,0:30:84.29:0,84,3972	0/0:16,0:16:45.14:0,45,1878	0/0:13,0:13:39.13:0,39,1733	0/0:11,0:11:33.11:0,33,1516	0/0:14,0:14:42.14:0,42,1753	0/0:12,0:11:36.12:0,36,1751	0/0:23,0:23:66.23:0,66,3101	0/0:12,0:12:36.12:0,36,1747	0/0:14,0:14:42.14:0,42,2033	0/0:25,0:25:69.71:0,70,3299	0/0:16,0:16:48.16:0,48,2255	0/0:12,0:12:33.11:0,33,1464	0/0:29,0:29:87.30:0,87,3925	0/0:12,0:12:36.12:0,36,1606	1/1:1,12:13:33.11:1010,33,0	0/0:24,0:24:72.25:0,72,3325	0/0:28,0:28:81.28:0,81,3685	0/0:7,0:7:21.07:0,21,1021
chr10	84956653	.	C	CAAA	1706.90	PASS	AB=0.913;AC=13;AF=0.310;AN=42;BaseQRankSum=6.469;DP=288;FS=9.422;HRun=10;HaplotypeScore=59.9469;InbreedingCoeff=0.7700;MQ=56.19;MQ0=9;MQRankSum=-5.650;QD=16.90;ReadPosRankSum=-4.317;VQSLOD=-0.2801;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:8,0:5:5.49:0,5,52	0/0:12,0:7:3.56:0,4,66	0/0:18,0:17:48.13:0,48,571	0/0:9,0:9:21.03:0,21,242	1/1:8,14:23:42.12:700,42,0	0/1:16,0:20:11.41:147,0,11	0/0:6,0:6:7.36:0,7,107	./.	./.	0/0:9,0:9:24.05:0,24,289	0/0:10,0:9:21.06:0,21,255	0/0:9,0:9:18.03:0,18,219	./.	./.	./.	0/0:29,0:27:69.19:0,69,839	1/1:9,0:13:14.03:155,14,0	1/1:4,0:14:32.94:379,33,0	1/1:4,0:3:3.01:43,3,0	1/1:6,0:9:15.02:186,15,0	0/0:14,0:14:29.95:0,30,346	0/0:13,0:13:36.11:0,36,435	0/0:8,0:8:18.04:0,18,219	0/0:26,0:26:69.18:0,69,839	1/1:6,0:14:18.06:257,18,0	0/0:5,0:6:17.99:0,18,200
chr10	84956722	.	ATT	A	2470.29	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.500;DP=390;FS=0.454;HRun=8;HaplotypeScore=92.0774;InbreedingCoeff=0.9459;MQ=67.21;MQ0=1;MQRankSum=-11.979;QD=27.76;ReadPosRankSum=-1.103;VQSLOD=3.3803;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:13:34.51:250,35,0	1/1:0,6:7:20.80:226,21,0	0/0:13,0:7:10.58:0,11,126	0/0:8,0:6:5.48:0,5,99	0/0:35,0:35:96.33:0,96,1597	0/0:12,0:12:36.12:0,36,602	0/0:18,0:18:47.03:0,47,464	0/0:24,0:24:52.62:0,53,498	0/0:6,0:6:18.05:0,18,276	1/1:0,12:18:52.84:532,53,0	1/1:0,12:14:41.52:438,42,0	0/0:8,0:8:24.08:0,24,398	0/0:7,0:7:21.07:0,21,349	0/0:3,0:3:6.02:0,6,100	1/1:0,11:12:35.90:410,36,0	1/1:0,11:12:35.85:410,36,0	1/1:0,12:12:33.10:401,33,0	0/0:23,0:23:69.24:0,69,1154	0/0:13,0:13:30.06:0,30,315	0/0:18,0:18:47.99:0,48,496	0/0:6,0:6:15.51:0,16,173	0/0:14,0:14:35.99:0,36,363	0/0:13,0:13:36.12:0,36,603	0/0:7,0:7:21.07:0,21,352	0/0:8,0:8:20.82:0,21,211	0/0:24,0:24:69.24:0,69,1153	0/0:17,0:17:47.71:0,48,462	0/0:22,0:23:66.21:0,66,1068
chr10	84956761	.	TACTA	T	4813.33	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.790;DP=459;FS=5.695;HRun=0;HaplotypeScore=105.5674;InbreedingCoeff=0.9606;MQ=71.89;MQ0=0;MQRankSum=-9.002;QD=39.13;ReadPosRankSum=1.077;VQSLOD=5.0305;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,10:15:24.03:387,24,0	1/1:1,10:11:24.08:420,24,0	0/0:17,0:17:33.11:0,33,801	0/0:6,0:5:12:0,12,199	0/0:36,0:36:99:0,102,2502	0/0:15,0:15:42.13:0,42,1020	0/0:16,0:16:45.14:0,45,1096	0/0:21,0:21:42.13:0,42,1009	0/0:9,0:9:24.08:0,24,613	1/1:2,19:21:54.18:944,54,0	1/1:2,24:26:60.12:1013,60,0	0/0:7,0:7:21.07:0,21,536	0/0:10,0:10:24.08:0,24,612	0/0:2,0:2:3.01:0,3,76	1/1:3,17:20:48.16:841,48,0	1/1:4,12:16:33.11:578,33,0	1/1:1,13:13:36.12:630,36,0	0/0:23,0:23:63.22:0,63,1608	0/0:17,0:17:30.09:0,30,716	0/0:20,0:20:48.16:0,48,1225	0/0:10,0:10:27.09:0,27,689	0/0:15,0:15:45.15:0,45,1135	0/0:20,0:20:57.18:0,57,1362	0/0:12,0:12:33.10:0,33,789	0/0:11,0:11:30.10:0,30,766	0/0:24,0:24:60.19:0,60,1430	0/0:21,0:21:57.20:0,57,1444	0/0:24,0:24:63.22:0,63,1556
chr10	84957531	.	TA	T	3985.79	PASS	AB=0.721;AC=26;AF=0.464;AN=56;BaseQRankSum=4.771;DP=516;FS=2.191;HRun=11;HaplotypeScore=54.6486;InbreedingCoeff=0.8079;MQ=55.05;MQ0=4;MQRankSum=-1.718;QD=14.44;ReadPosRankSum=-0.826;VQSLOD=3.6330;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:36:74.27:0,74,391	1/1:3,4:8:14.02:104,14,0	0/0:4,0:2:3:0,3,29	0/0:5,0:3:9.02:0,9,91	0/0:21,0:21:54.61:0,55,577	0/0:19,2:21:35.51:0,36,577	1/1:1,11:12:26.97:222,27,0	1/1:12,12:23:8.78:257,9,0	0/0:19,0:19:48.07:0,48,486	1/1:5,26:29:71.77:581,72,0	1/1:4,15:17:3.93:232,4,0	0/0:21,1:22:32.37:0,32,521	0/0:12,1:13:11.43:0,11,318	0/0:12,0:12:30.03:0,30,296	1/1:1,14:15:32.95:271,33,0	0/1:2,11:13:2.02:192,0,2	1/1:4,23:26:59.92:492,60,0	0/0:19,0:19:47.97:0,48,485	1/1:12,14:22:9.95:288,10,0	1/1:6,22:28:59.80:480,60,0	1/1:2,15:17:35.95:296,36,0	1/1:0,6:6:14.98:123,15,0	0/0:13,1:13:5.40:0,5,243	0/0:16,0:15:36.09:0,36,384	0/0:3,0:24:54.13:0,54,283	0/1:24,3:26:4.96:5,0,552	1/1:5,18:23:53.92:443,54,0	0/0:13,0:13:30.08:0,30,320
chr10	84957723	.	G	GAAA	2157.81	PASS	AB=0.690;AC=24;AF=0.462;AN=52;BaseQRankSum=8.618;DP=379;FS=1.197;HRun=2;HaplotypeScore=106.8964;InbreedingCoeff=0.7602;MQ=103.90;MQ0=1;MQRankSum=-8.219;QD=34.25;ReadPosRankSum=-0.188;VQSLOD=1.8717;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:8:7.41:315,7,0	1/1:0,4:4:12.04:216,12,0	0/0:24,0:24:68.60:0,69,1196	0/0:24,0:24:63.19:0,63,1079	0/0:25,0:25:69.14:0,69,1166	0/0:31,0:31:93.32:0,93,1733	./.	1/1:4,0:4:2.96:20,3,0	0/0:27,0:27:75.24:0,75,1366	1/1:4,2:6:12.02:162,12,0	0/1:3,2:5:5.94:98,0,6	0/0:27,0:27:81.26:0,81,1459	0/0:26,0:26:72.25:0,72,1334	0/0:20,0:20:60.21:0,60,1117	1/1:2,5:7:21.05:320,21,0	0/1:2,2:4:44.21:108,0,44	1/1:0,3:3:9.03:164,9,0	0/0:15,0:15:45.15:0,45,839	1/1:3,1:4:9:103,9,0	1/1:1,4:5:15:234,15,0	1/1:2,0:2:2.97:20,3,0	./.	0/0:28,0:28:81.26:0,81,1476	0/0:34,0:34:99:0,102,1801	1/1:1,3:4:12.04:234,12,0	0/0:25,0:25:75.19:0,75,1301	1/1:0,3:6:18.06:363,18,0	0/0:9,0:9:27.09:0,27,503
chr10	84957724	.	T	TATAAACGTTAATTTCATTTCTGTAA	47688.27	PASS	AB=0.875;AC=29;AF=0.518;AN=56;BaseQRankSum=7.618;DP=529;FS=1.064;HRun=0;HaplotypeScore=335.1212;InbreedingCoeff=0.9027;MQ=89.27;MQ0=1;MQRankSum=-17.755;QD=222.84;ReadPosRankSum=0.763;VQSLOD=3.9049;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,6:23:66.18:5516,66,0	1/1:3,4:7:21.07:2333,21,0	0/0:25,0:25:65.25:0,65,3350	0/0:23,0:23:63.14:0,63,3046	0/0:25,0:25:69.21:0,69,3736	0/0:32,0:32:93.32:0,93,5830	1/1:16,0:16:48.09:3300,48,0	1/1:16,0:16:42.11:1476,42,0	0/0:27,0:27:75.26:0,75,4638	1/1:16,2:16:45.15:4343,45,0	1/1:14,2:16:39.12:3541,39,0	0/0:27,0:27:81.26:0,81,5088	0/0:26,0:26:78.23:0,78,4808	0/0:20,0:20:60.21:0,60,3748	1/1:10,5:15:42.14:4305,42,0	0/1:12,2:14:99:3559,0,168	1/1:9,3:12:30.10:2776,30,0	0/0:15,0:15:45.15:0,45,2898	1/1:11,1:12:33.10:2014,33,0	1/1:9,4:12:33.11:3231,33,0	1/1:4,0:4:3.01:47,3,0	1/1:7,1:6:18.02:1599,18,0	0/0:28,0:28:84.26:0,84,4861	0/0:33,0:33:99:0,99,5768	1/1:13,3:15:45.15:4209,45,0	0/0:25,0:25:72.25:0,72,4199	1/1:20,3:23:69.12:5440,69,0	0/0:9,0:9:27.09:0,27,1850
chr10	84957930	.	CCA	C	3137.13	PASS	AB=0.957;AC=29;AF=0.518;AN=56;BaseQRankSum=5.339;DP=948;FS=5.065;HRun=0;HaplotypeScore=153.8523;InbreedingCoeff=0.0463;MQ=57.97;MQ0=35;MQRankSum=-0.143;QD=4.59;ReadPosRankSum=0.103;VQSLOD=2.6235;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:4.93:0,5,72	1/1:9,0:8:1.40:16,1,0	0/1:51,2:24:22.70:23,0,41	0/0:59,0:19:3.01:0,3,38	0/0:21,0:19:36.10:0,36,526	0/0:33,1:35:28.26:0,28,794	1/1:41,5:45:18.99:197,19,0	0/1:34,2:29:48.26:194,0,48	0/1:34,3:36:23.78:24,0,949	0/1:30,0:24:14.11:14,0,81	1/1:18,0:18:8.07:42,8,0	0/1:21,1:21:33.52:34,0,348	0/0:33,2:36:4.95:0,5,866	0/1:24,1:25:9.55:10,0,436	1/1:23,0:23:9.63:61,10,0	0/1:24,0:21:30.44:30,0,85	0/1:22,0:22:16.51:57,0,17	0/0:26,1:28:5.91:0,6,629	1/1:19,2:18:2.12:184,2,0	1/1:28,18:46:80.89:868,81,0	1/1:42,21:61:83.41:828,83,0	1/1:23,8:27:30.21:280,30,0	0/1:32,3:35:78.47:78,0,544	0/1:36,2:40:7.03:7,0,894	0/0:23,0:21:5.86:0,6,59	0/1:41,3:41:64.72:65,0,840	1/1:18,7:28:29.75:300,30,0	0/0:17,1:16:2:0,2,417
chr10	84957957	.	CACACAT	C	2054.21	PASS	AB=0.977;AC=14;AF=0.250;AN=56;BaseQRankSum=1.527;DP=1253;FS=3.773;HRun=0;HaplotypeScore=238.9409;InbreedingCoeff=0.5698;MQ=41.63;MQ0=117;MQRankSum=-3.096;QD=6.50;ReadPosRankSum=-4.887;VQSLOD=1.6519;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:56,0:47:5.74:6,0,39	1/1:13,1:13:16.69:203,17,0	1/1:11,0:4:2.98:22,3,0	0/0:23,0:2:3.01:0,3,38	0/0:30,0:27:51.99:0,52,1132	0/0:33,0:33:65.41:0,65,1737	0/0:67,0:53:27.60:0,28,437	0/0:77,0:28:34.14:0,34,573	0/0:48,0:45:99:0,105,2424	0/1:65,1:41:99:476,0,111	1/1:22,4:23:17.93:234,18,0	0/0:34,0:26:50.71:0,51,909	0/0:39,0:39:86.63:0,87,2138	0/0:40,0:36:72.01:0,72,1522	1/1:37,4:34:23.71:375,24,0	0/1:32,3:26:99:397,0,127	1/1:29,2:28:39.61:503,40,0	0/0:37,0:37:74.23:0,74,1695	0/0:43,0:20:23.12:0,23,285	0/0:54,0:47:50.36:0,50,982	0/0:125,0:96:48.68:0,49,1430	0/0:43,0:32:24.63:0,25,325	0/0:44,0:42:64.91:0,65,1554	0/0:57,0:51:99:0,113,2403	0/1:36,0:24:14.83:15,0,16	0/0:87,0:65:48.30:0,48,2595	0/0:29,0:27:19.45:0,19,346	0/0:27,0:25:65.88:0,66,1317
chr10	84957961	.	CAT	C	2153.12	PASS	AB=0.981;AC=24;AF=0.429;AN=56;BaseQRankSum=10.347;DP=1262;FS=5.475;HRun=0;HaplotypeScore=189.6848;InbreedingCoeff=0.1350;MQ=40.54;MQ0=123;MQRankSum=4.346;QD=2.53;ReadPosRankSum=0.982;VQSLOD=2.4288;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:56,0:45:6.59:7,0,59	1/1:14,1:14:8.88:101,9,0	1/1:7,0:1:2.99:23,3,0	0/0:16,0:1:2.92:0,3,17	0/0:30,0:27:33.20:0,33,709	0/0:31,0:31:50.53:0,51,943	0/1:67,0:52:2.01:2,0,261	0/1:83,0:29:11.89:12,0,347	0/0:51,0:48:55.24:0,55,1323	0/1:72,2:46:70.34:355,0,70	1/1:25,2:23:17.97:175,18,0	0/1:32,1:25:0.29:0,0,501	0/0:37,0:37:54.35:0,54,1189	0/0:41,0:37:34.97:0,35,867	1/1:41,1:35:23.59:216,24,0	0/1:34,2:27:56.63:222,0,57	1/1:31,1:27:38.78:344,39,0	0/0:37,0:37:76.81:0,77,1087	0/1:43,0:20:51.64:52,0,101	0/1:50,3:46:29.64:255,0,30	0/1:123,3:96:99:312,0,399	0/1:43,1:34:49.56:133,0,50	0/1:43,1:42:21.43:21,0,805	0/0:54,0:48:89.99:0,90,1381	0/1:38,0:26:13.21:13,0,44	0/0:87,0:63:69.85:0,70,1459	1/1:29,0:26:14.27:91,14,0	0/0:28,0:26:53.91:0,54,819
chr10	84957975	.	CAT	C	46.38	PASS	AB=0.995;AC=6;AF=0.115;AN=52;BaseQRankSum=7.946;DP=1367;FS=24.828;HRun=0;HaplotypeScore=226.4495;InbreedingCoeff=0.2428;MQ=40.24;MQ0=149;MQRankSum=-1.947;QD=0.25;ReadPosRankSum=-3.579;VQSLOD=0.7284;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:52,1:42:14.54:20,0,15	0/1:13,0:12:17.95:18,0,102	./.	./.	0/0:31,0:28:52.52:0,53,880	0/0:31,0:30:51.19:0,51,1126	0/0:68,1:53:66.79:0,67,1168	0/0:116,0:34:75.09:0,75,1162	0/0:52,0:49:99:0,104,1719	0/0:94,0:58:13.96:0,14,1293	0/1:31,0:26:8.28:8,0,142	0/0:34,2:27:46.35:0,46,749	0/0:48,0:48:77.96:0,78,1687	0/0:45,0:38:52.63:0,53,1381	0/1:47,0:40:7.83:8,0,187	0/0:35,0:25:22.41:0,22,568	0/0:37,0:32:33.03:0,33,619	0/0:37,0:37:75.77:0,76,1391	0/0:52,0:19:39.99:0,40,688	0/0:56,0:50:74.79:0,75,1322	0/0:138,1:106:85.75:0,86,2469	0/0:49,0:40:32.56:0,33,501	0/0:42,0:40:35.23:0,35,1190	0/0:62,1:56:99:0,126,2113	1/1:25,14:27:9.05:109,9,0	0/0:92,0:67:99:0,136,2691	0/0:34,0:31:31.69:0,32,529	0/0:25,0:25:69.24:0,69,1325
chr10	84958047	.	T	TAC	5906.69	PASS	AB=0.934;AC=20;AF=0.357;AN=56;BaseQRankSum=1.749;DP=1376;FS=5.300;HRun=0;HaplotypeScore=183.1668;InbreedingCoeff=0.2559;MQ=44.32;MQ0=76;MQRankSum=-2.226;QD=7.14;ReadPosRankSum=5.372;VQSLOD=3.8146;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:31:16.93:106,0,17	1/1:14,0:13:8.61:59,9,0	0/0:12,0:2:2.92:0,3,17	0/0:16,0:6:2.96:0,3,122	0/0:33,0:32:78.26:0,78,1037	0/0:23,0:20:42.14:0,42,558	0/1:26,27:32:0.03:0,0,0	0/1:84,7:38:27.58:428,0,28	0/0:59,3:58:99:0,134,1762	0/1:102,2:83:99:560,0,514	0/1:19,0:19:44.90:45,0,59	0/0:47,0:40:90.24:0,90,1163	0/0:63,0:59:99:0,138,1805	0/0:52,0:50:99:0,132,1743	0/1:64,0:60:83.98:175,0,84	0/1:49,0:43:99:186,0,112	0/1:37,0:37:66.23:169,0,66	0/0:40,0:38:62.32:0,62,891	0/1:27,10:15:9.12:296,0,9	1/1:11,29:38:5.26:619,5,0	1/1:52,84:113:91.49:1562,91,0	1/1:14,34:44:48.16:831,48,0	0/0:30,0:30:75.25:0,75,995	0/0:60,0:55:99:0,100,1351	0/1:40,0:38:0.51:148,0,1	0/0:84,0:70:99:0,111,2176	1/1:14,25:34:42.14:724,42,0	0/0:26,0:26:50.77:0,51,859
chr10	84958133	.	CAT	C	1573.48	PASS	AB=0.901;AC=16;AF=0.286;AN=56;BaseQRankSum=6.258;DP=1535;FS=19.207;HRun=0;HaplotypeScore=186.7009;InbreedingCoeff=0.1403;MQ=35.82;MQ0=198;MQRankSum=1.099;QD=1.90;ReadPosRankSum=-4.670;VQSLOD=-0.0192;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:28:4.10:65,4,0	0/0:6,4:5:4.11:0,4,23	0/0:9,0:2:3:0,3,29	0/0:6,0:1:3.01:0,3,53	0/0:40,0:34:66.10:0,66,1097	0/0:31,0:27:42:0,42,1124	1/1:62,4:36:3:25,3,0	0/1:117,14:36:99:315,0,633	0/0:66,0:61:96.44:0,96,2270	0/1:102,6:69:99:369,0,2064	0/1:32,3:25:27.37:72,0,27	0/0:54,0:47:70.30:0,70,1581	0/0:59,0:54:99:0,108,1959	0/0:58,0:47:99:0,105,1908	1/1:56,10:52:32.74:438,33,0	0/1:61,6:52:99:152,0,108	0/0:35,2:29:47.86:0,48,737	0/0:51,0:46:99:0,107,2189	0/1:61,3:16:12.20:12,0,456	0/0:46,12:45:3.01:0,3,53	0/1:119,2:72:21.37:21,0,382	0/1:39,19:46:6.79:39,0,7	0/0:50,0:41:96.15:0,96,1634	0/0:70,0:60:99:0,111,2018	1/1:22,4:18:3.01:46,3,0	0/0:88,1:65:99:0,133,2999	0/1:37,10:34:85.21:179,0,85	0/0:21,0:21:43.17:0,43,1003
chr10	84958159	.	TATACACACAC	T	452.94	PASS	AB=0.961;AC=10;AF=0.200;AN=50;BaseQRankSum=6.345;DP=1291;FS=0.832;HRun=0;HaplotypeScore=235.5883;InbreedingCoeff=0.1184;MQ=35.33;MQ0=154;MQRankSum=-7.131;QD=1.08;ReadPosRankSum=-3.642;VQSLOD=2.2097;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:24:2.29:0,2,6	0/1:9,0:5:0.01:0,0,0	./.	./.	0/0:31,0:30:38.48:0,38,1425	0/0:28,0:25:36.12:0,36,1232	0/0:47,0:21:1.72:0,2,4	0/1:97,0:35:31.44:197,0,31	0/0:54,0:46:68.49:0,68,2358	0/1:89,0:54:99:213,0,467	0/0:36,0:26:2.61:0,3,50	0/0:57,0:47:57.64:0,58,2018	0/0:58,0:50:72.25:0,72,2670	0/0:65,0:53:78.27:0,78,2949	0/0:47,0:32:0:0,0,0	1/1:50,0:38:1.30:3,1,0	0/1:31,0:24:50:50,0,87	0/0:43,0:42:42.53:0,43,2176	0/0:36,2:12:3.01:0,3,72	0/1:46,6:39:39.10:39,0,65	0/0:90,0:49:18.06:0,18,534	1/1:42,10:39:0.47:1,0,0	0/0:44,0:38:57.19:0,57,2129	0/0:58,0:51:63.22:0,63,2358	./.	0/0:79,0:64:99:0,126,4003	0/1:31,5:27:25.69:61,0,26	0/0:21,0:21:33.11:0,33,1148
chr10	84958171	.	TAC	T	528.01	PASS	AB=0.794;AC=6;AF=0.107;AN=56;BaseQRankSum=7.012;DP=1326;FS=0.767;HRun=0;HaplotypeScore=172.4709;InbreedingCoeff=0.1512;MQ=36.54;MQ0=151;MQRankSum=-7.677;QD=2.20;ReadPosRankSum=1.104;VQSLOD=2.4528;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,9:28:0.06:1,0,0	0/1:5,3:5:0.03:0,0,0	0/0:8,0:3:2.99:0,3,24	0/0:7,0:1:3.01:0,3,33	0/0:32,0:30:56.78:0,57,958	0/0:31,2:29:67.18:0,67,1054	0/0:41,1:21:11.70:0,12,113	0/0:100,1:38:45.09:0,45,558	0/0:55,1:48:96.18:0,96,1526	0/1:64,15:49:99:480,0,468	0/0:20,14:26:3.48:0,3,53	0/0:55,0:45:78.24:0,78,1282	0/0:60,0:51:93.26:0,93,1536	0/0:65,0:53:99:0,99,1638	0/1:21,20:28:0.09:0,0,0	0/0:40,11:40:3.01:0,3,31	0/1:26,8:26:99:111,0,135	0/0:47,0:46:67.54:0,68,1470	0/0:40,3:12:24.05:0,24,318	0/0:50,3:41:23.64:0,24,298	0/0:96,1:58:36.58:0,37,559	0/0:56,1:45:9.03:0,9,143	0/0:47,1:43:99:0,99,1619	0/0:57,0:50:77.94:0,78,1321	0/0:22,10:26:11.98:0,12,148	0/0:80,1:67:99:0,164,2498	0/1:36,4:29:34.55:35,0,178	0/0:26,0:25:63.21:0,63,1007
chr10	84958173	.	C	CAT	170.68	PASS	AB=0.965;AC=9;AF=0.161;AN=56;BaseQRankSum=7.219;DP=1334;FS=8.950;HRun=0;HaplotypeScore=178.8406;InbreedingCoeff=0.0937;MQ=36.42;MQ0=154;MQRankSum=-7.451;QD=0.50;ReadPosRankSum=-0.600;VQSLOD=1.9751;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,4:28:1.39:3,1,0	1/1:8,0:5:0.57:1,1,0	0/0:11,0:3:2.90:0,3,16	0/0:9,0:1:3.01:0,3,32	0/0:31,0:30:63.18:0,63,918	0/0:32,2:30:74.22:0,74,1014	0/0:39,1:18:12.02:0,12,157	0/0:100,0:37:73.70:0,74,732	0/0:50,4:46:38.36:0,38,1318	0/1:78,2:51:38.55:39,0,902	0/0:34,0:26:2.40:0,2,45	0/0:55,0:45:84.21:0,84,1196	0/0:61,0:52:99:0,108,1491	0/0:61,1:50:99:0,104,1514	0/1:40,1:29:0.11:0,0,0	0/0:50,1:40:1.66:0,2,42	0/0:34,2:28:1.33:0,1,233	0/1:43,3:45:41.76:42,0,1436	0/0:43,1:14:32.89:0,33,362	0/0:55,0:42:24.02:0,24,266	0/0:93,7:61:37.10:0,37,443	0/0:57,0:45:8.04:0,8,129	0/0:49,0:44:99:0,102,1512	0/0:56,0:49:80.91:0,81,1214	0/0:29,1:24:11.91:0,12,135	0/1:79,6:69:99:167,0,2079	0/1:40,0:29:28.04:28,0,177	0/0:26,0:25:64.22:0,64,974
chr10	84958177	.	C	CAT	62.73	PASS	AB=0.994;AC=4;AF=0.071;AN=56;BaseQRankSum=7.414;DP=1323;FS=2.576;HRun=0;HaplotypeScore=183.4454;InbreedingCoeff=0.2194;MQ=36.51;MQ0=154;MQRankSum=-8.234;QD=0.41;ReadPosRankSum=-1.166;VQSLOD=2.5926;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:29:1.39:3,1,0	0/0:8,0:6:0.47:0,0,1	0/0:14,0:2:5.95:0,6,43	0/0:14,0:1:3.01:0,3,35	0/0:29,0:27:57.19:0,57,870	0/0:34,0:30:70.41:0,70,987	0/0:37,0:17:12:0,12,155	0/0:92,1:38:81.80:0,82,769	0/0:53,0:45:73.80:0,74,1317	0/1:78,1:53:99:117,0,531	0/0:35,0:28:2.37:0,2,44	0/0:52,3:45:84.22:0,84,1197	0/0:57,4:52:99:0,108,1502	0/0:58,1:47:99:0,99,1468	0/0:43,0:32:0.73:0,1,2	0/0:46,2:38:1.64:0,2,43	0/1:36,0:28:32.24:32,0,153	0/0:46,0:44:59.05:0,59,1469	0/0:44,0:14:22.82:0,23,319	0/0:57,0:44:29.96:0,30,305	0/0:98,0:62:45.73:0,46,507	0/0:55,0:43:11.14:0,11,159	0/0:51,0:46:99:0,108,1556	0/0:57,0:49:80.87:0,81,1209	0/0:30,0:24:11.91:0,12,139	0/0:78,0:63:57.75:0,58,2094	0/0:40,0:29:34.89:0,35,283	0/0:26,0:25:63.21:0,63,950
chr10	84958181	.	TAC	T	113.66	PASS	AB=0.974;AC=9;AF=0.161;AN=56;BaseQRankSum=8.047;DP=1332;FS=11.160;HRun=0;HaplotypeScore=187.6730;InbreedingCoeff=0.2248;MQ=36.82;MQ0=150;MQRankSum=-7.248;QD=0.29;ReadPosRankSum=-0.981;VQSLOD=1.9646;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:31:0.06:1,0,0	0/1:8,0:6:0.21:0,0,0	0/0:12,0:1:3.01:0,3,41	0/0:15,0:1:3.01:0,3,52	0/0:31,0:29:56.77:0,57,948	0/0:34,0:30:53.93:0,54,926	0/0:36,0:17:8.82:0,9,110	0/1:92,6:41:82.49:82,0,716	0/0:53,0:45:79.92:0,80,1479	0/1:76,1:52:99:117,0,448	0/1:34,1:29:0.42:0,0,47	0/0:53,0:43:72.22:0,72,1194	0/0:59,0:50:99:0,105,1720	0/0:62,0:50:99:0,102,1726	0/1:45,1:36:0.62:2,0,1	1/1:48,0:39:0.35:1,0,0	0/1:37,0:30:0.69:1,0,109	0/0:47,0:44:35.53:0,36,1372	0/0:42,0:15:25.31:0,25,354	0/0:53,5:46:43.96:0,44,657	0/0:98,3:63:51.28:0,51,818	0/0:51,3:43:21.04:0,21,300	0/0:49,0:44:90.31:0,90,1512	0/0:56,0:48:74.93:0,75,1259	0/0:30,0:24:4.36:0,4,11	0/0:77,0:61:99:0,140,2571	0/0:39,2:30:35.08:0,35,464	0/0:26,0:25:48.16:0,48,824
chr10	84958185	.	CACACAT	C	1672.57	PASS	AB=0.856;AC=11;AF=0.196;AN=56;BaseQRankSum=10.084;DP=1322;FS=2.603;HRun=0;HaplotypeScore=224.1204;InbreedingCoeff=0.2801;MQ=37.08;MQ0=142;MQRankSum=-8.601;QD=4.21;ReadPosRankSum=-2.782;VQSLOD=1.9441;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:39,2:32:0.83:3,1,0	0/1:4,3:5:0.04:0,0,0	0/0:13,0:1:3.01:0,3,51	0/0:17,0:1:3.01:0,3,60	0/0:33,0:30:62.92:0,63,1709	0/0:29,0:25:54.17:0,54,1483	0/0:36,0:19:5.19:0,5,94	0/1:100,0:44:53.12:53,0,941	0/0:52,0:43:72.88:0,73,2464	0/1:71,13:57:99:1250,0,332	0/1:23,10:28:28.75:95,0,29	0/0:51,0:41:69.69:0,70,2121	0/0:60,0:51:99:0,111,3025	0/0:62,0:51:99:0,108,3151	1/1:34,15:39:2.80:49,3,0	1/1:38,7:39:6.05:99,6,0	0/1:34,2:28:38.09:254,0,38	0/0:45,0:42:85.06:0,85,2265	0/0:39,0:14:28.85:0,29,386	0/0:55,0:45:48:0,48,744	0/0:106,0:67:59.90:0,60,1139	0/0:52,0:41:27.56:0,28,422	0/0:45,0:40:93.14:0,93,2686	0/0:57,0:49:78.27:0,78,2239	0/0:30,0:24:11.21:0,11,109	0/0:78,0:60:71.14:0,71,3876	0/0:41,0:31:26.92:0,27,621	0/0:21,0:20:48.16:0,48,1426
chr10	84958187	.	C	CAT	785.72	PASS	AB=0.960;AC=11;AF=0.196;AN=56;BaseQRankSum=8.733;DP=1319;FS=10.915;HRun=0;HaplotypeScore=193.0166;InbreedingCoeff=0.2792;MQ=37.49;MQ0=139;MQRankSum=-5.915;QD=1.89;ReadPosRankSum=-5.017;VQSLOD=-0.2865;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:41,1:32:1.26:3,1,0	0/0:6,1:5:0:0,0,0	0/0:15,0:2:3.01:0,3,46	0/0:17,0:1:3.01:0,3,46	0/0:33,0:31:66.16:0,66,919	0/0:28,0:24:53.84:0,54,822	0/0:40,1:22:14.56:0,15,141	0/1:94,1:44:99:150,0,718	0/0:49,0:42:61.83:0,62,1263	0/1:78,5:58:99:461,0,378	0/1:30,2:27:36.78:47,0,37	0/0:52,0:42:75.15:0,75,1096	0/0:61,0:52:99:0,111,1634	0/0:61,0:51:99:0,108,1587	1/1:43,6:40:1.54:22,2,0	0/1:43,1:38:1.98:62,0,2	0/1:33,2:27:38.91:160,0,39	0/0:43,1:41:60.57:0,61,1295	0/0:39,0:15:27.37:0,27,311	0/0:53,1:44:48.10:0,48,659	0/0:103,2:68:63.10:0,63,848	0/0:48,1:38:29.97:0,30,342	0/0:45,0:40:93.30:0,93,1397	0/0:56,0:48:77.90:0,78,1168	1/1:31,0:25:5.26:14,5,0	0/0:84,0:64:99:0,149,2199	0/0:40,0:31:34.81:0,35,544	0/0:23,0:22:48.16:0,48,730
chr10	84958191	.	TACAC	T	324.09	PASS	AB=0.993;AC=8;AF=0.143;AN=56;BaseQRankSum=10.045;DP=1304;FS=1.281;HRun=0;HaplotypeScore=209.0069;InbreedingCoeff=0.2689;MQ=38.33;MQ0=135;MQRankSum=-7.092;QD=1.31;ReadPosRankSum=0.233;VQSLOD=2.8385;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:31:0.16:0,0,0	0/1:8,0:6:0:0,0,0	0/0:16,0:2:6.02:0,6,122	0/0:20,0:4:10.71:0,11,121	0/0:32,0:31:65.88:0,66,1539	0/0:25,1:22:50.80:0,51,1227	0/0:40,0:21:11:0,11,241	0/0:89,0:38:15.55:0,16,1443	0/0:49,0:45:74.70:0,75,2038	0/1:78,0:56:99:358,0,365	0/1:31,0:26:11.77:12,0,36	0/0:53,0:43:81.68:0,82,1848	0/0:63,0:54:99:0,117,2682	0/0:63,0:53:99:0,114,2572	1/1:53,0:44:0.13:3,0,0	1/1:41,1:35:1.61:8,2,0	0/1:33,1:27:47.68:48,0,186	0/0:43,1:41:28.88:0,29,1826	0/0:41,0:16:38.69:0,39,591	0/0:51,0:40:51.16:0,51,1096	0/0:97,4:66:73.52:0,74,1402	0/0:43,1:33:4.32:0,4,723	0/0:44,1:41:93.25:0,93,2224	0/0:55,0:47:78.19:0,78,1756	0/0:31,0:26:11.29:0,11,181	0/0:86,0:65:99:0,161,3240	0/0:36,0:31:8.12:0,8,848	0/0:24,0:23:57.16:0,57,1231
chr10	84958215	.	T	TAC	117.28	PASS	AB=0.983;AC=12;AF=0.214;AN=56;BaseQRankSum=11.919;DP=1237;FS=37.833;HRun=0;HaplotypeScore=196.2378;InbreedingCoeff=0.5082;MQ=42.31;MQ0=83;MQRankSum=-3.577;QD=0.35;ReadPosRankSum=1.096;VQSLOD=1.5689;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:45,0:37:7.12:28,7,0	0/0:7,0:7:2.23:0,2,6	0/0:25,0:5:15.05:0,15,228	0/0:31,0:6:18.06:0,18,262	0/0:30,0:28:72.24:0,72,1100	0/0:24,0:22:54.56:0,55,823	0/0:39,0:28:14.51:0,15,330	0/0:92,0:46:99:0,108,1564	0/0:47,0:41:92.57:0,93,1459	0/1:73,0:59:63.71:64,0,273	1/1:24,0:22:3.74:9,4,0	0/0:49,0:43:87.28:0,87,1306	0/0:59,1:53:99:0,110,1835	0/0:52,0:45:99:0,99,1508	0/1:55,0:48:1.04:1,0,2	1/1:37,1:36:8.84:37,9,0	0/1:34,1:31:98.12:98,0,104	0/1:35,1:33:11.58:12,0,948	0/0:34,0:16:39.09:0,39,561	0/0:46,0:42:75.14:0,75,1090	0/0:106,0:77:99:0,99,1677	0/0:42,0:35:57.19:0,57,848	0/0:40,0:39:99:0,105,1541	0/0:37,0:35:69.16:0,69,1014	1/1:30,0:26:5.43:12,5,0	0/0:72,0:56:90:0,90,1872	0/0:39,0:34:62.96:0,63,958	0/0:26,0:25:60.13:0,60,818
chr10	84958217	.	T	TAC	3535.09	PASS	AB=0.720;AC=14;AF=0.250;AN=56;BaseQRankSum=5.455;DP=1251;FS=27.554;HRun=0;HaplotypeScore=184.7390;InbreedingCoeff=0.7648;MQ=42.29;MQ0=89;MQRankSum=-2.112;QD=11.15;ReadPosRankSum=-0.957;VQSLOD=1.8361;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,22:39:8.60:110,9,0	1/1:2,5:7:7.28:142,7,0	0/0:25,0:5:12.04:0,12,156	0/0:31,0:6:15.05:0,15,193	0/0:30,0:28:72.21:0,72,918	0/0:25,0:23:48.53:0,49,624	0/0:38,0:28:25.56:0,26,308	0/0:97,0:47:78.20:0,78,950	0/0:47,0:40:86.74:0,87,1140	0/1:53,22:60:40.76:1456,0,41	1/1:15,10:23:14.97:229,15,0	0/0:46,0:40:87.25:0,87,1097	0/0:58,1:52:69.68:0,70,1451	0/0:50,1:45:87.26:0,87,1113	1/1:27,29:48:35.01:597,35,0	1/1:20,21:39:14.32:255,14,0	0/1:18,17:32:85.21:237,0,85	0/0:37,0:34:32.98:0,33,752	0/0:37,0:16:30.10:0,30,390	0/0:46,0:42:69.22:0,69,891	0/0:104,0:77:99:0,111,1440	0/0:40,2:35:60.17:0,60,753	0/0:40,0:39:93.05:0,93,1137	0/0:37,0:35:56.54:0,57,695	1/1:14,16:26:30.10:510,30,0	0/0:69,1:55:99:0,107,1533	0/0:39,0:34:62.95:0,63,817	0/0:26,0:25:58.27:0,58,720
chr10	84958807	.	AT	A	3878.01	PASS	AB=0.728;AC=12;AF=0.214;AN=56;BaseQRankSum=8.319;DP=545;FS=0.000;HRun=2;HaplotypeScore=56.4721;InbreedingCoeff=0.7597;MQ=92.94;MQ0=0;MQRankSum=-0.623;QD=28.94;ReadPosRankSum=3.392;VQSLOD=3.2064;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,99,1456	1/1:0,4:4:9.03:117,9,0	0/0:25,0:25:72.22:0,72,1057	0/0:27,0:27:47.33:0,47,1064	0/0:17,0:17:48.16:0,48,719	0/0:21,0:20:57.15:0,57,823	0/0:30,0:30:90.29:0,90,1329	0/0:21,0:21:60.20:0,60,881	0/0:23,0:23:66.22:0,66,975	1/1:0,20:20:60.17:752,60,0	1/1:0,14:14:42.14:545,42,0	0/0:18,0:18:47.93:0,48,672	0/0:11,0:11:33.11:0,33,494	0/0:14,0:14:42.13:0,42,607	1/1:1,22:23:63.20:817,63,0	0/1:2,13:15:50.73:389,0,51	1/1:0,35:35:96.31:1246,96,0	0/0:22,0:22:63.21:0,63,944	0/0:26,0:26:75.25:0,75,1123	0/0:13,0:13:36.11:0,36,521	0/0:22,0:22:66.22:0,66,987	0/0:3,0:3:9.03:0,9,134	0/0:4,0:4:9.03:0,9,135	0/0:31,0:31:93.31:0,93,1390	0/0:10,0:10:30.10:0,30,450	0/1:21,2:23:11.71:12,0,833	0/0:23,0:23:63.21:0,63,941	0/0:12,0:12:36.12:0,36,538
chr10	84959032	.	T	TAA	2875.68	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=0.228;DP=393;FS=6.932;HRun=9;HaplotypeScore=49.2266;InbreedingCoeff=0.8826;MQ=66.05;MQ0=8;MQRankSum=0.221;QD=21.14;ReadPosRankSum=2.001;VQSLOD=1.8782;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:25:37.65:141,38,0	1/1:0,6:7:18.06:277,18,0	0/0:14,0:10:11.79:0,12,176	0/0:10,0:6:10.94:0,11,92	0/0:21,0:20:50.94:0,51,543	0/0:14,0:14:36.09:0,36,383	0/0:9,0:9:21.05:0,21,222	0/0:22,0:21:51.04:0,51,533	0/0:9,0:9:18.03:0,18,190	1/1:4,14:18:45.09:631,45,0	1/1:1,16:17:45.15:693,45,0	0/0:6,0:6:8.98:0,9,88	0/0:8,0:8:21.05:0,21,224	0/0:10,0:10:24.06:0,24,255	1/1:3,11:15:36.12:537,36,0	1/1:1,5:7:15.05:231,15,0	1/1:6,11:15:26.58:378,27,0	0/0:26,0:26:62.33:0,62,652	0/0:17,0:16:39.06:0,39,397	0/0:17,0:17:42.10:0,42,447	0/0:9,0:9:24.06:0,24,255	0/0:6,0:6:15.04:0,15,160	0/0:3,0:3:9.02:0,9,96	0/1:3,0:3:10.92:11,0,55	1/1:1,1:24:42.94:183,43,0	0/0:24,0:24:69.15:0,69,721	0/0:16,0:16:36.08:0,36,383	0/0:16,0:15:39.08:0,39,415
chr10	84962442	.	A	AAC	1089.62	PASS	AB=0.757;AC=10;AF=0.179;AN=56;BaseQRankSum=5.130;DP=753;FS=2.353;HRun=0;HaplotypeScore=112.7490;InbreedingCoeff=0.7481;MQ=53.76;MQ0=28;MQRankSum=-1.708;QD=12.97;ReadPosRankSum=1.563;VQSLOD=3.7853;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:40:59.51:0,60,641	1/1:1,5:6:15.05:232,15,0	0/0:48,0:19:30.82:0,31,368	0/0:52,0:17:31.63:0,32,350	0/0:26,0:26:66.14:0,66,767	0/0:24,0:24:49.66:0,50,708	0/0:37,0:34:54.53:0,55,632	0/0:43,0:35:78.20:0,78,927	0/0:26,0:26:57.17:0,57,718	0/1:10,2:10:12.43:112,0,12	1/1:16,6:22:18.75:257,19,0	0/0:19,0:19:51.16:0,51,638	0/0:12,0:12:30.10:0,30,375	0/0:17,0:16:33.09:0,33,402	1/1:10,4:12:19.95:294,20,0	1/1:6,3:9:15.51:212,16,0	0/1:10,11:21:66.46:149,0,66	0/0:32,0:32:77.30:0,77,864	0/0:16,0:11:21.07:0,21,264	0/0:30,0:29:81.19:0,81,977	0/0:62,0:60:99:0,141,1664	0/0:25,0:25:63.20:0,63,794	0/0:26,0:26:66.20:0,66,816	0/0:58,0:56:99:0,134,1683	0/0:15,0:14:15.05:0,15,189	0/0:29,0:28:72.20:0,72,871	0/0:21,0:20:45.05:0,45,522	0/0:8,0:8:24.06:0,24,286
chr10	84962453	.	ACT	A	406.04	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=5.093;DP=742;FS=2.664;HRun=0;HaplotypeScore=114.1025;InbreedingCoeff=0.4905;MQ=51.79;MQ0=36;MQRankSum=-4.606;QD=4.02;ReadPosRankSum=-2.774;VQSLOD=2.3607;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:32:44.92:171,0,45	0/1:6,0:6:8.81:9,0,11	0/0:52,0:16:23.49:0,23,380	0/0:55,0:12:16.98:0,17,360	0/0:26,0:26:75.15:0,75,1178	0/0:20,1:21:21:0,21,1009	0/0:34,0:30:57.27:0,57,921	0/0:49,0:37:84:0,84,1457	0/0:22,1:23:57.15:0,57,1015	0/1:9,0:8:8.47:67,0,8	1/1:14,0:14:15.54:104,16,0	0/0:20,0:18:40.35:0,40,856	0/0:13,0:13:18.10:0,18,532	0/0:13,0:12:33.10:0,33,594	1/1:10,1:9:4.45:55,4,0	1/1:7,1:8:12.18:120,12,0	0/1:17,0:17:31.83:32,0,63	0/0:33,0:35:80.77:0,81,1499	0/0:20,0:12:30.07:0,30,476	0/0:34,0:33:99:0,99,1615	0/0:60,0:59:99:0,153,2421	0/0:26,0:26:75.16:0,75,1280	0/0:28,0:28:80.54:0,81,1365	0/0:59,0:57:95.73:0,96,2516	0/0:14,0:13:15.05:0,15,244	0/0:30,0:30:88.02:0,88,1377	0/0:21,0:21:54:0,54,748	0/0:8,0:8:23.99:0,24,355
chr10	84962455	.	TCA	T	463.35	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.945;DP=733;FS=4.290;HRun=0;HaplotypeScore=115.8523;InbreedingCoeff=0.8307;MQ=51.61;MQ0=39;MQRankSum=-2.014;QD=12.87;ReadPosRankSum=-2.231;VQSLOD=3.1038;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,11:32:50.13:558,50,0	0/0:6,0:6:15.43:0,15,122	0/0:52,0:15:17.04:0,17,213	0/0:54,0:11:18.53:0,19,263	0/0:24,0:24:60.10:0,60,964	0/0:21,0:21:36.89:0,37,876	0/0:33,0:28:45.62:0,46,731	0/0:46,0:34:81.23:0,81,1217	0/0:24,0:23:54.15:0,54,849	0/0:8,0:8:12.75:0,13,108	0/0:14,0:14:19.68:0,20,108	0/0:19,1:18:9.57:0,10,701	0/0:13,0:13:30.57:0,31,481	0/0:14,0:13:33.10:0,33,517	0/0:10,0:8:17.18:0,17,130	0/0:8,0:8:10.58:0,11,66	0/0:18,0:17:29.49:0,29,263	0/0:34,0:35:95.18:0,95,1486	0/0:20,0:12:27.09:0,27,443	0/0:32,0:31:90.30:0,90,1433	0/0:58,0:57:99:0,134,2060	0/0:28,0:28:78.25:0,78,1224	0/0:27,0:27:80.94:0,81,1251	0/0:58,0:56:99:0,114,2201	0/0:14,0:13:14.95:0,15,136	0/0:30,0:30:77.33:0,77,1219	0/0:22,0:22:42.10:0,42,623	0/0:7,0:7:15.05:0,15,253
chr10	84962468	.	AACAC	A	73.26	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.365;DP=715;FS=3.125;HRun=0;HaplotypeScore=144.7008;InbreedingCoeff=0.7130;MQ=48.28;MQ0=48;MQRankSum=-2.251;QD=5.64;ReadPosRankSum=0.226;VQSLOD=2.5668;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:32:22.61:0,23,224	0/0:6,0:6:18.03:0,18,177	0/0:30,0:5:6.02:0,6,99	0/0:38,0:7:8.99:0,9,107	0/0:26,0:25:64.76:0,65,1428	0/0:21,0:21:53.89:0,54,957	0/0:29,0:23:23.96:0,24,232	0/0:45,0:32:49.75:0,50,499	0/0:28,0:25:51.16:0,51,1091	0/0:11,0:8:17.22:0,17,216	0/0:10,0:10:22.52:0,23,168	0/0:23,0:21:48.14:0,48,964	0/0:12,0:12:21.03:0,21,363	0/0:15,0:14:36.01:0,36,738	0/0:10,0:7:14.98:0,15,155	0/0:4,0:4:8.71:0,9,86	0/0:15,0:14:20.60:0,21,180	0/0:39,0:38:96.09:0,96,2117	0/0:22,0:13:26.29:0,26,195	0/0:37,0:36:86.24:0,86,674	0/0:62,0:59:77.98:0,78,751	0/0:33,0:32:59.45:0,59,445	0/0:32,0:31:78.10:0,78,1644	0/0:61,0:59:99:0,135,2772	1/1:2,11:13:9.03:156,9,0	0/0:30,0:29:77.52:0,78,1626	0/0:18,0:16:29.70:0,30,221	0/0:5,0:5:15.05:0,15,376
chr10	84962484	.	AAC	A	4292.85	PASS	AB=1.000;AC=18;AF=0.333;AN=54;BaseQRankSum=10.919;DP=688;FS=2.854;HRun=0;HaplotypeScore=110.3100;InbreedingCoeff=0.8455;MQ=47.11;MQ0=51;MQRankSum=-2.749;QD=15.28;ReadPosRankSum=-2.018;VQSLOD=4.6310;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:23,10:27:35.79:312,36,0	0/1:6,0:6:0:0,0,0	./.	0/0:31,0:1:3.01:0,3,39	0/0:26,1:26:70.77:0,71,1057	0/0:22,0:21:21.31:0,21,460	1/1:19,13:26:23.84:194,24,0	1/1:31,12:32:21:582,21,0	0/0:29,0:25:50.53:0,51,759	0/0:10,0:6:6:0,6,59	0/0:9,0:9:7.59:0,8,40	0/0:24,0:20:48.16:0,48,765	0/0:11,0:11:27.02:0,27,381	0/0:14,0:14:33.11:0,33,523	0/1:8,0:5:0:0,0,0	0/0:2,0:2:0:0,0,0	0/0:10,0:9:6.37:0,6,43	0/0:46,1:46:23.20:0,23,1352	1/1:11,10:14:26.37:290,26,0	1/1:20,17:36:93.15:1083,93,0	1/1:36,14:46:18.28:797,18,0	1/1:4,26:28:65.89:714,66,0	0/0:29,1:29:34.71:0,35,1054	0/0:57,0:55:99:0,120,1933	0/0:16,0:15:20.99:0,21,242	0/0:31,0:29:67.91:0,68,969	1/1:3,18:19:27.04:320,27,0	0/0:11,0:11:24.95:0,25,384
chr10	84962548	.	AAC	A	1186.09	PASS	AB=0.971;AC=13;AF=0.232;AN=56;BaseQRankSum=9.407;DP=661;FS=8.284;HRun=0;HaplotypeScore=104.6168;InbreedingCoeff=0.7934;MQ=54.38;MQ0=35;MQRankSum=-2.667;QD=11.52;ReadPosRankSum=-0.723;VQSLOD=2.7904;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:32,1:29:29.12:77,0,29	1/1:0,1:1:3.01:32,3,0	0/0:32,0:7:6.27:0,6,161	0/0:37,0:6:5.44:0,5,40	0/0:26,0:25:63.17:0,63,968	0/0:23,1:23:23.26:0,23,864	0/0:33,0:32:54:0,54,797	0/0:44,0:32:24.31:0,24,793	0/0:29,0:26:46.62:0,47,949	1/1:3,12:13:39.05:442,39,0	1/1:3,11:14:29.93:288,30,0	0/0:11,0:9:15.05:0,15,242	0/0:10,0:10:24.08:0,24,387	0/0:13,0:13:27.09:0,27,434	1/1:3,11:12:18.01:199,18,0	1/1:0,14:12:17.61:185,18,0	1/1:2,10:11:12.04:143,12,0	0/0:43,0:42:93.26:0,93,1451	0/0:32,0:24:45.62:0,46,686	0/0:38,0:36:93.19:0,93,1409	0/0:39,1:39:65.26:0,65,992	0/0:26,0:24:54.11:0,54,807	0/0:16,1:17:8.20:0,8,608	0/0:36,0:33:65.56:0,66,986	0/0:18,1:16:11.23:0,11,696	0/0:18,0:16:36.12:0,36,581	0/0:21,0:20:36.12:0,36,557	0/0:9,0:9:24.08:0,24,391
chr10	84962562	.	CACAA	C	600.06	PASS	AB=0.973;AC=3;AF=0.054;AN=56;BaseQRankSum=3.844;DP=631;FS=5.641;HRun=0;HaplotypeScore=126.8054;InbreedingCoeff=0.5206;MQ=66.53;MQ0=16;MQRankSum=0.032;QD=9.84;ReadPosRankSum=-1.230;VQSLOD=2.1777;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,11:23:8.30:678,8,0	0/0:2,0:2:6:0,6,52	0/0:30,0:13:9.13:0,9,389	0/1:34,0:17:16.99:17,0,201	0/0:28,0:27:78.02:0,78,1713	0/0:26,0:26:72.18:0,72,1630	0/0:28,0:27:63.10:0,63,1151	0/0:37,0:29:52.30:0,52,1347	0/0:27,0:26:67.44:0,67,1576	0/0:16,0:15:36.56:0,37,316	0/0:15,0:15:35.89:0,36,306	0/0:10,0:8:21.05:0,21,421	0/0:13,0:13:33.07:0,33,659	0/0:11,0:11:33.06:0,33,768	0/0:16,0:14:23.89:0,24,192	0/0:18,0:16:29.86:0,30,259	0/0:15,0:15:23.91:0,24,194	0/0:37,0:37:84.33:0,84,2335	0/0:27,0:23:60.98:0,61,1184	0/0:38,0:38:99:0,101,2253	0/0:32,0:32:71.67:0,72,1504	0/0:23,0:23:54.05:0,54,1213	0/0:17,0:17:51.10:0,51,1115	0/0:33,0:30:75.16:0,75,1599	0/0:21,0:20:59.37:0,59,1364	0/0:20,0:18:51.14:0,51,1098	0/0:18,0:18:39.13:0,39,971	0/0:11,0:11:33.10:0,33,771
chr10	84962592	.	TA	T	2693.59	PASS	AB=0.922;AC=16;AF=0.286;AN=56;BaseQRankSum=6.557;DP=592;FS=3.401;HRun=10;HaplotypeScore=83.3235;InbreedingCoeff=0.8075;MQ=77.78;MQ0=2;MQRankSum=0.621;QD=13.54;ReadPosRankSum=-0.510;VQSLOD=3.7695;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:56.92:0,57,595	0/0:8,0:8:24.06:0,24,264	0/0:30,0:23:33.93:0,34,357	0/1:32,2:28:18.59:19,0,233	0/0:30,3:33:6.06:0,6,742	0/0:24,0:24:57.09:0,57,606	1/1:4,17:19:13.22:241,13,0	1/1:7,21:28:62.82:529,63,0	0/0:18,1:19:25.09:0,25,505	0/0:28,0:29:72:0,72,752	0/0:19,1:21:21.82:0,22,419	0/0:9,0:8:24.06:0,24,259	0/0:10,0:10:27.07:0,27,299	0/0:14,0:14:33.08:0,33,357	0/1:11,1:12:11.01:11,0,118	0/0:26,0:24:45.07:0,45,476	0/0:24,0:24:45.12:0,45,498	0/0:30,0:30:81.69:0,82,896	1/1:4,10:13:29.77:244,30,0	1/1:5,29:34:64.59:714,65,0	1/1:3,12:15:32.99:286,33,0	1/1:4,15:19:44.89:381,45,0	0/0:19,0:19:48.13:0,48,531	0/0:16,0:16:39.09:0,39,422	0/0:21,0:21:55.01:0,55,584	0/0:27,0:27:69.19:0,69,763	1/1:2,19:21:53.98:469,54,0	0/0:10,0:10:15.04:0,15,166
chr10	84962867	.	TAAAG	T	599.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.718;DP=651;FS=0.000;HRun=0;HaplotypeScore=119.6467;InbreedingCoeff=0.9947;MQ=62.77;MQ0=2;MQRankSum=2.026;QD=33.31;ReadPosRankSum=2.923;VQSLOD=3.7997;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,102,2373	0/0:9,0:9:21.03:0,21,482	0/0:27,0:16:32.47:0,32,537	0/0:26,0:18:29.37:0,29,558	0/0:25,0:25:72.23:0,72,1735	0/0:18,0:18:54.10:0,54,1252	0/0:23,0:23:45.15:0,45,1036	0/0:25,0:25:60.19:0,60,1367	0/0:19,0:19:54.17:0,54,1283	0/0:36,0:36:99:0,105,2576	0/0:17,0:17:45.15:0,45,1067	0/0:15,0:15:42.14:0,42,1082	0/0:18,0:18:51.18:0,51,1291	0/0:25,0:25:69.20:0,69,1533	0/0:24,0:24:63.19:0,63,1370	0/0:25,0:25:66.20:0,66,1594	0/0:33,0:33:87.03:0,87,2128	0/0:24,0:24:63.16:0,63,1499	0/0:21,0:21:54.17:0,54,1156	0/0:27,0:27:72.24:0,72,1714	0/0:20,0:20:39.10:0,39,850	0/0:20,0:20:45.15:0,45,1087	0/0:13,0:13:36.12:0,36,904	0/0:33,0:33:99:0,99,2342	1/1:1,17:18:39.13:694,39,0	0/0:31,0:31:78.25:0,78,1847	0/0:20,0:19:54.17:0,54,1124	0/0:18,0:18:53.63:0,54,1154
chr10	84962899	.	AGAAG	A	4634.72	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=12.737;DP=685;FS=39.822;HRun=0;HaplotypeScore=111.8164;InbreedingCoeff=0.9375;MQ=59.53;MQ0=8;MQRankSum=1.255;QD=25.75;ReadPosRankSum=-0.070;VQSLOD=2.6334;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,123,2900	0/0:8,0:8:24.08:0,24,580	0/1:20,0:10:3.02:3,0,281	0/0:29,0:16:29.97:0,30,394	0/0:31,0:31:90.30:0,90,2133	0/0:22,0:22:60.20:0,60,1386	1/1:4,17:21:25.84:391,26,0	1/1:5,21:25:54.04:752,54,0	0/0:22,0:22:63.22:0,63,1550	0/0:36,0:36:99:0,99,2249	0/0:19,0:19:54.18:0,54,1189	0/0:18,0:18:54.17:0,54,1266	0/0:19,0:18:45.15:0,45,1084	0/0:22,0:22:63.22:0,63,1534	0/0:24,0:24:63.22:0,63,1479	0/0:24,0:24:72.23:0,72,1696	0/0:36,0:36:99:0,99,2232	0/0:23,0:23:63.20:0,63,1400	1/1:7,14:20:42.07:589,42,0	1/1:2,22:24:66.06:998,66,0	1/1:2,29:31:27.09:458,27,0	1/1:1,17:17:48.12:761,48,0	0/0:18,0:18:45.14:0,45,1007	0/0:35,0:35:93.17:0,93,1981	0/0:18,0:18:45.12:0,45,916	0/0:29,0:29:78.22:0,78,1730	1/1:2,17:19:39.13:683,39,0	0/0:24,0:24:72.25:0,72,1720
chr10	84964713	.	C	CAA	8269.71	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-7.079;DP=587;FS=1.094;HRun=8;HaplotypeScore=76.3239;InbreedingCoeff=0.9737;MQ=76.20;MQ0=1;MQRankSum=-2.610;QD=32.56;ReadPosRankSum=1.329;VQSLOD=5.0127;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:45:99:0,117,1341	1/1:1,7:8:21.07:333,21,0	0/0:34,0:30:29.71:0,30,624	0/0:18,0:17:20.30:0,20,228	0/0:33,0:33:87.22:0,87,970	0/0:16,0:16:42.11:0,42,468	0/0:21,0:21:54.14:0,54,602	0/0:29,0:31:74.86:0,75,865	1/1:5,0:18:42.04:396,42,0	1/1:10,16:29:56.68:854,57,0	1/1:3,17:21:48.08:698,48,0	0/0:12,0:12:33.06:0,33,359	0/0:15,0:15:18.10:0,18,319	0/0:17,0:17:48.12:0,48,535	1/1:2,22:26:54.18:857,54,0	1/1:1,14:15:39.13:600,39,0	1/1:2,18:20:51.17:806,51,0	0/0:13,0:13:36.09:0,36,400	1/1:8,22:31:60.20:947,60,0	1/1:0,19:20:59.61:850,60,0	1/1:4,10:14:18.06:286,18,0	1/1:3,13:16:39.09:591,39,0	0/0:21,0:21:44.74:0,45,499	0/0:21,0:21:60.16:0,60,669	1/1:1,1:16:42.07:431,42,0	0/0:23,0:23:3.38:0,3,448	1/1:3,13:17:41.63:619,42,0	0/0:11,0:11:27.06:0,27,301
chr10	84965342	.	TA	T	8567.99	PASS	AB=0.900;AC=33;AF=0.589;AN=56;BaseQRankSum=10.175;DP=410;FS=1.756;HRun=2;HaplotypeScore=42.8974;InbreedingCoeff=0.9139;MQ=74.21;MQ0=0;MQRankSum=-1.296;QD=30.82;ReadPosRankSum=1.529;VQSLOD=4.3649;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:39.06:484,39,0	1/1:0,7:7:18.04:218,18,0	0/0:7,0:7:14.02:0,14,224	0/0:9,0:9:24.06:0,24,312	0/0:12,0:12:36.10:0,36,495	0/0:20,0:20:60.18:0,60,850	1/1:0,12:12:30.10:389,30,0	1/1:1,27:28:81.22:1008,81,0	1/1:0,13:13:27.09:349,27,0	1/1:2,17:19:48.15:608,48,0	1/1:2,18:20:54.15:681,54,0	0/0:8,0:8:24.08:0,24,355	0/0:11,0:11:30.10:0,30,442	0/0:11,0:11:33.08:0,33,434	1/1:0,11:11:30.10:389,30,0	1/1:0,14:14:36.12:466,36,0	1/1:0,16:16:45.15:582,45,0	0/0:15,0:15:45.14:0,45,645	1/1:0,15:15:45.12:556,45,0	1/1:0,18:18:54.18:699,54,0	1/1:0,12:12:36.12:467,36,0	1/1:3,6:9:21.05:257,21,0	0/0:13,0:13:35.95:0,36,515	0/0:4,0:4:9.03:0,9,133	1/1:1,20:21:57.19:739,57,0	0/1:24,3:27:16.54:17,0,934	1/1:0,20:20:51.17:660,51,0	0/0:22,0:22:63.18:0,63,884
chr10	84967290	.	CA	C	7630.60	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=13.659;DP=534;FS=8.075;HRun=7;HaplotypeScore=67.4251;InbreedingCoeff=0.9988;MQ=83.02;MQ0=0;MQRankSum=-3.880;QD=25.52;ReadPosRankSum=2.134;VQSLOD=5.5187;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:99:1163,114,0	1/1:1,7:8:21.05:214,21,0	0/0:18,0:18:39.08:0,39,444	0/0:15,0:15:36.02:0,36,406	0/0:18,0:18:51.16:0,51,641	0/0:13,0:13:36.11:0,36,444	0/0:18,0:18:48.13:0,48,578	1/1:6,12:18:33.03:327,33,0	1/1:0,22:22:57.13:581,57,0	1/1:3,27:30:84.17:848,84,0	1/1:1,15:16:42.09:428,42,0	0/0:23,0:23:66.19:0,66,804	0/0:15,0:15:45.14:0,45,566	0/0:21,0:21:57.18:0,57,710	1/1:1,17:18:42.09:428,42,0	1/1:0,17:17:48.11:490,48,0	1/1:1,22:23:57.13:581,57,0	0/0:23,0:23:51.12:0,51,624	1/1:2,11:13:30.06:306,30,0	1/1:0,14:14:39.08:398,39,0	1/1:2,29:31:72.16:734,72,0	1/1:5,13:18:30.06:306,30,0	0/0:12,0:12:30.10:0,30,377	0/0:25,0:25:63.17:0,63,765	1/1:3,8:11:24.05:245,24,0	0/0:22,0:22:66.21:0,66,825	1/1:1,20:21:57.13:581,57,0	0/0:12,0:12:30.10:0,30,376
chr10	84967394	.	C	CCAACTGGATT	23507.68	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-6.355;DP=401;FS=3.981;HRun=0;HaplotypeScore=111.1152;InbreedingCoeff=0.9900;MQ=94.10;MQ0=0;MQRankSum=-14.943;QD=122.44;ReadPosRankSum=-1.087;VQSLOD=5.5222;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,13:23:60.21:2862,60,0	1/1:2,2:4:12.04:562,12,0	0/0:22,0:22:66.06:0,66,1979	0/0:22,0:22:63.17:0,63,1745	0/0:10,0:10:30.10:0,30,959	0/0:13,0:13:39.12:0,39,1268	0/0:14,0:14:42.12:0,42,1386	1/1:5,5:14:39.13:1718,39,0	1/1:3,9:14:39.13:2028,39,0	1/1:6,9:15:36.11:1444,36,0	1/1:1,5:6:18.06:842,18,0	0/0:17,0:17:48.16:0,48,1677	0/0:12,0:12:36.12:0,36,1199	0/0:20,0:20:60.21:0,60,2037	1/1:2,10:13:36.12:1870,36,0	1/1:4,5:9:27.09:1298,27,0	1/1:5,7:14:33.11:1495,33,0	0/0:29,0:29:87.27:0,87,2780	1/1:4,5:12:36.11:1516,36,0	1/1:1,7:8:21.07:1114,21,0	1/1:9,8:21:42.14:1932,42,0	1/1:2,7:10:27.09:1417,27,0	0/0:5,0:5:15.05:0,15,524	0/0:28,0:28:81.26:0,81,2656	1/1:0,8:10:24.08:1297,24,0	0/0:11,0:11:30.10:0,30,1032	1/1:3,12:18:44.81:2111,45,0	0/0:6,0:6:18.06:0,18,629
chr10	84967668	.	AT	A	1562.44	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=2.872;DP=217;FS=18.402;HRun=1;HaplotypeScore=44.7265;InbreedingCoeff=0.7389;MQ=91.55;MQ0=1;MQRankSum=-2.737;QD=11.49;ReadPosRankSum=-5.194;VQSLOD=-0.7651;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:23.20:157,23,0	1/1:4,0:4:8.72:61,9,0	0/0:8,0:8:17.59:0,18,203	0/0:17,0:15:20.64:0,21,323	0/0:8,0:8:21.07:0,21,335	0/0:8,0:8:24.07:0,24,351	1/1:12,1:15:33.94:255,34,0	1/1:0,9:9:26.75:192,27,0	1/1:3,0:3:5.99:48,6,0	1/1:8,0:8:20.57:168,21,0	1/1:4,0:4:5.98:46,6,0	0/0:8,0:8:24.03:0,24,333	0/0:6,0:6:18.06:0,18,287	0/0:3,0:3:9.03:0,9,144	1/1:6,0:6:10.31:92,10,0	1/1:4,0:5:10.31:73,10,0	1/1:20,0:20:24.23:191,24,0	0/0:6,0:6:18.04:0,18,263	0/1:8,0:8:16.51:68,0,17	0/0:3,0:3:0.41:0,0,1	1/1:24,1:26:21.02:317,21,0	1/1:1,0:1:2.90:16,3,0	0/0:3,0:3:9.02:0,9,121	0/0:4,0:4:12.04:0,12,186	1/1:6,0:6:0.05:21,0,0	0/0:3,0:3:9.03:0,9,141	1/1:8,0:8:4.39:60,4,0	0/0:4,0:4:12.01:0,12,162
chr10	84967671	.	CCCA	C	494.88	PASS	AB=0.956;AC=20;AF=0.357;AN=56;BaseQRankSum=4.849;DP=213;FS=0.841;HRun=0;HaplotypeScore=57.4868;InbreedingCoeff=0.0890;MQ=91.87;MQ0=1;MQRankSum=1.240;QD=3.56;ReadPosRankSum=-3.353;VQSLOD=0.5940;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:1.12:1,0,1	0/1:4,0:4:13.20:23,0,13	0/1:4,2:7:59.42:59,0,152	0/1:13,5:16:99:132,0,326	0/0:7,0:7:21.07:0,21,463	0/0:8,0:8:24.08:0,24,457	0/1:14,0:14:11.04:49,0,11	1/1:8,0:8:12.79:98,13,0	1/1:2,0:2:3:25,3,0	0/1:6,0:6:13.48:14,0,13	1/1:4,0:4:2.82:25,3,0	0/0:7,0:7:21.07:0,21,440	0/0:6,0:6:18.06:0,18,397	0/0:4,0:4:12.04:0,12,241	0/1:6,0:6:9.98:23,0,10	1/1:6,0:6:0.46:2,0,0	0/1:20,0:20:47.74:48,0,66	0/0:6,0:6:18.06:0,18,373	0/0:10,0:10:13.95:0,14,116	0/0:3,0:3:5.59:0,6,45	0/1:26,0:25:99:137,0,107	1/1:1,0:1:0.47:1,0,0	0/0:3,0:3:9.02:0,9,157	0/0:5,0:5:12.04:0,12,237	0/1:6,0:6:11.75:12,0,50	0/0:3,0:3:9.03:0,9,198	0/0:8,0:8:11.52:0,12,83	0/0:4,0:4:9.03:0,9,198
chr10	84968288	.	G	GA	2096.39	PASS	AB=0.809;AC=27;AF=0.482;AN=56;BaseQRankSum=10.585;DP=481;FS=9.793;HRun=1;HaplotypeScore=107.7432;InbreedingCoeff=0.7637;MQ=65.04;MQ0=21;MQRankSum=-9.207;QD=11.15;ReadPosRankSum=-0.142;VQSLOD=0.8656;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,3:16:18.94:255,19,0	1/1:2,3:5:11.86:93,12,0	0/0:55,0:24:55.50:0,56,572	0/0:68,0:25:40.69:0,41,423	0/0:13,0:12:30.10:0,30,388	0/0:20,0:20:57.17:0,57,723	0/0:22,0:21:37.24:0,37,679	0/1:8,8:15:16.53:219,0,17	1/1:22,4:26:34.89:317,35,0	1/1:10,2:12:22.09:192,22,0	1/1:8,6:14:20.26:163,20,0	0/0:5,0:5:12.03:0,12,143	0/0:9,0:8:21.07:0,21,272	0/0:16,0:15:42.07:0,42,523	1/1:3,4:7:14.83:114,15,0	1/1:2,3:5:11.82:86,12,0	0/1:13,1:12:17.22:34,0,17	0/0:18,0:18:44.98:0,45,523	1/1:10,2:11:14.74:186,15,0	1/1:8,1:9:19.42:123,19,0	0/1:15,4:17:56.16:131,0,56	1/1:9,2:12:25.69:140,26,0	0/0:12,0:11:29.90:0,30,388	0/0:22,0:19:48.15:0,48,607	1/1:6,2:8:14.38:82,14,0	0/0:20,0:20:60.13:0,60,724	1/1:9,4:12:28.93:181,29,0	0/0:13,0:11:21.07:0,21,272
chr10	84968291	.	G	GA	1230.72	PASS	AB=0.784;AC=23;AF=0.411;AN=56;BaseQRankSum=11.613;DP=473;FS=5.669;HRun=0;HaplotypeScore=117.2345;InbreedingCoeff=0.5068;MQ=63.48;MQ0=24;MQRankSum=-9.226;QD=6.73;ReadPosRankSum=1.170;VQSLOD=3.3406;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,3:18:21.50:100,0,21	1/1:2,3:5:11.12:53,11,0	0/0:50,0:19:39.02:0,39,447	0/0:64,0:24:37.46:0,37,406	0/0:13,0:12:30.10:0,30,417	0/0:21,0:21:60.15:0,60,793	0/0:24,0:22:57.08:0,57,767	0/1:8,8:15:12.16:206,0,12	1/1:19,4:23:26.66:236,27,0	0/1:10,2:12:3.52:105,0,4	0/1:8,6:14:5.58:46,0,6	0/0:5,0:5:12.50:0,13,153	0/0:9,0:8:21.07:0,21,293	0/0:16,0:15:45.06:0,45,585	1/1:1,4:5:8.80:66,9,0	0/1:2,3:5:5.86:44,0,6	0/1:11,1:10:10.93:11,0,26	0/0:17,0:17:45.11:0,45,588	1/1:9,2:10:7.24:119,7,0	1/1:8,1:9:18.26:82,18,0	0/1:15,3:16:58.37:58,0,74	1/1:10,3:13:22.12:110,22,0	0/0:12,0:11:30.10:0,30,417	0/0:24,0:20:48.15:0,48,651	1/1:7,2:9:7.96:69,8,0	0/0:20,0:20:54.17:0,54,739	1/1:8,4:12:23.56:123,24,0	0/0:14,0:11:24.05:0,24,315
chr10	84968302	.	GA	G	1969.01	PASS	AB=0.681;AC=25;AF=0.446;AN=56;BaseQRankSum=9.357;DP=390;FS=3.389;HRun=1;HaplotypeScore=93.9998;InbreedingCoeff=0.5396;MQ=49.05;MQ0=37;MQRankSum=-9.650;QD=17.42;ReadPosRankSum=1.086;VQSLOD=4.0480;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,3:10:10.10:93,0,10	1/1:0,2:2:6.02:72,6,0	0/0:35,0:7:15.05:0,15,191	0/0:49,0:12:17.46:0,17,157	0/0:14,0:12:17.68:0,18,228	0/0:20,0:21:50.67:0,51,643	0/0:26,0:24:57.14:0,57,643	0/1:5,3:7:87.20:87,0,98	1/1:3,13:16:38.34:488,38,0	1/1:0,6:6:18.05:214,18,0	1/1:2,3:5:9:92,9,0	0/0:5,0:4:5.60:0,6,76	0/0:11,0:8:21.06:0,21,257	0/0:19,0:18:35.72:0,36,443	1/1:0,1:1:3.01:37,3,0	1/1:0,1:1:3.01:37,3,0	1/1:4,5:7:6.02:73,6,0	0/0:13,0:13:36.01:0,36,436	0/1:4,5:9:25.42:160,0,25	1/1:1,5:6:12.02:143,12,0	0/1:6,6:10:50.21:141,0,50	1/1:3,9:12:9.57:236,10,0	0/0:14,0:12:21.07:0,21,267	0/0:28,0:18:33.06:0,33,379	0/1:2,5:7:4.62:129,0,5	0/0:24,0:23:60.57:0,61,679	1/1:4,4:7:15.51:165,16,0	0/0:18,0:14:27.46:0,27,303
chr10	84968304	.	GA	G	2124.91	PASS	AB=0.970;AC=27;AF=0.482;AN=56;BaseQRankSum=11.493;DP=383;FS=12.102;HRun=1;HaplotypeScore=91.8556;InbreedingCoeff=0.6574;MQ=47.24;MQ0=40;MQRankSum=-10.450;QD=18.64;ReadPosRankSum=0.290;VQSLOD=2.6488;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,2:10:19.97:160,20,0	1/1:2,0:2:6.02:72,6,0	0/0:33,0:6:15.05:0,15,191	0/0:45,0:10:4.21:0,4,94	0/0:13,0:11:17.68:0,18,229	0/0:20,0:20:47.68:0,48,620	0/0:25,0:23:55.22:0,55,627	0/1:8,0:7:86.45:86,0,93	1/1:15,0:15:41.80:489,42,0	1/1:6,0:6:18.05:211,18,0	1/1:5,0:5:8.99:91,9,0	0/0:6,0:5:8.59:0,9,101	0/0:12,0:9:21.07:0,21,263	0/0:18,0:17:35.74:0,36,457	1/1:1,0:1:3.01:37,3,0	1/1:1,0:1:3.01:37,3,0	1/1:9,0:7:6.02:74,6,0	0/0:13,0:13:36.02:0,36,420	0/1:9,1:9:22.78:173,0,23	1/1:6,0:6:12.03:143,12,0	0/1:12,0:10:54.58:141,0,55	1/1:11,1:12:22.64:271,23,0	0/0:14,0:12:21.07:0,21,267	0/0:27,0:16:27.09:0,27,343	1/1:6,1:7:17.90:181,18,0	0/0:24,0:23:62.82:0,63,723	1/1:8,0:7:14.60:166,15,0	0/0:18,0:14:30.74:0,31,329
chr10	84968323	.	A	AAG	719.51	PASS	AC=16;AF=0.400;AN=40;BaseQRankSum=8.386;DP=231;FS=5.406;HRun=0;HaplotypeScore=81.1954;InbreedingCoeff=0.8078;MQ=39.70;MQ0=36;MQRankSum=-7.416;QD=21.16;ReadPosRankSum=-0.095;VQSLOD=3.7588;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,3:7:18.04:200,18,0	./.	./.	./.	0/0:9,0:7:11.27:0,11,180	0/0:18,0:17:39.13:0,39,580	0/0:19,0:17:33.08:0,33,441	./.	1/1:4,0:4:8.94:89,9,0	./.	./.	0/0:8,0:7:12.01:0,12,175	0/0:10,0:6:12.04:0,12,174	0/0:18,0:17:29.08:0,29,429	./.	./.	1/1:3,0:2:3.01:34,3,0	0/0:11,0:11:30.95:0,31,396	1/1:4,0:3:9.02:98,9,0	1/1:3,0:3:9.02:94,9,0	0/0:5,0:3:0.48:0,0,37	1/1:5,2:7:21.05:231,21,0	0/0:11,0:10:11.20:0,11,170	0/0:30,0:19:24.08:0,24,356	1/1:2,0:2:6.01:61,6,0	0/0:21,0:20:57.18:0,57,796	1/1:1,1:2:6.02:73,6,0	0/0:17,0:13:30.77:0,31,372
chr10	84968332	.	GA	G	308.36	PASS	AC=18;AF=0.391;AN=46;BaseQRankSum=8.462;DP=264;FS=0.000;HRun=1;HaplotypeScore=74.1369;InbreedingCoeff=0.7986;MQ=41.38;MQ0=32;MQRankSum=-7.119;QD=7.34;ReadPosRankSum=4.615;VQSLOD=0.7955;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:7:14.87:61,15,0	./.	0/0:5,0:2:6.02:0,6,75	0/0:11,0:4:9.03:0,9,113	0/0:14,0:12:14.67:0,15,188	0/0:18,0:17:30.05:0,30,372	0/0:22,0:21:40.42:0,40,473	1/1:2,0:1:1.55:4,2,0	1/1:6,0:6:10.32:32,10,0	./.	./.	0/0:13,0:12:20.58:0,21,247	0/0:11,0:7:15.04:0,15,182	0/0:19,0:18:26.61:0,27,327	./.	./.	1/1:1,3:3:3:34,3,0	0/0:14,0:14:36.97:0,37,438	1/1:4,0:3:8.66:65,9,0	1/1:4,0:3:8.95:66,9,0	0/0:7,0:5:3.01:0,3,38	1/1:8,0:8:20.97:149,21,0	0/0:15,0:14:21.07:0,21,264	0/0:33,0:22:42.09:0,42,512	1/1:2,0:2:5.54:25,6,0	0/0:23,0:22:66.09:0,66,796	1/1:3,0:3:6.41:43,6,0	0/0:15,0:12:25.89:0,26,327
chr10	84968334	.	GA	G	915.77	PASS	AC=18;AF=0.391;AN=46;BaseQRankSum=8.794;DP=279;FS=0.730;HRun=1;HaplotypeScore=73.5757;InbreedingCoeff=0.8374;MQ=41.90;MQ0=33;MQRankSum=-7.297;QD=21.80;ReadPosRankSum=5.391;VQSLOD=3.7899;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,6:7:18.06:218,18,0	./.	0/0:7,0:4:12.03:0,12,140	0/0:15,0:5:12.04:0,12,149	0/0:19,0:17:32.69:0,33,373	0/0:16,0:15:36.11:0,36,463	0/0:22,0:21:40.40:0,40,459	1/1:1,1:1:3.01:37,3,0	1/1:2,4:6:15.05:186,15,0	./.	./.	0/0:13,0:12:23.61:0,24,296	0/0:11,0:7:15.04:0,15,178	0/0:21,0:20:29.63:0,30,377	./.	./.	1/1:4,0:3:2.84:36,3,0	0/0:15,0:15:37:0,37,456	1/1:1,3:3:9.03:103,9,0	1/1:1,3:3:9.03:107,9,0	0/0:5,2:5:3.01:0,3,38	1/1:0,8:8:22.87:244,23,0	0/0:19,0:18:27.06:0,27,315	0/0:32,0:22:45.14:0,45,567	1/1:1,1:2:6.02:70,6,0	0/0:23,0:22:66.18:0,66,806	1/1:0,3:3:9:91,9,0	0/0:15,0:12:26.98:0,27,336
chr10	84968350	.	GA	G	1036.29	PASS	AB=1.000;AC=18;AF=0.333;AN=54;BaseQRankSum=7.870;DP=356;FS=17.347;HRun=1;HaplotypeScore=92.0896;InbreedingCoeff=0.8248;MQ=58.24;MQ0=34;MQRankSum=-7.354;QD=17.56;ReadPosRankSum=1.635;VQSLOD=2.7770;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:11:23.88:0,24,108	./.	0/0:20,0:12:26.75:0,27,313	0/0:30,0:13:19.17:0,19,280	0/0:21,0:21:50.78:0,51,628	0/0:17,0:16:39.12:0,39,501	0/0:23,0:23:52.48:0,52,639	0/0:5,0:5:11.35:0,11,55	0/0:12,0:12:23.57:0,24,118	0/1:5,0:5:0.37:57,0,0	1/1:3,0:1:2.97:20,3,0	0/0:15,0:14:30.10:0,30,377	0/0:9,0:5:9.03:0,9,105	0/0:20,0:19:29.63:0,30,376	0/1:1,0:1:0:0,0,0	1/1:1,0:1:3.01:33,3,0	1/1:3,0:3:9.02:97,9,0	0/0:14,0:14:36.59:0,37,454	1/1:0,5:5:15.04:166,15,0	1/1:1,8:8:15.51:171,16,0	1/1:5,6:8:8.92:102,9,0	1/1:0,12:11:33.09:376,33,0	0/0:24,0:23:45.13:0,45,553	0/0:30,0:21:51.12:0,51,624	0/0:7,0:7:11.73:0,12,42	0/0:23,0:22:66.12:0,66,803	1/1:0,9:8:18.04:198,18,0	0/0:14,0:13:30.10:0,30,397
chr10	84969277	.	T	TA	4134.95	PASS	AB=0.801;AC=30;AF=0.536;AN=56;BaseQRankSum=0.164;DP=379;FS=1.628;HRun=12;HaplotypeScore=48.8531;InbreedingCoeff=0.7014;MQ=58.94;MQ0=6;MQRankSum=-1.004;QD=16.03;ReadPosRankSum=0.296;VQSLOD=4.5353;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,15:19:26.17:410,26,0	1/1:0,8:8:23.98:221,24,0	0/1:18,1:8:5.01:5,0,23	0/1:16,0:8:3.91:4,0,45	0/0:23,0:23:39.45:0,39,274	0/0:14,0:14:29.82:0,30,219	0/0:7,0:7:11.93:0,12,87	1/1:5,19:21:48.04:450,48,0	0/1:2,5:7:6.88:102,0,7	1/1:8,11:19:39.05:372,39,0	1/1:9,12:21:39.05:375,39,0	0/0:3,0:4:8:0,8,50	0/0:7,0:7:11.88:0,12,86	0/0:5,0:5:8.83:0,9,66	1/1:3,10:13:27.04:263,27,0	1/1:3,10:13:11.14:269,11,0	1/1:5,12:17:41.97:384,42,0	0/0:18,0:17:38.78:0,39,284	1/1:8,8:15:27.02:252,27,0	1/1:5,6:10:18.03:175,18,0	0/1:4,4:8:22.79:120,0,23	1/1:1,1:2:3:29,3,0	0/0:7,0:7:14.90:0,15,109	0/0:5,0:5:14.91:0,15,109	1/1:5,8:13:27.04:259,27,0	0/0:16,0:17:43.55:0,44,303	1/1:9,18:27:29.18:445,29,0	0/0:14,0:14:35.76:0,36,260
chr10	84969355	.	TA	T	4301.44	PASS	AC=30;AF=0.556;AN=54;BaseQRankSum=8.271;DP=316;FS=4.217;HRun=9;HaplotypeScore=36.0089;InbreedingCoeff=0.8851;MQ=58.46;MQ0=4;MQRankSum=2.753;QD=22.17;ReadPosRankSum=0.199;VQSLOD=5.1099;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:42.02:384,42,0	1/1:1,7:8:24.01:219,24,0	./.	0/0:3,0:3:4.25:0,4,37	0/0:26,0:26:75.21:0,75,857	0/0:10,0:10:24.07:0,24,277	0/0:0,0:2:5.68:0,6,29	1/1:3,10:10:26.99:241,27,0	1/1:0,3:3:9:82,9,0	1/1:3,18:21:51.02:467,51,0	1/1:1,23:23:63.03:576,63,0	0/0:3,0:3:6.02:0,6,69	0/0:8,0:9:26.91:0,27,291	0/0:3,0:3:5.88:0,6,69	1/1:3,3:6:12:110,12,0	1/1:3,6:9:21.01:192,21,0	1/1:2,24:26:66.03:604,66,0	0/0:20,0:20:48.14:0,48,554	1/1:2,18:20:24.85:410,25,0	1/1:1,13:14:36.01:329,36,0	1/1:1,7:8:21.01:192,21,0	1/1:0,1:1:3:27,3,0	0/0:5,0:5:12.04:0,12,138	0/0:6,0:6:18.05:0,18,208	1/1:2,7:9:21.01:192,21,0	0/0:17,1:16:17.67:0,18,455	1/1:4,9:13:30.01:274,30,0	0/0:16,0:15:42.08:0,42,451
chr10	84969686	.	GA	G	4347.68	PASS	AB=0.749;AC=30;AF=0.536;AN=56;BaseQRankSum=6.549;DP=526;FS=6.921;HRun=11;HaplotypeScore=55.9489;InbreedingCoeff=0.8725;MQ=60.21;MQ0=19;MQRankSum=1.093;QD=14.25;ReadPosRankSum=2.788;VQSLOD=5.0611;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,33:39:74.88:615,75,0	1/1:2,5:6:14.98:123,15,0	0/1:10,1:6:7.10:7,0,112	0/0:11,0:8:18.04:0,18,187	0/0:36,0:35:78.21:0,78,831	0/0:22,0:21:46.63:0,47,472	0/0:14,0:16:38.72:0,39,368	1/1:9,13:22:34.96:277,35,0	1/1:1,12:12:14.98:123,15,0	1/1:5,24:27:68.88:564,69,0	1/1:5,12:16:26.94:221,27,0	0/0:20,0:19:47.31:0,47,459	0/0:12,0:12:8.52:0,9,295	0/0:10,0:10:26.74:0,27,267	1/1:7,20:25:41.93:345,42,0	1/1:3,7:10:14.95:123,15,0	1/1:9,18:24:35.94:296,36,0	0/0:23,0:23:59.59:0,60,571	1/1:3,16:19:50.89:412,51,0	1/1:2,14:16:35.86:288,36,0	1/1:4,9:11:23.96:197,24,0	1/1:1,12:13:26.94:222,27,0	0/0:15,1:16:17.42:0,17,376	0/0:29,2:30:25.90:0,26,686	0/1:5,13:17:2:192,0,2	0/0:18,0:16:36.04:0,36,364	1/1:2,20:22:41.36:344,41,0	0/0:6,0:5:12.03:0,12,128
chr10	84969849	.	C	CGT	2001.56	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.657;DP=752;FS=6.450;HRun=0;HaplotypeScore=100.5020;InbreedingCoeff=0.9979;MQ=65.25;MQ0=3;MQRankSum=-1.740;QD=29.43;ReadPosRankSum=-1.260;VQSLOD=4.5494;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,34:38:75.26:1245,75,0	0/0:11,0:11:33.11:0,33,415	0/0:41,0:32:66.07:0,66,776	0/0:50,0:36:59.34:0,59,778	0/0:19,0:19:30.18:0,30,590	0/0:21,0:21:60.19:0,60,756	0/0:9,0:36:56.82:0,57,279	1/1:10,20:30:27.81:878,28,0	0/0:23,0:23:63.20:0,63,783	0/0:29,0:29:66.21:0,66,825	0/0:10,0:12:26.92:0,27,317	0/0:28,0:28:63.20:0,63,790	0/0:20,0:20:51.13:0,51,608	0/0:18,0:18:45.14:0,45,567	0/0:33,0:33:78.23:0,78,968	0/0:22,0:22:57.16:0,57,690	0/0:31,0:32:75.05:0,75,905	0/0:26,0:26:62.96:0,63,752	0/0:23,0:22:47.98:0,48,579	0/0:20,0:20:57.13:0,57,699	0/0:73,0:73:99:0,181,2237	0/0:17,0:17:36.12:0,36,453	0/0:17,0:17:48.14:0,48,591	0/0:28,0:28:69.20:0,69,855	0/0:17,0:17:36.11:0,36,446	0/0:26,0:26:66.20:0,66,820	0/0:25,0:26:60.01:0,60,716	0/0:15,0:15:27.09:0,27,338
chr10	84970109	.	CTTTTT	C	7127.34	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=9.060;DP=514;FS=0.788;HRun=16;HaplotypeScore=123.3168;InbreedingCoeff=0.9821;MQ=62.01;MQ0=0;MQRankSum=-11.053;QD=25.10;ReadPosRankSum=5.109;VQSLOD=3.3291;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:29:47.93:747,48,0	1/1:4,7:12:19.34:349,19,0	0/0:16,0:9:21.81:0,22,240	0/0:21,0:12:20.43:0,20,287	0/0:25,0:26:65.91:0,66,1297	0/0:13,0:16:42.12:0,42,865	0/0:13,0:25:48.12:0,48,723	1/1:7,13:20:41.46:597,41,0	1/1:4,17:21:45.01:700,45,0	1/1:5,14:19:41.71:595,42,0	1/1:4,8:14:22.08:322,22,0	0/0:7,0:9:23.75:0,24,480	0/0:7,0:7:21.03:0,21,435	0/0:14,0:15:39.10:0,39,771	1/1:5,9:14:23.94:374,24,0	1/1:3,7:11:23.51:325,24,0	1/1:5,23:28:50.91:794,51,0	0/0:17,0:20:54.11:0,54,1170	1/1:7,0:20:29.89:316,30,0	1/1:3,1:17:37.85:358,38,0	1/1:0,0:9:20.63:185,21,0	1/1:3,0:20:31.71:358,32,0	0/0:20,0:22:63.19:0,63,1273	0/0:16,0:20:48.16:0,48,1152	1/1:3,17:20:31.02:585,31,0	0/0:20,1:23:7.42:0,7,1005	1/1:4,0:30:55.95:520,56,0	0/0:9,0:10:15.04:0,15,253
chr10	84971032	.	C	CA	17047.04	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-17.067;DP=721;FS=1.605;HRun=1;HaplotypeScore=69.1638;InbreedingCoeff=0.9987;MQ=88.31;MQ0=0;MQRankSum=-3.014;QD=40.40;ReadPosRankSum=1.923;VQSLOD=5.5610;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,46:48:99:1844,123,0	1/1:1,10:11:27.09:405,27,0	0/0:40,0:40:99:0,108,1374	0/0:24,0:24:30.54:0,31,546	0/0:21,0:21:60.17:0,60,750	0/0:21,0:21:63.20:0,63,817	0/0:18,0:18:54.15:0,54,672	1/1:2,35:37:99:1533,105,0	1/1:0,31:31:84.28:1259,84,0	1/1:4,30:34:90.30:1349,90,0	1/1:1,27:28:75.25:1124,75,0	0/0:30,0:30:90.27:0,90,1140	0/0:21,0:21:57.16:0,57,723	0/0:16,0:16:48.16:0,48,623	1/1:0,35:35:90.11:1349,90,0	1/1:0,26:25:75.25:1124,75,0	1/1:0,28:28:75.25:1124,75,0	0/0:12,0:12:36.12:0,36,467	1/1:1,23:24:69.22:1015,69,0	1/1:0,26:26:72.20:1054,72,0	1/1:0,23:23:66.22:989,66,0	1/1:1,20:21:54.18:809,54,0	0/0:30,0:30:84.27:0,84,1091	0/0:29,0:29:87.28:0,87,1130	1/1:0,26:26:72.24:1079,72,0	0/0:22,1:23:18.22:0,18,734	1/1:0,24:24:66.22:989,66,0	0/0:13,0:13:39.13:0,39,503
chr10	84972042	.	G	GT	1254.47	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.712;DP=531;FS=29.430;HRun=9;HaplotypeScore=87.5001;InbreedingCoeff=0.8669;MQ=70.28;MQ0=8;MQRankSum=-2.758;QD=18.45;ReadPosRankSum=-2.083;VQSLOD=1.7739;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,11:29:55.78:635,56,0	0/0:15,0:15:32.62:0,33,259	0/0:27,0:12:8.01:0,8,155	0/0:24,0:14:19.08:0,19,150	0/0:18,0:18:41.98:0,42,364	0/0:12,0:12:32.98:0,33,286	0/0:24,0:24:41.97:0,42,361	1/1:20,18:38:72.66:741,73,0	0/0:15,0:15:26.58:0,27,207	0/0:21,0:21:50.28:0,50,412	0/0:22,0:22:44.82:0,45,374	0/0:8,0:8:20.99:0,21,182	0/0:11,0:11:26.99:0,27,234	0/0:9,0:9:26.99:0,27,234	0/0:13,0:13:23.99:0,24,207	0/0:5,0:5:11.92:0,12,91	0/0:32,0:31:55.27:0,55,433	0/0:22,0:22:56.61:0,57,472	0/0:31,0:31:66.34:0,66,469	0/0:40,0:40:67.34:0,67,477	0/0:9,0:9:14.05:0,14,68	0/0:10,0:10:6.64:0,7,58	0/0:14,0:14:38.99:0,39,338	0/0:14,0:14:32.98:0,33,286	0/0:24,0:24:41.97:0,42,359	0/0:16,0:16:44.97:0,45,386	0/0:23,0:22:39.71:0,40,242	0/0:4,0:4:9:0,9,78
chr10	84972053	.	C	CTT	5070.53	PASS	AB=0.579;AC=29;AF=0.518;AN=56;BaseQRankSum=5.493;DP=551;FS=18.043;HRun=10;HaplotypeScore=82.0917;InbreedingCoeff=0.9011;MQ=64.84;MQ0=25;MQRankSum=-0.174;QD=15.70;ReadPosRankSum=0.636;VQSLOD=1.8011;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:27:39.46:216,39,0	0/1:3,8:11:6.44:288,0,6	0/0:31,0:11:9.61:0,10,87	0/0:29,0:10:11.34:0,11,91	0/0:23,0:23:63.08:0,63,628	0/0:12,0:14:38.56:0,39,357	0/0:1,0:25:35.67:0,36,154	1/1:13,0:34:62.03:349,62,0	1/1:1,14:15:24.08:357,24,0	1/1:9,18:27:59.26:789,59,0	1/1:6,12:19:40.78:481,41,0	0/0:9,0:9:21.04:0,21,213	0/0:11,0:11:30.06:0,30,305	0/0:10,0:10:24.03:0,24,237	1/1:0,15:15:30.10:447,30,0	1/1:2,4:7:14.52:160,15,0	1/1:3,20:28:51.09:581,51,0	0/0:25,0:25:53.39:0,53,515	1/1:4,0:27:27.77:171,28,0	1/1:5,1:36:11.27:232,11,0	1/1:0,0:11:12.48:44,12,0	1/1:1,0:10:17.59:78,18,0	0/0:14,0:14:27.02:0,27,274	0/0:16,0:16:39:0,39,372	1/1:4,24:28:54.14:779,54,0	0/0:17,0:16:32.96:0,33,322	1/1:4,0:22:28.39:98,28,0	0/0:3,0:3:6.01:0,6,61
chr10	84972619	.	C	CG	6738.08	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=13.626;DP=477;FS=0.000;HRun=5;HaplotypeScore=72.6439;InbreedingCoeff=0.9758;MQ=62.53;MQ0=2;MQRankSum=0.216;QD=26.22;ReadPosRankSum=1.378;VQSLOD=4.2995;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:30:72.22:893,72,0	1/1:2,4:6:9.03:111,9,0	0/0:12,0:10:11.81:0,12,124	0/0:9,0:3:8.01:0,8,53	0/0:15,0:15:30.05:0,30,307	0/0:22,0:22:56.88:0,57,538	0/0:25,0:25:57.04:0,57,598	1/1:4,14:18:45.02:491,45,0	1/1:0,7:7:18.04:213,18,0	1/1:2,15:17:42.09:499,42,0	1/1:1,11:12:29.99:359,30,0	0/0:18,0:18:47.31:0,47,440	0/0:22,0:22:57.09:0,57,591	0/0:13,0:13:32.99:0,33,318	1/1:0,16:16:42.13:528,42,0	1/1:3,15:18:34.35:419,34,0	1/1:2,24:27:60.62:741,61,0	0/0:26,0:26:69.08:0,69,694	1/1:5,10:14:28.89:326,29,0	1/1:0,20:21:50.92:561,51,0	1/1:4,17:21:34.66:418,35,0	1/1:1,14:15:33.05:394,33,0	0/0:12,0:12:30.05:0,30,307	0/0:16,0:16:39.05:0,39,398	1/1:2,15:17:30.04:357,30,0	0/0:22,0:22:37.47:0,37,510	1/1:2,14:16:35.87:428,36,0	0/0:8,0:8:24.05:0,24,249
chr10	84972624	.	G	GA	1601.16	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=14.318;DP=472;FS=5.346;HRun=10;HaplotypeScore=88.6898;InbreedingCoeff=0.8267;MQ=64.20;MQ0=2;MQRankSum=0.277;QD=6.33;ReadPosRankSum=3.676;VQSLOD=1.6189;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:31.54:242,32,0	0/1:4,0:4:0.63:25,0,1	0/0:11,0:9:19.96:0,20,139	0/0:5,0:4:8.93:0,9,67	0/0:16,0:16:28.89:0,29,240	0/0:20,0:21:46.94:0,47,370	0/0:22,1:23:25.12:0,25,405	1/1:17,0:16:23.27:121,23,0	1/1:9,0:9:4.22:59,4,0	1/1:15,0:15:31.78:141,32,0	1/1:11,0:11:24.30:102,24,0	0/0:18,0:18:35.92:0,36,293	0/0:21,0:22:64.89:0,65,511	0/0:15,0:15:31.72:0,32,241	1/1:16,0:16:37.85:159,38,0	1/1:18,0:18:1.70:90,2,0	1/1:28,0:28:28.97:195,29,0	0/0:25,0:25:59.85:0,60,483	1/1:18,0:17:6.78:87,7,0	1/1:20,0:20:19.26:156,19,0	0/1:18,0:18:4.39:85,0,4	1/1:17,0:17:8.38:97,8,0	0/0:12,0:12:26.93:0,27,218	0/0:14,2:16:35:0,35,288	1/1:15,0:15:17.70:110,18,0	0/0:24,1:25:22.10:0,22,379	1/1:15,0:15:30.60:149,31,0	0/0:10,0:10:26.95:0,27,218
chr10	84973794	.	TAC	T	102.29	PASS	AB=0.964;AC=4;AF=0.074;AN=54;BaseQRankSum=1.489;DP=362;FS=1.616;HRun=0;HaplotypeScore=106.2575;InbreedingCoeff=0.3779;MQ=53.83;MQ0=3;MQRankSum=0.062;QD=2.18;ReadPosRankSum=0.062;VQSLOD=2.2209;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:12.04:0,12,195	0/0:5,0:5:9.03:0,9,133	0/0:20,0:7:18.91:0,19,258	0/1:12,1:10:9.57:10,0,291	0/0:11,0:11:23.85:0,24,404	0/0:9,0:9:9.03:0,9,156	1/1:2,14:16:15.04:188,15,0	0/0:36,0:36:90.20:0,90,1475	0/0:4,0:4:6.02:0,6,84	0/0:21,0:21:60.19:0,60,971	0/0:17,0:17:17.55:0,18,297	0/0:8,0:8:15.05:0,15,252	0/0:12,0:12:15.05:0,15,244	0/0:10,0:10:12.04:0,12,203	0/0:26,0:26:21.07:0,21,359	0/0:12,0:12:12.51:0,13,204	0/0:12,0:11:15.05:0,15,241	0/0:11,0:11:27.02:0,27,393	0/0:3,0:3:9.03:0,9,152	0/1:18,0:18:0:0,0,0	./.	0/0:7,0:7:3:0,3,37	0/0:11,0:11:6.02:0,6,104	0/0:5,0:5:12.04:0,12,194	0/0:16,0:16:6.02:0,6,104	0/0:20,0:20:57.06:0,57,867	0/0:12,0:12:18.06:0,18,311	0/0:2,0:2:3.01:0,3,52
chr10	84973822	.	T	TGAG	1657.16	PASS	AB=0.773;AC=4;AF=0.071;AN=56;BaseQRankSum=8.808;DP=452;FS=2.396;HRun=0;HaplotypeScore=125.9819;InbreedingCoeff=-0.0786;MQ=71.15;MQ0=0;MQRankSum=-6.776;QD=24.73;ReadPosRankSum=-0.168;VQSLOD=3.8072;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.28:0,81,1427	0/0:9,0:9:27.09:0,27,476	0/0:18,0:17:45.14:0,45,767	0/0:15,0:14:39.13:0,39,669	0/0:13,0:13:39.13:0,39,688	0/0:11,0:11:33.07:0,33,549	0/0:21,0:21:48.12:0,48,813	0/0:43,0:41:99:0,123,1989	0/1:11,1:12:99:281,0,321	0/0:28,0:28:72.23:0,72,1229	0/0:22,0:22:60.20:0,60,1045	0/0:11,0:11:15.19:0,15,505	0/0:12,0:12:36.08:0,36,596	0/0:13,0:13:39.12:0,39,660	0/0:26,0:26:78.27:0,78,1368	0/0:18,0:18:54.19:0,54,952	0/0:16,0:15:33.69:0,34,779	0/0:12,0:12:33.11:0,33,582	0/0:10,0:10:30.10:0,30,526	0/1:20,7:27:99:690,0,665	0/0:11,0:11:27.09:0,27,476	0/1:4,5:9:99:328,0,134	0/0:13,0:13:36.12:0,36,635	0/0:7,0:7:21.07:0,21,370	0/0:7,0:7:21.07:0,21,370	0/0:15,0:15:42.14:0,42,741	0/1:12,7:19:99:467,0,329	0/0:5,0:5:15.05:0,15,265
chr10	84973842	.	GT	G	53.01	PASS	AB=0.731;AC=3;AF=0.054;AN=56;BaseQRankSum=4.841;DP=438;FS=1.345;HRun=2;HaplotypeScore=78.9053;InbreedingCoeff=0.4603;MQ=82.47;MQ0=0;MQRankSum=-4.037;QD=2.21;ReadPosRankSum=1.234;VQSLOD=-0.6571;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.09:0,72,999	0/0:8,0:8:24.08:0,24,359	0/0:21,0:21:60.17:0,60,860	0/0:12,0:12:29.92:0,30,407	0/0:13,0:13:36.12:0,36,532	0/0:16,0:16:45.15:0,45,672	0/0:20,0:20:48.16:0,48,718	0/0:37,0:35:99:0,102,1467	0/0:11,1:12:33.05:0,33,443	0/0:30,0:30:90.30:0,90,1348	0/0:19,0:19:51.17:0,51,763	0/0:12,0:12:35.98:0,36,463	0/0:8,0:8:24.08:0,24,360	0/0:16,0:16:48.15:0,48,696	0/0:25,0:25:72.18:0,72,1019	0/0:19,0:19:57.19:0,57,841	0/0:21,0:21:63.17:0,63,917	0/0:10,0:10:30.10:0,30,449	0/0:9,0:9:21.03:0,21,258	0/0:11,8:19:3.09:0,3,251	0/0:14,0:14:15.04:0,15,186	1/1:0,5:5:5.63:36,6,0	0/0:11,0:11:33.07:0,33,459	0/0:11,0:11:30.10:0,30,450	0/0:9,0:9:27.09:0,27,404	0/0:11,0:11:33.11:0,33,487	0/1:12,7:19:99:111,0,388	0/0:5,0:5:15.02:0,15,202
chr10	84974047	.	A	AG	15122.87	PASS	AB=0.816;AC=53;AF=0.946;AN=56;BaseQRankSum=-11.048;DP=571;FS=12.468;HRun=2;HaplotypeScore=80.7424;InbreedingCoeff=-0.0629;MQ=77.56;MQ0=2;MQRankSum=1.011;QD=26.48;ReadPosRankSum=6.698;VQSLOD=3.1900;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:47.38:884,47,0	1/1:0,3:3:6.02:86,6,0	0/1:53,6:38:99:169,0,439	0/1:73,4:44:75.99:76,0,571	0/1:3,7:10:16.08:215,0,16	1/1:1,18:19:51.17:734,51,0	1/1:0,24:25:67.11:953,67,0	1/1:4,18:22:49.40:671,49,0	1/1:1,18:19:57.18:805,57,0	1/1:2,17:19:51.17:718,51,0	1/1:0,14:14:29.67:407,30,0	1/1:0,13:13:33.11:475,33,0	1/1:0,9:9:23.95:345,24,0	1/1:1,9:10:21.07:302,21,0	1/1:0,21:21:54.18:777,54,0	1/1:1,18:19:51.17:731,51,0	1/1:2,30:32:53.05:1011,53,0	1/1:0,18:18:48.16:685,48,0	1/1:1,14:15:39.13:561,39,0	1/1:0,7:7:15.05:216,15,0	1/1:1,24:25:60.20:864,60,0	1/1:0,7:7:12.04:173,12,0	1/1:0,7:7:15.01:192,15,0	1/1:3,32:35:50.38:1133,50,0	1/1:1,13:14:27.09:383,27,0	1/1:0,15:15:42.14:605,42,0	1/1:0,17:17:39.13:561,39,0	1/1:0,9:9:27.09:389,27,0
chr10	84974381	.	CAATA	C	1006.53	PASS	AB=0.909;AC=18;AF=0.474;AN=38;BaseQRankSum=4.089;DP=220;FS=23.212;HRun=0;HaplotypeScore=37.0034;InbreedingCoeff=0.5248;MQ=66.25;MQ0=2;MQRankSum=-0.255;QD=11.18;ReadPosRankSum=0.269;VQSLOD=1.0066;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,0:3:5.99:68,6,0	./.	./.	0/0:3,0:3:6.02:0,6,127	1/1:5,5:10:3.01:47,3,0	0/1:6,0:6:0:0,0,0	./.	1/1:5,3:8:3.01:47,3,0	1/1:3,0:3:3.01:47,3,0	0/0:2,0:2:1.25:0,1,3	./.	0/0:7,0:7:9.02:0,9,144	0/0:3,0:7:12.04:0,12,205	./.	0/1:7,2:9:39.77:84,0,40	1/1:8,10:18:3.85:349,4,0	0/0:19,0:19:33.09:0,33,711	0/0:10,0:10:18.06:0,18,424	./.	0/0:5,0:5:6.02:0,6,141	./.	./.	0/0:4,0:4:3.01:0,3,71	1/1:3,0:12:24.03:222,24,0	1/1:4,3:7:9.03:140,9,0	0/0:15,0:15:6.02:0,6,141	1/1:8,5:13:9.03:140,9,0
chr10	84974849	.	AT	A	3631.11	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.559;DP=603;FS=0.367;HRun=3;HaplotypeScore=72.4939;InbreedingCoeff=0.6864;MQ=76.73;MQ0=0;MQRankSum=-2.372;QD=16.43;ReadPosRankSum=-1.553;VQSLOD=2.8364;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:42:18.09:18,0,308	0/0:16,0:16:42.05:0,42,175	0/0:13,0:13:30.05:0,30,358	0/0:14,0:14:36.10:0,36,452	0/0:32,0:32:96.29:0,96,1334	0/0:21,0:21:60.16:0,60,824	0/0:20,0:20:60.12:0,60,739	0/1:43,0:43:99:110,0,183	1/1:1,19:20:42.13:520,42,0	0/1:21,0:21:60.56:61,0,78	0/0:24,0:24:9.14:0,9,166	0/0:21,0:21:63.19:0,63,865	0/0:24,0:24:72.23:0,72,1019	0/0:12,0:12:36.10:0,36,491	0/0:17,0:17:14.14:0,14,116	0/0:20,0:20:2.63:0,3,131	0/0:23,0:23:15.64:0,16,186	0/0:15,0:15:45.11:0,45,624	1/1:1,14:15:42.05:490,42,0	1/1:1,18:19:47.95:536,48,0	1/1:0,19:19:48.15:594,48,0	1/1:0,19:19:57.09:671,57,0	0/0:25,0:25:75.23:0,75,1043	0/0:24,0:24:72.14:0,72,974	0/0:20,0:20:22:0,22,145	0/0:29,0:29:87.28:0,87,1234	1/1:0,22:22:51.16:631,51,0	0/0:12,0:12:36.12:0,36,515
chr10	84975549	.	G	GTTTA	18136.10	PASS	AB=0.958;AC=33;AF=0.589;AN=56;BaseQRankSum=-12.645;DP=597;FS=4.676;HRun=0;HaplotypeScore=84.0920;InbreedingCoeff=0.9271;MQ=71.80;MQ0=2;MQRankSum=-4.495;QD=46.86;ReadPosRankSum=-0.870;VQSLOD=5.1217;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,27:39:81.28:1944,81,0	1/1:1,8:10:21.07:519,21,0	0/0:16,0:16:24.07:0,24,379	0/0:11,0:11:15.05:0,15,238	0/0:33,0:33:87.29:0,87,1445	0/0:17,0:17:45.15:0,45,758	1/1:4,17:23:42.14:1046,42,0	1/1:8,16:26:60.18:1321,60,0	1/1:4,14:19:42.14:1047,42,0	1/1:4,23:28:72.24:1705,72,0	1/1:4,13:16:33.11:632,33,0	0/0:23,0:23:60.18:0,60,967	0/0:17,0:17:42.12:0,42,685	0/0:17,0:17:51.16:0,51,830	1/1:6,13:19:36.12:879,36,0	1/1:2,11:14:36.12:892,36,0	1/1:6,37:42:90.78:2202,91,0	0/0:19,0:19:54.15:0,54,878	1/1:5,9:15:30.10:693,30,0	1/1:6,21:27:63.21:1380,63,0	1/1:7,17:24:42.14:1047,42,0	1/1:4,15:21:48.16:1043,48,0	0/0:17,0:17:42.11:0,42,650	0/0:29,0:29:69.13:0,69,1078	1/1:4,9:14:21.07:486,21,0	0/1:22,1:23:11.40:11,0,925	1/1:7,17:24:54.18:1288,54,0	0/0:11,0:11:24.08:0,24,407
chr10	84976152	.	TGTGG	T	5435.92	PASS	AB=0.988;AC=22;AF=0.393;AN=56;BaseQRankSum=-0.300;DP=836;FS=14.804;HRun=0;HaplotypeScore=233.4568;InbreedingCoeff=0.2697;MQ=72.52;MQ0=15;MQRankSum=-0.624;QD=11.30;ReadPosRankSum=-5.989;VQSLOD=1.9621;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:29:14.96:39,0,15	0/0:8,0:8:4.01:0,4,26	0/1:82,0:31:38.04:38,0,343	0/0:96,0:44:36.34:0,36,363	0/0:19,0:19:0.27:0,0,520	0/0:26,0:26:4.86:0,5,737	0/0:30,0:30:29.63:0,30,1057	0/1:29,0:29:18.42:18,0,28	1/1:23,3:26:50.68:697,51,0	0/1:29,0:29:17.08:76,0,17	0/1:9,0:9:0.73:7,0,1	0/0:30,0:30:79.07:0,79,1231	0/0:19,0:19:11.20:0,11,731	0/0:22,0:22:59.23:0,59,1009	0/1:16,0:16:5.72:48,0,6	0/1:18,1:19:21.72:22,0,50	0/1:26,2:28:10:92,0,10	0/0:27,0:26:29.09:0,29,1026	1/1:11,11:21:54.16:862,54,0	1/1:19,2:21:38.25:491,38,0	1/1:94,9:101:99:2350,165,0	1/1:16,1:17:20.81:328,21,0	0/0:13,0:13:21.95:0,22,358	0/0:55,0:55:99:0,137,2197	0/1:14,0:14:5.14:36,0,5	0/1:29,0:29:65.56:66,0,849	1/1:5,2:7:17.99:266,18,0	0/0:6,0:6:17.95:0,18,271
chr10	84976154	.	TGG	T	10063.65	PASS	AB=0.983;AC=38;AF=0.679;AN=56;BaseQRankSum=-0.090;DP=834;FS=4.885;HRun=3;HaplotypeScore=192.0111;InbreedingCoeff=0.3693;MQ=69.30;MQ0=15;MQRankSum=-2.671;QD=16.52;ReadPosRankSum=-5.970;VQSLOD=-0.1645;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:15,15:29:51.07:637,51,0	1/1:2,6:8:17.99:245,18,0	0/1:78,1:27:7.91:8,0,302	0/0:95,2:42:24.70:0,25,301	0/1:20,0:20:60.53:61,0,207	0/1:24,1:25:39.98:40,0,319	0/1:29,0:29:33.60:34,0,428	1/1:15,14:29:72.13:1006,72,0	1/1:19,8:27:50.93:694,51,0	1/1:11,18:29:75.14:1010,75,0	1/1:1,8:9:9.03:137,9,0	0/0:29,1:30:10.97:0,11,519	0/0:19,0:19:10.93:0,11,356	0/0:22,0:22:36.07:0,36,462	1/1:6,10:16:45.11:616,45,0	1/1:5,14:19:50.98:655,51,0	1/1:14,15:29:60.09:793,60,0	0/1:27,0:26:17.45:17,0,428	1/1:21,0:20:53.80:552,54,0	1/1:20,1:21:41.75:489,42,0	1/1:98,4:100:99:2045,167,0	1/1:12,6:18:21.76:290,22,0	0/1:12,1:13:43.89:44,0,140	0/0:55,0:55:65.27:0,65,932	1/1:6,8:14:29.92:405,30,0	0/1:29,0:29:85.16:85,0,332	1/1:6,1:7:17.94:197,18,0	0/1:6,0:6:3.01:3,0,104
chr10	84976162	.	TG	T	1782	PASS	AB=0.724;AC=10;AF=0.179;AN=56;BaseQRankSum=8.897;DP=851;FS=18.215;HRun=2;HaplotypeScore=211.3540;InbreedingCoeff=0.6354;MQ=63.86;MQ0=21;MQRankSum=3.500;QD=8.87;ReadPosRankSum=3.259;VQSLOD=-0.4164;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:58.65:0,59,476	0/0:8,0:8:14.74:0,15,98	0/0:78,1:21:11.98:0,12,360	0/0:92,0:32:4.17:0,4,408	0/0:21,0:21:54.18:0,54,761	0/0:22,3:25:65.82:0,66,908	0/0:29,0:29:81.25:0,81,1156	0/0:30,0:30:70.99:0,71,644	1/1:12,15:27:37.62:325,38,0	0/0:28,1:29:73.03:0,73,636	0/0:12,0:12:14.91:0,15,140	0/0:29,0:29:84.25:0,84,1204	0/0:21,0:21:57.19:0,57,828	0/0:23,0:23:62.31:0,62,895	0/0:15,0:15:41.82:0,42,314	0/0:19,0:19:47.09:0,47,362	0/0:32,0:32:57.30:0,57,419	0/0:28,3:30:47.61:0,48,1050	0/1:19,7:22:24.36:152,0,24	1/1:8,12:20:19.77:220,20,0	0/1:49,52:99:7.53:917,0,8	1/1:10,11:21:0.30:238,0,0	0/0:17,0:17:45.11:0,45,604	0/0:56,0:56:99:0,147,2085	0/0:14,0:14:29.35:0,29,214	0/0:29,0:29:46.91:0,47,1056	1/1:3,3:6:5.82:82,6,0	0/0:7,0:7:18.06:0,18,260
chr10	84976191	.	G	GGT	5704.99	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-4.156;DP=852;FS=5.914;HRun=0;HaplotypeScore=188.7745;InbreedingCoeff=0.9798;MQ=62.86;MQ0=24;MQRankSum=-0.721;QD=28.24;ReadPosRankSum=-1.361;VQSLOD=5.3023;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,22:30:30.10:505,30,0	1/1:3,7:10:21.07:352,21,0	0/0:64,0:17:17.47:0,17,326	0/0:85,0:30:6.05:0,6,213	0/0:17,0:16:48.14:0,48,602	0/0:27,0:27:72.16:0,72,909	0/0:27,0:27:63.19:0,63,797	1/1:10,24:34:55.84:1172,56,0	0/0:26,0:26:45.15:0,45,578	1/1:8,19:27:30.63:1055,31,0	1/1:5,9:14:24.08:381,24,0	0/0:32,0:32:81.21:0,81,1006	0/0:21,0:21:45.11:0,45,545	0/0:20,0:20:57.17:0,57,730	1/1:4,8:12:18.06:288,18,0	1/1:4,18:21:42.14:704,42,0	1/1:12,23:37:57.76:807,58,0	0/0:35,0:35:72.22:0,72,1031	0/0:31,0:30:69.17:0,69,849	0/0:16,0:16:42.12:0,42,525	0/0:97,0:98:99:0,168,2079	0/0:23,0:23:50.82:0,51,652	0/0:21,0:21:51.15:0,51,634	0/0:50,0:50:99:0,112,1409	1/1:5,11:16:29.46:441,29,0	0/0:29,0:29:66.20:0,66,834	0/0:12,0:12:36.05:0,36,442	0/0:11,0:11:33.11:0,33,425
chr10	84977535	.	CT	C	4078.48	PASS	AB=0.718;AC=31;AF=0.554;AN=56;BaseQRankSum=6.993;DP=422;FS=3.616;HRun=11;HaplotypeScore=44.7957;InbreedingCoeff=0.7538;MQ=70.93;MQ0=1;MQRankSum=-0.229;QD=15.93;ReadPosRankSum=-0.617;VQSLOD=3.8690;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:22:34.98:276,35,0	1/1:1,5:6:11.98:99,12,0	0/0:10,0:6:8:0,8,67	0/1:18,0:11:21.25:21,0,67	0/0:33,0:34:96.02:0,96,978	0/0:21,0:21:47.61:0,48,500	0/1:3,8:11:13.80:105,0,14	1/1:0,22:23:67.90:539,68,0	1/1:3,13:16:23.95:197,24,0	1/1:2,18:20:53.91:441,54,0	1/1:5,21:26:27.88:429,28,0	0/0:11,0:11:33.06:0,33,338	0/0:5,0:5:12.03:0,12,128	0/0:10,0:10:30.08:0,30,320	1/1:1,5:6:14.98:123,15,0	1/1:1,6:7:17.98:148,18,0	0/1:5,12:19:20.94:240,0,21	0/0:21,0:21:57.14:0,57,603	1/1:7,20:27:56.71:470,57,0	1/1:2,14:16:41.95:345,42,0	1/1:1,7:9:23.01:178,23,0	1/1:1,4:5:8.98:74,9,0	0/0:11,0:13:32.95:0,33,334	0/0:9,0:9:20.99:0,21,210	1/1:4,12:16:23.95:197,24,0	0/0:23,0:23:47.65:0,48,619	1/1:1,8:9:23.97:197,24,0	0/0:9,0:9:17.06:0,17,159
chr10	84978101	.	C	CA	641.44	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.829;DP=526;FS=7.332;HRun=10;HaplotypeScore=56.1431;InbreedingCoeff=0.8133;MQ=67.77;MQ0=3;MQRankSum=0.559;QD=19.44;ReadPosRankSum=0.786;VQSLOD=4.3727;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,102,834	0/0:5,0:5:11.98:0,12,99	0/0:24,0:17:3.23:0,3,109	0/0:23,0:16:13.57:0,14,135	0/0:21,0:21:26.19:0,26,387	0/0:19,0:19:44.93:0,45,369	1/1:5,14:19:38.46:391,38,0	0/0:31,0:32:81.41:0,81,638	0/0:18,0:19:46.92:0,47,374	0/0:18,0:18:47.94:0,48,394	0/0:14,0:14:38.94:0,39,318	0/0:8,0:8:20.81:0,21,160	0/0:8,0:8:20.96:0,21,170	0/0:16,0:16:42.42:0,42,346	0/0:14,0:14:35.93:0,36,292	0/0:16,0:16:38.95:0,39,320	0/0:29,2:31:39.85:0,40,530	0/0:16,0:16:33.50:0,33,273	0/0:20,0:22:54.79:0,55,415	0/0:23,0:24:67.90:0,68,539	0/0:19,0:20:46.97:0,47,375	1/1:2,12:14:25.40:370,25,0	0/0:18,0:18:44.90:0,45,364	0/0:11,0:11:32.96:0,33,271	0/0:14,2:15:38.95:0,39,320	0/0:19,0:19:50.89:0,51,413	0/0:22,0:22:62.92:0,63,517	0/0:15,1:15:2.23:0,2,217
chr10	84978852	.	A	ACT	1992.21	PASS	AB=0.841;AC=8;AF=0.143;AN=56;BaseQRankSum=10.191;DP=1114;FS=6.014;HRun=0;HaplotypeScore=317.0923;InbreedingCoeff=-0.1742;MQ=51.83;MQ0=7;MQRankSum=-7.437;QD=5.31;ReadPosRankSum=-0.627;VQSLOD=2.1766;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,16:42:99:145,0,642	0/0:15,3:18:10.46:0,10,535	0/0:50,0:23:54.11:0,54,741	0/0:56,0:33:81.13:0,81,1087	0/0:37,0:37:99:0,105,1570	0/0:20,0:20:60.20:0,60,968	0/0:32,0:32:96.31:0,96,1516	0/1:59,0:58:99:300,0,1707	0/1:38,18:56:99:611,0,1258	0/1:37,9:45:99:319,0,1375	0/0:20,4:24:5.96:0,6,747	0/0:47,0:47:99:0,136,2060	0/0:31,0:31:84.27:0,84,1336	0/0:48,0:48:99:0,144,2208	0/1:42,14:57:99:333,0,1144	0/1:34,11:45:99:169,0,1166	0/0:25,2:27:16.71:0,17,776	0/0:23,0:23:57.19:0,57,991	0/1:34,2:33:99:146,0,1154	0/0:34,0:34:71.46:0,71,885	0/0:78,3:81:99:0,124,2074	0/0:31,8:39:23.65:0,24,954	0/0:41,0:41:99:0,111,1733	0/0:64,0:64:99:0,177,2724	0/0:18,0:18:53.91:0,54,713	0/0:35,0:35:96.31:0,96,1520	0/1:29,4:34:99:106,0,1031	0/0:14,0:14:42.13:0,42,657
chr10	84978875	.	TAC	T	2276.04	PASS	AB=0.980;AC=14;AF=0.250;AN=56;BaseQRankSum=13.170;DP=1081;FS=5.813;HRun=0;HaplotypeScore=304.8262;InbreedingCoeff=-0.3292;MQ=49.74;MQ0=10;MQRankSum=-7.460;QD=4.01;ReadPosRankSum=2.085;VQSLOD=1.2649;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:42:75.98:76,0,388	0/1:16,0:16:40.01:40,0,126	0/0:41,0:16:39.10:0,39,580	0/0:53,0:23:56.97:0,57,818	0/0:36,0:36:87.28:0,87,1469	0/0:22,0:22:60.19:0,60,1002	0/0:37,0:37:81.26:0,81,1356	0/1:59,0:58:99:211,0,1417	0/1:56,0:56:99:182,0,1069	0/1:58,0:57:99:515,0,1235	0/1:25,0:25:57.28:57,0,398	0/0:47,0:47:99:0,123,1978	0/0:30,0:30:84.29:0,84,1425	0/0:47,0:47:99:0,129,2175	0/1:53,0:53:99:237,0,481	0/1:43,0:43:99:266,0,519	0/1:21,0:21:25.57:26,0,324	0/0:25,0:25:66.66:0,67,1048	0/1:42,0:39:99:367,0,692	0/0:29,0:29:15.03:0,15,259	0/1:78,0:78:76.08:76,0,974	0/1:35,0:35:58.35:58,0,307	0/0:42,0:42:99:0,108,1822	0/0:55,0:55:99:0,123,1935	0/1:6,4:10:14.83:58,0,15	0/0:34,0:34:90.28:0,90,1500	0/1:29,0:29:99:263,0,476	0/0:16,0:16:48.16:0,48,825
chr10	84978881	.	CACAT	C	5241.91	PASS	AB=0.794;AC=15;AF=0.268;AN=56;BaseQRankSum=13.369;DP=1069;FS=6.753;HRun=0;HaplotypeScore=323.5732;InbreedingCoeff=-0.2212;MQ=49.44;MQ0=10;MQRankSum=-10.047;QD=9.13;ReadPosRankSum=-0.668;VQSLOD=2.5976;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,4:42:99:214,0,542	0/1:7,8:15:99:108,0,153	0/0:43,0:15:42.13:0,42,950	0/0:51,0:23:66.16:0,66,1382	0/0:34,0:34:96.25:0,96,2459	0/0:21,0:21:60.19:0,60,1605	0/0:32,0:32:77.87:0,78,2294	0/1:51,6:55:99:376,0,2432	0/1:42,17:59:99:566,0,1595	0/1:41,19:59:99:1017,0,2170	0/1:20,5:25:99:102,0,726	0/0:45,0:45:99:0,129,3321	0/0:30,0:30:87.28:0,87,2323	0/0:46,0:46:99:0,138,3649	0/1:33,23:56:99:537,0,926	0/1:35,13:48:99:634,0,1040	0/1:19,3:22:77.84:78,0,618	0/0:25,0:25:56.07:0,56,1688	0/1:21,17:35:99:768,0,1220	0/0:17,12:29:21.02:0,21,481	0/1:75,2:77:99:117,0,1780	0/1:22,13:35:99:123,0,632	0/0:42,0:42:99:0,114,3035	0/0:50,0:50:99:0,132,3217	1/1:9,1:10:4.56:115,5,0	0/0:31,0:31:90.31:0,90,2396	0/1:18,12:30:99:489,0,909	0/0:16,0:16:48.16:0,48,1326
chr10	84978894	.	ACC	A	1034.06	PASS	AB=0.808;AC=9;AF=0.167;AN=54;BaseQRankSum=11.593;DP=1045;FS=1.683;HRun=3;HaplotypeScore=283.4838;InbreedingCoeff=-0.2001;MQ=50.37;MQ0=7;MQRankSum=-11.653;QD=2.87;ReadPosRankSum=0.786;VQSLOD=-0.7242;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,4:39:28.87:0,29,586	0/1:8,6:14:70.97:71,0,140	0/0:43,0:15:41.80:0,42,631	0/0:37,0:18:48.13:0,48,755	0/0:40,0:40:99:0,111,1847	0/0:21,0:21:57.13:0,57,999	0/0:34,0:35:77.90:0,78,1628	0/0:50,0:47:99:0,120,2079	0/1:50,10:60:99:227,0,1442	0/1:50,11:60:99:236,0,2096	0/0:20,4:24:43.82:0,44,724	0/0:47,0:47:99:0,129,2294	0/0:29,0:29:84.13:0,84,1563	0/0:46,0:46:99:0,138,2525	0/1:34,18:52:99:181,0,917	0/1:41,12:53:99:158,0,1316	0/1:19,2:21:38.64:39,0,536	0/0:22,0:22:43.55:0,44,1031	0/1:28,6:34:99:162,0,884	0/0:25,7:32:25.03:0,25,556	0/0:73,0:74:99:0,102,1731	0/1:24,11:35:37.66:38,0,631	0/0:42,0:42:99:0,126,2174	0/0:43,0:43:99:0,108,1928	./.	0/0:34,0:35:99:0,99,1735	0/1:22,8:29:63.22:63,0,858	0/0:18,0:18:48.14:0,48,870
chr10	84979399	.	TA	T	1868.32	PASS	AC=18;AF=0.333;AN=54;BaseQRankSum=1.647;DP=224;FS=6.529;HRun=8;HaplotypeScore=35.7551;InbreedingCoeff=0.7356;MQ=63.79;MQ0=0;MQRankSum=-2.581;QD=21.72;ReadPosRankSum=-1.224;VQSLOD=2.8001;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,8:13:31.55:283,32,0	1/1:0,1:1:3:29,3,0	0/0:3,0:3:5.81:0,6,49	0/0:18,0:6:4.39:0,4,41	0/0:7,0:7:21.05:0,21,240	0/0:12,0:12:27.08:0,27,326	0/0:4,0:4:9.03:0,9,109	1/1:5,23:27:78.07:731,78,0	0/0:3,0:3:8.85:0,9,62	1/1:0,6:7:5.81:159,6,0	1/1:1,1:2:6.01:58,6,0	0/0:1,0:1:3.01:0,3,36	0/0:2,0:3:6.02:0,6,72	0/0:5,0:5:9.03:0,9,107	1/1:0,5:5:9.01:87,9,0	1/1:0,1:1:3:29,3,0	1/1:4,11:16:18.79:301,19,0	0/0:28,0:27:68.66:0,69,786	0/0:12,0:12:22.51:0,23,124	0/0:8,0:8:23.41:0,23,143	0/0:1,0:1:2.98:0,3,21	./.	0/0:3,0:3:9.03:0,9,109	0/0:2,0:2:6.02:0,6,72	1/1:1,12:13:39.06:376,39,0	0/0:6,0:6:15.05:0,15,181	0/0:10,0:10:26.57:0,27,174	0/0:10,0:10:30.09:0,30,362
chr10	84979428	.	CT	C	1046.17	PASS	AB=0.831;AC=19;AF=0.352;AN=54;BaseQRankSum=0.979;DP=255;FS=6.771;HRun=13;HaplotypeScore=41.5353;InbreedingCoeff=0.5285;MQ=65.50;MQ0=8;MQRankSum=-0.675;QD=7.64;ReadPosRankSum=0.208;VQSLOD=1.4698;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:7,4:14:5.15:103,0,5	1/1:1,4:5:11.93:88,12,0	0/0:8,0:6:8.81:0,9,71	0/1:10,0:7:0.12:0,0,32	0/1:8,1:9:0.89:1,0,149	0/0:12,1:11:8.13:0,8,231	1/1:2,5:6:14.91:109,15,0	0/1:17,6:23:10.28:164,0,10	0/0:4,0:4:11.56:0,12,64	1/1:1,7:7:20.88:153,21,0	1/1:2,7:8:17.84:129,18,0	0/0:2,0:1:0:0,0,0	./.	0/0:3,0:3:3:0,3,29	1/1:3,2:5:8.93:64,9,0	0/0:2,0:2:2.68:0,3,11	1/1:7,12:19:16.30:221,16,0	0/0:24,1:25:20.81:0,21,367	0/0:12,0:12:23.19:0,23,135	0/0:11,0:11:23.09:0,23,123	0/0:4,0:4:5.92:0,6,40	0/0:1,0:1:2.88:0,3,15	0/0:6,1:6:12.02:0,12,117	0/0:4,0:4:9.01:0,9,88	1/1:5,8:14:22.85:159,23,0	0/0:9,0:9:20.92:0,21,181	0/0:10,0:10:26.22:0,26,154	0/1:9,3:12:32.84:33,0,186
chr10	84979572	.	CTG	C	801.29	PASS	AB=0.966;AC=19;AF=0.365;AN=52;BaseQRankSum=3.046;DP=458;FS=12.836;HRun=0;HaplotypeScore=91.2339;InbreedingCoeff=0.0850;MQ=58.93;MQ0=17;MQRankSum=-0.802;QD=3.85;ReadPosRankSum=-0.162;VQSLOD=1.5565;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:4.79:0,5,28	./.	0/0:36,0:17:3.01:0,3,41	./.	0/0:17,0:16:1.94:0,2,43	0/1:15,1:16:24.49:24,0,136	0/0:17,1:25:18:0,18,182	0/0:28,0:25:3.45:0,3,23	0/1:9,3:11:9.86:89,0,10	0/1:10,0:9:13.83:29,0,14	0/0:8,0:8:0:0,0,0	0/1:10,0:10:18.72:19,0,140	0/1:9,0:8:32.16:36,0,32	0/0:8,0:8:21.02:0,21,289	0/1:19,0:19:19.95:20,0,61	0/0:10,0:10:2.98:0,3,22	0/0:23,0:22:14.69:0,15,102	0/1:16,0:16:43.51:44,0,207	1/1:10,5:16:13.73:165,14,0	1/1:5,4:9:5.98:66,6,0	1/1:11,12:23:15.04:166,15,0	0/0:14,0:13:18.47:0,18,157	0/1:10,0:10:19.27:19,0,96	0/1:29,0:29:12.54:13,0,400	0/0:10,0:10:0:0,0,0	1/1:6,10:16:21.48:204,21,0	1/1:5,6:11:5.30:65,5,0	0/0:13,0:13:23.37:0,23,320
chr10	84979602	.	G	GTGTGTGTA	1203.49	PASS	AB=1.000;AC=16;AF=0.296;AN=54;BaseQRankSum=-3.523;DP=479;FS=13.333;HRun=0;HaplotypeScore=129.5795;InbreedingCoeff=0.3429;MQ=48.88;MQ0=23;MQRankSum=-0.641;QD=7.00;ReadPosRankSum=-2.053;VQSLOD=1.5834;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:34:13.91:148,0,14	1/1:4,0:4:5.99:50,6,0	0/0:29,0:9:20.08:0,20,204	0/0:34,0:10:12:0,12,114	0/0:16,0:16:9.09:0,9,122	0/0:18,0:17:27.52:0,28,343	0/0:23,0:23:11:0,11,303	0/1:14,0:11:50.80:60,0,51	0/0:16,0:15:25.44:0,25,375	1/1:4,9:14:18.77:237,19,0	./.	0/1:13,0:13:6.62:7,0,219	0/0:8,0:7:15.16:0,15,148	0/0:12,0:12:27.06:0,27,556	1/1:18,0:18:22.81:219,23,0	1/1:1,8:13:2.73:129,3,0	1/1:9,10:21:4.95:410,5,0	0/0:18,0:18:17.68:0,18,482	0/1:16,0:13:23.25:23,0,187	0/1:6,0:6:23.80:24,0,33	0/0:25,0:24:20.88:0,21,334	0/0:15,0:14:24.49:0,24,293	0/0:11,0:11:15.03:0,15,211	0/0:31,0:31:40.80:0,41,964	0/1:15,0:15:12.90:64,0,13	0/0:14,0:14:0.07:0,0,278	0/0:16,0:16:27.86:0,28,288	0/0:11,0:11:23.37:0,23,492
chr10	84980438	.	A	AT	1985.62	PASS	AB=0.955;AC=16;AF=0.286;AN=56;BaseQRankSum=-4.733;DP=565;FS=15.893;HRun=12;HaplotypeScore=68.5596;InbreedingCoeff=0.8290;MQ=75.89;MQ0=0;MQRankSum=0.740;QD=12.03;ReadPosRankSum=-0.887;VQSLOD=1.4725;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,2:34:16.12:0,16,442	0/1:9,1:10:11.33:11,0,92	0/1:16,0:15:5.86:6,0,59	0/0:12,0:12:9.69:0,10,55	0/0:34,0:35:76.55:0,77,553	0/0:24,0:26:58.95:0,59,424	0/0:19,0:20:49.63:0,50,347	0/0:25,1:26:18.41:0,18,293	1/1:2,12:14:20.65:204,21,0	0/0:28,1:29:56.55:0,57,416	0/0:19,0:19:38.32:0,38,357	0/0:16,0:16:35.72:0,36,259	0/0:14,0:15:31.82:0,32,225	0/0:15,0:15:41.75:0,42,306	0/0:28,1:29:42.36:0,42,474	0/0:17,1:18:41.71:0,42,306	0/0:21,0:22:46.71:0,47,334	0/0:17,0:17:41.75:0,42,306	1/1:10,13:23:16.20:295,16,0	1/1:6,19:28:38.04:461,38,0	1/1:7,5:12:20.72:193,21,0	1/1:4,1:23:43.67:220,44,0	0/0:20,0:20:38.75:0,39,284	0/0:11,0:13:31.87:0,32,225	1/1:5,11:17:36.73:327,37,0	0/0:25,1:26:27.47:0,27,365	1/1:2,20:22:48.55:467,49,0	0/0:6,0:7:13.94:0,14,91
chr10	84981858	.	A	AGG	3038.08	PASS	AB=0.837;AC=51;AF=0.944;AN=54;BaseQRankSum=-5.461;DP=383;FS=4.472;HRun=8;HaplotypeScore=81.0330;InbreedingCoeff=0.3037;MQ=90.43;MQ0=7;MQRankSum=-2.966;QD=8.83;ReadPosRankSum=3.322;VQSLOD=0.0828;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:35:49.91:172,50,0	1/1:3,0:2:3.01:48,3,0	0/1:29,0:27:4.14:4,0,152	0/0:33,0:26:6.40:0,6,250	1/1:2,0:8:7.79:30,8,0	1/1:0,1:11:0.60:22,1,0	1/1:6,8:16:29.09:394,29,0	1/1:10,0:16:12.42:54,12,0	1/1:5,11:16:21.03:306,21,0	1/1:2,5:7:15.03:214,15,0	1/1:5,7:12:11.78:181,12,0	1/1:3,0:7:7.01:24,7,0	1/1:5,0:14:20.22:76,20,0	1/1:8,0:20:26.91:135,27,0	1/1:7,5:12:12:154,12,0	1/1:3,10:15:15.05:238,15,0	1/1:5,12:17:30.10:468,30,0	1/1:2,0:12:17.47:60,17,0	1/1:3,0:5:6.01:66,6,0	./.	1/1:5,1:8:12.03:168,12,0	1/1:11,0:11:3.01:32,3,0	1/1:2,0:6:7.95:37,8,0	1/1:4,0:20:33.40:136,33,0	1/1:6,0:13:17.47:61,17,0	1/1:6,0:10:9.52:32,10,0	1/1:2,1:5:3:26,3,0	1/1:1,0:3:2.37:8,2,0
chr10	84982553	.	TTGTC	T	1604.47	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.673;DP=467;FS=10.559;HRun=0;HaplotypeScore=76.0751;InbreedingCoeff=0.9196;MQ=81.83;MQ0=0;MQRankSum=-5.123;QD=37.31;ReadPosRankSum=1.847;VQSLOD=3.0379;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:69.23:1229,69,0	0/0:4,0:4:12.04:0,12,281	0/0:14,0:15:41.88:0,42,931	0/0:15,0:15:8.02:0,8,712	0/0:15,0:15:45.15:0,45,1156	0/0:9,0:9:24.06:0,24,576	0/0:20,0:20:57.20:0,57,1458	1/1:4,9:13:27.09:496,27,0	0/0:20,0:20:48.16:0,48,1253	0/0:13,0:13:39.13:0,39,1019	0/0:3,0:3:9.03:0,9,238	0/0:16,0:16:48.16:0,48,1219	0/0:15,0:15:39.13:0,39,990	0/0:10,0:10:27.09:0,27,697	0/0:12,0:12:36.12:0,36,940	0/0:10,0:10:30.10:0,30,786	0/0:39,0:39:99:0,105,2628	0/0:31,0:31:78.27:0,78,1998	0/0:16,0:16:42.13:0,42,965	0/0:11,0:11:33.11:0,33,860	0/0:16,0:16:45.14:0,45,1094	0/0:19,0:19:48.16:0,48,1224	0/0:9,0:9:27.09:0,27,692	0/0:31,0:31:78.27:0,78,2023	0/0:10,0:10:27.09:0,27,713	0/0:26,0:26:69.24:0,69,1778	0/0:18,0:18:54.19:0,54,1394	0/0:21,0:21:51.16:0,51,1291
chr10	84982631	.	AATCTCT	A	292.82	PASS	AB=0.952;AC=12;AF=0.214;AN=56;BaseQRankSum=6.142;DP=434;FS=2.291;HRun=0;HaplotypeScore=90.3294;InbreedingCoeff=-0.2864;MQ=69.21;MQ0=20;MQRankSum=0.586;QD=1.62;ReadPosRankSum=4.729;VQSLOD=1.0384;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:11.85:12,0,186	0/1:7,0:7:54.86:55,0,67	0/0:26,0:13:30.41:0,30,331	0/0:37,0:18:41.20:0,41,456	0/0:8,0:8:20.63:0,21,157	0/0:17,0:17:44.61:0,45,467	0/0:23,0:21:16.84:0,17,214	0/0:18,0:16:36.01:0,36,323	0/0:15,0:15:17.42:0,17,320	0/0:16,0:16:44.01:0,44,365	0/1:8,0:9:19.43:19,0,59	0/1:15,0:15:13.32:13,0,198	0/0:8,0:11:12.96:0,13,167	0/1:14,0:14:19.59:20,0,174	0/0:13,0:13:24:0,24,211	0/1:5,0:5:45.63:46,0,68	0/1:15,18:32:19:19,0,212	0/1:22,0:21:70.56:71,0,198	0/1:13,0:13:26.55:27,0,132	0/0:6,0:6:3.94:0,4,64	0/1:13,0:14:30.87:31,0,158	0/0:13,0:12:26.83:0,27,253	0/0:7,0:7:17.92:0,18,141	0/1:28,0:25:90.84:91,0,240	0/0:10,0:10:20.77:0,21,157	0/0:17,0:17:6.07:0,6,297	0/1:6,0:6:39.45:39,0,87	0/0:14,0:14:41.05:0,41,305
chr10	84982632	.	ATCTCTC	A	1460.73	PASS	AB=0.971;AC=30;AF=0.750;AN=40;BaseQRankSum=-0.284;DP=437;FS=0.000;HRun=0;HaplotypeScore=88.1388;InbreedingCoeff=0.2356;MQ=66.61;MQ0=22;MQRankSum=2.096;QD=5.89;ReadPosRankSum=1.555;VQSLOD=1.2843;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:14:6.02:101,6,0	1/1:7,0:7:9.03:155,9,0	./.	./.	./.	0/0:19,0:19:9.02:0,9,150	0/0:13,10:21:0:0,0,0	1/1:14,0:16:0.47:1,0,0	0/1:15,0:16:15.62:32,0,16	0/0:16,0:16:0.47:0,0,1	1/1:9,0:9:5.95:77,6,0	1/1:16,0:16:8.26:85,8,0	0/0:13,0:11:2.99:0,3,24	1/1:14,0:14:17.88:191,18,0	./.	1/1:5,0:5:5.50:115,6,0	1/1:32,0:31:3.01:48,3,0	1/1:14,0:21:2.11:104,2,0	1/1:11,0:14:2.97:50,3,0	./.	0/1:14,0:14:48.08:89,0,48	./.	./.	1/1:29,0:26:31.48:370,31,0	./.	1/1:13,3:15:6:84,6,0	1/1:7,0:6:3.01:52,3,0	1/1:14,0:14:2.97:20,3,0
chr10	84983382	.	CG	C	1641.38	PASS	AB=1.000;AC=17;AF=0.340;AN=50;BaseQRankSum=4.313;DP=213;FS=20.529;HRun=8;HaplotypeScore=44.5807;InbreedingCoeff=0.6273;MQ=81.16;MQ0=1;MQRankSum=-3.313;QD=14.79;ReadPosRankSum=5.368;VQSLOD=1.7919;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:26:24.89:71,25,0	1/1:2,2:4:12.01:112,12,0	0/0:9,0:7:6.02:0,6,67	0/0:8,0:6:3.01:0,3,36	0/0:4,0:4:3.01:0,3,36	0/0:1,0:1:3.01:0,3,36	0/0:10,0:10:24.06:0,24,277	1/1:4,0:9:6.08:17,6,0	0/1:5,0:5:10.20:10,0,22	1/1:1,10:11:30.03:278,30,0	1/1:1,3:4:6.01:57,6,0	0/0:9,0:9:17.95:0,18,186	0/0:4,0:4:8.84:0,9,74	0/0:7,0:7:15.02:0,15,160	1/1:2,12:14:36.04:340,36,0	1/1:1,11:12:33.04:313,33,0	1/1:5,21:26:66.07:619,66,0	0/0:6,0:6:12:0,12,120	0/0:4,0:4:2.92:0,3,17	./.	0/0:6,0:6:5.67:0,6,36	./.	0/0:1,0:1:3.01:0,3,36	0/0:8,0:8:17.99:0,18,178	0/0:9,0:8:3.48:0,3,37	0/0:4,0:4:3:0,3,26	0/0:5,0:5:9.30:0,9,43	./.
chr10	84983391	.	AGGG	A	3110.80	PASS	AB=1.000;AC=25;AF=0.463;AN=54;BaseQRankSum=3.135;DP=205;FS=5.751;HRun=10;HaplotypeScore=46.0740;InbreedingCoeff=0.5244;MQ=77.92;MQ0=1;MQRankSum=-1.930;QD=22.54;ReadPosRankSum=4.077;VQSLOD=0.8723;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,12:22:42.02:492,42,0	1/1:6,2:8:18.05:238,18,0	0/0:11,0:8:6.75:0,7,93	0/0:5,0:3:3:0,3,27	0/0:4,0:4:6.02:0,6,113	0/0:1,0:1:3.01:0,3,62	0/0:9,0:9:15.04:0,15,231	1/1:7,3:10:8.87:116,9,0	0/1:5,0:5:11.43:29,0,11	1/1:5,7:12:30.09:389,30,0	1/1:1,2:3:6.02:80,6,0	0/0:9,0:9:17.44:0,17,193	0/0:5,0:5:9:0,9,120	0/0:5,0:5:9.03:0,9,187	1/1:6,9:15:41.85:464,42,0	1/1:4,9:13:39.09:502,39,0	1/1:11,16:27:71.67:841,72,0	0/0:5,0:5:12.01:0,12,157	0/1:4,0:4:4.43:22,0,4	1/1:3,2:5:4.25:38,4,0	0/0:3,0:3:2.22:0,2,7	1/1:2,0:2:2.92:17,3,0	0/0:1,0:1:3.01:0,3,62	0/0:6,0:6:12.03:0,12,202	1/1:0,6:5:1.12:10,1,0	0/0:3,0:3:3.01:0,3,54	0/1:6,0:6:16.15:52,0,16	./.
chr10	84983753	.	AAC	A	2306.86	PASS	AB=0.863;AC=11;AF=0.196;AN=56;BaseQRankSum=8.087;DP=591;FS=0.461;HRun=0;HaplotypeScore=105.0691;InbreedingCoeff=0.7154;MQ=71.58;MQ0=10;MQRankSum=-8.034;QD=19.06;ReadPosRankSum=-4.208;VQSLOD=2.6215;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:79.16:0,79,1656	1/1:2,9:10:17.96:191,18,0	0/0:35,0:24:58.32:0,58,818	0/0:48,0:25:34.03:0,34,540	0/0:22,0:22:60.21:0,60,1098	0/0:18,0:18:51.14:0,51,858	0/0:21,0:21:63.20:0,63,1105	0/0:30,0:30:50.77:0,51,1143	0/0:17,0:17:29.41:0,29,602	1/1:18,6:24:41.28:668,41,0	1/1:1,16:16:42.05:538,42,0	0/0:17,0:17:45.08:0,45,714	0/0:10,0:10:30.10:0,30,515	0/0:17,0:17:44.33:0,44,697	0/1:7,4:9:11.64:157,0,12	0/1:15,3:17:3.25:319,0,3	1/1:17,10:24:38.36:594,38,0	0/0:38,0:38:99:0,113,1913	0/0:17,0:17:45.14:0,45,763	0/0:17,0:17:50.94:0,51,839	0/0:15,0:15:39.12:0,39,649	0/0:25,0:25:66.14:0,66,1136	0/0:14,0:14:42.10:0,42,695	0/0:14,0:14:39.13:0,39,691	0/1:13,0:12:11.52:12,0,223	0/0:22,0:21:60.15:0,60,1022	0/0:20,0:20:41.15:0,41,667	0/0:18,0:18:51.08:0,51,813
chr10	84983765	.	C	CA	2547.51	PASS	AB=0.964;AC=34;AF=0.607;AN=56;BaseQRankSum=5.711;DP=611;FS=0.406;HRun=12;HaplotypeScore=102.7273;InbreedingCoeff=0.4905;MQ=62.45;MQ0=9;MQRankSum=-0.943;QD=6.02;ReadPosRankSum=-3.698;VQSLOD=1.7320;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,2:39:62.55:400,63,0	1/1:8,0:7:9.12:38,9,0	0/1:30,0:20:40.62:48,0,41	0/1:40,0:18:1.43:1,0,14	0/0:21,0:23:24.99:0,25,344	0/1:13,2:17:18.50:19,0,191	0/0:21,0:24:61.97:0,62,416	1/1:20,1:38:31.40:265,31,0	1/1:9,7:17:19.20:362,19,0	1/1:18,0:18:25.80:126,26,0	1/1:17,0:16:14.05:51,14,0	0/0:20,0:20:9.69:0,10,180	0/0:16,0:16:6.07:0,6,210	0/0:18,0:18:9.17:0,9,162	1/1:13,0:11:5.06:18,5,0	1/1:12,0:11:0.60:45,1,0	1/1:25,0:22:16.48:52,16,0	0/0:35,1:38:4.32:0,4,376	1/1:12,4:17:21.27:195,21,0	1/1:8,13:21:14.17:279,14,0	1/1:6,14:20:12.04:271,12,0	1/1:5,2:24:40.92:245,41,0	0/1:15,1:16:13.68:14,0,182	0/1:16,1:18:19:19,0,185	0/1:13,0:12:1.40:28,0,1	0/0:22,2:23:13.33:0,13,256	1/1:3,17:20:27.04:263,27,0	0/0:22,3:25:13.24:0,13,420
chr10	84984673	.	A	AAC	394.33	PASS	AB=1.000;AC=17;AF=0.472;AN=36;BaseQRankSum=-3.554;DP=446;FS=0.000;HRun=0;HaplotypeScore=78.6397;InbreedingCoeff=0.3491;MQ=78.13;MQ0=12;MQRankSum=1.933;QD=2.80;ReadPosRankSum=-1.559;VQSLOD=1.5624;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:5.35:0,5,30	./.	./.	./.	0/1:12,0:13:8.10:20,0,8	1/1:13,0:13:12.04:168,12,0	./.	./.	0/1:3,0:4:8.08:23,0,8	0/0:15,0:15:1.96:0,2,8	./.	1/1:11,1:12:3.01:43,3,0	0/1:10,0:10:0:0,0,0	1/1:9,0:9:2.99:24,3,0	0/0:10,0:11:2.84:0,3,14	./.	0/0:22,0:26:5.49:0,5,28	0/0:19,0:18:3:0,3,31	1/1:15,0:15:0.47:1,0,0	0/0:4,0:6:5.68:0,6,28	./.	./.	./.	1/1:29,7:38:9.03:130,9,0	0/0:6,0:8:5.67:0,6,28	1/1:19,0:18:10.79:79,11,0	0/0:12,0:13:2.84:0,3,14	1/1:3,3:8:3:26,3,0
chr10	84985164	.	A	AAAAAAAAAAG	12413.50	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=7.201;DP=567;FS=12.170;HRun=0;HaplotypeScore=168.4252;InbreedingCoeff=0.9823;MQ=71.24;MQ0=1;MQRankSum=-13.736;QD=53.97;ReadPosRankSum=-5.917;VQSLOD=2.3717;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,3050	1/1:3,0:11:18.06:551,18,0	0/0:19,0:18:39.62:0,40,753	0/0:7,0:6:8.15:0,8,185	0/0:21,0:21:61.71:0,62,1494	0/0:18,0:18:54.12:0,54,1412	0/0:28,0:28:81.14:0,81,1961	0/0:36,0:36:96.16:0,96,2248	1/1:8,0:24:30.10:975,30,0	1/1:10,0:24:60.16:1657,60,0	1/1:7,1:22:36.12:1125,36,0	0/0:30,0:30:90.26:0,90,2159	0/0:15,0:15:42.02:0,42,996	0/0:31,0:31:84.14:0,84,2092	1/1:6,0:15:21.07:672,21,0	1/1:3,0:13:21.07:771,21,0	1/1:9,0:23:27.09:926,27,0	0/0:19,0:19:54.15:0,54,1357	1/1:10,0:24:66.10:2193,66,0	1/1:5,0:17:21.06:691,21,0	1/1:4,0:9:12.04:368,12,0	1/1:4,0:10:24.04:716,24,0	0/0:13,0:13:36.02:0,36,905	0/0:23,0:23:69.23:0,69,1784	1/1:6,0:14:21.07:697,21,0	0/0:17,0:16:48.13:0,48,1189	1/1:8,0:23:30.10:1071,30,0	0/0:19,0:19:57.20:0,57,1539
chr10	84985614	.	A	ACC	3096.54	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=8.103;DP=500;FS=3.340;HRun=7;HaplotypeScore=75.9698;InbreedingCoeff=0.8658;MQ=70.35;MQ0=4;MQRankSum=-2.400;QD=11.86;ReadPosRankSum=0.034;VQSLOD=0.2068;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:19:9.02:95,9,0	1/1:3,3:6:15.04:202,15,0	0/0:56,0:27:42.42:0,42,485	0/1:36,0:23:3.84:4,0,359	0/0:23,0:22:57.02:0,57,643	0/0:19,0:19:54.14:0,54,615	1/1:5,15:20:37.01:575,37,0	1/1:18,0:19:10.24:83,10,0	1/1:9,0:9:21.06:230,21,0	1/1:15,0:16:23.59:245,24,0	1/1:7,0:7:21.06:258,21,0	0/0:17,0:17:45.08:0,45,489	0/0:15,0:15:39.11:0,39,452	0/0:22,0:22:57.15:0,57,650	1/1:15,0:16:32.57:335,33,0	1/1:14,1:15:27.06:292,27,0	1/1:24,0:24:39.10:417,39,0	0/0:19,0:19:57.17:0,57,662	1/1:10,0:10:5.81:55,6,0	1/1:8,0:8:6.02:67,6,0	1/1:7,1:8:2.59:47,3,0	1/1:12,0:13:23.99:224,24,0	0/0:21,0:21:63.17:0,63,723	0/0:18,0:18:51.14:0,51,581	1/1:2,1:20:24.95:88,25,0	0/0:22,0:22:60.17:0,60,690	1/1:6,0:14:9.02:99,9,0	0/0:7,0:7:21.06:0,21,243
chr10	84985621	.	C	CCT	4161.78	PASS	AB=0.969;AC=28;AF=0.500;AN=56;BaseQRankSum=3.589;DP=492;FS=5.195;HRun=0;HaplotypeScore=74.2250;InbreedingCoeff=0.7216;MQ=72.96;MQ0=4;MQRankSum=-2.150;QD=19.18;ReadPosRankSum=-0.291;VQSLOD=2.9380;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,4:21:8.97:91,9,0	1/1:3,5:8:15.05:232,15,0	0/0:51,0:28:53.51:0,54,562	0/0:32,0:20:25.65:0,26,364	0/0:22,0:22:60.46:0,60,841	0/0:21,0:21:59.74:0,60,758	1/1:14,0:14:35.79:275,36,0	1/1:4,0:13:10.83:174,11,0	1/1:0,9:10:21.07:393,21,0	1/1:1,13:16:44.96:559,45,0	1/1:1,11:12:24.04:410,24,0	0/0:16,0:17:47.57:0,48,606	0/0:14,0:14:42.05:0,42,554	0/0:21,0:21:62.99:0,63,793	1/1:1,17:19:32.70:578,33,0	1/1:1,13:15:27.09:500,27,0	1/1:0,21:22:39.13:740,39,0	0/0:20,0:20:60.09:0,60,796	0/1:12,0:12:5.28:5,0,132	0/1:6,0:6:14.37:21,0,14	0/1:6,0:7:12.04:23,0,12	1/1:11,0:11:15.08:57,15,0	0/0:21,0:21:63.19:0,63,908	0/0:19,0:19:54.09:0,54,710	1/1:21,0:21:13.37:87,13,0	0/0:23,0:23:63.12:0,63,835	0/1:9,0:9:11.18:17,0,11	0/0:8,0:8:21.07:0,21,310
chr10	84988687	.	GTGTGGAGT	G	862.22	PASS	AB=1.000;AC=22;AF=0.440;AN=50;BaseQRankSum=0.324;DP=233;FS=40.932;HRun=0;HaplotypeScore=42.5713;InbreedingCoeff=0.2273;MQ=41.42;MQ0=21;MQRankSum=-4.194;QD=8.80;ReadPosRankSum=2.306;VQSLOD=0.4896;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:0.07:0,0,1	./.	0/0:26,0:1:3.01:0,3,81	0/0:26,0:4:8.79:0,9,102	0/0:5,0:5:0:0,0,0	1/1:11,0:11:5.71:92,6,0	1/1:8,0:8:3.01:57,3,0	1/1:0,5:5:15.05:392,15,0	0/1:5,0:4:6.41:6,0,69	0/1:6,0:6:46.89:114,0,47	0/0:6,0:6:6:0,6,57	0/1:7,0:6:5.70:6,0,40	0/1:6,0:6:7.23:7,0,15	0/0:14,0:14:3.89:0,4,29	0/0:8,0:8:2.22:0,2,49	0/0:7,0:6:7.26:0,7,83	1/1:8,0:8:3.54:18,4,0	1/1:5,0:4:1.55:4,2,0	1/1:4,0:3:2.70:39,3,0	0/0:9,0:9:9.03:0,9,129	./.	0/0:9,0:9:0.47:0,0,1	./.	0/0:10,0:10:3:0,3,27	1/1:4,0:4:2.80:13,3,0	0/1:12,0:12:99:139,0,192	1/1:5,0:5:7.61:114,8,0	0/0:2,0:2:5.95:0,6,42
chr10	84988690	.	TG	T	512.60	PASS	AB=1.000;AC=38;AF=0.826;AN=46;BaseQRankSum=-1.688;DP=215;FS=5.400;HRun=2;HaplotypeScore=34.5403;InbreedingCoeff=0.2743;MQ=41.64;MQ0=20;MQRankSum=-0.134;QD=3.77;ReadPosRankSum=3.242;VQSLOD=0.6052;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:0.22:0,0,0	./.	0/0:24,0:1:3.01:0,3,37	0/0:25,0:4:3.95:0,4,40	./.	1/1:9,1:10:6.36:37,6,0	1/1:8,0:8:2.97:20,3,0	1/1:6,0:6:16.62:86,17,0	1/1:5,0:4:2.99:23,3,0	1/1:5,0:5:11.72:76,12,0	1/1:5,0:5:2.92:17,3,0	1/1:6,1:6:8.54:50,9,0	1/1:6,0:6:2.80:13,3,0	1/1:13,0:13:1.24:3,1,0	1/1:7,0:7:0.47:1,0,0	1/1:6,1:6:4.40:21,4,0	1/1:8,0:8:6.22:33,6,0	1/1:5,0:4:2.98:21,3,0	1/1:4,0:3:2.99:23,3,0	./.	./.	0/0:7,0:7:0:0,0,0	./.	1/1:8,0:8:1.25:3,1,0	1/1:3,0:3:2.68:11,3,0	0/1:11,0:11:4.47:76,0,4	1/1:5,0:5:11.82:77,12,0	1/1:1,0:1:2.99:23,3,0
chr10	84988691	.	G	GA	713.93	PASS	AB=0.806;AC=38;AF=0.792;AN=48;BaseQRankSum=-2.381;DP=194;FS=14.939;HRun=0;HaplotypeScore=32.4016;InbreedingCoeff=0.3469;MQ=42.53;MQ0=20;MQRankSum=-1.191;QD=5.80;ReadPosRankSum=0.803;VQSLOD=1.5322;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:4,5:11:0:1,0,0	./.	0/0:24,0:1:3.01:0,3,42	0/0:25,0:4:3.95:0,4,43	0/1:0,0:4:0:0,0,0	1/1:4,3:9:6.45:54,6,0	1/1:1,6:8:2.97:20,3,0	1/1:6,0:6:16.58:116,17,0	1/1:2,2:4:2.99:23,3,0	1/1:1,2:5:11.94:113,12,0	0/0:1,2:4:1.55:0,2,4	1/1:4,1:5:8.67:52,9,0	1/1:1,4:5:2.80:13,3,0	1/1:0,0:12:2.99:23,3,0	1/1:4,1:7:0.47:1,0,0	0/0:2,2:6:4.11:0,4,11	1/1:3,1:6:3.53:20,4,0	1/1:1,0:4:2.98:21,3,0	1/1:1,1:2:3.01:43,3,0	./.	./.	1/1:1,2:5:0.47:1,0,0	./.	1/1:2,4:8:2.99:23,3,0	1/1:2,1:3:3:26,3,0	1/1:5,3:10:6.10:148,6,0	1/1:0,2:4:11.72:103,12,0	1/1:1,0:1:2.98:22,3,0
chr10	84988694	.	GT	G	622.84	PASS	AC=30;AF=0.750;AN=40;BaseQRankSum=-2.131;DP=176;FS=2.512;HRun=1;HaplotypeScore=27.3089;InbreedingCoeff=0.3539;MQ=42.98;MQ0=18;MQRankSum=-1.715;QD=7.79;ReadPosRankSum=2.962;VQSLOD=1.1790;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,7:10:0.35:1,0,0	./.	0/0:23,0:1:3.01:0,3,48	0/0:23,0:3:4.37:0,4,50	./.	1/1:3,5:8:3.42:25,3,0	./.	1/1:5,1:6:16.21:124,16,0	1/1:1,3:3:3.89:28,4,0	1/1:0,4:4:11.99:112,12,0	1/1:2,2:4:2.68:11,3,0	1/1:2,3:4:6:54,6,0	./.	0/0:9,2:11:0.47:0,0,1	1/1:4,2:6:0.47:1,0,0	1/1:2,5:6:3.74:14,4,0	1/1:3,3:6:0.80:8,1,0	1/1:4,0:4:2.99:24,3,0	1/1:1,2:2:3.01:37,3,0	./.	./.	0/0:2,3:5:0:0,0,0	./.	./.	1/1:1,1:2:2.99:24,3,0	1/1:2,5:7:8.93:161,9,0	1/1:1,3:4:11.68:95,12,0	0/0:1,0:1:0:0,0,0
chr10	84988695	.	TA	T	227.39	PASS	AB=0.958;AC=23;AF=0.639;AN=36;BaseQRankSum=-0.499;DP=169;FS=4.922;HRun=1;HaplotypeScore=28.2192;InbreedingCoeff=0.1673;MQ=38.94;MQ0=17;MQRankSum=-0.466;QD=3.61;ReadPosRankSum=1.785;VQSLOD=0.3486;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,1:10:0.47:0,0,2	./.	0/0:22,0:1:3.01:0,3,45	0/0:22,0:2:3.48:0,3,42	0/0:4,0:4:0:0,0,0	1/1:7,1:8:2.31:11,2,0	./.	0/1:6,0:6:4.84:23,0,5	1/1:4,0:3:4.88:20,5,0	1/1:4,0:4:8.69:44,9,0	1/1:4,0:4:2.98:21,3,0	1/1:5,0:4:5.36:30,5,0	./.	./.	./.	0/1:6,1:6:3.98:11,0,4	1/1:5,0:5:3.55:23,4,0	1/1:4,0:4:1.82:5,2,0	1/1:3,0:2:2.88:15,3,0	./.	./.	0/0:4,0:4:0:0,0,0	./.	./.	1/1:2,0:2:2.96:19,3,0	0/1:7,0:7:16.35:50,0,16	1/1:3,1:4:10.95:58,11,0	./.
chr10	84990635	.	AGTGTGTGTGTGT	A	402.99	PASS	AB=0.869;AC=15;AF=0.300;AN=50;BaseQRankSum=1.662;DP=377;FS=0.000;HRun=0;HaplotypeScore=129.3868;InbreedingCoeff=0.6135;MQ=63.89;MQ0=13;MQRankSum=-3.608;QD=3.33;ReadPosRankSum=-0.679;VQSLOD=2.4195;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:0.93:1,0,239	1/1:6,0:5:6:71,6,0	0/0:22,0:12:5.22:0,5,33	./.	0/0:6,0:7:12.02:0,12,452	0/0:26,0:24:36.12:0,36,1798	0/1:9,0:18:0:1,0,0	0/1:20,0:20:4.96:5,0,116	1/1:6,3:10:4.49:98,4,0	1/1:7,1:6:9.03:224,9,0	1/1:6,3:8:8.92:72,9,0	0/0:15,0:16:36.04:0,36,1549	0/0:9,0:9:15.05:0,15,735	0/0:11,0:11:12.04:0,12,655	1/1:6,3:9:8.91:61,9,0	./.	1/1:6,1:7:2.97:20,3,0	0/0:11,0:13:24.08:0,24,1145	0/0:15,0:15:12.03:0,12,170	0/0:6,0:8:9.03:0,9,254	0/0:18,0:20:23.96:0,24,527	./.	0/0:4,0:4:12.04:0,12,702	0/0:27,0:27:57.18:0,57,2980	0/0:3,1:8:2.92:0,3,17	0/0:15,0:16:18.06:0,18,585	0/0:9,0:12:10:0,10,291	0/0:3,0:4:9.03:0,9,466
chr10	84990683	.	TGA	T	600.79	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=6.481;DP=414;FS=0.000;HRun=0;HaplotypeScore=94.1112;InbreedingCoeff=0.8114;MQ=45.77;MQ0=25;MQRankSum=-6.207;QD=11.13;ReadPosRankSum=-1.550;VQSLOD=3.1704;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:68.98:0,69,1120	1/1:1,1:1:3.01:37,3,0	0/0:29,0:5:15.01:0,15,214	0/0:30,0:4:6.48:0,6,60	0/0:9,0:9:15.03:0,15,218	0/0:22,0:22:42.35:0,42,635	0/0:28,1:27:36.08:0,36,590	0/0:17,0:17:42.14:0,42,675	1/1:4,9:12:15.05:186,15,0	1/1:3,5:8:18.05:214,18,0	1/1:4,3:6:3.01:37,3,0	0/0:22,0:22:43.45:0,43,686	0/0:13,0:13:19.50:0,19,357	0/0:13,0:13:31.64:0,32,467	1/1:2,11:12:12.04:149,12,0	1/1:1,4:4:9.03:111,9,0	1/1:1,5:6:3.48:38,3,0	0/0:15,0:15:7.39:0,7,392	0/0:9,0:9:21.07:0,21,339	0/0:8,0:8:21.07:0,21,331	0/0:20,0:19:41.82:0,42,659	0/0:12,0:12:18.06:0,18,295	0/0:5,0:5:11.74:0,12,110	0/0:36,0:36:81.09:0,81,1237	0/0:7,0:7:5.99:0,6,96	0/0:10,0:10:24.08:0,24,392	0/0:14,0:14:36.12:0,36,586	0/0:6,0:6:14.43:0,14,147
chr10	84990735	.	AGAGCACGCGC	A	3066.94	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.420;DP=518;FS=4.084;HRun=0;HaplotypeScore=162.9570;InbreedingCoeff=0.8985;MQ=69.67;MQ0=13;MQRankSum=-8.007;QD=46.47;ReadPosRankSum=-0.733;VQSLOD=3.2520;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:87.83:0,88,4511	1/1:0,1:1:3.01:102,3,0	0/0:45,0:26:18.57:0,19,1385	0/0:54,0:22:39.49:0,39,1204	0/0:14,0:14:30.10:0,30,1485	0/0:25,0:25:70.07:0,70,3678	0/0:33,0:33:73.54:0,74,3665	0/0:21,0:21:60.18:0,60,2295	1/1:4,14:18:21.07:645,21,0	1/1:1,11:12:33.11:1116,33,0	1/1:1,6:7:3.01:102,3,0	0/0:15,0:15:39.13:0,39,1952	0/0:17,0:17:47.95:0,48,2468	0/0:14,0:14:42.14:0,42,2154	1/1:5,7:12:15.52:381,16,0	1/1:1,11:12:21.07:698,21,0	1/1:0,4:4:6.02:203,6,0	0/0:20,0:20:54.12:0,54,2562	0/0:14,0:13:36.12:0,36,1739	0/0:9,0:9:27.09:0,27,1323	0/0:18,0:17:44.22:0,44,2255	0/0:15,0:15:18.06:0,18,891	0/0:8,0:8:12.04:0,12,518	0/0:33,0:33:96.33:0,96,4977	0/0:9,0:9:18.02:0,18,826	0/0:20,0:20:60.21:0,60,2913	0/0:26,0:26:78.27:0,78,4086	0/0:7,0:7:21.07:0,21,1073
chr10	84992605	.	A	AAG	4808.68	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-13.520;DP=663;FS=4.274;HRun=0;HaplotypeScore=94.6680;InbreedingCoeff=0.9800;MQ=77.27;MQ0=4;MQRankSum=-1.371;QD=35.10;ReadPosRankSum=1.796;VQSLOD=7.3497;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:96.27:0,96,1164	1/1:3,6:9:14.89:245,15,0	0/0:27,0:25:34.03:0,34,465	0/0:33,0:29:32.76:0,33,457	0/0:17,0:17:39.12:0,39,480	0/0:19,0:20:51.45:0,51,592	0/0:24,0:24:54.17:0,54,665	0/0:32,0:32:66.20:0,66,801	1/1:6,21:27:14.23:746,14,0	1/1:3,19:22:57.19:930,57,0	1/1:5,10:14:27.09:441,27,0	0/0:25,0:25:57.18:0,57,702	0/0:23,0:23:54.17:0,54,665	0/0:25,0:25:48.13:0,48,578	1/1:2,19:20:48.16:783,48,0	1/1:2,14:16:39.13:636,39,0	1/1:6,21:27:63.22:1028,63,0	0/0:31,0:31:66.20:0,66,803	0/0:25,0:25:63.20:0,63,774	0/0:12,0:12:24.08:0,24,296	0/0:20,0:21:56.99:0,57,665	0/0:28,0:28:69.22:0,69,850	0/0:18,0:18:45.14:0,45,554	0/0:30,0:30:66.19:0,66,800	0/0:30,0:29:81.22:0,81,972	0/0:26,1:27:8.18:0,8,592	0/0:29,0:29:72.23:0,72,886	0/0:8,0:8:24.03:0,24,266
chr10	84993763	.	AC	A	5759.57	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=7.826;DP=449;FS=12.161;HRun=8;HaplotypeScore=60.2512;InbreedingCoeff=0.9870;MQ=73.46;MQ0=1;MQRankSum=-6.099;QD=23.04;ReadPosRankSum=3.308;VQSLOD=4.8197;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,20:29:72.11:695,72,0	1/1:1,10:11:27.04:261,27,0	0/0:19,0:18:42.50:0,43,418	0/0:9,0:6:11.78:0,12,96	0/0:20,0:20:48.10:0,48,543	0/0:17,0:16:42.11:0,42,482	1/1:7,14:21:36.05:347,36,0	1/1:7,11:18:39.94:374,40,0	0/0:4,0:4:12.04:0,12,144	1/1:1,19:20:57.08:544,57,0	1/1:2,11:13:26.98:249,27,0	0/0:19,0:19:54.11:0,54,605	0/0:9,0:9:27.08:0,27,326	0/0:10,0:10:27.08:0,27,326	1/1:1,6:7:18.03:174,18,0	1/1:2,5:7:21.02:198,21,0	1/1:5,23:28:63.10:608,63,0	0/0:22,0:22:48.09:0,48,551	1/1:1,17:18:48.07:459,48,0	1/1:1,15:16:42.06:405,42,0	1/1:3,18:21:42.07:406,42,0	1/1:2,8:10:30.05:289,30,0	0/0:11,0:11:27.06:0,27,301	0/0:18,1:19:19.15:0,19,493	1/1:3,13:16:39.06:376,39,0	0/0:17,0:17:36.08:0,36,403	1/1:0,15:15:38.86:376,39,0	0/0:22,1:23:19.17:0,19,514
chr10	84993818	.	TA	T	4667.23	PASS	AB=0.933;AC=29;AF=0.518;AN=56;BaseQRankSum=14.032;DP=443;FS=0.789;HRun=8;HaplotypeScore=75.0302;InbreedingCoeff=0.9327;MQ=64.93;MQ0=1;MQRankSum=-13.638;QD=21.41;ReadPosRankSum=-1.442;VQSLOD=4.5269;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:60.16:0,60,710	1/1:1,5:6:15.02:145,15,0	0/1:13,0:11:0.13:0,0,89	0/0:5,0:3:5.77:0,6,31	0/0:29,0:29:75.20:0,75,881	0/0:14,0:14:42.12:0,42,497	1/1:5,13:18:39.05:376,39,0	0/0:28,0:28:78.23:0,78,933	1/1:4,3:7:12:111,12,0	1/1:5,17:22:51.06:486,51,0	1/1:1,18:20:56.07:517,56,0	0/0:19,0:19:51.14:0,51,605	0/0:11,0:11:33.10:0,33,398	0/0:17,0:17:45.07:0,45,525	1/1:1,8:9:24.04:231,24,0	1/1:1,12:13:39.02:363,39,0	1/1:5,16:21:45.07:434,45,0	0/0:20,0:20:51.16:0,51,616	1/1:6,16:22:53.98:498,54,0	1/1:3,19:22:50.94:465,51,0	1/1:2,3:5:8.96:77,9,0	1/1:2,9:11:27.04:260,27,0	0/0:13,0:13:39.12:0,39,468	0/0:13,0:13:33.10:0,33,399	1/1:3,14:17:48.06:456,48,0	0/0:18,1:19:19.19:0,19,505	1/1:3,8:11:26.99:247,27,0	0/0:10,0:10:30.09:0,30,362
chr10	84993832	.	AT	A	5075.97	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=13.104;DP=453;FS=1.727;HRun=10;HaplotypeScore=75.4446;InbreedingCoeff=0.9225;MQ=65.43;MQ0=1;MQRankSum=-8.491;QD=18.66;ReadPosRankSum=-2.497;VQSLOD=4.6486;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:59.94:514,60,0	1/1:3,6:9:20.96:177,21,0	0/0:11,0:8:11.01:0,11,93	0/1:9,0:7:6.75:7,0,71	0/0:26,2:28:38.68:0,39,682	0/0:14,0:14:39.11:0,39,431	1/1:3,13:16:38.94:331,39,0	1/1:8,21:29:62.95:543,63,0	1/1:0,9:9:26.99:234,27,0	1/1:7,12:19:44.97:384,45,0	1/1:3,16:19:47.59:362,48,0	0/0:15,0:15:39.08:0,39,412	0/0:13,0:13:36.10:0,36,395	0/0:19,0:19:57.15:0,57,630	1/1:1,7:9:23.03:188,23,0	1/1:1,15:16:44.99:391,45,0	1/1:5,14:20:31.96:259,32,0	0/0:18,0:18:48.11:0,48,521	1/1:5,17:23:56:474,56,0	1/1:5,18:23:47.62:398,48,0	1/1:2,5:7:8.89:68,9,0	1/1:5,5:10:17.81:136,18,0	0/0:14,0:14:36.10:0,36,398	0/0:18,0:18:54.13:0,54,588	1/1:5,14:19:44.84:375,45,0	0/0:19,1:20:25.08:0,25,497	1/1:2,9:11:26.99:234,27,0	0/0:11,0:11:27.06:0,27,290
chr10	84994177	.	AT	A	6168.72	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=11.640;DP=551;FS=5.344;HRun=10;HaplotypeScore=64.6121;InbreedingCoeff=0.8946;MQ=69.39;MQ0=0;MQRankSum=-0.732;QD=20.56;ReadPosRankSum=0.388;VQSLOD=5.8667;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,2:29:17.12:0,17,644	1/1:1,5:6:15:130,15,0	0/0:10,0:8:6.01:0,6,60	0/1:11,0:10:8.58:9,0,37	0/0:28,1:29:50.30:0,50,754	0/0:25,0:26:62.99:0,63,669	1/1:3,27:30:74.98:651,75,0	0/0:19,0:19:48.09:0,48,517	1/1:1,13:14:38.99:338,39,0	1/1:3,20:23:59.93:514,60,0	1/1:1,20:22:59.02:501,59,0	0/0:17,0:17:39.11:0,39,431	0/0:18,0:19:50.96:0,51,535	0/0:14,0:14:36.10:0,36,398	1/1:2,21:23:56.81:494,57,0	1/1:2,16:18:50.99:443,51,0	1/1:1,32:33:83.97:728,84,0	0/0:22,0:22:51.10:0,51,550	1/1:9,8:17:2.81:253,3,0	1/1:2,20:22:56.96:495,57,0	1/1:4,15:19:41.98:364,42,0	1/1:1,12:13:35.99:312,36,0	0/0:11,0:11:33.08:0,33,358	0/0:16,0:16:45.12:0,45,491	1/1:5,20:25:59.95:521,60,0	0/0:27,0:28:72.01:0,72,764	1/1:6,18:24:47.96:416,48,0	0/0:11,0:10:27.05:0,27,288
chr10	84994262	.	A	AAAACAAAAAC	20163.19	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-7.827;DP=606;FS=1.048;HRun=0;HaplotypeScore=159.1989;InbreedingCoeff=0.9648;MQ=55.82;MQ0=10;MQRankSum=-10.084;QD=64.21;ReadPosRankSum=1.362;VQSLOD=4.4535;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:74.73:0,75,1804	1/1:3,3:8:24.08:726,24,0	0/0:27,0:10:10.67:0,11,92	0/0:23,0:9:13.38:0,13,108	0/0:26,0:26:69.88:0,70,1449	0/0:22,0:22:63.21:0,63,1325	1/1:3,11:18:18.04:892,18,0	0/0:26,0:26:65.78:0,66,1113	1/1:11,6:21:63.18:1872,63,0	1/1:14,2:24:63.17:1584,63,0	1/1:0,25:25:36.11:1440,36,0	0/0:11,0:11:30.09:0,30,757	0/0:15,0:15:41.25:0,41,787	0/0:25,0:25:70.86:0,71,1498	1/1:17,5:28:75.17:1900,75,0	1/1:8,5:16:45.12:1310,45,0	1/1:19,6:34:90.13:2264,90,0	0/0:17,0:17:51.13:0,51,1074	1/1:8,18:30:77.25:1607,77,0	1/1:14,5:24:62.90:1625,63,0	1/1:3,4:11:2.75:322,3,0	1/1:8,6:16:39.08:1215,39,0	0/0:17,0:17:50.65:0,51,1200	0/0:17,0:17:47.51:0,48,1063	1/1:16,4:27:60.11:1549,60,0	0/0:29,0:29:84.17:0,84,1523	1/1:14,7:28:69.08:1857,69,0	0/0:11,0:9:27.06:0,27,561
chr10	84996180	.	TCTGTCTCTTCAC	T	3193.33	PASS	AB=0.770;AC=14;AF=0.250;AN=56;BaseQRankSum=7.647;DP=668;FS=12.794;HRun=0;HaplotypeScore=228.0592;InbreedingCoeff=-0.3491;MQ=72.17;MQ0=7;MQRankSum=-8.394;QD=9.95;ReadPosRankSum=0.676;VQSLOD=1.2309;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,11:33:99:222,0,3386	0/1:6,3:9:97.36:97,0,959	0/0:50,0:26:57.67:0,58,1739	0/0:65,0:22:45.21:0,45,1330	0/0:19,6:25:56.97:0,57,3010	0/1:11,12:23:82.60:83,0,1717	0/1:21,9:30:99:154,0,2865	0/1:26,8:34:99:831,0,3944	0/1:6,7:13:99:100,0,908	0/1:15,4:19:99:232,0,2426	0/0:14,6:20:40.49:0,40,2121	0/0:14,2:16:42.14:0,42,2472	0/1:16,11:27:99:413,0,2796	0/0:17,9:26:12.31:0,12,2718	0/1:15,7:22:76.27:76,0,2205	0/1:18,6:24:62.86:63,0,2973	0/1:14,10:24:99:769,0,2273	0/1:14,2:16:99:189,0,2163	0/0:15,0:15:42.14:0,42,2457	0/0:9,0:9:27.08:0,27,1416	0/0:22,0:22:64.44:0,64,3520	0/1:19,9:28:58.15:58,0,3163	0/0:14,4:18:34.42:0,34,2098	0/0:18,1:19:1.16:0,1,2617	0/0:12,8:20:36.10:0,36,1829	0/1:18,1:19:61.34:61,0,3161	0/0:24,0:24:70.47:0,70,3980	0/0:18,0:17:48.16:0,48,2724
chr10	84996192	.	CGAGAGAGAGAGAGAGA	C	437.43	PASS	AB=0.899;AC=6;AF=0.125;AN=48;BaseQRankSum=3.056;DP=708;FS=32.164;HRun=0;HaplotypeScore=275.2079;InbreedingCoeff=0.3543;MQ=62.88;MQ0=16;MQRankSum=-2.892;QD=5.91;ReadPosRankSum=-1.390;VQSLOD=1.3945;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:15.09:0,15,143	0/1:8,1:10:73.41:189,0,73	./.	./.	0/0:25,0:26:15.05:0,15,551	0/0:24,0:24:12.02:0,12,202	./.	0/0:37,0:37:16.67:0,17,143	1/1:13,0:14:3.01:56,3,0	0/0:22,0:21:5.66:0,6,156	0/0:19,0:19:0.47:0,0,1	0/0:18,0:18:9.03:0,9,247	0/0:27,0:28:20.94:0,21,358	0/1:27,1:28:54.99:55,0,329	1/1:19,2:22:9.03:252,9,0	0/0:25,0:26:19.78:0,20,266	0/0:28,0:28:6.49:0,6,95	0/0:19,0:20:23.10:0,23,678	0/0:15,0:16:15:0,15,284	./.	0/0:27,0:25:15.05:0,15,456	0/0:30,0:29:3:0,3,25	0/0:18,0:18:3.01:0,3,49	0/0:22,0:22:15.52:0,16,551	0/0:22,0:21:18.06:0,18,937	0/0:18,0:18:12.92:0,13,281	0/0:20,0:20:18.06:0,18,503	0/0:15,0:15:14.26:0,14,291
chr10	84996516	.	GA	G	10348.34	PASS	AB=0.698;AC=21;AF=0.375;AN=56;BaseQRankSum=24.530;DP=1004;FS=16.722;HRun=4;HaplotypeScore=173.2731;InbreedingCoeff=-0.5997;MQ=74.01;MQ0=0;MQRankSum=-2.603;QD=12.01;ReadPosRankSum=2.987;VQSLOD=2.3945;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:46,47:93:99:1360,0,1412	0/1:5,8:13:99:249,0,171	0/0:22,0:22:66.21:0,66,891	0/0:17,0:17:48.15:0,48,644	0/1:20,16:36:99:308,0,665	0/1:24,12:36:99:264,0,808	0/1:26,20:46:99:518,0,896	0/1:26,18:44:99:483,0,793	0/1:17,25:42:99:648,0,519	0/1:32,34:66:99:988,0,1024	0/1:15,13:28:99:383,0,530	0/1:14,17:31:99:491,0,419	0/1:23,13:36:99:328,0,789	0/1:19,13:32:99:348,0,553	0/1:24,15:39:99:425,0,852	0/1:20,23:43:99:698,0,708	0/1:30,21:51:99:551,0,897	0/1:20,20:40:99:538,0,648	0/0:17,0:17:45.15:0,45,629	0/0:17,0:17:51.17:0,51,713	0/0:41,0:41:99:0,111,1528	0/1:18,25:43:99:575,0,603	0/1:24,15:38:99:398,0,774	0/1:33,21:54:99:503,0,1061	0/1:22,11:33:99:269,0,740	0/1:15,2:17:20.89:21,0,557	0/0:18,0:18:54.18:0,54,756	0/0:10,0:10:30.08:0,30,399
chr10	84996635	.	G	GTT	7175.89	PASS	AB=0.891;AC=19;AF=0.339;AN=56;BaseQRankSum=3.489;DP=1034;FS=0.274;HRun=1;HaplotypeScore=181.3761;InbreedingCoeff=-0.5119;MQ=54.53;MQ0=21;MQRankSum=0.651;QD=8.95;ReadPosRankSum=2.843;VQSLOD=1.5955;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:70,5:75:99:649,0,261	0/1:5,8:13:76.33:152,0,76	0/0:26,0:14:31.43:0,31,223	0/0:49,0:21:52.71:0,53,435	0/1:39,0:40:92.37:92,0,416	0/1:36,2:37:99:449,0,311	0/1:44,4:48:99:520,0,115	0/1:46,0:45:99:474,0,226	0/1:24,23:47:99:275,0,426	0/1:33,0:37:99:277,0,292	0/1:25,0:27:99:215,0,192	0/1:41,0:41:99:301,0,405	0/1:28,4:32:99:378,0,318	0/1:19,10:30:10.36:10,0,317	0/1:40,2:40:99:316,0,429	0/1:29,6:35:99:588,0,151	0/1:55,13:67:99:972,0,582	0/1:39,6:42:99:468,0,494	0/0:15,0:13:28.95:0,29,198	0/0:11,0:10:14.98:0,15,123	0/0:45,0:42:27.41:0,27,303	0/1:37,5:42:92.13:627,0,92	0/1:23,0:22:81.96:122,0,82	0/1:70,1:71:99:291,0,750	0/0:16,7:25:20.79:0,21,169	0/0:29,0:29:61.14:0,61,607	0/0:13,0:13:29.18:0,29,188	0/0:15,0:15:34.72:0,35,309
chr10	84997368	.	AAAAG	A	10026.99	PASS	AB=0.729;AC=20;AF=0.357;AN=56;BaseQRankSum=18.476;DP=949;FS=4.598;HRun=0;HaplotypeScore=162.0263;InbreedingCoeff=-0.5608;MQ=63.62;MQ0=2;MQRankSum=-2.774;QD=12.81;ReadPosRankSum=4.356;VQSLOD=4.4074;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:40,25:65:99:814,0,1719	0/1:15,9:24:99:348,0,597	0/0:28,0:24:25.53:0,26,573	0/0:19,0:11:9.47:0,9,223	0/1:32,7:39:99:312,0,1708	0/1:27,22:48:99:639,0,1603	0/1:11,8:19:99:265,0,478	0/1:28,22:48:99:803,0,1173	0/1:20,12:32:99:199,0,888	0/1:27,7:34:99:431,0,942	0/1:24,12:36:99:467,0,1279	0/1:25,12:37:99:416,0,1397	0/1:22,16:38:99:571,0,1095	0/1:21,9:30:99:187,0,1093	0/1:23,13:35:99:273,0,1309	0/1:22,11:33:99:333,0,1046	0/1:30,29:58:99:883,0,1579	0/1:26,11:37:99:365,0,1437	0/0:27,0:27:60.21:0,60,1371	0/0:11,0:11:33.11:0,33,763	0/0:8,0:8:18.06:0,18,414	0/1:19,20:39:99:816,0,934	0/1:16,22:38:99:804,0,868	0/1:22,10:32:99:323,0,1309	0/1:30,26:56:99:779,0,1626	0/0:26,0:26:41.37:0,41,1492	0/0:37,0:37:99:0,105,2336	0/0:10,0:10:30.10:0,30,712
chr10	84998820	.	T	TC	2784.44	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=9.810;DP=464;FS=32.819;HRun=8;HaplotypeScore=76.8734;InbreedingCoeff=0.8858;MQ=78.65;MQ0=0;MQRankSum=-2.016;QD=12.27;ReadPosRankSum=-1.404;VQSLOD=0.6566;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:76.53:0,77,701	1/1:1,2:4:8.86:84,9,0	0/1:26,0:23:28.10:28,0,284	0/0:11,0:11:9.88:0,10,98	0/0:17,0:17:44.24:0,44,389	0/0:15,0:15:36:0,36,328	1/1:5,19:24:54.16:622,54,0	0/0:23,0:23:35.97:0,36,321	1/1:4,10:14:24.07:276,24,0	1/1:7,8:15:22.72:220,23,0	1/1:1,7:8:18.05:207,18,0	0/0:14,0:14:38.98:0,39,342	0/0:14,0:14:35.98:0,36,319	0/0:17,0:17:48.02:0,48,439	1/1:4,17:21:11.65:388,12,0	1/1:2,2:13:14.24:92,14,0	1/1:4,21:25:48.11:554,48,0	0/0:21,0:21:51.02:0,51,466	1/1:7,1:10:13.79:85,14,0	1/1:6,0:15:14.33:78,14,0	1/1:5,1:15:17.21:107,17,0	1/1:1,0:11:11.36:58,11,0	0/0:14,0:14:33.01:0,33,302	0/0:23,0:23:63.02:0,63,576	1/1:1,1:13:22.89:135,23,0	0/0:25,0:25:50.99:0,51,461	1/1:5,0:13:11.49:76,11,0	0/0:7,0:7:14.99:0,15,137
chr10	85000138	.	GCT	G	1541.95	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.131;DP=498;FS=0.000;HRun=0;HaplotypeScore=61.6040;InbreedingCoeff=0.9786;MQ=92.87;MQ0=0;MQRankSum=-5.582;QD=34.27;ReadPosRankSum=-1.183;VQSLOD=4.6819;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:66.22:924,66,0	0/0:8,0:8:24.08:0,24,428	0/0:22,0:22:57.19:0,57,941	0/0:21,0:21:51.14:0,51,827	0/0:16,0:16:45.15:0,45,808	0/0:24,0:24:66.21:0,66,1157	0/0:32,0:32:90.29:0,90,1591	1/1:2,18:20:54.17:739,54,0	0/0:35,0:35:96.33:0,96,1727	0/0:11,0:11:33.11:0,33,592	0/0:9,0:9:21.06:0,21,369	0/0:13,0:13:39.13:0,39,702	0/0:15,0:15:45.15:0,45,808	0/0:14,0:14:39.13:0,39,693	0/0:17,0:17:39.13:0,39,702	0/0:16,0:16:39.13:0,39,700	0/0:35,0:35:81.28:0,81,1447	0/0:27,0:27:72.25:0,72,1285	0/0:15,0:15:39.13:0,39,700	0/0:11,0:11:30.10:0,30,537	0/0:18,0:18:48.16:0,48,864	0/0:6,0:6:12.04:0,12,215	0/0:13,0:13:36.12:0,36,633	0/0:20,0:20:51.17:0,51,918	0/0:14,0:14:39.13:0,39,700	0/0:17,0:17:51.17:0,51,910	0/0:17,0:17:42.14:0,42,755	0/0:7,0:7:21.07:0,21,378
chr10	85000217	.	AG	A	5401.25	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=3.412;DP=513;FS=0.000;HRun=5;HaplotypeScore=66.2058;InbreedingCoeff=0.9631;MQ=86.54;MQ0=4;MQRankSum=0.024;QD=19.93;ReadPosRankSum=-0.627;VQSLOD=4.0526;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,13:30:77.42:726,77,0	1/1:5,3:8:23.99:224,24,0	0/0:33,1:19:10.67:0,11,201	0/0:29,1:24:6.03:0,6,163	0/0:18,0:18:53:0,53,554	0/0:14,0:14:40.62:0,41,453	1/1:8,10:18:41.02:415,41,0	1/1:11,6:17:39.49:370,39,0	1/1:5,10:15:21.51:228,22,0	1/1:4,13:17:40.04:351,40,0	1/1:8,5:13:34.84:326,35,0	0/0:19,0:19:32.33:0,32,376	0/0:12,0:12:30.68:0,31,328	0/0:12,0:12:29.71:0,30,326	1/1:2,13:15:21.53:237,22,0	1/1:2,20:22:23.62:262,24,0	1/1:5,27:32:51.03:533,51,0	0/0:30,0:30:72.31:0,72,908	1/1:2,13:16:39.05:390,39,0	1/1:3,6:9:11.26:142,11,0	1/1:3,16:19:20.52:339,21,0	1/1:2,12:14:33.21:281,33,0	0/0:18,0:18:43.49:0,43,462	0/0:26,0:26:64.85:0,65,788	1/1:7,6:13:28.63:310,29,0	0/0:25,1:26:31.52:0,32,649	1/1:1,12:13:24.07:269,24,0	0/0:3,0:3:8.86:0,9,76
chr10	85000221	.	GGA	G	1888.37	PASS	AB=0.942;AC=20;AF=0.357;AN=56;BaseQRankSum=8.710;DP=525;FS=1.200;HRun=0;HaplotypeScore=85.5202;InbreedingCoeff=-0.0487;MQ=81.69;MQ0=4;MQRankSum=0.791;QD=6.03;ReadPosRankSum=3.761;VQSLOD=2.3510;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,4:32:14.58:312,0,15	0/1:8,1:9:0.09:95,0,0	0/0:31,0:16:15.64:0,16,311	0/1:28,0:21:7.03:7,0,195	0/0:18,0:18:53.95:0,54,754	0/0:16,0:16:48.05:0,48,709	0/1:16,1:17:20.89:130,0,21	1/1:14,3:18:10.03:236,10,0	0/1:15,1:16:50.40:50,0,79	0/1:16,1:17:36.39:166,0,36	0/1:13,1:14:12.29:147,0,12	0/0:18,0:18:51.31:0,51,653	0/0:12,0:12:35.78:0,36,491	0/0:12,0:13:39.07:0,39,545	1/1:16,0:16:5.57:45,6,0	0/1:22,1:23:9.23:65,0,9	0/1:30,4:33:16.03:205,0,16	0/0:29,0:29:77.64:0,78,1297	0/1:17,1:18:38.75:168,0,39	0/1:8,1:9:30.15:84,0,30	1/1:17,1:18:7.94:83,8,0	0/1:16,0:16:21.03:121,0,21	0/0:17,0:17:45.04:0,45,643	0/0:27,0:27:56.09:0,56,1149	0/1:14,1:15:30.12:118,0,30	0/0:27,0:27:65.73:0,66,943	0/1:13,0:13:11.34:25,0,11	0/0:4,0:4:11.88:0,12,136
chr10	85001599	.	TG	T	4657.24	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=1.854;DP=343;FS=0.000;HRun=9;HaplotypeScore=42.5597;InbreedingCoeff=0.9230;MQ=84.63;MQ0=2;MQRankSum=-2.132;QD=20.34;ReadPosRankSum=2.147;VQSLOD=4.8956;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:33:69.91:633,70,0	1/1:3,9:12:27.01:247,27,0	0/0:18,0:17:16.92:0,17,253	0/0:8,0:8:11.87:0,12,118	0/0:9,0:9:18.05:0,18,206	0/0:6,0:6:15.04:0,15,171	1/1:2,20:22:51.02:467,51,0	1/1:6,7:13:18.01:165,18,0	1/1:1,8:9:18.01:165,18,0	1/1:1,6:7:15:137,15,0	1/1:2,4:6:12:110,12,0	0/0:17,0:17:30.01:0,30,312	0/0:8,0:8:24.04:0,24,256	0/0:6,0:6:18.03:0,18,190	1/1:0,9:9:24.01:220,24,0	1/1:1,9:10:27.01:247,27,0	1/1:4,23:27:66.03:604,66,0	0/0:14,0:14:36.09:0,36,406	1/1:1,2:3:6:55,6,0	1/1:1,6:7:15.01:137,15,0	1/1:5,23:28:66:594,66,0	1/1:3,10:13:24.01:219,24,0	0/0:2,0:4:8.56:0,9,43	0/0:4,0:13:11.36:0,11,58	1/1:1,12:13:30.01:275,30,0	0/0:8,0:8:18.05:0,18,208	1/1:2,15:17:42.02:384,42,0	0/0:2,0:2:3:0,3,35
chr10	85002779	.	TA	T	2192.44	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=3.469;DP=384;FS=4.093;HRun=10;HaplotypeScore=42.8135;InbreedingCoeff=0.9624;MQ=76.73;MQ0=0;MQRankSum=-0.802;QD=18.90;ReadPosRankSum=0.467;VQSLOD=4.2590;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:33:62.61:0,63,323	0/0:3,0:3:6.02:0,6,66	0/0:13,0:11:18.01:0,18,177	0/0:12,0:12:30.77:0,31,322	0/0:11,0:11:33.09:0,33,365	0/0:13,0:13:33.09:0,33,365	1/1:4,21:26:59.02:501,59,0	0/0:10,0:21:40.43:0,40,250	0/0:8,0:8:24.06:0,24,265	0/0:19,0:19:42.11:0,42,457	0/0:8,0:8:21.06:0,21,232	0/0:7,0:7:21.04:0,21,223	0/0:6,0:6:18.03:0,18,184	0/0:16,1:17:25.07:0,25,497	0/0:6,0:6:18.05:0,18,199	1/1:2,8:10:23.99:208,24,0	0/0:21,0:21:30.69:0,31,541	0/0:22,0:22:60.10:0,60,635	1/1:3,17:20:50.98:443,51,0	1/1:1,4:5:12:104,12,0	1/1:1,15:16:38.99:339,39,0	1/1:1,8:9:20.99:182,21,0	0/0:8,0:9:14.87:0,15,147	0/0:18,0:18:54.13:0,54,588	1/1:4,12:16:32.97:282,33,0	0/0:16,0:16:42.11:0,42,464	1/1:0,14:14:38.99:339,39,0	0/0:5,0:5:12.03:0,12,131
chr10	85003726	.	CT	C	3548.99	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.284;DP=648;FS=7.490;HRun=7;HaplotypeScore=63.9219;InbreedingCoeff=0.9812;MQ=79.27;MQ0=0;MQRankSum=-0.375;QD=27.73;ReadPosRankSum=1.437;VQSLOD=4.3956;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,1657	0/0:6,0:6:18.06:0,18,225	0/0:26,0:26:60:0,60,663	0/0:14,0:14:6.56:0,7,213	0/0:25,0:25:69.21:0,69,855	0/0:24,0:24:72.22:0,72,894	0/0:21,0:21:60.17:0,60,732	0/0:29,0:29:78.24:0,78,970	0/0:21,1:22:35.60:0,36,759	0/0:20,0:20:54.17:0,54,677	0/0:17,0:17:51.15:0,51,624	0/0:27,0:27:78.24:0,78,969	0/0:10,0:10:27.08:0,27,328	0/0:31,0:31:90.29:0,90,1130	0/0:33,0:33:87.27:0,87,1081	1/1:2,21:23:57.13:581,57,0	0/0:42,0:42:99:0,114,1418	0/0:24,0:24:69.18:0,69,850	1/1:0,20:20:60.13:611,60,0	1/1:1,13:14:39.09:398,39,0	1/1:1,18:19:45.10:459,45,0	1/1:1,20:21:60.14:612,60,0	0/0:16,0:16:48.14:0,48,592	0/0:37,0:37:99:0,105,1290	1/1:1,10:11:30.07:306,30,0	0/0:32,0:32:78.23:0,78,951	1/1:0,20:20:57.13:581,57,0	0/0:20,0:20:60.18:0,60,739
chr10	85004366	.	C	CGG	18379.48	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-17.592;DP=640;FS=0.622;HRun=3;HaplotypeScore=65.5377;InbreedingCoeff=0.9994;MQ=86.08;MQ0=1;MQRankSum=-2.399;QD=48.88;ReadPosRankSum=1.877;VQSLOD=4.1931;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,41:44:99:2279,126,0	1/1:1,9:10:21.07:385,21,0	0/0:21,0:21:57.09:0,57,723	0/0:21,0:20:40.31:0,40,577	0/0:20,0:20:57.19:0,57,795	0/0:24,0:24:69.23:0,69,965	1/1:2,21:23:57.20:1045,57,0	1/1:3,17:20:50.97:758,51,0	1/1:0,18:18:54.19:989,54,0	1/1:0,21:21:63.22:1155,63,0	1/1:0,14:13:33.07:568,33,0	0/0:22,0:22:63.21:0,63,881	0/0:13,0:13:39.13:0,39,545	0/0:16,0:16:45.15:0,45,628	1/1:1,32:33:90.31:1650,90,0	1/1:2,30:32:87.30:1595,87,0	1/1:1,32:33:93.32:1705,93,0	0/0:24,0:24:72.24:0,72,1007	1/1:0,15:16:48.14:847,48,0	1/1:1,22:23:66.18:1171,66,0	1/1:0,21:21:57.20:1045,57,0	1/1:2,15:17:39.13:714,39,0	0/0:26,0:26:78.26:0,78,1086	0/0:27,0:27:75.25:0,75,1049	1/1:2,24:27:66.23:1209,66,0	0/0:28,0:28:75.25:0,75,1049	1/1:0,23:23:69.24:1264,69,0	0/0:22,0:22:66.22:0,66,923
chr10	85005728	.	CT	C	758.69	PASS	AB=1.000;AC=17;AF=0.315;AN=54;BaseQRankSum=6.611;DP=391;FS=4.357;HRun=1;HaplotypeScore=73.9125;InbreedingCoeff=0.6820;MQ=63.10;MQ0=16;MQRankSum=-5.845;QD=8.93;ReadPosRankSum=-1.645;VQSLOD=0.6105;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:59.74:0,60,650	0/1:1,0:1:0:0,0,0	0/0:26,0:11:32.30:0,32,358	0/0:48,0:22:55.93:0,56,624	0/0:19,0:19:35.74:0,36,437	0/0:20,0:20:29.86:0,30,361	0/1:8,0:8:16.98:31,0,17	0/0:36,0:36:68.37:0,68,768	0/0:6,0:6:13.42:0,13,64	0/0:2,0:1:2.80:0,3,13	./.	0/0:14,0:14:27.04:0,27,304	0/0:14,0:14:26.78:0,27,279	0/0:10,0:10:11.52:0,12,106	0/1:6,0:6:1.20:42,0,1	1/1:6,9:12:21.22:219,21,0	0/1:8,0:7:0.23:58,0,0	0/0:17,0:17:29.53:0,30,306	1/1:1,6:6:7.84:148,8,0	1/1:4,6:9:12.40:97,12,0	1/1:2,6:6:5.48:28,5,0	0/1:4,0:3:0.19:0,0,0	0/0:11,0:11:12.04:0,12,146	0/0:29,0:29:56.91:0,57,616	1/1:5,6:11:25.77:225,26,0	0/0:18,0:17:28.03:0,28,334	1/1:0,7:6:8.49:83,8,0	0/0:9,0:8:21.51:0,22,233
chr10	85005747	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCC	T	1023.93	PASS	AB=1.000;AC=13;AF=0.271;AN=48;BaseQRankSum=4.693;DP=384;FS=3.525;HRun=0;HaplotypeScore=259.4771;InbreedingCoeff=0.6421;MQ=46.85;MQ0=26;MQRankSum=-0.706;QD=16.25;ReadPosRankSum=0.923;VQSLOD=2.5009;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:72.15:0,72,4686	./.	0/0:15,0:4:8.61:0,9,330	0/0:39,0:13:23.78:0,24,941	0/0:17,0:17:26.84:0,27,1448	0/0:23,0:22:34.46:0,34,3167	0/1:6,0:6:0:0,0,0	0/0:31,0:28:75.22:0,75,4103	1/1:5,0:5:2.99:24,3,0	./.	./.	0/0:17,0:17:34.36:0,34,3287	0/0:15,0:15:26.66:0,27,1760	0/0:14,0:13:18.70:0,19,2012	1/1:3,9:12:3.01:296,3,0	1/1:5,1:6:2.79:278,3,0	1/1:3,18:20:4.12:299,4,0	0/0:20,0:20:51.12:0,51,5267	./.	1/1:6,1:5:2.75:240,3,0	0/0:5,0:4:0.47:0,0,1	0/0:5,0:2:0.89:0,1,2	0/0:11,0:11:12.04:0,12,517	0/0:35,0:33:73.57:0,74,6809	1/1:6,0:6:2.79:15,3,0	0/0:21,0:20:57.47:0,57,4433	0/0:5,0:5:0:0,0,0	0/0:6,0:4:12.04:0,12,1136
chr10	85006214	.	TC	T	2073.08	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.219;DP=681;FS=12.752;HRun=3;HaplotypeScore=66.8810;InbreedingCoeff=0.9002;MQ=96.43;MQ0=0;MQRankSum=-3.766;QD=32.91;ReadPosRankSum=0.857;VQSLOD=3.0760;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,45:46:99:1562,126,0	0/0:2,0:2:6.02:0,6,86	0/0:39,0:39:99:0,111,1487	0/0:27,0:27:58.60:0,59,935	0/0:15,0:15:45.13:0,45,627	0/0:22,0:22:60.18:0,60,843	0/0:36,0:36:93.31:0,93,1339	1/1:0,17:17:51.16:632,51,0	0/0:25,0:25:75.25:0,75,1079	0/0:15,0:15:45.15:0,45,648	0/0:9,0:9:24.08:0,24,345	0/0:33,0:33:96.31:0,96,1350	0/0:20,0:20:60.20:0,60,861	0/0:32,0:32:93.31:0,93,1338	0/0:29,0:29:87.29:0,87,1252	0/0:32,0:32:90.28:0,90,1273	0/0:31,0:31:90.28:0,90,1261	0/0:27,0:27:72.23:0,72,1018	0/0:18,0:18:51.17:0,51,734	0/0:15,0:15:45.15:0,45,647	0/0:56,0:56:99:0,163,2313	0/0:19,0:19:54.18:0,54,778	0/0:3,0:3:6.02:0,6,86	0/0:41,0:41:99:0,114,1604	0/0:13,0:13:39.13:0,39,561	0/0:22,0:22:66.21:0,66,934	0/0:25,0:25:75.23:0,75,1045	0/0:12,0:12:30.10:0,30,432
chr10	85006434	.	GT	G	1063.87	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-1.901;DP=327;FS=0.000;HRun=1;HaplotypeScore=47.9877;InbreedingCoeff=0.6201;MQ=73.12;MQ0=6;MQRankSum=-2.937;QD=22.64;ReadPosRankSum=-0.585;VQSLOD=3.2851;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:22:51.17:702,51,0	0/0:4,0:4:10.89:0,11,49	0/0:27,0:22:66.08:0,66,766	0/0:21,0:16:44.75:0,45,532	0/0:9,0:9:27.07:0,27,374	0/0:8,0:8:24.08:0,24,350	0/0:14,0:14:33.04:0,33,313	1/1:2,13:13:36.10:476,36,0	0/0:2,0:2:5.60:0,6,26	0/0:9,0:9:0.73:0,1,79	0/0:8,0:8:22.92:0,23,131	0/0:13,0:13:39.10:0,39,532	0/0:11,0:11:26.70:0,27,89	0/0:18,0:18:54.17:0,54,771	0/0:10,0:10:25.99:0,26,177	0/0:3,0:3:8.39:0,8,39	0/0:13,0:13:33.57:0,34,158	0/0:10,0:10:24.05:0,24,328	0/1:9,0:8:12.60:13,0,93	0/0:14,0:14:39.58:0,40,203	0/0:13,0:12:28.56:0,29,164	0/0:15,0:15:37.39:0,37,264	0/0:10,0:10:27.05:0,27,340	0/0:12,0:12:36.09:0,36,487	0/0:10,0:10:28.37:0,28,153	0/0:11,0:11:33.10:0,33,450	0/0:13,0:13:27.98:0,28,131	0/0:2,0:2:6.02:0,6,88
chr10	85006435	.	T	TG	3657.34	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-4.301;DP=325;FS=0.000;HRun=7;HaplotypeScore=41.1404;InbreedingCoeff=0.9472;MQ=72.94;MQ0=6;MQRankSum=-1.516;QD=20.90;ReadPosRankSum=1.227;VQSLOD=2.7039;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,1:22:28.95:110,29,0	1/1:0,4:4:12.04:145,12,0	0/0:26,0:22:44.96:0,45,414	0/0:18,0:15:21.79:0,22,300	0/0:9,0:9:24.04:0,24,232	0/0:8,0:8:24.01:0,24,224	1/1:14,0:14:32.58:214,33,0	1/1:13,2:13:19.88:84,20,0	1/1:0,2:2:6.02:72,6,0	1/1:0,9:9:27.07:314,27,0	1/1:1,6:7:15.05:181,15,0	0/0:13,0:13:33.05:0,33,319	0/0:11,0:11:31.76:0,32,168	0/0:18,0:18:51.07:0,51,486	1/1:4,8:12:15.05:181,15,0	1/1:0,3:3:9.03:109,9,0	1/1:0,13:13:36.11:435,36,0	0/0:9,0:9:21.95:0,22,187	1/1:4,6:9:15.05:180,15,0	1/1:3,12:15:36.11:434,36,0	1/1:2,10:11:21.06:254,21,0	1/1:5,10:15:24.07:290,24,0	0/0:10,0:10:21.03:0,21,203	0/0:12,0:12:30.05:0,30,290	1/1:1,8:9:24.07:290,24,0	0/0:11,0:11:27.03:0,27,255	1/1:0,12:12:30.09:362,30,0	0/0:2,0:2:6.01:0,6,58
chr10	85006436	.	G	GT	1028.12	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=3.420;DP=322;FS=0.535;HRun=1;HaplotypeScore=46.4377;InbreedingCoeff=0.4412;MQ=74.51;MQ0=6;MQRankSum=-2.568;QD=7.45;ReadPosRankSum=4.026;VQSLOD=0.9611;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:40.18:0,40,299	1/1:4,0:4:10.08:38,10,0	0/0:26,0:21:63.12:0,63,751	0/0:21,0:16:7.72:0,8,441	0/0:9,0:9:27.08:0,27,347	0/0:8,0:8:24.08:0,24,332	1/1:0,14:14:33.11:494,33,0	0/0:15,0:13:23.05:0,23,214	1/1:3,0:3:5.19:21,5,0	1/1:9,0:9:19.55:85,20,0	0/1:7,0:7:23.70:35,0,24	0/0:12,0:12:36.11:0,36,486	0/0:11,0:11:33.11:0,33,426	0/0:18,0:18:54.17:0,54,737	0/1:11,0:11:22.72:23,0,72	1/1:3,0:3:7.49:28,7,0	1/1:13,0:13:30.42:118,30,0	0/0:7,0:7:21.07:0,21,282	0/1:11,0:10:33.57:34,0,77	0/1:15,0:15:8.17:108,0,8	0/1:12,0:11:27.53:42,0,28	0/1:15,0:15:39.07:39,0,93	0/0:10,0:10:27.07:0,27,338	0/0:12,0:12:36.10:0,36,470	0/1:9,0:9:3.09:55,0,3	0/0:11,0:11:33.09:0,33,429	1/1:12,0:12:26.05:104,26,0	0/0:2,0:2:6.02:0,6,84
chr10	85007917	.	GCCGC	G	267.39	PASS	AB=1.000;AC=11;AF=0.306;AN=36;BaseQRankSum=0.354;DP=80;FS=1.799;HRun=0;HaplotypeScore=30.1101;InbreedingCoeff=0.4562;MQ=118.24;MQ0=0;MQRankSum=-2.081;QD=8.91;ReadPosRankSum=1.146;VQSLOD=1.4808;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,6:8:0:0,0,0	./.	0/1:15,0:12:5.99:6,0,510	0/0:11,0:8:14.91:0,15,249	./.	0/0:1,0:1:3.01:0,3,79	0/0:6,0:6:9.03:0,9,225	1/1:3,0:3:3.01:58,3,0	1/1:0,2:2:3.01:56,3,0	1/1:1,1:2:6.02:105,6,0	./.	0/0:4,0:4:12.04:0,12,295	0/0:6,0:6:15.05:0,15,343	./.	1/1:0,1:1:3.01:56,3,0	0/0:3,0:3:9.03:0,9,166	1/1:1,6:7:5.54:102,6,0	0/0:2,0:2:6.02:0,6,153	./.	./.	0/0:5,0:5:12.04:0,12,318	./.	0/0:1,0:1:3.01:0,3,39	./.	./.	0/0:2,0:2:3.01:0,3,82	0/0:1,0:1:0:0,0,0	./.
chr10	85008694	.	C	CG	1444.10	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.059;DP=434;FS=1.320;HRun=5;HaplotypeScore=45.2438;InbreedingCoeff=0.9195;MQ=68.88;MQ0=0;MQRankSum=-1.687;QD=27.77;ReadPosRankSum=-1.257;VQSLOD=2.8480;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:84.27:1105,84,0	0/0:3,0:3:8.98:0,9,84	0/0:7,0:7:17.91:0,18,166	0/0:8,0:8:9.49:0,9,119	0/0:15,0:15:45.11:0,45,483	0/0:16,0:16:38.28:0,38,417	0/0:23,0:23:57.11:0,57,601	1/1:4,13:17:36.09:461,36,0	0/0:15,0:15:45.11:0,45,483	0/0:10,0:10:27.07:0,27,289	0/0:4,0:4:12:0,12,116	0/0:18,0:18:42.09:0,42,442	0/0:14,0:14:42.11:0,42,451	0/0:26,0:26:72.16:0,72,765	0/0:10,0:10:30.08:0,30,322	0/0:19,0:19:54.13:0,54,580	0/0:40,0:40:99:0,105,1108	0/0:27,0:27:69.17:0,69,741	0/0:9,0:9:27.06:0,27,283	0/0:9,0:9:24.04:0,24,250	0/0:19,0:19:48.12:0,48,515	0/0:6,0:6:18.05:0,18,193	0/0:10,0:10:24.04:0,24,250	0/0:28,0:28:75.16:0,75,794	0/0:12,0:12:36.09:0,36,386	0/0:10,0:10:27.07:0,27,290	0/0:14,0:14:39.10:0,39,418	0/0:10,0:10:30.08:0,30,322
chr10	85008785	.	CAG	C	735.67	PASS	AB=0.888;AC=26;AF=0.464;AN=56;BaseQRankSum=4.145;DP=480;FS=0.694;HRun=0;HaplotypeScore=73.4039;InbreedingCoeff=0.3230;MQ=73.32;MQ0=11;MQRankSum=0.522;QD=2.64;ReadPosRankSum=0.909;VQSLOD=1.7357;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:29:4.81:31,0,5	1/1:5,0:5:5.68:28,6,0	0/1:41,0:22:0:0,0,0	0/0:49,0:23:1.41:0,1,2	0/0:14,0:14:18.04:0,18,238	0/1:18,2:20:33.67:140,0,34	0/1:15,0:22:7.22:7,0,17	0/0:26,0:25:17.09:0,17,202	1/1:8,0:9:1.50:11,1,0	1/1:6,0:8:4.39:18,4,0	1/1:10,0:10:2.84:14,3,0	0/0:20,0:22:20.55:0,21,208	0/0:6,0:6:10.57:0,11,117	0/0:9,0:10:9.02:0,9,107	1/1:14,1:17:6.56:57,7,0	1/1:7,8:15:14.70:141,15,0	1/1:6,1:18:22.89:130,23,0	0/1:15,3:18:38.16:38,0,285	0/1:17,0:16:4.95:5,0,67	0/0:6,1:7:0:0,0,0	0/0:13,0:13:18.06:0,18,251	0/0:6,0:6:3.01:0,3,42	0/1:9,1:10:20.65:21,0,78	0/0:35,0:34:9.48:0,9,522	0/1:13,3:16:9.51:56,0,10	1/1:13,3:16:16.61:130,17,0	0/0:12,0:12:24.04:0,24,299	1/1:4,3:7:8.86:79,9,0
chr10	85009235	.	A	ACC	2882.45	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=4.247;DP=416;FS=7.429;HRun=8;HaplotypeScore=76.5260;InbreedingCoeff=0.8892;MQ=89.28;MQ0=0;MQRankSum=-3.701;QD=14.27;ReadPosRankSum=-0.009;VQSLOD=0.8359;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:54.08:0,54,593	1/1:6,0:6:6.01:74,6,0	0/0:24,0:23:48.06:0,48,499	0/0:16,0:16:33.01:0,33,344	0/0:24,0:24:69.19:0,69,769	0/0:14,0:14:27.05:0,27,301	1/1:11,11:25:34.50:333,34,0	0/0:16,0:16:36.07:0,36,391	1/1:11,0:11:21.03:202,21,0	1/1:15,0:16:23.98:210,24,0	1/1:5,0:5:3:28,3,0	1/1:3,2:11:12.03:155,12,0	1/1:1,10:12:17.47:246,17,0	1/1:8,0:8:14.98:159,15,0	1/1:16,0:16:23.99:216,24,0	1/1:3,0:10:9.98:34,10,0	1/1:23,0:23:51.01:487,51,0	0/0:16,0:16:36.08:0,36,401	1/1:3,6:9:15.05:238,15,0	1/1:1,9:11:24:323,24,0	1/1:3,11:14:18.06:285,18,0	1/1:5,0:6:3:29,3,0	0/0:16,0:17:35.83:0,36,380	0/0:29,0:29:72.16:0,72,802	1/1:2,0:7:7.49:26,7,0	0/0:14,0:14:30.07:0,30,334	1/1:5,6:11:5.38:56,5,0	0/0:16,0:16:36.08:0,36,401
chr10	85009243	.	C	CCCG	2985.60	PASS	AB=0.964;AC=26;AF=0.464;AN=56;BaseQRankSum=2.032;DP=385;FS=4.923;HRun=0;HaplotypeScore=81.7061;InbreedingCoeff=0.6726;MQ=89.78;MQ0=0;MQRankSum=-4.564;QD=17.46;ReadPosRankSum=0.242;VQSLOD=3.0338;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:63.12:0,63,927	1/1:0,0:4:6:89,6,0	0/0:21,0:21:56.15:0,56,817	0/0:16,0:16:44.97:0,45,583	0/0:25,0:25:75.23:0,75,1190	0/0:12,0:12:33.06:0,33,488	0/1:24,0:23:37.23:57,0,37	0/0:13,0:13:36.11:0,36,568	1/1:0,8:12:21.07:445,21,0	1/1:3,10:17:38.76:526,39,0	1/1:2,3:7:3.01:69,3,0	1/1:10,0:10:10.43:109,10,0	0/1:13,0:13:10.79:35,0,11	1/1:7,0:7:13.86:166,14,0	1/1:0,9:11:24.08:507,24,0	0/0:8,0:9:14.67:0,15,60	1/1:0,16:22:51.08:961,51,0	0/0:17,0:17:45.04:0,45,663	1/1:7,0:7:10.93:35,11,0	1/1:10,0:10:16.65:68,17,0	0/1:16,0:15:7.01:80,0,7	1/1:5,0:5:3.01:41,3,0	0/0:14,0:14:36.11:0,36,567	0/0:29,0:29:84.18:0,84,1279	0/0:6,0:6:7.11:0,7,25	0/0:12,0:12:33.10:0,33,522	0/1:5,0:6:1.74:2,0,4	0/0:12,0:12:36.12:0,36,597
chr10	85009281	.	G	GCACACACACAC	2045.49	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=5.983;DP=511;FS=9.151;HRun=0;HaplotypeScore=184.9188;InbreedingCoeff=-0.1703;MQ=63.15;MQ0=6;MQRankSum=-7.088;QD=7.96;ReadPosRankSum=-4.963;VQSLOD=0.2394;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:31:84.95:85,0,256	1/1:5,0:5:0.89:2,1,0	0/0:32,0:23:56.24:0,56,814	0/0:35,0:24:69.13:0,69,856	0/0:21,0:22:66.22:0,66,1496	0/0:15,0:17:34.57:0,35,671	0/1:32,0:29:99:231,0,208	0/1:21,0:19:99:357,0,300	0/0:12,0:12:1.22:0,1,37	0/1:7,0:7:28.93:29,0,145	0/1:13,0:12:70.14:74,0,70	0/1:16,0:14:61.09:247,0,61	1/1:10,0:9:13.94:217,14,0	0/0:7,1:19:15.05:0,15,204	0/1:10,0:10:28.92:87,0,29	0/1:19,0:18:38.74:39,0,111	0/1:20,0:18:99:291,0,135	0/0:22,0:26:72.24:0,72,2041	0/1:19,0:18:99:260,0,402	1/1:11,0:10:1.25:3,1,0	0/1:19,0:18:34.63:35,0,148	0/1:13,0:12:30.64:31,0,186	0/0:7,0:7:14.91:0,15,209	0/0:29,0:33:93.32:0,93,2656	0/0:18,0:16:11.68:0,12,118	0/0:17,0:18:48.15:0,48,1039	0/1:10,0:7:24.99:218,0,25	0/0:14,0:15:45.15:0,45,1058
chr10	85010469	.	GTGCGGGA	G	1757.01	PASS	AB=0.708;AC=19;AF=0.365;AN=52;BaseQRankSum=4.616;DP=381;FS=0.000;HRun=0;HaplotypeScore=92.2071;InbreedingCoeff=0.7621;MQ=82.13;MQ0=0;MQRankSum=-6.049;QD=10.16;ReadPosRankSum=0.438;VQSLOD=2.0071;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:30.08:0,30,732	./.	0/0:13,0:13:8.08:0,8,70	0/0:13,0:12:8.56:0,9,55	0/0:10,0:10:9.03:0,9,331	0/0:8,0:8:12.04:0,12,371	1/1:18,14:32:8.98:139,9,0	0/0:11,0:11:2.98:0,3,22	0/0:13,0:13:8.11:0,8,275	0/0:11,0:11:11.77:0,12,148	0/0:6,0:6:5.98:0,6,47	1/1:12,9:21:9.03:189,9,0	1/1:9,5:14:12.04:243,12,0	1/1:5,11:16:18.06:410,18,0	0/0:4,0:4:3.01:0,3,91	1/1:2,1:3:6.02:137,6,0	0/0:18,0:18:14.89:0,15,285	0/0:21,0:21:27.04:0,27,732	1/1:5,7:12:18:255,18,0	1/1:1,2:3:6.02:90,6,0	0/1:30,21:51:0:0,0,0	1/1:1,6:7:9.03:203,9,0	0/0:4,0:4:9.03:0,9,227	0/0:29,0:29:36.11:0,36,1150	1/1:7,7:14:12.04:274,12,0	0/0:15,0:15:24.07:0,24,676	./.	0/0:4,0:4:12.04:0,12,441
chr10	85010620	.	AGCAGTCTC	A	2477.06	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.457;DP=322;FS=5.462;HRun=0;HaplotypeScore=89.6170;InbreedingCoeff=0.9051;MQ=99.44;MQ0=0;MQRankSum=-8.832;QD=52.70;ReadPosRankSum=-0.777;VQSLOD=3.0684;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.20:0,57,2541	1/1:2,3:5:9.03:230,9,0	0/0:12,0:13:33.11:0,33,1305	0/0:23,0:23:66.23:0,66,2736	0/0:5,0:5:15.05:0,15,671	0/0:4,0:4:12.04:0,12,535	0/0:26,0:26:78.27:0,78,3485	0/0:10,0:10:27.09:0,27,1185	1/1:0,6:6:18.06:503,18,0	1/1:1,3:4:9.03:246,9,0	1/1:0,3:3:8.94:79,9,0	0/0:20,0:20:60.21:0,60,2659	0/0:11,0:11:33.11:0,33,1433	0/0:16,0:16:48.16:0,48,2139	1/1:1,5:6:9.03:258,9,0	0/0:5,0:5:15.05:0,15,663	1/1:5,18:23:51.09:1334,51,0	0/0:15,0:15:45.15:0,45,2012	0/0:17,0:17:42.14:0,42,1732	0/0:6,0:6:18.06:0,18,775	0/0:26,0:26:72.25:0,72,3070	0/0:2,0:2:6.02:0,6,266	0/0:5,0:5:15.05:0,15,670	0/0:22,0:22:66.23:0,66,2931	0/0:10,0:10:30.10:0,30,1339	0/0:9,0:9:27.09:0,27,1182	0/0:5,0:5:15.05:0,15,625	0/0:5,0:5:15.05:0,15,667
chr10	85011035	.	GTTT	G	5045.64	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=5.536;DP=530;FS=3.458;HRun=13;HaplotypeScore=85.7741;InbreedingCoeff=0.9460;MQ=73.67;MQ0=1;MQRankSum=-2.815;QD=19.04;ReadPosRankSum=3.490;VQSLOD=4.0678;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:42.01:485,42,0	0/0:4,0:6:15.01:0,15,190	0/0:16,0:11:7.64:0,8,104	0/0:22,0:18:28.93:0,29,362	0/0:16,0:17:36.06:0,36,507	0/0:11,0:11:27.08:0,27,488	1/1:2,0:28:61.74:373,62,0	1/1:6,0:22:34.89:201,35,0	0/0:2,0:8:12.04:0,12,171	0/0:10,0:18:45.07:0,45,561	0/0:4,0:14:39:0,39,518	1/1:4,16:20:35.96:438,36,0	1/1:6,11:17:23.11:280,23,0	1/1:2,16:18:33.10:398,33,0	0/0:8,0:28:42.02:0,42,566	1/1:2,13:15:27.08:325,27,0	0/0:6,0:32:36.11:0,36,510	0/0:22,0:24:72.15:0,72,1186	1/1:7,12:21:12.99:316,13,0	1/1:6,22:28:39.59:681,40,0	1/1:3,4:7:0.83:33,1,0	1/1:3,11:14:32.99:373,33,0	0/0:12,0:12:30.02:0,30,385	0/0:26,0:26:63.08:0,63,980	1/1:4,17:22:43.43:541,43,0	0/0:21,0:22:54.09:0,54,681	1/1:3,28:31:51.04:601,51,0	0/0:9,0:9:27.07:0,27,485
chr10	85011249	.	G	GA	524.47	PASS	AB=0.957;AC=15;AF=0.278;AN=54;BaseQRankSum=3.500;DP=572;FS=2.139;HRun=13;HaplotypeScore=106.1348;InbreedingCoeff=0.0464;MQ=76.81;MQ0=2;MQRankSum=0.737;QD=1.61;ReadPosRankSum=-1.379;VQSLOD=0.0095;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:41:39.51:285,40,0	./.	0/1:34,0:23:3.45:3,0,120	0/1:26,0:10:1.97:2,0,25	0/0:18,0:19:25.69:0,26,170	0/1:13,2:16:12.01:12,0,207	0/0:20,0:20:8.49:0,8,49	1/1:36,1:37:20.67:194,21,0	0/0:14,0:15:21.49:0,21,96	0/0:11,0:10:1.47:0,1,4	0/1:9,0:8:0.02:65,0,0	0/0:12,0:12:1.71:0,2,50	0/1:19,0:19:8.05:8,0,8	0/0:15,0:15:7.88:0,8,54	0/1:28,0:28:7.07:7,0,23	0/1:17,1:18:13.12:13,0,30	0/0:29,0:29:8.99:0,9,34	0/0:22,1:24:16.67:0,17,247	0/1:34,1:34:2.86:3,0,178	0/0:10,0:10:10.15:0,10,40	0/1:13,1:13:17.88:18,0,36	0/0:5,0:5:1.08:0,1,29	0/0:14,2:16:1.87:0,2,154	0/0:34,2:37:69.26:0,69,603	0/0:15,0:15:5.55:0,6,48	0/0:16,0:18:27.70:0,28,174	0/1:32,0:31:4.69:5,0,72	0/1:10,3:14:53.09:53,0,95
chr10	85011258	.	AAAAAC	A	833.31	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-1.546;DP=559;FS=2.909;HRun=0;HaplotypeScore=138.5626;InbreedingCoeff=0.6218;MQ=76.92;MQ0=4;MQRankSum=-0.257;QD=8.68;ReadPosRankSum=-0.429;VQSLOD=2.9134;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:90.73:0,91,1041	0/1:2,0:2:7.74:20,0,8	0/0:41,0:24:16.98:0,17,403	0/0:35,0:16:18.48:0,18,189	0/0:15,0:15:39.09:0,39,843	0/0:17,0:17:45.14:0,45,1036	0/0:16,0:16:39.60:0,40,665	0/0:36,0:36:33.32:0,33,860	1/1:6,9:15:15.05:252,15,0	0/1:8,0:7:15.68:65,0,16	1/1:10,0:9:11.74:125,12,0	0/0:13,0:13:12.04:0,12,205	0/0:19,0:19:30.10:0,30,497	0/0:14,0:14:27.09:0,27,458	1/1:24,1:25:17.70:226,18,0	0/0:16,0:16:32.92:0,33,548	1/1:29,0:29:35.74:268,36,0	0/0:23,0:23:57.13:0,57,1221	0/0:29,0:28:56.96:0,57,698	0/0:13,0:13:1.34:0,1,276	0/0:14,0:13:21.07:0,21,340	0/1:7,0:7:29.86:45,0,30	0/0:13,0:13:27.09:0,27,684	0/0:38,0:38:99:0,99,2356	0/0:12,0:12:21.07:0,21,340	0/0:16,0:16:27.05:0,27,580	0/0:30,0:29:54.34:0,54,909	0/0:13,0:13:21.07:0,21,498
chr10	85011259	.	AAAAC	A	1507.20	PASS	AB=0.980;AC=13;AF=0.232;AN=56;BaseQRankSum=-2.251;DP=564;FS=5.661;HRun=0;HaplotypeScore=127.5952;InbreedingCoeff=0.4736;MQ=76.97;MQ0=4;MQRankSum=-0.783;QD=10.39;ReadPosRankSum=-2.162;VQSLOD=2.6164;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:40:95.54:0,96,675	1/1:2,0:2:4.55:29,5,0	0/0:42,0:25:38.53:0,39,450	0/0:35,0:17:23.87:0,24,220	0/0:15,0:15:42.04:0,42,734	0/0:17,0:17:51.05:0,51,934	0/0:17,0:17:39.07:0,39,486	0/1:35,0:35:24.11:24,0,521	0/1:15,0:15:39.39:137,0,39	0/1:8,1:8:12.51:119,0,13	1/1:8,2:9:18.46:202,18,0	0/0:12,0:12:17.96:0,18,191	0/0:19,0:19:30.06:0,30,374	0/0:14,0:14:29.98:0,30,357	1/1:5,19:24:36.08:520,36,0	0/0:16,0:16:32.38:0,32,391	1/1:3,26:29:38.92:581,39,0	0/0:23,0:23:63.98:0,64,1137	0/0:31,0:30:18.45:0,18,581	0/1:13,0:13:7.41:7,0,207	0/0:15,0:14:23.48:0,23,265	0/1:8,0:8:42.45:57,0,42	0/0:14,0:14:11.17:0,11,610	0/0:38,0:38:99:0,111,2128	0/0:13,0:13:23.96:0,24,267	0/0:15,0:15:34.98:0,35,558	0/0:30,0:29:56.86:0,57,689	0/0:13,0:13:31.59:0,32,463
chr10	85011260	.	A	AAC	3868.99	PASS	AB=0.956;AC=20;AF=0.357;AN=56;BaseQRankSum=6.062;DP=569;FS=7.986;HRun=0;HaplotypeScore=105.8744;InbreedingCoeff=0.5345;MQ=77.00;MQ0=4;MQRankSum=-0.726;QD=14.55;ReadPosRankSum=3.465;VQSLOD=3.3331;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,33:41:48.89:1320,49,0	0/0:2,0:2:6:0,6,51	0/0:42,0:25:46.84:0,47,456	0/0:36,0:18:7.03:0,7,75	0/0:15,0:15:45.03:0,45,494	0/0:17,0:17:50.69:0,51,560	1/1:16,1:17:36.12:209,36,0	1/1:9,25:36:28.11:944,28,0	0/0:15,0:15:26.63:0,27,218	0/0:10,0:9:18.38:0,18,144	0/0:10,0:9:17.63:0,18,92	0/1:12,0:12:26.92:27,0,52	1/1:18,1:19:28.63:189,29,0	0/1:13,1:14:2.14:109,0,2	0/0:23,0:24:37.93:0,38,222	1/1:15,1:16:20.46:157,20,0	0/0:28,0:29:19.17:0,19,180	0/0:23,0:23:46.44:0,46,676	0/1:30,1:31:99:288,0,170	1/1:13,0:13:9.66:113,10,0	0/1:13,1:13:3.35:131,0,3	0/1:8,0:8:27.40:27,0,82	0/0:14,0:14:38.79:0,39,414	0/0:38,0:38:99:0,111,1359	0/1:12,1:13:17.89:116,0,18	0/0:15,0:15:35.95:0,36,395	1/1:29,1:30:4.29:239,4,0	0/0:13,0:13:35.33:0,35,310
chr10	85011262	.	AC	A	2215.61	PASS	AB=0.984;AC=30;AF=0.536;AN=56;BaseQRankSum=9.916;DP=560;FS=15.928;HRun=1;HaplotypeScore=97.9840;InbreedingCoeff=0.2776;MQ=73.67;MQ0=4;MQRankSum=-1.832;QD=6.09;ReadPosRankSum=1.972;VQSLOD=-0.6530;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:39,1:40:69.52:530,70,0	1/1:3,0:3:8.98:74,9,0	0/0:37,1:21:28.33:0,28,346	0/0:35,0:17:10.41:0,10,126	0/0:15,0:15:16.48:0,16,326	0/0:17,0:17:48.92:0,49,457	1/1:17,0:17:3.57:24,4,0	1/1:35,0:35:76.65:462,77,0	0/1:14,1:15:33.35:74,0,33	0/1:8,1:8:9.08:115,0,9	1/1:9,1:9:15.68:113,16,0	0/1:11,0:11:2.78:3,0,26	1/1:19,0:19:3.58:23,4,0	0/1:14,0:14:13.11:13,0,26	1/1:22,2:24:33.81:223,34,0	1/1:16,0:16:3.72:37,4,0	1/1:28,1:29:38.13:228,38,0	0/0:22,0:22:58.89:0,59,605	0/1:33,0:32:81.51:228,0,82	1/1:13,0:13:9.42:74,9,0	0/1:13,0:12:16.26:25,0,16	0/1:8,0:8:11.45:102,0,11	0/0:16,0:16:40.32:0,40,388	0/0:38,1:39:99:0,102,1088	0/1:13,0:13:15.44:21,0,15	0/0:14,0:14:40.91:0,41,366	0/1:29,0:28:15.66:36,0,16	0/1:13,0:13:0.29:0,0,170
chr10	85011263	.	C	CAAA	10292.38	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-7.194;DP=571;FS=2.172;HRun=13;HaplotypeScore=90.2855;InbreedingCoeff=0.8610;MQ=72.84;MQ0=4;MQRankSum=-0.566;QD=36.24;ReadPosRankSum=0.523;VQSLOD=4.8248;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:39,1:40:96.31:1602,96,0	1/1:3,0:3:2.50:21,3,0	0/0:38,0:22:45.43:0,45,475	0/0:34,0:16:3.61:0,4,148	0/0:15,0:15:41.98:0,42,605	0/0:17,0:17:45.14:0,45,654	1/1:3,16:19:39.13:855,39,0	1/1:33,3:36:96.19:1473,96,0	0/0:15,0:16:20.46:0,20,129	0/1:9,0:8:20.82:21,0,52	0/0:10,0:9:6.37:0,6,106	1/1:3,7:12:12.04:252,12,0	1/1:1,18:19:30.10:651,30,0	1/1:2,11:13:27.09:579,27,0	0/0:25,0:25:35.76:0,36,225	1/1:2,14:17:33.07:679,33,0	0/0:30,0:30:33.77:0,34,214	0/0:23,0:23:60.20:0,60,879	1/1:6,26:32:83.64:1374,84,0	1/1:0,13:14:33.04:534,33,0	1/1:2,11:13:21.07:453,21,0	1/1:9,0:9:19.94:187,20,0	0/0:16,0:16:39.08:0,39,515	0/0:37,0:37:99:0,105,1526	1/1:3,11:15:21.07:455,21,0	0/0:14,0:14:39.11:0,39,524	1/1:4,26:30:54.63:1154,55,0	0/0:11,0:11:24.03:0,24,277
chr10	85011605	.	A	AC	8483.84	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-14.554;DP=618;FS=4.395;HRun=6;HaplotypeScore=59.6683;InbreedingCoeff=0.9920;MQ=87.83;MQ0=0;MQRankSum=-2.278;QD=27.46;ReadPosRankSum=-1.432;VQSLOD=4.7337;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,27:36:75.24:942,75,0	0/0:5,0:5:12:0,12,114	0/0:26,0:26:59.31:0,59,579	0/0:17,0:17:42.08:0,42,418	0/0:16,0:16:42.08:0,42,421	0/0:32,0:32:84.17:0,84,850	1/1:9,30:39:66.21:830,66,0	1/1:6,16:22:45.10:533,45,0	0/0:15,0:15:39.08:0,39,398	0/0:22,0:22:54.12:0,54,551	0/0:6,0:6:15.03:0,15,153	1/1:4,25:29:66.21:829,66,0	1/1:1,16:17:42.13:529,42,0	1/1:4,17:21:45.14:566,45,0	0/0:22,0:22:63.12:0,63,635	1/1:0,19:19:48.15:604,48,0	0/0:47,0:47:99:0,135,1377	0/0:34,0:34:99:0,99,985	1/1:5,12:17:33.05:372,33,0	1/1:3,17:20:51.16:639,51,0	1/1:2,37:39:87.28:1094,87,0	1/1:0,16:16:36.12:453,36,0	0/0:6,0:6:18.04:0,18,183	0/0:24,0:24:63.11:0,63,633	1/1:0,11:11:30.10:377,30,0	0/0:26,0:26:60.13:0,60,612	1/1:2,21:23:57.18:717,57,0	0/0:11,0:11:24.05:0,24,245
chr10	85013196	.	GT	G	4992.55	PASS	AB=0.908;AC=40;AF=0.714;AN=56;BaseQRankSum=6.782;DP=466;FS=2.544;HRun=9;HaplotypeScore=65.2019;InbreedingCoeff=0.8006;MQ=88.75;MQ0=8;MQRankSum=0.290;QD=16.37;ReadPosRankSum=2.641;VQSLOD=5.2504;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:54.03:494,54,0	1/1:0,4:4:12.01:110,12,0	0/1:68,1:33:2.66:3,0,220	0/0:57,1:31:1.97:0,2,316	0/0:13,0:13:30.08:0,30,345	0/0:11,0:11:33.09:0,33,372	1/1:0,16:16:35.76:329,36,0	1/1:2,16:18:48:430,48,0	1/1:1,4:5:9:82,9,0	1/1:1,15:16:45.02:412,45,0	1/1:0,6:6:15:137,15,0	1/1:0,13:13:30.02:274,30,0	1/1:1,7:8:17.90:165,18,0	1/1:0,3:3:9:82,9,0	1/1:3,11:14:33.01:302,33,0	1/1:1,13:14:30.02:275,30,0	1/1:0,17:17:39.02:357,39,0	0/0:22,0:22:57.12:0,57,634	1/1:1,8:9:23.99:215,24,0	1/1:1,7:8:20.93:180,21,0	1/1:5,13:20:15.30:314,15,0	1/1:0,10:10:24.01:219,24,0	0/1:5,1:6:9.38:9,0,155	0/0:24,0:24:66.15:0,66,747	1/1:1,8:9:24.01:220,24,0	0/0:17,0:17:45.13:0,45,519	1/1:0,17:17:41.89:384,42,0	0/0:13,0:13:39.10:0,39,434
chr10	85014309	.	CT	C	1735.56	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.337;DP=615;FS=2.312;HRun=7;HaplotypeScore=79.9445;InbreedingCoeff=0.9949;MQ=84.79;MQ0=4;MQRankSum=-0.549;QD=24.79;ReadPosRankSum=2.425;VQSLOD=4.3745;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.27:0,90,1118	0/0:6,0:6:15.05:0,15,189	0/0:67,0:43:55.70:0,56,521	0/0:67,0:48:45.56:0,46,580	0/0:16,0:16:48.14:0,48,591	0/0:23,0:23:63.20:0,63,792	0/0:25,0:25:69.18:0,69,847	0/0:30,0:30:78.19:0,78,935	0/0:12,0:12:36.10:0,36,440	0/0:13,0:13:33.11:0,33,414	0/0:12,0:12:33.10:0,33,410	0/0:30,0:30:84.24:0,84,1028	0/0:13,0:13:39.12:0,39,480	0/0:14,0:14:42.12:0,42,514	0/0:13,0:13:39.10:0,39,465	0/0:21,0:21:54.15:0,54,654	0/0:19,0:19:51.13:0,51,625	0/0:27,0:27:77.46:0,77,949	1/1:1,14:15:42.09:427,42,0	1/1:1,9:10:27.06:275,27,0	1/1:3,25:28:69.16:704,69,0	0/0:19,0:19:54.16:0,54,663	0/0:14,0:14:33.11:0,33,415	0/0:17,0:17:51.15:0,51,627	0/0:23,0:23:50.17:0,50,613	0/0:17,0:17:45.14:0,45,566	1/1:1,16:17:48.11:490,48,0	0/0:13,0:13:36.12:0,36,453
chr10	85014599	.	TCCC	T	4964.28	PASS	AB=0.572;AC=21;AF=0.375;AN=56;BaseQRankSum=-2.495;DP=377;FS=3.315;HRun=9;HaplotypeScore=77.3134;InbreedingCoeff=0.7660;MQ=79.95;MQ0=0;MQRankSum=-2.285;QD=27.13;ReadPosRankSum=0.597;VQSLOD=3.5037;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:29:63.20:893,63,0	0/0:0,0:4:6.54:0,7,20	0/0:15,0:16:35.44:0,35,630	0/0:16,0:14:22.22:0,22,344	0/0:9,0:9:24.08:0,24,497	0/0:8,0:8:21.06:0,21,407	1/1:1,16:17:45.11:616,45,0	1/1:1,19:20:57.15:753,57,0	0/0:4,0:17:25.89:0,26,82	0/1:1,0:14:13.20:13,0,50	0/1:1,0:5:3.22:3,0,27	1/1:0,20:20:42.14:596,42,0	1/1:1,8:9:15.05:213,15,0	1/1:1,15:16:42.61:595,43,0	0/0:1,0:9:17.76:0,18,66	1/1:0,18:18:45.15:638,45,0	0/0:1,0:20:15.25:0,15,68	0/0:25,0:25:75.19:0,75,1435	0/1:4,0:9:25.21:30,0,25	0/0:2,0:8:13.04:0,13,66	0/0:2,0:18:24.93:0,25,111	1/1:4,9:13:24.03:317,24,0	0/0:5,0:6:18.04:0,18,342	0/0:14,0:14:35.81:0,36,765	1/1:1,12:13:21.07:298,21,0	0/0:11,0:11:30.08:0,30,595	0/0:2,0:6:10.43:0,10,36	0/0:7,0:7:21.06:0,21,407
chr10	85015463	.	G	GA	1387.44	PASS	AB=0.909;AC=5;AF=0.089;AN=56;BaseQRankSum=-1.356;DP=533;FS=7.407;HRun=0;HaplotypeScore=90.0854;InbreedingCoeff=0.7345;MQ=89.09;MQ0=2;MQRankSum=-0.554;QD=19.27;ReadPosRankSum=-0.202;VQSLOD=5.2747;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,39:42:95.16:1102,95,0	0/0:3,0:3:8.82:0,9,63	0/0:57,0:31:46.09:0,46,680	0/0:62,1:40:53.94:0,54,640	0/0:9,0:9:24.08:0,24,331	0/0:14,0:14:42.07:0,42,517	0/0:31,0:31:84.65:0,85,457	1/1:5,15:20:14.62:398,15,0	0/0:9,0:9:21.42:0,21,125	0/0:19,0:19:51.22:0,51,258	0/0:10,0:10:26.64:0,27,191	0/0:16,0:16:46.65:0,47,269	0/0:12,0:12:32.76:0,33,207	0/0:11,0:11:26.24:0,26,165	0/0:5,0:5:9.16:0,9,52	0/1:9,1:10:12.62:13,0,84	0/0:45,0:45:99:0,111,638	0/0:34,0:34:99:0,99,1342	0/0:12,0:12:31.33:0,31,166	0/0:7,0:7:20.71:0,21,157	0/0:23,0:23:48.77:0,49,280	0/0:10,0:10:26.65:0,27,168	0/0:8,0:8:21.06:0,21,274	0/0:18,0:18:54.18:0,54,753	0/0:8,0:8:23.01:0,23,128	0/0:12,0:12:33.10:0,33,446	0/0:11,0:11:27.78:0,28,162	0/0:13,0:13:39.10:0,39,510
chr10	85015564	.	TA	T	6765.14	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=10.365;DP=490;FS=3.711;HRun=8;HaplotypeScore=53.4376;InbreedingCoeff=0.9724;MQ=70.94;MQ0=0;MQRankSum=0.321;QD=24.69;ReadPosRankSum=0.686;VQSLOD=5.5955;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,35:38:99:956,99,0	1/1:1,7:8:21.03:203,21,0	0/0:10,0:11:14.63:0,15,147	0/0:11,0:11:23.54:0,24,240	0/0:9,0:9:18.04:0,18,205	0/0:23,0:23:60.18:0,60,725	1/1:3,34:37:90.13:869,90,0	1/1:3,16:19:48.03:450,48,0	1/1:1,12:13:33.05:319,33,0	1/1:0,14:14:42.07:405,42,0	1/1:1,5:6:15.02:145,15,0	1/1:4,23:27:69.11:666,69,0	1/1:0,14:14:39.06:377,39,0	1/1:3,16:19:44.86:434,45,0	1/1:1,10:11:27.04:261,27,0	1/1:2,12:14:33.05:319,33,0	1/1:2,40:42:99:1043,108,0	0/0:32,0:32:84.23:0,84,999	0/0:19,0:19:54.16:0,54,642	0/0:7,0:7:15.05:0,15,181	0/0:21,0:21:60.18:0,60,725	1/1:0,2:2:6.01:58,6,0	0/0:8,0:8:18.04:0,18,204	0/0:33,0:33:93.28:0,93,1112	1/1:1,9:10:27.04:261,27,0	0/0:18,1:19:19.17:0,19,500	0/0:17,0:17:51.14:0,51,604	0/0:6,0:6:15.05:0,15,181
chr10	85015819	.	TCC	T	2619.67	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=3.359;DP=307;FS=4.924;HRun=10;HaplotypeScore=62.9638;InbreedingCoeff=0.8726;MQ=82.64;MQ0=0;MQRankSum=-1.164;QD=22.78;ReadPosRankSum=4.645;VQSLOD=3.0059;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:8:6.02:0,6,94	1/1:0,3:3:9.02:100,9,0	0/0:14,0:11:1.85:0,2,151	0/0:20,0:18:32.60:0,33,396	0/0:6,0:7:17.53:0,18,222	0/0:10,0:10:21.04:0,21,284	0/0:11,0:13:27.02:0,27,281	0/0:5,0:16:26.04:0,26,108	1/1:0,12:12:33.09:367,33,0	1/1:6,4:10:14.99:156,15,0	1/1:2,4:6:12.03:133,12,0	0/0:11,0:11:21.54:0,22,316	0/0:7,0:7:15.49:0,15,192	0/0:9,0:9:18.06:0,18,286	1/1:5,16:21:48.13:535,48,0	0/0:15,1:16:5.34:0,5,479	1/1:3,18:21:45.11:502,45,0	0/0:11,0:11:27.08:0,27,402	1/1:1,4:5:9.01:100,9,0	1/1:0,6:6:12.03:133,12,0	1/1:3,11:14:33.08:368,33,0	0/0:3,0:3:6.02:0,6,95	0/0:4,0:4:9.01:0,9,119	0/0:22,0:22:51.10:0,51,704	0/0:4,0:4:11.94:0,12,137	0/0:10,0:10:21.47:0,21,254	1/1:3,14:17:39.09:434,39,0	0/0:7,0:7:18.06:0,18,286
chr10	85015976	.	T	TG	1927.27	PASS	AB=0.625;AC=21;AF=0.375;AN=56;BaseQRankSum=-3.647;DP=306;FS=2.623;HRun=9;HaplotypeScore=38.9919;InbreedingCoeff=0.8307;MQ=79.39;MQ0=0;MQRankSum=-0.881;QD=18.18;ReadPosRankSum=0.086;VQSLOD=3.2741;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:35.96:0,36,307	1/1:1,3:4:12.03:132,12,0	0/0:14,0:13:26.11:0,26,200	0/0:12,0:11:9.60:0,10,57	0/0:9,0:9:20.96:0,21,174	0/0:14,0:14:32.96:0,33,282	1/1:6,12:19:19.05:429,19,0	0/0:16,0:16:17.98:0,18,156	1/1:0,9:9:24.06:265,24,0	1/1:3,6:9:18.05:199,18,0	1/1:2,1:3:9.02:93,9,0	0/0:16,0:16:32.98:0,33,282	0/0:4,0:4:3:0,3,26	0/0:8,0:8:21:0,21,182	1/1:4,7:11:24.02:252,24,0	0/0:7,0:7:14.99:0,15,130	0/1:4,6:10:14.02:88,0,14	0/0:7,0:7:21:0,21,182	1/1:5,8:13:18.92:190,19,0	1/1:2,3:5:9.02:100,9,0	1/1:5,5:10:9.50:100,9,0	0/0:7,0:7:18:0,18,156	0/0:11,0:11:29.99:0,30,260	0/0:12,0:12:26.98:0,27,234	0/0:15,0:15:32.97:0,33,286	0/0:24,1:25:5.79:0,6,278	1/1:3,10:13:27.06:290,27,0	0/0:5,0:5:9:0,9,78
chr10	85016462	.	C	CG	2731.35	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-5.325;DP=432;FS=7.628;HRun=7;HaplotypeScore=50.7093;InbreedingCoeff=0.9495;MQ=76.37;MQ0=0;MQRankSum=-1.116;QD=21.85;ReadPosRankSum=-1.690;VQSLOD=2.5150;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:61.39:0,61,757	0/0:9,0:9:27.01:0,27,253	0/0:14,0:14:26.79:0,27,232	0/0:14,0:14:2.50:0,2,161	0/0:16,0:16:33.04:0,33,318	0/0:28,0:28:72.11:0,72,695	0/0:25,0:25:69.11:0,69,664	0/0:16,2:18:24.01:0,24,231	0/0:16,0:16:45.07:0,45,434	0/0:11,0:11:24.03:0,24,231	0/0:7,0:7:15.02:0,15,144	1/1:2,12:14:30.09:362,30,0	1/1:1,11:12:27.07:315,27,0	1/1:4,14:18:42.13:507,42,0	0/0:15,0:15:33.02:0,33,313	1/1:2,0:5:8.63:44,9,0	0/0:32,0:32:75.11:0,75,724	0/0:13,0:13:30.04:0,30,290	1/1:5,15:20:45.10:516,45,0	1/1:2,6:8:18.06:217,18,0	1/1:6,12:18:24.07:290,24,0	1/1:2,7:9:21.06:254,21,0	0/0:10,0:10:30.05:0,30,290	0/0:23,0:23:54.08:0,54,521	1/1:0,2:8:11.63:80,12,0	0/0:18,0:18:42.06:0,42,405	1/1:0,13:13:30.09:362,30,0	0/0:5,0:5:15.02:0,15,145
chr10	85019810	.	G	GACAC	3428.59	PASS	AB=0.933;AC=37;AF=0.740;AN=50;BaseQRankSum=6.401;DP=527;FS=4.153;HRun=0;HaplotypeScore=138.4750;InbreedingCoeff=0.6388;MQ=61.23;MQ0=6;MQRankSum=-6.453;QD=9.24;ReadPosRankSum=-2.138;VQSLOD=2.8159;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:33:5.75:83,6,0	1/1:7,0:9:8.77:134,9,0	./.	./.	0/0:21,0:24:32.19:0,32,467	0/1:27,0:29:2.10:2,0,385	0/1:18,1:20:0.47:0,0,109	1/1:20,0:18:3.01:39,3,0	1/1:6,0:9:14.78:197,15,0	1/1:15,0:15:12.51:177,13,0	./.	1/1:22,0:25:15.05:258,15,0	1/1:7,0:10:9.03:141,9,0	1/1:16,0:16:9.01:130,9,0	1/1:9,2:17:23.82:444,24,0	1/1:20,0:28:33.11:571,33,0	1/1:17,4:23:20.76:352,21,0	0/0:21,0:22:24.05:0,24,425	1/1:13,0:13:6.02:110,6,0	1/1:16,2:19:3.01:71,3,0	1/1:13,0:21:2.74:12,3,0	1/1:8,0:10:6.02:104,6,0	0/1:9,0:12:0.45:0,0,91	0/0:29,0:33:42.59:0,43,594	1/1:14,0:17:9.03:156,9,0	0/0:24,0:25:20.17:0,20,280	1/1:9,3:19:26.72:446,27,0	0/0:7,0:8:9.01:0,9,102
chr10	85020015	.	GT	G	4958.47	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=7.877;DP=523;FS=3.681;HRun=10;HaplotypeScore=60.7649;InbreedingCoeff=0.9484;MQ=73.45;MQ0=1;MQRankSum=-1.009;QD=19.37;ReadPosRankSum=1.480;VQSLOD=5.8475;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:32:77.51:669,78,0	1/1:1,3:4:9:78,9,0	0/0:19,0:15:8.87:0,9,179	0/0:23,0:21:32.07:0,32,294	0/0:20,0:21:50.96:0,51,535	0/0:16,1:17:19.08:0,19,438	1/1:3,20:23:53.98:469,54,0	1/1:4,20:24:59.75:500,60,0	1/1:1,11:11:26.99:234,27,0	1/1:2,14:16:38.97:338,39,0	1/1:1,10:11:20.97:182,21,0	0/0:23,0:23:54.02:0,54,556	0/0:6,0:6:18.03:0,18,190	0/0:11,0:12:35.93:0,36,379	1/1:2,16:18:44.99:391,45,0	0/0:20,0:20:45.12:0,45,498	1/1:6,27:33:74.01:630,74,0	0/0:30,0:30:72.19:0,72,793	1/1:9,16:25:31.51:416,32,0	1/1:3,13:16:32.92:279,33,0	1/1:1,15:17:26.11:304,26,0	0/0:11,0:11:24.05:0,24,257	0/0:11,0:11:27.03:0,27,285	0/0:26,1:27:43.10:0,43,686	0/0:8,1:9:0.95:0,1,224	0/0:23,0:23:54.09:0,54,577	1/1:3,21:24:53.97:469,54,0	0/0:15,0:15:45.07:0,45,469
chr10	85020482	.	TA	T	4191.42	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.565;DP=636;FS=5.942;HRun=9;HaplotypeScore=65.5112;InbreedingCoeff=0.9966;MQ=73.93;MQ0=0;MQRankSum=-2.752;QD=22.78;ReadPosRankSum=0.848;VQSLOD=4.6075;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,33:39:81.01:741,81,0	0/0:6,0:6:18.05:0,18,208	0/0:14,0:14:18.05:0,18,203	0/0:10,0:10:27.07:0,27,300	0/0:20,0:20:60.16:0,60,678	0/0:25,0:26:72:0,72,796	0/0:19,0:19:51.15:0,51,589	1/1:3,23:26:69:622,69,0	0/0:29,1:30:50.97:0,51,838	0/0:35,1:36:68.82:0,69,1046	0/0:18,0:18:48.14:0,48,546	1/1:0,10:10:27.01:247,27,0	1/1:2,16:18:45.02:412,45,0	1/1:2,22:24:60.03:549,60,0	0/0:24,0:24:66.15:0,66,747	1/1:5,23:28:66.03:604,66,0	0/0:26,0:26:72.20:0,72,820	0/0:18,1:19:23.68:0,24,526	0/0:18,0:18:45.13:0,45,519	0/0:28,0:28:84.25:0,84,969	0/0:29,0:29:84.21:0,84,955	1/1:2,19:21:57.03:522,57,0	0/0:23,0:23:66.18:0,66,750	0/0:21,0:21:54.16:0,54,623	1/1:0,18:18:54.03:494,54,0	0/0:28,0:28:75.21:0,75,858	0/0:34,0:34:93.25:0,93,1061	0/0:23,0:23:63.17:0,63,716
chr10	85021028	.	TTCTC	T	652.05	PASS	AB=0.951;AC=21;AF=0.389;AN=54;BaseQRankSum=5.544;DP=551;FS=25.712;HRun=0;HaplotypeScore=94.1931;InbreedingCoeff=0.3833;MQ=73.26;MQ0=8;MQRankSum=-3.388;QD=2.69;ReadPosRankSum=1.592;VQSLOD=-0.1229;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,3:31:7.98:0,8,83	1/1:7,0:8:6.01:56,6,0	./.	0/0:29,0:16:0.47:0,0,1	0/1:24,1:25:34.10:34,0,151	0/1:20,0:21:0.81:1,0,244	0/1:19,2:21:34.19:34,0,56	0/0:43,0:42:11.97:0,12,104	1/1:11,1:13:9.02:114,9,0	1/1:18,0:18:6.48:56,6,0	1/1:12,0:14:3.01:38,3,0	0/1:31,1:31:31.61:32,0,111	0/0:17,0:17:15.04:0,15,245	1/1:10,0:16:5.69:55,6,0	1/1:10,0:19:18.02:167,18,0	0/0:8,0:20:6.02:0,6,102	0/0:23,0:23:3.21:0,3,13	0/1:20,1:21:19.29:19,0,404	0/0:17,0:16:3:0,3,26	1/1:12,2:14:6.02:75,6,0	0/0:9,0:9:5.69:0,6,30	0/0:13,0:13:6.02:0,6,87	0/0:15,0:17:9.03:0,9,175	0/0:19,0:19:33.10:0,33,521	0/0:16,0:16:12.02:0,12,151	0/0:16,0:16:9.02:0,9,115	1/1:15,4:19:8.96:139,9,0	0/0:12,0:10:14.96:0,15,142
chr10	85021238	.	T	TCA	407.47	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.418;DP=609;FS=1.231;HRun=0;HaplotypeScore=73.4787;InbreedingCoeff=0.8904;MQ=75.24;MQ0=0;MQRankSum=-0.811;QD=29.10;ReadPosRankSum=2.236;VQSLOD=5.2424;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,1474	0/0:5,0:5:15.04:0,15,177	0/0:32,0:30:62.46:0,62,716	0/0:34,0:32:44.80:0,45,540	0/0:21,0:21:63.19:0,63,788	1/1:2,12:14:30.10:502,30,0	0/0:26,0:26:66.18:0,66,809	0/0:36,0:36:74.97:0,75,928	0/0:21,0:21:57.17:0,57,708	0/0:17,0:17:39.12:0,39,486	0/0:14,0:14:33.08:0,33,395	0/0:24,0:24:63.16:0,63,783	0/0:20,0:20:54.16:0,54,673	0/0:20,0:20:51.12:0,51,619	0/0:26,0:26:69.22:0,69,874	0/0:18,0:18:44.63:0,45,544	0/0:25,0:25:72.23:0,72,916	0/0:13,0:13:36.12:0,36,458	0/0:16,0:16:36.11:0,36,458	0/0:21,0:21:54.15:0,54,661	0/0:53,0:53:99:0,147,1858	0/0:15,0:15:36.11:0,36,458	0/0:25,0:25:63.20:0,63,798	0/0:29,0:29:81.23:0,81,1003	0/0:12,0:12:30.06:0,30,365	0/0:12,0:12:30.10:0,30,382	0/0:13,0:13:39.12:0,39,497	0/0:5,0:5:6.02:0,6,76
chr10	85021399	.	AC	A	2258.64	PASS	AB=0.846;AC=23;AF=0.411;AN=56;BaseQRankSum=0.168;DP=378;FS=8.187;HRun=9;HaplotypeScore=55.8171;InbreedingCoeff=0.7646;MQ=96.53;MQ0=1;MQRankSum=-1.152;QD=11.02;ReadPosRankSum=2.123;VQSLOD=2.0314;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:45.13:0,45,509	1/1:1,2:3:9:82,9,0	0/1:43,0:33:15.17:15,0,313	0/1:26,0:22:4.41:4,0,206	0/0:19,0:19:38.97:0,39,392	0/0:9,0:9:27.05:0,27,291	1/1:5,11:16:33.01:301,33,0	0/0:10,0:10:18.03:0,18,187	1/1:3,9:12:24.01:219,24,0	1/1:5,10:15:29.99:273,30,0	1/1:4,2:6:12:107,12,0	0/0:5,0:14:9.44:0,9,45	0/0:2,0:10:11.52:0,12,64	0/0:13,0:13:27.02:0,27,211	1/1:3,7:10:18.01:164,18,0	0/0:10,0:10:24.05:0,24,261	0/1:1,6:7:13.60:143,0,14	0/0:9,0:9:27.05:0,27,298	1/1:7,9:16:26.89:235,27,0	1/1:4,7:11:27.01:245,27,0	1/1:4,13:17:27:247,27,0	0/0:5,0:5:9.75:0,10,62	0/0:9,0:9:21.05:0,21,234	0/0:14,0:14:36.10:0,36,408	0/0:11,0:11:24.07:0,24,277	0/0:12,0:12:21.05:0,21,234	1/1:7,15:22:48.02:435,48,0	0/0:7,0:7:18.04:0,18,197
chr10	85021927	.	AC	A	660.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.636;DP=459;FS=3.369;HRun=1;HaplotypeScore=52.8150;InbreedingCoeff=0.9915;MQ=84.73;MQ0=0;MQRankSum=-2.963;QD=34.75;ReadPosRankSum=-0.256;VQSLOD=3.2718;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.24:0,69,1101	0/0:11,0:11:33.11:0,33,526	0/0:11,1:12:33.11:0,33,527	0/0:17,0:17:42.14:0,42,652	0/0:16,0:16:48.16:0,48,766	0/0:21,0:21:63.13:0,63,969	1/1:0,19:19:54.18:755,54,0	0/0:21,0:21:60.02:0,60,815	0/0:10,0:10:30.10:0,30,479	0/0:16,0:16:48.16:0,48,765	0/0:8,0:8:24.08:0,24,378	0/0:14,0:14:42.14:0,42,671	0/0:18,0:18:54.18:0,54,854	0/0:19,0:19:57.19:0,57,898	0/0:12,0:12:36.12:0,36,572	0/0:15,0:15:45.15:0,45,718	0/0:26,0:26:78.23:0,78,1206	0/0:35,0:35:99:0,99,1580	0/0:14,0:14:42.14:0,42,670	0/0:8,0:8:24.08:0,24,383	0/0:29,0:29:81.28:0,81,1293	0/0:9,0:9:27.06:0,27,400	0/0:8,0:8:24.04:0,24,355	0/0:18,0:18:54.18:0,54,861	0/0:20,0:20:60.18:0,60,929	0/0:13,0:13:36.11:0,36,552	0/0:13,0:13:39.13:0,39,615	0/0:14,0:14:42.06:0,42,558
chr10	85022059	.	CTT	C	1871.34	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=3.687;DP=445;FS=7.217;HRun=13;HaplotypeScore=68.4852;InbreedingCoeff=0.9440;MQ=77.69;MQ0=0;MQRankSum=-1.697;QD=19.91;ReadPosRankSum=1.552;VQSLOD=2.8823;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:39.13:0,39,564	1/1:0,6:6:15.02:145,15,0	0/0:18,0:16:22.86:0,23,204	0/0:6,0:5:6:0,6,66	0/0:21,0:22:62.69:0,63,854	0/0:21,0:23:68.67:0,69,893	1/1:1,12:13:24.03:233,24,0	0/0:21,0:21:17.11:0,17,506	1/1:1,11:14:17.69:207,18,0	1/1:3,15:18:42.02:407,42,0	1/1:1,14:15:42.05:405,42,0	0/0:13,0:15:41.61:0,42,554	0/0:8,0:8:24.08:0,24,347	0/0:14,0:14:42.09:0,42,549	1/1:1,10:11:24.03:233,24,0	0/0:11,0:14:35.08:0,35,419	1/1:1,16:17:45.06:436,45,0	0/0:39,0:39:99:0,107,1460	0/0:6,1:21:41.91:0,42,199	0/0:2,0:18:40:0,40,147	0/0:2,0:4:4.99:0,5,17	0/0:15,1:17:12.48:0,12,446	0/0:12,0:12:30.10:0,30,434	0/0:7,0:9:17.54:0,18,201	0/0:21,0:22:54.18:0,54,766	0/0:24,1:27:39.60:0,40,860	0/0:4,1:19:30.33:0,30,137	0/0:7,0:7:21.07:0,21,304
chr10	85022771	.	T	TGG	4124.03	PASS	AB=0.920;AC=15;AF=0.268;AN=56;BaseQRankSum=-8.511;DP=526;FS=12.055;HRun=8;HaplotypeScore=70.4306;InbreedingCoeff=0.8958;MQ=80.90;MQ0=0;MQRankSum=-0.006;QD=26.78;ReadPosRankSum=-1.416;VQSLOD=1.7631;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.06:0,84,903	1/1:3,4:8:20.99:273,21,0	0/1:21,0:23:12.96:13,0,214	0/0:21,0:21:9.65:0,10,320	0/0:30,0:31:74.90:0,75,802	0/0:13,0:13:36.09:0,36,401	1/1:9,27:37:62.70:961,63,0	0/0:29,0:30:72.11:0,72,847	1/1:6,17:23:49.98:767,50,0	1/1:4,5:9:15.05:238,15,0	1/1:5,8:14:20.56:294,21,0	0/0:22,0:22:57.14:0,57,635	0/0:8,0:8:21.05:0,21,234	0/0:16,0:16:36.08:0,36,399	1/1:2,18:20:54.18:856,54,0	0/0:21,0:21:54.14:0,54,602	1/1:3,16:20:47.65:723,48,0	0/0:20,0:20:51.13:0,51,568	0/0:13,0:13:27.04:0,27,300	0/0:17,0:17:39.10:0,39,432	0/0:26,0:26:63.16:0,63,702	0/0:11,0:11:30.07:0,30,334	0/0:7,0:7:15.04:0,15,166	0/0:18,0:18:45.11:0,45,501	0/0:14,0:14:39.06:0,39,410	0/0:19,0:19:48.11:0,48,525	0/0:25,0:24:57.10:0,57,624	0/0:8,0:8:21.06:0,21,234
chr10	85023291	.	A	AGG	1349.81	PASS	AB=0.849;AC=13;AF=0.232;AN=56;BaseQRankSum=3.139;DP=489;FS=1.175;HRun=1;HaplotypeScore=68.2154;InbreedingCoeff=0.6769;MQ=59.59;MQ0=18;MQRankSum=2.340;QD=8.44;ReadPosRankSum=3.142;VQSLOD=0.5747;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:25.52:0,26,262	0/1:5,0:5:6.41:6,0,36	0/0:35,0:13:0.23:0,0,229	0/1:48,0:18:7.18:7,0,225	0/0:12,0:11:20.79:0,21,156	0/0:15,0:15:12.34:0,12,205	0/0:20,0:20:26.84:0,27,207	0/0:15,0:11:15.92:0,16,183	0/0:7,0:7:9.45:0,9,74	0/0:13,0:13:37.46:0,37,334	0/0:11,0:11:20.98:0,21,175	1/1:22,0:22:37.24:429,37,0	1/1:15,0:15:27.81:221,28,0	1/1:15,0:15:32.59:260,33,0	0/0:16,0:16:29.95:0,30,247	0/1:4,18:23:9.70:104,0,10	0/0:23,0:23:33.94:0,34,325	0/0:13,0:13:23.93:0,24,192	0/0:11,0:11:33.01:0,33,300	0/0:13,0:13:29.56:0,30,225	0/0:12,0:12:29.85:0,30,231	1/1:23,0:23:35.31:386,35,0	0/0:13,0:13:29.95:0,30,247	0/0:28,0:27:41.60:0,42,337	1/1:9,0:9:14.89:114,15,0	0/0:22,0:22:56.18:0,56,537	0/0:11,0:11:21.44:0,21,174	0/0:14,0:14:29.31:0,29,236
chr10	85024656	.	G	GA	1635.85	PASS	AB=0.576;AC=7;AF=0.125;AN=56;BaseQRankSum=-7.096;DP=515;FS=3.993;HRun=9;HaplotypeScore=67.8388;InbreedingCoeff=0.7964;MQ=71.04;MQ0=0;MQRankSum=-0.545;QD=20.45;ReadPosRankSum=-1.485;VQSLOD=3.8103;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:47.97:0,48,416	0/0:6,0:6:11.97:0,12,99	0/0:25,0:22:27.70:0,28,181	0/0:10,0:9:14.99:0,15,130	0/0:11,0:11:32.98:0,33,283	0/0:25,0:25:65.97:0,66,573	0/0:19,0:18:43.76:0,44,362	0/0:30,0:27:62.94:0,63,537	0/0:13,0:12:23.97:0,24,209	0/0:14,0:14:35.98:0,36,312	0/0:10,0:10:26.99:0,27,234	0/0:12,0:12:26.99:0,27,234	0/0:19,0:18:44.97:0,45,390	0/0:11,0:10:23.99:0,24,207	0/0:32,0:29:77.95:0,78,669	0/0:22,0:22:53.98:0,54,467	0/0:30,0:29:74.98:0,75,651	0/0:25,3:27:1.91:0,2,457	1/1:1,16:17:45.11:488,45,0	1/1:7,19:26:28.02:512,28,0	1/1:2,16:16:36.10:399,36,0	0/0:17,0:17:41.97:0,42,361	0/0:9,0:10:29.03:0,29,240	0/0:32,0:33:89.02:0,89,761	0/0:11,0:11:29.99:0,30,260	0/0:16,0:16:21.47:0,21,341	0/1:5,14:19:6.98:385,0,7	0/0:11,0:11:20.95:0,21,182
chr10	85025769	.	G	GA	16800.31	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-14.979;DP=592;FS=13.089;HRun=0;HaplotypeScore=54.4959;InbreedingCoeff=0.9810;MQ=78.93;MQ0=0;MQRankSum=-1.436;QD=40.00;ReadPosRankSum=2.639;VQSLOD=4.2129;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:99:1566,105,0	1/1:0,7:7:18.06:269,18,0	0/0:18,0:19:48.91:0,49,596	0/0:17,0:17:14.86:0,15,373	0/0:18,0:18:54.17:0,54,735	0/0:24,0:24:72.21:0,72,956	1/1:0,26:26:69.23:1029,69,0	1/1:0,24:24:69.20:977,69,0	1/1:0,19:19:45.15:673,45,0	1/1:0,26:26:72.21:1035,72,0	1/1:1,17:18:6.53:629,7,0	1/1:1,29:30:75.25:1122,75,0	1/1:0,27:27:81.27:1209,81,0	1/1:0,20:20:60.20:897,60,0	1/1:0,26:26:72.24:1077,72,0	1/1:0,21:21:63.21:943,63,0	1/1:0,25:25:60.20:898,60,0	0/0:21,0:21:63.20:0,63,863	1/1:1,14:15:42.13:609,42,0	1/1:0,14:14:39.08:557,39,0	1/1:1,26:27:75.25:1122,75,0	1/1:0,29:29:75.25:1122,75,0	0/0:20,0:20:60.16:0,60,773	0/0:26,0:26:75.20:0,75,964	1/1:1,10:11:24.08:349,24,0	0/0:12,0:12:33.11:0,33,460	1/1:0,17:17:48.16:718,48,0	0/0:15,0:15:45.12:0,45,593
chr10	85026538	.	GCA	G	205.20	PASS	AB=0.972;AC=10;AF=0.179;AN=56;BaseQRankSum=6.920;DP=488;FS=19.037;HRun=0;HaplotypeScore=107.4312;InbreedingCoeff=-0.0520;MQ=72.47;MQ0=1;MQRankSum=0.517;QD=1.25;ReadPosRankSum=5.900;VQSLOD=0.2100;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:28:16.75:17,0,129	0/0:12,0:11:24.87:0,25,128	0/0:14,0:13:16.19:0,16,251	0/0:14,0:13:20.33:0,20,236	0/0:14,0:14:38.76:0,39,519	0/0:19,0:20:56.86:0,57,796	0/1:27,0:27:36.11:36,0,108	0/1:16,0:15:4.61:5,0,115	0/0:14,0:13:24.76:0,25,130	0/0:19,0:17:29.97:0,30,187	0/0:13,0:13:8.63:0,9,78	0/1:8,1:9:34.16:34,0,61	0/1:15,0:15:30.34:30,0,65	0/1:21,0:20:13.87:14,0,158	0/0:15,0:15:26.88:0,27,149	1/1:15,1:16:3.31:88,3,0	0/0:34,0:34:64.16:0,64,298	0/0:31,0:30:66.78:0,67,554	0/1:13,1:12:8.53:9,0,128	0/0:16,0:16:5.81:0,6,152	0/0:9,0:10:1.14:0,1,43	0/0:15,0:14:10.50:0,11,128	0/0:9,0:9:26.85:0,27,312	0/0:23,0:23:68.87:0,69,838	0/0:19,0:19:9.47:0,9,239	0/0:21,0:21:62.74:0,63,824	0/1:16,1:17:13.44:109,0,13	0/0:9,0:9:23.92:0,24,210
chr10	85026539	.	CAA	C	3940.09	PASS	AB=0.671;AC=36;AF=0.643;AN=56;BaseQRankSum=9.288;DP=499;FS=10.759;HRun=15;HaplotypeScore=96.8938;InbreedingCoeff=0.8243;MQ=73.72;MQ0=2;MQRankSum=-3.249;QD=11.98;ReadPosRankSum=5.461;VQSLOD=1.7743;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,20:28:38.43:372,38,0	1/1:3,0:11:19.20:82,19,0	0/0:16,0:14:15.45:0,15,255	0/0:18,0:15:26.94:0,27,285	0/0:14,0:15:29.58:0,30,371	0/0:17,0:20:47.11:0,47,551	1/1:5,21:27:44.77:441,45,0	1/1:4,11:14:29.87:259,30,0	1/1:2,0:13:30.16:130,30,0	1/1:4,0:16:30.13:130,30,0	1/1:4,0:13:24.66:106,25,0	1/1:2,5:8:8.85:123,9,0	1/1:4,11:15:24.32:212,24,0	1/1:7,13:19:29.88:264,30,0	1/1:5,0:15:15.37:69,15,0	1/1:2,14:16:41.97:369,42,0	1/1:4,0:33:60.31:260,60,0	0/0:9,1:31:51.25:0,51,262	0/1:7,6:13:16.24:132,0,16	1/1:7,9:16:26.87:231,27,0	1/1:3,7:10:14.94:132,15,0	1/1:5,9:14:14.77:176,15,0	0/0:10,0:10:24.06:0,24,295	0/0:22,0:23:50.63:0,51,628	0/1:11,9:20:27.61:135,0,28	0/0:24,0:25:60.12:0,60,846	1/1:2,15:17:35.96:317,36,0	0/0:5,0:10:15.96:0,16,81
chr10	85027107	.	AT	A	1046.37	PASS	AB=0.923;AC=5;AF=0.089;AN=56;BaseQRankSum=5.593;DP=499;FS=8.555;HRun=10;HaplotypeScore=53.8202;InbreedingCoeff=0.7789;MQ=74.93;MQ0=0;MQRankSum=2.329;QD=16.10;ReadPosRankSum=-1.141;VQSLOD=3.0274;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:58.39:655,58,0	0/0:6,0:6:15.01:0,15,153	0/0:19,0:18:38.03:0,38,357	0/1:11,1:11:7.13:7,0,113	0/0:20,0:20:22.61:0,23,463	0/0:21,1:22:34.11:0,34,604	0/0:25,0:25:60.16:0,60,663	1/1:3,20:23:59.94:511,60,0	0/0:22,0:22:60.14:0,60,654	0/0:14,1:14:10.04:0,10,337	0/0:8,0:8:20.93:0,21,203	0/0:23,2:26:42.97:0,43,685	0/0:14,0:14:27.07:0,27,299	0/0:16,0:16:45.12:0,45,497	0/0:16,0:16:19.08:0,19,430	0/0:12,0:12:33.09:0,33,365	0/0:43,0:43:94.26:0,94,1244	0/0:20,0:20:48.13:0,48,530	0/0:24,0:24:57.14:0,57,622	0/0:14,0:14:42.10:0,42,456	0/0:19,0:19:51.13:0,51,556	0/0:17,0:17:45.11:0,45,488	0/0:12,0:12:36.10:0,36,396	0/0:10,0:10:30.08:0,30,332	0/0:14,0:14:39.10:0,39,424	0/0:8,0:8:24.06:0,24,265	0/0:26,0:26:69.18:0,69,755	0/0:6,0:6:18.01:0,18,180
chr10	85027184	.	GGGGCTCTTA	G	1567.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.475;DP=646;FS=2.866;HRun=0;HaplotypeScore=183.6451;InbreedingCoeff=0.9839;MQ=84.68;MQ0=0;MQRankSum=-3.504;QD=60.29;ReadPosRankSum=-3.675;VQSLOD=2.5999;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,5672	0/0:5,0:5:15.05:0,15,596	0/0:27,0:27:75.22:0,75,3033	0/0:28,0:26:71.68:0,72,3024	0/0:26,0:26:78.27:0,78,3521	0/0:19,0:19:54.19:0,54,2442	0/0:26,0:26:78.27:0,78,3724	1/1:4,22:26:66.19:1663,66,0	0/0:23,0:23:69.24:0,69,3000	0/0:27,0:27:79.51:0,80,3573	0/0:19,0:19:54.19:0,54,2474	0/0:24,0:24:69.22:0,69,3140	0/0:22,0:22:66.23:0,66,3047	0/0:24,0:24:72.25:0,72,3266	0/0:34,0:34:99:0,102,4546	0/0:13,0:13:36.11:0,36,1465	0/0:38,0:38:99:0,111,5255	0/0:20,0:20:60.21:0,60,2823	0/0:22,0:22:66.23:0,66,2963	0/0:22,0:22:60.21:0,60,2636	0/0:26,0:26:75.26:0,75,3554	0/0:13,0:13:39.13:0,39,1851	0/0:13,0:13:36.12:0,36,1675	0/0:24,0:24:72.25:0,72,3397	0/0:16,0:16:42.14:0,42,2022	0/0:22,0:22:66.23:0,66,3037	0/0:31,0:31:93.32:0,93,4196	0/0:11,0:11:33.11:0,33,1487
chr10	85027749	.	TACTCAAG	T	4477.45	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.463;DP=688;FS=3.878;HRun=0;HaplotypeScore=158.3042;InbreedingCoeff=0.9975;MQ=80.79;MQ0=0;MQRankSum=-12.526;QD=55.28;ReadPosRankSum=-0.788;VQSLOD=4.5093;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,184,7104	0/0:16,0:16:48.16:0,48,1882	0/0:15,0:15:36.12:0,36,1319	0/0:24,0:24:60.68:0,61,2168	0/0:19,0:19:57.20:0,57,2279	0/0:21,0:21:63.22:0,63,2481	0/0:32,0:32:96.32:0,96,3655	0/0:30,0:30:87.28:0,87,3374	0/0:24,0:24:72.25:0,72,2860	0/0:18,0:18:48.16:0,48,1920	0/0:18,0:18:51.18:0,51,2039	0/0:36,0:36:99:0,108,4215	0/0:23,0:23:69.24:0,69,2744	0/0:23,0:23:66.23:0,66,2356	0/0:31,0:31:93.32:0,93,3586	0/0:31,0:31:90.31:0,90,3560	0/0:29,0:29:87.30:0,87,3366	0/0:19,0:19:54.19:0,54,2154	1/1:2,20:22:54.18:1362,54,0	1/1:2,21:23:54.19:1402,54,0	1/1:4,13:17:17.74:467,18,0	0/0:20,0:20:57.20:0,57,2276	0/0:19,0:19:57.20:0,57,2242	0/0:21,0:21:63.22:0,63,2516	0/0:23,0:23:69.24:0,69,2683	0/0:33,0:33:99:0,99,3869	1/1:1,18:19:48.16:1247,48,0	0/0:19,0:19:57.18:0,57,2183
chr10	85028430	.	G	GC	7651.11	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=1.793;DP=593;FS=3.012;HRun=8;HaplotypeScore=80.1105;InbreedingCoeff=0.9850;MQ=77.56;MQ0=0;MQRankSum=-1.410;QD=19.37;ReadPosRankSum=-0.340;VQSLOD=4.5784;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,1:31:65.53:337,66,0	1/1:0,0:7:14.20:72,14,0	0/0:17,1:18:20.19:0,20,257	0/0:15,0:15:17.99:0,18,163	0/0:23,0:23:60.02:0,60,549	0/0:18,0:18:48.02:0,48,439	1/1:3,27:30:81.24:934,81,0	1/1:2,15:17:45.08:494,45,0	1/1:4,13:17:36.11:414,36,0	1/1:3,1:15:31.50:171,32,0	1/1:2,0:16:9.73:146,10,0	1/1:5,20:25:57.17:656,57,0	1/1:4,17:21:48.14:554,48,0	1/1:2,24:26:69.21:796,69,0	1/1:2,1:27:56.82:289,57,0	1/1:2,19:21:57.17:658,57,0	1/1:4,3:36:68.50:376,69,0	0/0:44,0:44:99:0,123,1119	1/1:14,0:14:34.93:204,35,0	1/1:17,0:17:43.58:243,44,0	1/1:20,0:20:43.54:242,44,0	1/1:3,0:11:19.89:101,20,0	0/0:21,0:21:57.01:0,57,516	0/0:28,0:28:75.01:0,75,676	1/1:2,22:24:57.17:658,57,0	0/0:21,0:21:18.66:0,19,358	1/1:20,0:20:55.15:306,55,0	0/0:10,0:10:30.02:0,30,275
chr10	85029120	.	G	GCT	92.58	PASS	AB=1.000;AC=7;AF=0.318;AN=22;BaseQRankSum=-1.109;DP=353;FS=0.000;HRun=0;HaplotypeScore=24.8959;InbreedingCoeff=0.4820;MQ=17.30;MQ0=269;MQRankSum=2.219;QD=2.20;ReadPosRankSum=-0.634;VQSLOD=1.0221;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:8,0:7:6:0,6,60	./.	./.	0/0:17,0:9:3.01:0,3,36	./.	0/0:6,0:1:2.98:0,3,22	./.	./.	0/0:10,0:2:3.01:0,3,34	0/1:13,0:11:0:0,0,0	./.	0/0:5,0:2:3.01:0,3,35	./.	./.	./.	./.	./.	1/1:6,0:2:5.88:35,6,0	1/1:2,12:12:12.04:140,12,0	./.	./.	0/0:12,0:8:9.02:0,9,96	./.	0/0:12,0:8:12.02:0,12,143	./.	1/1:9,0:2:2.60:10,3,0	./.
chr10	85029893	.	AAGAG	A	230.31	PASS	AC=10;AF=0.625;AN=16;BaseQRankSum=-1.892;DP=279;FS=5.219;HRun=0;HaplotypeScore=13.4304;MQ=10.50;MQ0=253;MQRankSum=0.193;QD=3.84;ReadPosRankSum=-1.365;VQSLOD=0.3182;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,3:5:5.97:65,6,0	./.	./.	./.	1/1:6,1:1:3.01:46,3,0	./.	1/1:4,3:3:9.03:139,9,0	./.	./.	./.	./.	./.	./.	./.	0/0:8,0:6:5.75:0,6,82	./.	0/0:13,0:4:8.29:0,8,37	1/1:16,0:1:3:25,3,0	./.	./.	./.	./.	./.	./.	./.	1/1:10,1:2:3.01:46,3,0	0/0:10,0:1:3.01:0,3,44	./.
chr10	85031972	.	CG	C	905.27	PASS	AB=0.866;AC=14;AF=0.250;AN=56;BaseQRankSum=4.960;DP=434;FS=16.508;HRun=11;HaplotypeScore=66.0637;InbreedingCoeff=0.1455;MQ=76.79;MQ0=1;MQRankSum=0.666;QD=4.53;ReadPosRankSum=3.722;VQSLOD=0.3337;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,18:34:54.50:547,55,0	0/0:4,1:5:0:0,0,0	0/0:13,0:12:0.49:0,0,144	0/1:19,1:19:24.35:24,0,66	0/1:9,2:11:31.23:31,0,110	0/1:20,3:23:42.97:43,0,176	1/1:3,1:25:31.51:107,32,0	1/1:9,7:16:14.87:114,15,0	0/0:12,0:12:20.94:0,21,178	0/1:5,1:6:35.90:36,0,52	0/1:4,1:5:9.60:10,0,113	0/1:5,1:20:12.23:12,0,32	0/0:7,0:9:11.27:0,11,69	0/0:17,0:17:17.04:0,17,103	0/0:20,0:20:33.48:0,33,314	0/0:8,0:12:11.70:0,12,93	0/1:27,8:36:99:124,0,415	0/0:22,1:24:16.68:0,17,539	0/0:5,0:5:5.98:0,6,48	0/1:3,1:4:21.98:22,0,38	0/0:14,0:17:4.81:0,5,27	0/0:11,0:12:11.96:0,12,99	0/0:9,0:9:6.02:0,6,64	0/0:27,1:28:13.85:0,14,530	0/0:10,0:15:14.72:0,15,117	0/0:16,0:18:16.18:0,16,223	0/0:4,0:11:6:0,6,56	0/0:7,0:7:9.01:0,9,88
chr10	85033554	.	TATG	T	1129.98	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.764;DP=403;FS=0.000;HRun=0;HaplotypeScore=54.5348;InbreedingCoeff=0.9408;MQ=64.56;MQ0=0;MQRankSum=-0.784;QD=22.60;ReadPosRankSum=0.430;VQSLOD=3.2013;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.27:0,78,1590	0/0:8,0:8:15.05:0,15,311	0/0:4,0:4:12.01:0,12,168	0/0:6,0:5:9.03:0,9,157	0/0:16,0:16:42.12:0,42,796	0/0:15,0:15:30.05:0,30,507	0/0:13,0:13:27.09:0,27,554	0/0:36,0:36:69.18:0,69,1180	0/0:4,0:4:12.04:0,12,238	0/0:17,0:17:42.11:0,42,758	0/0:14,0:14:39.13:0,39,807	0/0:12,0:12:33.11:0,33,671	0/0:5,0:5:12.04:0,12,235	0/0:10,0:10:30.09:0,30,583	0/0:7,0:7:21.04:0,21,348	0/0:19,0:19:54.17:0,54,1082	0/0:28,0:28:66.21:0,66,1313	0/0:28,0:28:69.18:0,69,1349	1/1:4,5:9:15.05:218,15,0	1/1:3,8:11:24.01:320,24,0	1/1:2,10:12:21.07:309,21,0	0/0:5,0:5:15.05:0,15,289	0/0:9,0:9:21.07:0,21,435	0/0:9,0:9:21.05:0,21,361	0/0:16,0:16:42.13:0,42,792	0/0:21,0:21:54.17:0,54,1048	1/1:1,17:18:30.10:441,30,0	0/0:22,0:22:48.16:0,48,940
chr10	85034084	.	G	GA	1814.93	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.794;DP=478;FS=1.847;HRun=5;HaplotypeScore=45.2453;InbreedingCoeff=0.8825;MQ=74.78;MQ0=0;MQRankSum=-0.528;QD=33.00;ReadPosRankSum=-0.446;VQSLOD=3.7481;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:82.54:1246,83,0	0/0:2,0:2:3.01:0,3,32	0/0:11,0:11:27.06:0,27,280	0/0:6,0:6:15:0,15,147	0/0:14,0:14:30.08:0,30,322	0/0:21,0:21:63.16:0,63,677	0/0:32,0:32:90.20:0,90,958	1/1:1,19:20:54.13:690,54,0	0/0:18,0:18:48.12:0,48,516	0/0:17,0:17:48.12:0,48,516	0/0:7,0:7:21.05:0,21,224	0/0:22,0:22:60.15:0,60,645	0/0:11,0:11:33.07:0,33,347	0/0:16,0:16:45.11:0,45,484	0/0:15,0:15:45.11:0,45,483	0/0:15,0:15:45.11:0,45,484	0/0:36,0:36:99:0,99,1064	0/0:31,0:31:90.23:0,90,967	0/0:25,0:25:69.16:0,69,734	0/0:6,0:6:18.05:0,18,193	0/0:30,0:30:84.21:0,84,903	0/0:6,0:6:15.04:0,15,161	0/0:8,0:8:24.06:0,24,258	0/0:24,0:24:72.18:0,72,774	0/0:13,0:13:36.09:0,36,387	0/0:19,0:19:51.12:0,51,541	0/0:13,0:13:33.08:0,33,355	0/0:5,0:5:12.03:0,12,129
chr10	85035498	.	AC	A	805.31	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.534;DP=385;FS=0.660;HRun=8;HaplotypeScore=43.3450;InbreedingCoeff=0.8881;MQ=86.38;MQ0=0;MQRankSum=-3.096;QD=19.17;ReadPosRankSum=-1.246;VQSLOD=2.7782;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,18:24:54.08:521,54,0	0/0:4,0:4:12.01:0,12,131	0/0:21,0:21:14.24:0,14,394	0/0:17,0:15:15.65:0,16,307	0/0:5,0:5:12.04:0,12,145	0/0:17,0:17:50.97:0,51,545	0/0:3,0:23:43.32:0,43,238	1/1:4,14:18:42.06:406,42,0	0/0:10,0:10:30.09:0,30,362	0/0:8,0:8:24.07:0,24,290	0/0:8,0:8:21.06:0,21,253	0/0:18,0:18:51.14:0,51,603	0/0:17,0:17:39.12:0,39,471	0/0:16,0:16:42.07:0,42,461	0/0:14,0:14:33.07:0,33,368	0/0:22,0:22:63.18:0,63,751	0/0:16,0:16:45.13:0,45,534	0/0:24,0:24:72.18:0,72,828	0/0:6,0:6:14.96:0,15,162	0/0:10,0:10:27.08:0,27,326	0/0:19,0:19:45.10:0,45,516	0/0:6,0:6:15.05:0,15,181	0/0:3,0:3:9.03:0,9,109	0/0:22,0:22:60.16:0,60,701	0/0:6,0:6:12.04:0,12,145	0/0:11,0:11:30.09:0,30,362	0/0:14,0:14:42.10:0,42,472	0/0:5,0:5:15.03:0,15,170
chr10	85036390	.	T	TA	501.86	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-5.760;DP=548;FS=1.627;HRun=10;HaplotypeScore=60.5583;InbreedingCoeff=0.5192;MQ=79.52;MQ0=0;MQRankSum=-1.828;QD=12.87;ReadPosRankSum=-1.819;VQSLOD=3.0592;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:72.73:0,73,589	0/0:10,0:10:29.96:0,30,246	0/1:14,0:14:6.05:6,0,135	0/0:13,0:13:16.88:0,17,130	0/0:20,1:21:21.98:0,22,387	0/0:24,0:24:65.85:0,66,535	1/1:4,21:25:16.88:591,17,0	0/0:19,1:21:20.99:0,21,365	0/0:18,0:18:53.91:0,54,438	0/0:19,0:21:43:0,43,329	0/0:10,0:10:5.96:0,6,49	0/0:28,0:30:78.95:0,79,621	0/0:15,0:15:41.93:0,42,342	0/0:16,0:16:35.62:0,36,282	0/0:20,0:22:51.99:0,52,406	0/0:24,0:25:66.95:0,67,520	0/0:27,0:28:70.93:0,71,572	0/0:22,0:23:55.97:0,56,449	0/0:17,1:18:9.82:0,10,277	0/0:6,0:6:11.96:0,12,95	0/0:21,0:21:55.95:0,56,449	0/0:12,0:13:22.96:0,23,178	0/0:10,0:11:17.96:0,18,148	0/0:36,0:38:99:0,101,814	0/0:21,0:22:43.95:0,44,349	0/0:19,2:21:6.91:0,7,263	0/0:23,0:23:56.87:0,57,460	0/0:4,0:4:5.99:0,6,49
chr10	85036851	.	G	GCTCT	2507.62	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.275;DP=410;FS=3.240;HRun=0;HaplotypeScore=69.4924;InbreedingCoeff=0.8763;MQ=87.80;MQ0=1;MQRankSum=-3.133;QD=61.16;ReadPosRankSum=0.146;VQSLOD=5.0562;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,28:33:84.29:2184,84,0	0/0:2,0:2:6.02:0,6,110	0/0:14,0:14:39.13:0,39,702	0/0:16,0:17:39.44:0,39,665	0/0:9,0:9:24.08:0,24,441	0/0:14,0:14:42.14:0,42,767	0/0:15,0:15:42.14:0,42,773	1/1:1,6:7:18.06:443,18,0	0/0:14,0:13:39.13:0,39,718	0/0:11,0:11:33.07:0,33,560	0/0:5,0:5:12.04:0,12,216	0/0:12,0:12:33.11:0,33,607	0/0:13,0:13:33.11:0,33,607	0/0:25,0:25:75.26:0,75,1353	0/0:18,0:18:54.19:0,54,993	0/0:14,0:14:39.13:0,39,718	0/0:25,0:25:69.24:0,69,1269	0/0:31,0:31:87.30:0,87,1590	0/0:16,0:16:39.13:0,39,716	0/0:8,0:8:24.08:0,24,426	0/0:29,0:29:81.28:0,81,1474	0/0:9,0:9:27.09:0,27,465	0/0:3,0:3:9.03:0,9,165	0/0:19,0:19:42.14:0,42,773	0/0:12,0:12:30.10:0,30,545	0/0:19,0:19:51.16:0,51,881	0/0:4,0:4:9.03:0,9,166	0/0:11,0:11:33.11:0,33,607
chr10	85037324	.	TTAA	T	4394.64	PASS	AB=0.940;AC=34;AF=0.630;AN=54;BaseQRankSum=9.704;DP=301;FS=3.184;HRun=0;HaplotypeScore=45.7658;InbreedingCoeff=0.5560;MQ=72.48;MQ0=0;MQRankSum=1.643;QD=20.35;ReadPosRankSum=1.399;VQSLOD=4.3876;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:48.16:697,48,0	1/1:1,7:8:21.07:304,21,0	0/0:4,0:4:2.97:0,3,20	0/1:4,0:4:1.58:2,0,39	0/0:6,0:6:9.03:0,9,185	0/0:17,0:17:42.10:0,42,734	1/1:4,7:11:6.02:87,6,0	1/1:5,19:24:57.03:592,57,0	1/1:0,5:5:15.05:218,15,0	1/1:3,9:12:27.07:366,27,0	1/1:1,5:6:14.87:143,15,0	1/1:3,8:11:15.05:218,15,0	1/1:1,4:5:6.02:87,6,0	1/1:4,3:7:9.03:131,9,0	1/1:2,2:4:3.01:44,3,0	1/1:4,5:9:12.04:175,12,0	1/1:2,28:30:57.19:825,57,0	0/0:33,0:33:87.26:0,87,1654	0/1:19,0:19:99:135,0,131	0/0:3,0:3:5.99:0,6,51	1/1:12,0:12:23.64:151,24,0	./.	0/0:1,0:1:3.01:0,3,62	0/0:11,0:11:21.07:0,21,432	1/1:3,3:6:9.03:131,9,0	0/1:12,1:13:16.59:17,0,390	0/1:4,1:5:15.03:73,0,15	0/0:9,0:9:24.06:0,24,454
chr10	85037341	.	AATT	A	2137.58	PASS	AB=1.000;AC=26;AF=0.481;AN=54;BaseQRankSum=11.676;DP=302;FS=1.020;HRun=0;HaplotypeScore=55.9429;InbreedingCoeff=0.1610;MQ=71.53;MQ0=1;MQRankSum=0.424;QD=10.80;ReadPosRankSum=5.061;VQSLOD=2.3914;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:18.73:247,0,19	0/1:9,0:9:19.32:109,0,19	0/0:5,0:5:6.25:0,6,69	0/1:7,0:6:18.91:19,0,64	0/0:4,0:4:12.03:0,12,209	0/0:17,0:17:42.10:0,42,731	1/1:7,0:7:5.86:34,6,0	0/1:24,0:24:87.50:87,0,107	0/1:7,0:7:31.22:74,0,31	0/1:15,0:15:99:99,0,105	0/1:6,0:6:18.11:26,0,18	1/1:8,0:8:14.57:81,15,0	0/1:5,0:5:16.16:24,0,16	0/1:5,0:5:36.21:36,0,39	0/0:10,0:10:11.25:0,11,199	0/1:6,0:6:13.23:56,0,13	1/1:30,0:30:12.98:294,13,0	0/0:35,0:35:96.22:0,96,1768	1/1:8,15:22:45.08:579,45,0	1/1:3,0:3:3:25,3,0	1/1:0,9:9:24.08:359,24,0	./.	0/0:2,0:2:6.01:0,6,90	0/0:9,0:9:27.07:0,27,493	1/1:3,0:3:8.75:49,9,0	0/0:12,0:12:12.34:0,12,436	1/1:2,4:6:9.03:122,9,0	0/0:10,0:10:27.08:0,27,475
chr10	85037671	.	AC	A	1788.49	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.379;DP=494;FS=14.320;HRun=6;HaplotypeScore=50.1083;InbreedingCoeff=0.9746;MQ=78.03;MQ0=0;MQRankSum=-0.858;QD=21.55;ReadPosRankSum=-0.350;VQSLOD=1.8112;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,35:36:59.34:816,59,0	0/0:5,0:5:12.04:0,12,158	0/0:15,0:14:32.72:0,33,350	0/0:21,0:20:41.33:0,41,487	0/0:11,0:11:33.11:0,33,432	0/0:16,0:16:39.12:0,39,496	1/1:2,25:27:56.94:612,57,0	1/1:2,18:20:48.09:502,48,0	0/0:16,0:16:48.15:0,48,618	0/0:12,0:12:33.10:0,33,419	0/0:7,0:7:21.07:0,21,275	0/0:21,0:21:60.19:0,60,783	0/0:18,0:18:48.15:0,48,614	0/0:26,0:26:69.19:0,69,855	0/0:13,0:13:33.11:0,33,434	0/0:17,0:17:51.17:0,51,671	0/0:32,0:32:93.29:0,93,1207	0/0:26,0:26:69.21:0,69,878	0/0:13,0:13:33.05:0,33,411	0/0:11,0:11:30.10:0,30,393	0/0:42,0:42:99:0,110,1440	0/0:12,0:12:33.09:0,33,418	0/0:8,0:8:24.08:0,24,314	0/0:29,0:29:84.26:0,84,1091	0/0:9,0:9:24.08:0,24,309	0/0:13,0:13:30.09:0,30,379	0/0:14,0:14:39.11:0,39,498	0/0:4,0:4:12.04:0,12,152
chr10	85039300	.	G	GT	4124.55	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-13.486;DP=603;FS=0.376;HRun=8;HaplotypeScore=66.3816;InbreedingCoeff=0.9999;MQ=83.86;MQ0=0;MQRankSum=-3.308;QD=28.06;ReadPosRankSum=-0.606;VQSLOD=3.7175;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:63.19:727,63,0	0/0:12,0:12:33:0,33,298	0/0:30,0:30:54:0,54,494	0/0:18,0:18:41.83:0,42,369	0/0:24,0:24:57.03:0,57,521	0/0:20,0:20:56.99:0,57,511	0/0:23,0:23:57.01:0,57,517	1/1:5,23:28:69.19:786,69,0	0/0:18,0:18:48.50:0,48,440	0/0:22,0:22:57.87:0,58,520	0/0:20,0:20:57.02:0,57,517	0/0:16,0:16:45.02:0,45,412	0/0:23,0:23:63:0,63,568	0/0:22,0:22:56.94:0,57,496	0/0:23,0:23:60.06:0,60,523	0/0:16,0:16:48:0,48,433	0/0:23,0:23:63:0,63,576	0/0:19,0:19:48.02:0,48,439	1/1:6,28:34:84.21:946,84,0	1/1:3,17:20:54.05:592,54,0	1/1:1,13:14:39.12:450,39,0	0/0:19,0:19:54.01:0,54,489	0/0:17,0:17:47.99:0,48,425	0/0:23,0:23:60.01:0,60,544	0/0:20,0:20:54.02:0,54,494	0/0:32,0:32:84.04:0,84,769	1/1:4,23:27:54.16:623,54,0	0/0:16,0:16:42.02:0,42,384
chr10	85039746	.	C	CGA	18910.67	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-18.813;DP=699;FS=1.588;HRun=0;HaplotypeScore=90.7222;InbreedingCoeff=0.9966;MQ=80.61;MQ0=2;MQRankSum=-2.427;QD=54.19;ReadPosRankSum=-0.502;VQSLOD=5.0719;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,56:56:99:3168,157,0	1/1:1,5:7:15.05:305,15,0	0/0:22,0:22:63.21:0,63,1015	0/0:12,0:13:30.99:0,31,469	0/0:30,0:30:90.31:0,90,1461	0/0:20,0:20:60.19:0,60,952	1/1:1,30:31:87.30:1767,87,0	1/1:2,23:28:72.23:1364,72,0	1/1:1,15:16:42.14:843,42,0	1/1:1,30:30:84.29:1678,84,0	1/1:0,16:17:45.15:914,45,0	0/0:36,0:36:99:0,108,1705	0/0:31,0:31:93.30:0,93,1482	0/0:18,0:18:51.17:0,51,832	1/1:0,34:34:96.33:1946,96,0	0/0:30,0:30:84.29:0,84,1365	1/1:0,24:25:66.23:1341,66,0	0/0:21,0:21:54.13:0,54,828	1/1:3,23:28:78.22:1509,78,0	1/1:0,16:17:48.16:974,48,0	1/1:2,33:35:87.30:1767,87,0	0/0:25,0:25:72.25:0,72,1160	0/0:28,0:28:81.28:0,81,1321	0/0:28,0:28:84.27:0,84,1330	0/0:15,0:15:39.13:0,39,636	0/0:27,0:27:78.27:0,78,1267	1/1:0,23:23:66.23:1336,66,0	0/0:6,0:6:18.06:0,18,289
chr10	85039770	.	C	CG	6301.74	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-15.205;DP=698;FS=4.626;HRun=3;HaplotypeScore=104.7046;InbreedingCoeff=0.9919;MQ=85.47;MQ0=2;MQRankSum=-1.821;QD=37.29;ReadPosRankSum=3.293;VQSLOD=4.7437;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:53:99:0,138,1641	0/0:6,0:6:18.05:0,18,215	0/0:27,0:27:65.39:0,65,745	0/0:18,0:18:45.03:0,45,502	0/0:29,0:29:78.19:0,78,908	0/0:22,0:22:50.50:0,51,571	0/0:24,0:24:69.21:0,69,827	0/0:23,0:23:57.16:0,57,665	0/0:24,0:24:63.19:0,63,754	0/0:29,0:28:72.22:0,72,864	0/0:19,0:19:57.16:0,57,671	1/1:0,34:34:96.32:1343,96,0	1/1:2,30:32:84.28:1175,84,0	1/1:0,20:20:57.19:798,57,0	0/0:32,0:32:84.26:0,84,1007	1/1:4,31:35:27.40:1230,27,0	0/0:26,0:26:60.14:0,60,693	0/0:16,0:16:45.14:0,45,540	0/0:28,0:28:75.14:0,75,867	0/0:18,0:18:45.14:0,45,538	0/0:27,0:27:66.18:0,66,780	1/1:0,33:33:87.29:1216,87,0	0/0:24,0:24:66.19:0,66,778	0/0:29,0:29:78.24:0,78,936	1/1:0,15:15:39.13:540,39,0	0/0:28,0:28:84.26:0,84,1003	0/0:22,0:22:63.19:0,63,756	0/0:4,0:4:12.04:0,12,144
chr10	85041084	.	G	GT	1661.56	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.339;DP=396;FS=2.715;HRun=6;HaplotypeScore=45.9722;InbreedingCoeff=0.8872;MQ=96.33;MQ0=0;MQRankSum=-4.148;QD=30.21;ReadPosRankSum=-2.890;VQSLOD=2.9965;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:69.22:868,69,0	0/0:10,0:10:27.06:0,27,275	0/0:21,0:21:14.74:0,15,380	0/0:17,0:18:50.32:0,50,491	0/0:23,0:23:63.14:0,63,643	0/0:14,0:14:36.08:0,36,367	0/0:17,0:17:42.06:0,42,409	1/1:3,26:29:75.20:915,75,0	0/0:13,0:13:33.07:0,33,331	0/0:11,0:11:33.07:0,33,332	0/0:16,0:16:45.09:0,45,453	0/0:12,0:12:33.08:0,33,337	0/0:6,0:6:18.04:0,18,184	0/0:1,0:1:3.01:0,3,31	0/0:13,0:13:27.05:0,27,271	0/0:11,0:11:33.08:0,33,337	0/0:28,0:28:72.16:0,72,734	0/0:16,0:14:45.10:0,45,457	0/0:12,0:12:36.08:0,36,367	0/0:12,0:12:30.07:0,30,306	0/0:17,0:17:48.11:0,48,490	0/0:6,0:6:15.03:0,15,153	0/0:7,0:7:15.03:0,15,153	0/0:9,0:9:24.02:0,24,230	0/0:7,0:7:21.05:0,21,214	0/0:17,0:17:51.11:0,51,520	0/0:15,0:15:42.08:0,42,421	0/0:9,0:9:27.02:0,27,261
chr10	85042904	.	CA	C	2290.04	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.922;DP=680;FS=3.080;HRun=1;HaplotypeScore=73.6307;InbreedingCoeff=1.0000;MQ=80.60;MQ0=0;MQRankSum=-0.224;QD=36.94;ReadPosRankSum=-2.288;VQSLOD=3.2393;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:84.28:1172,84,0	0/0:14,0:14:42.14:0,42,667	0/0:18,0:18:54.18:0,54,830	0/0:20,0:20:58.73:0,59,856	0/0:25,0:25:75.22:0,75,1149	0/0:14,0:14:42.10:0,42,643	0/0:20,0:20:60.20:0,60,941	1/1:0,31:31:90.29:1240,90,0	0/0:23,0:23:66.22:0,66,1050	0/0:31,0:31:90.29:0,90,1376	0/0:17,0:17:51.17:0,51,806	0/0:24,0:24:63.21:0,63,1006	0/0:28,0:28:69.21:0,69,1076	0/0:25,0:25:51.13:0,51,783	0/0:25,0:25:72.25:0,72,1151	0/0:18,0:18:48.16:0,48,767	0/0:30,0:30:90.28:0,90,1404	0/0:34,0:34:99:0,102,1625	0/0:29,0:29:87.30:0,87,1386	0/0:30,0:30:87.03:0,87,1362	0/0:31,0:31:84.27:0,84,1316	0/0:21,0:21:53.91:0,54,817	0/0:21,0:21:63.21:0,63,1007	0/0:25,0:25:75.26:0,75,1199	0/0:27,0:27:69.24:0,69,1103	0/0:24,0:24:72.24:0,72,1131	0/0:21,0:21:57.19:0,57,905	0/0:23,0:23:69.24:0,69,1103
chr10	85043045	.	TC	T	89.05	PASS	AB=0.833;AC=2;AF=0.038;AN=52;BaseQRankSum=5.356;DP=565;FS=3.540;HRun=2;HaplotypeScore=147.4374;InbreedingCoeff=-0.0501;MQ=47.78;MQ0=21;MQRankSum=-5.690;QD=4.95;ReadPosRankSum=1.394;VQSLOD=0.7691;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:7,7:14:99:163,0,180	0/0:6,0:6:17.81:0,18,171	./.	./.	0/0:15,0:14:39.10:0,39,541	0/0:21,0:21:62.93:0,63,813	0/0:16,0:15:45.12:0,45,592	0/0:16,0:7:15.02:0,15,160	0/0:18,0:18:34.47:0,34,360	0/0:13,0:12:27.25:0,27,359	0/1:4,0:4:1.23:1,0,51	0/0:35,0:28:36.94:0,37,468	0/0:29,0:24:50.65:0,51,623	0/0:37,0:32:41.79:0,42,669	0/0:16,0:15:41.06:0,41,431	0/0:41,0:35:69.18:0,69,942	0/0:14,0:14:9.84:0,10,334	0/0:38,0:36:99:0,101,1509	0/0:10,0:2:6.01:0,6,71	0/0:8,0:7:14.83:0,15,137	0/0:24,0:23:56.72:0,57,753	0/0:29,1:26:1.37:0,1,381	0/0:21,0:19:51.11:0,51,740	0/0:50,0:50:99:0,128,2010	0/0:33,0:32:73.01:0,73,908	0/0:23,0:23:68.69:0,69,922	0/0:19,0:19:9.20:0,9,408	0/0:13,0:9:24.05:0,24,311
chr10	85043050	.	TC	T	1778.30	PASS	AB=0.815;AC=14;AF=0.259;AN=54;BaseQRankSum=6.050;DP=602;FS=8.987;HRun=2;HaplotypeScore=145.1072;InbreedingCoeff=-0.3280;MQ=48.31;MQ0=23;MQRankSum=-1.978;QD=6.59;ReadPosRankSum=-2.826;VQSLOD=-0.6904;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,1:15:67.72:68,0,225	0/1:5,0:4:51.65:52,0,77	0/0:2,0:1:0.47:0,0,1	./.	0/0:16,0:15:42.13:0,42,600	0/0:21,0:21:59.93:0,60,789	0/0:16,0:15:38.69:0,39,501	0/0:19,0:12:24.06:0,24,307	0/1:9,9:18:99:230,0,286	0/1:10,5:14:99:139,0,329	0/1:1,3:4:32.81:85,0,33	0/1:29,7:29:99:173,0,459	0/1:32,4:30:99:108,0,668	0/1:31,7:32:99:167,0,604	0/1:15,3:17:99:235,0,309	0/0:47,0:41:74.79:0,75,887	0/1:10,6:16:99:141,0,281	0/0:38,0:36:99:0,108,1526	0/1:12,0:2:20.55:21,0,39	0/1:4,4:7:99:134,0,113	0/0:23,4:26:24.37:0,24,824	0/1:25,5:26:99:173,0,351	0/0:22,0:20:54.10:0,54,747	0/0:53,0:52:99:0,133,2026	0/0:34,0:31:34.34:0,34,663	0/0:25,0:25:74.70:0,75,977	0/1:14,5:19:99:206,0,422	0/0:10,0:7:18.06:0,18,261
chr10	85043465	.	A	ACC	1944.91	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-1.776;DP=514;FS=40.332;HRun=8;HaplotypeScore=82.0137;InbreedingCoeff=0.9469;MQ=74.82;MQ0=2;MQRankSum=-0.009;QD=15.44;ReadPosRankSum=-0.050;VQSLOD=-0.7433;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:42:72.52:0,73,336	1/1:0,6:7:14.54:188,15,0	0/0:31,0:23:23.62:0,24,298	0/0:28,0:21:10.87:0,11,147	0/0:16,0:16:39.08:0,39,429	0/0:24,0:24:60.12:0,60,656	1/1:3,0:24:27.45:94,27,0	0/0:23,0:22:46.49:0,46,208	1/1:4,9:14:18.06:283,18,0	1/1:3,6:10:13.23:140,13,0	1/1:0,0:9:15.03:146,15,0	0/0:25,0:25:49.12:0,49,306	0/0:17,0:17:23.58:0,24,204	0/0:12,0:12:12.76:0,13,87	1/1:1,14:15:12.04:190,12,0	1/1:2,9:11:5.58:94,6,0	1/1:5,17:23:44.81:674,45,0	0/0:20,0:20:47.65:0,48,533	0/0:13,0:13:29.94:0,30,316	0/0:11,0:11:12.62:0,13,221	0/0:30,0:30:68.47:0,68,748	0/0:12,0:12:14.60:0,15,143	0/0:13,0:13:27.02:0,27,291	0/0:17,0:17:42.10:0,42,468	1/1:4,8:12:24.08:343,24,0	0/0:21,0:21:54.14:0,54,599	0/0:24,0:24:51.06:0,51,625	0/0:6,0:6:18.05:0,18,200
chr10	85043472	.	CCAA	C	2298.21	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.062;DP=525;FS=0.000;HRun=0;HaplotypeScore=92.1493;InbreedingCoeff=0.9552;MQ=73.71;MQ0=2;MQRankSum=-0.856;QD=37.07;ReadPosRankSum=-0.250;VQSLOD=4.2835;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:37:81.22:1339,81,0	0/0:9,0:9:20.98:0,21,297	0/0:37,0:25:43.10:0,43,809	0/0:30,0:21:30.33:0,30,343	0/0:16,0:16:48.12:0,48,986	0/0:22,0:22:66.13:0,66,1298	0/0:21,0:21:33.11:0,33,541	1/1:0,25:24:72.19:1081,72,0	0/0:14,0:14:27.09:0,27,441	0/0:12,0:12:32.93:0,33,426	0/0:14,0:14:33.11:0,33,521	0/0:22,0:22:65.96:0,66,896	0/0:16,0:16:37.76:0,38,591	0/0:12,0:12:24.63:0,25,321	0/0:22,0:22:36.12:0,36,598	0/0:9,0:9:8.03:0,8,61	0/0:27,0:27:66.21:0,66,1063	0/0:19,0:19:54.66:0,55,1268	0/0:9,0:9:27.09:0,27,636	0/0:11,0:11:30.10:0,30,616	0/0:30,0:30:90.21:0,90,1684	0/0:15,0:15:39.88:0,40,448	0/0:12,0:12:36.10:0,36,745	0/0:17,0:17:51.13:0,51,1123	0/0:13,0:12:26.87:0,27,212	0/0:23,0:23:66.21:0,66,1349	0/0:25,0:25:75.23:0,75,1540	0/0:6,0:6:18.05:0,18,378
chr10	85043970	.	GT	G	8348.35	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=11.356;DP=573;FS=5.999;HRun=1;HaplotypeScore=63.0771;InbreedingCoeff=0.9954;MQ=90.42;MQ0=0;MQRankSum=-1.813;QD=39.75;ReadPosRankSum=2.623;VQSLOD=5.5783;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1803	1/1:0,4:4:12.04:168,12,0	0/0:20,0:20:57.18:0,57,879	0/0:27,0:27:75.26:0,75,1196	0/0:20,0:20:60.20:0,60,959	0/0:19,0:19:57.19:0,57,911	0/0:27,0:27:81.28:0,81,1292	0/0:27,0:27:81.26:0,81,1245	1/1:0,14:14:39.13:545,39,0	1/1:0,28:28:84.26:1137,84,0	1/1:0,15:15:45.15:629,45,0	1/1:0,21:21:63.21:881,63,0	1/1:0,16:16:45.15:629,45,0	1/1:0,24:24:69.23:964,69,0	1/1:0,13:13:39.13:545,39,0	1/1:0,18:18:51.17:713,51,0	1/1:0,28:28:72.24:1007,72,0	0/0:27,0:27:75.26:0,75,1197	0/0:22,0:22:66.23:0,66,1054	0/0:18,0:18:54.18:0,54,863	0/0:26,0:26:78.25:0,78,1221	1/1:0,18:18:54.18:752,54,0	0/0:17,0:17:51.17:0,51,800	0/0:18,0:18:54.17:0,54,836	1/1:0,11:11:27.09:378,27,0	0/0:26,1:27:36.29:0,36,1156	0/0:20,0:20:60.20:0,60,959	0/0:10,0:10:27.09:0,27,432
chr10	85045499	.	TC	T	2294.76	PASS	AB=0.873;AC=27;AF=0.482;AN=56;BaseQRankSum=0.837;DP=422;FS=14.478;HRun=11;HaplotypeScore=63.5616;InbreedingCoeff=0.5826;MQ=80.80;MQ0=0;MQRankSum=-1.362;QD=9.68;ReadPosRankSum=3.657;VQSLOD=1.0362;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:21:33.75:104,34,0	0/0:4,0:8:2.63:0,3,14	0/1:14,0:13:4.94:5,0,87	0/0:20,0:19:12.27:0,12,167	0/1:13,2:17:25.59:26,0,164	0/0:23,0:23:19.49:0,19,364	1/1:5,13:18:35.95:295,36,0	1/1:6,0:16:20.35:59,20,0	0/0:5,0:12:8.81:0,9,54	0/0:7,0:11:11.83:0,12,86	0/0:8,0:8:8.44:0,8,65	1/1:3,11:14:26.96:222,27,0	1/1:2,11:13:26.97:221,27,0	1/1:3,12:15:29.96:246,30,0	0/0:6,0:18:14.44:0,14,91	0/0:19,0:19:44.99:0,45,452	0/0:10,0:14:32.50:0,32,205	0/0:16,1:16:5.35:0,5,248	1/1:3,9:13:29:227,29,0	1/1:7,13:20:41.87:337,42,0	1/1:1,6:7:14.98:123,15,0	1/1:3,6:10:20:154,20,0	0/1:9,2:11:22.22:22,0,189	0/0:13,1:14:11.49:0,11,312	0/0:21,0:21:48.10:0,48,497	0/1:8,2:10:25.22:25,0,152	1/1:4,17:23:51.96:405,52,0	0/1:12,3:15:31.60:32,0,76
chr10	85045568	.	TG	T	654.47	PASS	AB=0.867;AC=13;AF=0.232;AN=56;BaseQRankSum=1.313;DP=389;FS=3.052;HRun=11;HaplotypeScore=61.1539;InbreedingCoeff=-0.0055;MQ=75.75;MQ0=0;MQRankSum=-0.065;QD=3.60;ReadPosRankSum=3.861;VQSLOD=-0.5002;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,14:28:54.97:426,55,0	0/0:4,0:4:3.01:0,3,32	0/0:15,0:12:2.85:0,3,76	0/0:12,0:10:17.54:0,18,131	0/1:14,1:15:27.94:28,0,131	0/1:17,4:21:46.94:47,0,143	0/1:21,2:25:29.91:30,0,193	1/1:8,8:16:20.92:167,21,0	0/0:6,0:6:6.49:0,6,64	0/0:9,1:12:11.92:0,12,95	0/0:6,0:10:11.65:0,12,85	0/1:9,2:11:34.27:34,0,68	0/0:7,0:7:6:0,6,51	0/0:11,0:15:29.17:0,29,204	0/0:13,0:14:17.68:0,18,218	0/1:11,3:14:28.26:28,0,129	0/0:29,0:34:46.91:0,47,329	0/1:18,4:21:13.24:13,0,264	0/0:12,0:13:3.61:0,4,101	0/0:13,0:14:5.77:0,6,39	0/0:13,0:13:3.89:0,4,34	0/0:9,0:10:12:0,12,113	0/1:8,1:9:9.61:10,0,106	0/0:11,1:12:15.03:0,15,160	0/1:8,2:10:15.60:16,0,48	0/1:10,1:11:12.62:13,0,83	0/0:9,0:10:8.84:0,9,71	0/0:6,0:6:11.99:0,12,112
chr10	85046603	.	G	GA	5603.95	PASS	AB=0.923;AC=37;AF=0.661;AN=56;BaseQRankSum=1.841;DP=369;FS=7.122;HRun=1;HaplotypeScore=58.4975;InbreedingCoeff=0.9130;MQ=77.61;MQ0=1;MQRankSum=-4.738;QD=22.87;ReadPosRankSum=2.080;VQSLOD=4.5890;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,32:36:61.63:854,62,0	1/1:2,1:3:8.94:81,9,0	0/0:20,0:16:21.91:0,22,322	0/0:19,0:19:34.98:0,35,344	0/0:13,0:13:39.08:0,39,457	0/0:13,0:13:39:0,39,465	0/0:14,0:14:42.10:0,42,502	1/1:1,21:22:57.16:739,57,0	1/1:5,0:10:11.09:178,11,0	1/1:4,2:8:17.59:166,18,0	1/1:3,0:6:14.94:117,15,0	1/1:0,19:19:36.12:497,36,0	1/1:5,6:11:27.55:355,28,0	1/1:0,13:13:36.12:500,36,0	1/1:5,1:18:52.05:415,52,0	1/1:5,0:14:38.70:283,39,0	1/1:4,0:9:23.70:171,24,0	0/0:7,0:7:21.05:0,21,257	1/1:1,2:13:17.27:273,17,0	1/1:0,0:9:26.69:189,27,0	1/1:3,1:15:23.89:181,24,0	1/1:1,9:10:21.07:287,21,0	0/0:10,0:10:30.01:0,30,295	0/0:13,0:13:39.13:0,39,503	1/1:2,1:6:13.78:113,14,0	0/1:11,1:12:5.37:5,0,349	1/1:0,0:10:26.86:200,27,0	0/0:14,0:14:41.99:0,42,477
chr10	85046620	.	C	CGA	3646.03	PASS	AB=0.929;AC=17;AF=0.304;AN=56;BaseQRankSum=1.509;DP=351;FS=14.075;HRun=0;HaplotypeScore=64.2558;InbreedingCoeff=0.9001;MQ=78.97;MQ0=0;MQRankSum=-6.435;QD=37.20;ReadPosRankSum=0.476;VQSLOD=4.8678;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:66.22:0,66,917	1/1:0,3:3:9.03:162,9,0	0/0:11,0:11:30.10:0,30,420	0/0:13,0:13:36.12:0,36,497	0/0:10,0:10:27.09:0,27,378	0/0:11,0:11:33.11:0,33,462	0/0:12,0:12:33.11:0,33,462	0/0:19,0:19:45.15:0,45,629	1/1:2,9:11:27.09:483,27,0	1/1:1,12:14:33.11:577,33,0	1/1:1,9:11:18.06:310,18,0	0/0:16,0:16:30.10:0,30,420	0/0:8,0:8:18.06:0,18,252	0/0:11,0:11:30.10:0,30,420	1/1:2,18:20:54.19:969,54,0	1/1:3,9:12:27.09:485,27,0	1/1:0,8:8:21.07:377,21,0	0/0:11,0:11:27.09:0,27,378	0/0:12,0:12:30.10:0,30,420	0/0:9,0:9:21.05:0,21,276	0/0:18,0:18:42.12:0,42,564	0/0:10,0:10:27.09:0,27,374	0/0:10,0:10:27.09:0,27,375	0/0:17,0:17:48.12:0,48,649	1/1:0,5:6:15.05:269,15,0	0/1:12,1:13:14.87:15,0,443	0/0:13,0:13:27.03:0,27,332	0/0:12,0:12:36.12:0,36,504
chr10	85046891	.	CAAA	C	2464.82	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=4.273;DP=455;FS=1.689;HRun=16;HaplotypeScore=82.0542;InbreedingCoeff=0.8469;MQ=79.68;MQ0=8;MQRankSum=-4.428;QD=10.53;ReadPosRankSum=5.161;VQSLOD=0.4244;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,12:23:34.13:368,34,0	1/1:4,2:7:1.34:30,1,0	0/0:54,0:21:35.10:0,35,332	0/1:50,0:26:1.25:1,0,160	0/0:7,0:8:13.27:0,13,175	0/0:8,0:9:21:0,21,241	0/0:14,0:20:49.15:0,49,481	1/1:11,7:23:22.54:253,23,0	1/1:8,6:14:17.82:193,18,0	1/1:5,3:9:7.96:108,8,0	1/1:0,3:3:9.02:97,9,0	1/1:3,10:15:32.80:313,33,0	1/1:2,4:7:14.90:147,15,0	1/1:7,9:16:20.66:214,21,0	1/1:1,5:6:8.99:97,9,0	1/1:3,3:7:14.94:137,15,0	1/1:8,19:29:50.96:531,51,0	0/0:15,0:19:42.12:0,42,668	0/0:6,0:17:41.90:0,42,355	0/0:3,0:6:8.93:0,9,65	0/0:6,0:13:17.93:0,18,137	1/1:12,2:14:5.76:64,6,0	0/0:10,0:12:27.07:0,27,399	0/0:16,0:19:45.11:0,45,669	1/1:4,6:10:10.41:127,10,0	0/0:22,0:25:51.12:0,51,749	0/0:3,0:11:17.96:0,18,198	0/0:7,0:7:6.02:0,6,107
chr10	85047316	.	AGGAC	A	15666.52	PASS	AC=34;AF=0.630;AN=54;BaseQRankSum=14.585;DP=487;FS=5.640;HRun=0;HaplotypeScore=117.1381;InbreedingCoeff=0.9945;MQ=82.40;MQ0=0;MQRankSum=-9.942;QD=48.20;ReadPosRankSum=2.686;VQSLOD=5.8209;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:84.29:1613,84,0	1/1:0,6:6:18.06:352,18,0	0/0:19,0:19:51.18:0,51,1318	0/0:15,0:15:39.13:0,39,1012	0/0:9,0:9:24.08:0,24,677	0/0:13,0:13:39.13:0,39,1068	0/0:17,0:17:51.18:0,51,1460	1/1:5,20:25:58.27:1036,58,0	1/1:0,16:16:45.15:825,45,0	1/1:0,12:12:36.11:651,36,0	./.	1/1:0,21:21:54.18:973,54,0	1/1:2,17:19:52.73:998,53,0	1/1:0,23:23:66.23:1235,66,0	1/1:4,21:25:61.57:1157,62,0	1/1:1,16:17:45.15:871,45,0	1/1:0,40:40:99:1954,102,0	0/0:20,0:20:60.18:0,60,1629	1/1:1,11:12:26.19:413,26,0	1/1:1,4:5:13.86:235,14,0	1/1:0,32:32:73.13:1351,73,0	1/1:0,8:8:24.08:460,24,0	0/0:9,0:9:27.09:0,27,694	0/0:30,0:30:90.31:0,90,2586	1/1:0,11:11:29.66:565,30,0	0/0:19,0:19:57.20:0,57,1593	1/1:2,19:21:51.17:979,51,0	0/0:11,0:11:30.10:0,30,869
chr10	85047612	.	T	TG	2733.16	PASS	AB=0.788;AC=19;AF=0.339;AN=56;BaseQRankSum=10.931;DP=639;FS=8.304;HRun=0;HaplotypeScore=125.4204;InbreedingCoeff=-0.0560;MQ=60.53;MQ0=7;MQRankSum=-5.838;QD=7.79;ReadPosRankSum=8.256;VQSLOD=2.5673;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:66.75:0,67,449	1/1:0,9:9:23.25:136,23,0	0/0:44,0:12:22.28:0,22,168	0/0:29,0:16:13.78:0,14,172	0/0:19,0:19:53.44:0,53,523	0/0:17,0:16:42.39:0,42,381	0/0:15,0:15:44.42:0,44,295	0/0:21,0:21:53.21:0,53,410	0/1:19,4:23:99:161,0,100	0/1:25,9:34:99:343,0,159	0/1:14,4:18:46.73:152,0,47	0/1:18,3:21:99:124,0,103	0/1:13,10:23:27.07:194,0,27	0/1:21,4:25:90.13:188,0,90	0/1:15,7:22:61.58:187,0,62	0/1:19,7:26:99:206,0,116	0/1:14,5:20:8.19:181,0,8	0/0:26,0:26:75.04:0,75,727	0/1:8,2:25:19.58:257,0,20	1/1:5,2:18:13.68:130,14,0	1/1:16,0:15:4.37:124,4,0	0/1:20,5:25:49.84:242,0,50	0/0:18,0:18:37.68:0,38,312	0/0:11,0:11:26.05:0,26,232	0/1:27,4:31:99:258,0,184	0/0:28,0:28:77.30:0,77,696	0/1:9,2:15:23.06:23,0,61	0/0:14,0:14:38.35:0,38,335
chr10	85047613	.	T	TTTTTG	4199.88	PASS	AB=0.994;AC=23;AF=0.411;AN=56;BaseQRankSum=13.066;DP=623;FS=19.116;HRun=0;HaplotypeScore=177.1298;InbreedingCoeff=-0.1572;MQ=59.67;MQ0=7;MQRankSum=-3.970;QD=10.05;ReadPosRankSum=4.166;VQSLOD=1.3317;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:46,0:46:99:152,0,257	1/1:9,0:9:4.97:129,5,0	0/0:43,0:11:9:0,9,92	0/0:29,0:16:7.56:0,8,225	0/0:20,0:20:50.12:0,50,597	0/0:17,0:16:43.42:0,43,487	0/1:14,0:14:14.33:328,0,14	0/1:20,0:20:99:101,0,223	0/1:23,0:23:40.94:176,0,41	0/1:33,0:33:99:337,0,154	0/1:16,0:16:14.66:181,0,15	0/1:21,0:21:26.43:161,0,26	0/1:23,0:23:33.62:380,0,34	0/1:25,0:25:41.98:309,0,42	0/1:22,0:22:54.28:256,0,54	0/1:25,0:25:51.24:283,0,51	1/1:20,0:20:8.13:322,8,0	0/0:25,0:25:69:0,69,868	0/1:19,2:21:45.39:237,0,45	1/1:14,2:16:10.44:241,10,0	0/1:15,0:14:20.69:43,0,21	0/1:23,0:23:56.07:188,0,56	0/0:19,0:19:37.79:0,38,322	0/0:11,0:11:27:0,27,276	0/1:31,0:31:99:137,0,120	0/0:27,0:27:63.32:0,63,701	1/1:13,0:15:17.91:239,18,0	0/0:14,0:14:38.32:0,38,367
chr10	85047615	.	T	TTTGTTTTTTTG	24280.90	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=6.570;DP=626;FS=16.529;HRun=0;HaplotypeScore=232.5766;InbreedingCoeff=0.4570;MQ=60.41;MQ0=7;MQRankSum=-11.168;QD=57.67;ReadPosRankSum=9.769;VQSLOD=2.5009;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:46,0:46:71.91:72,0,457	1/1:7,2:9:5.05:432,5,0	0/0:44,0:12:4.48:0,4,118	0/0:30,0:16:20.18:0,20,426	0/0:19,0:19:54.14:0,54,1069	0/0:17,0:16:44.79:0,45,865	0/1:14,0:14:57.61:754,0,58	0/1:21,0:21:43.57:44,0,260	1/1:19,4:23:56.02:1992,56,0	1/1:25,8:33:52.99:2611,53,0	1/1:12,4:16:43.36:1402,43,0	1/1:16,3:19:21.25:1336,21,0	1/1:14,10:24:66.14:2501,66,0	1/1:23,3:26:30.17:1941,30,0	1/1:16,7:23:66.09:2523,66,0	1/1:18,7:25:51.25:2107,51,0	1/1:17,4:22:55.46:1503,55,0	0/0:25,0:25:69.10:0,69,1533	0/1:20,0:20:77.41:200,0,77	0/1:16,0:16:53.03:92,0,53	0/1:15,0:14:27.27:27,0,92	1/1:17,5:22:53.90:1791,54,0	0/0:19,0:19:42.66:0,43,488	0/0:11,0:11:26.67:0,27,466	1/1:28,4:32:80.28:2744,80,0	0/0:26,0:26:77.49:0,77,1119	0/1:15,0:15:22.06:211,0,22	0/0:14,0:14:39.01:0,39,563
chr10	85048924	.	TA	T	1966.47	PASS	AB=0.902;AC=27;AF=0.482;AN=56;BaseQRankSum=3.819;DP=451;FS=2.017;HRun=13;HaplotypeScore=54.4826;InbreedingCoeff=0.7478;MQ=74.48;MQ0=4;MQRankSum=-0.184;QD=10.63;ReadPosRankSum=2.497;VQSLOD=3.1401;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:28:68.95:0,69,656	1/1:1,4:5:8.94:66,9,0	0/0:35,0:15:6.76:0,7,34	0/0:15,1:10:19.47:0,19,109	0/0:18,0:18:36.05:0,36,348	0/0:12,0:12:24.04:0,24,234	0/0:27,0:28:66.73:0,67,601	0/0:8,0:17:28.85:0,29,167	1/1:1,8:9:20.88:153,21,0	1/1:5,12:17:35.70:257,36,0	1/1:3,11:15:31.84:223,32,0	1/1:5,9:15:25.88:181,26,0	1/1:2,7:9:11.91:88,12,0	1/1:1,3:5:7.99:50,8,0	1/1:1,6:7:14.91:109,15,0	1/1:3,10:13:26.75:197,27,0	1/1:1,26:27:65.62:482,66,0	0/0:20,0:20:53.80:0,54,492	0/1:14,3:19:42.73:43,0,246	0/1:10,0:10:13.39:13,0,23	0/0:11,0:11:27.01:0,27,250	1/1:2,6:8:14.90:109,15,0	0/0:17,0:17:33:0,33,311	0/0:18,2:20:26.17:0,26,416	1/1:1,9:10:26.84:197,27,0	0/1:13,3:16:17.66:18,0,142	0/0:23,0:23:60.09:0,60,579	0/0:17,0:17:23.94:0,24,207
chr10	85049688	.	AG	A	1685.84	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-3.410;DP=576;FS=1.034;HRun=8;HaplotypeScore=103.6037;InbreedingCoeff=0.9925;MQ=81.34;MQ0=0;MQRankSum=1.020;QD=24.43;ReadPosRankSum=0.886;VQSLOD=3.5815;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:35:77.76:0,78,413	0/0:1,0:9:14:0,14,73	0/0:21,0:21:42.02:0,42,452	0/0:18,0:17:38.78:0,39,380	0/0:26,0:26:63.19:0,63,760	0/0:23,0:23:60.18:0,60,724	0/0:9,0:25:40.15:0,40,212	0/0:4,0:23:55.08:0,55,319	0/0:7,0:20:34.43:0,34,175	0/0:4,0:14:25.93:0,26,134	0/0:7,0:21:31.56:0,32,161	0/0:0,0:25:68.97:0,69,351	0/0:3,0:16:34.34:0,34,172	0/0:2,0:18:37.46:0,37,199	0/0:5,0:20:37.38:0,37,190	0/0:2,0:22:43.13:0,43,219	0/0:3,0:32:74.62:0,75,378	0/0:24,0:24:66.16:0,66,781	1/1:0,8:8:24.03:227,24,0	1/1:0,20:20:60.09:576,60,0	1/1:1,20:21:57.09:550,57,0	0/0:1,0:17:45.99:0,46,248	0/0:20,0:20:51.15:0,51,605	0/0:26,0:27:78.11:0,78,920	0/0:5,0:18:31.68:0,32,171	0/0:25,0:25:69.21:0,69,831	1/1:1,19:20:51.08:492,51,0	0/0:8,0:8:24.06:0,24,277
chr10	85053271	.	G	GAAGA	3632.73	PASS	AB=0.553;AC=13;AF=0.232;AN=56;BaseQRankSum=1.551;DP=495;FS=16.611;HRun=0;HaplotypeScore=92.8506;InbreedingCoeff=0.8667;MQ=61.68;MQ0=4;MQRankSum=-0.647;QD=25.95;ReadPosRankSum=-2.334;VQSLOD=1.9276;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:60.84:1136,61,0	0/0:4,0:4:12.04:0,12,174	0/0:17,0:12:21.02:0,21,297	0/0:11,0:9:9.03:0,9,129	0/0:14,0:14:41.34:0,41,609	0/0:17,0:17:42.14:0,42,675	0/0:26,0:26:60.16:0,60,823	0/0:30,0:30:57.19:0,57,918	0/0:16,0:16:36.12:0,36,533	0/0:16,0:16:27.09:0,27,436	0/0:15,0:15:42.10:0,42,580	0/0:18,0:18:39.12:0,39,617	0/0:17,0:17:45.14:0,45,710	0/0:16,0:16:36.12:0,36,567	0/0:23,0:23:51.16:0,51,765	1/1:22,0:22:55.63:666,56,0	0/0:21,0:21:39.13:0,39,592	0/0:18,0:18:45.13:0,45,641	1/1:21,0:21:41.54:557,42,0	1/1:6,0:6:11.11:123,11,0	1/1:10,0:11:25.57:343,26,0	0/0:8,0:8:15.05:0,15,243	0/0:6,0:6:12.03:0,12,169	0/0:22,0:22:50.45:0,50,796	0/1:5,20:26:31.58:212,0,32	0/0:22,0:22:48.13:0,48,680	1/1:21,0:21:50.33:596,50,0	0/0:18,0:18:54.18:0,54,824
chr10	85053284	.	AAG	A	828.83	PASS	AB=0.934;AC=9;AF=0.161;AN=56;BaseQRankSum=9.803;DP=465;FS=10.670;HRun=0;HaplotypeScore=76.3648;InbreedingCoeff=0.5501;MQ=56.31;MQ0=6;MQRankSum=1.925;QD=7.60;ReadPosRankSum=0.461;VQSLOD=1.9709;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,1:28:30.21:164,0,30	0/0:4,0:4:9.92:0,10,138	0/0:13,0:8:21.02:0,21,289	0/0:5,1:4:9.03:0,9,120	0/0:15,0:15:44.35:0,44,648	0/0:15,0:15:45.15:0,45,710	0/0:21,1:22:19.99:0,20,805	0/0:30,0:29:70.47:0,70,1043	0/0:15,0:15:23.19:0,23,403	0/0:12,0:12:30.10:0,30,447	0/0:15,0:15:14.47:0,14,477	0/0:16,0:16:45.15:0,45,758	0/0:18,0:18:51.16:0,51,838	0/0:14,0:14:36.12:0,36,563	0/0:22,0:22:39.67:0,40,572	1/1:23,0:23:17.55:141,18,0	0/0:25,0:25:35.35:0,35,507	0/0:16,0:16:45.15:0,45,677	0/1:19,2:20:99:124,0,107	1/1:4,2:6:11.24:106,11,0	0/1:11,1:12:60.22:76,0,60	0/0:6,0:6:18.06:0,18,291	0/0:5,0:5:12.03:0,12,161	0/0:21,0:21:12.76:0,13,817	0/0:25,0:25:18.04:0,18,230	0/0:18,0:18:34.44:0,34,448	1/1:12,7:19:24.48:373,24,0	0/0:23,0:23:42.14:0,42,637
chr10	85053286	.	GAGAAAGAA	G	1644.43	PASS	AB=0.867;AC=23;AF=0.442;AN=52;BaseQRankSum=4.312;DP=470;FS=0.696;HRun=0;HaplotypeScore=128.1877;InbreedingCoeff=0.3942;MQ=55.99;MQ0=7;MQRankSum=-4.715;QD=7.21;ReadPosRankSum=-0.791;VQSLOD=2.0804;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:17.95:250,18,0	1/1:3,1:4:3.01:72,3,0	./.	./.	0/0:15,0:15:12.04:0,12,449	0/0:15,0:15:12.04:0,12,417	0/0:22,0:22:0:0,0,0	0/0:32,0:31:3.63:0,4,10	1/1:9,0:14:9.03:168,9,0	1/1:13,0:13:5.95:73,6,0	1/1:11,4:15:9.03:217,9,0	0/0:17,0:17:36.11:0,36,1203	0/0:19,0:19:33.11:0,33,1243	0/0:13,0:13:12.03:0,12,314	1/1:13,8:21:12.04:293,12,0	0/1:25,0:25:17.10:17,0,658	0/1:12,12:25:11.46:191,0,11	0/0:15,0:15:2.97:0,3,20	0/1:20,0:19:42.35:55,0,42	1/1:4,1:5:5.37:34,5,0	1/1:13,0:13:12.04:222,12,0	0/0:6,0:6:6.02:0,6,243	1/1:4,0:5:0.47:1,0,0	0/0:21,0:22:38.30:0,38,1119	0/0:24,0:24:15.05:0,15,556	0/1:10,0:19:48.48:48,0,181	0/1:20,0:20:99:175,0,99	0/0:15,0:23:11.97:0,12,97
chr10	85053292	.	GAA	G	762.37	PASS	AB=0.913;AC=9;AF=0.161;AN=56;BaseQRankSum=12.070;DP=449;FS=2.091;HRun=3;HaplotypeScore=73.8215;InbreedingCoeff=0.0239;MQ=54.40;MQ0=17;MQRankSum=1.898;QD=5.19;ReadPosRankSum=2.111;VQSLOD=-0.1811;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:32:56.96:98,0,57	0/0:4,0:4:4.83:0,5,122	0/0:6,0:2:6.02:0,6,86	0/0:5,0:3:6.02:0,6,86	0/0:14,0:14:42.14:0,42,657	0/0:13,0:13:39.12:0,39,586	0/0:22,0:22:55.94:0,56,828	0/0:40,0:30:75.25:0,75,880	0/0:14,0:14:10.98:0,11,304	0/0:10,0:10:0.77:0,1,280	0/1:12,0:12:8.74:9,0,350	0/0:19,0:19:57.19:0,57,1010	0/0:17,0:17:51.17:0,51,878	0/0:13,0:13:39.11:0,39,569	0/0:18,0:18:7.97:0,8,397	0/1:21,1:22:68.95:69,0,350	0/1:24,1:25:5.89:6,0,371	0/0:15,0:15:45.15:0,45,634	0/1:16,2:15:93.88:94,0,100	1/1:3,2:5:11.01:97,11,0	0/1:12,2:14:33.48:138,0,33	0/0:6,0:6:18.06:0,18,287	0/0:4,0:4:11.25:0,11,135	0/0:21,0:21:60.32:0,60,936	0/0:21,0:21:15.05:0,15,290	0/0:17,0:17:17.91:0,18,357	0/1:12,7:19:10.01:389,0,10	0/0:23,0:23:35.75:0,36,499
chr10	85053312	.	GAA	G	203.04	PASS	AB=0.727;AC=4;AF=0.074;AN=54;BaseQRankSum=9.112;DP=421;FS=3.896;HRun=3;HaplotypeScore=72.6587;InbreedingCoeff=0.1835;MQ=52.27;MQ0=21;MQRankSum=-5.945;QD=5.49;ReadPosRankSum=6.570;VQSLOD=-0.2569;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:66.16:0,66,877	0/0:7,0:7:15.73:0,16,199	1/1:3,0:1:2.68:11,3,0	./.	0/0:8,0:8:24.08:0,24,402	0/0:12,0:12:36.12:0,36,560	0/1:11,8:16:99:140,0,189	0/0:40,0:27:72.24:0,72,1022	0/0:13,0:13:7.08:0,7,318	0/0:9,0:9:27.09:0,27,372	0/0:9,0:9:8.95:0,9,243	0/0:21,0:21:63.20:0,63,1078	0/0:19,0:19:57.18:0,57,962	0/0:7,0:7:21.07:0,21,345	0/0:13,0:13:1.03:0,1,160	0/0:18,0:18:42.56:0,43,703	0/0:28,0:28:22.62:0,23,574	0/1:10,5:15:99:149,0,185	0/0:19,0:12:30.67:0,31,414	0/0:4,0:4:1.25:0,1,40	0/0:16,0:16:43.70:0,44,545	0/0:6,0:6:18.06:0,18,287	0/0:5,0:5:14.26:0,14,179	0/0:18,0:18:52.42:0,52,860	0/0:22,0:22:24.08:0,24,419	0/0:17,0:17:23.15:0,23,381	0/0:18,0:18:27.56:0,28,373	0/0:21,0:21:23.76:0,24,364
chr10	85053559	.	T	TTTA	1775.40	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=5.666;DP=348;FS=7.213;HRun=0;HaplotypeScore=52.4671;InbreedingCoeff=0.7115;MQ=75.30;MQ0=0;MQRankSum=0.504;QD=21.65;ReadPosRankSum=-1.010;VQSLOD=1.9081;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:30.07:0,30,384	1/1:1,3:4:4.61:120,5,0	0/0:8,0:7:6.02:0,6,85	0/0:11,0:11:3.01:0,3,38	0/0:11,0:11:21.04:0,21,262	0/0:33,0:33:75.23:0,75,1055	0/0:4,0:4:3.01:0,3,43	0/0:38,0:37:63.19:0,63,867	1/1:4,4:8:9.03:184,9,0	1/1:5,6:11:18.06:356,18,0	1/1:7,5:12:11.95:174,12,0	0/0:1,0:6:8.93:0,9,63	0/0:3,0:15:17.86:0,18,126	0/1:9,0:10:10.42:10,0,15	1/1:5,7:12:12.04:245,12,0	0/0:10,0:10:18.06:0,18,258	1/1:4,21:25:42.14:857,42,0	0/0:19,0:19:39.05:0,39,511	0/0:16,0:16:21.03:0,21,247	0/0:5,0:5:12.03:0,12,154	0/0:17,0:17:27.09:0,27,389	./.	0/0:2,0:2:3.01:0,3,43	0/0:5,0:5:12:0,12,149	0/0:9,0:9:21.07:0,21,301	0/0:11,0:11:24.07:0,24,329	0/0:6,0:6:9.03:0,9,121	0/0:23,0:23:69.20:0,69,963
chr10	85053602	.	G	GT	1247.36	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.919;DP=367;FS=0.000;HRun=1;HaplotypeScore=49.3422;InbreedingCoeff=0.8708;MQ=76.01;MQ0=0;MQRankSum=0.314;QD=30.42;ReadPosRankSum=1.264;VQSLOD=3.2366;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:36.12:540,36,0	0/0:6,0:6:18.06:0,18,233	0/0:13,0:13:0.64:0,1,350	0/0:14,0:13:14.54:0,15,345	0/0:10,0:10:23.75:0,24,311	0/0:24,0:24:69.22:0,69,895	1/1:0,10:10:24.04:335,24,0	0/0:39,0:39:99:0,108,1401	0/0:8,0:8:24.08:0,24,311	0/0:11,0:11:33.09:0,33,414	0/0:9,0:9:21.06:0,21,259	0/0:8,0:8:24.06:0,24,295	0/0:11,0:11:33.11:0,33,427	0/0:6,0:6:18.06:0,18,234	0/0:21,0:21:63.19:0,63,803	0/0:12,0:12:36.12:0,36,467	0/0:26,0:26:78.25:0,78,1007	1/1:0,14:14:36.08:515,36,0	0/0:17,0:17:48.16:0,48,622	0/0:3,0:3:9.03:0,9,117	0/0:17,0:17:51.17:0,51,661	0/0:9,0:9:21.07:0,21,272	0/0:9,0:9:15.05:0,15,195	0/0:5,0:5:15.05:0,15,195	0/0:7,0:7:15.05:0,15,194	0/0:11,0:11:33.11:0,33,428	0/0:8,0:8:24.08:0,24,310	0/0:22,0:22:60.17:0,60,762
chr10	85053804	.	ACC	A	4160.99	PASS	AB=0.837;AC=40;AF=0.714;AN=56;BaseQRankSum=1.243;DP=421;FS=31.150;HRun=12;HaplotypeScore=61.2307;InbreedingCoeff=0.6908;MQ=81.42;MQ0=1;MQRankSum=0.162;QD=11.85;ReadPosRankSum=7.530;VQSLOD=-0.4251;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,1:23:11.54:12,0,47	1/1:1,0:2:2.74:12,3,0	0/0:12,0:13:0.19:0,0,128	0/1:19,0:19:2.16:2,0,91	0/0:7,0:7:9:0,9,92	0/0:11,0:11:6.48:0,6,70	1/1:6,0:30:52.10:226,52,0	1/1:10,0:23:33.77:145,34,0	1/1:3,11:15:32.79:316,33,0	1/1:7,6:16:26.47:237,26,0	1/1:2,3:5:11.76:103,12,0	1/1:4,9:14:20.71:187,21,0	1/1:2,8:10:15:153,15,0	1/1:3,13:15:20.99:213,21,0	1/1:4,21:25:54.08:549,54,0	1/1:3,11:16:35.53:329,36,0	1/1:15,16:33:53.47:511,53,0	1/1:3,0:12:24.69:107,25,0	1/1:9,3:15:14.45:115,14,0	1/1:3,3:6:6.01:61,6,0	1/1:6,20:26:36.06:366,36,0	1/1:5,7:12:8.98:92,9,0	0/0:6,0:6:5.99:0,6,50	0/0:14,0:14:18.03:0,18,211	1/1:3,9:12:15.01:152,15,0	0/0:11,0:11:9:0,9,96	1/1:8,11:19:27.01:275,27,0	0/0:6,0:8:11.99:0,12,133
chr10	85053929	.	C	CCT	359.66	PASS	AB=0.755;AC=3;AF=0.054;AN=56;BaseQRankSum=0.067;DP=389;FS=5.937;HRun=0;HaplotypeScore=63.3043;InbreedingCoeff=-0.0042;MQ=41.39;MQ0=57;MQRankSum=-0.846;QD=14.99;ReadPosRankSum=-2.615;VQSLOD=2.0403;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:16:32.97:0,33,402	0/1:3,1:3:39.75:84,0,40	0/0:16,0:3:8.94:0,9,89	0/0:33,0:3:0.89:0,1,2	0/0:14,0:13:27.09:0,27,440	0/0:11,0:9:9.03:0,9,135	0/0:20,0:13:30.05:0,30,430	0/0:17,0:9:24.08:0,24,389	0/0:9,0:9:8.74:0,9,144	0/1:9,3:11:99:185,0,238	0/0:4,1:5:12.03:0,12,159	0/0:16,0:15:27.09:0,27,438	0/0:7,0:6:9.03:0,9,146	0/0:9,0:9:24.08:0,24,388	0/1:4,3:7:33.69:189,0,34	0/0:18,0:18:51.12:0,51,734	0/0:19,0:14:23.86:0,24,216	0/0:10,0:11:5.32:0,5,237	0/0:10,0:8:21.07:0,21,342	0/0:5,0:4:3.01:0,3,49	0/0:16,0:15:39.66:0,40,534	0/0:17,0:13:19.51:0,20,284	0/0:12,0:9:9.01:0,9,111	0/0:25,0:23:41.17:0,41,627	0/0:14,0:10:25.89:0,26,372	0/0:18,0:13:39.12:0,39,589	0/0:15,0:13:36.11:0,36,549	0/0:9,0:4:3.01:0,3,37
chr10	85053962	.	T	TTC	719.71	PASS	AB=0.975;AC=31;AF=0.674;AN=46;BaseQRankSum=2.222;DP=561;FS=14.651;HRun=0;HaplotypeScore=87.0940;InbreedingCoeff=0.1828;MQ=37.14;MQ0=81;MQRankSum=-0.937;QD=2.44;ReadPosRankSum=-3.399;VQSLOD=-0.3073;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:11:2.68:11,3,0	1/1:4,0:3:2.66:24,3,0	./.	./.	0/1:14,0:14:0:0,0,0	0/1:15,5:19:0.97:39,0,1	1/1:19,0:14:2.96:19,3,0	./.	0/1:14,0:14:0:0,0,0	0/1:11,0:10:5.69:6,0,24	0/1:8,0:8:0.03:0,0,0	./.	1/1:10,0:9:6.87:51,7,0	1/1:11,0:11:5.99:49,6,0	1/1:3,2:6:3.01:44,3,0	0/0:14,0:14:2.84:0,3,14	1/1:21,0:19:17.87:160,18,0	1/1:17,0:16:15.49:106,15,0	0/1:21,0:19:21.48:35,0,21	0/1:16,0:15:0:0,0,0	0/0:13,0:12:2.87:0,3,15	1/1:22,0:20:14.93:122,15,0	0/1:14,0:15:16.14:16,0,31	0/0:24,0:25:6.43:0,6,182	1/1:13,0:10:1.25:3,1,0	0/1:21,0:19:15.02:58,0,15	1/1:17,0:13:13.32:97,13,0	./.
chr10	85054178	.	GGTGT	G	712.41	PASS	AB=0.894;AC=30;AF=0.682;AN=44;BaseQRankSum=5.011;DP=499;FS=7.686;HRun=0;HaplotypeScore=85.8962;InbreedingCoeff=0.3232;MQ=73.31;MQ0=19;MQRankSum=-1.069;QD=2.76;ReadPosRankSum=2.403;VQSLOD=0.9477;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:21:6.01:56,6,0	./.	./.	./.	0/0:17,0:16:2.79:0,3,61	0/0:33,0:32:16.12:0,16,620	1/1:23,1:23:3.01:46,3,0	0/0:20,0:18:0.47:0,0,1	./.	1/1:26,0:25:3.01:38,3,0	1/1:7,0:7:6.47:53,6,0	1/1:12,0:15:3:28,3,0	1/1:7,0:11:5.87:56,6,0	1/1:10,0:14:9.01:84,9,0	1/1:18,0:17:6:55,6,0	1/1:13,0:17:3.47:29,3,0	1/1:20,10:31:14.48:210,14,0	0/1:16,2:17:33.91:34,0,55	./.	1/1:13,0:14:1.25:3,1,0	./.	1/1:9,0:11:3:28,3,0	0/1:7,1:8:18.93:40,0,19	0/0:32,0:31:29.96:0,30,410	1/1:10,0:14:5.96:56,6,0	0/0:22,0:20:1.25:0,1,3	1/1:8,0:8:3.01:32,3,0	0/0:9,0:7:3.01:0,3,56
chr10	85054890	.	TTTTTTTTTTTTTTTTGGTTGTTGTTGTTCCATTTC	T	3823.27	PASS	AB=0.809;AC=8;AF=0.143;AN=56;BaseQRankSum=7.183;DP=553;FS=0.000;HRun=0;HaplotypeScore=396.7902;InbreedingCoeff=0.7527;MQ=61.80;MQ0=8;MQRankSum=-2.678;QD=43.95;ReadPosRankSum=5.226;VQSLOD=0.9687;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:74.05:0,74,5230	0/0:6,0:6:15.05:0,15,1398	0/0:43,0:18:17.06:0,17,877	0/1:23,0:7:2.92:3,0,336	0/0:25,0:25:64.45:0,64,4450	0/0:18,0:18:45.15:0,45,4033	0/0:17,0:17:51.18:0,51,3088	0/0:24,0:23:54.17:0,54,2252	0/0:14,0:14:36.12:0,36,2338	0/0:23,0:23:57.75:0,58,4366	0/0:13,0:12:33.11:0,33,2890	0/1:8,13:21:0.23:1504,0,0	1/1:7,6:13:8.31:1262,8,0	1/1:5,10:14:8.51:762,9,0	0/0:12,0:12:36.12:0,36,2284	0/0:12,0:12:27.09:0,27,1792	0/0:26,0:26:69.71:0,70,5250	0/0:25,0:25:72.25:0,72,5430	0/0:26,0:25:72.23:0,72,4272	0/0:16,0:16:45.15:0,45,3318	0/0:8,0:8:15.05:0,15,987	1/1:5,10:15:7.39:292,7,0	0/0:17,0:17:51.17:0,51,3928	0/0:16,0:16:43.03:0,43,4054	0/0:25,0:25:72.25:0,72,4854	0/0:26,0:25:75.26:0,75,5420	0/0:27,0:27:57.20:0,57,3412	0/0:20,0:19:51.18:0,51,4149
chr10	85055097	.	TA	T	1632.04	PASS	AB=0.801;AC=28;AF=0.500;AN=56;BaseQRankSum=4.196;DP=494;FS=10.030;HRun=15;HaplotypeScore=54.7330;InbreedingCoeff=0.5997;MQ=73.28;MQ0=2;MQRankSum=3.440;QD=6.02;ReadPosRankSum=2.553;VQSLOD=1.6136;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:35:37.99:0,38,223	1/1:1,4:6:10.89:64,11,0	0/0:22,0:13:16.70:0,17,108	0/0:23,0:16:1.50:0,2,73	0/1:12,1:13:1.29:1,0,108	0/0:18,2:20:6.40:0,6,290	0/1:11,4:15:47.14:47,0,116	1/1:12,0:21:14.06:47,14,0	1/1:6,6:14:15.62:88,16,0	1/1:3,15:18:12.56:181,13,0	1/1:8,8:17:3.92:81,4,0	0/0:12,0:13:29.73:0,30,245	0/0:12,0:13:22.12:0,22,169	0/0:12,0:12:15:0,15,132	1/1:3,16:21:39.51:242,40,0	1/1:5,25:30:50.18:327,50,0	1/1:5,17:22:29.54:192,30,0	0/0:15,0:16:32.50:0,33,241	1/1:8,14:23:19.96:246,20,0	1/1:5,5:10:5.55:31,6,0	1/1:5,4:9:5.77:37,6,0	0/1:13,3:17:11.72:12,0,137	0/0:11,1:12:7.77:0,8,184	0/0:19,2:21:11.94:0,12,318	1/1:4,3:8:10.87:63,11,0	0/0:18,3:22:5.54:0,6,318	0/1:11,14:25:37.90:172,0,38	0/0:10,0:12:17.82:0,18,142
chr10	85055680	.	C	CTTT	3550.89	PASS	AB=0.852;AC=38;AF=0.679;AN=56;BaseQRankSum=4.053;DP=459;FS=2.603;HRun=14;HaplotypeScore=89.7125;InbreedingCoeff=0.5707;MQ=89.21;MQ0=3;MQRankSum=-2.473;QD=9.97;ReadPosRankSum=-2.603;VQSLOD=0.3659;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,3:38:51.02:409,51,0	1/1:0,0:5:6.45:46,6,0	0/1:32,0:21:17.92:18,0,68	0/1:28,0:22:45.47:45,0,46	0/0:22,0:22:36.85:0,37,396	0/0:11,0:11:20.80:0,21,215	1/1:8,5:16:27.02:380,27,0	0/0:22,0:22:2.14:0,2,132	1/1:5,0:13:17.93:136,18,0	1/1:11,0:21:25.92:184,26,0	1/1:1,0:11:31.18:279,31,0	1/1:2,0:9:7.97:33,8,0	0/1:1,0:9:8.97:19,0,9	1/1:2,0:3:1.25:3,1,0	1/1:2,1:9:14.49:138,14,0	1/1:2,1:12:13.24:139,13,0	1/1:8,0:33:43.84:304,44,0	1/1:8,9:22:25.28:351,25,0	1/1:8,0:19:29.17:218,29,0	1/1:2,2:16:42.64:376,43,0	1/1:5,0:10:12.84:93,13,0	0/1:6,0:7:18.31:18,0,24	0/0:7,0:9:14.79:0,15,140	0/0:7,0:8:17.84:0,18,163	1/1:5,0:16:19.20:152,19,0	0/0:14,0:18:5.48:0,5,239	1/1:11,4:25:24.45:208,24,0	0/0:12,0:13:25.51:0,26,261
chr10	85055694	.	T	TA	361.87	PASS	AB=0.972;AC=5;AF=0.089;AN=56;BaseQRankSum=0.729;DP=426;FS=0.000;HRun=3;HaplotypeScore=64.6517;InbreedingCoeff=0.3063;MQ=81.05;MQ0=4;MQRankSum=1.470;QD=4.36;ReadPosRankSum=-0.610;VQSLOD=-0.1199;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:43.16:0,43,217	0/0:3,0:3:8.76:0,9,55	0/1:26,0:14:0.74:1,0,54	0/1:26,0:16:13.31:36,0,13	0/0:22,0:22:53.89:0,54,555	0/0:13,0:13:30.02:0,30,307	0/1:10,0:11:0.05:0,0,65	1/1:5,14:20:42.02:430,42,0	0/0:10,0:10:18.44:0,18,110	0/0:22,0:22:55.93:0,56,409	0/0:16,0:16:28.41:0,28,192	0/0:9,0:9:3.31:0,3,26	0/0:9,0:9:5.97:0,6,42	0/0:4,1:5:4.06:0,4,69	0/0:9,0:9:7.39:0,7,71	0/0:13,0:13:10:0,10,69	0/0:32,0:32:49.86:0,50,301	0/0:15,0:15:25.22:0,25,119	0/0:19,0:19:28.66:0,29,212	0/0:18,0:18:21.16:0,21,134	0/0:6,0:6:13.72:0,14,73	0/0:6,0:6:5.98:0,6,60	0/0:12,0:12:29.94:0,30,274	0/0:6,0:6:14.98:0,15,160	0/0:17,0:17:34.09:0,34,239	0/0:17,0:18:42.78:0,43,427	0/0:19,0:19:18.25:0,18,182	0/0:14,0:14:37.36:0,37,378
chr10	85056103	.	GA	G	1911.30	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=10.621;DP=506;FS=1.477;HRun=10;HaplotypeScore=52.4085;InbreedingCoeff=0.8479;MQ=79.57;MQ0=0;MQRankSum=0.121;QD=15.67;ReadPosRankSum=1.888;VQSLOD=3.9113;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1195	0/0:4,0:4:6.02:0,6,66	0/1:12,0:12:3.37:3,0,164	0/0:14,0:13:11.75:0,12,100	0/0:11,0:11:27.07:0,27,298	0/0:19,2:21:5.02:0,5,495	1/1:3,20:23:50.98:443,51,0	0/0:20,0:20:42.10:0,42,451	0/0:18,2:20:22.07:0,22,472	0/0:17,0:17:30.03:0,30,318	0/0:12,1:13:7.02:0,7,299	1/1:1,16:17:41.98:365,42,0	1/1:4,16:20:29.45:399,29,0	1/1:2,16:19:47.03:397,47,0	0/0:14,0:14:33.09:0,33,365	0/0:26,0:26:72.16:0,72,773	0/0:38,0:38:99:0,99,1075	1/1:4,17:21:8.86:305,9,0	0/0:16,0:16:42.11:0,42,457	0/0:11,0:11:30.07:0,30,325	0/0:29,0:29:74.96:0,75,790	1/1:1,9:10:20.97:182,21,0	0/0:9,0:9:21.05:0,21,225	0/0:34,0:34:90.24:0,90,996	0/0:7,0:7:18.03:0,18,179	0/0:16,0:16:45.12:0,45,498	0/0:19,0:19:48.12:0,48,523	0/0:7,0:7:15.01:0,15,147
chr10	85056349	.	CG	C	1478.35	PASS	AB=0.952;AC=9;AF=0.161;AN=56;BaseQRankSum=7.375;DP=361;FS=0.628;HRun=1;HaplotypeScore=39.7337;InbreedingCoeff=0.8594;MQ=87.34;MQ0=0;MQRankSum=-1.788;QD=22.74;ReadPosRankSum=1.366;VQSLOD=3.6195;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.20:0,84,1238	0/0:7,0:7:21.07:0,21,334	0/1:19,1:19:8.13:8,0,524	0/0:22,0:21:43.89:0,44,610	0/0:16,0:16:42.14:0,42,664	0/0:13,0:13:39.12:0,39,598	0/0:9,0:9:27.09:0,27,430	0/0:15,0:15:42.10:0,42,626	0/0:11,0:11:33.07:0,33,491	0/0:19,0:19:54.14:0,54,813	0/0:9,0:9:24.08:0,24,381	1/1:0,8:8:18.06:252,18,0	1/1:0,15:15:42.14:584,42,0	1/1:0,15:15:42.14:586,42,0	0/0:16,0:16:48.12:0,48,735	0/0:6,0:6:18.02:0,18,259	0/0:17,0:17:51.12:0,51,744	0/0:11,0:11:33.09:0,33,501	0/0:5,0:5:15:0,15,200	0/0:9,0:9:27.07:0,27,404	0/0:18,0:18:54.18:0,54,860	1/1:0,7:7:15.05:210,15,0	0/0:4,0:4:12.03:0,12,168	0/0:7,0:7:18.06:0,18,287	0/0:7,0:7:21.05:0,21,311	0/0:18,0:18:54.17:0,54,836	0/0:18,0:18:54.17:0,54,824	0/0:10,0:10:30.10:0,30,477
chr10	85056932	.	GTCTCTC	G	761.05	PASS	AB=0.914;AC=13;AF=0.250;AN=52;BaseQRankSum=6.234;DP=613;FS=0.000;HRun=0;HaplotypeScore=138.6480;InbreedingCoeff=0.4512;MQ=44.80;MQ0=20;MQRankSum=-4.031;QD=3.88;ReadPosRankSum=0.992;VQSLOD=2.5541;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:40:57.39:0,57,880	1/1:7,0:7:5.90:40,6,0	./.	./.	0/0:17,0:16:27.03:0,27,465	0/0:27,0:26:60.07:0,60,972	0/0:27,0:25:30.94:0,31,513	0/1:30,0:20:17.56:18,0,79	0/0:27,0:27:8.79:0,9,75	0/1:27,0:22:99:169,0,212	0/0:9,0:7:3:0,3,25	1/1:3,17:20:9.01:166,9,0	1/1:6,15:21:15.52:322,16,0	1/1:3,18:19:3.01:67,3,0	0/1:34,0:33:73.20:73,0,82	0/0:19,0:19:47.96:0,48,746	0/1:14,0:13:7.80:58,0,8	0/0:18,0:17:38.66:0,39,498	0/0:29,0:25:59.51:0,60,660	0/0:14,0:14:20.82:0,21,445	0/0:34,0:28:42.35:0,42,542	0/1:9,10:18:0.11:0,0,0	0/0:23,0:19:33.40:0,33,552	0/0:41,0:41:99:0,108,1892	0/0:15,0:14:29.97:0,30,564	0/0:24,0:23:19.68:0,20,656	0/0:32,0:32:69.44:0,69,660	0/0:14,0:14:33.02:0,33,578
chr10	85056970	.	GTC	G	182.15	PASS	AB=1.000;AC=3;AF=0.060;AN=50;BaseQRankSum=3.881;DP=674;FS=4.121;HRun=0;HaplotypeScore=93.8773;InbreedingCoeff=0.3475;MQ=39.53;MQ0=46;MQRankSum=-4.627;QD=4.05;ReadPosRankSum=0.080;VQSLOD=2.2985;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:37:27.53:0,28,421	0/0:10,0:10:8.48:0,8,77	./.	./.	0/0:20,0:16:18.06:0,18,298	0/0:27,0:24:45.15:0,45,798	0/0:9,18:23:2.95:0,3,53	0/1:31,0:21:40.43:40,0,596	0/0:31,0:30:9.03:0,9,160	0/0:30,0:19:43.37:0,43,792	0/0:21,0:20:3.01:0,3,53	0/0:22,0:22:6.02:0,6,86	0/0:18,0:16:21.05:0,21,248	0/0:26,0:21:3.01:0,3,34	0/0:33,0:34:21.07:0,21,373	0/0:28,0:26:48.16:0,48,847	0/0:11,0:11:2.51:0,3,53	1/1:7,7:11:20.96:244,21,0	0/0:26,0:23:54.10:0,54,789	0/0:23,0:22:21.07:0,21,353	0/0:36,1:30:57.18:0,57,977	./.	0/0:20,0:17:27.09:0,27,472	0/0:48,0:46:90.31:0,90,1543	0/0:18,0:18:30.10:0,30,516	0/0:35,0:31:78.26:0,78,1336	0/0:38,0:37:83.21:0,83,1362	0/0:15,0:14:33.11:0,33,585
chr10	85056976	.	CTG	C	139.19	PASS	AB=0.938;AC=4;AF=0.077;AN=52;BaseQRankSum=4.301;DP=687;FS=10.553;HRun=0;HaplotypeScore=91.9617;InbreedingCoeff=0.2698;MQ=38.51;MQ0=49;MQRankSum=-5.017;QD=2.40;ReadPosRankSum=0.022;VQSLOD=1.1358;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:35:21.54:0,22,405	0/0:12,0:10:10.60:0,11,70	./.	./.	0/0:21,0:17:18.01:0,18,236	0/0:31,0:27:45.05:0,45,843	0/0:27,0:22:6.42:0,6,71	0/1:24,4:21:99:118,0,600	0/0:32,0:30:14.91:0,15,200	0/0:32,1:20:24.26:0,24,786	0/0:25,0:21:3.01:0,3,58	0/0:24,0:24:5.85:0,6,72	0/0:18,0:16:19.95:0,20,135	0/0:27,0:22:2.84:0,3,18	0/0:35,0:34:21.07:0,21,405	0/0:28,0:26:50.99:0,51,908	0/0:16,0:15:1.58:0,2,96	1/1:14,0:10:0.82:109,1,0	0/0:26,0:23:50.72:0,51,755	0/0:26,0:25:24.84:0,25,342	0/0:35,0:28:54.17:0,54,996	0/1:16,0:12:0:0,0,0	0/0:21,0:18:26.75:0,27,473	0/0:49,0:46:90.15:0,90,1498	0/0:17,0:17:30.05:0,30,538	0/0:36,0:32:84.18:0,84,1504	0/0:37,0:36:74.29:0,74,1420	0/0:15,0:14:33.11:0,33,612
chr10	85056992	.	CTCTCTG	C	545.56	PASS	AB=0.942;AC=7;AF=0.152;AN=46;BaseQRankSum=4.283;DP=686;FS=6.897;HRun=0;HaplotypeScore=99.2538;InbreedingCoeff=0.2664;MQ=36.21;MQ0=52;MQRankSum=-6.381;QD=4.96;ReadPosRankSum=-3.090;VQSLOD=0.5537;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:43:12.51:0,13,287	1/1:13,0:11:3.08:86,3,0	./.	./.	0/0:18,0:14:2.99:0,3,24	0/0:25,0:21:15.05:0,15,343	0/0:25,0:20:0.47:0,0,2	0/1:27,3:20:99:401,0,108	0/0:31,0:28:0.37:0,0,1	0/1:29,2:19:10.54:148,0,11	0/0:26,1:23:0.26:0,0,1	0/0:25,0:22:2.96:0,3,19	0/1:17,0:13:13.16:13,0,21	./.	./.	0/0:30,0:28:33:0,33,891	1/1:18,0:17:0.94:2,1,0	0/0:15,0:10:18.06:0,18,387	0/0:22,0:21:33.11:0,33,746	0/0:23,0:22:9.03:0,9,224	0/0:32,0:25:30.10:0,30,818	./.	0/0:19,0:18:15.05:0,15,388	0/0:45,0:41:51.13:0,51,1266	0/0:18,0:18:12.02:0,12,312	0/0:43,0:38:54.49:0,54,1886	0/0:38,0:37:72.23:0,72,1693	0/0:14,0:13:18.03:0,18,378
chr10	85057002	.	CTG	C	238.79	PASS	AB=0.935;AC=8;AF=0.167;AN=48;BaseQRankSum=3.171;DP=670;FS=1.967;HRun=0;HaplotypeScore=83.5963;InbreedingCoeff=0.4102;MQ=34.49;MQ0=52;MQRankSum=-1.221;QD=1.78;ReadPosRankSum=-3.466;VQSLOD=0.8161;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,2:43:15.52:0,16,271	1/1:14,0:12:3.80:74,4,0	./.	./.	0/0:17,0:14:3.01:0,3,58	0/0:21,0:17:18.93:0,19,315	0/0:23,0:20:2.69:0,3,8	0/0:42,0:25:47.41:0,47,589	0/1:30,2:29:25.91:26,0,216	0/1:24,2:16:99:150,0,176	1/1:26,3:25:2.96:39,3,0	0/0:24,0:21:2.90:0,3,16	0/0:16,0:12:5.30:0,5,31	./.	1/1:33,0:32:8.99:75,9,0	0/0:31,0:29:18.03:0,18,659	0/0:16,1:17:5.61:0,6,116	0/0:16,0:10:21:0,21,360	0/0:23,0:22:54.09:0,54,864	0/0:21,0:20:12.53:0,13,194	0/0:33,0:26:33.11:0,33,615	./.	0/0:14,0:13:15.05:0,15,289	0/0:44,0:39:53.62:0,54,996	0/0:19,0:19:21.01:0,21,323	0/0:40,0:36:68.46:0,68,1621	0/0:37,0:35:67.44:0,67,1308	0/0:12,0:11:21.07:0,21,390
chr10	85057016	.	CTG	C	336	PASS	AB=0.929;AC=7;AF=0.159;AN=44;BaseQRankSum=7.000;DP=656;FS=13.537;HRun=0;HaplotypeScore=97.8433;InbreedingCoeff=0.2217;MQ=31.88;MQ0=57;MQRankSum=-4.827;QD=2.32;ReadPosRankSum=-3.057;VQSLOD=0.4520;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:42:9.46:0,9,104	0/1:12,1:11:2.72:3,0,12	./.	./.	./.	0/0:18,0:16:8.87:0,9,106	0/0:20,0:17:0.47:0,0,1	0/1:39,4:24:99:156,0,532	0/1:32,1:30:1.45:54,0,1	0/1:19,3:16:93.93:182,0,94	0/0:25,0:22:0.27:0,0,0	0/0:27,0:24:2.88:0,3,15	0/1:18,1:15:10.30:10,0,22	./.	./.	0/0:30,0:29:35.99:0,36,597	1/1:15,0:15:8.23:46,8,0	0/0:15,0:8:11.92:0,12,136	0/0:20,0:18:46.23:0,46,749	0/0:26,0:25:6.91:0,7,116	0/0:36,0:26:23.97:0,24,387	./.	0/0:17,0:16:12:0,12,193	0/0:42,0:35:39.03:0,39,548	0/0:18,0:18:9.03:0,9,173	0/0:38,0:33:71.37:0,71,1345	0/0:37,0:35:56.65:0,57,911	0/0:8,0:7:9.01:0,9,138
chr10	85057052	.	CTGTG	C	1157.51	PASS	AB=0.928;AC=23;AF=0.426;AN=54;BaseQRankSum=0.784;DP=627;FS=0.798;HRun=0;HaplotypeScore=123.4107;InbreedingCoeff=0.5092;MQ=34.85;MQ0=53;MQRankSum=-0.071;QD=3.78;ReadPosRankSum=1.696;VQSLOD=1.7126;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:37:10.93:0,11,113	1/1:10,0:10:9.38:84,9,0	./.	0/0:2,0:1:1.82:0,2,5	0/0:20,0:18:24.08:0,24,380	0/0:25,0:20:18.06:0,18,291	1/1:20,0:22:2.98:45,3,0	0/0:26,0:16:6.02:0,6,78	1/1:26,0:25:12:146,12,0	0/1:21,0:21:12.41:202,0,12	1/1:22,0:21:8.92:136,9,0	0/0:32,0:31:24.01:0,24,363	0/0:18,0:14:12.04:0,12,171	0/0:28,0:21:18.06:0,18,307	1/1:28,2:30:5.51:55,6,0	1/1:16,10:26:12.51:171,13,0	0/1:15,0:16:10.73:11,0,108	0/0:10,0:7:1.25:0,1,3	1/1:17,2:10:11.99:174,12,0	1/1:13,10:23:6.02:82,6,0	1/1:18,14:21:3.01:48,3,0	0/0:25,0:20:0.72:0,1,452	0/1:20,1:20:35.42:35,0,151	0/0:40,0:36:29.10:0,29,555	0/0:9,9:19:0:0,0,0	0/0:21,0:20:29.56:0,30,426	1/1:11,10:22:10.83:145,11,0	0/0:4,0:2:3.01:0,3,45
chr10	85057296	.	CTCTCTCTCTCTCTCTCTCTCT	C	730.62	PASS	AB=0.965;AC=19;AF=0.339;AN=56;BaseQRankSum=3.827;DP=336;FS=19.278;HRun=0;HaplotypeScore=97.5786;InbreedingCoeff=-0.0272;MQ=40.55;MQ0=81;MQRankSum=0.977;QD=4.71;ReadPosRankSum=-2.738;VQSLOD=-0.7467;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:7:11.98:0,12,221	0/1:5,0:4:13.05:92,0,13	0/0:12,0:4:5.96:0,6,48	0/1:15,0:6:35:35,0,69	0/0:15,0:10:12.01:0,12,135	0/0:21,0:17:28.53:0,29,782	0/1:20,0:11:45.48:82,0,45	0/1:10,0:6:20.62:25,0,21	0/1:11,0:9:42.05:77,0,42	0/1:13,0:10:26.71:27,0,129	1/1:7,0:6:4.42:82,4,0	1/1:5,0:3:0.47:1,0,0	0/1:6,0:4:0.03:26,0,0	1/1:3,0:3:1.73:22,2,0	0/1:15,0:13:74.90:96,0,75	0/0:15,0:8:6.02:0,6,279	0/1:14,0:11:23.63:131,0,24	0/1:11,9:11:21.31:175,0,21	0/1:3,0:1:0:0,0,0	0/0:11,0:5:4.26:0,4,43	0/0:13,0:7:3.01:0,3,62	1/1:6,0:3:0.48:1,0,0	0/0:10,0:10:15.02:0,15,143	0/0:16,0:12:17.27:0,17,676	0/0:11,0:2:0.47:0,0,1	0/0:12,0:8:20.09:0,20,591	0/0:15,0:12:0.40:0,0,144	0/0:14,0:11:27.05:0,27,706
chr10	85057298	.	CTCTCTCTCTCTCTCTCTCT	C	954.83	PASS	AB=0.950;AC=19;AF=0.339;AN=56;BaseQRankSum=2.462;DP=330;FS=17.365;HRun=0;HaplotypeScore=85.9155;InbreedingCoeff=0.1323;MQ=40.17;MQ0=84;MQRankSum=0.190;QD=6.20;ReadPosRankSum=-2.774;VQSLOD=-0.2175;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:6:6.01:0,6,126	0/1:6,0:5:12.76:153,0,13	0/0:13,0:5:8.96:0,9,75	0/1:15,0:6:14.09:14,0,69	0/0:15,0:10:12.47:0,12,111	0/0:21,0:17:28.11:0,28,603	0/1:20,0:11:24.74:82,0,25	1/1:11,0:5:3:33,3,0	0/1:10,0:9:39.93:112,0,40	0/1:5,4:6:12.01:82,0,12	1/1:6,0:5:4.42:158,4,0	1/1:5,0:3:0.47:1,0,0	0/0:6,0:4:1.82:0,2,5	0/0:3,0:3:0.22:0,0,1	0/1:12,0:11:19.25:154,0,19	0/0:15,0:8:6.02:0,6,228	1/1:14,0:11:9:158,9,0	0/1:21,0:11:4.71:143,0,5	0/1:3,0:1:0:0,0,0	0/0:10,0:4:3.87:0,4,24	0/0:13,0:7:3.01:0,3,41	1/1:6,0:3:0.48:1,0,0	0/0:9,0:9:15.02:0,15,143	0/0:16,0:12:17.27:0,17,598	0/0:12,0:2:0.47:0,0,1	0/0:12,0:8:20.09:0,20,488	0/1:14,0:11:2.90:3,0,66	0/0:14,0:11:28.22:0,28,628
chr10	85057875	.	T	TG	6806.39	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-12.392;DP=447;FS=14.177;HRun=5;HaplotypeScore=42.1763;InbreedingCoeff=0.9879;MQ=88.97;MQ0=0;MQRankSum=-2.767;QD=32.88;ReadPosRankSum=0.291;VQSLOD=3.7003;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.19:0,84,894	1/1:0,4:4:9.03:117,9,0	0/0:21,0:21:40.08:0,40,442	0/0:14,0:14:36.09:0,36,382	0/0:22,0:22:57.11:0,57,596	0/0:15,0:15:45.10:0,45,476	1/1:3,22:25:60.20:789,60,0	1/1:4,16:20:48.14:615,48,0	1/1:2,16:18:42.14:553,42,0	1/1:0,12:12:36.12:474,36,0	1/1:2,7:9:21.07:275,21,0	1/1:0,15:15:42.14:552,42,0	1/1:2,7:9:21.07:275,21,0	1/1:1,18:19:45.15:592,45,0	1/1:1,21:22:63.20:829,63,0	0/0:17,0:17:51.13:0,51,548	1/1:3,26:29:69.22:908,69,0	1/1:0,10:10:30.10:394,30,0	0/0:15,0:15:39.10:0,39,419	0/0:19,0:19:51.13:0,51,547	0/0:18,0:18:51.13:0,51,548	1/1:2,13:15:33.11:434,33,0	0/0:11,0:11:30.07:0,30,322	0/0:19,0:19:48.12:0,48,516	0/0:10,0:10:24.06:0,24,258	0/0:8,0:8:24.06:0,24,258	0/0:15,0:15:42.11:0,42,451	0/0:5,0:5:15.04:0,15,161
chr10	85058260	.	T	TCC	933.28	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.944;DP=457;FS=0.000;HRun=8;HaplotypeScore=59.5574;InbreedingCoeff=0.9263;MQ=79.88;MQ0=0;MQRankSum=-2.832;QD=16.97;ReadPosRankSum=-0.118;VQSLOD=0.9788;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,1:20:8.10:130,8,0	0/0:7,0:7:17.72:0,18,178	0/0:15,0:16:29.91:0,30,309	0/0:15,0:14:25.11:0,25,270	0/0:13,0:14:36.09:0,36,400	0/0:21,0:21:54.11:0,54,592	1/1:3,16:22:38.62:580,39,0	0/0:21,0:21:33.02:0,33,346	0/0:14,0:14:39.10:0,39,434	0/0:19,0:19:45.11:0,45,501	0/0:11,0:11:24.06:0,24,265	0/0:22,0:22:42.06:0,42,459	0/0:16,0:16:42.08:0,42,458	0/0:17,0:17:51.14:0,51,568	0/0:21,0:21:63.17:0,63,702	0/0:16,0:16:44.85:0,45,484	0/0:33,0:33:87.21:0,87,969	1/1:0,10:13:28.56:359,29,0	0/0:18,0:18:51.14:0,51,568	0/0:7,0:7:18.03:0,18,191	0/0:37,0:37:93.21:0,93,1027	0/0:11,0:11:30.08:0,30,334	0/0:3,0:3:6.02:0,6,67	0/0:22,0:22:63.16:0,63,702	0/0:6,0:6:18.05:0,18,200	0/0:12,0:12:36.10:0,36,401	0/0:10,0:9:21.04:0,21,234	0/0:13,0:13:30.07:0,30,334
chr10	85058555	.	C	CGCT	7531.47	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-12.084;DP=630;FS=3.348;HRun=0;HaplotypeScore=87.6074;InbreedingCoeff=0.8855;MQ=80.08;MQ0=0;MQRankSum=-1.543;QD=49.55;ReadPosRankSum=1.595;VQSLOD=7.2095;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,129,2138	1/1:0,7:7:15.05:339,15,0	0/0:17,0:17:51.15:0,51,815	0/0:15,0:15:9.18:0,9,612	0/0:24,0:24:63.20:0,63,1011	0/0:26,0:26:66.23:0,66,1094	0/0:31,0:31:90.29:0,90,1466	0/0:30,0:30:72.25:0,72,1190	1/1:2,24:26:72.25:1630,72,0	1/1:0,17:17:48.16:1074,48,0	1/1:0,21:21:42.14:950,42,0	0/0:25,0:25:66.23:0,66,1095	0/0:20,0:20:57.19:0,57,949	0/0:41,0:41:99:0,120,1992	1/1:2,31:33:81.28:1830,81,0	0/0:22,0:22:57.19:0,57,949	1/1:2,29:33:75.26:1689,75,0	0/0:22,0:22:66.23:0,66,1099	0/0:12,0:12:33.11:0,33,550	0/0:7,0:7:18.06:0,18,300	0/0:35,0:35:99:0,102,1693	0/0:10,0:10:30.10:0,30,488	0/0:10,0:10:27.08:0,27,426	0/0:38,0:38:99:0,111,1807	0/0:16,0:16:48.16:0,48,793	0/1:15,0:15:19.49:19,0,592	0/0:21,0:21:57.19:0,57,944	0/0:10,0:10:27.09:0,27,450
chr10	85058792	.	T	TTC	1583.66	PASS	AB=0.949;AC=33;AF=0.717;AN=46;BaseQRankSum=1.412;DP=482;FS=1.183;HRun=0;HaplotypeScore=84.3935;InbreedingCoeff=0.3455;MQ=60.88;MQ0=6;MQRankSum=-0.729;QD=4.69;ReadPosRankSum=-1.924;VQSLOD=2.5227;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:9.31:67,9,0	./.	./.	0/0:24,0:12:0:0,0,0	0/1:13,0:14:0.01:0,0,0	1/1:16,0:15:6.02:76,6,0	1/1:23,0:23:20.43:152,20,0	1/1:34,0:34:14.78:122,15,0	0/0:19,0:19:2.84:0,3,14	1/1:16,0:16:4.37:45,4,0	./.	1/1:14,4:18:12.04:177,12,0	1/1:10,0:10:3.01:39,3,0	1/1:18,0:18:3.01:41,3,0	0/1:26,3:29:14.21:165,0,14	1/1:13,0:14:14.98:138,15,0	0/1:21,1:26:20.69:271,0,21	1/1:18,1:20:20.95:219,21,0	./.	0/1:9,0:8:0:1,0,0	0/1:18,0:18:0:0,0,0	1/1:10,0:10:2.88:22,3,0	0/0:14,0:15:5.85:0,6,44	0/0:26,0:24:29.90:0,30,303	./.	1/1:13,4:18:9.49:108,9,0	1/1:10,0:10:3.45:23,3,0	1/1:6,1:8:3.01:44,3,0
chr10	85058860	.	T	TCC	1330.51	PASS	AB=0.699;AC=37;AF=0.661;AN=56;BaseQRankSum=2.486;DP=404;FS=12.236;HRun=9;HaplotypeScore=77.7563;InbreedingCoeff=0.5948;MQ=80.82;MQ0=4;MQRankSum=-0.930;QD=6.93;ReadPosRankSum=-1.500;VQSLOD=-0.6427;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,8:11:12.04:185,12,0	1/1:4,1:5:9.02:118,9,0	0/0:46,0:26:45.64:0,46,492	0/0:61,0:32:36.90:0,37,360	0/0:19,0:19:36.05:0,36,381	0/0:18,0:18:15.46:0,15,359	1/1:10,0:17:5.50:37,6,0	1/1:14,0:13:3.01:36,3,0	1/1:2,0:8:12.48:43,12,0	1/1:2,3:6:5.99:67,6,0	1/1:4,1:5:3.01:46,3,0	1/1:5,2:7:3.01:45,3,0	0/1:5,3:8:0:0,0,0	1/1:5,3:9:3.01:45,3,0	1/1:4,6:10:3.01:46,3,0	1/1:4,0:11:17.47:60,17,0	1/1:7,10:19:26.58:367,27,0	1/1:6,11:19:13.37:207,13,0	0/1:6,0:13:18.39:26,0,18	1/1:1,0:5:10.33:45,10,0	0/1:7,0:11:18.46:33,0,18	1/1:4,1:6:8.30:68,8,0	0/0:9,0:9:19.12:0,19,212	0/0:34,0:32:70.64:0,71,720	1/1:1,0:1:2.50:9,2,0	0/0:14,0:14:23.93:0,24,240	1/1:2,0:4:10.08:36,10,0	0/0:7,0:7:11.99:0,12,128
chr10	85059040	.	A	AC	2212.65	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-7.822;DP=424;FS=3.009;HRun=7;HaplotypeScore=46.9608;InbreedingCoeff=0.9759;MQ=82.71;MQ0=0;MQRankSum=-0.282;QD=25.14;ReadPosRankSum=0.158;VQSLOD=3.7823;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:90.14:0,90,868	1/1:0,5:5:15.05:181,15,0	0/0:13,0:13:21:0,21,192	0/0:12,0:12:20.99:0,21,193	0/0:11,0:11:30.05:0,30,290	0/0:12,0:12:30.03:0,30,284	0/0:30,0:30:69.08:0,69,659	0/0:20,0:20:36.05:0,36,347	1/1:2,12:14:32.75:382,33,0	1/1:1,11:12:30.09:362,30,0	1/1:3,5:8:21.05:241,21,0	0/0:15,0:15:42.05:0,42,400	0/0:9,0:9:21.03:0,21,202	0/0:11,0:11:24.03:0,24,232	1/1:2,9:11:18.06:217,18,0	0/0:12,0:11:27.04:0,27,261	1/1:7,31:38:84.26:1015,84,0	0/0:24,0:24:60.09:0,60,578	0/0:7,0:7:15.02:0,15,145	0/0:5,0:5:15.02:0,15,145	0/0:34,0:34:76.42:0,76,897	0/0:9,0:9:21.03:0,21,201	0/0:11,0:11:30.05:0,30,289	0/0:23,0:23:62.98:0,63,582	0/0:11,0:11:24.01:0,24,224	0/0:15,0:15:12.75:0,13,321	0/0:9,0:9:27.04:0,27,260	0/0:7,0:7:18.02:0,18,173
chr10	85059832	.	G	GC	3935.30	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-7.993;DP=545;FS=14.862;HRun=4;HaplotypeScore=60.7292;InbreedingCoeff=0.9795;MQ=88.81;MQ0=0;MQRankSum=0.262;QD=36.44;ReadPosRankSum=3.344;VQSLOD=2.4335;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.25:0,96,1077	1/1:1,7:8:21.07:287,21,0	0/0:23,0:23:33.28:0,33,521	0/0:17,0:17:36.90:0,37,411	0/0:22,0:22:66.19:0,66,747	0/0:19,0:19:48.13:0,48,544	0/0:38,0:38:99:0,105,1190	0/0:28,0:28:78.17:0,78,863	1/1:1,12:13:33.11:450,33,0	1/1:0,22:22:66.21:878,66,0	1/1:0,12:12:27.09:368,27,0	0/0:20,0:20:60.17:0,60,681	0/0:6,0:6:18.05:0,18,204	0/0:12,0:12:36.10:0,36,408	1/1:1,25:27:75.23:1008,75,0	0/0:26,0:26:72.20:0,72,817	1/1:2,24:26:69.23:944,69,0	0/0:15,1:16:7.10:0,7,469	0/0:23,0:23:57.12:0,57,632	0/0:15,0:15:45.13:0,45,510	0/0:13,0:13:39.11:0,39,442	0/0:9,0:9:24.07:0,24,271	0/0:13,0:13:36.10:0,36,406	0/0:12,0:12:30.08:0,30,340	0/0:20,0:20:57.16:0,57,646	0/0:33,1:34:52.21:0,52,964	0/0:19,0:19:54.14:0,54,602	0/0:18,0:18:51.10:0,51,564
chr10	85060488	.	TG	T	2190.14	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=1.904;DP=500;FS=7.371;HRun=9;HaplotypeScore=64.4156;InbreedingCoeff=0.9616;MQ=83.38;MQ0=0;MQRankSum=-0.734;QD=19.73;ReadPosRankSum=4.128;VQSLOD=4.2317;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.23:0,87,982	1/1:1,6:7:12.01:110,12,0	0/0:20,0:20:35.54:0,36,333	0/0:12,0:12:21.06:0,21,235	0/0:15,0:15:30.04:0,30,330	0/0:13,0:13:33.10:0,33,379	0/0:37,1:38:65.79:0,66,999	0/0:26,0:26:72.19:0,72,809	1/1:3,9:12:30.01:274,30,0	1/1:2,17:19:49.84:444,50,0	1/1:6,11:17:42.01:380,42,0	0/0:6,0:22:42.95:0,43,257	0/0:3,0:13:28.58:0,29,164	0/0:2,0:17:31.09:0,31,155	1/1:1,22:23:60.03:549,60,0	0/0:7,0:13:14.20:0,14,72	1/1:6,27:33:12.08:617,12,0	0/0:15,0:16:41.96:0,42,464	0/0:7,0:22:50.88:0,51,315	0/0:2,0:10:14.23:0,14,75	0/0:9,0:15:8.63:0,9,63	0/0:7,0:15:22.62:0,23,125	0/0:7,0:7:18.05:0,18,207	0/0:27,0:27:63.19:0,63,727	0/0:4,0:16:25.77:0,26,150	0/0:16,0:16:33.10:0,33,381	0/0:4,0:13:18.29:0,18,89	0/0:10,0:10:26.97:0,27,270
chr10	85060724	.	G	GA	1543.54	PASS	AB=0.789;AC=14;AF=0.250;AN=56;BaseQRankSum=-3.333;DP=485;FS=0.522;HRun=10;HaplotypeScore=65.2089;InbreedingCoeff=0.5895;MQ=71.36;MQ0=10;MQRankSum=-1.353;QD=10.50;ReadPosRankSum=-2.394;VQSLOD=2.2896;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,15:33:59.33:602,59,0	0/0:5,0:5:8.96:0,9,74	0/0:35,0:18:27.37:0,27,215	0/0:21,0:12:8:0,8,112	0/0:24,0:24:55.42:0,55,442	0/0:12,0:12:14.94:0,15,123	0/0:24,0:26:39.25:0,39,416	0/0:24,0:22:47.86:0,48,388	0/0:6,0:6:11.97:0,12,99	0/0:21,1:22:8.99:0,9,269	0/0:14,0:14:17.79:0,18,252	0/0:14,1:15:6.95:0,7,263	0/0:11,0:11:17.95:0,18,148	0/0:11,0:10:14.95:0,15,123	0/0:13,0:13:29.47:0,29,245	1/1:2,10:12:25.31:259,25,0	0/0:24,0:25:28.20:0,28,288	0/0:24,0:23:56.85:0,57,461	0/1:3,8:10:10.01:89,0,10	1/1:5,5:10:19.13:177,19,0	1/1:4,8:12:12.50:129,13,0	0/0:14,0:14:26.93:0,27,218	0/1:14,0:15:4.54:5,0,170	0/0:19,0:19:38.90:0,39,320	0/1:3,8:11:12.61:84,0,13	0/0:15,0:15:6.52:0,7,218	1/1:9,9:17:36.07:369,36,0	0/1:23,0:25:8.97:9,0,217
chr10	85060740	.	G	GGAGA	293.62	PASS	AB=1.000;AC=22;AF=0.440;AN=50;BaseQRankSum=-0.942;DP=448;FS=35.499;HRun=0;HaplotypeScore=94.5816;InbreedingCoeff=0.2941;MQ=56.75;MQ0=23;MQRankSum=-0.894;QD=1.27;ReadPosRankSum=-1.167;VQSLOD=0.0349;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:20.63:0,21,179	0/0:5,0:5:1.25:0,1,3	./.	./.	0/1:21,0:21:14.30:14,0,39	1/1:11,0:11:1.82:5,2,0	1/1:27,0:27:17.16:107,17,0	1/1:27,0:25:2.84:14,3,0	0/0:3,0:5:3:0,3,28	1/1:21,0:19:6.66:60,7,0	0/0:14,0:13:4.53:0,5,42	0/0:17,0:18:20.81:0,21,193	0/0:12,0:11:9:0,9,81	0/1:10,0:8:10.25:10,0,47	1/1:15,0:14:3.01:49,3,0	1/1:11,0:11:3:25,3,0	0/1:22,0:21:35.30:35,0,65	0/0:26,0:25:13.25:0,13,176	0/1:13,0:12:21.19:21,0,67	./.	0/0:8,0:8:3.01:0,3,34	0/0:10,0:10:3.01:0,3,31	0/0:11,0:11:3.01:0,3,34	1/1:19,0:18:3.11:8,3,0	0/0:9,0:9:0:0,0,0	1/1:13,4:17:5.97:88,6,0	0/0:15,0:15:14.54:0,15,189	1/1:18,0:15:0.94:1,1,0
chr10	85061133	.	TTG	T	4591.10	PASS	AB=0.862;AC=27;AF=0.482;AN=56;BaseQRankSum=2.908;DP=609;FS=2.236;HRun=0;HaplotypeScore=97.9904;InbreedingCoeff=0.4948;MQ=69.43;MQ0=5;MQRankSum=-1.977;QD=12.24;ReadPosRankSum=3.170;VQSLOD=4.8274;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:33:31.16:229,31,0	0/0:6,0:11:11.66:0,12,104	0/1:39,1:23:20.30:20,0,125	0/0:27,0:17:14.70:0,15,240	0/0:15,0:15:26.11:0,26,466	0/1:19,4:23:19.79:20,0,594	0/1:29,2:31:11.47:11,0,720	0/0:12,0:17:15.01:0,15,150	0/0:3,0:11:18:0,18,158	0/0:11,0:31:73.42:0,73,674	0/0:6,0:14:20.69:0,21,184	1/1:3,17:21:3.62:497,4,0	1/1:6,10:16:27.08:318,27,0	1/1:4,15:20:41.79:452,42,0	0/0:7,0:20:29.99:0,30,263	1/1:0,11:11:30.09:352,30,0	0/0:9,0:34:65.99:0,66,598	0/0:18,2:20:12.86:0,13,674	1/1:4,6:11:20.87:212,21,0	1/1:5,16:21:45.13:530,45,0	0/1:14,28:43:19.87:694,0,20	1/1:4,16:22:41.79:452,42,0	0/1:15,3:19:66.87:67,0,362	0/0:33,0:33:63.21:0,63,994	1/1:7,16:23:36.11:424,36,0	0/1:17,1:18:2.23:2,0,440	1/1:1,9:10:24.07:283,24,0	0/1:10,1:12:28.42:28,0,215
chr10	85061272	.	C	CGAGA	1573.23	PASS	AB=0.923;AC=33;AF=0.688;AN=48;BaseQRankSum=-0.954;DP=536;FS=0.000;HRun=0;HaplotypeScore=117.7244;InbreedingCoeff=-0.0242;MQ=69.06;MQ0=3;MQRankSum=0.535;QD=3.74;ReadPosRankSum=-3.404;VQSLOD=1.3547;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,1:28:16.87:46,0,17	./.	./.	./.	0/1:17,0:18:37.02:40,0,37	1/1:11,5:20:6.02:141,6,0	0/0:12,0:12:8.04:0,8,62	1/1:11,0:11:7.84:134,8,0	0/1:9,0:9:33.14:33,0,80	1/1:19,0:19:18.53:352,19,0	1/1:16,0:15:3.01:50,3,0	0/1:17,4:22:40.24:63,0,40	1/1:18,1:23:8.76:120,9,0	0/1:15,0:15:0:0,0,0	./.	0/1:12,0:12:0:0,0,0	0/1:22,6:29:16.36:125,0,16	0/0:19,0:19:5.82:0,6,55	1/1:13,0:13:0.47:1,0,0	1/1:25,0:25:3.47:26,3,0	0/1:18,0:18:19.06:28,0,19	1/1:19,0:22:2.74:12,3,0	0/1:32,0:32:48.62:96,0,49	0/1:20,0:27:6.82:7,0,149	0/1:22,0:19:0:0,0,0	1/1:16,0:16:18.99:259,19,0	1/1:12,3:15:3.01:69,3,0	1/1:5,0:5:6.02:103,6,0
chr10	85062061	.	GTC	G	1985.62	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.317;DP=643;FS=9.195;HRun=0;HaplotypeScore=92.3096;InbreedingCoeff=0.9217;MQ=65.84;MQ0=11;MQRankSum=-0.948;QD=25.46;ReadPosRankSum=-1.723;VQSLOD=3.8431;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:34.03:0,34,528	0/0:8,0:8:21.06:0,21,356	0/0:52,0:27:47.52:0,48,764	0/0:44,0:14:1.44:0,1,162	0/0:16,0:16:42.14:0,42,695	0/0:26,0:26:69.20:0,69,1107	1/1:4,22:26:45.09:599,45,0	1/1:7,33:40:99:1249,99,0	0/0:20,0:20:57.20:0,57,977	0/0:19,0:19:45.15:0,45,756	0/0:9,0:9:27.09:0,27,461	0/0:22,0:22:30.57:0,31,512	0/0:23,0:23:27.04:0,27,407	0/0:20,0:20:36.04:0,36,542	0/0:26,0:26:72.25:0,72,1240	0/0:35,0:35:87.30:0,87,1475	0/0:30,0:30:87.30:0,87,1493	1/1:0,12:12:21.07:279,21,0	0/0:23,0:22:60.19:0,60,985	0/0:10,0:10:27.06:0,27,388	0/0:27,0:27:66.70:0,67,1140	0/0:16,0:16:24.06:0,24,543	0/0:14,0:14:42.13:0,42,686	0/0:24,0:24:66.23:0,66,1141	0/0:12,0:12:36.12:0,36,607	0/0:25,0:25:69.24:0,69,1187	0/0:24,0:24:66.17:0,66,1018	0/0:15,0:15:42.14:0,42,686
chr10	85062089	.	GTCTCTGTCTCTGTCTCTC	G	2478.15	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.092;DP=638;FS=1.395;HRun=0;HaplotypeScore=254.0803;InbreedingCoeff=0.9838;MQ=59.45;MQ0=12;MQRankSum=-6.836;QD=35.40;ReadPosRankSum=-1.408;VQSLOD=2.0520;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:20.99:0,21,401	0/0:7,0:7:21.07:0,21,1384	0/0:35,0:14:23.64:0,24,732	0/0:46,0:13:17.56:0,18,201	0/0:19,0:19:57.20:0,57,3281	0/0:27,0:27:78.27:0,78,4265	0/0:26,0:26:50.36:0,50,2007	0/0:37,0:37:93.28:0,93,3397	0/0:20,0:20:45.15:0,45,1981	0/0:21,0:21:63.22:0,63,3106	0/0:10,0:10:24.08:0,24,1089	1/1:2,15:17:15.05:414,15,0	1/1:2,20:23:27.09:815,27,0	1/1:2,12:14:15.05:540,15,0	0/0:27,0:27:57.16:0,57,2938	0/0:30,0:30:84.27:0,84,4812	0/0:36,0:36:75.26:0,75,4355	0/0:16,0:15:32.78:0,33,1310	0/0:13,0:12:24.08:0,24,1064	0/0:12,0:12:33.11:0,33,2049	0/0:34,0:34:90.28:0,90,4473	1/1:11,5:16:42.09:866,42,0	0/0:18,0:18:48.16:0,48,2582	0/0:25,0:25:69.24:0,69,4158	0/0:21,0:21:51.15:0,51,2175	0/0:24,0:24:66.22:0,66,3433	0/0:24,0:24:69.20:0,69,3778	0/0:9,0:9:27.09:0,27,2006
chr10	85062160	.	AGT	A	2114.87	PASS	AB=0.944;AC=38;AF=0.679;AN=56;BaseQRankSum=9.324;DP=646;FS=2.116;HRun=0;HaplotypeScore=131.9852;InbreedingCoeff=0.6338;MQ=55.06;MQ0=25;MQRankSum=0.324;QD=5.70;ReadPosRankSum=2.195;VQSLOD=3.0496;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:25:2.44:33,2,0	1/1:3,0:5:0.34:29,0,0	0/0:64,0:17:10.38:0,10,78	0/0:77,0:25:14.27:0,14,122	0/0:19,0:19:36.11:0,36,516	0/0:17,0:17:21.05:0,21,293	1/1:12,0:12:3.95:10,4,0	0/0:45,0:44:13.27:0,13,109	1/1:15,0:19:13.05:70,13,0	1/1:15,0:18:22.64:100,23,0	1/1:9,0:12:13.79:62,14,0	1/1:16,0:16:10.94:50,11,0	1/1:16,0:16:6.49:46,6,0	1/1:10,0:10:8.10:34,8,0	1/1:8,0:12:8.39:63,8,0	1/1:10,14:24:48.14:549,48,0	1/1:23,0:26:5.28:50,5,0	0/1:25,1:27:11.66:12,0,43	1/1:12,6:18:17.86:169,18,0	1/1:4,13:17:15.04:172,15,0	1/1:34,4:38:33.97:372,34,0	1/1:18,0:18:4.25:35,4,0	0/0:16,0:16:32.88:0,33,448	0/0:31,0:31:66.63:0,67,918	1/1:8,7:16:9.03:102,9,0	0/1:21,1:22:19.68:20,0,361	1/1:8,8:18:32.71:330,33,0	0/0:6,0:6:4.95:0,5,90
chr10	85062185	.	GTGTA	G	5989.64	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=10.392;DP=563;FS=10.587;HRun=0;HaplotypeScore=133.6846;InbreedingCoeff=0.6038;MQ=48.51;MQ0=30;MQRankSum=-3.323;QD=12.56;ReadPosRankSum=-0.159;VQSLOD=3.8690;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:20.21:130,20,0	1/1:7,0:6:15:141,15,0	0/1:48,0:15:35.25:41,0,35	0/1:50,0:11:22.57:23,0,88	0/0:23,0:23:43.37:0,43,1056	0/0:11,0:11:26.97:0,27,381	1/1:11,0:11:17.52:139,18,0	1/1:32,0:29:32.75:386,33,0	1/1:16,0:16:35.75:286,36,0	1/1:18,0:18:53.58:419,54,0	1/1:16,0:15:14.98:138,15,0	1/1:10,3:13:12.26:249,12,0	1/1:14,5:19:38.84:464,39,0	1/1:8,3:11:24.02:311,24,0	1/1:12,0:12:26.93:230,27,0	1/1:26,0:26:64.52:751,65,0	1/1:27,0:26:6.25:227,6,0	1/1:24,0:24:17.22:336,17,0	0/1:16,0:15:17.60:86,0,18	1/1:17,0:17:22.92:257,23,0	1/1:30,0:29:49.62:398,50,0	1/1:2,16:18:17.64:264,18,0	0/0:17,0:17:38.97:0,39,647	0/0:29,0:29:52.08:0,52,1242	1/1:12,0:12:17.27:186,17,0	0/1:24,0:24:7.88:8,0,820	1/1:13,0:13:38.58:521,39,0	0/0:6,0:6:17.49:0,17,138
chr10	85062189	.	ATG	A	2482.24	PASS	AB=0.935;AC=37;AF=0.661;AN=56;BaseQRankSum=7.741;DP=553;FS=2.922;HRun=0;HaplotypeScore=131.2186;InbreedingCoeff=0.4212;MQ=49.83;MQ0=27;MQRankSum=-1.713;QD=6.62;ReadPosRankSum=2.763;VQSLOD=3.3141;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,2:14:8.60:90,0,9	1/1:3,0:5:13.55:60,14,0	0/0:45,0:17:21.28:0,21,185	0/0:47,0:13:14.79:0,15,149	0/0:24,0:24:19.28:0,19,708	0/0:10,0:10:21.07:0,21,314	1/1:12,0:12:9.95:42,10,0	0/1:31,0:28:13.06:27,0,13	1/1:12,0:16:8.72:41,9,0	1/1:15,0:18:11.96:51,12,0	1/1:6,0:16:8.48:41,8,0	0/1:12,0:14:22.29:37,0,22	1/1:20,0:20:16.69:60,17,0	1/1:12,0:12:9.93:38,10,0	1/1:7,0:11:9.42:42,9,0	1/1:11,14:25:56.32:584,56,0	0/1:23,0:25:6.61:37,0,7	0/1:23,0:24:7.09:7,0,46	1/1:14,1:13:11.70:112,12,0	1/1:9,8:17:24.07:280,24,0	1/1:26,4:29:36.45:387,36,0	1/1:18,0:19:2.58:45,3,0	0/1:15,1:16:5.22:5,0,383	0/0:29,0:29:12.97:0,13,630	1/1:8,4:12:17.64:184,18,0	0/0:23,0:23:35.35:0,35,606	1/1:4,10:14:42.12:477,42,0	0/1:6,0:6:26.31:26,0,75
chr10	85062331	.	TTC	T	41.27	PASS	AB=0.847;AC=4;AF=0.071;AN=56;BaseQRankSum=3.024;DP=267;FS=13.940;HRun=0;HaplotypeScore=45.2365;InbreedingCoeff=0.2509;MQ=84.10;MQ0=3;MQRankSum=-0.148;QD=1.38;ReadPosRankSum=-1.117;VQSLOD=-0.1737;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,1:5:13.20:118,13,0	0/0:4,0:4:11.97:0,12,115	0/0:25,0:17:37.88:0,38,471	0/0:27,0:12:17.41:0,17,191	0/0:7,0:7:12:0,12,119	0/0:5,0:5:15.02:0,15,195	0/0:19,0:19:14.58:0,15,186	0/1:14,4:18:17.32:17,0,242	0/0:7,0:7:20.86:0,21,183	0/0:14,0:14:32.30:0,32,331	0/1:6,1:7:12.76:13,0,108	0/0:10,0:10:23.71:0,24,239	0/0:9,0:9:16.73:0,17,123	0/0:9,0:9:26.48:0,26,258	0/0:17,0:17:44.41:0,44,333	0/0:7,0:7:10.17:0,10,128	0/0:18,0:18:41.33:0,41,295	0/0:8,0:8:15.03:0,15,250	0/0:2,0:2:5.99:0,6,71	0/0:3,0:3:4.15:0,4,19	0/0:3,0:2:3:0,3,25	0/0:9,0:9:4.84:0,5,106	0/0:5,0:5:14.39:0,14,130	0/0:6,0:6:8.14:0,8,154	0/0:6,0:6:17.91:0,18,139	0/0:8,0:8:17.68:0,18,190	0/0:7,0:7:17.86:0,18,198	0/0:1,0:1:3:0,3,26
chr10	85062332	.	TC	T	1324.39	PASS	AB=0.910;AC=30;AF=0.577;AN=52;BaseQRankSum=-2.455;DP=262;FS=16.127;HRun=11;HaplotypeScore=36.0337;InbreedingCoeff=0.3445;MQ=83.08;MQ0=3;MQRankSum=-1.018;QD=6.83;ReadPosRankSum=4.039;VQSLOD=0.2300;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:4:2.57:3,0,7	1/1:4,0:4:2.98:25,3,0	0/0:26,0:16:16.70:0,17,148	0/1:28,0:13:10.91:11,0,62	0/0:7,0:7:0:0,0,0	0/0:5,0:5:5.22:0,5,32	1/1:5,11:18:20.01:137,20,0	0/1:13,1:18:3.61:40,0,4	1/1:3,3:6:11.19:81,11,0	0/1:13,1:14:17.73:65,0,18	1/1:5,2:7:10.97:79,11,0	1/1:5,4:10:15.37:88,15,0	1/1:7,2:9:7.25:66,7,0	1/1:9,0:9:12.71:74,13,0	1/1:5,12:17:29.93:246,30,0	1/1:3,2:7:11:80,11,0	1/1:4,11:16:35:276,35,0	0/0:7,0:7:11.92:0,12,109	0/0:2,0:2:2.99:0,3,24	0/0:2,0:3:2.74:0,3,12	./.	1/1:4,5:9:17.93:141,18,0	0/1:4,1:5:12.70:13,0,51	0/0:5,0:6:2.24:0,2,58	1/1:4,2:6:5.96:49,6,0	0/0:8,0:8:2.96:0,3,19	0/1:6,1:7:12.94:13,0,44	./.
chr10	85063394	.	TC	T	2107.19	PASS	AB=0.787;AC=25;AF=0.446;AN=56;BaseQRankSum=2.653;DP=298;FS=4.825;HRun=10;HaplotypeScore=41.2429;InbreedingCoeff=0.6004;MQ=79.40;MQ0=1;MQRankSum=-1.702;QD=11.58;ReadPosRankSum=4.341;VQSLOD=2.3173;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:41.99:365,42,0	0/0:3,0:3:3.01:0,3,33	0/0:18,0:17:34.03:0,34,287	0/1:3,1:3:9.72:41,0,10	0/1:7,3:10:53.63:54,0,134	0/0:4,0:4:6.02:0,6,66	1/1:1,0:15:26.48:78,26,0	1/1:3,0:14:16.29:48,16,0	0/1:9,1:10:5.03:5,0,165	0/0:7,0:8:23.90:0,24,247	0/0:4,0:4:8.98:0,9,86	0/0:12,1:13:1.03:0,1,225	0/0:9,0:9:18.02:0,18,181	0/1:9,1:10:5:5,0,169	0/0:8,0:8:18.51:0,19,193	1/1:3,10:13:23.97:208,24,0	0/0:12,0:12:6.30:0,6,260	1/1:1,0:12:20.15:59,20,0	1/1:1,5:6:14.99:130,15,0	0/1:2,9:11:2.68:204,0,3	1/1:1,20:22:50.02:422,50,0	0/0:8,0:8:18.03:0,18,190	0/0:9,0:9:10.84:0,11,105	0/0:14,0:14:33.05:0,33,339	1/1:1,10:11:23.99:208,24,0	1/1:1,9:10:20.99:182,21,0	1/1:2,15:17:34.18:299,34,0	0/0:6,0:6:18.05:0,18,199
chr10	85064090	.	AAGGACAGGGTGTT	A	6602.84	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.855;DP=658;FS=1.706;HRun=0;HaplotypeScore=242.7523;InbreedingCoeff=0.9933;MQ=93.42;MQ0=1;MQRankSum=-12.062;QD=83.58;ReadPosRankSum=3.014;VQSLOD=4.7544;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,6709	0/0:7,0:7:18.06:0,18,1023	0/0:34,0:32:81.17:0,81,3850	0/0:33,0:34:74.32:0,74,3552	0/0:17,0:17:51.18:0,51,3137	0/0:20,0:20:48.16:0,48,2862	0/0:34,0:34:99:0,99,5542	0/0:30,0:30:81.27:0,81,4350	0/0:17,0:17:45.15:0,45,2808	0/0:18,0:18:51.18:0,51,3222	0/0:18,0:18:48.16:0,48,3103	1/1:4,18:22:45.15:1783,45,0	1/1:1,16:17:45.15:1779,45,0	1/1:4,17:21:36.12:1426,36,0	0/0:30,0:30:84.27:0,84,4885	0/0:31,0:31:87.30:0,87,5203	0/0:33,0:33:99:0,99,6294	0/0:25,0:25:75.24:0,75,4435	0/0:18,0:18:54.19:0,54,3157	0/0:17,0:17:51.18:0,51,3315	0/0:37,0:37:99:0,105,6601	1/1:2,17:19:45.11:1615,45,0	0/0:20,0:20:56.61:0,57,3394	0/0:20,0:20:54.19:0,54,3290	0/0:19,0:19:51.17:0,51,2786	0/0:24,0:24:72.23:0,72,4241	0/0:33,0:33:96.33:0,96,6165	0/0:5,0:5:15.05:0,15,853
chr10	85066158	.	TGATGCCTTGG	T	7520.23	PASS	AB=0.958;AC=13;AF=0.232;AN=56;BaseQRankSum=13.233;DP=614;FS=1.467;HRun=0;HaplotypeScore=185.6262;InbreedingCoeff=0.8616;MQ=89.84;MQ0=0;MQRankSum=-13.764;QD=54.10;ReadPosRankSum=3.593;VQSLOD=4.6751;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,5588	1/1:1,11:12:21.07:593,21,0	0/0:22,0:22:66.23:0,66,3065	0/0:28,0:28:69.23:0,69,2905	0/0:18,0:18:54.19:0,54,2859	0/0:26,0:26:78.27:0,78,4120	0/0:33,0:33:96.31:0,96,4608	0/0:30,0:30:81.28:0,81,4063	1/1:1,22:23:54.19:1731,54,0	1/1:3,12:15:36.12:1186,36,0	1/1:0,4:4:3.01:99,3,0	0/0:25,0:25:75.26:0,75,3953	0/0:20,0:20:57.18:0,57,2856	0/0:27,0:27:75.26:0,75,3857	1/1:2,28:30:72.25:2349,72,0	0/1:22,1:23:32.61:33,0,3269	1/1:9,23:32:48.16:1530,48,0	0/0:28,0:28:84.29:0,84,4193	0/0:16,0:16:45.15:0,45,2335	0/0:22,0:22:66.23:0,66,3348	0/0:21,0:21:60.21:0,60,2921	0/0:11,0:11:33.11:0,33,1725	0/0:16,0:16:45.15:0,45,2331	0/0:27,0:28:78.27:0,78,3924	0/0:19,0:19:57.20:0,57,2745	0/0:16,0:16:48.16:0,48,2496	0/0:24,0:24:66.23:0,66,3382	0/0:6,0:6:18.06:0,18,774
chr10	85067371	.	A	ACC	2205.45	PASS	AB=0.731;AC=31;AF=0.574;AN=54;BaseQRankSum=2.916;DP=322;FS=0.549;HRun=10;HaplotypeScore=50.1523;InbreedingCoeff=0.5048;MQ=81.31;MQ0=0;MQRankSum=-0.553;QD=10.55;ReadPosRankSum=-1.379;VQSLOD=0.2267;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:23:27.45:97,27,0	./.	0/0:13,0:13:11.72:0,12,100	0/1:7,0:7:12.79:18,0,13	0/0:8,0:8:21.03:0,21,207	0/0:9,0:9:20.78:0,21,195	0/0:33,0:33:72.11:0,72,732	1/1:11,5:18:13.61:118,14,0	1/1:1,3:5:6.02:90,6,0	1/1:2,5:7:7.55:72,8,0	1/1:1,3:5:5.98:88,6,0	1/1:3,6:10:12.04:179,12,0	1/1:0,6:8:11.53:143,12,0	1/1:1,6:9:15.04:207,15,0	1/1:4,11:18:34.92:434,35,0	1/1:2,10:12:24.08:358,24,0	1/1:6,9:16:20.56:277,21,0	0/0:14,0:14:36.05:0,36,366	0/1:4,0:11:10.41:39,0,10	0/1:5,0:5:13.73:14,0,25	0/1:12,0:32:59.60:60,0,105	1/1:2,3:5:6.02:89,6,0	0/0:5,0:5:0.48:0,0,26	0/0:19,0:20:53.83:0,54,530	1/1:2,2:4:5.95:75,6,0	0/0:5,0:7:20.52:0,21,176	0/1:2,0:13:10.17:41,0,10	0/0:3,0:3:8.83:0,9,67
chr10	85067686	.	TGG	T	2085.27	PASS	AB=0.828;AC=25;AF=0.463;AN=54;BaseQRankSum=2.632;DP=498;FS=36.265;HRun=12;HaplotypeScore=74.3196;InbreedingCoeff=0.6343;MQ=73.04;MQ0=0;MQRankSum=-1.333;QD=8.34;ReadPosRankSum=7.334;VQSLOD=-0.6656;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:29:31.78:0,32,348	0/0:11,0:11:3:0,3,26	0/0:27,0:21:39.74:0,40,360	0/0:20,0:16:13.94:0,14,258	0/1:18,1:19:45.85:46,0,62	0/0:20,0:22:44.07:0,44,509	1/1:2,0:23:38.41:166,38,0	1/1:12,6:18:14.99:152,15,0	0/0:14,0:14:18.05:0,18,242	0/0:7,0:7:8.82:0,9,102	0/1:10,0:13:0.02:0,0,0	1/1:8,8:16:26.77:254,27,0	1/1:5,8:14:26.75:253,27,0	1/1:4,8:16:38.03:322,38,0	0/0:22,0:23:22.72:0,23,249	0/1:10,2:18:35.52:63,0,36	0/0:35,1:43:26.93:0,27,558	1/1:2,1:17:35.92:173,36,0	1/1:11,3:15:15.21:134,15,0	1/1:11,1:13:23.75:209,24,0	0/1:9,6:16:4.35:101,0,4	1/1:10,7:17:17.27:234,17,0	./.	0/0:16,0:19:34.94:0,35,407	0/1:14,0:15:6.95:31,0,7	0/0:16,0:16:5.86:0,6,71	1/1:11,9:20:15.01:148,15,0	0/0:4,0:5:6.02:0,6,88
chr10	85069012	.	T	TAAAA	4343.75	PASS	AB=0.810;AC=38;AF=0.679;AN=56;BaseQRankSum=2.693;DP=598;FS=2.733;HRun=16;HaplotypeScore=124.9301;InbreedingCoeff=0.7225;MQ=70.15;MQ0=4;MQRankSum=0.345;QD=10.49;ReadPosRankSum=-5.314;VQSLOD=0.1398;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:27:11.17:134,11,0	1/1:6,4:12:10.39:75,10,0	0/0:35,0:15:7.77:0,8,67	0/0:27,0:21:5.86:0,6,200	0/0:23,0:24:22.16:0,22,252	0/0:26,0:27:26.93:0,27,284	1/1:7,0:20:5.74:50,6,0	1/1:24,0:23:19.88:306,20,0	1/1:8,13:26:30.10:500,30,0	1/1:12,1:26:48:620,48,0	1/1:13,0:23:44.69:412,45,0	1/1:6,0:12:11.60:65,12,0	1/1:13,0:12:14.92:114,15,0	1/1:7,0:19:7.81:62,8,0	1/1:6,10:18:13.83:193,14,0	1/1:8,0:19:12.51:212,13,0	1/1:10,13:29:12.25:198,12,0	0/1:10,0:26:12.79:42,0,13	1/1:15,0:16:20.93:278,21,0	1/1:8,12:27:53.84:680,54,0	1/1:6,0:7:8.24:82,8,0	1/1:7,0:20:20.37:129,20,0	0/1:13,0:15:9.14:9,0,49	0/0:13,0:14:23.95:0,24,238	0/0:12,0:12:5.03:0,5,58	0/0:22,0:23:18.23:0,18,210	1/1:16,0:30:19.73:183,20,0	0/0:17,0:17:13.43:0,13,159
chr10	85070072	.	GAT	G	10194.52	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=14.154;DP=587;FS=11.888;HRun=0;HaplotypeScore=77.9914;InbreedingCoeff=0.9787;MQ=73.02;MQ0=1;MQRankSum=0.421;QD=33.76;ReadPosRankSum=2.272;VQSLOD=6.7604;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,44:44:99:1551,111,0	1/1:0,11:11:30.10:415,30,0	0/0:13,0:13:10.56:0,11,414	0/0:11,0:11:5.65:0,6,288	0/0:24,0:24:69.19:0,69,1114	0/0:16,0:16:45.10:0,45,686	0/0:21,0:21:60.19:0,60,1011	1/1:0,25:25:75.16:940,75,0	1/1:1,27:28:66.22:922,66,0	1/1:4,22:26:66.18:856,66,0	1/1:1,14:15:39.09:523,39,0	0/0:21,0:21:60.19:0,60,1003	0/0:17,0:17:48.13:0,48,770	0/0:18,0:18:51.14:0,51,823	1/1:0,19:19:48.16:671,48,0	1/1:2,24:26:62.70:847,63,0	1/1:1,33:34:75.25:1048,75,0	0/0:18,0:18:51.17:0,51,890	1/1:1,14:15:42.06:485,42,0	1/1:1,19:20:45.08:587,45,0	1/1:0,17:17:42.14:587,42,0	0/0:18,0:18:54.17:0,54,915	0/0:17,0:17:42.06:0,42,639	0/0:21,0:21:63.16:0,63,1011	0/0:29,0:29:78.17:0,78,1193	0/0:26,1:27:30.24:0,30,1085	1/1:1,20:20:56.55:762,57,0	0/0:14,0:14:41.99:0,42,668
chr10	85070409	.	AC	A	2609.92	PASS	AB=0.896;AC=37;AF=0.661;AN=56;BaseQRankSum=5.779;DP=455;FS=11.926;HRun=11;HaplotypeScore=66.8039;InbreedingCoeff=0.6371;MQ=69.25;MQ0=1;MQRankSum=-1.487;QD=7.19;ReadPosRankSum=5.426;VQSLOD=0.6267;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,17:28:44.89:368,45,0	1/1:6,1:7:11.95:98,12,0	0/1:9,1:9:3.46:3,0,65	0/0:19,0:15:2.76:0,3,84	0/1:12,1:13:0.17:0,0,178	0/0:8,0:8:21.04:0,21,213	1/1:5,0:16:27.43:95,27,0	1/1:11,3:14:5.95:49,6,0	0/0:15,0:15:30.05:0,30,299	1/1:3,12:15:21.72:254,22,0	1/1:5,3:8:11.94:94,12,0	1/1:11,10:22:25.91:202,26,0	0/1:13,3:16:39.12:80,0,39	1/1:14,4:18:20.89:169,21,0	1/1:15,13:28:35.84:293,36,0	0/0:24,0:24:47.98:0,48,433	1/1:10,11:21:22.14:235,22,0	1/1:5,11:16:29.94:245,30,0	1/1:19,0:19:24.83:72,25,0	1/1:13,0:13:19.88:57,20,0	1/1:32,0:32:42.40:124,42,0	1/1:7,10:18:31.96:251,32,0	0/0:11,0:11:18.01:0,18,175	0/1:14,2:16:13.21:13,0,263	0/0:7,0:7:15.02:0,15,145	0/1:9,1:10:3.57:4,0,171	1/1:23,0:22:33.83:98,34,0	0/0:8,0:8:12:0,12,112
chr10	85070417	.	CCCCG	C	3678.53	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=1.349;DP=494;FS=5.904;HRun=0;HaplotypeScore=95.3701;InbreedingCoeff=0.9942;MQ=73.00;MQ0=1;MQRankSum=-1.167;QD=38.32;ReadPosRankSum=5.409;VQSLOD=3.6200;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:60.14:0,60,837	0/0:6,0:6:18.04:0,18,250	0/0:12,0:11:19.77:0,20,302	0/0:19,0:15:39.56:0,40,514	0/0:17,0:17:45.97:0,46,822	0/0:11,0:11:33.05:0,33,648	0/0:20,0:20:56.91:0,57,499	0/0:14,0:14:33:0,33,402	0/0:14,0:14:42.13:0,42,899	0/0:19,0:19:53.48:0,53,685	0/0:13,0:13:33.05:0,33,402	0/0:23,0:23:57.06:0,57,742	0/0:15,0:15:39.12:0,39,609	0/0:15,0:15:39.11:0,39,558	0/0:27,0:27:69.12:0,69,958	0/0:24,0:24:68.23:0,68,1301	0/0:22,0:22:54.14:0,54,780	0/0:18,0:18:42.10:0,42,588	1/1:0,23:23:69.09:953,69,0	1/1:0,17:17:44.85:645,45,0	1/1:1,32:33:62.74:1147,63,0	0/0:16,0:16:42.10:0,42,575	0/0:16,0:16:45.02:0,45,730	0/0:16,0:16:48.15:0,48,1000	0/0:8,0:8:24.05:0,24,452	0/0:16,0:16:47.93:0,48,770	1/1:0,23:23:51.17:934,51,0	0/0:9,0:9:21.04:0,21,379
chr10	85071020	.	C	CG	2420.68	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.655;DP=627;FS=9.729;HRun=2;HaplotypeScore=67.8829;InbreedingCoeff=0.9868;MQ=79.50;MQ0=0;MQRankSum=-1.693;QD=36.68;ReadPosRankSum=-2.236;VQSLOD=2.7863;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,44:45:99:1853,129,0	0/0:6,0:6:15.05:0,15,185	0/0:24,0:24:64.85:0,65,754	0/0:13,0:13:29.98:0,30,320	0/0:14,0:14:39.11:0,39,471	0/0:11,0:11:30.09:0,30,371	0/0:34,0:34:99:0,102,1205	1/1:0,21:20:56.91:689,57,0	0/0:15,0:15:42.12:0,42,505	0/0:20,0:20:60.18:0,60,734	0/0:13,0:13:30.09:0,30,370	0/0:32,0:32:96.30:0,96,1185	0/0:21,0:21:60.12:0,60,715	0/0:16,0:16:48.15:0,48,594	0/0:22,0:22:66.16:0,66,798	0/0:28,0:28:84.26:0,84,1039	0/0:36,0:36:99:0,102,1250	0/0:34,0:34:99:0,99,1225	0/0:24,0:24:63.20:0,63,778	0/0:20,0:20:54.15:0,54,644	0/0:43,0:43:99:0,120,1470	0/0:20,0:20:48.10:0,48,566	0/0:12,0:12:32.99:0,33,358	0/0:30,0:30:90.23:0,90,1085	0/0:21,0:21:57.08:0,57,647	0/0:32,0:32:87.27:0,87,1076	0/0:13,0:12:39.08:0,39,450	0/0:7,0:7:18.06:0,18,222
chr10	85072347	.	TTCTGCCTGCCCGGAGGTG	T	6317.23	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.060;DP=540;FS=0.000;HRun=0;HaplotypeScore=255.7328;InbreedingCoeff=0.9971;MQ=84.18;MQ0=0;MQRankSum=-9.825;QD=146.91;ReadPosRankSum=2.871;VQSLOD=4.0259;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:99:0,108,8223	0/0:7,0:7:21.07:0,21,1536	0/0:24,0:24:72.25:0,72,4021	0/0:14,0:14:33.11:0,33,1892	0/0:15,0:15:45.15:0,45,3898	0/0:19,0:19:48.16:0,48,3849	0/0:26,0:26:78.27:0,78,6520	0/0:32,0:32:96.33:0,96,7026	0/0:16,0:16:48.16:0,48,3803	0/0:21,0:21:63.22:0,63,5351	0/0:13,0:13:39.13:0,39,3102	0/0:25,0:25:75.26:0,75,6084	0/0:18,0:18:54.19:0,54,4355	0/0:20,0:20:60.21:0,60,4965	0/0:26,0:26:78.27:0,78,6331	0/0:25,0:25:72.24:0,72,5758	0/0:28,0:28:84.26:0,84,6922	0/0:20,0:20:60.21:0,60,5127	1/1:0,7:7:21.07:1018,21,0	1/1:0,10:10:30.10:1607,30,0	1/1:0,11:11:27.09:1446,27,0	0/0:15,0:15:45.15:0,45,3439	0/0:15,0:15:45.15:0,45,3372	0/0:19,0:19:57.20:0,57,4599	0/0:26,0:26:78.27:0,78,6361	0/0:27,0:27:81.26:0,81,6566	1/1:1,14:15:42.14:2246,42,0	0/0:10,0:10:30.10:0,30,2688
chr10	85072546	.	G	GGT	2473.99	PASS	AB=0.772;AC=32;AF=0.615;AN=52;BaseQRankSum=-2.347;DP=642;FS=10.844;HRun=0;HaplotypeScore=97.4261;InbreedingCoeff=0.3807;MQ=68.68;MQ0=10;MQRankSum=-1.793;QD=5.44;ReadPosRankSum=0.201;VQSLOD=1.7646;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,1:36:11.96:145,12,0	1/1:3,5:8:9.03:134,9,0	./.	./.	0/0:17,0:17:14.91:0,15,148	0/0:17,0:18:0.88:0,1,143	1/1:22,13:36:21.02:363,21,0	1/1:24,0:21:10.54:62,11,0	1/1:7,5:13:6.02:90,6,0	1/1:12,5:17:12.04:180,12,0	0/1:12,7:19:18.01:164,0,18	1/1:13,10:23:21.02:315,21,0	0/1:17,6:23:24.05:81,0,24	1/1:13,7:21:9.03:135,9,0	0/1:12,10:20:0.54:249,0,1	1/1:16,0:21:2.79:26,3,0	0/1:27,12:38:58:116,0,58	0/1:12,4:17:24.05:81,0,24	1/1:21,4:25:11.99:111,12,0	1/1:9,0:18:12:105,12,0	1/1:34,2:50:15:141,15,0	0/1:20,2:23:63.92:75,0,64	0/0:16,0:16:9:0,9,83	0/0:47,0:47:57.10:0,57,599	0/0:18,0:18:6:0,6,244	0/0:12,0:13:14.83:0,15,146	1/1:8,0:16:9:78,9,0	0/0:9,0:10:14.87:0,15,146
chr10	85072819	.	TG	T	1958.36	PASS	AB=0.860;AC=15;AF=0.268;AN=56;BaseQRankSum=7.694;DP=463;FS=4.055;HRun=9;HaplotypeScore=47.7141;InbreedingCoeff=0.6977;MQ=81.15;MQ0=1;MQRankSum=-1.273;QD=14.19;ReadPosRankSum=3.129;VQSLOD=3.4458;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.24:0,87,989	1/1:0,4:4:12.01:110,12,0	0/1:14,2:16:11.47:11,0,229	0/0:13,0:13:33.54:0,34,348	0/0:6,0:6:12.04:0,12,138	0/0:24,1:25:38.71:0,39,682	0/0:21,1:22:32.67:0,33,606	0/0:18,0:19:44.94:0,45,487	1/1:1,14:15:39.02:357,39,0	1/1:5,11:16:30:275,30,0	1/1:1,3:4:9:82,9,0	0/0:27,0:27:63.19:0,63,727	0/0:13,0:13:33.08:0,33,369	0/0:19,1:20:20.67:0,21,483	1/1:1,19:20:57.03:522,57,0	0/0:16,1:19:20.51:0,21,472	1/1:3,27:30:78.03:714,78,0	0/1:12,3:15:40.28:40,0,339	0/0:18,1:19:14.64:0,15,413	0/0:6,0:6:15.04:0,15,173	0/0:29,0:29:69.20:0,69,796	0/0:14,0:14:42.11:0,42,475	0/0:10,0:10:21:0,21,233	0/0:21,0:20:48.14:0,48,554	0/0:10,0:10:27.07:0,27,303	0/1:15,3:18:37.29:37,0,355	0/0:15,0:14:45.13:0,45,519	0/0:4,0:4:12.03:0,12,138
chr10	85072978	.	AC	A	421.09	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.485;DP=398;FS=12.174;HRun=9;HaplotypeScore=48.3433;InbreedingCoeff=0.5640;MQ=79.04;MQ0=0;MQRankSum=-2.380;QD=17.55;ReadPosRankSum=1.444;VQSLOD=2.6303;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.14:0,60,678	0/0:3,0:3:9.03:0,9,104	0/0:12,0:12:5.91:0,6,95	0/0:16,0:16:6.92:0,7,180	0/0:5,0:5:9.03:0,9,104	0/0:14,2:16:11.62:0,12,374	0/0:18,0:19:44.97:0,45,499	0/0:17,0:17:24.06:0,24,267	0/0:15,1:16:11.66:0,12,388	0/0:13,0:13:33.10:0,33,380	0/0:8,0:8:15.04:0,15,173	0/0:19,1:20:26.61:0,27,530	0/0:9,0:9:24.06:0,24,268	0/0:19,0:19:45.13:0,45,516	0/0:16,0:16:42.11:0,42,474	1/1:2,22:24:28.42:514,28,0	0/0:16,1:17:11.65:0,12,379	0/0:19,1:20:29.71:0,30,596	0/0:4,0:12:24.69:0,25,172	0/0:3,0:3:2.97:0,3,20	0/0:8,0:16:0:0,0,0	0/0:5,0:5:15.04:0,15,169	0/0:6,0:6:9.03:0,9,104	0/0:29,1:30:18.63:0,19,680	0/0:16,1:17:17.67:0,18,426	0/0:22,0:22:54.16:0,54,623	0/0:10,0:10:21.17:0,21,122	0/0:4,0:4:9.01:0,9,94
chr10	85073049	.	T	TG	809.53	PASS	AB=1.000;AC=13;AF=0.250;AN=52;BaseQRankSum=-1.648;DP=357;FS=2.396;HRun=8;HaplotypeScore=68.5060;InbreedingCoeff=0.7596;MQ=73.91;MQ0=5;MQRankSum=-0.931;QD=13.27;ReadPosRankSum=-1.408;VQSLOD=3.1310;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:48.02:0,48,437	1/1:1,2:3:2.67:34,3,0	0/0:16,0:12:21.75:0,22,151	0/0:15,0:11:26.77:0,27,219	./.	0/0:14,0:14:32.37:0,32,282	0/0:26,0:26:56.99:0,57,516	0/0:11,0:11:8.93:0,9,74	1/1:4,7:11:18.05:205,18,0	1/1:2,1:3:6.01:61,6,0	1/1:3,2:5:10.26:98,10,0	0/0:16,0:16:16.68:0,17,257	0/0:6,0:6:11.97:0,12,102	0/0:10,0:10:23.94:0,24,206	1/1:4,4:8:9.03:104,9,0	0/0:16,0:16:35.99:0,36,321	1/1:8,17:25:20.66:467,21,0	0/0:27,0:26:13.71:0,14,344	0/0:11,0:11:23.75:0,24,204	./.	0/0:28,0:28:60:0,60,543	0/0:3,0:3:2.91:0,3,27	0/0:4,0:4:6.83:0,7,48	0/0:36,0:35:75.96:0,76,686	0/0:7,0:7:15:0,15,136	0/0:19,0:19:33:0,33,302	0/0:10,0:9:14.91:0,15,137	0/1:6,0:6:4.08:4,0,95
chr10	85073063	.	TTGTG	T	686.50	PASS	AB=0.925;AC=13;AF=0.342;AN=38;BaseQRankSum=2.671;DP=375;FS=3.286;HRun=0;HaplotypeScore=78.1109;InbreedingCoeff=0.6262;MQ=64.36;MQ0=11;MQRankSum=-2.823;QD=6.30;ReadPosRankSum=1.887;VQSLOD=1.8232;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:24.08:0,24,401	./.	./.	./.	1/1:8,0:8:1.56:6,2,0	0/0:15,0:15:5.75:0,6,82	0/0:24,0:23:18.06:0,18,386	./.	1/1:5,2:6:9.03:138,9,0	./.	./.	0/0:16,0:17:8.99:0,9,155	0/0:5,0:5:3.01:0,3,53	0/0:12,0:13:12.04:0,12,194	1/1:5,1:6:6.02:91,6,0	1/1:8,0:14:21.02:195,21,0	1/1:23,5:28:24.06:346,24,0	0/0:21,0:25:17.77:0,18,257	0/0:13,0:13:3.01:0,3,69	./.	0/0:39,0:39:20.10:0,20,339	./.	./.	0/1:34,1:35:2.83:3,0,690	0/0:5,0:5:9.03:0,9,211	0/0:19,0:19:6.02:0,6,100	0/0:7,0:7:9.03:0,9,152	1/1:5,2:6:3.01:46,3,0
chr10	85073301	.	A	AC	881.76	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-6.235;DP=265;FS=8.282;HRun=7;HaplotypeScore=31.5179;InbreedingCoeff=0.8073;MQ=75.27;MQ0=0;MQRankSum=-0.297;QD=18.37;ReadPosRankSum=1.139;VQSLOD=2.2538;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:22:47.10:0,47,440	1/1:0,5:5:9.03:109,9,0	0/0:5,0:5:10.26:0,10,90	0/0:8,0:9:17.94:0,18,148	0/0:3,0:3:6.01:0,6,58	0/0:9,0:9:27.04:0,27,260	0/0:17,0:17:48.06:0,48,457	0/0:8,0:8:17.97:0,18,164	1/1:0,6:6:12.04:145,12,0	1/1:5,3:8:6.02:71,6,0	1/1:3,5:8:12.04:145,12,0	0/0:12,0:12:33:0,33,309	0/0:7,0:7:21.03:0,21,202	0/0:7,0:7:21.03:0,21,202	1/1:0,4:4:6.02:72,6,0	0/0:11,0:11:30.05:0,30,290	1/1:2,15:17:42.13:507,42,0	0/0:10,0:11:29.08:0,29,266	0/0:10,0:10:21.03:0,21,203	0/0:3,0:3:6.01:0,6,58	0/0:35,0:35:87.13:0,87,840	0/0:4,0:4:12.02:0,12,116	0/0:2,0:2:5.99:0,6,52	0/0:16,0:16:39.06:0,39,376	0/0:9,0:9:24.04:0,24,231	0/0:12,0:12:36.06:0,36,348	0/0:2,0:2:3:0,3,29	0/0:3,0:3:9.01:0,9,87
chr10	85074034	.	G	GAA	10426.68	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-4.033;DP=341;FS=5.510;HRun=6;HaplotypeScore=91.9016;InbreedingCoeff=0.9279;MQ=85.20;MQ0=0;MQRankSum=-6.336;QD=36.71;ReadPosRankSum=1.915;VQSLOD=4.3613;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:39.13:633,39,0	1/1:0,6:6:15.05:253,15,0	0/0:19,0:19:39.84:0,40,383	0/0:20,0:20:38.57:0,39,407	1/1:3,9:12:18.02:273,18,0	1/1:2,10:12:27.09:455,27,0	1/1:2,14:16:33.11:557,33,0	1/1:4,16:20:47.65:763,48,0	1/1:4,10:14:27.08:456,27,0	1/1:1,11:12:30.09:480,30,0	1/1:3,11:14:30.10:507,30,0	1/1:2,11:13:26.87:457,27,0	1/1:4,13:17:33.11:544,33,0	1/1:0,5:5:15.05:254,15,0	1/1:0,12:12:33.11:558,33,0	0/0:18,0:18:48.15:0,48,578	1/1:3,6:10:21.07:336,21,0	1/1:1,7:8:18.06:303,18,0	1/1:6,9:15:27.09:457,27,0	1/1:4,10:14:27.01:395,27,0	1/1:0,5:5:15.05:254,15,0	1/1:4,5:9:15.05:242,15,0	1/1:2,6:8:18.02:273,18,0	1/1:2,9:11:24.08:405,24,0	1/1:1,2:3:6.02:101,6,0	1/1:0,11:11:33.11:558,33,0	1/1:1,12:13:36.12:609,36,0	1/1:0,6:6:18.06:304,18,0
chr10	85074125	.	CCT	C	246.88	PASS	AB=0.906;AC=13;AF=0.271;AN=48;BaseQRankSum=-0.281;DP=165;FS=7.978;HRun=0;HaplotypeScore=32.2490;InbreedingCoeff=0.0690;MQ=39.59;MQ0=14;MQRankSum=2.411;QD=3.86;ReadPosRankSum=-0.089;VQSLOD=0.1670;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:7:2.97:0,3,20	0/0:2,0:2:2.61:0,3,14	./.	0/0:5,0:3:5.38:0,5,49	0/1:2,1:3:28.18:28,0,31	0/1:11,1:11:19:19,0,152	1/1:8,0:8:3.76:88,4,0	0/0:19,0:15:3.23:0,3,22	0/0:11,0:10:15.39:0,15,65	0/1:13,0:12:5.71:6,0,147	0/0:5,0:6:5.85:0,6,48	1/1:3,2:5:6.02:68,6,0	0/1:1,1:2:2.26:29,0,2	0/0:7,3:7:4.25:0,4,35	0/0:3,0:3:0.47:0,0,1	0/0:4,0:4:6.02:0,6,86	0/1:10,0:9:19.73:20,0,29	0/1:3,0:3:12.75:57,0,13	./.	1/1:3,0:3:2.74:34,3,0	./.	0/1:5,0:5:9.79:28,0,10	0/0:6,0:5:9.03:0,9,126	0/0:6,0:4:9.03:0,9,130	0/0:5,0:4:6.02:0,6,86	0/0:6,0:5:14.53:0,15,85	./.	0/0:3,0:1:0.47:0,0,1
chr10	85074296	.	A	AT	2308.03	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-7.918;DP=450;FS=2.292;HRun=8;HaplotypeScore=47.8832;InbreedingCoeff=0.8935;MQ=72.41;MQ0=1;MQRankSum=1.486;QD=20.07;ReadPosRankSum=-1.634;VQSLOD=2.8306;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:24:45.13:519,45,0	0/0:4,0:4:12.01:0,12,110	0/1:18,0:18:15.99:16,0,255	0/0:13,0:13:20.84:0,21,191	0/0:19,0:19:47.97:0,48,424	0/0:27,0:27:72.03:0,72,658	0/0:19,0:19:48.02:0,48,439	1/1:5,11:16:33.10:381,33,0	0/0:21,0:21:51.02:0,51,467	0/0:14,0:14:39:0,39,349	0/0:12,0:12:30.01:0,30,274	0/0:11,0:11:30:0,30,270	0/0:7,0:7:18.01:0,18,165	0/0:12,0:12:35.96:0,36,316	0/0:12,0:12:27.01:0,27,247	0/0:14,0:14:36.01:0,36,329	0/0:35,0:35:96.03:0,96,871	0/0:16,0:16:48.03:0,48,439	1/1:3,13:16:39.10:440,39,0	1/1:0,13:13:36.11:415,36,0	1/1:2,13:15:36.11:415,36,0	0/0:13,0:13:32.96:0,33,289	0/0:15,0:15:38.95:0,39,342	0/0:18,0:18:42.02:0,42,384	0/0:21,0:21:63.02:0,63,571	0/0:16,0:16:41.98:0,42,371	1/1:2,10:12:27.08:312,27,0	0/0:16,0:16:44.98:0,45,404
chr10	85075943	.	AG	A	2038.82	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.631;DP=469;FS=1.718;HRun=2;HaplotypeScore=46.1543;InbreedingCoeff=0.9716;MQ=67.12;MQ0=1;MQRankSum=-1.017;QD=31.86;ReadPosRankSum=-0.068;VQSLOD=3.0545;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.16:0,57,810	0/0:6,0:6:18.05:0,18,250	0/0:9,0:8:20.95:0,21,257	0/0:7,0:5:11.61:0,12,115	0/0:17,0:17:51.17:0,51,761	0/0:17,0:17:48.16:0,48,709	0/0:15,0:15:45.13:0,45,651	0/0:29,0:29:87.25:0,87,1227	0/0:13,0:13:36.11:0,36,517	0/0:19,0:19:54.14:0,54,733	0/0:23,0:23:66.22:0,66,981	0/0:18,0:18:54.14:0,54,730	0/0:17,0:17:51.17:0,51,761	0/0:13,0:13:39.13:0,39,583	0/0:17,0:17:48.14:0,48,680	0/0:18,0:18:54.17:0,54,787	0/0:42,0:42:99:0,123,1772	0/0:18,0:18:51.14:0,51,739	1/1:1,18:18:54.15:684,54,0	1/1:0,14:14:36.12:466,36,0	1/1:0,14:14:36.12:467,36,0	0/0:10,0:10:30.08:0,30,428	0/0:17,0:17:51.17:0,51,740	0/0:7,0:7:21.07:0,21,314	0/0:23,0:23:69.18:0,69,967	0/0:24,0:24:72.22:0,72,1022	1/1:0,17:17:45.15:583,45,0	0/0:4,0:4:9.50:0,10,135
chr10	85076293	.	T	TCCCA	4663.62	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-10.659;DP=634;FS=6.620;HRun=0;HaplotypeScore=104.1981;InbreedingCoeff=0.9988;MQ=92.25;MQ0=0;MQRankSum=-4.430;QD=64.77;ReadPosRankSum=-2.388;VQSLOD=6.2878;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,46:52:99:3433,129,0	0/0:11,0:11:33.11:0,33,605	0/0:26,0:27:63.20:0,63,1118	0/0:28,0:28:69.23:0,69,1200	0/0:27,0:27:78.25:0,78,1414	0/0:21,0:21:57.20:0,57,1056	0/0:25,0:25:63.20:0,63,1135	1/1:5,13:20:51.14:1231,51,0	0/0:15,0:15:39.13:0,39,728	0/0:25,0:25:69.24:0,69,1283	0/0:24,0:24:66.23:0,66,1220	0/0:23,0:23:69.22:0,69,1253	0/0:27,0:27:72.25:0,72,1344	0/0:16,0:16:42.14:0,42,784	0/0:15,0:15:45.15:0,45,840	0/0:17,0:17:51.16:0,51,921	0/0:34,0:34:99:0,99,1847	0/0:20,0:20:54.11:0,54,910	0/0:24,0:24:69.24:0,69,1283	0/0:24,0:24:66.21:0,66,1201	0/0:19,0:19:57.20:0,57,1064	0/0:24,0:24:72.23:0,72,1313	0/0:17,0:17:51.17:0,51,951	0/0:23,0:22:69.19:0,69,1251	0/0:22,0:22:63.22:0,63,1166	0/0:19,0:19:51.17:0,51,952	0/0:27,0:27:81.28:0,81,1502	0/0:8,0:8:24.08:0,24,448
chr10	85079281	.	G	GC	2414.30	PASS	AB=0.542;AC=9;AF=0.161;AN=56;BaseQRankSum=-8.994;DP=507;FS=10.841;HRun=1;HaplotypeScore=53.6689;InbreedingCoeff=0.8738;MQ=74.83;MQ0=0;MQRankSum=-1.692;QD=34.99;ReadPosRankSum=0.020;VQSLOD=2.5616;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1256	0/0:11,0:11:33.09:0,33,402	0/0:9,0:9:21.06:0,21,259	0/0:13,0:13:33.59:0,34,256	0/0:15,0:15:42.14:0,42,543	0/0:21,0:21:63.16:0,63,771	0/0:22,0:22:60.17:0,60,750	0/0:25,0:25:60.13:0,60,691	0/0:8,0:8:24.08:0,24,311	0/0:18,0:18:48.15:0,48,617	0/0:10,0:10:30.10:0,30,389	0/0:24,0:24:72.19:0,72,891	0/0:22,0:22:63.17:0,63,786	0/0:22,0:22:66.12:0,66,822	0/0:21,0:21:60.19:0,60,778	0/1:2,11:13:11.85:333,0,12	0/0:30,0:30:87.26:0,87,1112	0/0:37,0:37:99:0,111,1327	1/1:0,17:17:51.13:721,51,0	1/1:0,9:9:27.09:404,27,0	1/1:0,19:19:45.15:673,45,0	0/0:9,0:9:27.09:0,27,350	0/0:9,0:9:27.08:0,27,337	0/0:32,0:32:90.25:0,90,1149	0/0:12,0:12:36.06:0,36,447	0/0:19,0:19:57.11:0,57,705	1/1:0,11:11:30.10:449,30,0	0/0:15,0:15:45.14:0,45,570
chr10	85079562	.	A	ATTTTT	2515.62	PASS	AB=0.879;AC=11;AF=0.196;AN=56;BaseQRankSum=8.122;DP=460;FS=0.553;HRun=10;HaplotypeScore=102.9760;InbreedingCoeff=0.6638;MQ=75.90;MQ0=1;MQRankSum=-7.619;QD=23.73;ReadPosRankSum=-5.392;VQSLOD=0.2331;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:80.69:0,81,1211	0/0:7,0:7:21.07:0,21,338	0/1:14,0:12:10.46:10,0,143	0/1:18,0:14:31.25:31,0,192	0/0:21,0:21:57.10:0,57,891	0/0:24,0:24:53.93:0,54,815	0/0:4,0:10:27.02:0,27,322	0/0:27,0:27:66.07:0,66,997	0/0:14,0:14:30:0,30,483	0/0:16,0:17:50.66:0,51,780	0/0:10,0:10:27.08:0,27,432	0/0:16,0:16:39.03:0,39,625	0/0:14,0:14:39.09:0,39,622	0/0:14,0:14:39.09:0,39,623	0/0:23,0:23:29.72:0,30,482	0/1:6,0:14:17.82:152,0,18	0/0:25,0:25:60.10:0,60,940	0/0:13,0:13:30.03:0,30,482	1/1:8,2:12:21.07:490,21,0	1/1:8,1:10:21.05:353,21,0	1/1:11,1:13:18.04:301,18,0	0/0:13,0:13:26.94:0,27,411	0/0:8,0:8:21.02:0,21,338	0/0:14,0:14:36.08:0,36,571	0/0:17,0:18:38.95:0,39,605	0/0:21,0:22:62.65:0,63,974	1/1:13,6:24:60.21:1349,60,0	0/0:15,0:16:38.99:0,39,609
chr10	85079597	.	GA	G	3033.78	PASS	AB=0.783;AC=26;AF=0.464;AN=56;BaseQRankSum=11.602;DP=473;FS=4.090;HRun=12;HaplotypeScore=65.4008;InbreedingCoeff=0.8672;MQ=73.19;MQ0=0;MQRankSum=-1.484;QD=13.85;ReadPosRankSum=0.532;VQSLOD=4.0812;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:29:51.90:0,52,697	1/1:1,10:11:26.89:209,27,0	0/1:13,0:11:12:12,0,35	0/0:17,0:14:11.78:0,12,90	0/0:11,0:12:26.89:0,27,258	0/0:24,0:25:59.94:0,60,588	1/1:2,0:14:22.41:65,22,0	0/0:35,0:35:60.11:0,60,604	1/1:3,9:12:26.87:209,27,0	1/1:5,16:21:47.79:369,48,0	0/1:3,10:13:3.56:158,0,4	0/0:14,0:14:27.92:0,28,265	0/0:13,0:13:30.06:0,30,305	0/0:13,0:13:20.88:0,21,260	1/1:3,13:16:9.87:229,10,0	1/1:1,12:13:35.86:279,36,0	1/1:3,24:27:65.74:511,66,0	1/1:3,0:13:20.36:59,20,0	1/1:7,7:16:27.94:197,28,0	1/1:0,11:11:32.87:255,33,0	1/1:1,9:10:20.91:163,21,0	0/0:15,0:15:39.08:0,39,396	0/0:9,0:10:23.78:0,24,233	0/0:15,0:15:42.07:0,42,421	0/0:17,1:18:21.86:0,22,403	0/0:25,1:26:33.87:0,34,520	1/1:5,24:29:71.36:542,71,0	0/0:12,0:12:21:0,21,199
chr10	85080274	.	T	TC	5231.90	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-2.871;DP=492;FS=0.357;HRun=7;HaplotypeScore=50.2264;InbreedingCoeff=0.9693;MQ=74.97;MQ0=0;MQRankSum=-2.071;QD=22.85;ReadPosRankSum=0.481;VQSLOD=4.4262;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.07:0,63,601	1/1:1,6:7:18.06:217,18,0	0/0:21,0:21:51:0,51,470	0/0:3,0:3:6.01:0,6,56	0/0:24,0:24:66.09:0,66,632	0/0:24,0:24:72.07:0,72,685	1/1:4,13:17:33.10:399,33,0	0/0:33,0:33:72.09:0,72,691	1/1:2,19:21:54.17:652,54,0	1/1:3,25:28:75.22:895,75,0	1/1:0,16:16:42.13:507,42,0	0/0:13,0:13:33.05:0,33,319	0/0:10,0:10:30.05:0,30,290	0/0:5,0:5:6:0,6,58	1/1:1,11:12:33.10:399,33,0	0/0:15,0:15:45.06:0,45,429	1/1:3,14:17:45.13:537,45,0	1/1:2,20:22:51.16:616,51,0	1/1:5,2:26:54.73:300,55,0	1/1:5,1:28:60.49:317,60,0	1/1:1,0:13:28.75:146,29,0	0/0:11,0:11:27.04:0,27,260	0/0:12,0:12:33.05:0,33,319	0/0:12,0:12:36.04:0,36,341	0/0:22,0:22:63.10:0,63,608	0/0:18,0:18:48.08:0,48,464	1/1:2,0:21:48.81:248,49,0	0/0:16,0:16:45.07:0,45,434
chr10	85081778	.	A	ATTT	6794.27	PASS	AB=0.538;AC=23;AF=0.411;AN=56;BaseQRankSum=4.170;DP=587;FS=1.966;HRun=10;HaplotypeScore=93.9414;InbreedingCoeff=0.7774;MQ=71.03;MQ0=0;MQRankSum=-2.621;QD=22.50;ReadPosRankSum=-0.779;VQSLOD=3.3761;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,21:34:51.13:943,51,0	1/1:1,5:7:15.03:252,15,0	0/0:11,0:10:8.95:0,9,103	0/0:11,0:11:13.12:0,13,112	0/0:22,0:22:57.11:0,57,681	0/0:20,0:20:51.13:0,51,620	0/0:23,0:23:69.18:0,69,812	1/1:11,16:28:54.17:968,54,0	1/1:1,18:20:54.18:1019,54,0	1/1:6,15:23:48.15:870,48,0	1/1:2,8:11:27.07:484,27,0	0/0:24,0:24:60.13:0,60,730	0/0:22,0:22:57.12:0,57,681	0/0:15,0:15:42.09:0,42,499	1/1:10,20:33:62.68:1107,63,0	0/1:2,0:21:13.51:25,0,14	1/1:5,24:32:57.11:973,57,0	0/0:17,0:16:45.07:0,45,530	1/1:2,0:15:16.20:38,16,0	0/1:2,0:25:7.44:34,0,7	1/1:1,0:19:22.43:52,22,0	0/0:16,0:16:45.13:0,45,535	0/0:18,0:20:50.96:0,51,569	0/0:26,0:26:68.94:0,69,838	0/0:15,0:15:36.07:0,36,428	0/0:28,0:28:21.84:0,22,712	0/1:8,0:32:30.37:30,0,40	0/0:14,0:14:42.10:0,42,495
chr10	85082624	.	T	TTC	93.56	PASS	AB=1.000;AC=5;AF=0.119;AN=42;BaseQRankSum=-1.686;DP=149;FS=3.557;HRun=0;HaplotypeScore=43.4826;InbreedingCoeff=0.1363;MQ=101.98;MQ0=4;MQRankSum=-1.342;QD=3.34;ReadPosRankSum=1.772;VQSLOD=1.3589;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:11.62:0,12,80	./.	0/0:36,0:15:17.56:0,18,132	0/0:26,0:14:15.26:0,15,133	0/0:1,0:1:3:0,3,27	0/0:4,0:4:11.59:0,12,85	0/1:11,0:11:24.02:44,0,24	./.	./.	0/1:4,0:3:0:0,0,0	./.	0/0:2,0:2:2.94:0,3,18	0/0:2,0:2:5.99:0,6,50	0/0:2,0:2:3:0,3,25	0/0:8,0:8:17.43:0,17,110	0/1:4,0:4:13.95:16,0,14	0/0:8,0:7:5.89:0,6,37	1/1:2,7:9:9.02:133,9,0	./.	0/0:2,0:2:5.92:0,6,38	0/0:3,0:2:2.96:0,3,19	./.	0/0:3,0:3:8.83:0,9,63	0/0:5,0:5:0.37:0,0,21	0/0:2,0:2:3:0,3,27	0/0:4,0:4:10.25:0,10,83	0/0:5,0:5:5.23:0,5,38	./.
chr10	85082654	.	TTC	T	1055.45	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=5.411;DP=201;FS=11.418;HRun=0;HaplotypeScore=26.6926;InbreedingCoeff=0.7824;MQ=81.89;MQ0=0;MQRankSum=-1.381;QD=23.99;ReadPosRankSum=-0.292;VQSLOD=2.3758;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.20:0,57,1045	1/1:0,2:2:6.02:86,6,0	0/0:24,0:16:31.27:0,31,513	0/0:19,0:11:16.30:0,16,276	0/0:5,0:5:15.05:0,15,265	0/0:7,0:7:21.07:0,21,385	0/0:5,0:5:15.05:0,15,275	0/0:5,0:5:15.05:0,15,274	1/1:0,9:9:27.09:387,27,0	1/1:0,6:6:18.04:239,18,0	1/1:0,3:3:9.03:129,9,0	0/0:2,0:2:6.02:0,6,110	0/0:3,0:3:9.03:0,9,165	0/0:3,0:3:9.03:0,9,156	1/1:0,7:7:15.05:214,15,0	0/0:4,0:4:9.03:0,9,151	1/1:0,4:4:12.04:172,12,0	0/0:6,0:6:18.06:0,18,330	0/0:4,0:4:12.04:0,12,220	0/0:6,0:6:18.06:0,18,330	0/0:8,0:7:24.08:0,24,425	0/0:2,0:2:6.02:0,6,110	0/0:5,0:5:15.03:0,15,244	0/0:8,0:8:21.07:0,21,385	0/0:5,0:5:12.04:0,12,220	0/1:13,0:13:3.53:4,0,621	0/0:12,0:12:33.11:0,33,595	0/0:4,0:4:12.04:0,12,220
chr10	85082800	.	AG	A	2301.83	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.197;DP=450;FS=1.545;HRun=6;HaplotypeScore=45.5173;InbreedingCoeff=0.9356;MQ=79.46;MQ0=0;MQRankSum=-1.456;QD=25.58;ReadPosRankSum=2.711;VQSLOD=3.6507;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:75.22:0,75,962	1/1:0,2:2:6.02:64,6,0	0/0:18,0:18:31.07:0,31,505	0/0:10,0:10:24:0,24,275	0/0:10,0:10:27.05:0,27,312	0/0:17,0:17:48.13:0,48,602	0/0:23,0:23:45.14:0,45,584	0/0:28,0:28:66.13:0,66,803	1/1:2,13:15:33.08:355,33,0	1/1:1,8:9:24.06:258,24,0	1/1:2,5:7:12.03:129,12,0	0/0:13,0:13:36.11:0,36,460	0/0:14,0:14:39.13:0,39,511	0/0:20,0:20:54.13:0,54,673	1/1:1,16:17:48.12:516,48,0	0/0:11,0:11:30.10:0,30,394	1/1:1,39:40:99:1161,108,0	0/0:30,0:30:84.25:0,84,1089	0/0:17,0:17:41.95:0,42,513	0/0:8,0:8:18.04:0,18,221	0/0:31,0:31:90.28:0,90,1169	0/0:9,0:9:24.06:0,24,299	0/0:6,0:6:12.04:0,12,157	0/0:29,0:29:75.23:0,75,971	0/0:5,0:5:12.04:0,12,158	0/0:13,0:13:30.10:0,30,394	0/0:17,0:17:48.14:0,48,615	0/0:2,0:2:6.02:0,6,79
chr10	85083899	.	G	GGT	433.73	PASS	AB=0.929;AC=8;AF=0.143;AN=56;BaseQRankSum=4.490;DP=599;FS=0.827;HRun=0;HaplotypeScore=118.8118;InbreedingCoeff=0.5972;MQ=73.05;MQ0=6;MQRankSum=-1.909;QD=4.93;ReadPosRankSum=0.500;VQSLOD=2.6339;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:60.20:0,60,800	1/1:5,0:5:4.25:29,4,0	0/0:31,0:16:33.06:0,33,384	0/0:32,0:25:53.73:0,54,627	0/0:13,0:13:20.86:0,21,262	0/0:18,0:18:51.16:0,51,669	0/0:29,0:29:56.63:0,57,690	0/0:24,0:24:54.11:0,54,675	0/0:20,0:19:9.39:0,9,67	1/1:20,0:19:5.30:50,5,0	0/1:13,0:13:10.83:60,0,11	0/0:24,0:24:66.13:0,66,824	0/0:21,0:21:42.12:0,42,546	0/0:26,0:26:60.16:0,60,753	1/1:21,5:25:10.44:125,10,0	0/0:11,0:11:16.14:0,16,68	0/1:20,4:24:14.86:304,0,15	0/0:24,0:24:38.12:0,38,403	0/0:21,0:19:23.07:0,23,454	0/0:24,0:23:33:0,33,424	0/0:34,0:31:43.59:0,44,779	0/0:19,0:19:42.13:0,42,546	0/0:19,0:19:42.05:0,42,509	0/0:33,0:33:81.23:0,81,1045	0/0:20,0:20:54.14:0,54,693	0/0:17,0:17:38.58:0,39,488	0/0:14,0:14:11.76:0,12,311	0/0:11,0:11:23.98:0,24,300
chr10	85083904	.	GTA	G	1462.40	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=3.153;DP=598;FS=1.921;HRun=0;HaplotypeScore=103.8252;InbreedingCoeff=0.7547;MQ=69.04;MQ0=7;MQRankSum=-0.683;QD=10.30;ReadPosRankSum=-2.040;VQSLOD=3.1940;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:41.77:0,42,734	1/1:5,0:5:8.99:75,9,0	0/0:28,0:13:33:0,33,318	0/0:29,0:23:4.74:0,5,401	0/0:10,0:10:9.74:0,10,186	0/0:20,0:20:26.52:0,27,650	0/0:31,0:31:56.52:0,57,468	0/0:22,0:22:37.94:0,38,568	0/1:19,0:18:11.85:244,0,12	1/1:22,0:21:24.82:392,25,0	1/1:12,1:13:9.44:136,9,0	0/0:23,0:23:39.09:0,39,757	0/0:18,0:18:37.38:0,37,515	0/0:24,0:24:38.82:0,39,702	1/1:27,0:26:36.27:267,36,0	1/1:1,9:10:18.04:250,18,0	1/1:27,0:27:15.51:271,16,0	0/0:26,0:26:41.77:0,42,347	0/0:20,0:18:32.20:0,32,359	0/0:23,0:22:12.08:0,12,269	0/0:37,0:34:43.51:0,44,486	0/0:22,0:21:34.68:0,35,547	0/0:18,0:18:28.34:0,28,609	0/0:34,1:35:88.76:0,89,1232	0/0:23,0:23:58.91:0,59,749	0/1:19,0:19:12.69:13,0,513	0/0:13,0:13:14.05:0,14,264	0/0:9,2:11:26.24:0,26,360
chr10	85083906	.	A	ATGTGTG	1232.43	PASS	AB=0.936;AC=23;AF=0.442;AN=52;BaseQRankSum=8.239;DP=612;FS=7.635;HRun=0;HaplotypeScore=161.3421;InbreedingCoeff=0.5599;MQ=65.40;MQ0=8;MQRankSum=-3.376;QD=3.85;ReadPosRankSum=-3.028;VQSLOD=1.5285;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:26:34.63:0,35,547	1/1:7,0:7:5.96:45,6,0	./.	./.	0/0:7,0:10:11.93:0,12,195	0/0:19,0:20:11.93:0,12,436	0/1:18,0:34:3:33,0,3	0/1:24,0:24:32.57:33,0,132	0/1:20,0:19:16.65:17,0,62	1/1:24,0:23:2.96:115,3,0	0/1:12,0:12:3.56:28,0,4	0/0:22,0:22:30.84:0,31,472	0/0:16,0:17:23.87:0,24,369	0/0:18,0:22:36.10:0,36,653	1/1:29,0:28:8.41:120,8,0	0/0:10,0:10:18.05:0,18,212	1/1:27,0:27:28.22:197,28,0	1/1:13,17:33:13.37:160,13,0	1/1:19,0:17:14.83:223,15,0	1/1:23,0:22:11.03:109,11,0	1/1:36,0:33:15.36:112,15,0	0/0:21,0:20:29.94:0,30,421	0/0:16,0:17:4.33:0,4,361	0/0:38,0:37:60.12:0,60,993	0/0:24,0:24:39.78:0,40,611	0/1:16,0:20:12.76:13,0,440	1/1:12,0:12:9.92:217,10,0	0/0:11,0:11:18.67:0,19,298
chr10	85083916	.	G	GTGTGTGTGTC	1154.98	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=2.124;DP=598;FS=3.286;HRun=0;HaplotypeScore=187.8203;InbreedingCoeff=0.4766;MQ=54.77;MQ0=11;MQRankSum=-4.191;QD=9.55;ReadPosRankSum=1.048;VQSLOD=2.5060;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:53.54:0,54,1010	0/0:9,0:9:9.50:0,9,91	0/0:18,0:3:6.01:0,6,59	0/0:23,0:14:11.98:0,12,119	0/0:9,0:9:17.96:0,18,365	0/0:24,0:24:50:0,50,848	0/0:34,0:34:28.24:0,28,242	0/0:20,0:20:37.63:0,38,357	0/0:18,0:17:14.10:0,14,147	0/0:21,0:19:14.70:0,15,115	0/0:12,0:12:2.39:0,2,79	0/0:19,0:19:47.98:0,48,874	0/0:15,0:15:29.65:0,30,587	0/0:21,0:20:48.01:0,48,1015	0/0:24,0:23:0.55:0,1,96	0/0:10,0:10:18.06:0,18,432	0/0:28,0:28:14.89:0,15,330	0/1:34,0:34:46.21:46,0,164	1/1:16,0:14:17.89:281,18,0	1/1:18,4:22:0.32:267,0,0	0/1:40,0:36:48.99:349,0,49	0/0:26,0:25:43.79:0,44,706	0/0:17,0:17:39.92:0,40,691	0/0:39,0:38:92.06:0,92,1699	0/0:23,0:23:52.08:0,52,1061	0/0:22,0:22:45.65:0,46,721	1/1:5,2:8:12.91:350,13,0	0/0:17,0:17:40.35:0,40,627
chr10	85083924	.	G	GTC	1482.34	PASS	AB=0.952;AC=13;AF=0.232;AN=56;BaseQRankSum=4.451;DP=568;FS=3.501;HRun=0;HaplotypeScore=97.7610;InbreedingCoeff=0.3462;MQ=52.64;MQ0=15;MQRankSum=-0.386;QD=8.10;ReadPosRankSum=-0.517;VQSLOD=3.0642;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:56.67:0,57,647	0/1:10,0:10:1.43:101,0,1	0/0:21,0:2:6.01:0,6,59	0/0:18,0:7:11.95:0,12,103	0/0:10,0:10:17.79:0,18,206	0/0:21,0:21:50.06:0,50,552	0/0:30,0:30:41.10:0,41,334	0/0:22,0:21:53.05:0,53,509	0/1:11,0:10:5.98:6,0,158	0/1:19,0:17:99:107,0,126	0/1:10,0:10:30.30:57,0,30	0/0:18,0:18:48.07:0,48,591	0/0:11,0:11:30.04:0,30,384	0/0:19,0:18:44.03:0,44,548	0/1:23,0:22:26.35:162,0,26	0/0:10,0:10:18.03:0,18,183	0/1:29,0:29:85.45:282,0,85	0/0:35,0:35:20.48:0,20,242	0/1:8,8:14:16.41:171,0,16	1/1:23,0:22:32.68:270,33,0	1/1:36,0:32:22.97:378,23,0	0/0:23,0:22:44.65:0,45,552	0/0:17,0:17:42.03:0,42,488	0/0:40,0:39:96.05:0,96,1190	0/0:24,0:24:63.09:0,63,787	0/0:22,0:21:57.78:0,58,624	1/1:6,0:6:14.20:117,14,0	0/0:17,0:17:40.78:0,41,424
chr10	85085973	.	AC	A	2252.01	PASS	AB=0.849;AC=21;AF=0.375;AN=56;BaseQRankSum=2.795;DP=404;FS=8.176;HRun=10;HaplotypeScore=52.0564;InbreedingCoeff=0.6617;MQ=74.33;MQ0=1;MQRankSum=0.456;QD=11.09;ReadPosRankSum=2.693;VQSLOD=2.1613;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:41.94:0,42,421	0/0:0,0:2:2.84:0,3,14	0/1:17,0:16:28.26:28,0,107	0/0:12,0:9:10.62:0,11,104	0/0:5,0:5:9.02:0,9,99	0/0:19,0:19:29.18:0,29,307	1/1:9,15:24:38.98:338,39,0	0/1:14,1:15:14.02:14,0,88	0/0:2,0:11:14.33:0,14,77	0/0:5,0:5:9:0,9,78	0/0:2,0:5:5.72:0,6,29	1/1:9,12:22:5.96:214,6,0	1/1:6,12:18:38.98:337,39,0	1/1:8,15:24:43.99:368,44,0	0/0:3,0:19:17.26:0,17,110	0/0:11,0:12:15.10:0,15,251	0/0:30,2:32:38.16:0,38,869	1/1:3,15:18:11.81:331,12,0	0/1:5,9:14:3.22:199,0,3	1/1:5,2:7:5.88:43,6,0	1/1:9,12:22:35.02:292,35,0	1/1:2,5:7:11.99:104,12,0	0/0:5,0:5:6.02:0,6,66	0/0:18,1:18:24.91:0,25,470	0/0:11,0:11:18.03:0,18,185	0/0:16,0:16:27.04:0,27,269	1/1:7,8:14:20.97:182,21,0	0/0:3,0:3:5.99:0,6,50
chr10	85086391	.	T	TAA	3617.14	PASS	AB=0.941;AC=15;AF=0.268;AN=56;BaseQRankSum=-6.605;DP=503;FS=12.478;HRun=10;HaplotypeScore=69.9037;InbreedingCoeff=0.9180;MQ=72.80;MQ0=1;MQRankSum=0.597;QD=23.49;ReadPosRankSum=-3.495;VQSLOD=0.9349;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,31:47:51.35:1050,51,0	0/0:6,0:6:11.88:0,12,107	0/1:15,0:12:3.10:3,0,99	0/0:6,0:6:11.70:0,12,88	0/0:17,0:17:48.09:0,48,488	0/0:20,0:20:45.08:0,45,457	0/0:22,0:22:60.11:0,60,610	1/1:3,13:19:48.86:641,49,0	0/0:17,0:17:39.06:0,39,397	0/0:12,0:13:32.81:0,33,317	0/0:18,0:18:45.07:0,45,458	0/0:17,0:17:42.06:0,42,427	0/0:18,0:17:42.07:0,42,420	0/0:15,0:15:39.06:0,39,397	0/0:9,0:10:23.78:0,24,225	1/1:2,14:16:33.11:493,33,0	0/0:47,0:48:99:0,123,1211	0/0:32,0:32:81.17:0,81,824	1/1:3,13:18:45.11:598,45,0	1/1:5,8:16:26.49:310,26,0	1/1:1,14:14:24.08:358,24,0	0/0:9,0:9:21.03:0,21,214	0/0:6,0:8:14.50:0,14,180	0/0:28,0:29:77.84:0,78,749	0/0:16,0:17:44.83:0,45,439	0/0:17,0:18:41.81:0,42,408	1/1:1,5:7:13.85:165,14,0	0/0:9,0:9:24.04:0,24,244
chr10	85086433	.	T	TG	1599.98	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.175;DP=445;FS=2.045;HRun=6;HaplotypeScore=45.6729;InbreedingCoeff=0.9368;MQ=75.67;MQ0=0;MQRankSum=-3.847;QD=29.63;ReadPosRankSum=-1.057;VQSLOD=3.6748;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:45.12:0,45,506	0/0:4,0:4:9.03:0,9,102	0/0:12,0:10:27.07:0,27,296	0/0:15,0:15:39.09:0,39,432	0/0:16,0:16:48.14:0,48,541	0/0:13,0:13:39.11:0,39,442	1/1:3,21:24:57.19:779,57,0	0/0:22,0:22:60.17:0,60,679	0/0:10,0:10:30.09:0,30,339	0/0:19,0:19:57.16:0,57,644	0/0:15,0:15:45.13:0,45,505	0/0:15,0:15:36.10:0,36,407	0/0:12,0:11:33.08:0,33,365	0/0:18,0:18:51.14:0,51,576	0/0:15,0:15:45.12:0,45,503	0/0:8,0:8:21.05:0,21,238	0/0:31,0:31:84.22:0,84,943	1/1:2,28:30:69.23:943,69,0	0/0:15,0:15:42.11:0,42,467	0/0:8,0:8:23.54:0,24,237	0/0:18,0:18:39.11:0,39,442	0/0:15,0:15:42.12:0,42,473	0/0:9,0:9:21.06:0,21,237	0/0:23,0:23:69.19:0,69,777	0/0:13,0:13:36.10:0,36,403	0/0:22,0:22:62.84:0,63,683	0/0:5,0:5:9.03:0,9,102	0/0:10,0:10:30.09:0,30,340
chr10	85087496	.	C	CT	897.35	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.949;DP=408;FS=0.000;HRun=9;HaplotypeScore=41.1853;InbreedingCoeff=0.7655;MQ=72.25;MQ0=0;MQRankSum=-0.941;QD=20.39;ReadPosRankSum=-1.943;VQSLOD=2.9661;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:48.13:531,48,0	0/0:8,0:8:14.99:0,15,130	0/0:10,0:11:2.93:0,3,131	0/0:7,0:6:5.02:0,5,67	0/0:23,0:23:56.98:0,57,495	0/0:16,0:16:44.99:0,45,391	0/0:10,0:10:29.98:0,30,256	1/1:8,17:25:48.05:487,48,0	0/0:11,0:11:26.98:0,27,234	0/0:19,0:19:47.94:0,48,410	0/0:23,0:24:62:0,62,523	0/0:16,0:16:41.99:0,42,365	0/0:16,0:16:41.98:0,42,365	0/0:9,0:9:17.98:0,18,156	0/0:13,0:13:32.96:0,33,283	0/0:15,0:15:35.98:0,36,312	0/0:22,0:22:62.99:0,63,547	0/0:19,0:19:50.99:0,51,443	0/0:16,0:16:44.99:0,45,391	0/0:18,0:18:53.99:0,54,468	0/0:4,0:4:8.99:0,9,78	0/0:1,0:1:3:0,3,26	0/0:14,0:14:38.96:0,39,331	0/0:10,0:10:23.97:0,24,203	0/0:16,0:16:41.99:0,42,365	0/0:22,0:22:50.95:0,51,443	0/0:16,0:16:47.99:0,48,417	0/0:8,0:8:20.97:0,21,177
chr10	85087648	.	TGCCAAGTCTCTACG	T	1905.89	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.721;DP=607;FS=5.093;HRun=0;HaplotypeScore=226.1681;InbreedingCoeff=0.9663;MQ=87.57;MQ0=0;MQRankSum=-6.819;QD=76.24;ReadPosRankSum=2.570;VQSLOD=3.2737;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,6818	0/0:9,0:9:24.08:0,24,1667	0/0:20,0:20:51.16:0,51,2314	0/0:24,0:24:60.18:0,60,3258	0/0:32,0:32:93.32:0,93,5976	0/0:16,0:16:45.15:0,45,2999	0/0:33,0:33:93.32:0,93,5786	0/0:35,0:35:84.29:0,84,5374	0/0:19,0:19:48.16:0,48,3043	0/0:21,0:21:57.20:0,57,3467	0/0:18,0:18:48.16:0,48,3195	0/0:27,0:27:81.24:0,81,5279	0/0:13,0:13:39.13:0,39,2574	0/0:22,0:22:63.22:0,63,3491	0/0:14,0:14:42.14:0,42,2768	1/1:4,21:25:48.16:2001,48,0	0/0:35,0:35:99:0,99,6479	0/0:23,0:23:63.22:0,63,4365	0/0:16,0:16:45.15:0,45,2798	0/0:28,0:28:69.22:0,69,4285	0/0:30,0:30:84.29:0,84,5631	0/0:11,0:11:24.08:0,24,1556	0/0:17,0:17:45.15:0,45,2784	0/0:22,0:22:60.19:0,60,3987	0/0:15,0:15:45.15:0,45,2908	0/0:17,0:17:45.15:0,45,2842	0/0:23,0:23:63.22:0,63,3780	0/0:4,0:4:12.04:0,12,617
chr10	85088707	.	TC	T	5708.49	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=12.485;DP=523;FS=1.121;HRun=7;HaplotypeScore=63.1292;InbreedingCoeff=0.9772;MQ=83.67;MQ0=0;MQRankSum=-2.445;QD=25.71;ReadPosRankSum=3.410;VQSLOD=5.4578;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,130,1622	1/1:1,9:10:27.06:275,27,0	0/0:20,0:19:42.38:0,42,466	0/0:21,0:21:43.84:0,44,491	0/0:23,0:23:69.22:0,69,867	0/0:18,0:18:51.15:0,51,629	0/0:22,0:22:60.19:0,60,753	0/0:20,0:20:48.15:0,48,604	1/1:0,12:13:35.11:343,35,0	1/1:1,16:17:48.09:482,48,0	1/1:3,13:15:39.09:397,39,0	0/0:15,0:15:42.13:0,42,528	0/0:18,0:18:51.16:0,51,637	0/0:5,0:5:12.04:0,12,151	1/1:1,24:25:66.15:673,66,0	1/1:2,19:21:48.11:490,48,0	1/1:3,23:26:57.13:582,57,0	0/0:17,0:17:45.12:0,45,551	1/1:2,15:17:48.09:482,48,0	1/1:2,12:14:33.07:336,33,0	1/1:1,38:39:99:1102,108,0	0/0:13,0:13:36.12:0,36,453	0/0:17,0:17:48.13:0,48,578	0/0:23,0:23:69.22:0,69,868	0/0:7,0:7:21.07:0,21,264	0/0:11,1:12:5.48:0,5,372	1/1:4,20:24:54.11:546,54,0	0/0:6,0:6:18.06:0,18,227
chr10	85089600	.	GCTTCTCCTTCTC	G	5172.91	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=9.062;DP=570;FS=3.352;HRun=0;HaplotypeScore=216.0584;InbreedingCoeff=0.5637;MQ=59.26;MQ0=9;MQRankSum=-9.646;QD=18.02;ReadPosRankSum=1.386;VQSLOD=3.9137;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:36:99:408,0,476	1/1:11,0:11:7.42:215,7,0	0/0:37,0:18:11.06:0,11,141	0/0:34,0:23:14.98:0,15,297	0/0:20,0:20:48.16:0,48,2082	0/0:24,0:24:42.14:0,42,2336	1/1:9,12:21:3.01:96,3,0	0/1:34,0:33:99:304,0,159	1/1:17,0:17:33.08:579,33,0	1/1:15,0:15:30.09:464,30,0	1/1:22,0:22:29.87:415,30,0	0/0:18,0:18:33.11:0,33,1710	0/0:18,0:18:24.08:0,24,1227	0/0:15,0:15:39.13:0,39,1935	1/1:20,0:20:34.81:712,35,0	1/1:14,0:14:24.05:342,24,0	1/1:18,0:18:27.07:443,27,0	1/1:2,2:4:3.01:104,3,0	0/1:21,0:20:99:258,0,150	0/1:15,0:15:78.82:333,0,79	1/1:20,0:20:11.99:164,12,0	0/0:16,0:16:42.14:0,42,1875	0/0:20,0:20:39.12:0,39,1923	0/0:15,0:15:42.13:0,42,1849	0/0:19,0:19:39.12:0,39,1785	0/0:22,0:22:33.11:0,33,1691	0/1:17,0:17:99:335,0,106	0/0:25,0:25:54.17:0,54,2486
chr10	85089629	.	TC	T	2221.33	PASS	AB=0.720;AC=17;AF=0.304;AN=56;BaseQRankSum=13.545;DP=569;FS=3.914;HRun=2;HaplotypeScore=126.8550;InbreedingCoeff=0.2353;MQ=47.46;MQ0=13;MQRankSum=-6.687;QD=9.07;ReadPosRankSum=1.066;VQSLOD=1.4661;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,24:39:50.39:717,50,0	0/1:4,5:9:22.53:23,0,152	0/0:31,0:10:23.99:0,24,275	0/0:34,1:12:23.89:0,24,336	0/0:24,0:24:69.22:0,69,1007	0/0:22,0:22:66.22:0,66,989	0/0:26,0:26:43.70:0,44,632	0/1:21,10:30:99:167,0,506	0/1:12,8:20:64.04:64,0,162	0/1:7,6:13:87.98:170,0,88	0/1:9,6:15:62.80:87,0,63	0/0:21,0:21:60.19:0,60,879	0/0:16,0:16:48.16:0,48,719	0/0:19,0:19:54.18:0,54,803	1/1:5,14:19:15.97:203,16,0	0/1:5,4:9:33.18:113,0,33	0/1:11,8:18:99:139,0,168	0/0:9,0:9:15.39:0,15,237	0/1:12,6:17:99:104,0,257	1/1:1,14:15:34.16:239,34,0	0/1:14,4:18:51.01:51,0,120	0/0:19,0:19:57.19:0,57,854	0/0:18,0:18:51.16:0,51,745	0/0:24,0:24:66.21:0,66,969	0/0:18,0:18:54.17:0,54,789	0/0:19,0:19:51.17:0,51,765	1/1:2,16:18:44.19:330,44,0	0/0:23,0:23:66.20:0,66,949
chr10	85089632	.	TTC	T	2457.23	PASS	AB=0.694;AC=16;AF=0.286;AN=56;BaseQRankSum=13.832;DP=562;FS=1.226;HRun=0;HaplotypeScore=133.9287;InbreedingCoeff=0.1057;MQ=47.06;MQ0=10;MQRankSum=-7.862;QD=10.37;ReadPosRankSum=3.007;VQSLOD=3.6904;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,24:37:41.43:798,41,0	0/1:4,5:9:37.72:38,0,143	0/0:26,0:11:8.27:0,8,338	0/0:35,1:11:17.89:0,18,327	0/0:24,0:24:66.21:0,66,1180	0/0:23,0:23:66.23:0,66,1227	0/0:32,0:32:52.82:0,53,929	0/1:20,10:29:99:186,0,597	0/1:11,8:19:57.30:57,0,247	0/1:6,6:12:91.20:145,0,91	0/1:8,6:14:38.36:38,0,93	0/0:20,0:20:60.21:0,60,1112	0/0:18,0:18:54.17:0,54,957	0/0:20,0:20:57.20:0,57,1048	0/1:4,14:18:38.71:243,0,39	0/1:4,4:8:41.22:41,0,79	0/1:10,8:17:99:142,0,158	0/0:10,0:10:14.79:0,15,319	0/1:11,6:15:99:128,0,212	1/1:2,14:16:42.17:350,42,0	0/1:14,4:18:71.17:71,0,77	0/0:20,0:20:60.18:0,60,1072	0/0:16,0:16:48.16:0,48,895	0/0:23,0:23:57.20:0,57,1062	0/0:18,0:18:51.17:0,51,930	0/0:17,0:17:48.16:0,48,895	1/1:3,16:19:10.61:397,11,0	0/0:21,0:21:63.22:0,63,1144
chr10	85089634	.	C	CTCT	3723.82	PASS	AB=0.990;AC=17;AF=0.304;AN=56;BaseQRankSum=12.850;DP=576;FS=0.365;HRun=0;HaplotypeScore=147.9620;InbreedingCoeff=0.2858;MQ=45.35;MQ0=11;MQRankSum=-9.031;QD=14.84;ReadPosRankSum=-1.516;VQSLOD=3.2588;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,10:38:38.05:503,38,0	0/1:9,0:9:15.43:111,0,15	0/0:29,0:12:23.07:0,23,304	0/0:34,0:10:20.87:0,21,298	0/0:23,0:23:60.21:0,60,1023	0/0:23,0:23:66.06:0,66,1080	0/0:32,0:32:59.82:0,60,836	0/1:35,0:34:94.43:977,0,94	0/1:19,0:19:72.80:175,0,73	1/1:12,0:12:25.24:195,25,0	0/1:14,0:14:55.69:56,0,56	0/0:21,0:21:63.19:0,63,1022	0/0:18,0:18:51.17:0,51,853	0/0:19,0:19:57.18:0,57,926	0/1:18,0:18:15.77:75,0,16	0/1:7,0:7:23.72:24,0,64	0/1:18,0:17:26.06:115,0,26	0/0:11,0:11:22.60:0,23,311	0/1:20,0:17:86.54:177,0,87	1/1:17,0:17:30.81:484,31,0	0/1:18,2:20:2.06:143,0,2	0/0:20,0:20:57.18:0,57,917	0/0:16,0:16:48.16:0,48,818	0/0:21,0:21:57.20:0,57,969	0/0:19,0:19:54.14:0,54,840	0/0:17,0:17:48.16:0,48,819	1/1:22,0:22:34.27:689,34,0	0/0:22,0:22:57.19:0,57,959
chr10	85089649	.	CTCT	C	1742.96	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=14.184;DP=601;FS=4.076;HRun=0;HaplotypeScore=145.9853;InbreedingCoeff=0.6353;MQ=46.89;MQ0=12;MQRankSum=-12.046;QD=9.27;ReadPosRankSum=1.780;VQSLOD=2.7601;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:42:91.17:0,91,1585	1/1:6,5:11:4.89:146,5,0	0/0:24,0:11:24.08:0,24,545	0/0:29,0:7:18.06:0,18,398	0/0:18,0:18:48.15:0,48,1058	0/0:25,0:25:75.19:0,75,1600	0/0:35,0:35:64.02:0,64,1524	0/0:41,0:39:99:0,108,1376	1/1:16,7:23:39.01:282,39,0	1/1:10,3:13:25.93:238,26,0	1/1:5,5:10:14.80:85,15,0	0/0:24,0:24:69.21:0,69,1455	0/0:21,0:21:63.19:0,63,1341	0/0:20,0:20:60.21:0,60,1307	1/1:8,11:19:42.44:497,42,0	1/1:8,4:12:9.48:146,9,0	1/1:13,6:19:16.38:311,16,0	0/0:12,0:12:33.11:0,33,701	0/1:16,0:14:18.05:18,0,152	0/1:20,0:20:49.96:62,0,50	0/1:23,0:23:21.59:22,0,284	0/0:20,0:19:57.17:0,57,1175	0/0:16,0:16:48.12:0,48,1031	0/0:23,0:23:66.17:0,66,1420	0/0:18,0:18:51.16:0,51,1073	0/0:22,0:22:66.21:0,66,1347	0/1:22,0:22:87.48:134,0,87	0/0:20,0:19:57.18:0,57,1227
chr10	85089652	.	T	TTCCTCC	5795.25	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=10.733;DP=632;FS=18.610;HRun=0;HaplotypeScore=170.6534;InbreedingCoeff=0.5981;MQ=48.16;MQ0=11;MQRankSum=-11.021;QD=22.82;ReadPosRankSum=0.242;VQSLOD=3.2218;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:42:22.39:0,22,1299	1/1:5,6:11:24.87:542,25,0	0/0:26,0:12:27.04:0,27,480	0/0:33,0:8:21:0,21,361	0/0:18,0:18:48.16:0,48,1027	0/0:26,0:26:78.24:0,78,1561	0/0:33,0:33:74.32:0,74,1402	0/1:40,0:39:99:146,0,552	1/1:9,13:24:46.80:984,47,0	1/1:5,10:20:57.02:1074,57,0	1/1:6,4:15:20.96:385,21,0	0/0:24,0:24:66.19:0,66,1380	0/0:21,0:21:60.16:0,60,1198	0/0:20,0:20:54.16:0,54,1077	1/1:13,9:24:42:704,42,0	1/1:5,9:16:17.94:271,18,0	1/1:8,13:23:44.30:849,44,0	0/0:12,0:12:33.11:0,33,683	0/1:17,0:15:99:199,0,119	0/1:17,0:17:58.20:245,0,58	0/1:24,0:24:82.98:83,0,181	0/0:20,0:19:57.11:0,57,1007	0/0:16,0:16:42.14:0,42,913	0/0:25,0:25:72.13:0,72,1401	0/0:18,0:18:48.08:0,48,925	0/0:22,0:22:57.17:0,57,1172	0/1:23,0:23:99:313,0,168	0/0:20,0:19:54.18:0,54,1044
chr10	85090277	.	G	GA	961	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=1.947;DP=246;FS=13.676;HRun=9;HaplotypeScore=36.3292;InbreedingCoeff=0.6006;MQ=88.95;MQ0=3;MQRankSum=-2.582;QD=8.21;ReadPosRankSum=2.170;VQSLOD=0.2421;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:1.78:71,2,0	1/1:3,0:3:5.75:29,6,0	0/0:30,0:23:37.28:0,37,298	0/0:23,0:15:25.27:0,25,192	0/0:14,0:14:28.25:0,28,257	0/0:5,0:5:9:0,9,78	1/1:4,10:14:7.04:306,7,0	1/1:11,0:9:8.43:35,8,0	1/1:5,0:5:8.63:44,9,0	1/1:15,0:15:25.25:119,25,0	0/1:4,0:4:5.90:6,0,37	0/0:6,0:6:8.99:0,9,78	0/0:6,0:6:15:0,15,130	0/0:10,0:10:23.99:0,24,208	1/1:2,0:2:1.71:13,2,0	1/1:4,0:4:5.75:29,6,0	1/1:11,0:11:20.18:105,20,0	1/1:0,7:7:21.06:232,21,0	0/1:12,0:11:8.91:53,0,9	0/1:4,0:4:10.25:22,0,10	1/1:8,0:8:11.52:60,12,0	0/0:9,0:9:17.99:0,18,156	0/0:4,0:4:8.98:0,9,75	0/0:6,0:6:14.97:0,15,125	0/0:2,0:2:6:0,6,52	0/0:9,0:9:10.07:0,10,169	1/1:6,0:6:5.78:30,6,0	0/0:4,0:4:2.69:0,3,20
chr10	85090285	.	A	AC	369.80	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=0.879;DP=203;FS=3.331;HRun=0;HaplotypeScore=36.7573;InbreedingCoeff=0.5114;MQ=89.67;MQ0=2;MQRankSum=-0.562;QD=8.22;ReadPosRankSum=0.775;VQSLOD=3.2382;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:11:21.95:275,22,0	0/0:3,0:3:5.09:0,5,19	0/0:30,0:20:51.03:0,51,605	0/0:22,0:13:25.87:0,26,338	0/0:11,0:11:32.98:0,33,433	0/0:3,0:3:9.03:0,9,125	0/1:12,0:12:32.46:32,0,36	1/1:2,4:5:14.95:157,15,0	0/0:4,0:4:7.59:0,8,29	0/0:10,0:10:28.56:0,29,155	0/0:3,0:3:8.61:0,9,78	0/0:3,0:3:9.03:0,9,125	0/0:5,0:5:15.05:0,15,209	0/0:8,0:8:24.08:0,24,335	0/0:2,0:2:5.59:0,6,35	0/0:2,0:2:5.19:0,5,20	0/0:10,0:10:17.52:0,18,66	1/1:7,0:7:14.44:44,14,0	0/1:9,0:8:3.20:3,0,83	0/0:3,0:3:7.06:0,7,45	0/0:5,0:5:8.30:0,8,30	0/0:6,0:6:18.06:0,18,251	0/0:3,0:3:9.03:0,9,117	0/0:5,0:5:15.05:0,15,200	0/0:2,0:2:6.02:0,6,84	0/0:9,0:9:26.87:0,27,333	0/0:5,0:5:4.97:0,5,18	0/0:4,0:4:8.99:0,9,81
chr10	85090286	.	A	AC	1934.69	PASS	AB=0.950;AC=30;AF=0.556;AN=54;BaseQRankSum=-2.820;DP=194;FS=19.547;HRun=1;HaplotypeScore=27.1760;InbreedingCoeff=0.6775;MQ=91.02;MQ0=2;MQRankSum=-2.567;QD=20.15;ReadPosRankSum=0.857;VQSLOD=2.1193;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:21.95:276,22,0	1/1:0,3:3:6.02:83,6,0	0/0:29,0:20:47.78:0,48,502	0/0:22,0:13:31.63:0,32,302	0/0:10,0:10:30.10:0,30,385	0/0:3,0:3:9.03:0,9,116	0/1:12,0:12:26.89:51,0,27	1/1:4,0:4:11.99:136,12,0	1/1:0,4:4:9.03:125,9,0	1/1:0,10:10:30.09:402,30,0	1/1:2,1:3:3.01:42,3,0	0/0:3,0:3:9.03:0,9,116	0/0:5,0:5:15.05:0,15,192	0/0:8,0:8:24.06:0,24,294	1/1:1,1:2:6.01:67,6,0	1/1:0,2:2:6.02:83,6,0	1/1:0,10:10:21.07:292,21,0	1/1:7,0:7:16.55:57,17,0	1/1:2,4:7:15.02:185,15,0	1/1:0,3:3:6.02:77,6,0	1/1:0,5:5:12.04:159,12,0	0/0:6,0:6:18.06:0,18,231	0/0:3,0:3:6.02:0,6,77	0/0:5,0:5:12.04:0,12,154	0/0:2,0:2:6.02:0,6,77	0/1:8,1:9:14.68:15,0,258	1/1:0,5:5:6.02:83,6,0	./.
chr10	85091438	.	C	CA	724.48	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.905;DP=635;FS=9.634;HRun=10;HaplotypeScore=74.1906;InbreedingCoeff=0.9763;MQ=67.91;MQ0=0;MQRankSum=-0.217;QD=20.70;ReadPosRankSum=-0.006;VQSLOD=4.1610;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:74.83:0,75,615	0/0:11,0:11:23.86:0,24,192	0/0:14,0:15:17.53:0,18,106	0/0:7,0:7:11.97:0,12,96	0/0:32,2:36:25.24:0,25,598	0/0:27,0:27:80.90:0,81,664	1/1:2,18:21:50.96:526,51,0	0/0:27,2:29:25.08:0,25,411	0/0:26,0:26:74.89:0,75,615	0/0:30,0:30:77.84:0,78,633	0/0:22,0:22:56.88:0,57,463	0/0:21,0:21:50.93:0,51,419	0/0:20,0:20:44.91:0,45,369	0/0:15,0:15:35.94:0,36,295	0/0:29,0:29:71.73:0,72,573	0/0:20,0:20:56.90:0,57,464	0/0:17,0:17:38.90:0,39,320	1/1:1,13:14:30.08:320,30,0	0/0:31,0:32:84.94:0,85,672	0/0:30,1:31:57.91:0,58,682	0/0:14,0:14:32.93:0,33,267	0/0:37,0:38:94.87:0,95,766	0/0:13,0:13:35.93:0,36,292	0/0:17,0:17:41.95:0,42,345	0/0:19,0:19:53.89:0,54,438	0/0:30,0:31:73.92:0,74,596	0/0:36,1:37:44.63:0,45,610	0/0:14,0:14:38.95:0,39,320
chr10	85092174	.	GC	G	1681.90	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.436;DP=624;FS=5.714;HRun=1;HaplotypeScore=61.7867;InbreedingCoeff=0.9940;MQ=88.75;MQ0=0;MQRankSum=-1.791;QD=35.79;ReadPosRankSum=0.661;VQSLOD=3.6419;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.32:0,93,1486	0/0:8,0:8:24.08:0,24,383	0/0:27,0:27:81.25:0,81,1209	0/0:18,0:18:51.09:0,51,739	0/0:20,0:20:54.16:0,54,837	0/0:18,0:18:54.14:0,54,792	1/1:0,26:26:72.24:1006,72,0	0/0:26,0:26:78.26:0,78,1226	0/0:23,0:23:69.24:0,69,1098	0/0:21,0:21:63.21:0,63,1003	0/0:10,0:10:27.08:0,27,409	0/0:20,0:20:60.20:0,60,959	0/0:23,0:23:69.24:0,69,1103	0/0:28,0:28:84.29:0,84,1341	0/0:29,0:29:87.30:0,87,1383	0/0:27,0:27:81.28:0,81,1295	0/0:42,0:42:99:0,120,1913	1/1:0,21:21:57.19:797,57,0	0/0:26,0:26:78.27:0,78,1246	0/0:17,0:17:51.17:0,51,812	0/0:35,0:35:99:0,105,1652	0/0:11,0:11:30.10:0,30,478	0/0:19,0:19:48.15:0,48,738	0/0:31,0:31:93.30:0,93,1459	0/0:19,0:19:57.19:0,57,911	0/0:17,0:17:48.15:0,48,726	0/0:25,0:25:72.25:0,72,1151	0/0:6,0:6:18.06:0,18,287
chr10	85092387	.	ACAT	A	5477.89	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=1.182;DP=759;FS=21.439;HRun=0;HaplotypeScore=130.9333;InbreedingCoeff=0.9853;MQ=67.90;MQ0=4;MQRankSum=4.136;QD=22.82;ReadPosRankSum=3.234;VQSLOD=2.9503;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:36:48.16:0,48,648	1/1:11,6:17:18.06:242,18,0	0/0:36,0:23:21.07:0,21,322	0/0:28,0:18:9.03:0,9,144	0/0:20,0:20:45.15:0,45,866	0/0:25,0:25:48.16:0,48,934	0/0:19,0:29:42.14:0,42,547	0/0:35,0:43:48.16:0,48,807	1/1:12,12:25:41.93:538,42,0	1/1:8,13:22:39.09:505,39,0	1/1:3,7:10:21.07:282,21,0	1/1:10,21:31:60.20:807,60,0	1/1:11,16:27:51.17:686,51,0	1/1:16,12:28:36.12:484,36,0	1/1:8,18:26:48.16:646,48,0	0/0:39,1:40:34.89:0,35,1347	1/1:11,15:27:39.13:525,39,0	0/0:17,0:17:18.02:0,18,242	0/0:12,0:17:21.06:0,21,281	0/0:10,0:29:54.16:0,54,692	0/0:23,0:56:90.28:0,90,1187	1/1:7,20:27:57.19:762,57,0	0/0:23,0:23:39.13:0,39,752	0/0:34,0:34:54.14:0,54,1012	0/0:10,0:10:21.07:0,21,408	0/0:28,0:28:51.17:0,51,961	0/0:16,0:31:54.12:0,54,697	0/0:15,0:15:18.06:0,18,347
chr10	85092440	.	CTG	C	2448.42	PASS	AB=0.934;AC=35;AF=0.673;AN=52;BaseQRankSum=7.337;DP=814;FS=10.073;HRun=0;HaplotypeScore=151.6944;InbreedingCoeff=-0.0506;MQ=53.69;MQ0=20;MQRankSum=-2.170;QD=3.63;ReadPosRankSum=0.684;VQSLOD=2.3700;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:35:14.57:70,15,0	1/1:13,2:15:29.59:274,30,0	./.	./.	0/1:17,1:18:6.23:6,0,263	0/1:28,2:30:1.72:2,0,317	0/1:22,0:34:13.67:36,0,14	1/1:23,0:21:2.04:6,2,0	0/1:24,2:25:21.23:21,0,468	0/1:22,0:21:15.27:151,0,15	0/1:16,4:21:11.99:259,0,12	0/1:33,3:36:72.48:72,0,214	0/0:25,0:24:29.98:0,30,354	0/1:29,0:29:15.15:15,0,464	1/1:28,10:39:54.07:536,54,0	1/1:18,2:45:50.35:277,50,0	1/1:23,11:32:29.44:471,29,0	1/1:6,0:13:5.68:28,6,0	1/1:20,0:24:19:91,19,0	1/1:17,0:20:9.84:45,10,0	1/1:51,0:56:12.06:126,12,0	0/1:28,0:28:4.78:5,0,258	0/1:19,0:19:35.14:35,0,201	0/1:36,4:40:6.27:6,0,701	0/0:29,0:30:57.19:0,57,815	0/1:28,1:28:17.34:17,0,137	1/1:19,0:19:6.15:29,6,0	0/1:13,0:13:30.94:31,0,90
chr10	85094375	.	T	TA	2020.04	PASS	AB=0.753;AC=24;AF=0.429;AN=56;BaseQRankSum=0.539;DP=498;FS=11.707;HRun=12;HaplotypeScore=52.4474;InbreedingCoeff=0.6316;MQ=62.40;MQ0=32;MQRankSum=-0.236;QD=8.28;ReadPosRankSum=-2.890;VQSLOD=0.3568;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,15:22:47.46:432,47,0	1/1:0,0:6:14.24:72,14,0	0/0:49,0:7:6.91:0,7,59	0/1:44,0:12:7.72:8,0,27	0/0:19,1:22:27.65:0,28,338	0/0:19,0:18:50.39:0,50,360	0/0:14,0:14:31.86:0,32,224	0/1:13,18:26:36.86:291,0,37	1/1:4,1:11:4.88:27,5,0	1/1:4,0:14:28.67:155,29,0	1/1:7,1:14:1.44:95,1,0	0/0:6,2:7:8.95:0,9,66	0/0:11,0:11:17.87:0,18,131	0/0:13,0:13:35.75:0,36,260	1/1:5,0:13:20.05:114,20,0	1/1:3,6:9:21.03:204,21,0	1/1:3,2:17:9.83:150,10,0	0/0:14,0:16:42.84:0,43,296	0/1:15,10:22:38.97:288,0,39	0/1:6,6:10:6.04:94,0,6	1/1:1,4:4:6.01:58,6,0	0/0:13,0:13:32.81:0,33,240	0/0:7,0:9:13.95:0,14,93	0/0:8,0:9:22.89:0,23,159	0/0:24,0:24:68.56:0,69,499	0/0:17,0:17:32.75:0,33,241	1/1:6,11:16:24.04:234,24,0	0/0:28,1:29:33.44:0,33,476
chr10	85096548	.	T	TG	6789.21	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-15.092;DP=713;FS=1.398;HRun=6;HaplotypeScore=72.9775;InbreedingCoeff=0.9996;MQ=88.72;MQ0=0;MQRankSum=-2.117;QD=32.02;ReadPosRankSum=1.147;VQSLOD=5.1808;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,35:40:99:1321,105,0	0/0:15,0:15:45.10:0,45,459	0/0:28,0:28:66.33:0,66,600	0/0:27,0:27:58.97:0,59,539	0/0:16,0:16:48.09:0,48,483	0/0:22,0:22:66.15:0,66,672	0/0:26,0:26:63.10:0,63,632	1/1:3,31:34:90.29:1131,90,0	0/0:27,0:27:72.16:0,72,733	0/0:21,0:21:48.09:0,48,484	0/0:19,0:19:42.04:0,42,413	0/0:28,0:28:75.17:0,75,765	0/0:21,0:21:60.13:0,60,612	0/0:27,0:27:81.18:0,81,826	0/0:23,0:23:66.15:0,66,673	1/1:1,24:25:66.21:830,66,0	0/0:35,0:35:93.19:0,93,941	0/0:23,0:23:57.12:0,57,581	1/1:4,17:21:51.16:641,51,0	1/1:1,24:25:72.23:905,72,0	1/1:6,31:37:90.29:1132,90,0	0/0:25,0:25:72.15:0,72,728	0/0:24,0:24:60.13:0,60,612	0/0:23,0:23:66.15:0,66,673	0/0:36,0:36:99:0,108,1102	0/0:25,0:25:69.15:0,69,704	1/1:3,27:30:66.21:828,66,0	0/0:10,0:10:24.05:0,24,245
chr10	85097678	.	T	TA	2742.57	PASS	AB=0.747;AC=15;AF=0.268;AN=56;BaseQRankSum=-10.102;DP=612;FS=6.341;HRun=11;HaplotypeScore=61.2665;InbreedingCoeff=0.7153;MQ=77.11;MQ0=2;MQRankSum=-0.003;QD=15.49;ReadPosRankSum=0.487;VQSLOD=4.1724;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:36:91.08:0,91,701	0/1:2,5:7:8.21:107,0,8	0/1:23,0:19:21.89:22,0,47	0/0:18,0:17:16.09:0,16,121	0/0:27,0:30:81.53:0,82,593	0/0:27,0:27:74.68:0,75,576	1/1:4,13:18:18.68:356,19,0	0/0:32,0:32:68.66:0,69,529	1/1:4,14:18:15.58:324,16,0	1/1:7,25:33:80.97:792,81,0	0/1:12,13:25:31.27:244,0,31	0/0:17,0:17:47.81:0,48,371	0/0:21,0:21:59.75:0,60,460	0/0:17,0:17:47.76:0,48,364	1/1:2,16:18:36.07:365,36,0	0/0:23,0:23:55.79:0,56,424	1/1:2,20:22:48.10:487,48,0	1/1:3,8:12:6.66:234,7,0	0/0:23,0:24:52.79:0,53,398	0/0:34,0:36:96.70:0,97,728	0/0:17,0:17:49.85:0,50,377	0/0:26,0:26:62.74:0,63,487	0/0:19,0:19:20.34:0,20,280	0/0:13,0:13:35.86:0,36,279	0/0:23,0:24:22.97:0,23,343	0/0:25,1:27:28.36:0,28,393	0/0:16,0:15:41.92:0,42,344	0/0:12,0:12:32.87:0,33,255
chr10	85098532	.	TC	T	878.43	PASS	AB=0.963;AC=28;AF=0.500;AN=56;BaseQRankSum=0.698;DP=350;FS=6.824;HRun=12;HaplotypeScore=50.9816;InbreedingCoeff=0.3701;MQ=74.99;MQ0=3;MQRankSum=1.958;QD=3.57;ReadPosRankSum=4.852;VQSLOD=-0.7587;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:19:15.06:43,15,0	1/1:4,1:6:10.98:75,11,0	0/1:19,0:14:7.57:8,0,91	0/1:19,0:12:0.84:1,0,59	1/1:4,0:5:2.51:7,3,0	0/0:11,0:11:11.97:0,12,100	1/1:8,0:30:34.08:105,34,0	1/1:14,0:19:4.59:14,5,0	1/1:6,7:13:22.72:167,23,0	1/1:8,1:10:8:52,8,0	1/1:7,3:10:5.88:40,6,0	0/0:12,0:12:9.90:0,10,72	0/0:5,0:5:5.51:0,6,50	0/0:7,0:12:10.09:0,10,72	1/1:5,7:12:14.90:116,15,0	1/1:4,7:10:0.36:58,0,0	1/1:4,15:20:39.92:290,40,0	0/1:16,1:17:19.26:19,0,165	0/1:14,0:14:30.74:31,0,32	0/0:4,0:4:5.98:0,6,52	0/1:12,3:15:14.25:14,0,39	0/1:7,0:7:14.32:16,0,14	0/0:6,0:6:2.98:0,3,21	0/0:9,0:9:5.03:0,5,29	0/0:4,0:4:0.89:0,1,2	0/0:14,0:15:2.65:0,3,21	0/0:16,0:15:18.02:0,18,175	0/0:10,0:10:11.40:0,11,79
chr10	85099757	.	TGA	T	3793.52	PASS	AB=0.923;AC=21;AF=0.375;AN=56;BaseQRankSum=5.854;DP=655;FS=0.422;HRun=0;HaplotypeScore=102.5434;InbreedingCoeff=0.5445;MQ=56.13;MQ0=7;MQRankSum=3.997;QD=11.26;ReadPosRankSum=6.039;VQSLOD=3.1532;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:42.04:0,42,237	1/1:1,5:6:15.05:179,15,0	0/0:33,0:17:24.03:0,24,278	0/0:34,1:18:15.05:0,15,210	0/1:14,2:16:25.25:25,0,345	0/0:11,0:11:9.48:0,9,297	1/1:11,30:42:30.68:563,31,0	0/0:30,0:29:35.97:0,36,308	1/1:6,21:27:14.08:389,14,0	1/1:8,20:30:64.81:597,65,0	1/1:3,11:15:27.38:298,27,0	0/0:24,0:24:18.29:0,18,671	0/0:16,0:16:39.02:0,39,498	0/1:22,4:26:50.15:50,0,599	1/1:10,18:27:35.94:407,36,0	0/0:23,0:22:2.97:0,3,20	1/1:10,19:28:45.14:536,45,0	1/1:11,28:39:60.16:701,60,0	0/0:19,0:16:29.70:0,30,236	0/0:7,0:7:0:0,0,1	0/0:13,0:12:0.47:0,0,1	0/1:15,1:16:8.65:9,0,288	0/0:17,0:17:26.80:0,27,313	0/1:42,4:46:14.02:14,0,1090	0/0:18,0:18:36.03:0,36,435	0/1:17,0:17:26.14:26,0,375	0/0:14,0:15:11.16:0,11,74	0/0:8,0:9:13.96:0,14,328
chr10	85099772	.	G	GAGAA	1163.69	PASS	AB=0.833;AC=4;AF=0.071;AN=56;BaseQRankSum=1.913;DP=633;FS=1.536;HRun=0;HaplotypeScore=124.4542;InbreedingCoeff=0.2964;MQ=63.08;MQ0=7;MQRankSum=-4.969;QD=12.65;ReadPosRankSum=-0.744;VQSLOD=2.9472;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,31:48:2.81:572,3,0	0/0:7,0:7:18.02:0,18,187	0/0:36,0:23:59.92:0,60,753	0/0:28,0:12:35.44:0,35,481	0/0:15,0:15:42.11:0,42,674	0/0:11,0:11:30.07:0,30,490	0/0:42,0:42:81.10:0,81,808	0/1:15,14:29:66.78:682,0,67	0/0:25,0:25:16.89:0,17,407	0/0:30,0:30:84.14:0,84,964	0/0:13,0:13:30.02:0,30,324	0/0:30,0:30:84.14:0,84,1225	0/0:17,0:17:51.13:0,51,844	0/0:26,0:26:72.12:0,72,1061	0/0:25,0:24:48.08:0,48,497	0/0:9,0:8:5.95:0,6,44	0/0:30,0:29:60.09:0,60,620	0/0:32,0:32:63.13:0,63,695	0/0:21,0:19:53.74:0,54,423	0/0:10,0:10:17.31:0,17,140	0/0:9,0:8:11.93:0,12,93	0/0:14,0:14:33.08:0,33,537	0/0:17,0:17:42.07:0,42,616	0/0:43,0:43:99:0,123,1858	0/0:17,0:17:48.05:0,48,710	0/0:21,0:21:54.10:0,54,801	0/1:14,0:14:7.08:7,0,110	0/0:13,0:13:29.31:0,29,468
chr10	85100369	.	AT	A	3130.50	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.209;DP=602;FS=3.451;HRun=7;HaplotypeScore=71.9917;InbreedingCoeff=0.9914;MQ=78.93;MQ0=0;MQRankSum=-0.542;QD=24.46;ReadPosRankSum=3.421;VQSLOD=4.1998;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1275	1/1:0,5:4:12.03:122,12,0	0/0:15,0:15:38.97:0,39,437	0/0:22,0:22:54.82:0,55,517	0/0:9,0:9:27.07:0,27,327	0/0:22,0:22:57.17:0,57,704	0/0:26,0:26:78.18:0,78,915	0/0:32,0:32:69.21:0,69,857	1/1:2,21:23:54.12:551,54,0	1/1:2,29:31:87.15:870,87,0	1/1:0,9:9:24.05:245,24,0	0/0:22,0:22:66.20:0,66,819	0/0:15,0:15:45.14:0,45,566	0/0:20,0:20:54.16:0,54,666	1/1:3,23:26:66.13:672,66,0	0/0:25,0:25:75.23:0,75,921	1/1:4,30:34:84.19:857,84,0	0/0:23,0:23:63.16:0,63,775	0/0:19,0:19:54.08:0,54,590	0/0:22,0:22:51.13:0,51,603	0/0:24,0:24:63.63:0,64,747	0/0:19,0:19:54.09:0,54,658	0/0:14,0:14:39.12:0,39,491	0/0:28,0:28:81.24:0,81,1005	0/0:28,0:28:78.22:0,78,957	0/0:26,0:26:75.21:0,75,908	0/0:18,0:18:51.14:0,51,611	0/0:7,0:7:18.06:0,18,226
chr10	85100589	.	GTTC	G	2385.15	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.817;DP=613;FS=2.491;HRun=0;HaplotypeScore=89.0925;InbreedingCoeff=0.9943;MQ=81.92;MQ0=0;MQRankSum=-2.761;QD=32.67;ReadPosRankSum=0.062;VQSLOD=3.6499;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,39:45:96.32:1526,96,0	0/0:6,0:6:18.06:0,18,396	0/0:16,0:16:45.12:0,45,892	0/0:25,0:25:63.22:0,63,1377	0/0:11,0:11:33.10:0,33,683	0/0:22,0:22:57.20:0,57,1225	0/0:29,0:29:81.22:0,81,1661	1/1:5,23:28:63.20:981,63,0	0/0:20,0:20:60.21:0,60,1310	0/0:22,0:22:66.23:0,66,1451	0/0:14,0:14:42.14:0,42,926	0/0:24,0:24:63.22:0,63,1377	0/0:18,0:18:51.17:0,51,1070	0/0:24,0:24:60.21:0,60,1302	0/0:26,0:26:72.25:0,72,1576	0/0:25,0:25:69.24:0,69,1497	0/0:35,0:35:90.31:0,90,1987	0/0:24,0:24:63.22:0,63,1389	0/0:18,0:18:42.14:0,42,907	0/0:20,0:20:57.20:0,57,1246	0/0:26,0:26:78.27:0,78,1700	0/0:15,0:15:36.12:0,36,788	0/0:11,0:11:30.10:0,30,662	0/0:48,0:48:99:0,138,2903	0/0:12,0:12:36.12:0,36,782	0/0:18,0:18:54.19:0,54,1171	0/0:22,0:22:66.23:0,66,1443	0/0:9,0:9:24.08:0,24,516
chr10	85100782	.	A	AAAAAC	793	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=4.848;DP=616;FS=2.515;HRun=0;HaplotypeScore=156.7048;InbreedingCoeff=0.5183;MQ=46.26;MQ0=39;MQRankSum=-4.641;QD=7.34;ReadPosRankSum=-0.433;VQSLOD=2.7375;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:33.70:0,34,435	0/0:6,0:5:3.90:0,4,23	0/0:54,0:7:5.49:0,5,40	0/0:46,0:9:12.72:0,13,91	0/0:16,0:15:40.47:0,40,282	0/0:32,0:27:65.68:0,66,552	0/0:14,0:13:24.73:0,25,145	0/0:38,0:35:63.76:0,64,378	0/0:19,0:19:20.57:0,21,122	0/0:21,0:16:16.15:0,16,110	0/1:5,0:4:0.21:1,0,0	0/0:16,0:16:35.66:0,36,268	0/0:10,0:10:21.45:0,21,198	0/0:20,0:20:43.96:0,44,392	0/0:17,0:17:14.41:0,14,109	1/1:23,0:25:4.32:354,4,0	0/0:18,0:16:19.13:0,19,130	0/0:23,0:22:49.15:0,49,382	0/1:21,0:13:20.32:141,0,20	0/1:18,0:18:33.05:97,0,33	1/1:3,6:10:7.68:84,8,0	0/0:11,0:11:14.91:0,15,121	0/0:11,0:11:27.43:0,27,246	0/0:22,0:21:30.14:0,30,318	0/0:21,0:21:44.61:0,45,406	0/0:27,0:26:64.76:0,65,505	1/1:28,0:27:6.12:249,6,0	0/0:20,0:18:12.46:0,12,144
chr10	85100793	.	AC	A	4809.27	PASS	AB=0.998;AC=41;AF=0.732;AN=56;BaseQRankSum=1.057;DP=616;FS=43.648;HRun=1;HaplotypeScore=76.2974;InbreedingCoeff=-0.1791;MQ=47.82;MQ0=36;MQRankSum=1.486;QD=7.92;ReadPosRankSum=-4.029;VQSLOD=-0.6070;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:46,1:46:89.20:561,89,0	1/1:7,0:6:11.97:98,12,0	0/1:50,0:7:7.42:23,0,7	0/1:45,1:11:15.36:35,0,15	0/1:17,0:16:68.29:69,0,68	0/1:31,0:26:99:124,0,236	1/1:16,0:15:43.16:281,43,0	1/1:34,0:31:46.18:367,46,0	1/1:21,0:21:53.53:393,54,0	1/1:20,0:15:41.80:346,42,0	1/1:8,0:7:17.96:148,18,0	1/1:13,3:16:24.15:178,24,0	1/1:10,0:10:11.17:116,11,0	1/1:21,1:22:31.16:255,31,0	1/1:19,0:18:47.62:361,48,0	0/1:25,0:25:52.40:52,0,72	1/1:24,0:22:44.44:329,44,0	1/1:21,0:19:53.67:410,54,0	0/1:23,0:14:38.79:84,0,39	0/1:19,0:19:47.68:48,0,54	0/1:11,0:10:0.36:0,0,13	1/1:11,0:11:22.89:119,23,0	0/1:12,0:12:53.23:53,0,61	0/1:20,0:20:52.35:52,0,103	0/1:20,0:20:99:120,0,110	0/1:28,0:27:44.91:45,0,257	0/1:28,0:27:35.63:141,0,36	0/0:9,0:7:0.79:0,1,48
chr10	85100799	.	A	AAAAAAACC	2404.42	PASS	AB=0.914;AC=9;AF=0.161;AN=56;BaseQRankSum=-1.589;DP=603;FS=9.086;HRun=0;HaplotypeScore=168.7088;InbreedingCoeff=0.5479;MQ=48.02;MQ0=35;MQRankSum=-5.902;QD=17.94;ReadPosRankSum=-0.494;VQSLOD=2.2498;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:74.43:0,74,697	0/0:8,0:7:17.75:0,18,229	0/0:51,0:9:18.95:0,19,199	0/0:43,0:10:8.54:0,9,72	0/0:16,0:15:20.51:0,21,327	0/0:32,0:27:67.74:0,68,1198	0/0:17,0:16:34.40:0,34,282	0/0:33,0:31:55.92:0,56,501	0/0:17,0:17:38.01:0,38,452	0/0:17,0:12:30.61:0,31,360	0/0:9,0:8:18.40:0,18,213	0/0:16,0:16:31.65:0,32,390	0/0:11,0:11:15.49:0,15,188	0/0:21,0:21:43.98:0,44,424	0/0:15,0:14:18.24:0,18,336	0/1:25,1:26:9.74:722,0,10	0/1:23,0:21:17.14:17,0,366	0/0:19,0:17:20.75:0,21,396	1/1:27,0:18:40.10:721,40,0	1/1:15,0:17:13.06:422,13,0	1/1:12,0:12:5.54:98,6,0	0/0:11,0:11:18.32:0,18,192	0/0:10,0:10:15.99:0,16,336	0/0:21,0:21:41.53:0,42,822	0/0:20,0:20:55.34:0,55,828	0/0:27,0:26:63.24:0,63,1138	0/1:20,6:27:75.41:573,0,75	0/0:9,0:7:14.90:0,15,254
chr10	85100801	.	A	AC	535.09	PASS	AB=0.883;AC=3;AF=0.054;AN=56;BaseQRankSum=2.472;DP=601;FS=7.690;HRun=0;HaplotypeScore=92.6228;InbreedingCoeff=-0.0682;MQ=51.60;MQ0=35;MQRankSum=2.610;QD=5.82;ReadPosRankSum=3.144;VQSLOD=2.9928;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:46,0:45:99:352,0,180	0/0:8,0:7:17.95:0,18,149	0/0:50,0:10:26.33:0,26,210	0/0:44,0:12:0.59:0,1,87	0/0:16,0:15:36.94:0,37,322	0/0:32,0:27:74.42:0,74,778	0/0:16,0:15:37.08:0,37,238	0/1:16,19:33:99:261,0,112	0/0:16,0:16:44.17:0,44,344	0/0:17,0:12:34.07:0,34,284	0/0:9,0:8:19.95:0,20,157	0/0:16,0:16:17.74:0,18,99	0/0:12,0:12:26.29:0,26,154	0/0:21,0:21:50.07:0,50,329	0/0:14,0:13:34.07:0,34,280	0/0:26,0:26:42.25:0,42,273	0/0:22,0:20:41.75:0,42,323	0/0:17,0:15:39.68:0,40,280	0/0:26,0:18:36.69:0,37,267	0/0:17,0:17:33.87:0,34,210	0/0:14,0:13:16.56:0,17,110	0/1:11,0:11:21.54:22,0,34	0/0:10,0:10:29.80:0,30,274	0/0:21,0:21:47.07:0,47,506	0/0:20,0:20:54.21:0,54,540	0/0:28,0:27:80.95:0,81,891	0/0:27,0:26:47.16:0,47,282	0/0:9,0:7:12.48:0,12,135
chr10	85100803	.	A	AAACCAAAC	3629.48	PASS	AB=0.710;AC=8;AF=0.143;AN=56;BaseQRankSum=-3.221;DP=597;FS=8.380;HRun=0;HaplotypeScore=184.6156;InbreedingCoeff=0.6666;MQ=52.63;MQ0=35;MQRankSum=-5.737;QD=32.41;ReadPosRankSum=0.054;VQSLOD=2.5984;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:72.60:0,73,1029	0/0:8,0:7:17.93:0,18,347	0/0:46,0:10:25:0,25,365	0/0:43,0:12:12.50:0,13,165	0/0:17,0:16:20.54:0,21,356	0/0:32,0:27:67.88:0,68,1368	0/0:17,0:16:34.39:0,34,419	0/0:34,0:32:67.41:0,67,791	0/0:16,0:16:38.03:0,38,724	0/0:17,0:12:30.68:0,31,563	0/0:11,0:10:27.53:0,28,438	0/0:16,0:16:34.65:0,35,476	0/0:10,0:10:18.49:0,18,282	0/0:23,0:23:47.14:0,47,621	0/0:15,0:14:34.04:0,34,612	0/1:10,15:26:33.27:911,0,33	0/0:23,0:22:22.01:0,22,704	0/0:15,0:13:17.27:0,17,558	1/1:18,1:23:55.81:1254,56,0	1/1:15,2:17:10.35:564,10,0	1/1:13,0:13:15.32:212,15,0	0/0:11,0:11:18.42:0,18,244	0/0:10,0:10:15.99:0,16,368	0/0:21,0:21:48.37:0,48,988	0/0:20,0:20:55.45:0,55,942	0/0:27,0:26:69.34:0,69,1325	0/1:18,5:23:99:688,0,107	0/0:9,0:7:15.04:0,15,289
chr10	85101009	.	AGG	A	2852.80	PASS	AB=0.524;AC=9;AF=0.161;AN=56;BaseQRankSum=7.152;DP=366;FS=2.371;HRun=4;HaplotypeScore=45.3699;InbreedingCoeff=0.8212;MQ=81.98;MQ0=0;MQRankSum=-3.077;QD=36.57;ReadPosRankSum=1.483;VQSLOD=2.8771;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.11:0,45,807	0/0:2,0:2:6.02:0,6,90	0/0:13,0:13:33.06:0,33,533	0/0:18,0:18:46.34:0,46,741	0/0:12,0:12:36.12:0,36,668	0/0:3,0:3:9.03:0,9,169	0/0:16,0:16:48.16:0,48,899	0/0:15,0:15:42.13:0,42,730	0/0:8,0:8:24.07:0,24,404	0/0:17,0:17:51.17:0,51,927	0/0:6,0:6:18.05:0,18,308	0/0:18,0:18:54.11:0,54,939	0/0:11,0:11:30.06:0,30,525	0/0:16,0:16:48.15:0,48,869	0/0:12,0:11:27.09:0,27,505	0/1:1,10:11:29.08:325,0,29	0/0:17,0:17:48.14:0,48,837	0/0:11,0:11:30.10:0,30,562	1/1:0,14:14:42.14:618,42,0	1/1:0,11:11:30.10:442,30,0	1/1:0,21:21:51.17:751,51,0	0/0:10,0:10:24.08:0,24,431	0/0:19,0:19:57.17:0,57,1023	0/0:16,0:16:42.14:0,42,780	0/0:13,0:13:36.12:0,36,659	0/0:13,0:13:36.07:0,36,603	1/1:0,21:21:60.20:881,60,0	0/0:5,0:5:12.04:0,12,225
chr10	85101886	.	TGGTGGACAGTGAG	T	2854.23	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.197;DP=620;FS=0.702;HRun=0;HaplotypeScore=270.9823;InbreedingCoeff=0.9449;MQ=85.14;MQ0=0;MQRankSum=-8.448;QD=31.37;ReadPosRankSum=0.801;VQSLOD=2.0674;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,123,7241	0/0:10,0:10:27.09:0,27,1609	0/0:23,0:23:45.15:0,45,2144	0/0:22,0:22:51.16:0,51,2356	0/0:15,0:15:36.12:0,36,1954	0/0:18,0:18:48.15:0,48,2361	0/0:35,0:35:84.27:0,84,4915	0/0:23,0:23:54.12:0,54,2675	0/0:17,0:17:45.15:0,45,2847	0/0:17,0:17:42.14:0,42,2382	0/0:11,0:11:30.10:0,30,1668	0/0:26,0:26:69.24:0,69,4007	0/0:22,0:22:63.22:0,63,3950	0/0:19,0:19:54.19:0,54,3193	0/0:17,0:17:48.16:0,48,3007	1/1:3,9:12:24.08:927,24,0	0/0:38,0:38:99:0,105,6247	0/0:30,0:30:81.26:0,81,4315	1/1:14,4:18:12.01:369,12,0	1/1:7,1:8:3.01:38,3,0	1/1:19,11:30:14.20:349,14,0	0/0:18,0:18:45.15:0,45,2488	0/0:13,0:13:36.12:0,36,2228	0/0:57,0:57:99:0,165,9459	0/0:19,0:19:57.18:0,57,3205	0/0:21,0:21:48.16:0,48,2753	1/1:7,16:23:39.06:1335,39,0	0/0:11,0:11:33.10:0,33,1913
chr10	85102481	.	G	GA	2607.92	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.881;DP=587;FS=0.896;HRun=9;HaplotypeScore=75.0436;InbreedingCoeff=0.9779;MQ=77.52;MQ0=0;MQRankSum=-0.035;QD=20.53;ReadPosRankSum=3.452;VQSLOD=4.3693;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:80.93:0,81,698	0/0:9,0:9:26.99:0,27,233	0/0:12,0:12:18.50:0,18,138	0/0:18,0:18:24.92:0,25,190	0/0:26,0:26:71.95:0,72,618	0/0:27,1:27:41.80:0,42,592	1/1:1,19:20:48.13:531,48,0	0/0:32,0:32:89.95:0,90,777	0/0:15,0:15:38.96:0,39,331	0/0:17,0:17:41.99:0,42,365	0/0:16,0:16:41.98:0,42,364	1/1:6,12:18:7.04:306,7,0	1/1:3,12:15:29.84:332,30,0	1/1:7,23:31:19.96:659,20,0	0/0:23,0:23:65.96:0,66,569	0/0:21,0:21:50.77:0,51,424	0/0:17,0:17:47.96:0,48,409	1/1:3,19:22:48.13:531,48,0	0/0:23,0:24:68:0,68,574	0/0:25,0:25:34.70:0,35,463	0/0:12,0:12:26.95:0,27,231	1/1:6,15:21:39.99:433,40,0	0/0:25,0:25:50.97:0,51,442	0/0:27,0:27:74.95:0,75,643	0/0:17,0:18:47.01:0,47,394	0/0:33,0:33:92.97:0,93,807	0/0:21,0:21:44.97:0,45,386	0/0:9,0:9:20.99:0,21,182
chr10	85102861	.	GGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	G	8088.59	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=8.969;DP=539;FS=5.905;HRun=0;HaplotypeScore=369.1157;InbreedingCoeff=0.8091;MQ=68.85;MQ0=12;MQRankSum=-7.648;QD=30.76;ReadPosRankSum=3.753;VQSLOD=2.2415;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,6:36:6.49:443,6,0	1/1:2,0:4:6.02:419,6,0	0/0:28,0:19:9.03:0,9,313	0/0:25,0:16:6.01:0,6,123	0/0:20,0:20:21.02:0,21,1244	0/0:14,0:14:12.51:0,13,1159	0/0:22,0:24:46.67:0,47,3164	1/1:20,0:20:3:47,3,0	1/1:10,0:15:12.04:838,12,0	1/1:16,0:24:17.60:1257,18,0	1/1:13,0:16:12.04:683,12,0	0/0:7,0:8:14.51:0,15,781	0/0:15,0:18:42.14:0,42,3598	0/0:18,0:18:21.07:0,21,1745	1/1:15,0:22:14.47:1046,14,0	1/1:12,3:15:6.02:460,6,0	1/1:30,0:30:3.01:65,3,0	0/0:15,0:15:27.09:0,27,2453	1/1:10,1:11:3.01:230,3,0	1/1:7,9:16:24.08:1682,24,0	1/1:25,0:21:0.19:0,1,0	0/0:14,0:15:20.16:0,20,2117	0/0:16,0:16:27.09:0,27,2821	0/0:19,0:20:15.60:0,16,3269	0/0:17,0:17:18.03:0,18,1786	0/0:19,0:19:35.44:0,35,2338	1/1:21,6:26:11.27:919,11,0	0/0:15,0:13:30.57:0,31,2023
chr10	85103806	.	GTTAC	G	15357.41	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=15.179;DP=664;FS=0.633;HRun=0;HaplotypeScore=118.6983;InbreedingCoeff=0.9984;MQ=94.20;MQ0=0;MQRankSum=-8.624;QD=40.95;ReadPosRankSum=3.502;VQSLOD=5.4026;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,46:46:99:2042,111,0	1/1:3,10:12:27.09:468,27,0	0/0:33,0:33:87.23:0,87,2008	0/0:31,0:31:77.35:0,77,1939	0/0:20,0:20:51.14:0,51,1282	0/0:21,0:21:63.21:0,63,1563	1/1:0,23:23:57.20:1048,57,0	1/1:7,25:32:75.22:1311,75,0	1/1:0,21:21:54.19:993,54,0	1/1:3,23:26:69.16:1155,69,0	1/1:2,13:15:24.08:441,24,0	0/0:28,0:28:78.26:0,78,1970	0/0:20,0:20:51.16:0,51,1291	0/0:25,0:25:72.22:0,72,1771	1/1:2,31:33:87.25:1548,87,0	1/1:0,19:19:51.17:936,51,0	1/1:1,22:23:42.14:773,42,0	1/1:3,14:17:33.07:572,33,0	1/1:5,22:27:65.78:983,66,0	1/1:3,22:25:39.13:717,39,0	1/1:0,26:26:56.39:1047,56,0	0/0:14,0:14:36.12:0,36,950	0/0:14,0:14:33.08:0,33,813	0/0:30,0:30:84.29:0,84,2215	0/0:21,0:21:54.13:0,54,1312	0/0:26,0:26:69.19:0,69,1562	1/1:0,29:29:71.77:1323,72,0	0/0:6,0:6:18.06:0,18,472
chr10	85105192	.	CTCT	C	463.02	PASS	AB=0.963;AC=3;AF=0.054;AN=56;BaseQRankSum=8.900;DP=577;FS=4.591;HRun=0;HaplotypeScore=93.2069;InbreedingCoeff=0.6760;MQ=80.75;MQ0=0;MQRankSum=-5.884;QD=11.58;ReadPosRankSum=-0.555;VQSLOD=2.9844;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,2558	0/0:15,0:15:45.15:0,45,1016	0/0:20,0:19:57.07:0,57,1098	0/0:21,0:20:20.65:0,21,1068	0/0:25,0:25:75.26:0,75,1737	0/0:25,0:25:75.24:0,75,1669	0/1:25,1:26:11.26:216,0,11	0/0:30,0:30:87.27:0,87,1922	0/0:22,0:22:66.23:0,66,1538	0/0:16,0:16:48.16:0,48,1091	0/0:10,0:10:30.09:0,30,651	0/0:14,0:14:42.14:0,42,951	0/0:13,0:13:39.12:0,39,876	0/0:20,0:20:60.18:0,60,1297	0/0:22,0:22:66.23:0,66,1538	0/0:23,0:23:69.24:0,69,1557	0/0:35,0:35:99:0,105,2386	1/1:10,4:14:30.17:353,30,0	0/0:17,0:17:51.18:0,51,1158	0/0:20,0:20:57.20:0,57,1256	0/0:15,0:15:42.62:0,43,987	0/0:16,0:16:48.15:0,48,1073	0/0:24,0:24:72.25:0,72,1699	0/0:20,0:20:60.21:0,60,1396	0/0:19,0:19:54.17:0,54,1229	0/0:27,0:27:81.28:0,81,1905	0/0:21,0:21:63.22:0,63,1482	0/0:9,0:9:27.09:0,27,590
chr10	85105194	.	CT	C	788.33	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.327;DP=574;FS=6.011;HRun=1;HaplotypeScore=68.6886;InbreedingCoeff=0.9990;MQ=80.37;MQ0=0;MQRankSum=-6.160;QD=20.21;ReadPosRankSum=-2.777;VQSLOD=2.8328;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1621	0/0:15,0:15:45.10:0,45,629	0/0:20,0:19:49.62:0,50,630	0/0:20,0:20:43.36:0,43,676	0/0:25,0:25:75.23:0,75,1074	0/0:25,0:25:75.19:0,75,1024	1/1:10,15:25:70.09:563,70,0	0/0:29,0:29:84.20:0,84,1142	0/0:22,0:22:66.21:0,66,966	0/0:15,0:15:45.15:0,45,671	0/0:10,0:10:30.10:0,30,426	0/0:14,0:14:42.12:0,42,587	0/0:12,0:12:36.12:0,36,538	0/0:19,0:19:57.16:0,57,809	0/0:22,0:22:66.21:0,66,965	0/0:23,0:23:69.19:0,69,958	0/0:36,0:36:99:0,105,1486	1/1:7,7:14:39:347,39,0	0/0:18,0:18:54.15:0,54,736	0/0:20,0:20:57.16:0,57,797	0/0:15,0:15:42.10:0,42,608	0/0:15,0:15:45.15:0,45,657	0/0:25,0:25:75.24:0,75,1097	0/0:20,0:20:60.19:0,60,877	0/0:18,0:18:51.17:0,51,760	0/0:28,0:28:81.26:0,81,1176	0/0:21,0:21:63.20:0,63,921	0/0:9,0:9:27.06:0,27,363
chr10	85105199	.	CCCT	C	1001.45	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.218;DP=563;FS=2.268;HRun=0;HaplotypeScore=91.2256;InbreedingCoeff=0.9987;MQ=78.93;MQ0=0;MQRankSum=-5.677;QD=27.07;ReadPosRankSum=-2.371;VQSLOD=3.3127;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,2290	0/0:15,0:15:45.10:0,45,683	0/0:17,0:16:42.57:0,43,697	0/0:24,0:23:53.86:0,54,1006	0/0:24,0:24:69.22:0,69,1432	0/0:23,0:23:66.21:0,66,1358	1/1:7,14:21:57.05:581,57,0	0/0:26,0:26:66.07:0,66,1157	0/0:21,0:21:60.17:0,60,894	0/0:16,0:16:48.15:0,48,744	0/0:13,0:13:36.09:0,36,514	0/0:14,0:14:42.13:0,42,822	0/0:12,0:12:36.12:0,36,769	0/0:18,0:18:51.15:0,51,1050	0/0:21,0:21:63.20:0,63,953	0/0:21,0:21:63.20:0,63,1289	0/0:36,0:36:99:0,105,1593	1/1:16,0:16:39.08:542,39,0	0/0:15,0:15:45.15:0,45,910	0/0:18,0:18:51.18:0,51,1085	0/0:16,0:16:45.13:0,45,909	0/0:15,0:15:45.14:0,45,878	0/0:25,0:25:75.26:0,75,1587	0/0:20,0:20:60.19:0,60,1207	0/0:20,0:20:57:0,57,1086	0/0:29,0:29:81.09:0,81,1573	0/0:22,0:22:66.19:0,66,1296	0/0:8,0:8:24.07:0,24,473
chr10	85105200	.	CCT	C	798.84	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.993;DP=565;FS=3.071;HRun=0;HaplotypeScore=81.0898;InbreedingCoeff=0.9987;MQ=79.55;MQ0=0;MQRankSum=-4.543;QD=21.59;ReadPosRankSum=-2.892;VQSLOD=3.3996;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1851	0/0:15,0:15:45.10:0,45,687	0/0:17,0:16:42.87:0,43,582	0/0:25,0:24:37.87:0,38,780	0/0:24,0:24:72.22:0,72,1188	0/0:23,0:23:66.21:0,66,1098	1/1:21,0:21:57.02:547,57,0	0/0:26,0:26:69.06:0,69,972	0/0:21,0:21:60.17:0,60,949	0/0:16,0:16:48.14:0,48,736	0/0:13,0:13:36.08:0,36,495	0/0:15,0:15:45.12:0,45,688	0/0:12,0:12:36.12:0,36,622	0/0:18,0:18:51.15:0,51,852	0/0:21,0:21:63.20:0,63,1016	0/0:21,0:21:63.20:0,63,1049	0/0:36,0:36:99:0,108,1660	1/1:9,7:16:39.04:374,39,0	0/0:15,0:15:45.14:0,45,709	0/0:19,0:19:54.17:0,54,895	0/0:16,0:16:45.14:0,45,736	0/0:16,0:16:48.11:0,48,722	0/0:25,0:25:75.26:0,75,1279	0/0:20,0:20:60.18:0,60,983	0/0:20,0:20:57:0,57,891	0/0:27,0:27:81.07:0,81,1300	0/0:22,0:22:66.18:0,66,1046	0/0:8,0:8:24.06:0,24,387
chr10	85105616	.	CA	C	1187.05	PASS	AB=0.855;AC=16;AF=0.286;AN=56;BaseQRankSum=1.289;DP=542;FS=6.452;HRun=14;HaplotypeScore=61.7165;InbreedingCoeff=0.5299;MQ=60.21;MQ0=11;MQRankSum=1.973;QD=6.21;ReadPosRankSum=1.702;VQSLOD=2.3433;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:34:74.69:0,75,429	1/1:3,3:6:8.92:62,9,0	0/0:10,0:6:10.85:0,11,61	0/1:11,0:8:8.78:17,0,9	0/0:15,0:15:26.99:0,27,242	0/1:17,3:21:19.86:20,0,251	0/0:18,1:18:9.21:0,9,207	0/0:19,0:35:66.56:0,67,405	1/1:6,10:18:20.17:192,20,0	1/1:3,14:18:15.81:245,16,0	0/1:5,9:13:4.09:120,0,4	0/0:15,0:17:15.12:0,15,251	0/0:16,1:17:15.26:0,15,256	0/0:23,0:21:21.16:0,21,324	1/1:6,16:23:55.47:373,55,0	0/0:15,0:20:23.33:0,23,147	1/1:8,20:28:40.70:323,41,0	0/0:6,1:16:17.05:0,17,187	0/0:18,1:23:38.98:0,39,464	0/0:15,1:15:8.72:0,9,193	0/0:29,0:28:39.52:0,40,363	0/0:16,0:16:38.95:0,39,344	0/1:11,1:13:0.68:1,0,164	0/0:15,3:19:21.30:0,21,328	0/1:11,3:15:2.59:3,0,204	0/1:19,3:22:10.86:11,0,326	0/0:18,2:18:9.44:0,9,208	0/0:14,0:12:26.73:0,27,212
chr10	85107115	.	T	TAA	7741.57	PASS	AB=0.565;AC=29;AF=0.518;AN=56;BaseQRankSum=1.936;DP=541;FS=3.700;HRun=10;HaplotypeScore=80.4438;InbreedingCoeff=0.9347;MQ=72.96;MQ0=0;MQRankSum=-0.066;QD=24.58;ReadPosRankSum=1.174;VQSLOD=4.8313;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:41:57.06:266,57,0	1/1:2,5:7:15.05:224,15,0	0/0:11,0:10:12.24:0,12,146	0/0:12,0:12:5.63:0,6,143	0/0:21,0:21:41.87:0,42,411	0/0:18,0:19:44.78:0,45,439	1/1:2,19:22:53.67:770,54,0	1/1:12,0:28:41.10:174,41,0	1/1:3,6:10:20.56:277,21,0	1/1:4,16:20:39.04:496,39,0	1/1:2,15:18:46.88:603,47,0	0/0:17,0:17:42.06:0,42,427	0/0:15,0:15:39.07:0,39,396	0/0:15,0:15:38.94:0,39,374	1/1:3,13:17:41.63:590,42,0	1/1:3,15:20:50.14:689,50,0	1/1:4,22:26:66.22:984,66,0	0/1:3,0:13:1.72:76,0,2	1/1:8,10:22:37.59:472,38,0	1/1:1,16:19:50:591,50,0	1/1:2,16:21:35.61:501,36,0	0/0:23,0:23:53.10:0,53,588	0/0:17,0:17:37.32:0,37,382	0/0:28,0:28:78.15:0,78,785	0/0:18,0:18:35.95:0,36,358	0/0:20,0:20:45.05:0,45,457	1/1:5,25:31:68.97:1029,69,0	0/0:10,0:10:27.04:0,27,275
chr10	85107521	.	CGG	C	1635.80	PASS	AB=0.765;AC=17;AF=0.304;AN=56;BaseQRankSum=2.396;DP=374;FS=3.400;HRun=11;HaplotypeScore=57.6277;InbreedingCoeff=0.2283;MQ=73.55;MQ0=1;MQRankSum=-1.262;QD=8.02;ReadPosRankSum=5.345;VQSLOD=-0.3081;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:16,1:29:10.42:10,0,62	1/1:3,6:9:15.03:159,15,0	0/0:15,0:10:18.05:0,18,244	0/0:10,0:7:9:0,9,79	0/0:9,0:9:11.01:0,11,110	0/0:11,0:11:3.48:0,3,46	0/0:22,1:26:29.35:0,29,630	0/1:7,2:11:6.88:52,0,7	0/1:5,9:14:3.97:170,0,4	1/1:6,4:10:12:126,12,0	1/1:9,7:17:20.76:202,21,0	0/0:9,0:15:29.79:0,30,173	0/0:7,0:12:13.64:0,14,93	0/0:7,0:14:21.71:0,22,115	0/1:6,8:15:16.07:206,0,16	0/1:8,1:10:6.38:6,0,121	1/1:5,29:34:74.50:796,75,0	0/1:9,2:15:38.85:39,0,138	0/1:2,0:2:14.66:19,0,15	0/0:7,0:7:6.01:0,6,70	0/1:16,2:29:0.50:0,0,90	0/0:6,0:9:13.87:0,14,63	0/0:2,0:3:5.51:0,6,54	0/0:16,0:18:47.03:0,47,546	0/0:4,0:4:3.01:0,3,45	0/1:8,0:8:18.29:18,0,27	0/0:9,0:14:10.58:0,11,52	0/0:2,0:3:2.50:0,2,9
chr10	85107952	.	TG	T	394.97	PASS	AB=0.636;AC=17;AF=0.472;AN=36;BaseQRankSum=0.960;DP=93;FS=3.304;HRun=7;HaplotypeScore=24.2885;InbreedingCoeff=0.4885;MQ=112.33;MQ0=0;MQRankSum=-1.567;QD=11.97;ReadPosRankSum=2.679;VQSLOD=0.8668;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:6:15.03:153,15,0	./.	0/0:9,0:7:6.14:0,6,65	0/0:14,0:12:14.87:0,15,147	0/0:4,0:4:6.02:0,6,75	./.	0/0:4,0:4:6.01:0,6,62	./.	1/1:0,1:1:3.01:31,3,0	1/1:1,1:2:3.01:31,3,0	./.	./.	0/0:2,0:2:3.01:0,3,38	./.	1/1:2,1:3:3.01:31,3,0	0/1:3,4:7:4.86:107,0,5	1/1:2,2:4:2.83:30,3,0	0/0:4,0:4:6.02:0,6,73	1/1:0,1:1:3.01:31,3,0	1/1:1,1:2:2.98:22,3,0	./.	./.	0/0:4,0:4:9.03:0,9,110	0/0:3,0:3:5.93:0,6,55	0/0:4,0:4:5.99:0,6,49	./.	1/1:1,6:7:9.02:92,9,0	./.
chr10	85108127	.	T	TCCCACCTGCTGAGGG	4523.42	PASS	AB=0.800;AC=39;AF=0.975;AN=40;BaseQRankSum=-0.117;DP=88;FS=0.000;HRun=0;HaplotypeScore=63.3492;InbreedingCoeff=-0.0213;MQ=115.25;MQ0=0;MQRankSum=-1.377;QD=54.50;ReadPosRankSum=-0.910;VQSLOD=3.7512;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:7.84:214,8,0	./.	1/1:3,0:6:12.51:713,13,0	0/1:9,1:11:99:664,0,100	1/1:1,0:1:2.97:20,3,0	1/1:3,0:3:9.03:257,9,0	1/1:6,0:6:15.05:407,15,0	1/1:9,0:9:12.04:411,12,0	1/1:1,0:1:3.01:69,3,0	./.	1/1:1,0:1:3.01:40,3,0	1/1:4,0:5:12.04:288,12,0	1/1:2,0:2:3.01:85,3,0	./.	1/1:4,0:4:6.02:249,6,0	1/1:2,0:2:6.02:140,6,0	1/1:4,0:4:9.03:264,9,0	./.	1/1:4,0:4:9:198,9,0	1/1:1,0:1:3.01:42,3,0	1/1:4,0:4:3.01:62,3,0	./.	1/1:1,0:1:3.01:85,3,0	1/1:4,0:4:0.47:1,0,0	./.	1/1:6,0:6:12.02:315,12,0	./.	./.
chr10	85109784	.	CCAT	C	192.70	PASS	AB=0.848;AC=5;AF=0.089;AN=56;BaseQRankSum=6.164;DP=469;FS=11.054;HRun=0;HaplotypeScore=89.0812;InbreedingCoeff=-0.0959;MQ=80.76;MQ0=2;MQRankSum=-4.226;QD=2.41;ReadPosRankSum=-2.341;VQSLOD=0.6007;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:42.14:0,42,1018	0/1:3,2:6:6.22:6,0,209	0/0:30,0:23:67.05:0,67,1309	0/0:44,0:34:38.76:0,39,1636	0/0:17,8:25:30.57:0,31,690	0/0:19,0:19:51.09:0,51,1148	0/0:15,1:16:22.74:0,23,818	0/0:20,0:19:51.15:0,51,1208	0/0:13,0:15:31.94:0,32,855	0/1:19,4:23:99:143,0,1297	0/0:8,3:11:21.07:0,21,497	0/0:14,0:14:18.32:0,18,653	0/0:12,3:15:2.53:0,3,706	0/0:12,0:12:33.54:0,34,758	0/0:7,0:7:18.06:0,18,427	0/0:11,0:11:30.10:0,30,736	0/0:16,0:17:18.57:0,19,992	0/0:8,0:8:24.08:0,24,577	0/0:14,0:14:42.14:0,42,1028	0/0:13,3:16:33.54:0,34,708	0/0:7,0:7:12.04:0,12,296	0/0:13,1:14:26.80:0,27,656	0/0:14,4:18:24.05:0,24,693	0/0:29,0:29:78.23:0,78,1839	0/0:11,1:11:27.98:0,28,665	0/1:16,1:17:1.86:2,0,1105	0/1:22,2:24:31.50:31,0,1419	0/1:7,3:10:99:115,0,285
chr10	85109810	.	CT	C	644.09	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.619;DP=504;FS=8.066;HRun=7;HaplotypeScore=66.4237;InbreedingCoeff=0.9795;MQ=86.19;MQ0=0;MQRankSum=0.073;QD=25.76;ReadPosRankSum=-0.744;VQSLOD=3.8420;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.09:0,51,606	0/0:7,0:7:21.07:0,21,264	0/0:20,0:18:39.11:0,39,471	0/0:32,0:32:37.66:0,38,651	0/0:23,0:23:60.11:0,60,719	0/0:26,0:26:75.24:0,75,943	1/1:0,17:17:51.12:520,51,0	0/0:18,0:18:48.15:0,48,604	0/0:18,0:18:48.11:0,48,586	0/0:18,0:18:48.15:0,48,598	0/0:12,0:12:36.01:0,36,415	0/0:18,0:18:54.17:0,54,679	0/0:21,0:21:63.20:0,63,792	0/0:15,0:15:45.10:0,45,548	0/0:9,0:9:24.06:0,24,289	0/0:16,0:16:45.14:0,45,566	0/0:21,0:21:60.11:0,60,719	1/1:0,8:8:24.05:245,24,0	0/0:16,0:16:45.14:0,45,554	0/0:18,0:18:51.11:0,51,610	0/0:11,0:11:30.08:0,30,362	0/0:18,0:18:48.15:0,48,604	0/0:15,0:15:39.09:0,39,474	0/0:39,0:39:99:0,114,1349	0/0:15,0:15:39.08:0,39,468	0/0:22,1:23:29.58:0,30,686	0/0:27,0:27:81.22:0,81,1001	0/0:4,0:4:12.04:0,12,151
chr10	85110243	.	ATG	A	9581.60	PASS	AB=0.756;AC=30;AF=0.536;AN=56;BaseQRankSum=14.288;DP=733;FS=11.263;HRun=0;HaplotypeScore=114.7265;InbreedingCoeff=0.8591;MQ=66.11;MQ0=3;MQRankSum=-0.330;QD=23.31;ReadPosRankSum=1.192;VQSLOD=5.0392;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,26:39:72:834,72,0	1/1:1,10:11:24.08:295,24,0	0/0:53,0:39:63.95:0,64,891	0/0:28,0:21:41.25:0,41,569	0/0:30,0:30:75.26:0,75,1217	0/1:21,2:23:34.71:35,0,643	1/1:7,17:24:42.09:500,42,0	1/1:14,19:35:59.82:692,60,0	1/1:2,16:19:44.97:531,45,0	1/1:6,18:25:60.02:713,60,0	1/1:3,27:31:84.01:977,84,0	0/0:21,0:21:44.30:0,44,732	0/0:16,0:16:42.14:0,42,685	0/0:21,0:21:14.24:0,14,735	1/1:2,17:18:45.14:554,45,0	1/1:2,26:28:69.22:850,69,0	1/1:4,29:34:68.95:826,69,0	0/1:5,10:16:10.51:209,0,11	1/1:6,11:16:30.09:369,30,0	1/1:5,25:31:71.99:831,72,0	1/1:11,30:41:75.24:923,75,0	0/0:14,0:14:33.11:0,33,538	0/0:33,0:33:87.30:0,87,1408	0/0:27,0:27:66.18:0,66,1048	0/0:23,0:23:57.19:0,57,924	0/0:28,1:29:32.29:0,32,1040	1/1:5,13:18:36.11:443,36,0	0/0:27,0:27:64.44:0,64,1001
chr10	85110307	.	G	GAA	1100.09	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.264;DP=533;FS=0.000;HRun=11;HaplotypeScore=100.7485;InbreedingCoeff=0.8558;MQ=74.71;MQ0=0;MQRankSum=-2.434;QD=25.58;ReadPosRankSum=0.840;VQSLOD=3.5364;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,32:43:86.77:1195,87,0	0/0:2,0:2:6.01:0,6,58	0/0:15,0:18:30.76:0,31,228	0/0:12,0:13:10.26:0,10,92	0/0:21,0:23:50.49:0,50,460	0/0:10,0:10:30.05:0,30,291	0/0:16,0:18:32.42:0,32,278	0/0:30,0:31:68.74:0,69,648	0/0:15,0:15:30.01:0,30,285	0/0:21,0:22:23.89:0,24,280	0/0:20,0:20:47.99:0,48,460	0/0:15,0:16:38.73:0,39,361	0/0:11,0:11:16.11:0,16,171	0/0:18,0:18:40.26:0,40,375	0/0:16,0:16:35.92:0,36,333	0/0:22,0:22:44.97:0,45,425	0/0:23,0:23:50.91:0,51,487	0/0:13,0:13:30.04:0,30,291	0/0:23,0:24:56.77:0,57,534	0/0:28,0:29:56.69:0,57,533	0/0:17,0:17:39:0,39,373	0/0:14,0:14:38.78:0,39,356	0/0:21,0:24:47.40:0,47,480	0/0:19,0:20:47.77:0,48,448	0/0:11,0:12:32.78:0,33,302	0/0:29,0:29:59.98:0,60,581	0/0:17,0:16:38.69:0,39,427	0/0:13,0:13:33.04:0,33,320
chr10	85110858	.	AT	A	208.33	PASS	AB=1.000;AC=3;AF=0.056;AN=54;BaseQRankSum=4.592;DP=432;FS=7.762;HRun=9;HaplotypeScore=42.3637;InbreedingCoeff=0.6240;MQ=74.76;MQ0=0;MQRankSum=0.776;QD=10.42;ReadPosRankSum=-1.452;VQSLOD=1.1647;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.19:0,63,727	./.	0/0:13,0:13:1.47:0,1,206	0/1:6,0:6:0.52:1,0,86	0/0:23,0:23:66.20:0,66,762	0/0:27,0:27:78.22:0,78,892	1/1:2,12:14:33.02:302,33,0	0/0:28,0:27:66.17:0,66,743	0/0:10,0:9:27.08:0,27,312	0/0:20,0:21:56.99:0,57,630	0/0:17,0:17:51.14:0,51,578	0/0:8,0:8:24.07:0,24,277	0/0:14,0:14:42.12:0,42,485	0/0:15,0:15:45.13:0,45,519	0/0:15,0:14:36.11:0,36,415	0/0:9,0:8:21.06:0,21,242	0/0:21,0:19:57.17:0,57,658	0/0:24,0:24:59.91:0,60,670	0/0:20,0:20:54.16:0,54,621	0/0:19,0:19:54.15:0,54,615	0/0:7,0:7:21.06:0,21,242	0/0:6,0:6:18.05:0,18,208	0/0:12,0:12:30.09:0,30,346	0/0:3,0:3:9.03:0,9,104	0/0:23,0:23:60.18:0,60,692	0/0:23,0:23:57.17:0,57,658	0/0:20,0:20:54.10:0,54,597	0/0:10,0:10:27.08:0,27,312
chr10	85111011	.	G	GAAA	4386.30	PASS	AB=0.762;AC=29;AF=0.537;AN=54;BaseQRankSum=8.526;DP=408;FS=0.496;HRun=12;HaplotypeScore=90.1563;InbreedingCoeff=0.7616;MQ=45.02;MQ0=8;MQRankSum=-8.135;QD=16.94;ReadPosRankSum=-2.970;VQSLOD=2.9124;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,1:31:53.46:567,53,0	1/1:7,0:7:11.62:123,12,0	./.	0/0:3,0:2:5.96:0,6,52	0/0:19,0:19:29.81:0,30,290	0/0:13,0:15:29.74:0,30,300	0/1:3,8:11:0.61:378,0,1	1/1:27,0:22:18.06:231,18,0	1/1:9,0:9:14.21:159,14,0	1/1:22,0:19:38.75:421,39,0	1/1:20,0:20:22.60:260,23,0	0/0:5,0:5:8.98:0,9,101	0/1:11,0:11:8.45:8,0,77	0/0:15,0:16:29.77:0,30,306	1/1:8,0:8:18.06:243,18,0	1/1:8,0:8:15.05:214,15,0	1/1:22,0:19:39.13:510,39,0	0/1:10,1:14:8.49:164,0,8	1/1:19,0:17:26.93:317,27,0	1/1:15,0:13:9.05:280,9,0	1/1:9,0:9:6.02:75,6,0	0/0:15,0:17:31.36:0,31,343	0/0:11,0:14:20.87:0,21,247	0/0:12,0:13:32.97:0,33,354	0/0:21,0:21:10.93:0,11,334	0/0:12,0:12:17.94:0,18,202	1/1:18,0:18:33.11:436,33,0	0/0:11,0:11:20.82:0,21,219
chr10	85111021	.	A	AAAAG	6354.07	PASS	AB=1.000;AC=28;AF=0.519;AN=54;BaseQRankSum=6.789;DP=404;FS=1.865;HRun=0;HaplotypeScore=93.5900;InbreedingCoeff=0.8111;MQ=45.39;MQ0=6;MQRankSum=-9.843;QD=26.81;ReadPosRankSum=-1.311;VQSLOD=4.1422;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,12:34:80.25:1245,80,0	1/1:4,3:7:11.98:195,12,0	./.	0/0:3,0:2:6.02:0,6,84	0/0:15,0:15:42.07:0,42,571	0/0:18,0:18:53.89:0,54,650	0/1:12,0:12:54.71:69,0,55	1/1:23,4:23:47.41:536,47,0	1/1:7,1:10:26.91:305,27,0	1/1:12,6:17:50.78:665,51,0	1/1:17,1:20:39.79:377,40,0	0/0:4,0:4:9.02:0,9,147	0/1:6,0:6:2.23:2,0,171	0/0:17,0:17:38.98:0,39,520	1/1:7,5:11:29.98:460,30,0	1/1:4,3:6:17.97:274,18,0	1/1:15,7:21:44.59:579,45,0	0/0:20,0:17:1.09:0,1,146	1/1:16,2:16:32.89:434,33,0	1/1:9,2:12:10.36:291,10,0	1/1:9,2:11:23.92:331,24,0	0/0:17,0:17:44.92:0,45,613	0/0:12,0:12:32.72:0,33,421	0/0:13,0:13:33.09:0,33,521	0/0:19,0:19:45.97:0,46,644	0/0:16,0:16:45.07:0,45,538	1/1:7,5:13:38.85:590,39,0	0/0:11,0:11:30.04:0,30,401
chr10	85111051	.	TAAA	T	6821.32	PASS	AB=0.600;AC=29;AF=0.518;AN=56;BaseQRankSum=9.826;DP=423;FS=0.387;HRun=12;HaplotypeScore=88.1513;InbreedingCoeff=0.9197;MQ=67.13;MQ0=1;MQRankSum=-7.758;QD=28.07;ReadPosRankSum=2.189;VQSLOD=4.3042;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,24:31:71.93:799,72,0	1/1:1,5:6:15:172,15,0	0/0:6,0:6:17.99:0,18,210	0/0:13,0:11:20.99:0,21,288	0/0:19,0:19:51.17:0,51,969	0/0:22,0:23:69.23:0,69,1293	1/1:2,7:9:15.04:190,15,0	1/1:5,21:25:63.16:796,63,0	1/1:3,6:9:21.01:250,21,0	1/1:4,17:21:51.13:643,51,0	1/1:2,13:15:39.09:493,39,0	0/0:6,0:6:18.06:0,18,355	0/0:9,0:9:24.08:0,24,460	0/0:11,0:12:33.11:0,33,607	1/1:1,12:13:36.07:437,36,0	1/1:2,9:11:26.92:273,27,0	1/1:4,21:25:57.15:719,57,0	0/1:5,10:15:26.14:346,0,26	1/1:0,12:12:36.12:455,36,0	1/1:2,16:18:39.05:475,39,0	1/1:3,11:14:20.86:244,21,0	0/0:15,0:16:45.08:0,45,760	0/0:14,0:15:39.11:0,39,674	0/0:13,0:14:31.35:0,31,580	0/0:13,0:13:39.12:0,39,683	0/0:21,0:22:63.19:0,63,1203	1/1:4,14:18:42.11:531,42,0	0/0:11,0:11:33.10:0,33,598
chr10	85111377	.	C	CT	194.71	PASS	AB=0.923;AC=3;AF=0.054;AN=56;BaseQRankSum=0.666;DP=390;FS=2.864;HRun=10;HaplotypeScore=104.0630;InbreedingCoeff=0.4975;MQ=70.48;MQ0=1;MQRankSum=-2.993;QD=8.11;ReadPosRankSum=0.889;VQSLOD=2.5149;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:47.91:0,48,394	0/0:4,0:4:5.99:0,6,49	0/0:28,0:22:29.50:0,29,248	0/0:8,0:8:8.97:0,9,74	0/0:15,0:16:35.93:0,36,295	0/0:16,0:16:32.94:0,33,271	0/0:17,0:17:23.92:0,24,197	0/0:23,0:23:47.88:0,48,390	0/0:13,0:13:20.96:0,21,172	0/0:12,0:12:17.94:0,18,148	0/0:10,0:10:14.98:0,15,123	0/0:16,0:16:35.95:0,36,295	0/0:11,0:11:23.97:0,24,197	0/0:13,0:13:14.95:0,15,123	0/1:11,1:12:1.99:2,0,192	0/0:8,0:8:17.98:0,18,148	0/0:24,0:26:51.33:0,51,392	1/1:4,8:11:27.07:288,27,0	0/0:14,0:14:29.96:0,30,246	0/0:12,0:11:20.95:0,21,172	0/0:13,0:13:17.95:0,18,148	0/0:12,0:12:20.95:0,21,172	0/0:11,0:12:20.94:0,21,172	0/0:11,0:11:14.94:0,15,123	0/0:13,0:13:23.95:0,24,197	0/0:15,0:15:29.95:0,30,246	0/0:15,1:16:0.97:0,1,214	0/0:4,0:4:5.99:0,6,49
chr10	85111754	.	GGT	G	464.71	PASS	AB=1.000;AC=19;AF=0.432;AN=44;BaseQRankSum=3.219;DP=160;FS=0.000;HRun=0;HaplotypeScore=144.1955;InbreedingCoeff=0.5074;MQ=44.57;MQ0=0;MQRankSum=0.346;QD=5.74;ReadPosRankSum=0.838;VQSLOD=3.2391;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:8,0:3:9.75:10,0,64	0/1:5,0:4:6.46:21,0,6	0/1:3,0:3:0:0,0,0	0/0:7,0:7:9.02:0,9,88	0/0:8,0:8:10.78:0,11,73	1/1:13,0:13:0.94:2,1,0	1/1:3,3:6:11.61:96,12,0	1/1:2,5:7:18.01:190,18,0	./.	0/0:5,0:5:6.01:0,6,59	0/0:12,0:12:27.05:0,27,266	0/0:6,0:6:6:0,6,60	1/1:8,1:9:3:28,3,0	1/1:8,6:14:15.02:143,15,0	1/1:1,1:2:3.01:32,3,0	0/0:5,0:5:5.98:0,6,47	1/1:5,1:6:3.01:33,3,0	./.	./.	0/0:5,0:5:15.03:0,15,148	0/0:2,0:2:6.01:0,6,60	./.	0/0:3,0:3:6.01:0,6,58	0/0:11,0:11:24.50:0,24,226	1/1:6,2:8:5.47:57,5,0	0/0:1,0:1:3:0,3,28
chr10	85111787	.	T	TGAA	2100.35	PASS	AB=0.975;AC=24;AF=0.444;AN=54;BaseQRankSum=2.366;DP=241;FS=16.872;HRun=0;HaplotypeScore=344.5433;InbreedingCoeff=0.3299;MQ=45.86;MQ0=1;MQRankSum=-1.054;QD=14.10;ReadPosRankSum=-0.991;VQSLOD=2.2970;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:4:0.11:2,0,0	1/1:4,0:4:7.38:81,7,0	0/0:8,0:4:8.75:0,9,69	0/0:6,0:4:5.98:0,6,63	0/1:12,0:12:14.13:14,0,28	0/0:9,0:9:11.17:0,11,188	1/1:3,4:7:20.74:308,21,0	0/0:5,0:5:4.09:0,4,32	1/1:7,3:10:8.93:175,9,0	1/1:8,5:13:11.01:280,11,0	0/1:6,0:6:8.42:65,0,8	0/1:5,0:5:2.68:3,0,91	0/0:17,0:17:13.98:0,14,411	0/1:11,0:11:9.93:10,0,103	1/1:14,1:15:20.61:261,21,0	1/1:14,6:20:9.48:362,9,0	0/1:7,1:8:14.77:99,0,15	1/1:1,2:3:2.08:109,2,0	0/1:9,1:10:84.26:141,0,84	0/1:5,0:5:0.80:56,0,1	./.	0/0:10,0:10:15.05:0,15,244	0/0:7,0:7:6.49:0,6,94	0/0:1,0:1:2.68:0,3,11	0/0:7,0:7:4.16:0,4,90	0/0:15,0:15:15.01:0,15,417	1/1:14,2:16:18.97:306,19,0	0/0:6,0:6:3.74:0,4,52
chr10	85113144	.	CAGAGAGACAGAGAGAGAG	C	16198.77	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=16.347;DP=650;FS=6.642;HRun=0;HaplotypeScore=275.4616;InbreedingCoeff=0.9683;MQ=61.67;MQ0=8;MQRankSum=-9.761;QD=61.83;ReadPosRankSum=2.371;VQSLOD=3.5787;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:22.63:1104,23,0	1/1:0,6:6:9.03:375,9,0	0/0:34,0:20:45:0,45,1435	0/0:37,0:24:46.21:0,46,1336	0/0:44,0:44:99:0,126,8444	0/0:30,0:30:87.27:0,87,5541	0/0:27,0:27:78.23:0,78,4709	1/1:6,16:18:48.15:1028,48,0	1/1:0,17:17:21.07:1069,21,0	1/1:0,35:35:93.23:3466,93,0	1/1:0,24:24:21.07:1100,21,0	0/0:19,0:19:57.16:0,57,3668	0/0:21,0:21:63.22:0,63,4141	0/0:24,0:24:72.18:0,72,4457	1/1:0,14:14:18.06:911,18,0	1/1:0,15:15:30.10:1542,30,0	1/1:1,18:19:12.04:544,12,0	0/0:22,0:22:66.16:0,66,4055	1/1:3,22:24:59.83:1467,60,0	1/1:1,20:20:24.08:1258,24,0	1/1:0,21:21:6.02:314,6,0	0/0:26,0:26:78.20:0,78,4372	0/0:26,0:26:75.24:0,75,4878	0/0:18,0:18:48.16:0,48,3474	0/0:20,0:20:60.21:0,60,4067	0/0:23,0:23:15.26:0,15,4441	1/1:0,21:21:39.61:2019,40,0	0/0:17,0:17:51.18:0,51,3665
chr10	85113803	.	TAAAAAAAAAAAAAAG	T	8876.40	PASS	AB=0.738;AC=21;AF=0.375;AN=56;BaseQRankSum=9.576;DP=415;FS=1.617;HRun=0;HaplotypeScore=159.4354;InbreedingCoeff=0.6696;MQ=58.92;MQ0=13;MQRankSum=-8.067;QD=51.01;ReadPosRankSum=5.256;VQSLOD=4.6148;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:5,17:21:14.78:656,0,15	0/1:4,0:4:12.61:31,0,13	0/0:44,0:13:4.29:0,4,523	0/0:26,0:10:13.74:0,14,281	0/0:25,0:25:55.06:0,55,2337	0/0:20,0:21:60.21:0,60,3583	0/0:8,0:8:21.07:0,21,942	1/1:13,0:17:0.71:201,1,0	1/1:0,9:9:24.08:906,24,0	1/1:6,14:20:35.94:1078,36,0	1/1:2,19:22:35.93:1154,36,0	0/0:7,0:7:21.07:0,21,1243	0/0:8,0:8:24.08:0,24,1541	0/0:9,0:10:24.08:0,24,1314	1/1:1,7:8:15.04:569,15,0	1/1:1,9:10:21.06:803,21,0	1/1:2,10:12:15.03:560,15,0	0/0:16,0:16:39.12:0,39,2042	0/1:6,7:11:25.49:412,0,25	1/1:7,10:15:29.95:1002,30,0	0/0:1,0:1:0:0,0,0	0/0:8,0:8:15.05:0,15,670	0/0:7,0:7:9.03:0,9,494	0/0:4,0:5:6.91:0,7,276	0/0:19,0:20:42.14:0,42,2374	0/0:19,0:17:33.02:0,33,1448	1/1:3,16:19:38.90:1504,39,0	0/0:12,0:13:30.09:0,30,1551
chr10	85113818	.	GA	G	87.14	PASS	AB=0.991;AC=14;AF=0.269;AN=52;BaseQRankSum=10.813;DP=416;FS=2.401;HRun=14;HaplotypeScore=113.5905;InbreedingCoeff=-0.1064;MQ=62.10;MQ0=13;MQRankSum=-7.616;QD=0.41;ReadPosRankSum=8.227;VQSLOD=-0.3445;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:18:16.12:16,0,16	./.	0/1:49,1:13:38.34:38,0,101	0/0:31,0:14:13.41:0,13,153	0/0:31,0:30:25.11:0,25,486	0/0:25,0:25:63.12:0,63,676	0/1:8,1:10:2.17:2,0,177	1/1:6,0:5:2.69:7,3,0	0/1:9,0:9:8.76:28,0,9	0/1:20,0:20:5.22:5,0,102	0/1:21,0:21:24.04:24,0,36	0/0:12,0:12:24:0,24,249	0/0:8,0:8:18.04:0,18,191	0/0:10,0:10:1.09:0,1,218	0/1:12,0:12:2.67:3,0,81	0/1:11,0:11:17.60:18,0,28	0/1:13,0:13:13.05:13,0,37	0/0:17,1:18:28.12:0,28,503	0/1:11,0:10:1.52:2,0,81	0/1:10,0:10:1.89:26,0,2	./.	0/0:7,0:7:15:0,15,153	0/0:8,0:8:15.04:0,15,166	0/0:4,0:4:9:0,9,80	0/0:18,0:18:36.07:0,36,376	0/0:13,2:13:33.08:0,33,354	0/1:19,0:19:12.49:40,0,12	0/0:15,0:15:28.66:0,29,282
chr10	85113903	.	G	GACACACACACAC	9600.30	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=8.427;DP=470;FS=9.943;HRun=0;HaplotypeScore=189.2466;InbreedingCoeff=0.8508;MQ=62.96;MQ0=4;MQRankSum=-12.108;QD=37.65;ReadPosRankSum=-1.422;VQSLOD=3.6191;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:25:17.92:416,18,0	0/1:11,0:11:91.34:388,0,91	0/0:30,0:16:45.01:0,45,1120	0/0:35,0:15:33.57:0,34,848	0/0:21,0:21:48.16:0,48,1589	0/0:19,0:18:39.02:0,39,1175	1/1:16,0:16:15.05:418,15,0	1/1:34,0:32:78.17:961,78,0	1/1:5,0:5:8.62:277,9,0	1/1:33,0:31:79.71:2379,80,0	1/1:20,0:20:6.02:169,6,0	0/0:9,0:9:15.05:0,15,441	0/0:14,0:13:30.10:0,30,1071	0/0:6,0:6:9.03:0,9,253	1/1:20,0:20:12.04:329,12,0	1/1:16,0:16:24.01:494,24,0	1/1:5,5:10:7.27:112,7,0	1/1:11,0:12:24.04:693,24,0	1/1:11,0:10:21.06:679,21,0	1/1:19,0:18:30.09:921,30,0	1/1:3,0:3:0.47:1,0,0	0/0:10,0:10:27.05:0,27,614	0/0:13,0:13:30:0,30,888	0/0:20,0:20:56.94:0,57,1970	0/0:14,0:14:30.10:0,30,1027	0/0:17,0:17:39.12:0,39,1192	1/1:19,0:19:39.13:1364,39,0	0/0:7,0:7:17.96:0,18,393
chr10	85113909	.	C	CAGAG	214.13	PASS	AB=1.000;AC=19;AF=0.475;AN=40;BaseQRankSum=0.940;DP=472;FS=4.982;HRun=0;HaplotypeScore=168.0440;InbreedingCoeff=0.3784;MQ=58.89;MQ0=4;MQRankSum=-1.277;QD=1.13;ReadPosRankSum=-0.916;VQSLOD=2.5591;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:26:0:0,0,0	0/0:10,0:11:3.37:0,3,9	./.	./.	0/1:21,0:21:3.06:5,0,3	0/0:19,0:18:8.59:0,9,82	0/1:13,0:16:0:0,0,0	./.	0/0:4,0:5:4.98:0,5,19	0/0:33,0:30:3.01:0,3,46	0/0:18,0:18:3.01:0,3,35	1/1:4,5:9:3.01:70,3,0	1/1:16,0:15:5.05:55,5,0	./.	./.	1/1:14,0:14:5.83:33,6,0	1/1:10,0:10:4.08:22,4,0	0/0:12,0:12:0.66:0,1,23	./.	1/1:18,0:17:5.87:36,6,0	./.	1/1:11,0:11:3.01:69,3,0	0/1:13,0:13:6.27:16,0,6	0/0:27,0:27:14.58:0,15,266	0/1:15,0:15:0:0,0,0	0/0:16,0:16:8.30:0,8,128	1/1:19,0:19:3.62:28,4,0	./.
chr10	85113957	.	GGA	G	952.56	PASS	AB=0.939;AC=22;AF=0.407;AN=54;BaseQRankSum=8.906;DP=403;FS=46.977;HRun=0;HaplotypeScore=112.2602;InbreedingCoeff=0.1448;MQ=37.53;MQ0=24;MQRankSum=-6.776;QD=4.20;ReadPosRankSum=1.644;VQSLOD=1.0774;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,3:18:0.34:0,0,0	0/0:11,0:9:2.65:0,3,8	0/0:21,0:2:5.99:0,6,63	0/0:40,0:4:7.44:0,7,59	0/1:14,1:15:74.12:74,0,184	0/0:28,0:28:38.31:0,38,661	0/0:16,0:15:5.04:0,5,33	1/1:23,0:21:49.49:228,49,0	1/1:4,1:7:8:29,8,0	0/1:17,1:15:34.98:158,0,35	0/0:14,0:14:1.87:0,2,34	0/0:10,0:10:20.96:0,21,282	0/0:6,3:9:1.08:0,1,230	0/0:6,4:9:18.06:0,18,283	0/1:10,2:11:0:0,0,0	1/1:10,1:11:5.90:70,6,0	1/1:4,0:6:7.47:51,7,0	0/1:9,1:9:52.12:61,0,52	0/1:12,0:11:22.03:22,0,71	1/1:16,1:16:11.44:94,11,0	./.	0/1:7,0:7:23.52:24,0,185	0/1:11,1:11:25.66:26,0,130	0/1:24,0:24:29.70:30,0,640	0/0:8,0:8:15.05:0,15,244	0/1:20,1:20:55.75:56,0,636	1/1:11,2:12:25.47:193,25,0	0/0:4,0:3:3.01:0,3,44
chr10	85113958	.	GAAGA	G	1620.67	PASS	AB=0.956;AC=24;AF=0.429;AN=56;BaseQRankSum=9.745;DP=407;FS=43.225;HRun=0;HaplotypeScore=116.1665;InbreedingCoeff=0.4911;MQ=37.75;MQ0=24;MQRankSum=-8.658;QD=8.44;ReadPosRankSum=-0.940;VQSLOD=0.6166;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:18:8.62:50,9,0	1/1:11,0:9:13.64:95,14,0	0/0:21,0:2:6.02:0,6,91	0/0:40,0:4:9.03:0,9,140	0/0:15,0:15:8.79:0,9,324	0/0:26,0:27:28.26:0,28,1002	0/0:17,0:16:4.98:0,5,24	1/1:22,0:21:57.51:546,58,0	0/1:6,2:8:9.87:37,0,10	1/1:17,1:15:6.04:355,6,0	0/1:13,0:14:10.78:11,0,13	0/0:10,0:10:20.90:0,21,447	0/0:9,0:9:18.03:0,18,399	0/0:10,0:9:18.06:0,18,420	1/1:10,0:9:8.83:54,9,0	1/1:11,1:12:17.57:142,18,0	1/1:6,0:6:8.64:55,9,0	0/1:10,0:9:29.10:44,0,29	0/1:12,0:11:33.57:34,0,35	1/1:17,0:16:14.73:132,15,0	0/0:8,0:8:0:0,0,0	0/1:7,0:7:0.62:1,0,285	0/1:12,0:11:1.89:2,0,240	0/0:25,0:25:55.53:0,56,1084	0/0:5,0:8:15.05:0,15,383	0/0:20,0:20:14.68:0,15,1011	1/1:13,1:13:26.94:252,27,0	0/0:4,0:3:3.01:0,3,68
chr10	85113959	.	AAGAG	A	3044.38	PASS	AB=0.800;AC=25;AF=0.463;AN=54;BaseQRankSum=10.423;DP=409;FS=8.377;HRun=0;HaplotypeScore=112.0905;InbreedingCoeff=0.8067;MQ=37.94;MQ0=23;MQRankSum=-10.319;QD=17.50;ReadPosRankSum=-3.628;VQSLOD=1.9737;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,11:18:9.03:108,9,0	1/1:3,8:9:18.01:202,18,0	0/0:21,0:2:6.02:0,6,83	0/0:40,0:4:9.03:0,9,182	0/0:16,0:16:24.04:0,24,464	0/0:26,0:27:45.11:0,45,1042	0/0:5,0:16:0:0,0,0	1/1:3,20:21:59.22:957,59,0	0/1:6,2:8:7.02:56,0,7	1/1:9,9:15:38.98:586,39,0	1/1:3,11:14:15.77:118,16,0	0/0:10,0:10:18.06:0,18,440	0/0:9,0:9:20.96:0,21,425	0/0:10,0:9:18.06:0,18,447	1/1:4,5:9:9.03:107,9,0	1/1:4,8:12:20.71:182,21,0	1/1:5,0:7:8.85:79,9,0	1/1:5,0:9:4.42:31,4,0	1/1:4,8:11:17.27:177,17,0	1/1:5,12:16:34.27:294,34,0	./.	0/0:7,0:7:14.54:0,15,309	0/0:13,0:12:19.29:0,19,358	0/0:24,0:24:54.09:0,54,1064	0/0:8,0:8:15.05:0,15,354	0/0:21,0:20:49.30:0,49,972	1/1:4,10:13:23.29:350,23,0	0/0:4,0:3:3.01:0,3,75
chr10	85114263	.	C	CGG	9037.73	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=19.194;DP=629;FS=20.001;HRun=0;HaplotypeScore=122.4406;InbreedingCoeff=0.9775;MQ=85.77;MQ0=0;MQRankSum=-5.838;QD=30.33;ReadPosRankSum=1.386;VQSLOD=5.1653;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,48:48:99:2341,126,0	1/1:1,0:12:3.49:63,3,0	0/0:21,0:21:48.05:0,48,704	0/0:24,0:24:61.88:0,62,925	0/0:28,0:28:81.23:0,81,1245	0/0:28,0:28:84.22:0,84,1271	0/0:24,0:24:72.20:0,72,1122	1/1:0,20:21:63.13:1067,63,0	1/1:0,0:17:35.73:115,36,0	1/1:1,0:28:53.81:210,54,0	1/1:0,0:17:27.55:90,28,0	0/0:25,0:25:75.24:0,75,1197	0/0:14,0:14:42.12:0,42,633	0/0:21,0:21:60.20:0,60,975	1/1:0,0:27:56.08:192,56,0	1/1:1,17:18:51.17:968,51,0	1/1:0,0:34:69.29:247,69,0	0/0:22,0:22:60.20:0,60,976	1/1:4,17:21:54.16:966,54,0	1/1:1,12:13:36.04:662,36,0	1/1:0,30:31:81.28:1503,81,0	0/0:18,0:18:51.17:0,51,831	0/0:20,0:20:54.16:0,54,833	0/0:31,0:31:93.30:0,93,1491	0/0:15,0:15:42.14:0,42,685	0/0:28,0:28:81.27:0,81,1298	1/1:0,11:11:33.11:614,33,0	0/0:12,0:12:33.09:0,33,512
chr10	85116369	.	C	CG	1600.93	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.771;DP=656;FS=6.258;HRun=0;HaplotypeScore=65.2901;InbreedingCoeff=0.9993;MQ=78.97;MQ0=0;MQRankSum=-0.975;QD=38.12;ReadPosRankSum=1.404;VQSLOD=3.8752;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.12:0,93,1210	0/0:14,0:14:39.13:0,39,540	0/0:25,0:25:49.89:0,50,820	0/0:22,0:21:54.33:0,54,630	0/0:21,0:21:63.19:0,63,862	0/0:26,0:26:78.25:0,78,1075	1/1:0,24:24:60.20:957,60,0	0/0:40,0:40:99:0,120,1635	0/0:12,0:12:36.11:0,36,487	0/0:26,0:26:78.24:0,78,1060	0/0:16,0:16:39.13:0,39,545	0/0:16,0:16:48.15:0,48,654	0/0:31,0:31:90.30:0,90,1253	0/0:16,0:16:48.15:0,48,654	0/0:15,0:14:45.15:0,45,628	0/0:17,0:17:51.16:0,51,696	0/0:24,0:24:72.24:0,72,1005	1/1:1,17:18:48.16:765,48,0	0/0:34,0:34:99:0,102,1397	0/0:17,0:17:51.16:0,51,696	0/0:39,0:39:99:0,114,1524	0/0:22,0:22:63.20:0,63,867	0/0:27,0:27:81.26:0,81,1110	0/0:27,0:27:78.20:0,78,1051	0/0:21,0:21:63.21:0,63,880	0/0:30,0:30:90.30:0,90,1258	0/0:34,0:34:99:0,102,1375	0/0:10,0:10:27.09:0,27,377
chr10	85116653	.	TC	T	1784.47	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.275;DP=610;FS=7.153;HRun=4;HaplotypeScore=59.0565;InbreedingCoeff=0.9946;MQ=81.53;MQ0=1;MQRankSum=-1.403;QD=27.04;ReadPosRankSum=2.950;VQSLOD=2.8869;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,135,1850	0/0:8,0:8:24.08:0,24,336	0/0:16,0:16:48.10:0,48,607	0/0:20,0:20:45.07:0,45,593	0/0:24,0:24:72.23:0,72,983	0/0:17,0:17:45.12:0,45,590	1/1:3,31:34:81.25:971,81,0	0/0:24,0:23:69.17:0,69,882	0/0:27,0:27:81.25:0,81,1100	0/0:19,0:19:42.10:0,42,552	0/0:15,0:15:42.13:0,42,571	0/0:16,0:16:48.08:0,48,627	0/0:12,0:12:36.11:0,36,487	0/0:20,0:20:57.18:0,57,782	0/0:19,0:19:54.18:0,54,755	0/0:16,0:16:45.14:0,45,614	0/0:39,0:39:99:0,111,1534	1/1:1,31:32:78.24:935,78,0	0/0:22,0:22:66.18:0,66,873	0/0:21,0:21:54.16:0,54,717	0/0:27,0:26:75.21:0,75,999	0/0:14,0:14:36.07:0,36,437	0/0:19,0:19:54.15:0,54,706	0/0:33,0:33:96.31:0,96,1326	0/0:19,0:19:48.15:0,48,655	0/0:20,0:20:51.11:0,51,672	0/0:22,0:21:63.19:0,63,848	0/0:6,0:6:18.06:0,18,251
chr10	85116726	.	CTT	C	237.09	PASS	AB=0.929;AC=3;AF=0.054;AN=56;BaseQRankSum=4.763;DP=519;FS=4.104;HRun=6;HaplotypeScore=67.2278;InbreedingCoeff=0.6130;MQ=64.09;MQ0=8;MQRankSum=-2.373;QD=8.47;ReadPosRankSum=-1.022;VQSLOD=-0.6845;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:99:0,117,2032	0/0:6,0:6:18.06:0,18,288	0/0:13,0:7:9.03:0,9,141	0/1:12,1:7:25.60:26,0,169	0/0:24,0:23:54.18:0,54,940	0/0:13,0:13:33.11:0,33,590	1/1:6,9:15:32.20:317,32,0	0/0:26,0:26:69.19:0,69,1136	0/0:15,0:14:39.13:0,39,674	0/0:25,0:25:66.23:0,66,1175	0/0:17,0:17:42.14:0,42,735	0/0:17,0:16:42.14:0,42,742	0/0:7,0:7:18.06:0,18,312	0/0:15,0:15:42.10:0,42,670	0/0:11,0:11:27.09:0,27,477	0/0:11,0:11:30.10:0,30,536	0/0:39,0:39:99:0,108,1782	0/0:29,0:27:66.22:0,66,1145	0/0:31,0:30:87.75:0,88,1421	0/0:16,0:16:39.12:0,39,659	0/0:13,0:13:39.13:0,39,691	0/0:14,0:13:27.05:0,27,395	0/0:16,0:15:45.14:0,45,756	0/0:27,0:27:81.28:0,81,1435	0/0:15,0:14:36.11:0,36,585	0/0:19,0:19:54.18:0,54,948	0/0:22,0:22:48.62:0,49,820	0/0:8,0:8:24.08:0,24,405
chr10	85116734	.	TTTTCTTTTC	T	569.49	PASS	AB=0.690;AC=1;AF=0.018;AN=56;BaseQRankSum=6.038;DP=524;FS=4.014;HRun=0;HaplotypeScore=129.9781;InbreedingCoeff=-0.0241;MQ=55.59;MQ0=28;MQRankSum=-3.951;QD=28.47;ReadPosRankSum=-0.257;VQSLOD=3.3560;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:45:99:0,124,4625	0/0:7,0:6:18.01:0,18,315	0/0:9,0:3:6.49:0,6,104	0/0:12,0:5:12.02:0,12,334	0/0:19,0:18:39.10:0,39,1633	0/0:14,0:13:33.10:0,33,1365	0/1:11,9:19:60.56:644,0,61	0/0:29,0:28:69.22:0,69,2095	0/0:13,0:11:30.10:0,30,1104	0/0:23,0:23:66.21:0,66,2558	0/0:16,0:16:39.02:0,39,1492	0/0:18,0:16:39.11:0,39,1509	0/0:7,0:6:15.05:0,15,676	0/0:16,0:15:39.12:0,39,1360	0/0:14,0:12:24.06:0,24,996	0/0:13,0:12:30.08:0,30,1273	0/0:45,0:41:99:0,111,4358	0/0:27,0:25:60.16:0,60,2169	0/0:33,0:32:61.61:0,62,1934	0/0:14,0:13:33.08:0,33,1051	0/0:14,0:13:36.12:0,36,1356	0/0:9,0:8:18.05:0,18,672	0/0:17,0:16:48.15:0,48,1651	0/0:30,0:29:84.25:0,84,3340	0/0:13,0:12:30.09:0,30,1151	0/0:18,0:18:51.15:0,51,1854	0/0:20,0:19:39.27:0,39,1340	0/0:7,0:7:21.03:0,21,560
chr10	85116743	.	C	CT	1396.45	PASS	AB=0.846;AC=12;AF=0.214;AN=56;BaseQRankSum=-2.766;DP=507;FS=3.124;HRun=10;HaplotypeScore=55.2236;InbreedingCoeff=0.5074;MQ=52.54;MQ0=30;MQRankSum=-0.550;QD=10.19;ReadPosRankSum=1.027;VQSLOD=2.4363;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,1:44:57.04:0,57,666	0/0:4,0:3:2.98:0,3,25	0/1:7,0:2:0:0,0,0	0/0:11,0:4:2.99:0,3,24	0/0:15,1:15:0.97:0,1,212	0/0:14,0:13:23.94:0,24,194	1/1:14,5:18:4.06:213,4,0	0/0:25,0:24:41.89:0,42,342	0/0:16,0:15:25.94:0,26,199	0/0:21,0:21:44.92:0,45,369	0/1:15,1:16:21.80:22,0,167	0/0:17,0:16:31.93:0,32,248	0/0:6,0:5:14.97:0,15,120	0/0:17,0:17:31.96:0,32,248	0/0:13,0:11:23.93:0,24,191	0/0:12,0:11:26.91:0,27,215	0/0:48,1:46:75.03:0,75,806	0/1:16,10:25:11.06:326,0,11	1/1:9,14:24:44.47:405,44,0	1/1:4,7:10:18.05:192,18,0	0/1:9,6:14:28.22:139,0,28	0/0:7,0:7:11.98:0,12,98	0/0:20,0:21:32.71:0,33,236	0/0:26,2:29:10.60:0,11,499	0/0:17,0:15:24.25:0,24,234	0/0:17,0:17:38.91:0,39,316	1/1:3,12:16:26.87:259,27,0	0/0:4,0:4:8.95:0,9,67
chr10	85118195	.	GT	G	3116.13	PASS	AB=0.680;AC=32;AF=0.571;AN=56;BaseQRankSum=4.147;DP=578;FS=6.676;HRun=15;HaplotypeScore=61.2311;InbreedingCoeff=0.5400;MQ=67.53;MQ0=8;MQRankSum=1.655;QD=8.24;ReadPosRankSum=2.281;VQSLOD=2.8109;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,17:22:26.16:255,26,0	0/1:3,5:8:53.44:53,0,58	0/0:39,0:16:7.83:0,8,60	0/0:24,0:10:5.01:0,5,28	0/0:24,0:24:39.36:0,39,337	0/0:23,3:27:4.74:0,5,372	1/1:4,10:14:23.59:154,24,0	1/1:10,16:24:18:247,18,0	1/1:4,10:15:0.24:99,0,0	1/1:11,19:31:43.98:333,44,0	1/1:3,28:34:67.78:408,68,0	1/1:5,11:16:22.49:139,22,0	0/1:7,13:20:2.16:173,0,2	0/1:8,8:16:15.93:32,0,16	0/1:10,15:25:5.40:222,0,5	1/1:4,8:12:17.38:115,17,0	1/1:10,15:25:31.40:194,31,0	0/0:20,0:19:43.36:0,43,347	0/1:8,7:15:16.77:102,0,17	1/1:3,18:22:34.43:279,34,0	1/1:5,9:14:13.73:78,14,0	1/1:3,16:19:26.05:162,26,0	0/0:20,3:24:22.03:0,22,396	0/0:7,0:8:17.84:0,18,146	0/1:13,2:15:2.54:3,0,228	0/0:25,2:27:14.49:0,14,335	1/1:11,17:29:22.93:268,23,0	0/0:7,0:7:17.99:0,18,155
chr10	85118294	.	AT	A	346.90	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.398;DP=503;FS=10.092;HRun=9;HaplotypeScore=55.1733;InbreedingCoeff=0.8482;MQ=68.47;MQ0=0;MQRankSum=1.377;QD=16.52;ReadPosRankSum=-0.730;VQSLOD=2.6787;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:26:77.87:0,78,841	0/0:9,0:9:27.06:0,27,301	0/0:5,0:5:2.19:0,2,45	0/0:11,0:8:15.78:0,16,127	0/0:30,0:30:84.23:0,84,959	0/0:25,0:25:66.20:0,66,762	1/1:2,8:10:21.01:192,21,0	0/0:31,0:31:75.19:0,75,832	0/0:17,0:17:51.15:0,51,589	0/0:23,0:23:57.17:0,57,657	0/0:18,0:18:54.15:0,54,615	0/0:15,0:15:42.10:0,42,466	0/0:18,0:18:54.16:0,54,623	0/0:20,0:20:48.10:0,48,539	0/0:14,0:14:39.36:0,39,419	0/0:16,0:16:42.11:0,42,475	0/0:23,0:23:57.17:0,57,658	1/1:1,10:11:30.02:275,30,0	0/0:18,0:18:48.14:0,48,554	0/0:25,0:25:69.19:0,69,786	0/0:6,0:6:18.05:0,18,207	0/0:12,0:14:35.77:0,36,375	0/0:15,0:16:41.92:0,42,451	0/0:10,1:11:5.63:0,6,319	0/0:15,0:15:45.12:0,45,510	0/0:27,0:29:75.04:0,75,828	0/0:31,0:31:90.27:0,90,1037	0/0:16,0:16:33.10:0,33,381
chr10	85119375	.	TG	T	4768.50	PASS	AB=0.938;AC=20;AF=0.357;AN=56;BaseQRankSum=6.850;DP=556;FS=0.377;HRun=9;HaplotypeScore=58.8649;InbreedingCoeff=0.8460;MQ=82.38;MQ0=0;MQRankSum=-1.426;QD=21.01;ReadPosRankSum=-1.006;VQSLOD=5.1077;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,42:51:99:1070,117,0	0/1:6,1:7:8.94:9,0,155	0/0:20,0:20:39.07:0,39,425	0/0:16,0:16:26.01:0,26,248	0/0:25,2:27:16.53:0,17,495	0/0:27,1:28:41.71:0,42,720	1/1:3,15:18:45.02:412,45,0	1/1:5,22:27:63.01:571,63,0	0/0:19,0:19:54.15:0,54,614	0/0:23,0:23:51.15:0,51,589	0/0:27,1:28:23.66:0,24,503	0/0:18,0:18:36.04:0,36,388	0/0:16,0:16:42.12:0,42,476	0/0:9,1:10:2.63:0,3,280	0/0:18,0:18:48.12:0,48,535	1/1:1,8:9:24.01:220,24,0	0/0:27,1:28:50.75:0,51,819	1/1:4,16:20:48:433,48,0	1/1:2,18:20:47.99:434,48,0	1/1:2,13:15:36.01:329,36,0	1/1:3,30:33:90.05:822,90,0	0/0:9,0:9:27.08:0,27,312	0/0:11,0:11:27.07:0,27,302	0/1:8,0:8:3.35:3,0,218	0/0:18,0:18:45.13:0,45,512	0/0:24,1:25:17.67:0,18,457	1/1:1,18:19:51.03:467,51,0	0/0:15,0:15:33.07:0,33,360
chr10	85120316	.	C	CA	568.39	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.246;DP=600;FS=23.284;HRun=8;HaplotypeScore=69.5677;InbreedingCoeff=0.8820;MQ=68.04;MQ0=0;MQRankSum=-0.263;QD=21.05;ReadPosRankSum=-0.334;VQSLOD=2.1047;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:59.36:0,59,717	0/0:10,0:10:27.01:0,27,247	0/0:15,0:15:30.44:0,30,264	0/0:8,0:8:14.60:0,15,131	0/0:35,0:35:99:0,99,896	0/0:26,0:26:65.70:0,66,586	1/1:4,11:16:5.46:299,5,0	0/0:30,0:30:75.02:0,75,686	0/0:22,0:22:60.01:0,60,545	0/0:22,0:22:60.02:0,60,546	0/0:34,0:34:96.04:0,96,874	0/0:19,0:19:48:0,48,435	0/0:24,0:24:60.03:0,60,549	0/0:16,0:16:16.58:0,17,380	0/0:31,0:31:90.05:0,90,823	0/0:16,0:16:48.03:0,48,439	0/0:24,0:24:65.99:0,66,592	1/1:0,11:11:33.10:381,33,0	0/0:11,0:11:23.97:0,24,212	0/0:27,0:27:69.03:0,69,631	0/0:29,0:29:84.01:0,84,759	0/0:18,0:18:50.99:0,51,456	0/0:21,0:21:60.02:0,60,545	0/0:18,0:17:44.98:0,45,404	0/0:13,1:14:7.40:0,7,322	0/0:24,0:24:63.03:0,63,577	0/0:31,0:31:84.04:0,84,769	0/0:14,0:14:39.02:0,39,357
chr10	85120427	.	C	CACATATATACAT	3625.25	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=-0.760;DP=647;FS=0.000;HRun=0;HaplotypeScore=218.6913;InbreedingCoeff=0.7316;MQ=56.48;MQ0=2;MQRankSum=-6.646;QD=18.69;ReadPosRankSum=-3.512;VQSLOD=1.3773;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:33.08:0,33,721	1/1:2,6:9:9.03:393,9,0	0/1:19,0:15:10.87:11,0,134	0/0:15,0:6:3.57:0,4,48	0/0:29,0:29:66.18:0,66,1599	0/0:34,0:34:73.80:0,74,2319	0/0:23,0:23:37.66:0,38,900	0/0:29,0:29:12.04:0,12,212	1/1:8,13:22:6.02:350,6,0	1/1:11,19:29:27.08:981,27,0	1/1:17,20:44:14.52:661,15,0	0/0:21,0:21:35.90:0,36,1111	0/0:20,0:20:36.11:0,36,922	0/0:20,0:20:45.15:0,45,1350	1/1:6,16:24:15.05:797,15,0	0/0:8,0:8:21.07:0,21,614	1/1:15,2:17:15.05:386,15,0	0/0:16,0:16:30.07:0,30,737	0/0:7,0:7:9.03:0,9,185	0/0:36,0:36:63.20:0,63,1859	0/0:20,0:20:42.11:0,42,1096	0/0:30,0:30:60.21:0,60,1737	0/0:26,0:26:48.16:0,48,1414	0/0:17,0:17:30.10:0,30,865	0/0:30,0:30:57.20:0,57,1629	0/1:29,0:29:46.59:47,0,1357	0/0:17,0:17:37.35:0,37,1009	0/0:33,0:33:69.15:0,69,1863
chr10	85120979	.	AG	A	1069.45	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.133;DP=688;FS=1.312;HRun=5;HaplotypeScore=64.4005;InbreedingCoeff=0.9957;MQ=90.33;MQ0=0;MQRankSum=-3.787;QD=26.08;ReadPosRankSum=1.026;VQSLOD=3.3608;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,1690	0/0:6,0:6:18.06:0,18,246	0/0:25,1:26:51.05:0,51,872	0/0:29,0:29:43.42:0,43,742	0/0:31,0:31:87.27:0,87,1170	0/0:26,0:26:75.23:0,75,1008	1/1:0,19:19:48.14:545,48,0	0/0:41,0:41:99:0,114,1559	0/0:14,0:14:39.13:0,39,533	0/0:30,0:30:90.27:0,90,1189	0/0:14,0:14:39.11:0,39,516	0/0:21,0:21:54.17:0,54,722	0/0:23,0:23:69.23:0,69,944	0/0:13,0:13:36.11:0,36,477	0/0:37,0:37:99:0,111,1517	0/0:33,0:33:93.30:0,93,1258	0/0:16,0:16:45.15:0,45,616	1/1:2,20:22:57.16:647,57,0	0/0:20,0:20:54.14:0,54,715	0/0:28,0:28:81.27:0,81,1105	0/0:29,0:29:81.26:0,81,1092	0/0:18,0:18:54.18:0,54,738	0/0:18,0:18:48.16:0,48,656	0/0:21,0:21:60.20:0,60,821	0/0:16,0:16:45.13:0,45,597	0/0:34,0:34:99:0,102,1358	0/0:30,0:30:90.30:0,90,1230	0/0:28,0:28:84.25:0,84,1115
chr10	85121327	.	CT	C	156.91	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=3.001;DP=388;FS=5.635;HRun=1;HaplotypeScore=48.4646;InbreedingCoeff=0.5557;MQ=73.69;MQ0=22;MQRankSum=-0.669;QD=7.13;ReadPosRankSum=-0.185;VQSLOD=0.5546;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:38.08:0,38,331	0/0:3,0:3:8.49:0,8,49	0/0:57,2:23:13.52:0,14,287	0/0:51,2:12:11.88:0,12,124	0/0:9,0:9:2.81:0,3,125	0/0:10,0:10:29.94:0,30,258	1/1:7,3:10:29.87:240,30,0	0/0:22,2:24:59.99:0,60,537	0/0:12,0:12:11.34:0,11,187	0/0:16,0:16:44.83:0,45,405	0/0:6,0:6:14.90:0,15,114	0/0:7,0:7:20.98:0,21,176	0/0:6,0:6:17.99:0,18,161	0/0:5,0:5:11.98:0,12,99	0/0:14,0:13:35.24:0,35,271	0/0:5,0:5:11.99:0,12,100	0/0:15,0:15:38.74:0,39,292	1/1:2,0:2:3.45:22,3,0	0/1:10,0:9:8.74:9,0,139	0/0:11,0:11:23.34:0,23,184	0/0:8,0:8:14.37:0,14,147	0/0:3,0:3:8.97:0,9,72	0/0:10,0:10:20.70:0,21,158	0/0:5,0:5:12.46:0,12,101	0/0:10,0:10:24.01:0,24,233	0/0:10,0:9:27.03:0,27,253	0/0:12,0:12:18.22:0,18,210	0/0:26,0:23:35.18:0,35,263
chr10	85121379	.	T	TC	2214.15	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-4.745;DP=356;FS=4.189;HRun=4;HaplotypeScore=43.2230;InbreedingCoeff=0.9674;MQ=73.69;MQ0=9;MQRankSum=-1.505;QD=29.92;ReadPosRankSum=1.960;VQSLOD=3.5385;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.15:0,51,578	1/1:0,8:8:24.08:328,24,0	0/0:32,0:21:26.87:0,27,299	0/0:35,0:15:8.93:0,9,150	0/0:19,0:19:51.14:0,51,576	0/0:11,0:11:33.09:0,33,374	0/0:16,0:16:39.11:0,39,442	0/0:12,0:12:33.09:0,33,373	1/1:1,11:12:30.10:406,30,0	1/1:1,15:16:45.14:597,45,0	1/1:3,6:9:18.06:246,18,0	0/0:8,0:8:24.05:0,24,261	0/0:4,0:4:12.03:0,12,136	0/0:7,0:7:21.04:0,21,226	1/1:1,10:11:23.97:303,24,0	0/0:7,0:7:21.06:0,21,237	1/1:2,16:18:39.12:521,39,0	0/0:5,0:5:15.04:0,15,170	0/0:10,0:10:21.06:0,21,238	0/0:14,0:14:39.11:0,39,442	0/0:10,0:10:27.08:0,27,305	0/0:11,0:11:33.09:0,33,374	0/0:9,0:9:24.05:0,24,263	0/0:5,0:5:14.98:0,15,154	0/0:10,0:10:27.07:0,27,300	0/0:15,0:15:45.13:0,45,510	0/0:13,0:13:39.11:0,39,442	0/0:7,0:7:18.05:0,18,202
chr10	85121547	.	T	TTTTGTTTGTTTG	8793.02	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=9.300;DP=525;FS=10.920;HRun=0;HaplotypeScore=189.1908;InbreedingCoeff=0.2710;MQ=66.97;MQ0=2;MQRankSum=-10.977;QD=32.69;ReadPosRankSum=-2.368;VQSLOD=3.3488;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:93.80:208,0,94	0/1:6,0:6:33:162,0,33	0/0:25,0:20:35.06:0,35,796	0/0:24,0:22:41.75:0,42,712	0/0:24,0:24:65.90:0,66,1931	0/0:16,0:16:47.94:0,48,1373	0/1:15,0:15:95.57:96,0,211	0/1:30,0:30:87.64:88,0,536	0/1:19,0:19:99:624,0,111	0/1:26,0:26:37.93:704,0,38	0/1:12,0:12:68.94:289,0,69	0/0:10,0:9:27.08:0,27,769	0/0:11,0:11:27.09:0,27,940	0/0:7,0:7:21.05:0,21,551	0/1:27,0:27:3.93:843,0,4	1/1:3,7:12:8.86:267,9,0	0/1:20,0:20:99:260,0,157	0/0:12,0:12:2.16:0,2,91	1/1:7,13:24:61.61:1604,62,0	1/1:6,20:28:53.98:2455,54,0	1/1:8,0:7:15.36:225,15,0	0/0:21,0:21:63.12:0,63,1740	0/0:18,0:18:54.14:0,54,1691	0/0:27,0:27:61.19:0,61,2295	0/0:16,0:16:45.11:0,45,1373	0/0:27,0:27:14.33:0,14,2117	1/1:8,13:23:33.07:968,33,0	0/0:18,0:18:50.91:0,51,1206
chr10	85121563	.	G	GT	164.20	PASS	AB=0.882;AC=2;AF=0.036;AN=56;BaseQRankSum=11.942;DP=533;FS=2.550;HRun=3;HaplotypeScore=112.8676;InbreedingCoeff=-0.0411;MQ=61.37;MQ0=1;MQRankSum=-9.295;QD=2.99;ReadPosRankSum=7.104;VQSLOD=-0.0039;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:16.60:0,17,116	0/0:6,0:6:9.39:0,9,111	0/0:24,0:19:45.39:0,45,500	0/0:25,0:23:20.53:0,21,330	0/0:22,0:22:63.19:0,63,755	0/0:17,0:17:51.16:0,51,609	0/0:12,0:12:14.62:0,15,98	0/1:20,9:29:99:238,0,343	0/0:16,0:16:7.37:0,7,177	0/0:29,0:29:51.99:0,52,598	0/0:14,0:14:25.44:0,25,313	0/0:8,0:8:24.07:0,24,288	0/0:11,0:11:33.10:0,33,396	0/0:12,0:12:36.09:0,36,413	0/0:26,0:26:16.50:0,17,284	0/0:12,0:12:15.91:0,16,191	0/0:18,0:18:42.37:0,42,451	0/0:14,0:14:11.94:0,12,111	0/0:25,0:24:54.10:0,54,716	0/1:26,0:26:4.69:5,0,202	0/0:10,0:9:18.05:0,18,206	0/0:20,0:20:54.16:0,54,639	0/0:19,0:19:54.16:0,54,643	0/0:28,0:28:80.99:0,81,968	0/0:22,0:22:66.15:0,66,753	0/0:29,0:29:80.12:0,80,960	0/0:20,0:20:19.38:0,19,307	0/0:15,0:15:33.97:0,34,386
chr10	85121567	.	G	GTTTGTTTTT	9295.82	PASS	AB=0.994;AC=20;AF=0.357;AN=56;BaseQRankSum=10.946;DP=530;FS=10.485;HRun=0;HaplotypeScore=157.9570;InbreedingCoeff=0.0819;MQ=62.63;MQ0=1;MQRankSum=-12.818;QD=29.89;ReadPosRankSum=4.566;VQSLOD=3.9464;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:27:18.16:782,18,0	0/1:6,0:6:27:261,0,27	0/0:23,0:19:40.31:0,40,745	0/0:23,0:21:29.75:0,30,422	0/0:22,0:22:63.19:0,63,1703	0/0:18,0:18:46.88:0,47,1233	1/1:12,0:12:18.06:375,18,0	1/1:27,0:27:71.03:1329,71,0	0/1:16,0:16:7.84:845,0,8	0/1:29,0:29:99:1053,0,136	0/1:13,0:13:99:488,0,186	0/0:8,0:8:21.07:0,21,473	0/0:11,0:11:33.11:0,33,888	0/0:12,0:12:30.10:0,30,611	0/1:25,0:25:32.78:1128,0,33	0/1:11,0:12:95.93:107,0,96	0/1:20,0:20:95.41:526,0,95	1/1:14,0:15:9.65:133,10,0	0/1:25,0:24:99:501,0,427	0/1:27,0:27:75.25:1291,0,75	0/1:9,0:8:44.67:45,0,163	0/0:20,0:20:60.09:0,60,1410	0/0:18,0:18:51.14:0,51,1152	0/0:28,0:28:75.14:0,75,1868	0/0:23,0:23:69.20:0,69,1404	0/1:27,0:27:4.79:5,0,1719	0/1:21,0:21:30.20:428,0,30	0/0:12,0:13:39.08:0,39,838
chr10	85121568	.	T	TTTGTTTG	9136.19	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=12.500;DP=530;FS=2.711;HRun=0;HaplotypeScore=140.5005;InbreedingCoeff=0.2100;MQ=62.63;MQ0=1;MQRankSum=-12.272;QD=29.28;ReadPosRankSum=5.135;VQSLOD=4.6859;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:1.05:351,0,1	1/1:6,0:6:0.53:321,1,0	0/0:23,0:19:39.77:0,40,655	0/0:23,0:21:27.36:0,27,379	0/0:21,0:21:63.21:0,63,1501	0/0:19,0:19:46.94:0,47,1100	1/1:1,10:13:15.05:541,15,0	1/1:28,0:28:2.72:352,3,0	1/1:16,0:16:11.35:1024,11,0	0/1:30,0:30:12.18:1382,0,12	0/1:13,0:13:49.42:590,0,49	0/0:9,0:9:21.06:0,21,446	0/0:11,0:11:33.11:0,33,765	0/0:12,0:12:30.10:0,30,543	1/1:25,0:25:26.81:1403,27,0	0/1:12,0:12:72.24:90,0,72	0/1:20,0:20:22.50:790,0,22	1/1:2,10:15:12.04:256,12,0	0/1:25,0:24:99:461,0,327	0/1:27,0:27:57.10:1076,0,57	0/1:10,0:9:98.07:98,0,124	0/0:20,0:20:60.20:0,60,1302	0/0:17,0:17:51.15:0,51,1094	0/0:27,0:27:74.81:0,75,1713	0/0:23,0:23:69.22:0,69,1280	0/1:27,0:27:18.02:18,0,1536	0/1:22,0:22:25.85:383,0,26	0/0:13,0:13:39.13:0,39,804
chr10	85121570	.	T	TG	1233.28	PASS	AB=0.865;AC=12;AF=0.214;AN=56;BaseQRankSum=12.781;DP=531;FS=7.171;HRun=0;HaplotypeScore=109.4671;InbreedingCoeff=-0.1320;MQ=64.37;MQ0=1;MQRankSum=-11.698;QD=5.68;ReadPosRankSum=3.179;VQSLOD=2.5864;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:40.40:41,0,40	1/1:4,2:6:2.12:76,2,0	0/0:25,0:21:33.45:0,33,498	0/0:20,0:19:29.81:0,30,353	0/0:21,0:21:63.20:0,63,864	0/0:19,0:19:51.71:0,52,713	0/1:13,0:13:24.16:35,0,24	0/1:27,0:27:64.20:231,0,64	0/1:8,9:17:24.13:183,0,24	0/1:20,10:30:62.93:264,0,63	0/1:9,4:13:20.47:106,0,20	0/0:8,0:8:24.07:0,24,306	0/0:11,0:11:33.11:0,33,460	0/0:11,0:11:30.10:0,30,419	0/1:12,14:26:29.09:261,0,29	0/0:12,0:12:7.30:0,7,192	0/1:16,4:20:20.91:155,0,21	0/1:13,0:13:12.66:13,0,13	0/0:25,0:24:23.37:0,23,606	0/1:29,0:29:16.15:16,0,300	0/0:10,0:9:2.48:0,2,173	0/0:20,0:20:60.12:0,60,796	0/0:17,0:17:51.14:0,51,662	0/0:27,0:27:75.21:0,75,1012	0/0:24,0:24:69.22:0,69,948	0/0:27,1:28:63.22:0,63,997	0/0:22,0:22:17.19:0,17,354	0/0:13,0:13:25.33:0,25,488
chr10	85121571	.	T	TTTGTTTG	6933.13	PASS	AB=0.947;AC=19;AF=0.339;AN=56;BaseQRankSum=12.816;DP=536;FS=5.418;HRun=0;HaplotypeScore=148.7787;InbreedingCoeff=0.0040;MQ=64.30;MQ0=1;MQRankSum=-12.142;QD=21.73;ReadPosRankSum=3.721;VQSLOD=4.3317;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:11.42:222,0,11	0/1:4,2:6:3.85:274,0,4	0/0:24,0:20:41.26:0,41,803	0/0:20,0:18:15.34:0,15,495	0/0:22,0:22:60.20:0,60,1494	0/0:19,0:19:54.17:0,54,1229	0/1:13,0:13:23.06:156,0,23	0/1:26,0:26:67.42:67,0,162	1/1:9,8:17:47.85:1094,48,0	1/1:21,8:30:18.74:1305,19,0	0/1:9,4:13:24.63:515,0,25	0/0:8,0:8:24.06:0,24,476	0/0:11,0:11:33.11:0,33,839	0/0:12,0:12:30.10:0,30,661	1/1:15,12:27:30.52:1379,31,0	0/1:13,0:13:37.69:38,0,246	0/1:16,4:20:14.73:642,0,15	0/1:16,0:16:37.09:85,0,37	0/1:25,0:24:99:205,0,772	0/1:29,0:29:99:702,0,248	0/1:10,0:9:36.66:37,0,263	0/0:20,0:20:60.17:0,60,1329	0/0:17,0:17:48.14:0,48,1052	0/0:27,0:27:77.67:0,78,1762	0/0:24,0:24:69.22:0,69,1475	0/1:28,1:29:16.93:17,0,1603	0/1:22,0:22:99:195,0,233	0/0:13,0:13:39.10:0,39,768
chr10	85123030	.	C	CTAAG	12768.84	PASS	AB=0.960;AC=16;AF=0.286;AN=56;BaseQRankSum=-14.323;DP=687;FS=4.988;HRun=0;HaplotypeScore=119.6169;InbreedingCoeff=0.8244;MQ=74.68;MQ0=0;MQRankSum=-3.275;QD=52.55;ReadPosRankSum=1.961;VQSLOD=6.1805;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,144,2657	1/1:1,8:9:24.08:598,24,0	0/0:22,0:22:57.16:0,57,970	0/0:21,0:18:51.12:0,51,830	0/0:28,0:28:81.28:0,81,1501	0/0:20,0:20:54.19:0,54,998	1/1:5,18:24:54.19:1426,54,0	0/0:13,0:13:39.13:0,39,720	1/1:4,29:36:90.30:2356,90,0	1/1:3,25:29:84.26:2072,84,0	1/1:3,23:26:75.26:1888,75,0	0/0:22,0:22:63.17:0,63,1140	0/0:22,0:22:66.23:0,66,1226	0/0:17,0:17:51.17:0,51,941	1/1:1,26:27:75.26:1998,75,0	0/1:18,1:19:31.88:32,0,750	1/1:6,33:40:90.31:2336,90,0	0/0:28,0:28:78.27:0,78,1442	0/0:27,0:27:69.24:0,69,1266	0/0:16,0:16:30.08:0,30,503	0/0:22,0:22:54.17:0,54,977	0/0:30,0:30:87.27:0,87,1551	0/0:17,0:17:48.14:0,48,855	0/0:29,0:29:75.26:0,75,1391	0/0:20,0:20:57.20:0,57,1061	0/1:32,1:33:63.55:64,0,1579	0/0:21,0:21:47.96:0,48,863	0/0:11,0:11:27.09:0,27,493
chr10	85123051	.	A	AAAAAC	8403.52	PASS	AB=0.773;AC=14;AF=0.250;AN=56;BaseQRankSum=-13.215;DP=726;FS=0.389;HRun=0;HaplotypeScore=153.9575;InbreedingCoeff=0.7920;MQ=60.62;MQ0=1;MQRankSum=0.302;QD=37.85;ReadPosRankSum=-1.226;VQSLOD=4.0661;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,41:55:92.91:2563,93,0	0/0:13,0:13:36.11:0,36,595	0/0:22,0:17:17.79:0,18,270	0/1:24,0:15:28.09:28,0,116	0/0:31,0:31:66.23:0,66,1220	0/0:17,0:17:42.14:0,42,778	0/0:24,0:24:42.10:0,42,713	1/1:6,17:25:7.79:1135,8,0	0/0:37,0:37:87.28:0,87,1554	0/0:36,0:36:81.27:0,81,1468	0/0:21,0:21:45.13:0,45,776	0/0:27,0:27:51.09:0,51,854	0/0:24,0:24:57.18:0,57,977	0/0:21,0:21:48.15:0,48,854	0/0:28,0:28:52.60:0,53,984	0/1:3,15:18:22.65:819,0,23	0/0:32,0:32:60.14:0,60,1037	0/0:30,0:30:69.22:0,69,1185	1/1:15,14:32:60.12:1309,60,0	1/1:2,14:17:36.12:851,36,0	1/1:9,15:26:24.08:681,24,0	0/0:27,0:27:51.17:0,51,918	0/0:18,0:18:36.07:0,36,637	0/0:28,0:28:69.22:0,69,1221	0/0:24,0:24:45.15:0,45,790	0/0:35,0:35:90.30:0,90,1618	1/1:6,15:24:36.07:1019,36,0	0/0:9,0:9:18.06:0,18,302
chr10	85123147	.	A	ACACACGCTGGGCACTG	2575.55	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-5.466;DP=807;FS=2.292;HRun=0;HaplotypeScore=322.1281;InbreedingCoeff=0.8420;MQ=83.04;MQ0=0;MQRankSum=-4.498;QD=19.51;ReadPosRankSum=-1.093;VQSLOD=1.7228;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,99,3563	0/0:15,0:15:33.11:0,33,1331	0/0:26,0:26:31.03:0,31,482	0/0:25,0:25:3.76:0,4,130	0/0:31,0:31:66.23:0,66,2387	0/0:27,0:27:54.17:0,54,1941	0/0:29,0:29:60.21:0,60,1986	0/0:14,0:14:15.03:0,15,225	0/0:40,0:40:87.28:0,87,3229	0/0:31,0:31:57.14:0,57,1881	0/0:22,0:22:45.15:0,45,1661	1/1:19,12:31:8.86:683,9,0	1/1:14,4:26:6.02:455,6,0	1/1:19,19:40:15.05:1122,15,0	0/0:23,0:23:54.17:0,54,1880	0/0:23,0:23:42.14:0,42,1498	0/0:46,0:46:99:0,105,4209	0/0:26,0:26:66.15:0,66,2079	0/0:32,0:32:54.17:0,54,1807	0/0:26,0:26:39.12:0,39,1368	0/0:52,0:52:99:0,111,3792	1/1:21,10:35:5.82:454,6,0	0/0:25,0:25:51.13:0,51,2007	0/0:48,0:48:99:0,105,3816	0/0:17,0:16:36.12:0,36,1231	0/0:24,0:24:54.18:0,54,1765	0/0:10,0:10:6.02:0,6,265	0/0:19,0:19:42.14:0,42,1589
chr10	85123674	.	C	CTT	7921.28	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=10.761;DP=667;FS=17.878;HRun=9;HaplotypeScore=109.8499;InbreedingCoeff=0.9935;MQ=76.38;MQ0=1;MQRankSum=-1.763;QD=17.41;ReadPosRankSum=1.371;VQSLOD=1.9461;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:37:78.20:281,78,0	1/1:2,4:6:12.04:185,12,0	0/0:23,0:23:29.90:0,30,296	0/0:14,0:14:30.05:0,30,309	0/0:22,0:22:51.07:0,51,543	0/0:20,0:21:56.83:0,57,571	1/1:3,23:26:19.24:707,19,0	1/1:7,0:30:56.45:193,56,0	1/1:2,25:27:57.19:878,57,0	1/1:7,23:32:75.21:1075,75,0	1/1:2,18:21:41.69:491,42,0	1/1:2,0:29:59.76:205,60,0	1/1:6,0:25:39.93:137,40,0	1/1:1,0:14:27.45:94,27,0	1/1:1,27:28:63.21:970,63,0	1/1:1,0:27:62.38:214,62,0	1/1:0,26:26:66.22:1016,66,0	1/1:1,20:22:53.67:794,54,0	1/1:2,0:18:42.27:147,42,0	1/1:1,0:14:29.94:103,30,0	1/1:4,0:16:24.95:86,25,0	1/1:0,0:24:49.31:170,49,0	0/0:20,0:20:54.11:0,54,566	0/0:25,0:25:72.15:0,72,758	0/0:25,0:25:64.86:0,65,692	0/0:42,1:43:71.06:0,71,1159	1/1:4,0:32:31.22:177,31,0	0/0:19,0:19:48.08:0,48,501
chr10	85124280	.	TTGTG	T	2200.27	PASS	AB=0.667;AC=15;AF=0.278;AN=54;BaseQRankSum=0.832;DP=401;FS=1.407;HRun=0;HaplotypeScore=80.7825;InbreedingCoeff=0.7402;MQ=55.14;MQ0=10;MQRankSum=4.083;QD=18.34;ReadPosRankSum=2.338;VQSLOD=3.0622;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:14.73:0,15,221	1/1:1,5:6:12.04:191,12,0	./.	0/0:16,0:5:3.01:0,3,40	0/0:25,0:25:48.13:0,48,1052	0/0:13,0:15:35.58:0,36,663	1/1:4,7:11:18.06:287,18,0	0/0:31,0:31:24.08:0,24,451	1/1:1,7:9:18.05:267,18,0	1/1:11,10:21:24.02:354,24,0	1/1:5,8:14:14.96:239,15,0	0/0:7,0:14:12.04:0,12,228	0/0:3,0:8:12.04:0,12,209	0/0:3,0:8:9.03:0,9,157	1/1:5,6:10:16.11:283,16,0	0/0:8,0:8:17.65:0,18,261	1/1:9,20:29:48.16:744,48,0	0/1:9,1:18:21.90:22,0,75	0/0:10,0:9:8.93:0,9,90	0/0:17,0:17:3.90:0,4,52	0/0:5,0:5:0.89:0,1,2	0/0:5,0:6:6.01:0,6,77	0/0:4,0:4:9.03:0,9,215	0/0:7,0:6:17.85:0,18,372	0/0:12,0:14:23.55:0,24,422	0/0:18,0:20:16.87:0,17,691	0/0:12,0:12:6:0,6,87	0/0:26,0:26:50.64:0,51,1068
chr10	85124292	.	G	GTGTGTGTGTA	2333.95	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-3.150;DP=452;FS=6.619;HRun=0;HaplotypeScore=135.0750;InbreedingCoeff=0.5725;MQ=53.32;MQ0=16;MQRankSum=-1.976;QD=19.61;ReadPosRankSum=-1.263;VQSLOD=2.3509;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:29:6.67:501,7,0	0/0:7,0:7:18.03:0,18,332	0/0:25,0:5:11.81:0,12,88	0/0:25,0:6:11.82:0,12,82	0/0:24,0:24:57.07:0,57,1190	0/0:17,0:17:42.06:0,42,906	0/0:11,0:11:24:0,24,450	0/1:25,0:24:13.06:377,0,13	0/0:12,0:12:29.99:0,30,532	0/0:22,0:22:57:0,57,767	0/0:14,0:14:23.70:0,24,488	0/0:13,0:13:1.50:0,2,41	0/1:7,0:7:1.11:1,0,31	1/1:7,0:7:2.66:7,3,0	0/0:13,0:11:29.93:0,30,530	1/1:1,7:9:18.06:793,18,0	0/0:34,0:33:75.12:0,75,1484	0/0:21,0:21:1.26:0,1,725	1/1:7,5:11:20.72:605,21,0	1/1:0,16:19:5.95:172,6,0	0/1:9,0:8:2.08:34,0,2	0/0:7,0:7:4.01:0,4,47	0/0:6,0:6:10.75:0,11,288	0/0:10,0:9:27.04:0,27,621	0/0:16,0:15:39.03:0,39,570	0/0:17,0:17:48.10:0,48,910	0/0:5,7:14:6.03:0,6,36	0/0:25,0:25:63.11:0,63,1545
chr10	85124564	.	G	GT	3226.07	PASS	AB=0.929;AC=25;AF=0.446;AN=56;BaseQRankSum=-5.789;DP=463;FS=3.621;HRun=9;HaplotypeScore=57.0723;InbreedingCoeff=0.9231;MQ=77.97;MQ0=2;MQRankSum=0.456;QD=19.55;ReadPosRankSum=1.802;VQSLOD=4.2794;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:54.35:0,54,493	1/1:1,3:4:6.02:66,6,0	0/0:30,0:16:29.28:0,29,236	0/0:36,0:23:28.22:0,28,273	0/0:23,0:23:62.96:0,63,541	0/0:21,0:21:56.98:0,57,494	1/1:1,8:9:21.06:232,21,0	0/0:38,0:38:86.95:0,87,752	1/1:2,12:14:39.11:431,39,0	1/1:5,15:20:45.10:482,45,0	1/1:2,11:13:33.08:357,33,0	1/1:1,0:5:11.40:57,11,0	1/1:2,1:12:22.89:133,23,0	1/1:0,1:7:17.22:94,17,0	1/1:3,12:16:32.92:346,33,0	0/0:17,0:17:41.98:0,42,365	1/1:1,23:24:63.17:697,63,0	1/1:5,16:21:44.50:453,44,0	0/0:25,0:23:59.90:0,60,503	0/0:15,0:15:41.98:0,42,365	0/0:6,0:6:15:0,15,130	1/1:0,0:7:19.92:100,20,0	0/0:2,0:2:6:0,6,52	0/0:12,0:12:26.97:0,27,229	0/0:13,0:13:32.96:0,33,281	0/1:12,1:13:0.20:0,0,227	0/0:19,0:19:44.83:0,45,391	0/0:15,0:15:32.98:0,33,286
chr10	85124732	.	C	CA	9752.84	PASS	AB=0.579;AC=35;AF=0.648;AN=54;BaseQRankSum=11.521;DP=648;FS=2.360;HRun=3;HaplotypeScore=91.4410;InbreedingCoeff=0.8611;MQ=37.69;MQ0=133;MQRankSum=-1.421;QD=23.06;ReadPosRankSum=-1.142;VQSLOD=3.8872;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,18:20:39.13:546,39,0	1/1:2,8:7:18.06:252,18,0	./.	0/0:4,0:4:6.02:0,6,72	0/0:41,0:26:60.18:0,60,720	0/0:27,0:26:63.18:0,63,744	1/1:10,12:12:33.10:446,33,0	1/1:12,14:18:42.14:583,42,0	0/1:6,16:17:5.94:304,0,6	1/1:15,24:30:78.22:1046,78,0	1/1:7,12:12:30.10:419,30,0	1/1:5,25:25:57.19:797,57,0	1/1:3,14:15:30.10:420,30,0	1/1:2,22:21:48.16:671,48,0	1/1:3,10:10:27.02:335,27,0	1/1:2,20:20:51.17:713,51,0	1/1:15,17:20:45.15:630,45,0	0/0:26,0:12:17.49:0,17,131	1/1:5,12:15:42.13:564,42,0	1/1:4,20:21:54.18:755,54,0	1/1:26,13:16:6.23:510,6,0	1/1:9,11:10:24.08:336,24,0	0/0:24,0:17:45.14:0,45,539	0/0:30,0:16:33.10:0,33,396	0/0:20,0:16:30.09:0,30,360	0/0:33,0:29:87.27:0,87,1043	1/1:4,15:15:0.21:426,0,0	0/0:16,0:12:33.10:0,33,396
chr10	85125010	.	GA	G	5118.01	PASS	AB=0.830;AC=24;AF=0.429;AN=56;BaseQRankSum=13.747;DP=699;FS=2.331;HRun=4;HaplotypeScore=65.3340;InbreedingCoeff=0.8966;MQ=38.71;MQ0=169;MQRankSum=0.275;QD=15.10;ReadPosRankSum=1.891;VQSLOD=3.9805;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,40:43:72.22:863,72,0	0/0:12,0:7:18.01:0,18,232	0/1:10,0:1:0:0,0,0	0/0:10,0:1:3.01:0,3,42	0/0:26,0:17:48.16:0,48,672	0/0:23,0:18:45.15:0,45,629	0/0:26,0:22:57.15:0,57,770	1/1:4,23:18:48.11:559,48,0	0/0:25,0:21:51.13:0,51,692	0/0:36,0:21:60.19:0,60,822	0/0:31,0:18:42.14:0,42,586	1/1:7,20:11:21.06:252,21,0	1/1:5,12:11:18.06:216,18,0	1/1:6,30:22:30.09:360,30,0	0/0:29,0:23:60.16:0,60,817	1/1:5,13:13:36.11:431,36,0	0/0:41,0:29:66.22:0,66,924	1/1:11,16:17:36.11:432,36,0	1/1:7,16:14:36.11:431,36,0	1/1:5,10:11:30.09:360,30,0	1/1:11,20:22:18.31:642,18,0	1/1:12,12:9:15.05:180,15,0	0/0:18,0:9:21.07:0,21,294	0/0:26,0:21:42.08:0,42,549	0/0:16,0:12:27.05:0,27,356	0/0:27,0:19:51.13:0,51,692	0/1:15,16:20:2.55:392,0,3	0/0:14,0:9:18.06:0,18,252
chr10	85125171	.	CTTTCTTTTTTTTT	C	2108.27	PASS	AB=0.932;AC=22;AF=0.407;AN=54;BaseQRankSum=-0.594;DP=398;FS=5.764;HRun=0;HaplotypeScore=140.8476;InbreedingCoeff=0.5101;MQ=49.78;MQ0=14;MQRankSum=-1.187;QD=12.26;ReadPosRankSum=3.701;VQSLOD=1.8507;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:14:25.09:69,0,25	1/1:9,1:10:9.02:156,9,0	0/0:27,0:13:4.35:0,4,46	0/0:19,0:3:3.15:0,3,31	0/0:14,0:13:20.09:0,20,719	0/0:13,0:13:19.81:0,20,751	1/1:18,0:18:5.18:194,5,0	0/0:34,0:28:16.17:0,16,193	1/1:8,0:8:14.92:131,15,0	0/1:14,1:15:99:251,0,111	1/1:6,1:7:9.02:109,9,0	1/1:11,0:10:6.48:30,6,0	0/0:7,0:7:3.92:0,4,15	./.	1/1:10,1:11:2.71:236,3,0	0/1:7,0:7:27.73:71,0,28	1/1:21,5:24:20.72:670,21,0	1/1:15,0:15:19.69:255,20,0	0/0:13,0:13:17.28:0,17,140	0/1:21,0:20:69.12:69,0,202	0/0:10,0:9:9:0,9,92	1/1:8,0:8:9.02:54,9,0	0/0:10,0:10:11.94:0,12,108	0/0:9,0:9:18.40:0,18,455	0/0:9,0:9:18:0,18,532	0/0:18,0:18:39.93:0,40,1505	0/0:15,0:15:8.94:0,9,71	0/0:17,0:17:26.01:0,26,534
chr10	85125175	.	CT	C	723.85	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=-2.423;DP=396;FS=2.045;HRun=12;HaplotypeScore=68.8203;InbreedingCoeff=0.5837;MQ=48.75;MQ0=20;MQRankSum=0.162;QD=5.48;ReadPosRankSum=0.352;VQSLOD=2.0478;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:14:9.91:14,0,10	0/0:5,0:10:1.13:0,1,11	0/0:28,0:13:6.27:0,6,44	0/0:20,0:3:8.80:0,9,55	0/0:14,0:12:24.34:0,24,222	0/0:15,0:15:24.01:0,24,183	0/0:9,0:16:23.93:0,24,121	1/1:14,14:23:16.20:275,16,0	0/0:7,0:9:16.09:0,16,78	0/0:9,0:12:15.75:0,16,84	0/0:4,0:7:4.44:0,4,16	0/0:9,0:8:14.85:0,15,93	0/0:7,0:7:4.23:0,4,25	./.	0/0:9,0:12:16.26:0,16,109	1/1:1,4:4:5.98:46,6,0	0/0:24,0:25:15.57:0,16,126	0/0:15,0:15:6.45:0,6,52	1/1:7,9:14:20.90:161,21,0	1/1:7,14:20:34.78:252,35,0	1/1:3,5:7:8.96:70,9,0	0/0:8,0:8:6.16:0,6,31	0/0:10,0:9:12.02:0,12,120	0/1:9,0:9:1.18:1,0,129	0/0:12,0:8:20.78:0,21,171	0/0:18,0:19:37.99:0,38,335	1/1:7,7:14:8.89:63,9,0	0/1:15,0:15:13.52:14,0,193
chr10	85125186	.	TTC	T	744.46	PASS	AB=1.000;AC=27;AF=0.500;AN=54;BaseQRankSum=2.911;DP=375;FS=4.330;HRun=0;HaplotypeScore=66.2753;InbreedingCoeff=0.0624;MQ=47.66;MQ0=26;MQRankSum=0.982;QD=3.09;ReadPosRankSum=-1.345;VQSLOD=1.3387;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:7:4.82:19,0,5	1/1:6,0:6:5.80:40,6,0	0/1:29,0:9:6.14:6,0,68	0/0:40,1:5:10.43:0,10,36	0/0:14,0:11:6.81:0,7,231	0/1:14,0:14:20.93:21,0,138	0/1:11,0:11:20.72:21,0,29	0/1:28,0:19:47.14:50,0,47	1/1:8,0:8:9.20:32,9,0	0/1:9,0:9:25.84:36,0,26	1/1:4,0:4:5.03:18,5,0	1/1:9,0:6:9.38:51,9,0	1/1:2,5:7:6.07:29,6,0	./.	0/1:11,0:11:15.71:66,0,16	0/1:7,0:6:14.16:20,0,14	1/1:23,0:21:3.13:154,3,0	1/1:14,0:14:28.19:211,28,0	0/1:15,0:11:10.23:10,0,37	0/1:16,0:15:13.64:49,0,14	0/0:7,0:5:7.36:0,7,26	1/1:5,0:5:10.13:62,10,0	0/0:7,0:6:11.82:0,12,116	0/0:11,0:11:8.13:0,8,126	0/0:12,0:8:13.83:0,14,138	0/0:25,0:24:41.14:0,41,496	0/0:8,0:8:0.67:0,1,8	0/1:15,0:15:18.77:19,0,225
chr10	85125190	.	T	TC	48.72	PASS	AB=0.890;AC=4;AF=0.074;AN=54;BaseQRankSum=1.356;DP=377;FS=2.474;HRun=0;HaplotypeScore=68.4226;InbreedingCoeff=-0.0330;MQ=44.53;MQ0=28;MQRankSum=0.315;QD=1.52;ReadPosRankSum=-1.603;VQSLOD=1.5531;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:8:15.48:0,15,110	0/0:5,0:5:7.85:0,8,30	0/0:28,0:9:19.36:0,19,166	0/0:44,0:6:3.20:0,3,51	0/0:16,0:13:29.23:0,29,291	0/0:15,0:15:32.87:0,33,292	0/0:11,0:11:28.57:0,29,170	0/0:28,0:18:44.31:0,44,423	0/0:7,0:7:13.39:0,13,55	0/0:8,0:8:19.36:0,19,130	0/1:4,0:4:6.07:6,0,14	0/1:9,0:6:24.87:35,0,25	0/0:7,0:7:6.86:0,7,54	./.	0/0:11,0:10:20.27:0,20,96	0/0:8,0:7:7.80:0,8,92	0/0:21,0:19:43.58:0,44,241	0/1:13,1:13:17.53:70,0,18	0/0:16,0:11:26.94:0,27,232	0/0:16,0:14:32.91:0,33,328	0/0:6,0:4:9.03:0,9,121	0/1:2,3:5:8.97:41,0,9	0/0:7,0:6:14.89:0,15,122	0/0:10,0:10:23.94:0,24,212	0/0:12,0:8:23.20:0,23,209	0/0:24,0:23:69.05:0,69,791	0/0:10,0:9:8.99:0,9,96	0/0:15,0:15:45.04:0,45,484
chr10	85125220	.	TTTTTTTC	T	959.20	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=3.281;DP=288;FS=17.307;HRun=0;HaplotypeScore=66.1948;InbreedingCoeff=0.4558;MQ=44.16;MQ0=24;MQRankSum=-3.281;QD=10.43;ReadPosRankSum=1.153;VQSLOD=0.4020;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:7:36.93:37,0,116	1/1:4,1:4:12:165,12,0	0/0:40,0:11:27.05:0,27,392	0/0:44,0:6:11.05:0,11,115	0/0:12,0:11:27.97:0,28,786	0/0:13,0:12:29.97:0,30,743	1/1:7,0:5:8.12:44,8,0	0/0:11,0:6:7.52:0,8,62	1/1:4,0:4:8.96:72,9,0	1/1:6,1:5:10.74:110,11,0	1/1:3,1:3:8.93:76,9,0	0/0:2,0:1:2.84:0,3,14	0/0:6,0:5:3.51:0,4,18	0/0:4,0:3:3:0,3,27	1/1:11,1:9:11.02:134,11,0	0/1:5,0:4:42.96:43,0,53	1/1:11,5:13:12.64:319,13,0	0/1:13,0:12:91.03:91,0,99	0/0:7,0:6:8.34:0,8,77	0/1:5,0:2:22.07:45,0,22	0/0:4,0:3:8.46:0,8,41	1/1:4,0:2:1.55:4,2,0	0/0:2,0:2:3:0,3,26	0/0:8,0:7:15.05:0,15,448	0/0:8,0:7:18.95:0,19,475	0/0:23,0:21:54.60:0,55,1044	0/0:5,0:4:2.88:0,3,45	0/0:7,0:7:18.06:0,18,656
chr10	85125495	.	GA	G	3070.87	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.301;DP=537;FS=2.829;HRun=10;HaplotypeScore=58.6672;InbreedingCoeff=0.9885;MQ=68.90;MQ0=0;MQRankSum=-1.948;QD=19.31;ReadPosRankSum=3.192;VQSLOD=4.6921;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,1:45:97.10:0,97,1266	1/1:1,8:9:20.99:182,21,0	0/0:17,1:15:26.07:0,26,258	0/0:21,2:20:9.03:0,9,236	0/0:20,0:20:51.12:0,51,550	0/0:17,0:17:48.10:0,48,508	1/1:2,17:19:35.99:313,36,0	0/0:20,0:22:65.82:0,66,675	1/1:1,17:18:47.99:417,48,0	1/1:3,17:21:53:441,53,0	1/1:4,10:14:29.99:260,30,0	0/0:15,0:15:42.10:0,42,456	0/0:11,0:11:33.07:0,33,356	0/0:12,0:12:30.08:0,30,332	1/1:2,13:16:41.03:345,41,0	0/0:18,1:19:25.07:0,25,490	1/1:5,31:36:89.96:781,90,0	1/1:4,22:26:36.30:540,36,0	0/0:17,0:17:47.96:0,48,512	0/0:19,0:19:39.10:0,39,424	0/0:18,0:18:54.12:0,54,581	0/0:13,0:13:27.03:0,27,285	0/0:12,0:12:27.07:0,27,298	0/0:14,0:14:39.11:0,39,431	0/0:14,0:14:36.10:0,36,398	0/0:30,1:31:43.17:0,43,695	0/0:20,0:20:48.13:0,48,531	0/0:17,0:17:51.12:0,51,555
chr10	85127101	.	AT	A	1548.21	PASS	AB=0.938;AC=18;AF=0.321;AN=56;BaseQRankSum=9.884;DP=356;FS=1.037;HRun=11;HaplotypeScore=45.7473;InbreedingCoeff=0.7264;MQ=59.13;MQ0=4;MQRankSum=0.864;QD=13.01;ReadPosRankSum=-0.327;VQSLOD=2.9707;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:57.12:0,57,592	0/0:7,0:7:15.04:0,15,159	0/0:12,0:8:9.01:0,9,87	0/0:8,0:5:4.56:0,5,16	0/0:22,0:22:51.11:0,51,534	0/0:21,0:21:54.12:0,54,563	0/0:8,0:8:18.05:0,18,191	1/1:10,16:30:56.62:453,57,0	0/0:8,0:8:15.04:0,15,160	0/0:10,1:10:2.41:0,2,221	0/0:15,0:15:36.09:0,36,380	0/1:5,0:5:2.78:3,0,66	0/0:8,0:8:15.04:0,15,157	0/0:6,0:6:18:0,18,176	0/0:3,0:3:9.01:0,9,89	1/1:0,8:8:23.91:188,24,0	0/0:35,1:36:65.19:0,65,855	1/1:2,13:15:32.69:266,33,0	1/1:4,14:18:41.82:338,42,0	1/1:2,8:10:20.94:168,21,0	1/1:0,1:1:2.99:23,3,0	1/1:4,0:4:5.72:28,6,0	0/0:9,0:9:18.05:0,18,191	0/0:3,0:3:6.02:0,6,64	0/1:12,2:14:16.10:16,0,247	0/0:16,0:16:48.11:0,48,505	1/1:0,12:12:32.88:258,33,0	0/0:17,0:17:42.01:0,42,417
chr10	85130441	.	G	GC	1112.70	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.461;DP=591;FS=1.425;HRun=6;HaplotypeScore=70.6488;InbreedingCoeff=0.9970;MQ=82.92;MQ0=0;MQRankSum=-4.386;QD=26.49;ReadPosRankSum=1.996;VQSLOD=4.0586;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,38:42:96.31:1208,96,0	0/0:10,0:10:24.05:0,24,245	0/0:27,0:26:54.64:0,55,673	0/0:22,0:22:53.69:0,54,480	0/0:24,0:24:57.12:0,57,581	0/0:22,0:22:54.08:0,54,540	0/0:23,0:23:63.11:0,63,633	0/0:23,0:23:60.14:0,60,612	0/0:18,0:18:45.06:0,45,448	0/0:18,0:18:51.10:0,51,513	0/0:15,0:15:45.10:0,45,459	0/0:26,0:26:72.16:0,72,734	0/0:23,0:23:63.09:0,63,625	0/0:16,0:16:45.07:0,45,449	0/0:15,0:15:39.05:0,39,387	0/0:18,0:18:51.12:0,51,520	0/0:23,0:23:63.11:0,63,633	0/0:23,0:23:66.15:0,66,673	0/0:15,0:15:30.06:0,30,306	0/0:20,0:20:51.11:0,51,520	0/0:23,0:23:60.11:0,60,605	0/0:23,0:23:63.14:0,63,642	0/0:19,0:19:48.10:0,48,489	0/0:27,0:27:60.13:0,60,612	0/0:19,0:19:45.10:0,45,459	0/0:26,0:26:66.10:0,66,650	0/0:20,0:20:54.03:0,54,528	0/0:11,0:11:33.08:0,33,337
chr10	85130968	.	A	AT	19124.20	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-15.723;DP=710;FS=3.440;HRun=1;HaplotypeScore=66.1980;InbreedingCoeff=1.0000;MQ=89.33;MQ0=0;MQRankSum=-5.781;QD=39.59;ReadPosRankSum=2.640;VQSLOD=5.6776;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,45:45:99:1933,129,0	1/1:0,14:14:42.14:629,42,0	0/0:30,0:30:89.98:0,90,1073	0/0:23,0:23:61.31:0,61,661	0/0:39,0:39:99:0,111,1393	0/0:24,0:24:69.19:0,69,865	1/1:0,25:25:75.25:1124,75,0	1/1:1,25:26:75.24:1097,75,0	1/1:3,23:26:57.19:854,57,0	1/1:0,28:28:84.22:1172,84,0	1/1:1,19:20:51.13:739,51,0	1/1:2,16:18:39.13:584,39,0	1/1:1,23:24:60.18:875,60,0	1/1:2,25:27:72.24:1079,72,0	1/1:1,20:21:60.20:899,60,0	1/1:2,20:22:51.17:764,51,0	1/1:1,25:26:66.22:989,66,0	1/1:1,21:22:51.17:764,51,0	1/1:0,22:22:66.19:938,66,0	1/1:2,25:27:75.14:1072,75,0	1/1:2,35:37:99:1507,102,0	1/1:1,22:23:63.21:936,63,0	0/0:26,0:26:78.24:0,78,997	0/0:31,0:31:93.27:0,93,1179	0/0:22,0:22:66.21:0,66,857	0/0:19,0:19:54.18:0,54,701	1/1:1,29:30:78.21:1169,78,0	0/0:13,0:13:39.11:0,39,491
chr10	85132979	.	CTTTCTTTCT	C	2949.47	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.528;DP=669;FS=6.452;HRun=0;HaplotypeScore=168.4381;InbreedingCoeff=0.9854;MQ=60.36;MQ0=13;MQRankSum=-9.423;QD=46.82;ReadPosRankSum=1.082;VQSLOD=3.1017;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:57.19:0,57,1763	0/0:7,0:7:18.06:0,18,553	0/0:56,0:18:23.28:0,23,391	0/0:43,0:10:18.49:0,18,262	0/0:17,0:17:39.11:0,39,1449	0/0:22,0:22:54.17:0,54,2101	0/0:19,0:18:33.11:0,33,995	0/0:32,0:32:60.15:0,60,2275	0/0:21,0:21:45.15:0,45,1415	0/0:14,0:13:36.11:0,36,1057	0/0:19,0:18:39.11:0,39,1155	1/1:1,11:12:18.06:482,18,0	1/1:3,19:22:48.16:1358,48,0	1/1:3,19:22:27.09:778,27,0	0/0:22,0:22:45.15:0,45,1510	0/0:26,0:26:69.24:0,69,3087	0/0:27,0:26:54.08:0,54,1692	0/0:19,0:19:39.13:0,39,1463	0/0:19,0:18:42.14:0,42,1351	0/0:30,0:30:78.24:0,78,3110	0/0:13,0:13:27.07:0,27,961	1/1:1,6:7:18.06:491,18,0	0/0:28,0:28:72.21:0,72,2968	0/0:33,0:33:87.22:0,87,3212	0/0:31,0:31:81.25:0,81,2950	0/0:34,0:34:92.51:0,93,3463	0/0:24,0:24:69.20:0,69,2694	0/0:9,0:9:15.05:0,15,527
chr10	85132996	.	CT	C	435.41	PASS	AB=0.991;AC=11;AF=0.196;AN=56;BaseQRankSum=7.313;DP=653;FS=5.400;HRun=10;HaplotypeScore=95.5301;InbreedingCoeff=0.3480;MQ=68.17;MQ0=12;MQRankSum=-5.502;QD=3.35;ReadPosRankSum=0.973;VQSLOD=0.4385;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:28:47.99:416,48,0	0/1:8,0:8:10.26:10,0,34	0/0:56,0:17:4.58:0,5,193	0/0:53,2:26:27.08:0,27,258	0/0:13,0:14:38.94:0,39,412	0/0:19,0:19:51.10:0,51,544	0/0:18,0:18:29.46:0,29,124	0/0:27,0:28:52.69:0,53,583	0/0:21,0:21:34.82:0,35,147	0/1:17,0:16:63.41:78,0,63	0/1:19,0:18:39.65:40,0,78	1/1:11,0:11:3.13:7,3,0	0/1:20,0:21:9.72:11,0,10	0/1:20,0:20:4.95:5,0,23	0/0:25,0:24:37.50:0,37,158	0/0:24,1:25:49.15:0,49,769	0/0:30,0:30:13.07:0,13,123	0/0:2,0:18:34.09:0,34,171	0/0:20,0:19:38.85:0,39,396	0/0:29,0:29:75.11:0,75,804	0/0:12,0:12:27.07:0,27,299	1/1:6,0:6:4.42:9,4,0	0/0:24,0:24:67.73:0,68,734	0/0:34,0:34:86.23:0,86,917	0/0:26,1:28:23.89:0,24,675	0/0:33,0:33:84.22:0,84,923	0/0:27,0:27:51.42:0,51,766	0/0:6,0:6:12.03:0,12,133
chr10	85132997	.	T	TTTC	5221.44	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-10.686;DP=665;FS=9.963;HRun=0;HaplotypeScore=104.6805;InbreedingCoeff=0.9899;MQ=68.19;MQ0=11;MQRankSum=3.544;QD=36.77;ReadPosRankSum=2.135;VQSLOD=5.2458;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:56.73:0,57,479	1/1:1,7:9:15.05:312,15,0	0/0:55,0:17:30.06:0,30,311	0/0:53,0:27:24.87:0,25,281	0/0:17,0:17:41.96:0,42,635	0/0:19,0:19:54.15:0,54,822	1/1:1,17:18:33.10:694,33,0	0/0:29,0:29:77.83:0,78,1059	1/1:2,19:21:39.06:820,39,0	1/1:0,17:16:48.11:796,48,0	1/1:1,18:19:39.11:775,39,0	0/0:12,0:12:14.63:0,15,93	0/0:21,0:21:48.08:0,48,376	0/0:20,0:20:28.82:0,29,246	1/1:3,24:26:42.13:882,42,0	0/0:25,0:25:75.25:0,75,1252	1/1:3,27:30:46.40:942,46,0	0/0:18,0:18:36.96:0,37,190	0/0:21,0:19:50.92:0,51,637	0/0:31,0:31:87.16:0,87,1288	0/0:12,0:12:33.09:0,33,490	0/0:6,0:6:16.80:0,17,132	0/0:24,0:24:70.74:0,71,1145	0/0:34,0:34:99:0,101,1427	0/0:29,0:29:80.65:0,81,1128	0/0:33,0:33:90.28:0,90,1438	0/0:28,0:28:55.26:0,55,1195	0/0:6,0:6:18.03:0,18,248
chr10	85133033	.	AGC	A	173.24	PASS	AB=0.788;AC=2;AF=0.036;AN=56;BaseQRankSum=6.472;DP=554;FS=2.055;HRun=0;HaplotypeScore=95.6041;InbreedingCoeff=-0.0380;MQ=75.02;MQ0=3;MQRankSum=3.577;QD=2.62;ReadPosRankSum=-2.917;VQSLOD=1.6749;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:43.05:0,43,1066	0/0:6,0:6:18.06:0,18,365	0/1:23,11:26:99:118,0,843	0/1:25,6:29:99:144,0,889	0/0:23,0:23:69.21:0,69,1360	0/0:14,0:14:42.14:0,42,834	0/0:15,0:15:39.13:0,39,756	0/0:26,0:26:78.26:0,78,1511	0/0:18,0:18:48.16:0,48,961	0/0:14,0:14:42.14:0,42,816	0/0:17,0:17:48.16:0,48,960	0/0:12,0:12:33.11:0,33,656	0/0:17,0:17:45.15:0,45,899	0/0:18,0:18:42.14:0,42,851	0/0:19,0:18:30.10:0,30,609	0/0:24,0:24:72.25:0,72,1452	0/0:27,0:27:60.19:0,60,1167	0/0:15,0:15:45.11:0,45,870	0/0:20,0:17:48.16:0,48,919	0/0:25,0:25:69.22:0,69,1330	0/0:19,0:19:54.19:0,54,1083	0/0:16,0:16:42.14:0,42,834	0/0:16,0:16:45.15:0,45,914	0/0:27,0:27:78.27:0,78,1583	0/0:25,0:25:72.22:0,72,1356	0/0:29,0:29:87.23:0,87,1684	0/0:21,0:21:60:0,60,1217	0/0:5,0:5:15.05:0,15,278
chr10	85133423	.	G	GCT	1626.02	PASS	AB=0.908;AC=22;AF=0.407;AN=54;BaseQRankSum=0.918;DP=629;FS=9.094;HRun=0;HaplotypeScore=137.7027;InbreedingCoeff=0.1617;MQ=62.46;MQ0=20;MQRankSum=-1.541;QD=4.35;ReadPosRankSum=0.705;VQSLOD=1.8453;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:29:16.80:208,17,0	0/0:4,1:5:0.47:0,0,1	./.	0/1:31,0:17:0:0,0,0	0/0:17,0:19:18.31:0,18,167	0/1:10,0:10:18.34:18,0,86	0/1:28,1:35:1.86:66,0,2	1/1:30,0:30:8.94:67,9,0	0/1:17,4:22:24.18:60,0,24	0/1:17,1:17:65.57:130,0,66	0/1:18,0:17:21.62:67,0,22	0/0:8,0:14:5.64:0,6,27	0/0:12,0:15:14.05:0,14,76	0/0:12,0:20:7.90:0,8,35	0/1:25,6:32:48.65:163,0,49	1/1:16,0:16:5.43:68,5,0	0/1:20,10:29:59.85:384,0,60	1/1:9,0:12:11.94:92,12,0	0/1:29,0:26:6.51:91,0,7	0/1:18,1:18:9.46:205,0,9	1/1:21,0:20:5.82:74,6,0	0/0:7,0:12:4.40:0,4,18	0/0:11,0:12:11.87:0,12,113	0/0:46,0:54:89.47:0,89,823	0/0:17,0:19:20.87:0,21,203	0/0:27,0:29:3.62:0,4,240	1/1:11,0:15:0.14:95,0,0	0/0:26,0:24:26.80:0,27,246
chr10	85133467	.	GCA	G	2650.23	PASS	AB=0.734;AC=32;AF=0.571;AN=56;BaseQRankSum=6.979;DP=601;FS=11.678;HRun=0;HaplotypeScore=144.8821;InbreedingCoeff=0.5310;MQ=48.61;MQ0=36;MQRankSum=-0.994;QD=7.55;ReadPosRankSum=-0.626;VQSLOD=2.8004;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,18:30:6:139,6,0	0/1:1,0:5:0.02:0,0,0	0/0:39,0:6:15.05:0,15,202	0/0:30,0:8:1.42:0,1,4	0/0:27,1:28:20.76:0,21,768	0/1:16,2:18:15.08:15,0,382	1/1:14,0:22:1.36:3,1,0	1/1:8,8:11:17.88:187,18,0	1/1:8,0:12:10.24:45,10,0	0/1:8,0:13:25.23:25,0,35	0/0:12,0:15:2.98:0,3,22	1/1:7,9:17:24.38:268,24,0	1/1:4,16:20:39.12:474,39,0	1/1:9,19:29:23.57:245,24,0	0/1:13,0:19:8.07:8,0,8	1/1:2,17:17:21.06:256,21,0	0/1:19,0:23:29.68:38,0,30	1/1:9,6:14:17.98:190,18,0	1/1:8,4:11:12.04:146,12,0	0/1:9,7:16:8.17:108,0,8	1/1:13,6:18:17.32:204,17,0	1/1:7,11:18:14.93:176,15,0	0/0:15,0:15:23.75:0,24,419	0/0:56,0:55:99:0,108,1618	0/0:21,0:21:38.47:0,38,575	0/0:26,0:25:47.99:0,48,920	1/1:10,10:14:19.31:315,19,0	0/0:19,0:18:35.77:0,36,545
chr10	85133478	.	C	CAG	854.38	PASS	AB=0.750;AC=13;AF=0.232;AN=56;BaseQRankSum=7.658;DP=613;FS=4.172;HRun=0;HaplotypeScore=155.2866;InbreedingCoeff=0.8068;MQ=49.04;MQ0=31;MQRankSum=-6.374;QD=9.49;ReadPosRankSum=-0.774;VQSLOD=3.1374;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:30:26.55:0,27,217	1/1:4,1:5:3.83:12,4,0	0/0:36,0:8:17.64:0,18,216	0/0:42,0:14:7.33:0,7,79	0/0:30,0:30:68.96:0,69,911	0/0:19,0:19:43.16:0,43,524	1/1:10,4:14:7.30:66,7,0	0/0:20,0:16:35.29:0,35,269	1/1:7,4:11:11.79:134,12,0	1/1:9,4:12:29.53:342,30,0	0/1:8,4:11:13.99:18,0,14	0/0:16,0:16:26.73:0,27,186	0/0:20,0:20:44.36:0,44,311	0/0:31,0:31:31.92:0,32,227	1/1:10,5:15:5.89:80,6,0	0/0:20,0:18:26.66:0,27,190	1/1:15,4:19:40.30:374,40,0	0/0:17,0:16:28.41:0,28,208	0/0:14,0:11:26.82:0,27,202	0/0:15,0:14:17.78:0,18,135	0/0:25,0:24:38.81:0,39,273	0/0:21,0:20:17.70:0,18,132	0/0:18,0:18:41.96:0,42,531	0/0:55,0:54:99:0,137,1825	0/0:18,0:18:45.12:0,45,629	0/0:33,0:32:93.22:0,93,1202	0/0:22,0:16:37.23:0,37,269	0/0:17,0:16:44.80:0,45,603
chr10	85133484	.	CAG	C	1199.17	PASS	AB=0.959;AC=27;AF=0.482;AN=56;BaseQRankSum=13.524;DP=632;FS=1.821;HRun=0;HaplotypeScore=151.9206;InbreedingCoeff=-0.0195;MQ=51.16;MQ0=29;MQRankSum=-2.759;QD=2.86;ReadPosRankSum=3.625;VQSLOD=2.8217;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,1:30:13.17:13,0,165	1/1:8,0:8:11.58:68,12,0	0/0:40,0:12:30.19:0,30,285	0/1:49,0:17:0.34:0,0,49	0/0:31,0:31:14.76:0,15,883	0/1:21,0:21:37.24:37,0,535	1/1:20,0:20:11.09:59,11,0	0/1:22,0:18:19.60:20,0,209	1/1:12,0:12:11.25:72,11,0	1/1:15,0:14:9.93:126,10,0	0/1:13,0:12:0:0,0,0	0/1:12,1:13:7.76:66,0,8	0/1:20,1:21:28.63:163,0,29	0/1:26,1:27:68.33:68,0,72	1/1:12,1:13:5.33:26,5,0	0/1:20,0:18:46.12:74,0,46	1/1:18,0:18:29.12:166,29,0	0/1:13,2:14:44.06:134,0,44	0/1:12,1:10:14.87:15,0,93	0/1:11,2:12:14.13:24,0,14	0/1:25,1:26:71.11:71,0,101	0/1:23,1:23:65.61:66,0,73	0/0:19,0:19:13.09:0,13,603	0/0:54,0:53:87.05:0,87,1872	0/0:17,0:17:32.95:0,33,652	0/0:34,0:34:45.63:0,46,1181	0/1:23,1:18:78.26:106,0,78	0/0:17,0:16:15.93:0,16,436
chr10	85133486	.	GACACAC	G	1033.87	PASS	AB=0.959;AC=14;AF=0.250;AN=56;BaseQRankSum=9.901;DP=630;FS=3.050;HRun=0;HaplotypeScore=184.9387;InbreedingCoeff=0.7285;MQ=52.90;MQ0=28;MQRankSum=-8.545;QD=6.94;ReadPosRankSum=-1.603;VQSLOD=2.7184;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:30:33.56:0,34,746	1/1:4,4:8:11.68:93,12,0	0/0:41,0:12:8.56:0,9,404	0/1:48,0:18:15.56:16,0,188	0/0:30,0:30:65.39:0,65,1871	0/0:20,0:20:48.61:0,49,1145	1/1:13,8:21:13.69:134,14,0	0/0:22,0:18:45.11:0,45,876	1/1:7,4:11:11.92:182,12,0	1/1:9,6:14:28.12:368,28,0	0/0:7,4:10:0:0,0,0	0/0:14,0:15:26.05:0,26,501	0/0:21,0:21:48.16:0,48,975	0/0:26,0:27:32.34:0,32,615	1/1:9,6:15:3.27:55,3,0	0/0:20,0:18:30.10:0,30,657	1/1:9,6:15:27.41:351,27,0	0/1:14,0:14:14.86:15,0,342	0/0:14,0:11:29.58:0,30,573	0/0:13,0:12:14.55:0,15,334	0/0:26,0:26:36.69:0,37,788	0/0:24,0:23:26.34:0,26,520	0/0:19,0:19:39.13:0,39,1245	0/0:54,0:53:99:0,125,3606	0/0:16,0:16:42.06:0,42,1205	0/0:34,0:34:93.28:0,93,2339	0/0:24,0:18:42.11:0,42,863	0/0:16,0:16:38.99:0,39,829
chr10	85133500	.	GAC	G	710.83	PASS	AB=0.625;AC=11;AF=0.196;AN=56;BaseQRankSum=9.173;DP=643;FS=2.347;HRun=0;HaplotypeScore=150.9395;InbreedingCoeff=0.7841;MQ=55.89;MQ0=22;MQRankSum=-8.590;QD=9.74;ReadPosRankSum=1.922;VQSLOD=3.2472;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:30:47.55:0,48,792	1/1:1,7:8:11.90:116,12,0	0/0:39,0:17:36.55:0,37,564	0/0:54,0:26:46.14:0,46,510	0/0:28,0:28:62.32:0,62,968	0/0:19,0:19:44.98:0,45,748	1/1:3,16:19:12.46:131,12,0	0/0:29,0:27:70.43:0,70,1140	1/1:2,6:8:9.03:107,9,0	0/1:6,9:14:22.24:246,0,22	0/0:2,7:9:0:0,0,0	0/0:17,0:17:36.59:0,37,606	0/0:22,0:22:42.29:0,42,760	0/0:25,0:25:35.27:0,35,586	1/1:2,6:8:3:35,3,0	0/0:22,0:20:35.93:0,36,554	1/1:7,8:15:15.68:236,16,0	0/0:19,0:18:15.44:0,15,500	0/0:16,0:14:36.03:0,36,525	0/0:13,0:12:21.07:0,21,352	0/0:29,0:28:49.32:0,49,840	0/0:25,0:25:36.04:0,36,588	0/0:24,0:24:57.08:0,57,907	0/0:55,0:54:99:0,127,2021	0/0:16,0:16:39.12:0,39,652	0/0:36,0:36:99:0,99,1644	0/0:23,0:17:45.13:0,45,694	0/0:16,0:15:41.24:0,41,549
chr10	85133552	.	CAGAGACAGAGAGAT	C	2853.74	PASS	AB=0.944;AC=12;AF=0.214;AN=56;BaseQRankSum=8.741;DP=610;FS=0.000;HRun=0;HaplotypeScore=238.0276;InbreedingCoeff=0.7425;MQ=56.51;MQ0=44;MQRankSum=-8.199;QD=44.59;ReadPosRankSum=-3.701;VQSLOD=2.5733;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:79.56:0,80,3639	1/1:0,2:5:15.05:458,15,0	0/0:37,0:9:4.75:0,5,391	0/0:50,0:14:18.73:0,19,696	0/0:17,0:17:39.15:0,39,1915	0/0:19,0:19:57.17:0,57,2777	1/1:5,0:5:2.10:18,2,0	0/0:32,0:25:68.65:0,69,1765	1/1:2,7:9:21.07:822,21,0	0/1:7,1:8:4.50:237,0,5	0/1:4,0:4:12.98:103,0,13	0/0:15,0:15:42.14:0,42,2407	0/0:24,0:24:61.44:0,61,2989	0/0:20,0:20:41.91:0,42,2075	1/1:2,22:24:38.93:1150,39,0	0/0:17,0:17:45.60:0,46,1285	1/1:7,1:9:16.22:238,16,0	0/0:21,0:20:57.20:0,57,3186	0/0:36,0:30:77.56:0,78,2044	0/0:6,0:6:12.04:0,12,406	0/0:25,0:24:36.99:0,37,1147	0/0:27,0:26:61.57:0,62,2873	0/0:22,0:22:52.08:0,52,2697	0/0:46,0:46:99:0,104,5227	0/0:15,0:15:45.15:0,45,1924	0/0:44,0:44:99:0,129,6248	0/0:20,0:18:51.16:0,51,1320	0/0:15,0:15:42.14:0,42,2465
chr10	85133566	.	TAGGGAGAGACAGAGACAGAGAC	T	5066.19	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=1.088;DP=568;FS=22.279;HRun=0;HaplotypeScore=297.0399;InbreedingCoeff=0.8576;MQ=62.40;MQ0=14;MQRankSum=-1.804;QD=39.58;ReadPosRankSum=-2.420;VQSLOD=2.2989;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:55.41:0,55,1822	0/0:3,0:3:5.49:0,5,87	0/0:31,0:11:4.76:0,5,98	0/0:53,0:22:8.96:0,9,478	0/0:19,0:19:39.13:0,39,1884	0/0:16,0:16:33.11:0,33,1534	0/1:8,0:7:0:0,0,0	1/1:10,7:15:21.02:393,21,0	0/0:15,0:15:38.54:0,39,918	0/0:5,0:5:9.03:0,9,323	0/0:2,0:2:5.85:0,6,93	0/0:17,0:17:39.13:0,39,1719	0/0:20,0:20:43.39:0,43,2404	0/0:19,0:19:45.14:0,45,1763	0/0:23,0:23:37.37:0,37,726	1/1:19,0:19:43:1207,43,0	0/0:8,0:8:16.21:0,16,384	0/0:21,0:21:51.09:0,51,1911	1/1:20,18:33:54.11:1333,54,0	1/1:5,0:5:6.02:232,6,0	1/1:20,0:19:26.70:596,27,0	0/0:27,0:26:49.87:0,50,2084	0/0:21,0:21:38.13:0,38,1433	0/0:40,0:40:66.19:0,66,2934	0/0:14,0:14:26.96:0,27,909	0/0:39,0:39:81.28:0,81,3758	1/1:21,0:21:39.13:1306,39,0	0/0:14,0:14:33.11:0,33,1352
chr10	85133582	.	C	CAG	2351.50	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.627;DP=610;FS=11.115;HRun=0;HaplotypeScore=139.9778;InbreedingCoeff=0.8948;MQ=53.94;MQ0=38;MQRankSum=-0.733;QD=21.18;ReadPosRankSum=-1.685;VQSLOD=3.5197;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:67.08:0,67,880	0/0:7,0:7:15.01:0,15,178	0/0:33,0:6:6.91:0,7,114	0/0:47,0:15:30.99:0,31,329	0/0:27,0:26:60.19:0,60,821	0/0:14,0:14:39.13:0,39,535	0/0:16,0:15:5.97:0,6,65	1/1:18,0:11:21.01:250,21,0	0/0:17,0:17:45.09:0,45,584	0/0:19,0:18:48.15:0,48,639	0/0:11,0:10:14.97:0,15,206	0/0:17,0:17:42.14:0,42,576	0/0:17,0:17:46.01:0,46,619	0/0:17,0:17:51.14:0,51,667	0/0:28,0:28:47.37:0,47,651	1/1:11,8:19:44.42:573,44,0	0/0:14,0:14:25.93:0,26,228	0/0:23,0:23:60.09:0,60,736	1/1:29,0:22:43.28:601,43,0	1/1:4,4:8:12.04:186,12,0	1/1:18,3:21:0.32:389,0,0	0/0:26,0:25:63.08:0,63,836	0/0:28,0:27:60.15:0,60,806	0/0:41,0:41:81.14:0,81,1111	0/0:14,0:14:35.98:0,36,468	0/0:31,0:31:81.27:0,81,1113	1/1:10,6:16:35.55:527,36,0	0/0:21,0:20:54.18:0,54,736
chr10	85133589	.	A	ATT	1646.38	PASS	AB=0.917;AC=10;AF=0.179;AN=56;BaseQRankSum=9.492;DP=623;FS=3.170;HRun=0;HaplotypeScore=144.0052;InbreedingCoeff=0.7335;MQ=52.86;MQ0=48;MQRankSum=-2.667;QD=15.10;ReadPosRankSum=-0.811;VQSLOD=3.1973;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:76.11:0,76,1165	0/0:7,0:7:15.05:0,15,231	0/0:33,0:5:8.67:0,9,119	0/0:44,0:12:29.78:0,30,372	0/0:29,0:28:68.33:0,68,1090	0/0:14,0:14:42.14:0,42,681	0/0:17,0:16:9:0,9,147	1/1:18,0:10:14.97:123,15,0	0/0:20,0:20:45.11:0,45,700	0/0:22,0:19:51.17:0,51,828	0/0:13,0:11:20.99:0,21,343	0/0:16,0:16:45.14:0,45,710	0/0:17,0:17:46.01:0,46,736	0/0:16,0:16:48.16:0,48,783	0/0:30,0:29:48.52:0,49,773	0/1:16,4:20:23.95:358,0,24	0/0:15,0:15:29.76:0,30,408	0/0:20,0:20:57.13:0,57,867	0/1:23,0:18:7.05:411,0,7	1/1:8,1:9:11.79:121,12,0	1/1:20,3:22:13.33:286,13,0	0/0:27,0:26:65.29:0,65,1063	0/0:28,0:26:65.28:0,65,1037	0/0:44,0:44:94.51:0,95,1535	0/0:17,0:17:42.12:0,42,658	0/0:33,0:33:96.32:0,96,1539	1/1:11,5:16:39.43:510,39,0	0/0:20,0:19:57.18:0,57,892
chr10	85133664	.	GAGAGACAGAGAC	G	4272.40	PASS	AB=0.772;AC=10;AF=0.179;AN=56;BaseQRankSum=4.670;DP=734;FS=1.767;HRun=0;HaplotypeScore=256.6378;InbreedingCoeff=0.4827;MQ=68.69;MQ0=9;MQRankSum=-5.591;QD=32.86;ReadPosRankSum=0.017;VQSLOD=4.3230;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:80.99:0,81,2801	0/1:4,9:13:43.01:326,0,43	0/0:39,0:19:27.16:0,27,356	0/0:64,0:31:3.89:0,4,311	0/0:27,0:27:51.17:0,51,1940	0/0:25,0:25:66.23:0,66,2501	0/1:25,0:24:99:252,0,261	0/0:39,0:38:99:0,102,2641	1/1:3,15:18:30.10:1007,30,0	0/1:13,19:31:99:1327,0,314	0/1:17,3:19:42.74:303,0,43	0/0:22,0:22:57.18:0,57,2593	0/0:23,0:23:63.22:0,63,2850	0/0:24,0:24:60.07:0,60,2707	1/1:7,2:9:24.97:644,25,0	0/0:27,0:27:45.63:0,46,960	1/1:12,1:13:14.88:414,15,0	0/0:22,0:22:66.20:0,66,2182	0/0:26,0:25:60.19:0,60,1367	0/0:21,0:21:40.80:0,41,1325	0/0:46,0:47:82.85:0,83,2449	0/0:21,0:21:54.02:0,54,1583	0/0:21,0:20:42.11:0,42,1589	0/0:47,0:46:99:0,111,4654	0/0:21,0:21:57.20:0,57,1862	0/0:22,0:22:63.21:0,63,2389	0/0:14,0:14:27.08:0,27,553	0/0:13,0:13:21.07:0,21,843
chr10	85133670	.	C	CAGGG	2039.35	PASS	AB=0.945;AC=11;AF=0.196;AN=56;BaseQRankSum=5.007;DP=698;FS=3.411;HRun=0;HaplotypeScore=166.9696;InbreedingCoeff=0.3547;MQ=66.75;MQ0=18;MQRankSum=-2.250;QD=11.65;ReadPosRankSum=-1.028;VQSLOD=2.7396;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:86.28:0,86,1628	0/1:13,0:13:62.94:208,0,63	0/0:36,0:15:27.48:0,27,338	0/1:55,0:24:12.84:13,0,272	0/0:20,0:20:51.17:0,51,980	0/0:25,0:25:69.24:0,69,1325	0/1:20,2:21:99:217,0,262	0/0:44,0:38:43.37:0,43,1818	1/1:17,1:18:2.95:302,3,0	0/1:30,0:29:99:445,0,440	0/1:13,4:16:43.64:229,0,44	0/0:23,0:23:63.20:0,63,1168	0/0:26,0:26:63.20:0,63,1221	0/0:22,0:22:60.18:0,60,1161	1/1:4,5:9:24.06:526,24,0	0/0:25,0:25:48.01:0,48,903	1/1:8,3:11:6.67:252,7,0	0/0:23,0:23:69.21:0,69,1267	0/0:26,0:24:28.49:0,28,1122	0/0:21,0:20:42.14:0,42,773	0/0:47,0:46:68.16:0,68,1524	0/0:18,0:18:54.02:0,54,998	0/0:20,0:19:45.12:0,45,814	0/0:43,0:42:99:0,108,2048	0/0:22,0:22:63.20:0,63,1168	0/0:24,0:24:72.24:0,72,1331	0/0:15,0:15:22:0,22,427	0/0:7,0:7:21.07:0,21,407
chr10	85133708	.	CAGAGACAGAGAGATTGAG	C	2655.62	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=2.733;DP=661;FS=3.304;HRun=0;HaplotypeScore=300.8889;InbreedingCoeff=0.0240;MQ=53.15;MQ0=55;MQRankSum=-3.876;QD=16.39;ReadPosRankSum=-0.689;VQSLOD=2.1001;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:41:99:0,99,3859	0/0:8,0:8:17.38:0,17,279	0/0:34,0:4:9.03:0,9,241	0/0:48,0:9:15.13:0,15,188	0/0:18,0:17:39.13:0,39,1413	0/0:24,0:24:60.21:0,60,2476	0/0:18,0:17:5.19:0,5,842	1/1:20,12:26:0.51:727,1,0	0/0:23,0:23:54.17:0,54,1612	0/0:28,0:22:54.19:0,54,1574	0/0:16,0:16:22.82:0,23,598	0/0:25,0:25:57.17:0,57,2375	0/0:26,0:26:60.20:0,60,2226	0/0:25,0:25:46.58:0,47,2310	0/0:15,0:15:6.77:0,7,1114	0/1:24,0:22:85.87:656,0,86	0/0:14,0:14:15.46:0,15,972	0/0:12,0:12:30.10:0,30,1176	0/1:29,0:16:99:493,0,108	0/1:18,0:17:54.09:69,0,54	0/1:38,0:37:99:379,0,113	0/0:13,0:13:34.36:0,34,1165	0/0:14,0:12:33.10:0,33,1136	0/0:41,0:40:99:0,101,3905	0/0:20,0:20:48.16:0,48,2047	0/0:24,0:24:66.23:0,66,2599	0/1:21,0:21:99:457,0,103	0/0:9,0:9:21.07:0,21,735
chr10	85133721	.	ATT	A	2792.86	PASS	AB=0.815;AC=12;AF=0.214;AN=56;BaseQRankSum=6.337;DP=657;FS=7.793;HRun=2;HaplotypeScore=148.4199;InbreedingCoeff=0.7727;MQ=58.06;MQ0=36;MQRankSum=-1.461;QD=15.35;ReadPosRankSum=0.436;VQSLOD=0.5283;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:99:0,120,2354	0/0:6,0:6:17.26:0,17,215	0/0:40,0:9:23.96:0,24,333	0/1:59,0:17:3.92:4,0,164	0/0:18,0:18:54.19:0,54,1030	0/0:23,0:23:66.21:0,66,1274	0/0:23,0:21:3.26:0,3,583	1/1:13,0:12:30.04:405,30,0	0/0:23,0:23:60.19:0,60,1079	0/0:29,0:23:68.95:0,69,1204	0/0:19,0:19:34.16:0,34,500	0/0:23,0:23:66.23:0,66,1300	0/0:21,0:21:63.21:0,63,1188	0/0:25,0:25:75.23:0,75,1464	0/0:23,0:23:27.14:0,27,928	1/1:1,23:23:42.10:652,42,0	0/0:17,0:17:20.82:0,21,665	0/0:12,0:12:36.12:0,36,680	1/1:7,16:15:45.02:639,45,0	1/1:0,13:12:16.17:259,16,0	0/1:14,17:31:28.43:476,0,28	0/0:16,0:16:43.39:0,43,782	0/0:15,0:13:39.09:0,39,675	0/0:35,0:35:97.58:0,98,1953	0/0:27,0:27:75.21:0,75,1470	0/0:30,0:30:90.26:0,90,1657	1/1:0,18:18:33.11:536,33,0	0/0:8,0:8:11.35:0,11,339
chr10	85133738	.	CAGGG	C	1299.62	PASS	AB=0.963;AC=12;AF=0.214;AN=56;BaseQRankSum=9.742;DP=722;FS=17.676;HRun=0;HaplotypeScore=182.7371;InbreedingCoeff=0.7123;MQ=57.30;MQ0=35;MQRankSum=1.305;QD=8.72;ReadPosRankSum=2.507;VQSLOD=1.9395;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:44:99:0,129,3338	1/1:5,2:7:8.99:102,9,0	0/0:40,0:10:26.98:0,27,551	0/0:59,0:18:16.61:0,17,272	0/0:25,0:24:69.13:0,69,1701	0/0:24,0:24:69.21:0,69,1649	0/1:23,2:23:99:226,0,161	0/0:26,0:19:33.85:0,34,698	1/1:23,1:24:0.58:282,1,0	1/1:23,0:23:25.59:265,26,0	1/1:19,0:19:21.07:134,21,0	0/0:29,0:29:84.26:0,84,2050	0/0:21,0:21:57.15:0,57,1341	0/0:25,0:25:74.83:0,75,1864	1/1:29,0:29:29.40:317,29,0	0/0:24,0:23:57.16:0,57,1347	0/1:21,0:21:99:144,0,196	0/0:16,0:16:42.10:0,42,1001	0/0:21,0:14:42.14:0,42,1096	0/0:16,0:13:27.09:0,27,685	0/0:41,0:40:72.74:0,73,1747	0/0:21,0:19:51.15:0,51,1213	0/0:15,0:15:45.14:0,45,1120	0/0:35,0:35:89.61:0,90,2165	0/0:27,0:26:72.20:0,72,1802	0/0:33,0:33:93.30:0,93,2366	0/0:19,0:19:45.14:0,45,1090	0/0:9,0:9:27.09:0,27,739
chr10	85133742	.	GAGAGAC	G	1133.32	PASS	AB=0.961;AC=9;AF=0.161;AN=56;BaseQRankSum=9.040;DP=729;FS=3.563;HRun=0;HaplotypeScore=201.9583;InbreedingCoeff=0.1064;MQ=57.32;MQ0=36;MQRankSum=-1.218;QD=5.58;ReadPosRankSum=-2.628;VQSLOD=2.4580;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:47:99:0,123,3987	1/1:6,1:7:11.16:147,11,0	0/0:42,0:10:21.02:0,21,378	0/1:59,0:18:14.72:15,0,90	0/0:26,0:25:69.24:0,69,2165	0/0:23,0:23:57.20:0,57,1899	0/1:23,3:24:99:159,0,147	0/0:28,0:21:39.87:0,40,1092	0/1:22,1:23:99:163,0,114	0/1:19,1:19:99:246,0,136	0/1:18,0:18:27.37:46,0,27	0/0:29,0:29:69.24:0,69,2143	0/0:18,0:18:42.13:0,42,1354	0/0:26,0:26:69.24:0,69,2195	0/1:27,1:28:5.35:222,0,5	0/0:22,0:21:16.26:0,16,1398	0/1:21,1:22:99:279,0,309	0/0:15,0:15:42.14:0,42,1280	0/0:22,0:14:42.14:0,42,1266	0/0:17,0:13:30.10:0,30,996	0/0:48,0:47:85.66:0,86,2652	0/0:22,0:20:48.16:0,48,1508	0/0:16,0:15:39.13:0,39,1312	0/0:34,0:34:77.82:0,78,2262	0/0:27,0:26:60.21:0,60,1988	0/0:32,0:32:78.27:0,78,2583	0/0:21,0:21:45.15:0,45,1363	0/0:9,0:9:27.09:0,27,930
chr10	85134990	.	A	AT	6130.42	PASS	AB=0.734;AC=24;AF=0.429;AN=56;BaseQRankSum=-12.154;DP=616;FS=1.490;HRun=10;HaplotypeScore=65.5021;InbreedingCoeff=0.8670;MQ=79.85;MQ0=0;MQRankSum=-1.293;QD=19.52;ReadPosRankSum=0.043;VQSLOD=5.6522;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,31:41:32.38:744,32,0	0/1:2,5:8:3.76:152,0,4	0/0:26,0:26:52.36:0,52,393	0/0:19,0:20:18.27:0,18,149	0/1:23,3:26:8.83:9,0,341	0/0:16,0:16:44.93:0,45,369	1/1:7,23:30:22.89:655,23,0	0/0:27,0:26:62.87:0,63,517	1/1:4,23:27:51.93:702,52,0	1/1:4,23:27:60.15:640,60,0	1/1:4,9:13:5.91:265,6,0	1/1:4,21:26:47.95:494,48,0	1/1:4,16:20:38.90:386,39,0	1/1:4,9:13:24.06:256,24,0	1/1:3,18:22:50.96:526,51,0	0/0:22,0:22:62.91:0,63,517	1/1:10,31:41:43.95:878,44,0	0/0:21,0:21:50.94:0,51,419	0/0:29,2:31:48.34:0,48,602	0/0:14,0:14:38.96:0,39,320	0/0:14,0:14:35.91:0,36,288	1/1:5,14:20:23.27:424,23,0	0/0:15,0:16:34.98:0,35,277	0/0:19,0:20:34.28:0,34,400	0/0:15,0:15:35.95:0,36,295	0/0:19,0:19:47.93:0,48,394	0/0:28,0:29:70.92:0,71,572	0/0:10,0:10:29.96:0,30,246
chr10	85136761	.	G	GA	3815.87	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-12.827;DP=668;FS=0.374;HRun=9;HaplotypeScore=72.9534;InbreedingCoeff=0.9879;MQ=78.29;MQ0=4;MQRankSum=0.289;QD=24.78;ReadPosRankSum=3.000;VQSLOD=4.2937;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:89.93:0,90,771	1/1:3,13:16:30.08:332,30,0	0/0:22,0:14:35.14:0,35,256	0/0:43,0:34:8.58:0,9,473	0/0:25,1:26:29.75:0,30,483	0/0:19,0:18:53.99:0,54,469	1/1:4,20:24:51.14:564,51,0	0/0:33,0:33:77.98:0,78,677	1/1:1,25:26:63.17:697,63,0	1/1:4,26:30:75.20:829,75,0	1/1:1,17:18:39.11:431,39,0	0/0:15,0:15:35.92:0,36,312	0/0:23,0:23:62.97:0,63,547	0/0:22,0:22:50.98:0,51,442	1/1:2,18:20:51.14:564,51,0	0/0:22,0:22:59.98:0,60,521	1/1:4,16:20:36.10:398,36,0	0/0:17,0:17:47.99:0,48,416	0/0:34,0:35:97.95:0,98,825	0/0:18,0:18:41.96:0,42,360	0/0:14,0:14:38.99:0,39,339	0/0:29,0:28:65.92:0,66,565	0/0:21,1:22:26.79:0,27,458	0/0:32,0:32:83.98:0,84,729	0/0:19,0:19:38.98:0,39,338	0/0:35,1:36:62.78:0,63,774	0/0:22,0:22:62.99:0,63,546	0/0:12,0:12:32.99:0,33,286
chr10	85138526	.	CTT	C	8439.85	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.563;DP=607;FS=1.852;HRun=2;HaplotypeScore=78.4097;InbreedingCoeff=0.9946;MQ=87.66;MQ0=0;MQRankSum=-2.044;QD=46.37;ReadPosRankSum=1.348;VQSLOD=4.8537;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:44:99:2007,123,0	0/0:9,0:9:27.09:0,27,515	0/0:18,0:18:48.16:0,48,956	0/0:25,0:24:55.87:0,56,1229	0/0:19,0:19:57.20:0,57,1139	0/0:22,0:22:66.23:0,66,1338	0/0:28,0:28:84.25:0,84,1610	1/1:0,22:22:66.21:1052,66,0	0/0:28,0:28:84.29:0,84,1707	0/0:22,0:22:63.22:0,63,1277	0/0:7,0:7:18.06:0,18,365	0/0:20,0:20:60.21:0,60,1216	0/0:19,0:19:57.20:0,57,1145	0/0:24,0:24:72.25:0,72,1459	0/0:27,0:27:81.26:0,81,1597	1/1:1,24:25:14.28:1114,14,0	0/0:33,0:33:99:0,99,1996	1/1:0,12:12:36.12:587,36,0	1/1:0,15:15:45.15:733,45,0	1/1:0,19:19:54.14:850,54,0	1/1:0,20:20:60.20:976,60,0	0/0:23,0:23:69.19:0,69,1340	0/0:19,0:19:57.20:0,57,1142	0/0:33,0:33:99:0,99,2005	0/0:14,0:14:42.14:0,42,852	0/0:28,0:28:84.29:0,84,1688	1/1:0,25:25:69:1121,69,0	0/0:7,0:7:21.07:0,21,427
chr10	85139096	.	G	GA	963.27	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.246;DP=724;FS=0.739;HRun=1;HaplotypeScore=68.5413;InbreedingCoeff=0.9987;MQ=89.14;MQ0=0;MQRankSum=-0.593;QD=37.05;ReadPosRankSum=-1.214;VQSLOD=3.5515;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,156,1887	0/0:11,0:11:33.05:0,33,408	0/0:25,0:25:52.28:0,52,677	0/0:28,0:28:68.93:0,69,790	0/0:22,0:22:66.11:0,66,794	0/0:19,0:19:54.15:0,54,680	0/0:28,0:28:81.24:0,81,1022	0/0:36,0:36:99:0,102,1310	0/0:21,0:21:63.20:0,63,804	0/0:28,0:28:84.23:0,84,1048	0/0:22,0:22:66.20:0,66,838	0/0:23,0:23:69.22:0,69,881	0/0:22,0:22:66.20:0,66,840	0/0:19,0:19:57.17:0,57,724	0/0:30,0:30:87.26:0,87,1099	0/0:23,0:23:66.21:0,66,851	0/0:37,0:37:99:0,111,1422	1/1:0,26:26:72.24:1058,72,0	0/0:21,0:21:57.13:0,57,683	0/0:31,0:31:84.27:0,84,1089	0/0:48,0:48:99:0,135,1654	0/0:18,0:18:48.16:0,48,622	0/0:18,0:18:54.15:0,54,671	0/0:32,0:32:93.18:0,93,1098	0/0:23,0:23:69.06:0,69,868	0/0:26,0:26:75.24:0,75,973	0/0:24,0:23:72.22:0,72,918	0/0:9,0:9:27.09:0,27,350
chr10	85140322	.	C	CTTTT	5226.51	PASS	AB=0.537;AC=17;AF=0.304;AN=56;BaseQRankSum=0.187;DP=541;FS=0.410;HRun=10;HaplotypeScore=106.4379;InbreedingCoeff=0.8537;MQ=64.49;MQ0=2;MQRankSum=-6.327;QD=28.25;ReadPosRankSum=-4.298;VQSLOD=2.4592;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,18:33:66.22:1291,66,0	0/0:12,0:12:36.12:0,36,503	0/0:24,0:12:16.21:0,16,195	0/0:14,0:8:7.76:0,8,84	0/0:19,0:20:50.54:0,51,623	0/0:14,0:14:42.06:0,42,546	0/0:13,0:14:26.55:0,27,318	1/1:10,0:29:58.66:657,59,0	0/0:21,0:21:54.06:0,54,645	0/0:30,0:30:69.09:0,69,894	0/0:20,0:20:47.90:0,48,598	0/0:5,0:14:16.11:0,16,82	0/0:2,0:10:11.73:0,12,58	0/0:5,0:17:13.77:0,14,69	0/0:15,0:15:33.01:0,33,404	1/1:0,6:6:15.05:353,15,0	0/0:22,0:22:61.38:0,61,823	1/1:7,0:16:8.90:159,9,0	1/1:12,15:28:53.68:846,54,0	1/1:17,4:21:44.51:712,45,0	1/1:2,2:4:3.01:71,3,0	0/1:3,0:22:12.31:12,0,31	0/0:23,0:23:55.91:0,56,734	0/0:20,0:20:36.02:0,36,490	0/0:16,0:16:45.14:0,45,618	0/0:20,0:21:55.39:0,55,750	1/1:13,8:24:68.17:1126,68,0	0/0:29,0:29:69.11:0,69,929
chr10	85141519	.	C	CGAGGAA	32901.95	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-9.898;DP=672;FS=4.756;HRun=0;HaplotypeScore=129.7939;InbreedingCoeff=0.9989;MQ=82.47;MQ0=0;MQRankSum=-20.252;QD=96.20;ReadPosRankSum=-0.339;VQSLOD=6.8693;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,26:37:93.28:3271,93,0	1/1:3,7:10:30.07:1032,30,0	0/0:31,0:31:84.75:0,85,1897	0/0:19,0:19:37.80:0,38,856	0/0:30,0:30:90.24:0,90,2120	0/0:15,0:15:45.14:0,45,1102	1/1:4,11:19:45.11:1593,45,0	1/1:7,13:23:69.21:2329,69,0	1/1:7,18:27:75.26:2683,75,0	1/1:9,29:40:99:4180,114,0	1/1:2,11:14:36.08:1256,36,0	0/0:33,0:33:99:0,99,2470	0/0:28,0:28:81.26:0,81,1999	0/0:29,0:29:87.28:0,87,2134	1/1:3,26:31:87.30:3146,87,0	1/1:6,22:29:78.27:2813,78,0	1/1:0,8:8:24.08:899,24,0	1/1:1,8:10:27.09:1013,27,0	1/1:7,8:20:53.96:1636,54,0	1/1:6,24:33:93.24:3222,93,0	1/1:5,10:16:39.09:1360,39,0	0/0:35,0:35:99:0,105,2606	0/0:25,0:25:69.22:0,69,1636	0/0:23,0:23:66.23:0,66,1661	0/0:20,0:20:60.21:0,60,1538	0/0:35,0:35:99:0,105,2548	1/1:2,22:25:66.23:2468,66,0	0/0:7,0:7:21.07:0,21,522
chr10	85142007	.	C	CTG	11069.63	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.633;DP=732;FS=9.035;HRun=0;HaplotypeScore=106.6257;InbreedingCoeff=0.9971;MQ=81.32;MQ0=0;MQRankSum=-4.833;QD=46.32;ReadPosRankSum=1.405;VQSLOD=5.5320;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,43:51:99:2195,114,0	0/0:5,0:5:15.05:0,15,230	0/0:26,0:26:69.18:0,69,948	0/0:22,0:22:26.12:0,26,756	0/0:27,0:27:75.25:0,75,1148	0/0:22,0:22:63.21:0,63,964	0/0:23,0:23:66.19:0,66,966	1/1:5,22:27:75.24:1415,75,0	0/0:42,0:42:99:0,114,1721	0/0:26,0:26:75.25:0,75,1148	0/0:21,0:21:60.18:0,60,891	0/0:22,0:22:66.21:0,66,985	0/0:33,0:33:99:0,99,1506	0/0:31,0:31:90.31:0,90,1375	0/0:37,0:37:99:0,111,1700	1/1:2,25:28:66.23:1275,66,0	0/0:29,0:29:84.29:0,84,1286	1/1:1,14:16:36.12:695,36,0	1/1:3,27:29:87.25:1609,87,0	1/1:0,18:18:51.17:962,51,0	1/1:3,33:37:81.18:1539,81,0	0/0:28,0:28:78.25:0,78,1168	0/0:17,0:17:48.16:0,48,732	0/0:26,0:26:78.22:0,78,1160	0/0:24,0:24:63.40:0,63,1007	0/0:20,0:20:60.20:0,60,918	1/1:2,29:31:72.25:1380,72,0	0/0:12,0:12:36.12:0,36,551
chr10	85142437	.	TG	T	5854.72	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.334;DP=544;FS=1.549;HRun=4;HaplotypeScore=54.5280;InbreedingCoeff=0.9956;MQ=72.33;MQ0=0;MQRankSum=-2.406;QD=32.35;ReadPosRankSum=1.968;VQSLOD=5.3888;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:72.22:863,72,0	0/0:8,0:8:21.07:0,21,292	0/0:14,0:14:35.91:0,36,457	0/0:15,0:14:28.73:0,29,427	0/0:15,0:15:45.15:0,45,630	0/0:21,0:21:60.19:0,60,824	0/0:23,0:23:63.19:0,63,863	1/1:0,16:16:45.14:540,45,0	0/0:18,0:18:54.16:0,54,724	0/0:19,0:19:57.19:0,57,798	0/0:6,0:6:15.05:0,15,209	0/0:25,0:25:72.20:0,72,985	0/0:15,0:15:45.14:0,45,604	0/0:22,0:22:66.22:0,66,917	0/0:12,0:12:30.10:0,30,419	1/1:1,13:14:33.10:396,33,0	0/0:51,0:49:99:0,147,2041	1/1:0,30:30:90.28:1080,90,0	1/1:1,21:22:57.16:672,57,0	1/1:0,11:11:33.10:396,33,0	1/1:1,37:38:99:1224,102,0	0/0:12,0:12:33.10:0,33,439	0/0:7,0:7:21.07:0,21,293	0/0:29,0:29:87.28:0,87,1202	0/0:18,0:18:51.14:0,51,678	0/0:18,0:18:51.17:0,51,714	1/1:0,19:19:57.17:684,57,0	0/0:14,0:14:42.13:0,42,571
chr10	85144959	.	T	TG	7523.18	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-12.833;DP=732;FS=4.600;HRun=5;HaplotypeScore=70.1295;InbreedingCoeff=0.9992;MQ=83.78;MQ0=0;MQRankSum=-2.285;QD=33.00;ReadPosRankSum=-0.132;VQSLOD=5.3173;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,42:47:99:1456,111,0	0/0:12,0:12:36.09:0,36,387	0/0:21,0:21:56.81:0,57,592	0/0:24,0:24:63.10:0,63,664	0/0:24,0:24:69.17:0,69,742	0/0:18,0:18:45.11:0,45,484	0/0:30,0:30:81.02:0,81,870	1/1:1,26:27:75.24:987,75,0	0/0:31,0:31:87.20:0,87,926	0/0:21,0:21:60.14:0,60,639	0/0:20,0:20:54.12:0,54,572	0/0:22,0:22:60.15:0,60,644	0/0:24,0:24:66.15:0,66,700	0/0:26,0:26:75.17:0,75,797	0/0:25,0:25:72.18:0,72,774	1/1:5,19:24:69.20:878,69,0	0/0:38,0:38:99:0,114,1214	0/0:31,0:31:87.19:0,87,924	1/1:4,27:31:81.25:1049,81,0	1/1:5,25:30:66.21:863,66,0	1/1:3,45:48:99:1579,120,0	0/0:24,0:24:66.15:0,66,695	0/0:30,0:30:81.19:0,81,862	0/0:28,0:28:81.17:0,81,855	0/0:23,0:23:69.12:0,69,722	0/0:25,0:25:57.13:0,57,606	1/1:0,21:21:54.18:711,54,0	0/0:7,0:7:21.05:0,21,226
chr10	85145062	.	TTA	T	6903.61	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=17.500;DP=656;FS=3.948;HRun=0;HaplotypeScore=92.1024;InbreedingCoeff=0.9986;MQ=80.45;MQ0=0;MQRankSum=-5.968;QD=41.34;ReadPosRankSum=0.358;VQSLOD=6.2715;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:90.31:1377,90,0	0/0:10,0:10:30.10:0,30,609	0/0:17,0:17:48.16:0,48,943	0/0:20,0:20:53.85:0,54,1021	0/0:25,0:25:75.26:0,75,1524	0/0:24,0:24:72.25:0,72,1463	0/0:25,0:25:75.26:0,75,1524	1/1:1,15:16:42.14:632,42,0	0/0:25,0:25:75.26:0,75,1503	0/0:28,0:28:84.29:0,84,1654	0/0:14,0:14:42.14:0,42,851	0/0:28,0:28:84.27:0,84,1667	0/0:18,0:18:54.19:0,54,1080	0/0:32,0:32:96.33:0,96,1933	0/0:31,0:31:93.32:0,93,1888	1/1:2,27:29:20.29:1133,20,0	0/0:18,0:18:54.19:0,54,1097	0/0:22,0:22:66.23:0,66,1341	1/1:0,27:28:81.28:1238,81,0	1/1:0,20:20:57.19:872,57,0	1/1:0,20:20:51.17:779,51,0	0/0:23,0:23:69.24:0,69,1401	0/0:25,0:25:75.26:0,75,1499	0/0:40,0:40:99:0,120,2365	0/0:22,0:22:66.23:0,66,1317	0/0:34,0:34:99:0,102,2053	1/1:0,20:20:57.19:872,57,0	0/0:8,0:8:24.08:0,24,488
chr10	85145621	.	C	CA	1115.21	PASS	AB=0.832;AC=24;AF=0.429;AN=56;BaseQRankSum=-2.582;DP=433;FS=2.537;HRun=16;HaplotypeScore=64.5016;InbreedingCoeff=-0.2023;MQ=50.57;MQ0=29;MQRankSum=-3.136;QD=3.55;ReadPosRankSum=-3.004;VQSLOD=-0.3430;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,7:19:22.94:108,0,23	1/1:7,1:5:2.99:24,3,0	0/1:12,0:6:5.27:13,0,5	0/1:7,0:5:0.09:0,0,0	0/0:18,0:22:4.22:0,4,85	0/0:12,0:14:2.19:0,2,99	0/1:11,4:14:21.88:51,0,22	0/1:17,10:24:7.56:142,0,8	1/1:5,8:12:1.19:97,1,0	0/1:15,9:24:31.25:123,0,31	0/1:12,1:14:17.46:33,0,17	0/1:5,0:10:2.54:3,0,15	0/0:5,0:8:4.01:0,4,11	0/0:6,0:10:7.84:0,8,22	0/1:8,6:14:12.50:96,0,13	0/1:8,3:11:34.07:34,0,34	0/1:8,3:12:9.12:78,0,9	1/1:5,0:15:8.18:37,8,0	0/1:16,3:16:21.03:100,0,21	0/1:11,7:19:23.92:130,0,24	1/1:4,3:6:8.97:71,9,0	0/0:5,0:18:22.29:0,22,63	0/1:11,2:13:12.42:12,0,38	0/0:9,0:12:9.57:0,10,44	0/1:19,1:23:20.76:21,0,141	0/0:14,0:15:20.59:0,21,103	0/1:13,5:17:14.12:96,0,14	0/0:15,1:14:8.18:0,8,142
chr10	85147337	.	A	ACTGGAACCACAGACGACTGGGAG	25635.19	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=7.428;DP=713;FS=4.238;HRun=0;HaplotypeScore=401.9355;InbreedingCoeff=0.9473;MQ=62.11;MQ0=0;MQRankSum=-13.533;QD=63.14;ReadPosRankSum=-5.854;VQSLOD=2.3168;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:30,2:46:18.06:1619,18,0	1/1:11,0:11:9.03:899,9,0	0/0:25,0:25:24.43:0,24,830	0/0:26,0:26:39.10:0,39,1038	0/0:15,0:15:33.09:0,33,1555	0/0:20,0:20:54.17:0,54,2748	1/1:32,0:32:42.14:3273,42,0	1/1:49,0:49:87.27:4337,87,0	1/1:22,0:22:27.01:1035,27,0	1/1:22,0:22:24.07:1365,24,0	1/1:9,0:9:3.01:176,3,0	0/0:34,0:34:69.24:0,69,3339	0/0:24,0:24:51.17:0,51,2500	0/0:32,0:32:57.15:0,57,2785	1/1:20,0:20:18.04:1195,18,0	1/1:27,0:27:30.07:2420,30,0	1/1:16,3:38:19.31:1779,19,0	0/0:30,0:30:60.05:0,60,2162	1/1:31,0:31:36.10:1836,36,0	1/1:18,0:18:18.06:1690,18,0	1/1:45,0:45:45.13:2738,45,0	0/0:23,0:23:33.11:0,33,1947	0/0:8,0:8:21.07:0,21,807	0/0:34,0:34:78.27:0,78,4066	0/0:9,0:9:18.06:0,18,1088	0/0:25,0:25:42.14:0,42,2212	1/1:36,0:36:30.10:1273,30,0	0/0:2,0:2:6.02:0,6,363
chr10	85147608	.	GGGGGGGGGCA	G	497.77	PASS	AB=0.968;AC=13;AF=0.241;AN=54;BaseQRankSum=6.014;DP=327;FS=8.941;HRun=0;HaplotypeScore=99.0706;InbreedingCoeff=0.3290;MQ=76.24;MQ0=1;MQRankSum=-5.527;QD=3.77;ReadPosRankSum=3.717;VQSLOD=1.1467;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:0:0,0,0	0/0:2,0:2:0:0,0,0	0/0:23,0:16:30.06:0,30,843	0/0:25,0:18:42.13:0,42,1140	0/0:5,0:5:12.04:0,12,493	0/0:17,0:17:33.11:0,33,1358	0/1:16,0:16:3.94:72,0,4	0/1:18,0:18:29.65:118,0,30	./.	0/1:17,4:21:33.25:169,0,33	1/1:10,0:10:7.73:53,8,0	0/0:11,0:11:30.10:0,30,915	0/0:11,0:11:24.08:0,24,817	0/0:7,0:7:18.95:0,19,541	1/1:9,0:9:3.75:33,4,0	0/0:7,0:7:2.22:0,2,11	0/1:17,0:17:63.40:63,0,99	0/0:7,0:7:15.05:0,15,759	0/0:8,0:8:2.75:0,3,99	1/1:11,0:11:8.84:84,9,0	1/1:14,0:14:2.67:8,3,0	0/0:14,0:14:33.10:0,33,1002	0/0:7,0:7:11.40:0,11,393	0/0:13,0:13:36.12:0,36,1417	0/0:12,0:12:18.54:0,19,469	0/0:7,0:7:6.02:0,6,189	0/1:16,0:16:15.59:42,0,16	0/0:4,0:4:9.03:0,9,274
chr10	85147610	.	GGGGGGGCA	G	1883.24	PASS	AB=1.000;AC=25;AF=0.463;AN=54;BaseQRankSum=4.145;DP=322;FS=18.232;HRun=0;HaplotypeScore=82.8522;InbreedingCoeff=0.7343;MQ=76.37;MQ0=1;MQRankSum=-5.011;QD=12.64;ReadPosRankSum=2.703;VQSLOD=0.3005;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:4,0:4:9.03:123,9,0	0/0:22,0:15:30.01:0,30,672	0/0:25,0:18:40.14:0,40,891	0/0:5,0:5:9.03:0,9,366	0/0:17,0:17:33.11:0,33,1074	1/1:16,2:18:18.03:250,18,0	1/1:17,0:17:34.94:376,35,0	1/1:3,0:3:3.01:37,3,0	1/1:17,0:17:10.29:205,10,0	1/1:10,0:10:9.02:110,9,0	0/0:11,0:11:30.09:0,30,636	0/0:11,0:11:21.07:0,21,590	0/0:7,0:7:18.42:0,18,375	1/1:6,1:7:5.24:110,5,0	1/1:7,0:7:3.40:18,3,0	1/1:8,10:18:1.26:277,1,0	0/0:6,0:6:15.05:0,15,618	0/1:8,0:8:27.77:105,0,28	1/1:10,0:10:8.98:139,9,0	1/1:14,0:14:2.99:36,3,0	0/0:14,0:14:33.11:0,33,755	0/0:6,0:6:10.28:0,10,305	0/0:14,0:14:36.12:0,36,1114	0/0:11,0:11:12.51:0,13,283	0/0:8,0:8:15.05:0,15,317	1/1:16,0:16:24.05:292,24,0	0/0:4,0:4:9.03:0,9,211
chr10	85147611	.	GGGGGGCA	G	2736.90	PASS	AC=26;AF=0.481;AN=54;BaseQRankSum=2.389;DP=318;FS=17.839;HRun=0;HaplotypeScore=73.8199;InbreedingCoeff=0.8375;MQ=75.19;MQ0=1;MQRankSum=-5.229;QD=18.49;ReadPosRankSum=2.086;VQSLOD=0.9115;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:5,0:5:12.04:160,12,0	0/0:21,0:14:29.80:0,30,580	0/0:23,0:17:40.12:0,40,784	0/0:5,0:5:9.50:0,10,324	0/0:17,0:17:33.11:0,33,926	1/1:7,11:18:18.05:353,18,0	1/1:3,13:16:35.39:488,35,0	1/1:3,0:3:3.01:37,3,0	1/1:15,1:16:12.59:178,13,0	1/1:4,6:10:9.02:174,9,0	0/0:11,0:11:32.60:0,33,557	0/0:11,0:11:21.07:0,21,498	0/0:7,0:7:9.99:0,10,290	1/1:2,5:7:5.17:118,5,0	1/1:7,0:7:3:32,3,0	1/1:13,5:18:18:376,18,0	0/0:6,0:6:15.05:0,15,548	1/1:9,0:9:18:292,18,0	1/1:9,0:9:9:119,9,0	1/1:6,8:14:3:68,3,0	0/0:13,0:13:33.08:0,33,627	0/0:6,0:6:9.92:0,10,264	0/0:13,0:13:36.12:0,36,962	0/0:11,0:11:9.09:0,9,216	0/0:9,0:9:18.02:0,18,323	1/1:6,10:16:24.07:547,24,0	0/0:4,0:4:9.01:0,9,166
chr10	85147612	.	GGGGGCA	G	2180.77	PASS	AC=26;AF=0.481;AN=54;BaseQRankSum=3.310;DP=307;FS=20.228;HRun=0;HaplotypeScore=68.9043;InbreedingCoeff=0.8341;MQ=75.80;MQ0=1;MQRankSum=-4.920;QD=15.80;ReadPosRankSum=1.295;VQSLOD=1.1160;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:5,0:5:12.04:160,12,0	0/0:19,0:14:10.82:0,11,431	0/0:24,0:17:38.70:0,39,653	0/0:5,0:5:8.89:0,9,281	0/0:17,0:17:33.11:0,33,808	1/1:18,0:18:18.05:256,18,0	1/1:14,0:14:36.06:443,36,0	1/1:3,0:3:3.01:37,3,0	1/1:14,0:14:13.50:168,14,0	1/1:8,0:8:9.03:128,9,0	0/0:11,0:11:32.68:0,33,447	0/0:11,0:11:21.07:0,21,412	0/0:7,0:7:18.01:0,18,268	1/1:7,0:7:5.56:89,6,0	1/1:1,6:7:3.01:62,3,0	1/1:18,0:18:18.04:271,18,0	0/0:6,0:6:15.05:0,15,478	1/1:9,0:9:18.04:251,18,0	1/1:6,0:6:9.03:114,9,0	1/1:13,0:13:3.01:45,3,0	0/0:12,0:12:33.09:0,33,531	0/0:5,0:5:9.50:0,10,225	0/0:13,0:13:36.02:0,36,814	0/0:12,0:12:12.10:0,12,218	0/0:9,0:9:15.05:0,15,287	1/1:16,0:16:24.07:362,24,0	0/0:4,0:4:6.02:0,6,115
chr10	85147614	.	GGGC	G	830.07	PASS	AC=26;AF=0.481;AN=54;BaseQRankSum=5.827;DP=286;FS=23.752;HRun=0;HaplotypeScore=57.4122;InbreedingCoeff=0.8098;MQ=76.23;MQ0=1;MQRankSum=-5.117;QD=6.86;ReadPosRankSum=1.585;VQSLOD=0.1740;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:4,0:4:11.73:71,12,0	0/0:19,1:13:29.22:0,29,301	0/0:24,0:17:41.94:0,42,388	0/0:5,0:5:12.49:0,12,207	0/0:17,0:17:33.08:0,33,484	1/1:14,0:14:17.32:101,17,0	1/1:13,0:13:29.49:193,29,0	1/1:4,0:4:2.92:17,3,0	1/1:8,2:10:11.63:72,12,0	1/1:7,1:8:8.87:57,9,0	0/0:11,0:11:1.24:0,1,112	0/0:10,0:10:20.34:0,20,171	0/0:7,0:7:6.08:0,6,112	1/1:6,0:6:5.90:37,6,0	1/1:7,0:7:2.92:17,3,0	1/1:15,0:15:17.68:111,18,0	0/0:6,0:6:15.05:0,15,318	1/1:9,0:9:20.43:120,20,0	1/1:7,0:7:11.76:71,12,0	1/1:10,0:10:2.92:17,3,0	0/0:13,0:13:33.62:0,34,221	0/0:5,0:5:9.90:0,10,133	0/0:12,0:12:36.05:0,36,471	0/0:9,0:9:12.48:0,12,152	0/0:9,0:9:17.99:0,18,182	1/1:14,0:14:23.55:147,24,0	0/0:4,0:4:8.88:0,9,62
chr10	85147615	.	GGCAGGGA	G	1897.39	PASS	AB=1.000;AC=25;AF=0.463;AN=54;BaseQRankSum=4.467;DP=282;FS=21.863;HRun=0;HaplotypeScore=68.3258;InbreedingCoeff=0.7858;MQ=77.86;MQ0=1;MQRankSum=-5.563;QD=15.94;ReadPosRankSum=0.991;VQSLOD=0.4762;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:4,0:4:11.82:77,12,0	0/0:19,0:12:26.89:0,27,642	0/0:24,0:18:44.39:0,44,930	0/0:5,0:5:12.51:0,13,409	0/0:16,0:16:33.11:0,33,1048	1/1:13,1:14:18.02:294,18,0	1/1:13,0:13:30.78:251,31,0	1/1:4,0:4:2.96:19,3,0	0/1:10,0:10:6.50:77,0,6	1/1:8,0:8:9:133,9,0	0/0:11,0:11:32.60:0,33,731	0/0:10,0:10:21.07:0,21,618	0/0:7,0:7:10.52:0,11,381	1/1:6,0:6:6.02:96,6,0	1/1:7,0:7:2.99:26,3,0	1/1:15,0:15:18.06:291,18,0	0/0:6,0:6:15.05:0,15,574	1/1:6,2:8:20.59:205,21,0	1/1:7,0:7:11.89:111,12,0	1/1:9,1:10:3.01:68,3,0	0/0:14,0:14:39.10:0,39,955	0/0:5,0:5:9.50:0,10,307	0/0:13,0:13:39.12:0,39,1164	0/0:9,0:9:12.10:0,12,309	0/0:8,0:8:15.05:0,15,413	1/1:12,1:13:24.08:451,24,0	0/0:2,0:2:6.02:0,6,161
chr10	85147616	.	GCA	G	1607.60	PASS	AC=26;AF=0.481;AN=54;BaseQRankSum=4.638;DP=279;FS=26.068;HRun=0;HaplotypeScore=49.5932;InbreedingCoeff=0.7880;MQ=78.22;MQ0=1;MQRankSum=-4.919;QD=13.62;ReadPosRankSum=1.140;VQSLOD=1.1605;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:5,0:5:15.05:202,15,0	0/0:19,0:12:1.32:0,1,249	0/0:25,0:18:20.13:0,20,404	0/0:5,0:5:12.04:0,12,189	0/0:16,0:16:33.11:0,33,482	1/1:14,0:14:17.90:142,18,0	1/1:13,0:13:36.02:416,36,0	1/1:0,4:4:3.01:37,3,0	1/1:8,1:9:12.48:140,12,0	1/1:7,0:8:8.98:82,9,0	0/0:11,0:11:31.19:0,31,288	0/0:10,0:10:15.27:0,15,229	0/0:6,0:6:5.05:0,5,172	1/1:6,0:6:5.97:43,6,0	1/1:6,0:7:2.96:22,3,0	1/1:15,0:15:17.90:130,18,0	0/0:6,0:6:18.06:0,18,290	1/1:7,1:8:21.04:267,21,0	1/1:1,6:7:11.99:132,12,0	1/1:9,0:10:2.71:21,3,0	0/0:14,0:14:35.49:0,35,435	0/0:5,0:5:8.10:0,8,138	0/0:15,0:15:44.94:0,45,649	0/0:9,0:9:11.54:0,12,171	0/0:7,0:7:15.03:0,15,238	1/1:11,0:12:23.86:174,24,0	0/0:2,0:2:3.01:0,3,45
chr10	85148529	.	CAGA	C	15167.01	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=14.703;DP=630;FS=5.876;HRun=0;HaplotypeScore=98.6139;InbreedingCoeff=0.9996;MQ=88.52;MQ0=0;MQRankSum=-9.242;QD=45.55;ReadPosRankSum=2.489;VQSLOD=6.9128;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:38:84.29:1432,84,0	1/1:0,10:10:30.10:512,30,0	0/0:26,0:26:63.18:0,63,1313	0/0:26,0:26:69.16:0,69,1377	0/0:21,0:21:63.22:0,63,1431	0/0:21,0:21:57.20:0,57,1305	1/1:2,24:26:69.23:1176,69,0	1/1:3,19:22:57.18:942,57,0	1/1:0,17:17:45.15:767,45,0	1/1:1,13:14:39.13:659,39,0	1/1:2,14:16:36.12:613,36,0	0/0:22,0:22:63.22:0,63,1432	0/0:17,0:17:51.18:0,51,1172	0/0:24,0:24:72.25:0,72,1654	1/1:0,21:21:60.21:1023,60,0	1/1:0,26:26:72.25:1228,72,0	1/1:1,25:26:69.24:1177,69,0	0/0:18,0:18:54.14:0,54,1186	1/1:2,22:24:66.20:1089,66,0	1/1:2,32:34:99:1687,99,0	1/1:1,22:24:66.23:1124,66,0	0/0:23,0:23:57.20:0,57,1311	0/0:18,0:18:51.18:0,51,1172	0/0:21,0:21:63.16:0,63,1305	0/0:21,0:21:63.22:0,63,1453	0/0:30,1:31:42.18:0,42,2017	1/1:0,35:35:99:1738,102,0	0/0:8,0:8:24.08:0,24,549
chr10	85149692	.	G	GGGTTCCC	4502.77	PASS	AB=0.889;AC=14;AF=0.250;AN=56;BaseQRankSum=4.997;DP=438;FS=47.587;HRun=0;HaplotypeScore=119.9954;InbreedingCoeff=0.7110;MQ=87.42;MQ0=0;MQRankSum=-11.001;QD=29.82;ReadPosRankSum=-5.724;VQSLOD=1.5548;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,9:18:43.51:726,44,0	0/0:3,0:3:9.03:0,9,232	0/0:15,0:15:45.13:0,45,1045	0/0:23,0:23:52.69:0,53,1084	0/0:4,0:4:12.04:0,12,315	0/0:18,0:18:51.13:0,51,1187	0/0:27,0:27:78.13:0,78,1760	1/1:20,3:23:49.17:745,49,0	0/0:18,0:18:22.11:0,22,1047	0/0:14,0:14:33.09:0,33,812	0/0:1,0:1:2.98:0,3,21	0/0:23,0:23:66.07:0,66,1358	0/0:14,0:14:42.14:0,42,1099	0/0:21,0:21:63.11:0,63,1469	0/0:10,0:10:30.09:0,30,728	0/1:10,3:14:37.17:736,0,37	0/0:29,0:29:81.17:0,81,1957	0/1:34,0:34:38.59:39,0,1176	1/1:16,2:18:28.94:608,29,0	1/1:1,1:2:3.01:97,3,0	1/1:23,11:34:70.78:1113,71,0	0/0:8,0:8:23.87:0,24,466	0/0:11,0:11:27.08:0,27,650	0/0:21,0:21:63.18:0,63,1598	0/0:7,0:7:14.99:0,15,281	0/0:17,0:17:44.85:0,45,954	1/1:5,3:8:19.60:438,20,0	0/0:3,0:3:6.02:0,6,158
chr10	85150588	.	CCAAA	C	343.17	PASS	AB=0.949;AC=15;AF=0.268;AN=56;BaseQRankSum=7.273;DP=473;FS=23.346;HRun=0;HaplotypeScore=120.6112;InbreedingCoeff=0.1946;MQ=55.89;MQ0=16;MQRankSum=-6.552;QD=2.30;ReadPosRankSum=-1.862;VQSLOD=0.5947;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:37.94:38,0,182	0/0:8,0:8:23.83:0,24,397	0/0:54,0:26:55.49:0,55,958	0/0:45,0:26:67.11:0,67,1105	0/0:8,0:8:21.05:0,21,318	0/0:12,0:12:33.08:0,33,573	0/0:27,0:26:77.56:0,78,1261	0/1:18,0:15:46.16:46,0,106	0/0:21,0:20:44.92:0,45,795	0/0:18,0:18:50.16:0,50,946	0/0:10,0:10:29.34:0,29,425	0/1:13,0:13:5.68:77,0,6	1/1:6,0:5:8.36:33,8,0	1/1:14,2:16:11.84:62,12,0	0/0:18,0:18:38.12:0,38,563	1/1:7,0:7:9.49:73,9,0	0/0:29,0:29:78.48:0,78,1514	0/1:11,0:11:17.83:18,0,168	0/1:16,0:15:46.26:46,0,87	0/1:4,0:4:8.95:9,0,23	0/1:15,0:12:37.36:37,0,68	0/1:1,6:7:7.21:41,0,7	0/0:13,0:13:30.04:0,30,538	0/0:21,0:21:57.12:0,57,1041	0/0:15,0:13:36.10:0,36,681	0/0:19,0:19:53.89:0,54,937	0/1:15,0:14:30.26:30,0,85	0/0:4,0:4:12.01:0,12,182
chr10	85150592	.	A	AG	31.09	PASS	AB=0.906;AC=6;AF=0.107;AN=56;BaseQRankSum=5.635;DP=467;FS=5.750;HRun=0;HaplotypeScore=106.5591;InbreedingCoeff=0.1945;MQ=57.61;MQ0=11;MQRankSum=-3.090;QD=0.63;ReadPosRankSum=0.508;VQSLOD=1.6195;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:50.96:0,51,590	0/0:8,0:8:24.08:0,24,331	0/0:51,1:27:60.33:0,60,913	0/0:45,0:26:75.09:0,75,972	0/0:8,0:8:21.07:0,21,289	0/0:12,0:12:33.09:0,33,440	0/0:30,0:29:84.23:0,84,1101	0/0:17,0:15:36.02:0,36,390	0/0:21,0:20:51.17:0,51,697	0/0:17,0:17:51.17:0,51,699	0/0:9,0:9:27.09:0,27,364	0/1:10,2:13:1.30:1,0,261	0/1:6,1:6:26.26:26,0,42	0/1:13,1:15:36.74:37,0,37	0/0:17,0:17:39.11:0,39,520	0/1:7,0:7:36.36:36,0,106	0/0:31,0:31:84.21:0,84,1104	0/0:12,0:12:33.06:0,33,378	0/0:16,0:15:36.06:0,36,403	0/0:4,0:4:9.02:0,9,96	0/0:14,0:11:27.08:0,27,316	1/1:6,1:7:5.93:45,6,0	0/0:11,0:11:33.10:0,33,444	0/0:21,0:21:57.19:0,57,792	0/0:15,0:13:36.12:0,36,503	0/0:18,0:18:51.16:0,51,689	0/0:14,1:14:6.39:0,6,375	0/0:4,0:4:11.63:0,12,136
chr10	85150602	.	A	AAAACACACACACAC	8437.92	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=2.120;DP=549;FS=0.000;HRun=0;HaplotypeScore=233.1260;InbreedingCoeff=0.4050;MQ=53.49;MQ0=8;MQRankSum=-9.335;QD=22.87;ReadPosRankSum=-6.510;VQSLOD=1.6431;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:71.13:915,71,0	0/1:9,0:9:78.47:78,0,190	0/0:42,0:26:49.84:0,50,555	0/0:37,0:24:71.91:0,72,690	0/0:8,0:8:19.46:0,19,402	0/0:9,0:12:27.07:0,27,846	0/1:31,0:31:99:152,0,1138	1/1:30,0:29:72.98:1466,73,0	0/1:23,0:23:71.30:71,0,1122	0/1:21,0:21:99:257,0,508	0/1:6,0:6:36.94:37,0,277	1/1:16,0:19:47.24:982,47,0	1/1:6,0:7:11.85:224,12,0	1/1:7,12:24:15.01:631,15,0	0/1:19,0:19:99:119,0,159	1/1:15,0:17:33.84:1386,34,0	0/1:37,0:35:99:142,0,1418	0/1:13,0:13:99:128,0,341	1/1:21,0:18:43.35:458,43,0	1/1:10,0:9:11.91:166,12,0	1/1:21,0:19:20.89:210,21,0	1/1:11,0:11:11.93:392,12,0	0/0:15,0:15:35.94:0,36,732	0/0:22,0:22:44.90:0,45,1622	0/0:14,0:17:36.10:0,36,1127	0/0:18,0:20:39.03:0,39,607	1/1:16,0:16:44.73:623,45,0	0/0:2,0:4:12.04:0,12,372
chr10	85151330	.	GCA	G	174.58	PASS	AB=0.970;AC=12;AF=0.214;AN=56;BaseQRankSum=7.135;DP=713;FS=2.224;HRun=0;HaplotypeScore=183.0996;InbreedingCoeff=-0.0388;MQ=54.66;MQ0=4;MQRankSum=-5.259;QD=0.72;ReadPosRankSum=1.035;VQSLOD=2.1643;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:43:16.83:0,17,129	0/0:4,0:4:5.92:0,6,39	0/0:27,0:16:24.55:0,25,385	0/0:34,0:21:25.71:0,26,442	0/1:24,2:26:18.66:19,0,625	0/1:18,5:23:90.89:91,0,621	0/1:30,0:30:5.92:6,0,33	0/1:20,0:20:1.94:2,0,58	1/1:20,0:20:12.13:64,12,0	0/1:16,0:16:33:33,0,40	0/1:20,0:20:17.13:17,0,35	0/0:22,0:20:11.97:0,12,95	0/1:16,0:16:1.12:1,0,96	0/0:30,0:30:25.24:0,25,168	0/1:24,0:23:8.57:12,0,9	0/0:24,0:24:10.95:0,11,94	0/1:29,0:29:49.15:49,0,62	0/0:34,0:35:53.90:0,54,1199	0/0:20,0:20:29.64:0,30,230	0/0:24,0:22:13.57:0,14,144	0/0:54,0:50:7.01:0,7,52	0/0:22,0:22:7.99:0,8,52	0/0:29,1:30:32.82:0,33,999	0/0:34,0:34:64.42:0,64,969	0/0:16,0:16:42.13:0,42,655	0/0:32,1:32:38.77:0,39,999	0/0:13,0:13:8.33:0,8,88	0/1:17,1:18:23.65:24,0,568
chr10	85151333	.	CACACACACACACACACGT	C	4398.22	PASS	AB=0.874;AC=16;AF=0.286;AN=56;BaseQRankSum=3.877;DP=727;FS=0.595;HRun=0;HaplotypeScore=334.3127;InbreedingCoeff=0.4123;MQ=51.33;MQ0=5;MQRankSum=-5.781;QD=16.66;ReadPosRankSum=0.869;VQSLOD=2.7770;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:49,0:44:34.54:35,0,903	1/1:4,0:4:6.02:146,6,0	0/1:26,0:15:17.38:17,0,449	0/0:31,0:18:16.15:0,16,480	0/0:26,0:26:48.16:0,48,3359	0/0:22,0:22:54.19:0,54,3318	1/1:7,22:29:14.79:529,15,0	0/1:22,0:22:17.70:18,0,469	1/1:2,19:21:18.06:874,18,0	1/1:3,13:16:31.21:1023,31,0	0/1:7,13:20:9.08:550,0,9	0/0:23,0:21:12.04:0,12,491	0/0:18,0:18:20.90:0,21,454	0/0:32,0:31:17.70:0,18,1259	1/1:11,13:23:9.03:336,9,0	0/1:23,0:23:10.91:11,0,547	0/1:13,17:30:99:861,0,103	0/0:36,0:36:87.29:0,87,4780	0/0:20,0:20:19.24:0,19,1023	0/0:24,0:22:14.04:0,14,449	0/0:61,0:52:19.80:0,20,765	0/0:22,0:22:0.40:0,0,15	0/0:29,0:29:69.24:0,69,4561	0/0:38,0:38:78.27:0,78,4839	0/0:16,0:16:42.14:0,42,2770	0/0:33,0:32:75.25:0,75,4414	0/0:14,0:14:16.71:0,17,684	0/0:18,0:18:48.16:0,48,2807
chr10	85151349	.	CGT	C	3522.12	PASS	AB=0.904;AC=34;AF=0.607;AN=56;BaseQRankSum=9.263;DP=711;FS=4.693;HRun=0;HaplotypeScore=186.1649;InbreedingCoeff=0.4971;MQ=45.85;MQ0=7;MQRankSum=-8.240;QD=7.17;ReadPosRankSum=-0.330;VQSLOD=3.0925;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:42,4:41:23.48:589,23,0	1/1:0,2:2:5.88:36,6,0	0/1:22,2:11:12.56:13,0,267	0/1:35,4:12:92.31:92,0,266	0/0:19,0:19:49.44:0,49,814	0/0:21,0:21:26.02:0,26,881	1/1:22,1:23:14.46:90,14,0	0/1:30,5:34:64.31:481,0,64	1/1:21,0:21:20.19:110,20,0	1/1:14,2:16:30.36:269,30,0	1/1:15,0:15:11.81:81,12,0	1/1:16,5:19:10.32:40,10,0	1/1:16,5:21:16.79:256,17,0	1/1:23,6:28:12.32:179,12,0	1/1:16,2:17:8.76:52,9,0	1/1:18,3:21:8.12:115,8,0	1/1:20,0:20:6.42:86,6,0	0/0:39,2:41:62.23:0,62,1585	0/1:19,5:22:48.98:334,0,49	1/1:24,2:24:11.21:182,11,0	0/1:53,4:49:26.29:160,0,26	0/1:19,1:20:7.03:140,0,7	0/0:31,0:31:83.47:0,83,1413	0/0:38,0:38:95.35:0,95,1688	0/0:21,0:21:60.20:0,60,1051	0/0:33,0:32:92.83:0,93,1570	1/1:9,3:12:14.41:217,14,0	0/0:16,0:16:22.93:0,23,720
chr10	85151350	.	GTA	G	2109.34	PASS	AB=0.978;AC=34;AF=0.607;AN=56;BaseQRankSum=11.667;DP=714;FS=10.023;HRun=0;HaplotypeScore=191.5314;InbreedingCoeff=0.5967;MQ=45.92;MQ0=7;MQRankSum=-3.919;QD=4.30;ReadPosRankSum=-5.126;VQSLOD=0.4615;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:47,0:42:63.93:416,64,0	0/0:2,0:2:0.47:0,0,1	0/1:24,0:11:9.07:9,0,170	0/1:38,1:12:39.51:40,0,178	0/0:19,0:19:49:0,49,806	0/0:21,0:21:50.08:0,50,925	1/1:23,0:23:2.88:20,3,0	1/1:35,0:34:57.71:452,58,0	1/1:21,0:21:12.93:66,13,0	1/1:16,0:16:9.69:108,10,0	1/1:15,0:15:12.88:65,13,0	0/1:21,0:19:0.07:5,0,0	1/1:21,0:21:5.47:163,5,0	1/1:29,0:28:14.42:131,14,0	1/1:18,0:17:5.64:22,6,0	1/1:20,1:21:11.66:76,12,0	1/1:20,0:20:8.77:78,9,0	0/0:42,0:42:67.16:0,67,1628	0/1:23,1:22:29.50:159,0,30	1/1:26,0:24:0.08:82,0,0	1/1:55,2:49:29.47:183,29,0	1/1:20,0:20:18.14:95,18,0	0/0:31,0:31:77.22:0,77,1442	0/0:36,2:38:84.27:0,84,1758	0/0:22,0:22:63.16:0,63,1133	0/0:33,0:32:79.65:0,80,1609	1/1:12,0:12:9.92:133,10,0	0/0:16,0:16:26.57:0,27,653
chr10	85151351	.	TAC	T	2353.09	PASS	AB=0.884;AC=25;AF=0.446;AN=56;BaseQRankSum=7.799;DP=724;FS=2.002;HRun=0;HaplotypeScore=192.8569;InbreedingCoeff=0.2617;MQ=45.89;MQ0=7;MQRankSum=-4.898;QD=5.26;ReadPosRankSum=-1.708;VQSLOD=3.1675;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,16:42:10.39:314,10,0	0/0:2,0:2:5.24:0,5,21	0/0:23,0:11:6.02:0,6,97	0/0:39,1:13:12.04:0,12,182	0/0:19,1:20:25.50:0,26,697	0/0:22,0:22:50.90:0,51,762	0/1:23,0:23:6.79:7,0,18	1/1:17,18:34:34.63:642,35,0	0/1:22,0:22:2.08:49,0,2	0/1:18,0:18:26.10:26,0,113	1/1:15,0:15:5.89:26,6,0	1/1:20,0:19:10.03:45,10,0	0/1:12,9:21:44.22:158,0,44	1/1:16,13:28:2.40:209,2,0	0/1:19,0:18:2.84:22,0,3	1/1:10,10:20:11.83:123,12,0	0/1:21,0:21:0.21:50,0,0	0/0:41,0:41:50.81:0,51,1263	0/1:19,4:22:19.89:206,0,20	0/1:14,12:24:37.14:72,0,37	1/1:31,26:50:32.73:377,33,0	0/1:12,8:20:8.87:97,0,9	0/0:31,0:31:72.24:0,72,1128	0/0:38,0:38:87.29:0,87,1380	0/0:22,0:22:54.18:0,54,859	0/0:33,1:33:47.89:0,48,1263	0/1:9,3:12:14.86:109,0,15	0/1:16,0:16:0.15:0,0,445
chr10	85151353	.	C	CACACACGT	3136	PASS	AB=0.914;AC=15;AF=0.268;AN=56;BaseQRankSum=3.991;DP=741;FS=11.331;HRun=0;HaplotypeScore=260.6183;InbreedingCoeff=0.2833;MQ=46.89;MQ0=7;MQRankSum=-2.444;QD=9.65;ReadPosRankSum=-0.358;VQSLOD=1.0226;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:48,0:43:99:191,0,157	0/0:2,0:2:6.01:0,6,62	0/0:24,0:10:21.07:0,21,329	0/0:45,0:15:27.55:0,28,436	0/0:20,0:20:51.17:0,51,1258	0/0:23,0:23:60.20:0,60,1403	0/0:23,0:23:13.66:0,14,144	0/1:35,0:34:72.19:376,0,72	0/0:22,0:22:21:0,21,333	0/0:18,0:18:33.81:0,34,471	0/0:15,0:15:15.13:0,15,168	0/1:9,11:24:5.02:493,0,5	1/1:20,1:21:21.65:467,22,0	1/1:24,1:28:20.57:555,21,0	0/0:19,0:18:8.83:0,9,112	1/1:17,1:20:4.92:220,5,0	0/0:22,0:22:28.33:0,28,395	0/0:40,0:40:95.58:0,96,2304	0/1:21,2:21:99:366,0,124	0/1:26,1:25:37.62:211,0,38	0/1:62,0:54:70.15:120,0,70	1/1:15,3:20:1.22:76,1,0	0/0:32,0:32:81.24:0,81,1990	0/0:38,0:38:96.19:0,96,2369	0/0:22,0:22:60.20:0,60,1455	0/0:35,0:34:90.31:0,90,2163	0/1:12,0:13:47.82:230,0,48	0/0:16,0:16:45.15:0,45,1076
chr10	85151372	.	G	GCA	664.77	PASS	AB=1.000;AC=4;AF=0.074;AN=54;BaseQRankSum=3.583;DP=775;FS=6.064;HRun=0;HaplotypeScore=205.4596;InbreedingCoeff=0.3133;MQ=49.48;MQ0=8;MQRankSum=-2.081;QD=10.23;ReadPosRankSum=0.378;VQSLOD=3.0191;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:39:8.20:0,8,511	./.	0/0:35,0:15:1.83:0,2,268	0/0:38,0:13:33.10:0,33,397	0/0:24,0:24:54.09:0,54,649	0/0:23,0:24:7.43:0,7,512	0/0:26,0:26:11.83:0,12,123	0/0:43,0:41:85.61:0,86,1059	0/0:25,0:25:36.11:0,36,443	0/0:29,0:29:54.13:0,54,645	0/0:13,0:13:10.81:0,11,94	0/0:25,0:23:17.96:0,18,176	0/1:18,0:18:29.23:29,0,139	0/0:27,0:27:39.54:0,40,456	0/0:20,0:21:14.88:0,15,157	0/0:22,0:22:9.35:0,9,207	0/0:28,0:28:19.72:0,20,411	1/1:18,20:39:6.49:729,6,0	0/0:21,0:19:30.32:0,30,514	0/0:26,0:24:26.81:0,27,329	0/0:66,0:59:77.72:0,78,935	0/0:23,0:23:27.02:0,27,332	0/0:32,0:32:78.23:0,78,947	0/0:41,0:41:87.27:0,87,1070	0/0:23,0:23:57.17:0,57,688	0/0:33,0:33:78.24:0,78,959	0/1:8,0:8:1.95:2,0,138	0/0:14,0:14:21.04:0,21,258
chr10	85151434	.	CAT	C	2352.54	PASS	AB=0.822;AC=12;AF=0.214;AN=56;BaseQRankSum=8.042;DP=689;FS=7.840;HRun=0;HaplotypeScore=111.7859;InbreedingCoeff=0.7743;MQ=58.83;MQ0=9;MQRankSum=4.500;QD=17.05;ReadPosRankSum=-5.180;VQSLOD=1.9938;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:28,10:36:99:311,0,997	0/0:7,0:7:18.06:0,18,365	0/0:42,0:28:69:0,69,1405	0/0:49,0:30:76.93:0,77,1369	0/0:19,0:19:56.77:0,57,994	0/0:22,0:22:66.15:0,66,1223	0/0:26,0:26:75.24:0,75,1483	0/0:95,0:89:99:0,265,4934	0/0:19,0:19:51.16:0,51,966	0/0:28,0:28:81.24:0,81,1550	0/0:16,0:16:40.40:0,40,806	0/0:15,0:14:30.10:0,30,607	0/0:14,0:14:30.08:0,30,568	0/0:7,0:7:21.07:0,21,423	0/0:25,0:25:52.90:0,53,1077	0/1:19,4:23:56.14:56,0,1025	0/0:27,0:27:69.11:0,69,1222	1/1:11,4:15:44.89:461,45,0	1/1:2,6:8:24.01:336,24,0	1/1:3,7:10:24.03:314,24,0	1/1:15,25:39:37.50:950,37,0	0/0:25,0:25:72.23:0,72,1422	0/0:17,0:17:51.14:0,51,959	0/0:35,0:35:99:0,99,1862	0/0:22,0:22:59.90:0,60,1039	0/0:27,0:27:78.24:0,78,1481	1/1:2,2:4:10.26:104,10,0	0/0:14,0:14:42.11:0,42,775
chr10	85151483	.	C	CAT	391.81	PASS	AB=0.801;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.616;DP=677;FS=8.881;HRun=0;HaplotypeScore=86.8473;InbreedingCoeff=-0.0660;MQ=48.71;MQ0=83;MQRankSum=0.725;QD=6.87;ReadPosRankSum=-4.497;VQSLOD=0.9435;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,13:41:99:357,0,738	0/0:10,0:10:30.06:0,30,396	0/0:37,0:2:6.02:0,6,80	0/0:36,0:5:11.83:0,12,88	0/0:19,0:19:56.87:0,57,788	0/0:17,0:17:48.15:0,48,758	0/0:30,0:28:84.18:0,84,1235	0/0:94,0:55:99:0,104,2145	0/0:17,0:17:48.08:0,48,673	0/0:27,0:25:69.21:0,69,1060	0/0:18,0:18:52.38:0,52,758	0/1:5,3:9:48.81:49,0,134	0/0:4,0:4:5.97:0,6,45	0/1:5,0:5:36.36:86,0,36	0/0:22,0:22:66.11:0,66,968	0/0:34,0:34:90.24:0,90,1381	0/0:21,0:20:54.18:0,54,878	0/0:26,0:26:78.08:0,78,1128	0/0:21,0:15:40.17:0,40,567	0/0:13,0:13:36.04:0,36,529	0/0:45,0:39:99:0,105,1570	0/0:9,1:8:24.06:0,24,344	0/0:12,0:11:33.11:0,33,535	0/0:36,0:36:99:0,108,1596	0/0:23,0:23:63.21:0,63,1003	0/0:29,0:27:78.12:0,78,1125	0/0:11,0:11:30.03:0,30,457	0/0:8,0:8:24.03:0,24,312
chr10	85151530	.	C	CAT	668.68	PASS	AB=0.840;AC=3;AF=0.054;AN=56;BaseQRankSum=-3.464;DP=709;FS=0.910;HRun=0;HaplotypeScore=81.9302;InbreedingCoeff=-0.0566;MQ=52.37;MQ0=57;MQRankSum=1.059;QD=7.35;ReadPosRankSum=-0.780;VQSLOD=3.0896;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:36,8:44:99:297,0,980	0/0:8,0:8:24.08:0,24,387	0/0:35,0:10:27.02:0,27,314	0/0:40,0:16:35.10:0,35,498	0/0:19,0:19:54.17:0,54,850	0/0:17,0:17:45.12:0,45,681	0/0:22,0:21:60.15:0,60,881	0/0:64,2:37:99:0,104,1368	0/0:25,0:25:69.07:0,69,961	0/0:36,0:35:99:0,105,1585	0/0:17,0:17:48.13:0,48,732	0/1:16,1:17:20.84:21,0,434	0/0:15,0:15:42.02:0,42,574	0/0:9,0:9:27.07:0,27,411	0/0:17,0:17:51.13:0,51,800	0/1:18,11:29:99:450,0,684	0/0:20,0:19:57.05:0,57,816	0/0:25,0:25:60.92:0,61,655	0/0:30,0:25:72.15:0,72,1030	0/0:17,0:17:45.14:0,45,704	0/0:53,0:50:99:0,136,2105	0/0:12,0:10:30.10:0,30,488	0/0:12,0:12:33.09:0,33,490	0/0:36,0:36:99:0,105,1678	0/0:28,0:27:75.24:0,75,1178	0/0:27,0:26:78.26:0,78,1246	0/0:19,0:19:57.07:0,57,819	0/0:13,0:13:39.09:0,39,584
chr10	85153005	.	CG	C	1456.29	PASS	AB=0.983;AC=20;AF=0.417;AN=48;BaseQRankSum=-1.401;DP=304;FS=17.922;HRun=15;HaplotypeScore=58.0603;InbreedingCoeff=0.4753;MQ=85.91;MQ0=1;MQRankSum=0.089;QD=8.57;ReadPosRankSum=5.878;VQSLOD=0.8948;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,30:39:87.11:552,87,0	0/0:4,0:4:0:0,0,0	0/1:27,1:21:16.74:17,0,61	0/0:12,0:13:5.22:0,5,56	./.	0/0:12,0:12:2.96:0,3,19	0/0:12,0:12:3.93:0,4,26	1/1:9,0:9:2.45:16,2,0	1/1:5,0:5:0.88:2,1,0	0/0:6,0:6:0:0,0,0	./.	1/1:2,10:12:29.50:189,29,0	1/1:1,8:9:17.72:115,18,0	1/1:1,14:15:38.39:247,38,0	0/0:6,0:6:2.13:0,2,14	1/1:4,14:18:8.56:168,9,0	0/0:12,0:12:22.55:0,23,118	./.	1/1:5,0:5:2.87:17,3,0	0/0:6,0:6:5.93:0,6,40	0/1:8,0:8:0:0,0,0	1/1:7,15:22:41.29:266,41,0	0/0:7,0:7:0:0,0,0	0/0:11,0:12:0:0,0,0	0/0:8,0:8:0:0,0,0	./.	0/0:6,0:6:2.95:0,3,19	0/0:6,0:6:0:0,0,0
chr10	85153138	.	AGTAAGACCAGTGAATCCCTCTGTTGTTGGACGACCTGTGGG	A	1233.26	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=4.076;DP=395;FS=3.676;HRun=0;HaplotypeScore=366.8572;InbreedingCoeff=0.7014;MQ=91.39;MQ0=0;MQRankSum=-2.087;QD=28.03;ReadPosRankSum=0.675;VQSLOD=1.3191;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:0:0,0,0	0/0:4,0:4:12.04:0,12,690	0/0:19,0:19:57.17:0,57,4098	0/0:24,0:24:68.22:0,68,4407	0/0:15,0:15:45.15:0,45,6555	0/0:22,0:22:63.22:0,63,9379	0/0:26,0:26:75.26:0,75,8671	0/0:10,0:10:30.09:0,30,2454	0/0:9,0:9:27.09:0,27,4007	0/0:14,0:14:36.12:0,36,4838	0/0:2,0:2:6.02:0,6,748	1/1:5,7:12:3.01:318,3,0	1/1:2,4:6:6.02:637,6,0	1/1:6,0:6:3.01:46,3,0	0/0:17,0:17:51.18:0,51,6706	1/1:8,0:8:3.01:46,3,0	0/0:15,0:15:42.14:0,42,5946	0/0:2,5:7:3.01:0,3,564	0/0:15,0:15:42.14:0,42,4673	0/0:14,0:14:42.14:0,42,4921	0/0:39,0:39:99:0,114,16828	1/1:0,1:1:3.01:318,3,0	0/0:13,0:13:33.11:0,33,4710	0/0:19,0:19:57.20:0,57,8049	0/0:12,0:12:36.12:0,36,4452	0/0:19,0:19:57.20:0,57,8099	0/0:18,0:18:54.19:0,54,7723	0/0:18,0:18:54.19:0,54,6998
chr10	85153272	.	G	GA	1341.49	PASS	AB=0.848;AC=17;AF=0.304;AN=56;BaseQRankSum=-3.354;DP=424;FS=2.044;HRun=11;HaplotypeScore=56.3649;InbreedingCoeff=0.4404;MQ=50.05;MQ0=30;MQRankSum=-0.666;QD=8.83;ReadPosRankSum=-0.401;VQSLOD=2.2005;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:12:2.37:0,2,7	1/1:1,2:3:6.01:61,6,0	0/0:17,0:5:4.56:0,5,15	0/0:22,0:7:4.61:0,5,16	0/0:18,0:14:17.89:0,18,136	0/0:20,0:20:43.61:0,44,318	0/1:9,15:24:19.30:212,0,19	0/0:5,0:3:2.03:0,2,6	0/1:4,6:9:8.18:107,0,8	1/1:4,9:10:3.82:211,4,0	1/1:2,8:9:15.03:150,15,0	0/1:14,0:14:0.10:0,0,0	0/0:14,0:8:1.42:0,1,5	0/1:8,0:5:0:0,0,0	1/1:12,4:15:26.98:246,27,0	0/0:10,0:8:1.56:0,2,4	1/1:5,28:33:27.83:452,28,0	1/1:8,0:7:3.46:47,3,0	0/0:7,0:6:7.95:0,8,45	0/0:6,0:5:2.04:0,2,6	0/0:15,0:10:3.91:0,4,11	0/0:8,0:5:2.39:0,2,7	0/0:12,0:13:24.84:0,25,165	0/0:35,0:34:74.67:0,75,579	0/0:17,0:16:29.86:0,30,231	0/0:25,0:26:45.82:0,46,335	0/0:14,0:12:10.18:0,10,29	0/1:12,0:12:13.34:13,0,81
chr10	85153280	.	AAAAGAAAAAAAAAAG	A	1255.93	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.668;DP=445;FS=17.881;HRun=0;HaplotypeScore=143.5757;InbreedingCoeff=0.8329;MQ=53.46;MQ0=10;MQRankSum=-2.536;QD=31.40;ReadPosRankSum=1.347;VQSLOD=2.0474;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:25:63.22:0,63,2658	0/0:4,0:4:12.04:0,12,760	0/0:20,0:6:15.02:0,15,612	0/0:19,0:10:10.91:0,11,774	0/0:17,0:14:33.07:0,33,1839	0/0:21,0:20:51.18:0,51,3236	0/0:24,0:24:54.19:0,54,3250	1/1:4,1:3:3:127,3,0	0/0:10,0:10:18.06:0,18,1204	0/0:17,0:15:42.14:0,42,2575	0/0:9,0:8:24.08:0,24,1536	0/0:17,0:17:5.88:0,6,217	0/0:13,0:7:15.05:0,15,493	0/0:12,0:10:27.09:0,27,1366	0/0:16,0:15:33.07:0,33,1899	0/0:10,0:9:21.07:0,21,1022	0/0:33,0:33:60.20:0,60,3829	0/0:9,0:8:24.08:0,24,788	1/1:1,5:5:14.85:242,15,0	1/1:0,5:5:5.99:148,6,0	1/1:5,6:9:3.86:251,4,0	0/0:14,0:12:33.11:0,33,1381	0/0:15,0:14:42.11:0,42,2290	0/0:35,0:34:93.32:0,93,5897	0/0:16,0:15:39.13:0,39,2328	0/0:27,0:26:78.27:0,78,5254	1/1:3,10:11:15.02:637,15,0	0/0:13,0:13:36.12:0,36,1985
chr10	85153281	.	AAAG	A	1272.50	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=3.313;DP=444;FS=39.750;HRun=0;HaplotypeScore=68.0329;InbreedingCoeff=0.6769;MQ=54.95;MQ0=10;MQRankSum=-7.116;QD=7.49;ReadPosRankSum=-4.691;VQSLOD=-0.4502;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,2:25:55.55:404,56,0	0/0:4,0:4:12:0,12,142	0/1:21,0:7:5.88:6,0,46	0/0:18,0:10:13.62:0,14,104	0/0:17,0:14:29.68:0,30,363	0/0:20,0:20:50.70:0,51,721	0/0:24,0:24:46.42:0,46,568	1/1:5,0:3:3.01:32,3,0	0/0:10,0:10:17.94:0,18,220	0/0:16,0:15:33.36:0,33,418	0/0:9,0:8:24.07:0,24,308	1/1:16,1:17:5.98:57,6,0	1/1:13,0:7:14.69:115,15,0	1/1:13,0:10:17.75:111,18,0	0/0:16,0:15:8.45:0,8,321	1/1:11,0:9:7.43:79,7,0	0/0:33,0:33:57.60:0,58,680	0/1:9,0:8:20.31:115,0,20	0/1:6,0:5:23.63:24,0,30	1/1:5,0:5:3.01:32,3,0	1/1:10,0:8:6.90:65,7,0	1/1:15,1:13:35.79:276,36,0	0/0:15,0:14:38:0,38,413	0/0:35,0:34:92.12:0,92,1339	0/0:16,0:15:38.96:0,39,520	0/0:27,0:26:77.42:0,77,1113	1/1:13,0:11:15.02:157,15,0	0/0:14,0:14:32.84:0,33,388
chr10	85153282	.	AAG	A	1433.36	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=2.554;DP=433;FS=47.272;HRun=0;HaplotypeScore=61.0224;InbreedingCoeff=0.6769;MQ=55.48;MQ0=10;MQRankSum=-6.694;QD=8.96;ReadPosRankSum=-4.708;VQSLOD=0.8780;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:25:58.08:420,58,0	0/0:4,0:4:11.96:0,12,108	0/1:21,0:7:20.14:20,0,23	0/0:19,0:11:9.91:0,10,75	0/0:16,0:14:29.62:0,30,295	0/0:19,0:19:50.09:0,50,580	0/0:24,0:24:46.23:0,46,427	1/1:2,0:1:3:25,3,0	0/0:10,0:10:17.81:0,18,151	0/0:15,0:15:15.21:0,15,304	0/0:9,0:8:23.97:0,24,218	1/1:1,16:17:5.96:43,6,0	1/1:10,2:6:14.86:124,15,0	1/1:12,0:9:26.48:200,26,0	0/0:17,0:16:8.11:0,8,227	1/1:10,1:9:19.09:148,19,0	0/0:33,0:33:56.78:0,57,473	0/1:9,0:8:7.44:124,0,7	0/1:6,0:5:16.82:17,0,30	1/1:5,0:5:3:25,3,0	1/1:7,0:6:5.99:49,6,0	1/1:14,2:13:35.87:317,36,0	0/0:15,0:14:36.70:0,37,336	0/0:35,0:34:92.12:0,92,1097	0/0:16,0:15:38.95:0,39,430	0/0:28,0:27:71.45:0,71,891	1/1:11,0:10:14.92:123,15,0	0/0:13,0:13:13.47:0,13,279
chr10	85153808	.	T	TA	388.47	PASS	AB=0.757;AC=6;AF=0.107;AN=56;BaseQRankSum=3.094;DP=357;FS=3.925;HRun=13;HaplotypeScore=45.5592;InbreedingCoeff=0.4590;MQ=45.75;MQ0=29;MQRankSum=-1.895;QD=7.33;ReadPosRankSum=-1.855;VQSLOD=1.4856;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,6:12:26.11:215,26,0	0/0:7,0:7:11.84:0,12,82	0/0:2,0:2:2.03:0,2,6	0/0:3,0:3:2.83:0,3,16	0/0:19,0:21:42.62:0,43,275	0/0:14,0:11:23.79:0,24,164	0/0:12,0:11:29.74:0,30,205	0/0:8,0:6:11.90:0,12,82	0/0:9,0:8:11.61:0,12,81	0/0:17,1:17:44.30:0,44,298	0/0:26,0:25:30.05:0,30,283	0/1:11,2:13:47.40:47,0,65	0/0:9,0:7:8.83:0,9,61	0/0:8,0:6:10.90:0,11,67	0/0:16,0:10:22.84:0,23,149	1/1:3,0:7:11.42:63,11,0	0/0:21,0:18:40.40:0,40,272	0/1:9,8:15:11.13:193,0,11	0/0:10,0:8:20.79:0,21,144	0/0:15,0:15:21.98:0,22,147	0/0:8,0:7:8.91:0,9,62	0/0:9,0:9:19.49:0,19,117	0/0:11,0:12:0.64:0,1,90	0/0:10,0:9:17.84:0,18,123	0/0:14,0:13:17.71:0,18,123	0/0:14,0:13:26.70:0,27,185	0/0:14,0:13:23.72:0,24,164	0/0:17,0:16:22.07:0,22,148
chr10	85153891	.	T	TTTTG	860.79	PASS	AB=1.000;AC=11;AF=0.262;AN=42;BaseQRankSum=-3.014;DP=322;FS=0.000;HRun=0;HaplotypeScore=62.5124;InbreedingCoeff=0.7425;MQ=41.40;MQ0=57;MQRankSum=-2.982;QD=10.01;ReadPosRankSum=-0.708;VQSLOD=2.1028;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:11,0:9:15.84:0,16,75	1/1:3,0:1:1.82:5,2,0	0/0:2,0:1:0:0,0,0	0/0:22,0:19:52.14:0,52,682	0/0:17,0:14:39:0,39,505	0/0:10,0:8:17.35:0,17,77	1/1:13,0:12:19.33:239,19,0	0/0:12,0:11:22.19:0,22,82	0/0:16,0:16:22.67:0,23,100	0/0:13,0:14:18.56:0,19,82	./.	./.	./.	0/0:11,0:7:7.85:0,8,33	./.	0/0:25,0:20:26.99:0,27,136	./.	1/1:15,0:11:7.55:194,8,0	0/1:18,0:16:12.52:200,0,13	1/1:10,6:7:9.03:170,9,0	./.	0/0:12,0:11:26.82:0,27,314	0/0:12,0:10:23.89:0,24,352	0/0:14,0:11:21:0,21,264	0/0:20,0:17:48.08:0,48,623	1/1:19,0:17:18.01:197,18,0	0/0:14,0:13:27.08:0,27,445
chr10	85153892	.	T	TTG	2284.90	PASS	AB=0.678;AC=22;AF=0.524;AN=42;BaseQRankSum=-2.306;DP=320;FS=2.068;HRun=0;HaplotypeScore=41.7632;InbreedingCoeff=0.5507;MQ=41.12;MQ0=57;MQRankSum=-1.015;QD=12.42;ReadPosRankSum=2.196;VQSLOD=3.2782;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,9:9:17.73:237,18,0	1/1:3,0:1:1.82:5,2,0	0/0:2,0:1:0:0,0,0	0/0:22,0:19:53.84:0,54,603	0/0:17,0:14:38.91:0,39,414	1/1:2,9:11:20.74:282,21,0	0/1:3,0:12:11.33:101,0,11	1/1:3,9:11:26.68:366,27,0	1/1:3,11:14:30.52:431,31,0	1/1:7,5:12:20.58:257,21,0	./.	./.	./.	1/1:4,7:7:9.03:128,9,0	./.	0/1:16,9:20:1.42:376,0,1	./.	0/1:13,0:11:28.09:58,0,28	0/1:6,0:16:68.93:70,0,69	1/1:14,0:6:2.96:20,3,0	./.	0/0:12,0:11:26.94:0,27,291	0/0:11,0:10:24:0,24,297	0/0:14,0:11:21:0,21,223	0/0:19,0:16:48.07:0,48,544	1/1:3,0:18:17.71:114,18,0	0/0:14,0:13:27.55:0,28,359
chr10	85153893	.	T	TG	658.67	PASS	AB=0.928;AC=14;AF=0.350;AN=40;BaseQRankSum=1.296;DP=315;FS=1.389;HRun=0;HaplotypeScore=42.6668;InbreedingCoeff=0.6871;MQ=40.55;MQ0=59;MQRankSum=-0.674;QD=6.04;ReadPosRankSum=0.034;VQSLOD=3.2461;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:10,1:9:17.08:102,17,0	./.	0/0:2,0:1:0:0,0,0	0/0:22,0:19:47.33:0,47,539	0/0:17,0:14:37.23:0,37,380	1/1:12,1:11:20.02:122,20,0	0/1:13,0:11:8.61:9,0,72	1/1:12,0:11:9.78:95,10,0	1/1:11,1:12:26.83:212,27,0	1/1:11,1:12:27.16:154,27,0	./.	./.	./.	1/1:10,0:7:7.97:34,8,0	./.	0/1:22,1:19:10.93:89,0,11	./.	0/0:15,0:10:11.80:0,12,130	0/0:14,0:14:3.26:0,3,113	0/0:16,0:6:8.43:0,8,40	./.	0/0:12,0:11:25.23:0,25,250	0/0:12,0:10:24.46:0,24,276	0/0:13,0:10:20.99:0,21,206	0/0:19,0:16:48.06:0,48,515	0/0:20,0:18:16.56:0,17,74	0/0:14,0:13:27.52:0,28,325
chr10	85155176	.	TA	T	2213.05	PASS	AB=0.963;AC=15;AF=0.278;AN=54;BaseQRankSum=10.470;DP=521;FS=5.026;HRun=8;HaplotypeScore=56.7446;InbreedingCoeff=0.9047;MQ=74.22;MQ0=1;MQRankSum=2.634;QD=16.39;ReadPosRankSum=3.331;VQSLOD=3.6985;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:63.10:607,63,0	0/0:9,0:9:24.05:0,24,268	0/0:31,0:18:31.98:0,32,282	0/1:25,0:16:26.20:26,0,30	0/0:25,0:25:72.20:0,72,846	0/0:25,0:25:60.16:0,60,702	0/0:19,0:19:54.14:0,54,626	0/0:31,0:31:84.19:0,84,942	0/0:17,0:17:39.09:0,39,447	0/0:25,0:25:72.21:0,72,848	0/0:20,0:20:54.15:0,54,640	1/1:2,12:14:30.04:289,30,0	1/1:1,19:20:45.07:434,45,0	1/1:1,10:11:24.03:231,24,0	0/0:7,0:7:18.06:0,18,217	1/1:2,12:14:30.04:289,30,0	0/0:25,0:25:72.19:0,72,844	1/1:0,14:14:35.92:341,36,0	0/0:21,0:21:63.16:0,63,720	0/0:24,0:24:69.10:0,69,770	./.	1/1:1,8:9:20.98:193,21,0	0/0:24,0:24:69.17:0,69,815	0/0:9,0:9:27.07:0,27,314	0/0:25,0:25:71.55:0,72,817	0/0:22,0:22:54.15:0,54,632	0/0:15,0:15:45.09:0,45,504	0/0:12,0:12:36.03:0,36,405
chr10	85156363	.	CTATTATTATTATTATTATTATTAT	C	1702.95	PASS	AB=0.615;AC=5;AF=0.114;AN=44;BaseQRankSum=4.386;DP=210;FS=3.014;HRun=0;HaplotypeScore=117.1124;InbreedingCoeff=0.4028;MQ=88.62;MQ0=2;MQRankSum=-3.989;QD=50.09;ReadPosRankSum=1.438;VQSLOD=2.9208;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:18.06:1068,18,0	./.	0/0:13,0:12:11.94:0,12,196	0/0:14,0:12:5.98:0,6,208	0/0:4,0:7:5.95:0,6,331	0/0:5,0:5:12.04:0,12,1120	0/0:0,0:1:3.01:0,3,133	0/0:31,0:30:48.16:0,48,2774	0/0:3,0:5:9.03:0,9,744	0/0:5,0:4:6.02:0,6,264	0/0:10,0:12:12.03:0,12,684	0/0:3,0:3:3.01:0,3,50	./.	./.	0/0:1,0:3:6.02:0,6,508	1/1:3,4:7:9.03:567,9,0	0/0:3,0:11:24.08:0,24,1950	0/1:3,5:8:40.05:183,0,40	0/0:10,0:11:12.03:0,12,359	0/0:3,0:4:6.01:0,6,280	0/0:4,0:6:6.02:0,6,509	./.	./.	./.	0/0:10,0:10:12.03:0,12,978	0/0:9,0:9:12.04:0,12,1198	0/0:1,0:5:9.03:0,9,762	0/0:7,0:7:8.96:0,9,605
chr10	85157293	.	GC	G	22877.71	PASS	AB=0.714;AC=54;AF=0.964;AN=56;BaseQRankSum=-3.480;DP=685;FS=1.508;HRun=2;HaplotypeScore=85.5687;InbreedingCoeff=-0.0330;MQ=81.66;MQ0=0;MQRankSum=-4.643;QD=33.40;ReadPosRankSum=3.616;VQSLOD=5.1165;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,46:47:99:1594,126,0	1/1:0,10:10:30.10:388,30,0	0/1:8,13:21:5.64:418,0,6	0/1:13,4:17:47.03:128,0,47	1/1:2,22:24:63.20:814,63,0	1/1:1,27:28:75.24:973,75,0	1/1:0,29:29:66.21:856,66,0	1/1:0,18:18:54.18:700,54,0	1/1:0,25:25:60.20:779,60,0	1/1:3,18:21:54.15:684,54,0	1/1:0,14:14:30.10:389,30,0	1/1:0,22:22:60.18:777,60,0	1/1:1,19:20:54.18:701,54,0	1/1:0,17:17:45.15:584,45,0	1/1:1,30:31:84.27:1089,84,0	1/1:1,19:20:54.13:681,54,0	1/1:1,44:45:99:1634,126,0	1/1:1,20:21:54.13:678,54,0	1/1:0,25:25:75.23:957,75,0	1/1:2,26:28:66.21:853,66,0	1/1:0,24:24:69.22:895,69,0	1/1:1,23:24:63.15:796,63,0	1/1:0,11:11:27.09:350,27,0	1/1:0,31:31:78.25:1012,78,0	1/1:0,20:20:54.18:700,54,0	1/1:0,33:33:99:1269,99,0	1/1:0,26:26:75.24:972,75,0	1/1:0,33:33:93.30:1205,93,0
chr10	85157537	.	T	TGTCCTTCC	17137.59	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-5.790;DP=783;FS=0.685;HRun=0;HaplotypeScore=198.5738;InbreedingCoeff=1.0000;MQ=73.84;MQ0=0;MQRankSum=-15.222;QD=71.71;ReadPosRankSum=-2.751;VQSLOD=4.2324;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,17:36:42.10:1695,42,0	0/0:13,0:13:39.13:0,39,1025	0/0:20,0:19:45.02:0,45,1024	0/0:29,0:29:60.06:0,60,1285	0/0:28,0:28:60.21:0,60,1524	0/0:21,0:21:54.17:0,54,1340	0/0:22,0:22:57.18:0,57,1384	1/1:13,21:38:81.27:2746,81,0	0/0:30,0:30:84.25:0,84,2043	0/0:38,0:38:99:0,108,2800	0/0:18,0:18:48.15:0,48,1146	0/0:26,0:26:69.24:0,69,1763	0/0:29,0:29:78.25:0,78,1831	0/0:22,0:22:60.18:0,60,1400	0/0:30,0:30:81.28:0,81,2084	1/1:10,27:38:84.29:3262,84,0	0/0:32,0:32:84.27:0,84,2179	0/0:19,0:19:42.09:0,42,915	1/1:12,11:27:73.47:2149,73,0	1/1:8,26:35:87.29:3289,87,0	1/1:16,19:36:38.97:1222,39,0	0/0:30,0:30:87.25:0,87,2133	0/0:36,0:36:99:0,99,2292	0/0:34,0:34:96.30:0,96,2320	0/0:18,0:18:51.12:0,51,1231	0/0:31,0:31:90.30:0,90,2318	1/1:10,18:29:67.47:2774,67,0	0/0:18,0:18:54.08:0,54,1274
chr10	85159052	.	T	TCCCAC	7153.28	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=1.796;DP=674;FS=2.445;HRun=0;HaplotypeScore=159.6444;InbreedingCoeff=0.9968;MQ=79.89;MQ0=0;MQRankSum=-13.408;QD=66.85;ReadPosRankSum=1.251;VQSLOD=5.9724;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,129,2608	0/0:8,0:8:21.07:0,21,441	0/0:20,0:20:28.01:0,28,895	0/0:20,0:20:18.38:0,18,808	0/0:26,0:26:75.26:0,75,1574	0/0:21,0:21:63.20:0,63,1236	0/0:28,0:28:75.24:0,75,1521	0/0:25,0:25:69.19:0,69,1248	0/0:23,0:23:60.18:0,60,1218	0/0:28,0:28:78.26:0,78,1598	0/0:29,0:29:81.26:0,81,1644	1/1:10,14:24:63.14:1564,63,0	1/1:8,8:17:45.06:1097,45,0	1/1:5,14:19:54.17:1502,54,0	0/0:23,0:23:66.21:0,66,1347	0/0:16,0:16:48.13:0,48,930	0/0:22,0:22:60.19:0,60,1192	1/1:1,15:16:36.12:1083,36,0	0/0:19,0:19:45.08:0,45,826	0/0:33,0:33:99:0,99,1873	0/0:26,0:26:75.23:0,75,1481	1/1:9,22:31:66.21:1909,66,0	0/0:37,0:37:99:0,102,2062	0/0:29,0:29:84.27:0,84,1707	0/0:25,0:24:75.22:0,75,1423	0/0:16,0:16:45.14:0,45,907	0/0:36,0:36:99:0,99,1905	0/0:9,0:9:27.09:0,27,548
chr10	85159111	.	T	TC	19539.53	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-12.239;DP=647;FS=0.319;HRun=0;HaplotypeScore=66.2299;InbreedingCoeff=0.9979;MQ=84.05;MQ0=0;MQRankSum=-3.123;QD=42.66;ReadPosRankSum=1.980;VQSLOD=5.4456;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:90.31:1437,90,0	1/1:0,11:11:26.79:400,27,0	0/0:21,0:21:60.15:0,60,793	0/0:21,0:21:57.07:0,57,752	0/0:28,0:28:84.23:0,84,1108	0/0:20,0:20:57.17:0,57,778	1/1:0,30:30:78.27:1246,78,0	1/1:0,27:27:81.25:1230,81,0	1/1:0,32:32:87.30:1390,87,0	1/1:1,27:28:78.21:1170,78,0	1/1:0,35:35:99:1570,99,0	1/1:1,25:26:66.23:1052,66,0	1/1:1,15:16:39.13:613,39,0	1/1:1,17:18:48.03:706,48,0	1/1:2,23:25:66.23:1054,66,0	1/1:0,21:21:60.20:957,60,0	1/1:1,28:29:78.27:1246,78,0	1/1:0,7:7:18.06:287,18,0	1/1:0,22:22:66.17:983,66,0	1/1:0,28:28:78.14:1187,78,0	1/1:0,21:21:60.20:959,60,0	1/1:1,16:18:51.09:760,51,0	0/0:28,0:28:84.27:0,84,1158	0/0:20,0:20:60.18:0,60,821	0/0:20,0:19:57.19:0,57,797	0/0:24,0:24:72.22:0,72,976	1/1:2,29:31:81.28:1293,81,0	0/0:7,0:7:21.07:0,21,293
chr10	85159579	.	A	AT	2297.28	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.256;DP=511;FS=8.884;HRun=9;HaplotypeScore=49.8236;InbreedingCoeff=0.9820;MQ=70.52;MQ0=1;MQRankSum=-1.451;QD=22.97;ReadPosRankSum=-3.404;VQSLOD=2.7693;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:74.96:0,75,647	0/0:5,0:5:8.99:0,9,78	0/0:15,0:13:17.85:0,18,163	0/0:18,0:17:36.24:0,36,291	0/0:20,0:20:47.98:0,48,416	0/0:22,0:23:55.99:0,56,471	0/0:14,0:14:32.98:0,33,286	1/1:6,29:35:84.21:920,84,0	0/0:23,1:24:35.81:0,36,539	0/0:23,0:23:53.76:0,54,456	0/0:10,0:10:26.99:0,27,234	0/0:22,0:22:62.56:0,63,541	0/0:14,0:14:41.96:0,42,356	0/0:22,0:22:59.97:0,60,517	0/0:20,0:20:56.98:0,57,495	0/0:20,0:20:53.96:0,54,465	0/0:31,0:31:83.98:0,84,729	0/0:16,0:16:47.99:0,48,417	1/1:9,13:22:37.33:391,37,0	1/1:1,14:15:42.11:465,42,0	1/1:2,6:8:18.05:199,18,0	0/0:12,1:13:29.98:0,30,260	0/0:10,0:10:29.99:0,30,260	0/0:17,0:16:44.95:0,45,383	0/0:14,0:14:38.99:0,39,338	0/0:16,0:16:41.96:0,42,361	1/1:3,17:20:45.12:498,45,0	0/0:14,0:14:41.99:0,42,365
chr10	85159813	.	TTATA	T	1107.53	PASS	AB=1.000;AC=17;AF=0.315;AN=54;BaseQRankSum=-1.701;DP=256;FS=3.954;HRun=0;HaplotypeScore=53.6978;InbreedingCoeff=0.5149;MQ=72.47;MQ0=6;MQRankSum=-0.582;QD=12.04;ReadPosRankSum=0.201;VQSLOD=2.0474;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:13:16.93:17,0,120	1/1:6,2:8:6.02:100,6,0	0/0:9,0:6:2.98:0,3,21	./.	0/0:8,0:8:15.02:0,15,270	0/0:17,0:18:47.83:0,48,897	1/1:1,2:3:3.01:50,3,0	0/0:33,0:33:57.14:0,57,966	1/1:4,4:8:8.90:150,9,0	1/1:2,5:7:9.02:130,9,0	1/1:6,6:11:14.97:216,15,0	0/0:7,0:7:15.02:0,15,145	0/1:6,0:6:7.98:8,0,48	0/0:6,0:6:3:0,3,28	1/1:5,3:9:9.92:152,10,0	0/1:7,0:7:7.96:8,0,105	1/1:0,17:18:27.09:449,27,0	0/0:14,0:15:20.34:0,20,228	0/0:13,0:12:24.05:0,24,347	0/0:5,0:5:11.05:0,11,146	0/0:3,0:3:9.03:0,9,169	0/0:5,0:5:3.01:0,3,31	0/0:3,0:2:3:0,3,25	0/0:3,0:3:3.01:0,3,63	0/0:5,0:5:11.89:0,12,188	0/0:1,0:6:15.04:0,15,254	0/0:10,0:10:15.03:0,15,244	0/0:5,0:6:6.02:0,6,106
chr10	85159829	.	A	ATG	606.21	PASS	AB=0.959;AC=13;AF=0.241;AN=54;BaseQRankSum=4.005;DP=253;FS=6.721;HRun=0;HaplotypeScore=48.4089;InbreedingCoeff=0.0592;MQ=63.45;MQ0=6;MQRankSum=0.702;QD=6.66;ReadPosRankSum=2.739;VQSLOD=1.8753;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:13:90.32:95,0,90	0/0:3,0:3:8.91:0,9,63	0/0:5,0:2:2.98:0,3,21	./.	0/0:8,0:8:21.04:0,21,276	0/0:18,0:18:51.08:0,51,663	0/0:2,0:2:2.96:0,3,19	0/0:28,0:28:75.37:0,75,884	0/0:7,0:7:14.85:0,15,105	0/0:7,0:7:14.89:0,15,109	0/1:10,0:9:19.81:20,0,127	1/1:7,0:7:21:186,21,0	0/1:8,0:8:6.20:107,0,6	1/1:7,0:7:14.99:126,15,0	0/0:5,0:5:14.81:0,15,100	0/1:5,7:12:28.92:114,0,29	0/0:21,0:21:35.57:0,36,241	0/1:12,0:12:19.54:20,0,77	0/0:17,0:16:35.79:0,36,281	0/0:7,0:7:4.74:0,5,16	0/1:3,0:3:7.72:8,0,17	0/1:2,0:2:18.41:19,0,18	0/0:6,0:5:12:0,12,120	0/0:4,0:4:11.97:0,12,96	0/0:9,0:9:26.76:0,27,274	0/1:9,0:9:41.28:41,0,66	0/0:8,0:8:16.13:0,16,137	0/1:7,0:6:28.48:28,0,72
chr10	85159831	.	A	ATG	431.52	PASS	AB=0.936;AC=11;AF=0.204;AN=54;BaseQRankSum=2.539;DP=256;FS=2.699;HRun=0;HaplotypeScore=49.6579;InbreedingCoeff=0.1132;MQ=63.60;MQ0=6;MQRankSum=-1.585;QD=5.39;ReadPosRankSum=4.621;VQSLOD=2.1867;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:12,2:13:60.37:64,0,60	0/0:3,0:3:8.85:0,9,59	0/0:5,0:2:2.98:0,3,21	./.	0/0:8,0:8:24.04:0,24,302	0/0:18,0:18:54.07:0,54,685	0/0:3,0:3:2.92:0,3,17	0/0:29,0:29:74.37:0,74,805	0/0:7,0:7:14.76:0,15,100	0/0:7,0:7:17.85:0,18,139	0/0:10,0:9:19.18:0,19,140	1/1:4,3:7:3.31:184,3,0	0/1:6,2:8:8.18:82,0,8	0/1:6,1:7:22.74:23,0,47	0/0:5,0:5:14.71:0,15,94	1/1:9,3:12:13.83:144,14,0	0/0:21,0:21:35.29:0,35,222	0/1:12,0:12:3.39:3,0,62	0/0:18,0:17:39.68:0,40,281	0/0:7,0:7:4.74:0,5,16	0/1:3,0:3:7.72:8,0,17	0/0:2,0:2:4.72:0,5,17	0/0:6,0:5:14.99:0,15,144	0/0:4,0:4:11.98:0,12,97	0/0:9,0:9:26.69:0,27,273	0/1:10,0:10:36.99:37,0,103	0/0:8,0:8:16.09:0,16,132	0/1:7,0:6:28.44:28,0,77
chr10	85159833	.	A	ATATG	3108	PASS	AC=24;AF=0.462;AN=52;BaseQRankSum=-1.974;DP=268;FS=0.580;HRun=0;HaplotypeScore=51.5920;InbreedingCoeff=0.9026;MQ=63.46;MQ0=5;MQRankSum=-0.123;QD=23.55;ReadPosRankSum=0.899;VQSLOD=2.9732;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:13:23.97:290,24,0	0/0:3,0:3:9.01:0,9,94	./.	./.	0/0:9,0:9:18:0,18,199	0/0:18,0:18:39.06:0,39,533	0/0:4,0:4:6.01:0,6,60	1/1:29,0:29:56.92:597,57,0	0/0:8,0:8:18.02:0,18,179	0/0:7,0:7:18.01:0,18,172	0/0:12,0:11:21.03:0,21,213	1/1:4,0:7:21.04:415,21,0	1/1:6,0:8:15.01:222,15,0	1/1:6,0:7:20.94:216,21,0	0/0:5,0:5:14.97:0,15,146	1/1:7,0:10:11.99:240,12,0	0/0:21,0:21:36.05:0,36,382	1/1:4,1:14:15.01:230,15,0	1/1:6,14:19:35.79:496,36,0	1/1:2,7:9:9.03:221,9,0	1/1:2,0:4:8.98:102,9,0	1/1:2,0:2:5.99:49,6,0	0/0:7,0:6:11.97:0,12,96	0/0:4,0:4:11.97:0,12,96	0/0:10,0:10:22.25:0,22,226	0/0:11,0:11:15.19:0,15,149	1/1:2,6:8:11.91:239,12,0	0/0:6,0:6:10.62:0,11,91
chr10	85160780	.	TCAAAGCCTTG	T	4934.15	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.449;DP=679;FS=4.116;HRun=0;HaplotypeScore=232.0698;InbreedingCoeff=0.9991;MQ=84.78;MQ0=0;MQRankSum=-12.008;QD=59.45;ReadPosRankSum=2.529;VQSLOD=4.5322;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,178,8458	0/0:10,0:10:24.06:0,24,1106	0/0:19,0:19:45.11:0,45,1893	0/0:26,0:26:54.16:0,54,2139	0/0:21,0:21:57.20:0,57,2763	0/0:20,0:20:48.15:0,48,2343	0/0:32,0:32:84.29:0,84,4037	0/0:23,0:23:57.20:0,57,2746	0/0:23,0:23:57.20:0,57,2836	0/0:22,0:22:63.22:0,63,3150	0/0:20,0:20:57.16:0,57,2592	1/1:4,26:30:54.19:1659,54,0	1/1:5,14:19:35.97:1138,36,0	1/1:4,16:20:42.14:1328,42,0	0/0:21,0:21:54.19:0,54,2543	0/0:30,0:30:81.28:0,81,3713	0/0:39,0:39:99:0,111,5407	0/0:24,0:24:63.22:0,63,3128	0/0:23,0:23:54.19:0,54,2674	0/0:26,0:26:66.23:0,66,3235	0/0:38,0:38:99:0,105,5028	1/1:3,11:14:27.09:809,27,0	0/0:22,0:22:57.20:0,57,2936	0/0:18,0:18:51.18:0,51,2562	0/0:16,0:16:45.15:0,45,2257	0/0:25,0:25:69.22:0,69,3219	0/0:22,0:22:57.20:0,57,2751	0/0:13,0:13:39.13:0,39,2012
chr10	85161722	.	T	TG	653.04	PASS	AB=0.794;AC=8;AF=0.143;AN=56;BaseQRankSum=4.091;DP=503;FS=3.305;HRun=0;HaplotypeScore=88.7822;InbreedingCoeff=0.5331;MQ=47.83;MQ0=43;MQRankSum=-1.067;QD=7.68;ReadPosRankSum=3.596;VQSLOD=3.5542;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:71.70:0,72,571	0/0:9,0:7:14.77:0,15,95	0/0:17,0:3:2.37:0,2,43	0/0:15,0:5:3.35:0,3,57	0/0:27,0:24:66.64:0,67,547	0/0:25,0:22:64.88:0,65,554	0/0:13,0:12:32.32:0,32,246	0/0:26,0:26:71.74:0,72,584	0/0:9,0:8:14.91:0,15,116	0/0:24,0:23:59.94:0,60,456	0/0:17,0:14:32.40:0,32,242	1/1:19,1:19:0.70:199,1,0	0/1:8,6:13:17.41:79,0,17	1/1:8,4:9:25.53:151,26,0	0/0:8,0:7:14.89:0,15,113	0/0:18,0:17:44.84:0,45,358	0/0:19,0:15:35.06:0,35,223	0/1:14,2:12:36.22:92,0,36	0/0:18,0:15:44.59:0,45,346	0/0:22,0:19:56.70:0,57,447	0/0:6,0:4:8.93:0,9,64	1/1:12,11:22:33.45:273,33,0	0/0:16,0:15:34.69:0,35,261	0/0:24,0:22:43.70:0,44,437	0/0:17,0:15:29.11:0,29,206	0/0:32,0:30:85.85:0,86,777	0/0:16,0:15:38.78:0,39,309	0/0:8,0:6:17.94:0,18,145
chr10	85161728	.	T	TTG	576.75	PASS	AB=0.839;AC=7;AF=0.125;AN=56;BaseQRankSum=5.728;DP=480;FS=20.844;HRun=0;HaplotypeScore=93.8498;InbreedingCoeff=0.3486;MQ=42.95;MQ0=49;MQRankSum=-1.412;QD=7.59;ReadPosRankSum=3.426;VQSLOD=1.3840;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:42.48:0,42,419	0/0:9,0:7:14.72:0,15,90	0/0:15,0:2:5.75:0,6,33	0/0:13,0:3:4.33:0,4,39	0/0:23,0:20:50.99:0,51,403	0/0:26,0:23:62.62:0,63,528	0/0:12,0:10:19.87:0,20,126	0/0:25,0:23:38.73:0,39,349	0/0:8,0:7:14.82:0,15,99	0/0:26,0:23:50.33:0,50,379	0/0:15,0:12:25.55:0,26,155	0/1:16,1:16:40.65:67,0,41	0/1:7,6:12:46.76:138,0,47	1/1:5,4:6:12.87:113,13,0	0/0:10,0:9:17.71:0,18,120	0/0:16,0:16:22.20:0,22,245	0/0:18,0:14:34.27:0,34,202	0/1:14,2:11:49.61:62,0,50	0/0:18,0:15:34.57:0,35,295	0/0:21,0:18:22.84:0,23,253	0/0:7,0:5:11.88:0,12,82	1/1:10,11:20:1.99:325,2,0	0/0:17,0:16:38.06:0,38,281	0/0:23,0:21:40.24:0,40,401	0/0:17,0:15:29.71:0,30,216	0/0:32,0:30:83.87:0,84,727	0/0:13,0:12:30.63:0,31,202	0/0:10,0:8:17.92:0,18,139
chr10	85161739	.	CT	C	1427.23	PASS	AB=0.874;AC=19;AF=0.352;AN=54;BaseQRankSum=1.309;DP=442;FS=34.781;HRun=8;HaplotypeScore=77.0436;InbreedingCoeff=0.6328;MQ=36.78;MQ0=50;MQRankSum=-3.625;QD=7.97;ReadPosRankSum=3.898;VQSLOD=-0.1988;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,17:26:42.03:404,42,0	0/0:12,0:10:13.21:0,13,100	./.	0/0:8,0:2:0:0,0,0	0/0:20,0:17:20.99:0,21,222	0/0:27,0:24:54.12:0,54,617	0/0:13,0:11:16.04:0,16,150	1/1:13,7:17:21:196,21,0	0/0:9,0:8:13.81:0,14,149	0/0:28,0:24:41.60:0,42,372	0/0:15,0:12:15.82:0,16,160	1/1:9,4:12:5.96:58,6,0	0/1:11,1:11:9.96:10,0,53	0/0:8,3:8:5.60:0,6,26	0/0:11,0:10:19.27:0,19,184	1/1:6,10:15:30.03:287,30,0	0/0:23,0:19:33.81:0,34,298	0/1:11,2:9:23.38:31,0,23	1/1:10,5:12:18:169,18,0	1/1:6,12:15:4.33:183,4,0	1/1:4,5:5:3:29,3,0	0/1:16,4:19:74.04:75,0,74	0/0:12,0:11:22.26:0,22,228	0/0:25,0:23:39.34:0,39,388	0/0:17,0:15:21.06:0,21,245	0/0:20,0:18:30.48:0,30,331	1/1:7,9:15:17.72:173,18,0	0/0:5,0:3:9.03:0,9,109
chr10	85162294	.	CTA	C	3958.91	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.012;DP=542;FS=8.325;HRun=0;HaplotypeScore=71.8769;InbreedingCoeff=0.9470;MQ=64.05;MQ0=0;MQRankSum=-1.002;QD=27.68;ReadPosRankSum=0.416;VQSLOD=4.6993;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.33:0,96,1590	0/0:7,0:7:21.07:0,21,354	1/1:8,1:8:5.80:41,6,0	0/0:6,0:5:8.77:0,9,98	0/0:29,0:29:72.09:0,72,1134	0/0:25,0:25:65.91:0,66,1104	0/0:15,0:15:30.10:0,30,506	1/1:5,25:30:75.23:952,75,0	0/0:14,0:14:7.77:0,8,576	0/0:23,0:23:54.15:0,54,872	0/0:18,0:18:48.10:0,48,777	0/0:15,0:15:42.14:0,42,706	0/0:11,0:11:24.08:0,24,393	0/0:12,0:12:30.10:0,30,493	0/0:19,0:19:44.96:0,45,756	0/0:13,0:13:21.06:0,21,329	0/0:29,0:28:72.25:0,72,1209	0/0:16,0:16:36.12:0,36,598	1/1:5,10:15:30.10:386,30,0	1/1:1,32:33:80.74:1002,81,0	1/1:3,15:18:30.10:382,30,0	0/0:11,0:11:27.09:0,27,433	0/0:19,0:19:48.16:0,48,795	0/0:9,0:9:21.07:0,21,354	0/0:26,0:26:66.23:0,66,1113	0/0:34,0:34:90.31:0,90,1505	1/1:2,36:38:93.30:1196,93,0	0/0:12,0:12:36.12:0,36,601
chr10	85163794	.	CT	C	13263.56	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=16.384;DP=746;FS=1.189;HRun=1;HaplotypeScore=81.6092;InbreedingCoeff=0.9988;MQ=93.92;MQ0=0;MQRankSum=-4.126;QD=38.45;ReadPosRankSum=2.292;VQSLOD=5.5263;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:99:1468,105,0	0/0:13,0:13:39.11:0,39,590	0/0:36,0:36:99:0,105,1550	0/0:30,0:30:84.28:0,84,1292	0/0:31,0:31:93.30:0,93,1460	0/0:21,0:21:63.21:0,63,1004	0/0:23,0:23:69.20:0,69,1055	1/1:0,21:21:63.21:880,63,0	0/0:35,0:35:99:0,105,1674	0/0:27,0:27:81.28:0,81,1295	0/0:17,0:17:51.17:0,51,815	1/1:0,31:31:84.28:1175,84,0	1/1:0,25:25:72.24:1007,72,0	1/1:0,30:30:78.26:1091,78,0	0/0:22,0:22:66.21:0,66,1033	1/1:0,14:14:36.12:503,36,0	0/0:30,0:30:90.31:0,90,1436	1/1:0,30:30:84.28:1171,84,0	1/1:0,19:19:54.18:755,54,0	1/1:0,32:32:90.23:1231,90,0	1/1:0,62:62:99:2307,166,0	1/1:0,24:24:69.23:962,69,0	0/0:24,0:24:72.23:0,72,1127	0/0:31,0:31:93.26:0,93,1413	0/0:23,0:23:69.24:0,69,1103	0/0:32,0:32:96.31:0,96,1490	1/1:0,18:18:51.17:713,51,0	0/0:6,0:6:18.06:0,18,288
chr10	85164069	.	A	AAG	6192.97	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=7.908;DP=567;FS=0.440;HRun=0;HaplotypeScore=119.4970;InbreedingCoeff=0.9085;MQ=65.66;MQ0=3;MQRankSum=-4.811;QD=15.41;ReadPosRankSum=3.041;VQSLOD=4.6082;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:45:400,45,0	1/1:2,2:5:6.02:96,6,0	0/0:29,0:23:32.48:0,32,342	0/0:33,0:28:27.19:0,27,418	0/0:22,0:22:42.05:0,42,454	0/0:13,0:13:30.08:0,30,355	1/1:3,13:17:24.08:392,24,0	1/1:38,0:37:49.64:381,50,0	1/1:3,14:18:18.06:295,18,0	1/1:3,11:14:33.06:460,33,0	1/1:7,7:14:14.90:243,15,0	1/1:16,0:16:36.01:343,36,0	1/1:22,0:22:38.95:328,39,0	1/1:13,0:13:27.02:261,27,0	1/1:20,0:20:28.75:154,29,0	1/1:14,0:14:32.91:280,33,0	1/1:6,18:24:45.15:738,45,0	1/1:24,0:24:33.01:301,33,0	1/1:16,0:16:26.35:202,26,0	1/1:36,0:37:62.55:509,63,0	1/1:20,0:18:14.06:141,14,0	1/1:22,0:22:47.66:398,48,0	0/0:15,0:15:30.10:0,30,378	0/0:24,0:24:51.15:0,51,629	0/0:16,0:16:24.02:0,24,272	0/1:20,0:20:5.78:6,0,402	1/1:19,0:17:31.24:265,31,0	0/0:13,0:13:24.03:0,24,285
chr10	85164081	.	G	GAGA	9678.95	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=11.479;DP=522;FS=3.384;HRun=0;HaplotypeScore=109.7675;InbreedingCoeff=0.6010;MQ=66.66;MQ0=13;MQRankSum=-5.139;QD=28.05;ReadPosRankSum=7.524;VQSLOD=4.8134;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:24:45.15:957,45,0	0/0:5,0:6:0.33:0,0,68	0/0:20,0:16:41.66:0,42,577	0/0:29,0:26:61.21:0,61,848	0/0:21,0:21:29.81:0,30,819	0/0:17,0:17:51.14:0,51,763	0/1:16,0:16:28.44:28,0,89	1/1:5,23:30:80.39:1148,80,0	0/1:17,0:17:22.12:22,0,79	0/1:14,0:14:26.78:54,0,27	0/1:10,0:10:19.40:19,0,34	1/1:2,14:16:36.12:760,36,0	1/1:0,19:20:39.13:826,39,0	1/1:0,12:12:27.09:562,27,0	1/1:0,0:14:23.36:80,23,0	1/1:0,13:14:33.11:675,33,0	0/1:28,0:28:57.47:57,0,214	1/1:1,15:17:33.11:706,33,0	1/1:4,10:15:35.92:570,36,0	1/1:5,24:33:63.17:1277,63,0	1/1:4,8:12:15.05:320,15,0	1/1:1,20:23:48.12:976,48,0	0/0:14,0:14:33.11:0,33,593	0/0:19,0:19:57.19:0,57,1009	0/0:14,0:14:33.10:0,33,528	0/0:22,0:22:30.15:0,30,777	1/1:1,15:15:33.09:641,33,0	0/0:15,0:15:42.06:0,42,584
chr10	85166310	.	C	CT	1869	PASS	AB=0.770;AC=27;AF=0.519;AN=52;BaseQRankSum=-4.019;DP=516;FS=1.348;HRun=12;HaplotypeScore=68.2640;InbreedingCoeff=0.5467;MQ=38.58;MQ0=61;MQRankSum=-4.844;QD=6.27;ReadPosRankSum=-1.614;VQSLOD=1.8178;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:37:31.80:0,32,230	1/1:5,6:10:7.25:71,7,0	./.	./.	0/0:24,0:27:8.25:0,8,125	0/0:19,0:14:8.47:0,8,67	1/1:9,1:7:3:29,3,0	0/1:17,8:25:1.41:279,0,1	1/1:12,6:16:18.02:171,18,0	0/1:12,5:13:3.90:121,0,4	1/1:12,16:26:27.04:261,27,0	0/0:7,0:16:16.04:0,16,46	0/0:3,0:8:4.10:0,4,17	0/0:7,0:10:12.22:0,12,35	1/1:4,5:10:14.97:134,15,0	0/1:5,5:9:0:0,0,0	1/1:15,6:19:2.14:182,2,0	0/0:28,1:25:22.76:0,23,159	1/1:14,1:11:6.01:57,6,0	1/1:16,8:22:4.12:202,4,0	0/1:10,7:16:13.88:29,0,14	0/0:7,0:12:9.73:0,10,27	0/1:23,1:19:14.30:14,0,71	0/0:19,0:15:26.62:0,27,197	0/0:17,0:17:12.84:0,13,88	1/1:14,12:22:11.14:270,11,0	1/1:12,8:15:13.80:111,14,0	1/1:12,8:15:12.02:117,12,0
chr10	85167748	.	G	GAGTC	461.07	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.336;DP=523;FS=3.291;HRun=0;HaplotypeScore=83.5038;InbreedingCoeff=0.9270;MQ=94.40;MQ0=0;MQRankSum=-3.694;QD=46.11;ReadPosRankSum=0.125;VQSLOD=3.8434;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1767	0/0:5,0:5:12.04:0,12,221	0/0:23,0:23:63.18:0,63,1095	0/0:26,0:26:60.20:0,60,1069	0/0:15,0:15:42.12:0,42,740	0/0:18,0:18:48.16:0,48,882	0/0:17,0:17:48.13:0,48,820	0/0:20,0:20:57.19:0,57,1020	0/0:23,0:23:63.22:0,63,1158	0/0:21,0:21:54.18:0,54,965	0/0:12,0:12:36.12:0,36,661	0/0:12,0:12:36.11:0,36,617	0/0:9,0:9:24.06:0,24,397	0/0:24,0:24:63.22:0,63,1152	0/0:23,0:23:57.18:0,57,1017	1/1:3,7:10:21.07:553,21,0	0/0:44,0:44:99:0,123,2263	0/0:31,0:31:81.28:0,81,1490	0/0:20,0:20:57.18:0,57,1020	0/0:25,0:25:75.22:0,75,1316	0/0:28,0:28:75.26:0,75,1380	0/0:6,0:6:18.06:0,18,331	0/0:13,0:13:36.12:0,36,648	0/0:16,0:16:39.13:0,39,718	0/0:9,0:9:24.07:0,24,411	0/0:22,0:21:54.19:0,54,993	0/0:14,0:14:36.12:0,36,662	0/0:4,0:4:12.04:0,12,221
chr10	85167918	.	A	AGTGTGT	5022.16	PASS	AB=0.698;AC=39;AF=0.750;AN=52;BaseQRankSum=4.684;DP=499;FS=0.000;HRun=0;HaplotypeScore=135.6659;InbreedingCoeff=0.7179;MQ=60.74;MQ0=10;MQRankSum=-6.686;QD=15.89;ReadPosRankSum=-4.420;VQSLOD=3.0296;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:38.51:0,39,1131	1/1:2,0:5:6.02:157,6,0	./.	./.	0/0:16,0:17:39.12:0,39,745	0/0:13,0:16:21.06:0,21,375	1/1:20,0:20:19.86:350,20,0	1/1:21,0:21:21.07:548,21,0	1/1:11,0:10:8.77:133,9,0	1/1:15,0:15:18.06:413,18,0	1/1:13,0:16:12.04:182,12,0	1/1:14,0:14:9.03:168,9,0	1/1:8,0:8:5.98:80,6,0	1/1:10,0:9:8.93:115,9,0	1/1:10,0:10:3.01:52,3,0	1/1:8,0:8:6.02:111,6,0	1/1:14,0:16:12.04:245,12,0	0/1:21,0:37:34.44:280,0,34	1/1:10,2:15:14.07:267,14,0	1/1:8,5:14:12.04:247,12,0	1/1:15,0:28:5.38:47,5,0	1/1:15,0:15:14.94:262,15,0	0/0:23,0:24:45.15:0,45,859	0/0:29,0:30:57.19:0,57,1123	0/0:22,0:22:36.59:0,37,722	1/1:16,8:25:38:829,38,0	1/1:11,3:15:9.03:264,9,0	1/1:6,2:8:9.03:271,9,0
chr10	85167950	.	TTC	T	72.96	PASS	AB=0.947;AC=9;AF=0.161;AN=56;BaseQRankSum=4.624;DP=401;FS=0.000;HRun=0;HaplotypeScore=83.9187;InbreedingCoeff=-0.2062;MQ=55.98;MQ0=4;MQRankSum=-0.174;QD=0.79;ReadPosRankSum=-5.684;VQSLOD=-0.1387;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:62.88:0,63,1356	0/0:6,0:6:14.99:0,15,155	0/0:9,0:3:3.01:0,3,39	0/1:20,0:10:26.56:27,0,48	0/0:18,0:18:46.99:0,47,625	0/0:14,0:14:29.74:0,30,443	0/1:12,2:14:40.79:41,0,260	0/0:15,0:15:40.36:0,40,508	0/0:10,0:10:2.47:0,2,283	0/1:13,0:13:17.45:17,0,419	0/1:8,0:8:20.54:21,0,139	0/1:4,2:6:34.97:36,0,35	0/0:5,0:5:12.03:0,12,166	0/0:8,0:8:11.97:0,12,155	0/0:5,0:5:9.03:0,9,133	0/0:8,0:8:11.87:0,12,166	0/0:16,0:16:24.05:0,24,331	0/0:22,0:22:44.23:0,44,530	0/0:13,0:12:28.26:0,28,333	0/1:11,0:11:9.36:9,0,214	0/0:37,1:38:62.79:0,63,917	0/1:8,1:9:40.54:41,0,79	0/0:23,0:23:68.56:0,69,1036	0/0:32,0:31:86.98:0,87,1492	0/0:17,0:16:48.15:0,48,818	0/0:17,0:16:31.87:0,32,547	0/1:6,0:7:5.95:6,0,101	0/1:3,0:3:8.94:9,0,67
chr10	85169083	.	AT	A	7332.39	PASS	AB=0.938;AC=41;AF=0.732;AN=56;BaseQRankSum=4.869;DP=498;FS=0.877;HRun=10;HaplotypeScore=67.5765;InbreedingCoeff=0.8764;MQ=74.76;MQ0=0;MQRankSum=1.040;QD=20.14;ReadPosRankSum=-0.091;VQSLOD=5.5145;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:63.09:0,63,670	1/1:0,6:6:15:130,15,0	0/0:17,0:16:20.42:0,20,206	0/1:14,1:14:12.50:12,0,134	0/0:22,1:23:31.10:0,31,571	0/0:14,0:14:30.08:0,30,332	1/1:2,12:14:29.99:260,30,0	1/1:2,15:17:44.95:383,45,0	1/1:3,14:17:41.99:365,42,0	1/1:2,20:22:56.97:495,57,0	1/1:3,18:21:50.99:443,51,0	1/1:1,14:15:41.99:365,42,0	1/1:3,12:15:35.96:309,36,0	1/1:1,13:14:38.99:338,39,0	1/1:3,11:14:32.98:286,33,0	1/1:0,13:13:32.98:286,33,0	1/1:7,21:28:65.97:573,66,0	1/1:3,21:24:62.95:542,63,0	1/1:5,24:29:65:553,65,0	1/1:2,15:17:41.98:365,42,0	1/1:2,9:11:17.99:156,18,0	1/1:1,15:16:14.81:357,15,0	0/0:15,0:15:44.87:0,45,452	0/0:21,0:20:63.16:0,63,689	0/0:16,0:15:39.06:0,39,418	1/1:6,12:18:2.80:253,3,0	1/1:2,24:26:65.98:573,66,0	1/1:0,12:12:32.99:286,33,0
chr10	85169539	.	CT	C	1563.93	PASS	AB=0.962;AC=12;AF=0.214;AN=56;BaseQRankSum=7.233;DP=599;FS=0.000;HRun=10;HaplotypeScore=65.7552;InbreedingCoeff=0.7739;MQ=70.45;MQ0=3;MQRankSum=1.315;QD=12.71;ReadPosRankSum=2.540;VQSLOD=3.4334;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:31:74.30:0,74,399	0/0:10,0:10:24.33:0,24,232	0/1:11,1:11:40.23:40,0,62	0/1:10,0:7:5.75:6,0,27	0/0:14,0:14:40.33:0,40,418	0/0:17,0:17:51.14:0,51,561	0/0:31,0:31:81.19:0,81,880	0/0:27,0:29:74.95:0,75,769	0/0:11,0:11:27.07:0,27,299	0/0:21,0:21:48.13:0,48,531	0/0:13,0:14:30.04:0,30,318	1/1:6,19:25:35.96:313,36,0	1/1:5,13:17:29.86:260,30,0	1/1:0,18:18:47.99:417,48,0	0/0:17,0:17:42.09:0,42,454	1/1:3,19:22:47.98:417,48,0	0/0:54,0:54:99:0,138,1503	0/0:31,0:30:78.19:0,78,851	0/0:25,0:25:66.17:0,66,721	0/0:20,0:20:54.12:0,54,576	0/0:25,0:24:57.14:0,57,621	1/1:0,17:18:35.02:291,35,0	0/0:16,0:16:48.05:0,48,495	0/0:28,5:34:2.87:0,3,691	0/0:17,1:19:22.07:0,22,464	0/0:28,0:28:78.19:0,78,846	0/0:18,2:20:24.87:0,25,481	0/0:9,0:9:23.99:0,24,233
chr10	85171048	.	A	AT	9519.11	PASS	AB=0.560;AC=37;AF=0.661;AN=56;BaseQRankSum=-11.276;DP=543;FS=3.243;HRun=8;HaplotypeScore=48.8927;InbreedingCoeff=0.9543;MQ=68.45;MQ0=2;MQRankSum=-2.207;QD=25.80;ReadPosRankSum=1.986;VQSLOD=5.6437;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,1:43:79.43:0,79,980	1/1:0,11:10:24.07:277,24,0	0/0:16,0:12:21.01:0,21,192	0/0:10,0:8:23.73:0,24,193	0/0:29,0:29:74.88:0,75,685	0/0:14,0:15:41.03:0,41,356	1/1:5,22:27:57.13:643,57,0	1/1:3,22:24:57.17:657,57,0	1/1:2,17:19:45.13:519,45,0	1/1:4,21:25:63.19:727,63,0	1/1:1,15:16:45.13:519,45,0	1/1:2,17:19:42.12:481,42,0	0/1:3,11:14:0.39:248,0,0	1/1:1,12:13:33.10:381,33,0	1/1:3,17:19:45.13:519,45,0	1/1:1,12:13:21.06:242,21,0	1/1:3,28:29:41.74:733,42,0	0/0:12,0:12:32.97:0,33,294	1/1:7,18:25:63.15:702,63,0	1/1:7,20:27:54.16:619,54,0	1/1:3,11:14:30.09:346,30,0	1/1:0,18:18:48.14:554,48,0	0/0:14,0:14:39.02:0,39,357	0/0:20,0:20:50.98:0,51,455	0/0:15,0:15:39.01:0,39,352	1/1:6,21:27:66.16:747,66,0	1/1:1,16:17:39.11:444,39,0	1/1:2,5:7:17.39:160,17,0
chr10	85172968	.	AT	A	3641.87	PASS	AB=0.571;AC=37;AF=0.661;AN=56;BaseQRankSum=3.502;DP=422;FS=11.668;HRun=13;HaplotypeScore=52.3548;InbreedingCoeff=0.8151;MQ=74.02;MQ0=9;MQRankSum=-0.530;QD=14.63;ReadPosRankSum=2.839;VQSLOD=3.6665;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:27.04:0,27,262	1/1:4,0:4:2.89:22,3,0	0/0:52,0:19:16.36:0,16,134	0/0:40,0:12:11.20:0,11,94	0/0:13,0:13:33.05:0,33,321	0/0:18,0:19:35.80:0,36,318	1/1:0,9:9:23.86:175,24,0	1/1:13,24:39:63.01:502,63,0	1/1:3,6:9:17.82:131,18,0	1/1:3,17:20:50.70:371,51,0	1/1:3,22:25:62.52:459,63,0	1/1:3,7:10:11.92:88,12,0	1/1:5,8:13:10.02:167,10,0	1/1:0,5:5:8.95:66,9,0	1/1:0,7:7:14.91:109,15,0	1/1:3,9:12:26.83:197,27,0	1/1:2,18:20:47.70:350,48,0	0/0:4,0:14:28.70:0,29,163	1/1:8,10:18:14.44:202,14,0	0/1:3,9:12:2.38:148,0,2	1/1:1,1:2:2.98:22,3,0	1/1:2,4:6:11.92:87,12,0	0/0:9,0:9:24.04:0,24,234	0/0:3,0:3:6.01:0,6,58	0/0:9,1:12:8.36:0,8,201	1/1:8,13:21:35.73:263,36,0	1/1:1,11:12:32.81:240,33,0	1/1:2,3:5:5.94:44,6,0
chr10	85173920	.	A	AT	4304.98	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-9.858;DP=542;FS=7.234;HRun=8;HaplotypeScore=98.9800;InbreedingCoeff=0.9821;MQ=72.21;MQ0=0;MQRankSum=0.308;QD=28.51;ReadPosRankSum=-1.316;VQSLOD=3.9148;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:57.38:0,57,505	0/0:12,0:12:35.94:0,36,318	0/0:20,0:20:10.94:0,11,357	0/0:13,0:13:16.67:0,17,165	0/0:23,1:24:19.11:0,19,412	0/0:14,0:14:29.89:0,30,255	0/0:15,0:15:44.94:0,45,399	1/1:4,21:25:38.72:689,39,0	0/0:18,0:18:41.84:0,42,357	0/0:30,0:29:71.68:0,72,623	0/0:31,0:31:77.98:0,78,703	0/0:22,0:22:59.82:0,60,516	0/0:14,0:14:36.01:0,36,327	0/0:14,0:13:38.96:0,39,347	0/0:15,0:15:41.95:0,42,374	0/0:11,0:11:30.02:0,30,274	0/0:22,0:22:56.97:0,57,511	0/0:6,0:6:15.01:0,15,137	1/1:5,12:17:14.66:423,15,0	1/1:2,37:39:99:1257,111,0	1/1:1,8:9:21.02:228,21,0	0/0:22,0:22:62.95:0,63,562	0/0:22,0:22:62.50:0,63,555	0/0:10,0:11:26:0,26,217	0/0:28,0:27:73.03:0,73,624	1/1:2,19:22:57.47:638,57,0	1/1:4,23:27:66.20:762,66,0	1/1:3,9:12:24.32:309,24,0
chr10	85174044	.	TGTC	T	1450.05	PASS	AB=1.000;AC=34;AF=0.773;AN=44;BaseQRankSum=-2.777;DP=304;FS=19.638;HRun=0;HaplotypeScore=23.5757;InbreedingCoeff=0.3916;MQ=28.67;MQ0=18;MQRankSum=3.969;QD=7.55;ReadPosRankSum=-0.697;VQSLOD=0.1556;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:8.31:123,8,0	0/0:5,0:5:0:0,0,0	0/0:30,0:3:9.03:0,9,137	0/0:32,0:2:6.02:0,6,107	./.	1/1:14,0:14:1.82:5,2,0	1/1:5,0:3:3.01:38,3,0	0/1:7,0:4:12.26:42,0,12	1/1:4,0:4:0.47:1,0,0	1/1:15,0:10:24.95:306,25,0	./.	1/1:4,0:4:0.47:1,0,0	1/1:4,0:4:0.47:1,0,0	0/1:2,0:2:0:0,0,0	./.	0/1:2,0:2:0:0,0,0	1/1:6,0:6:1.07:74,1,0	1/1:13,0:12:18.04:222,18,0	1/1:7,0:5:9.02:122,9,0	./.	./.	0/1:8,0:8:0:0,0,0	1/1:23,0:21:3.01:41,3,0	1/1:21,0:19:12.04:166,12,0	1/1:26,0:24:9.03:125,9,0	1/1:8,0:7:21.05:249,21,0	./.	1/1:2,0:2:3.01:42,3,0
chr10	85174080	.	GTC	G	257.87	PASS	AB=0.956;AC=16;AF=0.348;AN=46;BaseQRankSum=7.528;DP=475;FS=3.323;HRun=0;HaplotypeScore=84.3271;InbreedingCoeff=0.1724;MQ=33.02;MQ0=33;MQRankSum=-5.534;QD=1.41;ReadPosRankSum=0.138;VQSLOD=1.6984;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:48.11:0,48,885	0/1:11,1:12:7.04:12,0,7	0/0:29,0:3:9.02:0,9,108	0/0:30,0:2:2.98:0,3,27	0/0:22,0:22:26.71:0,27,435	0/0:13,0:13:12.04:0,12,223	1/1:15,1:13:2.51:7,3,0	0/0:10,0:9:20.65:0,21,175	1/1:16,0:16:5.75:34,6,0	0/1:21,0:18:65.64:66,0,158	./.	0/1:13,0:12:0:0,0,0	0/1:10,1:11:40.01:46,0,40	0/1:13,1:13:0:0,0,0	./.	./.	0/1:7,1:8:2.99:3,0,10	0/0:13,0:12:23.91:0,24,370	0/1:11,0:10:7.78:63,0,8	0/1:29,1:30:0.06:0,0,0	./.	./.	0/0:19,0:17:21:0,21,321	0/0:33,0:31:45.12:0,45,788	0/0:23,0:22:14.89:0,15,289	0/1:13,1:14:59.42:89,0,59	1/1:8,0:8:2.80:13,3,0	0/1:9,0:9:6.63:53,0,7
chr10	85174090	.	CTCTCTG	C	1845.99	PASS	AB=0.848;AC=16;AF=0.348;AN=46;BaseQRankSum=8.599;DP=521;FS=13.111;HRun=0;HaplotypeScore=104.5008;InbreedingCoeff=0.1912;MQ=37.62;MQ0=34;MQRankSum=-7.593;QD=11.68;ReadPosRankSum=3.043;VQSLOD=1.7205;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:54.19:0,54,1815	0/1:9,3:12:11.92:41,0,12	0/0:33,0:8:24.08:0,24,617	0/0:34,0:9:16.37:0,16,414	0/0:27,0:27:44.93:0,45,1444	0/0:14,0:14:15.05:0,15,519	1/1:16,2:16:7.92:71,8,0	0/1:10,0:7:36.04:41,0,36	1/1:16,2:17:6.31:130,6,0	0/1:16,5:20:56.33:540,0,56	./.	0/0:12,1:12:3.22:0,3,13	0/1:8,3:11:25.50:108,0,25	0/1:4,10:13:0.17:0,0,0	./.	./.	0/1:8,0:8:23.17:53,0,23	0/0:17,0:16:33.11:0,33,927	0/1:11,2:10:8.80:228,0,9	0/0:23,10:33:0.73:0,1,2	./.	./.	0/0:22,0:20:30.10:0,30,907	0/0:37,0:35:57.20:0,57,1890	0/0:24,0:23:17.90:0,18,628	0/1:15,1:16:60.07:538,0,60	1/1:0,8:8:2.91:53,3,0	1/1:6,3:9:11.38:191,11,0
chr10	85174092	.	CTCTG	C	1145.71	PASS	AB=0.896;AC=15;AF=0.326;AN=46;BaseQRankSum=8.833;DP=526;FS=2.750;HRun=0;HaplotypeScore=100.9116;InbreedingCoeff=0.2691;MQ=37.77;MQ0=36;MQRankSum=-7.377;QD=7.85;ReadPosRankSum=1.950;VQSLOD=2.5675;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:54.19:0,54,1497	0/1:11,1:12:11.93:39,0,12	0/0:36,0:8:24.07:0,24,502	0/0:37,0:9:16.76:0,17,361	0/0:29,0:29:50.87:0,51,1256	0/0:13,0:13:15.05:0,15,408	1/1:13,4:16:7.25:79,7,0	0/0:10,0:7:18.02:0,18,208	1/1:8,10:17:6.81:100,7,0	0/1:17,4:20:99:354,0,180	./.	0/0:13,0:12:2.60:0,3,10	0/1:10,1:11:23.24:36,0,23	0/1:13,1:13:0.08:0,0,0	./.	./.	0/1:8,0:8:9.86:16,0,10	0/0:18,0:17:36.08:0,36,893	0/1:10,2:10:51.31:136,0,51	0/0:30,3:33:0.33:0,0,0	./.	./.	0/0:22,0:20:30.10:0,30,768	0/0:38,0:36:60.19:0,60,1579	0/0:23,0:22:17.90:0,18,495	0/1:12,4:16:99:309,0,159	1/1:8,0:8:2.91:33,3,0	1/1:8,1:9:15.58:191,16,0
chr10	85174094	.	CTG	C	738.50	PASS	AB=0.976;AC=20;AF=0.417;AN=48;BaseQRankSum=8.672;DP=542;FS=1.672;HRun=0;HaplotypeScore=97.5267;InbreedingCoeff=0.3745;MQ=37.95;MQ0=39;MQRankSum=-6.812;QD=3.42;ReadPosRankSum=1.232;VQSLOD=1.8773;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:57.18:0,57,953	1/1:12,0:12:2.83:32,3,0	0/0:39,0:8:23.52:0,24,318	0/0:37,0:10:17.86:0,18,233	0/0:31,0:31:56.58:0,57,803	0/0:13,0:13:15.05:0,15,255	1/1:16,1:16:5.91:49,6,0	0/0:10,0:7:14.96:0,15,165	1/1:17,1:17:6.80:65,7,0	0/1:21,0:20:99:243,0,123	./.	0/1:13,0:12:0.01:0,0,0	0/1:11,0:11:17.48:47,0,17	0/1:14,0:13:0:0,0,0	./.	./.	0/1:8,0:8:3.55:14,0,4	0/0:19,0:18:39.05:0,39,579	0/1:12,0:10:57.75:90,0,58	0/1:30,3:33:0.11:0,0,0	./.	1/1:23,1:24:2.98:21,3,0	0/0:23,0:21:33.09:0,33,504	0/0:37,0:35:60.19:0,60,992	0/0:26,0:25:23.96:0,24,345	0/1:14,2:16:99:164,0,162	1/1:8,0:8:3.01:33,3,0	1/1:8,1:9:14.81:130,15,0
chr10	85174116	.	GTA	G	498.95	PASS	AB=0.941;AC=14;AF=0.259;AN=54;BaseQRankSum=9.766;DP=628;FS=3.137;HRun=0;HaplotypeScore=130.6627;InbreedingCoeff=-0.0571;MQ=42.25;MQ0=37;MQRankSum=-8.411;QD=2.76;ReadPosRankSum=0.469;VQSLOD=2.7532;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:77.72:0,78,1438	1/1:10,1:11:4.44:35,4,0	0/0:53,0:12:12.76:0,13,460	0/0:53,0:19:42.69:0,43,670	0/0:33,0:33:65.99:0,66,1178	0/0:19,0:19:30.08:0,30,504	0/1:13,1:14:9.48:9,0,25	0/0:14,0:8:11.50:0,12,100	0/1:16,3:18:12.46:48,0,12	0/1:21,0:20:67.18:125,0,67	0/0:19,2:20:5.94:0,6,47	./.	0/1:13,1:14:23.69:24,0,32	0/0:14,0:13:2.94:0,3,25	0/0:8,3:10:8.99:0,9,75	0/1:15,0:15:0.28:0,0,9	1/1:3,2:5:0.29:1,0,0	0/0:22,0:21:41.35:0,41,821	0/1:17,2:12:10.53:83,0,11	0/0:29,5:34:9.41:0,9,90	0/1:16,2:15:9.05:9,0,118	0/0:21,2:22:8.97:0,9,71	0/0:21,0:21:51.14:0,51,850	0/0:45,0:43:78.10:0,78,1330	0/0:25,0:24:28.76:0,29,491	0/1:18,3:21:92.21:255,0,92	0/1:14,0:14:14.17:14,0,69	0/1:10,0:10:11.72:35,0,12
chr10	85174134	.	CTG	C	1759.75	PASS	AB=0.921;AC=29;AF=0.518;AN=56;BaseQRankSum=8.664;DP=668;FS=1.023;HRun=0;HaplotypeScore=147.2036;InbreedingCoeff=0.4176;MQ=46.30;MQ0=36;MQRankSum=-2.273;QD=5.32;ReadPosRankSum=-0.632;VQSLOD=3.1278;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:42.10:0,42,849	1/1:6,6:12:11.90:134,12,0	0/0:48,0:12:23.27:0,23,220	0/0:76,0:22:28.26:0,28,326	0/0:31,1:32:28.04:0,28,969	0/0:21,0:21:33.10:0,33,499	1/1:11,9:19:2.38:196,2,0	0/1:18,0:13:21.41:21,0,24	1/1:9,11:19:2.85:36,3,0	1/1:13,12:23:40.39:520,40,0	1/1:9,9:19:9.24:98,9,0	0/0:5,2:7:0:0,0,0	1/1:4,7:11:17.80:176,18,0	1/1:8,8:16:2.65:36,3,0	1/1:2,3:4:9.03:109,9,0	1/1:10,12:22:17.60:175,18,0	1/1:3,4:8:11.75:111,12,0	0/0:20,0:19:31.76:0,32,664	0/1:11,0:13:11.98:40,0,12	0/1:28,0:33:25.52:26,0,90	0/1:20,0:16:14.58:15,0,34	1/1:9,15:23:18.01:199,18,0	0/0:22,1:23:20.72:0,21,766	0/0:45,0:44:43.32:0,43,1122	0/1:26,2:28:50.94:51,0,462	0/1:22,0:22:1.12:1,0,220	0/0:15,0:15:5.32:0,5,105	0/1:8,0:9:2.94:3,0,51
chr10	85174152	.	GTC	G	608.41	PASS	AB=0.993;AC=22;AF=0.393;AN=56;BaseQRankSum=6.785;DP=717;FS=36.447;HRun=0;HaplotypeScore=169.0607;InbreedingCoeff=0.0676;MQ=45.00;MQ0=50;MQRankSum=-2.465;QD=1.77;ReadPosRankSum=0.011;VQSLOD=1.3469;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:39.44:0,39,816	1/1:8,1:9:7.98:47,8,0	0/0:50,0:9:24.07:0,24,373	0/0:76,0:12:22.42:0,22,308	0/0:34,0:33:54.92:0,55,1229	0/0:22,0:22:11.10:0,11,487	0/1:24,0:23:46.73:47,0,56	0/0:20,1:14:13.41:0,13,184	0/0:21,1:21:2.51:0,3,66	0/1:28,0:25:98.86:132,0,99	1/1:16,1:15:5.75:24,6,0	0/1:12,0:12:9.30:9,0,24	0/1:14,0:14:21.05:60,0,21	0/1:14,0:14:2.36:5,0,2	0/1:7,0:7:11.65:23,0,12	1/1:26,0:25:7.32:40,7,0	0/1:12,0:12:16.28:16,0,31	0/0:22,0:22:37.92:0,38,803	1/1:17,0:11:12.20:96,12,0	0/1:36,2:35:30.14:73,0,30	0/1:34,0:26:29.98:44,0,30	1/1:25,1:25:10.80:108,11,0	0/0:24,0:24:49.32:0,49,940	0/0:49,0:46:67.71:0,68,1370	0/1:29,1:29:12.59:13,0,552	0/1:21,0:21:15.58:16,0,94	0/1:14,0:14:30.55:31,0,64	0/0:6,0:6:11.02:0,11,54
chr10	85174164	.	GTCTC	G	1670.28	PASS	AB=0.964;AC=19;AF=0.365;AN=52;BaseQRankSum=-1.942;DP=697;FS=1.211;HRun=0;HaplotypeScore=177.7638;InbreedingCoeff=0.5931;MQ=46.02;MQ0=45;MQRankSum=-0.380;QD=6.68;ReadPosRankSum=-0.772;VQSLOD=2.3504;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:41.73:0,42,473	1/1:3,5:8:14.80:163,15,0	./.	./.	0/0:30,0:29:32.62:0,33,594	0/0:20,0:22:9.56:0,10,125	1/1:21,7:27:29.71:353,30,0	0/0:24,0:16:11.76:0,12,73	1/1:11,8:19:14.91:213,15,0	1/1:22,6:28:23.41:571,23,0	1/1:10,6:15:6.40:92,6,0	0/0:13,0:17:25.27:0,25,252	0/0:16,0:17:28.50:0,28,314	0/0:13,0:14:17.73:0,18,161	1/1:5,3:9:8.94:112,9,0	0/0:24,0:28:22.88:0,23,267	1/1:10,2:14:20.95:230,21,0	0/1:18,0:19:52.15:74,0,52	0/1:15,0:8:4.48:4,0,38	0/0:35,0:33:26.67:0,27,397	0/0:34,0:30:44.70:0,45,359	0/0:23,0:25:35.09:0,35,426	0/1:19,0:20:1.63:2,0,171	0/1:42,1:43:2.47:2,0,813	0/0:28,0:28:26.42:0,26,401	0/1:24,0:23:36.31:36,0,555	0/0:13,0:14:18.46:0,18,209	0/0:6,0:6:4.98:0,5,135
chr10	85174870	.	CGT	C	4467.70	PASS	AB=0.913;AC=25;AF=0.446;AN=56;BaseQRankSum=2.738;DP=742;FS=0.000;HRun=0;HaplotypeScore=151.9444;InbreedingCoeff=0.8796;MQ=51.03;MQ0=39;MQRankSum=3.687;QD=17.38;ReadPosRankSum=2.716;VQSLOD=4.8165;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:62:99:0,146,2230	1/1:2,5:7:18.04:196,18,0	0/0:79,0:13:26.65:0,27,323	0/0:73,0:15:28.81:0,29,315	0/0:25,0:24:54.18:0,54,839	0/0:15,1:16:5.50:0,5,594	1/1:7,16:23:35.47:409,35,0	0/0:33,0:44:74.95:0,75,732	1/1:10,11:22:29.92:334,30,0	1/1:16,17:33:68.55:738,69,0	1/1:9,16:25:29.92:341,30,0	1/1:7,11:17:39.12:466,39,0	1/1:4,13:16:30.09:359,30,0	1/1:10,11:20:29.65:321,30,0	1/1:7,10:16:23.90:265,24,0	1/1:8,12:20:35.94:409,36,0	1/1:8,13:21:42.12:502,42,0	0/0:14,0:14:36.12:0,36,569	0/0:12,0:15:20.99:0,21,209	0/0:10,0:19:11.73:0,12,123	0/0:15,0:16:15.04:0,15,181	1/1:1,6:8:8.88:106,9,0	0/1:19,2:21:21.85:22,0,613	0/0:20,1:21:5.76:0,6,578	0/0:11,0:11:27.05:0,27,407	0/0:18,1:33:41.73:0,42,649	0/0:20,0:31:65.90:0,66,577	0/0:2,0:19:26.44:0,26,198
chr10	85174894	.	C	CGT	7707.22	PASS	AB=0.655;AC=36;AF=0.643;AN=56;BaseQRankSum=2.919;DP=678;FS=3.569;HRun=0;HaplotypeScore=147.3501;InbreedingCoeff=0.8288;MQ=47.56;MQ0=24;MQRankSum=-4.989;QD=20.39;ReadPosRankSum=-2.722;VQSLOD=4.7669;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:67,0:69:99:0,146,1674	1/1:1,7:8:18.06:291,18,0	0/0:60,0:14:16.20:0,16,147	0/0:60,0:17:28.75:0,29,261	0/0:20,0:20:57.17:0,57,682	0/0:18,0:18:42.12:0,42,501	1/1:9,12:21:27.03:371,27,0	1/1:18,21:38:60.16:909,60,0	1/1:3,14:17:20.70:340,21,0	1/1:12,15:26:48.16:752,48,0	1/1:11,17:28:33.08:472,33,0	1/1:6,10:16:27.09:438,27,0	1/1:4,14:17:33:449,33,0	1/1:8,8:15:11.67:192,12,0	1/1:8,9:16:18.04:266,18,0	1/1:5,10:16:18.06:289,18,0	1/1:8,14:24:39.06:596,39,0	0/0:18,0:18:39.12:0,39,476	1/1:12,4:16:17.04:164,17,0	1/1:5,11:16:15.66:205,16,0	0/1:11,5:15:21.64:155,0,22	0/1:3,9:12:30.98:42,0,31	0/0:22,0:22:51.15:0,51,611	0/0:21,0:23:53.83:0,54,587	0/0:9,0:9:18.04:0,18,208	1/1:10,19:29:60.20:953,60,0	1/1:10,15:23:32.58:512,33,0	1/1:10,4:14:23.31:310,23,0
chr10	85175441	.	G	GA	3933.81	PASS	AB=0.893;AC=28;AF=0.500;AN=56;BaseQRankSum=-7.645;DP=610;FS=0.847;HRun=10;HaplotypeScore=84.5161;InbreedingCoeff=0.7149;MQ=66.76;MQ0=7;MQRankSum=0.655;QD=11.18;ReadPosRankSum=-0.128;VQSLOD=3.1387;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:38:88.28:0,88,703	1/1:1,8:9:21.05:224,21,0	0/0:37,0:14:7:0,7,118	0/1:26,0:12:0.70:1,0,80	0/0:30,0:30:68.09:0,68,546	0/0:20,1:21:18.94:0,19,361	1/1:2,12:14:20.99:223,21,0	1/1:46,0:45:2.29:25,2,0	0/1:4,12:16:16.26:255,0,16	1/1:6,27:33:75.19:795,75,0	1/1:3,17:20:44.72:436,45,0	0/0:12,0:12:29.93:0,30,243	0/0:17,0:17:44.94:0,45,369	0/0:14,0:14:41.93:0,42,341	1/1:2,16:18:33.08:352,33,0	0/0:0,0:16:22.41:0,22,65	1/1:7,28:35:69.17:736,69,0	1/1:6,29:33:51.20:743,51,0	0/1:13,0:13:0.58:1,0,8	1/1:16,0:16:4.84:7,5,0	1/1:11,0:11:3.77:4,4,0	0/0:20,0:20:56.91:0,57,465	0/0:12,0:12:26.95:0,27,218	0/0:20,0:20:50.86:0,51,406	0/0:21,0:21:53.89:0,54,438	1/1:18,0:18:11.45:80,11,0	1/1:21,0:21:5.68:15,6,0	0/1:21,0:21:3:37,0,3
chr10	85175451	.	AG	A	4790.48	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=0.626;DP=581;FS=10.058;HRun=1;HaplotypeScore=77.7658;InbreedingCoeff=0.9804;MQ=69.14;MQ0=3;MQRankSum=-3.091;QD=34.22;ReadPosRankSum=-1.493;VQSLOD=3.3642;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:92.01:0,92,1179	0/0:9,0:9:26.50:0,26,166	0/0:29,1:17:15.09:0,15,329	0/0:18,0:11:13.14:0,13,187	0/0:29,0:29:78.22:0,78,992	0/0:19,0:19:54.05:0,54,649	0/0:12,0:12:23.58:0,24,163	1/1:3,41:44:99:1519,116,0	0/0:16,0:16:38.15:0,38,261	0/0:32,0:32:91.45:0,91,608	0/0:20,0:20:55.47:0,55,364	0/0:12,0:12:36.09:0,36,439	0/0:19,0:19:57.13:0,57,693	0/0:16,0:16:48.11:0,48,589	0/0:19,0:19:38.25:0,38,242	0/0:22,0:22:8.70:0,9,132	0/0:30,0:30:76.13:0,76,483	0/0:31,0:29:79.54:0,80,509	1/1:7,6:13:35.37:464,35,0	1/1:0,18:18:48.55:621,49,0	1/1:0,11:11:24.08:333,24,0	0/0:23,0:23:69.13:0,69,830	0/0:10,0:10:30.07:0,30,367	0/0:20,0:20:60.11:0,60,726	0/0:21,0:21:63.14:0,63,756	1/1:1,19:20:54.03:625,54,0	1/1:0,20:20:54.18:739,54,0	1/1:4,10:14:37.76:489,38,0
chr10	85177423	.	A	ACTCTCT	4668.45	PASS	AC=26;AF=0.520;AN=50;BaseQRankSum=-0.825;DP=426;FS=1.491;HRun=0;HaplotypeScore=122.5426;InbreedingCoeff=0.7733;MQ=52.30;MQ0=12;MQRankSum=-6.357;QD=23.11;ReadPosRankSum=-3.703;VQSLOD=3.6854;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:53.99:0,54,959	./.	0/0:24,0:4:6.02:0,6,93	0/0:26,0:7:10.50:0,11,128	0/0:29,0:28:51.17:0,51,1049	0/0:17,0:17:29.79:0,30,560	1/1:15,0:15:9.50:156,10,0	1/1:30,0:29:44.94:794,45,0	./.	1/1:12,11:23:57.19:1394,57,0	./.	0/0:10,0:10:12.04:0,12,171	0/0:9,0:8:9.02:0,9,113	0/0:11,0:10:14.98:0,15,185	1/1:6,5:10:3.01:87,3,0	1/1:15,0:14:7.82:81,8,0	1/1:7,2:8:3.01:53,3,0	1/1:7,0:7:9.52:122,10,0	1/1:24,0:22:24:387,24,0	1/1:13,0:12:0.47:1,0,0	1/1:7,0:6:0.47:1,0,0	0/0:8,0:8:7.27:0,7,87	0/0:5,0:5:3.01:0,3,48	0/0:10,0:10:18.47:0,18,251	0/0:17,0:17:32.36:0,32,261	1/1:7,2:19:45.15:1168,45,0	1/1:17,0:15:12.04:232,12,0	1/1:8,0:9:9.92:193,10,0
chr10	85177444	.	CTCTCTGTGTG	C	1468.68	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=2.776;DP=433;FS=0.869;HRun=0;HaplotypeScore=133.3695;InbreedingCoeff=0.4989;MQ=48.03;MQ0=15;MQRankSum=-3.441;QD=16.14;ReadPosRankSum=1.726;VQSLOD=2.7094;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:55.87:0,56,1618	./.	0/0:15,0:2:6.02:0,6,110	0/1:19,0:7:14.65:15,0,123	0/0:31,0:30:63.17:0,63,2154	0/0:19,0:19:37.30:0,37,571	0/0:17,0:17:9.03:0,9,138	0/0:28,0:27:81.25:0,81,1183	0/1:10,0:10:60.87:111,0,61	0/0:22,0:21:63.22:0,63,2259	0/0:16,0:16:3.01:0,3,31	1/1:5,7:12:12.04:370,12,0	1/1:6,8:13:12.04:353,12,0	1/1:5,11:17:18.53:556,19,0	0/0:17,0:14:8.71:0,9,177	0/0:17,0:16:24.01:0,24,577	0/0:9,0:7:10.42:0,10,145	0/1:7,0:7:19.11:19,0,218	0/0:16,0:14:33.10:0,33,679	0/0:13,0:11:12.02:0,12,132	0/0:6,0:5:0.89:0,1,2	1/1:3,8:11:5.97:202,6,0	0/0:4,0:4:6.02:0,6,231	0/0:13,0:12:17.73:0,18,559	0/0:21,0:21:31.51:0,32,1141	0/0:19,0:18:54.18:0,54,1667	0/0:13,0:10:15.52:0,16,243	0/0:7,0:6:9.86:0,10,286
chr10	85178075	.	CGAGAGGGAT	C	1342.47	PASS	AB=0.515;AC=1;AF=0.018;AN=56;BaseQRankSum=6.149;DP=644;FS=7.209;HRun=0;HaplotypeScore=171.4946;InbreedingCoeff=-0.0185;MQ=83.41;MQ0=0;MQRankSum=-6.580;QD=78.97;ReadPosRankSum=2.117;VQSLOD=3.2140;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,5533	0/0:9,0:9:27.09:0,27,1365	0/0:16,0:16:48.16:0,48,2051	0/0:25,0:25:75.26:0,75,3323	0/0:28,0:28:81.28:0,81,3950	0/0:30,0:30:90.31:0,90,4265	0/0:28,0:28:84.29:0,84,4193	0/0:26,0:26:75.16:0,75,3397	0/0:26,0:26:78.17:0,78,3651	0/0:23,0:23:69.24:0,69,3464	0/0:13,0:13:39.13:0,39,1843	0/0:18,0:18:54.19:0,54,2718	0/0:20,0:20:60.10:0,60,2682	0/0:19,0:19:57.20:0,57,2676	0/0:27,0:27:75.26:0,75,3700	0/1:1,16:17:99:1417,0,104	0/0:29,0:29:81.28:0,81,3937	0/0:23,0:23:60.16:0,60,2775	0/0:25,0:25:75.15:0,75,3521	0/0:22,0:22:66.23:0,66,3190	0/0:41,0:41:99:0,120,5942	0/0:15,0:15:45.15:0,45,2278	0/0:19,0:19:57.20:0,57,2796	0/0:41,0:41:99:0,123,6053	0/0:16,0:16:45.14:0,45,2136	0/0:27,0:27:78.25:0,78,3571	0/0:17,0:17:51.11:0,51,2432	0/0:6,0:6:18.06:0,18,892
chr10	85178567	.	TTGATGGTGGTGATGG	T	5403.80	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.364;DP=818;FS=9.787;HRun=0;HaplotypeScore=328.0284;InbreedingCoeff=0.9911;MQ=58.96;MQ0=5;MQRankSum=-9.510;QD=47.82;ReadPosRankSum=0.800;VQSLOD=3.0014;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:60:99:0,132,6057	0/0:9,0:9:15.05:0,15,975	0/0:32,0:23:34.70:0,35,621	0/0:31,0:19:29.88:0,30,608	0/0:19,0:19:45.15:0,45,2103	0/0:31,0:31:63.19:0,63,2859	0/0:31,0:31:72.25:0,72,3065	0/0:27,0:27:45.12:0,45,1105	0/0:31,0:31:63.21:0,63,2847	0/0:37,0:37:78.24:0,78,3140	0/0:18,0:18:36.12:0,36,1413	1/1:6,19:25:36.12:1398,36,0	1/1:3,19:22:30.09:1140,30,0	1/1:8,21:29:47.49:1943,47,0	0/0:34,0:34:84.26:0,84,4098	0/0:37,0:36:87.02:0,87,1984	0/0:36,0:36:84.26:0,84,3872	1/1:9,9:18:21.04:650,21,0	0/0:20,0:19:42.13:0,42,1441	0/0:24,0:23:48.13:0,48,1654	0/0:60,0:60:99:0,129,5707	1/1:8,11:19:14.98:272,15,0	0/0:19,0:19:39.12:0,39,1898	0/0:58,0:58:99:0,142,7069	0/0:20,0:20:45.15:0,45,2215	0/0:36,0:36:87.24:0,87,3317	0/0:21,0:20:63.17:0,63,3321	0/0:13,0:13:30.10:0,30,1192
chr10	85178573	.	G	GTGGTGA	2832.12	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.327;DP=839;FS=2.299;HRun=0;HaplotypeScore=217.2787;InbreedingCoeff=0.7410;MQ=56.70;MQ0=7;MQRankSum=-7.561;QD=67.43;ReadPosRankSum=0.249;VQSLOD=3.5358;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:53:99:0,132,2568	0/0:9,0:8:17.99:0,18,340	0/0:41,0:22:24.38:0,24,395	0/0:39,0:18:32.94:0,33,439	0/0:21,0:21:51.10:0,51,912	0/0:30,0:30:54.58:0,55,1022	0/0:34,0:34:81.18:0,81,1431	0/0:28,0:27:39.97:0,40,616	0/0:29,0:29:57.17:0,57,1146	0/0:43,0:43:78.25:0,78,1503	0/0:18,0:18:39.10:0,39,702	0/0:21,0:21:3.66:0,4,116	0/0:21,0:21:26.44:0,26,162	0/0:27,0:27:37.69:0,38,196	0/0:34,0:33:75.25:0,75,1524	1/1:1,41:41:90.31:2927,90,0	0/0:37,0:37:74.18:0,74,1535	0/0:17,0:17:21.49:0,21,181	0/0:23,0:22:45.01:0,45,706	0/0:24,0:23:49.37:0,49,850	0/0:62,0:61:99:0,138,2483	0/0:16,0:16:2.90:0,3,16	0/0:19,0:19:36.12:0,36,747	0/0:58,0:58:99:0,132,2697	0/0:18,0:18:48.16:0,48,962	0/0:36,0:35:78.22:0,78,1464	0/0:24,0:23:66.15:0,66,1215	0/0:13,0:13:27.56:0,28,546
chr10	85178624	.	G	GTGGTGA	4858.40	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=10.469;DP=924;FS=29.599;HRun=0;HaplotypeScore=228.4214;InbreedingCoeff=0.8019;MQ=44.09;MQ0=90;MQRankSum=-9.585;QD=12.89;ReadPosRankSum=-0.834;VQSLOD=2.7894;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:47:81.02:0,81,1316	1/1:11,0:8:6.53:81,7,0	0/0:39,0:6:0:0,0,0	0/0:52,0:6:3:0,3,26	0/0:15,0:13:24:0,24,325	0/0:25,0:23:44.21:0,44,750	1/1:60,0:48:42.65:329,43,0	0/0:37,0:29:41.85:0,42,339	1/1:38,0:36:0.09:127,0,0	1/1:42,0:35:6.72:319,7,0	1/1:10,0:10:3:25,3,0	1/1:33,6:39:79.65:1192,80,0	1/1:23,4:25:44.63:735,45,0	1/1:38,3:39:71.53:920,72,0	1/1:38,0:36:47.11:444,47,0	0/0:40,0:39:47.12:0,47,329	1/1:29,0:29:46.03:423,46,0	1/1:24,0:23:4.60:72,5,0	0/0:36,0:21:17.65:0,18,168	0/0:12,0:11:11.88:0,12,241	0/0:89,0:75:99:0,129,1767	1/1:17,1:16:14.49:192,14,0	0/0:14,0:12:26.99:0,27,358	0/0:47,0:47:68.23:0,68,1418	0/0:19,0:15:24.05:0,24,361	0/0:39,0:33:29.81:0,30,605	0/0:23,0:23:48.01:0,48,662	0/0:11,0:8:0.10:0,0,258
chr10	85178654	.	GTGA	G	1599.07	PASS	AB=0.890;AC=12;AF=0.231;AN=52;BaseQRankSum=12.118;DP=752;FS=20.338;HRun=0;HaplotypeScore=153.3517;InbreedingCoeff=-0.2915;MQ=43.22;MQ0=74;MQRankSum=-9.153;QD=4.44;ReadPosRankSum=-0.412;VQSLOD=1.4944;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:81.70:0,82,1246	0/1:9,1:8:2.05:2,0,146	./.	./.	0/0:13,0:11:24.07:0,24,496	0/0:29,0:27:52.92:0,53,884	0/1:41,12:40:99:108,0,675	0/0:29,0:17:38.97:0,39,453	0/1:27,12:34:99:127,0,817	0/1:20,14:28:99:437,0,323	0/0:6,3:7:6.01:0,6,91	0/1:38,0:36:50.94:51,0,638	0/1:27,0:25:82.16:82,0,341	0/1:36,0:34:88.84:89,0,510	0/1:21,10:27:99:434,0,355	0/1:23,0:19:57.98:58,0,65	0/1:30,2:32:99:151,0,597	0/1:16,6:21:99:195,0,468	0/0:28,0:16:25.87:0,26,373	0/0:12,0:11:17.96:0,18,326	0/0:87,0:75:99:0,115,1868	0/1:15,0:13:6.87:7,0,153	0/0:14,0:14:31.84:0,32,568	0/0:47,0:46:74.49:0,74,1642	0/0:16,0:13:27.37:0,27,469	0/0:33,0:28:33.82:0,34,774	0/0:18,0:18:45.07:0,45,689	0/0:14,0:11:11.45:0,11,327
chr10	85179659	.	CT	C	3068.81	PASS	AB=0.905;AC=13;AF=0.232;AN=56;BaseQRankSum=9.371;DP=561;FS=1.909;HRun=4;HaplotypeScore=58.6061;InbreedingCoeff=0.9009;MQ=85.93;MQ0=0;MQRankSum=-1.630;QD=23.98;ReadPosRankSum=1.198;VQSLOD=2.5897;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.27:0,84,1158	1/1:0,11:11:26.86:323,27,0	0/0:19,0:19:47.69:0,48,690	0/0:27,0:26:68.95:0,69,864	0/0:16,0:16:45.15:0,45,629	0/0:15,0:14:45.15:0,45,630	1/1:1,17:18:39.12:468,39,0	0/0:32,0:31:78.21:0,78,1028	0/0:25,0:25:72.23:0,72,991	1/1:1,18:19:51.12:580,51,0	1/1:0,14:14:39.12:468,39,0	0/0:20,0:20:54.17:0,54,740	0/0:17,0:17:51.17:0,51,714	0/0:18,0:18:51.17:0,51,714	1/1:1,16:17:48.15:576,48,0	0/0:26,0:26:75.24:0,75,1034	1/1:2,28:30:69.21:828,69,0	0/0:13,0:12:36.09:0,36,482	0/0:23,0:23:57.17:0,57,767	0/0:17,0:17:48.14:0,48,640	0/0:33,0:33:96.27:0,96,1287	0/0:13,0:13:39.12:0,39,529	0/0:19,0:19:57.15:0,57,747	0/0:15,0:15:45.15:0,45,629	0/0:19,0:19:57.18:0,57,780	0/1:17,2:19:17.84:18,0,603	0/0:26,0:26:72.22:0,72,990	0/0:9,0:9:27.09:0,27,378
chr10	85179786	.	C	CG	1743.95	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-3.464;DP=394;FS=20.737;HRun=3;HaplotypeScore=69.0314;InbreedingCoeff=0.9086;MQ=58.84;MQ0=11;MQRankSum=0.137;QD=22.36;ReadPosRankSum=0.906;VQSLOD=2.1472;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:46.83:0,47,504	0/0:4,0:4:5.18:0,5,26	0/0:10,0:4:1.24:0,1,3	0/0:10,1:10:8.22:0,8,70	0/0:14,0:14:25.98:0,26,236	0/0:11,0:11:29.94:0,30,321	0/0:17,0:16:20.69:0,21,116	0/0:21,0:18:26.64:0,27,197	1/1:8,1:8:12.21:77,12,0	0/0:20,0:20:35.56:0,36,206	0/0:10,0:10:16.50:0,17,91	1/1:9,7:16:33.66:339,34,0	1/1:3,5:7:17.99:224,18,0	1/1:7,9:16:41.74:434,42,0	0/0:11,0:10:20.28:0,20,116	0/0:13,0:14:32.71:0,33,324	0/0:22,0:22:36.01:0,36,210	1/1:5,11:14:39.05:475,39,0	0/0:14,0:13:32.07:0,32,242	0/0:8,0:8:14.92:0,15,131	0/0:13,0:12:23.84:0,24,183	1/1:3,9:13:35.84:377,36,0	0/0:11,0:10:20.81:0,21,198	0/0:21,0:21:44.06:0,44,469	0/0:8,0:8:17.03:0,17,156	0/0:16,0:16:39.32:0,39,309	0/0:28,0:26:59.55:0,60,457	0/0:8,0:8:14.29:0,14,95
chr10	85179789	.	GA	G	768.30	PASS	AB=0.767;AC=14;AF=0.250;AN=56;BaseQRankSum=-4.223;DP=415;FS=12.879;HRun=13;HaplotypeScore=77.1997;InbreedingCoeff=0.5666;MQ=58.48;MQ0=11;MQRankSum=2.012;QD=5.78;ReadPosRankSum=0.653;VQSLOD=0.9737;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:33.44:0,33,438	0/0:3,0:4:8.65:0,9,49	0/0:13,0:7:11.77:0,12,81	0/0:12,1:10:10.59:0,11,62	0/1:11,3:15:16.88:17,0,153	0/0:12,0:11:27.03:0,27,258	0/0:8,0:19:25.68:0,26,134	1/1:6,15:18:28.87:183,29,0	0/1:11,0:10:13.11:13,0,93	0/0:16,0:22:28.18:0,28,162	0/0:4,0:10:17.19:0,17,92	0/0:14,0:15:27.69:0,28,182	0/0:8,0:7:14.68:0,15,89	0/0:16,0:16:35.32:0,35,233	0/0:12,0:14:28.66:0,29,149	0/0:16,0:16:39.37:0,39,313	0/0:14,0:23:38.36:0,38,279	0/0:16,0:15:41.07:0,41,254	1/1:4,10:14:11.29:174,11,0	0/1:4,2:7:18.19:39,0,18	1/1:6,7:12:14.25:108,14,0	0/0:13,0:13:27.32:0,27,171	0/0:10,1:10:2.01:0,2,157	0/0:22,0:22:45.25:0,45,399	0/0:6,1:8:6.05:0,6,84	0/1:4,9:15:1.74:136,0,2	1/1:11,16:25:32.74:241,33,0	1/1:5,4:8:5.71:33,6,0
chr10	85179859	.	TC	T	5682.61	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=0.236;DP=496;FS=5.008;HRun=7;HaplotypeScore=69.4395;InbreedingCoeff=0.9969;MQ=79.03;MQ0=0;MQRankSum=-1.999;QD=26.31;ReadPosRankSum=3.723;VQSLOD=5.6587;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1378	1/1:0,9:9:27.06:275,27,0	0/0:9,0:9:18.06:0,18,226	0/0:18,1:19:45.13:0,45,542	0/0:18,0:18:54.17:0,54,673	0/0:15,0:15:36.12:0,36,453	1/1:0,25:25:57.13:582,57,0	0/0:22,0:22:48.14:0,48,590	1/1:0,11:11:27.06:275,27,0	1/1:2,17:19:48.10:490,48,0	1/1:1,11:12:27.06:275,27,0	1/1:0,15:15:42.10:428,42,0	1/1:0,12:12:33.08:337,33,0	1/1:0,11:11:33.08:337,33,0	1/1:2,18:20:51.12:520,51,0	1/1:1,11:12:30.06:306,30,0	1/1:3,18:21:57.10:572,57,0	1/1:5,26:31:78.17:796,78,0	0/0:22,0:22:57.18:0,57,717	0/0:19,0:19:54.16:0,54,667	0/0:21,0:21:63.19:0,63,776	1/1:2,16:18:48.10:489,48,0	0/0:10,0:10:30.08:0,30,360	0/0:18,0:18:48.15:0,48,603	0/0:12,0:12:36.11:0,36,442	0/0:19,1:20:26.56:0,27,637	0/0:27,0:27:68.97:0,69,837	0/0:9,0:9:18.06:0,18,226
chr10	85180082	.	TG	T	1576.55	PASS	AB=0.916;AC=28;AF=0.500;AN=56;BaseQRankSum=4.480;DP=517;FS=9.159;HRun=11;HaplotypeScore=71.7345;InbreedingCoeff=0.3934;MQ=69.77;MQ0=1;MQRankSum=0.377;QD=4.93;ReadPosRankSum=5.121;VQSLOD=0.7794;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:25:17.95:0,18,161	1/1:2,5:7:11.73:98,12,0	0/0:13,0:12:5.28:0,5,74	0/1:15,0:16:32.98:33,0,81	0/0:8,2:10:2.99:0,3,24	0/1:15,1:16:15.69:16,0,41	1/1:11,14:25:49.97:400,50,0	0/1:19,1:20:12.62:13,0,74	0/0:11,0:17:2.84:0,3,14	1/1:16,5:21:11.94:95,12,0	1/1:13,4:17:8.96:73,9,0	1/1:8,0:23:28.49:82,28,0	1/1:3,0:12:15.74:45,16,0	1/1:7,0:20:32.77:94,33,0	1/1:16,8:27:32.11:221,32,0	0/0:17,0:17:14.86:0,15,114	1/1:8,18:30:53.07:393,53,0	0/0:24,0:25:18.03:0,18,184	0/1:15,3:18:74.17:74,0,88	0/0:20,0:20:5.96:0,6,44	0/1:17,3:20:9.61:10,0,104	1/1:6,0:18:20.36:59,20,0	0/0:13,0:13:3.01:0,3,32	0/1:24,4:28:37.17:37,0,221	0/0:18,0:18:6:0,6,56	0/0:17,0:17:3.01:0,3,32	0/0:19,2:20:18.02:0,18,176	1/1:1,1:2:3:25,3,0
chr10	85180092	.	GGT	G	399.38	PASS	AB=0.935;AC=6;AF=0.107;AN=56;BaseQRankSum=7.804;DP=413;FS=6.929;HRun=0;HaplotypeScore=65.1926;InbreedingCoeff=0.5503;MQ=76.55;MQ0=1;MQRankSum=-1.170;QD=6.44;ReadPosRankSum=6.693;VQSLOD=1.5645;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:62.81:0,63,683	0/0:8,0:8:16.45:0,16,92	0/0:15,0:13:28.81:0,29,312	0/0:22,0:22:34.58:0,35,448	0/0:12,0:12:23.92:0,24,217	0/0:10,0:10:20.96:0,21,246	0/0:23,1:24:42.90:0,43,398	0/0:17,0:17:35.95:0,36,379	0/0:14,0:14:27:0,27,280	0/0:11,0:11:14.76:0,15,108	0/0:8,0:8:23.66:0,24,160	0/1:17,1:18:12.32:100,0,12	0/1:11,1:12:22.91:83,0,23	1/1:14,4:18:22.66:262,23,0	0/0:14,0:14:2.90:0,3,129	0/0:6,0:6:18.06:0,18,287	0/0:27,0:27:24.99:0,25,310	0/0:17,0:17:33.11:0,33,532	0/0:14,0:14:35.01:0,35,408	0/0:16,0:16:29.93:0,30,299	0/0:18,0:18:41.88:0,42,463	1/1:14,0:14:23.84:89,24,0	0/0:8,0:8:11.87:0,12,147	0/0:20,0:20:46.60:0,47,620	0/0:9,0:9:14.98:0,15,194	0/0:12,0:12:30.03:0,30,335	0/0:19,0:19:53.97:0,54,665	0/0:3,0:3:5.89:0,6,37
chr10	85180956	.	TTCTCTCTCTCTC	T	1345.12	PASS	AB=0.889;AC=19;AF=0.365;AN=52;BaseQRankSum=5.396;DP=441;FS=4.487;HRun=0;HaplotypeScore=155.9990;InbreedingCoeff=0.6211;MQ=68.59;MQ0=12;MQRankSum=-5.396;QD=10.19;ReadPosRankSum=1.719;VQSLOD=2.5145;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:33.11:0,33,1512	0/0:8,0:8:3:0,3,25	0/0:24,0:17:2.50:0,2,9	0/0:31,0:24:3.38:0,3,26	0/0:12,0:12:15.05:0,15,791	0/0:22,0:21:26.76:0,27,964	0/0:12,1:18:3.94:0,4,12	./.	0/0:8,0:8:3.01:0,3,84	0/0:17,0:16:12.04:0,12,491	0/0:16,0:16:15.05:0,15,688	1/1:11,0:15:4.22:12,4,0	1/1:6,0:9:6.02:168,6,0	./.	0/0:24,0:24:30.08:0,30,1188	1/1:11,0:11:4.19:13,4,0	0/0:21,0:21:33.11:0,33,1501	0/0:16,0:15:12.04:0,12,407	0/1:14,2:16:1.45:98,0,1	1/1:5,4:10:1.84:28,2,0	1/1:9,1:11:5.46:114,5,0	1/1:7,0:14:1.45:5,1,0	0/0:16,0:16:6.01:0,6,181	0/0:17,0:16:33.52:0,34,1266	0/0:12,0:12:21.07:0,21,963	1/1:16,3:19:6.02:207,6,0	1/1:12,4:16:8.64:245,9,0	1/1:5,4:9:21.07:618,21,0
chr10	85181002	.	CCACACA	C	151.22	PASS	AB=0.898;AC=13;AF=0.260;AN=50;BaseQRankSum=3.374;DP=384;FS=6.229;HRun=0;HaplotypeScore=103.1024;InbreedingCoeff=0.4686;MQ=37.05;MQ0=56;MQRankSum=-1.803;QD=1.58;ReadPosRankSum=-1.193;VQSLOD=1.3693;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:24:12.51:0,13,308	0/1:7,2:7:4.55:107,0,5	./.	./.	0/0:10,0:9:9.03:0,9,196	0/0:20,0:17:8.11:0,8,228	0/1:26,0:19:0:0,0,0	./.	1/1:8,0:7:5.87:38,6,0	0/0:13,0:8:0:0,0,0	0/1:6,1:6:0:0,0,0	0/0:10,0:9:6.02:0,6,133	1/1:9,0:10:0.68:2,1,0	0/0:9,0:8:6.02:0,6,192	1/1:11,3:14:5.67:40,6,0	1/1:10,0:8:2.24:44,2,0	0/0:20,4:22:0.47:0,0,1	1/1:11,0:8:2.32:41,2,0	0/0:16,0:14:21.03:0,21,490	0/0:14,0:12:3.01:0,3,78	0/0:14,0:10:5.97:0,6,157	0/0:21,0:20:6.02:0,6,134	0/0:11,0:8:3.01:0,3,96	0/0:24,0:22:15.52:0,16,342	0/0:16,0:15:18.06:0,18,504	0/0:18,0:13:18.06:0,18,434	0/0:11,0:10:9.02:0,9,160	0/0:12,0:10:9.03:0,9,255
chr10	85181963	.	C	CT	10912.83	PASS	AB=0.986;AC=33;AF=0.589;AN=56;BaseQRankSum=-6.983;DP=727;FS=1.827;HRun=3;HaplotypeScore=98.2162;InbreedingCoeff=0.6968;MQ=89.25;MQ0=0;MQRankSum=-2.231;QD=23.72;ReadPosRankSum=-1.004;VQSLOD=4.0461;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,174,2027	0/1:12,0:12:2.07:44,0,2	0/0:31,0:29:35.07:0,35,457	0/0:27,0:27:29.94:0,30,313	0/0:37,0:37:99:0,108,1254	0/0:17,0:17:51.15:0,51,601	0/1:20,0:20:9.72:15,0,10	1/1:4,26:30:78.10:976,78,0	1/1:2,31:33:78.26:1089,78,0	1/1:37,0:37:18.27:176,18,0	0/1:14,0:14:6.95:7,0,13	1/1:0,22:22:63.21:836,63,0	1/1:2,24:26:60.20:796,60,0	1/1:3,13:16:27.03:464,27,0	0/0:26,0:26:10.28:0,10,26	0/1:23,1:24:4.43:53,0,4	0/1:34,1:35:11.33:148,0,11	1/1:5,12:17:43.51:569,44,0	1/1:2,25:27:75.12:924,75,0	1/1:1,24:25:63.14:837,63,0	1/1:3,21:24:51.17:712,51,0	1/1:3,21:24:63.63:816,64,0	0/0:28,0:28:81.20:0,81,927	0/0:22,0:22:63.18:0,63,742	0/0:19,0:19:51.12:0,51,577	1/1:3,29:32:82.04:1091,82,0	1/1:3,25:27:59.99:815,60,0	1/1:1,13:14:39.13:545,39,0
chr10	85184497	.	GGTGTGCAT	G	7453.98	PASS	AB=0.566;AC=13;AF=0.232;AN=56;BaseQRankSum=13.942;DP=1082;FS=3.322;HRun=0;HaplotypeScore=303.8639;InbreedingCoeff=0.8739;MQ=61.10;MQ0=2;MQRankSum=-9.482;QD=30.30;ReadPosRankSum=-4.294;VQSLOD=3.4914;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:99:0,110,4421	0/0:20,0:20:54.19:0,54,2314	0/0:46,0:39:56.79:0,57,2297	0/0:48,0:41:68.89:0,69,2072	0/0:20,0:20:51.17:0,51,1968	0/0:23,0:23:65.03:0,65,2467	0/0:38,0:38:99:0,102,3966	1/1:12,39:51:99:2598,114,0	0/0:47,0:47:99:0,126,5177	0/0:64,0:64:99:0,151,6047	0/0:27,0:27:66.23:0,66,2683	0/0:61,0:61:99:0,172,6597	0/0:39,0:39:99:0,108,4231	0/0:49,0:49:99:0,123,5070	0/0:54,0:54:99:0,147,5879	0/0:42,0:42:99:0,111,4290	0/0:17,0:17:41.87:0,42,1632	0/0:33,0:33:85.53:0,86,3217	1/1:9,11:20:30.97:672,31,0	1/1:2,30:31:5.49:40,5,0	1/1:39,21:59:14.84:143,15,0	0/0:37,0:37:93.32:0,93,3604	0/0:28,0:28:72.23:0,72,2703	0/0:59,0:59:99:0,144,5904	0/0:34,0:34:93.30:0,93,3715	0/1:11,36:47:17.25:2616,0,17	1/1:4,20:24:36.93:904,37,0	1/1:4,8:12:20.99:480,21,0
chr10	85187525	.	ACT	A	272.77	PASS	AB=0.962;AC=20;AF=0.714;AN=28;BaseQRankSum=4.167;DP=513;FS=8.713;HRun=0;HaplotypeScore=134.0599;InbreedingCoeff=0.3468;MQ=58.72;MQ0=10;MQRankSum=-2.681;QD=1.30;ReadPosRankSum=2.697;VQSLOD=2.0682;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,15:40:8.59:58,9,0	1/1:8,0:8:5.41:24,5,0	./.	./.	1/1:8,0:9:2.84:14,3,0	0/0:22,0:24:22.25:0,22,237	./.	./.	./.	./.	./.	1/1:18,0:18:0.44:1,0,0	1/1:20,0:19:5.95:23,6,0	./.	./.	0/1:25,0:26:58.41:58,0,115	1/1:8,0:7:2.37:8,2,0	./.	1/1:21,0:20:2.84:14,3,0	./.	./.	./.	0/0:13,0:13:3.01:0,3,41	0/0:24,0:31:42.47:0,42,389	0/1:11,1:12:22.17:23,0,22	1/1:26,0:27:14.45:81,14,0	1/1:21,0:20:11.68:82,12,0	./.
chr10	85187549	.	TCTCTCTC	T	490.43	PASS	AB=0.940;AC=11;AF=0.196;AN=56;BaseQRankSum=8.431;DP=505;FS=29.129;HRun=0;HaplotypeScore=192.7876;InbreedingCoeff=0.1117;MQ=43.85;MQ0=21;MQRankSum=-5.822;QD=3.66;ReadPosRankSum=4.248;VQSLOD=1.3335;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:39.07:0,39,630	0/1:8,2:10:18.85:166,0,19	0/0:9,0:4:8.62:0,9,87	0/0:21,0:11:33.10:0,33,412	0/0:11,0:11:21.05:0,21,324	0/0:25,0:25:51.17:0,51,1449	0/0:16,0:15:9.03:0,9,115	0/0:26,0:22:60.19:0,60,757	0/0:20,0:19:10.95:0,11,160	0/0:17,0:16:44.35:0,44,402	0/1:10,1:11:0.17:70,0,0	0/1:13,0:13:15.73:16,0,101	0/1:19,0:18:72.98:73,0,217	0/0:9,0:9:2.15:0,2,37	1/1:11,2:17:6.02:82,6,0	0/0:24,0:23:4.61:0,5,1047	0/1:8,2:8:35.05:74,0,35	0/0:8,0:8:21.07:0,21,329	0/0:17,0:17:5.23:0,5,377	0/0:28,0:28:9:0,9,88	0/0:22,0:21:6.02:0,6,77	1/1:13,0:13:2.89:7,3,0	0/0:10,0:10:12.04:0,12,296	0/0:39,0:39:93.10:0,93,2430	0/0:20,0:20:31.75:0,32,617	0/1:23,0:23:90:90,0,443	0/1:17,0:16:52.93:53,0,147	0/0:11,0:9:24.08:0,24,305
chr10	85187556	.	CTCTCTCTCTCTCTCTCTCTGTGTG	C	5046.17	PASS	AB=0.879;AC=29;AF=0.537;AN=54;BaseQRankSum=9.220;DP=463;FS=14.259;HRun=0;HaplotypeScore=281.0624;InbreedingCoeff=0.5404;MQ=40.78;MQ0=23;MQRankSum=-9.209;QD=18.76;ReadPosRankSum=-2.892;VQSLOD=1.9464;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:42.59:0,43,2423	1/1:7,0:7:8:194,8,0	./.	0/0:14,0:5:9.03:0,9,229	0/0:10,0:10:21.07:0,21,1475	0/0:26,0:26:54.16:0,54,3972	1/1:14,0:11:3.46:25,3,0	1/1:26,0:22:30.63:742,31,0	0/1:20,0:19:3.14:3,0,234	0/1:17,0:15:99:169,0,203	0/1:11,0:11:0:0,0,0	1/1:9,0:9:7.42:122,7,0	1/1:16,0:14:22.44:436,22,0	1/1:6,0:6:1.67:4,2,0	0/1:16,0:15:0.07:0,0,0	0/0:24,0:23:24.12:0,24,2299	0/1:9,0:7:10.31:49,0,10	0/0:9,0:8:17.96:0,18,502	1/1:2,13:14:39.02:820,39,0	0/1:5,20:25:0:0,0,0	1/1:21,0:20:0.47:2,0,0	1/1:13,0:12:7.51:22,8,0	0/0:10,0:10:21:0,21,1126	0/0:40,0:40:92.13:0,92,6796	0/0:16,0:16:33.11:0,33,1737	0/1:7,14:21:8.66:1490,0,9	1/1:4,10:13:15.05:796,15,0	1/1:9,0:7:9.03:171,9,0
chr10	85187574	.	CTGTGTG	C	3029.03	PASS	AB=0.943;AC=26;AF=0.481;AN=54;BaseQRankSum=8.618;DP=482;FS=4.787;HRun=0;HaplotypeScore=202.9841;InbreedingCoeff=0.2800;MQ=40.88;MQ0=18;MQRankSum=-8.772;QD=13.40;ReadPosRankSum=-1.763;VQSLOD=2.7540;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:51.11:0,51,1129	0/1:7,0:7:20.79:21,0,52	0/0:19,0:4:12.04:0,12,271	0/0:13,0:8:24.08:0,24,650	0/0:13,0:12:30.10:0,30,767	0/0:28,0:28:44.41:0,44,1382	1/1:14,0:11:5.34:23,5,0	1/1:5,20:21:39.65:885,40,0	1/1:15,0:14:8.69:37,9,0	0/1:17,0:16:99:185,0,190	0/1:12,0:12:10.16:81,0,10	1/1:9,0:9:1.63:4,2,0	0/1:15,0:13:26.74:60,0,27	1/1:7,0:7:0.10:0,0,0	1/1:16,0:16:5.31:65,5,0	0/0:23,0:22:23.89:0,24,253	0/1:8,0:7:23.83:25,0,24	0/1:6,0:5:6.07:6,0,11	1/1:14,0:13:36.01:630,36,0	./.	0/0:4,14:17:0.28:0,0,1	1/1:17,0:15:3.36:9,3,0	0/0:10,0:10:24.08:0,24,648	0/0:51,0:51:93.28:0,93,2405	0/0:14,0:14:24.70:0,25,515	0/1:18,3:21:21.17:797,0,21	1/1:11,4:15:15:220,15,0	0/1:4,4:7:81.69:156,0,82
chr10	85187582	.	GTA	G	549.46	PASS	AB=0.913;AC=25;AF=0.446;AN=56;BaseQRankSum=7.544;DP=510;FS=3.435;HRun=0;HaplotypeScore=208.8543;InbreedingCoeff=0.2708;MQ=43.50;MQ0=16;MQRankSum=-6.411;QD=1.98;ReadPosRankSum=-1.366;VQSLOD=2.6646;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:5.26:0,5,563	0/1:5,2:7:5.98:6,0,27	0/0:27,0:9:23.09:0,23,240	0/0:16,0:11:27.04:0,27,414	0/0:15,0:14:35.36:0,35,458	0/0:29,1:30:2.48:0,2,702	0/1:9,5:11:0.11:0,0,0	0/1:28,0:25:80.20:137,0,80	1/1:8,8:15:8.79:93,9,0	1/1:5,12:16:32.29:181,32,0	0/1:4,7:11:2.77:3,0,17	1/1:5,4:9:2.03:7,2,0	1/1:9,6:13:13.59:71,14,0	0/1:7,0:7:0.02:0,0,0	1/1:10,6:16:0.87:4,1,0	0/1:21,1:22:22.84:117,0,23	1/1:4,4:7:5.60:14,6,0	1/1:6,0:5:1.68:6,2,0	0/1:18,0:17:17.93:18,0,62	0/1:28,0:28:0.04:0,0,0	0/1:16,0:16:0:0,0,0	0/1:17,0:15:0.20:0,0,0	0/0:10,0:10:24.08:0,24,368	0/0:50,0:50:57.19:0,57,1316	0/0:12,0:12:0.35:0,0,313	0/1:21,1:22:12.02:39,0,12	0/0:19,0:19:6.69:0,7,30	0/0:9,0:8:5.85:0,6,57
chr10	85187594	.	GTC	G	257.60	PASS	AB=0.982;AC=20;AF=0.370;AN=54;BaseQRankSum=8.075;DP=541;FS=7.457;HRun=0;HaplotypeScore=223.7012;InbreedingCoeff=0.4468;MQ=46.06;MQ0=12;MQRankSum=-5.413;QD=1.33;ReadPosRankSum=1.074;VQSLOD=1.6632;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:59.55:0,60,918	0/1:7,0:7:9.58:10,0,15	0/0:37,0:15:7.29:0,7,432	0/0:25,0:16:31.36:0,31,548	0/0:19,0:18:51.04:0,51,807	0/0:29,1:30:30.32:0,30,1070	1/1:11,5:13:1.37:14,1,0	0/0:32,0:30:42.06:0,42,661	1/1:17,2:17:9.67:94,10,0	0/1:16,1:16:9.84:117,0,10	0/1:9,1:10:12.34:16,0,12	1/1:9,0:9:0.47:2,0,0	1/1:14,0:13:11.37:58,11,0	0/1:9,0:9:0.02:0,0,0	1/1:15,0:15:4.53:24,5,0	0/1:20,0:20:16.60:17,0,69	1/1:7,0:7:10.92:56,11,0	0/1:6,0:5:2.94:6,0,3	0/0:22,0:22:59.93:0,60,612	0/1:26,0:26:0:0,0,0	./.	0/1:18,0:16:0.20:0,0,0	0/0:14,0:14:33.07:0,33,533	0/0:51,0:51:83.83:0,84,1850	0/0:11,0:11:27.06:0,27,511	0/0:24,0:24:43.26:0,43,492	0/0:21,0:21:16.73:0,17,140	0/0:8,0:8:20.95:0,21,237
chr10	85187595	.	TCTGTGTGG	T	1705.87	PASS	AB=0.931;AC=30;AF=0.536;AN=56;BaseQRankSum=11.664;DP=534;FS=0.493;HRun=0;HaplotypeScore=254.4628;InbreedingCoeff=0.4766;MQ=46.35;MQ0=11;MQRankSum=-9.438;QD=6.69;ReadPosRankSum=1.301;VQSLOD=2.3039;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:62.89:0,63,2294	1/1:4,2:6:4.88:57,5,0	0/0:40,0:18:5.07:0,5,1305	0/0:25,0:16:45.15:0,45,1441	0/0:20,0:19:13.78:0,14,1695	0/0:31,0:31:27.26:0,27,2567	1/1:15,0:12:9.02:64,9,0	0/0:27,0:25:22.11:0,22,426	1/1:18,0:16:10.81:126,11,0	0/1:7,10:16:42.75:612,0,43	1/1:5,5:10:10.59:145,11,0	1/1:5,4:9:4.41:41,4,0	1/1:7,6:12:15.48:217,15,0	1/1:3,6:9:0.72:3,1,0	1/1:8,6:14:8.80:102,9,0	0/0:19,0:19:17.48:0,17,200	1/1:3,3:6:14.57:151,15,0	1/1:5,2:6:14.98:174,15,0	0/1:22,0:22:4.89:5,0,317	0/1:26,0:26:0:0,0,0	1/1:12,0:12:1.31:3,1,0	1/1:8,10:16:4.09:13,4,0	0/0:14,0:14:33.11:0,33,1277	0/0:51,0:51:99:0,111,4423	0/0:12,0:12:31.92:0,32,1220	0/1:22,1:23:90.69:125,0,91	0/1:21,0:21:38.51:39,0,54	0/1:9,0:9:15.19:15,0,205
chr10	85187602	.	GGGTATGTCTCTC	G	2371	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=12.131;DP=509;FS=0.983;HRun=0;HaplotypeScore=264.9390;InbreedingCoeff=0.5830;MQ=47.43;MQ0=3;MQRankSum=-10.640;QD=13.10;ReadPosRankSum=-1.006;VQSLOD=1.8969;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:65.44:0,65,3246	1/1:3,0:3:4.22:33,4,0	0/0:47,0:21:27.81:0,28,2180	0/0:26,0:17:48.14:0,48,1801	0/0:24,0:23:63.21:0,63,3082	0/0:33,0:33:75.56:0,76,3607	1/1:6,6:10:9.13:130,9,0	0/0:21,0:21:38.18:0,38,1490	1/1:12,4:14:12.42:233,12,0	1/1:13,0:12:33.11:877,33,0	1/1:9,0:9:13.04:78,13,0	1/1:5,0:5:6.07:64,6,0	1/1:8,0:7:14.17:280,14,0	1/1:9,0:9:0.71:3,1,0	1/1:7,0:7:14.33:190,14,0	0/0:16,0:16:2.23:0,2,174	1/1:6,0:6:14.66:209,15,0	1/1:7,0:6:14.99:238,15,0	0/0:21,0:21:0.86:0,1,900	0/0:27,0:27:1.38:0,1,95	1/1:13,0:13:3.59:10,4,0	1/1:14,1:13:7.46:21,7,0	0/0:13,0:13:33.11:0,33,1700	0/0:50,0:50:88.08:0,88,5790	0/0:14,0:14:37.94:0,38,1943	0/1:25,0:25:99:136,0,601	0/1:21,0:21:16.46:34,0,16	0/1:11,0:11:30.89:31,0,404
chr10	85187606	.	ATGTCTCTC	A	1913.79	PASS	AB=0.963;AC=27;AF=0.482;AN=56;BaseQRankSum=9.362;DP=505;FS=1.925;HRun=0;HaplotypeScore=239.8408;InbreedingCoeff=0.7675;MQ=47.38;MQ0=3;MQRankSum=-8.409;QD=13.29;ReadPosRankSum=2.787;VQSLOD=2.7994;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:63.20:0,63,2411	1/1:0,3:3:4.60:67,5,0	0/0:45,0:22:31.15:0,31,1728	0/0:27,0:17:42.01:0,42,1123	0/0:24,0:23:69.24:0,69,2716	0/0:29,0:29:74.26:0,74,2709	1/1:12,0:9:9.13:79,9,0	0/0:24,0:24:63.02:0,63,1813	1/1:6,10:14:12.54:242,13,0	1/1:1,11:11:33.11:751,33,0	1/1:2,7:9:11.96:151,12,0	1/1:1,4:5:4.73:41,5,0	1/1:2,6:7:13.26:206,13,0	1/1:3,6:9:0.59:3,1,0	1/1:0,6:6:14.34:252,14,0	0/0:15,1:16:17.90:0,18,121	1/1:1,4:5:11.61:182,12,0	1/1:5,2:6:11.77:114,12,0	0/0:23,0:23:66.12:0,66,1445	0/0:27,0:27:3.01:0,3,113	1/1:13,0:13:1.31:3,1,0	1/1:2,11:11:4.09:13,4,0	0/0:13,0:13:33.11:0,33,1174	0/0:50,0:50:99:0,117,4525	0/0:15,0:15:39.03:0,39,1544	0/1:25,1:26:11.15:11,0,899	0/0:23,0:23:18.05:0,18,143	0/0:11,0:11:31.72:0,32,524
chr10	85187608	.	GTCTCTC	G	1246.20	PASS	AB=0.959;AC=18;AF=0.321;AN=56;BaseQRankSum=9.537;DP=516;FS=3.514;HRun=0;HaplotypeScore=235.1775;InbreedingCoeff=0.4847;MQ=47.10;MQ0=6;MQRankSum=-8.071;QD=11.03;ReadPosRankSum=2.405;VQSLOD=2.6089;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:63.15:0,63,2148	0/1:3,0:3:15.78:16,0,25	0/0:46,0:22:22.10:0,22,1707	0/0:29,0:16:45.15:0,45,1265	0/0:24,0:23:69.24:0,69,2454	0/0:30,0:30:74.10:0,74,2363	1/1:9,2:8:8.46:126,8,0	0/0:27,0:27:74.44:0,74,2139	1/1:15,0:14:12.54:157,13,0	1/1:12,0:11:33.10:437,33,0	0/1:9,0:9:16.10:62,0,16	0/1:7,0:7:32.54:33,0,33	1/1:8,0:7:11.76:113,12,0	0/0:7,3:10:2.68:0,3,16	1/1:6,0:6:14.32:205,14,0	0/0:16,0:16:5.54:0,6,193	1/1:5,0:5:11.48:105,11,0	0/1:7,2:8:57.11:168,0,57	0/0:24,0:23:66.64:0,67,1712	0/0:24,0:24:2.68:0,3,109	0/1:13,0:13:0:0,0,0	0/1:13,1:12:3.21:3,0,9	0/0:14,0:14:36.12:0,36,1227	0/0:50,0:50:99:0,120,4151	0/0:16,0:16:42.04:0,42,1512	0/0:25,0:25:5.82:0,6,1092	0/0:23,0:23:18.12:0,18,255	0/0:11,0:11:20.44:0,20,573
chr10	85187625	.	CGT	C	747.28	PASS	AB=0.936;AC=21;AF=0.404;AN=52;BaseQRankSum=5.912;DP=513;FS=8.797;HRun=0;HaplotypeScore=210.3749;InbreedingCoeff=0.3839;MQ=44.36;MQ0=12;MQRankSum=-3.455;QD=2.93;ReadPosRankSum=3.664;VQSLOD=1.1485;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,19:33:29.50:336,30,0	0/0:3,0:3:3.01:0,3,35	./.	0/0:24,0:10:6.02:0,6,89	0/1:22,1:23:5.76:6,0,498	0/1:25,2:28:50.40:50,0,448	1/1:14,0:12:1.41:2,1,0	0/0:19,0:18:2.74:0,3,12	1/1:16,0:14:0.43:4,0,0	0/1:25,0:24:0.64:1,0,176	0/0:14,0:15:2.98:0,3,34	0/0:10,0:10:7.74:0,8,35	0/1:10,0:9:10.68:18,0,11	0/0:11,0:11:3.21:0,3,13	0/0:15,0:15:10.24:0,10,43	1/1:6,0:18:19.36:96,19,0	0/0:9,0:9:7.95:0,8,36	0/0:10,0:9:17:0,17,123	1/1:16,0:14:19.54:93,20,0	0/0:18,0:18:2.61:0,3,18	./.	0/0:21,0:19:2.55:0,3,12	0/0:11,1:12:9.03:0,9,137	0/0:48,3:51:14.17:0,14,1053	0/1:15,2:18:31.96:32,0,291	1/1:24,0:23:13.72:126,14,0	1/1:16,0:17:15.22:66,15,0	1/1:11,0:10:16.96:82,17,0
chr10	85187641	.	TGTGTGTGTGTG	T	4383.83	PASS	AB=0.872;AC=21;AF=0.375;AN=56;BaseQRankSum=10.292;DP=587;FS=0.385;HRun=0;HaplotypeScore=281.2996;InbreedingCoeff=-0.2726;MQ=43.08;MQ0=15;MQRankSum=-7.697;QD=12.56;ReadPosRankSum=-1.099;VQSLOD=2.4877;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:57.20:0,57,1957	0/0:3,1:4:3.80:0,4,68	0/0:31,0:16:45.15:0,45,840	0/0:28,0:11:33.11:0,33,896	0/0:26,0:25:72.23:0,72,3005	0/0:30,0:30:72.72:0,73,3363	0/1:20,0:18:32.44:32,0,40	0/1:24,0:23:11.07:11,0,210	0/1:18,4:20:53.96:120,0,54	0/1:23,3:26:99:221,0,260	0/1:16,2:18:92.41:93,0,92	0/1:15,1:17:14.38:86,0,14	0/1:15,3:17:49.23:222,0,49	0/1:8,1:10:12.24:12,0,40	0/1:13,3:16:50.78:92,0,51	1/1:19,0:19:17.60:487,18,0	0/1:10,0:10:21.52:22,0,107	0/1:10,1:11:99:106,0,204	0/1:11,7:16:58.24:573,0,58	0/1:19,4:23:21.35:145,0,21	0/1:9,1:10:4.46:4,0,7	0/1:26,4:28:15.66:154,0,16	0/0:16,0:16:42.13:0,42,1347	0/0:51,0:51:99:0,127,5347	0/0:18,0:17:48.15:0,48,1735	0/1:12,13:24:25.08:987,0,25	1/1:8,11:19:36.41:548,36,0	0/1:7,6:12:73.61:469,0,74
chr10	85187724	.	C	CA	4394.52	PASS	AB=0.929;AC=13;AF=0.232;AN=56;BaseQRankSum=8.990;DP=691;FS=7.095;HRun=1;HaplotypeScore=99.3158;InbreedingCoeff=0.9466;MQ=73.88;MQ0=0;MQRankSum=-0.992;QD=27.81;ReadPosRankSum=1.425;VQSLOD=4.2938;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.25:0,81,1105	1/1:0,7:7:20.09:221,20,0	0/0:15,0:15:40.36:0,40,521	0/0:19,0:19:47.49:0,47,573	0/0:31,0:31:93.30:0,93,1275	0/0:25,0:25:67.11:0,67,920	1/1:1,25:26:63.20:769,63,0	0/0:26,0:26:72.06:0,72,898	0/0:27,0:27:78.26:0,78,1085	1/1:3,28:31:92.06:1133,92,0	1/1:3,26:29:78.34:949,78,0	0/0:24,0:24:69.23:0,69,955	0/0:27,0:27:78.21:0,78,1037	0/0:19,0:19:57.19:0,57,790	1/1:0,26:26:72.22:881,72,0	0/0:28,0:28:35.76:0,36,283	1/1:0,13:13:36.11:441,36,0	0/0:21,0:21:50.26:0,50,236	0/0:19,0:19:54.17:0,54,728	0/0:41,0:41:99:0,120,1649	0/0:20,0:20:57.18:0,57,778	0/0:32,0:32:96.31:0,96,1306	0/0:33,0:33:96.30:0,96,1304	0/0:39,0:39:99:0,114,1578	0/0:24,0:24:72.24:0,72,1004	0/1:24,2:26:0.11:0,0,858	0/0:25,0:25:72.20:0,72,938	0/0:10,0:10:27.09:0,27,373
chr10	85187967	.	GA	G	2152.06	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.410;DP=719;FS=0.452;HRun=5;HaplotypeScore=83.0879;InbreedingCoeff=0.9793;MQ=88.71;MQ0=1;MQRankSum=-1.562;QD=27.59;ReadPosRankSum=2.867;VQSLOD=3.8223;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,163,2181	0/0:10,0:10:27.09:0,27,369	0/0:32,0:32:81.23:0,81,1066	0/0:26,0:26:75.23:0,75,996	0/0:26,0:26:69.22:0,69,926	0/0:18,0:18:51.16:0,51,681	0/0:38,0:38:7.82:0,8,467	0/0:35,0:35:96.30:0,96,1273	0/0:23,0:23:54.43:0,54,331	0/0:28,0:28:78.26:0,78,1065	0/0:18,0:18:45.15:0,45,614	1/1:1,19:20:51.15:578,51,0	1/1:0,20:20:51.15:578,51,0	1/1:1,13:14:39.11:442,39,0	0/0:24,0:24:72.17:0,72,945	0/0:28,0:28:51.85:0,52,425	0/0:36,0:36:99:0,99,1337	0/0:18,0:18:49.67:0,50,297	0/0:21,0:21:54.16:0,54,708	0/0:23,0:23:51.17:0,51,696	0/0:26,0:25:69.23:0,69,943	1/1:1,23:24:63.18:713,63,0	0/0:16,0:16:42.14:0,42,574	0/0:52,0:52:99:0,150,2032	0/0:21,0:21:60.20:0,60,820	0/0:19,0:19:51.17:0,51,697	0/0:29,0:29:81.27:0,81,1108	0/0:17,0:17:48.16:0,48,656
chr10	85188978	.	A	AGG	1407.41	PASS	AB=0.737;AC=14;AF=0.250;AN=56;BaseQRankSum=2.808;DP=433;FS=1.857;HRun=3;HaplotypeScore=73.9669;InbreedingCoeff=0.7951;MQ=67.42;MQ0=5;MQRankSum=-1.760;QD=12.91;ReadPosRankSum=-1.226;VQSLOD=0.2440;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:22.26:0,22,270	0/0:7,0:7:11.99:0,12,100	0/0:25,0:15:30.57:0,31,290	0/0:36,0:19:49.70:0,50,416	0/0:19,0:19:20.95:0,21,169	0/0:12,0:12:26.94:0,27,224	1/1:27,0:27:69.47:562,69,0	0/0:20,0:20:56.88:0,57,499	0/1:2,10:12:30.05:48,0,30	0/0:22,0:22:59.95:0,60,547	0/0:16,0:16:32.96:0,33,274	1/1:13,0:13:31.75:264,32,0	1/1:10,0:10:23.62:182,24,0	1/1:7,0:7:18.01:162,18,0	0/0:9,0:9:26.93:0,27,219	1/1:16,0:14:24.28:177,24,0	0/0:24,0:24:45.92:0,46,435	0/0:16,0:15:29.41:0,29,266	0/0:12,0:12:29.90:0,30,245	0/0:15,0:15:38.93:0,39,319	0/0:5,0:5:14.68:0,15,105	1/1:10,0:10:20.97:180,21,0	0/0:13,0:13:17.90:0,18,138	0/0:10,0:9:26.96:0,27,220	0/0:10,0:10:26.80:0,27,213	0/0:12,0:12:30.91:0,31,278	0/0:21,0:21:50.51:0,51,391	0/1:12,1:13:23.12:23,0,220
chr10	85188980	.	GGAGAGA	G	199.44	PASS	AB=1.000;AC=11;AF=0.275;AN=40;BaseQRankSum=1.689;DP=442;FS=12.272;HRun=0;HaplotypeScore=98.7473;InbreedingCoeff=0.5001;MQ=66.59;MQ0=7;MQRankSum=-2.215;QD=1.97;ReadPosRankSum=-1.329;VQSLOD=1.1080;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:6.02:0,6,141	1/1:4,0:6:3.01:42,3,0	./.	./.	./.	0/0:12,0:12:3.01:0,3,91	1/1:26,0:26:10.53:103,11,0	0/0:21,0:21:2.04:0,2,6	0/0:12,0:12:6.02:0,6,175	./.	1/1:14,0:14:3:52,3,0	0/0:12,0:12:8.99:0,9,87	./.	0/0:9,0:8:14.93:0,15,192	0/1:10,0:10:0:0,0,0	0/0:17,0:14:6.01:0,6,72	1/1:23,0:23:3.10:63,3,0	0/0:18,0:16:15.02:0,15,346	./.	./.	0/0:5,0:5:6.01:0,6,120	0/0:12,0:12:8.99:0,9,91	./.	0/0:12,0:11:3.01:0,3,55	0/0:10,0:10:15.05:0,15,377	0/0:12,0:12:6.02:0,6,180	1/1:17,5:22:2.88:60,3,0	0/0:12,0:13:6.02:0,6,137
chr10	85189681	.	T	TTTTA	605.10	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=-1.094;DP=263;FS=14.404;HRun=0;HaplotypeScore=42.6203;InbreedingCoeff=0.5758;MQ=65.42;MQ0=8;MQRankSum=-2.300;QD=24.20;ReadPosRankSum=-0.151;VQSLOD=1.6851;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:21.07:0,21,342	0/0:3,0:3:6.02:0,6,98	1/1:6,0:5:3.01:33,3,0	0/0:9,0:7:3.01:0,3,49	0/0:11,0:11:15.05:0,15,244	0/0:13,0:12:27.09:0,27,417	0/0:7,0:7:9.03:0,9,143	0/0:24,0:23:27.01:0,27,381	1/1:3,0:3:6.02:104,6,0	0/0:12,0:12:24.08:0,24,371	0/0:12,0:11:21.07:0,21,332	0/0:8,0:8:14.98:0,15,187	0/0:5,0:5:6.02:0,6,97	0/0:3,0:3:3:0,3,25	0/0:8,0:8:12.04:0,12,195	1/1:2,0:3:2.94:18,3,0	0/0:25,0:25:54.17:0,54,856	1/1:3,10:11:24.08:580,24,0	0/0:15,0:14:18.03:0,18,265	0/0:5,0:5:3.01:0,3,47	0/0:1,0:1:3.01:0,3,49	./.	0/0:4,0:4:6.02:0,6,98	0/0:5,0:5:6.02:0,6,98	0/0:10,0:10:21.06:0,21,319	0/0:18,0:18:33.11:0,33,525	0/0:6,0:6:12.03:0,12,173	0/0:17,0:15:24.08:0,24,391
chr10	85189811	.	AC	A	780.90	PASS	AB=0.908;AC=18;AF=0.321;AN=56;BaseQRankSum=2.598;DP=314;FS=2.412;HRun=10;HaplotypeScore=44.5972;InbreedingCoeff=0.7054;MQ=77.50;MQ0=10;MQRankSum=-1.997;QD=7.97;ReadPosRankSum=2.801;VQSLOD=1.2455;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,9:13:20.99:181,21,0	1/1:2,2:4:5.99:52,6,0	0/0:38,0:18:32.25:0,32,282	0/0:35,0:25:50.82:0,51,429	0/0:6,0:6:8.99:0,9,90	0/0:7,0:7:15.04:0,15,165	0/0:23,1:24:34.07:0,34,573	0/0:10,0:10:15.03:0,15,158	0/0:6,0:6:11.97:0,12,101	1/1:1,8:8:20.99:182,21,0	1/1:2,4:6:6:52,6,0	0/0:4,0:4:9.01:0,9,91	0/0:5,0:5:6.02:0,6,65	0/0:3,0:3:6:0,6,58	1/1:1,3:4:6:52,6,0	1/1:4,0:4:8.83:60,9,0	1/1:7,13:18:34.30:309,34,0	1/1:14,0:16:16.58:69,17,0	0/0:11,0:11:21.02:0,21,217	0/0:7,0:7:9.02:0,9,98	0/0:11,0:10:14.79:0,15,155	0/0:8,0:8:12.03:0,12,130	0/0:7,0:7:12.01:0,12,120	0/0:11,0:11:18.04:0,18,191	0/1:10,1:11:8.12:8,0,79	0/0:10,0:10:13.85:0,14,136	0/1:8,1:9:5.02:5,0,157	0/0:12,1:13:7.40:0,7,142
chr10	85189817	.	CCCCCTCT	C	439.57	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.745;DP=323;FS=13.870;HRun=0;HaplotypeScore=73.3929;InbreedingCoeff=0.6042;MQ=74.01;MQ0=28;MQRankSum=-3.572;QD=23.14;ReadPosRankSum=-0.034;VQSLOD=1.7652;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:24.05:0,24,526	0/0:4,0:4:9.02:0,9,170	0/0:33,0:16:38.12:0,38,682	0/0:34,0:25:55.69:0,56,1353	0/0:7,0:6:9.01:0,9,216	0/0:10,0:9:24.06:0,24,617	0/0:25,0:24:61.98:0,62,1777	0/0:11,0:9:21.02:0,21,501	0/0:5,0:5:15.01:0,15,264	0/0:10,0:9:24.05:0,24,541	0/0:6,0:5:6.02:0,6,141	0/0:5,0:5:14.50:0,15,237	0/0:6,0:6:12.50:0,12,222	0/0:4,0:3:9.02:0,9,178	0/0:5,0:3:6.02:0,6,146	0/0:5,0:5:9.49:0,9,184	0/0:20,0:16:41.63:0,42,869	1/1:8,11:16:24.08:533,24,0	0/0:13,0:11:24.08:0,24,643	0/0:7,0:5:9.03:0,9,219	0/0:14,0:12:23.82:0,24,453	0/0:6,0:6:15.04:0,15,405	0/0:8,0:7:15.03:0,15,270	0/0:10,0:9:21.94:0,22,620	0/0:10,0:10:24.93:0,25,401	0/0:11,0:11:30.07:0,30,505	0/0:8,0:8:24.07:0,24,554	0/0:12,0:11:18.05:0,18,398
chr10	85189820	.	C	CT	140.98	PASS	AB=0.947;AC=12;AF=0.214;AN=56;BaseQRankSum=2.471;DP=314;FS=0.912;HRun=0;HaplotypeScore=54.0994;InbreedingCoeff=0.3262;MQ=72.77;MQ0=30;MQRankSum=-0.754;QD=1.72;ReadPosRankSum=3.937;VQSLOD=1.2782;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,2:13:21.15:58,0,21	1/1:3,0:3:2.68:8,3,0	0/0:29,0:14:32.28:0,32,304	0/0:31,0:23:51.13:0,51,471	0/0:7,0:6:11.98:0,12,118	0/0:11,0:10:20.74:0,21,211	0/0:27,0:25:56.43:0,56,661	0/0:12,0:9:15.04:0,15,175	0/0:5,0:5:11:0,11,76	0/1:10,0:9:21.02:51,0,21	1/1:5,0:4:1.72:5,2,0	0/0:5,0:5:6.97:0,7,67	0/0:6,0:6:4.23:0,4,39	0/0:3,0:2:5.67:0,6,36	1/1:5,0:3:2.51:7,3,0	1/1:1,4:5:10.57:112,11,0	0/1:19,2:17:30.06:30,0,33	0/1:19,0:16:2.65:3,0,37	0/0:10,0:8:20.97:0,21,242	0/0:7,0:5:9.02:0,9,93	0/0:16,0:13:14.79:0,15,171	0/0:5,0:5:10.25:0,10,58	0/0:7,0:6:12.03:0,12,133	0/0:9,0:8:18.04:0,18,232	0/0:10,0:10:13.37:0,13,128	0/0:13,0:13:16.35:0,16,158	0/0:9,0:9:18.36:0,18,216	0/0:9,0:8:7.40:0,7,160
chr10	85189833	.	CTGTGTG	C	405.66	PASS	AB=1.000;AC=11;AF=0.229;AN=48;BaseQRankSum=3.735;DP=312;FS=6.373;HRun=0;HaplotypeScore=60.1554;InbreedingCoeff=0.4603;MQ=50.85;MQ0=31;MQRankSum=-3.863;QD=8.82;ReadPosRankSum=1.245;VQSLOD=0.5715;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:21.04:0,21,443	0/0:2,0:2:3.01:0,3,43	./.	./.	0/0:9,0:8:15.04:0,15,299	0/0:14,0:13:12.04:0,12,305	0/0:22,5:25:0:0,0,0	0/0:12,0:6:2.94:0,3,18	0/0:5,0:5:3.01:0,3,42	0/0:11,0:9:6.02:0,6,141	0/0:6,0:5:3.01:0,3,56	1/1:2,3:5:3.01:59,3,0	1/1:4,1:5:3.01:53,3,0	1/1:4,0:3:3.01:50,3,0	0/0:8,0:6:6:0,6,78	1/1:2,0:4:3.01:42,3,0	0/0:26,0:24:36.58:0,37,797	1/1:19,2:19:20.85:326,21,0	0/0:11,0:8:0:0,0,0	0/1:6,0:4:0:0,0,0	0/0:17,0:13:6.89:0,7,72	./.	./.	0/0:11,0:10:3.01:0,3,72	0/0:10,0:10:15.04:0,15,344	0/0:12,0:12:5.73:0,6,220	0/0:7,0:8:4.17:0,4,86	0/0:6,0:7:3.01:0,3,38
chr10	85190149	.	TAAGC	T	1041.31	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.083;DP=691;FS=0.000;HRun=0;HaplotypeScore=111.9537;InbreedingCoeff=0.9956;MQ=84.21;MQ0=0;MQRankSum=-2.196;QD=41.65;ReadPosRankSum=1.965;VQSLOD=4.0806;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,172,4451	0/0:8,0:8:24.08:0,24,637	0/0:28,0:28:80.75:0,81,1847	0/0:21,0:20:34.57:0,35,1238	0/0:28,0:28:81.26:0,81,2065	0/0:16,0:16:48.16:0,48,1221	0/0:25,0:25:75.24:0,75,1988	0/0:30,0:30:90.31:0,90,2393	1/1:0,25:25:60.21:1136,60,0	0/0:22,0:22:63.19:0,63,1589	0/0:11,0:11:27.09:0,27,686	0/0:15,0:15:45.15:0,45,1218	0/0:26,0:26:78.25:0,78,2066	0/0:19,0:19:57.20:0,57,1531	0/0:26,0:26:78.25:0,78,2057	0/0:25,0:25:75.26:0,75,2034	0/0:34,0:34:99:0,99,2534	0/0:20,0:20:57.17:0,57,1500	0/0:29,0:29:81.23:0,81,2040	0/0:9,0:9:27.02:0,27,668	0/0:60,0:60:99:0,165,4180	0/0:21,0:21:51.18:0,51,1358	0/0:14,0:14:36.12:0,36,985	0/0:30,0:30:84.27:0,84,2210	0/0:19,0:19:54.19:0,54,1411	0/0:27,0:27:81.26:0,81,2053	0/0:26,0:26:75.26:0,75,1888	0/0:15,0:15:45.15:0,45,1217
chr10	85191344	.	A	AT	1785.56	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-6.367;DP=476;FS=10.996;HRun=10;HaplotypeScore=50.1708;InbreedingCoeff=0.7996;MQ=73.21;MQ0=0;MQRankSum=0.003;QD=18.22;ReadPosRankSum=1.354;VQSLOD=3.5581;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:2.41:2,0,191	0/0:7,0:7:14.95:0,15,123	0/0:11,0:11:14.95:0,15,122	0/0:9,0:10:2.52:0,3,53	0/0:20,0:20:44.92:0,45,369	0/0:18,0:18:47.91:0,48,392	0/0:20,0:20:56.90:0,57,462	0/0:25,2:27:18.95:0,19,360	0/0:21,0:21:56.91:0,57,465	0/0:16,0:17:37.96:0,38,301	0/0:12,1:14:3:0,3,220	1/1:4,16:20:48.12:507,48,0	1/1:2,10:12:27.03:275,27,0	1/1:0,11:11:30.08:320,30,0	0/0:24,0:24:62.91:0,63,517	0/0:15,0:15:35.93:0,36,295	0/0:30,0:30:74.86:0,75,615	1/1:6,18:25:56.95:579,57,0	0/0:17,0:18:43.96:0,44,347	0/0:14,0:14:29.94:0,30,246	0/0:14,0:14:35.94:0,36,295	1/1:4,10:14:27.02:275,27,0	0/0:12,0:12:29.94:0,30,242	0/0:21,1:22:27.92:0,28,432	0/0:17,2:19:0.95:0,1,214	0/0:20,0:20:47.90:0,48,391	0/0:18,0:17:35.94:0,36,296	0/0:7,0:7:17.98:0,18,148
chr10	85192230	.	T	TA	2516.93	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-6.161;DP=580;FS=3.602;HRun=1;HaplotypeScore=60.0752;InbreedingCoeff=0.8672;MQ=82.19;MQ0=0;MQRankSum=-1.493;QD=26.49;ReadPosRankSum=1.391;VQSLOD=3.5904;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:39:99:0,117,1511	0/0:7,0:7:21.06:0,21,257	0/0:18,0:20:40.47:0,40,566	0/1:21,0:20:22.32:22,0,336	0/0:23,0:23:66.19:0,66,819	0/0:19,0:18:57.17:0,57,723	0/0:23,0:23:69.19:0,69,853	0/0:22,0:22:54.15:0,54,653	0/0:23,0:23:69.18:0,69,875	0/0:26,0:26:78.22:0,78,982	0/0:19,0:19:54.14:0,54,659	1/1:1,13:14:33.11:482,33,0	1/1:3,22:25:60.20:873,60,0	1/1:0,13:13:33.11:482,33,0	0/0:22,0:22:66.17:0,66,812	0/0:18,0:18:48.16:0,48,621	0/0:19,0:19:54.18:0,54,698	0/0:13,0:13:39.13:0,39,504	0/0:23,0:23:60.17:0,60,740	0/0:20,0:20:60.18:0,60,762	0/0:23,0:23:66.19:0,66,827	1/1:1,21:22:60.07:824,60,0	0/0:26,0:26:75.21:0,75,941	0/0:20,0:20:54.15:0,54,671	0/0:15,0:15:45.13:0,45,547	0/0:23,0:23:69.21:0,69,881	0/0:25,0:24:72.17:0,72,863	0/0:15,0:15:42.14:0,42,543
chr10	85193345	.	G	GAGA	6269.12	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-5.841;DP=672;FS=8.216;HRun=0;HaplotypeScore=95.7580;InbreedingCoeff=0.9840;MQ=78.30;MQ0=0;MQRankSum=-2.389;QD=59.71;ReadPosRankSum=0.509;VQSLOD=6.5180;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,175,2834	0/0:3,0:3:9.03:0,9,151	0/0:16,0:16:42.08:0,42,590	0/0:21,0:22:47.81:0,48,811	0/0:17,0:17:51.16:0,51,830	0/0:17,0:17:45.15:0,45,767	0/0:22,0:22:66.21:0,66,1086	0/0:25,0:25:72.22:0,72,1144	0/0:22,0:22:66.20:0,66,1046	0/0:21,0:21:60.19:0,60,985	0/0:21,0:21:54.17:0,54,894	1/1:4,24:28:84.23:1799,84,0	1/1:3,18:21:60.16:1263,60,0	1/1:4,26:30:78.25:1723,78,0	0/0:32,0:32:93.32:0,93,1557	0/0:24,0:24:69.21:0,69,1111	0/0:34,0:34:96.28:0,96,1567	0/0:28,0:28:78.23:0,78,1250	0/0:21,0:21:48.16:0,48,818	0/0:19,0:19:54.17:0,54,881	0/0:32,0:32:87.21:0,87,1436	1/1:3,22:26:69.15:1484,69,0	0/0:22,0:22:54.17:0,54,895	0/0:20,0:20:60.21:0,60,1023	0/0:17,0:17:48.16:0,48,819	0/0:36,0:36:99:0,99,1637	0/0:21,0:21:63.20:0,63,1035	0/0:15,0:15:45.14:0,45,741
chr10	85193429	.	TC	T	2486.67	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.829;DP=540;FS=0.471;HRun=2;HaplotypeScore=54.7757;InbreedingCoeff=0.9820;MQ=91.32;MQ0=0;MQRankSum=-2.520;QD=35.02;ReadPosRankSum=3.599;VQSLOD=3.8787;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1777	0/0:8,0:8:24.08:0,24,360	0/0:22,0:21:60.19:0,60,841	0/0:22,0:22:63.20:0,63,904	0/0:16,0:16:48.16:0,48,717	0/0:17,0:17:51.17:0,51,763	0/0:23,0:23:60.20:0,60,898	0/0:28,0:28:84.28:0,84,1242	0/0:18,0:18:54.18:0,54,809	0/0:17,0:17:48.16:0,48,717	0/0:16,0:16:48.16:0,48,711	1/1:1,19:20:60.20:779,60,0	1/1:0,15:15:45.15:584,45,0	1/1:1,17:18:51.17:662,51,0	0/0:19,0:19:57.18:0,57,834	0/0:16,0:16:48.16:0,48,713	0/0:26,0:26:75.24:0,75,1102	0/0:31,0:31:93.31:0,93,1386	0/0:22,0:22:66.22:0,66,989	0/0:9,0:9:27.08:0,27,384	0/0:21,0:21:63.17:0,63,919	1/1:3,15:18:48.16:622,48,0	0/0:7,0:7:21.07:0,21,315	0/0:22,0:22:66.22:0,66,989	0/0:11,0:11:33.09:0,33,458	0/0:27,0:27:75.25:0,75,1106	0/0:26,0:25:75.25:0,75,1122	0/0:3,0:3:9.03:0,9,135
chr10	85194352	.	G	GCTTTTCTGGGT	4285.90	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.665;DP=451;FS=12.470;HRun=0;HaplotypeScore=165.3574;InbreedingCoeff=0.9185;MQ=83.19;MQ0=0;MQRankSum=-7.886;QD=133.93;ReadPosRankSum=2.046;VQSLOD=5.4324;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,2:3:6.02:296,6,0	0/0:7,0:7:21.06:0,21,586	0/0:19,0:19:29.84:0,30,1519	0/0:12,0:12:27.09:0,27,789	0/0:22,0:22:63.22:0,63,2183	0/0:17,0:17:51.18:0,51,1863	0/0:2,0:2:2.96:0,3,19	0/0:18,0:18:51.18:0,51,1842	0/0:11,0:11:30.10:0,30,1119	0/0:16,0:16:48.16:0,48,1744	0/0:24,0:24:72.25:0,72,2657	1/1:2,4:7:18.06:799,18,0	1/1:1,5:6:15.05:776,15,0	1/1:0,4:4:12.04:621,12,0	0/0:15,0:15:36.12:0,36,1336	1/1:0,2:3:9.03:450,9,0	0/0:41,0:41:99:0,117,4256	1/1:0,5:5:15.05:787,15,0	0/0:25,0:25:75.17:0,75,2429	0/0:23,0:23:66.23:0,66,2419	0/0:34,0:34:96.33:0,96,3273	1/1:0,4:4:12.04:556,12,0	0/0:18,0:18:54.19:0,54,1800	0/0:24,0:24:60.13:0,60,2034	0/0:23,0:22:69.24:0,69,2572	0/0:23,0:23:66.21:0,66,2239	0/0:28,0:28:81.09:0,81,2855	0/0:17,0:17:51.18:0,51,1903
chr10	85194353	.	A	AGGTGTCGCCTAGG	11917.21	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.131;DP=503;FS=20.757;HRun=0;HaplotypeScore=228.3114;InbreedingCoeff=0.9909;MQ=77.57;MQ0=0;MQRankSum=-13.888;QD=124.14;ReadPosRankSum=1.123;VQSLOD=3.0602;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:8:10.94:561,11,0	0/0:6,0:6:18.06:0,18,509	0/0:17,0:18:33.45:0,33,1575	0/0:11,0:11:24.08:0,24,783	0/0:22,0:22:66.19:0,66,2332	0/0:17,0:17:51.18:0,51,2071	1/1:17,0:17:48.02:1381,48,0	0/0:18,0:18:51.18:0,51,1997	0/0:10,0:10:30.10:0,30,1257	0/0:16,0:16:48.16:0,48,1954	0/0:24,0:24:72.25:0,72,2956	1/1:11,4:16:42.07:1884,42,0	1/1:5,5:10:27.09:1482,27,0	1/1:7,4:11:33.11:1905,33,0	0/0:14,0:14:36.12:0,36,1433	1/1:6,3:9:24.08:1152,24,0	0/0:41,0:41:99:0,120,4705	1/1:4,5:9:27.09:1596,27,0	0/0:23,0:23:69.22:0,69,2676	0/0:23,0:23:66.23:0,66,2678	0/0:34,0:34:96.32:0,96,3601	1/1:11,4:15:42.09:1956,42,0	0/0:18,0:18:54.15:0,54,1886	0/0:22,0:22:54.19:0,54,2195	0/0:23,0:22:69.24:0,69,2880	0/0:23,0:23:66.21:0,66,2481	0/0:27,0:27:75.97:0,76,3146	0/0:17,0:17:51.18:0,51,2140
chr10	85197231	.	G	GTTTT	32.90	PASS	AB=0.823;AC=8;AF=0.143;AN=56;BaseQRankSum=3.305;DP=561;FS=0.881;HRun=12;HaplotypeScore=112.1920;InbreedingCoeff=0.1630;MQ=78.35;MQ0=10;MQRankSum=-1.308;QD=0.20;ReadPosRankSum=-2.721;VQSLOD=-0.2562;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,3:29:3.01:48,3,0	0/0:5,0:5:8.93:0,9,109	0/1:45,0:28:4.67:5,0,38	0/1:30,0:14:12.94:13,0,60	0/0:22,0:24:36.10:0,36,492	0/0:19,0:19:16.56:0,17,486	0/1:21,0:19:22.66:23,0,43	0/0:29,0:30:24.27:0,24,646	0/0:4,0:15:32.80:0,33,255	0/0:18,0:18:32.71:0,33,387	0/0:8,0:9:10.17:0,10,121	0/1:6,0:13:3.27:3,0,46	0/1:5,0:13:8.21:35,0,8	0/1:7,0:14:3.35:28,0,3	0/0:11,0:12:6.91:0,7,244	0/0:2,0:10:23.56:0,24,191	0/0:30,0:34:68.19:0,68,812	0/0:28,0:27:55.10:0,55,601	0/0:14,0:17:23.93:0,24,267	0/0:20,0:20:39.47:0,39,481	0/0:18,0:18:15.41:0,15,355	0/0:2,0:6:1.81:0,2,6	0/0:16,0:18:31.22:0,31,378	0/0:22,0:25:47.32:0,47,548	0/0:19,0:20:41.73:0,42,473	0/0:23,0:24:44.01:0,44,585	0/0:27,0:26:64.01:0,64,776	0/0:12,0:13:16.22:0,16,195
chr10	85197242	.	TTCTTTTC	T	345.95	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=3.192;DP=513;FS=0.000;HRun=0;HaplotypeScore=117.9307;InbreedingCoeff=0.2892;MQ=68.20;MQ0=18;MQRankSum=-3.064;QD=3.72;ReadPosRankSum=-3.629;VQSLOD=1.1786;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:25:14.27:14,0,32	0/0:5,0:5:12.04:0,12,394	0/0:39,0:18:16.18:0,16,143	0/1:26,0:9:11.70:12,0,121	0/0:26,0:25:51.73:0,52,1632	0/0:19,0:19:50.87:0,51,1469	1/1:3,6:13:21.07:428,21,0	0/0:30,0:30:27.34:0,27,1768	0/0:12,0:12:36.12:0,36,801	0/0:16,0:15:38.96:0,39,1093	0/0:9,0:9:20.92:0,21,529	0/1:10,0:10:3.27:3,0,578	0/0:14,0:13:39.11:0,39,814	0/0:13,0:13:26.04:0,26,617	0/0:11,0:10:13.58:0,14,850	0/0:10,0:10:27.09:0,27,662	0/0:32,0:30:84.14:0,84,2582	0/0:34,0:31:79.61:0,80,2095	0/0:13,0:12:36.12:0,36,854	0/0:16,0:16:38.71:0,39,1101	0/1:15,0:15:5.96:6,0,952	0/0:7,0:7:18.53:0,19,411	0/0:16,0:16:44.74:0,45,1134	0/0:21,0:21:56.86:0,57,1754	0/0:16,0:16:44.63:0,45,1036	0/0:23,0:23:61.07:0,61,1752	0/0:28,0:26:75.10:0,75,2303	0/0:9,0:9:27.09:0,27,733
chr10	85197249	.	CTTTTT	C	205.34	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.390;DP=497;FS=7.568;HRun=9;HaplotypeScore=94.4317;InbreedingCoeff=0.8033;MQ=58.63;MQ0=18;MQRankSum=-3.688;QD=12.08;ReadPosRankSum=-0.324;VQSLOD=-0.6633;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:5.98:0,6,85	0/0:6,0:6:15.04:0,15,389	0/0:30,0:11:15.39:0,15,134	0/0:20,0:4:6.96:0,7,129	0/0:24,0:23:60.19:0,60,1434	0/0:18,0:18:54.11:0,54,1231	1/1:10,7:14:23.87:298,24,0	0/0:29,0:29:78.06:0,78,1571	0/0:13,0:13:39.09:0,39,784	0/0:14,0:13:36.08:0,36,819	0/0:7,0:8:21.07:0,21,486	0/0:9,0:9:24.04:0,24,623	0/0:15,0:14:42.13:0,42,880	0/0:14,0:14:31.82:0,32,644	0/0:13,0:12:35.20:0,35,794	0/0:10,0:10:27.09:0,27,653	0/0:36,0:34:96.22:0,96,2329	0/0:33,0:29:83.24:0,83,1902	0/0:13,0:12:33.10:0,33,672	0/0:14,0:14:39.07:0,39,878	0/0:15,0:15:22.57:0,23,804	0/0:9,0:9:23.32:0,23,455	0/0:15,0:15:45.05:0,45,993	0/0:22,0:22:60.18:0,60,1637	0/0:15,0:15:38.78:0,39,862	0/0:23,0:23:60.18:0,60,1391	0/0:25,0:24:72.21:0,72,1994	0/0:9,0:9:24.08:0,24,546
chr10	85198116	.	G	GGAA	1980.57	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.360;DP=537;FS=0.641;HRun=0;HaplotypeScore=85.1402;InbreedingCoeff=0.9982;MQ=78.30;MQ0=0;MQRankSum=-7.684;QD=50.78;ReadPosRankSum=-4.022;VQSLOD=4.4344;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,32:39:99:2075,105,0	0/0:11,0:11:33.10:0,33,515	0/0:12,0:12:33.58:0,34,526	0/0:15,0:15:35.38:0,35,528	0/0:19,0:19:51.17:0,51,833	0/0:19,0:19:54.18:0,54,882	0/0:24,0:24:69.24:0,69,1124	0/0:19,0:19:51.17:0,51,806	0/0:20,0:20:57.19:0,57,931	0/0:18,0:18:51.16:0,51,790	0/0:16,0:16:42.08:0,42,682	0/0:19,0:19:57.19:0,57,929	0/0:16,0:16:48.16:0,48,770	0/0:14,0:14:39.12:0,39,613	0/0:16,0:16:48.16:0,48,783	0/0:10,0:10:30.10:0,30,488	0/0:32,0:32:87.30:0,87,1412	0/0:17,0:17:45.15:0,45,735	0/0:24,0:24:72.25:0,72,1176	0/0:17,0:17:51.17:0,51,826	0/0:27,0:27:80.94:0,81,1285	0/0:17,0:17:45.15:0,45,726	0/0:12,0:12:33.10:0,33,516	0/0:29,0:29:87.30:0,87,1421	0/0:17,0:17:48.15:0,48,760	0/0:24,0:24:69.21:0,69,1080	0/0:23,0:23:66.23:0,66,1077	0/0:11,0:11:33.08:0,33,486
chr10	85198132	.	A	AAAC	1839.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.554;DP=525;FS=0.726;HRun=0;HaplotypeScore=81.2978;InbreedingCoeff=0.9951;MQ=80.14;MQ0=0;MQRankSum=-8.037;QD=55.75;ReadPosRankSum=1.007;VQSLOD=5.3999;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:33:81.28:1935,81,0	0/0:9,0:9:27.09:0,27,503	0/0:14,0:14:39.13:0,39,727	0/0:13,0:14:26.50:0,27,472	0/0:18,0:18:54.19:0,54,1006	0/0:20,0:20:60.21:0,60,1119	0/0:21,0:21:63.22:0,63,1173	0/0:21,0:21:54.19:0,54,988	0/0:19,0:19:54.19:0,54,1007	0/0:21,0:21:63.21:0,63,1142	0/0:16,0:16:45.09:0,45,839	0/0:19,0:19:57.20:0,57,1063	0/0:13,0:13:39.13:0,39,719	0/0:11,0:11:33.11:0,33,615	0/0:17,0:17:51.17:0,51,943	0/0:11,0:11:33.11:0,33,595	0/0:31,0:31:93.31:0,93,1703	0/0:16,0:16:48.16:0,48,874	0/0:26,0:26:78.26:0,78,1424	0/0:19,0:19:54.19:0,54,1006	0/0:29,0:29:87.30:0,87,1611	0/0:15,0:15:45.15:0,45,839	0/0:14,0:14:42.14:0,42,773	0/0:28,0:28:84.29:0,84,1555	0/0:17,0:17:51.17:0,51,951	0/0:22,0:22:66.22:0,66,1201	0/0:23,0:23:66.23:0,66,1221	0/0:8,0:8:24.08:0,24,423
chr10	85198940	.	CTGTGTGTG	C	512.80	PASS	AB=0.946;AC=19;AF=0.413;AN=46;BaseQRankSum=2.833;DP=483;FS=1.502;HRun=0;HaplotypeScore=119.0839;InbreedingCoeff=0.3045;MQ=63.97;MQ0=27;MQRankSum=-2.460;QD=3.33;ReadPosRankSum=1.003;VQSLOD=2.4335;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:26:3.01:41,3,0	0/0:5,0:5:2.99:0,3,24	./.	./.	0/0:14,0:14:9.03:0,9,163	0/0:19,0:17:3.01:0,3,95	1/1:17,0:14:0.57:2,1,0	0/0:24,0:22:1.25:0,1,3	1/1:8,0:12:2.97:21,3,0	./.	0/0:10,0:12:7.81:0,8,54	1/1:11,2:12:0.41:36,0,0	1/1:10,2:12:11.98:237,12,0	./.	1/1:17,1:18:3.01:53,3,0	0/0:10,0:14:2.99:0,3,25	0/1:14,0:15:37.83:38,0,118	1/1:12,0:10:6.02:110,6,0	0/0:14,0:12:0.47:0,0,1	./.	0/0:39,0:36:5.96:0,6,45	0/0:16,0:15:0:0,0,1	0/0:11,0:11:12.04:0,12,395	0/0:30,0:27:33.11:0,33,1107	0/0:14,0:14:12.03:0,12,273	1/1:12,2:13:4.56:73,5,0	0/1:8,0:9:25.37:25,0,38	0/1:4,0:4:13.37:13,0,22
chr10	85198992	.	GTGTGT	G	48.19	PASS	AB=0.968;AC=6;AF=0.107;AN=56;BaseQRankSum=6.460;DP=484;FS=38.019;HRun=0;HaplotypeScore=100.0574;InbreedingCoeff=0.2765;MQ=55.59;MQ0=38;MQRankSum=-2.323;QD=0.74;ReadPosRankSum=-1.874;VQSLOD=-0.0082;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:13.64:0,14,34	0/0:4,0:4:6.91:0,7,84	0/0:22,0:10:27.02:0,27,342	0/0:28,0:15:38.78:0,39,486	0/0:14,0:13:33.11:0,33,465	0/0:18,0:17:25.06:0,25,370	0/0:17,0:12:21:0,21,263	0/0:18,0:17:48.12:0,48,618	0/0:14,0:14:17.65:0,18,316	0/0:19,0:19:57.19:0,57,773	0/0:9,0:8:1.83:0,2,77	0/1:9,1:7:2.18:28,0,2	1/1:13,1:14:8.71:91,9,0	0/0:13,1:12:0.47:0,0,1	0/0:14,0:14:15.69:0,16,217	0/0:21,0:20:25.30:0,25,328	0/0:24,0:22:9.44:0,9,458	0/1:12,0:10:18.76:29,0,19	0/0:6,0:5:15.05:0,15,205	0/0:16,0:16:30.03:0,30,379	0/0:32,0:30:66.57:0,67,872	0/1:24,1:24:10.20:10,0,29	0/0:10,0:10:27.09:0,27,481	0/0:42,0:36:76.12:0,76,1365	0/0:17,0:14:24.97:0,25,403	0/0:14,0:15:3.56:0,4,479	0/0:14,1:16:12.01:0,12,339	0/1:4,0:4:8.12:8,0,72
chr10	85199001	.	G	GAG	1938.40	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=2.703;DP=525;FS=2.886;HRun=0;HaplotypeScore=84.0723;InbreedingCoeff=0.9001;MQ=62.50;MQ0=25;MQRankSum=0.708;QD=17.95;ReadPosRankSum=0.894;VQSLOD=3.8319;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:31:48.16:726,48,0	0/0:4,0:4:9.02:0,9,103	0/0:31,0:17:33.05:0,33,359	0/0:38,0:21:19.49:0,19,368	0/0:16,0:15:36.10:0,36,427	0/0:17,0:17:25.04:0,25,313	0/0:18,0:13:20.90:0,21,256	0/0:21,0:21:26.41:0,26,360	0/0:17,0:16:15.62:0,16,312	0/0:19,0:19:54.12:0,54,635	0/0:11,0:10:12.03:0,12,140	1/1:12,0:10:15.01:181,15,0	1/1:7,7:15:11.93:152,12,0	1/1:13,0:12:3.01:46,3,0	0/0:16,0:16:18.53:0,19,218	0/0:16,0:15:23.87:0,24,290	0/0:24,0:24:41.49:0,41,474	1/1:10,0:9:27.04:369,27,0	0/0:11,0:11:12.02:0,12,133	0/0:16,0:16:30.09:0,30,366	0/0:32,0:31:78.24:0,78,947	1/1:26,0:26:42.08:642,42,0	0/0:11,0:11:24.05:0,24,269	0/0:40,0:36:53.13:0,53,584	0/0:16,0:14:18.06:0,18,220	0/0:19,0:18:36.11:0,36,434	0/0:19,0:19:31.63:0,32,351	0/0:4,0:4:6:0,6,59
chr10	85199012	.	A	AGA	1938.38	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=2.472;DP=520;FS=2.061;HRun=0;HaplotypeScore=80.5131;InbreedingCoeff=0.9003;MQ=74.87;MQ0=12;MQRankSum=0.820;QD=19.58;ReadPosRankSum=0.619;VQSLOD=3.7208;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:32:48.16:726,48,0	0/0:4,0:4:9.02:0,9,103	0/0:38,0:23:33.52:0,34,360	0/0:44,0:27:19.49:0,19,368	0/0:19,0:19:36.10:0,36,427	0/0:21,0:21:25.04:0,25,313	0/0:20,0:17:21.06:0,21,257	0/0:19,0:19:30.09:0,30,366	0/0:14,0:15:15.62:0,16,312	0/0:19,0:19:54.12:0,54,635	0/0:10,0:10:12.03:0,12,140	1/1:12,0:11:15.01:181,15,0	1/1:11,0:11:11.93:152,12,0	1/1:2,7:10:3.01:46,3,0	0/0:18,0:18:18.53:0,19,218	0/0:15,0:15:24.07:0,24,290	0/0:24,0:24:41.99:0,42,475	1/1:11,0:11:27.04:369,27,0	0/0:10,0:10:12.02:0,12,133	0/0:16,0:16:30.09:0,30,366	0/0:34,0:34:78.24:0,78,947	1/1:21,0:22:42.08:642,42,0	0/0:12,0:12:24.05:0,24,269	0/0:32,0:32:53.18:0,53,584	0/0:13,0:14:18.06:0,18,220	0/0:14,0:14:36.11:0,36,434	0/0:17,0:17:31.63:0,32,351	0/0:5,0:5:6:0,6,59
chr10	85200644	.	A	ATC	9025.18	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-14.348;DP=650;FS=0.000;HRun=0;HaplotypeScore=76.2803;InbreedingCoeff=0.9662;MQ=92.86;MQ0=0;MQRankSum=-2.845;QD=47.25;ReadPosRankSum=2.011;VQSLOD=6.2565;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,46:46:99:2199,120,0	0/0:10,0:10:27.08:0,27,369	0/0:33,0:33:66.64:0,67,1128	0/0:24,0:24:46.41:0,46,808	0/0:31,0:31:84.28:0,84,1204	0/0:24,0:24:69.20:0,69,950	1/1:1,18:19:48.16:880,48,0	0/0:23,0:23:60.20:0,60,859	0/0:20,0:20:57.18:0,57,798	0/0:26,0:26:69.23:0,69,988	0/0:12,0:12:36.12:0,36,509	1/1:0,21:21:60.21:1100,60,0	1/1:0,19:19:54.19:990,54,0	1/1:2,22:24:63.22:1155,63,0	0/0:18,0:18:54.18:0,54,773	1/1:3,14:17:2.20:727,2,0	0/0:34,0:34:93.29:0,93,1307	1/1:3,21:24:60.21:1100,60,0	0/0:24,0:24:69.23:0,69,988	0/0:33,0:33:84.28:0,84,1202	0/0:29,0:29:81.25:0,81,1140	1/1:1,19:21:48.16:874,48,0	0/0:15,0:15:45.15:0,45,644	0/0:19,0:19:57.15:0,57,793	0/0:15,0:15:42.14:0,42,601	0/0:20,0:20:60.19:0,60,842	0/0:38,0:37:99:0,102,1460	0/0:11,0:11:27.09:0,27,380
chr10	85200932	.	AG	A	733.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.960;DP=647;FS=3.729;HRun=4;HaplotypeScore=62.0566;InbreedingCoeff=0.9979;MQ=76.11;MQ0=0;MQRankSum=-1.391;QD=26.18;ReadPosRankSum=0.273;VQSLOD=2.4255;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,1835	0/0:10,0:10:30.10:0,30,420	0/0:18,0:18:49.38:0,49,618	0/0:27,0:26:42.51:0,43,883	0/0:25,0:25:69.23:0,69,960	0/0:27,0:27:80.63:0,81,1100	1/1:2,26:28:69.21:828,69,0	0/0:29,1:30:51.21:0,51,1045	0/0:19,0:19:57.18:0,57,778	0/0:17,0:17:51.16:0,51,699	0/0:12,0:12:30.09:0,30,399	0/0:26,0:26:78.25:0,78,1077	0/0:17,0:17:51.17:0,51,711	0/0:17,0:16:48.16:0,48,670	0/0:21,0:21:63.21:0,63,881	0/0:18,0:18:48.12:0,48,622	0/0:38,0:37:93.28:0,93,1267	0/0:29,0:29:87.09:0,87,1111	0/0:39,0:39:99:0,108,1495	0/0:25,0:25:69.22:0,69,941	0/0:36,0:36:99:0,108,1476	0/0:15,0:15:42.12:0,42,564	0/0:16,0:16:48.16:0,48,670	0/0:17,0:17:45.15:0,45,630	0/0:20,0:20:60.20:0,60,840	0/0:19,0:19:57.15:0,57,752	0/0:24,0:24:69.23:0,69,965	0/0:9,0:9:27.09:0,27,374
chr10	85201474	.	CGG	C	158.76	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=3.593;DP=325;FS=6.191;HRun=2;HaplotypeScore=39.5739;InbreedingCoeff=0.7413;MQ=40.39;MQ0=43;MQRankSum=0.206;QD=6.90;ReadPosRankSum=-0.768;VQSLOD=-0.2253;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:15:23.97:0,24,350	0/0:9,0:9:21.07:0,21,286	./.	0/0:18,0:2:3.56:0,4,13	0/0:21,0:20:20.30:0,20,243	0/0:11,0:8:18.05:0,18,221	./.	0/0:15,0:13:32.83:0,33,375	0/0:7,0:6:15.03:0,15,206	0/0:11,0:9:24.05:0,24,306	0/0:8,1:9:18.04:0,18,247	1/1:2,5:5:3.01:39,3,0	1/1:1,8:7:3.01:38,3,0	1/1:4,0:2:6.02:94,6,0	0/0:8,0:5:9.01:0,9,124	0/0:5,0:4:12.03:0,12,176	0/0:16,0:10:21.05:0,21,316	0/0:18,0:14:24.03:0,24,312	0/0:15,0:11:30.08:0,30,396	0/0:17,0:14:29.67:0,30,354	0/0:10,0:10:21.07:0,21,306	1/1:3,0:3:9.02:113,9,0	0/0:11,0:9:21.07:0,21,304	0/0:10,0:8:9.03:0,9,121	0/0:9,0:7:18.05:0,18,282	0/0:16,0:15:30.07:0,30,425	0/0:9,0:6:15.03:0,15,222	0/0:28,0:24:56.41:0,56,625
chr10	85201645	.	GCACAAACACACA	G	560.14	PASS	AB=1.000;AC=5;AF=0.093;AN=54;BaseQRankSum=4.832;DP=425;FS=2.966;HRun=0;HaplotypeScore=143.4527;InbreedingCoeff=0.3059;MQ=56.74;MQ0=14;MQRankSum=-3.276;QD=17.50;ReadPosRankSum=3.013;VQSLOD=2.6628;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:56.04:0,56,1248	0/0:9,0:9:25.20:0,25,551	0/0:6,0:2:2.74:0,3,12	./.	0/0:18,0:16:32.66:0,33,467	0/0:20,0:18:36.48:0,36,1016	0/0:25,0:25:54.47:0,54,1144	0/0:17,0:16:44.91:0,45,819	0/0:12,0:12:18.82:0,19,137	0/0:15,0:14:40.20:0,40,1213	0/0:11,0:9:18.05:0,18,522	0/1:12,0:12:38.13:117,0,38	0/1:9,0:9:47.06:47,0,82	0/0:4,0:4:11.80:0,12,80	0/0:17,0:16:21.06:0,21,745	1/1:2,6:8:12.04:444,12,0	0/0:21,0:21:54.14:0,54,1800	0/0:27,0:27:60.40:0,60,917	0/0:15,0:13:35.54:0,36,671	0/0:16,0:16:44.34:0,44,885	0/0:25,0:22:50.24:0,50,1285	0/1:3,0:3:11.08:71,0,11	0/0:15,0:15:31.42:0,31,651	0/0:37,0:37:87.08:0,87,2787	0/0:8,0:8:18.01:0,18,646	0/0:17,0:17:42.04:0,42,991	0/0:8,0:7:20.48:0,20,312	0/0:9,0:8:18.04:0,18,637
chr10	85201650	.	AAC	A	1136.48	PASS	AB=0.899;AC=35;AF=0.700;AN=50;BaseQRankSum=2.629;DP=440;FS=0.000;HRun=0;HaplotypeScore=84.3774;InbreedingCoeff=0.2969;MQ=55.75;MQ0=18;MQRankSum=-0.193;QD=3.73;ReadPosRankSum=1.825;VQSLOD=1.8095;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:35:10.81:0,11,81	1/1:9,0:9:2.93:24,3,0	./.	./.	0/0:17,0:15:0:0,0,0	0/1:15,4:17:5.71:6,0,119	0/1:23,0:26:3.82:4,0,138	1/1:16,0:15:4.17:39,4,0	1/1:5,0:13:5.40:27,5,0	0/1:15,0:14:26.58:27,0,39	1/1:5,6:9:9.02:98,9,0	1/1:2,0:12:5.65:28,6,0	1/1:5,0:9:2.84:14,3,0	./.	0/1:9,8:17:29.76:97,0,30	1/1:7,0:7:11.36:56,11,0	1/1:13,12:25:30.07:324,30,0	1/1:14,1:25:14.37:88,14,0	1/1:12,4:14:14.23:117,14,0	1/1:16,0:16:5.88:41,6,0	1/1:26,1:24:8.82:149,9,0	1/1:1,0:4:2.80:13,3,0	0/0:17,0:17:5.63:0,6,59	0/0:33,0:33:13.32:0,13,364	0/0:12,0:11:5.61:0,6,67	1/1:12,4:16:5.01:64,5,0	0/1:9,0:8:0.55:54,0,1	1/1:10,0:9:2.83:15,3,0
chr10	85201882	.	GTCTCTCTC	G	1558.26	PASS	AB=0.917;AC=21;AF=0.457;AN=46;BaseQRankSum=3.133;DP=463;FS=2.449;HRun=0;HaplotypeScore=127.8997;InbreedingCoeff=0.6489;MQ=71.94;MQ0=22;MQRankSum=3.405;QD=9.56;ReadPosRankSum=2.208;VQSLOD=2.5384;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:24:25.09:0,25,278	./.	0/0:31,0:23:6.47:0,6,68	./.	0/0:10,0:12:2.98:0,3,21	0/0:12,0:10:4.64:0,5,80	0/0:28,0:27:16.61:0,17,395	1/1:19,0:22:8.92:80,9,0	./.	1/1:10,0:14:15.04:285,15,0	0/1:8,0:11:0:0,0,0	0/1:13,0:12:1.21:1,0,234	0/0:13,0:12:18.01:0,18,348	0/0:13,0:13:6.02:0,6,114	1/1:11,0:13:3:26,3,0	./.	1/1:7,0:7:9.03:193,9,0	0/0:11,0:10:11.81:0,12,276	1/1:10,3:12:9.03:189,9,0	./.	1/1:22,0:20:12.04:294,12,0	0/1:8,0:8:1.96:2,0,164	0/0:14,0:14:18.43:0,18,430	0/0:37,0:33:46.44:0,46,1154	0/0:13,0:13:12.04:0,12,212	1/1:8,6:15:21.07:475,21,0	1/1:4,6:10:2.96:68,3,0	1/1:12,0:11:6.02:109,6,0
chr10	85201927	.	TCACACA	T	165.90	PASS	AB=1.000;AC=5;AF=0.104;AN=48;BaseQRankSum=0.790;DP=473;FS=27.821;HRun=0;HaplotypeScore=113.7624;InbreedingCoeff=0.1466;MQ=43.68;MQ0=52;MQRankSum=0.543;QD=2.68;ReadPosRankSum=0.146;VQSLOD=0.5486;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:36:39.07:0,39,891	0/1:6,0:6:9.97:10,0,139	./.	./.	0/0:7,0:7:3.01:0,3,75	0/1:24,0:22:53.72:73,0,54	0/0:32,0:28:6.27:0,6,96	0/0:17,0:14:3.01:0,3,61	0/0:19,0:17:15.94:0,16,363	0/0:13,0:12:16.64:0,17,195	0/0:12,0:11:6.02:0,6,150	1/1:16,0:13:8.61:171,9,0	0/0:15,0:14:0:0,0,0	./.	0/0:10,0:9:9.03:0,9,215	0/1:16,0:15:19.61:20,0,322	0/0:14,0:13:3.43:0,3,243	0/0:18,0:15:22.63:0,23,448	0/0:16,0:14:15.42:0,15,386	0/0:18,0:15:17.73:0,18,438	0/0:28,0:22:5.95:0,6,99	./.	0/0:14,0:13:12.04:0,12,277	0/0:43,0:36:33.09:0,33,752	0/0:20,0:18:15.04:0,15,310	0/0:17,0:14:12.01:0,12,186	0/0:21,0:20:5.53:0,6,500	0/0:7,0:4:3.01:0,3,70
chr10	85202491	.	A	ATG	68.94	PASS	AB=0.545;AC=3;AF=0.054;AN=56;BaseQRankSum=3.254;DP=424;FS=3.828;HRun=0;HaplotypeScore=63.1350;InbreedingCoeff=0.4100;MQ=62.42;MQ0=17;MQRankSum=-1.528;QD=1.60;ReadPosRankSum=-1.008;VQSLOD=1.3367;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:4,20:23:24.55:102,0,25	0/0:9,0:9:24:0,24,324	0/0:14,0:8:22.29:0,22,276	0/0:26,0:16:15.85:0,16,419	0/0:15,0:14:33.11:0,33,490	0/0:14,0:12:28.89:0,29,360	0/0:23,0:20:40.95:0,41,493	0/0:19,0:19:48.12:0,48,689	0/0:17,0:17:41.82:0,42,587	0/0:7,0:7:21:0,21,278	0/0:4,0:4:8.82:0,9,137	0/0:18,0:18:46.94:0,47,534	0/0:5,0:4:12.04:0,12,182	0/0:15,0:14:33.11:0,33,469	0/0:12,0:12:27.06:0,27,362	0/0:12,0:12:32.98:0,33,478	0/0:22,0:20:39.13:0,39,560	1/1:3,16:17:3.01:58,3,0	0/0:9,0:8:20.89:0,21,271	0/0:15,0:15:30.01:0,30,428	0/0:28,0:28:53.35:0,53,731	0/0:11,0:9:18.04:0,18,263	0/0:12,0:12:33.08:0,33,443	0/0:30,0:27:66.02:0,66,875	0/0:12,0:12:27.54:0,28,404	0/0:9,0:9:27.08:0,27,394	0/0:6,0:6:9.03:0,9,123	0/0:16,0:16:42.14:0,42,621
chr10	85202493	.	GGAGA	G	288.86	PASS	AB=1.000;AC=15;AF=0.313;AN=48;BaseQRankSum=1.802;DP=443;FS=1.264;HRun=0;HaplotypeScore=69.0024;InbreedingCoeff=0.2385;MQ=58.75;MQ0=19;MQRankSum=-0.478;QD=1.70;ReadPosRankSum=2.145;VQSLOD=0.9863;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:21:13.90:37,0,14	0/0:10,0:10:1.95:0,2,6	./.	./.	0/0:16,0:15:3.47:0,3,25	0/0:17,0:15:3.01:0,3,46	0/0:23,0:19:0.46:0,0,1	0/0:17,0:17:0.47:0,0,1	0/0:17,0:16:6.22:0,6,48	1/1:8,0:8:2.95:22,3,0	0/0:4,0:4:0:0,0,0	1/1:20,0:20:6.01:58,6,0	./.	0/0:16,0:15:1.97:0,2,7	1/1:8,4:12:3.01:46,3,0	0/0:11,0:12:2.84:0,3,17	1/1:12,11:22:6.01:74,6,0	0/0:19,0:17:3.01:0,3,44	0/0:12,0:11:1.72:0,2,4	0/0:15,0:15:0:0,0,0	1/1:29,0:29:5.73:51,6,0	./.	0/0:12,0:12:8.69:0,9,87	0/1:31,0:28:62.56:63,0,322	0/0:15,0:15:8.95:0,9,76	0/0:13,0:13:2.88:0,3,15	1/1:7,0:7:3:29,3,0	0/1:16,0:16:29.30:36,0,29
chr10	85202537	.	AGAGAGAGCGCGCGAGCGC	A	661.60	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=4.328;DP=582;FS=1.084;HRun=0;HaplotypeScore=187.5274;InbreedingCoeff=0.7610;MQ=52.86;MQ0=55;MQRankSum=-3.358;QD=14.70;ReadPosRankSum=-2.259;VQSLOD=2.4326;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:26:38.38:0,38,1058	0/0:14,0:13:28.91:0,29,1099	0/0:13,0:3:5.93:0,6,102	0/0:37,0:8:5.64:0,6,105	0/0:19,0:17:27.09:0,27,1051	0/0:21,0:19:33.11:0,33,1195	1/1:26,0:21:21.29:562,21,0	0/0:21,0:18:42.98:0,43,776	0/0:20,0:18:30.10:0,30,1154	0/0:25,0:24:59.16:0,59,2252	0/0:19,0:19:42.14:0,42,1832	0/0:26,0:27:5.38:0,5,78	0/0:13,0:11:21.81:0,22,344	0/0:17,0:17:27.57:0,28,304	0/0:14,0:13:21.07:0,21,889	1/1:6,13:18:9.03:211,9,0	0/0:32,0:27:38.75:0,39,1747	0/0:21,0:18:27.79:0,28,216	0/0:14,0:12:34.15:0,34,841	0/0:14,0:14:20.45:0,20,490	0/0:29,0:28:39.38:0,39,1234	./.	0/0:15,0:15:27.09:0,27,1190	0/0:37,0:34:56.84:0,57,3798	0/0:17,0:16:30.10:0,30,1406	0/0:15,0:14:39:0,39,1166	0/0:18,0:18:6.66:0,7,142	0/0:16,0:13:11:0,11,548
chr10	85202539	.	AGAGAGCGC	A	1926.99	PASS	AB=0.990;AC=21;AF=0.389;AN=54;BaseQRankSum=6.927;DP=580;FS=13.827;HRun=0;HaplotypeScore=118.3545;InbreedingCoeff=0.4374;MQ=54.14;MQ0=55;MQRankSum=-1.969;QD=6.88;ReadPosRankSum=-0.912;VQSLOD=1.3050;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:23:4.64:46,5,0	0/0:14,0:13:25.95:0,26,389	0/0:14,0:4:6.02:0,6,88	0/0:37,0:8:10.69:0,11,71	0/0:19,0:17:30.29:0,30,444	0/0:20,0:18:32.31:0,32,439	1/1:28,0:23:17.89:218,18,0	1/1:21,0:18:21.21:62,21,0	0/0:18,0:16:29.83:0,30,414	0/0:25,0:24:59.52:0,60,834	0/0:19,0:19:44.81:0,45,644	1/1:4,19:23:5.61:155,6,0	1/1:14,0:12:26.07:396,26,0	1/1:21,0:20:39.85:593,40,0	0/0:15,0:14:24.08:0,24,359	0/1:18,0:17:4.68:64,0,5	0/0:32,0:27:24.26:0,24,569	0/1:20,0:17:3.50:333,0,3	0/1:13,0:11:15.37:15,0,18	0/1:13,0:14:7.17:30,0,7	0/1:32,0:31:26.74:86,0,27	./.	0/0:15,0:15:21.58:0,22,457	0/0:37,0:34:54.13:0,54,1522	0/0:18,0:17:33.09:0,33,614	0/1:14,0:13:35.98:36,0,68	1/1:1,0:19:4.77:38,5,0	0/1:15,0:12:16.59:41,0,17
chr10	85202543	.	AGCGCGCGAGCGC	A	689.05	PASS	AB=1.000;AC=5;AF=0.093;AN=54;BaseQRankSum=5.012;DP=579;FS=0.000;HRun=0;HaplotypeScore=150.3180;InbreedingCoeff=0.7281;MQ=57.63;MQ0=55;MQRankSum=-3.237;QD=10.13;ReadPosRankSum=-0.732;VQSLOD=2.2780;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:24:39.10:0,39,815	0/0:13,0:12:28.91:0,29,992	0/0:16,0:6:10.53:0,11,186	0/0:38,0:9:5.81:0,6,102	0/0:18,0:16:29.68:0,30,1138	0/0:20,0:18:33.10:0,33,1106	1/1:8,19:23:22:584,22,0	0/0:19,0:17:39.93:0,40,738	0/0:20,0:18:42.11:0,42,1399	0/0:25,0:24:59.19:0,59,2170	0/0:21,0:21:51.17:0,51,1883	0/1:23,0:23:2.86:16,0,3	0/0:15,0:13:18.66:0,19,184	0/0:19,0:18:35.73:0,36,222	0/0:16,0:15:27.03:0,27,1039	1/1:16,1:16:9.02:210,9,0	0/0:34,0:29:50.91:0,51,1780	0/0:20,0:17:8.65:0,9,133	0/0:15,0:13:37.95:0,38,824	0/0:14,0:14:29.27:0,29,649	0/0:32,0:31:48.11:0,48,1007	./.	0/0:14,0:14:27.09:0,27,996	0/0:34,0:31:70.12:0,70,3077	0/0:17,0:16:30.10:0,30,1250	0/0:14,0:13:39.13:0,39,939	0/0:19,0:19:5.49:0,5,75	0/0:14,0:11:30.99:0,31,556
chr10	85203144	.	GCAGCAGCAA	G	1727.87	PASS	AB=0.992;AC=10;AF=0.179;AN=56;BaseQRankSum=1.022;DP=438;FS=1.215;HRun=0;HaplotypeScore=121.9576;InbreedingCoeff=0.1180;MQ=66.79;MQ0=2;MQRankSum=-0.557;QD=11.37;ReadPosRankSum=0.681;VQSLOD=2.5445;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:6.04:101,0,6	0/1:6,0:6:2.96:3,0,137	0/0:24,0:14:28.66:0,29,224	0/0:27,0:20:35.04:0,35,414	0/0:6,0:6:14.98:0,15,124	0/0:10,0:10:20.13:0,20,270	0/1:16,0:16:45.61:180,0,46	0/0:8,0:7:18.04:0,18,304	1/1:1,25:26:45.15:1261,45,0	0/0:9,0:9:10.60:0,11,88	0/0:4,0:4:5.99:0,6,50	0/1:28,0:28:86.50:86,0,1027	0/0:19,0:19:19.02:0,19,1190	0/1:22,0:22:49.80:50,0,949	0/0:18,0:18:33.09:0,33,1017	0/1:13,1:14:84.97:128,0,85	0/0:32,0:32:54.05:0,54,1444	0/1:19,0:19:24.54:25,0,649	0/0:10,0:9:14.94:0,15,152	0/0:5,0:5:15:0,15,132	0/0:32,0:31:72.81:0,73,1251	0/1:6,0:6:2.46:41,0,2	0/0:7,0:7:9:0,9,79	0/0:38,0:38:99:0,108,4060	0/0:10,0:9:18.02:0,18,190	0/0:9,0:9:27:0,27,241	0/0:14,0:14:39.13:0,39,1383	0/0:4,0:4:11.99:0,12,292
chr10	85203153	.	A	ACAG	1604.72	PASS	AB=0.723;AC=17;AF=0.354;AN=48;BaseQRankSum=3.094;DP=430;FS=6.836;HRun=0;HaplotypeScore=81.8422;InbreedingCoeff=0.4732;MQ=59.00;MQ0=5;MQRankSum=-4.632;QD=9.12;ReadPosRankSum=-0.435;VQSLOD=2.1920;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:12:0.47:1,0,0	1/1:6,0:6:3.01:36,3,0	0/0:29,0:11:2.88:0,3,15	0/0:24,0:17:8.29:0,8,84	./.	0/0:13,0:13:11.86:0,12,139	0/0:16,0:16:14.89:0,15,117	0/0:8,0:7:6:0,6,52	0/0:25,0:25:37.70:0,38,235	1/1:8,0:8:9.81:94,10,0	./.	1/1:21,0:25:32.42:293,32,0	1/1:18,0:21:24.28:239,24,0	1/1:14,0:19:28.43:352,28,0	0/1:6,13:20:62.17:277,0,62	0/1:13,0:13:13.80:33,0,14	0/1:9,22:32:55.76:331,0,56	1/1:19,0:19:16.52:112,17,0	0/0:9,0:8:5.97:0,6,48	./.	0/0:34,0:32:18.01:0,18,197	./.	0/0:6,0:6:2.90:0,3,16	0/0:38,0:38:93.23:0,93,1202	0/0:8,0:7:2.92:0,3,17	0/0:11,0:11:2.99:0,3,41	0/0:13,0:13:33.03:0,33,384	0/0:4,0:4:6.02:0,6,82
chr10	85203177	.	G	GCAGCAGCAGCAGCAC	1396.56	PASS	AB=0.936;AC=7;AF=0.125;AN=56;BaseQRankSum=5.230;DP=423;FS=4.819;HRun=0;HaplotypeScore=167.6040;InbreedingCoeff=-0.1883;MQ=55.56;MQ0=8;MQRankSum=-7.175;QD=11.00;ReadPosRankSum=0.989;VQSLOD=2.6267;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:7:11.50:0,11,95	0/0:3,0:3:4.70:0,5,40	0/0:25,0:9:3.25:0,3,94	0/0:20,0:12:21.82:0,22,214	0/0:7,0:7:17.88:0,18,135	0/0:11,0:11:17.36:0,17,260	0/1:16,0:16:99:116,0,321	0/0:9,0:7:21:0,21,232	0/0:30,0:30:62.24:0,62,1182	0/0:11,0:11:5.94:0,6,172	0/0:10,0:10:15.23:0,15,123	0/1:26,0:26:99:287,0,150	0/1:21,0:21:99:165,0,133	0/1:22,0:22:99:363,0,145	0/0:19,0:18:24.07:0,24,563	0/1:3,11:16:99:215,0,127	0/0:35,0:35:45.06:0,45,750	0/1:21,0:21:94.83:360,0,95	0/1:5,0:5:17.98:18,0,68	0/0:4,0:4:5.80:0,6,45	0/0:21,0:19:44.75:0,45,717	0/0:1,0:1:3:0,3,25	0/0:4,0:4:5.87:0,6,39	0/0:37,0:39:99:0,114,3673	0/0:8,0:7:14.94:0,15,118	0/0:9,0:9:20.46:0,20,211	0/0:19,0:19:56.97:0,57,1179	0/0:2,0:2:6.02:0,6,156
chr10	85203345	.	GA	G	223.09	PASS	AB=0.542;AC=1;AF=0.018;AN=56;BaseQRankSum=4.335;DP=467;FS=7.831;HRun=7;HaplotypeScore=44.7087;InbreedingCoeff=-0.0225;MQ=74.20;MQ0=0;MQRankSum=-0.894;QD=17.16;ReadPosRankSum=0.346;VQSLOD=2.7305;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.25:0,78,981	0/0:5,0:5:15.05:0,15,189	0/0:13,0:13:22.72:0,23,301	0/0:7,0:7:21.04:0,21,248	0/0:22,0:22:66.20:0,66,817	0/0:22,0:21:60.16:0,60,726	0/0:19,0:19:54.16:0,54,666	0/0:26,0:26:69.22:0,69,867	0/0:25,0:25:75.23:0,75,930	0/0:13,0:13:33.10:0,33,411	0/0:13,0:13:39.12:0,39,480	0/0:19,0:19:51.16:0,51,635	0/0:13,0:13:6.03:0,6,384	0/0:11,0:11:33.11:0,33,415	0/0:10,0:10:30.10:0,30,377	0/1:2,11:13:36.35:298,0,36	0/0:27,0:27:72.22:0,72,894	0/0:25,0:25:72.23:0,72,906	0/0:14,0:14:39.10:0,39,457	0/0:26,0:26:66.21:0,66,830	0/0:11,0:11:30.10:0,30,377	0/0:13,0:13:39.12:0,39,478	0/0:16,0:16:45.14:0,45,566	0/0:12,0:12:36.10:0,36,435	0/0:21,0:21:63.18:0,63,778	0/0:13,0:13:36.12:0,36,453	0/0:21,0:21:57.14:0,57,699	0/0:8,0:8:24.08:0,24,302
chr10	85203477	.	T	TAA	467.49	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-2.476;DP=422;FS=1.984;HRun=11;HaplotypeScore=58.4789;InbreedingCoeff=0.6345;MQ=78.38;MQ0=0;MQRankSum=-1.264;QD=17.98;ReadPosRankSum=-0.885;VQSLOD=2.1979;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:30:83.84:0,84,791	0/0:4,0:4:11.98:0,12,108	0/0:12,0:13:29.72:0,30,260	0/1:8,0:8:3.55:4,0,22	0/0:15,0:15:26.94:0,27,252	0/0:19,0:19:45.02:0,45,429	1/1:0,16:18:39.13:562,39,0	0/0:25,0:28:60:0,60,595	0/0:20,0:20:54.07:0,54,523	0/0:14,0:14:39.04:0,39,375	0/0:10,0:10:20.98:0,21,203	0/0:20,0:22:51.60:0,52,489	0/0:8,0:8:18:0,18,167	0/0:18,0:19:47.76:0,48,441	0/0:9,0:9:14.94:0,15,145	0/0:13,0:14:23.95:0,24,282	0/0:27,0:27:69.08:0,69,669	0/0:14,0:14:35.97:0,36,328	0/0:12,0:12:24.02:0,24,233	0/0:11,0:11:21.01:0,21,204	0/0:10,0:10:24.02:0,24,233	0/0:6,0:7:5.72:0,6,41	0/0:9,0:9:18:0,18,174	0/0:17,0:18:44.74:0,45,411	0/0:13,0:13:23.96:0,24,233	0/0:12,0:13:29.99:0,30,341	0/0:24,0:26:65.54:0,66,605	0/0:11,0:11:30.01:0,30,283
chr10	85203717	.	C	CA	1372.13	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.191;DP=553;FS=0.000;HRun=9;HaplotypeScore=59.6496;InbreedingCoeff=0.8650;MQ=71.64;MQ0=0;MQRankSum=-0.659;QD=25.41;ReadPosRankSum=2.767;VQSLOD=4.2824;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:29:75.20:830,75,0	0/0:10,0:10:26.99:0,27,234	0/0:16,0:15:14.88:0,15,119	0/0:25,0:21:33.31:0,33,272	0/0:26,0:26:74.96:0,75,645	0/0:13,0:13:32.98:0,33,286	0/0:17,0:17:47.92:0,48,405	0/0:29,0:29:68.96:0,69,596	0/0:13,1:14:6.52:0,7,211	0/0:17,0:17:47.99:0,48,417	0/0:16,0:16:47.99:0,48,417	0/0:21,0:21:53.98:0,54,469	0/0:14,0:14:35.99:0,36,313	0/0:12,1:13:2.81:0,3,253	0/0:21,0:21:56.93:0,57,488	0/0:23,0:23:47.98:0,48,417	0/0:19,0:19:50.95:0,51,434	1/1:1,24:25:60.16:664,60,0	0/0:17,0:17:44.99:0,45,391	0/0:25,0:25:59.96:0,60,518	0/0:12,0:12:32.99:0,33,287	0/0:13,0:13:32.99:0,33,287	0/0:20,1:21:23.78:0,24,430	0/0:20,0:20:53.98:0,54,469	0/0:20,0:20:59.99:0,60,520	0/0:29,0:29:74.97:0,75,649	0/0:27,0:27:68.91:0,69,587	0/0:21,0:21:62.99:0,63,547
chr10	85203760	.	AGT	A	1988.96	PASS	AB=0.920;AC=16;AF=0.286;AN=56;BaseQRankSum=9.772;DP=645;FS=20.033;HRun=0;HaplotypeScore=90.9033;InbreedingCoeff=0.4386;MQ=66.44;MQ0=5;MQRankSum=-0.981;QD=8.15;ReadPosRankSum=2.863;VQSLOD=1.9172;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:54.18:0,54,854	0/0:8,0:8:24.08:0,24,382	0/1:30,1:25:2.91:3,0,439	0/0:26,0:21:33:0,33,400	0/1:25,3:27:5.29:5,0,872	0/0:17,1:18:15.40:0,15,728	0/0:9,0:19:11.89:0,12,123	0/0:39,2:41:9.84:0,10,997	0/0:1,0:16:32.99:0,33,290	0/0:34,1:35:48.47:0,48,1148	0/0:18,0:18:36.12:0,36,550	1/1:5,15:20:39.12:465,39,0	1/1:4,16:20:39.12:465,39,0	1/1:4,12:17:22.59:359,23,0	0/0:27,2:29:3.70:0,4,1027	1/1:3,0:19:28.41:140,28,0	0/0:20,1:21:12.39:0,12,675	0/1:28,2:30:17.28:17,0,701	0/0:20,0:20:39.13:0,39,567	0/0:24,0:24:60.20:0,60,926	0/1:17,2:19:32.41:32,0,475	1/1:5,16:22:54:622,54,0	0/0:17,1:18:9.33:0,9,574	0/1:19,2:21:29.40:29,0,520	0/0:24,2:26:3.71:0,4,1016	0/0:28,2:30:6.71:0,7,1047	0/0:24,0:24:66.22:0,66,1040	0/1:15,2:17:32.38:32,0,486
chr10	85206024	.	AG	A	1460.84	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=7.041;DP=347;FS=5.044;HRun=8;HaplotypeScore=38.8161;InbreedingCoeff=0.9490;MQ=89.11;MQ0=0;MQRankSum=-3.299;QD=21.48;ReadPosRankSum=0.939;VQSLOD=3.5569;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.20:0,75,881	./.	0/0:18,0:18:38.90:0,39,455	0/0:13,0:13:25.89:0,26,295	0/0:11,0:11:33.09:0,33,389	0/0:8,0:8:18.06:0,18,217	1/1:3,18:21:48.07:464,48,0	0/0:11,0:11:24.07:0,24,287	0/0:9,0:9:27.07:0,27,316	0/0:17,0:17:42.13:0,42,507	0/0:13,0:13:36.10:0,36,423	1/1:0,8:8:24.04:232,24,0	1/1:2,6:8:20.71:185,21,0	1/1:2,19:21:51.08:492,51,0	0/0:11,0:11:33.09:0,33,389	0/0:11,0:11:30.09:0,30,362	0/0:24,0:24:63.15:0,63,735	0/0:19,0:19:54.15:0,54,632	0/0:7,0:7:18.06:0,18,217	0/0:15,0:15:45.14:0,45,543	0/0:11,0:11:27.04:0,27,310	1/1:1,9:10:27.04:261,27,0	0/0:11,0:11:30.08:0,30,350	0/0:9,0:9:27.06:0,27,312	0/0:5,0:5:15.05:0,15,181	0/0:11,0:11:24.03:0,24,265	0/0:19,0:18:57.15:0,57,673	0/0:1,0:1:3.01:0,3,36
chr10	85206193	.	CCTA	C	3009.50	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.602;DP=436;FS=5.636;HRun=0;HaplotypeScore=61.0498;InbreedingCoeff=0.9466;MQ=91.77;MQ0=0;MQRankSum=-3.261;QD=43.62;ReadPosRankSum=1.434;VQSLOD=4.7697;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.26:0,81,1800	0/0:3,0:3:9.03:0,9,184	0/0:20,0:20:48.45:0,48,1028	0/0:17,0:17:42.14:0,42,886	0/0:12,0:12:36.12:0,36,808	0/0:17,0:17:51.17:0,51,1132	0/0:11,0:11:33.11:0,33,760	0/0:27,0:27:75.26:0,75,1713	0/0:14,0:14:42.14:0,42,945	0/0:15,0:15:45.15:0,45,994	0/0:11,0:11:33.11:0,33,730	1/1:0,22:22:63.22:1073,63,0	1/1:0,12:12:33.11:563,33,0	1/1:1,29:30:78.27:1328,78,0	0/0:11,0:11:33.11:0,33,761	0/0:19,0:18:57.20:0,57,1284	0/0:27,0:27:75.26:0,75,1726	0/0:12,0:12:36.12:0,36,808	0/0:23,0:23:69.24:0,69,1591	0/0:10,0:10:30.07:0,30,644	0/0:10,0:10:30.10:0,30,666	1/1:0,5:5:12.04:203,12,0	0/0:11,0:11:30.09:0,30,646	0/0:16,0:16:45.11:0,45,987	0/0:14,0:14:42.14:0,42,969	0/0:14,0:14:42.14:0,42,969	0/0:21,0:21:63.20:0,63,1385	0/0:5,0:5:6.02:0,6,138
chr10	85207147	.	GT	G	3742.61	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.671;DP=712;FS=9.726;HRun=4;HaplotypeScore=70.5734;InbreedingCoeff=0.9995;MQ=94.00;MQ0=0;MQRankSum=-4.204;QD=31.45;ReadPosRankSum=2.125;VQSLOD=3.9306;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:99:0,120,1661	0/0:10,0:10:27.09:0,27,378	0/0:34,0:34:93.13:0,93,1209	0/0:32,0:32:84.25:0,84,1151	0/0:17,0:17:51.16:0,51,698	0/0:13,0:13:36.11:0,36,489	1/1:3,25:28:72.22:864,72,0	0/0:30,0:30:84.27:0,84,1160	0/0:30,0:30:78.22:0,78,1040	0/0:25,0:25:75.25:0,75,1050	0/0:18,0:18:48.16:0,48,672	1/1:0,33:33:93.29:1115,93,0	1/1:1,16:17:42.01:504,42,0	1/1:0,21:21:54.17:648,54,0	0/0:32,0:32:96.32:0,96,1344	0/0:17,0:16:45.15:0,45,629	0/0:32,0:31:93.31:0,93,1298	0/0:30,0:30:90.30:0,90,1257	0/0:21,0:21:51.17:0,51,714	0/0:28,0:28:81.27:0,81,1134	0/0:46,0:46:99:0,126,1728	1/1:1,19:20:51.16:612,51,0	0/0:12,0:12:27.55:0,28,360	0/0:38,0:38:99:0,108,1510	0/0:18,0:18:54.18:0,54,756	0/0:23,0:23:66.22:0,66,924	0/0:24,0:24:69.17:0,69,923	0/0:20,0:20:54.18:0,54,756
chr10	85207714	.	AG	A	2284.95	PASS	AB=0.901;AC=30;AF=0.536;AN=56;BaseQRankSum=6.735;DP=445;FS=4.517;HRun=11;HaplotypeScore=63.9791;InbreedingCoeff=0.6071;MQ=69.54;MQ0=0;MQRankSum=-0.954;QD=8.19;ReadPosRankSum=4.549;VQSLOD=2.1848;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:15:14.97:0,15,81	1/1:0,4:4:8.99:74,9,0	0/1:12,0:11:6.60:7,0,102	0/0:11,0:8:11.61:0,12,99	0/1:17,2:20:10.35:10,0,294	0/0:15,0:15:20.96:0,21,198	1/1:4,0:15:20.36:59,20,0	0/0:18,0:18:30.05:0,30,304	1/1:0,18:18:53.94:443,54,0	1/1:2,7:10:17:129,17,0	1/1:4,17:21:38.87:313,39,0	1/1:2,0:21:28.51:84,29,0	1/1:0,0:14:24.44:72,24,0	1/1:3,0:18:28.52:84,29,0	1/1:4,9:13:29.91:241,30,0	1/1:3,13:17:18.51:279,19,0	1/1:5,26:31:71.91:591,72,0	0/0:24,0:24:55.73:0,56,299	0/0:11,0:11:21.04:0,21,217	0/0:12,0:12:18.05:0,18,192	0/1:11,1:12:0.64:1,0,178	1/1:1,0:10:18.33:54,18,0	0/1:12,2:14:13.25:13,0,270	0/0:17,0:17:30.06:0,30,306	0/1:16,3:19:13.59:14,0,280	0/0:17,0:17:27.04:0,27,272	0/0:25,1:26:48.08:0,48,485	0/1:7,2:10:28.40:28,0,121
chr10	85207884	.	G	GA	577.44	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.824;DP=624;FS=2.167;HRun=3;HaplotypeScore=61.2944;InbreedingCoeff=0.9953;MQ=86.26;MQ0=0;MQRankSum=-2.721;QD=32.08;ReadPosRankSum=-0.866;VQSLOD=3.4549;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.17:0,54,647	0/0:8,0:8:21.06:0,21,252	0/0:20,0:20:44.90:0,45,503	0/0:26,0:25:67.74:0,68,777	0/0:23,0:23:54.17:0,54,647	0/0:13,0:13:30.09:0,30,360	1/1:0,18:18:48.16:672,48,0	0/0:22,0:22:60.18:0,60,711	0/0:21,0:21:60.18:0,60,720	0/0:29,0:29:84.26:0,84,1008	0/0:20,0:20:51.16:0,51,612	0/0:23,0:23:60.18:0,60,720	0/0:18,0:18:51.16:0,51,611	0/0:22,0:22:66.20:0,66,792	0/0:18,0:18:42.13:0,42,504	0/0:20,0:20:57.17:0,57,682	0/0:36,0:36:99:0,99,1160	0/0:13,0:13:36.11:0,36,432	0/0:22,0:22:63.18:0,63,745	0/0:30,0:30:78.24:0,78,936	0/0:39,0:39:99:0,108,1283	0/0:19,0:19:45.13:0,45,529	0/0:18,0:18:51.11:0,51,596	0/0:32,0:32:90.26:0,90,1068	0/0:23,0:23:66.20:0,66,792	0/0:25,0:25:72.21:0,72,855	0/0:32,0:32:90.26:0,90,1068	0/0:16,0:16:48.15:0,48,576
chr10	85208266	.	CT	C	826.76	PASS	AC=10;AF=0.200;AN=50;BaseQRankSum=5.027;DP=401;FS=11.023;HRun=8;HaplotypeScore=50.2124;InbreedingCoeff=0.9042;MQ=34.18;MQ0=85;MQRankSum=-2.863;QD=16.54;ReadPosRankSum=2.866;VQSLOD=2.4278;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:25:30.09:0,30,358	0/0:10,0:7:9.03:0,9,109	./.	./.	0/0:18,0:18:24.07:0,24,286	0/0:17,0:14:20.80:0,21,229	1/1:2,4:4:9.01:87,9,0	0/0:16,0:14:20.09:0,20,223	0/0:12,0:8:18.06:0,18,217	0/0:27,0:22:36.07:0,36,418	0/0:20,0:18:33.56:0,34,367	1/1:2,10:11:32.27:297,32,0	1/1:1,7:7:15.02:145,15,0	1/1:1,9:8:18.03:174,18,0	0/0:12,0:10:15:0,15,165	0/0:5,0:6:16.41:0,16,79	0/0:25,0:17:23.26:0,23,222	0/0:24,0:18:24.08:0,24,216	0/0:18,0:15:30.05:0,30,346	0/0:11,0:9:9.03:0,9,109	0/0:7,0:3:6.02:0,6,72	1/1:1,13:13:30.05:289,30,0	0/0:6,0:5:12.04:0,12,145	./.	0/0:12,0:9:21.06:0,21,254	0/0:22,0:16:33.06:0,33,382	0/0:18,0:18:18.05:0,18,327	0/0:16,0:11:15.50:0,16,166
chr10	85209302	.	G	GA	1458.32	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.835;DP=545;FS=13.338;HRun=9;HaplotypeScore=53.5025;InbreedingCoeff=0.9818;MQ=76.61;MQ0=0;MQRankSum=-0.192;QD=25.58;ReadPosRankSum=1.648;VQSLOD=3.3681;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,36:39:99:1115,102,0	0/0:7,0:7:21:0,21,182	0/0:12,0:12:17.95:0,18,151	0/0:10,0:11:23.78:0,24,186	0/0:20,1:20:53.98:0,54,469	0/0:17,0:17:41.99:0,42,365	0/0:19,0:19:53.97:0,54,465	0/0:32,0:32:74.89:0,75,639	0/0:17,1:18:14.80:0,15,357	0/0:19,0:19:53.99:0,54,469	0/0:24,0:24:68.97:0,69,595	0/0:17,0:17:44.97:0,45,390	0/0:18,0:18:41.98:0,42,365	0/0:20,0:20:53.96:0,54,465	0/0:17,0:17:44.97:0,45,388	1/1:1,17:18:42.11:465,42,0	0/0:27,0:27:77.97:0,78,677	0/0:17,0:17:47.99:0,48,417	0/0:20,1:21:20.80:0,21,408	0/0:21,0:21:59.98:0,60,521	0/0:24,0:24:65.98:0,66,573	0/0:17,0:17:44.99:0,45,391	0/0:15,0:15:41.98:0,42,365	0/0:19,0:19:53.98:0,54,468	0/0:19,0:19:47.99:0,48,416	0/0:21,0:21:56.97:0,57,489	0/0:21,0:21:53.96:0,54,469	0/0:14,0:14:38.99:0,39,337
chr10	85209526	.	T	TG	2770.14	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.153;DP=592;FS=6.959;HRun=0;HaplotypeScore=54.6190;InbreedingCoeff=0.9993;MQ=75.71;MQ0=0;MQRankSum=-3.287;QD=34.63;ReadPosRankSum=1.510;VQSLOD=2.6480;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:35:93.24:1333,93,0	0/0:16,0:16:48.16:0,48,671	0/0:16,0:15:34.40:0,34,389	0/0:13,0:12:33.08:0,33,413	0/0:31,0:31:93.30:0,93,1282	0/0:14,0:14:42.14:0,42,585	1/1:2,28:30:69.23:1009,69,0	0/0:25,0:25:61.80:0,62,887	0/0:22,0:22:66.14:0,66,837	0/0:28,0:28:78.25:0,78,1071	0/0:18,0:18:54.17:0,54,731	0/0:22,0:22:66.20:0,66,878	0/0:13,0:13:36.10:0,36,470	0/0:18,0:18:54.17:0,54,739	0/0:17,0:17:51.16:0,51,697	1/1:2,13:15:39.12:571,39,0	0/0:26,0:26:78.25:0,78,1072	0/0:19,0:19:54.14:0,54,716	0/0:30,0:30:78.31:0,78,1021	0/0:22,0:22:63.19:0,63,850	0/0:17,0:17:51.15:0,51,681	0/0:28,0:28:84.26:0,84,1142	0/0:20,0:20:60.18:0,60,806	0/0:25,0:25:75.15:0,75,1007	0/0:12,0:12:36.11:0,36,473	0/0:26,0:26:78.25:0,78,1076	0/0:24,0:24:66.09:0,66,844	0/0:10,0:10:27.09:0,27,377
chr10	85210236	.	ATAAT	A	748.97	PASS	AB=0.514;AC=1;AF=0.018;AN=56;BaseQRankSum=5.238;DP=573;FS=0.999;HRun=0;HaplotypeScore=93.5653;InbreedingCoeff=-0.0186;MQ=77.11;MQ0=0;MQRankSum=-1.449;QD=41.61;ReadPosRankSum=0.436;VQSLOD=4.0084;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.29:0,84,2249	0/0:4,0:4:12.04:0,12,329	0/0:11,0:11:24.07:0,24,490	0/0:13,0:13:29.86:0,30,522	0/0:37,0:37:99:0,102,2720	0/0:15,0:15:45.15:0,45,1190	0/0:22,0:22:63.22:0,63,1680	0/0:31,0:31:93.32:0,93,2461	0/0:20,0:20:54.19:0,54,1442	0/0:24,0:24:72.25:0,72,1953	0/0:32,0:32:90.31:0,90,2388	0/0:14,0:14:42.14:0,42,1108	0/0:18,0:18:54.19:0,54,1438	0/0:11,0:11:33.11:0,33,904	0/0:17,0:17:51.16:0,51,1334	0/1:1,17:18:34.04:823,0,34	0/0:30,0:30:84.29:0,84,2263	0/0:18,0:18:48.16:0,48,1273	0/0:19,0:19:51.18:0,51,1387	0/0:35,0:35:99:0,102,2747	0/0:16,0:16:48.16:0,48,1315	0/0:19,0:19:54.18:0,54,1431	0/0:22,0:22:57.20:0,57,1558	0/0:12,0:12:36.12:0,36,948	0/0:23,0:23:66.23:0,66,1808	0/0:14,0:14:42.14:0,42,1149	0/0:32,0:32:96.33:0,96,2568	0/0:17,0:17:48.16:0,48,1314
chr10	85210354	.	T	TA	399.86	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.651;DP=548;FS=5.856;HRun=1;HaplotypeScore=50.7487;InbreedingCoeff=0.9924;MQ=63.53;MQ0=2;MQRankSum=1.149;QD=33.32;ReadPosRankSum=1.386;VQSLOD=3.1010;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.21:0,87,1066	0/0:13,0:13:39.13:0,39,506	0/0:21,0:12:33.11:0,33,429	0/0:22,0:13:39.12:0,39,499	0/0:26,0:26:75.24:0,75,970	0/0:20,0:20:54.15:0,54,683	0/0:25,0:25:72.23:0,72,934	0/0:35,0:35:96.31:0,96,1246	0/0:22,0:22:56.60:0,57,772	0/0:18,0:18:54.16:0,54,678	0/0:16,0:16:45.13:0,45,569	0/0:11,0:11:33.11:0,33,428	0/0:15,0:15:45.13:0,45,569	0/0:9,0:9:27:0,27,328	0/0:18,0:18:54.18:0,54,701	1/1:0,12:12:33.11:495,33,0	0/0:33,0:33:96.31:0,96,1245	0/0:25,0:25:75.19:0,75,939	0/0:24,0:24:72.21:0,72,908	0/0:19,0:19:51.09:0,51,614	0/0:29,0:29:87.28:0,87,1126	0/0:10,0:10:27.07:0,27,334	0/0:12,0:12:36.12:0,36,467	0/0:21,0:21:60.19:0,60,778	0/0:11,0:11:30.10:0,30,389	0/0:18,0:18:54.17:0,54,690	0/0:22,0:22:66.20:0,66,841	0/0:8,0:8:21.07:0,21,273
chr10	85211297	.	TG	T	644.81	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.718;DP=581;FS=0.809;HRun=3;HaplotypeScore=56.6280;InbreedingCoeff=0.9959;MQ=96.70;MQ0=0;MQRankSum=-2.023;QD=24.80;ReadPosRankSum=0.909;VQSLOD=2.9266;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:69.23:0,69,993	0/0:12,0:12:36.09:0,36,497	0/0:31,0:31:78.45:0,78,1181	0/0:30,0:29:69.23:0,69,990	0/0:27,0:27:81.27:0,81,1161	0/0:19,0:19:57.18:0,57,801	0/0:19,0:19:51.15:0,51,710	0/0:33,0:33:93.31:0,93,1324	0/0:16,0:16:42.14:0,42,605	0/0:16,0:16:48.16:0,48,691	0/0:15,0:15:42.14:0,42,595	0/0:14,0:14:39.09:0,39,538	0/0:10,0:10:27.09:0,27,388	0/0:15,0:15:45.13:0,45,628	0/0:18,0:18:54.15:0,54,750	0/0:21,0:20:63.21:0,63,906	0/0:21,0:21:63.21:0,63,907	1/1:3,23:26:23:738,23,0	0/0:22,0:22:66.21:0,66,932	0/0:27,0:27:78.26:0,78,1119	0/0:12,0:12:36.12:0,36,518	0/0:18,0:18:54.18:0,54,777	0/0:24,0:24:69.23:0,69,994	0/0:17,0:17:48.15:0,48,672	0/0:27,0:27:81.27:0,81,1166	0/0:25,0:25:75.24:0,75,1063	0/0:22,0:22:66.22:0,66,950	0/0:14,0:14:42.14:0,42,605
chr10	85211393	.	AGT	A	443.09	PASS	AB=0.894;AC=12;AF=0.222;AN=54;BaseQRankSum=2.255;DP=595;FS=11.333;HRun=0;HaplotypeScore=143.0972;InbreedingCoeff=0.0843;MQ=64.67;MQ0=6;MQRankSum=1.131;QD=2.31;ReadPosRankSum=0.108;VQSLOD=2.1576;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:34:6.88:0,7,53	0/1:10,4:14:74.29:74,0,248	0/0:27,0:20:6.02:0,6,87	0/0:28,0:19:6:0,6,68	0/0:24,1:26:15.03:0,15,185	0/1:14,2:16:0.74:1,0,376	1/1:13,7:22:20.72:197,21,0	0/0:25,0:25:11.72:0,12,392	0/0:12,0:18:8.63:0,9,78	0/0:30,2:32:11.15:0,11,506	0/0:20,0:20:22.31:0,22,363	./.	0/0:20,0:20:8.90:0,9,77	0/0:16,0:17:3:0,3,26	0/1:16,3:18:68.29:68,0,311	0/0:9,0:24:38.96:0,39,372	0/1:18,1:19:0.72:1,0,396	1/1:11,0:24:25.57:126,26,0	0/1:11,2:13:21.79:22,0,100	0/0:26,2:28:5.35:0,5,513	0/1:20,0:20:39.10:39,0,315	0/0:20,0:22:3:0,3,26	0/1:22,3:25:28.45:28,0,464	0/0:17,0:17:18.06:0,18,271	0/1:18,2:20:34.66:35,0,304	0/0:23,0:23:35.63:0,36,417	0/0:17,0:17:11.11:0,11,242	0/0:8,0:7:18.06:0,18,274
chr10	85212110	.	ATGTG	A	950.67	PASS	AB=0.907;AC=14;AF=0.269;AN=52;BaseQRankSum=0.983;DP=371;FS=0.864;HRun=0;HaplotypeScore=67.8361;InbreedingCoeff=0.4601;MQ=59.91;MQ0=10;MQRankSum=0.320;QD=8.97;ReadPosRankSum=1.742;VQSLOD=2.3312;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:17:18.01:0,18,332	1/1:3,2:5:3.01:47,3,0	./.	./.	0/0:18,0:17:22.30:0,22,393	0/0:6,0:17:21.02:0,21,364	0/0:7,0:8:8.75:0,9,88	0/0:28,0:28:13.46:0,13,138	0/0:5,0:5:6.02:0,6,111	1/1:4,3:7:11.93:158,12,0	1/1:4,2:6:9.03:141,9,0	0/0:1,0:3:3.48:0,3,53	0/1:4,0:4:0:0,0,0	0/0:7,0:7:3.01:0,3,66	1/1:3,4:8:9.02:122,9,0	0/1:6,1:11:29.08:29,0,261	1/1:13,15:27:36.12:544,36,0	0/1:13,0:19:24.06:44,0,24	0/0:18,0:21:22.31:0,22,374	0/0:10,0:10:12.04:0,12,196	0/0:8,0:14:6.02:0,6,123	0/0:6,0:5:3.01:0,3,57	0/0:7,0:7:9.03:0,9,193	0/0:10,0:10:18.06:0,18,404	0/1:16,1:17:23.33:23,0,410	0/0:16,0:26:42.25:0,42,418	0/0:20,0:20:20.10:0,20,326	0/0:9,0:13:8.95:0,9,156
chr10	85213135	.	C	CT	1242.26	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.014;DP=697;FS=0.664;HRun=3;HaplotypeScore=62.5869;InbreedingCoeff=0.9989;MQ=88.17;MQ0=0;MQRankSum=-2.336;QD=32.69;ReadPosRankSum=0.951;VQSLOD=3.8769;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,1402	0/0:13,0:13:39.12:0,39,468	0/0:28,0:28:72.15:0,72,826	0/0:22,0:22:60.15:0,60,701	0/0:24,0:24:72.22:0,72,862	0/0:18,0:18:54.15:0,54,636	0/0:33,0:33:99:0,99,1187	0/0:26,0:26:78.21:0,78,899	0/0:22,0:22:66.19:0,66,779	0/0:42,0:42:99:0,117,1404	0/0:20,0:20:60.18:0,60,720	0/0:25,0:25:69.21:0,69,828	0/0:25,0:25:72.21:0,72,849	0/0:30,0:30:81.25:0,81,971	0/0:27,0:27:78.24:0,78,935	1/1:0,27:27:72.24:1008,72,0	0/0:27,0:27:78.20:0,78,910	1/1:3,8:11:27.05:356,27,0	0/0:27,0:27:66.19:0,66,782	0/0:25,0:25:72.21:0,72,852	0/0:21,0:21:60.15:0,60,695	0/0:30,0:30:72.22:0,72,863	0/0:18,0:18:51.15:0,51,602	0/0:36,0:36:99:0,105,1231	0/0:22,0:22:63.19:0,63,756	0/0:23,0:23:66.19:0,66,780	0/0:24,0:22:72.21:0,72,853	0/0:10,0:10:27.08:0,27,324
chr10	85213624	.	A	AT	1356.14	PASS	AB=0.768;AC=24;AF=0.429;AN=56;BaseQRankSum=-1.476;DP=539;FS=1.021;HRun=14;HaplotypeScore=64.9545;InbreedingCoeff=0.2740;MQ=69.35;MQ0=2;MQRankSum=0.471;QD=4.24;ReadPosRankSum=0.584;VQSLOD=1.0455;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,5:28:41.29:248,41,0	0/1:1,2:3:13.27:20,0,13	0/0:22,1:15:9.68:0,10,58	0/1:6,0:4:8.19:8,0,12	0/1:25,1:31:10.76:11,0,258	0/0:18,1:21:22.98:0,23,267	1/1:6,0:9:8.52:43,9,0	0/0:29,0:31:15.39:0,15,198	0/1:9,7:16:7.31:60,0,7	1/1:10,10:20:1.52:114,2,0	0/1:8,3:12:23.70:52,0,24	1/1:7,18:25:4.79:165,5,0	0/1:9,12:23:18.49:119,0,18	1/1:5,12:17:14.99:128,15,0	0/1:12,15:27:1.71:205,0,2	1/1:7,8:17:11.52:75,12,0	1/1:8,15:24:1.11:160,1,0	0/0:8,0:10:11.40:0,11,32	0/0:22,0:24:43.80:0,44,276	0/0:21,0:24:36.38:0,36,222	0/1:9,3:12:2.74:3,0,108	0/1:7,9:16:1.27:114,0,1	0/0:21,1:23:18.05:0,18,258	0/0:14,0:16:19.34:0,19,169	0/0:18,1:21:6.79:0,7,155	0/1:29,2:34:6.87:7,0,302	0/0:14,0:16:19.57:0,20,121	0/0:10,0:10:23.65:0,24,154
chr10	85213755	.	A	AAGAGAGAGAGAGAGAGAGAG	237.32	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=3.307;DP=532;FS=1.380;HRun=0;HaplotypeScore=258.1921;InbreedingCoeff=0.2681;MQ=71.75;MQ0=4;MQRankSum=1.544;QD=3.44;ReadPosRankSum=-4.119;VQSLOD=2.0542;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.16:0,60,1969	0/0:5,0:5:8.18:0,8,197	0/0:38,0:24:26.89:0,27,557	0/1:40,0:25:44.36:44,0,278	0/0:14,0:14:42.14:0,42,1738	0/0:20,0:20:48.16:0,48,2233	0/0:3,0:11:18.03:0,18,517	0/0:34,0:35:57.19:0,57,1353	0/0:17,0:17:36.09:0,36,1472	0/0:19,0:19:57.19:0,57,2373	0/0:17,0:17:48.14:0,48,2081	0/0:21,0:21:39.13:0,39,1494	0/0:19,0:19:33.10:0,33,1262	0/0:13,0:13:24.08:0,24,743	0/0:20,0:20:41.70:0,42,1978	0/0:17,0:17:36.12:0,36,1691	0/0:22,0:22:54.17:0,54,2161	1/1:5,4:14:3.01:281,3,0	0/0:12,0:12:2.20:0,2,459	0/0:14,0:14:30.10:0,30,1063	0/0:38,0:38:84.19:0,84,3280	0/0:14,0:14:33.09:0,33,1281	0/0:17,0:17:48.15:0,48,1963	0/1:15,0:15:11.76:12,0,1349	0/0:10,0:10:27.09:0,27,1298	0/0:19,0:19:42.13:0,42,1772	0/0:14,0:14:36.04:0,36,1377	0/0:13,0:13:36.09:0,36,1261
chr10	85214553	.	TTG	T	562.41	PASS	AB=0.915;AC=22;AF=0.423;AN=52;BaseQRankSum=4.793;DP=560;FS=2.518;HRun=0;HaplotypeScore=78.6386;InbreedingCoeff=0.2645;MQ=59.15;MQ0=8;MQRankSum=2.247;QD=1.98;ReadPosRankSum=0.916;VQSLOD=1.6811;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:49:23.97:0,24,202	0/0:6,0:5:3.01:0,3,45	./.	./.	0/1:14,2:15:46.98:47,0,138	0/1:16,1:17:5.42:5,0,316	0/1:18,0:27:1.81:20,0,2	0/0:27,0:27:8.93:0,9,80	1/1:14,2:16:8.70:95,9,0	0/0:20,0:20:9.02:0,9,111	0/0:15,0:14:6.02:0,6,89	1/1:12,5:18:10.99:110,11,0	1/1:12,0:12:8.99:80,9,0	1/1:12,6:17:3:33,3,0	0/1:20,1:21:8.46:8,0,266	1/1:6,0:14:8.43:41,8,0	0/1:29,3:32:61.48:61,0,312	1/1:16,2:18:17.29:129,17,0	0/1:21,0:21:5.19:5,0,62	0/0:12,0:12:7.22:0,7,68	0/0:36,0:34:15.03:0,15,188	1/1:7,5:11:6.02:65,6,0	0/1:19,1:20:17.48:17,0,141	0/0:33,0:32:12.32:0,12,517	0/0:17,0:18:3.05:0,3,179	0/0:30,0:27:21.06:0,21,283	0/1:19,2:21:14.57:15,0,195	0/0:5,0:5:11.98:0,12,116
chr10	85214694	.	C	CCTG	844.54	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.229;DP=525;FS=1.024;HRun=0;HaplotypeScore=77.5926;InbreedingCoeff=0.9456;MQ=87.96;MQ0=4;MQRankSum=-4.143;QD=42.23;ReadPosRankSum=-2.227;VQSLOD=3.9251;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.25:0,72,1199	0/0:11,0:11:33.11:0,33,550	0/0:21,0:21:57.17:0,57,879	0/0:22,0:22:50.17:0,50,772	0/0:27,0:27:78.27:0,78,1295	0/0:26,0:26:66.23:0,66,1099	1/1:6,14:20:45.11:939,45,0	0/0:26,0:26:72.23:0,72,1152	0/0:12,0:12:18.06:0,18,300	0/0:22,0:22:66.23:0,66,1096	0/0:16,0:16:45.14:0,45,710	0/0:20,0:20:15.05:0,15,249	0/0:10,0:10:30.10:0,30,499	0/0:15,0:15:30.10:0,30,500	0/0:19,0:17:42.14:0,42,696	0/0:9,0:9:27.09:0,27,446	0/0:22,0:22:57.19:0,57,949	0/0:15,0:14:39.13:0,39,648	0/0:14,0:14:39.13:0,39,650	0/0:23,0:23:69.23:0,69,1126	0/0:25,0:25:63.20:0,63,1023	0/0:11,0:11:30.09:0,30,482	0/0:23,0:23:66.23:0,66,1099	0/0:23,0:23:69.24:0,69,1149	0/0:22,0:22:60.19:0,60,972	0/0:24,0:24:72.25:0,72,1199	0/0:14,0:14:36.12:0,36,600	0/0:4,0:4:12.04:0,12,196
chr10	85214727	.	CTCTT	C	2569.44	PASS	AB=1.000;AC=15;AF=0.300;AN=50;BaseQRankSum=2.013;DP=511;FS=10.258;HRun=0;HaplotypeScore=98.7016;InbreedingCoeff=0.8132;MQ=72.30;MQ0=6;MQRankSum=3.531;QD=14.94;ReadPosRankSum=2.113;VQSLOD=2.7937;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:34.35:557,34,0	0/0:9,0:9:9.03:0,9,158	./.	./.	0/0:25,0:25:36.08:0,36,711	0/0:5,0:15:30.10:0,30,506	1/1:7,1:14:21.03:214,21,0	0/1:24,0:23:13.99:14,0,16	0/0:11,0:11:6:0,6,73	0/0:21,0:25:27.02:0,27,479	0/0:9,0:18:20.97:0,21,289	0/0:20,0:20:12.04:0,12,202	0/0:8,0:12:15.05:0,15,252	0/0:12,0:12:6.02:0,6,101	0/0:10,0:18:21.07:0,21,395	0/0:5,0:12:12.04:0,12,223	0/0:14,0:19:6:0,6,90	0/0:15,0:16:27.05:0,27,391	1/1:6,1:7:9.01:100,9,0	1/1:13,12:25:24.08:374,24,0	1/1:10,8:18:12.04:187,12,0	0/0:10,0:10:20.99:0,21,283	0/0:25,0:25:48.14:0,48,1008	0/0:25,0:25:33.58:0,34,766	0/0:27,0:27:57.15:0,57,1130	1/1:16,19:34:34.16:794,34,0	1/1:9,12:21:33.11:514,33,0	./.
chr10	85214731	.	T	TTCTTTCTTTCTTTCTC	2924.32	PASS	AB=1.000;AC=18;AF=0.333;AN=54;BaseQRankSum=1.802;DP=492;FS=0.000;HRun=0;HaplotypeScore=208.6286;InbreedingCoeff=0.2917;MQ=69.13;MQ0=6;MQRankSum=-4.808;QD=14.84;ReadPosRankSum=-3.343;VQSLOD=2.0315;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:22.18:0,22,1351	0/1:8,0:8:53.94:87,0,54	0/0:20,0:16:7.70:0,8,68	0/1:11,0:9:5.54:6,0,26	0/0:23,0:23:51.10:0,51,1199	0/0:14,0:14:29.68:0,30,314	0/0:13,0:13:38.31:0,38,611	0/0:22,0:21:14.99:0,15,290	1/1:3,7:15:6.02:458,6,0	0/1:25,0:25:99:422,0,295	0/1:20,0:20:99:179,0,230	1/1:19,0:19:12.04:528,12,0	1/1:12,0:12:20.95:485,21,0	1/1:12,0:12:6.02:264,6,0	0/1:20,0:18:99:128,0,145	0/0:11,0:11:14.96:0,15,153	0/1:21,0:21:13.01:13,0,259	0/1:17,0:16:99:128,0,147	0/1:7,0:7:11.87:12,0,172	0/0:22,0:22:41.27:0,41,929	0/0:17,0:17:30.04:0,30,585	1/1:10,0:10:26.79:392,27,0	0/0:24,0:24:69.16:0,69,1920	0/0:23,0:23:40.33:0,40,1494	0/0:27,0:27:69.16:0,69,2032	0/0:30,0:29:23.91:0,24,1688	0/0:20,0:20:36.07:0,36,1115	./.
chr10	85214735	.	T	TTCTTTCTTTCTC	3706.62	PASS	AB=1.000;AC=17;AF=0.315;AN=54;BaseQRankSum=-1.169;DP=494;FS=0.000;HRun=0;HaplotypeScore=165.3659;InbreedingCoeff=0.3547;MQ=67.01;MQ0=7;MQRankSum=-4.939;QD=18.91;ReadPosRankSum=-0.157;VQSLOD=2.3659;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:47:0,47,1169	0/1:8,0:8:53.94:86,0,54	0/0:18,0:14:7.70:0,8,68	0/1:11,0:9:5.55:6,0,26	0/0:23,0:23:51.10:0,51,1079	0/0:15,0:15:27.43:0,27,131	0/0:13,0:13:37.75:0,38,583	0/0:22,0:21:24.04:0,24,383	1/1:13,0:13:6.02:317,6,0	0/1:23,0:23:99:429,0,353	0/1:21,0:21:99:212,0,245	1/1:1,19:23:12.04:717,12,0	1/1:11,1:12:20.95:626,21,0	1/1:2,11:17:6.02:359,6,0	0/1:20,0:18:99:229,0,147	0/0:10,0:10:13.97:0,14,74	0/1:21,0:21:10.01:10,0,282	0/1:17,0:16:99:213,0,145	0/0:8,0:7:15.03:0,15,201	0/0:21,0:21:47.96:0,48,853	0/0:16,0:16:30.04:0,30,509	1/1:10,0:10:26.79:504,27,0	0/0:23,0:23:69.15:0,69,1636	0/0:22,0:22:43.34:0,43,1309	0/0:26,0:26:72.17:0,72,1751	0/0:30,0:29:78.18:0,78,1643	0/0:21,0:21:39.08:0,39,996	./.
chr10	85214739	.	T	TTCTTTCTC	2970.21	PASS	AB=1.000;AC=18;AF=0.333;AN=54;BaseQRankSum=3.010;DP=485;FS=0.531;HRun=0;HaplotypeScore=123.5343;InbreedingCoeff=0.2671;MQ=60.46;MQ0=8;MQRankSum=-4.843;QD=14.85;ReadPosRankSum=3.226;VQSLOD=2.0954;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:47.01:0,47,841	0/1:7,0:7:73.93:106,0,74	0/0:14,0:10:7.70:0,8,68	0/1:8,0:6:9.35:9,0,24	0/0:18,0:18:51.10:0,51,927	0/1:15,0:15:29.24:77,0,29	0/0:14,0:14:41.95:0,42,547	0/0:24,0:23:51.01:0,51,483	1/1:13,0:13:6.02:212,6,0	0/1:24,0:24:99:220,0,353	0/1:21,0:21:99:104,0,267	1/1:22,0:22:12.04:432,12,0	1/1:12,0:12:20.95:421,21,0	1/1:16,0:16:6.02:216,6,0	0/1:20,0:18:99:372,0,165	0/1:11,0:11:23.60:24,0,43	0/0:22,0:22:5.17:0,5,311	0/1:20,0:19:99:211,0,167	0/0:10,0:8:18.03:0,18,201	0/0:20,0:20:48:0,48,668	0/0:16,0:16:33.04:0,33,430	1/1:0,11:11:26.84:745,27,0	0/0:24,0:24:69.16:0,69,1324	0/0:20,0:20:56.24:0,56,1076	0/0:26,0:26:72.15:0,72,1424	0/0:30,0:29:81.18:0,81,1271	0/0:18,0:18:39.09:0,39,721	./.
chr10	85214741	.	CTT	C	181.44	PASS	AB=0.938;AC=5;AF=0.089;AN=56;BaseQRankSum=8.586;DP=485;FS=3.945;HRun=3;HaplotypeScore=84.1929;InbreedingCoeff=-0.1124;MQ=60.31;MQ0=9;MQRankSum=1.704;QD=2.21;ReadPosRankSum=5.895;VQSLOD=-0.6428;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,12:27:99:243,0,183	0/0:7,0:7:21.06:0,21,307	0/1:15,0:10:14.60:15,0,143	0/1:8,0:6:14.42:14,0,74	0/0:17,0:17:51.17:0,51,908	0/0:14,0:14:36.12:0,36,516	0/1:14,0:14:11.35:11,0,264	0/0:24,0:23:66.19:0,66,907	0/0:12,0:12:6.02:0,6,69	0/0:24,0:24:69.22:0,69,1043	0/0:21,0:21:54.18:0,54,897	0/0:22,0:22:15.04:0,15,177	0/0:11,0:11:21.06:0,21,287	0/0:16,0:16:12.02:0,12,125	0/0:20,0:18:36.12:0,36,559	0/0:11,0:11:18.06:0,18,262	0/0:22,0:22:54.10:0,54,769	0/0:20,0:19:49.39:0,49,785	0/0:10,0:7:15.67:0,16,181	0/0:20,0:20:18.54:0,19,443	0/0:15,0:15:12.38:0,12,285	0/0:12,0:12:30.08:0,30,396	0/0:25,0:25:75.26:0,75,1325	0/0:20,0:20:57.67:0,58,982	0/0:27,0:27:81.22:0,81,1417	0/0:30,0:29:2.20:0,2,382	0/1:18,0:18:6.04:6,0,163	0/0:3,0:2:6.02:0,6,83
chr10	85215153	.	ATGTATGTG	A	1509.04	PASS	AB=0.935;AC=7;AF=0.125;AN=56;BaseQRankSum=10.266;DP=536;FS=37.965;HRun=0;HaplotypeScore=156.2396;InbreedingCoeff=-0.1300;MQ=52.17;MQ0=8;MQRankSum=-9.745;QD=11.43;ReadPosRankSum=2.907;VQSLOD=1.5388;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:33.04:0,33,812	0/0:4,0:4:11.85:0,12,84	0/1:15,0:2:0.58:1,0,21	0/0:21,0:7:11.08:0,11,111	0/0:27,0:27:66.02:0,66,1369	0/0:25,0:25:51.04:0,51,1157	0/0:14,0:14:35.98:0,36,666	0/0:26,0:26:59.55:0,60,838	0/1:20,0:20:69.86:270,0,70	0/0:25,0:24:63.14:0,63,1280	0/0:13,0:13:33.05:0,33,793	0/1:19,0:19:83.09:200,0,83	0/1:18,0:18:70.87:257,0,71	0/1:23,0:23:38.87:328,0,39	0/0:9,0:9:27.03:0,27,501	0/1:3,15:18:18.93:410,0,19	0/0:25,0:25:56.96:0,57,1034	0/0:20,0:19:53.61:0,54,736	0/0:18,0:18:44.51:0,45,458	0/0:17,0:17:39.54:0,40,962	0/0:29,0:29:59.48:0,59,1330	0/1:19,0:19:60.90:167,0,61	0/0:15,0:15:30.08:0,30,776	0/0:26,0:26:55.48:0,55,1128	0/0:12,0:12:26.87:0,27,726	0/0:27,0:27:77.90:0,78,1187	0/0:18,0:18:48.02:0,48,941	0/0:10,0:10:26.91:0,27,341
chr10	85215157	.	ATGTGTGTGTGTGTGTGTGTGTGTG	A	7485.55	PASS	AB=0.950;AC=11;AF=0.204;AN=54;BaseQRankSum=10.126;DP=566;FS=18.202;HRun=0;HaplotypeScore=290.2241;InbreedingCoeff=0.8517;MQ=50.26;MQ0=13;MQRankSum=-9.700;QD=63.44;ReadPosRankSum=3.473;VQSLOD=2.8763;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:33.11:0,33,2926	0/0:5,0:5:12.04:0,12,662	./.	0/0:19,0:5:5.05:0,5,41	0/0:22,0:27:48.16:0,48,3750	0/0:24,0:28:44.91:0,45,4036	0/0:14,0:17:30.56:0,31,2161	0/0:27,0:25:44.52:0,45,2607	1/1:5,13:19:24.08:1491,24,0	0/0:25,0:24:48.16:0,48,3655	0/0:14,0:14:33.11:0,33,2525	1/1:9,9:19:24.08:1342,24,0	1/1:6,12:18:24.08:1496,24,0	1/1:6,16:23:30.10:1752,30,0	0/0:9,0:10:30.09:0,30,1892	0/1:18,1:19:99:189,0,808	0/0:26,0:26:42.14:0,42,3173	0/0:17,0:19:42.12:0,42,2725	0/0:17,0:17:30.10:0,30,1375	0/0:16,0:18:39.13:0,39,3371	0/0:34,0:33:49.45:0,49,3894	1/1:4,15:20:27.09:1216,27,0	0/0:17,0:17:36.12:0,36,3136	0/0:26,0:25:48.16:0,48,3532	0/0:9,0:11:21.07:0,21,1949	0/0:27,0:28:48.16:0,48,3519	0/0:19,0:21:39.13:0,39,2929	0/0:12,0:13:33.11:0,33,2271
chr10	85216301	.	T	TC	11163.64	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=8.386;DP=756;FS=14.149;HRun=0;HaplotypeScore=89.9201;InbreedingCoeff=0.9953;MQ=85.11;MQ0=0;MQRankSum=-7.021;QD=44.48;ReadPosRankSum=4.494;VQSLOD=3.5285;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,57:57:99:2684,169,0	0/0:13,0:13:39.13:0,39,544	0/0:34,0:33:90.25:0,90,1163	0/0:29,0:28:52.37:0,52,809	0/0:36,0:36:99:0,102,1374	0/0:30,0:30:84.28:0,84,1166	1/1:0,29:29:75.26:1199,75,0	0/0:25,0:25:75.25:0,75,1043	1/1:0,25:26:69.23:1082,69,0	0/0:35,0:35:99:0,102,1396	0/0:22,0:22:63.17:0,63,811	1/1:0,27:27:75.26:1198,75,0	1/1:0,24:24:66.23:1053,66,0	1/1:0,21:21:60.20:959,60,0	0/0:21,0:21:63.21:0,63,875	1/1:0,23:23:60.20:958,60,0	0/0:28,0:27:81.25:0,81,1114	1/1:0,23:23:66.23:1055,66,0	0/0:24,0:24:69.21:0,69,928	0/0:30,0:30:84.27:0,84,1152	0/0:31,0:31:87.29:0,87,1213	1/1:0,21:21:63.13:975,63,0	0/0:33,0:33:99:0,99,1347	0/0:29,0:29:87.25:0,87,1188	0/0:24,0:24:72.23:0,72,992	0/0:19,1:20:12.23:0,12,743	0/0:30,0:30:90.30:0,90,1254	0/0:10,0:10:30.10:0,30,419
chr10	85216449	.	TA	T	2575.34	PASS	AB=0.891;AC=20;AF=0.357;AN=56;BaseQRankSum=11.880;DP=647;FS=0.000;HRun=13;HaplotypeScore=82.4087;InbreedingCoeff=0.6880;MQ=69.30;MQ0=1;MQRankSum=0.607;QD=9.50;ReadPosRankSum=2.202;VQSLOD=3.1660;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,26:35:79.86:575,80,0	0/0:6,0:6:14.99:0,15,137	0/1:18,2:20:46.42:46,0,114	0/0:15,0:13:11.19:0,11,114	0/0:28,0:32:83.55:0,84,742	0/0:27,1:30:30.50:0,30,551	1/1:7,17:24:58.17:400,58,0	0/0:30,0:30:55.92:0,56,499	0/0:34,1:35:53.10:0,53,647	0/0:18,0:18:17.12:0,17,316	0/0:12,0:15:7.86:0,8,211	1/1:11,12:23:50.47:356,50,0	1/1:7,19:27:49.61:349,50,0	1/1:2,11:13:29.82:219,30,0	0/0:21,3:24:28.77:0,29,409	1/1:5,19:24:28.60:344,29,0	0/0:30,0:31:66.11:0,66,577	1/1:0,16:16:35.63:263,36,0	0/0:20,0:21:44.90:0,45,418	0/0:29,0:31:67.95:0,68,618	0/1:19,2:20:6.49:6,0,322	1/1:2,9:12:28:193,28,0	0/1:26,4:31:21.76:22,0,420	0/0:20,0:23:50.28:0,50,412	0/0:14,3:18:10.98:0,11,255	0/1:20,3:23:7.87:8,0,223	0/0:36,0:36:77.82:0,78,706	0/0:10,0:10:30:0,30,282
chr10	85216998	.	TA	T	4038.40	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.810;DP=529;FS=1.665;HRun=7;HaplotypeScore=68.9474;InbreedingCoeff=0.9655;MQ=70.63;MQ0=0;MQRankSum=-0.533;QD=25.56;ReadPosRankSum=2.809;VQSLOD=4.4233;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:54.12:551,54,0	0/0:10,0:10:27.09:0,27,340	0/0:6,0:6:14.75:0,15,135	0/0:11,1:10:1.97:0,2,89	0/0:22,0:22:60.18:0,60,742	0/0:22,0:22:63.18:0,63,768	1/1:0,15:15:36.08:367,36,0	0/0:22,0:22:57.18:0,57,717	1/1:2,14:16:36.08:367,36,0	0/0:21,0:21:54.17:0,54,679	0/0:19,0:19:45.13:0,45,552	1/1:2,20:22:60.14:612,60,0	1/1:1,17:18:48.11:489,48,0	1/1:1,13:14:36.08:367,36,0	0/0:19,0:19:57.17:0,57,702	1/1:1,15:16:36.08:367,36,0	0/0:26,0:26:69.18:0,69,836	1/1:1,24:25:63.14:642,63,0	0/0:20,0:20:48.01:0,48,569	0/0:26,0:26:69.22:0,69,868	0/0:20,0:20:57.15:0,57,688	1/1:0,9:9:27.06:275,27,0	0/0:28,0:28:81.25:0,81,1006	0/0:26,0:26:78.24:0,78,969	0/0:21,0:21:60.19:0,60,755	0/0:12,0:12:30.09:0,30,366	0/0:22,0:22:57.16:0,57,691	0/0:16,0:16:45.14:0,45,566
chr10	85217555	.	A	AG	8516.33	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=17.384;DP=589;FS=12.566;HRun=0;HaplotypeScore=87.2421;InbreedingCoeff=0.9973;MQ=90.39;MQ0=0;MQRankSum=-10.021;QD=43.45;ReadPosRankSum=2.374;VQSLOD=4.2641;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,47:49:99:2010,126,0	0/0:6,0:6:18.06:0,18,252	0/0:30,0:30:78.70:0,79,1015	0/0:24,0:24:62.97:0,63,796	0/0:20,0:20:57.19:0,57,797	0/0:22,0:22:66.22:0,66,923	1/1:1,27:28:78.27:1237,78,0	0/0:24,0:24:72.22:0,72,977	1/1:0,19:19:54.18:862,54,0	0/0:24,0:24:72.24:0,72,1006	0/0:18,0:18:48.16:0,48,671	1/1:0,12:12:33.11:525,33,0	1/1:1,18:19:48.14:764,48,0	1/1:0,15:15:42.14:671,42,0	0/0:22,0:22:66.22:0,66,923	1/1:0,19:19:54.18:863,54,0	0/0:29,0:29:87.27:0,87,1198	1/1:1,20:21:60.20:962,60,0	0/0:16,0:16:45.13:0,45,610	0/0:25,0:25:75.24:0,75,1025	0/0:31,0:31:90.23:0,90,1200	1/1:0,14:14:39.13:623,39,0	0/0:11,0:11:30.10:0,30,420	0/0:20,0:20:60.18:0,60,820	0/0:18,0:18:54.16:0,54,734	0/0:33,0:33:96.32:0,96,1341	0/0:14,0:14:42.14:0,42,581	0/0:6,0:6:18.06:0,18,252
chr10	85217701	.	C	CT	5629.47	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=16.826;DP=561;FS=0.355;HRun=3;HaplotypeScore=86.1216;InbreedingCoeff=0.9983;MQ=86.37;MQ0=0;MQRankSum=-4.433;QD=32.92;ReadPosRankSum=1.615;VQSLOD=5.1864;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:60.20:804,60,0	0/0:9,0:9:27.07:0,27,312	0/0:25,0:26:59.29:0,59,667	0/0:21,0:20:17.35:0,17,341	0/0:28,0:28:78.24:0,78,931	0/0:24,0:24:66.19:0,66,780	1/1:2,19:21:42.10:540,42,0	0/0:23,0:23:57.13:0,57,630	1/1:2,22:24:63.17:827,63,0	0/0:23,0:23:66.15:0,66,748	0/0:18,0:18:48.14:0,48,562	1/1:0,13:13:36.12:482,36,0	1/1:1,16:17:48.16:646,48,0	1/1:0,17:17:51.17:688,51,0	0/0:19,0:19:54.12:0,54,613	1/1:1,14:15:36.05:462,36,0	0/0:14,0:14:42.11:0,42,489	1/1:0,20:20:45.08:578,45,0	0/0:19,0:18:51.09:0,51,560	0/0:23,0:23:69.15:0,69,788	0/0:17,0:17:51.14:0,51,598	1/1:2,15:17:45.15:602,45,0	0/0:18,0:18:45.14:0,45,539	0/0:33,0:33:93.20:0,93,1064	0/0:15,0:15:33.09:0,33,384	0/0:21,0:21:56.83:0,57,649	0/0:20,0:19:49.18:0,49,644	0/0:19,0:19:54.16:0,54,636
chr10	85217851	.	TGAAAA	T	7740.54	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.302;DP=434;FS=5.740;HRun=0;HaplotypeScore=91.5797;InbreedingCoeff=0.9944;MQ=76.45;MQ0=0;MQRankSum=-11.441;QD=62.42;ReadPosRankSum=3.047;VQSLOD=5.8469;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:66.23:1537,66,0	0/0:7,0:7:21.07:0,21,700	0/0:10,0:10:23.75:0,24,529	0/0:14,0:14:36.80:0,37,848	0/0:14,0:14:42.14:0,42,1392	0/0:22,0:22:66.23:0,66,2168	1/1:0,20:20:51.18:1177,51,0	0/0:27,0:27:81.28:0,81,2651	1/1:0,13:13:30.10:698,30,0	0/0:17,0:17:51.18:0,51,1654	0/0:19,0:19:57.20:0,57,1899	1/1:0,13:13:39.13:908,39,0	1/1:0,13:13:30.10:698,30,0	1/1:0,14:14:36.12:837,36,0	0/0:15,0:15:45.14:0,45,1398	1/1:0,7:7:18.06:419,18,0	0/0:20,0:20:60.21:0,60,1997	1/1:0,14:14:42.14:979,42,0	0/0:13,0:13:39.12:0,39,1230	0/0:15,0:15:42.14:0,42,1386	0/0:15,0:15:45.15:0,45,1446	1/1:0,7:7:21.07:488,21,0	0/0:15,0:15:45.15:0,45,1465	0/0:17,0:17:51.16:0,51,1584	0/0:15,0:15:45.15:0,45,1499	0/0:28,0:28:84.29:0,84,2784	0/0:22,0:22:66.23:0,66,2182	0/0:5,0:5:15.05:0,15,473
chr10	85219169	.	CAG	C	2098	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.226;DP=685;FS=4.019;HRun=0;HaplotypeScore=85.8955;InbreedingCoeff=0.9999;MQ=92.26;MQ0=0;MQRankSum=-4.716;QD=32.28;ReadPosRankSum=1.068;VQSLOD=5.7188;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:75.21:1023,75,0	0/0:13,0:13:39.13:0,39,702	0/0:28,0:28:78.23:0,78,1358	0/0:30,0:30:68.30:0,68,1189	0/0:40,0:40:99:0,105,1859	0/0:24,0:24:63.22:0,63,1119	1/1:3,18:21:51.17:714,51,0	0/0:36,0:36:96.30:0,96,1641	0/0:30,0:30:87.30:0,87,1548	0/0:30,0:30:87.29:0,87,1515	0/0:28,0:28:81.25:0,81,1398	0/0:22,0:22:60.19:0,60,1030	0/0:17,0:17:48.16:0,48,855	0/0:17,0:17:51.17:0,51,918	0/0:30,0:30:81.28:0,81,1458	0/0:19,0:19:51.13:0,51,831	0/0:22,0:22:60.18:0,60,1049	1/1:2,13:15:36.12:504,36,0	0/0:24,0:24:66.22:0,66,1159	0/0:28,0:28:78.22:0,78,1309	0/0:18,0:18:51.17:0,51,918	0/0:15,0:15:45.11:0,45,721	0/0:21,0:21:57.20:0,57,1026	0/0:26,0:26:75.26:0,75,1350	0/0:36,0:36:99:0,108,1926	0/0:22,0:22:63.17:0,63,1064	0/0:31,0:29:93.32:0,93,1658	0/0:13,0:13:39.13:0,39,702
chr10	85219398	.	A	AT	457.55	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.104;DP=533;FS=5.571;HRun=4;HaplotypeScore=86.0460;InbreedingCoeff=0.9567;MQ=83.66;MQ0=0;MQRankSum=-4.504;QD=32.68;ReadPosRankSum=2.000;VQSLOD=4.2649;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:66.15:0,66,735	0/0:9,0:9:27.08:0,27,306	0/0:18,0:18:47.13:0,47,491	0/0:22,0:22:59.84:0,60,653	0/0:29,0:29:87.23:0,87,977	0/0:25,0:25:72.19:0,72,807	0/0:11,0:11:33.09:0,33,374	0/0:29,0:29:75.20:0,75,843	0/0:22,0:22:54.15:0,54,608	0/0:24,0:24:72.18:0,72,805	0/0:24,0:24:69.20:0,69,782	0/0:8,0:8:18.05:0,18,200	0/0:16,0:16:42.12:0,42,473	0/0:6,0:6:12.03:0,12,136	0/0:14,0:13:39.11:0,39,442	1/1:0,14:14:42.10:552,42,0	0/0:13,0:13:39.11:0,39,441	0/0:11,0:11:21.06:0,21,238	0/0:23,0:23:69.20:0,69,783	0/0:23,0:23:69.20:0,69,783	0/0:21,0:21:60.17:0,60,680	0/0:16,0:16:42.12:0,42,476	0/0:16,0:16:45.13:0,45,510	0/0:27,0:27:81.22:0,81,908	0/0:19,0:19:51.14:0,51,579	0/0:26,0:26:75.21:0,75,850	0/0:27,0:27:78.21:0,78,874	0/0:9,0:9:27.08:0,27,306
chr10	85219420	.	TAGCTCTTG	T	5699.22	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.015;DP=501;FS=15.339;HRun=0;HaplotypeScore=137.4617;InbreedingCoeff=0.9779;MQ=93.87;MQ0=0;MQRankSum=-13.037;QD=49.99;ReadPosRankSum=1.256;VQSLOD=3.9697;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,17:23:42.14:1088,42,0	0/0:10,0:10:27.09:0,27,1152	0/0:25,0:24:60.92:0,61,2365	0/0:31,0:29:63.55:0,64,2317	0/0:23,0:23:63.22:0,63,2551	0/0:23,0:23:57.12:0,57,2047	1/1:7,4:11:15.05:307,15,0	0/0:28,0:28:66.23:0,66,2655	1/1:5,12:17:30.10:739,30,0	0/0:24,0:24:57.20:0,57,2343	0/0:21,0:21:57.18:0,57,2167	1/1:4,3:7:9.03:241,9,0	1/1:1,13:14:36.12:966,36,0	1/1:2,3:5:9.03:214,9,0	0/0:12,0:11:30.10:0,30,1285	1/1:3,10:13:30.10:805,30,0	0/0:11,0:11:30.06:0,30,1034	1/1:1,8:9:24.08:644,24,0	0/0:24,0:24:63.22:0,63,2399	0/0:22,0:22:60.21:0,60,2249	0/0:17,0:17:42.14:0,42,1488	1/1:5,10:15:27.09:695,27,0	0/0:14,0:14:30.10:0,30,1251	0/0:25,0:25:72.23:0,72,2698	0/0:19,0:19:48.16:0,48,1929	0/0:21,0:21:57.20:0,57,2315	0/0:28,0:28:78.27:0,78,3132	0/0:9,0:9:27.09:0,27,1024
chr10	85219447	.	GC	G	1521.82	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=10.337;DP=483;FS=1.660;HRun=1;HaplotypeScore=87.5155;InbreedingCoeff=0.9851;MQ=74.87;MQ0=3;MQRankSum=-11.902;QD=14.49;ReadPosRankSum=-0.394;VQSLOD=2.9419;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:25:59.14:382,59,0	0/0:21,0:21:31.78:0,32,421	0/0:33,0:15:28.01:0,28,274	0/0:32,0:18:40.39:0,40,308	0/0:23,0:24:46.30:0,46,418	0/0:19,0:19:50.93:0,51,457	1/1:3,1:6:8.66:76,9,0	0/0:24,2:26:49.04:0,49,517	1/1:11,1:12:35.46:234,35,0	0/0:18,0:18:41.09:0,41,377	0/0:17,1:18:43.51:0,44,377	1/1:9,1:10:20.65:133,21,0	1/1:14,0:14:35.41:224,35,0	1/1:6,1:7:14.74:91,15,0	0/0:12,0:11:29.90:0,30,246	1/1:9,0:10:29.58:194,30,0	0/0:12,0:12:23.95:0,24,226	1/1:10,0:10:26.70:181,27,0	0/0:19,1:20:33.79:0,34,324	0/0:11,0:11:32.89:0,33,296	0/0:14,0:14:24.43:0,24,226	1/1:7,2:11:32.41:221,32,0	0/0:19,0:19:37.65:0,38,294	0/0:17,0:17:32.90:0,33,288	0/0:16,0:16:30.34:0,30,333	0/0:24,0:24:41.62:0,42,382	0/0:28,0:26:59.12:0,59,502	0/0:14,0:14:26.46:0,26,199
chr10	85219841	.	CTTT	C	3211.48	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.803;DP=526;FS=5.735;HRun=8;HaplotypeScore=90.9191;InbreedingCoeff=0.9641;MQ=77.82;MQ0=0;MQRankSum=-1.418;QD=30.59;ReadPosRankSum=2.899;VQSLOD=2.3593;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:26:2.45:0,2,28	0/0:13,0:13:36.08:0,36,701	0/0:20,0:19:38.82:0,39,690	0/0:14,0:12:22.89:0,23,382	0/0:19,0:19:57.20:0,57,1236	0/0:21,0:21:60.21:0,60,1289	0/0:4,0:28:23.40:0,23,71	0/0:18,0:18:51.18:0,51,1104	1/1:0,11:11:30.10:441,30,0	0/0:20,0:20:54.19:0,54,1178	0/0:17,0:17:48.12:0,48,1001	1/1:0,18:18:45.15:664,45,0	1/1:2,8:10:27.09:398,27,0	1/1:2,14:16:39.13:574,39,0	0/0:18,0:18:48.16:0,48,1039	1/1:0,11:11:27.09:398,27,0	0/0:25,0:25:72.25:0,72,1543	1/1:2,1:21:56.79:581,57,0	0/0:20,0:20:48.14:0,48,1002	0/0:23,0:22:60.19:0,60,1252	0/0:24,0:24:69.22:0,69,1464	1/1:2,16:18:24.06:354,24,0	0/0:23,0:23:66.23:0,66,1400	0/0:25,0:25:66.23:0,66,1424	0/0:13,0:13:39.13:0,39,835	0/0:16,0:16:39.13:0,39,813	0/0:26,0:26:75.26:0,75,1566	0/0:11,0:11:26.98:0,27,516
chr10	85219970	.	TC	T	2621.02	PASS	AC=18;AF=0.346;AN=52;BaseQRankSum=7.395;DP=356;FS=1.056;HRun=2;HaplotypeScore=45.8746;InbreedingCoeff=0.9326;MQ=45.08;MQ0=18;MQRankSum=-4.886;QD=20.97;ReadPosRankSum=1.595;VQSLOD=3.5716;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,21:25:36.06:441,36,0	0/0:6,0:6:14.41:0,14,178	./.	./.	0/0:24,0:21:45.05:0,45,551	0/0:10,0:10:18.04:0,18,235	1/1:6,14:20:36.11:428,36,0	0/0:17,0:15:13.91:0,14,371	1/1:2,5:7:9.03:115,9,0	0/0:16,0:16:38.32:0,38,471	0/0:11,0:11:29.33:0,29,275	1/1:7,11:18:43.63:497,44,0	1/1:4,9:12:27.08:335,27,0	1/1:7,4:10:24.01:264,24,0	0/0:15,0:15:0.66:0,1,165	1/1:3,8:9:18.05:232,18,0	0/0:16,0:15:27.03:0,27,340	1/1:5,4:9:23.93:257,24,0	0/0:11,0:9:26.96:0,27,297	0/0:12,0:12:27.06:0,27,346	0/0:6,0:6:12.01:0,12,133	1/1:3,7:9:21.06:256,21,0	0/0:17,0:17:35.92:0,36,429	0/0:5,0:5:15.05:0,15,212	0/0:16,0:16:42:0,42,513	0/0:18,0:15:38.97:0,39,463	0/0:13,0:12:21.04:0,21,262	0/0:17,0:14:27.09:0,27,378
chr10	85220353	.	A	AT	2012.56	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.315;DP=625;FS=0.000;HRun=7;HaplotypeScore=75.0598;InbreedingCoeff=0.9772;MQ=83.26;MQ0=0;MQRankSum=-3.529;QD=26.14;ReadPosRankSum=0.067;VQSLOD=4.0679;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,29:32:73.46:968,73,0	0/0:9,0:9:27.04:0,27,261	0/0:21,0:21:52.45:0,52,451	0/0:19,0:18:19.83:0,20,270	0/0:19,0:19:54.08:0,54,521	0/0:17,0:17:48.07:0,48,464	1/1:4,18:22:45.14:544,45,0	0/0:29,0:29:66.10:0,66,637	0/0:27,0:27:75.11:0,75,724	0/0:30,0:30:81.12:0,81,782	0/0:21,0:21:57.09:0,57,550	0/0:20,0:20:60.10:0,60,579	0/0:23,0:23:66.11:0,66,637	0/0:25,0:25:69.11:0,69,666	0/0:24,0:24:66.10:0,66,637	0/0:15,0:15:45.07:0,45,435	0/0:33,0:33:84.12:0,84,806	1/1:3,20:23:54.16:644,54,0	0/0:19,0:19:39.04:0,39,372	0/0:31,0:31:84.13:0,84,811	0/0:17,0:17:39.06:0,39,377	0/0:24,0:24:66.09:0,66,631	0/0:23,0:23:63.10:0,63,608	0/0:16,0:16:48.08:0,48,463	0/0:24,0:24:63.08:0,63,604	0/0:32,0:32:96.15:0,96,927	0/0:25,0:25:72.12:0,72,695	0/0:5,0:5:9.01:0,9,87
chr10	85220504	.	T	TA	1049.98	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.532;DP=679;FS=3.424;HRun=5;HaplotypeScore=71.6188;InbreedingCoeff=0.9448;MQ=81.84;MQ0=0;MQRankSum=-3.620;QD=30.88;ReadPosRankSum=2.231;VQSLOD=4.5107;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:93.23:0,93,999	0/0:12,0:12:36.08:0,36,379	0/0:13,0:13:33.01:0,33,326	0/0:24,0:23:56.28:0,56,627	0/0:25,0:25:69.17:0,69,741	0/0:19,0:19:51.13:0,51,547	0/0:24,0:24:63.13:0,63,667	0/0:34,0:34:90.20:0,90,948	0/0:21,0:21:57.13:0,57,605	0/0:24,0:24:66.16:0,66,703	0/0:21,0:21:45.10:0,45,478	0/0:30,0:30:84.17:0,84,881	0/0:29,0:29:78.18:0,78,829	0/0:31,0:31:81.14:0,81,843	0/0:26,0:26:75.14:0,75,782	0/0:21,0:21:57.13:0,57,604	0/0:31,0:31:87.18:0,87,916	1/1:3,31:34:87.28:1145,87,0	0/0:29,0:29:75.15:0,75,793	0/0:18,0:18:48.12:0,48,515	0/0:37,0:37:93.16:0,93,966	0/0:24,0:24:63.14:0,63,669	0/0:18,0:18:48.11:0,48,509	0/0:27,0:27:69.15:0,69,726	0/0:19,0:19:54.11:0,54,564	0/0:25,0:25:69.15:0,69,724	0/0:25,0:25:72.18:0,72,773	0/0:3,0:3:9.02:0,9,97
chr10	85220932	.	TAAAAAAA	T	6821.63	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.289;DP=577;FS=1.739;HRun=16;HaplotypeScore=143.2226;InbreedingCoeff=0.9677;MQ=71.90;MQ0=6;MQRankSum=-15.540;QD=39.20;ReadPosRankSum=6.966;VQSLOD=2.7951;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:30:53.90:681,54,0	0/0:5,0:5:9.03:0,9,276	0/0:38,0:18:23.84:0,24,364	0/0:26,0:17:25.34:0,25,449	0/0:15,0:21:51.16:0,51,1565	0/0:14,0:15:36.10:0,36,1027	1/1:3,0:19:29.99:393,30,0	0/0:19,0:21:51.09:0,51,1361	1/1:0,25:25:66.22:1297,66,0	0/0:21,0:23:51.11:0,51,1160	0/0:17,0:19:36.11:0,36,1129	1/1:0,21:21:48.12:978,48,0	1/1:0,17:17:42.14:858,42,0	1/1:2,16:18:39.57:793,40,0	0/0:21,0:24:51.16:0,51,1646	1/1:0,14:14:39.13:795,39,0	0/0:33,0:40:99:0,102,3235	1/1:2,0:10:4.37:193,4,0	0/0:12,0:15:36.10:0,36,926	0/0:15,0:17:51.17:0,51,1547	0/0:8,0:11:24.03:0,24,563	1/1:4,16:20:45.07:833,45,0	0/0:18,0:21:51.16:0,51,1436	0/0:17,0:18:42.14:0,42,1258	0/0:16,0:18:45.15:0,45,1453	0/0:30,0:31:72.21:0,72,1889	0/0:23,0:26:66.22:0,66,2059	0/0:11,0:11:33.11:0,33,1019
chr10	85222745	.	AACAC	A	305.90	PASS	AB=0.901;AC=8;AF=0.154;AN=52;BaseQRankSum=2.674;DP=572;FS=0.000;HRun=0;HaplotypeScore=97.7138;InbreedingCoeff=0.0891;MQ=67.50;MQ0=8;MQRankSum=-1.254;QD=2.01;ReadPosRankSum=0.315;VQSLOD=1.7261;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:45:48.16:0,48,935	0/0:6,0:6:15.05:0,15,346	./.	./.	0/0:11,0:10:9.03:0,9,136	0/0:15,0:18:23.55:0,24,420	0/0:22,0:21:26.73:0,27,487	0/0:20,0:20:11.85:0,12,140	0/0:9,0:14:8.98:0,9,123	0/0:17,0:17:18.05:0,18,360	0/1:13,1:14:25.72:26,0,304	0/0:9,0:15:9.03:0,9,157	0/0:9,0:14:6:0,6,59	0/0:20,0:19:18.06:0,18,373	0/1:23,1:26:10.58:11,0,709	1/1:7,9:18:21.06:289,21,0	0/1:22,3:23:7.90:8,0,649	0/0:15,0:21:20.20:0,20,331	0/0:25,0:24:18.06:0,18,388	0/1:22,0:23:9.84:10,0,330	0/1:20,1:28:39:76,0,39	0/0:15,0:24:14.51:0,15,155	0/1:15,2:17:19.81:20,0,411	0/0:26,0:26:30.04:0,30,554	0/0:16,0:16:33.28:0,33,585	0/0:16,0:16:24.07:0,24,487	0/0:17,0:17:28.32:0,28,517	0/0:11,0:11:22.77:0,23,484
chr10	85222763	.	C	CACAC	610.75	PASS	AB=1.000;AC=16;AF=0.296;AN=54;BaseQRankSum=-1.761;DP=648;FS=0.885;HRun=0;HaplotypeScore=113.9225;InbreedingCoeff=0.4706;MQ=54.25;MQ0=20;MQRankSum=-2.382;QD=2.54;ReadPosRankSum=-2.211;VQSLOD=1.9405;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:44:9.47:135,0,9	0/0:7,0:7:12.01:0,12,143	1/1:25,0:12:0.47:1,0,0	./.	0/0:15,0:13:0.47:0,0,1	0/0:21,0:21:5.62:0,6,181	0/0:21,0:20:17.99:0,18,234	0/1:26,0:25:1.64:2,0,19	1/1:14,0:14:8.39:111,8,0	0/0:22,0:22:5.90:0,6,75	0/0:17,0:17:11.38:0,11,108	1/1:15,0:15:9.03:211,9,0	1/1:18,0:17:3.90:63,4,0	1/1:15,4:19:15.75:155,16,0	0/0:30,0:30:17.63:0,18,339	0/0:19,0:18:21.02:0,21,194	0/0:25,0:23:30.02:0,30,423	0/1:26,0:26:6.58:7,0,59	0/0:26,0:24:5.05:0,5,71	0/0:21,0:21:15.76:0,16,183	0/0:48,0:46:15.48:0,15,139	1/1:23,0:22:3.01:71,3,0	0/0:18,0:17:14.99:0,15,147	0/0:28,0:28:20.84:0,21,255	0/0:19,0:19:11.51:0,12,136	0/0:21,0:21:8.06:0,8,118	0/1:29,0:29:8.30:8,0,127	0/0:12,0:12:15.48:0,15,186
chr10	85225501	.	CCTCTCTCT	C	675.02	PASS	AB=0.927;AC=18;AF=0.346;AN=52;BaseQRankSum=5.989;DP=341;FS=9.105;HRun=0;HaplotypeScore=79.7993;InbreedingCoeff=0.3734;MQ=50.03;MQ0=20;MQRankSum=-5.429;QD=5.58;ReadPosRankSum=3.219;VQSLOD=0.6785;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,10:19:3.01:75,3,0	0/0:4,0:3:3.01:0,3,77	0/0:12,0:3:0:0,0,0	./.	0/0:19,0:18:9.03:0,9,228	0/0:12,0:10:3.01:0,3,72	0/0:18,0:19:24.90:0,25,303	0/0:8,0:8:0:0,0,0	1/1:9,0:8:12.04:223,12,0	0/0:17,0:17:21.48:0,21,506	0/0:18,0:17:9.03:0,9,193	1/1:8,0:6:6.02:109,6,0	1/1:10,0:10:6.02:112,6,0	1/1:9,0:9:6.02:104,6,0	0/0:17,0:17:12.04:0,12,437	0/0:5,0:8:2.99:0,3,24	0/0:18,0:16:29.28:0,29,636	0/1:10,0:9:19.94:20,0,24	0/0:6,0:5:0.47:0,0,2	0/1:9,0:10:9.90:10,0,14	0/0:15,0:14:2.96:0,3,19	1/1:9,0:8:6.02:93,6,0	0/0:16,0:16:12.04:0,12,291	0/1:9,0:10:3.06:3,0,296	0/0:8,0:8:3.01:0,3,66	0/1:14,0:14:3.66:4,0,71	1/1:7,4:11:3.01:72,3,0	./.
chr10	85225510	.	CTCTCTCTCTCTCTCT	C	1176.31	PASS	AB=0.786;AC=5;AF=0.089;AN=56;BaseQRankSum=7.132;DP=379;FS=16.919;HRun=0;HaplotypeScore=126.6050;InbreedingCoeff=0.1807;MQ=46.73;MQ0=27;MQRankSum=-4.191;QD=27.36;ReadPosRankSum=1.506;VQSLOD=1.3742;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:33.10:0,33,579	0/0:4,0:3:9.03:0,9,335	0/0:9,0:1:0.47:0,0,1	0/0:17,0:2:3.01:0,3,38	0/0:20,0:19:25.51:0,26,744	0/0:13,0:11:18.06:0,18,489	0/0:21,0:21:52.71:0,53,1767	0/0:10,0:10:27:0,27,578	0/1:6,3:9:4.11:434,0,4	0/0:20,0:20:57.19:0,57,2057	0/0:20,0:19:32.69:0,33,932	0/1:5,2:5:31.22:200,0,31	0/1:6,2:7:64.20:219,0,64	0/1:7,2:9:33.21:236,0,33	0/0:16,0:16:29.93:0,30,1315	0/0:14,0:13:30.01:0,30,706	0/0:16,0:14:36.12:0,36,1699	0/0:13,0:13:35.34:0,35,737	0/0:8,0:7:21.07:0,21,522	0/0:15,0:15:30.03:0,30,740	0/0:20,0:19:38.94:0,39,858	0/1:7,2:8:0.73:203,0,1	0/0:21,0:21:42.12:0,42,1590	0/0:15,0:15:17.26:0,17,975	0/0:5,0:5:15.05:0,15,319	0/0:18,0:16:48.16:0,48,1194	0/0:12,0:11:23.33:0,23,419	0/0:5,0:5:12.04:0,12,345
chr10	85226552	.	A	ATGTGTG	1579.27	PASS	AB=0.813;AC=10;AF=0.179;AN=56;BaseQRankSum=0.591;DP=659;FS=14.584;HRun=0;HaplotypeScore=144.6278;InbreedingCoeff=0.5548;MQ=59.14;MQ0=9;MQRankSum=-3.543;QD=10.06;ReadPosRankSum=-2.432;VQSLOD=1.6909;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:41:60.01:0,60,1077	0/0:8,0:9:23.95:0,24,414	0/0:19,0:8:2.95:0,3,19	0/1:29,0:16:4.54:5,0,163	0/0:23,0:26:24.39:0,24,687	0/0:15,0:20:38.41:0,38,706	0/0:16,0:16:33.07:0,33,576	0/0:33,0:34:26.34:0,26,521	1/1:9,12:21:18.06:590,18,0	0/0:29,0:31:54.13:0,54,894	0/0:28,0:28:49.32:0,49,830	1/1:8,12:21:24.08:664,24,0	1/1:8,9:21:18:414,18,0	0/0:3,11:16:0.47:0,0,1	0/0:22,0:22:48.11:0,48,882	0/0:5,0:25:14.26:0,14,83	0/0:27,0:28:51.52:0,52,998	0/1:14,0:30:45.80:46,0,131	0/1:11,0:10:8.86:9,0,182	0/0:29,0:29:33.10:0,33,622	0/0:24,0:23:37.22:0,37,680	0/1:7,13:21:0:0,0,0	0/0:28,0:29:67.02:0,67,1247	0/0:20,0:20:26.92:0,27,759	0/0:20,0:23:57.17:0,57,1049	0/0:19,0:21:3.90:0,4,273	0/0:22,0:23:39.02:0,39,733	0/0:14,0:14:30.07:0,30,489
chr10	85226894	.	ATCTATATCTATG	A	750.76	PASS	AB=1.000;AC=10;AF=0.192;AN=52;BaseQRankSum=0.672;DP=586;FS=13.461;HRun=0;HaplotypeScore=184.0594;InbreedingCoeff=0.4195;MQ=57.04;MQ0=17;MQRankSum=1.159;QD=6.59;ReadPosRankSum=-3.295;VQSLOD=1.2800;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:29.91:324,30,0	0/0:15,0:15:42.06:0,42,1055	0/0:10,0:3:2.99:0,3,24	./.	0/0:28,0:28:78.12:0,78,2550	0/0:16,0:16:42.12:0,42,1761	1/1:10,0:10:6.46:172,6,0	0/0:42,0:40:96.10:0,96,1188	0/1:12,0:12:95.43:95,0,429	0/0:23,0:23:57.16:0,57,2139	0/0:27,0:27:75.16:0,75,2470	0/1:13,0:13:19.90:20,0,909	0/1:13,0:13:35.91:36,0,984	0/1:18,0:18:34.99:35,0,682	0/0:21,0:21:57.10:0,57,2033	0/0:18,0:18:48.11:0,48,1685	0/0:36,0:36:90.07:0,90,3223	1/1:2,18:20:6.91:217,7,0	0/0:30,0:22:45.01:0,45,1327	0/0:31,0:31:78.14:0,78,2547	0/0:16,0:16:39.04:0,39,1118	./.	0/0:18,0:18:42.08:0,42,1399	0/0:12,0:12:27.04:0,27,862	0/0:32,0:32:87.17:0,87,2797	0/0:31,0:30:75.20:0,75,2821	0/0:35,0:34:93.12:0,93,3477	0/0:22,0:22:63.12:0,63,2267
chr10	85227583	.	T	TC	5290.34	PASS	AB=0.923;AC=19;AF=0.339;AN=56;BaseQRankSum=-1.029;DP=464;FS=8.839;HRun=3;HaplotypeScore=55.8120;InbreedingCoeff=0.9439;MQ=55.86;MQ0=8;MQRankSum=-5.449;QD=31.49;ReadPosRankSum=1.177;VQSLOD=4.5455;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,23:29:63.14:835,63,0	0/0:9,0:9:24.05:0,24,274	0/0:9,1:7:12.04:0,12,140	0/1:10,1:5:1.23:1,0,46	0/0:25,0:25:63.15:0,63,719	0/0:18,0:18:42.13:0,42,503	1/1:1,18:19:48.16:671,48,0	0/0:19,0:18:48.12:0,48,546	1/1:2,17:19:45.15:630,45,0	0/0:13,0:13:33.09:0,33,396	0/0:11,0:11:30.09:0,30,359	1/1:2,15:17:48.12:643,48,0	1/1:0,11:11:27.09:376,27,0	1/1:2,11:13:33.11:461,33,0	0/0:12,0:11:33.10:0,33,396	1/1:0,14:14:36.12:498,36,0	0/0:25,1:26:33.76:0,34,811	1/1:1,17:18:51.17:713,51,0	0/0:19,0:16:45.12:0,45,527	0/0:19,0:19:54.15:0,54,635	0/0:18,0:16:36.11:0,36,432	1/1:1,15:16:33.11:462,33,0	0/0:16,0:16:45.10:0,45,522	0/0:15,0:15:42.01:0,42,504	0/0:20,0:20:57.17:0,57,682	0/0:23,0:23:63.19:0,63,756	0/0:13,0:13:33.10:0,33,396	0/0:10,0:10:12:0,12,129
chr10	85227594	.	GA	G	497.28	PASS	AB=0.837;AC=9;AF=0.161;AN=56;BaseQRankSum=5.664;DP=469;FS=19.936;HRun=12;HaplotypeScore=65.9651;InbreedingCoeff=0.2754;MQ=58.02;MQ0=6;MQRankSum=-4.115;QD=3.80;ReadPosRankSum=1.004;VQSLOD=-0.1356;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,23:29:34.88:271,35,0	0/0:10,1:11:6.79:0,7,242	0/0:6,0:5:2.13:0,2,24	0/1:7,3:6:11.84:38,0,12	0/0:22,1:24:4.50:0,4,394	0/0:14,0:17:22.30:0,22,265	1/1:9,10:19:35.78:269,36,0	0/0:16,1:17:12.48:0,12,295	0/0:19,0:19:29.54:0,30,257	0/0:10,0:10:24.03:0,24,244	0/0:13,0:13:33.03:0,33,317	0/0:15,1:18:24.55:0,25,401	0/0:10,0:10:21.04:0,21,213	0/0:12,1:14:9.72:0,10,253	0/0:16,0:15:42.06:0,42,414	0/0:15,0:15:33.06:0,33,330	0/1:22,3:26:0.63:1,0,521	0/0:7,0:23:40.51:0,41,238	0/1:13,3:14:16.29:16,0,199	0/0:14,1:17:1.07:0,1,237	0/0:19,0:17:42.04:0,42,403	0/0:18,1:20:9.83:0,10,270	0/0:11,0:13:8.38:0,8,190	0/0:19,0:19:51.08:0,51,506	0/0:20,1:21:24.86:0,25,434	0/1:18,4:24:36.19:36,0,353	0/0:13,1:14:12.82:0,13,305	0/1:5,1:6:8.24:8,0,97
chr10	85228025	.	ATGG	A	651.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.920;DP=692;FS=3.183;HRun=0;HaplotypeScore=99.3383;InbreedingCoeff=0.9715;MQ=77.20;MQ0=0;MQRankSum=-0.744;QD=26.08;ReadPosRankSum=0.640;VQSLOD=3.8530;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:54.17:0,54,1073	0/0:14,0:14:27.09:0,27,538	0/0:30,0:29:22.33:0,22,609	0/0:23,0:23:46.71:0,47,878	0/0:37,0:37:60.20:0,60,1178	0/0:14,0:14:36.12:0,36,721	0/0:30,0:30:72.25:0,72,1439	0/0:34,0:34:57.14:0,57,1055	0/0:17,0:17:48.16:0,48,986	0/0:33,0:33:69.23:0,69,1334	0/0:15,0:15:33.11:0,33,666	0/0:17,0:17:39.13:0,39,801	0/0:17,0:17:45.15:0,45,925	0/0:25,0:25:66.20:0,66,1303	0/0:26,0:26:63.22:0,63,1278	0/0:21,0:21:54.19:0,54,1111	0/0:34,0:33:93.28:0,93,1874	1/1:2,23:25:51.17:747,51,0	0/0:20,0:20:26.95:0,27,353	0/0:29,0:29:50.91:0,51,984	0/0:28,0:28:51.93:0,52,1096	0/0:22,0:22:48.16:0,48,984	0/0:26,0:26:52.94:0,53,1012	0/0:28,0:28:69.24:0,69,1394	0/0:33,0:33:60.21:0,60,1221	0/0:30,0:30:45.15:0,45,898	0/0:21,3:24:14.05:0,14,1020	0/0:8,0:8:21.07:0,21,418
chr10	85228790	.	GGTGTGTGTGTGTGTGTGT	G	2084.24	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.273;DP=598;FS=27.252;HRun=0;HaplotypeScore=255.9594;InbreedingCoeff=0.8348;MQ=66.87;MQ0=12;MQRankSum=-4.212;QD=24.52;ReadPosRankSum=-0.419;VQSLOD=1.1817;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:19.55:0,20,1300	1/1:1,2:3:3.01:146,3,0	0/0:27,0:20:9.03:0,9,126	0/0:37,0:24:12.04:0,12,247	0/0:17,0:17:18.06:0,18,1012	0/0:21,0:21:24.55:0,25,1553	0/0:23,0:28:29.09:0,29,1762	0/0:26,0:25:38.71:0,39,1518	0/0:17,0:18:42.14:0,42,2672	1/1:19,9:29:24.06:733,24,0	1/1:8,4:12:6.02:276,6,0	0/0:15,0:15:30.10:0,30,1739	0/0:16,0:17:27.09:0,27,1711	0/0:16,0:16:21.07:0,21,1531	1/1:9,9:18:12.04:558,12,0	0/0:17,0:17:22.22:0,22,1388	1/1:15,6:22:14.99:528,15,0	0/0:36,0:38:72.20:0,72,4489	0/0:25,0:25:29.13:0,29,1304	0/0:8,0:7:6.02:0,6,296	0/0:37,0:35:26.37:0,26,1820	0/0:20,0:23:36.12:0,36,2391	0/0:8,0:8:12.04:0,12,669	0/0:25,0:31:51.18:0,51,3648	0/0:11,0:9:12.04:0,12,615	0/0:19,0:19:29.69:0,30,1457	0/0:26,0:25:27.06:0,27,1239	0/0:8,0:8:6.02:0,6,453
chr10	85229133	.	T	TCACA	769.11	PASS	AB=1.000;AC=21;AF=0.500;AN=42;BaseQRankSum=1.947;DP=441;FS=0.944;HRun=0;HaplotypeScore=78.4070;InbreedingCoeff=0.4730;MQ=76.30;MQ0=9;MQRankSum=-2.724;QD=3.73;ReadPosRankSum=-0.394;VQSLOD=1.5813;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:35:20.94:21,0,22	0/0:6,0:6:5.93:0,6,40	./.	./.	0/0:10,0:10:2.97:0,3,20	0/0:10,0:13:8.98:0,9,94	0/0:22,0:22:14.94:0,15,197	./.	1/1:14,0:14:4.48:27,4,0	./.	0/0:11,0:11:3.01:0,3,46	1/1:9,3:15:6.02:140,6,0	./.	1/1:8,5:15:7.27:142,7,0	0/1:14,0:14:0.31:0,0,126	0/0:7,0:12:11.99:0,12,105	0/0:29,0:29:30.08:0,30,435	1/1:15,8:26:15.94:310,16,0	1/1:18,0:16:5.05:50,5,0	0/0:12,0:11:2.32:0,2,45	1/1:15,0:16:2.74:12,3,0	1/1:6,0:9:3.01:70,3,0	./.	0/0:11,0:17:30.54:0,31,370	./.	0/1:18,0:18:5.15:5,0,81	1/1:11,3:20:8.35:92,8,0	1/1:3,0:4:8.48:48,8,0
chr10	85229303	.	A	AT	4640.38	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=5.216;DP=569;FS=6.015;HRun=6;HaplotypeScore=63.1824;InbreedingCoeff=0.9954;MQ=81.84;MQ0=1;MQRankSum=-1.059;QD=29.37;ReadPosRankSum=2.642;VQSLOD=5.6700;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:57.13:698,57,0	0/0:14,0:14:42.03:0,42,405	0/0:31,0:30:54.61:0,55,538	0/0:18,0:17:33.07:0,33,334	0/0:34,0:34:93.16:0,93,932	0/0:17,1:18:13.38:0,13,446	1/1:3,19:22:51.16:641,51,0	0/0:28,0:28:63.10:0,63,625	1/1:0,12:12:33.11:415,33,0	0/0:13,0:13:33.07:0,33,337	0/0:17,0:17:45.08:0,45,452	1/1:4,10:14:24.08:302,24,0	1/1:2,11:13:27.09:339,27,0	1/1:2,13:15:33.11:415,33,0	0/0:19,0:19:51.11:0,51,518	1/1:4,15:19:42.13:528,42,0	0/0:25,0:25:75.15:0,75,757	1/1:0,22:22:54.17:679,54,0	0/0:22,0:22:41.13:0,41,519	0/0:27,0:27:69.12:0,69,689	0/0:23,0:23:66.02:0,66,646	1/1:0,20:20:51.12:624,51,0	0/0:17,0:17:45.07:0,45,450	0/0:11,0:11:26.87:0,27,251	0/0:29,0:29:87.17:0,87,870	0/0:24,0:24:66.15:0,66,673	0/0:29,0:29:81.15:0,81,811	0/0:11,0:11:26.91:0,27,242
chr10	85230147	.	C	CA	1992.76	PASS	AB=0.619;AC=11;AF=0.196;AN=56;BaseQRankSum=-6.806;DP=562;FS=16.651;HRun=10;HaplotypeScore=57.9550;InbreedingCoeff=0.7944;MQ=78.17;MQ0=0;MQRankSum=-0.792;QD=19.54;ReadPosRankSum=0.176;VQSLOD=2.6914;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:27:39.91:0,40,530	0/0:8,0:8:20.98:0,21,172	0/0:10,0:11:14.08:0,14,105	0/0:23,0:20:13.97:0,14,108	0/0:28,0:29:67.94:0,68,547	0/0:1,0:24:44.82:0,45,129	1/1:4,11:15:30.08:320,30,0	0/0:24,0:25:46.95:0,47,373	1/1:3,8:11:2.42:231,2,0	0/0:21,0:21:53.93:0,54,443	0/0:15,0:15:35.96:0,36,296	0/1:5,7:13:46.70:147,0,47	1/1:1,17:19:44.95:461,45,0	1/1:5,13:19:11.28:310,11,0	0/0:17,0:17:44.94:0,45,369	0/0:12,0:13:26:0,26,203	0/0:27,0:27:74.91:0,75,616	0/0:11,0:11:26.96:0,27,222	0/0:14,1:15:3.96:0,4,237	0/0:31,0:31:86.89:0,87,714	0/0:14,0:14:38.94:0,39,320	1/1:1,24:25:66.13:691,66,0	0/0:23,0:25:66.99:0,67,528	0/0:19,0:19:44.92:0,45,369	0/0:30,0:30:74.89:0,75,613	0/0:31,0:31:86.87:0,87,710	0/0:28,0:27:65.77:0,66,530	0/0:16,0:16:41.94:0,42,345
chr10	85231443	.	TAGC	T	545.29	PASS	AC=12;AF=0.545;AN=22;BaseQRankSum=5.439;DP=471;FS=1.006;HRun=0;HaplotypeScore=61.1689;InbreedingCoeff=0.8178;MQ=71.84;MQ0=11;MQRankSum=0.646;QD=5.80;ReadPosRankSum=-1.745;VQSLOD=1.9641;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	1/1:16,0:22:5.57:31,6,0	./.	1/1:9,5:14:9.03:115,9,0	./.	./.	1/1:13,5:18:12.04:153,12,0	1/1:6,4:11:12:136,12,0	1/1:9,6:15:12.04:153,12,0	0/0:15,0:14:18.06:0,18,308	1/1:10,4:14:6.02:77,6,0	0/0:31,0:31:42.14:0,42,770	0/0:35,1:36:9.84:0,10,760	./.	./.	./.	./.	./.	0/0:51,0:51:42.14:0,42,774	./.	./.	0/0:14,0:17:6.45:0,6,63	./.
chr10	85232326	.	A	AAC	406.15	PASS	AB=0.928;AC=13;AF=0.260;AN=50;BaseQRankSum=-0.792;DP=569;FS=6.613;HRun=0;HaplotypeScore=96.3989;InbreedingCoeff=0.0961;MQ=77.48;MQ0=10;MQRankSum=-0.296;QD=2.49;ReadPosRankSum=-2.158;VQSLOD=0.8262;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:47:35.48:0,35,348	./.	./.	./.	0/0:19,0:19:8.91:0,9,97	0/1:16,0:18:9.13:9,0,93	0/1:23,1:29:17.37:125,0,17	1/1:15,0:15:1.25:3,1,0	0/1:8,6:16:52.77:77,0,53	0/0:16,0:16:5.96:0,6,57	0/0:11,0:12:17.85:0,18,159	0/0:11,0:16:5.84:0,6,46	0/1:12,0:11:12.03:12,0,114	0/0:11,0:11:9.02:0,9,96	0/0:13,0:12:6:0,6,57	1/1:6,8:14:12.04:178,12,0	0/0:32,0:33:37.49:0,37,366	0/1:19,0:19:24.16:24,0,193	0/0:15,0:15:15.03:0,15,154	0/1:15,0:15:18.45:18,0,176	0/0:34,0:39:20.83:0,21,182	0/0:18,0:20:26.56:0,27,229	0/0:14,0:14:15.01:0,15,145	0/0:29,0:30:38.67:0,39,365	0/0:21,0:23:32.74:0,33,319	0/1:16,0:16:57.67:58,0,103	0/0:15,0:15:9:0,9,88	1/1:8,1:9:3.01:44,3,0
chr10	85233935	.	TC	T	15094.36	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=10.331;DP=658;FS=1.126;HRun=4;HaplotypeScore=114.7476;InbreedingCoeff=0.9877;MQ=85.23;MQ0=1;MQRankSum=-6.287;QD=30.68;ReadPosRankSum=3.833;VQSLOD=4.2195;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,60:60:99:1896,159,0	1/1:1,7:8:18.05:215,18,0	0/0:38,0:34:75.13:0,75,869	0/0:34,0:31:61.53:0,62,858	0/0:21,0:21:63.18:0,63,822	0/0:11,0:11:30.10:0,30,406	1/1:0,32:32:84.26:1002,84,0	1/1:1,26:27:78.19:887,78,0	1/1:1,16:17:45.14:537,45,0	1/1:0,18:18:54.14:624,54,0	1/1:1,22:23:63.08:715,63,0	1/1:0,19:19:45.14:537,45,0	1/1:0,10:10:27.08:322,27,0	1/1:1,28:29:72.19:844,72,0	1/1:0,15:15:42.13:502,42,0	1/1:1,24:25:50.89:609,51,0	1/1:1,32:33:87.27:1038,87,0	1/1:0,25:25:69.20:813,69,0	1/1:1,22:23:66.17:758,66,0	1/1:2,25:27:75.14:859,75,0	1/1:2,20:22:45.14:537,45,0	1/1:0,23:23:63.19:750,63,0	0/0:11,0:11:33.08:0,33,410	0/0:28,0:28:81.20:0,81,1017	0/0:22,0:22:63.18:0,63,819	1/1:2,25:27:71.60:864,72,0	1/1:2,21:23:57.17:680,57,0	1/1:0,5:5:9.03:107,9,0
chr10	85234503	.	CCCCCTCTTTCTCT	C	9884.75	PASS	AB=0.858;AC=35;AF=0.625;AN=56;BaseQRankSum=8.981;DP=413;FS=26.287;HRun=0;HaplotypeScore=186.2450;InbreedingCoeff=0.5316;MQ=75.59;MQ0=10;MQRankSum=-9.201;QD=36.88;ReadPosRankSum=0.909;VQSLOD=2.6666;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,2:20:17.60:575,18,0	1/1:4,2:6:5.17:244,5,0	0/0:30,0:19:50.95:0,51,1707	0/0:37,0:23:39:0,39,1677	0/0:14,0:14:33.11:0,33,1875	0/0:13,0:13:39.13:0,39,1898	0/1:11,1:11:26.19:193,0,26	0/1:25,0:25:13.51:178,0,14	1/1:13,7:20:41.93:1101,42,0	1/1:10,2:12:11.77:447,12,0	0/0:5,0:5:2.51:0,3,7	0/1:8,4:12:13.92:423,0,14	1/1:7,2:9:4.87:377,5,0	1/1:15,1:15:8.37:399,8,0	1/1:10,3:12:18.09:762,18,0	1/1:7,9:15:28.38:1135,28,0	0/1:13,2:12:4.63:324,0,5	0/1:7,4:11:9.84:398,0,10	1/1:11,0:9:3:278,3,0	1/1:6,2:8:8.85:291,9,0	1/1:20,1:21:23.01:437,23,0	1/1:6,3:9:13.21:291,13,0	0/0:9,0:9:27.09:0,27,1326	0/0:27,0:27:78.27:0,78,4419	0/0:10,0:10:27.09:0,27,1115	1/1:5,6:11:23.90:899,24,0	1/1:9,3:10:26.30:899,26,0	1/1:6,1:7:10.27:234,10,0
chr10	85234506	.	C	CTCT	10665.75	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=5.953;DP=395;FS=35.792;HRun=0;HaplotypeScore=118.4113;InbreedingCoeff=0.9151;MQ=77.03;MQ0=11;MQRankSum=-11.321;QD=43.36;ReadPosRankSum=0.835;VQSLOD=3.3021;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,14:19:48.11:940,48,0	1/1:2,3:5:12.03:231,12,0	0/0:33,0:22:26.36:0,26,745	0/0:42,0:27:2.16:0,2,734	0/0:13,0:13:33.11:0,33,614	0/0:15,0:15:45.12:0,45,747	1/1:2,8:10:27.09:597,27,0	1/1:4,9:15:27.07:534,27,0	1/1:8,11:19:44.33:732,44,0	1/1:3,7:11:27.04:467,27,0	1/1:1,3:4:3.01:69,3,0	1/1:5,7:12:32.13:624,32,0	1/1:4,4:8:24.05:401,24,0	1/1:2,11:13:30.10:642,30,0	1/1:6,4:11:33.09:598,33,0	1/1:10,5:15:39.09:583,39,0	1/1:6,7:11:26.74:456,27,0	1/1:4,6:10:27.09:539,27,0	1/1:8,3:9:27.08:477,27,0	1/1:3,2:5:14.63:218,15,0	1/1:2,18:22:32.74:716,33,0	1/1:3,5:8:20.94:423,21,0	0/0:9,0:9:27.09:0,27,482	0/0:26,0:26:78.27:0,78,1406	0/0:9,0:9:26.97:0,27,420	1/1:6,5:11:33.10:624,33,0	1/1:6,6:10:33.09:566,33,0	1/1:2,3:5:12.03:229,12,0
chr10	85234520	.	TCTCTCTCCGTC	T	5177.39	PASS	AB=0.983;AC=28;AF=0.500;AN=56;BaseQRankSum=12.305;DP=430;FS=10.807;HRun=0;HaplotypeScore=194.8755;InbreedingCoeff=0.0525;MQ=67.03;MQ0=14;MQRankSum=-9.215;QD=22.32;ReadPosRankSum=4.320;VQSLOD=3.1372;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:5.45:264,5,0	1/1:3,0:3:6.02:128,6,0	0/0:44,0:23:38.57:0,39,1468	0/0:64,0:27:19.33:0,19,1091	0/0:18,0:18:48.16:0,48,2290	0/0:20,0:20:57.19:0,57,2409	0/1:9,0:9:26.69:118,0,27	0/1:12,0:12:28.34:28,0,131	0/1:15,1:16:29.15:631,0,29	1/1:7,0:7:5.57:228,6,0	0/0:6,0:6:3.88:0,4,40	0/1:13,0:13:30.57:266,0,31	0/1:8,0:8:24.56:227,0,25	0/1:10,0:9:48.33:155,0,48	1/1:13,2:15:26.88:443,27,0	1/1:14,0:14:26.49:724,26,0	0/1:18,0:16:20.27:160,0,20	0/1:9,0:8:99:238,0,112	0/1:5,0:6:45.94:46,0,72	1/1:7,0:7:2.21:144,2,0	0/1:21,0:21:8.46:84,0,8	0/1:10,0:10:50.02:95,0,50	0/0:9,0:9:27.08:0,27,1086	0/0:27,0:27:81.28:0,81,4370	0/0:8,0:8:24.07:0,24,1069	0/1:12,0:12:14.35:522,0,14	1/1:10,2:11:29.12:560,29,0	1/1:5,0:5:9.13:116,9,0
chr10	85234523	.	CTCTCCG	C	5243.66	PASS	AC=40;AF=0.741;AN=54;BaseQRankSum=11.765;DP=438;FS=14.122;HRun=0;HaplotypeScore=159.5815;InbreedingCoeff=0.9114;MQ=66.10;MQ0=14;MQRankSum=-9.797;QD=22.31;ReadPosRankSum=-0.324;VQSLOD=3.2947;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,3:24:29.34:381,29,0	1/1:4,0:4:6.02:89,6,0	0/0:47,0:22:39.40:0,39,1044	0/0:66,0:27:29.08:0,29,680	0/0:17,0:17:45.15:0,45,1461	0/0:21,0:21:51.17:0,51,1606	1/1:6,1:7:8.98:145,9,0	1/1:12,1:13:23.43:234,23,0	1/1:15,0:15:38.57:507,39,0	1/1:6,0:6:14.88:210,15,0	./.	1/1:13,0:13:16.81:188,17,0	1/1:8,0:8:12.03:177,12,0	1/1:9,2:11:21.01:292,21,0	1/1:18,0:18:29.36:384,29,0	1/1:14,0:14:35.29:515,35,0	1/1:13,1:13:20.42:210,20,0	1/1:9,0:8:12.04:206,12,0	1/1:8,0:8:17.61:202,18,0	1/1:8,0:8:9.01:105,9,0	1/1:19,0:19:5.02:80,5,0	1/1:11,1:12:20.66:164,21,0	0/0:8,0:8:21.07:0,21,703	0/0:26,0:26:78.27:0,78,2723	0/0:10,0:10:27.09:0,27,811	1/1:11,1:12:32.89:516,33,0	1/1:11,2:12:29.77:495,30,0	1/1:6,0:6:11.77:144,12,0
chr10	85234526	.	TCCG	T	2786.91	PASS	AB=0.818;AC=36;AF=0.643;AN=56;BaseQRankSum=11.824;DP=438;FS=26.903;HRun=0;HaplotypeScore=148.6700;InbreedingCoeff=0.5764;MQ=66.00;MQ0=14;MQRankSum=-10.088;QD=11.76;ReadPosRankSum=1.669;VQSLOD=1.4773;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,2:24:20.95:121,21,0	1/1:2,2:4:5.85:45,6,0	0/0:47,1:23:43.75:0,44,1070	0/0:69,0:28:17.91:0,18,805	0/0:17,0:17:48.15:0,48,1122	0/0:21,0:21:60.19:0,60,1317	1/1:6,2:8:14.90:119,15,0	0/1:8,3:11:11.08:168,0,11	0/1:7,7:15:6.95:242,0,7	0/1:2,2:6:4.07:95,0,4	0/1:7,0:8:0:0,0,0	1/1:6,4:10:16.95:126,17,0	1/1:5,2:7:10.84:100,11,0	1/1:9,1:11:6.82:122,7,0	1/1:15,3:19:27.64:230,28,0	1/1:4,10:14:35.63:357,36,0	1/1:10,2:11:19.40:131,19,0	0/1:5,4:8:20.44:124,0,20	0/1:8,0:8:4.37:101,0,4	1/1:6,2:8:8.89:90,9,0	1/1:13,2:18:9.30:63,9,0	1/1:8,4:12:10.61:132,11,0	0/0:8,0:8:24.07:0,24,540	0/0:28,0:28:84.26:0,84,1999	0/0:10,0:10:30.10:0,30,689	1/1:3,6:11:31.93:279,32,0	1/1:10,3:14:22.26:240,22,0	1/1:5,1:6:11.75:95,12,0
chr10	85234527	.	CCG	C	5161.85	PASS	AB=0.980;AC=41;AF=0.759;AN=54;BaseQRankSum=12.268;DP=404;FS=25.417;HRun=0;HaplotypeScore=121.6755;InbreedingCoeff=0.8838;MQ=68.16;MQ0=14;MQRankSum=-9.973;QD=21.16;ReadPosRankSum=0.060;VQSLOD=3.0937;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,14:21:30.09:370,30,0	1/1:2,1:3:6:61,6,0	0/1:47,1:23:0.51:1,0,762	0/0:68,0:28:14.55:0,15,587	0/0:16,0:16:45.15:0,45,895	0/0:20,0:20:57.19:0,57,1038	1/1:5,2:7:15.04:187,15,0	1/1:5,5:10:27.08:346,27,0	1/1:13,1:14:38.73:434,39,0	1/1:5,0:5:15.04:194,15,0	./.	1/1:4,4:8:18.02:220,18,0	1/1:3,2:5:12.03:141,12,0	1/1:9,0:9:24.05:305,24,0	1/1:6,10:16:29.95:365,30,0	1/1:11,1:12:36.09:441,36,0	1/1:4,8:11:20.41:237,20,0	1/1:6,1:6:15.05:198,15,0	1/1:1,5:6:18.06:259,18,0	1/1:2,4:6:9:94,9,0	1/1:8,6:14:12.03:138,12,0	1/1:8,1:9:21.03:255,21,0	0/0:9,0:9:24.08:0,24,469	0/0:28,0:28:84.26:0,84,1649	0/0:12,0:12:36.12:0,36,626	1/1:9,2:11:33.04:404,33,0	1/1:9,5:13:22.69:330,23,0	1/1:1,5:6:12.04:183,12,0
chr10	85234530	.	TC	T	1543.24	PASS	AB=0.691;AC=37;AF=0.661;AN=56;BaseQRankSum=10.387;DP=415;FS=18.841;HRun=1;HaplotypeScore=130.7660;InbreedingCoeff=0.5493;MQ=70.30;MQ0=13;MQRankSum=-9.022;QD=7.31;ReadPosRankSum=0.897;VQSLOD=-0.4111;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,2:22:0.99:55,1,0	0/1:1,2:3:3.90:14,0,4	0/0:47,0:24:50.34:0,50,704	0/0:69,0:30:26.17:0,26,686	0/0:18,0:18:51.17:0,51,811	0/0:20,0:20:60.20:0,60,939	1/1:6,2:8:20.42:120,20,0	1/1:7,3:10:21.12:103,21,0	0/1:6,7:13:0.57:131,0,1	0/1:3,2:5:12.64:50,0,13	1/1:8,0:8:6.36:42,6,0	1/1:6,4:10:16.02:98,16,0	1/1:3,2:5:2.37:49,2,0	1/1:7,1:8:8.32:58,8,0	1/1:13,3:16:23.50:127,23,0	1/1:2,10:12:28.38:195,28,0	1/1:10,2:11:12.21:58,12,0	1/1:4,4:7:14.32:105,14,0	1/1:6,0:6:10.38:51,10,0	1/1:4,2:6:8.71:82,9,0	1/1:13,2:14:8.98:41,9,0	1/1:5,4:9:6.82:83,7,0	0/0:9,0:9:27.09:0,27,431	0/0:28,0:28:84.29:0,84,1339	0/0:13,0:13:39.12:0,39,601	0/1:5,6:11:2.95:109,0,3	0/1:13,3:15:5.67:126,0,6	1/1:6,1:7:1.84:34,2,0
chr10	85235023	.	T	TAACA	22404.65	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-12.431;DP=588;FS=0.000;HRun=0;HaplotypeScore=86.4141;InbreedingCoeff=0.9670;MQ=71.51;MQ0=0;MQRankSum=-3.291;QD=50.57;ReadPosRankSum=-0.533;VQSLOD=5.4354;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,11:14:27.09:669,27,0	1/1:3,9:12:27.09:638,27,0	0/0:20,0:20:27.78:0,28,485	0/0:13,0:13:22.65:0,23,305	0/0:31,0:31:75.26:0,75,1259	0/0:21,0:21:60.21:0,60,1008	1/1:8,21:30:57.20:1414,57,0	1/1:22,20:44:96.31:2231,96,0	1/1:3,13:17:36.12:892,36,0	1/1:14,16:32:60.21:1441,60,0	1/1:8,12:20:39.13:963,39,0	1/1:0,2:2:3.01:74,3,0	1/1:9,14:23:45.15:1066,45,0	1/1:4,13:17:42.14:1040,42,0	1/1:2,13:15:39.13:967,39,0	1/1:7,9:16:27.09:670,27,0	1/1:7,12:19:36.12:893,36,0	1/1:3,15:19:36.12:893,36,0	1/1:6,13:22:54.15:1184,54,0	1/1:8,15:24:51.10:1134,51,0	1/1:6,14:20:42.14:1042,42,0	1/1:9,8:18:24.08:567,24,0	0/0:21,0:21:42.13:0,42,680	0/0:16,0:15:45.15:0,45,742	0/0:23,0:23:57.18:0,57,933	1/1:7,32:39:99:2394,99,0	1/1:7,20:27:57.20:1413,57,0	1/1:1,11:13:33.11:818,33,0
chr10	85235460	.	C	CTT	4054.17	PASS	AB=0.720;AC=29;AF=0.518;AN=56;BaseQRankSum=-2.382;DP=569;FS=5.565;HRun=15;HaplotypeScore=81.1995;InbreedingCoeff=0.6179;MQ=76.62;MQ0=1;MQRankSum=-1.001;QD=11.11;ReadPosRankSum=-2.181;VQSLOD=2.1723;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:29:0.84:157,0,1	1/1:4,5:12:15.92:155,16,0	0/0:43,0:19:17.60:0,18,118	0/1:19,0:12:23.56:24,0,34	0/0:27,0:28:36.29:0,36,294	0/0:17,0:20:26.13:0,26,233	0/1:6,8:15:9.19:108,0,9	1/1:17,8:29:29.73:304,30,0	0/0:8,0:8:20.84:0,21,166	1/1:9,14:24:37.28:402,37,0	1/1:18,4:28:34.99:431,35,0	0/0:13,0:13:8.97:0,9,109	0/0:9,0:12:29.12:0,29,205	0/0:13,0:14:10.90:0,11,109	1/1:8,13:24:8.07:243,8,0	0/1:6,0:17:15.53:16,0,52	1/1:6,12:22:30.68:299,31,0	1/1:9,12:23:13.31:116,13,0	1/1:10,3:14:2.82:205,3,0	1/1:9,13:25:50.76:440,51,0	1/1:3,8:11:9.03:113,9,0	0/0:20,0:20:12.56:0,13,256	0/0:17,0:17:37.29:0,37,267	0/0:12,0:12:23.66:0,24,189	0/0:15,0:17:32.44:0,32,243	1/1:10,18:31:55.22:532,55,0	0/1:7,11:19:24.03:164,0,24	1/1:3,13:22:32.06:346,32,0
chr10	85235918	.	T	TG	1788.24	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.805;DP=571;FS=2.667;HRun=0;HaplotypeScore=66.3503;InbreedingCoeff=0.9924;MQ=88.36;MQ0=0;MQRankSum=-0.942;QD=33.12;ReadPosRankSum=3.234;VQSLOD=3.3871;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.30:0,90,1258	0/0:9,0:9:24.08:0,24,336	0/0:22,0:22:60.17:0,60,801	0/0:20,0:21:52.98:0,53,616	0/0:25,0:25:75.25:0,75,1049	0/0:26,0:26:78.26:0,78,1091	0/0:33,0:33:96.32:0,96,1342	0/0:37,0:35:99:0,99,1367	1/1:0,13:13:36.12:509,36,0	0/0:31,0:31:93.27:0,93,1266	0/0:19,0:19:54.17:0,54,740	1/1:0,11:11:33.11:462,33,0	1/1:0,10:10:30.09:396,30,0	1/1:0,15:15:39.13:549,39,0	0/0:19,0:19:48.12:0,48,650	0/0:14,0:14:42.14:0,42,587	0/0:29,0:29:87.25:0,87,1195	0/0:19,0:19:57.15:0,57,775	0/0:23,0:23:69.20:0,69,944	0/0:20,0:20:60.20:0,60,839	0/0:34,0:34:96.32:0,96,1343	1/1:0,0:5:12.64:46,13,0	0/0:10,0:10:30.10:0,30,420	0/0:24,0:24:72.24:0,72,1005	0/0:9,0:9:24.08:0,24,335	0/0:22,0:22:66.21:0,66,906	0/0:27,0:27:75.24:0,75,1044	0/0:12,0:12:36.12:0,36,504
chr10	85236690	.	GAGGCCACACCTCCTCCAACA	G	6141.27	PASS	AB=1.000;AC=39;AF=0.722;AN=54;BaseQRankSum=2.118;DP=622;FS=1.950;HRun=0;HaplotypeScore=317.2828;InbreedingCoeff=0.7411;MQ=72.70;MQ0=3;MQRankSum=-0.813;QD=14.38;ReadPosRankSum=3.624;VQSLOD=3.1827;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:39:30.05:489,30,0	1/1:10,0:10:9.03:152,9,0	0/0:26,0:19:0:0,0,0	0/0:28,0:23:3.86:0,4,22	0/0:14,0:14:12.04:0,12,424	0/0:27,0:27:39.13:0,39,1872	0/1:27,0:26:18.87:230,0,19	./.	1/1:20,0:20:18.05:252,18,0	1/1:17,8:25:24.05:450,24,0	1/1:7,0:7:6.02:137,6,0	1/1:23,0:23:12.03:146,12,0	1/1:14,0:14:12.02:138,12,0	1/1:20,0:20:21.06:365,21,0	1/1:21,0:21:21.07:336,21,0	1/1:17,0:17:24.05:390,24,0	1/1:31,0:31:27.05:446,27,0	1/1:18,0:18:24.08:392,24,0	1/1:13,6:19:18.05:341,18,0	1/1:7,6:13:8.99:96,9,0	1/1:66,0:66:54.10:792,54,0	1/1:13,8:21:8.98:92,9,0	0/0:16,0:15:18.06:0,18,737	0/0:49,0:49:84.24:0,84,4094	0/0:17,0:17:21.07:0,21,1197	1/1:9,11:20:24.06:569,24,0	1/1:13,0:13:18.03:285,18,0	1/1:3,0:3:3.01:46,3,0
chr10	85237639	.	AGAGATGTCGTCTGT	A	27740.47	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=15.363;DP=475;FS=5.894;HRun=0;HaplotypeScore=205.2355;InbreedingCoeff=0.9892;MQ=65.03;MQ0=0;MQRankSum=-15.472;QD=95.00;ReadPosRankSum=4.929;VQSLOD=4.1036;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.26:0,75,4906	1/1:0,14:14:30.10:1268,30,0	0/0:19,0:19:51.99:0,52,2584	0/0:12,0:12:33.11:0,33,1845	0/0:23,0:23:66.23:0,66,3914	0/0:21,0:21:63.17:0,63,4100	0/0:17,0:17:48.16:0,48,3265	1/1:3,15:18:44.97:1198,45,0	1/1:0,19:19:54.19:2281,54,0	1/1:0,17:17:45.13:1718,45,0	1/1:1,14:15:23.84:1013,24,0	1/1:0,14:14:36.12:1521,36,0	1/1:2,10:12:30.10:1267,30,0	1/1:0,17:17:48.16:2028,48,0	1/1:0,19:19:54.19:2282,54,0	1/1:1,17:18:45.15:1901,45,0	1/1:1,25:26:42.14:1775,42,0	1/1:0,6:6:12.04:507,12,0	1/1:0,8:8:24.08:879,24,0	1/1:0,17:17:39.13:1506,39,0	1/1:2,9:11:12.04:507,12,0	1/1:1,11:12:27.09:1085,27,0	0/0:20,0:20:54.19:0,54,3307	0/0:23,0:23:69.24:0,69,4713	0/0:22,0:22:63.19:0,63,3982	1/1:2,20:22:57.15:2128,57,0	1/1:2,16:18:42.14:1736,42,0	1/1:0,9:9:27.09:1141,27,0
chr10	85237978	.	T	TC	10340.53	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-13.822;DP=680;FS=2.115;HRun=2;HaplotypeScore=66.4682;InbreedingCoeff=0.9956;MQ=78.78;MQ0=0;MQRankSum=-2.294;QD=37.88;ReadPosRankSum=-0.863;VQSLOD=5.1053;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,1680	1/1:3,9:12:30.10:418,30,0	0/0:22,0:22:53.53:0,54,695	0/0:18,0:18:42.49:0,42,553	0/0:27,0:27:78.22:0,78,951	0/0:17,0:17:51.16:0,51,632	0/0:36,0:36:99:0,108,1288	1/1:2,31:32:93.27:1283,93,0	0/0:33,0:33:99:0,99,1227	1/1:1,23:24:69.21:972,69,0	1/1:0,14:14:36.04:492,36,0	0/0:27,0:27:78.25:0,78,967	0/0:18,0:18:51.16:0,51,632	0/0:14,0:14:36.11:0,36,446	1/1:1,31:32:78.26:1123,78,0	0/0:20,0:20:57.18:0,57,706	1/1:1,27:28:66.22:950,66,0	0/0:27,0:27:78.25:0,78,966	1/1:0,19:19:57.17:786,57,0	1/1:1,27:28:63.21:906,63,0	1/1:0,30:30:90.30:1295,90,0	0/0:21,0:21:57.17:0,57,696	0/0:22,0:22:66.19:0,66,805	0/0:36,0:36:99:0,102,1236	0/0:21,0:21:60.19:0,60,744	1/1:1,25:26:75.25:1078,75,0	1/1:0,20:20:60.20:864,60,0	1/1:1,6:7:12.04:172,12,0
chr10	85238603	.	TC	T	13461.52	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=11.723;DP=643;FS=0.616;HRun=2;HaplotypeScore=67.5030;InbreedingCoeff=0.9690;MQ=84.99;MQ0=0;MQRankSum=-4.510;QD=34.08;ReadPosRankSum=2.940;VQSLOD=5.2035;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,168,2419	1/1:0,12:12:33.11:428,33,0	0/0:29,0:29:59.63:0,60,881	0/0:18,0:18:47.89:0,48,664	0/0:29,0:29:87.28:0,87,1279	0/0:19,0:19:57.19:0,57,850	0/0:23,0:23:69.23:0,69,1034	1/1:0,28:28:75.19:940,75,0	1/1:1,14:15:36.12:467,36,0	1/1:2,33:35:93.30:1206,93,0	1/1:2,23:25:63.16:797,63,0	1/1:1,25:26:68.03:861,68,0	1/1:1,19:20:57.19:739,57,0	1/1:0,18:18:54.18:701,54,0	1/1:0,14:14:42.14:545,42,0	1/1:20,0:20:2.13:191,2,0	1/1:0,29:29:78.25:1012,78,0	1/1:0,24:24:69.22:896,69,0	1/1:1,18:19:54.17:686,54,0	1/1:0,12:12:36.12:465,36,0	1/1:1,32:33:87.28:1129,87,0	1/1:0,20:20:57.19:740,57,0	0/0:24,0:24:69.23:0,69,1033	0/0:28,0:28:81.27:0,81,1205	0/0:21,0:21:63.19:0,63,906	1/1:0,15:15:45.13:567,45,0	1/1:0,21:21:57.19:739,57,0	1/1:0,9:9:27.09:350,27,0
chr10	85238605	.	CG	C	5835.03	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=16.695;DP=652;FS=0.000;HRun=2;HaplotypeScore=94.9502;InbreedingCoeff=0.8758;MQ=83.57;MQ0=0;MQRankSum=-4.540;QD=14.48;ReadPosRankSum=4.355;VQSLOD=4.4465;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,157,2330	1/1:13,0:13:31.28:168,31,0	0/0:26,0:26:22.21:0,22,794	0/0:19,0:19:44.29:0,44,641	0/0:29,0:29:87.28:0,87,1281	0/0:22,0:22:66.18:0,66,911	0/0:26,0:26:78.19:0,78,1101	0/1:30,0:30:2.06:318,0,2	1/1:14,0:14:34.69:202,35,0	1/1:35,0:35:44.50:396,45,0	1/1:24,0:24:56.50:305,56,0	1/1:26,0:26:50.03:347,50,0	1/1:20,0:20:33.16:318,33,0	1/1:18,0:18:51.63:285,52,0	1/1:15,0:15:17.74:183,18,0	1/1:1,21:22:51.17:662,51,0	1/1:29,0:29:74.87:418,75,0	1/1:24,0:24:65.95:359,66,0	0/1:21,0:21:8.22:236,0,8	1/1:13,0:13:12.99:186,13,0	1/1:32,0:32:83.18:463,83,0	1/1:20,0:20:54.19:289,54,0	0/0:23,0:23:69.23:0,69,1031	0/0:28,0:28:84.26:0,84,1219	0/0:20,0:20:60.20:0,60,896	1/1:17,0:17:16.58:219,17,0	1/1:21,0:20:54.81:319,55,0	1/1:9,0:9:26.32:162,26,0
chr10	85239456	.	TAAA	T	5684.67	PASS	AB=0.500;AC=27;AF=0.482;AN=56;BaseQRankSum=2.118;DP=477;FS=8.024;HRun=13;HaplotypeScore=95.7087;InbreedingCoeff=0.9362;MQ=69.10;MQ0=3;MQRankSum=-2.669;QD=25.72;ReadPosRankSum=3.864;VQSLOD=3.8408;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:26:35.90:0,36,298	1/1:1,6:7:18.05:219,18,0	0/0:39,0:20:40.52:0,41,505	0/0:23,0:15:11.95:0,12,205	0/0:32,0:32:72.21:0,72,1280	0/0:14,0:15:36.10:0,36,644	0/0:3,0:21:18.42:0,18,60	1/1:4,15:19:45.07:533,45,0	0/0:3,0:11:19.20:0,19,156	1/1:5,18:24:57.03:663,57,0	1/1:0,12:12:33.10:401,33,0	0/0:1,0:10:23.91:0,24,183	0/0:2,0:11:23.91:0,24,183	0/0:1,0:12:20.92:0,21,161	1/1:4,8:11:21.06:255,21,0	0/1:0,0:9:5.28:10,0,5	1/1:3,16:20:42.01:492,42,0	1/1:1,5:7:14.97:164,15,0	1/1:6,20:24:54.03:642,54,0	1/1:2,13:15:42.06:474,42,0	1/1:5,11:16:27.05:326,27,0	0/0:0,0:13:25.14:0,25,185	0/0:13,0:15:39.06:0,39,616	0/0:12,0:13:33.09:0,33,564	0/0:12,0:12:36.12:0,36,678	1/1:7,13:20:42.08:498,42,0	1/1:4,23:26:63.13:751,63,0	1/1:0,7:7:21.06:255,21,0
chr10	85239533	.	CATGT	C	2289.98	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-0.291;DP=404;FS=16.668;HRun=0;HaplotypeScore=81.7118;InbreedingCoeff=0.7121;MQ=63.22;MQ0=12;MQRankSum=-4.096;QD=11.34;ReadPosRankSum=1.589;VQSLOD=1.7221;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:48.06:0,48,747	1/1:4,0:4:2.74:47,3,0	0/0:21,0:12:22.33:0,22,273	0/0:30,0:22:38.70:0,39,522	0/0:9,0:9:14.90:0,15,150	0/0:13,0:13:20.99:0,21,255	0/0:15,0:14:38.95:0,39,505	1/1:22,0:21:57:436,57,0	0/1:13,0:10:10.60:11,0,56	1/1:11,0:10:22.89:157,23,0	1/1:9,0:11:14.85:144,15,0	0/0:7,0:6:4.38:0,4,83	0/1:9,0:8:19.35:19,0,70	0/0:11,0:9:7.40:0,7,107	1/1:0,10:11:6.02:103,6,0	1/1:11,0:11:20.39:162,20,0	1/1:10,0:12:26.36:207,26,0	0/0:12,0:11:33.04:0,33,606	1/1:15,0:16:47.49:377,47,0	1/1:12,0:12:19.87:139,20,0	1/1:13,0:13:10.66:106,11,0	0/1:13,0:13:5.13:5,0,53	0/0:17,0:16:32.87:0,33,381	0/0:21,0:21:45.50:0,46,715	0/0:21,0:21:47.59:0,48,425	1/1:16,0:17:45.38:333,45,0	1/1:14,0:15:33.49:218,33,0	1/1:5,0:3:5.91:38,6,0
chr10	85239534	.	A	ATG	878.64	PASS	AB=0.869;AC=15;AF=0.313;AN=48;BaseQRankSum=-6.235;DP=421;FS=30.908;HRun=0;HaplotypeScore=84.9745;InbreedingCoeff=0.4005;MQ=62.51;MQ0=13;MQRankSum=3.760;QD=5.82;ReadPosRankSum=-0.227;VQSLOD=0.9318;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,3:28:15.91:194,16,0	0/1:4,0:4:0:0,0,0	./.	./.	1/1:7,2:10:3.01:44,3,0	1/1:8,7:14:6.02:89,6,0	0/1:12,3:18:16.21:103,0,16	./.	0/0:7,0:9:8.48:0,8,41	0/0:11,0:10:2.84:0,3,14	0/0:12,0:12:5.68:0,6,28	0/0:6,0:6:2.84:0,3,14	0/0:4,0:8:11.20:0,11,52	0/0:7,0:8:2.84:0,3,14	0/0:11,0:11:5.42:0,5,28	0/0:12,0:11:5.52:0,6,25	0/0:13,0:12:5.68:0,6,28	0/1:11,2:13:85.21:97,0,85	0/0:18,0:16:5.68:0,6,28	0/0:15,0:13:2.84:0,3,14	./.	0/0:11,0:13:4.41:0,4,14	1/1:15,2:16:15.02:168,15,0	1/1:16,6:22:17.74:229,18,0	1/1:21,0:21:8.99:102,9,0	0/0:17,0:17:4.66:0,5,19	0/0:15,0:15:2.84:0,3,14	0/0:6,0:4:2.92:0,3,17
chr10	85239831	.	ACTACTGCATCTGCTGGGATCACAGGTGTGCC	A	56.80	PASS	AC=6;AF=0.250;AN=24;BaseQRankSum=-0.195;DP=484;FS=0.000;HRun=0;HaplotypeScore=54.6306;InbreedingCoeff=0.4627;MQ=15.04;MQ0=346;MQRankSum=-0.651;QD=1.72;ReadPosRankSum=-1.236;VQSLOD=1.2740;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	0/0:24,0:7:9.03:0,9,148	./.	./.	1/1:12,0:4:5.99:58,6,0	0/0:29,0:7:10.34:0,10,95	./.	1/1:12,0:4:3.01:36,3,0	1/1:9,0:3:3.01:55,3,0	./.	0/0:25,0:10:2.98:0,3,21	0/0:11,0:3:3.01:0,3,56	./.	./.	./.	0/0:13,0:7:0.47:0,0,1	./.	./.	0/0:20,0:9:1.11:0,1,12	./.	0/0:30,0:18:12.04:0,12,181	0/0:21,0:5:12.40:0,12,94	0/0:7,0:3:0.89:0,1,2	./.
chr10	85241780	.	CAGTCATGCTCATTGGTCAA	C	15189.76	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=14.911;DP=516;FS=1.870;HRun=0;HaplotypeScore=264.6150;InbreedingCoeff=0.9686;MQ=84.03;MQ0=0;MQRankSum=-12.697;QD=91.50;ReadPosRankSum=4.305;VQSLOD=4.0859;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,9853	1/1:4,5:9:12.04:520,12,0	0/0:17,0:17:48.16:0,48,2989	0/0:20,0:20:45.15:0,45,3333	0/0:27,0:27:81.28:0,81,6943	0/0:19,0:19:51.18:0,51,4437	0/0:20,0:20:51.16:0,51,4331	1/1:7,10:17:30.10:1497,30,0	0/0:21,0:21:60.21:0,60,4821	1/1:6,9:15:27.09:1336,27,0	1/1:1,6:7:18.06:965,18,0	0/0:26,0:26:78.27:0,78,5852	0/0:21,0:21:60.21:0,60,5342	0/0:18,0:18:54.19:0,54,4837	1/1:1,24:25:69.24:3595,69,0	0/0:19,0:19:57.18:0,57,4545	1/1:2,10:12:21.07:1085,21,0	0/0:18,0:18:54.19:0,54,4839	1/1:7,5:12:15.04:486,15,0	1/1:2,9:11:27.05:1447,27,0	1/1:10,5:15:6.02:227,6,0	0/0:19,0:19:54.19:0,54,4458	0/0:16,0:16:48.16:0,48,3648	0/0:30,0:30:81.28:0,81,6408	0/0:16,0:16:42.14:0,42,3737	1/1:7,13:20:39.13:1782,39,0	1/1:4,14:18:33.11:1769,33,0	1/1:1,4:5:9.03:482,9,0
chr10	85242080	.	CG	C	5986.96	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=2.504;DP=414;FS=0.000;HRun=2;HaplotypeScore=70.4647;InbreedingCoeff=0.9042;MQ=50.97;MQ0=23;MQRankSum=-0.939;QD=20.57;ReadPosRankSum=2.835;VQSLOD=4.9057;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:31:49.68:0,50,293	1/1:2,3:5:6.02:76,6,0	1/1:8,0:1:1.55:4,2,0	0/0:8,0:5:5.42:0,5,24	0/0:16,0:16:34.45:0,34,353	0/0:12,0:12:31.29:0,31,242	0/0:16,0:13:26.15:0,26,179	1/1:3,18:19:50.93:544,51,0	1/1:9,0:8:5.98:47,6,0	1/1:0,15:15:41.98:474,42,0	1/1:1,18:19:48.06:566,48,0	1/1:11,0:11:23.92:186,24,0	1/1:12,0:12:23.90:184,24,0	1/1:11,0:11:23.90:182,24,0	1/1:4,16:17:33.10:412,33,0	1/1:3,12:12:15.05:188,15,0	1/1:2,29:29:51.03:618,51,0	1/1:0,11:11:18.06:225,18,0	1/1:1,14:15:36.06:418,36,0	1/1:2,12:13:15.05:190,15,0	1/1:1,6:7:12.04:151,12,0	1/1:10,0:10:20.93:163,21,0	0/0:14,0:14:26.31:0,26,279	0/0:13,0:12:26.99:0,27,354	0/0:9,0:9:20.76:0,21,186	1/1:2,18:20:50.60:504,51,0	1/1:3,16:17:33.11:415,33,0	1/1:1,17:17:36.11:440,36,0
chr10	85242081	.	GGAAAAAAAA	G	3057.53	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-4.999;DP=418;FS=1.186;HRun=0;HaplotypeScore=130.1476;InbreedingCoeff=0.5723;MQ=51.59;MQ0=23;MQRankSum=-7.264;QD=28.58;ReadPosRankSum=1.893;VQSLOD=3.5234;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:31:81.24:0,81,2736	0/0:3,0:3:6.02:0,6,126	0/0:9,0:2:6.02:0,6,184	0/0:9,0:5:5.85:0,6,66	0/0:17,0:17:50.92:0,51,1639	0/0:13,0:13:38.99:0,39,887	0/0:16,0:13:33.01:0,33,904	0/1:21,0:19:43.30:43,0,768	1/1:1,8:8:6.02:187,6,0	0/0:15,0:15:3.30:0,3,721	0/0:20,0:20:56.93:0,57,1097	1/1:0,11:11:24.08:749,24,0	1/1:0,12:12:24.08:747,24,0	1/1:0,11:11:24.08:711,24,0	0/0:19,0:16:32.90:0,33,652	0/0:16,0:13:4.12:0,4,337	0/0:31,0:29:49.08:0,49,1000	0/0:11,0:11:18.06:0,18,384	0/1:15,0:15:39.02:39,0,539	0/0:13,0:12:24.08:0,24,600	0/0:6,0:6:12.04:0,12,252	1/1:0,9:9:21.01:656,21,0	0/0:15,0:15:42.51:0,43,1435	0/0:15,0:14:39.07:0,39,1451	0/0:10,0:10:30.10:0,30,1083	0/1:19,0:19:99:101,0,664	0/0:21,0:19:39.13:0,39,905	0/0:18,0:17:36.12:0,36,807
chr10	85242082	.	GA	G	1904.55	PASS	AB=0.838;AC=42;AF=0.750;AN=56;BaseQRankSum=9.564;DP=426;FS=9.422;HRun=15;HaplotypeScore=85.6209;InbreedingCoeff=0.3439;MQ=51.75;MQ0=23;MQRankSum=-0.070;QD=5.19;ReadPosRankSum=7.105;VQSLOD=1.6838;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:11,21:30:9.25:271,0,9	1/1:3,0:3:5.49:24,5,0	1/1:8,1:2:2.94:19,3,0	0/0:9,1:7:4.55:0,5,37	0/0:14,2:18:15.70:0,16,210	0/1:10,1:13:3.22:3,0,85	0/1:10,6:13:12.25:62,0,12	1/1:21,0:19:20.28:138,20,0	1/1:9,0:8:4.07:12,4,0	1/1:16,0:16:25.18:132,25,0	1/1:19,1:20:35.33:213,35,0	1/1:11,0:11:16.30:50,16,0	1/1:12,0:12:16.30:50,16,0	1/1:11,0:11:14.26:44,14,0	1/1:20,0:17:20.70:128,21,0	1/1:16,0:13:3.95:50,4,0	1/1:31,0:29:41.48:194,41,0	1/1:11,0:11:16.67:78,17,0	1/1:15,0:15:19.97:117,20,0	0/1:14,0:13:24.57:36,0,25	1/1:6,0:6:11.16:52,11,0	1/1:9,0:9:14.25:44,14,0	0/0:14,1:15:8.53:0,9,175	0/0:15,0:14:30.12:0,30,242	0/1:7,2:10:14.57:15,0,115	0/1:22,0:22:7.92:62,0,8	1/1:21,0:19:6.34:106,6,0	1/1:18,0:17:34.24:176,34,0
chr10	85242201	.	GT	G	337.24	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.124;DP=503;FS=1.143;HRun=4;HaplotypeScore=49.7819;InbreedingCoeff=0.9964;MQ=86.99;MQ0=0;MQRankSum=-0.778;QD=28.10;ReadPosRankSum=1.303;VQSLOD=2.8126;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:48.16:0,48,671	0/0:11,0:11:33.08:0,33,438	0/0:15,0:15:42.11:0,42,559	0/0:21,0:21:60.17:0,60,809	0/0:29,0:29:84.28:0,84,1173	0/0:23,0:23:63.21:0,63,882	0/0:16,0:16:42.14:0,42,587	0/0:25,0:25:72.23:0,72,994	0/0:14,0:14:36.11:0,36,489	0/0:20,0:20:57.19:0,57,789	0/0:17,0:17:51.17:0,51,714	0/0:22,0:22:66.22:0,66,923	0/0:13,0:13:39.13:0,39,542	0/0:14,0:14:42.14:0,42,588	0/0:18,0:18:54.18:0,54,750	1/1:0,12:12:36.11:432,36,0	0/0:21,0:21:57.13:0,57,758	0/0:12,0:12:33.09:0,33,440	0/0:24,0:24:66.22:0,66,922	0/0:25,0:25:63.20:0,63,865	0/0:21,0:21:60.20:0,60,840	0/0:18,0:18:54.18:0,54,756	0/0:13,0:13:36.11:0,36,487	0/0:13,0:12:39.11:0,39,514	0/0:9,0:9:24.08:0,24,336	0/0:26,0:26:75.20:0,75,998	0/0:22,0:22:60.20:0,60,840	0/0:11,0:11:30.10:0,30,420
chr10	85242578	.	TATCC	T	5734.33	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=4.213;DP=651;FS=2.385;HRun=0;HaplotypeScore=120.4057;InbreedingCoeff=0.9233;MQ=57.37;MQ0=9;MQRankSum=5.521;QD=21.00;ReadPosRankSum=2.628;VQSLOD=4.8975;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:57.05:0,57,995	1/1:3,5:8:15.05:242,15,0	0/0:27,0:14:8.95:0,9,76	0/0:38,0:16:14.11:0,14,147	0/0:28,0:28:60.13:0,60,1096	0/0:24,0:24:57.16:0,57,1118	0/0:20,0:20:1.21:0,1,587	1/1:23,0:22:27.01:243,27,0	0/0:15,0:37:44.98:0,45,652	1/1:9,31:40:87.18:1165,87,0	1/1:4,10:14:24.08:387,24,0	0/0:8,0:21:30.06:0,30,466	0/0:12,0:26:44.09:0,44,687	0/0:8,0:19:11.91:0,12,112	1/1:3,23:25:27.09:436,27,0	0/0:18,0:18:48.13:0,48,904	1/1:6,7:13:15.05:242,15,0	0/0:16,0:15:28.08:0,28,262	1/1:9,8:17:23.56:257,24,0	1/1:7,27:33:51.06:729,51,0	1/1:9,20:29:33.11:533,33,0	0/0:11,0:21:33.52:0,34,477	0/0:25,0:25:51.58:0,52,898	0/0:17,0:17:42.07:0,42,732	0/0:14,0:14:27.07:0,27,505	1/1:15,25:40:75.11:968,75,0	1/1:7,16:22:30.10:484,30,0	1/1:2,4:6:3.01:48,3,0
chr10	85243241	.	G	GCATC	4434.97	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=2.032;DP=610;FS=3.908;HRun=0;HaplotypeScore=113.1607;InbreedingCoeff=0.0708;MQ=68.05;MQ0=4;MQRankSum=-1.610;QD=15.24;ReadPosRankSum=-0.114;VQSLOD=4.2563;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:65.70:0,66,605	0/0:9,0:9:24.01:0,24,249	0/0:25,0:21:47.26:0,47,535	0/0:18,0:16:35.13:0,35,372	0/0:29,0:29:37.98:0,38,1041	0/0:17,0:17:45.03:0,45,541	1/1:25,0:25:47.97:409,48,0	0/0:38,0:36:94.25:0,94,865	1/1:5,23:28:22.98:958,23,0	0/0:31,0:31:86.71:0,87,910	0/0:21,0:21:50.88:0,51,476	0/1:17,0:17:55.24:235,0,55	0/1:12,0:12:22.56:191,0,23	0/1:18,0:18:98.80:161,0,99	0/0:25,0:25:65.92:0,66,597	1/1:20,0:20:27.09:560,27,0	0/0:28,0:28:67.79:0,68,649	0/1:17,0:17:99:155,0,134	0/1:16,0:16:58.70:59,0,301	0/1:21,0:21:99:306,0,219	0/1:30,0:29:99:390,0,282	0/1:21,0:21:55.25:204,0,55	0/0:26,0:26:75.12:0,75,1090	0/0:10,0:10:27.03:0,27,377	0/0:13,0:13:33.05:0,33,489	0/1:29,0:29:99:305,0,405	0/1:25,0:25:99:482,0,156	0/1:12,0:12:21.14:21,0,130
chr10	85243242	.	C	CATCT	4688.07	PASS	AB=0.878;AC=21;AF=0.404;AN=52;BaseQRankSum=-5.666;DP=618;FS=0.000;HRun=0;HaplotypeScore=120.0936;InbreedingCoeff=0.6624;MQ=66.93;MQ0=4;MQRankSum=0.100;QD=15.57;ReadPosRankSum=-1.246;VQSLOD=4.3089;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:30:15.91:0,16,188	0/0:5,0:9:12.01:0,12,112	./.	./.	0/1:29,1:30:21.81:22,0,637	0/0:15,0:17:21.06:0,21,302	1/1:26,0:26:6.02:102,6,0	1/1:43,0:40:14.96:156,15,0	0/1:27,0:27:25.38:614,0,25	0/0:14,0:31:42.52:0,43,392	0/0:13,0:20:15.49:0,15,140	0/0:17,0:17:15.05:0,15,228	0/0:12,0:12:9.03:0,9,136	0/0:18,0:18:27.06:0,27,369	0/0:18,0:25:12.01:0,12,112	1/1:0,0:20:27.09:474,27,0	0/0:20,0:27:8.86:0,9,181	0/1:9,9:18:28.88:269,0,29	1/1:13,3:16:9.03:191,9,0	1/1:12,10:23:24.08:560,24,0	1/1:16,14:29:30.10:700,30,0	0/0:21,0:21:21.05:0,21,281	0/0:25,0:26:48.15:0,48,697	0/0:10,0:10:18.05:0,18,255	0/0:13,0:13:24.06:0,24,345	1/1:18,11:31:11.14:702,11,0	1/1:11,14:25:36.12:829,36,0	1/1:8,4:12:3.01:70,3,0
chr10	85244425	.	TG	T	13353.56	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=13.984;DP=654;FS=1.664;HRun=3;HaplotypeScore=65.4742;InbreedingCoeff=0.9948;MQ=90.35;MQ0=0;MQRankSum=-4.432;QD=34.24;ReadPosRankSum=3.936;VQSLOD=5.4743;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1557	1/1:1,8:9:21.06:260,21,0	0/0:27,0:27:72.19:0,72,985	0/0:25,0:25:69.19:0,69,956	0/0:31,0:31:87.29:0,87,1250	0/0:21,0:21:60.20:0,60,861	0/0:28,0:28:84.27:0,84,1191	1/1:1,26:27:78.25:967,78,0	1/1:0,18:18:48.15:595,48,0	1/1:0,36:36:99:1333,108,0	1/1:1,19:20:54.17:668,54,0	1/1:1,25:26:72.23:891,72,0	1/1:1,16:17:50.52:603,51,0	1/1:1,18:19:54.17:669,54,0	1/1:0,18:18:45.14:558,45,0	1/1:2,20:22:57.18:707,57,0	1/1:0,29:29:78.25:967,78,0	0/0:23,0:23:69.23:0,69,992	1/1:0,15:15:45.14:558,45,0	1/1:0,18:18:54.17:669,54,0	1/1:0,26:26:69.22:855,69,0	1/1:0,33:33:81.25:1004,81,0	0/0:18,0:18:54.18:0,54,775	0/0:37,0:37:99:0,102,1466	0/0:16,0:16:45.14:0,45,626	1/1:0,27:27:81.20:973,81,0	1/1:1,25:26:75.23:929,75,0	1/1:1,3:4:12.04:146,12,0
chr10	85244765	.	G	GA	2506.60	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.928;DP=581;FS=4.181;HRun=6;HaplotypeScore=82.3820;InbreedingCoeff=0.9912;MQ=77.33;MQ0=0;MQRankSum=-1.359;QD=31.73;ReadPosRankSum=0.084;VQSLOD=3.9367;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,47:51:99:1663,138,0	0/0:9,0:9:24.05:0,24,245	0/0:11,0:11:29.99:0,30,285	0/0:16,0:16:36.03:0,36,346	0/0:17,0:17:42.09:0,42,428	0/0:24,0:24:63.14:0,63,643	1/1:1,27:28:81.13:965,81,0	0/0:21,0:21:54.10:0,54,542	0/0:21,0:21:57.13:0,57,582	0/0:23,0:23:63.14:0,63,642	0/0:15,0:15:39.09:0,39,398	0/0:19,0:19:54.12:0,54,551	0/0:15,0:15:39.07:0,39,391	0/0:20,0:20:54.12:0,54,550	0/0:23,0:23:66.15:0,66,673	0/0:11,0:11:33.07:0,33,336	0/0:30,0:30:69.15:0,69,704	0/0:33,0:33:87.12:0,87,866	0/0:22,0:22:63.13:0,63,637	0/0:22,0:22:51.11:0,51,520	0/0:27,0:27:48.10:0,48,489	0/0:14,0:14:39.08:0,39,397	0/0:17,0:17:51.07:0,51,503	0/0:26,0:26:72.16:0,72,734	0/0:21,0:21:57.13:0,57,581	0/0:20,1:21:19.34:0,19,497	0/0:18,0:18:51.11:0,51,520	0/0:6,0:6:18.04:0,18,184
chr10	85244804	.	TC	T	109.41	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=4.135;DP=554;FS=8.480;HRun=2;HaplotypeScore=127.6599;InbreedingCoeff=0.9913;MQ=83.72;MQ0=0;MQRankSum=-4.514;QD=8.42;ReadPosRankSum=0.839;VQSLOD=0.6239;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,111,1604	0/0:7,0:7:18.06:0,18,266	0/0:21,0:21:59.84:0,60,770	0/0:18,0:18:53.76:0,54,730	0/0:13,0:13:39.11:0,39,544	0/0:24,0:24:72.24:0,72,1079	0/0:32,0:32:90.22:0,90,1296	0/0:30,0:30:87.29:0,87,1296	0/0:23,0:23:69.22:0,69,1011	0/0:21,0:21:63.12:0,63,867	0/0:13,0:13:36.11:0,36,518	0/0:12,0:12:36.11:0,36,519	0/0:12,0:12:36.12:0,36,540	0/0:17,0:17:48.16:0,48,718	0/0:17,0:17:51.16:0,51,744	1/1:2,11:13:34.15:204,34,0	0/0:29,0:29:78.25:0,78,1139	0/0:25,0:25:75.25:0,75,1115	0/0:20,0:20:54.16:0,54,771	0/0:16,0:16:48.16:0,48,718	0/0:34,0:34:74.85:0,75,1079	0/0:16,0:16:42.13:0,42,593	0/0:16,0:16:48.16:0,48,719	0/0:24,0:24:72.22:0,72,1039	0/0:22,0:22:66.22:0,66,988	0/0:21,0:21:63.21:0,63,925	0/0:14,0:14:39.13:0,39,578	./.
chr10	85244807	.	A	AGATTT	887.15	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=1.931;DP=563;FS=5.833;HRun=0;HaplotypeScore=181.8332;InbreedingCoeff=0.9955;MQ=85.65;MQ0=0;MQRankSum=-4.509;QD=68.24;ReadPosRankSum=0.735;VQSLOD=4.1950;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,2627	0/0:7,0:7:21.07:0,21,461	0/0:23,0:23:66.20:0,66,1311	0/0:21,0:21:57.09:0,57,1122	0/0:13,0:13:39.13:0,39,906	0/0:25,0:25:75.26:0,75,1726	0/0:31,0:31:93.30:0,93,2060	0/0:31,0:31:87.30:0,87,2007	0/0:22,0:22:66.23:0,66,1519	0/0:22,0:22:63.17:0,63,1379	0/0:13,0:13:36.08:0,36,788	0/0:13,0:13:39.09:0,39,815	0/0:13,0:13:39.12:0,39,865	0/0:16,0:16:48.16:0,48,1116	0/0:18,0:18:48.16:0,48,1118	1/1:2,11:13:39.13:982,39,0	0/0:28,0:28:75.21:0,75,1652	0/0:26,0:26:75.19:0,75,1650	0/0:19,0:19:51.17:0,51,1158	0/0:17,0:17:51.18:0,51,1187	0/0:35,0:35:75.08:0,75,1514	0/0:17,0:17:42.10:0,42,928	0/0:16,0:16:48.16:0,48,1117	0/0:25,0:25:72.25:0,72,1655	0/0:23,0:23:69.23:0,69,1565	0/0:21,0:21:60.21:0,60,1397	0/0:13,0:13:39.13:0,39,908	./.
chr10	85244824	.	TAAC	T	2933.35	PASS	AB=0.909;AC=7;AF=0.130;AN=54;BaseQRankSum=6.363;DP=534;FS=1.073;HRun=0;HaplotypeScore=150.3431;InbreedingCoeff=0.6626;MQ=82.89;MQ0=0;MQRankSum=-5.811;QD=36.67;ReadPosRankSum=3.289;VQSLOD=4.6770;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,33:37:92.79:1607,93,0	1/1:5,0:5:0.61:2,1,0	0/0:18,0:18:50.38:0,50,946	0/0:20,0:21:56.98:0,57,1148	0/0:16,0:16:42.13:0,42,930	0/0:25,0:25:75.24:0,75,1763	1/1:1,27:28:81.22:1429,81,0	0/0:27,0:27:28.16:0,28,268	0/0:24,0:24:72.15:0,72,1574	0/0:19,0:19:16.52:0,17,178	0/0:9,0:9:12.21:0,12,131	0/0:13,0:13:39.10:0,39,818	0/0:16,0:16:48.16:0,48,1180	0/0:14,0:14:42.12:0,42,860	0/0:18,0:18:1.12:0,1,35	0/0:14,0:14:42.08:0,42,883	0/0:25,0:25:28.27:0,28,259	0/0:28,0:28:84.26:0,84,2014	0/0:21,0:21:14.73:0,15,167	0/0:15,0:15:28.70:0,29,285	0/0:32,0:32:38.03:0,38,344	0/0:14,0:14:42.14:0,42,924	0/0:14,0:14:41.98:0,42,825	0/0:26,0:26:78.27:0,78,1895	0/0:22,0:22:66.21:0,66,1527	0/0:23,0:23:8.95:0,9,96	0/1:9,1:10:24.62:25,0,44	./.
chr10	85244826	.	ACGACGCCGG	A	11608.45	PASS	AC=22;AF=0.407;AN=54;BaseQRankSum=6.933;DP=524;FS=2.157;HRun=0;HaplotypeScore=180.5552;InbreedingCoeff=0.9955;MQ=82.66;MQ0=0;MQRankSum=-13.159;QD=57.47;ReadPosRankSum=-2.115;VQSLOD=4.4754;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:81.23:0,81,1844	1/1:0,5:5:15.05:425,15,0	0/0:17,0:17:40.02:0,40,1498	0/0:21,0:21:57.13:0,57,2157	0/0:16,0:16:36.12:0,36,1639	0/0:24,0:24:72.25:0,72,3053	0/0:28,0:28:76.14:0,76,1889	1/1:5,22:27:66.21:1830,66,0	0/0:23,0:23:63.22:0,63,2988	1/1:2,16:18:48.16:1379,48,0	1/1:1,7:8:17.98:407,18,0	0/0:12,0:12:30.10:0,30,1457	0/0:16,0:16:48.16:0,48,2280	0/0:13,0:13:30.10:0,30,1350	1/1:2,16:18:39.13:1193,39,0	0/0:14,0:14:39.12:0,39,1591	1/1:8,18:26:30.06:847,30,0	0/0:29,0:29:84.29:0,84,3921	1/1:3,17:20:51.18:1522,51,0	1/1:4,10:14:23.99:470,24,0	1/1:10,23:33:47.99:914,48,0	0/0:15,0:15:42.13:0,42,1647	0/0:12,0:12:30.10:0,30,1436	0/0:26,0:26:78.27:0,78,3644	0/0:21,0:21:63.19:0,63,2746	1/1:2,20:23:63.22:1887,63,0	1/1:2,8:10:24.08:735,24,0	./.
chr10	85245202	.	G	GT	9447.63	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-6.785;DP=602;FS=0.000;HRun=8;HaplotypeScore=74.8051;InbreedingCoeff=0.9287;MQ=74.86;MQ0=10;MQRankSum=-4.210;QD=25.47;ReadPosRankSum=0.314;VQSLOD=5.3550;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:84.01:0,84,762	1/1:0,8:8:24.07:275,24,0	0/0:34,0:19:6.46:0,6,133	0/1:46,0:25:1.52:2,0,144	0/0:21,0:21:56.99:0,57,514	0/0:31,0:31:78.01:0,78,707	0/0:20,0:20:54.03:0,54,493	1/1:4,22:25:64.76:685,65,0	1/1:3,14:17:48.14:551,48,0	1/1:5,28:32:83.92:945,84,0	1/1:3,14:17:47.96:516,48,0	1/1:0,4:4:12.04:138,12,0	1/1:3,8:11:30.05:331,30,0	1/1:4,17:22:57:638,57,0	1/1:4,20:24:57.17:656,57,0	0/0:11,0:12:32.05:0,32,277	1/1:11,24:35:99:1124,99,0	0/0:18,0:18:48.02:0,48,439	1/1:4,14:17:16.67:410,17,0	1/1:4,15:19:54.04:592,54,0	1/1:3,10:12:33.10:381,33,0	1/1:5,22:27:72.07:798,72,0	0/0:16,0:16:45.02:0,45,411	0/0:24,1:25:34.42:0,34,568	0/0:19,1:20:15.90:0,16,385	1/1:5,18:22:54.16:623,54,0	1/1:6,17:23:45.76:644,46,0	1/1:2,3:5:12.04:138,12,0
chr10	85245222	.	GT	G	1920.91	PASS	AB=0.930;AC=14;AF=0.250;AN=56;BaseQRankSum=4.515;DP=593;FS=3.131;HRun=11;HaplotypeScore=96.2235;InbreedingCoeff=0.8436;MQ=63.92;MQ0=13;MQRankSum=-3.011;QD=11.04;ReadPosRankSum=1.770;VQSLOD=3.4771;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,28:35:77.84:640,78,0	0/0:11,0:12:26.90:0,27,270	0/1:23,1:10:8.62:9,0,102	0/0:42,0:22:16.51:0,17,208	0/0:20,1:21:26.09:0,26,509	0/0:30,0:31:81.02:0,81,838	0/0:6,0:22:49.51:0,50,242	0/0:25,0:25:54.12:0,54,567	1/1:7,17:24:50.91:418,51,0	0/0:23,1:23:44.56:0,45,634	0/0:18,1:19:26.50:0,26,485	1/1:0,7:7:14.98:123,15,0	1/1:2,5:7:14.98:123,15,0	1/1:8,17:25:44.90:368,45,0	0/1:24,3:27:0.71:1,0,592	0/0:5,0:12:25.97:0,26,164	0/0:27,2:29:19.72:0,20,605	0/0:15,0:15:35.92:0,36,366	0/0:22,0:21:44.33:0,44,454	0/0:17,0:17:42.02:0,42,414	0/0:17,0:16:36.08:0,36,376	1/1:6,18:25:52.94:425,53,0	0/0:14,0:15:17.35:0,17,374	0/0:29,0:29:78.20:0,78,831	0/0:16,0:18:47.89:0,48,475	0/0:18,0:17:51.10:0,51,524	0/0:24,0:23:61.36:0,61,620	0/0:5,0:5:12.03:0,12,128
chr10	85245291	.	G	GGT	9993.66	PASS	AB=0.572;AC=23;AF=0.411;AN=56;BaseQRankSum=-14.795;DP=639;FS=2.584;HRun=0;HaplotypeScore=79.1284;InbreedingCoeff=0.6221;MQ=73.92;MQ0=10;MQRankSum=1.245;QD=31.23;ReadPosRankSum=-0.433;VQSLOD=6.3375;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,24:39:4.89:1068,5,0	1/1:3,10:13:27.09:438,27,0	0/0:55,0:29:3.38:0,3,353	0/0:35,0:20:15.71:0,16,110	0/0:15,0:16:38.95:0,39,449	0/0:28,0:29:64.26:0,64,737	0/1:6,18:24:19.16:725,0,19	1/1:5,16:21:48.16:774,48,0	0/0:20,0:20:36.11:0,36,440	1/1:13,12:24:8.46:605,8,0	1/1:5,16:21:45.15:730,45,0	0/0:13,0:13:27.08:0,27,330	0/0:15,0:16:47.98:0,48,564	0/0:11,0:11:21.07:0,21,257	1/1:7,14:20:42.14:682,42,0	0/0:9,0:10:17.89:0,18,197	1/1:3,27:29:57.19:925,57,0	0/0:15,0:16:29.93:0,30,344	0/1:3,7:10:0.51:317,0,1	0/1:4,21:25:10.14:831,0,10	0/1:6,22:28:16.14:770,0,16	0/0:20,0:20:42.01:0,42,513	0/0:19,0:19:48.15:0,48,586	0/0:34,0:34:69.22:0,69,843	0/0:22,0:22:45.14:0,45,550	1/1:3,26:29:78.27:1255,78,0	0/1:8,15:23:27.68:583,0,28	1/1:0,7:7:18.06:292,18,0
chr10	85246537	.	T	TC	802.39	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=4.019;DP=315;FS=4.159;HRun=1;HaplotypeScore=55.2925;InbreedingCoeff=0.7874;MQ=49.92;MQ0=21;MQRankSum=-0.066;QD=10.70;ReadPosRankSum=3.042;VQSLOD=1.8481;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,2:19:32.41:206,32,0	0/0:5,0:5:14.72:0,15,106	0/0:11,0:4:5.97:0,6,61	0/1:8,0:5:0.23:0,0,64	0/0:18,0:16:30.09:0,30,400	0/0:6,0:6:11.98:0,12,128	0/1:14,0:13:0.74:1,0,57	0/0:24,0:22:43.28:0,43,419	1/1:2,9:10:17.95:200,18,0	0/0:14,0:14:30.29:0,30,201	0/0:9,0:9:9.91:0,10,66	1/1:0,2:2:6.02:73,6,0	1/1:1,2:3:8.99:93,9,0	1/1:2,7:9:20.97:238,21,0	0/0:7,0:7:20.61:0,21,146	0/0:8,0:7:18.01:0,18,234	0/0:17,0:16:21.31:0,21,136	0/0:16,0:16:35.97:0,36,401	0/0:14,0:13:25.46:0,25,233	0/0:13,0:13:30.39:0,30,204	0/0:11,0:9:17.34:0,17,109	1/1:1,8:9:14.97:165,15,0	0/0:10,0:7:14.84:0,15,179	0/0:12,0:7:13.72:0,14,188	0/0:11,0:10:21.32:0,21,249	0/0:13,0:12:20.04:0,20,132	0/0:12,0:12:22.11:0,22,135	0/0:9,0:8:5.75:0,6,30
chr10	85252889	.	G	GC	2676.06	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-7.114;DP=478;FS=1.550;HRun=7;HaplotypeScore=49.9379;InbreedingCoeff=0.9919;MQ=77.98;MQ0=0;MQRankSum=0.671;QD=21.76;ReadPosRankSum=2.879;VQSLOD=3.3943;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:25:48.01:558,48,0	0/0:8,0:8:21:0,21,195	0/0:15,0:15:33.21:0,33,302	0/0:16,0:15:15.52:0,16,210	0/0:16,0:16:39.05:0,39,376	0/0:21,0:21:57.09:0,57,548	1/1:3,19:22:42.13:507,42,0	0/0:25,0:25:44.78:0,45,422	1/1:3,16:19:42.13:505,42,0	0/0:17,0:17:39.05:0,39,372	0/0:12,0:12:30.03:0,30,284	1/1:3,18:21:42.13:507,42,0	1/1:1,8:9:15.05:181,15,0	1/1:1,12:13:27.08:326,27,0	0/0:12,0:12:30.04:0,30,289	0/0:20,0:20:60.06:0,60,569	0/0:26,0:26:60.04:0,60,569	0/0:14,0:14:39.02:0,39,368	0/0:16,0:16:42.06:0,42,403	0/0:14,0:14:30.04:0,30,290	0/0:32,0:32:80.85:0,81,756	1/1:2,11:13:24.07:289,24,0	0/0:14,0:14:35.98:0,36,335	0/0:31,0:31:87.12:0,87,832	0/0:14,0:14:39.03:0,39,368	0/0:12,0:12:30.04:0,30,290	0/0:13,0:13:36.06:0,36,347	0/0:7,0:7:21.03:0,21,203
chr10	85253660	.	G	GT	4227.42	PASS	AB=0.889;AC=29;AF=0.518;AN=56;BaseQRankSum=-8.316;DP=392;FS=2.481;HRun=10;HaplotypeScore=56.3575;InbreedingCoeff=0.8098;MQ=84.68;MQ0=0;MQRankSum=0.438;QD=20.62;ReadPosRankSum=-0.097;VQSLOD=5.6694;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:24.06:256,24,0	1/1:0,5:5:14.95:145,15,0	0/0:31,0:26:29.93:0,30,190	0/1:18,0:14:11.47:11,0,41	0/0:21,1:22:26.94:0,27,411	0/0:20,0:21:58.44:0,58,452	0/0:6,0:6:11.99:0,12,99	1/1:6,18:25:51.25:503,51,0	0/0:16,0:16:47.95:0,48,394	1/1:1,13:14:39.10:415,39,0	1/1:3,7:10:20.45:223,20,0	0/0:5,0:5:11.01:0,11,77	0/0:9,0:9:26.88:0,27,209	0/1:12,0:12:0.22:0,0,141	1/1:0,12:12:30.08:320,30,0	1/1:1,4:6:11.99:115,12,0	1/1:4,8:13:23.89:238,24,0	0/0:19,0:19:36.51:0,37,148	1/1:5,15:20:46.25:454,46,0	1/1:1,14:16:38.75:371,39,0	1/1:1,1:2:6.02:64,6,0	0/0:14,0:14:32.91:0,33,263	0/0:18,0:18:47.72:0,48,371	0/0:11,0:11:23.95:0,24,193	0/0:14,0:14:24.92:0,25,268	1/1:1,16:17:48.09:494,48,0	1/1:3,17:22:55.97:546,56,0	0/1:2,2:4:5.03:73,0,5
chr10	85253670	.	TA	T	383.68	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.125;DP=371;FS=1.909;HRun=6;HaplotypeScore=63.8026;InbreedingCoeff=0.7706;MQ=83.36;MQ0=0;MQRankSum=-1.686;QD=16.68;ReadPosRankSum=1.330;VQSLOD=3.4123;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:23.91:0,24,182	0/0:6,0:6:14.95:0,15,116	0/0:29,0:23:23.63:0,24,212	0/0:14,0:11:17.16:0,17,100	0/0:25,0:25:68.04:0,68,774	0/0:23,0:23:60.66:0,61,740	0/0:5,0:5:12.04:0,12,151	0/0:20,0:20:40.84:0,41,310	0/0:17,0:17:51.12:0,51,611	0/0:14,0:14:41.86:0,42,325	0/0:10,0:10:26.51:0,27,193	0/0:4,0:4:6.02:0,6,76	0/0:10,0:10:27.03:0,27,308	0/0:10,0:10:18.05:0,18,207	0/0:13,0:13:32.88:0,33,252	1/1:7,0:7:5.91:79,6,0	0/0:10,0:10:26.90:0,27,205	1/1:2,14:16:39.10:416,39,0	0/0:16,0:16:38.87:0,39,306	0/0:15,0:15:41.12:0,41,329	0/0:2,0:2:5.98:0,6,46	0/0:13,0:13:27.08:0,27,329	0/0:16,0:16:39.12:0,39,491	0/0:8,0:8:21.07:0,21,264	0/0:13,0:13:27.09:0,27,340	0/0:19,0:19:49.40:0,49,378	0/0:22,0:22:59.73:0,60,449	0/0:4,0:4:5.98:0,6,45
chr10	85254785	.	A	ATG	1716.19	PASS	AB=0.882;AC=39;AF=0.750;AN=52;BaseQRankSum=3.370;DP=562;FS=12.956;HRun=0;HaplotypeScore=109.2748;InbreedingCoeff=0.6199;MQ=52.39;MQ0=9;MQRankSum=-4.063;QD=4.43;ReadPosRankSum=-1.329;VQSLOD=1.2561;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:13,0:13:5.96:54,6,0	./.	0/0:13,0:7:3.01:0,3,34	0/0:27,0:27:39.10:0,39,437	0/1:13,2:15:24.63:25,0,171	1/1:21,0:21:2.88:22,3,0	1/1:17,0:16:14.46:99,14,0	1/1:15,6:22:11.42:180,11,0	1/1:23,0:23:23.75:164,24,0	1/1:22,0:21:5.86:38,6,0	1/1:6,10:16:3.55:174,4,0	1/1:10,8:18:12.03:163,12,0	1/1:13,6:18:9.03:136,9,0	1/1:16,0:19:8.99:76,9,0	0/0:6,0:13:14.68:0,15,71	1/1:19,1:24:8.92:67,9,0	1/1:9,0:16:9:79,9,0	1/1:21,0:18:16.12:110,16,0	1/1:17,0:17:6:68,6,0	1/1:21,0:21:3:25,3,0	1/1:14,6:20:9.03:137,9,0	0/0:26,0:25:18.05:0,18,202	0/0:23,0:23:39.09:0,39,424	0/0:21,0:22:38.93:0,39,408	1/1:28,0:27:20.84:158,21,0	1/1:26,0:25:11.91:90,12,0	1/1:7,0:6:3:26,3,0
chr10	85255699	.	GA	G	623.06	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.346;DP=554;FS=6.795;HRun=12;HaplotypeScore=93.8842;InbreedingCoeff=0.6395;MQ=63.33;MQ0=3;MQRankSum=1.330;QD=14.16;ReadPosRankSum=0.835;VQSLOD=3.8376;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,3:35:20.45:0,20,687	0/0:5,0:5:8.30:0,8,43	0/0:26,1:17:29.91:0,30,266	0/0:26,1:19:1.36:0,1,241	0/0:25,0:25:59.60:0,60,582	0/0:15,1:16:25.42:0,25,418	1/1:3,15:18:35.83:279,36,0	0/0:25,0:25:34.29:0,34,174	0/0:20,0:18:18.64:0,19,104	0/0:23,0:24:17.87:0,18,98	0/0:19,0:20:4.66:0,5,85	0/0:12,0:12:2.84:0,3,14	0/0:3,0:14:2.57:0,3,40	0/0:8,0:15:14.68:0,15,92	0/0:16,0:16:12.96:0,13,78	0/0:4,0:21:42.78:0,43,230	0/0:21,0:22:26.69:0,27,139	0/0:14,0:13:36.07:0,36,365	0/0:19,0:20:30.95:0,31,172	0/0:20,0:20:22.45:0,22,121	0/0:13,0:13:13.10:0,13,58	0/0:9,0:10:8.64:0,9,48	0/0:21,0:21:44.92:0,45,436	1/1:2,24:26:59.77:464,60,0	0/0:22,0:22:35.12:0,35,507	0/0:23,0:24:44.77:0,45,228	0/0:27,0:28:16.35:0,16,104	0/0:10,0:12:9.41:0,9,44
chr10	85255710	.	A	AAAAAAG	8479.98	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=0.526;DP=585;FS=38.967;HRun=0;HaplotypeScore=128.7833;InbreedingCoeff=0.6131;MQ=69.37;MQ0=3;MQRankSum=-5.974;QD=25.78;ReadPosRankSum=-5.910;VQSLOD=1.7004;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,108,1545	1/1:1,0:6:14.89:154,15,0	0/0:27,0:17:10.73:0,11,458	0/0:27,0:22:5.45:0,5,500	0/0:23,0:23:68.53:0,69,1141	0/0:17,0:17:47.73:0,48,799	0/0:17,0:17:39.04:0,39,561	1/1:5,0:26:73.60:843,74,0	0/1:26,0:24:93.35:258,0,93	1/1:6,0:22:49.18:581,49,0	1/1:2,0:20:48.65:699,49,0	0/1:8,0:8:38.92:101,0,39	0/1:13,0:13:36.45:112,0,36	0/1:13,0:13:30.29:185,0,30	1/1:0,0:20:21.07:431,21,0	0/0:21,0:21:53.95:0,54,486	1/1:5,0:25:33.11:634,33,0	0/0:14,0:13:39.12:0,39,701	1/1:7,0:35:88.89:1189,89,0	1/1:4,0:24:48.77:784,49,0	1/1:1,0:14:20.15:370,20,0	0/1:11,0:11:47.71:79,0,48	0/0:18,0:18:51.05:0,51,893	0/0:28,0:28:69.20:0,69,967	0/0:22,0:22:61.67:0,62,1084	1/1:8,2:24:71.90:1086,72,0	1/1:5,0:31:39.80:697,40,0	1/1:2,1:11:12.04:278,12,0
chr10	85256415	.	G	GAC	324.84	PASS	AB=1.000;AC=6;AF=0.111;AN=54;BaseQRankSum=-1.668;DP=619;FS=13.284;HRun=0;HaplotypeScore=126.5930;InbreedingCoeff=0.3385;MQ=40.97;MQ0=34;MQRankSum=2.475;QD=5.00;ReadPosRankSum=-0.490;VQSLOD=2.2279;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:34:23.78:0,24,198	0/0:10,0:10:4.04:0,4,34	./.	0/0:3,0:2:3.01:0,3,39	0/0:32,0:31:45.01:0,45,495	0/0:27,0:26:38.84:0,39,330	0/0:22,0:20:14.51:0,15,119	0/0:34,0:34:95.95:0,96,644	1/1:14,0:13:16.73:172,17,0	0/0:42,0:37:73.71:0,74,507	0/0:21,0:17:12.39:0,12,87	0/1:20,0:20:41.54:122,0,42	1/1:17,0:10:0.22:95,0,0	0/1:14,0:13:13.03:55,0,13	0/0:19,0:19:15.76:0,16,113	0/0:24,0:24:1.36:0,1,88	0/0:22,0:18:26.85:0,27,218	0/0:13,0:12:23.43:0,23,161	0/0:24,0:21:62.59:0,63,515	0/0:23,0:19:8.94:0,9,69	0/0:23,0:19:20.92:0,21,163	0/0:16,15:29:2.95:0,3,22	0/0:16,0:15:11.99:0,12,109	0/0:39,0:37:78.01:0,78,889	0/0:20,0:19:28.82:0,29,362	0/0:31,0:26:60.65:0,61,522	0/0:24,0:20:38.66:0,39,296	0/0:13,0:11:26.79:0,27,193
chr10	85256423	.	G	GACAGAC	166.91	PASS	AB=0.922;AC=7;AF=0.130;AN=54;BaseQRankSum=5.076;DP=654;FS=6.065;HRun=0;HaplotypeScore=161.2355;InbreedingCoeff=-0.0051;MQ=42.54;MQ0=31;MQRankSum=-2.979;QD=1.11;ReadPosRankSum=1.416;VQSLOD=1.8004;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:34:10.81:0,11,106	0/0:11,0:11:1.73:0,2,23	./.	0/0:10,0:6:15:0,15,227	0/0:31,0:30:42.11:0,42,725	0/0:28,0:27:45.56:0,46,635	0/0:24,0:22:1.52:0,2,23	0/0:38,0:38:12.72:0,13,386	0/0:16,0:15:20.62:0,21,299	0/1:44,0:40:60.35:60,0,343	0/1:19,0:16:17.38:20,0,17	0/0:25,0:25:5.52:0,6,322	0/0:20,0:13:13.74:0,14,275	0/0:14,0:13:17.27:0,17,256	1/1:18,0:18:2.40:22,2,0	0/1:10,16:28:76.76:102,0,77	0/0:20,0:16:15.66:0,16,183	0/1:15,0:15:73.46:73,0,139	0/0:26,0:23:53.30:0,53,610	0/0:24,0:20:3.42:0,3,20	0/0:23,0:19:11.35:0,11,80	0/0:33,0:30:2.92:0,3,25	0/0:14,0:14:9.03:0,9,171	0/0:39,0:37:78.25:0,78,1580	0/0:22,0:22:42.57:0,43,787	0/0:31,0:26:47.77:0,48,609	0/1:26,0:22:8.15:8,0,279	0/0:12,0:10:3.96:0,4,9
chr10	85256443	.	CAG	C	5261.16	PASS	AB=0.843;AC=27;AF=0.482;AN=56;BaseQRankSum=8.658;DP=693;FS=36.425;HRun=0;HaplotypeScore=118.2428;InbreedingCoeff=0.7521;MQ=53.67;MQ0=18;MQRankSum=-2.296;QD=13.46;ReadPosRankSum=2.325;VQSLOD=2.7921;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,24:34:24.08:312,24,0	1/1:3,13:16:9.46:186,9,0	0/0:18,0:11:28.35:0,28,366	0/0:39,0:33:71.91:0,72,1119	0/0:27,0:27:54.18:0,54,893	0/0:24,0:24:34.77:0,35,656	1/1:9,19:27:23.25:290,23,0	0/1:28,18:46:25.75:644,0,26	0/0:20,0:20:42.61:0,43,707	1/1:17,22:37:42.71:865,43,0	1/1:14,5:16:12.04:155,12,0	0/0:23,0:23:39.13:0,39,663	0/0:15,0:11:19.52:0,20,356	0/0:19,0:18:33.11:0,33,557	1/1:3,14:17:21.07:273,21,0	0/1:25,0:25:19.60:20,0,227	1/1:8,14:21:19.14:237,19,0	0/0:16,0:16:29.37:0,29,703	1/1:7,13:17:24.15:507,24,0	1/1:8,8:16:5.85:78,6,0	1/1:6,17:20:30.10:390,30,0	0/0:30,0:28:14.93:0,15,251	0/0:11,0:11:15.05:0,15,247	0/0:35,0:34:80.86:0,81,1327	0/0:24,0:24:54.18:0,54,899	0/1:21,7:25:31.67:467,0,32	1/1:11,16:25:29.96:373,30,0	1/1:0,17:17:36.12:464,36,0
chr10	85256453	.	GAC	G	1896.05	PASS	AB=0.931;AC=17;AF=0.304;AN=56;BaseQRankSum=13.445;DP=663;FS=35.984;HRun=0;HaplotypeScore=120.2447;InbreedingCoeff=0.0559;MQ=59.86;MQ0=8;MQRankSum=-3.809;QD=5.80;ReadPosRankSum=3.751;VQSLOD=0.9831;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:37,2:36:58.94:86,0,59	0/1:16,0:16:4.06:84,0,4	0/0:23,0:13:36.95:0,37,547	0/0:54,0:43:93.16:0,93,1551	0/0:24,0:24:60.17:0,60,1067	0/0:21,0:21:47.72:0,48,811	0/1:23,4:26:24.54:71,0,25	0/1:28,2:30:61.21:262,0,61	0/0:20,0:20:41.70:0,42,808	0/1:33,4:34:25.69:396,0,26	0/1:13,2:13:40.01:40,0,51	0/0:23,0:23:45.12:0,45,794	0/0:14,0:12:14.61:0,15,414	0/0:17,0:16:33.11:0,33,635	1/1:16,0:16:20.17:111,20,0	0/0:24,0:24:1.29:0,1,273	1/1:18,0:17:1.28:74,1,0	0/0:16,0:16:44.84:0,45,849	1/1:15,2:16:17.61:231,18,0	0/1:14,2:14:14.27:21,0,14	0/1:21,0:20:14.17:117,0,14	0/0:29,1:29:26.76:0,27,376	0/0:10,0:10:21.04:0,21,337	0/0:37,0:36:90.22:0,90,1585	0/0:23,0:23:59.97:0,60,1081	0/1:27,3:26:21.39:216,0,21	0/1:23,3:25:29.67:182,0,30	0/1:19,0:19:6.86:172,0,7
chr10	85256856	.	C	CTTT	6653.17	PASS	AB=0.551;AC=36;AF=0.643;AN=56;BaseQRankSum=10.733;DP=622;FS=5.130;HRun=9;HaplotypeScore=126.0362;InbreedingCoeff=0.8133;MQ=79.85;MQ0=1;MQRankSum=-2.061;QD=15.58;ReadPosRankSum=1.045;VQSLOD=2.2316;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:36:36.13:78,36,0	1/1:8,2:19:8.09:237,8,0	0/0:19,0:18:38.87:0,39,444	0/0:18,0:17:31.57:0,32,277	0/0:33,0:33:90.23:0,90,1108	0/0:18,0:19:57.12:0,57,700	0/1:2,0:28:11.06:24,0,11	1/1:6,0:18:29.88:232,30,0	1/1:4,15:19:27.09:533,27,0	1/1:9,0:30:59.61:450,60,0	1/1:1,0:16:3.91:255,4,0	1/1:3,16:24:4.24:713,4,0	1/1:5,6:13:18.04:319,18,0	1/1:3,10:14:18.06:352,18,0	1/1:2,0:19:26.90:207,27,0	0/0:16,0:17:48.06:0,48,560	1/1:1,0:34:80.69:620,81,0	0/0:25,0:26:78.13:0,78,944	0/1:4,0:14:5.01:198,0,5	1/1:5,0:25:47.98:337,48,0	1/1:8,0:35:66.50:491,66,0	1/1:4,12:18:31.35:594,31,0	0/0:18,0:18:36.07:0,36,455	0/0:24,0:24:69.20:0,69,848	0/0:19,0:20:48.05:0,48,573	1/1:6,0:31:69.15:518,69,0	1/1:3,0:18:35.88:310,36,0	1/1:2,0:14:25.15:187,25,0
chr10	85257652	.	G	GT	898.61	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.259;DP=553;FS=4.702;HRun=6;HaplotypeScore=61.2632;InbreedingCoeff=0.9301;MQ=76.57;MQ0=0;MQRankSum=0.746;QD=28.08;ReadPosRankSum=-0.729;VQSLOD=3.9954;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1050	0/0:13,0:13:39.09:0,39,397	0/0:12,0:11:19.69:0,20,172	0/0:11,0:11:4.76:0,5,188	0/0:21,0:21:54.11:0,54,546	0/0:21,0:21:60.14:0,60,612	0/0:22,0:22:57.06:0,57,557	0/0:35,0:35:93.17:0,93,929	0/0:14,0:14:39.09:0,39,397	0/0:29,0:29:75.16:0,75,761	0/0:14,0:14:39.09:0,39,398	0/0:13,0:13:39.09:0,39,398	0/0:21,0:21:48.10:0,48,490	0/0:17,0:17:45.07:0,45,446	0/0:17,0:17:45.10:0,45,459	1/1:2,21:23:60.19:755,60,0	0/0:18,0:18:45.08:0,45,451	1/1:0,9:9:21.07:264,21,0	0/0:33,0:33:90.20:0,90,914	0/0:19,0:19:54.12:0,54,551	0/0:11,0:11:30.06:0,30,300	0/0:23,0:23:66.14:0,66,668	0/0:25,0:25:63.09:0,63,627	0/0:11,0:11:30.07:0,30,306	0/0:27,0:27:69.14:0,69,697	0/0:24,0:24:72.14:0,72,724	0/0:24,0:24:72.15:0,72,727	0/0:9,0:9:24.05:0,24,245
chr10	85258025	.	T	TG	7021.52	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-13.447;DP=558;FS=7.978;HRun=7;HaplotypeScore=55.9645;InbreedingCoeff=0.9945;MQ=76.12;MQ0=0;MQRankSum=-1.677;QD=29.63;ReadPosRankSum=1.421;VQSLOD=5.3065;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.13:0,93,892	1/1:1,8:9:18.06:217,18,0	0/0:19,0:15:29.63:0,30,268	0/0:16,0:14:26.80:0,27,232	0/0:27,0:27:66.09:0,66,637	0/0:23,0:23:66.11:0,66,637	0/0:22,0:22:57.09:0,57,550	1/1:2,26:28:75.11:856,75,0	0/0:25,0:25:66.10:0,66,633	1/1:3,17:20:51.16:613,51,0	1/1:3,14:17:45.05:521,45,0	0/0:11,0:11:30.05:0,30,290	0/0:19,0:19:45.07:0,45,435	0/0:14,0:14:42.05:0,42,396	1/1:2,12:14:36.11:435,36,0	0/0:15,0:15:42.05:0,42,402	1/1:1,24:25:63.19:761,63,0	0/0:9,0:9:24.04:0,24,232	1/1:2,11:13:33.09:386,33,0	1/1:1,25:26:75.23:902,75,0	1/1:5,19:24:12.77:538,13,0	0/0:26,0:26:72.10:0,72,690	0/0:23,0:23:57.08:0,57,549	0/0:18,0:18:45.07:0,45,435	0/0:20,0:20:60.08:0,60,575	1/1:1,24:25:72.20:856,72,0	1/1:4,20:24:45.13:537,45,0	1/1:0,12:12:33.10:399,33,0
chr10	85258267	.	CCTT	C	3859.20	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=15.236;DP=761;FS=0.842;HRun=0;HaplotypeScore=120.8354;InbreedingCoeff=0.9936;MQ=73.74;MQ0=0;MQRankSum=-2.042;QD=31.38;ReadPosRankSum=1.754;VQSLOD=4.1741;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,181,3678	0/0:13,0:13:39.11:0,39,780	0/0:40,0:36:85.40:0,85,1470	0/0:29,0:26:71.77:0,72,1063	0/0:23,0:23:46.02:0,46,1171	0/0:28,0:28:81.22:0,81,1641	0/0:18,0:18:48.13:0,48,950	0/0:38,0:38:99:0,111,1776	1/1:1,28:29:66.20:981,66,0	0/0:31,0:31:93.20:0,93,1666	0/0:19,0:19:29.14:0,29,750	1/1:2,21:23:48.16:732,48,0	1/1:1,27:28:47.05:733,47,0	1/1:1,20:21:45.15:690,45,0	0/0:29,0:29:74.14:0,74,1739	0/0:22,0:22:20.50:0,20,263	0/0:24,0:24:66.08:0,66,1218	0/0:11,0:11:19.11:0,19,135	0/0:32,0:32:93.24:0,93,1682	0/0:24,0:24:72.18:0,72,1412	0/0:48,0:48:99:0,144,2895	1/1:0,22:22:56.74:724,57,0	0/0:38,0:38:99:0,111,2098	0/0:24,0:24:60.19:0,60,1286	0/0:20,0:20:60.15:0,60,1186	0/0:25,0:25:69.19:0,69,1277	0/0:33,0:33:99:0,99,1859	0/0:7,0:7:15.02:0,15,252
chr10	85258272	.	TTGTTGTTGTTGTTGTTGC	T	448.15	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=5.017;DP=771;FS=0.000;HRun=0;HaplotypeScore=362.8696;InbreedingCoeff=0.5966;MQ=71.85;MQ0=1;MQRankSum=-5.460;QD=12.11;ReadPosRankSum=-0.537;VQSLOD=1.2047;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,175,13019	0/0:13,0:13:33.11:0,33,2560	0/0:37,0:33:60.17:0,60,3146	0/0:30,0:26:43.96:0,44,2415	0/0:26,0:26:63.18:0,63,4514	0/0:30,0:30:78.27:0,78,6060	0/0:20,0:20:51.18:0,51,4021	0/0:39,0:39:72.24:0,72,4675	0/0:30,0:30:69.24:0,69,3851	0/0:33,0:33:81.27:0,81,5917	0/0:17,0:17:39.10:0,39,2617	0/0:21,0:21:48.16:0,48,2642	0/0:29,0:29:53.79:0,54,2901	0/0:20,0:20:45.15:0,45,2528	0/0:29,0:30:84.29:0,84,6480	0/1:25,0:25:19.27:19,0,180	0/0:22,0:22:51.18:0,51,3888	1/1:7,5:12:11.97:527,12,0	0/0:31,0:30:69.24:0,69,4820	0/0:24,0:24:60.21:0,60,4979	0/0:49,0:49:99:0,132,9727	0/0:25,0:25:60.21:0,60,3195	0/0:39,0:39:90.31:0,90,6916	0/0:23,0:23:63.22:0,63,4944	0/0:20,0:20:48.16:0,48,4039	0/0:26,0:26:63.22:0,63,5147	0/0:34,0:34:81.28:0,81,5628	0/0:5,0:5:9.03:0,9,772
chr10	85258278	.	TTGTTGTTGTTGC	T	907.81	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.618;DP=765;FS=1.123;HRun=0;HaplotypeScore=263.9458;InbreedingCoeff=0.9523;MQ=67.37;MQ0=1;MQRankSum=-4.817;QD=23.89;ReadPosRankSum=-0.620;VQSLOD=1.9752;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,163,8896	0/0:13,0:13:30.10:0,30,1711	0/0:33,0:27:54.15:0,54,2071	0/0:28,0:24:39.03:0,39,1770	0/0:26,0:26:67.42:0,67,3206	0/0:31,0:31:81.26:0,81,4280	0/0:19,0:19:51.16:0,51,2801	0/0:34,0:34:69.24:0,69,3450	0/0:31,0:31:72.25:0,72,2147	0/0:32,0:32:78.27:0,78,4072	0/0:18,0:18:42.13:0,42,1933	0/0:20,0:20:48.16:0,48,1377	0/0:30,0:30:53.77:0,54,1562	0/0:21,0:21:48.16:0,48,1402	0/0:30,0:30:84.27:0,84,4434	1/1:9,18:27:21.07:756,21,0	0/0:22,0:22:51.17:0,51,2768	1/1:11,0:11:12.04:267,12,0	0/0:30,0:29:69.23:0,69,3336	0/0:24,0:24:63.22:0,63,3583	0/0:50,0:50:99:0,129,6681	0/0:25,0:25:46.22:0,46,1837	0/0:40,0:40:93.32:0,93,5032	0/0:22,0:22:60.21:0,60,3322	0/0:18,0:18:48.16:0,48,2806	0/0:29,0:29:72.25:0,72,4098	0/0:34,0:34:81.24:0,81,3942	0/0:5,0:5:9.03:0,9,540
chr10	85258287	.	TTGC	T	4692.05	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.817;DP=739;FS=4.308;HRun=0;HaplotypeScore=111.4618;InbreedingCoeff=0.9876;MQ=62.48;MQ0=1;MQRankSum=-2.183;QD=30.08;ReadPosRankSum=3.551;VQSLOD=5.1623;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,180,3430	0/0:12,0:12:33.07:0,33,627	0/0:32,0:25:56.12:0,56,850	0/0:27,0:22:46.19:0,46,805	0/0:25,0:25:51.81:0,52,1095	0/0:30,0:30:87.19:0,87,1626	0/0:19,0:19:57.11:0,57,1058	0/0:29,0:29:75.15:0,75,1119	1/1:31,1:32:79.45:1136,79,0	0/0:29,0:29:79.78:0,80,1458	0/0:16,0:16:28.15:0,28,686	1/1:22,1:23:63.12:883,63,0	1/1:29,1:30:60.17:863,60,0	1/1:20,0:20:54.15:807,54,0	0/0:33,0:33:79.84:0,80,1702	1/1:22,0:22:20.92:163,21,0	0/0:23,0:23:44.30:0,44,1070	1/1:5,0:5:11.86:80,12,0	0/0:30,0:29:81.07:0,81,1298	0/0:25,0:25:75.17:0,75,1418	0/0:52,0:52:99:0,144,2549	1/1:23,1:24:58.35:760,58,0	0/0:34,0:34:96.14:0,96,1758	0/0:24,0:24:66.15:0,66,1272	0/0:17,0:17:51.15:0,51,1084	0/0:28,0:28:81.21:0,81,1545	0/0:31,0:31:87.06:0,87,1495	0/0:4,0:4:12:0,12,227
chr10	85258865	.	GGTGT	G	1150.39	PASS	AB=0.940;AC=28;AF=0.560;AN=50;BaseQRankSum=1.599;DP=659;FS=12.168;HRun=0;HaplotypeScore=134.1103;InbreedingCoeff=0.1926;MQ=59.51;MQ0=15;MQRankSum=-0.692;QD=2.99;ReadPosRankSum=0.655;VQSLOD=1.7912;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:2.79:0,3,46	0/0:13,0:14:5.74:0,6,38	./.	./.	0/0:21,0:20:3.01:0,3,65	0/0:21,0:20:12.04:0,12,203	1/1:16,0:18:3:27,3,0	0/0:29,0:25:2.29:0,2,6	1/1:20,0:22:3:28,3,0	0/1:26,1:26:14.73:217,0,15	1/1:16,2:18:3.01:45,3,0	1/1:20,0:22:3:28,3,0	1/1:9,0:10:3:28,3,0	1/1:19,0:25:3:28,3,0	1/1:22,3:25:9.03:139,9,0	0/1:17,1:19:20.11:108,0,20	0/1:31,10:39:57.25:230,0,57	0/1:19,0:19:9.86:47,0,10	./.	0/1:29,1:30:3.49:57,0,3	0/1:34,0:32:68.28:78,0,68	1/1:16,0:16:2.87:21,3,0	0/0:19,0:19:17.73:0,18,355	0/0:32,0:33:38.83:0,39,731	0/0:23,0:22:17.70:0,18,296	1/1:21,3:24:6.02:93,6,0	1/1:17,5:22:3.01:37,3,0	1/1:10,0:10:6.02:93,6,0
chr10	85259266	.	CT	C	660.69	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.005;DP=628;FS=0.870;HRun=1;HaplotypeScore=68.6655;InbreedingCoeff=0.9605;MQ=76.78;MQ0=0;MQRankSum=-2.662;QD=31.46;ReadPosRankSum=0.920;VQSLOD=3.3319;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,2039	0/0:6,0:6:18.06:0,18,288	0/0:25,0:25:75.22:0,75,1134	0/0:21,0:21:63.16:0,63,948	0/0:24,0:24:72.25:0,72,1150	0/0:20,0:20:60.19:0,60,926	0/0:28,0:28:84.29:0,84,1342	0/0:23,0:23:69.21:0,69,1036	0/0:25,0:25:75.24:0,75,1174	0/0:19,0:19:57.19:0,57,910	0/0:14,0:14:39.13:0,39,621	0/0:25,0:25:72.25:0,72,1150	0/0:22,0:22:66.23:0,66,1053	0/0:20,0:20:60.20:0,60,958	0/0:24,0:24:60.20:0,60,958	1/1:1,20:21:12.40:747,12,0	0/0:41,0:41:99:0,123,1942	0/0:26,0:26:75.26:0,75,1193	0/0:16,0:16:48.12:0,48,730	0/0:13,0:13:33.11:0,33,526	0/0:42,0:42:99:0,123,1960	0/0:15,0:15:33.11:0,33,526	0/0:21,0:21:54.17:0,54,829	0/0:26,0:26:69.24:0,69,1102	0/0:17,0:17:51.17:0,51,813	0/0:16,0:16:48.16:0,48,765	0/0:25,0:25:69.24:0,69,1102	0/0:8,0:8:24.08:0,24,384
chr10	85259677	.	T	TG	624.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.859;DP=609;FS=3.562;HRun=0;HaplotypeScore=62.0677;InbreedingCoeff=0.9424;MQ=89.31;MQ0=0;MQRankSum=-0.527;QD=39.03;ReadPosRankSum=1.231;VQSLOD=4.1575;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,165,2190	0/0:9,0:9:27.09:0,27,378	0/0:27,0:27:78.07:0,78,992	0/0:19,0:18:50.62:0,51,602	0/0:14,0:14:39.13:0,39,542	0/0:13,0:13:39.13:0,39,541	0/0:44,0:44:99:0,132,1805	0/0:26,0:26:72.24:0,72,1006	0/0:28,0:28:84.27:0,84,1156	0/0:18,0:18:54.18:0,54,755	0/0:10,0:10:30.09:0,30,403	0/0:25,0:25:75.25:0,75,1044	0/0:26,0:26:78.25:0,78,1070	0/0:23,0:23:66.17:0,66,886	0/0:28,0:28:84.26:0,84,1141	1/1:0,16:16:45.15:719,45,0	0/0:26,0:26:75.25:0,75,1049	0/0:18,0:18:48.14:0,48,651	0/0:22,0:22:66.21:0,66,907	0/0:10,0:10:30.09:0,30,404	0/0:36,0:36:99:0,105,1437	0/0:17,0:17:48.15:0,48,654	0/0:10,0:10:30.10:0,30,419	0/0:44,0:44:99:0,132,1828	0/0:10,0:10:30.10:0,30,419	0/0:15,0:15:42.14:0,42,587	0/0:15,0:15:45.15:0,45,628	0/0:3,0:3:9.03:0,9,126
chr10	85261135	.	TA	T	933.12	PASS	AB=0.957;AC=15;AF=0.268;AN=56;BaseQRankSum=7.197;DP=424;FS=1.177;HRun=1;HaplotypeScore=70.7034;InbreedingCoeff=0.8758;MQ=51.58;MQ0=19;MQRankSum=-3.816;QD=8.48;ReadPosRankSum=0.342;VQSLOD=0.9537;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:75.15:0,75,994	1/1:5,3:8:9.60:106,10,0	0/0:12,1:6:18.05:0,18,229	0/0:10,0:4:8.71:0,9,61	0/0:11,0:11:30.05:0,30,373	0/0:20,0:20:51.08:0,51,686	1/1:2,7:9:21.05:274,21,0	0/0:25,0:23:50.76:0,51,412	0/0:19,0:18:48.02:0,48,565	1/1:15,3:16:17.73:150,18,0	1/1:7,2:9:12.04:116,12,0	0/0:7,0:7:21.06:0,21,275	0/0:14,0:14:38.93:0,39,512	0/0:16,0:16:45.02:0,45,544	1/1:8,5:13:19.67:171,20,0	1/1:10,0:10:15.39:48,15,0	1/1:14,7:18:32.07:256,32,0	0/0:28,0:24:60.15:0,60,797	0/0:18,0:16:15.37:0,15,291	0/0:16,0:16:34.97:0,35,306	0/0:4,0:4:5.89:0,6,55	0/0:11,0:11:33.01:0,33,386	0/0:13,0:13:39.08:0,39,521	0/0:18,0:17:35.73:0,36,481	0/0:16,0:15:39.09:0,39,483	0/0:21,0:19:39.71:0,40,345	0/1:21,1:20:3.29:3,0,166	0/0:4,0:4:10.68:0,11,55
chr10	85261139	.	TTTTTGGTTC	T	5191.75	PASS	AB=0.595;AC=22;AF=0.393;AN=56;BaseQRankSum=9.669;DP=419;FS=5.519;HRun=0;HaplotypeScore=108.9512;InbreedingCoeff=0.8512;MQ=50.55;MQ0=25;MQRankSum=-8.973;QD=29.33;ReadPosRankSum=-3.315;VQSLOD=3.5691;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:72.22:0,72,2943	1/1:8,0:8:15.05:353,15,0	0/0:9,0:5:12.03:0,12,358	0/0:10,0:4:2.05:0,2,94	0/0:12,0:12:30.10:0,30,1155	0/0:21,0:21:51.18:0,51,2206	0/0:9,0:8:21.07:0,21,667	1/1:12,13:23:29.52:695,30,0	0/0:18,0:15:33.09:0,33,1324	1/1:16,1:15:21.54:458,22,0	1/1:10,0:10:21.07:376,21,0	0/0:8,0:8:21.05:0,21,807	0/0:16,0:16:42.14:0,42,1621	0/0:13,0:13:36.12:0,36,1508	1/1:12,1:12:18.02:444,18,0	0/0:11,0:11:27.08:0,27,614	1/1:19,1:17:30.57:686,31,0	0/0:27,0:23:57.19:0,57,2422	1/1:17,0:15:24.02:377,24,0	1/1:4,11:15:21.03:376,21,0	0/1:1,3:4:0:0,0,0	0/0:9,0:9:18.03:0,18,607	0/0:13,0:13:39.13:0,39,1508	0/0:18,0:17:35.96:0,36,1265	0/0:16,0:15:26.95:0,27,965	1/1:14,7:17:33.08:752,33,0	0/1:8,13:19:25.09:411,0,25	1/1:1,5:6:9.03:265,9,0
chr10	85261140	.	TTTTGGTTC	T	4338.77	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=10.334;DP=418;FS=5.534;HRun=0;HaplotypeScore=104.2684;InbreedingCoeff=0.8509;MQ=50.18;MQ0=27;MQRankSum=-8.655;QD=24.65;ReadPosRankSum=-3.296;VQSLOD=3.1990;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:75.23:0,75,2727	1/1:5,3:8:15.03:260,15,0	0/0:9,0:4:12.03:0,12,325	0/0:10,0:4:1.95:0,2,86	0/0:12,0:12:30.09:0,30,1041	0/0:22,0:21:51.18:0,51,1980	0/0:9,0:8:21.07:0,21,583	1/1:23,1:22:29.63:572,30,0	0/0:19,0:15:33.09:0,33,1198	1/1:16,1:15:21.54:396,22,0	1/1:9,2:11:21.07:322,21,0	0/0:8,0:8:21.04:0,21,733	0/0:16,0:16:42.13:0,42,1483	0/0:13,0:13:36.12:0,36,1349	1/1:11,2:12:18.02:364,18,0	0/0:11,0:11:27.08:0,27,527	1/1:19,1:17:30.57:603,31,0	0/0:27,0:23:57.18:0,57,2193	1/1:17,0:15:24.02:360,24,0	1/1:14,1:15:21.03:332,21,0	0/1:4,0:4:0:0,0,0	0/0:8,0:8:18.02:0,18,572	0/0:14,0:14:42.14:0,42,1404	0/0:18,0:17:35.74:0,36,1156	0/0:15,0:14:25.30:0,25,880	1/1:21,0:17:33.08:630,33,0	0/1:21,0:19:22.03:302,0,22	1/1:5,0:5:9.03:199,9,0
chr10	85261141	.	TTTGGTTC	T	4104.78	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=10.383;DP=414;FS=7.434;HRun=0;HaplotypeScore=97.2202;InbreedingCoeff=0.8499;MQ=49.98;MQ0=28;MQRankSum=-9.380;QD=24.00;ReadPosRankSum=-2.891;VQSLOD=1.6124;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:75.22:0,75,2528	1/1:8,0:8:15.03:247,15,0	0/0:9,0:4:11.25:0,11,281	0/0:10,0:4:1.76:0,2,70	0/0:12,0:12:30.09:0,30,996	0/0:22,0:21:51.18:0,51,1797	0/0:10,0:9:24.08:0,24,604	1/1:24,0:22:29.87:510,30,0	0/0:18,0:14:33.09:0,33,1088	1/1:16,1:15:21.54:379,22,0	1/1:10,0:10:21.07:331,21,0	0/0:8,0:8:21.04:0,21,667	0/0:15,0:15:42.14:0,42,1400	0/0:13,0:13:36.12:0,36,1256	1/1:12,1:12:18.04:343,18,0	0/0:11,0:11:27.08:0,27,448	1/1:18,2:17:30.99:581,31,0	0/0:28,0:24:60.19:0,60,2059	1/1:14,1:13:24.02:344,24,0	1/1:15,0:15:21.03:320,21,0	0/1:4,0:4:0:0,0,0	0/0:8,0:8:18.01:0,18,532	0/0:14,0:14:42.14:0,42,1326	0/0:20,0:19:41.60:0,42,1219	0/0:14,0:13:24.32:0,24,815	1/1:21,0:17:33.08:594,33,0	0/1:19,0:16:20.25:274,0,20	1/1:5,0:5:9.03:181,9,0
chr10	85261142	.	TTGGTTC	T	3996.59	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=10.636;DP=408;FS=7.490;HRun=0;HaplotypeScore=89.8038;InbreedingCoeff=0.8442;MQ=49.99;MQ0=28;MQRankSum=-9.145;QD=24.08;ReadPosRankSum=-2.473;VQSLOD=2.1575;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:75.21:0,75,2280	1/1:8,0:8:15.05:259,15,0	0/0:8,0:4:11.25:0,11,256	0/0:9,0:4:0.29:0,0,60	0/0:12,0:12:30.08:0,30,892	0/0:24,0:23:57.20:0,57,1757	0/0:10,0:9:24.08:0,24,551	1/1:24,0:22:29.60:471,30,0	0/0:17,0:13:33.11:0,33,970	1/1:17,0:15:21.54:382,22,0	1/1:10,0:10:21.07:352,21,0	0/0:8,0:8:24.07:0,24,671	0/0:15,0:15:42.14:0,42,1268	0/0:13,0:13:36.12:0,36,1130	1/1:8,5:12:18.06:337,18,0	0/0:11,0:11:27.07:0,27,377	1/1:19,0:16:30.99:565,31,0	0/0:27,0:23:60.21:0,60,1852	1/1:12,1:11:21.02:327,21,0	1/1:14,0:14:21.03:309,21,0	0/1:4,0:4:0:0,0,0	0/0:8,0:8:18:0,18,490	0/0:14,0:14:42.14:0,42,1219	0/0:20,0:19:41.60:0,42,1118	0/0:14,0:13:24.03:0,24,742	1/1:20,1:17:33.08:576,33,0	0/1:18,0:15:18.49:257,0,18	1/1:5,0:5:9.03:164,9,0
chr10	85261143	.	TGGTTC	T	3937.14	PASS	AB=0.965;AC=23;AF=0.411;AN=56;BaseQRankSum=10.631;DP=371;FS=8.543;HRun=0;HaplotypeScore=76.0096;InbreedingCoeff=0.8417;MQ=51.16;MQ0=28;MQRankSum=-8.878;QD=28.32;ReadPosRankSum=-2.304;VQSLOD=2.1711;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:75.23:0,75,2060	1/1:3,3:6:15.05:303,15,0	0/0:9,0:4:11.25:0,11,233	0/1:9,0:4:0.38:0,0,62	0/0:12,0:12:30.07:0,30,816	0/0:24,0:23:57.20:0,57,1590	0/0:10,0:9:24.08:0,24,516	1/1:15,0:13:30.06:469,30,0	0/0:17,0:13:33.11:0,33,889	1/1:4,5:8:21.54:397,22,0	1/1:2,8:10:21.07:373,21,0	0/0:8,0:8:24.07:0,24,607	0/0:15,0:15:42:0,42,1141	0/0:13,0:13:36.12:0,36,1026	1/1:10,1:10:18.06:318,18,0	0/0:11,0:11:27:0,27,307	1/1:9,5:12:30.10:540,30,0	0/0:29,0:25:66.23:0,66,1774	1/1:11,0:10:21.02:292,21,0	1/1:12,0:12:21.03:297,21,0	0/1:3,0:3:0:0,0,0	0/0:6,0:6:18.06:0,18,461	0/0:14,0:14:42.14:0,42,1107	0/0:21,0:20:44.57:0,45,1099	0/0:13,0:12:24.19:0,24,683	1/1:13,2:12:33.08:538,33,0	0/1:15,2:14:17.67:263,0,18	1/1:5,0:5:9.03:146,9,0
chr10	85262327	.	TG	T	450.30	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.682;DP=563;FS=2.332;HRun=1;HaplotypeScore=55.1069;InbreedingCoeff=0.9988;MQ=80.91;MQ0=0;MQRankSum=-2.662;QD=32.16;ReadPosRankSum=2.485;VQSLOD=3.4127;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1580	0/0:11,0:11:30.09:0,30,435	0/0:18,0:18:51.17:0,51,645	0/0:14,0:14:38.89:0,39,485	0/0:25,0:25:75.19:0,75,1059	0/0:20,0:20:60.20:0,60,916	0/0:28,0:28:84.25:0,84,1240	0/0:32,0:32:96.30:0,96,1412	0/0:14,0:14:42.14:0,42,642	0/0:25,0:25:69.22:0,69,1021	0/0:14,0:14:42.13:0,42,616	0/0:23,0:23:69.22:0,69,1027	0/0:16,0:16:48.11:0,48,667	0/0:14,0:14:42.11:0,42,599	0/0:11,0:11:33.06:0,33,478	1/1:0,14:14:39.13:545,39,0	0/0:31,0:31:93.28:0,93,1378	0/0:17,0:17:51.17:0,51,780	0/0:23,0:23:69.23:0,69,1036	0/0:23,0:23:69.13:0,69,1013	0/0:14,0:14:42.13:0,42,620	0/0:18,0:18:51.14:0,51,735	0/0:13,0:13:39.13:0,39,596	0/0:21,0:21:63.18:0,63,919	0/0:21,0:21:57.11:0,57,763	0/0:30,0:30:90.29:0,90,1357	0/0:25,0:24:75.22:0,75,1103	0/0:13,0:13:36.07:0,36,504
chr10	85262696	.	CTCTCTG	C	856.38	PASS	AB=1.000;AC=16;AF=0.296;AN=54;BaseQRankSum=3.499;DP=574;FS=1.726;HRun=0;HaplotypeScore=160.9007;InbreedingCoeff=0.3523;MQ=53.41;MQ0=39;MQRankSum=-0.449;QD=4.14;ReadPosRankSum=-2.041;VQSLOD=2.2810;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/1:7,0:7:7.03:24,0,7	0/0:23,0:7:2.25:0,2,23	0/0:35,0:12:1.51:0,2,19	0/0:18,0:18:30.10:0,30,782	0/0:32,0:30:48.33:0,48,1389	0/0:18,0:15:25.29:0,25,263	0/1:33,0:31:99:153,0,282	1/1:16,0:15:20.21:153,20,0	0/0:22,0:17:1:0,1,153	0/0:8,0:7:6.93:0,7,111	1/1:16,0:13:24.44:200,24,0	0/1:20,0:17:0.19:104,0,0	1/1:17,0:17:21:159,21,0	0/1:20,0:19:9.14:9,0,29	1/1:18,0:17:0.94:11,1,0	0/1:23,0:23:21.97:22,0,151	0/0:11,0:9:24.11:0,24,457	0/1:28,0:26:82.07:82,0,286	0/0:16,0:15:9:0,9,86	0/0:27,0:21:14.95:0,15,138	1/1:9,0:7:11.93:106,12,0	0/0:16,0:14:4.88:0,5,427	0/0:29,0:26:71.76:0,72,1894	0/0:21,0:21:26.71:0,27,506	0/0:24,0:23:6.25:0,6,356	0/0:18,0:18:31.06:0,31,259	0/0:7,0:7:12.42:0,12,87
chr10	85262702	.	GTC	G	149.71	PASS	AB=0.941;AC=18;AF=0.333;AN=54;BaseQRankSum=1.893;DP=529;FS=17.775;HRun=0;HaplotypeScore=129.7264;InbreedingCoeff=0.1577;MQ=47.02;MQ0=38;MQRankSum=-3.540;QD=0.64;ReadPosRankSum=-2.748;VQSLOD=0.3050;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:7:7.33:0,7,26	1/1:8,0:2:0.47:1,0,0	0/0:22,0:4:0.47:0,0,1	0/0:16,0:16:27.06:0,27,405	0/0:33,0:31:50.77:0,51,661	1/1:17,4:18:11.62:108,12,0	0/1:29,1:27:7.74:8,0,93	0/1:16,0:15:0.21:0,0,1	0/1:18,3:16:47.28:48,0,47	0/0:7,0:6:3.84:0,4,12	1/1:16,0:13:0.43:1,0,0	1/1:18,0:15:4.19:21,4,0	1/1:18,0:18:0.10:6,0,0	0/0:12,2:17:7.50:0,8,30	0/0:19,0:18:8.55:0,9,61	0/1:15,3:20:20.46:38,0,20	0/0:14,0:12:26.19:0,26,325	0/1:26,0:24:13.07:13,0,85	0/0:14,1:14:2.94:0,3,18	0/0:23,3:19:2.22:0,2,7	0/1:10,0:8:1.19:1,0,40	0/0:14,0:12:22.89:0,23,327	0/0:30,0:27:74.82:0,75,1113	0/0:22,0:21:26.71:0,27,349	0/1:20,3:22:29.78:30,0,109	0/0:17,0:18:17.98:0,18,107	0/1:6,0:6:8.59:9,0,46
chr10	85262706	.	C	CTG	4634.37	PASS	AB=0.719;AC=19;AF=0.339;AN=56;BaseQRankSum=0.641;DP=515;FS=4.282;HRun=0;HaplotypeScore=115.9141;InbreedingCoeff=0.4087;MQ=43.57;MQ0=37;MQRankSum=-2.432;QD=21.46;ReadPosRankSum=3.003;VQSLOD=5.1100;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:5.99:0,6,48	1/1:2,5:7:14.09:194,14,0	0/0:5,0:1:1.82:0,2,5	0/0:15,0:1:0.47:0,0,1	0/0:17,0:17:33.05:0,33,417	0/0:31,0:29:59.06:0,59,723	0/0:21,0:18:20.16:0,20,181	0/1:11,21:29:13.56:1092,0,14	0/0:16,0:15:23.09:0,23,151	1/1:13,7:15:3.80:549,4,0	1/1:4,2:5:9.01:140,9,0	0/0:13,0:10:20.96:0,21,170	0/0:20,0:17:25.01:0,25,177	0/1:16,0:16:26.68:27,0,54	1/1:12,7:18:12.03:231,12,0	0/0:17,0:16:12:0,12,76	1/1:14,5:19:5.66:219,6,0	0/0:14,0:12:33.08:0,33,425	0/1:10,18:25:17.07:787,0,17	0/0:3,11:14:2.88:0,3,15	1/1:19,4:16:3.01:58,3,0	0/0:9,0:7:3.49:0,3,40	0/0:15,0:13:24.07:0,24,337	0/0:30,0:27:75.20:0,75,1052	0/0:21,0:20:23.92:0,24,334	0/1:8,13:22:47.56:666,0,48	1/1:6,10:16:10.46:518,10,0	0/1:5,2:7:42.22:153,0,42
chr10	85262710	.	CTG	C	1785.04	PASS	AB=0.987;AC=33;AF=0.660;AN=50;BaseQRankSum=7.718;DP=494;FS=21.862;HRun=0;HaplotypeScore=127.9233;InbreedingCoeff=0.2614;MQ=43.20;MQ0=34;MQRankSum=-1.428;QD=4.94;ReadPosRankSum=-1.989;VQSLOD=1.4402;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:40:6.32:6,0,17	1/1:7,0:7:8.50:32,9,0	./.	./.	0/0:16,0:15:3.11:0,3,357	0/0:26,0:24:9.01:0,9,537	0/1:21,0:18:23.83:53,0,24	0/1:32,0:29:20.57:225,0,21	1/1:15,2:16:26.66:209,27,0	1/1:19,0:14:26.01:126,26,0	1/1:5,0:4:4.74:16,5,0	1/1:13,0:10:20.98:175,21,0	1/1:18,1:17:15.51:189,16,0	1/1:16,1:17:20.90:170,21,0	0/1:19,1:19:3.32:14,0,3	0/1:16,0:15:14.95:15,0,63	1/1:17,0:17:2.32:52,2,0	0/1:14,0:12:17.86:18,0,155	1/1:25,0:22:28.93:276,29,0	./.	1/1:24,0:17:2.60:10,3,0	1/1:9,1:8:9.93:81,10,0	0/0:15,0:13:10.93:0,11,304	0/0:29,0:26:48.99:0,49,1035	0/0:20,0:19:26.59:0,27,327	0/1:20,1:20:22.01:156,0,22	1/1:16,0:16:7.60:60,8,0	1/1:6,1:7:4.24:68,4,0
chr10	85262712	.	GTC	G	168.32	PASS	AB=0.991;AC=21;AF=0.438;AN=48;BaseQRankSum=6.236;DP=488;FS=9.664;HRun=0;HaplotypeScore=134.4217;InbreedingCoeff=0.3060;MQ=43.33;MQ0=33;MQRankSum=1.471;QD=0.67;ReadPosRankSum=0.831;VQSLOD=1.7861;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:41:5.96:6,0,77	1/1:7,1:8:3.89:36,4,0	./.	./.	0/0:15,0:14:20.93:0,21,229	0/0:26,0:24:25.02:0,25,483	0/0:22,0:19:14.30:0,14,120	0/0:31,0:28:23.27:0,23,203	0/1:16,0:15:0.92:2,0,1	0/1:18,0:13:1.54:52,0,2	1/1:5,0:4:4.46:19,4,0	1/1:13,0:10:0.47:1,0,0	0/1:19,0:17:1.72:16,0,2	1/1:18,0:18:3.55:13,4,0	1/1:18,1:18:10.26:52,10,0	0/0:17,0:16:11.97:0,12,136	1/1:15,0:16:12.51:81,13,0	0/1:15,0:13:12.97:13,0,89	0/1:22,0:21:6.64:7,0,31	./.	./.	0/1:10,0:8:2.24:2,0,35	0/0:15,0:13:20.80:0,21,282	0/0:28,0:25:62.27:0,62,815	0/0:20,0:19:20.96:0,21,287	0/1:20,2:21:2.97:3,0,98	0/0:17,0:17:8.61:0,9,48	0/1:8,0:7:12.42:12,0,42
chr10	85262722	.	CTCTG	C	1822.96	PASS	AB=0.987;AC=30;AF=0.600;AN=50;BaseQRankSum=4.630;DP=485;FS=9.531;HRun=0;HaplotypeScore=135.1052;InbreedingCoeff=-0.0021;MQ=42.38;MQ0=35;MQRankSum=-1.100;QD=4.80;ReadPosRankSum=-2.364;VQSLOD=1.3136;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:40:22.71:25,0,23	1/1:7,1:8:14.93:138,15,0	./.	./.	0/1:16,0:15:8.95:9,0,83	0/1:22,0:19:49.06:49,0,446	0/0:26,0:23:32.98:0,33,232	0/1:28,0:25:79.04:171,0,79	1/1:19,0:18:17.99:163,18,0	0/1:21,0:16:71.72:85,0,72	0/1:8,0:6:4.88:18,0,5	1/1:10,0:7:11.99:101,12,0	1/1:15,0:13:21.85:146,22,0	1/1:20,0:20:16.26:164,16,0	1/1:23,0:21:11.82:89,12,0	0/1:16,0:15:18.28:18,0,51	0/1:16,1:17:38.51:59,0,39	0/1:15,0:13:33.17:125,0,33	0/1:18,0:16:2.92:127,0,3	./.	1/1:20,1:14:3:25,3,0	1/1:11,0:9:9.45:101,9,0	0/0:14,0:12:20.88:0,21,247	0/0:27,0:25:24.68:0,25,702	0/0:22,0:20:8.46:0,8,321	0/1:23,0:20:17.51:177,0,18	1/1:17,2:18:17.58:140,18,0	0/1:8,1:7:23.11:60,0,23
chr10	85262724	.	CTG	C	2126.85	PASS	AB=0.993;AC=33;AF=0.660;AN=50;BaseQRankSum=4.312;DP=483;FS=6.917;HRun=0;HaplotypeScore=121.0627;InbreedingCoeff=0.1195;MQ=42.14;MQ0=34;MQRankSum=-0.589;QD=5.61;ReadPosRankSum=-2.489;VQSLOD=1.6498;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:40:6.13:96,6,0	1/1:9,0:9:13.70:91,14,0	./.	./.	0/1:15,0:14:17.55:18,0,59	0/1:22,0:19:11.40:11,0,353	0/0:26,0:23:38.39:0,38,287	0/1:27,0:25:82.81:193,0,83	1/1:20,1:20:22.40:214,22,0	0/1:20,0:15:62.36:84,0,62	0/1:8,0:6:4.87:18,0,5	1/1:11,0:7:11.99:100,12,0	1/1:14,1:13:22.12:165,22,0	1/1:19,1:20:18.41:151,18,0	1/1:20,1:19:11.83:89,12,0	0/1:14,1:14:25.38:34,0,25	0/1:18,0:18:22.07:54,0,22	1/1:16,0:14:4.82:212,5,0	0/1:20,0:18:1.42:191,0,1	./.	1/1:19,0:13:3:25,3,0	1/1:10,0:8:9.87:82,10,0	0/0:14,0:12:20.88:0,21,214	0/0:26,0:24:30.77:0,31,478	0/0:22,0:20:0.90:0,1,225	1/1:22,0:19:6.15:195,6,0	1/1:19,1:19:25.59:174,26,0	0/1:9,0:7:24.34:92,0,24
chr10	85262730	.	C	CTG	91.05	PASS	AB=0.969;AC=8;AF=0.154;AN=52;BaseQRankSum=0.500;DP=483;FS=0.000;HRun=0;HaplotypeScore=128.4919;InbreedingCoeff=-0.0596;MQ=41.34;MQ0=36;MQRankSum=-4.445;QD=0.71;ReadPosRankSum=-0.026;VQSLOD=2.4439;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:1.33:0,1,72	0/0:8,0:8:8.17:0,8,45	./.	./.	0/0:12,0:11:13.96:0,14,99	0/0:22,0:19:39.31:0,39,402	0/0:23,0:20:32.77:0,33,403	0/1:21,0:19:82.47:82,0,117	0/0:21,0:20:25.55:0,26,179	0/1:20,1:16:46.40:81,0,46	0/0:8,0:6:2.99:0,3,25	0/0:11,0:7:11.88:0,12,87	0/0:17,0:16:1.42:0,1,73	0/0:20,0:20:20.41:0,20,148	0/1:19,1:18:4.35:4,0,41	0/0:15,0:14:19.62:0,20,174	0/1:18,2:20:21.48:21,0,49	0/0:16,0:14:33.35:0,33,314	0/0:23,0:21:27.27:0,27,267	1/1:16,0:15:0.47:1,0,0	0/1:22,0:16:0.07:0,0,20	0/0:11,0:9:8.34:0,8,53	0/0:15,0:13:5.98:0,6,187	0/0:24,0:21:52.58:0,53,567	0/0:22,0:20:10.31:0,10,297	0/0:27,0:24:45.44:0,45,390	0/0:19,0:18:23.91:0,24,191	0/1:9,0:7:0.27:0,0,94
chr10	85262758	.	C	CTG	654.43	PASS	AB=0.833;AC=16;AF=0.286;AN=56;BaseQRankSum=10.635;DP=548;FS=5.662;HRun=0;HaplotypeScore=124.0382;InbreedingCoeff=0.5073;MQ=53.14;MQ0=25;MQRankSum=-8.513;QD=3.52;ReadPosRankSum=1.189;VQSLOD=2.3428;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:44.91:0,45,398	1/1:6,5:11:7.86:60,8,0	0/0:23,0:17:47.85:0,48,415	0/0:24,0:19:43.77:0,44,427	0/0:12,0:12:25.77:0,26,196	0/0:27,0:25:59.98:0,60,568	0/0:23,0:22:42.08:0,42,485	0/0:19,0:18:8.78:0,9,221	0/0:23,0:22:37.75:0,38,293	0/1:14,11:22:99:163,0,115	0/0:6,1:7:2.93:0,3,18	0/0:14,0:10:23.80:0,24,176	0/0:21,0:20:8.25:0,8,178	0/0:22,0:22:29.83:0,30,234	0/1:10,12:20:6.64:54,0,7	0/0:16,0:15:30.20:0,30,266	1/1:20,0:20:11.13:137,11,0	0/0:18,0:16:33.44:0,33,323	0/1:21,0:19:99:114,0,126	1/1:17,0:16:8.98:63,9,0	1/1:18,0:14:1.82:5,2,0	0/0:7,0:6:11.94:0,12,92	0/0:19,0:17:36.86:0,37,356	0/0:26,0:23:63:0,63,660	0/0:24,0:22:38.82:0,39,430	0/1:25,0:23:99:125,0,148	1/1:20,0:19:4.63:16,5,0	1/1:6,0:5:8.19:86,8,0
chr10	85262764	.	C	CTGTGTGTG	4413.90	PASS	AB=1.000;AC=21;AF=0.389;AN=54;BaseQRankSum=4.861;DP=530;FS=3.451;HRun=0;HaplotypeScore=154.3779;InbreedingCoeff=0.8555;MQ=63.87;MQ0=20;MQRankSum=-8.991;QD=22.87;ReadPosRankSum=0.462;VQSLOD=4.2363;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:60.05:0,60,1410	1/1:11,1:12:11.15:271,11,0	0/0:29,0:23:57.16:0,57,1277	0/0:27,0:22:61.72:0,62,1417	0/0:14,0:14:30.10:0,30,772	0/0:22,0:21:57.92:0,58,1290	0/0:22,0:21:51.16:0,51,1363	1/1:20,0:19:16.79:293,17,0	0/0:24,0:23:48.06:0,48,1224	1/1:23,0:20:25.01:701,25,0	1/1:7,0:7:3.01:49,3,0	0/0:12,0:9:24.08:0,24,604	0/0:16,0:15:36.12:0,36,901	0/0:18,0:18:30.10:0,30,773	1/1:23,0:21:11.89:225,12,0	0/0:14,0:14:30.10:0,30,834	1/1:20,0:20:30.47:635,30,0	0/0:17,0:16:42.09:0,42,994	1/1:19,0:17:27.14:746,27,0	1/1:17,0:16:12:271,12,0	./.	0/0:7,0:6:12.04:0,12,303	0/0:19,0:17:36.12:0,36,983	0/0:26,0:24:36.07:0,36,1325	0/0:25,0:24:48.14:0,48,1110	0/1:24,0:22:49.64:711,0,50	1/1:2,17:21:6.49:154,6,0	1/1:6,0:5:15.05:358,15,0
chr10	85262766	.	C	CTGTGTGTGTG	8066.72	PASS	AC=22;AF=0.407;AN=54;BaseQRankSum=1.723;DP=553;FS=0.000;HRun=0;HaplotypeScore=183.4029;InbreedingCoeff=0.9232;MQ=65.13;MQ0=16;MQRankSum=-11.920;QD=38.05;ReadPosRankSum=-2.651;VQSLOD=3.9043;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:61.05:0,61,1642	1/1:14,0:14:13.42:323,13,0	0/0:30,0:24:57.18:0,57,1456	0/0:29,0:24:64.79:0,65,1596	0/0:15,0:15:30.05:0,30,905	0/0:22,0:21:48.16:0,48,1428	0/0:22,0:21:51.18:0,51,1510	1/1:24,0:24:66.10:1363,66,0	0/0:24,0:23:48.08:0,48,1420	1/1:25,0:23:51.65:1339,52,0	1/1:7,0:7:3.01:68,3,0	0/0:11,0:10:3.10:0,3,700	0/0:16,0:15:36.12:0,36,1051	0/0:19,0:19:30.10:0,30,858	1/1:23,0:21:11.91:302,12,0	0/0:14,0:14:30.10:0,30,886	1/1:20,1:21:33.06:819,33,0	0/0:17,0:16:42.09:0,42,1124	1/1:23,0:21:47.97:1387,48,0	1/1:21,0:20:11.56:339,12,0	./.	0/0:7,0:6:15.04:0,15,374	0/0:19,0:17:35.95:0,36,1067	0/0:26,0:24:51.17:0,51,1482	0/0:24,0:23:45.15:0,45,1274	1/1:25,0:23:48.12:1403,48,0	1/1:23,0:22:9.50:297,10,0	1/1:6,0:5:15.05:426,15,0
chr10	85263522	.	G	GGA	13805.08	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-17.219;DP=726;FS=4.250;HRun=0;HaplotypeScore=86.2347;InbreedingCoeff=0.9989;MQ=91.78;MQ0=0;MQRankSum=-1.777;QD=46.17;ReadPosRankSum=0.413;VQSLOD=5.6956;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1402	1/1:1,6:7:18.06:319,18,0	0/0:28,0:28:68.72:0,69,870	0/0:36,0:36:81.07:0,81,1060	0/0:28,0:28:60.67:0,61,821	0/0:22,0:22:63.21:0,63,866	0/0:38,0:38:99:0,108,1444	1/1:6,18:25:57.18:984,57,0	0/0:22,0:22:63.21:0,63,857	1/1:4,20:24:63.22:1116,63,0	1/1:2,15:17:42.14:745,42,0	0/0:27,0:27:72.24:0,72,988	0/0:23,0:23:63.20:0,63,850	0/0:17,0:17:48.13:0,48,640	1/1:0,29:29:81.28:1437,81,0	0/0:25,0:25:63.20:0,63,849	1/1:3,26:32:71.78:1277,72,0	0/0:23,0:23:57.19:0,57,783	1/1:2,18:20:57.15:960,57,0	1/1:0,19:19:48.16:851,48,0	1/1:2,46:48:99:2396,135,0	0/0:34,0:34:87.29:0,87,1193	0/0:24,0:24:66.22:0,66,904	0/0:21,0:21:60.20:0,60,824	0/0:22,0:22:60.11:0,60,782	1/1:2,24:27:75.26:1326,75,0	1/1:1,28:29:78.27:1384,78,0	1/1:0,20:20:57.20:1010,57,0
chr10	85264875	.	CATCT	C	169.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.069;DP=483;FS=8.962;HRun=0;HaplotypeScore=96.1613;InbreedingCoeff=0.6646;MQ=69.08;MQ0=0;MQRankSum=-2.136;QD=8.91;ReadPosRankSum=-1.309;VQSLOD=1.8497;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:63.19:0,63,1491	0/0:10,0:10:11.96:0,12,195	0/0:16,0:16:48.16:0,48,1139	0/0:20,0:20:47.33:0,47,1178	0/0:30,0:30:90.31:0,90,2248	0/0:22,0:22:57.18:0,57,1404	1/1:6,13:19:17.89:259,18,0	0/0:25,0:25:60.20:0,60,1474	0/0:8,0:8:21.07:0,21,542	0/0:41,0:41:99:0,108,2721	0/0:14,0:14:36.12:0,36,925	0/0:8,0:8:18.06:0,18,464	0/0:11,0:11:30.10:0,30,774	0/0:3,0:3:9.03:0,9,205	0/0:5,0:5:3.01:0,3,77	0/0:9,0:9:21.07:0,21,542	0/0:30,0:30:33.11:0,33,838	0/0:5,0:5:15.05:0,15,387	0/0:20,0:20:54.16:0,54,1244	0/0:18,0:18:45.15:0,45,1111	0/0:9,0:9:3.01:0,3,77	0/0:10,0:10:30.09:0,30,694	0/0:14,0:14:39.12:0,39,953	0/0:18,0:18:54.19:0,54,1390	0/0:23,0:23:60.21:0,60,1548	0/0:23,0:23:57.20:0,57,1470	0/0:17,0:17:42.09:0,42,923	0/0:29,0:29:36.12:0,36,804
chr10	85264908	.	AGT	A	3209.35	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=5.999;DP=417;FS=2.099;HRun=0;HaplotypeScore=84.1649;InbreedingCoeff=0.8657;MQ=59.52;MQ0=7;MQRankSum=0.356;QD=14.52;ReadPosRankSum=-0.775;VQSLOD=3.4264;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.09:0,54,691	1/1:0,6:6:3.01:42,3,0	0/0:9,0:8:8.25:0,8,94	0/0:10,0:8:7.60:0,8,127	0/0:31,0:30:81.09:0,81,907	0/0:19,0:18:44.87:0,45,538	0/1:6,0:6:0:0,0,0	1/1:15,0:15:35.71:297,36,0	0/0:8,0:7:18.03:0,18,217	1/1:3,33:36:91.77:901,92,0	1/1:13,1:14:14.94:127,15,0	0/0:9,0:9:20.71:0,21,222	0/0:11,0:11:28.64:0,29,292	0/0:6,0:6:9:0,9,93	1/1:0,9:9:5.87:54,6,0	1/1:4,0:4:9.75:44,10,0	1/1:3,22:26:20.97:204,21,0	0/0:8,0:8:23.95:0,24,255	1/1:5,15:21:48.01:530,48,0	1/1:1,16:18:13.50:106,14,0	1/1:1,14:14:2.96:19,3,0	0/0:10,0:10:27.06:0,27,370	0/0:13,0:13:30.03:0,30,359	0/0:24,0:23:51.10:0,51,639	0/0:17,0:17:27.98:0,28,461	1/1:1,17:19:53.86:602,54,0	1/1:11,2:13:26.13:343,26,0	1/1:0,19:19:12.04:153,12,0
chr10	85264927	.	GCGCACACACACACACACACACACACACACACACA	G	4584.36	PASS	AB=1.000;AC=25;AF=0.463;AN=54;BaseQRankSum=5.082;DP=379;FS=0.000;HRun=0;HaplotypeScore=239.9889;InbreedingCoeff=0.7334;MQ=50.75;MQ0=29;MQRankSum=-3.767;QD=27.62;ReadPosRankSum=-0.776;VQSLOD=3.5324;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:47.90:0,48,3972	1/1:5,0:4:3.01:75,3,0	0/0:2,0:1:0:0,0,0	./.	0/0:25,0:24:50.95:0,51,3095	0/0:17,0:16:32.94:0,33,1767	0/0:9,0:7:2.84:0,3,331	1/1:15,0:15:21.04:148,21,0	0/0:11,0:9:11.97:0,12,426	1/1:21,1:22:50.88:1180,51,0	1/1:3,11:13:6.02:71,6,0	0/0:11,0:10:15.44:0,15,1137	0/0:16,0:15:20.24:0,20,684	0/0:6,0:5:3.01:0,3,48	1/1:7,0:7:7.93:402,8,0	0/1:2,0:2:13.97:193,0,14	1/1:22,0:20:25.22:364,25,0	0/0:11,0:10:30.03:0,30,2348	1/1:16,0:14:21.86:339,22,0	1/1:12,0:12:20.97:453,21,0	1/1:18,0:12:4.30:19,4,0	0/0:11,0:11:21.03:0,21,1246	0/0:12,0:12:0.33:0,0,1079	0/0:28,0:25:41.95:0,42,2352	0/0:26,0:26:54.68:0,55,3978	1/1:13,0:12:34.11:335,34,0	1/1:8,0:8:23.92:421,24,0	1/1:11,0:10:11.40:584,11,0
chr10	85264929	.	GCACA	G	831.67	PASS	AB=0.920;AC=18;AF=0.600;AN=30;BaseQRankSum=0.957;DP=379;FS=6.515;HRun=0;HaplotypeScore=102.9202;InbreedingCoeff=0.3080;MQ=50.32;MQ0=32;MQRankSum=-1.879;QD=5.23;ReadPosRankSum=-1.339;VQSLOD=1.4216;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:24:21.01:0,21,315	./.	./.	./.	1/1:25,0:23:6.57:90,7,0	0/0:14,0:16:2.99:0,3,24	0/0:9,0:7:3.01:0,3,40	./.	./.	1/1:20,0:22:9.01:83,9,0	./.	0/1:10,0:10:15.34:22,0,15	1/1:11,0:15:2.56:27,3,0	./.	1/1:6,0:6:2.58:18,3,0	1/1:1,0:2:3:28,3,0	./.	0/1:11,1:11:23.37:167,0,23	./.	./.	./.	0/0:9,0:12:5.48:0,5,32	0/0:10,5:15:5.98:0,6,46	1/1:18,11:26:0.99:86,1,0	1/1:24,0:24:12.24:373,12,0	./.	./.	1/1:9,0:10:6.01:56,6,0
chr10	85265479	.	TA	T	317.69	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=4.788;DP=548;FS=10.836;HRun=9;HaplotypeScore=87.3466;InbreedingCoeff=0.7273;MQ=77.17;MQ0=1;MQRankSum=0.019;QD=12.71;ReadPosRankSum=2.773;VQSLOD=2.3566;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,1508	0/0:11,0:11:27.08:0,27,312	0/0:29,0:27:42.07:0,42,447	0/1:10,0:9:3.54:4,0,48	0/0:27,1:28:53.75:0,54,853	0/0:22,0:22:63.19:0,63,727	0/0:14,0:14:42.12:0,42,485	0/0:22,0:22:63.17:0,63,710	0/0:17,0:17:45.13:0,45,517	0/0:31,0:31:81.24:0,81,929	0/0:18,0:18:48.14:0,48,547	0/0:9,0:9:27.08:0,27,312	0/0:12,0:12:33.10:0,33,381	0/0:14,0:14:36.11:0,36,415	0/0:26,0:26:75.22:0,75,866	1/1:0,15:15:45.02:412,45,0	0/0:15,0:15:39.12:0,39,450	0/0:12,0:12:27.08:0,27,310	0/0:15,0:15:42.12:0,42,485	0/0:27,0:27:75.21:0,75,857	0/0:18,0:18:51.15:0,51,588	0/0:21,0:21:57.16:0,57,649	0/0:22,0:22:54.14:0,54,612	0/0:21,0:21:60.18:0,60,692	0/0:19,0:19:51.12:0,51,568	0/0:25,0:25:69.20:0,69,789	0/0:17,0:17:45.13:0,45,519	0/0:12,0:12:33.10:0,33,381
chr10	85265922	.	GA	G	1201.29	PASS	AB=0.924;AC=14;AF=0.250;AN=56;BaseQRankSum=7.430;DP=498;FS=18.893;HRun=12;HaplotypeScore=58.7625;InbreedingCoeff=0.4836;MQ=73.68;MQ0=9;MQRankSum=2.155;QD=6.19;ReadPosRankSum=2.135;VQSLOD=0.5772;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,2:16:15.30:0,15,306	1/1:1,5:6:14.94:116,15,0	0/0:36,0:14:7.70:0,8,130	0/1:39,0:15:9.09:9,0,53	0/0:20,1:24:23.66:0,24,416	0/0:20,0:20:24.82:0,25,422	0/0:8,0:9:14.15:0,14,166	0/0:23,2:25:10.64:0,11,462	0/0:17,1:18:27.70:0,28,428	1/1:1,16:18:46.85:354,47,0	1/1:3,13:18:33.92:244,34,0	0/0:13,1:14:15.91:0,16,342	0/0:13,1:14:9.81:0,10,269	0/0:9,0:9:0.37:0,0,162	1/1:3,11:14:1.49:185,1,0	0/0:12,0:12:17.94:0,18,163	1/1:3,24:28:34.34:440,34,0	0/0:10,0:12:19.36:0,19,262	0/0:8,0:9:0.65:0,1,173	0/1:18,2:20:8.75:9,0,418	0/0:7,0:7:21.03:0,21,207	0/0:5,0:6:17.87:0,18,166	0/0:19,1:20:5.91:0,6,254	0/0:11,3:14:3.81:0,4,215	0/0:14,1:18:23.58:0,24,403	0/1:21,3:25:9.88:10,0,418	0/0:17,1:19:17.90:0,18,372	0/1:21,3:25:0.76:1,0,510
chr10	85266752	.	GT	G	3737.89	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.833;DP=501;FS=18.107;HRun=2;HaplotypeScore=61.0727;InbreedingCoeff=0.9869;MQ=90.23;MQ0=0;MQRankSum=-1.682;QD=33.67;ReadPosRankSum=1.074;VQSLOD=1.8674;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:60.20:779,60,0	0/0:3,0:3:9:0,9,112	0/0:21,0:21:61.43:0,61,858	0/0:17,0:17:45.15:0,45,670	0/0:23,0:23:54.18:0,54,805	0/0:18,0:18:54.18:0,54,810	1/1:0,19:19:54.18:701,54,0	0/0:31,0:31:87.29:0,87,1300	0/0:19,0:19:54.18:0,54,810	0/0:19,0:19:36.12:0,36,528	0/0:20,0:20:45.15:0,45,669	1/1:0,15:15:39.13:506,39,0	1/1:0,16:16:48.16:623,48,0	1/1:0,22:22:60.20:779,60,0	0/0:17,0:17:51.15:0,51,741	0/0:13,0:13:30.10:0,30,450	0/0:27,0:27:75.18:0,75,1070	1/1:1,11:12:27.09:350,27,0	0/0:12,0:12:36.11:0,36,522	0/0:22,0:22:45.15:0,45,664	0/0:17,0:17:45.15:0,45,675	0/0:10,0:10:30.07:0,30,426	0/0:17,0:17:51.17:0,51,754	0/0:22,0:22:66.22:0,66,989	0/0:15,0:15:45.15:0,45,665	0/0:20,0:20:42.14:0,42,629	0/0:20,0:20:57.18:0,57,829	0/0:7,0:7:21.07:0,21,315
chr10	85266844	.	CTTTTTTCTTT	C	638.61	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.892;DP=504;FS=9.047;HRun=0;HaplotypeScore=165.9497;InbreedingCoeff=0.9879;MQ=63.90;MQ0=5;MQRankSum=-4.427;QD=27.77;ReadPosRankSum=-0.367;VQSLOD=2.7234;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,7:23:32.83:733,33,0	0/0:11,0:11:33.11:0,33,1535	0/0:21,0:13:35.85:0,36,940	0/0:15,0:12:30.07:0,30,1014	0/0:26,0:26:72.24:0,72,3270	0/0:19,0:19:51.18:0,51,2399	0/0:19,0:19:54.11:0,54,2414	0/0:26,0:25:60.21:0,60,2222	0/0:14,0:14:39.13:0,39,1688	0/0:23,0:23:60.17:0,60,2241	0/0:17,0:17:42.57:0,43,1632	0/0:14,0:14:36.02:0,36,1469	0/0:21,0:21:57.20:0,57,2572	0/0:13,0:13:33.11:0,33,1590	0/0:12,0:12:26.71:0,27,898	0/0:14,0:14:36.12:0,36,1719	0/0:29,0:30:66.17:0,66,2640	0/0:25,0:24:60.21:0,60,2825	0/0:16,0:15:45.15:0,45,1863	0/0:16,0:16:42.14:0,42,1657	0/0:13,0:13:27.09:0,27,1043	0/0:17,0:17:45.15:0,45,2287	0/0:20,0:20:54.15:0,54,2172	0/0:18,0:18:54.17:0,54,2612	0/0:20,0:20:60.20:0,60,2426	0/0:12,0:12:33.09:0,33,1133	0/0:21,0:21:51.63:0,52,1806	0/0:8,0:7:18.06:0,18,781
chr10	85266851	.	C	CT	4074.02	PASS	AB=0.789;AC=24;AF=0.429;AN=56;BaseQRankSum=2.108;DP=489;FS=0.000;HRun=8;HaplotypeScore=62.5825;InbreedingCoeff=0.8346;MQ=60.40;MQ0=9;MQRankSum=0.763;QD=18.95;ReadPosRankSum=0.482;VQSLOD=3.2961;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:33.53:0,34,207	0/1:3,8:11:24.85:247,0,25	0/1:19,0:11:16.82:17,0,41	0/0:12,0:9:8.94:0,9,134	0/0:30,0:30:66.01:0,66,602	0/0:18,0:18:48.02:0,48,439	0/0:19,0:17:45:0,45,407	1/1:10,14:23:42.12:484,42,0	0/0:15,1:16:8:0,8,323	1/1:7,12:19:38.94:420,39,0	1/1:6,10:16:30.09:340,30,0	0/0:12,0:12:35.99:0,36,323	0/0:22,0:22:63.01:0,63,570	0/0:12,0:12:33:0,33,297	1/1:3,10:13:17.73:207,18,0	0/0:15,0:15:39:0,39,352	1/1:2,23:25:32.85:631,33,0	0/0:24,0:23:50.94:0,51,451	1/1:9,7:15:24.07:277,24,0	1/1:4,11:15:26.96:268,27,0	1/1:1,12:13:24.07:277,24,0	0/0:18,0:18:39:0,39,357	0/0:20,0:20:48.02:0,48,439	0/0:18,0:18:48.02:0,48,439	0/0:20,0:20:53.99:0,54,483	1/1:2,10:12:30.03:319,30,0	1/1:6,14:20:33.10:381,33,0	1/1:2,9:9:18.05:208,18,0
chr10	85267209	.	T	TA	1660.52	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-8.677;DP=437;FS=7.200;HRun=8;HaplotypeScore=53.9404;InbreedingCoeff=0.8836;MQ=74.11;MQ0=0;MQRankSum=2.052;QD=19.54;ReadPosRankSum=2.741;VQSLOD=3.4355;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,108,977	0/0:3,0:3:9:0,9,82	0/0:15,0:12:20.69:0,21,163	0/1:11,0:10:8.57:9,0,66	0/0:20,0:20:56.99:0,57,506	0/0:15,0:15:35.98:0,36,319	1/1:2,12:14:24.07:278,24,0	0/0:24,0:24:53.99:0,54,485	0/0:16,0:16:44.97:0,45,398	0/0:14,0:14:41.70:0,42,367	0/0:18,0:18:50:0,50,426	1/1:1,14:15:33.10:381,33,0	1/1:0,5:5:12.04:139,12,0	1/1:0,12:12:24.07:278,24,0	0/0:12,0:12:32.59:0,33,277	1/1:0,9:9:24.07:278,24,0	0/0:21,0:21:56.99:0,57,514	1/1:3,16:19:42.12:486,42,0	0/0:17,0:17:48.01:0,48,436	0/0:23,0:23:60:0,60,540	0/0:12,0:12:29.05:0,29,253	0/0:7,0:7:11.99:0,12,105	0/0:14,0:14:36.02:0,36,329	0/0:5,0:5:15.01:0,15,137	0/0:22,0:22:56.99:0,57,508	0/0:22,0:22:53.86:0,54,481	0/0:13,0:13:29.99:0,30,268	0/0:17,0:17:47.98:0,48,432
chr10	85267324	.	CGTGTGTGTGTGTGTGTGTGTGTGTGTGT	C	2032.66	PASS	AB=0.938;AC=14;AF=0.250;AN=56;BaseQRankSum=3.803;DP=455;FS=6.109;HRun=0;HaplotypeScore=292.4911;InbreedingCoeff=0.5410;MQ=60.64;MQ0=8;MQRankSum=-2.092;QD=14.12;ReadPosRankSum=-1.192;VQSLOD=1.4965;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:43.02:0,43,2988	0/0:7,0:7:3.01:0,3,89	0/0:20,0:12:3.01:0,3,129	0/0:19,0:13:18.06:0,18,560	0/0:11,0:11:18.06:0,18,1241	0/0:16,0:16:27.98:0,28,1988	0/0:19,0:22:6.02:0,6,242	1/1:17,0:17:3:29,3,0	0/0:9,0:9:9.03:0,9,830	0/0:17,0:16:18.06:0,18,915	0/0:10,0:10:12.04:0,12,749	0/0:8,0:8:18.05:0,18,1419	0/0:8,0:11:18.06:0,18,1292	0/0:18,0:17:27.09:0,27,1549	0/0:8,0:12:21.06:0,21,1210	0/0:11,0:11:18.06:0,18,1010	0/0:37,0:36:51.16:0,51,2819	0/1:12,0:13:22.95:26,0,23	1/1:14,0:13:3:195,3,0	1/1:22,5:28:18.01:1079,18,0	0/1:28,0:28:18:65,0,18	0/0:11,0:11:18.06:0,18,1787	0/0:7,0:7:12.04:0,12,1364	0/0:22,0:24:45.60:0,46,4688	0/0:13,0:13:14.11:0,14,1107	1/1:12,2:14:6.02:153,6,0	1/1:11,4:15:5.20:430,5,0	1/1:12,2:14:1.50:213,1,0
chr10	85269188	.	CCAT	C	7907.32	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=17.153;DP=603;FS=18.158;HRun=0;HaplotypeScore=121.4791;InbreedingCoeff=0.9445;MQ=62.05;MQ0=0;MQRankSum=-6.244;QD=29.73;ReadPosRankSum=0.892;VQSLOD=4.1875;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,3269	1/1:9,0:9:27.09:430,27,0	0/1:16,0:11:4.28:4,0,323	0/0:16,0:14:29.93:0,30,573	0/0:37,0:37:99:0,105,2445	0/0:15,0:15:42.14:0,42,982	0/0:21,0:21:60.21:0,60,1385	1/1:26,0:26:63.44:632,63,0	0/0:20,0:20:60.19:0,60,1328	1/1:36,1:37:99:1586,111,0	1/1:11,7:18:27.09:394,27,0	0/0:12,0:12:33.10:0,33,760	0/0:15,0:15:45.14:0,45,988	0/0:23,0:23:66.23:0,66,1481	1/1:21,0:21:39.05:556,39,0	0/0:22,0:22:66.21:0,66,1461	1/1:20,0:20:50.49:670,50,0	0/0:25,0:25:75.19:0,75,1622	1/1:27,0:26:71.86:917,72,0	1/1:23,0:23:50.50:637,50,0	1/1:16,0:16:15.02:190,15,0	0/0:25,0:25:75.26:0,75,1758	0/0:17,0:17:48.14:0,48,985	0/0:25,0:25:75.26:0,75,1666	0/0:16,0:16:45.15:0,45,1046	1/1:20,0:20:56.74:695,57,0	1/1:23,0:23:62.87:837,63,0	1/1:10,0:10:29.75:359,30,0
chr10	85269189	.	CAT	C	8861.25	PASS	AB=0.842;AC=25;AF=0.446;AN=56;BaseQRankSum=16.529;DP=597;FS=17.951;HRun=0;HaplotypeScore=106.0056;InbreedingCoeff=0.9251;MQ=62.81;MQ0=1;MQRankSum=-5.534;QD=33.82;ReadPosRankSum=0.692;VQSLOD=5.3680;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,2801	1/1:0,9:9:27.09:422,27,0	0/1:13,3:10:35.27:35,0,263	0/0:16,0:14:30.03:0,30,550	0/0:37,0:37:99:0,105,2095	0/0:15,0:15:42.14:0,42,838	0/0:21,0:21:60.21:0,60,1186	1/1:1,24:26:71.80:861,72,0	0/0:20,0:20:60.19:0,60,1159	1/1:1,36:37:99:1715,111,0	1/1:7,11:18:27.09:428,27,0	0/0:12,0:12:33.10:0,33,652	0/0:16,0:16:48.15:0,48,908	0/0:22,0:22:66.23:0,66,1279	1/1:0,20:20:39.10:577,39,0	0/0:22,0:22:66.21:0,66,1267	1/1:0,20:20:51.17:817,51,0	0/0:25,0:25:75.21:0,75,1437	1/1:0,25:25:72.22:998,72,0	1/1:0,22:23:51.17:713,51,0	1/1:0,16:16:15.04:204,15,0	0/0:25,0:25:75.26:0,75,1499	0/0:16,0:16:48.16:0,48,921	0/0:25,0:25:75.26:0,75,1440	0/0:15,0:15:45.15:0,45,899	1/1:0,19:19:57.16:761,57,0	1/1:0,17:22:63.21:897,63,0	1/1:0,7:10:30.10:431,30,0
chr10	85269193	.	CT	C	2924.57	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=16.341;DP=618;FS=4.152;HRun=11;HaplotypeScore=118.0057;InbreedingCoeff=0.9849;MQ=65.58;MQ0=2;MQRankSum=-7.938;QD=11.99;ReadPosRankSum=2.942;VQSLOD=3.2282;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,2:50:88.78:0,89,1318	1/1:2,9:11:31.88:232,32,0	0/0:25,0:16:22.72:0,23,159	0/0:15,0:13:19.10:0,19,141	0/0:37,1:40:80.17:0,80,1009	0/0:14,0:15:32.95:0,33,334	0/0:22,0:22:32.59:0,33,542	1/1:17,8:26:26.70:156,27,0	0/0:20,0:21:50.27:0,50,557	1/1:11,26:38:97.24:705,97,0	1/1:9,10:19:20.84:160,21,0	0/0:13,0:13:33.96:0,34,346	0/0:16,0:16:45.10:0,45,473	0/0:22,0:23:56.09:0,56,596	1/1:8,12:20:33.23:238,33,0	0/0:4,0:26:60.10:0,60,318	1/1:7,10:19:9.42:245,9,0	0/0:23,1:24:38.29:0,38,585	1/1:5,18:22:56.09:355,56,0	1/1:5,18:23:40.35:247,40,0	1/1:8,7:15:12.35:82,12,0	0/0:26,0:26:60.15:0,60,640	0/0:15,0:15:39.08:0,39,408	0/0:24,2:26:19.81:0,20,590	0/0:17,0:17:39.07:0,39,396	1/1:5,13:18:43.61:265,44,0	1/1:6,16:22:50.24:326,50,0	1/1:3,7:10:20.79:141,21,0
chr10	85269280	.	C	CA	192.58	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=5.791;DP=583;FS=3.636;HRun=8;HaplotypeScore=67.3571;InbreedingCoeff=0.6254;MQ=73.87;MQ0=0;MQRankSum=-0.670;QD=4.48;ReadPosRankSum=-2.138;VQSLOD=-0.3105;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1043	0/0:7,0:7:21.01:0,21,192	0/1:26,0:24:9.93:10,0,242	0/0:20,0:17:8.70:0,9,171	0/0:25,0:25:69.03:0,69,632	0/0:14,0:14:39.02:0,39,357	0/0:18,0:18:44.04:0,44,386	0/0:25,0:25:60.03:0,60,549	0/0:16,0:16:42.02:0,42,384	0/0:25,0:25:69.03:0,69,632	0/0:18,0:18:51.03:0,51,467	0/0:25,0:25:66:0,66,595	0/0:16,0:16:39.01:0,39,357	0/0:17,0:17:39.02:0,39,357	0/0:14,0:14:33.01:0,33,302	0/0:14,0:14:35.99:0,36,324	0/0:20,0:20:32.28:0,32,441	1/1:6,11:17:26.10:284,26,0	0/0:26,0:26:72.04:0,72,659	0/0:23,0:23:63.03:0,63,576	0/0:15,0:15:36.01:0,36,329	0/0:29,0:29:81.02:0,81,736	0/0:24,0:24:66.03:0,66,604	0/0:16,0:16:16.15:0,16,282	0/0:25,0:25:72.04:0,72,659	0/0:24,0:24:60.02:0,60,549	0/0:38,0:38:99:0,102,926	0/0:5,0:5:15.01:0,15,137
chr10	85269809	.	CGTCT	C	10377.05	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=14.374;DP=686;FS=5.511;HRun=0;HaplotypeScore=124.4751;InbreedingCoeff=0.9996;MQ=60.99;MQ0=1;MQRankSum=-3.136;QD=36.67;ReadPosRankSum=3.196;VQSLOD=5.0946;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:96.32:0,96,2383	1/1:0,11:11:24:416,24,0	0/0:31,0:29:57.20:0,57,1318	0/0:27,0:25:54.14:0,54,1085	0/0:23,0:23:54.19:0,54,1367	0/0:21,0:21:54.19:0,54,1359	0/0:31,0:31:81.28:0,81,2022	1/1:5,16:21:48.16:832,48,0	0/0:37,0:37:96.33:0,96,2357	1/1:3,23:26:60.18:996,60,0	1/1:2,21:23:51.17:884,51,0	0/0:25,0:25:63.22:0,63,1597	0/0:22,0:22:54.19:0,54,1306	0/0:26,0:26:72.23:0,72,1710	1/1:7,29:36:69.24:1196,69,0	0/0:18,0:18:47.53:0,48,1142	1/1:3,27:30:66.23:1147,66,0	0/0:17,0:18:45.15:0,45,1086	1/1:3,16:19:39.13:666,39,0	1/1:2,16:17:42.10:698,42,0	1/1:4,30:33:51.17:887,51,0	0/0:18,0:18:45.15:0,45,1143	0/0:15,0:15:33.11:0,33,786	0/0:31,0:31:90.31:0,90,2265	0/0:18,0:18:51.18:0,51,1251	1/1:4,21:25:60.21:1043,60,0	1/1:2,23:25:57.20:989,57,0	1/1:1,14:15:36.12:622,36,0
chr10	85269970	.	CGT	C	209.63	PASS	AB=0.881;AC=16;AF=0.400;AN=40;BaseQRankSum=3.411;DP=458;FS=11.140;HRun=0;HaplotypeScore=74.0579;InbreedingCoeff=0.0425;MQ=44.75;MQ0=28;MQRankSum=-2.006;QD=1.13;ReadPosRankSum=0.245;VQSLOD=0.6825;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,3:29:16.39:16,0,134	1/1:3,0:6:5.68:28,6,0	./.	./.	0/0:22,0:21:6.02:0,6,88	0/0:18,0:16:15.02:0,15,179	./.	./.	0/1:17,2:19:16.84:17,0,161	./.	./.	0/0:13,0:12:6:0,6,60	0/0:12,0:14:8.83:0,9,78	0/0:8,0:12:3:0,3,26	./.	1/1:3,0:7:5.52:25,6,0	1/1:7,0:7:2.62:14,3,0	0/1:10,3:11:11.46:65,0,11	./.	1/1:9,0:11:0.17:1,0,0	0/0:20,0:17:0:0,0,0	0/0:12,1:12:6.01:0,6,80	0/0:14,0:14:3.01:0,3,42	0/1:31,6:36:99:101,0,145	0/1:26,0:26:18.78:19,0,188	0/1:12,0:15:17.24:17,0,33	1/1:8,0:10:2.99:29,3,0	0/0:6,0:5:0.47:0,0,1
chr10	85270762	.	T	TC	18390.14	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-6.250;DP=752;FS=3.011;HRun=1;HaplotypeScore=84.0994;InbreedingCoeff=0.9957;MQ=74.35;MQ0=0;MQRankSum=-4.335;QD=42.57;ReadPosRankSum=0.617;VQSLOD=4.9680;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,150,1948	1/1:0,15:15:45.15:674,45,0	0/0:27,0:27:65.58:0,66,960	0/0:25,0:25:63.20:0,63,795	0/0:29,0:29:87.24:0,87,1085	0/0:25,0:25:75.24:0,75,973	1/1:0,17:17:48.16:720,48,0	1/1:0,26:26:72.24:1073,72,0	0/0:24,0:24:66.21:0,66,856	1/1:1,36:37:99:1602,108,0	1/1:1,23:24:69.23:1022,69,0	1/1:0,20:20:57.19:854,57,0	1/1:2,19:21:60.20:889,60,0	1/1:1,26:27:75.25:1123,75,0	1/1:2,25:27:75.25:1124,75,0	1/1:1,16:17:12.21:681,12,0	1/1:3,39:42:99:1835,123,0	0/0:27,0:27:81.26:0,81,1047	1/1:1,22:23:66.20:964,66,0	1/1:0,19:20:60.20:885,60,0	1/1:0,30:30:87.29:1304,87,0	0/0:33,0:33:99:0,99,1282	0/0:31,0:31:90.27:0,90,1151	0/0:20,0:20:57.18:0,57,740	0/0:29,0:29:84.27:0,84,1091	1/1:2,37:39:99:1664,111,0	1/1:0,35:35:96.33:1437,96,0	1/1:0,12:12:36.12:539,36,0
chr10	85270822	.	A	AT	3550.19	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-3.171;DP=645;FS=6.439;HRun=6;HaplotypeScore=85.8095;InbreedingCoeff=0.9999;MQ=78.62;MQ0=0;MQRankSum=-4.208;QD=31.42;ReadPosRankSum=1.223;VQSLOD=3.9814;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,129,1292	1/1:6,13:19:50.89:556,51,0	0/0:21,0:21:51.11:0,51,520	0/0:16,0:16:36.05:0,36,354	0/0:34,0:34:99:0,99,997	0/0:28,0:28:81.09:0,81,805	0/0:19,0:19:54.12:0,54,551	0/0:32,0:32:72.14:0,72,723	0/0:23,0:23:60.08:0,60,589	1/1:6,23:29:75.23:930,75,0	1/1:0,18:18:53.96:610,54,0	0/0:12,0:12:36.05:0,36,353	0/0:24,0:24:63.14:0,63,643	0/0:19,0:19:51.11:0,51,514	1/1:2,18:20:54.09:643,54,0	0/0:15,0:15:39.08:0,39,393	1/1:6,21:27:66.17:812,66,0	0/0:15,0:15:42.08:0,42,421	0/0:19,0:19:48.10:0,48,485	0/0:19,0:19:54.12:0,54,550	0/0:23,0:23:66.15:0,66,673	0/0:27,0:27:78.15:0,78,778	0/0:23,0:23:60.12:0,60,607	0/0:22,0:22:60.10:0,60,603	0/0:17,0:17:48.06:0,48,474	0/0:37,1:38:67.42:0,67,981	0/0:27,0:27:69.12:0,69,689	0/0:12,0:12:36.08:0,36,366
chr10	85272661	.	G	GAA	4968.55	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-3.557;DP=572;FS=6.843;HRun=9;HaplotypeScore=79.0354;InbreedingCoeff=0.9878;MQ=64.33;MQ0=13;MQRankSum=1.774;QD=29.93;ReadPosRankSum=-3.005;VQSLOD=4.2571;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:96.23:0,96,1019	0/0:10,0:10:27.06:0,27,287	0/0:14,0:10:19.54:0,20,228	0/0:12,0:10:27.04:0,27,268	0/0:25,0:24:60.14:0,60,638	0/0:31,0:32:75.13:0,75,846	1/1:4,0:16:27.92:95,28,0	1/1:5,23:27:69.71:1058,70,0	0/0:18,0:17:39.09:0,39,415	0/0:30,0:27:66.13:0,66,702	0/0:23,0:22:56.71:0,57,549	0/0:16,0:16:42.10:0,42,446	0/0:10,0:10:27.07:0,27,287	0/0:11,0:11:30.06:0,30,319	0/0:15,0:15:30.06:0,30,311	0/0:17,0:16:39.10:0,39,415	0/0:29,0:32:68.54:0,69,730	0/0:32,0:25:69.17:0,69,733	1/1:11,25:37:80.64:1114,81,0	1/1:5,17:24:59.68:850,60,0	1/1:3,8:10:27.05:389,27,0	0/0:18,0:18:41.97:0,42,446	0/0:11,0:11:24.05:0,24,255	0/0:20,0:20:51.12:0,51,543	0/0:22,0:22:63.15:0,63,671	1/1:1,20:21:31.18:816,31,0	1/1:4,16:19:33.11:508,33,0	1/1:1,7:7:9.03:139,9,0
chr10	85272979	.	G	GTCTGTC	5272	PASS	AC=30;AF=0.556;AN=54;BaseQRankSum=2.507;DP=693;FS=10.244;HRun=0;HaplotypeScore=178.1526;InbreedingCoeff=0.8205;MQ=70.72;MQ0=5;MQRankSum=-6.519;QD=13.69;ReadPosRankSum=-1.728;VQSLOD=2.6323;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:14.06:255,14,0	1/1:16,0:19:20.95:336,21,0	./.	0/0:41,0:33:0:0,0,0	0/0:12,0:12:12.03:0,12,204	0/0:23,0:23:21.07:0,21,417	1/1:13,4:18:6.02:128,6,0	1/1:31,0:30:4.21:23,4,0	0/0:10,0:24:12.04:0,12,168	1/1:30,0:30:23.73:352,24,0	0/0:15,0:15:0:0,0,0	1/1:31,0:36:14.59:519,15,0	1/1:24,0:32:21.07:531,21,0	1/1:27,0:33:15.05:394,15,0	0/0:35,0:35:36.11:0,36,667	0/0:29,0:29:39.13:0,39,774	1/1:29,0:29:2.83:292,3,0	1/1:18,0:18:17.95:267,18,0	1/1:20,2:23:9.02:204,9,0	1/1:11,6:18:18.06:524,18,0	0/0:32,5:37:3.37:0,3,18	0/0:7,0:7:12.04:0,12,238	0/0:12,0:12:15.02:0,15,227	0/0:28,0:28:45.11:0,45,744	0/0:18,0:18:24.08:0,24,467	1/1:12,3:18:24.05:514,24,0	1/1:20,7:31:15.05:476,15,0	1/1:11,4:15:15.05:458,15,0
chr10	85273747	.	AG	A	573.01	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.631;DP=697;FS=1.991;HRun=3;HaplotypeScore=93.9697;InbreedingCoeff=0.9971;MQ=79.68;MQ0=0;MQRankSum=-0.387;QD=31.83;ReadPosRankSum=-0.046;VQSLOD=3.4623;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,135,1899	0/0:12,0:12:32.81:0,33,253	0/0:19,0:19:45.14:0,45,630	0/0:19,0:19:48.04:0,48,617	0/0:24,0:24:72.22:0,72,1010	0/0:11,0:11:30.10:0,30,432	0/0:29,0:28:84.22:0,84,1150	0/0:27,0:27:72.18:0,72,982	0/0:15,0:15:45.15:0,45,646	0/0:30,0:30:88.70:0,89,593	0/0:14,0:14:41.84:0,42,323	0/0:21,0:21:60.18:0,60,828	0/0:21,0:21:60.20:0,60,858	0/0:36,0:36:99:0,102,1468	0/0:36,0:36:99:0,108,1553	0/0:25,0:25:72.21:0,72,1000	0/0:53,0:53:99:0,149,1171	1/1:0,18:18:54.17:668,54,0	0/0:26,0:26:72.20:0,72,996	0/0:23,0:23:63.18:0,63,844	0/0:29,0:29:84.27:0,84,1172	0/0:14,0:14:42.14:0,42,603	0/0:18,0:18:54.17:0,54,754	0/0:36,0:36:99:0,108,1534	0/0:22,0:21:63.20:0,63,888	0/0:29,0:29:84.19:0,84,1145	0/0:32,0:32:93.30:0,93,1318	0/0:8,0:8:24.08:0,24,346
chr10	85274440	.	A	AAACAACAAC	6482.98	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-8.180;DP=582;FS=9.978;HRun=0;HaplotypeScore=150.4306;InbreedingCoeff=0.9875;MQ=67.36;MQ0=0;MQRankSum=-10.790;QD=74.52;ReadPosRankSum=0.682;VQSLOD=4.0837;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:57.15:0,57,1359	0/0:10,0:10:18.05:0,18,454	0/0:21,0:21:57.13:0,57,1195	0/0:12,0:11:11.23:0,11,423	0/0:21,0:21:57.20:0,57,1592	0/0:23,0:23:54.19:0,54,1484	0/0:17,0:17:48.16:0,48,1348	0/0:24,0:24:60.19:0,60,1521	0/0:20,0:20:54.19:0,54,1506	0/0:28,0:28:72.02:0,72,1811	0/0:26,0:26:54.14:0,54,1358	1/1:2,12:14:27.09:1252,27,0	1/1:1,15:17:21.07:974,21,0	1/1:3,16:19:24.08:1113,24,0	1/1:5,15:20:36.12:1669,36,0	1/1:10,7:17:42.14:1475,42,0	0/0:26,0:27:37.55:0,38,1852	0/0:27,0:27:66.12:0,66,1530	0/0:14,0:14:24.55:0,25,663	0/0:39,0:39:75.25:0,75,2024	0/0:21,0:21:57.18:0,57,1501	0/0:26,0:26:69.24:0,69,1860	0/0:21,0:21:55.03:0,55,1280	0/0:15,0:15:36.10:0,36,817	0/0:26,0:26:57.14:0,57,1387	0/0:22,0:22:63.20:0,63,1648	0/0:18,0:18:48.14:0,48,1158	0/0:14,0:14:36.11:0,36,967
chr10	85274515	.	C	CAA	2192.97	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=6.385;DP=545;FS=7.461;HRun=11;HaplotypeScore=102.6464;InbreedingCoeff=0.8689;MQ=74.33;MQ0=0;MQRankSum=-8.197;QD=18.12;ReadPosRankSum=-3.739;VQSLOD=1.7232;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:20:32.86:0,33,142	0/0:7,0:7:14.96:0,15,145	0/0:17,0:18:20.44:0,20,172	0/0:6,0:6:1.59:0,2,48	0/0:23,0:23:56.91:0,57,539	0/0:18,0:20:44.72:0,45,468	0/0:13,0:14:26.62:0,27,238	0/0:27,0:28:59.74:0,60,565	0/0:23,0:23:44.90:0,45,430	0/0:33,0:33:59.95:0,60,570	0/1:15,0:15:6.99:7,0,279	1/1:8,1:15:34.91:389,35,0	1/1:12,0:15:28.72:242,29,0	1/1:7,0:17:42.01:423,42,0	1/1:10,9:22:49.36:572,49,0	1/1:8,12:20:45.08:601,45,0	0/0:26,0:28:26.54:0,27,338	1/1:8,1:16:28.64:147,29,0	0/0:21,0:23:59.44:0,59,524	0/0:29,0:29:63.02:0,63,611	0/0:14,0:14:30.03:0,30,291	0/0:17,0:18:47.74:0,48,432	0/0:14,0:14:23.93:0,24,233	0/0:15,0:18:23.71:0,24,265	0/0:23,0:24:53.98:0,54,573	0/0:21,0:22:41.94:0,42,453	0/0:30,0:30:53.96:0,54,515	0/0:11,0:11:14.98:0,15,145
chr10	85274547	.	AT	A	1996.22	PASS	AB=0.709;AC=26;AF=0.464;AN=56;BaseQRankSum=5.337;DP=514;FS=0.000;HRun=12;HaplotypeScore=77.9491;InbreedingCoeff=0.6696;MQ=59.54;MQ0=1;MQRankSum=-2.032;QD=8.08;ReadPosRankSum=0.614;VQSLOD=2.6059;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:24:43.04:0,43,235	0/0:4,0:10:20.05:0,20,116	0/0:5,0:3:2.84:0,3,14	0/1:10,0:9:6.52:7,0,90	0/0:26,0:28:50.92:0,51,489	0/0:17,1:20:18.66:0,19,340	1/1:4,12:16:23.90:186,24,0	0/1:10,12:22:19.26:226,0,19	0/0:25,1:27:39.84:0,40,564	0/0:6,0:23:54.80:0,55,325	0/0:2,0:13:31.54:0,32,179	1/1:3,0:10:14.25:41,14,0	1/1:2,0:12:20.36:59,20,0	1/1:3,0:15:24.43:71,24,0	1/1:3,1:20:34:112,34,0	1/1:2,0:16:24.43:71,24,0	0/0:8,1:35:40.23:0,40,346	1/1:5,0:9:6.08:18,6,0	1/1:7,14:21:14.34:293,14,0	1/1:5,14:19:7.52:200,8,0	0/1:6,11:17:52.47:193,0,52	0/0:14,0:16:32.73:0,33,297	0/0:15,0:16:41.92:0,42,410	0/0:5,0:22:34.41:0,34,199	0/0:25,1:27:39.88:0,40,573	1/1:8,11:20:21.35:233,21,0	1/1:6,26:33:58.71:441,59,0	0/1:2,5:6:18.48:58,0,18
chr10	85274741	.	C	CTTCTACTGA	1743.34	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.776;DP=689;FS=5.532;HRun=0;HaplotypeScore=209.6278;InbreedingCoeff=0.9949;MQ=74.87;MQ0=0;MQRankSum=-6.304;QD=75.80;ReadPosRankSum=-0.201;VQSLOD=3.2990;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,11:23:42.10:1838,42,0	0/0:9,0:9:24.08:0,24,687	0/0:15,0:15:30.10:0,30,801	0/0:12,0:12:33.11:0,33,771	0/0:31,0:31:81.24:0,81,2079	0/0:28,0:28:81.28:0,81,2255	0/0:17,0:17:45.13:0,45,1219	0/0:38,0:38:84.26:0,84,2180	0/0:37,0:37:93.31:0,93,2591	0/0:22,0:22:63.20:0,63,1710	0/0:22,0:22:57.18:0,57,1535	0/0:31,0:31:78.25:0,78,2051	0/0:16,0:16:42.14:0,42,1222	0/0:28,0:28:72.22:0,72,1984	0/0:30,0:30:81.26:0,81,2234	0/0:21,0:21:57.20:0,57,1629	0/0:32,0:32:75.26:0,75,2196	0/0:29,0:29:69.21:0,69,1889	0/0:24,0:24:69.24:0,69,1894	0/0:36,0:36:90.30:0,90,2466	0/0:29,0:29:81.28:0,81,2347	0/0:23,0:23:54.19:0,54,1563	0/0:16,0:16:36.12:0,36,1017	0/0:42,0:42:99:0,111,3211	0/0:15,0:15:39.13:0,39,1115	0/0:20,0:20:48.15:0,48,1344	0/0:33,0:32:96.33:0,96,2756	0/0:10,0:10:24.08:0,24,704
chr10	85274853	.	G	GGTTT	656.47	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.151;DP=664;FS=1.083;HRun=0;HaplotypeScore=112.9585;InbreedingCoeff=0.9958;MQ=69.20;MQ0=0;MQRankSum=-2.591;QD=23.45;ReadPosRankSum=0.021;VQSLOD=3.3351;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,15:28:33.07:751,33,0	0/0:9,0:9:24.07:0,24,369	0/0:24,0:23:29.20:0,29,428	0/0:27,0:26:38.56:0,39,713	0/0:29,0:29:72.25:0,72,1168	0/0:23,0:24:63.20:0,63,987	0/0:30,0:30:60.20:0,60,983	0/0:25,0:25:42.14:0,42,675	0/0:21,0:21:48.16:0,48,773	0/0:16,0:16:36.12:0,36,587	0/0:17,0:17:42.14:0,42,688	0/0:17,0:17:39.13:0,39,639	0/0:23,0:23:57.19:0,57,934	0/0:14,0:14:36.12:0,36,590	0/0:30,0:30:63.21:0,63,1018	0/0:20,0:20:33.10:0,33,516	0/0:33,0:33:71.17:0,71,1290	0/0:27,0:27:72.22:0,72,1153	0/0:26,0:25:36.06:0,36,523	0/0:26,0:25:51.16:0,51,811	0/0:27,0:27:60.17:0,60,933	0/0:21,0:21:57.19:0,57,934	0/0:21,0:21:45.15:0,45,737	0/0:32,0:32:69.23:0,69,1130	0/0:15,0:15:33.11:0,33,541	0/0:27,0:27:39.13:0,39,639	0/0:36,0:35:78.23:0,78,1214	0/0:19,0:19:36.07:0,36,515
chr10	85275000	.	T	TC	2308.02	PASS	AB=0.792;AC=24;AF=0.444;AN=54;BaseQRankSum=-9.142;DP=445;FS=13.430;HRun=9;HaplotypeScore=70.5420;InbreedingCoeff=0.6685;MQ=81.36;MQ0=0;MQRankSum=-1.802;QD=10.89;ReadPosRankSum=-3.226;VQSLOD=0.5342;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,2:23:11.53:76,12,0	./.	0/0:18,0:18:16.32:0,16,193	0/1:14,0:14:15.87:16,0,143	0/0:25,1:26:59.94:0,60,515	0/0:20,0:20:44.95:0,45,388	1/1:4,12:16:30.08:332,30,0	1/1:10,12:22:27.05:287,27,0	0/0:17,0:17:41.94:0,42,358	1/1:7,0:7:3:26,3,0	0/1:7,0:7:0:0,0,0	0/0:14,0:14:22.41:0,22,65	0/0:16,0:16:28.52:0,29,83	0/0:18,0:18:30.55:0,31,89	0/0:23,0:22:9.90:0,10,26	0/0:13,0:13:5.60:0,6,14	1/1:10,0:10:2.99:24,3,0	1/1:6,0:15:17.13:87,17,0	0/1:6,14:20:6.89:364,0,7	1/1:4,10:14:27.06:291,27,0	0/1:6,16:22:33.01:353,0,33	0/0:15,0:15:35.97:0,36,312	0/0:14,0:14:35.95:0,36,307	0/0:20,0:20:32.91:0,33,279	0/0:18,0:18:41.02:0,41,344	1/1:5,10:15:17.79:178,18,0	1/1:4,16:20:13.05:371,13,0	1/1:3,4:7:9.02:100,9,0
chr10	85275008	.	CCG	C	1804.10	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.137;DP=464;FS=0.000;HRun=0;HaplotypeScore=71.3395;InbreedingCoeff=0.9828;MQ=77.57;MQ0=0;MQRankSum=-1.743;QD=21.48;ReadPosRankSum=6.579;VQSLOD=3.7734;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:41.93:0,42,435	0/0:4,0:4:11.95:0,12,94	0/0:13,0:13:36.12:0,36,643	0/0:14,0:14:20.74:0,21,389	0/0:28,0:28:78.16:0,78,1303	0/0:20,0:20:57.11:0,57,945	0/0:15,0:15:39.08:0,39,464	0/0:21,0:21:47.94:0,48,475	0/0:18,0:18:51.13:0,51,873	0/0:13,0:13:35.76:0,36,307	0/0:14,0:14:26.95:0,27,251	1/1:0,15:15:33.11:482,33,0	1/1:1,15:16:42.14:613,42,0	1/1:0,16:16:45.15:658,45,0	1/1:25,0:24:46.62:146,47,0	1/1:12,0:12:24.80:80,25,0	0/0:15,0:15:32.83:0,33,249	0/0:11,0:11:21.03:0,21,245	0/0:22,0:22:65.98:0,66,735	0/0:15,0:15:41.99:0,42,443	0/0:23,0:23:57.04:0,57,694	0/0:17,0:17:50.92:0,51,788	0/0:18,0:18:54.13:0,54,841	0/0:15,0:15:45.08:0,45,745	0/0:16,0:16:47.34:0,47,803	0/0:14,0:14:36.04:0,36,390	0/0:24,0:24:53.10:0,53,570	0/0:6,0:6:12.02:0,12,133
chr10	85275009	.	CG	C	1811.65	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.768;DP=431;FS=5.446;HRun=1;HaplotypeScore=59.3307;InbreedingCoeff=0.9707;MQ=80.00;MQ0=0;MQRankSum=-0.999;QD=21.57;ReadPosRankSum=5.917;VQSLOD=3.7497;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:44.63:0,45,346	0/0:4,0:4:11.95:0,12,94	0/0:14,0:14:36.08:0,36,469	0/0:14,0:14:13.72:0,14,280	0/0:26,0:26:75.16:0,75,984	0/0:19,0:19:51.11:0,51,685	0/0:14,0:14:38.82:0,39,310	0/0:15,0:15:38.81:0,39,295	0/0:17,0:17:48.13:0,48,635	0/0:13,0:13:32.96:0,33,294	0/0:10,0:10:23.99:0,24,217	1/1:15,0:15:31.93:180,32,0	1/1:15,1:16:40.68:231,41,0	1/1:16,0:16:43.54:246,44,0	1/1:0,25:25:63.21:873,63,0	1/1:0,12:12:33.10:457,33,0	0/0:12,0:12:20.95:0,21,169	0/0:8,0:8:20.92:0,21,162	0/0:21,0:21:59.76:0,60,496	0/0:14,0:14:35.82:0,36,272	0/0:23,0:23:56.75:0,57,484	0/0:17,0:17:44.93:0,45,572	0/0:17,0:17:51.05:0,51,599	0/0:15,0:15:42.10:0,42,548	0/0:15,1:16:20.81:0,21,569	0/0:12,0:12:29.95:0,30,261	0/0:23,0:23:47.09:0,47,389	0/0:3,0:3:8.97:0,9,68
chr10	85275154	.	AG	A	467.47	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.158;DP=476;FS=0.000;HRun=1;HaplotypeScore=64.5792;InbreedingCoeff=0.9767;MQ=87.79;MQ0=0;MQRankSum=-2.273;QD=18.70;ReadPosRankSum=3.314;VQSLOD=3.9428;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1548	0/0:7,0:7:18.02:0,18,236	0/0:21,0:21:33.84:0,34,601	0/0:19,0:19:45.59:0,46,601	0/0:26,0:26:72.24:0,72,1139	0/0:21,0:21:60.19:0,60,927	0/0:12,0:12:30.10:0,30,444	0/0:17,0:17:51.16:0,51,770	0/0:16,0:16:48.16:0,48,743	0/0:10,0:10:27.09:0,27,402	0/0:10,0:10:24.08:0,24,341	0/0:14,0:14:41.46:0,41,352	0/0:11,0:11:32.19:0,32,232	0/0:18,0:18:44.42:0,44,354	1/1:2,12:14:36.04:337,36,0	1/1:0,11:11:23.05:252,23,0	0/0:22,0:22:66.19:0,66,960	0/0:17,0:17:48.16:0,48,701	0/0:12,0:12:33.11:0,33,519	0/0:23,0:23:66.17:0,66,985	0/0:22,0:22:60.19:0,60,926	0/0:16,0:16:42.14:0,42,666	0/0:14,0:14:42.14:0,42,657	0/0:27,0:27:81.25:0,81,1253	0/0:19,0:19:51.16:0,51,790	0/0:15,0:15:42.13:0,42,648	0/0:23,0:23:69.18:0,69,1049	0/0:4,0:4:12.04:0,12,192
chr10	85275156	.	A	AG	1556.19	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-9.486;DP=495;FS=1.814;HRun=9;HaplotypeScore=67.0182;InbreedingCoeff=0.9584;MQ=88.32;MQ0=0;MQRankSum=-1.560;QD=18.10;ReadPosRankSum=-0.239;VQSLOD=3.7926;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:80.95:0,81,702	1/1:2,5:7:12.50:134,13,0	0/0:19,0:21:33.94:0,34,257	0/0:21,0:21:16.34:0,16,192	0/0:27,0:27:68.96:0,69,595	0/0:19,0:19:53.99:0,54,469	1/1:2,13:15:7.65:276,8,0	0/0:19,0:19:35.95:0,36,310	0/0:20,0:20:50.92:0,51,429	1/1:3,8:11:21.06:232,21,0	1/1:5,6:11:11.54:132,12,0	0/0:1,0:13:24.44:0,24,72	0/0:0,0:11:22.41:0,22,66	0/0:2,0:18:26.35:0,26,77	0/0:15,0:15:25.33:0,25,77	0/0:12,0:12:18.80:0,19,58	1/1:5,19:24:54.15:597,54,0	1/1:4,14:18:33.09:365,33,0	0/0:14,0:14:26.97:0,27,234	0/0:25,0:26:31.70:0,32,424	0/0:20,0:20:50.98:0,51,443	0/0:16,0:16:35.98:0,36,313	0/0:14,0:14:32.99:0,33,286	0/0:26,0:26:65.98:0,66,573	0/0:18,0:18:44.66:0,45,390	0/0:14,0:14:32.99:0,33,286	0/0:23,0:23:44.98:0,45,391	0/0:5,0:5:11.99:0,12,104
chr10	85275523	.	GA	G	2096.95	PASS	AB=0.900;AC=16;AF=0.286;AN=56;BaseQRankSum=6.200;DP=453;FS=13.416;HRun=10;HaplotypeScore=49.4510;InbreedingCoeff=0.8192;MQ=74.81;MQ0=0;MQRankSum=0.414;QD=16.13;ReadPosRankSum=-0.010;VQSLOD=2.5929;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.13:0,57,614	0/0:8,0:8:24.05:0,24,251	0/1:12,2:12:17.75:18,0,128	0/1:10,1:10:34.75:35,0,105	0/0:26,0:26:69.19:0,69,763	0/0:21,0:21:54.14:0,54,590	0/0:4,0:12:25.73:0,26,147	1/1:4,12:16:35.95:308,36,0	0/0:18,0:18:51.12:0,51,550	0/0:22,0:21:58.39:0,58,621	0/0:13,0:13:39.10:0,39,426	0/0:14,0:14:36.09:0,36,391	0/0:15,0:15:39.06:0,39,418	0/0:20,0:20:57.15:0,57,623	0/0:13,0:13:33.09:0,33,365	0/0:13,1:14:13.03:0,13,356	0/0:19,1:20:25.86:0,26,506	0/0:23,0:23:57.13:0,57,621	1/1:0,12:12:35.99:312,36,0	1/1:1,19:20:26.81:461,27,0	1/1:2,8:10:20.99:182,21,0	0/0:10,0:10:24.06:0,24,260	0/0:13,0:14:38.92:0,39,397	0/0:18,0:18:48.07:0,48,508	0/0:22,0:22:61.38:0,61,647	1/1:3,17:20:20.81:409,21,0	1/1:1,17:18:41.99:365,42,0	1/1:0,8:8:24:208,24,0
chr10	85276234	.	TCTTCCGAAACCA	T	9949.67	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.339;DP=641;FS=2.460;HRun=0;HaplotypeScore=231.8880;InbreedingCoeff=0.9953;MQ=84.55;MQ0=0;MQRankSum=-14.169;QD=88.05;ReadPosRankSum=4.421;VQSLOD=4.4864;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,6488	0/0:7,0:7:21.07:0,21,1242	0/0:24,0:24:72.18:0,72,3643	0/0:19,0:19:18.25:0,18,2633	0/0:22,0:22:66.23:0,66,3845	0/0:18,0:18:54.19:0,54,3253	0/0:33,0:33:99:0,99,5899	0/0:20,0:20:57.19:0,57,3065	0/0:19,0:19:57.20:0,57,3504	0/0:28,0:28:73.50:0,74,4476	0/0:12,0:12:36.12:0,36,2221	1/1:2,22:24:50.83:1937,51,0	1/1:0,24:24:63.22:2393,63,0	1/1:6,18:24:48.16:1823,48,0	1/1:3,21:24:57.19:2089,57,0	1/1:1,16:17:45:1709,45,0	0/0:35,0:35:99:0,102,5745	0/0:30,0:30:87.28:0,87,5191	0/0:13,0:13:39.08:0,39,1906	0/0:22,0:22:63.22:0,63,3628	0/0:39,0:39:99:0,117,6541	0/0:22,0:22:63.22:0,63,3681	0/0:19,0:19:54.19:0,54,3235	0/0:36,0:36:99:0,108,6314	0/0:11,0:11:33.11:0,33,2047	0/0:20,0:20:60.17:0,60,3344	0/0:35,0:35:99:0,105,6230	0/0:6,0:6:18.06:0,18,1044
chr10	85276929	.	AAAAAAAAAAAC	A	4221.16	PASS	AB=0.880;AC=17;AF=0.304;AN=56;BaseQRankSum=3.777;DP=523;FS=2.047;HRun=0;HaplotypeScore=161.8665;InbreedingCoeff=0.6726;MQ=58.31;MQ0=19;MQRankSum=-1.869;QD=26.22;ReadPosRankSum=2.713;VQSLOD=4.0614;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:57.02:0,57,874	0/0:4,0:4:12.04:0,12,414	0/0:82,0:18:11.30:0,11,439	0/0:48,0:10:12.77:0,13,191	0/0:28,0:27:78.08:0,78,2185	0/0:17,0:17:45.15:0,45,1577	0/0:16,0:15:39.03:0,39,528	1/1:7,22:27:63.59:778,64,0	0/0:15,0:15:45.15:0,45,1798	0/0:15,0:13:33.11:0,33,886	0/0:16,0:16:45.15:0,45,1084	0/0:6,0:6:18.06:0,18,608	0/0:11,0:11:18.06:0,18,551	0/0:14,0:14:27.09:0,27,891	0/1:17,0:17:10.64:329,0,11	1/1:13,0:13:7.16:370,7,0	0/0:31,0:30:84.22:0,84,2352	0/1:17,0:16:97.27:107,0,97	0/1:11,14:21:20.17:827,0,20	1/1:4,5:6:15:295,15,0	1/1:8,1:8:8.43:127,8,0	0/0:3,0:3:9.02:0,9,191	0/0:10,0:9:27.09:0,27,796	0/0:4,0:4:5.65:0,6,123	0/0:14,0:14:39.09:0,39,1236	1/1:11,3:12:22.73:591,23,0	1/1:6,17:22:17.98:540,18,0	1/1:0,5:5:9.03:259,9,0
chr10	85276930	.	AAAAAAAAAAC	A	4146.69	PASS	AB=0.981;AC=18;AF=0.321;AN=56;BaseQRankSum=3.527;DP=522;FS=1.460;HRun=0;HaplotypeScore=154.6297;InbreedingCoeff=0.7510;MQ=58.32;MQ0=18;MQRankSum=-2.572;QD=25.92;ReadPosRankSum=2.014;VQSLOD=3.2636;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:45.72:0,46,644	0/0:4,0:4:12.04:0,12,369	0/0:82,0:19:4.87:0,5,395	0/0:48,0:9:14.15:0,14,211	0/0:28,0:27:78.01:0,78,1943	0/0:17,0:17:48.03:0,48,1437	0/0:16,0:15:21.39:0,21,375	1/1:27,0:25:58.77:618,59,0	0/0:15,0:15:45.15:0,45,1651	0/0:14,0:12:33.11:0,33,823	0/0:17,0:17:48.02:0,48,944	0/0:6,0:6:18.06:0,18,544	0/0:11,0:11:18.06:0,18,499	0/0:14,0:14:30.02:0,30,822	1/1:17,0:17:12.27:493,12,0	1/1:13,0:13:7.22:482,7,0	0/0:31,0:30:81.24:0,81,2066	0/1:17,0:16:47.04:197,0,47	0/1:24,1:21:8.01:710,0,8	1/1:9,0:6:15.01:237,15,0	1/1:9,0:8:8.55:108,9,0	0/0:3,0:3:9.02:0,9,168	0/0:10,0:9:27.09:0,27,700	0/0:4,0:4:5.51:0,6,112	0/0:14,0:14:39.08:0,39,1109	1/1:13,2:13:27.56:602,28,0	1/1:21,2:22:18.71:498,19,0	1/1:5,0:5:9.03:201,9,0
chr10	85276938	.	AAC	A	1221.50	PASS	AB=0.965;AC=19;AF=0.339;AN=56;BaseQRankSum=3.669;DP=487;FS=56.471;HRun=0;HaplotypeScore=104.6220;InbreedingCoeff=0.5211;MQ=59.66;MQ0=15;MQRankSum=-1.988;QD=7.10;ReadPosRankSum=-0.635;VQSLOD=0.9134;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:23.67:0,24,200	0/1:5,0:5:2.79:3,0,57	0/0:69,0:23:2.57:0,3,276	0/0:34,0:8:3.58:0,4,75	0/0:29,0:28:15.65:0,16,385	0/0:17,0:17:12.24:0,12,292	0/0:15,0:14:22.22:0,22,142	1/1:24,0:23:41.08:315,41,0	0/0:15,0:15:30.42:0,30,441	0/0:12,0:10:23.26:0,23,225	0/1:14,2:16:41.31:41,0,159	0/0:6,0:6:4.34:0,4,41	0/0:11,0:11:16.17:0,16,102	0/0:16,0:16:35.01:0,35,250	0/0:21,0:21:32.83:0,33,194	0/0:14,0:14:14.70:0,15,68	0/1:27,2:28:57.43:57,0,254	0/0:16,0:15:21.44:0,21,158	1/1:22,0:20:51.08:340,51,0	1/1:10,0:7:17.83:127,18,0	1/1:7,0:6:14.85:104,15,0	0/1:2,0:2:7.94:8,0,27	0/0:10,0:9:20.83:0,21,179	0/0:4,0:4:0.54:0,1,8	0/1:16,0:16:6.67:7,0,244	1/1:14,0:13:10.62:220,11,0	1/1:22,0:21:21.10:132,21,0	1/1:5,0:5:8.84:55,9,0
chr10	85277268	.	TAAAA	T	4714.24	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=8.564;DP=519;FS=7.912;HRun=15;HaplotypeScore=105.5306;InbreedingCoeff=0.9757;MQ=75.48;MQ0=2;MQRankSum=-2.122;QD=16.78;ReadPosRankSum=6.271;VQSLOD=2.3612;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:28:42.13:0,42,791	1/1:0,3:3:6.02:82,6,0	0/0:21,0:18:32.98:0,33,511	0/0:16,0:14:28.65:0,29,509	0/0:29,0:32:69.24:0,69,1380	0/0:19,0:23:63.20:0,63,1345	1/1:4,16:20:45.03:608,45,0	1/1:13,0:28:34.87:266,35,0	0/0:19,0:20:42.14:0,42,882	1/1:5,10:16:33.02:432,33,0	1/1:4,17:21:34.18:487,34,0	1/1:3,2:17:19.93:125,20,0	1/1:4,2:22:20.24:81,20,0	1/1:2,0:11:11.50:30,11,0	0/0:4,0:23:45.19:0,45,317	0/0:3,0:14:27.36:0,27,220	1/1:5,22:30:63.05:807,63,0	1/1:1,17:18:39.08:531,39,0	1/1:7,0:16:22.01:167,22,0	1/1:0,0:14:35.61:272,36,0	1/1:6,0:17:14.80:118,15,0	0/0:12,0:13:30.10:0,30,646	0/0:12,0:12:30.10:0,30,653	0/0:15,0:17:45.15:0,45,937	0/0:15,0:17:42.13:0,42,801	1/1:8,0:19:32.83:257,33,0	1/1:5,0:18:29.81:236,30,0	1/1:1,0:10:26.92:213,27,0
chr10	85278023	.	ATT	A	1272.17	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=2.827;DP=533;FS=1.814;HRun=13;HaplotypeScore=74.3832;InbreedingCoeff=0.9579;MQ=81.75;MQ0=2;MQRankSum=-0.877;QD=18.99;ReadPosRankSum=3.971;VQSLOD=3.2405;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:81.25:0,81,1103	1/1:2,5:9:14.44:111,14,0	0/0:53,0:23:30.91:0,31,345	0/0:33,0:19:16.08:0,16,159	0/0:25,0:25:57.15:0,57,768	0/0:16,0:18:47.63:0,48,627	0/0:3,0:18:42.07:0,42,416	0/0:31,0:31:76.92:0,77,995	0/0:16,0:16:39.09:0,39,538	1/1:3,11:15:38.79:360,39,0	1/1:4,14:18:38.96:378,39,0	0/0:10,0:10:30.10:0,30,434	0/0:14,0:14:32.31:0,32,423	0/0:6,0:8:17.03:0,17,191	0/0:3,0:13:9.98:0,10,34	0/0:1,0:13:29.82:0,30,103	1/1:5,20:25:60.05:582,60,0	0/0:4,0:17:27.05:0,27,271	0/0:21,1:23:24.05:0,24,639	0/0:17,0:17:41.92:0,42,557	0/0:8,0:9:23.57:0,24,312	0/0:12,0:13:32.60:0,33,442	0/0:14,0:14:39.13:0,39,554	0/0:18,0:20:59.26:0,59,782	0/0:18,0:20:53.65:0,54,714	0/0:19,0:24:55.80:0,56,674	0/0:19,0:19:51.14:0,51,701	0/0:4,0:4:9.03:0,9,130
chr10	85278166	.	G	GA	4261.61	PASS	AB=0.970;AC=27;AF=0.482;AN=56;BaseQRankSum=-4.670;DP=509;FS=2.167;HRun=9;HaplotypeScore=63.4079;InbreedingCoeff=0.8089;MQ=85.12;MQ0=0;MQRankSum=-0.534;QD=17.68;ReadPosRankSum=2.012;VQSLOD=5.1439;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,28:32:81.22:896,81,0	1/1:0,4:6:17.71:161,18,0	0/1:19,0:18:2.90:3,0,210	0/1:19,0:19:11.77:12,0,121	0/0:32,0:32:83.93:0,84,721	0/0:22,0:22:56.99:0,57,495	1/1:6,12:18:36.10:398,36,0	0/0:36,1:37:35.69:0,36,532	0/0:18,0:18:41.99:0,42,365	1/1:3,16:19:45.06:474,45,0	1/1:2,18:20:54.10:579,54,0	1/1:0,12:12:21.06:232,21,0	1/1:1,8:9:27.06:291,27,0	1/1:1,9:11:23.90:247,24,0	1/1:5,1:14:17.08:87,17,0	1/1:5,0:14:23.33:117,23,0	1/1:2,16:18:45.12:498,45,0	1/1:6,2:20:43.08:258,43,0	0/0:14,0:15:41.03:0,41,344	0/0:32,1:33:56.79:0,57,722	0/1:9,1:10:9.20:9,0,158	0/0:16,0:16:32.98:0,33,286	0/0:19,0:19:47.99:0,48,416	0/0:14,0:14:38.98:0,39,339	0/0:17,0:19:52.05:0,52,426	0/0:18,0:18:47.97:0,48,413	0/0:16,1:17:8.79:0,9,301	0/0:8,0:8:24:0,24,208
chr10	85279520	.	T	TA	8390.11	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=2.483;DP=642;FS=5.311;HRun=9;HaplotypeScore=96.9949;InbreedingCoeff=0.8316;MQ=73.32;MQ0=0;MQRankSum=-2.888;QD=17.33;ReadPosRankSum=-1.237;VQSLOD=4.4147;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:31:57.87:304,58,0	1/1:5,0:16:31.64:166,32,0	0/1:11,0:11:8.43:8,0,116	0/1:12,0:12:12.66:13,0,118	0/0:32,0:32:86.98:0,87,755	0/0:22,0:22:62.95:0,63,538	1/1:1,1:21:54.30:302,54,0	1/1:5,19:24:57.12:612,57,0	0/0:25,0:25:62.95:0,63,543	1/1:12,0:34:63.86:350,64,0	1/1:7,0:23:41.99:209,42,0	1/1:9,0:22:37.01:187,37,0	1/1:4,0:25:42.76:214,43,0	1/1:1,0:14:31.45:158,31,0	1/1:1,20:21:54.15:597,54,0	1/1:2,20:22:11.11:579,11,0	1/1:2,1:25:54.60:276,55,0	1/1:3,0:32:62.53:313,63,0	1/1:4,18:22:54.11:585,54,0	1/1:3,29:32:61.18:902,61,0	1/1:3,15:18:42.11:465,42,0	0/0:20,0:20:56.99:0,57,495	0/0:21,0:21:56.98:0,57,495	0/0:19,0:19:56.98:0,57,492	0/0:18,1:19:14.74:0,15,349	1/1:1,27:28:55.14:817,55,0	1/1:4,28:32:81.22:893,81,0	1/1:3,16:19:19.07:438,19,0
chr10	85279872	.	CT	C	1827.61	PASS	AB=0.906;AC=9;AF=0.161;AN=56;BaseQRankSum=11.272;DP=626;FS=9.084;HRun=9;HaplotypeScore=67.0599;InbreedingCoeff=0.9027;MQ=75.95;MQ0=2;MQRankSum=-0.799;QD=16.46;ReadPosRankSum=0.310;VQSLOD=3.1957;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.22:0,81,919	1/1:1,8:9:17.93:154,18,0	0/0:19,0:17:33.06:0,33,364	0/0:25,0:23:28.37:0,28,520	0/0:19,0:19:57.17:0,57,658	0/0:24,0:24:63.19:0,63,727	0/0:17,0:17:23.68:0,24,517	0/0:32,0:32:51.20:0,51,809	0/0:21,0:21:57.17:0,57,658	1/1:0,25:25:75.02:680,75,0	1/1:0,22:22:63.03:576,63,0	0/0:20,0:21:39.02:0,39,649	0/0:20,0:20:54.13:0,54,604	0/0:17,0:17:51.15:0,51,584	0/0:20,0:20:57.16:0,57,649	0/0:25,0:25:69.20:0,69,796	1/1:1,25:26:63.03:576,63,0	0/0:25,0:25:69.12:0,69,758	0/0:19,1:20:29.65:0,30,580	0/0:21,0:22:66.02:0,66,732	0/0:15,0:15:45.12:0,45,510	0/0:17,0:17:42.12:0,42,483	0/0:24,0:24:69.17:0,69,769	0/0:34,0:34:90.25:0,90,1028	0/0:16,1:17:20.63:0,21,457	0/1:26,3:29:3.31:3,0,698	0/0:28,0:28:50.86:0,51,829	0/0:24,0:22:66.17:0,66,741
chr10	85280617	.	A	AG	2475.61	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.896;DP=635;FS=2.606;HRun=2;HaplotypeScore=93.0081;InbreedingCoeff=0.9896;MQ=73.26;MQ0=0;MQRankSum=-2.063;QD=18.20;ReadPosRankSum=1.942;VQSLOD=4.0208;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:37,1:38:99:976,111,0	0/0:12,0:12:33.10:0,33,408	0/0:17,0:15:11.36:0,11,373	0/0:20,0:19:39.65:0,40,305	0/0:20,0:20:60.19:0,60,737	0/0:19,0:19:56.39:0,56,609	1/1:34,0:34:44.24:213,44,0	0/0:15,0:15:39.06:0,39,446	0/0:23,0:23:69.20:0,69,841	0/0:19,0:19:54.17:0,54,669	0/0:16,0:16:45.12:0,45,535	1/1:23,0:23:65.98:571,66,0	1/1:20,1:21:59.94:527,60,0	1/1:20,0:20:41.99:364,42,0	0/0:19,0:19:31.65:0,32,185	0/0:14,0:14:36.89:0,37,191	0/0:55,0:55:99:0,156,1905	0/0:42,0:42:77.97:0,78,447	0/0:20,0:20:54.13:0,54,617	0/0:20,0:20:59.84:0,60,701	0/0:33,2:34:51.89:0,52,1021	0/0:16,0:16:42.12:0,42,510	0/0:19,0:19:44.10:0,44,598	0/0:39,0:39:99:0,117,1390	0/0:10,0:10:30.09:0,30,371	0/0:21,0:21:60.18:0,60,732	0/0:20,0:20:60.15:0,60,707	0/0:7,0:7:18.06:0,18,221
chr10	85280619	.	G	GAA	5861.57	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=7.036;DP=646;FS=2.846;HRun=8;HaplotypeScore=93.3835;InbreedingCoeff=0.9979;MQ=73.23;MQ0=0;MQRankSum=-2.702;QD=26.89;ReadPosRankSum=1.832;VQSLOD=4.8291;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:38:99:1281,102,0	0/0:11,0:11:33.09:0,33,368	0/0:17,0:16:36.96:0,37,386	0/0:20,0:19:26.58:0,27,266	0/0:21,0:21:60.15:0,60,669	0/0:20,0:20:45.10:0,45,501	1/1:2,0:34:74.86:258,75,0	0/0:14,0:15:35.82:0,36,373	0/0:24,0:24:69.14:0,69,748	0/0:19,0:19:54.13:0,54,602	0/0:16,0:16:42.09:0,42,459	1/1:0,0:23:66.20:781,66,0	1/1:2,0:22:49.90:698,50,0	1/1:0,0:24:42.12:484,42,0	1/1:3,13:16:24.08:381,24,0	1/1:2,15:18:33.11:524,33,0	0/0:57,0:57:99:0,156,1727	1/1:5,35:43:97.79:1454,98,0	0/0:19,0:19:45.09:0,45,497	0/0:20,0:20:54.13:0,54,602	0/0:34,0:33:86.79:0,87,936	0/0:15,0:15:39.08:0,39,426	0/0:17,0:18:39.03:0,39,493	0/0:41,0:41:99:0,105,1170	0/0:11,0:11:30.07:0,30,334	0/0:22,0:22:63.15:0,63,693	0/0:20,0:20:51.12:0,51,569	0/0:6,0:6:18.05:0,18,201
chr10	85281891	.	A	AT	472.11	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.848;DP=657;FS=1.790;HRun=9;HaplotypeScore=65.8521;InbreedingCoeff=0.9616;MQ=76.98;MQ0=0;MQRankSum=-3.433;QD=22.48;ReadPosRankSum=-2.412;VQSLOD=3.6589;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,129,1120	0/0:8,0:8:20.99:0,21,182	0/0:17,0:17:35.65:0,36,280	0/0:15,0:15:11.37:0,11,132	0/0:31,0:31:80.97:0,81,703	0/0:31,0:31:56.68:0,57,653	1/1:2,19:21:52.38:567,52,0	0/0:28,0:28:71.97:0,72,625	0/0:28,0:28:74.98:0,75,651	0/0:28,0:28:77.98:0,78,677	0/0:19,0:19:44.98:0,45,391	0/0:21,0:21:53.98:0,54,469	0/0:21,0:21:50.97:0,51,443	0/0:18,0:18:38.97:0,39,338	0/0:38,0:38:98.84:0,99,854	0/0:25,1:26:35.78:0,36,536	0/0:24,0:23:56.98:0,57,495	0/0:26,0:26:65.98:0,66,573	0/0:19,0:19:41.96:0,42,359	0/0:28,0:28:77.98:0,78,677	0/0:18,0:18:47.99:0,48,417	0/0:17,0:17:44.99:0,45,391	0/0:22,0:22:56.98:0,57,495	0/0:13,0:13:38.99:0,39,339	0/0:18,0:19:50.03:0,50,423	0/0:35,0:35:59.66:0,60,671	0/0:23,0:23:59.98:0,60,521	0/0:16,0:16:44.97:0,45,386
chr10	85282233	.	G	GAT	1745.19	PASS	AB=1.000;AC=19;AF=0.365;AN=52;BaseQRankSum=-5.599;DP=486;FS=2.881;HRun=0;HaplotypeScore=70.2690;InbreedingCoeff=0.6670;MQ=84.71;MQ0=3;MQRankSum=-1.320;QD=13.32;ReadPosRankSum=2.015;VQSLOD=3.4867;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:3.25:4,0,3	./.	0/0:15,0:16:27.04:0,27,296	0/1:18,0:18:9.19:9,0,263	0/0:24,0:24:51.16:0,51,648	0/0:18,0:18:54.16:0,54,673	./.	0/0:35,0:35:69.21:0,69,867	0/0:27,0:27:78.25:0,78,993	1/1:6,0:6:3.01:48,3,0	1/1:2,0:2:3.01:47,3,0	1/1:4,0:4:3:25,3,0	1/1:8,0:8:3:26,3,0	1/1:2,0:2:3.01:47,3,0	1/1:4,19:23:51.17:854,51,0	1/1:3,18:18:45.15:753,45,0	1/1:14,0:14:9.01:99,9,0	0/0:18,0:18:45.14:0,45,572	0/0:18,0:18:42.13:0,42,535	0/0:37,0:37:72.22:0,72,902	0/0:12,0:12:30.10:0,30,382	0/0:21,0:21:54.16:0,54,675	0/0:30,0:30:72.23:0,72,917	0/0:25,0:25:60.19:0,60,764	0/0:39,0:39:99:0,99,1259	0/1:19,0:19:1.01:1,0,477	0/0:20,0:20:54.16:0,54,671	0/0:11,0:11:33.06:0,33,376
chr10	85282244	.	ACTGT	A	127.50	PASS	AC=14;AF=0.269;AN=52;BaseQRankSum=5.905;DP=432;FS=2.204;HRun=0;HaplotypeScore=81.6793;InbreedingCoeff=0.7376;MQ=82.90;MQ0=3;MQRankSum=0.073;QD=4.25;ReadPosRankSum=-3.146;VQSLOD=1.2442;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,2:11:12.09:152,12,0	./.	0/0:16,0:17:1.88:0,2,644	0/0:11,0:11:22.67:0,23,611	0/0:19,0:19:54.19:0,54,1524	0/0:22,0:22:66.23:0,66,1869	./.	0/0:25,0:25:75.26:0,75,2083	0/0:27,0:27:81.28:0,81,2308	1/1:1,0:1:2.99:23,3,0	1/1:1,0:1:2.98:22,3,0	1/1:0,0:1:2.94:18,3,0	1/1:0,2:7:2.90:16,3,0	1/1:1,0:1:2.98:22,3,0	0/0:20,0:20:57.20:0,57,1189	0/0:21,0:18:51.09:0,51,1026	1/1:1,7:8:2.98:22,3,0	0/0:19,0:19:54.19:0,54,1520	0/0:18,0:18:54.19:0,54,1526	0/0:31,0:31:93.32:0,93,2601	0/0:12,0:12:36.12:0,36,1043	0/0:20,0:20:57.18:0,57,1590	0/0:28,0:28:84.29:0,84,2381	0/0:23,0:23:69.24:0,69,1983	0/0:37,0:37:99:0,108,3080	0/0:18,0:19:33.97:0,34,1484	0/0:21,0:21:63.22:0,63,1785	0/0:11,0:11:33.06:0,33,722
chr10	85282429	.	CGTGA	C	6982.72	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.360;DP=542;FS=17.703;HRun=0;HaplotypeScore=94.4132;InbreedingCoeff=0.9598;MQ=94.03;MQ0=0;MQRankSum=-4.883;QD=45.64;ReadPosRankSum=1.846;VQSLOD=4.3442;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,2762	0/0:6,0:6:18.06:0,18,454	0/0:27,0:26:75.26:0,75,1832	0/0:24,0:24:56.56:0,57,1381	0/0:19,0:19:54.16:0,54,1388	0/0:31,0:31:87.30:0,87,2377	0/0:17,0:17:51.17:0,51,1306	1/1:3,30:33:90.24:1560,90,0	0/0:26,0:26:75.24:0,75,1924	0/0:8,0:8:24.08:0,24,657	0/0:4,0:4:12.04:0,12,296	0/0:11,0:11:33.11:0,33,828	0/0:21,0:21:60.21:0,60,1636	0/0:10,0:10:24.08:0,24,657	0/0:20,0:20:54.19:0,54,1467	0/0:15,0:15:45.15:0,45,1224	0/0:24,0:24:66.21:0,66,1730	0/0:27,0:27:78.23:0,78,2027	1/1:4,15:19:45.15:866,45,0	1/1:1,24:25:51.17:986,51,0	1/1:2,31:33:68.82:1335,69,0	0/0:10,0:10:30.10:0,30,810	0/0:18,0:18:51.17:0,51,1262	0/0:20,0:20:54.19:0,54,1446	0/0:15,0:15:45.15:0,45,1219	1/1:1,22:23:68.94:1248,69,0	1/1:0,16:17:48.16:929,48,0	1/1:0,3:3:3.01:58,3,0
chr10	85282596	.	TG	T	856.27	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.467;DP=535;FS=3.283;HRun=7;HaplotypeScore=64.1380;InbreedingCoeff=0.9746;MQ=80.43;MQ0=0;MQRankSum=-0.725;QD=19.91;ReadPosRankSum=2.091;VQSLOD=3.3867;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.17:0,69,826	0/0:9,0:9:26.82:0,27,218	0/0:17,0:16:41.77:0,42,454	0/0:15,0:15:33.06:0,33,386	0/0:19,0:19:48.12:0,48,568	0/0:19,0:19:51.16:0,51,640	0/0:10,0:10:26.50:0,27,337	0/0:23,0:23:50.80:0,51,574	0/0:20,0:20:54.15:0,54,652	0/0:22,0:22:56.26:0,56,412	0/0:12,0:12:29.84:0,30,231	0/0:15,0:15:45.13:0,45,552	0/0:16,0:16:48.13:0,48,587	0/0:16,0:16:45.14:0,45,565	1/1:1,22:23:54.12:551,54,0	1/1:2,18:20:10.38:421,10,0	0/0:31,0:31:80.36:0,80,569	0/0:21,0:21:59.85:0,60,711	0/0:22,0:22:51.14:0,51,616	0/0:28,0:28:75.20:0,75,939	0/0:27,0:27:66.21:0,66,830	0/0:18,0:18:42.03:0,42,503	0/0:12,0:12:33.11:0,33,414	0/0:24,0:24:63.20:0,63,789	0/0:19,0:19:51.12:0,51,616	0/0:15,0:15:39.11:0,39,478	0/0:27,0:27:69.66:0,70,839	0/0:9,0:9:27.07:0,27,326
chr10	85283154	.	GTA	G	273.67	PASS	AB=0.992;AC=11;AF=0.458;AN=24;BaseQRankSum=-1.763;DP=123;FS=3.041;HRun=0;HaplotypeScore=114.5944;InbreedingCoeff=0.3699;MQ=112.19;MQ0=3;MQRankSum=-1.422;QD=3.55;ReadPosRankSum=-0.057;VQSLOD=2.7337;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:3,0:3:0:0,0,0	0/1:16,0:9:14.47:14,0,121	0/1:41,0:28:22.90:23,0,115	0/0:10,0:10:2.20:0,2,8	1/1:3,1:4:11.87:80,12,0	./.	./.	1/1:2,1:3:8.90:60,9,0	1/1:4,0:4:9.34:58,9,0	0/0:3,0:3:0:0,0,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/0:6,0:6:9.02:0,9,91	0/0:5,0:5:3.48:0,3,31	./.	0/0:11,0:11:15.03:0,15,150	1/1:1,3:4:12:144,12,0	./.	./.
chr10	85283180	.	ATACT	A	73.96	PASS	AB=0.987;AC=6;AF=0.300;AN=20;BaseQRankSum=-1.085;DP=186;FS=1.412;HRun=0;HaplotypeScore=143.3159;InbreedingCoeff=0.1711;MQ=111.87;MQ0=8;MQRankSum=0.266;QD=1.42;ReadPosRankSum=-2.785;VQSLOD=2.2377;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:36,0:18:38.77:39,0,126	0/0:82,0:46:0.72:0,1,412	0/0:12,0:10:0.84:0,1,3	./.	./.	./.	./.	1/1:1,1:2:6.02:98,6,0	0/0:1,1:2:0.47:0,0,1	./.	./.	./.	./.	./.	./.	./.	./.	1/1:9,0:9:3.85:11,4,0	./.	0/0:5,0:4:8.88:0,9,57	0/0:6,1:7:5.27:0,5,26	./.	0/0:11,0:11:11.35:0,11,78	0/1:3,0:3:14.04:14,0,22	./.	./.
chr10	85284248	.	C	CGT	2264.56	PASS	AB=0.710;AC=12;AF=0.214;AN=56;BaseQRankSum=-2.431;DP=555;FS=1.742;HRun=0;HaplotypeScore=78.1081;InbreedingCoeff=0.3347;MQ=60.28;MQ0=11;MQRankSum=4.218;QD=11.86;ReadPosRankSum=0.941;VQSLOD=3.5122;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:16,25:45:63.72:884,0,64	0/1:3,3:6:28.81:41,0,29	0/0:23,0:9:5.01:0,5,53	0/0:27,0:11:16.54:0,17,182	0/0:16,0:18:26.91:0,27,291	0/0:12,0:13:29.92:0,30,327	0/0:13,0:14:26.90:0,27,281	0/0:19,0:21:7.97:0,8,266	0/0:13,0:13:15.81:0,16,273	0/1:11,9:19:74.37:298,0,74	1/1:6,5:12:15.05:234,15,0	0/0:5,0:22:39.53:0,40,192	0/0:4,0:16:36.93:0,37,182	0/0:3,0:14:25.32:0,25,122	1/1:3,0:12:23.92:210,24,0	0/1:4,1:11:13.82:157,0,14	0/1:21,12:34:99:236,0,256	1/1:8,2:27:38.50:362,38,0	0/0:21,0:19:27.06:0,27,302	0/0:14,0:14:26.83:0,27,277	0/0:30,0:33:65.68:0,66,701	0/0:13,0:13:23.74:0,24,254	0/0:13,0:13:21.02:0,21,219	0/0:28,0:27:8.16:0,8,616	0/0:25,0:26:50.98:0,51,570	0/1:21,1:24:8.13:8,0,322	0/0:15,0:15:27.08:0,27,313	0/0:16,0:18:38.90:0,39,395
chr10	85285359	.	CTTGTGTGTGTGTGTGT	C	3908.80	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=9.059;DP=590;FS=0.996;HRun=0;HaplotypeScore=213.6335;InbreedingCoeff=0.8569;MQ=66.29;MQ0=12;MQRankSum=0.857;QD=21.13;ReadPosRankSum=-1.084;VQSLOD=2.6667;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:32:46.20:46,0,451	0/0:10,0:10:30.03:0,30,834	0/0:31,0:21:46.38:0,46,529	0/0:26,0:15:14.71:0,15,297	0/0:23,0:23:63.14:0,63,2687	0/0:17,0:17:48:0,48,1467	0/0:23,0:21:38.68:0,39,522	1/1:9,0:23:57.38:429,57,0	0/0:19,0:19:57.07:0,57,2322	0/0:24,0:24:72.15:0,72,2346	0/0:10,0:10:24.01:0,24,512	0/0:16,0:16:32.86:0,33,1249	0/0:13,0:13:34.85:0,35,1051	0/0:22,0:21:63.12:0,63,1943	0/0:24,0:23:60.01:0,60,2372	0/0:19,0:19:54.08:0,54,1839	0/0:34,0:34:99:0,102,3757	0/0:23,0:19:52.70:0,53,1156	1/1:0,12:12:35.58:790,36,0	1/1:0,22:22:18.06:824,18,0	1/1:2,0:37:3.01:35,3,0	0/0:17,0:17:45.08:0,45,1792	0/0:6,0:6:9.02:0,9,413	0/0:32,0:31:72.09:0,72,3171	0/0:16,0:16:48.07:0,48,1737	1/1:0,14:14:35.16:479,35,0	1/1:2,24:26:13.83:445,14,0	1/1:0,16:16:18.06:861,18,0
chr10	85285360	.	TTG	T	649.81	PASS	AB=0.958;AC=27;AF=0.540;AN=50;BaseQRankSum=5.344;DP=596;FS=1.756;HRun=0;HaplotypeScore=95.8120;InbreedingCoeff=0.3938;MQ=64.92;MQ0=13;MQRankSum=-3.250;QD=1.91;ReadPosRankSum=1.525;VQSLOD=1.8559;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:32:5.68:28,6,0	0/0:11,0:11:3.01:0,3,44	0/0:31,0:21:0:0,0,0	./.	0/0:24,0:24:18.93:0,19,289	0/1:17,0:17:22.73:23,0,79	1/1:19,0:20:2.84:14,3,0	./.	0/0:18,0:18:15.05:0,15,218	0/1:27,0:27:18.95:26,0,19	1/1:10,0:10:3:28,3,0	0/0:16,0:17:11.85:0,12,134	1/1:8,4:12:5.30:63,5,0	1/1:20,1:21:14.87:140,15,0	1/1:20,3:22:11.92:127,12,0	0/1:14,4:18:31.87:84,0,32	0/1:33,1:35:7.81:8,0,271	0/0:23,0:21:9.40:0,9,69	1/1:12,0:12:11.36:56,11,0	1/1:22,0:22:14.29:65,14,0	./.	0/0:17,0:17:11.39:0,11,108	0/0:4,2:5:3.01:0,3,36	0/1:32,0:31:4.37:4,0,318	0/0:18,0:18:15.04:0,15,192	1/1:14,0:14:5.68:28,6,0	1/1:26,0:26:8.52:42,9,0	1/1:16,0:16:17.04:84,17,0
chr10	85286219	.	CT	C	12900.20	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=20.102;DP=751;FS=0.000;HRun=3;HaplotypeScore=135.8910;InbreedingCoeff=0.9978;MQ=81.95;MQ0=0;MQRankSum=-5.750;QD=33.59;ReadPosRankSum=-0.991;VQSLOD=3.5351;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,160,2289	1/1:0,5:5:15.05:186,15,0	0/0:20,0:20:60.19:0,60,812	0/0:22,0:22:57.11:0,57,746	0/0:28,0:28:84.25:0,84,1172	0/0:30,0:30:90.27:0,90,1259	1/1:3,29:32:81.25:1004,81,0	1/1:1,25:26:75.24:930,75,0	0/0:28,0:28:84.25:0,84,1172	1/1:4,21:25:63.20:781,63,0	1/1:3,19:22:51.16:632,51,0	0/0:22,0:22:66.21:0,66,929	0/0:27,0:27:78.25:0,78,1104	0/0:37,0:37:99:0,105,1511	1/1:2,40:42:99:1488,120,0	1/1:1,30:31:81.25:1004,81,0	1/1:2,25:27:72.23:892,72,0	1/1:0,27:27:69.22:855,69,0	1/1:1,26:27:78.24:964,78,0	1/1:0,33:33:99:1227,99,0	1/1:1,28:29:81.25:1004,81,0	0/0:23,0:23:69.23:0,69,994	0/0:20,0:20:57.18:0,57,805	0/0:29,0:29:84.27:0,84,1192	0/0:27,0:27:78.26:0,78,1123	1/1:1,25:26:69.22:855,69,0	1/1:1,18:19:48.15:595,48,0	1/1:0,13:13:39.12:483,39,0
chr10	85286475	.	CAGGGTGATACTTG	C	5665.22	PASS	AB=0.974;AC=11;AF=0.196;AN=56;BaseQRankSum=3.181;DP=711;FS=1.138;HRun=0;HaplotypeScore=309.0921;InbreedingCoeff=0.8980;MQ=86.29;MQ0=0;MQRankSum=-10.422;QD=51.04;ReadPosRankSum=2.950;VQSLOD=3.8091;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,5275	1/1:2,9:11:21.07:859,21,0	0/0:26,0:26:75.23:0,75,4002	0/0:29,0:29:78.27:0,78,3953	0/0:25,0:25:72.25:0,72,4532	0/0:31,0:31:93.32:0,93,5770	0/0:31,0:31:93.32:0,93,4833	0/0:31,0:31:93.31:0,93,3916	0/0:19,0:19:57.20:0,57,3624	1/1:2,16:18:48.16:1887,48,0	1/1:1,11:13:30.06:1035,30,0	0/0:18,0:18:54.19:0,54,3055	0/0:24,0:24:72.25:0,72,4023	0/0:28,0:28:84.29:0,84,4496	0/0:36,0:36:99:0,108,5224	0/0:26,0:26:75.26:0,75,3603	1/1:3,10:13:21.07:770,21,0	1/1:5,12:17:27.09:1105,27,0	0/0:21,0:21:54.18:0,54,2422	0/0:34,0:34:99:0,102,4820	0/0:35,0:35:99:0,105,4795	0/0:29,0:29:87.30:0,87,5538	0/0:24,0:24:69.22:0,69,4341	0/0:41,0:41:99:0,117,7605	0/0:27,0:27:78.25:0,78,4821	0/1:37,1:38:8.40:8,0,4972	0/0:16,0:16:45.15:0,45,2199	0/0:11,0:11:33.11:0,33,1432
chr10	85287357	.	G	GGGAGA	26978.81	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-11.911;DP=614;FS=9.957;HRun=0;HaplotypeScore=111.2008;InbreedingCoeff=0.9742;MQ=72.29;MQ0=0;MQRankSum=-9.858;QD=64.08;ReadPosRankSum=-0.689;VQSLOD=5.6137;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,22:31:63.01:1868,63,0	1/1:0,5:5:15.02:387,15,0	0/0:12,0:12:33.11:0,33,624	0/0:14,0:14:5.15:0,5,494	0/0:12,0:12:27.09:0,27,552	0/0:18,0:18:54.19:0,54,1108	1/1:3,23:26:63.18:1842,63,0	1/1:11,19:33:75.21:1939,75,0	0/0:30,0:30:78.27:0,78,1600	1/1:2,21:25:66.23:1959,66,0	1/1:1,11:13:30.10:899,30,0	1/1:6,25:31:69.24:2094,69,0	1/1:5,17:23:51.18:1537,51,0	1/1:3,18:22:57.20:1673,57,0	0/0:19,0:19:48.16:0,48,985	0/0:16,0:16:42.13:0,42,820	1/1:7,29:38:81.28:2417,81,0	1/1:10,27:39:84.29:2563,84,0	1/1:7,14:22:48.16:1407,48,0	1/1:6,11:19:33.11:1001,33,0	1/1:11,42:53:83.94:2543,84,0	0/0:13,0:13:36.12:0,36,739	0/0:8,0:8:18.06:0,18,345	0/0:32,0:32:87.27:0,87,1700	0/0:19,0:19:48.16:0,48,985	1/1:3,15:19:51.16:1483,51,0	1/1:3,13:16:33.11:1006,33,0	1/1:1,4:5:12.04:362,12,0
chr10	85287538	.	GT	G	10402.21	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=17.768;DP=584;FS=3.833;HRun=2;HaplotypeScore=114.2201;InbreedingCoeff=0.9692;MQ=77.87;MQ0=0;MQRankSum=-8.282;QD=27.23;ReadPosRankSum=3.160;VQSLOD=4.5929;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,41:47:99:1295,117,0	1/1:0,6:6:18.05:201,18,0	0/0:21,0:21:60.20:0,60,891	0/0:15,0:15:42.84:0,43,571	0/0:29,0:29:87.28:0,87,1281	0/0:21,0:21:63.21:0,63,944	1/1:17,0:17:2.88:15,3,0	1/1:3,10:13:30.07:327,30,0	0/0:21,0:21:63.13:0,63,896	1/1:2,26:28:75.18:826,75,0	1/1:2,13:15:42.10:459,42,0	1/1:1,15:16:42.12:468,42,0	1/1:0,16:16:45.13:502,45,0	1/1:0,14:14:39.11:436,39,0	1/1:1,17:18:51.14:570,51,0	1/1:1,20:21:51.14:569,51,0	1/1:2,31:34:81.23:906,81,0	1/1:3,25:28:69.19:769,69,0	1/1:3,13:16:39.08:423,39,0	1/1:1,18:19:45.13:503,45,0	1/1:2,30:32:78.18:872,78,0	0/0:13,0:13:39.13:0,39,583	0/0:20,0:20:60.19:0,60,878	0/0:35,0:35:99:0,99,1438	0/0:27,0:27:81.26:0,81,1176	1/1:1,16:17:48.09:522,48,0	1/1:1,18:19:51.14:570,51,0	1/1:1,5:6:15.04:168,15,0
chr10	85287540	.	TC	T	10449.84	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=18.026;DP=599;FS=3.806;HRun=3;HaplotypeScore=117.9993;InbreedingCoeff=0.9692;MQ=77.13;MQ0=0;MQRankSum=-7.745;QD=26.52;ReadPosRankSum=3.252;VQSLOD=4.2667;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:49,0:49:99:1295,117,0	1/1:6,0:6:18.05:201,18,0	0/0:22,0:22:66.19:0,66,893	0/0:14,0:14:38.44:0,38,497	0/0:31,0:31:93.27:0,93,1276	0/0:21,0:21:63.21:0,63,907	1/1:1,16:17:3.01:35,3,0	1/1:15,0:15:30.07:327,30,0	0/0:21,0:21:60.20:0,60,863	1/1:29,0:29:78.18:854,78,0	1/1:14,0:14:42.10:459,42,0	1/1:18,0:18:42.11:468,42,0	1/1:17,0:17:45.13:502,45,0	1/1:15,0:15:39.11:436,39,0	1/1:22,0:22:51.14:570,51,0	1/1:21,0:21:51.14:569,51,0	1/1:34,0:34:81.23:906,81,0	1/1:28,0:28:69.19:769,69,0	1/1:14,0:14:39.08:423,39,0	1/1:19,0:19:45.13:503,45,0	1/1:33,0:33:78.18:872,78,0	0/0:14,0:14:42.12:0,42,584	0/0:21,0:21:63.20:0,63,887	0/0:34,0:34:96.31:0,96,1360	0/0:27,0:27:81.27:0,81,1165	1/1:18,0:18:48.09:522,48,0	1/1:19,0:19:51.14:570,51,0	1/1:6,0:6:15.04:168,15,0
chr10	85287659	.	CCATA	C	3664.05	PASS	AB=0.947;AC=28;AF=0.519;AN=54;BaseQRankSum=-0.826;DP=519;FS=7.870;HRun=0;HaplotypeScore=90.9637;InbreedingCoeff=0.3191;MQ=79.00;MQ0=5;MQRankSum=-0.624;QD=12.59;ReadPosRankSum=0.808;VQSLOD=2.5629;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:68.76:0,69,715	1/1:3,0:3:2.72:45,3,0	0/0:35,0:26:0.21:0,0,474	0/0:45,0:38:70.13:0,70,765	0/0:11,0:11:23.89:0,24,194	0/0:17,0:17:11.54:0,12,222	0/1:19,0:19:10.10:224,0,10	1/1:20,0:20:44.97:387,45,0	0/0:11,0:11:29.84:0,30,286	0/1:5,14:19:7.12:279,0,7	./.	0/1:12,0:12:3.93:141,0,4	0/1:16,0:16:91.47:192,0,91	0/1:14,0:14:46.07:179,0,46	1/1:16,0:15:28.80:230,29,0	0/1:16,0:16:79.31:113,0,79	1/1:5,29:32:24.08:420,24,0	0/1:25,0:24:99:207,0,210	1/1:18,0:17:47.54:401,48,0	1/1:3,10:13:3.01:53,3,0	1/1:14,2:16:38.95:369,39,0	0/0:17,0:16:22.58:0,23,327	0/0:11,0:11:5.52:0,6,192	0/0:45,0:45:28.58:0,29,717	0/1:16,0:16:1.57:2,0,272	1/1:2,13:15:38.90:334,39,0	1/1:14,0:14:3.01:38,3,0	1/1:0,5:4:3.01:52,3,0
chr10	85287666	.	TACATAC	T	2583.65	PASS	AB=0.963;AC=26;AF=0.481;AN=54;BaseQRankSum=-2.334;DP=546;FS=11.626;HRun=0;HaplotypeScore=116.0026;InbreedingCoeff=0.0274;MQ=70.46;MQ0=9;MQRankSum=-1.116;QD=7.93;ReadPosRankSum=0.406;VQSLOD=1.8853;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:71.76:0,72,836	1/1:5,0:5:0.64:1,1,0	0/0:33,0:24:0.21:0,0,474	0/0:38,0:31:70.13:0,70,765	0/1:11,0:11:5.30:5,0,216	0/0:18,0:17:3.45:0,3,307	0/1:21,0:21:78.72:199,0,79	1/1:16,0:16:44.97:387,45,0	0/1:16,0:16:1.53:2,0,324	0/1:17,0:17:81.30:167,0,81	./.	0/1:19,0:19:67.86:137,0,68	0/1:20,0:20:99:175,0,211	0/1:14,0:14:99:152,0,163	0/1:21,0:20:99:184,0,197	0/1:17,0:17:94.88:95,0,181	1/1:36,0:34:17.39:65,17,0	0/1:31,0:30:99:203,0,451	1/1:18,1:18:47.54:433,48,0	1/1:11,0:11:2.37:8,2,0	1/1:17,0:16:18.48:238,18,0	0/0:17,0:16:43.71:0,44,463	0/0:12,0:12:29.61:0,30,242	0/0:44,0:44:99:0,101,1054	0/0:17,0:17:41.52:0,42,467	0/1:15,0:14:6.49:227,0,6	0/1:3,11:14:28.95:64,0,29	1/1:5,0:4:2.37:8,2,0
chr10	85287668	.	CAT	C	3542.82	PASS	AB=1.000;AC=32;AF=0.593;AN=54;BaseQRankSum=1.275;DP=566;FS=13.166;HRun=0;HaplotypeScore=85.3559;InbreedingCoeff=0.4723;MQ=65.81;MQ0=9;MQRankSum=0.227;QD=10.06;ReadPosRankSum=0.563;VQSLOD=2.4746;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:35.97:0,36,562	1/1:5,0:5:2.55:13,3,0	0/0:30,0:21:0.21:0,0,474	0/0:36,0:29:70.14:0,70,765	0/0:12,0:12:7.24:0,7,144	0/0:19,0:18:17.85:0,18,207	1/1:24,0:24:31.04:278,31,0	1/1:16,0:16:44.97:387,45,0	0/1:15,0:15:22.09:22,0,207	1/1:17,0:17:17.39:237,17,0	./.	1/1:20,0:20:22.83:188,23,0	0/1:22,0:22:14.83:216,0,15	1/1:16,0:16:20.63:211,21,0	1/1:21,0:20:39.63:324,40,0	1/1:18,0:18:3.12:148,3,0	0/1:38,0:36:2.89:157,0,3	1/1:33,0:32:30.91:314,31,0	1/1:22,0:19:50.37:400,50,0	1/1:12,0:12:2.97:20,3,0	1/1:18,0:17:22.14:286,22,0	0/0:17,0:16:27.94:0,28,294	0/0:13,0:13:23.96:0,24,202	0/0:45,0:45:56.44:0,56,606	0/1:18,0:18:11.40:11,0,185	1/1:15,0:14:9.84:270,10,0	0/1:15,0:15:2.77:37,0,3	0/1:7,0:6:7.12:24,0,7
chr10	85287670	.	TAC	T	713.06	PASS	AB=0.971;AC=22;AF=0.440;AN=50;BaseQRankSum=1.357;DP=587;FS=11.491;HRun=0;HaplotypeScore=97.0049;InbreedingCoeff=0.0182;MQ=63.47;MQ0=12;MQRankSum=1.063;QD=2.25;ReadPosRankSum=2.760;VQSLOD=0.5363;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:0.88:0,1,69	0/1:6,0:6:3.91:4,0,19	./.	./.	1/1:14,0:13:5.83:56,6,0	1/1:16,4:19:8.77:84,9,0	0/0:23,0:23:2.54:0,3,24	0/0:18,0:18:6.84:0,7,29	0/1:19,0:18:23.30:135,0,23	0/1:17,0:17:2.09:2,0,65	./.	0/0:20,0:20:3:0,3,26	0/0:22,0:22:9.02:0,9,103	0/0:15,0:15:8.79:0,9,64	0/1:22,0:21:6.69:7,0,60	0/1:16,0:16:9.38:9,0,66	0/1:41,0:39:83.65:98,0,84	0/0:32,0:31:15.10:0,15,170	0/1:21,0:18:6.12:6,0,40	1/1:12,0:12:2.22:7,2,0	0/0:23,0:21:2.53:0,3,91	1/1:16,0:16:9.33:80,9,0	0/1:9,5:15:25.85:37,0,26	1/1:33,11:47:20.54:171,21,0	1/1:12,5:17:4.54:144,5,0	0/1:17,0:16:10.53:11,0,34	0/1:16,0:16:9.29:9,0,47	0/0:7,0:6:0.60:0,1,38
chr10	85287718	.	C	CACAT	1087.55	PASS	AB=0.519;AC=14;AF=0.250;AN=56;BaseQRankSum=3.186;DP=589;FS=0.000;HRun=0;HaplotypeScore=99.0977;InbreedingCoeff=0.7493;MQ=71.58;MQ0=11;MQRankSum=-2.078;QD=5.88;ReadPosRankSum=1.703;VQSLOD=1.4550;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:28:5.96:47,6,0	0/0:11,0:11:23.65:0,24,163	0/0:29,0:17:24.28:0,24,295	0/0:37,0:28:61.21:0,61,498	0/0:16,0:16:32.18:0,32,218	0/0:17,0:16:35.79:0,36,306	0/1:1,0:27:0:0,0,0	0/0:17,0:17:26.01:0,26,257	0/0:21,0:20:52.64:0,53,412	0/0:24,0:24:55.75:0,56,461	0/0:11,0:11:17.88:0,18,130	1/1:2,0:15:5.97:58,6,0	0/1:2,0:18:29.23:29,0,49	1/1:0,0:17:6.49:83,6,0	1/1:31,1:31:72.69:762,73,0	1/1:1,20:23:3.37:152,3,0	0/0:41,0:40:93.92:0,94,884	1/1:2,0:24:6.31:118,6,0	0/0:19,0:18:42.51:0,43,285	0/0:14,0:14:17.94:0,18,168	0/0:25,0:24:65.61:0,66,555	0/0:12,0:11:29.54:0,30,238	0/0:12,0:12:22.10:0,22,191	0/0:36,0:36:62.83:0,63,609	0/0:17,0:17:40.85:0,41,425	0/0:18,0:17:44.30:0,44,350	0/0:12,0:12:17.57:0,18,107	0/0:15,0:14:31.50:0,31,253
chr10	85287977	.	CACAG	C	2537.20	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=6.668;DP=771;FS=5.254;HRun=0;HaplotypeScore=140.9241;InbreedingCoeff=0.8428;MQ=61.24;MQ0=9;MQRankSum=0.428;QD=17.26;ReadPosRankSum=1.875;VQSLOD=3.1609;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,31:52:60.20:936,60,0	0/0:2,0:6:9.02:0,9,129	./.	0/0:45,0:28:0.47:0,0,1	0/0:20,0:20:27.09:0,27,637	0/0:20,0:20:30.10:0,30,703	0/0:20,0:36:26.11:0,26,410	0/0:31,0:31:3.01:0,3,71	0/0:34,1:35:22.43:0,22,1505	0/0:16,0:26:47.34:0,47,754	0/0:14,0:13:3.01:0,3,48	0/0:16,0:32:27.06:0,27,365	0/0:20,0:35:43.35:0,43,710	0/0:7,0:19:14.88:0,15,246	1/1:19,19:38:45.15:702,45,0	1/1:15,15:30:36.59:560,37,0	0/0:19,0:24:12:0,12,182	1/1:12,14:27:32.12:495,32,0	0/0:32,0:32:24.07:0,24,522	0/0:22,0:22:30.10:0,30,706	0/0:58,1:57:46.49:0,46,1968	0/0:24,0:24:45.15:0,45,1014	0/0:12,0:12:18.05:0,18,378	0/0:26,0:26:48.16:0,48,1107	0/0:21,0:21:36.12:0,36,829	0/0:25,0:26:48.16:0,48,1077	0/0:20,0:20:42.14:0,42,986	0/0:11,0:11:15.05:0,15,353
chr10	85288135	.	TATCC	T	2184.46	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.327;DP=556;FS=0.000;HRun=0;HaplotypeScore=125.5488;InbreedingCoeff=0.9978;MQ=81.14;MQ0=0;MQRankSum=-7.650;QD=50.80;ReadPosRankSum=2.316;VQSLOD=4.3830;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,144,3182	0/0:8,0:8:24.08:0,24,564	0/0:19,0:18:27.11:0,27,1120	0/0:22,0:21:57.09:0,57,1326	0/0:15,0:15:39.12:0,39,1086	0/0:21,0:21:63.22:0,63,1669	0/0:25,0:25:72.25:0,72,1867	0/0:22,0:22:56.36:0,56,1388	0/0:28,0:28:84.29:0,84,2351	0/0:12,0:12:36.12:0,36,818	0/0:11,0:11:30.10:0,30,721	0/0:17,0:17:47.96:0,48,1126	0/0:15,0:15:39.13:0,39,830	0/0:21,0:21:60.21:0,60,1382	1/1:0,22:23:63.22:1309,63,0	1/1:0,20:20:48.16:997,48,0	0/0:27,0:27:69.22:0,69,1592	0/0:13,0:13:36.12:0,36,810	0/0:22,0:22:63.22:0,63,1704	0/0:17,0:17:48.16:0,48,1344	0/0:36,0:36:99:0,105,2859	0/0:15,0:15:39.13:0,39,1040	0/0:12,0:12:33.11:0,33,876	0/0:17,0:17:48.14:0,48,1232	0/0:17,0:17:51.16:0,51,1344	0/0:16,0:16:42.14:0,42,1174	0/0:19,0:19:57.18:0,57,1560	0/0:15,0:15:42.14:0,42,1047
chr10	85288140	.	TC	T	3039	PASS	AB=0.917;AC=19;AF=0.339;AN=56;BaseQRankSum=6.251;DP=534;FS=7.568;HRun=10;HaplotypeScore=89.9516;InbreedingCoeff=0.8856;MQ=79.90;MQ0=0;MQRankSum=-1.841;QD=16.52;ReadPosRankSum=4.885;VQSLOD=3.8122;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,32:44:92.95:803,93,0	1/1:1,7:8:20.95:175,21,0	0/0:17,0:16:6.80:0,7,217	0/0:21,0:20:26.30:0,26,323	0/0:13,0:13:33.07:0,33,349	0/0:20,0:20:45.12:0,45,498	0/0:26,0:26:51.09:0,51,537	0/0:18,1:19:7.36:0,7,266	0/0:28,0:28:81.13:0,81,855	1/1:0,10:10:29.98:256,30,0	1/1:2,7:9:20.99:182,21,0	1/1:2,15:17:41.99:364,42,0	1/1:1,15:16:35.99:312,36,0	1/1:3,17:20:31.20:397,31,0	0/0:23,0:23:40.86:0,41,338	0/0:22,0:22:53.07:0,53,396	1/1:2,25:27:59.99:521,60,0	1/1:1,10:11:26.99:234,27,0	0/1:20,2:22:7.01:7,0,377	0/0:17,0:17:42.10:0,42,456	0/0:38,0:38:84.18:0,84,906	0/0:14,0:14:27.06:0,27,290	0/0:12,0:12:27.02:0,27,270	0/0:14,1:16:6.87:0,7,287	0/0:17,0:17:45.08:0,45,471	0/0:16,1:18:10.04:0,10,338	0/0:18,0:18:48.13:0,48,531	0/0:11,0:11:27.06:0,27,289
chr10	85288322	.	TA	T	6955.26	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=11.667;DP=498;FS=0.774;HRun=9;HaplotypeScore=60.3877;InbreedingCoeff=0.9472;MQ=78.94;MQ0=0;MQRankSum=1.391;QD=20.95;ReadPosRankSum=1.253;VQSLOD=5.4544;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:24:63.30:526,63,0	1/1:1,4:5:11.95:100,12,0	0/1:13,0:6:1.47:1,0,73	0/0:21,0:19:23.17:0,23,208	0/0:26,0:26:69.17:0,69,776	0/0:21,0:21:60.17:0,60,685	1/1:3,11:14:33.01:301,33,0	1/1:6,33:40:99:873,101,0	0/0:18,0:18:54.12:0,54,594	1/1:3,20:23:60.02:545,60,0	1/1:3,18:21:47.92:421,48,0	1/1:3,11:15:32.98:291,33,0	1/1:1,11:13:27.01:247,27,0	1/1:0,12:12:36.02:328,36,0	1/1:1,13:14:33.02:301,33,0	1/1:1,13:14:36.02:328,36,0	1/1:3,21:24:57.02:521,57,0	0/0:22,0:23:63.04:0,63,698	1/1:0,9:9:26.99:238,27,0	1/1:3,24:27:71.77:614,72,0	1/1:0,9:9:21.01:192,21,0	0/0:19,0:19:54.13:0,54,595	0/0:17,0:17:42.06:0,42,450	0/0:8,0:8:21.06:0,21,243	0/0:13,0:13:36.09:0,36,398	1/1:1,16:17:44.88:389,45,0	1/1:1,23:24:45.02:411,45,0	1/1:0,14:14:36.02:328,36,0
chr10	85289631	.	CT	C	2318.57	PASS	AB=0.633;AC=26;AF=0.481;AN=54;BaseQRankSum=0.321;DP=384;FS=2.482;HRun=7;HaplotypeScore=47.6089;InbreedingCoeff=0.7583;MQ=41.93;MQ0=32;MQRankSum=-3.288;QD=11.71;ReadPosRankSum=2.348;VQSLOD=1.7506;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,17:24:4.32:357,4,0	1/1:5,3:8:9.02:91,9,0	0/0:2,0:1:2.37:0,2,8	./.	0/0:20,0:18:33.10:0,33,403	0/0:14,0:14:19.30:0,19,230	0/0:17,0:15:32.19:0,32,331	1/1:8,16:23:29.72:425,30,0	0/0:17,0:17:33.03:0,33,360	1/1:8,1:8:2.99:31,3,0	1/1:7,5:11:11.96:113,12,0	0/0:13,0:13:27.02:0,27,306	0/0:10,0:7:17.78:0,18,186	0/0:11,0:11:24:0,24,265	0/1:4,4:8:1.97:106,0,2	1/1:3,5:7:7.53:89,8,0	1/1:9,10:15:17.55:238,18,0	0/0:25,0:21:29.93:0,30,305	1/1:15,9:22:19.96:213,20,0	0/1:4,8:11:9.59:159,0,10	1/1:6,3:4:3:31,3,0	0/0:14,0:12:30.08:0,30,362	0/0:16,0:14:18.04:0,18,213	0/0:11,0:11:18.47:0,18,196	0/0:12,0:12:15.03:0,15,174	1/1:3,9:12:27.06:275,27,0	1/1:2,6:8:18.04:184,18,0	1/1:8,6:13:21.01:210,21,0
chr10	85289804	.	ATTCTATCTACAT	A	11347.34	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=14.994;DP=441;FS=0.849;HRun=0;HaplotypeScore=147.5817;InbreedingCoeff=0.9901;MQ=81.64;MQ0=0;MQRankSum=-12.643;QD=67.95;ReadPosRankSum=0.628;VQSLOD=4.6089;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:36.12:1230,36,0	1/1:0,7:7:14.97:463,15,0	0/0:20,0:20:51.14:0,51,1874	0/0:9,0:9:24.08:0,24,1314	0/0:20,0:20:57.18:0,57,3120	0/0:21,0:21:63.18:0,63,3411	0/0:17,0:17:45.15:0,45,2563	1/1:4,20:24:59.77:1309,60,0	0/0:20,0:20:57.16:0,57,2952	1/1:0,15:15:42.09:1472,42,0	1/1:1,12:13:30.10:1003,30,0	0/0:14,0:14:39.13:0,39,2235	0/0:12,0:12:36.12:0,36,2087	0/0:16,0:16:48.16:0,48,2580	0/0:25,0:25:69.24:0,69,4162	0/0:17,0:17:48.16:0,48,2756	1/1:0,18:18:24.08:894,24,0	0/0:24,0:24:69.22:0,69,3702	1/1:2,14:16:45.10:1323,45,0	1/1:0,9:9:24.08:894,24,0	1/1:1,12:13:18.06:618,18,0	0/0:13,0:13:39.13:0,39,2203	0/0:14,0:14:39.13:0,39,2299	0/0:18,0:18:51.16:0,51,2811	0/0:14,0:14:39.13:0,39,2375	1/1:0,6:6:18.01:578,18,0	1/1:1,12:13:30.10:1118,30,0	1/1:0,4:4:12.04:447,12,0
chr10	85290271	.	T	TC	7676.78	PASS	AB=0.928;AC=52;AF=0.929;AN=56;BaseQRankSum=0.027;DP=671;FS=4.956;HRun=1;HaplotypeScore=161.1781;InbreedingCoeff=0.4355;MQ=84.35;MQ0=0;MQRankSum=-4.322;QD=11.74;ReadPosRankSum=5.182;VQSLOD=3.6169;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:49,0:49:99:499,100,0	1/1:8,0:8:21.48:92,21,0	0/0:17,0:17:38.80:0,39,310	0/1:21,3:24:67.06:67,0,343	1/1:28,0:28:8:176,8,0	1/1:17,0:17:46.97:212,47,0	1/1:34,0:34:96.49:521,96,0	1/1:22,0:22:49.09:382,49,0	1/1:26,0:26:68.09:323,68,0	1/1:17,0:17:21.19:235,21,0	0/1:28,1:29:4.40:134,0,4	1/1:13,0:13:28.20:160,28,0	1/1:20,0:20:37.74:175,38,0	1/1:21,0:21:56.49:272,56,0	1/1:15,0:15:41.61:251,42,0	1/1:14,0:14:37.39:182,37,0	1/1:29,0:29:78.76:351,79,0	1/1:33,0:33:91.37:435,91,0	1/1:29,0:29:70.09:390,70,0	1/1:20,0:20:29.39:207,29,0	1/1:41,0:41:99:595,112,0	1/1:18,0:18:47.76:228,48,0	1/1:21,0:21:3.93:233,4,0	1/1:51,0:51:99:678,143,0	1/1:22,0:22:51.85:311,52,0	1/1:18,0:18:41.71:286,42,0	1/1:22,0:22:27.27:170,27,0	1/1:13,0:13:20.82:110,21,0
chr10	85292529	.	AT	A	1981.76	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.602;DP=510;FS=1.499;HRun=8;HaplotypeScore=46.3709;InbreedingCoeff=0.9909;MQ=75.21;MQ0=1;MQRankSum=-1.917;QD=21.54;ReadPosRankSum=2.780;VQSLOD=3.7047;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:45.07:434,45,0	1/1:0,6:6:15.02:145,15,0	0/0:10,0:10:27.05:0,27,294	0/0:11,0:10:29.92:0,30,329	0/0:18,0:18:54.14:0,54,627	0/0:30,0:30:84.25:0,84,1005	0/0:11,0:11:33.10:0,33,399	0/0:37,0:37:99:0,99,1186	0/0:15,0:15:39.12:0,39,471	1/1:1,24:25:72.07:681,72,0	1/1:0,15:15:41.89:374,42,0	0/0:17,0:17:48.13:0,48,559	0/0:7,0:7:21.06:0,21,251	0/0:19,0:19:48.14:0,48,569	0/0:13,0:13:36.10:0,36,425	0/0:17,0:17:45.13:0,45,532	1/1:3,22:25:54.08:521,54,0	0/0:32,0:32:90.19:0,90,1067	0/0:14,0:14:36.10:0,36,427	0/0:22,0:22:63.19:0,63,759	0/0:7,0:7:15.05:0,15,181	0/0:12,0:12:36.08:0,36,420	0/0:22,0:22:57.17:0,57,688	0/0:10,0:10:30.09:0,30,362	0/0:13,0:13:33.10:0,33,399	0/0:23,1:24:34.21:0,34,696	0/0:26,0:25:69.18:0,69,800	0/0:31,0:31:93.29:0,93,1123
chr10	85293082	.	C	CACAT	1284.18	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=9.089;DP=475;FS=8.111;HRun=0;HaplotypeScore=117.3694;InbreedingCoeff=0.5270;MQ=56.00;MQ0=6;MQRankSum=-1.462;QD=10.61;ReadPosRankSum=-0.934;VQSLOD=2.0409;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.22:0,81,1572	0/0:4,0:3:2.97:0,3,20	0/0:26,0:9:20.29:0,20,241	0/0:19,0:7:17.91:0,18,214	0/0:21,0:21:63.22:0,63,1252	0/0:20,0:20:57.18:0,57,1149	1/1:18,1:19:30.10:347,30,0	0/0:26,0:25:54:0,54,964	0/0:16,0:16:45.11:0,45,883	0/0:26,0:26:70.67:0,71,1141	0/1:15,0:14:15.59:16,0,114	1/1:11,1:12:14.74:197,15,0	1/1:13,4:17:39.75:386,40,0	1/1:10,8:18:32.47:370,32,0	0/1:15,0:14:25.27:25,0,164	0/1:13,0:13:5.36:5,0,73	0/0:13,0:13:20.79:0,21,228	0/1:12,0:12:43.94:109,0,44	0/0:13,0:13:35.47:0,35,640	0/0:16,0:16:22.93:0,23,461	0/0:13,0:13:5.45:0,5,118	0/0:21,0:21:63.20:0,63,1246	0/0:12,0:12:33.07:0,33,645	0/0:26,0:25:72.19:0,72,1442	0/0:25,0:25:75.20:0,75,1432	0/0:13,0:11:32.28:0,32,504	0/0:8,0:7:5.57:0,6,287	0/0:7,0:7:18.05:0,18,331
chr10	85293083	.	G	GCACACACACA	3846.30	PASS	AB=0.960;AC=15;AF=0.268;AN=56;BaseQRankSum=11.319;DP=516;FS=20.249;HRun=0;HaplotypeScore=183.7752;InbreedingCoeff=-0.2671;MQ=54.31;MQ0=6;MQRankSum=-8.325;QD=15.83;ReadPosRankSum=-5.461;VQSLOD=-0.2631;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:72.08:0,72,1814	1/1:5,0:4:0.47:1,0,0	0/0:26,0:8:5.42:0,5,84	0/0:20,0:8:10.52:0,11,186	0/0:21,0:21:63.20:0,63,1527	0/0:19,0:19:54.61:0,55,1434	0/1:25,1:26:98.76:302,0,99	0/1:26,0:25:98.57:99,0,404	0/0:16,0:16:45.10:0,45,1153	0/1:33,0:33:99:680,0,633	0/1:15,0:14:33.35:33,0,82	0/1:17,1:18:11.75:438,0,12	0/1:18,4:22:99:869,0,128	0/1:13,7:21:38.82:699,0,39	0/0:15,0:14:32.34:0,32,251	0/0:13,0:13:32.65:0,33,228	0/1:16,0:16:52.05:52,0,73	0/0:13,0:13:7.63:0,8,600	0/1:13,0:13:99:194,0,284	0/1:16,0:16:29.44:29,0,156	0/0:17,0:17:5.22:0,5,58	0/0:21,0:21:60.15:0,60,1559	0/0:12,0:12:33.09:0,33,860	0/0:26,0:25:69.22:0,69,1986	0/0:24,0:24:60.16:0,60,1470	0/1:17,0:15:99:365,0,206	0/1:8,0:7:83.37:83,0,176	0/1:7,0:7:2.03:2,0,161
chr10	85293087	.	G	GCACA	3973.34	PASS	AB=0.821;AC=34;AF=0.607;AN=56;BaseQRankSum=5.565;DP=550;FS=20.703;HRun=0;HaplotypeScore=143.1907;InbreedingCoeff=0.7676;MQ=53.67;MQ0=6;MQRankSum=-6.662;QD=11.32;ReadPosRankSum=-4.937;VQSLOD=0.0212;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:31:34.14:0,34,730	1/1:5,0:4:2.99:25,3,0	0/1:29,0:11:0.92:1,0,15	0/0:21,0:8:8.39:0,8,104	0/0:22,0:24:54.09:0,54,747	0/0:18,0:19:36.11:0,36,573	1/1:25,0:25:19.85:280,20,0	1/1:23,0:22:23.92:236,24,0	0/0:12,0:15:36.06:0,36,494	1/1:32,0:32:34.34:337,34,0	1/1:14,2:19:2.78:24,3,0	1/1:20,0:20:29.39:306,29,0	1/1:22,0:22:36.07:496,36,0	1/1:22,0:22:30.04:362,30,0	1/1:6,11:17:24.08:588,24,0	1/1:3,11:15:10.09:592,10,0	1/1:15,0:15:5.92:41,6,0	0/0:11,0:11:20.96:0,21,319	1/1:10,6:18:26.63:323,27,0	0/1:11,10:24:4:17,0,4	1/1:19,0:19:8.89:62,9,0	0/0:20,0:20:42.14:0,42,688	0/0:11,0:12:30.04:0,30,418	0/0:24,0:24:57.19:0,57,931	0/0:21,0:21:39.08:0,39,588	1/1:17,0:15:20.25:208,20,0	1/1:7,8:18:2.75:51,3,0	1/1:7,0:7:2.99:24,3,0
chr10	85293572	.	C	CG	14147.95	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-14.150;DP=515;FS=17.805;HRun=0;HaplotypeScore=44.6978;InbreedingCoeff=0.9986;MQ=89.47;MQ0=0;MQRankSum=-2.968;QD=43.40;ReadPosRankSum=1.812;VQSLOD=2.9591;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:99:1581,99,0	1/1:0,8:8:21.07:336,21,0	0/0:18,0:18:51.12:0,51,689	0/0:20,0:21:53.96:0,54,690	0/0:28,0:28:84.28:0,84,1175	0/0:25,0:25:75.24:0,75,1032	1/1:0,19:19:42.14:671,42,0	1/1:0,40:40:99:1904,120,0	0/0:17,0:17:48.16:0,48,670	1/1:3,14:17:42.09:621,42,0	1/1:0,15:15:42.14:671,42,0	1/1:0,13:13:36.12:575,36,0	1/1:0,13:13:39.13:623,39,0	1/1:0,16:16:45.15:719,45,0	0/0:17,0:17:51.17:0,51,713	0/0:13,0:13:36.12:0,36,504	1/1:0,16:16:42.14:671,42,0	1/1:0,26:26:60.20:958,60,0	1/1:1,8:9:27.07:407,27,0	1/1:0,18:18:51.17:815,51,0	1/1:0,23:23:66.23:1054,66,0	0/0:16,0:16:48.15:0,48,654	0/0:16,0:16:35.63:0,36,501	0/0:11,0:11:33.11:0,33,461	0/0:7,0:7:21.07:0,21,294	1/1:0,19:19:57.16:864,57,0	1/1:0,19:19:54.18:863,54,0	1/1:0,17:17:51.17:814,51,0
chr10	85294281	.	C	CG	325.27	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.226;DP=655;FS=1.831;HRun=0;HaplotypeScore=120.0380;InbreedingCoeff=0.9010;MQ=65.68;MQ0=9;MQRankSum=-3.997;QD=4.17;ReadPosRankSum=3.090;VQSLOD=3.6179;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:71.99:0,72,851	0/0:12,0:12:27.56:0,28,370	0/0:19,0:14:39.08:0,39,516	0/0:28,0:19:47.72:0,48,609	0/0:17,0:17:30.09:0,30,399	0/0:23,0:23:53.49:0,53,647	1/1:1,6:24:3.30:31,3,0	0/0:38,0:36:91.38:0,91,1131	0/0:12,0:12:24.03:0,24,309	0/0:33,0:32:88.82:0,89,1118	0/0:21,0:19:33.10:0,33,429	1/1:11,9:20:40.10:161,40,0	1/1:7,3:10:3.78:38,4,0	1/1:15,8:23:50.39:238,50,0	0/0:24,0:24:29.97:0,30,392	0/0:15,0:15:20.18:0,20,305	0/0:24,0:24:24.03:0,24,276	0/0:21,0:20:51.55:0,52,561	0/0:22,0:22:58.02:0,58,731	0/0:17,0:17:40.53:0,41,560	0/0:32,0:32:63.13:0,63,798	0/0:22,0:22:33.72:0,34,533	0/0:24,0:24:42.06:0,42,540	0/0:39,0:39:99:0,104,1325	0/0:24,0:23:51.17:0,51,700	0/0:22,0:22:62.21:0,62,688	0/0:24,0:24:54.61:0,55,681	0/0:19,0:18:51.17:0,51,692
chr10	85294282	.	TCTCTCTCTCTCTC	T	1969.71	PASS	AB=0.808;AC=6;AF=0.107;AN=56;BaseQRankSum=9.067;DP=667;FS=3.518;HRun=0;HaplotypeScore=225.1509;InbreedingCoeff=0.7156;MQ=65.42;MQ0=9;MQRankSum=-5.309;QD=26.26;ReadPosRankSum=3.525;VQSLOD=2.8909;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:72.20:0,72,2686	0/0:12,0:12:27.56:0,28,786	0/0:19,0:14:39.07:0,39,474	0/0:28,0:19:45.05:0,45,536	0/0:17,0:17:30.10:0,30,1046	0/0:26,0:26:63.68:0,64,1823	0/1:18,3:21:0.90:342,0,1	0/0:37,0:35:99:0,102,2702	0/0:17,0:17:38.77:0,39,1240	0/0:35,0:34:98.35:0,98,4026	0/0:22,0:20:36.12:0,36,1072	1/1:11,8:20:12.54:784,13,0	0/1:7,3:10:24.85:246,0,25	1/1:15,7:23:29.07:732,29,0	0/0:24,0:24:33.07:0,33,921	0/0:15,0:15:24.08:0,24,846	0/0:23,0:23:24.08:0,24,877	0/0:21,0:20:57.19:0,57,2385	0/0:22,0:22:66.18:0,66,1538	0/0:17,0:17:41.95:0,42,842	0/0:34,0:34:72.24:0,72,2826	0/0:24,0:24:50.86:0,51,1879	0/0:25,0:25:44.94:0,45,2098	0/0:39,0:39:99:0,105,4548	0/0:25,0:24:57.17:0,57,1921	0/0:22,0:22:64.77:0,65,3193	0/0:24,0:24:57.19:0,57,2623	0/0:19,0:18:54.18:0,54,1397
chr10	85294659	.	GGAGTGT	G	2271.41	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=2.723;DP=520;FS=19.056;HRun=0;HaplotypeScore=127.9866;InbreedingCoeff=0.9783;MQ=66.07;MQ0=13;MQRankSum=-2.299;QD=32.45;ReadPosRankSum=0.144;VQSLOD=1.9266;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:29.84:0,30,399	0/0:6,0:6:11.95:0,12,172	0/0:23,0:12:19.30:0,19,289	0/0:31,0:23:25.01:0,25,766	0/0:21,0:21:57.10:0,57,1406	0/0:21,0:21:57.14:0,57,1516	1/1:7,11:22:39.04:655,39,0	0/0:19,0:18:51.09:0,51,853	0/0:18,0:17:47.95:0,48,1008	0/0:14,0:14:30.08:0,30,660	0/0:8,0:8:11.54:0,12,100	1/1:7,5:13:32.98:461,33,0	1/1:11,6:17:47.95:674,48,0	1/1:10,6:18:45.03:642,45,0	0/0:18,0:18:35.98:0,36,363	0/0:13,0:13:29.98:0,30,478	0/0:19,0:20:41.75:0,42,547	0/0:16,0:16:38.82:0,39,954	0/0:17,0:17:47.93:0,48,676	0/0:14,0:13:30.02:0,30,613	0/0:33,0:31:48:0,48,737	0/0:25,0:24:59.41:0,59,1107	0/0:26,0:26:69.04:0,69,1303	0/0:30,0:30:87.04:0,87,2086	0/0:13,0:13:38.88:0,39,987	0/0:17,0:17:47.13:0,47,679	0/0:18,0:17:30.47:0,30,579	0/0:10,0:10:23.77:0,24,446
chr10	85294661	.	A	AGTGT	2221.99	PASS	AB=0.864;AC=26;AF=0.481;AN=54;BaseQRankSum=-1.007;DP=593;FS=5.087;HRun=0;HaplotypeScore=144.6152;InbreedingCoeff=0.5388;MQ=65.18;MQ0=15;MQRankSum=-0.544;QD=6.55;ReadPosRankSum=-1.917;VQSLOD=2.1968;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,1:25:2.81:52,3,0	0/1:7,0:8:0:0,0,0	1/1:25,0:14:6.01:73,6,0	0/1:34,0:25:16.96:17,0,41	0/0:24,0:24:29.97:0,30,417	0/0:20,0:23:8.17:0,8,359	0/0:22,0:22:20.59:0,21,195	1/1:18,0:19:11.51:137,12,0	0/0:19,0:18:18.06:0,18,283	1/1:18,0:18:21.04:305,21,0	0/1:15,0:15:0:1,0,0	0/0:13,0:13:12.01:0,12,112	0/0:17,0:17:18.02:0,18,167	0/0:18,0:18:18.02:0,18,167	./.	1/1:17,0:22:8.74:149,9,0	0/1:26,0:26:9.96:132,0,10	0/1:8,0:17:25.32:65,0,25	1/1:15,2:18:8.77:155,9,0	1/1:7,5:15:9.03:214,9,0	0/1:23,12:37:15:154,0,15	0/0:19,0:23:17.94:0,18,245	0/0:25,0:27:3.10:0,3,315	0/0:29,0:30:51.17:0,51,779	0/0:13,0:15:24.07:0,24,359	1/1:10,6:16:18.06:348,18,0	1/1:11,9:20:15.51:323,16,0	1/1:4,6:15:12.04:285,12,0
chr10	85294733	.	CT	C	1832.84	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.713;DP=615;FS=18.103;HRun=1;HaplotypeScore=93.3393;InbreedingCoeff=0.9795;MQ=75.33;MQ0=3;MQRankSum=0.253;QD=27.77;ReadPosRankSum=-3.038;VQSLOD=1.6908;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:91.71:0,92,1234	0/0:3,0:3:9.03:0,9,131	0/0:40,0:24:15.58:0,16,492	0/0:46,0:31:30.43:0,30,617	0/0:24,0:24:69.21:0,69,1006	0/0:20,0:20:57.18:0,57,815	1/1:1,23:25:54.47:658,54,0	0/0:29,0:29:78.18:0,78,1096	0/0:25,0:25:75.23:0,75,1047	0/0:13,0:13:27.02:0,27,336	0/0:19,0:19:48.13:0,48,683	1/1:0,13:13:36.12:459,36,0	1/1:3,9:12:29.68:338,30,0	1/1:3,13:16:45.53:539,46,0	0/0:17,0:17:48.16:0,48,701	0/0:20,0:20:48.15:0,48,678	0/0:30,0:30:75.13:0,75,997	0/0:19,0:19:51.15:0,51,726	0/0:16,0:16:48.10:0,48,588	0/0:23,0:23:66.18:0,66,906	0/0:21,0:21:48.13:0,48,679	0/0:23,0:23:62.91:0,63,862	0/0:21,0:21:63.15:0,63,813	0/0:33,0:33:96.24:0,96,1297	0/0:16,0:16:45.14:0,45,640	0/0:20,0:20:60.18:0,60,826	0/0:16,0:16:36.07:0,36,467	0/0:20,0:20:48.15:0,48,679
chr10	85296558	.	AAC	A	145.93	PASS	AB=1.000;AC=9;AF=0.346;AN=26;BaseQRankSum=-1.955;DP=161;FS=10.770;HRun=0;HaplotypeScore=43.9500;InbreedingCoeff=0.4277;MQ=81.74;MQ0=30;MQRankSum=-0.157;QD=9.73;ReadPosRankSum=3.304;VQSLOD=1.4467;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:52,0:11:14.36:0,14,103	0/0:71,0:15:2.23:0,2,160	0/0:5,0:4:0.47:0,0,2	0/0:2,0:1:0.47:0,0,1	./.	./.	./.	1/1:1,1:2:6.01:65,6,0	0/1:1,0:1:0:0,0,0	./.	./.	./.	./.	./.	0/0:3,0:2:0.47:0,0,1	./.	./.	0/0:4,1:2:0:0,0,0	./.	1/1:6,0:5:2.89:47,3,0	0/0:2,0:2:1.82:0,2,6	./.	1/1:1,2:3:6.02:69,6,0	./.	1/1:1,1:2:5.99:53,6,0	0/0:0,1:1:0.47:0,0,1
chr10	85296825	.	C	CAG	474.59	PASS	AB=0.963;AC=21;AF=0.700;AN=30;BaseQRankSum=-1.249;DP=231;FS=0.000;HRun=0;HaplotypeScore=32.6997;InbreedingCoeff=0.1544;MQ=20.82;MQ0=60;MQRankSum=1.656;QD=3.80;ReadPosRankSum=0.076;VQSLOD=1.3614;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	0/1:13,0:9:3.33:155,0,3	1/1:5,1:2:3.01:36,3,0	1/1:10,0:6:4.73:52,5,0	./.	./.	1/1:9,1:6:3.01:32,3,0	1/1:5,0:3:2.94:18,3,0	0/1:9,0:6:0:0,0,0	1/1:14,1:14:3.37:36,3,0	./.	0/1:5,0:2:0.01:0,0,0	1/1:3,2:3:5.61:104,6,0	0/0:9,2:6:0:0,0,0	./.	1/1:12,0:7:3.01:43,3,0	./.	0/1:12,2:7:0:0,0,0	./.	0/1:14,1:11:9.90:10,0,15	0/0:11,0:5:3:0,3,26	1/1:5,1:2:6.02:75,6,0
chr10	85296837	.	G	GAC	491.84	PASS	AB=0.935;AC=9;AF=0.265;AN=34;BaseQRankSum=-2.437;DP=339;FS=7.537;HRun=0;HaplotypeScore=54.2628;InbreedingCoeff=-0.1047;MQ=24.66;MQ0=63;MQRankSum=-3.137;QD=3.78;ReadPosRankSum=-0.294;VQSLOD=0.5015;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	0/0:14,0:8:0:0,0,1	0/1:24,1:16:0.77:1,0,348	0/0:6,3:5:8.94:0,9,106	0/1:17,1:12:69.59:127,0,70	./.	./.	0/0:11,0:6:12.01:0,12,146	0/0:5,0:3:3.01:0,3,34	0/1:14,0:11:0:0,0,0	0/1:17,1:16:39.20:74,0,39	0/0:6,0:2:3.01:0,3,45	0/0:9,0:5:9.03:0,9,125	0/1:10,1:10:66.18:66,0,110	0/0:15,1:11:6.45:0,6,66	./.	1/1:12,5:13:2.80:13,3,0	./.	0/0:18,0:11:12.02:0,12,152	./.	0/1:14,6:15:99:301,0,175	0/0:17,4:12:1.79:0,2,196	0/1:7,0:3:10.15:10,0,34
chr10	85296845	.	GAGAC	G	32.65	PASS	AB=0.989;AC=9;AF=0.225;AN=40;BaseQRankSum=0.356;DP=388;FS=3.455;HRun=0;HaplotypeScore=81.5297;InbreedingCoeff=0.1288;MQ=25.25;MQ0=59;MQRankSum=-1.167;QD=0.29;ReadPosRankSum=0.464;VQSLOD=1.3611;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	0/1:13,0:8:0:0,0,0	0/1:15,0:9:0:0,0,0	0/0:31,0:21:39.31:0,39,332	0/0:10,0:7:8.99:0,9,166	0/1:19,0:13:43.28:43,0,203	./.	0/0:10,0:6:2.13:0,2,5	0/0:11,0:7:14.49:0,14,146	0/0:5,0:4:3.01:0,3,58	1/1:12,3:13:0.47:1,0,0	0/1:17,1:16:17.90:45,0,18	0/0:7,0:2:3.01:0,3,80	0/1:9,0:5:33.19:33,0,44	0/0:13,0:11:8.09:0,8,178	0/0:19,0:14:10.05:0,10,170	./.	1/1:22,0:17:0.88:2,1,0	0/0:23,0:15:2.83:0,3,22	0/0:18,0:13:12.03:0,12,240	./.	0/0:26,0:19:42.16:0,42,520	0/0:22,0:13:17.89:0,18,285	0/0:10,0:6:3.80:0,4,104
chr10	85296851	.	GAGAC	G	194.06	PASS	AB=0.941;AC=11;AF=0.262;AN=42;BaseQRankSum=-2.117;DP=422;FS=5.389;HRun=0;HaplotypeScore=88.5706;InbreedingCoeff=0.1161;MQ=25.95;MQ0=57;MQRankSum=-0.969;QD=1.34;ReadPosRankSum=-1.532;VQSLOD=1.2568;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	0/1:14,0:9:0:0,0,0	0/1:9,5:9:0:0,0,0	0/0:35,0:25:36.37:0,36,290	0/0:10,0:8:8.58:0,9,45	0/1:19,1:14:76.13:76,0,182	./.	0/0:7,2:6:2.13:0,2,5	0/0:10,1:7:14.18:0,14,108	0/0:4,1:4:3.01:0,3,42	1/1:15,0:13:2.29:5,2,0	0/1:18,0:16:24.34:90,0,24	0/0:7,0:2:3.01:0,3,74	0/1:8,1:6:18.67:51,0,19	0/1:16,0:12:58.30:58,0,101	0/0:22,0:17:10.05:0,10,113	0/1:14,0:6:0:0,0,0	1/1:24,1:20:2.96:20,3,0	0/0:24,1:17:2.63:0,3,14	0/0:24,0:19:11.49:0,11,60	./.	0/0:29,0:22:44.95:0,45,437	0/0:25,0:16:6.50:0,7,115	0/0:10,0:6:2.97:0,3,25
chr10	85296853	.	GAC	G	1227.43	PASS	AB=0.890;AC=23;AF=0.548;AN=42;BaseQRankSum=-3.391;DP=421;FS=1.096;HRun=0;HaplotypeScore=79.9872;InbreedingCoeff=-0.0672;MQ=26.05;MQ0=54;MQRankSum=3.288;QD=3.77;ReadPosRankSum=-1.475;VQSLOD=2.2258;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	0/1:14,0:9:0:0,0,0	0/1:13,1:9:0.01:0,0,0	0/1:34,2:26:99:298,0,143	1/1:11,0:8:8.91:63,9,0	0/1:18,2:14:72.76:73,0,145	./.	0/0:9,0:6:2.13:0,2,5	0/0:11,0:7:5.68:0,6,38	0/0:5,0:4:2.37:0,2,8	1/1:10,5:13:1.72:4,2,0	0/1:10,8:16:14.46:92,0,14	0/0:7,0:2:3.01:0,3,54	0/1:3,6:6:2.39:139,0,2	0/1:14,2:12:81.59:149,0,82	0/1:21,1:17:44.40:60,0,44	0/1:13,0:6:0:0,0,0	1/1:25,1:21:2.84:14,3,0	1/1:24,1:17:3:29,3,0	1/1:23,0:19:11.82:76,12,0	./.	0/1:28,1:22:99:170,0,262	0/1:22,3:16:15.40:120,0,15	1/1:10,0:6:8.86:61,9,0
chr10	85296855	.	CAG	C	1604.57	PASS	AB=0.804;AC=20;AF=0.476;AN=42;BaseQRankSum=-4.444;DP=443;FS=4.065;HRun=0;HaplotypeScore=85.0180;InbreedingCoeff=-0.0526;MQ=26.39;MQ0=52;MQRankSum=3.158;QD=5.38;ReadPosRankSum=-0.282;VQSLOD=2.7888;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	0/1:7,7:9:0:0,0,0	0/0:18,0:12:0:0,0,1	0/1:29,12:31:99:421,0,401	1/1:5,6:8:9.03:129,9,0	0/1:21,0:15:6.31:6,0,227	./.	0/0:10,0:7:5.42:0,5,23	0/0:11,0:7:14.83:0,15,126	0/0:5,0:4:3:0,3,26	1/1:15,0:13:0.47:1,0,0	0/1:17,0:16:26.24:69,0,26	0/0:8,0:3:3.01:0,3,39	0/1:9,0:6:21.07:70,0,21	0/1:10,5:12:99:137,0,157	0/1:19,6:20:42.01:117,0,42	0/1:3,9:6:0:0,0,0	0/0:20,7:22:0:0,0,0	1/1:18,9:19:3.01:43,3,0	1/1:7,17:20:12.04:172,12,0	./.	0/1:22,9:24:99:253,0,470	0/1:14,11:16:37.49:207,0,37	1/1:4,6:6:7.68:102,8,0
chr10	85296861	.	CAG	C	72.58	PASS	AB=0.934;AC=14;AF=0.333;AN=42;BaseQRankSum=2.303;DP=488;FS=0.000;HRun=0;HaplotypeScore=107.2402;InbreedingCoeff=0.1851;MQ=27.86;MQ0=51;MQRankSum=-0.554;QD=0.39;ReadPosRankSum=2.560;VQSLOD=1.8327;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	0/0:14,0:10:2.95:0,3,23	1/1:15,3:12:0.17:0,0,0	0/1:40,2:36:37.16:37,0,743	0/0:14,0:11:2.28:0,2,38	0/1:18,4:19:85.64:86,0,136	./.	0/0:11,0:8:0.22:0,0,20	1/1:12,0:8:2.68:13,3,0	1/1:5,0:4:2.04:6,2,0	1/1:14,1:14:1.57:3,2,0	0/1:18,2:20:26.93:27,0,74	0/0:9,0:4:2.92:0,3,17	0/0:13,0:10:23.16:0,23,179	0/0:16,0:11:4.04:0,4,183	0/0:29,0:24:9.09:0,9,147	0/1:13,0:7:0:0,0,0	0/0:28,0:23:0:0,0,0	1/1:28,0:21:1.82:5,2,0	0/0:24,0:20:11.15:0,11,57	./.	0/0:34,0:28:26.18:0,26,655	0/0:25,0:18:10.52:0,11,138	0/0:8,0:6:6.76:0,7,84
chr10	85296871	.	CAG	C	424.44	PASS	AB=0.964;AC=12;AF=0.273;AN=44;BaseQRankSum=2.175;DP=522;FS=1.037;HRun=0;HaplotypeScore=115.6548;InbreedingCoeff=0.5072;MQ=29.63;MQ0=49;MQRankSum=-1.654;QD=3.82;ReadPosRankSum=0.499;VQSLOD=2.7692;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	0/0:17,0:12:5.98:0,6,66	1/1:17,3:12:0.17:0,0,0	0/0:48,0:37:69.63:0,70,949	0/0:15,0:12:14.98:0,15,153	0/1:24,2:22:99:141,0,184	./.	1/1:4,5:7:3.61:88,4,0	1/1:6,6:8:15.01:155,15,0	1/1:4,1:4:3.01:40,3,0	1/1:14,2:15:6.49:73,6,0	0/1:23,0:21:5.29:61,0,5	0/0:7,3:5:3.01:0,3,40	0/0:14,0:11:27.06:0,27,301	0/0:14,0:9:22.95:0,23,304	0/0:34,0:30:39.08:0,39,429	0/0:17,0:11:11.89:0,12,108	0/0:35,1:31:11.97:0,12,118	0/0:27,2:21:5.79:0,6,65	0/0:25,1:22:18.04:0,18,199	0/0:17,0:16:3.01:0,3,35	0/0:35,0:30:55.95:0,56,766	0/0:26,0:19:23.64:0,24,329	0/0:10,0:6:17.98:0,18,192
chr10	85296873	.	G	GAC	225	PASS	AB=0.899;AC=5;AF=0.109;AN=46;BaseQRankSum=-0.593;DP=532;FS=34.162;HRun=0;HaplotypeScore=119.9972;InbreedingCoeff=0.1485;MQ=30.14;MQ0=48;MQRankSum=-0.606;QD=2.53;ReadPosRankSum=1.011;VQSLOD=0.5053;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/0:31,0:28:2.99:0,3,24	0/0:17,0:12:5.57:0,6,32	0/0:21,0:13:0.47:0,0,1	0/0:46,0:35:82.55:0,83,1065	0/0:17,0:14:18.01:0,18,204	0/0:27,0:23:2.37:0,2,257	./.	0/0:9,0:7:11.77:0,12,107	0/1:12,0:8:19.06:19,0,48	0/0:5,0:4:2.80:0,3,13	1/1:11,5:15:6.02:96,6,0	0/1:13,10:21:99:208,0,107	0/0:9,0:5:3.01:0,3,46	0/0:14,0:11:14.34:0,14,237	0/0:16,0:11:12.68:0,13,259	0/1:38,0:33:2.08:2,0,241	0/0:17,0:11:11.95:0,12,93	0/0:37,0:31:11.55:0,12,96	0/0:31,0:23:8.80:0,9,58	0/0:26,0:22:17.54:0,18,219	0/0:17,0:16:3.01:0,3,38	0/0:35,0:30:22.50:0,23,674	0/0:27,0:19:30.28:0,30,300	0/0:10,0:6:17.63:0,18,155
chr10	85296889	.	C	CAG	261.06	PASS	AB=0.987;AC=7;AF=0.146;AN=48;BaseQRankSum=2.967;DP=525;FS=26.937;HRun=0;HaplotypeScore=127.3272;InbreedingCoeff=0.0539;MQ=33.51;MQ0=34;MQRankSum=-5.459;QD=1.76;ReadPosRankSum=0.351;VQSLOD=0.7518;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/0:31,2:31:12.02:0,12,144	0/0:19,0:14:5.49:0,5,79	0/1:22,0:15:0:0,0,0	0/1:36,0:28:99:215,0,294	0/0:21,0:18:33.09:0,33,418	0/0:31,0:27:14.93:0,15,417	0/0:11,0:10:3:0,3,27	0/0:9,0:8:2.03:0,2,5	1/1:11,0:8:0.47:39,0,0	0/0:5,0:5:2.94:0,3,18	0/0:16,0:15:12.02:0,12,143	0/0:23,0:22:23.52:0,24,221	0/0:9,0:6:6.01:0,6,68	0/0:15,0:13:35.08:0,35,420	0/1:19,0:16:16.71:17,0,368	0/0:33,1:30:51.08:0,51,646	0/0:16,0:12:18.06:0,18,240	0/0:34,1:31:15.05:0,15,200	0/0:26,3:23:18.47:0,18,205	0/0:24,1:23:18.06:0,18,240	0/0:19,0:19:14.99:0,15,171	0/1:33,1:31:45:45,0,635	0/1:25,1:18:55.39:55,0,359	0/0:8,0:7:1.41:0,1,214
chr10	85296893	.	GAGAC	G	898.40	PASS	AB=0.927;AC=11;AF=0.220;AN=50;BaseQRankSum=1.598;DP=543;FS=22.653;HRun=0;HaplotypeScore=132.1437;InbreedingCoeff=0.2501;MQ=34.35;MQ0=31;MQRankSum=-6.131;QD=5.44;ReadPosRankSum=-0.587;VQSLOD=0.4890;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:5,0:2:3.48:0,3,50	0/0:30,2:30:21.03:0,21,414	0/0:17,2:14:5.96:0,6,160	0/0:17,6:16:2.04:0,2,6	0/1:36,5:32:99:375,0,777	0/0:19,1:17:33.07:0,33,790	0/1:27,2:25:61.67:62,0,633	0/1:12,0:11:10.97:11,0,31	1/1:6,5:10:6.84:142,7,0	1/1:7,4:8:18.05:253,18,0	1/1:4,1:5:2.74:12,3,0	0/0:17,0:16:14.82:0,15,313	0/0:22,1:23:7.82:0,8,441	0/0:9,0:6:6.02:0,6,118	0/0:15,0:13:35.33:0,35,837	0/1:19,1:18:37.19:37,0,635	0/0:32,2:31:53.92:0,54,1294	0/0:16,0:12:20.87:0,21,505	0/0:33,3:33:17.97:0,18,407	0/0:27,2:24:20.28:0,20,491	0/0:26,0:24:20.93:0,21,519	0/0:17,2:19:21.05:0,21,399	0/1:28,6:31:99:149,0,1274	0/0:23,4:19:38.02:0,38,841	0/0:8,0:7:9.10:0,9,386
chr10	85296895	.	GAC	G	71.42	PASS	AB=0.979;AC=10;AF=0.192;AN=52;BaseQRankSum=3.278;DP=534;FS=7.366;HRun=0;HaplotypeScore=125.7580;InbreedingCoeff=0.2938;MQ=37.97;MQ0=28;MQRankSum=-3.606;QD=0.71;ReadPosRankSum=-1.193;VQSLOD=1.7588;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:7,0:7:2.97:20,3,0	./.	0/0:9,0:5:5.52:0,6,53	0/0:31,0:29:21:0,21,346	0/1:18,0:14:15.94:16,0,106	0/0:19,5:17:2.04:0,2,6	0/1:40,0:30:23.66:24,0,767	0/0:20,0:17:33.07:0,33,626	0/0:27,1:25:5.63:0,6,392	0/1:11,0:10:11.01:11,0,16	0/1:10,1:10:15.85:21,0,16	1/1:10,1:8:14.05:94,14,0	1/1:3,0:3:2.99:23,3,0	0/0:16,0:15:14.81:0,15,252	0/0:22,0:22:23.63:0,24,372	0/0:9,0:6:5.99:0,6,79	0/0:15,0:13:34.36:0,34,635	0/0:21,0:19:32.35:0,32,592	0/0:34,0:31:53.63:0,54,943	0/0:17,0:13:20.97:0,21,368	0/0:36,0:33:18.04:0,18,313	0/0:28,0:24:20.71:0,21,397	0/0:26,0:24:20.85:0,21,364	0/0:16,0:16:21.05:0,21,346	0/0:33,0:30:5.07:0,5,997	0/0:26,0:19:37.98:0,38,627	0/0:8,0:7:3.26:0,3,305
chr10	85296897	.	C	CAGAG	594.27	PASS	AB=0.947;AC=11;AF=0.212;AN=52;BaseQRankSum=3.736;DP=532;FS=11.450;HRun=0;HaplotypeScore=136.2821;InbreedingCoeff=0.3473;MQ=38.82;MQ0=28;MQRankSum=-4.184;QD=3.88;ReadPosRankSum=-1.186;VQSLOD=1.7196;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:7,0:7:2.96:20,3,0	./.	0/0:11,0:7:4.78:0,5,72	0/0:30,0:29:21:0,21,352	0/0:20,0:16:5.91:0,6,110	0/1:16,9:18:0:0,0,0	0/1:39,0:29:90.60:91,0,698	0/0:18,0:17:32.92:0,33,564	0/1:27,0:24:36.89:37,0,359	0/1:10,0:9:10.97:11,0,29	1/1:9,2:10:12.04:310,12,0	1/1:10,0:7:17.44:253,17,0	0/0:3,0:3:1.82:0,2,5	0/0:17,0:16:18.05:0,18,271	0/0:21,0:21:1.94:0,2,260	0/0:9,0:7:6.02:0,6,92	0/0:15,0:13:32.95:0,33,604	0/1:24,0:22:14.63:15,0,459	0/0:32,0:29:50.97:0,51,917	0/0:17,0:13:20.96:0,21,375	0/0:35,0:33:18.04:0,18,300	0/0:28,0:25:24.45:0,24,427	0/0:27,0:25:20.92:0,21,367	0/0:16,0:16:21.07:0,21,356	0/0:31,0:28:21.86:0,22,877	0/0:26,0:19:32.20:0,32,583	0/0:8,0:7:12.52:0,13,265
chr10	85296972	.	A	AAGGG	2874	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-1.113;DP=509;FS=0.000;HRun=0;HaplotypeScore=102.1931;InbreedingCoeff=0.9178;MQ=78.61;MQ0=0;MQRankSum=-1.532;QD=26.61;ReadPosRankSum=-0.915;VQSLOD=2.8282;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,20:28:33.11:823,33,0	1/1:2,4:6:8.98:168,9,0	0/0:30,0:27:20.22:0,20,292	0/0:33,0:34:8.02:0,8,429	0/0:22,0:22:48.15:0,48,753	0/0:11,0:10:21.07:0,21,330	1/1:4,16:19:24.08:555,24,0	0/0:31,0:31:39.08:0,39,539	0/0:17,0:15:36.10:0,36,576	1/1:5,3:8:6.02:126,6,0	1/1:1,5:7:9.03:223,9,0	1/1:3,12:14:24.08:597,24,0	1/1:6,6:10:9.03:213,9,0	1/1:2,3:5:9.03:189,9,0	0/0:23,0:23:48.14:0,48,778	0/0:26,0:26:51.13:0,51,813	1/1:6,0:6:15.03:181,15,0	0/0:6,0:5:9.02:0,9,97	0/0:25,0:23:54.05:0,54,713	0/0:12,0:12:21.04:0,21,326	0/0:37,0:35:87.24:0,87,1373	0/0:25,0:25:48.08:0,48,699	0/0:16,0:16:27.06:0,27,407	0/0:24,0:23:60.12:0,60,966	0/0:11,0:11:15.05:0,15,247	0/0:22,0:21:36.11:0,36,554	0/0:17,0:14:33.06:0,33,516	0/0:9,0:9:27.05:0,27,427
chr10	85309546	.	GCA	G	2571.72	PASS	AB=0.816;AC=37;AF=0.712;AN=52;BaseQRankSum=9.287;DP=570;FS=0.000;HRun=0;HaplotypeScore=106.9894;InbreedingCoeff=-0.0689;MQ=58.05;MQ0=16;MQRankSum=-3.596;QD=5.30;ReadPosRankSum=-3.288;VQSLOD=2.1759;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:5.26:55,0,5	1/1:7,0:10:5.68:28,6,0	./.	./.	0/1:13,1:15:16.11:16,0,127	0/1:12,1:13:42.56:43,0,166	1/1:10,0:17:2.80:13,3,0	1/1:15,1:15:3.01:30,3,0	0/1:19,1:20:26.42:26,0,401	0/1:9,0:17:19.16:62,0,19	1/1:9,0:12:14.20:70,14,0	1/1:6,0:29:45.08:216,45,0	1/1:6,0:17:19.89:98,20,0	1/1:8,0:18:16.71:78,17,0	1/1:8,0:22:31.25:154,31,0	0/1:13,1:22:15.01:102,0,15	0/1:14,0:19:5.17:5,0,34	1/1:9,0:23:28.26:139,28,0	0/0:5,0:5:6.47:0,6,69	1/1:12,15:29:41.77:415,42,0	1/1:25,8:31:46.10:387,46,0	0/0:21,1:22:6.16:0,6,465	0/1:8,3:11:80.66:81,0,115	0/1:34,5:38:99:116,0,647	0/1:7,7:14:47.84:48,0,160	0/1:11,0:21:4.44:72,0,4	1/1:7,12:21:38.36:361,38,0	1/1:6,7:13:11.86:113,12,0
chr10	85309580	.	ACACACACG	A	1659	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=11.316;DP=609;FS=3.584;HRun=0;HaplotypeScore=176.2717;InbreedingCoeff=0.1276;MQ=54.64;MQ0=16;MQRankSum=-10.567;QD=10.37;ReadPosRankSum=3.277;VQSLOD=2.7319;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,5:29:39.01:638,39,0	0/0:9,0:9:7.12:0,7,101	0/0:25,0:12:15.44:0,15,229	0/1:18,0:8:5.48:5,0,53	0/0:21,0:21:59.53:0,60,1009	0/0:18,0:17:51.04:0,51,1144	0/1:11,0:11:35.37:35,0,37	0/0:21,0:19:56.69:0,57,763	0/0:17,0:17:45.14:0,45,1640	0/1:27,0:26:2.46:2,0,271	0/1:13,0:13:2.58:3,0,111	0/1:29,0:29:10.63:604,0,11	0/1:16,0:16:49.88:261,0,50	0/1:17,0:16:38.90:245,0,39	0/0:24,0:23:21.29:0,21,352	0/0:20,0:19:26.14:0,26,372	0/0:17,0:16:16.95:0,17,150	0/0:23,0:23:47.59:0,48,440	0/0:13,0:12:38.23:0,38,453	0/0:28,0:28:59.21:0,59,1145	0/0:37,0:34:73.33:0,73,1331	0/0:26,0:26:56.18:0,56,1590	0/0:11,0:11:30.06:0,30,747	0/0:40,0:39:99:0,99,2745	0/0:20,0:20:20.96:0,21,798	0/0:32,0:32:79.21:0,79,813	0/0:26,0:26:57.20:0,57,929	0/0:21,0:20:40.86:0,41,606
chr10	85309586	.	ACG	A	744.28	PASS	AB=0.984;AC=14;AF=0.250;AN=56;BaseQRankSum=10.210;DP=599;FS=43.294;HRun=0;HaplotypeScore=116.1025;InbreedingCoeff=-0.1215;MQ=55.54;MQ0=14;MQRankSum=-0.708;QD=2.42;ReadPosRankSum=2.584;VQSLOD=0.5772;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:47.69:353,48,0	0/0:9,0:9:17.41:0,17,133	0/0:23,0:13:11.61:0,12,223	0/1:16,0:8:9.31:9,0,51	0/0:24,0:24:35.17:0,35,492	0/1:17,1:17:18.94:19,0,337	0/0:12,0:12:7.70:0,8,68	0/0:27,0:25:56.91:0,57,473	0/0:19,0:19:25.02:0,25,626	0/0:24,0:23:36.41:0,36,303	0/0:13,0:13:19.81:0,20,143	0/0:30,0:30:12.14:0,12,111	0/0:16,0:16:9.09:0,9,82	0/1:17,0:16:4.30:4,0,49	0/0:24,0:23:19.47:0,19,161	0/0:18,0:17:2.98:0,3,126	0/0:15,0:14:23.68:0,24,155	0/1:23,0:23:5.87:6,0,128	0/0:14,0:13:25.42:0,25,274	0/1:25,2:27:95.44:162,0,95	0/1:38,0:35:99:111,0,270	0/0:24,0:24:39.75:0,40,685	0/1:14,0:14:40.17:40,0,255	0/1:36,1:36:38.42:38,0,877	0/1:19,0:19:5.45:5,0,297	0/1:30,0:30:19.43:19,0,427	0/1:24,1:25:99:126,0,122	0/1:20,0:19:0.75:1,0,185
chr10	85310492	.	G	GC	5992.27	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=16.769;DP=702;FS=0.745;HRun=0;HaplotypeScore=93.6723;InbreedingCoeff=0.9914;MQ=86.82;MQ0=0;MQRankSum=-4.840;QD=45.74;ReadPosRankSum=2.486;VQSLOD=4.4784;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:64:99:0,190,2617	0/0:13,0:13:39.13:0,39,545	0/0:22,0:22:63.12:0,63,853	0/0:26,0:26:69.21:0,69,924	0/0:20,0:20:57.18:0,57,778	0/0:25,0:25:75.25:0,75,1046	1/1:1,44:45:99:2062,129,0	0/0:26,0:26:72.24:0,72,1003	0/0:27,0:27:81.27:0,81,1133	0/0:26,0:26:72.24:0,72,1007	0/0:16,0:16:48.16:0,48,669	1/1:0,38:38:99:1775,111,0	1/1:0,20:20:57.19:908,57,0	1/1:1,27:28:78.27:1247,78,0	0/0:23,0:23:69.23:0,69,965	0/0:22,0:22:66.20:0,66,905	0/0:35,0:35:99:0,105,1468	0/0:23,0:23:69.21:0,69,947	0/0:24,0:24:72.24:0,72,1005	0/0:13,0:13:39.13:0,39,545	0/0:50,0:50:99:0,141,1953	0/0:15,0:15:45.15:0,45,627	0/0:16,0:16:42.14:0,42,576	0/0:25,0:25:72.24:0,72,1007	0/0:16,0:16:48.16:0,48,667	0/0:18,0:18:45.44:0,45,667	0/0:22,0:22:66.22:0,66,919	0/0:4,0:4:12.04:0,12,168
chr10	85311807	.	AT	A	429.93	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.456;DP=434;FS=26.033;HRun=3;HaplotypeScore=72.6807;InbreedingCoeff=0.9697;MQ=85.86;MQ0=0;MQRankSum=-0.882;QD=11.31;ReadPosRankSum=0.037;VQSLOD=0.4892;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.87:0,64,576	0/0:13,0:13:39.01:0,39,358	0/0:22,0:20:16.46:0,16,425	0/0:14,0:14:15.38:0,15,176	0/0:15,0:15:42.60:0,43,579	0/0:12,0:12:33.04:0,33,448	1/1:2,4:6:17.94:141,18,0	0/0:13,0:13:36.09:0,36,444	0/0:15,0:15:42.58:0,43,565	0/0:16,0:16:45.08:0,45,459	0/0:16,0:16:38.89:0,39,338	1/1:7,0:7:8.78:60,9,0	1/1:3,9:12:31.30:220,31,0	1/1:6,7:13:23.13:164,23,0	0/0:21,0:21:57.09:0,57,772	0/0:13,0:13:39.12:0,39,541	0/0:29,0:29:86.84:0,87,843	0/0:21,0:21:60.15:0,60,802	0/0:21,0:21:47.84:0,48,585	0/0:16,0:16:42.09:0,42,525	0/0:6,0:6:18.06:0,18,257	0/0:11,0:11:33.06:0,33,401	0/0:14,0:14:42.04:0,42,513	0/0:12,0:12:33.11:0,33,474	0/0:14,0:14:39.13:0,39,540	0/0:24,0:24:72.03:0,72,883	0/0:17,0:17:45.15:0,45,645	0/0:18,0:18:54.09:0,54,696
chr10	85311810	.	T	TA	2110.57	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=-0.246;DP=455;FS=9.310;HRun=10;HaplotypeScore=69.8159;InbreedingCoeff=0.7253;MQ=84.26;MQ0=0;MQRankSum=-0.137;QD=13.98;ReadPosRankSum=-1.492;VQSLOD=2.7311;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:27:62.93:345,63,0	1/1:1,13:14:36.09:380,36,0	0/1:24,0:19:17.72:18,0,82	0/0:16,0:16:8.01:0,8,70	0/0:16,0:17:43.21:0,43,333	0/0:14,0:14:29.93:0,30,246	0/0:7,0:7:3.59:0,4,11	0/0:14,0:14:20.96:0,21,172	0/0:14,0:14:37.77:0,38,300	1/1:5,14:19:42.06:430,42,0	1/1:1,12:14:38.86:373,39,0	1/1:8,0:8:2.36:18,2,0	0/0:13,0:13:7.59:0,8,23	0/1:16,0:16:5.30:5,0,13	0/0:21,0:21:51.37:0,51,416	0/0:13,0:13:38.94:0,39,318	1/1:6,23:29:31.84:723,32,0	0/0:21,0:21:53.90:0,54,439	0/0:16,1:17:5.93:0,6,238	0/0:18,0:18:40.34:0,40,301	0/0:6,0:6:17.98:0,18,148	0/0:11,0:11:16.11:0,16,161	0/0:15,0:15:38.27:0,38,296	0/0:13,0:13:35.91:0,36,289	0/0:14,0:14:16.57:0,17,288	0/0:23,1:24:27.99:0,28,418	0/0:17,0:17:44.91:0,45,363	0/0:19,0:19:43.90:0,44,342
chr10	85311820	.	AC	A	905.10	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.404;DP=458;FS=12.786;HRun=1;HaplotypeScore=68.8907;InbreedingCoeff=0.9426;MQ=78.57;MQ0=0;MQRankSum=-2.489;QD=17.75;ReadPosRankSum=-4.012;VQSLOD=1.8911;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:71.48:0,71,381	0/0:13,0:13:33.62:0,34,195	0/0:20,1:16:19.19:0,19,328	0/0:12,0:12:16.13:0,16,166	0/0:19,0:19:52.92:0,53,603	0/0:14,0:14:42.09:0,42,498	1/1:10,4:14:42:385,42,0	0/0:13,0:13:36.07:0,36,395	0/0:15,0:15:31.10:0,31,484	0/0:20,0:20:52.96:0,53,355	0/0:14,0:14:8.14:0,8,166	1/1:1,6:7:5.98:58,6,0	1/1:6,8:14:41.18:346,41,0	1/1:2,14:16:29.92:269,30,0	0/0:23,0:23:50.21:0,50,757	0/0:13,0:13:39.10:0,39,474	0/0:30,0:31:77.32:0,77,469	0/0:18,0:18:54.14:0,54,655	0/0:16,0:16:28.97:0,29,428	0/0:16,0:16:33.14:0,33,541	0/0:8,0:8:24.03:0,24,260	0/0:8,0:8:18.95:0,19,260	0/0:14,0:14:39.04:0,39,434	0/0:15,0:15:45.09:0,45,519	0/0:15,0:15:28.02:0,28,479	0/0:24,0:24:72.02:0,72,784	0/0:17,0:17:45.11:0,45,538	0/0:17,0:17:45.78:0,46,518
chr10	85312553	.	GTGAA	G	623.54	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.858;DP=675;FS=2.142;HRun=0;HaplotypeScore=114.3570;InbreedingCoeff=0.9910;MQ=61.74;MQ0=2;MQRankSum=0.804;QD=31.18;ReadPosRankSum=2.427;VQSLOD=3.8661;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,15:20:45.07:718,45,0	0/0:16,0:16:42.11:0,42,944	0/0:26,0:24:31.27:0,31,592	0/0:18,0:18:30.10:0,30,699	0/0:30,0:30:69.20:0,69,1592	0/0:25,0:25:63.22:0,63,1504	0/0:22,0:22:45.12:0,45,999	0/0:38,0:38:78.27:0,78,1898	0/0:21,0:21:51.13:0,51,1194	0/0:27,0:27:72.25:0,72,1758	0/0:24,0:24:57.20:0,57,1394	0/0:28,0:28:72.25:0,72,1718	0/0:31,0:31:78.22:0,78,1800	0/0:22,0:22:48.15:0,48,1108	0/0:31,0:31:72.25:0,72,1762	0/0:37,0:37:78.21:0,78,1762	0/0:16,0:16:39.13:0,39,896	0/0:21,0:21:57.20:0,57,1408	0/0:17,0:17:18.06:0,18,448	0/0:19,0:19:42.14:0,42,1014	0/0:26,0:25:60.21:0,60,1463	0/0:23,0:23:63.22:0,63,1532	0/0:23,0:23:57.17:0,57,1336	0/0:24,0:24:66.23:0,66,1599	0/0:26,0:26:66.23:0,66,1623	0/0:22,0:22:48.16:0,48,1126	0/0:25,0:25:66.23:0,66,1575	0/0:17,0:17:45.15:0,45,1101
chr10	85313191	.	TAGAGAGAGAGAGAGAG	T	1047.73	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=4.204;DP=616;FS=2.831;HRun=0;HaplotypeScore=221.3071;InbreedingCoeff=0.6042;MQ=68.15;MQ0=23;MQRankSum=-2.231;QD=10.27;ReadPosRankSum=1.492;VQSLOD=2.6540;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:14.54:0,15,697	0/0:14,0:13:11.83:0,12,373	0/1:51,0:21:3.26:3,0,21	0/0:60,0:14:4.04:0,4,16	0/0:13,0:12:9.03:0,9,202	0/0:23,0:22:30.10:0,30,1688	0/0:19,0:18:5.99:0,6,48	0/0:28,0:28:13.60:0,14,545	0/0:17,0:19:15.05:0,15,707	0/0:22,0:22:24.06:0,24,1144	0/0:15,0:15:11.85:0,12,572	1/1:16,2:19:14.23:427,14,0	1/1:15,3:18:6.49:262,6,0	1/1:10,2:14:12.04:484,12,0	0/0:27,0:27:24.08:0,24,1311	0/0:26,0:26:12.04:0,12,758	0/0:19,0:19:24.08:0,24,1291	0/0:28,0:26:51.17:0,51,3180	0/0:21,0:21:22.32:0,22,1195	0/0:18,0:18:15.05:0,15,889	0/0:21,0:21:6.02:0,6,383	0/0:17,0:17:12.01:0,12,475	0/0:18,0:18:3.01:0,3,116	0/0:13,0:18:18.06:0,18,801	0/0:14,0:14:15.02:0,15,571	0/0:18,0:17:15.05:0,15,942	0/0:17,0:17:13.26:0,13,788	0/0:6,0:6:6.02:0,6,367
chr10	85313228	.	A	AGG	2623.47	PASS	AB=0.767;AC=21;AF=0.375;AN=56;BaseQRankSum=3.166;DP=634;FS=3.460;HRun=1;HaplotypeScore=101.3713;InbreedingCoeff=0.3416;MQ=55.63;MQ0=22;MQRankSum=1.548;QD=7.07;ReadPosRankSum=-0.303;VQSLOD=0.1358;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:38.91:0,39,302	0/1:15,0:13:10.01:104,0,10	0/1:31,0:7:1.23:1,0,99	0/0:47,0:17:22.61:0,23,230	0/0:19,0:18:44.22:0,44,351	0/0:26,0:25:59.89:0,60,500	0/0:16,0:15:13.94:0,14,226	1/1:31,0:31:25.99:399,26,0	0/0:17,0:17:44.78:0,45,359	0/1:10,20:30:99:245,0,120	0/1:19,0:19:35.38:132,0,35	0/0:16,0:16:29.03:0,29,198	0/0:9,0:9:11.84:0,12,86	0/0:14,0:14:32.65:0,33,240	0/1:8,29:37:61.44:147,0,61	0/1:3,0:29:16.40:76,0,16	0/1:8,0:20:42.23:42,0,103	0/1:28,0:26:99:115,0,129	1/1:16,0:16:23.31:265,23,0	1/1:22,0:22:15.12:214,15,0	1/1:30,0:29:41.69:349,42,0	0/0:15,0:15:26.95:0,27,222	0/0:16,0:16:32.85:0,33,262	0/0:24,0:23:47.90:0,48,390	0/0:19,0:19:32.96:0,33,278	1/1:0,0:20:48.49:421,48,0	0/1:8,0:26:25.35:25,0,28	1/1:17,0:15:30.66:281,31,0
chr10	85316430	.	C	CAA	2469.62	PASS	AB=0.747;AC=28;AF=0.583;AN=48;BaseQRankSum=0.506;DP=326;FS=3.386;HRun=11;HaplotypeScore=54.9012;InbreedingCoeff=0.5932;MQ=49.90;MQ0=17;MQRankSum=-1.271;QD=10.04;ReadPosRankSum=0.713;VQSLOD=1.0186;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,4:23:29.90:219,30,0	1/1:1,4:6:14.54:182,15,0	0/0:6,0:2:5.67:0,6,28	0/1:9,0:3:0:0,0,0	0/0:9,0:9:21.02:0,21,203	0/0:18,0:18:36.02:0,36,348	./.	1/1:19,7:24:30.51:380,31,0	0/0:9,0:9:11.94:0,12,109	1/1:4,6:10:20.51:244,21,0	1/1:9,6:17:16.25:176,16,0	./.	./.	./.	1/1:5,4:9:9.03:131,9,0	1/1:8,1:9:3.01:44,3,0	1/1:7,9:20:26.63:309,27,0	0/1:7,0:13:18.31:18,0,42	0/1:15,1:23:47.32:115,0,47	1/1:3,1:11:17.98:95,18,0	1/1:2,0:8:9.98:34,10,0	0/0:3,0:2:3:0,3,29	0/0:5,0:5:5.97:0,6,58	0/0:15,0:14:11.95:0,12,124	0/0:14,0:14:11.84:0,12,166	1/1:11,11:21:33.58:479,34,0	0/1:7,1:15:5.15:80,0,5	1/1:4,5:9:11.40:139,11,0
chr10	85317170	.	GGTGTGT	G	1180.14	PASS	AB=0.759;AC=22;AF=0.500;AN=44;BaseQRankSum=3.579;DP=555;FS=3.115;HRun=0;HaplotypeScore=155.1799;InbreedingCoeff=0.4643;MQ=49.86;MQ0=38;MQRankSum=-2.165;QD=4.04;ReadPosRankSum=-0.861;VQSLOD=2.5234;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:8:0:0,0,0	1/1:8,2:11:5.90:22,6,0	./.	./.	0/0:19,0:20:19.96:0,20,408	0/0:18,0:18:15.05:0,15,317	./.	./.	0/0:16,0:17:12.04:0,12,311	0/0:20,0:19:3.73:0,4,16	1/1:16,1:16:4.31:22,4,0	./.	1/1:1,0:1:3.01:42,3,0	./.	0/1:21,0:39:1.76:36,0,2	1/1:19,0:33:9.03:126,9,0	0/1:26,1:25:5.21:137,0,5	1/1:15,3:14:3.01:60,3,0	1/1:18,4:20:8.25:118,8,0	0/1:15,6:20:0:0,0,0	1/1:24,0:21:2.65:42,3,0	0/0:11,0:13:8.06:0,8,126	0/0:14,1:21:1.50:0,1,23	0/0:38,0:38:56.56:0,57,1425	0/0:15,0:20:20.08:0,20,478	1/1:26,8:33:18.06:351,18,0	1/1:20,3:22:7.59:128,8,0	0/1:9,9:16:29.04:243,0,29
chr10	85317750	.	ACT	A	2531.61	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.638;DP=563;FS=14.276;HRun=0;HaplotypeScore=73.1741;InbreedingCoeff=0.9913;MQ=78.64;MQ0=0;MQRankSum=-2.568;QD=35.66;ReadPosRankSum=3.934;VQSLOD=4.7873;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,2022	0/0:8,0:8:24.08:0,24,440	0/0:13,0:13:36.09:0,36,580	0/0:18,0:18:14.26:0,14,679	0/0:28,0:28:78.27:0,78,1461	0/0:19,0:19:57.20:0,57,1067	1/1:0,10:10:24.08:353,24,0	0/0:26,0:26:75.26:0,75,1378	0/0:15,0:15:45.15:0,45,837	0/0:15,0:15:45.15:0,45,842	0/0:18,0:18:51.17:0,51,955	1/1:1,21:22:54.18:793,54,0	1/1:0,15:15:42.14:618,42,0	1/1:1,23:24:63.21:927,63,0	0/0:32,0:32:96.33:0,96,1798	0/0:20,0:20:60.19:0,60,1093	0/0:30,0:30:87.30:0,87,1616	0/0:18,0:18:51.17:0,51,955	0/0:15,0:15:45.15:0,45,838	0/0:27,0:27:78.27:0,78,1461	0/0:30,0:30:87.30:0,87,1621	0/0:23,0:23:69.22:0,69,1260	0/0:18,0:18:51.17:0,51,946	0/0:18,0:18:51.16:0,51,916	0/0:17,0:17:51.17:0,51,955	0/0:15,0:15:42.14:0,42,787	0/0:26,0:26:78.25:0,78,1420	0/0:6,0:6:18.06:0,18,330
chr10	85318019	.	T	TAC	1743.24	PASS	AB=0.938;AC=9;AF=0.161;AN=56;BaseQRankSum=-8.242;DP=454;FS=5.328;HRun=0;HaplotypeScore=51.0117;InbreedingCoeff=0.8414;MQ=70.25;MQ0=0;MQRankSum=-1.227;QD=22.64;ReadPosRankSum=2.241;VQSLOD=3.5726;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:42.13:0,42,530	0/0:2,0:2:6.02:0,6,76	0/0:16,0:15:33.09:0,33,403	0/0:9,0:8:11.99:0,12,128	0/0:25,0:25:75.20:0,75,928	0/0:28,0:28:69.14:0,69,835	1/1:2,8:11:18.06:299,18,0	0/0:24,0:24:63.16:0,63,777	0/0:12,0:12:36.10:0,36,441	0/1:14,1:15:10.79:11,0,403	0/0:11,0:11:30.09:0,30,366	1/1:1,13:14:33.11:549,33,0	1/1:7,17:24:39.13:648,39,0	1/1:4,9:13:24.08:399,24,0	0/0:16,0:16:39.12:0,39,492	0/0:17,0:17:42.12:0,42,517	0/0:21,0:21:48.15:0,48,606	0/0:24,0:24:66.19:0,66,819	0/0:26,0:26:48.15:0,48,606	0/0:16,0:16:45.14:0,45,567	0/0:8,0:8:21.07:0,21,265	0/0:13,0:13:30.10:0,30,379	0/0:15,0:15:39.12:0,39,490	0/0:11,0:11:27.09:0,27,341	0/0:15,0:15:45.14:0,45,567	0/0:19,0:19:57.17:0,57,705	0/0:22,0:22:60.19:0,60,757	0/0:9,0:9:27.09:0,27,341
chr10	85318718	.	TGGA	T	3731.95	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.009;DP=746;FS=4.830;HRun=0;HaplotypeScore=106.7082;InbreedingCoeff=0.9977;MQ=93.46;MQ0=0;MQRankSum=-4.633;QD=34.24;ReadPosRankSum=2.924;VQSLOD=4.2600;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,105,2147	0/0:6,0:6:18.06:0,18,402	0/0:34,0:34:90.13:0,90,1646	0/0:34,0:34:92.20:0,92,1638	0/0:37,0:37:99:0,102,2137	0/0:20,0:20:48.16:0,48,1068	1/1:2,31:31:54.18:881,54,0	0/0:29,0:29:84.25:0,84,1662	0/0:27,0:27:81.26:0,81,1766	0/0:23,0:23:66.22:0,66,1424	0/0:23,0:23:66.22:0,66,1425	1/1:2,23:25:54.12:850,54,0	1/1:1,26:27:66.10:1072,66,0	1/1:3,21:24:57.19:929,57,0	0/0:22,0:22:66.21:0,66,1432	0/0:33,0:33:90.29:0,90,1923	0/0:25,0:25:72.20:0,72,1476	0/0:28,0:28:81.26:0,81,1762	0/0:30,0:30:78.23:0,78,1554	0/0:21,0:21:63.19:0,63,1319	0/0:25,0:25:63.20:0,63,1321	0/0:36,0:36:99:0,99,2021	0/0:15,0:15:45.15:0,45,982	0/0:37,0:37:99:0,108,2352	0/0:22,0:22:63.22:0,63,1374	0/0:32,0:32:93.31:0,93,2018	0/0:26,0:26:75.25:0,75,1630	0/0:12,0:12:36.11:0,36,761
chr10	85319816	.	A	AT	2428.67	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.022;DP=541;FS=0.499;HRun=2;HaplotypeScore=60.2950;InbreedingCoeff=0.9984;MQ=82.59;MQ0=0;MQRankSum=-3.647;QD=37.95;ReadPosRankSum=0.483;VQSLOD=4.0968;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:58.74:0,59,718	0/0:7,0:7:21.07:0,21,260	0/0:18,0:18:51.16:0,51,622	0/0:17,0:18:45.14:0,45,550	0/0:28,0:28:81.25:0,81,1004	0/0:19,0:19:48.14:0,48,582	1/1:2,9:11:27.09:389,27,0	0/0:29,0:29:81.23:0,81,972	0/0:21,0:21:60.19:0,60,744	0/0:25,0:25:66.20:0,66,808	0/0:17,0:17:51.16:0,51,632	1/1:2,15:17:48.16:691,48,0	1/1:2,18:20:57.19:818,57,0	1/1:0,16:16:48.16:691,48,0	0/0:21,0:21:63.19:0,63,768	0/0:14,0:14:42.13:0,42,520	0/0:20,0:20:57.18:0,57,706	0/0:21,0:21:63.20:0,63,781	0/0:27,0:27:78.24:0,78,967	0/0:18,0:18:54.17:0,54,670	0/0:26,0:26:78.25:0,78,966	0/0:10,0:10:30.09:0,30,372	0/0:23,0:23:69.22:0,69,855	0/0:17,0:17:51.16:0,51,632	0/0:15,0:15:42.13:0,42,521	0/0:22,0:21:63.19:0,63,769	0/0:23,0:23:66.21:0,66,817	0/0:16,0:16:48.15:0,48,595
chr10	85319880	.	A	AT	1775.23	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.659;DP=521;FS=1.138;HRun=5;HaplotypeScore=55.6125;InbreedingCoeff=0.9948;MQ=78.54;MQ0=0;MQRankSum=-2.403;QD=29.59;ReadPosRankSum=1.182;VQSLOD=4.1513;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.14:0,57,613	0/0:5,0:5:15.04:0,15,161	0/0:22,0:21:54.13:0,54,580	0/0:17,0:17:33.12:0,33,439	0/0:31,0:31:90.22:0,90,967	0/0:20,0:20:60.15:0,60,644	1/1:2,8:10:27.08:340,27,0	0/0:25,0:25:72.18:0,72,774	0/0:15,0:15:36.06:0,36,376	0/0:23,0:23:57.14:0,57,613	0/0:14,0:14:39.10:0,39,419	1/1:2,13:15:39.06:491,39,0	1/1:2,12:14:36.12:473,36,0	1/1:3,18:21:48.16:631,48,0	0/0:21,0:21:63.16:0,63,677	0/0:21,0:21:60.14:0,60,637	0/0:13,0:13:30.07:0,30,321	0/0:23,0:23:61.97:0,62,650	0/0:22,0:22:51.12:0,51,548	0/0:12,0:12:36.08:0,36,378	0/0:22,0:22:63.11:0,63,657	0/0:14,0:14:42.09:0,42,439	0/0:22,0:22:63.11:0,63,657	0/0:15,0:15:42.10:0,42,451	0/0:11,0:11:33.08:0,33,354	0/0:29,0:29:84.19:0,84,894	0/0:29,0:29:87.20:0,87,927	0/0:15,0:15:39.10:0,39,419
chr10	85320687	.	CT	C	1515.72	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=11.453;DP=546;FS=3.581;HRun=10;HaplotypeScore=61.4323;InbreedingCoeff=0.8392;MQ=73.74;MQ0=1;MQRankSum=-0.174;QD=17.03;ReadPosRankSum=0.228;VQSLOD=4.1980;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.09:0,42,448	0/0:10,0:10:27.07:0,27,298	0/0:16,0:13:17.61:0,18,162	0/1:13,0:11:13.05:13,0,91	0/0:28,0:28:75.17:0,75,812	0/0:22,1:24:42.96:0,43,685	1/1:3,20:23:56.98:495,57,0	0/0:27,0:27:51.12:0,51,549	0/0:22,0:22:63.15:0,63,681	0/0:19,0:19:57.15:0,57,630	0/0:20,0:21:53.98:0,54,578	1/1:0,18:18:50.99:443,51,0	1/1:0,16:16:41.99:365,42,0	1/1:2,17:19:41.99:365,42,0	0/0:16,0:16:42.11:0,42,465	0/0:23,0:23:60.16:0,60,664	0/0:23,0:24:59.24:0,59,691	0/0:23,0:23:63.17:0,63,696	0/0:18,0:18:36.09:0,36,390	0/0:32,0:32:58.03:0,58,851	0/0:16,0:16:42.09:0,42,449	0/0:14,0:15:38.94:0,39,412	0/0:21,0:21:42.11:0,42,465	0/0:12,0:12:4.40:0,4,252	0/0:21,0:21:60.16:0,60,664	0/0:14,0:14:33.09:0,33,365	0/0:26,0:26:69.15:0,69,750	0/0:13,0:13:29.87:0,30,287
chr10	85321009	.	GA	G	372.39	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.887;DP=494;FS=7.744;HRun=9;HaplotypeScore=52.3742;InbreedingCoeff=0.9338;MQ=69.73;MQ0=0;MQRankSum=-1.401;QD=14.90;ReadPosRankSum=0.101;VQSLOD=3.1017;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:25:29.51:467,30,0	0/0:7,0:7:21.06:0,21,242	0/0:11,0:8:18.05:0,18,201	0/0:14,0:13:10.41:0,10,110	0/0:30,0:30:87.26:0,87,1003	0/0:23,0:23:66.18:0,66,751	0/0:16,0:16:45.13:0,45,519	0/0:23,0:23:45.10:0,45,486	0/0:17,0:17:51.14:0,51,578	0/0:27,0:27:75.21:0,75,854	0/0:22,0:23:60:0,60,663	0/0:13,0:13:39.12:0,39,449	0/0:21,0:21:57.16:0,57,647	0/0:8,0:8:21.06:0,21,242	0/0:17,0:17:51.15:0,51,589	0/0:17,0:17:42.12:0,42,485	0/0:15,0:15:45.13:0,45,519	0/0:19,0:19:57.17:0,57,657	0/0:24,0:24:38.68:0,39,667	0/0:18,0:18:51.15:0,51,588	0/0:9,0:9:24.07:0,24,277	0/0:14,0:14:42.12:0,42,485	0/0:14,0:14:39.12:0,39,450	0/0:12,0:12:36.10:0,36,411	0/0:16,0:16:36.07:0,36,401	0/0:25,0:25:54.15:0,54,614	0/0:30,0:30:87.26:0,87,1004	0/0:6,0:6:18.05:0,18,208
chr10	85321468	.	TGCTGCTGTC	T	4041.30	PASS	AB=0.574;AC=5;AF=0.089;AN=56;BaseQRankSum=10.753;DP=738;FS=1.194;HRun=0;HaplotypeScore=201.7033;InbreedingCoeff=0.7761;MQ=80.25;MQ0=0;MQRankSum=-11.340;QD=53.88;ReadPosRankSum=3.882;VQSLOD=3.6326;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:96.30:0,96,3708	0/0:12,0:12:33.11:0,33,1339	0/0:36,0:36:63.20:0,63,2131	0/0:32,0:32:58.07:0,58,1934	0/0:21,0:21:51.16:0,51,1818	0/0:15,0:15:45.15:0,45,1760	0/0:27,0:27:69.24:0,69,3096	0/0:31,0:31:57.17:0,57,1770	0/0:31,0:31:75.26:0,75,3277	0/0:24,0:24:51.17:0,51,1863	0/0:10,0:10:24.06:0,24,841	0/0:23,0:23:48.16:0,48,1983	0/0:24,0:24:60.21:0,60,2736	0/0:32,0:32:84.27:0,84,3759	1/1:3,22:25:60.21:1712,60,0	0/1:8,23:31:73.42:1731,0,73	0/0:38,0:38:99:0,102,4457	1/1:6,13:19:21.07:599,21,0	0/0:22,0:22:39.13:0,39,1438	0/0:20,0:20:39.13:0,39,1719	0/0:54,0:54:99:0,123,4698	0/0:25,0:25:60.18:0,60,1931	0/0:21,0:21:42.14:0,42,1393	0/0:34,0:34:99:0,102,4157	0/0:29,0:28:72.25:0,72,2584	0/0:23,0:23:45.15:0,45,1821	0/0:33,0:33:78.27:0,78,3249	0/0:8,0:8:21.07:0,21,973
chr10	85322275	.	TTCTC	T	285.16	PASS	AB=0.924;AC=12;AF=0.231;AN=52;BaseQRankSum=2.747;DP=600;FS=4.565;HRun=0;HaplotypeScore=125.5307;InbreedingCoeff=0.0689;MQ=60.03;MQ0=12;MQRankSum=-0.100;QD=1.25;ReadPosRankSum=-1.974;VQSLOD=1.9539;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:9.03:0,9,173	0/0:9,0:9:3.01:0,3,40	./.	./.	0/0:19,0:19:3.40:0,3,18	0/0:30,0:30:22.56:0,23,325	0/0:21,0:20:0:0,0,0	0/0:37,0:36:9.35:0,9,58	0/1:30,1:30:95.53:96,0,363	0/0:13,0:13:2.88:0,3,15	0/0:15,0:14:3:0,3,29	0/0:20,0:20:9.15:0,9,73	0/0:13,0:12:5.94:0,6,48	0/1:11,0:13:11.57:12,0,18	0/1:19,0:23:27.46:34,0,27	0/0:25,0:27:7.50:0,7,154	0/1:22,0:22:14.50:14,0,75	1/1:23,0:23:7.92:49,8,0	0/0:24,0:20:9.68:0,10,70	0/1:21,10:31:3:71,0,3	0/1:23,0:20:0.34:1,0,0	0/0:14,0:14:6.28:0,6,85	0/0:18,0:18:17.84:0,18,196	0/0:18,0:16:25.99:0,26,544	0/0:25,0:24:3.48:0,3,71	1/1:27,0:27:6.43:32,6,0	0/1:13,1:16:18.29:38,0,18	0/1:18,0:16:61.09:73,0,61
chr10	85322398	.	C	CATT	2260.23	PASS	AB=0.598;AC=4;AF=0.071;AN=56;BaseQRankSum=11.565;DP=612;FS=4.747;HRun=0;HaplotypeScore=101.8338;InbreedingCoeff=0.0892;MQ=77.03;MQ0=0;MQRankSum=-11.141;QD=31.39;ReadPosRankSum=0.011;VQSLOD=3.8950;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.25:0,72,1322	0/0:12,0:12:36.12:0,36,665	0/0:17,0:17:45.13:0,45,758	0/0:13,0:13:39.06:0,39,606	0/0:31,0:31:93.30:0,93,1678	0/0:28,0:28:75.21:0,75,1303	0/1:7,13:20:89.83:735,0,90	0/0:28,0:28:84.28:0,84,1511	0/0:22,0:22:54.17:0,54,977	0/0:35,0:35:99:0,105,1880	0/0:22,0:22:60.20:0,60,1089	0/1:6,12:18:40.11:584,0,40	0/1:7,9:16:31.75:486,0,32	0/1:3,15:17:2.73:566,0,3	0/0:15,0:15:39.13:0,39,727	0/0:19,0:19:51.17:0,51,950	0/0:24,0:24:72.25:0,72,1341	0/0:28,0:28:72.25:0,72,1341	0/0:30,0:30:90.28:0,90,1557	0/0:30,0:30:90.27:0,90,1639	0/0:11,0:11:27.08:0,27,472	0/0:32,0:32:90.31:0,90,1664	0/0:28,0:28:81.26:0,81,1472	0/0:20,0:20:60.21:0,60,1111	0/0:14,0:14:42.11:0,42,719	0/0:19,0:19:57.20:0,57,1060	0/0:25,0:25:72.16:0,72,1301	0/0:9,0:9:24:0,24,330
chr10	85322400	.	T	TCCCC	2988.67	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.671;DP=617;FS=1.016;HRun=3;HaplotypeScore=110.4459;InbreedingCoeff=0.9977;MQ=75.08;MQ0=0;MQRankSum=-10.877;QD=41.51;ReadPosRankSum=-1.254;VQSLOD=1.0185;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.20:0,72,1463	0/0:12,0:12:36.11:0,36,717	0/0:15,0:15:32.23:0,32,599	0/0:12,0:12:26.26:0,26,493	0/0:32,0:32:96.30:0,96,1933	0/0:29,0:29:75.18:0,75,1452	1/1:7,13:20:60.09:1020,60,0	0/0:28,0:28:84.27:0,84,1656	0/0:25,0:25:69.15:0,69,1223	0/0:36,0:36:99:0,102,2096	0/0:22,0:22:66.18:0,66,1223	1/1:7,12:19:45:790,45,0	1/1:7,9:16:41.88:642,42,0	1/1:2,15:16:36.08:697,36,0	0/0:16,0:16:39.13:0,39,817	0/0:21,0:21:51.17:0,51,1033	0/0:25,0:25:75.22:0,75,1480	0/0:28,0:28:72.25:0,72,1508	0/0:27,0:27:81.26:0,81,1659	0/0:32,0:32:90.25:0,90,1842	0/0:10,0:10:24.08:0,24,503	0/0:33,0:33:96.29:0,96,1865	0/0:27,0:27:81.27:0,81,1661	0/0:21,0:21:60.18:0,60,1184	0/0:13,0:13:39.12:0,39,746	0/0:20,0:20:57.20:0,57,1195	0/0:26,0:26:72.23:0,72,1470	0/0:7,0:7:21.04:0,21,361
chr10	85322460	.	A	AAGAC	8318.09	PASS	AB=0.787;AC=24;AF=0.429;AN=56;BaseQRankSum=-7.186;DP=626;FS=13.536;HRun=0;HaplotypeScore=113.6156;InbreedingCoeff=0.8240;MQ=63.73;MQ0=3;MQRankSum=-1.932;QD=30.69;ReadPosRankSum=-1.018;VQSLOD=3.8817;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:27:15.05:268,15,0	0/0:14,0:14:30.10:0,30,478	0/0:14,0:11:9.03:0,9,143	0/0:16,0:12:5.85:0,6,95	0/0:26,0:26:48.16:0,48,760	0/0:22,0:22:39.08:0,39,569	0/1:12,3:15:21.07:335,0,21	1/1:21,11:32:34.34:611,34,0	0/0:28,0:28:60.20:0,60,941	0/0:29,0:29:51.16:0,51,766	0/0:25,0:25:48.16:0,48,762	1/1:12,5:17:33.11:782,33,0	0/1:13,6:20:10.11:667,0,10	1/1:8,6:14:24.08:523,24,0	0/0:1,0:15:24.03:0,24,224	0/0:3,0:24:48.05:0,48,447	0/0:39,0:39:80.83:0,81,1194	1/1:12,19:31:36.12:841,36,0	1/1:9,5:13:15.05:354,15,0	1/1:11,23:34:57.20:1336,57,0	1/1:8,7:14:9.03:215,9,0	0/0:36,0:36:69.22:0,69,1062	0/0:17,0:17:33.11:0,33,524	0/0:27,0:27:60.18:0,60,911	0/0:23,0:23:54.18:0,54,840	1/1:5,18:23:54.19:1179,54,0	1/1:7,15:22:32.95:779,33,0	1/1:1,5:6:18.06:429,18,0
chr10	85322501	.	A	AAAGT	3081.03	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=2.231;DP=608;FS=7.620;HRun=0;HaplotypeScore=123.2277;InbreedingCoeff=0.9948;MQ=61.10;MQ0=1;MQRankSum=-8.073;QD=37.12;ReadPosRankSum=-0.618;VQSLOD=3.6145;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:39.80:0,40,544	0/0:10,0:10:30.10:0,30,563	0/0:17,0:13:30.07:0,30,480	0/0:21,0:18:38.75:0,39,583	0/0:29,0:29:84.23:0,84,1475	0/0:29,0:29:81.18:0,81,1286	1/1:4,15:20:39.07:879,39,0	0/0:34,0:34:93.11:0,93,1471	0/0:22,0:22:66.20:0,66,1186	0/0:33,0:33:96.32:0,96,1778	0/0:18,0:18:51.16:0,51,913	1/1:8,14:22:19.01:765,19,0	1/1:2,20:22:39.10:956,39,0	1/1:4,14:19:28.31:641,28,0	0/0:17,0:17:39.11:0,39,667	0/0:23,0:23:60.18:0,60,1074	0/0:36,0:36:99:0,102,1638	0/0:21,0:21:51.08:0,51,801	0/0:16,0:16:41.96:0,42,615	0/0:31,0:31:93.23:0,93,1477	0/0:7,0:7:18:0,18,246	0/0:29,0:29:84.24:0,84,1433	0/0:15,0:15:45.14:0,45,821	0/0:25,0:25:72.18:0,72,1222	0/0:24,0:24:63.18:0,63,1154	0/0:20,0:20:54.18:0,54,990	0/0:22,0:22:58.22:0,58,897	0/0:9,0:9:24.08:0,24,417
chr10	85323131	.	GA	G	2402.70	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.105;DP=600;FS=3.583;HRun=3;HaplotypeScore=57.5654;InbreedingCoeff=0.9995;MQ=84.34;MQ0=0;MQRankSum=-1.773;QD=30.03;ReadPosRankSum=1.015;VQSLOD=3.2690;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.31:0,96,1363	0/0:10,0:10:30.10:0,30,432	0/0:20,0:20:57.15:0,57,779	0/0:16,0:16:36.03:0,36,458	0/0:37,0:37:99:0,108,1549	0/0:20,0:20:57.16:0,57,769	1/1:0,23:23:60.19:744,60,0	0/0:42,0:42:99:0,120,1678	0/0:24,0:24:72.22:0,72,1000	0/0:17,0:17:51.17:0,51,735	0/0:15,0:15:45.15:0,45,637	1/1:0,25:25:66.21:816,66,0	1/1:0,14:14:32.99:409,33,0	1/1:0,18:18:48.15:595,48,0	0/0:19,0:19:54.18:0,54,776	0/0:19,0:19:57.19:0,57,821	0/0:18,0:18:54.18:0,54,775	0/0:26,0:26:75.23:0,75,1059	0/0:20,0:19:60.19:0,60,848	0/0:24,0:24:66.19:0,66,899	0/0:10,0:10:30.10:0,30,432	0/0:23,0:23:69.22:0,69,965	0/0:18,0:18:51.15:0,51,714	0/0:21,0:21:63.16:0,63,863	0/0:22,0:22:66.22:0,66,950	0/0:23,0:23:66.22:0,66,951	0/0:32,0:32:93.27:0,93,1299	0/0:11,0:11:33.11:0,33,475
chr10	85323752	.	G	GGT	3898.03	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.126;DP=511;FS=1.557;HRun=0;HaplotypeScore=66.5213;InbreedingCoeff=0.9832;MQ=78.72;MQ0=0;MQRankSum=-1.149;QD=42.84;ReadPosRankSum=1.770;VQSLOD=5.2319;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,1783	0/0:10,0:10:30.09:0,30,431	0/0:19,0:19:48.06:0,48,618	0/0:14,0:14:28.47:0,28,383	0/0:18,0:18:54.13:0,54,778	0/0:10,0:10:30.09:0,30,429	1/1:1,26:27:63.21:1153,63,0	0/0:25,0:25:66.20:0,66,926	0/0:17,0:17:51.17:0,51,730	0/0:15,0:15:39.13:0,39,583	0/0:13,0:13:36.10:0,36,485	1/1:0,18:18:39.13:714,39,0	1/1:0,24:25:63.22:1153,63,0	1/1:1,20:21:48.16:878,48,0	0/0:24,0:24:72.23:0,72,1056	0/0:14,0:14:42.12:0,42,603	0/0:27,0:27:81.25:0,81,1189	0/0:24,0:24:66.22:0,66,993	0/0:21,0:21:51.17:0,51,735	0/0:19,0:19:52.99:0,53,768	0/0:13,0:13:39.06:0,39,510	0/0:16,0:16:45.09:0,45,619	0/0:12,0:12:30.10:0,30,449	0/0:13,0:13:36.12:0,36,548	0/0:14,0:14:42.10:0,42,576	0/0:20,0:20:57.19:0,57,850	0/0:15,0:15:45.15:0,45,680	0/0:3,0:3:9.03:0,9,138
chr10	85324504	.	T	TCC	5860.40	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-2.195;DP=397;FS=0.431;HRun=7;HaplotypeScore=54.3615;InbreedingCoeff=0.9808;MQ=79.95;MQ0=0;MQRankSum=-1.927;QD=25.59;ReadPosRankSum=0.207;VQSLOD=3.5730;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,11:13:30.10:492,30,0	1/1:1,0:5:7.86:31,8,0	0/0:19,0:17:39.06:0,39,425	0/0:14,0:13:21.06:0,21,244	0/0:20,0:20:54.14:0,54,617	0/0:26,0:26:63.17:0,63,734	1/1:0,0:12:29.82:105,30,0	1/1:6,18:25:51.13:771,51,0	0/0:9,0:9:21.06:0,21,245	1/1:3,0:13:25.26:92,25,0	1/1:1,0:9:17.88:64,18,0	1/1:0,0:6:14.97:53,15,0	1/1:3,0:18:34.93:122,35,0	1/1:2,1:11:25.34:128,25,0	0/0:13,0:13:33.09:0,33,384	0/0:8,0:8:24.07:0,24,280	1/1:1,0:13:27.45:97,27,0	1/1:2,20:22:57.19:915,57,0	1/1:3,12:15:36.12:574,36,0	1/1:3,11:14:27.09:442,27,0	1/1:2,6:8:15.05:246,15,0	0/0:10,0:10:27.05:0,27,294	0/0:18,0:18:45.11:0,45,514	0/0:12,0:12:33.10:0,33,385	0/0:19,0:19:54.16:0,54,629	1/1:3,10:14:32.60:496,33,0	1/1:3,19:22:51.17:837,51,0	1/1:1,8:9:24.08:394,24,0
chr10	85325060	.	A	AG	6480.78	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-6.770;DP=357;FS=0.000;HRun=7;HaplotypeScore=35.2750;InbreedingCoeff=0.9467;MQ=72.50;MQ0=0;MQRankSum=-1.266;QD=25.32;ReadPosRankSum=0.078;VQSLOD=4.3836;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:29:45.14:544,45,0	1/1:0,7:7:18.06:216,18,0	0/0:8,0:8:12.02:0,12,116	0/0:10,0:10:20.75:0,21,202	0/0:11,0:11:24.04:0,24,232	0/0:12,0:12:30.05:0,30,290	1/1:2,13:15:30.09:362,30,0	1/1:7,17:25:44.93:494,45,0	0/0:12,0:12:33.04:0,33,313	1/1:3,13:16:39.12:469,39,0	1/1:2,11:13:27.08:324,27,0	1/1:6,8:14:15.63:378,16,0	1/1:2,7:9:23.56:262,24,0	1/1:1,20:21:63.19:754,63,0	0/0:10,0:10:30.05:0,30,290	0/0:6,0:6:15.02:0,15,145	1/1:5,13:18:33.10:399,33,0	1/1:0,18:18:48.15:578,48,0	1/1:2,6:8:18.01:200,18,0	1/1:1,18:19:42.09:491,42,0	1/1:6,10:16:27.08:326,27,0	0/0:4,0:4:9.01:0,9,87	0/0:11,0:11:15.01:0,15,145	0/0:12,0:12:30.04:0,30,289	0/0:5,0:5:12.01:0,12,111	1/1:3,9:12:24.07:289,24,0	1/1:2,12:14:30.08:359,30,0	1/1:0,1:1:3.01:36,3,0
chr10	85325139	.	C	CACAAA	4323.31	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-4.870;DP=573;FS=11.825;HRun=0;HaplotypeScore=108.6833;InbreedingCoeff=0.9031;MQ=73.57;MQ0=3;MQRankSum=-4.616;QD=31.33;ReadPosRankSum=-0.177;VQSLOD=4.1225;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:67.03:0,67,1100	0/0:5,0:5:9.02:0,9,136	0/1:30,0:24:2.70:3,0,342	0/0:44,0:30:18.21:0,18,267	0/0:17,0:17:36.12:0,36,657	0/0:11,0:11:33.10:0,33,578	1/1:16,8:24:36.12:982,36,0	0/0:30,0:30:54.14:0,54,894	0/0:21,0:21:57.13:0,57,927	0/0:15,0:15:33.10:0,33,580	0/0:24,0:24:54.15:0,54,933	1/1:6,13:20:33.11:938,33,0	1/1:7,13:20:30.10:840,30,0	1/1:7,10:17:39.12:1037,39,0	1/1:6,0:13:9.03:196,9,0	1/1:8,0:14:15.05:327,15,0	0/0:25,0:25:57.17:0,57,1017	0/0:9,0:14:20.97:0,21,217	0/0:14,0:14:27.09:0,27,498	0/0:24,0:24:33.11:0,33,608	0/0:25,0:25:51.17:0,51,940	0/0:18,0:18:51.14:0,51,868	0/0:14,0:14:27.09:0,27,497	0/0:29,0:29:57.46:0,57,1101	0/0:17,0:17:51.17:0,51,925	0/0:28,0:28:60.09:0,60,1038	0/0:19,0:19:36.12:0,36,663	0/0:6,0:6:18.06:0,18,310
chr10	85325903	.	T	TA	4316.84	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-5.302;DP=521;FS=1.239;HRun=9;HaplotypeScore=59.8982;InbreedingCoeff=0.9852;MQ=81.68;MQ0=0;MQRankSum=-0.846;QD=20.27;ReadPosRankSum=-1.205;VQSLOD=4.9279;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:0,0:15:26.48:0,26,78	0/0:13,0:13:35.99:0,36,313	0/0:19,0:20:36.79:0,37,299	0/0:14,0:14:14.98:0,15,129	0/0:30,0:30:71.89:0,72,613	0/0:20,0:20:44.96:0,45,388	1/1:4,0:14:28.41:142,28,0	1/1:5,22:27:63.57:666,64,0	0/0:6,0:6:17.98:0,18,153	0/0:18,0:18:44.97:0,45,388	0/0:25,0:25:26.81:0,27,461	1/1:1,0:14:34.09:171,34,0	1/1:1,3:14:34.42:208,34,0	1/1:2,0:10:19.89:99,20,0	0/0:15,0:15:44.99:0,45,391	0/0:20,0:20:50.98:0,51,443	0/0:21,0:21:47.99:0,48,417	0/0:31,0:30:56.92:0,57,485	1/1:7,11:18:25.71:431,26,0	1/1:4,22:27:19.92:645,20,0	1/1:2,15:18:22.04:437,22,0	0/0:16,0:16:35.94:0,36,304	0/0:11,0:11:26.81:0,27,218	0/0:14,0:14:32.94:0,33,275	0/0:19,0:19:53.99:0,54,468	1/1:12,25:37:49.15:760,49,0	1/1:3,25:30:62.84:659,63,0	1/1:0,3:3:9.02:100,9,0
chr10	85326654	.	GA	G	5003.16	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.800;DP=756;FS=3.451;HRun=4;HaplotypeScore=74.6955;InbreedingCoeff=0.9994;MQ=87.32;MQ0=0;MQRankSum=-2.175;QD=31.87;ReadPosRankSum=1.805;VQSLOD=5.5261;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,55:58:99:1872,156,0	0/0:14,0:14:42.14:0,42,588	0/0:23,0:23:58.15:0,58,814	0/0:33,0:33:82.10:0,82,1071	0/0:33,0:33:90.27:0,90,1226	0/0:22,0:22:66.22:0,66,924	1/1:1,23:24:63.19:756,63,0	0/0:27,0:27:75.25:0,75,1036	0/0:23,0:23:63.21:0,63,880	0/0:31,0:31:90.30:0,90,1260	0/0:19,0:19:57.19:0,57,796	1/1:0,25:25:75.23:899,75,0	1/1:0,22:22:54.17:648,54,0	1/1:0,28:28:69.21:828,69,0	0/0:25,0:25:74.91:0,75,1004	0/0:28,0:28:84.28:0,84,1175	0/0:43,0:43:99:0,126,1763	0/0:27,0:27:81.21:0,81,1094	0/0:26,0:26:78.26:0,78,1092	0/0:22,0:22:60.13:0,60,840	0/0:39,0:39:99:0,114,1574	0/0:31,0:31:90.30:0,90,1260	0/0:28,0:28:78.25:0,78,1068	0/0:33,0:33:99:0,99,1369	0/0:23,0:23:69.23:0,69,965	0/0:21,1:22:24.19:0,24,762	0/0:17,0:17:51.17:0,51,713	0/0:10,0:10:30.10:0,30,412
chr10	85327422	.	CA	C	1210.32	PASS	AB=0.720;AC=12;AF=0.214;AN=56;BaseQRankSum=2.947;DP=485;FS=10.035;HRun=12;HaplotypeScore=61.7697;InbreedingCoeff=0.4978;MQ=78.86;MQ0=1;MQRankSum=0.165;QD=8.97;ReadPosRankSum=1.558;VQSLOD=1.7659;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:35:54.48:0,54,324	1/1:1,3:4:5.97:46,6,0	0/1:22,2:20:0.56:1,0,245	0/0:18,0:13:16:0,16,135	0/0:21,1:23:27.65:0,28,436	0/0:24,0:26:50.93:0,51,495	0/0:6,0:13:25.92:0,26,156	0/0:25,0:27:49.09:0,49,621	0/0:13,0:13:26.99:0,27,262	1/1:3,18:22:27.92:372,28,0	0/1:3,9:12:28:176,0,28	0/0:1,0:14:28.53:0,29,148	0/0:7,0:16:14.37:0,14,88	0/0:2,0:16:22.89:0,23,130	1/1:3,10:14:4.46:208,4,0	0/1:2,14:16:19.04:237,0,19	1/1:4,15:19:14.35:293,14,0	0/0:14,0:14:36.07:0,36,366	0/1:16,4:22:34.92:35,0,370	0/0:16,3:20:4.46:0,4,389	0/0:6,0:6:15.03:0,15,152	0/0:11,0:11:24.05:0,24,242	0/0:23,0:24:58.57:0,59,547	0/0:8,0:8:21.04:0,21,213	0/0:10,1:12:6.64:0,7,218	0/0:20,1:21:51.07:0,51,498	0/0:26,0:27:77.93:0,78,751	0/0:5,0:5:12.02:0,12,122
chr10	85329680	.	A	AAAAC	5350.14	PASS	AB=0.576;AC=13;AF=0.232;AN=56;BaseQRankSum=-12.432;DP=596;FS=6.931;HRun=0;HaplotypeScore=102.1634;InbreedingCoeff=0.8503;MQ=51.40;MQ0=19;MQRankSum=0.234;QD=32.43;ReadPosRankSum=-1.796;VQSLOD=4.0150;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:29:45.88:0,46,492	0/0:4,0:4:9.03:0,9,145	0/0:11,0:5:6.02:0,6,96	0/0:16,0:7:6.02:0,6,89	0/0:30,0:29:60.20:0,60,963	0/0:18,0:18:30.09:0,30,459	0/0:5,0:17:20.60:0,21,133	1/1:22,10:31:33.09:597,33,0	0/0:18,0:16:33.11:0,33,530	0/0:27,0:27:51.17:0,51,818	0/0:26,0:25:54.03:0,54,784	0/0:2,0:15:20.84:0,21,173	0/0:3,0:19:35.58:0,36,302	0/0:4,0:12:14.97:0,15,131	0/0:6,0:21:36.04:0,36,334	0/0:6,0:23:48.05:0,48,444	0/0:31,0:27:54.16:0,54,841	0/0:6,0:24:42.05:0,42,391	1/1:17,7:24:36.10:741,36,0	1/1:13,18:31:48.16:1129,48,0	0/1:5,13:19:15.09:689,0,15	0/0:19,0:19:45.15:0,45,723	0/0:22,0:22:45.14:0,45,701	0/0:19,0:18:39.12:0,39,591	0/0:21,0:21:42.14:0,42,675	1/1:6,13:19:42.13:955,42,0	1/1:9,15:25:33.01:738,33,0	1/1:3,6:9:21.07:502,21,0
chr10	85330495	.	AC	A	5126.95	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=1.673;DP=680;FS=11.992;HRun=9;HaplotypeScore=97.7851;InbreedingCoeff=0.9930;MQ=82.95;MQ0=0;MQRankSum=-1.622;QD=21.91;ReadPosRankSum=2.877;VQSLOD=4.5590;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:90.08:0,90,1007	0/0:2,0:6:14.37:0,14,92	0/0:26,2:25:20.83:0,21,566	0/0:24,0:24:25.40:0,25,349	0/0:42,2:44:86.43:0,86,1206	0/0:26,0:26:72.17:0,72,807	0/0:35,0:36:81.93:0,82,400	1/1:6,26:32:69:626,69,0	0/0:25,1:26:44.74:0,45,759	0/0:2,0:11:20.52:0,21,139	0/0:9,0:17:34.86:0,35,239	0/0:28,0:28:65.05:0,65,320	0/0:25,0:26:59.14:0,59,319	0/0:18,0:18:36.84:0,37,195	1/1:2,28:30:75.04:686,75,0	1/1:2,34:36:55.43:761,55,0	0/0:4,0:20:37.27:0,37,228	1/1:2,15:17:48.03:439,48,0	1/1:4,13:17:36:329,36,0	1/1:4,9:13:29.01:245,29,0	1/1:4,25:29:66.02:604,66,0	0/0:31,0:31:84.25:0,84,969	0/0:21,1:22:26.70:0,27,560	0/0:20,0:20:57.14:0,57,637	0/0:26,0:26:75.17:0,75,843	1/1:3,16:19:16.33:394,16,0	1/1:3,31:34:93.04:850,93,0	1/1:0,7:7:21.01:192,21,0
chr10	85330496	.	C	CA	3722.49	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=10.381;DP=681;FS=0.729;HRun=2;HaplotypeScore=105.2566;InbreedingCoeff=0.6012;MQ=82.83;MQ0=0;MQRankSum=-1.255;QD=22.42;ReadPosRankSum=0.239;VQSLOD=3.3671;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:96.90:0,97,1353	0/1:7,0:7:11.44:11,0,53	0/0:29,0:26:70.13:0,70,849	0/0:23,0:23:46.30:0,46,500	0/0:44,0:44:99:0,128,1589	0/0:25,0:25:75.24:0,75,1007	1/1:10,26:36:96.47:1204,96,0	0/0:32,0:32:65.94:0,66,521	0/0:25,0:25:75.16:0,75,1001	0/1:13,0:13:8.95:9,0,93	0/1:16,0:16:7.63:8,0,169	1/1:4,24:28:79.75:999,80,0	1/1:10,19:29:66.32:849,66,0	1/1:6,12:18:52.90:603,53,0	0/0:30,0:30:79.11:0,79,468	0/0:37,0:37:90.82:0,91,552	0/1:19,0:19:39.25:39,0,88	0/0:17,0:17:49.75:0,50,288	0/0:18,0:18:22.28:0,22,279	0/0:14,0:14:38.14:0,38,241	0/0:29,0:29:73.24:0,73,439	0/0:29,0:29:84.28:0,84,1168	0/0:21,0:21:39.16:0,39,752	0/0:19,0:19:57.19:0,57,777	0/0:26,0:26:78.21:0,78,1048	0/0:18,0:18:50.57:0,51,312	0/0:34,0:34:90.44:0,90,511	0/0:7,0:7:20.47:0,20,117
chr10	85330505	.	A	AC	4088.13	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.018;DP=695;FS=1.308;HRun=9;HaplotypeScore=106.3337;InbreedingCoeff=0.9982;MQ=83.83;MQ0=0;MQRankSum=-4.082;QD=36.50;ReadPosRankSum=-0.357;VQSLOD=1.7268;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1422	0/0:8,0:8:23.85:0,24,225	0/0:31,0:28:78.13:0,78,1035	0/0:23,0:23:44.33:0,44,691	0/0:42,0:42:99:0,126,1693	0/0:28,0:28:84.28:0,84,1168	1/1:10,27:37:93.43:1458,93,0	0/0:34,0:34:81.70:0,82,1034	0/0:23,0:23:69.23:0,69,950	0/0:15,0:15:41.95:0,42,465	0/0:14,0:14:40.51:0,41,329	1/1:2,26:28:70.21:1085,70,0	1/1:3,27:30:53.48:870,53,0	1/1:5,12:17:48.61:675,49,0	0/0:28,0:28:78.23:0,78,943	0/0:39,0:39:99:0,101,1271	0/0:18,0:18:36.40:0,36,260	0/0:17,0:17:42.23:0,42,534	0/0:20,0:20:53.17:0,53,689	0/0:14,0:14:39.11:0,39,477	0/0:27,0:27:64.74:0,65,809	0/0:32,0:32:96.31:0,96,1316	0/0:20,0:20:60.18:0,60,800	0/0:21,0:21:60.20:0,60,838	0/0:25,0:25:72.24:0,72,1000	0/0:23,0:23:65.24:0,65,849	0/0:37,0:37:95.16:0,95,1154	0/0:7,0:7:21.06:0,21,248
chr10	85331152	.	TGTGC	T	1657.39	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=5.797;DP=666;FS=2.008;HRun=0;HaplotypeScore=139.5113;InbreedingCoeff=0.4351;MQ=66.25;MQ0=9;MQRankSum=0.299;QD=8.05;ReadPosRankSum=-0.489;VQSLOD=2.7937;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:41.52:0,42,359	0/1:7,0:7:5.12:61,0,5	0/0:37,0:21:12.29:0,12,187	0/0:35,0:24:47.81:0,48,433	0/0:24,0:24:50.71:0,51,544	0/0:20,0:20:50.92:0,51,711	1/1:16,7:23:44:383,44,0	0/0:21,0:20:40.07:0,40,312	0/0:27,0:26:39.33:0,39,569	0/1:26,0:26:67.42:284,0,67	0/1:13,0:13:30.11:80,0,30	1/1:32,1:33:40.53:461,41,0	1/1:16,1:17:35.81:331,36,0	1/1:13,0:13:7.27:80,7,0	0/0:22,0:22:26.17:0,26,239	0/0:17,0:17:32.91:0,33,430	0/1:29,0:29:99:130,0,203	0/0:20,0:20:14.58:0,15,163	0/1:22,0:20:8.63:9,0,248	0/0:21,0:21:41.66:0,42,350	0/0:62,0:59:53.49:0,53,830	0/0:20,0:20:36:0,36,551	0/0:16,0:16:38.91:0,39,522	0/0:37,0:37:23.83:0,24,966	0/0:16,0:15:35.85:0,36,370	0/1:23,0:23:13.73:14,0,331	0/0:18,0:18:20:0,20,313	0/0:12,0:12:9.70:0,10,181
chr10	85331160	.	C	CTTGCGTGTGT	773.87	PASS	AB=0.946;AC=10;AF=0.179;AN=56;BaseQRankSum=0.562;DP=650;FS=1.725;HRun=0;HaplotypeScore=215.3503;InbreedingCoeff=0.0683;MQ=60.44;MQ0=12;MQRankSum=-2.231;QD=3.70;ReadPosRankSum=-3.191;VQSLOD=2.1874;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:36.92:0,37,546	0/1:9,0:9:17.91:18,0,116	0/0:32,0:16:44.50:0,45,439	0/0:29,0:18:51.04:0,51,667	0/0:22,0:22:51.11:0,51,808	0/0:19,0:19:54.15:0,54,1052	0/0:28,0:29:41.45:0,41,636	1/1:19,0:18:22.49:179,22,0	0/0:27,0:26:72.34:0,72,1211	0/0:24,0:24:36.41:0,36,709	0/0:11,0:11:20.95:0,21,236	0/0:33,0:33:51.11:0,51,1211	0/0:20,0:20:6.01:0,6,582	0/0:13,0:13:9.03:0,9,256	0/0:21,0:21:32.95:0,33,416	0/0:15,0:17:29.76:0,30,467	0/0:27,0:27:64:0,64,790	0/1:6,12:24:3.74:133,0,4	0/1:20,0:18:70.97:71,0,107	0/1:18,0:17:90.65:91,0,197	0/1:65,0:60:99:127,0,482	0/0:17,0:16:44.97:0,45,797	0/0:16,0:15:38.80:0,39,611	0/0:37,0:37:56.62:0,57,1797	0/0:15,0:14:38.64:0,39,588	0/1:23,0:23:60.75:191,0,61	0/1:19,0:19:78.92:79,0,135	0/1:12,0:12:22.47:35,0,22
chr10	85331162	.	TGC	T	2070.50	PASS	AB=0.994;AC=18;AF=0.321;AN=56;BaseQRankSum=9.706;DP=644;FS=9.374;HRun=0;HaplotypeScore=115.5072;InbreedingCoeff=0.5134;MQ=57.00;MQ0=13;MQRankSum=2.461;QD=6.86;ReadPosRankSum=0.764;VQSLOD=2.7156;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:5.05:0,5,253	1/1:10,0:10:15.98:96,16,0	0/0:29,0:13:12.30:0,12,187	0/0:28,0:17:47.81:0,48,433	0/0:21,0:21:50.69:0,51,448	0/0:20,0:20:50.89:0,51,559	0/1:28,1:29:26.78:262,0,27	0/0:21,0:20:23.56:0,24,292	0/0:26,1:26:11.76:0,12,462	1/1:24,0:24:48.79:401,49,0	0/1:10,0:10:0.89:83,0,1	1/1:4,27:31:26.65:627,27,0	1/1:16,3:19:41.13:391,41,0	1/1:1,13:14:9.03:137,9,0	0/0:21,0:21:26.02:0,26,184	0/1:18,0:18:11.03:11,0,289	1/1:28,0:28:10.52:232,11,0	0/0:23,0:23:12.84:0,13,129	0/0:20,0:18:37.41:0,37,297	0/0:17,0:16:2.88:0,3,242	0/1:65,0:60:7.95:8,0,568	0/0:16,0:15:35.97:0,36,419	0/0:17,0:15:38.90:0,39,404	0/1:35,0:35:4.41:4,0,860	0/0:16,0:15:21.73:0,22,319	0/0:22,0:22:8.04:0,8,331	0/1:19,0:19:0.85:1,0,263	0/0:12,0:12:3.89:0,4,147
chr10	85331164	.	CGT	C	1002.14	PASS	AB=0.904;AC=20;AF=0.385;AN=52;BaseQRankSum=2.599;DP=645;FS=1.373;HRun=0;HaplotypeScore=120.2615;InbreedingCoeff=0.3236;MQ=55.84;MQ0=15;MQRankSum=1.353;QD=2.96;ReadPosRankSum=1.822;VQSLOD=2.4941;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:31:9.40:9,0,20	0/0:10,0:10:6.74:0,7,38	./.	./.	0/0:21,0:21:6.02:0,6,90	0/0:19,0:19:15.05:0,15,225	0/0:29,0:29:2.95:0,3,63	0/0:19,0:18:1.55:0,2,4	0/1:25,2:26:72.07:79,0,72	0/0:22,0:22:21.58:0,22,150	0/0:9,0:9:6.01:0,6,67	1/1:30,0:30:27.08:282,27,0	1/1:21,0:21:7.20:73,7,0	0/1:15,0:15:1.35:50,0,1	0/0:14,0:22:3.01:0,3,34	0/0:17,0:18:17.99:0,18,183	0/0:28,0:28:34.79:0,35,271	0/0:24,0:23:11.96:0,12,110	1/1:20,0:19:5.68:28,6,0	0/1:10,5:15:32.94:87,0,33	1/1:47,20:64:5.24:321,5,0	0/0:15,0:14:12.04:0,12,180	0/0:16,0:14:9.01:0,9,132	0/1:30,5:35:42.80:43,0,621	0/1:15,3:17:14.94:15,0,144	1/1:18,3:22:5.81:46,6,0	1/1:15,3:19:11.86:113,12,0	1/1:12,0:12:2.99:23,3,0
chr10	85331196	.	T	TTAA	613.79	PASS	AB=0.633;AC=9;AF=0.161;AN=56;BaseQRankSum=9.837;DP=595;FS=20.780;HRun=0;HaplotypeScore=123.0023;InbreedingCoeff=0.0767;MQ=55.64;MQ0=15;MQRankSum=3.544;QD=3.57;ReadPosRankSum=3.140;VQSLOD=0.5968;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:42.13:0,42,713	0/1:3,0:10:36.26:36,0,47	0/0:22,0:8:20.93:0,21,277	0/0:14,0:4:8.86:0,9,123	0/0:22,0:22:51.17:0,51,942	0/0:18,0:17:51.17:0,51,944	0/1:15,0:37:22.27:22,0,56	0/0:27,0:26:78.23:0,78,1379	0/0:21,0:20:48.15:0,48,788	0/1:6,0:21:99:118,0,137	0/1:3,1:12:50.79:116,0,51	1/1:27,0:28:12.61:172,13,0	0/1:5,0:20:44.34:54,0,44	0/1:17,0:18:9.11:93,0,9	0/0:19,0:19:18.06:0,18,302	0/0:17,0:17:39.12:0,39,664	0/1:4,0:26:99:147,0,131	0/0:19,0:18:23.89:0,24,370	0/0:18,0:17:46.36:0,46,700	0/0:17,0:16:36.10:0,36,557	0/0:66,0:62:99:0,132,2098	0/0:14,0:13:30.10:0,30,550	0/0:11,0:9:21.07:0,21,390	0/0:34,0:34:84.27:0,84,1459	0/0:14,0:13:30.09:0,30,495	0/0:16,0:16:29.29:0,29,633	0/0:16,0:16:42.13:0,42,654	0/0:9,0:9:15.03:0,15,233
chr10	85331779	.	T	TA	1757.04	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-9.849;DP=696;FS=2.369;HRun=8;HaplotypeScore=83.1030;InbreedingCoeff=0.7835;MQ=80.61;MQ0=0;MQRankSum=-0.761;QD=19.74;ReadPosRankSum=0.160;VQSLOD=3.4149;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,123,1120	0/0:13,0:13:5.18:0,5,10	0/0:25,0:25:39:0,39,356	0/0:14,0:15:11.58:0,12,237	0/0:15,0:15:42.02:0,42,384	0/0:15,0:15:45.02:0,45,412	0/0:34,0:34:92.98:0,93,828	0/0:26,0:26:72.04:0,72,658	0/0:25,1:26:37.42:0,37,597	0/0:33,0:34:14.55:0,15,28	0/1:23,0:23:6.38:7,0,6	0/0:26,0:26:66.02:0,66,604	0/0:26,0:26:63.02:0,63,576	0/0:24,0:24:63.03:0,63,576	1/1:4,30:34:65.81:1011,66,0	1/1:6,26:32:75.22:865,75,0	0/0:32,0:32:11.09:0,11,22	0/0:30,0:30:75.03:0,75,686	0/0:22,0:22:60.02:0,60,545	0/0:20,0:20:54.03:0,54,494	0/0:28,0:28:78.04:0,78,714	0/0:18,0:18:48.02:0,48,439	0/0:25,0:25:66.03:0,66,604	0/0:25,0:24:63.02:0,63,576	0/0:14,0:14:36.02:0,36,329	0/0:29,0:29:75.40:0,75,682	0/0:31,0:31:72.03:0,72,659	0/0:8,0:8:24.01:0,24,220
chr10	85331787	.	AC	A	3727.46	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.912;DP=698;FS=10.923;HRun=1;HaplotypeScore=75.2402;InbreedingCoeff=0.9991;MQ=81.12;MQ0=0;MQRankSum=0.219;QD=34.84;ReadPosRankSum=0.215;VQSLOD=2.6965;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,1831	1/1:0,14:14:33.10:460,33,0	0/0:23,0:23:63.13:0,63,783	0/0:17,0:17:35.14:0,35,480	0/0:19,0:19:56.93:0,57,712	0/0:15,0:15:45.15:0,45,624	0/0:33,0:33:99:0,99,1272	0/0:30,0:30:90.17:0,90,1115	0/0:25,0:25:75.15:0,75,989	1/1:1,34:35:99:1312,102,0	1/1:0,23:23:69:849,69,0	0/0:24,0:24:72.23:0,72,983	0/0:26,0:26:75.18:0,75,988	0/0:25,0:25:72.20:0,72,952	0/0:33,0:33:96.74:0,97,607	0/0:28,0:28:76.04:0,76,452	1/1:0,35:35:81.24:1107,81,0	0/0:30,0:30:81.20:0,81,1084	0/0:24,0:24:72.07:0,72,896	0/0:19,0:19:57.18:0,57,774	0/0:28,0:28:84.21:0,84,1098	0/0:19,0:19:57.16:0,57,757	0/0:24,0:24:72.21:0,72,967	0/0:24,0:23:69.16:0,69,936	0/0:12,0:12:36.12:0,36,498	0/0:29,2:31:23.71:0,24,1066	0/0:27,0:27:81.21:0,81,1073	0/0:10,0:10:30.02:0,30,376
chr10	85332696	.	GA	G	4940.15	PASS	AB=0.964;AC=25;AF=0.446;AN=56;BaseQRankSum=4.598;DP=660;FS=7.030;HRun=11;HaplotypeScore=85.0669;InbreedingCoeff=0.9392;MQ=74.92;MQ0=0;MQRankSum=-0.633;QD=17.46;ReadPosRankSum=-0.577;VQSLOD=5.3436;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:54:73.78:0,74,383	1/1:3,7:10:20.97:172,21,0	0/0:24,0:24:36.46:0,36,365	0/1:26,1:22:5.48:5,0,283	0/0:24,1:25:38.45:0,38,579	0/0:18,0:18:48.12:0,48,512	0/0:26,2:30:16.70:0,17,560	1/1:9,24:33:65.71:531,66,0	0/0:18,0:20:41.92:0,42,421	1/1:4,14:18:43.15:340,43,0	1/1:3,10:13:29.95:245,30,0	0/0:3,0:18:34.22:0,34,180	0/0:4,0:24:48.56:0,49,261	0/0:10,0:18:27.81:0,28,213	0/0:18,0:18:41.78:0,42,427	0/0:27,1:27:38.51:0,39,615	1/1:3,25:28:65.91:541,66,0	1/1:4,28:32:80.90:665,81,0	1/1:4,21:25:65.84:533,66,0	1/1:2,19:23:54.98:429,55,0	1/1:2,15:17:41.94:345,42,0	0/0:19,2:21:26.48:0,26,480	0/0:17,0:17:36.07:0,36,371	0/0:34,0:35:87.03:0,87,901	0/0:23,3:25:16.31:0,16,566	1/1:4,27:31:77.89:640,78,0	1/1:4,10:14:26.96:222,27,0	1/1:0,12:12:32.96:271,33,0
chr10	85333613	.	ATCATCGTCGTCGTCGTCGTCGTCG	A	17816.58	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=11.123;DP=600;FS=13.586;HRun=0;HaplotypeScore=336.1163;InbreedingCoeff=0.9496;MQ=75.30;MQ0=2;MQRankSum=-6.146;QD=56.03;ReadPosRankSum=2.934;VQSLOD=2.6725;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,6528	1/1:0,7:7:13.29:792,13,0	0/0:30,0:25:62.27:0,62,1382	0/0:27,0:22:56.24:0,56,1244	0/0:17,0:17:51.04:0,51,2068	0/0:15,0:15:42.09:0,42,2810	1/1:0,17:17:15.05:984,15,0	1/1:15,10:25:66:794,66,0	0/0:19,0:19:50.69:0,51,2781	1/1:2,30:32:74.67:2303,75,0	1/1:0,17:17:27.09:1769,27,0	1/1:1,19:20:18.06:1180,18,0	1/1:1,22:24:17.95:1160,18,0	1/1:1,25:26:17.85:1180,18,0	0/0:17,0:17:43:0,43,1725	0/0:21,0:21:57.14:0,57,2016	1/1:0,17:17:8.77:560,9,0	0/0:18,0:18:26.90:0,27,317	1/1:2,18:19:53.60:818,54,0	1/1:0,27:27:18.06:1176,18,0	1/1:3,23:26:3.01:196,3,0	0/0:26,0:26:57.12:0,57,2939	0/0:11,0:11:33.07:0,33,1930	0/0:29,0:29:87.16:0,87,6503	0/0:12,0:12:33.01:0,33,1431	1/1:3,18:21:48.76:1357,49,0	1/1:0,30:30:44.94:2956,45,0	1/1:0,9:9:9.03:592,9,0
chr10	85333616	.	ATCGTCGTCG	A	6775.15	PASS	AC=34;AF=0.630;AN=54;BaseQRankSum=10.979;DP=586;FS=11.509;HRun=0;HaplotypeScore=229.5523;InbreedingCoeff=0.8736;MQ=72.82;MQ0=4;MQRankSum=-10.988;QD=20.04;ReadPosRankSum=2.363;VQSLOD=2.2919;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:51.18:0,51,2248	1/1:7,0:7:12.04:252,12,0	0/0:27,0:21:4.56:0,5,32	0/0:28,0:22:8.99:0,9,78	0/0:17,0:17:15.03:0,15,472	0/0:16,0:16:24.08:0,24,1053	1/1:17,0:17:15.05:314,15,0	./.	0/0:22,0:22:27.09:0,27,1094	1/1:30,0:30:27.09:565,27,0	1/1:17,0:17:27.09:566,27,0	1/1:19,0:19:18.06:377,18,0	1/1:23,0:23:18.06:377,18,0	1/1:25,0:25:18.06:377,18,0	1/1:5,12:17:29.43:825,29,0	1/1:9,12:21:30.10:826,30,0	1/1:17,0:17:9.03:157,9,0	1/1:9,0:17:6.02:126,6,0	1/1:19,0:18:6.02:126,6,0	1/1:27,0:27:18.06:377,18,0	1/1:25,0:24:3.01:63,3,0	0/0:17,0:26:27.08:0,27,460	0/0:10,0:10:15.03:0,15,500	0/0:29,0:29:54.17:0,54,2259	0/0:11,0:11:15.03:0,15,538	1/1:18,0:18:15.05:314,15,0	1/1:30,0:30:45.15:943,45,0	1/1:9,0:9:9.03:188,9,0
chr10	85333994	.	CATACAGATATATATATATATATATATATATATATATATATAT	C	1255.16	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=2.654;DP=173;FS=22.785;HRun=0;HaplotypeScore=147.7673;InbreedingCoeff=0.4813;MQ=101.70;MQ0=3;MQRankSum=-1.961;QD=33.03;ReadPosRankSum=1.878;VQSLOD=1.3206;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:15.05:0,15,832	1/1:2,0:4:6.02:599,6,0	0/0:14,0:10:18.04:0,18,260	0/0:22,0:14:24.55:0,25,421	0/0:3,0:3:6.02:0,6,121	0/0:4,0:4:12.04:0,12,256	0/0:5,0:5:6.96:0,7,130	0/0:13,0:13:19.75:0,20,595	0/0:2,0:2:6:0,6,72	1/1:3,0:3:6.02:98,6,0	1/1:1,11:12:5.96:358,6,0	0/1:4,0:4:0:0,0,0	0/0:3,0:3:4.24:0,4,28	0/0:4,0:4:0.47:0,0,1	0/0:1,0:1:3.01:0,3,50	0/0:5,0:5:12.04:0,12,264	1/1:0,15:15:3.01:322,3,0	0/0:15,0:15:39.13:0,39,2164	0/0:6,0:5:5.03:0,5,31	0/0:6,0:6:3:0,3,25	./.	0/0:6,0:6:12.04:0,12,200	0/0:4,0:4:9.03:0,9,217	0/0:2,0:2:3.01:0,3,48	0/0:5,0:5:9.03:0,9,238	0/0:1,0:1:3:0,3,28	0/0:5,0:5:2.66:0,3,8	0/0:4,0:4:6.02:0,6,664
chr10	85334536	.	A	AAAAAAAAAAAAG	3104.85	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-1.716;DP=484;FS=40.034;HRun=0;HaplotypeScore=178.5396;InbreedingCoeff=0.3897;MQ=44.87;MQ0=27;MQRankSum=-6.928;QD=15.00;ReadPosRankSum=3.222;VQSLOD=1.5631;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:30:24.81:193,25,0	0/0:5,0:5:4.57:0,5,85	0/0:35,0:5:8.53:0,9,67	0/0:28,0:10:11.47:0,11,131	0/1:24,0:23:20.70:21,0,253	0/1:18,0:18:18.50:18,0,191	0/1:25,0:24:45.95:46,0,81	0/0:19,0:19:13.66:0,14,87	0/0:11,0:10:3.64:0,4,117	0/0:14,0:12:13.78:0,14,242	0/0:9,0:6:5.93:0,6,163	0/1:15,0:15:23.53:105,0,24	1/1:23,0:23:17.48:149,17,0	0/0:15,0:15:7.23:0,7,51	1/1:7,8:18:8.95:344,9,0	1/1:16,0:16:33.51:1191,34,0	0/0:26,0:23:13.61:0,14,576	1/1:15,0:13:21.60:1201,22,0	0/0:17,0:17:14.18:0,14,86	0/0:12,0:12:12.04:0,12,324	1/1:7,0:6:0.89:2,1,0	0/0:13,0:13:1.34:0,1,133	0/1:15,0:15:10.76:11,0,101	0/0:18,0:18:21.99:0,22,283	0/0:20,0:20:40.60:0,41,414	0/0:7,0:6:7.79:0,8,117	0/0:15,0:14:7.38:0,7,165	0/0:13,0:12:15.44:0,15,332
chr10	85334538	.	A	AAAG	409.24	PASS	AB=0.856;AC=7;AF=0.125;AN=56;BaseQRankSum=1.127;DP=485;FS=5.638;HRun=0;HaplotypeScore=115.1698;InbreedingCoeff=0.3657;MQ=46.62;MQ0=27;MQRankSum=-3.775;QD=4.13;ReadPosRankSum=2.752;VQSLOD=1.7010;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:15.05:0,15,151	0/0:4,0:4:4.56:0,5,31	0/0:36,0:6:9.34:0,9,72	0/0:28,0:10:5.73:0,6,64	0/0:24,0:23:50.04:0,50,353	0/0:19,0:19:37.16:0,37,322	1/1:7,0:23:13.76:198,14,0	0/0:19,0:19:25.96:0,26,149	0/0:9,0:8:22.48:0,22,180	0/0:12,0:10:15.17:0,15,104	0/0:11,0:8:8.20:0,8,56	0/1:16,0:16:7.51:168,0,8	1/1:10,12:24:2.10:78,2,0	0/1:4,11:17:17.99:77,0,18	0/1:18,0:17:16.33:16,0,34	0/0:16,0:16:16.44:0,16,153	0/0:25,0:22:13.63:0,14,174	0/0:15,0:13:19.30:0,19,213	0/0:16,0:16:20.67:0,21,137	0/0:11,0:11:13.26:0,13,116	0/0:8,0:7:1.55:0,2,4	0/0:13,0:13:37.63:0,38,295	0/0:18,0:18:39.32:0,39,299	0/0:18,0:18:40.49:0,40,313	0/0:20,0:20:59.65:0,60,491	0/0:9,0:8:17.28:0,17,123	0/0:14,0:13:11.88:0,12,100	0/0:11,0:10:26.19:0,26,212
chr10	85334545	.	GAAAAAAGAAA	G	5005.02	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=8.644;DP=466;FS=19.276;HRun=0;HaplotypeScore=120.6681;InbreedingCoeff=0.9657;MQ=51.91;MQ0=22;MQRankSum=-4.252;QD=43.52;ReadPosRankSum=-1.044;VQSLOD=3.1585;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:44.31:0,44,724	1/1:1,1:2:6.02:137,6,0	0/0:36,0:6:10.42:0,10,251	0/0:31,0:13:30.99:0,31,497	0/0:20,0:20:48.10:0,48,1341	0/0:15,0:15:45.10:0,45,1148	0/0:24,0:23:33:0,33,1028	1/1:16,0:16:33.02:525,33,0	0/0:11,0:11:30.10:0,30,932	1/1:7,5:10:27.07:650,27,0	1/1:9,2:9:20.09:411,20,0	0/0:17,0:17:48.10:0,48,1049	0/0:23,0:23:25.08:0,25,653	0/0:16,0:16:12.04:0,12,394	0/0:16,0:17:15.05:0,15,502	0/0:17,0:18:39.59:0,40,1336	1/1:18,5:21:41.97:745,42,0	0/0:17,0:15:45.15:0,45,1564	1/1:10,0:10:27.04:480,27,0	1/1:4,0:8:24.08:572,24,0	./.	0/0:16,0:16:45.13:0,45,1058	0/0:18,0:18:42.09:0,42,1102	0/0:17,0:17:36.12:0,36,1613	0/0:19,0:19:57.19:0,57,2031	1/1:11,0:10:27.09:519,27,0	1/1:7,0:8:15.05:318,15,0	1/1:9,0:13:27.09:646,27,0
chr10	85334552	.	GA	G	1486.33	PASS	AB=0.684;AC=19;AF=0.352;AN=54;BaseQRankSum=9.819;DP=470;FS=6.367;HRun=6;HaplotypeScore=81.1925;InbreedingCoeff=0.8301;MQ=58.93;MQ0=19;MQRankSum=-6.141;QD=12.60;ReadPosRankSum=2.383;VQSLOD=2.2944;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:23.47:0,23,217	1/1:1,0:3:2.92:8,3,0	0/0:39,0:9:20.03:0,20,231	0/0:36,0:18:10.11:0,10,352	0/0:21,0:21:39.07:0,39,505	0/0:13,0:13:27.09:0,27,377	0/0:22,0:21:26.88:0,27,328	1/1:1,15:16:36.11:416,36,0	0/0:12,0:12:27.98:0,28,379	0/1:7,0:11:6.79:15,0,7	1/1:3,0:11:4.13:14,4,0	0/0:16,0:16:33:0,33,352	0/0:25,0:25:25.67:0,26,268	0/0:16,0:16:8.98:0,9,103	0/0:20,0:20:24.03:0,24,310	0/0:18,0:18:39.82:0,40,495	1/1:7,0:23:5.04:13,5,0	0/0:17,0:16:45.08:0,45,584	1/1:0,9:9:27.08:308,27,0	1/1:0,4:8:24:229,24,0	./.	0/0:15,0:15:33.10:0,33,446	0/0:17,0:17:39.58:0,40,512	0/0:16,0:16:36.12:0,36,503	0/0:17,0:17:45.15:0,45,630	1/1:3,8:10:7.20:260,7,0	1/1:1,6:8:14.89:143,15,0	1/1:0,9:13:27.02:273,27,0
chr10	85335389	.	GA	G	781.37	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.970;DP=581;FS=8.483;HRun=1;HaplotypeScore=124.4246;InbreedingCoeff=0.8899;MQ=75.40;MQ0=1;MQRankSum=-3.679;QD=5.39;ReadPosRankSum=-1.261;VQSLOD=-0.4989;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1908	0/0:12,0:12:31.37:0,31,238	0/0:28,0:26:69.67:0,70,1018	0/0:26,3:18:8.16:0,8,437	0/0:24,0:24:69.22:0,69,1063	0/0:26,0:26:78.15:0,78,1132	0/0:25,0:25:49.35:0,49,379	1/1:33,4:34:29.71:289,30,0	0/0:17,0:17:51.16:0,51,766	0/0:26,0:26:64.75:0,65,453	0/0:13,0:13:26.39:0,26,186	0/0:12,0:12:5.91:0,6,39	0/0:18,0:18:50.14:0,50,350	0/0:17,0:17:39.54:0,40,283	0/0:27,0:27:81.23:0,81,1203	0/0:17,0:17:51.17:0,51,792	0/0:20,0:20:45.86:0,46,315	0/0:16,0:16:42.12:0,42,638	1/1:24,0:23:33.61:162,34,0	1/1:16,1:17:12.30:107,12,0	1/1:13,0:13:14.20:76,14,0	0/0:20,0:20:60.20:0,60,955	0/0:12,0:12:36.12:0,36,553	0/0:22,0:22:60.66:0,61,908	0/0:15,0:15:45.15:0,45,717	1/1:24,2:26:8.75:225,9,0	1/1:14,1:15:6.10:78,6,0	1/1:13,0:13:2.07:25,2,0
chr10	85335401	.	CTT	C	4173.15	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=13.835;DP=592;FS=2.095;HRun=4;HaplotypeScore=121.5086;InbreedingCoeff=0.9445;MQ=67.46;MQ0=13;MQRankSum=-2.874;QD=15.40;ReadPosRankSum=2.672;VQSLOD=0.5543;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,927	1/1:11,0:11:23.91:190,24,0	0/0:26,0:22:39.51:0,40,490	0/0:29,0:18:12.83:0,13,204	0/0:25,0:25:64.28:0,64,568	0/0:26,0:26:74.77:0,75,655	1/1:23,0:23:53.81:447,54,0	1/1:33,0:30:61.84:486,62,0	0/0:20,0:18:53.29:0,53,454	1/1:3,20:23:50.53:391,51,0	1/1:2,9:11:2.72:18,3,0	0/0:14,0:13:0:0,0,0	1/1:21,0:18:42.56:318,43,0	1/1:20,0:19:38.43:303,38,0	0/0:28,0:28:77.42:0,77,623	0/0:25,0:24:60.68:0,61,486	1/1:20,0:19:44.73:345,45,0	0/0:20,0:19:39.51:0,40,329	1/1:6,17:21:56.43:382,56,0	1/1:17,0:16:21.29:157,21,0	1/1:13,0:12:14.87:125,15,0	0/0:22,0:22:59.48:0,59,520	0/0:13,0:13:31.75:0,32,246	0/0:22,0:22:44.88:0,45,407	0/0:13,0:13:39.03:0,39,357	1/1:23,1:24:68.61:547,69,0	1/1:15,0:15:32.79:248,33,0	1/1:16,0:13:32.46:218,32,0
chr10	85335402	.	TTTTC	T	4200.40	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=14.310;DP=584;FS=1.171;HRun=0;HaplotypeScore=138.3848;InbreedingCoeff=0.9430;MQ=66.72;MQ0=13;MQRankSum=-4.043;QD=16.03;ReadPosRankSum=2.816;VQSLOD=3.0166;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,951	1/1:11,0:11:23.91:190,24,0	0/0:26,0:22:39.51:0,40,490	0/0:28,0:17:11.79:0,12,198	0/0:27,0:27:64.28:0,64,569	0/0:26,0:26:74.77:0,75,655	1/1:21,0:22:53.81:447,54,0	1/1:32,0:29:61.84:486,62,0	0/0:21,0:19:53.29:0,53,455	1/1:22,0:23:50.33:405,50,0	1/1:11,0:11:2.79:18,3,0	0/0:2,13:14:0:0,0,0	1/1:21,0:18:42.14:317,42,0	1/1:19,0:18:38.46:303,38,0	0/0:29,0:29:23.61:0,24,538	0/0:25,0:24:36.75:0,37,455	1/1:18,0:17:44.73:345,45,0	0/0:19,0:18:45.30:0,45,410	1/1:21,0:20:56.43:382,56,0	1/1:16,0:15:21.71:157,22,0	1/1:12,0:11:14.73:124,15,0	0/0:21,0:21:59.64:0,60,531	0/0:13,0:13:32.19:0,32,258	0/0:20,0:20:44.98:0,45,501	0/0:14,0:14:39.03:0,39,357	1/1:24,0:24:68.61:547,69,0	1/1:14,0:15:32.80:262,33,0	1/1:17,0:13:32.46:218,32,0
chr10	85335404	.	TTCTC	T	153.20	PASS	AC=10;AF=0.263;AN=38;BaseQRankSum=2.218;DP=611;FS=1.740;HRun=0;HaplotypeScore=153.3808;InbreedingCoeff=0.4202;MQ=65.19;MQ0=17;MQRankSum=-1.399;QD=1.32;ReadPosRankSum=1.263;VQSLOD=2.7938;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:3:0,3,25	./.	./.	0/0:28,0:17:0:0,0,0	./.	0/0:28,0:28:3.01:0,3,59	1/1:23,0:22:1.55:4,2,0	0/0:35,0:32:1.25:0,1,3	0/0:22,0:20:0.47:0,0,1	1/1:22,0:22:2.59:29,3,0	./.	0/0:18,0:17:0.47:0,0,1	0/0:23,0:20:0:0,0,0	0/0:19,0:18:0:0,0,0	1/1:27,1:29:11.76:147,12,0	1/1:23,3:25:2.80:45,3,0	./.	0/0:18,0:18:9.24:0,9,91	0/0:24,0:23:0:0,0,0	./.	0/0:12,0:10:0:0,0,0	0/0:25,0:24:3.01:0,3,47	0/0:15,0:15:6.02:0,6,103	0/0:18,0:18:12.03:0,12,215	./.	./.	1/1:15,0:15:3:28,3,0	./.
chr10	85336286	.	T	TTACGTTTGGAATC	33557.01	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-7.493;DP=708;FS=4.625;HRun=0;HaplotypeScore=225.1524;InbreedingCoeff=0.9944;MQ=85.34;MQ0=0;MQRankSum=-16.168;QD=121.14;ReadPosRankSum=-1.471;VQSLOD=4.1006;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:93.32:0,93,3576	1/1:2,6:9:21.07:1368,21,0	0/0:34,0:34:87.20:0,87,2389	0/0:18,0:18:41.81:0,42,1425	0/0:22,0:22:60.19:0,60,2226	0/0:20,0:20:54.15:0,54,1816	0/0:33,0:33:93.28:0,93,3295	1/1:28,3:47:99:5980,126,0	0/0:23,0:23:66.21:0,66,2356	1/1:10,12:32:87.46:4477,87,0	1/1:2,11:21:39.13:2355,39,0	0/0:28,0:28:84.27:0,84,3128	0/0:28,0:28:84.25:0,84,2963	0/0:25,0:25:72.24:0,72,2617	0/0:31,0:31:90.30:0,90,3399	0/0:29,0:29:78.27:0,78,3059	1/1:6,5:17:21.07:1237,21,0	0/0:19,0:18:57.13:0,57,1835	1/1:9,8:27:75.24:3392,75,0	1/1:9,12:27:62.94:3612,63,0	1/1:10,5:25:33.11:1874,33,0	0/0:16,0:16:42.13:0,42,1579	0/0:16,0:16:45.15:0,45,1792	0/0:33,0:33:96.30:0,96,3643	0/0:20,0:20:54.16:0,54,1969	1/1:9,12:26:69.24:4287,69,0	1/1:7,23:38:69.24:4530,69,0	1/1:6,1:7:12.04:445,12,0
chr10	85336590	.	TCACA	T	1623.54	PASS	AB=0.871;AC=22;AF=0.440;AN=50;BaseQRankSum=5.507;DP=491;FS=22.034;HRun=0;HaplotypeScore=87.4012;InbreedingCoeff=0.5513;MQ=70.69;MQ0=7;MQRankSum=0.230;QD=6.85;ReadPosRankSum=-0.322;VQSLOD=0.5739;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:33:0.35:0,0,111	1/1:9,3:11:5.98:67,6,0	./.	./.	0/1:12,1:13:31.63:32,0,221	0/0:13,0:13:9.03:0,9,130	1/1:14,12:26:30.10:448,30,0	./.	0/0:11,0:11:12.04:0,12,253	0/1:11,3:14:15.45:121,0,15	1/1:8,2:10:6.49:94,6,0	1/1:13,8:23:26.44:363,26,0	1/1:14,4:17:5.81:93,6,0	1/1:8,5:13:3.01:47,3,0	1/1:9,0:17:17.05:145,17,0	1/1:13,0:21:10.83:88,11,0	1/1:11,7:18:18.06:280,18,0	0/0:17,0:20:31.91:0,32,526	0/0:12,0:12:9.02:0,9,140	0/0:16,0:16:12.02:0,12,192	0/0:19,0:18:9.03:0,9,184	0/0:19,0:19:27.07:0,27,451	0/1:17,1:18:25.65:26,0,368	0/0:29,1:31:4.15:0,4,852	0/0:10,0:10:6.02:0,6,109	0/0:26,0:25:33.04:0,33,605	0/0:11,0:13:23.82:0,24,390	0/0:5,0:5:15.03:0,15,306
chr10	85337414	.	T	TC	5743.53	PASS	AB=0.526;AC=21;AF=0.375;AN=56;BaseQRankSum=5.626;DP=478;FS=8.945;HRun=6;HaplotypeScore=56.8502;InbreedingCoeff=0.9570;MQ=79.15;MQ0=0;MQRankSum=0.068;QD=30.55;ReadPosRankSum=-0.133;VQSLOD=5.0314;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:78.15:0,78,787	1/1:0,8:8:24.08:302,24,0	0/0:16,0:16:42.04:0,42,416	0/0:16,0:16:13.99:0,14,260	0/0:13,0:13:33.07:0,33,337	0/0:13,0:13:39.08:0,39,391	0/0:24,0:24:66.15:0,66,673	1/1:6,15:20:33.10:413,33,0	0/0:11,0:11:30.07:0,30,306	1/1:3,16:19:51.16:635,51,0	1/1:1,14:15:39.12:490,39,0	0/0:20,0:20:57.13:0,57,580	0/0:11,0:11:24.05:0,24,242	0/0:9,0:9:24.05:0,24,245	0/0:14,0:14:39.08:0,39,397	0/0:14,0:14:36.08:0,36,367	1/1:2,22:24:57.18:717,57,0	0/0:23,0:23:66.15:0,66,673	0/1:1,9:10:0.15:275,0,0	1/1:0,20:20:57.10:677,57,0	1/1:1,27:28:69.22:868,69,0	0/0:17,0:17:42.09:0,42,428	0/0:21,0:21:60.13:0,60,612	0/0:21,0:21:54.12:0,54,551	0/0:14,0:14:39.09:0,39,398	1/1:2,15:17:45.11:536,45,0	1/1:1,17:18:45.14:566,45,0	1/1:0,8:8:21.07:264,21,0
chr10	85337535	.	T	TA	1259.99	PASS	AB=0.833;AC=30;AF=0.536;AN=56;BaseQRankSum=6.488;DP=544;FS=4.848;HRun=17;HaplotypeScore=115.4518;InbreedingCoeff=0.4354;MQ=83.56;MQ0=8;MQRankSum=-6.873;QD=2.97;ReadPosRankSum=-3.234;VQSLOD=-0.5266;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:28:42.21:0,42,205	0/0:7,0:9:12.85:0,13,66	0/1:49,0:27:3.52:4,0,36	0/1:58,0:31:7.80:30,0,8	0/0:9,0:12:14.49:0,14,63	0/1:12,2:16:22.14:22,0,54	1/1:17,0:16:22.84:116,23,0	1/1:39,0:35:37.19:193,37,0	0/0:12,0:13:8.45:0,8,49	0/1:22,0:24:6.88:7,0,120	0/0:14,0:18:20.31:0,20,94	1/1:15,0:15:15.48:75,15,0	1/1:14,0:14:20.02:102,20,0	1/1:14,0:13:11.32:56,11,0	0/1:4,11:18:10.96:102,0,11	0/1:9,10:20:29.41:118,0,29	0/1:21,1:24:5.21:5,0,110	0/1:6,13:20:0.49:126,0,0	1/1:15,0:15:20.02:107,20,0	1/1:16,0:16:17.04:86,17,0	1/1:5,0:5:0.47:1,0,0	0/0:5,0:6:7.73:0,8,36	0/0:9,0:9:11.30:0,11,61	0/0:13,0:13:15.58:0,16,74	0/0:10,0:12:16.76:0,17,71	1/1:25,0:25:39.74:200,40,0	1/1:22,0:19:17.52:87,18,0	1/1:13,0:11:2.84:15,3,0
chr10	85338532	.	A	AT	7513.01	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-8.482;DP=657;FS=12.842;HRun=8;HaplotypeScore=72.0171;InbreedingCoeff=0.9940;MQ=68.33;MQ0=0;MQRankSum=-2.668;QD=25.38;ReadPosRankSum=-0.553;VQSLOD=4.4053;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93:0,93,842	1/1:1,10:11:24.07:277,24,0	0/0:22,0:19:11.81:0,12,222	0/0:15,0:14:26.95:0,27,235	0/0:22,0:22:45:0,45,411	0/0:19,0:20:56.05:0,56,494	0/0:20,0:19:54.03:0,54,494	1/1:7,17:24:51.11:555,51,0	0/0:17,0:16:47.99:0,48,430	1/1:2,16:18:41.90:449,42,0	1/1:5,20:21:51.14:577,51,0	0/0:30,0:30:86.99:0,87,783	0/0:21,0:21:59:0,59,547	0/0:21,0:21:60.03:0,60,548	1/1:3,29:32:47.76:800,48,0	1/1:1,18:19:45.13:515,45,0	1/1:2,26:28:66.20:762,66,0	0/0:26,0:26:68.97:0,69,617	1/1:3,15:18:45.13:517,45,0	1/1:2,25:27:69.17:777,69,0	1/1:1,19:20:48.05:529,48,0	0/0:31,0:30:78.01:0,78,705	0/0:29,0:29:72.03:0,72,659	0/0:26,0:26:69.01:0,69,624	0/0:27,0:27:60:0,60,545	1/1:6,26:29:69.19:784,69,0	1/1:2,27:29:66.20:762,66,0	1/1:5,7:12:18.05:208,18,0
chr10	85338717	.	A	AC	2163.33	PASS	AB=0.956;AC=24;AF=0.429;AN=56;BaseQRankSum=7.502;DP=818;FS=40.013;HRun=1;HaplotypeScore=479.0031;InbreedingCoeff=-0.5027;MQ=33.78;MQ0=20;MQRankSum=-4.198;QD=3.25;ReadPosRankSum=-2.672;VQSLOD=-0.1939;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,1:21:99:109,0,142	0/1:18,0:18:36.31:36,0,66	0/1:22,0:3:0.05:0,0,0	0/0:27,0:3:6.02:0,6,79	0/1:34,0:35:5.30:5,0,285	0/1:29,0:29:34.25:34,0,238	0/1:28,1:27:5.48:5,0,385	0/1:17,0:14:27.44:27,0,74	0/1:34,0:29:91.18:91,0,135	0/1:52,1:50:99:361,0,256	0/1:28,0:28:19.73:91,0,20	0/0:49,0:46:23.78:0,24,401	0/1:36,1:35:78.44:78,0,315	0/0:33,1:35:4.53:0,5,272	0/1:31,5:35:38.61:288,0,39	0/1:20,0:20:15.22:15,0,47	0/1:10,1:9:23.34:33,0,23	0/0:13,0:13:27.71:0,28,287	0/1:18,1:19:87.74:110,0,88	0/1:34,0:36:2.26:138,0,2	1/1:37,3:37:6.91:37,7,0	0/1:28,0:29:8.43:8,0,287	0/0:26,0:26:13.09:0,13,117	0/1:35,0:33:5.44:5,0,278	0/1:26,0:25:5.72:6,0,306	0/1:43,3:47:99:527,0,117	0/1:15,1:19:14.34:208,0,14	0/1:13,1:14:21.60:97,0,22
chr10	85338721	.	CACA	C	4216.21	PASS	AB=0.952;AC=25;AF=0.446;AN=56;BaseQRankSum=9.665;DP=893;FS=2.908;HRun=0;HaplotypeScore=515.3938;InbreedingCoeff=-0.5587;MQ=33.48;MQ0=23;MQRankSum=-4.720;QD=5.58;ReadPosRankSum=-1.703;VQSLOD=1.5830;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:15.84:0,16,493	0/1:18,0:19:94.85:136,0,95	1/1:25,0:3:2.51:7,3,0	0/0:33,0:4:8.39:0,8,131	0/1:38,0:38:46.19:46,0,612	0/1:33,0:33:99:107,0,654	0/1:30,0:27:77.20:77,0,715	0/1:12,8:17:63.93:309,0,64	0/1:34,1:31:99:162,0,340	0/1:54,6:56:99:494,0,565	0/1:23,6:28:58.57:128,0,59	0/1:50,0:47:16.86:17,0,967	0/1:37,1:36:99:185,0,711	0/1:34,0:36:99:220,0,723	1/1:34,5:36:8.68:567,9,0	0/1:19,2:21:30.86:357,0,31	0/1:12,0:10:54.72:100,0,55	0/0:15,0:15:20.29:0,20,699	0/1:20,1:21:57.37:57,0,214	0/1:39,0:40:99:273,0,108	0/1:45,0:41:99:118,0,102	0/1:33,0:32:8.26:8,0,548	0/0:29,0:28:26.02:0,26,481	0/0:37,0:34:30.20:0,30,800	0/1:32,0:31:32.03:32,0,655	0/1:48,4:52:99:485,0,397	0/1:19,2:21:88.54:128,0,89	0/1:17,2:19:72.46:205,0,72
chr10	85338736	.	CA	C	3084.74	PASS	AB=0.907;AC=23;AF=0.411;AN=56;BaseQRankSum=12.007;DP=1129;FS=6.607;HRun=2;HaplotypeScore=623.8291;InbreedingCoeff=-0.5572;MQ=34.63;MQ0=31;MQRankSum=-4.462;QD=3.59;ReadPosRankSum=0.616;VQSLOD=-0.6666;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:21,4:24:10.28:10,0,413	0/1:18,2:20:95.80:105,0,96	0/0:57,0:9:20.62:0,21,171	0/0:63,0:7:11.02:0,11,208	0/1:45,4:48:37.66:38,0,451	0/1:36,3:39:99:153,0,569	0/0:40,1:36:24.52:0,25,861	0/0:30,0:25:27.47:0,27,518	0/1:41,3:40:99:210,0,261	0/1:62,6:62:99:469,0,622	0/1:30,3:32:40.59:41,0,124	0/1:52,4:52:66.02:66,0,1019	0/1:41,1:38:99:99,0,580	0/1:39,1:40:99:138,0,605	0/1:40,4:42:62.50:220,0,63	0/1:25,5:30:99:210,0,131	0/1:15,2:15:75.47:75,0,160	0/1:17,1:18:5.37:5,0,575	0/1:19,8:27:99:285,0,229	0/1:48,6:53:62.24:246,0,62	0/1:43,3:43:39.33:39,0,278	0/1:44,2:45:8.99:9,0,540	0/0:33,1:34:28.60:0,29,397	0/0:43,0:40:32.87:0,33,749	0/1:43,5:48:61.12:61,0,556	0/1:52,9:60:99:412,0,428	1/1:20,2:23:4.46:226,4,0	0/1:20,1:21:99:126,0,123
chr10	85338739	.	CACA	C	4348.47	PASS	AB=0.955;AC=23;AF=0.411;AN=56;BaseQRankSum=13.310;DP=1160;FS=4.302;HRun=0;HaplotypeScore=641.3646;InbreedingCoeff=-0.5949;MQ=35.18;MQ0=35;MQRankSum=-5.173;QD=5.01;ReadPosRankSum=2.755;VQSLOD=0.1612;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:24.76:25,0,623	0/1:19,1:20:82.43:82,0,220	0/0:69,0:11:24.72:0,25,295	0/0:71,0:7:19.30:0,19,283	0/1:49,0:48:57.10:57,0,597	0/1:40,0:39:99:162,0,944	0/0:40,0:35:52.56:0,53,1521	0/1:30,2:27:96.40:96,0,665	0/1:45,0:41:99:211,0,468	0/1:67,4:65:99:432,0,706	0/1:31,3:32:45.66:46,0,239	0/1:56,0:53:10.29:10,0,1583	0/1:43,0:39:99:143,0,758	0/1:41,0:40:99:117,0,892	0/1:36,8:41:79.36:470,0,79	0/1:28,2:30:99:224,0,222	0/1:15,2:15:88.94:89,0,208	0/0:19,0:19:47.16:0,47,919	0/1:28,0:28:99:133,0,335	0/1:45,7:52:99:402,0,427	0/0:50,0:44:2.74:0,3,694	0/1:47,0:46:19.04:19,0,920	0/1:35,0:34:27.61:28,0,598	0/0:43,0:40:12.34:0,12,1111	0/1:48,0:48:99:204,0,818	0/1:52,11:59:99:752,0,476	1/1:21,3:24:3.58:357,4,0	0/1:20,2:22:57.39:291,0,57
chr10	85338748	.	CA	C	4354.07	PASS	AB=0.835;AC=21;AF=0.375;AN=56;BaseQRankSum=12.207;DP=1221;FS=79.511;HRun=2;HaplotypeScore=645.5832;InbreedingCoeff=-0.5879;MQ=34.90;MQ0=45;MQRankSum=-4.205;QD=4.98;ReadPosRankSum=1.980;VQSLOD=1.2743;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,2:26:31.23:0,31,577	0/1:20,1:21:99:110,0,187	0/0:79,0:11:24.34:0,24,268	0/0:87,0:8:21.07:0,21,296	0/1:36,13:48:61.46:61,0,397	0/1:28,10:40:99:121,0,713	0/1:33,7:36:19.86:20,0,986	0/0:31,3:27:18.16:0,18,607	0/1:32,11:41:99:251,0,450	0/1:60,9:62:99:369,0,716	0/1:32,4:32:99:102,0,209	0/1:47,12:58:99:200,0,1033	0/1:32,14:41:99:273,0,555	0/1:31,10:41:99:249,0,647	0/1:37,7:42:99:235,0,220	0/1:22,6:29:99:290,0,203	0/1:16,0:15:56.70:57,0,175	0/0:20,0:20:54.19:0,54,775	0/1:26,2:27:99:103,0,320	0/1:46,9:56:99:405,0,446	0/0:49,2:45:32.31:0,32,662	0/1:31,16:47:99:177,0,659	0/1:26,11:35:7.11:7,0,400	0/0:43,4:44:35.36:0,35,830	0/1:36,11:51:99:133,0,642	0/1:52,13:62:99:674,0,546	0/1:17,9:26:12.64:347,0,13	0/1:20,1:21:99:169,0,142
chr10	85338758	.	ACAG	A	4939.62	PASS	AB=0.975;AC=25;AF=0.446;AN=56;BaseQRankSum=15.171;DP=1206;FS=27.948;HRun=0;HaplotypeScore=663.8387;InbreedingCoeff=-0.6386;MQ=34.21;MQ0=40;MQRankSum=-6.974;QD=5.15;ReadPosRankSum=2.269;VQSLOD=-0.5615;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:35.30:35,0,816	0/1:18,2:21:71.98:302,0,72	0/0:83,0:10:22.98:0,23,306	0/0:93,0:7:15.03:0,15,250	0/1:50,0:49:71.75:72,0,608	0/1:41,0:40:99:194,0,926	0/1:38,0:34:22.63:23,0,1198	0/1:29,0:24:0.87:1,0,305	0/1:43,0:40:99:369,0,360	0/1:52,7:53:99:507,0,213	0/1:30,2:31:81.21:81,0,140	0/1:61,0:57:99:305,0,909	0/1:44,0:39:99:135,0,552	0/1:40,0:39:99:194,0,603	0/1:41,0:40:18.96:279,0,19	0/1:31,0:31:78.17:216,0,78	0/1:15,0:15:90.63:91,0,114	0/0:22,0:21:12.06:0,12,1027	0/1:27,0:26:99:149,0,100	0/1:53,0:54:99:323,0,339	0/0:48,0:41:18.18:0,18,356	0/1:51,0:50:99:143,0,934	0/1:34,0:32:14.93:15,0,509	0/1:46,0:43:29.14:29,0,1164	0/1:51,0:51:99:187,0,942	0/1:66,2:67:99:561,0,472	1/1:23,1:26:44.37:402,44,0	0/1:19,0:21:71.69:329,0,72
chr10	85338760	.	AG	A	8636.07	PASS	AB=0.805;AC=27;AF=0.482;AN=56;BaseQRankSum=16.606;DP=1181;FS=7.629;HRun=1;HaplotypeScore=624.6800;InbreedingCoeff=-0.7681;MQ=34.47;MQ0=40;MQRankSum=-9.721;QD=8.59;ReadPosRankSum=4.325;VQSLOD=1.9391;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,3:25:68.88:69,0,578	0/1:9,9:20:26.62:323,0,27	0/0:81,2:11:23.26:0,23,273	0/0:87,3:7:15.04:0,15,205	0/1:34,14:48:99:323,0,436	0/1:32,8:39:99:496,0,646	0/1:34,3:34:67.69:68,0,964	0/1:15,8:21:99:106,0,132	0/1:30,13:40:99:592,0,277	0/1:39,16:51:99:746,0,99	0/1:26,6:31:99:113,0,115	0/1:46,12:56:99:677,0,743	0/1:33,9:39:99:418,0,386	0/1:31,7:39:99:364,0,477	0/1:22,12:40:33.62:346,0,34	0/1:22,7:31:74.31:179,0,74	0/1:8,5:15:64.68:152,0,65	0/1:21,1:21:24.30:24,0,703	0/1:11,11:22:69.65:375,0,70	0/1:35,12:53:99:436,0,201	0/1:40,5:39:4.45:4,0,270	0/1:39,12:50:99:407,0,654	0/1:25,8:32:99:154,0,404	0/1:36,9:42:73.26:73,0,843	0/1:40,11:51:99:409,0,654	0/1:38,18:66:99:823,0,167	1/1:14,9:26:62.79:615,63,0	0/1:8,10:21:12.37:344,0,12
chr10	85338764	.	CA	C	5424.60	PASS	AB=0.857;AC=23;AF=0.411;AN=56;BaseQRankSum=14.840;DP=1189;FS=41.549;HRun=2;HaplotypeScore=635.9253;InbreedingCoeff=-0.5946;MQ=34.60;MQ0=42;MQRankSum=-7.312;QD=6.33;ReadPosRankSum=5.468;VQSLOD=1.5746;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:12:0,12,562	0/1:19,1:20:33.50:244,0,33	0/0:84,1:11:26.24:0,26,268	0/0:93,0:7:18:0,18,211	0/1:42,8:49:12.15:12,0,530	0/1:35,5:39:99:226,0,620	0/1:31,5:32:67.52:68,0,501	0/1:22,2:19:11.76:12,0,315	0/1:36,9:41:99:316,0,338	0/1:42,13:50:99:502,0,297	0/1:22,13:31:99:150,0,117	0/1:50,7:54:99:232,0,583	0/1:35,8:38:99:204,0,334	0/1:30,9:39:99:264,0,320	0/1:36,6:40:56.80:281,0,57	0/1:24,8:31:99:316,0,138	0/1:14,1:15:97.46:120,0,97	0/1:22,0:21:32.12:32,0,637	0/1:22,1:22:99:168,0,207	0/1:40,15:54:99:322,0,251	0/0:41,3:37:19.51:0,20,293	0/1:41,12:52:99:140,0,738	0/0:29,6:33:13.03:0,13,487	0/0:45,3:45:38.59:0,39,887	0/1:41,10:51:99:189,0,648	0/1:53,19:69:99:954,0,470	1/1:20,6:26:0.62:372,1,0	0/1:15,6:21:75.87:302,0,76
chr10	85338765	.	A	AC	5353.29	PASS	AB=0.909;AC=25;AF=0.446;AN=56;BaseQRankSum=15.874;DP=1195;FS=28.653;HRun=1;HaplotypeScore=648.5450;InbreedingCoeff=-0.6244;MQ=34.52;MQ0=42;MQRankSum=-6.873;QD=5.71;ReadPosRankSum=6.100;VQSLOD=1.9661;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:27:11.38:0,11,524	0/1:15,0:19:39.43:162,0,39	0/0:85,0:11:25.83:0,26,256	0/0:94,1:8:18:0,18,207	0/1:45,5:51:58.67:59,0,502	0/1:33,4:38:99:303,0,557	0/1:36,1:34:91.35:91,0,481	0/1:22,0:17:6.39:6,0,300	0/1:35,3:38:99:384,0,289	0/1:49,2:48:99:466,0,317	0/1:32,0:32:99:122,0,102	0/1:50,4:55:99:233,0,545	0/1:34,5:38:99:213,0,261	0/1:34,3:39:99:268,0,314	0/1:34,9:43:21.38:295,0,21	0/1:27,5:32:99:258,0,140	0/1:12,1:15:91.18:119,0,91	0/1:20,2:21:50.37:50,0,600	0/1:20,2:22:99:128,0,162	0/1:52,2:53:99:289,0,255	0/1:42,1:36:2.62:3,0,279	0/1:47,4:51:99:172,0,690	0/1:31,3:33:4.84:5,0,441	0/0:47,1:46:45.84:0,46,849	0/1:40,8:50:99:333,0,611	0/1:72,2:72:99:752,0,430	1/1:23,4:27:13.27:365,13,0	0/1:23,0:23:76.98:277,0,77
chr10	85338795	.	AG	A	3920.34	PASS	AB=0.869;AC=25;AF=0.446;AN=56;BaseQRankSum=15.864;DP=1023;FS=11.548;HRun=1;HaplotypeScore=430.8229;InbreedingCoeff=-0.6814;MQ=35.10;MQ0=52;MQRankSum=-11.610;QD=4.92;ReadPosRankSum=-2.152;VQSLOD=-0.7087;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:35:54.09:0,54,1087	1/1:10,1:14:1.61:209,2,0	0/0:99,10:7:11.60:0,12,95	0/1:91,10:12:26.12:26,0,136	0/1:35,9:49:99:220,0,618	0/1:18,5:26:99:172,0,515	0/1:13,7:20:67.05:67,0,190	0/1:16,3:19:99:99,0,111	0/1:30,5:35:53.65:54,0,824	0/1:19,5:27:55.68:226,0,56	0/1:19,5:29:55.81:226,0,56	0/1:23,5:33:99:195,0,208	0/1:25,2:29:99:112,0,318	0/1:11,4:21:99:120,0,132	0/1:29,0:30:28.43:95,0,28	0/1:15,3:22:42.08:42,0,165	0/1:16,1:17:54.41:54,0,126	0/0:21,0:22:17.85:0,18,679	0/1:9,1:11:62.54:70,0,63	0/1:36,6:48:90.93:286,0,91	0/1:30,0:26:2.86:3,0,161	0/1:22,6:33:99:281,0,471	0/1:18,7:25:99:116,0,537	0/0:55,0:56:60.45:0,60,1541	0/1:27,7:44:99:214,0,836	0/1:38,13:53:98.95:539,0,99	0/1:15,5:23:99:195,0,180	0/1:11,7:21:21.10:300,0,21
chr10	85338800	.	A	AACAC	2753.33	PASS	AB=0.833;AC=19;AF=0.339;AN=56;BaseQRankSum=5.038;DP=1049;FS=2.136;HRun=0;HaplotypeScore=454.1640;InbreedingCoeff=0.5300;MQ=35.79;MQ0=51;MQRankSum=-4.310;QD=8.55;ReadPosRankSum=-1.898;VQSLOD=0.6931;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:35:25.28:0,25,471	1/1:10,0:14:9.79:41,10,0	0/0:110,0:11:12.04:0,12,158	0/0:99,0:12:8.82:0,9,127	0/0:45,0:47:8.99:0,9,331	0/0:25,0:25:6.55:0,7,226	1/1:19,5:22:26.41:498,26,0	0/1:25,0:20:20.91:21,0,350	0/0:33,0:35:50.05:0,50,756	1/1:33,0:34:27.36:160,27,0	0/1:23,0:30:28.29:74,0,28	1/1:27,9:35:26.92:511,27,0	0/1:17,8:32:22.63:485,0,23	1/1:11,7:21:23.86:487,24,0	0/1:23,0:28:31.04:58,0,31	0/1:21,0:24:29.07:59,0,29	1/1:12,0:18:5.92:108,6,0	1/1:17,0:24:30.04:447,30,0	0/0:14,0:14:22.21:0,22,245	0/0:53,0:50:31.75:0,32,430	0/0:31,0:27:32.45:0,32,341	0/0:32,0:32:18.86:0,19,269	0/0:28,0:27:27.48:0,27,449	0/0:55,0:55:71.81:0,72,1103	0/0:42,0:45:11.96:0,12,460	0/0:58,0:54:38.66:0,39,504	0/0:24,0:24:31.47:0,31,486	0/0:25,0:25:9.31:0,9,289
chr10	85339159	.	G	GT	2965.71	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=1.055;DP=734;FS=2.524;HRun=6;HaplotypeScore=77.1750;InbreedingCoeff=0.9974;MQ=78.34;MQ0=1;MQRankSum=-1.502;QD=30.89;ReadPosRankSum=1.559;VQSLOD=4.2919;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,1138	1/1:0,9:9:27.02:320,27,0	0/0:26,0:26:60.07:0,60,587	0/0:35,0:35:78.02:0,78,764	0/0:19,0:19:48.10:0,48,484	0/0:18,0:17:51.08:0,51,506	0/0:20,0:20:57.12:0,57,576	0/0:36,0:36:99:0,102,1018	0/0:20,0:20:54.07:0,54,529	1/1:2,27:30:84.13:1033,84,0	1/1:1,22:23:60.19:755,60,0	0/0:30,0:30:78.11:0,78,771	0/0:24,0:24:69.16:0,69,704	0/0:21,0:21:63.09:0,63,620	0/0:34,0:34:93.20:0,93,943	0/0:32,0:32:87.18:0,87,880	1/1:1,33:34:81.26:1019,81,0	0/0:28,0:28:78.15:0,78,786	0/0:21,0:21:57.07:0,57,553	0/0:31,0:31:93.17:0,93,927	0/0:28,0:28:72.16:0,72,734	0/0:14,0:14:39.07:0,39,391	0/0:20,0:20:57.13:0,57,581	0/0:41,0:41:99:0,117,1193	0/0:30,0:30:84.17:0,84,850	0/0:21,0:21:60.12:0,60,606	0/0:41,0:39:99:0,108,1101	0/0:6,0:6:18.04:0,18,183
chr10	85339763	.	ACAGTGACAGATGCT	A	12734.01	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.726;DP=624;FS=11.868;HRun=0;HaplotypeScore=268.8946;InbreedingCoeff=0.9965;MQ=87.53;MQ0=0;MQRankSum=-14.835;QD=81.63;ReadPosRankSum=2.112;VQSLOD=2.9269;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,8569	0/0:9,0:9:24.08:0,24,1493	0/0:26,0:26:59.58:0,60,3233	0/0:22,0:22:66.23:0,66,3498	0/0:23,0:23:66.23:0,66,4162	0/0:24,0:24:69.24:0,69,4363	0/0:18,0:18:54.19:0,54,3438	1/1:11,9:20:27.08:1040,27,0	0/0:26,0:26:78.25:0,78,4794	0/0:34,0:34:96.32:0,96,5871	0/0:13,0:13:39.13:0,39,2687	0/0:27,0:27:81.28:0,81,4898	0/0:30,0:30:90.31:0,90,5792	0/0:22,0:22:63.22:0,63,4069	1/1:4,21:25:60.21:2460,60,0	1/1:7,18:25:54.19:2282,54,0	0/0:35,0:35:99:0,102,6854	0/0:24,0:24:69.24:0,69,4726	1/1:6,13:19:39.12:1465,39,0	1/1:1,10:11:27.09:1006,27,0	1/1:7,11:18:24.08:969,24,0	0/0:23,0:23:63.22:0,63,4051	0/0:14,0:14:36.12:0,36,2284	0/0:30,0:30:87.30:0,87,5739	0/0:20,0:19:60.21:0,60,3939	1/1:3,13:16:36.12:1522,36,0	1/1:3,13:16:33.11:1357,33,0	1/1:0,6:6:15.05:633,15,0
chr10	85341644	.	G	GTTT	9078.06	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-3.087;DP=582;FS=0.716;HRun=10;HaplotypeScore=170.0292;InbreedingCoeff=0.9667;MQ=69.73;MQ0=0;MQRankSum=-7.428;QD=35.88;ReadPosRankSum=-6.033;VQSLOD=1.0905;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:10,8:20:56.76:795,57,0	1/1:3,5:12:36.05:545,36,0	0/0:34,0:28:6.34:0,6,382	0/0:21,0:15:13.58:0,14,228	0/0:30,0:31:87.15:0,87,1012	0/0:24,0:26:62.95:0,63,794	0/0:6,0:21:35.08:0,35,250	1/1:13,9:24:51.12:800,51,0	0/0:17,0:18:17.72:0,18,398	1/1:8,11:20:42.12:719,42,0	1/1:14,6:21:34.83:619,35,0	0/0:1,0:16:41.19:0,41,250	0/0:3,0:22:42.25:0,42,306	0/0:5,0:12:12.08:0,12,99	0/0:18,0:19:30.40:0,30,491	0/0:26,0:26:69.08:0,69,816	1/1:12,12:24:55.32:873,55,0	1/1:2,0:14:14.26:58,14,0	1/1:10,2:13:29.70:425,30,0	1/1:12,16:31:78.21:1336,78,0	1/1:6,1:7:9.03:140,9,0	0/0:16,0:18:40.34:0,40,472	0/0:17,0:19:24.06:0,24,468	0/0:20,0:21:52.63:0,53,604	0/0:25,0:25:57.04:0,57,673	1/1:8,14:24:72.24:1266,72,0	1/1:19,10:32:60:1055,60,0	1/1:2,7:10:24.55:447,25,0
chr10	85342161	.	T	TA	11410.10	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=10.792;DP=540;FS=1.018;HRun=1;HaplotypeScore=73.3932;InbreedingCoeff=0.9993;MQ=89.70;MQ0=0;MQRankSum=-2.755;QD=45.28;ReadPosRankSum=0.312;VQSLOD=4.3822;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:34:90.29:1415,90,0	1/1:0,10:10:27.09:431,27,0	0/0:19,0:19:54.13:0,54,712	0/0:22,1:23:63.20:0,63,859	0/0:22,0:22:66.22:0,66,923	0/0:14,0:14:42.12:0,42,568	0/0:20,0:20:60.19:0,60,822	1/1:2,35:37:99:1670,108,0	0/0:20,0:20:60.20:0,60,837	1/1:0,14:14:42.14:672,42,0	1/1:0,8:8:21.07:336,21,0	0/0:22,0:22:66.22:0,66,923	0/0:19,0:19:51.17:0,51,712	0/0:13,0:13:36.10:0,36,485	0/0:20,0:20:60.20:0,60,839	0/0:26,0:26:72.24:0,72,1007	1/1:1,19:20:57.19:899,57,0	1/1:0,16:16:48.16:767,48,0	1/1:0,17:17:51.17:815,51,0	1/1:0,19:19:57.19:900,57,0	1/1:1,20:21:60.20:959,60,0	0/0:15,0:15:45.15:0,45,629	0/0:18,0:18:54.17:0,54,738	0/0:20,0:20:60.11:0,60,795	0/0:17,0:17:48.15:0,48,654	1/1:1,18:19:57.18:889,57,0	1/1:2,22:24:66.22:1033,66,0	1/1:0,13:13:39.13:623,39,0
chr10	85342251	.	CG	C	7121.58	PASS	AB=0.538;AC=17;AF=0.304;AN=56;BaseQRankSum=9.492;DP=496;FS=2.446;HRun=1;HaplotypeScore=53.1133;InbreedingCoeff=0.9153;MQ=91.94;MQ0=0;MQRankSum=-2.615;QD=40.23;ReadPosRankSum=1.858;VQSLOD=5.4582;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:96.32:1342,96,0	0/0:7,0:7:21.07:0,21,335	0/0:19,0:18:48.15:0,48,723	0/0:22,0:22:52.49:0,52,801	0/0:17,0:17:51.13:0,51,782	0/0:9,0:9:27.05:0,27,403	0/0:27,0:27:81.17:0,81,1193	1/1:0,26:26:78.26:1090,78,0	0/0:10,0:10:30.10:0,30,472	0/0:17,0:17:51.04:0,51,781	0/0:8,0:8:24.08:0,24,383	0/0:18,0:18:54.17:0,54,838	0/0:20,0:20:60.20:0,60,957	0/0:17,0:17:48.15:0,48,742	0/0:16,0:16:48.15:0,48,736	0/0:21,0:21:63.20:0,63,979	0/0:23,0:23:69.24:0,69,1100	1/1:0,19:19:54.18:751,54,0	1/1:0,17:17:48.15:654,48,0	1/1:1,20:21:60.16:824,60,0	1/1:0,30:30:87.29:1212,87,0	0/0:11,0:11:33.07:0,33,499	0/0:17,0:17:51.17:0,51,811	0/0:30,0:30:90.20:0,90,1344	0/0:10,0:10:30.10:0,30,479	0/1:2,12:14:5.70:502,0,6	1/1:1,15:16:48.16:662,48,0	1/1:0,2:2:6.02:84,6,0
chr10	85342442	.	TC	T	11880.61	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=11.559;DP=580;FS=4.569;HRun=5;HaplotypeScore=86.3495;InbreedingCoeff=0.9914;MQ=81.32;MQ0=0;MQRankSum=-3.584;QD=30.08;ReadPosRankSum=2.358;VQSLOD=5.4947;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,54:55:99:1667,147,0	1/1:0,6:6:18.05:204,18,0	0/0:20,0:20:42.94:0,43,572	0/0:28,0:28:49.79:0,50,696	0/0:25,0:25:69.22:0,69,927	0/0:20,0:20:54.18:0,54,737	1/1:3,14:17:39.11:442,39,0	1/1:2,23:25:69.18:774,69,0	0/0:18,0:18:51.17:0,51,697	1/1:1,16:17:48.14:544,48,0	1/1:0,24:24:66.19:749,66,0	1/1:0,17:17:48.14:545,48,0	1/1:2,18:20:48.14:545,48,0	1/1:1,15:16:45.13:511,45,0	1/1:1,20:21:48.14:545,48,0	1/1:1,19:20:10.11:504,10,0	1/1:3,27:30:75.21:850,75,0	1/1:1,13:14:39.11:442,39,0	1/1:0,20:20:60.15:668,60,0	1/1:2,17:19:51.14:578,51,0	1/1:0,13:13:39.11:442,39,0	0/0:16,0:16:48.16:0,48,653	0/0:19,0:19:54.18:0,54,735	0/0:20,0:20:60.20:0,60,821	0/0:19,0:19:51.14:0,51,651	1/1:0,22:22:63.18:715,63,0	1/1:0,27:27:72.21:816,72,0	1/1:0,12:12:30.09:340,30,0
chr10	85342717	.	T	TA	1548.24	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-2.243;DP=585;FS=9.817;HRun=11;HaplotypeScore=74.5960;InbreedingCoeff=0.8818;MQ=77.99;MQ0=1;MQRankSum=0.987;QD=17.80;ReadPosRankSum=-0.025;VQSLOD=4.1675;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:46:79.42:0,79,230	1/1:0,3:3:6.01:61,6,0	0/0:23,0:24:25.99:0,26,156	0/0:11,0:11:8.40:0,8,53	0/0:24,1:25:17.30:0,17,313	0/0:27,0:27:62.74:0,63,487	0/0:18,0:18:41.77:0,42,320	0/0:36,2:38:22.74:0,23,474	0/0:27,0:27:62.21:0,62,478	1/1:4,23:27:69.05:668,69,0	1/1:3,16:19:41.96:393,42,0	0/0:13,0:13:35.84:0,36,275	0/0:19,0:19:53.28:0,53,402	0/0:12,0:12:29.47:0,29,217	0/0:21,0:22:46.22:0,46,339	0/0:11,0:12:31.92:0,32,238	1/1:8,29:38:2.49:570,2,0	0/0:3,0:21:32.59:0,33,96	0/0:20,0:20:47.81:0,48,371	0/0:21,0:21:26.81:0,27,344	0/0:11,0:11:26.89:0,27,209	0/0:14,0:15:34.52:0,35,240	0/0:15,0:15:35.84:0,36,276	0/0:18,0:18:44.82:0,45,348	0/0:15,0:16:34.88:0,35,261	0/0:29,0:29:55.76:0,56,422	0/0:30,0:30:39.53:0,40,436	0/0:6,0:6:11.94:0,12,93
chr10	85342850	.	TC	T	5995.42	PASS	AB=0.528;AC=13;AF=0.232;AN=56;BaseQRankSum=10.839;DP=687;FS=33.766;HRun=3;HaplotypeScore=73.9424;InbreedingCoeff=0.9156;MQ=88.71;MQ0=0;MQRankSum=-2.477;QD=33.12;ReadPosRankSum=-0.076;VQSLOD=2.4684;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1467	0/0:10,0:10:27.09:0,27,389	0/0:26,0:26:75.25:0,75,1063	0/0:26,0:26:69.23:0,69,960	0/0:28,0:28:81.27:0,81,1166	0/0:15,0:15:45.15:0,45,647	0/0:19,0:19:54.18:0,54,776	1/1:0,29:29:84.21:992,84,0	0/0:28,0:28:81.25:0,81,1145	0/0:25,0:25:72.22:0,72,1018	0/0:22,0:22:63.21:0,63,906	0/0:14,0:14:42.14:0,42,605	0/0:29,0:29:84.27:0,84,1191	0/0:18,0:18:54.17:0,54,758	0/0:34,0:34:99:0,102,1450	0/0:20,0:20:60.20:0,60,864	0/0:47,0:47:99:0,138,1947	0/0:20,0:20:57.19:0,57,818	1/1:2,22:24:66.19:806,66,0	1/1:1,26:27:66.21:818,66,0	1/1:1,36:37:99:1265,102,0	0/0:21,0:21:63.19:0,63,867	0/0:25,0:25:72.22:0,72,1016	0/0:22,0:22:60.20:0,60,863	0/0:20,0:20:60.19:0,60,848	0/1:3,25:28:7.44:813,0,7	1/1:0,20:20:57.18:707,57,0	1/1:0,16:16:48.15:595,48,0
chr10	85344882	.	C	CTGTGTGTG	5985.65	PASS	AB=1.000;AC=31;AF=0.574;AN=54;BaseQRankSum=5.703;DP=599;FS=3.839;HRun=0;HaplotypeScore=176.1292;InbreedingCoeff=0.6773;MQ=65.35;MQ0=13;MQRankSum=-6.753;QD=18.25;ReadPosRankSum=-3.777;VQSLOD=3.7199;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	./.	1/1:6,0:6:9.03:192,9,0	0/0:39,0:23:23.29:0,23,415	0/0:31,0:20:1.11:0,1,13	0/0:18,0:18:39.10:0,39,890	0/0:22,0:23:39.13:0,39,923	1/1:23,0:19:0.94:2,1,0	1/1:31,0:30:45.95:605,46,0	0/0:26,0:27:54.50:0,54,1263	1/1:22,0:21:36.78:686,37,0	1/1:14,0:14:9.97:295,10,0	1/1:15,0:14:15.01:319,15,0	1/1:17,0:17:15.05:473,15,0	1/1:14,0:13:2.40:59,2,0	0/1:21,0:21:0.74:1,0,163	0/0:14,0:13:22.57:0,23,234	1/1:21,0:21:27.56:529,28,0	1/1:10,0:10:9.03:259,9,0	0/1:24,0:23:20.94:472,0,21	1/1:31,0:31:4.26:595,4,0	0/1:19,0:19:11.48:66,0,11	0/0:17,0:17:21.07:0,21,521	0/0:22,0:22:33.06:0,33,738	0/0:36,0:35:66.21:0,66,1604	0/0:19,0:19:48.14:0,48,1071	1/1:24,0:23:39.06:576,39,0	1/1:30,0:30:44.84:696,45,0	1/1:6,0:6:11.71:159,12,0
chr10	85344903	.	TGA	T	378.64	PASS	AB=0.957;AC=15;AF=0.341;AN=44;BaseQRankSum=3.461;DP=587;FS=4.839;HRun=0;HaplotypeScore=117.7912;InbreedingCoeff=0.0032;MQ=48.13;MQ0=28;MQRankSum=-4.559;QD=1.48;ReadPosRankSum=-1.877;VQSLOD=1.7137;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:4,1:5:6.02:68,6,0	./.	./.	0/0:18,0:18:12.04:0,12,177	0/1:23,1:24:18.41:18,0,265	0/0:20,0:13:0.89:0,1,2	0/1:37,0:36:61.11:61,0,80	0/0:32,0:32:24.91:0,25,426	1/1:24,0:21:6.43:69,6,0	./.	0/0:15,0:14:3.33:0,3,18	0/0:17,0:17:9.08:0,9,40	./.	0/0:19,0:19:10.47:0,10,66	0/0:13,0:11:7.67:0,8,29	0/1:15,6:20:10.01:130,0,10	0/1:12,0:11:1.39:14,0,1	0/1:20,0:17:6.31:6,0,51	0/0:23,0:23:9.41:0,9,39	./.	0/1:19,0:18:9.61:10,0,100	0/0:24,1:25:27.06:0,27,360	0/1:39,1:39:10.26:10,0,642	0/1:21,2:23:79.33:79,0,140	0/1:23,0:21:29.20:29,0,55	0/0:30,0:28:3.80:0,4,82	1/1:6,0:6:2.94:18,3,0
chr10	85344932	.	GAGAC	G	576.80	PASS	AB=1.000;AC=22;AF=0.458;AN=48;BaseQRankSum=6.130;DP=494;FS=18.173;HRun=0;HaplotypeScore=105.7951;InbreedingCoeff=0.1212;MQ=38.33;MQ0=43;MQRankSum=-5.287;QD=2.15;ReadPosRankSum=-2.212;VQSLOD=0.6081;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:7,0:6:11.69:15,0,12	./.	./.	0/0:17,0:17:24.48:0,24,280	0/0:26,0:23:37.35:0,37,486	1/1:20,0:12:2.66:17,3,0	1/1:34,0:34:33.87:228,34,0	0/0:22,4:25:48.08:0,48,691	0/1:19,0:14:11.77:12,0,92	./.	1/1:13,0:11:3.77:19,4,0	1/1:11,0:9:6.61:31,7,0	0/1:11,0:7:0:0,0,0	1/1:18,0:15:5.93:40,6,0	0/1:15,0:12:14.99:50,0,15	0/0:17,0:16:9.82:0,10,96	0/1:12,0:10:7.65:8,0,57	0/1:19,0:17:26.10:76,0,26	0/1:15,0:15:21.79:29,0,22	0/0:21,0:13:2.98:0,3,21	0/0:25,0:23:22.89:0,23,201	0/0:24,0:23:30.55:0,31,455	0/0:43,0:40:86.30:0,86,1273	0/1:27,0:24:26.46:26,0,144	0/1:19,0:16:63.74:150,0,64	0/1:26,0:22:0.39:0,0,102	1/1:2,0:2:3:27,3,0
chr10	85344934	.	GAC	G	1098.13	PASS	AB=0.949;AC=25;AF=0.521;AN=48;BaseQRankSum=6.084;DP=489;FS=23.293;HRun=0;HaplotypeScore=92.4136;InbreedingCoeff=0.0048;MQ=38.31;MQ0=45;MQRankSum=-4.738;QD=3.59;ReadPosRankSum=-1.683;VQSLOD=0.5000;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:7,0:6:11.06:32,0,11	./.	./.	0/0:18,0:18:27.48:0,27,321	0/1:26,0:22:11.12:11,0,373	1/1:20,0:12:2.76:16,3,0	1/1:21,12:33:34.77:320,35,0	0/0:26,0:25:47.75:0,48,595	0/1:17,1:13:16.69:17,0,119	./.	1/1:13,0:11:3.76:19,4,0	1/1:10,1:9:6.34:28,6,0	0/1:12,0:8:0.01:0,0,0	1/1:15,2:14:7.75:45,8,0	0/1:14,1:12:19.66:69,0,20	0/1:15,2:16:60.92:88,0,61	0/1:12,0:10:33.82:34,0,38	1/1:17,1:16:14.77:182,15,0	0/1:12,2:14:15.94:48,0,16	0/0:20,1:13:2.98:0,3,21	0/0:25,0:23:7.88:0,8,160	0/0:23,0:22:30.07:0,30,439	0/0:43,0:40:65.70:0,66,1105	0/1:26,0:23:61.66:62,0,118	0/1:18,0:16:46.23:188,0,46	0/1:21,3:22:57.85:58,0,100	1/1:0,0:2:3.01:38,3,0
chr10	85344946	.	GAC	G	297.88	PASS	AB=0.943;AC=20;AF=0.417;AN=48;BaseQRankSum=5.096;DP=477;FS=0.830;HRun=0;HaplotypeScore=89.3967;InbreedingCoeff=0.1642;MQ=37.59;MQ0=46;MQRankSum=-2.137;QD=1.28;ReadPosRankSum=-2.263;VQSLOD=1.5643;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:6:8.76:0,9,115	./.	./.	0/1:19,1:20:7.28:7,0,484	0/0:29,0:24:45.02:0,45,697	1/1:20,0:11:1.10:2,1,0	0/0:36,0:35:68.76:0,69,991	0/0:23,1:23:41.92:0,42,687	0/0:16,1:12:30.06:0,30,469	./.	0/1:12,0:10:0.10:0,0,0	1/1:8,1:7:4.17:20,4,0	1/1:11,3:10:3.83:45,4,0	1/1:14,0:11:1.55:4,2,0	0/1:14,0:11:11.30:11,0,82	0/1:18,1:17:19.58:20,0,345	0/1:10,2:10:79.37:79,0,95	0/0:12,0:10:26.47:0,26,235	1/1:5,3:8:6.02:91,6,0	1/1:21,2:15:3.01:46,3,0	0/0:21,0:19:29.97:0,30,566	0/0:20,1:20:27.03:0,27,410	0/0:48,2:47:99:0,105,1874	0/1:29,2:28:39.05:39,0,371	0/1:14,2:13:24.22:24,0,220	0/1:19,1:17:52.89:53,0,104	0/0:2,0:2:2.84:0,3,14
chr10	85344956	.	GAGAC	G	40.49	PASS	AB=0.971;AC=12;AF=0.261;AN=46;BaseQRankSum=6.103;DP=449;FS=0.000;HRun=0;HaplotypeScore=85.8110;InbreedingCoeff=0.2397;MQ=37.79;MQ0=50;MQRankSum=-6.112;QD=0.34;ReadPosRankSum=-1.961;VQSLOD=1.4065;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:6:8.42:0,8,89	./.	./.	0/0:18,0:18:34.67:0,35,615	0/0:33,0:28:48.11:0,48,828	1/1:19,2:13:2.62:45,3,0	0/1:29,0:27:13.27:13,0,411	0/0:24,0:23:51.17:0,51,1004	0/0:12,0:7:2.70:0,3,145	./.	1/1:11,1:10:0.37:1,0,0	1/1:7,0:5:2.99:23,3,0	0/1:13,2:10:8.52:9,0,35	./.	0/1:16,0:13:28.87:29,0,42	0/0:16,0:14:7.63:0,8,218	0/0:11,0:9:11.46:0,11,250	0/0:6,0:5:4.67:0,5,24	0/0:6,0:6:6.02:0,6,115	0/0:20,0:12:3.01:0,3,62	0/0:24,0:22:33.11:0,33,655	0/0:20,0:19:18.53:0,19,391	0/0:54,0:50:99:0,113,2213	0/0:27,0:22:21.07:0,21,368	0/1:14,0:11:7.45:7,0,192	0/0:14,0:11:8.30:0,8,136	1/1:4,0:4:5.57:38,6,0
chr10	85344962	.	GAGAC	G	512.07	PASS	AB=0.931;AC=18;AF=0.375;AN=48;BaseQRankSum=7.064;DP=429;FS=1.788;HRun=0;HaplotypeScore=84.0464;InbreedingCoeff=0.1133;MQ=38.17;MQ0=47;MQRankSum=-6.875;QD=2.98;ReadPosRankSum=-3.925;VQSLOD=0.7673;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:7,0:6:11.14:11,0,53	./.	./.	0/0:18,0:18:38.77:0,39,631	0/0:30,0:25:45.11:0,45,804	1/1:20,0:13:2.62:47,3,0	0/1:19,4:21:99:174,0,256	0/0:24,0:23:51.17:0,51,992	0/1:8,2:6:49.61:67,0,50	./.	1/1:15,0:13:2.86:7,3,0	1/1:8,0:6:3.11:9,3,0	0/1:16,0:11:8.61:9,0,36	1/1:18,0:14:2.99:24,3,0	0/1:15,0:12:12.39:29,0,12	0/1:15,1:14:68.42:68,0,246	0/0:11,0:9:14.08:0,14,257	0/1:6,0:4:6.84:13,0,7	0/0:5,0:5:6.02:0,6,116	0/0:17,0:10:3.01:0,3,62	0/0:25,0:23:33.11:0,33,655	0/0:18,0:17:21.54:0,22,432	0/0:55,0:51:99:0,114,2180	0/0:24,0:19:21.07:0,21,370	0/1:11,3:11:99:145,0,165	0/0:13,0:10:6.46:0,6,98	1/1:4,0:4:8.87:57,9,0
chr10	85344970	.	GAC	G	332.38	PASS	AB=0.973;AC=18;AF=0.375;AN=48;BaseQRankSum=8.453;DP=408;FS=0.000;HRun=0;HaplotypeScore=77.5903;InbreedingCoeff=0.0656;MQ=38.92;MQ0=48;MQRankSum=-6.988;QD=1.86;ReadPosRankSum=-6.573;VQSLOD=-0.5850;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:8,0:7:38.81:39,0,46	./.	./.	0/0:17,0:17:24.04:0,24,603	0/0:29,0:24:42.12:0,42,773	0/1:19,1:13:0:0,0,0	0/1:17,0:15:19.80:20,0,405	0/0:23,0:22:51.09:0,51,841	0/1:10,0:5:41.13:45,0,41	./.	1/1:14,3:15:10.65:74,11,0	0/1:7,1:6:9.30:15,0,9	0/1:14,2:11:16.17:16,0,48	1/1:16,0:12:2.99:24,3,0	1/1:16,0:14:3.95:77,4,0	0/1:14,0:12:36.89:37,0,231	0/0:10,0:8:14.08:0,14,231	0/1:4,0:3:10.50:10,0,30	0/0:4,0:4:6.02:0,6,115	0/0:17,0:10:3.01:0,3,58	0/0:23,0:21:35.99:0,36,678	0/0:15,0:14:21.07:0,21,399	0/0:55,0:51:85.40:0,85,1954	0/0:24,0:19:26.98:0,27,466	0/1:15,0:12:77.26:77,0,181	0/1:14,0:11:7.26:7,0,53	1/1:4,0:4:7.05:41,7,0
chr10	85344982	.	GAC	G	119.91	PASS	AB=0.944;AC=13;AF=0.260;AN=50;BaseQRankSum=6.380;DP=393;FS=0.000;HRun=0;HaplotypeScore=84.8990;InbreedingCoeff=0.4335;MQ=40.64;MQ0=46;MQRankSum=-4.301;QD=1.15;ReadPosRankSum=-3.385;VQSLOD=0.8430;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:2.74:12,3,0	0/0:9,0:9:10.04:0,10,110	./.	./.	0/0:16,0:16:24.69:0,25,625	0/0:31,0:26:57.04:0,57,1007	1/1:12,3:10:2.59:43,3,0	0/0:14,0:12:12.32:0,12,238	0/0:21,0:20:51.16:0,51,946	0/0:8,0:5:11.83:0,12,93	./.	1/1:7,6:12:8.91:97,9,0	1/1:6,3:7:6.01:61,6,0	0/1:12,3:11:26.99:27,0,52	1/1:14,0:10:2.44:6,2,0	0/0:16,0:14:8.85:0,9,52	0/0:16,0:14:32.74:0,33,344	0/1:11,0:9:6.30:6,0,137	0/0:7,0:4:8.13:0,8,59	0/0:3,0:3:6.02:0,6,115	0/0:17,0:11:3.01:0,3,58	0/0:21,0:20:38.98:0,39,711	0/0:16,0:15:21.07:0,21,392	0/0:53,0:51:99:0,120,2167	0/0:21,0:16:27.02:0,27,516	0/0:13,0:11:9.22:0,9,178	0/1:20,0:17:1.22:1,0,105	0/0:4,0:4:1.08:0,1,29
chr10	85345010	.	CAG	C	2456.44	PASS	AB=0.734;AC=22;AF=0.407;AN=54;BaseQRankSum=9.928;DP=432;FS=13.396;HRun=0;HaplotypeScore=95.5001;InbreedingCoeff=0.3146;MQ=62.52;MQ0=30;MQRankSum=-7.220;QD=12.04;ReadPosRankSum=-1.620;VQSLOD=2.2063;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,3:7:6.02:69,6,0	1/1:7,3:9:17.79:147,18,0	0/0:18,0:8:11.98:0,12,137	0/1:26,1:13:18.29:20,0,18	0/0:16,0:16:38.42:0,38,655	0/0:28,0:25:66.21:0,66,1093	1/1:7,4:8:11.76:141,12,0	0/1:4,6:9:99:129,0,114	0/0:21,0:20:54.17:0,54,892	0/1:6,4:8:18.89:167,0,19	./.	1/1:6,10:16:18.03:187,18,0	1/1:1,8:9:8.94:81,9,0	0/1:9,6:12:8.03:122,0,8	0/0:13,0:12:15.05:0,15,255	0/0:17,0:17:33.04:0,33,532	0/1:15,3:17:17.53:220,0,18	0/1:9,4:13:66.47:216,0,66	0/1:5,6:8:20.39:161,0,20	0/0:3,2:5:6.02:0,6,78	0/0:5,11:14:2.64:0,3,45	0/0:18,0:17:42.13:0,42,679	0/0:12,0:11:24.08:0,24,405	0/0:40,0:39:87.28:0,87,1452	0/0:15,0:11:24.08:0,24,396	0/1:4,10:12:18.32:275,0,18	1/1:11,11:21:8.38:431,8,0	1/1:6,4:10:26.84:275,27,0
chr10	85345712	.	T	TA	4741.35	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-6.282;DP=499;FS=1.273;HRun=11;HaplotypeScore=52.2211;InbreedingCoeff=0.9220;MQ=71.65;MQ0=0;MQRankSum=1.345;QD=15.91;ReadPosRankSum=-1.095;VQSLOD=4.9860;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:53.73:0,54,415	1/1:1,9:10:6.82:251,7,0	0/0:8,0:8:14.92:0,15,113	0/0:10,0:8:4.17:0,4,16	0/0:22,0:22:47.76:0,48,368	0/0:18,1:19:20.37:0,20,341	1/1:4,1:19:24.58:120,25,0	1/1:6,17:23:10.60:452,11,0	0/0:16,0:16:11.98:0,12,287	1/1:2,13:15:30.03:296,30,0	1/1:7,25:32:48.25:604,48,0	1/1:3,0:14:17.04:87,17,0	1/1:5,0:17:24.85:123,25,0	1/1:2,0:18:17.08:87,17,0	0/0:15,0:15:41.83:0,42,325	0/0:14,0:14:32.86:0,33,255	1/1:5,22:27:14.01:447,14,0	0/0:15,0:15:32.80:0,33,249	1/1:7,11:18:9.79:271,10,0	1/1:7,23:30:65.99:644,66,0	1/1:3,10:13:24.05:244,24,0	0/0:18,1:19:20.33:0,20,338	0/0:18,0:19:40.85:0,41,305	0/0:9,0:9:26.90:0,27,209	0/0:11,0:11:5.81:0,6,173	1/1:9,21:30:51.08:507,51,0	1/1:5,18:23:48.09:487,48,0	1/1:4,4:8:12.02:122,12,0
chr10	85346616	.	AGT	A	1665.48	PASS	AB=0.933;AC=31;AF=0.596;AN=52;BaseQRankSum=4.520;DP=716;FS=7.243;HRun=0;HaplotypeScore=115.5575;InbreedingCoeff=0.4295;MQ=65.24;MQ0=19;MQRankSum=1.429;QD=3.58;ReadPosRankSum=3.595;VQSLOD=1.7600;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:49:12.23:0,12,88	0/1:4,1:11:1.11:1,0,118	./.	./.	0/0:23,0:22:29.38:0,29,319	0/0:16,0:16:14.83:0,15,165	1/1:12,0:19:14.16:69,14,0	1/1:32,2:32:2.97:25,3,0	0/1:24,2:27:64.68:65,0,276	0/0:24,0:26:45.09:0,45,511	0/0:9,0:19:13.79:0,14,147	1/1:19,0:32:27.79:133,28,0	1/1:16,0:19:11.36:56,11,0	1/1:17,0:30:22.08:101,22,0	0/0:21,0:20:8.97:0,9,77	0/0:20,0:18:5.99:0,6,50	0/1:19,1:34:3.29:3,0,226	1/1:12,0:21:1.45:67,1,0	1/1:13,1:12:6.02:66,6,0	1/1:12,9:25:35.26:316,35,0	1/1:33,14:45:15.04:165,15,0	0/1:16,0:16:0.54:1,0,226	0/1:18,0:18:16.21:16,0,225	0/1:24,2:26:33.04:33,0,328	0/1:22,4:26:83.67:84,0,294	1/1:14,7:21:20.86:196,21,0	1/1:8,8:17:18.96:190,19,0	1/1:9,10:20:26.74:259,27,0
chr10	85346653	.	G	GTGTGTGTGTGTGT	1479.46	PASS	AB=0.902;AC=6;AF=0.107;AN=56;BaseQRankSum=6.765;DP=744;FS=0.942;HRun=0;HaplotypeScore=262.7498;InbreedingCoeff=0.3838;MQ=58.45;MQ0=32;MQRankSum=-7.530;QD=9.36;ReadPosRankSum=-6.125;VQSLOD=0.7432;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:42:84.65:85,0,345	0/0:11,0:11:16.55:0,17,296	0/0:46,0:24:39.18:0,39,628	0/0:45,0:24:61.99:0,62,769	0/0:24,0:24:55.64:0,56,965	0/0:16,0:16:28.80:0,29,556	0/0:21,0:21:50.76:0,51,877	0/0:24,0:22:60.19:0,60,758	0/0:26,0:26:60.16:0,60,1365	0/0:30,0:30:28.13:0,28,1036	0/0:23,0:23:28.68:0,29,571	0/0:27,0:27:62.69:0,63,1266	0/0:15,0:14:36.10:0,36,687	0/0:22,0:21:33.13:0,33,786	1/1:6,16:33:10.59:481,11,0	0/1:12,14:28:0.94:1000,0,1	0/0:36,0:35:56.10:0,56,916	0/1:25,0:25:3.10:3,0,925	0/0:16,0:16:42.04:0,42,641	0/0:21,0:21:47.87:0,48,1223	0/0:39,0:38:67.24:0,67,1168	0/0:21,0:21:45.13:0,45,850	0/0:24,0:24:66.22:0,66,1197	0/0:33,0:33:81.25:0,81,1577	0/0:23,0:23:61.94:0,62,1450	0/0:25,0:25:69.22:0,69,1168	0/1:17,0:17:31.90:32,0,848	0/0:18,0:17:39.11:0,39,1038
chr10	85347504	.	CT	C	2642.77	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.725;DP=572;FS=0.994;HRun=1;HaplotypeScore=57.0942;InbreedingCoeff=0.9997;MQ=81.39;MQ0=0;MQRankSum=0.235;QD=36.71;ReadPosRankSum=1.481;VQSLOD=3.8547;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1629	0/0:10,0:10:30.10:0,30,468	0/0:15,0:15:42.08:0,42,601	0/0:16,0:16:41.38:0,41,473	0/0:27,0:27:81.24:0,81,1234	0/0:15,0:15:45.14:0,45,695	1/1:0,24:24:63.21:874,63,0	0/0:26,0:26:50.65:0,51,1170	0/0:19,0:19:57.18:0,57,886	0/0:11,0:11:33.10:0,33,505	0/0:20,0:20:60.19:0,60,925	1/1:0,14:14:42.14:587,42,0	1/1:0,16:16:45.15:629,45,0	1/1:0,18:18:51.17:713,51,0	0/0:21,0:21:63.16:0,63,915	0/0:12,0:12:36.12:0,36,575	0/0:26,0:26:75.21:0,75,1169	0/0:36,0:36:99:0,108,1691	0/0:18,0:18:51.17:0,51,800	0/0:18,0:18:54.17:0,54,841	0/0:33,0:33:99:0,99,1557	0/0:14,0:14:42.14:0,42,661	0/0:23,0:23:69.22:0,69,1069	0/0:31,0:30:93.32:0,93,1487	0/0:18,0:18:54.18:0,54,863	0/0:15,0:15:45.15:0,45,718	0/0:24,0:24:72.25:0,72,1150	0/0:18,0:18:54.10:0,54,752
chr10	85347614	.	C	CTT	6728.39	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-10.595;DP=573;FS=4.303;HRun=6;HaplotypeScore=91.8231;InbreedingCoeff=0.9912;MQ=71.67;MQ0=2;MQRankSum=1.020;QD=35.23;ReadPosRankSum=-0.993;VQSLOD=4.3883;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:78.23:0,78,951	0/0:7,0:7:20.90:0,21,159	0/0:15,0:12:10.25:0,10,104	0/0:12,0:12:27.04:0,27,293	0/0:30,0:30:84.23:0,84,1001	0/0:25,0:25:69.21:0,69,842	0/0:17,0:18:47.52:0,48,501	1/1:3,14:17:39.13:645,39,0	0/0:14,0:14:36.10:0,36,439	0/0:25,0:25:62.96:0,63,565	0/0:23,0:23:59.83:0,60,502	0/0:20,0:20:51.09:0,51,599	0/0:24,0:24:63.16:0,63,753	0/0:11,0:11:30.02:0,30,346	1/1:17,0:17:27.07:293,27,0	1/1:19,0:20:47.40:480,47,0	0/0:23,0:23:53.89:0,54,447	0/0:27,0:27:55.96:0,56,379	1/1:6,20:28:69.22:1087,69,0	1/1:2,28:30:84.24:1388,84,0	1/1:2,11:13:27.09:457,27,0	0/0:14,0:14:27.05:0,27,305	0/0:22,0:22:66.10:0,66,760	0/0:13,0:13:36.11:0,36,438	0/0:25,0:25:75.23:0,75,909	1/1:3,19:23:23.58:873,24,0	1/1:2,19:21:39.13:659,39,0	1/1:4,16:20:51.17:846,51,0
chr10	85347620	.	T	TA	2394.61	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-5.552;DP=573;FS=6.494;HRun=10;HaplotypeScore=92.2775;InbreedingCoeff=0.6116;MQ=73.71;MQ0=2;MQRankSum=1.900;QD=11.24;ReadPosRankSum=0.696;VQSLOD=3.1008;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:83.81:0,84,675	1/1:0,7:7:21.05:222,21,0	0/0:19,0:16:19.34:0,19,137	0/1:16,0:15:6.44:6,0,114	0/0:32,0:32:83.81:0,84,679	0/0:25,0:25:74.89:0,75,610	0/1:18,0:17:12.12:12,0,65	0/0:14,0:14:27.36:0,27,136	0/0:14,0:14:38.93:0,39,315	1/1:5,21:26:63.06:622,63,0	1/1:3,18:21:51.13:539,51,0	0/1:22,0:22:11.87:12,0,79	0/1:27,0:27:78.85:79,0,87	0/1:12,0:12:4.11:4,0,39	1/1:0,0:17:26.77:185,27,0	1/1:1,1:24:47.29:339,47,0	1/1:2,20:23:54.13:568,54,0	0/0:26,0:26:62.58:0,63,503	0/0:16,0:17:11.38:0,11,124	0/0:33,0:33:73.31:0,73,337	0/0:12,0:12:26.57:0,27,114	0/0:12,0:12:20.91:0,21,163	0/0:24,0:24:53.90:0,54,441	0/0:13,0:13:32.95:0,33,269	0/0:25,0:25:59.91:0,60,492	0/0:20,0:20:43.20:0,43,212	0/0:22,0:22:41.50:0,41,196	0/0:19,0:18:26.98:0,27,124
chr10	85348329	.	A	AT	8462.23	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=1.627;DP=545;FS=2.013;HRun=8;HaplotypeScore=66.1069;InbreedingCoeff=0.9588;MQ=73.14;MQ0=0;MQRankSum=0.706;QD=26.12;ReadPosRankSum=0.216;VQSLOD=5.5481;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,27:33:72.21:831,72,0	1/1:0,11:11:33.01:363,33,0	0/0:8,0:8:10.96:0,11,89	0/0:14,0:14:14.62:0,15,97	0/0:27,0:27:69:0,69,623	0/0:26,0:26:66.01:0,66,599	0/0:17,0:17:42:0,42,379	1/1:6,23:29:66.16:731,66,0	0/0:20,0:20:51.01:0,51,462	1/1:3,22:25:66.20:762,66,0	1/1:1,14:15:39.12:449,39,0	0/0:13,0:13:33:0,33,298	0/0:21,0:21:57.03:0,57,522	0/0:22,0:22:57.01:0,57,517	1/1:3,0:16:31.41:174,31,0	1/1:2,0:17:37.13:204,37,0	1/1:2,21:23:54.16:623,54,0	1/1:3,20:23:60.18:692,60,0	1/1:7,25:32:1.83:772,2,0	1/1:2,21:23:60.18:692,60,0	1/1:1,16:17:45.13:519,45,0	0/0:10,0:10:30.02:0,30,275	0/0:13,0:13:33.02:0,33,302	0/0:8,0:8:21.01:0,21,192	0/0:21,0:21:57.02:0,57,516	1/1:5,17:22:51.13:577,51,0	1/1:3,30:32:81.24:934,81,0	1/1:0,5:5:12.04:138,12,0
chr10	85348551	.	G	GA	5053.17	PASS	AB=0.944;AC=15;AF=0.268;AN=56;BaseQRankSum=-14.906;DP=658;FS=38.449;HRun=9;HaplotypeScore=86.5523;InbreedingCoeff=0.9032;MQ=69.61;MQ0=0;MQRankSum=-0.730;QD=24.41;ReadPosRankSum=-1.103;VQSLOD=2.5655;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:98.95:0,99,853	0/0:8,0:8:20.97:0,21,179	0/0:17,0:12:13.37:0,13,160	0/1:16,0:14:32.12:32,0,40	0/0:33,0:33:92.95:0,93,800	0/0:16,0:16:44.99:0,45,390	0/0:16,0:16:47.99:0,48,417	1/1:4,25:29:75.15:801,75,0	0/0:28,0:28:46.48:0,46,612	0/0:26,0:26:68.97:0,69,596	0/0:23,0:23:59.98:0,60,520	0/0:22,0:22:59.98:0,60,520	0/0:35,0:35:95.93:0,96,823	0/0:21,0:21:49.59:0,50,440	0/0:15,0:15:38.98:0,39,338	0/0:35,0:35:92.96:0,93,803	0/0:32,0:32:89.97:0,90,781	0/0:1,0:15:22.41:0,22,66	1/1:4,24:28:52.11:774,52,0	1/1:2,24:26:69.19:761,69,0	1/1:3,21:24:41.95:446,42,0	0/0:12,0:12:32.17:0,32,261	0/0:21,0:21:29.50:0,30,413	0/0:22,0:22:65.99:0,66,573	0/0:19,0:19:50.96:0,51,438	1/1:4,26:30:78.21:862,78,0	1/1:6,29:36:64.08:905,64,0	1/1:3,14:17:22.09:471,22,0
chr10	85349230	.	GTT	G	3070.22	PASS	AB=0.824;AC=36;AF=0.643;AN=56;BaseQRankSum=10.799;DP=495;FS=0.901;HRun=14;HaplotypeScore=126.8075;InbreedingCoeff=0.8221;MQ=58.34;MQ0=6;MQRankSum=-7.827;QD=9.48;ReadPosRankSum=3.485;VQSLOD=2.1422;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:21:16.54:17,0,90	1/1:4,0:8:15.67:65,16,0	0/0:32,0:12:7.83:0,8,63	0/0:25,0:10:11.17:0,11,81	0/0:17,0:19:50.22:0,50,513	0/0:14,0:14:29.55:0,30,349	1/1:3,0:13:24.89:114,25,0	1/1:7,12:20:34.82:298,35,0	0/0:17,0:17:38.93:0,39,444	1/1:3,0:14:16.23:110,16,0	1/1:13,0:19:31.97:125,32,0	1/1:2,0:17:40.57:172,41,0	1/1:5,1:16:32.81:154,33,0	1/1:4,1:16:35.61:165,36,0	1/1:18,0:23:46.03:226,46,0	1/1:11,0:14:25.93:127,26,0	1/1:13,0:20:29.05:116,29,0	1/1:6,0:19:35.12:148,35,0	0/1:12,3:15:11.09:89,0,11	1/1:7,6:15:11.76:235,12,0	1/1:7,8:15:14.94:139,15,0	0/0:12,0:13:28.50:0,29,294	0/0:17,0:17:44.90:0,45,551	0/0:12,0:13:35.09:0,35,424	0/0:19,0:20:37.70:0,38,451	1/1:10,14:22:41.04:374,41,0	1/1:7,15:23:47.73:417,48,0	1/1:1,7:8:21.02:193,21,0
chr10	85349240	.	TTTTTGTTTTTTG	T	5596.92	PASS	AB=0.997;AC=29;AF=0.518;AN=56;BaseQRankSum=9.445;DP=540;FS=10.702;HRun=0;HaplotypeScore=220.3148;InbreedingCoeff=0.1946;MQ=51.88;MQ0=15;MQRankSum=-7.808;QD=13.72;ReadPosRankSum=0.981;VQSLOD=2.4337;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:17:36.03:733,36,0	1/1:4,4:8:18.02:411,18,0	0/1:34,0:8:24.49:24,0,95	0/1:28,0:9:11.67:12,0,90	0/0:22,0:22:63.21:0,63,2288	0/0:14,0:13:38.16:0,38,1390	0/1:13,0:13:3.50:88,0,4	0/1:18,0:18:16.60:17,0,119	0/0:16,0:16:44.36:0,44,1652	1/1:20,0:18:40.10:583,40,0	1/1:13,5:18:45.97:834,46,0	0/1:18,0:17:54.19:97,0,54	1/1:22,0:22:5.90:104,6,0	0/1:14,0:14:25.33:82,0,25	1/1:32,0:32:55.42:697,55,0	1/1:18,0:18:17.47:142,17,0	1/1:26,0:23:41.44:616,41,0	1/1:19,0:19:41.92:677,42,0	0/1:21,0:19:32.01:32,0,109	0/1:16,0:16:99:153,0,130	0/1:13,0:12:22.71:23,0,87	0/0:15,0:15:42.13:0,42,1598	0/0:16,0:16:43.31:0,43,1863	0/0:15,0:15:42.14:0,42,1418	0/0:21,0:21:38.58:0,39,1557	0/1:24,0:21:84.19:84,0,170	0/1:27,0:27:93.71:189,0,94	0/0:13,0:12:1.49:0,1,73
chr10	85349243	.	TTG	T	4590.99	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=12.230;DP=560;FS=13.137;HRun=0;HaplotypeScore=139.4910;InbreedingCoeff=0.6897;MQ=52.97;MQ0=17;MQRankSum=-6.943;QD=10.83;ReadPosRankSum=2.059;VQSLOD=4.1590;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:19:14.49:122,14,0	1/1:9,0:9:20.40:129,20,0	0/1:35,0:7:24.92:45,0,25	0/0:31,0:10:13.06:0,13,72	0/0:22,0:22:54.26:0,54,475	0/0:14,0:13:37.45:0,37,351	1/1:12,0:12:27.62:115,28,0	1/1:19,0:19:41.88:252,42,0	0/0:16,0:16:29.04:0,29,315	1/1:22,0:20:48.12:302,48,0	1/1:18,0:18:33.78:238,34,0	1/1:19,0:18:38.66:178,39,0	1/1:23,0:23:25.62:148,26,0	1/1:14,0:14:39:215,39,0	1/1:24,9:33:72.72:684,73,0	1/1:6,12:18:29.82:324,30,0	1/1:26,0:23:3.54:186,4,0	1/1:24,0:24:43.65:272,44,0	0/1:24,0:21:24.62:230,0,25	1/1:14,2:16:23.03:269,23,0	1/1:11,0:10:13.33:70,13,0	0/1:15,0:15:19.42:19,0,228	0/0:16,0:16:41.54:0,42,492	0/0:16,0:16:31.63:0,32,346	0/0:21,0:21:5.21:0,5,343	1/1:25,0:22:16.57:230,17,0	1/1:27,0:27:60.93:396,61,0	1/1:13,0:12:28.50:168,29,0
chr10	85349244	.	TG	T	3485.06	PASS	AB=0.986;AC=38;AF=0.679;AN=56;BaseQRankSum=10.453;DP=562;FS=29.040;HRun=1;HaplotypeScore=135.2948;InbreedingCoeff=0.3756;MQ=53.09;MQ0=17;MQRankSum=-7.726;QD=7.49;ReadPosRankSum=0.919;VQSLOD=-0.6825;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:20:27.71:150,28,0	1/1:9,0:9:18.10:91,18,0	0/1:32,3:8:14.34:38,0,14	0/0:29,1:9:8.42:0,8,47	0/0:22,0:22:24.43:0,24,285	0/0:14,0:13:26.06:0,26,243	1/1:12,0:12:17.04:51,17,0	1/1:19,0:19:18.83:170,19,0	0/1:17,0:17:15:15,0,156	1/1:21,0:19:43:247,43,0	1/1:18,0:18:30.71:185,31,0	1/1:19,0:18:25.31:93,25,0	1/1:23,0:23:16.98:79,17,0	1/1:14,0:14:31.55:140,32,0	1/1:32,0:33:72.64:551,73,0	1/1:17,1:18:29.89:251,30,0	0/1:25,1:23:3.57:120,0,4	1/1:24,0:24:42.73:260,43,0	0/1:24,0:21:22.12:223,0,22	1/1:16,0:16:19.15:190,19,0	0/1:11,0:10:0.47:24,0,0	0/1:15,0:15:41.19:41,0,130	0/0:15,0:15:42.97:0,43,353	0/0:16,0:16:7.94:0,8,220	0/1:23,0:23:10.74:11,0,259	0/1:26,0:23:12.98:160,0,13	1/1:27,0:27:40.89:271,41,0	1/1:13,0:12:14.34:123,14,0
chr10	85349245	.	GTTTTTTGGTTTTTTT	G	1741.66	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=2.999;DP=566;FS=4.874;HRun=0;HaplotypeScore=265.0102;InbreedingCoeff=0.1986;MQ=51.87;MQ0=18;MQRankSum=-5.429;QD=7.35;ReadPosRankSum=-4.112;VQSLOD=1.7004;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,5:20:38.64:804,39,0	1/1:9,0:9:4.67:201,5,0	0/0:37,0:10:13.54:0,14,118	0/0:26,0:7:3.16:0,3,96	0/0:23,0:23:62.69:0,63,2836	0/0:15,0:14:38.95:0,39,1640	0/0:13,0:13:22.23:0,22,218	0/1:18,0:18:5.41:5,0,267	0/0:18,0:18:48.16:0,48,2078	0/1:23,0:21:20.86:76,0,21	0/1:19,0:19:12.84:254,0,13	0/0:19,0:18:35.28:0,35,369	0/0:23,0:23:22.24:0,22,281	0/0:14,0:14:38.71:0,39,371	0/1:32,0:32:21.09:21,0,377	0/0:18,0:18:29.49:0,29,374	0/1:26,0:23:44.78:45,0,177	1/1:24,0:25:29.78:354,30,0	0/1:22,0:19:11.87:12,0,376	0/1:16,0:16:76.63:77,0,364	0/0:13,0:11:8.70:0,9,186	0/0:15,0:15:41.35:0,41,1970	0/0:14,0:14:42.14:0,42,2146	0/0:16,0:16:30.05:0,30,1443	0/0:22,0:22:39.12:0,39,1791	0/1:25,0:22:59.24:59,0,414	0/0:27,0:27:26.50:0,26,564	0/0:13,0:12:17.30:0,17,255
chr10	85349249	.	TTTGG	T	5897.72	PASS	AB=0.987;AC=40;AF=0.714;AN=56;BaseQRankSum=12.320;DP=567;FS=4.435;HRun=0;HaplotypeScore=150.5039;InbreedingCoeff=0.8118;MQ=51.97;MQ0=19;MQRankSum=-9.201;QD=13.28;ReadPosRankSum=0.132;VQSLOD=3.9409;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,9:21:35.59:395,36,0	1/1:8,0:8:19.05:151,19,0	0/1:35,1:10:23.35:23,0,70	0/1:29,0:7:7.08:7,0,10	0/0:25,0:25:54.63:0,55,837	0/0:17,0:16:44.67:0,45,583	1/1:15,0:15:34.88:299,35,0	1/1:21,0:21:7.06:209,7,0	0/0:18,0:18:40.01:0,40,589	1/1:24,0:22:40.78:218,41,0	1/1:20,0:20:6.73:290,7,0	1/1:20,0:19:41.52:304,42,0	1/1:22,0:22:43.98:377,44,0	1/1:14,0:14:37.99:360,38,0	1/1:14,16:30:62.76:766,63,0	1/1:19,0:19:32.75:327,33,0	1/1:25,0:22:36:182,36,0	1/1:24,0:24:39.02:513,39,0	1/1:19,0:16:34.58:237,35,0	1/1:17,0:17:35.05:289,35,0	1/1:12,0:10:14.60:82,15,0	0/0:15,0:15:18.73:0,19,509	0/0:14,0:14:42.14:0,42,631	0/0:14,0:14:29.95:0,30,475	0/0:20,0:20:39.13:0,39,598	1/1:23,0:20:37.52:280,38,0	1/1:29,0:29:48.29:460,48,0	1/1:13,0:12:16.99:130,17,0
chr10	85349251	.	TGG	T	4419.76	PASS	AB=0.976;AC=37;AF=0.661;AN=56;BaseQRankSum=12.579;DP=553;FS=8.675;HRun=2;HaplotypeScore=135.1792;InbreedingCoeff=0.7587;MQ=51.15;MQ0=19;MQRankSum=-7.793;QD=10.89;ReadPosRankSum=0.412;VQSLOD=1.2072;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:15:26.84:244,27,0	1/1:8,0:8:14.32:92,14,0	0/1:37,1:10:23.62:24,0,78	0/0:25,2:6:1.36:0,1,18	0/0:24,0:24:50.03:0,50,692	0/0:16,0:15:41.71:0,42,508	1/1:15,0:15:34.23:186,34,0	0/1:20,1:21:5.18:153,0,5	0/0:18,0:18:42.15:0,42,407	1/1:23,1:22:31.88:152,32,0	0/1:20,0:20:0.47:156,0,0	1/1:21,0:20:41.30:214,41,0	1/1:22,0:22:42.45:230,42,0	1/1:13,1:14:36.31:235,36,0	1/1:29,1:30:62.74:592,63,0	1/1:16,2:18:32.83:344,33,0	1/1:24,1:22:32.71:130,33,0	1/1:1,22:23:39.10:507,39,0	1/1:17,1:15:35.30:233,35,0	1/1:17,0:17:31.63:210,32,0	1/1:11,0:9:6.75:54,7,0	0/0:15,1:16:26.08:0,26,368	0/0:14,0:14:42.07:0,42,492	0/0:12,0:12:30.03:0,30,378	0/0:20,0:20:39.04:0,39,506	1/1:23,0:20:35.10:206,35,0	1/1:28,1:29:59.24:368,59,0	1/1:13,0:12:15.42:89,15,0
chr10	85349252	.	GGTTTT	G	7058.43	PASS	AB=0.983;AC=35;AF=0.625;AN=56;BaseQRankSum=11.297;DP=552;FS=0.000;HRun=0;HaplotypeScore=150.6386;InbreedingCoeff=0.5469;MQ=51.33;MQ0=19;MQRankSum=-7.876;QD=17.39;ReadPosRankSum=1.706;VQSLOD=4.5694;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:16:6.41:173,6,0	1/1:8,0:8:0.92:118,1,0	0/1:38,0:10:10.02:10,0,43	0/0:26,0:6:4.39:0,4,30	0/0:24,0:24:56.43:0,56,1172	0/0:16,0:15:45.06:0,45,759	1/1:3,12:15:38.96:625,39,0	0/1:19,1:21:13.76:349,0,14	0/0:17,0:18:43.61:0,44,702	0/1:24,0:22:23.14:64,0,23	0/1:20,0:20:39:148,0,39	1/1:10,11:20:50.75:637,51,0	1/1:4,18:22:44.77:739,45,0	1/1:3,10:13:38.86:643,39,0	1/1:28,1:30:61.87:548,62,0	1/1:18,0:18:32.32:316,32,0	0/1:25,0:22:16.21:16,0,59	1/1:23,0:23:34.94:243,35,0	1/1:17,0:16:36.72:349,37,0	1/1:13,0:17:47.43:452,47,0	1/1:11,0:10:15.28:173,15,0	0/0:16,0:16:5.96:0,6,696	0/0:13,0:14:42.08:0,42,775	0/0:12,0:12:30.05:0,30,566	0/0:20,0:20:38.98:0,39,726	1/1:21,0:20:59.31:529,59,0	1/1:25,0:29:58.98:665,59,0	1/1:11,0:10:26.88:262,27,0
chr10	85349260	.	T	TG	357.39	PASS	AB=0.897;AC=5;AF=0.089;AN=56;BaseQRankSum=1.955;DP=540;FS=2.541;HRun=0;HaplotypeScore=134.4408;InbreedingCoeff=0.0582;MQ=51.61;MQ0=19;MQRankSum=-0.853;QD=3.97;ReadPosRankSum=2.201;VQSLOD=3.5638;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:15:0.94:59,0,1	0/1:5,4:9:16.53:86,0,17	0/0:38,0:7:4.40:0,4,52	0/0:31,0:7:9.71:0,10,48	0/0:25,0:25:70.70:0,71,591	0/0:13,0:12:36.05:0,36,360	0/0:14,0:14:22.10:0,22,109	0/0:18,0:18:42.07:0,42,352	0/0:17,0:17:43.87:0,44,356	0/1:23,0:21:99:190,0,106	0/1:14,5:19:44.34:94,0,44	0/0:19,0:18:11.37:0,11,96	0/0:22,0:22:37.36:0,37,165	0/0:15,0:15:36.58:0,37,177	0/0:32,0:32:53.39:0,53,430	0/0:19,0:19:38.75:0,39,293	0/1:23,0:20:45.90:46,0,131	0/0:22,0:22:25.02:0,25,112	0/0:19,0:16:37.29:0,37,293	0/0:17,0:17:37.29:0,37,297	0/0:12,0:10:21.04:0,21,177	0/0:15,0:15:44.19:0,44,402	0/0:13,0:13:37.52:0,38,299	0/0:11,0:11:27.04:0,27,273	0/0:18,0:18:32.97:0,33,305	0/0:21,0:19:38.83:0,39,364	0/0:29,0:29:68.08:0,68,489	0/0:10,0:9:22.46:0,22,168
chr10	85350007	.	TTGTGCCTA	T	7436.51	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.737;DP=609;FS=5.161;HRun=0;HaplotypeScore=163.5682;InbreedingCoeff=0.9963;MQ=86.48;MQ0=0;MQRankSum=-13.923;QD=58.10;ReadPosRankSum=1.649;VQSLOD=4.5048;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,12:16:30.10:838,30,0	1/1:2,6:8:18.02:439,18,0	0/0:26,0:26:78.26:0,78,2806	0/0:20,0:20:57.16:0,57,2160	0/0:26,0:26:72.25:0,72,3120	0/0:31,0:31:90.31:0,90,3858	0/0:24,0:24:72.25:0,72,2866	0/0:29,0:29:75.26:0,75,3183	0/0:21,0:21:57.20:0,57,2395	1/1:4,20:24:57.18:1535,57,0	1/1:3,7:10:18.02:439,18,0	0/0:24,0:24:72.25:0,72,3107	0/0:27,0:27:81.25:0,81,3313	0/0:21,0:21:63.20:0,63,2376	1/1:1,22:23:51.18:1426,51,0	1/1:0,16:16:36.12:997,36,0	1/1:4,9:13:20.98:587,21,0	1/1:1,17:18:42.14:1174,42,0	0/0:21,0:21:60.21:0,60,2589	0/0:23,0:23:57.20:0,57,2472	0/0:25,0:25:69.24:0,69,2918	0/0:24,0:24:66.23:0,66,2707	0/0:23,0:23:54.19:0,54,2250	0/0:16,0:16:28.17:0,28,1819	0/0:23,0:23:63.22:0,63,2658	0/0:23,0:23:63.22:0,63,2761	0/0:30,0:30:90.31:0,90,3806	0/0:24,0:24:72.14:0,72,2874
chr10	85350254	.	AGT	A	6270.40	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.142;DP=597;FS=0.730;HRun=0;HaplotypeScore=95.6749;InbreedingCoeff=0.9563;MQ=70.23;MQ0=2;MQRankSum=-11.901;QD=36.46;ReadPosRankSum=-4.172;VQSLOD=5.3001;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,28:31:78.21:1111,78,0	1/1:1,5:6:15.05:220,15,0	0/0:7,0:7:17.92:0,18,260	0/0:16,0:16:32.08:0,32,583	0/0:26,0:26:75.26:0,75,1402	0/0:25,0:25:72.23:0,72,1316	0/0:26,0:26:75.26:0,75,1402	0/0:22,0:22:57.19:0,57,1031	0/0:15,0:15:39.12:0,39,689	1/1:1,19:19:57.15:814,57,0	1/1:0,25:25:60.04:872,60,0	0/0:23,0:23:66.23:0,66,1229	0/0:25,0:25:75.24:0,75,1372	0/0:23,0:23:69.24:0,69,1282	1/1:2,28:29:84.27:1201,84,0	1/1:4,18:22:1.02:731,1,0	1/1:5,18:23:54.13:768,54,0	1/1:2,12:13:39.11:553,39,0	0/0:11,0:11:30.06:0,30,497	0/0:23,0:23:63.22:0,63,1179	0/0:49,0:49:99:0,141,2615	0/0:14,0:14:39.13:0,39,724	0/0:16,0:16:48.16:0,48,893	0/0:30,0:30:84.27:0,84,1517	0/0:20,0:20:60.21:0,60,1104	0/0:17,0:17:48.16:0,48,899	0/0:25,0:25:72.21:0,72,1251	0/0:12,0:12:30.10:0,30,561
chr10	85350283	.	CT	C	4985.81	PASS	AB=0.864;AC=17;AF=0.304;AN=56;BaseQRankSum=14.248;DP=505;FS=14.380;HRun=1;HaplotypeScore=76.9492;InbreedingCoeff=0.8815;MQ=79.67;MQ0=0;MQRankSum=-15.668;QD=32.59;ReadPosRankSum=-1.642;VQSLOD=2.9308;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:60.15:788,60,0	1/1:0,4:4:12.04:157,12,0	0/0:11,0:11:33.11:0,33,509	0/0:21,0:21:60.19:0,60,908	0/0:15,0:14:42.11:0,42,644	0/0:17,0:17:51.17:0,51,815	0/0:18,0:18:54.17:0,54,839	0/0:17,0:17:51.15:0,51,770	0/0:14,0:14:42.14:0,42,671	1/1:1,22:22:66.21:890,66,0	1/1:1,17:18:51.08:648,51,0	0/0:18,0:18:54.17:0,54,840	0/0:20,0:20:60.20:0,60,958	0/0:17,0:17:51.17:0,51,814	1/1:1,24:24:72.03:910,72,0	1/1:1,17:18:3.21:586,3,0	1/1:0,13:13:36.11:479,36,0	1/1:0,11:11:33.11:459,33,0	0/0:20,0:20:60.20:0,60,952	0/0:16,0:16:48.16:0,48,764	0/0:37,0:37:99:0,105,1675	0/0:14,0:14:39.13:0,39,621	0/0:17,0:17:51.17:0,51,815	0/0:27,0:27:78.25:0,78,1219	0/0:21,0:21:63.21:0,63,1005	0/1:16,3:19:67.21:67,0,703	0/0:20,0:20:57.19:0,57,911	0/0:12,0:12:30.10:0,30,479
chr10	85350623	.	G	GAGAA	627.56	PASS	AB=0.859;AC=11;AF=0.196;AN=56;BaseQRankSum=6.472;DP=593;FS=5.741;HRun=0;HaplotypeScore=92.9831;InbreedingCoeff=0.0107;MQ=49.23;MQ0=31;MQRankSum=1.367;QD=2.88;ReadPosRankSum=6.080;VQSLOD=0.7726;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:23:6.73:0,7,256	0/0:9,0:9:11.49:0,11,98	0/0:18,0:5:8.26:0,8,84	0/0:25,0:8:17.98:0,18,171	0/0:21,0:20:29.95:0,30,245	0/0:19,0:18:38.95:0,39,351	0/1:9,0:25:75.71:79,0,76	0/0:30,0:29:75.79:0,76,589	0/0:15,0:15:41.98:0,42,441	0/0:19,0:18:43.92:0,44,301	0/1:18,0:16:10.26:10,0,78	1/1:2,22:24:9.03:240,9,0	0/1:7,12:23:42.35:115,0,42	0/1:3,13:20:1.93:172,0,2	0/0:34,0:33:46.46:0,46,373	0/1:18,0:17:31.59:32,0,219	0/0:31,0:30:15.31:0,15,372	0/0:17,0:17:31.22:0,31,337	0/1:20,0:20:45.18:45,0,272	0/1:19,0:17:18.37:18,0,129	0/1:25,0:23:11.18:11,0,209	0/0:11,0:11:14.99:0,15,155	0/0:18,0:18:26.04:0,26,242	0/0:26,0:26:59.68:0,60,528	0/0:19,0:18:35.92:0,36,294	0/0:24,0:23:7.42:0,7,408	0/1:22,0:16:53.43:53,0,140	0/0:12,0:10:16.15:0,16,114
chr10	85352105	.	TA	T	6144.83	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-0.173;DP=570;FS=3.903;HRun=9;HaplotypeScore=70.1925;InbreedingCoeff=0.9804;MQ=76.70;MQ0=0;MQRankSum=-0.011;QD=22.10;ReadPosRankSum=1.820;VQSLOD=5.9167;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:42:96.76:0,97,527	0/0:0,0:4:11.36:0,11,58	0/0:11,0:11:10.13:0,10,174	0/0:13,1:12:9.27:0,9,75	0/0:32,0:32:90.23:0,90,1008	0/0:28,1:29:53.87:0,54,872	1/1:1,15:16:45.02:412,45,0	1/1:3,16:19:47.96:423,48,0	0/0:13,0:13:33.10:0,33,381	0/0:3,0:23:63.05:0,63,341	0/0:4,0:24:51.60:0,52,261	1/1:2,13:15:39.01:357,39,0	1/1:1,16:17:45.02:412,45,0	1/1:5,28:33:78.03:714,78,0	1/1:1,22:23:57.03:522,57,0	1/1:3,12:15:33.02:302,33,0	0/0:2,0:19:42.61:0,43,217	0/0:3,0:15:31.25:0,31,159	1/1:5,17:22:50.99:461,51,0	1/1:3,28:31:80.96:731,81,0	1/1:0,18:18:45.02:412,45,0	0/0:17,0:17:21.14:0,21,492	0/0:21,0:21:57.17:0,57,658	0/0:13,0:13:36.09:0,36,404	0/0:15,0:15:45.13:0,45,518	1/1:5,25:30:47.83:632,48,0	1/1:7,20:27:51.01:467,51,0	1/1:0,12:12:33.02:302,33,0
chr10	85352198	.	CTCCATG	C	4273.13	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.633;DP=662;FS=6.455;HRun=0;HaplotypeScore=133.7613;InbreedingCoeff=0.9998;MQ=90.88;MQ0=0;MQRankSum=-12.292;QD=58.54;ReadPosRankSum=1.039;VQSLOD=4.5543;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.25:0,72,2595	0/0:16,0:16:48.16:0,48,1722	0/0:29,0:29:81.28:0,81,2585	0/0:25,0:25:60.42:0,60,2329	0/0:27,0:27:78.26:0,78,2605	0/0:28,0:28:84.25:0,84,2801	1/1:1,12:13:30.10:681,30,0	0/0:33,0:33:90.31:0,90,3121	0/0:18,0:18:48.16:0,48,1664	0/0:22,0:22:59.48:0,59,2102	0/0:25,0:25:72.25:0,72,2595	1/1:1,21:22:63.20:1466,63,0	1/1:2,14:16:42.14:975,42,0	1/1:2,20:22:48.16:1150,48,0	0/0:26,0:26:75.26:0,75,2692	0/0:26,0:26:78.27:0,78,2807	0/0:32,0:32:93.32:0,93,3353	0/0:15,0:15:42.14:0,42,1514	0/0:17,0:17:51.18:0,51,1818	0/0:33,0:33:96.33:0,96,3432	0/0:28,0:28:84.29:0,84,2983	0/0:18,0:18:51.18:0,51,1832	0/0:31,0:31:93.31:0,93,3261	0/0:13,0:13:39.13:0,39,1384	0/0:18,0:18:51.18:0,51,1832	0/0:28,0:28:84.29:0,84,2960	0/0:28,0:28:75.26:0,75,2694	0/0:25,0:25:75.26:0,75,2689
chr10	85354176	.	T	TCC	2993.31	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-9.638;DP=560;FS=1.002;HRun=7;HaplotypeScore=92.7418;InbreedingCoeff=0.8667;MQ=83.17;MQ0=0;MQRankSum=-1.027;QD=27.46;ReadPosRankSum=0.759;VQSLOD=3.3764;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:78.16:0,78,874	0/0:15,0:15:45.13:0,45,523	0/0:25,0:25:37.40:0,37,540	0/1:23,0:21:25.01:25,0,212	0/0:21,0:21:51.14:0,51,589	0/0:14,0:14:42.12:0,42,488	1/1:1,23:24:63.22:1034,63,0	0/0:21,0:21:45.09:0,45,503	0/0:22,0:22:60.13:0,60,676	0/0:16,0:16:45.12:0,45,522	0/0:16,0:16:45.12:0,45,511	1/1:1,22:23:45.15:739,45,0	1/1:1,18:19:42.14:689,42,0	1/1:3,17:20:42.14:672,42,0	0/0:21,0:21:57.14:0,57,642	0/0:19,0:19:57.16:0,57,654	0/0:31,0:31:81.15:0,81,904	0/0:18,0:18:54.12:0,54,614	0/0:11,0:11:27.08:0,27,314	0/0:23,0:23:57.15:0,57,651	0/0:22,0:22:60.17:0,60,698	0/0:13,0:13:36.10:0,36,418	0/0:18,0:18:48.12:0,48,548	0/0:21,0:21:51.09:0,51,578	0/0:24,0:24:63.17:0,63,731	0/0:16,0:16:42.12:0,42,487	0/0:20,0:20:51.14:0,51,593	0/0:7,0:7:21.06:0,21,243
chr10	85354205	.	TTC	T	977.61	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.885;DP=617;FS=0.000;HRun=0;HaplotypeScore=103.4383;InbreedingCoeff=0.9483;MQ=77.76;MQ0=0;MQRankSum=-3.168;QD=17.46;ReadPosRankSum=3.404;VQSLOD=3.5397;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,29:36:57.14:714,57,0	0/0:14,0:14:6.48:0,6,426	0/0:32,0:31:28.12:0,28,958	0/0:39,0:34:54.89:0,55,951	0/0:18,0:18:48.14:0,48,755	0/0:19,0:19:54.17:0,54,875	0/0:28,1:29:42.71:0,43,1264	0/0:21,0:21:54.17:0,54,861	0/0:23,0:23:57.19:0,57,939	0/0:21,0:21:63.21:0,63,1029	0/0:21,0:21:57.18:0,57,936	0/0:18,0:18:45.15:0,45,759	0/0:21,0:21:54.17:0,54,871	0/0:19,0:19:45.15:0,45,753	0/0:23,0:23:66.20:0,66,1052	0/0:18,0:18:48.15:0,48,776	0/0:25,0:25:63.22:0,63,1063	1/1:5,15:20:30.10:385,30,0	0/0:16,0:16:42.11:0,42,664	0/0:18,1:19:18.59:0,19,866	0/0:27,0:27:75.22:0,75,1192	0/0:17,0:17:51.17:0,51,843	0/0:23,0:23:60.21:0,60,999	0/0:17,0:17:42.14:0,42,694	0/0:25,0:25:72.23:0,72,1182	0/0:23,0:23:63.21:0,63,1034	0/0:23,0:23:69.22:0,69,1132	0/0:10,0:10:30.08:0,30,464
chr10	85354719	.	GT	G	2011.42	PASS	AB=0.941;AC=11;AF=0.196;AN=56;BaseQRankSum=10.135;DP=643;FS=0.000;HRun=10;HaplotypeScore=68.6602;InbreedingCoeff=0.8802;MQ=77.77;MQ0=0;MQRankSum=0.547;QD=16.49;ReadPosRankSum=0.494;VQSLOD=4.0516;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:27:43.14:0,43,704	0/0:7,0:7:18.04:0,18,191	0/1:15,1:15:17.64:18,0,159	0/0:18,0:18:23.04:0,23,252	0/0:33,0:35:89.74:0,90,912	0/0:19,1:20:47.18:0,47,551	1/1:3,14:17:32.99:286,33,0	0/0:37,0:37:81.20:0,81,876	0/0:20,0:20:50.83:0,51,517	0/0:29,2:33:19.54:0,20,744	0/0:25,0:26:65.93:0,66,679	1/1:0,17:17:35.99:312,36,0	1/1:1,26:27:68.98:599,69,0	1/1:1,19:21:39.63:428,40,0	0/0:21,0:21:60.12:0,60,638	0/0:17,0:19:47.78:0,48,484	0/0:25,0:25:63.12:0,63,683	1/1:2,22:24:62.98:547,63,0	0/0:22,0:22:51.11:0,51,544	0/0:23,0:23:48.35:0,48,612	0/0:13,0:13:30.08:0,30,332	0/0:22,0:22:60.07:0,60,617	0/0:19,0:19:54.15:0,54,597	0/0:12,2:14:13.06:0,13,355	0/0:24,0:24:35.79:0,36,582	0/0:37,0:36:99:0,102,1113	0/0:35,3:38:53.20:0,53,1041	0/0:21,0:21:63.08:0,63,663
chr10	85355389	.	C	CG	8210.92	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=1.941;DP=682;FS=7.027;HRun=3;HaplotypeScore=99.1406;InbreedingCoeff=0.9996;MQ=83.73;MQ0=0;MQRankSum=-9.201;QD=36.82;ReadPosRankSum=-0.614;VQSLOD=4.2960;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,1425	0/0:9,0:9:24.07:0,24,288	0/0:28,0:28:78.03:0,78,889	0/0:17,0:17:51.12:0,51,590	0/0:28,0:28:78.24:0,78,934	0/0:28,0:28:84.23:0,84,983	0/0:17,0:17:39.10:0,39,455	1/1:14,27:41:99:1528,114,0	0/0:27,0:27:63.19:0,63,755	0/0:24,0:24:69.21:0,69,827	0/0:25,0:25:60.17:0,60,707	0/0:19,0:19:51.15:0,51,611	0/0:24,0:24:57.17:0,57,682	0/0:23,0:23:59.92:0,60,669	1/1:2,25:27:81.25:1096,81,0	1/1:0,11:11:33.07:437,33,0	0/0:29,0:29:75.23:0,75,895	0/0:21,0:21:54.17:0,54,648	1/1:7,15:22:57.18:777,57,0	1/1:3,27:30:84.24:1118,84,0	1/1:4,18:22:45.15:627,45,0	0/0:18,0:18:45.12:0,45,528	0/0:25,0:25:75.22:0,75,887	0/0:26,0:26:78.24:0,78,933	0/0:27,0:27:69.21:0,69,828	1/1:2,25:27:42.25:1012,42,0	1/1:5,27:32:87.22:1155,87,0	1/1:0,11:11:33.11:460,33,0
chr10	85355419	.	GA	G	12837.66	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=15.186;DP=699;FS=1.780;HRun=7;HaplotypeScore=91.3407;InbreedingCoeff=0.9990;MQ=80.94;MQ0=0;MQRankSum=-6.121;QD=26.97;ReadPosRankSum=0.801;VQSLOD=5.2279;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:39:99:1132,111,0	1/1:1,8:9:21.05:214,21,0	0/0:27,1:28:26.63:0,27,613	0/0:13,0:13:30.08:0,30,351	0/0:30,0:30:81.24:0,81,997	0/0:31,0:31:87.26:0,87,1077	1/1:1,17:18:42.10:429,42,0	1/1:4,28:32:90.19:913,90,0	0/0:27,0:27:72.23:0,72,906	1/1:1,29:30:81.18:826,81,0	1/1:0,21:21:63.14:642,63,0	1/1:2,27:29:81.18:826,81,0	1/1:1,29:30:78.18:796,78,0	1/1:2,23:25:66.15:673,66,0	1/1:1,30:31:93.21:945,93,0	1/1:1,13:14:36.08:366,36,0	1/1:1,23:24:60.13:612,60,0	1/1:3,19:22:51.11:520,51,0	1/1:4,14:18:45.07:450,45,0	1/1:3,31:34:87.17:879,87,0	1/1:2,19:21:39.08:395,39,0	0/0:15,0:15:42.13:0,42,528	0/0:24,0:24:66.21:0,66,829	0/0:33,0:33:93.30:0,93,1169	0/0:22,0:22:63.20:0,63,782	1/1:4,23:27:72.15:729,72,0	1/1:3,36:39:99:1123,111,0	1/1:1,12:13:36.08:367,36,0
chr10	85355702	.	T	TA	9135.94	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-9.257;DP=583;FS=2.870;HRun=8;HaplotypeScore=61.1319;InbreedingCoeff=0.9925;MQ=64.24;MQ0=0;MQRankSum=0.352;QD=25.03;ReadPosRankSum=-0.248;VQSLOD=5.4794;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,955	1/1:1,8:9:24.07:277,24,0	0/0:7,0:7:14.99:0,15,134	0/0:7,0:7:17.88:0,18,144	0/0:30,0:30:75.01:0,75,682	0/0:20,0:20:54.03:0,54,494	1/1:4,0:20:42.35:214,42,0	1/1:3,20:23:60.12:656,60,0	0/0:7,0:7:15:0,15,137	1/1:3,24:27:72.21:831,72,0	1/1:5,17:22:51.15:589,51,0	1/1:1,0:13:25.57:130,26,0	1/1:3,0:15:22.34:151,22,0	1/1:4,0:15:22.73:115,23,0	1/1:3,14:17:36.11:415,36,0	1/1:2,14:16:45.13:512,45,0	1/1:1,25:26:75.22:865,75,0	1/1:4,21:25:54.16:623,54,0	1/1:6,19:25:63.14:688,63,0	1/1:6,28:34:84.12:925,84,0	1/1:1,18:19:45.13:519,45,0	0/0:19,0:19:45.01:0,45,411	0/0:28,0:28:69:0,69,624	0/0:34,0:34:99:0,102,934	0/0:29,0:29:78.03:0,78,714	1/1:2,21:23:63.19:726,63,0	1/1:4,19:23:48.14:554,48,0	1/1:0,13:13:30.09:346,30,0
chr10	85356263	.	C	CT	3917.40	PASS	AB=0.792;AC=32;AF=0.571;AN=56;BaseQRankSum=-0.260;DP=598;FS=2.343;HRun=14;HaplotypeScore=88.4745;InbreedingCoeff=0.2529;MQ=79.72;MQ0=9;MQRankSum=-2.807;QD=9.44;ReadPosRankSum=-0.837;VQSLOD=2.9716;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:9,17:30:52.23:228,0,52	0/1:2,1:6:4.75:55,0,5	0/0:72,0:31:0.61:0,1,55	0/1:51,0:22:2.39:2,0,40	0/0:20,0:23:50.70:0,51,291	0/0:20,1:25:28.90:0,29,290	1/1:3,11:14:1.73:139,2,0	1/1:18,12:31:2.94:328,3,0	0/0:14,1:18:4.92:0,5,129	1/1:23,0:26:13.80:169,14,0	1/1:11,0:13:23.30:147,23,0	1/1:2,10:12:18:158,18,0	1/1:4,18:22:14.78:132,15,0	0/1:12,7:21:0.50:310,0,0	1/1:12,11:24:21.22:408,21,0	1/1:12,5:17:41.98:365,42,0	1/1:11,0:19:38.65:193,39,0	0/1:10,11:23:71.26:98,0,71	1/1:9,7:16:9.14:193,9,0	0/1:13,9:23:2.45:337,0,2	1/1:10,1:11:17.92:139,18,0	0/0:9,0:10:16.74:0,17,100	0/0:18,0:19:23.53:0,24,238	0/1:6,1:9:33.42:33,0,34	0/0:13,1:16:13.19:0,13,195	0/1:10,2:12:8.54:176,0,9	0/1:19,3:24:39.52:228,0,40	0/1:10,0:10:39.61:80,0,40
chr10	85356283	.	TA	T	3816.41	PASS	AB=0.941;AC=27;AF=0.482;AN=56;BaseQRankSum=5.524;DP=575;FS=2.316;HRun=10;HaplotypeScore=84.6940;InbreedingCoeff=0.8992;MQ=73.65;MQ0=6;MQRankSum=-4.867;QD=13.98;ReadPosRankSum=0.135;VQSLOD=3.9132;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:54.58:0,55,573	1/1:2,5:7:14.99:130,15,0	0/1:45,2:20:8.18:8,0,104	0/0:40,0:18:16.34:0,16,121	0/0:24,0:24:54.11:0,54,568	0/0:26,1:27:46.11:0,46,715	0/0:17,0:17:36.08:0,36,389	1/1:8,19:27:56.92:493,57,0	0/0:13,1:14:1.03:0,1,222	1/1:5,11:16:35.93:305,36,0	1/1:1,12:13:29.97:260,30,0	0/0:15,0:15:33.03:0,33,323	0/0:23,0:23:29.98:0,30,306	0/0:24,0:24:53.72:0,54,533	1/1:14,7:21:26.93:230,27,0	1/1:5,9:14:29.95:255,30,0	1/1:5,16:21:38.95:338,39,0	0/0:21,0:21:36.08:0,36,389	1/1:6,12:18:35.97:312,36,0	1/1:11,12:23:50.93:439,51,0	1/1:2,7:9:14.86:121,15,0	0/0:15,0:16:38.90:0,39,387	0/0:21,0:21:54.15:0,54,597	0/0:8,0:8:21.05:0,21,224	0/0:17,0:17:42.10:0,42,450	1/1:7,7:14:32.98:283,33,0	1/1:11,15:26:41.59:356,42,0	1/1:7,9:16:32.97:286,33,0
chr10	85356660	.	AT	A	3094.76	PASS	AB=0.647;AC=19;AF=0.339;AN=56;BaseQRankSum=9.522;DP=515;FS=3.507;HRun=10;HaplotypeScore=55.4143;InbreedingCoeff=0.9100;MQ=66.79;MQ0=0;MQRankSum=-0.129;QD=17.00;ReadPosRankSum=3.310;VQSLOD=4.1678;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.22:0,87,954	1/1:0,9:9:20.99:182,21,0	0/0:15,0:9:17.77:0,18,147	0/0:12,0:10:10.75:0,11,65	0/0:19,0:20:50.97:0,51,545	0/0:13,0:13:36.09:0,36,391	1/1:4,11:15:23.99:208,24,0	0/0:23,0:23:42.10:0,42,451	0/0:11,0:11:21.05:0,21,225	1/1:3,15:18:44.98:391,45,0	1/1:2,18:20:45.46:391,45,0	1/1:4,16:20:47.97:417,48,0	1/1:1,11:12:21:182,21,0	1/1:3,23:26:32.79:511,33,0	1/1:4,11:15:26.98:234,27,0	0/1:5,6:11:18.32:89,0,18	1/1:5,31:36:80.97:703,81,0	0/0:29,0:29:69.16:0,69,751	0/0:19,0:19:39.09:0,39,421	0/0:22,0:22:51.13:0,51,557	0/0:10,0:10:25.31:0,25,269	0/0:9,0:9:18.05:0,18,199	0/0:18,0:18:39.11:0,39,431	0/0:19,0:19:48.06:0,48,516	0/0:19,1:20:25.08:0,25,505	0/0:29,1:30:52.06:0,52,747	0/0:22,0:23:50.97:0,51,541	0/0:9,0:9:27.07:0,27,298
chr10	85357394	.	GT	G	10353.10	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=9.194;DP=647;FS=2.019;HRun=9;HaplotypeScore=66.9616;InbreedingCoeff=0.9754;MQ=75.61;MQ0=1;MQRankSum=-1.358;QD=22.26;ReadPosRankSum=2.713;VQSLOD=5.8638;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,35:37:99:898,99,0	1/1:3,4:7:12:110,12,0	0/0:16,1:16:5.68:0,6,298	0/0:14,0:13:15.97:0,16,165	0/0:29,0:29:75.17:0,75,827	0/0:19,0:19:57.16:0,57,649	1/1:4,35:39:99:934,102,0	1/1:7,18:25:54.02:494,54,0	0/0:15,0:15:38.77:0,39,411	1/1:4,22:26:66.01:599,66,0	1/1:1,17:18:50.98:458,51,0	1/1:1,17:18:48.03:439,48,0	1/1:5,18:23:51.01:467,51,0	1/1:5,20:25:54.02:494,54,0	1/1:1,19:20:54.03:494,54,0	1/1:4,21:25:54.02:494,54,0	1/1:1,42:43:99:1043,114,0	1/1:3,27:30:72.04:659,72,0	1/1:5,16:21:48.02:439,48,0	1/1:5,20:25:54.92:518,55,0	1/1:4,18:22:36.01:329,36,0	0/0:22,0:22:54.04:0,54,583	0/0:13,0:13:36.09:0,36,406	0/0:26,0:26:60.15:0,60,670	0/0:27,0:27:75.22:0,75,865	1/1:1,22:23:66.04:604,66,0	1/1:2,24:26:66.04:604,66,0	1/1:2,10:12:30.01:275,30,0
chr10	85358558	.	G	GA	12803.53	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-15.889;DP=583;FS=1.465;HRun=5;HaplotypeScore=52.2507;InbreedingCoeff=0.9960;MQ=83.77;MQ0=0;MQRankSum=-2.057;QD=33.61;ReadPosRankSum=-0.149;VQSLOD=5.0416;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:57.19:750,57,0	1/1:0,12:12:33.11:434,33,0	0/0:22,0:22:51.90:0,52,474	0/0:14,0:14:18.12:0,18,252	0/0:36,0:36:99:0,102,1096	0/0:26,0:26:75.19:0,75,806	1/1:2,12:14:36.12:474,36,0	1/1:3,26:29:78.22:984,78,0	0/0:17,0:17:48.12:0,48,516	1/1:3,20:23:60.20:789,60,0	1/1:0,19:19:57.19:750,57,0	1/1:1,19:20:51.17:671,51,0	1/1:3,15:18:45.13:576,45,0	1/1:0,19:19:51.17:671,51,0	1/1:1,25:26:66.21:868,66,0	1/1:1,14:14:39.13:513,39,0	1/1:5,25:30:66.21:869,66,0	1/1:1,25:26:63.20:829,63,0	1/1:2,16:18:54.01:645,54,0	1/1:2,18:20:51.17:670,51,0	1/1:2,10:12:27.09:355,27,0	0/0:22,0:22:63.16:0,63,677	0/0:31,0:31:90.23:0,90,967	0/0:12,0:12:33.08:0,33,354	0/0:22,0:22:66.14:0,66,699	1/1:0,27:27:81.24:1047,81,0	1/1:1,23:24:54.18:711,54,0	1/1:0,5:5:15.05:197,15,0
chr10	85359952	.	G	GC	603.93	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.468;DP=591;FS=15.668;HRun=0;HaplotypeScore=116.6099;InbreedingCoeff=0.8734;MQ=57.13;MQ0=21;MQRankSum=-5.343;QD=17.26;ReadPosRankSum=0.006;VQSLOD=4.8757;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:41.63:0,42,496	0/0:10,0:10:12.04:0,12,164	0/0:33,0:19:33.27:0,33,502	0/0:39,0:13:32.80:0,33,381	0/0:19,0:18:42.07:0,42,557	0/0:16,0:16:39.12:0,39,517	1/1:2,3:3:6.02:90,6,0	0/0:35,0:32:78.87:0,79,1033	0/0:19,0:19:47.25:0,47,605	0/0:39,0:37:99:0,99,1307	0/0:25,0:25:24.61:0,25,370	1/1:1,5:5:9.03:136,9,0	1/1:1,7:7:18.06:255,18,0	1/1:0,6:6:18.06:269,18,0	0/0:21,0:20:18.25:0,18,241	0/0:25,0:25:11.03:0,11,313	0/0:22,0:22:33.55:0,34,458	0/0:18,0:18:27.05:0,27,346	0/0:25,0:24:71.50:0,71,872	0/0:20,0:18:27.69:0,28,374	1/1:10,0:7:1.25:3,1,0	0/0:13,0:13:33.04:0,33,426	0/0:21,0:21:37.05:0,37,481	0/0:32,0:32:93.01:0,93,1141	0/0:8,0:8:21.07:0,21,289	0/0:34,0:32:87.21:0,87,1142	0/0:24,0:22:54.07:0,54,713	0/0:22,0:18:8.24:0,8,83
chr10	85360075	.	TGTGCC	T	3416.45	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.045;DP=675;FS=1.125;HRun=0;HaplotypeScore=188.1558;InbreedingCoeff=0.9952;MQ=92.01;MQ0=1;MQRankSum=-10.534;QD=66.99;ReadPosRankSum=2.801;VQSLOD=4.2332;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,144,4638	0/0:12,0:12:33.11:0,33,1075	0/0:30,0:30:85.18:0,85,2670	0/0:32,0:32:89.22:0,89,2663	0/0:19,0:19:57.20:0,57,1856	0/0:20,0:20:60.21:0,60,1940	1/1:0,9:9:27.09:616,27,0	0/0:23,0:23:69.24:0,69,2074	0/0:25,0:25:72.25:0,72,2386	0/0:17,0:17:51.18:0,51,1698	0/0:20,0:20:60.21:0,60,1851	1/1:0,16:16:48.16:1055,48,0	1/1:1,10:11:33.11:742,33,0	1/1:0,15:15:45.15:1003,45,0	0/0:37,0:36:99:0,102,3382	0/0:31,0:31:87.24:0,87,2767	0/0:32,0:31:81.28:0,81,2689	0/0:6,0:6:15.05:0,15,491	0/0:22,0:22:66.23:0,66,2049	0/0:22,0:22:63.22:0,63,2098	0/0:40,0:40:99:0,105,3484	0/0:20,0:20:60.21:0,60,1990	0/0:33,0:33:96.33:0,96,3179	0/0:29,0:29:87.30:0,87,2842	0/0:19,0:19:57.20:0,57,1862	0/0:37,0:37:99:0,108,3561	0/0:22,0:22:63.22:0,63,2044	0/0:25,0:25:69.22:0,69,2207
chr10	85360085	.	CTA	C	1988.26	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.970;DP=712;FS=0.000;HRun=0;HaplotypeScore=163.8757;InbreedingCoeff=0.9952;MQ=91.25;MQ0=1;MQRankSum=-11.409;QD=37.51;ReadPosRankSum=3.159;VQSLOD=4.4720;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,151,2794	0/0:12,0:12:33.11:0,33,581	0/0:32,0:32:87.27:0,87,1570	0/0:30,0:30:80.73:0,81,1400	0/0:23,0:23:69.22:0,69,1252	0/0:21,0:21:63.20:0,63,1149	1/1:0,9:9:27.09:386,27,0	0/0:25,0:25:66.23:0,66,1212	0/0:26,0:26:72.25:0,72,1347	0/0:20,0:20:60.21:0,60,1124	0/0:21,0:21:63.22:0,63,1171	1/1:1,16:17:44.13:640,44,0	1/1:1,10:11:33.11:461,33,0	1/1:1,15:16:48.16:661,48,0	0/0:36,0:35:99:0,99,1847	0/0:34,0:34:93.32:0,93,1741	0/0:32,0:31:84.29:0,84,1545	0/0:5,0:5:15.05:0,15,268	0/0:21,0:21:60.16:0,60,1047	0/0:29,0:29:81.26:0,81,1485	0/0:49,0:49:99:0,132,2416	0/0:22,0:22:66.23:0,66,1235	0/0:34,0:34:96.33:0,96,1777	0/0:25,0:25:75.24:0,75,1372	0/0:20,0:20:60.21:0,60,1114	0/0:38,0:38:99:0,114,2105	0/0:26,0:26:75.26:0,75,1394	0/0:22,0:22:60.15:0,60,1042
chr10	85360124	.	TCA	T	17248.49	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=2.569;DP=791;FS=3.410;HRun=0;HaplotypeScore=131.5648;InbreedingCoeff=0.9988;MQ=79.10;MQ0=2;MQRankSum=-1.049;QD=38.67;ReadPosRankSum=3.046;VQSLOD=6.4023;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,52:56:99:2020,141,0	1/1:1,11:12:30.57:430,31,0	0/0:29,0:29:87.30:0,87,1550	0/0:30,0:30:78.21:0,78,1329	0/0:26,0:26:75.24:0,75,1335	0/0:24,0:24:66.23:0,66,1209	0/0:22,0:22:54.19:0,54,988	1/1:3,39:42:99:1671,117,0	0/0:29,0:29:81.28:0,81,1462	1/1:1,28:29:84.26:1181,84,0	1/1:2,21:23:57.19:817,57,0	0/0:30,0:30:90.31:0,90,1621	0/0:16,0:16:45.15:0,45,822	0/0:29,0:29:84.29:0,84,1537	1/1:2,30:31:84.28:1203,84,0	1/1:2,32:34:41.31:1277,41,0	1/1:0,26:26:69.23:989,69,0	1/1:1,5:6:18.06:257,18,0	1/1:2,15:17:45.09:599,45,0	1/1:0,30:30:87.29:1239,87,0	1/1:0,55:55:99:2235,157,0	0/0:24,0:24:72.25:0,72,1306	0/0:33,0:33:96.31:0,96,1707	0/0:29,0:29:87.27:0,87,1515	0/0:24,0:24:72.23:0,72,1280	1/1:1,35:36:99:1482,105,0	1/1:2,29:31:81.27:1160,81,0	1/1:0,16:16:48.16:688,48,0
chr10	85361343	.	GC	G	5706.11	PASS	AB=0.689;AC=28;AF=0.519;AN=54;BaseQRankSum=12.753;DP=385;FS=9.331;HRun=2;HaplotypeScore=133.4921;InbreedingCoeff=0.6850;MQ=48.10;MQ0=2;MQRankSum=-11.453;QD=23.78;ReadPosRankSum=0.985;VQSLOD=3.7201;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,18:25:51.02:582,51,0	1/1:0,6:6:18.06:220,18,0	0/1:5,0:2:6.54:7,0,26	./.	0/0:5,0:5:12.04:0,12,180	0/0:7,0:7:18.06:0,18,270	0/0:18,0:18:42.10:0,42,626	1/1:11,20:25:45.14:570,45,0	0/0:20,0:20:60.20:0,60,898	1/1:7,15:21:42.13:522,42,0	1/1:3,9:12:21.06:250,21,0	0/0:16,0:16:39.13:0,39,583	0/0:15,0:15:42.14:0,42,628	0/0:16,0:16:48.14:0,48,697	1/1:6,17:21:51.14:601,51,0	1/1:2,15:15:45.14:553,45,0	0/1:2,14:14:11.87:327,0,12	0/1:2,8:9:18.79:237,0,19	1/1:6,6:12:21.07:264,21,0	1/1:5,12:16:33.10:405,33,0	1/1:3,4:7:9.02:101,9,0	0/0:8,0:8:11.97:0,12,179	0/0:5,0:5:9.01:0,9,135	0/0:23,0:22:63.17:0,63,916	0/0:3,0:3:8.99:0,9,110	1/1:4,16:19:51.16:641,51,0	1/1:3,10:13:30.09:369,30,0	0/1:2,2:4:56.70:57,0,78
chr10	85361348	.	GCAA	G	5036.21	PASS	AB=0.762;AC=28;AF=0.500;AN=56;BaseQRankSum=13.975;DP=329;FS=20.448;HRun=0;HaplotypeScore=139.7081;InbreedingCoeff=0.6832;MQ=50.07;MQ0=2;MQRankSum=-12.289;QD=27.82;ReadPosRankSum=1.644;VQSLOD=3.7768;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:44.99:513,45,0	1/1:0,6:6:17.99:202,18,0	0/1:8,0:3:3.28:3,0,68	0/0:8,0:3:2.97:0,3,20	0/0:9,0:9:15.05:0,15,347	0/0:8,0:8:21.07:0,21,493	0/0:18,0:18:42.14:0,42,1010	1/1:1,15:12:30.10:394,30,0	0/0:20,0:20:57.20:0,57,1404	1/1:1,13:13:39.10:500,39,0	1/1:1,8:9:20.92:203,21,0	0/0:14,0:14:33.11:0,33,793	0/0:14,0:14:33.11:0,33,787	0/0:14,0:14:42.14:0,42,1014	1/1:1,17:16:48.15:578,48,0	1/1:1,14:13:39.11:473,39,0	0/1:1,14:13:40.85:341,0,41	0/1:1,8:8:25.86:228,0,26	1/1:0,6:6:18.06:236,18,0	1/1:1,11:11:32.96:334,33,0	1/1:1,4:5:8.79:52,9,0	0/0:11,0:11:24.03:0,24,511	0/0:5,0:5:9.03:0,9,221	0/0:24,0:23:69.22:0,69,1578	0/0:3,0:3:9.03:0,9,222	1/1:1,16:16:48.15:608,48,0	1/1:0,10:10:27.09:336,27,0	0/1:4,0:4:35.19:35,0,90
chr10	85361352	.	GCGCAAGACC	G	10332.05	PASS	AB=0.682;AC=27;AF=0.482;AN=56;BaseQRankSum=14.107;DP=334;FS=5.459;HRun=0;HaplotypeScore=158.7184;InbreedingCoeff=0.7614;MQ=51.70;MQ0=2;MQRankSum=-12.850;QD=61.87;ReadPosRankSum=3.809;VQSLOD=4.3638;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:39.13:1014,39,0	1/1:0,6:6:18.06:425,18,0	0/0:11,0:5:14.63:0,15,271	0/0:9,0:4:12.04:0,12,319	0/0:10,0:10:24.07:0,24,713	0/0:8,0:8:21.07:0,21,890	0/0:18,0:18:45.04:0,45,1878	1/1:0,15:11:30.10:795,30,0	0/0:21,0:21:63.22:0,63,2970	1/1:1,13:13:39.13:997,39,0	1/1:1,8:9:23.91:445,24,0	0/0:12,0:12:33.11:0,33,1560	0/0:14,0:14:36.12:0,36,1578	0/0:16,0:16:48.15:0,48,2095	1/1:0,17:15:45.15:1162,45,0	1/1:0,14:12:36.12:941,36,0	0/1:1,14:13:45.99:780,0,46	0/1:1,8:8:99:487,0,101	1/1:0,6:6:18.06:477,18,0	1/1:1,11:11:32.98:692,33,0	1/1:0,4:4:9.03:134,9,0	0/0:13,0:13:36.12:0,36,1295	0/0:6,0:6:15.05:0,15,533	0/0:23,0:22:60.21:0,60,2871	0/0:6,0:6:12.51:0,13,443	1/1:0,16:15:45.15:1188,45,0	1/1:0,10:10:30.10:734,30,0	0/1:4,0:4:60.98:61,0,96
chr10	85361387	.	G	GA	2702.11	PASS	AB=0.773;AC=37;AF=0.685;AN=54;BaseQRankSum=4.002;DP=515;FS=5.934;HRun=10;HaplotypeScore=132.7242;InbreedingCoeff=0.7140;MQ=61.28;MQ0=0;MQRankSum=-4.313;QD=7.21;ReadPosRankSum=-5.229;VQSLOD=0.5401;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:31:17.09:99,17,0	1/1:9,0:9:15.74:97,16,0	0/0:20,0:15:32.31:0,32,254	0/0:16,0:13:11.59:0,12,156	0/0:23,0:23:56.89:0,57,462	0/0:11,0:11:26.95:0,27,222	0/1:3,16:19:7.18:342,0,7	1/1:19,0:18:8.44:46,8,0	0/0:17,0:17:41.91:0,42,344	1/1:18,0:17:18.95:118,19,0	1/1:14,0:14:24.49:164,24,0	1/1:7,15:22:8.44:295,8,0	1/1:0,17:17:36.09:383,36,0	1/1:6,15:22:55.97:552,56,0	1/1:24,0:22:4.48:31,4,0	1/1:29,0:25:16.84:73,17,0	1/1:21,0:19:10.16:67,10,0	1/1:10,0:9:11.74:82,12,0	1/1:19,0:19:24.51:148,25,0	1/1:18,0:17:9:72,9,0	1/1:7,0:7:8.01:54,8,0	0/0:18,0:19:46.96:0,47,375	0/1:13,3:16:25.05:25,0,228	0/0:32,1:32:61.32:0,61,707	0/1:12,1:13:0.02:0,0,195	1/1:28,0:26:25.19:162,25,0	1/1:17,0:17:12.13:88,12,0	./.
chr10	85362989	.	AT	A	3146.75	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=10.838;DP=398;FS=5.372;HRun=8;HaplotypeScore=74.8754;InbreedingCoeff=0.8113;MQ=67.40;MQ0=1;MQRankSum=-0.728;QD=9.83;ReadPosRankSum=0.628;VQSLOD=2.0215;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:30.63:135,31,0	1/1:13,0:13:30.49:146,30,0	0/1:10,0:7:6.34:6,0,44	0/1:4,0:4:5.91:6,0,16	0/0:17,0:17:48.12:0,48,556	0/0:22,0:22:60.16:0,60,705	1/1:5,0:5:11.41:63,11,0	1/1:28,1:29:60.80:337,61,0	0/0:11,0:11:33.08:0,33,375	1/1:24,0:24:63.06:375,63,0	1/1:13,0:13:21.86:131,22,0	1/1:11,0:11:24.96:124,25,0	1/1:6,2:8:19.75:101,20,0	1/1:11,0:11:22.03:97,22,0	1/1:13,1:14:23.97:104,24,0	1/1:9,0:9:14.54:61,15,0	1/1:31,0:31:71.08:329,71,0	1/1:21,0:21:41.43:186,41,0	1/1:20,1:21:52.56:263,53,0	1/1:13,0:13:23.79:112,24,0	1/1:9,0:9:19.86:104,20,0	0/0:4,0:4:12.02:0,12,133	0/0:6,0:6:15.03:0,15,170	0/0:2,0:2:3.01:0,3,36	0/0:16,0:15:39.09:0,39,457	1/1:23,1:24:63.82:311,64,0	1/1:22,0:22:48:224,48,0	1/1:12,0:12:27.62:130,28,0
chr10	85363248	.	G	GA	11104.62	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=17.792;DP=663;FS=2.112;HRun=8;HaplotypeScore=116.8385;InbreedingCoeff=0.9903;MQ=78.33;MQ0=0;MQRankSum=-0.480;QD=28.92;ReadPosRankSum=-0.017;VQSLOD=3.2924;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,42:44:92.88:1308,93,0	1/1:0,7:7:21.06:242,21,0	0/0:18,0:18:32.91:0,33,285	0/0:16,0:16:38.95:0,39,343	0/0:29,0:29:84.03:0,84,764	0/0:21,0:21:53.99:0,54,487	0/0:23,0:23:66.03:0,66,604	1/1:3,26:29:78.19:876,78,0	0/0:26,0:26:66.03:0,66,604	1/1:7,22:29:38.72:691,39,0	1/1:1,10:11:30.09:346,30,0	0/0:28,0:28:78.04:0,78,714	0/0:21,0:21:60.03:0,60,549	0/0:29,0:29:81.02:0,81,737	1/1:6,30:36:87.22:989,87,0	1/1:4,27:31:78.23:899,78,0	1/1:1,32:33:87.26:1003,87,0	1/1:0,13:13:36.11:415,36,0	1/1:6,15:21:23.63:499,24,0	1/1:3,11:14:8.60:339,9,0	1/1:4,40:44:99:1350,117,0	0/0:15,0:15:39.02:0,39,356	0/0:18,0:18:54.03:0,54,494	0/0:19,0:19:54.03:0,54,494	0/0:15,0:15:42.02:0,42,384	1/1:9,18:27:60.17:685,60,0	1/1:3,27:30:87.66:976,88,0	1/1:0,14:14:42.12:485,42,0
chr10	85363651	.	TACACACACACACACACACACACACACAC	T	792.91	PASS	AC=8;AF=0.160;AN=50;BaseQRankSum=0.839;DP=440;FS=7.012;HRun=0;HaplotypeScore=267.6493;InbreedingCoeff=0.6620;MQ=70.43;MQ0=18;MQRankSum=-1.372;QD=14.16;ReadPosRankSum=-0.387;VQSLOD=1.1821;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:38:24.06:0,24,1736	0/0:5,0:5:6.02:0,6,196	./.	./.	0/0:9,0:9:12.04:0,12,1043	0/0:18,0:15:9.03:0,9,555	1/1:20,0:19:8.30:43,8,0	0/0:22,0:21:12.04:0,12,633	0/0:13,0:14:12.04:0,12,667	0/0:12,0:11:13.60:0,14,789	0/0:11,0:11:9.03:0,9,802	1/1:10,0:11:3.01:195,3,0	1/1:12,6:18:9.03:641,9,0	1/1:7,0:6:5.93:42,6,0	0/0:10,0:9:18.06:0,18,1576	0/0:5,0:6:6.02:0,6,597	0/0:28,0:30:45.60:0,46,2450	./.	0/0:10,0:8:9.49:0,9,110	0/0:10,0:10:21.07:0,21,1971	0/0:34,0:33:45.15:0,45,3936	0/0:13,0:13:3.01:0,3,281	0/0:15,0:14:12.02:0,12,482	0/0:14,0:14:21.03:0,21,1193	0/0:10,0:14:12.04:0,12,868	0/0:9,0:9:12.04:0,12,1066	0/0:11,0:10:18.06:0,18,1908	0/0:2,0:2:6.02:0,6,675
chr10	85363815	.	CT	C	11822.24	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=15.950;DP=552;FS=3.110;HRun=1;HaplotypeScore=66.3528;InbreedingCoeff=0.9982;MQ=83.22;MQ0=0;MQRankSum=-2.833;QD=39.41;ReadPosRankSum=2.789;VQSLOD=5.6637;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:99:1422,102,0	1/1:0,8:7:21.07:293,21,0	0/0:21,0:21:63.18:0,63,965	0/0:13,0:13:36.12:0,36,541	0/0:26,0:26:78.18:0,78,1127	0/0:23,0:23:66.21:0,66,1029	0/0:24,0:24:72.22:0,72,1103	1/1:0,23:23:66.15:894,66,0	0/0:19,0:19:57.19:0,57,910	1/1:0,21:21:60.20:825,60,0	1/1:1,13:14:42.11:565,42,0	0/0:14,0:14:42.13:0,42,645	0/0:21,0:21:63.21:0,63,989	0/0:13,0:13:39.13:0,39,611	1/1:0,13:13:36.12:503,36,0	1/1:1,16:17:51.17:712,51,0	1/1:1,44:45:99:1730,126,0	1/1:2,27:29:33.38:1018,33,0	1/1:1,12:13:36.12:493,36,0	1/1:2,10:12:36.12:496,36,0	1/1:0,26:26:78.26:1089,78,0	0/0:22,0:22:63.21:0,63,1006	0/0:14,0:14:42.14:0,42,670	0/0:23,0:23:69.24:0,69,1096	0/0:19,0:19:57.16:0,57,864	1/1:0,21:21:63.21:874,63,0	1/1:0,17:17:48.16:656,48,0	1/1:0,6:6:18.06:251,18,0
chr10	85363899	.	A	AT	6907.42	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-0.533;DP=549;FS=0.000;HRun=9;HaplotypeScore=67.0451;InbreedingCoeff=0.9895;MQ=72.49;MQ0=0;MQRankSum=-2.829;QD=26.36;ReadPosRankSum=-0.782;VQSLOD=4.9056;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:65.96:0,66,567	1/1:5,10:14:36.10:398,36,0	0/0:14,0:14:26.71:0,27,209	0/0:12,0:11:21.46:0,21,184	0/0:26,0:26:59.94:0,60,517	0/0:28,0:28:74.98:0,75,651	0/0:24,0:24:65.98:0,66,573	1/1:8,20:29:63.15:681,63,0	0/0:19,0:19:47.97:0,48,413	1/1:4,15:19:50.81:542,51,0	1/1:5,16:21:54.14:591,54,0	0/0:16,0:16:41.98:0,42,362	0/0:24,0:24:62.94:0,63,541	0/0:20,0:20:53.99:0,54,468	1/1:6,9:15:30.07:324,30,0	1/1:2,20:22:57.15:631,57,0	1/1:9,27:36:96.18:1026,96,0	1/1:8,14:22:45.11:489,45,0	1/1:7,11:19:44.94:470,45,0	1/1:2,13:15:16.06:404,16,0	1/1:0,13:13:36.10:398,36,0	0/0:20,0:20:59.97:0,60,517	0/0:22,0:23:62.48:0,62,529	0/0:17,0:17:41.94:0,42,358	0/0:18,0:18:47.96:0,48,411	1/1:6,7:14:32.89:323,33,0	1/1:0,18:17:48.13:531,48,0	1/1:1,3:4:9.02:100,9,0
chr10	85364738	.	CA	C	5373.71	PASS	AB=0.697;AC=30;AF=0.536;AN=56;BaseQRankSum=8.839;DP=517;FS=5.945;HRun=10;HaplotypeScore=63.1126;InbreedingCoeff=0.8667;MQ=76.87;MQ0=1;MQRankSum=-0.263;QD=19.12;ReadPosRankSum=2.213;VQSLOD=5.8759;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:19:32.59:96,33,0	1/1:0,12:12:29.99:260,30,0	0/1:8,2:10:60.15:60,0,87	0/0:15,0:15:25.86:0,26,251	0/0:26,0:26:69.19:0,69,763	0/0:19,0:20:50.97:0,51,545	0/0:21,0:21:57.15:0,57,630	1/1:2,22:24:65.92:560,66,0	0/0:9,0:9:24.06:0,24,266	1/1:2,28:30:61.20:657,61,0	0/1:6,22:28:0.40:455,0,0	0/0:19,0:19:51.14:0,51,562	0/0:19,0:20:53.98:0,54,578	0/0:20,0:20:54.13:0,54,583	1/1:1,20:23:27.88:448,28,0	1/1:0,15:15:44.99:391,45,0	1/1:1,12:13:32.98:287,33,0	1/1:1,11:12:29.99:260,30,0	1/1:5,13:18:5.81:279,6,0	1/1:1,24:25:62.96:547,63,0	1/1:0,13:13:35.99:313,36,0	0/0:27,0:28:75.03:0,75,803	0/0:26,0:26:72.19:0,72,789	0/0:14,0:14:39.11:0,39,431	0/0:18,0:18:51.14:0,51,564	1/1:1,13:14:38.99:339,39,0	1/1:5,15:21:41.02:344,41,0	1/1:0,3:3:9:78,9,0
chr10	85365422	.	TTTTG	T	1821.15	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.175;DP=613;FS=8.660;HRun=0;HaplotypeScore=135.0184;InbreedingCoeff=0.9655;MQ=71.72;MQ0=2;MQRankSum=-7.054;QD=25.65;ReadPosRankSum=0.975;VQSLOD=3.2187;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:66.22:0,66,1480	0/0:6,0:6:15.03:0,15,319	0/0:28,0:25:33.09:0,33,621	0/0:24,0:20:28.83:0,29,584	0/0:28,0:28:54.15:0,54,1202	0/0:18,0:18:48.16:0,48,1125	1/1:0,12:12:18.06:305,18,0	0/0:30,0:30:54.14:0,54,1075	0/0:14,0:14:36.11:0,36,781	0/0:20,0:20:54.18:0,54,1238	0/0:25,0:25:57.16:0,57,1170	1/1:4,18:22:42.14:712,42,0	1/1:5,17:22:36.12:610,36,0	1/1:6,9:15:21.07:352,21,0	0/0:26,0:26:69.22:0,69,1548	0/0:26,0:26:63.18:0,63,1436	0/0:31,0:31:54.17:0,54,1181	0/0:14,0:14:6.70:0,7,426	0/0:29,0:28:54.18:0,54,1258	0/0:20,0:20:42.08:0,42,938	0/0:21,0:21:24.08:0,24,545	0/0:16,0:16:36.11:0,36,771	0/0:17,0:17:39.13:0,39,937	0/0:37,0:37:99:0,102,2505	0/0:13,0:13:30.07:0,30,607	0/0:29,0:29:78.26:0,78,1817	0/0:22,0:21:36.12:0,36,850	0/0:10,0:10:24.08:0,24,585
chr10	85365438	.	G	GT	225.34	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=0.231;DP=581;FS=0.974;HRun=7;HaplotypeScore=125.1769;InbreedingCoeff=0.6626;MQ=55.80;MQ0=5;MQRankSum=0.437;QD=5.78;ReadPosRankSum=1.149;VQSLOD=0.1718;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:72.11:0,72,699	0/0:5,0:5:12.02:0,12,116	0/0:24,0:16:28.97:0,29,323	0/1:29,0:20:2.97:3,0,281	0/0:22,0:22:54.08:0,54,521	0/0:20,0:20:51.07:0,51,492	0/0:14,0:14:19.79:0,20,105	0/0:27,0:27:32.63:0,33,497	0/0:15,0:15:36.05:0,36,347	0/0:23,0:23:66.10:0,66,637	0/0:22,0:22:51.07:0,51,492	0/0:24,0:24:57.15:0,57,352	0/0:18,0:18:36.58:0,37,183	0/0:15,0:16:6.56:0,7,167	0/0:26,0:26:66.11:0,66,652	0/0:23,0:23:63.11:0,63,621	0/0:29,1:30:23.88:0,24,513	1/1:1,9:10:23.44:318,23,0	0/0:30,0:28:78.12:0,78,752	0/0:19,0:19:45.53:0,46,435	0/0:16,0:16:27.04:0,27,260	0/0:16,0:16:42.07:0,42,405	0/0:15,0:15:39.05:0,39,371	0/0:35,0:35:99:0,105,1014	0/0:11,0:11:24.04:0,24,231	0/0:28,0:28:75.12:0,75,723	0/0:25,0:24:54.09:0,54,521	0/0:8,0:8:24.04:0,24,232
chr10	85365457	.	TTTG	T	8976.31	PASS	AB=0.682;AC=37;AF=0.661;AN=56;BaseQRankSum=13.235;DP=546;FS=1.799;HRun=0;HaplotypeScore=124.6445;InbreedingCoeff=0.8865;MQ=49.71;MQ0=14;MQRankSum=-7.740;QD=25.79;ReadPosRankSum=1.446;VQSLOD=5.2070;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,17:29:62.97:761,63,0	1/1:4,1:5:9.02:106,9,0	0/0:35,0:15:24.05:0,24,410	0/0:39,0:23:44.50:0,45,661	0/0:21,0:21:63.20:0,63,1166	0/0:21,0:21:57.18:0,57,1031	1/1:7,8:15:29.51:317,30,0	1/1:5,16:21:48.13:622,48,0	0/0:11,0:11:27.09:0,27,507	1/1:5,15:20:45.14:620,45,0	1/1:3,15:18:42.12:524,42,0	1/1:2,20:22:60.18:749,60,0	1/1:6,10:16:38.98:427,39,0	1/1:2,10:12:30.09:365,30,0	1/1:13,5:18:36.05:458,36,0	1/1:10,12:22:50.95:651,51,0	1/1:12,16:28:30.01:367,30,0	0/1:8,7:15:31.76:361,0,32	1/1:8,17:24:23.77:625,24,0	1/1:4,13:17:42.05:494,42,0	1/1:3,10:13:6.02:68,6,0	0/0:16,0:16:39.12:0,39,726	0/0:13,0:13:33.11:0,33,609	0/0:31,0:31:69.21:0,69,1354	0/0:11,0:11:27.09:0,27,499	1/1:4,22:26:69.21:945,69,0	1/1:3,16:18:30.10:402,30,0	1/1:4,3:7:9.03:115,9,0
chr10	85365472	.	ATTGTTG	A	10449.45	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=11.278;DP=527;FS=6.098;HRun=0;HaplotypeScore=155.4563;InbreedingCoeff=0.9641;MQ=48.25;MQ0=12;MQRankSum=-9.938;QD=30.92;ReadPosRankSum=-0.458;VQSLOD=4.3217;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,13:30:67.80:918,68,0	1/1:3,1:4:12.04:230,12,0	0/0:30,0:13:21.07:0,21,563	0/0:34,0:21:33:0,33,729	0/0:21,0:21:36.12:0,36,1195	0/0:21,0:20:45.15:0,45,1397	1/1:9,4:13:29.69:464,30,0	1/1:27,2:29:59.75:848,60,0	0/0:13,0:13:30.08:0,30,765	1/1:12,8:20:42.14:753,42,0	1/1:5,11:16:38.49:670,38,0	1/1:11,13:24:47.83:840,48,0	1/1:6,6:12:26.81:401,27,0	1/1:9,5:14:36.22:510,36,0	1/1:9,5:14:26.58:453,27,0	1/1:8,12:20:50.32:760,50,0	1/1:21,4:25:35.69:509,36,0	1/1:15,3:18:18.09:364,18,0	1/1:15,6:21:33.04:528,33,0	1/1:7,8:16:38.38:599,38,0	1/1:14,1:15:17.37:116,17,0	0/0:14,0:14:42.13:0,42,1297	0/0:14,0:14:30.09:0,30,749	0/0:26,0:26:63.20:0,63,1936	0/0:16,0:16:39.12:0,39,1005	1/1:17,9:26:48.11:845,48,0	1/1:10,8:18:33.09:581,33,0	1/1:2,1:3:3.01:59,3,0
chr10	85365670	.	T	TAAGG	11980.64	PASS	AB=0.633;AC=37;AF=0.661;AN=56;BaseQRankSum=-0.268;DP=404;FS=11.713;HRun=0;HaplotypeScore=68.8667;InbreedingCoeff=0.8924;MQ=69.68;MQ0=1;MQRankSum=-8.296;QD=46.44;ReadPosRankSum=-0.058;VQSLOD=4.2920;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,11:19:3.79:500,0,4	1/1:3,4:7:12:245,12,0	0/0:19,0:16:32.29:0,32,458	0/0:16,0:15:24.08:0,24,407	0/0:19,0:19:48.15:0,48,788	0/0:19,0:19:48.16:0,48,815	1/1:3,17:20:48.16:1160,48,0	1/1:19,7:24:30.10:743,30,0	0/0:16,0:16:42.11:0,42,658	1/1:3,14:17:42.14:1046,42,0	1/1:4,6:10:21.07:446,21,0	1/1:2,8:10:24.08:599,24,0	1/1:5,13:19:51.18:1269,51,0	1/1:3,11:14:39.13:959,39,0	1/1:7,8:15:30.10:748,30,0	1/1:3,7:10:24.08:595,24,0	1/1:3,8:11:12.04:300,12,0	1/1:5,1:6:3.01:75,3,0	1/1:9,7:17:27.09:670,27,0	1/1:5,11:16:39.13:950,39,0	1/1:2,5:7:12.04:299,12,0	0/0:14,0:14:39.12:0,39,637	0/0:16,0:16:36.12:0,36,611	0/0:18,0:18:48.16:0,48,814	0/0:9,0:9:24.08:0,24,407	1/1:5,8:14:24.08:567,24,0	1/1:4,10:15:24.08:586,24,0	1/1:2,3:5:9.03:225,9,0
chr10	85365756	.	A	AGAGAGAGC	5538.12	PASS	AB=0.650;AC=33;AF=0.611;AN=54;BaseQRankSum=4.338;DP=455;FS=25.733;HRun=0;HaplotypeScore=125.7484;InbreedingCoeff=0.6554;MQ=60.91;MQ0=12;MQRankSum=-5.953;QD=20.29;ReadPosRankSum=-1.182;VQSLOD=2.1073;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:22:45.99:659,46,0	1/1:4,0:4:9.02:147,9,0	0/0:41,0:20:11.98:0,12,371	0/0:49,0:19:14.14:0,14,330	0/0:16,0:15:41.96:0,42,748	0/0:19,0:19:50.91:0,51,956	0/1:14,0:16:25.96:196,0,26	1/1:28,0:24:71.86:663,72,0	0/0:15,0:15:41.97:0,42,926	1/1:7,0:7:21.04:353,21,0	1/1:16,0:17:8.99:143,9,0	0/1:1,0:13:33.40:123,0,33	0/1:3,0:20:29.71:74,0,30	1/1:2,0:10:4.01:113,4,0	1/1:2,8:21:15.05:648,15,0	1/1:1,7:13:8.96:289,9,0	1/1:0,0:8:6.02:236,6,0	./.	1/1:16,0:16:43.66:373,44,0	1/1:15,0:14:11.76:76,12,0	1/1:7,0:7:5.96:45,6,0	0/0:6,0:5:15:0,15,191	0/0:10,0:10:27.05:0,27,497	0/0:15,0:15:35.84:0,36,608	0/0:7,0:7:17.96:0,18,324	1/1:13,0:15:33.68:513,34,0	1/1:29,0:29:65.69:724,66,0	1/1:11,0:10:4.97:163,5,0
chr10	85365829	.	T	TGTTTC	1140.17	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-1.201;DP=687;FS=0.988;HRun=0;HaplotypeScore=178.3849;InbreedingCoeff=-0.1281;MQ=65.47;MQ0=9;MQRankSum=-0.805;QD=3.44;ReadPosRankSum=-4.291;VQSLOD=1.5141;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:58.58:0,59,989	0/0:5,0:5:14.97:0,15,162	0/0:36,0:25:28.14:0,28,525	0/1:72,0:38:1.43:1,0,578	0/0:16,0:16:42.14:0,42,789	0/0:16,0:16:45.11:0,45,736	0/1:35,0:35:12.52:13,0,683	0/1:21,0:21:84.78:144,0,85	0/0:16,0:16:42.03:0,42,637	0/0:28,0:27:9.03:0,9,494	0/0:24,0:24:9.98:0,10,538	0/0:22,0:22:57.10:0,57,675	0/0:30,0:30:58.06:0,58,734	0/0:20,0:20:46.67:0,47,551	0/1:29,0:29:26.09:26,0,147	0/1:17,0:17:12.53:13,0,105	0/0:20,0:20:42.13:0,42,524	1/1:1,9:10:5.22:170,5,0	0/1:22,0:21:53.85:239,0,54	0/1:20,0:20:75.72:166,0,76	0/1:34,0:34:43.25:43,0,193	0/0:22,0:21:60.15:0,60,1143	0/0:18,0:18:44.94:0,45,687	0/0:28,0:28:72.14:0,72,1217	0/0:18,0:18:51:0,51,849	0/1:26,0:27:57.14:142,0,57	0/1:34,0:34:99:201,0,187	0/1:10,0:10:45.87:132,0,46
chr10	85366032	.	AT	A	15215.10	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=15.711;DP=607;FS=5.239;HRun=2;HaplotypeScore=92.2437;InbreedingCoeff=0.9999;MQ=79.44;MQ0=0;MQRankSum=-2.484;QD=34.82;ReadPosRankSum=4.696;VQSLOD=5.0968;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:66.21:856,66,0	1/1:0,15:15:42.14:544,42,0	0/0:18,0:18:50.88:0,51,679	0/0:19,0:19:41.34:0,41,590	0/0:15,0:15:45.15:0,45,672	0/0:32,0:32:96.23:0,96,1374	1/1:0,25:25:66.21:856,66,0	1/1:0,27:27:75.21:934,75,0	0/0:19,0:19:54.11:0,54,780	1/1:0,20:20:60.19:765,60,0	1/1:1,15:16:39.10:488,39,0	1/1:0,23:23:57.19:740,57,0	1/1:2,20:22:54.18:700,54,0	1/1:0,26:26:78.25:1007,78,0	1/1:2,25:27:69.22:895,69,0	1/1:0,24:24:69.22:892,69,0	1/1:0,17:17:45.14:576,45,0	1/1:0,17:17:51.17:662,51,0	1/1:1,14:15:42.14:545,42,0	1/1:0,24:24:66.21:850,66,0	1/1:0,25:25:75.24:974,75,0	0/0:17,0:17:48.13:0,48,694	0/0:17,0:17:51.17:0,51,753	0/0:20,0:20:60.12:0,60,849	0/0:13,0:13:39.10:0,39,552	1/1:0,34:34:99:1300,102,0	1/1:1,37:38:96.31:1243,96,0	1/1:0,13:13:30.10:389,30,0
chr10	85366498	.	CT	C	6238.51	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=7.804;DP=486;FS=0.392;HRun=9;HaplotypeScore=84.8827;InbreedingCoeff=0.8835;MQ=71.14;MQ0=2;MQRankSum=-5.634;QD=19.93;ReadPosRankSum=0.779;VQSLOD=5.0702;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:15:37.52:353,38,0	1/1:2,9:11:21.01:192,21,0	0/1:23,0:9:7.83:8,0,91	0/0:27,0:23:1.09:0,1,262	0/0:31,0:31:82.27:0,82,949	0/0:38,0:38:99:0,99,1121	1/1:0,7:7:18.01:164,18,0	1/1:4,28:32:81.03:741,81,0	0/0:18,0:18:47.81:0,48,530	1/1:3,10:13:30.01:273,30,0	1/1:3,14:17:35.94:318,36,0	1/1:3,11:14:24.01:220,24,0	1/1:0,16:16:45.02:410,45,0	1/1:2,8:10:24.01:220,24,0	1/1:0,13:13:30.02:274,30,0	1/1:0,13:13:36.02:329,36,0	1/1:2,13:15:36.02:328,36,0	1/1:4,15:19:42.01:383,42,0	1/1:6,11:17:33.01:300,33,0	1/1:1,9:10:27.01:247,27,0	1/1:0,9:9:27.01:246,27,0	0/0:17,0:17:42.12:0,42,482	0/0:12,0:12:33.10:0,33,381	0/0:10,0:10:18.05:0,18,208	0/0:17,0:17:42.12:0,42,483	1/1:4,16:20:48.02:439,48,0	1/1:3,24:27:68.95:630,69,0	1/1:4,8:12:18.01:164,18,0
chr10	85366546	.	T	TC	3654.91	PASS	AB=0.670;AC=22;AF=0.393;AN=56;BaseQRankSum=15.635;DP=444;FS=8.496;HRun=0;HaplotypeScore=115.2135;InbreedingCoeff=-0.3165;MQ=67.32;MQ0=0;MQRankSum=-6.457;QD=11.57;ReadPosRankSum=8.886;VQSLOD=2.9838;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,12:23:99:210,0,136	0/1:4,1:5:0.96:64,0,1	0/0:10,0:10:6.29:0,6,247	0/1:14,0:12:32.29:32,0,150	0/0:28,0:28:81.27:0,81,1122	0/0:28,0:28:84.28:0,84,1174	0/1:5,6:11:55.69:98,0,56	0/1:15,4:19:38.31:38,0,145	0/0:12,0:12:36.12:0,36,503	1/1:6,12:18:10.77:312,11,0	0/1:7,17:24:8.04:352,0,8	0/1:5,8:13:15.52:171,0,16	0/1:6,14:20:28.39:256,0,28	0/1:4,7:11:19.59:114,0,20	0/1:2,12:14:20.66:235,0,21	0/1:3,13:16:20.30:262,0,20	0/1:4,11:15:42.58:187,0,43	0/1:8,6:14:48.25:177,0,48	0/1:11,6:17:67.56:121,0,68	0/1:8,9:17:97.87:147,0,98	0/1:4,3:7:40.24:66,0,40	0/0:14,0:14:42.13:0,42,565	0/0:13,0:13:39.13:0,39,544	0/0:3,0:3:9.03:0,9,126	0/0:20,0:20:60.20:0,60,838	0/1:14,17:30:36.58:390,0,37	0/1:7,16:22:25.55:322,0,26	1/1:0,4:4:11.98:101,12,0
chr10	85366547	.	T	TTTC	8841.83	PASS	AB=0.699;AC=34;AF=0.607;AN=56;BaseQRankSum=11.185;DP=445;FS=2.599;HRun=0;HaplotypeScore=114.0410;InbreedingCoeff=0.5665;MQ=66.23;MQ0=0;MQRankSum=-5.401;QD=29.08;ReadPosRankSum=3.615;VQSLOD=5.0571;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,12:23:54.14:532,0,54	1/1:3,1:5:10.80:114,11,0	0/0:10,0:10:20.99:0,21,313	0/0:13,0:11:5.16:0,5,149	0/0:28,0:28:81.28:0,81,1372	0/0:28,0:28:84.27:0,84,1399	0/1:4,6:10:6.40:219,0,6	0/1:16,4:20:27.05:247,0,27	0/0:12,0:12:36.12:0,36,606	1/1:6,12:18:38.60:738,39,0	1/1:7,17:24:19.44:843,19,0	1/1:5,7:13:7.65:442,8,0	1/1:6,14:20:3.74:617,4,0	1/1:4,7:11:1.67:301,2,0	1/1:2,12:14:17.28:530,17,0	1/1:4,12:16:31.41:584,31,0	1/1:4,11:15:6.29:450,6,0	1/1:9,5:14:14.29:270,14,0	1/1:11,6:17:2.19:374,2,0	0/1:10,9:19:13.49:388,0,13	1/1:4,3:7:7.52:123,8,0	0/0:14,0:14:42.14:0,42,687	0/0:13,0:13:39.13:0,39,659	0/0:3,0:3:9.03:0,9,153	0/0:20,0:20:60.21:0,60,1014	1/1:14,17:30:58.01:998,58,0	1/1:6,16:22:45.89:872,46,0	1/1:0,4:4:12.04:201,12,0
chr10	85366699	.	AT	A	9692.88	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=11.019;DP=553;FS=0.000;HRun=8;HaplotypeScore=53.2738;InbreedingCoeff=0.9287;MQ=73.23;MQ0=0;MQRankSum=-2.024;QD=23.53;ReadPosRankSum=-0.458;VQSLOD=5.1072;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,30:34:87.14:840,87,0	1/1:1,5:6:15.02:145,15,0	0/0:9,0:9:24.07:0,24,281	0/1:9,0:9:6.36:6,0,123	0/0:21,0:21:51.16:0,51,616	0/0:23,0:23:66.18:0,66,775	1/1:2,26:28:69.11:666,69,0	1/1:6,24:30:72.08:684,72,0	0/0:15,0:15:42.12:0,42,497	1/1:2,18:20:54.09:522,54,0	1/1:1,16:17:43.88:410,44,0	1/1:2,14:16:36.05:347,36,0	1/1:2,17:19:51.08:492,51,0	1/1:5,16:21:48.07:463,48,0	1/1:3,23:26:63.10:607,63,0	1/1:1,14:15:42.07:406,42,0	1/1:2,24:26:72.11:695,72,0	1/1:3,12:15:30.05:290,30,0	1/1:4,20:24:57.52:543,58,0	1/1:0,23:23:69.11:665,69,0	1/1:3,20:23:51.08:493,51,0	0/0:10,0:10:27.08:0,27,326	0/0:14,0:14:39.12:0,39,471	0/0:28,1:29:52.26:0,52,901	0/0:20,0:20:57.17:0,57,688	1/1:3,23:26:66.10:637,66,0	1/1:4,18:22:45.06:434,45,0	1/1:0,12:12:36.06:348,36,0
chr10	85367631	.	G	GT	385.27	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.992;DP=560;FS=2.823;HRun=10;HaplotypeScore=55.8909;InbreedingCoeff=0.6796;MQ=73.66;MQ0=0;MQRankSum=-2.016;QD=16.05;ReadPosRankSum=-0.750;VQSLOD=3.7614;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:29:66.92:0,67,516	0/0:9,0:9:23.96:0,24,195	0/0:19,0:20:12.07:0,12,209	0/0:11,0:7:1.56:0,2,94	0/0:30,0:30:83.73:0,84,669	0/0:28,0:28:44.72:0,45,512	0/0:13,0:13:29.96:0,30,246	0/0:27,1:29:35.71:0,36,471	0/0:20,0:20:50.93:0,51,419	0/0:30,0:31:70.93:0,71,579	0/0:20,0:21:61.74:0,62,481	0/0:18,0:18:50.94:0,51,419	0/0:16,0:16:35.92:0,36,292	0/0:13,0:13:38.96:0,39,320	0/0:10,1:13:2.05:0,2,201	0/0:17,0:17:44.81:0,45,357	0/0:13,0:13:26.95:0,27,219	1/1:7,17:24:45.58:480,46,0	0/0:40,0:40:99:0,104,831	0/0:28,0:29:76.91:0,77,615	0/0:9,0:11:28.04:0,28,209	0/0:18,0:19:55.94:0,56,444	0/0:24,0:24:62.89:0,63,515	0/0:9,0:10:22.97:0,23,172	0/0:19,0:19:56.89:0,57,458	0/0:18,0:20:46.98:0,47,396	0/0:21,0:23:60.95:0,61,471	0/0:9,0:10:23.01:0,23,178
chr10	85369053	.	GTCAGC	G	20430.55	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=12.869;DP=640;FS=2.818;HRun=0;HaplotypeScore=134.0860;InbreedingCoeff=0.9991;MQ=88.52;MQ0=0;MQRankSum=-9.642;QD=46.75;ReadPosRankSum=2.908;VQSLOD=4.8347;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:90.31:1795,90,0	1/1:0,8:8:21.07:405,21,0	0/0:23,0:23:57.20:0,57,1527	0/0:29,0:29:80.22:0,80,2084	0/0:18,0:18:51.18:0,51,1514	0/0:26,0:26:78.27:0,78,2291	1/1:3,25:28:60.21:1230,60,0	1/1:4,23:27:66.23:1335,66,0	0/0:26,0:26:66.23:0,66,1929	1/1:4,17:21:51.16:975,51,0	1/1:2,17:19:48.16:906,48,0	1/1:2,14:16:39.13:800,39,0	1/1:2,25:27:66.23:1354,66,0	1/1:4,22:26:63.22:1292,63,0	1/1:2,32:34:72.25:1451,72,0	1/1:2,12:14:33.11:652,33,0	1/1:4,34:38:81.28:1662,81,0	1/1:1,20:21:45.15:923,45,0	1/1:6,15:21:41.72:814,42,0	1/1:1,16:17:42.14:759,42,0	1/1:2,26:28:62.92:1252,63,0	0/0:17,0:17:51.17:0,51,1508	0/0:16,0:16:42.14:0,42,1238	0/0:34,0:34:96.33:0,96,2883	0/0:14,0:14:36.12:0,36,1014	1/1:4,23:27:72.25:1472,72,0	1/1:2,19:21:39.08:800,39,0	1/1:0,9:9:27.09:554,27,0
chr10	85369297	.	GA	G	4439.24	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.973;DP=638;FS=2.195;HRun=2;HaplotypeScore=90.7098;InbreedingCoeff=0.9951;MQ=90.30;MQ0=0;MQRankSum=-2.391;QD=33.89;ReadPosRankSum=2.267;VQSLOD=5.0619;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.22:0,96,1384	0/0:5,0:5:15.05:0,15,224	0/0:22,0:22:66.21:0,66,953	0/0:28,0:28:81.22:0,81,1156	0/0:20,0:20:60.20:0,60,895	0/0:19,0:19:57.19:0,57,853	1/1:0,40:40:93.30:1208,93,0	0/0:30,0:30:87.29:0,87,1304	0/0:15,0:15:45.15:0,45,674	0/0:17,0:17:51.17:0,51,764	0/0:15,0:15:45.08:0,45,647	1/1:1,33:34:90.29:1168,90,0	1/1:1,35:36:96.31:1245,96,0	1/1:0,21:21:63.20:818,63,0	0/0:25,0:25:75.25:0,75,1124	0/0:14,0:14:42.14:0,42,629	0/0:26,0:26:75.20:0,75,1056	0/0:24,0:24:69.23:0,69,1029	0/0:23,0:23:66.21:0,66,969	0/0:18,0:18:54.18:0,54,802	0/0:31,0:31:93.30:0,93,1371	0/0:12,0:12:36.12:0,36,529	0/0:11,0:11:30.10:0,30,450	0/0:27,0:27:81.22:0,81,1169	0/0:25,0:25:75.22:0,75,1083	0/0:28,0:28:81.27:0,81,1212	0/0:30,0:30:90.19:0,90,1264	0/0:9,0:9:27.08:0,27,377
chr10	85369503	.	A	AATAGTT	8039.36	PASS	AB=1.000;AC=31;AF=0.574;AN=54;BaseQRankSum=2.947;DP=342;FS=2.274;HRun=0;HaplotypeScore=74.7410;InbreedingCoeff=0.6782;MQ=69.14;MQ0=0;MQRankSum=-8.261;QD=37.92;ReadPosRankSum=-3.758;VQSLOD=3.8947;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.18:0,57,1039	1/1:0,7:8:12.04:403,12,0	0/0:8,0:8:11.99:0,12,142	0/0:4,0:4:0.89:0,1,2	0/0:21,0:21:51.16:0,51,1036	0/0:18,0:18:45.13:0,45,899	0/1:3,0:3:9.74:10,0,43	1/1:24,0:35:75.21:1315,75,0	0/0:8,0:8:21.06:0,21,416	1/1:7,0:9:24.06:410,24,0	1/1:2,8:10:19.26:476,19,0	0/1:10,0:10:12.97:76,0,13	0/1:10,0:10:23.77:82,0,24	1/1:2,0:2:3.01:41,3,0	1/1:4,5:9:18.02:524,18,0	1/1:2,4:6:6.02:202,6,0	1/1:4,15:20:21.07:640,21,0	0/0:17,0:17:39.12:0,39,761	1/1:6,10:16:42.08:865,42,0	1/1:5,7:12:17.88:271,18,0	1/1:3,0:4:6.01:79,6,0	./.	0/0:4,0:4:9.02:0,9,155	0/0:9,0:9:21.07:0,21,456	0/0:17,0:17:45.13:0,45,908	1/1:1,18:20:51.05:992,51,0	1/1:4,22:27:33.11:1050,33,0	1/1:3,7:10:18.06:605,18,0
chr10	85369516	.	A	ATAG	2853.20	PASS	AB=0.957;AC=16;AF=0.296;AN=54;BaseQRankSum=7.797;DP=337;FS=11.479;HRun=0;HaplotypeScore=79.6349;InbreedingCoeff=-0.3138;MQ=67.89;MQ0=0;MQRankSum=-9.797;QD=15.10;ReadPosRankSum=4.106;VQSLOD=2.2313;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.24:0,69,1167	0/1:8,0:8:33.91:144,0,34	0/0:7,0:7:15.03:0,15,175	0/0:6,0:5:2.21:0,2,12	0/0:21,0:21:60.18:0,60,987	0/0:20,0:20:54.18:0,54,915	0/0:2,0:2:6.01:0,6,72	0/1:28,4:32:99:581,0,421	0/0:12,0:12:36.10:0,36,566	0/1:5,6:11:46.69:164,0,47	0/1:9,0:9:33.98:175,0,34	0/1:8,0:8:0.66:1,0,17	0/0:8,0:8:0.10:0,0,29	1/1:4,0:4:0.89:2,1,0	0/1:7,0:7:83.24:179,0,83	0/1:6,0:6:67.53:68,0,90	0/1:16,0:16:76.10:216,0,76	0/0:15,0:15:42.14:0,42,726	0/1:15,2:16:99:340,0,184	0/1:10,0:10:54.31:54,0,190	0/1:3,0:3:6.91:50,0,7	./.	0/0:4,0:4:12.04:0,12,211	0/0:8,0:8:24.08:0,24,402	0/0:21,0:21:63.22:0,63,1096	0/1:21,0:21:99:447,0,233	0/1:25,1:26:99:357,0,188	0/1:11,0:11:99:220,0,179
chr10	85369519	.	G	GTTATTATTATTA	1845.37	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=7.756;DP=330;FS=8.193;HRun=0;HaplotypeScore=132.8979;InbreedingCoeff=-0.2158;MQ=63.76;MQ0=0;MQRankSum=-8.574;QD=7.63;ReadPosRankSum=3.234;VQSLOD=1.6410;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:55.80:56,0,1181	0/1:8,0:8:23.13:54,0,23	0/0:4,0:4:8.82:0,9,122	0/1:6,0:5:0.95:1,0,32	0/0:21,0:21:63.16:0,63,1798	0/0:18,0:18:54.14:0,54,1529	1/1:2,0:2:6.01:118,6,0	0/1:33,0:33:99:202,0,822	0/0:11,0:11:33.09:0,33,1005	0/1:9,0:9:14.56:15,0,117	0/1:10,0:10:56.91:62,0,57	1/1:1,4:6:6.02:354,6,0	1/1:1,6:9:6.49:356,6,0	1/1:0,3:4:3.01:177,3,0	0/1:7,0:7:51.72:52,0,105	0/1:5,0:5:17.30:17,0,83	0/1:14,0:14:69.94:92,0,70	0/1:15,0:15:1.90:2,0,909	0/1:19,0:18:99:100,0,311	0/1:11,0:11:35.50:36,0,219	0/1:2,0:2:11.02:13,0,11	0/0:1,0:1:3:0,3,25	0/0:4,0:4:12.04:0,12,441	0/0:8,0:8:24.05:0,24,598	0/0:21,0:21:63.19:0,63,1996	0/1:22,0:22:89.07:89,0,355	0/1:26,0:26:99:102,0,295	0/1:11,0:11:99:110,0,304
chr10	85370457	.	TTC	T	4048.58	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=1.761;DP=542;FS=0.392;HRun=0;HaplotypeScore=80.3583;InbreedingCoeff=0.7658;MQ=71.52;MQ0=3;MQRankSum=-1.985;QD=11.34;ReadPosRankSum=-6.867;VQSLOD=1.9141;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:13.63:172,14,0	1/1:5,1:6:13.74:109,14,0	0/0:45,1:19:18.60:0,19,269	0/0:31,0:16:32.82:0,33,352	0/0:24,0:24:65.17:0,65,807	0/0:30,0:29:86.22:0,86,1032	1/1:18,0:18:22.16:147,22,0	1/1:20,1:20:47.45:358,47,0	0/0:11,0:11:33.07:0,33,412	1/1:18,0:17:28.87:203,29,0	1/1:17,2:18:41.23:329,41,0	1/1:14,0:14:20.73:117,21,0	1/1:24,0:24:43.05:272,43,0	1/1:14,0:14:20.87:134,21,0	0/1:24,0:24:3.85:139,0,4	0/1:13,0:12:2.60:82,0,3	1/1:25,1:25:20.51:146,21,0	1/1:21,1:22:12.53:144,13,0	1/1:17,0:16:15.16:252,15,0	1/1:26,1:27:53.60:520,54,0	1/1:12,0:12:1.82:5,2,0	0/1:4,0:4:1.29:1,0,71	0/0:13,0:13:0.53:0,1,360	0/0:10,0:10:26.37:0,26,292	0/0:20,0:20:39.84:0,40,633	1/1:22,1:23:57.94:461,58,0	1/1:18,0:18:29.95:252,30,0	1/1:16,2:18:20.73:205,21,0
chr10	85370458	.	TC	T	6236.74	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=2.174;DP=540;FS=1.810;HRun=1;HaplotypeScore=64.8991;InbreedingCoeff=0.8534;MQ=71.49;MQ0=3;MQRankSum=-2.136;QD=17.67;ReadPosRankSum=-5.697;VQSLOD=3.2749;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:40.32:268,40,0	1/1:5,1:6:17.98:155,18,0	0/0:46,0:19:20.81:0,21,253	0/0:32,0:16:32.53:0,33,305	0/0:23,0:23:60.23:0,60,606	0/0:30,0:29:65.24:0,65,776	1/1:17,0:17:27.63:203,28,0	1/1:17,4:20:54.39:499,54,0	0/0:11,0:11:32.70:0,33,310	1/1:0,16:15:32.95:291,33,0	1/1:15,4:18:48.11:451,48,0	1/1:14,0:14:29.62:186,30,0	1/1:22,1:23:56.14:400,56,0	1/1:14,0:14:32.22:232,32,0	1/1:21,3:24:59.04:373,59,0	1/1:12,1:12:27.30:213,27,0	1/1:1,25:25:21.06:273,21,0	1/1:22,0:22:46.97:276,47,0	1/1:14,2:16:39.60:382,40,0	1/1:20,7:27:76.45:740,76,0	1/1:0,12:12:3:27,3,0	0/1:5,0:5:22.16:22,0,46	0/0:13,0:13:2.53:0,3,271	0/0:10,0:10:25.68:0,26,234	0/0:22,0:22:32.19:0,32,467	1/1:20,3:23:62.08:568,62,0	1/1:17,2:19:50.06:426,50,0	1/1:3,15:18:21.05:250,21,0
chr10	85372119	.	T	TATATA	1206.21	PASS	AB=1.000;AC=28;AF=0.636;AN=44;BaseQRankSum=7.793;DP=173;FS=1.717;HRun=0;HaplotypeScore=41.3183;InbreedingCoeff=0.6223;MQ=78.31;MQ0=3;MQRankSum=-6.040;QD=16.75;ReadPosRankSum=-1.996;VQSLOD=2.5808;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:17:15.05:396,15,0	0/1:2,0:2:0:0,0,0	1/1:2,0:2:1.25:3,1,0	0/1:8,0:8:32.02:32,0,75	0/0:22,0:22:66.21:0,66,1374	0/0:19,0:19:57.18:0,57,1209	1/1:0,0:1:3.01:72,3,0	1/1:9,0:9:17.83:154,18,0	0/0:10,0:10:30.10:0,30,639	1/1:1,0:1:3.01:30,3,0	./.	1/1:0,2:5:9.03:238,9,0	./.	1/1:0,0:4:9.03:217,9,0	./.	1/1:2,0:2:0.47:1,0,0	1/1:2,0:3:2.99:23,3,0	1/1:3,0:9:8.95:70,9,0	1/1:3,0:3:5.97:47,6,0	./.	1/1:1,0:1:0.47:1,0,0	0/0:7,0:7:18.05:0,18,307	0/0:10,0:10:30.10:0,30,695	0/0:5,0:5:15.05:0,15,215	0/0:21,0:21:63.21:0,63,1343	1/1:3,0:3:6.46:77,6,0	./.	./.
chr10	85372680	.	A	AG	11905.06	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=15.915;DP=699;FS=2.135;HRun=0;HaplotypeScore=114.9774;InbreedingCoeff=0.9601;MQ=76.99;MQ0=0;MQRankSum=-5.285;QD=25.12;ReadPosRankSum=1.476;VQSLOD=5.6029;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,35:40:89.48:1081,89,0	1/1:1,6:7:18.06:222,18,0	0/0:15,0:15:42.05:0,42,502	0/0:15,0:15:42.14:0,42,570	0/0:34,0:34:96.31:0,96,1324	0/0:29,0:29:87.28:0,87,1197	1/1:1,1:22:46.39:215,46,0	1/1:6,21:27:56.36:651,56,0	0/0:33,0:33:96.29:0,96,1317	1/1:2,24:26:65.77:800,66,0	1/1:1,14:15:35.90:437,36,0	1/1:3,0:31:58.82:265,59,0	1/1:1,0:23:62.95:282,63,0	1/1:1,2:27:58.64:268,59,0	1/1:1,30:32:82.44:995,82,0	1/1:1,17:18:9.53:539,10,0	1/1:3,31:34:73.33:907,73,0	1/1:2,19:21:60.64:724,61,0	1/1:2,19:21:58.73:692,59,0	1/1:2,19:21:55.96:671,56,0	1/1:4,53:57:99:1718,141,0	0/0:24,0:24:72.23:0,72,988	0/0:17,0:17:51.16:0,51,698	0/0:26,0:26:78.26:0,78,1086	0/0:32,0:32:93.30:0,93,1285	1/1:4,26:30:76.60:933,77,0	1/1:7,12:19:7.37:436,7,0	1/1:1,2:3:5.41:72,5,0
chr10	85372918	.	GT	G	9583.44	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=11.158;DP=639;FS=1.490;HRun=10;HaplotypeScore=65.0309;InbreedingCoeff=0.9409;MQ=73.24;MQ0=0;MQRankSum=-0.575;QD=21.16;ReadPosRankSum=2.088;VQSLOD=5.8949;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:35:92.98:807,93,0	1/1:0,12:12:35.99:312,36,0	0/0:11,0:11:17.81:0,18,161	0/1:12,0:12:2.68:3,0,196	0/0:32,1:33:52.13:0,52,787	0/0:23,0:23:69.16:0,69,746	1/1:3,16:19:17.81:384,18,0	1/1:7,26:33:75.83:646,76,0	0/0:24,0:25:69.01:0,69,736	1/1:5,29:34:56.72:713,57,0	1/1:2,13:15:38.99:339,39,0	1/1:0,27:27:74.94:644,75,0	1/1:3,21:24:62.98:547,63,0	1/1:4,16:20:41.98:365,42,0	1/1:0,28:28:74.99:651,75,0	1/1:4,19:23:56.96:495,57,0	1/1:2,20:22:53.99:469,54,0	1/1:1,28:29:74.87:651,75,0	1/1:4,19:23:53.95:466,54,0	1/1:3,20:23:56.65:479,57,0	1/1:2,6:8:17.99:156,18,0	0/0:24,0:24:69.19:0,69,763	0/0:26,0:28:71.99:0,72,747	0/0:9,0:9:21.06:0,21,232	0/0:33,0:33:96.26:0,96,1059	1/1:3,29:32:83.96:729,84,0	1/1:2,20:22:56.99:495,57,0	1/1:3,9:12:26.99:234,27,0
chr10	85374942	.	T	TAC	8498.44	PASS	AB=0.820;AC=24;AF=0.429;AN=56;BaseQRankSum=20.361;DP=1074;FS=71.769;HRun=0;HaplotypeScore=405.0596;InbreedingCoeff=-0.7501;MQ=47.29;MQ0=0;MQRankSum=-18.014;QD=8.68;ReadPosRankSum=-6.885;VQSLOD=1.8783;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:35,8:43:99:273,0,773	0/1:7,2:9:85.21:85,0,251	0/0:22,0:15:39.04:0,39,524	0/0:11,0:10:27.06:0,27,338	0/1:43,16:59:99:279,0,1261	0/1:24,5:29:99:189,0,729	0/1:19,2:20:47.48:47,0,605	0/0:50,0:50:99:0,132,1938	0/1:37,7:44:99:317,0,1131	0/1:71,16:87:99:722,0,2590	0/1:30,12:42:99:413,0,851	0/1:35,11:46:99:526,0,1119	0/1:43,4:47:99:144,0,1503	0/1:37,9:46:99:341,0,1389	0/1:47,4:51:99:115,0,1278	0/1:46,7:53:99:253,0,1579	0/1:14,6:20:99:243,0,406	0/1:17,4:20:99:183,0,500	0/0:12,0:12:33.07:0,33,463	0/1:35,13:48:99:608,0,1031	0/1:27,4:31:99:131,0,1092	0/1:33,21:54:99:899,0,978	0/1:21,10:31:99:345,0,511	0/1:11,8:19:94.15:94,0,208	0/1:27,18:45:99:928,0,702	0/1:46,11:57:99:577,0,1659	0/1:44,10:53:99:505,0,1351	0/1:15,7:22:99:281,0,527
chr10	85375077	.	G	GTGTA	383.87	PASS	AB=0.961;AC=5;AF=0.093;AN=54;BaseQRankSum=6.413;DP=428;FS=6.566;HRun=0;HaplotypeScore=139.7534;InbreedingCoeff=0.2610;MQ=37.28;MQ0=1;MQRankSum=-5.248;QD=6.00;ReadPosRankSum=-0.242;VQSLOD=2.1473;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:7:1.23:1,0,19	0/0:10,0:10:17.99:0,18,328	0/0:6,0:3:9.03:0,9,188	0/0:2,0:1:3.01:0,3,53	0/0:16,0:16:14.32:0,14,301	0/0:18,0:18:39.12:0,39,771	0/0:9,0:9:6.01:0,6,111	0/1:39,6:45:99:455,0,1482	0/0:16,0:16:18.15:0,18,426	0/0:23,0:23:69.23:0,69,1354	./.	0/0:33,0:33:15.64:0,16,1128	0/0:24,0:24:15.26:0,15,665	0/0:23,0:23:27.06:0,27,518	0/0:27,0:27:11.98:0,12,162	0/0:20,0:19:8.99:0,9,116	0/0:6,0:6:4.83:0,5,67	1/1:6,0:6:2.88:15,3,0	0/0:7,0:7:21.07:0,21,420	0/0:19,0:19:27.08:0,27,483	0/0:5,0:5:6.02:0,6,97	0/0:16,0:16:30.09:0,30,568	0/0:17,0:17:27.07:0,27,512	0/1:6,0:6:0.02:0,0,0	0/0:17,0:17:33.10:0,33,634	0/0:16,0:15:45.11:0,45,843	0/0:22,0:22:21.03:0,21,371	0/0:6,0:6:8.99:0,9,108
chr10	85375243	.	A	AAC	513	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.806;DP=892;FS=0.000;HRun=0;HaplotypeScore=238.3489;InbreedingCoeff=0.9950;MQ=54.34;MQ0=2;MQRankSum=0.401;QD=16.03;ReadPosRankSum=0.293;VQSLOD=3.2566;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,13:32:32.39:608,32,0	0/0:9,0:9:24:0,24,275	0/0:29,0:16:41.37:0,41,467	0/0:35,0:22:57.17:0,57,712	0/0:35,0:34:78.01:0,78,960	0/0:35,0:35:48.47:0,48,552	0/0:30,0:30:56.75:0,57,786	0/0:43,0:42:99:0,105,1327	0/0:25,0:25:56.95:0,57,643	0/0:52,0:52:99:0,132,1693	0/0:32,0:32:78.03:0,78,906	0/0:40,0:40:56.75:0,57,614	0/0:36,0:36:83.95:0,84,996	0/0:33,0:33:62.99:0,63,750	0/0:46,0:46:89.68:0,90,970	0/0:35,0:35:77.86:0,78,830	0/0:19,0:19:45.05:0,45,547	0/0:22,0:22:23.22:0,23,616	0/0:19,0:18:35.76:0,36,502	0/0:32,0:32:84.21:0,84,1071	0/0:39,0:39:99:0,105,1349	0/0:29,0:29:77.83:0,78,823	0/0:28,0:28:74.95:0,75,818	0/0:24,0:24:60.19:0,60,780	0/0:32,0:32:74.51:0,75,923	0/0:54,0:54:99:0,138,1744	0/0:29,0:29:62.88:0,63,675	0/0:18,0:18:54.12:0,54,667
chr10	85376477	.	A	AC	2599.17	PASS	AB=0.960;AC=46;AF=0.821;AN=56;BaseQRankSum=-8.961;DP=559;FS=90.040;HRun=1;HaplotypeScore=260.4187;InbreedingCoeff=-0.2123;MQ=70.65;MQ0=0;MQRankSum=6.066;QD=4.65;ReadPosRankSum=-8.431;VQSLOD=-0.5519;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:7.11:67,7,0	0/1:7,0:7:3.41:5,0,3	0/1:10,4:14:49.69:50,0,160	0/1:14,4:18:82.09:82,0,185	0/1:33,0:33:18.57:70,0,19	1/1:17,0:17:9.99:80,10,0	1/1:14,0:14:0.53:60,1,0	1/1:25,0:25:48.92:340,49,0	1/1:13,0:13:6.74:58,7,0	1/1:27,0:27:36.04:221,36,0	0/1:22,0:22:23.20:67,0,23	1/1:24,0:24:17.01:183,17,0	1/1:22,0:22:0.79:67,1,0	1/1:22,0:22:7.29:112,7,0	0/1:22,0:22:16.86:77,0,17	1/1:21,0:21:14.75:112,15,0	1/1:22,0:22:22.50:161,23,0	1/1:13,0:13:19.30:138,19,0	1/1:20,0:20:37.90:161,38,0	0/1:25,0:25:10.08:49,0,10	1/1:11,0:11:4.92:58,5,0	0/1:18,0:18:8.41:14,0,8	0/1:23,0:23:13.81:66,0,14	0/1:15,0:15:5.45:21,0,5	1/1:25,0:25:4.47:38,4,0	1/1:30,0:30:39.59:202,40,0	1/1:29,0:29:20.16:166,20,0	1/1:9,0:9:4.29:10,4,0
chr10	85377487	.	AT	A	1557.80	PASS	AB=0.889;AC=13;AF=0.232;AN=56;BaseQRankSum=8.420;DP=521;FS=1.510;HRun=11;HaplotypeScore=54.1574;InbreedingCoeff=0.8715;MQ=68.16;MQ0=1;MQRankSum=-0.224;QD=14.56;ReadPosRankSum=2.281;VQSLOD=4.0518;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:22:36.58:0,37,180	0/0:7,0:7:15.04:0,15,160	0/1:6,1:7:21.75:22,0,88	0/0:11,0:10:19.12:0,19,145	0/0:25,1:26:38.51:0,39,609	0/0:23,0:23:60.15:0,60,639	1/1:3,11:14:29.96:246,30,0	0/0:39,0:39:87.20:0,87,912	0/0:17,0:17:23.87:0,24,456	0/0:25,0:25:60.15:0,60,640	0/0:20,0:20:55.38:0,55,579	1/1:4,13:17:11.89:247,12,0	1/1:0,16:16:41.95:345,42,0	1/1:1,8:9:23.97:197,24,0	1/1:8,12:20:29.93:246,30,0	1/1:5,18:23:53.92:443,54,0	0/0:19,0:20:50.93:0,51,514	0/0:18,0:18:45.05:0,45,453	0/0:21,0:21:54.12:0,54,566	0/0:18,0:18:36.08:0,36,378	0/0:4,0:4:12.03:0,12,128	0/0:12,1:13:8.43:0,8,289	0/0:17,0:17:42.09:0,42,435	0/0:20,0:20:54.14:0,54,575	0/0:28,1:29:38.48:0,38,599	0/0:23,0:23:54.09:0,54,556	0/0:25,1:26:41.60:0,42,632	0/0:13,0:14:29.74:0,30,338
chr10	85379237	.	CACA	C	711.41	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.942;DP=525;FS=0.918;HRun=0;HaplotypeScore=88.1917;InbreedingCoeff=0.9838;MQ=91.72;MQ0=0;MQRankSum=-1.542;QD=35.57;ReadPosRankSum=0.847;VQSLOD=4.3065;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:51.17:806,51,0	0/0:8,0:8:21.05:0,21,421	0/0:28,0:28:78.25:0,78,1612	0/0:18,0:18:19.91:0,20,819	0/0:23,0:23:63.19:0,63,1307	0/0:24,0:24:69.22:0,69,1460	0/0:20,0:20:60.19:0,60,1280	0/0:31,0:31:93.30:0,93,1974	0/0:15,0:15:45.15:0,45,993	0/0:19,0:19:50.82:0,51,1055	0/0:16,0:16:48.14:0,48,980	0/0:17,0:17:48.16:0,48,1055	0/0:21,0:21:57.20:0,57,1257	0/0:17,0:17:45.14:0,45,953	0/0:18,0:18:54.17:0,54,1130	0/0:13,0:13:30.09:0,30,623	0/0:21,0:21:63.19:0,63,1308	0/0:8,0:8:24.08:0,24,522	0/0:14,0:14:39.13:0,39,842	0/0:19,0:19:54.19:0,54,1169	0/0:23,0:23:57.18:0,57,1215	0/0:18,0:18:51.18:0,51,1126	0/0:15,0:15:42.13:0,42,882	0/0:28,0:27:72.25:0,72,1566	0/0:12,0:12:30.10:0,30,624	0/0:31,0:31:90.28:0,90,1832	0/0:21,0:21:63.22:0,63,1347	0/0:7,0:7:21.07:0,21,464
chr10	85379703	.	GCTC	G	11403.26	PASS	AB=0.512;AC=25;AF=0.446;AN=56;BaseQRankSum=15.063;DP=614;FS=4.619;HRun=0;HaplotypeScore=92.7650;InbreedingCoeff=0.9264;MQ=89.81;MQ0=0;MQRankSum=-6.873;QD=45.61;ReadPosRankSum=0.769;VQSLOD=6.6540;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,3320	1/1:0,4:4:12.04:212,12,0	0/0:21,0:21:58.75:0,59,1308	0/0:30,0:30:81.19:0,81,1821	0/0:31,0:31:93.32:0,93,2175	0/0:24,0:24:72.25:0,72,1703	0/0:33,0:33:96.33:0,96,2260	1/1:3,22:25:66.20:1107,66,0	0/0:19,0:19:57.20:0,57,1317	1/1:1,16:17:48.16:832,48,0	1/1:0,20:20:51.17:899,51,0	0/0:19,0:19:57.20:0,57,1335	0/0:14,0:14:39.13:0,39,921	0/0:15,0:15:45.15:0,45,1064	1/1:1,13:14:39.13:686,39,0	1/1:0,20:20:51.17:898,51,0	0/1:1,21:22:13.77:895,0,14	0/0:18,0:18:54.19:0,54,1268	1/1:3,19:22:57.18:975,57,0	1/1:0,19:19:48.16:847,48,0	1/1:0,19:19:48.16:847,48,0	0/0:14,0:14:42.14:0,42,993	0/0:24,0:24:69.24:0,69,1631	0/0:40,0:40:99:0,120,2808	0/0:15,0:15:45.15:0,45,1055	1/1:0,29:29:87.30:1513,87,0	1/1:1,21:22:51.17:900,51,0	1/1:0,17:17:45.15:794,45,0
chr10	85382322	.	C	CAAGGCCAAGGAT	24093.76	PASS	AB=0.714;AC=55;AF=0.982;AN=56;BaseQRankSum=0.320;DP=285;FS=23.847;HRun=0;HaplotypeScore=343.5113;InbreedingCoeff=-0.0457;MQ=60.02;MQ0=0;MQRankSum=-2.262;QD=84.54;ReadPosRankSum=1.435;VQSLOD=3.8415;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:29.13:1338,29,0	1/1:3,0:3:9.03:312,9,0	1/1:3,0:6:5.89:507,6,0	0/1:3,1:5:15.29:506,0,15	1/1:13,0:13:18.06:912,18,0	1/1:5,0:5:6.02:271,6,0	1/1:12,0:12:33.11:1270,33,0	1/1:13,0:13:36.12:1339,36,0	1/1:7,0:7:12.04:649,12,0	1/1:18,0:18:48.63:1745,49,0	1/1:8,0:8:14.99:380,15,0	1/1:9,0:9:15.05:552,15,0	1/1:15,0:15:33.58:1582,34,0	1/1:12,0:12:15.05:729,15,0	1/1:12,0:12:18.06:707,18,0	1/1:11,0:11:21.07:1089,21,0	1/1:5,0:5:9.03:475,9,0	1/1:6,0:6:9.03:492,9,0	1/1:11,0:11:27.07:1014,27,0	1/1:14,0:14:33.07:1386,33,0	1/1:14,0:14:39.11:1245,39,0	1/1:7,0:7:12.04:435,12,0	1/1:12,0:12:21.52:708,22,0	1/1:10,0:10:9.03:384,9,0	1/1:6,0:6:15.04:685,15,0	1/1:12,0:12:27.09:1448,27,0	1/1:16,0:16:39.13:1775,39,0	1/1:4,0:4:3.01:158,3,0
chr10	85385415	.	CGT	C	743.56	PASS	AB=0.916;AC=23;AF=0.479;AN=48;BaseQRankSum=2.710;DP=621;FS=0.687;HRun=0;HaplotypeScore=101.3180;InbreedingCoeff=0.2917;MQ=64.02;MQ0=13;MQRankSum=-0.226;QD=2.35;ReadPosRankSum=1.086;VQSLOD=1.8811;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:38:0.47:0,0,1	./.	./.	./.	0/1:15,0:15:11.07:11,0,236	0/1:21,1:22:14.18:14,0,198	0/1:18,0:27:16.61:19,0,17	0/0:29,0:29:0:0,0,0	0/0:19,0:19:0.36:0,0,193	0/0:19,0:19:16.37:0,16,143	0/0:12,0:13:3:0,3,26	1/1:26,1:34:8.35:59,8,0	1/1:13,0:20:8.52:42,9,0	1/1:18,0:22:16.44:75,16,0	1/1:24,7:32:17.54:154,18,0	0/1:17,4:24:3.61:118,0,4	0/0:21,0:32:17.93:0,18,155	0/0:21,0:20:21.04:0,21,362	./.	0/1:12,0:12:29.38:92,0,29	1/1:29,2:30:3.43:33,3,0	0/1:18,0:19:1.12:1,0,329	0/1:16,0:16:11.18:11,0,182	0/0:19,0:31:30.01:0,30,295	0/0:17,0:17:33.09:0,33,433	1/1:14,0:14:8.97:77,9,0	1/1:13,5:17:10.14:100,10,0	1/1:4,4:8:9.02:93,9,0
chr10	85386109	.	C	CAG	10997.24	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-16.041;DP=561;FS=1.971;HRun=0;HaplotypeScore=64.5809;InbreedingCoeff=0.9455;MQ=90.01;MQ0=0;MQRankSum=-1.358;QD=43.30;ReadPosRankSum=0.961;VQSLOD=6.4558;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,108,1406	1/1:0,2:2:3.01:54,3,0	0/0:18,0:18:45.11:0,45,594	0/0:24,0:24:60.20:0,60,833	0/0:14,0:14:39.10:0,39,511	0/0:14,0:14:39.13:0,39,546	0/0:28,0:28:84.23:0,84,1121	1/1:2,33:37:81.48:1502,81,0	0/0:25,0:25:72.23:0,72,990	1/1:2,6:8:18.06:324,18,0	1/1:2,11:13:36.12:641,36,0	0/0:21,0:21:57.19:0,57,797	0/0:21,0:21:57.15:0,57,742	0/0:10,0:10:30.10:0,30,420	0/0:23,0:23:66.21:0,66,908	0/0:14,0:14:39.13:0,39,546	1/1:3,33:36:90.31:1619,90,0	1/1:1,32:33:66.23:1188,66,0	1/1:3,18:22:60.20:1025,60,0	1/1:2,17:19:48.16:864,48,0	1/1:4,37:42:96.33:1729,96,0	0/0:4,0:4:12.04:0,12,168	0/0:14,0:14:39.12:0,39,529	0/0:24,0:24:66.19:0,66,887	0/0:13,0:13:39.12:0,39,530	1/1:2,18:20:54.19:972,54,0	1/1:0,21:21:57.20:1025,57,0	1/1:0,1:1:3.01:54,3,0
chr10	85387437	.	G	GA	8611.44	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-16.424;DP=655;FS=14.715;HRun=6;HaplotypeScore=61.7609;InbreedingCoeff=0.9956;MQ=86.88;MQ0=1;MQRankSum=-3.537;QD=33.38;ReadPosRankSum=-1.213;VQSLOD=3.1612;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,1039	1/1:0,4:4:12.04:151,12,0	0/0:26,0:26:56.73:0,57,524	0/0:29,1:28:49.26:0,49,528	0/0:34,0:34:99:0,99,985	0/0:22,0:21:60.13:0,60,612	0/0:19,0:19:48.10:0,48,489	1/1:3,24:27:75.21:914,75,0	0/0:17,0:17:48.11:0,48,489	1/1:2,24:26:72.23:899,72,0	1/1:3,22:25:62.30:788,62,0	0/0:28,0:28:78.17:0,78,795	0/0:25,0:25:69.15:0,69,703	0/0:21,0:21:60.12:0,60,607	0/0:29,0:29:78.08:0,78,775	0/0:25,0:25:72.15:0,72,728	1/1:0,31:31:90.29:1132,90,0	1/1:3,18:21:45.14:566,45,0	1/1:1,26:27:78.25:980,78,0	1/1:4,19:23:57.18:717,57,0	1/1:0,12:12:36.12:453,36,0	0/0:19,0:19:51.12:0,51,520	0/0:23,0:23:63.14:0,63,643	0/0:28,0:28:75.15:0,75,757	0/0:13,0:13:36.08:0,36,367	1/1:4,26:30:75.21:917,75,0	1/1:0,19:19:51.16:642,51,0	1/1:1,12:13:36.12:453,36,0
chr10	85387755	.	GA	G	9143.76	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=10.077;DP=549;FS=0.368;HRun=8;HaplotypeScore=63.9833;InbreedingCoeff=0.9988;MQ=75.86;MQ0=0;MQRankSum=-1.882;QD=24.00;ReadPosRankSum=0.619;VQSLOD=5.3895;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:21:48.08:464,48,0	1/1:1,12:13:33.05:319,33,0	0/0:17,0:17:29.99:0,30,323	0/0:17,0:17:22.34:0,22,204	0/0:18,0:18:45.13:0,45,533	0/0:33,0:33:93.29:0,93,1123	1/1:3,14:17:36.05:348,36,0	1/1:3,22:25:63.08:603,63,0	0/0:12,0:12:30.09:0,30,362	1/1:2,18:20:48.06:459,48,0	1/1:2,21:23:63.05:599,63,0	1/1:2,20:22:51.08:493,51,0	1/1:5,14:19:42.06:406,42,0	1/1:0,9:9:24.04:232,24,0	1/1:4,19:23:51.08:493,51,0	1/1:1,11:12:33.05:319,33,0	1/1:3,27:30:81.13:782,81,0	1/1:0,25:25:72.12:695,72,0	1/1:4,18:22:54.08:521,54,0	1/1:3,25:28:62.99:595,63,0	1/1:0,11:11:30.05:290,30,0	0/0:17,0:17:51.14:0,51,604	0/0:24,0:24:63.19:0,63,761	0/0:15,0:14:45.14:0,45,544	0/0:14,0:15:41.99:0,42,486	1/1:1,23:24:69.09:659,69,0	1/1:5,22:27:60.09:579,60,0	1/1:0,10:10:30.05:290,30,0
chr10	85390047	.	CTCTCTCTT	C	1091.34	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-3.185;DP=490;FS=2.174;HRun=0;HaplotypeScore=147.8664;InbreedingCoeff=0.0230;MQ=47.20;MQ0=15;MQRankSum=-3.045;QD=4.85;ReadPosRankSum=-5.063;VQSLOD=0.9776;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:18:4.93:5,0,325	0/1:4,0:4:16.35:16,0,109	0/0:22,0:5:2.04:0,2,6	0/0:19,0:6:3.27:0,3,14	0/0:16,0:16:24.02:0,24,640	0/0:28,0:28:39.15:0,39,1892	0/0:22,0:21:21.50:0,21,477	0/1:26,0:26:65.30:65,0,412	0/0:19,0:19:29.68:0,30,880	0/0:12,0:12:3.03:0,3,327	0/0:16,0:16:8.51:0,9,179	1/1:17,3:19:23.85:387,24,0	1/1:17,0:17:20.94:369,21,0	1/1:11,1:11:14.28:216,14,0	0/1:19,0:18:9.91:10,0,288	0/0:16,0:15:0.07:0,0,257	0/0:13,0:12:6.11:0,6,261	0/1:17,0:17:5.42:5,0,577	0/1:12,0:12:38.49:38,0,194	0/1:14,0:14:10.03:10,0,217	0/1:11,0:10:7.67:8,0,223	0/0:19,0:18:27.97:0,28,858	0/0:27,0:26:29.93:0,30,1365	0/0:16,0:15:39.08:0,39,1226	0/0:20,0:20:27.06:0,27,886	0/1:26,0:26:37.95:38,0,922	0/1:20,0:20:72.27:72,0,453	0/1:8,0:6:14.02:14,0,85
chr10	85390055	.	T	TCTCTC	1583	PASS	AB=0.974;AC=21;AF=0.375;AN=56;BaseQRankSum=4.935;DP=459;FS=19.993;HRun=0;HaplotypeScore=137.5668;InbreedingCoeff=-0.1025;MQ=44.86;MQ0=9;MQRankSum=-0.465;QD=6.18;ReadPosRankSum=3.655;VQSLOD=1.3942;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:17:24.96:25,0,38	0/1:4,0:4:19.80:45,0,20	1/1:10,0:3:0.43:1,0,0	0/0:9,0:4:6.01:0,6,64	0/0:17,0:17:20.55:0,21,362	0/0:27,0:27:59.80:0,60,1123	0/1:19,0:18:29.93:142,0,30	0/1:25,0:25:59.92:60,0,201	0/0:17,0:17:25.80:0,26,521	0/1:12,0:12:72.79:92,0,73	1/1:16,0:16:4.45:26,4,0	0/0:19,0:18:23.97:0,24,268	0/0:18,0:18:6.48:0,6,227	0/0:12,0:11:14.57:0,15,164	1/1:15,2:16:1.35:132,1,0	0/1:16,2:17:18.56:88,0,19	0/1:10,0:10:13.07:61,0,13	0/1:14,0:14:37.17:157,0,37	0/1:10,0:10:43.46:43,0,90	1/1:13,0:15:7.82:142,8,0	0/1:13,0:13:3.17:71,0,3	0/0:22,0:21:28.25:0,28,560	0/0:26,0:26:40.18:0,40,793	0/0:19,0:17:40.31:0,40,733	0/0:17,0:17:27.34:0,27,505	0/1:26,1:27:99:418,0,118	0/1:18,0:19:54.27:204,0,54	0/1:6,0:5:34.67:37,0,35
chr10	85390066	.	TCACACACA	T	230.20	PASS	AB=0.950;AC=5;AF=0.100;AN=50;BaseQRankSum=3.560;DP=452;FS=1.106;HRun=0;HaplotypeScore=162.5828;InbreedingCoeff=0.0242;MQ=40.12;MQ0=23;MQRankSum=-3.560;QD=2.95;ReadPosRankSum=1.458;VQSLOD=2.7194;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:5.99:0,6,86	./.	./.	./.	0/0:20,0:18:6.02:0,6,163	0/0:24,0:23:20.09:0,20,461	0/0:16,0:17:0.47:0,0,1	0/0:21,0:21:15.04:0,15,240	0/0:17,0:17:18.06:0,18,486	0/1:6,3:9:51.43:241,0,51	0/0:18,1:18:5.75:0,6,49	0/1:20,0:18:24.72:29,0,25	0/1:20,0:20:33.76:34,0,43	0/0:11,0:10:6.89:0,7,67	0/0:21,0:17:8.70:0,9,131	0/0:19,0:18:26.55:0,27,397	0/1:12,0:10:11.04:28,0,11	0/0:11,0:10:6.02:0,6,156	0/0:11,0:11:12.02:0,12,223	0/0:17,0:17:0.46:0,0,1	0/0:15,0:13:1.25:0,1,3	0/0:24,0:23:21.05:0,21,567	0/0:28,0:28:12.04:0,12,326	0/0:14,0:12:15.05:0,15,226	0/0:17,0:16:21.07:0,21,527	0/0:32,0:30:68.51:0,69,1434	0/1:17,0:17:6.55:7,0,222	0/0:7,0:6:14.54:0,15,181
chr10	85390097	.	CACACAGAGAGAGAGAGAGAGAG	C	1244.11	PASS	AB=1.000;AC=9;AF=0.173;AN=52;BaseQRankSum=4.490;DP=483;FS=0.887;HRun=0;HaplotypeScore=229.4781;InbreedingCoeff=0.4404;MQ=38.34;MQ0=32;MQRankSum=-4.369;QD=11.41;ReadPosRankSum=0.266;VQSLOD=2.6324;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,13:26:2.97:0,3,20	0/0:4,0:4:3.01:0,3,217	./.	./.	0/0:23,0:21:15.05:0,15,881	0/0:18,0:17:23.33:0,23,997	1/1:13,0:10:1.61:107,2,0	0/0:21,0:19:29.80:0,30,580	0/0:19,0:19:24.99:0,25,1269	0/0:13,0:13:4.50:0,4,1726	0/0:21,0:19:15.02:0,15,881	1/1:19,0:17:11.47:187,11,0	1/1:24,0:24:19.49:440,19,0	0/1:14,0:12:0.08:0,0,1	0/1:22,0:19:99:198,0,258	0/1:17,0:16:99:445,0,186	0/0:13,0:11:19.62:0,20,1062	0/0:8,0:7:12.03:0,12,413	0/0:15,0:15:25.27:0,25,827	0/0:11,0:11:10.06:0,10,372	0/0:16,0:12:4.69:0,5,130	0/0:27,0:25:24.08:0,24,1259	0/0:30,0:30:15.30:0,15,641	0/0:18,0:16:4.43:0,4,659	0/0:19,0:16:21.97:0,22,1208	0/0:43,0:40:99:0,113,4390	0/0:18,0:19:35.81:0,36,1583	0/0:8,0:6:14.98:0,15,495
chr10	85390101	.	CAGAGAGAGAGAGAGAGAGAG	C	1399.51	PASS	AB=0.799;AC=9;AF=0.180;AN=50;BaseQRankSum=3.017;DP=489;FS=7.615;HRun=0;HaplotypeScore=216.6311;InbreedingCoeff=0.4049;MQ=38.78;MQ0=32;MQRankSum=-3.003;QD=12.84;ReadPosRankSum=1.608;VQSLOD=1.8634;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:3,0:3:3.01:0,3,242	./.	./.	0/0:24,0:22:15.05:0,15,1148	0/0:21,0:20:25.15:0,25,1589	1/1:10,0:12:1.59:90,2,0	0/0:21,0:19:26.92:0,27,802	0/0:19,0:19:15.99:0,16,1196	0/0:15,0:15:39.13:0,39,2258	0/0:23,0:21:15.05:0,15,1204	1/1:12,8:18:3.01:158,3,0	1/1:14,9:24:9.03:456,9,0	0/1:11,2:12:0.17:0,0,1	0/1:15,3:17:99:238,0,231	0/1:12,2:16:25.18:582,0,25	0/0:14,0:12:19.88:0,20,1186	0/0:8,0:7:6.02:0,6,387	0/0:17,0:17:29.31:0,29,1200	0/0:12,0:12:13.94:0,14,535	0/0:16,0:12:4.71:0,5,154	0/0:27,0:25:15.05:0,15,1111	0/0:20,0:29:6.18:0,6,537	0/0:19,0:17:12.51:0,13,968	0/0:15,0:12:15.98:0,16,1120	0/0:43,0:40:84.29:0,84,4186	0/0:18,0:18:35.81:0,36,1647	0/0:8,0:6:8.77:0,9,433
chr10	85390229	.	A	ACC	2584.99	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.518;DP=649;FS=5.395;HRun=1;HaplotypeScore=82.0160;InbreedingCoeff=0.8970;MQ=70.67;MQ0=0;MQRankSum=1.965;QD=50.69;ReadPosRankSum=2.896;VQSLOD=3.6306;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,1922	0/0:14,0:14:39.13:0,39,592	0/0:16,0:15:42.01:0,42,588	0/0:17,0:17:1.49:0,1,455	0/0:20,0:19:51.64:0,52,781	0/0:32,0:32:81.25:0,81,1188	0/0:27,0:27:75.23:0,75,1104	0/0:27,0:27:78.25:0,78,1151	0/0:21,0:21:60.20:0,60,918	0/0:20,0:20:60.20:0,60,900	0/0:13,0:13:39.13:0,39,597	0/0:30,0:30:87.28:0,87,1308	0/0:20,0:20:57.19:0,57,870	0/0:28,0:28:81.26:0,81,1218	1/1:3,29:32:93.32:1779,93,0	1/1:0,19:19:48.16:927,48,0	0/0:31,0:31:84.28:0,84,1283	0/0:19,0:19:57.17:0,57,845	0/0:24,0:24:63.18:0,63,902	0/0:20,0:20:54.15:0,54,782	0/0:35,0:35:99:0,102,1469	0/0:20,0:20:60.19:0,60,896	0/0:18,0:18:51.16:0,51,759	0/0:23,0:23:69.23:0,69,1054	0/0:16,0:16:48.16:0,48,734	0/0:30,0:30:84.24:0,84,1223	0/0:24,0:24:72.24:0,72,1101	0/0:8,0:8:24.08:0,24,367
chr10	85390524	.	C	CT	1158.27	PASS	AB=0.828;AC=21;AF=0.375;AN=56;BaseQRankSum=-0.713;DP=462;FS=2.585;HRun=13;HaplotypeScore=70.6054;InbreedingCoeff=0.2704;MQ=60.55;MQ0=6;MQRankSum=-4.738;QD=4.87;ReadPosRankSum=-5.289;VQSLOD=0.7442;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:33:49.20:0,49,336	0/0:9,0:8:5.88:0,6,41	0/1:8,2:10:16.01:16,0,49	0/0:2,0:2:2.96:0,3,19	0/1:8,0:11:5.05:5,0,43	0/0:17,1:19:3.86:0,4,161	0/0:16,1:18:9.34:0,9,203	0/1:16,7:23:23.99:194,0,24	0/1:4,0:5:0:0,0,0	0/0:17,0:17:20.73:0,21,144	0/0:11,0:12:10.78:0,11,65	1/1:13,0:17:23.91:126,24,0	1/1:5,0:11:8.69:48,9,0	1/1:8,0:18:11.51:61,12,0	0/0:3,0:8:4.04:0,4,12	0/0:6,0:17:16.10:0,16,47	0/0:22,0:26:57.29:0,57,347	0/1:22,3:23:11.16:11,0,221	0/1:12,6:17:41.05:75,0,41	1/1:7,9:16:4.28:168,4,0	0/1:5,7:12:17.14:143,0,17	0/0:16,0:17:22.32:0,22,138	0/1:15,1:19:6.85:7,0,92	0/0:22,0:24:57.60:0,58,382	0/0:17,0:19:15.71:0,16,94	1/1:12,9:18:18.32:284,18,0	0/1:7,12:20:44.65:72,0,45	1/1:3,6:9:14.85:126,15,0
chr10	85391595	.	GA	G	920.97	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.141;DP=633;FS=15.993;HRun=9;HaplotypeScore=71.0069;InbreedingCoeff=0.9286;MQ=79.45;MQ0=0;MQRankSum=-0.072;QD=18.80;ReadPosRankSum=1.465;VQSLOD=2.6511;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,1139	0/0:6,1:7:12.04:0,12,139	0/0:22,2:23:8.54:0,9,289	0/0:16,0:15:10.88:0,11,127	0/0:27,0:27:72.19:0,72,812	0/0:25,0:25:72.08:0,72,793	0/0:18,0:18:48.13:0,48,545	0/0:36,0:39:86.92:0,87,942	0/0:15,1:16:17.72:0,18,457	0/0:22,0:22:62.94:0,63,727	0/0:21,0:21:63.15:0,63,697	0/0:25,1:26:44.75:0,45,761	0/0:15,0:15:33.09:0,33,373	0/0:25,0:25:69.20:0,69,795	1/1:1,22:23:60.03:549,60,0	1/1:5,21:26:53.96:494,54,0	0/0:29,0:29:81.16:0,81,898	0/0:21,0:21:57.16:0,57,649	0/0:19,0:19:48.13:0,48,545	0/0:16,0:16:48.14:0,48,553	0/0:33,0:33:96.25:0,96,1081	0/0:13,0:14:38.94:0,39,422	0/0:20,0:20:39.55:0,40,435	0/0:22,0:22:66.18:0,66,751	0/0:22,0:22:56.72:0,57,635	0/0:35,0:36:93.10:0,93,1043	0/0:27,0:27:75.17:0,75,831	0/0:7,0:7:21.06:0,21,242
chr10	85393351	.	C	CTTCTT	1470.01	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=-1.883;DP=638;FS=18.377;HRun=0;HaplotypeScore=127.9567;InbreedingCoeff=0.6607;MQ=67.02;MQ0=3;MQRankSum=-4.304;QD=21.30;ReadPosRankSum=0.263;VQSLOD=2.3442;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:32:78.05:0,78,1485	0/0:14,0:14:36.06:0,36,615	0/0:25,0:21:49.22:0,49,371	0/1:14,0:10:10.13:10,0,261	0/0:20,0:20:50.78:0,51,891	0/0:20,0:21:63.02:0,63,906	0/0:20,0:20:43.77:0,44,800	0/0:30,0:30:83.31:0,83,1178	0/0:27,0:27:78.22:0,78,1387	0/0:28,0:28:81.16:0,81,1424	0/0:22,0:23:61.86:0,62,981	0/0:25,0:25:65.32:0,65,988	0/0:19,0:19:46.83:0,47,861	0/0:16,0:16:45.10:0,45,684	1/1:1,15:18:27.09:701,27,0	1/1:2,20:30:32.54:883,33,0	0/0:34,0:36:99:0,99,1766	0/0:31,0:31:87.06:0,87,1451	0/0:21,0:22:66.16:0,66,1012	0/0:16,0:16:45.04:0,45,728	0/0:24,0:24:66.13:0,66,1115	0/0:22,0:24:55.94:0,56,977	0/0:25,0:26:75.15:0,75,1275	0/0:28,0:29:77.78:0,78,1276	0/0:14,0:15:29.85:0,30,612	0/0:19,0:20:48.85:0,49,726	0/0:23,0:25:63.09:0,63,1139	0/1:6,0:6:7:7,0,180
chr10	85393584	.	TCA	T	3942.64	PASS	AB=0.950;AC=31;AF=0.554;AN=56;BaseQRankSum=8.604;DP=427;FS=11.832;HRun=0;HaplotypeScore=69.3570;InbreedingCoeff=0.6490;MQ=79.62;MQ0=1;MQRankSum=-3.571;QD=12.40;ReadPosRankSum=4.817;VQSLOD=2.1267;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,1:28:8.78:119,9,0	0/1:9,2:11:81.66:82,0,85	0/0:19,0:18:10.10:0,10,390	0/0:16,0:15:25.99:0,26,317	0/0:10,0:10:24.07:0,24,316	0/0:10,0:10:20.81:0,21,186	1/1:21,4:25:24:275,24,0	1/1:21,0:21:41.91:353,42,0	0/0:10,0:10:21.02:0,21,265	0/1:17,0:17:3.92:84,0,4	0/1:10,0:10:27.92:37,0,28	1/1:22,0:22:50.94:442,51,0	1/1:21,0:21:48.02:432,48,0	1/1:16,0:16:45.01:408,45,0	0/0:11,0:11:17.68:0,18,161	0/0:13,0:13:24.03:0,24,297	0/1:30,1:31:3.20:204,0,3	1/1:16,0:16:30.01:271,30,0	1/1:14,0:14:29.88:241,30,0	1/1:9,0:9:18.01:164,18,0	1/1:25,0:25:18.01:165,18,0	0/0:6,0:6:12.01:0,12,141	0/0:4,0:4:9.01:0,9,115	0/1:13,1:14:6.64:7,0,370	0/0:10,0:10:24:0,24,301	1/1:16,0:16:9.04:232,9,0	1/1:18,0:18:41.72:335,42,0	1/1:4,0:4:11.94:91,12,0
chr10	85393587	.	CACA	C	2882.12	PASS	AB=0.981;AC=21;AF=0.375;AN=56;BaseQRankSum=7.046;DP=416;FS=24.207;HRun=0;HaplotypeScore=79.2464;InbreedingCoeff=0.5763;MQ=80.29;MQ0=1;MQRankSum=-2.777;QD=12.64;ReadPosRankSum=7.008;VQSLOD=1.0860;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:28:16.24:16,0,54	0/0:12,0:12:31.97:0,32,385	0/0:19,0:18:45.26:0,45,801	0/0:15,0:14:35.67:0,36,608	0/0:10,0:10:24.08:0,24,480	0/0:9,0:10:27.03:0,27,393	0/1:25,0:25:1.71:2,0,25	0/1:19,0:19:61.50:62,0,68	0/0:8,0:8:21.07:0,21,405	0/0:16,0:17:47.60:0,48,494	0/0:10,0:10:24.01:0,24,257	1/1:21,2:23:47.88:520,48,0	1/1:20,1:21:48.11:555,48,0	1/1:16,0:16:42.55:436,43,0	0/0:12,0:12:17.88:0,18,311	0/0:12,0:12:30.09:0,30,534	0/0:29,0:29:78.24:0,78,736	1/1:13,2:15:30.04:348,30,0	0/1:13,0:13:36.48:168,0,36	1/1:8,2:10:17.95:198,18,0	1/1:21,2:23:0.09:171,0,0	0/0:6,0:6:12.04:0,12,239	0/0:4,0:4:9.03:0,9,179	0/0:14,0:14:36.59:0,37,656	0/0:10,0:10:27.08:0,27,498	0/1:14,1:15:45.42:68,0,45	1/1:10,6:16:34.46:450,34,0	1/1:4,0:4:6.96:85,7,0
chr10	85393588	.	ACAC	A	5417.98	PASS	AB=0.967;AC=25;AF=0.446;AN=56;BaseQRankSum=1.394;DP=413;FS=10.792;HRun=0;HaplotypeScore=70.0181;InbreedingCoeff=0.9008;MQ=81.49;MQ0=1;MQRankSum=-2.946;QD=24.08;ReadPosRankSum=3.029;VQSLOD=3.6460;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,1:29:20.94:30,0,21	0/0:12,0:12:22.22:0,22,190	0/0:20,0:19:44.68:0,45,533	0/0:15,0:14:26.07:0,26,372	0/0:10,0:10:24.07:0,24,409	0/0:10,0:10:23.86:0,24,258	1/1:24,0:24:22.29:132,22,0	1/1:14,4:19:41.93:408,42,0	0/0:8,0:8:21.04:0,21,336	0/0:17,0:17:39.49:0,39,168	0/0:10,0:10:21.37:0,21,107	1/1:2,21:23:51.08:810,51,0	1/1:1,20:21:48.16:825,48,0	1/1:0,16:16:45.11:752,45,0	0/0:12,0:12:17.81:0,18,210	0/0:11,0:11:27.04:0,27,407	0/0:30,0:30:48.46:0,48,267	1/1:2,12:15:30.10:498,30,0	1/1:3,9:12:29.91:339,30,0	1/1:2,7:10:18.06:292,18,0	1/1:4,16:22:18.05:313,18,0	0/0:6,0:6:12.03:0,12,184	0/0:4,0:4:9.01:0,9,142	0/0:14,0:14:31.80:0,32,545	0/0:9,0:9:24:0,24,378	1/1:2,11:14:11.98:306,12,0	1/1:11,5:16:41.91:571,42,0	1/1:4,0:4:11.97:140,12,0
chr10	85393589	.	CA	C	2662.81	PASS	AB=0.714;AC=26;AF=0.464;AN=56;BaseQRankSum=7.569;DP=410;FS=15.732;HRun=1;HaplotypeScore=67.8031;InbreedingCoeff=0.8006;MQ=82.53;MQ0=1;MQRankSum=-4.024;QD=11.73;ReadPosRankSum=3.331;VQSLOD=0.6049;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:3,25:28:8.55:46,0,9	0/0:12,0:12:7.06:0,7,151	0/0:21,0:20:25.24:0,25,405	0/0:15,0:14:22.06:0,22,252	0/0:11,0:11:1.75:0,2,190	0/1:8,1:9:12.96:13,0,91	1/1:5,19:24:23.74:195,24,0	1/1:15,1:16:41.84:336,42,0	0/0:8,0:8:20.69:0,21,201	0/0:17,0:17:36.25:0,36,243	0/0:10,0:10:22.53:0,23,130	1/1:23,0:23:50.53:355,51,0	1/1:21,0:21:47.58:339,48,0	1/1:16,0:16:44.71:326,45,0	0/0:12,0:12:17.62:0,18,136	0/0:11,0:11:26.54:0,27,244	0/0:30,0:30:55.11:0,55,339	1/1:15,0:15:29.77:213,30,0	1/1:9,1:10:29.78:218,30,0	1/1:10,0:10:17.87:129,18,0	1/1:20,1:21:17.88:130,18,0	0/0:7,0:7:11.98:0,12,113	0/0:5,0:5:12:0,12,116	0/0:15,0:15:26.96:0,27,344	0/0:9,0:9:23.89:0,24,214	1/1:14,0:14:8.56:214,9,0	1/1:15,1:16:40.99:288,41,0	1/1:4,0:4:11.86:81,12,0
chr10	85393590	.	ACC	A	2404.62	PASS	AB=0.971;AC=32;AF=0.571;AN=56;BaseQRankSum=6.779;DP=415;FS=8.732;HRun=11;HaplotypeScore=74.7632;InbreedingCoeff=0.6499;MQ=81.30;MQ0=1;MQRankSum=-2.527;QD=7.78;ReadPosRankSum=6.555;VQSLOD=-0.2476;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:27.07:27,0,66	1/1:9,3:12:20.98:209,21,0	0/0:19,0:19:15.67:0,16,159	0/0:15,0:14:12.74:0,13,156	0/0:11,0:11:24.02:0,24,285	0/0:7,0:9:16.49:0,16,123	0/1:26,0:26:22.39:49,0,22	1/1:16,0:16:8.02:39,8,0	0/0:8,0:8:15.03:0,15,205	1/1:3,14:17:42.08:440,42,0	1/1:2,8:10:18.04:192,18,0	1/1:23,0:23:39.19:158,39,0	1/1:21,0:21:42.05:167,42,0	1/1:16,0:16:37.44:152,37,0	0/0:13,0:13:5.79:0,6,74	0/0:8,0:9:18.04:0,18,219	1/1:4,25:30:71.89:743,72,0	1/1:15,0:15:26.10:109,26,0	1/1:10,0:10:10.40:41,10,0	1/1:11,0:11:16.06:69,16,0	1/1:22,0:22:15.87:63,16,0	0/0:7,0:7:9:0,9,97	0/0:5,0:5:9.01:0,9,98	0/1:13,1:15:28.28:28,0,306	0/0:9,0:9:17.98:0,18,187	0/1:14,0:14:2.15:29,0,2	1/1:16,0:16:21.10:82,21,0	1/1:4,0:4:4.14:15,4,0
chr10	85393601	.	C	CCA	542.99	PASS	AB=0.531;AC=7;AF=0.125;AN=56;BaseQRankSum=-1.780;DP=456;FS=2.232;HRun=0;HaplotypeScore=107.3677;InbreedingCoeff=0.6894;MQ=77.69;MQ0=1;MQRankSum=-0.078;QD=6.54;ReadPosRankSum=-4.041;VQSLOD=2.5367;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:21.90:315,22,0	0/0:9,0:9:23.74:0,24,180	0/0:16,0:17:31.95:0,32,276	0/0:13,0:13:12.37:0,12,110	0/0:14,0:14:21.14:0,21,251	0/0:11,0:12:20.94:0,21,177	1/1:20,0:20:27.20:249,27,0	0/0:13,0:13:23.90:0,24,202	0/0:6,0:6:2.96:0,3,40	0/0:20,0:20:56.79:0,57,452	0/0:12,0:12:23.66:0,24,171	0/0:23,0:23:53.96:0,54,507	0/0:22,0:22:56.27:0,56,521	0/0:19,0:19:51.06:0,51,501	0/1:2,13:17:12.21:48,0,12	1/1:4,1:18:5.93:71,6,0	0/0:34,0:34:80.72:0,81,623	0/0:19,0:19:45:0,45,421	0/0:14,0:14:27:0,27,245	0/0:19,0:19:29.93:0,30,268	0/0:26,0:26:41.95:0,42,378	0/0:13,0:13:6:0,6,65	0/0:8,0:8:14.99:0,15,139	0/0:16,0:16:20.94:0,21,215	0/0:9,0:9:11.98:0,12,114	0/0:15,0:15:29.94:0,30,258	0/0:16,0:16:37.16:0,37,307	0/0:2,0:2:6.02:0,6,67
chr10	85393999	.	GTTT	G	2982.93	PASS	AB=0.683;AC=29;AF=0.518;AN=56;BaseQRankSum=3.935;DP=505;FS=14.411;HRun=14;HaplotypeScore=123.2436;InbreedingCoeff=0.4033;MQ=64.52;MQ0=9;MQRankSum=-6.528;QD=10.58;ReadPosRankSum=3.862;VQSLOD=-0.0212;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:14:8.61:89,0,9	1/1:12,1:13:13.43:158,13,0	0/0:38,0:15:13.81:0,14,76	0/0:39,0:16:14.13:0,14,194	0/0:18,0:20:53.99:0,54,749	0/0:15,0:16:40.34:0,40,628	1/1:6,0:10:12.68:68,13,0	1/1:13,0:25:4.91:219,5,0	0/0:17,0:16:37.66:0,38,617	1/1:11,12:23:0.71:427,1,0	1/1:4,12:16:30.59:352,31,0	1/1:4,4:8:0.92:125,1,0	1/1:11,8:18:19.99:293,20,0	0/1:10,9:20:6.83:316,0,7	0/1:11,0:16:20.12:20,0,29	0/0:3,0:15:37.28:0,37,171	1/1:13,6:20:1.36:278,1,0	0/1:6,0:14:84.18:105,0,84	0/1:6,0:11:50.51:51,0,65	0/1:9,0:15:63.81:71,0,64	0/1:7,0:12:4.83:5,0,29	0/0:7,0:10:30.01:0,30,403	0/0:14,0:15:40.59:0,41,520	0/0:22,0:23:63.15:0,63,979	0/0:23,0:26:68.82:0,69,1012	1/1:6,14:20:21.92:390,22,0	1/1:7,0:15:17.24:163,17,0	1/1:3,0:3:8.71:47,9,0
chr10	85394014	.	G	GGGT	536.01	PASS	AB=0.932;AC=6;AF=0.107;AN=56;BaseQRankSum=5.663;DP=579;FS=3.828;HRun=0;HaplotypeScore=167.4554;InbreedingCoeff=-0.1176;MQ=56.53;MQ0=16;MQRankSum=-3.178;QD=2.90;ReadPosRankSum=-3.383;VQSLOD=1.6749;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:37.02:0,37,474	0/1:9,4:14:99:284,0,119	0/1:52,0:15:13.21:13,0,135	0/1:46,0:17:4.67:5,0,176	0/0:21,0:21:63.22:0,63,1137	0/0:20,0:20:60.15:0,60,1022	0/0:6,0:6:18.02:0,18,206	0/0:35,0:29:78.08:0,78,1103	0/0:17,0:16:39.13:0,39,688	0/1:25,2:26:99:169,0,526	0/1:19,1:19:99:101,0,354	0/0:11,0:11:28.62:0,29,394	0/0:14,0:13:39.13:0,39,597	0/0:23,0:24:54.12:0,54,777	0/0:13,0:13:26.64:0,27,294	0/0:17,0:17:32.69:0,33,652	0/1:22,1:22:83.07:83,0,516	0/0:17,0:17:35.56:0,36,580	0/0:26,0:23:57.16:0,57,738	0/0:13,0:13:33.06:0,33,415	0/0:12,0:12:16.27:0,16,252	0/0:12,0:12:36.12:0,36,652	0/0:18,0:17:51.15:0,51,862	0/0:29,0:28:84.26:0,84,1437	0/0:21,0:21:61.76:0,62,1065	0/0:23,0:23:10.10:0,10,684	0/0:22,0:21:48.13:0,48,610	0/0:4,0:4:12:0,12,130
chr10	85394023	.	G	GT	510.70	PASS	AB=0.961;AC=12;AF=0.214;AN=56;BaseQRankSum=8.760;DP=586;FS=1.689;HRun=9;HaplotypeScore=140.1120;InbreedingCoeff=0.0803;MQ=52.77;MQ0=20;MQRankSum=-9.194;QD=3.40;ReadPosRankSum=2.904;VQSLOD=0.2337;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,7:18:11.58:226,12,0	0/1:14,0:13:7.35:7,0,34	0/0:55,0:16:4.42:0,4,78	0/0:41,0:13:0.20:0,0,49	0/0:21,1:22:26.79:0,27,457	0/0:22,0:21:56.92:0,57,487	1/1:3,3:6:7.87:97,8,0	0/0:37,0:31:38.50:0,38,315	0/0:15,0:14:22.48:0,22,217	0/1:28,0:28:22.28:75,0,22	0/1:16,0:18:11.02:11,0,33	0/0:15,0:15:16.12:0,16,121	0/0:14,0:13:20.18:0,20,162	0/0:25,0:25:36.40:0,36,305	0/0:9,0:9:6.27:0,6,40	0/0:16,0:16:11.14:0,11,83	0/1:22,0:21:24.07:24,0,30	0/1:11,5:16:37.26:144,0,37	0/0:32,0:29:18.14:0,18,277	0/1:12,0:12:16.69:17,0,129	0/1:11,1:11:36.14:44,0,36	0/0:15,0:15:41.96:0,42,356	0/0:21,0:20:53.98:0,54,467	0/0:30,0:29:73.27:0,73,606	0/0:20,0:20:49.78:0,50,419	0/0:22,0:22:29.58:0,30,268	0/0:23,0:22:24.74:0,25,197	0/1:2,0:2:16.59:17,0,20
chr10	85394033	.	G	GGTT	3169.34	PASS	AB=0.918;AC=15;AF=0.268;AN=56;BaseQRankSum=5.411;DP=543;FS=1.912;HRun=0;HaplotypeScore=136.5239;InbreedingCoeff=-0.1773;MQ=53.39;MQ0=17;MQRankSum=-9.282;QD=12.43;ReadPosRankSum=1.592;VQSLOD=3.6834;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:8.27:78,0,8	0/1:13,3:15:86.46:318,0,86	0/0:46,0:16:10.38:0,10,264	0/1:38,0:11:5.34:5,0,80	0/0:24,0:24:69.18:0,69,1103	0/0:23,0:22:66.18:0,66,1107	0/1:7,0:7:20.08:51,0,20	0/0:30,0:26:31.08:0,31,333	0/0:12,0:11:32.84:0,33,487	1/1:12,18:29:9.67:1320,10,0	0/1:9,11:20:19.16:661,0,19	0/1:14,0:14:30.13:55,0,30	0/1:10,0:11:64.44:64,0,129	0/1:17,0:23:67.32:67,0,185	0/0:6,0:6:8.86:0,9,56	0/0:9,0:9:23.44:0,23,144	0/1:12,8:20:64.17:474,0,64	0/1:12,0:14:99:178,0,104	0/0:29,0:26:58.11:0,58,366	0/1:11,0:12:5.59:6,0,115	0/1:10,0:9:24.66:28,0,25	0/0:16,0:16:48.15:0,48,818	0/0:23,0:23:69.24:0,69,1231	0/0:27,0:27:75.24:0,75,1293	0/0:17,0:17:51.11:0,51,876	0/1:19,1:20:23.80:24,0,263	0/0:21,0:20:10.52:0,11,181	0/0:2,0:2:5.88:0,6,36
chr10	85394035	.	T	TTTTG	1134.48	PASS	AB=0.991;AC=14;AF=0.250;AN=56;BaseQRankSum=6.477;DP=540;FS=5.166;HRun=0;HaplotypeScore=154.7090;InbreedingCoeff=0.0605;MQ=54.78;MQ0=16;MQRankSum=-6.302;QD=4.40;ReadPosRankSum=2.295;VQSLOD=2.2899;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:14.04:86,0,14	0/1:16,0:15:25.09:25,0,191	0/1:44,0:16:24.40:24,0,275	0/1:36,0:12:1.64:2,0,46	0/0:25,0:25:66.21:0,66,1142	0/0:24,0:23:66.21:0,66,1175	0/1:7,0:7:24.16:28,0,24	0/0:30,0:24:43.30:0,43,294	0/0:10,0:10:27.08:0,27,462	0/1:30,0:29:99:162,0,124	0/1:21,0:20:25.19:25,0,163	1/1:6,7:14:4.41:394,4,0	0/1:13,1:13:4.74:205,0,5	1/1:19,2:21:19.34:301,19,0	0/0:5,0:5:8.90:0,9,59	0/0:8,0:8:19.13:0,19,121	0/1:23,0:22:16.88:17,0,144	0/1:14,0:14:24.53:25,0,99	0/0:29,0:26:46.66:0,47,299	0/0:12,0:12:25.13:0,25,164	0/0:10,0:9:14.27:0,14,92	0/0:16,0:16:48.16:0,48,869	0/0:24,0:24:69.23:0,69,1235	0/0:27,0:27:75.25:0,75,1340	0/0:17,0:17:45.15:0,45,837	0/0:20,0:20:26.84:0,27,290	0/0:21,0:20:28.34:0,28,197	0/0:4,0:4:11.97:0,12,115
chr10	85394040	.	G	GTTTT	2246.11	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=10.624;DP=511;FS=2.242;HRun=9;HaplotypeScore=140.3542;InbreedingCoeff=0.6420;MQ=55.17;MQ0=14;MQRankSum=-9.827;QD=7.59;ReadPosRankSum=-3.546;VQSLOD=-0.5645;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:9.51:35,10,0	0/1:15,0:14:35.44:116,0,35	0/0:35,0:15:19.34:0,19,246	0/0:32,0:9:2.76:0,3,60	0/0:23,0:23:50.94:0,51,673	0/0:23,0:22:58.98:0,59,819	1/1:7,0:7:5.71:32,6,0	1/1:22,0:18:5.41:24,5,0	0/0:9,0:9:19.47:0,19,285	1/1:30,0:31:27.79:439,28,0	0/1:22,0:21:7.33:179,0,7	1/1:14,0:14:20.90:358,21,0	1/1:12,0:12:16.59:226,17,0	1/1:15,8:23:15.05:297,15,0	1/1:6,0:6:3:27,3,0	1/1:8,0:8:6.71:42,7,0	0/1:23,0:22:4.04:120,0,4	1/1:11,0:11:9.52:108,10,0	1/1:25,0:23:31.24:189,31,0	1/1:13,0:13:14.54:80,15,0	1/1:10,0:9:6.11:31,6,0	0/0:17,0:18:38.97:0,39,509	0/0:24,0:24:56.93:0,57,796	0/0:28,0:29:50.73:0,51,778	0/0:15,0:16:41.45:0,41,550	1/1:20,0:20:16.36:91,16,0	1/1:20,0:19:8.58:54,9,0	0/0:4,0:4:2.36:0,2,24
chr10	85394097	.	C	CCA	1618.73	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-5.585;DP=514;FS=17.552;HRun=0;HaplotypeScore=72.8001;InbreedingCoeff=0.8339;MQ=69.95;MQ0=2;MQRankSum=0.576;QD=30.54;ReadPosRankSum=2.743;VQSLOD=4.0210;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:45.14:0,45,554	0/0:15,0:15:36.11:0,36,443	0/0:22,0:16:20.65:0,21,231	0/1:12,0:12:12.49:12,0,117	0/0:33,0:33:81.25:0,81,997	0/0:26,0:26:66.20:0,66,802	0/0:12,0:12:33.10:0,33,406	0/0:27,0:27:57.17:0,57,692	0/0:8,0:8:21.05:0,21,243	0/0:29,0:29:78.24:0,78,949	0/0:26,0:26:72.21:0,72,874	0/0:14,0:14:27.08:0,27,332	0/0:12,0:13:32.93:0,33,377	0/0:15,0:15:27.08:0,27,331	1/1:0,16:16:48.16:783,48,0	1/1:3,4:7:15.05:229,15,0	0/0:20,0:20:24.02:0,24,559	1/1:1,17:17:48.12:741,48,0	0/0:13,0:13:30.07:0,30,353	0/0:18,0:18:54.16:0,54,652	0/0:14,0:14:39.12:0,39,472	0/0:21,0:21:54.17:0,54,663	0/0:23,0:23:57.17:0,57,689	0/0:24,0:24:54.15:0,54,651	0/0:20,0:20:54.17:0,54,665	0/0:22,0:23:65.99:0,66,762	0/0:17,0:17:42.13:0,42,517	0/0:7,0:7:21.07:0,21,258
chr10	85394639	.	TA	T	951.40	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.849;DP=557;FS=3.479;HRun=3;HaplotypeScore=55.3013;InbreedingCoeff=0.9951;MQ=83.76;MQ0=0;MQRankSum=-0.067;QD=29.73;ReadPosRankSum=2.667;VQSLOD=3.2830;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.21:0,90,1149	0/0:8,0:8:21.07:0,21,290	0/0:21,0:21:45.57:0,46,603	0/0:13,0:12:29.72:0,30,394	0/0:29,0:29:81.23:0,81,1070	0/0:23,0:23:69.18:0,69,887	0/0:13,0:13:36.08:0,36,450	0/0:34,0:34:99:0,99,1277	0/0:22,0:22:63.11:0,63,812	0/0:22,0:22:63.19:0,63,830	0/0:14,0:14:39.13:0,39,539	0/0:23,0:23:69.19:0,69,892	0/0:17,0:17:51.14:0,51,672	0/0:20,0:20:60.18:0,60,798	1/1:0,18:18:48.15:592,48,0	1/1:0,14:14:39.12:481,39,0	0/0:19,0:19:57.18:0,57,771	0/0:13,0:13:39.09:0,39,502	0/0:22,0:22:66.16:0,66,874	0/0:21,0:21:63.18:0,63,834	0/0:30,0:30:87.17:0,87,1083	0/0:18,0:18:54.13:0,54,693	0/0:20,0:20:57.19:0,57,787	0/0:31,0:31:87.21:0,87,1114	0/0:12,0:12:30.02:0,30,375	0/0:23,0:23:66.22:0,66,913	0/0:20,0:20:60.19:0,60,813	0/0:7,0:7:21.07:0,21,290
chr10	85395003	.	C	CT	388.21	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.270;DP=545;FS=1.004;HRun=8;HaplotypeScore=76.4816;InbreedingCoeff=0.8163;MQ=71.21;MQ0=0;MQRankSum=-1.880;QD=19.41;ReadPosRankSum=1.286;VQSLOD=3.6207;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.04:0,87,796	0/0:11,0:11:27.01:0,27,247	0/0:10,0:9:20.75:0,21,174	0/0:5,0:5:2.73:0,3,27	0/0:28,1:29:46.41:0,46,675	0/0:21,0:21:45.01:0,45,412	0/0:10,0:10:27.01:0,27,247	0/0:25,0:25:69.02:0,69,625	0/0:17,0:17:51.03:0,51,467	0/0:22,0:21:57.02:0,57,521	0/0:26,0:26:65.95:0,66,594	0/0:13,0:13:39.02:0,39,357	0/0:23,0:23:50.99:0,51,460	0/0:13,0:13:27:0,27,247	0/0:15,0:15:42.01:0,42,380	0/0:20,0:20:41.99:0,42,374	0/0:31,0:31:84.04:0,84,769	1/1:7,13:20:42.12:483,42,0	0/0:17,0:17:33.01:0,33,302	0/0:31,0:31:75:0,75,677	0/0:7,0:7:12.01:0,12,110	0/0:15,0:15:42.02:0,42,384	0/0:25,0:25:75.02:0,75,681	0/0:11,0:11:30.02:0,30,275	0/0:26,0:26:72.02:0,72,656	0/0:29,0:29:81.01:0,81,733	0/0:32,0:32:81.04:0,81,737	0/0:10,0:10:24.01:0,24,220
chr10	85395061	.	AT	A	4147.90	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=8.279;DP=561;FS=1.144;HRun=9;HaplotypeScore=69.7106;InbreedingCoeff=0.9836;MQ=73.53;MQ0=0;MQRankSum=0.373;QD=21.16;ReadPosRankSum=-0.584;VQSLOD=4.0519;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.18:0,63,721	0/0:10,0:10:30.06:0,30,326	0/0:18,0:17:22.83:0,23,303	0/0:7,0:7:11.16:0,11,150	0/0:33,0:33:81.23:0,81,925	0/0:20,0:20:51.14:0,51,578	0/0:15,0:15:45.12:0,45,509	1/1:4,24:28:72.04:659,72,0	0/0:13,0:13:36.11:0,36,415	0/0:19,0:19:45.03:0,45,500	0/0:26,0:26:72.21:0,72,831	0/0:18,0:18:51.13:0,51,577	0/0:19,0:19:54.15:0,54,613	0/0:17,0:17:45.11:0,45,499	1/1:0,15:15:36.02:330,36,0	1/1:2,15:17:33.02:302,33,0	0/0:38,0:38:99:0,108,1222	1/1:1,12:13:33.02:302,33,0	1/1:3,14:17:43.26:387,43,0	1/1:5,32:37:90.02:824,90,0	1/1:0,17:17:39.02:357,39,0	0/0:17,0:17:48.12:0,48,535	0/0:21,2:23:8.26:0,8,603	0/0:17,0:17:48.14:0,48,554	0/0:31,0:31:81.24:0,81,935	1/1:2,17:19:51.03:467,51,0	1/1:6,14:20:27.01:247,27,0	1/1:0,13:13:30:275,30,0
chr10	85395781	.	CAT	C	1521.42	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=8.250;DP=633;FS=0.630;HRun=0;HaplotypeScore=73.0385;InbreedingCoeff=0.7727;MQ=68.75;MQ0=0;MQRankSum=-2.172;QD=29.26;ReadPosRankSum=1.020;VQSLOD=5.0036;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:75.25:1104,75,0	0/0:14,0:14:42.14:0,42,787	0/0:8,0:7:17.81:0,18,189	0/1:10,0:10:16.06:16,0,349	0/0:43,0:43:99:0,126,2325	0/0:27,0:27:81.26:0,81,1468	1/1:0,15:15:36.12:530,36,0	0/0:47,0:47:99:0,129,2384	0/0:20,0:20:57.20:0,57,1052	0/0:37,0:37:99:0,111,2018	0/0:37,0:37:99:0,105,1943	0/0:15,0:15:45.14:0,45,812	0/0:22,0:22:66.23:0,66,1218	0/0:18,0:18:51.16:0,51,924	0/0:16,0:16:42.14:0,42,776	0/0:22,0:22:66.20:0,66,1172	0/0:32,0:32:96.28:0,96,1699	0/0:27,0:27:78.27:0,78,1455	0/0:12,0:12:33.05:0,33,534	0/0:31,0:31:87.30:0,87,1621	0/0:8,0:8:24.08:0,24,450	0/0:6,0:6:15.05:0,15,281	0/0:12,0:12:36.12:0,36,674	0/0:15,0:15:45.15:0,45,826	0/0:39,0:39:99:0,117,2192	0/0:30,0:30:87.30:0,87,1588	0/0:37,0:37:99:0,105,1931	0/0:6,0:6:18.06:0,18,337
chr10	85396237	.	AT	A	4131.79	PASS	AB=0.875;AC=17;AF=0.304;AN=56;BaseQRankSum=5.444;DP=655;FS=5.803;HRun=10;HaplotypeScore=73.6661;InbreedingCoeff=0.9105;MQ=71.65;MQ0=0;MQRankSum=-0.607;QD=19.77;ReadPosRankSum=0.371;VQSLOD=4.5873;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:33:65.62:0,66,351	0/0:10,0:10:21.06:0,21,232	0/1:12,2:13:28.60:29,0,197	0/0:10,0:10:14.91:0,15,132	0/0:33,0:33:90.21:0,90,977	0/0:21,0:21:57.14:0,57,623	0/0:22,0:22:63.60:0,64,671	1/1:3,25:28:74.94:641,75,0	0/0:24,1:25:28.07:0,28,527	0/0:21,0:21:51.12:0,51,551	0/0:23,0:23:63.15:0,63,680	0/0:23,0:23:60.16:0,60,664	0/0:27,0:27:72.15:0,72,779	0/0:23,0:23:60.15:0,60,657	0/0:26,0:26:75.20:0,75,830	0/0:23,0:23:54.13:0,54,583	0/0:35,0:38:98.93:0,99,1057	1/1:0,17:17:47.94:410,48,0	1/1:5,16:21:17.78:383,18,0	1/1:4,34:38:95.97:833,96,0	1/1:0,11:11:29.99:260,30,0	0/0:15,0:15:45.11:0,45,491	0/0:23,0:23:69.18:0,69,756	0/0:17,0:17:48.12:0,48,523	0/0:31,1:33:70.03:0,70,976	1/1:5,25:30:38.72:553,39,0	1/1:7,34:42:95.01:813,95,0	1/1:0,8:8:24:208,24,0
chr10	85397130	.	GTGTA	G	5721.68	PASS	AB=0.976;AC=34;AF=0.630;AN=54;BaseQRankSum=12.719;DP=573;FS=0.000;HRun=0;HaplotypeScore=102.6097;InbreedingCoeff=0.8034;MQ=59.25;MQ0=3;MQRankSum=-1.222;QD=15.38;ReadPosRankSum=1.198;VQSLOD=4.1376;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,21:35:39.13:610,39,0	1/1:5,5:11:14.55:215,15,0	0/1:12,0:5:0:0,0,0	./.	0/0:36,1:37:13.29:0,13,1268	0/1:19,1:20:22.87:23,0,413	1/1:12,0:19:2.83:27,3,0	1/1:37,0:37:12.04:174,12,0	0/0:25,0:25:48.16:0,48,1107	1/1:5,17:23:34.17:761,34,0	1/1:10,11:21:27.09:422,27,0	0/0:20,0:21:42.14:0,42,972	0/0:21,0:21:39.13:0,39,893	0/0:17,0:17:42.14:0,42,986	1/1:6,0:12:9.01:84,9,0	1/1:4,0:13:24.02:221,24,0	1/1:9,10:19:18.06:282,18,0	1/1:10,0:17:12.01:112,12,0	1/1:16,3:19:9.03:141,9,0	1/1:14,17:31:48.16:751,48,0	1/1:5,7:12:15.05:235,15,0	0/0:13,0:13:18.06:0,18,425	0/0:17,0:17:42.13:0,42,895	0/0:18,0:18:30.10:0,30,692	0/0:25,1:26:4.26:0,4,1067	1/1:13,13:26:42.11:610,42,0	1/1:11,20:31:60.20:939,60,0	1/1:10,4:14:11.38:117,11,0
chr10	85398781	.	AT	A	1919.86	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.483;DP=497;FS=5.863;HRun=9;HaplotypeScore=53.3040;InbreedingCoeff=0.9639;MQ=71.98;MQ0=1;MQRankSum=1.492;QD=17.94;ReadPosRankSum=3.076;VQSLOD=3.9175;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,43:51:99:1099,118,0	0/0:7,0:7:21.06:0,21,241	0/0:11,0:9:18.01:0,18,178	0/0:17,0:14:8.41:0,8,136	0/0:25,0:25:60.16:0,60,682	0/0:16,0:16:42.12:0,42,484	1/1:4,14:18:33.01:302,33,0	0/0:31,0:31:81.19:0,81,909	0/0:8,0:8:21.02:0,21,214	0/0:21,0:20:47.97:0,48,525	0/0:20,0:20:57.17:0,57,657	0/0:11,0:11:30.07:0,30,335	0/0:13,0:13:33.10:0,33,381	0/0:13,0:13:36.11:0,36,413	1/1:3,22:25:22.41:459,22,0	1/1:3,10:13:24.01:220,24,0	0/0:35,0:34:91.84:0,92,999	0/0:24,0:24:63.16:0,63,704	0/0:18,0:17:48.14:0,48,554	0/0:17,0:17:39.07:0,39,428	0/0:17,0:17:48.14:0,48,552	0/0:7,0:7:18.05:0,18,208	0/0:5,0:5:15.04:0,15,173	0/0:9,0:9:21.06:0,21,242	0/0:22,0:22:54.16:0,54,623	0/0:19,0:19:51.13:0,51,572	0/0:14,0:14:39.11:0,39,443	0/0:10,0:10:15:0,15,150
chr10	85400352	.	GGAC	G	3146.39	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.955;DP=794;FS=4.269;HRun=0;HaplotypeScore=112.0842;InbreedingCoeff=0.9911;MQ=85.52;MQ0=0;MQRankSum=-4.837;QD=41.40;ReadPosRankSum=1.753;VQSLOD=5.2821;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,48:51:99:2199,132,0	0/0:9,0:9:27.09:0,27,599	0/0:25,0:25:60.17:0,60,1365	0/0:33,0:33:83.20:0,83,1567	0/0:23,0:23:63.22:0,63,1407	0/0:27,0:27:78.21:0,78,1674	1/1:0,25:25:66.18:1069,66,0	0/0:32,0:32:96.32:0,96,2123	0/0:13,0:13:30.10:0,30,680	0/0:28,0:28:81.28:0,81,1828	0/0:27,0:27:75.18:0,75,1597	0/0:20,0:20:57.20:0,57,1272	0/0:35,0:35:99:0,102,2292	0/0:34,0:34:84.27:0,84,1826	0/0:32,0:32:87.26:0,87,1893	0/0:31,0:31:80.61:0,81,1834	0/0:37,0:37:99:0,111,2494	0/0:34,0:34:99:0,99,2196	0/0:27,0:27:69.24:0,69,1526	0/0:26,0:26:69.24:0,69,1539	0/0:60,0:60:99:0,166,3694	0/0:33,0:33:99:0,99,2156	0/0:29,0:29:78.21:0,78,1657	0/0:29,0:29:81.26:0,81,1751	0/0:26,0:26:72.25:0,72,1605	0/0:15,0:15:42.14:0,42,902	0/0:28,0:28:84.23:0,84,1844	0/0:5,0:5:15.05:0,15,340
chr10	85401073	.	T	TA	1582.79	PASS	AB=0.964;AC=9;AF=0.161;AN=56;BaseQRankSum=4.360;DP=618;FS=3.108;HRun=9;HaplotypeScore=96.0229;InbreedingCoeff=0.8375;MQ=67.77;MQ0=5;MQRankSum=-4.959;QD=15.22;ReadPosRankSum=-0.394;VQSLOD=3.7639;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:34:27.12:0,27,84	1/1:3,6:9:18.50:178,18,0	0/0:38,0:14:23.71:0,24,182	0/0:48,0:13:23.85:0,24,181	0/0:25,0:25:68.98:0,69,599	0/0:14,0:14:41.98:0,42,360	0/0:0,0:11:14.06:0,14,56	0/0:28,0:27:59.96:0,60,515	0/0:28,0:28:71.84:0,72,604	1/1:8,15:22:45.06:463,45,0	1/1:6,10:16:33.05:334,33,0	0/0:13,0:13:26.19:0,26,203	0/0:22,0:22:31.75:0,32,320	0/0:22,0:22:53.91:0,54,370	0/0:26,0:26:10.63:0,11,21	0/1:26,0:27:16.82:17,0,30	1/1:5,24:29:77.97:754,78,0	0/0:20,0:20:43.94:0,44,254	0/0:20,0:20:47.98:0,48,416	0/0:31,0:31:80.87:0,81,685	0/0:8,0:8:17.99:0,18,156	0/0:11,0:11:26.99:0,27,234	0/0:20,0:20:47.02:0,47,397	0/0:15,0:15:38.94:0,39,327	0/0:19,0:19:50.98:0,51,443	0/0:30,0:30:31.08:0,31,436	0/0:27,0:27:68.92:0,69,591	0/0:4,0:4:9:0,9,78
chr10	85401078	.	AAAAAG	A	3015.07	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=8.898;DP=617;FS=1.016;HRun=0;HaplotypeScore=129.5019;InbreedingCoeff=0.8136;MQ=61.90;MQ0=5;MQRankSum=-5.460;QD=16.94;ReadPosRankSum=3.500;VQSLOD=3.3514;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:39.11:449,39,0	0/0:6,0:12:17.98:0,18,342	0/0:35,0:11:3.48:0,3,47	0/0:53,0:11:2.98:0,3,22	0/0:24,0:24:42.14:0,42,1125	0/0:15,0:15:30.10:0,30,810	1/1:11,0:11:21.03:256,21,0	0/0:25,0:24:27.07:0,27,471	0/0:27,0:27:57.16:0,57,1430	0/0:24,0:23:47.63:0,48,845	0/0:17,0:17:24.07:0,24,459	1/1:7,5:12:6.02:107,6,0	1/1:11,11:22:33.11:589,33,0	1/1:13,9:22:24.08:427,24,0	1/1:26,0:26:36.06:419,36,0	0/1:30,0:30:37.88:428,0,38	0/0:30,0:30:53.50:0,54,1150	1/1:7,16:23:30.08:535,30,0	0/0:21,0:21:30.01:0,30,668	0/0:29,0:29:48.16:0,48,1309	0/0:9,0:9:21.06:0,21,461	0/0:12,0:12:18.05:0,18,440	0/0:18,0:18:33.09:0,33,843	0/0:14,0:14:30.09:0,30,730	0/0:19,0:19:42.13:0,42,1075	0/0:28,0:28:51.16:0,51,1288	0/0:24,0:24:39.13:0,39,1060	0/0:3,0:3:6.02:0,6,166
chr10	85401079	.	AAAAGAAAAGAAAAG	A	3474.74	PASS	AB=0.921;AC=8;AF=0.143;AN=56;BaseQRankSum=3.397;DP=613;FS=0.519;HRun=0;HaplotypeScore=216.5364;InbreedingCoeff=0.1270;MQ=60.20;MQ0=5;MQRankSum=-7.462;QD=20.44;ReadPosRankSum=1.455;VQSLOD=2.6121;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:20.67:21,0,31	0/1:12,0:12:9.39:9,0,916	0/0:34,0:10:23.63:0,24,337	0/0:53,0:10:29.82:0,30,345	0/0:24,0:24:72.15:0,72,3139	0/0:15,0:15:45.12:0,45,2270	0/0:11,0:11:21.07:0,21,686	0/0:26,0:25:75.17:0,75,2693	0/0:26,0:26:72.23:0,72,4240	0/1:23,0:22:99:100,0,2304	0/1:17,0:17:95.62:96,0,1134	0/0:12,0:12:27.03:0,27,402	0/0:22,0:22:36.33:0,36,1281	0/0:22,0:22:57.10:0,57,1216	1/1:0,25:26:36.12:1448,36,0	0/1:3,27:30:99:1686,0,157	0/1:30,0:30:99:115,0,2996	0/0:23,0:23:51.12:0,51,1244	0/0:21,0:21:57.14:0,57,2250	0/0:28,0:28:81.11:0,81,3568	0/0:9,0:9:27.07:0,27,1366	0/0:11,0:11:30.08:0,30,1370	0/0:18,0:18:48.13:0,48,2373	0/0:13,0:13:39.11:0,39,2125	0/0:19,0:19:51.14:0,51,2878	0/0:27,0:27:41.89:0,42,3621	0/0:25,0:25:75.17:0,75,3302	0/0:4,0:4:12.03:0,12,568
chr10	85401102	.	A	AGAAAG	3652.32	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.626;DP=628;FS=6.920;HRun=0;HaplotypeScore=138.0149;InbreedingCoeff=0.9868;MQ=61.71;MQ0=6;MQRankSum=-3.255;QD=45.09;ReadPosRankSum=-0.178;VQSLOD=3.4411;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:68.40:0,68,824	1/1:14,3:17:41.95:596,42,0	0/0:37,0:16:31.58:0,32,363	0/0:60,0:17:12.57:0,13,173	0/0:23,0:23:69.10:0,69,1094	0/0:13,0:13:36.10:0,36,664	0/0:11,0:11:32.97:0,33,398	0/0:33,0:32:81.13:0,81,917	0/0:27,0:27:78.16:0,78,1249	1/1:5,15:20:60.09:1116,60,0	1/1:2,11:16:29.95:596,30,0	0/0:12,0:12:27.04:0,27,275	0/0:18,0:18:48.10:0,48,580	0/0:17,0:17:47.12:0,47,522	0/0:23,0:23:36.12:0,36,617	0/0:32,0:32:52.53:0,53,795	1/1:16,11:27:61.29:1344,61,0	0/0:25,0:25:57:0,57,630	0/0:26,0:26:69:0,69,887	0/0:26,0:26:72.16:0,72,1198	0/0:10,0:10:30.06:0,30,445	0/0:12,0:12:27.05:0,27,419	0/0:17,0:17:45.10:0,45,735	0/0:13,0:13:39.07:0,39,630	0/0:19,0:19:54.06:0,54,907	0/0:28,0:28:41.28:0,41,1180	0/0:22,0:22:63.13:0,63,1013	0/0:5,0:5:15:0,15,200
chr10	85402883	.	A	ACTCTCTCT	1916.30	PASS	AB=0.950;AC=18;AF=0.333;AN=54;BaseQRankSum=4.607;DP=520;FS=9.794;HRun=0;HaplotypeScore=143.5076;InbreedingCoeff=0.5602;MQ=63.16;MQ0=10;MQRankSum=-4.510;QD=10.41;ReadPosRankSum=-4.317;VQSLOD=0.5547;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:5.57:0,6,383	1/1:13,0:12:14.59:346,15,0	0/0:20,0:16:3.01:0,3,72	0/0:23,0:14:3.01:0,3,74	0/0:19,0:20:24.06:0,24,495	0/0:20,0:20:30.08:0,30,672	0/0:22,0:20:18.06:0,18,367	0/0:32,0:31:5.55:0,6,147	0/0:19,0:18:21.07:0,21,456	1/1:22,0:19:30.06:657,30,0	./.	1/1:22,0:20:8.71:166,9,0	1/1:15,0:15:11.76:255,12,0	1/1:22,0:22:12.04:370,12,0	0/1:15,0:18:0:0,0,0	1/1:7,8:16:6.02:104,6,0	1/1:7,0:8:7.84:146,8,0	0/0:8,0:8:9.03:0,9,284	0/1:14,0:14:16.92:17,0,285	0/0:20,0:20:15.03:0,15,295	0/0:18,0:18:33.11:0,33,736	0/0:15,0:15:21.03:0,21,473	0/0:8,0:8:6.02:0,6,149	0/0:28,0:29:48.16:0,48,1148	0/0:18,0:18:18.06:0,18,423	0/0:17,0:17:21.07:0,21,466	0/1:18,0:17:18.75:19,0,285	0/1:12,0:11:14.58:15,0,205
chr10	85402918	.	CTGTGTGTGTGTGTGTGTG	C	467.16	PASS	AB=0.698;AC=2;AF=0.038;AN=52;BaseQRankSum=3.743;DP=543;FS=5.030;HRun=0;HaplotypeScore=214.8992;InbreedingCoeff=-0.0476;MQ=46.22;MQ0=14;MQRankSum=-5.140;QD=12.63;ReadPosRankSum=-3.650;VQSLOD=1.7747;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:33.76:0,34,2310	0/0:14,0:12:13.48:0,13,618	./.	./.	0/0:21,0:21:33.11:0,33,1939	0/0:28,0:27:39.61:0,40,2509	0/0:26,0:23:14.55:0,15,871	0/0:25,0:23:33.01:0,33,1390	0/0:20,0:20:30.44:0,30,2277	0/0:23,0:19:45.14:0,45,2729	0/0:12,0:10:12.04:0,12,869	0/1:12,6:19:38.75:418,0,39	0/1:9,7:16:24.21:137,0,24	0/0:11,2:20:11.85:0,12,105	0/0:23,0:20:9.03:0,9,623	0/0:17,0:16:9.50:0,10,524	0/0:11,0:10:15.05:0,15,844	0/0:8,0:8:24.08:0,24,1310	0/0:15,0:14:30.10:0,30,2121	0/0:16,0:15:14.71:0,15,1055	0/0:31,0:29:53.14:0,53,3085	0/0:29,0:29:42.62:0,43,2742	0/0:16,0:16:30.10:0,30,2220	0/0:36,0:35:59.66:0,60,4063	0/0:26,0:26:48.16:0,48,3413	0/0:21,0:21:54.19:0,54,3386	0/0:18,0:17:33.11:0,33,2252	0/0:11,0:9:15.05:0,15,1108
chr10	85403456	.	G	GT	7710.08	PASS	AB=0.571;AC=29;AF=0.518;AN=56;BaseQRankSum=-12.173;DP=583;FS=5.097;HRun=9;HaplotypeScore=54.4292;InbreedingCoeff=0.9390;MQ=68.45;MQ0=1;MQRankSum=-0.373;QD=23.94;ReadPosRankSum=0.678;VQSLOD=5.7290;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,37:45:98.95:1047,99,0	0/0:13,0:13:35.96:0,36,306	0/0:10,0:9:10.67:0,11,92	0/0:10,0:10:15.10:0,15,182	0/0:29,0:29:80.96:0,81,697	0/0:24,0:24:59.94:0,60,515	1/1:3,13:16:19.06:431,19,0	1/1:3,18:22:54.06:556,54,0	0/0:16,0:16:44.97:0,45,386	0/0:21,0:21:56.99:0,57,495	0/0:20,1:21:20.68:0,21,399	1/1:3,20:23:54.15:597,54,0	1/1:3,21:24:54.15:597,54,0	1/1:1,11:12:30.08:332,30,0	1/1:2,24:26:63.17:697,63,0	1/1:9,16:25:25.71:471,26,0	0/0:31,0:31:80.93:0,81,695	1/1:2,0:13:25.81:130,26,0	1/1:7,19:27:59.91:594,60,0	1/1:3,21:24:61.35:647,61,0	0/1:5,15:20:3.96:416,0,4	0/0:21,0:21:56.96:0,57,488	0/0:30,0:30:74.97:0,75,648	0/0:11,0:11:32.96:0,33,281	0/0:24,0:24:71.99:0,72,625	1/1:1,10:11:30.08:332,30,0	1/1:3,20:23:48.13:531,48,0	1/1:0,11:11:30.08:332,30,0
chr10	85404349	.	GGT	G	1026.87	PASS	AB=0.910;AC=22;AF=0.458;AN=48;BaseQRankSum=2.347;DP=661;FS=7.937;HRun=0;HaplotypeScore=88.7893;InbreedingCoeff=0.1681;MQ=56.22;MQ0=36;MQRankSum=1.192;QD=2.70;ReadPosRankSum=-0.605;VQSLOD=1.1973;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:35:12.03:0,12,147	./.	./.	./.	0/1:24,2:26:35.25:55,0,35	0/1:31,0:28:22.91:23,0,196	0/0:24,0:23:5.94:0,6,86	./.	0/0:9,0:9:12.04:0,12,177	0/0:21,0:18:0:0,0,0	1/1:16,5:20:6.01:64,6,0	0/0:20,0:20:11.14:0,11,118	0/0:11,0:16:8.99:0,9,75	0/0:16,0:16:14.68:0,15,126	1/1:15,6:21:21.05:226,21,0	0/1:21,4:25:29.22:114,0,29	0/1:23,6:29:26.17:143,0,26	1/1:15,1:18:2.84:14,3,0	1/1:24,2:24:6.01:64,6,0	1/1:21,6:28:17.88:174,18,0	1/1:24,0:19:5.85:46,6,0	0/1:25,2:28:34.36:34,0,57	0/0:23,0:23:12.04:0,12,177	0/0:24,0:24:17.92:0,18,258	0/1:24,3:27:14.19:14,0,200	0/1:33,0:30:13.19:13,0,153	0/1:28,5:32:26.36:125,0,26	1/1:4,1:6:8.85:78,9,0
chr10	85409197	.	TA	T	4536.67	PASS	AB=0.621;AC=27;AF=0.482;AN=56;BaseQRankSum=5.847;DP=404;FS=5.897;HRun=10;HaplotypeScore=101.1474;InbreedingCoeff=0.8911;MQ=70.46;MQ0=0;MQRankSum=-4.859;QD=20.53;ReadPosRankSum=1.133;VQSLOD=5.1317;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:20:38.97:338,39,0	0/0:5,0:5:12.03:0,12,133	0/0:16,0:14:23.20:0,23,217	0/0:17,0:13:12.65:0,13,110	0/0:8,0:8:24.05:0,24,257	0/0:17,0:17:36.09:0,36,389	1/1:4,18:22:44.97:390,45,0	0/1:7,10:18:16.53:250,0,17	0/0:8,0:8:24.06:0,24,265	0/0:27,0:27:63.17:0,63,697	0/0:24,0:24:66.12:0,66,699	1/1:0,17:17:47.99:416,48,0	1/1:1,12:13:29.98:260,30,0	1/1:2,9:11:26.99:234,27,0	1/1:4,21:25:62.97:546,63,0	1/1:1,21:22:59.98:520,60,0	0/0:18,0:18:39.09:0,39,423	0/0:18,0:18:45.11:0,45,489	1/1:2,8:10:26.99:234,27,0	1/1:2,14:16:38.97:338,39,0	1/1:1,4:5:12:104,12,0	0/0:3,0:3:9.01:0,9,91	0/0:2,0:2:6.02:0,6,66	0/0:5,0:5:15.04:0,15,166	0/0:13,0:14:38.93:0,39,405	1/1:3,17:20:50.98:439,51,0	1/1:5,11:16:35.97:308,36,0	1/1:0,6:6:18:156,18,0
chr10	85409899	.	G	GA	3022.10	PASS	AB=0.645;AC=13;AF=0.232;AN=56;BaseQRankSum=-11.437;DP=571;FS=0.391;HRun=9;HaplotypeScore=58.0682;InbreedingCoeff=0.8950;MQ=75.83;MQ0=1;MQRankSum=-3.056;QD=21.59;ReadPosRankSum=-0.545;VQSLOD=4.0899;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,108,936	0/0:12,0:12:29.96:0,30,255	0/0:21,0:21:47.23:0,47,380	0/0:19,0:18:35.40:0,35,355	0/0:32,0:32:89.96:0,90,775	0/0:15,0:15:35.98:0,36,312	0/0:18,0:18:50.99:0,51,443	0/1:9,11:20:7.20:365,0,7	0/0:19,0:19:53.97:0,54,465	0/0:24,1:25:28.82:0,29,465	0/0:21,0:21:56.65:0,57,480	0/0:15,1:16:11.81:0,12,331	0/0:17,0:17:44.94:0,45,383	0/0:23,0:23:65.98:0,66,573	0/0:18,1:19:20.81:0,21,410	0/0:18,0:18:47.98:0,48,417	0/0:27,1:28:38.73:0,39,550	0/0:12,0:12:32.99:0,33,286	1/1:4,11:16:12.97:353,13,0	1/1:3,20:23:54.11:584,54,0	1/1:0,8:8:18.05:199,18,0	0/0:19,0:19:53.99:0,54,469	0/0:19,0:19:44.99:0,45,390	0/0:19,0:19:47.99:0,48,416	0/0:17,0:17:44.99:0,45,391	1/1:7,20:28:10.90:537,11,0	1/1:2,28:31:80.88:858,81,0	1/1:0,12:13:29.91:313,30,0
chr10	85410221	.	CTG	C	12800.58	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=12.431;DP=603;FS=1.019;HRun=0;HaplotypeScore=120.2109;InbreedingCoeff=0.9996;MQ=96.37;MQ0=0;MQRankSum=-5.009;QD=35.76;ReadPosRankSum=2.946;VQSLOD=7.0915;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:36.12:516,36,0	1/1:0,12:12:27.09:387,27,0	0/0:26,0:26:69.24:0,69,1235	0/0:33,0:34:68:0,68,1387	0/0:27,0:27:75.26:0,75,1361	0/0:28,0:28:81.26:0,81,1447	1/1:1,11:12:33.11:473,33,0	1/1:2,22:24:66.22:945,66,0	0/0:28,0:28:78.27:0,78,1422	1/1:1,25:26:75.25:1072,75,0	1/1:1,32:33:81.27:1161,81,0	1/1:1,13:14:33.11:473,33,0	1/1:1,19:20:48.16:679,48,0	1/1:0,18:18:45.15:645,45,0	1/1:0,20:20:54.18:774,54,0	1/1:1,18:19:48.16:688,48,0	1/1:0,11:11:30.10:430,30,0	0/0:30,0:30:81.28:0,81,1453	1/1:0,15:15:42.12:581,42,0	1/1:2,23:24:57.19:817,57,0	1/1:0,29:29:63.21:903,63,0	0/0:21,0:21:60.21:0,60,1100	0/0:21,0:21:54.19:0,54,983	0/0:18,0:18:54.19:0,54,990	0/0:12,0:12:36.12:0,36,660	1/1:2,24:26:72.23:1012,72,0	1/1:0,21:21:57.19:817,57,0	1/1:0,15:15:30.10:430,30,0
chr10	85412301	.	CTGGTT	C	2533.79	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=6.467;DP=468;FS=28.390;HRun=0;HaplotypeScore=99.2746;InbreedingCoeff=0.7553;MQ=86.59;MQ0=6;MQRankSum=0.967;QD=11.57;ReadPosRankSum=1.586;VQSLOD=0.7528;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,15:23:24.08:408,24,0	1/1:1,4:5:5.14:107,5,0	0/0:109,0:60:8.38:0,8,104	0/1:74,0:48:8.43:8,0,108	0/0:8,0:8:15.05:0,15,385	0/0:13,0:13:27.09:0,27,653	1/1:7,12:19:12.04:184,12,0	1/1:6,1:7:3.01:43,3,0	0/0:7,0:7:21.07:0,21,537	1/1:3,8:11:21.05:314,21,0	1/1:3,3:6:3.01:48,3,0	0/0:9,0:9:21.07:0,21,540	0/0:9,0:9:12.04:0,12,274	0/0:17,0:17:36.08:0,36,821	0/0:5,0:5:9.03:0,9,152	0/0:10,0:10:8.76:0,9,101	1/1:8,6:13:33.10:553,33,0	0/0:5,0:5:12.04:0,12,337	1/1:7,5:12:15.04:231,15,0	1/1:2,3:5:5.97:73,6,0	1/1:6,14:20:0.43:202,0,0	0/0:11,0:11:21:0,21,441	0/0:13,0:13:24.08:0,24,499	0/0:24,0:24:60.15:0,60,1504	0/0:8,0:8:18.06:0,18,482	1/1:4,6:10:11.66:188,12,0	1/1:3,8:11:15.05:270,15,0	1/1:0,2:2:6.02:108,6,0
chr10	85412315	.	T	TTTGGT	198.60	PASS	AB=0.804;AC=6;AF=0.107;AN=56;BaseQRankSum=0.798;DP=474;FS=2.352;HRun=0;HaplotypeScore=106.9473;InbreedingCoeff=0.3875;MQ=76.10;MQ0=9;MQRankSum=-0.995;QD=1.22;ReadPosRankSum=-1.241;VQSLOD=1.9849;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:22.40:0,22,197	0/0:5,0:5:5.30:0,5,68	1/1:89,0:48:0.94:5,1,0	0/1:55,0:36:0.28:0,0,3	0/0:13,0:13:15.01:0,15,252	0/0:14,0:14:24.04:0,24,337	0/0:21,0:21:10.66:0,11,55	0/0:12,0:12:3:0,3,25	0/0:10,0:10:18.06:0,18,315	0/0:14,0:14:12.16:0,12,117	0/0:4,0:4:2.94:0,3,18	0/0:13,0:13:21.06:0,21,347	0/0:7,0:7:12.02:0,12,169	0/0:19,0:19:30.08:0,30,468	1/1:5,0:5:9.03:239,9,0	0/1:5,8:14:7.97:55,0,8	0/0:19,0:18:30.02:0,30,315	0/0:7,0:7:12.04:0,12,215	0/0:14,0:13:12:0,12,129	0/0:7,0:7:3.01:0,3,35	0/0:23,0:23:10.90:0,11,136	0/0:11,0:11:12.04:0,12,200	0/0:13,0:13:21.01:0,21,251	0/0:26,0:26:54.15:0,54,900	0/0:13,0:13:15.05:0,15,246	0/0:9,0:9:8.86:0,9,101	0/0:14,0:14:14.61:0,15,162	0/0:2,0:2:6.02:0,6,67
chr10	85413953	.	T	TTCTTTCTCTGATGTCTGC	6617.26	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.234;DP=603;FS=1.630;HRun=0;HaplotypeScore=270.3041;InbreedingCoeff=0.9995;MQ=81.24;MQ0=0;MQRankSum=-9.069;QD=129.75;ReadPosRankSum=1.227;VQSLOD=4.1554;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.24:0,84,3547	0/0:14,0:14:39.13:0,39,1742	0/0:20,0:20:33.10:0,33,815	0/0:16,0:16:42.12:0,42,1243	0/0:32,0:32:75.26:0,75,3229	0/0:20,0:20:54.19:0,54,2597	0/0:21,0:21:39.11:0,39,1679	0/0:32,0:32:57.18:0,57,2394	0/0:21,0:21:54.17:0,54,2480	0/0:33,0:32:75.25:0,75,3288	0/0:16,0:16:36.11:0,36,1413	0/0:21,0:21:48.16:0,48,2016	0/0:14,0:14:36.12:0,36,1715	0/0:20,0:20:45.15:0,45,2002	1/1:11,8:24:48.16:3572,48,0	1/1:11,9:27:42.14:3045,42,0	0/0:26,0:26:69.22:0,69,3216	0/0:26,0:26:60.21:0,60,2784	0/0:17,0:17:39.10:0,39,1496	0/0:24,0:24:54.15:0,54,1999	0/0:14,0:14:39.13:0,39,1803	0/0:18,0:18:48.15:0,48,1896	0/0:24,0:24:57.18:0,57,2033	0/0:14,0:14:39.13:0,39,1861	0/0:22,0:22:54.19:0,54,2538	0/0:25,0:25:45.15:0,45,2127	0/0:15,0:15:39.13:0,39,1906	0/0:16,0:16:41.93:0,42,2036
chr10	85415246	.	AT	A	1089.80	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.689;DP=551;FS=7.934;HRun=10;HaplotypeScore=56.6629;InbreedingCoeff=0.9890;MQ=67.60;MQ0=0;MQRankSum=-0.837;QD=13.13;ReadPosRankSum=0.116;VQSLOD=2.9119;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,19:25:56.97:495,57,0	0/0:5,0:5:15.04:0,15,166	0/0:14,0:12:19.27:0,19,220	0/0:9,0:9:26.90:0,27,273	0/0:25,0:25:69.17:0,69,748	0/0:14,0:14:33.09:0,33,365	1/1:3,19:22:50.98:443,51,0	0/0:42,0:42:73.77:0,74,979	0/0:15,0:15:39.10:0,39,424	0/0:24,0:24:51.14:0,51,564	0/0:12,0:12:24.06:0,24,266	0/0:17,0:17:48.13:0,48,531	0/0:24,0:24:57.15:0,57,630	0/0:14,1:15:16.05:0,16,398	1/1:17,0:17:41.36:159,41,0	1/1:19,0:19:38.97:153,39,0	0/0:20,0:20:54.15:0,54,597	0/0:28,0:28:66.18:0,66,729	0/0:23,0:23:51.12:0,51,544	0/0:22,0:22:54.13:0,54,588	0/0:13,0:13:36.10:0,36,398	0/0:13,0:13:36.10:0,36,398	0/0:17,0:17:42.08:0,42,452	0/0:12,0:12:28.67:0,29,329	0/0:19,1:20:31.08:0,31,555	0/0:28,0:29:51.99:0,52,769	0/0:35,0:35:85.18:0,85,988	0/0:20,0:20:42.05:0,42,434
chr10	85415256	.	TA	T	1026.11	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=8.889;DP=529;FS=35.793;HRun=3;HaplotypeScore=54.6669;InbreedingCoeff=0.7926;MQ=66.87;MQ0=0;MQRankSum=-1.012;QD=17.10;ReadPosRankSum=2.207;VQSLOD=1.6937;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:6.74:7,0,26	0/0:6,0:6:18.05:0,18,227	0/0:14,0:12:24.94:0,25,304	0/0:14,0:13:32.68:0,33,382	0/0:21,0:21:63.13:0,63,804	0/0:12,0:12:36.11:0,36,467	0/0:22,0:22:10.74:0,11,78	0/0:37,0:37:98.49:0,98,1214	0/0:16,0:16:48.11:0,48,593	0/0:20,0:20:60.13:0,60,747	0/0:9,0:9:27.05:0,27,341	0/0:17,0:17:51.15:0,51,655	0/0:21,0:21:63.17:0,63,797	0/0:17,0:17:46:0,46,561	1/1:0,18:18:48.15:591,48,0	1/1:0,20:20:45.14:554,45,0	0/0:21,0:21:63.16:0,63,797	0/0:28,0:28:81.13:0,81,978	0/0:20,0:20:54.16:0,54,683	0/0:19,0:19:54.16:0,54,707	0/0:13,0:13:39.12:0,39,506	0/0:16,0:16:48.12:0,48,588	0/0:15,0:15:42.11:0,42,519	0/0:12,0:12:19.52:0,20,411	0/0:20,0:20:58.07:0,58,750	0/0:29,0:29:73.68:0,74,1007	0/0:34,0:34:77.08:0,77,1254	0/0:16,0:16:45.14:0,45,584
chr10	85415762	.	CA	C	1172.40	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.163;DP=473;FS=6.628;HRun=1;HaplotypeScore=45.3759;InbreedingCoeff=0.9655;MQ=88.07;MQ0=0;MQRankSum=-1.887;QD=32.57;ReadPosRankSum=0.326;VQSLOD=2.7410;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.21:0,69,1077	0/0:3,0:3:9.03:0,9,144	0/0:20,0:20:26.31:0,26,782	0/0:15,0:16:40.38:0,40,607	0/0:16,0:16:48.15:0,48,743	0/0:12,0:12:33.11:0,33,521	0/0:7,0:7:21.07:0,21,336	0/0:31,0:31:93.32:0,93,1474	0/0:18,0:18:54.18:0,54,859	0/0:18,0:18:54.18:0,54,863	0/0:12,0:12:36.12:0,36,576	0/0:15,0:15:45.15:0,45,720	0/0:20,0:20:60.19:0,60,935	0/0:7,0:7:21.07:0,21,336	1/1:0,17:17:48.16:669,48,0	1/1:0,19:18:45.15:625,45,0	0/0:22,0:22:63.21:0,63,1007	0/0:20,0:20:57.19:0,57,909	0/0:20,0:20:60.17:0,60,891	0/0:23,0:23:69.24:0,69,1103	0/0:16,0:16:48.15:0,48,743	0/0:10,0:10:30.10:0,30,480	0/0:20,0:20:60.20:0,60,959	0/0:18,0:18:54.17:0,54,836	0/0:18,0:18:54.18:0,54,863	0/0:24,0:24:72.25:0,72,1150	0/0:18,0:18:54.18:0,54,858	0/0:10,0:10:30.07:0,30,425
chr10	85415917	.	G	GGGTT	7463.70	PASS	AC=32;AF=0.593;AN=54;BaseQRankSum=-1.824;DP=707;FS=3.937;HRun=0;HaplotypeScore=125.2607;InbreedingCoeff=0.9353;MQ=72.14;MQ0=5;MQRankSum=-2.381;QD=18.85;ReadPosRankSum=-4.569;VQSLOD=3.7717;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:65.84:0,66,998	1/1:9,0:9:14.98:178,15,0	0/0:36,0:28:2.93:0,3,40	./.	0/0:12,0:12:6.02:0,6,91	0/0:13,0:13:21.05:0,21,299	0/0:21,0:21:36.07:0,36,510	1/1:31,0:31:26.89:260,27,0	0/0:28,0:28:36.11:0,36,531	1/1:8,0:18:17.79:275,18,0	1/1:6,0:15:8.97:95,9,0	1/1:7,15:22:27.09:633,27,0	1/1:12,12:24:33.11:772,33,0	1/1:7,9:16:21.07:493,21,0	1/1:31,0:31:48.07:558,48,0	1/1:28,0:27:45.10:573,45,0	1/1:21,0:31:13.44:170,13,0	0/0:43,0:42:58.53:0,59,1224	1/1:17,8:23:24.05:439,24,0	1/1:10,11:22:32.96:602,33,0	1/1:23,21:47:30.57:705,31,0	0/0:16,0:16:27.07:0,27,377	0/0:12,0:12:24.07:0,24,351	0/0:44,0:46:78.17:0,78,1083	0/0:12,0:12:21.04:0,21,281	1/1:20,14:37:54.12:1010,54,0	1/1:13,10:22:15.05:349,15,0	1/1:6,9:15:15.05:352,15,0
chr10	85418295	.	GC	G	4123.36	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=4.805;DP=261;FS=16.299;HRun=1;HaplotypeScore=87.6496;InbreedingCoeff=0.5833;MQ=68.20;MQ0=0;MQRankSum=-6.393;QD=19.00;ReadPosRankSum=3.307;VQSLOD=2.7507;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:4.47:0,4,148	1/1:2,7:9:27.02:248,27,0	0/0:10,1:8:8.37:0,8,80	0/1:11,0:7:20.94:21,0,74	0/0:6,0:6:2.98:0,3,24	0/1:6,0:6:3.28:3,0,18	0/1:14,0:14:13.61:95,0,14	1/1:9,4:13:33.41:283,33,0	0/0:6,0:6:0.70:0,1,16	1/1:10,4:14:35.92:309,36,0	1/1:3,4:7:14.94:123,15,0	1/1:8,0:8:15:131,15,0	1/1:5,2:7:14.96:122,15,0	1/1:9,1:10:21:183,21,0	1/1:5,10:15:42:377,42,0	1/1:3,7:10:30.01:269,30,0	1/1:9,6:15:32.62:273,33,0	1/1:5,3:8:17.96:152,18,0	1/1:9,8:17:44.54:360,45,0	1/1:3,9:12:32.94:282,33,0	1/1:3,7:10:17.88:139,18,0	0/0:3,0:3:8.93:0,9,62	0/0:3,0:3:2.06:0,2,24	0/0:2,0:2:5.95:0,6,41	0/0:2,0:2:3.46:0,3,25	1/1:3,12:15:39.04:357,39,0	1/1:2,8:10:26.99:240,27,0	1/1:2,4:6:17.98:157,18,0
chr10	85418303	.	GGGGGGGGGCGGGA	G	8612.07	PASS	AB=1.000;AC=29;AF=0.558;AN=52;BaseQRankSum=7.384;DP=231;FS=60.638;HRun=0;HaplotypeScore=116.3401;InbreedingCoeff=0.6337;MQ=69.47;MQ0=0;MQRankSum=-5.321;QD=56.66;ReadPosRankSum=7.105;VQSLOD=1.7573;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:15.05:0,15,480	1/1:7,0:7:21.07:544,21,0	0/0:16,0:9:27.08:0,27,815	0/0:13,0:8:20.28:0,20,686	./.	0/0:6,0:6:8.62:0,9,179	0/0:16,0:16:43.92:0,44,1979	1/1:11,4:15:41.92:622,42,0	0/0:6,0:6:9.02:0,9,318	1/1:13,0:13:3.84:377,4,0	1/1:7,0:7:11.99:229,12,0	0/0:8,0:8:14.98:0,15,146	0/1:7,0:7:45.31:96,0,45	0/1:7,0:7:32.27:32,0,116	1/1:11,0:11:33.11:1181,33,0	1/1:7,1:8:24.07:793,24,0	0/1:12,0:12:18.24:352,0,18	1/1:4,0:4:9.03:149,9,0	1/1:7,8:15:19.73:779,20,0	1/1:4,9:13:30.03:887,30,0	1/1:0,7:7:12.01:335,12,0	./.	0/0:2,0:2:3.01:0,3,159	0/0:1,0:1:3.01:0,3,46	0/0:3,0:3:9.02:0,9,224	1/1:2,12:14:33.11:1068,33,0	1/1:0,8:8:24.08:777,24,0	1/1:0,4:4:12.04:391,12,0
chr10	85418304	.	GGGGGGGGCGGGA	G	9130.38	PASS	AB=1.000;AC=31;AF=0.596;AN=52;BaseQRankSum=6.203;DP=230;FS=45.071;HRun=0;HaplotypeScore=110.7981;InbreedingCoeff=0.7708;MQ=68.32;MQ0=0;MQRankSum=-6.226;QD=60.07;ReadPosRankSum=6.000;VQSLOD=2.7339;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:15.04:0,15,410	1/1:6,2:8:24.07:685,24,0	0/0:15,0:8:24.08:0,24,754	0/0:13,0:8:20.39:0,20,626	./.	0/0:6,0:6:8.24:0,8,161	0/0:17,0:17:46.93:0,47,1899	1/1:15,0:15:42:650,42,0	0/0:5,0:5:6.02:0,6,273	1/1:11,0:11:27.06:662,27,0	1/1:7,0:7:11.97:335,12,0	0/0:8,0:8:7.82:0,8,49	1/1:7,0:7:4.18:129,4,0	0/1:10,0:10:23.31:96,0,23	1/1:1,10:11:33.11:952,33,0	1/1:1,6:7:21.07:638,21,0	1/1:9,0:9:26.88:651,27,0	1/1:5,0:5:12.03:217,12,0	1/1:15,0:15:20.28:746,20,0	1/1:13,0:13:30.10:869,30,0	1/1:7,0:7:12.02:318,12,0	./.	0/0:2,0:2:3.01:0,3,175	0/0:1,0:1:2.99:0,3,24	0/0:3,0:3:9.01:0,9,210	1/1:15,0:15:36.12:1066,36,0	1/1:8,0:8:24.08:743,24,0	1/1:4,0:4:12.04:374,12,0
chr10	85418305	.	GGGGGGGCGGGA	G	9496.89	PASS	AC=34;AF=0.654;AN=52;BaseQRankSum=4.773;DP=238;FS=13.629;HRun=0;HaplotypeScore=109.5440;InbreedingCoeff=0.8679;MQ=67.76;MQ0=0;MQRankSum=-5.363;QD=56.87;ReadPosRankSum=3.569;VQSLOD=3.7643;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:15.03:0,15,401	1/1:6,4:10:30.09:704,30,0	0/0:15,0:8:24.08:0,24,703	0/0:13,0:8:20.55:0,21,544	./.	0/0:6,0:6:7.84:0,8,158	0/0:18,0:18:49.52:0,50,1777	1/1:15,0:15:42.14:738,42,0	0/0:5,0:5:6.02:0,6,259	1/1:8,4:12:30.10:651,30,0	1/1:3,4:7:11.99:265,12,0	1/1:7,0:7:8.90:73,9,0	1/1:6,0:6:14.99:269,15,0	1/1:9,0:9:23.07:249,23,0	1/1:11,0:11:33.11:906,33,0	1/1:7,0:7:21.07:607,21,0	1/1:6,6:12:35.69:581,36,0	1/1:8,0:8:20.96:384,21,0	1/1:15,0:15:20.79:844,21,0	1/1:13,0:13:30.10:821,30,0	1/1:7,0:7:12.02:297,12,0	./.	0/0:2,0:2:3.01:0,3,161	0/0:1,0:1:3.01:0,3,68	0/0:3,0:3:9:0,9,180	1/1:15,0:15:36.12:1007,36,0	1/1:9,0:9:27.09:747,27,0	1/1:4,0:4:12.04:353,12,0
chr10	85418306	.	GGGGGGCGGGA	G	9600.03	PASS	AC=34;AF=0.630;AN=54;BaseQRankSum=4.253;DP=252;FS=4.820;HRun=0;HaplotypeScore=110.8186;InbreedingCoeff=0.8677;MQ=67.15;MQ0=0;MQRankSum=-4.399;QD=53.63;ReadPosRankSum=2.819;VQSLOD=4.5196;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:15.05:0,15,376	1/1:12,0:12:36.11:751,36,0	0/0:15,0:8:24.08:0,24,664	0/0:13,0:8:20.30:0,20,507	0/0:3,0:3:3.01:0,3,50	0/0:6,0:6:7.58:0,8,124	0/0:19,0:19:52.12:0,52,1622	1/1:15,0:15:42.14:717,42,0	0/0:5,0:5:6.02:0,6,241	1/1:12,0:12:29.86:629,30,0	1/1:7,0:7:11.99:251,12,0	1/1:8,0:8:20.87:193,21,0	1/1:6,2:8:21.01:305,21,0	1/1:8,1:9:26.79:263,27,0	1/1:12,0:12:36.12:884,36,0	1/1:8,0:8:24.08:608,24,0	1/1:14,0:14:41.95:672,42,0	1/1:5,3:8:21.01:378,21,0	1/1:16,0:16:25.48:847,25,0	1/1:13,0:13:30.10:760,30,0	1/1:8,0:8:15.04:340,15,0	./.	0/0:2,0:2:3.01:0,3,147	0/0:1,0:1:3.01:0,3,60	0/0:4,0:4:11.40:0,11,179	1/1:15,0:15:36.12:933,36,0	1/1:9,0:9:27.09:693,27,0	1/1:5,0:5:15.05:376,15,0
chr10	85418311	.	GCGGGA	G	8031.61	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=3.084;DP=283;FS=0.000;HRun=0;HaplotypeScore=98.9216;InbreedingCoeff=0.8383;MQ=72.56;MQ0=0;MQRankSum=-4.885;QD=39.76;ReadPosRankSum=4.006;VQSLOD=4.8186;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:21.03:0,21,326	1/1:14,0:14:39.13:590,39,0	0/0:17,0:10:29.99:0,30,519	0/0:14,0:10:12.69:0,13,273	0/0:3,0:3:6.02:0,6,93	0/0:6,0:6:3.40:0,3,18	0/0:21,0:21:55.14:0,55,922	1/1:4,15:19:54.13:718,54,0	0/0:5,0:5:5.98:0,6,96	1/1:5,9:14:36.10:523,36,0	1/1:4,5:9:11.98:157,12,0	1/1:8,0:8:24.07:344,24,0	1/1:10,0:10:30.09:433,30,0	1/1:9,0:9:26.98:377,27,0	1/1:12,0:12:36.12:558,36,0	1/1:9,0:9:27.09:423,27,0	1/1:16,0:16:48.16:701,48,0	1/1:8,0:8:21.07:336,21,0	1/1:8,7:15:42.14:632,42,0	1/1:9,4:13:30.10:459,30,0	1/1:12,0:12:24.08:354,24,0	0/0:1,0:1:3.01:0,3,49	0/0:2,0:2:3.01:0,3,81	0/0:1,0:1:3.01:0,3,45	0/0:4,0:4:6.02:0,6,88	1/1:12,4:16:39.12:589,39,0	1/1:13,0:13:39.13:596,39,0	1/1:5,0:5:15.05:241,15,0
chr10	85418875	.	GGACA	G	1134.30	PASS	AB=0.875;AC=6;AF=0.107;AN=56;BaseQRankSum=5.512;DP=664;FS=7.497;HRun=0;HaplotypeScore=153.6011;InbreedingCoeff=-0.1371;MQ=55.11;MQ0=2;MQRankSum=-6.897;QD=7.13;ReadPosRankSum=-3.641;VQSLOD=1.2921;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:38.10:0,38,666	0/0:12,0:12:3.19:0,3,501	0/0:15,0:7:2.45:0,2,244	0/0:14,0:5:15:0,15,289	0/0:33,0:33:96.32:0,96,1992	0/0:23,0:23:69.15:0,69,1282	0/1:28,0:28:35.59:36,0,528	0/0:34,0:34:76.89:0,77,1356	0/0:17,0:17:51.11:0,51,991	0/0:27,0:27:9.98:0,10,1254	0/0:18,0:18:18.20:0,18,815	0/0:23,0:23:68.60:0,69,1367	0/0:23,0:23:65.22:0,65,1252	0/0:27,0:26:75.24:0,75,1637	0/0:25,0:25:69.21:0,69,1398	0/0:21,0:21:60.20:0,60,1427	0/0:34,0:34:96.06:0,96,1760	0/1:31,0:31:11.20:11,0,485	0/1:10,12:22:99:401,0,439	0/1:22,5:27:99:262,0,957	0/0:11,4:15:33.07:0,33,504	0/0:27,0:27:81.28:0,81,1743	0/0:29,0:29:84.28:0,84,1797	0/0:19,0:19:54.18:0,54,1210	0/0:20,0:20:57.06:0,57,1131	0/1:23,3:26:99:262,0,936	0/1:21,4:24:99:285,0,860	0/0:15,0:15:42.14:0,42,725
chr10	85418987	.	AT	A	5934.87	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=6.183;DP=587;FS=15.331;HRun=7;HaplotypeScore=62.7771;InbreedingCoeff=0.9971;MQ=77.11;MQ0=0;MQRankSum=-1.573;QD=25.69;ReadPosRankSum=-1.010;VQSLOD=3.4721;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.13:0,45,552	0/0:12,0:12:27.09:0,27,339	0/0:25,0:25:47.17:0,47,664	0/0:13,0:10:15.66:0,16,193	0/0:40,0:40:99:0,117,1439	0/0:21,0:21:63.20:0,63,793	0/0:17,0:17:45.14:0,45,566	1/1:6,37:43:99:1111,111,0	0/0:18,0:18:54.16:0,54,665	0/0:35,0:35:90.28:0,90,1122	0/0:17,0:17:42.13:0,42,528	0/0:22,0:22:57.14:0,57,685	0/0:11,0:11:33.11:0,33,415	0/0:11,0:11:27.09:0,27,340	1/1:1,22:23:57.13:582,57,0	1/1:2,18:20:48.11:490,48,0	0/0:13,0:13:30.10:0,30,375	1/1:1,9:10:27.06:275,27,0	1/1:1,20:21:57.07:554,57,0	1/1:1,24:25:66.11:663,66,0	1/1:1,11:12:24.05:245,24,0	0/0:15,0:15:42.13:0,42,528	0/0:25,0:25:69.13:0,69,824	0/0:18,0:18:48.13:0,48,579	0/0:25,0:25:60.18:0,60,743	1/1:2,26:28:74.91:730,75,0	1/1:1,27:28:78.18:796,78,0	1/1:3,18:21:48.10:490,48,0
chr10	85419927	.	T	TGC	2857.61	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=-0.504;DP=777;FS=2.261;HRun=0;HaplotypeScore=131.3237;InbreedingCoeff=0.6718;MQ=61.25;MQ0=15;MQRankSum=-0.746;QD=9.01;ReadPosRankSum=-1.458;VQSLOD=3.3884;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:14.20:0,14,72	0/1:9,0:9:6.91:7,0,98	0/0:46,0:27:53.19:0,53,577	0/0:51,0:22:43.85:0,44,507	0/0:27,0:27:68.92:0,69,657	0/0:18,0:18:23.79:0,24,395	0/0:37,0:37:17.20:0,17,91	1/1:17,0:17:41.41:309,41,0	0/0:39,0:39:92.98:0,93,932	0/1:29,0:27:55.23:55,0,350	0/1:15,0:17:45.19:45,0,214	0/0:28,0:27:45.58:0,46,231	0/0:24,0:25:37.16:0,37,190	0/0:26,0:27:33.61:0,34,167	1/1:37,0:37:27.08:330,27,0	1/1:22,1:21:36.03:438,36,0	0/1:23,0:23:75.09:177,0,75	1/1:15,0:15:37.40:219,37,0	1/1:21,1:21:59.55:574,60,0	1/1:15,1:16:6.02:70,6,0	1/1:47,1:47:12.04:168,12,0	0/0:27,0:27:66.04:0,66,701	0/0:23,0:23:37.81:0,38,578	0/0:40,0:40:99:0,102,1064	0/0:25,0:25:60.99:0,61,649	1/1:28,0:28:67:488,67,0	1/1:18,0:18:8.92:112,9,0	1/1:15,0:15:6.02:74,6,0
chr10	85419928	.	GCGCACACACACACACACACACACA	G	3079.55	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=4.326;DP=786;FS=0.740;HRun=0;HaplotypeScore=349.4842;InbreedingCoeff=0.5970;MQ=61.22;MQ0=15;MQRankSum=-4.545;QD=24.84;ReadPosRankSum=-0.185;VQSLOD=1.4700;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:0,47:47:33.11:1930,33,0	0/1:5,0:9:6.42:6,0,959	0/0:46,0:27:75.16:0,75,1222	0/0:51,0:22:62.99:0,63,1546	0/0:26,0:26:69.13:0,69,4781	0/0:19,0:19:51.02:0,51,3575	1/1:2,35:37:18.06:1150,18,0	0/0:17,0:17:51.06:0,51,2386	0/0:39,0:39:99:0,99,7012	0/1:17,0:29:99:125,0,4090	0/0:13,0:17:17.20:0,17,3012	0/0:0,0:26:48.16:0,48,3497	0/0:2,0:25:39.13:0,39,2596	0/0:2,0:27:36.12:0,36,2331	0/0:38,0:38:33.09:0,33,2328	0/0:24,0:22:36.12:0,36,3180	0/0:6,0:23:54.19:0,54,4380	0/0:15,0:15:42.08:0,42,2273	0/0:22,0:21:59.58:0,60,2998	0/0:16,0:16:11.94:0,12,656	0/0:52,0:51:22.12:0,22,1485	0/0:27,0:27:69.08:0,69,5273	0/0:23,0:23:63.04:0,63,4381	0/0:41,0:41:99:0,106,8523	0/0:25,0:25:69.13:0,69,4888	0/0:28,0:28:77.26:0,77,4453	0/0:18,0:18:9.50:0,10,933	0/0:15,0:15:6.02:0,6,593
chr10	85419930	.	G	GCGCACA	5115.23	PASS	AB=0.921;AC=22;AF=0.393;AN=56;BaseQRankSum=-4.895;DP=822;FS=0.000;HRun=0;HaplotypeScore=178.9606;InbreedingCoeff=0.5257;MQ=59.89;MQ0=15;MQRankSum=-2.000;QD=14.37;ReadPosRankSum=-2.035;VQSLOD=4.0251;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:14.47:0,14,207	0/1:12,0:12:21.55:22,0,103	0/0:47,0:25:53.19:0,53,577	0/0:51,0:22:43.01:0,43,506	0/0:24,0:28:46.99:0,47,861	0/0:13,0:19:47.87:0,48,665	0/0:35,0:35:17.79:0,18,174	1/1:22,0:22:57.61:557,58,0	0/0:33,0:38:98.70:0,99,1508	0/1:32,0:30:68.95:69,0,344	0/1:17,0:17:57.87:58,0,287	0/0:27,0:26:48.16:0,48,677	0/0:27,0:26:39.06:0,39,527	0/0:26,0:26:34.36:0,34,471	1/1:3,29:40:27.09:787,27,0	1/1:2,21:24:35.25:983,35,0	0/1:22,0:22:81.14:131,0,81	0/1:12,0:18:67.57:118,0,68	1/1:3,15:23:61.87:822,62,0	1/1:5,0:22:6.02:153,6,0	0/1:6,1:55:5.07:151,0,5	0/0:23,0:29:65.97:0,66,1021	0/0:21,0:23:62.91:0,63,940	0/0:35,0:43:99:0,108,1735	0/0:21,0:25:61.02:0,61,913	1/1:6,24:30:69.47:840,69,0	1/1:0,14:20:9.42:267,9,0	1/1:0,13:14:6.02:158,6,0
chr10	85420921	.	A	ATT	8195.77	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=2.824;DP=573;FS=3.701;HRun=8;HaplotypeScore=81.4109;InbreedingCoeff=0.9987;MQ=79.98;MQ0=0;MQRankSum=-1.801;QD=20.54;ReadPosRankSum=-2.337;VQSLOD=3.2451;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:36:77.78:275,78,0	1/1:4,0:14:30.45:122,30,0	0/0:19,0:19:41.73:0,42,413	0/0:9,0:9:19.74:0,20,207	0/0:21,0:21:54.11:0,54,591	0/0:26,0:26:66.14:0,66,724	1/1:2,0:18:34.93:120,35,0	1/1:3,25:31:84.16:1131,84,0	0/0:22,0:22:66.16:0,66,726	1/1:3,0:25:55.25:207,55,0	1/1:0,0:15:36.38:161,36,0	1/1:0,0:15:32.44:112,32,0	1/1:2,0:20:42.80:162,43,0	1/1:3,0:27:59.49:205,59,0	1/1:2,13:15:33.11:524,33,0	1/1:1,18:20:36.12:572,36,0	1/1:3,0:24:52.87:191,53,0	1/1:2,10:13:29.59:437,30,0	1/1:1,19:21:60.14:851,60,0	1/1:2,22:24:48.94:683,49,0	1/1:0,19:20:50.66:771,51,0	0/0:18,0:18:51.14:0,51,568	0/0:20,0:20:45.09:0,45,501	0/0:14,0:14:36.07:0,36,390	0/0:25,0:25:63.16:0,63,702	1/1:3,17:21:51.07:687,51,0	1/1:9,17:27:39.13:588,39,0	1/1:1,9:13:29.07:398,29,0
chr10	85421194	.	TAGAC	T	3511.61	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=7.242;DP=818;FS=4.943;HRun=0;HaplotypeScore=169.1971;InbreedingCoeff=0.8816;MQ=66.24;MQ0=4;MQRankSum=4.592;QD=16.33;ReadPosRankSum=1.672;VQSLOD=3.1075;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:35:24.03:223,24,0	1/1:2,13:15:33.11:523,33,0	0/0:19,0:16:12.04:0,12,255	0/0:34,0:26:9.01:0,9,163	1/1:12,22:34:66.22:1033,66,0	0/0:28,1:29:6.69:0,7,1116	1/1:17,0:30:12.01:111,12,0	0/0:30,0:30:22.31:0,22,393	0/0:37,0:37:72.25:0,72,1684	1/1:16,7:23:18.05:263,18,0	1/1:15,10:25:27.09:427,27,0	0/0:35,0:35:78.24:0,78,1735	0/0:34,0:34:66.20:0,66,1494	0/0:32,0:32:42.11:0,42,882	0/0:9,0:29:60.21:0,60,1065	0/0:10,0:31:39.13:0,39,680	1/1:12,25:37:57.67:904,58,0	1/1:12,0:16:3:28,3,0	0/0:18,0:19:21.04:0,21,328	0/0:25,0:35:16.59:0,17,320	0/0:25,0:33:6.02:0,6,101	0/0:38,0:38:72.23:0,72,1614	0/0:33,1:34:6.69:0,7,1129	0/0:30,0:30:54.19:0,54,1260	0/0:25,1:26:6.69:0,7,1162	0/0:19,0:31:57.14:0,57,975	0/0:16,0:34:60.14:0,60,989	0/0:4,0:9:15.05:0,15,252
chr10	85421833	.	TTCTCTCTCTCTCTCTC	T	2005.23	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=5.132;DP=550;FS=5.253;HRun=0;HaplotypeScore=207.5920;InbreedingCoeff=0.8667;MQ=63.80;MQ0=19;MQRankSum=-1.969;QD=16.17;ReadPosRankSum=-0.465;VQSLOD=2.3753;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:24.97:0,25,1013	0/0:5,0:6:9.03:0,9,259	./.	0/0:33,0:19:2.84:0,3,38	0/0:22,0:22:15.05:0,15,384	0/0:13,0:12:15.05:0,15,777	0/0:19,0:21:27.09:0,27,1058	1/1:33,0:32:5.90:80,6,0	0/0:18,0:20:27.09:0,27,1196	0/0:23,0:22:36.12:0,36,969	0/0:10,0:11:21.07:0,21,626	0/0:14,0:14:21.07:0,21,702	0/0:17,0:18:30.10:0,30,1031	0/0:7,0:9:15.05:0,15,667	0/0:17,0:18:24.08:0,24,1099	0/0:17,0:17:39.13:0,39,1798	0/0:17,0:27:36.12:0,36,1047	0/0:21,0:19:30.06:0,30,589	1/1:12,2:15:12.04:394,12,0	1/1:10,10:21:23.98:644,24,0	1/1:13,0:10:7.78:60,8,0	0/0:12,0:13:12.04:0,12,394	0/0:17,0:17:12.04:0,12,489	0/0:14,0:21:15.05:0,15,700	0/0:16,0:17:11.83:0,12,429	1/1:9,6:17:30.06:702,30,0	1/1:23,0:24:12.03:295,12,0	./.
chr10	85422362	.	A	AT	296.49	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.409;DP=456;FS=5.737;HRun=8;HaplotypeScore=57.3781;InbreedingCoeff=0.9040;MQ=65.61;MQ0=2;MQRankSum=0.287;QD=12.35;ReadPosRankSum=0.882;VQSLOD=2.5970;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:78:0,78,706	0/0:3,0:3:6:0,6,55	0/0:16,0:11:29.67:0,30,252	0/0:10,0:6:12:0,12,110	0/0:26,0:26:57:0,57,518	0/0:17,0:17:48.03:0,48,439	0/0:10,0:10:24.01:0,24,220	0/0:33,0:32:74.39:0,74,664	0/0:11,0:11:30.01:0,30,275	0/0:31,0:31:87.04:0,87,796	0/0:15,0:15:38.97:0,39,349	0/0:7,0:7:18.01:0,18,165	0/0:10,0:9:21:0,21,192	0/0:13,0:13:24:0,24,220	1/1:6,7:14:20.85:207,21,0	1/1:1,9:10:18.05:207,18,0	0/0:26,0:26:66.03:0,66,604	0/0:17,0:17:44.98:0,45,400	0/0:35,0:35:92.98:0,93,836	0/0:13,0:13:26.96:0,27,240	0/0:5,0:5:11.99:0,12,105	0/0:13,0:13:33:0,33,294	0/0:17,0:17:42.01:0,42,380	0/0:17,0:17:48.02:0,48,438	0/0:15,0:15:39.02:0,39,357	0/0:12,0:12:24.01:0,24,220	0/0:16,0:16:39.01:0,39,357	0/0:12,0:12:33.02:0,33,302
chr10	85423928	.	AATATATATATATATATAT	A	2277.81	PASS	AB=0.815;AC=22;AF=0.647;AN=34;BaseQRankSum=3.102;DP=173;FS=8.268;HRun=0;HaplotypeScore=83.6369;InbreedingCoeff=0.1343;MQ=72.24;MQ0=3;MQRankSum=-2.143;QD=18.52;ReadPosRankSum=2.526;VQSLOD=0.8900;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,4:14:6.02:255,6,0	1/1:2,1:3:3.01:147,3,0	./.	0/0:7,0:7:5.59:0,6,35	./.	./.	./.	0/1:27,0:38:26.51:27,0,346	./.	1/1:4,3:7:9.01:317,9,0	1/1:4,1:5:3.01:106,3,0	1/1:1,0:2:1.82:5,2,0	0/0:4,0:4:2.99:0,3,24	./.	1/1:4,2:6:6.02:293,6,0	1/1:3,3:7:12.04:565,12,0	1/1:7,2:9:3.01:147,3,0	0/1:10,0:10:44.03:79,0,44	1/1:3,1:5:6.02:232,6,0	0/1:5,0:7:30.13:79,0,30	0/0:3,0:3:2.97:0,3,20	./.	./.	./.	./.	0/0:6,0:6:2.97:0,3,20	./.	0/1:6,2:8:1.34:141,0,1
chr10	85424837	.	GC	G	5458.98	PASS	AB=0.920;AC=43;AF=0.768;AN=56;BaseQRankSum=3.044;DP=526;FS=15.361;HRun=13;HaplotypeScore=79.8691;InbreedingCoeff=0.4344;MQ=76.58;MQ0=0;MQRankSum=-1.901;QD=11.44;ReadPosRankSum=5.263;VQSLOD=2.8509;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,33:40:92.34:671,92,0	1/1:5,8:14:23.79:175,24,0	0/0:14,0:11:14.93:0,15,119	0/1:12,0:14:9.04:9,0,20	0/1:11,2:13:15.89:16,0,18	1/1:12,0:13:10.72:66,11,0	1/1:5,27:32:80.46:590,80,0	1/1:13,13:26:38.74:284,39,0	0/1:10,1:12:25.41:25,0,32	1/1:1,19:20:56.64:413,57,0	1/1:2,10:12:29.72:218,30,0	0/0:11,2:13:3.94:0,4,26	1/1:15,2:18:4.52:27,5,0	0/1:15,1:16:6.44:6,0,60	1/1:3,0:12:10.17:30,10,0	1/1:5,0:14:18.63:56,19,0	1/1:3,25:28:71.58:525,72,0	1/1:10,0:27:24.36:71,24,0	1/1:4,10:14:29.78:219,30,0	1/1:2,15:17:41.73:306,42,0	1/1:7,36:43:98.39:721,98,0	0/0:10,3:13:8.99:0,9,76	0/0:9,0:9:5.99:0,6,49	0/1:22,0:22:7.02:7,0,56	1/1:10,8:18:8.81:63,9,0	1/1:1,25:26:71.53:523,72,0	1/1:1,20:21:50.52:371,51,0	1/1:1,3:4:8.95:66,9,0
chr10	85428551	.	TCTC	T	4587.07	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=3.337;DP=589;FS=6.569;HRun=0;HaplotypeScore=112.8332;InbreedingCoeff=0.9865;MQ=82.28;MQ0=0;MQRankSum=-4.205;QD=36.70;ReadPosRankSum=-0.245;VQSLOD=5.2379;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:35:60.82:0,61,817	0/0:3,0:10:18.01:0,18,225	0/0:36,0:34:71.38:0,71,1343	0/0:42,0:35:76.60:0,77,1353	0/0:5,0:5:12.04:0,12,246	0/0:16,0:16:39.09:0,39,750	0/0:30,0:30:87.23:0,87,1718	1/1:3,23:25:60.17:875,60,0	0/0:25,0:25:69.24:0,69,1458	0/0:4,0:17:39.80:0,40,582	0/0:6,0:11:14.98:0,15,168	0/0:17,0:17:48.12:0,48,941	0/0:21,0:21:51.16:0,51,1046	0/0:29,0:29:75.25:0,75,1545	0/0:31,0:31:81.28:0,81,1722	0/0:17,0:17:42.14:0,42,882	0/0:7,0:29:49.69:0,50,640	0/0:23,0:23:48.14:0,48,937	1/1:1,22:23:69.22:1027,69,0	1/1:0,8:8:21.07:321,21,0	1/1:2,28:30:66.18:985,66,0	0/0:8,0:8:24.08:0,24,511	0/0:8,0:8:21.07:0,21,448	0/0:35,0:35:90.31:0,90,1916	0/0:19,0:19:48.15:0,48,966	1/1:5,8:13:27.09:414,27,0	1/1:2,17:19:45.15:689,45,0	1/1:0,6:6:18.06:276,18,0
chr10	85429780	.	A	AAAAAG	6136.24	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-10.654;DP=676;FS=2.732;HRun=0;HaplotypeScore=136.3120;InbreedingCoeff=0.9757;MQ=71.72;MQ0=1;MQRankSum=-0.251;QD=45.12;ReadPosRankSum=1.330;VQSLOD=5.0585;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,10:18:33.11:898,33,0	1/1:6,6:12:12.04:345,12,0	0/0:40,0:33:28.01:0,28,433	0/0:21,0:17:7.76:0,8,193	0/0:30,0:30:63.21:0,63,1139	0/0:25,0:25:54.19:0,54,989	0/0:26,0:26:45.14:0,45,793	0/0:31,0:31:41.61:0,42,658	0/0:31,0:31:60.21:0,60,1086	1/1:10,21:33:69.16:1699,69,0	1/1:11,12:23:36.12:953,36,0	0/0:37,0:37:81.26:0,81,1475	0/0:18,0:18:39.12:0,39,664	0/0:23,0:23:51.17:0,51,906	0/0:29,0:29:60.21:0,60,1125	0/0:21,0:21:51.15:0,51,883	1/1:5,18:24:45.15:1254,45,0	1/1:10,15:26:36.12:989,36,0	0/0:19,0:19:33.10:0,33,562	0/0:28,0:28:45.15:0,45,837	0/0:15,0:15:30.08:0,30,489	0/0:23,0:23:51.16:0,51,926	0/0:24,0:24:51.17:0,51,942	0/0:7,0:7:18.06:0,18,337	0/0:14,0:14:30.10:0,30,562	0/0:39,0:39:81.26:0,81,1447	0/0:28,0:28:69.22:0,69,1243	0/0:9,0:9:21.07:0,21,394
chr10	85430471	.	G	GCACA	4213.35	PASS	AC=32;AF=0.593;AN=54;BaseQRankSum=5.325;DP=680;FS=14.160;HRun=0;HaplotypeScore=150.5427;InbreedingCoeff=0.8964;MQ=58.62;MQ0=14;MQRankSum=-6.174;QD=10.51;ReadPosRankSum=-4.365;VQSLOD=2.0656;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:37:6.02:98,6,0	1/1:7,4:13:20.53:331,21,0	./.	0/0:23,0:9:3.01:0,3,46	0/0:16,0:21:11.01:0,11,392	0/0:17,0:20:32.84:0,33,451	1/1:26,1:35:9.50:176,10,0	1/1:27,0:24:24.45:279,24,0	0/0:22,0:24:48.12:0,48,661	1/1:12,9:23:29.39:369,29,0	1/1:9,4:15:8.62:154,9,0	0/0:21,0:24:48.14:0,48,692	0/0:24,0:26:42.11:0,42,574	0/0:27,0:32:54.15:0,54,748	1/1:13,1:24:19.88:330,20,0	1/1:18,0:28:13.93:140,14,0	1/1:15,15:32:35.36:639,35,0	1/1:20,2:29:21.05:304,21,0	1/1:19,0:18:17.83:250,18,0	1/1:17,0:16:4.25:55,4,0	1/1:35,0:31:15.05:205,15,0	0/0:17,0:20:35.31:0,35,459	0/0:17,0:18:18.05:0,18,257	0/0:35,0:45:98.18:0,98,1267	0/0:14,0:17:21.06:0,21,291	1/1:21,0:23:32.54:450,33,0	1/1:8,0:22:8.96:143,9,0	1/1:15,0:15:23.85:290,24,0
chr10	85430505	.	A	ACA	1505.60	PASS	AB=0.911;AC=33;AF=0.589;AN=56;BaseQRankSum=6.177;DP=758;FS=20.527;HRun=0;HaplotypeScore=114.9008;InbreedingCoeff=0.7420;MQ=58.63;MQ0=15;MQRankSum=-2.211;QD=3.25;ReadPosRankSum=-3.861;VQSLOD=-0.7428;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:33:5.97:46,6,0	1/1:11,0:11:21.02:236,21,0	0/1:34,0:21:0:0,0,0	0/0:33,0:16:1.24:0,1,30	0/1:26,0:25:55.44:55,0,241	0/0:25,0:24:32.51:0,33,325	1/1:27,0:25:8.79:78,9,0	1/1:25,0:26:12.01:61,12,0	0/0:29,0:29:47.61:0,48,468	1/1:25,0:25:23.38:244,23,0	1/1:17,0:17:9.01:97,9,0	0/0:34,0:34:47.79:0,48,488	0/0:28,0:28:41.60:0,42,401	0/0:35,0:35:53.31:0,53,505	1/1:28,0:28:19.21:153,19,0	1/1:21,0:26:9.92:69,10,0	1/1:29,0:30:27:253,27,0	1/1:24,0:24:3:26,3,0	1/1:20,0:23:7.88:28,8,0	0/1:14,1:21:0:0,0,0	1/1:31,0:34:11.07:83,11,0	0/0:27,0:26:32.57:0,33,310	0/0:24,0:24:17.88:0,18,181	0/0:45,0:45:96.51:0,97,883	0/0:15,0:15:20.72:0,21,196	1/1:31,0:34:17.68:138,18,0	1/1:19,0:19:5.74:52,6,0	1/1:7,0:14:16.39:85,16,0
chr10	85430850	.	AT	A	3599.68	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.322;DP=590;FS=5.687;HRun=9;HaplotypeScore=70.8146;InbreedingCoeff=0.9988;MQ=80.86;MQ0=0;MQRankSum=-2.275;QD=21.17;ReadPosRankSum=-1.064;VQSLOD=3.9788;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:99:0,111,1248	0/0:8,0:8:24.07:0,24,277	0/0:18,0:18:33.81:0,34,426	0/0:12,0:12:28.89:0,29,301	0/0:26,0:26:75.21:0,75,857	0/0:14,0:14:33.10:0,33,381	0/0:22,0:22:60.18:0,60,688	1/1:7,20:27:59.99:543,60,0	0/0:18,0:19:48.14:0,48,554	0/0:19,0:19:54.16:0,54,623	0/0:17,0:17:42.12:0,42,484	0/0:20,0:20:54.16:0,54,623	0/0:23,0:23:63.19:0,63,727	0/0:21,0:21:54.16:0,54,623	0/0:16,0:16:36.11:0,36,415	0/0:19,0:19:54.16:0,54,622	0/0:37,0:37:99:0,102,1153	0/0:17,0:17:45.13:0,45,519	1/1:8,17:25:50.99:461,51,0	1/1:3,12:15:27:247,27,0	1/1:2,22:24:60.03:549,60,0	0/0:18,0:18:48.14:0,48,554	0/0:20,0:20:57.15:0,57,640	0/0:19,0:19:54.16:0,54,623	0/0:16,0:16:42.11:0,42,474	1/1:6,33:39:67.41:866,67,0	1/1:3,29:32:78.03:714,78,0	1/1:0,8:8:24.01:220,24,0
chr10	85432475	.	G	GA	4592.43	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-6.748;DP=666;FS=10.492;HRun=7;HaplotypeScore=66.7401;InbreedingCoeff=0.9932;MQ=81.72;MQ0=0;MQRankSum=-2.804;QD=29.07;ReadPosRankSum=-2.083;VQSLOD=4.2286;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,126,1216	0/0:13,0:13:39.06:0,39,376	0/0:19,0:19:48.07:0,48,461	0/0:16,0:16:19.90:0,20,203	0/0:23,0:23:60.09:0,60,579	0/0:21,0:21:57.07:0,57,544	0/0:25,0:25:66.09:0,66,632	1/1:8,16:24:48.13:566,48,0	0/0:27,0:27:72.10:0,72,690	0/0:24,0:24:66.11:0,66,637	0/0:15,0:15:33.05:0,33,319	0/0:26,0:26:75.12:0,75,724	0/0:24,0:24:66.11:0,66,637	0/0:29,0:29:72.08:0,72,689	0/0:33,0:33:96.14:0,96,921	0/0:22,0:22:66.11:0,66,637	0/0:34,0:34:96.15:0,96,927	0/0:20,0:20:57.09:0,57,550	1/1:4,19:23:57.16:673,57,0	1/1:2,16:18:51.16:613,51,0	1/1:3,36:40:93.29:1122,93,0	0/0:11,0:11:27.04:0,27,260	0/0:19,0:19:48.02:0,48,453	0/0:42,0:42:99:0,114,1101	0/0:19,0:19:54.09:0,54,521	1/1:0,20:20:60.17:712,60,0	1/1:4,23:27:63.19:761,63,0	1/1:1,5:6:12.04:145,12,0
chr10	85432732	.	GT	G	1628.40	PASS	AB=0.793;AC=15;AF=0.278;AN=54;BaseQRankSum=3.160;DP=401;FS=0.451;HRun=12;HaplotypeScore=54.0003;InbreedingCoeff=0.5596;MQ=73.61;MQ0=2;MQRankSum=-1.116;QD=10.71;ReadPosRankSum=1.240;VQSLOD=2.8200;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:32:63.15:0,63,372	0/0:1,0:7:14.36:0,14,82	0/0:19,0:11:4.95:0,5,95	0/0:9,1:8:3.35:0,3,16	0/0:15,2:18:1.53:0,2,357	0/0:17,1:18:24.86:0,25,434	0/0:3,0:11:20.01:0,20,105	0/1:12,9:22:21.33:172,0,21	0/0:11,0:11:30.05:0,30,298	0/0:3,0:18:45.28:0,45,225	0/0:5,1:15:11.62:0,12,173	0/0:12,1:13:6.81:0,7,239	0/0:12,0:12:22.60:0,23,258	0/0:15,0:15:39.08:0,39,395	0/0:17,0:18:37.91:0,38,399	0/1:8,2:10:22.34:22,0,146	0/0:2,0:11:22.73:0,23,114	1/1:3,0:19:32.59:94,33,0	1/1:4,10:14:2.41:201,2,0	1/1:2,14:16:32.82:255,33,0	1/1:2,12:14:32.87:255,33,0	0/0:2,0:2:6:0,6,55	0/1:10,2:12:16.09:16,0,193	0/0:3,0:3:9.02:0,9,91	0/0:14,1:15:18.83:0,19,361	1/1:4,23:27:68.71:530,69,0	1/1:3,15:18:11.23:260,11,0	./.
chr10	85433137	.	A	AT	1322.97	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-6.270;DP=572;FS=0.000;HRun=9;HaplotypeScore=80.2606;InbreedingCoeff=0.8394;MQ=74.35;MQ0=7;MQRankSum=0.244;QD=9.95;ReadPosRankSum=2.362;VQSLOD=2.5074;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:76.50:0,77,606	0/0:4,0:4:9.15:0,9,63	0/1:36,0:20:11.13:11,0,137	0/0:34,0:16:2.95:0,3,58	0/0:19,0:19:53.91:0,54,450	0/0:15,0:15:41.96:0,42,358	0/0:20,0:20:50.89:0,51,423	0/0:36,0:36:86.82:0,87,722	0/0:14,0:14:29.94:0,30,250	0/0:16,0:16:32.61:0,33,248	0/0:17,0:18:44.01:0,44,332	1/1:4,15:19:33.09:360,33,0	1/1:3,9:12:21.06:229,21,0	1/1:3,11:14:24.06:261,24,0	1/1:5,14:18:30.08:327,30,0	1/1:2,14:16:27.07:289,27,0	0/0:33,0:33:89.20:0,89,723	1/1:17,0:17:5.49:30,5,0	0/0:30,0:31:70.89:0,71,583	0/0:19,0:19:47.94:0,48,405	0/0:22,0:22:59.97:0,60,517	0/0:16,0:16:35.27:0,35,318	0/0:10,0:10:23.94:0,24,198	0/0:22,0:22:47.16:0,47,409	0/0:25,0:25:68.93:0,69,580	0/0:20,0:20:56.27:0,56,459	0/0:23,0:22:59.86:0,60,493	0/0:11,0:11:29.99:0,30,260
chr10	85433336	.	A	AGGGCCTT	17904.71	PASS	AB=0.714;AC=25;AF=0.463;AN=54;BaseQRankSum=1.722;DP=572;FS=0.733;HRun=0;HaplotypeScore=114.9680;InbreedingCoeff=0.7770;MQ=49.30;MQ0=10;MQRankSum=-16.896;QD=73.38;ReadPosRankSum=-2.493;VQSLOD=4.2738;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,129,3361	0/0:7,0:7:18.06:0,18,426	0/1:15,0:3:32.70:33,0,67	./.	0/0:34,0:34:99:0,99,2602	0/0:17,0:17:51.14:0,51,1261	0/0:24,0:24:69.24:0,69,1827	1/1:7,5:13:33.11:1048,33,0	0/0:28,0:28:84.27:0,84,2109	0/0:21,0:21:57.19:0,57,1482	0/0:25,0:24:69.22:0,69,1751	1/1:3,14:16:45.15:1728,45,0	1/1:6,17:25:60.21:2321,60,0	1/1:4,11:15:33.11:1345,33,0	1/1:5,18:25:60.21:2267,60,0	1/1:4,9:15:30.10:1181,30,0	0/0:37,0:37:99:0,105,2818	1/1:2,1:13:33.10:1145,33,0	0/1:6,6:19:2.53:1291,0,3	1/1:3,15:21:45.15:1739,45,0	1/1:6,7:16:26.96:648,27,0	0/0:14,0:14:42.14:0,42,1070	0/0:13,0:13:39.13:0,39,1051	0/0:34,0:34:96.31:0,96,2455	0/0:19,0:18:57.18:0,57,1480	0/1:3,11:17:38.70:1461,0,39	1/1:4,16:20:39.13:1575,39,0	1/1:0,1:2:3.01:123,3,0
chr10	85433338	.	C	CCTTGT	6883.67	PASS	AB=0.870;AC=23;AF=0.426;AN=54;BaseQRankSum=16.668;DP=542;FS=0.000;HRun=0;HaplotypeScore=127.7009;InbreedingCoeff=0.6761;MQ=49.54;MQ0=8;MQRankSum=-16.832;QD=33.91;ReadPosRankSum=-0.707;VQSLOD=4.4639;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,2951	0/0:6,0:6:18.06:0,18,417	0/0:14,0:3:5.61:0,6,64	./.	0/0:35,0:35:99:0,102,2284	0/0:17,0:17:48.16:0,48,1092	0/0:24,0:24:69.24:0,69,1603	1/1:11,0:9:24.04:363,24,0	0/0:28,0:28:84.29:0,84,1871	0/0:21,0:21:60.13:0,60,1295	0/0:24,0:23:66.23:0,66,1535	1/1:18,0:16:1.26:629,1,0	1/1:24,0:24:60.16:925,60,0	1/1:15,0:13:11.13:511,11,0	1/1:25,0:24:60.13:897,60,0	1/1:16,0:14:30.09:466,30,0	0/0:37,0:37:99:0,108,2463	0/1:5,9:14:13.17:751,0,13	0/1:11,0:11:34.41:305,0,34	1/1:18,0:17:45.05:696,45,0	1/1:15,0:14:5.66:223,6,0	0/0:15,0:15:42.14:0,42,969	0/0:13,0:13:39.13:0,39,908	0/0:34,0:34:96.31:0,96,2150	0/0:19,0:18:54.19:0,54,1257	0/1:14,0:14:57.73:464,0,58	1/1:20,0:19:39.13:609,39,0	1/1:2,0:2:3.01:45,3,0
chr10	85434283	.	C	CT	572.96	PASS	AB=0.874;AC=14;AF=0.250;AN=56;BaseQRankSum=0.961;DP=370;FS=0.000;HRun=13;HaplotypeScore=53.8133;InbreedingCoeff=0.2752;MQ=74.97;MQ0=0;MQRankSum=-0.192;QD=4.62;ReadPosRankSum=-0.441;VQSLOD=0.7915;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:46:99:0,105,707	0/0:5,0:5:5.94:0,6,41	1/1:15,0:12:0.61:36,1,0	0/1:14,0:10:11.98:27,0,12	0/0:11,0:11:17.80:0,18,123	0/0:17,0:17:26.64:0,27,183	0/0:15,0:15:26.35:0,26,173	0/1:20,1:25:35.73:36,0,164	0/0:10,0:10:17.76:0,18,123	0/0:10,0:11:25.83:0,26,170	0/0:6,0:8:5.88:0,6,41	1/1:8,5:13:26.19:211,26,0	1/1:6,2:8:4.58:73,5,0	0/1:4,0:5:11.41:26,0,11	0/0:10,0:10:17.81:0,18,123	0/0:10,0:10:14.71:0,15,99	0/0:20,0:20:44.56:0,45,308	1/1:3,13:16:30.03:279,30,0	0/0:15,0:15:29.72:0,30,205	0/1:3,1:5:15.93:16,0,50	0/0:15,0:15:26.73:0,27,184	0/0:7,0:7:14.84:0,15,103	0/1:7,3:10:13.64:23,0,14	0/0:23,0:22:32.40:0,32,226	0/0:2,0:2:2.97:0,3,21	0/0:17,1:18:1.82:0,2,156	0/1:9,2:11:7.95:8,0,89	0/0:2,0:3:5.01:0,5,26
chr10	85434309	.	T	TC	752.74	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-2.440;DP=329;FS=6.357;HRun=3;HaplotypeScore=43.3357;InbreedingCoeff=0.7742;MQ=68.20;MQ0=6;MQRankSum=-4.137;QD=20.91;ReadPosRankSum=-0.415;VQSLOD=2.6525;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,102,1151	0/0:3,0:2:3.01:0,3,36	0/0:20,0:11:21.01:0,21,203	0/0:10,0:3:2.90:0,3,16	0/0:7,0:7:21.04:0,21,229	0/0:12,0:12:30.08:0,30,343	0/0:11,0:11:26.70:0,27,280	0/0:21,0:20:45.07:0,45,507	0/0:3,0:3:9.03:0,9,107	0/0:11,0:11:27.05:0,27,308	0/0:7,0:7:14.90:0,15,147	1/1:4,11:15:30.06:383,30,0	1/1:1,5:6:12.04:161,12,0	1/1:2,1:3:3.01:40,3,0	1/1:1,8:9:18.06:243,18,0	1/1:1,2:3:6.02:81,6,0	0/0:21,0:21:57.09:0,57,627	0/0:14,0:14:30.05:0,30,340	0/0:13,0:12:27.07:0,27,304	0/0:7,0:7:18.06:0,18,215	0/0:19,0:18:48.11:0,48,541	0/0:5,0:5:9.02:0,9,102	0/0:8,0:8:14.79:0,15,140	0/0:27,0:26:57.11:0,57,650	0/0:6,0:6:18.03:0,18,189	0/0:11,0:11:30.08:0,30,350	0/0:10,0:10:17.97:0,18,173	0/0:2,0:2:3.01:0,3,36
chr10	85436136	.	GT	G	3913.54	PASS	AB=0.933;AC=19;AF=0.339;AN=56;BaseQRankSum=9.299;DP=562;FS=2.614;HRun=10;HaplotypeScore=64.7826;InbreedingCoeff=0.9004;MQ=75.15;MQ0=0;MQRankSum=-0.406;QD=18.64;ReadPosRankSum=1.430;VQSLOD=4.5509;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,2:22:11.06:0,11,578	0/0:8,0:8:23.89:0,24,239	0/0:17,0:14:14.74:0,15,195	0/1:13,1:13:16.04:16,0,58	0/0:29,0:29:72.15:0,72,783	0/0:10,0:10:28.88:0,29,295	0/0:24,0:24:63.13:0,63,671	1/1:2,31:33:92.97:807,93,0	0/0:21,0:22:56.97:0,57,597	0/0:16,0:16:39.09:0,39,417	0/0:21,0:21:51.12:0,51,552	0/0:23,0:23:57.13:0,57,616	0/0:17,0:19:44.93:0,45,461	0/0:16,0:16:48.11:0,48,522	1/1:3,23:26:65.98:573,66,0	1/1:1,13:14:23.84:208,24,0	0/0:18,0:18:48.13:0,48,530	0/0:4,0:12:28.53:0,29,160	1/1:3,23:26:68.94:591,69,0	1/1:4,21:25:36.85:470,37,0	1/1:5,14:19:16.02:266,16,0	0/0:18,1:20:16.78:0,17,388	0/0:26,0:28:72.01:0,72,762	0/0:28,0:28:81.21:0,81,884	0/0:18,0:18:54.15:0,54,597	1/1:5,13:18:38.97:339,39,0	1/1:5,25:31:56.58:565,57,0	1/1:1,3:4:9:78,9,0
chr10	85437194	.	G	GGAGTCACCACCAC	50872.01	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-2.271;DP=745;FS=3.145;HRun=0;HaplotypeScore=245.5522;InbreedingCoeff=0.9996;MQ=68.07;MQ0=0;MQRankSum=-20.915;QD=150.06;ReadPosRankSum=-1.262;VQSLOD=4.9180;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.15:0,45,1750	0/0:12,0:12:36.12:0,36,1438	0/0:25,0:24:66.20:0,66,2125	0/0:23,0:22:60.21:0,60,2220	0/0:31,0:31:93.32:0,93,3716	0/0:27,0:27:78.27:0,78,3060	0/0:16,0:16:42.13:0,42,1533	1/1:34,4:42:99:5850,111,0	0/0:28,0:28:84.29:0,84,3245	0/0:33,0:33:96.33:0,96,3662	0/0:24,0:24:69.22:0,69,2543	1/1:19,13:34:96.33:5471,96,0	1/1:13,8:23:63.22:3587,63,0	1/1:11,8:19:57.20:3190,57,0	1/1:16,15:33:90.31:5565,90,0	1/1:18,13:33:87.30:5131,87,0	0/0:25,0:25:69.24:0,69,2701	0/0:31,0:31:87.30:0,87,3445	1/1:10,4:15:30.09:1771,30,0	1/1:20,21:45:99:6114,102,0	1/1:12,5:17:24.08:1481,24,0	0/0:30,0:30:81.28:0,81,3211	0/0:31,0:31:93.31:0,93,3511	0/0:28,0:28:81.28:0,81,3192	0/0:25,0:24:69.24:0,69,2726	1/1:10,17:30:90.28:5077,90,0	1/1:18,12:36:90.31:5501,90,0	1/1:3,8:11:33.11:2133,33,0
chr10	85437982	.	A	ATTT	6755.95	PASS	AB=0.766;AC=38;AF=0.679;AN=56;BaseQRankSum=10.572;DP=557;FS=5.128;HRun=9;HaplotypeScore=125.1950;InbreedingCoeff=0.8405;MQ=76.49;MQ0=1;MQRankSum=-0.624;QD=16.32;ReadPosRankSum=0.284;VQSLOD=2.1324;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:34:72.22:1352,72,0	1/1:0,9:9:21.07:414,21,0	0/1:26,0:24:1.49:1,0,313	0/0:17,0:17:5.17:0,5,219	0/0:23,0:25:51.14:0,51,622	0/0:15,0:15:36.08:0,36,453	1/1:4,13:17:27.09:533,27,0	1/1:30,0:30:42.48:144,42,0	0/0:12,0:12:31.72:0,32,414	1/1:10,12:23:36.12:674,36,0	1/1:2,13:15:30.06:532,30,0	1/1:2,0:21:24.17:69,24,0	1/1:0,0:9:8.72:19,9,0	0/1:5,0:21:13.57:42,0,14	1/1:4,0:17:26.90:207,27,0	1/1:3,1:25:65.27:523,65,0	1/1:3,17:20:39.13:752,39,0	1/1:4,14:19:45.13:833,45,0	1/1:22,0:22:13.87:43,14,0	1/1:30,0:30:55.02:210,55,0	1/1:13,0:13:18.94:51,19,0	0/0:17,0:17:45.14:0,45,568	0/0:21,0:21:42.02:0,42,502	0/0:20,0:20:57.14:0,57,692	0/0:16,0:16:36.06:0,36,454	1/1:23,1:24:33.43:157,33,0	1/1:26,0:26:35.82:105,36,0	1/1:11,0:11:23.46:93,23,0
chr10	85437984	.	T	TTA	7231.14	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=-3.558;DP=554;FS=5.338;HRun=0;HaplotypeScore=111.6286;InbreedingCoeff=0.6798;MQ=75.37;MQ0=1;MQRankSum=-3.276;QD=27.92;ReadPosRankSum=-0.278;VQSLOD=5.9860;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:2.33:2,0,62	1/1:9,0:9:2.73:10,3,0	0/0:25,0:22:48.60:0,49,543	0/0:16,0:16:30.56:0,31,382	0/0:26,0:26:73.98:0,74,945	0/0:14,0:14:42.12:0,42,601	0/0:18,0:18:20.85:0,21,112	1/1:1,31:31:93.02:1421,93,0	0/0:12,0:12:35.61:0,36,513	0/0:21,0:21:17.52:0,18,256	0/1:15,0:15:17.71:18,0,57	0/0:21,0:21:32.19:0,32,184	0/0:9,0:9:17.47:0,17,61	0/0:20,0:20:46.44:0,46,230	0/1:17,0:17:69.56:127,0,70	0/1:25,0:25:4.35:301,0,4	0/0:21,0:20:7.01:0,7,23	0/0:19,0:19:5.45:0,5,84	1/1:1,21:22:63.09:1001,63,0	1/1:1,28:29:75.11:1227,75,0	1/1:0,13:13:30.10:529,30,0	0/0:17,0:17:48.15:0,48,712	0/0:21,0:21:57.08:0,57,754	0/0:20,0:20:60.20:0,60,894	0/0:15,0:15:45.07:0,45,622	1/1:4,21:26:70.74:1116,71,0	1/1:0,27:27:54.06:952,54,0	1/1:1,10:11:30.10:528,30,0
chr10	85438355	.	A	AAC	1875.49	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=1.842;DP=393;FS=16.647;HRun=0;HaplotypeScore=133.5985;InbreedingCoeff=0.5506;MQ=30.58;MQ0=18;MQRankSum=-2.038;QD=7.69;ReadPosRankSum=3.526;VQSLOD=2.5138;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,3:12:14.73:144,15,0	0/1:3,0:2:0:0,0,0	0/0:11,0:3:9.03:0,9,118	0/0:15,0:1:3.01:0,3,36	0/0:21,0:21:4.77:0,5,50	0/0:18,0:17:8.51:0,9,212	1/1:9,0:7:6.79:46,7,0	0/1:25,0:23:99:113,0,115	0/0:13,0:12:9.14:0,9,84	1/1:12,2:12:18.70:147,19,0	1/1:8,1:9:4.25:37,4,0	1/1:11,1:12:2.05:35,2,0	1/1:11,0:10:7.22:46,7,0	1/1:8,3:11:13.95:98,14,0	0/0:17,0:15:3.19:0,3,9	0/0:11,0:11:6.90:0,7,51	1/1:9,2:10:14.92:162,15,0	1/1:10,1:11:24.92:245,25,0	1/1:21,2:13:23.54:324,24,0	1/1:17,0:16:1.02:42,1,0	1/1:10,3:12:2.22:7,2,0	0/0:15,0:14:3.58:0,4,45	0/0:16,0:16:14.66:0,15,135	0/0:12,0:12:8.18:0,8,61	0/1:15,0:15:13.34:13,0,136	1/1:24,1:24:34.81:328,35,0	1/1:10,1:12:17.72:150,18,0	1/1:8,0:8:13.80:119,14,0
chr10	85438828	.	ATC	A	11881.72	PASS	AB=0.514;AC=23;AF=0.411;AN=56;BaseQRankSum=15.906;DP=638;FS=0.943;HRun=0;HaplotypeScore=79.7220;InbreedingCoeff=0.9597;MQ=83.86;MQ0=0;MQRankSum=-2.744;QD=41.98;ReadPosRankSum=-0.191;VQSLOD=6.3060;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1946	0/0:8,0:8:24.08:0,24,464	0/0:21,0:21:63.15:0,63,1129	0/0:17,0:17:48.14:0,48,881	0/0:31,0:31:93.32:0,93,1784	0/0:34,0:34:99:0,102,1934	0/0:17,0:17:51.16:0,51,950	1/1:3,31:34:96.31:1447,96,0	0/0:19,0:19:57.20:0,57,1100	0/0:23,0:23:66.23:0,66,1266	0/0:23,0:23:69.24:0,69,1322	1/1:1,20:21:54.18:827,54,0	1/1:0,32:32:93.32:1421,93,0	1/1:0,27:27:72.24:1102,72,0	1/1:0,21:21:63.21:965,63,0	0/1:1,18:19:0.76:770,0,1	0/0:14,0:14:42.13:0,42,777	0/0:24,0:24:69.24:0,69,1332	1/1:2,20:22:60.19:898,60,0	1/1:0,27:27:78.26:1194,78,0	1/1:1,10:11:30.10:459,30,0	0/0:25,0:25:75.26:0,75,1447	0/0:22,0:22:66.16:0,66,1201	0/0:13,0:13:39.13:0,39,753	0/0:30,0:30:90.29:0,90,1693	1/1:0,27:27:81.28:1239,81,0	1/1:3,25:28:66.22:1010,66,0	1/1:0,14:14:36.12:551,36,0
chr10	85440138	.	T	TTGG	1663.22	PASS	AC=32;AF=0.640;AN=50;BaseQRankSum=2.630;DP=474;FS=2.681;HRun=0;HaplotypeScore=85.3453;InbreedingCoeff=0.7369;MQ=71.72;MQ0=13;MQRankSum=-2.257;QD=7.29;ReadPosRankSum=-0.365;VQSLOD=2.4203;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:23:8.28:56,8,0	./.	0/0:45,0:20:8.19:0,8,55	0/0:65,0:38:5.11:0,5,149	0/0:11,0:12:15.01:0,15,178	0/0:20,0:20:18.06:0,18,242	1/1:15,0:15:14.22:114,14,0	1/1:11,0:11:5.93:61,6,0	0/0:20,0:20:27.09:0,27,363	1/1:21,0:20:9.02:116,9,0	1/1:5,0:5:2.60:10,3,0	1/1:13,6:18:17.93:302,18,0	1/1:10,8:18:15.05:292,15,0	1/1:13,12:24:24.19:465,24,0	1/1:2,0:2:3.01:32,3,0	1/1:9,0:9:12:116,12,0	1/1:16,0:15:14.44:106,14,0	./.	1/1:16,0:16:6.01:59,6,0	./.	1/1:20,0:19:2.98:21,3,0	0/0:14,0:14:23.44:0,23,290	0/0:12,0:12:12.04:0,12,161	0/0:30,0:30:63.18:0,63,830	0/0:14,0:14:14.88:0,15,157	1/1:15,0:13:2.69:7,3,0	1/1:8,0:8:5.98:54,6,0	1/1:5,0:5:3.01:34,3,0
chr10	85440601	.	C	CA	1193.65	PASS	AB=0.919;AC=19;AF=0.380;AN=50;BaseQRankSum=0.779;DP=466;FS=8.012;HRun=12;HaplotypeScore=84.8174;InbreedingCoeff=0.4376;MQ=39.64;MQ0=34;MQRankSum=-2.579;QD=5.53;ReadPosRankSum=-2.242;VQSLOD=1.5353;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:4:2.46:0,2,9	0/0:1,0:1:2.68:0,3,11	./.	./.	0/0:33,1:34:26.12:0,26,130	0/0:15,0:11:17.08:0,17,97	0/0:10,0:9:3.33:0,3,43	0/1:14,12:21:35.70:162,0,36	0/0:19,0:17:22.19:0,22,113	0/1:9,0:7:9.54:10,0,10	1/1:6,0:6:3.41:14,3,0	0/1:15,0:14:1.74:2,0,80	0/0:19,0:17:15.11:0,15,97	0/0:17,0:17:5.14:0,5,42	1/1:4,10:13:10.21:81,10,0	1/1:7,10:15:27.04:263,27,0	0/1:7,0:7:13.11:13,0,14	0/0:14,0:14:13.06:0,13,45	0/1:23,0:21:9.83:243,0,10	1/1:21,0:20:8.07:34,8,0	1/1:17,0:15:2.80:13,3,0	0/0:22,0:22:25.82:0,26,181	0/0:19,0:17:6.07:0,6,69	0/0:25,0:23:15.12:0,15,122	0/0:24,0:23:43.95:0,44,326	1/1:32,0:31:36.21:408,36,0	1/1:22,0:20:18.53:118,19,0	./.
chr10	85440610	.	AAAAGATAGAT	A	304.55	PASS	AB=0.600;AC=1;AF=0.020;AN=50;BaseQRankSum=2.294;DP=465;FS=11.979;HRun=0;HaplotypeScore=144.2439;InbreedingCoeff=-0.0351;MQ=41.19;MQ0=34;MQRankSum=-2.272;QD=20.30;ReadPosRankSum=1.631;VQSLOD=2.4679;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:3:8.95:0,9,82	0/0:1,0:1:3.01:0,3,34	./.	./.	0/0:36,0:32:61.53:0,62,753	0/0:15,0:11:30.01:0,30,497	0/0:8,0:7:17.99:0,18,231	0/0:29,0:21:50.90:0,51,492	0/0:19,0:18:18.55:0,19,534	0/0:5,0:4:10.78:0,11,105	0/0:4,0:4:11.85:0,12,91	0/0:16,0:15:26.98:0,27,400	0/0:24,0:22:32.58:0,33,446	0/0:17,0:17:28.57:0,29,338	0/0:17,0:14:35.83:0,36,733	0/0:19,0:18:48.03:0,48,1450	0/0:7,0:7:15.37:0,15,154	0/1:5,10:15:28.68:378,0,29	0/0:24,0:19:56.06:0,56,660	0/0:24,0:23:21.57:0,22,281	0/0:16,0:14:8.94:0,9,100	0/0:24,0:21:45.02:0,45,1412	0/0:16,0:13:19.50:0,19,268	0/0:25,0:23:38.96:0,39,571	0/0:23,0:22:56.34:0,56,1965	0/0:33,0:32:78.06:0,78,1062	0/0:26,0:22:24.31:0,24,398	./.
chr10	85440612	.	AAGAT	A	2977.05	PASS	AC=28;AF=0.778;AN=36;BaseQRankSum=1.764;DP=466;FS=9.102;HRun=0;HaplotypeScore=99.4680;InbreedingCoeff=0.8812;MQ=42.03;MQ0=33;MQRankSum=1.203;QD=9.67;ReadPosRankSum=-0.427;VQSLOD=1.7657;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:30,5:32:33.11:478,33,0	1/1:14,2:13:24.07:343,24,0	./.	./.	1/1:14,3:18:27.08:390,27,0	./.	./.	1/1:13,3:15:12.03:162,12,0	1/1:14,11:23:11.96:154,12,0	1/1:17,0:17:12.04:174,12,0	0/0:18,0:15:18.06:0,18,287	0/0:19,0:18:33.11:0,33,576	./.	1/1:15,0:15:14.50:118,15,0	1/1:23,1:19:17.90:175,18,0	1/1:25,0:23:20.92:230,21,0	1/1:15,0:13:3:27,3,0	0/0:24,0:21:27.09:0,27,541	1/1:14,1:12:9.03:124,9,0	1/1:21,4:23:16.79:241,17,0	0/0:22,0:21:36.12:0,36,789	1/1:33,0:32:26.26:398,26,0	1/1:28,0:24:11.99:108,12,0	./.
chr10	85440613	.	AGAT	A	3598.12	PASS	AB=0.941;AC=26;AF=0.520;AN=50;BaseQRankSum=2.497;DP=437;FS=4.924;HRun=0;HaplotypeScore=85.7430;InbreedingCoeff=-0.1339;MQ=42.90;MQ0=33;MQRankSum=-0.238;QD=9.91;ReadPosRankSum=-1.699;VQSLOD=2.5736;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:1:2.50:0,2,9	0/0:1,0:1:2.68:0,3,11	./.	./.	0/1:34,0:30:0.86:319,0,1	0/1:17,0:14:10.80:274,0,11	0/0:7,0:7:3.34:0,3,43	0/1:25,0:17:35.70:162,0,36	0/1:18,0:18:10.87:242,0,11	0/1:3,0:4:9.54:11,0,10	1/1:2,0:3:4.30:16,4,0	0/1:12,3:14:44.70:105,0,45	0/1:24,0:22:43.21:69,0,43	0/1:15,0:15:25.16:135,0,25	0/1:16,0:13:0.57:1,0,226	0/1:15,0:14:19.21:19,0,388	0/1:5,0:7:12.89:13,0,13	0/1:14,0:14:2.50:75,0,3	1/1:9,12:18:6.16:424,6,0	1/1:1,20:21:21.06:297,21,0	1/1:3,11:12:3.01:56,3,0	0/0:24,0:21:35.98:0,36,606	0/1:15,0:12:26.69:71,0,27	0/1:19,4:21:39.28:137,0,39	0/0:22,0:21:44.16:0,44,836	1/1:4,28:31:56.79:892,57,0	1/1:5,21:23:19.23:283,19,0	./.
chr10	85440839	.	TA	T	1003.62	PASS	AB=0.860;AC=8;AF=0.182;AN=44;BaseQRankSum=2.713;DP=433;FS=5.299;HRun=1;HaplotypeScore=121.5056;InbreedingCoeff=-0.0201;MQ=50.07;MQ0=4;MQRankSum=-1.322;QD=7.33;ReadPosRankSum=-3.768;VQSLOD=-0.6123;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:27,0:24:69.22:0,69,1038	0/0:28,0:22:48.67:0,49,761	0/0:14,0:14:30.10:0,30,469	0/0:18,0:16:48.16:0,48,767	./.	0/1:16,19:34:99:728,0,161	0/0:29,0:29:78.25:0,78,1211	./.	./.	0/1:27,2:29:26.95:27,0,82	0/0:18,0:18:18.23:0,18,122	0/1:17,3:20:30.77:31,0,88	0/0:34,0:33:35.64:0,36,289	0/0:17,0:17:21.54:0,22,66	./.	0/0:9,0:9:1.01:0,1,99	0/1:10,7:15:99:213,0,242	1/1:13,0:13:4.45:35,4,0	0/0:11,0:11:6.02:0,6,82	0/0:15,0:15:45.15:0,45,708	0/0:15,0:15:35.92:0,36,570	0/0:32,1:33:93.19:0,93,1470	0/0:11,0:11:33.11:0,33,528	0/1:18,0:16:70.32:70,0,107	0/0:16,0:16:18.18:0,18,120	0/1:5,0:5:24.81:25,0,44
chr10	85440840	.	A	AGATAGATAGAT	12259.77	PASS	AB=0.623;AC=24;AF=0.545;AN=44;BaseQRankSum=-1.731;DP=447;FS=0.453;HRun=0;HaplotypeScore=163.4783;InbreedingCoeff=0.7658;MQ=51.28;MQ0=4;MQRankSum=-9.043;QD=47.15;ReadPosRankSum=-0.813;VQSLOD=4.5657;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:27,0:24:60.15:0,60,1260	0/0:25,0:21:42.66:0,43,853	0/0:14,0:14:30.10:0,30,912	0/0:17,0:15:48.16:0,48,1310	./.	1/1:29,0:34:81.25:1745,81,0	0/0:28,0:28:78.04:0,78,2342	./.	./.	1/1:11,11:30:18.06:767,18,0	0/1:7,8:18:4.78:334,0,5	1/1:5,8:21:6.02:173,6,0	1/1:5,27:34:45.15:2234,45,0	1/1:2,14:17:33.11:1873,33,0	./.	0/1:4,0:10:25.44:25,0,48	1/1:17,0:18:48.15:1233,48,0	1/1:3,9:15:6.49:210,6,0	1/1:1,10:14:2.83:122,3,0	0/0:15,0:15:45.15:0,45,1242	0/0:15,0:15:35.92:0,36,1146	0/0:32,0:32:45.36:0,45,2762	0/0:11,0:11:33.11:0,33,1151	1/1:4,14:20:48.16:2046,48,0	1/1:3,11:16:18.06:1028,18,0	1/1:2,2:7:12.04:469,12,0
chr10	85440883	.	GGA	G	96.99	PASS	AB=0.878;AC=6;AF=0.136;AN=44;BaseQRankSum=1.493;DP=434;FS=2.294;HRun=0;HaplotypeScore=140.2690;InbreedingCoeff=0.0099;MQ=70.80;MQ0=3;MQRankSum=1.006;QD=1.04;ReadPosRankSum=1.951;VQSLOD=2.6140;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:35,0:24:27.06:0,27,362	0/0:53,0:37:2.11:0,2,319	0/1:16,2:18:11.85:12,0,310	0/1:12,1:12:5.67:6,0,400	./.	0/0:34,0:29:35.39:0,35,385	0/0:17,1:18:0.35:0,0,484	./.	./.	0/0:16,0:22:6.43:0,6,66	0/0:9,0:14:17.97:0,18,162	0/0:7,0:13:9.73:0,10,67	1/1:21,0:22:3.63:11,4,0	0/0:16,0:17:11.09:0,11,105	./.	0/0:12,0:11:11.96:0,12,118	0/0:16,0:15:26.81:0,27,294	0/0:12,0:12:6.84:0,7,45	0/0:10,0:9:3.01:0,3,39	0/0:13,0:12:5.43:0,5,400	0/1:11,2:12:14.69:15,0,237	0/1:21,6:26:99:157,0,538	0/0:12,0:12:33.11:0,33,523	0/0:22,0:28:53.95:0,54,548	0/0:19,0:21:17.36:0,17,160	0/0:10,0:10:9.70:0,10,133
chr10	85441087	.	AAAG	A	303.97	PASS	AB=0.967;AC=16;AF=0.286;AN=56;BaseQRankSum=9.178;DP=449;FS=22.819;HRun=0;HaplotypeScore=79.7228;InbreedingCoeff=-0.2779;MQ=63.22;MQ0=9;MQRankSum=-5.734;QD=1.50;ReadPosRankSum=8.329;VQSLOD=-0.6148;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:24,1:25:27.11:27,0,140	0/1:8,1:8:33.79:42,0,34	0/0:31,0:15:28.95:0,29,337	0/0:14,0:8:5.33:0,5,146	0/0:25,0:24:50.90:0,51,608	0/0:19,0:18:32.82:0,33,340	0/1:12,0:11:7.99:8,0,90	0/0:16,0:16:12.34:0,12,199	0/0:16,0:16:30.07:0,30,325	0/0:15,0:15:5.39:0,5,89	0/1:15,0:15:7.93:8,0,75	0/1:17,1:17:59.55:60,0,150	0/1:13,0:13:22.07:56,0,22	0/1:8,1:9:42.75:43,0,60	0/0:15,0:15:0.54:0,1,191	0/1:9,0:9:29.43:33,0,29	0/1:22,1:21:36.49:36,0,72	0/1:12,1:12:40.84:52,0,41	0/1:16,1:17:37.66:38,0,156	0/1:12,0:11:5.40:5,0,101	1/1:7,0:7:4.35:23,4,0	0/0:12,0:12:23.84:0,24,241	0/0:16,0:15:41.51:0,42,589	0/0:15,0:14:32.55:0,33,359	0/0:28,0:27:68.48:0,68,762	0/0:23,0:22:0.17:0,0,204	0/1:12,0:11:4.23:4,0,122	0/1:9,0:7:10.87:18,0,11
chr10	85441401	.	G	GC	14983.47	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-15.502;DP=616;FS=5.137;HRun=0;HaplotypeScore=60.2677;InbreedingCoeff=0.9998;MQ=97.50;MQ0=0;MQRankSum=-6.578;QD=41.97;ReadPosRankSum=3.241;VQSLOD=5.5878;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:78.27:1246,78,0	1/1:1,12:13:33.11:519,33,0	0/0:45,0:45:99:0,122,1589	0/0:23,0:22:57.15:0,57,763	0/0:16,0:16:45.15:0,45,622	0/0:15,0:15:45.15:0,45,629	1/1:1,29:30:78.27:1247,78,0	1/1:0,17:17:51.14:767,51,0	0/0:20,0:20:60.20:0,60,839	1/1:1,16:17:48.16:765,48,0	1/1:1,14:15:42.14:666,42,0	0/0:23,0:23:66.19:0,66,896	0/0:21,0:21:60.20:0,60,837	0/0:29,0:29:87.29:0,87,1215	1/1:0,25:25:66.23:1055,66,0	1/1:1,24:25:63.21:1007,63,0	1/1:1,38:39:99:1727,108,0	1/1:0,11:11:30.10:480,30,0	1/1:1,19:21:60.10:872,60,0	1/1:0,22:22:54.18:861,54,0	1/1:2,31:33:78.27:1247,78,0	0/0:13,0:13:36.12:0,36,502	0/0:14,0:14:42.14:0,42,583	0/0:28,0:28:84.28:0,84,1175	0/0:12,0:12:36.12:0,36,503	1/1:2,26:28:78.23:1193,78,0	1/1:2,13:14:39.13:612,39,0	1/1:0,18:18:45.15:719,45,0
chr10	85442213	.	T	TAA	4237.97	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=2.001;DP=574;FS=0.000;HRun=10;HaplotypeScore=93.5028;InbreedingCoeff=0.9305;MQ=69.51;MQ0=1;MQRankSum=-0.223;QD=28.44;ReadPosRankSum=-2.297;VQSLOD=4.4563;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,31:41:80.69:1117,81,0	1/1:0,8:11:20.27:277,20,0	0/0:19,0:14:0.38:0,0,73	0/0:11,0:7:8.64:0,9,55	0/0:30,0:31:77.87:0,78,775	0/0:19,0:21:56.79:0,57,543	1/1:7,7:18:40.40:426,40,0	0/0:29,0:29:69.10:0,69,688	0/0:19,0:19:48.04:0,48,467	1/1:1,15:18:50.62:682,51,0	1/1:5,12:19:8.06:439,8,0	0/0:17,0:17:45.07:0,45,451	0/0:14,0:14:30.03:0,30,305	0/0:17,0:17:36.05:0,36,366	0/0:14,0:14:39.09:0,39,397	0/0:18,0:18:51.11:0,51,519	1/1:3,18:23:48.16:698,48,0	1/1:3,16:19:42.09:600,42,0	0/0:24,0:24:47.48:0,47,505	0/0:24,0:24:48.04:0,48,482	0/0:12,0:12:36.08:0,36,365	0/0:17,0:18:41.82:0,42,479	0/0:27,0:27:72.11:0,72,724	0/0:18,0:18:45.06:0,45,448	0/0:16,0:16:45.10:0,45,458	0/0:27,0:28:68.84:0,69,683	0/0:32,0:32:75.12:0,75,755	0/0:16,0:16:42.09:0,42,427
chr10	85442922	.	CA	C	4531.98	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=7.551;DP=619;FS=0.000;HRun=10;HaplotypeScore=101.7185;InbreedingCoeff=0.8868;MQ=74.02;MQ0=0;MQRankSum=0.142;QD=19.79;ReadPosRankSum=-0.874;VQSLOD=4.5161;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:33:55.16:0,55,837	0/0:10,0:11:26.91:0,27,280	0/0:18,0:17:14.50:0,14,189	0/0:8,0:9:2.31:0,2,47	0/1:20,0:21:1.04:1,0,428	0/0:29,0:29:84.23:0,84,929	0/0:27,0:28:78:0,78,830	1/1:5,26:31:77.94:669,78,0	0/0:23,1:24:38.33:0,38,624	0/0:24,1:25:34.11:0,34,605	0/0:18,2:20:5.13:0,5,512	0/0:22,0:22:54.13:0,54,582	0/0:21,0:21:60.15:0,60,654	0/0:16,0:16:36.04:0,36,376	1/1:5,24:30:65.02:553,65,0	1/1:1,26:27:74.98:651,75,0	0/0:18,1:18:22.09:0,22,472	0/0:13,1:14:13.05:0,13,372	1/1:3,18:21:53.95:464,54,0	1/1:5,23:28:68.98:599,69,0	1/1:2,6:8:17.99:156,18,0	0/0:31,1:32:52.15:0,52,803	0/0:33,0:33:87.23:0,87,957	0/0:13,1:14:7.03:0,7,306	0/0:22,0:22:48.13:0,48,531	1/1:2,20:23:62.01:523,62,0	1/1:3,23:27:67.80:578,68,0	1/1:0,13:13:38.99:339,39,0
chr10	85443573	.	C	CAAA	8418.07	PASS	AB=0.585;AC=35;AF=0.625;AN=56;BaseQRankSum=7.964;DP=538;FS=12.543;HRun=11;HaplotypeScore=114.7648;InbreedingCoeff=0.7717;MQ=56.34;MQ0=5;MQRankSum=-8.318;QD=23.13;ReadPosRankSum=-3.209;VQSLOD=1.5089;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,7:19:28.46:421,28,0	1/1:4,4:9:18.06:291,18,0	0/0:11,0:8:15.49:0,15,170	0/0:16,0:15:28.74:0,29,339	0/0:19,0:22:31.09:0,31,556	0/0:24,0:24:51.09:0,51,596	1/1:9,7:15:27.54:437,28,0	1/1:11,7:23:42.02:594,42,0	0/0:21,0:22:54.03:0,54,614	1/1:16,9:28:51.14:845,51,0	1/1:11,5:18:30.06:431,30,0	0/1:5,0:16:7.34:7,0,53	0/1:4,0:21:8.52:9,0,18	0/1:6,0:22:8.83:9,0,51	1/1:8,10:19:33.09:566,33,0	1/1:5,12:20:39.09:633,39,0	1/1:10,13:26:37.82:622,38,0	1/1:4,10:19:29.86:464,30,0	1/1:8,11:19:37.37:598,37,0	1/1:5,14:20:42.14:710,42,0	1/1:2,1:3:3.01:56,3,0	0/0:28,0:27:65.86:0,66,761	0/0:19,0:19:45.09:0,45,526	0/0:13,0:13:27.52:0,28,316	0/0:19,0:18:45.10:0,45,525	1/1:8,15:25:52.36:839,52,0	1/1:9,14:23:39.09:662,39,0	1/1:2,7:9:12.04:225,12,0
chr10	85444094	.	T	TAC	3902.33	PASS	AB=0.740;AC=23;AF=0.442;AN=52;BaseQRankSum=-1.702;DP=619;FS=4.832;HRun=0;HaplotypeScore=127.9505;InbreedingCoeff=0.5982;MQ=56.07;MQ0=6;MQRankSum=2.054;QD=12.19;ReadPosRankSum=-3.064;VQSLOD=2.8161;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,19:41:37.56:337,0,38	0/1:3,3:6:27.79:40,0,28	./.	./.	0/0:21,0:24:41.78:0,42,428	0/0:21,0:20:39.11:0,39,438	0/1:11,7:21:2.83:240,0,3	0/1:21,0:20:27.70:28,0,33	0/0:17,0:19:35.57:0,36,326	1/1:6,13:21:7.09:511,7,0	1/1:11,10:24:24.07:346,24,0	0/0:24,0:24:19.89:0,20,98	0/0:20,0:20:22.73:0,23,111	0/0:18,0:19:19.89:0,20,98	1/1:27,0:27:30.16:427,30,0	1/1:20,0:20:7.41:213,7,0	0/1:12,13:27:76.99:414,0,77	1/1:4,13:17:20.76:321,21,0	1/1:17,0:16:27.35:234,27,0	1/1:14,0:14:18.20:145,18,0	1/1:38,0:37:29.30:296,29,0	0/0:21,0:22:29.92:0,30,319	0/0:17,0:18:32.92:0,33,351	0/0:33,0:33:64.42:0,64,712	0/0:19,0:20:41.95:0,42,455	0/0:28,1:29:8.93:0,9,203	1/1:26,0:26:31.65:352,32,0	0/0:13,0:13:17.49:0,17,135
chr10	85444110	.	CACACACACACACACAT	C	3058.09	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.950;DP=649;FS=4.766;HRun=0;HaplotypeScore=263.3901;InbreedingCoeff=0.9034;MQ=54.30;MQ0=9;MQRankSum=-7.946;QD=53.65;ReadPosRankSum=2.506;VQSLOD=3.0803;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:74.95:0,75,3745	0/0:4,0:4:6.02:0,6,411	0/0:17,0:3:9.03:0,9,269	0/0:17,0:4:5.23:0,5,69	0/0:20,0:20:47.97:0,48,3322	0/0:23,0:22:54.19:0,54,3535	0/0:23,0:23:43.77:0,44,1699	0/0:28,0:27:23.93:0,24,1690	0/0:20,0:20:47.91:0,48,2577	0/0:25,0:25:67.11:0,67,4243	0/0:23,0:23:39.13:0,39,2398	1/1:3,15:18:24.08:1026,24,0	1/1:4,15:19:26.49:1147,26,0	1/1:7,13:20:24.08:1026,24,0	0/0:27,0:27:51.17:0,51,2412	0/0:22,0:22:32.58:0,33,1532	0/0:28,0:28:69.24:0,69,4259	0/0:18,0:18:36.10:0,36,2039	0/0:28,0:24:42.45:0,42,2074	0/0:15,0:15:30.90:0,31,1338	0/0:45,0:44:39.09:0,39,1562	0/0:20,0:20:45.11:0,45,2241	0/0:20,0:20:54.19:0,54,3308	0/0:31,0:31:78.24:0,78,5195	0/0:17,0:17:51.18:0,51,3713	0/0:30,0:30:66.22:0,66,2641	0/0:26,0:26:47.17:0,47,2273	0/0:17,0:17:39.13:0,39,1646
chr10	85444126	.	TAC	T	3488.80	PASS	AB=0.897;AC=23;AF=0.411;AN=56;BaseQRankSum=11.796;DP=644;FS=8.282;HRun=0;HaplotypeScore=129.6920;InbreedingCoeff=0.8987;MQ=56.66;MQ0=7;MQRankSum=-6.160;QD=11.83;ReadPosRankSum=2.724;VQSLOD=3.2801;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:90.71:0,91,1328	0/0:5,0:5:6.02:0,6,98	0/0:16,0:11:33.11:0,33,540	0/0:13,0:7:5.46:0,5,68	0/0:25,0:25:65.83:0,66,981	0/0:23,0:22:57.18:0,57,906	0/0:21,0:21:39.06:0,39,556	1/1:10,26:35:67.74:864,68,0	0/0:19,0:19:43.05:0,43,655	0/0:28,0:28:81.11:0,81,1229	0/0:18,0:18:39.13:0,39,631	1/1:15,0:15:19.59:94,20,0	1/1:15,0:15:22.19:107,22,0	1/1:13,0:14:19.04:92,19,0	1/1:23,5:28:29.01:124,29,0	1/1:18,3:21:10.45:138,10,0	0/0:32,0:32:76.75:0,77,1260	0/0:18,0:18:39.11:0,39,590	1/1:24,11:32:58.41:491,58,0	1/1:14,5:19:26.29:206,26,0	1/1:39,4:42:17.26:86,17,0	0/0:18,0:18:33:0,33,499	0/0:20,0:20:50.14:0,50,793	0/0:28,0:28:66.15:0,66,992	0/0:20,0:20:57.11:0,57,882	1/1:2,24:26:54.55:844,55,0	0/1:23,3:26:6.69:90,0,7	1/1:3,12:17:30.03:353,30,0
chr10	85444128	.	C	CAT	3510.59	PASS	AB=0.942;AC=13;AF=0.232;AN=56;BaseQRankSum=9.372;DP=643;FS=15.575;HRun=0;HaplotypeScore=132.2264;InbreedingCoeff=0.7104;MQ=57.06;MQ0=6;MQRankSum=-2.562;QD=14.94;ReadPosRankSum=0.405;VQSLOD=2.7694;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:95.93:0,96,1203	0/0:5,0:5:9.01:0,9,98	0/0:16,0:11:33.11:0,33,501	0/0:12,0:7:5.96:0,6,75	0/0:25,0:25:69.08:0,69,1002	0/0:22,0:21:60.17:0,60,866	0/0:20,0:20:38.72:0,39,435	0/1:35,0:35:35.18:355,0,35	0/0:20,0:20:51.14:0,51,733	0/0:29,0:29:80.89:0,81,1001	0/0:18,0:18:34.95:0,35,370	0/0:16,0:16:26.06:0,26,146	0/0:15,0:15:25.94:0,26,136	0/0:14,0:14:23.08:0,23,122	1/1:7,22:31:45.01:780,45,0	1/1:6,16:22:32.30:438,32,0	0/0:32,0:32:83.34:0,83,1048	0/0:18,0:18:38.58:0,39,453	0/1:26,7:30:1.96:524,0,2	1/1:14,5:19:31.48:373,31,0	1/1:16,25:41:12.45:340,12,0	0/0:17,0:17:39.11:0,39,553	0/0:20,0:20:57.18:0,57,848	0/0:28,0:28:75.14:0,75,993	0/0:20,0:20:57.18:0,57,848	0/1:26,0:26:87.88:88,0,129	1/1:7,19:27:42.86:612,43,0	0/0:16,0:16:34.06:0,34,175
chr10	85444130	.	C	CATAT	5546.66	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=4.613;DP=652;FS=21.260;HRun=0;HaplotypeScore=149.6393;InbreedingCoeff=0.8920;MQ=60.19;MQ0=6;MQRankSum=-3.551;QD=23.60;ReadPosRankSum=-0.133;VQSLOD=2.7106;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:99:0,99,1839	0/0:5,0:5:9.03:0,9,169	0/0:21,0:16:42.14:0,42,782	0/0:12,0:7:11.75:0,12,119	0/0:26,0:26:69.24:0,69,1353	0/0:22,0:21:60.19:0,60,1149	0/0:22,0:22:41.80:0,42,757	1/1:38,0:38:23.65:1073,24,0	0/0:21,0:21:54.15:0,54,995	0/0:30,0:30:84.24:0,84,1578	0/0:18,0:18:38.20:0,38,709	0/0:17,0:17:27.06:0,27,293	0/0:15,0:15:27.06:0,27,274	0/0:15,0:15:24.05:0,24,245	1/1:31,0:31:48.15:837,48,0	1/1:20,1:21:33.11:588,33,0	0/0:31,0:31:84.29:0,84,1645	0/0:17,0:17:39.13:0,39,766	1/1:34,1:32:57.34:1092,57,0	1/1:18,0:18:30.96:503,31,0	1/1:39,0:38:23.98:379,24,0	0/0:16,0:16:39.11:0,39,709	0/0:20,0:20:57.20:0,57,1125	0/0:27,0:27:75.24:0,75,1382	0/0:20,0:20:57.20:0,57,1128	0/1:27,0:27:31.75:317,0,32	1/1:24,2:26:43.29:758,43,0	0/0:17,0:17:24.32:0,24,92
chr10	85444442	.	T	TA	3891.41	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=0.709;DP=589;FS=7.002;HRun=8;HaplotypeScore=111.3223;InbreedingCoeff=0.9479;MQ=77.20;MQ0=0;MQRankSum=-3.141;QD=26.47;ReadPosRankSum=0.835;VQSLOD=3.0160;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,17:22:50.32:544,50,0	1/1:1,7:8:18.05:208,18,0	0/0:21,0:19:11.71:0,12,56	0/0:15,0:11:1.99:0,2,97	0/0:20,0:20:60.03:0,60,549	0/0:22,0:22:66.02:0,66,600	1/1:3,11:14:36.08:402,36,0	0/0:32,0:32:81.02:0,81,736	0/0:16,0:16:33:0,33,302	1/1:6,27:33:81.20:912,81,0	1/1:7,20:27:57.16:648,57,0	0/0:17,0:17:41.97:0,42,374	0/0:22,0:22:9.87:0,10,291	0/0:20,0:20:38.23:0,38,331	0/0:15,0:15:41.98:0,42,370	0/0:21,0:22:59.05:0,59,523	1/1:6,16:22:48.14:554,48,0	1/1:4,17:21:54.16:623,54,0	0/0:27,0:27:65.99:0,66,596	0/0:19,0:19:53.97:0,54,478	0/0:20,0:20:45.02:0,45,412	0/0:17,0:17:48.02:0,48,439	0/0:30,0:30:75.03:0,75,686	0/0:20,0:20:47.97:0,48,431	0/0:22,0:23:68.05:0,68,604	0/0:25,0:25:60.02:0,60,549	0/0:20,0:18:48.02:0,48,439	0/0:17,0:17:45.02:0,45,412
chr10	85444453	.	CT	C	4203.14	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-0.736;DP=582;FS=5.386;HRun=10;HaplotypeScore=113.2409;InbreedingCoeff=0.9336;MQ=70.49;MQ0=0;MQRankSum=1.478;QD=21.34;ReadPosRankSum=-1.405;VQSLOD=2.7651;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:23:50.72:0,51,250	0/0:3,0:10:22.63:0,23,119	0/0:15,0:12:1.57:0,2,156	0/0:12,0:9:4.05:0,4,63	0/0:25,0:25:60.16:0,60,661	0/0:22,0:22:60.16:0,60,663	0/0:3,0:15:28.15:0,28,135	1/1:7,26:33:77.91:667,78,0	0/0:20,0:20:8.29:0,8,501	0/0:6,0:33:75.84:0,76,377	0/0:6,0:22:45.08:0,45,218	0/0:0,0:15:36.37:0,36,171	0/0:0,0:18:44.05:0,44,203	0/0:0,0:17:36.37:0,36,171	1/1:5,11:16:32.98:286,33,0	1/1:2,21:23:62.97:547,63,0	0/0:4,0:21:47.69:0,48,226	0/0:7,0:20:39.36:0,39,194	1/1:8,17:25:50.97:440,51,0	1/1:3,18:21:53.98:469,54,0	1/1:1,22:23:53.99:469,54,0	0/0:20,0:20:51.13:0,51,556	0/0:27,0:28:75.04:0,75,810	0/0:18,0:18:48.13:0,48,531	0/0:28,0:28:81.19:0,81,882	1/1:1,20:22:49.27:497,49,0	1/1:3,14:17:44.97:387,45,0	1/1:0,17:17:50.99:443,51,0
chr10	85445357	.	A	AG	2956.73	PASS	AB=1.000;AC=18;AF=0.429;AN=42;BaseQRankSum=7.050;DP=346;FS=1.577;HRun=8;HaplotypeScore=61.1300;InbreedingCoeff=0.8455;MQ=81.24;MQ0=1;MQRankSum=-0.669;QD=19.45;ReadPosRankSum=1.476;VQSLOD=3.6992;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,16:20:39.12:450,39,0	1/1:0,6:6:12.04:139,12,0	0/0:16,0:15:24.88:0,25,219	0/1:18,0:15:6.99:7,0,117	0/0:12,0:12:15:0,15,137	0/0:18,0:18:39:0,39,356	1/1:3,26:29:66.20:762,66,0	./.	0/0:16,0:16:32.96:0,33,294	1/1:2,10:12:27.52:298,28,0	1/1:2,5:7:15.04:173,15,0	0/0:23,0:23:54.03:0,54,494	0/0:19,0:19:46.58:0,47,415	0/0:16,0:16:48.03:0,48,439	1/1:4,0:4:4.24:27,4,0	./.	1/1:10,30:40:48.06:1054,48,0	1/1:4,7:11:20.80:220,21,0	./.	./.	0/1:5,0:5:0:0,0,0	0/0:19,0:19:50.62:0,51,449	0/0:13,0:13:29.99:0,30,274	0/0:25,0:25:57.02:0,57,522	0/0:14,0:14:27.48:0,27,248	./.	./.	./.
chr10	85445728	.	CAA	C	7275.36	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=4.639;DP=563;FS=7.539;HRun=12;HaplotypeScore=79.4413;InbreedingCoeff=0.9943;MQ=73.56;MQ0=0;MQRankSum=-0.682;QD=21.72;ReadPosRankSum=4.785;VQSLOD=4.2291;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:36:92.68:909,93,0	1/1:1,8:9:13.05:203,13,0	0/0:24,0:17:26.31:0,26,311	0/0:10,0:10:18.52:0,19,206	0/0:32,0:36:91.54:0,92,1233	0/0:16,0:19:45.07:0,45,604	1/1:1,10:11:27.05:275,27,0	1/1:5,23:28:69.06:671,69,0	0/0:14,0:14:37.30:0,37,471	1/1:5,20:25:57.06:579,57,0	1/1:2,20:22:48.04:488,48,0	0/0:16,0:18:50.53:0,51,602	0/0:14,0:14:41.81:0,42,513	0/0:11,0:12:35.60:0,36,484	1/1:2,13:15:27.06:275,27,0	1/1:3,9:13:23.78:225,24,0	1/1:6,35:42:92.89:927,93,0	1/1:2,0:20:35.67:154,36,0	1/1:7,13:20:39.05:391,39,0	1/1:1,12:13:30.02:304,30,0	1/1:2,16:18:33.07:336,33,0	0/0:22,0:23:62.64:0,63,769	0/0:16,0:20:47.63:0,48,637	0/0:20,0:20:51.17:0,51,760	0/0:17,0:18:53.62:0,54,681	1/1:3,18:22:34.18:535,34,0	1/1:2,29:31:74.94:760,75,0	1/1:0,10:10:24.05:244,24,0
chr10	85447139	.	TTAA	T	1889.13	PASS	AB=0.750;AC=32;AF=0.593;AN=54;BaseQRankSum=3.349;DP=288;FS=5.463;HRun=0;HaplotypeScore=36.7066;InbreedingCoeff=0.6041;MQ=54.45;MQ0=61;MQRankSum=-3.088;QD=9.74;ReadPosRankSum=-0.290;VQSLOD=1.9770;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:10:11.86:108,12,0	0/1:0,0:5:1.37:25,0,1	0/0:44,0:5:11.48:0,11,84	0/1:38,0:8:9.67:10,0,69	0/0:15,0:13:26.86:0,27,346	0/0:9,0:9:18.06:0,18,312	1/1:9,0:8:23.55:144,24,0	1/1:5,16:19:38.01:332,38,0	0/0:5,0:5:9.03:0,9,167	1/1:3,0:12:4.18:168,4,0	1/1:0,0:7:10.74:98,11,0	0/0:5,0:5:3.94:0,4,35	0/0:1,0:1:3:0,3,27	0/0:3,0:3:5.93:0,6,40	1/1:9,2:9:17.64:135,18,0	1/1:5,0:3:2.94:18,3,0	1/1:2,0:4:6.02:71,6,0	1/1:7,0:8:4.83:115,5,0	1/1:5,9:9:26.95:253,27,0	1/1:1,5:6:3.01:50,3,0	1/1:3,1:4:8.96:103,9,0	./.	0/0:1,0:1:2.99:0,3,23	0/0:4,0:4:6.02:0,6,101	0/0:7,0:6:11.95:0,12,137	1/1:1,11:11:23.84:228,24,0	1/1:1,12:14:5.94:163,6,0	1/1:6,1:2:5.81:53,6,0
chr10	85447602	.	G	GTTT	7409.45	PASS	AB=0.532;AC=31;AF=0.554;AN=56;BaseQRankSum=1.289;DP=537;FS=0.448;HRun=8;HaplotypeScore=88.9530;InbreedingCoeff=0.9275;MQ=82.36;MQ0=1;MQRankSum=-2.581;QD=24.14;ReadPosRankSum=-0.500;VQSLOD=2.5689;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:33:5.94:49,0,6	1/1:0,0:8:9.61:20,10,0	0/0:20,0:20:43:0,43,546	0/0:12,0:13:27.07:0,27,337	0/0:34,0:34:70.65:0,71,911	0/0:16,0:16:42.13:0,42,552	1/1:3,0:18:16.67:36,17,0	1/1:8,13:24:54.14:952,54,0	0/0:19,0:19:54.15:0,54,694	1/1:4,0:24:21.93:50,22,0	1/1:0,0:18:23.37:64,23,0	0/0:11,0:11:27.07:0,27,354	0/0:14,0:14:39.13:0,39,513	0/0:20,0:21:55.75:0,56,744	1/1:5,14:22:45.03:737,45,0	1/1:1,5:6:15.02:263,15,0	1/1:3,0:25:26.16:57,26,0	1/1:5,0:19:14.59:32,15,0	1/1:4,19:23:60.19:1134,60,0	1/1:3,11:15:36.10:647,36,0	1/1:3,19:24:60.16:1116,60,0	0/0:30,0:30:87.27:0,87,1128	0/0:15,0:15:33.07:0,33,404	0/0:23,0:23:63.20:0,63,828	0/0:14,0:14:33.09:0,33,434	1/1:3,14:19:54.16:994,54,0	1/1:2,15:17:42.12:792,42,0	1/1:1,8:10:24.08:467,24,0
chr10	85447844	.	ATG	A	1162.83	PASS	AB=0.934;AC=27;AF=0.519;AN=52;BaseQRankSum=6.507;DP=711;FS=5.465;HRun=0;HaplotypeScore=107.6299;InbreedingCoeff=-0.0002;MQ=59.01;MQ0=15;MQRankSum=-1.249;QD=2.33;ReadPosRankSum=2.156;VQSLOD=1.4778;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,3:41:11.59:12,0,168	0/0:7,0:7:3.01:0,3,33	./.	./.	0/1:29,1:30:43.15:43,0,295	0/0:21,0:21:6.58:0,7,306	0/0:16,0:28:11.03:0,11,83	0/0:23,0:21:0:0,0,0	0/1:22,1:23:16.15:16,0,253	0/1:29,0:29:34.60:35,0,252	0/0:17,0:17:5.89:0,6,109	1/1:13,0:16:3.82:46,4,0	1/1:14,0:20:5.59:26,6,0	1/1:15,0:25:7.67:40,8,0	1/1:14,0:17:5.71:46,6,0	1/1:9,8:17:11.86:111,12,0	0/1:42,3:45:94.23:94,0,313	0/0:12,0:10:8.81:0,9,80	0/1:19,1:17:2.15:28,0,2	1/1:5,9:14:20.63:164,21,0	0/1:40,8:44:15.11:20,0,15	0/0:35,0:35:10.33:0,10,521	0/1:24,1:25:77.60:78,0,316	0/1:32,1:33:39.91:40,0,437	0/1:21,0:21:25.16:25,0,160	0/1:22,11:34:15.90:317,0,16	1/1:14,10:24:8.64:70,9,0	1/1:7,6:13:11.87:111,12,0
chr10	85448318	.	GGTGT	G	2815.62	PASS	AB=0.759;AC=17;AF=0.304;AN=56;BaseQRankSum=2.500;DP=722;FS=2.282;HRun=0;HaplotypeScore=167.9527;InbreedingCoeff=0.4073;MQ=67.11;MQ0=16;MQRankSum=-5.703;QD=10.75;ReadPosRankSum=1.482;VQSLOD=3.4084;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:45:20.98:0,21,319	0/0:7,0:10:3.01:0,3,37	0/0:39,0:22:6.01:0,6,81	0/0:44,0:29:6.02:0,6,100	0/1:18,1:22:21.48:21,0,331	0/1:18,1:22:12.20:12,0,595	0/0:12,0:32:5.85:0,6,95	0/1:25,6:30:3.60:152,0,4	0/0:19,0:18:30.10:0,30,666	0/0:18,0:25:33.47:0,33,409	0/0:6,0:15:11.94:0,12,100	0/0:14,0:27:17.66:0,18,244	0/0:9,0:21:14.11:0,14,184	0/0:7,0:18:12.04:0,12,207	1/1:7,9:16:21.07:336,21,0	1/1:7,14:24:45.10:624,45,0	0/0:25,0:43:57.61:0,58,1164	0/0:24,0:25:36.01:0,36,505	1/1:9,6:15:15:188,15,0	1/1:6,9:16:24.03:336,24,0	0/1:14,14:30:0.50:132,0,0	0/0:19,0:18:26.76:0,27,563	0/0:30,0:34:45.36:0,45,927	0/0:37,0:42:61.29:0,61,1491	0/1:19,2:22:15.19:15,0,537	0/1:14,11:25:19.22:495,0,19	0/1:13,16:32:4.99:635,0,5	1/1:2,1:3:3.01:48,3,0
chr10	85449141	.	TG	T	3672.81	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=10.518;DP=591;FS=15.189;HRun=4;HaplotypeScore=109.1595;InbreedingCoeff=0.9785;MQ=74.63;MQ0=13;MQRankSum=-1.581;QD=11.89;ReadPosRankSum=2.035;VQSLOD=1.2928;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,2:32:77.55:376,78,0	1/1:7,0:7:19.40:108,19,0	0/0:64,0:28:69.93:0,70,669	0/0:57,0:29:15.42:0,15,341	0/0:24,0:23:69.09:0,69,873	0/0:12,0:12:33.08:0,33,426	1/1:12,3:14:19.69:123,20,0	1/1:30,3:33:75.55:457,76,0	0/0:13,0:13:39.12:0,39,528	1/1:16,2:18:48.01:287,48,0	1/1:26,0:27:53.11:259,53,0	0/0:14,0:14:39.05:0,39,483	0/0:12,0:12:30.09:0,30,401	0/0:11,0:11:30.10:0,30,419	1/1:16,0:16:36.48:179,36,0	1/1:19,0:19:41.78:202,42,0	1/1:25,2:27:72.62:370,73,0	1/1:11,1:12:30.78:172,31,0	1/1:20,0:19:51.60:294,52,0	1/1:25,0:25:34.12:241,34,0	1/1:4,0:4:5.37:23,5,0	0/0:21,0:21:63.15:0,63,807	0/0:12,0:12:33.07:0,33,409	0/0:21,0:21:57.17:0,57,777	0/0:20,0:20:60.15:0,60,785	1/1:24,0:24:40.93:299,41,0	1/1:22,0:22:22.72:197,23,0	1/1:8,0:7:19.22:87,19,0
chr10	85449144	.	G	GT	5163.14	PASS	AB=0.632;AC=31;AF=0.554;AN=56;BaseQRankSum=11.030;DP=588;FS=9.788;HRun=0;HaplotypeScore=101.8909;InbreedingCoeff=0.8943;MQ=73.02;MQ0=14;MQRankSum=-1.559;QD=16.76;ReadPosRankSum=5.281;VQSLOD=6.6184;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:30:64:296,64,0	1/1:2,0:7:12.24:80,12,0	0/0:64,0:27:64.60:0,65,779	0/0:56,0:27:27.36:0,27,408	0/0:26,0:25:75.22:0,75,1005	0/0:11,0:11:33.11:0,33,456	1/1:7,0:12:2.89:23,3,0	1/1:11,21:32:40:795,40,0	0/0:13,0:13:39.13:0,39,544	1/1:4,0:18:26.89:160,27,0	1/1:4,1:28:35.86:246,36,0	0/0:14,0:14:42.13:0,42,566	0/0:11,0:11:33.10:0,33,440	0/0:11,0:11:33.10:0,33,446	1/1:2,15:17:34.88:398,35,0	1/1:2,18:21:41.09:444,41,0	1/1:8,2:27:58.83:287,59,0	1/1:2,1:13:26.84:124,27,0	1/1:2,17:19:48.86:507,49,0	1/1:3,20:23:46.02:623,46,0	1/1:1,3:4:5.55:64,6,0	0/0:21,0:21:63.20:0,63,864	0/0:12,0:12:33.08:0,33,424	0/0:21,0:21:57.19:0,57,796	0/0:20,0:20:59.93:0,60,806	0/1:10,14:24:7.13:433,0,7	1/1:6,16:22:32.78:472,33,0	1/1:2,5:7:20.73:212,21,0
chr10	85451358	.	GCACA	G	8320	PASS	AB=0.759;AC=30;AF=0.556;AN=54;BaseQRankSum=11.848;DP=839;FS=4.880;HRun=0;HaplotypeScore=184.1300;InbreedingCoeff=0.8224;MQ=55.29;MQ0=10;MQRankSum=1.069;QD=17.19;ReadPosRankSum=0.570;VQSLOD=4.5169;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:46:6.24:79,6,0	./.	0/0:52,0:17:24.08:0,24,468	0/0:61,0:21:24.07:0,24,507	0/0:26,0:28:56.73:0,57,1271	0/0:10,0:12:20.54:0,21,391	1/1:6,0:25:8.83:84,9,0	1/1:14,17:31:39.15:623,39,0	0/0:29,0:32:80.48:0,80,1693	1/1:8,0:31:67.50:602,68,0	1/1:3,1:27:19.86:195,20,0	0/0:33,0:36:92.50:0,93,1924	0/0:25,1:28:25.01:0,25,1480	0/0:31,0:33:77.89:0,78,1750	1/1:3,20:27:48.16:764,48,0	1/1:5,17:25:39.01:647,39,0	1/1:10,0:23:8.33:72,8,0	0/1:8,0:24:21.95:22,0,33	1/1:6,10:16:17.76:457,18,0	1/1:9,19:30:42.14:696,42,0	1/1:19,51:69:99:1610,101,0	0/0:17,0:21:59.39:0,59,1220	0/0:20,0:22:56.66:0,57,1242	0/1:31,2:34:9.45:9,0,1794	0/0:18,0:20:44.62:0,45,957	1/1:6,27:35:87.26:1310,87,0	1/1:10,19:31:48.15:752,48,0	1/1:0,9:9:24.08:398,24,0
chr10	85451859	.	CT	C	3173.28	PASS	AB=0.712;AC=35;AF=0.625;AN=56;BaseQRankSum=2.090;DP=435;FS=1.522;HRun=13;HaplotypeScore=58.6806;InbreedingCoeff=0.5454;MQ=76.76;MQ0=0;MQRankSum=-1.252;QD=10.54;ReadPosRankSum=2.978;VQSLOD=3.2118;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,25:32:70.62:509,71,0	1/1:0,3:3:8.95:66,9,0	0/0:15,0:11:9:0,9,105	0/0:21,0:18:15.24:0,15,152	0/0:24,0:24:32.99:0,33,305	0/0:19,1:20:26.15:0,26,407	0/1:5,10:16:23.47:168,0,23	1/1:15,11:28:13.56:243,14,0	0/1:14,2:19:9.74:10,0,219	1/1:3,8:12:22.74:152,23,0	0/1:5,5:11:12.24:76,0,12	1/1:6,8:14:28.32:190,28,0	1/1:5,4:9:16.73:104,17,0	1/1:7,2:9:11.84:85,12,0	1/1:6,4:10:14.64:99,15,0	1/1:7,14:21:6.56:211,7,0	1/1:3,13:20:40.80:264,41,0	0/1:7,3:10:10.42:104,0,10	1/1:6,7:15:24.90:165,25,0	1/1:6,7:13:16.98:130,17,0	0/1:5,5:11:30.73:70,0,31	0/0:6,0:6:11.94:0,12,105	0/0:16,0:16:33.02:0,33,307	0/0:14,0:15:30.82:0,31,274	0/0:14,0:16:27.19:0,27,234	1/1:9,16:26:6.29:363,6,0	1/1:0,12:13:34.85:247,35,0	1/1:1,6:9:1.45:120,1,0
chr10	85451901	.	A	AAC	3930.81	PASS	AB=0.861;AC=40;AF=0.769;AN=52;BaseQRankSum=0.728;DP=445;FS=0.000;HRun=0;HaplotypeScore=110.2287;InbreedingCoeff=0.1126;MQ=56.67;MQ0=2;MQRankSum=-1.746;QD=9.83;ReadPosRankSum=-0.647;VQSLOD=3.1944;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:30.37:279,30,0	1/1:3,0:6:9:78,9,0	./.	./.	0/1:6,1:7:20.80:104,0,21	0/1:18,0:18:13.70:14,0,175	1/1:11,1:15:21.01:202,21,0	1/1:16,0:16:3.92:22,4,0	0/0:9,0:11:17.71:0,18,152	1/1:16,0:19:21.32:187,21,0	1/1:10,0:11:8.84:76,9,0	1/1:14,0:12:6.01:69,6,0	1/1:13,1:17:27.36:215,27,0	1/1:8,0:11:3:26,3,0	1/1:7,0:11:23.83:239,24,0	1/1:17,0:21:35.26:311,35,0	1/1:22,0:22:23.67:180,24,0	0/1:8,1:15:6.33:185,0,6	0/1:14,3:18:41.80:207,0,42	1/1:12,7:19:25.06:395,25,0	1/1:18,1:20:9.72:222,10,0	0/0:5,0:5:6:0,6,57	1/1:6,5:11:9:135,9,0	0/1:14,9:24:45.69:201,0,46	0/1:10,0:11:1.55:2,0,98	0/1:20,0:20:8.33:209,0,8	0/1:13,3:17:56.32:227,0,56	1/1:10,0:14:14.81:148,15,0
chr10	85452504	.	A	AAC	1394.26	PASS	AB=0.844;AC=17;AF=0.327;AN=52;BaseQRankSum=-2.666;DP=581;FS=2.390;HRun=0;HaplotypeScore=100.4659;InbreedingCoeff=0.1378;MQ=67.19;MQ0=8;MQRankSum=0.598;QD=5.28;ReadPosRankSum=-2.154;VQSLOD=2.8328;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:27,10:39:68.42:156,0,68	1/1:5,1:6:6:67,6,0	./.	./.	0/0:19,0:19:13.58:0,14,135	0/0:19,0:20:14.86:0,15,145	1/1:11,4:18:6:72,6,0	0/0:22,0:20:2.46:0,2,27	0/0:19,0:23:41.38:0,41,392	0/1:23,0:24:3.34:82,0,3	0/1:9,2:11:21.01:114,0,21	0/0:15,0:17:11.52:0,12,82	0/0:14,0:14:11.90:0,12,122	0/0:14,0:18:23.90:0,24,244	0/0:12,0:18:22.68:0,23,110	0/0:8,0:15:17.04:0,17,84	0/1:22,3:24:14.37:201,0,14	0/0:28,0:31:35.42:0,35,327	1/1:14,0:14:6.02:80,6,0	1/1:8,5:12:6.02:90,6,0	0/1:28,15:45:14.95:206,0,15	0/0:17,0:20:23.83:0,24,222	0/1:18,1:19:30.47:30,0,176	0/0:35,0:36:32.66:0,33,321	0/0:7,0:9:14.50:0,14,106	0/1:16,0:15:18.25:90,0,18	0/1:14,3:19:31.58:118,0,32	0/1:4,10:15:11.30:249,0,11
chr10	85452643	.	ACTGC	A	1218.19	PASS	AB=0.559;AC=5;AF=0.089;AN=56;BaseQRankSum=9.781;DP=655;FS=4.166;HRun=0;HaplotypeScore=138.3939;InbreedingCoeff=0.7635;MQ=85.90;MQ0=0;MQRankSum=-6.935;QD=31.24;ReadPosRankSum=-2.074;VQSLOD=3.3260;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,150,3829	0/0:13,0:13:39.13:0,39,1090	0/0:21,0:21:63.21:0,63,1596	0/0:26,0:26:40.34:0,40,1795	0/0:20,0:20:60.21:0,60,1661	0/0:13,0:13:39.13:0,39,1128	0/0:23,0:23:69.24:0,69,1947	1/1:4,11:15:37.85:522,38,0	0/0:33,0:33:99:0,99,2825	0/0:29,0:29:87.24:0,87,2359	0/0:17,0:17:48.16:0,48,1326	0/0:18,0:18:54.17:0,54,1500	0/0:17,0:17:48.13:0,48,1243	0/0:22,0:22:66.23:0,66,1831	0/0:26,0:26:78.27:0,78,2221	0/0:16,0:16:48.16:0,48,1353	0/0:45,0:44:99:0,132,3634	0/0:27,0:27:78.27:0,78,2173	0/0:17,0:17:51.18:0,51,1477	0/0:29,0:29:84.29:0,84,2277	0/0:51,0:51:99:0,147,4056	0/0:31,0:31:87.30:0,87,2256	0/0:8,0:8:21.07:0,21,554	0/0:26,0:26:78.27:0,78,2212	0/0:14,0:14:42.14:0,42,1217	0/1:4,15:19:99:637,0,117	0/0:22,0:22:66.23:0,66,1880	1/1:0,4:4:12.04:186,12,0
chr10	85452648	.	AC	A	547.83	PASS	AB=0.545;AC=5;AF=0.089;AN=56;BaseQRankSum=9.404;DP=648;FS=4.187;HRun=1;HaplotypeScore=97.9744;InbreedingCoeff=0.7708;MQ=84.65;MQ0=0;MQRankSum=-8.076;QD=14.42;ReadPosRankSum=-1.663;VQSLOD=2.6784;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,151,2376	0/0:13,0:13:36.12:0,36,575	0/0:19,0:19:57.19:0,57,902	0/0:25,0:26:77.61:0,78,1151	0/0:19,0:19:57.19:0,57,910	0/0:14,0:14:42.14:0,42,671	0/0:24,0:24:69.24:0,69,1094	1/1:4,11:14:38.74:283,39,0	0/0:33,0:33:99:0,99,1557	0/0:27,0:28:83.31:0,83,1300	0/0:16,0:16:45.15:0,45,715	0/0:18,0:18:51.17:0,51,813	0/0:16,0:16:48.16:0,48,743	0/0:23,0:23:69.24:0,69,1102	0/0:26,0:26:78.27:0,78,1245	0/0:19,0:19:57.18:0,57,870	0/0:45,0:44:99:0,135,2132	0/0:26,0:26:75.25:0,75,1187	0/0:19,0:19:57.19:0,57,908	0/0:26,0:26:72.25:0,72,1150	0/0:48,0:48:99:0,144,2265	0/0:28,0:28:81.24:0,81,1260	0/0:8,0:8:21.07:0,21,335	0/0:28,0:28:81.23:0,81,1266	0/0:15,0:15:45.15:0,45,719	0/1:3,15:18:42.57:279,0,43	0/0:22,0:22:66.23:0,66,1051	1/1:1,4:5:14.94:114,15,0
chr10	85453426	.	AGATGGATG	A	4115.48	PASS	AB=0.780;AC=15;AF=0.268;AN=56;BaseQRankSum=10.563;DP=842;FS=5.475;HRun=0;HaplotypeScore=225.7312;InbreedingCoeff=0.8631;MQ=63.88;MQ0=4;MQRankSum=-10.572;QD=16.80;ReadPosRankSum=1.630;VQSLOD=2.5323;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,16:44:9.05:297,9,0	1/1:8,7:15:12.04:302,12,0	0/0:34,0:23:15:0,15,247	0/0:44,0:34:15.05:0,15,343	0/0:29,0:29:66.23:0,66,2536	0/0:31,0:31:60.19:0,60,2234	0/0:20,0:35:30:0,30,347	0/0:21,0:21:18.06:0,18,678	0/0:33,0:33:78.27:0,78,3181	1/1:19,15:32:44.71:938,45,0	1/1:5,20:26:14.61:377,15,0	0/0:9,0:31:53.94:0,54,480	0/0:16,0:27:35.73:0,36,331	0/0:15,0:37:62.14:0,62,535	1/1:10,0:40:63.22:1173,63,0	1/1:11,0:34:45.14:807,45,0	0/1:23,9:31:33.35:70,0,33	1/1:14,6:20:6.02:151,6,0	0/0:27,0:26:30.10:0,30,1202	0/0:32,0:32:60.19:0,60,2321	0/0:56,0:56:99:0,111,4244	0/0:19,0:19:40.95:0,41,1600	0/0:23,0:23:33.10:0,33,1261	0/0:29,0:29:63.21:0,63,2329	0/0:18,0:18:33.11:0,33,1354	0/0:22,0:22:57.19:0,57,1964	0/0:33,0:33:72.23:0,72,2550	0/0:15,0:15:33.06:0,33,1254
chr10	85453660	.	G	GAA	14309.38	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-12.360;DP=655;FS=17.867;HRun=8;HaplotypeScore=69.3029;InbreedingCoeff=0.9968;MQ=63.85;MQ0=4;MQRankSum=1.217;QD=34.40;ReadPosRankSum=-0.921;VQSLOD=3.2784;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:37:77.30:711,77,0	1/1:1,12:13:27.09:429,27,0	0/0:25,0:18:44.63:0,45,475	0/0:10,0:10:15.01:0,15,155	0/0:21,0:21:48.10:0,48,526	0/0:32,0:32:93.25:0,93,1036	1/1:1,16:17:45.15:714,45,0	1/1:3,19:22:57.18:870,57,0	0/0:15,0:15:45.11:0,45,491	1/1:1,29:31:87.29:1356,87,0	1/1:4,24:29:63.13:929,63,0	0/0:14,0:14:36.08:0,36,401	0/0:10,0:10:27.05:0,27,291	0/0:19,0:19:20.57:0,21,424	1/1:2,28:31:72.20:1115,72,0	1/1:4,16:20:36.09:545,36,0	1/1:2,23:27:62.70:961,63,0	1/1:2,21:23:54.18:857,54,0	1/1:4,21:26:69.17:979,69,0	1/1:4,31:36:96.07:1337,96,0	1/1:3,17:19:36.12:571,36,0	0/0:22,0:22:54.12:0,54,591	0/0:27,0:27:72.19:0,72,802	0/0:28,0:28:72.19:0,72,802	0/0:16,0:14:39.08:0,39,423	1/1:6,26:32:78.18:1192,78,0	1/1:6,27:33:69.23:1076,69,0	1/1:1,17:17:42.14:667,42,0
chr10	85455325	.	CAA	C	1320.62	PASS	AB=0.943;AC=8;AF=0.143;AN=56;BaseQRankSum=0.035;DP=693;FS=2.231;HRun=13;HaplotypeScore=105.1315;InbreedingCoeff=0.7112;MQ=68.20;MQ0=2;MQRankSum=-0.632;QD=12.12;ReadPosRankSum=3.314;VQSLOD=2.8060;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:40:35.58:0,36,326	0/0:3,0:11:8.08:0,8,88	0/1:16,0:14:9.07:9,0,138	0/1:15,1:12:5.08:5,0,193	0/0:25,0:28:70.63:0,71,830	0/0:24,0:27:52.56:0,53,580	0/0:11,0:23:11.98:0,12,112	0/0:26,1:29:23.56:0,24,536	0/0:28,0:34:81.35:0,81,836	0/0:18,0:40:67.46:0,67,618	0/0:12,0:17:41.89:0,42,339	1/1:7,31:39:77.79:737,78,0	1/1:6,12:21:31.52:418,32,0	1/1:2,13:16:32.78:301,33,0	0/0:10,0:29:36.08:0,36,412	0/0:9,0:19:24.02:0,24,233	0/0:3,0:26:15.64:0,16,163	0/0:8,0:27:15.02:0,15,146	0/0:12,1:15:12.45:0,12,413	0/0:13,1:20:23.47:0,23,543	0/0:25,0:29:64.56:0,65,704	0/0:15,0:18:44.09:0,44,516	0/0:17,0:23:56.58:0,57,667	0/0:29,0:29:71.23:0,71,921	0/0:28,0:31:74.21:0,74,982	0/0:24,0:26:26.88:0,27,572	0/0:18,0:22:58.59:0,59,686	0/0:15,0:20:54.17:0,54,578
chr10	85456337	.	AGAGGAAGAG	A	7755.60	PASS	AB=0.543;AC=13;AF=0.232;AN=56;BaseQRankSum=14.906;DP=637;FS=0.408;HRun=0;HaplotypeScore=200.1558;InbreedingCoeff=0.8959;MQ=87.10;MQ0=0;MQRankSum=-12.571;QD=64.10;ReadPosRankSum=-2.459;VQSLOD=4.3003;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,150,6608	0/0:11,0:11:30.10:0,30,1446	0/0:27,0:27:66.20:0,66,2679	0/0:28,0:28:60.37:0,60,1960	0/0:26,0:26:72.25:0,72,3235	0/0:27,0:27:78.27:0,78,3587	0/0:30,0:30:84.27:0,84,3687	1/1:5,23:26:63.15:1509,63,0	0/0:21,0:21:63.20:0,63,2866	0/0:28,0:28:78.26:0,78,3628	0/0:16,0:16:42.14:0,42,1808	0/0:28,0:28:81.26:0,81,3770	0/0:20,0:20:60.21:0,60,2830	0/0:20,0:20:54.19:0,54,2422	0/0:23,0:23:69.22:0,69,3176	0/0:17,0:17:42.14:0,42,1978	0/0:35,0:35:99:0,102,4560	0/0:17,0:17:51.18:0,51,2379	1/1:2,16:18:45.15:1304,45,0	1/1:3,19:22:59.95:1451,60,0	1/1:4,8:12:14.61:452,15,0	0/0:27,0:27:78.26:0,78,3573	0/0:23,0:23:60.14:0,60,2582	0/0:13,0:13:39.12:0,39,1704	0/0:25,0:25:75.26:0,75,3489	0/1:3,16:19:96.90:1313,0,97	1/1:1,11:12:30.10:908,30,0	1/1:0,10:10:27.09:818,27,0
chr10	85457407	.	C	CA	7902.90	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-15.491;DP=708;FS=0.640;HRun=2;HaplotypeScore=63.3700;InbreedingCoeff=0.9999;MQ=80.48;MQ0=0;MQRankSum=-2.341;QD=41.16;ReadPosRankSum=0.138;VQSLOD=4.8397;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1314	0/0:13,0:13:39.12:0,39,483	0/0:21,0:21:54.16:0,54,661	0/0:13,0:13:36.11:0,36,444	0/0:34,0:34:99:0,102,1250	0/0:18,0:18:45.13:0,45,545	0/0:34,0:34:96.28:0,96,1165	1/1:0,30:30:90.29:1276,90,0	0/0:19,0:19:57.18:0,57,705	0/0:34,0:34:99:0,99,1227	0/0:19,0:19:54.17:0,54,670	0/0:29,0:29:81.25:0,81,1004	0/0:20,0:20:54.17:0,54,669	0/0:24,0:24:66.19:0,66,805	0/0:25,0:25:75.22:0,75,917	0/0:14,0:14:39.12:0,39,484	0/0:38,0:38:99:0,111,1363	0/0:30,0:30:90.27:0,90,1102	1/1:0,18:18:54.18:778,54,0	1/1:1,31:32:87.29:1250,87,0	1/1:1,42:43:99:1769,123,0	0/0:18,0:18:51.15:0,51,621	0/0:25,0:25:69.20:0,69,842	0/0:33,0:33:99:0,99,1213	0/0:17,0:17:51.16:0,51,632	1/1:0,31:31:93.29:1318,93,0	1/1:1,25:25:69.23:994,69,0	1/1:0,12:12:36.12:518,36,0
chr10	85457840	.	CCT	C	4103.58	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.258;DP=498;FS=3.082;HRun=0;HaplotypeScore=93.1741;InbreedingCoeff=0.9820;MQ=78.11;MQ0=0;MQRankSum=-3.033;QD=31.81;ReadPosRankSum=1.022;VQSLOD=5.7832;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:51.17:689,51,0	1/1:0,6:6:15.03:203,15,0	0/0:22,0:15:24.25:0,24,328	0/0:46,0:31:27.73:0,28,594	0/0:11,0:11:33.06:0,33,492	0/0:19,0:19:51.17:0,51,883	1/1:2,23:25:57.19:771,57,0	0/0:15,0:15:39.13:0,39,684	0/0:15,0:15:45.15:0,45,771	1/1:3,12:15:36.12:484,36,0	1/1:3,10:13:24.08:324,24,0	0/0:19,0:19:57.18:0,57,971	0/0:16,0:15:45.14:0,45,744	0/0:20,0:20:51.17:0,51,889	0/0:22,0:22:60.18:0,60,1014	0/0:15,0:15:39.12:0,39,656	1/1:4,26:30:78.09:1028,78,0	1/1:0,17:17:45.15:604,45,0	0/0:9,0:9:24.08:0,24,420	0/0:9,0:9:18.05:0,18,287	0/0:21,0:21:42.14:0,42,711	0/0:20,0:20:51.17:0,51,893	0/0:9,0:9:27.09:0,27,473	0/0:38,0:38:99:0,108,1892	0/0:19,0:19:57.20:0,57,990	0/0:10,0:10:30.09:0,30,487	0/0:10,0:10:18.06:0,18,306	0/0:3,0:3:9.01:0,9,129
chr10	85457880	.	C	CCCCACA	2354.23	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-2.237;DP=434;FS=1.260;HRun=0;HaplotypeScore=119.6197;InbreedingCoeff=0.8667;MQ=75.89;MQ0=0;MQRankSum=-2.682;QD=24.27;ReadPosRankSum=-4.744;VQSLOD=2.5519;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.21:0,78,1625	0/0:5,0:5:15.05:0,15,337	0/1:20,0:18:6.47:6,0,318	0/0:26,0:16:17.78:0,18,278	0/0:12,0:12:33.05:0,33,585	0/0:8,0:8:17.94:0,18,283	0/0:23,0:23:51.12:0,51,1001	1/1:14,0:14:33.84:487,34,0	0/0:17,0:17:48.16:0,48,1067	0/0:8,0:8:24.03:0,24,464	0/0:16,0:16:43.86:0,44,878	0/0:18,0:18:42.11:0,42,851	0/0:13,0:13:33.02:0,33,574	0/0:16,0:16:30.07:0,30,620	0/0:15,0:15:33.05:0,33,514	0/0:17,0:17:47.59:0,48,1049	0/0:24,0:24:57.17:0,57,1182	0/0:19,0:19:42.07:0,42,842	1/1:2,2:7:18.05:387,18,0	1/1:3,7:14:20.88:399,21,0	1/1:2,7:18:3.01:107,3,0	0/0:15,0:15:38.93:0,39,827	0/0:7,0:7:21.04:0,21,398	0/0:32,0:32:54.96:0,55,1464	0/0:19,0:19:54.14:0,54,1062	1/1:1,5:10:24.81:403,25,0	1/1:0,3:9:9.03:322,9,0	1/1:0,4:5:12.04:430,12,0
chr10	85459023	.	AGAGAGAGT	A	3107.65	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=-3.604;DP=556;FS=30.718;HRun=0;HaplotypeScore=123.8164;InbreedingCoeff=-0.1055;MQ=62.92;MQ0=5;MQRankSum=1.717;QD=9.71;ReadPosRankSum=0.723;VQSLOD=0.6640;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:99:181,0,121	0/1:7,0:7:8.33:88,0,8	0/0:19,0:12:26.99:0,27,299	0/0:30,0:14:16.13:0,16,218	0/0:23,0:23:50.97:0,51,885	0/0:21,0:21:50.73:0,51,631	0/1:20,0:20:99:129,0,713	0/1:34,0:33:99:553,0,235	0/0:16,0:16:42.04:0,42,989	0/1:28,0:28:99:241,0,406	0/1:14,0:14:48.46:222,0,48	1/1:3,14:17:8.92:189,9,0	1/1:0,9:9:9.03:259,9,0	0/1:20,0:20:41.04:41,0,102	0/1:27,0:27:99:149,0,869	0/1:15,0:14:94.22:94,0,385	0/0:23,0:23:12.21:0,12,68	0/1:9,0:8:23.88:24,0,378	0/1:20,0:19:99:235,0,355	0/1:9,0:9:54.71:145,0,55	0/0:21,0:21:15.04:0,15,191	0/0:14,0:13:30.05:0,30,585	0/0:18,0:18:42.05:0,42,704	0/0:40,0:39:89.68:0,90,1753	0/0:11,0:11:27.05:0,27,678	0/1:29,0:29:99:315,0,632	0/1:26,0:26:99:254,0,623	1/1:8,0:8:20.93:165,21,0
chr10	85459025	.	AGAGAGT	A	3929.14	PASS	AB=0.959;AC=25;AF=0.446;AN=56;BaseQRankSum=-3.498;DP=543;FS=27.448;HRun=0;HaplotypeScore=104.3732;InbreedingCoeff=0.1388;MQ=63.45;MQ0=5;MQRankSum=1.087;QD=11.62;ReadPosRankSum=0.899;VQSLOD=1.0414;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:35.06:318,35,0	1/1:7,0:7:19.20:192,19,0	0/0:18,0:12:26.99:0,27,299	0/0:28,0:14:16.24:0,16,218	0/0:21,0:21:50.97:0,51,726	0/0:22,0:22:53.73:0,54,581	0/1:19,0:19:99:155,0,449	0/1:35,0:34:47.37:587,0,47	0/0:17,0:17:45.03:0,45,790	0/1:29,0:29:83.58:455,0,84	1/1:14,0:14:29.78:234,30,0	1/1:15,0:15:6.02:108,6,0	1/1:9,0:9:9.03:162,9,0	0/1:3,14:17:9.34:136,0,9	0/1:25,0:25:99:149,0,568	0/1:17,0:16:99:139,0,247	1/1:21,0:21:2.37:25,2,0	0/1:9,0:8:44.22:44,0,236	0/1:20,0:19:99:252,0,160	0/1:9,0:9:28.56:145,0,29	0/0:22,0:22:0:0,0,0	0/0:14,0:13:30.02:0,30,429	0/0:16,0:16:33.02:0,33,462	0/0:38,0:37:74.83:0,75,1278	0/0:9,0:9:27.05:0,27,524	0/1:30,0:30:99:403,0,397	0/1:25,0:25:99:261,0,381	1/1:8,0:8:20.93:165,21,0
chr10	85459027	.	AGAGT	A	4416.19	PASS	AB=0.996;AC=28;AF=0.519;AN=54;BaseQRankSum=-4.769;DP=520;FS=7.324;HRun=0;HaplotypeScore=84.1201;InbreedingCoeff=0.3832;MQ=67.79;MQ0=3;MQRankSum=-0.172;QD=13.80;ReadPosRankSum=0.776;VQSLOD=3.7634;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:38.46:342,38,0	1/1:7,0:7:20.95:190,21,0	0/0:20,0:14:29.58:0,30,329	0/0:30,0:16:22.24:0,22,272	0/0:22,0:22:53.96:0,54,593	0/0:23,0:23:56.72:0,57,523	0/1:20,0:20:99:176,0,200	1/1:31,0:31:24.77:643,25,0	0/0:15,0:15:42:0,42,565	1/1:1,23:24:46.97:614,47,0	1/1:11,0:11:29.79:233,30,0	1/1:15,0:15:6.02:80,6,0	1/1:9,0:9:9.03:120,9,0	1/1:15,0:15:9.02:105,9,0	0/1:25,0:25:99:149,0,302	0/1:16,0:16:90.66:143,0,91	1/1:2,18:20:5.13:118,5,0	0/1:8,0:8:46.97:47,0,142	0/1:20,0:19:25.32:332,0,25	0/1:9,0:9:2.41:145,0,2	./.	0/0:14,0:13:29.99:0,30,325	0/0:14,0:14:29.99:0,30,316	0/0:36,0:35:70.85:0,71,840	0/0:9,0:9:21.03:0,21,333	0/1:29,1:30:99:448,0,193	0/1:25,0:25:99:318,0,190	1/1:10,0:10:26.92:214,27,0
chr10	85459029	.	AGT	A	4515.26	PASS	AB=1.000;AC=32;AF=0.593;AN=54;BaseQRankSum=-3.722;DP=509;FS=0.000;HRun=0;HaplotypeScore=67.7907;InbreedingCoeff=0.6553;MQ=69.29;MQ0=3;MQRankSum=-1.064;QD=14.24;ReadPosRankSum=-0.124;VQSLOD=4.3111;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:40.19:325,40,0	1/1:7,0:7:20.94:169,21,0	0/0:22,0:16:32.12:0,32,357	0/0:30,0:16:22.19:0,22,271	0/0:23,0:23:56.77:0,57,475	0/0:23,0:23:53.68:0,54,434	0/1:20,0:20:8.80:253,0,9	1/1:33,0:33:86.95:789,87,0	0/0:14,0:14:27.91:0,28,356	1/1:24,0:24:59.96:523,60,0	1/1:11,0:11:29.79:233,30,0	1/1:15,0:15:6:52,6,0	1/1:9,0:9:9:78,9,0	1/1:15,0:15:6.47:53,6,0	0/1:25,0:25:12.34:173,0,12	0/1:14,0:14:1.41:172,0,1	1/1:20,0:20:6:55,6,0	0/1:8,0:8:25.21:53,0,25	1/1:18,0:17:22.26:343,22,0	1/1:8,0:8:20.73:168,21,0	./.	0/0:13,0:12:29.98:0,30,269	0/0:12,0:12:29.97:0,30,259	0/0:32,0:31:28.80:0,29,563	0/0:7,0:7:18:0,18,214	1/1:31,0:31:29.35:498,29,0	1/1:26,0:26:2.39:365,2,0	1/1:10,0:10:26.92:214,27,0
chr10	85459558	.	CGTGCGTGTGTGTGT	C	2122.97	PASS	AB=0.833;AC=13;AF=0.232;AN=56;BaseQRankSum=9.866;DP=486;FS=1.187;HRun=0;HaplotypeScore=175.7992;InbreedingCoeff=0.6527;MQ=60.71;MQ0=5;MQRankSum=-2.028;QD=14.74;ReadPosRankSum=0.670;VQSLOD=2.7764;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:22:4.75:203,5,0	1/1:3,4:7:21.02:453,21,0	0/0:23,0:14:41.62:0,42,417	0/0:24,0:15:36.02:0,36,361	0/0:21,0:20:56.53:0,57,1776	0/0:8,0:8:17.91:0,18,305	1/1:21,0:21:50.83:418,51,0	0/0:28,0:27:78.16:0,78,722	0/0:9,0:8:23.94:0,24,508	1/1:2,17:20:41.03:725,41,0	1/1:1,16:17:8.91:272,9,0	0/0:15,0:15:24.32:0,24,255	0/0:13,0:13:26.60:0,27,434	0/0:17,0:17:35.89:0,36,575	0/0:14,0:14:23.37:0,23,347	0/0:17,0:17:48.95:0,49,1020	0/1:0,0:21:16.74:96,0,17	0/0:15,0:15:32.70:0,33,287	0/0:16,0:15:19.06:0,19,218	0/0:14,0:14:20.83:0,21,208	0/0:25,0:25:41.54:0,42,394	0/0:10,0:10:23.97:0,24,579	0/0:11,0:11:27.82:0,28,812	0/0:37,0:37:53.20:0,53,1187	0/0:14,0:14:26.98:0,27,529	0/1:24,0:24:59.94:60,0,382	0/1:12,0:12:73.02:73,0,181	0/0:11,0:11:32.87:0,33,323
chr10	85459562	.	CGT	C	782.72	PASS	AB=0.930;AC=36;AF=0.818;AN=44;BaseQRankSum=2.016;DP=480;FS=6.411;HRun=0;HaplotypeScore=90.3271;InbreedingCoeff=-0.0835;MQ=58.09;MQ0=9;MQRankSum=-0.378;QD=2.32;ReadPosRankSum=2.319;VQSLOD=1.3295;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:22:6.88:8,0,7	1/1:8,0:8:1.48:48,1,0	./.	./.	0/1:23,1:23:13.53:14,0,156	1/1:7,0:7:2.94:18,3,0	./.	./.	0/1:9,1:9:22.83:23,0,36	1/1:20,0:20:11.20:55,11,0	1/1:17,0:17:5.68:28,6,0	1/1:7,0:13:2.41:13,2,0	1/1:11,0:11:2.83:15,3,0	1/1:10,0:13:5.68:28,6,0	1/1:17,0:15:5.63:35,6,0	1/1:17,0:17:24.23:152,24,0	0/1:21,0:21:11.74:36,0,12	0/1:12,0:16:8.14:8,0,15	1/1:13,0:12:0.89:2,1,0	0/0:9,0:11:0.87:0,1,2	./.	1/1:8,4:11:3.01:33,3,0	1/1:10,1:11:11.86:110,12,0	1/1:19,21:41:12.65:155,13,0	0/1:9,1:10:14.64:15,0,18	1/1:17,0:23:11.32:55,11,0	1/1:6,0:11:4.62:47,5,0	./.
chr10	85459606	.	TGTGCGA	T	812.95	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=6.981;DP=494;FS=29.066;HRun=0;HaplotypeScore=133.2350;InbreedingCoeff=0.1760;MQ=52.63;MQ0=10;MQRankSum=-3.513;QD=4.93;ReadPosRankSum=1.616;VQSLOD=0.8579;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:17.20:0,17,470	0/1:10,0:10:9.42:9,0,262	0/0:11,0:6:17.80:0,18,218	0/0:11,0:7:17.59:0,18,152	0/0:21,0:20:46.74:0,47,848	0/0:7,0:7:14.59:0,15,244	0/0:17,0:16:26.24:0,26,582	0/0:24,0:22:45.74:0,46,736	0/0:7,0:6:5.68:0,6,198	0/1:32,0:32:13.21:13,0,834	0/1:25,0:25:2.11:2,0,342	0/0:12,0:12:15.18:0,15,214	0/0:6,0:6:8.42:0,8,145	0/0:14,0:14:8.30:0,8,402	1/1:3,13:13:6.49:112,6,0	1/1:14,1:15:42.14:709,42,0	0/0:29,0:29:19.70:0,20,509	0/0:15,0:15:15.70:0,16,358	0/0:11,0:11:32.77:0,33,424	0/0:19,0:18:30.36:0,30,437	0/1:25,0:24:14.15:14,0,153	0/0:11,0:10:15.05:0,15,234	0/1:15,0:15:15.74:16,0,416	0/0:48,0:48:78.19:0,78,1244	0/1:11,0:11:10.42:10,0,447	0/0:26,0:26:21.11:0,21,697	0/1:16,0:16:74.49:74,0,258	0/0:5,0:5:15.05:0,15,214
chr10	85460049	.	GC	G	3937.72	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.033;DP=486;FS=3.677;HRun=2;HaplotypeScore=53.7778;InbreedingCoeff=0.9438;MQ=87.01;MQ0=0;MQRankSum=-2.298;QD=33.09;ReadPosRankSum=0.054;VQSLOD=3.4026;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,35:36:90.29:1168,90,0	1/1:0,4:4:9.03:117,9,0	0/0:20,0:20:60.08:0,60,776	0/0:22,0:22:58.69:0,59,774	0/0:13,0:13:39.12:0,39,565	0/0:16,0:16:45.14:0,45,655	1/1:0,31:31:78.25:1011,78,0	0/0:28,0:28:72.24:0,72,1061	0/0:11,0:11:33.11:0,33,494	1/1:0,13:13:33.06:397,33,0	1/1:0,8:8:21.07:273,21,0	0/0:22,0:22:66.22:0,66,988	0/0:14,0:14:42.05:0,42,575	0/0:18,0:18:51.17:0,51,763	0/0:14,0:14:42.10:0,42,585	0/0:5,0:5:15.05:0,15,224	1/1:0,27:27:75.24:973,75,0	0/0:33,0:33:93.27:0,93,1368	0/0:15,0:15:45.14:0,45,654	0/0:11,0:11:30.09:0,30,428	0/0:22,0:22:63.21:0,63,943	0/0:13,0:13:39.13:0,39,582	0/0:12,0:12:36.12:0,36,538	0/0:30,0:30:84.27:0,84,1235	0/0:14,0:14:42.14:0,42,622	0/0:15,1:16:3.11:0,3,540	0/0:14,0:14:42.13:0,42,608	0/0:4,0:4:12.04:0,12,180
chr10	85460200	.	T	TGCGCGC	1514.57	PASS	AB=0.611;AC=23;AF=0.460;AN=50;BaseQRankSum=-0.782;DP=403;FS=9.260;HRun=0;HaplotypeScore=88.6809;InbreedingCoeff=0.7458;MQ=70.23;MQ0=20;MQRankSum=-1.687;QD=9.02;ReadPosRankSum=-3.183;VQSLOD=-0.0622;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:22:2.87:49,3,0	./.	0/0:10,0:10:1.27:0,1,5	0/0:10,0:9:1.82:0,2,5	0/0:14,0:14:12.04:0,12,235	0/0:14,0:14:30.05:0,30,635	1/1:21,0:20:15.05:292,15,0	1/1:10,0:10:9.01:86,9,0	0/0:5,0:5:3.01:0,3,65	1/1:13,0:13:12.03:199,12,0	1/1:10,0:10:3:25,3,0	0/0:22,0:19:39.10:0,39,718	0/0:9,0:9:14.97:0,15,268	0/0:15,0:15:24.05:0,24,418	1/1:11,0:10:9.03:150,9,0	1/1:9,0:8:2.37:8,2,0	1/1:14,0:14:8.40:185,8,0	0/0:25,0:25:48.63:0,49,984	1/1:15,0:14:23.56:221,24,0	0/1:4,5:10:0:0,0,0	./.	0/0:14,0:14:27.09:0,27,527	0/0:15,0:14:14.94:0,15,305	0/0:20,0:20:23.87:0,24,423	0/0:14,0:13:21.07:0,21,431	1/1:8,8:13:18.06:333,18,0	1/1:7,6:12:6.02:145,6,0	./.
chr10	85460244	.	CAT	C	1114.56	PASS	AB=1.000;AC=26;AF=0.591;AN=44;BaseQRankSum=1.933;DP=424;FS=10.915;HRun=0;HaplotypeScore=55.0040;InbreedingCoeff=-0.1814;MQ=34.64;MQ0=73;MQRankSum=0.124;QD=3.07;ReadPosRankSum=-0.565;VQSLOD=0.1159;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:20:0:0,0,0	./.	./.	./.	0/1:19,0:17:25.40:41,0,25	0/1:16,0:14:66.36:66,0,90	1/1:29,0:24:2.16:23,2,0	0/0:18,0:15:41.31:0,41,216	0/1:10,0:7:13.02:14,0,13	1/1:6,4:7:0.89:2,1,0	./.	0/1:30,0:23:17.55:68,0,18	0/1:15,0:11:20.96:46,0,21	0/1:17,0:16:34.45:34,0,59	./.	1/1:12,0:10:0.72:2,1,0	1/1:24,0:21:39.21:230,39,0	1/1:24,0:21:20.76:326,21,0	0/1:9,0:8:20.67:61,0,21	./.	0/1:44,0:27:28.54:29,0,49	0/0:9,0:8:11.89:0,12,91	0/0:6,3:8:5.99:0,6,49	0/1:31,0:27:67.57:77,0,68	0/1:15,0:9:27.42:50,0,27	0/1:17,0:14:33.46:70,0,33	1/1:9,0:8:13.68:87,14,0	1/1:6,0:1:2.99:24,3,0
chr10	85460603	.	GA	G	517.26	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.018;DP=435;FS=0.848;HRun=7;HaplotypeScore=48.1036;InbreedingCoeff=0.8302;MQ=65.07;MQ0=25;MQRankSum=1.306;QD=17.84;ReadPosRankSum=2.195;VQSLOD=3.2403;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:84.20:0,84,1001	0/0:5,0:5:15.05:0,15,189	0/0:30,0:17:23.19:0,23,142	0/0:17,0:7:8.57:0,9,106	0/0:11,0:10:24.08:0,24,301	0/0:12,0:12:33.11:0,33,415	0/0:15,0:15:39.07:0,39,455	0/0:24,0:19:54.16:0,54,650	0/0:11,0:9:27.07:0,27,326	0/0:25,0:23:57.18:0,57,714	0/0:7,0:7:12.04:0,12,147	0/0:11,0:10:21.07:0,21,264	0/0:7,0:7:18.04:0,18,211	0/0:6,0:6:12.04:0,12,151	0/0:7,0:6:12.04:0,12,150	0/0:13,0:12:24.08:0,24,302	0/0:29,0:29:66.20:0,66,817	1/1:4,25:27:60.14:612,60,0	0/0:20,0:18:54.17:0,54,669	0/0:10,0:10:30.05:0,30,351	0/0:17,0:16:42.13:0,42,528	0/0:12,0:12:24.08:0,24,297	0/0:12,0:11:21:0,21,244	0/0:10,0:11:22.33:0,22,333	0/0:16,0:13:36.11:0,36,437	0/0:15,0:14:42.10:0,42,490	0/0:16,0:15:42.11:0,42,500	0/0:12,0:10:27.09:0,27,340
chr10	85461236	.	A	AT	2120.63	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-9.915;DP=533;FS=5.013;HRun=9;HaplotypeScore=55.3854;InbreedingCoeff=0.9965;MQ=85.97;MQ0=0;MQRankSum=0.129;QD=22.09;ReadPosRankSum=-0.305;VQSLOD=4.2457;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,11:18:33.08:358,33,0	1/1:1,9:10:24.06:266,24,0	0/0:25,0:25:18.36:0,18,226	0/0:20,0:21:28.44:0,28,299	0/0:22,0:22:56.89:0,57,486	0/0:17,0:17:44.99:0,45,391	1/1:2,9:11:27.07:299,27,0	0/0:29,0:29:65.98:0,66,573	0/0:23,0:23:56.95:0,57,491	1/1:5,13:20:41.76:417,42,0	1/1:3,11:14:33.09:365,33,0	0/0:17,0:17:44.96:0,45,387	0/0:20,0:20:50.98:0,51,439	0/0:12,0:12:35.99:0,36,313	0/0:19,0:19:47.97:0,48,412	0/0:17,0:17:26.64:0,27,392	1/1:2,21:23:34.12:604,34,0	0/0:3,0:32:52.95:0,53,156	0/0:24,0:24:62.96:0,63,544	0/0:20,0:20:50.97:0,51,442	0/0:16,0:16:44.99:0,45,391	0/0:13,0:13:35.99:0,36,313	0/0:20,0:20:56.99:0,57,495	0/0:22,1:23:26.80:0,27,462	0/0:11,0:11:29.99:0,30,260	0/0:17,0:17:35.86:0,36,302	0/0:27,0:27:71.95:0,72,621	0/0:12,0:12:23.98:0,24,204
chr10	85461529	.	C	CCT	1848.01	PASS	AB=0.806;AC=32;AF=0.571;AN=56;BaseQRankSum=2.421;DP=439;FS=11.550;HRun=0;HaplotypeScore=84.1672;InbreedingCoeff=0.6341;MQ=72.43;MQ0=7;MQRankSum=-2.697;QD=5.85;ReadPosRankSum=-2.755;VQSLOD=1.2711;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,18:29:31.47:395,0,31	1/1:4,0:4:8.80:78,9,0	0/1:42,0:19:0:0,0,0	0/1:45,0:15:3.03:3,0,26	0/0:20,0:20:15:0,15,149	0/0:12,0:13:26.91:0,27,284	1/1:11,0:11:6:51,6,0	1/1:20,0:19:11.88:86,12,0	0/0:8,0:8:9.02:0,9,101	1/1:10,3:14:9.03:136,9,0	1/1:3,9:12:21.07:301,21,0	0/0:4,0:14:11.36:0,11,56	0/0:4,0:12:8.52:0,9,42	0/0:1,0:6:11.36:0,11,56	1/1:11,0:14:3:26,3,0	1/1:9,0:14:17.99:156,18,0	0/1:8,8:18:42.06:145,0,42	1/1:12,0:12:12.01:121,12,0	1/1:12,0:13:11.74:89,12,0	1/1:19,0:18:8.97:74,9,0	1/1:7,0:7:8.94:67,9,0	0/0:17,0:17:38.99:0,39,417	0/0:12,0:12:18.49:0,18,185	0/0:8,0:8:21.06:0,21,236	0/0:10,0:12:14.83:0,15,135	1/1:18,0:18:27.48:236,27,0	1/1:11,0:11:5.99:50,6,0	1/1:12,0:11:5.56:30,6,0
chr10	85462748	.	AT	A	4096.04	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=2.479;DP=677;FS=8.069;HRun=9;HaplotypeScore=87.3171;InbreedingCoeff=0.9998;MQ=83.10;MQ0=0;MQRankSum=-2.406;QD=22.76;ReadPosRankSum=-1.892;VQSLOD=3.3400;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:30:62.83:0,63,336	0/0:0,0:12:31.25:0,31,159	0/0:27,0:25:36.68:0,37,349	0/0:25,0:24:36.80:0,37,520	0/0:27,0:27:63.19:0,63,726	0/0:20,0:20:54.16:0,54,622	0/0:7,0:29:59.82:0,60,324	1/1:2,17:19:53.06:473,53,0	0/0:30,0:30:87.20:0,87,976	0/0:10,0:38:55.15:0,55,372	0/0:1,0:14:37.06:0,37,193	0/0:20,1:21:32.71:0,33,629	0/0:27,0:27:75.22:0,75,858	0/0:25,0:25:63.18:0,63,718	1/1:1,20:21:57.03:522,57,0	1/1:1,14:15:32.53:302,33,0	0/0:5,0:37:85.38:0,85,444	0/0:32,0:32:84.21:0,84,945	1/1:2,14:16:42.01:384,42,0	1/1:1,18:19:42.01:384,42,0	1/1:5,21:26:60.03:549,60,0	0/0:28,0:28:78.23:0,78,894	0/0:30,0:30:81.24:0,81,933	0/0:26,1:27:50.74:0,51,820	0/0:17,0:17:42.12:0,42,485	1/1:3,16:19:48.02:439,48,0	1/1:2,21:23:54.03:494,54,0	1/1:0,22:22:60.03:549,60,0
chr10	85464274	.	GC	G	3145.12	PASS	AB=0.974;AC=19;AF=0.339;AN=56;BaseQRankSum=3.975;DP=494;FS=0.000;HRun=10;HaplotypeScore=60.7652;InbreedingCoeff=0.7888;MQ=72.64;MQ0=0;MQRankSum=-0.732;QD=15.57;ReadPosRankSum=1.493;VQSLOD=3.8875;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:8:5.78:0,6,32	0/0:2,0:5:2.84:0,3,14	0/0:14,0:13:26.09:0,26,250	0/1:9,0:9:10.97:11,0,62	0/0:29,1:30:45.65:0,46,703	0/0:16,0:16:45.12:0,45,497	0/0:21,0:21:35.73:0,36,501	1/1:9,12:22:38.01:319,38,0	0/0:18,1:19:28.08:0,28,530	0/0:11,0:11:17.64:0,18,123	0/1:11,0:11:0.17:0,0,0	0/0:18,1:19:22.07:0,22,464	0/0:19,0:19:54.08:0,54,561	0/0:19,0:19:45.10:0,45,481	0/0:23,0:23:66.17:0,66,723	0/0:13,1:15:12.87:0,13,344	0/0:8,0:25:25.99:0,26,161	1/1:2,13:16:41.03:345,41,0	1/1:9,11:20:32.98:286,33,0	1/1:2,24:26:68.95:593,69,0	1/1:4,24:28:59.96:517,60,0	0/1:11,1:12:1.99:2,0,208	0/0:12,1:13:7.01:0,7,284	0/0:18,0:19:41.16:0,41,484	0/0:16,0:16:45.07:0,45,483	1/1:4,19:23:56.97:491,57,0	1/1:2,21:23:59.98:521,60,0	1/1:0,12:12:29.99:260,30,0
chr10	85464529	.	C	CTGT	7431.66	PASS	AB=0.667;AC=29;AF=0.518;AN=56;BaseQRankSum=0.870;DP=721;FS=6.045;HRun=0;HaplotypeScore=129.6918;InbreedingCoeff=0.8810;MQ=65.52;MQ0=10;MQRankSum=-2.502;QD=18.86;ReadPosRankSum=-2.140;VQSLOD=4.0622;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:37:53.24:507,53,0	1/1:6,0:8:6.02:70,6,0	0/0:27,0:21:11.98:0,12,118	0/0:34,0:18:3.01:0,3,40	0/0:30,0:30:53.27:0,53,695	0/0:24,0:24:57.16:0,57,740	1/1:26,0:31:29.71:386,30,0	1/1:23,0:22:18.05:248,18,0	0/0:18,0:18:33.09:0,33,426	1/1:24,0:29:41.91:429,42,0	1/1:21,0:19:23.84:204,24,0	0/0:27,0:27:66.19:0,66,862	0/0:21,0:21:42.12:0,42,547	0/0:28,0:28:66.22:0,66,894	1/1:24,0:26:43.67:394,44,0	1/1:20,7:26:51.16:922,51,0	1/1:29,0:35:48.35:526,48,0	0/0:18,0:22:14.57:0,15,99	1/1:22,4:24:19.30:308,19,0	1/1:19,11:30:51.13:883,51,0	1/1:20,7:27:33.11:577,33,0	0/0:19,0:19:26.92:0,27,365	0/0:14,0:14:33.07:0,33,398	0/0:39,0:39:90.26:0,90,1179	0/0:21,0:21:39.12:0,39,511	1/1:19,6:24:30.56:535,31,0	1/1:23,7:30:48.15:846,48,0	0/1:8,8:16:31.85:598,0,32
chr10	85464552	.	GTTGT	G	513.02	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=4.298;DP=737;FS=3.245;HRun=0;HaplotypeScore=157.3302;InbreedingCoeff=0.6424;MQ=59.31;MQ0=20;MQRankSum=-3.999;QD=7.77;ReadPosRankSum=-0.917;VQSLOD=2.4903;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:38:99:0,105,2017	0/0:7,0:7:21.07:0,21,386	0/0:48,0:29:43.03:0,43,1097	0/1:44,0:15:6.34:6,0,490	0/0:33,0:33:96.30:0,96,2111	0/0:25,0:25:75.26:0,75,1844	0/0:27,0:27:81.27:0,81,1791	0/0:21,0:20:57.11:0,57,924	0/0:18,0:18:54.17:0,54,1187	0/0:26,0:26:69.23:0,69,1402	0/0:22,0:20:60.19:0,60,1181	0/0:31,0:31:87.26:0,87,2015	0/0:18,0:18:51.17:0,51,1259	0/0:24,0:24:72.25:0,72,1883	0/0:28,0:28:81.26:0,81,1658	0/0:21,0:20:60.20:0,60,1178	0/0:33,0:33:93.16:0,93,1736	1/1:17,5:21:9.33:596,9,0	0/0:33,0:29:79.18:0,79,1315	0/0:32,0:32:93.30:0,93,1737	0/0:23,0:23:57.81:0,58,1042	0/0:21,0:21:58.05:0,58,1197	0/0:22,0:22:66.22:0,66,1399	0/0:36,0:36:99:0,105,2767	0/0:21,0:21:60.20:0,60,1420	0/0:17,0:16:46.96:0,47,831	0/0:23,0:23:66.22:0,66,1248	0/0:18,0:18:54.18:0,54,1069
chr10	85464555	.	GT	G	463.92	PASS	AB=0.977;AC=3;AF=0.054;AN=56;BaseQRankSum=4.319;DP=728;FS=3.264;HRun=2;HaplotypeScore=117.6581;InbreedingCoeff=0.6623;MQ=59.06;MQ0=19;MQRankSum=-4.296;QD=7.14;ReadPosRankSum=-0.445;VQSLOD=0.7301;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:36:99:0,99,1343	0/0:7,0:7:21.06:0,21,277	0/0:50,0:28:46.20:0,46,936	0/1:42,1:16:11.30:11,0,415	0/0:33,0:33:96.27:0,96,1341	0/0:26,0:26:78.25:0,78,1125	0/0:26,0:26:78.20:0,78,1043	0/0:22,0:21:60.05:0,60,754	0/0:18,0:18:54.17:0,54,765	0/0:21,0:21:60.13:0,60,742	0/0:21,0:19:57.19:0,57,805	0/0:31,0:31:84.20:0,84,1163	0/0:20,0:20:51.16:0,51,736	0/0:24,0:24:72.23:0,72,1056	0/0:28,0:28:81.24:0,81,1118	0/0:19,0:18:54.01:0,54,525	0/0:34,0:34:93:0,93,1119	1/1:8,14:21:29.69:555,30,0	0/0:29,0:26:72.37:0,72,882	0/0:32,0:32:93.15:0,93,1093	0/0:23,0:23:60.32:0,60,683	0/0:21,0:21:55.01:0,55,741	0/0:22,0:22:66.22:0,66,947	0/0:39,0:39:99:0,114,1666	0/0:22,0:22:66.22:0,66,959	0/0:16,0:15:42.02:0,42,424	0/0:22,0:22:63.07:0,63,680	0/0:18,0:18:54.07:0,54,611
chr10	85464561	.	G	GT	1909.60	PASS	AB=0.880;AC=12;AF=0.214;AN=56;BaseQRankSum=8.013;DP=715;FS=7.255;HRun=2;HaplotypeScore=112.8321;InbreedingCoeff=-0.2832;MQ=66.46;MQ0=19;MQRankSum=-3.963;QD=6.52;ReadPosRankSum=-2.614;VQSLOD=-0.3925;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:24,11:34:99:392,0,410	0/0:5,0:5:7.85:0,8,137	0/0:53,0:33:92.66:0,93,1119	0/0:44,0:18:31.71:0,32,440	0/0:28,0:28:84.23:0,84,1055	0/0:27,0:27:72.22:0,72,919	0/1:17,9:26:99:480,0,196	0/1:24,0:23:10.74:11,0,482	0/0:18,0:18:54.16:0,54,684	0/1:17,3:21:99:146,0,318	0/1:12,5:18:99:198,0,313	0/0:27,0:27:75.24:0,75,969	0/0:19,0:19:54.16:0,54,683	0/0:25,0:25:75.24:0,75,972	0/1:23,6:29:99:223,0,534	0/1:18,0:17:22.27:22,0,44	0/1:23,11:34:99:388,0,465	0/0:23,0:22:54.16:0,54,650	0/0:30,0:27:38.34:0,38,610	0/1:30,0:30:85.37:85,0,364	0/0:22,0:22:3.60:0,4,214	0/0:18,0:18:44.34:0,44,578	0/0:22,0:22:66.18:0,66,824	0/0:39,0:39:99:0,117,1512	0/0:21,0:21:63.20:0,63,816	0/1:14,1:14:39.14:39,0,140	0/1:21,0:21:48.72:49,0,182	0/1:18,0:18:25.68:26,0,155
chr10	85464630	.	T	TA	8679.47	PASS	AB=0.572;AC=34;AF=0.607;AN=56;BaseQRankSum=-12.792;DP=617;FS=6.595;HRun=10;HaplotypeScore=61.5691;InbreedingCoeff=0.8520;MQ=75.59;MQ0=0;MQRankSum=-1.064;QD=22.26;ReadPosRankSum=0.540;VQSLOD=5.7611;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,30:34:84.20:888,84,0	1/1:1,13:14:36.09:384,36,0	0/0:16,0:16:4.76:0,5,86	0/0:12,0:12:26.83:0,27,211	0/0:27,0:28:73.75:0,74,581	0/0:30,0:30:80.87:0,81,662	1/1:3,16:19:17.46:391,17,0	1/1:8,21:29:35.51:575,36,0	0/0:24,0:24:62.90:0,63,514	0/1:5,20:25:10.78:513,0,11	1/1:5,14:19:36.09:384,36,0	1/1:1,16:17:33.08:352,33,0	1/1:2,20:22:35.51:583,36,0	1/1:1,20:21:60.15:640,60,0	1/1:5,23:28:57.14:608,57,0	1/1:1,7:8:21.05:224,21,0	1/1:7,21:29:53.20:602,53,0	0/0:19,0:20:46.90:0,47,365	1/1:5,16:22:26.30:462,26,0	1/1:9,21:30:13.87:558,14,0	0/1:3,7:10:3.59:171,0,4	0/0:24,0:24:65.90:0,66,538	0/0:22,0:23:52.97:0,53,425	0/0:34,0:34:89.86:0,90,736	0/0:16,0:16:41.93:0,42,345	1/1:5,23:28:44.53:679,45,0	1/1:4,20:25:42.11:448,42,0	1/1:1,8:10:17.20:218,17,0
chr10	85465847	.	G	GACA	10199.26	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-11.806;DP=693;FS=4.477;HRun=0;HaplotypeScore=95.2971;InbreedingCoeff=0.9859;MQ=85.99;MQ0=0;MQRankSum=-5.109;QD=56.35;ReadPosRankSum=1.923;VQSLOD=7.0079;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,52:57:99:3331,147,0	1/1:0,5:5:15.05:346,15,0	0/0:21,0:21:54.14:0,54,823	0/0:28,0:28:83.73:0,84,1213	0/0:18,0:18:51.17:0,51,869	0/0:22,0:22:66.23:0,66,1125	1/1:2,33:35:93.32:2143,93,0	0/0:29,0:29:78.17:0,78,1237	0/0:22,0:22:66.22:0,66,1098	1/1:4,13:19:51.07:964,51,0	1/1:2,8:10:29.99:591,30,0	0/0:32,0:32:93.27:0,93,1549	0/0:30,0:30:84.25:0,84,1378	0/0:28,0:28:81.28:0,81,1372	0/0:24,0:24:72.23:0,72,1201	0/0:16,0:16:45.15:0,45,767	1/1:9,23:33:72.20:1585,72,0	1/1:0,21:22:54.19:1240,54,0	0/0:19,0:19:54.18:0,54,914	0/0:14,0:14:39.13:0,39,665	0/0:70,0:70:99:0,208,3478	0/0:20,0:20:60.21:0,60,1023	0/0:16,0:16:48.12:0,48,782	0/0:35,0:35:99:0,102,1731	0/0:17,0:16:48.13:0,48,788	0/0:28,1:29:12.06:0,12,1261	0/0:18,0:18:54.18:0,54,916	0/0:4,0:4:12.04:0,12,205
chr10	85466817	.	T	TG	3736.43	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-10.724;DP=457;FS=16.317;HRun=7;HaplotypeScore=53.9099;InbreedingCoeff=0.9884;MQ=80.17;MQ0=0;MQRankSum=-1.255;QD=29.89;ReadPosRankSum=-0.762;VQSLOD=2.0676;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,34:38:67.32:1094,67,0	1/1:1,4:5:12.51:146,13,0	0/0:16,0:16:24.83:0,25,302	0/0:13,0:13:24.76:0,25,291	0/0:13,0:13:29.99:0,30,280	0/0:22,0:22:30.31:0,30,469	1/1:4,19:23:54.17:652,54,0	0/0:13,0:13:30.04:0,30,285	0/0:15,0:15:33.02:0,33,306	1/1:4,12:16:36.11:435,36,0	1/1:1,12:13:33.10:399,33,0	0/0:10,0:10:18.02:0,18,174	0/0:10,0:10:27.04:0,27,261	0/0:20,0:20:48.05:0,48,458	0/0:23,0:23:51.05:0,51,487	0/0:13,0:13:33.05:0,33,318	1/1:0,29:30:84.26:1011,84,0	0/0:14,0:14:39.05:0,39,371	0/0:18,0:18:39.05:0,39,374	0/0:10,0:10:18.02:0,18,174	0/0:20,0:20:51.07:0,51,491	0/0:12,0:12:21.02:0,21,201	0/0:9,0:9:27.04:0,27,260	0/0:24,0:24:63.10:0,63,608	0/0:12,0:12:33.05:0,33,319	0/0:14,0:14:30.04:0,30,289	0/0:17,0:16:48.08:0,48,463	0/0:14,0:14:33.05:0,33,319
chr10	85467017	.	TA	T	191.41	PASS	AB=0.972;AC=4;AF=0.071;AN=56;BaseQRankSum=3.478;DP=515;FS=0.000;HRun=12;HaplotypeScore=73.6777;InbreedingCoeff=0.4991;MQ=69.97;MQ0=0;MQRankSum=0.577;QD=3.75;ReadPosRankSum=1.632;VQSLOD=0.4042;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:65.68:0,66,624	0/0:6,0:6:15.03:0,15,152	0/1:16,1:16:4.43:4,0,87	0/1:17,0:13:2.74:3,0,168	0/0:17,1:19:22.17:0,22,383	0/0:23,2:25:19.57:0,20,535	0/0:17,0:17:48.07:0,48,473	0/0:27,0:27:66.12:0,66,666	0/0:12,0:12:24.05:0,24,244	0/0:25,0:28:65.67:0,66,598	0/0:13,0:15:38.65:0,39,340	0/0:19,0:21:47.92:0,48,466	0/0:15,0:15:36.06:0,36,355	0/0:23,1:24:21.78:0,22,379	0/0:26,0:26:57.06:0,57,558	0/0:13,0:13:30.04:0,30,294	0/0:24,1:25:39.89:0,40,586	1/1:3,13:17:37.87:285,38,0	0/0:21,1:21:30.54:0,31,458	0/0:13,0:12:30.05:0,30,299	0/0:20,0:20:45.03:0,45,434	0/0:11,0:11:24.04:0,24,238	0/0:11,0:11:21.03:0,21,207	0/0:10,1:11:3.83:0,4,220	0/0:21,0:22:62.93:0,63,608	0/0:19,0:19:45.08:0,45,447	0/0:19,0:20:56.95:0,57,562	0/0:12,0:14:35.91:0,36,349
chr10	85467363	.	T	TACACACA	1199.46	PASS	AB=0.996;AC=12;AF=0.214;AN=56;BaseQRankSum=8.096;DP=457;FS=1.222;HRun=0;HaplotypeScore=127.8656;InbreedingCoeff=-0.0079;MQ=64.02;MQ0=18;MQRankSum=-6.127;QD=7.50;ReadPosRankSum=-2.303;VQSLOD=1.9231;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:46.86:0,47,600	1/1:3,0:2:3.01:60,3,0	0/0:35,0:22:60.67:0,61,817	0/0:22,0:10:23.85:0,24,295	0/0:20,0:21:60.18:0,60,996	0/0:19,0:17:28.78:0,29,494	0/0:22,0:22:12.91:0,13,481	0/1:20,0:19:94.34:94,0,464	0/0:14,0:15:10.50:0,11,474	0/1:16,0:14:99:116,0,228	0/0:13,0:13:16.60:0,17,208	0/0:7,0:9:21.06:0,21,356	0/0:5,0:8:12:0,12,130	0/0:14,0:15:39.46:0,39,504	0/0:13,0:13:36.12:0,36,741	0/0:13,0:13:39.11:0,39,733	0/1:27,0:26:87:87,0,384	0/1:28,0:25:99:155,0,431	0/1:10,0:8:80.03:80,0,181	0/1:13,0:11:35.01:35,0,95	0/0:11,0:10:21.07:0,21,286	0/0:17,0:17:33.10:0,33,565	0/0:10,0:9:21.07:0,21,329	0/0:10,0:13:2.10:0,2,401	0/0:9,0:11:27.09:0,27,487	0/1:19,0:18:99:582,0,121	1/1:2,4:14:1.72:5,2,0	0/1:9,0:7:99:128,0,142
chr10	85467408	.	C	CACACACACAAAT	8886.38	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=-2.561;DP=468;FS=4.302;HRun=0;HaplotypeScore=171.6139;InbreedingCoeff=0.6585;MQ=58.48;MQ0=14;MQRankSum=-3.379;QD=27.94;ReadPosRankSum=-4.751;VQSLOD=3.0677;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:4,11:28:9.02:103,9,0	1/1:5,0:4:7.27:147,7,0	0/0:14,0:11:23.21:0,23,304	0/0:12,0:9:6.81:0,7,184	0/0:17,0:17:44.79:0,45,959	0/0:19,0:18:25.14:0,25,594	1/1:11,0:10:16.93:248,17,0	1/1:30,0:30:71.85:1080,72,0	0/0:11,0:11:12.35:0,12,533	1/1:18,0:17:46.93:809,47,0	1/1:4,0:18:23.48:277,23,0	0/0:4,0:4:9.03:0,9,228	0/0:11,0:11:23.88:0,24,290	0/0:12,0:14:27.95:0,28,430	0/1:13,0:13:99:283,0,318	0/1:12,0:12:99:113,0,221	1/1:29,0:27:51.44:1141,51,0	0/1:32,0:28:99:391,0,117	1/1:22,0:17:39.13:793,39,0	1/1:13,0:12:25.02:417,25,0	1/1:6,0:5:9.02:115,9,0	0/0:13,0:13:29.68:0,30,599	0/0:19,0:19:40.86:0,41,711	0/1:17,0:16:22.16:22,0,678	0/0:16,0:16:42.14:0,42,855	1/1:26,0:25:71.46:1653,71,0	1/1:15,0:15:26.78:396,27,0	1/1:19,0:19:57.06:896,57,0
chr10	85467416	.	T	TA	423.62	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.145;DP=423;FS=2.935;HRun=6;HaplotypeScore=83.8520;InbreedingCoeff=0.6080;MQ=63.32;MQ0=6;MQRankSum=-3.127;QD=18.42;ReadPosRankSum=1.491;VQSLOD=3.4436;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:12.02:0,12,119	0/0:6,0:5:8:0,8,56	0/0:18,0:14:38.18:0,38,319	0/0:15,0:12:32.16:0,32,287	0/0:17,0:17:48.08:0,48,475	0/0:15,0:15:42.05:0,42,417	0/0:9,0:9:1.21:0,1,46	0/0:25,0:25:60.21:0,60,362	0/0:10,0:10:24.05:0,24,245	0/0:14,0:13:7.63:0,8,111	0/0:15,0:14:33.07:0,33,332	0/0:4,0:4:3:0,3,30	0/0:10,0:10:18.03:0,18,183	0/0:15,0:15:26.81:0,27,268	0/0:16,0:16:41.16:0,41,320	0/0:9,0:9:26.64:0,27,239	0/0:28,0:26:32.04:0,32,416	1/1:10,13:21:44.61:518,45,0	0/0:18,0:15:34.34:0,34,186	0/0:12,0:11:26.47:0,26,191	0/0:5,0:5:14.86:0,15,132	0/0:10,0:10:24.03:0,24,237	0/0:18,0:18:48.01:0,48,485	0/0:16,0:15:39.09:0,39,398	0/0:14,0:14:39.09:0,39,398	0/0:21,0:21:39.36:0,39,207	0/0:15,0:15:26.12:0,26,175	0/0:23,0:21:60.24:0,60,456
chr10	85468035	.	T	TTACCTACCTACC	11475.93	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-1.435;DP=711;FS=6.540;HRun=0;HaplotypeScore=242.4517;InbreedingCoeff=0.9853;MQ=76.59;MQ0=1;MQRankSum=-11.228;QD=48.22;ReadPosRankSum=-6.247;VQSLOD=2.7579;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:78.24:0,78,2344	0/0:10,0:10:18.05:0,18,548	0/0:34,0:30:21.41:0,21,548	0/0:34,0:33:35.48:0,35,1003	0/0:30,0:30:48.15:0,48,1561	0/0:20,0:20:48.13:0,48,1394	0/0:22,0:22:39.13:0,39,1294	1/1:29,0:29:30.06:733,30,0	0/0:29,0:29:54.14:0,54,1785	0/0:22,0:23:45.14:0,45,1349	0/0:12,0:12:21.04:0,21,483	0/0:35,0:35:90.27:0,90,2880	0/0:24,0:24:54.15:0,54,1667	0/0:27,0:27:72.23:0,72,2354	1/1:10,0:36:38.92:1672,39,0	1/1:9,0:27:27.09:1230,27,0	0/0:32,0:33:63.22:0,63,2017	0/0:7,0:14:18.03:0,18,410	1/1:14,4:20:21.95:552,22,0	1/1:17,9:29:33.83:1673,34,0	1/1:29,4:34:20.55:1036,21,0	0/0:16,0:16:36.11:0,36,1168	0/0:18,0:18:36.12:0,36,1178	0/0:25,0:25:48.05:0,48,1135	0/0:20,0:20:39.04:0,39,1005	1/1:18,13:31:30.14:2656,30,0	1/1:16,6:23:30.02:1394,30,0	1/1:3,3:9:9.03:529,9,0
chr10	85469459	.	T	TACACAC	1272.40	PASS	AB=0.997;AC=13;AF=0.232;AN=56;BaseQRankSum=9.819;DP=547;FS=1.181;HRun=0;HaplotypeScore=139.7230;InbreedingCoeff=-0.1465;MQ=52.13;MQ0=16;MQRankSum=-6.963;QD=6.46;ReadPosRankSum=-2.806;VQSLOD=1.5277;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:47.49:0,47,680	0/1:5,0:5:41.46:41,0,75	0/0:29,0:3:6.02:0,6,78	0/0:27,0:3:4.56:0,5,37	0/0:25,0:25:69.22:0,69,1366	0/0:21,0:21:54.16:0,54,1156	0/0:25,0:25:54.52:0,55,1220	0/1:20,0:20:25.54:26,0,722	0/0:23,0:23:66.18:0,66,1266	0/1:20,0:20:99:217,0,468	0/0:17,0:17:33.07:0,33,471	0/0:16,0:16:39.12:0,39,814	0/0:24,0:24:57.12:0,57,1057	0/0:20,0:20:51.16:0,51,1089	0/1:16,0:15:50.38:50,0,193	0/1:15,0:15:99:180,0,155	0/1:29,0:30:99:228,0,283	1/1:2,6:11:7.04:144,7,0	0/1:24,0:23:45.86:46,0,783	0/0:24,0:23:53.44:0,53,737	0/1:15,0:15:40.01:40,0,243	0/0:13,0:13:36.11:0,36,710	0/0:19,0:19:54.07:0,54,1128	0/0:17,0:17:45.14:0,45,874	0/0:21,0:21:60.18:0,60,1180	0/1:15,0:13:99:213,0,229	0/1:21,0:21:99:213,0,392	0/1:5,0:5:30.94:31,0,70
chr10	85469461	.	TAC	T	1007.18	PASS	AB=0.900;AC=7;AF=0.135;AN=52;BaseQRankSum=1.868;DP=618;FS=12.381;HRun=0;HaplotypeScore=109.7649;InbreedingCoeff=0.6664;MQ=51.00;MQ0=16;MQRankSum=3.989;QD=12.59;ReadPosRankSum=2.789;VQSLOD=2.9540;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:34:8.48:0,8,47	0/0:4,0:5:3:0,3,26	./.	./.	0/0:24,1:25:11.08:0,11,582	0/0:20,0:20:11.14:0,11,585	0/0:25,1:26:5.04:0,5,465	0/0:23,0:23:26.89:0,27,235	0/0:25,0:25:48.12:0,48,694	0/0:23,0:25:56.70:0,57,490	0/0:21,0:23:11.49:0,11,85	1/1:3,13:16:30.09:341,30,0	1/1:10,16:26:29.95:340,30,0	1/1:4,15:20:41.95:457,42,0	0/0:12,0:24:14.34:0,14,70	0/0:13,0:19:14.74:0,15,117	0/0:25,0:31:32.61:0,33,288	0/0:12,0:12:14.88:0,15,121	0/0:22,0:26:30.67:0,31,239	0/0:9,0:25:56.99:0,57,530	0/0:20,0:20:5.67:0,6,34	0/0:14,0:14:24.06:0,24,343	0/0:19,0:19:42:0,42,643	0/1:16,2:18:12.98:13,0,255	0/0:21,1:22:14.03:0,14,580	0/0:16,0:23:56.55:0,57,471	0/0:19,0:27:23.65:0,24,178	0/0:6,0:6:9.01:0,9,98
chr10	85469516	.	C	CT	4532.38	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-5.341;DP=557;FS=0.405;HRun=3;HaplotypeScore=79.9614;InbreedingCoeff=0.9962;MQ=76.55;MQ0=2;MQRankSum=-3.995;QD=35.69;ReadPosRankSum=1.883;VQSLOD=5.4148;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:57.19:797,57,0	1/1:1,7:8:18.06:252,18,0	0/0:24,0:23:54.15:0,54,626	0/0:18,0:18:36.60:0,37,503	0/0:24,0:24:69.21:0,69,827	0/0:19,0:19:51.16:0,51,612	1/1:1,17:18:45.15:630,45,0	0/0:19,0:19:51.14:0,51,593	0/0:17,0:17:48.15:0,48,576	1/1:3,16:19:48.16:670,48,0	1/1:4,17:21:51.17:714,51,0	0/0:14,0:14:36.11:0,36,432	0/0:23,0:23:50.55:0,51,611	0/0:23,0:23:60.18:0,60,720	0/0:29,0:29:63.16:0,63,740	0/0:14,0:14:33.10:0,33,396	1/1:3,36:39:99:1469,105,0	0/0:14,0:14:18.05:0,18,214	0/0:20,0:20:57.15:0,57,662	0/0:22,0:21:54.16:0,54,647	0/0:13,0:13:27.08:0,27,324	0/0:16,0:16:48.15:0,48,576	0/0:23,0:23:63.18:0,63,743	0/0:14,0:14:39.12:0,39,468	0/0:23,0:23:66.20:0,66,792	0/0:22,0:22:28.58:0,29,715	0/0:25,0:25:63.19:0,63,754	0/0:13,0:13:39.12:0,39,468
chr10	85469586	.	C	CT	412.61	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.151;DP=567;FS=0.000;HRun=10;HaplotypeScore=68.4875;InbreedingCoeff=0.5919;MQ=78.16;MQ0=0;MQRankSum=-0.002;QD=17.94;ReadPosRankSum=-0.669;VQSLOD=3.8655;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:74.90:0,75,614	0/0:10,0:10:26.92:0,27,216	0/0:21,0:21:5.05:0,5,163	0/0:22,0:18:10.68:0,11,95	0/0:30,0:30:74.86:0,75,609	0/0:12,0:13:34.96:0,35,273	0/0:23,0:23:60.36:0,60,487	0/0:26,0:26:51.28:0,51,408	0/0:14,1:15:0.95:0,1,214	0/0:28,0:28:68.89:0,69,564	0/0:25,0:26:61.53:0,62,482	0/0:17,0:17:44.94:0,45,369	0/0:16,1:17:9.92:0,10,283	0/0:9,0:9:20.94:0,21,168	0/0:22,0:22:47.52:0,48,379	0/0:13,0:13:29.89:0,30,239	0/0:26,0:28:75.96:0,76,599	1/1:3,20:23:7.86:494,8,0	0/0:25,0:27:69.94:0,70,545	0/0:30,0:30:46.91:0,47,578	0/0:8,0:9:16.96:0,17,123	0/0:19,0:19:53.92:0,54,443	0/0:15,0:16:34.97:0,35,272	0/0:8,0:8:11.97:0,12,99	0/0:21,1:23:31.97:0,32,431	0/0:24,0:25:70.95:0,71,571	0/0:20,0:19:44.92:0,45,367	0/0:17,0:17:32.90:0,33,267
chr10	85470010	.	CG	C	761.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.005;DP=596;FS=8.750;HRun=2;HaplotypeScore=57.9386;InbreedingCoeff=0.9240;MQ=81.31;MQ0=0;MQRankSum=-2.314;QD=30.46;ReadPosRankSum=0.636;VQSLOD=2.3601;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1681	0/0:5,0:5:15.05:0,15,225	0/0:15,0:15:42.09:0,42,580	0/0:19,0:19:51.16:0,51,723	0/0:20,0:20:60.16:0,60,870	0/0:20,0:20:60.20:0,60,897	0/0:29,0:29:84.25:0,84,1215	0/0:31,0:31:84.23:0,84,1195	0/0:27,0:27:78.26:0,78,1166	0/0:20,0:20:54.17:0,54,788	0/0:20,0:20:54.15:0,54,782	0/0:21,0:21:57.19:0,57,853	0/0:19,0:19:54.17:0,54,788	0/0:20,0:20:60.18:0,60,857	0/0:11,0:11:33.11:0,33,491	0/0:24,0:24:72.24:0,72,1077	0/0:30,0:30:81.27:0,81,1213	1/1:0,25:25:66.21:856,66,0	0/0:21,0:21:57.17:0,57,813	0/0:16,0:16:42.14:0,42,627	0/0:41,0:41:99:0,114,1705	0/0:12,0:12:36.11:0,36,519	0/0:7,0:7:18.06:0,18,269	0/0:23,0:23:69.23:0,69,1033	0/0:16,0:16:45.15:0,45,674	0/0:36,0:36:99:0,102,1464	0/0:26,0:26:78.26:0,78,1163	0/0:3,0:3:9.03:0,9,135
chr10	85471426	.	CGGTG	C	125.89	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=4.851;DP=500;FS=0.000;HRun=0;HaplotypeScore=95.1702;InbreedingCoeff=0.6245;MQ=74.20;MQ0=0;MQRankSum=-1.242;QD=8.99;ReadPosRankSum=-0.343;VQSLOD=2.6018;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,2847	0/0:6,0:6:15.05:0,15,422	0/0:14,0:14:30.35:0,30,841	0/1:8,0:8:37.91:38,0,324	0/0:20,0:20:60.19:0,60,1572	0/0:20,0:20:60.16:0,60,1648	0/0:20,0:20:60.21:0,60,1638	0/0:21,0:21:63.17:0,63,1739	0/0:19,0:19:57.20:0,57,1615	0/0:15,0:15:45.14:0,45,1092	0/0:9,0:9:27.09:0,27,735	0/0:18,0:18:54.19:0,54,1528	0/0:21,0:21:63.20:0,63,1720	0/0:20,0:20:60.19:0,60,1671	0/0:24,0:24:72.25:0,72,2030	0/0:15,0:15:45.14:0,45,1241	0/0:22,0:22:66.20:0,66,1780	1/1:0,4:6:14.98:190,15,0	0/0:16,0:16:48.16:0,48,1387	0/0:15,0:15:45.11:0,45,1146	0/0:48,0:48:99:0,144,4070	0/0:8,0:8:24.08:0,24,691	0/0:11,0:11:33.11:0,33,955	0/0:23,0:23:69.22:0,69,1876	0/0:17,0:17:51.18:0,51,1406	0/0:24,0:24:72.20:0,72,2002	0/0:14,0:14:42.14:0,42,1216	0/0:12,0:12:36.12:0,36,1018
chr10	85471431	.	AACGCTGCTACCACAACC	A	449.52	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.817;DP=478;FS=0.000;HRun=0;HaplotypeScore=223.1811;InbreedingCoeff=0.9422;MQ=75.04;MQ0=0;MQRankSum=-2.366;QD=112.38;ReadPosRankSum=1.119;VQSLOD=3.1265;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,7842	0/0:6,0:6:15.05:0,15,1182	0/0:14,0:14:18.66:0,19,1979	0/0:9,0:9:24.08:0,24,947	0/0:16,0:16:48.16:0,48,3975	0/0:20,0:20:60.21:0,60,4965	0/0:19,0:19:57.20:0,57,4837	0/0:19,0:19:57.18:0,57,3760	0/0:18,0:18:54.19:0,54,3887	0/0:13,0:13:39.13:0,39,2586	0/0:10,0:10:27.98:0,28,1875	0/0:16,0:16:48.16:0,48,3458	0/0:19,0:19:57.20:0,57,4671	0/0:18,0:18:54.19:0,54,3687	0/0:25,0:25:75.26:0,75,6265	0/0:13,0:13:39.13:0,39,3144	0/0:22,0:22:66.23:0,66,4974	1/1:0,4:4:12.04:535,12,0	0/0:17,0:17:51.17:0,51,3602	0/0:13,0:13:39.13:0,39,3064	0/0:47,0:47:99:0,141,11221	0/0:9,0:9:27.09:0,27,1820	0/0:12,0:12:36.12:0,36,2609	0/0:21,0:21:63.22:0,63,5183	0/0:14,0:14:39.13:0,39,3141	0/0:23,0:23:69.23:0,69,5404	0/0:14,0:14:42.14:0,42,3274	0/0:12,0:12:36.12:0,36,2778
chr10	85471816	.	C	CTCTG	3982.42	PASS	AB=0.736;AC=11;AF=0.196;AN=56;BaseQRankSum=-10.100;DP=703;FS=10.656;HRun=0;HaplotypeScore=126.2111;InbreedingCoeff=0.3524;MQ=64.69;MQ0=9;MQRankSum=-0.429;QD=20.32;ReadPosRankSum=1.037;VQSLOD=2.4945;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:43:21.32:0,21,159	0/0:8,0:8:21.04:0,21,306	0/0:34,0:25:15.04:0,15,209	0/0:28,0:26:14.86:0,15,211	0/0:22,0:22:30.10:0,30,464	0/0:21,0:22:42.07:0,42,566	0/0:10,0:21:14.39:0,14,101	1/1:29,0:28:15.04:249,15,0	0/0:32,0:33:57.14:0,57,848	0/0:28,0:28:33.10:0,33,500	0/0:12,0:12:15.05:0,15,232	0/0:29,0:31:45.13:0,45,659	0/0:21,0:21:42.12:0,42,635	0/0:18,0:18:42.14:0,42,661	0/0:22,0:22:30.06:0,30,445	0/0:30,0:30:57.19:0,57,898	0/0:37,0:37:60.19:0,60,924	0/1:12,0:11:21.81:54,0,22	0/1:13,4:15:29.28:322,0,29	0/1:9,11:21:20.27:543,0,20	0/1:28,26:53:93.91:880,0,94	0/0:19,0:19:33.98:0,34,491	0/0:17,0:17:30.04:0,30,419	0/0:41,0:42:63.14:0,63,923	0/0:19,0:19:24.06:0,24,354	1/1:15,16:32:6.80:1116,7,0	0/1:5,17:22:11.53:748,0,12	1/1:4,2:6:3.01:71,3,0
chr10	85472391	.	TCA	T	141.80	PASS	AB=0.850;AC=13;AF=0.500;AN=26;BaseQRankSum=1.858;DP=283;FS=0.000;HRun=0;HaplotypeScore=41.0990;InbreedingCoeff=0.4264;MQ=27.42;MQ0=128;MQRankSum=-1.216;QD=1.84;ReadPosRankSum=1.032;VQSLOD=1.2674;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:3,0:2:2.84:14,3,0	./.	./.	1/1:7,2:5:3.01:32,3,0	1/1:7,4:9:8.99:84,9,0	1/1:11,3:8:5.50:41,6,0	1/1:7,2:7:3.01:32,3,0	0/0:4,0:2:5.99:0,6,63	0/0:11,0:4:5.98:0,6,58	0/0:23,0:13:18:0,18,192	./.	1/1:10,1:7:3:32,3,0	0/1:14,3:14:19.68:20,0,117	0/0:13,0:7:8.99:0,9,106	0/0:9,0:1:2.99:0,3,23	./.	0/0:5,0:2:6.02:0,6,72
chr10	85473962	.	G	GA	341.29	PASS	AC=6;AF=0.273;AN=22;BaseQRankSum=-2.784;DP=347;FS=0.000;HRun=8;HaplotypeScore=37.5140;InbreedingCoeff=0.7523;MQ=16.63;MQ0=256;MQRankSum=0.487;QD=13.13;ReadPosRankSum=0.325;VQSLOD=2.1582;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,5:6:15.04:173,15,0	./.	./.	0/0:18,0:10:11.02:0,11,82	./.	./.	./.	./.	1/1:4,7:8:18.05:208,18,0	1/1:0,9:7:6.02:69,6,0	./.	./.	./.	./.	./.	./.	./.	./.	0/0:20,0:16:27:0,27,246	./.	0/0:14,0:7:6:0,6,54	0/0:11,0:8:3:0,3,28	./.	0/0:14,0:12:23.92:0,24,219	0/0:16,0:5:12:0,12,110	0/0:15,0:3:6:0,6,55	0/0:12,0:8:14.95:0,15,128
chr10	85474509	.	A	AT	700.16	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.829;DP=619;FS=0.805;HRun=7;HaplotypeScore=56.6585;InbreedingCoeff=0.9952;MQ=77.96;MQ0=0;MQRankSum=-1.135;QD=25.01;ReadPosRankSum=0.366;VQSLOD=3.9819;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.15:0,96,926	0/0:11,0:11:33.05:0,33,319	0/0:13,0:14:33:0,33,301	0/0:14,0:14:21.01:0,21,199	0/0:24,0:24:66.10:0,66,637	0/0:23,0:22:63.08:0,63,602	0/0:20,0:20:57.02:0,57,535	0/0:19,0:19:54.08:0,54,517	0/0:19,0:19:48.05:0,48,458	0/0:30,0:30:81.10:0,81,771	0/0:15,0:15:42.07:0,42,405	0/0:27,0:27:69.10:0,69,666	0/0:23,0:23:69.11:0,69,666	0/0:22,0:22:63.10:0,63,608	0/0:22,0:22:66.11:0,66,637	0/0:22,0:22:60.09:0,60,579	0/0:27,0:27:69.11:0,69,666	1/1:1,27:28:66.20:795,66,0	0/0:23,0:23:54.05:0,54,511	0/0:24,0:24:63.10:0,63,608	0/0:15,0:15:39.07:0,39,383	0/0:20,0:20:56.99:0,57,531	0/0:23,0:23:54.08:0,54,521	0/0:15,0:15:39.06:0,39,376	0/0:31,0:31:90.05:0,90,846	0/0:25,0:25:69.10:0,69,662	0/0:25,0:25:66.10:0,66,636	0/0:22,0:22:51.08:0,51,493
chr10	85474712	.	GC	G	7682.78	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.231;DP=689;FS=13.344;HRun=1;HaplotypeScore=72.1615;InbreedingCoeff=0.9998;MQ=95.28;MQ0=0;MQRankSum=-1.679;QD=38.22;ReadPosRankSum=-1.090;VQSLOD=3.6626;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,2177	0/0:9,0:9:27.09:0,27,431	0/0:34,0:34:99:0,99,1426	0/0:30,0:30:84.08:0,84,1225	0/0:27,0:27:81.28:0,81,1292	0/0:16,0:16:48.14:0,48,739	0/0:32,0:32:96.30:0,96,1487	1/1:0,29:29:84.24:1135,84,0	0/0:15,0:15:45.14:0,45,694	0/0:21,0:21:63.20:0,63,965	0/0:18,0:18:54.17:0,54,835	0/0:26,0:26:78.27:0,78,1239	0/0:25,0:25:75.26:0,75,1194	0/0:23,0:23:69.22:0,69,1076	1/1:0,20:20:48.16:671,48,0	1/1:0,25:25:69.23:964,69,0	0/0:32,0:32:93.24:0,93,1429	0/0:17,0:17:48.13:0,48,733	1/1:0,21:21:60.16:789,60,0	1/1:0,28:28:78.22:1064,78,0	1/1:0,18:18:45.15:629,45,0	0/0:27,0:27:78.27:0,78,1240	0/0:20,0:20:57.19:0,57,910	0/0:41,0:41:99:0,120,1854	0/0:27,0:27:81.21:0,81,1196	1/1:0,25:25:72.11:1005,72,0	1/1:0,23:23:66.22:922,66,0	1/1:0,12:12:36.12:503,36,0
chr10	85474985	.	AT	A	8094.72	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=16.878;DP=628;FS=1.412;HRun=10;HaplotypeScore=84.5350;InbreedingCoeff=0.9869;MQ=68.76;MQ0=0;MQRankSum=-2.819;QD=20.76;ReadPosRankSum=-0.094;VQSLOD=5.4284;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,41:47:99:912,105,0	1/1:3,10:13:29.99:260,30,0	0/0:9,0:9:9.01:0,9,88	0/0:7,0:7:12.01:0,12,119	0/0:24,0:24:69.19:0,69,763	0/0:21,0:21:57.15:0,57,631	1/1:3,16:19:44.99:391,45,0	1/1:0,19:19:53.99:469,54,0	0/0:26,0:26:75.19:0,75,815	1/1:2,23:25:65.97:573,66,0	1/1:1,9:10:23.02:188,23,0	0/0:21,0:21:63.14:0,63,680	0/0:22,0:22:60.12:0,60,643	0/0:25,0:25:69.19:0,69,763	1/1:2,21:23:56.99:495,57,0	1/1:5,20:25:26.80:462,27,0	1/1:0,21:21:62.99:547,63,0	1/1:5,20:25:47.96:417,48,0	1/1:7,22:29:65.98:573,66,0	1/1:1,21:22:59.97:521,60,0	1/1:3,28:31:71.98:625,72,0	0/0:22,0:22:60.16:0,60,664	0/0:17,0:17:51.12:0,51,554	0/0:20,0:21:48.43:0,48,513	0/0:23,0:23:63.17:0,63,697	1/1:6,23:29:68.97:596,69,0	1/1:2,23:25:68.97:599,69,0	1/1:8,19:27:53.99:469,54,0
chr10	85475185	.	GCGCGTA	G	1480.18	PASS	AB=0.795;AC=11;AF=0.196;AN=56;BaseQRankSum=4.974;DP=555;FS=1.079;HRun=0;HaplotypeScore=189.9066;InbreedingCoeff=0.5689;MQ=73.39;MQ0=5;MQRankSum=-3.732;QD=8.92;ReadPosRankSum=-2.451;VQSLOD=2.3284;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,7:34:46.22:421,46,0	0/1:3,4:7:3.96:4,0,12	0/0:24,0:8:3.01:0,3,13	0/1:40,0:25:6.33:6,0,329	0/0:31,0:31:84.29:0,84,2214	0/0:16,0:16:45.15:0,45,1358	0/1:18,9:27:56.66:243,0,57	0/0:14,0:14:18.84:0,19,254	0/0:21,0:21:57.20:0,57,1889	1/1:15,4:19:43.26:573,43,0	1/1:2,6:8:2.80:13,3,0	0/0:14,0:14:39.13:0,39,1221	0/0:9,0:9:22.51:0,23,647	0/0:15,0:15:45.15:0,45,1388	0/0:16,0:16:32.14:0,32,538	0/0:15,0:15:29.13:0,29,464	1/1:24,7:31:4.59:371,5,0	0/0:22,0:22:50.91:0,51,1212	0/0:21,0:20:48.61:0,49,728	0/0:9,0:9:18.06:0,18,254	0/0:22,0:21:27.16:0,27,368	0/0:9,0:9:27.09:0,27,840	0/0:25,0:25:60.21:0,60,1922	0/0:37,0:36:99:0,99,2980	0/0:15,0:15:39.13:0,39,1132	0/0:27,0:27:5.14:0,5,985	0/0:19,0:18:35.78:0,36,660	0/0:8,0:8:15.05:0,15,309
chr10	85475189	.	GTA	G	1442.71	PASS	AB=0.843;AC=13;AF=0.232;AN=56;BaseQRankSum=5.726;DP=539;FS=0.000;HRun=0;HaplotypeScore=159.7545;InbreedingCoeff=0.5947;MQ=73.71;MQ0=5;MQRankSum=-6.057;QD=8.91;ReadPosRankSum=-2.351;VQSLOD=3.0238;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,10:32:47.94:503,48,0	0/1:5,1:6:5.74:16,0,6	0/0:24,0:7:3.07:0,3,10	0/0:41,0:26:12.76:0,13,327	0/0:32,0:32:87.30:0,87,1585	0/0:17,0:17:48.15:0,48,918	1/1:15,13:28:2.13:213,2,0	0/1:10,4:14:40.58:41,0,106	0/0:20,0:20:60.21:0,60,1180	1/1:10,8:18:47.66:453,48,0	1/1:6,2:8:2.04:6,2,0	0/0:14,0:14:39.13:0,39,747	0/0:9,0:9:22.48:0,22,389	0/0:15,0:15:45.15:0,45,863	0/0:14,1:15:26.67:0,27,172	0/0:14,0:14:28.30:0,28,270	1/1:20,11:31:14.54:339,15,0	0/0:21,0:21:53.50:0,53,701	0/0:19,0:18:14.03:0,14,355	0/0:8,0:8:15.81:0,16,125	0/0:16,4:19:24.58:0,25,222	0/0:9,0:9:27.09:0,27,515	0/0:24,0:24:66.23:0,66,1283	0/0:36,0:35:99:0,99,1874	0/0:15,0:15:42.14:0,42,788	0/1:22,3:25:36.39:36,0,421	0/0:17,0:16:29.09:0,29,321	0/0:5,2:7:14.93:0,15,146
chr10	85475191	.	ACG	A	1181.81	PASS	AB=0.865;AC=17;AF=0.304;AN=56;BaseQRankSum=7.291;DP=547;FS=1.004;HRun=0;HaplotypeScore=163.8488;InbreedingCoeff=0.4977;MQ=73.29;MQ0=5;MQRankSum=-8.109;QD=6.29;ReadPosRankSum=-0.998;VQSLOD=3.3350;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:28.22:0,28,106	0/0:6,0:6:5.17:0,5,20	0/0:25,0:8:3:0,3,29	0/0:40,0:25:19.08:0,19,191	0/0:33,0:33:48.16:0,48,777	0/0:17,0:17:36.10:0,36,568	0/0:30,0:30:3.99:0,4,67	1/1:9,5:14:23.67:228,24,0	0/0:21,0:21:57.19:0,57,928	0/1:18,0:18:6.97:55,0,7	0/0:9,0:9:2.96:0,3,19	0/0:15,0:15:39.11:0,39,585	0/0:9,0:9:10.44:0,10,195	0/0:15,0:15:33.11:0,33,544	0/1:11,4:15:11.65:99,0,12	0/1:10,4:14:5.98:6,0,26	0/1:31,0:31:16.89:52,0,17	0/0:11,0:21:32.46:0,32,248	1/1:10,9:18:35.10:346,35,0	1/1:5,3:8:0.04:101,0,0	0/1:13,6:18:3.60:91,0,4	0/0:9,0:9:21.07:0,21,346	0/0:24,0:24:57.19:0,57,927	0/0:36,0:35:69.24:0,69,1139	0/0:15,0:15:33.11:0,33,544	1/1:25,1:26:15.40:217,15,0	1/1:14,3:16:24.96:127,25,0	1/1:7,0:7:10.47:41,10,0
chr10	85475196	.	C	CATGT	4811.02	PASS	AB=0.938;AC=18;AF=0.321;AN=56;BaseQRankSum=15.191;DP=619;FS=4.012;HRun=0;HaplotypeScore=202.7763;InbreedingCoeff=-0.2417;MQ=69.37;MQ0=5;MQRankSum=-14.232;QD=13.55;ReadPosRankSum=-2.136;VQSLOD=3.9124;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:37:99:432,0,124	1/1:7,0:7:3.48:46,3,0	0/0:27,0:9:4.89:0,5,32	0/0:38,0:23:4.09:0,4,235	0/0:33,0:33:84.29:0,84,1655	0/0:16,0:16:45.14:0,45,882	0/1:32,0:32:99:395,0,130	0/1:21,3:24:99:834,0,217	0/0:24,0:24:66.17:0,66,1273	0/1:21,2:23:99:931,0,187	1/1:8,1:9:2.94:18,3,0	0/0:19,0:19:45.15:0,45,889	0/0:11,0:11:30.54:0,31,538	0/0:15,0:15:42.13:0,42,836	0/1:19,2:23:29.26:155,0,29	0/1:19,1:21:42.52:91,0,43	0/1:35,2:37:99:461,0,219	0/1:24,0:25:99:158,0,478	0/1:25,0:24:99:251,0,390	0/1:13,0:13:8.84:9,0,137	0/1:23,4:26:53.48:53,0,68	0/0:10,0:10:27.09:0,27,539	0/0:22,0:22:60.21:0,60,1247	0/0:35,0:34:96.30:0,96,1898	0/0:14,0:14:42.14:0,42,856	0/1:24,1:25:99:614,0,107	0/1:18,0:17:58.53:277,0,59	0/1:7,2:9:45.30:86,0,45
chr10	85475202	.	C	CATGTGCGTGT	14476.79	PASS	AB=0.981;AC=26;AF=0.464;AN=56;BaseQRankSum=13.663;DP=612;FS=0.787;HRun=0;HaplotypeScore=220.1422;InbreedingCoeff=0.5620;MQ=71.50;MQ0=5;MQRankSum=-14.850;QD=42.70;ReadPosRankSum=1.074;VQSLOD=4.6223;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,9:27:31.17:1260,31,0	0/1:7,1:8:0.93:177,0,1	0/0:28,0:10:3.92:0,4,56	0/0:38,0:25:15.94:0,16,297	0/0:28,0:28:75.24:0,75,2045	0/0:16,0:16:45.01:0,45,1320	1/1:19,9:29:33.14:922,33,0	1/1:26,0:26:9.26:1660,9,0	0/0:23,0:23:66.23:0,66,2100	1/1:17,6:23:62.98:2123,63,0	1/1:6,1:7:3.01:110,3,0	0/0:24,0:24:72.18:0,72,1658	0/0:11,0:11:27.55:0,28,690	0/0:16,0:16:48.16:0,48,1409	1/1:25,0:25:8.21:700,8,0	0/1:21,0:21:32.66:282,0,33	1/1:26,7:33:51.10:1562,51,0	0/1:25,0:25:99:412,0,366	0/1:22,0:21:45.23:997,0,45	0/1:12,0:12:4.18:39,0,4	0/1:29,0:28:11.59:156,0,12	0/0:15,0:15:39.09:0,39,964	0/0:24,0:24:66.21:0,66,2024	0/0:33,0:32:93.27:0,93,2745	0/0:16,0:16:48.13:0,48,1327	1/1:16,8:27:47.17:2231,47,0	1/1:16,0:16:29.77:1236,30,0	1/1:9,0:9:18.02:608,18,0
chr10	85475204	.	C	CATGT	4525.88	PASS	AB=0.899;AC=23;AF=0.411;AN=56;BaseQRankSum=13.034;DP=619;FS=2.874;HRun=0;HaplotypeScore=190.2976;InbreedingCoeff=0.3481;MQ=74.17;MQ0=5;MQRankSum=-12.902;QD=13.23;ReadPosRankSum=3.273;VQSLOD=4.2001;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:32.94:270,33,0	0/1:8,0:8:15:15,0,47	0/0:31,0:13:10.26:0,10,115	0/0:40,0:26:18.72:0,19,244	0/0:27,0:27:75.22:0,75,1429	0/0:16,0:16:44.99:0,45,883	1/1:29,0:29:21.11:188,21,0	0/1:30,0:30:99:143,0,178	0/0:25,0:25:72.21:0,72,1392	0/1:23,0:23:19.21:189,0,19	1/1:7,0:7:2.97:51,3,0	0/0:27,0:27:78.24:0,78,1485	0/0:9,0:9:21.54:0,22,434	0/0:15,0:15:45.15:0,45,933	1/1:17,9:26:9.19:528,9,0	1/1:14,5:19:8.26:211,8,0	0/1:32,0:32:47.41:127,0,47	0/1:25,0:25:23.53:24,0,164	0/1:18,4:21:52.65:451,0,53	0/1:12,1:13:8.82:155,0,9	1/1:27,3:29:18.44:243,18,0	0/0:14,0:14:39.12:0,39,712	0/0:24,0:24:66.23:0,66,1326	0/0:32,0:31:87.30:0,87,1781	0/0:17,0:17:48.16:0,48,963	1/1:15,12:27:37.77:1088,38,0	0/1:6,9:15:0.21:575,0,0	0/1:5,4:9:6.47:268,0,6
chr10	85475206	.	C	CGTGTGCGT	13767.31	PASS	AB=0.952;AC=32;AF=0.571;AN=56;BaseQRankSum=15.786;DP=628;FS=9.837;HRun=0;HaplotypeScore=219.0385;InbreedingCoeff=0.8414;MQ=74.67;MQ0=5;MQRankSum=-14.145;QD=35.39;ReadPosRankSum=0.128;VQSLOD=3.3413;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:35.92:1109,36,0	1/1:8,0:8:4.93:293,5,0	0/0:31,0:14:18.69:0,19,260	0/1:38,0:26:10.83:11,0,153	0/0:28,0:28:77.82:0,78,1679	0/0:15,0:15:42.10:0,42,922	1/1:29,0:29:22.63:975,23,0	1/1:32,0:32:56.22:1272,56,0	0/0:26,0:26:78.17:0,78,1858	1/1:25,0:25:47.57:1692,48,0	1/1:6,0:6:6.02:189,6,0	0/0:26,0:26:78.22:0,78,1712	0/0:9,0:9:22.80:0,23,607	0/0:15,0:15:45.14:0,45,1178	1/1:17,9:26:14.63:829,15,0	1/1:15,4:19:21.16:533,21,0	1/1:32,0:32:55.35:1391,55,0	1/1:23,0:23:13.10:602,13,0	1/1:20,4:23:19.11:982,19,0	0/1:12,1:13:2.37:26,0,2	1/1:29,2:30:13.19:209,13,0	0/0:15,0:15:39.09:0,39,853	0/0:23,0:23:63.20:0,63,1687	0/0:34,0:33:93.20:0,93,2351	0/0:17,0:17:51.13:0,51,1188	1/1:17,10:28:22.59:1835,23,0	1/1:11,7:18:39.12:1219,39,0	1/1:5,4:9:21.05:602,21,0
chr10	85475208	.	T	TGTGCGTGTGCGTAC	24146.95	PASS	AB=0.973;AC=33;AF=0.589;AN=56;BaseQRankSum=6.581;DP=675;FS=7.009;HRun=0;HaplotypeScore=258.9759;InbreedingCoeff=0.9150;MQ=71.40;MQ0=4;MQRankSum=-13.845;QD=55.26;ReadPosRankSum=-0.233;VQSLOD=3.5549;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,10:50:27.09:1333,27,0	1/1:8,0:8:14.24:396,14,0	0/0:28,0:14:26.65:0,27,473	0/1:34,0:23:4.37:4,0,294	0/0:29,0:29:75.22:0,75,2353	0/0:15,0:15:42.09:0,42,1202	1/1:22,7:45:30.10:1221,30,0	1/1:33,0:33:87.26:3019,87,0	0/0:26,0:26:75.24:0,75,2598	1/1:26,0:26:66.18:2966,66,0	1/1:6,0:6:6.01:218,6,0	0/0:26,0:26:78.27:0,78,2426	0/0:9,0:9:24.08:0,24,888	0/0:16,0:16:45.14:0,45,1607	1/1:26,0:26:30.10:1393,30,0	1/1:19,0:19:15.05:785,15,0	1/1:35,1:36:72.22:2566,72,0	1/1:22,0:23:42.13:1456,42,0	1/1:27,0:26:69.21:2249,69,0	1/1:14,0:14:9.03:137,9,0	1/1:31,0:30:14.67:371,15,0	0/0:15,0:15:39.11:0,39,1172	0/0:23,0:23:63.20:0,63,2223	0/0:34,0:33:90.28:0,90,3182	0/0:17,0:17:45.15:0,45,1617	1/1:28,0:28:66:3139,66,0	1/1:20,0:20:45.12:1979,45,0	1/1:9,0:9:21.07:915,21,0
chr10	85477156	.	CCCCT	C	411.25	PASS	AB=0.818;AC=5;AF=0.089;AN=56;BaseQRankSum=7.936;DP=781;FS=3.816;HRun=0;HaplotypeScore=230.4436;InbreedingCoeff=-0.0973;MQ=57.34;MQ0=5;MQRankSum=-7.616;QD=3.32;ReadPosRankSum=-1.355;VQSLOD=2.5311;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,13:47:47.99:0,48,1963	0/1:9,7:16:65.80:66,0,647	0/0:35,0:17:37.46:0,37,982	0/0:51,0:34:70.67:0,71,1479	0/0:24,0:24:72.25:0,72,2050	0/0:22,0:22:66.23:0,66,1874	0/1:21,5:25:14.66:15,0,1084	0/0:42,0:42:99:0,120,3320	0/0:27,0:27:81.28:0,81,2334	0/1:31,6:37:99:179,0,2278	0/0:22,1:23:47.81:0,48,1286	0/0:26,0:26:78.27:0,78,2258	0/0:31,0:31:93.32:0,93,2595	0/0:13,0:13:39.13:0,39,1130	0/0:28,0:28:78.25:0,78,2024	0/0:22,0:22:45.14:0,45,1162	0/1:15,5:20:99:157,0,1018	0/1:22,3:25:99:112,0,1055	0/0:23,0:23:69.22:0,69,1839	0/0:28,0:28:66.15:0,66,1619	0/0:27,0:27:66.17:0,66,1788	0/0:23,0:23:69.24:0,69,1962	0/0:20,0:20:60.21:0,60,1734	0/0:31,0:31:87.25:0,87,2398	0/0:26,0:26:75.26:0,75,2173	0/0:36,0:36:99:0,108,2924	0/0:23,0:23:54.18:0,54,1478	0/0:27,0:27:81.28:0,81,2322
chr10	85477179	.	T	TA	1525.57	PASS	AB=0.731;AC=9;AF=0.161;AN=56;BaseQRankSum=10.180;DP=810;FS=6.046;HRun=0;HaplotypeScore=225.4126;InbreedingCoeff=0.3212;MQ=54.59;MQ0=11;MQRankSum=-7.308;QD=7.67;ReadPosRankSum=3.258;VQSLOD=2.9056;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,18:48:37.96:308,0,38	0/1:10,6:16:42.50:212,0,43	0/0:32,0:13:32.85:0,33,383	0/0:60,0:22:36.90:0,37,436	0/0:29,0:29:81.71:0,82,1096	0/0:22,0:22:66.21:0,66,908	1/1:18,11:28:19.23:202,19,0	0/0:38,0:38:94.69:0,95,1264	0/0:24,0:24:69.23:0,69,965	0/1:20,17:37:99:384,0,364	1/1:16,12:28:10.89:231,11,0	0/0:29,0:29:87.29:0,87,1215	0/0:37,0:37:99:0,108,1492	0/0:18,0:18:54.16:0,54,737	0/0:23,0:23:51.25:0,51,513	0/0:24,0:24:35.97:0,36,415	0/1:15,5:20:99:137,0,101	0/1:13,7:21:99:201,0,102	0/0:19,0:19:54.14:0,54,689	0/0:24,0:23:47.51:0,48,361	0/0:22,0:22:43.89:0,44,505	0/0:28,0:27:81.26:0,81,1118	0/0:26,0:26:78.24:0,78,1057	0/0:36,0:36:99:0,102,1424	0/0:27,0:27:81.14:0,81,1044	0/0:38,0:38:99:0,100,1363	0/0:27,0:27:48:0,48,559	0/0:26,0:26:78.17:0,78,1034
chr10	85477180	.	T	TC	1531.66	PASS	AB=0.724;AC=7;AF=0.125;AN=56;BaseQRankSum=11.337;DP=810;FS=3.711;HRun=0;HaplotypeScore=225.9742;InbreedingCoeff=0.0086;MQ=53.82;MQ0=11;MQRankSum=-7.937;QD=7.74;ReadPosRankSum=2.680;VQSLOD=3.7172;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,19:48:12.24:312,0,12	0/1:10,6:16:41.52:223,0,42	0/0:31,0:13:29.92:0,30,362	0/0:59,0:21:36.22:0,36,424	0/0:29,0:29:84.71:0,85,1121	0/0:22,0:22:66.21:0,66,906	0/1:18,11:28:0.38:195,0,0	0/0:38,0:38:66.66:0,67,1141	0/0:24,0:24:72.20:0,72,980	0/1:20,16:37:99:391,0,287	0/1:15,12:27:31.71:194,0,32	0/0:30,0:30:87.29:0,87,1216	0/0:37,0:37:99:0,111,1508	0/0:18,0:18:54.17:0,54,740	0/0:24,0:24:36.88:0,37,411	0/0:25,0:25:27.05:0,27,352	0/1:14,5:19:78.75:143,0,79	0/1:14,7:22:99:206,0,115	0/0:18,0:18:51.12:0,51,619	0/0:24,0:23:38.73:0,39,312	0/0:23,0:23:44.32:0,44,497	0/0:28,0:27:81.26:0,81,1108	0/0:26,0:26:78.24:0,78,1055	0/0:36,0:36:99:0,102,1425	0/0:27,0:27:78.15:0,78,1016	0/0:38,0:38:96.78:0,97,1293	0/0:26,0:26:41.97:0,42,489	0/0:26,0:26:75.20:0,75,1008
chr10	85477188	.	CTCTCTT	C	10719.40	PASS	AB=0.707;AC=24;AF=0.429;AN=56;BaseQRankSum=5.890;DP=790;FS=1.818;HRun=0;HaplotypeScore=251.1314;InbreedingCoeff=0.4105;MQ=51.63;MQ0=13;MQRankSum=-6.766;QD=25.10;ReadPosRankSum=0.415;VQSLOD=4.5580;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:32,15:47:99:128,0,378	0/1:6,9:15:99:358,0,264	0/0:31,0:13:30.02:0,30,545	0/0:53,0:18:11.55:0,12,431	0/0:30,0:30:88.15:0,88,2510	0/0:24,0:24:66.21:0,66,1840	0/1:15,13:27:99:231,0,167	0/1:9,23:32:99:1021,0,100	0/0:21,0:21:60.20:0,60,1732	0/1:20,17:37:99:1099,0,592	0/1:17,8:25:99:198,0,263	0/0:36,0:36:99:0,102,2983	0/0:35,0:35:99:0,99,3127	0/0:19,0:19:57.15:0,57,1804	1/1:6,19:25:38.16:738,38,0	1/1:1,26:27:24.08:499,24,0	0/1:10,7:17:99:233,0,125	0/1:20,4:24:99:507,0,194	1/1:12,5:17:45.07:718,45,0	1/1:1,24:24:18.06:333,18,0	1/1:17,6:23:25.92:534,26,0	0/0:26,0:25:72.24:0,72,2081	0/0:27,0:27:81.06:0,81,2042	0/0:38,0:38:99:0,102,3183	0/0:22,0:22:60.06:0,60,1493	1/1:0,37:37:99:2181,108,0	1/1:1,23:24:36.12:783,36,0	1/1:13,11:24:63.15:1159,63,0
chr10	85477190	.	CTCTT	C	3144.82	PASS	AB=0.988;AC=23;AF=0.411;AN=56;BaseQRankSum=10.922;DP=790;FS=6.832;HRun=0;HaplotypeScore=255.4714;InbreedingCoeff=0.3298;MQ=50.92;MQ0=14;MQRankSum=-8.263;QD=7.35;ReadPosRankSum=0.635;VQSLOD=1.7729;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:45,0:46:30.72:31,0,191	0/1:15,0:15:83.14:83,0,181	0/0:29,0:11:30.04:0,30,551	0/0:52,0:18:22.57:0,23,518	0/0:31,0:31:91.19:0,91,2214	0/0:23,0:23:66.22:0,66,1593	0/1:27,2:28:62.47:62,0,95	0/1:30,0:30:99:269,0,128	0/0:22,0:22:63.21:0,63,1574	0/1:38,2:40:99:444,0,439	0/1:25,0:25:34.05:34,0,174	0/0:35,0:35:99:0,102,2600	0/0:38,0:38:99:0,108,2751	0/0:19,0:19:57.15:0,57,1464	1/1:25,0:25:21.12:221,21,0	1/1:27,0:27:23.55:180,24,0	0/1:17,0:17:72.10:89,0,72	0/1:24,0:24:99:161,0,156	0/1:18,0:17:11.73:149,0,12	1/1:25,0:24:17.38:93,17,0	1/1:23,0:23:17.73:117,18,0	0/0:26,0:25:72.25:0,72,1817	0/0:27,0:27:81.08:0,81,1881	0/0:38,0:38:99:0,105,2709	0/0:21,0:21:60.11:0,60,1346	1/1:37,0:37:71.59:777,72,0	1/1:23,0:23:35.76:306,36,0	1/1:24,0:24:10.21:328,10,0
chr10	85477234	.	A	ATG	4483.54	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.530;DP=866;FS=5.062;HRun=0;HaplotypeScore=213.6479;InbreedingCoeff=0.9987;MQ=56.14;MQ0=8;MQRankSum=-1.721;QD=26.07;ReadPosRankSum=0.583;VQSLOD=5.1862;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,28:42:33.96:561,34,0	1/1:5,8:14:33.07:476,33,0	0/0:40,0:18:21.25:0,21,422	0/0:37,0:28:47.73:0,48,696	0/0:33,0:33:87.22:0,87,1064	0/0:23,0:23:51.16:0,51,643	1/1:11,26:38:52.47:886,52,0	0/0:44,0:42:99:0,111,1320	0/0:23,0:23:63.20:0,63,794	1/1:6,35:41:64.56:1548,65,0	1/1:1,16:19:36.12:597,36,0	0/0:38,0:39:96.08:0,96,1154	0/0:47,0:47:99:0,129,1563	0/0:18,0:18:48.15:0,48,604	0/0:39,0:39:86.26:0,86,1037	0/0:27,0:27:48.15:0,48,605	1/1:9,9:18:30.47:415,30,0	0/0:24,0:24:32:0,32,425	0/0:35,0:33:81.15:0,81,955	0/0:24,0:24:28.32:0,28,409	0/0:30,0:30:48.07:0,48,604	0/0:24,0:23:60.19:0,60,752	0/0:31,0:31:57.20:0,57,760	0/0:54,0:54:99:0,111,1365	0/0:22,0:22:42.11:0,42,514	0/0:41,0:40:96.24:0,96,1164	0/0:26,0:26:54.13:0,54,651	0/0:13,0:13:36.12:0,36,453
chr10	85477357	.	T	TTGTG	20754.31	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-3.785;DP=1031;FS=10.982;HRun=0;HaplotypeScore=178.9847;InbreedingCoeff=0.9821;MQ=62.86;MQ0=4;MQRankSum=-5.451;QD=36.67;ReadPosRankSum=-2.049;VQSLOD=4.0090;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:56,0:56:93.25:1990,93,0	1/1:16,0:17:18.06:352,18,0	0/0:63,0:41:22.92:0,23,589	0/0:62,0:37:42.40:0,42,523	0/0:47,0:47:99:0,102,1608	0/0:18,0:18:42.14:0,42,699	1/1:27,0:28:17.42:738,17,0	1/1:20,27:51:99:2147,102,0	0/0:36,0:38:84.24:0,84,1300	1/1:42,1:43:83.90:1819,84,0	1/1:27,0:28:34.68:801,35,0	0/0:40,0:42:99:0,99,1592	0/0:36,0:36:87.24:0,87,1388	0/0:26,0:26:57.19:0,57,949	1/1:10,27:42:62.68:1409,63,0	1/1:8,24:35:65.70:1503,66,0	1/1:30,0:29:49.70:1107,50,0	1/1:11,1:31:6.02:105,6,0	1/1:12,16:28:57.17:1317,57,0	1/1:8,19:27:56.91:1266,57,0	1/1:20,53:79:99:2863,123,0	0/0:25,0:27:66.22:0,66,1076	0/0:23,0:25:57.18:0,57,900	0/0:57,0:57:99:0,129,2181	0/0:20,0:23:44.43:0,44,827	1/1:9,22:32:71.97:1568,72,0	1/1:4,20:24:51.18:1251,51,0	1/1:5,8:13:21.07:516,21,0
chr10	85477375	.	G	GTGTC	18638.04	PASS	AB=0.996;AC=24;AF=0.429;AN=56;BaseQRankSum=5.819;DP=1016;FS=4.138;HRun=0;HaplotypeScore=180.9317;InbreedingCoeff=0.4143;MQ=61.72;MQ0=5;MQRankSum=-1.649;QD=34.71;ReadPosRankSum=7.398;VQSLOD=4.5995;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,49:59:99:2846,111,0	1/1:6,8:14:27.09:665,27,0	0/0:67,0:44:81.92:0,82,1165	0/0:70,0:44:70.35:0,70,1021	0/0:43,0:43:99:0,123,2082	0/0:21,0:21:63.05:0,63,998	1/1:6,19:31:44.95:1187,45,0	0/1:48,0:47:99:1181,0,241	0/0:38,0:39:99:0,114,1754	1/1:1,40:45:99:2776,123,0	1/1:1,19:25:48.06:1183,48,0	0/0:41,0:41:99:0,123,2078	0/0:39,0:39:99:0,114,1906	0/0:22,0:22:66.17:0,66,1203	0/1:42,0:42:99:864,0,109	0/1:33,0:33:24.71:841,0,25	1/1:1,28:32:63.11:1626,63,0	0/1:19,0:19:58.93:84,0,59	0/1:28,0:29:99:716,0,216	0/1:30,0:29:68.90:753,0,69	1/1:66,0:66:15.47:1803,15,0	0/0:26,0:26:78.11:0,78,1373	0/0:24,0:24:68.38:0,68,1160	0/0:59,0:60:99:0,171,2910	0/0:24,0:24:59.65:0,60,1060	0/1:28,0:28:24.68:931,0,25	0/1:26,0:26:55.47:813,0,55	1/1:9,0:9:21.07:369,21,0
chr10	85478757	.	C	CT	3510.27	PASS	AB=0.625;AC=19;AF=0.339;AN=56;BaseQRankSum=-0.292;DP=472;FS=0.414;HRun=9;HaplotypeScore=93.4501;InbreedingCoeff=0.8652;MQ=72.61;MQ0=4;MQRankSum=-6.787;QD=19.83;ReadPosRankSum=-1.175;VQSLOD=3.1684;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:50.99:0,51,439	0/0:10,0:10:26.99:0,27,233	0/0:26,0:15:16.65:0,17,194	0/0:19,0:11:19.78:0,20,154	0/0:20,0:21:53.02:0,53,449	0/0:15,0:15:41.97:0,42,360	0/0:14,0:14:32.97:0,33,280	1/1:20,16:37:11.74:546,12,0	0/0:15,0:15:38.99:0,39,338	0/0:14,0:14:35.97:0,36,310	0/0:14,0:15:44.02:0,44,367	0/0:16,0:16:32.99:0,33,286	0/0:20,0:20:50.82:0,51,426	0/0:13,0:13:32.99:0,33,285	1/1:2,10:12:36.07:378,36,0	1/1:1,11:12:33.05:347,33,0	0/0:30,0:31:64.91:0,65,546	1/1:6,14:20:39.07:418,39,0	1/1:11,5:15:2.07:253,2,0	0/1:8,12:20:9.99:329,0,10	1/1:5,3:8:5.92:65,6,0	0/0:17,0:17:44.96:0,45,386	0/0:11,0:12:32.03:0,32,266	0/0:7,0:7:17.99:0,18,156	0/0:12,0:12:29.97:0,30,260	1/1:9,10:19:16.06:399,16,0	1/1:8,20:28:37.42:613,37,0	1/1:0,5:5:15.04:163,15,0
chr10	85478769	.	AAGAG	A	4693.68	PASS	AB=0.938;AC=19;AF=0.339;AN=56;BaseQRankSum=-1.544;DP=528;FS=1.990;HRun=0;HaplotypeScore=123.9803;InbreedingCoeff=0.8928;MQ=64.99;MQ0=7;MQRankSum=4.140;QD=27.29;ReadPosRankSum=4.891;VQSLOD=4.6062;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,13:19:38.34:606,38,0	1/1:0,8:9:27.09:427,27,0	0/0:28,0:11:8.06:0,8,139	0/0:23,0:12:9.97:0,10,151	0/0:22,0:23:47.89:0,48,1030	0/0:19,0:20:47.90:0,48,1081	1/1:5,12:17:21.07:350,21,0	0/0:27,0:32:69.70:0,70,1322	0/0:17,0:17:45.15:0,45,1078	1/1:4,13:17:33.11:549,33,0	1/1:5,12:17:36.12:598,36,0	1/1:7,8:16:15.04:228,15,0	1/1:1,23:24:57.19:945,57,0	1/1:10,1:12:12.01:144,12,0	0/0:6,0:18:33.08:0,33,528	0/0:8,0:15:30.08:0,30,508	1/1:9,17:26:37.59:832,38,0	0/0:19,0:24:42.08:0,42,739	0/0:14,0:22:48.16:0,48,920	0/0:14,0:21:36.12:0,36,634	0/0:8,0:10:17.76:0,18,287	0/0:16,0:16:39.13:0,39,933	0/1:14,1:15:13.81:14,0,702	0/0:7,0:7:15.05:0,15,370	0/0:15,0:16:47.90:0,48,1012	0/0:20,0:27:66.22:0,66,1229	0/0:14,0:29:57.14:0,57,919	0/0:3,0:7:18.06:0,18,340
chr10	85480494	.	T	TC	4535.05	PASS	AB=0.805;AC=26;AF=0.464;AN=56;BaseQRankSum=-2.839;DP=528;FS=13.713;HRun=9;HaplotypeScore=56.7411;InbreedingCoeff=0.7324;MQ=83.31;MQ0=0;MQRankSum=0.275;QD=17.93;ReadPosRankSum=0.437;VQSLOD=3.6371;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:28:72.99:0,73,604	0/0:7,0:7:21:0,21,182	0/1:17,0:17:15.90:16,0,117	0/1:17,0:18:24.48:24,0,88	0/0:23,0:23:62.95:0,63,540	0/0:32,0:32:74.87:0,75,640	0/0:19,0:19:50.97:0,51,439	1/1:10,18:28:42.91:439,43,0	0/0:25,0:25:68.93:0,69,590	0/0:21,0:22:59.02:0,59,501	0/0:22,0:23:58.78:0,59,501	1/1:1,17:18:39.11:431,39,0	1/1:0,14:14:39.11:431,39,0	1/1:0,11:11:27.07:299,27,0	1/1:5,0:17:17.36:108,17,0	0/1:7,0:14:27.16:94,0,27	0/0:18,0:18:50.99:0,51,443	1/1:3,11:14:27.07:299,27,0	1/1:10,9:19:39.11:431,39,0	1/1:2,20:22:56.02:553,56,0	1/1:1,9:10:21.06:232,21,0	0/0:24,0:24:62.97:0,63,543	0/0:21,0:21:59.03:0,59,500	0/0:15,0:15:35.99:0,36,312	0/0:18,0:18:48.84:0,49,410	0/1:5,15:20:4.01:399,0,4	1/1:1,20:22:50.97:545,51,0	1/1:0,8:8:21.06:232,21,0
chr10	85481938	.	T	TAGGG	31873.97	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-8.831;DP=658;FS=0.987;HRun=0;HaplotypeScore=96.8674;InbreedingCoeff=0.9994;MQ=84.28;MQ0=0;MQRankSum=-7.231;QD=72.11;ReadPosRankSum=0.841;VQSLOD=6.9776;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:29:72.25:2013,72,0	1/1:0,11:12:33.07:844,33,0	0/0:27,0:27:75.26:0,75,1452	0/0:18,0:18:28.81:0,29,916	0/0:34,0:34:99:0,99,1917	0/0:25,0:25:75.26:0,75,1495	1/1:0,12:13:36.12:960,36,0	1/1:11,32:46:99:3523,135,0	0/0:29,0:29:87.30:0,87,1738	1/1:3,31:36:99:2796,105,0	1/1:2,24:27:72.25:2010,72,0	1/1:5,17:23:54.18:1423,54,0	1/1:4,20:25:63.17:1654,63,0	1/1:1,17:18:45.15:1214,45,0	1/1:1,20:21:57.20:1584,57,0	1/1:0,12:12:33.11:923,33,0	1/1:3,15:18:42.14:1127,42,0	1/1:2,19:23:57.20:1593,57,0	1/1:4,14:20:60.19:1547,60,0	1/1:1,33:34:96.17:2489,96,0	1/1:1,14:15:36.12:963,36,0	0/0:27,0:27:81.25:0,81,1537	0/0:25,0:25:75.26:0,75,1475	0/0:10,0:10:24.08:0,24,479	0/0:21,0:21:63.18:0,63,1185	1/1:3,21:28:84.25:2137,84,0	1/1:4,22:26:69.24:1838,69,0	1/1:0,14:15:45.15:1235,45,0
chr10	85484505	.	AAC	A	439.35	PASS	AB=0.867;AC=13;AF=0.250;AN=52;BaseQRankSum=-2.122;DP=577;FS=0.000;HRun=0;HaplotypeScore=93.9900;InbreedingCoeff=0.4035;MQ=71.21;MQ0=3;MQRankSum=1.783;QD=2.66;ReadPosRankSum=1.652;VQSLOD=1.6638;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:8.98:0,9,74	0/0:10,0:9:9.46:0,9,86	./.	./.	1/1:12,5:16:2.79:32,3,0	1/1:14,0:16:5.84:46,6,0	0/0:20,0:32:8.98:0,9,73	0/0:24,0:23:5.92:0,6,39	0/1:17,3:20:52.59:53,0,70	0/0:22,0:22:35.35:0,35,271	0/0:16,0:16:2.99:0,3,24	0/0:20,0:19:9.44:0,9,72	0/0:8,0:17:2.73:0,3,26	0/0:14,0:14:17.93:0,18,155	0/0:21,0:21:23.91:0,24,207	0/0:27,0:27:38.59:0,39,374	0/0:18,0:18:2.97:0,3,20	0/1:27,0:25:3.28:3,0,212	0/0:19,0:19:14.86:0,15,123	0/0:8,0:8:5.75:0,6,47	0/0:15,0:27:6:0,6,53	0/1:12,7:19:26.32:117,0,26	1/1:14,4:18:5.63:64,6,0	1/1:24,12:36:23.85:239,24,0	1/1:8,4:12:3.01:32,3,0	0/0:21,0:21:38.82:0,39,314	0/0:13,0:22:11.20:0,11,82	0/0:9,0:9:9.01:0,9,102
chr10	85485657	.	A	AAC	3485.04	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.608;DP=896;FS=3.375;HRun=0;HaplotypeScore=116.2905;InbreedingCoeff=0.9991;MQ=67.50;MQ0=2;MQRankSum=-1.493;QD=36.30;ReadPosRankSum=0.232;VQSLOD=5.7925;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,115,1543	0/0:10,0:10:30.09:0,30,369	0/0:44,0:37:65.32:0,65,673	0/0:37,0:29:27.35:0,27,343	0/0:23,0:23:60.18:0,60,726	0/0:22,0:22:51.14:0,51,614	0/0:39,0:38:78.21:0,78,932	0/0:39,0:39:80.68:0,81,906	0/0:33,0:33:84.24:0,84,1009	0/0:36,0:36:96.30:0,96,1182	0/0:19,0:19:57.15:0,57,674	1/1:5,33:38:81.28:1321,81,0	1/1:4,23:27:29.34:991,29,0	1/1:12,19:31:73.99:1173,74,0	0/0:44,0:44:99:0,120,1452	0/0:38,0:37:87.25:0,87,1055	0/0:38,0:40:99:0,104,1234	0/0:28,0:28:63.17:0,63,750	0/0:30,0:30:78.22:0,78,930	0/0:16,0:16:36.11:0,36,443	0/0:58,0:59:99:0,126,1522	0/0:28,0:28:81.25:0,81,997	0/0:16,0:17:41.95:0,42,482	0/0:72,0:72:99:0,192,2329	0/0:19,0:19:45.14:0,45,554	0/0:28,0:28:69.18:0,69,813	0/0:14,0:14:36.09:0,36,420	0/0:11,0:11:33.09:0,33,394
chr10	85485739	.	T	TAC	3761.24	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.899;DP=1042;FS=7.152;HRun=0;HaplotypeScore=126.7371;InbreedingCoeff=0.9734;MQ=55.05;MQ0=38;MQRankSum=-0.751;QD=35.82;ReadPosRankSum=0.604;VQSLOD=5.2548;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:62:99:0,135,1621	0/0:16,0:16:31.16:0,31,476	0/0:69,0:8:8.94:0,9,88	0/0:54,0:7:14.96:0,15,131	0/0:30,0:30:75.21:0,75,908	0/0:36,0:36:84.27:0,84,1048	0/0:39,0:39:96.26:0,96,1154	0/0:42,0:41:90.27:0,90,1103	0/0:27,0:27:57.17:0,57,698	0/0:34,0:33:78.66:0,79,885	0/0:22,0:22:56.62:0,57,688	1/1:20,18:38:50.34:1217,50,0	1/1:11,20:32:81.25:1279,81,0	1/1:4,30:33:78.27:1265,78,0	0/0:39,0:39:78.05:0,78,957	0/0:35,0:34:93.25:0,93,1112	0/0:39,0:39:84.11:0,84,1029	0/0:31,0:31:68.44:0,68,804	0/0:25,0:23:32.96:0,33,608	0/0:28,0:28:69.16:0,69,843	0/0:84,0:81:99:0,191,2317	0/0:34,0:33:80.62:0,81,981	0/0:16,0:16:48.15:0,48,599	0/0:62,0:61:99:0,129,1516	0/0:23,0:24:59.35:0,59,733	0/0:28,0:28:66.21:0,66,824	0/0:31,0:31:84.19:0,84,1015	0/0:24,0:24:64.23:0,64,793
chr10	85488262	.	C	CGAG	865.26	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.195;DP=493;FS=5.778;HRun=0;HaplotypeScore=83.3612;InbreedingCoeff=0.9925;MQ=79.69;MQ0=0;MQRankSum=-1.543;QD=54.08;ReadPosRankSum=1.298;VQSLOD=5.8820;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.24:0,84,1477	0/0:7,0:7:21.07:0,21,392	0/0:18,0:17:45.15:0,45,817	0/0:14,0:13:32.88:0,33,538	0/0:15,0:15:36.12:0,36,663	0/0:26,0:26:72.25:0,72,1337	0/0:19,0:19:54.18:0,54,981	0/0:23,0:23:69.23:0,69,1248	0/0:16,0:16:48.16:0,48,895	0/0:18,0:18:54.19:0,54,1006	0/0:8,0:8:24.08:0,24,443	0/0:14,0:14:39.12:0,39,696	0/0:16,0:16:48.16:0,48,895	0/0:19,0:19:54.17:0,54,976	0/0:17,0:17:51.17:0,51,951	0/0:18,0:18:54.19:0,54,1007	0/0:31,0:31:93.32:0,93,1715	1/1:1,15:16:39.13:960,39,0	0/0:22,0:22:57.19:0,57,1036	0/0:15,0:15:45.15:0,45,834	0/0:23,0:23:66.23:0,66,1214	0/0:11,0:11:33.11:0,33,615	0/0:11,0:11:30.10:0,30,559	0/0:14,0:14:36.12:0,36,661	0/0:16,0:16:48.16:0,48,895	0/0:22,0:22:66.23:0,66,1231	0/0:21,0:21:60.19:0,60,1086	0/0:14,0:14:42.14:0,42,783
chr10	85488358	.	GGAGAGAGGGAGAGAGAGAGAGAGAGAGAGA	G	1025.44	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=-0.018;DP=373;FS=6.434;HRun=0;HaplotypeScore=221.3179;InbreedingCoeff=0.5952;MQ=64.12;MQ0=13;MQRankSum=0.623;QD=8.14;ReadPosRankSum=0.731;VQSLOD=1.9560;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:23.99:244,24,0	1/1:3,0:3:8.97:124,9,0	0/0:11,0:6:3.89:0,4,61	0/1:25,0:9:14.38:14,0,36	0/0:8,0:8:6.02:0,6,333	0/0:18,0:18:36.56:0,37,1840	./.	0/0:16,0:16:38.39:0,38,1739	0/0:13,0:13:35.76:0,36,2971	1/1:1,9:10:22.26:381,22,0	1/1:5,0:8:5.99:50,6,0	0/0:15,0:15:30.50:0,31,1760	0/0:3,0:3:9.02:0,9,626	0/0:14,0:12:27.06:0,27,1583	0/0:13,0:13:33.06:0,33,2892	0/0:11,0:11:33.08:0,33,2125	1/1:3,26:29:6.02:364,6,0	0/1:17,0:17:2.81:3,0,1696	0/0:23,0:20:51.06:0,51,4055	0/0:7,0:6:17.95:0,18,407	0/0:9,0:9:9.03:0,9,549	0/0:13,0:13:36.08:0,36,2581	0/0:7,0:6:9.03:0,9,778	0/0:20,0:19:45.12:0,45,3888	0/0:6,0:6:10.75:0,11,1042	0/1:16,0:16:7.78:8,0,2178	0/0:23,0:23:60.10:0,60,4496	0/0:14,0:12:12.04:0,12,1122
chr10	85488366	.	GGA	G	140.59	PASS	AB=0.943;AC=13;AF=0.295;AN=44;BaseQRankSum=1.806;DP=372;FS=5.508;HRun=0;HaplotypeScore=66.7104;InbreedingCoeff=0.0919;MQ=57.52;MQ0=16;MQRankSum=1.028;QD=0.94;ReadPosRankSum=0.711;VQSLOD=0.7848;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:8,0:3:0:0,0,0	0/0:23,0:6:0:0,0,0	./.	0/1:14,5:18:1.96:27,0,2	./.	0/0:20,0:20:5.98:0,6,55	0/0:13,0:13:17.42:0,17,227	1/1:9,0:9:2.84:14,3,0	./.	1/1:8,6:14:5.89:65,6,0	1/1:3,0:3:2.97:20,3,0	0/1:11,1:10:26.48:26,0,37	0/1:16,0:16:37.92:38,0,225	0/1:10,0:10:13.90:14,0,167	0/1:28,0:28:8.20:8,0,13	0/0:17,0:17:5.08:0,5,31	0/0:27,0:24:29.74:0,30,284	0/0:8,0:7:2.74:0,3,12	0/0:10,0:10:6.91:0,7,80	0/0:12,0:12:18.06:0,18,251	./.	0/0:17,0:16:18.05:0,18,246	0/0:7,0:7:9.03:0,9,119	0/1:14,2:16:20.54:21,0,94	0/1:23,0:23:35.99:36,0,264	0/0:16,0:14:9.75:0,10,95
chr10	85488370	.	A	AGAGG	896.41	PASS	AB=0.962;AC=9;AF=0.167;AN=54;BaseQRankSum=-2.320;DP=378;FS=14.120;HRun=0;HaplotypeScore=78.7807;InbreedingCoeff=-0.2418;MQ=55.52;MQ0=17;MQRankSum=-0.195;QD=5.82;ReadPosRankSum=0.150;VQSLOD=0.8155;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:17.97:0,18,147	0/0:3,0:3:5.99:0,6,50	0/0:7,0:3:2.62:0,3,26	0/0:23,0:5:5.93:0,6,40	0/0:8,0:8:8.99:0,9,74	0/0:22,0:21:37.73:0,38,318	./.	0/1:26,0:26:99:101,0,115	0/0:11,0:11:28:0,28,347	0/0:9,0:9:11.98:0,12,102	0/0:9,0:7:3:0,3,25	0/0:13,0:13:20.68:0,21,191	0/0:3,0:3:9:0,9,93	0/0:11,0:9:23.98:0,24,240	0/1:15,0:15:67.61:68,0,157	0/1:9,0:9:50.13:50,0,174	0/0:28,0:28:5.88:0,6,44	0/0:17,0:17:20.55:0,21,246	0/1:26,0:23:42.27:267,0,42	0/1:11,0:9:31.80:86,0,32	0/1:12,0:12:7.14:7,0,156	0/0:12,0:12:33.06:0,33,451	0/0:8,0:7:8.99:0,9,74	0/0:17,0:16:44.97:0,45,497	0/0:7,0:7:10.96:0,11,191	0/1:16,0:16:99:143,0,159	0/1:22,0:22:99:236,0,146	0/1:8,8:15:18.51:72,0,19
chr10	85488514	.	G	GATTT	2141.57	PASS	AB=0.882;AC=20;AF=0.417;AN=48;BaseQRankSum=-3.938;DP=323;FS=1.689;HRun=0;HaplotypeScore=52.1934;InbreedingCoeff=0.5076;MQ=64.44;MQ0=0;MQRankSum=-1.472;QD=12.98;ReadPosRankSum=0.539;VQSLOD=2.9099;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:24:0,24,280	0/0:5,0:5:2.98:0,3,21	./.	./.	0/0:10,0:10:3.01:0,3,47	0/0:22,0:22:30.10:0,30,466	1/1:2,0:3:3.01:52,3,0	0/1:43,0:43:2.61:322,0,3	0/0:7,0:7:9.02:0,9,120	0/0:11,0:11:15.05:0,15,234	0/0:10,0:10:3.01:0,3,47	0/0:2,0:4:6.01:0,6,56	0/0:1,0:3:3:0,3,28	0/0:4,0:7:6.01:0,6,56	1/1:5,0:5:3.01:49,3,0	1/1:11,0:11:3.01:52,3,0	0/0:38,0:38:66.17:0,66,954	1/1:4,13:17:30.10:708,30,0	1/1:13,2:14:6.02:142,6,0	1/1:10,3:13:9.03:197,9,0	1/1:0,1:1:3.01:71,3,0	./.	0/0:5,0:5:6.02:0,6,94	./.	0/0:8,0:8:6.02:0,6,94	0/1:9,4:13:31.79:214,0,32	1/1:11,4:18:6.02:142,6,0	1/1:20,5:25:15.05:354,15,0
chr10	85489290	.	GGAGAGA	G	1851.73	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.701;DP=546;FS=4.524;HRun=0;HaplotypeScore=127.5001;InbreedingCoeff=0.9807;MQ=73.94;MQ0=2;MQRankSum=-7.870;QD=42.08;ReadPosRankSum=2.078;VQSLOD=3.5803;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:72.23:0,72,2326	0/0:6,0:6:15.05:0,15,467	0/0:50,0:35:55.60:0,56,1986	0/0:43,0:35:56.77:0,57,1699	0/0:17,0:17:42.14:0,42,1374	0/0:16,0:17:45.15:0,45,1443	0/0:19,0:19:57.20:0,57,1834	0/0:32,0:32:81.27:0,81,2466	0/0:17,0:18:51.17:0,51,1650	0/0:21,0:21:51.18:0,51,1699	0/0:19,0:18:43.97:0,44,1461	1/1:0,13:13:33.11:731,33,0	1/1:5,15:20:30.10:665,30,0	1/1:1,10:11:27.09:598,27,0	0/0:11,0:11:30.10:0,30,1006	0/0:15,0:16:39.13:0,39,1270	0/0:10,0:13:24.08:0,24,693	0/0:10,0:10:27.09:0,27,909	0/0:16,0:16:45.15:0,45,1475	0/0:20,0:20:51.18:0,51,1743	0/0:11,0:12:30.10:0,30,954	0/0:9,0:9:12.04:0,12,410	0/0:11,0:11:24.08:0,24,811	0/0:32,0:31:75.20:0,75,2304	0/0:14,0:14:39.13:0,39,1277	0/0:21,0:21:51.13:0,51,1590	0/0:14,0:15:42.14:0,42,1353	0/0:20,0:20:45.15:0,45,1444
chr10	85489384	.	TCACACA	T	970.43	PASS	AC=28;AF=0.636;AN=44;BaseQRankSum=-1.913;DP=382;FS=5.839;HRun=0;HaplotypeScore=78.6813;InbreedingCoeff=0.5857;MQ=67.23;MQ0=5;MQRankSum=-1.792;QD=5.36;ReadPosRankSum=1.584;VQSLOD=1.0728;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,1:27:12.85:110,13,0	1/1:4,4:8:9.46:141,9,0	./.	./.	0/0:14,0:14:9.03:0,9,125	0/0:11,0:11:6.91:0,7,190	1/1:16,0:15:0.47:1,0,0	0/0:21,0:19:4.28:0,4,20	0/0:11,0:12:6:0,6,157	1/1:7,0:7:5.99:83,6,0	./.	1/1:11,1:12:6:84,6,0	1/1:9,1:10:3.01:60,3,0	1/1:8,0:8:3.01:60,3,0	1/1:10,3:13:5.98:80,6,0	1/1:8,0:9:3.01:42,3,0	1/1:22,0:22:11.58:257,12,0	./.	./.	1/1:9,5:14:6.46:82,6,0	1/1:15,0:15:2.03:6,2,0	0/0:13,0:13:9.03:0,9,212	0/0:5,0:7:6.02:0,6,141	0/0:27,0:24:24.08:0,24,592	0/0:5,0:5:6.02:0,6,131	./.	1/1:13,0:13:6:56,6,0	1/1:4,2:3:3.01:60,3,0
chr10	85490420	.	T	TAA	5472.11	PASS	AB=0.900;AC=19;AF=0.339;AN=56;BaseQRankSum=-9.596;DP=507;FS=1.236;HRun=10;HaplotypeScore=60.1179;InbreedingCoeff=0.9277;MQ=74.89;MQ0=0;MQRankSum=0.517;QD=29.26;ReadPosRankSum=-1.324;VQSLOD=4.7093;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.11:0,51,518	0/0:7,0:7:18.03:0,18,177	0/0:12,0:13:16.67:0,17,157	0/1:7,0:9:7.03:7,0,59	0/0:43,0:44:99:0,120,1201	0/0:32,0:33:89.91:0,90,897	0/0:16,0:17:41.82:0,42,409	1/1:11,19:30:51.64:750,52,0	0/0:13,0:13:30.05:0,30,305	0/0:17,0:17:45.08:0,45,453	0/0:21,0:21:54.08:0,54,542	0/0:10,0:10:27.06:0,27,275	0/0:16,0:17:44.83:0,45,439	0/0:20,0:21:50.78:0,51,486	1/1:1,13:14:24.08:358,24,0	1/1:1,14:19:46.40:591,46,0	0/0:23,0:23:66.14:0,66,671	0/0:1,0:8:19.20:0,19,83	1/1:2,9:12:32.28:412,32,0	1/1:4,22:27:62.70:889,63,0	1/1:0,13:14:30.10:447,30,0	0/0:12,0:12:33.07:0,33,336	0/0:21,0:21:57.12:0,57,579	0/0:9,0:9:27.06:0,27,275	0/0:15,0:15:42.09:0,42,427	1/1:5,15:21:26.06:654,26,0	1/1:5,19:24:20.69:685,21,0	1/1:1,15:17:47.65:679,48,0
chr10	85490623	.	CT	C	1891.65	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-4.537;DP=511;FS=0.000;HRun=11;HaplotypeScore=77.7855;InbreedingCoeff=0.8494;MQ=69.67;MQ0=2;MQRankSum=0.674;QD=15.38;ReadPosRankSum=1.930;VQSLOD=4.2533;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,11:18:12.93:272,13,0	1/1:0,7:8:23.01:178,23,0	0/0:8,0:7:3:0,3,26	0/1:10,0:10:10.13:10,0,70	0/0:27,0:28:78.01:0,78,801	0/0:19,1:21:29.30:0,29,491	1/1:2,12:14:31.77:252,32,0	0/0:5,0:26:65.80:0,66,347	0/0:11,0:11:33.08:0,33,352	1/1:4,18:22:53.91:443,54,0	1/1:6,20:27:65.88:535,66,0	0/0:1,0:12:19.92:0,20,100	0/0:1,0:22:42.61:0,43,214	0/0:2,0:13:19.89:0,20,100	0/0:1,0:9:8.52:0,9,43	0/0:2,0:24:48.48:0,48,253	1/1:6,18:24:22.23:387,22,0	0/0:9,0:27:51.19:0,51,279	0/0:6,0:21:40.10:0,40,217	0/0:5,0:28:72.07:0,72,413	0/0:1,0:12:22.73:0,23,114	0/0:18,1:19:23.46:0,23,442	0/0:18,1:19:14.43:0,14,344	0/0:13,0:13:14.45:0,14,345	0/0:17,1:18:23.48:0,23,455	0/0:1,1:20:29.34:0,29,233	0/0:2,0:26:56.93:0,57,290	0/0:6,0:10:28.80:0,29,168
chr10	85490969	.	AG	A	3500.05	PASS	AB=0.962;AC=19;AF=0.339;AN=56;BaseQRankSum=4.097;DP=562;FS=2.225;HRun=10;HaplotypeScore=68.1140;InbreedingCoeff=0.8393;MQ=83.86;MQ0=0;MQRankSum=0.678;QD=17.77;ReadPosRankSum=3.173;VQSLOD=4.4250;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:19:41.03:345,41,0	1/1:2,8:10:23.99:208,24,0	0/1:24,1:24:67.86:68,0,135	0/0:18,0:18:32.55:0,33,295	0/0:21,3:24:2.04:0,2,474	0/0:29,0:29:75.18:0,75,820	1/1:4,18:22:31.37:420,31,0	0/0:25,0:25:36.04:0,36,369	0/0:22,1:23:37.13:0,37,620	1/1:9,14:23:14.77:349,15,0	1/1:1,16:17:44.98:390,45,0	0/0:4,0:11:2.84:0,3,14	0/0:7,0:18:14.27:0,14,71	0/0:8,0:15:8.81:0,9,60	1/1:7,23:30:65.97:573,66,0	1/1:3,19:22:50.98:443,51,0	1/1:0,18:18:53.99:469,54,0	1/1:1,10:11:27.47:235,27,0	0/0:11,0:15:20.35:0,20,143	0/0:9,0:15:17.32:0,17,130	0/0:11,0:20:25.89:0,26,156	0/0:16,2:18:10.04:0,10,329	0/0:24,0:24:17.84:0,18,596	0/0:25,2:27:17.73:0,18,622	0/0:11,0:11:24.06:0,24,265	0/0:28,1:29:60.14:0,60,648	0/0:6,0:22:40.09:0,40,247	0/0:21,0:21:48.05:0,48,491
chr10	85491329	.	A	AT	2861.14	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-8.508;DP=497;FS=0.000;HRun=8;HaplotypeScore=83.6655;InbreedingCoeff=0.9627;MQ=73.19;MQ0=0;MQRankSum=-0.261;QD=28.05;ReadPosRankSum=0.815;VQSLOD=3.7245;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:69.21:831,69,0	1/1:1,9:10:27.08:322,27,0	0/0:15,1:15:23.62:0,24,214	0/0:13,0:13:3.26:0,3,108	0/0:19,0:19:51.03:0,51,482	0/0:24,0:24:66.10:0,66,636	1/1:0,13:13:33.10:399,33,0	0/0:23,0:23:60.08:0,60,575	0/0:14,0:14:39.05:0,39,372	1/1:3,19:22:57.17:688,57,0	1/1:1,16:17:48.11:555,48,0	0/0:7,0:7:18.03:0,18,174	0/0:20,0:20:45.06:0,45,434	0/0:12,0:12:27.04:0,27,260	0/0:15,0:15:39.34:0,39,356	0/0:10,0:10:24.03:0,24,232	1/1:2,11:12:21.06:253,21,0	0/0:20,0:20:59.84:0,60,561	0/0:35,0:35:86.48:0,86,814	0/0:23,0:23:57.09:0,57,550	0/0:16,0:16:32.72:0,33,300	0/0:15,0:15:42.06:0,42,405	0/0:13,0:13:38.79:0,39,354	0/0:13,0:13:32.54:0,33,299	0/0:20,0:20:51.08:0,51,492	0/0:27,0:27:74.99:0,75,710	0/0:21,0:21:60.07:0,60,569	0/0:19,0:19:38.80:0,39,360
chr10	85491352	.	G	GT	4317.77	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=3.300;DP=482;FS=0.911;HRun=9;HaplotypeScore=79.7605;InbreedingCoeff=0.9799;MQ=67.03;MQ0=1;MQRankSum=-0.729;QD=25.85;ReadPosRankSum=-0.797;VQSLOD=4.9564;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:53.51:0,54,468	0/0:10,0:10:17.95:0,18,149	0/0:22,0:19:38.79:0,39,312	0/0:20,0:14:31.80:0,32,265	0/0:15,1:16:8.80:0,9,305	0/0:25,0:25:59.97:0,60,521	0/0:16,0:16:35.99:0,36,312	1/1:5,16:21:45.07:467,45,0	0/0:13,0:13:24.87:0,25,210	0/0:20,0:20:38.97:0,39,338	0/0:18,0:18:35.97:0,36,312	0/0:6,0:6:15:0,15,130	0/0:15,0:15:41.98:0,42,364	0/0:8,0:8:21:0,21,182	1/1:4,9:13:24.06:265,24,0	1/1:0,9:9:27.07:299,27,0	0/0:11,0:10:26.99:0,27,234	0/0:21,0:21:50.99:0,51,443	1/1:12,23:35:72.15:783,72,0	1/1:4,13:17:42.10:456,42,0	1/1:2,11:13:33.09:365,33,0	0/0:19,0:19:47.96:0,48,413	0/0:18,0:18:13.07:0,13,286	0/0:12,0:12:17.97:0,18,156	0/0:17,0:18:50.02:0,50,422	1/1:3,23:26:69.17:754,69,0	1/1:1,13:14:36.10:398,36,0	1/1:1,18:19:47.77:530,48,0
chr10	85491371	.	GGTGT	G	803.51	PASS	AB=0.955;AC=23;AF=0.442;AN=52;BaseQRankSum=4.714;DP=486;FS=35.097;HRun=0;HaplotypeScore=113.0103;InbreedingCoeff=0.3335;MQ=57.05;MQ0=21;MQRankSum=-1.939;QD=3.11;ReadPosRankSum=-3.504;VQSLOD=-0.5977;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:21:6.01:56,6,0	1/1:8,0:8:6.01:56,6,0	./.	0/0:26,0:13:0.47:0,0,1	0/0:18,0:18:17.45:0,17,332	0/0:26,0:27:23.82:0,24,444	1/1:14,0:14:3:28,3,0	0/0:17,0:14:3.85:0,4,22	0/0:10,0:10:5.75:0,6,82	1/1:12,0:15:9.01:84,9,0	1/1:13,0:14:6.01:56,6,0	0/0:6,0:6:6.01:0,6,95	0/0:16,0:16:1.17:0,1,125	0/0:11,0:11:3.01:0,3,48	0/0:11,0:10:15.52:0,16,278	0/1:11,0:11:15.04:15,0,74	1/1:12,0:11:3:28,3,0	0/1:22,4:26:26.71:27,0,140	1/1:28,0:28:6.01:63,6,0	./.	1/1:22,1:22:13.86:190,14,0	0/0:20,0:20:12.03:0,12,197	0/0:19,0:20:32.83:0,33,636	0/0:12,0:11:14.68:0,15,233	0/1:18,2:19:34.55:35,0,192	1/1:22,0:23:6.29:74,6,0	0/1:15,0:15:13.46:51,0,13	0/1:22,0:21:11.03:209,0,11
chr10	85492222	.	A	AG	1120.04	PASS	AB=0.952;AC=8;AF=0.143;AN=56;BaseQRankSum=-2.573;DP=599;FS=2.672;HRun=7;HaplotypeScore=65.2857;InbreedingCoeff=0.7151;MQ=77.12;MQ0=1;MQRankSum=-0.183;QD=9.11;ReadPosRankSum=1.320;VQSLOD=0.9806;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,103,1006	0/0:6,0:6:18.02:0,18,169	0/1:29,0:21:9.69:10,0,196	0/0:21,1:18:32.58:0,33,238	0/0:28,0:28:69.48:0,69,660	0/0:21,0:21:39.15:0,39,405	0/0:27,0:27:71.88:0,72,660	0/1:34,3:38:17.85:18,0,487	0/0:19,0:19:45.07:0,45,434	0/0:26,0:26:66.09:0,66,632	0/0:18,0:18:41.92:0,42,378	1/1:2,11:13:27.08:320,27,0	1/1:0,24:24:48.15:569,48,0	1/1:3,16:19:30.09:356,30,0	0/0:23,0:23:57.04:0,57,533	0/0:16,0:16:44.90:0,45,405	0/0:27,0:27:72.05:0,72,670	0/0:21,0:21:56.83:0,57,506	0/0:11,0:11:30.02:0,30,278	0/0:14,0:14:32.99:0,33,304	0/0:26,0:26:41.84:0,42,566	0/0:25,0:25:65.96:0,66,612	0/0:16,0:16:30.03:0,30,283	0/0:18,0:18:47.95:0,48,444	0/0:16,0:16:30.02:0,30,284	0/0:18,0:18:51.03:0,51,470	0/0:29,0:28:75.15:0,75,743	0/0:6,0:6:15.02:0,15,140
chr10	85493568	.	CT	C	1492.38	PASS	AB=0.588;AC=16;AF=0.286;AN=56;BaseQRankSum=3.360;DP=470;FS=6.081;HRun=13;HaplotypeScore=54.9865;InbreedingCoeff=0.7628;MQ=64.43;MQ0=8;MQRankSum=0.000;QD=11.05;ReadPosRankSum=1.828;VQSLOD=3.1898;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:27:24.14:0,24,500	0/0:9,0:9:17.77:0,18,158	0/0:32,0:13:15.77:0,16,120	0/0:20,0:9:2.81:0,3,21	0/0:24,2:25:0.33:0,0,344	0/0:18,0:18:39.03:0,39,364	0/0:9,0:9:24.04:0,24,232	1/1:12,12:25:13.40:242,13,0	0/0:14,0:14:32.98:0,33,301	0/0:26,0:28:44.88:0,45,410	0/0:22,1:23:23.32:0,23,387	0/0:4,0:10:20.89:0,21,107	0/0:3,0:9:10.99:0,11,53	0/0:2,0:7:5.68:0,6,28	0/1:3,6:10:3.30:133,0,3	1/1:0,6:6:14.91:109,15,0	0/0:18,0:20:47.91:0,48,451	0/0:5,0:29:25.64:0,26,171	1/1:4,9:11:26.81:193,27,0	1/1:4,5:9:14.88:109,15,0	1/1:4,2:5:2.97:22,3,0	0/0:11,0:11:20.53:0,21,161	0/0:9,0:9:16.07:0,16,118	0/0:16,0:16:35.71:0,36,344	0/0:17,0:17:20.14:0,20,341	1/1:4,21:25:57.72:405,58,0	1/1:16,14:30:30.11:338,30,0	0/1:3,7:10:0.32:129,0,0
chr10	85494066	.	T	TC	7264.10	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-16.055;DP=707;FS=4.200;HRun=4;HaplotypeScore=69.1585;InbreedingCoeff=0.9951;MQ=98.59;MQ0=0;MQRankSum=-7.811;QD=35.09;ReadPosRankSum=1.995;VQSLOD=5.5910;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,159,1767	0/0:12,0:12:33.09:0,33,374	0/0:41,0:41:99:0,102,1082	0/0:34,0:34:90.17:0,90,966	0/0:12,0:12:36.10:0,36,408	0/0:22,0:22:65.97:0,66,699	0/0:31,0:31:90.21:0,90,990	1/1:3,19:22:57.15:737,57,0	0/0:25,0:25:72.14:0,72,791	0/0:24,0:24:65.55:0,66,713	0/0:16,0:16:45.13:0,45,508	0/0:33,0:33:93.25:0,93,1044	0/0:20,0:20:60.12:0,60,644	0/0:35,0:35:96.22:0,96,1056	1/1:2,27:29:75.25:1025,75,0	1/1:1,26:27:69.23:943,69,0	0/0:23,0:23:66.16:0,66,735	0/0:26,0:26:65.10:0,65,806	1/1:2,25:27:75.24:1007,75,0	1/1:1,13:14:36.12:489,36,0	1/1:4,36:40:81.66:1345,82,0	0/0:20,0:20:54.15:0,54,609	0/0:16,0:16:48.13:0,48,538	0/0:38,0:37:99:0,108,1189	0/0:16,0:16:45.11:0,45,493	1/1:2,18:20:54.18:733,54,0	1/1:0,21:21:60.20:820,60,0	1/1:0,7:7:12.04:164,12,0
chr10	85494457	.	TC	T	207.22	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.616;DP=552;FS=0.000;HRun=9;HaplotypeScore=64.5607;InbreedingCoeff=0.9548;MQ=79.80;MQ0=2;MQRankSum=0.642;QD=12.95;ReadPosRankSum=-0.545;VQSLOD=3.0735;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:54.05:0,54,548	0/0:6,0:6:15.01:0,15,144	0/0:27,0:21:25.66:0,26,257	0/0:26,0:19:18.26:0,18,299	0/0:23,0:23:66.04:0,66,671	0/0:23,0:23:62.83:0,63,643	0/0:20,0:20:47.66:0,48,510	0/0:21,0:25:36.06:0,36,374	0/0:13,0:13:36.08:0,36,395	0/0:15,0:15:36.09:0,36,405	0/0:13,0:13:29.93:0,30,307	0/0:18,0:18:40.62:0,41,386	0/0:14,0:14:38.94:0,39,368	0/0:26,0:27:77.93:0,78,788	0/0:19,0:19:48.14:0,48,553	0/0:24,0:24:66.14:0,66,710	0/0:42,0:42:99:0,105,1147	1/1:3,13:16:33.01:302,33,0	0/0:13,0:14:20.99:0,21,200	0/0:15,0:15:33.10:0,33,380	0/0:14,0:14:30.06:0,30,326	0/0:19,0:19:48.06:0,48,484	0/0:14,0:14:33.06:0,33,366	0/0:21,0:21:48.13:0,48,545	0/0:18,0:18:42.03:0,42,421	0/0:29,0:29:72.07:0,72,762	0/0:25,0:25:75.13:0,75,811	0/0:7,0:7:15.04:0,15,173
chr10	85494991	.	ATG	A	282.07	PASS	AB=0.958;AC=19;AF=0.413;AN=46;BaseQRankSum=4.052;DP=536;FS=3.633;HRun=0;HaplotypeScore=71.1859;InbreedingCoeff=0.4767;MQ=67.86;MQ0=2;MQRankSum=1.794;QD=1.32;ReadPosRankSum=1.560;VQSLOD=0.8144;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,6:28:3.01:32,3,0	1/1:9,0:10:2.84:14,3,0	./.	./.	0/1:21,2:23:16.96:17,0,121	0/0:26,0:27:17.99:0,18,180	1/1:19,3:23:14.70:124,15,0	./.	0/0:21,0:21:6.02:0,6,87	1/1:19,1:20:3.01:32,3,0	1/1:10,0:10:2.22:7,2,0	0/0:18,0:21:8.93:0,9,89	0/0:18,0:18:18.03:0,18,213	0/0:8,0:8:6.01:0,6,67	0/0:17,0:17:9.03:0,9,130	0/1:20,1:21:13.93:14,0,167	1/1:19,1:21:5.85:46,6,0	./.	0/0:10,0:10:3.90:0,4,45	0/0:18,0:18:18:0,18,182	0/0:26,0:26:14.97:0,15,135	0/1:14,0:14:5.29:5,0,196	1/1:16,2:18:8.22:71,8,0	1/1:25,0:25:8.76:76,9,0	0/0:16,0:16:12.03:0,12,155	0/0:19,0:19:19.28:0,19,216	0/0:16,0:19:9:0,9,94	./.
chr10	85496352	.	C	CGTT	7122.50	PASS	AB=0.700;AC=17;AF=0.304;AN=56;BaseQRankSum=-12.083;DP=690;FS=5.373;HRun=0;HaplotypeScore=92.6569;InbreedingCoeff=0.9250;MQ=69.45;MQ0=3;MQRankSum=-0.365;QD=33.44;ReadPosRankSum=-0.565;VQSLOD=4.7695;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:81.21:0,81,1099	0/0:15,0:15:30.10:0,30,420	0/0:34,0:26:25.83:0,26,256	0/0:34,0:26:21.06:0,21,272	0/0:30,0:30:78.25:0,78,1065	0/0:18,0:18:54.17:0,54,731	0/0:29,0:29:57.16:0,57,746	0/1:16,12:28:2.90:600,0,3	0/0:16,0:16:42.13:0,42,566	0/0:25,0:25:66.16:0,66,874	0/0:19,0:19:48.13:0,48,649	0/0:34,0:34:90.28:0,90,1240	0/0:30,0:30:72.07:0,72,912	0/0:29,0:29:69.18:0,69,937	1/1:3,17:22:48.16:937,48,0	1/1:5,22:27:54.18:1079,54,0	0/0:25,0:25:41.67:0,42,499	0/0:24,0:24:54.04:0,54,701	1/1:18,8:27:35.46:610,35,0	1/1:3,14:17:36.12:719,36,0	1/1:8,21:29:9.18:917,9,0	0/0:18,0:18:36.12:0,36,504	0/0:12,0:12:27:0,27,353	0/0:32,0:32:78.26:0,78,1090	0/0:19,0:19:51.16:0,51,693	1/1:2,11:14:32.74:568,33,0	1/1:10,19:31:9.19:912,9,0	1/1:2,16:18:39.13:780,39,0
chr10	85496697	.	G	GT	598.45	PASS	AB=0.939;AC=14;AF=0.368;AN=38;BaseQRankSum=-1.442;DP=267;FS=10.661;HRun=8;HaplotypeScore=109.2349;InbreedingCoeff=0.0641;MQ=84.80;MQ0=2;MQRankSum=-2.596;QD=3.42;ReadPosRankSum=-2.509;VQSLOD=-0.6343;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:2.92:0,3,18	0/1:8,0:8:1.59:2,0,41	0/1:43,1:29:27.68:28,0,110	0/1:34,0:20:16.53:17,0,91	0/0:15,0:15:9.04:0,9,115	0/0:6,0:6:5.84:0,6,33	./.	./.	0/0:3,0:3:5.81:0,6,31	0/0:18,0:18:30.58:0,31,164	0/1:22,1:23:14.70:15,0,199	./.	./.	./.	./.	0/0:1,0:1:2.74:0,3,12	0/0:6,0:6:5.58:0,6,26	./.	./.	1/1:15,11:26:32.23:425,32,0	0/1:1,0:1:0:0,0,0	0/0:20,0:20:26.26:0,26,204	0/1:14,0:14:11.34:11,0,56	./.	0/1:12,0:12:2.80:3,0,112	0/1:2,4:6:10.63:119,0,11	1/1:1,2:3:3.01:34,3,0	1/1:1,2:3:6.02:69,6,0
chr10	85498393	.	GT	G	2045.78	PASS	AB=0.756;AC=30;AF=0.536;AN=56;BaseQRankSum=3.892;DP=373;FS=15.144;HRun=13;HaplotypeScore=48.1841;InbreedingCoeff=0.2454;MQ=83.68;MQ0=4;MQRankSum=-2.166;QD=8.09;ReadPosRankSum=1.018;VQSLOD=0.7612;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:7,12:21:22.51:115,0,23	1/1:0,2:2:5.97:44,6,0	0/0:34,0:20:8.13:0,8,121	0/1:31,0:19:26.64:35,0,27	0/1:9,2:12:10.51:11,0,198	0/0:8,1:10:7.96:0,8,218	1/1:2,8:10:20.86:153,21,0	0/1:9,22:31:19.44:348,0,19	0/0:9,0:9:14.82:0,15,122	1/1:3,7:10:0.40:130,0,0	1/1:1,5:6:17.86:127,18,0	0/0:11,0:11:21.02:0,21,199	0/0:14,0:14:10.96:0,11,244	0/1:9,1:11:1.05:1,0,129	1/1:3,3:6:8.92:64,9,0	1/1:2,4:7:13.93:93,14,0	1/1:4,17:22:43.78:312,44,0	0/0:21,0:23:37.44:0,37,444	1/1:3,7:11:22.90:158,23,0	0/1:5,5:10:8.79:102,0,9	0/1:2,7:9:8.29:110,0,8	0/0:5,0:5:12.02:0,12,117	0/1:11,2:13:10.73:11,0,230	0/1:9,1:10:9.96:10,0,100	0/0:12,1:14:5.01:0,5,193	1/1:3,8:11:23.82:173,24,0	0/1:4,11:16:8.79:145,0,9	1/1:0,4:4:11.93:88,12,0
chr10	85498489	.	GTA	G	876.72	PASS	AB=1.000;AC=15;AF=0.375;AN=40;BaseQRankSum=3.077;DP=202;FS=2.912;HRun=0;HaplotypeScore=68.5955;InbreedingCoeff=0.3590;MQ=37.59;MQ0=7;MQRankSum=-3.825;QD=7.37;ReadPosRankSum=-1.749;VQSLOD=2.3407;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/1:3,0:3:0:0,0,0	./.	0/0:10,0:3:8.88:0,9,76	0/0:3,0:3:6.01:0,6,72	0/0:9,0:9:6.53:0,7,169	0/0:5,0:5:6.02:0,6,96	1/1:32,1:30:31.50:237,32,0	0/0:5,0:5:12.38:0,12,159	1/1:5,7:12:32.94:355,33,0	./.	0/0:2,0:2:5.99:0,6,49	./.	./.	1/1:2,0:2:5.99:50,6,0	./.	1/1:13,11:24:23.69:219,24,0	0/0:18,0:18:22.97:0,23,422	0/1:6,0:6:23.50:23,0,31	1/1:7,0:7:8.96:70,9,0	0/0:2,0:2:1.82:0,2,5	./.	0/0:1,0:1:3:0,3,26	./.	0/0:5,0:5:9.03:0,9,149	0/1:9,0:8:21.41:21,0,24	0/1:11,0:11:8.31:8,0,34	0/1:12,0:12:16.85:36,0,17
chr10	85498519	.	GTATGTATGTA	G	1288.77	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=3.058;DP=269;FS=2.020;HRun=0;HaplotypeScore=94.9829;InbreedingCoeff=0.6342;MQ=54.59;MQ0=4;MQRankSum=-4.795;QD=29.97;ReadPosRankSum=0.226;VQSLOD=3.2868;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,5:5:3.01:52,3,0	0/0:11,0:2:1.72:0,2,4	0/0:13,0:7:5.75:0,6,43	0/0:10,0:10:27.09:0,27,1007	0/0:9,0:9:21.07:0,21,945	1/1:3,0:5:2.51:23,3,0	0/0:36,0:35:90.24:0,90,1698	0/0:9,0:9:27.09:0,27,1218	1/1:7,4:11:14.43:606,14,0	./.	0/0:4,0:4:12.04:0,12,549	0/0:3,0:3:6.02:0,6,289	0/0:5,0:5:6.02:0,6,150	0/0:6,0:6:17.78:0,18,340	0/0:4,0:4:6.02:0,6,153	1/1:10,12:22:29.73:741,30,0	0/0:19,0:19:54.14:0,54,2222	0/0:6,0:6:18.06:0,18,282	0/0:11,0:11:15.05:0,15,283	0/0:4,0:4:3.01:0,3,56	0/0:2,0:2:6.02:0,6,209	0/0:1,0:1:3.01:0,3,75	0/0:4,0:4:12.04:0,12,378	0/0:9,0:9:24.08:0,24,991	0/0:13,0:12:33.11:0,33,554	0/0:18,0:18:39.13:0,39,684	0/0:12,0:11:27.09:0,27,512
chr10	85498527	.	GTATA	G	3041.16	PASS	AB=1.000;AC=16;AF=0.296;AN=54;BaseQRankSum=2.208;DP=285;FS=23.651;HRun=0;HaplotypeScore=65.6929;InbreedingCoeff=0.6278;MQ=58.80;MQ0=5;MQRankSum=-3.952;QD=22.87;ReadPosRankSum=1.491;VQSLOD=1.4971;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:7.39:0,7,33	0/0:5,0:5:2.60:0,3,10	0/0:16,0:5:5.81:0,6,61	0/0:20,0:9:8.47:0,8,47	0/0:10,0:10:27.08:0,27,572	0/0:10,0:10:21.06:0,21,487	0/0:3,0:3:0:0,0,0	1/1:19,11:29:66.18:1008,66,0	0/0:9,0:9:27.09:0,27,688	0/1:11,0:11:12.99:72,0,13	./.	0/0:4,0:4:12.04:0,12,281	0/0:3,0:3:6.02:0,6,154	0/0:5,0:5:6.02:0,6,122	0/0:0,0:6:16.79:0,17,77	0/0:1,0:4:5.60:0,6,26	0/1:25,0:25:57.48:104,0,57	0/0:19,0:19:51.08:0,51,1102	1/1:5,0:5:11.97:160,12,0	1/1:0,11:11:15.05:265,15,0	1/1:0,6:6:3.01:53,3,0	0/0:2,0:2:6.02:0,6,128	0/0:6,0:6:14.99:0,15,148	0/0:4,0:4:12.04:0,12,235	0/0:11,0:11:27.07:0,27,579	1/1:7,7:13:33.04:515,33,0	1/1:11,7:18:36.11:570,36,0	1/1:1,12:12:27.09:476,27,0
chr10	85499528	.	TA	T	4021.53	PASS	AB=0.875;AC=31;AF=0.554;AN=56;BaseQRankSum=7.470;DP=411;FS=2.144;HRun=12;HaplotypeScore=43.9810;InbreedingCoeff=0.8968;MQ=65.54;MQ0=21;MQRankSum=-1.303;QD=15.71;ReadPosRankSum=1.661;VQSLOD=4.4541;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:28:59.74:460,60,0	1/1:0,7:7:20.92:163,21,0	0/0:20,0:12:29.26:0,29,218	0/0:13,0:7:8.98:0,9,81	0/0:22,1:24:30.69:0,31,471	0/0:18,0:18:48.07:0,48,473	1/1:1,0:5:10.19:29,10,0	1/1:7,20:23:32.22:424,32,0	0/1:6,1:7:5.18:5,0,134	1/1:7,15:21:17.40:309,17,0	1/1:2,16:18:44.55:336,45,0	0/0:12,0:13:29.89:0,30,288	0/0:4,0:4:9.02:0,9,91	0/0:7,0:7:18.03:0,18,181	1/1:1,10:11:26.90:209,27,0	1/1:4,3:6:11.93:89,12,0	1/1:0,24:24:53.75:413,54,0	0/0:18,2:18:21.69:0,22,386	1/1:6,15:20:32.11:331,32,0	1/1:2,10:12:29.88:232,30,0	1/1:0,3:3:8.97:70,9,0	0/0:3,0:3:9.02:0,9,91	0/0:8,0:8:21.03:0,21,207	0/0:11,0:9:27.05:0,27,274	0/0:14,0:14:33.07:0,33,335	1/1:2,17:19:47.77:368,48,0	1/1:7,19:23:47.56:371,48,0	1/1:5,11:12:28.93:215,29,0
chr10	85499775	.	GGATAGATA	G	4190.99	PASS	AB=0.926;AC=17;AF=0.304;AN=56;BaseQRankSum=7.992;DP=664;FS=1.001;HRun=0;HaplotypeScore=173.2631;InbreedingCoeff=0.6925;MQ=54.58;MQ0=5;MQRankSum=-6.584;QD=16.70;ReadPosRankSum=-0.956;VQSLOD=2.9679;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:29:17.03:17,0,383	0/0:3,0:7:15.52:0,16,337	0/0:23,0:19:3.01:0,3,55	0/0:16,0:11:3.48:0,3,58	0/0:28,0:28:48.16:0,48,1771	0/0:32,0:34:63.18:0,63,2078	0/0:22,0:22:24.08:0,24,498	0/1:25,10:34:1.87:432,0,2	0/0:26,0:26:40.36:0,40,2220	0/0:37,0:40:72.23:0,72,2588	0/0:20,0:20:30.10:0,30,1163	0/0:19,0:24:33.10:0,33,828	0/0:9,0:22:30.07:0,30,874	0/0:15,0:40:63.21:0,63,2017	1/1:9,0:28:32.78:495,33,0	1/1:4,0:17:32.70:456,33,0	0/1:7,0:22:35.69:36,0,905	0/0:16,0:16:33.02:0,33,852	1/1:15,11:24:35.93:624,36,0	1/1:12,12:24:14.98:296,15,0	0/0:8,14:22:0:0,0,0	0/0:17,0:18:36.11:0,36,1115	0/0:16,0:16:27.09:0,27,962	0/0:17,0:17:32.98:0,33,1294	0/0:22,0:22:42.14:0,42,1687	1/1:13,19:32:31.18:1200,31,0	1/1:13,20:34:21.07:484,21,0	1/1:0,3:3:6.02:152,6,0
chr10	85499958	.	CTG	C	8790.97	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.689;DP=657;FS=7.100;HRun=0;HaplotypeScore=83.4331;InbreedingCoeff=0.9972;MQ=90.84;MQ0=2;MQRankSum=-1.738;QD=38.39;ReadPosRankSum=0.668;VQSLOD=6.7188;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1800	0/0:8,0:8:18.06:0,18,330	0/0:23,0:23:57.19:0,57,1016	0/0:29,0:30:69.09:0,69,1104	0/0:21,0:21:56.75:0,57,1055	0/0:24,0:24:66.23:0,66,1224	0/0:20,0:20:54.19:0,54,1004	1/1:1,44:45:99:1879,129,0	0/0:32,0:32:96.33:0,96,1787	0/0:26,0:26:75.26:0,75,1403	0/0:10,0:10:30.09:0,30,530	0/0:17,0:17:48.16:0,48,899	0/0:23,0:23:63.22:0,63,1180	0/0:26,0:26:75.24:0,75,1373	1/1:2,30:32:75.25:1104,75,0	1/1:1,17:18:39.13:573,39,0	0/0:24,0:24:72.25:0,72,1347	0/0:11,0:11:30.10:0,30,562	1/1:0,19:18:54.16:768,54,0	1/1:0,20:20:50.65:726,51,0	1/1:1,34:34:90.30:1325,90,0	0/0:26,0:26:78.27:0,78,1442	0/0:26,0:26:75.24:0,75,1352	0/0:29,0:29:87.28:0,87,1597	0/0:19,0:19:57.20:0,57,1068	1/1:1,24:25:19.04:1002,19,0	1/1:0,27:27:72.24:1060,72,0	1/1:0,8:8:24.08:353,24,0
chr10	85500929	.	AG	A	1887.56	PASS	AB=1.000;AC=31;AF=0.596;AN=52;BaseQRankSum=0.300;DP=258;FS=3.737;HRun=4;HaplotypeScore=35.6169;InbreedingCoeff=0.6121;MQ=72.36;MQ0=17;MQRankSum=-0.863;QD=11.80;ReadPosRankSum=-0.844;VQSLOD=0.8815;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,6:11:24.04:261,24,0	./.	0/1:43,0:12:9.78:10,0,109	0/0:54,1:16:6.43:0,6,171	0/0:5,0:5:12.04:0,12,168	0/0:3,0:1:3.01:0,3,42	1/1:5,6:11:25.82:272,26,0	1/1:8,4:12:26.06:265,26,0	0/0:7,0:6:15.05:0,15,209	1/1:3,1:4:9.02:97,9,0	1/1:2,5:6:3.01:36,3,0	1/1:1,3:4:5.85:71,6,0	1/1:4,3:7:14.44:165,14,0	1/1:4,4:8:12.03:142,12,0	./.	1/1:2,4:6:9.03:108,9,0	1/1:3,5:8:17.71:179,18,0	0/0:2,0:2:6.02:0,6,78	1/1:3,7:7:18.02:197,18,0	1/1:2,4:6:3:28,3,0	1/1:6,3:7:5.01:101,5,0	0/0:3,0:3:6.02:0,6,83	0/0:9,0:8:18.05:0,18,247	0/0:5,0:5:9.03:0,9,126	0/0:3,0:3:6.02:0,6,84	1/1:3,4:8:0.43:96,0,0	1/1:3,1:4:3.01:36,3,0	0/0:1,0:1:0:0,0,0
chr10	85500938	.	GGAGA	G	389.93	PASS	AB=1.000;AC=11;AF=0.239;AN=46;BaseQRankSum=0.394;DP=219;FS=1.369;HRun=0;HaplotypeScore=44.8965;InbreedingCoeff=0.3959;MQ=81.40;MQ0=13;MQRankSum=-1.520;QD=10.83;ReadPosRankSum=0.718;VQSLOD=2.3984;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:16.21:0,16,219	./.	0/0:36,0:11:19.97:0,20,263	0/0:47,0:15:14.06:0,14,159	0/0:5,0:5:3.01:0,3,77	0/0:4,0:2:6.02:0,6,115	0/0:11,0:11:21.04:0,21,338	1/1:3,8:11:18.05:280,18,0	0/0:4,0:4:9.03:0,9,186	0/0:2,0:2:5.98:0,6,80	./.	0/0:4,0:4:2.89:0,3,46	0/0:5,0:5:9.03:0,9,160	0/0:7,0:7:18.06:0,18,324	0/1:3,0:3:0.01:0,0,0	0/1:4,0:4:6.29:17,0,6	0/0:6,0:6:3.80:0,4,74	./.	1/1:6,1:5:3.01:53,3,0	./.	./.	0/0:2,0:2:3.01:0,3,74	0/0:9,0:8:6.02:0,6,154	0/0:7,0:7:15.01:0,15,294	0/0:2,0:2:2.99:0,3,23	0/1:6,0:6:42.80:43,0,44	1/1:0,4:4:6.02:109,6,0	1/1:1,0:1:2.96:19,3,0
chr10	85500943	.	GAGA	G	194.67	PASS	AB=0.895;AC=15;AF=0.300;AN=50;BaseQRankSum=1.850;DP=191;FS=2.966;HRun=0;HaplotypeScore=42.9049;InbreedingCoeff=0.2525;MQ=86.19;MQ0=12;MQRankSum=-1.604;QD=2.40;ReadPosRankSum=0.118;VQSLOD=1.1821;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:14.37:0,14,167	./.	0/0:32,0:10:13.95:0,14,245	0/1:38,0:16:5.14:5,0,114	0/0:5,0:5:9.03:0,9,151	0/0:4,0:3:9.02:0,9,144	0/0:11,0:11:21.07:0,21,338	1/1:9,0:9:14.53:124,15,0	0/0:4,0:4:9.03:0,9,159	0/0:2,0:2:5.98:0,6,57	./.	0/0:3,0:3:2.88:0,3,46	0/0:4,0:4:9.03:0,9,164	0/0:6,0:6:18.06:0,18,317	0/0:1,4:5:2.50:0,3,26	0/1:1,1:2:6.34:50,0,6	0/1:7,0:7:4.45:4,0,42	./.	1/1:3,0:1:3:27,3,0	1/1:4,0:4:0.47:1,0,0	1/1:5,0:3:2.84:14,3,0	0/0:3,0:3:9.02:0,9,158	0/0:7,0:6:5.71:0,6,135	0/0:6,0:6:15:0,15,263	0/0:1,0:1:2.99:0,3,23	0/1:4,1:5:37.13:43,0,37	0/1:5,0:5:16.96:48,0,17	1/1:1,0:1:2.90:16,3,0
chr10	85500954	.	GGA	G	175.55	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=3.418;DP=206;FS=1.139;HRun=0;HaplotypeScore=41.9586;InbreedingCoeff=0.4916;MQ=83.98;MQ0=7;MQRankSum=-0.232;QD=7.31;ReadPosRankSum=-0.238;VQSLOD=2.9569;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:11:16.25:0,16,150	0/0:3,0:3:3:0,3,25	0/0:20,0:8:3.48:0,3,52	0/0:25,1:12:7.84:0,8,47	0/0:6,0:6:15.02:0,15,189	0/0:5,0:4:9.02:0,9,123	1/1:7,3:10:13.62:126,14,0	0/0:15,0:15:39.03:0,39,400	0/0:5,0:5:8.39:0,8,92	0/0:3,0:3:9.02:0,9,89	0/0:4,0:3:3.01:0,3,36	1/1:3,0:3:6:51,6,0	0/1:3,0:3:11.05:15,0,11	1/1:8,0:8:9.79:112,10,0	0/0:6,0:6:5.71:0,6,68	0/0:3,0:3:5.94:0,6,43	0/0:8,0:8:14.94:0,15,125	./.	0/0:5,0:4:11.98:0,12,98	0/0:15,0:15:39.32:0,39,438	0/0:6,0:5:5.87:0,6,40	0/0:6,0:6:18.05:0,18,239	0/0:6,0:6:15.04:0,15,214	0/0:5,0:5:15.03:0,15,212	0/0:2,0:2:6.01:0,6,73	0/0:8,0:8:21.04:0,21,241	0/0:11,0:11:26.64:0,27,282	0/0:2,0:2:6.02:0,6,82
chr10	85501737	.	T	TG	3477.49	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=7.010;DP=410;FS=7.789;HRun=7;HaplotypeScore=57.6404;InbreedingCoeff=0.9649;MQ=73.95;MQ0=2;MQRankSum=-2.549;QD=18.80;ReadPosRankSum=-0.874;VQSLOD=2.7111;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,2:30:43:217,43,0	1/1:0,0:3:8.63:44,9,0	0/0:12,0:10:9.25:0,9,178	0/0:17,0:15:8.34:0,8,142	0/0:19,0:19:48.01:0,48,448	0/0:14,0:14:36:0,36,338	0/0:21,0:21:57.07:0,57,544	1/1:6,7:13:24.07:290,24,0	0/0:11,0:11:30.04:0,30,290	1/1:3,0:9:14.37:74,14,0	1/1:1,0:11:23.10:131,23,0	0/0:18,0:18:39.03:0,39,371	0/0:16,0:16:33.04:0,33,318	0/0:16,0:16:45.07:0,45,434	1/1:2,11:13:33.10:398,33,0	1/1:6,12:18:42.12:497,42,0	1/1:4,0:22:48.84:248,49,0	0/0:29,0:29:81.09:0,81,773	1/1:1,6:7:15.05:181,15,0	1/1:3,7:10:24.07:284,24,0	1/1:8,12:20:33.10:393,33,0	0/0:11,0:11:33.02:0,33,302	0/0:10,0:10:27.04:0,27,259	0/0:24,0:25:62.09:0,62,578	0/0:6,0:6:18.03:0,18,174	1/1:5,7:12:27.06:302,27,0	1/1:3,6:9:24.04:266,24,0	1/1:1,4:5:15:153,15,0
chr10	85501755	.	T	TG	1966.55	PASS	AB=0.706;AC=17;AF=0.304;AN=56;BaseQRankSum=2.822;DP=424;FS=2.422;HRun=7;HaplotypeScore=63.9628;InbreedingCoeff=0.8475;MQ=77.31;MQ0=1;MQRankSum=-5.831;QD=18.73;ReadPosRankSum=-3.370;VQSLOD=2.8197;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:45.06:0,45,434	0/0:3,0:3:3:0,3,29	0/0:16,0:14:8.03:0,8,206	0/0:17,0:15:25.66:0,26,221	0/0:21,0:21:54.08:0,54,520	0/0:15,0:15:42.07:0,42,405	0/0:22,0:22:60.07:0,60,572	1/1:3,8:11:24.02:263,24,0	0/0:9,0:9:27.03:0,27,255	0/0:9,0:9:14.98:0,15,136	0/0:15,0:15:30.02:0,30,281	0/0:16,0:16:45.07:0,45,434	0/0:14,0:14:42.07:0,42,405	0/0:18,0:18:45.05:0,45,428	1/1:5,10:15:24.07:290,24,0	1/1:2,10:12:4.31:333,4,0	0/0:25,0:24:48.07:0,48,463	0/0:27,0:27:72.02:0,72,677	1/1:3,2:5:14.98:150,15,0	1/1:1,9:10:27:304,27,0	1/1:12,10:22:20.91:241,21,0	0/0:16,0:16:48.05:0,48,455	0/0:14,0:14:42.01:0,42,391	0/0:24,0:24:60.09:0,60,579	0/0:8,0:8:24.04:0,24,232	0/1:7,5:12:10.93:152,0,11	1/1:3,8:11:24.07:289,24,0	1/1:1,6:7:12.04:145,12,0
chr10	85501861	.	G	GAA	2738.47	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=0.485;DP=443;FS=2.266;HRun=9;HaplotypeScore=57.4150;InbreedingCoeff=0.7102;MQ=65.49;MQ0=0;MQRankSum=0.368;QD=23.01;ReadPosRankSum=2.560;VQSLOD=2.7101;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,31:34:89.70:1284,90,0	1/1:0,5:5:15.05:231,15,0	0/1:15,0:7:12.92:13,0,89	0/1:12,0:10:6.85:7,0,44	0/0:24,0:24:66.14:0,66,694	0/0:23,0:23:60.14:0,60,639	0/0:13,0:13:33.04:0,33,334	0/0:32,0:31:72.13:0,72,755	0/0:21,0:21:42.05:0,42,446	1/1:1,10:12:30.07:419,30,0	1/1:1,10:11:33.10:488,33,0	0/0:17,0:17:42.08:0,42,438	0/0:12,0:13:35.82:0,36,363	0/0:20,0:21:43.37:0,43,531	0/0:15,0:16:39.05:0,39,470	0/0:11,0:11:33.08:0,33,350	1/1:2,13:16:30.10:462,30,0	0/0:19,0:18:54.14:0,54,575	0/0:21,0:21:60.11:0,60,622	0/0:10,0:10:27.06:0,27,287	0/0:9,0:9:24.06:0,24,255	0/0:5,0:5:12.03:0,12,128	0/0:12,0:12:33.08:0,33,351	0/0:18,0:18:45.11:0,45,479	0/0:15,0:15:30.02:0,30,311	0/1:12,0:12:16.09:16,0,257	0/0:16,0:15:39.04:0,39,396	0/0:8,0:8:24.06:0,24,255
chr10	85502020	.	CAA	C	1644.35	PASS	AB=0.827;AC=19;AF=0.339;AN=56;BaseQRankSum=1.640;DP=384;FS=22.924;HRun=14;HaplotypeScore=62.5469;InbreedingCoeff=0.6530;MQ=63.84;MQ0=0;MQRankSum=-0.660;QD=11.42;ReadPosRankSum=6.450;VQSLOD=0.3750;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:38:60.66:0,61,630	0/0:2,0:3:6.01:0,6,67	0/0:20,0:14:4.13:0,4,236	0/0:19,0:13:15:0,15,158	0/0:13,0:15:26.54:0,27,309	0/0:16,1:18:15.59:0,16,474	0/0:16,0:19:35.02:0,35,389	1/1:8,18:26:47.93:443,48,0	0/0:17,0:20:50.12:0,50,629	0/0:10,0:12:28.72:0,29,259	0/0:7,0:10:21.04:0,21,213	0/0:14,0:15:38.57:0,39,451	0/0:7,0:7:12.01:0,12,122	0/0:13,1:14:5.28:0,5,324	1/1:4,6:11:20.68:178,21,0	0/1:3,1:4:14.58:46,0,15	0/0:10,0:15:34.87:0,35,342	0/1:10,1:14:2.97:3,0,226	1/1:8,8:16:14.86:209,15,0	1/1:4,9:13:23.94:222,24,0	1/1:8,11:21:31.87:330,32,0	0/0:1,0:1:3:0,3,25	0/0:3,0:4:12.03:0,12,143	0/1:15,2:18:19.44:19,0,367	0/0:6,0:7:12.03:0,12,155	1/1:3,4:9:8.60:114,9,0	1/1:1,7:10:29.52:246,30,0	1/1:0,1:1:3:28,3,0
chr10	85502054	.	A	AACACACAC	4269.82	PASS	AB=0.728;AC=24;AF=0.462;AN=52;BaseQRankSum=3.467;DP=381;FS=21.998;HRun=0;HaplotypeScore=124.6555;InbreedingCoeff=0.7076;MQ=60.28;MQ0=3;MQRankSum=-4.413;QD=19.77;ReadPosRankSum=-3.075;VQSLOD=2.2488;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:29:15.05:476,15,0	./.	0/0:19,0:10:0.88:0,1,3	./.	0/0:10,0:11:21.07:0,21,488	0/0:25,0:26:57.19:0,57,1345	0/0:13,0:13:18.04:0,18,403	0/1:22,0:24:13.54:108,0,14	0/0:12,0:12:18.06:0,18,431	1/1:8,0:8:12.04:292,12,0	1/1:7,0:9:6.02:209,6,0	0/0:15,0:16:33.11:0,33,789	0/0:7,0:7:15.04:0,15,331	0/0:8,0:8:6.02:0,6,150	1/1:5,7:12:21.07:867,21,0	1/1:2,5:10:17.74:683,18,0	1/1:14,1:22:21.07:618,21,0	0/0:12,0:13:33.11:0,33,806	1/1:13,0:19:10.40:196,10,0	1/1:10,0:12:8.98:73,9,0	1/1:12,0:22:11.22:244,11,0	0/0:1,0:1:3:0,3,25	0/0:3,0:3:9.03:0,9,229	0/0:15,0:16:21.03:0,21,454	0/0:5,0:6:12.04:0,12,271	1/1:7,0:20:35.96:312,36,0	1/1:6,0:16:8.15:155,8,0	0/1:2,0:9:19.90:37,0,20
chr10	85502316	.	CTCTAGAGATGAGACGATCTTATGT	C	8526.46	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.040;DP=560;FS=2.061;HRun=0;HaplotypeScore=316.5870;InbreedingCoeff=0.9355;MQ=87.57;MQ0=0;MQRankSum=-5.368;QD=42.42;ReadPosRankSum=-1.842;VQSLOD=3.2723;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.30:0,87,6949	0/0:11,0:11:30.10:0,30,1685	0/0:18,0:18:42.13:0,42,1614	0/0:25,0:24:19.17:0,19,1248	0/0:22,0:22:51.18:0,51,4310	0/0:30,0:30:75.26:0,75,4847	0/0:13,0:13:36.12:0,36,3146	1/1:14,33:47:99:1801,99,0	0/0:16,0:16:36.12:0,36,3215	0/0:23,0:23:54.19:0,54,5010	0/0:15,0:15:45.15:0,45,3733	0/0:15,0:15:39.13:0,39,3051	0/0:12,0:12:30.10:0,30,2394	0/0:19,0:19:54.19:0,54,4897	1/1:2,22:24:27.09:1716,27,0	1/1:3,14:17:18.06:1149,18,0	0/0:19,0:19:45.13:0,45,2709	0/0:14,0:14:42.12:0,42,3742	1/1:3,14:17:41.91:592,42,0	1/1:2,25:27:29.99:1426,30,0	1/1:3,14:17:3.01:164,3,0	0/0:17,0:17:51.17:0,51,3446	0/0:11,0:11:24.08:0,24,2343	0/0:30,0:30:84.29:0,84,7957	0/0:16,0:16:48.16:0,48,4553	1/1:2,18:20:38.99:981,39,0	1/1:4,16:19:6.02:344,6,0	1/1:0,12:12:6.02:354,6,0
chr10	85504462	.	G	GAAA	3513.41	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-1.909;DP=519;FS=2.152;HRun=11;HaplotypeScore=71.7517;InbreedingCoeff=0.8885;MQ=66.53;MQ0=18;MQRankSum=-2.939;QD=23.42;ReadPosRankSum=-1.997;VQSLOD=2.0634;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:28:72.09:0,72,823	0/0:6,0:6:15.04:0,15,168	0/0:46,0:16:41.87:0,42,383	0/0:39,0:11:29.55:0,30,285	0/0:13,0:15:16.95:0,17,321	0/0:21,0:22:51.04:0,51,557	0/0:18,0:20:35.90:0,36,434	1/1:7,11:21:34.03:543,34,0	0/0:6,0:6:15.03:0,15,175	0/0:21,0:22:40.23:0,40,429	0/0:13,0:13:14.53:0,15,227	0/0:19,0:19:51.07:0,51,559	0/0:14,0:14:39.10:0,39,453	0/0:15,0:15:33:0,33,363	1/1:1,0:10:26.90:205,27,0	1/1:2,0:7:14.95:117,15,0	0/0:34,0:35:90.15:0,90,1033	0/0:17,0:17:45.12:0,45,526	1/1:5,15:20:40.14:591,40,0	1/1:3,8:12:20.99:322,21,0	1/1:2,4:7:4.26:59,4,0	0/0:19,0:20:39.86:0,40,418	0/1:10,0:9:9.73:10,0,93	0/0:17,0:17:37.15:0,37,438	0/0:12,0:12:33.04:0,33,373	1/1:7,12:25:47.52:658,48,0	1/1:6,17:26:14.33:774,14,0	1/1:6,2:9:17.98:235,18,0
chr10	85505443	.	CA	C	609.88	PASS	AB=0.822;AC=17;AF=0.304;AN=56;BaseQRankSum=4.543;DP=551;FS=1.829;HRun=13;HaplotypeScore=92.7212;InbreedingCoeff=0.4152;MQ=51.65;MQ0=15;MQRankSum=-4.622;QD=2.85;ReadPosRankSum=3.241;VQSLOD=0.2132;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:38:58.48:0,58,305	0/0:1,0:2:5.52:0,6,25	1/1:18,1:4:5.94:43,6,0	0/0:23,0:8:5.11:0,5,51	0/0:30,2:31:16.97:0,17,453	0/1:19,2:19:0.29:0,0,298	0/0:25,2:26:16.06:0,16,444	0/1:9,6:16:2.26:107,0,2	0/0:7,0:10:20.82:0,21,180	0/0:25,0:26:30.67:0,31,148	0/0:10,0:12:17.08:0,17,100	0/1:15,1:16:4.77:5,0,139	0/0:27,0:28:26.02:0,26,261	0/0:20,0:20:21.01:0,21,193	0/1:20,1:21:11.65:12,0,17	0/0:13,0:13:10.29:0,10,57	0/0:18,0:18:12.83:0,13,63	0/0:26,0:26:66.05:0,66,625	1/1:8,7:14:1.81:103,2,0	0/1:5,7:12:14.37:67,0,14	1/1:10,4:13:8.89:65,9,0	0/1:14,3:17:0.02:0,0,141	0/0:19,1:21:13.91:0,14,268	0/0:15,0:15:35.88:0,36,329	0/0:21,0:20:42.77:0,43,370	0/1:16,6:23:6.19:101,0,6	1/1:14,16:33:39.74:229,40,0	1/1:3,2:3:5.91:39,6,0
chr10	85505454	.	A	AAAAAGAT	3233.06	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=4.139;DP=601;FS=3.532;HRun=0;HaplotypeScore=156.3541;InbreedingCoeff=0.7131;MQ=59.25;MQ0=13;MQRankSum=-7.585;QD=17.20;ReadPosRankSum=-3.167;VQSLOD=2.5974;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,6:41:80.65:1667,81,0	1/1:3,0:4:6.02:120,6,0	0/0:34,0:10:16.81:0,17,185	0/1:44,0:17:34.93:35,0,165	0/0:33,0:33:86.04:0,86,1647	0/0:19,0:17:49.39:0,49,936	0/0:25,0:24:65.83:0,66,1129	0/0:24,0:24:48.02:0,48,568	0/0:12,0:12:30.09:0,30,532	1/1:12,0:27:66.71:953,67,0	1/1:4,11:20:7.54:199,8,0	0/0:12,0:12:29.26:0,29,430	0/0:23,0:22:51.11:0,51,828	0/0:13,0:12:27.09:0,27,477	0/0:23,0:23:12.04:0,12,208	0/0:13,0:13:17.71:0,18,337	1/1:5,20:29:19.10:413,19,0	0/0:28,0:28:72.19:0,72,1410	0/0:18,0:17:32.81:0,33,314	0/0:10,0:10:17.41:0,17,197	0/0:11,0:11:14.68:0,15,116	0/0:20,0:20:40.80:0,41,639	0/0:20,0:20:54.12:0,54,982	0/0:17,0:17:45.15:0,45,867	0/0:23,0:23:64.18:0,64,1033	0/1:21,0:21:18.90:19,0,430	0/0:30,0:31:35.66:0,36,875	0/0:4,0:3:6.02:0,6,79
chr10	85505459	.	AAAGAT	A	3945.21	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=2.157;DP=590;FS=6.069;HRun=0;HaplotypeScore=124.2825;InbreedingCoeff=0.9645;MQ=64.10;MQ0=11;MQRankSum=-2.834;QD=26.13;ReadPosRankSum=-0.732;VQSLOD=2.6703;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:59.93:0,60,1315	0/0:4,0:4:12.04:0,12,208	0/0:39,0:14:28.66:0,29,423	0/0:47,0:21:32.67:0,33,564	0/0:30,0:30:83.77:0,84,2009	0/0:20,0:18:51.07:0,51,1119	0/0:27,0:26:56.71:0,57,1081	1/1:6,19:25:60.01:779,60,0	0/0:12,0:12:33.02:0,33,670	0/0:28,0:27:72.38:0,72,1093	0/0:21,0:21:31.14:0,31,398	0/0:13,0:13:30.05:0,30,664	0/0:20,0:19:39.12:0,39,914	0/0:13,0:12:30.09:0,30,773	1/1:1,23:24:12.01:208,12,0	1/1:1,12:13:17.68:358,18,0	0/0:22,0:22:14.88:0,15,261	0/0:28,0:28:63.10:0,63,1451	1/1:15,3:18:38.69:417,39,0	1/1:8,2:10:14.99:171,15,0	1/1:3,7:10:11.97:109,12,0	0/0:18,0:18:45.09:0,45,839	0/0:21,0:21:57.04:0,57,1204	0/0:19,0:19:48.14:0,48,1195	0/0:22,0:22:57.05:0,57,1297	1/1:5,14:19:12.26:640,12,0	1/1:18,10:28:77.88:1133,78,0	1/1:2,2:4:9:131,9,0
chr10	85505635	.	C	CT	2125.58	PASS	AB=0.730;AC=10;AF=0.179;AN=56;BaseQRankSum=-8.660;DP=578;FS=0.448;HRun=10;HaplotypeScore=81.9658;InbreedingCoeff=0.8245;MQ=76.44;MQ0=0;MQRankSum=-0.921;QD=16.35;ReadPosRankSum=2.040;VQSLOD=4.2129;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,27:34:41.39:630,41,0	1/1:2,5:7:12.03:128,12,0	0/0:18,0:18:23.89:0,24,193	0/0:17,0:17:23.53:0,24,184	0/1:14,2:16:2.08:2,0,188	0/0:17,0:17:44.93:0,45,369	0/0:17,0:18:43.95:0,44,346	0/0:26,1:29:55.88:0,56,443	0/0:25,0:25:68.85:0,69,556	0/1:7,18:28:2.15:543,0,2	1/1:5,15:20:17.42:378,17,0	0/0:14,0:15:38:0,38,301	0/0:21,0:22:55.92:0,56,443	0/0:17,0:18:46.99:0,47,375	0/0:32,0:33:85.89:0,86,689	0/0:16,0:16:35.94:0,36,296	1/1:2,23:25:57.14:607,57,0	0/0:16,0:16:44.93:0,45,369	0/0:20,0:23:44.96:0,45,326	0/0:20,0:20:32.72:0,33,416	0/0:17,0:17:41.90:0,42,339	0/0:22,0:22:50.93:0,51,419	0/0:19,0:19:44.92:0,45,366	0/0:20,0:20:56.93:0,57,467	0/0:14,0:15:37.99:0,38,301	0/0:21,2:23:24.90:0,25,408	0/0:40,0:40:99:0,102,833	0/0:4,0:4:8.72:0,9,74
chr10	85505689	.	AC	A	2143.33	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.748;DP=726;FS=1.127;HRun=1;HaplotypeScore=76.6812;InbreedingCoeff=0.9823;MQ=87.88;MQ0=0;MQRankSum=-5.449;QD=36.33;ReadPosRankSum=2.362;VQSLOD=4.0220;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,111,1680	0/0:8,0:8:21.07:0,21,335	0/0:35,0:35:99:0,105,1615	0/0:23,0:23:63.15:0,63,940	0/0:29,0:29:87.26:0,87,1340	0/0:23,0:23:69.22:0,69,1077	0/0:25,0:25:75.26:0,75,1198	0/0:26,0:26:75.25:0,75,1176	0/0:31,0:31:93.28:0,93,1435	0/0:32,0:32:95.67:0,96,1434	0/0:25,0:25:75.26:0,75,1191	0/0:37,0:37:99:0,108,1675	0/0:24,0:24:72.16:0,72,1049	0/0:29,0:29:84.29:0,84,1341	1/1:0,37:37:99:1384,99,0	1/1:0,22:22:63.21:881,63,0	0/0:24,0:24:66.23:0,66,1053	0/0:20,0:20:60.20:0,60,958	0/0:24,0:24:72.23:0,72,1125	0/0:23,0:23:66.21:0,66,1031	0/0:26,0:26:75.23:0,75,1169	0/0:18,0:18:54.18:0,54,862	0/0:21,0:21:63.21:0,63,1006	0/0:33,0:33:99:0,99,1549	0/0:17,0:17:51.12:0,51,740	0/0:31,0:31:93.30:0,93,1442	0/0:37,0:37:99:0,111,1742	0/0:4,0:4:12.04:0,12,192
chr10	85506040	.	TG	T	5224.76	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.195;DP=574;FS=9.210;HRun=4;HaplotypeScore=57.4577;InbreedingCoeff=0.9819;MQ=79.32;MQ0=0;MQRankSum=-2.105;QD=29.52;ReadPosRankSum=-0.471;VQSLOD=3.9517;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:90.94:0,91,1358	0/0:7,0:7:18.06:0,18,252	0/0:19,0:19:51.17:0,51,707	0/0:16,0:16:39.41:0,39,541	0/0:20,0:20:48.12:0,48,620	0/0:17,0:17:45.15:0,45,630	0/0:27,0:27:78.26:0,78,1092	1/1:2,26:28:78.23:923,78,0	0/0:23,0:23:66.22:0,66,923	0/0:31,0:31:90.30:0,90,1258	0/0:16,0:16:48.15:0,48,651	0/0:39,0:39:99:0,102,1412	0/0:25,0:25:75.25:0,75,1043	0/0:16,0:16:48.14:0,48,639	1/1:1,24:24:57.17:684,57,0	1/1:1,19:20:45.14:540,45,0	0/0:38,0:38:99:0,111,1517	0/0:13,0:13:39.11:0,39,527	1/1:1,12:13:36.08:417,36,0	1/1:2,16:18:42.13:503,42,0	1/1:1,24:25:63.19:756,63,0	0/0:9,0:9:27.09:0,27,375	0/0:11,0:11:33.11:0,33,462	0/0:21,0:21:60.20:0,60,838	0/0:11,0:11:33.11:0,33,461	1/1:0,16:16:45.12:526,45,0	1/1:1,29:30:69.21:828,69,0	1/1:2,0:2:5.99:48,6,0
chr10	85506311	.	T	TA	4805.38	PASS	AB=0.562;AC=16;AF=0.286;AN=56;BaseQRankSum=6.100;DP=501;FS=3.568;HRun=2;HaplotypeScore=59.5952;InbreedingCoeff=0.8560;MQ=77.16;MQ0=0;MQRankSum=-1.393;QD=34.08;ReadPosRankSum=-0.881;VQSLOD=4.6944;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1365	0/0:10,0:10:30.09:0,30,370	0/0:17,0:16:27.64:0,28,330	0/0:15,0:14:12.35:0,12,251	0/0:24,0:24:63.16:0,63,741	0/0:29,0:29:78.23:0,78,948	0/0:23,0:23:66.13:0,66,783	1/1:0,19:19:57.15:737,57,0	0/0:15,0:15:42.12:0,42,508	0/0:22,0:22:66.20:0,66,806	0/0:17,0:17:51.14:0,51,610	0/0:17,0:17:48.08:0,48,531	0/0:15,0:15:45.10:0,45,510	0/0:11,0:11:30.06:0,30,329	1/1:0,11:11:27.09:369,27,0	1/1:0,18:18:48.16:663,48,0	0/0:36,0:36:99:0,105,1263	0/0:17,0:17:51.13:0,51,613	1/1:2,19:21:57.15:752,57,0	1/1:1,14:15:35.89:406,36,0	0/1:3,8:11:5.63:227,0,6	0/0:10,0:10:30.09:0,30,360	0/0:16,0:16:48.14:0,48,582	0/0:13,0:13:39.11:0,39,468	0/0:13,0:13:33.08:0,33,385	0/1:2,10:12:3.98:365,0,4	1/1:1,30:30:84.28:1160,84,0	1/1:0,3:3:9.03:124,9,0
chr10	85507943	.	T	TC	283.43	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-2.169;DP=418;FS=5.237;HRun=8;HaplotypeScore=56.7301;InbreedingCoeff=0.6681;MQ=66.15;MQ0=12;MQRankSum=3.308;QD=10.50;ReadPosRankSum=-1.513;VQSLOD=1.6632;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,3:8:15.02:160,15,0	1/1:0,2:2:3.01:35,3,0	0/0:82,0:20:5.87:0,6,119	0/0:119,0:35:35.15:0,35,327	0/0:7,0:7:12:0,12,109	0/0:6,0:6:11.22:0,11,89	0/0:9,0:9:15:0,15,137	0/0:18,0:17:20.36:0,20,59	0/0:14,0:14:32.99:0,33,296	1/1:0,3:3:9.03:102,9,0	1/1:1,3:4:3:26,3,0	0/0:9,0:9:21:0,21,190	0/0:13,0:13:23.98:0,24,214	0/0:4,0:4:11.96:0,12,101	0/0:9,0:8:10.43:0,10,30	0/0:11,0:11:18.11:0,18,52	1/1:3,4:7:9.03:104,9,0	0/0:8,0:8:15:0,15,137	0/0:8,0:7:3.64:0,4,11	0/0:10,0:10:6.10:0,6,18	0/0:19,0:19:16.29:0,16,47	0/0:7,0:7:9:0,9,82	0/0:6,0:6:8.98:0,9,77	0/0:7,0:7:15:0,15,137	0/0:12,0:12:14.26:0,14,201	0/1:3,0:3:0.12:0,0,3	0/0:5,0:5:6.11:0,6,17	0/0:4,0:4:0.94:0,1,2
chr10	85507949	.	CCCT	C	2097.97	PASS	AB=0.994;AC=20;AF=0.357;AN=56;BaseQRankSum=4.279;DP=382;FS=34.273;HRun=0;HaplotypeScore=50.7253;InbreedingCoeff=0.7646;MQ=68.30;MQ0=15;MQRankSum=-1.918;QD=13.28;ReadPosRankSum=0.300;VQSLOD=1.4304;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:8.42:0,8,156	0/0:2,0:2:3.01:0,3,39	0/1:76,1:20:0.87:1,0,246	0/0:116,0:31:35.28:0,35,575	0/0:6,0:6:15.04:0,15,263	0/0:4,0:4:12.04:0,12,237	0/0:7,0:7:21.04:0,21,386	1/1:1,11:11:30.10:487,30,0	0/0:13,0:12:36.11:0,36,734	0/1:3,0:3:11.48:11,0,32	0/0:3,0:3:0.47:0,0,1	0/0:9,0:9:27.08:0,27,535	0/0:10,0:10:30.07:0,30,494	0/0:5,0:5:12.51:0,13,231	1/1:5,4:8:21.04:293,21,0	1/1:0,8:8:24.08:389,24,0	0/0:5,0:5:12.04:0,12,190	0/0:6,0:6:18.06:0,18,377	1/1:3,5:7:15.04:221,15,0	1/1:1,8:9:11.98:165,12,0	1/1:2,19:21:27.08:415,27,0	0/0:7,0:7:11.99:0,12,188	0/0:4,0:4:12.03:0,12,187	0/0:7,0:6:18.06:0,18,405	0/0:13,0:13:21.99:0,22,569	1/1:0,3:3:9.01:102,9,0	1/1:0,4:4:9.03:146,9,0	1/1:3,0:3:8.95:66,9,0
chr10	85507983	.	CCT	C	1050.55	PASS	AC=28;AF=0.519;AN=54;BaseQRankSum=1.621;DP=279;FS=25.478;HRun=0;HaplotypeScore=42.7414;InbreedingCoeff=0.7241;MQ=73.30;MQ0=22;MQRankSum=-1.370;QD=15.68;ReadPosRankSum=-0.239;VQSLOD=1.5998;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,3:12:12.11:153,12,0	1/1:1,0:1:3.01:37,3,0	0/0:64,0:17:23.91:0,24,254	0/0:89,1:23:20.78:0,21,163	./.	0/0:3,0:3:9.03:0,9,147	0/0:6,0:6:15.05:0,15,246	1/1:7,0:7:8.99:85,9,0	0/0:9,0:9:12.04:0,12,197	1/1:1,2:3:6.02:74,6,0	1/1:1,0:1:3.01:37,3,0	0/0:6,0:6:15.05:0,15,246	0/0:1,0:1:3.01:0,3,49	0/0:2,0:2:6.02:0,6,98	1/1:1,4:5:12.04:149,12,0	1/1:3,2:5:9.03:112,9,0	1/1:1,1:2:3.01:37,3,0	0/0:6,0:6:18.06:0,18,295	1/1:2,2:3:6.02:74,6,0	1/1:0,3:4:9.03:111,9,0	1/1:7,7:14:11.94:114,12,0	0/0:3,0:3:9.03:0,9,148	0/0:2,0:2:6.02:0,6,98	0/0:7,0:6:12.04:0,12,197	0/0:10,0:10:12.04:0,12,197	1/1:1,4:4:12.04:149,12,0	1/1:1,1:2:3.01:37,3,0	1/1:0,2:2:6.02:74,6,0
chr10	85508024	.	T	TTC	1501.16	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-1.070;DP=323;FS=17.297;HRun=0;HaplotypeScore=50.3932;InbreedingCoeff=0.6399;MQ=71.57;MQ0=15;MQRankSum=-3.390;QD=23.46;ReadPosRankSum=0.732;VQSLOD=2.5151;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:29.97:0,30,388	0/0:1,0:1:3.01:0,3,38	0/0:73,0:24:37.95:0,38,355	0/0:100,0:25:27.84:0,28,263	0/0:1,0:1:3.01:0,3,38	0/0:3,0:3:6.02:0,6,76	0/0:7,0:7:18.06:0,18,229	1/1:4,6:10:27.06:397,27,0	0/0:6,0:6:12.04:0,12,153	0/0:3,0:3:9.03:0,9,114	0/0:4,0:4:3.01:0,3,38	0/0:5,0:5:12.04:0,12,153	0/0:2,0:2:3.01:0,3,38	0/0:3,0:3:9.03:0,9,114	1/1:3,1:4:6.02:95,6,0	1/1:0,2:2:6.02:100,6,0	0/0:1,0:1:3.01:0,3,38	0/1:11,0:11:21.29:21,0,185	1/1:2,4:6:12.04:198,12,0	1/1:3,1:4:3.01:50,3,0	1/1:2,13:15:27.02:425,27,0	0/0:12,0:12:33.11:0,33,420	0/0:3,0:3:6.02:0,6,76	0/0:7,0:7:15.04:0,15,182	0/0:8,0:8:18.06:0,18,223	1/1:1,2:3:6.02:100,6,0	1/1:3,2:5:8.60:145,9,0	1/1:1,3:4:10.85:155,11,0
chr10	85508094	.	CCT	C	187.39	PASS	AB=0.938;AC=3;AF=0.094;AN=32;BaseQRankSum=0.858;DP=254;FS=0.000;HRun=0;HaplotypeScore=58.4621;InbreedingCoeff=0.2910;MQ=72.58;MQ0=11;MQRankSum=0.637;QD=6.69;ReadPosRankSum=1.231;VQSLOD=2.5743;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:3:5.98:0,6,21	./.	0/0:71,0:14:9.71:0,10,125	0/0:104,0:32:20.06:0,20,318	./.	./.	1/1:5,8:13:24.05:273,24,0	0/0:2,0:2:3:0,3,26	0/0:5,0:5:9.03:0,9,145	./.	0/0:1,0:1:3.01:0,3,47	0/0:4,0:4:9.03:0,9,139	0/0:5,0:5:12.04:0,12,179	0/0:2,0:2:3.01:0,3,48	./.	./.	./.	0/0:5,0:5:3.01:0,3,36	./.	./.	0/0:4,0:4:1.81:0,2,5	0/0:5,0:5:9.01:0,9,116	0/0:2,0:2:6.02:0,6,81	0/1:14,0:15:1.50:2,0,310	0/0:4,0:4:9.03:0,9,141	./.	./.	./.
chr10	85508133	.	TTC	T	159.19	PASS	AB=0.847;AC=9;AF=0.265;AN=34;BaseQRankSum=3.013;DP=282;FS=6.788;HRun=0;HaplotypeScore=69.0227;InbreedingCoeff=-0.1828;MQ=75.20;MQ0=17;MQRankSum=-0.325;QD=0.68;ReadPosRankSum=-0.060;VQSLOD=0.4196;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,2:10:55.37:55,0,125	./.	0/1:75,0:20:4.53:5,0,130	0/1:114,0:32:9.26:9,0,97	./.	./.	0/1:11,1:12:18.79:19,0,182	./.	0/0:5,0:5:9.03:0,9,147	./.	0/0:2,0:2:6.02:0,6,95	./.	0/0:10,0:10:24.07:0,24,365	0/0:2,0:2:3.01:0,3,49	0/0:1,0:1:0.47:0,0,1	1/1:0,0:1:2.84:14,3,0	0/1:1,1:2:30.79:31,0,43	0/1:5,1:6:44.23:59,0,44	./.	./.	0/1:3,5:7:39.81:76,0,40	0/0:2,0:1:3.01:0,3,49	0/0:4,0:4:12.04:0,12,196	0/0:14,0:13:33.11:0,33,524	0/0:4,0:4:5.93:0,6,66	./.	./.	./.
chr10	85508180	.	CCTCTCTCTCT	C	950.19	PASS	AC=14;AF=0.292;AN=48;BaseQRankSum=1.235;DP=314;FS=4.104;HRun=0;HaplotypeScore=63.2589;InbreedingCoeff=0.6063;MQ=48.88;MQ0=30;MQRankSum=-2.685;QD=31.67;ReadPosRankSum=-0.249;VQSLOD=2.2750;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:6.49:0,6,163	./.	0/0:71,0:4:3.01:0,3,119	0/0:107,0:19:11.49:0,11,303	0/0:2,0:1:3.01:0,3,153	0/0:1,0:2:6.02:0,6,244	0/0:10,0:12:33.11:0,33,1270	./.	0/0:5,0:5:9.03:0,9,409	./.	0/0:5,0:6:12.04:0,12,236	0/0:7,0:6:15.05:0,15,492	0/0:7,0:7:6.02:0,6,213	0/0:2,0:6:6.02:0,6,156	1/1:0,4:3:6.02:186,6,0	1/1:2,2:4:6.02:186,6,0	0/0:6,0:5:3.71:0,4,15	0/0:5,0:5:11.95:0,12,321	1/1:4,0:1:3.01:93,3,0	1/1:0,3:3:9.03:105,9,0	1/1:5,5:9:6.02:170,6,0	0/0:8,0:5:12.04:0,12,506	0/0:5,0:5:3.01:0,3,75	0/0:12,0:12:30.10:0,30,1233	0/0:2,0:2:6.02:0,6,254	1/1:0,4:4:12.04:331,12,0	1/1:1,0:1:3.01:31,3,0	./.
chr10	85508222	.	T	TTC	565.62	PASS	AB=1.000;AC=11;AF=0.212;AN=52;BaseQRankSum=-1.387;DP=337;FS=13.032;HRun=0;HaplotypeScore=56.4489;InbreedingCoeff=0.5912;MQ=51.37;MQ0=18;MQRankSum=-2.999;QD=18.25;ReadPosRankSum=-0.865;VQSLOD=2.3709;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,6:9:21.07:340,21,0	1/1:0,1:1:3.01:49,3,0	0/0:70,0:18:16.97:0,17,234	0/0:111,0:28:9.39:0,9,152	0/0:2,0:2:5.98:0,6,57	0/0:3,0:3:9.03:0,9,113	0/0:13,0:14:32.94:0,33,389	0/0:5,0:4:8.99:0,9,112	0/0:9,0:9:24.07:0,24,294	1/1:0,1:1:3.01:50,3,0	1/1:0,2:2:6.02:99,6,0	0/0:7,0:7:15.05:0,15,185	0/0:7,0:7:18.05:0,18,214	0/0:8,0:9:20.88:0,21,226	0/0:10,0:9:18.04:0,18,212	0/0:7,0:7:21.07:0,21,262	1/1:5,4:8:7.37:166,7,0	./.	0/0:6,0:5:12.03:0,12,140	0/0:5,0:5:9.03:0,9,113	0/0:12,0:11:18.06:0,18,225	0/0:4,0:4:9.03:0,9,112	0/0:5,0:5:15.04:0,15,176	0/0:11,0:11:1.15:0,1,216	0/0:2,0:2:3.01:0,3,38	0/1:8,0:8:1.86:2,0,238	./.	0/0:2,0:2:3.01:0,3,38
chr10	85508313	.	TCTCTCTCTCTCTCTCTCCGCC	T	1770.35	PASS	AB=1.000;AC=14;AF=0.259;AN=54;BaseQRankSum=6.776;DP=329;FS=4.238;HRun=0;HaplotypeScore=128.5723;InbreedingCoeff=0.4316;MQ=43.30;MQ0=28;MQRankSum=-6.318;QD=21.33;ReadPosRankSum=2.766;VQSLOD=1.7295;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:13.35:0,13,1057	./.	0/0:24,0:1:2.98:0,3,22	0/0:49,0:10:20.26:0,20,555	0/0:9,0:8:21.07:0,21,1269	0/0:5,0:5:15.05:0,15,1172	0/0:17,0:17:36.06:0,36,2538	0/1:6,0:6:41.05:41,0,106	0/0:12,0:12:21.07:0,21,1442	0/0:6,0:5:15.05:0,15,624	0/0:4,0:4:4.83:0,5,100	0/0:7,0:7:18.06:0,18,1311	0/0:9,0:8:21.54:0,22,1549	0/0:15,0:14:39.19:0,39,2613	1/1:3,9:12:5.53:356,6,0	1/1:0,8:8:15.05:891,15,0	0/0:10,0:10:24.08:0,24,985	0/0:14,0:13:39.13:0,39,2429	0/1:10,0:8:88.58:215,0,89	0/1:8,0:7:31.34:31,0,49	1/1:17,0:14:6.02:74,6,0	0/0:10,0:10:30.10:0,30,2174	0/0:5,0:4:9.03:0,9,833	0/0:23,0:22:51.18:0,51,3768	0/0:6,0:5:15.05:0,15,830	0/1:12,0:12:99:182,0,176	1/1:6,0:6:5.89:115,6,0	1/1:4,0:1:3:26,3,0
chr10	85508319	.	TCTCTCTCTCTCCGCC	T	2977.31	PASS	AC=18;AF=0.333;AN=54;BaseQRankSum=5.923;DP=319;FS=13.162;HRun=0;HaplotypeScore=108.6030;InbreedingCoeff=0.8356;MQ=49.30;MQ0=20;MQRankSum=-6.116;QD=36.76;ReadPosRankSum=0.656;VQSLOD=2.1955;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:29.34:0,29,1024	./.	0/0:20,0:2:5.93:0,6,57	0/0:42,0:10:7.37:0,7,439	0/0:10,0:9:24.04:0,24,890	0/0:6,0:6:18.06:0,18,924	0/0:16,0:16:36.04:0,36,1781	1/1:10,0:10:26.79:398,27,0	0/0:12,0:12:21.02:0,21,1058	0/0:6,0:5:14.84:0,15,475	0/0:5,0:5:7.84:0,8,183	0/0:7,0:7:18.06:0,18,948	0/0:9,0:8:21.07:0,21,1160	0/0:14,0:14:38.83:0,39,1900	1/1:9,0:9:5.68:229,6,0	1/1:8,0:8:15.05:574,15,0	0/0:10,0:10:24.08:0,24,770	0/0:16,0:15:45.15:0,45,1809	1/1:2,7:7:21.02:580,21,0	1/1:1,7:7:5.97:156,6,0	1/1:3,14:14:6.02:228,6,0	0/0:12,0:12:36.12:0,36,1720	0/0:5,0:4:9.03:0,9,607	0/0:23,0:22:54.19:0,54,2965	0/0:4,0:5:13.86:0,14,585	1/1:1,11:12:17.85:685,18,0	1/1:1,5:6:5.90:252,6,0	1/1:2,0:1:3.01:64,3,0
chr10	85508329	.	TCCGCC	T	1433.77	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=6.121;DP=318;FS=13.547;HRun=0;HaplotypeScore=78.0103;InbreedingCoeff=0.8212;MQ=61.10;MQ0=9;MQRankSum=-6.709;QD=18.15;ReadPosRankSum=2.620;VQSLOD=2.1934;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:36.65:0,37,495	0/0:1,0:1:3.01:0,3,85	0/0:15,0:6:17.97:0,18,358	0/0:21,0:8:4.32:0,4,223	0/0:12,0:12:30.06:0,30,781	0/0:7,0:7:21.07:0,21,503	0/0:15,0:15:36.94:0,37,824	1/1:0,11:12:35.75:458,36,0	0/0:14,0:14:27.09:0,27,733	0/0:7,0:7:14.80:0,15,308	0/0:8,0:8:16.87:0,17,300	0/0:8,0:8:21.07:0,21,478	0/0:11,0:11:24.08:0,24,659	0/0:18,0:18:50.38:0,50,1228	1/1:9,0:9:6.02:90,6,0	1/1:8,0:8:15.05:225,15,0	0/0:14,0:14:16.74:0,17,532	0/0:16,0:16:47.50:0,47,960	1/1:7,0:7:18.04:298,18,0	1/1:7,0:7:3:46,3,0	1/1:15,0:14:6.02:102,6,0	0/0:14,0:14:42.14:0,42,1064	0/0:6,0:5:11.96:0,12,286	0/0:25,0:25:72.11:0,72,1834	0/0:6,0:6:15.05:0,15,399	1/1:11,0:11:15.05:248,15,0	1/1:6,0:6:6.02:92,6,0	1/1:0,1:1:3.01:64,3,0
chr10	85508332	.	G	GC	413.13	PASS	AB=0.792;AC=6;AF=0.107;AN=56;BaseQRankSum=-1.479;DP=312;FS=0.000;HRun=9;HaplotypeScore=63.2215;InbreedingCoeff=0.4249;MQ=63.99;MQ0=7;MQRankSum=-0.645;QD=8.98;ReadPosRankSum=-3.190;VQSLOD=1.2611;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,3:20:6.63:87,0,7	0/0:2,0:2:2.99:0,3,26	0/0:12,0:7:17.95:0,18,145	0/0:17,0:7:9.62:0,10,61	0/0:11,0:11:26.99:0,27,234	0/0:8,0:8:14.96:0,15,130	0/0:16,0:17:25.90:0,26,205	0/0:11,0:12:10.91:0,11,33	0/0:13,0:13:17.93:0,18,156	0/1:3,2:5:38.45:54,0,38	1/1:4,4:8:12.98:135,13,0	0/0:9,0:9:11.88:0,12,100	0/0:10,0:10:17.98:0,18,156	0/0:19,0:19:40.87:0,41,360	0/0:9,0:9:4.44:0,4,14	0/0:8,0:8:11.10:0,11,35	1/1:3,10:13:24.54:266,25,0	0/0:13,0:17:34.83:0,35,252	0/0:7,0:7:11.10:0,11,35	0/0:8,0:7:2.22:0,2,7	0/0:17,0:14:2.51:0,3,7	0/0:13,0:14:28.21:0,28,219	0/0:7,0:6:2.97:0,3,26	0/0:24,0:26:57.93:0,58,473	0/0:5,0:5:15:0,15,130	0/0:11,0:11:10.92:0,11,34	0/0:6,0:6:4.26:0,4,14	0/0:1,0:1:2.04:0,2,6
chr10	85508699	.	T	TA	6181.11	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.811;DP=553;FS=7.272;HRun=6;HaplotypeScore=68.3059;InbreedingCoeff=0.9959;MQ=76.34;MQ0=0;MQRankSum=-1.837;QD=32.36;ReadPosRankSum=0.465;VQSLOD=4.9711;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.04:0,66,644	0/0:6,0:6:15.02:0,15,153	0/0:24,0:24:50.79:0,51,473	0/0:14,0:14:19.60:0,20,231	0/0:25,0:25:72.16:0,72,734	0/0:15,0:15:45.10:0,45,459	0/0:20,0:20:57.09:0,57,563	1/1:7,16:23:48.15:604,48,0	0/0:18,0:18:54.11:0,54,544	0/0:23,0:23:60.13:0,60,612	0/0:26,0:26:78.11:0,78,782	0/0:25,0:25:66.08:0,66,648	0/0:8,0:8:21.04:0,21,214	0/0:15,0:15:45.07:0,45,445	1/1:6,17:23:57.14:699,57,0	1/1:1,20:21:63.12:759,63,0	0/0:23,0:23:69.14:0,69,697	0/0:17,0:17:48.10:0,48,483	1/1:1,19:20:57.16:690,57,0	1/1:0,25:24:72.23:906,72,0	1/1:3,10:13:33.09:402,33,0	0/0:18,0:18:51.12:0,51,520	0/0:23,0:23:60.12:0,60,605	0/0:20,0:20:57.08:0,57,565	0/0:19,0:19:54.12:0,54,551	1/1:3,21:24:60.18:741,60,0	1/1:5,25:31:87.22:1044,87,0	1/1:3,8:11:30.05:338,30,0
chr10	85508778	.	G	GAGA	10978.62	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-10.066;DP=619;FS=0.686;HRun=0;HaplotypeScore=85.0580;InbreedingCoeff=0.9991;MQ=83.02;MQ0=0;MQRankSum=-4.879;QD=50.36;ReadPosRankSum=-1.298;VQSLOD=6.1386;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.29:0,84,1350	0/0:12,0:12:33.11:0,33,530	0/0:25,0:25:63.21:0,63,991	0/0:15,0:14:30.05:0,30,430	0/0:30,0:30:81.27:0,81,1274	0/0:19,0:19:54.17:0,54,838	0/0:29,0:29:75.22:0,75,1155	1/1:7,25:34:87.28:1837,87,0	0/0:24,0:24:72.25:0,72,1153	0/0:31,0:31:84.23:0,84,1239	0/0:20,0:20:54.17:0,54,843	0/0:22,0:22:60.20:0,60,964	0/0:14,0:14:42.13:0,42,651	0/0:16,0:16:48.15:0,48,748	1/1:3,18:21:57.15:1197,57,0	1/1:7,21:28:21:1309,21,0	0/0:23,0:23:63.11:0,63,980	0/0:17,0:17:45.15:0,45,723	1/1:5,13:17:30.06:616,30,0	1/1:7,22:29:57.18:1200,57,0	1/1:4,23:27:63.16:1342,63,0	0/0:21,0:21:57.18:0,57,916	0/0:20,0:20:60.18:0,60,939	0/0:15,0:15:42.13:0,42,651	0/0:18,0:18:51.17:0,51,820	1/1:5,21:26:72.23:1499,72,0	1/1:5,19:24:63.22:1389,63,0	1/1:5,6:11:30.10:589,30,0
chr10	85509796	.	CA	C	4606.27	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.714;DP=611;FS=3.998;HRun=1;HaplotypeScore=59.8336;InbreedingCoeff=0.9927;MQ=86.38;MQ0=0;MQRankSum=-2.984;QD=40.41;ReadPosRankSum=0.699;VQSLOD=5.4118;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:99:1593,114,0	1/1:0,4:4:12.04:168,12,0	0/0:26,0:26:74.21:0,74,1077	0/0:20,0:20:38.55:0,39,775	0/0:22,0:22:63.19:0,63,961	0/0:22,0:22:66.23:0,66,1055	0/0:22,0:22:66.23:0,66,1055	0/0:24,0:24:72.24:0,72,1131	0/0:19,0:19:57.18:0,57,887	1/1:0,34:34:96.32:1336,96,0	1/1:0,13:13:39.13:545,39,0	0/0:27,0:27:81.26:0,81,1262	0/0:19,0:19:57.19:0,57,911	0/0:23,0:23:69.22:0,69,1073	0/0:22,0:22:66.21:0,66,1032	0/0:26,0:26:78.25:0,78,1222	1/1:0,24:24:69.23:965,69,0	0/0:17,0:17:51.15:0,51,789	0/0:29,0:29:87.28:0,87,1367	0/0:18,0:18:54.18:0,54,862	0/0:26,0:26:78.27:0,78,1247	0/0:18,0:18:54.18:0,54,860	0/0:16,0:16:48.16:0,48,760	0/0:21,0:21:63.21:0,63,1001	0/0:12,0:12:36.10:0,36,551	0/0:32,1:33:57.39:0,57,1473	0/0:22,0:22:66.23:0,66,1055	0/0:13,0:13:39.13:0,39,620
chr10	85510530	.	C	CAA	1288.61	PASS	AB=0.632;AC=17;AF=0.304;AN=56;BaseQRankSum=-0.171;DP=520;FS=4.523;HRun=14;HaplotypeScore=84.6421;InbreedingCoeff=0.7262;MQ=75.18;MQ0=4;MQRankSum=-3.093;QD=8.53;ReadPosRankSum=-5.844;VQSLOD=0.1215;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:34:40.84:0,41,334	0/0:10,0:10:10.58:0,11,98	0/0:30,0:16:19.12:0,19,109	0/0:17,0:13:2.76:0,3,24	0/0:27,0:27:16.16:0,16,148	0/0:10,0:14:20.06:0,20,135	0/0:21,0:26:1.53:0,2,176	1/1:16,10:31:16.68:276,17,0	0/0:17,0:20:19.95:0,20,148	0/0:13,0:13:8.72:0,9,75	0/0:12,0:13:17.49:0,17,137	0/0:14,0:17:26.73:0,27,199	0/0:14,0:19:19.16:0,19,113	0/0:24,0:27:18.90:0,19,197	0/1:4,0:11:3.53:4,0,48	1/1:5,0:19:2.85:31,3,0	0/0:18,0:23:39.90:0,40,270	0/0:6,0:9:14.33:0,14,99	1/1:10,6:19:16.29:226,16,0	1/1:9,1:11:18.80:153,19,0	1/1:6,10:17:4.93:18,5,0	0/0:10,0:15:10.26:0,10,59	0/0:12,0:13:8.53:0,9,62	0/0:21,0:22:35.84:0,36,289	0/0:17,0:19:1.59:0,2,142	1/1:9,13:24:43.77:468,44,0	1/1:8,3:11:12.75:218,13,0	1/1:1,5:6:6.02:79,6,0
chr10	85512799	.	A	AC	3895.82	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.963;DP=675;FS=3.373;HRun=6;HaplotypeScore=118.0086;InbreedingCoeff=0.9970;MQ=79.85;MQ0=0;MQRankSum=-4.809;QD=29.97;ReadPosRankSum=0.177;VQSLOD=2.6608;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,35:40:90.28:1113,90,0	1/1:0,7:7:17.95:223,18,0	0/0:28,0:27:57.30:0,57,525	0/0:19,0:19:25.04:0,25,283	0/0:22,0:22:60:0,60,596	0/0:24,0:24:66.13:0,66,663	0/0:30,0:30:84.13:0,84,834	0/0:34,0:34:73.87:0,74,369	0/0:19,0:19:57.09:0,57,562	1/1:8,22:31:75.16:877,75,0	1/1:3,14:17:36.11:437,36,0	0/0:38,0:38:99:0,105,1046	0/0:27,0:27:69.12:0,69,685	0/0:27,0:27:72.12:0,72,711	0/0:22,0:22:60.03:0,60,317	0/0:23,0:23:54.13:0,54,271	1/1:1,34:35:99:1245,102,0	0/0:30,0:30:90.14:0,90,898	0/0:9,0:9:25.84:0,26,140	0/0:18,0:18:45.44:0,45,217	0/0:49,0:49:99:0,120,588	0/0:19,0:19:48.10:0,48,489	0/0:18,0:18:51.08:0,51,504	0/0:25,0:25:72.16:0,72,734	0/0:16,0:16:45.09:0,45,454	0/0:19,0:19:51.42:0,51,272	0/0:20,0:20:54.20:0,54,281	0/0:9,0:9:25.57:0,26,122
chr10	85512805	.	CA	C	7025.12	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=14.306;DP=676;FS=4.350;HRun=6;HaplotypeScore=103.2167;InbreedingCoeff=0.9982;MQ=80.89;MQ0=0;MQRankSum=-2.163;QD=20.97;ReadPosRankSum=-0.202;VQSLOD=3.6034;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:39:88.19:415,88,0	1/1:8,0:8:16.81:77,17,0	0/0:28,0:28:58.75:0,59,656	0/0:18,0:18:30.88:0,31,374	0/0:23,0:23:66.17:0,66,808	0/0:23,0:23:66.19:0,66,830	0/0:32,0:32:93.26:0,93,1166	1/1:2,27:29:81.16:846,81,0	0/0:21,0:21:54.15:0,54,673	1/1:29,0:29:58.93:348,59,0	1/1:15,0:15:34.60:154,35,0	0/0:37,0:37:99:0,99,1272	0/0:25,0:25:69.17:0,69,851	0/0:25,0:25:68.24:0,68,847	1/1:3,20:23:54.13:579,54,0	1/1:1,21:22:54.13:580,54,0	1/1:40,0:40:99:485,102,0	0/0:31,0:31:90.28:0,90,1155	1/1:1,11:12:30.03:299,30,0	1/1:1,18:19:45.04:525,45,0	1/1:3,45:48:99:1287,120,0	0/0:19,0:19:57.17:0,57,715	0/0:18,0:18:45.15:0,45,584	0/0:25,0:25:75.23:0,75,960	0/0:16,0:16:45.14:0,45,572	1/1:1,20:21:60.04:595,60,0	1/1:2,19:21:51.13:547,51,0	1/1:0,9:9:27.07:289,27,0
chr10	85514696	.	T	TTA	11388.92	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-18.573;DP=775;FS=2.072;HRun=0;HaplotypeScore=92.7628;InbreedingCoeff=1.0000;MQ=86.77;MQ0=2;MQRankSum=-3.305;QD=47.65;ReadPosRankSum=1.374;VQSLOD=5.9915;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,123,1736	0/0:13,0:13:36.10:0,36,496	0/0:25,0:25:66.22:0,66,933	0/0:26,0:26:66.22:0,66,931	0/0:24,0:24:68.82:0,69,971	0/0:20,0:20:57.17:0,57,768	0/0:30,0:30:87.28:0,87,1229	1/1:1,26:27:78.27:1405,78,0	0/0:26,0:26:75.25:0,75,1072	0/0:38,0:38:99:0,108,1523	0/0:23,0:23:63.21:0,63,901	0/0:37,0:37:99:0,111,1554	0/0:35,0:35:96.32:0,96,1375	0/0:36,0:36:99:0,99,1416	1/1:0,35:34:87.30:1595,87,0	1/1:2,30:32:90.31:1643,90,0	0/0:28,0:28:84.24:0,84,1146	0/0:21,0:21:57.19:0,57,812	1/1:0,20:20:57.20:1028,57,0	1/1:0,18:18:48.16:880,48,0	1/1:2,32:35:87.77:1595,88,0	0/0:29,0:29:87.29:0,87,1247	0/0:30,0:30:84.28:0,84,1193	0/0:23,0:23:60.20:0,60,860	0/0:26,0:26:78.26:0,78,1102	1/1:0,22:22:66.23:1209,66,0	1/1:0,34:34:72.11:1319,72,0	1/1:0,16:15:39.13:714,39,0
chr10	85518635	.	AT	A	8581.54	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.232;DP=712;FS=7.303;HRun=1;HaplotypeScore=71.0171;InbreedingCoeff=0.9998;MQ=75.38;MQ0=0;MQRankSum=-2.618;QD=39.19;ReadPosRankSum=-1.183;VQSLOD=4.7904;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,160,2502	0/0:11,0:11:33.11:0,33,527	0/0:16,0:16:45.12:0,45,652	0/0:14,0:13:31.34:0,31,465	0/0:22,0:22:66.21:0,66,1030	0/0:22,0:22:66.21:0,66,1031	0/0:26,0:26:78.21:0,78,1173	1/1:0,37:37:99:1514,111,0	0/0:21,0:21:63.20:0,63,981	0/0:25,0:25:75.24:0,75,1156	0/0:27,0:27:81.26:0,81,1271	0/0:25,0:25:75.26:0,75,1198	0/0:24,0:24:69.22:0,69,1079	0/0:26,0:26:78.25:0,78,1222	1/1:0,30:30:90.30:1258,90,0	1/1:1,29:30:36.36:1084,36,0	0/0:41,0:41:99:0,120,1894	0/0:33,0:33:99:0,99,1531	1/1:0,26:26:78.24:1038,78,0	1/1:0,23:23:69.12:900,69,0	1/1:0,16:16:39.13:545,39,0	0/0:22,0:22:66.20:0,66,1007	0/0:26,0:26:78.27:0,78,1242	0/0:28,0:28:84.23:0,84,1269	0/0:31,0:31:93.31:0,93,1463	1/1:0,25:25:75.23:1028,75,0	1/1:0,22:22:57.19:796,57,0	1/1:0,10:10:30.10:419,30,0
chr10	85519700	.	T	TA	1860.26	PASS	AB=0.842;AC=38;AF=0.679;AN=56;BaseQRankSum=-4.218;DP=362;FS=17.272;HRun=13;HaplotypeScore=37.1341;InbreedingCoeff=0.3406;MQ=38.52;MQ0=80;MQRankSum=1.069;QD=6.50;ReadPosRankSum=1.100;VQSLOD=0.4828;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,13:17:21.35:224,21,0	0/1:5,2:7:8.28:46,0,8	0/0:8,0:2:2.92:0,3,17	0/0:10,0:3:4.52:0,5,24	1/1:7,9:19:6.79:183,7,0	0/1:14,7:17:17.62:93,0,18	0/1:14,2:8:10.14:22,0,10	0/0:8,0:3:1.24:0,1,3	1/1:7,6:8:9.01:84,9,0	1/1:12,7:16:17.11:130,17,0	1/1:13,5:19:9.24:60,9,0	1/1:2,4:5:9.01:84,9,0	1/1:3,5:6:9.01:83,9,0	1/1:5,1:2:6:53,6,0	1/1:10,0:5:5.84:41,6,0	1/1:7,0:4:2.74:12,3,0	1/1:20,18:24:14.78:298,15,0	0/1:6,8:11:10.96:155,0,11	0/0:17,0:12:15.59:0,16,62	1/1:9,0:6:2.93:11,3,0	1/1:5,0:3:2.88:15,3,0	0/1:1,0:1:0:0,0,0	1/1:1,3:3:8.93:73,9,0	1/1:4,1:3:2.90:16,3,0	1/1:6,12:18:27.08:333,27,0	0/0:21,0:13:9.54:0,10,62	0/1:13,0:9:1.66:2,0,6	0/0:12,0:5:7.11:0,7,24
chr10	85519712	.	A	AGT	199.70	PASS	AB=0.897;AC=9;AF=0.161;AN=56;BaseQRankSum=3.387;DP=319;FS=4.430;HRun=0;HaplotypeScore=43.4161;InbreedingCoeff=0.0596;MQ=40.44;MQ0=49;MQRankSum=-1.850;QD=1.82;ReadPosRankSum=3.758;VQSLOD=0.9832;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,4:16:99:109,0,271	0/0:6,0:6:12.03:0,12,146	0/0:8,0:2:2.99:0,3,48	0/0:10,0:3:6.02:0,6,70	0/0:20,0:19:39.32:0,39,412	0/1:16,1:15:23.61:24,0,242	0/0:14,0:8:9.03:0,9,117	0/0:7,0:2:4.50:0,4,16	0/0:9,0:6:9.03:0,9,110	0/0:17,0:16:30.17:0,30,405	0/0:20,0:19:18.74:0,19,187	0/0:8,0:7:11.98:0,12,124	0/0:7,0:6:9.02:0,9,98	0/0:4,0:2:3.89:0,4,31	0/0:6,0:3:4.02:0,4,40	0/0:7,0:5:6.02:0,6,71	0/1:37,2:24:44.90:45,0,434	0/0:13,0:11:30.02:0,30,337	0/0:14,0:10:20.42:0,20,217	0/0:8,0:5:6.07:0,6,18	1/1:4,0:3:3:29,3,0	0/0:2,0:2:3.01:0,3,34	0/0:3,0:3:8.99:0,9,96	1/1:3,0:3:3:29,3,0	0/0:16,0:15:38.81:0,39,478	0/1:14,1:11:11.22:11,0,276	0/0:10,0:7:9.90:0,10,48	0/1:8,2:5:32.04:83,0,32
chr10	85519784	.	CT	C	3840.54	PASS	AB=1.000;AC=47;AF=0.904;AN=52;BaseQRankSum=-2.868;DP=271;FS=5.128;HRun=2;HaplotypeScore=30.1571;InbreedingCoeff=0.3714;MQ=57.55;MQ0=18;MQRankSum=-4.094;QD=17.46;ReadPosRankSum=3.785;VQSLOD=3.7191;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:8:12.04:148,12,0	1/1:0,6:6:12.04:155,12,0	0/0:44,0:9:14.02:0,14,199	0/1:56,0:8:2.98:3,0,84	1/1:1,9:10:21.07:271,21,0	1/1:0,12:12:27.09:350,27,0	1/1:0,10:8:12.04:155,12,0	1/1:1,8:9:24.08:311,24,0	1/1:0,3:2:3.01:39,3,0	1/1:0,11:11:30.10:389,30,0	1/1:0,6:6:6.02:75,6,0	1/1:1,6:5:6.02:78,6,0	1/1:1,6:5:12.04:155,12,0	1/1:0,4:3:9.03:117,9,0	1/1:0,4:4:12.04:155,12,0	1/1:0,9:9:21.07:272,21,0	1/1:1,10:9:12.04:153,12,0	./.	1/1:1,2:3:6.02:78,6,0	1/1:1,11:11:18.06:235,18,0	1/1:0,4:1:3.01:39,3,0	./.	1/1:0,1:1:3.01:39,3,0	1/1:0,3:3:3.01:39,3,0	1/1:0,4:4:6.02:78,6,0	1/1:0,12:11:33.11:428,33,0	0/0:4,1:3:0:0,0,0	1/1:1,4:3:6.02:77,6,0
chr10	85521935	.	C	CTT	370.65	PASS	AB=0.967;AC=34;AF=0.607;AN=56;BaseQRankSum=5.331;DP=325;FS=1.263;HRun=17;HaplotypeScore=180.5070;InbreedingCoeff=0.4216;MQ=66.78;MQ0=3;MQRankSum=-2.605;QD=1.74;ReadPosRankSum=1.120;VQSLOD=-0.5504;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:18.63:112,19,0	1/1:5,0:5:5.93:39,6,0	0/0:32,0:10:3.68:0,4,42	0/0:19,0:14:1.22:0,1,22	0/1:15,0:16:5.19:5,0,15	0/1:10,1:13:21.73:22,0,52	0/0:9,0:9:14.68:0,15,99	1/1:10,0:10:7.12:17,7,0	0/0:4,0:6:2.32:0,2,44	1/1:12,0:11:3.86:31,4,0	1/1:2,0:9:5.98:49,6,0	0/0:13,0:13:18.15:0,18,94	0/0:5,0:5:4.41:0,4,57	1/1:4,0:4:0.47:2,0,0	1/1:11,0:11:6.23:17,6,0	1/1:9,0:9:5.66:18,6,0	1/1:9,6:16:5.97:43,6,0	0/0:15,0:15:7.84:0,8,52	1/1:13,0:12:16.26:53,16,0	1/1:18,0:17:10.58:35,11,0	1/1:6,0:6:2.03:5,2,0	0/0:6,0:6:4.92:0,5,35	0/1:7,0:7:0:0,0,0	0/0:6,0:6:2.85:0,3,17	0/1:16,0:16:15.71:16,0,65	1/1:14,0:14:11.74:35,12,0	1/1:15,0:15:9.66:32,10,0	1/1:5,0:5:1.82:5,2,0
chr10	85522362	.	C	CACT	1791.45	PASS	AB=0.816;AC=11;AF=0.204;AN=54;BaseQRankSum=-3.204;DP=322;FS=8.428;HRun=0;HaplotypeScore=44.8264;InbreedingCoeff=0.4560;MQ=59.21;MQ0=10;MQRankSum=1.545;QD=13.78;ReadPosRankSum=3.692;VQSLOD=1.7332;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:3,17:22:18.31:387,0,18	1/1:5,0:5:14.34:207,14,0	0/1:15,0:5:0.81:1,0,37	0/0:17,0:12:12.24:0,12,129	0/0:5,0:5:11.88:0,12,130	0/0:6,0:6:11.99:0,12,101	0/1:28,0:28:58.26:58,0,337	0/0:11,0:10:27.02:0,27,245	0/0:9,0:9:27.01:0,27,323	1/1:2,10:12:27.02:398,27,0	0/1:3,5:9:5.07:175,0,5	0/0:13,0:12:36.03:0,36,455	0/0:9,0:9:26.95:0,27,347	0/0:15,0:15:41.99:0,42,572	0/0:13,0:14:38.94:0,39,346	0/0:7,0:7:21.02:0,21,197	1/1:2,25:27:30.10:687,30,0	0/0:13,0:13:35.97:0,36,437	0/0:9,0:6:15:0,15,154	0/0:4,0:4:11.94:0,12,138	0/0:22,0:22:63.01:0,63,659	0/0:5,0:5:11.38:0,11,113	./.	0/0:16,0:16:38.82:0,39,357	0/0:3,0:3:9.01:0,9,105	0/1:11,0:11:36.15:36,0,267	0/0:10,0:10:29.98:0,30,346	0/0:4,0:4:11.98:0,12,147
chr10	85528874	.	ATCTCTG	A	3490.98	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.222;DP=619;FS=0.000;HRun=0;HaplotypeScore=127.8631;InbreedingCoeff=0.9756;MQ=81.83;MQ0=0;MQRankSum=-10.289;QD=38.36;ReadPosRankSum=-0.248;VQSLOD=3.2826;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,26:32:36.12:799,36,0	1/1:1,5:6:9.03:205,9,0	0/0:23,0:23:51.64:0,52,1555	0/0:18,0:18:42.14:0,42,1177	0/0:23,0:23:66.21:0,66,2099	0/0:21,0:21:60.21:0,60,2058	0/0:22,0:22:51.18:0,51,1637	0/0:40,0:40:96.33:0,96,3128	0/0:27,0:27:72.23:0,72,2424	1/1:1,18:19:51.17:1120,51,0	1/1:0,16:16:33.11:738,33,0	0/0:27,0:27:72.25:0,72,2484	0/0:23,0:23:66.23:0,66,2260	0/0:15,0:15:45.15:0,45,1568	0/0:27,0:27:78.27:0,78,2682	0/0:32,0:32:90.30:0,90,3022	1/1:0,18:18:30.10:629,30,0	0/0:11,0:11:33.11:0,33,1150	0/0:14,0:14:33.11:0,33,1127	0/0:32,0:32:93.32:0,93,2928	0/0:39,0:39:99:0,108,3587	0/0:10,0:10:24.08:0,24,772	0/0:16,0:16:48.16:0,48,1631	0/0:27,0:27:75.26:0,75,2574	0/0:22,0:22:63.22:0,63,2165	0/0:24,0:24:10.49:0,10,2067	0/0:24,0:23:69.24:0,69,2396	0/0:11,0:11:33.11:0,33,1149
chr10	85529055	.	CGT	C	584.43	PASS	AB=0.957;AC=13;AF=0.250;AN=52;BaseQRankSum=2.641;DP=657;FS=19.203;HRun=0;HaplotypeScore=97.1990;InbreedingCoeff=0.3643;MQ=69.59;MQ0=17;MQRankSum=-0.345;QD=2.74;ReadPosRankSum=0.231;VQSLOD=0.8701;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:28:2.98:0,3,21	0/0:2,0:4:0:0,0,0	./.	./.	0/0:11,0:10:5.99:0,6,65	0/1:14,0:14:1.90:2,0,78	0/0:17,0:20:3:0,3,26	0/0:33,0:33:9.55:0,10,51	0/0:17,0:17:17.83:0,18,242	0/0:19,0:24:33.01:0,33,330	0/0:8,0:11:6:0,6,51	1/1:20,9:31:18.08:167,18,0	1/1:10,2:12:11.52:106,12,0	1/1:15,6:22:11.86:111,12,0	0/1:29,1:31:43.49:43,0,300	0/0:32,0:32:13.40:0,13,416	0/0:20,0:31:32.98:0,33,282	0/0:19,0:17:15.01:0,15,179	0/0:17,0:19:13.25:0,13,122	0/0:18,0:29:23.88:0,24,206	0/0:53,0:54:32.70:0,33,284	0/1:21,1:22:54.71:55,0,246	0/0:13,0:12:9:0,9,88	0/1:25,2:40:69.45:69,0,256	0/1:14,1:15:14.18:14,0,201	1/1:16,7:22:17.87:175,18,0	0/0:23,0:23:32.99:0,33,356	0/0:13,0:12:3.01:0,3,44
chr10	85536487	.	TACACAC	T	4174.97	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.590;DP=709;FS=2.148;HRun=0;HaplotypeScore=162.3151;InbreedingCoeff=0.9602;MQ=60.27;MQ0=13;MQRankSum=-10.166;QD=24.85;ReadPosRankSum=-4.720;VQSLOD=2.5633;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:41.94:0,42,1074	0/0:8,0:8:9.03:0,9,284	0/0:28,1:13:6.02:0,6,138	0/0:32,0:17:15.05:0,15,438	0/0:23,0:26:60.20:0,60,1735	0/0:20,0:21:42.14:0,42,1283	0/0:9,0:20:30.10:0,30,798	1/1:20,13:33:39.10:706,39,0	0/0:29,0:32:83.56:0,84,2593	0/0:31,0:31:54.65:0,55,1540	0/0:26,0:27:54.18:0,54,1610	0/0:24,0:25:60.21:0,60,1886	0/0:25,0:28:60.19:0,60,1725	0/0:24,0:24:48.16:0,48,1515	0/0:7,0:32:67.73:0,68,955	0/0:13,0:40:73.31:0,73,996	0/0:33,0:36:62.50:0,63,1892	0/0:17,0:19:51.17:0,51,1518	1/1:6,5:11:15.04:276,15,0	1/1:13,17:30:44.93:602,45,0	1/1:18,6:23:14.56:120,15,0	0/0:22,0:22:29.77:0,30,965	0/0:16,0:19:48.16:0,48,1324	0/0:17,0:19:42.10:0,42,1198	0/0:17,0:18:51.17:0,51,1581	1/1:7,17:24:51.17:1066,51,0	1/1:11,17:29:51.17:1028,51,0	1/1:3,13:16:18.06:376,18,0
chr10	85536550	.	G	GTA	3636.57	PASS	AB=0.747;AC=12;AF=0.214;AN=56;BaseQRankSum=-11.118;DP=655;FS=0.444;HRun=0;HaplotypeScore=107.5519;InbreedingCoeff=0.7767;MQ=57.90;MQ0=6;MQRankSum=0.486;QD=23.92;ReadPosRankSum=2.888;VQSLOD=4.1831;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,20:25:1.07:505,0,1	1/1:0,14:14:30.10:492,30,0	1/1:7,0:6:2.04:6,2,0	0/0:10,0:4:5.74:0,6,30	0/0:27,0:29:71.79:0,72,814	0/0:21,0:21:27:0,27,461	0/0:17,0:17:39.11:0,39,470	0/0:33,0:33:72.11:0,72,790	0/0:33,0:33:69.08:0,69,751	1/1:5,25:29:75.16:1058,75,0	1/1:3,21:24:36.12:590,36,0	0/0:24,0:27:59.60:0,60,607	0/0:26,0:26:63.11:0,63,711	0/0:21,0:21:51.06:0,51,563	0/0:25,0:24:54.03:0,54,585	0/0:36,0:36:75.03:0,75,829	1/1:6,32:38:60.16:954,60,0	0/1:12,1:12:31.01:31,0,143	0/0:16,0:12:23.99:0,24,236	0/0:38,0:39:92.70:0,93,967	0/0:20,0:20:38.90:0,39,386	0/0:14,0:15:32.89:0,33,345	0/0:26,0:26:63.08:0,63,710	0/0:18,0:18:45.08:0,45,505	0/0:20,0:20:54.17:0,54,668	0/0:25,0:25:69.01:0,69,750	0/0:34,0:34:71.95:0,72,794	0/0:11,0:12:32.86:0,33,352
chr10	85538270	.	GAGAAAGAAAGAA	G	2753.89	PASS	AB=0.917;AC=30;AF=0.577;AN=52;BaseQRankSum=10.742;DP=511;FS=28.085;HRun=0;HaplotypeScore=171.0571;InbreedingCoeff=0.5958;MQ=60.52;MQ0=9;MQRankSum=-2.710;QD=8.85;ReadPosRankSum=2.403;VQSLOD=1.3102;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:26.46:252,0,26	1/1:11,0:11:15.86:126,16,0	./.	./.	0/0:29,0:29:69.23:0,69,3048	0/0:19,0:19:42.12:0,42,1709	0/0:12,0:11:20.64:0,21,620	0/1:14,0:23:26.96:113,0,27	0/0:15,0:15:36.11:0,36,1513	1/1:23,0:23:21.28:227,21,0	0/1:30,0:30:53.33:168,0,53	1/1:4,9:14:9.03:287,9,0	1/1:9,18:27:15.05:519,15,0	1/1:6,19:25:27.09:921,27,0	1/1:11,0:11:7.35:45,7,0	1/1:14,0:14:6.20:34,6,0	1/1:26,0:26:3.01:87,3,0	0/0:15,0:15:33.10:0,33,935	1/1:8,0:11:3:27,3,0	1/1:17,0:16:6.13:35,6,0	1/1:8,0:8:6.10:34,6,0	0/0:10,0:10:24.04:0,24,859	0/0:19,0:19:42.14:0,42,2034	0/0:22,0:22:54.15:0,54,2010	0/0:33,0:33:60.18:0,60,2092	1/1:5,0:14:8.48:46,8,0	0/1:15,0:14:0.34:0,0,1	1/1:6,0:6:8.24:22,8,0
chr10	85538297	.	AAAGAAAGAAAGAAAGG	A	4721.80	PASS	AB=0.885;AC=30;AF=0.577;AN=52;BaseQRankSum=14.335;DP=488;FS=15.072;HRun=0;HaplotypeScore=211.7999;InbreedingCoeff=0.6607;MQ=53.03;MQ0=12;MQRankSum=-4.257;QD=15.53;ReadPosRankSum=-2.760;VQSLOD=2.3284;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:30.56:92,0,31	1/1:8,0:8:24.07:447,24,0	./.	./.	0/0:31,0:31:93.30:0,93,4252	0/0:17,0:17:51.11:0,51,2118	0/0:14,0:13:35.97:0,36,731	1/1:17,0:11:18.38:140,18,0	0/0:17,0:17:48.13:0,48,1922	1/1:4,24:28:75.04:1127,75,0	1/1:2,25:27:28.85:544,29,0	0/1:13,0:13:47.49:79,0,47	1/1:20,0:19:13.89:149,14,0	0/1:23,0:23:40.91:280,0,41	1/1:12,0:12:35.51:242,36,0	1/1:18,0:18:53.41:370,53,0	0/1:4,22:26:23.62:134,0,24	0/0:17,0:16:35.92:0,36,1318	1/1:14,0:10:5.54:112,6,0	1/1:18,0:17:29.69:215,30,0	1/1:7,0:7:14.81:105,15,0	0/0:11,0:11:29.31:0,29,1087	0/0:22,0:22:63.17:0,63,2799	0/0:25,0:24:69.19:0,69,2812	0/0:27,0:27:78.19:0,78,2643	1/1:17,0:17:41.60:293,42,0	1/1:17,0:16:37.93:250,38,0	1/1:9,0:9:17.92:142,18,0
chr10	85538301	.	AAAGAAAGAAAGG	A	2746.38	PASS	AB=1.000;AC=16;AF=0.308;AN=52;BaseQRankSum=11.677;DP=484;FS=17.078;HRun=0;HaplotypeScore=184.8199;InbreedingCoeff=-0.2147;MQ=53.03;MQ0=11;MQRankSum=-4.769;QD=10.44;ReadPosRankSum=-0.785;VQSLOD=1.3917;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:30:12.51:346,13,0	0/1:8,0:8:18.53:81,0,19	./.	./.	0/0:32,0:32:93.22:0,93,3383	0/0:17,0:17:48.11:0,48,1798	0/0:13,0:13:35.88:0,36,664	0/0:17,0:11:8.79:0,9,61	0/0:19,0:19:54.08:0,54,1710	0/1:25,0:25:36.96:413,0,37	0/1:26,0:26:99:134,0,105	0/1:12,0:12:22.92:215,0,23	0/1:20,0:19:8.90:407,0,9	0/1:22,0:22:40.02:714,0,40	0/1:12,0:12:61.89:62,0,71	0/1:18,0:18:99:102,0,144	0/1:23,0:23:4.84:87,0,5	0/0:19,0:18:27.34:0,27,1014	0/1:13,0:10:18.51:19,0,81	0/0:18,0:17:5.70:0,6,135	0/1:7,0:7:21.97:43,0,22	0/0:11,0:11:32.31:0,32,968	0/0:22,0:22:66.11:0,66,2294	0/0:25,0:24:69.13:0,69,2267	0/0:27,0:27:75.14:0,75,2198	0/1:19,0:19:76.49:118,0,76	0/1:19,0:18:78.10:159,0,78	0/1:9,0:9:1.33:1,0,81
chr10	85538309	.	AAAGGAAGG	A	2465.34	PASS	AB=1.000;AC=24;AF=0.444;AN=54;BaseQRankSum=10.558;DP=490;FS=10.254;HRun=0;HaplotypeScore=150.7941;InbreedingCoeff=0.1598;MQ=53.01;MQ0=8;MQRankSum=-8.699;QD=8.16;ReadPosRankSum=-1.351;VQSLOD=1.5748;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:7.41:110,7,0	0/1:7,0:7:36.34:36,0,51	0/0:2,0:1:3.01:0,3,49	./.	0/0:33,0:33:95.67:0,96,2794	0/0:15,0:15:45.15:0,45,1398	0/0:13,0:13:39.11:0,39,670	0/1:20,0:15:94.49:112,0,94	0/0:20,0:20:60.20:0,60,1620	0/1:24,0:24:32.50:33,0,80	0/1:26,0:26:81.70:96,0,82	0/1:14,0:14:60.99:61,0,157	0/1:21,0:20:75.95:94,0,76	0/1:24,0:24:99:173,0,231	1/1:14,0:14:24.55:348,25,0	1/1:17,0:17:27.09:364,27,0	0/1:23,0:23:11.13:42,0,11	0/0:18,0:17:6.19:0,6,837	0/1:14,0:12:49.30:96,0,49	1/1:8,10:17:3.01:42,3,0	1/1:4,0:4:9.03:116,9,0	0/0:14,0:14:42.06:0,42,983	0/0:23,0:23:69.23:0,69,2016	0/0:24,0:24:53.93:0,54,1940	0/0:26,0:26:75.24:0,75,1853	1/1:21,0:21:30.10:415,30,0	1/1:21,0:20:8.21:482,8,0	0/1:6,0:6:29.21:29,0,56
chr10	85539825	.	GGATGGAAGGAAGGA	G	474.07	PASS	AB=0.732;AC=2;AF=0.038;AN=52;BaseQRankSum=4.906;DP=230;FS=1.338;HRun=0;HaplotypeScore=96.0923;InbreedingCoeff=-0.0634;MQ=55.03;MQ0=9;MQRankSum=-3.834;QD=33.86;ReadPosRankSum=1.131;VQSLOD=2.4015;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:25.62:0,26,804	./.	0/0:17,0:3:8.99:0,9,188	0/0:15,0:4:12.04:0,12,502	0/0:9,0:9:27.08:0,27,1265	0/0:12,0:12:9.98:0,10,1676	0/0:12,0:12:36.12:0,36,1908	0/0:14,0:14:39.13:0,39,1590	0/0:10,0:10:30.10:0,30,1557	0/0:6,0:6:18.06:0,18,847	0/0:1,0:1:3.01:0,3,43	0/0:14,0:14:42.14:0,42,2442	0/0:9,0:9:27.09:0,27,1559	0/0:16,0:16:48.16:0,48,2870	0/1:3,2:5:26.54:206,0,27	0/1:6,3:9:76.52:356,0,77	0/0:4,0:4:12.04:0,12,394	0/0:10,0:10:30:0,30,1437	0/0:4,0:2:6.02:0,6,314	0/0:2,0:2:6.02:0,6,250	0/0:6,0:6:18.01:0,18,649	0/0:7,0:7:21.07:0,21,987	0/0:6,0:6:15.04:0,15,581	0/0:8,0:8:24.08:0,24,1398	0/0:6,0:6:18.06:0,18,917	0/0:6,0:6:18.06:0,18,941	0/0:10,0:10:30.05:0,30,1225	./.
chr10	85539839	.	A	AAGGGAGGG	257.76	PASS	AB=1.000;AC=11;AF=0.275;AN=40;BaseQRankSum=1.843;DP=219;FS=3.496;HRun=0;HaplotypeScore=68.9643;InbreedingCoeff=0.6125;MQ=54.26;MQ0=10;MQRankSum=-2.315;QD=6.29;ReadPosRankSum=-4.270;VQSLOD=0.0789;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,3:9:4.26:95,4,0	./.	./.	0/0:13,0:4:5.88:0,6,43	0/0:7,0:6:9.02:0,9,153	0/0:11,0:11:30.09:0,30,669	0/0:10,0:10:21.06:0,21,478	1/1:10,0:10:7.23:62,7,0	0/0:12,0:12:30.06:0,30,577	./.	./.	0/0:14,0:14:12.04:0,12,300	0/0:11,0:10:18.06:0,18,429	0/0:17,0:17:42.11:0,42,874	0/1:4,0:4:14.99:15,0,50	0/0:10,0:10:17.33:0,17,162	1/1:4,0:4:5.99:49,6,0	0/0:13,0:13:22.59:0,23,409	./.	./.	1/1:8,0:8:7.84:112,8,0	0/0:5,0:5:3.01:0,3,76	0/0:6,0:6:8.94:0,9,112	0/0:14,0:14:23.11:0,23,473	0/0:5,0:5:9.03:0,9,203	./.	1/1:6,0:6:3.01:58,3,0	./.
chr10	85540182	.	GAGAA	G	6997.91	PASS	AB=0.538;AC=35;AF=0.625;AN=56;BaseQRankSum=6.561;DP=414;FS=4.241;HRun=0;HaplotypeScore=75.4568;InbreedingCoeff=0.8378;MQ=65.38;MQ0=6;MQRankSum=-5.866;QD=26.92;ReadPosRankSum=1.467;VQSLOD=4.5725;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,11:12:15.52:269,16,0	1/1:1,2:2:3.01:54,3,0	0/0:25,0:13:38.61:0,39,587	0/0:19,0:16:23.37:0,23,373	0/0:11,0:10:30.03:0,30,679	0/0:14,0:13:42.14:0,42,913	1/1:24,0:24:9.03:159,9,0	1/1:3,22:22:51.10:730,51,0	0/0:12,0:12:33.10:0,33,683	1/1:1,9:10:27.08:441,27,0	1/1:1,5:6:15.05:253,15,0	1/1:16,0:16:13.41:148,13,0	1/1:15,0:14:9:103,9,0	1/1:8,0:8:7.42:112,7,0	1/1:2,20:21:42.14:745,42,0	1/1:0,16:14:24.08:427,24,0	1/1:5,14:18:40.36:667,40,0	0/0:15,0:14:33.09:0,33,716	1/1:5,10:13:32.94:536,33,0	1/1:4,5:9:21.06:371,21,0	1/1:3,3:4:3.01:54,3,0	0/0:14,0:13:29.05:0,29,588	0/0:12,0:11:24.08:0,24,589	0/0:21,0:20:42.45:0,42,914	0/0:10,0:10:30.10:0,30,692	1/1:4,9:12:33.02:482,33,0	1/1:9,22:30:79.94:1368,80,0	0/1:1,6:6:46.65:81,0,47
chr10	85540184	.	GAA	G	1219.74	PASS	AB=0.974;AC=23;AF=0.411;AN=56;BaseQRankSum=10.328;DP=409;FS=0.452;HRun=3;HaplotypeScore=83.8375;InbreedingCoeff=0.3339;MQ=65.46;MQ0=5;MQRankSum=-6.333;QD=5.62;ReadPosRankSum=3.611;VQSLOD=-0.1562;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,2:12:2.24:52,0,2	0/1:3,0:2:8.11:8,0,21	0/0:23,0:13:37.23:0,37,570	0/0:19,0:15:12.72:0,13,394	0/0:12,0:11:30.03:0,30,519	0/0:14,0:13:42.14:0,42,809	0/0:23,0:23:2.98:0,3,20	0/1:23,0:20:38.57:93,0,39	0/0:11,0:11:33.10:0,33,605	1/1:10,0:10:7.78:82,8,0	0/1:6,0:6:9.71:41,0,10	0/1:15,0:15:13.52:14,0,64	0/0:15,0:14:12.61:0,13,78	0/1:9,0:9:9.25:9,0,18	1/1:22,0:21:18.09:173,18,0	1/1:16,0:14:22.52:107,23,0	1/1:17,0:16:3.07:126,3,0	0/0:16,0:15:35.99:0,36,655	0/1:13,2:13:17.89:113,0,18	1/1:9,0:9:19.42:92,19,0	0/1:6,0:4:8.10:8,0,18	0/0:15,0:14:35.11:0,35,563	0/0:12,0:11:24.03:0,24,463	0/0:20,0:19:39.61:0,40,753	0/0:12,0:12:36.09:0,36,619	1/1:12,1:12:15.91:132,16,0	1/1:30,1:30:56.10:336,56,0	0/1:7,0:6:23.05:23,0,37
chr10	85540186	.	A	AAGAG	5979.49	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=5.841;DP=415;FS=4.122;HRun=0;HaplotypeScore=84.6953;InbreedingCoeff=0.7923;MQ=63.56;MQ0=7;MQRankSum=-7.525;QD=22.82;ReadPosRankSum=1.219;VQSLOD=4.4030;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:12:15.93:245,16,0	1/1:3,0:2:3:29,3,0	0/0:22,0:13:38.74:0,39,537	0/0:17,0:13:22.59:0,23,345	0/0:12,0:11:29.77:0,30,511	0/0:14,0:13:42.14:0,42,790	1/1:2,22:25:11.99:261,12,0	1/1:22,0:19:51.09:680,51,0	0/0:11,0:11:33.10:0,33,558	1/1:10,0:10:27.05:322,27,0	1/1:7,0:7:14.83:188,15,0	1/1:2,12:14:15.05:346,15,0	1/1:1,13:13:9.03:242,9,0	1/1:2,8:10:9.03:216,9,0	1/1:21,0:20:42.06:606,42,0	1/1:18,0:16:25.31:390,25,0	0/1:18,0:17:4.22:379,0,4	0/0:16,0:15:33.02:0,33,577	1/1:13,1:12:15.87:373,16,0	1/1:10,0:10:22.31:325,22,0	1/1:4,0:2:3.01:54,3,0	0/0:16,0:15:32.02:0,32,449	0/0:13,0:12:24.08:0,24,448	0/0:20,0:19:41.46:0,41,731	0/0:12,0:12:36.09:0,36,611	1/1:15,0:14:35.92:408,36,0	1/1:33,0:32:62.23:863,62,0	0/1:8,0:6:25.57:56,0,26
chr10	85540214	.	AAG	A	1405.58	PASS	AB=0.934;AC=21;AF=0.404;AN=52;BaseQRankSum=3.112;DP=413;FS=0.642;HRun=0;HaplotypeScore=88.3562;InbreedingCoeff=0.1655;MQ=42.52;MQ0=30;MQRankSum=-5.506;QD=5.28;ReadPosRankSum=-1.032;VQSLOD=2.8441;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:14:7.76:40,8,0	0/0:3,0:2:0:0,0,0	./.	./.	0/1:17,0:14:24.82:76,0,25	0/0:8,0:6:6.02:0,6,85	0/1:22,0:19:21.62:22,0,32	1/1:19,3:17:0.06:143,0,0	0/0:11,0:10:24.08:0,24,337	0/0:14,0:13:11.55:0,12,64	0/1:9,0:8:5.49:5,0,35	0/1:14,0:14:7.35:7,0,40	0/0:14,0:12:3.68:0,4,20	0/0:13,0:13:2.99:0,3,24	0/1:24,0:22:8.44:8,0,93	0/1:16,0:14:24.74:60,0,25	0/0:21,0:17:14.32:0,14,206	0/0:12,0:10:9.53:0,10,34	0/1:10,5:12:0.52:92,0,1	1/1:7,5:11:12.03:134,12,0	0/0:6,0:3:3:0,3,28	0/1:14,2:14:7.15:7,0,241	1/1:7,7:13:9.03:101,9,0	0/0:22,0:16:9.50:0,9,118	0/0:17,0:17:6.48:0,6,382	1/1:13,5:14:20.93:201,21,0	1/1:17,17:33:32.19:582,32,0	0/1:7,3:8:31.60:85,0,32
chr10	85540248	.	GAA	G	1160.67	PASS	AB=0.978;AC=26;AF=0.500;AN=52;BaseQRankSum=3.228;DP=418;FS=5.448;HRun=3;HaplotypeScore=88.3221;InbreedingCoeff=-0.0148;MQ=36.13;MQ0=54;MQRankSum=-5.418;QD=3.83;ReadPosRankSum=0.723;VQSLOD=-0.6324;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:14:7.75:93,8,0	0/0:4,0:3:0:0,0,0	./.	./.	0/1:13,7:16:65.34:170,0,65	0/0:18,0:14:32.84:0,33,291	0/1:19,0:14:13.72:14,0,16	1/1:24,0:23:5.17:34,5,0	0/0:15,0:14:30.54:0,31,323	0/0:12,0:10:1.49:0,1,5	0/1:8,0:7:15.13:22,0,15	1/1:9,1:10:4.81:51,5,0	0/1:12,0:10:1.27:41,0,1	1/1:14,0:14:4.61:29,5,0	0/1:17,0:14:28.12:28,0,46	0/1:13,0:11:10.13:158,0,10	0/0:19,0:14:16.71:0,17,127	0/1:16,0:12:37.04:37,0,129	0/1:16,0:9:21.66:22,0,24	1/1:12,0:9:11.55:68,12,0	0/1:10,0:5:23.22:24,0,23	0/1:15,0:13:89.91:90,0,146	0/1:16,0:15:2.64:3,0,174	0/0:30,0:20:27.81:0,28,233	0/0:17,0:17:0.33:0,0,329	1/1:15,0:12:31.46:192,31,0	1/1:28,0:27:24.98:204,25,0	0/1:11,0:8:39.18:40,0,39
chr10	85540457	.	AG	A	8277.53	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.216;DP=603;FS=3.111;HRun=2;HaplotypeScore=59.2833;InbreedingCoeff=0.9594;MQ=81.43;MQ0=0;MQRankSum=-1.606;QD=36.30;ReadPosRankSum=0.417;VQSLOD=5.3157;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1481	0/0:6,0:6:18.06:0,18,270	0/0:19,0:19:48.77:0,49,682	0/0:19,0:19:51.16:0,51,712	0/0:28,0:27:81.27:0,81,1213	0/0:20,0:20:57.18:0,57,832	0/0:15,0:15:45.15:0,45,674	1/1:0,41:41:99:1567,123,0	0/0:16,0:16:48.15:0,48,699	0/0:23,0:23:69.23:0,69,1029	0/0:13,0:13:39.13:0,39,583	0/0:17,0:17:51.17:0,51,764	0/0:21,0:21:63.21:0,63,944	0/0:18,0:18:54.18:0,54,806	1/1:0,31:31:81.26:1051,81,0	1/1:0,23:23:66.21:857,66,0	0/0:19,0:19:54.10:0,54,784	0/0:22,0:22:66.22:0,66,987	1/1:0,25:25:75.23:959,75,0	1/1:0,21:21:63.20:818,63,0	1/1:0,18:18:54.18:701,54,0	0/0:24,0:24:66.22:0,66,989	0/0:18,0:18:54.18:0,54,809	0/0:24,0:24:69.23:0,69,1034	0/0:20,0:20:59.41:0,59,861	1/1:2,28:30:0.47:1001,0,0	1/1:0,27:27:69.22:896,69,0	1/1:0,12:12:33.11:429,33,0
chr10	85546422	.	AT	A	6351.21	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=9.347;DP=498;FS=5.648;HRun=10;HaplotypeScore=62.6274;InbreedingCoeff=0.9563;MQ=73.33;MQ0=3;MQRankSum=0.807;QD=19.19;ReadPosRankSum=3.551;VQSLOD=5.8963;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:83.98:729,84,0	1/1:2,5:7:8.99:78,9,0	0/0:26,0:16:23.99:0,24,316	0/0:21,0:16:32.50:0,33,269	0/0:23,0:23:54.15:0,54,597	0/0:20,0:20:54.15:0,54,597	0/0:16,0:16:42.11:0,42,464	1/1:8,22:30:65.95:570,66,0	0/0:14,0:14:39.09:0,39,416	1/1:2,19:21:56.73:481,57,0	1/1:3,18:21:23.80:434,24,0	1/1:1,13:14:29.99:260,30,0	1/1:0,10:10:26.99:234,27,0	1/1:3,14:17:20.98:182,21,0	1/1:1,14:15:23.99:208,24,0	1/1:1,19:20:38.99:339,39,0	1/1:2,29:31:46.29:527,46,0	0/0:17,0:16:38.83:0,39,400	1/1:7,14:21:41.97:362,42,0	1/1:0,18:18:50.99:441,51,0	1/1:0,11:11:26.99:234,27,0	0/0:1,0:1:3.01:0,3,33	0/0:8,0:8:18.05:0,18,198	0/0:12,0:12:10.08:0,10,339	0/0:9,0:9:27.07:0,27,297	1/1:2,23:25:68.96:594,69,0	1/1:3,23:26:50.98:442,51,0	1/1:1,10:11:26.99:234,27,0
chr10	85547303	.	TA	T	7852.86	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.394;DP=650;FS=3.150;HRun=1;HaplotypeScore=63.6696;InbreedingCoeff=0.9581;MQ=59.67;MQ0=9;MQRankSum=3.401;QD=37.04;ReadPosRankSum=0.845;VQSLOD=5.2161;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,154,2413	0/0:7,0:7:21.07:0,21,335	0/0:31,0:16:48.16:0,48,751	0/0:29,0:20:56.24:0,56,793	0/0:16,0:16:45.14:0,45,695	0/0:24,0:24:72.21:0,72,1099	0/0:14,0:14:42.14:0,42,668	1/1:0,24:24:72.22:966,72,0	0/0:25,0:25:75.26:0,75,1196	0/0:20,0:20:54.18:0,54,852	0/0:8,0:8:21.07:0,21,321	0/0:30,0:30:90.31:0,90,1438	0/0:18,0:18:54.17:0,54,837	0/0:21,0:21:63.21:0,63,998	1/1:0,35:35:90.04:1258,90,0	1/1:1,19:20:0.21:581,0,0	0/0:40,0:40:99:0,117,1812	0/0:32,0:32:90.31:0,90,1428	1/1:0,26:25:75.20:1001,75,0	1/1:0,21:21:48.06:626,48,0	1/1:0,31:31:90.30:1258,90,0	0/0:13,0:13:36.12:0,36,575	0/0:17,0:17:51.17:0,51,802	0/0:28,0:28:81.26:0,81,1258	0/0:14,0:14:42.14:0,42,660	1/1:0,13:13:39.13:545,39,0	1/1:0,22:22:63.21:881,63,0	1/1:2,18:20:56.59:735,57,0
chr10	85548168	.	A	ATG	1516.78	PASS	AB=0.756;AC=8;AF=0.154;AN=52;BaseQRankSum=-5.893;DP=621;FS=0.000;HRun=0;HaplotypeScore=105.7637;InbreedingCoeff=0.1076;MQ=65.00;MQ0=15;MQRankSum=2.846;QD=9.08;ReadPosRankSum=-0.735;VQSLOD=3.0935;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:28:11.36:0,11,56	0/1:8,7:17:29.04:162,0,29	0/1:30,0:12:0:0,0,0	./.	0/0:24,0:24:12.01:0,12,123	0/0:17,0:19:26.72:0,27,249	0/0:14,0:16:2.84:0,3,14	0/0:24,0:27:8.52:0,9,42	0/0:18,0:18:23.89:0,24,244	0/0:26,0:26:14.13:0,14,151	0/1:21,8:29:38.66:287,0,39	0/1:11,11:23:9.04:291,0,9	1/1:12,8:21:3.55:327,4,0	0/1:15,7:24:41.92:204,0,42	0/0:27,0:27:48.13:0,48,527	0/0:14,0:17:17.69:0,18,150	0/1:11,11:21:62.72:368,0,63	0/0:20,0:23:35.56:0,36,327	0/0:14,0:16:6.15:0,6,28	0/0:14,0:27:28.41:0,28,140	0/0:14,0:21:8.46:0,8,42	0/0:16,0:19:29.69:0,30,263	0/0:19,0:22:14.26:0,14,136	0/0:29,0:30:41.94:0,42,442	0/0:10,0:10:11.38:0,11,93	0/0:12,0:20:21.98:0,22,114	0/0:14,0:22:27.44:0,27,128	./.
chr10	85548409	.	GA	G	1690.98	PASS	AB=0.904;AC=16;AF=0.286;AN=56;BaseQRankSum=-1.618;DP=564;FS=2.619;HRun=11;HaplotypeScore=74.4678;InbreedingCoeff=0.7429;MQ=72.93;MQ0=10;MQRankSum=0.314;QD=8.99;ReadPosRankSum=1.304;VQSLOD=2.7924;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.09:0,72,720	1/1:0,8:8:23.97:196,24,0	0/1:61,1:28:27.69:28,0,269	0/0:50,4:18:28.81:0,29,208	0/0:25,0:26:47.34:0,47,661	0/0:9,1:10:2.46:0,2,223	0/1:11,3:14:38.10:38,0,194	0/0:35,1:36:56.51:0,57,763	0/0:12,0:12:27.07:0,27,286	1/1:4,15:19:16.24:335,16,0	1/1:3,14:17:35.94:295,36,0	1/1:4,10:14:26.96:222,27,0	1/1:1,11:12:26.71:221,27,0	1/1:4,9:14:17.01:129,17,0	0/0:18,0:18:23.54:0,24,439	0/0:11,0:11:30.07:0,30,312	1/1:5,22:28:52.95:424,53,0	0/0:20,0:21:29.55:0,30,474	0/0:20,0:20:26.10:0,26,429	0/0:17,0:17:39.07:0,39,396	0/0:15,1:17:8.30:0,8,267	0/0:7,0:7:15.04:0,15,158	0/0:16,0:16:44.68:0,45,442	0/0:17,0:17:44.93:0,45,445	0/0:20,0:20:53.98:0,54,537	0/0:20,0:21:44.81:0,45,436	0/0:16,0:17:35.22:0,35,393	0/0:8,0:8:0.81:0,1,162
chr10	85548756	.	C	CGT	1612.67	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=12.954;DP=531;FS=7.768;HRun=0;HaplotypeScore=85.8837;InbreedingCoeff=0.6163;MQ=63.46;MQ0=19;MQRankSum=-2.307;QD=7.04;ReadPosRankSum=2.342;VQSLOD=1.9506;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,30:35:63.22:1069,63,0	0/0:11,0:10:30.10:0,30,489	0/0:14,0:13:39.12:0,39,611	0/0:19,0:18:48.13:0,48,750	0/0:20,0:18:54.17:0,54,849	0/0:15,0:14:42.13:0,42,661	0/0:21,0:21:54.18:0,54,880	0/0:19,0:18:10.27:0,10,188	0/0:16,0:15:42.14:0,42,682	0/0:28,0:28:81.28:0,81,1312	0/0:12,0:12:30.10:0,30,489	1/1:17,0:15:18.78:79,19,0	1/1:21,0:19:9.89:97,10,0	1/1:17,0:15:24.76:108,25,0	0/1:23,0:23:2.63:75,0,3	0/1:16,0:14:26.22:66,0,26	0/0:35,0:33:66.24:0,66,1302	0/0:31,0:30:81.28:0,81,1315	0/1:13,0:13:23.26:23,0,96	1/1:17,0:17:19.34:67,19,0	1/1:19,0:17:28.60:106,29,0	0/0:10,0:10:30.10:0,30,489	0/0:17,0:17:48.16:0,48,778	0/0:14,0:14:39.13:0,39,636	0/0:20,0:19:57.19:0,57,930	0/1:26,0:25:35.20:35,0,96	0/1:12,0:12:22.13:23,0,22	1/1:10,0:10:18.54:64,19,0
chr10	85548757	.	A	ATC	8992.82	PASS	AB=0.615;AC=25;AF=0.446;AN=56;BaseQRankSum=-9.901;DP=550;FS=2.589;HRun=0;HaplotypeScore=62.9096;InbreedingCoeff=0.9311;MQ=64.32;MQ0=19;MQRankSum=-0.362;QD=34.59;ReadPosRankSum=0.874;VQSLOD=7.0468;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:36:63.22:1121,63,0	0/0:11,0:10:30.10:0,30,420	0/0:15,0:14:39.13:0,39,545	0/0:19,0:18:47.95:0,48,643	0/0:21,0:19:54.18:0,54,753	0/0:16,0:15:42.14:0,42,587	0/0:21,0:21:57.17:0,57,779	1/1:5,14:18:42.14:731,42,0	0/0:18,0:17:42.14:0,42,588	0/0:28,0:28:78.25:0,78,1078	0/0:12,0:12:30.10:0,30,420	1/1:4,14:16:27.09:486,27,0	1/1:4,16:18:39.13:702,39,0	1/1:2,15:15:36.12:648,36,0	1/1:3,22:25:48.16:864,48,0	0/1:6,10:14:11.92:456,0,12	0/0:34,1:33:33.42:0,33,1102	0/0:31,0:30:81.27:0,81,1134	1/1:3,10:13:30.10:540,30,0	1/1:4,13:17:30.10:540,30,0	1/1:3,19:20:42.14:756,42,0	0/0:11,0:11:30.10:0,30,420	0/0:17,0:17:48.16:0,48,668	0/0:15,0:15:39.13:0,39,546	0/0:20,0:19:57.19:0,57,798	1/1:5,24:29:72.21:1232,72,0	1/1:5,9:14:24.08:432,24,0	1/1:1,9:10:27.09:486,27,0
chr10	85551339	.	T	TAATG	3611.20	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.938;DP=660;FS=0.554;HRun=0;HaplotypeScore=100.1500;InbreedingCoeff=0.9859;MQ=85.32;MQ0=0;MQRankSum=-2.775;QD=58.25;ReadPosRankSum=0.207;VQSLOD=5.1469;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,2169	0/0:14,0:14:39.13:0,39,709	0/0:24,0:24:54.18:0,54,916	0/0:18,0:18:10.93:0,11,663	0/0:24,0:24:72.25:0,72,1282	0/0:21,0:21:57.19:0,57,1008	0/0:23,0:23:69.24:0,69,1241	0/0:27,0:27:75.24:0,75,1283	0/0:24,0:24:72.25:0,72,1295	0/0:30,0:30:75.26:0,75,1364	0/0:18,0:18:45.14:0,45,789	1/1:4,15:19:48.16:1163,48,0	1/1:3,12:17:39.13:988,39,0	1/1:2,23:26:57.20:1460,57,0	0/0:33,0:33:96.33:0,96,1731	0/0:24,0:24:69.22:0,69,1211	0/0:38,0:38:98.95:0,99,1754	0/0:20,0:20:54.19:0,54,981	0/0:25,0:25:72.25:0,72,1297	0/0:22,0:22:60.21:0,60,1064	0/0:15,0:15:42.14:0,42,764	0/0:25,0:25:69.24:0,69,1255	0/0:22,0:22:63.22:0,63,1145	0/0:28,0:28:81.28:0,81,1473	0/0:15,0:16:42.12:0,42,721	0/0:26,0:26:75.26:0,75,1364	0/0:25,0:23:60.21:0,60,1091	0/0:11,0:11:30.06:0,30,483
chr10	85552506	.	G	GT	614.52	PASS	AB=0.938;AC=7;AF=0.125;AN=56;BaseQRankSum=-4.382;DP=569;FS=0.000;HRun=11;HaplotypeScore=67.4748;InbreedingCoeff=0.1933;MQ=80.30;MQ0=0;MQRankSum=-2.866;QD=4.30;ReadPosRankSum=0.486;VQSLOD=0.5889;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,33:38:66.13:670,66,0	0/0:5,0:5:11.94:0,12,93	0/1:16,0:14:6.99:7,0,64	0/1:29,0:26:0.40:0,0,77	0/0:18,0:18:38.78:0,39,293	0/0:31,0:31:69.53:0,70,556	0/0:17,0:17:41.32:0,41,307	0/0:27,1:30:24.35:0,24,346	0/0:23,0:23:41.69:0,42,322	0/0:18,0:18:38.65:0,39,291	0/1:14,2:17:27.53:28,0,138	0/0:16,1:17:2.38:0,2,200	0/0:22,0:22:53.75:0,54,418	0/0:10,0:10:17.85:0,18,135	0/0:24,0:24:56.63:0,57,429	0/0:22,1:25:30.35:0,30,389	0/0:28,1:32:48.30:0,48,537	0/0:18,0:20:43.80:0,44,328	0/0:25,0:25:43.72:0,44,322	0/0:20,0:20:26.92:0,27,348	0/0:16,0:18:31.91:0,32,238	0/0:11,0:11:17.25:0,17,124	0/0:19,0:19:13.74:0,14,241	0/0:15,2:17:14.39:0,14,294	0/0:19,0:20:40.81:0,41,305	0/1:18,2:20:25.69:26,0,182	0/1:19,3:23:7.18:7,0,298	0/0:4,0:4:8.93:0,9,67
chr10	85553139	.	A	AC	19460.61	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-17.849;DP=696;FS=0.596;HRun=0;HaplotypeScore=60.2645;InbreedingCoeff=0.9999;MQ=80.41;MQ0=0;MQRankSum=-2.156;QD=43.54;ReadPosRankSum=2.949;VQSLOD=5.3907;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:56.86:873,57,0	1/1:1,13:14:36.12:575,36,0	0/0:17,0:17:48.11:0,48,619	0/0:16,0:16:38.50:0,39,412	0/0:28,0:28:84.28:0,84,1173	0/0:24,0:24:72.22:0,72,988	0/0:12,0:12:36.12:0,36,502	1/1:0,27:27:81.24:1227,81,0	0/0:26,0:26:78.24:0,78,1071	1/1:0,37:37:99:1768,111,0	1/1:0,23:23:66.22:1029,66,0	1/1:2,22:24:66.16:1025,66,0	1/1:0,30:30:78.27:1247,78,0	1/1:0,25:25:57.19:911,57,0	1/1:0,40:40:99:1726,108,0	1/1:0,26:26:75.26:1199,75,0	1/1:0,17:17:48.16:767,48,0	0/0:25,0:25:68.78:0,69,940	1/1:0,22:22:63.18:957,63,0	1/1:0,23:23:60.20:959,60,0	1/1:0,27:27:72.25:1151,72,0	0/0:24,0:24:72.24:0,72,1000	0/0:28,0:28:84.28:0,84,1174	0/0:29,0:29:87.29:0,87,1216	0/0:20,0:20:60.20:0,60,838	1/1:0,38:38:99:1795,114,0	1/1:0,41:41:99:1630,102,0	1/1:0,13:13:39.13:623,39,0
chr10	85554495	.	CTT	C	401.84	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=3.716;DP=383;FS=9.833;HRun=11;HaplotypeScore=53.5843;InbreedingCoeff=0.5747;MQ=78.55;MQ0=0;MQRankSum=-0.858;QD=10.30;ReadPosRankSum=0.571;VQSLOD=0.4887;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:19:45.11:479,45,0	0/0:5,0:5:12.02:0,12,163	0/1:20,0:13:28.81:29,0,65	0/0:11,0:7:10.82:0,11,76	0/0:13,0:13:33.10:0,33,487	0/0:15,0:16:38.88:0,39,629	0/0:6,0:7:21.07:0,21,306	0/0:23,0:25:53.64:0,54,737	0/0:7,0:7:18.06:0,18,277	0/0:25,0:25:48.14:0,48,700	0/0:16,0:16:42.14:0,42,644	0/0:22,0:25:64.72:0,65,838	0/0:5,0:5:12.04:0,12,184	0/0:8,0:8:18.06:0,18,277	0/0:11,0:11:24.02:0,24,321	0/0:12,0:13:39.13:0,39,582	0/0:15,0:15:33.10:0,33,487	0/0:22,0:23:47.22:0,47,644	0/0:14,0:15:36.12:0,36,537	0/0:11,0:11:27.08:0,27,378	0/0:11,0:11:21.07:0,21,323	0/0:10,0:10:27.07:0,27,376	0/0:12,0:12:21.04:0,21,272	0/0:5,0:6:17.55:0,18,239	0/0:16,0:17:41.61:0,42,588	0/0:13,0:13:33.11:0,33,507	0/0:17,0:18:39.11:0,39,560	0/0:5,0:5:12.04:0,12,185
chr10	85554552	.	G	GT	5177.49	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-4.680;DP=384;FS=0.892;HRun=8;HaplotypeScore=42.1577;InbreedingCoeff=0.9738;MQ=66.88;MQ0=4;MQRankSum=1.710;QD=29.59;ReadPosRankSum=0.007;VQSLOD=4.6085;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:51.50:0,51,468	1/1:1,3:4:6.02:69,6,0	0/0:25,0:14:22.15:0,22,201	0/0:20,0:13:26.72:0,27,230	0/0:16,0:16:45.02:0,45,411	0/0:10,0:10:30.02:0,30,274	0/0:4,0:4:12.01:0,12,110	1/1:4,11:15:33.05:350,33,0	0/0:11,0:11:24.01:0,24,220	1/1:3,22:24:66.20:762,66,0	1/1:0,14:14:39.12:450,39,0	0/0:17,0:17:51.03:0,51,466	0/0:7,0:6:18.01:0,18,164	0/0:7,0:7:21.01:0,21,192	1/1:1,8:9:21.06:242,21,0	1/1:2,14:16:42.12:485,42,0	1/1:1,13:14:39.12:450,39,0	0/0:19,0:19:42.02:0,42,384	1/1:2,10:12:27.05:299,27,0	1/1:1,18:19:54.16:623,54,0	1/1:0,7:7:21.06:242,21,0	0/0:12,0:12:33.01:0,33,302	0/0:9,0:9:27.01:0,27,247	0/0:6,0:6:15:0,15,137	0/0:23,0:23:66.04:0,66,604	1/1:2,11:13:33.10:381,33,0	1/1:1,15:16:17.69:457,18,0	1/1:0,10:11:33.07:367,33,0
chr10	85556926	.	C	CT	7181.14	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-15.714;DP=719;FS=1.350;HRun=8;HaplotypeScore=68.9074;InbreedingCoeff=0.9918;MQ=77.21;MQ0=0;MQRankSum=-0.056;QD=27.41;ReadPosRankSum=-1.223;VQSLOD=5.0558;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,132,1192	0/0:12,0:12:27:0,27,247	0/0:18,0:18:11.45:0,11,205	0/0:21,0:21:39.89:0,40,339	0/0:36,0:36:99:0,102,915	0/0:30,0:30:81.03:0,81,738	0/0:19,0:19:51.01:0,51,463	1/1:12,35:47:99:1167,102,0	0/0:22,0:22:57.03:0,57,521	0/0:38,0:38:87.03:0,87,796	0/0:20,0:20:48:0,48,433	0/0:20,0:20:60.03:0,60,549	0/0:20,0:20:57.03:0,57,521	0/0:19,0:19:42.02:0,42,385	1/1:3,17:20:42.12:485,42,0	1/1:5,31:36:84.25:969,84,0	0/0:25,0:25:63.03:0,63,577	0/0:11,0:11:30:0,30,271	1/1:4,25:29:75.19:843,75,0	1/1:0,31:31:90.18:1009,90,0	1/1:4,28:32:47.70:788,48,0	0/0:31,0:31:69.02:0,69,631	0/0:24,0:24:66.01:0,66,599	0/0:25,0:25:60.02:0,60,549	0/0:18,0:18:51.01:0,51,461	1/1:4,23:27:69.19:787,69,0	1/1:2,32:34:84.24:960,84,0	1/1:0,6:6:15.04:173,15,0
chr10	85559254	.	A	AACTT	1181.78	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.001;DP=643;FS=8.325;HRun=0;HaplotypeScore=99.4254;InbreedingCoeff=0.9901;MQ=95.28;MQ0=0;MQRankSum=-2.296;QD=51.38;ReadPosRankSum=2.553;VQSLOD=4.8333;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:51.13:1277,51,0	0/0:9,0:9:27.09:0,27,474	0/0:35,0:35:87.28:0,87,1456	0/0:26,0:26:69.19:0,69,1125	0/0:22,0:22:66.19:0,66,1101	0/0:26,0:25:69.22:0,69,1213	0/0:11,0:11:27.09:0,27,491	0/0:44,0:44:99:0,114,1966	0/0:24,0:24:63.22:0,63,1119	0/0:33,0:33:93.28:0,93,1544	0/0:16,0:16:48.16:0,48,872	0/0:24,0:24:69.24:0,69,1231	0/0:27,0:27:78.25:0,78,1388	0/0:29,0:29:81.25:0,81,1391	0/0:23,0:23:63.21:0,63,1105	0/0:22,0:22:63.19:0,63,1085	0/0:20,0:20:60.16:0,60,1027	0/0:21,0:21:63.20:0,63,1096	0/0:25,0:25:69.23:0,69,1216	0/0:18,0:18:48.16:0,48,867	0/0:23,0:23:69.24:0,69,1248	0/0:21,0:21:63.22:0,63,1140	0/0:20,0:20:57.18:0,57,993	0/0:20,0:20:57.15:0,57,995	0/0:17,0:17:48.16:0,48,830	0/0:27,0:27:75.26:0,75,1363	0/0:31,0:31:84.29:0,84,1519	0/0:6,0:6:18.06:0,18,307
chr10	85559766	.	T	TG	1775.04	PASS	AB=0.903;AC=18;AF=0.321;AN=56;BaseQRankSum=-1.615;DP=599;FS=3.788;HRun=0;HaplotypeScore=108.7726;InbreedingCoeff=-0.2246;MQ=67.43;MQ0=24;MQRankSum=-0.207;QD=5.41;ReadPosRankSum=-0.626;VQSLOD=3.3940;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,1:22:62.51:63,0,81	0/1:6,0:6:15.47:47,0,15	0/0:74,0:20:34.50:0,35,272	0/0:62,0:20:17.88:0,18,111	0/0:24,0:23:64.10:0,64,599	0/0:14,0:14:30.31:0,30,281	0/0:10,0:8:23.15:0,23,206	0/1:24,8:30:35.49:320,0,35	0/0:10,0:10:20.79:0,21,201	0/1:23,1:24:18.95:75,0,19	1/1:20,1:21:1.55:143,2,0	0/0:12,0:12:9.25:0,9,140	0/1:8,0:8:6.66:7,0,71	0/1:22,1:23:19.30:19,0,113	0/1:13,0:13:28.71:31,0,29	0/1:21,0:21:18.76:50,0,19	0/1:35,2:37:92.95:164,0,93	0/0:15,0:13:31.58:0,32,308	0/1:20,5:24:99:207,0,154	0/1:18,8:24:77.41:217,0,77	0/1:7,1:8:20.81:21,0,34	0/0:8,0:8:23.93:0,24,236	0/0:19,0:19:57.03:0,57,591	0/0:14,0:13:35.08:0,35,356	0/0:9,0:9:21.51:0,22,233	0/1:14,9:21:43.43:311,0,43	0/1:24,7:29:99:197,0,137	1/1:5,1:6:3.25:64,3,0
chr10	85559771	.	GT	G	84.66	PASS	AB=0.977;AC=6;AF=0.107;AN=56;BaseQRankSum=4.951;DP=589;FS=6.103;HRun=16;HaplotypeScore=111.3951;InbreedingCoeff=0.5220;MQ=64.35;MQ0=23;MQRankSum=1.681;QD=0.53;ReadPosRankSum=-0.908;VQSLOD=-0.1020;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:47.09:0,47,514	0/0:7,0:7:18.02:0,18,207	0/1:67,1:17:11.44:11,0,108	0/1:58,2:18:22:22,0,46	0/0:24,0:23:50.34:0,50,512	0/0:13,0:13:26.64:0,27,236	0/0:10,0:8:17.24:0,17,167	0/0:30,0:28:18.59:0,19,110	0/0:13,0:13:26.53:0,27,248	0/0:25,0:25:71.95:0,72,908	0/0:21,0:21:59.52:0,60,712	0/0:10,0:10:26.66:0,27,241	0/0:9,0:9:20.69:0,21,133	0/0:24,0:24:37.32:0,37,447	1/1:6,5:11:17.38:96,17,0	1/1:8,14:22:5.76:79,6,0	0/0:36,0:36:82.05:0,82,966	0/0:15,0:13:25.98:0,26,184	0/0:25,0:24:27.55:0,28,144	0/0:27,0:25:41.98:0,42,239	0/0:8,0:8:2.22:0,2,11	0/0:8,0:8:15.41:0,15,152	0/0:17,0:17:34.22:0,34,393	0/0:14,0:13:25.96:0,26,204	0/0:8,0:8:17.07:0,17,170	0/0:25,0:23:34.49:0,34,212	0/0:28,0:26:36.78:0,37,226	0/0:7,0:6:0.47:0,0,2
chr10	85559791	.	T	TG	2821.64	PASS	AB=0.953;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.555;DP=542;FS=43.139;HRun=0;HaplotypeScore=86.5618;InbreedingCoeff=0.1862;MQ=58.59;MQ0=18;MQRankSum=1.978;QD=10.94;ReadPosRankSum=4.613;VQSLOD=1.8063;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:50.51:0,51,373	1/1:0,6:6:17.94:183,18,0	0/0:52,0:14:30.58:0,31,251	0/0:46,0:11:18.77:0,19,146	0/0:22,0:21:56.01:0,56,521	0/0:11,0:11:24.87:0,25,245	0/0:9,0:8:20.92:0,21,167	0/1:27,1:26:58.78:312,0,59	0/0:14,0:14:27.94:0,28,223	1/1:4,14:21:33.40:431,33,0	1/1:1,19:21:28.28:409,28,0	0/0:12,0:12:25.51:0,26,181	0/0:11,0:11:32.52:0,33,223	0/0:20,0:20:35.58:0,36,245	0/1:11,0:11:8.24:68,0,8	0/1:24,0:24:10.58:119,0,11	0/1:12,16:34:45.48:407,0,45	0/0:11,0:10:26.90:0,27,239	0/1:21,0:21:82.99:213,0,83	0/1:33,0:31:50.77:355,0,51	0/1:7,0:7:16.51:51,0,17	0/0:7,0:7:20.17:0,20,167	0/0:21,0:21:56.72:0,57,564	0/0:11,0:10:26.94:0,27,242	0/0:10,0:10:23.16:0,23,176	0/1:24,0:22:99:132,0,190	0/1:28,0:27:84.67:316,0,85	0/0:3,0:2:2.92:0,3,17
chr10	85560924	.	A	AAAAGCATAAACACACAGAAGAGAC	132031.20	PASS	AB=0.758;AC=35;AF=0.625;AN=56;BaseQRankSum=4.863;DP=873;FS=3.425;HRun=0;HaplotypeScore=470.3982;InbreedingCoeff=0.9144;MQ=75.29;MQ0=0;MQRankSum=-21.748;QD=223.03;ReadPosRankSum=0.235;VQSLOD=4.3503;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,6:32:69.24:6217,69,0	1/1:15,0:16:45.15:2978,45,0	0/0:21,0:21:60.21:0,60,2743	0/0:32,0:32:93.29:0,93,3892	0/0:28,0:28:84.27:0,84,5138	0/0:33,0:33:99:0,99,5684	1/1:37,0:37:99:8319,102,0	1/1:42,0:42:99:7798,120,0	0/0:30,0:30:90.29:0,90,5034	1/1:28,11:42:99:11333,126,0	1/1:23,7:33:81.23:6501,81,0	1/1:25,9:35:99:8414,102,0	1/1:23,7:37:90.31:8562,90,0	1/1:23,13:41:99:8903,99,0	1/1:31,14:47:99:11981,132,0	0/1:34,14:49:55.24:12739,0,55	1/1:15,2:21:42.14:3998,42,0	0/0:20,0:20:54.18:0,54,3276	1/1:24,3:32:90.22:6378,90,0	1/1:21,11:35:99:8946,99,0	1/1:11,1:15:18.02:1140,18,0	0/0:34,0:34:99:0,102,6172	0/0:35,0:35:99:0,102,5650	0/0:18,0:18:51.17:0,51,3055	0/0:30,0:30:90.27:0,90,5187	1/1:22,6:33:90.31:6757,90,0	1/1:26,11:41:99:10199,105,0	1/1:1,1:3:9.03:867,9,0
chr10	85562229	.	TA	T	1332.05	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.738;DP=457;FS=5.946;HRun=10;HaplotypeScore=44.9841;InbreedingCoeff=0.8756;MQ=63.91;MQ0=4;MQRankSum=1.141;QD=18.25;ReadPosRankSum=0.787;VQSLOD=4.0089;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.14:0,66,714	1/1:0,6:6:15:130,15,0	0/0:8,0:5:8.76:0,9,78	0/0:9,0:6:11.92:0,12,102	0/0:23,1:24:40.11:0,40,660	0/0:15,0:15:42.11:0,42,465	0/0:12,0:12:30.08:0,30,332	0/0:34,0:34:93.08:0,93,1010	0/0:8,1:9:1.02:0,1,239	1/1:6,18:23:53.98:469,54,0	1/1:3,15:18:44.85:370,45,0	0/0:23,0:23:57.04:0,57,607	0/0:12,1:13:10.05:0,10,339	0/0:18,0:18:45.11:0,45,489	0/0:18,0:18:51.11:0,51,547	0/0:24,0:24:66.18:0,66,728	1/1:2,23:25:59.98:521,60,0	0/0:15,0:15:42.11:0,42,458	0/0:11,0:10:21.06:0,21,232	0/0:16,1:17:22.03:0,22,458	0/0:16,0:16:45.10:0,45,488	0/0:6,0:6:9.02:0,9,100	0/0:18,0:18:45.12:0,45,498	0/0:11,0:11:27.05:0,27,289	0/0:14,0:14:33.09:0,33,365	0/0:21,0:21:54.06:0,54,572	0/0:20,0:21:60:0,60,644	0/0:4,0:4:12.03:0,12,133
chr10	85563056	.	TTTTTC	T	1533.38	PASS	AB=0.988;AC=18;AF=0.333;AN=54;BaseQRankSum=5.818;DP=561;FS=51.059;HRun=0;HaplotypeScore=85.1482;InbreedingCoeff=0.5657;MQ=56.16;MQ0=24;MQRankSum=-0.867;QD=7.99;ReadPosRankSum=3.392;VQSLOD=-0.1463;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:76.15:0,76,807	0/1:6,0:6:1.38:1,0,9	0/0:69,0:15:31.81:0,32,424	0/0:56,0:12:10.09:0,10,168	0/0:16,0:16:41.64:0,42,616	0/0:23,0:23:64.48:0,64,930	0/0:20,0:20:23.30:0,23,555	1/1:25,1:22:5.09:254,5,0	0/0:18,0:17:41.43:0,41,648	0/1:14,0:14:94.22:94,0,98	1/1:8,1:9:5.41:87,5,0	0/0:8,0:8:10.73:0,11,214	0/0:9,0:8:17.95:0,18,227	0/0:12,0:11:20.96:0,21,258	0/1:19,1:19:39.60:40,0,82	0/0:16,0:15:3.40:0,3,101	0/1:41,0:41:99:285,0,201	0/0:21,0:20:41.98:0,42,591	1/1:12,0:11:10.33:154,10,0	1/1:15,0:13:13.49:88,13,0	1/1:9,1:10:6.86:72,7,0	0/0:13,0:12:35.17:0,35,413	0/0:15,0:15:43.27:0,43,607	0/0:15,0:15:38.05:0,38,583	0/0:19,0:16:31.90:0,32,381	1/1:16,0:16:32.24:264,32,0	1/1:20,3:23:4.13:371,4,0	./.
chr10	85563057	.	TTTTC	T	2273.26	PASS	AB=0.972;AC=22;AF=0.407;AN=54;BaseQRankSum=4.227;DP=543;FS=27.858;HRun=0;HaplotypeScore=72.2587;InbreedingCoeff=0.5089;MQ=56.32;MQ0=24;MQRankSum=-0.125;QD=10.62;ReadPosRankSum=2.925;VQSLOD=0.8102;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:62.67:0,63,593	1/1:6,0:6:5.08:37,5,0	0/0:68,0:15:30.39:0,30,357	0/0:56,0:12:9.92:0,10,127	0/0:16,0:16:39.32:0,39,476	0/0:23,0:23:61.31:0,61,725	0/0:19,0:19:17.35:0,17,414	1/1:23,2:21:39.86:389,40,0	0/0:17,0:16:35.99:0,36,482	0/1:13,0:13:43.05:138,0,43	1/1:8,0:8:8.77:103,9,0	0/1:8,0:8:11.23:11,0,120	0/1:9,0:8:2.06:2,0,130	0/0:12,0:11:5.50:0,6,189	0/1:17,1:17:10.79:55,0,11	0/1:16,0:15:25.37:25,0,43	0/1:34,5:39:11.75:529,0,12	0/0:20,0:19:41:0,41,482	1/1:12,0:11:21.40:175,21,0	1/1:15,0:13:18.82:150,19,0	1/1:8,0:8:8.66:75,9,0	0/0:12,0:11:31.54:0,32,333	0/0:16,0:15:34.40:0,34,471	0/0:15,0:15:33.28:0,33,450	0/0:19,0:16:8.43:0,8,275	1/1:14,1:15:41.22:336,41,0	1/1:8,14:22:19.61:441,20,0	./.
chr10	85563058	.	TTTC	T	2516.07	PASS	AB=1.000;AC=25;AF=0.463;AN=54;BaseQRankSum=3.862;DP=523;FS=14.867;HRun=0;HaplotypeScore=61.4386;InbreedingCoeff=0.7475;MQ=55.26;MQ0=24;MQRankSum=-0.221;QD=12.21;ReadPosRankSum=2.965;VQSLOD=1.3363;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:40.26:0,40,485	1/1:1,5:6:8.07:70,8,0	0/0:64,0:13:31.39:0,31,304	0/0:55,0:11:6.58:0,7,73	0/0:16,0:16:30.84:0,31,360	0/0:22,0:22:54.80:0,55,534	0/0:19,0:19:16.59:0,17,313	1/1:6,17:19:50.45:399,50,0	0/0:16,0:15:31.78:0,32,347	0/1:13,0:13:13.47:145,0,13	1/1:8,1:9:13.15:125,13,0	0/1:5,0:5:0.43:0,0,82	0/1:8,0:7:14.06:14,0,80	0/0:11,0:10:13.10:0,13,179	1/1:5,11:15:8.33:83,8,0	1/1:4,12:15:5.36:77,5,0	1/1:36,1:37:47.90:673,48,0	0/0:19,0:18:37.24:0,37,383	1/1:12,0:11:23.92:205,24,0	1/1:15,0:13:18.69:138,19,0	1/1:9,0:9:9.82:78,10,0	0/0:12,0:11:30.85:0,31,287	0/0:15,0:14:25.99:0,26,357	0/0:15,0:15:37.91:0,38,342	0/0:18,0:15:15.85:0,16,231	1/1:15,0:15:41.87:339,42,0	1/1:21,1:22:35.34:375,35,0	./.
chr10	85563059	.	TTC	T	2359.40	PASS	AB=1.000;AC=25;AF=0.463;AN=54;BaseQRankSum=4.258;DP=514;FS=0.000;HRun=0;HaplotypeScore=55.2674;InbreedingCoeff=0.8806;MQ=55.64;MQ0=20;MQRankSum=-0.404;QD=12.10;ReadPosRankSum=0.136;VQSLOD=3.1421;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:57.44:0,57,489	1/1:5,1:6:8.60:78,9,0	0/0:62,0:13:25.63:0,26,224	0/0:54,0:11:5.07:0,5,42	0/0:15,0:15:28.52:0,29,270	0/0:22,0:22:28.37:0,28,386	0/0:20,0:20:16.32:0,16,259	1/1:23,0:19:49.70:371,50,0	0/0:15,0:14:19.30:0,19,245	1/1:2,11:13:14.62:158,15,0	1/1:9,0:9:14.49:120,14,0	0/0:6,0:6:9.68:0,10,102	0/1:8,0:7:1.81:2,0,68	0/0:11,0:10:23.92:0,24,202	1/1:14,0:14:8.84:84,9,0	1/1:13,0:12:6:53,6,0	1/1:34,1:35:84.16:657,84,0	0/0:19,0:18:36.12:0,36,303	1/1:13,0:12:26.14:197,26,0	1/1:15,0:13:18.08:131,18,0	1/1:9,0:9:11.48:79,11,0	0/0:12,0:11:32.12:0,32,264	0/0:15,0:14:18.16:0,18,245	0/0:15,0:15:26.54:0,27,230	0/0:18,0:15:21.13:0,21,189	1/1:16,0:16:44.87:363,45,0	1/1:21,0:21:34.99:280,35,0	./.
chr10	85563060	.	TC	T	2030.93	PASS	AB=0.981;AC=25;AF=0.463;AN=54;BaseQRankSum=3.635;DP=495;FS=5.718;HRun=5;HaplotypeScore=49.7296;InbreedingCoeff=0.9094;MQ=56.39;MQ0=14;MQRankSum=-1.082;QD=8.61;ReadPosRankSum=1.377;VQSLOD=-0.1246;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:62.72:0,63,499	1/1:6,0:6:8.89:59,9,0	0/0:56,3:13:27.38:0,27,185	0/1:51,1:11:0.15:0,0,18	0/0:13,0:13:31.90:0,32,234	0/0:21,0:21:43.18:0,43,356	0/0:23,0:23:26.10:0,26,320	1/1:23,0:19:45.10:336,45,0	0/0:13,0:13:25.21:0,25,212	1/1:13,0:13:12.97:153,13,0	1/1:9,0:9:14.90:115,15,0	0/0:6,0:6:14.96:0,15,122	0/0:7,0:7:14.61:0,15,105	0/0:10,0:10:28.11:0,28,215	1/1:14,0:14:8.86:57,9,0	1/1:12,0:12:5.92:39,6,0	1/1:32,3:35:77.23:554,77,0	0/0:20,0:19:24.84:0,25,210	1/1:6,7:12:23.82:176,24,0	1/1:14,0:13:15.85:124,16,0	1/1:8,0:8:11.85:81,12,0	0/0:11,0:11:26.95:0,27,227	0/0:11,0:10:26.88:0,27,215	0/0:14,0:14:24.96:0,25,177	0/0:16,0:14:17.99:0,18,155	1/1:3,13:16:44.82:351,45,0	1/1:21,0:21:32.28:201,32,0	./.
chr10	85563577	.	A	AG	3606.13	PASS	AB=0.920;AC=9;AF=0.161;AN=56;BaseQRankSum=-11.843;DP=803;FS=12.045;HRun=5;HaplotypeScore=77.1113;InbreedingCoeff=0.8755;MQ=72.29;MQ0=0;MQRankSum=-0.662;QD=27.95;ReadPosRankSum=1.893;VQSLOD=3.1147;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,1377	1/1:1,10:11:30.10:395,30,0	0/0:30,0:26:41.45:0,41,563	0/0:27,0:26:20.37:0,20,517	0/0:35,0:35:99:0,102,1095	0/0:17,0:17:45.11:0,45,483	0/0:24,0:24:63.14:0,63,668	0/0:32,0:32:81.18:0,81,859	0/0:29,0:29:84.20:0,84,894	1/1:0,22:22:60.16:756,60,0	1/1:3,21:24:51.17:671,51,0	0/0:30,0:30:90.21:0,90,958	0/0:35,0:35:99:0,99,1043	0/0:22,0:22:66.17:0,66,709	0/0:50,0:50:99:0,144,1540	0/0:37,0:37:99:0,102,1096	1/1:4,45:49:99:1776,135,0	0/0:22,0:22:66.13:0,66,696	0/0:20,0:19:48.08:0,48,498	0/0:28,0:28:72.18:0,72,774	0/0:50,0:50:99:0,129,1368	0/0:33,0:33:87.22:0,87,934	0/0:22,0:22:60.15:0,60,645	0/0:28,0:28:78.18:0,78,830	0/0:23,0:23:69.16:0,69,733	0/1:21,2:23:9.27:9,0,608	0/0:29,0:29:78.19:0,78,838	0/0:6,0:6:15.04:0,15,161
chr10	85564141	.	T	TA	1379.21	PASS	AB=0.873;AC=35;AF=0.625;AN=56;BaseQRankSum=7.447;DP=427;FS=0.000;HRun=14;HaplotypeScore=79.9917;InbreedingCoeff=0.5062;MQ=69.92;MQ0=3;MQRankSum=-7.701;QD=4.38;ReadPosRankSum=-0.790;VQSLOD=1.3521;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:0.58:56,1,0	1/1:3,0:3:2.84:14,3,0	0/1:30,0:19:27.58:28,0,89	0/1:13,0:11:1.15:1,0,52	0/0:18,0:18:12.59:0,13,142	0/0:13,0:14:10.91:0,11,125	0/0:17,1:18:22.86:0,23,260	1/1:36,6:36:56.06:320,56,0	0/0:11,0:11:19.14:0,19,113	1/1:18,0:18:18.92:99,19,0	1/1:17,0:16:16.77:96,17,0	1/1:4,4:8:8.91:66,9,0	1/1:2,8:11:14.84:120,15,0	0/1:5,11:16:6.98:133,0,7	1/1:16,0:16:8.05:37,8,0	1/1:19,0:19:25.52:126,26,0	0/1:17,0:18:11.50:75,0,12	0/1:11,2:13:20.12:20,0,122	1/1:9,0:10:17.29:96,17,0	1/1:12,0:12:2.84:14,3,0	1/1:8,0:8:8.36:39,8,0	0/0:17,0:17:16.66:0,17,142	0/0:8,0:8:5.85:0,6,38	0/0:15,1:16:9.11:0,9,185	0/0:10,0:10:17.70:0,18,115	1/1:17,0:17:17.32:103,17,0	1/1:19,0:18:17.04:86,17,0	1/1:1,8:9:5.84:40,6,0
chr10	85564151	.	A	AAAAAAGAAAAG	13157.60	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-4.970;DP=459;FS=6.639;HRun=0;HaplotypeScore=124.0369;InbreedingCoeff=0.8348;MQ=64.64;MQ0=3;MQRankSum=-8.606;QD=46.99;ReadPosRankSum=-1.401;VQSLOD=3.9424;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:20:8.32:763,8,0	1/1:0,2:4:3.01:160,3,0	0/0:31,0:19:31.55:0,32,853	0/0:11,0:9:16.02:0,16,339	0/0:16,0:16:32:0,32,740	0/0:16,0:16:42.12:0,42,1003	0/0:20,0:20:59.07:0,59,1412	1/1:36,0:30:66.20:2447,66,0	0/0:10,0:10:22.31:0,22,317	1/1:6,7:21:42.85:994,43,0	1/1:4,10:19:29.33:949,29,0	0/0:7,0:7:7.01:0,7,156	0/0:12,0:12:24.07:0,24,418	0/1:16,0:16:25.99:26,0,377	1/1:3,4:20:9.03:412,9,0	1/1:3,10:24:27.09:1383,27,0	1/1:5,7:23:24.07:994,24,0	0/0:13,0:13:33.48:0,33,805	1/1:2,6:15:39.12:1510,39,0	1/1:3,4:13:5.95:177,6,0	1/1:1,5:13:12.04:636,12,0	0/0:15,0:15:29.23:0,29,897	0/0:4,0:4:5.98:0,6,187	0/0:16,0:16:39.05:0,39,1065	0/0:8,0:8:21.07:0,21,608	1/1:1,8:19:44.71:1343,45,0	1/1:4,8:20:21.03:948,21,0	1/1:12,0:12:12.51:416,13,0
chr10	85566356	.	CT	C	8300.85	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.367;DP=620;FS=5.193;HRun=1;HaplotypeScore=62.0171;InbreedingCoeff=0.9987;MQ=83.78;MQ0=0;MQRankSum=-5.770;QD=39.91;ReadPosRankSum=-0.435;VQSLOD=5.1837;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,2202	0/0:9,0:9:27.09:0,27,420	0/0:19,0:19:54.18:0,54,860	0/0:28,1:29:21.69:0,22,1055	0/0:17,0:17:51.17:0,51,815	0/0:12,0:12:36.12:0,36,575	0/0:29,0:29:79.74:0,80,1269	1/1:0,29:29:84.24:1123,84,0	0/0:23,0:23:69.22:0,69,1076	0/0:16,0:16:48.15:0,48,727	0/0:13,0:13:36.11:0,36,552	0/0:23,0:23:69.24:0,69,1103	0/0:21,0:21:63.18:0,63,964	0/0:26,0:26:78.24:0,78,1217	1/1:0,20:20:60.20:839,60,0	1/1:0,17:17:48.16:671,48,0	0/0:31,0:30:93.26:0,93,1431	0/0:27,0:27:78.25:0,78,1223	1/1:0,17:17:48.16:667,48,0	1/1:0,13:13:36.12:500,36,0	1/1:0,59:59:99:2389,172,0	0/0:19,0:19:57.18:0,57,888	0/0:18,0:18:54.18:0,54,863	0/0:19,0:19:57.19:0,57,911	0/0:15,0:15:45.15:0,45,720	1/1:1,24:25:27.24:940,27,0	1/1:0,20:20:60.20:838,60,0	1/1:0,8:8:24.08:335,24,0
chr10	85567219	.	G	GA	2503.94	PASS	AB=0.846;AC=30;AF=0.536;AN=56;BaseQRankSum=-3.989;DP=506;FS=0.951;HRun=13;HaplotypeScore=67.1921;InbreedingCoeff=0.0517;MQ=53.22;MQ0=12;MQRankSum=0.324;QD=5.89;ReadPosRankSum=-1.662;VQSLOD=1.9528;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:24:3.52:4,0,7	1/1:7,6:14:0.23:124,0,0	0/0:2,0:1:1.55:0,2,4	0/1:5,0:2:0:0,0,0	0/1:17,1:20:14.20:14,0,159	0/1:9,2:13:27.80:28,0,107	0/0:12,0:12:20.76:0,21,144	0/1:15,15:31:42.85:274,0,43	0/0:15,0:15:20.68:0,21,143	1/1:10,8:19:13.74:176,14,0	1/1:9,8:16:3.82:158,4,0	0/1:22,1:24:28.44:28,0,185	0/0:15,0:15:32.44:0,32,222	0/0:20,0:19:8.22:0,8,181	1/1:5,15:23:32.55:265,33,0	1/1:9,12:23:6.47:225,6,0	0/1:14,15:28:11.65:359,0,12	0/0:17,0:15:27.97:0,28,201	1/1:13,2:15:20.04:181,20,0	0/1:16,7:23:11.77:161,0,12	1/1:8,6:14:12.79:100,13,0	0/1:14,1:15:2.90:3,0,132	0/1:16,0:17:1.98:2,0,124	0/1:19,4:25:57.09:57,0,168	0/1:11,1:12:16.07:16,0,48	1/1:7,9:15:9.42:216,9,0	0/1:15,12:27:11.62:163,0,12	0/1:4,6:9:2.58:116,0,3
chr10	85569105	.	GA	G	5532.20	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=9.576;DP=619;FS=3.389;HRun=11;HaplotypeScore=62.7111;InbreedingCoeff=0.9585;MQ=66.78;MQ0=19;MQRankSum=0.485;QD=16.76;ReadPosRankSum=1.670;VQSLOD=5.9688;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,43:49:86.40:841,86,0	1/1:0,10:10:26.96:220,27,0	0/0:33,1:18:44.12:0,44,349	0/1:33,0:11:0.61:1,0,94	0/0:25,0:25:53.95:0,54,548	0/0:19,0:20:56.95:0,57,574	0/0:25,0:25:63.15:0,63,664	1/1:7,31:37:78.03:738,78,0	0/0:27,0:25:69.16:0,69,728	1/1:4,19:23:59.85:485,60,0	1/1:1,12:12:35.95:295,36,0	0/0:17,0:16:42.06:0,42,427	0/0:15,0:14:36.09:0,36,383	0/0:35,0:36:77.35:0,77,994	1/1:3,12:15:20.96:172,21,0	1/1:1,19:20:44.81:369,45,0	1/1:3,27:29:68.90:567,69,0	0/0:17,0:18:47.95:0,48,494	1/1:1,14:15:41.94:344,42,0	1/1:3,15:18:41.93:344,42,0	1/1:2,14:16:32.96:271,33,0	0/0:14,0:14:33.04:0,33,326	0/0:26,0:25:66.15:0,66,695	0/0:18,1:19:26.47:0,26,479	0/0:12,0:12:33.08:0,33,351	1/1:2,18:20:50.92:418,51,0	1/1:0,20:20:41.48:344,41,0	1/1:4,6:6:14.98:123,15,0
chr10	85571563	.	AG	A	1273.78	PASS	AB=0.867;AC=30;AF=0.536;AN=56;BaseQRankSum=0.628;DP=372;FS=10.795;HRun=11;HaplotypeScore=48.3266;InbreedingCoeff=0.4909;MQ=60.90;MQ0=19;MQRankSum=3.134;QD=4.79;ReadPosRankSum=4.639;VQSLOD=0.1413;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,1:35:47.44:163,47,0	0/0:3,0:3:3.62:0,4,58	0/1:35,0:9:0.92:1,0,28	0/0:26,0:9:8.17:0,8,74	0/0:8,0:7:8.94:0,9,80	0/1:16,1:17:0.20:0,0,164	0/0:8,0:14:26.29:0,26,171	1/1:8,6:12:14.95:120,15,0	0/1:4,0:5:13.20:13,0,45	0/0:6,0:5:5.92:0,6,40	1/1:4,0:3:1.55:4,2,0	1/1:2,0:15:24.94:98,25,0	1/1:2,0:13:16.93:53,17,0	1/1:4,0:16:20.69:62,21,0	1/1:5,10:14:9.14:179,9,0	0/0:5,0:7:12.01:0,12,116	0/0:12,0:11:7.39:0,7,68	0/0:12,1:13:5.35:0,5,215	0/1:10,6:15:1.51:126,0,2	0/1:2,4:6:3.12:62,0,3	1/1:8,0:7:5.90:43,6,0	1/1:3,1:2:2.90:16,3,0	0/1:7,1:6:9.84:10,0,66	0/0:7,0:5:6.02:0,6,63	0/0:7,0:7:3.01:0,3,30	1/1:11,8:18:20.84:164,21,0	1/1:9,15:23:10.66:244,11,0	1/1:1,5:6:11.99:98,12,0
chr10	85571660	.	GA	G	478.58	PASS	AB=0.905;AC=4;AF=0.071;AN=56;BaseQRankSum=5.959;DP=498;FS=3.176;HRun=11;HaplotypeScore=56.9358;InbreedingCoeff=0.3993;MQ=71.98;MQ0=3;MQRankSum=-2.300;QD=9.38;ReadPosRankSum=2.636;VQSLOD=2.4773;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:32:68.90:566,69,0	0/0:6,0:6:18.04:0,18,191	0/0:22,0:7:8.85:0,9,66	0/0:31,0:21:13.66:0,14,126	0/0:23,1:24:48.99:0,49,506	0/0:16,1:17:23.46:0,23,442	0/0:19,0:19:26.51:0,27,471	0/0:30,1:31:44.51:0,45,650	0/0:12,0:12:30.06:0,30,312	0/0:15,0:15:36.08:0,36,377	0/0:15,0:15:36.06:0,36,368	0/0:16,0:16:39.05:0,39,397	0/1:8,1:9:15.55:16,0,54	0/0:14,0:14:30.03:0,30,302	0/0:23,1:24:29.49:0,29,519	0/0:12,1:13:8.44:0,8,294	0/0:21,1:22:46:0,46,622	0/0:18,0:18:46.36:0,46,482	0/0:17,0:18:32.94:0,33,327	0/0:22,0:22:60.15:0,60,639	0/0:12,0:11:27.07:0,27,286	0/0:12,1:13:8.43:0,8,288	0/1:9,1:10:3.59:4,0,163	0/0:10,0:10:30.08:0,30,319	0/0:12,1:13:2.42:0,2,231	0/0:20,1:23:31.33:0,31,541	0/0:25,0:25:48.11:0,48,505	0/0:11,0:11:30.08:0,30,320
chr10	85571708	.	C	CCTAAATAAATA	3035.89	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-5.408;DP=543;FS=0.000;HRun=0;HaplotypeScore=166.0874;InbreedingCoeff=0.9712;MQ=86.61;MQ0=0;MQRankSum=-6.558;QD=101.20;ReadPosRankSum=1.771;VQSLOD=3.9221;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:81.28:0,81,2552	0/0:7,0:7:21.06:0,21,651	0/0:19,0:19:54.18:0,54,1563	0/0:24,0:24:57.14:0,57,1995	0/0:26,0:26:69.24:0,69,2379	0/0:14,0:14:42.14:0,42,1388	0/0:26,0:26:75.26:0,75,2400	0/0:27,0:27:75.25:0,75,2343	0/0:16,0:16:45.15:0,45,1426	0/0:23,0:23:63.22:0,63,2101	0/0:18,0:18:54.19:0,54,1894	1/1:0,8:13:30.10:1754,30,0	1/1:0,4:8:9.03:531,9,0	1/1:0,5:9:15.05:886,15,0	0/0:26,0:26:75.26:0,75,2733	0/0:20,0:20:60.19:0,60,2068	0/0:33,0:33:99:0,99,3267	0/0:17,0:17:48.16:0,48,1586	0/0:25,0:25:75.26:0,75,2359	0/0:21,0:21:63.22:0,63,2141	0/0:18,0:18:51.18:0,51,1838	0/0:17,0:17:51.17:0,51,1798	0/0:13,0:13:39.13:0,39,1318	0/0:20,0:20:60.21:0,60,2107	0/0:10,0:10:30.10:0,30,995	0/0:22,0:21:63.22:0,63,2217	0/0:23,0:23:69.24:0,69,2426	0/0:14,0:14:39.13:0,39,1246
chr10	85572586	.	GAAAT	G	5798.60	PASS	AB=0.600;AC=29;AF=0.537;AN=54;BaseQRankSum=9.320;DP=375;FS=22.458;HRun=0;HaplotypeScore=62.3314;InbreedingCoeff=0.8114;MQ=59.50;MQ0=2;MQRankSum=0.683;QD=26.12;ReadPosRankSum=0.612;VQSLOD=2.8499;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:36.12:0,36,869	1/1:0,2:2:6.02:97,6,0	0/0:9,0:6:6.02:0,6,109	0/0:7,0:7:3.01:0,3,73	0/0:24,0:24:51.18:0,51,1229	0/0:19,0:19:39.13:0,39,925	1/1:2,6:8:18.06:291,18,0	1/1:20,14:34:42.04:541,42,0	0/0:11,0:11:21.07:0,21,507	1/1:5,9:13:21.07:339,21,0	0/1:4,8:12:32.02:270,0,32	1/1:5,11:16:24.08:388,24,0	1/1:7,9:15:21.07:339,21,0	1/1:1,9:10:24.08:388,24,0	0/0:16,0:16:36.10:0,36,744	0/0:7,0:7:9.01:0,9,169	1/1:4,12:16:33.11:533,33,0	0/0:14,0:14:24.08:0,24,557	1/1:11,10:21:30.06:431,30,0	1/1:7,10:17:27.09:436,27,0	1/1:1,3:4:9.03:145,9,0	./.	0/0:5,0:4:6.02:0,6,119	0/0:4,0:4:6.02:0,6,145	0/0:15,0:15:30.06:0,30,622	1/1:5,12:17:36.12:582,36,0	1/1:10,20:30:54.18:872,54,0	1/1:2,3:5:9.03:145,9,0
chr10	85573341	.	GGGA	G	444.59	PASS	AB=0.983;AC=13;AF=0.232;AN=56;BaseQRankSum=0.578;DP=425;FS=7.938;HRun=0;HaplotypeScore=63.7036;InbreedingCoeff=0.4262;MQ=56.95;MQ0=30;MQRankSum=-1.295;QD=4.01;ReadPosRankSum=2.859;VQSLOD=0.3388;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:16:29.74:0,30,221	1/1:2,1:3:8.79:52,9,0	0/0:80,0:18:14.54:0,15,286	0/0:61,0:16:21:0,21,485	0/0:12,0:11:20.10:0,20,275	0/0:8,0:8:20.28:0,20,138	1/1:14,1:14:11.79:84,12,0	0/1:10,1:10:4.30:4,0,145	0/0:6,0:5:11.95:0,12,104	1/1:2,7:9:18.05:132,18,0	0/0:1,5:5:3.01:0,3,35	0/0:10,0:10:15.41:0,15,124	0/0:8,0:6:15.01:0,15,161	0/0:8,0:7:11.39:0,11,98	0/0:11,0:11:26.83:0,27,224	0/0:14,0:14:31.65:0,32,358	1/1:7,3:18:28.63:248,29,0	0/1:16,0:15:11.94:12,0,129	0/1:7,0:6:18.03:18,0,51	0/0:7,1:7:9.04:0,9,80	0/0:16,0:15:33.30:0,33,290	0/0:5,0:5:6.02:0,6,81	0/0:5,0:5:11.65:0,12,121	0/0:19,0:16:23.49:0,23,299	0/0:5,0:5:13.91:0,14,121	0/1:12,0:12:33.87:34,0,125	0/1:13,0:11:28.03:28,0,73	0/0:12,0:12:16.11:0,16,224
chr10	85573342	.	GGA	G	310.39	PASS	AB=0.967;AC=13;AF=0.232;AN=56;BaseQRankSum=0.109;DP=423;FS=15.530;HRun=0;HaplotypeScore=59.9750;InbreedingCoeff=0.3485;MQ=57.13;MQ0=29;MQRankSum=-0.562;QD=3.17;ReadPosRankSum=3.549;VQSLOD=0.3513;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:16:29.74:0,30,220	1/1:4,0:3:8.79:52,9,0	0/0:79,0:18:14.52:0,15,266	0/0:60,0:16:34.72:0,35,396	0/0:12,0:11:6.02:0,6,183	0/0:8,0:8:18.25:0,18,106	1/1:7,9:14:12.19:82,12,0	0/0:12,0:11:5.61:0,6,158	0/0:5,1:5:11.84:0,12,77	1/1:10,1:9:20.32:116,20,0	0/0:6,0:5:3.01:0,3,32	0/1:8,2:10:1.65:2,0,59	0/0:8,0:6:14.98:0,15,124	0/0:8,0:7:8.67:0,9,35	0/0:10,0:10:16.19:0,16,156	0/0:15,0:14:0.93:0,1,212	1/1:19,0:18:28.45:167,28,0	0/0:15,2:15:2.09:0,2,99	0/1:7,0:6:9.45:9,0,51	0/0:8,0:7:0.08:0,0,70	0/0:16,0:15:23.98:0,24,255	0/0:4,1:5:5.50:0,6,41	0/0:5,0:5:11.64:0,12,89	0/0:17,0:15:11.96:0,12,161	0/1:5,0:5:6.17:6,0,86	0/1:12,0:12:24.45:24,0,116	0/1:13,0:11:8.48:8,0,71	0/0:12,0:12:28.96:0,29,222
chr10	85573793	.	CA	C	11630.63	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=8.403;DP=561;FS=3.441;HRun=4;HaplotypeScore=62.2337;InbreedingCoeff=0.9982;MQ=81.73;MQ0=0;MQRankSum=-1.976;QD=32.49;ReadPosRankSum=1.553;VQSLOD=5.5587;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:78.24:936,78,0	1/1:0,7:7:21.06:252,21,0	0/0:18,0:18:48.02:0,48,555	0/0:13,0:13:35.85:0,36,415	0/0:24,0:24:69.22:0,69,949	0/0:19,0:19:54.14:0,54,734	0/0:24,0:24:66.19:0,66,887	1/1:2,31:33:93.29:1115,93,0	0/0:18,0:18:51.16:0,51,695	1/1:0,20:20:57.15:661,57,0	1/1:0,15:15:39.12:468,39,0	1/1:0,20:20:60.18:720,60,0	1/1:0,16:16:48.15:576,48,0	1/1:2,15:17:42.13:499,42,0	1/1:2,24:26:63.19:756,63,0	1/1:1,25:26:75.23:900,75,0	1/1:0,22:22:60.18:720,60,0	0/0:20,0:20:51.14:0,51,691	1/1:5,15:20:51.14:601,51,0	1/1:0,19:19:54.17:648,54,0	1/1:0,27:27:72.22:864,72,0	0/0:18,0:18:48.16:0,48,672	0/0:17,0:17:48.15:0,48,654	0/0:17,0:17:51.15:0,51,692	0/0:15,0:15:45.13:0,45,598	1/1:1,19:20:57.14:659,57,0	1/1:2,32:34:87.26:1042,87,0	1/1:0,7:7:18.06:216,18,0
chr10	85579605	.	TAAAACGAGGGCCATTACTG	T	1600.27	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.311;DP=762;FS=0.000;HRun=0;HaplotypeScore=365.5970;InbreedingCoeff=0.9691;MQ=91.88;MQ0=0;MQRankSum=-6.384;QD=50.01;ReadPosRankSum=0.231;VQSLOD=1.8737;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,21:32:42.14:1695,42,0	0/0:10,0:10:30.10:0,30,2540	0/0:41,0:41:99:0,111,5882	0/0:23,0:23:63.19:0,63,3475	0/0:25,0:25:69.19:0,69,5808	0/0:29,0:29:87.30:0,87,7155	0/0:33,0:33:96.28:0,96,7570	0/0:34,0:34:93.18:0,93,7297	0/0:28,0:28:75.24:0,75,5877	0/0:34,0:34:93.32:0,93,8045	0/0:11,0:11:30.10:0,30,2496	0/0:36,0:36:99:0,99,8007	0/0:31,0:31:81.28:0,81,7173	0/0:16,0:16:42.14:0,42,3062	0/0:33,0:33:90.30:0,90,7084	0/0:35,0:35:96.33:0,96,7587	0/0:39,0:39:99:0,102,8154	0/0:22,0:22:54.19:0,54,4621	0/0:14,0:14:33.07:0,33,2137	0/0:29,0:29:78.27:0,78,6131	0/0:35,0:35:99:0,99,8200	0/0:28,0:28:81.28:0,81,6738	0/0:21,0:21:60.21:0,60,5032	0/0:27,0:27:66.23:0,66,4675	0/0:21,0:21:60.21:0,60,4786	0/0:44,0:44:99:0,129,11220	0/0:27,0:27:72.18:0,72,5982	0/0:4,0:4:12.04:0,12,1070
chr10	85580190	.	A	AC	13960.56	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-10.738;DP=782;FS=6.580;HRun=3;HaplotypeScore=90.7374;InbreedingCoeff=0.9994;MQ=86.90;MQ0=0;MQRankSum=-4.926;QD=34.30;ReadPosRankSum=0.501;VQSLOD=5.0450;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,49:49:99:1678,120,0	1/1:0,12:12:30.10:420,30,0	0/0:29,0:29:60.22:0,60,810	0/0:30,0:30:75.23:0,75,896	0/0:19,0:19:54.17:0,54,646	0/0:26,0:26:78.24:0,78,934	0/0:34,0:34:96.29:0,96,1151	1/1:2,39:41:99:1595,117,0	0/0:24,0:24:69.21:0,69,826	1/1:3,21:24:60.19:822,60,0	1/1:1,16:17:42.14:588,42,0	0/0:43,0:43:99:0,120,1403	0/0:46,0:46:99:0,132,1567	0/0:35,0:35:99:0,102,1210	1/1:4,41:45:99:1428,102,0	1/1:2,26:28:69.23:966,69,0	1/1:3,36:39:93.15:1301,93,0	0/0:24,0:24:66.20:0,66,792	1/1:3,11:14:36.08:453,36,0	1/1:3,9:12:27.09:371,27,0	1/1:1,69:70:99:2347,169,0	0/0:15,0:15:39.12:0,39,464	0/0:15,0:15:36.11:0,36,432	0/0:23,0:23:63.19:0,63,755	0/0:12,0:12:36.11:0,36,425	1/1:3,30:32:87.29:1215,87,0	1/1:0,14:14:35.79:504,36,0	1/1:2,6:8:23.15:271,23,0
chr10	85580578	.	A	AC	1796.83	PASS	AB=0.692;AC=16;AF=0.286;AN=56;BaseQRankSum=-6.580;DP=497;FS=3.033;HRun=9;HaplotypeScore=56.8890;InbreedingCoeff=0.4958;MQ=78.92;MQ0=0;MQRankSum=1.888;QD=9.93;ReadPosRankSum=-2.002;VQSLOD=1.7647;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:83.85:0,84,713	0/0:6,0:6:14.99:0,15,130	0/1:14,0:15:1.50:1,0,141	0/0:17,0:17:18.45:0,18,180	0/0:7,0:7:14.96:0,15,128	0/0:16,0:16:44.92:0,45,376	0/0:30,0:32:73.01:0,73,606	1/1:15,21:36:28.07:472,28,0	0/0:12,0:13:35.01:0,35,286	0/0:20,0:20:41.97:0,42,364	0/0:12,0:12:26.67:0,27,213	1/1:4,18:22:32.83:365,33,0	1/1:6,9:15:15.04:166,15,0	0/1:7,10:17:11.02:114,0,11	0/0:21,0:22:46.99:0,47,390	0/0:20,0:20:53.94:0,54,458	0/0:31,0:33:88:0,88,730	0/0:26,0:26:68.94:0,69,593	1/1:4,10:14:27:272,27,0	1/1:1,1:2:3.01:33,3,0	0/1:15,13:28:11.01:118,0,11	0/0:13,0:13:26.97:0,27,230	0/0:4,0:4:12:0,12,104	0/0:29,0:31:66.62:0,67,592	0/0:5,0:5:15:0,15,130	0/1:4,6:10:5:177,0,5	0/1:8,9:17:46.34:201,0,46	0/1:2,3:5:17.03:57,0,17
chr10	85584037	.	G	GC	20201.18	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-16.496;DP=798;FS=12.443;HRun=2;HaplotypeScore=77.5722;InbreedingCoeff=0.9983;MQ=84.91;MQ0=0;MQRankSum=-4.217;QD=37.55;ReadPosRankSum=3.007;VQSLOD=4.6243;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,56:57:99:2158,151,0	1/1:0,6:6:18.06:259,18,0	0/0:26,0:26:66.16:0,66,776	0/0:27,0:27:78.21:0,78,929	0/0:27,0:27:81.25:0,81,994	0/0:25,0:25:69.22:0,69,855	0/0:24,0:24:69.22:0,69,856	1/1:2,31:33:87.27:1215,87,0	0/0:29,0:29:81.24:0,81,991	1/1:1,22:23:60.20:864,60,0	1/1:1,23:24:60.20:864,60,0	1/1:3,43:46:99:1641,114,0	1/1:0,27:27:69.23:994,69,0	1/1:0,28:28:84.28:1206,84,0	1/1:2,44:46:99:1728,120,0	1/1:2,48:50:99:1944,135,0	1/1:1,36:38:99:1536,108,0	0/0:17,0:17:48.11:0,48,578	1/1:2,18:20:54.17:760,54,0	1/1:2,20:22:51.12:690,51,0	1/1:3,36:39:96.32:1383,96,0	0/0:18,0:18:51.16:0,51,632	0/0:17,0:17:42.13:0,42,520	0/0:30,0:30:89.28:0,89,1057	0/0:20,0:20:57.17:0,57,695	1/1:1,27:28:78.21:1066,78,0	1/1:0,40:39:99:1598,111,0	1/1:1,10:11:21.07:295,21,0
chr10	85585740	.	TA	T	944.77	PASS	AB=0.906;AC=10;AF=0.179;AN=56;BaseQRankSum=6.632;DP=560;FS=4.659;HRun=13;HaplotypeScore=66.1305;InbreedingCoeff=0.7498;MQ=76.20;MQ0=2;MQRankSum=0.118;QD=8.91;ReadPosRankSum=0.646;VQSLOD=2.8607;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:36.52:0,37,345	1/1:3,6:9:14.91:109,15,0	0/1:20,1:15:6.16:6,0,95	0/0:21,0:17:23.70:0,24,167	0/0:25,1:28:33.99:0,34,442	0/0:28,1:29:53.11:0,53,656	0/0:10,0:10:18.03:0,18,174	0/0:34,1:37:58.88:0,59,699	0/0:13,0:13:29.64:0,30,256	1/1:3,22:25:39.43:452,39,0	1/1:6,15:21:34.75:246,35,0	0/0:22,0:22:54.06:0,54,515	0/0:25,0:25:54.01:0,54,502	0/0:14,0:14:33.04:0,33,313	0/0:30,0:30:72.11:0,72,696	0/0:28,0:27:69.03:0,69,653	1/1:4,14:18:38.77:284,39,0	0/0:14,1:15:5.15:0,5,212	0/0:20,0:24:62.29:0,62,533	0/0:30,1:31:48.08:0,48,618	0/0:17,0:17:42.06:0,42,403	0/0:8,0:8:18.03:0,18,175	0/0:17,2:19:23.63:0,24,384	0/1:10,2:12:10.77:11,0,230	0/0:12,0:12:27.04:0,27,262	0/0:18,0:18:31.16:0,31,339	0/0:28,1:29:56.20:0,56,700	0/0:9,0:9:18.01:0,18,168
chr10	85585911	.	GTT	G	4331.37	PASS	AB=0.659;AC=29;AF=0.518;AN=56;BaseQRankSum=2.044;DP=612;FS=13.222;HRun=14;HaplotypeScore=97.9643;InbreedingCoeff=0.7454;MQ=70.73;MQ0=6;MQRankSum=0.547;QD=12.10;ReadPosRankSum=3.283;VQSLOD=2.3638;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:19:28.10:75,28,0	0/0:1,0:6:12.48:0,12,43	0/0:37,0:15:25.73:0,26,224	0/0:22,0:10:8.78:0,9,65	0/0:18,0:18:45.10:0,45,602	0/0:21,0:25:50.44:0,50,588	1/1:3,6:9:14.98:139,15,0	0/1:18,17:36:45.79:370,0,46	0/0:17,0:20:48.09:0,48,598	0/1:11,3:23:17.56:18,0,177	0/0:11,0:23:6.04:0,6,75	1/1:1,0:20:41.16:177,41,0	1/1:4,0:26:49.14:226,49,0	1/1:3,0:24:49.36:212,49,0	1/1:6,18:24:29.41:321,29,0	1/1:5,22:27:52.41:553,52,0	0/0:13,0:31:64.71:0,65,318	0/1:8,1:17:27.06:27,0,50	1/1:4,7:14:7.01:174,7,0	1/1:6,24:31:58.43:552,58,0	1/1:7,12:19:30:277,30,0	0/0:17,0:18:45.12:0,45,583	0/0:13,0:15:44.61:0,45,540	0/0:25,0:25:66.17:0,66,836	0/0:10,0:13:32.55:0,33,380	1/1:6,20:28:53.48:516,53,0	1/1:4,18:23:48.07:426,48,0	1/1:4,12:17:23.81:268,24,0
chr10	85587165	.	AAC	A	548.97	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=4.169;DP=387;FS=18.799;HRun=0;HaplotypeScore=48.6830;InbreedingCoeff=0.6612;MQ=82.98;MQ0=2;MQRankSum=-2.796;QD=36.60;ReadPosRankSum=2.569;VQSLOD=4.0057;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:42.14:643,42,0	0/0:5,0:5:12.04:0,12,214	0/0:12,0:12:33.06:0,33,572	0/0:13,0:13:33.11:0,33,607	0/0:5,0:5:15.05:0,15,290	0/0:9,0:9:21.07:0,21,405	0/0:34,0:34:96.31:0,96,1804	0/0:8,0:8:21.07:0,21,406	0/0:10,0:10:30.10:0,30,572	0/0:5,0:5:15.05:0,15,290	0/0:1,0:1:3.01:0,3,58	0/0:22,0:22:66.23:0,66,1263	0/0:21,0:21:60.17:0,60,1077	0/0:19,0:19:54.17:0,54,998	0/0:8,0:8:24.08:0,24,464	0/0:17,0:17:51.17:0,51,924	0/0:40,0:39:99:0,117,2219	0/0:16,0:16:48.14:0,48,892	0/0:15,0:15:42.14:0,42,796	0/0:1,0:1:3.01:0,3,58	0/0:37,0:36:99:0,105,1997	0/0:6,0:6:18.06:0,18,347	0/0:3,0:3:9.03:0,9,174	0/0:34,0:34:99:0,102,1945	0/0:11,0:11:33.11:0,33,637	0/0:13,0:13:36.11:0,36,663	0/0:7,0:7:21.07:0,21,393	./.
chr10	85587925	.	C	CTT	2895.28	PASS	AB=0.970;AC=39;AF=0.696;AN=56;BaseQRankSum=1.908;DP=568;FS=8.624;HRun=13;HaplotypeScore=92.6673;InbreedingCoeff=0.6556;MQ=74.06;MQ0=0;MQRankSum=-1.110;QD=6.94;ReadPosRankSum=-3.630;VQSLOD=-0.2617;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,1:27:26.98:255,27,0	1/1:4,6:10:9.03:122,9,0	0/1:16,0:12:11.32:11,0,29	0/1:17,0:18:6.21:6,0,89	0/0:19,0:21:41.30:0,41,340	0/0:22,0:24:44.39:0,44,418	1/1:5,9:14:14.41:171,14,0	1/1:8,0:26:40.50:233,40,0	0/0:12,0:14:18.55:0,19,147	1/1:7,10:18:31.90:395,32,0	1/1:2,7:12:23.38:188,23,0	1/1:18,0:18:20.22:156,20,0	1/1:26,0:25:27.92:256,28,0	1/1:14,0:12:8.50:61,8,0	1/1:14,2:25:18:180,18,0	1/1:9,1:28:23.69:228,24,0	1/1:6,14:24:14.51:154,15,0	0/1:17,0:20:8.62:9,0,188	1/1:7,0:17:18.55:90,19,0	1/1:8,1:28:4.40:193,4,0	1/1:7,0:25:6.52:77,7,0	0/0:17,0:22:28.41:0,28,249	0/0:19,0:21:24.99:0,25,259	0/0:20,1:21:0.92:0,1,302	0/0:25,0:28:52.92:0,53,422	1/1:5,2:19:24.82:169,25,0	1/1:9,2:27:18.97:124,19,0	1/1:1,0:3:2.50:9,2,0
chr10	85589149	.	C	CAG	1963.09	PASS	AB=0.947;AC=30;AF=0.577;AN=52;BaseQRankSum=4.651;DP=600;FS=18.349;HRun=0;HaplotypeScore=113.1597;InbreedingCoeff=0.5448;MQ=67.85;MQ0=6;MQRankSum=-1.564;QD=4.69;ReadPosRankSum=0.573;VQSLOD=1.4799;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,10:32:6.44:61,6,0	./.	./.	0/1:39,0:24:0:0,0,0	0/1:23,0:23:15.19:15,0,144	0/0:23,0:25:23.74:0,24,196	0/1:17,0:17:0:0,0,0	1/1:33,0:33:24.84:153,25,0	0/0:15,0:17:22.75:0,23,183	1/1:20,0:20:17.91:136,18,0	1/1:16,5:22:3.01:45,3,0	0/1:24,1:25:51.10:70,0,51	0/0:15,0:15:5.58:0,6,33	0/0:24,0:24:11.37:0,11,63	1/1:34,0:34:17.74:340,18,0	1/1:22,0:22:33.01:295,33,0	0/1:11,7:18:4.69:174,0,5	0/0:14,0:16:17.87:0,18,177	1/1:20,0:20:8.97:69,9,0	1/1:14,0:14:11.91:88,12,0	1/1:19,0:17:3:25,3,0	0/0:13,0:13:5.97:0,6,46	0/0:17,0:20:26.09:0,26,197	0/0:21,0:22:29.82:0,30,275	1/1:15,0:15:17.99:166,18,0	1/1:17,10:27:29.93:301,30,0	1/1:27,0:25:25.18:183,25,0	0/1:11,0:11:6.14:20,0,6
chr10	85589186	.	A	AGT	541.33	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=9.046;DP=630;FS=0.000;HRun=0;HaplotypeScore=102.6292;InbreedingCoeff=0.5405;MQ=63.43;MQ0=12;MQRankSum=0.490;QD=5.16;ReadPosRankSum=3.778;VQSLOD=2.0505;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:20.90:0,21,260	0/0:5,0:5:11.92:0,12,94	0/0:20,0:14:29.85:0,30,274	0/0:38,0:17:31.26:0,31,327	0/0:26,0:25:47.07:0,47,608	0/0:32,0:31:80.88:0,81,804	0/0:13,0:13:24.07:0,24,222	0/0:38,0:38:98.97:0,99,807	0/0:21,0:21:52.64:0,53,501	0/0:22,0:22:50.06:0,50,428	0/0:22,0:22:13.35:0,13,230	0/0:23,0:23:39.39:0,39,496	0/0:17,0:17:50.92:0,51,448	0/0:19,0:19:50.95:0,51,477	1/1:30,0:30:9:270,9,0	1/1:10,18:28:8.09:344,8,0	0/1:23,0:23:30.07:30,0,261	0/0:16,0:16:44.92:0,45,463	0/0:25,0:23:54.91:0,55,444	0/0:12,0:12:22.76:0,23,174	0/0:23,0:21:29.98:0,30,256	0/0:10,0:10:15.01:0,15,162	0/0:21,0:21:53.99:0,54,556	0/0:26,0:26:63.01:0,63,690	0/0:15,0:15:12.76:0,13,213	0/1:24,0:23:21.90:22,0,316	0/0:31,0:29:48.14:0,48,385	0/0:19,0:19:47.90:0,48,361
chr10	85589188	.	A	AGT	807.71	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=8.067;DP=625;FS=0.627;HRun=0;HaplotypeScore=106.5094;InbreedingCoeff=0.5626;MQ=63.79;MQ0=12;MQRankSum=1.108;QD=7.69;ReadPosRankSum=1.981;VQSLOD=3.0556;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:18.56:0,19,194	0/0:5,0:5:11.87:0,12,92	0/0:19,0:14:28.70:0,29,299	0/0:37,0:18:34.52:0,35,357	0/0:26,0:25:41.09:0,41,551	0/0:31,0:30:77.87:0,78,775	0/0:15,0:15:28.23:0,28,232	0/0:38,0:38:93.95:0,94,757	0/0:20,0:20:45.34:0,45,437	0/0:22,0:22:47.44:0,47,406	0/0:22,0:22:10.35:0,10,204	0/0:24,0:24:38.92:0,39,499	0/0:18,0:18:47.91:0,48,422	0/0:19,0:19:47.99:0,48,456	1/1:21,9:30:15.55:467,16,0	1/1:22,5:27:28.81:423,29,0	0/1:22,0:22:28.06:28,0,281	0/0:15,0:15:38.89:0,39,416	0/0:25,0:23:61.74:0,62,498	0/0:12,0:12:23.12:0,23,176	0/0:23,0:21:29.49:0,29,253	0/0:8,0:8:11.99:0,12,133	0/0:22,0:22:56.96:0,57,577	0/0:24,0:24:60:0,60,654	0/0:15,0:15:5.01:0,5,200	0/1:26,0:25:24:24,0,322	0/0:30,0:28:43.41:0,43,356	0/0:19,0:19:43.52:0,44,330
chr10	85589190	.	A	AGT	1133.46	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=6.811;DP=608;FS=1.182;HRun=0;HaplotypeScore=111.5567;InbreedingCoeff=0.5769;MQ=65.03;MQ0=11;MQRankSum=-1.884;QD=7.66;ReadPosRankSum=0.451;VQSLOD=3.5132;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:41.19:318,41,0	0/0:5,0:5:8.99:0,9,73	0/0:19,0:14:35.55:0,36,342	0/0:37,0:19:33.08:0,33,362	0/0:24,0:23:32.10:0,32,431	0/0:30,0:29:53.64:0,54,489	0/0:15,0:15:35.58:0,36,289	0/0:38,0:38:68.94:0,69,607	0/0:18,0:18:24.94:0,25,350	0/0:22,0:22:35.98:0,36,310	0/0:21,0:21:11.11:0,11,199	0/0:22,0:22:38.50:0,39,489	0/0:16,0:17:47.69:0,48,385	0/0:18,0:18:41.96:0,42,397	1/1:2,24:29:33.31:507,33,0	1/1:22,4:26:27.09:404,27,0	0/1:23,0:23:27.13:27,0,256	0/0:13,0:13:36.01:0,36,361	0/0:28,0:26:37.25:0,37,486	0/0:12,0:12:25.14:0,25,192	0/0:22,0:21:29.49:0,29,252	0/0:8,0:8:9.01:0,9,90	0/0:22,0:22:53.98:0,54,513	0/0:24,0:24:54.02:0,54,554	0/0:14,0:14:11.07:0,11,182	0/1:22,0:21:24.70:25,0,286	0/0:31,0:29:40.51:0,41,345	0/1:18,0:18:9.38:9,0,164
chr10	85589543	.	TTAATAATAA	T	888.22	PASS	AB=1.000;AC=20;AF=0.556;AN=36;BaseQRankSum=4.717;DP=193;FS=0.000;HRun=0;HaplotypeScore=55.1877;InbreedingCoeff=0.5275;MQ=76.95;MQ0=3;MQRankSum=-2.895;QD=10.70;ReadPosRankSum=0.666;VQSLOD=1.3186;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:15:0:0,0,0	./.	./.	0/1:8,0:7:0:0,0,0	./.	0/0:8,0:8:18.06:0,18,821	1/1:1,0:3:1.25:3,1,0	0/0:26,0:22:21.06:0,21,577	./.	1/1:2,3:5:9.02:191,9,0	1/1:4,2:6:5.98:103,6,0	./.	1/1:2,0:5:3.01:63,3,0	1/1:1,0:3:3.01:63,3,0	1/1:2,0:3:1.25:3,1,0	1/1:5,0:8:1.25:3,1,0	1/1:13,10:23:18.06:498,18,0	0/0:7,0:10:4.49:0,4,36	./.	0/0:3,0:3:3.01:0,3,62	./.	./.	./.	./.	0/0:7,0:7:9.03:0,9,281	1/1:1,1:2:3.01:83,3,0	0/0:2,0:2:3.01:0,3,129	0/0:10,0:9:6.02:0,6,229
chr10	85590820	.	G	GA	490.08	PASS	AB=0.646;AC=6;AF=0.188;AN=32;BaseQRankSum=-4.798;DP=130;FS=42.329;HRun=19;HaplotypeScore=10.0747;InbreedingCoeff=0.2742;MQ=53.04;MQ0=48;MQRankSum=-1.869;QD=23.34;ReadPosRankSum=3.620;VQSLOD=5.0438;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:2:6.02:0,6,72	./.	0/0:32,0:5:12.03:0,12,144	0/0:22,0:3:2.74:0,3,14	0/0:5,1:4:4.14:0,4,16	0/1:2,3:5:26:124,0,26	./.	0/0:1,0:1:3.01:0,3,42	1/1:2,7:7:18.06:261,18,0	0/0:4,0:3:9.03:0,9,117	./.	0/0:2,0:1:3.01:0,3,41	./.	./.	0/0:2,0:1:3.01:0,3,32	./.	./.	./.	./.	0/0:2,0:1:3.01:0,3,41	./.	1/1:0,5:5:12.04:172,12,0	0/1:1,1:2:4.90:40,0,5	0/0:2,5:5:0:0,0,0	0/0:5,0:3:5.98:0,6,55	0/0:5,0:1:3.01:0,3,41	./.	./.
chr10	85591225	.	GAAAAAAAAAAAAAGAAA	G	3652.55	PASS	AB=0.747;AC=15;AF=0.278;AN=54;BaseQRankSum=8.100;DP=412;FS=2.521;HRun=0;HaplotypeScore=113.8995;InbreedingCoeff=0.5512;MQ=37.61;MQ0=67;MQRankSum=-4.045;QD=32.61;ReadPosRankSum=5.525;VQSLOD=2.3887;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:21.91:0,22,1175	./.	0/0:23,0:1:3.01:0,3,68	0/0:18,0:1:3.01:0,3,143	0/0:17,0:16:24.08:0,24,1707	0/0:19,0:17:42.10:0,42,2798	0/0:22,0:20:45.15:0,45,2838	1/1:16,6:16:14.96:262,15,0	0/0:10,0:8:9.03:0,9,698	0/0:12,0:12:27.09:0,27,1494	0/0:14,0:11:9.03:0,9,565	0/0:20,0:15:24.55:0,25,1560	0/0:12,0:10:23.82:0,24,1412	0/0:9,0:7:18.06:0,18,1296	1/1:5,7:10:18.53:757,19,0	0/1:10,9:16:99:884,0,209	0/0:26,0:25:53.26:0,53,2836	0/0:13,0:12:24.08:0,24,1473	1/1:9,3:10:5.54:390,6,0	1/1:2,3:4:3.10:259,3,0	0/1:9,0:9:3.52:91,0,4	0/0:6,0:1:3.01:0,3,85	0/0:8,0:7:18.06:0,18,1155	0/0:14,0:8:20.19:0,20,1108	0/0:11,0:8:15.05:0,15,985	0/1:4,3:7:99:350,0,173	1/1:7,5:9:12.51:528,13,0	1/1:8,2:3:3.01:132,3,0
chr10	85593131	.	T	TA	4628.35	PASS	AB=0.804;AC=18;AF=0.321;AN=56;BaseQRankSum=-13.347;DP=627;FS=9.958;HRun=10;HaplotypeScore=63.3652;InbreedingCoeff=0.8542;MQ=70.03;MQ0=0;MQRankSum=0.753;QD=20.39;ReadPosRankSum=-1.616;VQSLOD=4.8334;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:77.09:0,77,617	0/0:9,0:9:20.97:0,21,172	0/0:12,0:11:11.93:0,12,97	0/1:14,0:13:5.72:6,0,71	0/0:31,0:31:86.87:0,87,713	0/0:26,0:26:65.92:0,66,542	0/0:11,0:11:32.93:0,33,266	1/1:11,22:33:62.79:628,63,0	0/0:26,0:26:68.89:0,69,565	0/0:25,0:27:75.97:0,76,602	0/0:21,0:21:53.90:0,54,439	0/0:16,0:16:41.91:0,42,341	0/0:29,0:29:68.82:0,69,560	0/0:21,0:21:25.47:0,25,347	1/1:5,22:27:26.51:487,27,0	1/1:2,14:17:38.75:398,39,0	0/0:32,0:32:83.82:0,84,677	0/0:18,0:18:41.94:0,42,345	0/1:6,11:17:10.22:302,0,10	1/1:4,26:30:71.99:717,72,0	1/1:2,16:18:42.11:448,42,0	0/0:20,0:20:50.88:0,51,415	0/0:25,0:25:65.90:0,66,539	0/0:17,0:17:47.94:0,48,394	0/0:31,0:31:82.64:0,83,662	1/1:8,23:31:69.17:736,69,0	1/1:7,18:25:29.29:500,29,0	1/1:0,14:15:37.97:407,38,0
chr10	85594038	.	CAG	C	1512.29	PASS	AB=0.917;AC=10;AF=0.179;AN=56;BaseQRankSum=0.515;DP=711;FS=7.908;HRun=0;HaplotypeScore=117.2060;InbreedingCoeff=0.2208;MQ=58.72;MQ0=14;MQRankSum=-3.321;QD=8.36;ReadPosRankSum=-1.998;VQSLOD=2.6243;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,2:33:37.02:37,0,194	0/0:9,0:9:6.80:0,7,364	0/0:38,0:22:10.45:0,10,314	0/0:37,0:25:28.74:0,29,467	0/0:33,0:33:48.17:0,48,1052	0/0:28,0:28:47.25:0,47,1059	0/0:27,0:27:56.99:0,57,532	1/1:20,0:16:29.54:354,30,0	0/0:20,0:20:49.01:0,49,694	0/0:34,0:34:78.93:0,79,1089	0/0:13,0:13:17.48:0,17,343	0/0:16,0:16:29.86:0,30,274	0/0:21,0:20:23.97:0,24,208	0/0:29,0:29:39.49:0,39,348	0/0:31,0:30:52.45:0,52,524	0/0:33,1:34:19.12:0,19,528	0/0:26,0:26:42.20:0,42,917	0/0:29,1:29:6.54:0,7,872	1/1:14,0:13:9.25:201,9,0	0/1:24,1:24:99:155,0,145	0/1:38,1:38:99:405,0,154	0/0:34,0:33:42.71:0,43,1095	0/0:19,0:19:26.09:0,26,674	0/0:35,0:35:53.29:0,53,1257	0/0:16,0:16:36.07:0,36,561	0/1:17,2:19:92.50:262,0,92	0/1:18,2:20:99:165,0,168	0/1:8,2:9:84.52:86,0,85
chr10	85594892	.	C	CTGTGTGTG	3136.65	PASS	AB=1.000;AC=24;AF=0.480;AN=50;BaseQRankSum=0.294;DP=661;FS=8.148;HRun=0;HaplotypeScore=190.7077;InbreedingCoeff=0.6430;MQ=52.79;MQ0=23;MQRankSum=-5.738;QD=10.22;ReadPosRankSum=-0.790;VQSLOD=1.9670;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:1.82:6,2,0	0/0:5,0:10:17.83:0,18,185	./.	./.	0/0:41,0:40:62.50:0,62,1090	0/0:19,0:24:27.04:0,27,472	0/0:16,0:25:21.38:0,21,276	1/1:26,0:26:7.84:116,8,0	0/0:12,0:14:23.84:0,24,385	0/0:15,0:18:8.48:0,8,45	0/1:23,0:24:15.50:16,0,273	./.	1/1:12,4:19:6.48:149,6,0	1/1:16,6:22:3.01:122,3,0	1/1:15,0:29:2.18:223,2,0	0/1:26,0:25:9.16:283,0,9	0/0:23,0:32:20.74:0,21,215	0/0:24,0:24:23.94:0,24,557	1/1:18,0:16:30.10:766,30,0	1/1:27,0:27:12.51:299,13,0	1/1:20,0:17:0.47:1,0,0	0/0:8,0:8:5.89:0,6,126	0/0:20,0:19:18.01:0,18,279	0/0:23,0:24:30.10:0,30,612	0/0:18,0:18:27.74:0,28,511	1/1:24,0:23:27.09:683,27,0	1/1:27,0:28:3.65:442,4,0	1/1:13,0:13:12.02:208,12,0
chr10	85594933	.	T	TTG	239.80	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=4.604;DP=536;FS=20.868;HRun=0;HaplotypeScore=95.3483;InbreedingCoeff=0.5077;MQ=52.06;MQ0=14;MQRankSum=-4.289;QD=4.70;ReadPosRankSum=-3.142;VQSLOD=0.4149;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,16:24:27.08:333,27,0	0/0:9,0:9:15.77:0,16,138	0/0:27,0:11:30.01:0,30,357	0/0:25,0:12:33.02:0,33,404	0/0:35,0:35:84.18:0,84,1064	0/0:22,0:21:19.09:0,19,435	0/0:20,0:20:29.84:0,30,281	0/0:27,0:27:64.90:0,65,827	0/0:16,0:16:39.11:0,39,472	0/0:17,0:18:10.99:0,11,410	0/0:19,0:19:30.04:0,30,358	0/0:12,0:12:5.74:0,6,125	0/0:10,0:11:17.15:0,17,146	0/0:12,0:12:23.07:0,23,239	0/0:21,1:23:4.63:0,5,260	0/0:20,0:21:32.37:0,32,344	0/1:25,0:24:5.11:5,0,397	0/0:14,0:16:36.11:0,36,463	0/0:29,0:26:47.43:0,47,559	0/0:22,0:24:8.48:0,8,356	0/0:10,0:8:14.89:0,15,154	0/0:3,0:4:9.03:0,9,117	0/0:10,0:10:17.98:0,18,224	0/0:20,0:20:25.30:0,25,512	0/0:21,0:21:44.46:0,44,520	0/0:20,0:21:48.21:0,48,627	0/0:14,0:20:22.51:0,23,322	0/0:9,0:9:14.35:0,14,162
chr10	85596634	.	CA	C	1205.18	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.961;DP=782;FS=12.257;HRun=1;HaplotypeScore=71.1067;InbreedingCoeff=0.9912;MQ=57.03;MQ0=7;MQRankSum=3.848;QD=36.52;ReadPosRankSum=0.158;VQSLOD=2.7354;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,2001	0/0:11,0:11:33.11:0,33,521	0/0:23,0:11:30.05:0,30,451	0/0:26,0:16:45.10:0,45,623	0/0:23,0:23:60.20:0,60,959	0/0:15,0:15:42.14:0,42,672	1/1:0,33:33:93.31:1300,93,0	0/0:33,0:32:93.29:0,93,1404	0/0:44,0:44:99:0,132,2085	0/0:28,0:27:75.25:0,75,1180	0/0:23,0:22:66.23:0,66,1053	0/0:33,0:33:99:0,99,1530	0/0:30,0:30:90.31:0,90,1435	0/0:33,0:33:99:0,99,1555	0/0:48,0:48:99:0,144,2298	0/0:41,0:41:99:0,123,1922	0/0:33,0:33:96.33:0,96,1534	0/0:24,0:24:66.21:0,66,1029	0/0:18,0:16:45.13:0,45,674	0/0:19,0:19:57.19:0,57,911	0/0:49,0:49:99:0,141,2205	0/0:27,0:27:78.25:0,78,1224	0/0:23,0:23:69.23:0,69,1088	0/0:24,0:24:72.25:0,72,1147	0/0:14,0:14:42.14:0,42,666	0/0:29,0:29:81.26:0,81,1244	0/0:30,0:30:90.31:0,90,1434	0/0:6,0:6:18.06:0,18,288
chr10	85597051	.	CA	C	468.10	PASS	AB=0.963;AC=4;AF=0.071;AN=56;BaseQRankSum=6.449;DP=283;FS=10.418;HRun=2;HaplotypeScore=36.7524;InbreedingCoeff=0.3553;MQ=92.13;MQ0=5;MQRankSum=-0.194;QD=6.78;ReadPosRankSum=1.383;VQSLOD=-0.2096;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.18:0,54,809	0/0:3,0:3:9.03:0,9,134	0/1:27,0:17:7.42:7,0,333	0/1:21,2:12:26.83:27,0,138	0/0:4,0:4:12.03:0,12,160	0/0:14,0:14:42.14:0,42,629	1/1:1,15:16:42.14:545,42,0	0/0:10,0:10:24.08:0,24,360	0/0:2,0:2:6.02:0,6,90	0/0:7,0:7:18.05:0,18,252	0/0:6,0:6:18.06:0,18,269	0/0:14,0:14:42.13:0,42,608	0/0:6,0:6:18.04:0,18,249	0/0:7,0:7:21.07:0,21,313	0/0:13,0:13:39.13:0,39,584	0/0:15,0:15:36.11:0,36,521	0/0:20,0:20:60.20:0,60,899	0/0:16,0:16:45.15:0,45,674	0/0:8,0:8:18.06:0,18,270	0/0:2,0:2:6.02:0,6,90	0/0:6,0:6:18.06:0,18,270	0/0:6,0:6:18.06:0,18,270	0/0:4,0:4:12.04:0,12,180	0/0:4,0:4:9.03:0,9,135	0/0:4,0:4:12.04:0,12,180	0/0:8,0:8:24.07:0,24,342	0/0:13,0:13:39.12:0,39,565	0/0:3,0:3:9.03:0,9,135
chr10	85597604	.	T	TGG	1021.22	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.719;DP=691;FS=0.000;HRun=7;HaplotypeScore=84.8782;InbreedingCoeff=0.9688;MQ=88.93;MQ0=0;MQRankSum=-4.946;QD=30.95;ReadPosRankSum=-0.202;VQSLOD=3.4069;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:90.24:0,90,1038	0/0:5,0:5:12.04:0,12,140	0/0:24,0:24:50.08:0,50,543	0/0:32,0:32:58.43:0,58,708	0/0:19,0:19:47.77:0,48,520	0/0:16,0:16:45.13:0,45,524	1/1:5,27:33:55.88:1116,56,0	0/0:34,0:33:90.26:0,90,1041	0/0:25,0:25:66.16:0,66,747	0/0:27,0:27:66.18:0,66,766	0/0:17,0:17:36.07:0,36,408	0/0:37,0:37:99:0,102,1177	0/0:25,0:25:63.16:0,63,720	0/0:36,0:36:93.19:0,93,1056	0/0:37,0:37:90.25:0,90,1049	0/0:29,0:29:75.17:0,75,842	0/0:22,0:21:60.10:0,60,661	0/0:17,0:17:39.08:0,39,440	0/0:17,0:17:45.11:0,45,507	0/0:17,0:17:39.10:0,39,453	0/0:49,0:49:99:0,128,1501	0/0:12,0:12:36.11:0,36,418	0/0:16,0:16:38.93:0,39,432	0/0:28,0:28:78.21:0,78,898	0/0:14,0:14:39.11:0,39,454	0/0:25,0:25:72.19:0,72,819	0/0:31,0:31:75.17:0,75,859	0/0:9,0:9:27.08:0,27,314
chr10	85600093	.	GAA	G	535.39	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=5.467;DP=538;FS=4.232;HRun=10;HaplotypeScore=67.2154;InbreedingCoeff=0.7578;MQ=53.40;MQ0=27;MQRankSum=-0.417;QD=17.85;ReadPosRankSum=1.859;VQSLOD=2.4065;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,1:28:35.66:0,36,882	0/0:11,0:11:20.99:0,21,281	./.	0/0:27,0:4:1.88:0,2,8	0/0:20,0:21:52.09:0,52,761	0/0:16,0:16:36.06:0,36,455	1/1:7,22:29:59.78:630,60,0	0/0:25,0:23:57.08:0,57,803	0/0:4,0:4:9:0,9,117	0/0:10,0:10:12.02:0,12,148	0/0:15,0:14:27.08:0,27,391	0/0:12,0:12:24.07:0,24,350	0/0:8,0:8:12.04:0,12,190	0/0:14,0:14:21.03:0,21,300	0/0:24,0:24:41.22:0,41,622	0/0:17,0:16:35.06:0,35,509	0/0:40,0:40:90.26:0,90,1298	0/0:21,0:20:39.06:0,39,559	0/0:18,1:18:14.65:0,15,610	0/0:16,0:16:30.93:0,31,414	0/0:20,0:18:24.04:0,24,353	0/0:14,0:14:39:0,39,513	0/0:13,0:13:24.08:0,24,380	0/0:13,0:13:27.06:0,27,382	0/0:14,0:14:39.06:0,39,525	0/0:18,0:18:42.12:0,42,632	0/0:25,0:23:36.11:0,36,517	0/0:30,0:23:33.07:0,33,453
chr10	85601190	.	CCCCA	C	380.69	PASS	AB=1.000;AC=14;AF=0.333;AN=42;BaseQRankSum=0.624;DP=126;FS=6.109;HRun=0;HaplotypeScore=26.0188;InbreedingCoeff=0.4383;MQ=76.58;MQ0=6;MQRankSum=-0.663;QD=6.68;ReadPosRankSum=0.782;VQSLOD=0.2261;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:1.82:5,2,0	0/0:2,0:2:5.97:0,6,46	0/0:20,0:6:2.19:0,2,92	0/0:13,0:6:7.93:0,8,68	./.	0/0:3,0:3:3.01:0,3,74	0/0:3,0:3:9:0,9,89	0/1:8,0:8:0:0,0,0	0/0:2,0:2:3.01:0,3,73	./.	./.	0/0:4,0:4:3.01:0,3,74	0/0:2,0:1:0:0,0,0	./.	1/1:11,4:15:16.41:166,16,0	1/1:18,2:19:32.68:276,33,0	0/0:2,0:1:3:0,3,25	./.	0/0:2,0:1:0:0,0,0	1/1:3,0:2:0.89:2,1,0	1/1:2,0:2:3:26,3,0	0/1:1,0:1:0:0,0,0	./.	0/0:3,0:2:3:0,3,25	0/0:4,0:4:6.02:0,6,127	1/1:5,0:5:4.20:22,4,0	./.	0/0:3,0:3:3:0,3,27
chr10	85601193	.	CA	C	441.43	PASS	AB=1.000;AC=17;AF=0.370;AN=46;BaseQRankSum=2.613;DP=118;FS=5.037;HRun=1;HaplotypeScore=22.0340;InbreedingCoeff=0.5380;MQ=82.29;MQ0=6;MQRankSum=-0.854;QD=8.03;ReadPosRankSum=1.664;VQSLOD=1.0342;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:4:5.99:53,6,0	0/0:2,0:2:5.97:0,6,46	0/0:18,1:5:2.19:0,2,69	0/0:12,0:7:13.30:0,13,86	./.	0/0:3,0:3:6:0,6,65	0/0:3,0:3:8.99:0,9,73	1/1:3,0:3:2.90:16,3,0	0/0:2,0:2:6.01:0,6,64	./.	0/0:2,0:2:3.85:0,4,22	0/0:4,0:4:12.01:0,12,121	0/1:2,0:1:0:0,0,0	./.	1/1:12,2:14:31.54:183,32,0	1/1:20,0:19:35.44:206,35,0	0/0:2,0:1:3.01:0,3,40	0/0:2,0:2:2.97:0,3,20	0/0:2,0:1:0:0,0,0	0/1:2,0:1:0:0,0,0	1/1:3,0:3:9:76,9,0	./.	./.	0/0:3,0:2:5.99:0,6,49	0/0:4,0:4:6.02:0,6,79	1/1:4,0:4:3.84:21,4,0	1/1:2,0:2:2.99:24,3,0	0/1:1,0:1:0:0,0,0
chr10	85602367	.	T	TA	2759.75	PASS	AB=0.552;AC=12;AF=0.214;AN=56;BaseQRankSum=-9.925;DP=405;FS=0.444;HRun=10;HaplotypeScore=42.5651;InbreedingCoeff=0.8454;MQ=70.42;MQ0=9;MQRankSum=-2.391;QD=20.44;ReadPosRankSum=-0.331;VQSLOD=3.9927;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:44.90:0,45,366	0/0:5,0:5:11.98:0,12,99	0/0:7,0:6:16.01:0,16,108	0/0:14,0:11:17.12:0,17,117	0/0:20,0:20:47.93:0,48,394	0/0:19,0:19:43.69:0,44,325	0/0:8,0:8:19.35:0,19,89	1/1:13,25:32:50.53:726,51,0	0/0:11,0:11:17.93:0,18,145	0/0:15,0:15:38.95:0,39,320	0/0:16,0:16:38.92:0,39,315	0/0:9,0:10:23.01:0,23,178	0/0:7,0:7:14.96:0,15,123	0/0:10,0:10:26.97:0,27,222	0/0:9,0:9:26.97:0,27,222	0/0:13,0:13:32.95:0,33,271	0/0:26,0:26:68.81:0,69,550	0/0:17,0:17:41.74:0,42,333	0/1:7,22:30:1.90:573,0,2	0/1:1,6:7:3.63:155,0,4	1/1:1,7:8:18:180,18,0	0/0:11,0:11:23.97:0,24,197	0/0:11,0:11:29.93:0,30,240	0/0:6,0:6:14.94:0,15,118	0/0:15,0:15:35.92:0,36,290	1/1:3,18:21:51.09:532,51,0	1/1:2,17:19:23.74:455,24,0	1/1:1,11:12:30.08:320,30,0
chr10	85605840	.	A	AGATGAT	1293.29	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-0.757;DP=809;FS=0.000;HRun=0;HaplotypeScore=167.3877;InbreedingCoeff=0.7016;MQ=73.44;MQ0=0;MQRankSum=-5.138;QD=25.87;ReadPosRankSum=-1.883;VQSLOD=3.0446;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,138,2752	0/0:7,0:7:12.03:0,12,216	0/0:26,0:25:35.84:0,36,556	0/1:21,0:21:4.30:4,0,644	0/0:24,0:24:54.16:0,54,1065	0/0:27,0:27:69.23:0,69,1424	1/1:13,16:29:42.14:1387,42,0	0/0:26,0:26:36.11:0,36,709	0/0:38,0:38:87.25:0,87,1743	0/0:28,0:28:48.16:0,48,975	0/0:12,0:12:33.08:0,33,620	0/0:32,0:33:72.25:0,72,1502	0/0:25,0:25:72.24:0,72,1487	0/0:37,0:37:87.27:0,87,1762	0/0:34,0:35:81.26:0,81,1639	0/0:37,0:37:90.27:0,90,1757	0/0:26,0:26:69.24:0,69,1457	0/0:17,0:17:42.08:0,42,806	0/0:21,0:21:27.04:0,27,559	0/0:19,0:20:42.14:0,42,862	0/0:37,0:37:78.27:0,78,1650	0/0:31,0:31:51.14:0,51,964	0/0:22,0:22:54.11:0,54,947	0/0:31,0:31:84.19:0,84,1677	0/0:37,0:37:90.30:0,90,1865	0/0:39,0:39:99:0,99,2025	0/0:40,0:39:90.29:0,90,1831	0/0:25,0:25:75.21:0,75,1452
chr10	85607338	.	TA	T	2609.10	PASS	AB=0.836;AC=28;AF=0.500;AN=56;BaseQRankSum=3.169;DP=483;FS=3.057;HRun=12;HaplotypeScore=68.0950;InbreedingCoeff=0.6774;MQ=78.64;MQ0=5;MQRankSum=-0.091;QD=10.92;ReadPosRankSum=0.818;VQSLOD=3.3427;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,22:31:50.63:386,51,0	0/0:8,0:10:20:0,20,195	0/0:39,0:19:20.68:0,21,141	0/0:39,0:24:20.55:0,21,212	0/1:24,2:26:8.53:9,0,391	0/0:16,0:16:18.13:0,18,363	0/0:18,0:18:29.70:0,30,162	1/1:9,18:29:33.36:376,33,0	0/0:12,0:12:20.99:0,21,202	0/0:13,0:13:26.87:0,27,250	0/0:15,0:15:13.66:0,14,306	0/1:4,4:8:14.24:37,0,14	1/1:2,3:5:8.96:70,9,0	1/1:5,8:13:17.92:139,18,0	1/1:1,11:12:26.89:209,27,0	1/1:2,8:10:20.91:163,21,0	0/0:24,1:25:19.86:0,20,533	0/0:24,1:25:42.42:0,42,558	1/1:2,17:19:50.80:394,51,0	1/1:3,5:9:13.97:98,14,0	1/1:0,6:6:11.95:93,12,0	0/0:7,0:7:12.01:0,12,122	0/1:10,1:11:23.80:24,0,157	0/1:4,1:5:14.22:14,0,52	0/0:20,0:21:32.95:0,33,444	1/1:1,17:18:18.59:318,19,0	1/1:0,18:19:43.88:331,44,0	1/1:9,9:18:3.71:163,4,0
chr10	85607359	.	TAA	T	238.23	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=2.927;DP=486;FS=2.446;HRun=13;HaplotypeScore=81.3101;InbreedingCoeff=0.6209;MQ=77.03;MQ0=5;MQRankSum=-0.015;QD=4.04;ReadPosRankSum=1.412;VQSLOD=-0.5642;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:57.16:0,57,764	0/0:7,0:8:24.05:0,24,296	0/1:41,0:18:5.25:5,0,163	0/0:31,0:18:13.33:0,13,131	0/0:24,0:24:42.06:0,42,576	0/0:16,0:18:35.41:0,35,409	1/1:3,14:18:35.75:332,36,0	0/0:36,0:37:68.67:0,69,923	0/0:12,0:12:27.05:0,27,319	0/0:15,0:15:27.09:0,27,390	0/0:16,0:16:36.04:0,36,426	0/0:5,0:5:9.02:0,9,112	0/0:6,0:6:15.05:0,15,217	0/0:11,0:11:23.96:0,24,302	0/0:11,0:11:15.05:0,15,216	0/0:12,0:12:30.07:0,30,373	0/0:26,0:26:63.58:0,64,806	0/0:25,0:25:66.15:0,66,871	0/0:21,0:21:42.12:0,42,573	0/0:11,0:11:27.09:0,27,390	0/0:8,0:8:15.01:0,15,161	0/0:9,0:9:24.05:0,24,309	0/0:11,0:11:17.77:0,18,193	0/0:6,0:6:12.51:0,13,172	0/0:19,0:20:39.09:0,39,493	0/0:21,0:22:47.61:0,48,637	0/0:20,0:22:47.56:0,48,567	0/0:9,0:10:20.53:0,21,249
chr10	85608671	.	CT	C	451.40	PASS	AB=0.842;AC=12;AF=0.214;AN=56;BaseQRankSum=3.638;DP=613;FS=1.024;HRun=13;HaplotypeScore=76.1443;InbreedingCoeff=0.1390;MQ=82.60;MQ0=10;MQRankSum=0.762;QD=2.27;ReadPosRankSum=1.693;VQSLOD=-0.7526;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:44:63.54:0,64,337	0/0:3,0:3:6.01:0,6,58	0/0:58,1:31:30.33:0,30,267	0/1:53,0:26:11.65:12,0,75	0/1:21,3:24:15.01:15,0,323	0/0:17,0:17:22.37:0,22,314	0/1:5,9:14:3.28:133,0,3	0/0:27,0:29:15.64:0,16,301	0/0:16,3:19:1.18:0,1,306	0/0:22,0:22:42.07:0,42,409	0/0:14,1:16:14.05:0,14,277	0/0:12,4:17:4.30:0,4,173	0/0:13,0:12:9.43:0,9,112	0/0:14,1:15:14.15:0,14,297	1/1:1,16:18:28.88:203,29,0	1/1:0,7:7:17.90:131,18,0	0/0:42,5:47:8.97:0,9,795	0/0:24,2:27:17.26:0,17,524	0/0:26,1:27:59.79:0,60,536	0/1:8,1:9:20.75:21,0,114	0/1:9,3:13:48.47:48,0,85	0/1:14,2:16:1.61:2,0,242	0/0:10,1:11:2.12:0,2,178	0/1:19,3:23:32.14:32,0,311	0/0:12,0:12:24.01:0,24,223	0/0:21,1:22:35.17:0,35,499	0/1:17,4:21:5.64:6,0,429	0/0:13,0:13:7.20:0,7,207
chr10	85609548	.	G	GA	4317.73	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-11.988;DP=503;FS=15.403;HRun=8;HaplotypeScore=46.4671;InbreedingCoeff=0.9153;MQ=69.25;MQ0=0;MQRankSum=-0.680;QD=25.70;ReadPosRankSum=-3.571;VQSLOD=2.6911;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,102,928	0/0:4,0:4:12.01:0,12,110	0/0:14,0:14:29.97:0,30,271	0/1:10,0:10:5.18:5,0,136	0/0:16,0:17:35.05:0,35,308	0/0:21,0:19:56.95:0,57,512	0/0:17,0:17:48.03:0,48,439	1/1:7,36:43:83.65:1176,84,0	0/0:12,0:12:27.87:0,28,294	0/0:13,0:13:36.02:0,36,330	0/0:22,0:22:60.02:0,60,549	0/0:15,0:15:39.02:0,39,357	0/0:13,0:13:33:0,33,302	0/0:9,0:9:27.01:0,27,247	0/0:19,0:19:54.02:0,54,490	0/0:15,0:15:39.02:0,39,357	0/0:24,0:24:69.02:0,69,625	0/0:22,0:22:59.99:0,60,541	1/1:4,18:22:54.12:603,54,0	1/1:4,12:16:11.61:373,12,0	1/1:1,16:17:45.13:519,45,0	0/0:10,0:10:27.01:0,27,247	0/0:12,0:12:30.01:0,30,275	0/0:20,0:20:54.02:0,54,494	0/0:13,0:13:36.02:0,36,330	1/1:3,23:26:17.27:706,17,0	1/1:2,21:22:54.16:623,54,0	1/1:1,10:11:27.08:312,27,0
chr10	85609694	.	AAC	A	487.77	PASS	AB=0.923;AC=5;AF=0.089;AN=56;BaseQRankSum=5.230;DP=460;FS=2.250;HRun=0;HaplotypeScore=57.3942;InbreedingCoeff=0.7801;MQ=73.69;MQ0=1;MQRankSum=0.327;QD=14.78;ReadPosRankSum=0.538;VQSLOD=3.4486;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.22:0,84,1436	0/0:8,0:8:24.08:0,24,428	0/0:18,0:14:25.85:0,26,305	0/1:11,1:10:7.85:8,0,155	0/0:21,0:21:60.21:0,60,1083	0/0:14,0:14:39.12:0,39,669	0/0:9,0:9:21.07:0,21,365	0/0:30,0:29:78.23:0,78,1325	0/0:17,0:17:48.15:0,48,836	0/0:22,0:21:63.20:0,63,1082	0/0:20,0:20:57.18:0,57,1006	0/0:8,0:8:24.08:0,24,438	0/0:9,0:9:27.09:0,27,492	0/0:11,0:11:30.09:0,30,516	1/1:1,12:13:30.10:430,30,0	1/1:1,7:8:12.04:172,12,0	0/0:30,0:30:87.27:0,87,1512	0/0:19,0:19:54.14:0,54,920	0/0:25,0:25:74.99:0,75,1162	0/0:23,0:23:66.21:0,66,1141	0/0:12,0:12:33.10:0,33,571	0/0:9,0:9:24.07:0,24,395	0/0:18,0:18:54.15:0,54,924	0/0:5,0:5:15.05:0,15,250	0/0:19,0:19:57.17:0,57,998	0/0:13,0:13:39.13:0,39,709	0/0:19,0:19:57.13:0,57,943	0/0:17,0:17:45.15:0,45,819
chr10	85609804	.	G	GT	358.31	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.479;DP=446;FS=2.625;HRun=6;HaplotypeScore=46.2946;InbreedingCoeff=0.7750;MQ=65.33;MQ0=7;MQRankSum=-1.847;QD=25.59;ReadPosRankSum=-1.513;VQSLOD=2.7513;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.17:0,78,794	0/0:7,0:7:21.05:0,21,214	0/0:20,0:10:21.69:0,22,193	0/0:13,0:8:15:0,15,141	0/0:21,0:21:60.12:0,60,605	0/0:16,0:16:42.08:0,42,422	1/1:2,12:13:36.12:453,36,0	0/0:23,0:23:54.11:0,54,546	0/0:14,0:14:33.07:0,33,337	0/0:19,0:19:51.11:0,51,516	0/0:18,0:17:39.09:0,39,398	0/0:14,0:14:30.06:0,30,305	0/0:10,0:10:30.07:0,30,306	0/0:5,0:5:5.67:0,6,61	0/0:5,0:5:6.01:0,6,61	0/0:7,0:7:12.02:0,12,122	0/0:35,0:35:93.18:0,93,939	0/0:24,0:24:66.15:0,66,671	0/0:11,0:9:21.03:0,21,209	0/0:19,0:19:48.08:0,48,479	0/0:7,0:7:21.05:0,21,214	0/0:9,0:9:21.04:0,21,214	0/0:16,0:16:35.93:0,36,360	0/0:13,0:13:39.09:0,39,397	0/0:19,0:19:39.07:0,39,391	0/0:30,0:30:75.15:0,75,765	0/0:12,0:12:27.06:0,27,275	0/0:14,0:14:36.08:0,36,367
chr10	85610296	.	CGTGCGTGT	C	31.92	PASS	AB=1.000;AC=6;AF=0.115;AN=52;BaseQRankSum=-1.145;DP=459;FS=0.000;HRun=0;HaplotypeScore=132.8128;InbreedingCoeff=0.1283;MQ=52.53;MQ0=12;MQRankSum=2.744;QD=0.26;ReadPosRankSum=-3.016;VQSLOD=1.7536;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:25:2.98:22,3,0	0/0:7,0:5:12.03:0,12,422	./.	./.	0/0:17,0:17:42.03:0,42,806	0/0:15,0:15:30.31:0,30,409	0/1:20,0:20:3.76:4,0,128	0/0:17,0:15:18.15:0,18,144	0/0:14,0:14:35.93:0,36,622	0/0:15,0:14:32.91:0,33,485	0/0:11,0:11:28.42:0,28,459	0/0:17,0:17:23.64:0,24,224	0/0:8,0:6:9.99:0,10,145	0/0:28,0:28:38.99:0,39,302	0/1:17,0:17:45.98:46,0,274	0/1:17,0:17:32.52:33,0,282	0/0:25,0:25:38.50:0,39,1066	0/0:30,0:30:60.16:0,60,1486	0/0:15,0:13:21.72:0,22,315	0/0:5,0:5:10.95:0,11,63	0/1:43,0:40:39.99:40,0,88	0/0:16,0:15:32.93:0,33,492	0/0:18,0:18:14.06:0,14,828	0/0:28,0:28:25.94:0,26,1094	0/0:15,0:15:10.92:0,11,430	0/0:13,0:12:29.74:0,30,349	0/0:11,0:11:12:0,12,282	0/0:6,0:5:11.93:0,12,245
chr10	85610300	.	CGT	C	574.79	PASS	AB=0.877;AC=19;AF=0.352;AN=54;BaseQRankSum=2.564;DP=464;FS=23.312;HRun=0;HaplotypeScore=86.0459;InbreedingCoeff=-0.0211;MQ=52.54;MQ0=12;MQRankSum=0.227;QD=2.35;ReadPosRankSum=-0.791;VQSLOD=-0.1337;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,1:26:3.01:33,3,0	0/0:6,1:5:12.04:0,12,178	./.	0/0:3,0:1:3.01:0,3,37	0/1:17,0:17:3.83:4,0,360	0/1:11,4:15:47.57:48,0,196	0/1:15,2:17:10.99:11,0,184	0/1:12,5:15:8.04:80,0,8	0/0:14,0:14:8.03:0,8,316	0/1:13,0:12:9.04:9,0,194	0/1:10,2:11:16.25:16,0,193	0/0:16,0:16:7.54:0,8,51	0/0:9,0:7:10.15:0,10,65	0/0:29,0:29:11:0,11,113	0/1:18,0:18:12.62:13,0,115	0/0:15,2:17:9.78:0,10,80	0/1:22,6:28:99:137,0,506	0/1:25,5:30:94.86:95,0,738	1/1:14,0:13:4.36:38,4,0	1/1:2,3:5:5.76:68,6,0	0/0:41,1:39:8.20:0,8,50	0/0:14,1:14:15.05:0,15,222	0/0:17,0:17:23.43:0,23,302	0/0:29,1:30:24.08:0,24,671	0/0:17,0:17:18.05:0,18,245	0/1:7,8:14:19.41:139,0,19	0/1:11,0:11:18.13:26,0,18	1/1:4,2:5:4.74:16,5,0
chr10	85610302	.	T	TGCGTGC	2332.57	PASS	AB=0.968;AC=24;AF=0.429;AN=56;BaseQRankSum=5.327;DP=481;FS=21.174;HRun=0;HaplotypeScore=110.2000;InbreedingCoeff=0.0784;MQ=52.47;MQ0=13;MQRankSum=2.213;QD=6.84;ReadPosRankSum=-0.805;VQSLOD=0.8551;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:27:6:56,6,0	0/0:7,0:5:12.04:0,12,264	0/0:5,0:1:3.01:0,3,42	0/0:7,0:2:3.01:0,3,37	0/0:17,0:17:39.07:0,39,596	0/1:15,0:15:39.56:40,0,299	0/1:17,0:17:11.49:11,0,183	0/1:17,0:15:2.49:131,0,2	0/0:15,0:15:17.06:0,17,539	0/0:14,0:13:6:0,6,447	0/1:11,0:10:4.24:4,0,381	0/1:15,0:15:28.88:97,0,29	0/1:9,0:7:23.47:23,0,43	0/1:29,0:29:87.65:154,0,88	0/1:18,0:18:19.23:208,0,19	0/1:19,0:19:23.88:264,0,24	0/1:30,0:30:93.79:94,0,807	0/1:30,0:30:51.43:51,0,1094	1/1:7,6:12:7.83:287,8,0	1/1:5,0:5:9.03:127,9,0	0/1:19,21:47:10.14:34,0,10	0/0:15,0:14:33.11:0,33,552	0/0:16,0:16:36.11:0,36,672	0/0:28,0:28:39.17:0,39,1088	0/0:16,0:16:29.43:0,29,644	1/1:18,0:17:33.48:397,33,0	1/1:2,9:11:12.68:302,13,0	1/1:6,0:5:12.04:232,12,0
chr10	85613970	.	TGTGAAG	T	86.34	PASS	AB=0.500;AC=15;AF=0.750;AN=20;BaseQRankSum=1.271;DP=16;FS=0.000;HRun=0;HaplotypeScore=60.4842;InbreedingCoeff=0.2913;MQ=29.00;MQ0=0;MQRankSum=0.898;QD=7.85;ReadPosRankSum=0.898;VQSLOD=1.4486;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,2:2:2.80:14,3,0	./.	./.	./.	1/1:0,1:1:0.47:1,0,0	./.	./.	1/1:0,2:2:4.77:25,5,0	./.	./.	0/0:0,1:1:0.89:0,1,2	./.	./.	1/1:0,1:1:2.90:16,3,0	1/1:0,1:1:1.55:4,2,0	./.	./.	./.	0/1:0,1:1:0:0,0,0	./.	./.	./.	0/0:0,2:2:1.82:0,2,5	./.	./.	1/1:0,1:1:3.01:45,3,0	1/1:0,2:2:5.38:55,5,0
chr10	85613980	.	CACCAA	C	52.82	PASS	AB=0.500;AC=15;AF=0.625;AN=24;BaseQRankSum=1.774;DP=22;FS=5.643;HRun=0;HaplotypeScore=53.4520;InbreedingCoeff=0.3511;MQ=59.95;MQ0=0;MQRankSum=0.231;QD=4.80;ReadPosRankSum=1.929;VQSLOD=0.2249;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:0,1:1:0:0,0,0	1/1:0,2:2:2.84:15,3,0	0/0:2,0:1:3.01:0,3,45	./.	./.	0/0:0,1:1:2.04:0,2,6	./.	./.	1/1:0,2:2:5.30:25,5,0	./.	./.	1/1:0,1:1:1.25:3,1,0	./.	./.	1/1:0,1:1:2.50:9,2,0	1/1:0,1:1:0.89:2,1,0	./.	./.	./.	0/0:0,1:1:2.22:0,2,7	./.	./.	./.	./.	0/0:0,1:1:0.89:0,1,2	./.	1/1:0,1:1:3.01:36,3,0	1/1:0,2:2:5.69:49,6,0
chr10	85614000	.	T	TAAG	481.54	PASS	AB=0.907;AC=27;AF=0.563;AN=48;BaseQRankSum=1.463;DP=141;FS=12.103;HRun=0;HaplotypeScore=119.1957;InbreedingCoeff=0.2337;MQ=33.17;MQ0=17;MQRankSum=0.209;QD=4.72;ReadPosRankSum=3.345;VQSLOD=1.8594;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,1:2:0.89:2,1,0	0/1:3,2:5:0.30:0,0,0	0/0:7,0:1:3.01:0,3,55	0/0:7,0:1:3.01:0,3,43	./.	1/1:7,1:7:2.05:51,2,0	0/0:2,0:2:2.74:0,3,12	1/1:6,0:6:8.15:88,8,0	1/1:10,1:8:8.07:72,8,0	0/0:2,0:2:3.99:0,4,16	1/1:6,0:5:2.84:9,3,0	1/1:5,1:5:2.88:15,3,0	0/0:3,0:3:1.82:0,2,5	./.	1/1:5,1:6:3.65:47,4,0	0/1:5,1:6:1.36:24,0,1	./.	1/1:2,0:2:1.21:5,1,0	0/1:9,0:7:0.41:53,0,0	0/0:5,1:5:2.94:0,3,18	0/0:4,0:1:3.01:0,3,55	0/1:3,0:2:0:0,0,0	0/1:4,0:4:0:0,0,0	./.	1/1:5,1:6:0.08:0,0,0	0/1:11,0:10:17.94:119,0,18	1/1:3,1:4:1.93:54,2,0	0/1:5,2:6:3.07:57,0,3
chr10	85621812	.	A	AC	913.12	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.452;DP=742;FS=0.000;HRun=3;HaplotypeScore=75.7207;InbreedingCoeff=0.9993;MQ=78.47;MQ0=0;MQRankSum=1.124;QD=30.44;ReadPosRankSum=-0.124;VQSLOD=3.1507;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,135,1615	0/0:13,0:13:33.10:0,33,395	0/0:18,0:18:43.49:0,43,497	0/0:21,0:21:54.09:0,54,620	0/0:17,0:17:36.11:0,36,432	0/0:24,0:24:63.19:0,63,755	1/1:2,28:30:72.24:1008,72,0	0/0:19,0:19:51.13:0,51,598	0/0:22,0:22:66.20:0,66,792	0/0:39,0:39:99:0,114,1367	0/0:14,0:14:39.12:0,39,466	0/0:29,0:29:87.27:0,87,1042	0/0:28,0:28:81.22:0,81,957	0/0:32,0:32:87.26:0,87,1039	0/0:32,0:32:87.27:0,87,1040	0/0:35,0:35:90.25:0,90,1066	0/0:35,0:35:99:0,102,1224	0/0:13,0:13:36.11:0,36,432	0/0:28,0:28:78.23:0,78,925	0/0:25,0:25:69.16:0,69,800	0/0:56,0:56:99:0,153,1812	0/0:21,0:21:45.14:0,45,539	0/0:21,0:21:57.17:0,57,681	0/0:29,0:29:84.20:0,84,980	0/0:19,0:19:54.15:0,54,634	0/0:32,0:32:87.26:0,87,1033	0/0:27,0:27:75.23:0,75,899	0/0:15,0:15:36.11:0,36,427
chr10	85622551	.	ATG	A	538.79	PASS	AB=0.967;AC=17;AF=0.340;AN=50;BaseQRankSum=0.575;DP=557;FS=0.000;HRun=0;HaplotypeScore=109.7649;InbreedingCoeff=0.3212;MQ=47.19;MQ0=18;MQRankSum=0.655;QD=2.34;ReadPosRankSum=-0.435;VQSLOD=2.1834;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:2.98:0,3,11	0/0:9,0:9:3.01:0,3,43	./.	./.	0/1:22,0:22:0.21:0,0,0	1/1:20,2:19:6.27:57,6,0	0/0:32,0:30:2.35:0,2,26	0/0:11,0:10:6.78:0,7,39	1/1:17,1:19:13.91:108,14,0	0/0:26,0:22:2.41:0,2,90	1/1:12,0:12:2.99:25,3,0	1/1:9,0:9:0.47:1,0,0	0/0:9,0:9:2.44:0,2,19	0/1:21,0:16:0.11:0,0,18	0/0:16,0:16:3.65:0,4,25	0/0:11,0:10:0.47:0,0,1	0/1:30,1:31:47.06:47,0,193	0/0:22,0:22:16.57:0,17,145	./.	0/0:13,0:12:2.97:0,3,23	0/0:48,0:46:0.25:0,0,1	1/1:21,2:23:11.05:99,11,0	1/1:8,0:7:3:29,3,0	0/1:38,4:41:0.48:188,0,0	0/1:20,1:21:1.28:114,0,1	0/0:12,0:12:6.92:0,7,50	0/0:12,0:12:1.72:0,2,4	0/0:12,0:11:3.48:0,3,39
chr10	85622642	.	T	TA	15889.32	PASS	AB=0.903;AC=54;AF=0.964;AN=56;BaseQRankSum=3.621;DP=480;FS=3.419;HRun=1;HaplotypeScore=212.1290;InbreedingCoeff=-0.0417;MQ=85.09;MQ0=0;MQRankSum=-8.397;QD=33.10;ReadPosRankSum=3.609;VQSLOD=4.4500;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,13:18:33.04:447,33,0	1/1:2,8:10:21.06:301,21,0	0/1:20,2:22:36.78:37,0,430	0/1:21,3:24:88.56:89,0,445	1/1:0,12:12:36.08:476,36,0	1/1:1,19:20:59.96:774,60,0	1/1:5,13:18:50.67:613,51,0	1/1:7,23:29:77.25:1127,77,0	1/1:5,21:26:75.02:956,75,0	1/1:1,20:21:60.20:885,60,0	1/1:3,8:11:30.02:406,30,0	1/1:1,10:11:33.04:445,33,0	1/1:0,5:5:15.05:217,15,0	1/1:1,13:14:42:552,42,0	1/1:5,27:32:90.27:1278,90,0	1/1:1,21:21:63.21:914,63,0	1/1:1,12:13:36.12:519,36,0	1/1:3,3:6:5.77:89,6,0	1/1:3,9:12:33.08:462,33,0	1/1:2,12:14:33.05:456,33,0	1/1:3,9:12:30.05:400,30,0	1/1:4,16:20:42.08:560,42,0	1/1:4,15:19:34.93:671,35,0	1/1:3,21:23:48.03:629,48,0	1/1:2,21:23:66.09:906,66,0	1/1:2,10:12:33.11:487,33,0	1/1:1,17:18:54.13:749,54,0	1/1:1,9:10:30.10:445,30,0
chr10	85622643	.	AC	A	5777.65	PASS	AB=0.982;AC=49;AF=0.875;AN=56;BaseQRankSum=4.865;DP=480;FS=13.819;HRun=1;HaplotypeScore=246.2337;InbreedingCoeff=0.3758;MQ=85.73;MQ0=0;MQRankSum=-7.959;QD=13.34;ReadPosRankSum=10.782;VQSLOD=1.6670;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,2:17:24.01:218,24,0	1/1:8,1:9:0.31:134,0,0	0/0:21,2:23:37.37:0,37,481	0/0:24,0:24:45.23:0,45,465	1/1:12,0:12:35.03:205,35,0	1/1:20,0:20:13.29:232,13,0	0/1:17,1:18:14.27:182,0,14	1/1:27,0:26:76.69:534,77,0	1/1:25,1:26:28.44:339,28,0	1/1:20,1:21:44.49:299,44,0	0/1:11,0:11:8.78:110,0,9	1/1:11,0:11:24.08:202,24,0	1/1:5,0:5:14.70:90,15,0	1/1:13,1:14:11.79:175,12,0	1/1:33,1:34:47.73:452,48,0	1/1:23,0:22:56.51:355,57,0	1/1:13,0:13:31.46:202,31,0	1/1:6,0:6:5.48:35,5,0	0/1:12,0:12:30.96:144,0,31	1/1:14,0:14:9.94:155,10,0	1/1:11,1:12:1.53:123,2,0	1/1:19,0:19:3.90:153,4,0	1/1:20,0:20:23.76:265,24,0	1/1:25,0:24:30.62:207,31,0	1/1:23,0:23:38.97:312,39,0	1/1:12,0:12:32.28:193,32,0	1/1:18,0:18:48.35:292,48,0	1/1:10,0:10:29.27:172,29,0
chr10	85668899	.	CTT	C	3473.35	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=7.423;DP=421;FS=7.330;HRun=8;HaplotypeScore=71.9847;InbreedingCoeff=0.8441;MQ=63.74;MQ0=7;MQRankSum=-2.594;QD=13.26;ReadPosRankSum=1.393;VQSLOD=0.4810;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,2:23:16.89:194,17,0	1/1:8,0:8:11.79:90,12,0	0/0:37,0:16:24.24:0,24,294	0/0:25,0:14:25.36:0,25,261	0/0:25,0:25:66:0,66,912	0/0:9,0:9:21.03:0,21,289	1/1:7,1:8:2.44:98,2,0	1/1:20,3:23:60.95:508,61,0	0/0:10,0:9:24.04:0,24,349	1/1:16,0:15:22.61:285,23,0	1/1:9,1:10:16.75:119,17,0	1/1:8,1:8:11.65:133,12,0	1/1:9,0:9:18.61:160,19,0	1/1:15,0:15:13.01:144,13,0	1/1:14,0:13:5.84:41,6,0	1/1:8,0:8:10.89:50,11,0	1/1:21,0:19:31.83:163,32,0	1/1:22,1:22:33.33:225,33,0	1/1:15,5:17:30.25:290,30,0	1/1:8,2:10:20.79:224,21,0	1/1:11,1:12:6.50:161,7,0	0/0:8,0:8:18.02:0,18,248	0/0:7,0:7:18.02:0,18,231	0/0:15,0:15:35.62:0,36,458	0/0:22,0:21:51.13:0,51,751	1/1:8,1:9:21.06:250,21,0	0/1:13,0:13:7.68:146,0,8	1/1:9,1:10:18.04:192,18,0
chr10	85668902	.	T	TTTTC	7470.12	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=1.175;DP=416;FS=3.658;HRun=0;HaplotypeScore=80.5378;InbreedingCoeff=0.8650;MQ=62.23;MQ0=8;MQRankSum=-3.705;QD=29.29;ReadPosRankSum=1.527;VQSLOD=4.6886;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:21,2:22:28.91:535,29,0	1/1:7,1:8:12.04:249,12,0	0/0:36,0:15:28.67:0,29,367	0/0:27,0:14:16.28:0,16,252	0/0:29,0:29:66.14:0,66,1099	0/0:9,0:9:21.03:0,21,352	1/1:9,0:9:18.04:300,18,0	1/1:24,0:24:69.40:797,69,0	0/0:9,0:8:24.04:0,24,366	1/1:5,11:16:41.15:762,41,0	1/1:5,4:9:17.73:336,18,0	1/1:9,0:8:18.05:281,18,0	1/1:8,0:8:20.88:309,21,0	1/1:17,0:17:23.83:354,24,0	1/1:3,8:10:6.02:128,6,0	1/1:9,0:8:12.03:183,12,0	1/1:18,3:19:39.06:683,39,0	1/1:22,2:23:32.19:785,32,0	1/1:16,0:13:32.02:369,32,0	1/1:9,0:9:20.01:286,20,0	1/1:9,0:9:0.30:246,0,0	0/0:8,0:8:18.03:0,18,296	0/0:7,0:7:18.02:0,18,294	0/0:15,0:15:36.39:0,36,576	0/0:21,0:20:51.14:0,51,857	1/1:9,0:9:21.06:344,21,0	0/1:13,0:13:5.13:245,0,5	1/1:10,0:10:22.38:278,22,0
chr10	85668905	.	T	TC	2110.41	PASS	AB=0.883;AC=31;AF=0.554;AN=56;BaseQRankSum=8.460;DP=416;FS=1.524;HRun=0;HaplotypeScore=71.8575;InbreedingCoeff=0.4815;MQ=60.54;MQ0=10;MQRankSum=-2.425;QD=8.21;ReadPosRankSum=4.764;VQSLOD=3.6942;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,13:24:6.65:191,7,0	1/1:2,5:8:12.03:124,12,0	0/0:36,0:15:34.57:0,35,329	0/0:26,0:13:19.27:0,19,204	0/0:30,0:29:74.98:0,75,965	0/0:8,0:8:21.03:0,21,271	1/1:2,7:9:12.14:112,12,0	0/1:27,0:27:19.44:155,0,19	0/0:9,0:8:24.04:0,24,312	1/1:13,1:13:7.93:162,8,0	1/1:7,2:9:7.30:101,7,0	1/1:5,4:8:10.26:81,10,0	1/1:4,3:7:18.46:145,18,0	1/1:2,14:17:22.34:213,22,0	0/1:7,2:7:13.94:50,0,14	0/1:4,6:8:5.53:96,0,6	0/1:16,8:22:0.26:224,0,0	1/1:11,13:24:20.20:270,20,0	1/1:16,0:13:14.92:97,15,0	1/1:8,0:8:9.09:60,9,0	0/1:8,0:8:18.80:47,0,19	0/0:6,0:6:18.03:0,18,230	0/0:8,0:8:18.02:0,18,228	0/0:16,0:16:38.42:0,38,460	0/0:20,0:19:51.14:0,51,690	1/1:9,0:9:10.81:92,11,0	0/1:14,0:14:17.25:40,0,17	0/1:8,0:8:18.79:51,0,19
chr10	85668910	.	T	TC	189.72	PASS	AB=0.815;AC=10;AF=0.179;AN=56;BaseQRankSum=4.462;DP=417;FS=0.682;HRun=0;HaplotypeScore=80.4349;InbreedingCoeff=0.3193;MQ=55.64;MQ0=16;MQRankSum=-0.196;QD=1.72;ReadPosRankSum=2.484;VQSLOD=2.0149;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,4:24:32.27:32,0,53	1/1:5,2:7:5.69:57,6,0	0/0:35,0:12:23.49:0,23,244	0/0:25,0:11:11.87:0,12,112	0/0:28,0:27:68.65:0,69,597	0/0:10,0:9:18.03:0,18,182	0/0:8,0:8:5.19:0,5,23	0/0:27,0:27:64.27:0,64,384	0/0:7,0:6:15.02:0,15,148	0/0:13,0:12:5.06:0,5,47	0/1:7,2:9:17.51:18,0,41	0/0:9,0:8:8.12:0,8,36	0/0:9,0:9:13.80:0,14,78	0/0:14,0:14:2.31:0,2,33	1/1:8,2:7:1.19:31,1,0	1/1:7,3:7:1.65:19,2,0	0/1:17,6:21:1.73:117,0,2	0/1:18,5:24:25.03:51,0,25	0/0:15,0:11:30.64:0,31,189	0/0:10,0:10:20.30:0,20,136	0/0:8,0:8:20.32:0,20,128	0/0:7,0:7:20.92:0,21,184	0/0:10,0:10:17.92:0,18,141	0/0:15,0:15:33.12:0,33,346	0/0:20,0:19:50.21:0,50,460	0/0:11,0:11:24.31:0,24,106	0/0:17,0:17:27.82:0,28,198	0/0:9,0:8:16.98:0,17,130
chr10	85668912	.	T	TTC	2476.01	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=7.436;DP=421;FS=15.999;HRun=0;HaplotypeScore=76.9549;InbreedingCoeff=0.3550;MQ=53.85;MQ0=18;MQRankSum=-1.277;QD=8.51;ReadPosRankSum=3.354;VQSLOD=2.1195;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:25:7.44:111,0,7	1/1:7,0:7:10.92:54,11,0	0/0:36,0:11:12.77:0,13,155	0/1:27,0:10:14.43:14,0,72	0/0:27,0:26:65.82:0,66,642	0/0:11,0:10:21:0,21,228	1/1:7,0:7:4.56:71,5,0	1/1:24,3:27:31.44:498,31,0	0/0:6,0:5:15.01:0,15,151	0/1:12,0:11:22.56:87,0,23	1/1:10,0:10:10.74:60,11,0	1/1:9,0:8:11.74:109,12,0	1/1:9,0:9:5.07:121,5,0	0/1:15,0:15:7.85:118,0,8	0/1:9,0:6:13.69:14,0,28	0/1:10,0:7:5.55:16,0,6	1/1:24,0:22:1.41:138,1,0	0/1:26,0:25:38.54:132,0,39	1/1:15,0:11:11.48:163,11,0	1/1:10,0:10:16.99:180,17,0	0/1:8,0:8:1.27:161,0,1	0/0:7,0:7:20.95:0,21,199	0/0:10,0:10:23.85:0,24,186	0/0:15,0:15:31.63:0,32,389	0/0:18,0:17:41.27:0,41,415	1/1:11,1:12:22.81:210,23,0	0/1:17,0:17:2.08:147,0,2	1/1:10,0:9:18.72:262,19,0
chr10	85668913	.	T	TC	937.80	PASS	AB=0.982;AC=22;AF=0.393;AN=56;BaseQRankSum=4.420;DP=428;FS=52.865;HRun=0;HaplotypeScore=75.3190;InbreedingCoeff=-0.0600;MQ=52.23;MQ0=19;MQRankSum=2.640;QD=3.35;ReadPosRankSum=0.316;VQSLOD=0.6599;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:25:15.03:15,0,87	0/1:7,0:7:0.38:0,0,4	0/0:35,0:10:13.36:0,13,149	0/1:27,0:10:16.17:16,0,63	0/0:27,0:26:65.81:0,66,607	0/0:11,0:10:26.95:0,27,248	0/1:7,0:7:15.57:16,0,16	0/1:23,4:27:31.56:205,0,32	0/0:6,0:5:15.01:0,15,148	0/1:12,0:11:34.50:54,0,35	0/1:11,0:11:21.71:22,0,23	1/1:9,1:9:10.34:81,10,0	0/1:9,0:9:24.44:51,0,24	0/1:15,0:15:18.65:19,0,24	0/0:9,0:6:6.39:0,6,53	0/0:10,0:7:11.09:0,11,54	0/1:23,1:22:16.75:17,0,115	0/1:26,0:25:29.20:29,0,136	1/1:12,3:11:2.63:142,3,0	0/1:11,1:11:0.37:95,0,0	0/1:9,0:9:17.17:65,0,17	0/0:7,0:7:20.95:0,21,188	0/0:10,0:10:23.87:0,24,183	0/0:14,0:15:33.87:0,34,368	0/0:18,0:17:41.42:0,41,399	1/1:11,1:12:15.13:164,15,0	0/1:17,0:17:26.91:27,0,88	1/1:13,0:12:0.44:86,0,0
chr10	85669144	.	C	CTTCA	5993.22	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-12.369;DP=709;FS=8.506;HRun=0;HaplotypeScore=108.8368;InbreedingCoeff=0.9960;MQ=83.75;MQ0=0;MQRankSum=-1.496;QD=61.79;ReadPosRankSum=1.483;VQSLOD=6.9560;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,154,2825	0/0:14,0:14:36.12:0,36,663	0/0:24,0:24:63.21:0,63,1108	0/0:23,0:23:33.37:0,33,788	0/0:14,0:14:30.09:0,30,529	0/0:24,0:24:66.23:0,66,1225	0/0:34,0:34:87.27:0,87,1550	0/0:36,0:36:93.31:0,93,1692	0/0:15,0:15:39.12:0,39,689	0/0:29,0:29:78.26:0,78,1413	0/0:11,0:11:27.09:0,27,502	0/0:31,0:31:90.25:0,90,1612	0/0:27,0:27:78.27:0,78,1433	0/0:27,0:27:75.24:0,75,1361	1/1:5,28:35:81.23:2075,81,0	1/1:1,25:28:60.21:1599,60,0	0/0:36,0:36:99:0,102,1871	1/1:1,32:34:87.30:2319,87,0	0/0:10,0:10:27.09:0,27,499	0/0:20,0:20:51.17:0,51,951	0/0:44,0:44:99:0,123,2206	0/0:18,0:18:48.16:0,48,870	0/0:10,0:10:18.06:0,18,335	0/0:39,0:39:99:0,111,1981	0/0:16,0:16:42.11:0,42,749	0/0:19,0:19:54.18:0,54,979	0/0:26,0:26:66.20:0,66,1196	0/0:12,0:12:33.11:0,33,616
chr10	85669521	.	GA	G	1088.21	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.319;DP=480;FS=4.137;HRun=1;HaplotypeScore=94.5839;InbreedingCoeff=0.8619;MQ=76.69;MQ0=6;MQRankSum=-4.782;QD=11.96;ReadPosRankSum=1.879;VQSLOD=2.4029;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,15:37:46.95:383,47,0	1/1:7,3:10:19.44:181,19,0	0/0:42,0:21:13.95:0,14,279	0/0:41,0:28:5.48:0,5,330	0/0:6,0:6:2.95:0,3,24	0/0:12,0:11:20.89:0,21,215	0/0:18,0:18:40.33:0,40,274	0/0:29,0:29:56.02:0,56,453	0/0:10,0:10:20.95:0,21,183	1/1:4,7:11:15.94:150,16,0	1/1:7,2:9:8.88:69,9,0	0/0:26,0:26:60.27:0,60,398	0/0:27,0:27:54.92:0,55,303	0/0:19,0:19:41.03:0,41,236	0/0:28,0:28:61.13:0,61,406	0/0:25,0:24:48.33:0,48,287	1/1:5,10:15:44.27:351,44,0	1/1:0,9:9:14.99:134,15,0	0/0:15,0:15:29.45:0,29,166	0/0:7,0:7:8.91:0,9,75	0/0:13,0:12:8.88:0,9,80	0/0:9,0:9:11.86:0,12,93	0/0:9,0:9:11.95:0,12,110	0/0:11,0:11:21.36:0,21,194	0/0:8,0:8:12.42:0,12,98	0/0:11,0:11:16.96:0,17,114	0/0:12,0:12:21.93:0,22,154	0/0:10,0:10:7.55:0,8,54
chr10	85669531	.	GGGGA	G	5741.31	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=6.009;DP=474;FS=9.922;HRun=0;HaplotypeScore=92.5285;InbreedingCoeff=0.6844;MQ=71.51;MQ0=4;MQRankSum=-3.775;QD=17.83;ReadPosRankSum=6.226;VQSLOD=3.2258;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,15:34:48.26:446,48,0	1/1:9,2:11:17.80:191,18,0	0/0:31,0:14:34.49:0,34,536	0/0:31,0:21:32.07:0,32,552	0/0:11,0:11:25.99:0,26,331	0/0:17,0:16:42.09:0,42,735	1/1:0,13:13:18.01:288,18,0	1/1:21,0:21:1.45:178,1,0	0/0:9,0:9:24.03:0,24,349	1/1:10,6:16:38.04:392,38,0	1/1:5,2:7:1.55:4,2,0	1/1:0,22:22:45.11:779,45,0	1/1:1,24:25:51.17:900,51,0	1/1:0,16:16:45.11:776,45,0	1/1:26,0:26:43.15:227,43,0	1/1:23,2:24:44.78:279,45,0	1/1:4,10:14:35.11:416,35,0	0/1:13,0:13:73.10:139,0,73	1/1:21,0:21:57.79:380,58,0	1/1:9,0:9:13.72:107,14,0	0/1:16,0:15:44.69:45,0,61	0/0:16,0:17:48.07:0,48,707	0/0:10,0:10:24.03:0,24,432	0/0:13,0:13:33.06:0,33,661	0/0:10,0:10:27.07:0,27,476	1/1:12,0:12:9.91:149,10,0	0/1:9,0:9:33.02:33,0,63	1/1:12,0:12:2.84:14,3,0
chr10	85669532	.	GGGA	G	6425.38	PASS	AB=0.938;AC=35;AF=0.648;AN=54;BaseQRankSum=6.763;DP=473;FS=9.280;HRun=0;HaplotypeScore=82.3010;InbreedingCoeff=0.8616;MQ=68.86;MQ0=3;MQRankSum=-5.023;QD=20.33;ReadPosRankSum=6.284;VQSLOD=3.7263;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,17:34:53.01:516,53,0	1/1:5,6:11:18.01:218,18,0	0/0:30,0:13:32.06:0,32,410	0/0:31,0:19:29.35:0,29,450	0/0:12,0:12:25.99:0,26,291	0/0:17,0:16:42.05:0,42,591	1/1:13,0:13:17.98:158,18,0	1/1:20,0:21:50.49:383,50,0	0/0:10,0:10:27.02:0,27,310	1/1:15,1:16:42.07:489,42,0	./.	1/1:22,0:22:45.02:415,45,0	1/1:25,0:25:51.06:477,51,0	1/1:16,0:16:45.01:412,45,0	1/1:0,25:25:45.07:656,45,0	1/1:4,21:24:51.06:708,51,0	1/1:14,0:14:39.04:460,39,0	1/1:12,2:14:1.67:245,2,0	1/1:0,21:21:62.21:696,62,0	1/1:9,0:9:23.62:181,24,0	0/1:14,1:15:8.45:62,0,8	0/0:18,0:18:51.04:0,51,602	0/0:10,0:10:24.02:0,24,339	0/0:13,0:13:32.79:0,33,525	0/0:10,0:10:27.06:0,27,382	1/1:12,1:13:30.68:225,31,0	1/1:9,1:10:10.84:114,11,0	1/1:12,0:12:2.49:9,2,0
chr10	85669533	.	GGA	G	5511.21	PASS	AC=36;AF=0.667;AN=54;BaseQRankSum=6.876;DP=469;FS=10.599;HRun=0;HaplotypeScore=79.6528;InbreedingCoeff=0.9643;MQ=70.15;MQ0=3;MQRankSum=-3.051;QD=17.44;ReadPosRankSum=5.773;VQSLOD=3.9557;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,2:34:55.45:405,55,0	1/1:11,0:11:17.94:148,18,0	0/0:28,0:13:16.01:0,16,284	0/0:28,0:18:34.71:0,35,371	0/0:14,0:14:31.97:0,32,283	0/0:17,0:16:42.04:0,42,468	1/1:13,0:13:17.91:143,18,0	1/1:15,4:20:56.95:573,57,0	0/0:9,0:9:23.99:0,24,227	1/1:16,0:16:41.34:345,41,0	./.	1/1:22,0:22:44.77:332,45,0	1/1:25,0:25:50.78:392,51,0	1/1:16,0:16:44.74:330,45,0	1/1:25,0:25:44.77:336,45,0	1/1:25,0:24:50.75:382,51,0	1/1:14,0:14:38.92:328,39,0	1/1:11,3:14:16.29:258,16,0	1/1:21,0:21:62.01:475,62,0	1/1:10,0:10:26.83:206,27,0	1/1:13,0:13:29.95:300,30,0	0/0:18,0:18:48.02:0,48,498	0/0:11,0:11:27.01:0,27,312	0/0:13,0:13:32.65:0,33,406	0/0:9,0:9:23.95:0,24,275	1/1:1,12:13:32.66:296,33,0	1/1:12,0:12:23.20:222,23,0	1/1:1,11:12:3.01:40,3,0
chr10	85669534	.	GA	G	4652.86	PASS	AC=36;AF=0.667;AN=54;BaseQRankSum=8.613;DP=474;FS=14.632;HRun=3;HaplotypeScore=77.6864;InbreedingCoeff=0.9626;MQ=71.17;MQ0=2;MQRankSum=-4.305;QD=14.59;ReadPosRankSum=5.240;VQSLOD=3.0462;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:55.50:364,56,0	1/1:10,1:11:17.85:130,18,0	0/0:24,0:12:12.23:0,12,238	0/0:26,0:18:20.22:0,20,292	0/0:15,0:15:31.96:0,32,255	0/0:17,0:16:32.69:0,33,294	1/1:13,0:13:17.47:100,17,0	1/1:21,1:22:59.15:436,59,0	0/0:9,0:9:23.99:0,24,215	1/1:15,2:17:44.76:341,45,0	./.	1/1:22,0:22:43.75:249,44,0	1/1:25,0:25:49.49:277,49,0	1/1:16,0:16:43.60:246,44,0	1/1:25,0:25:43.90:260,44,0	1/1:24,1:24:49.77:300,50,0	1/1:14,0:14:38.48:262,38,0	1/1:15,0:15:38.82:303,39,0	1/1:21,0:21:61.88:475,62,0	1/1:10,1:11:26.85:206,27,0	1/1:11,0:11:26.69:191,27,0	0/0:18,0:18:47.98:0,48,426	0/0:12,0:12:26.94:0,27,236	0/0:13,0:13:22.86:0,23,293	0/0:13,0:13:27.99:0,28,271	1/1:13,0:13:32.29:221,32,0	1/1:9,2:12:35.68:274,36,0	1/1:12,0:12:2.92:17,3,0
chr10	85669685	.	CT	C	10188.20	PASS	AB=0.867;AC=39;AF=0.696;AN=56;BaseQRankSum=10.947;DP=707;FS=4.693;HRun=10;HaplotypeScore=78.5184;InbreedingCoeff=0.8938;MQ=71.54;MQ0=0;MQRankSum=-0.051;QD=19.30;ReadPosRankSum=3.569;VQSLOD=5.7606;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,33:37:41.47:750,41,0	1/1:4,10:14:20.98:182,21,0	0/1:11,2:12:26:26,0,129	0/0:20,1:21:5.37:0,5,194	0/0:26,0:26:63.62:0,64,683	0/0:21,0:21:54.09:0,54,575	1/1:1,21:22:56.99:495,57,0	1/1:5,17:23:49.99:414,50,0	0/0:19,1:20:25.06:0,25,495	1/1:3,25:28:38.78:563,39,0	1/1:2,22:24:62.97:547,63,0	1/1:3,35:38:59.74:748,60,0	1/1:4,22:26:20.70:409,21,0	1/1:2,27:29:77.98:677,78,0	1/1:4,32:36:23.62:663,24,0	1/1:8,26:34:62.98:547,63,0	1/1:5,25:30:71.98:625,72,0	1/1:2,22:24:29.81:488,30,0	1/1:2,15:17:44.96:386,45,0	1/1:3,25:28:33.11:509,33,0	1/1:5,32:37:86.97:755,87,0	0/0:25,0:25:57.15:0,57,623	0/0:22,0:22:48.13:0,48,531	0/0:29,0:29:75.15:0,75,795	0/0:13,0:15:41.76:0,42,418	1/1:4,14:18:41.97:362,42,0	1/1:5,26:32:67.98:579,68,0	1/1:0,18:18:53.97:465,54,0
chr10	85670627	.	AAAG	A	259.94	PASS	AB=0.980;AC=19;AF=0.339;AN=56;BaseQRankSum=7.507;DP=470;FS=29.789;HRun=0;HaplotypeScore=87.2131;InbreedingCoeff=-0.2998;MQ=70.27;MQ0=7;MQRankSum=-2.817;QD=0.93;ReadPosRankSum=7.309;VQSLOD=-0.2039;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:14.26:14,0,135	0/1:6,0:6:11.20:26,0,11	0/0:54,0:20:34.18:0,34,395	0/1:29,0:14:10.53:11,0,56	0/0:25,0:24:53.30:0,53,478	0/0:19,0:19:38.85:0,39,580	0/1:15,0:15:16.04:16,0,90	0/1:12,0:12:19.85:20,0,85	0/0:10,0:10:12.45:0,12,156	0/1:9,1:10:11.31:11,0,102	0/1:13,1:14:35.79:36,0,82	0/1:9,0:9:23.24:23,0,43	0/1:14,1:15:31.83:80,0,32	0/0:12,0:12:3.80:0,4,90	1/1:18,1:18:10.01:96,10,0	0/1:14,1:15:0.85:1,0,110	0/1:26,0:26:38.43:38,0,108	0/1:17,0:16:3.15:3,0,72	0/1:6,0:6:9.11:9,0,52	0/1:9,0:9:6.01:6,0,58	0/0:12,0:12:7.66:0,8,152	0/0:8,0:7:8.98:0,9,122	0/0:13,0:13:32.64:0,33,288	0/0:18,0:18:30.44:0,30,382	0/0:18,0:16:35.88:0,36,480	0/1:17,1:17:12.45:12,0,212	0/1:19,0:18:5.95:6,0,171	0/1:14,0:12:3.14:3,0,137
chr10	85673558	.	CAAAA	C	2798.41	PASS	AB=0.604;AC=23;AF=0.411;AN=56;BaseQRankSum=5.969;DP=567;FS=0.422;HRun=15;HaplotypeScore=132.8681;InbreedingCoeff=0.6643;MQ=62.51;MQ0=22;MQRankSum=-8.010;QD=11.47;ReadPosRankSum=4.241;VQSLOD=0.2348;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,3:25:8.21:130,0,8	0/1:4,1:9:9.19:71,0,9	0/0:54,0:15:20.39:0,20,183	0/0:55,0:21:23.26:0,23,379	0/0:18,0:23:61.66:0,62,1108	0/0:16,0:20:42.14:0,42,846	1/1:7,11:19:35.94:456,36,0	0/0:13,0:26:40.07:0,40,291	0/0:23,0:25:54.18:0,54,1146	0/1:4,1:21:24.53:52,0,25	1/1:2,0:9:8.71:23,9,0	1/1:4,9:12:20.99:286,21,0	1/1:1,5:6:9.02:123,9,0	1/1:5,8:13:20.96:286,21,0	1/1:7,12:20:38.94:513,39,0	1/1:4,15:20:48.10:636,48,0	1/1:6,0:23:21.37:55,21,0	1/1:4,11:15:27:368,27,0	0/1:12,1:20:1.89:2,0,207	0/0:6,0:14:17.30:0,17,116	0/0:2,0:11:21.96:0,22,139	0/0:9,0:11:20.99:0,21,401	0/0:13,0:16:42.14:0,42,864	0/0:17,0:19:36.12:0,36,684	0/0:15,0:16:33.11:0,33,700	0/0:4,0:13:24.42:0,24,171	0/1:7,1:17:5.63:6,0,170	0/0:8,0:10:11.87:0,12,123
chr10	85673746	.	A	ATTTG	27334.91	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-11.520;DP=532;FS=5.912;HRun=0;HaplotypeScore=78.7991;InbreedingCoeff=0.9904;MQ=62.55;MQ0=0;MQRankSum=-7.324;QD=69.55;ReadPosRankSum=0.825;VQSLOD=7.1281;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:40:99:2869,108,0	1/1:0,3:3:9.03:252,9,0	0/0:17,0:16:48.16:0,48,914	0/0:15,0:15:27.81:0,28,682	0/0:15,0:15:42.13:0,42,786	0/0:18,0:18:51.16:0,51,983	1/1:5,24:30:68.57:1707,69,0	1/1:6,10:22:63.19:1445,63,0	0/0:15,0:15:45.15:0,45,899	1/1:2,20:24:69.22:1808,69,0	1/1:1,17:18:48.31:1339,48,0	1/1:0,11:11:30.10:839,30,0	1/1:3,11:14:38.96:1007,39,0	1/1:2,17:20:57.20:1514,57,0	1/1:2,17:20:57.20:1543,57,0	1/1:1,17:17:48.16:1297,48,0	1/1:4,43:48:99:3012,111,0	1/1:4,11:15:39.13:1016,39,0	1/1:1,15:18:54.19:1432,54,0	1/1:3,23:26:72.16:1738,72,0	1/1:3,14:18:44.98:996,45,0	0/0:12,0:12:33.11:0,33,659	0/0:11,0:11:33.11:0,33,659	0/0:21,0:21:57.18:0,57,1103	0/0:15,0:15:42.14:0,42,819	1/1:2,13:15:42.14:1174,42,0	1/1:3,18:23:63.22:1656,63,0	1/1:0,9:9:27.05:691,27,0
chr10	85673825	.	C	CTT	2657.19	PASS	AB=0.869;AC=27;AF=0.482;AN=56;BaseQRankSum=6.317;DP=511;FS=1.001;HRun=15;HaplotypeScore=102.2054;InbreedingCoeff=0.6397;MQ=66.86;MQ0=15;MQRankSum=-6.044;QD=9.19;ReadPosRankSum=-5.291;VQSLOD=0.4448;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:31:26.66:0,27,224	0/0:7,0:8:11.90:0,12,134	1/1:25,0:15:7.35:33,7,0	0/1:23,0:14:8.89:12,0,9	0/0:12,0:12:14.69:0,15,116	0/0:18,0:20:29.04:0,29,213	1/1:14,0:17:35.39:326,35,0	1/1:15,1:21:19.97:176,20,0	0/0:17,0:18:28.37:0,28,209	0/0:17,0:20:14.63:0,15,181	0/0:17,0:19:16.68:0,17,182	1/1:15,0:16:34.54:281,35,0	1/1:16,0:15:25.16:192,25,0	1/1:16,0:16:25:192,25,0	0/1:12,2:19:0.57:89,0,1	1/1:17,1:23:0.77:143,1,0	0/0:35,0:35:46.74:0,47,381	1/1:9,5:14:26.42:285,26,0	1/1:16,3:19:26.52:272,27,0	0/1:10,2:13:2.86:141,0,3	1/1:11,1:10:11.01:65,11,0	0/0:15,0:16:29.46:0,29,224	0/0:10,0:11:11.25:0,11,80	0/0:16,0:15:8.31:0,8,85	0/0:9,0:8:11.78:0,12,95	0/1:12,3:15:29.17:106,0,29	1/1:12,8:23:45.98:472,46,0	0/1:6,0:6:9.26:75,0,9
chr10	85674246	.	GGTGTGTGT	G	1337.07	PASS	AB=1.000;AC=15;AF=0.300;AN=50;BaseQRankSum=3.131;DP=538;FS=2.841;HRun=0;HaplotypeScore=151.7091;InbreedingCoeff=0.6392;MQ=70.98;MQ0=23;MQRankSum=-3.097;QD=8.74;ReadPosRankSum=2.059;VQSLOD=2.7917;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,14:33:17.98:288,18,0	1/1:4,2:6:3.01:74,3,0	./.	./.	0/0:12,0:12:11.99:0,12,274	0/0:10,0:10:12.04:0,12,343	0/0:17,0:17:8.98:0,9,147	0/0:29,0:27:15.58:0,16,90	0/0:16,0:14:12.04:0,12,472	1/1:5,9:14:11.54:151,12,0	./.	0/0:23,0:23:6.02:0,6,175	0/0:18,0:18:25.96:0,26,536	0/0:25,0:25:17.69:0,18,337	1/1:12,9:21:24.08:564,24,0	1/1:13,4:18:6.02:130,6,0	1/1:20,6:26:5.34:147,5,0	1/1:19,1:21:8.08:133,8,0	0/0:17,0:15:8.24:0,8,181	0/0:14,0:13:5.96:0,6,45	0/0:34,0:31:1.59:0,2,6	0/0:8,0:8:3.01:0,3,49	0/0:10,0:10:15.05:0,15,401	0/0:26,0:27:28.07:0,28,771	0/0:8,0:7:3.01:0,3,65	0/0:28,0:26:17.54:0,18,543	0/1:13,0:12:15.81:16,0,106	0/0:6,0:6:11.07:0,11,215
chr10	85674276	.	T	TGC	484.43	PASS	AB=0.946;AC=7;AF=0.125;AN=56;BaseQRankSum=5.180;DP=636;FS=1.121;HRun=0;HaplotypeScore=130.2869;InbreedingCoeff=-0.1557;MQ=45.54;MQ0=37;MQRankSum=0.952;QD=2.92;ReadPosRankSum=2.840;VQSLOD=2.6216;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:56.02:0,56,393	0/0:5,0:5:11.62:0,12,71	0/0:25,0:1:2.98:0,3,21	0/0:40,0:9:20.67:0,21,170	0/0:20,0:20:38.95:0,39,356	0/0:15,0:14:28.81:0,29,270	0/0:29,0:29:6.43:0,6,94	0/1:23,0:20:5.93:6,0,263	0/0:26,0:21:44.98:0,45,449	0/0:25,0:23:51.04:0,51,408	0/0:6,0:6:5.66:0,6,49	0/0:26,0:26:3.97:0,4,50	0/0:24,0:24:7.62:0,8,135	0/0:25,0:25:10.14:0,10,146	0/0:25,0:25:59.43:0,59,431	0/0:16,0:16:29.55:0,30,207	0/0:27,0:26:38.91:0,39,324	0/0:23,0:22:44.89:0,45,318	0/1:11,0:10:8.99:9,0,72	0/1:17,0:16:16.42:63,0,16	0/1:46,0:40:67.95:123,0,68	0/0:19,0:18:29.73:0,30,230	0/0:11,0:11:11.32:0,11,195	0/0:31,0:29:53.63:0,54,540	0/0:17,0:14:20.58:0,21,169	0/1:39,0:36:99:234,0,236	0/1:20,0:19:78.48:124,0,78	0/1:4,5:10:16.25:49,0,16
chr10	85674278	.	T	TGC	313.29	PASS	AB=0.721;AC=5;AF=0.089;AN=56;BaseQRankSum=3.621;DP=647;FS=3.053;HRun=0;HaplotypeScore=137.7159;InbreedingCoeff=-0.1174;MQ=45.54;MQ0=37;MQRankSum=-1.583;QD=2.59;ReadPosRankSum=5.100;VQSLOD=2.3518;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:56.25:0,56,403	0/0:5,0:5:11.64:0,12,72	0/0:28,0:2:2.99:0,3,23	0/0:40,0:8:14.67:0,15,128	0/0:21,0:21:42.39:0,42,377	0/0:15,0:14:28.81:0,29,270	0/1:14,19:33:67.25:106,0,67	0/0:24,0:21:39.48:0,39,268	0/0:25,0:20:44.99:0,45,452	0/0:24,0:22:51:0,51,389	0/0:5,0:5:5.67:0,6,48	0/1:10,17:27:38.15:38,0,40	0/1:16,10:27:60.64:139,0,61	0/1:11,12:24:57.08:111,0,57	0/0:27,0:27:62.30:0,62,439	0/0:16,0:16:32.66:0,33,231	0/0:27,0:26:35.90:0,36,288	0/0:22,0:21:47.84:0,48,333	0/0:11,0:10:17.30:0,17,96	0/0:17,0:16:3.28:0,3,42	0/0:46,0:40:20.87:0,21,196	0/0:19,0:18:29.82:0,30,231	0/0:10,0:10:23.84:0,24,222	0/0:30,0:28:56.62:0,57,566	0/0:17,0:14:26.58:0,27,224	0/0:39,0:36:94.98:0,95,545	0/0:21,0:20:43.84:0,44,249	0/1:10,0:10:23.85:36,0,24
chr10	85674280	.	T	TGC	1106.95	PASS	AB=0.974;AC=13;AF=0.232;AN=56;BaseQRankSum=3.965;DP=653;FS=0.474;HRun=0;HaplotypeScore=132.0184;InbreedingCoeff=0.1041;MQ=45.68;MQ0=34;MQRankSum=0.017;QD=3.90;ReadPosRankSum=1.766;VQSLOD=2.9036;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:57.52:0,58,358	0/0:5,0:5:11.40:0,11,57	0/0:32,0:2:2.98:0,3,21	0/0:39,0:7:7.19:0,7,91	0/0:22,0:22:45.37:0,45,403	0/0:15,0:14:28.81:0,29,270	0/1:32,0:32:16.70:17,0,47	0/1:25,0:22:89.99:90,0,161	0/0:25,0:20:44.99:0,45,450	0/0:24,0:22:49.32:0,49,295	0/0:5,0:5:5.54:0,6,37	0/1:23,2:25:4.49:47,0,4	1/1:19,6:25:20.84:270,21,0	0/1:21,5:26:19.96:147,0,20	0/0:27,0:27:62.84:0,63,362	0/0:17,0:17:31.34:0,31,179	0/0:26,0:25:34.49:0,34,224	0/0:22,0:21:46.82:0,47,270	0/1:14,0:13:17.72:18,0,45	1/1:17,0:16:5.68:74,6,0	0/1:46,0:40:58.02:162,0,58	0/0:18,0:18:29.90:0,30,243	0/0:10,0:10:23.68:0,24,218	0/0:31,0:29:53.62:0,54,541	0/0:13,0:11:20.57:0,21,168	0/1:40,0:37:99:253,0,236	0/1:23,0:22:75.75:132,0,76	0/1:11,0:11:4.48:56,0,4
chr10	85674282	.	T	TGC	1729.19	PASS	AB=0.967;AC=18;AF=0.321;AN=56;BaseQRankSum=2.015;DP=653;FS=25.855;HRun=0;HaplotypeScore=129.9458;InbreedingCoeff=0.3081;MQ=45.80;MQ0=35;MQRankSum=2.051;QD=5.96;ReadPosRankSum=0.094;VQSLOD=1.4676;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:40:48.13:220,0,48	1/1:5,0:5:7.44:55,7,0	0/0:34,0:3:2.99:0,3,24	0/0:41,0:6:11.50:0,12,96	0/0:22,0:22:48.38:0,48,426	0/0:16,0:15:28.81:0,29,271	1/1:34,0:34:21.45:244,21,0	0/0:24,0:21:43.22:0,43,266	0/0:24,0:19:44.99:0,45,451	0/1:24,0:22:1.10:191,0,1	1/1:5,0:5:5.20:29,5,0	0/1:23,2:25:19.06:39,0,19	0/1:20,6:26:11.08:186,0,11	1/1:20,5:25:16.18:195,16,0	0/1:28,0:28:33.18:242,0,33	1/1:17,0:17:24.71:182,25,0	0/1:26,0:25:14.32:140,0,14	0/1:23,0:22:58.27:156,0,58	0/0:11,0:10:17.95:0,18,113	0/0:16,0:15:2.08:0,2,27	0/0:44,0:38:28.42:0,28,249	0/0:16,0:16:29.92:0,30,244	0/0:9,0:9:20.97:0,21,203	0/0:30,0:28:52.74:0,53,544	0/0:13,0:11:20.58:0,21,169	0/0:40,0:37:99:0,101,597	0/0:23,0:22:40.27:0,40,281	0/1:11,0:11:31.84:32,0,35
chr10	85674816	.	T	TGCAC	5499.25	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=2.497;DP=483;FS=1.387;HRun=0;HaplotypeScore=233.8573;InbreedingCoeff=0.3272;MQ=46.45;MQ0=3;MQRankSum=-3.200;QD=12.91;ReadPosRankSum=-0.286;VQSLOD=3.8938;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:2.99:23,3,0	1/1:7,0:6:3:29,3,0	0/0:9,0:3:9:0,9,85	0/1:21,0:13:21.65:22,0,249	1/1:16,0:16:2.74:18,3,0	0/1:19,0:18:34.24:45,0,34	1/1:25,0:24:17.91:172,18,0	1/1:14,0:14:26.39:309,26,0	0/0:21,0:21:7.72:0,8,49	1/1:15,0:15:31.62:222,32,0	0/1:3,0:3:0:0,0,0	1/1:23,0:23:36.08:600,36,0	1/1:15,0:15:20.90:361,21,0	1/1:15,0:16:18.01:275,18,0	1/1:17,0:17:14.93:216,15,0	1/1:23,1:24:29.96:501,30,0	1/1:17,0:17:17.69:143,18,0	0/1:23,0:23:99:303,0,200	1/1:21,6:27:55.94:660,56,0	1/1:14,4:19:15.51:238,16,0	1/1:20,2:22:5.99:50,6,0	0/1:22,0:22:7.15:7,0,47	0/0:9,0:9:3:0,3,25	0/1:22,0:22:9:9,0,31	0/0:18,0:18:5.45:0,5,50	1/1:10,7:17:39.91:547,40,0	1/1:15,7:22:47.85:677,48,0	1/1:3,0:3:6.02:72,6,0
chr10	85674821	.	G	GCACGCACA	9136.44	PASS	AB=0.972;AC=43;AF=0.796;AN=54;BaseQRankSum=2.358;DP=594;FS=1.325;HRun=0;HaplotypeScore=314.8430;InbreedingCoeff=0.0923;MQ=42.88;MQ0=6;MQRankSum=-2.786;QD=16.20;ReadPosRankSum=2.388;VQSLOD=3.1080;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:25:5.94:42,6,0	1/1:12,0:11:15.05:324,15,0	0/0:14,0:5:9.01:0,9,110	0/1:22,0:11:82.85:83,0,395	1/1:15,0:15:2.03:7,2,0	0/1:27,0:24:29.75:65,0,30	1/1:27,0:27:25.90:367,26,0	1/1:17,0:16:19.03:229,19,0	0/1:25,0:25:41.44:88,0,41	1/1:21,0:18:43.55:368,44,0	./.	1/1:25,4:29:51.06:1409,51,0	1/1:10,6:18:26.84:745,27,0	1/1:27,2:29:24.51:636,25,0	1/1:19,1:23:18.01:535,18,0	1/1:24,3:28:32.74:919,33,0	1/1:22,0:23:22.93:296,23,0	0/1:22,0:27:99:800,0,167	1/1:30,0:30:42.79:670,43,0	1/1:18,0:18:14.54:196,15,0	1/1:26,0:26:5.99:50,6,0	0/1:22,0:22:31.46:31,0,53	0/0:10,0:10:2.99:0,3,25	0/1:22,0:22:4.27:63,0,4	0/1:21,0:20:47.34:78,0,47	1/1:19,0:19:14.58:430,15,0	1/1:25,0:24:49.50:620,50,0	1/1:4,0:4:6.02:85,6,0
chr10	85674823	.	A	ACG	2893.49	PASS	AB=0.976;AC=29;AF=0.558;AN=52;BaseQRankSum=2.898;DP=580;FS=14.872;HRun=0;HaplotypeScore=263.1640;InbreedingCoeff=0.3971;MQ=41.14;MQ0=7;MQRankSum=-2.156;QD=7.20;ReadPosRankSum=5.001;VQSLOD=1.9249;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:25:7.44:17,0,7	./.	0/0:16,0:5:11.99:0,12,101	0/0:22,0:10:17.61:0,18,198	1/1:15,0:15:0.47:1,0,0	0/1:26,0:23:5.68:6,0,73	1/1:27,0:26:7.72:133,8,0	0/1:16,1:16:30.50:111,0,31	0/0:23,0:23:22.60:0,23,145	0/1:20,0:17:14.77:159,0,15	./.	1/1:30,1:29:20.49:370,20,0	1/1:12,1:13:20.06:249,20,0	1/1:30,0:29:17.72:168,18,0	1/1:23,0:23:5.01:120,5,0	1/1:30,0:28:29.94:300,30,0	1/1:23,0:23:16.99:120,17,0	0/0:27,0:27:12.47:0,12,268	0/1:28,2:30:37.49:424,0,37	1/1:15,3:18:17.25:169,17,0	1/1:26,0:26:5.99:50,6,0	0/0:23,0:22:14.48:0,14,114	0/0:8,0:8:3:0,3,25	0/0:20,0:20:16.02:0,16,130	0/0:21,0:20:20.35:0,20,151	0/1:18,1:19:0.45:305,0,0	1/1:21,3:23:2.36:360,2,0	0/1:4,0:4:7.83:8,0,9
chr10	85674830	.	CATTTTTTT	C	8132.77	PASS	AB=0.911;AC=47;AF=0.839;AN=56;BaseQRankSum=-1.445;DP=529;FS=5.155;HRun=0;HaplotypeScore=247.6377;InbreedingCoeff=0.2518;MQ=38.17;MQ0=7;MQRankSum=-2.362;QD=16.67;ReadPosRankSum=2.132;VQSLOD=3.3480;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,3:21:3.48:71,3,0	1/1:9,2:10:0.47:1,0,0	0/0:16,1:4:8.89:0,9,118	0/1:19,2:9:99:124,0,366	1/1:10,4:14:2.89:24,3,0	1/1:23,1:21:13.68:120,14,0	1/1:18,4:21:9.48:176,9,0	1/1:10,3:12:24.08:530,24,0	1/1:13,10:23:17.14:329,17,0	1/1:18,0:15:36.11:743,36,0	1/1:4,0:4:0.47:1,0,0	1/1:28,0:26:31.84:292,32,0	1/1:11,0:11:22.19:325,22,0	1/1:25,4:28:12.97:137,13,0	0/1:20,2:22:27:108,0,27	1/1:25,3:26:20.44:137,20,0	1/1:16,1:17:9.89:193,10,0	1/1:19,4:23:57.19:1183,57,0	1/1:24,5:29:69.15:1373,69,0	1/1:13,3:16:17.13:296,17,0	0/0:8,16:24:0:0,0,0	0/1:23,0:22:7.29:51,0,7	0/1:5,2:7:0:0,0,0	0/1:17,1:18:18.53:19,0,19	1/1:17,2:18:9.55:65,10,0	1/1:17,1:18:51.17:869,51,0	1/1:21,3:23:54.38:916,54,0	1/1:3,1:4:5.51:52,6,0
chr10	85674831	.	ATTTTTT	A	8517.62	PASS	AB=0.682;AC=49;AF=0.875;AN=56;BaseQRankSum=-0.664;DP=485;FS=4.624;HRun=7;HaplotypeScore=220.0976;InbreedingCoeff=0.3717;MQ=38.52;MQ0=7;MQRankSum=-3.186;QD=18.20;ReadPosRankSum=4.141;VQSLOD=0.4027;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:20:3.48:71,3,0	0/1:2,8:9:0:0,0,0	0/0:17,0:4:8.81:0,9,90	0/1:20,0:9:98.92:99,0,277	1/1:9,3:14:2.82:33,3,0	1/1:6,16:21:14.70:124,15,0	1/1:5,14:18:9.50:173,10,0	1/1:3,9:11:24.08:500,24,0	1/1:17,2:20:27.62:344,28,0	1/1:0,15:12:33.11:774,33,0	0/1:0,3:3:0:0,0,0	1/1:8,18:25:29.99:348,30,0	1/1:7,4:11:23.80:335,24,0	1/1:8,20:27:15.28:157,15,0	0/1:6,13:19:20.79:135,0,21	1/1:11,15:24:21.01:195,21,0	1/1:2,11:14:9.86:164,10,0	1/1:10,11:21:57.19:1151,57,0	1/1:6,17:23:66.21:1373,66,0	1/1:3,12:15:17.56:289,18,0	0/1:16,5:21:0:0,0,0	1/1:10,9:20:9.50:89,9,0	1/1:4,2:7:0.47:1,0,0	1/1:8,5:16:9.62:57,10,0	1/1:10,7:17:16.45:110,16,0	1/1:1,16:17:51.17:990,51,0	1/1:4,16:21:51.61:919,52,0	1/1:2,2:4:5.95:89,6,0
chr10	85674953	.	T	TC	18813.39	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-11.435;DP=705;FS=20.216;HRun=2;HaplotypeScore=69.1380;InbreedingCoeff=0.9989;MQ=84.09;MQ0=0;MQRankSum=-5.096;QD=37.25;ReadPosRankSum=2.801;VQSLOD=3.0373;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:31:66.22:950,66,0	1/1:1,8:9:21.07:302,21,0	0/0:25,0:25:66.14:0,66,759	0/0:22,0:22:62.98:0,63,747	0/0:14,0:14:33.10:0,33,407	0/0:29,0:29:72.22:0,72,892	1/1:1,28:29:84.24:1186,84,0	1/1:2,13:15:39.13:560,39,0	0/0:15,0:15:39.11:0,39,470	1/1:1,19:20:54.11:713,54,0	1/1:0,9:9:24.08:345,24,0	1/1:2,40:42:99:1597,111,0	1/1:1,20:21:57.15:797,57,0	1/1:0,28:28:81.27:1165,81,0	1/1:2,34:36:96.32:1382,96,0	1/1:1,43:44:99:1726,120,0	1/1:2,43:45:99:1598,111,0	1/1:4,26:30:75.25:1080,75,0	1/1:2,16:18:48.16:691,48,0	1/1:0,15:15:36.12:518,36,0	1/1:4,44:48:99:1685,117,0	0/0:14,0:14:36.11:0,36,444	0/0:20,0:20:57.18:0,57,707	0/0:40,0:40:99:0,105,1288	0/0:21,0:21:57.18:0,57,706	1/1:2,18:20:54.12:707,54,0	1/1:1,24:25:69.23:992,69,0	1/1:0,19:19:57.19:821,57,0
chr10	85678951	.	T	TTCTCTC	624.40	PASS	AB=0.992;AC=20;AF=0.370;AN=54;BaseQRankSum=6.327;DP=574;FS=0.748;HRun=0;HaplotypeScore=192.4608;InbreedingCoeff=0.1231;MQ=60.20;MQ0=12;MQRankSum=-6.085;QD=1.86;ReadPosRankSum=-5.821;VQSLOD=0.9508;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:27:1.95:2,0,25	1/1:7,0:7:2.99:26,3,0	./.	0/1:33,0:15:0.17:0,0,0	0/0:16,0:17:6.01:0,6,68	0/0:24,0:23:6.15:0,6,73	0/1:26,0:29:57.83:58,0,66	0/0:33,0:32:5.24:0,5,49	0/0:19,0:23:26.98:0,27,427	0/1:22,0:21:19.79:45,0,20	0/1:17,0:16:14.15:14,0,62	0/1:24,0:23:0.06:80,0,0	0/1:21,0:21:25.36:112,0,25	0/1:31,0:30:7.91:93,0,8	0/0:16,0:17:21.07:0,21,385	0/0:16,0:16:16.63:0,17,199	1/1:17,0:17:5.53:67,6,0	1/1:3,5:10:6:120,6,0	0/0:18,0:17:15.04:0,15,163	0/0:11,0:11:2:0,2,46	0/1:21,0:20:0.01:0,0,0	0/0:16,0:16:3.01:0,3,40	0/0:13,0:13:14.48:0,14,135	0/0:30,0:31:42.14:0,42,748	0/1:17,0:17:0:0,0,0	0/1:25,0:25:33.21:33,0,41	0/1:18,0:16:31.39:31,0,149	1/1:11,0:11:10.12:90,10,0
chr10	85678975	.	CT	C	677.83	PASS	AB=0.859;AC=8;AF=0.143;AN=56;BaseQRankSum=8.949;DP=758;FS=4.272;HRun=1;HaplotypeScore=166.8130;InbreedingCoeff=-0.1791;MQ=40.24;MQ0=42;MQRankSum=-7.818;QD=3.42;ReadPosRankSum=-0.292;VQSLOD=-0.0299;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,1:33:14.30:0,14,458	0/1:6,0:6:20.28:20,0,117	0/0:59,0:2:6.02:0,6,75	0/0:75,0:7:12.02:0,12,137	0/0:19,0:19:42.14:0,42,552	0/0:24,0:21:42.93:0,43,527	0/1:30,3:33:81.07:81,0,324	0/0:42,0:37:90.99:0,91,1048	0/0:25,0:25:63.65:0,64,802	0/0:29,2:30:41.96:0,42,851	0/0:19,2:20:15.87:0,16,200	0/1:34,3:34:66.05:66,0,309	0/1:19,2:21:60.42:60,0,247	0/1:35,4:38:51.66:52,0,319	0/0:22,0:22:58.73:0,59,796	0/0:17,0:17:49.21:0,49,609	0/0:25,1:26:10.06:0,10,526	0/0:15,0:14:21.06:0,21,267	0/1:10,9:17:99:265,0,224	0/1:10,5:14:56.57:57,0,163	0/0:18,3:17:9.88:0,10,259	0/0:14,0:14:39.11:0,39,503	0/0:20,0:20:41.07:0,41,503	0/0:31,0:31:74.28:0,74,1049	0/0:15,0:15:27.09:0,27,342	0/0:30,0:29:83.97:0,84,1011	0/1:20,8:26:99:213,0,402	0/0:15,0:12:32.96:0,33,390
chr10	85679016	.	CCTCTCTCT	C	4512.41	PASS	AB=0.801;AC=13;AF=0.241;AN=54;BaseQRankSum=4.327;DP=796;FS=8.951;HRun=0;HaplotypeScore=223.2681;InbreedingCoeff=0.2093;MQ=41.16;MQ0=57;MQRankSum=-8.844;QD=17.09;ReadPosRankSum=1.049;VQSLOD=2.9619;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:30:26.98:0,27,234	0/0:7,0:7:12.03:0,12,224	0/0:89,0:13:14.99:0,15,267	0/0:129,0:21:34.92:0,35,780	0/0:12,0:12:24.08:0,24,914	0/0:13,0:13:30.09:0,30,1009	0/1:23,13:36:42.15:434,0,42	0/1:34,0:29:22.32:22,0,275	0/0:14,0:14:33.11:0,33,1085	0/0:18,0:26:60.06:0,60,899	0/0:13,0:19:14.91:0,15,113	0/1:21,11:29:13.06:606,0,13	1/1:13,10:23:1.28:586,1,0	1/1:17,16:33:11.39:774,11,0	0/0:18,0:22:48.16:0,48,1696	0/0:23,0:23:63.22:0,63,2339	0/0:12,0:36:35.90:0,36,290	0/0:10,0:10:24.04:0,24,861	0/1:15,1:16:62.19:62,0,343	0/1:14,2:16:12.94:191,0,13	1/1:16,0:15:8.83:87,9,0	0/0:12,0:12:27.09:0,27,1069	0/0:17,0:18:39.13:0,39,1485	0/0:33,0:33:72.25:0,72,2673	0/0:18,0:20:48.15:0,48,1746	0/1:14,0:28:99:569,0,109	0/1:14,14:27:66.50:1181,0,67	./.
chr10	85681004	.	GA	G	2136.35	PASS	AB=0.690;AC=21;AF=0.375;AN=56;BaseQRankSum=6.041;DP=607;FS=0.398;HRun=14;HaplotypeScore=72.6097;InbreedingCoeff=0.5986;MQ=59.17;MQ0=7;MQRankSum=0.375;QD=7.83;ReadPosRankSum=1.553;VQSLOD=2.8591;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:33:28.96:0,29,502	0/0:7,0:8:17.86:0,18,154	0/0:36,0:7:6:0,6,54	0/0:29,0:8:7.62:0,8,46	0/0:19,1:20:24.44:0,24,359	0/0:19,0:19:28.54:0,29,241	1/1:4,17:20:41.64:288,42,0	1/1:11,12:24:38.46:230,38,0	0/0:17,0:17:22.20:0,22,216	0/1:21,1:23:8.99:9,0,232	0/0:22,0:23:30.92:0,31,305	1/1:7,13:20:26.60:185,27,0	0/1:6,8:14:5.24:85,0,5	0/1:7,13:21:21.66:143,0,22	0/0:19,1:21:18.09:0,18,286	0/0:20,3:25:18.53:0,19,416	0/0:32,1:36:16.46:0,16,469	1/1:11,12:25:18.01:212,18,0	1/1:5,15:19:44.55:306,45,0	1/1:11,16:27:14.92:258,15,0	1/1:5,7:14:21.84:134,22,0	0/0:14,0:14:27.02:0,27,247	0/0:17,0:18:35.85:0,36,312	0/0:15,1:15:39.02:0,39,355	0/0:15,2:17:18.43:0,18,300	0/1:10,7:17:4.09:120,0,4	1/1:14,15:30:1.14:232,1,0	0/1:4,10:14:25.88:135,0,26
chr10	85681575	.	G	GA	306.05	PASS	AB=0.929;AC=3;AF=0.054;AN=56;BaseQRankSum=-3.466;DP=553;FS=5.349;HRun=9;HaplotypeScore=52.6488;InbreedingCoeff=0.5047;MQ=82.63;MQ0=0;MQRankSum=-0.773;QD=7.12;ReadPosRankSum=1.148;VQSLOD=0.7088;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:50.96:0,51,438	0/0:8,0:8:14.99:0,15,130	0/0:18,0:18:25.42:0,25,232	0/0:14,0:13:5:0,5,32	0/0:12,1:13:2.79:0,3,249	0/0:18,1:20:17.84:0,18,384	0/0:19,0:19:44.96:0,45,386	0/0:45,0:45:99:0,105,906	0/0:23,0:23:62.98:0,63,547	0/0:17,0:17:50.99:0,51,443	0/0:14,0:15:44.03:0,44,371	0/0:14,0:14:38.97:0,39,335	0/0:10,0:10:26.99:0,27,234	0/0:18,0:18:41.97:0,42,361	0/0:23,0:23:59.98:0,60,521	0/0:26,0:26:71.97:0,72,625	0/0:34,0:34:89.94:0,90,776	0/1:24,2:26:9.40:9,0,381	0/0:27,0:27:62.97:0,63,547	0/0:16,0:16:44.96:0,45,383	0/0:14,0:14:32.99:0,33,286	0/0:16,0:16:41.99:0,42,364	1/1:2,15:17:36.10:398,36,0	0/0:21,0:21:53.94:0,54,460	0/0:23,0:22:62.97:0,63,543	0/0:21,0:21:59.94:0,60,510	0/0:24,0:24:65.98:0,66,573	0/0:12,0:12:6.41:0,6,165
chr10	85681778	.	GC	G	492.64	PASS	AB=0.960;AC=33;AF=0.611;AN=54;BaseQRankSum=2.104;DP=157;FS=0.000;HRun=1;HaplotypeScore=28.3337;InbreedingCoeff=0.3674;MQ=88.07;MQ0=0;MQRankSum=-1.997;QD=3.91;ReadPosRankSum=-0.465;VQSLOD=-0.1094;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,1:15:25.42:160,25,0	./.	0/1:18,0:11:18.72:19,0,110	0/1:9,3:11:18.08:36,0,18	0/0:6,0:6:7.21:0,7,48	0/0:6,0:6:7.32:0,7,46	1/1:3,0:3:4.77:31,5,0	1/1:10,0:10:7.61:27,8,0	0/0:6,0:6:11.99:0,12,123	1/1:2,0:2:3.47:29,3,0	1/1:4,0:4:5.85:36,6,0	1/1:5,0:5:1.45:49,1,0	1/1:5,0:5:5.34:49,5,0	1/1:5,0:5:11.25:54,11,0	0/1:6,0:6:13.81:14,0,81	0/0:3,0:3:6.01:0,6,59	1/1:8,1:9:15.64:104,16,0	1/1:2,0:2:0.47:1,0,0	1/1:3,0:3:2.50:5,2,0	0/1:6,0:6:0.07:0,0,8	1/1:14,0:14:4.31:15,4,0	0/0:2,0:2:4.24:0,4,28	0/0:2,0:2:6:0,6,58	0/0:5,0:5:11.92:0,12,86	0/0:1,0:1:0:0,0,0	1/1:2,0:2:2.88:15,3,0	0/1:4,0:4:0.32:1,0,0	1/1:1,0:1:0.47:1,0,0
chr10	85681784	.	G	GT	456.80	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=-1.026;DP=137;FS=9.617;HRun=0;HaplotypeScore=25.4471;InbreedingCoeff=0.5762;MQ=84.03;MQ0=0;MQRankSum=1.237;QD=12.69;ReadPosRankSum=1.537;VQSLOD=3.3090;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:32.17:0,32,215	0/0:1,0:1:0:0,0,0	0/0:15,0:8:7.03:0,7,93	0/0:11,0:10:20.19:0,20,163	./.	0/0:4,0:4:3.89:0,4,34	0/0:2,0:2:5.96:0,6,48	1/1:5,4:9:3.03:135,3,0	0/0:5,0:5:9.03:0,9,125	0/0:1,0:1:2.37:0,2,8	0/0:4,0:4:8.50:0,9,64	0/0:4,0:4:11.97:0,12,120	0/0:4,0:4:9.03:0,9,118	0/0:6,0:6:14.96:0,15,146	0/0:8,0:8:22.81:0,23,213	0/0:2,0:2:6.01:0,6,69	0/0:7,0:7:19.08:0,19,145	./.	1/1:1,3:4:8.96:86,9,0	1/1:1,5:6:11.97:140,12,0	1/1:2,10:13:9.02:121,9,0	0/0:1,0:1:0:0,0,0	0/0:2,0:2:6.01:0,6,67	0/0:2,0:2:2.99:0,3,24	0/0:1,0:1:2.98:0,3,21	0/0:1,0:1:2.96:0,3,19	1/1:0,3:3:6.02:80,6,0	1/1:0,1:1:3.01:41,3,0
chr10	85682218	.	C	CT	2394.26	PASS	AB=0.975;AC=12;AF=0.214;AN=56;BaseQRankSum=-7.138;DP=437;FS=23.983;HRun=7;HaplotypeScore=43.7414;InbreedingCoeff=0.7528;MQ=73.17;MQ0=4;MQRankSum=1.044;QD=18.56;ReadPosRankSum=1.202;VQSLOD=1.9488;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:30:54.16:645,54,0	1/1:0,3:3:9.03:109,9,0	0/1:18,0:14:22.52:23,0,40	0/1:14,0:9:5.79:6,0,23	0/0:11,0:11:27:0,27,249	0/0:23,0:22:66.08:0,66,629	0/0:16,0:16:38.98:0,39,361	0/0:37,0:37:92.95:0,93,871	0/0:10,0:10:21:0,21,191	1/1:6,13:19:39.12:471,39,0	1/1:0,11:11:33.02:379,33,0	0/0:8,0:8:18.03:0,18,174	0/0:2,0:2:6.01:0,6,58	0/0:6,0:6:15.02:0,15,145	0/0:13,0:13:33.04:0,33,315	0/0:24,0:24:72.05:0,72,676	1/1:2,31:33:78.24:938,78,0	0/0:29,0:29:75.10:0,75,719	0/0:17,0:17:42.05:0,42,400	0/0:9,0:9:21:0,21,190	0/0:14,0:14:30.03:0,30,285	0/0:4,0:4:9.01:0,9,83	0/0:9,0:9:24.04:0,24,231	0/0:10,0:10:27.01:0,27,248	0/0:13,0:13:26.11:0,26,255	0/0:17,1:18:11.82:0,12,391	0/0:26,0:26:69.04:0,69,635	0/0:9,0:9:21.03:0,21,203
chr10	85682840	.	TGGAA	T	1823.16	PASS	AC=12;AF=0.240;AN=50;BaseQRankSum=4.284;DP=678;FS=4.795;HRun=0;HaplotypeScore=117.4323;InbreedingCoeff=0.9492;MQ=60.17;MQ0=4;MQRankSum=2.397;QD=14.13;ReadPosRankSum=1.565;VQSLOD=3.3073;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:37:33.11:0,33,587	0/0:6,0:13:19.13:0,19,281	./.	./.	0/0:13,0:13:15.05:0,15,314	0/0:17,0:17:21.07:0,21,468	0/0:25,0:26:26.99:0,27,309	./.	0/0:36,0:36:63.22:0,63,1430	0/0:20,0:25:27.09:0,27,539	0/0:11,0:15:12:0,12,159	0/0:28,0:38:39.04:0,39,581	0/0:26,0:36:42.12:0,42,665	0/0:29,0:41:26.99:0,27,381	0/0:32,1:33:7.98:0,8,1066	0/0:27,0:27:48.16:0,48,1078	0/0:29,0:38:27.06:0,27,424	0/0:20,0:25:24:0,24,323	1/1:13,3:15:9.03:139,9,0	1/1:4,4:9:15.04:204,15,0	1/1:21,17:37:29.38:461,29,0	0/0:17,0:17:21.07:0,21,477	0/0:14,0:14:18.06:0,18,399	0/0:50,1:51:26.03:0,26,1519	0/0:17,0:17:21.07:0,21,467	1/1:8,12:20:33.11:501,33,0	1/1:14,19:35:33.06:464,33,0	1/1:5,6:11:15.05:231,15,0
chr10	85684897	.	GCACACA	G	3686.16	PASS	AB=0.724;AC=18;AF=0.346;AN=52;BaseQRankSum=8.388;DP=739;FS=3.710;HRun=0;HaplotypeScore=160.6072;InbreedingCoeff=0.7675;MQ=65.33;MQ0=12;MQRankSum=-5.947;QD=13.50;ReadPosRankSum=-1.473;VQSLOD=2.9379;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:36:15.94:211,16,0	1/1:3,0:9:6.49:84,6,0	0/0:35,0:19:12.02:0,12,231	0/0:37,0:20:24.07:0,24,487	0/0:13,0:13:24.08:0,24,708	0/0:12,0:13:23.33:0,23,643	0/0:19,0:32:35.33:0,35,768	1/1:17,17:34:49.67:732,50,0	0/0:34,0:37:84.27:0,84,2252	0/1:12,0:30:8.08:309,0,8	./.	0/0:16,0:36:48.16:0,48,1205	0/0:12,0:31:53.96:0,54,1174	0/0:10,0:32:39.13:0,39,1050	0/0:29,0:30:60.16:0,60,1565	0/0:25,0:28:48.62:0,49,1330	1/1:13,0:30:20.86:293,21,0	0/0:33,0:41:76.77:0,77,2151	1/1:4,4:8:11.06:237,11,0	./.	1/1:30,29:63:0.58:64,1,0	0/0:17,0:17:18.04:0,18,435	0/0:16,0:16:15.02:0,15,304	0/0:36,0:40:81.28:0,81,2325	0/0:12,0:14:24.08:0,24,602	1/1:4,22:27:65.96:1089,66,0	1/1:4,15:20:30.10:609,30,0	0/1:8,2:10:13.77:57,0,14
chr10	85685200	.	C	CTTTT	4213.86	PASS	AB=0.925;AC=26;AF=0.464;AN=56;BaseQRankSum=7.959;DP=590;FS=0.879;HRun=7;HaplotypeScore=120.4209;InbreedingCoeff=0.5434;MQ=61.72;MQ0=20;MQRankSum=-8.476;QD=12.18;ReadPosRankSum=3.207;VQSLOD=0.8253;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:20:19.88:248,20,0	1/1:11,0:11:8.94:119,9,0	0/0:33,0:9:10.31:0,10,93	0/0:47,0:22:23.33:0,23,327	0/0:21,0:21:41.63:0,42,652	0/0:19,0:18:51.17:0,51,808	1/1:23,0:22:21.07:341,21,0	0/1:37,0:37:76.24:279,0,76	0/0:13,0:13:19.37:0,19,192	0/1:20,0:19:17.48:209,0,17	1/1:14,0:14:12.24:150,12,0	0/1:8,10:17:59.87:101,0,60	1/1:17,0:15:13.14:188,13,0	0/1:26,0:26:10.39:332,0,10	0/0:16,0:16:34.60:0,35,436	0/0:18,0:17:43.67:0,44,637	1/1:22,1:21:29.75:344,30,0	0/0:18,0:18:31.97:0,32,452	1/1:40,0:40:24.07:518,24,0	0/1:15,0:16:63.08:140,0,63	0/1:8,0:8:8.50:21,0,9	0/0:7,0:7:8.74:0,9,128	0/0:18,0:18:38.38:0,38,567	0/0:17,0:17:34.44:0,34,484	0/0:15,0:15:32.42:0,32,432	1/1:28,0:28:19.84:430,20,0	1/1:28,1:29:9.28:540,9,0	1/1:12,0:11:17.64:253,18,0
chr10	85685202	.	T	TTTTC	7097.41	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=0.607;DP=586;FS=3.537;HRun=0;HaplotypeScore=106.9299;InbreedingCoeff=0.8979;MQ=61.42;MQ0=22;MQRankSum=-5.821;QD=20.69;ReadPosRankSum=1.901;VQSLOD=4.4947;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:19:26.05:386,26,0	1/1:11,0:11:11.96:175,12,0	0/0:32,0:9:10.80:0,11,60	0/0:48,0:22:21.49:0,21,251	0/0:20,0:20:48.80:0,49,657	0/0:19,0:18:51.12:0,51,713	1/1:1,18:21:21.07:465,21,0	1/1:37,0:37:31.29:517,31,0	0/0:11,0:11:23.86:0,24,288	1/1:20,0:19:33.04:480,33,0	1/1:14,0:14:23.71:285,24,0	1/1:17,1:17:11.94:180,12,0	1/1:18,1:17:12.11:274,12,0	1/1:24,3:26:30.24:478,30,0	0/0:16,0:16:38.99:0,39,447	0/0:18,0:17:45.02:0,45,534	1/1:23,0:20:29.13:473,29,0	0/0:20,0:18:37.82:0,38,412	1/1:37,2:39:93.61:1124,94,0	1/1:16,0:16:22.17:322,22,0	0/1:8,0:8:27.39:39,0,27	0/0:8,0:8:8.58:0,9,94	0/0:18,0:18:41.95:0,42,502	0/0:17,0:17:31.62:0,32,414	0/0:15,0:15:41.82:0,42,515	1/1:26,1:26:40.04:742,40,0	1/1:27,1:28:45.83:790,46,0	1/1:12,0:11:27:369,27,0
chr10	85685206	.	C	CTTTCT	8150.36	PASS	AB=0.778;AC=31;AF=0.554;AN=56;BaseQRankSum=-0.029;DP=580;FS=0.000;HRun=0;HaplotypeScore=116.7268;InbreedingCoeff=0.9078;MQ=57.12;MQ0=25;MQRankSum=-5.919;QD=23.83;ReadPosRankSum=1.279;VQSLOD=4.5883;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,3:20:28.80:482,29,0	1/1:10,0:10:11.96:230,12,0	0/0:31,0:7:9.37:0,9,52	0/0:42,0:19:21.42:0,21,267	0/0:18,0:20:51.28:0,51,751	0/0:14,0:19:50.99:0,51,781	1/1:21,0:20:21.07:361,21,0	1/1:35,1:36:42.89:707,43,0	0/0:11,0:12:24:0,24,335	1/1:19,0:18:33.05:577,33,0	1/1:14,0:14:23.71:318,24,0	1/1:18,0:17:11.94:158,12,0	1/1:10,0:16:25.20:233,25,0	1/1:24,1:25:24.82:364,25,0	0/0:13,0:14:38.28:0,38,450	0/0:18,0:17:44.86:0,45,563	1/1:23,0:20:29.13:604,29,0	0/0:17,0:17:42.61:0,43,471	1/1:34,1:39:95.39:1227,95,0	1/1:14,1:16:25.25:377,25,0	0/1:5,0:7:9.24:92,0,9	0/0:5,0:7:8.70:0,9,102	0/0:17,0:19:41.56:0,42,537	0/0:16,0:16:31.63:0,32,442	0/0:15,0:16:37.18:0,37,559	1/1:25,2:27:64.86:922,65,0	1/1:23,2:28:68.69:992,69,0	1/1:11,0:13:32.90:507,33,0
chr10	85685207	.	T	TTTC	5528.11	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=0.924;DP=589;FS=7.919;HRun=0;HaplotypeScore=109.5122;InbreedingCoeff=0.8021;MQ=55.61;MQ0=29;MQRankSum=-3.466;QD=15.70;ReadPosRankSum=3.920;VQSLOD=3.5535;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:21:28.72:303,29,0	1/1:10,0:10:11.95:139,12,0	0/0:30,0:6:10.49:0,10,57	0/0:44,0:19:21.05:0,21,229	0/0:20,0:20:51.61:0,52,650	0/0:20,0:19:54.06:0,54,672	1/1:22,0:20:21.07:321,21,0	1/1:35,0:34:10.28:410,10,0	0/0:12,0:12:24.01:0,24,294	1/1:20,0:18:32.86:385,33,0	1/1:15,0:14:23.71:232,24,0	0/1:18,0:17:3.48:118,0,3	0/1:20,0:18:0.88:218,0,1	1/1:13,8:25:18.35:403,18,0	0/0:16,0:15:38.95:0,39,442	0/0:17,0:16:44.99:0,45,537	1/1:24,0:21:29.12:354,29,0	0/0:19,0:17:44.04:0,44,454	1/1:39,0:39:40.46:854,40,0	1/1:16,0:16:21.16:292,21,0	0/1:7,0:7:20.51:71,0,21	0/0:7,0:7:8.37:0,8,91	0/0:18,0:18:44.86:0,45,496	0/0:17,0:17:34.72:0,35,427	0/0:17,0:16:44.93:0,45,553	1/1:29,0:28:33:609,33,0	1/1:28,0:28:18.53:552,19,0	1/1:18,0:16:9.10:268,9,0
chr10	85685209	.	T	TCTTTC	5372.12	PASS	AB=0.961;AC=23;AF=0.411;AN=56;BaseQRankSum=0.775;DP=592;FS=10.192;HRun=0;HaplotypeScore=126.8397;InbreedingCoeff=0.3166;MQ=54.43;MQ0=33;MQRankSum=-3.668;QD=15.22;ReadPosRankSum=5.631;VQSLOD=3.6297;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,12:21:28.80:574,29,0	1/1:1,10:12:11.98:286,12,0	0/0:28,0:4:11.06:0,11,88	0/0:43,0:18:27.30:0,27,342	0/0:19,0:19:54.15:0,54,1016	0/0:23,0:21:57.11:0,57,1066	1/1:22,0:20:20.92:199,21,0	0/1:32,0:33:99:239,0,128	0/0:12,0:12:27.06:0,27,488	1/1:5,13:21:35.82:816,36,0	1/1:1,11:15:23.97:434,24,0	0/1:15,0:14:13.88:55,0,14	0/1:19,0:18:33.27:33,0,75	0/1:23,0:22:21.39:152,0,21	0/0:16,0:15:42.07:0,42,666	0/0:18,0:17:51.12:0,51,901	1/1:5,16:21:29.13:749,29,0	0/0:19,0:16:42.87:0,43,700	0/1:37,0:37:67.63:482,0,68	0/1:14,0:15:57.94:157,0,58	0/1:6,0:7:47.07:47,0,61	0/0:7,0:7:8.79:0,9,153	0/0:18,0:18:45.09:0,45,763	0/0:18,0:17:37.50:0,38,698	0/0:18,0:17:44.95:0,45,765	0/1:28,0:29:33.46:428,0,33	1/1:28,0:28:12.25:454,12,0	0/1:21,0:19:31.85:266,0,32
chr10	85685234	.	T	TC	2206.98	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=4.758;DP=406;FS=3.423;HRun=1;HaplotypeScore=66.9875;InbreedingCoeff=0.9030;MQ=42.01;MQ0=38;MQRankSum=-4.799;QD=22.75;ReadPosRankSum=-0.007;VQSLOD=3.6203;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:17:36.08:0,36,423	0/0:9,0:9:18.04:0,18,206	0/0:3,0:1:2.92:0,3,17	0/0:11,0:2:0.89:0,1,2	0/0:18,0:18:44.89:0,45,450	0/0:20,0:16:39.09:0,39,465	0/0:20,0:16:35.95:0,36,401	1/1:5,16:19:44.79:524,45,0	0/0:11,0:11:21.07:0,21,265	0/0:15,0:14:30.09:0,30,378	0/0:13,0:12:23.99:0,24,270	0/0:12,0:12:18.02:0,18,192	0/0:15,0:15:27.55:0,28,334	0/0:18,0:17:33.04:0,33,371	0/0:13,0:12:24.06:0,24,285	0/0:15,0:15:39.08:0,39,485	0/0:19,0:16:17.98:0,18,197	0/0:21,0:17:29.30:0,29,435	1/1:2,11:13:30.03:384,30,0	1/1:0,7:7:20.95:249,21,0	1/1:2,5:5:6.02:86,6,0	0/0:8,0:6:9.03:0,9,116	0/0:15,0:13:24.03:0,24,278	0/0:13,0:12:27.06:0,27,320	0/0:16,0:14:30.09:0,30,373	1/1:1,9:10:29.88:380,30,0	1/1:8,14:20:26.82:346,27,0	1/1:4,11:14:30.10:428,30,0
chr10	85686814	.	G	GTT	3052.73	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.150;DP=619;FS=27.053;HRun=0;HaplotypeScore=102.6503;InbreedingCoeff=0.9746;MQ=88.11;MQ0=0;MQRankSum=-11.082;QD=51.74;ReadPosRankSum=0.669;VQSLOD=2.2868;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:69.24:1327,69,0	1/1:1,9:10:30.10:566,30,0	0/0:29,0:29:87.29:0,87,1352	0/0:25,0:25:72.25:0,72,1164	0/0:12,0:12:36.09:0,36,538	0/0:21,0:21:63.22:0,63,1025	0/0:28,0:28:84.29:0,84,1364	0/0:37,0:37:99:0,102,1610	0/0:28,0:28:81.25:0,81,1270	1/1:2,8:11:33.08:584,33,0	1/1:0,2:2:6.02:116,6,0	0/0:24,0:24:72.23:0,72,1146	0/0:25,0:25:75.26:0,75,1223	0/0:32,0:32:96.33:0,96,1541	0/0:44,0:44:99:0,126,2056	0/0:42,0:42:99:0,126,2003	1/1:0,13:13:26.39:629,26,0	0/0:18,0:18:54.18:0,54,881	0/0:22,0:22:66.20:0,66,1012	0/0:15,0:15:45.15:0,45,734	0/0:32,0:32:96.31:0,96,1538	0/0:17,0:17:51.17:0,51,832	0/0:15,0:15:45.15:0,45,734	0/0:22,0:22:66.23:0,66,1077	0/0:10,0:10:30.09:0,30,465	0/0:15,0:15:42.13:0,42,663	0/0:30,0:30:90.28:0,90,1413	0/0:17,0:17:51.15:0,51,806
chr10	85686822	.	C	CCTTT	6437.32	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.333;DP=639;FS=38.952;HRun=0;HaplotypeScore=134.2759;InbreedingCoeff=0.9961;MQ=85.83;MQ0=0;MQRankSum=-13.877;QD=72.33;ReadPosRankSum=-1.919;VQSLOD=2.5182;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,22:33:93.18:2381,93,0	1/1:4,8:12:36.08:855,36,0	0/0:28,0:28:78.25:0,78,1556	0/0:27,0:27:81.26:0,81,1587	0/0:11,0:11:33.09:0,33,634	0/0:19,0:19:57.17:0,57,1155	0/0:29,0:29:87.28:0,87,1770	0/0:38,0:38:99:0,111,2144	0/0:29,0:29:81.25:0,81,1617	1/1:8,8:15:45.04:1097,45,0	1/1:3,2:5:15.04:366,15,0	0/0:23,0:23:69.22:0,69,1406	0/0:26,0:26:78.27:0,78,1627	0/0:31,0:31:93.31:0,93,1912	0/0:45,0:45:99:0,129,2684	0/0:37,0:37:99:0,111,2280	1/1:12,11:23:66.22:1739,66,0	0/0:18,0:18:54.19:0,54,1131	0/0:23,0:23:63.18:0,63,1277	0/0:21,0:21:57.13:0,57,1072	0/0:29,0:29:87.30:0,87,1819	0/0:14,0:14:42.14:0,42,858	0/0:14,0:14:42.14:0,42,881	0/0:22,0:22:63.22:0,63,1318	0/0:11,0:11:33.10:0,33,641	0/0:15,0:15:39.13:0,39,817	0/0:26,0:26:78.25:0,78,1597	0/0:14,0:14:42.14:0,42,880
chr10	85687273	.	TA	T	8584.20	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=15.239;DP=607;FS=15.676;HRun=9;HaplotypeScore=64.4116;InbreedingCoeff=0.9777;MQ=66.08;MQ0=2;MQRankSum=-0.396;QD=22.12;ReadPosRankSum=1.101;VQSLOD=4.1229;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:54.03:494,54,0	1/1:1,12:13:35.97:321,36,0	0/0:13,0:11:17.36:0,17,148	0/0:4,1:2:5.91:0,6,50	0/0:31,1:32:59.79:0,60,925	0/0:23,0:23:66.17:0,66,748	1/1:3,12:15:27.01:247,27,0	1/1:5,19:24:56.98:507,57,0	0/0:30,0:30:75.21:0,75,854	1/1:4,20:24:59.96:539,60,0	1/1:4,36:40:99:971,108,0	1/1:4,26:30:72.04:658,72,0	1/1:2,11:13:33.02:302,33,0	1/1:3,12:15:36.01:329,36,0	0/0:21,0:21:60.16:0,60,680	0/0:23,0:23:57.16:0,57,649	1/1:3,23:26:43.99:529,44,0	1/1:3,17:20:48.02:439,48,0	1/1:2,10:12:30.01:270,30,0	1/1:3,23:26:68.92:613,69,0	1/1:2,15:17:36.02:329,36,0	0/0:17,0:18:44.95:0,45,489	0/0:15,1:16:11.61:0,12,363	0/0:9,0:9:27.08:0,27,311	0/0:29,0:29:87.17:0,87,985	1/1:4,30:34:89.99:804,90,0	1/1:4,44:48:99:1012,111,0	1/1:0,10:10:24.01:219,24,0
chr10	85688152	.	C	CAGGGTTAA	11366.78	PASS	AB=0.967;AC=11;AF=0.196;AN=56;BaseQRankSum=-1.866;DP=667;FS=3.592;HRun=0;HaplotypeScore=168.6263;InbreedingCoeff=0.8857;MQ=67.59;MQ0=0;MQRankSum=-15.282;QD=74.29;ReadPosRankSum=-2.566;VQSLOD=4.6650;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:14,20:37:87.26:3220,87,0	1/1:3,6:10:21.07:852,21,0	0/0:20,0:18:51.15:0,51,1180	0/0:24,0:24:56.82:0,57,1446	0/0:30,0:30:72.25:0,72,1954	0/0:22,0:22:54.19:0,54,1457	0/0:22,0:22:60.19:0,60,1581	0/0:32,0:32:78.25:0,78,2020	0/0:17,0:17:51.16:0,51,1302	1/1:11,12:25:72.25:2954,72,0	1/1:8,12:20:54.14:1864,54,0	0/0:23,0:23:60.19:0,60,1581	0/0:20,0:20:48.16:0,48,1287	0/0:18,0:18:51.18:0,51,1384	0/0:40,0:40:99:0,111,2914	0/0:26,0:26:66.21:0,66,1730	1/1:15,16:32:63.22:2421,63,0	0/0:29,0:29:69.18:0,69,1686	0/0:16,0:16:35.91:0,36,913	0/0:13,0:13:39.11:0,39,996	0/0:37,0:37:99:0,111,2972	0/0:26,0:26:75.26:0,75,2010	0/0:19,0:19:57.14:0,57,1391	0/0:20,0:20:57.18:0,57,1485	0/0:24,0:24:66.21:0,66,1734	0/1:28,1:29:54.44:54,0,1839	0/0:27,0:27:75.26:0,75,2035	0/0:9,0:9:27.09:0,27,734
chr10	85688433	.	G	GT	3210.18	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-7.763;DP=697;FS=6.733;HRun=9;HaplotypeScore=75.3179;InbreedingCoeff=0.9583;MQ=79.66;MQ0=0;MQRankSum=-0.836;QD=22.14;ReadPosRankSum=0.605;VQSLOD=4.4726;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,32:42:63.76:881,64,0	1/1:4,14:18:15.68:374,16,0	0/0:31,0:27:32.04:0,32,347	0/0:25,0:21:3.34:0,3,146	0/0:26,0:26:65.42:0,65,545	0/0:13,0:13:29.97:0,30,256	0/0:18,0:20:55.03:0,55,450	0/0:38,2:41:40.55:0,41,780	0/0:18,0:18:41.85:0,42,351	1/1:5,13:18:42.06:447,42,0	1/1:5,13:18:42.07:446,42,0	0/0:33,0:33:80.91:0,81,703	0/0:20,0:20:53.97:0,54,465	0/0:22,0:22:53.96:0,54,465	0/0:30,0:30:80.96:0,81,697	0/0:30,0:30:80.91:0,81,689	1/1:5,44:49:91.26:1235,91,0	0/0:24,0:24:56.94:0,57,488	0/0:15,0:15:29.93:0,30,252	0/0:19,0:19:50.99:0,51,443	0/0:21,1:22:26.79:0,27,457	0/0:20,0:20:56.99:0,57,495	0/0:16,0:16:38.95:0,39,334	0/0:27,0:27:60.62:0,61,568	0/0:24,0:24:68.94:0,69,591	0/0:26,1:27:32.86:0,33,508	0/0:37,0:38:99:0,101,865	0/0:11,0:11:26.97:0,27,230
chr10	85690492	.	GAAA	G	2997.99	PASS	AB=0.734;AC=22;AF=0.393;AN=56;BaseQRankSum=0.186;DP=628;FS=0.000;HRun=18;HaplotypeScore=97.1879;InbreedingCoeff=0.5967;MQ=53.25;MQ0=30;MQRankSum=-3.852;QD=9.25;ReadPosRankSum=0.640;VQSLOD=-0.3614;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,19:32:39.65:395,40,0	1/1:7,4:10:14.62:143,15,0	0/0:54,0:7:6:0,6,61	0/1:36,0:10:3.49:3,0,34	0/0:21,0:23:51.03:0,51,705	0/0:20,0:20:29.89:0,30,455	0/0:7,0:11:24.99:0,25,200	0/1:12,12:23:26.13:255,0,26	0/0:10,0:10:9:0,9,87	1/1:10,12:21:30.43:282,30,0	0/1:7,7:12:1.13:156,0,1	0/0:11,0:17:9.97:0,10,223	0/0:19,0:19:25.18:0,25,199	0/1:13,1:18:1.46:1,0,159	0/0:15,0:19:39.88:0,40,513	0/0:28,0:31:82.34:0,82,1108	1/1:7,18:24:35.96:352,36,0	0/0:21,0:32:58.51:0,59,438	0/1:12,10:20:16.58:222,0,17	0/1:7,9:17:21.90:201,0,22	1/1:7,9:16:8.61:166,9,0	0/0:7,0:11:20.93:0,21,217	0/0:10,0:14:32.90:0,33,382	0/0:17,0:18:35.44:0,35,399	0/0:14,0:14:28.62:0,29,484	1/1:15,14:30:35.32:391,35,0	1/1:10,10:20:32.59:307,33,0	1/1:7,11:18:34.09:322,34,0
chr10	85690710	.	A	ATG	4697.90	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-2.535;DP=635;FS=7.471;HRun=0;HaplotypeScore=80.0344;InbreedingCoeff=0.9859;MQ=73.80;MQ0=0;MQRankSum=0.011;QD=43.10;ReadPosRankSum=-0.369;VQSLOD=5.8150;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:45.85:1004,46,0	1/1:1,4:5:12.04:216,12,0	0/0:12,0:12:20.22:0,20,281	0/0:13,0:12:16.72:0,17,262	0/0:31,0:31:93.25:0,93,1228	0/0:24,0:24:63.18:0,63,846	0/0:22,0:22:63.20:0,63,863	0/0:38,0:38:99:0,99,1261	0/0:17,0:17:51.09:0,51,624	1/1:1,28:28:84.20:1331,84,0	1/1:1,19:20:42.14:746,42,0	0/0:19,0:19:54.13:0,54,716	0/0:32,0:32:81.17:0,81,1033	0/0:30,0:30:84.20:0,84,1070	0/0:20,0:20:54.17:0,54,737	0/0:40,0:40:99:0,111,1466	1/1:0,31:31:78.27:1401,78,0	0/0:21,0:21:57.19:0,57,796	0/0:16,0:16:45.11:0,45,578	0/0:28,0:28:84.23:0,84,1105	0/0:11,0:11:30.06:0,30,382	0/0:12,0:12:36.12:0,36,503	0/0:18,0:18:51.11:0,51,657	0/0:18,0:18:47.87:0,48,633	0/0:23,0:23:66.21:0,66,906	0/0:34,1:35:48.44:0,48,1285	0/0:32,0:32:93.18:0,93,1154	0/0:14,0:14:15.85:0,16,464
chr10	85692604	.	A	AT	1026.63	PASS	AB=0.724;AC=7;AF=0.125;AN=56;BaseQRankSum=-3.907;DP=619;FS=3.149;HRun=13;HaplotypeScore=76.6275;InbreedingCoeff=0.4986;MQ=73.87;MQ0=0;MQRankSum=-0.734;QD=8.85;ReadPosRankSum=-0.754;VQSLOD=2.8700;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,1:41:61.62:0,62,540	0/0:4,0:4:8.93:0,9,62	0/0:20,0:16:1.38:0,1,64	0/0:16,0:13:12.33:0,12,66	0/0:22,0:23:40.28:0,40,258	0/0:17,1:20:11.82:0,12,209	0/1:9,22:33:1.84:387,0,2	0/0:26,0:26:10.26:0,10,260	0/0:20,0:21:50.14:0,50,336	0/0:20,0:20:43.72:0,44,292	0/0:15,0:16:34.19:0,34,217	1/1:11,19:30:3.96:321,4,0	0/1:5,11:16:2.56:121,0,3	1/1:7,17:25:18.30:300,18,0	0/0:25,1:26:11.99:0,12,222	0/0:34,0:37:83.27:0,83,546	0/0:30,0:31:79.32:0,79,536	0/0:29,0:30:61.32:0,61,410	0/0:16,0:18:19.35:0,19,161	0/0:16,0:17:31.61:0,32,209	0/0:23,0:23:53.37:0,53,363	0/1:12,0:12:27.88:28,0,81	0/0:13,1:14:15.54:0,16,115	0/0:25,2:27:34.95:0,35,377	0/0:14,0:16:31.70:0,32,208	0/0:22,0:22:29.58:0,30,205	0/0:31,1:32:45.70:0,46,448	0/0:2,0:3:5.01:0,5,26
chr10	85692909	.	G	GACAGACTCCAAA	44425.88	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-6.827;DP=565;FS=7.866;HRun=0;HaplotypeScore=167.8951;InbreedingCoeff=0.9622;MQ=71.07;MQ0=0;MQRankSum=-18.237;QD=149.08;ReadPosRankSum=-0.031;VQSLOD=5.4172;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,26:38:99:5738,99,0	1/1:2,2:4:12.04:695,12,0	0/0:18,0:17:47.79:0,48,1257	0/0:12,0:12:17.71:0,18,642	0/0:24,0:24:72.25:0,72,2820	0/0:24,0:24:72.23:0,72,2634	1/1:7,6:15:39.13:1929,39,0	1/1:14,3:23:69.22:3217,69,0	0/0:24,0:24:72.25:0,72,2754	1/1:6,6:13:39.13:2178,39,0	1/1:5,10:15:39.13:1887,39,0	1/1:8,25:35:96.33:5816,96,0	1/1:11,10:22:60.21:3343,60,0	1/1:9,12:24:66.23:3931,66,0	0/0:28,0:28:81.28:0,81,3083	0/0:29,0:29:87.29:0,87,3187	1/1:5,10:16:42.14:2203,42,0	0/0:25,0:25:75.26:0,75,2761	1/1:0,3:3:9.03:572,9,0	1/1:7,11:21:54.18:2708,54,0	1/1:7,6:16:36.12:1594,36,0	0/0:19,0:19:54.17:0,54,1951	0/0:16,0:16:48.16:0,48,1788	0/0:27,0:27:75.26:0,75,2970	0/0:21,0:21:63.21:0,63,2374	1/1:3,14:18:54.17:3135,54,0	1/1:8,22:33:90.31:5436,90,0	1/1:1,0:1:3.01:44,3,0
chr10	85696158	.	C	CT	1940.30	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-8.156;DP=634;FS=3.179;HRun=7;HaplotypeScore=61.6881;InbreedingCoeff=0.9995;MQ=82.20;MQ0=0;MQRankSum=-3.310;QD=25.53;ReadPosRankSum=0.584;VQSLOD=4.2405;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:27:66.32:0,66,587	0/0:12,0:12:35.98:0,36,335	0/0:19,0:19:41.89:0,42,372	0/0:20,0:21:27.01:0,27,345	0/0:32,0:32:92.53:0,93,859	0/0:17,0:17:51.05:0,51,484	1/1:5,17:22:51.16:616,51,0	0/0:47,0:47:99:0,114,1087	0/0:13,0:13:36.05:0,36,348	0/0:25,0:25:66.10:0,66,637	0/0:16,0:16:42.06:0,42,405	1/1:3,15:18:36.11:435,36,0	1/1:0,18:18:51.16:616,51,0	1/1:5,13:18:36.11:434,36,0	0/0:41,0:41:99:0,117,1124	0/0:31,0:31:81.13:0,81,782	0/0:20,0:20:48.04:0,48,451	0/0:19,0:19:48.03:0,48,450	0/0:18,0:18:48.08:0,48,463	0/0:23,0:23:62.88:0,63,592	0/0:24,0:24:69.11:0,69,666	0/0:19,0:19:54.08:0,54,516	0/0:17,0:17:45.06:0,45,429	0/0:22,0:22:63.09:0,63,603	0/0:17,0:17:45.07:0,45,435	0/0:32,0:32:84.12:0,84,811	0/0:26,0:27:68.12:0,68,636	0/0:19,0:19:48.07:0,48,463
chr10	85698135	.	CTA	C	429.68	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.807;DP=715;FS=0.000;HRun=0;HaplotypeScore=80.7945;InbreedingCoeff=0.9878;MQ=89.74;MQ0=0;MQRankSum=-2.570;QD=28.65;ReadPosRankSum=0.706;VQSLOD=4.7768;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,2271	0/0:11,0:11:33.11:0,33,618	0/0:25,0:25:63.21:0,63,1141	0/0:31,0:31:87.30:0,87,1615	0/0:24,0:24:63.22:0,63,1155	0/0:19,0:19:57.20:0,57,1049	0/0:30,0:30:90.31:0,90,1685	0/0:38,0:38:99:0,105,1951	0/0:21,0:21:63.22:0,63,1168	0/0:34,0:34:99:0,99,1825	0/0:7,0:7:21.07:0,21,393	0/0:24,0:24:72.25:0,72,1348	0/0:28,0:28:81.26:0,81,1485	0/0:21,0:21:60.21:0,60,1123	0/0:37,0:37:99:0,108,2016	0/0:35,0:35:99:0,105,1967	0/0:29,0:29:87.30:0,87,1630	1/1:1,14:15:36.12:524,36,0	0/0:19,0:19:54.18:0,54,1000	0/0:29,0:29:87.30:0,87,1607	0/0:25,0:25:75.21:0,75,1337	0/0:26,0:26:75.26:0,75,1404	0/0:18,0:18:51.17:0,51,941	0/0:27,0:27:78.27:0,78,1460	0/0:24,0:24:72.25:0,72,1337	0/0:32,0:32:96.33:0,96,1799	0/0:36,0:36:99:0,108,2022	0/0:8,0:8:18.06:0,18,337
chr10	85698348	.	G	GTGCTCT	2504.84	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.822;DP=692;FS=4.880;HRun=0;HaplotypeScore=181.2734;InbreedingCoeff=0.9742;MQ=69.14;MQ0=4;MQRankSum=-5.833;QD=26.37;ReadPosRankSum=-1.778;VQSLOD=2.6041;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,5:28:25.60:709,26,0	1/1:5,4:9:11.24:300,11,0	0/0:38,0:24:48.29:0,48,790	0/0:42,0:28:11.21:0,11,744	0/0:27,0:26:63.05:0,63,1207	0/0:16,0:16:44.45:0,44,893	0/0:26,0:26:66.17:0,66,1348	0/0:43,0:42:99:0,100,1904	0/0:26,0:26:57.60:0,58,1474	1/1:19,5:27:61.41:1086,61,0	1/1:11,6:18:12.03:190,12,0	0/0:30,0:29:65.80:0,66,1557	0/0:25,0:25:44.59:0,45,1022	0/0:19,0:19:39.12:0,39,826	0/0:30,0:30:72.93:0,73,1918	0/0:38,0:38:99:0,102,2194	1/1:11,1:13:22.66:390,23,0	0/0:25,0:25:44.85:0,45,825	0/0:17,0:15:34.22:0,34,804	0/0:15,0:15:32.99:0,33,619	0/0:19,0:19:27.07:0,27,553	0/0:24,0:23:65.71:0,66,1221	0/0:19,0:19:50.49:0,50,953	0/0:28,0:28:64.51:0,65,1405	0/0:17,0:17:43.43:0,43,927	0/0:24,0:24:69.05:0,69,1358	0/0:29,0:29:71.54:0,72,1362	0/0:19,0:19:38.78:0,39,632
chr10	85698382	.	C	CTGTGTG	3444.83	PASS	AB=0.966;AC=20;AF=0.357;AN=56;BaseQRankSum=1.476;DP=736;FS=39.922;HRun=0;HaplotypeScore=203.7525;InbreedingCoeff=0.4336;MQ=55.05;MQ0=21;MQRankSum=-5.604;QD=10.01;ReadPosRankSum=-3.619;VQSLOD=0.9693;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:28.42:0,28,384	0/0:6,0:7:6.38:0,6,58	1/1:34,0:8:2.37:8,2,0	0/0:46,0:12:3.01:0,3,32	0/0:31,0:33:64.38:0,64,1044	0/0:17,0:17:21.05:0,21,369	0/1:32,3:37:8.29:472,0,8	1/1:20,0:19:18.13:154,18,0	0/0:24,0:26:25.05:0,25,710	0/1:34,0:34:44.78:45,0,254	0/0:24,0:25:3.33:0,3,63	1/1:26,7:33:47.56:1109,48,0	1/1:16,15:34:30.09:766,30,0	1/1:12,9:23:15.05:489,15,0	0/0:31,0:35:55.31:0,55,1136	0/0:38,0:39:64.73:0,65,1257	0/1:16,0:17:16.76:17,0,139	1/1:13,0:30:19.45:236,19,0	1/1:15,0:11:6:55,6,0	0/0:16,0:16:6.49:0,6,72	0/1:27,0:27:6.56:7,0,130	0/0:23,0:25:20.61:0,21,659	0/0:20,0:22:40.27:0,40,744	0/0:32,0:33:52.30:0,52,1238	0/0:15,0:15:12.95:0,13,271	0/1:21,0:20:50.68:75,0,51	0/0:23,0:23:16.90:0,17,193	0/1:16,0:15:12.24:12,0,98
chr10	85698400	.	GTGTGTGTGTGTC	G	1014.13	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=4.148;DP=699;FS=19.107;HRun=0;HaplotypeScore=245.6955;InbreedingCoeff=0.3808;MQ=50.64;MQ0=18;MQRankSum=-1.514;QD=7.92;ReadPosRankSum=-3.678;VQSLOD=0.8076;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,11:27:15.44:431,15,0	0/1:9,0:9:5:106,0,5	0/0:16,0:1:2.96:0,3,19	0/0:31,0:3:3.01:0,3,33	0/0:35,0:34:63.66:0,64,2908	0/0:16,0:16:27.55:0,28,1316	0/0:44,0:44:49.14:0,49,1500	0/1:20,0:19:60.36:60,0,95	0/0:22,0:22:24.08:0,24,1129	1/1:36,0:35:16.48:351,16,0	0/0:22,0:22:1.09:0,1,6	0/0:33,0:32:47.79:0,48,1702	0/0:32,0:32:27.08:0,27,1113	0/0:22,0:21:9.02:0,9,342	0/0:33,0:33:63.13:0,63,2256	0/0:36,0:36:75.22:0,75,3264	0/1:18,0:18:24.30:197,0,24	0/0:29,0:29:38.76:0,39,1457	0/0:11,0:7:0:0,0,0	0/1:17,0:17:8.96:9,0,200	0/0:29,0:29:15.05:0,15,416	0/0:26,0:26:45.14:0,45,2094	0/0:22,0:21:42.11:0,42,1876	0/0:43,0:42:99:0,99,3750	0/0:15,0:15:29.56:0,30,1207	0/0:20,0:18:25.90:0,26,748	0/0:20,0:20:21.54:0,22,731	0/0:14,0:13:9.03:0,9,276
chr10	85698402	.	GTGTGTGTGTC	G	1642.48	PASS	AB=0.890;AC=9;AF=0.161;AN=56;BaseQRankSum=4.068;DP=704;FS=11.614;HRun=0;HaplotypeScore=225.1037;InbreedingCoeff=-0.0677;MQ=50.73;MQ0=17;MQRankSum=-3.837;QD=8.60;ReadPosRankSum=-4.217;VQSLOD=0.6455;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:27:99:265,0,116	0/1:8,1:9:18.22:150,0,18	0/0:16,0:2:5.95:0,6,44	0/0:32,0:4:2.08:0,2,43	0/0:35,0:34:75.59:0,76,2832	0/0:17,0:17:36.07:0,36,1220	0/0:45,0:45:56.42:0,56,1301	0/1:22,0:21:19.28:160,0,19	0/0:22,0:22:27.97:0,28,1277	0/1:17,18:34:8.13:764,0,8	0/1:9,13:22:27.74:33,0,28	0/0:34,0:33:49.36:0,49,1353	0/0:32,0:32:29.51:0,30,924	0/0:23,0:22:9.02:0,9,291	0/0:33,0:33:78.67:0,79,2327	0/0:37,0:37:95.93:0,96,3185	0/1:14,4:18:7.59:385,0,8	0/1:29,0:29:2.72:3,0,1222	0/1:10,0:6:0:0,0,0	0/1:18,0:18:8.96:9,0,147	0/0:26,0:26:15.12:0,15,283	0/0:26,0:26:58.24:0,58,1994	0/0:22,0:21:46.69:0,47,1720	0/0:43,0:42:99:0,115,3356	0/0:14,0:14:30.44:0,30,1091	0/0:20,0:19:0.62:0,1,513	0/0:21,0:21:20.99:0,21,546	0/0:14,0:13:9.03:0,9,198
chr10	85698410	.	GTC	G	2338.18	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=9.723;DP=695;FS=0.000;HRun=0;HaplotypeScore=148.6660;InbreedingCoeff=0.4031;MQ=51.67;MQ0=9;MQRankSum=-3.733;QD=7.90;ReadPosRankSum=-2.145;VQSLOD=2.6259;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:25:58.04:58,0,167	1/1:7,0:7:1.89:93,2,0	0/0:15,0:6:2.20:0,2,58	0/0:36,0:8:1.34:0,1,74	0/0:35,0:34:33.84:0,34,1089	0/0:16,0:16:35.71:0,36,478	0/0:45,0:45:8.10:0,8,543	1/1:1,22:23:67.45:530,67,0	0/0:23,0:23:27.87:0,28,689	0/1:28,0:28:99:257,0,113	0/1:19,0:19:12.32:12,0,52	0/1:33,0:32:83.58:84,0,325	0/1:34,0:34:2.98:3,0,355	0/0:22,0:21:20.98:0,21,182	0/0:32,0:32:37.46:0,37,1079	0/0:36,0:36:49.91:0,50,1243	1/1:17,1:17:7.63:207,8,0	0/0:29,0:29:2.01:0,2,435	0/1:8,0:4:17.21:17,0,22	1/1:2,16:18:8.58:109,9,0	1/1:3,24:27:23.20:238,23,0	0/0:28,0:28:5:0,5,763	0/0:18,0:18:7.29:0,7,640	0/0:49,0:49:83.58:0,84,1480	0/0:15,0:15:26.08:0,26,415	1/1:4,19:21:53.41:446,53,0	1/1:1,20:21:23.67:333,24,0	1/1:2,9:11:11.98:138,12,0
chr10	85699911	.	CCCA	C	879.09	PASS	AB=0.955;AC=8;AF=0.143;AN=56;BaseQRankSum=0.801;DP=488;FS=25.405;HRun=0;HaplotypeScore=97.3285;InbreedingCoeff=0.0993;MQ=71.99;MQ0=5;MQRankSum=-3.287;QD=6.87;ReadPosRankSum=5.199;VQSLOD=0.6429;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:77.61:0,78,594	0/0:15,0:15:24.49:0,24,254	0/0:27,0:14:28.88:0,29,395	0/0:22,0:10:20.86:0,21,180	0/0:6,0:6:9.01:0,9,120	0/0:22,0:22:34.11:0,34,692	0/1:19,2:21:53.05:266,0,53	0/0:18,0:18:47.73:0,48,432	0/0:14,0:14:29.92:0,30,309	0/0:19,0:19:50.17:0,50,358	0/0:9,0:9:2.74:0,3,91	0/1:16,2:18:63.23:173,0,63	0/1:20,1:21:42.16:208,0,42	1/1:15,3:18:19.02:317,19,0	0/0:23,0:23:50.65:0,51,584	0/0:13,0:13:32.95:0,33,394	0/0:38,0:38:83.28:0,83,559	0/0:15,0:15:9.85:0,10,65	0/1:14,0:14:10.79:11,0,66	0/1:12,0:11:13.87:16,0,14	0/0:28,1:28:43.91:0,44,202	0/0:5,0:5:15:0,15,154	0/0:5,0:5:11.97:0,12,110	0/0:9,0:9:15.05:0,15,218	0/0:11,0:11:19.94:0,20,304	0/0:15,0:15:32.30:0,32,281	0/1:23,1:23:28.36:28,0,147	0/0:11,0:11:29.96:0,30,274
chr10	85699914	.	AC	A	2591.28	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=1.417;DP=471;FS=0.000;HRun=12;HaplotypeScore=73.4846;InbreedingCoeff=0.7715;MQ=73.32;MQ0=5;MQRankSum=-0.492;QD=7.58;ReadPosRankSum=8.895;VQSLOD=1.5489;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,22:33:65.73:509,66,0	1/1:10,5:15:17.91:139,18,0	0/0:27,1:15:14.43:0,14,183	0/1:23,0:11:2.78:3,0,63	0/0:5,0:5:3:0,3,25	0/0:22,0:22:32.64:0,33,250	1/1:7,0:22:2.98:59,3,0	1/1:14,1:15:5.92:46,6,0	0/0:10,0:10:11.91:0,12,88	1/1:7,12:19:41.80:318,42,0	1/1:3,5:8:20.91:161,21,0	1/1:6,0:16:20.36:59,20,0	1/1:4,0:19:30.55:90,31,0	1/1:5,0:17:30.54:89,31,0	0/0:20,1:21:15:0,15,216	0/0:13,0:13:23.38:0,23,149	1/1:7,32:39:98.61:764,99,0	1/1:5,0:16:24.44:70,24,0	1/1:9,0:13:1.63:45,2,0	1/1:4,0:10:21.24:72,21,0	1/1:12,0:28:41.21:118,41,0	0/0:5,0:5:5.86:0,6,35	0/0:4,0:4:2.92:0,3,17	0/0:9,0:9:14.47:0,14,86	0/0:12,0:12:21.64:0,22,158	1/1:12,2:14:24.44:146,24,0	1/1:11,0:21:28.06:81,28,0	1/1:9,2:11:2.94:23,3,0
chr10	85701710	.	T	TTTTTG	7542.23	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-10.620;DP=669;FS=11.528;HRun=0;HaplotypeScore=127.2240;InbreedingCoeff=0.9387;MQ=75.87;MQ0=4;MQRankSum=-1.132;QD=40.99;ReadPosRankSum=-2.926;VQSLOD=3.5353;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:68.56:0,69,1150	0/0:11,0:11:24.07:0,24,407	0/0:28,0:23:1.38:0,1,288	0/0:29,0:23:5.95:0,6,81	0/0:29,0:29:66.23:0,66,1198	0/0:27,0:27:54.18:0,54,953	0/0:25,0:25:57.12:0,57,982	1/1:20,9:29:39.12:731,39,0	0/0:18,0:18:45.14:0,45,791	0/0:25,0:25:47.78:0,48,857	0/0:20,0:20:42.14:0,42,768	0/0:28,0:28:57.20:0,57,1031	0/0:14,0:14:27.09:0,27,496	0/0:16,0:16:42.14:0,42,759	0/0:26,0:26:57.20:0,57,1041	0/0:14,0:14:36.11:0,36,634	0/0:19,0:19:36.12:0,36,658	0/0:20,0:20:36.12:0,36,661	1/1:13,14:29:54.17:1237,54,0	1/1:9,23:33:72.09:1757,72,0	1/1:11,19:31:45.15:1228,45,0	0/0:22,0:22:54.17:0,54,956	0/0:23,0:23:45.15:0,45,823	0/0:24,0:24:57.05:0,57,948	0/0:23,0:23:45.14:0,45,800	1/1:12,16:30:54.18:1345,54,0	1/1:10,10:21:30.04:843,30,0	1/1:2,8:10:15.05:401,15,0
chr10	85702196	.	C	CCACACACACA	7833.95	PASS	AB=0.672;AC=34;AF=0.630;AN=54;BaseQRankSum=0.836;DP=658;FS=0.000;HRun=0;HaplotypeScore=208.9605;InbreedingCoeff=0.6695;MQ=58.84;MQ0=5;MQRankSum=-6.338;QD=17.56;ReadPosRankSum=-5.564;VQSLOD=1.4005;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:34:27.09:766,27,0	1/1:11,0:10:6.02:145,6,0	1/1:30,0:19:0.47:1,0,0	./.	0/0:11,0:11:18.06:0,18,473	0/0:20,0:21:18.05:0,18,409	0/1:19,0:29:20.37:111,0,20	1/1:32,0:31:35.87:484,36,0	0/0:15,0:17:3.27:0,3,593	1/1:24,0:26:40.02:1111,40,0	1/1:14,0:18:6.02:173,6,0	1/1:23,0:41:17.76:490,18,0	1/1:17,0:25:24.34:611,24,0	1/1:18,0:29:18.06:450,18,0	0/0:24,0:27:42.13:0,42,1082	0/0:25,0:28:37.01:0,37,1000	1/1:16,2:20:9.03:421,9,0	0/1:8,0:24:91.64:211,0,92	1/1:15,0:16:12.01:269,12,0	1/1:16,0:19:5.38:145,5,0	1/1:20,0:24:2.69:148,3,0	0/0:8,0:10:15:0,15,234	0/0:13,0:15:27.09:0,27,704	0/0:37,0:40:63.21:0,63,1715	0/0:7,0:7:6.02:0,6,113	1/1:18,5:28:36.07:773,36,0	1/1:24,1:31:32.01:1294,32,0	1/1:6,0:6:5.82:231,6,0
chr10	85703604	.	TTTTTTTTTC	T	3477.01	PASS	AB=0.967;AC=13;AF=0.232;AN=56;BaseQRankSum=9.359;DP=544;FS=7.312;HRun=0;HaplotypeScore=117.6197;InbreedingCoeff=0.8296;MQ=51.87;MQ0=41;MQRankSum=-4.091;QD=28.50;ReadPosRankSum=2.596;VQSLOD=2.5266;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:26:51.18:0,51,1841	0/0:7,0:7:12.04:0,12,453	0/0:38,0:9:27.08:0,27,808	0/0:26,0:7:10.45:0,10,277	0/0:23,0:23:53.73:0,54,1688	0/0:26,0:24:60.15:0,60,2342	0/0:14,0:14:30.06:0,30,855	1/1:4,22:25:11.60:663,12,0	0/0:11,0:10:30.09:0,30,1071	0/0:23,0:18:45.15:0,45,1617	0/0:13,0:10:25.80:0,26,780	0/0:20,0:15:26.89:0,27,702	0/0:17,0:15:33.11:0,33,928	0/0:19,0:15:39.13:0,39,956	0/0:26,0:24:60.20:0,60,2147	0/0:24,0:23:63.17:0,63,2335	0/0:17,0:16:12.23:0,12,898	0/0:20,0:18:39.09:0,39,1323	1/1:8,11:19:47.89:969,48,0	1/1:1,11:12:26.50:482,26,0	1/1:1,19:20:11.68:258,12,0	0/0:18,0:15:38.42:0,38,1192	0/0:12,0:12:30.03:0,30,806	0/0:17,0:16:29.81:0,30,1151	0/0:22,0:21:54.17:0,54,1958	0/1:28,1:27:99:518,0,227	1/1:2,8:10:24.08:562,24,0	1/1:6,0:4:3:25,3,0
chr10	85703605	.	TTTTTTTTC	T	2944.11	PASS	AB=0.590;AC=13;AF=0.232;AN=56;BaseQRankSum=9.875;DP=542;FS=7.400;HRun=0;HaplotypeScore=110.6167;InbreedingCoeff=0.8309;MQ=52.11;MQ0=41;MQRankSum=-4.288;QD=25.60;ReadPosRankSum=3.217;VQSLOD=2.7688;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:26:51.17:0,51,1593	0/0:7,0:7:12.04:0,12,394	0/0:38,0:9:27.09:0,27,735	0/0:25,0:7:10.70:0,11,249	0/0:23,0:23:50.37:0,50,1433	0/0:27,0:24:60.15:0,60,2075	0/0:15,0:15:33:0,33,746	1/1:25,0:24:31.11:525,31,0	0/0:11,0:10:30.09:0,30,944	0/0:23,0:17:45.15:0,45,1430	0/0:13,0:10:25.29:0,25,665	0/0:21,0:16:28.17:0,28,600	0/0:17,0:15:33.11:0,33,768	0/0:19,0:15:39.11:0,39,761	0/0:26,0:24:60.18:0,60,1871	0/0:24,0:23:63.17:0,63,2050	0/0:17,0:16:10.49:0,10,762	0/0:21,0:19:42.06:0,42,1172	1/1:19,0:19:47.90:714,48,0	1/1:11,0:12:24.38:335,24,0	1/1:20,0:20:9.63:171,10,0	0/0:18,0:15:38.41:0,38,1003	0/0:14,0:14:38.61:0,39,746	0/0:17,0:16:29.93:0,30,1009	0/0:22,0:21:54.14:0,54,1713	0/1:7,16:21:99:843,0,107	1/1:8,2:10:24.08:484,24,0	1/1:2,4:4:3.01:53,3,0
chr10	85703876	.	C	CGTGTGTGT	6328.71	PASS	AB=0.921;AC=32;AF=0.593;AN=54;BaseQRankSum=2.720;DP=631;FS=0.000;HRun=0;HaplotypeScore=195.0583;InbreedingCoeff=0.7572;MQ=51.80;MQ0=15;MQRankSum=-6.916;QD=17.43;ReadPosRankSum=-5.785;VQSLOD=2.3631;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:24.02:499,24,0	1/1:5,3:9:8.98:351,9,0	0/0:37,0:14:2.83:0,3,29	./.	0/0:20,0:22:36.11:0,36,789	0/0:16,0:18:31.87:0,32,614	1/1:28,0:27:6:193,6,0	1/1:27,0:22:14.74:402,15,0	0/0:17,0:17:39.10:0,39,874	1/1:13,5:17:23.97:478,24,0	1/1:8,4:14:6.02:227,6,0	1/1:24,0:24:21.04:521,21,0	1/1:15,0:15:12:295,12,0	1/1:17,0:21:2.90:94,3,0	0/0:23,0:27:45.15:0,45,987	0/0:26,0:26:51.16:0,51,1183	0/1:26,6:31:34.82:1074,0,35	0/0:26,0:25:47.83:0,48,950	1/1:20,0:18:9.03:222,9,0	1/1:11,0:14:5.95:123,6,0	0/1:34,0:34:0.27:1,0,0	1/1:5,0:11:15:177,15,0	0/0:16,0:20:39.12:0,39,825	0/0:27,0:28:48.12:0,48,1112	0/0:16,0:17:30.10:0,30,703	1/1:26,0:25:31.63:718,32,0	1/1:21,0:22:24.08:823,24,0	1/1:13,0:12:6.02:132,6,0
chr10	85705158	.	TTTTC	T	4866.23	PASS	AB=0.609;AC=13;AF=0.232;AN=56;BaseQRankSum=11.825;DP=559;FS=6.092;HRun=0;HaplotypeScore=94.8033;InbreedingCoeff=0.8985;MQ=70.03;MQ0=1;MQRankSum=-5.514;QD=43.45;ReadPosRankSum=2.507;VQSLOD=5.3697;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,105,2574	0/0:9,0:9:27.09:0,27,707	0/0:26,0:22:45.36:0,45,1208	0/0:20,0:19:42.36:0,42,1002	0/0:13,0:13:36.10:0,36,885	0/0:14,0:14:36.12:0,36,895	0/0:26,0:26:78.27:0,78,1968	1/1:1,14:15:42.14:761,42,0	0/0:24,0:24:72.25:0,72,1834	0/0:24,0:24:66.23:0,66,1726	0/0:8,0:8:24.08:0,24,623	0/0:20,0:20:54.19:0,54,1361	0/0:16,0:16:45.15:0,45,1155	0/0:34,0:34:90.29:0,90,2220	0/0:27,0:27:81.28:0,81,2110	0/0:22,0:22:60.21:0,60,1511	0/0:42,0:42:99:0,120,3097	0/0:18,0:18:48.15:0,48,1164	1/1:1,15:15:41.62:708,42,0	1/1:1,10:11:27.09:490,27,0	1/1:3,25:27:61.45:1142,61,0	0/0:11,0:11:30.10:0,30,766	0/0:14,0:14:39.13:0,39,974	0/0:14,0:14:42.14:0,42,1100	0/0:23,0:23:60.21:0,60,1510	0/1:5,9:14:99:457,0,103	1/1:2,18:20:48.16:872,48,0	1/1:0,8:8:24.08:436,24,0
chr10	85705812	.	ACCC	A	4322.99	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=2.967;DP=436;FS=2.519;HRun=11;HaplotypeScore=75.8022;InbreedingCoeff=0.9585;MQ=74.74;MQ0=0;MQRankSum=-2.656;QD=31.33;ReadPosRankSum=4.277;VQSLOD=4.3470;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:29:58.05:0,58,443	0/0:2,0:6:8.79:0,9,72	0/0:15,0:17:23.45:0,23,398	0/0:4,0:6:9.70:0,10,159	0/0:6,0:7:15.03:0,15,265	0/0:14,0:14:39.11:0,39,676	0/0:21,0:24:48.10:0,48,814	1/1:5,21:26:63.17:828,63,0	0/0:11,0:11:20.09:0,20,371	0/0:2,0:17:46.11:0,46,374	0/0:2,0:9:22.17:0,22,164	0/0:13,0:15:35.39:0,35,491	0/0:15,0:16:30.05:0,30,488	0/0:14,0:14:36.11:0,36,617	0/0:18,0:19:48.08:0,48,790	0/0:15,0:16:36.07:0,36,547	0/0:13,0:27:41.39:0,41,371	0/0:13,0:13:27.09:0,27,420	1/1:3,12:16:32.96:392,33,0	1/1:0,13:13:33.09:434,33,0	1/1:3,21:25:49.71:668,50,0	0/0:6,0:6:12.03:0,12,192	0/0:2,0:3:9.01:0,9,135	0/0:17,0:18:44.67:0,45,788	0/0:11,0:11:24.06:0,24,411	1/1:5,26:31:81.24:1055,81,0	1/1:0,15:15:42.14:552,42,0	1/1:1,11:12:30.09:394,30,0
chr10	85709852	.	T	TGG	2467.75	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-3.984;DP=540;FS=0.000;HRun=7;HaplotypeScore=75.1801;InbreedingCoeff=0.9497;MQ=85.03;MQ0=1;MQRankSum=-0.942;QD=25.44;ReadPosRankSum=-4.453;VQSLOD=2.0299;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:69.12:0,69,783	0/0:7,0:7:15:0,15,159	0/0:16,0:16:23.23:0,23,368	0/0:21,0:21:46.11:0,46,501	0/0:16,0:16:42.12:0,42,489	0/0:21,0:21:48.12:0,48,555	0/0:29,0:29:72.18:0,72,827	1/1:5,7:13:23.97:304,24,0	0/0:15,0:15:45.13:0,45,524	0/0:19,0:19:39.10:0,39,454	0/0:5,0:5:9.02:0,9,105	0/0:34,0:34:90.25:0,90,1035	0/0:11,0:11:30.09:0,30,350	0/0:22,0:22:57.13:0,57,642	0/0:24,0:24:51.13:0,51,594	0/0:25,0:25:57.14:0,57,663	0/0:45,0:45:99:0,102,1183	0/0:33,0:33:81.22:0,81,944	1/1:3,12:15:36.12:563,36,0	1/1:2,5:7:12.03:173,12,0	1/1:7,17:27:44.12:658,44,0	0/0:8,0:8:9:0,9,94	0/0:12,0:12:27.06:0,27,303	0/0:29,0:29:72.16:0,72,817	0/0:18,0:18:45.12:0,45,522	1/1:4,9:14:26.56:373,27,0	1/1:4,14:18:30.10:491,30,0	1/1:1,2:2:6.02:98,6,0
chr10	85710776	.	TAAAG	T	621.43	PASS	AB=0.908;AC=10;AF=0.185;AN=54;BaseQRankSum=6.676;DP=340;FS=3.997;HRun=0;HaplotypeScore=81.3185;InbreedingCoeff=0.3747;MQ=66.51;MQ0=3;MQRankSum=-1.357;QD=6.98;ReadPosRankSum=-0.245;VQSLOD=1.9420;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:16:16.20:0,16,258	0/0:5,0:5:3:0,3,25	0/0:14,0:11:33.04:0,33,320	0/0:12,0:8:23.83:0,24,197	0/0:11,0:11:32.95:0,33,386	0/0:25,0:24:72.08:0,72,1247	0/0:8,0:8:23.97:0,24,202	0/1:17,24:33:99:350,0,261	0/0:9,0:9:27.05:0,27,516	0/0:10,0:10:7.78:0,8,159	0/1:6,0:6:0.21:0,0,111	0/0:7,0:7:17.92:0,18,192	0/0:10,0:10:10.28:0,10,326	0/0:8,0:8:2.51:0,3,88	0/0:12,0:12:36.05:0,36,672	0/0:15,0:15:44.93:0,45,639	0/0:29,0:29:28.27:0,28,364	0/0:21,0:21:17.17:0,17,479	0/1:17,0:14:78.69:79,0,129	0/1:7,0:7:47.98:67,0,48	1/1:3,0:3:1.25:14,1,0	0/0:9,0:9:23.92:0,24,193	0/0:8,0:8:23.37:0,23,231	0/0:7,0:5:15.01:0,15,237	0/0:11,0:11:33.05:0,33,572	1/1:12,0:12:26.68:191,27,0	1/1:3,0:3:8.80:61,9,0	./.
chr10	85710777	.	AAAGG	A	555.60	PASS	AB=0.990;AC=12;AF=0.222;AN=54;BaseQRankSum=6.314;DP=343;FS=3.911;HRun=0;HaplotypeScore=82.1304;InbreedingCoeff=0.2076;MQ=66.51;MQ0=3;MQRankSum=-5.070;QD=4.83;ReadPosRankSum=0.476;VQSLOD=1.2640;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:17:9.34:9,0,309	0/0:5,0:5:11.20:0,11,52	0/0:14,0:11:32.95:0,33,435	0/0:12,0:8:23.70:0,24,216	0/0:11,0:11:27.09:0,27,476	0/0:25,0:24:66.23:0,66,1444	0/0:8,0:8:24.08:0,24,409	0/0:41,0:33:9.34:0,9,117	0/0:10,0:10:30.10:0,30,652	0/1:10,0:10:0.64:1,0,281	0/1:7,0:7:14.06:14,0,180	0/0:7,0:7:15.05:0,15,270	0/1:10,1:11:5.45:5,0,475	0/1:8,0:8:23.08:23,0,134	0/0:12,0:12:36.12:0,36,787	0/0:14,0:14:42.13:0,42,785	0/0:29,0:29:18.27:0,18,330	0/1:22,0:22:0.53:1,0,760	0/1:16,0:13:54.73:55,0,91	0/1:7,0:7:10.70:157,0,11	0/0:3,0:3:0.43:0,0,1	0/0:9,0:9:24.08:0,24,402	0/0:8,0:8:24.08:0,24,406	0/0:7,0:5:15.05:0,15,283	0/0:11,0:11:33.11:0,33,710	1/1:10,2:12:23.53:315,24,0	1/1:2,1:3:9.03:119,9,0	./.
chr10	85710788	.	CGAAGAAAG	C	1268.97	PASS	AB=0.667;AC=13;AF=0.232;AN=56;BaseQRankSum=5.859;DP=371;FS=8.509;HRun=0;HaplotypeScore=115.2152;InbreedingCoeff=0.7875;MQ=66.86;MQ0=5;MQRankSum=-0.122;QD=15.67;ReadPosRankSum=-2.874;VQSLOD=1.4716;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:36.43:0,36,546	0/0:5,0:5:15.03:0,15,186	0/0:21,0:11:2.94:0,3,18	0/0:13,0:8:2.98:0,3,21	0/0:11,0:11:27.09:0,27,980	0/0:24,0:24:54.17:0,54,1931	0/0:9,0:9:27.07:0,27,799	1/1:31,0:23:20.86:165,21,0	0/0:15,0:15:33.06:0,33,1030	0/0:13,0:12:36.06:0,36,750	0/0:7,0:7:14.96:0,15,261	0/0:8,0:8:21.03:0,21,622	0/0:11,0:11:27.09:0,27,892	0/0:8,0:8:17.99:0,18,521	0/0:13,0:13:30.09:0,30,958	0/0:13,0:13:30.10:0,30,1110	0/0:29,0:27:34.80:0,35,257	0/0:23,0:23:54.07:0,54,1777	1/1:8,7:15:20.92:274,21,0	1/1:1,9:10:26.80:413,27,0	1/1:5,0:5:11.73:79,12,0	0/0:10,0:10:27.09:0,27,992	0/0:9,0:9:21.05:0,21,745	0/0:6,0:6:15.05:0,15,512	0/0:16,0:16:39.12:0,39,1306	1/1:4,9:13:25.77:429,26,0	0/1:2,2:4:13.18:66,0,13	1/1:3,0:3:2.99:23,3,0
chr10	85711620	.	CGTGTGTGTGTGTGTGTGTGTGT	C	1912.94	PASS	AB=0.650;AC=17;AF=0.304;AN=56;BaseQRankSum=5.272;DP=565;FS=37.494;HRun=0;HaplotypeScore=273.7292;InbreedingCoeff=0.6672;MQ=52.86;MQ0=11;MQRankSum=-2.431;QD=11.81;ReadPosRankSum=-1.668;VQSLOD=1.2195;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,9:27:3.01:174,3,0	1/1:8,0:8:7.27:101,7,0	0/0:20,0:11:6.02:0,6,99	0/0:23,0:19:15.04:0,15,269	0/0:15,0:16:18.49:0,18,830	0/0:19,0:19:9.03:0,9,787	1/1:18,0:17:11.93:185,12,0	0/0:16,0:13:3.01:0,3,104	0/0:17,0:17:27.91:0,28,1410	1/1:10,8:17:14.30:335,14,0	1/1:5,8:13:6.02:320,6,0	1/1:11,0:26:9.03:294,9,0	0/1:6,1:13:7.96:279,0,8	1/1:8,0:19:6.02:227,6,0	0/0:25,0:26:2.96:0,3,273	0/0:8,0:20:15.52:0,16,1160	1/1:13,7:20:3.01:174,3,0	0/0:12,0:16:12.44:0,12,278	0/0:15,0:20:24.08:0,24,991	0/0:5,0:13:9.03:0,9,310	0/0:61,0:61:54.06:0,54,1381	0/0:16,0:16:9.01:0,9,468	0/0:13,0:13:9.03:0,9,243	0/0:38,0:42:54.19:0,54,3565	0/0:17,0:16:9.03:0,9,496	0/0:19,0:26:41.28:0,41,1156	0/0:6,0:11:15.05:0,15,631	0/0:3,0:6:9.03:0,9,380
chr10	85719917	.	G	GGGAT	2681.45	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-6.233;DP=671;FS=2.761;HRun=0;HaplotypeScore=103.9410;InbreedingCoeff=0.9275;MQ=75.05;MQ0=5;MQRankSum=1.173;QD=19.02;ReadPosRankSum=-2.141;VQSLOD=3.2599;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:69.18:0,69,1011	0/0:12,0:13:27.08:0,27,402	0/0:33,0:20:12.04:0,12,164	0/0:32,0:28:5.73:0,6,34	0/0:25,0:25:42.13:0,42,634	0/0:28,0:30:54.12:0,54,805	0/0:21,0:21:33.11:0,33,514	1/1:30,0:29:18.02:270,18,0	0/0:20,0:20:33.10:0,33,490	0/0:23,0:23:33.11:0,33,517	0/0:12,0:12:15.03:0,15,212	0/0:28,0:29:45.13:0,45,661	0/0:17,0:17:33.11:0,33,513	0/0:23,0:23:42.14:0,42,654	0/0:24,0:24:45.14:0,45,684	0/0:27,0:27:39.13:0,39,611	0/0:33,0:33:57.19:0,57,894	0/0:9,0:21:15.03:0,15,187	1/1:13,5:19:21.01:377,21,0	1/1:6,6:12:18.06:386,18,0	1/1:17,19:36:15.16:828,15,0	0/0:24,0:25:51.14:0,51,715	0/0:24,0:24:29.96:0,30,424	0/0:31,0:31:60.14:0,60,890	0/0:15,0:15:24.05:0,24,331	1/1:17,12:29:29.95:559,30,0	1/1:7,6:13:18.06:426,18,0	1/1:1,0:1:2.99:23,3,0
chr10	85720663	.	TCGC	T	3145.60	PASS	AC=24;AF=0.480;AN=50;BaseQRankSum=8.333;DP=255;FS=13.434;HRun=0;HaplotypeScore=44.2031;InbreedingCoeff=0.7337;MQ=61.99;MQ0=0;MQRankSum=-0.147;QD=23.30;ReadPosRankSum=0.846;VQSLOD=2.0441;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,7:12:16.94:260,17,0	1/1:1,2:3:5.81:87,6,0	0/0:4,0:4:3.01:0,3,62	./.	0/0:4,0:4:3.01:0,3,61	./.	0/0:32,0:32:78.27:0,78,1601	1/1:4,3:7:6.01:69,6,0	0/0:3,0:3:6.02:0,6,123	1/1:2,4:6:5.93:60,6,0	./.	0/0:8,0:8:18.06:0,18,369	0/0:6,0:6:14.98:0,15,259	0/0:9,0:9:15.52:0,16,293	0/0:6,0:6:15.05:0,15,308	0/0:1,0:1:3.01:0,3,61	1/1:4,16:20:42.14:611,42,0	1/1:3,20:23:51.17:742,51,0	1/1:5,6:11:13.26:194,13,0	1/1:2,2:4:3.01:44,3,0	1/1:13,19:32:48.16:698,48,0	0/0:1,0:1:3.01:0,3,62	0/0:2,0:2:3.01:0,3,51	0/0:39,0:39:87.30:0,87,1749	0/0:3,0:3:6.02:0,6,123	1/1:2,4:6:12.04:174,12,0	1/1:2,4:6:15.05:218,15,0	1/1:1,4:5:12.04:175,12,0
chr10	85722878	.	GT	G	1179.89	PASS	AB=0.787;AC=26;AF=0.464;AN=56;BaseQRankSum=5.011;DP=463;FS=9.314;HRun=16;HaplotypeScore=59.0717;InbreedingCoeff=0.4443;MQ=72.08;MQ0=3;MQRankSum=-1.718;QD=4.47;ReadPosRankSum=4.138;VQSLOD=0.6695;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:55:30.44:127,30,0	1/1:1,1:4:4.92:23,5,0	0/0:25,0:13:9.58:0,10,47	0/0:17,0:13:7.51:0,8,48	0/0:10,2:16:2.65:0,3,100	0/0:15,2:18:2.69:0,3,216	0/1:5,1:8:0.38:0,0,80	1/1:15,17:34:8.34:249,8,0	0/0:12,1:13:2.92:0,3,127	1/1:6,0:11:10.14:29,10,0	0/1:2,0:7:12.11:12,0,12	0/0:14,1:19:5.63:0,6,131	0/0:9,0:11:26.54:0,27,188	0/0:15,0:15:22.62:0,23,186	0/0:13,0:18:23.61:0,24,170	0/0:19,0:19:12.56:0,13,195	1/1:3,5:21:41.15:166,41,0	1/1:9,11:21:11.93:178,12,0	1/1:11,8:19:26.24:156,26,0	1/1:6,1:7:2.79:18,3,0	1/1:10,9:22:35.35:197,35,0	0/1:4,1:6:9.96:10,0,51	0/1:9,1:10:6.12:6,0,54	0/0:13,0:14:28.36:0,28,217	0/0:13,1:14:7.73:0,8,152	0/1:14,2:17:9.45:9,0,50	0/1:5,7:12:3.03:89,0,3	1/1:3,6:10:0.66:92,1,0
chr10	85723041	.	C	CATAT	3177.42	PASS	AB=0.969;AC=14;AF=0.280;AN=50;BaseQRankSum=-7.949;DP=272;FS=10.371;HRun=0;HaplotypeScore=54.5916;InbreedingCoeff=0.6406;MQ=63.26;MQ0=1;MQRankSum=-1.289;QD=27.87;ReadPosRankSum=-5.392;VQSLOD=0.5870;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:24.81:25,0,239	0/0:3,0:3:2.80:0,3,13	./.	0/1:14,0:6:0.09:0,0,7	0/0:3,0:3:9.03:0,9,156	0/0:15,0:15:39.10:0,39,604	0/0:4,0:4:6:0,6,76	1/1:7,29:39:85.99:1779,86,0	0/0:8,0:8:9.02:0,9,124	0/0:7,0:7:11.86:0,12,82	0/0:7,0:7:5.04:0,5,94	0/0:4,0:4:9.02:0,9,129	0/0:9,0:9:21.04:0,21,311	0/0:6,0:6:15.04:0,15,222	0/0:8,0:8:18.06:0,18,307	0/0:5,0:5:3.01:0,3,48	0/0:25,0:25:21.99:0,22,476	0/0:21,0:21:54.14:0,54,871	1/1:1,8:10:23.86:414,24,0	./.	1/1:1,3:4:3.01:76,3,0	0/0:6,0:6:6:0,6,76	0/0:7,0:7:9.03:0,9,152	./.	0/0:8,0:8:24.08:0,24,417	1/1:4,4:9:11.96:217,12,0	1/1:0,5:5:12.04:304,12,0	1/1:1,9:10:21.07:527,21,0
chr10	85724201	.	C	CCCAG	7767.35	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-10.107;DP=596;FS=0.838;HRun=0;HaplotypeScore=104.4413;InbreedingCoeff=0.8814;MQ=81.94;MQ0=0;MQRankSum=-6.366;QD=65.27;ReadPosRankSum=0.528;VQSLOD=7.0216;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1925	0/0:2,0:2:3.01:0,3,56	0/0:18,0:18:51.16:0,51,873	0/0:18,0:18:39.11:0,39,649	0/0:9,0:9:27.09:0,27,488	0/0:18,0:18:51.17:0,51,948	1/1:12,24:36:84.24:2109,84,0	0/0:26,0:26:66.23:0,66,1188	0/0:23,0:23:69.24:0,69,1286	0/0:30,0:30:87.24:0,87,1553	0/0:9,0:9:27.09:0,27,502	1/1:5,29:34:96.27:2428,96,0	1/1:2,21:24:63.22:1650,63,0	1/1:6,19:25:60.21:1581,60,0	0/0:30,0:30:84.27:0,84,1529	0/0:18,0:18:48.16:0,48,878	0/0:33,0:33:99:0,99,1785	0/0:25,0:25:66.23:0,66,1217	0/0:20,0:20:51.17:0,51,907	0/0:13,0:13:33.11:0,33,601	0/0:54,0:53:99:0,156,2810	0/0:14,0:14:39.11:0,39,671	0/0:8,0:8:18.06:0,18,327	0/0:28,0:28:81.25:0,81,1449	0/0:2,0:2:6.02:0,6,98	0/0:25,0:25:69.24:0,69,1280	0/0:17,0:17:48.16:0,48,896	0/0:2,0:2:3.01:0,3,56
chr10	85724297	.	C	CGT	2999.54	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-8.684;DP=458;FS=37.882;HRun=0;HaplotypeScore=55.6677;InbreedingCoeff=0.8594;MQ=93.07;MQ0=0;MQRankSum=-6.015;QD=38.46;ReadPosRankSum=3.180;VQSLOD=2.0746;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,29:35:84.29:1447,84,0	1/1:1,2:3:9.03:153,9,0	0/0:17,0:17:45.14:0,45,583	0/0:23,0:23:51.13:0,51,636	0/0:1,0:1:3.01:0,3,40	0/0:12,0:12:30.10:0,30,392	0/0:24,0:24:69.23:0,69,918	0/0:25,0:25:60.20:0,60,793	0/0:14,0:14:36.12:0,36,479	1/1:4,8:12:27.07:419,27,0	1/1:2,1:3:3.01:52,3,0	0/0:16,0:16:39.13:0,39,514	0/0:13,0:13:33.11:0,33,437	0/0:17,0:17:42.14:0,42,559	0/0:18,0:18:42.14:0,42,559	0/0:15,0:15:42.14:0,42,556	1/1:0,25:25:63.22:1091,63,0	0/0:30,1:31:32.33:0,32,1026	0/0:8,0:8:24.04:0,24,284	0/0:5,0:5:15.05:0,15,199	0/0:52,0:52:99:0,138,1815	0/0:8,0:8:21.07:0,21,278	0/0:2,0:2:3.01:0,3,40	0/0:31,0:31:90.30:0,90,1197	0/0:6,0:6:18.06:0,18,239	0/0:14,0:14:36.12:0,36,477	0/0:21,0:21:60.20:0,60,798	0/0:7,0:7:21.07:0,21,275
chr10	85724438	.	GC	G	480.09	PASS	AB=0.923;AC=11;AF=0.196;AN=56;BaseQRankSum=1.067;DP=212;FS=4.902;HRun=8;HaplotypeScore=28.0019;InbreedingCoeff=0.5842;MQ=81.79;MQ0=1;MQRankSum=-1.166;QD=7.50;ReadPosRankSum=0.142;VQSLOD=-0.2689;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:21:16.07:221,16,0	1/1:1,2:3:3:29,3,0	0/1:10,1:11:8.37:8,0,83	0/0:8,0:8:11.99:0,12,128	0/0:5,0:5:12.03:0,12,137	0/0:4,0:4:9.02:0,9,97	0/0:3,0:17:25.84:0,26,131	0/0:9,0:9:12.04:0,12,145	0/0:6,0:6:12.04:0,12,145	1/1:4,6:10:15.02:145,15,0	1/1:0,1:1:3:29,3,0	0/0:2,0:7:5.75:0,6,29	0/0:1,0:4:2.84:0,3,15	0/0:2,0:9:11.66:0,12,82	0/0:6,0:6:15.04:0,15,171	0/0:11,0:11:24.07:0,24,289	1/1:4,13:17:21.03:202,21,0	0/0:9,0:9:24.07:0,24,284	0/0:6,0:6:12.04:0,12,145	0/0:4,0:4:6.02:0,6,72	0/0:15,0:15:39.12:0,39,471	0/0:5,0:5:6.01:0,6,61	0/0:3,0:3:6.02:0,6,72	0/0:7,0:7:12.04:0,12,145	0/0:3,0:3:9.01:0,9,95	0/0:4,0:4:6.02:0,6,72	0/0:4,0:4:9.02:0,9,97	0/0:2,0:2:3.01:0,3,36
chr10	85724690	.	A	ACACACACT	8428.31	PASS	AB=0.748;AC=30;AF=0.556;AN=54;BaseQRankSum=-0.582;DP=693;FS=0.782;HRun=0;HaplotypeScore=152.7724;InbreedingCoeff=0.8294;MQ=70.65;MQ0=6;MQRankSum=-3.418;QD=19.60;ReadPosRankSum=-2.485;VQSLOD=4.1026;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,2:34:24.08:574,24,0	1/1:0,0:2:6.02:142,6,0	0/0:48,0:30:73.15:0,73,796	0/0:27,0:15:28.81:0,29,269	0/0:10,0:10:30.07:0,30,725	0/0:20,0:20:46.93:0,47,1154	1/1:0,22:32:20.20:749,20,0	1/1:0,0:24:65.16:643,65,0	0/0:26,0:26:75.06:0,75,1317	1/1:1,0:10:27.05:467,27,0	./.	1/1:2,25:42:51.65:1859,52,0	1/1:1,15:25:30.99:874,31,0	1/1:2,11:21:18.27:518,18,0	0/0:14,0:14:42.12:0,42,1128	0/0:15,0:15:44.80:0,45,1124	1/1:2,0:29:23.35:476,23,0	0/1:41,0:42:99:126,0,1187	1/1:19,0:18:21.67:346,22,0	0/1:1,0:13:45.37:46,0,45	1/1:4,0:85:33.27:435,33,0	0/0:13,0:13:28.87:0,29,578	0/0:8,0:8:18.05:0,18,436	0/0:55,0:54:99:0,144,3060	0/0:16,0:16:45.07:0,45,1003	1/1:1,0:23:57.91:615,58,0	1/1:1,0:21:31.05:395,31,0	1/1:4,0:6:17.90:163,18,0
chr10	85726894	.	TGGG	T	5575.75	PASS	AB=0.929;AC=27;AF=0.482;AN=56;BaseQRankSum=-6.837;DP=446;FS=16.030;HRun=12;HaplotypeScore=84.3031;InbreedingCoeff=0.8554;MQ=80.60;MQ0=3;MQRankSum=-1.964;QD=20.81;ReadPosRankSum=6.355;VQSLOD=1.6661;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,20:30:54.11:681,54,0	1/1:4,6:10:5.79:76,6,0	0/0:25,0:20:26.77:0,27,224	0/1:12,0:12:22.25:22,0,30	0/0:4,0:9:14.45:0,14,97	0/0:6,0:9:13.68:0,14,99	0/0:16,0:19:34.25:0,34,402	1/1:9,12:21:29.79:280,30,0	0/0:4,0:9:17.94:0,18,138	1/1:4,11:15:30.53:379,31,0	1/1:4,4:8:5.99:62,6,0	0/0:13,0:16:13.68:0,14,98	0/0:2,0:6:14.95:0,15,117	0/0:9,0:16:20.69:0,21,171	0/0:6,0:14:20.72:0,21,166	0/0:7,0:15:28.18:0,28,235	1/1:4,20:24:38.69:491,39,0	1/1:5,24:30:65.54:804,66,0	1/1:6,8:14:24.02:286,24,0	1/1:6,11:17:32.98:373,33,0	1/1:13,17:33:59.95:697,60,0	0/0:1,0:3:5.99:0,6,53	0/0:4,0:5:7.24:0,7,84	0/0:10,0:20:25.16:0,25,188	0/0:9,0:11:14.40:0,14,97	1/1:7,20:27:60.13:744,60,0	1/1:2,17:19:41.80:493,42,0	1/1:2,5:7:15:190,15,0
chr10	85727685	.	T	TCC	2800.90	PASS	AB=0.638;AC=32;AF=0.571;AN=56;BaseQRankSum=-5.044;DP=454;FS=1.059;HRun=9;HaplotypeScore=63.8452;InbreedingCoeff=0.8014;MQ=73.02;MQ0=0;MQRankSum=-3.762;QD=12.39;ReadPosRankSum=-1.918;VQSLOD=0.6445;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,10:24:14.54:193,15,0	1/1:3,2:5:3.01:46,3,0	0/0:20,0:18:23.79:0,24,285	0/0:18,0:18:38.56:0,39,328	0/0:19,0:20:44.77:0,45,436	0/0:21,0:21:42.07:0,42,447	1/1:5,18:25:35.66:496,36,0	1/1:10,4:14:9.03:137,9,0	0/0:20,0:20:45.09:0,45,479	1/1:5,3:8:9.03:139,9,0	1/1:5,1:6:8.99:98,9,0	1/1:7,10:19:6.02:75,6,0	1/1:11,0:11:8.98:74,9,0	0/1:7,0:13:0.01:1,0,0	0/0:27,0:27:72.10:0,72,735	0/0:19,0:20:47.78:0,48,472	1/1:0,14:16:29.59:424,30,0	1/1:3,13:18:23.05:294,23,0	1/1:5,8:13:24.05:323,24,0	1/1:4,7:12:17.50:213,18,0	0/1:4,2:13:17.89:96,0,18	0/0:15,0:15:30.03:0,30,319	0/0:18,0:18:26.98:0,27,279	0/0:28,0:30:69:0,69,779	0/0:18,0:18:45.11:0,45,477	1/1:12,0:13:19.49:148,19,0	1/1:2,11:13:15.05:231,15,0	1/1:2,0:2:2.99:24,3,0
chr10	85728302	.	G	GT	1902.99	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-7.578;DP=489;FS=27.252;HRun=6;HaplotypeScore=58.6050;InbreedingCoeff=0.9882;MQ=73.49;MQ0=0;MQRankSum=-0.472;QD=27.99;ReadPosRankSum=1.475;VQSLOD=1.8154;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:45.02:512,45,0	1/1:0,8:8:21.07:264,21,0	0/0:26,0:22:42.98:0,43,499	0/0:14,0:13:27.43:0,27,241	0/0:21,0:21:57.13:0,57,582	0/0:21,0:21:54.12:0,54,549	0/0:20,0:20:39.08:0,39,397	0/0:25,0:25:53.98:0,54,549	0/0:18,0:18:42.07:0,42,420	1/1:2,11:13:36.11:445,36,0	1/1:2,13:15:33.11:415,33,0	0/0:13,0:13:36.08:0,36,367	0/0:17,0:17:51.12:0,51,520	0/0:22,0:22:63.14:0,63,641	0/0:21,0:21:54.07:0,54,551	0/0:20,0:20:57.12:0,57,579	1/1:2,12:13:36.10:441,36,0	0/0:20,0:20:57.13:0,57,581	0/0:15,0:15:42.09:0,42,429	0/0:17,0:17:39.08:0,39,398	0/0:12,0:12:33.05:0,33,328	0/0:13,0:13:39.09:0,39,396	0/0:14,0:14:36.08:0,36,367	0/0:17,0:17:45.10:0,45,458	0/0:17,0:17:36.08:0,36,366	0/0:18,1:19:10.36:0,10,421	0/0:27,0:27:63.10:0,63,632	0/0:11,0:11:33.08:0,33,337
chr10	85728529	.	AAAAGAAAG	A	5744.40	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=11.312;DP=623;FS=1.340;HRun=0;HaplotypeScore=161.2051;InbreedingCoeff=0.5773;MQ=52.41;MQ0=11;MQRankSum=-6.887;QD=22.01;ReadPosRankSum=-0.118;VQSLOD=4.5778;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:88.31:88,0,167	0/1:6,0:6:28.02:43,0,28	0/0:50,0:10:14.63:0,15,226	0/0:47,0:14:12.50:0,12,212	0/0:23,0:22:60.16:0,60,2054	0/0:21,0:21:45.15:0,45,1664	0/0:14,0:14:42.13:0,42,1450	1/1:11,19:30:57.16:960,57,0	0/0:25,0:25:63.19:0,63,2089	0/1:22,0:22:99:114,0,185	0/1:14,0:14:14.96:112,0,15	0/0:17,0:17:42.13:0,42,1425	0/0:17,0:17:42.14:0,42,1359	0/0:17,0:17:42.14:0,42,1588	0/0:29,0:29:75.24:0,75,2623	0/0:16,0:16:39.13:0,39,1472	0/1:32,0:32:96.99:137,0,97	1/1:18,0:19:6.13:167,6,0	1/1:11,6:17:27.08:604,27,0	1/1:5,13:18:33.07:634,33,0	1/1:1,12:13:6.02:135,6,0	0/0:16,0:16:39.12:0,39,1488	0/0:26,0:26:63.15:0,63,2134	0/0:16,0:16:36.12:0,36,1328	0/0:27,0:27:66.22:0,66,2265	1/1:4,22:26:63.19:1423,63,0	1/1:6,20:26:41.96:1037,42,0	1/1:0,6:6:12.04:290,12,0
chr10	85728549	.	GAAA	G	908.49	PASS	AB=0.966;AC=8;AF=0.143;AN=56;BaseQRankSum=10.282;DP=604;FS=0.000;HRun=3;HaplotypeScore=125.4953;InbreedingCoeff=-0.0689;MQ=54.59;MQ0=5;MQRankSum=-4.412;QD=6.40;ReadPosRankSum=4.091;VQSLOD=-0.1930;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:38.06:0,38,445	0/0:7,0:7:11.81:0,12,113	0/0:26,0:9:25.54:0,26,381	0/0:34,0:11:17.07:0,17,322	0/0:29,0:29:87.27:0,87,1765	0/0:18,0:18:54.18:0,54,1215	0/0:18,0:18:54.17:0,54,1148	0/1:25,0:24:69.31:69,0,239	0/0:26,0:26:78.25:0,78,1658	0/0:27,0:27:46.80:0,47,479	0/0:16,0:16:26.15:0,26,222	0/0:18,0:18:54.17:0,54,1130	0/0:18,0:18:54.17:0,54,1097	0/0:16,0:16:48.16:0,48,1117	0/0:31,0:31:93.16:0,93,1947	0/0:21,0:21:63.20:0,63,1256	0/0:34,0:34:43.70:0,44,331	0/1:13,8:21:2.33:372,0,2	0/1:12,0:11:54:92,0,54	0/1:14,0:14:48.03:83,0,48	0/1:14,0:14:6.77:7,0,70	0/0:16,0:16:48.16:0,48,1056	0/0:27,0:27:78.20:0,78,1526	0/0:17,0:17:51.17:0,51,1098	0/0:28,0:28:78.27:0,78,1703	0/1:23,0:23:74.18:221,0,74	0/1:23,0:23:55.33:169,0,55	0/1:10,0:10:28.91:29,0,136
chr10	85728553	.	GA	G	38.33	PASS	AB=0.908;AC=5;AF=0.089;AN=56;BaseQRankSum=9.314;DP=612;FS=2.269;HRun=3;HaplotypeScore=111.8858;InbreedingCoeff=0.1185;MQ=56.91;MQ0=3;MQRankSum=-7.390;QD=0.49;ReadPosRankSum=5.080;VQSLOD=-0.1271;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:2.29:0,2,105	1/1:7,0:7:1.39:5,1,0	0/0:24,0:9:19.84:0,20,239	0/0:33,0:14:23.43:0,23,287	0/0:29,0:29:84.28:0,84,1192	0/0:21,0:21:63.19:0,63,876	0/0:19,0:19:57.18:0,57,793	0/0:28,0:27:65.30:0,65,624	0/0:27,0:27:78.26:0,78,1106	0/0:27,0:27:0.69:0,1,100	0/1:16,0:16:2.97:3,0,51	0/0:17,0:17:51.13:0,51,704	0/0:18,0:18:54.15:0,54,730	0/0:17,0:17:48.15:0,48,669	0/0:29,0:29:78.23:0,78,1094	0/0:26,0:26:78.26:0,78,1098	0/1:34,0:34:12.01:12,0,33	0/1:13,8:21:73.98:109,0,74	0/0:12,0:11:11.63:0,12,121	0/0:14,0:14:17.83:0,18,133	0/0:14,0:14:9.46:0,9,103	0/0:16,0:16:45.15:0,45,641	0/0:23,0:23:69.23:0,69,981	0/0:18,0:18:54.17:0,54,748	0/0:29,0:29:81.25:0,81,1119	0/0:24,0:24:28.64:0,29,224	0/0:25,0:25:25.11:0,25,234	0/0:10,0:10:16.41:0,16,186
chr10	85728554	.	AAAGGAAGGAAGG	A	4418.11	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.159;DP=614;FS=6.538;HRun=0;HaplotypeScore=212.6609;InbreedingCoeff=0.9612;MQ=57.08;MQ0=3;MQRankSum=-5.257;QD=38.76;ReadPosRankSum=1.022;VQSLOD=3.9754;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:33:24.08:751,24,0	1/1:1,6:7:9.03:330,9,0	0/0:23,0:8:18.04:0,18,578	0/0:33,0:14:8.57:0,9,445	0/0:31,0:31:90.31:0,90,3973	0/0:22,0:22:66.23:0,66,3080	0/0:20,0:20:60.21:0,60,2746	0/0:29,0:28:75.23:0,75,1656	0/0:27,0:27:81.28:0,81,3711	1/1:2,25:27:54.63:1434,55,0	1/1:0,16:16:27.09:870,27,0	0/0:17,0:17:48.16:0,48,2468	0/0:18,0:18:51.17:0,51,2283	0/0:16,0:16:45.15:0,45,2297	0/0:30,0:30:81.28:0,81,4110	0/0:28,0:28:84.29:0,84,3500	1/1:4,27:31:30.10:1033,30,0	0/0:21,0:21:54.19:0,54,1816	0/0:12,0:11:33.11:0,33,651	0/0:14,0:14:27.08:0,27,408	0/0:14,0:14:12.04:0,12,263	0/0:15,0:15:45.15:0,45,2429	0/0:23,0:23:69.24:0,69,3341	0/0:18,0:18:51.13:0,51,2482	0/0:29,0:29:75.26:0,75,3472	0/0:25,0:25:72.21:0,72,1296	0/0:25,0:25:57.02:0,57,907	0/0:10,0:10:24.08:0,24,487
chr10	85728928	.	A	AAAAGAAAGAAAG	4622.80	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=8.256;DP=651;FS=2.655;HRun=0;HaplotypeScore=210.1746;InbreedingCoeff=0.8804;MQ=60.29;MQ0=6;MQRankSum=-9.873;QD=19.34;ReadPosRankSum=-3.190;VQSLOD=3.1062;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:22:26.96:274,27,0	1/1:6,0:6:3.01:36,3,0	0/0:35,0:19:5.12:0,5,59	0/1:24,0:18:0.40:0,0,133	0/0:20,0:20:36.11:0,36,1020	0/0:13,0:13:27.05:0,27,658	1/1:23,0:21:42.11:838,42,0	0/0:27,0:26:30.05:0,30,416	0/0:27,0:27:60.14:0,60,1480	1/1:24,0:24:36.01:431,36,0	1/1:19,0:19:34.50:485,35,0	1/1:8,12:27:6.02:353,6,0	1/1:6,14:23:11.82:706,12,0	1/1:7,17:27:9.03:461,9,0	0/0:36,0:36:90.19:0,90,2312	0/0:26,0:26:60.15:0,60,1367	1/1:23,0:24:11.90:323,12,0	1/1:19,0:19:44.91:714,45,0	0/0:18,0:17:27.02:0,27,388	0/0:15,0:15:45.04:0,45,1229	0/0:28,0:28:63.20:0,63,1756	0/0:14,0:14:33.09:0,33,757	0/0:15,0:15:33.11:0,33,959	0/0:45,0:45:84:0,84,2474	0/0:23,0:23:56.51:0,57,1443	0/0:22,0:22:33.08:0,33,728	0/0:38,0:38:81.19:0,81,2019	0/0:10,0:10:24.08:0,24,564
chr10	85729164	.	A	AAAG	251.48	PASS	AB=0.950;AC=6;AF=0.107;AN=56;BaseQRankSum=5.549;DP=452;FS=7.441;HRun=0;HaplotypeScore=88.8968;InbreedingCoeff=0.2597;MQ=58.65;MQ0=6;MQRankSum=-5.500;QD=4.26;ReadPosRankSum=-1.421;VQSLOD=0.7088;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:22:38.01:0,38,549	0/1:5,0:6:18.49:18,0,51	0/0:21,0:9:21.06:0,21,320	0/0:18,0:9:14.75:0,15,185	0/0:27,0:27:69.22:0,69,1140	0/0:14,0:14:42.14:0,42,695	0/0:11,0:8:21.06:0,21,331	0/0:39,0:35:81.49:0,81,1180	0/0:19,0:19:51.17:0,51,864	0/0:13,0:13:32.09:0,32,432	0/0:19,0:19:44.82:0,45,698	0/0:11,0:10:22.30:0,22,316	0/1:8,0:6:16.64:17,0,202	0/0:7,0:7:21.03:0,21,311	0/0:19,0:19:54.14:0,54,862	0/0:31,0:31:84.25:0,84,1329	0/1:15,0:15:3.98:4,0,290	1/1:5,8:12:18.27:319,18,0	0/0:18,0:16:39.52:0,40,554	0/1:16,0:16:16.67:17,0,456	0/0:5,0:5:9.92:0,10,155	0/0:7,0:7:15.05:0,15,254	0/0:12,0:12:32.89:0,33,482	0/0:13,0:13:27.39:0,27,460	0/0:19,0:19:57.16:0,57,899	0/0:23,0:22:47.94:0,48,614	0/0:17,0:14:35.92:0,36,516	0/0:8,0:8:17.89:0,18,293
chr10	85729333	.	CAGTGGTAGAACGCTTGCCTAGCA	C	4148.28	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=7.791;DP=468;FS=0.830;HRun=0;HaplotypeScore=256.4230;InbreedingCoeff=0.9494;MQ=53.88;MQ0=15;MQRankSum=-7.233;QD=115.23;ReadPosRankSum=3.952;VQSLOD=2.9990;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:78.27:0,78,6913	0/0:2,0:2:6.02:0,6,361	./.	0/0:12,0:5:12.51:0,13,498	0/0:21,0:21:57.19:0,57,5142	0/0:13,0:13:36.12:0,36,3659	1/1:2,8:10:15.05:944,15,0	0/0:30,0:27:63.21:0,63,4619	0/0:18,0:18:45.15:0,45,4619	0/0:12,0:10:30.10:0,30,2595	0/0:13,0:12:30.10:0,30,2606	1/1:2,8:9:18.06:1132,18,0	1/1:3,5:8:15.05:944,15,0	1/1:1,7:8:18.06:1129,18,0	0/0:21,0:21:60.21:0,60,6538	0/0:21,0:21:63.22:0,63,6483	0/0:20,0:19:45.15:0,45,3848	0/0:28,0:28:78.27:0,78,7143	0/0:14,0:12:27.08:0,27,2031	0/0:17,0:15:45.14:0,45,3603	0/0:19,0:19:51.16:0,51,4446	0/0:12,0:12:36.10:0,36,3367	0/0:24,0:24:63.22:0,63,5451	0/0:31,0:31:93.32:0,93,8338	0/0:11,0:11:30.09:0,30,2448	0/0:24,0:24:69.24:0,69,7329	0/0:16,0:14:36.12:0,36,3772	0/0:12,0:11:36.12:0,36,2891
chr10	85729403	.	G	GAA	3655.86	PASS	AB=0.555;AC=21;AF=0.375;AN=56;BaseQRankSum=0.090;DP=579;FS=3.380;HRun=11;HaplotypeScore=87.8548;InbreedingCoeff=0.7901;MQ=56.57;MQ0=24;MQRankSum=-0.753;QD=16.32;ReadPosRankSum=-1.071;VQSLOD=2.5318;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,3:31:46.41:235,46,0	0/1:1,0:4:9.11:9,0,21	0/0:38,0:11:7.54:0,8,87	0/0:43,0:13:7.16:0,7,114	0/0:20,0:21:53.79:0,54,506	0/0:20,0:20:47.98:0,48,458	0/0:10,0:11:23.82:0,24,215	1/1:7,21:30:65.72:808,66,0	0/0:20,0:21:51:0,51,481	1/1:7,1:20:12.03:142,12,0	0/1:2,0:13:8.63:39,0,9	0/0:14,0:15:32.78:0,33,303	0/0:13,0:14:29.41:0,29,268	0/0:15,0:16:38.72:0,39,348	0/0:18,0:18:38.96:0,39,369	0/0:25,0:25:63.06:0,63,606	1/1:5,0:26:21.61:131,22,0	0/0:23,0:25:62.54:0,63,576	1/1:5,13:19:47:603,47,0	1/1:2,10:11:23.98:280,24,0	1/1:4,5:9:21.89:263,22,0	0/0:13,0:14:26.73:0,27,244	0/0:26,0:25:66.09:0,66,634	0/0:30,0:30:81.09:0,81,780	0/0:16,0:16:42.05:0,42,401	1/1:8,16:25:45.51:598,46,0	0/1:4,16:19:1.98:287,0,2	1/1:1,6:6:18.06:260,18,0
chr10	85729659	.	TATACAC	T	610.73	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=0.746;DP=502;FS=0.745;HRun=0;HaplotypeScore=123.4050;InbreedingCoeff=0.7261;MQ=61.28;MQ0=11;MQRankSum=-1.980;QD=6.23;ReadPosRankSum=1.201;VQSLOD=2.3024;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:26:2.84:14,3,0	1/1:0,7:7:3.48:39,3,0	0/0:30,0:18:28.72:0,29,349	0/0:27,0:15:43.10:0,43,358	0/0:16,0:15:24.04:0,24,417	0/0:20,0:19:39.08:0,39,774	0/0:25,0:25:50.99:0,51,557	0/0:20,0:18:50.84:0,51,483	0/0:19,0:18:46.89:0,47,737	1/1:11,2:12:28.57:358,29,0	1/1:6,0:6:11.99:145,12,0	0/0:17,0:17:20.70:0,21,241	0/0:17,0:17:41.91:0,42,584	0/0:18,0:18:44.64:0,45,505	0/0:17,0:17:45.09:0,45,1063	0/0:13,0:13:36.03:0,36,615	1/1:2,31:33:6.49:135,6,0	0/1:12,0:12:73.63:74,0,129	0/0:10,0:10:29.80:0,30,285	0/0:6,0:6:7.98:0,8,91	0/0:40,0:39:57.03:0,57,577	0/0:9,0:8:15.01:0,15,182	0/0:4,0:4:6.02:0,6,125	0/0:30,0:29:78.16:0,78,1729	0/0:11,0:11:11.96:0,12,272	0/0:19,0:18:31.71:0,32,536	0/0:23,0:23:56.78:0,57,581	0/0:12,0:12:20.82:0,21,191
chr10	85729661	.	TAC	T	380.51	PASS	AB=0.950;AC=23;AF=0.426;AN=54;BaseQRankSum=6.208;DP=511;FS=1.641;HRun=0;HaplotypeScore=99.1449;InbreedingCoeff=0.2421;MQ=58.43;MQ0=13;MQRankSum=1.764;QD=1.35;ReadPosRankSum=-1.713;VQSLOD=1.7105;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:2.99:0,3,24	1/1:7,0:7:0.47:1,0,0	1/1:29,0:16:0.89:2,1,0	./.	0/0:16,0:17:8.99:0,9,94	0/0:21,0:20:15.45:0,15,204	1/1:27,0:27:8.93:62,9,0	0/0:20,0:18:5.94:0,6,43	0/0:18,2:19:18.05:0,18,252	0/0:14,0:13:0.18:0,0,29	0/0:5,0:5:2.27:0,2,9	1/1:17,0:17:5.85:42,6,0	1/1:17,0:17:26.86:201,27,0	0/1:17,0:17:11.54:49,0,12	0/1:14,1:15:2.06:2,0,352	0/0:14,0:14:12.67:0,13,198	1/1:31,0:31:4.39:18,4,0	0/0:12,0:12:7.43:0,7,115	0/1:12,0:12:1.64:22,0,2	1/1:9,0:8:0.47:1,0,0	0/1:42,0:39:25.25:27,0,25	1/1:10,0:9:2.96:19,3,0	0/1:3,2:5:24.36:24,0,60	0/0:29,1:28:19.25:0,19,477	0/0:10,0:10:9.02:0,9,112	0/1:20,0:19:14.98:15,0,39	0/1:23,0:23:5.63:46,0,6	0/0:12,0:12:5.98:0,6,54
chr10	85729699	.	T	TAC	836.70	PASS	AB=0.828;AC=13;AF=0.232;AN=56;BaseQRankSum=2.975;DP=527;FS=0.000;HRun=0;HaplotypeScore=102.4905;InbreedingCoeff=0.3763;MQ=49.30;MQ0=20;MQRankSum=-3.515;QD=4.06;ReadPosRankSum=-1.285;VQSLOD=1.8273;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:14.85:0,15,179	0/0:6,0:6:3.48:0,3,37	0/0:5,0:1:3:0,3,25	0/0:16,0:2:6:0,6,53	0/0:11,0:10:10.27:0,10,108	0/0:21,0:22:31.95:0,32,298	0/1:25,0:25:0.13:0,0,14	1/1:29,0:25:42.11:501,42,0	0/0:15,0:14:32.18:0,32,276	0/0:23,0:18:27.68:0,28,296	0/0:3,0:2:3.01:0,3,36	0/0:22,0:22:5.14:0,5,22	0/0:16,0:16:24.20:0,24,101	0/0:12,0:11:7.87:0,8,32	0/0:15,0:15:30.07:0,30,336	0/0:9,0:9:17.94:0,18,207	0/0:40,0:40:46.39:0,46,547	0/1:14,0:14:8.87:9,0,51	1/1:13,0:10:2.41:71,2,0	0/1:4,9:11:0:0,0,0	1/1:31,36:63:5.49:119,5,0	0/0:11,0:10:15.04:0,15,175	0/0:12,0:11:25.59:0,26,274	0/0:33,0:34:56.14:0,56,720	0/0:15,0:15:24.06:0,24,277	0/1:19,0:18:14.71:152,0,15	1/1:9,1:15:3.14:86,3,0	0/1:2,9:11:29.93:42,0,30
chr10	85729925	.	AAAAGGGCCC	A	975.63	PASS	AB=0.989;AC=30;AF=0.556;AN=54;BaseQRankSum=-4.304;DP=332;FS=19.062;HRun=0;HaplotypeScore=75.4536;InbreedingCoeff=-0.0541;MQ=48.02;MQ0=33;MQRankSum=0.581;QD=5.51;ReadPosRankSum=0.352;VQSLOD=0.1360;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:6:12.65:24,0,13	1/1:6,1:7:8.77:169,9,0	0/0:62,0:6:14.98:0,15,272	0/0:77,0:14:28.36:0,28,444	0/1:12,0:11:9.89:25,0,10	0/0:10,0:10:17.01:0,17,171	1/1:3,0:3:4.26:45,4,0	0/1:16,0:16:3.72:4,0,184	0/1:7,0:6:0.11:0,0,0	1/1:8,1:9:3.14:91,3,0	1/1:12,1:12:22.42:274,22,0	0/1:8,0:8:31.87:70,0,32	0/1:4,0:4:0.48:0,0,23	0/0:4,0:3:1.16:0,1,11	0/1:7,0:7:25.32:27,0,25	0/1:9,0:9:16.66:17,0,119	0/1:13,1:12:30.86:63,0,31	0/1:7,1:8:2.32:147,0,2	0/1:9,0:7:4.16:4,0,75	0/1:11,0:11:14.74:15,0,69	1/1:3,0:3:0.47:1,0,0	0/1:3,0:3:0:0,0,0	0/1:3,0:3:0:0,0,0	./.	0/1:9,0:6:22.40:22,0,50	0/1:6,0:6:15.31:15,0,45	1/1:2,0:2:4.54:26,5,0	1/1:8,0:6:10.73:81,11,0
chr10	85729926	.	AAAGGGCCC	A	1038.70	PASS	AB=0.996;AC=30;AF=0.556;AN=54;BaseQRankSum=-4.584;DP=325;FS=19.130;HRun=0;HaplotypeScore=69.6472;InbreedingCoeff=-0.0661;MQ=47.62;MQ0=34;MQRankSum=0.207;QD=6.18;ReadPosRankSum=0.192;VQSLOD=-0.5715;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:5:11.38:24,0,11	1/1:3,4:7:8.77:166,9,0	0/0:63,0:6:14.98:0,15,274	0/0:78,0:14:28.79:0,29,445	0/1:11,0:10:6.16:30,0,6	0/0:10,0:10:14.62:0,15,133	1/1:3,0:3:4.26:45,4,0	0/1:16,0:16:7.25:7,0,150	0/1:7,0:6:0.11:0,0,0	1/1:8,0:8:7.51:93,8,0	1/1:10,1:11:23.35:276,23,0	0/1:8,0:8:23.21:80,0,23	0/1:3,0:3:0.47:0,0,24	0/0:4,0:3:1.24:0,1,13	0/1:7,0:7:19.53:27,0,20	0/1:8,0:8:16.66:17,0,93	0/1:12,1:11:24.72:78,0,25	0/1:7,0:7:2.32:133,0,2	0/1:9,0:7:14.72:15,0,54	0/1:11,0:11:28.46:28,0,56	1/1:2,0:2:0.47:1,0,0	0/1:3,0:3:0:0,0,0	0/1:3,0:2:0:0,0,0	./.	0/1:9,0:6:32.53:33,0,38	0/1:6,0:6:15.38:15,0,30	1/1:2,0:2:4.54:26,5,0	1/1:9,0:6:10.79:91,11,0
chr10	85729942	.	A	ACC	444.64	PASS	AB=0.903;AC=12;AF=0.222;AN=54;BaseQRankSum=1.901;DP=499;FS=37.150;HRun=0;HaplotypeScore=74.3001;InbreedingCoeff=-0.0862;MQ=40.03;MQ0=47;MQRankSum=1.643;QD=2.07;ReadPosRankSum=-1.495;VQSLOD=-0.1011;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,3:17:99:138,0,157	1/1:5,0:5:5.23:35,5,0	0/1:85,0:7:0.16:0,0,105	0/0:100,0:18:9.99:0,10,289	0/0:18,0:17:21.25:0,21,387	0/0:16,0:15:39.13:0,39,534	0/1:9,0:9:41.49:41,0,71	0/0:30,0:28:73.42:0,73,877	0/0:6,0:4:9.03:0,9,111	0/1:13,4:16:88.21:131,0,88	0/1:10,1:11:37.35:40,0,37	0/1:7,1:10:15.97:16,0,113	0/1:7,0:7:43.03:43,0,65	0/0:7,0:5:8.33:0,8,99	0/0:9,0:9:18.06:0,18,236	0/0:9,0:8:18.06:0,18,243	0/1:22,3:21:61.73:62,0,114	0/1:13,1:13:69.22:74,0,69	0/0:22,0:21:56.39:0,56,735	0/1:13,0:13:3.40:3,0,214	0/0:4,0:2:5.51:0,6,48	./.	0/0:3,0:2:6.02:0,6,88	0/0:4,0:2:0:0,0,0	0/0:17,0:13:35.14:0,35,445	0/0:12,0:9:13.89:0,14,251	0/0:12,0:11:18.06:0,18,231	0/0:14,0:9:14.41:0,14,165
chr10	85729943	.	A	ACC	480.54	PASS	AB=0.915;AC=10;AF=0.179;AN=56;BaseQRankSum=1.607;DP=501;FS=29.497;HRun=0;HaplotypeScore=74.4199;InbreedingCoeff=-0.1540;MQ=38.54;MQ0=48;MQRankSum=1.468;QD=3.70;ReadPosRankSum=-1.246;VQSLOD=0.1986;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:65.36:65,0,180	0/1:5,0:5:0.66:21,0,1	0/0:86,0:8:0.41:0,0,88	0/0:99,0:17:15.20:0,15,249	0/0:17,0:16:11.56:0,12,404	0/0:16,0:15:42.06:0,42,538	0/1:6,2:9:62.73:72,0,63	0/0:31,0:29:74.07:0,74,923	0/0:6,0:4:9.03:0,9,112	0/1:16,2:16:99:128,0,125	0/1:10,0:10:38.34:49,0,38	0/1:12,0:11:26.18:26,0,124	0/1:4,2:7:61.03:61,0,67	0/0:8,0:6:11.73:0,12,103	0/0:9,0:9:18.06:0,18,236	0/0:9,0:8:18.06:0,18,243	0/1:23,2:21:54.82:55,0,171	0/1:12,2:13:34:128,0,34	0/0:22,0:21:38.93:0,39,710	0/1:13,0:13:12.86:13,0,212	0/0:4,0:2:5.99:0,6,61	0/0:2,0:2:2.84:0,3,14	0/0:3,0:2:6.02:0,6,89	0/0:4,0:2:0:0,0,0	0/0:17,0:13:36.07:0,36,458	0/0:12,0:9:2.30:0,2,263	0/0:12,0:11:18.06:0,18,243	0/0:14,0:9:14.67:0,15,149
chr10	85731758	.	G	GGT	2561.15	PASS	AB=0.905;AC=55;AF=0.982;AN=56;BaseQRankSum=1.222;DP=617;FS=0.000;HRun=0;HaplotypeScore=353.8812;InbreedingCoeff=-0.0013;MQ=70.58;MQ0=0;MQRankSum=-2.707;QD=4.15;ReadPosRankSum=2.095;VQSLOD=0.9230;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:40:33.55:92,34,0	1/1:3,0:3:5.48:16,5,0	1/1:21,4:25:34.04:399,34,0	0/1:17,2:19:14.99:136,0,15	1/1:12,0:12:8.01:25,8,0	1/1:16,0:16:17.57:48,18,0	1/1:35,0:35:45.66:124,46,0	1/1:35,0:35:44.78:108,45,0	1/1:24,0:24:17.93:75,18,0	1/1:26,0:27:45.19:148,45,0	1/1:11,0:11:9.38:27,9,0	1/1:28,0:28:38.10:114,38,0	1/1:24,0:24:31.78:97,32,0	1/1:27,0:27:38.40:107,38,0	1/1:31,0:31:42.23:126,42,0	1/1:24,0:24:34.58:94,35,0	1/1:24,0:22:19.13:51,19,0	1/1:19,0:19:24.88:59,25,0	1/1:21,0:21:25.54:76,26,0	1/1:11,0:11:13.11:60,13,0	1/1:27,0:27:13.64:39,14,0	1/1:13,0:13:16.30:61,16,0	1/1:13,0:14:20.50:103,21,0	1/1:23,0:23:16.44:64,16,0	1/1:11,0:11:17.84:62,18,0	1/1:34,0:34:52.07:147,52,0	1/1:29,0:29:46.03:162,46,0	1/1:10,0:10:12.44:31,12,0
chr10	85731761	.	GT	G	5540.65	PASS	AB=0.974;AC=46;AF=0.821;AN=56;BaseQRankSum=8.251;DP=593;FS=4.513;HRun=1;HaplotypeScore=316.2588;InbreedingCoeff=-0.2153;MQ=74.44;MQ0=0;MQRankSum=-4.610;QD=9.34;ReadPosRankSum=11.124;VQSLOD=1.5860;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:24.29:290,24,0	1/1:3,0:3:8.52:42,9,0	0/1:23,2:25:24.21:24,0,340	0/1:22,1:23:89.54:90,0,280	1/1:12,2:14:20.37:142,20,0	0/1:15,1:16:23.60:174,0,24	1/1:31,0:31:49.91:341,50,0	0/1:32,0:32:15.12:306,0,15	0/1:24,0:24:59.08:171,0,59	1/1:26,2:28:51.52:374,52,0	1/1:10,1:11:14.27:72,14,0	0/1:26,0:26:5.88:192,0,6	1/1:20,0:20:26.61:206,27,0	1/1:26,0:26:41.29:290,41,0	1/1:27,1:28:21.85:279,22,0	1/1:22,1:23:65.67:359,66,0	0/1:20,0:18:7.62:108,0,8	1/1:18,0:18:11.31:152,11,0	0/1:22,0:22:33.57:188,0,34	1/1:8,2:10:10.29:81,10,0	0/1:24,1:25:24.63:120,0,25	1/1:12,1:13:23.16:144,23,0	1/1:12,1:13:27.51:132,28,0	0/1:20,1:21:24.27:112,0,24	1/1:8,3:11:30.80:160,31,0	1/1:32,1:33:58.89:410,59,0	1/1:26,5:31:76.27:466,76,0	1/1:10,0:10:22.73:114,23,0
chr10	85733763	.	C	CGGAACATCAAACTCGAGAT	75939.98	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=2.670;DP=640;FS=30.193;HRun=0;HaplotypeScore=281.4332;InbreedingCoeff=0.9991;MQ=69.39;MQ0=1;MQRankSum=-18.275;QD=181.24;ReadPosRankSum=-0.273;VQSLOD=3.6840;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,12:32:69.24:5651,69,0	1/1:5,2:8:20.91:1677,21,0	0/0:16,0:15:39.11:0,39,1763	0/0:16,0:16:36.09:0,36,1532	0/0:19,0:19:39.13:0,39,1786	0/0:20,0:20:54.19:0,54,2447	1/1:21,7:31:81.28:6105,81,0	1/1:34,0:34:96.33:6797,96,0	0/0:23,0:23:63.22:0,63,3221	1/1:25,3:29:75.26:5563,75,0	1/1:10,4:14:36.12:2632,36,0	1/1:22,10:33:87.30:5980,87,0	1/1:15,9:27:66.23:5316,66,0	1/1:17,12:32:78.27:6294,78,0	0/0:22,0:22:57.18:0,57,2764	0/0:20,0:19:54.19:0,54,2732	1/1:13,8:22:48.16:3999,48,0	1/1:16,5:26:54.19:3685,54,0	1/1:12,0:12:27.08:1824,27,0	1/1:9,6:18:36.12:2853,36,0	1/1:23,5:30:60.21:4137,60,0	0/0:16,0:16:38.95:0,39,1492	0/0:20,0:20:48.16:0,48,2533	0/0:29,0:29:78.27:0,78,3941	0/0:20,0:20:45.11:0,45,1762	1/1:24,8:34:96.29:6733,96,0	1/1:14,9:25:60.20:4299,60,0	1/1:7,3:11:30.10:2394,30,0
chr10	85735492	.	CTGTGTGTGTGTG	C	291.59	PASS	AC=10;AF=0.385;AN=26;BaseQRankSum=1.743;DP=299;FS=6.422;HRun=0;HaplotypeScore=88.4081;InbreedingCoeff=0.4334;MQ=80.73;MQ0=19;MQRankSum=-2.457;QD=5.72;ReadPosRankSum=2.060;VQSLOD=1.0941;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:12:2.50:9,2,0	1/1:4,1:4:3.01:102,3,0	./.	./.	./.	./.	0/0:9,0:8:6.02:0,6,185	0/0:22,0:19:0.94:0,1,2	./.	0/0:9,0:8:0.47:0,0,1	1/1:2,3:5:2.45:101,2,0	./.	0/0:4,0:5:3.01:0,3,74	./.	./.	0/0:11,0:9:6.02:0,6,340	1/1:21,0:20:3.01:51,3,0	0/0:16,0:14:8.96:0,9,68	./.	./.	0/0:33,0:29:2.84:0,3,14	./.	./.	0/0:9,0:7:3.01:0,3,111	./.	./.	1/1:4,0:7:9.03:128,9,0	./.
chr10	85736036	.	G	GC	250.78	PASS	AB=1.000;AC=13;AF=0.271;AN=48;BaseQRankSum=2.060;DP=134;FS=7.671;HRun=7;HaplotypeScore=30.5299;InbreedingCoeff=0.5051;MQ=95.03;MQ0=0;MQRankSum=-2.082;QD=10.45;ReadPosRankSum=-0.621;VQSLOD=0.2342;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:21.03:0,21,199	./.	0/0:8,0:8:15.01:0,15,144	0/0:10,0:10:20.97:0,21,193	0/0:1,0:1:2.97:0,3,20	0/0:5,0:5:8.15:0,8,68	1/1:1,8:9:26.45:298,26,0	0/0:5,0:5:3:0,3,29	0/0:10,0:10:4.49:0,4,58	1/1:4,0:4:2.97:20,3,0	0/0:2,0:2:2.59:0,3,29	1/1:2,0:2:0.89:2,1,0	1/1:0,4:4:3:25,3,0	1/1:2,0:2:4.21:23,4,0	0/0:3,0:3:3.95:0,4,31	0/0:5,0:5:12.42:0,12,102	0/0:5,0:5:12.01:0,12,116	0/0:5,0:5:12.01:0,12,116	0/0:4,0:4:6.01:0,6,58	./.	0/0:23,0:23:45.07:0,45,433	0/0:1,0:1:3:0,3,29	./.	0/0:6,0:6:18.03:0,18,174	1/1:2,0:2:1.64:10,2,0	./.	0/0:3,0:3:2.88:0,3,29	0/1:1,0:1:0:0,0,0
chr10	85736716	.	GCACA	G	6444.30	PASS	AB=0.857;AC=33;AF=0.589;AN=56;BaseQRankSum=10.536;DP=678;FS=2.371;HRun=0;HaplotypeScore=147.2344;InbreedingCoeff=0.8671;MQ=58.16;MQ0=14;MQRankSum=-4.037;QD=18.95;ReadPosRankSum=1.413;VQSLOD=4.8991;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,19:42:44.74:698,45,0	1/1:2,8:10:18.06:286,18,0	0/0:49,0:25:9.03:0,9,165	0/0:59,0:30:16.07:0,16,431	0/0:11,0:12:20.81:0,21,437	0/0:25,0:26:59.94:0,60,1305	1/1:14,17:36:72.14:1049,72,0	0/1:20,0:24:32.95:109,0,33	0/0:31,0:31:66.23:0,66,1526	1/1:10,8:20:36.08:524,36,0	1/1:5,5:12:14.98:213,15,0	1/1:5,6:12:27.09:415,27,0	1/1:5,8:14:27.05:360,27,0	1/1:4,11:15:36.12:581,36,0	0/0:21,0:23:44.62:0,45,936	0/0:16,0:17:41.88:0,42,897	1/1:14,15:29:38.77:610,39,0	1/1:14,9:23:17.07:513,17,0	1/1:9,0:10:12.01:112,12,0	1/1:5,0:18:20.97:196,21,0	1/1:26,0:29:2.80:13,3,0	0/0:21,0:21:39.13:0,39,916	0/0:24,0:26:53.36:0,53,971	0/0:36,0:41:68.49:0,68,1492	0/0:29,0:31:71.68:0,72,1469	1/1:7,0:23:48.49:435,48,0	1/1:5,0:16:30.02:274,30,0	1/1:2,0:4:6.01:56,6,0
chr10	85736772	.	GCA	G	10044.69	PASS	AB=0.851;AC=36;AF=0.643;AN=56;BaseQRankSum=10.695;DP=697;FS=10.048;HRun=0;HaplotypeScore=140.7880;InbreedingCoeff=0.6840;MQ=53.80;MQ0=11;MQRankSum=3.449;QD=19.97;ReadPosRankSum=2.567;VQSLOD=5.1502;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,32:48:87.07:1016,87,0	1/1:6,6:13:23.74:245,24,0	0/0:32,1:15:21.01:0,21,270	0/0:23,0:14:17.92:0,18,224	0/0:16,1:17:5.78:0,6,556	0/1:21,2:23:18.21:18,0,690	1/1:10,19:30:41.96:484,42,0	1/1:6,14:21:44.96:510,45,0	0/0:23,0:23:54.14:0,54,832	1/1:8,24:32:69.21:832,69,0	1/1:3,11:15:35.90:396,36,0	1/1:4,23:28:75.17:875,75,0	1/1:3,12:15:36.02:434,36,0	1/1:7,19:27:60.01:702,60,0	0/1:28,2:30:3.18:3,0,913	0/0:24,0:23:45.80:0,46,828	1/1:12,27:40:68.94:796,69,0	0/1:9,11:21:27.82:287,0,28	1/1:6,6:12:23.90:258,24,0	1/1:7,15:22:44.85:476,45,0	1/1:5,24:30:69.89:795,70,0	0/1:18,2:20:42.09:42,0,355	0/0:20,0:21:13.35:0,13,676	0/0:34,0:34:66.21:0,66,1057	0/0:17,1:18:8.92:0,9,603	1/1:9,23:33:58.12:840,58,0	1/1:6,17:24:53.99:622,54,0	1/1:2,14:15:35.94:412,36,0
chr10	85736888	.	GCACA	G	6684.59	PASS	AB=0.759;AC=23;AF=0.411;AN=56;BaseQRankSum=1.980;DP=769;FS=1.150;HRun=0;HaplotypeScore=147.2600;InbreedingCoeff=0.7558;MQ=58.12;MQ0=6;MQRankSum=-0.812;QD=18.67;ReadPosRankSum=2.586;VQSLOD=4.3149;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,30:50:50.51:982,51,0	1/1:0,13:13:36.12:596,36,0	0/1:28,0:15:1.27:1,0,115	0/0:40,0:28:26.99:0,27,682	0/0:24,0:27:47.63:0,48,1049	0/0:19,0:19:36.12:0,36,829	1/1:9,19:29:41.86:674,42,0	0/1:25,1:44:31.53:32,0,393	0/0:32,0:34:84.02:0,84,1986	1/1:10,14:24:43.72:707,44,0	1/1:7,11:19:18.05:277,18,0	1/1:12,8:20:13.63:497,14,0	1/1:12,9:22:48.13:735,48,0	1/1:3,25:29:63.20:1000,63,0	0/0:35,0:37:85.97:0,86,1949	0/0:31,0:34:80.73:0,81,1780	1/1:8,28:36:12.83:757,13,0	1/1:7,15:22:9.60:380,10,0	0/0:8,0:15:19.53:0,20,116	0/1:6,2:22:46.28:46,0,177	0/0:16,1:39:26.58:0,27,293	0/0:25,0:29:59.71:0,60,1241	0/0:13,0:18:35.53:0,36,617	0/0:41,0:41:83.96:0,84,1956	0/0:21,0:21:48.15:0,48,1088	0/0:12,0:24:9.02:0,9,209	0/0:6,1:25:3.15:0,3,242	0/0:1,0:5:10.98:0,11,50
chr10	85736985	.	T	TGC	11086.20	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=6.644;DP=853;FS=1.690;HRun=0;HaplotypeScore=115.3801;InbreedingCoeff=0.9953;MQ=57.87;MQ0=15;MQRankSum=3.039;QD=31.58;ReadPosRankSum=1.377;VQSLOD=6.4964;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,117,1432	0/0:6,0:6:15.01:0,15,170	0/0:46,0:18:47.85:0,48,545	0/0:63,0:35:65.95:0,66,730	0/0:29,0:29:84.08:0,84,1052	0/0:25,0:25:56.98:0,57,694	1/1:7,29:36:42.65:829,43,0	1/1:8,33:41:99:1522,99,0	0/0:20,0:20:51.08:0,51,659	0/0:25,0:25:72.15:0,72,894	0/0:24,0:24:72.09:0,72,879	1/1:1,35:36:84.29:1433,84,0	1/1:6,18:24:48.16:802,48,0	1/1:8,10:18:39.09:613,39,0	0/0:41,0:41:99:0,111,1445	0/0:23,0:23:69.12:0,69,890	0/0:20,0:20:45.15:0,45,629	0/0:24,0:24:14.88:0,15,670	1/1:18,6:24:42.29:714,42,0	1/1:5,20:26:34.83:799,35,0	1/1:10,57:70:42.36:1707,42,0	0/0:30,0:30:72.66:0,73,968	0/0:25,0:25:66.18:0,66,870	0/0:35,0:35:90.27:0,90,1223	0/0:17,0:17:42.13:0,42,571	1/1:5,22:27:62.91:1001,63,0	1/1:12,15:25:49.63:1002,50,0	1/1:1,20:21:39.08:664,39,0
chr10	85737422	.	TTTG	T	2310.78	PASS	AB=0.782;AC=20;AF=0.357;AN=56;BaseQRankSum=6.841;DP=729;FS=3.596;HRun=0;HaplotypeScore=123.7807;InbreedingCoeff=0.8014;MQ=63.44;MQ0=1;MQRankSum=-2.665;QD=8.11;ReadPosRankSum=0.653;VQSLOD=3.0376;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:33:27.01:0,27,305	0/0:2,0:7:17.99:0,18,198	0/0:25,0:17:6.02:0,6,72	0/0:19,0:17:8.99:0,9,136	0/0:41,0:41:63.68:0,64,1154	0/0:32,0:32:51.12:0,51,837	1/1:13,0:23:11.90:83,12,0	0/1:32,7:39:30.22:125,0,30	0/0:34,1:35:26.37:0,26,1064	0/0:25,0:39:63.08:0,63,685	0/0:13,0:17:27.50:0,28,314	1/1:8,0:26:32.74:230,33,0	1/1:10,0:28:38.69:272,39,0	1/1:7,0:17:23.81:167,24,0	0/0:8,0:24:48.15:0,48,615	0/0:24,0:24:42.13:0,42,778	0/0:16,0:22:18.91:0,19,209	0/0:17,0:30:39.11:0,39,491	1/1:20,5:25:12.04:159,12,0	1/1:12,6:19:18.02:216,18,0	1/1:18,6:24:12.04:159,12,0	0/0:24,0:24:30.10:0,30,578	0/0:15,0:30:36.12:0,36,482	0/0:10,0:20:33.08:0,33,403	0/0:21,0:21:33.11:0,33,632	0/1:22,15:38:25.42:513,0,25	1/1:19,8:28:18.02:220,18,0	1/1:5,11:17:28.12:376,28,0
chr10	85738329	.	C	CA	18627.26	PASS	AB=0.743;AC=54;AF=0.964;AN=56;BaseQRankSum=-0.675;DP=713;FS=7.503;HRun=1;HaplotypeScore=265.5427;InbreedingCoeff=-0.0371;MQ=76.12;MQ0=0;MQRankSum=-6.001;QD=26.13;ReadPosRankSum=1.037;VQSLOD=3.6181;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,40:51:99:1159,111,0	1/1:3,10:13:38.87:416,39,0	0/1:11,10:21:99:387,0,122	0/1:16,5:21:99:176,0,128	1/1:5,12:17:47.85:575,48,0	1/1:5,12:17:50.57:502,51,0	1/1:7,21:28:76.78:605,77,0	1/1:7,35:42:99:1038,119,0	1/1:2,24:26:77.65:803,78,0	1/1:5,14:19:51.28:480,51,0	1/1:3,10:13:31.67:300,32,0	1/1:6,29:35:99:1077,104,0	1/1:8,21:29:76.01:747,76,0	1/1:6,25:31:85.38:857,85,0	1/1:5,36:41:99:1162,119,0	1/1:11,29:40:99:1137,113,0	1/1:5,13:18:53.97:626,54,0	1/1:2,14:16:43.84:474,44,0	1/1:4,9:13:33.07:393,33,0	1/1:6,21:27:68.22:598,68,0	1/1:12,22:34:80.21:843,80,0	1/1:6,14:20:53.34:452,53,0	1/1:2,17:19:44.41:413,44,0	1/1:9,25:33:77.41:946,77,0	1/1:0,12:12:35.83:394,36,0	1/1:4,20:24:68.64:572,69,0	1/1:1,38:39:99:1098,116,0	1/1:3,10:13:35.82:398,36,0
chr10	85738916	.	TA	T	2118.88	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.407;DP=539;FS=11.857;HRun=11;HaplotypeScore=64.3282;InbreedingCoeff=0.9128;MQ=70.65;MQ0=2;MQRankSum=0.016;QD=12.61;ReadPosRankSum=3.768;VQSLOD=2.2143;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:31:52.98:591,53,0	1/1:0,5:5:14.98:123,15,0	0/0:10,0:10:8.86:0,9,69	0/0:8,0:7:4.60:0,5,74	0/0:28,0:28:63.15:0,63,665	0/0:19,1:20:29.49:0,29,519	1/1:3,1:18:27.44:95,27,0	0/0:21,0:21:54.11:0,54,555	0/0:23,1:24:38.49:0,38,600	1/1:3,21:24:62.89:514,63,0	1/1:0,11:11:23.94:197,24,0	1/1:3,0:22:30.55:88,31,0	1/1:2,0:9:14.51:41,15,0	1/1:4,0:19:30.32:88,30,0	0/0:30,0:30:69.13:0,69,713	0/0:18,0:18:48.12:0,48,512	1/1:4,24:28:71.91:591,72,0	0/0:16,2:18:11.45:0,11,327	0/0:18,0:19:50.96:0,51,526	0/0:14,0:14:30.07:0,30,314	0/0:19,0:19:53.98:0,54,549	0/0:18,1:19:9.28:0,9,285	0/0:18,0:20:44.92:0,45,450	0/0:16,0:16:45.05:0,45,453	0/0:18,0:18:42.10:0,42,441	0/0:28,3:31:7.22:0,7,674	0/0:21,3:23:4.84:0,5,455	0/0:12,1:13:11.45:0,11,327
chr10	85739388	.	T	TAGAGCACTGACCGCTAGGAAGGT	2828.25	PASS	AB=0.714;AC=23;AF=0.958;AN=24;BaseQRankSum=-3.006;DP=51;FS=14.768;HRun=0;HaplotypeScore=36.0955;InbreedingCoeff=-0.1841;MQ=162.98;MQ0=0;MQRankSum=-1.848;QD=70.71;ReadPosRankSum=-1.517;VQSLOD=0.9660;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:1:2.99:23,3,0	./.	1/1:5,1:11:10.34:1313,10,0	0/1:6,1:10:15.32:894,0,15	./.	1/1:2,0:2:3.01:73,3,0	1/1:2,0:2:3.01:58,3,0	1/1:1,0:1:3:27,3,0	./.	1/1:3,0:3:9.03:193,9,0	./.	./.	./.	./.	./.	./.	1/1:4,0:4:5.99:67,6,0	./.	1/1:3,0:3:9.01:120,9,0	1/1:1,0:1:2.99:24,3,0	1/1:1,0:1:3:25,3,0	./.	./.	./.	./.	./.	./.	1/1:1,0:1:3.01:90,3,0
chr10	85740014	.	TA	T	2887.46	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=0.079;DP=495;FS=3.051;HRun=9;HaplotypeScore=61.5581;InbreedingCoeff=0.9878;MQ=82.01;MQ0=0;MQRankSum=-1.276;QD=19.91;ReadPosRankSum=-0.914;VQSLOD=3.8677;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:31:74.17:0,74,389	0/0:0,0:6:17.08:0,17,87	0/0:26,0:26:32.05:0,32,373	0/0:7,0:7:15.04:0,15,173	0/0:19,0:19:45.13:0,45,519	0/0:15,0:15:42.12:0,42,485	0/0:26,1:27:41.73:0,42,724	1/1:4,17:20:45:407,45,0	0/0:10,0:10:24.07:0,24,277	0/0:4,0:17:36.93:0,37,188	0/0:2,0:13:25.69:0,26,135	0/0:19,0:19:45.13:0,45,519	0/0:5,0:5:12.04:0,12,139	0/0:9,0:9:27.08:0,27,312	0/0:11,0:11:30.09:0,30,346	0/0:19,0:19:54.16:0,54,623	0/0:2,0:31:82.67:0,83,435	0/0:2,0:19:42.61:0,43,217	1/1:5,17:22:53.99:484,54,0	1/1:3,13:16:36.02:329,36,0	1/1:3,32:35:90.04:824,90,0	0/0:12,0:12:33.10:0,33,381	0/0:10,0:10:27.08:0,27,312	0/0:29,0:29:81.24:0,81,935	0/0:14,0:15:29.14:0,29,369	1/1:3,17:22:24.83:410,25,0	1/1:3,17:20:41.97:384,42,0	1/1:0,9:9:27.01:247,27,0
chr10	85740967	.	G	GA	638.97	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-3.926;DP=553;FS=0.000;HRun=9;HaplotypeScore=64.3401;InbreedingCoeff=0.5186;MQ=85.89;MQ0=0;MQRankSum=-1.174;QD=11.83;ReadPosRankSum=0.144;VQSLOD=2.7056;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,144,1227	0/0:6,0:6:14.87:0,15,119	0/0:29,0:24:1.08:0,1,181	0/1:22,0:18:14.39:14,0,56	0/0:16,0:16:14.60:0,15,256	0/0:21,0:21:41.96:0,42,361	0/0:19,0:19:50.93:0,51,430	0/0:24,0:24:54.86:0,55,464	0/0:17,0:17:47.96:0,48,410	0/0:9,0:9:17.99:0,18,154	0/0:15,0:15:32.98:0,33,284	0/0:22,0:22:62.90:0,63,532	0/0:18,0:18:44.94:0,45,382	0/0:23,0:23:62.99:0,63,546	0/0:18,0:18:44.89:0,45,369	0/0:21,0:21:56.97:0,57,491	0/0:28,0:28:71.96:0,72,620	1/1:3,26:31:42.15:729,42,0	0/0:28,0:28:62.93:0,63,537	0/0:6,0:6:11.97:0,12,98	0/0:27,0:27:77.98:0,78,677	0/0:7,0:7:14.98:0,15,126	0/0:5,0:5:15:0,15,130	0/0:24,0:24:59.87:0,60,502	0/0:16,0:16:32.99:0,33,286	0/0:19,0:19:44.86:0,45,375	0/0:23,0:23:62.95:0,63,540	0/0:6,0:6:14.99:0,15,130
chr10	85742842	.	A	AT	669.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.529;DP=583;FS=2.541;HRun=9;HaplotypeScore=56.2256;InbreedingCoeff=0.7994;MQ=70.04;MQ0=4;MQRankSum=-0.854;QD=20.91;ReadPosRankSum=1.681;VQSLOD=4.4230;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:43:83.57:0,84,931	0/0:8,0:8:20.97:0,21,177	0/0:16,0:15:29.94:0,30,252	0/0:13,0:11:1.24:0,1,109	0/0:21,0:21:59.99:0,60,521	0/0:25,0:25:56.97:0,57,495	0/0:12,0:12:18.43:0,18,246	0/0:32,0:32:81.79:0,82,694	0/0:12,0:12:26.96:0,27,234	0/0:27,0:27:71.96:0,72,623	0/0:25,0:24:68.98:0,69,598	0/0:14,0:14:32.98:0,33,286	0/0:13,0:13:32.98:0,33,286	0/0:17,0:17:44.99:0,45,390	0/0:16,0:16:41.98:0,42,365	0/0:11,0:11:29.99:0,30,260	0/0:46,0:46:99:0,126,1088	1/1:5,27:32:68.74:764,69,0	0/0:30,0:28:64.99:0,65,549	0/0:24,0:24:53.97:0,54,469	0/0:9,0:9:20.98:0,21,178	0/0:19,0:19:50.98:0,51,443	0/0:26,0:26:56.95:0,57,494	0/0:27,0:27:65.90:0,66,564	0/0:14,0:14:38.99:0,39,339	0/0:27,0:27:71.95:0,72,621	0/0:11,0:11:20.95:0,21,178	0/0:12,0:12:26.99:0,27,234
chr10	85742939	.	C	CT	1340.52	PASS	AB=0.727;AC=9;AF=0.161;AN=56;BaseQRankSum=-8.140;DP=512;FS=2.286;HRun=13;HaplotypeScore=54.9625;InbreedingCoeff=0.3426;MQ=61.67;MQ0=9;MQRankSum=-0.650;QD=8.12;ReadPosRankSum=1.154;VQSLOD=2.4747;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:12,13:27:58.17:280,0,58	0/1:2,4:7:8.40:71,0,8	0/0:12,0:7:13.38:0,13,75	0/0:12,0:5:8.74:0,9,52	0/0:22,1:22:7.63:0,8,190	0/0:17,0:17:41.53:0,42,282	0/0:21,0:21:40.54:0,41,266	0/1:23,0:23:1.88:2,0,157	0/0:14,0:16:28.76:0,29,189	1/1:5,18:24:41.86:366,42,0	0/1:7,9:15:7.38:119,0,7	0/0:21,2:23:3.64:0,4,304	0/0:13,0:16:35.68:0,36,215	0/0:15,0:17:25.55:0,26,158	0/0:18,1:20:15.78:0,16,243	0/0:16,0:17:37.47:0,37,240	1/1:10,23:34:14.94:369,15,0	0/1:21,10:32:22.43:278,0,22	0/0:18,0:16:24.82:0,25,153	0/0:19,0:19:40.52:0,41,253	0/0:18,3:21:13.76:0,14,237	0/0:12,0:12:23.76:0,24,163	0/0:15,1:16:4.79:0,5,172	0/0:10,0:10:22.83:0,23,147	0/0:13,0:13:24.91:0,25,160	0/0:18,0:18:37.83:0,38,248	0/0:15,0:16:39.56:0,40,247	0/0:6,0:6:14.22:0,14,87
chr10	85743624	.	A	ATCTTCGCC	20258.88	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-7.716;DP=573;FS=7.275;HRun=0;HaplotypeScore=143.5536;InbreedingCoeff=0.9876;MQ=88.20;MQ0=0;MQRankSum=-15.369;QD=76.16;ReadPosRankSum=-0.999;VQSLOD=4.3153;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,25:42:84.24:3344,84,0	1/1:4,3:7:9.03:263,9,0	0/0:25,0:25:69.23:0,69,1690	0/0:25,0:25:71.15:0,71,1676	0/0:18,0:18:51.18:0,51,1380	0/0:16,0:16:42.14:0,42,1040	0/0:22,0:22:63.19:0,63,1580	1/1:13,12:30:78.20:2613,78,0	0/0:18,0:18:45.15:0,45,1204	1/1:7,11:22:42.13:1488,42,0	1/1:3,6:10:21.07:852,21,0	0/0:24,0:24:72.25:0,72,1951	0/0:24,0:24:66.19:0,66,1698	0/0:17,0:17:48.15:0,48,1206	0/0:23,0:23:66.20:0,66,1691	0/0:18,0:18:51.18:0,51,1402	1/1:10,8:20:27.09:1139,27,0	1/1:3,6:12:24.08:816,24,0	1/1:6,13:21:57.13:2024,57,0	1/1:3,8:11:27.09:978,27,0	1/1:11,13:30:45.14:1269,45,0	0/0:21,0:21:51.18:0,51,1413	0/0:6,0:6:18.06:0,18,499	0/0:36,0:36:96.33:0,96,2606	0/0:14,0:14:42.14:0,42,1042	1/1:11,20:33:87.28:3173,87,0	1/1:5,12:18:45.15:1867,45,0	1/1:6,1:10:15.05:432,15,0
chr10	85746427	.	GT	G	7227.72	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=13.526;DP=652;FS=1.339;HRun=9;HaplotypeScore=64.1841;InbreedingCoeff=0.9956;MQ=83.75;MQ0=0;MQRankSum=-2.337;QD=23.32;ReadPosRankSum=0.722;VQSLOD=5.6857;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:31:81.03:741,81,0	1/1:1,4:5:12.01:110,12,0	0/0:23,0:23:43.87:0,44,500	0/0:22,0:22:36.07:0,36,392	0/0:34,0:34:99:0,99,1129	0/0:28,0:28:75.21:0,75,855	0/0:25,0:25:63.19:0,63,727	1/1:3,36:39:99:965,108,0	0/0:20,0:20:57.15:0,57,648	1/1:0,25:25:75.01:679,75,0	1/1:1,15:16:45.02:412,45,0	0/0:22,0:22:63.17:0,63,716	0/0:22,0:22:63.17:0,63,716	0/0:20,0:20:54.15:0,54,608	0/0:21,0:21:54.12:0,54,608	0/0:20,0:21:62.94:0,63,681	1/1:1,28:29:84.04:769,84,0	1/1:3,22:25:28.44:515,28,0	1/1:5,17:22:54:486,54,0	1/1:1,16:17:42.01:384,42,0	1/1:5,24:29:63.02:577,63,0	0/0:17,0:17:42.11:0,42,474	0/0:25,0:25:72.20:0,72,823	0/0:18,0:18:42.12:0,42,485	0/0:23,0:24:63.15:0,63,705	1/1:3,28:31:84.04:768,84,0	1/1:5,17:22:45.02:412,45,0	1/1:4,15:19:45:412,45,0
chr10	85746711	.	TC	T	6151.58	PASS	AB=0.524;AC=15;AF=0.268;AN=56;BaseQRankSum=11.946;DP=606;FS=7.751;HRun=3;HaplotypeScore=58.4319;InbreedingCoeff=0.9157;MQ=85.15;MQ0=0;MQRankSum=-2.297;QD=32.72;ReadPosRankSum=0.382;VQSLOD=4.7504;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1404	0/0:7,0:7:21.07:0,21,302	0/0:17,0:17:51.17:0,51,725	0/0:21,0:21:52.94:0,53,694	0/0:22,0:22:57.19:0,57,818	0/0:23,0:23:69.23:0,69,991	0/0:27,0:27:75.22:0,75,1039	1/1:4,34:38:96.30:1188,96,0	0/0:22,0:22:63.20:0,63,887	0/0:22,0:22:66.18:0,66,918	0/0:18,0:18:54.18:0,54,768	0/0:18,0:18:48.16:0,48,690	0/0:20,0:20:60.20:0,60,864	0/0:16,0:16:48.16:0,48,686	0/0:29,0:29:87.28:0,87,1233	0/0:16,0:16:45.15:0,45,645	0/0:35,0:35:99:0,99,1381	0/1:1,10:11:10.09:338,0,10	1/1:0,21:21:63.18:766,63,0	1/1:2,19:21:54.17:669,54,0	1/1:1,34:35:93.29:1153,93,0	0/0:11,0:11:33.11:0,33,475	0/0:16,0:16:39.13:0,39,559	0/0:26,0:26:78.25:0,78,1102	0/0:18,0:18:54.18:0,54,777	1/1:2,20:22:19.99:698,20,0	1/1:3,15:18:45.14:558,45,0	1/1:1,21:22:63.20:781,63,0
chr10	85746981	.	T	TC	10008.06	PASS	AB=0.725;AC=18;AF=0.321;AN=56;BaseQRankSum=19.285;DP=650;FS=0.304;HRun=3;HaplotypeScore=106.1027;InbreedingCoeff=0.8369;MQ=88.56;MQ0=0;MQRankSum=-4.913;QD=39.56;ReadPosRankSum=3.557;VQSLOD=3.9901;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,47:47:99:2013,126,0	0/1:2,9:11:20.88:266,0,21	0/0:22,0:22:63.19:0,63,843	0/0:28,0:28:53.82:0,54,1014	0/0:18,1:19:54.18:0,54,755	0/0:18,0:18:54.17:0,54,736	1/1:0,28:28:69.22:1089,69,0	0/0:38,0:38:99:0,108,1481	0/0:25,0:25:72.24:0,72,1004	1/1:1,28:29:84.25:1292,84,0	1/1:1,16:17:48.16:755,48,0	1/1:1,26:27:75.26:1195,75,0	1/1:2,23:24:72.25:1140,72,0	1/1:1,22:23:66.21:981,66,0	0/0:30,0:30:87.29:0,87,1215	0/0:24,0:24:72.24:0,72,1002	1/1:0,28:28:78.26:1232,78,0	0/0:18,0:18:54.18:0,54,754	0/0:16,0:16:42.14:0,42,587	0/0:16,0:16:48.14:0,48,639	0/0:31,0:31:87.27:0,87,1197	0/0:11,0:11:33.11:0,33,462	0/0:24,0:24:69.22:0,69,948	0/0:26,0:26:75.25:0,75,1044	0/0:15,0:15:42.14:0,42,587	0/1:16,2:18:44.64:45,0,578	0/0:19,0:19:57.17:0,57,775	0/0:16,0:16:45.15:0,45,629
chr10	85747198	.	A	AC	738.46	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.375;DP=529;FS=3.847;HRun=7;HaplotypeScore=71.9929;InbreedingCoeff=0.9263;MQ=87.07;MQ0=0;MQRankSum=-0.761;QD=29.54;ReadPosRankSum=1.188;VQSLOD=4.3069;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:63.09:0,63,608	0/0:5,0:5:15.02:0,15,144	0/0:20,0:20:42.04:0,42,396	0/0:21,1:21:15.57:0,16,305	0/0:11,0:11:24.03:0,24,232	0/0:18,0:18:51.05:0,51,480	0/0:29,0:29:78.11:0,78,749	0/0:19,0:19:27.03:0,27,261	0/0:19,0:19:45.06:0,45,432	0/0:13,0:13:30.04:0,30,290	0/0:11,0:11:23.95:0,24,219	0/0:27,0:27:75.12:0,75,722	0/0:19,0:19:48.03:0,48,452	0/0:18,0:18:42.05:0,42,405	0/0:21,0:20:60.08:0,60,574	0/0:12,0:12:30.05:0,30,289	0/0:31,0:31:81.10:0,81,774	1/1:0,25:25:69.21:833,69,0	0/0:15,0:15:27.02:0,27,259	0/0:19,0:19:42.06:0,42,403	0/0:49,0:49:99:0,126,1210	0/0:10,0:10:24.03:0,24,232	0/0:8,0:8:12:0,12,110	0/0:25,0:25:60.09:0,60,579	0/0:11,0:11:27.04:0,27,260	0/0:19,0:19:51.08:0,51,492	0/0:19,0:19:51.06:0,51,486	0/0:7,0:7:18.03:0,18,174
chr10	85747412	.	G	GCA	7206.67	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-12.915;DP=652;FS=3.658;HRun=0;HaplotypeScore=77.0589;InbreedingCoeff=0.9984;MQ=87.01;MQ0=0;MQRankSum=-2.792;QD=48.04;ReadPosRankSum=1.198;VQSLOD=6.0820;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,45:51:99:2303,123,0	1/1:0,7:7:21.07:393,21,0	0/0:17,0:17:21.66:0,22,557	0/0:29,0:29:39.86:0,40,938	0/0:18,0:18:51.17:0,51,750	0/0:18,0:18:45.15:0,45,661	1/1:1,27:28:69.24:1275,69,0	0/0:24,0:24:66.22:0,66,971	0/0:27,0:27:81.25:0,81,1153	1/1:0,12:13:36.12:653,36,0	1/1:0,20:20:57.20:1066,57,0	0/0:28,0:28:81.24:0,81,1150	0/0:18,0:18:51.14:0,51,709	0/0:18,0:18:54.18:0,54,778	0/0:23,0:23:69.22:0,69,996	0/0:18,0:18:54.18:0,54,791	1/1:1,30:31:81.28:1517,81,0	0/0:28,0:28:84.28:0,84,1230	0/0:21,0:21:57.16:0,57,794	0/0:20,0:20:60.20:0,60,881	0/0:36,0:36:99:0,108,1548	0/0:21,0:21:57.16:0,57,799	0/0:28,0:28:84.28:0,84,1232	0/0:18,0:18:51.17:0,51,750	0/0:22,0:22:66.18:0,66,929	0/0:30,1:31:37.10:0,37,1268	0/0:20,0:20:57.19:0,57,838	0/0:19,0:19:57.19:0,57,828
chr10	85747760	.	T	TA	2239.42	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.877;DP=559;FS=7.008;HRun=1;HaplotypeScore=54.3687;InbreedingCoeff=0.9859;MQ=86.41;MQ0=0;MQRankSum=-2.695;QD=35.55;ReadPosRankSum=0.975;VQSLOD=3.3249;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1476	0/0:4,0:4:12.04:0,12,156	0/0:20,0:20:53.26:0,53,679	0/0:19,0:19:43.65:0,44,467	0/0:26,0:26:72.23:0,72,933	0/0:19,0:19:57.13:0,57,719	0/0:20,0:20:57.19:0,57,740	0/0:16,0:16:45.15:0,45,584	0/0:18,0:18:54.18:0,54,701	0/0:18,0:18:51.17:0,51,661	0/0:15,0:15:42.09:0,42,525	1/1:1,19:20:51.17:764,51,0	1/1:0,17:17:36.12:540,36,0	1/1:0,26:26:72.24:1079,72,0	0/0:21,0:21:57.18:0,57,739	0/0:11,0:11:33.09:0,33,414	0/0:46,0:46:99:0,138,1773	0/0:26,0:26:75.24:0,75,973	0/0:12,0:12:33.11:0,33,427	0/0:15,0:15:45.13:0,45,570	0/0:20,0:20:57.18:0,57,739	0/0:24,0:24:63.19:0,63,801	0/0:11,0:11:33.11:0,33,425	0/0:31,0:31:93.30:0,93,1206	0/0:15,0:15:45.15:0,45,584	0/0:27,0:27:78.25:0,78,1000	0/0:17,0:17:51.17:0,51,662	0/0:6,0:6:18.06:0,18,234
chr10	85749300	.	T	TGC	1800.70	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-0.707;DP=453;FS=35.837;HRun=0;HaplotypeScore=86.2440;InbreedingCoeff=0.9453;MQ=70.36;MQ0=9;MQRankSum=-1.722;QD=12.25;ReadPosRankSum=-2.066;VQSLOD=1.2879;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:38.82:0,39,302	0/0:5,0:5:5.97:0,6,46	0/0:17,0:10:18:0,18,166	0/0:22,0:12:29.45:0,29,234	0/0:9,0:9:17.97:0,18,162	0/0:18,0:18:40.93:0,41,357	0/0:21,0:21:32.97:0,33,278	1/1:29,0:28:58.55:411,59,0	0/0:14,0:14:29.99:0,30,258	0/0:19,0:19:41.94:0,42,385	0/0:13,0:12:23.72:0,24,186	0/0:11,0:11:23.97:0,24,199	0/0:15,0:14:29.71:0,30,253	0/0:8,0:7:11.02:0,11,100	0/0:14,0:14:38.94:0,39,324	0/0:19,0:18:44.99:0,45,394	0/0:15,0:15:38.63:0,39,327	1/1:5,15:21:8.76:103,9,0	1/1:14,0:14:10.84:227,11,0	1/1:13,0:13:27.95:190,28,0	1/1:22,0:22:12.78:248,13,0	0/0:8,0:7:15:0,15,138	0/0:11,0:10:14.91:0,15,118	0/0:25,0:25:45.09:0,45,470	0/0:12,0:12:26.97:0,27,227	1/1:18,0:18:35.67:310,36,0	1/1:16,0:16:36.69:232,37,0	1/1:14,0:14:38.47:282,38,0
chr10	85749303	.	GCTCTCTCT	G	714.52	PASS	AB=0.790;AC=15;AF=0.288;AN=52;BaseQRankSum=5.841;DP=493;FS=2.018;HRun=0;HaplotypeScore=125.3673;InbreedingCoeff=0.3571;MQ=65.19;MQ0=11;MQRankSum=-4.675;QD=4.30;ReadPosRankSum=1.575;VQSLOD=2.1474;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:34:5.76:112,6,0	0/1:4,0:5:6.62:7,0,181	./.	./.	0/0:13,0:13:15.05:0,15,498	0/0:19,0:22:24.08:0,24,799	1/1:16,0:19:3.01:56,3,0	0/0:27,0:26:2.98:0,3,21	0/1:10,0:16:0.85:1,0,133	0/0:21,0:21:45.21:0,45,1270	0/0:14,0:13:6.02:0,6,211	0/1:6,8:14:27.82:193,0,28	1/1:12,8:17:13.26:259,13,0	1/1:7,2:8:6.02:113,6,0	0/0:13,0:16:18.03:0,18,411	0/0:16,0:19:15.03:0,15,292	0/0:16,0:20:21.50:0,21,340	0/0:21,0:22:15.05:0,15,427	0/0:14,0:14:0.47:0,0,1	1/1:11,0:13:6.45:48,6,0	0/0:21,0:21:6.02:0,6,83	0/0:8,0:7:9.03:0,9,263	0/0:8,0:13:8.08:0,8,210	0/0:31,0:32:30.10:0,30,1108	0/0:11,0:13:6.01:0,6,147	0/1:16,0:18:43.34:43,0,51	0/1:13,0:15:35.21:35,0,49	0/0:15,0:15:9.78:0,10,113
chr10	85749783	.	CA	C	2179.79	PASS	AB=0.754;AC=25;AF=0.446;AN=56;BaseQRankSum=5.005;DP=496;FS=17.220;HRun=13;HaplotypeScore=75.0441;InbreedingCoeff=0.5307;MQ=81.55;MQ0=2;MQRankSum=-0.907;QD=7.62;ReadPosRankSum=2.992;VQSLOD=0.9134;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,20:26:41.69:342,42,0	0/0:4,0:10:16.86:0,17,95	0/0:30,0:24:20.20:0,20,158	0/0:22,0:21:0.08:0,0,74	0/0:15,1:18:7.96:0,8,219	0/0:18,0:18:45.05:0,45,431	1/1:2,10:12:31.86:225,32,0	0/1:8,14:22:13.67:237,0,14	0/0:11,0:12:20.85:0,21,181	0/0:2,1:15:12.90:0,13,167	0/0:13,0:21:46.33:0,46,294	1/1:3,0:14:22.39:65,22,0	1/1:4,0:12:8.12:24,8,0	1/1:3,0:17:22.39:65,22,0	0/0:20,1:23:15.47:0,15,371	0/1:24,4:29:18.52:19,0,343	0/0:2,0:16:28.71:0,29,155	0/0:6,0:15:34.70:0,35,221	1/1:4,8:13:25.83:175,26,0	0/1:1,10:12:0.31:152,0,0	1/1:2,8:10:17.89:131,18,0	0/1:7,0:7:2.92:3,0,68	0/0:8,0:8:12.02:0,12,117	0/1:15,4:20:33.76:34,0,329	0/1:15,2:18:1.92:2,0,285	1/1:9,16:26:35.26:353,35,0	1/1:9,14:24:40.77:290,41,0	0/1:5,17:23:6.46:263,0,6
chr10	85751384	.	G	GAA	2091.39	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-4.772;DP=528;FS=33.044;HRun=9;HaplotypeScore=70.4904;InbreedingCoeff=0.9605;MQ=58.49;MQ0=1;MQRankSum=-0.652;QD=23.77;ReadPosRankSum=-1.617;VQSLOD=0.4937;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:63.06:0,63,651	1/1:1,4:8:14.54:193,15,0	0/0:8,0:3:6.01:0,6,62	0/0:12,0:8:23.97:0,24,235	0/0:16,0:16:36.05:0,36,383	0/0:22,0:22:63.16:0,63,671	0/0:13,0:13:33.08:0,33,351	0/0:34,0:34:75.13:0,75,797	0/0:18,0:18:44.64:0,45,526	1/1:5,18:25:51.10:727,51,0	1/1:3,12:17:35.34:482,35,0	0/0:26,0:27:50.90:0,51,590	0/0:16,0:16:45.11:0,45,475	0/0:18,0:18:45.09:0,45,471	0/0:19,0:19:42.10:0,42,447	0/0:19,0:19:50.90:0,51,542	1/1:6,29:38:57.09:847,57,0	0/0:23,0:24:48.25:0,48,481	0/0:19,0:19:38.05:0,38,488	0/0:18,0:18:45.09:0,45,469	0/0:11,0:11:17.75:0,18,191	0/0:9,0:9:24.06:0,24,255	0/0:25,0:25:56.46:0,56,605	0/0:19,0:19:47.96:0,48,492	0/0:15,0:15:30.04:0,30,314	0/0:18,0:18:42.06:0,42,425	0/0:26,0:26:63.13:0,63,661	0/0:8,0:8:18.05:0,18,192
chr10	85752658	.	A	AGG	19779.69	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=12.183;DP=735;FS=3.287;HRun=1;HaplotypeScore=112.7078;InbreedingCoeff=0.9977;MQ=88.28;MQ0=0;MQRankSum=-6.301;QD=45.06;ReadPosRankSum=1.608;VQSLOD=5.0718;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,59:60:99:2260,120,0	1/1:0,5:5:15.05:289,15,0	0/0:33,0:33:91.31:0,91,1296	0/0:31,0:30:62.24:0,62,999	0/0:19,0:18:48.14:0,48,691	0/0:19,0:19:48.16:0,48,732	1/1:1,29:30:69.18:1292,69,0	1/1:1,16:17:48.13:792,48,0	0/0:37,0:37:99:0,105,1581	1/1:1,25:26:75.18:1322,75,0	1/1:1,16:17:33.11:632,33,0	1/1:0,42:42:98.96:1897,99,0	1/1:1,15:16:42.14:810,42,0	1/1:1,25:26:66.23:1274,66,0	0/0:17,0:17:51.16:0,51,757	0/0:15,0:15:45.14:0,45,666	1/1:0,41:41:99:1968,102,0	0/0:28,0:28:75.06:0,75,1002	1/1:1,18:20:56.94:919,57,0	1/1:0,20:20:48.16:924,48,0	1/1:1,58:60:99:2607,135,0	0/0:16,0:16:42.13:0,42,621	0/0:18,0:18:54.18:0,54,812	0/0:40,0:40:99:0,114,1615	0/0:23,0:23:66.22:0,66,1010	1/1:0,26:26:72.12:1175,72,0	1/1:2,19:21:51.17:983,51,0	1/1:0,12:12:33.11:637,33,0
chr10	85753986	.	GCTTTCTTTCTTT	G	14049.93	PASS	AB=0.577;AC=23;AF=0.411;AN=56;BaseQRankSum=6.238;DP=720;FS=0.736;HRun=0;HaplotypeScore=273.6591;InbreedingCoeff=0.9273;MQ=64.80;MQ0=0;MQRankSum=-13.339;QD=45.18;ReadPosRankSum=-1.510;VQSLOD=4.1000;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,32:40:60.21:2063,60,0	0/0:3,0:13:33.05:0,33,772	0/0:17,0:16:24.04:0,24,1015	0/0:15,0:14:17.23:0,17,608	0/0:34,0:34:75.24:0,75,4051	0/0:16,0:16:42.08:0,42,2126	1/1:4,15:19:21.07:745,21,0	1/1:9,14:23:42.06:1091,42,0	0/0:22,0:22:42.14:0,42,2233	0/0:10,0:43:99:0,111,2746	0/0:7,0:30:75.23:0,75,1780	1/1:6,22:28:39.13:1384,39,0	1/1:6,15:21:27.09:958,27,0	1/1:8,21:29:36.12:1278,36,0	0/0:34,0:34:72.22:0,72,3700	0/0:36,0:36:99:0,102,5740	0/0:10,0:37:87.27:0,87,2120	0/0:5,0:25:51.16:0,51,2499	1/1:9,15:24:44.95:1004,45,0	1/1:1,18:19:36.05:1106,36,0	1/1:13,1:14:14.90:190,15,0	0/0:20,0:20:48.13:0,48,2534	0/0:22,0:22:48.06:0,48,2383	0/0:25,0:25:57.18:0,57,3079	0/0:20,0:20:48.14:0,48,2433	0/1:12,33:45:7.44:2217,0,7	1/1:6,21:27:39.13:1384,39,0	1/1:12,10:22:11.01:629,11,0
chr10	85756935	.	C	CT	1239.19	PASS	AB=0.845;AC=21;AF=0.375;AN=56;BaseQRankSum=2.529;DP=564;FS=1.005;HRun=15;HaplotypeScore=95.8118;InbreedingCoeff=0.1476;MQ=63.34;MQ0=2;MQRankSum=-1.747;QD=4.08;ReadPosRankSum=-4.198;VQSLOD=0.3106;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:39:12.35:0,12,242	0/0:7,0:7:5.78:0,6,36	0/1:21,0:15:7.22:7,0,66	0/0:18,0:12:12.74:0,13,70	0/0:19,0:20:18.58:0,19,111	0/0:18,1:19:11.64:0,12,174	0/0:26,0:31:41.88:0,42,215	1/1:10,11:22:30.68:233,31,0	0/0:26,0:26:35.13:0,35,207	0/0:17,0:16:28.88:0,29,171	0/0:6,0:7:7.60:0,8,41	1/1:21,5:26:24.71:218,25,0	1/1:9,4:17:2.69:91,3,0	1/1:10,9:21:23.69:170,24,0	0/1:17,2:19:32.08:32,0,111	0/1:17,1:18:26.38:26,0,86	0/0:32,0:32:24.10:0,24,237	0/1:19,1:23:6.58:7,0,80	0/1:24,4:29:4.82:196,0,5	0/1:6,7:13:13.86:68,0,14	0/1:7,5:12:16.45:16,0,24	0/1:18,1:19:22.46:22,0,98	0/0:17,0:18:20.20:0,20,106	0/0:22,0:23:37.13:0,37,234	0/1:11,0:13:12.77:13,0,43	0/1:10,4:14:12.91:96,0,13	1/1:7,14:23:12.53:188,13,0	0/1:5,8:11:24.04:35,0,24
chr10	85758064	.	G	GACAGTC	19891.76	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=1.794;DP=685;FS=12.282;HRun=0;HaplotypeScore=169.7238;InbreedingCoeff=0.9965;MQ=69.39;MQ0=0;MQRankSum=-17.860;QD=62.55;ReadPosRankSum=-0.454;VQSLOD=4.7088;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,24:32:60.21:2048,60,0	0/0:10,0:10:27.09:0,27,553	0/0:13,0:13:30.10:0,30,603	0/0:18,0:18:20.02:0,20,631	0/0:17,0:17:48.16:0,48,1069	0/0:17,0:17:33.11:0,33,736	1/1:15,18:36:60.21:2053,60,0	1/1:12,16:30:69.22:2228,69,0	0/0:34,0:34:96.31:0,96,2111	0/0:26,0:26:69.24:0,69,1547	0/0:12,0:12:36.11:0,36,741	1/1:12,31:43:99:3462,102,0	1/1:6,14:20:39.13:1310,39,0	1/1:5,16:23:54.19:1819,54,0	0/0:34,0:34:96.33:0,96,2157	0/0:31,0:31:84.26:0,84,1797	0/0:32,0:32:78.27:0,78,1749	0/0:36,0:36:99:0,99,2129	1/1:11,10:24:42.11:1192,42,0	1/1:5,6:11:24.08:821,24,0	1/1:28,22:53:41.66:1354,42,0	0/0:20,0:20:54.19:0,54,1213	0/0:18,0:18:42.13:0,42,901	0/0:25,0:25:72.25:0,72,1590	0/0:24,0:24:63.22:0,63,1387	1/1:8,15:23:51.17:1754,51,0	1/1:4,13:17:39.13:1335,39,0	1/1:1,5:6:15.05:516,15,0
chr10	85759349	.	TCA	T	12153.47	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=12.914;DP=479;FS=24.731;HRun=0;HaplotypeScore=130.5856;InbreedingCoeff=0.9881;MQ=51.96;MQ0=1;MQRankSum=-5.978;QD=37.74;ReadPosRankSum=0.832;VQSLOD=3.9283;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,33:38:90.30:1322,90,0	1/1:0,3:3:9.03:132,9,0	0/0:23,0:20:54.10:0,54,861	0/0:24,0:17:33.94:0,34,748	0/0:9,0:9:27.09:0,27,496	0/0:12,0:12:36.11:0,36,642	1/1:1,16:17:48.15:687,48,0	1/1:0,29:29:87.24:1221,87,0	0/0:8,0:8:21.07:0,21,384	1/1:2,13:15:33.10:465,33,0	1/1:1,19:20:48.16:704,48,0	1/1:0,26:26:75.25:1102,75,0	1/1:2,19:21:60.20:881,60,0	1/1:2,26:28:84.28:1232,84,0	0/0:13,0:13:33.11:0,33,618	0/0:13,0:13:35.90:0,36,599	1/1:4,23:27:69.19:986,69,0	0/0:18,0:18:51.13:0,51,887	1/1:0,19:19:50.68:681,51,0	1/1:0,13:13:36.12:529,36,0	1/1:1,22:23:36.51:529,37,0	0/0:6,0:6:18.04:0,18,293	0/0:8,0:8:21.04:0,21,329	0/0:11,0:11:30.08:0,30,528	0/0:12,0:12:36.11:0,36,642	1/1:3,19:22:60.18:844,60,0	1/1:3,12:15:42.11:576,42,0	1/1:0,6:6:18.06:265,18,0
chr10	85759373	.	GCCCCACCCCA	G	14093.27	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=9.950;DP=396;FS=2.965;HRun=0;HaplotypeScore=177.1273;InbreedingCoeff=0.9589;MQ=59.90;MQ0=0;MQRankSum=-10.962;QD=50.51;ReadPosRankSum=1.201;VQSLOD=4.6800;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,24:41:80.77:1839,81,0	1/1:1,3:4:12.02:307,12,0	0/0:13,0:10:15.04:0,15,226	0/0:20,0:15:27.09:0,27,506	0/0:7,0:7:21.07:0,21,922	0/0:11,0:11:33.11:0,33,1619	1/1:7,9:16:36.04:847,36,0	1/1:14,7:21:27:636,27,0	0/0:4,0:4:12.04:0,12,529	1/1:4,5:9:26.95:625,27,0	1/1:4,10:14:30.09:828,30,0	1/1:10,12:22:39.06:1018,39,0	1/1:6,13:19:48.10:1305,48,0	1/1:5,21:26:57.14:1654,57,0	0/0:10,0:10:15.04:0,15,608	0/0:10,0:10:23.86:0,24,782	1/1:7,14:21:48:1213,48,0	0/0:16,0:16:36.09:0,36,1575	1/1:4,4:8:15.02:400,15,0	1/1:6,13:19:21.07:613,21,0	1/1:14,9:23:22.99:635,23,0	0/0:6,0:6:18.06:0,18,782	0/0:5,0:5:8.23:0,8,75	0/0:4,0:4:9.03:0,9,375	0/0:10,0:9:27.09:0,27,1338	1/1:5,10:15:36.08:1013,36,0	1/1:5,11:16:27.09:853,27,0	1/1:2,3:5:12.01:305,12,0
chr10	85759379	.	CCCCACCCCA	C	10078.97	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=10.930;DP=363;FS=2.769;HRun=0;HaplotypeScore=169.5439;InbreedingCoeff=0.9699;MQ=61.53;MQ0=0;MQRankSum=-11.836;QD=39.68;ReadPosRankSum=1.936;VQSLOD=4.6031;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:38:30.31:1271,30,0	1/1:4,0:4:12.02:220,12,0	0/0:12,0:9:23.79:0,24,355	0/0:18,0:11:27.56:0,28,520	0/0:8,0:8:24.05:0,24,910	0/0:13,0:13:39.13:0,39,1704	1/1:14,1:15:36.04:616,36,0	1/1:18,0:18:33.02:547,33,0	0/0:6,0:6:18.06:0,18,720	1/1:9,0:9:26.95:452,27,0	1/1:13,0:13:30.08:577,30,0	1/1:20,0:20:39.06:728,39,0	1/1:17,0:17:48.10:929,48,0	1/1:25,0:25:57.14:1162,57,0	0/0:5,0:5:15.04:0,15,559	0/0:8,0:8:23.86:0,24,708	1/1:18,0:18:48:866,48,0	0/0:15,0:15:39.10:0,39,1558	1/1:8,0:8:18.03:349,18,0	1/1:16,1:17:21.04:416,21,0	1/1:19,0:19:23.07:433,23,0	0/0:6,0:6:18.06:0,18,711	0/0:5,0:5:11.22:0,11,124	0/0:4,0:4:9.03:0,9,330	0/0:9,0:8:27.09:0,27,1241	1/1:14,0:14:36.05:700,36,0	1/1:12,2:14:27.09:593,27,0	1/1:5,0:5:12.01:218,12,0
chr10	85761808	.	C	CG	1571.35	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=6.059;DP=269;FS=2.869;HRun=6;HaplotypeScore=37.2844;InbreedingCoeff=0.7666;MQ=83.23;MQ0=0;MQRankSum=-1.103;QD=19.64;ReadPosRankSum=-0.009;VQSLOD=2.6812;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:24.05:0,24,244	1/1:0,2:2:3.01:38,3,0	0/1:9,0:9:4.37:4,0,153	0/0:15,0:15:20.54:0,21,265	0/0:2,0:2:3.01:0,3,31	0/0:9,0:9:24.05:0,24,244	0/0:23,0:23:63.11:0,63,630	1/1:2,2:4:6.02:74,6,0	0/0:15,0:15:42.05:0,42,417	1/1:2,5:7:14.98:189,15,0	1/1:1,0:1:3.01:37,3,0	0/0:15,0:15:39.07:0,39,390	0/0:8,0:8:21.05:0,21,213	0/0:15,0:15:33.05:0,33,324	0/0:13,0:13:29.86:0,30,278	0/0:13,0:13:33.06:0,33,330	1/1:3,5:8:6.02:75,6,0	0/0:17,0:17:45.10:0,45,459	1/1:1,3:4:9.03:113,9,0	1/1:0,4:4:9.03:106,9,0	1/1:5,26:31:66.21:829,66,0	0/0:3,0:3:6.01:0,6,61	0/0:6,0:6:8.95:0,9,79	0/0:16,0:16:36.08:0,36,367	0/0:9,0:9:21.05:0,21,214	1/1:2,3:5:12.01:125,12,0	1/1:0,2:2:6.02:75,6,0	1/1:1,2:3:9.02:101,9,0
chr10	85763101	.	C	CCTTT	3407.68	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-8.665;DP=565;FS=2.048;HRun=0;HaplotypeScore=85.0317;InbreedingCoeff=0.9717;MQ=69.21;MQ0=2;MQRankSum=-0.217;QD=37.04;ReadPosRankSum=2.704;VQSLOD=3.9804;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:31:15.43:1063,15,0	0/0:4,0:4:12.03:0,12,198	0/0:23,0:13:14.22:0,14,234	0/0:19,0:12:25.10:0,25,230	0/0:29,0:29:81.21:0,81,1363	0/0:23,0:23:66.20:0,66,1150	1/1:0,10:10:12.04:323,12,0	0/0:37,0:37:96.15:0,96,1242	0/0:11,0:11:33.06:0,33,480	0/0:23,0:23:63.16:0,63,980	0/0:23,0:23:63.18:0,63,1096	1/1:2,14:17:21.07:566,21,0	1/1:0,19:19:36.12:970,36,0	1/1:1,13:15:18.06:486,18,0	0/0:6,0:6:18.04:0,18,278	0/0:17,0:16:48.11:0,48,766	0/0:34,0:34:90.22:0,90,1437	0/0:24,0:24:72.21:0,72,1270	0/0:21,0:21:59.94:0,60,805	0/0:32,0:32:87.20:0,87,1422	0/0:13,0:13:38.65:0,39,485	0/0:7,0:7:21.05:0,21,315	0/0:13,0:13:38.48:0,38,618	0/0:18,0:18:54.15:0,54,885	0/0:19,0:19:57.16:0,57,957	0/0:25,0:25:75.23:0,75,1335	0/0:27,0:27:78.18:0,78,1254	0/0:25,0:25:69.20:0,69,1196
chr10	85765688	.	CGTGTGTGTGCGTGTGTGTGCGTGTGTGCGTGTGTGTGTGT	C	1567.84	PASS	AB=0.982;AC=19;AF=0.352;AN=54;BaseQRankSum=1.296;DP=558;FS=2.557;HRun=0;HaplotypeScore=428.2820;InbreedingCoeff=0.6926;MQ=50.63;MQ0=44;MQRankSum=-2.278;QD=7.76;ReadPosRankSum=-1.759;VQSLOD=0.8323;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:49.26:0,49,1742	./.	0/0:12,0:4:5.37:0,5,24	0/1:17,0:6:0.02:0,0,0	0/0:17,0:15:35.99:0,36,1922	0/0:9,0:8:24.08:0,24,2188	0/0:38,0:32:47.16:0,47,1223	1/1:16,0:15:22.63:171,23,0	0/0:21,0:19:43.16:0,43,3134	0/1:27,0:22:99:121,0,162	1/1:18,0:17:5.99:50,6,0	0/0:24,0:23:12.71:0,13,105	0/0:15,0:13:7.11:0,7,61	0/0:20,0:16:8.98:0,9,73	0/0:23,0:23:63.51:0,64,4455	0/0:18,0:17:45.07:0,45,4248	0/1:16,0:16:41.84:42,0,157	0/0:29,0:26:46.92:0,47,2189	1/1:15,0:12:17.99:143,18,0	1/1:8,0:8:3:25,3,0	1/1:54,0:45:39.36:507,39,0	0/0:7,0:5:12.04:0,12,1161	0/0:9,0:7:21.05:0,21,1472	0/0:53,0:53:99:0,132,13485	0/0:18,0:16:29.73:0,30,3077	1/1:11,7:16:33.02:445,33,0	1/1:3,0:3:6.02:98,6,0	1/1:9,0:7:12.66:154,13,0
chr10	85765708	.	C	CGT	1826.30	PASS	AB=1.000;AC=26;AF=0.542;AN=48;BaseQRankSum=10.247;DP=513;FS=6.857;HRun=0;HaplotypeScore=144.8185;InbreedingCoeff=0.8631;MQ=46.59;MQ0=41;MQRankSum=-4.000;QD=5.97;ReadPosRankSum=-6.518;VQSLOD=0.4936;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:13,25:37:24.55:389,25,0	./.	./.	./.	0/0:11,0:9:18.02:0,18,209	0/0:15,0:14:31.05:0,31,373	1/1:31,9:34:35.90:511,36,0	1/1:9,0:7:4.38:25,4,0	0/0:20,0:19:13.95:0,14,311	1/1:7,0:16:7:44,7,0	0/1:14,0:13:0:0,0,0	1/1:23,0:22:31.64:170,32,0	1/1:24,0:23:27.99:163,28,0	1/1:21,0:17:32.72:170,33,0	0/0:20,0:20:50.95:0,51,600	0/0:18,0:18:42.13:0,42,538	1/1:16,2:18:10.58:58,11,0	0/0:21,1:18:10.73:0,11,199	1/1:4,0:10:11.80:137,12,0	0/1:1,0:10:0:0,0,0	1/1:57,0:47:12.20:139,12,0	0/0:11,0:8:15.05:0,15,189	0/0:9,0:7:18.06:0,18,227	0/0:58,0:57:99:0,100,1609	0/0:14,0:12:24.08:0,24,311	1/1:12,0:10:14.99:101,15,0	1/1:7,0:7:9.02:106,9,0	./.
chr10	85765712	.	TGTGC	T	643.43	PASS	AB=0.953;AC=9;AF=0.188;AN=48;BaseQRankSum=2.734;DP=471;FS=1.316;HRun=0;HaplotypeScore=128.8913;InbreedingCoeff=0.3660;MQ=47.95;MQ0=39;MQRankSum=-1.227;QD=3.83;ReadPosRankSum=-1.075;VQSLOD=2.2136;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:37:49.03:49,0,224	./.	./.	./.	0/0:10,0:8:15.69:0,16,102	0/0:16,0:15:11.30:0,11,381	0/1:43,0:37:36.88:37,0,289	0/1:13,0:11:83.48:83,0,99	0/0:19,0:18:37.24:0,37,422	1/1:20,0:15:18:215,18,0	0/1:9,4:12:0:0,0,0	0/0:12,0:11:17.33:0,17,110	0/0:15,0:14:19.90:0,20,118	0/0:13,0:9:11.90:0,12,95	0/0:20,0:20:27.11:0,27,652	0/0:20,0:20:48.06:0,48,895	1/1:10,10:20:26:288,26,0	0/1:21,0:17:91.36:109,0,91	0/0:9,0:8:13.89:0,14,76	0/0:9,0:9:0:0,0,0	0/0:44,0:36:14.62:0,15,152	0/0:12,0:9:17.28:0,17,270	0/0:9,0:7:17.98:0,18,332	0/0:58,0:57:64.67:0,65,2244	0/0:12,0:11:23.92:0,24,397	0/0:14,0:12:10.75:0,11,195	0/0:4,0:4:8.82:0,9,90	./.
chr10	85765716	.	CGT	C	368.74	PASS	AB=0.980;AC=14;AF=0.292;AN=48;BaseQRankSum=2.414;DP=475;FS=3.818;HRun=0;HaplotypeScore=110.4060;InbreedingCoeff=0.3363;MQ=48.39;MQ0=38;MQRankSum=0.387;QD=2.38;ReadPosRankSum=-0.467;VQSLOD=2.1153;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:39.11:0,39,460	./.	./.	0/0:7,0:1:3:0,3,26	./.	0/1:14,0:14:57.56:58,0,135	0/0:41,0:36:45.74:0,46,508	0/1:15,1:14:24.53:25,0,211	0/0:20,0:20:20.66:0,21,207	1/1:19,0:14:0.70:4,1,0	0/0:8,0:7:0:0,0,0	1/1:11,2:12:4.92:95,5,0	0/1:16,0:15:1.94:27,0,2	1/1:13,0:9:5.40:25,5,0	0/1:17,0:17:19.14:19,0,264	0/0:17,3:20:2.33:0,2,443	0/1:16,0:16:4.14:27,0,4	1/1:16,5:17:21.05:229,21,0	0/0:9,0:8:20.92:0,21,190	0/1:9,0:9:0:0,0,0	0/0:44,1:39:7.69:0,8,320	0/0:12,0:9:11.61:0,12,176	0/0:10,0:8:9.94:0,10,180	0/0:59,1:60:33.41:0,33,1101	0/0:16,0:15:21.01:0,21,271	0/0:13,0:12:11.90:0,12,183	0/0:6,0:6:12.03:0,12,143	./.
chr10	85766275	.	T	TTCACTCGC	13412.28	PASS	AB=0.963;AC=25;AF=0.446;AN=56;BaseQRankSum=-7.936;DP=538;FS=20.200;HRun=0;HaplotypeScore=125.3639;InbreedingCoeff=0.4753;MQ=47.74;MQ0=54;MQRankSum=-11.067;QD=48.42;ReadPosRankSum=6.868;VQSLOD=2.7501;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:25:43.70:1532,44,0	1/1:4,0:4:12.04:394,12,0	0/0:49,0:10:29.97:0,30,473	0/0:54,0:9:15.14:0,15,222	0/0:13,0:12:32.25:0,32,767	0/0:21,0:21:57.12:0,57,1358	1/1:13,0:12:20.80:656,21,0	0/1:24,0:22:10.86:1301,0,11	0/0:12,0:10:21.07:0,21,323	1/1:20,0:13:36.03:1079,36,0	1/1:15,0:13:36.10:1085,36,0	0/1:19,0:18:66.13:582,0,66	0/1:18,0:16:11.92:1103,0,12	0/1:13,0:12:91.14:453,0,91	0/0:19,0:17:33.88:0,34,655	0/0:21,0:19:37.09:0,37,792	1/1:13,0:11:30.57:995,31,0	0/0:9,0:8:9.50:0,10,247	1/1:17,0:13:12.80:728,13,0	0/1:17,9:21:51.72:458,0,52	0/1:10,0:10:10.73:270,0,11	0/0:6,0:6:18.06:0,18,493	0/0:14,0:10:26.37:0,26,611	0/0:22,0:20:44.87:0,45,1021	0/0:21,0:20:43.12:0,43,815	1/1:19,0:16:8.41:1244,8,0	0/1:23,0:19:9.83:1192,0,10	1/1:16,0:10:6.87:339,7,0
chr10	85766276	.	T	TCACTCGC	9531.49	PASS	AB=0.754;AC=22;AF=0.393;AN=56;BaseQRankSum=-9.959;DP=498;FS=123.352;HRun=0;HaplotypeScore=109.5104;InbreedingCoeff=0.2199;MQ=49.14;MQ0=55;MQRankSum=-8.559;QD=41.62;ReadPosRankSum=8.093;VQSLOD=1.6477;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,12:16:31.15:1121,31,0	1/1:0,3:3:9.03:297,9,0	0/0:51,0:10:30.08:0,30,521	0/0:54,0:9:14.80:0,15,238	0/0:14,0:13:35.50:0,35,795	0/0:22,0:22:57.19:0,57,1421	1/1:3,3:5:8.43:306,8,0	0/1:15,7:20:77.13:914,0,77	0/0:13,0:11:22.09:0,22,355	1/1:8,7:11:30:868,30,0	1/1:2,7:8:24.08:706,24,0	0/1:11,5:18:99:578,0,135	0/1:6,8:12:77.43:808,0,77	0/1:8,2:10:99:250,0,162	0/0:18,0:16:42.90:0,43,752	0/0:20,0:18:46.02:0,46,865	1/1:2,6:7:18.95:594,19,0	0/0:13,0:12:9.92:0,10,249	0/1:11,4:12:30.90:631,0,31	0/1:23,0:18:99:142,0,131	0/1:4,2:8:41.25:169,0,41	0/0:6,0:6:18.06:0,18,495	0/0:15,0:11:28.77:0,29,642	0/0:22,0:20:48.40:0,48,1112	0/0:21,0:20:49.06:0,49,894	0/1:8,8:13:41.33:926,0,41	0/1:10,9:16:58.10:1008,0,58	0/1:14,2:10:30.96:214,0,31
chr10	85766751	.	TA	T	955.56	PASS	AB=0.823;AC=32;AF=0.571;AN=56;BaseQRankSum=4.579;DP=403;FS=33.495;HRun=16;HaplotypeScore=50.5583;InbreedingCoeff=0.4676;MQ=74.52;MQ0=6;MQRankSum=0.644;QD=3.90;ReadPosRankSum=4.665;VQSLOD=-0.3963;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,12:24:18.51:101,19,0	1/1:3,0:6:6.96:29,7,0	0/0:27,1:8:1.52:0,2,6	0/0:24,0:11:5.19:0,5,28	0/1:10,0:11:0.38:0,0,80	0/0:17,1:18:15.97:0,16,212	0/1:9,4:17:1.90:72,0,2	0/1:19,2:21:14.50:14,0,47	0/0:16,0:16:20.92:0,21,169	1/1:8,0:21:22.27:65,22,0	1/1:5,0:8:4:12,4,0	1/1:11,6:18:18.82:112,19,0	1/1:0,4:4:2.94:18,3,0	0/1:3,2:5:14.17:27,0,14	0/0:15,2:18:8.94:0,9,179	0/0:17,0:17:21.83:0,22,173	1/1:6,0:15:21.23:70,21,0	1/1:3,13:19:32.70:180,33,0	1/1:7,6:14:19.21:111,19,0	1/1:3,6:10:7.57:33,8,0	1/1:5,4:9:5.77:36,6,0	0/0:7,0:7:5.99:0,6,48	0/1:8,0:8:13.82:30,0,14	0/0:11,0:11:11.92:0,12,89	0/0:15,3:19:8.16:0,8,184	1/1:8,3:14:20.62:102,21,0	0/1:7,10:17:6.36:86,0,6	1/1:1,2:4:7.89:42,8,0
chr10	85766855	.	AG	A	3214.55	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=7.767;DP=428;FS=4.352;HRun=9;HaplotypeScore=48.1193;InbreedingCoeff=0.9363;MQ=65.71;MQ0=0;MQRankSum=-1.926;QD=19.25;ReadPosRankSum=-0.033;VQSLOD=3.6564;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:26:38.53:0,39,658	1/1:1,1:2:3:27,3,0	0/0:8,0:5:6.02:0,6,70	0/0:10,0:10:16.26:0,16,161	0/0:11,0:11:30.09:0,30,346	0/0:21,0:21:54.09:0,54,588	0/0:24,0:24:63.17:0,63,716	1/1:5,16:21:39:352,39,0	0/0:12,0:12:30.09:0,30,346	1/1:1,16:17:45:406,45,0	1/1:1,7:8:18.01:165,18,0	0/0:9,0:20:23.20:0,23,156	0/0:2,0:8:14.37:0,14,92	0/0:10,0:12:23.22:0,23,168	0/0:16,0:16:33.09:0,33,372	0/0:17,0:17:39.09:0,39,432	1/1:2,30:33:83.08:747,83,0	0/0:26,1:27:44.71:0,45,753	1/1:4,14:18:33.01:302,33,0	1/1:3,8:11:26.88:234,27,0	1/1:1,29:30:72.03:654,72,0	0/0:8,0:8:18.04:0,18,198	0/0:9,0:9:24.07:0,24,277	0/0:20,0:20:51.15:0,51,589	0/0:12,0:12:30.09:0,30,346	1/1:2,9:11:26.99:241,27,0	1/1:2,10:12:27.01:247,27,0	1/1:0,4:4:6:55,6,0
chr10	85767192	.	AT	A	92.75	PASS	AB=0.855;AC=8;AF=0.143;AN=56;BaseQRankSum=-2.228;DP=444;FS=3.428;HRun=17;HaplotypeScore=101.0103;InbreedingCoeff=-0.0306;MQ=53.04;MQ0=28;MQRankSum=6.178;QD=0.74;ReadPosRankSum=3.635;VQSLOD=-0.4506;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:29.16:0,29,112	0/0:4,0:3:2.99:0,3,24	0/1:16,0:4:2.22:2,0,31	0/0:11,0:3:0:0,0,0	0/1:13,5:19:12.95:13,0,160	0/0:16,0:16:12.36:0,12,103	0/0:14,0:9:6.57:0,7,30	0/0:12,0:17:15.88:0,16,95	0/1:13,0:13:2.63:3,0,91	0/1:11,1:13:5.71:6,0,69	0/1:8,2:7:19.19:19,0,36	0/0:18,0:17:37:0,37,190	0/0:10,0:10:20.51:0,21,107	0/0:10,0:4:11.62:0,12,68	0/1:17,1:19:8.30:8,0,163	0/0:8,0:6:14.86:0,15,108	0/0:35,1:36:22.62:0,23,370	0/1:12,11:21:13.78:148,0,14	0/0:24,0:21:26.22:0,26,141	0/0:14,0:15:26.42:0,26,146	0/0:7,0:5:0:0,0,0	0/1:6,1:7:4.96:5,0,48	0/0:9,0:9:17.96:0,18,143	0/0:16,0:15:27.24:0,27,198	0/0:13,2:15:6.88:0,7,126	0/0:17,0:15:22.35:0,22,113	0/0:13,0:16:20.19:0,20,111	0/0:18,0:19:38.50:0,38,197
chr10	85767308	.	TA	T	6075.67	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=9.231;DP=456;FS=1.275;HRun=7;HaplotypeScore=46.6236;InbreedingCoeff=0.9656;MQ=68.81;MQ0=2;MQRankSum=0.715;QD=22.59;ReadPosRankSum=0.402;VQSLOD=4.2221;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:93.20:943,93,0	1/1:3,3:6:6.01:61,6,0	0/0:18,1:8:11.17:0,11,118	0/0:13,0:6:12.39:0,12,105	0/0:20,0:20:60.16:0,60,717	0/0:20,1:21:29.64:0,30,654	1/1:1,9:10:24.05:244,24,0	1/1:1,22:23:62.96:602,63,0	0/0:7,0:7:15.04:0,15,175	1/1:0,16:16:48.09:482,48,0	1/1:3,11:14:32.94:301,33,0	1/1:1,18:19:30.06:305,30,0	1/1:1,6:7:15.03:153,15,0	1/1:1,7:8:21.04:213,21,0	0/0:12,0:12:33.06:0,33,391	0/0:17,0:17:45.08:0,45,506	1/1:2,30:32:66.14:669,66,0	0/0:26,0:25:69.21:0,69,839	1/1:3,12:14:36.03:346,36,0	1/1:0,10:10:20.94:199,21,0	1/1:0,9:9:12.02:120,12,0	0/0:12,0:12:33.09:0,33,398	0/0:15,0:15:36.08:0,36,420	0/0:11,0:11:30.07:0,30,357	0/0:12,0:11:27.07:0,27,321	1/1:1,15:16:42.04:411,42,0	1/1:3,24:27:57.10:572,57,0	1/1:2,17:19:45.09:457,45,0
chr10	85768271	.	T	TG	8904.01	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-12.967;DP=581;FS=6.690;HRun=2;HaplotypeScore=53.5064;InbreedingCoeff=0.9970;MQ=85.97;MQ0=0;MQRankSum=-1.494;QD=38.88;ReadPosRankSum=-1.401;VQSLOD=4.6653;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.24:0,90,1080	1/1:0,8:8:24.08:343,24,0	0/0:19,0:19:54.16:0,54,651	0/0:17,0:18:29.78:0,30,467	0/0:16,0:16:48.12:0,48,569	0/0:18,0:18:51.16:0,51,625	0/0:23,0:23:69.22:0,69,855	1/1:1,18:19:51.12:693,51,0	0/0:25,0:25:75.17:0,75,887	1/1:1,18:19:54.13:737,54,0	1/1:0,13:13:33.07:445,33,0	0/0:32,0:32:96.27:0,96,1164	0/0:26,0:26:75.22:0,75,916	0/0:24,0:24:72.13:0,72,859	0/0:16,0:16:42.09:0,42,503	0/0:27,0:27:72.22:0,72,892	1/1:0,42:42:99:1727,120,0	0/0:20,0:20:57.18:0,57,705	1/1:3,20:23:60.20:861,60,0	1/1:0,18:18:51.17:728,51,0	1/1:1,38:39:99:1463,102,0	0/0:12,0:12:36.11:0,36,446	0/0:8,0:8:24.07:0,24,286	0/0:22,0:22:60.19:0,60,741	0/0:16,0:16:48.15:0,48,595	1/1:0,22:22:66.20:921,66,0	1/1:2,19:21:54.18:768,54,0	1/1:0,5:5:15.05:216,15,0
chr10	85768592	.	GCCCCC	G	6989.42	PASS	AC=22;AF=0.423;AN=52;BaseQRankSum=-0.044;DP=419;FS=21.672;HRun=13;HaplotypeScore=110.1009;InbreedingCoeff=0.9561;MQ=65.40;MQ0=1;MQRankSum=-8.438;QD=30.39;ReadPosRankSum=1.657;VQSLOD=1.9036;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:13:15.05:0,15,257	1/1:1,7:8:18.05:309,18,0	0/0:4,0:3:6.02:0,6,102	0/0:16,0:16:23.10:0,23,433	./.	0/0:12,0:15:36.12:0,36,855	0/0:7,0:20:41.81:0,42,644	1/1:12,31:43:85.77:1449,86,0	0/0:14,0:14:24.08:0,24,601	1/1:2,10:12:30.07:514,30,0	1/1:2,14:16:24.04:380,24,0	0/0:3,0:22:33.48:0,33,199	0/0:6,0:17:21.09:0,21,102	0/0:3,0:15:18.27:0,18,130	0/0:7,0:7:21.07:0,21,571	0/0:7,0:8:24.08:0,24,606	1/1:7,18:25:45:739,45,0	0/0:3,0:14:33.10:0,33,519	1/1:12,14:26:41.93:690,42,0	1/1:2,9:11:21.04:359,21,0	1/1:9,27:36:45.45:687,45,0	./.	0/0:4,0:4:9.03:0,9,233	0/0:11,0:11:24.08:0,24,605	0/0:6,0:8:15.05:0,15,325	1/1:7,21:28:63.12:1021,63,0	1/1:4,18:22:42.05:688,42,0	1/1:0,3:3:9.03:154,9,0
chr10	85768757	.	C	CT	820.50	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=1.025;DP=500;FS=10.484;HRun=11;HaplotypeScore=53.6625;InbreedingCoeff=0.8187;MQ=60.10;MQ0=5;MQRankSum=-0.557;QD=13.91;ReadPosRankSum=-1.060;VQSLOD=2.3884;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:66.96:0,67,511	0/0:11,0:12:25.91:0,26,189	0/0:10,0:4:2.96:0,3,20	0/1:10,0:9:1.94:2,0,57	0/0:23,0:22:50.46:0,50,390	0/0:11,0:11:23.91:0,24,186	0/0:22,1:23:23.34:0,23,364	0/0:27,1:28:19.74:0,20,312	0/0:13,0:13:29.39:0,29,216	0/0:25,1:27:38.53:0,39,460	0/0:13,1:14:23.87:0,24,186	1/1:8,15:23:27.36:445,27,0	1/1:2,14:16:33.07:335,33,0	1/1:4,5:10:20.68:180,21,0	0/0:9,0:9:23.90:0,24,185	0/0:17,0:17:44.82:0,45,348	0/0:34,0:34:74.66:0,75,579	0/0:21,0:20:47.33:0,47,356	0/0:15,1:15:8.39:0,8,242	0/0:18,0:18:41.80:0,42,321	0/0:12,0:12:20.91:0,21,163	0/0:14,0:14:27.59:0,28,211	0/0:10,0:11:23.90:0,24,186	0/0:18,0:19:43.67:0,44,317	0/0:20,0:21:52.08:0,52,380	0/0:12,0:15:31.85:0,32,223	0/0:25,0:24:58.88:0,59,438	0/0:19,0:19:35.81:0,36,277
chr10	85768924	.	TGTAA	T	5853.21	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.833;DP=611;FS=8.284;HRun=0;HaplotypeScore=113.9341;InbreedingCoeff=0.9958;MQ=87.57;MQ0=0;MQRankSum=-4.064;QD=47.98;ReadPosRankSum=2.343;VQSLOD=5.7398;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:66.18:1204,66,0	0/0:7,0:7:18.06:0,18,493	0/0:24,0:25:72.25:0,72,1780	0/0:25,0:25:69.24:0,69,1731	0/0:15,0:15:42.14:0,42,1140	0/0:19,0:19:54.17:0,54,1419	1/1:2,32:34:87.30:1663,87,0	0/0:28,0:28:84.29:0,84,2245	0/0:23,0:23:69.24:0,69,1878	0/0:25,0:25:72.25:0,72,1944	0/0:12,0:12:33.11:0,33,903	1/1:0,22:22:63.22:1218,63,0	1/1:1,18:19:48.16:914,48,0	1/1:2,15:17:45.15:854,45,0	0/0:24,0:24:72.25:0,72,1972	0/0:18,0:18:54.19:0,54,1457	0/0:35,0:35:99:0,102,2749	0/0:37,0:37:99:0,108,2924	0/0:25,0:25:66.23:0,66,1701	0/0:13,0:13:36.11:0,36,884	0/0:49,0:49:99:0,144,3769	0/0:12,0:12:36.11:0,36,928	0/0:10,0:10:27.07:0,27,679	0/0:28,0:28:81.28:0,81,2198	0/0:14,0:14:42.14:0,42,1128	0/0:28,0:28:84.29:0,84,2251	0/0:11,0:11:33.11:0,33,904	0/0:6,0:6:18.06:0,18,471
chr10	85770276	.	GC	G	5322.99	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.734;DP=661;FS=1.119;HRun=3;HaplotypeScore=63.3573;InbreedingCoeff=0.9982;MQ=58.25;MQ0=9;MQRankSum=-0.004;QD=33.90;ReadPosRankSum=-1.601;VQSLOD=4.6198;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,1809	0/0:7,0:7:18.06:0,18,258	0/0:28,0:9:27.09:0,27,373	0/0:41,0:13:33.11:0,33,458	0/0:28,0:28:81.26:0,81,1145	0/0:21,0:21:60.20:0,60,864	0/0:27,0:27:81.27:0,81,1159	1/1:0,28:28:84.24:1014,84,0	0/0:20,0:20:60.20:0,60,864	0/0:28,0:28:81.27:0,81,1163	0/0:15,0:14:39.09:0,39,538	0/0:13,0:13:39.13:0,39,562	0/0:18,0:18:54.18:0,54,778	0/0:28,0:28:84.27:0,84,1193	0/0:17,0:17:48.16:0,48,690	0/0:24,0:24:69.23:0,69,994	0/0:29,0:29:87.28:0,87,1234	0/0:29,0:29:81.25:0,81,1130	1/1:0,22:22:58.07:709,58,0	1/1:2,21:23:60.19:743,60,0	1/1:0,23:23:69.22:856,69,0	0/0:26,0:26:75.25:0,75,1079	0/0:25,0:25:72.24:0,72,1030	0/0:21,0:21:60.15:0,60,822	0/0:16,0:16:48.16:0,48,691	1/1:2,24:26:32.03:849,32,0	1/1:0,21:21:54.17:670,54,0	1/1:0,14:14:39.12:484,39,0
chr10	85770337	.	T	TA	2546.14	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.650;DP=665;FS=0.443;HRun=7;HaplotypeScore=68.0075;InbreedingCoeff=0.9986;MQ=72.18;MQ0=0;MQRankSum=-0.041;QD=28.93;ReadPosRankSum=-1.125;VQSLOD=3.7670;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,1112	1/1:0,8:8:21.06:254,21,0	0/0:19,0:18:41.99:0,42,385	0/0:15,0:15:29.15:0,29,282	0/0:33,0:33:81.12:0,81,782	0/0:25,0:25:69.11:0,69,666	0/0:27,0:27:75.10:0,75,718	0/0:31,0:31:66.04:0,66,625	0/0:20,0:20:57.07:0,57,545	1/1:4,30:34:93.28:1121,93,0	1/1:0,15:15:42.09:491,42,0	0/0:22,0:22:66.11:0,66,637	0/0:24,0:24:66.10:0,66,637	0/0:29,0:29:81.13:0,81,782	0/0:16,0:16:42.05:0,42,400	0/0:23,0:23:60.09:0,60,579	1/1:5,26:31:46.25:841,46,0	0/0:24,0:24:47.97:0,48,443	0/0:24,0:24:56.68:0,57,532	0/0:20,0:20:54.08:0,54,521	0/0:24,0:24:69.11:0,69,666	0/0:22,0:22:66.11:0,66,637	0/0:20,0:20:51.08:0,51,492	0/0:20,0:20:57.07:0,57,544	0/0:23,0:23:63.09:0,63,604	0/0:27,1:28:44.87:0,45,711	0/0:26,0:26:69.09:0,69,660	0/0:20,0:20:54.08:0,54,521
chr10	85771942	.	GGCTGCT	G	3230.05	PASS	AC=12;AF=0.429;AN=28;BaseQRankSum=6.733;DP=457;FS=8.124;HRun=0;HaplotypeScore=91.7645;InbreedingCoeff=0.8725;MQ=65.31;MQ0=9;MQRankSum=-10.162;QD=22.91;ReadPosRankSum=0.369;VQSLOD=2.1024;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:5,0:5:6.01:0,6,122	0/0:13,0:8:3.01:0,3,33	./.	./.	./.	0/0:20,0:37:39.13:0,39,1006	./.	0/0:21,0:21:45.12:0,45,1272	./.	./.	1/1:16,20:36:39.13:795,39,0	1/1:9,12:21:36.12:734,36,0	1/1:15,18:35:45.11:838,45,0	0/0:22,0:23:39.07:0,39,1043	0/0:20,0:21:42.08:0,42,1201	0/0:19,0:19:48.16:0,48,1441	1/1:12,18:30:27.09:550,27,0	./.	./.	./.	./.	./.	0/0:34,0:35:72.18:0,72,2145	./.	./.	1/1:6,7:15:21.07:390,21,0	1/1:4,0:4:3.01:61,3,0
chr10	85772250	.	CG	C	3558.41	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=0.861;DP=523;FS=0.000;HRun=5;HaplotypeScore=65.9172;InbreedingCoeff=0.9452;MQ=85.86;MQ0=1;MQRankSum=-0.153;QD=27.16;ReadPosRankSum=4.534;VQSLOD=3.5447;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,30:36:56.49:674,56,0	0/0:11,0:11:30.06:0,30,372	0/0:16,0:16:38.88:0,39,427	0/0:20,0:20:51.02:0,51,606	0/0:4,0:4:9.02:0,9,106	0/0:16,0:16:42.10:0,42,520	1/1:2,31:33:87.25:986,87,0	0/0:10,0:10:27.06:0,27,321	0/0:25,0:25:63.18:0,63,828	0/0:19,0:19:51.03:0,51,584	0/0:3,0:3:6.01:0,6,66	1/1:0,25:25:69.20:781,69,0	1/1:0,17:17:45.13:509,45,0	1/1:2,18:20:54.15:608,54,0	0/0:27,0:26:74.86:0,75,950	0/0:9,0:9:27.08:0,27,352	0/0:28,0:28:84.25:0,84,1115	0/0:24,0:24:66.22:0,66,900	0/0:20,0:20:51.09:0,51,643	0/0:5,0:5:15:0,15,166	0/0:48,0:48:99:0,117,1414	0/0:13,0:13:30.06:0,30,387	0/0:5,0:5:12.04:0,12,163	0/0:34,0:34:99:0,99,1244	0/0:12,0:12:36.05:0,36,422	0/0:17,0:16:39.03:0,39,445	0/0:22,0:22:57.09:0,57,698	0/0:4,0:4:12.04:0,12,161
chr10	85772565	.	TCA	T	423.03	PASS	AB=0.976;AC=14;AF=0.333;AN=42;BaseQRankSum=-0.406;DP=415;FS=1.930;HRun=0;HaplotypeScore=89.7977;InbreedingCoeff=0.2830;MQ=53.64;MQ0=9;MQRankSum=1.912;QD=2.52;ReadPosRankSum=1.944;VQSLOD=2.0213;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:18.03:0,18,213	./.	./.	./.	0/0:7,0:7:2.60:0,3,23	./.	0/1:31,0:32:99:105,0,127	0/0:9,0:9:5.93:0,6,50	0/0:10,0:10:9.03:0,9,131	1/1:14,0:13:0.39:2,0,0	./.	1/1:19,5:24:0.02:173,0,0	1/1:5,4:9:2.60:32,3,0	1/1:10,6:16:8.90:96,9,0	0/0:9,0:9:3.48:0,3,45	0/0:12,0:11:18.06:0,18,265	1/1:10,9:20:8.86:78,9,0	0/0:16,0:16:23.93:0,24,203	0/0:9,0:9:11.83:0,12,78	0/0:11,0:11:6.01:0,6,66	0/0:27,0:26:8.51:0,9,74	0/1:14,0:15:10.99:11,0,19	./.	0/1:26,1:28:51.84:52,0,277	0/1:10,0:10:3.84:4,0,60	0/0:13,0:11:23.95:0,24,240	0/0:17,0:17:24.65:0,25,203	./.
chr10	85774127	.	TAA	T	2894.09	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-2.849;DP=497;FS=0.857;HRun=3;HaplotypeScore=73.9678;InbreedingCoeff=0.8851;MQ=68.35;MQ0=11;MQRankSum=0.705;QD=17.86;ReadPosRankSum=0.335;VQSLOD=0.8838;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:84.95:0,85,806	0/1:10,0:10:7.85:97,0,8	0/0:29,0:20:50.23:0,50,542	0/0:24,0:18:44.13:0,44,452	0/0:16,0:16:42.03:0,42,430	0/0:12,0:12:17.96:0,18,181	0/0:19,0:19:47.95:0,48,417	1/1:25,0:24:54.43:555,54,0	0/0:12,0:12:33.48:0,33,346	1/1:21,0:21:41.75:394,42,0	1/1:7,0:7:5.65:44,6,0	0/0:19,0:19:41.81:0,42,328	0/0:9,0:8:16.09:0,16,122	0/0:20,0:20:42.94:0,43,345	0/0:26,0:26:71.23:0,71,810	0/0:19,0:18:46.65:0,47,615	1/1:13,0:13:29.17:228,29,0	0/0:12,0:11:18.81:0,19,172	1/1:16,1:18:50.98:513,51,0	1/1:9,0:10:26.96:233,27,0	1/1:22,0:20:41.87:350,42,0	0/0:15,0:15:14.48:0,14,386	0/0:13,0:13:32.96:0,33,419	0/0:40,0:40:66.74:0,67,970	0/0:17,0:17:34.23:0,34,401	1/1:12,5:17:47.29:417,47,0	1/1:12,0:12:32.03:231,32,0	1/1:0,7:7:3.01:46,3,0
chr10	85774129	.	AACACACAC	A	537.18	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=3.593;DP=533;FS=3.047;HRun=0;HaplotypeScore=142.2702;InbreedingCoeff=0.6892;MQ=65.60;MQ0=14;MQRankSum=-5.257;QD=10.53;ReadPosRankSum=-2.224;VQSLOD=2.1994;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:39.13:0,39,1171	0/0:12,0:12:11.16:0,11,332	./.	./.	0/0:19,0:19:21.05:0,21,639	0/0:6,0:13:6.02:0,6,228	0/0:20,0:20:2.16:0,2,22	0/0:29,0:27:19.85:0,20,338	0/0:12,0:12:21.01:0,21,577	0/0:21,0:21:21.11:0,21,385	0/0:9,0:8:3.01:0,3,58	1/1:12,9:21:11.78:297,12,0	1/1:4,5:8:6.02:150,6,0	1/1:15,6:20:9.03:211,9,0	0/0:28,0:28:42.14:0,42,1276	0/0:19,0:19:26.79:0,27,918	0/0:14,0:14:15.05:0,15,351	0/0:15,0:14:20.28:0,20,517	0/0:18,0:18:12.91:0,13,338	0/0:11,0:11:6.02:0,6,105	0/0:25,0:23:12:0,12,236	0/0:17,0:17:29.32:0,29,940	0/0:12,0:12:24.08:0,24,766	0/0:43,0:45:57.17:0,57,1859	0/0:16,0:18:30.10:0,30,769	0/0:17,0:17:19.81:0,20,347	0/0:11,0:11:12:0,12,163	0/0:10,0:9:9.03:0,9,245
chr10	85776242	.	C	CGAGAGCA	5488.19	PASS	AB=0.958;AC=9;AF=0.161;AN=56;BaseQRankSum=4.280;DP=648;FS=1.785;HRun=0;HaplotypeScore=156.5451;InbreedingCoeff=0.8656;MQ=87.53;MQ0=0;MQRankSum=-9.601;QD=53.28;ReadPosRankSum=-0.087;VQSLOD=4.7828;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,132,3232	1/1:4,12:16:33.11:1276,33,0	0/0:31,0:31:63.18:0,63,1352	0/0:30,0:30:24.90:0,25,1070	0/0:19,0:19:54.17:0,54,1283	0/0:26,0:26:60.21:0,60,1487	0/0:30,0:30:72.21:0,72,1681	0/0:24,0:24:60.20:0,60,1440	0/0:24,0:24:57.20:0,57,1373	1/1:11,12:25:57.10:1836,57,0	1/1:6,11:19:27.02:1041,27,0	0/0:27,0:27:66.23:0,66,1632	0/0:22,0:22:57.20:0,57,1400	0/0:28,0:28:81.28:0,81,2004	0/0:27,0:27:72.25:0,72,1777	0/0:18,0:18:45.15:0,45,1086	1/1:8,12:20:33.11:1276,33,0	0/0:15,0:15:39.13:0,39,967	0/0:9,0:9:21.07:0,21,490	0/0:14,0:14:36.12:0,36,892	0/0:42,0:42:99:0,105,2547	0/0:14,0:14:27.09:0,27,669	0/0:20,0:20:51.14:0,51,1203	0/0:20,0:20:54.19:0,54,1307	0/0:19,0:19:51.16:0,51,1216	0/1:22,1:23:59.06:59,0,1182	0/0:20,0:20:51.18:0,51,1264	0/0:14,0:14:42.14:0,42,1008
chr10	85777472	.	CT	C	1185.73	PASS	AB=0.817;AC=34;AF=0.607;AN=56;BaseQRankSum=4.887;DP=320;FS=2.783;HRun=14;HaplotypeScore=47.2338;InbreedingCoeff=0.3735;MQ=77.00;MQ0=0;MQRankSum=1.255;QD=5.81;ReadPosRankSum=1.122;VQSLOD=1.9155;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:53.95:0,54,469	1/1:1,0:2:2.03:6,2,0	0/0:19,0:14:1.05:0,1,70	0/0:12,1:9:2.68:0,3,26	0/1:15,2:17:7.68:8,0,212	0/0:19,2:21:21.43:0,21,330	0/0:5,0:6:5.17:0,5,78	1/1:18,9:27:6.35:130,6,0	0/1:8,1:9:29.29:29,0,87	1/1:2,0:9:14.24:41,14,0	1/1:3,0:12:3.53:24,4,0	1/1:1,2:3:2.94:21,3,0	1/1:3,4:7:8.15:60,8,0	1/1:2,5:7:14.85:103,15,0	0/1:7,1:8:2.49:2,0,114	0/1:3,1:4:11.58:12,0,43	1/1:4,0:20:24.43:70,24,0	0/0:14,1:16:8.65:0,9,193	1/1:7,14:21:32.58:226,33,0	1/1:2,8:11:25.79:170,26,0	1/1:2,1:3:2.96:21,3,0	0/1:1,1:2:14.57:15,0,22	0/0:6,0:6:5.96:0,6,47	0/1:4,2:6:18.98:32,0,19	0/0:10,0:10:18.01:0,18,164	1/1:7,11:18:28.68:191,29,0	1/1:2,6:8:11.88:82,12,0	1/1:2,6:8:17.84:123,18,0
chr10	85777788	.	TCCAC	T	3646.24	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.554;DP=694;FS=2.254;HRun=0;HaplotypeScore=120.0221;InbreedingCoeff=0.9915;MQ=74.67;MQ0=1;MQRankSum=-2.152;QD=45.58;ReadPosRankSum=3.008;VQSLOD=4.5325;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,3105	0/0:5,0:5:15.05:0,15,411	0/0:20,0:20:57.20:0,57,1428	0/0:21,0:20:54.14:0,54,1284	0/0:25,0:25:72.25:0,72,1888	0/0:19,0:19:57.18:0,57,1496	0/0:40,0:40:99:0,114,3113	0/0:36,0:36:99:0,105,2701	0/0:20,0:20:51.65:0,52,1345	0/0:30,0:30:87.29:0,87,2311	0/0:18,0:18:54.17:0,54,1410	1/1:4,29:33:81.13:1477,81,0	1/1:2,24:26:63.22:1219,63,0	1/1:2,19:21:51.17:951,51,0	0/0:24,0:24:66.23:0,66,1808	0/0:21,0:21:57.20:0,57,1463	0/0:32,0:32:93.32:0,93,2522	0/0:25,0:25:72.25:0,72,1972	0/0:22,0:22:60.20:0,60,1607	0/0:20,0:20:60.21:0,60,1641	0/0:49,0:49:99:0,138,3758	0/0:24,0:24:72.25:0,72,1944	0/0:22,0:22:63.22:0,63,1680	0/0:32,0:32:96.31:0,96,2508	0/0:20,0:20:60.21:0,60,1639	0/0:19,0:19:54.14:0,54,1362	0/0:24,0:24:72.23:0,72,1862	0/0:6,0:6:18.06:0,18,492
chr10	85782608	.	TGAGA	T	4272.71	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=7.913;DP=652;FS=6.722;HRun=0;HaplotypeScore=167.9694;InbreedingCoeff=0.8417;MQ=53.67;MQ0=15;MQRankSum=-6.656;QD=14.05;ReadPosRankSum=-4.328;VQSLOD=3.3292;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:34.88:0,35,543	1/1:1,3:5:6.02:101,6,0	0/0:43,0:14:18.93:0,19,433	0/1:38,0:22:23.23:23,0,262	0/0:17,0:19:47.95:0,48,1135	0/0:21,0:20:45.14:0,45,1073	0/0:27,0:26:43.37:0,43,674	1/1:16,12:27:33.10:536,33,0	0/0:18,0:18:35.91:0,36,811	1/1:8,15:21:45.15:767,45,0	1/1:12,13:25:15.03:224,15,0	1/1:14,9:25:8.98:151,9,0	1/1:7,8:16:17.68:303,18,0	1/1:4,7:14:11.87:130,12,0	0/0:36,0:38:99:0,105,2321	0/0:41,0:43:98.68:0,99,2159	1/1:8,9:18:11.26:201,11,0	0/0:16,0:14:21.96:0,22,358	1/1:10,11:20:30.01:452,30,0	1/1:9,10:18:8.70:135,9,0	1/1:5,14:19:15:254,15,0	0/0:20,1:22:2.64:0,3,1062	0/0:23,0:23:41.93:0,42,985	0/0:34,2:36:78.03:0,78,1828	0/0:14,0:14:27.09:0,27,676	1/1:8,9:17:33.08:513,33,0	1/1:13,10:23:24.05:382,24,0	1/1:3,2:5:6.02:102,6,0
chr10	85782623	.	G	GAGAC	3080.50	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=-2.505;DP=593;FS=10.995;HRun=0;HaplotypeScore=152.8526;InbreedingCoeff=0.3647;MQ=62.77;MQ0=11;MQRankSum=-1.389;QD=10.96;ReadPosRankSum=-6.304;VQSLOD=-0.3886;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:28:4.24:740,4,0	1/1:4,0:4:2.48:13,2,0	0/0:47,0:28:43.28:0,43,633	0/0:48,0:26:18.92:0,19,295	0/0:18,0:18:48.16:0,48,830	0/0:17,0:17:48.13:0,48,804	1/1:3,18:21:39.13:954,39,0	0/1:18,0:18:48.51:163,0,49	0/0:17,0:17:42.08:0,42,612	0/1:19,0:19:42.58:43,0,57	1/1:19,0:19:6.32:91,6,0	1/1:16,0:16:10.78:90,11,0	0/1:11,0:11:7.72:39,0,8	1/1:14,0:14:12.44:108,12,0	0/0:42,0:42:99:0,114,1779	0/0:38,0:38:99:0,99,1535	0/1:14,0:14:2.02:28,0,2	1/1:2,14:14:18.06:473,18,0	0/1:18,0:16:29.59:65,0,30	1/1:19,0:18:20.33:143,20,0	1/1:24,0:24:0.21:85,0,0	0/0:24,0:24:63.09:0,63,912	0/0:15,0:15:35.04:0,35,681	0/0:34,0:34:84.23:0,84,1397	0/0:11,0:11:33.04:0,33,510	0/1:19,0:18:54.04:122,0,54	0/1:15,0:15:9.59:98,0,10	0/1:3,0:3:15.35:15,0,19
chr10	85783034	.	C	CAG	381.66	PASS	AB=0.563;AC=1;AF=0.018;AN=56;BaseQRankSum=-2.536;DP=574;FS=2.524;HRun=0;HaplotypeScore=80.6653;InbreedingCoeff=0.5294;MQ=72.56;MQ0=4;MQRankSum=-0.130;QD=21.20;ReadPosRankSum=0.941;VQSLOD=3.7397;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:35:96.13:0,96,1147	0/0:7,0:7:12.04:0,12,148	0/0:25,0:18:20.91:0,21,207	0/0:37,0:29:23.47:0,23,303	0/0:20,0:20:39.12:0,39,479	0/0:20,0:20:48.14:0,48,578	0/0:23,0:23:54.17:0,54,658	0/0:36,0:36:60.17:0,60,718	0/0:12,0:12:33.10:0,33,406	0/0:16,0:16:39.11:0,39,459	0/0:18,0:18:42.13:0,42,517	0/0:13,0:13:39.11:0,39,468	0/0:9,0:9:24.08:0,24,295	0/0:12,0:12:30.08:0,30,357	0/0:22,0:23:50.99:0,51,604	0/0:11,0:11:32.31:0,32,376	0/0:34,0:34:90.28:0,90,1107	0/1:4,12:18:1.64:456,0,2	0/0:19,0:18:45.12:0,45,529	0/0:27,0:27:51.16:0,51,627	0/0:29,0:29:87.23:0,87,1041	0/0:24,0:24:63.18:0,63,761	0/0:8,0:8:18.03:0,18,192	0/0:21,0:21:35.99:0,36,541	0/0:16,0:16:42.13:0,42,516	0/0:22,0:22:54.14:0,54,649	0/0:22,0:21:63.20:0,63,771	0/0:17,0:17:45.12:0,45,539
chr10	85783224	.	TACAC	T	349.94	PASS	AC=16;AF=0.889;AN=18;DP=492;FS=0.000;HRun=0;HaplotypeScore=88.9070;MQ=60.86;MQ0=18;QD=2.71;VQSLOD=1.0793;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:13,1:14:6.02:90,6,0	0/0:22,0:22:0:0,0,0	./.	./.	1/1:16,3:19:6.02:90,6,0	./.	./.	./.	1/1:11,0:13:0.89:2,1,0	./.	1/1:21,0:23:3:28,3,0	./.	./.	./.	1/1:17,0:17:3:28,3,0	./.	./.	1/1:9,2:11:3.90:47,4,0	./.	1/1:20,2:22:9.03:134,9,0	1/1:7,0:7:0.89:2,1,0	./.	./.	./.
chr10	85784897	.	G	GTATT	11238.64	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-9.794;DP=680;FS=1.111;HRun=0;HaplotypeScore=104.9106;InbreedingCoeff=0.9992;MQ=78.21;MQ0=0;MQRankSum=-4.821;QD=47.82;ReadPosRankSum=2.074;VQSLOD=5.6725;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:34:66.10:1587,66,0	1/1:0,8:8:20.84:566,21,0	0/0:21,0:21:50.86:0,51,757	0/0:37,0:37:92.62:0,93,1230	0/0:22,0:22:60.19:0,60,1074	0/0:31,0:31:93.26:0,93,1600	1/1:2,28:30:48.04:1106,48,0	0/0:30,0:30:78.24:0,78,1370	0/0:31,0:31:87.28:0,87,1609	1/1:3,19:24:63.18:1430,63,0	1/1:0,17:18:39.06:884,39,0	1/1:2,18:22:32.96:815,33,0	1/1:3,24:27:50.98:1307,51,0	1/1:2,22:25:60.08:1430,60,0	0/0:23,0:23:66.17:0,66,1122	0/0:18,0:18:54.17:0,54,950	1/1:3,23:27:44.13:1203,44,0	1/1:1,18:20:36.08:910,36,0	0/0:19,0:19:57.16:0,57,944	0/0:13,0:13:39.13:0,39,738	0/0:36,0:36:99:0,102,1861	0/0:24,0:24:60.17:0,60,1010	0/0:15,0:15:36.11:0,36,601	0/0:39,0:39:99:0,111,1892	0/0:16,0:16:42.13:0,42,742	0/0:30,0:30:59.24:0,59,1490	0/0:16,0:16:36.07:0,36,567	0/0:24,0:24:60.21:0,60,1114
chr10	85785257	.	TAAAAAAAAGATTTATTTTTTGTTCGGTCCCCAGCTCCAAAAA	T	245.22	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=-0.035;DP=241;FS=4.447;HRun=0;HaplotypeScore=226.9400;InbreedingCoeff=0.4533;MQ=73.10;MQ0=6;MQRankSum=-0.914;QD=24.52;ReadPosRankSum=0.571;VQSLOD=2.0408;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,6:8:3.01:232,3,0	./.	0/0:17,0:8:21.06:0,21,538	0/0:16,0:8:15.84:0,16,360	0/0:22,0:22:54.15:0,54,6815	0/0:12,0:12:33.09:0,33,3699	1/1:0,0:2:6.02:109,6,0	0/0:15,0:13:39.13:0,39,1849	0/0:4,0:4:12.01:0,12,1038	0/0:6,0:6:15.05:0,15,1474	0/0:4,0:4:6.02:0,6,730	0/0:3,0:2:2.97:0,3,21	0/0:1,0:2:5.99:0,6,328	0/0:4,0:4:6.02:0,6,422	0/0:7,0:7:21.01:0,21,1720	0/0:5,0:5:15.02:0,15,1673	0/0:19,0:19:54.17:0,54,3821	0/0:9,0:9:15.03:0,15,902	0/0:25,0:20:48.12:0,48,3361	0/0:4,0:4:9.03:0,9,1224	0/0:1,0:1:3.01:0,3,99	0/0:2,0:2:3.01:0,3,407	0/0:3,0:3:3.01:0,3,337	0/0:7,0:8:24.07:0,24,3178	0/0:9,0:9:24.08:0,24,2971	0/0:9,0:9:18.03:0,18,1621	0/0:9,0:9:18.06:0,18,1652	0/0:14,0:14:36.07:0,36,3299
chr10	85785264	.	AAG	A	65.18	PASS	AB=0.851;AC=9;AF=0.173;AN=52;BaseQRankSum=5.579;DP=237;FS=22.959;HRun=0;HaplotypeScore=50.5578;InbreedingCoeff=-0.0344;MQ=80.44;MQ0=5;MQRankSum=-2.125;QD=1.30;ReadPosRankSum=-0.010;VQSLOD=-0.1606;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:22,0:11:19.75:0,20,225	0/0:17,0:9:5.43:0,5,46	0/0:20,0:20:54.17:0,54,921	0/1:11,1:12:3.67:4,0,503	0/0:2,0:2:6.01:0,6,62	0/0:16,0:15:45.14:0,45,753	0/1:3,1:4:25.92:26,0,133	0/0:6,0:6:15.05:0,15,264	0/0:3,0:3:6.02:0,6,107	1/1:2,1:2:3.01:37,3,0	0/1:1,1:2:8.04:31,0,8	0/0:3,0:3:6.01:0,6,62	0/1:7,2:9:47.45:47,0,257	0/1:6,0:6:0.46:0,0,214	0/0:18,0:18:51.17:0,51,882	0/1:6,1:7:22.37:22,0,164	0/0:25,1:20:16.24:0,16,833	0/0:4,0:4:12.03:0,12,188	0/0:1,0:1:3.01:0,3,53	0/0:1,0:1:3.01:0,3,54	0/0:3,0:3:6.01:0,6,79	0/0:8,0:8:12.20:0,12,339	0/0:9,0:9:27.08:0,27,415	0/1:6,1:7:19.16:19,0,250	0/0:8,0:8:21:0,21,279	0/0:14,0:14:36.11:0,36,608
chr10	85785271	.	A	AT	780.33	PASS	AB=0.978;AC=10;AF=0.200;AN=50;BaseQRankSum=-0.435;DP=236;FS=26.361;HRun=6;HaplotypeScore=48.9856;InbreedingCoeff=0.6207;MQ=83.31;MQ0=6;MQRankSum=-4.230;QD=13.69;ReadPosRankSum=0.417;VQSLOD=1.3258;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:23,0:13:31.29:0,31,272	0/1:19,0:12:20.08:20,0,21	0/0:18,0:18:51.04:0,51,499	0/0:12,0:12:30.06:0,30,304	0/1:2,0:2:0:0,0,0	0/0:15,0:14:30.07:0,30,306	0/0:4,0:4:9.02:0,9,92	1/1:0,6:6:15.05:187,15,0	1/1:1,2:3:6.02:75,6,0	./.	0/0:2,0:2:3:0,3,30	0/0:4,0:4:3.89:0,4,32	0/0:9,0:9:21:0,21,203	0/0:6,0:6:15.02:0,15,153	1/1:3,14:17:42.05:492,42,0	1/1:2,5:7:12.04:151,12,0	0/0:24,0:20:45.10:0,45,458	0/0:7,0:6:18.04:0,18,188	0/0:2,0:1:3:0,3,29	0/0:1,0:1:3.01:0,3,31	0/0:3,0:3:6.01:0,6,61	0/0:8,0:8:24.05:0,24,244	0/0:9,0:9:26.90:0,27,242	0/0:7,0:7:12.02:0,12,122	0/0:8,0:8:17.93:0,18,169	0/0:8,0:8:24.04:0,24,238
chr10	85785294	.	C	CAAAAAAAAA	3774.62	PASS	AB=1.000;AC=28;AF=0.560;AN=50;BaseQRankSum=3.357;DP=266;FS=0.770;HRun=14;HaplotypeScore=87.4818;InbreedingCoeff=0.6889;MQ=71.69;MQ0=10;MQRankSum=-5.377;QD=24.51;ReadPosRankSum=-3.812;VQSLOD=-0.6223;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:7:3.01:74,3,0	1/1:1,0:2:3.01:123,3,0	0/0:30,0:12:5.54:0,6,124	0/1:33,0:14:26.06:26,0,55	0/0:17,0:17:38.90:0,39,888	0/0:11,0:10:17.87:0,18,410	./.	1/1:11,0:10:14.54:298,15,0	0/0:5,0:5:8.77:0,9,193	1/1:7,0:8:15.05:415,15,0	1/1:8,0:9:8.98:257,9,0	./.	1/1:3,1:3:6.02:250,6,0	0/1:5,0:5:0:1,0,0	0/0:8,0:7:11.81:0,12,275	0/0:5,0:5:8.88:0,9,155	1/1:13,0:13:15:363,15,0	1/1:7,0:7:12.04:496,12,0	1/1:12,1:12:6.02:233,6,0	1/1:7,2:9:15.05:362,15,0	./.	0/0:3,0:3:9.03:0,9,200	0/0:5,0:5:12.01:0,12,275	0/0:12,0:12:26.71:0,27,603	0/0:11,0:11:6.80:0,7,562	1/1:7,0:8:12.03:348,12,0	1/1:4,3:9:18.02:484,18,0	1/1:9,0:9:5.97:45,6,0
chr10	85786100	.	GACTT	G	10841.69	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=16.527;DP=630;FS=3.700;HRun=0;HaplotypeScore=112.2339;InbreedingCoeff=0.9988;MQ=84.95;MQ0=0;MQRankSum=-7.365;QD=49.06;ReadPosRankSum=3.766;VQSLOD=5.4245;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,48:50:99:2255,117,0	1/1:1,5:6:18.06:349,18,0	0/0:18,0:18:53.83:0,54,1261	0/0:25,0:25:70.47:0,70,1730	0/0:24,0:24:72.23:0,72,1879	0/0:18,0:18:54.19:0,54,1444	1/1:1,24:25:63.22:1220,63,0	0/0:28,0:28:78.27:0,78,2081	0/0:19,0:19:51.17:0,51,1310	1/1:0,17:17:51.17:988,51,0	1/1:1,14:15:39.13:753,39,0	1/1:1,21:22:56.83:1091,57,0	1/1:2,19:22:57.20:1104,57,0	1/1:0,20:20:54.19:1046,54,0	0/0:17,0:17:51.18:0,51,1363	0/0:26,0:26:78.27:0,78,2103	1/1:4,22:26:60.21:1162,60,0	1/1:1,17:18:45.15:872,45,0	0/0:27,0:27:81.28:0,81,2211	0/0:17,0:17:51.18:0,51,1390	0/0:34,0:34:99:0,102,2746	0/0:16,0:16:48.16:0,48,1314	0/0:18,0:18:54.19:0,54,1467	0/0:37,1:38:53.21:0,53,2821	0/0:14,0:14:42.13:0,42,1054	0/0:30,0:30:90.31:0,90,2466	0/0:22,0:22:66.23:0,66,1697	0/0:18,0:18:54.19:0,54,1455
chr10	85786647	.	T	TA	1440.26	PASS	AB=0.937;AC=25;AF=0.446;AN=56;BaseQRankSum=4.244;DP=451;FS=2.292;HRun=13;HaplotypeScore=68.8970;InbreedingCoeff=0.6913;MQ=79.19;MQ0=0;MQRankSum=-2.714;QD=6.08;ReadPosRankSum=-1.810;VQSLOD=2.1221;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,33:43:52.95:502,53,0	1/1:4,2:11:17.62:123,18,0	0/0:20,0:20:19.15:0,19,140	0/0:12,0:11:9.70:0,10,52	0/0:11,0:13:27.86:0,28,176	0/1:8,3:11:7.11:7,0,98	1/1:6,15:21:18.46:313,18,0	0/0:20,0:23:32.70:0,33,195	0/0:21,0:21:37.91:0,38,261	1/1:6,0:15:26.75:143,27,0	1/1:2,0:5:8.74:52,9,0	1/1:3,0:12:8.52:43,9,0	1/1:3,0:11:8.41:53,8,0	1/1:5,0:12:11.74:79,12,0	0/1:15,0:17:0.02:0,0,125	0/1:15,0:16:2.10:2,0,122	1/1:6,2:34:42.92:238,43,0	1/1:2,0:13:14.26:74,14,0	0/0:15,0:15:26.56:0,27,177	0/0:14,0:15:16.82:0,17,108	0/0:10,0:14:21.85:0,22,135	0/0:15,0:17:28.67:0,29,189	0/0:8,0:8:14.81:0,15,103	0/0:22,0:24:28.40:0,28,292	0/0:12,0:12:22.78:0,23,149	0/0:20,0:20:26.17:0,26,180	0/1:6,0:7:12.22:12,0,36	0/1:7,1:9:1.99:2,0,124
chr10	85786796	.	C	CCA	1943.26	PASS	AB=0.708;AC=25;AF=0.463;AN=54;BaseQRankSum=-1.114;DP=596;FS=26.870;HRun=0;HaplotypeScore=94.3661;InbreedingCoeff=0.6219;MQ=60.66;MQ0=13;MQRankSum=-2.468;QD=7.90;ReadPosRankSum=-0.286;VQSLOD=1.5782;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:36:8.45:51,8,0	0/0:13,0:13:30.09:0,30,338	./.	0/0:25,1:8:2.94:0,3,18	0/1:13,1:16:12.87:13,0,275	0/0:25,1:27:41.53:0,42,444	1/1:14,0:27:8.61:47,9,0	1/1:22,0:22:21:243,21,0	0/0:20,0:21:41.90:0,42,429	0/0:23,0:24:44.69:0,45,483	0/0:16,0:19:23.70:0,24,212	1/1:11,0:16:5.98:48,6,0	1/1:5,0:19:8.82:58,9,0	1/1:2,0:16:5.85:34,6,0	0/0:23,0:28:50.81:0,51,534	0/0:19,0:22:47.79:0,48,493	0/0:36,0:34:65.26:0,65,659	1/1:8,0:16:3:25,3,0	1/1:7,4:10:11.83:144,12,0	0/1:4,6:10:74.26:242,0,74	0/1:3,13:16:6.33:339,0,6	0/0:21,0:22:35.76:0,36,361	0/0:13,0:17:38.77:0,39,399	0/0:36,0:40:85.72:0,86,911	0/0:21,1:24:3.35:0,3,350	1/1:3,8:12:16.50:376,16,0	1/1:5,8:13:1.37:242,1,0	1/1:2,9:11:18.06:275,18,0
chr10	85786986	.	C	CTTTA	15842.27	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-14.654;DP=644;FS=7.341;HRun=0;HaplotypeScore=97.7001;InbreedingCoeff=0.9963;MQ=63.41;MQ0=1;MQRankSum=-1.811;QD=64.40;ReadPosRankSum=2.357;VQSLOD=7.2065;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:37:87.26:2229,87,0	1/1:0,7:7:18.06:479,18,0	0/0:23,0:22:54.18:0,54,958	0/0:16,0:15:39.11:0,39,683	0/0:16,0:16:48.13:0,48,833	0/0:26,0:26:66.23:0,66,1231	1/1:6,13:20:45.15:1117,45,0	0/0:18,0:18:48.16:0,48,895	0/0:23,0:23:63.20:0,63,1143	1/1:4,20:24:69.24:1766,69,0	1/1:2,12:14:36.12:893,36,0	1/1:4,22:26:62.59:1671,63,0	1/1:3,17:21:57.20:1479,57,0	1/1:3,24:29:75.26:1969,75,0	0/0:35,0:35:99:0,99,1784	0/0:20,0:20:57.20:0,57,1064	1/1:1,46:48:99:2879,108,0	1/1:3,17:20:51.18:1360,51,0	0/0:19,0:18:51.17:0,51,944	0/0:13,0:13:36.12:0,36,672	0/0:37,0:37:99:0,108,1984	0/0:22,0:22:60.21:0,60,1119	0/0:14,0:14:39.13:0,39,728	0/0:40,0:40:99:0,111,2029	0/0:12,0:12:30.10:0,30,560	0/0:34,0:34:54.46:0,54,1641	0/0:23,0:23:63.22:0,63,1168	0/0:6,0:6:15.05:0,15,280
chr10	85788863	.	GT	G	493.42	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.302;DP=589;FS=8.902;HRun=2;HaplotypeScore=102.4158;InbreedingCoeff=0.8660;MQ=74.19;MQ0=0;MQRankSum=-6.675;QD=10.50;ReadPosRankSum=-3.973;VQSLOD=-0.1276;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:81.81:0,82,659	1/1:2,2:4:8.89:61,9,0	0/0:12,0:12:33.08:0,33,424	0/0:21,0:20:1.27:0,1,394	0/0:18,0:18:54.18:0,54,788	0/0:16,0:16:48.09:0,48,627	0/0:34,0:34:83.73:0,84,657	0/0:21,0:21:47.82:0,48,804	0/0:16,0:16:48.15:0,48,690	1/1:13,8:21:46.95:352,47,0	1/1:0,7:7:1.94:8,2,0	0/0:27,0:27:65.55:0,66,510	0/0:31,0:31:74.70:0,75,579	0/0:20,0:20:58.31:0,58,440	0/0:15,0:15:45.14:0,45,648	0/0:13,0:13:39.13:0,39,584	1/1:6,9:15:32.04:214,32,0	0/0:28,0:28:53.89:0,54,493	0/0:14,0:14:42.12:0,42,559	0/0:15,0:15:45.14:0,45,651	0/0:55,0:55:99:0,156,2205	0/0:20,0:20:57.19:0,57,838	0/0:16,0:16:48.16:0,48,713	0/0:29,0:29:87.24:0,87,1255	0/0:16,0:16:48.15:0,48,693	0/0:30,0:30:84.18:0,84,1206	0/0:19,0:19:57.19:0,57,845	0/0:14,0:14:42.14:0,42,628
chr10	85788865	.	T	TC	5065.19	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=13.158;DP=592;FS=1.628;HRun=6;HaplotypeScore=88.7889;InbreedingCoeff=0.7875;MQ=73.41;MQ0=0;MQRankSum=0.844;QD=22.51;ReadPosRankSum=4.038;VQSLOD=4.2656;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,38:43:84.27:1054,84,0	0/0:4,0:4:3.63:0,4,10	0/0:12,0:12:32.94:0,33,303	0/1:20,0:19:5.59:6,0,229	0/0:18,0:18:54.12:0,54,548	0/0:16,0:16:42.05:0,42,412	1/1:6,27:33:69.22:867,69,0	0/0:20,0:21:53.11:0,53,510	0/0:16,0:16:45.10:0,45,458	0/1:21,0:21:6.20:6,0,23	0/0:7,0:7:1.81:0,2,5	1/1:3,25:28:56.97:717,57,0	1/1:2,28:30:72.22:892,72,0	1/1:1,20:21:57.18:717,57,0	0/0:16,0:16:39.08:0,39,397	0/0:13,0:13:39.09:0,39,398	0/0:15,0:15:9.45:0,9,32	1/1:2,27:29:66.04:806,66,0	0/0:14,0:14:33.03:0,33,320	0/0:15,0:15:42.09:0,42,428	0/0:55,0:55:99:0,141,1419	0/0:21,0:21:60.12:0,60,603	0/0:17,0:17:48.07:0,48,475	0/0:29,0:29:84.18:0,84,850	0/0:16,0:16:45.10:0,45,455	0/0:29,0:29:75.16:0,75,763	0/0:19,0:19:57.13:0,57,581	0/0:14,0:14:42.09:0,42,428
chr10	85788870	.	CCA	C	596.46	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.752;DP=589;FS=0.712;HRun=0;HaplotypeScore=114.5056;InbreedingCoeff=0.9624;MQ=73.37;MQ0=0;MQRankSum=-6.233;QD=11.70;ReadPosRankSum=-3.759;VQSLOD=2.9382;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:87.45:0,87,649	1/1:2,2:4:9.01:85,9,0	0/0:15,0:15:41.70:0,42,615	0/0:17,0:16:15.67:0,16,409	0/0:18,0:18:54.18:0,54,886	0/0:15,0:15:45.14:0,45,736	0/0:30,0:30:74.15:0,74,557	0/0:22,0:22:59.58:0,60,716	0/0:16,0:16:48.16:0,48,800	1/1:14,8:22:38.69:329,39,0	1/1:7,2:9:8.98:76,9,0	0/0:28,0:28:64.98:0,65,479	0/0:29,0:29:71.13:0,71,487	0/0:21,0:21:56.25:0,56,385	0/0:15,0:15:42.11:0,42,669	0/0:14,0:14:42.04:0,42,674	1/1:11,5:16:27.80:258,28,0	0/0:29,0:29:68.25:0,68,496	0/0:13,0:13:37.87:0,38,488	0/0:15,0:15:45.13:0,45,698	0/0:53,0:53:99:0,150,2398	0/0:22,0:22:63.18:0,63,1003	0/0:17,0:17:51.11:0,51,735	0/0:29,0:29:87.26:0,87,1407	0/0:16,0:16:48.13:0,48,715	0/0:29,0:29:78.21:0,78,1255	0/0:19,0:19:57.20:0,57,961	0/0:14,0:14:42.12:0,42,682
chr10	85788871	.	CA	C	495.64	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.399;DP=589;FS=0.000;HRun=1;HaplotypeScore=105.0297;InbreedingCoeff=0.9046;MQ=72.69;MQ0=0;MQRankSum=-6.221;QD=10.77;ReadPosRankSum=-3.749;VQSLOD=0.1977;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:65.86:0,66,291	1/1:4,0:4:8.95:69,9,0	0/0:14,0:14:41.70:0,42,497	0/0:17,0:16:1.05:0,1,330	0/0:19,0:19:57.15:0,57,703	0/0:15,0:15:45.13:0,45,581	0/0:31,0:31:63.27:0,63,273	0/0:24,0:24:55.27:0,55,581	0/0:16,0:16:48.14:0,48,619	1/1:16,2:18:38.57:273,39,0	1/1:7,0:7:8.90:69,9,0	0/0:27,0:27:55.45:0,55,254	0/0:27,0:28:53.76:0,54,187	0/0:21,0:21:41.78:0,42,146	0/0:14,0:14:42.10:0,42,516	0/0:14,0:14:42.03:0,42,529	1/1:14,3:17:32.73:235,33,0	0/0:29,0:29:54.93:0,55,225	0/0:13,0:13:37.86:0,38,410	0/0:15,0:15:45.11:0,45,550	0/0:53,0:53:99:0,153,1883	0/0:22,0:22:63.17:0,63,790	0/0:19,0:19:50.40:0,50,553	0/0:30,0:30:90.21:0,90,1124	0/0:17,0:17:48.02:0,48,543	0/0:30,0:30:81.18:0,81,1014	0/0:20,0:20:60.18:0,60,773	0/0:14,0:14:42.12:0,42,537
chr10	85789044	.	GGTGTTGCCT	G	2140.53	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.311;DP=665;FS=0.673;HRun=0;HaplotypeScore=182.1807;InbreedingCoeff=0.9899;MQ=85.53;MQ0=0;MQRankSum=-5.502;QD=38.92;ReadPosRankSum=0.127;VQSLOD=3.3964;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,3920	1/1:4,8:12:14.95:299,15,0	0/0:24,0:24:66.10:0,66,2183	0/0:22,0:22:59.93:0,60,2009	0/0:16,0:16:42.09:0,42,1343	0/0:12,0:12:33.11:0,33,1572	0/0:32,0:32:90.27:0,90,3734	0/0:24,0:24:66.18:0,66,2267	0/0:30,0:30:78.25:0,78,3395	1/1:0,17:17:45.05:1012,45,0	1/1:1,10:11:16.87:451,17,0	0/0:31,0:31:90.26:0,90,3796	0/0:30,0:30:83.63:0,84,3640	0/0:15,0:15:45.10:0,45,1619	0/0:27,0:27:75.24:0,75,3274	0/0:19,0:19:54.18:0,54,2350	1/1:2,13:15:17.63:535,18,0	0/0:23,0:23:63.20:0,63,2636	0/0:19,0:19:42.07:0,42,1314	0/0:14,0:14:39.04:0,39,1495	0/0:76,0:76:99:0,220,8265	0/0:26,0:26:77.90:0,78,2669	0/0:20,0:20:60.11:0,60,2226	0/0:34,0:34:99:0,99,4193	0/0:18,0:18:45.62:0,46,1899	0/0:31,0:31:90.30:0,90,3983	0/0:19,0:19:57.14:0,57,2308	0/0:13,0:13:39.10:0,39,1596
chr10	85790879	.	AG	A	2359.11	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.685;DP=549;FS=2.839;HRun=2;HaplotypeScore=82.3776;InbreedingCoeff=0.9944;MQ=80.24;MQ0=2;MQRankSum=-5.604;QD=32.77;ReadPosRankSum=-0.023;VQSLOD=3.4458;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1556	1/1:0,8:8:21.07:272,21,0	0/0:36,1:32:61.22:0,61,1224	0/0:32,1:27:21.71:0,22,921	0/0:17,0:17:51.17:0,51,764	0/0:14,0:14:42.13:0,42,609	0/0:19,0:19:54.18:0,54,801	0/0:41,0:41:99:0,114,1683	0/0:15,0:15:45.15:0,45,673	1/1:1,21:22:63.20:818,63,0	1/1:1,12:13:32.88:425,33,0	0/0:11,0:11:30.10:0,30,442	0/0:16,0:16:45.15:0,45,655	0/0:15,0:15:36.04:0,36,492	0/0:19,0:19:57.19:0,57,854	0/0:15,0:15:45.15:0,45,669	1/1:0,29:29:78.25:1004,78,0	0/0:14,0:14:36.12:0,36,538	0/0:28,0:28:81.26:0,81,1178	0/0:15,0:15:45.14:0,45,655	0/0:32,0:32:87.29:0,87,1301	0/0:8,0:8:24.08:0,24,360	0/0:9,0:9:27.09:0,27,402	0/0:12,0:12:33.09:0,33,472	0/0:16,0:16:45.15:0,45,674	0/0:23,0:23:66.22:0,66,976	0/0:25,0:25:75.24:0,75,1101	0/0:6,0:6:18.06:0,18,266
chr10	85790903	.	GCTCTCTCT	G	733.36	PASS	AB=0.922;AC=17;AF=0.315;AN=54;BaseQRankSum=5.964;DP=513;FS=8.658;HRun=0;HaplotypeScore=151.0646;InbreedingCoeff=0.5293;MQ=62.32;MQ0=19;MQRankSum=-3.047;QD=4.53;ReadPosRankSum=1.094;VQSLOD=2.2002;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:33:6.53:7,0,313	1/1:4,1:5:3.01:75,3,0	./.	0/1:33,0:17:0:0,0,0	0/0:16,0:16:12.04:0,12,401	0/0:15,0:15:21.05:0,21,702	0/1:11,0:14:6.79:7,0,38	0/0:27,0:25:8.94:0,9,100	0/0:19,0:19:33.10:0,33,1237	1/1:10,3:14:12.04:284,12,0	1/1:8,1:9:0.47:1,0,0	1/1:10,0:10:1.31:14,1,0	1/1:13,0:14:0:124,0,0	0/0:13,0:13:3.01:0,3,35	0/0:17,0:19:15.05:0,15,454	0/0:17,0:17:27.08:0,27,866	1/1:16,4:21:15.05:363,15,0	0/0:15,0:15:27.09:0,27,830	0/0:22,0:23:27.07:0,27,785	0/0:19,0:17:7.98:0,8,48	0/0:23,0:22:8.23:0,8,167	1/1:8,0:7:0.89:2,1,0	0/0:11,0:14:8.92:0,9,309	0/0:14,0:13:18.06:0,18,630	0/0:17,0:17:14.89:0,15,494	0/0:28,0:27:39.07:0,39,1165	0/0:24,0:27:39.15:0,39,1286	0/0:11,0:9:15.01:0,15,337
chr10	85790942	.	CTCTCTT	C	933.97	PASS	AB=0.938;AC=16;AF=0.286;AN=56;BaseQRankSum=6.728;DP=509;FS=8.261;HRun=0;HaplotypeScore=152.6862;InbreedingCoeff=0.3985;MQ=52.09;MQ0=16;MQRankSum=-4.286;QD=4.43;ReadPosRankSum=-2.959;VQSLOD=1.2447;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:42:99:247,0,109	1/1:4,0:3:3.01:42,3,0	0/1:25,0:12:2.93:3,0,130	0/1:17,0:3:0.38:0,0,17	0/0:25,0:25:55.80:0,56,733	0/0:16,0:16:42.09:0,42,871	0/1:20,0:20:30.55:55,0,31	0/0:19,0:18:15.30:0,15,102	0/0:23,0:23:59.81:0,60,1338	1/1:15,0:13:11.99:169,12,0	1/1:18,0:18:0.26:1,0,0	1/1:13,0:13:8.11:115,8,0	1/1:15,1:16:15.14:231,15,0	0/1:6,9:14:3.56:4,0,12	0/0:15,0:15:41.81:0,42,621	0/0:18,0:18:42.11:0,42,1007	0/1:26,0:26:24.48:222,0,24	0/0:21,0:21:22.02:0,22,446	0/0:17,0:16:44.14:0,44,565	0/0:17,0:16:13.69:0,14,104	0/0:12,0:9:7.12:0,7,78	0/0:8,0:8:12.65:0,13,180	0/0:13,0:13:20.94:0,21,469	0/0:12,0:11:30.01:0,30,531	0/0:11,0:11:3.90:0,4,459	0/0:32,0:31:77.48:0,77,1068	0/0:25,0:24:35.23:0,35,870	0/0:14,0:13:19.69:0,20,261
chr10	85790944	.	CTCTT	C	1027.43	PASS	AB=0.990;AC=18;AF=0.321;AN=56;BaseQRankSum=6.620;DP=509;FS=5.427;HRun=0;HaplotypeScore=142.3249;InbreedingCoeff=0.4934;MQ=53.68;MQ0=12;MQRankSum=-4.000;QD=4.43;ReadPosRankSum=-2.019;VQSLOD=1.9675;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:41,1:42:30.04:436,30,0	1/1:4,0:3:3:28,3,0	0/1:25,0:13:0.81:1,0,131	0/1:15,0:3:0.38:0,0,16	0/0:26,0:26:56.44:0,56,584	0/0:16,0:16:39.08:0,39,625	0/1:21,0:21:19.57:69,0,20	0/0:19,0:18:12.30:0,12,79	0/0:22,0:22:59.81:0,60,1035	1/1:16,0:14:11.93:112,12,0	1/1:19,0:19:0.25:0,0,0	1/1:10,3:13:17.08:207,17,0	1/1:15,0:15:16.24:180,16,0	0/1:14,1:14:3.19:3,0,9	0/0:15,0:15:38.76:0,39,460	0/0:16,0:16:42.07:0,42,737	0/1:26,0:26:23.32:150,0,23	0/1:21,0:21:6.66:7,0,241	0/0:17,0:16:41.16:0,41,378	0/0:17,0:16:13.69:0,14,85	0/0:11,0:9:5.04:0,5,33	0/0:8,0:8:12.90:0,13,128	0/0:12,0:12:20.79:0,21,239	0/0:12,0:11:29.94:0,30,381	0/0:12,0:12:11.28:0,11,336	0/0:34,0:33:81.80:0,82,769	0/0:26,0:25:36.55:0,37,555	0/0:14,0:13:19.67:0,20,170
chr10	85790948	.	T	TTCTGTG	4677.19	PASS	AB=0.943;AC=16;AF=0.286;AN=56;BaseQRankSum=3.155;DP=513;FS=15.881;HRun=0;HaplotypeScore=150.2039;InbreedingCoeff=0.3440;MQ=54.06;MQ0=12;MQRankSum=-2.058;QD=21.16;ReadPosRankSum=-0.107;VQSLOD=3.4574;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:80.55:0,81,360	0/1:4,0:3:2.35:28,0,2	0/0:26,0:13:10.40:0,10,367	0/0:17,0:4:8.82:0,9,137	0/0:27,0:27:61.01:0,61,1235	0/0:16,0:16:39.13:0,39,871	0/0:22,0:22:22.20:0,22,177	0/1:22,0:21:6.10:607,0,6	0/0:22,0:22:54.19:0,54,1192	1/1:16,0:14:14.46:345,14,0	1/1:20,0:20:11.77:168,12,0	0/0:13,0:13:16.04:0,16,112	0/0:15,0:15:26:0,26,181	0/0:14,0:13:5.43:0,5,16	0/0:15,0:15:32.90:0,33,743	0/0:16,0:16:39.13:0,39,843	0/1:22,0:26:11.84:309,0,12	0/1:19,0:19:46.05:109,0,46	0/1:9,5:16:69.97:457,0,70	1/1:14,0:14:17.65:248,18,0	1/1:10,0:8:14.32:341,14,0	0/0:8,0:8:12.57:0,13,271	0/0:13,0:13:23.78:0,24,411	0/0:12,0:11:24:0,24,418	0/0:15,0:15:36.08:0,36,624	0/1:35,0:34:55.69:1122,0,56	0/1:24,0:23:77.28:248,0,77	0/1:13,0:13:5.81:693,0,6
chr10	85790950	.	C	CTGTGTG	7733.78	PASS	AB=0.695;AC=28;AF=0.500;AN=56;BaseQRankSum=1.411;DP=534;FS=1.044;HRun=0;HaplotypeScore=151.3529;InbreedingCoeff=0.6852;MQ=58.34;MQ0=12;MQRankSum=-5.232;QD=23.87;ReadPosRankSum=-2.851;VQSLOD=4.2391;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:41:3.91:36,0,4	1/1:4,0:3:5.51:60,6,0	0/0:27,0:16:16.56:0,17,416	0/0:21,0:7:12.34:0,12,169	0/0:28,0:28:61.07:0,61,1217	0/0:15,0:15:39.13:0,39,803	0/1:7,0:21:22.79:23,0,85	1/1:21,0:21:48.14:1029,48,0	0/0:22,0:22:57.18:0,57,1155	1/1:17,0:15:40.92:624,41,0	1/1:21,0:21:12.04:266,12,0	0/0:4,0:13:2.23:0,2,45	0/1:9,0:15:2.83:3,0,52	1/1:14,0:14:0.73:6,1,0	0/0:15,0:15:36.08:0,36,733	0/0:15,0:15:39.11:0,39,757	1/1:26,0:26:43.71:554,44,0	0/1:4,0:20:5.93:195,0,6	1/1:20,1:21:41.17:950,41,0	1/1:4,11:16:21.07:424,21,0	1/1:12,0:10:15.05:456,15,0	0/0:8,0:8:12.57:0,13,259	0/0:15,0:15:20.77:0,21,408	0/0:13,0:12:24.06:0,24,398	0/0:16,0:16:33.09:0,33,616	1/1:14,20:35:70.46:1728,70,0	1/1:13,9:23:22.85:410,23,0	1/1:13,0:13:30.10:970,30,0
chr10	85792377	.	C	CA	3572.52	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.348;DP=718;FS=3.793;HRun=2;HaplotypeScore=131.2791;InbreedingCoeff=0.9998;MQ=78.08;MQ0=0;MQRankSum=-11.839;QD=38.83;ReadPosRankSum=-1.727;VQSLOD=2.7140;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,114,1391	1/1:2,10:12:33.11:473,33,0	0/0:21,0:20:54.13:0,54,639	0/0:22,0:21:42.28:0,42,557	0/0:23,0:23:69.18:0,69,839	0/0:20,0:20:60.17:0,60,730	0/0:21,0:21:48.14:0,48,583	0/0:22,0:22:63.20:0,63,782	0/0:30,0:30:90.25:0,90,1089	1/1:0,28:28:84.28:1209,84,0	1/1:2,14:16:42.10:581,42,0	0/0:23,0:23:63.20:0,63,781	0/0:22,0:22:45.13:0,45,545	0/0:28,0:28:75.22:0,75,917	0/0:34,0:34:93.26:0,93,1124	0/0:27,0:27:78.24:0,78,955	1/1:7,29:36:96.19:1310,96,0	0/0:26,0:26:69.18:0,69,838	0/0:23,0:23:63.17:0,63,748	0/0:27,0:27:78.25:0,78,967	0/0:43,0:42:99:0,111,1348	0/0:26,0:26:75.24:0,75,929	0/0:22,0:22:57.18:0,57,705	0/0:34,0:34:96.28:0,96,1177	0/0:22,0:22:63.11:0,63,761	0/0:30,0:30:87.27:0,87,1069	0/0:25,0:24:66.21:0,66,818	0/0:12,0:12:33.10:0,33,409
chr10	85792393	.	C	CAG	21682.84	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-13.200;DP=759;FS=4.580;HRun=0;HaplotypeScore=96.1861;InbreedingCoeff=0.9999;MQ=82.88;MQ0=1;MQRankSum=-4.566;QD=47.34;ReadPosRankSum=2.830;VQSLOD=5.7219;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,46:49:99:2358,126,0	1/1:0,15:15:42.14:781,42,0	0/0:23,0:23:69.10:0,69,909	0/0:25,0:25:47.74:0,48,778	0/0:26,0:26:72.14:0,72,955	0/0:25,0:25:75.22:0,75,1058	1/1:0,22:22:57.20:1067,57,0	1/1:0,20:22:66.20:1168,66,0	0/0:31,0:31:90.25:0,90,1247	1/1:5,21:26:72.23:1269,72,0	1/1:0,15:15:30.10:559,30,0	1/1:3,22:26:57.19:1048,57,0	1/1:2,20:22:48.14:895,48,0	1/1:2,21:23:57.20:1067,57,0	0/0:30,0:30:90.30:0,90,1325	0/0:30,0:30:84.28:0,84,1234	1/1:4,23:27:57.19:1045,57,0	1/1:2,22:24:66.23:1236,66,0	1/1:2,24:27:72.25:1338,72,0	1/1:1,33:33:87.30:1629,87,0	1/1:0,45:45:99:2135,114,0	0/0:28,0:28:75.24:0,75,1081	0/0:22,0:22:59.99:0,60,826	0/0:41,0:40:99:0,120,1723	0/0:20,0:20:57.19:0,57,838	1/1:3,34:37:99:1902,105,0	1/1:0,29:29:78.27:1457,78,0	1/1:0,14:14:39.13:730,39,0
chr10	85793233	.	A	AAC	2133.35	PASS	AB=0.694;AC=35;AF=0.625;AN=56;BaseQRankSum=9.181;DP=577;FS=5.484;HRun=0;HaplotypeScore=154.3045;InbreedingCoeff=0.8056;MQ=65.96;MQ0=6;MQRankSum=-8.965;QD=6.48;ReadPosRankSum=-2.135;VQSLOD=2.4049;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:47,0:44:17.67:141,18,0	1/1:7,0:7:14.95:120,15,0	0/0:45,0:30:38.91:0,39,390	0/0:36,0:29:16.26:0,16,285	0/0:26,0:26:54.16:0,54,643	0/0:20,0:20:53.94:0,54,577	1/1:25,0:25:17.16:111,17,0	1/1:18,0:15:26.80:238,27,0	0/0:27,0:30:57.01:0,57,657	1/1:16,0:16:20.63:186,21,0	1/1:14,0:14:5.59:50,6,0	1/1:16,0:16:11.74:87,12,0	1/1:9,0:9:6:51,6,0	1/1:12,0:12:8.97:75,9,0	0/0:22,0:25:50.81:0,51,553	0/0:16,0:16:39.10:0,39,452	1/1:26,0:26:8.98:72,9,0	1/1:13,0:14:14.99:127,15,0	1/1:23,0:21:14.84:129,15,0	1/1:8,0:8:3:26,3,0	1/1:21,0:20:5.94:41,6,0	0/0:18,0:18:45.08:0,45,501	0/0:10,0:10:24.07:0,24,286	0/1:14,10:25:99:414,0,314	0/0:17,0:20:41.89:0,42,443	1/1:18,0:17:22.79:217,23,0	1/1:18,0:17:23.98:213,24,0	1/1:10,0:10:5.99:49,6,0
chr10	85794467	.	C	CTT	2937.76	PASS	AB=0.912;AC=22;AF=0.393;AN=56;BaseQRankSum=12.042;DP=616;FS=6.568;HRun=10;HaplotypeScore=86.0173;InbreedingCoeff=0.8741;MQ=68.36;MQ0=1;MQRankSum=1.081;QD=11.34;ReadPosRankSum=1.626;VQSLOD=1.3962;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:34:67.47:238,67,0	1/1:4,4:9:14.54:188,15,0	0/0:15,0:15:32.79:0,33,304	0/1:9,0:7:3:3,0,69	0/0:25,0:26:69.11:0,69,694	0/0:22,0:22:54.09:0,54,548	1/1:2,1:21:45.31:193,45,0	0/0:23,0:23:57.12:0,57,580	0/0:20,0:22:50.82:0,51,500	1/1:4,12:17:39:515,39,0	1/1:1,19:20:51:660,51,0	1/1:4,0:28:56.14:196,56,0	1/1:7,0:21:37.31:130,37,0	1/1:3,1:19:34.99:156,35,0	0/0:22,0:22:60.11:0,60,604	0/0:21,0:21:57.11:0,57,572	1/1:4,21:27:53.15:734,53,0	1/1:3,0:21:23.69:128,24,0	0/0:32,0:34:67.90:0,68,702	0/0:35,0:35:90.08:0,90,961	0/0:17,0:17:32.97:0,33,322	0/0:15,0:15:42.06:0,42,415	0/0:25,0:25:66.12:0,66,663	0/0:19,0:19:57.11:0,57,572	0/0:16,0:16:42.08:0,42,427	0/1:29,3:32:14.25:14,0,627	0/0:30,0:30:78.13:0,78,785	0/0:15,0:15:36.04:0,36,366
chr10	85794853	.	GTT	G	5190.54	PASS	AB=0.805;AC=26;AF=0.464;AN=56;BaseQRankSum=8.415;DP=683;FS=12.445;HRun=13;HaplotypeScore=101.3982;InbreedingCoeff=0.8567;MQ=68.32;MQ0=5;MQRankSum=-2.671;QD=14.07;ReadPosRankSum=2.337;VQSLOD=2.5019;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:29:62.77:643,63,0	0/0:3,0:12:20.68:0,21,199	0/1:43,1:24:18.04:18,0,208	0/0:32,0:19:35.43:0,35,330	0/0:27,0:27:73.94:0,74,986	0/0:17,0:18:47.63:0,48,641	1/1:3,21:27:71.06:629,71,0	1/1:10,20:30:40.62:528,41,0	0/0:29,0:29:78.20:0,78,1061	0/0:15,0:28:54.09:0,54,544	0/0:8,0:20:43.95:0,44,379	1/1:5,0:24:38.14:165,38,0	1/1:1,0:20:43.29:183,43,0	1/1:1,0:21:46.59:202,47,0	0/0:19,0:19:54.08:0,54,727	0/0:19,0:21:56.66:0,57,754	0/0:3,0:19:33.04:0,33,315	1/1:7,0:26:49.34:214,49,0	1/1:8,18:26:56.89:535,57,0	1/1:8,22:30:59.98:582,60,0	1/1:3,17:23:53.27:472,53,0	0/0:24,0:26:65.67:0,66,849	0/0:17,0:18:42.14:0,42,591	0/0:29,0:31:86.73:0,87,1194	0/0:14,0:14:39.12:0,39,527	0/1:13,16:30:62.75:352,0,63	1/1:4,17:21:41.98:406,42,0	1/1:2,12:14:27.03:262,27,0
chr10	85794987	.	GCCT	G	2225.88	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.411;DP=601;FS=8.580;HRun=0;HaplotypeScore=83.1873;InbreedingCoeff=0.9997;MQ=76.94;MQ0=0;MQRankSum=-2.345;QD=34.24;ReadPosRankSum=2.878;VQSLOD=3.5486;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.27:0,84,1747	0/0:15,0:15:39.12:0,39,792	0/0:15,0:15:33.11:0,33,653	0/0:19,0:19:51.17:0,51,1012	0/0:16,0:16:42.12:0,42,857	0/0:17,0:17:51.15:0,51,1014	0/0:27,0:27:72.22:0,72,1445	0/0:26,0:26:66.20:0,66,1268	0/0:28,0:28:69.24:0,69,1481	0/0:28,0:28:84.27:0,84,1751	0/0:13,0:13:39.11:0,39,807	1/1:3,20:23:51.17:809,51,0	1/1:0,23:23:57.19:904,57,0	1/1:3,16:19:42.14:657,42,0	0/0:18,0:18:54.16:0,54,1099	0/0:24,0:24:72.24:0,72,1536	0/0:37,0:37:99:0,105,2235	0/0:15,0:15:45.10:0,45,897	0/0:19,0:19:57.11:0,57,1007	0/0:16,0:16:45.15:0,45,966	0/0:40,0:40:99:0,114,2450	0/0:26,0:26:78.25:0,78,1655	0/0:12,0:12:36.12:0,36,768	0/0:29,0:28:81.22:0,81,1661	0/0:16,0:16:45.15:0,45,969	0/0:18,0:18:54.17:0,54,1113	0/0:17,0:17:48.14:0,48,969	0/0:15,0:15:39.13:0,39,853
chr10	85795122	.	A	ATC	3592.84	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-12.752;DP=650;FS=0.979;HRun=0;HaplotypeScore=72.3126;InbreedingCoeff=0.9868;MQ=91.86;MQ0=1;MQRankSum=-1.574;QD=44.91;ReadPosRankSum=2.213;VQSLOD=5.3408;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,117,1603	1/1:0,5:5:15.05:266,15,0	0/0:29,0:29:66.22:0,66,897	0/0:28,0:28:63.20:0,63,848	0/0:27,0:27:72.24:0,72,989	0/0:21,0:21:57.19:0,57,783	0/0:18,0:18:51.17:0,51,700	0/0:30,0:30:84.28:0,84,1152	0/0:23,0:23:60.20:0,60,822	1/1:1,15:16:45.14:772,45,0	1/1:2,17:21:42.14:745,42,0	0/0:19,0:19:54.18:0,54,741	0/0:27,0:27:72.20:0,72,968	0/0:18,0:18:48.14:0,48,638	0/0:19,0:19:54.18:0,54,739	0/0:16,0:15:39.11:0,39,519	1/1:1,37:37:99:1810,102,0	0/0:24,0:24:72.20:0,72,952	0/0:17,0:17:48.16:0,48,660	0/0:16,0:16:42.14:0,42,577	0/0:46,0:46:99:0,126,1715	0/0:20,0:20:54.18:0,54,742	0/0:16,0:16:45.15:0,45,617	0/0:31,0:31:84.28:0,84,1154	0/0:28,0:28:81.23:0,81,1092	0/0:27,1:28:28:0,28,1016	0/0:21,0:21:60.20:0,60,824	0/0:4,0:4:12.04:0,12,165
chr10	85795314	.	A	ATT	3679.65	PASS	AB=0.926;AC=9;AF=0.161;AN=56;BaseQRankSum=-8.428;DP=608;FS=4.750;HRun=8;HaplotypeScore=68.1260;InbreedingCoeff=0.8655;MQ=74.37;MQ0=0;MQRankSum=-1.033;QD=30.41;ReadPosRankSum=-0.217;VQSLOD=3.6499;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:99:0,105,1170	1/1:1,7:8:24.08:364,24,0	0/0:20,0:19:35.91:0,36,383	0/0:15,0:15:36.08:0,36,390	0/0:28,0:28:72.19:0,72,802	0/0:34,0:34:99:0,99,1094	0/0:21,0:21:45.07:0,45,491	0/0:24,0:24:60.15:0,60,668	0/0:18,0:18:51.13:0,51,569	1/1:5,25:30:71.69:1072,72,0	1/1:2,19:23:60.03:825,60,0	0/0:17,0:17:42.10:0,42,468	0/0:20,0:20:54.12:0,54,602	0/0:11,0:11:30.07:0,30,334	0/0:23,0:23:66.15:0,66,726	0/0:20,0:20:60.12:0,60,648	1/1:1,33:34:87.30:1381,87,0	0/0:23,0:23:57.14:0,57,635	0/0:19,0:20:35.99:0,36,448	0/0:21,0:21:57.11:0,57,623	0/0:15,0:15:33.08:0,33,367	0/0:19,0:19:51.13:0,51,569	0/0:19,0:19:54.12:0,54,591	0/0:22,0:22:57.14:0,57,635	0/0:18,0:18:25.38:0,25,477	0/1:23,2:25:38.12:38,0,511	0/0:33,0:32:96.21:0,96,1056	0/0:9,0:9:21.05:0,21,234
chr10	85795559	.	TGAAATAG	T	4952.36	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.383;DP=713;FS=0.000;HRun=0;HaplotypeScore=162.1386;InbreedingCoeff=0.9663;MQ=82.63;MQ0=0;MQRankSum=-8.744;QD=57.59;ReadPosRankSum=-0.657;VQSLOD=4.7108;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,4183	1/1:0,9:9:18.03:484,18,0	0/0:23,0:23:69.19:0,69,2319	0/0:23,0:23:63.13:0,63,1826	0/0:26,0:26:78.27:0,78,3073	0/0:30,0:30:87.28:0,87,3235	0/0:20,0:20:57.20:0,57,2054	0/0:25,0:25:69.24:0,69,2292	0/0:29,0:29:87.30:0,87,3445	1/1:1,32:33:90.29:2136,90,0	1/1:0,25:25:66.22:1650,66,0	0/0:31,0:31:90.31:0,90,3354	0/0:18,0:18:54.17:0,54,1977	0/0:20,0:20:57.18:0,57,2182	0/0:30,0:30:90.29:0,90,3174	0/0:21,0:21:63.22:0,63,2468	1/1:0,19:19:27.09:681,27,0	0/0:20,0:20:57.20:0,57,2191	0/0:20,0:20:54.09:0,54,1855	0/0:25,0:25:75.23:0,75,2876	0/0:34,0:34:99:0,102,3773	0/0:18,0:18:54.19:0,54,2070	0/0:21,0:21:60.21:0,60,2335	0/0:42,0:42:99:0,123,4500	0/0:25,0:25:75.25:0,75,2832	0/0:35,2:37:5.54:0,6,3515	0/0:34,0:34:99:0,102,4067	0/0:19,0:19:57.20:0,57,2276
chr10	85795839	.	GCAA	G	5800.79	PASS	AB=0.577;AC=13;AF=0.232;AN=56;BaseQRankSum=10.534;DP=671;FS=3.192;HRun=0;HaplotypeScore=99.9041;InbreedingCoeff=0.8988;MQ=86.63;MQ0=0;MQRankSum=-5.556;QD=38.42;ReadPosRankSum=2.313;VQSLOD=5.8195;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,138,2799	0/0:7,0:7:21.07:0,21,419	0/0:24,0:24:63.22:0,63,1274	0/0:25,0:25:66.23:0,66,1347	0/0:24,0:24:63.18:0,63,1247	0/0:22,0:22:60.20:0,60,1288	0/0:29,0:29:81.21:0,81,1720	1/1:3,17:20:51.17:817,51,0	0/0:27,0:27:78.27:0,78,1687	0/0:31,0:31:81.28:0,81,1760	0/0:18,0:18:51.17:0,51,1092	0/0:25,0:25:66.17:0,66,1316	0/0:20,0:20:57.20:0,57,1257	0/0:15,0:15:45.15:0,45,940	0/0:26,0:26:69.24:0,69,1488	0/0:26,0:26:78.25:0,78,1680	0/0:29,0:29:87.30:0,87,1920	0/0:29,0:29:78.27:0,78,1701	1/1:7,18:25:57.19:905,57,0	1/1:2,11:13:33.11:508,33,0	1/1:3,43:46:99:1807,114,0	0/0:14,0:14:39.13:0,39,843	0/0:15,0:15:36.12:0,36,746	0/0:37,0:37:99:0,108,2365	0/0:24,0:24:69.24:0,69,1426	0/1:4,11:15:33.14:415,0,33	1/1:2,19:21:57.19:915,57,0	1/1:0,10:11:27.09:433,27,0
chr10	85796465	.	CTTTTTTCTT	C	1641.08	PASS	AB=0.950;AC=18;AF=0.321;AN=56;BaseQRankSum=-1.185;DP=399;FS=23.132;HRun=0;HaplotypeScore=112.7110;InbreedingCoeff=0.4657;MQ=63.57;MQ0=8;MQRankSum=-2.982;QD=15.06;ReadPosRankSum=1.243;VQSLOD=1.0398;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:24.11:0,24,589	0/0:10,0:10:15:0,15,395	0/0:21,0:8:7.28:0,7,43	0/0:16,0:10:7.33:0,7,87	0/0:25,0:24:63.18:0,63,2019	0/0:17,0:17:45.12:0,45,1534	0/1:16,0:16:7.65:8,0,318	1/1:13,3:15:27.05:414,27,0	0/0:20,0:20:54.12:0,54,1450	0/0:11,0:11:21.93:0,22,623	0/0:15,0:15:39.13:0,39,1172	0/1:6,0:6:14.73:15,0,202	0/1:6,0:5:11.58:12,0,269	0/1:9,0:8:13.79:14,0,309	0/0:15,0:15:42.09:0,42,1157	0/0:7,0:7:21.06:0,21,602	0/0:40,0:40:69.57:0,70,1746	0/1:14,0:10:2.43:2,0,438	1/1:1,2:3:6.02:172,6,0	1/1:7,2:9:27.02:484,27,0	1/1:3,7:9:6.91:170,7,0	0/0:20,0:19:54.18:0,54,1724	0/0:16,0:16:39.09:0,39,1418	0/0:22,0:22:48.46:0,48,1426	0/0:9,0:9:27.08:0,27,949	0/1:4,3:6:57.95:268,0,58	1/1:5,1:5:12.46:153,12,0	1/1:2,4:6:6:110,6,0
chr10	85796469	.	TTTC	T	1462.85	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=0.897;DP=407;FS=3.768;HRun=0;HaplotypeScore=75.6026;InbreedingCoeff=0.4711;MQ=62.20;MQ0=10;MQRankSum=-3.975;QD=8.22;ReadPosRankSum=-3.094;VQSLOD=1.4905;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,5:28:57:509,57,0	0/0:9,0:9:8.93:0,9,61	0/1:21,0:8:15.83:16,0,19	0/0:13,0:7:6.63:0,7,71	0/0:28,0:27:61.42:0,61,747	0/0:18,0:18:43.71:0,44,611	1/1:17,0:17:28.31:215,28,0	1/1:16,0:14:13.04:176,13,0	0/0:20,0:20:37.38:0,37,480	0/0:13,0:13:10.56:0,11,163	0/1:19,0:19:0.84:1,0,242	0/1:7,0:6:18.19:18,0,33	0/1:7,0:6:18.93:19,0,29	0/1:9,0:8:13.96:14,0,58	0/0:14,0:14:39.65:0,40,437	0/0:8,0:8:17.26:0,17,201	0/0:36,0:36:14.42:0,14,446	0/1:13,0:9:18.80:19,0,38	1/1:2,0:2:6.02:75,6,0	1/1:9,0:9:22.67:226,23,0	1/1:10,0:9:9.01:93,9,0	0/0:21,0:20:54.41:0,54,588	0/0:15,0:15:36.44:0,36,589	0/0:24,0:24:34.55:0,35,537	0/0:10,0:10:25.56:0,26,356	1/1:7,0:6:9.87:134,10,0	0/1:6,0:5:1.84:91,0,2	1/1:6,0:5:5.81:50,6,0
chr10	85796470	.	TTC	T	1520.41	PASS	AB=0.992;AC=26;AF=0.464;AN=56;BaseQRankSum=1.903;DP=400;FS=2.808;HRun=0;HaplotypeScore=68.2502;InbreedingCoeff=0.4215;MQ=60.83;MQ0=10;MQRankSum=-6.203;QD=7.80;ReadPosRankSum=-5.368;VQSLOD=1.5887;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:26,3:28:59.25:518,59,0	0/1:8,0:8:17.30:17,0,18	0/1:17,0:6:5.11:5,0,20	0/0:13,0:7:6.63:0,7,66	0/0:27,0:26:47.07:0,47,540	0/0:18,0:18:18.61:0,19,440	1/1:15,1:16:33.23:265,33,0	1/1:14,0:12:20.65:184,21,0	0/0:20,0:20:28.32:0,28,367	0/1:13,1:14:11.03:11,0,88	0/1:19,0:19:24.15:24,0,154	0/1:7,0:6:8.59:19,0,9	0/1:7,0:6:4.58:29,0,5	0/1:9,0:8:15.01:15,0,20	0/0:14,0:14:28.17:0,28,346	0/0:8,0:8:16.21:0,16,151	0/0:36,0:36:23.76:0,24,322	0/1:13,0:9:4.14:37,0,4	1/1:2,0:2:6.01:62,6,0	1/1:9,0:9:24.97:201,25,0	1/1:10,0:9:8.99:80,9,0	0/0:21,0:20:41.74:0,42,441	0/0:14,0:14:36.62:0,37,463	0/0:24,0:24:21.85:0,22,398	0/0:10,0:10:10.56:0,11,269	1/1:7,0:6:11.78:116,12,0	1/1:6,0:5:6.25:92,6,0	1/1:6,0:5:5.50:40,6,0
chr10	85798000	.	AAAATAAAT	A	5387.03	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.704;DP=386;FS=3.816;HRun=0;HaplotypeScore=95.3221;InbreedingCoeff=0.8325;MQ=55.11;MQ0=4;MQRankSum=-10.143;QD=37.67;ReadPosRankSum=-1.551;VQSLOD=4.2928;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:67.47:0,67,2671	0/0:9,0:9:21.07:0,21,899	0/0:11,0:5:2.50:0,2,9	0/0:8,0:3:2.97:0,3,20	0/0:15,0:15:33.10:0,33,1296	0/0:23,0:23:63.21:0,63,2577	0/0:5,0:5:15.05:0,15,639	1/1:5,17:20:45.12:940,45,0	0/0:7,0:7:21.07:0,21,815	0/0:14,0:14:33.11:0,33,1371	0/0:13,0:13:30.10:0,30,1269	0/0:4,0:4:6.02:0,6,257	0/0:8,0:8:18.06:0,18,691	0/0:6,0:6:6.02:0,6,255	0/0:7,0:7:18.06:0,18,770	0/0:12,0:12:21.06:0,21,721	0/0:20,0:20:54.17:0,54,2140	0/0:22,0:22:48.11:0,48,1762	1/1:7,12:19:36.09:754,36,0	1/1:8,16:24:32.98:701,33,0	1/1:3,5:8:3.01:81,3,0	0/0:6,0:6:9.03:0,9,367	0/0:4,0:4:6.02:0,6,255	0/0:8,0:8:12.04:0,12,453	0/0:15,0:15:39.13:0,39,1594	1/1:5,23:28:66.21:1603,66,0	1/1:5,14:19:26.94:724,27,0	1/1:1,22:23:24.05:584,24,0
chr10	85798790	.	GT	G	1134.23	PASS	AB=0.938;AC=14;AF=0.250;AN=56;BaseQRankSum=0.047;DP=389;FS=16.542;HRun=3;HaplotypeScore=48.6347;InbreedingCoeff=0.7921;MQ=76.08;MQ0=0;MQRankSum=0.270;QD=12.74;ReadPosRankSum=-1.209;VQSLOD=0.7694;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:62.87:0,63,558	0/0:4,0:4:9.03:0,9,116	0/0:23,0:20:39.81:0,40,414	0/0:13,0:12:24.93:0,25,282	0/0:15,0:15:27.87:0,28,254	0/0:12,0:12:24.51:0,25,260	0/0:27,0:27:70.37:0,70,631	1/1:8,0:8:17.84:129,18,0	0/0:10,0:10:28.57:0,29,294	0/0:8,0:8:5.93:0,6,101	0/0:5,0:5:7.26:0,7,64	0/0:13,0:13:32.88:0,33,319	0/0:10,0:10:23.97:0,24,214	0/0:14,0:14:38.99:0,39,420	0/0:14,0:14:37.86:0,38,378	0/0:14,0:14:32.60:0,33,406	0/0:27,0:27:70.43:0,70,753	1/1:3,19:22:44.97:510,45,0	1/1:11,2:13:23.93:202,24,0	1/1:3,0:3:8.98:71,9,0	1/1:15,1:16:8.73:177,9,0	0/0:12,0:12:21.92:0,22,227	0/0:8,0:8:21:0,21,212	0/0:28,0:28:69.76:0,70,758	0/0:18,0:18:29.48:0,29,270	0/1:12,1:14:1.41:147,0,1	1/1:5,0:5:2.10:40,2,0	0/1:8,0:8:0.75:34,0,1
chr10	85799078	.	ACACGCCTGAATCCTCCTGCCTC	A	2636.86	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.506;DP=423;FS=3.536;HRun=0;HaplotypeScore=230.7203;InbreedingCoeff=0.8789;MQ=81.63;MQ0=0;MQRankSum=-6.597;QD=79.90;ReadPosRankSum=2.012;VQSLOD=3.4655;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:93.30:0,93,6566	0/0:4,0:4:9.03:0,9,711	0/0:10,0:10:19.85:0,20,1113	0/0:19,0:19:32.47:0,32,1447	0/0:20,0:20:42.14:0,42,3929	0/0:19,0:19:45.15:0,45,3801	0/0:19,0:19:45.15:0,45,2783	0/0:24,0:24:30.10:0,30,1592	0/0:12,0:12:27.09:0,27,2767	0/0:7,0:7:18.06:0,18,1335	0/0:9,0:9:21.07:0,21,1876	1/1:4,9:13:18.06:1054,18,0	1/1:1,5:6:6.02:351,6,0	1/1:7,7:14:30.10:1364,30,0	0/0:8,0:8:21.07:0,21,1892	0/0:7,0:7:21.07:0,21,1843	0/0:31,0:31:72.25:0,72,5622	0/0:20,0:20:48.16:0,48,3414	0/0:23,0:23:45.11:0,45,3233	0/0:4,0:4:9.03:0,9,740	0/0:19,0:19:33.10:0,33,2244	0/0:11,0:11:30.10:0,30,2762	0/0:5,0:5:12.04:0,12,1229	0/0:12,0:12:33.11:0,33,2936	0/0:14,0:14:33.11:0,33,2758	0/0:10,0:10:21.07:0,21,1792	0/0:29,0:29:60.21:0,60,5866	0/0:7,0:7:9.03:0,9,817
chr10	85799096	.	GC	G	102.64	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.791;DP=422;FS=2.201;HRun=2;HaplotypeScore=57.7322;InbreedingCoeff=0.9083;MQ=81.47;MQ0=1;MQRankSum=-6.307;QD=4.11;ReadPosRankSum=1.899;VQSLOD=0.7670;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:99:0,135,1963	0/0:3,0:3:9.03:0,9,135	0/0:15,0:15:44.32:0,44,572	0/0:17,0:17:48.08:0,48,657	0/0:19,0:19:54.18:0,54,809	0/0:18,0:18:54.17:0,54,790	0/0:23,0:23:69.22:0,69,1014	0/0:23,0:23:69.23:0,69,1034	0/0:12,0:12:33.11:0,33,495	0/0:12,0:12:33.10:0,33,468	0/0:12,0:12:30.10:0,30,448	1/1:9,0:9:14.23:49,14,0	1/1:5,0:5:4.74:16,5,0	1/1:7,4:11:25.63:166,26,0	0/0:11,0:11:33.10:0,33,474	0/0:8,0:8:24.08:0,24,360	0/0:25,0:25:75.25:0,75,1117	0/0:18,0:18:54.18:0,54,790	0/0:17,0:17:51.13:0,51,699	0/0:6,0:6:18.04:0,18,231	0/0:13,0:13:36.11:0,36,518	0/0:15,0:15:42.14:0,42,630	0/0:9,0:9:24.02:0,24,315	0/0:12,0:12:36.12:0,36,539	0/0:15,0:15:45.15:0,45,674	0/0:14,0:14:39.13:0,39,571	0/0:23,0:23:63.21:0,63,944	0/0:7,0:7:12.04:0,12,180
chr10	85799151	.	G	GATAT	3911.94	PASS	AB=0.583;AC=13;AF=0.232;AN=56;BaseQRankSum=-9.139;DP=357;FS=3.392;HRun=0;HaplotypeScore=78.5091;InbreedingCoeff=0.7681;MQ=82.11;MQ0=3;MQRankSum=-0.452;QD=43.95;ReadPosRankSum=-2.388;VQSLOD=3.5340;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:99:0,99,1526	0/0:4,0:4:9.03:0,9,157	0/0:11,0:11:5.93:0,6,44	0/0:15,0:12:9.65:0,10,84	0/0:15,0:15:39.10:0,39,602	0/0:19,0:19:42.14:0,42,715	0/0:14,0:14:27.08:0,27,421	1/1:4,14:20:52.90:1024,53,0	0/0:9,0:9:18.03:0,18,258	0/0:12,0:12:30.10:0,30,520	0/0:7,0:7:18.04:0,18,280	0/0:8,0:8:13.59:0,14,171	0/0:9,0:9:27.02:0,27,393	0/0:17,0:17:33.11:0,33,486	0/0:8,0:8:21.05:0,21,333	0/0:2,0:2:6:0,6,76	0/0:15,0:15:30.10:0,30,502	0/0:20,0:20:42.61:0,43,715	1/1:5,11:16:42.14:929,42,0	1/1:1,3:4:6.02:152,6,0	1/1:2,6:9:15.05:381,15,0	0/0:7,0:7:9.02:0,9,117	0/0:7,0:7:18.06:0,18,307	0/0:8,0:8:3.01:0,3,52	0/0:18,0:18:39.13:0,39,671	0/1:4,10:14:22.08:603,0,22	1/1:6,8:15:20.86:449,21,0	1/1:4,5:11:15.05:373,15,0
chr10	85799163	.	CAT	C	1536.51	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=4.508;DP=336;FS=5.167;HRun=0;HaplotypeScore=64.8329;InbreedingCoeff=0.7351;MQ=76.52;MQ0=3;MQRankSum=-1.268;QD=14.63;ReadPosRankSum=0.847;VQSLOD=3.0971;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,38:42:87.28:1107,87,0	0/0:5,0:5:15.05:0,15,244	0/0:6,0:6:2.94:0,3,18	0/1:16,0:13:21.89:22,0,35	0/0:16,0:16:39.13:0,39,633	0/0:17,0:17:42.14:0,42,694	1/1:3,9:12:18.06:229,18,0	0/0:25,0:25:66.20:0,66,1014	0/0:7,0:7:18.06:0,18,293	0/0:14,0:14:39.13:0,39,649	0/0:10,0:10:24.01:0,24,365	1/1:3,0:8:16.56:75,17,0	1/1:0,0:10:25.47:124,25,0	1/1:4,0:16:31.25:153,31,0	0/0:7,0:7:18.06:0,18,298	0/0:3,0:3:6.02:0,6,97	0/0:13,0:13:33.11:0,33,543	0/0:18,0:18:42.09:0,42,458	0/0:20,0:20:51.13:0,51,785	0/0:4,0:4:9.03:0,9,140	0/0:8,0:8:15.05:0,15,243	0/0:3,0:3:3.01:0,3,46	0/0:7,0:7:18.06:0,18,298	0/0:1,0:1:3.01:0,3,50	0/0:13,0:13:36.12:0,36,602	0/0:11,0:11:27.09:0,27,443	0/0:12,0:12:24.08:0,24,386	0/0:10,0:10:9.03:0,9,145
chr10	85799964	.	TA	T	2071.07	PASS	AB=0.822;AC=19;AF=0.339;AN=56;BaseQRankSum=3.798;DP=441;FS=0.000;HRun=13;HaplotypeScore=47.8962;InbreedingCoeff=0.7531;MQ=52.27;MQ0=20;MQRankSum=-0.723;QD=11.26;ReadPosRankSum=1.814;VQSLOD=3.0235;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,30:31:68.58:503,69,0	0/0:9,0:9:18.02:0,18,171	0/1:6,2:3:9.89:35,0,10	0/1:12,0:5:11.19:11,0,44	0/0:20,0:20:51.37:0,51,470	0/0:15,0:15:32.89:0,33,305	1/1:1,8:9:20.88:153,21,0	1/1:7,20:24:50.40:355,50,0	0/0:10,0:10:23.70:0,24,208	0/0:19,0:19:36.03:0,36,338	0/0:17,0:17:40.56:0,41,335	0/0:12,0:13:22.58:0,23,266	0/0:11,0:11:32.07:0,32,293	0/0:14,3:15:11.09:0,11,254	0/0:14,0:14:8.86:0,9,185	0/0:18,0:18:35.83:0,36,322	0/0:25,0:26:54.60:0,55,571	0/0:2,0:14:14.20:0,14,72	0/1:7,7:7:8.29:110,0,8	1/1:4,7:9:17.89:131,18,0	1/1:2,12:14:26.85:197,27,0	0/0:8,0:8:15:0,15,138	0/0:16,0:15:39.05:0,39,373	0/0:8,0:7:21.03:0,21,204	0/0:19,0:18:45.02:0,45,428	1/1:5,20:24:30.39:380,30,0	1/1:4,13:17:14.32:204,14,0	1/1:1,11:12:11.59:197,12,0
chr10	85800645	.	TCTCC	T	139.28	PASS	AB=0.968;AC=15;AF=0.278;AN=54;BaseQRankSum=2.405;DP=438;FS=53.050;HRun=0;HaplotypeScore=68.2810;InbreedingCoeff=-0.0240;MQ=35.24;MQ0=73;MQRankSum=1.344;QD=0.67;ReadPosRankSum=-1.473;VQSLOD=-0.5518;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:12:10.62:0,11,154	0/0:5,0:5:8.89:0,9,64	1/1:15,0:2:4.07:12,4,0	./.	0/1:12,0:11:2.60:3,0,102	0/1:19,1:18:28.29:28,0,84	0/0:19,0:15:1.70:0,2,136	0/0:28,0:8:17.90:0,18,138	0/1:15,0:9:17.56:18,0,58	0/0:22,0:16:19.52:0,20,169	0/0:7,0:5:5.81:0,6,42	0/0:16,0:11:0.30:0,0,59	0/1:15,0:12:4.15:4,0,59	0/0:7,0:6:8.32:0,8,38	0/0:21,0:19:30.38:0,30,325	0/0:13,0:13:26.84:0,27,269	0/1:22,0:22:37.17:37,0,100	0/0:9,0:7:5.88:0,6,37	0/1:18,0:13:9.54:10,0,149	1/1:9,0:6:3.47:27,3,0	1/1:25,0:19:5.14:72,5,0	0/0:9,0:8:5.46:0,5,47	0/0:14,0:11:16.74:0,17,127	0/1:19,0:16:37.59:38,0,59	0/0:7,0:6:2.98:0,3,21	0/1:18,5:21:24.22:24,0,210	0/1:14,0:11:10.29:10,0,49	0/0:6,0:3:5.96:0,6,43
chr10	85800684	.	CTCT	C	69.22	PASS	AB=0.808;AC=3;AF=0.056;AN=54;BaseQRankSum=5.187;DP=481;FS=7.203;HRun=0;HaplotypeScore=89.9463;InbreedingCoeff=-0.0808;MQ=47.64;MQ0=54;MQRankSum=-3.942;QD=1.33;ReadPosRankSum=1.180;VQSLOD=0.5087;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:17:44.89:0,45,918	0/0:6,0:5:9.03:0,9,196	0/0:32,0:11:12.98:0,13,266	0/0:70,0:16:2.38:0,2,379	0/0:13,0:10:30.10:0,30,540	0/0:25,0:22:53.92:0,54,1081	0/0:20,0:20:26.45:0,26,530	0/0:25,0:12:26.30:0,26,206	0/0:12,0:9:15.05:0,15,365	0/0:13,0:8:21.07:0,21,496	0/0:14,0:10:30.10:0,30,614	0/0:12,0:9:24.55:0,25,444	0/0:12,0:11:24.08:0,24,578	0/0:12,0:11:26.83:0,27,516	0/0:12,0:11:20.80:0,21,443	0/0:5,0:5:12.04:0,12,246	0/0:22,0:20:39.13:0,39,757	0/0:11,0:11:27.01:0,27,331	0/1:14,4:14:81.11:81,0,139	0/1:17,4:18:17.20:17,0,81	0/0:13,1:11:6:0,6,50	0/0:15,0:11:30.10:0,30,660	0/0:18,0:15:42.14:0,42,902	0/0:24,0:24:42.54:0,43,919	0/0:11,0:10:23.82:0,24,466	0/1:9,4:11:68.97:69,0,89	0/0:4,0:2:6.02:0,6,72	./.
chr10	85800693	.	TCC	T	845.39	PASS	AB=0.814;AC=8;AF=0.148;AN=54;BaseQRankSum=6.745;DP=463;FS=13.361;HRun=3;HaplotypeScore=96.3092;InbreedingCoeff=0.3071;MQ=55.13;MQ0=31;MQRankSum=-8.877;QD=9.50;ReadPosRankSum=-1.160;VQSLOD=-0.6804;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:51.12:0,51,889	0/0:5,0:4:9.03:0,9,164	0/0:41,0:16:30.41:0,30,373	0/0:71,0:22:8.20:0,8,277	0/0:12,0:11:33.10:0,33,593	0/0:21,0:21:63.14:0,63,1075	0/0:17,0:17:32.85:0,33,478	0/1:22,2:16:42.18:214,0,42	0/0:13,0:11:2.10:0,2,334	0/0:15,0:13:36.11:0,36,654	0/0:13,0:11:33.11:0,33,608	0/0:11,0:11:30.66:0,31,500	0/0:10,0:10:24.08:0,24,447	0/0:12,0:11:30.07:0,30,471	0/0:13,0:13:27.08:0,27,460	0/0:4,0:4:12.04:0,12,228	0/0:18,0:17:43.28:0,43,624	0/1:7,2:9:9.90:51,0,10	0/1:10,7:16:8.41:314,0,8	0/1:16,5:20:12.69:147,0,13	0/0:8,1:9:5.90:0,6,37	0/0:12,0:11:33.06:0,33,560	0/0:18,0:17:48.16:0,48,874	0/0:24,0:24:50.76:0,51,847	0/0:10,0:9:24.08:0,24,435	1/1:9,5:13:6.40:233,6,0	1/1:4,0:3:4.82:17,5,0	./.
chr10	85800695	.	C	CCT	1623.51	PASS	AB=0.875;AC=14;AF=0.259;AN=54;BaseQRankSum=5.375;DP=473;FS=16.649;HRun=0;HaplotypeScore=101.0424;InbreedingCoeff=0.8267;MQ=56.08;MQ0=29;MQRankSum=-8.766;QD=14.37;ReadPosRankSum=-2.079;VQSLOD=1.8669;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:48.11:0,48,587	0/0:4,0:4:6.02:0,6,76	0/0:44,0:16:25.93:0,26,224	0/0:77,0:25:3.65:0,4,218	0/0:12,0:11:30.10:0,30,378	0/0:21,0:21:57.11:0,57,685	0/0:16,0:17:30.04:0,30,337	1/1:16,7:16:36.04:521,36,0	0/1:13,0:11:0.96:1,0,196	0/0:15,0:13:36.11:0,36,442	0/0:13,0:11:30.10:0,30,378	0/0:11,0:11:27.09:0,27,340	0/0:10,0:10:23.98:0,24,301	0/0:12,0:11:30.08:0,30,356	0/0:13,0:13:21.07:0,21,265	0/0:4,0:4:12.04:0,12,151	0/0:18,0:17:39.03:0,39,436	1/1:5,4:9:10.95:180,11,0	1/1:11,6:16:33.06:453,33,0	1/1:11,11:21:15.04:244,15,0	0/1:6,3:9:0:0,0,0	0/0:12,0:11:27.07:0,27,328	0/0:19,0:18:45.13:0,45,553	0/0:24,0:24:50.10:0,50,586	0/0:11,0:10:27.07:0,27,325	1/1:12,4:15:24.51:298,25,0	1/1:1,3:3:6.02:99,6,0	./.
chr10	85800726	.	CTGT	C	844.94	PASS	AB=0.981;AC=13;AF=0.241;AN=54;BaseQRankSum=3.582;DP=584;FS=0.000;HRun=0;HaplotypeScore=146.9056;InbreedingCoeff=-0.1584;MQ=61.12;MQ0=22;MQRankSum=-6.776;QD=4.97;ReadPosRankSum=-9.405;VQSLOD=-0.0331;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,1:21:16.13:0,16,419	0/1:7,0:7:14.05:14,0,84	0/0:64,0:23:42.60:0,43,940	0/0:115,0:41:45.64:0,46,1082	0/0:15,0:15:42.14:0,42,945	0/0:20,0:20:57.11:0,57,1270	0/1:14,0:13:5.66:6,0,252	0/1:24,0:23:99:178,0,140	0/0:8,0:8:21.07:0,21,466	0/1:21,0:21:90.82:91,0,375	0/0:17,0:17:34.89:0,35,368	0/1:13,1:14:18.58:19,0,284	0/1:13,1:14:98.25:98,0,135	0/0:12,0:12:0.27:0,0,250	0/0:15,0:15:33.11:0,33,746	0/0:7,0:7:21.07:0,21,486	0/0:20,0:20:2.35:0,2,338	0/1:9,0:9:27.86:28,0,136	0/1:17,0:15:99:134,0,143	0/1:22,2:23:56.81:169,0,57	./.	0/0:18,0:18:51.18:0,51,1182	0/0:31,0:31:78.24:0,78,1657	0/0:30,0:29:66.70:0,67,1515	0/0:16,0:16:45.15:0,45,1045	0/1:14,0:14:48.39:48,0,195	0/1:8,0:6:75.76:87,0,76	1/1:4,0:4:9.03:124,9,0
chr10	85800729	.	T	TC	7195.29	PASS	AB=0.533;AC=31;AF=0.554;AN=56;BaseQRankSum=2.288;DP=578;FS=1.746;HRun=0;HaplotypeScore=115.2429;InbreedingCoeff=0.8879;MQ=61.16;MQ0=25;MQRankSum=-7.248;QD=29.25;ReadPosRankSum=0.067;VQSLOD=4.5723;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:22:48.16:748,48,0	1/1:0,7:7:12.04:191,12,0	0/0:59,0:23:39.29:0,39,611	0/0:109,1:38:67.70:0,68,734	0/0:15,0:15:42.12:0,42,554	0/0:20,0:20:54.18:0,54,749	1/1:3,12:13:30.22:476,30,0	1/1:3,3:21:50.94:518,51,0	0/0:8,0:8:21.07:0,21,286	1/1:0,21:21:60.20:932,60,0	1/1:1,17:18:35.57:575,36,0	1/1:2,12:14:33.11:523,33,0	1/1:3,12:14:33.11:512,33,0	1/1:1,10:11:27.09:431,27,0	0/0:15,0:15:33.11:0,33,457	0/0:7,0:7:21.07:0,21,295	1/1:0,20:20:45.15:717,45,0	0/1:1,0:8:17.89:165,0,18	1/1:4,2:17:44.81:450,45,0	1/1:4,5:23:28.97:263,29,0	0/0:2,1:3:0:0,0,0	0/0:18,0:18:51.17:0,51,711	0/0:30,0:30:75.24:0,75,1018	0/0:29,0:28:66.22:0,66,918	0/0:16,0:15:45.15:0,45,627	1/1:3,2:17:44.97:460,45,0	1/1:1,2:7:14.97:134,15,0	1/1:0,0:4:9.02:100,9,0
chr10	85800742	.	TTCTC	T	241.92	PASS	AB=1.000;AC=15;AF=0.341;AN=44;BaseQRankSum=-0.560;DP=553;FS=12.457;HRun=0;HaplotypeScore=142.2726;InbreedingCoeff=0.1629;MQ=55.98;MQ0=41;MQRankSum=1.329;QD=1.02;ReadPosRankSum=2.299;VQSLOD=2.2783;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:0.47:0,0,1	0/1:7,0:7:15.19:21,0,15	0/0:37,0:12:0:0,0,0	0/1:86,0:28:0:0,0,0	./.	0/0:19,0:18:3.41:0,3,19	./.	./.	0/1:10,0:9:4.76:5,0,6	0/1:19,0:19:8.09:8,0,32	0/0:15,0:15:2.83:0,3,18	0/1:14,0:13:25.43:25,0,52	0/1:13,0:12:1.36:1,0,12	0/0:12,0:10:5.79:0,6,59	1/1:16,0:14:5.05:28,5,0	1/1:9,0:9:7.30:60,7,0	0/0:24,0:23:9.87:0,10,96	0/1:13,0:13:31.97:38,0,32	0/0:19,0:14:5.97:0,6,79	0/0:21,0:19:0.47:0,0,2	./.	0/0:23,0:18:3.47:0,3,26	./.	1/1:30,1:30:5.38:151,5,0	1/1:18,0:15:3.89:28,4,0	0/0:19,0:19:13.07:0,13,123	0/0:12,0:10:10.25:0,10,92	./.
chr10	85800779	.	TCTCTCTCTCTCTCC	T	2241.60	PASS	AB=0.991;AC=22;AF=0.407;AN=54;BaseQRankSum=5.170;DP=494;FS=0.000;HRun=0;HaplotypeScore=182.6769;InbreedingCoeff=-0.0416;MQ=44.26;MQ0=52;MQRankSum=0.107;QD=7.23;ReadPosRankSum=-4.627;VQSLOD=1.3043;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:17:41.95:161,0,42	1/1:7,1:8:14.46:204,14,0	./.	0/1:21,0:5:2.17:2,0,26	0/0:13,0:12:24.02:0,24,455	0/0:19,0:17:35.81:0,36,505	0/1:18,0:13:45.74:154,0,46	0/1:18,0:6:2.42:79,0,2	0/0:17,0:13:11.26:0,11,506	1/1:24,0:21:46.41:482,46,0	1/1:11,0:11:16.93:152,17,0	0/1:18,0:16:99:101,0,115	0/1:21,0:18:91.57:92,0,293	0/1:14,0:11:30.35:30,0,223	0/0:21,0:19:30.38:0,30,409	0/0:18,0:17:35.63:0,36,623	0/1:25,4:26:79.55:335,0,80	0/1:16,0:15:99:177,0,222	0/1:16,0:11:59.46:59,0,225	0/1:20,0:16:67.69:68,0,227	1/1:11,0:7:8.97:71,9,0	0/0:15,0:12:17.55:0,18,392	0/0:25,0:22:12.12:0,12,142	0/0:36,0:33:69.09:0,69,1200	0/0:15,0:11:27.06:0,27,552	0/1:22,0:21:88.45:88,0,731	0/1:14,0:13:99:126,0,240	0/1:8,0:6:33.41:35,0,33
chr10	85800878	.	A	AG	12737.04	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-10.156;DP=480;FS=0.000;HRun=0;HaplotypeScore=46.9905;InbreedingCoeff=0.9966;MQ=70.81;MQ0=0;MQRankSum=-0.180;QD=43.03;ReadPosRankSum=0.813;VQSLOD=4.9987;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:78.27:1246,78,0	1/1:0,9:9:24.08:383,24,0	0/0:9,0:9:24.07:0,24,295	0/0:8,0:8:15.04:0,15,196	0/0:20,0:20:57.16:0,57,747	0/0:18,0:18:51.13:0,51,691	1/1:0,25:25:72.25:1150,72,0	1/1:0,20:20:54.17:840,54,0	0/0:12,0:12:36.12:0,36,502	1/1:2,16:18:54.18:862,54,0	1/1:0,11:11:30.10:478,30,0	1/1:0,16:16:42.14:671,42,0	1/1:0,15:15:42.14:670,42,0	1/1:1,16:18:48.16:754,48,0	0/0:17,0:17:51.17:0,51,713	0/0:17,0:17:51.17:0,51,713	1/1:0,31:31:93.21:1453,93,0	1/1:0,15:15:36.12:575,36,0	1/1:2,12:14:39.13:620,39,0	1/1:1,12:13:30.10:479,30,0	1/1:1,16:16:45.08:688,45,0	0/0:18,0:18:51.17:0,51,713	0/0:17,0:17:51.10:0,51,667	0/0:36,0:36:99:0,105,1443	0/0:12,0:12:36.12:0,36,503	1/1:0,16:16:48.16:765,48,0	1/1:1,20:20:45.15:718,45,0	1/1:0,8:8:24.08:383,24,0
chr10	85801738	.	C	CGG	1795.23	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=1.338;DP=505;FS=12.891;HRun=7;HaplotypeScore=74.3440;InbreedingCoeff=0.9580;MQ=84.79;MQ0=1;MQRankSum=-4.210;QD=14.60;ReadPosRankSum=-0.130;VQSLOD=0.0917;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:29:43.97:157,44,0	1/1:1,6:7:5.31:98,5,0	0/0:28,0:28:45.06:0,45,579	0/0:10,0:10:17.05:0,17,164	0/0:17,0:17:49.68:0,50,551	0/0:16,0:16:45.12:0,45,511	1/1:3,0:33:54.51:192,55,0	0/0:13,0:13:20.97:0,21,227	0/0:17,0:17:51.08:0,51,576	1/1:6,6:12:15.04:222,15,0	1/1:0,9:9:12.02:196,12,0	0/0:9,0:9:24:0,24,262	0/0:15,0:15:24.02:0,24,269	0/0:17,0:17:36.09:0,36,419	0/0:9,0:9:24.07:0,24,279	0/0:24,0:23:57.12:0,57,649	1/1:2,29:33:68.93:1110,69,0	0/0:26,0:26:72.19:0,72,826	0/0:13,0:14:38.85:0,39,429	0/0:8,0:8:21.05:0,21,233	0/0:52,0:52:99:0,129,1474	0/0:10,0:10:21.05:0,21,235	0/0:9,0:9:21.06:0,21,243	0/0:30,0:30:78.23:0,78,907	0/0:10,0:10:27.07:0,27,307	0/0:12,0:12:21.03:0,21,245	0/0:20,0:20:51.12:0,51,579	0/0:16,0:16:42.11:0,42,486
chr10	85802759	.	GA	G	2647.47	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.008;DP=413;FS=17.574;HRun=9;HaplotypeScore=40.5007;InbreedingCoeff=0.9671;MQ=66.95;MQ0=2;MQRankSum=0.352;QD=21.35;ReadPosRankSum=0.146;VQSLOD=2.1582;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.23:0,78,899	0/0:6,0:6:15.04:0,15,173	0/0:18,0:13:29.98:0,30,323	0/0:10,0:6:12.04:0,12,139	0/0:18,0:18:51.14:0,51,579	0/0:20,0:20:60.17:0,60,682	0/0:8,0:8:21.06:0,21,242	1/1:5,19:24:56.98:510,57,0	0/0:14,0:14:36.11:0,36,415	0/0:13,0:13:39.12:0,39,450	0/0:23,0:23:61.41:0,61,685	0/0:8,0:8:21.06:0,21,242	0/0:8,0:8:18.04:0,18,199	0/0:7,0:7:15.04:0,15,173	0/0:12,0:12:30.09:0,30,346	0/0:7,0:7:18.05:0,18,208	0/0:16,0:16:48.14:0,48,554	0/0:28,0:31:57.20:0,57,793	1/1:2,13:15:39.02:357,39,0	1/1:1,24:25:66.02:603,66,0	1/1:1,3:4:9:82,9,0	0/0:9,0:9:24.07:0,24,277	0/0:8,0:8:24.07:0,24,277	0/0:4,0:4:12.04:0,12,138	0/0:22,0:22:60.13:0,60,670	1/1:2,13:15:39.02:357,39,0	1/1:3,17:20:42.01:384,42,0	1/1:0,21:21:60.03:549,60,0
chr10	85804716	.	C	CT	5102.09	PASS	AB=0.975;AC=32;AF=0.571;AN=56;BaseQRankSum=8.261;DP=585;FS=7.923;HRun=8;HaplotypeScore=120.7565;InbreedingCoeff=0.6830;MQ=75.14;MQ0=1;MQRankSum=-2.948;QD=13.02;ReadPosRankSum=-2.083;VQSLOD=3.3096;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:40:80.65:482,81,0	1/1:9,1:10:8.97:70,9,0	0/1:28,1:26:11.49:11,0,246	0/0:22,1:18:9.71:0,10,156	0/0:24,0:24:62.99:0,63,565	0/0:21,0:21:56.97:0,57,506	1/1:22,0:22:49.24:294,49,0	1/1:8,17:25:65.90:641,66,0	0/0:19,0:19:48.01:0,48,435	0/1:23,0:23:5.10:96,0,5	1/1:15,0:15:2.86:46,3,0	1/1:20,0:20:40.29:252,40,0	1/1:18,0:18:33.91:240,34,0	1/1:8,0:8:14.54:85,15,0	0/0:13,0:13:32.69:0,33,285	0/0:2,0:11:14.26:0,14,42	0/1:25,1:27:18.26:33,0,18	0/1:28,0:28:22.66:45,0,23	1/1:11,14:25:62.97:622,63,0	1/1:3,13:16:36.54:396,37,0	1/1:9,16:25:51.28:503,51,0	0/0:17,0:17:39.90:0,40,355	0/0:17,0:18:20.64:0,21,302	0/0:31,0:31:74.89:0,75,660	0/0:15,0:15:35.99:0,36,321	1/1:14,15:30:63.03:653,63,0	1/1:9,14:23:45.90:520,46,0	1/1:4,2:6:12.93:114,13,0
chr10	85804724	.	TC	T	2912.75	PASS	AB=0.968;AC=28;AF=0.500;AN=56;BaseQRankSum=7.148;DP=555;FS=9.470;HRun=8;HaplotypeScore=125.0296;InbreedingCoeff=0.6722;MQ=71.26;MQ0=3;MQRankSum=-3.041;QD=9.19;ReadPosRankSum=-0.900;VQSLOD=0.9432;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:39:81.53:710,82,0	0/1:7,0:7:2.51:3,0,9	0/0:35,0:25:42.21:0,42,461	0/0:23,0:15:32.22:0,32,334	0/0:26,0:26:66.15:0,66,752	0/0:20,0:20:51.15:0,51,598	1/1:4,13:20:46.57:375,47,0	1/1:24,0:24:28.78:177,29,0	0/0:17,0:17:51.13:0,51,587	0/1:22,2:24:42.91:43,0,65	0/1:13,1:15:7.13:45,0,7	1/1:3,14:18:35.72:330,36,0	1/1:3,14:17:47.73:437,48,0	1/1:0,6:6:15.02:144,15,0	0/0:13,0:13:36.09:0,36,407	0/1:11,0:11:7.97:8,0,34	0/1:21,0:21:4.29:4,0,76	0/0:23,1:25:37.06:0,37,147	1/1:25,0:25:17.12:168,17,0	1/1:16,0:16:25.18:134,25,0	1/1:21,0:21:35.97:162,36,0	0/0:17,0:17:45.09:0,45,498	0/0:17,0:17:36.67:0,37,431	0/0:31,0:31:66.18:0,66,765	0/0:14,0:14:36.08:0,36,398	1/1:27,0:27:44.86:236,45,0	1/1:20,0:20:29.35:136,29,0	0/1:6,0:6:0.56:11,0,1
chr10	85804753	.	C	CT	4709.44	PASS	AB=0.944;AC=17;AF=0.304;AN=56;BaseQRankSum=-0.532;DP=501;FS=4.236;HRun=0;HaplotypeScore=86.3985;InbreedingCoeff=0.7749;MQ=56.34;MQ0=6;MQRankSum=-6.156;QD=27.22;ReadPosRankSum=-3.478;VQSLOD=4.0853;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,105,1395	0/0:6,0:6:15.04:0,15,193	0/1:26,0:13:4.79:5,0,309	0/1:22,1:11:5.78:6,0,170	0/0:17,0:17:48.04:0,48,607	0/0:16,0:16:48.16:0,48,669	0/0:23,0:23:62.90:0,63,815	1/1:5,10:15:45.14:661,45,0	0/0:15,0:15:42.11:0,42,552	0/0:26,0:25:72.24:0,72,998	0/0:16,0:16:42.12:0,42,548	0/0:11,0:11:27.06:0,27,356	0/0:12,0:12:36.01:0,36,475	0/0:10,0:10:27.09:0,27,376	0/1:9,1:10:17.50:17,0,347	0/0:10,0:10:30.10:0,30,417	0/0:31,0:31:87.26:0,87,1188	0/0:20,0:20:57.19:0,57,791	1/1:1,17:17:51.12:723,51,0	1/1:3,13:16:36.11:551,36,0	1/1:2,13:15:42.09:617,42,0	0/0:15,0:15:42.14:0,42,586	0/0:13,0:13:33.11:0,33,459	0/0:33,0:33:93.31:0,93,1293	0/0:13,0:13:36.12:0,36,502	1/1:1,27:28:84.28:1320,84,0	1/1:2,12:12:42.10:619,42,0	1/1:2,5:7:12.04:191,12,0
chr10	85805932	.	GAAA	G	1388.67	PASS	AB=0.783;AC=16;AF=0.286;AN=56;BaseQRankSum=3.725;DP=525;FS=3.044;HRun=17;HaplotypeScore=86.7252;InbreedingCoeff=0.4693;MQ=56.81;MQ0=11;MQRankSum=0.405;QD=6.94;ReadPosRankSum=0.913;VQSLOD=-0.3649;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,1:45:58.87:0,59,687	0/1:4,1:8:2.21:22,0,2	0/0:16,0:7:12.42:0,12,138	0/1:14,0:8:20.16:20,0,42	0/0:17,0:17:36.49:0,36,431	0/0:23,0:23:59.10:0,59,752	0/1:15,1:21:4.55:5,0,101	0/1:11,16:27:20.55:329,0,21	0/0:16,0:17:40.99:0,41,432	0/0:8,0:8:3.86:0,4,31	0/0:11,0:16:11.97:0,12,121	0/0:11,0:11:13.36:0,13,202	0/1:16,0:16:4.76:5,0,52	0/0:11,0:11:8.51:0,9,57	0/0:14,0:15:39.02:0,39,501	0/0:10,0:10:23.79:0,24,264	0/0:17,0:33:35.88:0,36,277	0/0:23,1:25:32.22:0,32,738	1/1:8,6:11:20.85:201,21,0	1/1:5,10:15:15.25:208,15,0	1/1:15,10:25:21.41:324,21,0	0/0:12,0:13:24.53:0,25,357	0/0:11,0:13:25:0,25,231	0/0:29,0:29:57.16:0,57,869	0/0:15,0:15:39:0,39,472	0/1:11,9:22:37.42:215,0,37	1/1:16,2:17:16.67:181,17,0	1/1:8,3:12:3.03:56,3,0
chr10	85805948	.	AAC	A	453.82	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=1.977;DP=508;FS=21.632;HRun=0;HaplotypeScore=79.1243;InbreedingCoeff=0.6454;MQ=66.10;MQ0=6;MQRankSum=-0.829;QD=7.82;ReadPosRankSum=1.739;VQSLOD=1.3239;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:62.63:0,63,447	0/0:9,0:9:0.49:0,0,100	0/0:21,0:10:29.56:0,30,253	0/1:19,0:14:4.14:4,0,193	0/0:16,0:16:27.02:0,27,304	0/0:26,0:26:50.97:0,51,597	0/0:21,0:19:19.63:0,20,194	0/0:24,0:23:29.07:0,29,250	0/0:16,0:16:35.65:0,36,349	0/0:10,0:10:16.33:0,16,140	0/0:16,0:16:19.16:0,19,161	1/1:16,1:17:40.71:359,41,0	1/1:2,9:11:8.98:94,9,0	1/1:8,3:11:14.97:132,15,0	0/0:15,0:15:23.96:0,24,277	0/0:13,0:13:23.95:0,24,237	0/0:26,0:26:0.82:0,1,149	0/0:23,0:23:43.55:0,44,513	0/0:13,0:11:1.39:0,1,107	0/0:18,0:17:23.07:0,23,194	0/0:26,1:26:29.68:0,30,331	0/0:14,0:14:38.96:0,39,402	0/0:13,0:13:20.60:0,21,198	0/0:32,0:31:59.94:0,60,733	0/0:17,0:16:32.98:0,33,344	0/0:20,0:20:44.28:0,44,278	0/0:17,0:15:27.40:0,27,133	0/0:7,0:6:6.15:0,6,29
chr10	85806189	.	G	GC	6321.28	PASS	AB=0.950;AC=21;AF=0.375;AN=56;BaseQRankSum=14.479;DP=584;FS=6.790;HRun=2;HaplotypeScore=70.7301;InbreedingCoeff=0.9090;MQ=56.15;MQ0=5;MQRankSum=-8.937;QD=29.82;ReadPosRankSum=-0.568;VQSLOD=3.8191;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1635	0/0:9,0:9:24.08:0,24,298	0/0:15,0:10:22.31:0,22,263	0/1:18,1:10:16.18:16,0,248	0/0:19,0:18:54.17:0,54,670	0/0:22,0:22:60.19:0,60,744	0/0:24,0:24:66.21:0,66,818	1/1:4,29:32:87.23:1135,87,0	0/0:18,0:18:54.16:0,54,656	0/0:30,0:27:78.24:0,78,967	0/0:17,0:17:45.14:0,45,558	1/1:0,13:12:36.12:491,36,0	1/1:1,7:8:18.06:242,18,0	1/1:2,12:13:34.36:454,34,0	0/0:18,0:17:54.17:0,54,670	0/0:17,0:16:48.15:0,48,595	0/0:37,0:36:99:0,102,1262	0/0:37,2:39:65.14:0,65,1223	1/1:5,13:18:38.64:532,39,0	1/1:1,18:19:51.17:695,51,0	1/1:0,19:19:38.80:416,39,0	0/0:10,0:9:24.08:0,24,298	0/0:14,0:13:36.11:0,36,446	0/0:18,0:18:54.16:0,54,657	0/0:20,0:20:60.19:0,60,743	1/1:3,24:27:6.74:913,7,0	1/1:0,31:28:84.28:1138,84,0	1/1:0,10:9:21.07:288,21,0
chr10	85806244	.	T	TA	3084.74	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-8.329;DP=530;FS=1.862;HRun=9;HaplotypeScore=59.1131;InbreedingCoeff=0.9176;MQ=61.78;MQ0=3;MQRankSum=0.436;QD=23.19;ReadPosRankSum=1.146;VQSLOD=4.5756;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,881	1/1:3,9:12:21.06:232,21,0	0/1:7,0:6:2.84:3,0,66	0/0:9,0:7:13.85:0,14,105	0/0:28,0:28:77.97:0,78,673	0/0:24,0:24:71.97:0,72,621	0/0:18,0:18:50.99:0,51,443	0/0:44,0:42:99:0,111,956	0/0:15,0:15:38.98:0,39,339	1/1:3,31:34:90.24:995,90,0	1/1:1,23:24:63.17:697,63,0	1/1:2,6:7:12.03:133,12,0	1/1:3,4:7:15.03:159,15,0	1/1:3,11:13:30.08:332,30,0	0/0:16,0:15:47.99:0,48,417	0/0:11,0:11:32.99:0,33,286	1/1:3,24:26:66.18:730,66,0	0/0:25,0:25:29.80:0,30,487	0/0:15,0:15:32.99:0,33,286	0/0:18,0:18:47.97:0,48,413	0/0:13,0:12:29.98:0,30,257	0/0:5,0:5:15:0,15,130	0/0:25,0:25:65.96:0,66,569	0/0:5,0:5:11.99:0,12,104	0/0:18,0:18:44.97:0,45,388	0/0:21,0:20:47.94:0,48,410	0/0:34,0:34:86.93:0,87,750	0/0:16,0:15:23.96:0,24,208
chr10	85808146	.	CT	C	1661.66	PASS	AB=0.840;AC=37;AF=0.661;AN=56;BaseQRankSum=6.662;DP=509;FS=4.042;HRun=15;HaplotypeScore=74.6748;InbreedingCoeff=0.3957;MQ=71.17;MQ0=3;MQRankSum=0.294;QD=4.10;ReadPosRankSum=1.941;VQSLOD=1.3072;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,15:25:38.50:239,38,0	0/1:8,7:17:2.16:85,0,2	0/1:25,0:18:17.06:18,0,17	0/1:17,0:14:12.65:13,0,57	0/1:17,3:20:21.85:22,0,194	0/0:11,1:15:6.77:0,7,195	1/1:2,13:17:30.62:184,31,0	1/1:8,0:20:23.09:66,23,0	0/1:15,4:19:32.43:32,0,200	1/1:10,12:22:26.40:173,26,0	1/1:8,12:21:28.40:181,28,0	1/1:3,0:10:13.28:37,13,0	1/1:4,0:21:33.28:100,33,0	1/1:1,0:9:10.17:29,10,0	0/0:27,1:29:53.02:0,53,462	0/0:15,0:15:26.98:0,27,230	1/1:9,18:28:17:229,17,0	0/1:15,3:18:5.59:6,0,191	1/1:4,1:13:21.27:72,21,0	1/1:6,0:24:29.74:87,30,0	1/1:6,0:12:10.15:29,10,0	0/0:17,2:19:22.68:0,23,314	0/1:14,3:18:31.13:31,0,153	0/0:13,2:17:1.38:0,1,160	0/0:6,0:9:5.88:0,6,87	1/1:4,0:20:32.58:94,33,0	1/1:4,2:16:23.98:91,24,0	1/1:2,0:7:10:29,10,0
chr10	85809135	.	TG	T	1044.50	PASS	AB=0.941;AC=15;AF=0.268;AN=56;BaseQRankSum=3.853;DP=335;FS=3.186;HRun=7;HaplotypeScore=47.1569;InbreedingCoeff=0.8445;MQ=81.81;MQ0=9;MQRankSum=-2.419;QD=14.71;ReadPosRankSum=-0.501;VQSLOD=2.9321;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.20:0,66,830	0/0:7,0:7:15.05:0,15,187	0/1:15,0:11:4.60:5,0,234	0/0:25,0:21:53.39:0,53,550	0/0:4,0:4:12.04:0,12,151	0/0:12,0:12:30.08:0,30,364	0/0:18,0:18:45.13:0,45,552	1/1:3,3:4:9.02:92,9,0	0/0:9,0:9:27.08:0,27,328	0/0:20,0:20:50.66:0,51,640	0/0:9,0:9:15.01:0,15,188	0/0:9,0:9:24.08:0,24,302	0/0:18,0:18:54.17:0,54,673	0/0:15,0:15:36.12:0,36,452	0/0:15,0:15:42.13:0,42,522	0/0:5,0:5:15.05:0,15,189	0/0:15,0:15:45.06:0,45,545	0/0:12,0:12:33.44:0,33,378	1/1:1,2:2:6.01:61,6,0	1/1:0,5:5:15.03:153,15,0	1/1:4,15:19:30.07:306,30,0	0/0:8,0:8:21.07:0,21,264	0/0:7,0:7:21.07:0,21,263	0/0:24,0:23:60.15:0,60,737	0/0:4,0:4:12.04:0,12,149	1/1:1,11:12:33.07:337,33,0	1/1:0,8:8:24.05:245,24,0	1/1:1,1:2:3.01:31,3,0
chr10	85809201	.	T	TAC	1143.88	PASS	AB=0.927;AC=26;AF=0.500;AN=52;BaseQRankSum=2.168;DP=565;FS=3.772;HRun=0;HaplotypeScore=126.2181;InbreedingCoeff=0.3907;MQ=62.47;MQ0=13;MQRankSum=-2.374;QD=3.52;ReadPosRankSum=-0.350;VQSLOD=2.6848;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:35:17.81:113,18,0	1/1:4,2:7:6.02:91,6,0	./.	./.	0/0:10,0:11:5.85:0,6,47	0/1:14,0:17:29.71:31,0,30	0/1:30,0:28:0.89:49,0,1	1/1:31,0:27:0.24:21,0,0	0/0:10,0:11:17.86:0,18,170	0/1:18,2:19:29.70:173,0,30	1/1:4,3:7:9.03:136,9,0	1/1:24,0:24:8.96:73,9,0	1/1:20,0:20:23.83:189,24,0	1/1:22,0:21:8.56:48,9,0	0/0:19,0:20:23.66:0,24,209	0/0:12,0:12:20.48:0,20,168	0/1:15,16:32:76.88:177,0,77	0/0:12,0:27:36.93:0,37,180	1/1:4,0:4:0.47:1,0,0	0/0:9,0:13:0:0,0,1	1/1:38,0:35:5.97:46,6,0	0/0:12,0:13:18.04:0,18,192	0/0:7,0:6:5.91:0,6,49	0/0:43,0:46:74.47:0,74,738	0/0:16,0:16:24.94:0,25,257	0/1:15,0:15:21.18:21,0,22	1/1:11,1:15:13.10:138,13,0	0/1:7,0:7:11.90:12,0,25
chr10	85809230	.	A	ATG	1121.26	PASS	AB=0.922;AC=8;AF=0.143;AN=56;BaseQRankSum=6.856;DP=735;FS=7.404;HRun=0;HaplotypeScore=172.5108;InbreedingCoeff=0.3459;MQ=46.03;MQ0=28;MQRankSum=-4.938;QD=8.37;ReadPosRankSum=-0.629;VQSLOD=2.4385;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:46:87.22:0,87,1196	0/0:6,0:6:2.80:0,3,6	0/0:12,0:3:6.02:0,6,94	0/0:22,0:8:18.03:0,18,251	0/0:17,0:16:32.66:0,33,460	0/0:18,0:18:42.08:0,42,539	0/0:39,0:36:50.99:0,51,724	0/0:37,0:29:69.81:0,70,1095	0/0:25,0:25:50.91:0,51,726	0/0:22,0:20:51.05:0,51,678	0/0:13,0:13:31.45:0,31,418	1/1:14,14:29:11.82:218,12,0	1/1:19,11:27:38.02:646,38,0	0/1:17,14:30:10.10:164,0,10	0/0:29,0:28:69.21:0,69,1028	0/0:13,0:13:33.10:0,33,488	0/0:43,0:43:67.81:0,68,888	0/0:34,0:33:80.91:0,81,901	0/1:13,0:9:53.79:54,0,116	0/0:14,0:14:2.97:0,3,45	0/0:70,0:64:26.96:0,27,367	0/0:18,0:16:36.10:0,36,565	0/0:16,0:15:24.07:0,24,348	0/0:56,0:56:99:0,150,2224	0/0:20,0:20:54.16:0,54,811	0/0:29,0:26:3.58:0,4,627	0/1:20,0:20:84.43:84,0,202	0/1:11,0:10:98.06:98,0,193
chr10	85809252	.	ATG	A	278.70	PASS	AB=0.737;AC=7;AF=0.125;AN=56;BaseQRankSum=10.342;DP=770;FS=4.349;HRun=0;HaplotypeScore=193.7660;InbreedingCoeff=-0.1507;MQ=44.84;MQ0=26;MQRankSum=-8.611;QD=1.50;ReadPosRankSum=-3.578;VQSLOD=1.4071;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,1:47:99:0,100,1940	0/0:5,0:5:9.03:0,9,182	0/0:20,0:5:15.05:0,15,281	0/0:40,0:10:30.10:0,30,540	0/0:20,0:19:42.13:0,42,816	0/0:12,0:12:12.07:0,12,546	0/0:46,1:45:64.19:0,64,1646	0/1:39,8:34:58.71:59,0,1051	0/0:32,0:32:78:0,78,1557	0/0:21,0:20:40.17:0,40,890	0/0:14,0:14:36.12:0,36,703	0/1:16,11:27:2.40:2,0,81	0/1:14,24:35:97.87:98,0,180	0/0:15,14:28:4.73:0,5,68	0/0:31,1:30:80.31:0,80,1576	0/0:8,1:9:19.71:0,20,394	0/0:34,1:35:76.10:0,76,1437	0/0:30,0:29:70.66:0,71,1329	0/1:11,4:11:39.29:39,0,207	0/0:10,8:18:5.29:0,5,66	0/0:55,8:57:22.62:0,23,399	0/0:16,0:15:35.46:0,35,552	0/0:17,1:17:33.11:0,33,667	0/0:57,0:57:99:0,115,2870	0/0:17,0:17:48.13:0,48,842	0/1:15,8:21:74.49:74,0,478	0/1:15,10:23:93.73:94,0,207	0/1:7,4:10:37:37,0,144
chr10	85809258	.	A	ATG	1443.73	PASS	AB=0.742;AC=10;AF=0.179;AN=56;BaseQRankSum=10.817;DP=800;FS=0.500;HRun=0;HaplotypeScore=201.0534;InbreedingCoeff=-0.2197;MQ=45.54;MQ0=27;MQRankSum=-9.901;QD=4.72;ReadPosRankSum=-5.071;VQSLOD=1.6366;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:99:0,105,1684	0/0:5,0:5:9.03:0,9,147	0/0:30,0:7:21.07:0,21,323	0/0:45,0:12:33.06:0,33,480	0/0:18,0:17:38.73:0,39,636	0/0:12,0:12:33.11:0,33,530	0/0:51,0:48:96.09:0,96,1504	0/1:40,8:37:99:403,0,759	0/0:32,0:32:84.26:0,84,1317	0/0:22,0:20:51.16:0,51,795	0/0:13,0:13:36.12:0,36,587	0/1:18,10:28:14.10:14,0,61	0/1:14,24:35:84.34:251,0,84	0/1:17,14:30:52.40:85,0,52	0/0:34,0:32:84.24:0,84,1331	0/0:9,0:9:24.08:0,24,391	0/0:34,0:34:78.27:0,78,1266	0/0:34,0:33:86.78:0,87,1338	0/1:12,4:12:99:147,0,165	0/1:11,8:19:40.49:45,0,40	0/1:59,9:62:47.59:48,0,269	0/0:17,0:16:39.11:0,39,628	0/0:18,0:18:33.11:0,33,538	0/0:53,0:53:99:0,147,2326	0/0:17,0:17:48.16:0,48,772	0/1:15,8:21:99:226,0,347	0/1:14,10:22:99:215,0,132	0/1:6,5:10:99:156,0,118
chr10	85809470	.	AT	A	3136.83	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=8.842;DP=565;FS=5.197;HRun=10;HaplotypeScore=57.8593;InbreedingCoeff=0.8430;MQ=58.77;MQ0=9;MQRankSum=0.750;QD=15.68;ReadPosRankSum=3.334;VQSLOD=4.1237;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,41:45:85.18:866,85,0	1/1:0,4:4:8.99:78,9,0	0/1:16,0:10:12.23:12,0,127	0/0:13,0:8:15.64:0,16,132	0/0:19,1:21:27.94:0,28,512	0/0:11,0:11:33.09:0,33,365	1/1:7,12:19:29.97:260,30,0	0/0:31,0:31:83.38:0,83,875	0/0:31,0:31:81.22:0,81,896	1/1:6,25:29:68.98:599,69,0	1/1:0,11:11:26.99:234,27,0	1/1:4,13:17:32.99:286,33,0	1/1:2,13:15:2.81:252,3,0	1/1:3,15:17:41.99:364,42,0	0/0:24,0:23:66.17:0,66,724	0/0:15,0:15:42.11:0,42,465	1/1:2,21:23:44.99:390,45,0	0/0:35,0:35:93.25:0,93,1028	0/0:23,1:22:25.08:0,25,505	0/0:11,0:11:21.06:0,21,232	0/0:11,2:13:1.10:0,1,240	0/0:12,0:12:10.06:0,10,335	0/0:17,0:16:42.11:0,42,461	0/0:31,2:32:78.20:0,78,855	0/0:11,0:10:27.07:0,27,299	0/0:29,2:30:28.74:0,29,734	0/0:19,0:18:31.19:0,31,540	0/0:11,0:11:30.07:0,30,324
chr10	85810331	.	AGGAGGGGAGGG	A	636.57	PASS	AB=0.576;AC=1;AF=0.018;AN=56;BaseQRankSum=4.843;DP=668;FS=0.000;HRun=0;HaplotypeScore=205.0613;InbreedingCoeff=-0.0203;MQ=81.56;MQ0=3;MQRankSum=-3.942;QD=33.50;ReadPosRankSum=1.899;VQSLOD=2.9970;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,5096	0/0:12,0:12:30.10:0,30,1577	0/0:34,0:27:47.88:0,48,1373	0/0:29,0:27:38.03:0,38,1306	0/0:30,0:30:84.26:0,84,3999	0/0:26,0:26:69.24:0,69,3708	0/0:37,0:37:99:0,99,4179	0/0:31,0:30:60.16:0,60,2277	0/0:26,0:26:72.20:0,72,3314	0/0:18,0:18:45.14:0,45,2001	0/0:22,0:22:38.59:0,39,1621	0/0:18,0:18:36.12:0,36,1837	0/0:15,0:15:42.13:0,42,1829	0/0:21,0:21:60.19:0,60,2942	0/0:25,0:25:66.23:0,66,3319	0/0:18,0:18:48.16:0,48,2520	0/0:36,0:36:96.30:0,96,4549	0/1:5,14:19:99:711,0,131	0/0:15,0:15:33.09:0,33,1547	0/0:20,0:20:51.16:0,51,2490	0/0:26,0:26:63.19:0,63,2833	0/0:29,0:29:78.17:0,78,3870	0/0:20,0:20:54.17:0,54,2789	0/0:20,0:20:51.17:0,51,2716	0/0:23,0:23:60.21:0,60,2973	0/0:34,0:34:75.23:0,75,3449	0/0:21,0:21:57.17:0,57,2716	0/0:3,0:3:9.03:0,9,502
chr10	85810678	.	G	GAC	2360.92	PASS	AB=0.957;AC=14;AF=0.250;AN=56;BaseQRankSum=-3.058;DP=749;FS=0.897;HRun=0;HaplotypeScore=132.8736;InbreedingCoeff=0.2858;MQ=59.24;MQ0=7;MQRankSum=0.690;QD=8.03;ReadPosRankSum=-0.194;VQSLOD=3.4944;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:81.25:0,81,982	0/1:7,6:13:30.73:295,0,31	0/0:21,0:13:13.93:0,14,244	0/0:32,0:14:20.09:0,20,201	0/0:25,0:24:51.12:0,51,592	0/0:13,0:15:30.09:0,30,363	0/0:25,0:25:43.15:0,43,606	0/1:31,0:27:64.25:64,0,204	0/0:30,0:30:65.20:0,65,745	1/1:12,26:35:23.48:1177,23,0	1/1:7,17:24:18.06:291,18,0	0/1:37,0:37:99:131,0,260	0/1:21,0:21:56.22:56,0,140	0/1:10,0:10:0:0,0,0	0/0:30,0:33:74.82:0,75,884	0/0:26,0:27:69.03:0,69,801	1/1:13,22:35:5.24:375,5,0	0/0:15,0:15:23.11:0,23,352	0/1:11,0:9:6.26:6,0,74	0/0:22,0:22:13.52:0,14,237	0/1:34,0:33:99:123,0,208	0/0:29,0:31:45.29:0,45,725	0/1:33,1:35:2.56:3,0,573	0/0:36,0:36:74.77:0,75,891	0/0:21,0:21:35.46:0,35,391	0/0:31,0:30:9.10:0,9,323	0/0:34,0:33:24.60:0,25,400	0/0:12,0:12:11.67:0,12,88
chr10	85810680	.	C	CAG	1318.10	PASS	AB=0.925;AC=8;AF=0.143;AN=56;BaseQRankSum=5.495;DP=749;FS=5.494;HRun=0;HaplotypeScore=137.4395;InbreedingCoeff=0.0735;MQ=58.71;MQ0=6;MQRankSum=0.376;QD=7.16;ReadPosRankSum=2.922;VQSLOD=3.1425;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,1439	0/1:13,0:13:99:119,0,117	0/0:24,0:15:29.19:0,29,413	0/0:27,0:11:23.73:0,24,282	0/0:27,0:26:63.14:0,63,861	0/0:16,0:15:39.06:0,39,524	0/0:26,0:26:38.25:0,38,867	0/0:32,0:28:73.65:0,74,810	0/0:31,0:31:87.16:0,87,1126	0/1:39,0:36:99:463,0,121	0/1:25,0:25:65.82:119,0,66	0/1:25,13:38:48.81:364,0,49	0/1:16,5:21:49.61:188,0,50	1/1:7,4:11:5.87:40,6,0	0/0:35,0:34:77.95:0,78,1196	0/0:27,0:27:78.01:0,78,1086	0/1:37,0:34:99:160,0,126	0/0:13,0:13:38.66:0,39,508	0/0:10,0:9:18.36:0,18,275	0/0:22,0:22:53.44:0,53,654	0/0:37,0:34:25.08:0,25,632	0/0:31,0:31:59.35:0,59,1046	0/0:35,0:35:52.47:0,52,1027	0/0:35,0:34:89.72:0,90,1244	0/0:21,0:21:50.77:0,51,639	0/0:31,0:30:86.39:0,86,1055	0/0:35,0:34:74.68:0,75,1096	0/0:10,0:10:20.74:0,21,238
chr10	85810682	.	C	CAG	1166.46	PASS	AB=0.892;AC=7;AF=0.125;AN=56;BaseQRankSum=6.173;DP=753;FS=9.913;HRun=0;HaplotypeScore=138.4893;InbreedingCoeff=-0.1205;MQ=60.20;MQ0=4;MQRankSum=1.457;QD=6.37;ReadPosRankSum=3.422;VQSLOD=2.5882;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1471	0/1:13,0:13:99:114,0,120	0/0:26,0:16:37.13:0,37,416	0/0:26,0:12:17.46:0,17,277	0/0:28,0:27:63.12:0,63,865	0/0:16,0:15:39.07:0,39,528	0/0:27,0:27:80.64:0,81,977	0/0:30,0:27:63.59:0,64,729	0/0:31,0:31:87.10:0,87,1140	0/1:38,0:35:99:469,0,133	0/1:24,0:25:89.78:116,0,90	0/1:26,13:39:99:238,0,115	0/1:15,5:20:63.92:183,0,64	0/1:7,4:11:10.79:19,0,11	0/0:35,0:34:93.17:0,93,1262	0/0:27,0:27:78.17:0,78,1099	0/1:37,0:34:99:157,0,124	0/0:13,0:13:38.67:0,39,512	0/0:11,0:10:23.91:0,24,272	0/0:22,0:22:53.92:0,54,656	0/0:40,0:37:39.26:0,39,747	0/0:31,0:31:90.16:0,90,1120	0/0:36,0:36:68.77:0,69,1072	0/0:34,0:34:92.64:0,93,1268	0/0:21,0:21:48.06:0,48,627	0/0:32,0:31:85.93:0,86,1062	0/0:35,0:34:81.62:0,82,1116	0/0:9,0:9:20.73:0,21,236
chr10	85810822	.	A	AAC	2393.16	PASS	AB=0.744;AC=9;AF=0.161;AN=56;BaseQRankSum=-6.584;DP=857;FS=2.245;HRun=0;HaplotypeScore=115.5256;InbreedingCoeff=0.5515;MQ=58.35;MQ0=20;MQRankSum=3.014;QD=16.62;ReadPosRankSum=1.518;VQSLOD=3.9243;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:44:80.85:0,81,889	1/1:3,7:10:15.04:218,15,0	0/0:51,0:12:6.01:0,6,65	0/0:56,0:24:1.97:0,2,99	0/0:29,0:29:48.12:0,48,555	0/0:24,0:24:60.10:0,60,678	0/0:28,0:28:59.88:0,60,645	0/0:39,0:38:65.65:0,66,669	0/0:29,0:30:37.98:0,38,632	0/1:18,20:37:40.87:665,0,41	1/1:4,16:20:30.10:453,30,0	0/0:33,0:33:66.12:0,66,700	0/0:22,0:22:53.98:0,54,600	0/0:12,0:12:23.98:0,24,241	0/0:34,0:34:77.94:0,78,874	0/0:22,0:22:51.09:0,51,575	1/1:14,10:21:36.09:546,36,0	0/1:11,17:28:31.78:659,0,32	0/0:25,0:23:32.47:0,32,295	0/0:27,0:29:56.96:0,57,630	0/0:50,0:49:99:0,102,1206	0/0:40,0:40:54.06:0,54,810	0/0:31,0:32:26.65:0,27,713	0/0:31,0:33:65.75:0,66,730	0/1:22,0:23:6.33:6,0,363	0/0:40,0:40:12.14:0,12,711	0/0:20,0:21:44.86:0,45,489	0/0:15,0:15:14.78:0,15,119
chr10	85810917	.	GAAAC	G	1115.27	PASS	AB=0.969;AC=3;AF=0.054;AN=56;BaseQRankSum=6.495;DP=752;FS=2.689;HRun=0;HaplotypeScore=147.2785;InbreedingCoeff=0.6048;MQ=66.92;MQ0=6;MQRankSum=0.517;QD=21.45;ReadPosRankSum=1.625;VQSLOD=3.7487;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:99:221,0,202	0/0:11,0:11:30.03:0,30,659	0/0:48,0:23:36.24:0,36,408	0/0:57,0:38:17.46:0,17,563	0/0:25,0:25:65.83:0,66,1426	0/0:17,0:17:51.16:0,51,1241	0/0:23,1:23:31.34:0,31,281	0/0:41,0:41:99:0,114,2327	0/0:19,0:19:51.12:0,51,1052	0/0:23,0:23:66.19:0,66,1527	0/0:14,0:14:29.12:0,29,747	0/0:19,0:19:53.91:0,54,934	0/0:8,0:8:7.09:0,7,351	0/0:19,0:19:50.97:0,51,871	0/0:26,0:26:78.16:0,78,1581	0/0:20,0:20:57.13:0,57,1204	0/0:22,0:22:24.03:0,24,1058	1/1:14,7:20:49.16:1001,49,0	0/0:25,0:25:68.48:0,68,1180	0/0:36,0:36:99:0,100,1989	0/0:59,0:59:99:0,165,3650	0/0:26,0:26:78.20:0,78,1714	0/0:27,0:27:72.04:0,72,1484	0/0:38,0:37:99:0,102,2100	0/0:29,0:29:73.57:0,74,1857	0/0:24,0:24:69.21:0,69,1589	0/0:22,0:22:66.19:0,66,1515	0/0:20,0:20:57.18:0,57,1403
chr10	85810919	.	AACAG	A	997.27	PASS	AB=0.752;AC=4;AF=0.071;AN=56;BaseQRankSum=5.387;DP=746;FS=4.598;HRun=0;HaplotypeScore=146.0709;InbreedingCoeff=0.6491;MQ=65.05;MQ0=10;MQRankSum=2.781;QD=13.48;ReadPosRankSum=2.591;VQSLOD=3.3417;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,7:30:9.42:554,0,9	0/0:11,0:11:24.08:0,24,502	0/0:46,0:21:16.82:0,17,291	0/0:53,0:34:20.05:0,20,316	0/0:24,0:24:56.85:0,57,1199	0/0:18,0:18:51.17:0,51,1128	0/1:12,10:21:0.26:15,0,0	0/0:39,0:39:75.05:0,75,1749	0/0:19,0:19:36.12:0,36,790	0/0:24,0:24:54.18:0,54,1236	0/0:15,0:15:29.68:0,30,581	0/0:19,0:19:38.87:0,39,752	0/0:7,0:7:12.04:0,12,289	0/0:19,0:19:39.04:0,39,702	0/0:26,0:26:51.17:0,51,1164	0/0:22,0:22:51.17:0,51,1068	0/0:22,0:22:45.58:0,46,921	1/1:21,0:20:48.12:543,48,0	0/0:24,0:24:36.11:0,36,781	0/0:35,0:35:69.02:0,69,1502	0/0:60,0:59:99:0,129,2847	0/0:27,0:26:60.20:0,60,1321	0/0:25,0:25:51.17:0,51,1128	0/0:39,0:38:76.81:0,77,1641	0/0:29,0:29:58.55:0,59,1485	0/0:26,0:26:63.22:0,63,1457	0/0:21,0:21:57.19:0,57,1233	0/0:19,0:19:51.18:0,51,1188
chr10	85812227	.	T	TAGGTCTCACGCTT	1309.50	PASS	AB=0.775;AC=26;AF=0.929;AN=28;BaseQRankSum=-2.331;DP=35;FS=3.056;HRun=0;HaplotypeScore=19.2081;InbreedingCoeff=-0.2502;MQ=141.36;MQ0=0;MQRankSum=-1.071;QD=42.24;ReadPosRankSum=-1.323;VQSLOD=2.2895;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:1:3.01:56,3,0	./.	0/1:6,1:8:13.64:342,0,14	0/1:4,0:6:5.76:265,0,6	./.	1/1:1,0:1:3.01:56,3,0	./.	1/1:2,0:2:3.01:57,3,0	1/1:1,0:2:3.01:56,3,0	1/1:0,0:1:3.01:156,3,0	./.	1/1:2,0:2:6.01:82,6,0	1/1:0,0:1:3.01:56,3,0	1/1:1,0:1:3.01:75,3,0	./.	./.	./.	1/1:0,0:1:3.01:72,3,0	./.	./.	1/1:1,0:2:3.01:41,3,0	1/1:1,0:1:3.01:57,3,0	1/1:1,0:2:3:25,3,0	./.	./.	./.	./.	./.
chr10	85812438	.	AAC	A	689.80	PASS	AB=0.921;AC=34;AF=0.680;AN=50;BaseQRankSum=6.683;DP=475;FS=8.339;HRun=0;HaplotypeScore=86.6346;InbreedingCoeff=0.2624;MQ=65.06;MQ0=18;MQRankSum=-3.268;QD=2.40;ReadPosRankSum=-0.421;VQSLOD=1.1469;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,9:29:11.87:113,12,0	1/1:4,0:5:2.84:14,3,0	./.	0/0:52,0:21:0:0,0,0	0/1:5,1:6:27.04:27,0,39	0/1:20,1:20:20.78:21,0,339	1/1:16,9:25:14.87:146,15,0	./.	0/0:19,2:21:24:0,24,312	1/1:5,0:5:2.84:14,3,0	1/1:3,0:5:2.74:12,3,0	1/1:9,0:23:25.67:130,26,0	1/1:7,0:10:5.68:28,6,0	1/1:7,0:11:2.84:14,3,0	0/0:26,0:26:33.09:0,33,447	0/1:11,2:13:39.04:39,0,267	1/1:20,0:27:7.45:32,7,0	1/1:5,0:15:25.57:126,26,0	1/1:7,0:8:2.84:14,3,0	1/1:3,0:6:0.75:2,1,0	0/1:23,0:27:0.01:0,0,0	0/1:11,0:11:8.63:9,0,34	0/1:8,0:8:15.22:15,0,81	0/0:29,3:32:6.04:0,6,454	0/0:8,0:8:9.03:0,9,135	1/1:10,0:10:5.68:28,6,0	1/1:7,0:15:11.36:56,11,0	./.
chr10	85812815	.	TA	T	1643.40	PASS	AB=1.000;AC=16;AF=0.308;AN=52;BaseQRankSum=3.500;DP=360;FS=14.965;HRun=6;HaplotypeScore=51.0306;InbreedingCoeff=0.7079;MQ=50.29;MQ0=7;MQRankSum=-0.739;QD=13.36;ReadPosRankSum=2.920;VQSLOD=1.4780;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:21:6.97:0,7,128	0/0:7,0:7:4.85:0,5,29	./.	0/0:9,0:2:5.88:0,6,54	0/0:12,0:12:35.90:0,36,384	0/0:9,0:9:23.99:0,24,276	0/0:15,0:14:14.22:0,14,154	1/1:5,13:15:29.94:283,30,0	0/0:15,0:14:36.03:0,36,421	0/0:18,0:18:32.01:0,32,187	0/1:14,0:11:5.19:5,0,14	0/0:13,0:13:5.35:0,5,31	0/1:11,0:11:0.80:1,0,17	0/0:6,0:6:8.60:0,9,50	0/0:11,0:10:4.36:0,4,14	0/0:8,0:8:4.11:0,4,29	0/0:28,0:28:3.48:0,3,169	0/0:19,0:19:38.40:0,38,462	1/1:5,17:19:48.62:455,49,0	1/1:0,7:7:15.04:161,15,0	1/1:6,7:10:15:148,15,0	./.	0/0:9,0:8:14.83:0,15,188	0/0:12,0:12:27.39:0,27,357	0/0:12,0:12:24.81:0,25,233	1/1:4,14:18:39.89:417,40,0	1/1:6,11:17:24.06:257,24,0	1/1:0,3:3:9.02:97,9,0
chr10	85812821	.	AG	A	2206.51	PASS	AB=0.923;AC=32;AF=0.615;AN=52;BaseQRankSum=6.946;DP=385;FS=6.281;HRun=10;HaplotypeScore=51.6511;InbreedingCoeff=0.2580;MQ=48.88;MQ0=12;MQRankSum=2.911;QD=7.38;ReadPosRankSum=4.042;VQSLOD=1.1006;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,22:23:29.97:260,30,0	1/1:2,5:7:12:104,12,0	./.	0/0:9,0:2:3.01:0,3,33	0/0:14,0:14:21.06:0,21,232	0/0:11,0:11:18.05:0,18,199	0/1:7,8:14:12.22:135,0,12	0/1:18,0:15:29.22:29,0,60	0/0:19,0:18:27.54:0,28,299	1/1:7,14:21:5.73:270,6,0	1/1:6,9:12:18:156,18,0	1/1:2,11:13:23.97:208,24,0	1/1:1,10:11:24:208,24,0	1/1:2,5:7:8.99:78,9,0	1/1:1,11:11:12.28:171,12,0	1/1:1,6:7:17.99:156,18,0	1/1:10,18:25:10.81:311,11,0	0/1:17,2:19:13.21:13,0,305	0/1:23,0:19:21.12:60,0,21	0/1:10,0:10:24.27:24,0,27	1/1:16,0:12:11.80:46,12,0	./.	0/1:10,1:10:10.94:11,0,110	0/0:13,1:13:6.26:0,6,258	0/0:11,0:11:12.03:0,12,131	0/1:19,2:21:47.51:81,0,48	0/1:13,0:13:13.95:40,0,14	1/1:5,0:3:6.81:23,7,0
chr10	85813025	.	GT	G	2187.52	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=12.270;DP=528;FS=5.368;HRun=3;HaplotypeScore=71.3860;InbreedingCoeff=0.9826;MQ=68.07;MQ0=6;MQRankSum=-1.614;QD=13.59;ReadPosRankSum=-0.967;VQSLOD=2.0660;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.12:0,90,1176	0/0:9,0:8:24.08:0,24,343	0/0:25,0:16:10.93:0,11,292	0/0:22,0:12:11.38:0,11,184	0/0:28,0:28:75.09:0,75,1081	0/0:17,0:18:48.16:0,48,665	0/0:17,0:17:48.09:0,48,614	1/1:25,0:20:40.74:272,41,0	0/0:20,0:21:48.13:0,48,652	0/0:29,0:29:84.28:0,84,1180	0/0:20,0:20:54.18:0,54,774	1/1:0,11:11:24.08:297,24,0	1/1:1,12:13:33.10:403,33,0	1/1:0,12:12:24.08:296,24,0	0/0:12,0:12:27.07:0,27,360	0/0:20,0:20:57.17:0,57,782	0/0:27,0:26:75.21:0,75,1038	0/0:24,0:24:66.15:0,66,901	1/1:14,0:14:35.95:181,36,0	1/1:20,0:20:49.57:238,50,0	1/1:5,0:5:13.78:61,14,0	0/0:10,0:10:30.04:0,30,388	0/0:14,0:14:42.14:0,42,585	0/0:16,0:16:45.15:0,45,644	0/0:24,0:24:69.22:0,69,970	1/1:27,0:27:21.69:301,22,0	1/1:23,0:23:58.21:267,58,0	1/1:11,0:11:17.19:93,17,0
chr10	85813027	.	T	TA	2992.44	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.228;DP=539;FS=8.517;HRun=0;HaplotypeScore=71.3371;InbreedingCoeff=0.9741;MQ=68.98;MQ0=5;MQRankSum=-0.266;QD=23.02;ReadPosRankSum=-1.279;VQSLOD=4.0999;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.22:0,90,1209	0/0:9,0:8:24.08:0,24,333	0/0:27,0:17:9.14:0,9,285	0/0:23,0:13:15.74:0,16,234	0/0:27,0:27:81.26:0,81,1105	0/0:18,0:18:48.16:0,48,670	0/0:18,0:18:51.09:0,51,666	1/1:15,11:23:19.99:341,20,0	0/0:21,0:21:48.16:0,48,668	0/0:29,0:29:87.29:0,87,1199	0/0:20,0:20:54.18:0,54,755	0/0:13,0:13:17.76:0,18,56	0/0:13,0:13:24.88:0,25,81	0/0:12,0:12:17.76:0,18,57	0/0:12,0:12:27.09:0,27,376	0/0:21,0:21:57.19:0,57,796	0/0:27,0:26:75.25:0,75,1047	0/0:25,0:25:69.21:0,69,939	1/1:1,14:15:41.37:438,41,0	1/1:3,16:19:49.95:550,50,0	1/1:0,6:6:15.04:165,15,0	0/0:10,0:10:30.09:0,30,399	0/0:15,0:15:45.14:0,45,602	0/0:16,0:16:45.15:0,45,629	0/0:23,0:23:69.23:0,69,965	1/1:7,22:29:20.29:724,20,0	1/1:4,20:24:64.84:691,65,0	1/1:1,10:11:13.18:279,13,0
chr10	85813438	.	A	AT	4276.23	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.755;DP=596;FS=3.912;HRun=6;HaplotypeScore=63.4671;InbreedingCoeff=0.9876;MQ=77.75;MQ0=0;MQRankSum=0.410;QD=33.15;ReadPosRankSum=-0.824;VQSLOD=4.6843;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,165,1643	0/0:11,0:11:33.07:0,33,335	0/0:9,0:9:10.84:0,11,97	0/0:19,0:19:29:0,29,293	0/0:27,0:27:69.12:0,69,686	0/0:27,0:27:78.13:0,78,776	0/0:22,0:22:63.12:0,63,630	1/1:1,20:21:60.15:714,60,0	0/0:17,0:17:42.09:0,42,428	0/0:31,0:31:87.17:0,87,872	0/0:17,0:17:39.08:0,39,398	0/0:24,0:24:69.14:0,69,696	0/0:17,1:18:13.37:0,13,447	0/0:23,0:23:69.12:0,69,686	0/0:22,0:22:57.10:0,57,569	0/0:14,0:14:33.06:0,33,330	0/0:36,0:36:99:0,102,1015	0/0:35,0:35:99:0,102,1014	1/1:3,8:11:29.99:326,30,0	1/1:0,21:21:63.17:773,63,0	1/1:2,24:26:69.22:868,69,0	0/0:19,0:19:57.09:0,57,571	0/0:13,0:13:30.05:0,30,301	0/0:18,0:18:48.09:0,48,483	0/0:9,0:8:27.06:0,27,275	1/1:2,20:22:60.18:740,60,0	1/1:1,18:18:45.13:553,45,0	1/1:1,8:9:24.08:302,24,0
chr10	85814341	.	A	AG	2026.05	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.490;DP=718;FS=0.000;HRun=4;HaplotypeScore=98.4442;InbreedingCoeff=0.9988;MQ=90.29;MQ0=0;MQRankSum=-1.858;QD=29.36;ReadPosRankSum=1.978;VQSLOD=3.3927;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,162,1833	0/0:9,0:9:24.07:0,24,272	0/0:34,0:34:87.18:0,87,953	0/0:26,0:25:41.25:0,41,566	0/0:31,0:31:90.26:0,90,1020	0/0:21,0:21:57.16:0,57,643	0/0:23,0:23:66.19:0,66,748	0/0:23,0:23:66.18:0,66,739	0/0:30,0:30:84.24:0,84,953	0/0:19,0:19:51.14:0,51,576	0/0:17,0:17:48.13:0,48,543	1/1:4,27:31:75.25:1020,75,0	1/1:0,18:18:39.13:534,39,0	1/1:0,20:20:45.15:615,45,0	0/0:25,0:25:69.20:0,69,782	0/0:18,0:18:48.12:0,48,535	0/0:51,0:51:99:0,147,1653	0/0:17,0:17:45.09:0,45,496	0/0:22,0:22:60.15:0,60,665	0/0:17,0:17:45.13:0,45,510	0/0:57,0:57:99:0,155,1730	0/0:21,0:21:57.63:0,58,647	0/0:21,0:21:57.16:0,57,646	0/0:28,0:28:72.20:0,72,816	0/0:17,0:17:51.15:0,51,578	0/0:22,0:22:57.16:0,57,644	0/0:34,0:34:99:0,99,1120	0/0:9,0:9:27.06:0,27,296
chr10	85815599	.	G	GT	2866.13	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=6.694;DP=432;FS=17.091;HRun=3;HaplotypeScore=62.8297;InbreedingCoeff=0.6619;MQ=69.69;MQ0=2;MQRankSum=-1.330;QD=15.83;ReadPosRankSum=-0.820;VQSLOD=2.0006;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:27:9.56:10,0,195	0/0:4,0:3:8.58:0,9,51	0/0:22,0:12:3.81:0,4,96	0/1:14,0:10:5.47:5,0,68	0/0:27,0:27:62.83:0,63,655	0/0:19,0:19:57.08:0,57,598	0/0:14,0:14:1.70:0,2,113	1/1:5,26:30:69.41:632,69,0	0/0:13,0:13:30.02:0,30,311	0/0:20,0:20:35.39:0,35,235	0/0:18,0:18:15.12:0,15,132	0/0:6,0:6:4.66:0,5,19	0/0:11,0:11:19.10:0,19,83	0/0:8,0:8:6.74:0,7,42	0/0:12,0:12:33.08:0,33,374	0/0:11,0:11:29.09:0,29,301	0/0:10,0:10:19.65:0,20,119	0/1:20,0:20:12.29:12,0,70	1/1:1,10:11:30.03:347,30,0	1/1:1,16:17:46:559,46,0	1/1:0,7:7:9.03:114,9,0	0/0:10,0:10:24.05:0,24,266	0/0:17,0:17:42.07:0,42,456	0/0:12,0:12:27.05:0,27,298	0/0:17,0:17:45.05:0,45,482	1/1:1,18:19:55.82:560,56,0	1/1:2,25:28:54:666,54,0	1/1:0,6:6:12.04:153,12,0
chr10	85815602	.	T	TAA	1884.48	PASS	AB=0.592;AC=18;AF=0.321;AN=56;BaseQRankSum=-3.479;DP=451;FS=5.443;HRun=12;HaplotypeScore=79.1007;InbreedingCoeff=0.7763;MQ=71.62;MQ0=2;MQRankSum=-1.104;QD=12.32;ReadPosRankSum=0.043;VQSLOD=2.2530;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:11,1:30:17.80:113,0,18	1/1:1,5:5:6.02:84,6,0	0/0:23,0:14:14.20:0,14,117	0/0:14,0:10:23.36:0,23,168	0/0:29,0:29:57.01:0,57,530	0/0:17,0:19:38.49:0,38,329	1/1:6,1:14:10.50:68,10,0	0/0:31,0:30:33.71:0,34,222	0/0:13,0:14:29.69:0,30,257	1/1:5,17:23:35.57:526,36,0	1/1:2,15:19:44.53:543,45,0	1/1:1,0:8:6.01:57,6,0	1/1:2,0:11:24.04:229,24,0	1/1:3,0:11:18.05:199,18,0	0/0:11,0:11:27.01:0,27,250	0/0:10,0:12:32.78:0,33,289	1/1:2,8:11:17.73:221,18,0	0/1:5,0:19:15.80:43,0,16	0/0:9,0:9:20.30:0,20,77	0/0:16,0:16:36.71:0,37,147	0/0:9,0:9:13.45:0,13,62	0/0:9,0:9:21.01:0,21,194	0/0:19,0:19:12.62:0,13,280	0/0:12,0:12:27.02:0,27,248	0/0:15,0:16:35.75:0,36,317	0/0:19,0:19:29.15:0,29,139	0/0:28,0:28:48.74:0,49,188	0/0:7,0:7:10.87:0,11,36
chr10	85815711	.	T	TA	589.64	PASS	AB=0.977;AC=6;AF=0.107;AN=56;BaseQRankSum=-0.282;DP=486;FS=2.155;HRun=13;HaplotypeScore=57.8323;InbreedingCoeff=0.4927;MQ=75.60;MQ0=2;MQRankSum=2.125;QD=6.14;ReadPosRankSum=-1.148;VQSLOD=1.8734;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:26:23.75:0,24,292	0/0:5,0:5:8.92:0,9,62	1/1:23,0:14:5.93:41,6,0	0/1:20,0:12:6.32:16,0,6	0/1:20,0:21:17.67:18,0,219	0/0:9,0:9:20.82:0,21,144	0/0:11,0:11:18.25:0,18,140	0/0:19,0:19:37.66:0,38,247	0/0:14,1:16:1.06:0,1,142	0/0:26,0:28:21.50:0,21,357	0/0:24,1:25:13.53:0,14,231	0/0:6,0:11:8.12:0,8,23	0/0:4,0:13:10.17:0,10,29	0/0:2,0:7:7.38:0,7,22	0/0:19,0:19:41.58:0,42,288	0/0:14,0:14:28.84:0,29,203	0/0:21,0:23:45.61:0,46,297	1/1:3,26:31:71.76:641,72,0	0/0:13,1:14:23.66:0,24,162	0/0:18,1:19:7.51:0,8,188	0/0:15,0:17:36.75:0,37,236	0/0:11,0:11:26.72:0,27,184	0/0:16,0:16:32.29:0,32,216	0/0:12,0:12:17.75:0,18,123	0/0:17,0:18:32.54:0,33,223	0/0:18,0:18:32.63:0,33,223	0/0:22,0:22:53.51:0,54,367	0/0:14,0:15:34.72:0,35,232
chr10	85816239	.	C	CT	16966.12	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-16.320;DP=664;FS=7.749;HRun=0;HaplotypeScore=57.9107;InbreedingCoeff=0.9947;MQ=89.15;MQ0=0;MQRankSum=-2.914;QD=39.27;ReadPosRankSum=2.888;VQSLOD=5.0659;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,47:47:99:1782,114,0	1/1:0,6:6:12.04:188,12,0	0/0:25,0:25:72.22:0,72,958	0/0:27,0:27:60.52:0,61,808	0/0:17,0:17:51.13:0,51,681	0/0:23,0:23:69.17:0,69,908	1/1:0,21:21:36.12:563,36,0	1/1:0,36:36:99:1447,102,0	0/0:25,0:25:69.22:0,69,944	1/1:0,27:27:81.28:1262,81,0	1/1:0,10:10:27.09:422,27,0	1/1:0,23:23:60.20:938,60,0	1/1:1,18:19:39.13:610,39,0	1/1:0,29:29:75.26:1173,75,0	0/0:24,0:24:66.18:0,66,899	0/0:10,0:10:29.96:0,30,351	1/1:0,39:39:99:1689,108,0	1/1:0,18:18:48.16:751,48,0	1/1:1,28:29:84.21:1205,84,0	1/1:0,12:12:33.01:461,33,0	1/1:1,61:62:99:2159,138,0	0/0:24,0:24:71.93:0,72,908	0/0:17,0:17:48.09:0,48,646	0/0:27,0:27:78.17:0,78,1043	0/0:13,0:13:39.10:0,39,523	1/1:0,28:28:81.20:1194,81,0	1/1:0,18:18:51.17:797,51,0	1/1:0,8:8:21.07:326,21,0
chr10	85816789	.	C	CT	1975.75	PASS	AB=0.857;AC=9;AF=0.161;AN=56;BaseQRankSum=-6.365;DP=783;FS=0.906;HRun=10;HaplotypeScore=92.5428;InbreedingCoeff=0.6493;MQ=70.32;MQ0=1;MQRankSum=0.334;QD=13.53;ReadPosRankSum=0.421;VQSLOD=3.7723;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:57:99:0,115,1071	0/1:2,6:8:15.62:55,0,16	0/1:23,0:21:1.42:1,0,155	0/1:11,0:12:12.44:12,0,26	0/0:26,0:26:65.84:0,66,534	0/0:29,1:31:44.91:0,45,559	0/0:26,0:26:62.86:0,63,511	0/0:33,0:34:67.68:0,68,541	0/0:38,0:38:99:0,107,868	1/1:8,23:31:47.50:690,47,0	1/1:5,16:21:14.46:347,14,0	0/0:3,0:25:42.77:0,43,124	0/0:3,0:19:30.55:0,31,88	0/0:1,0:22:38.68:0,39,112	0/0:26,0:26:68.87:0,69,557	0/0:19,0:19:47.87:0,48,382	1/1:9,38:50:37.75:1022,38,0	0/0:25,0:25:65.85:0,66,533	0/0:24,0:24:49.94:0,50,400	0/0:20,0:21:52.92:0,53,417	0/0:41,0:42:74.36:0,74,681	0/0:31,0:31:86.87:0,87,710	0/0:18,0:18:37.98:0,38,295	0/0:34,1:35:63.80:0,64,716	0/0:17,0:17:38.89:0,39,315	0/0:46,0:48:99:0,115,916	0/0:31,1:32:47.94:0,48,586	0/0:18,0:18:47.94:0,48,394
chr10	85817150	.	T	TGA	1194.02	PASS	AB=0.944;AC=27;AF=0.540;AN=50;BaseQRankSum=4.812;DP=483;FS=3.518;HRun=0;HaplotypeScore=108.8767;InbreedingCoeff=0.5640;MQ=59.65;MQ0=3;MQRankSum=-3.331;QD=4.15;ReadPosRankSum=-2.189;VQSLOD=2.4718;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:16.46:78,16,0	1/1:6,4:10:12.04:180,12,0	./.	./.	0/0:18,0:18:11.94:0,12,133	0/0:9,0:9:15.04:0,15,165	1/1:32,0:32:16.78:149,17,0	./.	0/0:12,0:14:26.73:0,27,259	0/0:16,0:17:11.86:0,12,112	1/1:17,2:19:6.02:90,6,0	0/0:4,0:4:0:0,0,0	1/1:12,0:11:3.01:44,3,0	1/1:19,0:18:5.87:35,6,0	0/0:10,0:11:20.84:0,21,199	0/0:16,0:16:24.03:0,24,247	0/1:19,5:25:15.89:224,0,16	1/1:8,0:12:11.97:99,12,0	1/1:18,0:18:18.76:154,19,0	1/1:17,0:17:0.90:39,1,0	1/1:12,0:12:2.99:24,3,0	0/1:24,0:24:12.84:13,0,267	0/0:12,0:14:17.71:0,18,160	0/0:18,0:19:12.97:0,13,290	0/0:11,0:13:20.72:0,21,193	0/1:27,0:25:16.62:82,0,17	1/1:15,0:22:20.26:141,20,0	1/1:12,0:11:4.67:22,5,0
chr10	85817222	.	G	GTT	2310.60	PASS	AB=0.910;AC=23;AF=0.411;AN=56;BaseQRankSum=0.506;DP=489;FS=0.000;HRun=12;HaplotypeScore=95.3247;InbreedingCoeff=0.5709;MQ=68.05;MQ0=1;MQRankSum=-1.795;QD=8.62;ReadPosRankSum=-3.784;VQSLOD=0.7384;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:30:46.66:577,47,0	1/1:3,6:8:7.56:124,8,0	0/0:9,0:10:9.08:0,9,55	0/1:19,0:14:5.92:6,0,63	0/1:11,0:12:6.91:7,0,147	0/0:20,0:21:52.37:0,52,441	1/1:1,17:21:35.09:424,35,0	1/1:26,0:26:4.27:85,4,0	0/0:12,0:13:33.42:0,33,251	0/1:9,11:20:0.49:256,0,0	1/1:3,14:19:43.74:425,44,0	0/0:12,0:12:18.06:0,18,152	0/0:9,0:10:0.78:0,1,150	0/0:11,0:14:12.68:0,13,125	0/0:11,0:11:23.97:0,24,222	0/0:11,0:13:19.67:0,20,219	1/1:4,14:19:24.85:306,25,0	0/0:16,0:17:44.65:0,45,394	1/1:23,0:22:9.17:68,9,0	0/1:19,0:17:2.64:46,0,3	1/1:8,0:8:5.65:28,6,0	0/0:19,0:20:41.27:0,41,371	0/0:24,0:24:6.46:0,6,356	0/0:29,0:32:59.06:0,59,566	0/0:19,0:20:27.57:0,28,276	1/1:20,1:21:4.89:128,5,0	0/1:19,0:19:16.08:24,0,16	0/0:4,0:4:4.48:0,4,17
chr10	85817232	.	TTTC	T	2748.88	PASS	AB=0.963;AC=15;AF=0.268;AN=56;BaseQRankSum=1.163;DP=530;FS=3.967;HRun=0;HaplotypeScore=99.5209;InbreedingCoeff=0.6695;MQ=58.90;MQ0=5;MQRankSum=-4.548;QD=16.17;ReadPosRankSum=-7.567;VQSLOD=1.6971;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:57:0,57,642	0/1:8,0:7:18.52:19,0,116	0/0:7,0:5:1.32:0,1,60	0/0:20,0:11:6.83:0,7,119	0/0:18,0:18:26.39:0,26,603	0/0:22,0:22:32.53:0,33,815	0/0:22,0:22:39.02:0,39,457	1/1:3,18:21:53.92:497,54,0	0/0:15,0:15:42.79:0,43,506	0/1:20,0:18:18.18:18,0,332	0/0:22,0:22:57.08:0,57,621	0/0:12,0:12:18.25:0,18,351	0/0:11,0:11:4.67:0,5,362	0/0:17,0:17:34.09:0,34,411	0/0:14,0:13:39.07:0,39,584	0/0:14,0:14:35.87:0,36,562	0/0:21,1:22:16.17:0,16,249	0/0:21,0:21:56.86:0,57,922	1/1:25,3:26:63.66:619,64,0	1/1:18,3:19:35.54:414,36,0	1/1:9,0:9:16.45:102,16,0	0/0:19,0:19:47.57:0,48,753	0/0:23,0:23:34.94:0,35,838	0/0:32,0:32:84.73:0,85,1352	0/0:18,0:18:37.96:0,38,625	0/1:21,3:23:8.79:441,0,9	1/1:22,1:23:61.86:550,62,0	1/1:14,2:15:31.37:279,31,0
chr10	85817233	.	TTC	T	2643.03	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=2.538;DP=531;FS=9.719;HRun=0;HaplotypeScore=90.9265;InbreedingCoeff=0.6458;MQ=57.82;MQ0=5;MQRankSum=-4.020;QD=13.22;ReadPosRankSum=-7.557;VQSLOD=0.2735;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:55.61:0,56,416	0/1:8,0:7:20.58:21,0,61	0/1:7,0:5:6.60:7,0,36	0/1:20,0:10:15.51:16,0,62	0/0:17,0:17:26.25:0,26,472	0/0:22,0:22:4.66:0,5,568	0/0:20,0:20:38.60:0,39,300	1/1:19,1:20:54.28:439,54,0	0/0:15,0:15:21.12:0,21,370	0/0:19,0:17:7.79:0,8,264	0/0:23,0:23:58.23:0,58,432	0/0:12,0:12:10.16:0,10,255	0/0:11,0:11:3.49:0,3,272	0/0:18,0:18:29.53:0,30,325	0/0:14,0:13:39.06:0,39,486	0/0:14,0:14:34.33:0,34,424	0/1:22,0:22:4.55:5,0,151	0/0:22,0:22:59.44:0,59,745	1/1:28,0:26:68.06:548,68,0	1/1:22,0:20:54.42:416,54,0	1/1:9,0:9:17.07:105,17,0	0/0:19,0:19:46.99:0,47,587	0/0:23,0:23:29.44:0,29,652	0/0:33,0:33:70.77:0,71,1028	0/0:18,0:18:25.95:0,26,473	1/1:23,1:23:19.73:461,20,0	1/1:20,3:23:62.47:527,62,0	1/1:17,0:16:35.88:297,36,0
chr10	85817841	.	T	TA	3754.45	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-2.607;DP=539;FS=18.391;HRun=9;HaplotypeScore=68.8849;InbreedingCoeff=0.9210;MQ=71.08;MQ0=0;MQRankSum=-0.895;QD=24.54;ReadPosRankSum=-2.474;VQSLOD=1.9118;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:39:99:0,101,845	0/0:7,0:7:21:0,21,182	0/0:18,0:15:33.69:0,34,254	0/1:9,0:8:6.33:6,0,20	0/0:18,0:18:46.54:0,47,394	0/0:21,0:21:56.99:0,57,495	0/0:17,0:17:44.99:0,45,391	1/1:1,18:19:48.10:519,48,0	0/0:26,0:26:74.98:0,75,651	0/0:32,0:32:80.97:0,81,701	0/0:13,0:13:35.97:0,36,307	0/0:17,0:17:50.99:0,51,443	0/0:20,0:20:50.98:0,51,443	0/0:21,0:21:50.96:0,51,439	0/0:22,0:22:56.99:0,57,494	0/0:5,0:5:15:0,15,130	0/0:15,0:15:32.96:0,33,281	0/0:22,0:22:59.99:0,60,521	1/1:5,9:15:26.91:280,27,0	1/1:5,14:20:44.92:463,45,0	1/1:6,24:30:52.09:788,52,0	0/0:22,1:23:35.79:0,36,536	0/0:17,0:17:47.99:0,48,417	0/0:26,0:26:42.69:0,43,593	0/0:7,0:7:18:0,18,156	1/1:4,29:33:87.18:934,87,0	1/1:1,13:14:33.56:366,34,0	1/1:0,13:13:36.10:398,36,0
chr10	85820228	.	GGATA	G	637.18	PASS	AB=1.000;AC=13;AF=0.283;AN=46;BaseQRankSum=1.878;DP=319;FS=1.204;HRun=0;HaplotypeScore=81.0492;InbreedingCoeff=0.5628;MQ=53.07;MQ0=6;MQRankSum=0.302;QD=7.59;ReadPosRankSum=0.960;VQSLOD=2.3072;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:9.93:0,10,168	0/0:4,0:4:12.04:0,12,258	./.	./.	0/0:11,0:11:9.01:0,9,163	1/1:6,0:9:9.01:84,9,0	0/0:12,0:9:6.01:0,6,68	0/0:27,0:21:2.49:0,2,6	0/0:15,0:15:27.09:0,27,587	0/0:9,0:16:27.01:0,27,360	0/0:18,0:18:21.07:0,21,451	./.	1/1:7,0:7:3:28,3,0	./.	1/1:5,5:10:12.04:183,12,0	0/0:10,0:11:9.02:0,9,130	0/0:15,0:14:17.92:0,18,285	0/1:12,0:12:0.69:1,0,69	./.	0/1:13,0:12:9.49:9,0,55	0/1:14,0:13:25.17:25,0,37	0/0:14,0:14:21.04:0,21,349	1/1:4,5:9:12.04:183,12,0	1/1:7,3:10:20.74:277,21,0	0/0:10,0:9:18.05:0,18,340	0/0:12,0:12:17.28:0,17,199	0/0:20,0:20:15.03:0,15,161	0/0:3,0:3:8.36:0,8,57
chr10	85820280	.	A	AT	417.82	PASS	AB=0.955;AC=7;AF=0.125;AN=56;BaseQRankSum=-1.414;DP=410;FS=1.280;HRun=1;HaplotypeScore=113.3758;InbreedingCoeff=0.7706;MQ=55.18;MQ0=10;MQRankSum=1.041;QD=10.45;ReadPosRankSum=-0.362;VQSLOD=1.3707;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:49.05:0,49,663	0/0:6,0:6:18.06:0,18,252	0/0:15,0:7:20.93:0,21,251	0/0:9,0:4:9.03:0,9,124	0/0:7,0:7:21.05:0,21,275	0/0:11,0:11:32.85:0,33,385	0/0:20,0:17:42.03:0,42,554	0/0:30,0:25:63.36:0,63,782	0/0:14,0:14:42.14:0,42,585	0/0:24,0:24:72.12:0,72,893	0/0:15,0:15:45.15:0,45,624	1/1:0,5:5:12.04:191,12,0	1/1:1,4:5:9.01:118,9,0	1/1:0,9:9:12.04:191,12,0	0/0:11,0:11:29.42:0,29,308	0/0:12,0:10:21.05:0,21,262	0/0:13,0:12:30.01:0,30,391	0/0:14,0:14:39.13:0,39,541	0/0:8,0:7:21.07:0,21,292	0/0:18,0:17:29.65:0,30,401	0/0:15,0:15:38.95:0,39,518	0/0:15,0:15:42.13:0,42,568	0/0:10,0:10:26.40:0,26,249	0/1:20,1:21:53.52:54,0,386	0/0:15,0:15:45.14:0,45,611	0/0:25,0:24:69:0,69,874	0/0:26,0:26:48.16:0,48,667	0/0:12,0:12:32.91:0,33,411
chr10	85820300	.	TGGATGGATG	T	1266.08	PASS	AB=0.836;AC=7;AF=0.125;AN=56;BaseQRankSum=4.262;DP=439;FS=0.000;HRun=0;HaplotypeScore=172.1721;InbreedingCoeff=-0.1400;MQ=53.93;MQ0=11;MQRankSum=-3.852;QD=10.64;ReadPosRankSum=-0.249;VQSLOD=2.2222;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:30:20.12:0,20,1139	0/1:3,0:4:74.49:74,0,177	0/0:17,0:7:12.97:0,13,501	0/0:9,0:3:9.03:0,9,229	0/0:6,0:6:18.06:0,18,732	0/0:13,0:13:39.09:0,39,1576	0/0:18,0:16:45.15:0,45,796	0/1:26,0:25:3.19:3,0,2116	0/0:21,0:21:63.22:0,63,2308	0/0:22,0:22:54.56:0,55,1515	0/0:13,0:13:39.13:0,39,944	0/0:6,0:6:14.01:0,14,350	0/0:8,0:8:24.08:0,24,602	0/0:9,0:9:25.90:0,26,629	0/0:15,0:14:39.13:0,39,1219	0/0:14,0:13:30.10:0,30,1241	0/0:11,0:11:24.08:0,24,641	0/1:20,0:21:14.55:15,0,1460	0/1:9,2:10:99:154,0,642	0/1:14,7:20:99:239,0,891	0/0:19,0:18:36.12:0,36,1280	0/0:15,0:15:45.15:0,45,1612	0/0:12,0:12:30.09:0,30,1090	0/0:19,0:19:47:0,47,1774	0/0:12,0:12:33.11:0,33,1221	0/0:28,0:25:75.26:0,75,2610	0/1:12,7:22:99:768,0,1428	0/1:10,1:11:99:138,0,919
chr10	85820309	.	G	GGATA	3220.76	PASS	AB=0.925;AC=24;AF=0.480;AN=50;BaseQRankSum=-4.543;DP=447;FS=19.333;HRun=0;HaplotypeScore=124.9209;InbreedingCoeff=0.2527;MQ=52.65;MQ0=14;MQRankSum=0.617;QD=10.81;ReadPosRankSum=-2.356;VQSLOD=1.2043;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:8.93:9,0,95	1/1:4,0:4:3:25,3,0	./.	./.	0/0:6,0:6:9:0,9,95	0/0:12,0:12:27.01:0,27,356	./.	1/1:36,0:29:0.89:2,1,0	0/0:19,0:19:42.04:0,42,476	0/1:23,0:23:57.04:57,0,133	0/1:12,0:12:12.99:13,0,74	0/0:6,0:8:9.89:0,10,83	0/0:3,0:9:21.02:0,21,192	0/0:6,0:10:15.01:0,15,138	1/1:15,1:15:27.01:357,27,0	1/1:5,11:15:15.05:350,15,0	1/1:12,0:13:18.01:271,18,0	1/1:16,0:23:32.85:560,33,0	0/1:6,3:7:12.07:219,0,12	1/1:19,1:18:0.44:216,0,0	0/1:18,2:19:30.98:182,0,31	0/0:15,0:15:15.05:0,15,224	0/0:12,0:12:15.02:0,15,188	0/0:19,0:19:23.99:0,24,298	0/1:10,1:12:54.97:55,0,130	1/1:20,7:23:27.06:580,27,0	0/1:21,6:26:99:479,0,136	0/1:13,0:12:17.30:18,0,17
chr10	85820373	.	T	TGATAGATA	5955.67	PASS	AB=0.817;AC=26;AF=0.464;AN=56;BaseQRankSum=7.742;DP=467;FS=13.760;HRun=0;HaplotypeScore=158.7834;InbreedingCoeff=0.7636;MQ=59.16;MQ0=4;MQRankSum=-7.420;QD=26.12;ReadPosRankSum=-4.182;VQSLOD=2.9799;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:19:14.57:291,0,15	0/0:4,0:4:12.04:0,12,275	0/0:19,0:9:2.97:0,3,20	0/1:11,0:6:0:0,0,0	0/0:11,0:11:33.10:0,33,782	0/0:17,0:18:36.59:0,37,883	1/1:5,0:13:22.80:252,23,0	1/1:35,0:34:5.96:45,6,0	0/0:25,0:25:45.12:0,45,1032	0/0:17,0:17:39.13:0,39,908	0/0:16,0:16:36.11:0,36,857	1/1:4,10:17:24.07:986,24,0	1/1:9,1:10:9.03:322,9,0	1/1:5,4:9:18.06:740,18,0	0/0:21,0:20:42.09:0,42,800	0/0:26,0:26:54.17:0,54,1309	0/0:25,0:24:63.19:0,63,1444	1/1:19,0:18:5.93:47,6,0	1/1:9,0:8:6.01:95,6,0	1/1:10,0:11:3.01:48,3,0	1/1:8,0:8:0.84:2,1,0	0/0:16,0:16:33.11:0,33,825	0/0:9,0:9:15.05:0,15,369	0/0:20,0:21:42.14:0,42,995	0/0:11,0:11:18.06:0,18,421	1/1:29,0:30:72.25:2169,72,0	1/1:23,0:26:33.08:833,33,0	1/1:6,0:7:9.01:127,9,0
chr10	85820405	.	ATGAAAAATGAAGGGATGGATG	A	3388.96	PASS	AB=0.894;AC=8;AF=0.143;AN=56;BaseQRankSum=9.055;DP=477;FS=0.642;HRun=0;HaplotypeScore=261.4852;InbreedingCoeff=-0.1716;MQ=53.90;MQ0=2;MQRankSum=-4.277;QD=22.30;ReadPosRankSum=-0.553;VQSLOD=2.0177;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:77.03:77,0,4853	0/0:9,0:9:27.09:0,27,2215	0/0:14,0:9:21.50:0,21,582	0/0:5,0:5:7.58:0,8,424	0/0:19,0:19:57.20:0,57,4575	0/0:19,0:19:54.66:0,55,3850	0/0:22,0:20:28.19:0,28,2159	0/0:15,0:15:25.17:0,25,1480	0/0:22,0:22:66.19:0,66,4742	0/0:27,0:27:81.28:0,81,6277	0/0:20,0:20:60.19:0,60,4744	0/1:17,0:17:99:104,0,1348	0/1:14,0:14:78.05:78,0,297	0/1:11,0:12:64.19:64,0,1718	0/0:20,0:20:60.19:0,60,4312	0/0:22,0:22:66.23:0,66,5020	0/0:27,0:26:78.27:0,78,5654	0/1:8,0:12:79.52:80,0,1132	0/0:9,0:9:27.09:0,27,1507	0/0:9,0:9:27.09:0,27,1988	0/0:7,0:7:14.28:0,14,629	0/0:16,0:16:48.16:0,48,3566	0/0:11,0:11:33.11:0,33,2708	0/0:20,0:20:53.99:0,54,3829	0/0:12,0:12:36.12:0,36,2819	0/1:18,15:33:99:2186,0,3663	0/1:17,4:20:99:773,0,3175	0/1:10,0:10:26.44:26,0,2092
chr10	85820426	.	GGATA	G	354.61	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.373;DP=560;FS=9.012;HRun=0;HaplotypeScore=143.2841;InbreedingCoeff=0.9704;MQ=55.80;MQ0=1;MQRankSum=-4.900;QD=19.70;ReadPosRankSum=1.487;VQSLOD=3.0113;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:84.82:0,85,2299	0/0:10,0:10:30.10:0,30,756	0/0:16,0:14:35.96:0,36,563	0/0:9,0:9:24.04:0,24,370	0/0:21,0:21:60.15:0,60,1318	0/0:19,0:19:39.52:0,40,1231	0/0:30,0:28:51.15:0,51,1192	0/0:32,0:32:87.20:0,87,1685	0/0:29,0:29:72.22:0,72,1755	0/0:28,0:28:78.20:0,78,1855	0/0:20,0:20:48.15:0,48,1172	0/0:19,0:19:30.02:0,30,635	0/0:17,0:17:14.96:0,15,224	0/0:14,0:14:39.12:0,39,958	0/0:21,0:21:63.16:0,63,1435	0/0:20,0:20:45.14:0,45,1065	0/0:25,0:24:60.10:0,60,1388	1/1:11,7:16:29.42:449,29,0	0/0:12,0:12:27.09:0,27,680	0/0:12,0:12:36.11:0,36,856	0/0:10,0:10:18.06:0,18,470	0/0:18,0:18:54.14:0,54,1217	0/0:12,0:12:30.10:0,30,780	0/0:19,0:19:45.12:0,45,1117	0/0:13,0:13:33.09:0,33,758	0/0:39,0:39:33.90:0,34,1685	0/0:23,0:22:32.36:0,32,1444	0/0:18,0:18:51.05:0,51,1051
chr10	85820454	.	GGGAT	G	497.36	PASS	AB=0.943;AC=8;AF=0.143;AN=56;BaseQRankSum=6.093;DP=647;FS=2.724;HRun=0;HaplotypeScore=161.6309;InbreedingCoeff=-0.1598;MQ=54.62;MQ0=5;MQRankSum=-0.611;QD=2.59;ReadPosRankSum=-1.448;VQSLOD=2.6685;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:41:88.18:88,0,369	0/1:9,0:9:0.87:1,0,128	0/0:26,0:10:7.38:0,7,82	0/0:12,0:7:11.99:0,12,120	0/0:24,0:24:35.21:0,35,844	0/0:21,0:21:43.77:0,44,669	0/0:28,0:27:35.80:0,36,401	0/0:52,0:50:99:0,111,993	0/0:28,0:28:75.10:0,75,1243	0/1:36,0:35:8.09:8,0,281	0/0:22,0:21:20.06:0,20,215	0/1:19,0:19:76.81:77,0,363	0/1:3,17:20:19.71:283,0,20	0/1:17,0:17:68.05:68,0,240	0/0:26,0:26:72.10:0,72,1108	0/0:17,0:17:48.07:0,48,916	0/1:27,0:27:65.50:66,0,169	0/1:22,0:21:35.09:35,0,672	0/0:18,0:15:27:0,27,273	0/0:18,0:18:32.99:0,33,396	0/0:10,0:10:17.82:0,18,140	0/0:16,0:16:22.13:0,22,497	0/0:15,0:15:7.09:0,7,463	0/0:21,0:21:48.41:0,48,883	0/0:16,0:16:20.40:0,20,703	0/0:33,0:32:62.57:0,63,633	0/0:32,0:31:62.69:0,63,654	0/0:20,0:20:47.90:0,48,530
chr10	85820471	.	GGATAGATA	G	1543.70	PASS	AB=0.892;AC=6;AF=0.115;AN=52;BaseQRankSum=1.773;DP=633;FS=10.479;HRun=0;HaplotypeScore=188.6073;InbreedingCoeff=0.4973;MQ=54.75;MQ0=9;MQRankSum=1.342;QD=16.42;ReadPosRankSum=-2.228;VQSLOD=1.7434;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:41:35.23:0,35,328	0/1:9,0:9:44.88:45,0,64	./.	./.	0/0:23,0:23:42.13:0,42,1295	0/0:21,0:21:39.10:0,39,1144	0/1:21,0:28:32.91:33,0,92	0/0:50,0:45:18.06:0,18,242	0/0:32,0:32:69.24:0,69,1917	1/1:8,28:35:78.24:1516,78,0	1/1:11,9:19:2.56:74,3,0	0/0:17,0:17:30.10:0,30,1113	0/0:21,0:21:30.10:0,30,473	0/0:16,0:16:21.07:0,21,756	0/0:26,0:26:48.13:0,48,1498	0/0:21,0:21:48.16:0,48,1619	0/0:14,0:27:16.96:0,17,194	0/0:18,0:19:33.09:0,33,914	0/0:12,0:10:9.03:0,9,237	0/0:15,0:18:24.05:0,24,567	0/0:13,0:13:8.94:0,9,263	0/0:21,0:22:42.11:0,42,959	0/0:15,0:15:21.05:0,21,566	0/0:20,0:20:40.02:0,40,1403	0/0:14,0:14:30.09:0,30,1062	0/0:30,0:30:45.62:0,46,1117	0/0:27,0:29:36.20:0,36,900	0/0:17,0:20:33.11:0,33,889
chr10	85820939	.	GT	G	9019.55	PASS	AB=0.883;AC=52;AF=0.963;AN=54;BaseQRankSum=-8.770;DP=370;FS=39.322;HRun=1;HaplotypeScore=56.7977;InbreedingCoeff=-0.0565;MQ=80.95;MQ0=7;MQRankSum=-1.763;QD=24.38;ReadPosRankSum=2.333;VQSLOD=2.7049;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:40.69:549,41,0	1/1:0,6:6:18.06:251,18,0	0/1:31,6:23:99:144,0,517	0/1:52,6:26:99:142,0,363	1/1:0,13:13:30.10:419,30,0	1/1:2,4:5:14.08:173,14,0	1/1:2,14:18:38.49:508,38,0	1/1:3,12:14:39.05:517,39,0	1/1:0,4:4:12.04:168,12,0	1/1:1,14:15:42.14:588,42,0	1/1:0,3:3:6.02:84,6,0	1/1:1,9:10:22.32:291,22,0	1/1:0,5:6:13.86:173,14,0	1/1:1,10:11:7.07:349,7,0	1/1:1,5:5:11.74:166,12,0	1/1:0,5:5:12.04:165,12,0	1/1:0,15:14:39.13:544,39,0	1/1:0,6:6:12.04:167,12,0	1/1:1,10:10:29.83:389,30,0	1/1:1,7:7:12.04:168,12,0	1/1:2,49:44:99:1385,102,0	1/1:0,8:8:18.06:252,18,0	1/1:0,6:6:18.06:252,18,0	1/1:0,14:14:27.09:377,27,0	1/1:0,4:4:12.04:168,12,0	1/1:0,11:11:31.35:423,31,0	1/1:0,6:6:15.05:209,15,0	./.
chr10	85823553	.	C	CCCGACCATCACT	17574.94	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=4.946;DP=602;FS=0.390;HRun=0;HaplotypeScore=220.7728;InbreedingCoeff=0.9788;MQ=81.57;MQ0=0;MQRankSum=-15.740;QD=84.49;ReadPosRankSum=-2.496;VQSLOD=3.8990;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,6:26:45.02:1954,45,0	0/0:10,0:10:30.10:0,30,1107	0/0:19,0:19:30.22:0,30,1447	0/0:23,0:24:58.13:0,58,1500	0/0:12,0:12:24.04:0,24,746	0/0:15,0:15:45.13:0,45,1510	1/1:17,8:28:57.11:2639,57,0	1/1:14,4:20:54.14:2602,54,0	0/0:19,0:19:51.18:0,51,1745	0/0:28,0:28:78.24:0,78,2439	0/0:9,0:9:21.07:0,21,698	0/0:37,0:37:99:0,111,3697	0/0:23,0:23:66.21:0,66,2107	0/0:27,0:27:69.06:0,69,2400	0/0:21,0:21:60.21:0,60,2042	0/0:17,0:17:45.13:0,45,1518	0/0:40,0:40:99:0,114,3888	1/1:13,12:28:66.16:3527,66,0	1/1:10,4:15:30.05:1310,30,0	1/1:4,1:5:12.04:496,12,0	1/1:28,16:47:7.41:459,7,0	0/0:12,0:12:30.06:0,30,734	0/0:12,0:12:24.07:0,24,684	0/0:53,0:53:99:0,150,5166	0/0:16,0:16:42.13:0,42,1345	1/1:15,5:21:58.44:2953,58,0	1/1:3,7:11:24.08:1226,24,0	1/1:6,0:5:14.41:410,14,0
chr10	85824098	.	CA	C	1488.20	PASS	AB=0.809;AC=20;AF=0.357;AN=56;BaseQRankSum=-0.088;DP=283;FS=7.519;HRun=12;HaplotypeScore=41.5483;InbreedingCoeff=0.4862;MQ=58.62;MQ0=7;MQRankSum=0.438;QD=8.60;ReadPosRankSum=0.099;VQSLOD=1.4306;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:23:49.84:377,50,0	0/0:1,0:5:11.35:0,11,56	0/1:21,0:8:7.07:7,0,51	0/1:25,2:12:39.66:45,0,40	0/0:7,0:7:12.50:0,12,123	0/0:12,1:13:12.03:0,12,259	1/1:0,13:13:26.90:209,27,0	1/1:9,12:22:35.83:276,36,0	0/0:10,0:9:19.85:0,20,188	0/0:2,0:5:14.33:0,14,77	0/0:2,0:10:14.36:0,14,81	0/0:6,0:5:9.02:0,9,91	0/0:8,0:7:18.90:0,19,174	0/0:6,0:6:12.03:0,12,122	0/0:0,0:5:5.68:0,6,28	0/0:1,0:4:8.69:0,9,59	0/1:7,1:10:0.13:0,0,91	0/1:7,1:10:34.92:40,0,35	1/1:8,7:10:23.87:186,24,0	1/1:0,1:1:2.99:23,3,0	1/1:0,8:8:23.91:186,24,0	0/0:3,0:3:9.02:0,9,91	0/0:9,0:9:18:0,18,171	0/0:11,0:11:27.01:0,27,257	0/0:7,0:7:15.01:0,15,142	0/1:2,8:11:9.91:176,0,10	0/1:2,3:6:13.46:82,0,13	1/1:1,4:5:8.96:70,9,0
chr10	85824104	.	A	AC	82.80	PASS	AB=0.943;AC=9;AF=0.161;AN=56;BaseQRankSum=3.720;DP=291;FS=3.862;HRun=0;HaplotypeScore=50.0947;InbreedingCoeff=0.3010;MQ=56.62;MQ0=8;MQRankSum=-1.349;QD=1.08;ReadPosRankSum=2.551;VQSLOD=0.9621;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:59.49:0,59,420	1/1:4,0:4:7.71:27,8,0	0/0:22,0:7:9.84:0,10,82	0/1:28,0:12:24.47:24,0,132	0/0:7,0:7:17.98:0,18,207	0/0:13,0:13:36.86:0,37,415	0/0:13,0:13:26.80:0,27,193	0/0:19,0:19:56.74:0,57,441	0/0:10,0:9:21.04:0,21,269	0/1:6,0:5:10.15:14,0,10	0/1:9,0:9:7.11:7,0,19	0/0:6,0:5:14.96:0,15,155	0/0:9,0:8:23.71:0,24,279	0/0:6,0:6:12.04:0,12,166	1/1:5,0:5:4.74:16,5,0	0/0:4,0:4:1.55:0,2,39	0/1:15,0:15:14.29:14,0,127	0/1:6,4:10:0.77:114,0,1	0/0:14,0:10:29.80:0,30,214	0/0:1,0:1:2.98:0,3,21	0/0:8,0:8:23.86:0,24,172	0/0:4,0:4:12.03:0,12,150	0/0:10,0:10:29.86:0,30,311	0/0:12,0:12:30.04:0,30,366	0/0:8,0:8:21.01:0,21,228	0/0:13,0:13:34.98:0,35,260	0/0:6,0:6:17.87:0,18,146	0/0:5,0:5:8.94:0,9,65
chr10	85824106	.	A	AAAC	238.44	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=4.242;DP=289;FS=1.189;HRun=0;HaplotypeScore=60.0080;InbreedingCoeff=0.4564;MQ=54.84;MQ0=7;MQRankSum=-1.689;QD=6.62;ReadPosRankSum=-0.657;VQSLOD=2.2549;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:52.85:0,53,447	0/0:4,0:4:11.14:0,11,51	0/0:22,0:7:11.54:0,12,74	0/1:26,0:12:2.34:2,0,94	0/0:7,0:7:15.89:0,16,206	0/0:12,0:13:38.02:0,38,437	0/0:14,0:14:30.02:0,30,275	0/0:18,0:18:44.53:0,45,398	0/0:10,0:9:19.88:0,20,274	0/0:6,0:5:14.05:0,14,70	0/0:9,0:9:14.13:0,14,75	0/0:6,0:5:14.96:0,15,178	0/0:9,0:8:24:0,24,300	0/0:6,0:6:11.87:0,12,180	0/0:5,0:5:5.54:0,6,25	0/0:4,0:4:8.61:0,9,72	0/0:15,0:15:39.64:0,40,261	1/1:5,4:10:11.61:323,12,0	0/0:14,0:10:28.93:0,29,227	0/0:1,0:1:3:0,3,28	0/0:8,0:8:24.03:0,24,225	0/0:4,0:4:12.03:0,12,161	0/0:11,0:11:26.96:0,27,311	0/0:12,0:12:30.04:0,30,397	0/0:8,0:8:18.51:0,19,222	0/0:13,0:13:37.72:0,38,291	0/0:6,0:6:16.32:0,16,140	0/0:4,0:4:9.01:0,9,83
chr10	85824293	.	T	TGAAGAAGAAGAAGAA	9124	PASS	AC=32;AF=0.615;AN=52;BaseQRankSum=4.613;DP=250;FS=0.913;HRun=0;HaplotypeScore=102.3455;InbreedingCoeff=0.8413;MQ=47.67;MQ0=8;MQRankSum=-7.844;QD=53.05;ReadPosRankSum=-2.827;VQSLOD=4.1336;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:15.05:521,15,0	1/1:3,1:6:9.91:639,10,0	./.	./.	0/0:12,0:12:24.08:0,24,819	0/0:10,0:12:27.09:0,27,948	1/1:7,0:7:3.01:81,3,0	1/1:29,0:29:33.11:545,33,0	0/0:4,0:4:12.04:0,12,473	1/1:20,0:17:39.13:1632,39,0	1/1:6,0:6:12.04:283,12,0	0/0:4,0:4:9.03:0,9,329	0/0:3,0:3:9.03:0,9,362	0/0:2,0:2:3.01:0,3,123	1/1:1,0:7:14.51:132,15,0	1/1:1,0:3:6.02:151,6,0	1/1:17,0:17:21.07:699,21,0	1/1:15,0:15:15.05:241,15,0	1/1:13,0:13:15.05:843,15,0	1/1:3,0:3:6.02:324,6,0	1/1:5,0:5:12.02:262,12,0	0/0:5,0:5:15.05:0,15,515	0/0:5,0:6:15.05:0,15,520	0/0:5,0:5:9.01:0,9,228	0/0:11,0:11:21.07:0,21,852	1/1:13,0:13:36.12:1595,36,0	1/1:5,4:11:12.04:673,12,0	1/1:8,0:6:15.05:505,15,0
chr10	85824341	.	AAC	A	557.09	PASS	AB=0.821;AC=7;AF=0.125;AN=56;BaseQRankSum=8.512;DP=384;FS=0.000;HRun=0;HaplotypeScore=62.2552;InbreedingCoeff=-0.1556;MQ=53.21;MQ0=9;MQRankSum=-5.038;QD=4.89;ReadPosRankSum=0.162;VQSLOD=2.3118;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,1:23:11.82:0,12,912	0/0:8,0:8:15.02:0,15,254	0/0:26,0:4:8.25:0,8,159	0/0:12,0:7:12.31:0,12,187	0/0:13,0:13:36.06:0,36,641	0/0:12,0:12:35.85:0,36,592	0/0:11,1:12:30.10:0,30,540	0/0:21,0:21:60.16:0,60,1092	0/0:8,0:8:24.08:0,24,451	0/1:21,4:23:99:118,0,887	0/1:4,3:7:19.97:20,0,151	0/0:13,0:13:39.13:0,39,735	0/0:7,0:7:21.07:0,21,397	0/0:2,0:2:6.02:0,6,113	0/0:9,0:9:21.07:0,21,334	0/0:9,0:9:27.09:0,27,472	0/1:22,2:26:79.63:80,0,880	0/1:14,2:16:52.34:52,0,618	0/0:20,0:20:12.84:0,13,970	0/1:5,1:7:22.69:23,0,190	0/0:12,0:12:36.12:0,36,653	0/0:9,0:9:27.09:0,27,510	0/0:10,0:10:30.10:0,30,552	0/0:9,0:9:27.09:0,27,499	0/0:14,0:14:39.13:0,39,735	0/1:11,7:18:99:249,0,559	0/0:21,0:21:48.16:0,48,886	0/1:9,4:11:99:145,0,337
chr10	85824347	.	GA	G	272.72	PASS	AB=0.878;AC=5;AF=0.089;AN=56;BaseQRankSum=8.069;DP=400;FS=6.428;HRun=3;HaplotypeScore=59.0006;InbreedingCoeff=-0.1087;MQ=57.22;MQ0=9;MQRankSum=-5.767;QD=3.00;ReadPosRankSum=-0.417;VQSLOD=-0.4636;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:29.20:0,29,706	0/0:6,0:6:15.05:0,15,216	0/0:29,1:9:21.52:0,22,280	0/0:11,1:7:9.03:0,9,106	0/0:11,0:11:30.10:0,30,431	0/0:11,0:11:33.11:0,33,464	0/0:11,1:12:33.07:0,33,452	0/0:24,0:24:66.19:0,66,928	0/0:8,0:8:22.32:0,22,305	0/1:23,3:23:52.99:53,0,670	0/0:9,0:9:1.18:0,1,190	0/0:15,0:15:45.14:0,45,630	0/0:7,0:7:21.07:0,21,300	0/0:3,0:3:9.02:0,9,111	0/0:11,0:11:27.09:0,27,386	0/0:9,0:9:27.09:0,27,389	0/1:26,0:25:30.99:31,0,643	0/0:15,0:15:41.42:0,41,570	0/0:22,0:22:24.99:0,25,745	0/1:7,0:7:5.35:5,0,193	0/0:13,0:13:39.13:0,39,557	0/0:11,0:11:33.11:0,33,475	0/0:12,0:12:36.11:0,36,499	0/0:11,0:11:33.11:0,33,469	0/0:14,0:14:39.13:0,39,559	0/1:12,7:19:99:185,0,461	0/0:20,0:20:48.16:0,48,690	0/1:9,4:11:99:111,0,269
chr10	85825752	.	C	CCAAAA	5264.13	PASS	AB=0.600;AC=13;AF=0.232;AN=56;BaseQRankSum=-7.139;DP=701;FS=15.849;HRun=0;HaplotypeScore=106.7628;InbreedingCoeff=0.8692;MQ=53.12;MQ0=41;MQRankSum=-0.342;QD=34.18;ReadPosRankSum=-4.705;VQSLOD=2.6897;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:49:78.01:0,78,1408	0/0:22,0:18:30.49:0,30,454	0/0:11,0:6:9.02:0,9,135	0/0:23,0:5:7.56:0,8,86	0/0:26,0:23:44.88:0,45,794	0/0:13,0:12:24.04:0,24,395	0/0:26,0:21:36.12:0,36,660	1/1:26,0:24:23.97:341,24,0	0/0:19,0:17:21.07:0,21,375	0/0:24,0:22:51.15:0,51,843	0/0:21,0:18:29.60:0,30,550	0/0:28,0:26:41.96:0,42,747	0/0:14,0:14:30.10:0,30,550	0/0:18,0:16:32.93:0,33,561	0/0:20,0:17:33.10:0,33,575	0/0:15,0:12:21.07:0,21,385	0/0:54,0:49:71.21:0,71,1144	0/0:33,0:31:54.17:0,54,951	1/1:18,5:16:24.06:541,24,0	1/1:4,16:21:48.13:1151,48,0	1/1:9,1:8:15.05:343,15,0	0/0:27,0:26:54.18:0,54,964	0/0:27,0:26:39.13:0,39,705	0/0:40,0:38:69.19:0,69,1201	0/0:33,0:29:63.22:0,63,1155	1/1:8,13:25:45.59:1115,46,0	1/1:5,23:29:54.19:1530,54,0	0/1:5,9:12:42.96:243,0,43
chr10	85826613	.	A	ACATG	474.85	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=0.926;DP=617;FS=4.518;HRun=0;HaplotypeScore=120.7297;InbreedingCoeff=0.6332;MQ=60.60;MQ0=10;MQRankSum=-4.002;QD=17.59;ReadPosRankSum=0.793;VQSLOD=3.2684;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:29.90:0,30,545	0/0:19,0:19:45:0,45,764	0/1:14,0:5:0.04:0,0,113	0/0:24,0:9:17.65:0,18,163	0/0:13,0:13:33.08:0,33,575	0/0:13,0:13:39.09:0,39,724	0/0:23,0:23:48.34:0,48,912	0/0:23,0:22:62.88:0,63,963	0/0:32,0:32:81.71:0,82,1644	0/0:24,0:23:61.60:0,62,956	0/0:20,0:19:48.07:0,48,831	0/0:22,0:22:60.12:0,60,1086	0/0:20,0:19:31.57:0,32,527	0/0:24,0:24:69.22:0,69,1376	0/0:27,0:27:72.63:0,73,1363	0/0:29,0:29:84.20:0,84,1477	0/0:29,0:29:59.97:0,60,1115	1/1:3,9:12:4.35:553,4,0	0/0:13,0:12:35.94:0,36,520	0/0:21,0:21:44.98:0,45,837	0/0:39,0:39:81.25:0,81,1521	0/0:27,0:26:63.14:0,63,1113	0/0:18,0:18:39:0,39,715	0/0:39,0:39:78.64:0,79,1420	0/0:19,0:19:39.11:0,39,736	0/0:18,0:18:50.87:0,51,778	0/0:23,0:23:48.15:0,48,895	0/0:9,0:9:24.06:0,24,406
chr10	85826614	.	T	TAC	1759.68	PASS	AB=0.847;AC=27;AF=0.519;AN=52;BaseQRankSum=-1.390;DP=641;FS=9.767;HRun=0;HaplotypeScore=98.2085;InbreedingCoeff=0.1324;MQ=60.02;MQ0=10;MQRankSum=0.911;QD=4.21;ReadPosRankSum=1.361;VQSLOD=1.6230;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:5.35:35,5,0	1/1:18,1:19:14.95:152,15,0	./.	./.	0/1:13,0:13:31.28:31,0,76	0/0:14,0:14:11.57:0,12,83	1/1:26,0:26:5.16:49,5,0	0/1:23,0:22:9.22:9,0,29	0/0:32,0:32:45.03:0,45,448	0/1:15,9:25:1.85:216,0,2	0/1:20,1:20:5.07:208,0,5	0/0:21,0:21:23.81:0,24,208	0/1:13,9:21:28.69:79,0,29	0/0:23,0:25:29.85:0,30,268	0/1:27,0:27:13.40:13,0,214	0/0:29,0:29:20.98:0,21,308	0/1:19,11:31:63.49:113,0,63	1/1:16,0:15:6.48:70,6,0	1/1:10,0:15:7.75:139,8,0	1/1:16,7:23:11.97:151,12,0	0/1:26,14:42:69.44:115,0,69	0/0:21,0:25:14.83:0,15,127	0/1:17,0:18:23.57:24,0,58	0/0:33,0:38:38.72:0,39,346	0/1:13,0:19:14.17:14,0,77	1/1:10,9:19:28.02:268,28,0	0/1:16,8:24:62.96:115,0,63	1/1:4,4:8:9.03:134,9,0
chr10	85828224	.	G	GTGTTTGTT	4451.22	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-0.106;DP=439;FS=0.630;HRun=0;HaplotypeScore=110.3147;InbreedingCoeff=0.8904;MQ=72.09;MQ0=1;MQRankSum=-8.913;QD=40.10;ReadPosRankSum=-4.825;VQSLOD=3.7254;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:93.30:0,93,2274	0/0:4,0:4:9.02:0,9,178	0/0:15,0:13:1.30:0,1,45	0/0:19,0:17:11.15:0,11,215	0/0:17,0:17:40.85:0,41,957	0/0:8,0:8:18.06:0,18,461	0/0:22,0:22:48.14:0,48,1125	1/1:20,0:20:30.10:977,30,0	0/0:11,0:11:15.05:0,15,353	0/0:21,0:20:39.13:0,39,975	0/0:17,0:17:39.13:0,39,970	0/0:11,0:11:12.04:0,12,306	0/0:11,0:11:17.99:0,18,323	0/0:15,0:15:18.06:0,18,435	0/0:12,0:12:27.09:0,27,674	0/0:5,0:5:12.04:0,12,307	0/0:31,0:31:63.22:0,63,1551	0/0:20,0:20:48.16:0,48,1227	1/1:15,2:19:24.05:666,24,0	1/1:11,3:15:13.84:336,14,0	1/1:9,3:12:10.80:354,11,0	0/0:8,0:8:15.04:0,15,335	0/0:13,0:13:30.08:0,30,662	0/0:20,0:20:39.13:0,39,995	0/0:10,0:10:24.08:0,24,610	1/1:13,9:22:33.09:1264,33,0	1/1:11,2:14:18.06:606,18,0	1/1:7,2:9:6.02:249,6,0
chr10	85829277	.	TACAC	T	260.43	PASS	AB=1.000;AC=12;AF=0.250;AN=48;BaseQRankSum=2.799;DP=534;FS=18.840;HRun=0;HaplotypeScore=92.0172;InbreedingCoeff=0.5688;MQ=71.90;MQ0=4;MQRankSum=-0.452;QD=2.28;ReadPosRankSum=0.649;VQSLOD=-0.1843;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:26.90:0,27,471	0/0:12,0:12:18.06:0,18,326	./.	./.	0/0:12,0:11:14.79:0,15,216	0/0:13,0:13:9.01:0,9,162	0/0:26,0:26:12:0,12,178	./.	0/0:21,0:21:12.02:0,12,177	0/0:21,0:21:27.09:0,27,512	./.	0/0:23,0:24:38.84:0,39,571	0/0:11,0:12:14.74:0,15,147	0/1:7,0:7:15.71:16,0,56	0/0:24,0:24:6.02:0,6,90	0/0:18,0:17:18.06:0,18,304	0/0:21,0:28:6.02:0,6,100	0/0:16,0:16:12.51:0,13,218	1/1:14,0:14:3:28,3,0	1/1:11,4:14:9.03:138,9,0	1/1:33,4:37:6.02:92,6,0	0/0:25,0:25:14.89:0,15,241	0/0:13,0:13:3.01:0,3,41	0/0:26,0:24:11.89:0,12,257	0/0:13,0:13:1.09:0,1,292	0/1:14,0:14:0.03:0,0,0	1/1:11,0:12:5.99:52,6,0	1/1:11,3:15:6.01:74,6,0
chr10	85829610	.	C	CT	3937.67	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-9.998;DP=615;FS=11.982;HRun=8;HaplotypeScore=61.1772;InbreedingCoeff=0.9045;MQ=68.86;MQ0=0;MQRankSum=-0.483;QD=23.16;ReadPosRankSum=-0.865;VQSLOD=3.1533;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,114,1032	0/0:12,0:12:30.02:0,30,274	0/0:27,0:20:23.52:0,24,254	0/1:27,0:25:22.53:23,0,238	0/0:21,0:21:60.02:0,60,546	0/0:23,0:23:66.02:0,66,598	0/0:23,0:23:57.03:0,57,522	1/1:5,23:28:69.20:796,69,0	0/0:14,0:14:38.98:0,39,346	0/0:14,0:14:30.01:0,30,275	0/0:20,0:20:57.03:0,57,521	0/0:24,0:24:63.03:0,63,576	0/0:20,0:20:51.02:0,51,467	0/0:19,0:19:48.01:0,48,435	0/0:26,0:26:60.01:0,60,549	0/0:24,0:23:51.02:0,51,467	0/0:33,0:33:96.05:0,96,879	0/0:22,0:22:44.58:0,45,437	1/1:5,12:16:14.63:403,15,0	1/1:1,8:9:24.04:263,24,0	1/1:1,7:8:21.06:242,21,0	0/0:15,0:15:38.51:0,39,337	0/0:17,0:17:42.02:0,42,384	0/0:33,0:33:89.97:0,90,808	0/0:15,0:15:42.02:0,42,384	1/1:7,25:32:50.75:826,51,0	1/1:4,30:34:83.85:969,84,0	1/1:1,13:14:36.11:415,36,0
chr10	85829811	.	A	AT	1369.88	PASS	AB=0.863;AC=18;AF=0.321;AN=56;BaseQRankSum=-5.199;DP=575;FS=2.900;HRun=14;HaplotypeScore=80.8467;InbreedingCoeff=0.2538;MQ=67.12;MQ0=0;MQRankSum=0.607;QD=4.98;ReadPosRankSum=-3.786;VQSLOD=1.5087;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,1:47:46.36:0,46,419	0/0:0,0:6:12.22:0,12,35	0/1:19,0:14:9.10:9,0,13	0/1:24,0:18:2.09:2,0,17	0/1:22,3:27:42.31:42,0,181	0/1:14,2:22:12.95:13,0,143	0/0:27,0:29:52.04:0,52,330	1/1:13,16:33:40.24:430,40,0	0/0:13,0:16:15.69:0,16,88	0/0:3,0:16:24.37:0,24,70	0/0:3,0:10:12.19:0,12,35	0/0:21,0:20:14.36:0,14,93	0/0:15,1:17:9.75:0,10,62	0/0:15,0:17:9.56:0,10,50	0/0:19,0:21:16.51:0,17,99	0/1:16,0:17:0.96:1,0,114	0/0:11,0:32:42.50:0,43,144	0/0:16,0:19:33.40:0,33,203	0/1:6,2:8:34.89:35,0,59	1/1:7,10:19:22.05:265,22,0	0/1:7,7:15:35.48:73,0,35	0/1:6,1:8:15.46:15,0,33	0/0:11,0:13:20.77:0,21,112	0/0:29,0:35:60.21:0,60,356	0/1:7,1:10:12.50:12,0,50	1/1:5,17:24:17.95:319,18,0	0/1:10,21:30:3.06:85,0,3	1/1:5,10:15:13.73:244,14,0
chr10	85830669	.	G	GC	6261.55	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=9.252;DP=420;FS=2.402;HRun=0;HaplotypeScore=58.1335;InbreedingCoeff=0.9466;MQ=67.86;MQ0=4;MQRankSum=0.491;QD=35.58;ReadPosRankSum=-0.354;VQSLOD=4.1783;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:21:18.24:169,18,0	0/0:8,0:8:24.07:0,24,318	0/0:26,0:13:5.68:0,6,330	0/0:37,0:23:28.06:0,28,488	0/0:20,0:20:54.13:0,54,684	0/0:20,0:20:60.17:0,60,801	1/1:1,0:13:7.10:119,7,0	1/1:1,31:32:93.20:1305,93,0	0/0:5,0:5:15.03:0,15,178	0/0:15,0:15:45.14:0,45,612	0/0:11,0:11:33.11:0,33,458	0/0:13,0:13:39.13:0,39,543	0/0:11,0:11:30.06:0,30,380	0/0:3,0:3:9.03:0,9,125	0/0:13,0:13:36.12:0,36,500	0/0:6,0:6:18.06:0,18,240	0/0:29,0:29:81.22:0,81,1074	1/1:0,23:23:69.23:1083,69,0	1/1:2,22:24:69.19:1046,69,0	1/1:1,8:9:24.01:350,24,0	1/1:0,11:11:30.10:476,30,0	0/0:4,0:4:12.04:0,12,167	0/0:4,0:4:12.04:0,12,167	0/0:8,0:8:20.27:0,20,291	0/0:10,0:10:30.09:0,30,404	1/1:0,19:19:57.13:857,57,0	1/1:1,11:12:27.09:430,27,0	1/1:0,12:12:27.09:426,27,0
chr10	85831213	.	TA	T	534.43	PASS	AB=0.905;AC=3;AF=0.054;AN=56;BaseQRankSum=6.430;DP=473;FS=2.535;HRun=10;HaplotypeScore=52.0041;InbreedingCoeff=0.5206;MQ=77.59;MQ0=0;MQRankSum=-0.526;QD=11.37;ReadPosRankSum=-0.163;VQSLOD=2.6648;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.22:0,90,986	0/0:3,0:3:9.02:0,9,100	0/0:16,0:15:25.52:0,26,233	0/0:13,0:12:19.12:0,19,144	0/0:17,0:17:48.11:0,48,522	0/0:24,0:23:54.15:0,54,597	0/0:11,0:11:33.08:0,33,357	0/0:18,0:18:45.07:0,45,477	0/0:15,0:15:36.09:0,36,391	0/0:18,0:18:48.04:0,48,509	0/0:16,0:16:36.63:0,37,427	0/0:19,0:19:51.09:0,51,550	0/0:8,0:8:21.06:0,21,232	0/0:9,1:10:0.97:0,1,211	0/0:14,0:14:42.11:0,42,465	0/0:13,0:13:36.10:0,36,398	0/0:32,0:32:96.20:0,96,1033	1/1:3,25:28:71.98:625,72,0	0/1:16,2:19:13.32:13,0,274	0/0:32,0:32:78.21:0,78,859	0/0:16,0:16:36.03:0,36,365	0/0:6,0:6:12.02:0,12,124	0/0:7,0:7:15.03:0,15,159	0/0:17,0:17:51.11:0,51,546	0/0:12,0:12:36.10:0,36,398	0/0:22,0:22:60.14:0,60,643	0/0:23,0:23:57.09:0,57,595	0/0:12,0:12:33.06:0,33,346
chr10	85832759	.	A	AACACACACAC	2338.24	PASS	AB=0.632;AC=17;AF=0.315;AN=54;BaseQRankSum=4.995;DP=443;FS=7.036;HRun=0;HaplotypeScore=122.6451;InbreedingCoeff=0.6705;MQ=65.86;MQ0=19;MQRankSum=-7.882;QD=14.99;ReadPosRankSum=-4.671;VQSLOD=-0.2071;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,4:25:3.48:118,3,0	0/0:5,0:4:2.80:0,3,26	0/0:46,0:22:3.01:0,3,49	0/0:52,0:24:11.94:0,12,208	0/0:16,0:16:24.08:0,24,712	0/0:15,0:18:21.07:0,21,611	1/1:16,4:34:3.01:149,3,0	1/1:14,0:17:29.26:703,29,0	0/0:6,0:6:9.03:0,9,270	0/0:9,0:16:18.04:0,18,178	0/0:7,0:7:11.96:0,12,114	0/0:7,0:6:18.06:0,18,477	0/0:7,0:7:14.72:0,15,371	0/0:6,0:6:9.03:0,9,222	0/0:11,0:12:7.44:0,7,248	0/0:11,0:10:18.06:0,18,541	0/0:7,0:7:11.94:0,12,106	0/1:5,1:12:81.15:142,0,81	1/1:11,0:13:14.64:375,15,0	1/1:4,0:8:3.01:111,3,0	./.	0/0:12,0:14:15.05:0,15,436	0/0:10,0:10:17.59:0,18,540	0/0:24,0:24:45.14:0,45,1115	0/0:6,0:7:6.02:0,6,180	1/1:17,0:20:23.42:549,23,0	1/1:9,0:11:10.28:258,10,0	1/1:5,0:5:6.02:108,6,0
chr10	85832787	.	C	CA	1184.95	PASS	AB=0.879;AC=14;AF=0.250;AN=56;BaseQRankSum=2.729;DP=453;FS=8.841;HRun=1;HaplotypeScore=50.3116;InbreedingCoeff=0.6565;MQ=39.86;MQ0=66;MQRankSum=-3.896;QD=11.07;ReadPosRankSum=-1.214;VQSLOD=0.4643;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:19:0.46:0,0,29	0/0:4,0:2:1.89:0,2,12	0/0:46,0:1:3.01:0,3,41	0/0:55,0:10:21.03:0,21,277	0/0:12,0:11:30.10:0,30,406	0/0:22,0:18:20.83:0,21,273	0/0:25,0:23:10.10:0,10,132	1/1:3,15:15:45.13:611,45,0	0/0:6,0:5:12.03:0,12,164	0/0:17,0:16:19.20:0,19,303	0/0:7,0:7:2.77:0,3,44	0/0:15,0:10:21.07:0,21,290	0/0:8,0:6:11.74:0,12,167	0/0:6,0:5:12.04:0,12,163	0/0:14,0:14:23.25:0,23,263	0/0:11,0:9:21.02:0,21,271	0/0:10,0:9:8.02:0,8,126	0/0:15,0:13:9.80:0,10,140	1/1:9,3:10:27.06:332,27,0	0/1:6,2:6:0:0,0,0	1/1:13,4:12:2.02:21,2,0	0/0:15,0:12:21.07:0,21,284	0/0:11,0:10:20.81:0,21,291	0/0:37,0:32:60.09:0,60,740	0/0:9,0:7:12.92:0,13,157	1/1:6,10:11:2.79:183,3,0	1/1:3,5:9:14.37:152,14,0	1/1:3,1:2:3.01:42,3,0
chr10	85833136	.	TACACACACACACACACACACACACACAC	T	772.12	PASS	AB=0.915;AC=15;AF=0.288;AN=52;BaseQRankSum=4.177;DP=402;FS=22.151;HRun=0;HaplotypeScore=253.3125;InbreedingCoeff=0.4835;MQ=71.51;MQ0=10;MQRankSum=0.056;QD=5.22;ReadPosRankSum=-2.462;VQSLOD=0.3823;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:28:39.54:40,0,1108	./.	0/0:27,0:14:5.92:0,6,200	0/0:25,0:19:9:0,9,216	0/0:6,0:6:9.03:0,9,746	0/0:7,0:8:21.07:0,21,1839	0/0:28,0:33:20.42:0,20,484	1/1:17,0:17:5.91:80,6,0	0/0:8,0:8:9.03:0,9,833	0/0:9,0:9:12.04:0,12,519	./.	0/0:9,0:9:18.95:0,19,1667	0/0:9,0:9:9.03:0,9,504	0/0:12,0:14:18.06:0,18,1714	0/0:7,0:7:9.03:0,9,696	0/0:3,0:3:6.02:0,6,678	0/0:30,0:30:27.97:0,28,642	0/1:10,0:14:60.35:60,0,221	1/1:12,5:16:15.01:351,15,0	1/1:4,0:4:3:26,3,0	1/1:42,0:38:8.84:76,9,0	0/0:3,0:3:3.01:0,3,294	0/0:6,0:6:9.03:0,9,588	0/0:45,0:45:77.55:0,78,7079	0/0:8,0:9:11.41:0,11,1292	0/1:11,0:11:13.98:48,0,14	1/1:7,1:8:6.02:213,6,0	1/1:5,0:5:5.94:41,6,0
chr10	85833173	.	ACACACACACACACACC	A	1038.49	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=3.770;DP=382;FS=0.852;HRun=0;HaplotypeScore=135.6290;InbreedingCoeff=0.3252;MQ=49.39;MQ0=14;MQRankSum=-1.072;QD=8.24;ReadPosRankSum=2.056;VQSLOD=2.5966;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:26:99:206,0,275	1/1:2,0:2:2.97:20,3,0	0/0:11,0:4:12.01:0,12,112	0/0:8,0:3:8.91:0,9,72	0/0:9,0:9:18.96:0,19,680	0/0:17,0:16:40.23:0,40,1291	0/1:22,0:21:99:146,0,211	0/0:7,0:7:14.86:0,15,105	0/0:15,0:15:31.30:0,31,927	1/1:9,0:9:14.70:164,15,0	1/1:2,0:1:3:25,3,0	0/0:21,0:20:47.20:0,47,1612	0/0:7,0:7:21.04:0,21,602	0/0:17,0:17:33.56:0,34,1463	0/0:8,0:8:16.81:0,17,413	0/0:13,0:13:36.05:0,36,909	1/1:3,27:30:10.09:497,10,0	0/1:14,0:14:58.04:58,0,203	0/1:13,0:13:58.26:58,0,209	0/0:1,0:1:2.97:0,3,20	0/0:35,0:32:49.57:0,50,390	0/0:5,0:5:6:0,6,142	0/0:6,0:5:8.93:0,9,182	0/0:50,0:50:99:0,111,5069	0/0:11,0:9:14.88:0,15,664	0/0:12,0:12:35.75:0,36,270	0/1:7,0:7:22.35:22,0,87	0/0:3,0:3:8.94:0,9,65
chr10	85833449	.	T	TAA	4221.83	PASS	AC=26;AF=0.481;AN=54;BaseQRankSum=-2.997;DP=367;FS=26.505;HRun=10;HaplotypeScore=53.5311;InbreedingCoeff=0.9362;MQ=77.66;MQ0=0;MQRankSum=-1.600;QD=18.76;ReadPosRankSum=-0.681;VQSLOD=1.4785;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:25:41.63:588,42,0	1/1:0,1:1:3.01:45,3,0	0/0:14,0:15:20.52:0,21,149	0/0:10,0:9:14.75:0,15,118	0/0:8,0:8:8.98:0,9,92	0/0:12,0:13:38.81:0,39,370	1/1:7,25:33:53.67:770,54,0	1/1:7,1:19:24.79:120,25,0	0/0:13,0:14:35.75:0,36,329	1/1:2,10:13:30.09:431,30,0	./.	0/0:9,0:9:21.03:0,21,214	0/0:5,0:5:15.02:0,15,145	0/0:6,0:6:15.01:0,15,153	0/0:7,0:7:15.03:0,15,153	0/0:5,0:5:15.03:0,15,153	1/1:3,21:25:48.16:714,48,0	1/1:4,27:32:47.77:963,48,0	1/1:2,1:11:22.03:110,22,0	1/1:1,0:7:9.98:35,10,0	1/1:2,0:11:19.96:70,20,0	0/0:8,0:8:21.01:0,21,207	0/0:8,0:8:12.01:0,12,122	0/0:20,0:20:41.97:0,42,408	0/0:13,0:13:39.09:0,39,397	1/1:4,1:28:60.95:262,61,0	1/1:1,0:10:12.48:44,12,0	1/1:1,0:10:19.71:69,20,0
chr10	85834101	.	C	CG	324.20	PASS	AB=1.000;AC=4;AF=0.080;AN=50;BaseQRankSum=-3.342;DP=275;FS=1.087;HRun=6;HaplotypeScore=35.5057;InbreedingCoeff=0.3937;MQ=72.19;MQ0=0;MQRankSum=1.402;QD=12.97;ReadPosRankSum=0.564;VQSLOD=1.2836;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.09:0,45,457	0/0:3,0:3:3.01:0,3,31	0/1:5,0:5:0:0,0,0	0/1:4,0:4:6.25:6,0,19	0/0:3,0:3:6.01:0,6,61	0/0:2,0:2:6.01:0,6,61	0/0:38,0:38:99:0,105,1070	0/0:8,0:7:21.04:0,21,209	0/0:8,0:8:18.04:0,18,183	0/0:8,0:8:21:0,21,204	./.	0/0:8,0:8:24.04:0,24,237	0/0:12,0:12:23.98:0,24,231	0/0:4,0:4:9.02:0,9,92	0/0:6,0:6:15.03:0,15,153	0/0:2,0:2:6.01:0,6,61	0/0:28,0:28:66.14:0,66,673	1/1:2,14:16:33.11:415,33,0	0/0:5,0:5:12.02:0,12,122	./.	0/0:55,0:55:99:0,135,1362	./.	0/0:2,0:2:3:0,3,31	0/0:24,0:24:66.15:0,66,673	0/0:4,0:4:12.03:0,12,122	0/0:6,0:6:18.03:0,18,178	0/0:6,0:6:12.03:0,12,122	0/0:1,0:1:3.01:0,3,31
chr10	85835075	.	CCAACGCCTGCTCTGATCGCT	C	5777.61	PASS	AB=0.976;AC=25;AF=0.463;AN=54;BaseQRankSum=9.305;DP=575;FS=0.000;HRun=0;HaplotypeScore=293.5839;InbreedingCoeff=0.8439;MQ=74.29;MQ0=1;MQRankSum=-7.845;QD=23.97;ReadPosRankSum=-0.915;VQSLOD=3.1204;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,3:21:5.50:444,6,0	1/1:5,4:9:15.05:762,15,0	0/0:25,0:25:12.04:0,12,407	0/0:19,0:19:18.53:0,19,760	0/0:11,0:11:12.04:0,12,837	0/0:27,0:27:48.14:0,48,3305	1/1:22,0:22:5.99:50,6,0	1/1:21,5:26:15.02:208,15,0	0/0:28,0:28:54.19:0,54,4247	1/1:8,6:14:18.06:954,18,0	1/1:6,2:8:6.02:244,6,0	0/0:39,0:39:54.15:0,54,4151	0/0:25,0:25:39.12:0,39,2905	0/0:31,0:31:57.14:0,57,3638	0/0:18,0:18:27.09:0,27,2488	0/0:17,0:17:24.07:0,24,1575	1/1:13,4:17:15:613,15,0	1/1:10,7:17:1.25:156,1,0	1/1:17,7:24:21.06:379,21,0	1/1:8,4:12:15.03:659,15,0	0/1:40,1:41:2.30:18,0,2	0/0:17,0:17:27.09:0,27,1984	0/0:16,0:16:33.06:0,33,2208	0/0:38,0:37:78.27:0,78,6194	0/0:18,0:18:33.11:0,33,2252	1/1:9,3:12:9.03:477,9,0	1/1:13,5:18:18.02:815,18,0	./.
chr10	85835183	.	CA	C	12702.43	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=13.344;DP=669;FS=2.387;HRun=1;HaplotypeScore=75.8729;InbreedingCoeff=0.9920;MQ=88.61;MQ0=0;MQRankSum=-4.141;QD=38.85;ReadPosRankSum=-0.064;VQSLOD=5.3023;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:99:1551,111,0	1/1:0,3:3:9.03:126,9,0	0/0:26,0:27:53.14:0,53,1031	0/0:24,0:24:69.22:0,69,1057	0/0:19,0:19:54.17:0,54,839	0/0:18,0:18:54.18:0,54,863	1/1:0,23:23:66.22:922,66,0	1/1:0,31:31:90.30:1255,90,0	0/0:25,0:25:75.26:0,75,1192	1/1:0,31:31:90.30:1252,90,0	1/1:0,16:16:39.13:542,39,0	0/0:21,0:21:60.20:0,60,957	0/0:25,0:25:75.26:0,75,1197	0/0:24,0:24:72.23:0,72,1128	0/0:32,0:32:96.31:0,96,1512	0/0:23,0:23:69.22:0,69,1081	1/1:0,33:33:90.30:1257,90,0	0/0:25,0:25:66.18:0,66,1027	1/1:0,19:19:57.19:796,57,0	1/1:0,19:19:51.17:712,51,0	1/1:0,34:34:90.30:1255,90,0	0/0:24,0:24:72.23:0,72,1128	0/0:20,0:20:60.20:0,60,959	0/0:20,0:20:60.20:0,60,956	0/0:15,0:15:39.13:0,39,624	1/1:0,36:36:99:1489,108,0	1/1:0,29:29:75.25:1046,75,0	1/1:0,14:14:36.12:500,36,0
chr10	85835498	.	GA	G	1865.14	PASS	AC=26;AF=0.500;AN=52;BaseQRankSum=3.312;DP=308;FS=20.379;HRun=8;HaplotypeScore=56.6109;InbreedingCoeff=0.8868;MQ=42.52;MQ0=22;MQRankSum=-6.758;QD=13.42;ReadPosRankSum=3.456;VQSLOD=1.6682;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,9:16:23.93:231,24,0	1/1:0,3:3:3:29,3,0	./.	./.	0/0:14,0:14:18.06:0,18,218	0/0:16,0:15:20.96:0,21,221	1/1:10,5:14:8.87:111,9,0	1/1:7,8:13:24.02:231,24,0	0/0:9,0:9:14.86:0,15,147	1/1:7,10:16:36.05:346,36,0	1/1:0,3:3:9.01:87,9,0	0/0:11,0:11:14.78:0,15,158	0/0:18,0:18:31.34:0,31,280	0/0:13,0:13:17.54:0,18,190	0/0:10,0:10:15:0,15,153	0/0:13,0:13:24.04:0,24,273	1/1:4,6:9:14.05:143,14,0	0/0:10,0:9:21.06:0,21,254	1/1:6,7:9:18.03:173,18,0	1/1:6,5:10:18.02:172,18,0	1/1:3,1:4:2.98:29,3,0	0/0:4,0:4:9.03:0,9,109	0/0:8,0:6:8.70:0,9,79	0/0:21,0:20:24.94:0,25,250	0/0:8,0:8:12.51:0,13,146	1/1:2,5:7:15.02:144,15,0	1/1:3,8:11:23.97:231,24,0	1/1:5,8:9:15:145,15,0
chr10	85835551	.	G	GGGCTGGAGAGGT	17816.99	PASS	AC=26;AF=0.481;AN=54;BaseQRankSum=-2.982;DP=318;FS=26.785;HRun=0;HaplotypeScore=119.7028;InbreedingCoeff=0.9462;MQ=63.83;MQ0=2;MQRankSum=-10.839;QD=97.36;ReadPosRankSum=-0.986;VQSLOD=2.7572;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,6:18:21.07:1190,21,0	1/1:0,3:3:9.03:550,9,0	0/0:26,0:19:23.30:0,23,1038	0/0:17,0:10:15.05:0,15,425	0/0:10,0:10:24.08:0,24,802	0/0:13,0:13:36.11:0,36,1244	1/1:13,2:11:30.10:1358,30,0	1/1:19,5:23:57.18:2740,57,0	0/0:8,0:8:21.07:0,21,783	1/1:6,6:13:33.11:1615,33,0	1/1:6,4:10:15.05:812,15,0	0/0:3,0:3:9.03:0,9,306	0/0:8,0:8:18.06:0,18,621	0/0:4,0:4:12.04:0,12,396	0/0:6,0:6:18.05:0,18,522	0/0:3,0:3:9.03:0,9,284	1/1:11,7:20:30.10:1407,30,0	1/1:9,5:18:30.10:1437,30,0	1/1:10,3:13:36.12:2082,36,0	1/1:3,4:8:21.07:1044,21,0	1/1:4,4:7:9.50:520,10,0	0/0:4,0:4:12.04:0,12,448	0/0:7,0:7:21.05:0,21,606	0/0:15,0:15:33.11:0,33,1153	0/0:8,0:8:21.07:0,21,719	1/1:13,5:21:48.15:2146,48,0	1/1:3,3:7:15.05:917,15,0	./.
chr10	85835697	.	A	AT	5149.59	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-4.990;DP=357;FS=0.471;HRun=8;HaplotypeScore=37.3747;InbreedingCoeff=0.9219;MQ=65.72;MQ0=2;MQRankSum=-1.418;QD=22.10;ReadPosRankSum=0.291;VQSLOD=4.3921;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,18:26:45.13:519,45,0	1/1:0,0:8:22.73:116,23,0	0/0:9,0:7:8.93:0,9,71	0/0:13,0:6:5.98:0,6,46	0/0:17,0:17:42:0,42,377	0/0:10,0:10:27.01:0,27,247	1/1:1,7:8:15.04:173,15,0	1/1:5,30:32:78.15:854,78,0	0/0:6,0:6:15.01:0,15,137	1/1:0,0:15:39.95:210,40,0	1/1:0,0:7:17.30:97,17,0	0/0:10,0:10:23.85:0,24,219	0/0:5,0:5:9:0,9,82	0/0:8,0:8:15.01:0,15,137	0/0:5,0:5:12.01:0,12,110	0/0:4,0:4:11.97:0,12,102	1/1:4,0:26:54.01:275,54,0	1/1:5,22:27:51.15:588,51,0	1/1:1,16:16:42.08:468,42,0	1/1:0,13:13:39.12:450,39,0	1/1:1,6:7:15.04:173,15,0	0/0:1,0:1:3:0,3,27	0/0:5,0:5:12.01:0,12,110	0/0:12,0:12:33.01:0,33,298	0/0:19,0:19:51.02:0,51,463	1/1:2,16:18:45.11:499,45,0	1/1:0,14:14:33.10:381,33,0	1/1:1,10:11:30.09:346,30,0
chr10	85835818	.	T	TA	1430.23	PASS	AB=0.871;AC=18;AF=0.321;AN=56;BaseQRankSum=-3.733;DP=401;FS=1.200;HRun=14;HaplotypeScore=51.2728;InbreedingCoeff=0.4990;MQ=75.05;MQ0=4;MQRankSum=0.819;QD=6.50;ReadPosRankSum=-2.215;VQSLOD=1.5510;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,3:21:3.05:0,3,145	0/0:6,0:6:11.76:0,12,77	0/1:32,0:20:1.92:13,0,2	0/1:36,1:15:7.91:13,0,8	0/0:11,0:12:10.22:0,10,59	0/0:11,0:11:17.56:0,18,115	0/0:13,0:12:5.67:0,6,38	1/1:6,29:35:70.30:563,70,0	0/0:6,0:8:15.84:0,16,89	0/0:14,0:14:23.47:0,23,150	0/0:11,0:11:20.65:0,21,135	0/0:5,0:5:5.89:0,6,38	0/1:3,0:3:13.27:21,0,13	0/0:14,0:14:20.59:0,21,134	0/0:10,0:12:13.08:0,13,82	0/0:4,0:5:10.86:0,11,63	0/0:14,0:15:22.68:0,23,140	0/0:17,1:18:8.14:0,8,172	1/1:10,10:21:23.96:205,24,0	0/1:3,8:11:4.31:83,0,4	1/1:6,9:15:26.75:211,27,0	0/0:5,0:5:5.78:0,6,38	0/1:9,1:12:7.62:8,0,70	0/0:9,0:10:19.72:0,20,120	0/1:6,3:9:28.99:29,0,91	1/1:5,6:11:14.97:127,15,0	1/1:4,7:12:18.15:135,18,0	1/1:11,9:20:24:211,24,0
chr10	85836227	.	G	GT	4909.58	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-11.576;DP=369;FS=18.968;HRun=8;HaplotypeScore=37.4825;InbreedingCoeff=0.9689;MQ=82.65;MQ0=0;MQRankSum=-2.761;QD=29.22;ReadPosRankSum=-0.883;VQSLOD=2.8877;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:54.02:0,54,494	1/1:1,6:7:21.06:240,21,0	0/0:18,0:18:33:0,33,298	0/0:7,0:7:9:0,9,82	0/0:14,0:14:36.01:0,36,329	0/0:13,0:13:33.01:0,33,302	0/0:12,0:12:27:0,27,247	1/1:4,21:25:60.15:671,60,0	0/0:9,0:9:21.01:0,21,192	1/1:2,8:10:24.07:277,24,0	1/1:2,14:16:42.12:485,42,0	0/0:4,0:4:12.01:0,12,110	0/0:3,0:3:9:0,9,82	0/0:8,0:8:21:0,21,188	0/0:11,0:11:30.02:0,30,275	0/0:7,0:7:18.01:0,18,165	1/1:3,27:30:75.22:865,75,0	0/0:27,0:27:78.04:0,78,714	1/1:3,12:16:39.11:447,39,0	1/1:2,12:14:11.65:388,12,0	1/1:0,16:16:42.12:485,42,0	0/0:10,0:10:30.02:0,30,274	0/0:9,0:9:24:0,24,215	0/0:11,0:11:27.01:0,27,247	0/0:16,0:16:42.01:0,42,384	1/1:1,15:16:41.96:464,42,0	1/1:1,6:7:18.05:208,18,0	1/1:0,11:11:33.10:381,33,0
chr10	85836259	.	A	AT	705.59	PASS	AB=0.857;AC=5;AF=0.089;AN=56;BaseQRankSum=-5.246;DP=331;FS=4.368;HRun=8;HaplotypeScore=41.7062;InbreedingCoeff=0.7017;MQ=79.04;MQ0=0;MQRankSum=0.214;QD=19.60;ReadPosRankSum=0.819;VQSLOD=3.1526;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:51.11:574,51,0	0/0:6,0:6:11.99:0,12,110	0/0:13,0:13:16.98:0,17,209	0/1:5,1:5:17.62:18,0,92	0/0:9,0:9:24.01:0,24,220	0/0:14,0:14:33.01:0,33,302	1/1:1,8:9:21.06:242,21,0	0/0:28,0:27:69.03:0,69,632	0/0:7,0:7:14.98:0,15,131	0/0:8,0:8:20.99:0,21,188	0/0:15,0:15:39.01:0,39,357	0/0:4,0:4:11.99:0,12,105	0/0:4,0:4:12.01:0,12,110	0/0:3,0:3:6:0,6,55	0/0:9,0:9:20.99:0,21,187	0/0:8,0:8:24.01:0,24,220	0/0:32,0:32:72.02:0,72,659	0/0:19,0:20:53.06:0,53,473	0/0:14,0:14:39:0,39,351	0/0:8,0:8:21.01:0,21,192	0/0:14,0:14:39:0,39,352	0/0:11,0:11:30.02:0,30,274	0/0:8,0:8:24:0,24,215	0/0:11,0:11:27:0,27,241	0/0:12,0:12:36.02:0,36,329	0/0:12,0:12:23.98:0,24,215	0/0:12,0:12:23.99:0,24,220	0/0:13,0:13:39.02:0,39,357
chr10	85836405	.	TATATATATATATATATATATATATAA	T	1124.57	PASS	AB=0.875;AC=10;AF=0.333;AN=30;BaseQRankSum=3.873;DP=104;FS=4.028;HRun=0;HaplotypeScore=73.1245;InbreedingCoeff=0.2673;MQ=45.00;MQ0=23;MQRankSum=-0.796;QD=37.49;ReadPosRankSum=3.502;VQSLOD=1.1762;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:6.02:0,6,296	./.	0/0:14,0:1:3.01:0,3,34	0/0:21,0:3:0.47:0,0,1	./.	./.	0/0:1,0:1:3.01:0,3,146	0/0:13,0:11:14.21:0,14,64	./.	1/1:1,1:2:3.01:195,3,0	1/1:0,10:10:3.01:203,3,0	./.	./.	./.	./.	./.	0/1:4,2:4:99:282,0,164	0/0:13,0:8:7.84:0,8,302	0/0:3,0:3:6.26:0,6,30	./.	./.	0/0:1,0:1:3.01:0,3,193	./.	./.	0/0:2,0:2:3.01:0,3,194	1/1:1,0:1:3.01:186,3,0	1/1:4,0:3:0.09:181,0,0	0/1:7,0:5:0.36:181,0,0
chr10	85836429	.	TAA	T	1589.57	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=1.290;DP=164;FS=8.296;HRun=3;HaplotypeScore=33.7062;InbreedingCoeff=0.6351;MQ=67.21;MQ0=6;MQRankSum=-4.187;QD=11.86;ReadPosRankSum=1.501;VQSLOD=0.0336;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:23.89:184,24,0	1/1:4,0:4:8.88:61,9,0	0/0:8,0:4:6.89:0,7,65	0/1:16,0:5:1.66:2,0,15	0/0:3,0:3:9:0,9,78	0/0:1,0:1:3:0,3,27	1/1:0,3:3:3:25,3,0	1/1:13,0:13:38.76:296,39,0	0/0:1,0:1:3:0,3,27	1/1:1,9:10:5.98:47,6,0	1/1:10,0:10:3:29,3,0	0/0:3,0:3:8.88:0,9,70	0/0:1,0:1:2.99:0,3,23	0/0:1,0:1:3:0,3,27	0/0:2,0:2:6.01:0,6,56	0/0:1,0:1:3:0,3,28	1/1:13,0:13:16.52:111,17,0	1/1:10,0:9:23.92:189,24,0	1/1:8,0:8:23.83:178,24,0	1/1:5,0:5:11.97:96,12,0	1/1:5,0:5:5.94:42,6,0	0/0:2,0:2:6.01:0,6,55	0/0:2,0:2:6:0,6,54	0/0:2,0:2:6:0,6,54	0/0:3,0:3:6.01:0,6,55	1/1:1,6:7:8.96:74,9,0	1/1:6,0:6:14.91:119,15,0	1/1:16,0:16:41.77:323,42,0
chr10	85838290	.	GC	G	2032.49	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.468;DP=626;FS=12.795;HRun=3;HaplotypeScore=70.5384;InbreedingCoeff=0.9943;MQ=86.89;MQ0=0;MQRankSum=-4.536;QD=29.89;ReadPosRankSum=0.756;VQSLOD=2.1467;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,41:46:99:1448,117,0	0/0:12,0:12:36.09:0,36,459	0/0:23,0:23:51.06:0,51,641	0/0:22,0:22:48.20:0,48,674	0/0:20,0:20:60.16:0,60,800	0/0:21,0:21:63.18:0,63,864	1/1:1,21:22:57.18:706,57,0	0/0:26,0:26:78.25:0,78,1104	0/0:23,0:23:66.22:0,66,947	0/0:29,0:29:84.28:0,84,1187	0/0:19,0:19:54.18:0,54,777	0/0:26,0:26:78.26:0,78,1121	0/0:29,0:29:84.27:0,84,1189	0/0:33,0:33:93.31:0,93,1337	0/0:33,0:33:96.31:0,96,1361	0/0:22,0:22:66.19:0,66,911	0/0:35,0:35:99:0,105,1505	0/0:23,0:23:66.17:0,66,907	0/0:19,0:19:54.12:0,54,733	0/0:8,0:8:24.07:0,24,327	0/0:30,0:30:84.26:0,84,1186	0/0:17,0:17:51.14:0,51,695	0/0:12,0:12:33.11:0,33,475	0/0:23,0:23:66.21:0,66,927	0/0:10,0:10:30.10:0,30,431	0/0:18,0:18:51.15:0,51,713	0/0:19,0:19:57.19:0,57,818	0/0:6,0:6:18.05:0,18,241
chr10	85840611	.	G	GCA	2752.61	PASS	AB=0.844;AC=26;AF=0.464;AN=56;BaseQRankSum=6.056;DP=536;FS=5.252;HRun=0;HaplotypeScore=116.6896;InbreedingCoeff=0.7452;MQ=61.56;MQ0=6;MQRankSum=-5.829;QD=9.52;ReadPosRankSum=-4.333;VQSLOD=2.4060;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,14:30:22.66:565,0,23	1/1:5,0:6:3:26,3,0	0/0:20,0:8:11.68:0,12,115	0/1:28,0:14:20.32:20,0,26	0/0:5,0:5:6.02:0,6,69	0/0:22,0:23:41.86:0,42,462	1/1:16,11:27:10.47:597,10,0	1/1:25,0:25:20.97:188,21,0	0/0:20,0:20:45.13:0,45,520	1/1:21,0:21:26.71:219,27,0	0/0:10,0:11:0.45:0,0,1	0/0:25,0:27:62.47:0,62,695	0/0:15,0:15:30.09:0,30,347	0/0:19,0:19:38.93:0,39,418	0/0:20,0:23:35.93:0,36,385	0/0:15,0:16:32.92:0,33,351	1/1:14,1:17:17.68:150,18,0	1/1:6,0:14:30.01:272,30,0	1/1:17,0:19:11.70:106,12,0	1/1:10,0:13:14.75:126,15,0	1/1:47,0:47:4.27:66,4,0	0/0:11,0:11:21.05:0,21,232	0/0:6,0:6:12.03:0,12,139	0/0:35,0:37:65.86:0,66,718	0/0:12,0:13:38.95:0,39,429	1/1:20,0:24:43.81:396,44,0	1/1:4,0:8:11.74:90,12,0	1/1:7,0:8:15.01:142,15,0
chr10	85840702	.	G	GC	2867.97	PASS	AB=0.598;AC=15;AF=0.268;AN=56;BaseQRankSum=-6.508;DP=576;FS=20.373;HRun=9;HaplotypeScore=66.7281;InbreedingCoeff=0.7263;MQ=71.98;MQ0=1;MQRankSum=-0.642;QD=14.34;ReadPosRankSum=-4.337;VQSLOD=1.0701;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:7,22:28:16.06:405,16,0	0/0:7,0:7:18:0,18,156	0/0:21,0:21:23.96:0,24,207	0/0:19,0:18:17.92:0,18,153	0/0:19,0:19:53.98:0,54,469	0/0:21,1:22:14.84:0,15,357	0/1:4,16:21:7.16:368,0,7	1/1:6,8:14:25.28:256,25,0	0/0:19,0:19:44.97:0,45,391	0/0:23,0:23:56.96:0,57,491	0/0:11,0:11:29.99:0,30,260	0/0:21,0:21:53.99:0,54,469	0/0:16,0:16:35.95:0,36,307	0/0:29,0:29:62.93:0,63,542	0/0:21,0:21:53.98:0,54,469	0/0:13,0:13:32.96:0,33,282	0/0:29,0:29:71.97:0,72,625	0/0:0,0:16:28.27:0,28,84	0/1:13,11:24:10.22:323,0,10	0/1:2,8:10:7.97:148,0,8	1/1:17,33:50:19.97:641,20,0	0/0:18,0:18:53.99:0,54,469	0/0:17,0:17:47.99:0,48,416	0/0:32,0:32:71.94:0,72,625	0/0:22,1:23:26.81:0,27,461	1/1:5,15:20:42.09:447,42,0	1/1:4,17:20:4.06:268,4,0	1/1:3,8:11:18.05:199,18,0
chr10	85841908	.	T	TAC	541.32	PASS	AB=0.867;AC=11;AF=0.324;AN=34;BaseQRankSum=-3.991;DP=107;FS=30.434;HRun=0;HaplotypeScore=25.0757;InbreedingCoeff=0.2665;MQ=80.85;MQ0=5;MQRankSum=-0.687;QD=12.89;ReadPosRankSum=-0.953;VQSLOD=1.4266;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:1:2.99:0,3,24	./.	0/0:7,0:5:2.60:0,3,10	0/0:13,0:3:6.66:0,7,35	./.	./.	0/0:1,0:1:2.99:0,3,24	0/1:21,0:21:9.28:285,0,9	./.	0/0:1,0:1:3:0,3,28	./.	./.	./.	./.	0/0:1,0:1:3:0,3,25	0/0:2,0:2:5.99:0,6,50	0/0:26,0:26:47.82:0,48,369	0/0:9,0:9:1.87:0,2,141	1/1:2,0:2:6.01:56,6,0	1/1:2,0:2:5.99:50,6,0	0/1:5,0:5:14.23:16,0,14	./.	./.	./.	0/0:2,0:2:6:0,6,51	1/1:3,0:3:9.01:83,9,0	1/1:3,0:3:5.59:35,6,0	0/1:2,4:6:4.96:136,0,5
chr10	85842062	.	AACACACAC	A	182.32	PASS	AC=10;AF=0.208;AN=48;BaseQRankSum=3.342;DP=438;FS=3.406;HRun=0;HaplotypeScore=92.4302;InbreedingCoeff=0.5201;MQ=59.86;MQ0=21;MQRankSum=-3.650;QD=2.80;ReadPosRankSum=-2.071;VQSLOD=1.3948;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:28:21.03:0,21,310	1/1:5,0:6:3.01:56,3,0	./.	./.	0/0:7,0:7:9.03:0,9,366	0/0:10,0:10:9.03:0,9,192	0/0:19,0:17:2.90:0,3,16	0/0:19,0:17:0:0,0,0	./.	1/1:12,2:14:2.21:73,2,0	1/1:8,3:10:5.98:94,6,0	0/0:8,0:9:10.83:0,11,160	0/0:8,0:7:12.04:0,12,311	0/0:4,0:4:3.01:0,3,91	0/0:12,0:14:12.04:0,12,322	0/0:8,0:8:3.01:0,3,97	1/1:20,5:24:3.01:74,3,0	./.	0/0:8,0:7:3.01:0,3,93	0/0:6,0:6:9.02:0,9,139	0/0:26,0:23:18.04:0,18,579	0/0:10,0:10:15.05:0,15,378	0/0:7,0:7:6.02:0,6,189	0/0:26,0:30:27.05:0,27,619	1/1:9,0:8:1.55:4,2,0	0/0:18,0:17:18.06:0,18,520	0/0:9,0:9:15.05:0,15,332	0/0:7,0:8:12.04:0,12,292
chr10	85842588	.	T	TGG	871.93	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=-0.477;DP=285;FS=0.786;HRun=8;HaplotypeScore=46.4485;InbreedingCoeff=0.8422;MQ=90.55;MQ0=0;MQRankSum=-2.055;QD=16.15;ReadPosRankSum=-4.294;VQSLOD=-0.3209;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:48.09:0,48,526	1/1:0,3:3:5.77:95,6,0	0/0:17,0:16:26.07:0,26,268	0/0:10,0:11:16.56:0,17,250	0/0:12,0:12:27.04:0,27,282	0/0:6,0:6:12.02:0,12,133	0/0:14,0:14:39.10:0,39,434	1/1:6,0:6:2.91:7,3,0	0/0:15,0:15:45.12:0,45,502	1/1:3,5:8:12.04:190,12,0	1/1:1,3:6:12.04:171,12,0	0/0:16,0:16:45.10:0,45,492	0/0:8,0:8:21.05:0,21,234	0/0:23,0:23:48.08:0,48,527	0/0:12,0:12:27.06:0,27,301	0/0:12,0:12:36.10:0,36,401	1/1:2,7:9:18.06:285,18,0	0/0:11,0:11:33.09:0,33,368	1/1:2,1:3:3.01:48,3,0	./.	1/1:5,0:5:11.99:120,12,0	0/0:11,0:11:29.87:0,30,313	0/0:8,0:8:15.04:0,15,167	0/0:18,0:18:48.11:0,48,534	0/0:12,0:12:36.10:0,36,401	1/1:2,0:4:5.98:57,6,0	1/1:8,0:8:5.99:57,6,0	1/1:2,0:2:3:29,3,0
chr10	85844389	.	GGTGT	G	1720.62	PASS	AB=0.904;AC=21;AF=0.404;AN=52;BaseQRankSum=4.551;DP=806;FS=13.217;HRun=0;HaplotypeScore=158.3820;InbreedingCoeff=0.3467;MQ=63.32;MQ0=26;MQRankSum=-3.039;QD=4.63;ReadPosRankSum=3.088;VQSLOD=1.8972;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:45:40.29:0,40,515	1/1:8,0:10:12.02:120,12,0	./.	./.	0/1:16,1:25:32.74:33,0,35	0/0:16,0:21:17.53:0,18,298	0/0:34,0:34:11.79:0,12,175	0/0:29,0:27:1.25:0,1,3	0/1:26,0:26:4.77:5,0,744	1/1:41,0:41:24.18:235,24,0	0/0:18,0:19:2.80:0,3,30	0/1:27,1:28:99:112,0,461	0/1:23,0:22:9.31:9,0,188	0/0:20,1:21:21.04:0,21,423	0/1:29,1:28:25.26:25,0,543	0/0:32,0:32:27.08:0,27,558	1/1:23,0:25:11.39:103,11,0	0/0:16,0:18:23.74:0,24,392	0/1:24,1:23:26.79:89,0,27	1/1:14,3:17:6.02:86,6,0	1/1:49,5:54:5.43:213,5,0	0/0:30,0:35:29.84:0,30,592	0/0:19,0:20:29.83:0,30,596	0/0:47,0:48:68.07:0,68,1411	0/0:21,0:22:29.84:0,30,562	1/1:25,3:27:24.07:353,24,0	0/1:13,9:23:31.06:459,0,31	1/1:12,0:12:5.50:55,6,0
chr10	85844480	.	C	CTG	8087.08	PASS	AB=0.711;AC=19;AF=0.339;AN=56;BaseQRankSum=4.529;DP=888;FS=2.297;HRun=0;HaplotypeScore=152.5262;InbreedingCoeff=0.6331;MQ=55.65;MQ0=20;MQRankSum=-1.263;QD=20.22;ReadPosRankSum=0.766;VQSLOD=5.3734;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:35:70.50:0,71,338	0/1:3,11:14:12.20:313,0,12	0/1:52,0:13:4.33:4,0,101	0/0:51,0:22:14.94:0,15,144	0/0:22,0:22:42.09:0,42,480	0/0:19,0:20:53.99:0,54,629	0/0:10,0:36:46.92:0,47,226	1/1:16,15:30:42.10:616,42,0	0/0:35,0:39:78.77:0,79,896	1/1:7,34:40:46.02:1374,46,0	1/1:3,11:14:27.09:434,27,0	0/0:35,0:36:99:0,102,1169	0/0:30,0:30:68.93:0,69,855	0/0:27,0:27:66.12:0,66,776	0/0:35,0:36:87.04:0,87,994	0/0:26,0:27:72:0,72,817	0/1:21,1:39:6.15:573,0,6	0/0:27,0:27:37.72:0,38,637	0/1:8,10:16:16.52:401,0,17	1/1:8,18:27:29.82:482,30,0	1/1:20,60:78:51.01:1795,51,0	0/0:20,0:20:33.10:0,33,398	0/0:22,0:24:41.95:0,42,474	0/0:40,0:40:89.92:0,90,1035	0/0:14,0:15:29.92:0,30,332	1/1:17,28:47:90.27:1350,90,0	1/1:8,11:18:8.95:585,9,0	0/1:7,6:13:21.13:160,0,21
chr10	85844879	.	CTG	C	2540.81	PASS	AB=0.899;AC=13;AF=0.232;AN=56;BaseQRankSum=5.527;DP=964;FS=9.698;HRun=0;HaplotypeScore=172.7237;InbreedingCoeff=0.4464;MQ=51.58;MQ0=37;MQRankSum=-5.061;QD=8.47;ReadPosRankSum=-1.477;VQSLOD=2.3091;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,108,1721	0/1:18,0:17:0.38:0,0,10	0/0:72,0:20:12.20:0,12,439	0/0:75,1:17:30.68:0,31,387	0/0:30,0:28:60.19:0,60,952	0/0:19,0:19:42.14:0,42,681	0/0:38,0:37:87.27:0,87,1415	1/1:37,8:38:1.24:638,1,0	0/0:19,0:18:45.10:0,45,642	0/1:32,7:39:24.38:616,0,24	0/1:16,4:18:2.32:69,0,2	0/0:36,0:36:96.30:0,96,1520	0/0:37,0:37:49.45:0,49,1335	0/0:20,0:20:45.15:0,45,730	0/0:41,0:41:86.79:0,87,1706	0/0:27,0:27:64.73:0,65,975	0/1:32,4:34:22.55:284,0,23	0/0:33,0:33:68.50:0,69,1256	0/1:19,2:19:37.80:218,0,38	0/0:21,1:21:3.63:0,4,14	1/1:36,36:70:29.11:337,29,0	0/0:41,0:40:84.14:0,84,1343	0/0:30,0:30:57.17:0,57,896	0/0:43,0:42:99:0,99,1528	0/0:23,0:23:51.17:0,51,825	1/1:29,6:33:12.63:515,13,0	1/1:12,0:10:5:19,5,0	0/0:6,0:13:3.16:0,3,30
chr10	85844886	.	T	TGTGTGA	4628.36	PASS	AB=0.791;AC=17;AF=0.304;AN=56;BaseQRankSum=11.533;DP=954;FS=3.615;HRun=0;HaplotypeScore=241.7410;InbreedingCoeff=0.7186;MQ=50.57;MQ0=28;MQRankSum=-7.929;QD=14.46;ReadPosRankSum=-3.769;VQSLOD=3.3412;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,117,2402	1/1:7,10:16:8.95:182,9,0	0/0:67,0:19:22.86:0,23,595	0/0:71,0:17:39.22:0,39,562	0/0:30,0:28:66.56:0,67,1287	0/0:20,0:20:47.77:0,48,954	0/0:34,0:34:92.95:0,93,1889	1/1:51,0:47:48.22:914,48,0	0/0:18,0:17:48.09:0,48,859	1/1:39,0:39:27.76:602,28,0	1/1:9,14:22:11.62:214,12,0	0/0:35,0:35:99:0,99,2056	0/0:34,0:34:93.29:0,93,1904	0/0:18,0:17:45.15:0,45,1014	0/0:41,0:41:99:0,114,2424	0/0:26,0:26:65.40:0,65,1264	0/1:34,1:33:10.70:528,0,11	0/0:31,0:31:84.24:0,84,1738	0/1:11,6:16:11.07:384,0,11	0/0:10,14:23:2.44:0,2,21	1/1:66,0:63:16.47:409,16,0	0/0:44,0:44:99:0,100,1931	0/0:29,0:29:60.12:0,60,1163	0/0:44,0:43:99:0,102,2001	0/0:22,0:22:50.34:0,50,1095	1/1:16,16:35:32.08:694,32,0	0/1:9,7:15:11.97:177,0,12	1/1:13,1:14:18.41:524,18,0
chr10	85844888	.	T	TGTGA	2839.11	PASS	AB=0.989;AC=15;AF=0.268;AN=56;BaseQRankSum=11.244;DP=938;FS=2.666;HRun=0;HaplotypeScore=204.9443;InbreedingCoeff=0.4833;MQ=50.65;MQ0=28;MQRankSum=-6.501;QD=9.01;ReadPosRankSum=-1.066;VQSLOD=2.5215;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,117,2040	1/1:17,1:16:8.75:102,9,0	0/0:65,0:18:29.38:0,29,561	0/0:67,0:17:33.50:0,34,524	0/0:31,0:29:66.37:0,66,1107	0/0:19,0:19:45.02:0,45,793	0/0:34,0:34:92.95:0,93,1637	0/1:51,0:47:99:419,0,153	0/0:19,0:18:48.09:0,48,740	1/1:20,15:39:5.55:505,6,0	1/1:23,0:21:14.39:149,14,0	0/0:35,0:35:99:0,99,1750	0/0:34,0:34:93.28:0,93,1630	0/0:18,0:17:48.15:0,48,857	0/0:40,0:40:99:0,114,2040	0/0:26,0:26:65.40:0,65,1092	0/1:32,1:32:23.33:395,0,23	0/0:31,0:31:83.64:0,84,1478	0/1:17,0:14:8.32:278,0,8	0/0:21,1:21:3.44:0,3,26	1/1:66,0:64:4.82:312,5,0	0/0:41,0:41:99:0,100,1664	0/0:29,0:29:60.02:0,60,1004	0/0:44,0:43:99:0,108,1766	0/0:23,0:23:54.14:0,54,957	0/1:35,0:33:7.41:473,0,7	0/1:17,0:15:25.57:62,0,26	1/1:13,1:13:16.07:318,16,0
chr10	85846640	.	ACTTCAAGTGTCATCGAGTGACG	A	473.69	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.886;DP=572;FS=5.882;HRun=0;HaplotypeScore=309.1590;InbreedingCoeff=0.9235;MQ=89.17;MQ0=0;MQRankSum=-2.984;QD=33.84;ReadPosRankSum=2.054;VQSLOD=1.0608;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.21:0,75,6017	0/0:7,0:7:21.07:0,21,2139	0/0:16,0:16:48.16:0,48,3087	0/0:28,0:29:84.29:0,84,6399	0/0:11,0:11:33.11:0,33,3412	0/0:13,0:13:39.13:0,39,3680	0/0:35,0:35:99:0,99,9589	0/0:21,0:21:60.20:0,60,4803	0/0:20,0:20:60.21:0,60,5912	0/0:16,0:16:48.16:0,48,3975	0/0:8,0:8:24.08:0,24,2373	0/0:23,0:23:66.23:0,66,5802	0/0:23,0:23:69.24:0,69,6219	0/0:25,0:25:75.26:0,75,7040	0/0:28,0:28:84.29:0,84,8017	0/0:35,0:35:99:0,105,9646	0/0:36,0:36:99:0,105,9784	1/1:5,9:14:9.03:557,9,0	0/0:20,0:20:54.18:0,54,3900	0/0:12,0:12:33.11:0,33,2824	0/0:44,0:44:99:0,132,12257	0/0:10,0:10:30.10:0,30,2192	0/0:11,0:11:33.11:0,33,2761	0/0:34,0:34:99:0,102,9156	0/0:10,0:10:30.10:0,30,3150	0/0:21,0:21:63.22:0,63,5722	0/0:19,0:19:57.20:0,57,5422	0/0:6,0:6:18.06:0,18,1684
chr10	85847737	.	CT	C	1871.29	PASS	AB=0.900;AC=9;AF=0.161;AN=56;BaseQRankSum=7.597;DP=509;FS=9.864;HRun=1;HaplotypeScore=55.1984;InbreedingCoeff=0.8369;MQ=79.86;MQ0=0;MQRankSum=-2.836;QD=22.82;ReadPosRankSum=1.619;VQSLOD=2.6983;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1498	1/1:0,2:2:6.02:75,6,0	0/0:11,0:11:33.08:0,33,468	0/0:17,0:17:48.15:0,48,714	0/0:12,0:12:36.11:0,36,538	0/0:20,0:20:51.16:0,51,772	0/0:17,0:17:51.14:0,51,745	0/0:23,0:23:69.18:0,69,1012	0/0:11,0:11:30.06:0,30,403	1/1:0,14:14:38.94:490,39,0	1/1:0,8:8:24.08:334,24,0	0/0:22,0:22:63.21:0,63,978	0/0:17,0:17:48.15:0,48,727	0/0:12,0:11:33.11:0,33,511	0/0:21,0:21:60.18:0,60,892	0/0:20,0:20:57.18:0,57,866	1/1:0,31:31:78.26:1084,78,0	0/0:28,0:28:78.27:0,78,1212	0/0:18,0:18:51.15:0,51,756	0/0:15,0:15:45.14:0,45,680	0/0:43,0:43:99:0,126,1879	0/0:11,0:11:33.11:0,33,513	0/0:11,0:11:33.08:0,33,468	0/0:28,0:28:81.28:0,81,1264	0/0:12,0:12:33.11:0,33,515	0/1:24,3:27:46.09:46,0,851	0/0:14,0:14:36.05:0,36,533	0/0:9,0:9:27.09:0,27,422
chr10	85848440	.	G	GC	1364.07	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.192;DP=616;FS=2.779;HRun=7;HaplotypeScore=61.2261;InbreedingCoeff=0.9941;MQ=82.31;MQ0=0;MQRankSum=-3.112;QD=27.84;ReadPosRankSum=-1.102;VQSLOD=4.0185;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:66.20:797,66,0	0/0:8,0:8:21.03:0,21,203	0/0:26,0:26:37.96:0,38,465	0/0:18,0:17:18.57:0,19,280	0/0:25,0:25:75.12:0,75,724	0/0:17,0:17:48.08:0,48,463	1/1:2,21:23:57.17:688,57,0	0/0:30,0:30:75.10:0,75,720	0/0:20,0:20:56.99:0,57,537	0/0:30,0:30:81.13:0,81,782	0/0:15,0:15:45.07:0,45,434	0/0:26,0:26:72.11:0,72,695	0/0:16,0:16:48.08:0,48,463	0/0:19,0:19:54.07:0,54,516	0/0:19,0:19:54.08:0,54,521	0/0:27,0:27:75.12:0,75,724	0/0:39,0:39:99:0,108,1037	0/0:22,0:22:63.10:0,63,608	0/0:19,0:19:57.08:0,57,546	0/0:27,0:27:75.12:0,75,724	0/0:31,0:31:87.11:0,87,828	0/0:19,0:19:48.06:0,48,459	0/0:17,0:17:42.06:0,42,405	0/0:20,0:20:54.05:0,54,510	0/0:23,0:23:60.09:0,60,579	0/0:19,0:19:48.07:0,48,464	0/0:21,0:21:57.09:0,57,550	0/0:14,0:14:42.07:0,42,406
chr10	85848660	.	AATGT	A	3054.58	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.494;DP=678;FS=12.286;HRun=0;HaplotypeScore=134.9830;InbreedingCoeff=0.9912;MQ=83.84;MQ0=0;MQRankSum=-6.272;QD=50.91;ReadPosRankSum=1.163;VQSLOD=3.9600;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,151,4270	1/1:0,6:6:11.97:207,12,0	0/0:18,0:18:51.17:0,51,1350	0/0:25,0:25:66.18:0,66,1693	0/0:21,0:20:60.20:0,60,1658	0/0:16,0:16:48.16:0,48,1368	0/0:30,0:30:90.31:0,90,2573	0/0:30,0:29:87.30:0,87,2465	0/0:20,0:20:60.21:0,60,1739	1/1:0,21:21:63.22:1317,63,0	1/1:0,14:14:33.11:685,33,0	0/0:33,0:33:99:0,99,2781	0/0:25,0:25:75.24:0,75,2078	0/0:27,0:27:81.28:0,81,2240	0/0:26,0:25:78.27:0,78,2169	0/0:21,0:21:63.22:0,63,1777	1/1:0,19:19:48.16:1004,48,0	0/0:25,0:25:75.26:0,75,2089	0/0:20,0:20:60.21:0,60,1669	0/0:15,0:15:45.15:0,45,1284	0/0:62,0:62:99:0,184,5145	0/0:16,0:16:48.16:0,48,1365	0/0:27,0:27:81.23:0,81,2275	0/0:23,0:23:69.24:0,69,1990	0/0:16,0:16:48.12:0,48,1324	0/0:23,0:23:69.24:0,69,1983	0/0:23,0:23:69.24:0,69,1845	0/0:25,0:25:72.25:0,72,2003
chr10	85848796	.	C	CT	7451.32	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-10.900;DP=620;FS=13.532;HRun=3;HaplotypeScore=67.5355;InbreedingCoeff=0.9977;MQ=73.71;MQ0=0;MQRankSum=-1.531;QD=34.50;ReadPosRankSum=-1.790;VQSLOD=3.4306;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,1394	1/1:0,10:10:27.04:355,27,0	0/0:24,0:21:47:0,47,496	0/0:22,0:20:17.41:0,17,311	0/0:18,0:18:48.13:0,48,563	0/0:28,0:29:76.78:0,77,903	0/0:26,0:26:66.14:0,66,744	1/1:2,21:23:54.10:665,54,0	0/0:16,0:16:48.10:0,48,549	1/1:1,14:15:42.14:584,42,0	1/1:0,15:15:30.10:419,30,0	0/0:31,0:31:93.25:0,93,1091	0/0:25,0:25:72.22:0,72,863	0/0:28,0:28:78.24:0,78,935	0/0:32,0:32:77.62:0,78,938	0/0:23,0:23:69.21:0,69,828	1/1:2,20:22:59.41:804,59,0	0/0:21,0:21:60.14:0,60,701	1/1:1,23:24:69.22:946,69,0	1/1:1,19:20:57.19:789,57,0	1/1:3,24:27:66.21:908,66,0	0/0:12,0:12:33.10:0,33,396	0/0:13,0:13:30.09:0,30,359	0/0:26,0:26:78.24:0,78,932	0/0:15,0:15:45.14:0,45,540	1/1:1,18:19:50.76:680,51,0	1/1:1,27:28:72.24:1008,72,0	1/1:1,11:12:21.07:294,21,0
chr10	85849200	.	A	AAAAAG	3859.82	PASS	AB=0.751;AC=25;AF=0.446;AN=56;BaseQRankSum=3.469;DP=523;FS=5.271;HRun=0;HaplotypeScore=118.4132;InbreedingCoeff=0.7069;MQ=44.96;MQ0=16;MQRankSum=-5.752;QD=13.79;ReadPosRankSum=-2.931;VQSLOD=1.7356;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,13:32:19.50:509,19,0	1/1:3,0:9:6.91:290,7,0	0/0:6,0:5:11.79:0,12,91	0/0:6,0:1:3:0,3,26	0/0:30,0:30:32.31:0,32,636	0/0:21,0:21:46.57:0,47,593	0/1:7,7:14:21.40:84,0,21	1/1:36,0:35:58.21:405,58,0	0/0:14,0:14:32.83:0,33,377	1/1:6,0:22:23:477,23,0	1/1:2,0:18:26.90:474,27,0	0/0:29,0:27:59.38:0,59,644	0/0:12,0:10:17.38:0,17,225	0/0:9,0:9:19.56:0,20,182	0/0:23,0:22:42.99:0,43,442	0/0:16,0:16:36.79:0,37,452	0/1:11,0:31:32.11:375,0,32	0/1:16,0:14:34.64:35,0,35	1/1:22,0:21:29.34:351,29,0	1/1:17,0:17:26.02:156,26,0	1/1:9,0:7:16.36:151,16,0	0/0:15,0:14:38.74:0,39,399	0/0:20,0:19:31.58:0,32,376	0/0:26,0:25:40.57:0,41,752	0/0:15,0:14:20.40:0,20,240	1/1:15,0:14:1.91:187,2,0	1/1:22,0:21:32.28:228,32,0	1/1:12,0:11:17.53:137,18,0
chr10	85849825	.	C	CG	908.24	PASS	AB=1.000;AC=13;AF=0.260;AN=50;BaseQRankSum=-2.941;DP=398;FS=2.960;HRun=1;HaplotypeScore=64.6659;InbreedingCoeff=0.8219;MQ=40.17;MQ0=20;MQRankSum=-2.109;QD=8.65;ReadPosRankSum=0.198;VQSLOD=1.0576;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:15:29.39:0,29,178	./.	./.	./.	0/0:17,0:17:26.63:0,27,178	0/0:9,0:9:20.70:0,21,134	0/0:13,0:11:29.52:0,30,189	1/1:15,0:15:35.47:249,35,0	0/0:13,0:13:29.56:0,30,192	0/0:21,0:19:25.60:0,26,163	0/0:6,0:9:10.41:0,10,59	0/0:15,0:15:26.61:0,27,180	0/0:17,0:16:32.79:0,33,197	0/0:14,0:14:23.57:0,24,151	0/0:22,0:21:47.16:0,47,300	0/0:12,0:11:23.67:0,24,159	0/0:28,0:24:36.91:0,37,259	0/0:16,0:15:29.77:0,30,221	1/1:19,0:16:12.84:209,13,0	1/1:5,8:13:2.99:35,3,0	0/1:7,0:5:10.98:36,0,11	0/0:13,0:12:20.68:0,21,135	0/0:8,0:8:17.67:0,18,111	0/0:17,0:15:14.72:0,15,96	0/0:15,0:15:32.39:0,32,202	1/1:17,0:16:7.86:178,8,0	1/1:23,0:22:29.17:287,29,0	1/1:11,0:8:11.91:85,12,0
chr10	85850204	.	AGT	A	2394.05	PASS	AB=0.886;AC=20;AF=0.357;AN=56;BaseQRankSum=7.462;DP=854;FS=0.420;HRun=0;HaplotypeScore=115.6073;InbreedingCoeff=0.2543;MQ=59.76;MQ0=12;MQRankSum=-0.864;QD=5.59;ReadPosRankSum=1.043;VQSLOD=3.1962;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:33:19.83:0,20,705	0/0:5,0:13:11.87:0,12,93	0/1:34,1:12:9.87:32,0,10	0/0:40,0:15:15.47:0,15,162	0/0:26,0:26:32.81:0,33,479	0/0:23,2:26:10.31:0,10,545	0/1:33,2:34:8.63:9,0,715	1/1:20,6:26:13.53:143,14,0	0/1:41,2:45:35.64:36,0,959	0/0:18,0:29:43.46:0,43,405	0/0:12,0:16:10.88:0,11,72	0/0:39,3:42:15.39:0,15,1052	0/0:40,3:44:23.77:0,24,914	0/1:29,4:33:8.45:8,0,772	0/0:51,2:53:71.02:0,71,1490	0/0:35,3:38:6.60:0,7,975	0/0:9,0:24:37.82:0,38,326	0/1:12,1:24:4.31:4,0,240	1/1:11,7:17:20.91:219,21,0	1/1:5,5:11:14.79:136,15,0	1/1:34,54:90:89.04:1192,89,0	0/1:18,1:19:10.24:10,0,299	0/1:12,2:14:16.30:16,0,183	0/0:40,1:41:43.90:0,44,1050	0/1:13,1:13:16.26:16,0,193	0/1:24,9:34:21.08:213,0,21	1/1:6,14:20:35.93:390,36,0	0/1:4,5:9:5.84:154,0,6
chr10	85850415	.	TAC	T	400.46	PASS	AB=0.955;AC=17;AF=0.354;AN=48;BaseQRankSum=2.063;DP=786;FS=3.803;HRun=0;HaplotypeScore=106.5758;InbreedingCoeff=-0.1975;MQ=47.64;MQ0=60;MQRankSum=-0.401;QD=0.95;ReadPosRankSum=-0.938;VQSLOD=1.2089;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:44:4.72:0,5,18	./.	./.	./.	0/0:20,0:19:5.14:0,5,24	0/0:23,0:22:4:0,4,187	0/0:38,0:29:0.47:0,0,1	./.	0/0:20,0:19:7.25:0,7,200	0/1:26,1:28:30.43:37,0,30	0/0:15,0:13:6.02:0,6,65	0/1:35,1:35:89.42:89,0,170	0/1:18,0:18:8.91:9,0,162	0/1:21,0:22:20.12:20,0,63	0/1:24,1:25:21.66:22,0,158	0/1:32,1:32:52.76:53,0,182	0/1:37,0:35:49.16:49,0,278	0/1:20,1:20:16.48:16,0,226	0/0:13,0:9:3.01:0,3,41	1/1:18,1:16:2.80:32,3,0	0/1:56,8:59:49.39:49,0,85	1/1:26,0:24:6.02:64,6,0	1/1:10,0:9:3.01:32,3,0	0/1:42,0:42:61.89:62,0,351	0/0:14,0:14:5.83:0,6,109	0/1:35,0:27:0.44:0,0,35	0/0:21,0:19:15.05:0,15,184	0/0:5,0:5:3.01:0,3,40
chr10	85850996	.	GAAGAC	G	975.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.982;DP=742;FS=0.933;HRun=0;HaplotypeScore=157.6135;InbreedingCoeff=0.9957;MQ=83.78;MQ0=0;MQRankSum=-1.075;QD=42.42;ReadPosRankSum=1.512;VQSLOD=3.2832;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,169,5133	0/0:7,0:7:21.07:0,21,651	0/0:22,0:22:54.19:0,54,1572	0/0:27,0:27:72.70:0,73,2016	0/0:20,0:20:54.18:0,54,1570	0/0:21,0:20:60.21:0,60,1843	0/0:28,0:28:81.28:0,81,2448	0/0:38,0:38:99:0,111,3372	0/0:26,0:26:75.26:0,75,2309	0/0:28,0:28:81.28:0,81,2381	0/0:18,0:18:51.13:0,51,1507	0/0:28,0:28:78.25:0,78,2252	0/0:33,0:33:99:0,99,2987	0/0:26,0:26:75.26:0,75,2317	0/0:33,0:33:93.32:0,93,2796	0/0:25,0:25:66.22:0,66,1943	0/0:37,0:37:96.33:0,96,2938	1/1:3,20:23:51.18:1070,51,0	0/0:17,0:17:42.13:0,42,1120	0/0:23,0:23:60.19:0,60,1768	0/0:50,0:50:99:0,138,4233	0/0:15,0:15:45.15:0,45,1335	0/0:16,0:16:45.15:0,45,1326	0/0:26,0:26:75.26:0,75,2288	0/0:26,0:26:72.22:0,72,2069	0/0:35,0:35:99:0,102,2940	0/0:21,0:21:63.20:0,63,1831	0/0:12,0:12:33.11:0,33,988
chr10	85853848	.	GCT	G	4384.96	PASS	AB=0.515;AC=7;AF=0.125;AN=56;BaseQRankSum=10.903;DP=800;FS=4.609;HRun=0;HaplotypeScore=107.7952;InbreedingCoeff=0.8495;MQ=83.71;MQ0=0;MQRankSum=-2.836;QD=38.80;ReadPosRankSum=1.830;VQSLOD=6.6654;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,2056	0/1:1,16:17:11.05:573,0,11	0/0:26,0:27:52.37:0,52,1215	0/0:29,0:29:27.22:0,27,1113	0/0:34,0:34:99:0,102,1861	0/0:20,0:20:57.18:0,57,1036	0/0:27,0:27:81.28:0,81,1517	0/0:32,0:32:90.31:0,90,1683	0/0:24,0:24:72.23:0,72,1295	1/1:0,34:34:99:1435,99,0	1/1:1,24:25:69.23:1008,69,0	0/0:30,0:30:87.28:0,87,1599	0/0:24,0:24:69.24:0,69,1292	0/0:30,0:30:90.29:0,90,1654	0/0:38,0:38:99:0,114,2128	0/0:35,0:35:99:0,102,1879	1/1:2,35:37:93.31:1369,93,0	0/0:39,0:39:99:0,114,2128	0/0:20,0:20:51.17:0,51,952	0/0:33,0:33:99:0,99,1846	0/0:38,0:38:99:0,108,1963	0/0:30,0:30:87.28:0,87,1582	0/0:19,0:19:57.20:0,57,1038	0/0:35,0:35:99:0,105,1936	0/0:26,0:25:78.27:0,78,1454	0/0:18,0:18:54.18:0,54,983	0/0:30,0:30:87.30:0,87,1629	0/0:10,0:10:30.10:0,30,540
chr10	85855236	.	AG	A	994.45	PASS	AB=0.891;AC=25;AF=0.446;AN=56;BaseQRankSum=4.127;DP=350;FS=13.576;HRun=12;HaplotypeScore=61.2011;InbreedingCoeff=0.1753;MQ=66.76;MQ0=0;MQRankSum=-1.534;QD=4.46;ReadPosRankSum=4.312;VQSLOD=0.2311;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,1:19:21.03:0,21,204	0/0:8,0:8:8.97:0,9,70	0/0:9,0:8:15.36:0,15,108	0/1:10,0:7:13.45:13,0,16	0/1:13,1:15:19.58:20,0,44	0/0:8,0:8:11.98:0,12,111	0/1:18,2:20:4.37:4,0,308	1/1:3,1:4:2.98:23,3,0	0/1:10,2:12:22.45:22,0,145	0/0:12,0:12:6.93:0,7,31	0/0:8,0:10:17.65:0,18,125	0/1:10,1:11:5.17:5,0,123	0/0:9,1:10:12:0,12,109	0/1:6,0:6:6:6,0,92	0/1:9,2:11:21.64:37,0,22	0/1:16,2:18:33.61:34,0,238	0/0:12,0:22:8.82:0,9,76	1/1:3,7:12:27.98:197,28,0	0/1:8,2:11:38.83:57,0,39	1/1:4,3:10:14.85:87,15,0	1/1:4,6:12:21.05:133,21,0	0/0:17,1:18:12.79:0,13,286	0/0:10,1:11:12:0,12,109	0/1:20,5:25:46.87:47,0,291	0/1:11,2:13:22.25:22,0,142	1/1:1,5:6:14.95:118,15,0	1/1:5,13:22:40.98:279,41,0	1/1:2,2:5:10.99:75,11,0
chr10	85856190	.	CA	C	4433.62	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.208;DP=528;FS=0.000;HRun=3;HaplotypeScore=51.9232;InbreedingCoeff=0.9761;MQ=82.23;MQ0=2;MQRankSum=-0.763;QD=33.34;ReadPosRankSum=-1.002;VQSLOD=4.4617;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.21:0,63,907	0/0:6,0:6:18.04:0,18,225	0/0:16,0:16:38.99:0,39,552	0/0:14,0:14:36.12:0,36,512	0/0:11,0:11:30.07:0,30,414	0/0:17,0:17:48.16:0,48,691	0/0:40,0:40:99:0,111,1562	1/1:0,18:18:51.14:619,51,0	0/0:24,0:24:69.21:0,69,975	0/0:9,0:9:27.09:0,27,379	0/0:8,0:8:21.07:0,21,302	0/0:25,0:25:75.24:0,75,1063	0/0:20,0:20:57.19:0,57,821	0/0:24,0:24:72.23:0,72,1020	0/0:16,0:16:48.13:0,48,640	0/0:18,0:18:54.16:0,54,759	0/0:34,0:34:99:0,99,1406	0/0:33,0:33:96.27:0,96,1341	1/1:2,15:17:45.13:548,45,0	1/1:1,5:6:15.05:186,15,0	1/1:3,40:41:99:1413,114,0	0/0:4,0:4:9.03:0,9,130	0/0:6,0:6:13.29:0,13,176	0/0:35,0:35:99:0,105,1511	0/0:14,0:13:42.14:0,42,605	1/1:1,18:19:13.96:626,14,0	1/1:1,17:18:48.15:595,48,0	1/1:0,12:12:36.11:446,36,0
chr10	85857173	.	G	GCCC	7581.23	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.172;DP=536;FS=1.230;HRun=3;HaplotypeScore=138.4154;InbreedingCoeff=0.9904;MQ=78.17;MQ0=0;MQRankSum=-14.162;QD=49.55;ReadPosRankSum=-4.462;VQSLOD=3.0564;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.33:0,96,1528	0/0:9,0:9:20.72:0,21,318	0/0:16,0:16:34.68:0,35,478	0/0:16,0:16:17.06:0,17,494	0/0:10,0:10:24.08:0,24,383	0/0:14,0:14:39.12:0,39,600	0/0:31,0:31:87.28:0,87,1365	1/1:7,25:32:84.27:1756,84,0	0/0:15,0:15:42.14:0,42,672	0/0:14,0:14:42.13:0,42,650	0/0:6,0:6:12.04:0,12,192	0/0:25,0:25:72.21:0,72,1099	0/0:15,0:15:42.14:0,42,668	0/0:22,0:22:63.19:0,63,961	0/0:19,0:19:48.13:0,48,721	0/0:16,0:16:48.16:0,48,768	0/0:28,0:28:78.24:0,78,1201	0/0:30,0:30:87.27:0,87,1355	1/1:7,11:19:51.09:970,51,0	1/1:8,11:19:42.08:829,42,0	1/1:13,18:32:49.68:1034,50,0	0/0:11,0:11:30.08:0,30,431	0/0:10,0:10:30.10:0,30,479	0/0:21,0:21:63.21:0,63,1003	0/0:19,0:19:54.17:0,54,840	1/1:9,13:22:54.13:1104,54,0	1/1:4,17:21:63.22:1413,63,0	1/1:2,6:8:21.07:475,21,0
chr10	85857206	.	G	GT	3839.16	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.885;DP=608;FS=1.283;HRun=2;HaplotypeScore=135.6613;InbreedingCoeff=0.9528;MQ=82.01;MQ0=0;MQRankSum=-12.797;QD=25.94;ReadPosRankSum=-0.743;VQSLOD=3.2155;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:58.37:0,58,221	0/0:10,0:10:0.38:0,0,10	0/0:19,0:19:47.61:0,48,551	0/0:32,0:32:75.23:0,75,926	0/0:20,0:20:60.19:0,60,742	0/0:13,0:13:39.12:0,39,483	0/0:34,0:34:54.83:0,55,219	1/1:6,13:19:42.14:543,42,0	0/0:18,0:18:51.16:0,51,630	0/0:25,0:25:58.65:0,59,231	0/0:10,0:10:13.05:0,13,38	0/0:27,0:27:75.22:0,75,916	0/0:14,0:14:42.13:0,42,519	0/0:24,0:24:72.23:0,72,891	0/0:22,0:21:63.20:0,63,780	0/0:17,0:17:51.16:0,51,631	0/0:30,0:30:53.85:0,54,208	0/0:32,0:32:87.27:0,87,1078	1/1:11,11:22:31.44:475,31,0	1/1:0,17:17:45.14:580,45,0	1/1:9,31:40:58.82:652,59,0	0/0:11,0:11:33.10:0,33,409	0/0:13,0:13:39.11:0,39,471	0/0:26,0:26:75.22:0,75,915	0/0:19,0:19:57.18:0,57,705	1/1:4,21:25:66.17:840,66,0	1/1:6,11:17:39.47:481,39,0	1/1:1,7:8:21.07:269,21,0
chr10	85857209	.	C	CG	9193.08	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=16.194;DP=611;FS=1.024;HRun=4;HaplotypeScore=110.0788;InbreedingCoeff=0.9990;MQ=80.17;MQ0=0;MQRankSum=-7.454;QD=30.44;ReadPosRankSum=-0.484;VQSLOD=3.9230;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,44:47:99:1559,115,0	1/1:0,9:10:27.09:369,27,0	0/0:18,0:18:32.80:0,33,450	0/0:31,0:32:72.17:0,72,794	0/0:22,0:22:60.15:0,60,671	0/0:13,0:13:39.11:0,39,442	1/1:2,31:33:87.29:1189,87,0	1/1:17,0:17:41.35:509,41,0	0/0:18,0:18:45.13:0,45,509	1/1:4,25:29:72.20:948,72,0	1/1:0,10:10:30.10:408,30,0	0/0:24,0:24:69.20:0,69,781	0/0:15,0:15:39.11:0,39,441	0/0:24,0:24:69.20:0,69,782	0/0:23,0:22:63.18:0,63,714	0/0:17,0:17:45.13:0,45,510	1/1:3,29:32:78.26:1067,78,0	0/0:30,0:30:84.24:0,84,953	1/1:20,0:20:29.55:369,30,0	1/1:17,0:17:46.03:584,46,0	1/1:40,0:40:54.15:645,54,0	0/0:11,0:11:33.09:0,33,372	0/0:15,0:15:39.11:0,39,442	0/0:26,0:26:72.21:0,72,816	0/0:20,0:20:54.15:0,54,612	1/1:24,0:24:63.20:809,63,0	1/1:15,0:15:33.70:465,34,0	1/1:8,0:8:21.07:273,21,0
chr10	85862790	.	CTAAATAAATAAATAAA	C	2315.80	PASS	AC=10;AF=0.227;AN=44;BaseQRankSum=6.753;DP=357;FS=6.497;HRun=0;HaplotypeScore=149.5853;InbreedingCoeff=0.7641;MQ=64.52;MQ0=3;MQRankSum=-5.854;QD=30.47;ReadPosRankSum=1.833;VQSLOD=2.3232;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,7:20:18.06:754,18,0	1/1:5,2:7:6.02:263,6,0	./.	./.	0/0:8,0:11:9.03:0,9,629	0/0:20,0:20:48.16:0,48,3277	./.	0/0:40,0:39:51.18:0,51,2988	./.	1/1:9,5:14:15.05:569,15,0	1/1:6,4:10:9.03:356,9,0	0/0:13,0:13:18.06:0,18,1242	0/0:10,0:10:3.01:0,3,228	0/0:12,0:12:15.05:0,15,1097	0/0:12,0:12:21.07:0,21,1574	0/0:14,0:14:6.02:0,6,394	1/1:17,8:25:7.32:520,7,0	0/0:25,0:25:54.14:0,54,3668	0/0:12,0:11:15.05:0,15,842	./.	0/0:12,0:12:6.02:0,6,233	0/0:4,0:4:6.02:0,6,390	0/0:6,0:6:6.02:0,6,455	./.	0/0:8,0:8:12.04:0,12,910	0/0:14,0:14:24.08:0,24,1613	0/0:11,0:11:15.05:0,15,1139	0/0:15,0:15:30.10:0,30,2276
chr10	85863775	.	CA	C	3516.46	PASS	AB=0.944;AC=12;AF=0.214;AN=56;BaseQRankSum=4.878;DP=488;FS=3.214;HRun=1;HaplotypeScore=61.2308;InbreedingCoeff=0.7510;MQ=79.61;MQ0=0;MQRankSum=-2.097;QD=23.92;ReadPosRankSum=-0.366;VQSLOD=3.4909;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,2:34:37.46:347,0,37	1/1:1,5:6:11.95:142,12,0	0/0:14,0:14:41.99:0,42,455	0/0:18,0:17:43.43:0,43,475	0/0:14,0:14:37.54:0,38,528	0/0:19,0:19:57.06:0,57,692	0/1:16,1:17:16.85:116,0,17	0/0:13,0:13:32.95:0,33,314	0/0:21,1:22:38.95:0,39,789	1/1:1,17:18:45.13:598,45,0	1/1:6,6:12:26.88:363,27,0	0/0:25,0:25:50.05:0,50,915	0/0:15,0:15:42.14:0,42,580	0/0:15,0:15:42.09:0,42,516	0/0:31,0:31:93.20:0,93,1170	0/0:13,0:13:39.10:0,39,497	1/1:2,26:28:57.01:726,57,0	1/1:0,32:32:90.23:1224,90,0	0/0:9,0:9:23.93:0,24,212	0/0:8,0:8:15.59:0,16,132	0/0:17,0:17:17.91:0,18,136	0/0:22,0:22:57.07:0,57,688	0/0:13,0:13:29.63:0,30,371	0/0:28,0:28:84.09:0,84,1019	0/0:15,0:15:45.10:0,45,542	0/0:13,0:13:38.75:0,39,301	0/0:16,0:16:21.39:0,21,176	0/0:1,0:1:2.22:0,2,7
chr10	85866733	.	A	AT	14210.28	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-3.411;DP=686;FS=1.932;HRun=2;HaplotypeScore=70.7014;InbreedingCoeff=0.9994;MQ=76.59;MQ0=0;MQRankSum=-3.453;QD=41.67;ReadPosRankSum=1.116;VQSLOD=4.8770;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:96.33:1439,96,0	1/1:0,10:10:24:360,24,0	0/0:30,0:31:74.63:0,75,989	0/0:14,0:14:39.11:0,39,487	0/0:34,0:34:99:0,99,1254	0/0:34,0:34:96.31:0,96,1245	1/1:2,16:18:24.30:643,24,0	1/1:1,29:30:87.28:1284,87,0	0/0:23,0:23:66.20:0,66,842	1/1:0,33:33:99:1460,99,0	1/1:0,20:20:57.15:828,57,0	0/0:18,0:18:54.16:0,54,676	0/0:26,0:26:78.25:0,78,1011	0/0:18,0:18:54.18:0,54,700	0/0:31,0:31:93.30:0,93,1207	0/0:29,0:29:87.27:0,87,1116	1/1:0,28:28:78.26:1169,78,0	1/1:0,26:26:75.25:1123,75,0	1/1:0,20:20:60.20:892,60,0	1/1:0,21:21:63.14:895,63,0	1/1:1,15:16:36.12:540,36,0	0/0:17,0:17:51.17:0,51,661	0/0:19,0:19:57.15:0,57,709	0/0:27,0:27:81.26:0,81,1050	0/0:24,0:24:72.21:0,72,917	1/1:0,32:32:96.29:1377,96,0	1/1:1,35:36:99:1572,105,0	1/1:0,16:16:42.14:629,42,0
chr10	85866826	.	GAA	G	4309.94	PASS	AB=0.545;AC=16;AF=0.286;AN=56;BaseQRankSum=-2.329;DP=796;FS=2.328;HRun=13;HaplotypeScore=125.4245;InbreedingCoeff=0.7834;MQ=69.65;MQ0=9;MQRankSum=-0.143;QD=19.50;ReadPosRankSum=0.540;VQSLOD=3.7770;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,2:33:3.14:0,3,223	0/1:2,1:10:30.47:32,0,30	0/0:65,0:27:29.63:0,30,413	0/0:65,0:32:38.76:0,39,421	0/0:37,0:39:99:0,101,1346	0/0:16,0:16:42.12:0,42,572	0/0:7,0:28:31.62:0,32,164	1/1:4,24:29:65.71:665,66,0	0/0:19,0:20:56.68:0,57,787	0/0:5,1:29:27.38:0,27,190	0/1:3,2:23:3.72:4,0,164	0/0:26,0:29:79.73:0,80,1065	0/0:20,0:20:47.52:0,48,659	0/0:12,1:16:0.57:0,1,404	0/0:17,1:22:36.08:0,36,782	0/0:25,0:26:59.66:0,60,798	0/0:12,0:35:74.23:0,74,335	0/0:9,0:27:62.99:0,63,584	1/1:10,15:25:53.62:553,54,0	1/1:6,20:27:71.83:678,72,0	1/1:1,14:16:26.97:312,27,0	0/0:26,0:26:68.71:0,69,947	0/0:28,1:32:60.16:0,60,1135	0/0:19,1:20:24.91:0,25,673	0/0:18,0:22:44.11:0,44,563	1/1:11,24:37:92.58:857,93,0	1/1:7,35:43:99:1042,111,0	1/1:4,4:9:17.99:167,18,0
chr10	85873842	.	GT	G	2453.19	PASS	AB=0.959;AC=15;AF=0.268;AN=56;BaseQRankSum=4.114;DP=610;FS=2.851;HRun=10;HaplotypeScore=88.1277;InbreedingCoeff=0.8069;MQ=71.40;MQ0=8;MQRankSum=2.715;QD=13.26;ReadPosRankSum=1.726;VQSLOD=3.9250;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:12.94:0,13,159	0/0:3,0:3:0.47:0,0,2	0/0:49,3:26:0.86:0,1,229	0/1:45,1:11:5.92:6,0,80	0/0:32,0:32:40.97:0,41,832	0/0:23,0:23:60.15:0,60,656	0/0:15,0:16:20.39:0,20,145	1/1:12,15:27:13.24:331,13,0	0/0:22,0:22:59.75:0,60,640	0/0:18,0:18:10.21:0,10,131	0/0:20,0:20:23.81:0,24,151	0/0:19,0:19:56.99:0,57,612	0/0:33,0:33:84.15:0,84,894	0/0:24,0:24:66.04:0,66,688	0/0:23,0:23:62.84:0,63,673	0/0:23,0:23:63.13:0,63,684	0/0:12,0:12:20.43:0,20,128	0/0:8,0:10:20.11:0,20,112	1/1:3,21:23:62.96:539,63,0	1/1:2,17:19:41.56:349,42,0	1/1:3,6:9:14.99:130,15,0	0/0:19,1:20:31.08:0,31,552	0/0:17,0:17:48.12:0,48,522	0/0:13,0:15:41.78:0,42,427	0/0:17,2:19:2.03:0,2,472	1/1:2,18:20:53.98:468,54,0	1/1:5,28:33:82.17:690,82,0	1/1:0,5:5:15:130,15,0
chr10	85873899	.	GA	G	2203.21	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.300;DP=530;FS=5.159;HRun=10;HaplotypeScore=70.2320;InbreedingCoeff=0.9889;MQ=69.17;MQ0=0;MQRankSum=-2.099;QD=20.98;ReadPosRankSum=0.487;VQSLOD=4.6802;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:80.98:703,81,0	1/1:0,7:7:21:182,21,0	0/0:8,0:11:15.61:0,16,115	0/0:7,0:7:14.74:0,15,117	0/0:23,0:23:63.17:0,63,695	0/0:17,1:19:18.89:0,19,412	1/1:1,8:10:20.03:162,20,0	0/0:31,2:33:35.09:0,35,821	0/0:19,0:19:42.10:0,42,457	1/1:1,21:22:65.98:572,66,0	1/1:1,16:17:41.98:365,42,0	0/0:21,0:21:57.13:0,57,613	0/0:36,0:36:99:0,99,1084	0/0:16,0:18:47.96:0,48,512	0/0:27,0:27:72.19:0,72,796	0/0:28,0:28:78.17:0,78,849	1/1:2,6:8:18:156,18,0	1/1:0,12:12:29.99:260,30,0	0/0:21,0:21:54.15:0,54,596	0/0:23,0:23:66.13:0,66,709	0/0:13,0:13:38.93:0,39,405	0/0:15,0:15:33.09:0,33,365	0/0:14,0:14:36.08:0,36,384	0/0:13,0:13:36.10:0,36,398	0/0:17,1:18:28.09:0,28,538	0/0:22,0:22:54.14:0,54,591	0/0:37,0:37:99:0,99,1073	0/0:7,0:7:21.06:0,21,232
chr10	85875589	.	GA	G	394.79	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.556;DP=657;FS=3.514;HRun=7;HaplotypeScore=61.2548;InbreedingCoeff=0.9957;MQ=69.92;MQ0=0;MQRankSum=-1.939;QD=20.78;ReadPosRankSum=1.433;VQSLOD=3.3861;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,1570	0/0:10,0:10:30.09:0,30,365	0/0:10,0:10:27.08:0,27,316	0/0:12,1:12:30.08:0,30,345	0/0:28,0:28:78.24:0,78,969	0/0:16,0:16:48.15:0,48,604	0/0:23,0:23:63.20:0,63,792	0/0:33,0:33:80.72:0,81,1008	0/0:18,0:18:54.17:0,54,679	0/0:46,0:46:99:0,129,1619	0/0:29,0:29:81.25:0,81,1006	0/0:22,0:22:66.21:0,66,830	0/0:20,0:20:57.15:0,57,687	0/0:26,0:26:75.23:0,75,928	0/0:23,0:22:69.21:0,69,855	0/0:20,0:20:60.19:0,60,755	0/0:35,0:35:90.28:0,90,1119	1/1:2,17:19:48.11:490,48,0	0/0:28,0:27:75.21:0,75,917	0/0:28,0:28:81.26:0,81,1019	0/0:21,0:21:51.16:0,51,641	0/0:14,0:14:36.12:0,36,453	0/0:16,0:16:45.14:0,45,564	0/0:14,0:14:39.12:0,39,491	0/0:32,0:32:87.27:0,87,1082	0/0:23,0:23:69.21:0,69,857	0/0:37,0:37:99:0,105,1303	0/0:8,0:8:24.08:0,24,302
chr10	85876897	.	G	GT	1205.14	PASS	AB=0.897;AC=14;AF=0.250;AN=56;BaseQRankSum=5.398;DP=398;FS=0.000;HRun=13;HaplotypeScore=54.2463;InbreedingCoeff=0.4935;MQ=65.32;MQ0=14;MQRankSum=0.716;QD=8.86;ReadPosRankSum=0.269;VQSLOD=2.3310;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,17:31:9.59:338,10,0	1/1:1,2:3:6.01:56,6,0	0/0:15,0:8:2.42:0,2,26	0/0:15,0:10:2.13:0,2,30	0/0:16,0:15:23.75:0,24,164	0/0:17,0:17:32.20:0,32,215	0/1:10,5:15:7.13:72,0,7	0/0:27,0:24:37.56:0,38,247	0/0:9,0:9:14.85:0,15,103	1/1:9,7:16:23.80:195,24,0	1/1:5,6:12:17.97:159,18,0	0/0:4,0:3:2.97:0,3,21	0/0:10,0:10:17.78:0,18,122	0/0:10,0:11:25.82:0,26,170	0/0:12,0:12:16.09:0,16,105	0/1:8,1:10:1.99:2,0,124	1/1:4,23:26:57.07:529,57,0	0/0:6,0:11:19.24:0,19,67	0/0:23,0:21:33.69:0,34,217	0/1:10,1:13:5.96:6,0,93	0/1:7,0:7:14.59:17,0,15	0/0:4,0:4:5.84:0,6,34	0/0:7,0:6:2.89:0,3,20	0/0:5,0:5:11.88:0,12,82	0/0:15,1:15:3.90:0,4,163	0/0:24,2:24:16.59:0,17,253	0/0:20,1:21:22.69:0,23,300	0/0:6,0:5:11.89:0,12,82
chr10	85877510	.	TACACACACAC	T	2317.41	PASS	AB=0.829;AC=11;AF=0.196;AN=56;BaseQRankSum=8.453;DP=741;FS=3.174;HRun=0;HaplotypeScore=208.3537;InbreedingCoeff=0.7625;MQ=60.08;MQ0=11;MQRankSum=-6.456;QD=17.83;ReadPosRankSum=1.341;VQSLOD=2.8479;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:33:23.43:142,0,23	1/1:5,5:10:8.95:268,9,0	0/0:31,0:21:3.01:0,3,88	0/0:35,0:23:3.01:0,3,40	0/0:16,0:16:30.10:0,30,1046	0/0:24,0:24:51.18:0,51,2304	1/1:6,0:13:3.37:81,3,0	0/0:30,0:29:28.89:0,29,716	0/0:20,0:28:23.57:0,24,590	1/1:19,12:30:36.09:887,36,0	1/1:8,9:17:21.07:568,21,0	0/0:29,0:28:42.14:0,42,1831	0/0:21,0:27:49.40:0,49,1819	0/0:22,0:21:45.15:0,45,1825	0/0:26,0:26:48.16:0,48,2033	0/0:44,0:46:96.39:0,96,3998	1/1:16,9:25:17.85:537,18,0	0/0:10,0:21:20.94:0,21,895	0/0:23,0:22:27.94:0,28,910	0/0:21,0:21:34.06:0,34,1425	0/0:52,0:51:71.39:0,71,3061	0/0:22,0:24:51.16:0,51,1965	0/0:21,0:22:27.08:0,27,1087	0/0:44,0:43:72.22:0,72,2973	0/0:20,0:21:33.11:0,33,1368	0/0:27,0:26:63.22:0,63,2409	0/0:24,0:26:46.38:0,46,1645	0/0:13,0:12:33.10:0,33,1182
chr10	85880413	.	T	TC	7307.44	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-15.800;DP=935;FS=6.823;HRun=3;HaplotypeScore=84.6209;InbreedingCoeff=0.9996;MQ=83.18;MQ0=0;MQRankSum=-0.709;QD=34.63;ReadPosRankSum=0.319;VQSLOD=5.1474;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,1710	0/0:23,0:23:66.14:0,66,754	0/0:25,0:25:57.04:0,57,722	0/0:26,0:27:67.84:0,68,772	0/0:43,0:43:99:0,123,1471	0/0:24,0:24:68.94:0,69,793	0/0:29,0:29:87.26:0,87,1033	1/1:3,25:28:72.21:973,72,0	0/0:40,0:40:99:0,105,1235	0/0:50,0:50:99:0,141,1647	0/0:22,0:22:54.12:0,54,611	0/0:54,0:54:99:0,162,1911	0/0:37,0:37:96.25:0,96,1116	0/0:42,0:42:99:0,114,1363	0/0:48,0:48:99:0,135,1619	0/0:34,0:34:96.29:0,96,1151	0/0:23,0:23:63.16:0,63,740	0/0:35,0:34:99:0,105,1244	1/1:3,19:22:57.15:760,57,0	1/1:1,36:37:93.20:1254,93,0	1/1:3,39:42:99:1427,102,0	0/0:28,0:28:81.24:0,81,957	0/0:26,0:26:69.18:0,69,799	0/0:38,0:38:99:0,111,1298	0/0:27,0:27:72.22:0,72,863	1/1:1,32:33:60.28:1220,60,0	1/1:2,37:39:96.32:1343,96,0	1/1:2,8:10:24.08:330,24,0
chr10	85880801	.	C	CT	5560.07	PASS	AB=0.672;AC=24;AF=0.429;AN=56;BaseQRankSum=-10.496;DP=649;FS=0.343;HRun=12;HaplotypeScore=75.0900;InbreedingCoeff=0.5918;MQ=73.17;MQ0=0;MQRankSum=0.406;QD=14.87;ReadPosRankSum=-3.563;VQSLOD=4.2778;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,33:44:27.62:717,28,0	0/1:5,7:12:22.79:125,0,23	0/1:21,0:22:0.43:0,0,168	0/0:10,0:11:13.95:0,14,93	0/0:23,2:26:23.05:0,23,325	0/0:27,1:31:39.39:0,39,426	0/1:4,10:14:13.77:204,0,14	1/1:17,30:47:84.52:783,85,0	0/0:23,0:23:47.60:0,48,344	1/1:8,19:27:60.08:577,60,0	1/1:3,11:15:22.97:237,23,0	0/0:17,0:21:32.86:0,33,215	0/0:13,0:13:26.80:0,27,197	0/0:21,0:21:49.98:0,50,371	0/0:28,0:29:67.62:0,68,486	0/0:22,0:22:47.65:0,48,348	1/1:11,19:32:15.95:450,16,0	0/1:10,13:23:20.69:297,0,21	1/1:7,17:25:53.87:484,54,0	1/1:7,19:27:19.27:371,19,0	0/1:7,16:24:8.84:386,0,9	0/0:20,0:20:43.76:0,44,312	0/0:18,0:20:33.81:0,34,230	0/0:24,0:23:59.58:0,60,438	0/0:13,0:13:20.77:0,21,151	1/1:9,14:23:17.15:328,17,0	0/1:8,18:26:14.65:358,0,15	1/1:2,11:13:8.14:241,8,0
chr10	85881092	.	AT	A	3017.12	PASS	AB=0.853;AC=28;AF=0.500;AN=56;BaseQRankSum=8.475;DP=593;FS=0.351;HRun=13;HaplotypeScore=74.7009;InbreedingCoeff=0.7908;MQ=70.70;MQ0=0;MQRankSum=0.225;QD=9.89;ReadPosRankSum=1.641;VQSLOD=3.1627;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,2:43:60.92:202,61,0	1/1:2,4:6:8.93:66,9,0	0/0:15,0:13:18.53:0,19,145	0/1:8,0:8:8.68:9,0,38	0/0:25,0:25:44.88:0,45,409	0/0:25,0:25:48.03:0,48,447	1/1:1,0:13:24.44:71,24,0	1/1:5,28:34:50.31:523,50,0	0/0:11,0:15:29.88:0,30,273	1/1:3,20:25:63.10:433,63,0	1/1:4,16:20:41.64:306,42,0	0/0:26,0:26:66.06:0,66,619	0/0:22,0:22:48.03:0,48,449	0/0:30,1:31:51.40:0,51,635	0/0:25,0:30:59.70:0,60,526	0/0:24,0:26:22.03:0,22,463	1/1:5,14:21:27.27:278,27,0	1/1:2,0:19:28.51:83,29,0	1/1:7,9:16:5.52:168,6,0	1/1:8,11:19:0.53:168,1,0	1/1:6,12:18:26.83:197,27,0	0/0:15,1:16:2.12:0,2,177	0/0:25,0:25:47.18:0,47,579	0/0:21,1:22:34.89:0,35,454	0/0:10,0:10:27.02:0,27,253	0/1:14,10:24:6.48:234,0,6	1/1:5,22:27:18.09:299,18,0	1/1:3,9:12:26.84:197,27,0
chr10	85882737	.	CTCTT	C	2778.28	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.502;DP=416;FS=5.668;HRun=0;HaplotypeScore=65.5362;InbreedingCoeff=0.9344;MQ=74.02;MQ0=1;MQRankSum=0.119;QD=28.06;ReadPosRankSum=1.481;VQSLOD=3.0138;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,14:21:36.12:594,36,0	1/1:1,6:7:18.06:296,18,0	0/0:17,0:14:7.56:0,8,181	0/0:14,0:12:9.03:0,9,208	0/0:27,0:27:63.19:0,63,1395	0/0:6,0:6:9.03:0,9,220	1/1:5,9:13:18.06:297,18,0	0/0:23,0:23:42.11:0,42,789	0/0:11,0:11:27.07:0,27,609	1/1:9,12:21:39.07:589,39,0	1/1:2,7:9:21.07:347,21,0	0/0:8,0:8:15.05:0,15,366	0/0:8,0:8:15.05:0,15,337	0/0:13,0:13:33.10:0,33,757	0/0:13,0:13:30.10:0,30,732	0/0:13,0:13:15.05:0,15,366	1/1:4,23:26:51.17:841,51,0	0/0:12,0:12:30.10:0,30,730	0/0:17,0:17:21.01:0,21,373	0/0:10,0:10:21.07:0,21,512	0/0:21,0:21:42.13:0,42,957	0/0:15,0:14:33.10:0,33,739	0/0:19,0:19:39.13:0,39,905	0/0:28,0:28:69.24:0,69,1633	0/0:15,0:15:33.11:0,33,782	0/0:12,0:12:30.10:0,30,686	0/0:10,0:10:24.07:0,24,518	0/0:5,0:5:9.02:0,9,135
chr10	85884257	.	TTA	T	1126.59	PASS	AB=1.000;AC=17;AF=0.370;AN=46;BaseQRankSum=1.206;DP=393;FS=68.016;HRun=0;HaplotypeScore=26.2801;InbreedingCoeff=0.4862;MQ=27.44;MQ0=142;MQRankSum=-2.942;QD=5.34;ReadPosRankSum=4.306;VQSLOD=0.5953;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:14:26.53:166,27,0	./.	0/0:18,1:2:2.74:0,3,12	0/0:13,0:4:6:0,6,60	0/0:9,0:5:5.89:0,6,37	0/0:15,0:14:20.75:0,21,196	./.	0/1:34,0:22:10.44:246,0,10	0/0:15,0:8:8.89:0,9,77	1/1:16,0:6:11.82:80,12,0	1/1:9,0:5:5.69:35,6,0	0/0:6,0:3:5.91:0,6,38	0/0:9,0:2:3.01:0,3,36	0/0:9,0:7:8.82:0,9,54	0/0:11,0:4:6.57:0,7,32	0/0:11,0:6:14.75:0,15,127	./.	1/1:31,0:16:44.45:303,44,0	1/1:12,11:13:21.30:241,21,0	1/1:7,0:3:5.91:38,6,0	./.	0/0:4,0:2:5.80:0,6,32	0/0:7,0:3:8.77:0,9,51	./.	0/0:17,0:9:17.65:0,18,126	1/1:12,0:8:0.76:61,1,0	0/1:19,0:9:5.88:66,0,6	0/1:30,0:9:13.90:51,0,14
chr10	85885606	.	GAC	G	13021.91	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=18.782;DP=773;FS=17.365;HRun=0;HaplotypeScore=137.7735;InbreedingCoeff=0.9994;MQ=89.96;MQ0=1;MQRankSum=-4.994;QD=36.37;ReadPosRankSum=0.351;VQSLOD=5.4395;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:38:99:1418,99,0	1/1:0,8:8:20.94:301,21,0	0/0:32,0:32:87.30:0,87,1587	0/0:33,0:33:99:0,99,1711	0/0:32,0:32:96.31:0,96,1716	0/0:27,0:27:81.28:0,81,1485	1/1:1,17:18:48.16:681,48,0	1/1:7,16:23:48.13:649,48,0	0/0:44,0:44:99:0,132,2376	1/1:2,26:28:75.25:1070,75,0	1/1:1,23:23:60.20:859,60,0	0/0:32,0:32:96.33:0,96,1751	0/0:25,0:25:75.26:0,75,1363	0/0:34,0:34:96.33:0,96,1746	0/0:22,0:22:63.22:0,63,1155	0/0:34,0:34:96.32:0,96,1723	1/1:1,25:26:69.23:988,69,0	1/1:2,16:18:42.14:602,42,0	1/1:2,18:20:54.16:754,54,0	1/1:0,27:27:66.22:945,66,0	1/1:3,50:53:99:1848,129,0	0/0:19,0:19:57.17:0,57,1004	0/0:28,0:28:81.28:0,81,1459	0/0:30,0:30:87.30:0,87,1594	0/0:23,0:23:63.22:0,63,1146	1/1:1,30:31:84.23:1147,84,0	1/1:2,32:34:93.31:1330,93,0	1/1:0,10:10:30.10:429,30,0
chr10	85888629	.	T	TAAGAAC	10282.51	PASS	AB=0.516;AC=27;AF=0.482;AN=56;BaseQRankSum=10.625;DP=630;FS=4.881;HRun=0;HaplotypeScore=119.5758;InbreedingCoeff=0.8554;MQ=70.45;MQ0=0;MQRankSum=-10.001;QD=30.88;ReadPosRankSum=1.752;VQSLOD=4.3849;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:37:41.66:830,42,0	1/1:0,0:8:15.05:449,15,0	0/0:19,0:19:44.90:0,45,712	0/0:12,0:12:32.98:0,33,663	0/0:21,0:21:57.13:0,57,1059	0/0:26,0:25:69.21:0,69,1484	1/1:0,0:11:6.02:180,6,0	1/1:8,0:50:79.67:1491,80,0	0/0:29,0:29:81.22:0,81,1607	1/1:1,0:31:70.96:1646,71,0	1/1:1,1:12:19.13:489,19,0	0/0:21,0:21:60.15:0,60,1131	0/0:22,0:22:57:0,57,1078	0/0:18,0:18:54.16:0,54,1059	0/0:33,0:33:99:0,99,1959	0/0:20,0:20:57.16:0,57,1150	1/1:1,0:15:3.01:90,3,0	1/1:2,0:20:0.30:97,0,0	1/1:0,0:25:21.94:614,22,0	1/1:1,0:23:43.69:986,44,0	1/1:5,0:20:11.83:284,12,0	0/0:15,0:15:44.99:0,45,835	0/0:27,0:27:81.21:0,81,1587	0/0:21,0:21:63.18:0,63,1250	0/0:13,0:13:39.07:0,39,702	1/1:2,0:31:48.37:1281,48,0	1/1:3,0:33:51.18:1504,51,0	0/1:1,0:16:8.94:343,0,9
chr10	85889594	.	ACCTT	A	4634.30	PASS	AB=0.812;AC=29;AF=0.659;AN=44;BaseQRankSum=-6.918;DP=458;FS=67.502;HRun=0;HaplotypeScore=81.1438;InbreedingCoeff=-0.1422;MQ=47.24;MQ0=76;MQRankSum=-2.839;QD=12.33;ReadPosRankSum=-6.167;VQSLOD=-0.1910;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:1:3:0,3,29	./.	0/1:66,0:11:36.51:37,0,259	0/0:64,0:6:11.77:0,12,147	0/1:21,4:25:82.96:107,0,83	1/1:9,9:19:0.63:396,1,0	./.	1/1:23,10:27:49.43:564,49,0	0/1:5,2:7:11.16:92,0,11	./.	./.	1/1:4,9:13:32.53:418,33,0	0/1:15,7:19:66.19:270,0,66	0/1:14,7:15:51.14:178,0,51	0/1:7,2:7:19.93:66,0,20	0/1:6,4:8:9.18:39,0,9	./.	./.	1/1:16,3:14:34.96:352,35,0	1/1:16,1:14:35.25:424,35,0	1/1:5,0:4:1.55:4,2,0	0/1:7,0:4:1.09:1,0,2	0/1:9,2:10:9.86:127,0,10	1/1:4,3:6:8.18:101,8,0	0/1:12,4:15:44.75:207,0,45	1/1:16,8:22:8.71:630,9,0	0/1:12,6:17:13.10:431,0,13	1/1:14,5:8:12.03:191,12,0
chr10	85889933	.	GTTCC	G	1320.95	PASS	AB=0.900;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.401;DP=279;FS=3.775;HRun=0;HaplotypeScore=61.5421;InbreedingCoeff=0.5994;MQ=99.92;MQ0=1;MQRankSum=-0.310;QD=13.21;ReadPosRankSum=-1.270;VQSLOD=2.6504;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:3,0:4:1.53:41,0,2	1/1:3,0:3:8.90:107,9,0	0/0:33,0:28:72.98:0,73,1178	0/1:19,0:18:23.72:24,0,622	0/0:9,0:11:14.55:0,15,239	0/0:11,0:11:27.09:0,27,449	1/1:18,0:21:31.02:448,31,0	0/0:12,0:14:1.09:0,1,5	0/0:7,0:7:12.04:0,12,212	1/1:0,10:11:18.05:235,18,0	1/1:0,0:7:8.94:87,9,0	0/0:10,0:10:27.09:0,27,542	0/0:6,0:6:17.98:0,18,327	0/0:8,0:8:21.07:0,21,417	0/0:10,0:10:21.03:0,21,426	0/0:15,0:15:39.13:0,39,798	1/1:14,2:19:44.25:535,44,0	0/0:6,0:6:13.40:0,13,217	0/0:6,0:6:9.69:0,10,64	0/0:1,0:1:3.01:0,3,34	0/1:8,0:9:13.45:13,0,53	0/0:8,0:8:18.06:0,18,279	0/0:8,0:8:24.08:0,24,453	0/0:4,0:4:12.04:0,12,244	0/0:7,0:7:17.73:0,18,299	1/1:7,0:7:1.72:3,2,0	0/0:8,0:8:3:0,3,67	0/0:5,0:5:9.35:0,9,119
chr10	85890182	.	CA	C	2654.64	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.454;DP=675;FS=4.952;HRun=2;HaplotypeScore=60.7795;InbreedingCoeff=0.9986;MQ=58.48;MQ0=8;MQRankSum=3.367;QD=33.18;ReadPosRankSum=-0.197;VQSLOD=3.4701;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:84.23:0,84,1188	1/1:0,9:9:21.07:272,21,0	0/0:29,0:12:33.09:0,33,474	0/0:21,0:17:48.09:0,48,639	0/0:24,0:24:72.24:0,72,1079	0/0:27,0:27:81.27:0,81,1210	0/0:21,0:21:63.21:0,63,940	0/0:21,0:21:63.20:0,63,915	0/0:20,0:20:57.19:0,57,854	1/1:1,26:27:75.21:946,75,0	1/1:0,13:13:39.13:506,39,0	0/0:28,0:28:84.27:0,84,1239	0/0:24,0:24:72.24:0,72,1078	0/0:23,0:23:66.22:0,66,987	0/0:30,0:30:90.28:0,90,1301	0/0:42,0:42:99:0,126,1835	1/1:0,31:31:84.27:1090,84,0	0/0:20,0:20:60.16:0,60,874	0/0:19,0:17:51.16:0,51,745	0/0:22,0:22:66.22:0,66,981	0/0:35,0:35:99:0,102,1505	0/0:21,0:21:60.20:0,60,885	0/0:24,0:24:72.11:0,72,1012	0/0:29,0:29:87.25:0,87,1242	0/0:10,0:10:30.10:0,30,450	0/0:36,0:36:99:0,102,1529	0/0:27,0:27:78.25:0,78,1123	0/0:12,0:12:36.12:0,36,539
chr10	85892207	.	AC	A	4225.83	PASS	AB=0.934;AC=30;AF=0.536;AN=56;BaseQRankSum=3.206;DP=510;FS=3.504;HRun=10;HaplotypeScore=61.1902;InbreedingCoeff=0.7384;MQ=73.06;MQ0=0;MQRankSum=-0.343;QD=13.54;ReadPosRankSum=1.344;VQSLOD=4.9129;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,27:43:66.10:622,66,0	1/1:2,5:7:14.99:130,15,0	0/0:18,0:12:14.31:0,14,135	0/1:25,0:16:9.17:9,0,117	0/0:16,0:16:45.10:0,45,481	0/0:10,0:10:24.06:0,24,265	1/1:3,13:16:29.99:260,30,0	1/1:8,10:18:29.92:255,30,0	0/0:13,0:13:33.56:0,34,366	1/1:7,6:13:20.99:182,21,0	1/1:2,8:10:20.96:176,21,0	0/1:16,2:18:3.74:4,0,392	0/0:24,0:24:53.99:0,54,565	0/0:17,1:18:13.09:0,13,363	0/0:23,0:24:63:0,63,678	0/0:20,1:21:22.55:0,23,473	1/1:8,23:31:68.91:599,69,0	0/0:16,1:17:19.09:0,19,425	1/1:8,18:26:56.88:485,57,0	1/1:4,11:15:29.94:252,30,0	1/1:4,7:11:14.99:130,15,0	0/0:20,0:20:35.96:0,36,399	0/1:12,1:13:5.02:5,0,163	0/0:16,1:17:16.06:0,16,405	0/1:9,1:10:5.03:5,0,167	1/1:7,16:23:53.89:463,54,0	1/1:8,22:30:71.97:623,72,0	1/1:0,2:2:3:26,3,0
chr10	85894519	.	TACACACACACACACACAC	T	235.62	PASS	AB=0.783;AC=5;AF=0.109;AN=46;BaseQRankSum=1.605;DP=436;FS=0.000;HRun=0;HaplotypeScore=166.9403;InbreedingCoeff=0.3008;MQ=70.30;MQ0=39;MQRankSum=-0.767;QD=3.74;ReadPosRankSum=0.498;VQSLOD=2.6859;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,8:27:2.96:20,3,0	0/0:6,0:5:2.21:0,2,8	./.	./.	0/0:10,0:8:9.03:0,9,631	0/0:31,0:31:41.96:0,42,2000	1/1:18,0:15:5:77,5,0	./.	0/0:8,0:6:6.02:0,6,401	0/0:13,0:16:21.07:0,21,611	./.	0/0:14,0:12:9.03:0,9,527	0/0:14,0:12:15.52:0,16,702	0/0:15,0:12:18.48:0,18,1316	0/0:15,0:14:7.27:0,7,276	0/0:14,0:12:15.05:0,15,1058	0/0:15,0:11:17.52:0,18,200	0/0:9,0:7:3.01:0,3,131	0/0:11,0:11:3.63:0,4,15	./.	0/0:25,0:17:6.02:0,6,79	0/0:17,0:17:9.03:0,9,606	0/0:7,0:6:5.98:0,6,68	0/0:28,0:27:15:0,15,685	0/0:12,0:9:9.03:0,9,453	0/1:13,0:18:52.48:240,0,52	0/0:7,0:5:6.02:0,6,121	0/0:10,0:7:4.57:0,5,52
chr10	85895139	.	T	TA	836	PASS	AB=0.958;AC=16;AF=0.308;AN=52;BaseQRankSum=2.043;DP=303;FS=6.740;HRun=11;HaplotypeScore=57.3516;InbreedingCoeff=0.7613;MQ=70.30;MQ0=4;MQRankSum=-6.015;QD=7.74;ReadPosRankSum=-1.243;VQSLOD=1.5065;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,4:9:17.99:168,18,0	1/1:1,2:3:6.01:60,6,0	0/0:30,0:13:21.86:0,22,116	0/1:39,0:17:0.61:1,0,98	0/0:12,0:12:29.88:0,30,232	0/0:7,0:7:17.93:0,18,139	1/1:2,3:5:11.97:107,12,0	0/0:35,0:33:77.63:0,78,604	0/0:4,0:4:11.95:0,12,93	1/1:3,6:9:21.14:186,21,0	1/1:4,4:8:14.90:137,15,0	0/0:4,0:4:8.95:0,9,67	0/1:10,1:11:9.52:10,0,118	0/0:4,0:4:11.95:0,12,93	0/0:12,0:12:29.88:0,30,232	0/0:5,0:5:14.91:0,15,111	1/1:6,11:17:31.68:323,32,0	1/1:7,0:6:5.49:24,5,0	0/0:16,0:16:29.86:0,30,232	0/0:5,0:5:14.94:0,15,116	0/0:4,0:4:8.97:0,9,70	./.	./.	0/0:4,0:4:8.96:0,9,70	0/0:5,0:5:10.50:0,11,74	0/0:16,0:16:35.82:0,36,278	0/0:13,0:13:26.87:0,27,209	0/0:18,0:18:50.81:0,51,395
chr10	85895161	.	T	TAAAAA	2163.65	PASS	AB=0.960;AC=15;AF=0.268;AN=56;BaseQRankSum=4.910;DP=383;FS=3.480;HRun=7;HaplotypeScore=74.8118;InbreedingCoeff=0.8270;MQ=63.99;MQ0=13;MQRankSum=-4.932;QD=19.49;ReadPosRankSum=-0.546;VQSLOD=-0.5105;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,1:8:21:325,21,0	1/1:5,0:5:15.04:283,15,0	0/1:46,0:15:19.87:20,0,43	0/0:72,0:25:9.18:0,9,97	0/0:13,0:13:33.04:0,33,488	0/0:12,0:12:35.97:0,36,443	1/1:6,1:7:17.96:241,18,0	0/0:36,0:33:56.11:0,56,953	0/0:4,0:4:12.04:0,12,207	1/1:11,1:13:35.97:612,36,0	1/1:6,0:6:9.02:139,9,0	0/0:4,0:4:12.03:0,12,178	0/0:11,0:11:32.89:0,33,384	0/0:8,0:8:21.03:0,21,296	0/0:15,0:15:45.11:0,45,674	0/0:7,0:7:21.02:0,21,253	1/1:16,2:18:38.02:582,38,0	1/1:5,0:5:12.84:154,13,0	0/0:10,0:10:24.05:0,24,354	0/0:9,0:9:24.03:0,24,304	0/0:4,0:4:8.99:0,9,99	0/0:3,0:3:8.99:0,9,76	0/0:4,0:4:12:0,12,124	0/0:2,0:2:6.02:0,6,106	0/0:11,0:11:29.96:0,30,327	0/0:16,0:16:47.44:0,47,672	0/0:13,0:13:33.09:0,33,524	0/0:16,0:16:39.01:0,39,571
chr10	85896057	.	AT	A	2986.92	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.185;DP=595;FS=1.752;HRun=8;HaplotypeScore=55.5033;InbreedingCoeff=0.9928;MQ=70.79;MQ0=0;MQRankSum=-1.082;QD=21.80;ReadPosRankSum=2.323;VQSLOD=4.0365;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:69.11:666,69,0	1/1:0,11:11:27.04:261,27,0	0/0:17,0:16:36.09:0,36,407	0/0:8,0:7:11.77:0,12,108	0/0:23,0:23:63.19:0,63,750	0/0:25,0:25:75.23:0,75,906	1/1:0,14:14:33.05:319,33,0	0/0:35,0:35:90.25:0,90,1059	0/0:22,0:22:60.18:0,60,721	1/1:3,25:28:75.08:715,75,0	1/1:4,31:35:84.13:809,84,0	0/0:22,0:22:63.18:0,63,750	0/0:18,0:18:51.11:0,51,590	0/0:19,0:19:45.12:0,45,531	0/0:24,0:24:66.19:0,66,786	0/0:17,0:17:48.14:0,48,571	1/1:4,16:20:42.06:405,42,0	0/0:12,0:12:33.09:0,33,386	0/0:32,0:32:84.24:0,84,1001	0/0:24,0:24:60.11:0,60,697	0/0:13,0:13:36.04:0,36,417	0/0:16,0:16:48.13:0,48,568	0/0:20,0:20:54.17:0,54,652	0/0:10,0:10:27.08:0,27,326	0/0:26,0:26:75.21:0,75,885	0/0:34,0:34:93.27:0,93,1104	0/0:26,0:25:72.21:0,72,859	0/0:15,0:15:33.10:0,33,399
chr10	85897944	.	GT	G	4953.45	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.039;DP=570;FS=4.553;HRun=1;HaplotypeScore=64.4636;InbreedingCoeff=0.9947;MQ=80.89;MQ0=0;MQRankSum=-0.330;QD=36.69;ReadPosRankSum=0.563;VQSLOD=5.0834;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:99:1423,102,0	1/1:0,7:7:21.07:294,21,0	0/0:11,0:11:14.92:0,15,326	0/0:22,0:22:57.65:0,58,820	0/0:9,0:9:27.09:0,27,411	0/0:25,0:25:72.21:0,72,1093	1/1:0,21:21:48.16:671,48,0	0/0:36,0:36:99:0,102,1530	0/0:23,0:23:69.24:0,69,1101	1/1:0,31:31:93.28:1276,93,0	1/1:0,8:8:24.08:325,24,0	0/0:21,0:21:63.20:0,63,983	0/0:18,0:18:54.15:0,54,813	0/0:22,0:22:66.22:0,66,1045	0/0:28,0:28:84.29:0,84,1340	0/0:29,0:29:87.30:0,87,1388	1/1:0,29:29:69.23:964,69,0	0/0:9,0:9:24.04:0,24,356	0/0:15,0:15:45.13:0,45,656	0/0:22,0:22:66.22:0,66,1037	0/0:27,0:27:78.27:0,78,1229	0/0:14,0:14:42.13:0,42,636	0/0:12,0:12:36.12:0,36,551	0/0:21,0:21:63.21:0,63,996	0/0:20,0:20:60.19:0,60,925	0/0:20,0:20:34.31:0,34,883	0/0:21,0:21:63.21:0,63,1004	0/0:10,0:10:30.10:0,30,474
chr10	85898930	.	GCT	G	1347.46	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.256;DP=516;FS=7.968;HRun=0;HaplotypeScore=74.8375;InbreedingCoeff=0.9802;MQ=71.75;MQ0=1;MQRankSum=-0.291;QD=11.42;ReadPosRankSum=-0.393;VQSLOD=2.2972;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:26,6:32:48.26:419,48,0	1/1:2,3:5:11.65:93,12,0	0/0:15,0:12:8.84:0,9,156	0/0:19,0:14:29.35:0,29,256	0/0:17,0:16:41.61:0,42,489	0/0:14,0:14:41.98:0,42,558	1/1:13,2:15:26.35:240,26,0	0/0:26,0:26:72.04:0,72,964	0/0:14,0:14:32.87:0,33,451	1/1:22,2:24:30.08:367,30,0	1/1:14,0:14:31.78:171,32,0	0/0:20,0:20:46.93:0,47,532	0/0:24,0:24:72.07:0,72,971	0/0:17,0:17:41.84:0,42,570	0/0:22,0:22:57.06:0,57,782	0/0:21,0:21:50.91:0,51,795	1/1:26,2:28:37.29:245,37,0	0/0:19,0:19:53.97:0,54,726	0/0:15,0:15:33.09:0,33,499	0/0:18,0:18:37.97:0,38,627	0/0:14,0:14:39.01:0,39,502	0/0:14,0:14:36.08:0,36,502	0/0:16,0:16:41.95:0,42,489	0/0:23,0:23:62.98:0,63,860	0/0:22,0:22:57.05:0,57,800	0/0:17,0:17:47.75:0,48,536	0/0:19,0:19:53.92:0,54,670	0/0:12,0:12:35.79:0,36,416
chr10	85898932	.	TC	T	2459.38	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=5.227;DP=530;FS=0.925;HRun=1;HaplotypeScore=63.6850;InbreedingCoeff=0.9262;MQ=67.39;MQ0=2;MQRankSum=-1.278;QD=17.69;ReadPosRankSum=0.642;VQSLOD=3.8328;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,30:37:61.01:733,61,0	1/1:3,1:4:11.98:119,12,0	0/1:13,0:10:2.36:2,0,94	0/0:17,0:12:24.61:0,25,248	0/0:17,0:16:19.70:0,20,322	0/0:15,0:15:37.65:0,38,420	1/1:3,14:17:27.05:323,27,0	0/0:25,0:25:64.62:0,65,734	0/0:14,0:14:23.18:0,23,310	1/1:15,8:23:57.60:565,58,0	1/1:1,16:17:33:408,33,0	0/0:21,0:21:47.63:0,48,446	0/0:26,0:25:68.42:0,68,744	0/0:20,0:20:31.55:0,32,445	0/0:23,0:23:55.52:0,56,578	0/0:20,1:21:24.84:0,25,585	1/1:2,26:28:39.09:497,39,0	0/0:23,0:23:49.50:0,49,535	0/0:14,0:14:32.26:0,32,379	0/0:18,0:18:48.63:0,49,512	0/0:14,0:14:38.50:0,38,395	0/0:13,0:13:36.05:0,36,379	0/0:15,0:15:40.46:0,40,381	0/0:24,0:24:58.49:0,58,636	0/0:22,0:22:55.56:0,56,602	0/0:18,0:18:39.30:0,39,397	0/0:19,0:19:49.40:0,49,481	0/0:12,0:12:28.74:0,29,292
chr10	85898933	.	CT	C	592.67	PASS	AB=0.910;AC=18;AF=0.321;AN=56;BaseQRankSum=9.706;DP=562;FS=2.157;HRun=14;HaplotypeScore=81.9656;InbreedingCoeff=0.2899;MQ=65.86;MQ0=3;MQRankSum=1.618;QD=2.22;ReadPosRankSum=0.882;VQSLOD=-0.3066;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:41:24.89:205,25,0	1/1:4,0:4:7.09:37,7,0	0/0:12,0:10:4.05:0,4,77	0/1:15,0:11:6.87:7,0,35	0/1:15,3:18:28.62:29,0,177	0/0:16,0:16:10.46:0,10,231	1/1:17,0:17:22.30:99,22,0	0/0:24,1:26:32.96:0,33,396	0/1:12,3:15:8.12:8,0,213	0/1:24,0:23:56.43:67,0,56	1/1:18,0:18:8.84:99,9,0	0/1:24,0:24:4.96:5,0,203	0/0:26,1:26:38.97:0,39,449	0/0:19,2:21:21.30:0,21,298	0/0:20,0:24:28.35:0,28,365	0/0:21,0:21:22.53:0,23,322	1/1:30,0:30:14.44:144,14,0	0/0:20,2:23:23.30:0,23,333	0/0:14,0:14:28.27:0,28,250	0/0:16,1:18:14.61:0,15,298	0/0:13,0:14:23.86:0,24,210	0/0:13,0:15:26.77:0,27,214	0/0:14,1:15:0.91:0,1,146	0/0:24,1:25:12.84:0,13,384	0/0:21,1:23:27.28:0,27,375	0/1:21,2:23:23.88:24,0,99	0/1:16,4:20:19.54:20,0,197	0/1:14,2:15:28.24:28,0,181
chr10	85899772	.	A	AGTCGTC	3931	PASS	AB=0.714;AC=23;AF=0.442;AN=52;BaseQRankSum=-3.625;DP=265;FS=3.327;HRun=0;HaplotypeScore=58.4920;InbreedingCoeff=0.8232;MQ=88.33;MQ0=0;MQRankSum=-7.172;QD=35.74;ReadPosRankSum=-2.640;VQSLOD=2.5827;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,12:18:27.09:896,27,0	./.	0/0:17,0:17:26.43:0,26,489	0/0:20,0:20:38.35:0,38,711	0/0:9,0:9:18.06:0,18,377	0/0:14,0:14:21.07:0,21,461	1/1:4,7:11:15.05:487,15,0	1/1:8,12:20:41.44:575,41,0	0/0:2,0:2:3.01:0,3,66	1/1:2,4:6:12.02:313,12,0	1/1:2,1:3:3.01:101,3,0	0/0:10,0:10:21.07:0,21,461	0/0:12,0:12:21.07:0,21,444	0/0:13,0:13:21.07:0,21,445	0/0:10,0:10:24.08:0,24,512	0/0:12,0:12:24.07:0,24,485	./.	1/1:2,3:5:12.04:404,12,0	1/1:5,0:5:11.65:74,12,0	1/1:3,4:7:9.03:301,9,0	0/1:9,5:15:0:0,0,0	0/0:6,0:6:9.03:0,9,197	0/0:5,0:5:6.02:0,6,132	0/0:4,0:4:9.03:0,9,197	0/0:13,0:13:30.09:0,30,616	1/1:4,0:4:8.85:56,9,0	1/1:4,5:11:21.50:624,22,0	1/1:3,2:5:3.01:101,3,0
chr10	85900494	.	TA	T	1020.16	PASS	AB=0.804;AC=23;AF=0.411;AN=56;BaseQRankSum=0.442;DP=467;FS=2.720;HRun=16;HaplotypeScore=60.3095;InbreedingCoeff=0.0741;MQ=70.44;MQ0=6;MQRankSum=1.550;QD=3.68;ReadPosRankSum=2.731;VQSLOD=0.1469;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:20:41.37:233,41,0	0/1:2,6:8:7.49:72,0,7	0/0:44,0:17:17.25:0,17,115	0/1:23,0:6:4.45:4,0,30	0/0:19,3:25:1.25:0,1,293	0/0:10,0:11:17.14:0,17,167	1/1:3,8:11:20.54:126,21,0	0/1:16,3:32:6.93:7,0,258	0/1:8,3:11:15.05:15,0,105	1/1:5,8:13:1.27:117,1,0	1/1:7,10:20:26.51:143,27,0	0/1:9,0:9:1.86:2,0,86	0/1:5,1:6:3.19:3,0,74	0/1:3,3:6:9.02:9,0,41	0/0:8,0:8:20.88:0,21,168	0/1:15,5:21:28.33:28,0,252	1/1:8,17:32:5.06:206,5,0	0/1:9,13:22:9.10:174,0,9	0/0:8,0:15:28.84:0,29,167	0/0:11,0:18:29.13:0,29,187	0/0:1,0:4:5.84:0,6,39	0/1:2,2:4:24.05:24,0,34	0/1:8,2:10:15.05:15,0,105	0/1:6,1:8:3.03:3,0,86	0/1:14,4:19:6.29:6,0,150	0/0:7,0:19:33.60:0,34,170	0/0:12,0:27:45.39:0,45,301	0/0:6,0:15:34.71:0,35,214
chr10	85900632	.	G	GAA	516.39	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.200;DP=552;FS=2.313;HRun=12;HaplotypeScore=74.0630;InbreedingCoeff=0.7445;MQ=66.95;MQ0=13;MQRankSum=-0.924;QD=16.14;ReadPosRankSum=-0.791;VQSLOD=2.5999;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:21:29.01:0,29,317	0/0:9,0:9:24.01:0,24,222	0/0:33,0:12:14.05:0,14,103	0/0:19,0:5:5.97:0,6,47	0/0:15,0:18:10.16:0,10,227	0/0:13,0:13:36:0,36,323	0/0:23,0:22:44.77:0,45,405	0/0:22,0:24:35.13:0,35,321	0/0:12,0:13:35.74:0,36,311	0/0:19,0:19:32.36:0,32,322	0/0:18,0:20:13.34:0,13,211	0/0:19,0:21:38.87:0,39,312	0/0:8,0:8:18.02:0,18,167	0/0:14,0:15:29.67:0,30,256	0/0:19,0:21:42.58:0,43,374	0/0:17,0:18:38.71:0,39,345	0/0:36,0:40:92.04:0,92,850	1/1:8,20:32:52.22:611,52,0	0/0:24,0:28:33.30:0,33,360	0/0:13,0:13:6.77:0,7,246	0/0:32,0:31:32.12:0,32,528	0/0:6,0:8:17.75:0,18,150	0/0:15,0:16:14.84:0,15,186	0/0:17,0:16:32.77:0,33,337	0/0:11,0:12:23.71:0,24,206	0/0:13,0:13:23.70:0,24,206	0/0:29,0:28:65.91:0,66,609	0/0:7,0:6:17.96:0,18,156
chr10	85901308	.	ATC	A	3759.80	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.875;DP=848;FS=0.856;HRun=0;HaplotypeScore=97.7358;InbreedingCoeff=0.9999;MQ=89.41;MQ0=0;MQRankSum=-6.224;QD=40.00;ReadPosRankSum=1.087;VQSLOD=5.2772;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.32:0,93,1704	1/1:1,13:14:39.13:559,39,0	0/0:38,0:38:99:0,105,1863	0/0:24,0:24:66.23:0,66,1203	0/0:29,0:29:87.28:0,87,1555	0/0:28,0:28:81.28:0,81,1485	0/0:31,0:31:93.32:0,93,1699	0/0:48,0:48:99:0,132,2384	0/0:33,0:33:96.30:0,96,1679	1/1:1,25:26:75.23:1052,75,0	1/1:1,25:26:72.24:1031,72,0	0/0:46,0:46:99:0,138,2508	0/0:42,0:42:99:0,123,2246	0/0:30,0:30:90.29:0,90,1611	0/0:37,0:37:99:0,105,1917	0/0:46,0:46:99:0,129,2365	1/1:1,27:28:78.26:1118,78,0	0/0:13,0:13:36.12:0,36,660	0/0:15,0:15:42.14:0,42,765	0/0:34,0:34:99:0,102,1852	0/0:29,0:29:87.30:0,87,1585	0/0:27,0:27:81.26:0,81,1449	0/0:21,0:21:60.19:0,60,1094	0/0:26,0:26:75.26:0,75,1367	0/0:23,0:23:66.23:0,66,1190	0/0:36,1:37:68.38:0,68,1918	0/0:47,0:47:99:0,135,2445	0/0:18,0:18:48.16:0,48,880
chr10	85901958	.	A	AAG	2074.11	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=-0.248;DP=738;FS=9.517;HRun=0;HaplotypeScore=126.5732;InbreedingCoeff=0.8289;MQ=83.06;MQ0=7;MQRankSum=1.302;QD=10.64;ReadPosRankSum=2.889;VQSLOD=3.1786;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:44.83:0,45,461	0/0:15,0:15:32.68:0,33,277	0/0:75,0:31:30.54:0,31,538	0/0:74,0:31:56.98:0,57,708	0/0:26,0:26:75.11:0,75,969	0/0:21,0:21:60.07:0,60,801	0/0:17,0:17:36.06:0,36,388	1/1:26,1:27:33.20:397,33,0	0/0:20,0:20:50.51:0,51,656	0/0:22,0:22:61.25:0,61,558	0/0:21,0:21:55.10:0,55,471	0/0:15,0:15:42.04:0,42,474	0/0:29,0:29:78.05:0,78,1019	0/0:26,0:26:71.99:0,72,995	0/0:35,0:35:99:0,99,1306	0/0:41,0:41:99:0,101,1389	0/0:19,0:19:47.98:0,48,459	0/1:20,0:20:49.38:49,0,156	1/1:15,1:16:24:240,24,0	1/1:27,1:28:44.45:364,44,0	1/1:13,0:13:15.30:81,15,0	0/0:19,0:19:51.03:0,51,652	0/0:18,0:18:39.96:0,40,455	0/0:13,0:13:39.03:0,39,506	0/0:15,0:14:33.09:0,33,454	0/1:29,0:29:5.43:325,0,5	1/1:40,1:41:56.53:401,57,0	1/1:18,3:21:42.02:409,42,0
chr10	85901959	.	A	AG	4045.93	PASS	AB=0.538;AC=13;AF=0.232;AN=56;BaseQRankSum=-9.041;DP=730;FS=6.236;HRun=0;HaplotypeScore=107.2404;InbreedingCoeff=0.9166;MQ=82.24;MQ0=7;MQRankSum=0.132;QD=22.99;ReadPosRankSum=2.362;VQSLOD=5.0619;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:46.35:0,46,274	0/0:14,0:14:27.96:0,28,187	0/0:75,0:30:20.90:0,21,470	0/0:73,0:30:62:0,62,602	0/0:26,0:26:75.08:0,75,875	0/0:21,0:21:58.03:0,58,712	0/0:17,0:17:34.72:0,35,267	1/1:5,20:28:67.57:667,68,0	0/0:20,0:20:51.07:0,51,605	0/0:22,0:22:64.11:0,64,414	0/0:20,0:20:50.26:0,50,269	0/0:15,0:15:45.05:0,45,473	0/0:29,0:29:78.60:0,79,933	0/0:25,0:25:67.56:0,68,879	0/0:33,0:33:99:0,99,1170	0/0:41,0:41:99:0,110,1296	0/0:19,0:19:44.46:0,44,278	0/0:19,0:19:41.16:0,41,248	1/1:5,11:16:40.31:400,40,0	1/1:4,24:28:70.09:761,70,0	1/1:4,10:15:18.11:209,18,0	0/0:19,0:19:55.31:0,55,617	0/0:18,0:18:40.87:0,41,416	0/0:13,0:13:37.33:0,37,438	0/0:13,0:12:39.08:0,39,468	0/1:4,23:28:6.43:736,0,6	1/1:7,32:40:75.41:798,75,0	1/1:3,18:21:42.02:475,42,0
chr10	85901969	.	A	AC	2617	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-9.305;DP=740;FS=4.453;HRun=0;HaplotypeScore=110.4677;InbreedingCoeff=0.9973;MQ=81.23;MQ0=7;MQRankSum=1.223;QD=23.16;ReadPosRankSum=2.044;VQSLOD=5.0250;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:22:45.99:520,46,0	1/1:2,13:15:24.58:252,25,0	0/0:78,0:32:42.77:0,43,541	0/0:73,0:30:73.90:0,74,592	0/0:26,0:26:72.05:0,72,843	0/0:23,0:23:60.96:0,61,725	1/1:4,13:17:24.83:296,25,0	0/0:28,0:28:70.31:0,70,452	0/0:20,0:20:48.92:0,49,570	1/1:0,22:22:65.91:724,66,0	1/1:0,20:20:56.91:631,57,0	0/0:11,0:11:33.05:0,33,377	0/0:29,0:29:78.93:0,79,927	0/0:26,0:26:71.31:0,71,908	0/0:29,0:29:86.99:0,87,1044	0/0:38,0:38:99:0,102,1206	1/1:3,13:17:19.03:382,19,0	0/0:22,0:22:47.31:0,47,291	0/0:23,0:23:63.66:0,64,504	0/0:30,0:30:78.49:0,78,479	0/0:18,0:18:31.60:0,32,225	0/0:19,0:19:55.29:0,55,614	0/0:17,0:17:44.90:0,45,438	0/0:13,0:13:37.28:0,37,428	0/0:14,0:13:42.08:0,42,498	0/0:29,0:29:23.19:0,23,376	0/0:41,0:41:71.07:0,71,413	0/0:20,0:20:38.42:0,38,187
chr10	85903904	.	GA	G	7930.59	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.536;DP=856;FS=10.788;HRun=1;HaplotypeScore=83.5967;InbreedingCoeff=0.9988;MQ=81.99;MQ0=0;MQRankSum=-5.402;QD=39.26;ReadPosRankSum=-0.811;VQSLOD=4.2700;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,1984	0/0:10,0:10:30.10:0,30,476	0/0:24,0:24:57.16:0,57,832	0/0:28,0:28:61.96:0,62,869	0/0:29,0:29:84.27:0,84,1319	0/0:24,0:24:72.23:0,72,1128	0/0:32,0:32:96.31:0,96,1503	1/1:0,27:27:81.24:1098,81,0	0/0:27,0:27:81.28:0,81,1295	0/0:28,0:28:84.27:0,84,1319	0/0:20,0:20:60.20:0,60,959	0/0:53,0:53:99:0,157,2470	0/0:40,0:40:99:0,120,1918	0/0:31,0:31:93.32:0,93,1487	0/0:43,0:43:99:0,129,2037	0/0:36,0:36:99:0,108,1629	0/0:33,0:33:99:0,99,1532	0/0:26,0:26:78.22:0,78,1216	1/1:0,27:27:81.22:1093,81,0	1/1:0,23:23:60.20:839,60,0	1/1:0,58:58:99:2182,157,0	0/0:32,0:32:96.33:0,96,1532	0/0:27,0:27:81.28:0,81,1295	0/0:37,0:37:99:0,111,1769	0/0:31,0:31:93.32:0,93,1487	1/1:1,23:24:24.26:917,24,0	1/1:0,36:36:99:1509,108,0	1/1:0,7:7:21.07:294,21,0
chr10	85905196	.	TAA	T	776.47	PASS	AB=0.857;AC=13;AF=0.232;AN=56;BaseQRankSum=2.634;DP=596;FS=0.551;HRun=17;HaplotypeScore=79.2824;InbreedingCoeff=0.8234;MQ=72.39;MQ0=0;MQRankSum=1.066;QD=8.35;ReadPosRankSum=2.809;VQSLOD=0.8054;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,9:23:10.95:148,11,0	1/1:3,3:7:2.73:63,3,0	0/0:43,0:18:5.20:0,5,83	0/0:15,0:9:12.32:0,12,92	0/0:32,0:36:75.11:0,75,788	0/0:15,1:22:20.33:0,20,425	1/1:5,6:11:17.82:142,18,0	0/0:32,0:38:70.23:0,70,707	0/0:15,0:19:37.72:0,38,379	1/1:9,10:20:23.64:228,24,0	1/1:5,10:17:26.40:235,26,0	0/0:19,0:20:46.89:0,47,475	0/0:21,1:30:38.21:0,38,609	0/0:20,0:22:43.66:0,44,412	0/0:23,0:28:54.84:0,55,621	0/0:25,0:29:76.85:0,77,849	1/1:2,6:9:17.69:130,18,0	0/0:17,0:18:38.37:0,38,409	0/0:11,0:16:36.31:0,36,385	0/0:21,0:27:42.85:0,43,539	0/0:7,0:9:14.88:0,15,153	0/0:18,0:20:42.70:0,43,472	0/0:21,0:22:44.40:0,44,459	0/1:5,1:6:7.25:7,0,117	0/0:13,0:15:27.04:0,27,300	0/0:26,0:27:31.62:0,32,541	0/0:41,0:44:80.46:0,80,879	0/0:3,0:3:9.03:0,9,111
chr10	85912635	.	CT	C	721.71	PASS	AB=0.789;AC=18;AF=0.321;AN=56;BaseQRankSum=3.748;DP=593;FS=3.253;HRun=17;HaplotypeScore=73.0566;InbreedingCoeff=0.1436;MQ=70.82;MQ0=6;MQRankSum=2.679;QD=2.65;ReadPosRankSum=2.964;VQSLOD=-0.5162;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,18:43:28.40:174,0,28	0/1:3,4:7:7.41:52,0,7	0/0:26,1:14:11.81:0,12,76	0/0:14,0:8:2.97:0,3,20	0/0:26,1:30:11.27:0,11,238	0/0:21,2:24:15.97:0,16,207	1/1:6,15:21:5.33:126,5,0	0/0:26,4:31:6.56:0,7,289	0/0:14,1:17:12.84:0,13,174	1/1:7,7:14:5.34:94,5,0	0/1:11,7:20:20.51:129,0,21	0/1:19,6:25:21.32:21,0,186	0/0:27,1:31:40.08:0,40,371	0/0:14,0:18:18.14:0,18,182	0/0:23,3:28:14.78:0,15,359	0/0:17,1:20:28.18:0,28,287	1/1:10,8:23:16.80:125,17,0	1/1:4,2:21:26.36:93,26,0	0/1:17,2:19:6.60:7,0,134	0/1:19,5:25:3.25:3,0,203	0/0:17,0:17:11.11:0,11,166	0/1:11,2:14:6.76:7,0,128	0/1:9,3:12:8.49:8,0,106	0/1:13,2:16:28.40:28,0,52	0/1:8,4:12:23.42:23,0,106	0/0:20,1:21:13.16:0,13,197	0/0:28,2:31:23.39:0,23,333	0/0:11,0:11:26.73:0,27,199
chr10	85913206	.	G	GAA	4141.45	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-1.831;DP=576;FS=3.701;HRun=9;HaplotypeScore=73.9850;InbreedingCoeff=0.9510;MQ=62.58;MQ0=5;MQRankSum=0.605;QD=32.10;ReadPosRankSum=-0.125;VQSLOD=3.8653;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,29:34:69.23:1062,69,0	1/1:0,8:9:23.57:332,24,0	0/0:4,0:2:5.91:0,6,38	0/0:13,0:7:11.72:0,12,126	0/0:36,0:36:75.11:0,75,798	0/0:17,0:17:51.08:0,51,524	1/1:1,14:15:33.07:482,33,0	0/0:33,0:31:78.18:0,78,830	0/0:12,0:12:33.08:0,33,351	1/1:10,20:31:75.19:1051,75,0	1/1:1,17:21:51.07:703,51,0	0/0:25,0:25:69.13:0,69,715	0/0:22,0:22:53.75:0,54,536	0/0:19,0:19:54.10:0,54,566	0/0:25,0:25:66.15:0,66,702	0/0:25,0:25:75.17:0,75,790	1/1:3,13:18:34.36:511,34,0	0/0:21,0:21:60.07:0,60,614	0/0:27,0:27:66.09:0,66,689	0/0:30,0:30:81.16:0,81,847	0/0:14,0:14:33.06:0,33,343	0/0:14,0:14:39.08:0,39,415	0/0:19,0:19:48.08:0,48,501	0/0:2,0:2:6.02:0,6,64	0/0:19,0:19:35.98:0,36,438	0/0:25,1:26:28.99:0,29,713	0/0:24,0:24:60.08:0,60,627	0/0:20,0:20:60.08:0,60,604
chr10	85913863	.	G	GA	2629.13	PASS	AB=0.846;AC=14;AF=0.250;AN=56;BaseQRankSum=-6.739;DP=557;FS=0.415;HRun=10;HaplotypeScore=62.9496;InbreedingCoeff=0.5922;MQ=68.31;MQ0=8;MQRankSum=0.294;QD=13.08;ReadPosRankSum=1.737;VQSLOD=3.4924;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,24:31:63.16:669,63,0	1/1:1,4:6:14.87:142,15,0	0/0:29,0:10:11.72:0,12,85	0/0:31,0:16:17.59:0,18,137	0/0:13,0:15:40.96:0,41,321	0/0:18,0:18:28.47:0,28,325	1/1:0,18:19:47.99:494,48,0	0/1:26,2:28:22.90:23,0,359	0/0:12,0:12:29.93:0,30,243	0/1:5,11:16:16.18:303,0,16	1/1:6,10:16:38.74:368,39,0	0/0:25,2:27:18.88:0,19,357	0/0:13,0:13:14.43:0,14,228	0/0:24,0:24:50.86:0,51,414	0/0:16,0:16:41.88:0,42,340	0/0:21,0:21:53.87:0,54,435	1/1:8,36:44:13.35:758,13,0	0/1:26,1:25:41.70:42,0,312	0/0:23,1:23:22.07:0,22,386	0/1:10,1:11:14.03:14,0,102	0/0:24,0:24:56.93:0,57,468	0/0:9,0:9:20.96:0,21,172	0/0:11,0:10:16.90:0,17,205	0/0:23,0:23:56.89:0,57,461	0/0:15,0:15:19.03:0,19,233	0/0:10,0:10:20.91:0,21,164	0/0:25,4:28:30.85:0,31,456	0/0:4,0:4:8.20:0,8,56
chr10	85913879	.	CAG	C	753.47	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.969;DP=544;FS=0.000;HRun=0;HaplotypeScore=73.0955;InbreedingCoeff=0.8000;MQ=63.17;MQ0=15;MQRankSum=0.059;QD=34.25;ReadPosRankSum=2.625;VQSLOD=5.9803;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:69.24:0,69,1352	0/0:6,0:6:18.04:0,18,327	0/0:25,0:4:11.25:0,11,154	0/0:24,0:8:3.21:0,3,178	0/0:17,0:17:51.16:0,51,996	0/0:24,0:24:69.24:0,69,1384	0/0:21,0:21:51.13:0,51,968	0/0:35,0:32:93.32:0,93,1842	0/0:12,0:12:36.11:0,36,675	0/0:19,0:19:57.19:0,57,1105	0/0:14,0:15:45.11:0,45,850	0/0:24,0:24:63.17:0,63,1209	0/0:14,0:14:41.81:0,42,800	0/0:21,0:21:60.18:0,60,1144	0/0:16,0:16:42.03:0,42,818	0/0:25,0:25:72.21:0,72,1315	0/0:38,0:38:96.27:0,96,1817	1/1:4,18:20:54.13:848,54,0	0/0:24,0:23:69.15:0,69,1239	0/0:10,0:10:30.10:0,30,607	0/0:21,0:21:63.22:0,63,1270	0/0:11,0:10:30.10:0,30,609	0/0:11,0:10:27.08:0,27,511	0/0:20,0:20:57.20:0,57,1155	0/0:14,0:14:42.11:0,42,780	0/0:12,0:11:30.10:0,30,602	0/0:32,0:31:78.21:0,78,1389	0/0:4,0:4:12.04:0,12,244
chr10	85913989	.	T	TGCAGTGTGCTGAGCCCTCTGCC	14930.13	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=2.744;DP=493;FS=18.504;HRun=0;HaplotypeScore=267.4280;InbreedingCoeff=0.9430;MQ=66.89;MQ0=0;MQRankSum=-10.438;QD=55.30;ReadPosRankSum=-3.936;VQSLOD=2.4497;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,5:28:12.04:1221,12,0	1/1:8,1:9:12.04:981,12,0	0/0:17,0:17:24.08:0,24,648	0/0:13,0:14:5.99:0,6,140	0/0:19,0:19:45.15:0,45,2185	0/0:19,0:19:33.10:0,33,1335	1/1:29,0:27:23.98:1079,24,0	1/1:26,0:18:15.03:555,15,0	0/0:15,0:15:30.08:0,30,1251	1/1:24,0:24:24.08:1258,24,0	1/1:14,1:15:12.04:750,12,0	0/0:13,0:13:30.06:0,30,1223	0/0:16,0:16:33.11:0,33,1896	0/0:19,0:19:33.09:0,33,1401	0/0:11,0:11:18.06:0,18,895	0/0:20,0:20:48.16:0,48,2397	1/1:22,2:23:27.04:1974,27,0	1/1:13,2:15:27.09:2075,27,0	1/1:18,0:18:12.04:271,12,0	1/1:14,0:14:9.02:635,9,0	1/1:16,0:15:9.03:395,9,0	0/0:14,0:14:30.10:0,30,1486	0/0:11,0:11:21.07:0,21,1124	0/0:17,0:17:19.31:0,19,1194	0/0:15,0:15:39.13:0,39,2142	1/1:20,0:19:15.05:745,15,0	1/1:18,2:19:21.07:1386,21,0	1/1:10,2:12:18.06:1605,18,0
chr10	85914023	.	C	CT	1689.08	PASS	AB=0.902;AC=29;AF=0.518;AN=56;BaseQRankSum=3.153;DP=422;FS=1.630;HRun=14;HaplotypeScore=83.9271;InbreedingCoeff=0.7007;MQ=62.75;MQ0=2;MQRankSum=-4.514;QD=7.25;ReadPosRankSum=-5.419;VQSLOD=1.4152;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,7:19:9.47:81,9,0	1/1:6,0:6:11.27:55,11,0	0/0:13,0:7:3.05:0,3,20	0/0:5,0:5:2.95:0,3,19	0/0:17,0:19:36.25:0,36,216	0/0:17,2:19:15.02:0,15,223	1/1:5,12:16:25.62:195,26,0	1/1:5,13:16:6.90:282,7,0	0/0:15,0:16:25.57:0,26,160	1/1:13,0:13:24.32:104,24,0	1/1:15,0:15:18.76:93,19,0	0/0:16,1:17:3.10:0,3,147	0/0:13,0:13:29.49:0,29,190	0/1:10,1:12:4.55:5,0,86	0/0:9,0:9:20.62:0,21,135	0/0:24,0:25:25.21:0,25,257	1/1:22,0:21:20.43:169,20,0	1/1:12,1:17:8.52:113,9,0	1/1:6,4:9:9:79,9,0	0/1:10,4:14:5.94:41,0,6	1/1:3,1:4:3.47:27,3,0	0/1:10,0:12:2.69:3,0,82	0/0:13,0:13:29.48:0,29,192	0/0:13,0:16:19.96:0,20,124	0/0:21,0:22:16.54:0,17,102	1/1:6,11:18:35.76:288,36,0	1/1:3,15:18:21:184,21,0	1/1:7,6:13:20.95:175,21,0
chr10	85914037	.	T	TA	1185.30	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=2.899;DP=415;FS=1.771;HRun=2;HaplotypeScore=59.6538;InbreedingCoeff=0.6159;MQ=58.91;MQ0=3;MQRankSum=-2.985;QD=12.22;ReadPosRankSum=2.489;VQSLOD=2.4373;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:26.22:0,26,191	1/1:0,3:5:12:122,12,0	0/0:18,0:8:6.96:0,7,68	0/0:8,0:7:4.97:0,5,58	0/0:17,0:17:44.95:0,45,482	0/0:22,0:22:45.93:0,46,526	0/0:14,0:13:4.18:0,4,75	0/0:22,0:21:13.07:0,13,176	0/0:13,0:13:36.01:0,36,385	1/1:3,11:16:32.95:345,33,0	1/1:6,8:15:24.03:271,24,0	0/0:18,0:18:41.64:0,42,445	0/0:13,0:13:33.07:0,33,376	0/0:14,0:13:32.55:0,33,321	0/0:12,0:12:33.06:0,33,358	0/0:23,0:23:59.57:0,60,592	1/1:9,14:22:53.93:561,54,0	0/0:14,0:14:28.93:0,29,174	0/0:7,0:5:1.18:0,1,18	0/0:10,0:10:25.28:0,25,207	0/0:6,0:6:12.35:0,12,86	0/0:11,0:11:23.98:0,24,249	0/0:14,0:14:39.08:0,39,442	0/0:14,0:14:38.84:0,39,360	0/0:14,0:14:29.98:0,30,303	0/1:18,0:18:16.77:17,0,85	0/1:20,0:20:33.10:33,0,66	0/0:14,0:13:5.80:0,6,112
chr10	85914070	.	T	TC	623.87	PASS	AB=0.900;AC=3;AF=0.054;AN=56;BaseQRankSum=0.390;DP=463;FS=6.922;HRun=1;HaplotypeScore=54.6808;InbreedingCoeff=0.7318;MQ=60.07;MQ0=2;MQRankSum=-3.641;QD=24.00;ReadPosRankSum=1.281;VQSLOD=3.2479;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.14:0,66,879	0/0:6,0:6:18.02:0,18,229	0/0:23,0:11:30.99:0,31,418	0/0:24,0:16:45.12:0,45,597	0/0:13,0:13:36.12:0,36,504	0/0:24,0:24:69.22:0,69,945	0/0:19,0:19:54.09:0,54,710	0/0:27,0:25:75.25:0,75,1043	0/1:8,0:9:2.79:3,0,293	0/0:18,0:18:54.18:0,54,755	0/0:8,0:8:24.08:0,24,336	0/0:20,0:20:54.16:0,54,720	0/0:12,0:12:33.11:0,33,459	0/0:13,0:13:39.13:0,39,546	0/0:9,0:9:27.08:0,27,361	0/0:16,0:16:48.16:0,48,672	0/0:26,0:25:63.18:0,63,860	1/1:1,16:17:45.15:718,45,0	0/0:13,0:13:39.13:0,39,546	0/0:23,0:23:63.20:0,63,864	0/0:13,0:13:36.10:0,36,485	0/0:9,0:9:27.09:0,27,377	0/0:16,0:16:45.14:0,45,612	0/0:13,0:13:27.09:0,27,378	0/0:11,0:11:27.09:0,27,378	0/0:19,0:18:54.18:0,54,754	0/0:24,0:24:54.14:0,54,732	0/0:12,0:12:30.10:0,30,420
chr10	85914256	.	C	CA	367.09	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.666;DP=644;FS=4.430;HRun=3;HaplotypeScore=72.2214;InbreedingCoeff=0.9984;MQ=89.15;MQ0=0;MQRankSum=-2.879;QD=26.22;ReadPosRankSum=-0.614;VQSLOD=2.6004;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:99:0,132,1568	0/0:9,0:9:27.05:0,27,308	0/0:27,0:27:69.11:0,69,773	0/0:22,0:22:54.15:0,54,620	0/0:21,0:21:57.17:0,57,683	0/0:26,0:26:72.14:0,72,825	0/0:19,0:19:54.14:0,54,624	0/0:28,0:28:78.22:0,78,919	0/0:17,0:17:48.15:0,48,574	0/0:28,0:28:72.19:0,72,836	0/0:15,0:15:45.14:0,45,540	0/0:26,0:26:75.23:0,75,899	0/0:23,0:23:66.20:0,66,791	0/0:20,0:20:57.17:0,57,684	0/0:37,0:37:99:0,111,1321	0/0:33,0:33:93.26:0,93,1093	0/0:29,0:29:84.23:0,84,993	1/1:2,12:14:33.11:462,33,0	0/0:24,0:24:63.18:0,63,743	0/0:19,0:19:51.14:0,51,601	0/0:20,0:20:57.17:0,57,682	0/0:17,0:17:45.12:0,45,528	0/0:17,0:17:48.12:0,48,553	0/0:17,0:17:42.11:0,42,491	0/0:11,0:11:33.10:0,33,396	0/0:31,0:31:90.23:0,90,1055	0/0:26,0:26:66.19:0,66,780	0/0:18,0:18:54.17:0,54,647
chr10	85914686	.	C	CT	2213.64	PASS	AB=0.708;AC=23;AF=0.411;AN=56;BaseQRankSum=-4.682;DP=340;FS=11.098;HRun=13;HaplotypeScore=41.9248;InbreedingCoeff=0.6197;MQ=53.83;MQ0=8;MQRankSum=-2.916;QD=11.47;ReadPosRankSum=-2.973;VQSLOD=1.0963;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,9:15:27.50:251,28,0	1/1:3,1:4:3:28,3,0	0/0:6,0:6:1.99:0,2,6	0/0:5,0:4:2.94:0,3,18	0/0:14,0:14:14.47:0,14,102	0/0:15,0:15:26.73:0,27,185	0/1:5,2:7:8.60:64,0,9	1/1:13,21:31:3.11:380,3,0	0/0:13,0:13:32.69:0,33,225	1/1:4,6:10:15.02:139,15,0	0/1:8,5:14:33.75:93,0,34	0/0:12,0:12:20.79:0,21,143	0/0:10,0:10:14.76:0,15,101	0/0:9,0:9:9.78:0,10,62	0/0:10,0:10:23.67:0,24,159	0/0:5,0:5:11.90:0,12,82	1/1:6,12:19:35.71:306,36,0	0/0:5,0:15:24.43:0,24,72	1/1:11,11:22:16.23:239,16,0	0/1:5,6:11:7.61:72,0,8	1/1:2,3:5:9.01:84,9,0	0/0:2,0:2:5.93:0,6,39	0/0:11,0:11:23.78:0,24,163	0/0:4,0:4:5.93:0,6,40	0/0:11,0:10:26.75:0,27,183	1/1:6,14:19:32.97:292,33,0	1/1:7,6:13:3.36:164,3,0	1/1:5,10:15:33:298,33,0
chr10	85915619	.	TAAC	T	3476.06	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=11.013;DP=864;FS=7.534;HRun=0;HaplotypeScore=120.3080;InbreedingCoeff=0.9997;MQ=83.63;MQ0=0;MQRankSum=-3.189;QD=40.42;ReadPosRankSum=2.358;VQSLOD=5.1644;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,53:57:99:2155,132,0	0/0:12,0:12:33.11:0,33,719	0/0:30,0:29:78.27:0,78,1684	0/0:31,0:31:71.63:0,72,1569	0/0:30,0:30:81.28:0,81,1731	0/0:28,0:28:84.15:0,84,1807	1/1:0,29:29:81.28:1321,81,0	0/0:42,0:42:99:0,114,2501	0/0:36,0:36:99:0,102,2201	0/0:24,0:24:57.20:0,57,1261	0/0:25,0:25:72.24:0,72,1551	0/0:47,0:47:99:0,135,2937	0/0:37,0:37:99:0,108,2389	0/0:34,0:34:99:0,99,2193	0/0:40,0:40:99:0,120,2606	0/0:34,0:34:99:0,99,2193	0/0:36,0:36:99:0,108,2259	0/0:30,0:30:84.26:0,84,1826	0/0:22,0:22:66.23:0,66,1460	0/0:30,0:30:78.27:0,78,1705	0/0:31,0:31:90.31:0,90,1949	0/0:27,0:27:72.24:0,72,1567	0/0:20,0:20:60.21:0,60,1339	0/0:35,0:35:99:0,105,2283	0/0:12,0:12:33.11:0,33,737	0/0:35,0:35:99:0,102,2239	0/0:34,0:34:96.33:0,96,2125	0/0:16,0:16:45.15:0,45,1005
chr10	85917264	.	TCTGGGTTCGATC	T	10542.43	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.663;DP=639;FS=3.473;HRun=0;HaplotypeScore=221.0526;InbreedingCoeff=0.9927;MQ=69.77;MQ0=0;MQRankSum=-13.370;QD=78.67;ReadPosRankSum=0.597;VQSLOD=4.5155;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,5710	0/0:7,0:7:21.07:0,21,1195	0/0:16,0:16:42.12:0,42,1948	0/0:9,0:9:24.08:0,24,1181	0/0:31,0:31:93.32:0,93,5391	0/0:29,0:29:87.30:0,87,4841	0/0:21,0:21:57.20:0,57,3306	1/1:0,17:16:48.06:1337,48,0	0/0:27,0:27:81.28:0,81,4682	0/0:20,0:20:57.17:0,57,3071	0/0:19,0:19:54.19:0,54,3169	0/0:20,0:20:60.21:0,60,3519	0/0:24,0:24:69.24:0,69,4024	0/0:26,0:26:78.26:0,78,4459	0/0:29,0:29:78.27:0,78,4750	0/0:32,0:32:93.29:0,93,4901	0/0:33,0:33:93.28:0,93,5332	0/0:20,0:20:60.21:0,60,3661	1/1:0,10:9:26.98:663,27,0	1/1:0,24:24:54.18:1899,54,0	1/1:0,18:18:24.08:836,24,0	0/0:21,0:21:60.17:0,60,3006	0/0:23,0:23:63.22:0,63,3663	0/0:38,0:38:99:0,111,6436	0/0:25,0:25:75.26:0,75,4353	1/1:0,29:29:81.17:2668,81,0	1/1:2,29:31:75.24:2685,75,0	1/1:1,4:5:12.04:456,12,0
chr10	85917360	.	A	ATT	2587.30	PASS	AB=0.605;AC=12;AF=0.214;AN=56;BaseQRankSum=1.282;DP=659;FS=7.698;HRun=11;HaplotypeScore=94.2577;InbreedingCoeff=0.7576;MQ=65.80;MQ0=0;MQRankSum=-2.024;QD=13.91;ReadPosRankSum=0.785;VQSLOD=2.0906;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:9,2:40:8.11:224,0,8	1/1:3,7:10:13.75:151,14,0	0/0:14,0:12:11.98:0,12,113	0/0:11,0:11:6.01:0,6,107	0/0:23,0:25:49.63:0,50,485	0/0:25,0:28:74.30:0,74,669	1/1:4,2:25:43.55:216,44,0	0/0:33,0:34:49.84:0,50,525	0/0:8,0:9:14.74:0,15,128	1/1:10,11:24:12.87:419,13,0	1/1:7,19:28:53.58:685,54,0	0/0:21,0:22:59.78:0,60,554	0/0:20,0:20:35.48:0,35,310	0/0:10,0:11:26.75:0,27,239	0/0:21,0:22:41.72:0,42,384	0/0:26,0:27:62.77:0,63,588	1/1:2,33:37:74.22:1016,74,0	0/1:9,0:22:55.16:55,0,86	0/0:20,0:21:9.91:0,10,279	0/0:32,0:35:75.96:0,76,696	0/0:21,0:23:34.40:0,34,324	0/0:20,0:20:39.02:0,39,376	0/0:20,0:20:47.75:0,48,441	0/0:24,0:24:60.05:0,60,574	0/0:18,0:21:41.46:0,41,423	0/0:29,0:33:74.20:0,74,719	0/0:36,0:37:68.71:0,69,651	0/0:15,0:15:33.01:0,33,320
chr10	85917984	.	CT	C	502.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.105;DP=587;FS=5.500;HRun=3;HaplotypeScore=73.7471;InbreedingCoeff=0.9740;MQ=71.81;MQ0=1;MQRankSum=-0.105;QD=29.56;ReadPosRankSum=0.950;VQSLOD=3.0272;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:30.57:0,31,281	0/0:9,0:9:18:0,18,84	0/0:22,0:19:28.40:0,28,278	0/0:19,0:14:16.31:0,16,255	0/0:31,0:31:87.17:0,87,1056	0/0:21,0:21:48.60:0,49,643	0/0:19,0:19:32.69:0,33,239	0/0:20,0:20:46.50:0,46,538	0/0:18,0:18:48.13:0,48,648	0/0:24,0:24:35.88:0,36,324	0/0:21,0:21:45.45:0,45,232	0/0:18,0:18:40.90:0,41,562	0/0:26,0:26:68.13:0,68,806	0/0:18,0:18:51.36:0,51,593	0/0:38,0:38:96.11:0,96,1146	0/0:17,0:17:46.48:0,46,515	0/0:29,0:28:41.80:0,42,208	1/1:2,15:17:51.13:597,51,0	0/0:16,0:16:33.09:0,33,439	0/0:18,0:18:54.11:0,54,663	0/0:15,0:15:42.10:0,42,533	0/0:8,0:8:23.03:0,23,246	0/0:23,0:23:61.92:0,62,706	0/0:15,0:15:39.04:0,39,464	0/0:17,0:17:42.07:0,42,518	0/0:31,0:31:81.60:0,82,942	0/0:24,0:24:69.06:0,69,796	0/0:11,0:11:24.06:0,24,304
chr10	85917987	.	TA	T	1894.37	PASS	AB=0.856;AC=17;AF=0.304;AN=56;BaseQRankSum=7.979;DP=592;FS=0.818;HRun=13;HaplotypeScore=68.9269;InbreedingCoeff=0.6540;MQ=73.88;MQ0=1;MQRankSum=1.300;QD=7.64;ReadPosRankSum=3.177;VQSLOD=2.6995;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,29:42:89.33:606,89,0	1/1:2,7:9:20.87:153,21,0	0/1:22,1:20:5.13:5,0,85	0/1:19,0:15:3.83:4,0,106	0/0:30,1:31:59.93:0,60,552	0/0:16,1:18:26.15:0,26,406	0/1:7,12:19:2.38:148,0,2	0/0:18,1:19:14.15:0,14,299	0/0:23,0:23:59.51:0,60,517	1/1:8,15:24:37.78:268,38,0	1/1:5,17:23:40.68:290,41,0	0/0:17,0:18:23.09:0,23,319	0/0:21,2:24:32.01:0,32,458	0/0:16,1:17:14.14:0,14,292	0/0:35,2:37:28.23:0,28,574	0/0:18,1:20:16.96:0,17,299	1/1:5,21:28:54.75:384,55,0	1/1:18,0:18:26.02:179,26,0	0/0:14,0:14:30.04:0,30,287	0/0:18,0:18:36.01:0,36,341	0/0:15,0:15:39.05:0,39,375	0/1:7,1:8:6.89:7,0,102	0/0:23,1:24:26:0,26,388	0/0:15,0:15:24.04:0,24,234	0/0:13,0:14:32.87:0,33,298	0/1:27,5:33:40.59:41,0,438	0/0:26,0:26:47.97:0,48,433	0/0:11,0:11:21.02:0,21,199
chr10	85918873	.	AAC	A	1594.87	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=6.180;DP=613;FS=0.406;HRun=0;HaplotypeScore=93.0299;InbreedingCoeff=0.8909;MQ=74.62;MQ0=2;MQRankSum=1.005;QD=12.08;ReadPosRankSum=0.055;VQSLOD=3.3667;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:38,3:41:37.47:564,37,0	0/1:10,0:10:3.64:58,0,4	0/0:41,1:29:49.61:0,50,567	0/0:34,0:21:24.69:0,25,267	0/0:27,0:27:62.63:0,63,896	0/0:22,0:22:65.94:0,66,882	1/1:14,1:15:24.26:249,24,0	0/0:30,0:28:84.10:0,84,998	0/0:18,0:18:45.88:0,46,589	1/1:24,0:24:44.75:408,45,0	1/1:17,1:18:10.19:174,10,0	0/0:29,0:29:63.74:0,64,836	0/0:23,0:23:58.61:0,59,887	0/0:24,0:24:62.92:0,63,809	0/0:20,0:20:51.89:0,52,694	0/0:27,0:27:74.93:0,75,1067	1/1:24,0:24:50.88:317,51,0	0/0:17,0:16:7.12:0,7,79	0/0:29,0:27:80.82:0,81,1043	0/0:18,0:18:50.81:0,51,627	0/0:13,0:13:36.36:0,36,403	0/0:8,0:8:24:0,24,333	0/0:14,0:14:42.05:0,42,579	0/0:34,0:34:95.99:0,96,1239	0/0:14,0:14:39.59:0,40,610	0/0:18,0:18:53.93:0,54,632	0/0:15,0:15:41.98:0,42,603	0/0:5,0:5:14.94:0,15,175
chr10	85918874	.	AC	A	3135.64	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=4.755;DP=611;FS=1.660;HRun=2;HaplotypeScore=76.8052;InbreedingCoeff=0.9912;MQ=74.67;MQ0=2;MQRankSum=0.144;QD=21.19;ReadPosRankSum=-0.254;VQSLOD=3.4565;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,15:41:99:993,112,0	1/1:2,7:10:21.63:242,22,0	0/0:42,0:29:57.59:0,58,492	0/0:34,0:21:15.78:0,16,190	0/0:26,0:26:71.34:0,71,663	0/0:22,0:22:60.49:0,60,614	1/1:14,2:16:42.25:335,42,0	0/0:30,0:28:81.02:0,81,771	0/0:21,0:21:43.62:0,44,492	1/1:0,22:22:65.96:607,66,0	1/1:2,16:18:41.63:376,42,0	0/0:28,0:28:22.76:0,23,573	0/0:22,0:22:62.99:0,63,654	0/0:23,0:23:56.67:0,57,530	0/0:21,0:21:53.82:0,54,527	0/0:26,0:26:58.77:0,59,724	1/1:16,7:24:71.82:658,72,0	1/1:16,1:16:23.42:124,23,0	0/0:28,0:27:73.87:0,74,763	0/0:18,0:18:48.94:0,49,466	0/0:13,0:13:34.08:0,34,287	0/0:8,0:8:23.40:0,23,229	0/0:14,0:14:42.01:0,42,439	0/0:34,0:34:96.93:0,97,949	0/0:14,0:14:42.06:0,42,463	0/0:18,0:18:49.56:0,50,438	0/0:15,0:15:40.83:0,41,433	0/0:5,0:5:13.21:0,13,117
chr10	85919067	.	A	AT	4134.28	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-11.205;DP=409;FS=1.940;HRun=8;HaplotypeScore=37.5128;InbreedingCoeff=0.8551;MQ=63.71;MQ0=4;MQRankSum=-0.727;QD=22.23;ReadPosRankSum=0.528;VQSLOD=3.5880;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:28:54.15:623,54,0	0/0:2,0:2:6:0,6,55	0/0:11,0:3:8.93:0,9,68	0/1:11,0:8:5.21:5,0,22	0/0:20,0:20:57.02:0,57,518	0/0:14,0:14:42.02:0,42,384	1/1:2,4:5:6.02:69,6,0	1/1:8,25:31:72.17:816,72,0	0/0:11,0:11:30.02:0,30,274	0/0:15,0:15:45.01:0,45,406	0/0:20,0:20:60.02:0,60,544	0/0:14,0:14:36.01:0,36,325	0/0:11,0:11:33.02:0,33,302	0/0:8,0:8:21.01:0,21,192	0/0:16,0:16:39.01:0,39,357	0/0:17,0:17:36.02:0,36,329	0/0:32,0:32:62.99:0,63,565	1/1:4,16:20:36.11:415,36,0	1/1:7,9:15:5.52:294,6,0	1/1:2,4:6:11.96:114,12,0	1/1:2,9:11:24.07:277,24,0	0/0:5,0:5:11.98:0,12,104	0/0:5,0:5:12:0,12,110	0/0:4,0:4:6:0,6,55	0/0:18,0:18:48.03:0,48,439	1/1:2,17:19:54.16:620,54,0	1/1:3,21:24:57.17:658,57,0	1/1:3,9:12:21.06:242,21,0
chr10	85920686	.	T	TC	451.11	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.111;DP=575;FS=2.381;HRun=3;HaplotypeScore=67.4429;InbreedingCoeff=0.9771;MQ=81.36;MQ0=0;MQRankSum=-2.804;QD=32.22;ReadPosRankSum=1.043;VQSLOD=4.0093;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.25:0,81,972	0/0:14,0:14:42.12:0,42,492	0/0:19,0:19:48.11:0,48,549	0/0:12,0:12:21.04:0,21,238	0/0:13,0:13:39.12:0,39,466	0/0:16,0:16:42.12:0,42,493	0/0:36,0:36:96.27:0,96,1139	0/0:28,0:28:75.21:0,75,879	0/0:21,0:21:60.18:0,60,719	0/0:24,0:24:69.21:0,69,827	0/0:10,0:10:24.07:0,24,280	0/0:19,0:19:54.17:0,54,648	0/0:15,0:15:45.14:0,45,540	0/0:25,0:25:72.22:0,72,864	0/0:25,0:25:75.21:0,75,887	0/0:33,0:33:96.29:0,96,1152	0/0:15,0:15:36.09:0,36,420	1/1:0,14:14:39.13:546,39,0	0/0:20,0:20:48.14:0,48,573	0/0:21,0:21:48.14:0,48,576	0/0:38,0:38:96.29:0,96,1152	0/0:13,0:13:33.10:0,33,396	0/0:12,0:12:30.08:0,30,345	0/0:31,0:31:87.22:0,87,1027	0/0:11,0:11:30.09:0,30,357	0/0:32,0:32:90.27:0,90,1070	0/0:23,0:23:69.21:0,69,828	0/0:5,0:5:15.05:0,15,179
chr10	85922055	.	GGCA	G	855.43	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=7.421;DP=228;FS=4.249;HRun=0;HaplotypeScore=49.6983;InbreedingCoeff=0.6845;MQ=62.52;MQ0=1;MQRankSum=-1.423;QD=12.77;ReadPosRankSum=2.262;VQSLOD=2.8631;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:33.55:0,34,467	1/1:1,2:3:9.01:93,9,0	0/0:15,0:7:15.04:0,15,254	0/1:17,0:9:10.14:10,0,148	0/0:9,0:9:24.07:0,24,340	0/0:6,0:6:12.04:0,12,160	0/0:12,0:12:22.35:0,22,256	0/0:12,0:12:29.63:0,30,364	0/0:3,0:3:9.03:0,9,158	1/1:6,0:6:16.75:126,17,0	1/1:5,2:7:14.74:100,15,0	0/0:11,0:11:27.09:0,27,445	0/0:1,0:1:3.01:0,3,60	0/0:7,0:7:14.68:0,15,199	0/0:9,0:9:20.85:0,21,292	0/0:11,0:11:30:0,30,365	1/1:10,8:16:46.80:418,47,0	1/1:12,0:9:27:275,27,0	0/0:8,0:8:17.61:0,18,188	0/1:4,0:4:3.79:4,0,70	0/0:2,0:2:6.02:0,6,77	0/0:3,0:3:9.03:0,9,137	0/0:8,0:8:21.07:0,21,335	0/0:6,0:5:8.59:0,9,112	0/0:7,0:7:14.97:0,15,201	0/0:7,0:7:21.05:0,21,297	0/0:7,0:7:15.04:0,15,202	0/0:2,0:2:5.69:0,6,57
chr10	85922056	.	GCA	G	981.89	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=7.416;DP=234;FS=7.660;HRun=0;HaplotypeScore=46.4693;InbreedingCoeff=0.7147;MQ=62.60;MQ0=1;MQRankSum=-3.074;QD=15.34;ReadPosRankSum=3.048;VQSLOD=2.5331;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:38.57:0,39,516	1/1:3,0:3:9.01:93,9,0	0/0:16,0:7:15.04:0,15,244	0/1:17,0:9:5.18:5,0,152	0/0:9,0:9:24.03:0,24,317	0/0:7,0:7:15.05:0,15,215	0/0:12,0:12:17.48:0,17,174	0/0:13,0:13:16.56:0,17,374	0/0:3,0:3:9.03:0,9,145	1/1:5,1:6:17.17:132,17,0	1/1:5,1:7:14.90:128,15,0	0/0:9,0:9:27.09:0,27,400	0/0:1,0:1:3.01:0,3,49	0/0:8,0:8:14.71:0,15,197	0/0:9,0:9:13.71:0,14,280	0/0:10,0:11:26.55:0,27,288	1/1:15,3:16:47.58:461,48,0	1/1:5,8:10:29.59:331,30,0	0/0:8,0:8:5.63:0,6,147	0/0:4,0:4:8.21:0,8,75	0/0:2,0:2:5.95:0,6,65	0/0:4,0:4:11.78:0,12,158	0/0:8,0:8:21.07:0,21,316	0/0:6,0:5:5.75:0,6,74	0/0:8,0:8:17.97:0,18,234	0/0:7,0:7:20.90:0,21,282	0/0:7,0:7:14.84:0,15,189	0/0:3,0:3:3.29:0,3,87
chr10	85922105	.	GA	G	2428.13	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.993;DP=463;FS=15.765;HRun=9;HaplotypeScore=59.6407;InbreedingCoeff=0.9895;MQ=79.80;MQ0=1;MQRankSum=-2.903;QD=20.93;ReadPosRankSum=2.820;VQSLOD=2.8583;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:66.03:604,66,0	1/1:1,4:5:12:110,12,0	0/0:36,0:27:51.05:0,51,430	0/0:31,0:20:20.86:0,21,240	0/0:21,1:22:60.15:0,60,674	0/0:8,0:8:24.07:0,24,277	1/1:1,19:20:45.02:412,45,0	0/0:23,0:23:42.11:0,42,469	0/0:14,0:15:44.97:0,45,499	1/1:2,14:16:44.96:403,45,0	1/1:1,11:12:36.02:329,36,0	0/0:14,0:14:39.05:0,39,424	0/0:10,0:10:30.09:0,30,346	0/0:20,0:20:54.16:0,54,618	0/0:12,0:12:36.11:0,36,415	0/0:17,0:17:45.05:0,45,502	1/1:1,16:16:45.02:412,45,0	1/1:1,16:16:39.02:357,39,0	0/0:20,0:20:60.15:0,60,665	0/0:15,1:16:17.63:0,18,442	0/0:15,0:15:39.12:0,39,450	0/0:12,0:12:33.10:0,33,377	0/0:14,0:14:39.12:0,39,450	0/0:11,0:10:24.03:0,24,262	0/0:16,0:16:48.14:0,48,554	0/0:16,0:16:45.13:0,45,518	0/0:11,0:13:35.77:0,36,375	0/0:6,0:6:18.05:0,18,208
chr10	85923874	.	T	TAAA	1507.41	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=0.293;DP=489;FS=0.620;HRun=13;HaplotypeScore=82.6986;InbreedingCoeff=0.8182;MQ=52.90;MQ0=8;MQRankSum=-2.628;QD=16.21;ReadPosRankSum=-2.375;VQSLOD=1.9666;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:44.70:0,45,619	1/1:2,5:8:15.05:245,15,0	0/0:8,0:3:5.96:0,6,60	0/0:7,0:4:9.39:0,9,71	0/0:31,0:34:56.44:0,56,594	0/0:18,0:18:32.85:0,33,353	0/0:9,0:9:14.83:0,15,139	0/0:25,0:24:45.96:0,46,456	0/0:9,0:10:10.45:0,10,126	1/1:5,17:26:51.09:802,51,0	1/1:6,7:15:12.02:179,12,0	0/0:20,0:22:22.07:0,22,440	0/0:15,0:16:26.91:0,27,267	0/0:19,0:19:48.03:0,48,513	0/0:24,0:24:61.90:0,62,649	0/0:17,0:17:47.75:0,48,479	1/1:7,11:18:29.93:433,30,0	0/0:3,0:7:14.69:0,15,88	0/0:20,0:22:37.26:0,37,382	0/0:21,0:21:49.43:0,49,520	0/0:11,0:9:20.99:0,21,226	0/0:5,0:5:12.03:0,12,128	0/0:8,0:10:19.45:0,19,200	0/0:8,0:7:18.04:0,18,194	0/0:18,0:18:42.10:0,42,448	0/1:23,0:22:4.68:5,0,319	0/0:31,0:33:61.47:0,61,682	0/0:10,0:10:20.78:0,21,204
chr10	85924363	.	A	AG	934.56	PASS	AB=0.923;AC=8;AF=0.143;AN=56;BaseQRankSum=-0.104;DP=606;FS=5.184;HRun=0;HaplotypeScore=81.9896;InbreedingCoeff=0.5950;MQ=60.40;MQ0=23;MQRankSum=6.598;QD=7.60;ReadPosRankSum=2.032;VQSLOD=3.2473;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:62.14:0,62,495	0/1:9,2:10:17.61:133,0,18	0/0:39,0:11:4.63:0,5,88	0/1:36,0:16:20.17:20,0,115	0/0:22,0:22:55.26:0,55,457	0/0:25,0:24:61.83:0,62,493	0/0:20,0:19:47.78:0,48,408	0/0:27,0:27:61.47:0,61,451	0/0:12,0:12:29.50:0,29,243	1/1:1,15:18:29.01:388,29,0	1/1:2,14:19:17.31:198,17,0	0/0:17,0:17:36.29:0,36,246	0/0:21,0:20:49.54:0,50,358	0/0:10,0:10:18.73:0,19,147	0/0:20,0:18:47.88:0,48,395	0/0:24,0:24:57.48:0,57,441	1/1:6,31:38:1.23:338,1,0	0/0:19,0:19:42.70:0,43,269	0/0:21,0:21:55.93:0,56,414	0/0:18,0:17:32.88:0,33,267	0/0:9,0:7:13.99:0,14,102	0/0:12,0:12:32.13:0,32,249	0/0:14,0:14:22.95:0,23,172	0/0:21,0:20:42.89:0,43,328	0/0:23,0:22:60.92:0,61,471	0/0:34,0:33:78.70:0,79,582	0/0:20,0:19:32.92:0,33,290	0/0:13,0:13:26.33:0,26,185
chr10	85925375	.	GTCT	G	3860.23	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.491;DP=736;FS=0.953;HRun=0;HaplotypeScore=119.8020;InbreedingCoeff=0.9991;MQ=58.50;MQ0=9;MQRankSum=-0.069;QD=43.87;ReadPosRankSum=2.988;VQSLOD=5.4582;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,102,2305	1/1:0,9:9:27.09:460,27,0	0/0:21,0:12:36.12:0,36,803	0/0:28,0:10:24.08:0,24,534	0/0:44,0:44:99:0,132,3042	0/0:34,0:33:99:0,99,2281	0/0:16,0:16:48.16:0,48,1106	0/0:35,0:35:99:0,102,2317	0/0:18,0:18:51.18:0,51,1176	1/1:0,28:28:84.27:1406,84,0	1/1:0,22:23:51.17:870,51,0	0/0:18,0:18:51.18:0,51,1176	0/0:22,0:22:63.20:0,63,1403	0/0:19,0:19:57.20:0,57,1294	0/0:38,0:38:99:0,108,2491	0/0:23,0:23:69.24:0,69,1590	1/1:0,28:28:66.23:1124,66,0	0/0:21,0:21:51.18:0,51,1175	0/0:17,0:15:36.12:0,36,815	0/0:33,0:33:99:0,99,2276	0/0:33,0:33:99:0,99,2220	0/0:45,0:45:99:0,129,2967	0/0:21,0:21:63.22:0,63,1444	0/0:32,0:32:96.33:0,96,2206	0/0:19,0:19:57.20:0,57,1299	0/0:31,0:31:93.32:0,93,2129	0/0:25,0:25:72.25:0,72,1650	0/0:15,0:15:45.12:0,45,959
chr10	85928862	.	A	AT	2519.42	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.389;DP=560;FS=0.000;HRun=8;HaplotypeScore=59.7392;InbreedingCoeff=0.9849;MQ=71.99;MQ0=0;MQRankSum=-0.520;QD=25.45;ReadPosRankSum=1.493;VQSLOD=4.3477;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:30:50.92:0,51,149	1/1:2,8:10:18.04:199,18,0	0/0:14,0:12:15.07:0,15,165	0/0:21,0:20:41.93:0,42,333	0/0:27,0:27:81.04:0,81,741	0/0:19,0:19:54.03:0,54,493	0/0:1,0:7:12.22:0,12,36	0/0:28,0:28:59.98:0,60,549	0/0:21,0:21:57.02:0,57,521	1/1:1,18:19:54.11:591,54,0	1/1:1,16:17:45.13:519,45,0	0/0:14,0:14:39.02:0,39,357	0/0:19,0:19:47.06:0,47,418	0/0:15,0:15:42.02:0,42,384	0/0:21,0:21:53.98:0,54,483	0/0:10,0:10:24.01:0,24,220	1/1:3,17:19:48.14:554,48,0	1/1:5,28:33:72.21:831,72,0	0/0:18,0:18:41.99:0,42,378	0/0:26,0:26:75.04:0,75,686	0/0:9,0:9:17.99:0,18,160	0/0:11,0:11:30.02:0,30,274	0/0:22,0:22:60.02:0,60,549	0/0:10,0:10:27.01:0,27,247	0/0:27,0:27:72.02:0,72,653	0/0:44,0:44:99:0,111,1016	0/0:27,0:27:75.02:0,75,680	0/0:20,0:20:51.03:0,51,467
chr10	85929024	.	GCGAGGCGGTAAGAC	G	3962.01	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.608;DP=660;FS=0.667;HRun=0;HaplotypeScore=248.7671;InbreedingCoeff=0.9985;MQ=79.63;MQ0=0;MQRankSum=-9.421;QD=70.75;ReadPosRankSum=1.901;VQSLOD=3.3447;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,22:29:36.12:1521,36,0	0/0:9,0:9:27.09:0,27,1642	0/0:16,0:16:42.14:0,42,1882	0/0:17,0:17:39.13:0,39,1897	0/0:24,0:24:69.22:0,69,4403	0/0:19,0:19:54.17:0,54,3318	1/1:2,25:27:60.21:2441,60,0	0/0:23,0:23:66.23:0,66,4041	0/0:26,0:26:78.25:0,78,4878	0/0:21,0:21:60.21:0,60,3943	0/0:14,0:14:42.14:0,42,2891	0/0:38,0:38:99:0,111,6906	0/0:25,0:25:72.23:0,72,4510	0/0:33,0:33:99:0,99,6687	0/0:22,0:22:63.22:0,63,4149	0/0:20,0:20:57.18:0,57,3762	0/0:42,0:42:99:0,123,8303	0/0:29,0:29:87.30:0,87,4923	0/0:16,0:16:45.15:0,45,2780	0/0:18,0:18:54.19:0,54,3695	0/0:52,0:52:99:0,154,9599	0/0:10,0:10:27.09:0,27,1752	0/0:10,0:10:30.10:0,30,2012	0/0:46,0:46:99:0,129,8828	0/0:22,0:22:63.20:0,63,4168	0/0:26,0:26:72.25:0,72,4566	0/0:14,0:14:42.14:0,42,2627	0/0:12,0:12:36.12:0,36,2344
chr10	85929875	.	A	AT	1077.30	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-7.569;DP=661;FS=5.673;HRun=10;HaplotypeScore=67.5197;InbreedingCoeff=0.7897;MQ=74.02;MQ0=0;MQRankSum=-0.252;QD=17.38;ReadPosRankSum=-0.679;VQSLOD=4.0247;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:31:72.18:768,72,0	0/0:12,1:13:3.97:0,4,238	0/0:15,0:14:20.92:0,21,169	0/1:12,0:13:0.79:1,0,109	0/0:27,0:27:68.89:0,69,562	0/0:25,1:26:27.93:0,28,436	1/1:4,14:18:25.09:430,25,0	0/0:30,0:30:74.86:0,75,608	0/0:18,0:18:44.95:0,45,369	0/0:33,0:33:83.88:0,84,686	0/0:29,0:30:79.64:0,80,630	0/0:24,0:24:53.87:0,54,435	0/0:25,0:25:65.89:0,66,541	0/0:29,0:29:71.91:0,72,591	0/0:29,0:29:77.83:0,78,631	0/0:27,0:27:71.90:0,72,588	0/0:27,0:27:77.86:0,78,632	0/0:26,0:26:62.89:0,63,513	0/0:20,1:21:9.59:0,10,267	0/0:21,0:21:56.93:0,57,468	0/0:18,0:18:50.91:0,51,415	0/0:11,0:11:23.95:0,24,194	0/0:17,0:17:44.94:0,45,369	0/0:30,0:31:73.90:0,74,591	0/0:29,0:29:80.89:0,81,663	0/0:29,0:29:68.89:0,69,563	0/0:26,1:27:46.15:0,46,490	0/0:16,0:16:38.93:0,39,319
chr10	85930558	.	CT	C	1998.33	PASS	AB=0.878;AC=22;AF=0.393;AN=56;BaseQRankSum=4.928;DP=543;FS=6.334;HRun=13;HaplotypeScore=80.1777;InbreedingCoeff=0.5009;MQ=79.18;MQ0=6;MQRankSum=-1.441;QD=7.96;ReadPosRankSum=0.294;VQSLOD=2.7194;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:42.63:0,43,648	1/1:6,0:6:10.44:47,10,0	0/0:48,2:30:13.68:0,14,203	0/0:23,0:7:7.62:0,8,70	0/1:11,1:13:17.29:17,0,191	0/0:12,1:13:7.96:0,8,220	0/0:20,2:23:18.19:0,18,310	1/1:15,10:25:24.34:334,24,0	0/0:10,2:12:5.12:0,5,207	0/1:19,0:19:20.12:65,0,20	0/1:17,1:18:36.62:39,0,37	0/0:10,0:13:30.15:0,30,243	0/1:12,0:13:19.85:20,0,130	0/0:20,0:20:38.08:0,38,351	0/0:20,0:26:47.53:0,48,404	0/0:15,0:17:28.84:0,29,310	1/1:23,1:24:30.77:116,31,0	0/0:14,0:20:37.05:0,37,203	0/1:4,7:12:27.70:129,0,28	1/1:11,9:22:48.72:332,49,0	1/1:7,7:14:23.79:172,24,0	0/0:15,0:15:15.28:0,15,269	0/1:19,2:23:6.65:7,0,318	0/0:10,0:10:23.94:0,24,215	0/0:8,0:8:18.01:0,18,166	1/1:9,10:19:6.57:211,7,0	1/1:11,18:31:75.47:524,75,0	1/1:4,7:12:26.53:186,27,0
chr10	85930570	.	TTC	T	454.20	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=5.107;DP=575;FS=18.931;HRun=0;HaplotypeScore=102.5210;InbreedingCoeff=0.4060;MQ=75.08;MQ0=7;MQRankSum=1.594;QD=2.99;ReadPosRankSum=-0.622;VQSLOD=0.9156;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:95.83:0,96,1389	1/1:5,0:5:6.07:19,6,0	0/0:54,0:28:33.40:0,33,428	0/0:36,0:14:16.27:0,16,288	0/0:11,0:11:19.04:0,19,360	0/0:12,0:12:35.99:0,36,510	0/0:20,0:20:43.18:0,43,720	0/0:28,0:28:14.29:0,14,395	0/0:11,0:11:29.95:0,30,428	1/1:20,1:21:0.71:174,1,0	0/1:19,0:19:16.15:143,0,16	0/0:16,0:16:44.46:0,44,573	0/0:14,0:14:36.36:0,36,415	0/0:19,0:19:54.16:0,54,832	0/0:26,0:26:69.18:0,69,986	0/0:18,0:18:49.85:0,50,664	1/1:19,3:22:31.12:218,31,0	0/1:24,0:21:21.37:21,0,59	0/0:14,0:14:31.42:0,31,253	0/1:30,0:30:10.74:11,0,329	0/0:10,0:10:14.63:0,15,139	0/0:17,0:17:47.32:0,47,653	0/0:25,0:25:69.79:0,70,847	0/0:11,0:11:29.04:0,29,452	0/0:9,0:9:24.02:0,24,333	0/0:22,0:22:60.19:0,60,429	0/1:31,0:31:13.22:13,0,321	0/0:17,0:16:22.95:0,23,179
chr10	85930571	.	TC	T	1452.82	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=5.631;DP=576;FS=77.239;HRun=4;HaplotypeScore=91.8691;InbreedingCoeff=0.7827;MQ=74.27;MQ0=7;MQRankSum=0.022;QD=12.52;ReadPosRankSum=1.278;VQSLOD=-0.5335;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:70.49:0,70,889	1/1:0,5:5:12.03:135,12,0	0/0:52,0:26:26.70:0,27,253	0/0:37,0:15:20.73:0,21,250	0/0:12,0:12:16.83:0,17,194	0/0:13,0:13:34.86:0,35,357	0/0:20,0:21:42.80:0,43,497	0/0:28,0:28:44.22:0,44,301	0/0:12,0:12:28.28:0,28,298	1/1:3,17:20:54.47:551,54,0	1/1:4,15:19:44.16:377,44,0	0/0:15,0:15:21.22:0,21,378	0/0:13,0:13:35.96:0,36,307	0/0:20,0:20:57.10:0,57,608	0/0:26,0:26:68.95:0,69,704	0/0:17,0:17:20.62:0,21,425	1/1:4,18:22:38.81:390,39,0	1/1:22,0:20:36.20:158,36,0	0/0:14,0:14:19.30:0,19,144	0/0:32,0:32:29.70:0,30,286	0/1:10,0:10:4.30:4,0,51	0/0:17,0:17:25.45:0,25,449	0/0:25,0:25:62.36:0,62,591	0/0:11,0:11:29.95:0,30,329	0/0:8,0:8:21.03:0,21,235	0/0:23,0:23:45.70:0,46,274	0/0:32,0:32:5.79:0,6,140	0/1:16,0:16:14.84:15,0,61
chr10	85930625	.	GGCAAGC	G	7426.95	PASS	AC=14;AF=0.269;AN=52;BaseQRankSum=3.920;DP=348;FS=40.802;HRun=0;HaplotypeScore=92.9322;InbreedingCoeff=0.9487;MQ=49.08;MQ0=2;MQRankSum=-12.795;QD=56.69;ReadPosRankSum=1.906;VQSLOD=2.8711;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:31.63:0,32,1033	0/0:5,0:5:15.05:0,15,447	./.	./.	0/0:5,0:5:12:0,12,344	0/0:6,0:6:14.56:0,15,508	0/0:19,0:19:54.19:0,54,1865	1/1:3,18:18:45.15:974,45,0	0/0:8,0:8:24.08:0,24,810	0/0:13,0:13:36.12:0,36,1044	0/0:16,0:16:42.10:0,42,1148	0/0:6,0:6:18.06:0,18,622	0/0:9,0:9:24.08:0,24,859	0/0:12,0:12:33.11:0,33,1146	0/0:11,0:11:30.10:0,30,1075	0/0:11,0:11:30.10:0,30,1066	0/0:31,0:31:74.98:0,75,2056	0/0:24,0:21:57.20:0,57,1679	1/1:0,8:8:24.08:577,24,0	1/1:1,22:23:54.19:1297,54,0	1/1:5,8:13:9.50:216,10,0	0/0:6,0:6:15.05:0,15,512	0/0:3,0:3:6.02:0,6,188	0/0:6,0:6:18.06:0,18,564	0/0:6,0:6:15.05:0,15,469	1/1:1,24:25:72.25:1730,72,0	1/1:2,30:32:83.81:2015,84,0	1/1:1,8:9:27.09:618,27,0
chr10	85931437	.	AATTT	A	1006.27	PASS	AC=20;AF=0.769;AN=26;BaseQRankSum=3.464;DP=86;FS=2.343;HRun=0;HaplotypeScore=23.3016;InbreedingCoeff=0.4906;MQ=91.02;MQ0=1;MQRankSum=-0.940;QD=15.48;ReadPosRankSum=0.725;VQSLOD=2.3471;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,3:9:6.02:97,6,0	./.	./.	./.	./.	0/0:3,0:3:9.03:0,9,217	./.	1/1:10,4:13:12.02:161,12,0	./.	1/1:0,0:1:3:28,3,0	./.	./.	./.	0/0:3,0:3:3.01:0,3,72	0/0:1,0:1:3.01:0,3,72	./.	1/1:0,0:8:9.01:84,9,0	1/1:4,0:6:3:28,3,0	1/1:9,4:12:18.06:279,18,0	./.	1/1:1,4:5:6.02:97,6,0	./.	./.	./.	./.	1/1:1,2:3:6.02:97,6,0	1/1:1,1:2:3.01:48,3,0	1/1:0,4:4:12.04:193,12,0
chr10	85931763	.	AGGCCTCCCATCGG	A	628.38	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.766;DP=436;FS=0.000;HRun=0;HaplotypeScore=176.1229;InbreedingCoeff=0.8139;MQ=80.36;MQ0=0;MQRankSum=-4.040;QD=69.82;ReadPosRankSum=-0.181;VQSLOD=2.7688;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,7151	0/0:1,0:1:3.01:0,3,198	0/0:17,0:17:45.15:0,45,2054	0/0:20,0:19:45.15:0,45,2338	0/0:18,0:18:51.18:0,51,3325	0/0:9,0:9:24.08:0,24,1273	0/0:17,0:17:48.16:0,48,3137	0/0:22,0:22:60.21:0,60,3381	0/0:5,0:5:15.05:0,15,969	0/0:18,0:18:51.18:0,51,3256	0/0:16,0:16:45.15:0,45,2620	0/0:10,0:10:30.10:0,30,1980	0/0:14,0:14:42.13:0,42,2351	0/0:16,0:16:45.15:0,45,2827	0/0:15,0:15:45.15:0,45,2610	0/0:14,0:14:42.14:0,42,2604	0/0:25,0:24:66.23:0,66,4258	1/1:3,6:9:18.06:719,18,0	0/0:25,0:25:72.25:0,72,3963	0/0:8,0:8:21.07:0,21,1356	0/0:21,0:21:60.21:0,60,3722	0/0:7,0:7:21.07:0,21,1306	0/0:7,0:7:18.06:0,18,1159	0/0:30,0:30:90.31:0,90,5698	0/0:9,0:9:24.08:0,24,1558	0/0:17,0:17:48.16:0,48,2906	0/0:17,0:16:51.17:0,51,3136	0/0:7,0:7:21.07:0,21,1383
chr10	85931850	.	G	GAAAAAAAAAAGAACC	26592.19	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=6.648;DP=491;FS=1.301;HRun=0;HaplotypeScore=212.8345;InbreedingCoeff=0.9190;MQ=57.78;MQ0=6;MQRankSum=-15.385;QD=95.31;ReadPosRankSum=-3.993;VQSLOD=4.1162;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,1:38:72.72:4306,73,0	1/1:10,0:10:20.28:767,20,0	0/0:13,0:10:26.62:0,27,656	0/1:11,0:10:16.25:16,0,413	0/0:16,0:16:39.60:0,40,1371	0/0:11,0:13:33.10:0,33,1189	1/1:11,0:14:27.05:1200,27,0	1/1:18,0:17:40.91:1984,41,0	0/0:13,0:13:39.13:0,39,1423	1/1:24,0:21:51.16:1915,51,0	1/1:12,0:11:15.05:625,15,0	0/0:12,0:12:24.08:0,24,988	0/0:24,0:25:54.18:0,54,2026	0/0:20,0:22:54.19:0,54,2008	0/0:13,0:13:33.11:0,33,1249	0/0:17,0:20:54.17:0,54,1842	1/1:19,0:21:36.12:1908,36,0	1/1:8,0:11:14.64:979,15,0	1/1:18,3:22:48.16:2433,48,0	1/1:7,4:12:21.07:1236,21,0	1/1:9,0:11:12.04:660,12,0	0/0:15,0:15:32.42:0,32,1128	0/0:12,0:12:27.09:0,27,1105	0/0:21,0:24:60.19:0,60,2198	0/0:12,0:12:30.10:0,30,1137	1/1:18,5:20:39.13:2234,39,0	1/1:27,5:33:78.41:4929,78,0	1/1:9,1:10:24.08:1401,24,0
chr10	85933004	.	C	CTG	4800.29	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-11.840;DP=801;FS=11.510;HRun=0;HaplotypeScore=93.7497;InbreedingCoeff=0.9986;MQ=86.94;MQ0=0;MQRankSum=-1.325;QD=50.53;ReadPosRankSum=0.464;VQSLOD=4.9388;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,166,2326	1/1:0,8:8:24.08:440,24,0	0/0:25,0:25:60.06:0,60,804	0/0:32,0:32:83.65:0,84,1085	0/0:23,0:23:69.23:0,69,988	0/0:18,0:18:54.18:0,54,774	0/0:25,0:25:75.25:0,75,1072	0/0:21,0:21:63.20:0,63,871	0/0:34,0:34:96.29:0,96,1337	1/1:0,26:26:78.26:1392,78,0	1/1:2,11:13:30.10:549,30,0	0/0:34,0:34:99:0,99,1419	0/0:32,0:32:93.30:0,93,1313	0/0:40,0:40:99:0,120,1701	0/0:45,0:45:99:0,132,1872	0/0:38,0:38:99:0,114,1631	1/1:1,22:23:60.21:1100,60,0	1/1:1,24:25:72.25:1320,72,0	0/0:33,0:33:93.27:0,93,1250	0/0:31,0:31:87.26:0,87,1209	0/0:43,0:43:99:0,117,1653	0/0:30,0:30:87.29:0,87,1245	0/0:22,0:22:63.21:0,63,902	0/0:27,0:27:75.23:0,75,1056	0/0:24,0:24:72.22:0,72,1012	0/0:26,1:27:26.25:0,26,1045	0/0:35,0:35:99:0,102,1442	0/0:8,0:8:24.08:0,24,343
chr10	85934520	.	CT	C	3034.41	PASS	AB=0.947;AC=16;AF=0.286;AN=56;BaseQRankSum=10.652;DP=586;FS=4.022;HRun=10;HaplotypeScore=64.3340;InbreedingCoeff=0.8299;MQ=67.81;MQ0=0;MQRankSum=-0.356;QD=15.80;ReadPosRankSum=1.081;VQSLOD=4.1158;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,40:49:99:1119,129,0	1/1:1,5:6:15:130,15,0	0/0:24,0:15:17.65:0,18,135	0/1:21,0:14:46.35:46,0,51	0/0:29,1:30:37.08:0,37,613	0/0:25,0:25:69.17:0,69,748	1/1:1,18:19:41.99:365,42,0	0/0:31,1:32:34.10:0,34,604	0/0:14,0:15:38.93:0,39,408	1/1:7,13:20:32.75:286,33,0	1/1:5,16:21:44.01:370,44,0	0/0:9,0:13:32.74:0,33,319	0/0:20,1:21:13.03:0,13,356	0/0:17,0:17:48.09:0,48,516	0/0:25,0:25:60.16:0,60,664	0/0:12,0:12:27.07:0,27,299	1/1:2,15:17:44.99:390,45,0	1/1:3,19:22:59.99:521,60,0	0/0:29,0:28:57.15:0,57,630	0/1:15,2:17:7:7,0,379	0/0:12,0:12:27.07:0,27,299	0/0:21,0:22:60.04:0,60,625	0/0:16,0:17:44.95:0,45,476	0/0:19,0:19:45.08:0,45,484	0/0:19,0:19:45.12:0,45,498	0/0:23,0:24:44.95:0,45,472	0/0:24,0:24:51.13:0,51,556	0/0:13,0:14:35.89:0,36,359
chr10	85934606	.	C	CG	6852.50	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-11.619;DP=605;FS=5.358;HRun=0;HaplotypeScore=56.8644;InbreedingCoeff=0.9970;MQ=83.49;MQ0=0;MQRankSum=-2.814;QD=42.56;ReadPosRankSum=2.912;VQSLOD=5.5210;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,44:47:99:1820,114,0	1/1:0,5:5:15.05:239,15,0	0/0:19,0:19:40.38:0,40,594	0/0:20,0:20:57.14:0,57,721	0/0:31,0:31:93.30:0,93,1283	0/0:14,0:14:39.08:0,39,491	1/1:1,18:19:54.18:862,54,0	0/0:27,0:27:81.23:0,81,1059	0/0:25,0:25:75.24:0,75,1031	1/1:0,24:24:63.21:990,63,0	1/1:1,11:12:36.12:573,36,0	0/0:17,0:17:51.16:0,51,695	0/0:20,0:20:60.20:0,60,838	0/0:20,0:20:60.17:0,60,803	0/0:14,0:14:42.12:0,42,568	0/0:23,0:23:69.22:0,69,948	1/1:2,31:33:96.33:1519,96,0	1/1:2,19:21:54.18:849,54,0	0/0:15,0:15:39.11:0,39,497	0/0:23,0:23:69.19:0,69,943	0/0:18,0:18:54.17:0,54,738	0/0:18,0:18:51.17:0,51,711	0/0:17,0:17:51.15:0,51,695	0/0:27,0:27:81.27:0,81,1133	0/0:21,0:21:60.20:0,60,839	0/0:32,0:32:96.30:0,96,1313	0/0:27,0:27:81.24:0,81,1097	0/0:16,0:16:48.16:0,48,666
chr10	85936116	.	C	CTCAT	23731.24	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-16.558;DP=738;FS=5.540;HRun=0;HaplotypeScore=107.2500;InbreedingCoeff=0.9957;MQ=78.01;MQ0=0;MQRankSum=-7.490;QD=67.80;ReadPosRankSum=0.387;VQSLOD=7.1352;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:25:54.10:1335,54,0	1/1:1,4:5:12:263,12,0	0/0:24,0:24:63.03:0,63,1074	0/0:12,0:12:35.86:0,36,588	0/0:29,0:29:81.28:0,81,1527	0/0:23,0:23:69.17:0,69,1216	1/1:3,13:16:42.06:1011,42,0	1/1:6,32:42:99:3062,123,0	0/0:27,0:27:69.24:0,69,1301	1/1:7,23:31:90.28:2245,90,0	1/1:4,18:22:54.19:1449,54,0	0/0:23,0:23:69.20:0,69,1244	0/0:26,0:26:75.26:0,75,1410	0/0:27,0:27:78.27:0,78,1481	0/0:37,0:37:99:0,105,1957	0/0:36,0:36:99:0,102,1921	1/1:2,20:24:56.94:1517,57,0	1/1:1,12:13:36.12:972,36,0	1/1:4,9:15:42.14:1079,42,0	1/1:6,32:37:99:2545,99,0	1/1:5,29:34:87.17:2164,87,0	0/0:32,0:32:90.27:0,90,1631	0/0:41,0:41:99:0,108,2008	0/0:16,0:16:45.13:0,45,820	0/0:35,0:35:99:0,105,1867	1/1:3,22:26:72.23:1885,72,0	1/1:5,32:38:99:2586,99,0	1/1:0,21:21:60.21:1619,60,0
chr10	85936588	.	TGGCTCTTACACACGGACTCCAAAATGA	T	6287.35	PASS	AB=0.944;AC=9;AF=0.161;AN=56;BaseQRankSum=9.805;DP=760;FS=5.343;HRun=0;HaplotypeScore=500.0372;InbreedingCoeff=0.8540;MQ=84.08;MQ0=0;MQRankSum=-8.577;QD=79.59;ReadPosRankSum=2.522;VQSLOD=2.5078;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,154,15718	1/1:0,10:10:24.08:1616,24,0	0/0:27,0:27:66.25:0,66,3865	0/0:19,0:19:48.09:0,48,2794	0/0:30,0:30:90.31:0,90,9837	0/0:28,0:28:84.29:0,84,9088	0/0:24,0:24:66.23:0,66,7529	0/0:35,0:35:99:0,102,7960	0/0:20,0:20:60.19:0,60,6268	1/1:1,15:16:42.14:2613,42,0	1/1:0,10:10:12.04:787,12,0	0/0:23,0:23:69.24:0,69,7351	0/0:37,0:37:99:0,108,11111	0/0:45,0:45:99:0,129,14305	0/0:34,0:34:99:0,99,10753	0/0:23,0:23:66.23:0,66,7994	1/1:0,9:9:15.05:1094,15,0	0/0:19,0:19:57.20:0,57,6065	0/0:22,0:22:63.22:0,63,4750	0/0:30,0:30:90.31:0,90,9477	0/0:54,0:54:99:0,160,16470	0/0:27,0:27:81.28:0,81,9709	0/0:14,0:14:42.14:0,42,4801	0/0:33,0:33:96.27:0,96,9678	0/0:26,0:26:78.27:0,78,8275	0/1:32,2:34:99:177,0,11297	0/0:48,0:48:99:0,141,15025	0/0:12,0:12:36.12:0,36,2999
chr10	85937754	.	TG	T	1093.54	PASS	AB=0.600;AC=3;AF=0.054;AN=56;BaseQRankSum=8.735;DP=460;FS=0.000;HRun=4;HaplotypeScore=51.6972;InbreedingCoeff=0.6142;MQ=65.81;MQ0=14;MQRankSum=-5.011;QD=18.85;ReadPosRankSum=0.386;VQSLOD=2.7114;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,28:32:33.29:958,33,0	0/0:11,0:11:33.11:0,33,461	0/0:11,0:11:33.08:0,33,426	0/0:12,0:11:24.06:0,24,284	0/0:15,0:14:42.14:0,42,585	0/0:21,0:21:63.18:0,63,846	0/1:7,14:20:99:241,0,118	0/0:14,0:13:36.12:0,36,504	0/0:10,0:9:24.08:0,24,333	0/0:18,0:17:51.14:0,51,668	0/0:25,0:24:63.14:0,63,851	0/0:13,0:10:27.09:0,27,378	0/0:11,0:11:30.08:0,30,401	0/0:19,0:17:48.08:0,48,626	0/0:24,0:22:57.17:0,57,777	0/0:13,0:13:39.13:0,39,545	0/0:25,0:24:60.16:0,60,816	0/0:12,0:11:23.96:0,24,293	0/0:12,0:12:36.11:0,36,485	0/0:13,0:11:30.10:0,30,418	0/0:15,0:15:42.12:0,42,566	0/0:4,0:4:9.03:0,9,126	0/0:8,0:8:21.07:0,21,293	0/0:26,0:23:63.20:0,63,865	0/0:15,0:15:42.13:0,42,570	0/0:16,0:15:45.15:0,45,630	0/0:29,0:28:75.25:0,75,1046	0/0:10,0:9:21.07:0,21,294
chr10	85937868	.	A	AAC	73.83	PASS	AB=0.864;AC=2;AF=0.037;AN=54;BaseQRankSum=4.425;DP=414;FS=3.044;HRun=0;HaplotypeScore=60.8574;InbreedingCoeff=-0.0467;MQ=52.01;MQ0=41;MQRankSum=-2.365;QD=3.36;ReadPosRankSum=1.276;VQSLOD=1.6232;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,6:16:99:148,0,382	0/0:8,0:7:15.05:0,15,230	0/0:41,0:7:8.94:0,9,75	0/0:50,0:8:14.24:0,14,156	0/0:19,0:17:44.98:0,45,655	0/0:8,0:8:19.77:0,20,235	0/0:13,0:12:35.86:0,36,520	0/0:30,0:26:69.22:0,69,1069	0/0:9,0:7:14.38:0,14,255	0/0:15,0:14:36.05:0,36,522	0/0:19,0:17:39.13:0,39,614	0/0:5,0:5:11.91:0,12,162	0/0:11,0:11:25.42:0,25,308	0/0:6,0:5:9.01:0,9,147	0/0:8,0:8:21.12:0,21,298	0/1:6,0:6:1.28:1,0,113	0/0:18,0:14:33.11:0,33,536	0/0:17,0:12:24.07:0,24,369	0/0:15,0:14:39.04:0,39,583	0/0:10,0:10:30.10:0,30,485	./.	0/0:3,0:3:6.02:0,6,87	0/0:9,0:8:18.02:0,18,219	0/0:4,0:3:6.02:0,6,98	0/0:13,0:13:27.96:0,28,419	0/0:11,0:9:24.08:0,24,374	0/0:24,0:24:57.01:0,57,906	0/0:19,0:15:41.81:0,42,635
chr10	85937873	.	ATAAT	A	133.81	PASS	AB=0.913;AC=3;AF=0.054;AN=56;BaseQRankSum=5.555;DP=414;FS=0.987;HRun=0;HaplotypeScore=68.4128;InbreedingCoeff=-0.0758;MQ=56.30;MQ0=24;MQRankSum=-5.383;QD=2.00;ReadPosRankSum=-0.617;VQSLOD=1.4874;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,6:17:99:203,0,742	0/0:8,0:7:18.06:0,18,465	0/1:42,0:8:6.24:6,0,109	0/0:51,0:9:11.13:0,11,129	0/0:15,0:15:19.17:0,19,950	0/0:6,0:6:15.52:0,16,420	0/0:12,0:11:30.10:0,30,747	0/0:28,0:28:78.25:0,78,2015	0/0:13,0:11:14.42:0,14,685	0/0:16,0:15:44.98:0,45,1125	0/0:18,0:18:45:0,45,1101	0/0:7,0:7:18.06:0,18,462	0/0:11,0:11:19.82:0,20,620	0/0:5,0:5:15.05:0,15,414	0/0:9,0:9:2.80:0,3,528	0/0:5,0:5:11.43:0,11,296	0/0:16,0:14:33.11:0,33,906	0/0:14,0:12:27.09:0,27,707	0/0:20,0:19:57.15:0,57,1366	0/0:12,0:12:36.12:0,36,996	0/0:6,0:1:3.01:0,3,71	0/0:5,0:5:12.04:0,12,262	0/1:8,0:8:15.94:16,0,392	0/0:6,0:4:8.92:0,9,184	0/0:13,0:13:17.30:0,17,903	0/0:8,0:7:21.05:0,21,527	0/0:22,0:22:63.69:0,64,1691	0/0:21,0:18:46.13:0,46,1264
chr10	85937892	.	AT	A	1770.61	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.564;DP=391;FS=18.310;HRun=4;HaplotypeScore=51.2396;InbreedingCoeff=0.9170;MQ=65.72;MQ0=3;MQRankSum=-5.638;QD=30.53;ReadPosRankSum=-0.235;VQSLOD=1.6671;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:36.10:0,36,485	1/1:0,7:7:21.06:252,21,0	0/0:13,0:8:1.25:0,1,173	0/0:16,0:6:9.03:0,9,126	0/0:19,0:19:57.18:0,57,776	0/0:15,0:15:45.11:0,45,608	0/0:14,0:14:42.14:0,42,588	0/0:24,0:24:66.22:0,66,923	0/0:12,0:12:36.12:0,36,504	1/1:1,18:19:57.17:682,57,0	1/1:0,19:19:54.17:647,54,0	0/0:7,0:7:21.07:0,21,294	0/0:11,0:11:30.10:0,30,420	0/0:12,0:12:36.12:0,36,502	0/0:13,0:13:39.13:0,39,546	0/0:11,0:11:31.35:0,31,423	1/1:1,12:12:30.08:348,30,0	0/0:13,0:13:30.10:0,30,420	0/0:20,0:20:60.19:0,60,823	0/0:16,0:16:48.16:0,48,672	0/0:8,0:8:24.08:0,24,336	0/0:10,0:10:30.10:0,30,419	0/0:7,0:7:21.07:0,21,294	0/0:5,0:5:15.05:0,15,210	0/0:17,0:17:51.17:0,51,714	0/0:10,0:10:30.10:0,30,420	0/0:26,0:25:75.23:0,75,1031	0/0:19,0:19:54.16:0,54,738
chr10	85937917	.	GTA	G	3575.45	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.349;DP=432;FS=16.867;HRun=0;HaplotypeScore=59.7348;InbreedingCoeff=0.9864;MQ=66.93;MQ0=0;MQRankSum=-4.561;QD=30.82;ReadPosRankSum=-2.978;VQSLOD=3.1750;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:63.20:810,63,0	1/1:1,6:7:18.03:231,18,0	0/0:12,0:12:23.73:0,24,324	0/0:6,0:7:12.04:0,12,202	0/0:22,0:22:63.22:0,63,1063	0/0:20,0:20:57.19:0,57,957	1/1:1,17:18:48.16:617,48,0	0/0:15,0:15:30.10:0,30,506	0/0:16,0:16:42.14:0,42,707	1/1:4,19:23:63.20:798,63,0	1/1:3,16:19:39.13:502,39,0	0/0:10,0:10:30.09:0,30,480	0/0:11,0:11:33.11:0,33,556	0/0:18,0:18:51.17:0,51,855	0/0:19,0:19:54.18:0,54,908	0/0:11,0:11:33.11:0,33,556	1/1:2,7:8:15.05:193,15,0	1/1:1,11:12:33.11:424,33,0	0/0:13,0:13:39.11:0,39,630	0/0:19,0:19:57.20:0,57,962	0/0:16,0:16:45.15:0,45,759	0/0:13,0:13:39.13:0,39,658	0/0:11,0:11:33.08:0,33,500	0/0:5,0:5:15.05:0,15,253	0/0:17,0:17:48.16:0,48,810	0/0:19,0:19:54.18:0,54,888	0/0:28,0:27:78.27:0,78,1312	0/0:14,0:14:42.14:0,42,708
chr10	85938940	.	TA	T	1492.54	PASS	AB=0.860;AC=26;AF=0.464;AN=56;BaseQRankSum=3.619;DP=437;FS=9.060;HRun=16;HaplotypeScore=67.2228;InbreedingCoeff=0.3853;MQ=58.99;MQ0=8;MQRankSum=-3.780;QD=5.72;ReadPosRankSum=2.704;VQSLOD=2.2062;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,2:24:8.51:0,9,258	1/1:0,1:3:7.02:30,7,0	0/0:17,1:6:8.65:0,9,49	0/0:20,0:5:8.20:0,8,39	0/1:21,1:24:1.49:1,0,277	0/1:12,1:13:1.46:1,0,157	0/1:9,1:10:15.91:16,0,83	1/1:17,7:22:14.87:192,15,0	0/0:14,1:14:5.94:0,6,153	1/1:5,10:14:35.26:214,35,0	0/1:12,4:18:30.77:104,0,31	0/0:10,0:11:17.81:0,18,137	0/0:10,1:12:11.80:0,12,198	0/0:14,0:14:28.48:0,28,222	0/0:11,1:13:8.80:0,9,170	0/1:8,1:9:23.79:24,0,36	1/1:15,10:24:18.54:219,19,0	0/0:22,1:22:5.69:0,6,133	1/1:8,6:13:7.20:153,7,0	1/1:10,6:21:19.27:187,19,0	1/1:3,4:7:11.76:72,12,0	0/1:5,1:6:12.42:12,0,19	0/0:9,0:10:20.77:0,21,158	0/1:6,1:8:9.32:9,0,61	0/0:13,0:13:19.39:0,19,171	1/1:15,12:26:22.87:217,23,0	1/1:8,8:19:9.18:140,9,0	0/1:6,7:15:56.61:91,0,57
chr10	85938967	.	TA	T	2486.58	PASS	AB=0.729;AC=27;AF=0.482;AN=56;BaseQRankSum=3.527;DP=524;FS=5.264;HRun=14;HaplotypeScore=75.8944;InbreedingCoeff=0.7488;MQ=69.39;MQ0=6;MQRankSum=-3.192;QD=8.88;ReadPosRankSum=-0.348;VQSLOD=2.8596;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,20:28:13.76:238,14,0	1/1:1,7:8:20.83:144,21,0	0/0:41,0:16:4.91:0,5,75	0/0:32,1:12:8.51:0,9,50	0/0:25,0:25:46.16:0,46,447	0/0:12,1:13:6.43:0,6,194	1/1:5,5:10:11.80:79,12,0	1/1:17,13:29:38.27:253,38,0	0/0:15,0:17:41.87:0,42,372	1/1:9,12:21:20.75:271,21,0	1/1:12,9:21:22.65:205,23,0	0/0:14,0:14:12.50:0,13,248	0/0:15,1:16:7.65:0,8,213	0/0:16,0:17:42.04:0,42,385	0/0:15,0:16:29.98:0,30,263	0/0:12,0:13:32.85:0,33,285	0/1:13,12:26:13.73:158,0,14	1/1:4,12:16:20.73:144,21,0	1/1:7,10:18:37.51:238,38,0	1/1:9,10:22:17.59:230,18,0	1/1:5,5:10:17.76:121,18,0	0/1:4,1:5:8.62:9,0,59	0/0:12,0:13:26.75:0,27,219	0/0:8,0:9:13.07:0,13,147	0/0:12,2:14:7.59:0,8,187	1/1:14,14:27:17.77:263,18,0	1/1:5,14:19:32.32:236,32,0	0/1:9,5:16:0.74:110,0,1
chr10	85941507	.	TA	T	6327.17	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=8.570;DP=568;FS=0.333;HRun=10;HaplotypeScore=58.4761;InbreedingCoeff=0.9727;MQ=64.81;MQ0=0;MQRankSum=-1.892;QD=20.61;ReadPosRankSum=1.256;VQSLOD=5.7014;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:31:71.98:625,72,0	1/1:1,5:6:11.95:97,12,0	0/0:13,0:12:23.16:0,23,152	0/0:11,0:9:22.87:0,23,232	0/0:21,0:21:51.10:0,51,538	0/0:13,0:13:36.07:0,36,380	1/1:4,24:28:56.98:495,57,0	1/1:3,20:23:59.95:518,60,0	0/0:24,0:25:59.90:0,60,612	1/1:3,20:23:56.99:495,57,0	1/1:2,14:16:35.93:305,36,0	0/0:16,1:17:19.05:0,19,430	0/0:26,0:26:66.15:0,66,713	0/0:15,1:16:13.04:0,13,363	0/0:20,0:20:56.16:0,56,587	0/0:22,1:23:37.07:0,37,612	1/1:6,14:20:38.97:339,39,0	1/1:1,25:26:65.99:573,66,0	1/1:1,26:27:77.97:673,78,0	1/1:3,17:20:19.29:373,19,0	1/1:4,17:21:44.99:391,45,0	0/0:20,2:22:5:0,5,474	0/0:22,0:22:54.14:0,54,595	0/0:16,0:16:42.09:0,42,455	0/0:16,0:16:42.10:0,42,456	1/1:3,16:19:44.95:384,45,0	1/1:4,25:29:71.94:618,72,0	1/1:1,17:18:50.99:443,51,0
chr10	85941977	.	T	TGTGCGC	1910.20	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=5.689;DP=657;FS=10.952;HRun=0;HaplotypeScore=159.2969;InbreedingCoeff=0.9235;MQ=60.25;MQ0=12;MQRankSum=-6.749;QD=13.27;ReadPosRankSum=-1.756;VQSLOD=2.2752;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:37:15.05:478,15,0	1/1:3,0:7:5.75:107,6,0	0/0:14,0:8:17:0,17,174	0/0:26,0:9:8.80:0,9,63	0/0:26,0:26:75.20:0,75,1507	0/0:33,0:33:93.24:0,93,1836	1/1:0,20:22:12.04:398,12,0	0/0:28,0:28:75.11:0,75,1142	0/0:26,0:25:69.19:0,69,1379	1/1:8,0:21:43.68:525,44,0	1/1:4,0:12:4.93:49,5,0	0/0:27,0:27:69.07:0,69,1212	0/0:29,0:29:78.21:0,78,1611	0/0:23,0:23:59.94:0,60,1360	0/0:18,0:18:54.11:0,54,1143	0/0:19,0:18:51.11:0,51,995	1/1:11,0:21:17.95:273,18,0	1/1:7,0:21:12:264,12,0	0/0:24,0:23:59.06:0,59,875	0/0:33,0:33:93.27:0,93,1493	0/0:24,0:24:48.16:0,48,823	0/0:31,0:31:87.24:0,87,1630	0/0:10,0:10:27.08:0,27,508	0/0:25,0:25:66.16:0,66,1276	0/0:26,0:26:72.21:0,72,1396	0/0:36,0:36:99:0,99,1563	0/0:29,0:29:72.25:0,72,1231	0/0:6,0:6:15.05:0,15,263
chr10	85943185	.	T	TTTTG	12340.21	PASS	AC=26;AF=0.481;AN=54;BaseQRankSum=-2.947;DP=376;FS=2.317;HRun=0;HaplotypeScore=59.1048;InbreedingCoeff=0.9635;MQ=72.43;MQ0=2;MQRankSum=-5.085;QD=55.59;ReadPosRankSum=1.201;VQSLOD=5.9641;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:23:45.15:1214,45,0	1/1:3,0:3:9.01:119,9,0	0/0:16,0:10:18.82:0,19,298	0/0:15,0:9:8.96:0,9,68	0/0:18,0:18:54.18:0,54,1009	0/0:18,0:18:54.18:0,54,1002	1/1:1,9:10:24.08:646,24,0	1/1:3,10:14:36.12:819,36,0	0/0:5,0:5:15.04:0,15,240	1/1:6,23:29:78.17:1587,78,0	1/1:0,10:10:24.08:645,24,0	0/0:5,0:5:15.05:0,15,277	0/0:11,0:11:33.08:0,33,552	0/0:9,0:9:18.04:0,18,307	0/0:15,0:15:45.13:0,45,812	0/0:6,0:6:18.06:0,18,333	1/1:4,21:25:42.14:1131,42,0	1/1:1,17:18:39.13:1051,39,0	1/1:2,6:8:21.02:390,21,0	1/1:2,16:18:48.08:1229,48,0	1/1:1,12:13:24.08:648,24,0	0/0:4,0:4:9.03:0,9,171	0/0:10,0:10:30.08:0,30,505	0/0:5,0:4:15.03:0,15,244	0/0:14,0:14:39.13:0,39,741	1/1:2,27:29:78.22:1893,78,0	1/1:0,18:18:36.12:968,36,0	./.
chr10	85943386	.	G	GT	1004.86	PASS	AB=0.829;AC=11;AF=0.196;AN=56;BaseQRankSum=5.516;DP=398;FS=2.851;HRun=4;HaplotypeScore=68.3114;InbreedingCoeff=0.4336;MQ=57.90;MQ0=1;MQRankSum=-4.394;QD=11.04;ReadPosRankSum=-2.092;VQSLOD=0.6585;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:32.49:0,32,375	1/1:2,3:5:7.22:119,7,0	0/0:19,0:12:26.31:0,26,281	0/1:15,0:11:22.34:22,0,119	0/0:12,0:12:33.09:0,33,373	0/0:15,0:14:42.12:0,42,470	0/0:13,0:12:24.94:0,25,311	0/0:30,0:30:59.92:0,60,624	0/0:7,0:7:14.99:0,15,154	1/1:0,4:4:9.03:119,9,0	1/1:3,8:10:20.54:322,21,0	0/0:13,0:13:33.09:0,33,374	0/0:13,0:13:32.87:0,33,355	0/0:18,0:18:36.10:0,36,408	0/0:21,0:19:42.11:0,42,468	0/0:13,0:13:39.09:0,39,429	0/1:8,14:19:6.37:285,0,6	0/1:6,8:14:1.30:275,0,1	0/0:35,1:35:42.88:0,43,875	0/1:11,0:11:9.49:9,0,149	0/0:13,0:12:22.56:0,23,267	0/0:2,0:2:6.02:0,6,68	0/0:6,0:6:12.02:0,12,126	0/0:26,0:26:69.15:0,69,768	0/0:8,0:8:24.06:0,24,264	0/0:18,0:18:1.80:0,2,322	0/1:8,1:9:4.68:5,0,78	0/0:2,0:2:3.01:0,3,34
chr10	85943397	.	G	GTTTTTTGTTT	5318.14	PASS	AB=0.989;AC=24;AF=0.444;AN=54;BaseQRankSum=2.813;DP=435;FS=20.496;HRun=0;HaplotypeScore=134.9642;InbreedingCoeff=0.4709;MQ=60.88;MQ0=1;MQRankSum=-6.511;QD=21.27;ReadPosRankSum=-4.003;VQSLOD=1.6118;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:38.88:64,0,39	1/1:5,0:5:11.29:164,11,0	0/1:26,0:16:42.35:42,0,152	0/0:17,0:11:15.72:0,16,216	0/0:11,0:11:27.06:0,27,598	0/0:19,0:18:39.94:0,40,831	0/1:14,0:13:50.75:51,0,92	1/1:29,0:29:42.41:761,42,0	0/0:11,0:11:26.54:0,27,543	1/1:7,0:7:10.70:77,11,0	0/1:11,0:10:24.85:32,0,25	0/0:12,0:12:29.96:0,30,343	0/0:12,0:12:20.74:0,21,307	0/0:19,0:19:42.10:0,42,778	0/0:20,0:18:42.06:0,42,953	0/0:18,0:18:51.07:0,51,1079	0/1:21,0:18:68.96:69,0,75	0/1:14,0:14:29.95:320,0,30	1/1:39,0:39:68.51:1024,69,0	1/1:6,7:16:17.95:431,18,0	1/1:10,0:10:2.99:76,3,0	./.	0/0:8,0:8:18.01:0,18,227	0/0:30,0:30:69.15:0,69,1501	0/0:6,0:6:15.04:0,15,322	1/1:2,17:22:53.23:1916,53,0	1/1:2,5:11:5.54:247,6,0	1/1:2,0:2:5.94:44,6,0
chr10	85943636	.	TGGGTC	T	427.91	PASS	AB=0.949;AC=14;AF=0.259;AN=54;BaseQRankSum=-0.152;DP=348;FS=49.343;HRun=0;HaplotypeScore=100.0322;InbreedingCoeff=-0.3788;MQ=43.99;MQ0=13;MQRankSum=-0.101;QD=2.63;ReadPosRankSum=0.701;VQSLOD=-0.1710;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:24.93:0,25,328	0/1:5,0:5:7.17:7,0,94	0/0:12,0:3:3.84:0,4,42	0/1:10,0:2:10.06:10,0,31	0/1:14,0:13:49.55:50,0,227	0/0:20,0:20:33.29:0,33,680	0/1:7,0:7:36.77:37,0,92	0/0:23,0:17:20.72:0,21,231	0/1:17,0:17:9.32:9,0,396	0/1:9,0:9:99:188,0,106	0/1:6,6:12:82.37:82,0,208	0/0:5,0:4:9.03:0,9,135	0/1:10,0:9:29.74:30,0,241	0/0:6,0:7:16.56:0,17,200	0/0:19,0:17:3.17:0,3,437	0/1:7,0:8:21.30:21,0,170	0/1:10,0:11:86.39:86,0,288	0/0:15,0:14:17.60:0,18,241	0/0:16,0:14:7.15:0,7,98	0/1:14,0:14:9.17:9,0,40	0/0:8,0:8:5.60:0,6,69	./.	0/1:6,0:6:11.25:11,0,74	0/1:18,0:19:17.68:18,0,319	0/0:19,0:20:13.19:0,13,293	0/0:18,0:17:14.75:0,15,157	0/1:18,0:17:14.09:14,0,59	0/0:2,0:2:6.02:0,6,76
chr10	85945112	.	GA	G	1976.32	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=10.689;DP=453;FS=8.311;HRun=10;HaplotypeScore=44.3391;InbreedingCoeff=0.8934;MQ=65.81;MQ0=0;MQRankSum=-1.142;QD=17.80;ReadPosRankSum=-0.174;VQSLOD=3.4694;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,21:26:53.98:469,54,0	1/1:1,6:7:15:130,15,0	0/1:5,0:5:11.03:11,0,98	0/0:6,0:6:9.02:0,9,97	0/0:27,0:27:81.18:0,81,871	0/0:13,0:13:39.11:0,39,431	1/1:1,8:9:23.99:208,24,0	0/0:33,2:35:61.18:0,61,896	0/0:14,0:14:30.05:0,30,315	1/1:4,14:18:41.97:362,42,0	1/1:2,11:13:32.99:286,33,0	0/0:12,0:12:24.06:0,24,265	0/0:11,0:11:33.09:0,33,365	0/0:19,0:19:54.15:0,54,597	0/0:20,0:20:54.14:0,54,595	0/0:20,0:20:51.13:0,51,557	1/1:2,12:14:32.99:286,33,0	1/1:0,18:19:50.03:423,50,0	0/0:13,0:14:26.91:0,27,280	0/0:26,0:26:69.19:0,69,763	0/0:17,0:17:48.10:0,48,514	0/0:8,0:8:12.03:0,12,133	0/0:7,0:7:18.03:0,18,190	0/0:15,0:15:45.12:0,45,498	0/0:19,0:19:50.34:0,50,532	0/0:22,2:24:17.06:0,17,638	0/0:23,0:23:54.13:0,54,582	0/0:12,0:12:33.09:0,33,365
chr10	85945349	.	G	GA	1606.72	PASS	AB=0.921;AC=9;AF=0.161;AN=56;BaseQRankSum=-6.676;DP=596;FS=4.462;HRun=10;HaplotypeScore=62.4953;InbreedingCoeff=0.8543;MQ=63.65;MQ0=1;MQRankSum=-0.007;QD=14.47;ReadPosRankSum=1.050;VQSLOD=3.9315;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:53:78.26:0,78,242	1/1:1,4:5:12.03:128,12,0	0/0:23,0:10:10.66:0,11,130	0/0:15,0:10:15.58:0,16,129	0/1:32,3:35:0.08:0,0,618	0/0:19,1:20:21.95:0,22,387	0/0:1,0:16:24.44:0,24,71	0/0:27,1:28:59.89:0,60,490	0/0:19,0:19:50.93:0,51,419	1/1:6,13:20:44.94:450,45,0	1/1:2,18:20:51.13:542,51,0	0/0:19,0:19:47.93:0,48,394	0/0:20,0:20:47.93:0,48,394	0/0:20,0:20:50.91:0,51,418	0/0:26,0:26:62.90:0,63,517	0/0:24,0:24:65.92:0,66,542	1/1:5,26:31:61.40:643,61,0	0/0:14,1:14:3.81:0,4,228	0/0:20,0:20:53.91:0,54,440	0/0:24,0:24:65.90:0,66,539	0/0:6,0:6:14.97:0,15,123	0/0:18,0:18:41.92:0,42,342	0/0:14,0:13:32.95:0,33,271	0/0:16,0:16:44.95:0,45,369	0/0:18,0:18:44.94:0,45,369	0/0:22,1:23:22.17:0,22,378	0/0:31,1:32:45.90:0,46,584	0/0:16,0:16:10.18:0,10,288
chr10	85948004	.	T	TA	2297.23	PASS	AB=0.950;AC=14;AF=0.250;AN=56;BaseQRankSum=-7.124;DP=434;FS=5.004;HRun=10;HaplotypeScore=46.4246;InbreedingCoeff=0.7236;MQ=68.81;MQ0=5;MQRankSum=0.994;QD=17.67;ReadPosRankSum=2.962;VQSLOD=4.2162;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:24:54.14:576,54,0	1/1:0,4:4:12.03:128,12,0	0/0:15,0:6:5.54:0,6,26	0/1:15,0:12:13.81:14,0,85	0/0:27,0:27:68.90:0,69,565	0/0:19,0:19:53.94:0,54,443	1/1:1,9:11:5.40:244,5,0	0/0:34,0:33:68.62:0,69,563	0/0:14,0:14:20.94:0,21,172	1/1:5,15:20:20.66:423,21,0	1/1:1,16:17:20.47:423,20,0	0/0:8,0:9:17:0,17,129	0/0:13,0:13:38.93:0,39,317	0/0:12,0:12:29.94:0,30,243	0/0:10,0:10:26.87:0,27,213	0/0:13,0:13:35.94:0,36,293	1/1:6,23:29:41.52:646,42,0	0/0:16,0:16:29.98:0,30,287	0/0:28,0:25:62.75:0,63,517	0/0:9,0:9:20.96:0,21,171	0/0:10,0:11:29.01:0,29,228	0/0:3,0:3:5.98:0,6,48	0/0:5,0:5:5.99:0,6,49	0/0:6,0:6:14.98:0,15,123	0/0:18,0:18:47.94:0,48,394	0/0:22,0:22:62.93:0,63,517	0/0:20,0:20:47.85:0,48,386	0/1:8,1:9:26.62:27,0,81
chr10	85948495	.	CGAAAAAAA	C	1395.54	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.254;DP=573;FS=3.250;HRun=0;HaplotypeScore=132.7823;InbreedingCoeff=0.9026;MQ=55.95;MQ0=9;MQRankSum=-7.341;QD=29.69;ReadPosRankSum=0.930;VQSLOD=3.3671;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,25:35:35.99:887,36,0	0/0:4,0:4:12.04:0,12,502	0/0:9,0:4:9.03:0,9,366	0/0:8,0:4:5.93:0,6,143	0/0:31,0:31:66.20:0,66,2365	0/0:23,0:23:54.19:0,54,2191	1/1:3,8:10:24.08:630,24,0	0/0:21,0:19:54.19:0,54,1998	0/0:21,0:21:51.17:0,51,2001	0/0:22,0:22:51.17:0,51,2063	0/0:15,0:15:39.13:0,39,1589	0/0:10,0:10:24.08:0,24,1008	0/0:17,0:17:39.13:0,39,1576	0/0:22,0:22:66.23:0,66,2728	0/0:26,0:26:72.24:0,72,2808	0/0:20,0:19:48.16:0,48,1817	0/0:53,0:52:99:0,135,5189	0/0:34,0:32:87.21:0,87,3258	0/0:20,0:19:42.14:0,42,1694	0/0:16,0:16:45.15:0,45,1794	0/0:15,0:15:30.10:0,30,1217	0/0:11,0:11:21.07:0,21,882	0/0:13,0:13:27.56:0,28,1135	0/0:37,0:36:99:0,105,3714	0/0:14,0:14:33.11:0,33,1302	0/0:27,0:26:63.21:0,63,2512	0/0:27,0:27:75.24:0,75,2898	0/0:10,0:10:30.10:0,30,1260
chr10	85948787	.	TA	T	348.99	PASS	AC=6;AF=0.158;AN=38;BaseQRankSum=3.192;DP=116;FS=0.000;HRun=7;HaplotypeScore=28.0967;InbreedingCoeff=0.6165;MQ=70.56;MQ0=3;MQRankSum=-0.962;QD=17.45;ReadPosRankSum=2.146;VQSLOD=2.3896;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:18.05:0,18,212	./.	0/0:5,0:6:12.15:0,12,142	0/0:3,0:3:8.77:0,9,65	0/0:4,0:4:9.03:0,9,113	0/0:6,0:6:12.04:0,12,151	./.	0/0:23,0:21:51.15:0,51,619	0/0:6,0:6:14.96:0,15,166	1/1:1,2:3:6.01:61,6,0	1/1:0,1:1:3.01:31,3,0	0/0:2,0:2:6.02:0,6,75	./.	./.	0/0:1,0:1:3.01:0,3,38	0/0:3,0:3:9.03:0,9,113	1/1:1,15:15:38.94:371,39,0	0/0:10,0:9:18.06:0,18,227	./.	./.	0/0:2,0:1:3:0,3,25	./.	./.	./.	0/0:5,0:5:9.03:0,9,113	0/0:3,0:3:9.03:0,9,113	0/0:7,0:7:15.05:0,15,188	0/0:7,0:7:12.04:0,12,151
chr10	85950134	.	AAAATCACGCTCATCT	A	5265.15	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.436;DP=812;FS=1.152;HRun=0;HaplotypeScore=324.8857;InbreedingCoeff=0.9281;MQ=85.39;MQ0=0;MQRankSum=-8.233;QD=49.21;ReadPosRankSum=0.370;VQSLOD=3.7643;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:69.24:0,69,4786	1/1:1,6:7:15.05:635,15,0	0/0:32,0:32:45.15:0,45,2165	0/0:21,0:21:42.08:0,42,1879	0/0:36,0:36:84.29:0,84,5607	0/0:39,0:38:99:0,99,6229	0/0:26,0:26:60.21:0,60,3912	0/0:35,0:35:66.23:0,66,3949	0/0:39,0:39:99:0,105,7327	1/1:20,26:46:65.88:1853,66,0	1/1:5,24:29:63.13:2397,63,0	0/0:37,0:37:93.32:0,93,6052	0/0:35,0:35:69.24:0,69,4708	0/0:26,0:26:60.21:0,60,4109	0/0:36,0:36:81.28:0,81,5370	0/0:33,0:33:84.29:0,84,5359	1/1:8,6:14:3.01:127,3,0	1/1:6,5:11:6.02:254,6,0	0/0:22,0:22:39.13:0,39,2119	0/0:43,0:43:99:0,108,7043	0/0:33,0:33:69.24:0,69,4713	0/0:29,0:29:63.22:0,63,4444	0/0:32,0:32:78.25:0,78,5179	0/0:22,0:22:51.16:0,51,3386	0/0:21,0:21:60.21:0,60,3731	0/0:28,0:28:81.27:0,81,5104	0/0:31,0:31:84.29:0,84,5657	0/0:15,0:15:36.12:0,36,2602
chr10	85951047	.	C	CA	1426.18	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.108;DP=552;FS=1.306;HRun=7;HaplotypeScore=63.3556;InbreedingCoeff=0.9847;MQ=64.35;MQ0=1;MQRankSum=-0.639;QD=24.59;ReadPosRankSum=-0.776;VQSLOD=3.8022;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:34:72.21:859,72,0	0/0:8,0:8:24.04:0,24,232	0/0:11,0:10:23.98:0,24,220	0/0:13,0:12:30.03:0,30,282	0/0:15,0:15:28.45:0,28,287	0/0:18,0:18:39.05:0,39,376	1/1:3,21:24:57.17:689,57,0	0/0:26,0:26:63.08:0,63,604	0/0:20,0:20:57.09:0,57,550	0/0:21,0:21:42.06:0,42,406	0/0:14,0:14:36:0,36,333	0/0:17,0:17:42.06:0,42,405	0/0:23,0:23:57.07:0,57,550	0/0:26,0:26:72.10:0,72,690	0/0:31,0:31:90.12:0,90,857	0/0:15,0:15:45.07:0,45,435	0/0:27,0:27:75.12:0,75,724	0/0:14,0:14:36.05:0,36,347	0/0:16,0:16:48.08:0,48,464	0/0:25,0:25:60.09:0,60,579	0/0:33,0:33:75.09:0,75,724	0/0:16,0:16:33.05:0,33,319	0/0:7,0:7:18.01:0,18,168	0/0:27,0:27:75.10:0,75,719	0/0:15,0:15:42.07:0,42,405	0/0:23,0:23:60.09:0,60,580	0/0:28,0:28:75.12:0,75,724	0/0:5,0:5:15.02:0,15,145
chr10	85951766	.	GAGTGATGGCTCAGC	G	3499.68	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.403;DP=441;FS=0.000;HRun=0;HaplotypeScore=253.6971;InbreedingCoeff=0.9408;MQ=72.90;MQ0=0;MQRankSum=-8.665;QD=62.49;ReadPosRankSum=1.897;VQSLOD=3.0196;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.28:0,81,5533	1/1:6,2:8:3.01:127,3,0	0/0:12,0:12:36.12:0,36,2221	0/0:24,0:24:66.23:0,66,3659	0/0:24,0:24:72.25:0,72,4942	0/0:15,0:14:45.15:0,45,3065	0/0:31,0:31:93.24:0,93,5613	0/0:19,0:19:45.15:0,45,2753	0/0:10,0:10:30.10:0,30,2109	1/1:5,11:16:33.11:1395,33,0	1/1:6,6:12:12.04:507,12,0	0/0:13,0:13:39.12:0,39,2231	0/0:10,0:10:30.10:0,30,2051	0/0:13,0:13:39.13:0,39,2602	0/0:14,0:14:42.13:0,42,2653	0/0:15,0:15:39.13:0,39,2465	1/1:4,8:12:24.08:964,24,0	1/1:5,3:8:12.04:507,12,0	0/0:9,0:9:27.08:0,27,1499	0/0:11,0:11:30.10:0,30,1895	0/0:36,0:36:99:0,105,6571	0/0:8,0:8:24.07:0,24,1501	0/0:15,0:15:42.13:0,42,2416	0/0:26,0:26:75.26:0,75,5013	0/0:13,0:13:39.13:0,39,2560	0/0:15,0:15:39.13:0,39,2448	0/0:12,0:12:36.12:0,36,2258	0/0:9,0:9:24.08:0,24,1677
chr10	85951884	.	A	ACCC	903.57	PASS	AB=0.879;AC=6;AF=0.111;AN=54;BaseQRankSum=5.911;DP=584;FS=6.580;HRun=0;HaplotypeScore=69.8978;InbreedingCoeff=0.2046;MQ=29.11;MQ0=197;MQRankSum=-3.243;QD=6.95;ReadPosRankSum=2.270;VQSLOD=1.3176;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:14:34.93:0,35,541	0/1:14,1:12:54.64:55,0,278	./.	0/0:17,0:7:19.16:0,19,163	0/0:28,0:25:71.45:0,71,1097	0/0:24,0:15:36.12:0,36,600	0/0:17,0:12:33.11:0,33,567	0/0:43,0:26:67.58:0,68,1094	0/0:14,0:9:21.05:0,21,340	0/1:24,10:23:99:540,0,242	0/1:22,3:17:76.29:76,0,432	0/0:13,0:9:26.45:0,26,380	0/0:13,0:11:24.08:0,24,366	0/0:15,0:12:36.12:0,36,594	0/0:16,0:13:39.06:0,39,623	0/0:10,0:6:15.05:0,15,237	0/1:28,3:9:99:143,0,149	1/1:21,0:8:17.08:218,17,0	0/0:24,0:12:33.11:0,33,565	0/0:27,0:21:52.32:0,52,801	0/0:5,0:1:3.01:0,3,38	0/0:8,0:6:16.61:0,17,257	0/0:12,0:11:30.02:0,30,456	0/0:21,0:6:9.03:0,9,160	0/0:20,0:14:30.10:0,30,475	0/0:28,0:20:58.44:0,58,959	0/0:20,0:12:30.09:0,30,501	0/0:41,0:11:18.06:0,18,314
chr10	85952560	.	AT	A	1537.04	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=8.743;DP=442;FS=4.397;HRun=8;HaplotypeScore=45.3130;InbreedingCoeff=0.8142;MQ=62.96;MQ0=5;MQRankSum=0.913;QD=13.03;ReadPosRankSum=1.762;VQSLOD=2.5894;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1287	1/1:5,0:5:14.34:81,14,0	0/0:36,0:11:2.05:0,2,101	0/1:29,0:11:1.92:2,0,56	0/0:24,0:24:66.18:0,66,774	0/0:17,0:17:39.12:0,39,471	0/0:7,0:7:15.05:0,15,181	0/0:37,0:37:95.86:0,96,1148	0/0:9,0:9:15.02:0,15,167	1/1:13,1:14:35.89:304,36,0	1/1:21,0:21:55.20:380,55,0	0/0:4,0:4:12.04:0,12,145	0/0:7,0:7:18.06:0,18,217	0/0:13,0:13:27.07:0,27,316	0/0:9,0:9:21.06:0,21,254	0/0:11,0:11:24.07:0,24,289	1/1:24,0:24:61.75:420,62,0	1/1:1,24:25:54.09:521,54,0	0/0:18,0:18:45.12:0,45,529	0/0:16,0:16:41.77:0,42,458	0/0:5,0:5:15.05:0,15,181	0/0:2,0:2:3.01:0,3,36	0/0:3,0:3:9.03:0,9,108	0/0:7,0:7:15.03:0,15,169	0/0:15,0:15:36.11:0,36,434	0/0:20,0:20:51.16:0,51,614	0/0:19,0:19:54:0,54,627	0/0:6,0:6:15.05:0,15,181
chr10	85952569	.	A	AT	820.59	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=6.763;DP=423;FS=5.762;HRun=10;HaplotypeScore=45.6583;InbreedingCoeff=0.7710;MQ=61.68;MQ0=5;MQRankSum=0.379;QD=12.62;ReadPosRankSum=-0.182;VQSLOD=2.7449;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,2:38:56.90:0,57,660	1/1:6,0:6:14.73:104,15,0	0/0:31,0:6:5.37:0,5,24	0/0:25,0:9:6.92:0,7,56	0/0:24,2:26:0.90:0,1,208	0/0:15,0:15:35.90:0,36,287	0/0:8,0:8:14.96:0,15,123	0/0:34,0:34:71.87:0,72,587	0/0:9,0:9:23.91:0,24,190	1/1:11,0:11:17.97:149,18,0	1/1:20,0:20:50.29:364,50,0	0/0:6,0:6:14.98:0,15,123	0/0:6,0:6:14.98:0,15,123	0/0:11,0:12:22.98:0,23,174	0/0:10,0:10:17.93:0,18,147	0/0:8,0:8:14.96:0,15,120	1/1:28,0:28:47.46:357,47,0	0/0:27,0:27:59.87:0,60,486	0/0:15,0:15:17.95:0,18,146	0/0:14,0:14:26.94:0,27,220	0/0:5,0:5:5.97:0,6,49	./.	0/0:4,0:4:2.99:0,3,24	0/0:4,0:5:5.96:0,6,49	0/0:12,0:12:23.95:0,24,197	0/0:18,0:18:38.94:0,39,318	0/0:19,0:19:40.93:0,41,321	0/0:9,0:9:14.95:0,15,123
chr10	85952926	.	AGGTCCCAG	A	6376.45	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.673;DP=503;FS=6.498;HRun=0;HaplotypeScore=134.2149;InbreedingCoeff=0.9835;MQ=93.50;MQ0=0;MQRankSum=-9.604;QD=57.45;ReadPosRankSum=-1.028;VQSLOD=4.4045;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.21:0,60,2463	0/0:5,0:5:15.05:0,15,663	0/0:29,0:29:81.28:0,81,2851	0/0:24,0:25:62.96:0,63,2428	0/0:12,0:12:33.11:0,33,1396	0/0:18,0:18:54.19:0,54,2288	0/0:32,0:32:90.31:0,90,3551	1/1:2,28:30:84.20:2006,84,0	0/0:11,0:10:30.10:0,30,1303	0/0:27,0:27:81.28:0,81,3465	0/0:9,0:9:27.09:0,27,1045	0/0:13,0:13:39.13:0,39,1576	0/0:11,0:11:33.11:0,33,1461	0/0:16,0:16:48.16:0,48,2022	0/0:12,0:12:36.12:0,36,1526	0/0:10,0:10:30.10:0,30,1246	0/0:24,0:24:69.21:0,69,2774	0/0:35,0:35:93.32:0,93,4025	1/1:1,9:10:27.09:744,27,0	1/1:0,6:6:18.06:458,18,0	1/1:5,21:26:21.54:465,22,0	0/0:14,0:14:30.10:0,30,1332	0/0:18,0:18:54.16:0,54,2302	0/0:32,0:32:87.30:0,87,3467	0/0:18,0:18:54.19:0,54,2410	1/1:0,15:15:45.15:1242,45,0	1/1:3,17:20:42.14:1204,42,0	1/1:0,4:4:9.03:258,9,0
chr10	85952984	.	TCACA	T	319.15	PASS	AB=0.981;AC=15;AF=0.326;AN=46;BaseQRankSum=1.344;DP=482;FS=1.262;HRun=0;HaplotypeScore=93.0457;InbreedingCoeff=0.3729;MQ=62.88;MQ0=15;MQRankSum=-1.750;QD=1.58;ReadPosRankSum=-0.752;VQSLOD=1.1974;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:21.07:0,21,384	0/0:5,0:5:3.01:0,3,70	./.	./.	0/0:10,0:10:6.02:0,6,134	0/0:10,0:10:12.04:0,12,224	1/1:25,5:28:3.48:46,3,0	0/0:23,0:23:1.82:0,2,5	./.	0/0:25,0:24:14.33:0,14,201	0/0:7,0:7:3.01:0,3,68	0/0:10,0:10:6.91:0,7,108	0/0:13,0:13:15.45:0,15,276	0/0:17,0:17:12.04:0,12,217	0/0:11,0:11:6.02:0,6,82	0/1:18,0:18:24.47:24,0,248	0/1:31,1:32:12.85:13,0,423	0/0:23,0:23:12.92:0,13,200	./.	1/1:8,0:8:6:51,6,0	0/1:35,0:31:22.59:23,0,164	0/0:12,0:11:3:0,3,25	1/1:15,1:15:2.96:20,3,0	1/1:34,1:35:11.53:147,12,0	0/0:17,0:15:5.71:0,6,130	1/1:10,0:11:6:55,6,0	1/1:15,1:15:6.02:87,6,0	./.
chr10	85953955	.	G	GTATTAAGTGTAATCAT	8970.88	PASS	AB=0.972;AC=11;AF=0.196;AN=56;BaseQRankSum=-4.331;DP=661;FS=4.213;HRun=0;HaplotypeScore=256.1720;InbreedingCoeff=0.8802;MQ=80.51;MQ0=0;MQRankSum=-9.144;QD=67.45;ReadPosRankSum=0.415;VQSLOD=4.2838;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,4545	1/1:2,5:10:15.05:808,15,0	0/0:22,0:22:54.18:0,54,1593	0/0:13,0:13:30.10:0,30,988	0/0:30,0:30:81.28:0,81,3225	0/0:19,0:19:54.15:0,54,1879	0/0:21,0:21:60.21:0,60,2283	0/0:37,0:37:87.27:0,87,3241	0/0:16,0:16:42.14:0,42,1582	1/1:5,12:25:57.20:3258,57,0	1/1:6,17:31:39.13:2608,39,0	0/0:22,0:22:54.19:0,54,2261	0/0:23,0:23:60.18:0,60,2403	0/0:26,0:26:75.26:0,75,2980	0/0:27,0:27:75.23:0,75,2728	0/0:26,0:26:75.24:0,75,3118	1/1:8,4:17:21.07:755,21,0	1/1:2,7:15:18.06:1400,18,0	0/0:25,0:25:69.24:0,69,2566	0/0:23,0:23:63.22:0,63,2423	0/0:17,0:17:51.18:0,51,2224	0/0:30,0:30:90.31:0,90,3598	0/0:22,0:22:57.20:0,57,2108	0/0:16,0:16:42.12:0,42,1741	0/0:25,0:25:63.22:0,63,2626	0/1:34,1:35:99:143,0,3452	0/0:32,0:32:84.29:0,84,3664	0/0:16,0:16:33.11:0,33,1402
chr10	85956331	.	GGAAGGACA	G	307.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.415;DP=637;FS=0.000;HRun=0;HaplotypeScore=150.7601;InbreedingCoeff=0.9700;MQ=62.70;MQ0=1;MQRankSum=-4.485;QD=30.70;ReadPosRankSum=0.708;VQSLOD=3.3189;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:84.27:0,84,3059	0/0:9,0:9:24.08:0,24,922	0/0:19,0:12:24.08:0,24,513	0/0:18,0:13:17.54:0,18,305	0/0:35,0:35:99:0,102,3862	0/0:24,0:24:60.21:0,60,2321	0/0:28,0:28:81.28:0,81,2715	0/0:21,0:21:48.15:0,48,1425	0/0:21,0:21:63.22:0,63,2424	0/0:27,0:27:72.23:0,72,2588	0/0:14,0:14:39.11:0,39,1480	0/0:19,0:19:54.19:0,54,2105	0/0:21,0:21:51.17:0,51,1973	0/0:20,0:20:45.15:0,45,1747	0/0:16,0:16:39.13:0,39,1601	0/0:25,0:25:66.23:0,66,2320	0/0:47,0:47:72.69:0,73,4411	1/1:2,8:10:15.05:395,15,0	0/0:24,0:24:54.16:0,54,1437	0/0:26,0:26:69.24:0,69,2466	0/0:17,0:17:42.14:0,42,1457	0/0:21,0:21:57.16:0,57,1953	0/0:19,0:19:42.14:0,42,1570	0/0:22,0:22:57.20:0,57,2137	0/0:28,0:28:78.27:0,78,2687	0/0:30,0:30:75.26:0,75,2989	0/0:32,0:32:81.28:0,81,2801	0/0:9,0:9:27.09:0,27,1121
chr10	85958880	.	A	AT	3894.25	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-7.058;DP=358;FS=2.204;HRun=0;HaplotypeScore=39.4693;InbreedingCoeff=0.9609;MQ=70.51;MQ0=0;MQRankSum=-1.318;QD=39.74;ReadPosRankSum=-0.570;VQSLOD=3.3291;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:16:48.16:729,48,0	1/1:3,3:6:18.01:249,18,0	0/0:11,0:9:17.21:0,17,241	0/0:3,0:3:3.01:0,3,41	0/0:19,0:19:54.17:0,54,737	0/0:9,0:9:27.09:0,27,377	1/1:1,17:18:40.99:646,41,0	0/0:22,0:22:57.18:0,57,768	0/0:6,0:6:18.06:0,18,251	1/1:1,19:20:57.18:864,57,0	1/1:0,8:8:24.08:364,24,0	0/0:7,0:7:21.07:0,21,293	0/0:9,0:9:27.08:0,27,362	0/0:8,0:8:24.08:0,24,335	0/0:18,0:18:54.18:0,54,755	0/0:15,0:15:45.13:0,45,584	1/1:2,13:15:33.04:487,33,0	1/1:0,14:14:36.12:556,36,0	0/0:16,0:16:48.14:0,48,652	0/0:21,0:21:63.21:0,63,875	0/0:10,0:10:30.10:0,30,419	0/0:7,0:7:21.07:0,21,294	0/0:8,0:8:24.08:0,24,333	0/0:11,0:11:33.11:0,33,461	0/0:18,0:18:54.14:0,54,733	0/0:17,0:17:48.15:0,48,651	0/0:15,0:15:45.10:0,45,592	0/0:10,0:10:30.10:0,30,419
chr10	85958911	.	TACAC	T	859.05	PASS	AB=0.764;AC=21;AF=0.420;AN=50;BaseQRankSum=3.745;DP=422;FS=0.988;HRun=0;HaplotypeScore=83.0945;InbreedingCoeff=0.5283;MQ=60.89;MQ0=10;MQRankSum=-0.982;QD=4.41;ReadPosRankSum=-1.843;VQSLOD=1.6233;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:6.01:56,6,0	0/1:2,1:7:32.67:33,0,35	./.	./.	0/0:24,0:23:30.08:0,30,599	0/0:9,0:9:3.01:0,3,43	./.	1/1:19,0:19:2.97:20,3,0	0/0:10,0:10:15.03:0,15,278	0/1:23,0:26:20.07:20,0,155	0/1:10,2:12:37.61:38,0,74	0/0:14,0:14:18.06:0,18,396	0/0:7,0:7:11.91:0,12,197	0/0:13,0:14:11.78:0,12,224	0/0:19,0:19:26.88:0,27,551	0/0:16,0:15:30.07:0,30,602	0/0:12,0:14:19.05:0,19,147	1/1:10,0:11:2.31:26,2,0	1/1:8,3:11:8.99:113,9,0	1/1:23,2:25:6.02:93,6,0	1/1:13,4:16:6.02:93,6,0	0/0:11,0:11:12.02:0,12,209	0/0:10,0:9:6.02:0,6,141	0/0:18,0:18:33.11:0,33,711	0/0:18,0:18:21.05:0,21,411	1/1:14,3:17:4.66:91,5,0	1/1:11,10:22:24.07:355,24,0	1/1:2,2:4:6.02:93,6,0
chr10	85959675	.	A	AC	1003.05	PASS	AB=0.808;AC=8;AF=0.143;AN=56;BaseQRankSum=-5.560;DP=412;FS=0.634;HRun=9;HaplotypeScore=51.5683;InbreedingCoeff=0.6516;MQ=70.68;MQ0=1;MQRankSum=-1.466;QD=14.13;ReadPosRankSum=-0.529;VQSLOD=3.1582;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:68.95:0,69,592	1/1:1,4:5:12.03:133,12,0	0/1:16,0:14:7.92:8,0,54	0/0:23,0:20:24.36:0,24,199	0/0:19,0:19:52.94:0,53,431	0/0:19,0:19:41.95:0,42,355	0/0:14,0:14:26.99:0,27,234	0/0:15,0:15:18.78:0,19,156	0/0:20,0:20:47.98:0,48,416	1/1:5,7:12:24.52:259,25,0	0/1:3,5:8:15.20:57,0,15	0/0:13,0:13:38.99:0,39,338	0/0:12,0:12:32.99:0,33,286	0/0:14,1:15:11.81:0,12,328	0/0:17,0:17:41.96:0,42,361	0/0:11,0:11:32.99:0,33,286	1/1:2,27:29:63.09:695,63,0	0/0:1,0:10:16.30:0,16,48	0/0:15,2:16:4.11:0,4,295	0/0:13,0:13:32.98:0,33,286	0/0:10,0:10:23.99:0,24,208	0/0:13,0:13:29.99:0,30,259	0/0:14,0:14:29.93:0,30,252	0/0:21,0:21:50.95:0,51,438	0/0:8,0:8:20.95:0,21,173	0/0:14,0:14:32.98:0,33,283	0/0:15,0:15:44.99:0,45,389	0/0:2,0:2:6:0,6,52
chr10	85959997	.	CCAAT	C	3955.04	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.730;DP=581;FS=0.924;HRun=0;HaplotypeScore=95.8549;InbreedingCoeff=0.9509;MQ=72.97;MQ0=0;MQRankSum=-2.884;QD=38.03;ReadPosRankSum=1.965;VQSLOD=4.0193;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:54.08:0,54,1150	1/1:1,5:6:12.04:200,12,0	0/0:23,0:22:30.14:0,30,894	0/0:18,0:17:31.40:0,31,749	0/0:26,0:26:72.25:0,72,1728	0/0:18,0:18:45.15:0,45,1099	0/0:16,0:16:39.13:0,39,964	0/0:40,0:40:85.52:0,86,1955	0/0:10,0:10:21.07:0,21,519	1/1:3,25:28:72.25:1200,72,0	1/1:3,22:25:57.19:950,57,0	0/0:19,0:19:48.16:0,48,1173	0/0:14,0:14:36.12:0,36,889	0/0:21,0:21:48.16:0,48,1172	0/0:29,0:29:66.23:0,66,1591	0/0:21,0:21:54.19:0,54,1321	1/1:2,24:26:60.20:1003,60,0	1/1:7,12:19:36.12:602,36,0	0/0:22,0:22:48.15:0,48,1080	0/0:26,0:26:69.24:0,69,1667	0/0:14,0:14:36.12:0,36,889	0/0:19,0:19:57.19:0,57,1361	0/0:21,0:21:48.16:0,48,1134	0/0:5,0:5:12.04:0,12,297	0/0:30,0:30:81.28:0,81,1914	0/0:20,1:21:4.03:0,4,1145	0/0:32,0:31:93.32:0,93,2279	0/0:10,0:10:30.10:0,30,741
chr10	85960954	.	AAAAAGAAAAAG	A	672.21	PASS	AB=0.796;AC=8;AF=0.143;AN=56;BaseQRankSum=-1.169;DP=492;FS=0.000;HRun=0;HaplotypeScore=122.8275;InbreedingCoeff=0.6986;MQ=58.67;MQ0=16;MQRankSum=0.021;QD=11.02;ReadPosRankSum=-2.217;VQSLOD=1.9972;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:12.04:0,12,293	1/1:4,0:4:8.70:85,9,0	0/0:52,0:9:11.93:0,12,151	0/0:40,0:12:12.85:0,13,199	0/0:26,0:26:55.28:0,55,1755	0/0:9,0:9:17.89:0,18,856	0/0:15,0:15:38.37:0,38,921	0/0:24,0:22:57.19:0,57,1654	0/0:7,0:7:17.68:0,18,479	1/1:15,0:15:29.73:364,30,0	0/1:5,11:16:0.85:216,0,1	0/1:6,0:6:17.64:18,0,216	0/0:18,0:18:45.32:0,45,1412	0/0:10,0:10:24.08:0,24,963	0/0:18,0:18:26.44:0,26,783	0/0:18,0:18:48.52:0,49,1771	1/1:20,0:19:15.22:137,15,0	0/0:10,0:9:25.77:0,26,471	0/0:10,0:9:19.60:0,20,738	0/0:21,0:20:41.88:0,42,1389	0/0:11,0:11:8.37:0,8,778	0/0:12,0:12:6.86:0,7,765	0/0:12,0:12:18.95:0,19,676	0/0:25,0:25:54.71:0,55,1432	0/0:12,0:12:27.57:0,28,951	0/0:29,0:28:45.82:0,46,2040	0/0:18,0:18:50.93:0,51,1768	0/0:9,0:9:14.95:0,15,474
chr10	85960957	.	AAG	A	778	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=4.662;DP=485;FS=17.204;HRun=0;HaplotypeScore=59.5058;InbreedingCoeff=0.3878;MQ=56.94;MQ0=15;MQRankSum=-0.588;QD=3.99;ReadPosRankSum=-3.393;VQSLOD=-0.2993;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:25:11.97:122,12,0	0/1:4,0:4:7.48:40,0,7	0/1:47,0:7:2.56:3,0,15	0/0:38,0:11:7.93:0,8,83	0/1:26,0:26:5.66:6,0,361	0/0:10,0:10:19.57:0,20,196	1/1:11,3:14:39.02:317,39,0	0/0:26,0:24:30.34:0,30,466	0/0:7,0:7:3.81:0,4,101	0/1:15,0:15:38.43:171,0,38	1/1:15,0:15:21.36:115,21,0	0/1:6,0:6:11.98:12,0,54	0/0:18,0:18:26.89:0,27,337	0/0:11,0:11:23.28:0,23,265	0/0:18,0:18:21.37:0,21,181	0/0:19,0:19:21.54:0,22,415	0/1:21,0:20:3.66:4,0,32	1/1:11,0:10:8.85:154,9,0	0/1:11,0:10:1.31:1,0,181	0/0:20,0:19:37.91:0,38,348	0/0:10,0:10:23.58:0,24,220	0/0:12,0:12:6.50:0,6,210	0/0:13,0:13:6.83:0,7,190	0/0:24,0:24:18.69:0,19,298	0/0:13,0:13:14.11:0,14,256	0/0:24,0:23:15.59:0,16,488	0/0:19,0:19:28.58:0,29,411	0/0:8,0:8:14.52:0,15,118
chr10	85961239	.	A	AG	618.93	PASS	AB=0.958;AC=13;AF=0.232;AN=56;BaseQRankSum=7.290;DP=373;FS=5.403;HRun=0;HaplotypeScore=59.1072;InbreedingCoeff=0.4096;MQ=57.27;MQ0=15;MQRankSum=-1.573;QD=4.58;ReadPosRankSum=1.502;VQSLOD=2.4380;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:50.55:0,51,473	1/1:3,0:3:5.70:31,6,0	0/0:35,0:7:14.57:0,15,86	0/0:24,0:11:8.13:0,8,116	0/0:17,0:17:35.80:0,36,296	0/0:16,0:15:44.84:0,45,381	0/0:11,0:11:33:0,33,332	0/1:25,0:25:76.72:77,0,283	0/0:12,0:11:29.12:0,29,236	1/1:9,1:10:10.12:81,10,0	1/1:18,7:24:41.81:302,42,0	0/0:11,0:9:23.30:0,23,153	0/0:6,0:6:14.91:0,15,110	0/0:6,0:6:10.22:0,10,83	0/0:12,0:12:28.53:0,29,282	0/0:7,0:7:20.38:0,20,143	1/1:8,10:17:12.74:110,13,0	0/0:12,0:11:21.30:0,21,155	0/1:14,5:17:39.35:39,0,205	0/1:14,0:14:14.60:15,0,150	0/0:3,0:3:4.21:0,4,23	0/0:5,0:5:14.99:0,15,131	0/0:8,0:8:23.80:0,24,173	0/0:11,0:9:20.92:0,21,169	0/0:9,0:7:14.95:0,15,132	0/1:15,0:14:30.02:102,0,30	0/0:12,0:11:19.91:0,20,184	0/1:6,0:5:30.30:30,0,56
chr10	85961243	.	A	AG	1639.19	PASS	AB=0.848;AC=20;AF=0.357;AN=56;BaseQRankSum=3.947;DP=381;FS=0.988;HRun=0;HaplotypeScore=56.7528;InbreedingCoeff=0.3279;MQ=53.58;MQ0=15;MQRankSum=1.186;QD=7.92;ReadPosRankSum=2.874;VQSLOD=3.5909;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,1:19:22.48:212,22,0	1/1:2,0:4:5.91:39,6,0	0/0:31,0:7:11.64:0,12,72	0/0:20,0:7:9.45:0,9,105	0/0:19,0:19:30.99:0,31,253	0/0:15,0:14:37.01:0,37,284	0/1:10,0:10:10.46:80,0,10	0/1:15,15:30:99:232,0,142	0/0:14,0:13:33.54:0,34,267	1/1:10,0:10:17.25:117,17,0	1/1:23,0:22:45.26:312,45,0	0/0:12,0:10:26.26:0,26,171	0/0:6,0:6:11.90:0,12,83	0/0:8,0:8:13.22:0,13,109	0/0:11,0:11:28.53:0,29,270	0/0:7,0:7:19.99:0,20,130	1/1:18,0:17:18.62:126,19,0	0/1:14,1:14:43.48:125,0,43	0/1:20,0:18:55.55:170,0,56	0/1:8,1:16:53.39:92,0,53	0/0:3,0:3:1.25:0,1,4	0/1:4,1:5:15.18:15,0,91	0/0:8,0:8:23.59:0,24,153	0/0:11,0:9:21.40:0,21,171	0/0:9,0:7:16.42:0,16,131	1/1:3,0:16:9.09:254,9,0	0/1:8,1:14:13.76:14,0,72	0/1:5,0:4:10.92:39,0,11
chr10	85961244	.	A	AGG	664.98	PASS	AB=0.849;AC=8;AF=0.143;AN=56;BaseQRankSum=7.031;DP=384;FS=5.597;HRun=0;HaplotypeScore=69.5589;InbreedingCoeff=0.2169;MQ=53.67;MQ0=15;MQRankSum=-3.047;QD=6.27;ReadPosRankSum=5.129;VQSLOD=2.1386;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:27.05:0,27,200	1/1:3,2:5:6:87,6,0	0/0:28,0:6:11.08:0,11,79	0/0:20,0:7:0.88:0,1,145	0/0:18,0:18:36.84:0,37,412	0/0:15,0:14:40.39:0,40,398	0/0:10,0:10:23.28:0,23,159	0/0:30,0:30:34.69:0,35,259	0/0:15,0:14:33.93:0,34,421	0/1:3,8:12:0.22:231,0,0	0/1:9,12:22:1.64:321,0,2	0/0:12,0:10:26.95:0,27,277	0/0:6,0:6:12.03:0,12,142	0/0:8,0:8:18.03:0,18,217	0/0:11,0:11:30.09:0,30,406	0/0:8,0:8:20.03:0,20,201	0/1:16,2:17:45.03:71,0,45	0/0:15,0:14:13.36:0,13,85	0/0:20,0:18:17.22:0,17,180	0/1:16,0:16:23.39:23,0,58	0/0:3,0:3:5.94:0,6,41	0/0:5,0:5:14.94:0,15,179	0/0:10,0:10:26.92:0,27,277	0/0:11,0:9:21.54:0,22,276	0/0:9,0:7:17.25:0,17,196	0/1:17,0:16:37.38:37,0,50	0/1:15,0:14:26.85:27,0,87	0/0:4,0:3:2.49:0,2,6
chr10	85961863	.	G	GA	2293.51	PASS	AB=0.711;AC=9;AF=0.161;AN=56;BaseQRankSum=-6.626;DP=560;FS=5.607;HRun=9;HaplotypeScore=55.2729;InbreedingCoeff=0.7227;MQ=67.76;MQ0=0;MQRankSum=-2.216;QD=22.49;ReadPosRankSum=-0.324;VQSLOD=4.2454;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:53.99:0,54,469	0/1:2,5:7:10.90:118,0,11	0/0:14,0:13:17.44:0,17,161	0/1:3,0:2:1.44:1,0,21	0/0:39,0:39:99:0,114,990	0/0:27,0:27:74.97:0,75,651	0/0:17,0:17:47.96:0,48,409	0/0:32,1:33:26.75:0,27,458	0/0:16,0:16:47.96:0,48,409	1/1:6,26:32:58.15:859,58,0	1/1:3,16:20:50.93:532,51,0	0/0:17,0:18:19.24:0,19,343	0/0:20,0:20:50.99:0,51,443	0/0:15,0:15:38.97:0,39,336	0/0:27,0:29:79.01:0,79,656	0/0:16,0:16:41.99:0,42,365	1/1:4,25:29:66.18:730,66,0	0/1:2,9:11:0.81:208,0,1	0/0:19,0:19:47.98:0,48,414	0/0:29,0:32:72.06:0,72,587	0/0:6,0:6:18:0,18,156	0/0:18,0:18:47.99:0,48,417	0/0:33,0:33:89.96:0,90,778	0/0:6,0:6:15:0,15,130	0/0:20,0:20:59.98:0,60,518	0/0:26,1:27:32.77:0,33,507	0/0:23,0:23:53.94:0,54,465	0/0:10,0:10:26.99:0,27,234
chr10	85963650	.	T	TG	476.81	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.071;DP=646;FS=6.196;HRun=1;HaplotypeScore=95.0902;InbreedingCoeff=0.9763;MQ=67.77;MQ0=8;MQRankSum=-0.905;QD=28.05;ReadPosRankSum=-0.019;VQSLOD=3.0724;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:63.06:0,63,749	0/0:8,0:8:24.05:0,24,275	0/0:51,0:15:26.95:0,27,261	0/0:53,0:21:45.05:0,45,384	0/0:28,0:28:74.63:0,75,872	0/0:24,0:24:45.97:0,46,724	0/0:10,0:10:19.17:0,19,211	0/0:34,0:34:83.82:0,84,549	0/0:18,0:17:39.11:0,39,476	0/0:21,0:21:45.44:0,45,615	0/0:20,0:20:54.13:0,54,625	0/0:16,0:16:45.04:0,45,510	0/0:28,0:27:75.12:0,75,868	0/0:20,0:19:54.10:0,54,600	0/0:21,0:21:60.14:0,60,694	0/0:19,0:19:54.12:0,54,627	0/0:18,0:18:35.67:0,36,419	1/1:0,17:17:39.13:572,39,0	0/0:27,0:26:65.88:0,66,451	0/0:28,0:28:58.57:0,59,341	0/0:8,0:8:17.07:0,17,101	0/0:15,0:15:36.50:0,36,489	0/0:23,0:23:51.74:0,52,641	0/0:24,0:23:55.66:0,56,627	0/0:22,0:22:59.82:0,60,685	0/0:23,0:23:50.29:0,50,362	0/0:26,0:26:25.12:0,25,167	0/0:11,0:11:22.42:0,22,133
chr10	85963664	.	G	GT	1692.83	PASS	AB=0.883;AC=14;AF=0.250;AN=56;BaseQRankSum=-2.435;DP=655;FS=30.533;HRun=12;HaplotypeScore=84.2167;InbreedingCoeff=0.3925;MQ=61.12;MQ0=13;MQRankSum=0.748;QD=8.77;ReadPosRankSum=-0.662;VQSLOD=0.2553;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:23,9:31:15.06:467,0,15	1/1:4,3:7:8.56:95,9,0	0/0:59,0:15:5:0,5,67	0/0:48,0:16:13.89:0,14,77	0/0:27,1:28:32.14:0,32,433	0/0:26,0:26:23.21:0,23,349	1/1:5,9:14:4.16:182,4,0	0/0:30,0:30:22.84:0,23,293	0/0:21,0:20:37.14:0,37,287	1/1:4,18:23:29.60:482,30,0	1/1:3,16:19:17.40:366,17,0	0/0:18,0:18:37.07:0,37,296	0/0:25,0:24:36:0,36,333	0/1:16,0:15:5.36:5,0,116	0/0:18,0:18:33.40:0,33,272	0/0:21,0:21:47.23:0,47,344	0/1:7,13:19:17.65:222,0,18	0/1:19,0:19:19.74:20,0,168	0/0:23,0:21:18.71:0,19,259	0/0:28,0:28:58.87:0,59,430	0/0:7,0:7:11.91:0,12,90	0/0:20,0:21:40.96:0,41,323	0/0:24,0:24:44.74:0,45,404	0/0:22,0:21:43.46:0,43,380	0/1:19,1:20:2.52:3,0,323	0/1:22,1:23:15.26:15,0,243	0/0:27,0:27:29.52:0,30,193	0/0:13,0:13:9.47:0,9,142
chr10	85966667	.	C	CT	926.51	PASS	AB=0.845;AC=12;AF=0.214;AN=56;BaseQRankSum=5.149;DP=648;FS=6.874;HRun=13;HaplotypeScore=89.2429;InbreedingCoeff=0.3760;MQ=78.83;MQ0=4;MQRankSum=-0.736;QD=4.59;ReadPosRankSum=-2.778;VQSLOD=1.3098;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,1:23:28.40:0,28,329	1/1:9,6:15:13.68:161,14,0	0/0:56,0:28:11.85:0,12,143	0/0:45,1:23:12.12:0,12,70	0/0:26,2:33:23.74:0,24,403	0/1:16,5:22:34.33:34,0,212	0/0:16,0:18:15.87:0,16,242	0/0:24,1:28:2.27:0,2,217	0/0:20,0:21:51.60:0,52,337	1/1:18,7:25:35.19:305,35,0	1/1:18,9:29:49.41:366,49,0	0/0:14,1:17:8.91:0,9,187	0/0:17,0:18:24.55:0,25,219	0/0:12,0:12:32.70:0,33,226	0/0:17,1:19:21.76:0,22,283	0/0:23,1:24:28.58:0,29,339	0/1:9,14:23:0.28:136,0,0	0/0:11,0:11:24.98:0,25,167	0/1:18,1:20:29.39:29,0,169	0/0:34,1:36:29.61:0,30,430	0/0:18,1:19:10.77:0,11,217	0/0:17,0:19:12.85:0,13,221	0/1:18,2:23:3.98:4,0,248	0/0:9,1:13:5.02:0,5,154	0/1:17,3:20:32.53:33,0,167	0/1:22,3:25:21.14:21,0,262	0/0:21,0:21:47.22:0,47,308	0/0:10,0:10:23.74:0,24,163
chr10	85968992	.	CT	C	782.96	PASS	AB=0.907;AC=17;AF=0.304;AN=56;BaseQRankSum=6.616;DP=562;FS=5.494;HRun=16;HaplotypeScore=77.2744;InbreedingCoeff=0.2681;MQ=74.22;MQ0=6;MQRankSum=-0.297;QD=3.14;ReadPosRankSum=3.101;VQSLOD=0.1021;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:22:45.15:0,45,231	1/1:6,6:14:19.17:142,19,0	0/0:49,1:19:19.83:0,20,150	0/0:24,0:14:7.15:0,7,44	0/1:20,5:27:13.12:13,0,297	0/0:14,0:16:9.13:0,9,204	0/0:11,0:19:41:0,41,216	0/0:22,0:22:24.22:0,24,293	0/0:11,2:12:2.52:0,3,111	1/1:16,8:25:24.85:168,25,0	1/1:3,21:24:47.06:295,47,0	0/1:11,3:15:24.34:24,0,122	0/0:14,0:15:22.17:0,22,170	0/0:12,0:12:16.78:0,17,127	0/1:21,3:24:0.31:0,0,300	0/1:12,2:16:14.70:15,0,171	1/1:2,16:19:34.12:236,34,0	0/1:18,0:18:18.86:19,0,53	0/1:18,0:18:0.10:0,0,125	0/0:23,0:24:71.28:0,71,541	0/1:8,0:8:3.06:3,0,79	0/0:12,0:14:32.74:0,33,254	0/1:20,2:23:15.18:15,0,182	0/0:17,3:21:8.72:0,9,273	0/0:15,2:18:17.49:0,17,223	0/0:19,1:20:20.90:0,21,264	0/0:20,1:23:8.68:0,9,267	0/1:13,4:18:24.21:24,0,237
chr10	85969080	.	AGAAG	A	3921.68	PASS	AB=1.000;AC=16;AF=0.296;AN=54;BaseQRankSum=7.062;DP=562;FS=3.180;HRun=0;HaplotypeScore=106.2898;InbreedingCoeff=0.8212;MQ=63.09;MQ0=2;MQRankSum=-0.776;QD=24.06;ReadPosRankSum=-1.725;VQSLOD=3.3573;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:37.02:40,0,37	0/0:12,0:12:36.10:0,36,640	./.	0/0:11,0:9:12.04:0,12,189	0/0:33,0:33:72.21:0,72,1441	0/0:20,0:20:51.09:0,51,995	0/1:22,0:22:13.18:58,0,13	1/1:4,11:15:33.05:444,33,0	0/0:16,0:15:39.13:0,39,734	0/0:28,0:28:66.20:0,66,1251	0/0:17,0:17:42.14:0,42,906	0/0:18,0:18:42.13:0,42,820	0/0:26,0:25:63.20:0,63,1279	0/0:23,0:23:57.18:0,57,1131	0/0:31,0:31:84.26:0,84,1741	0/0:16,0:16:42.14:0,42,992	0/0:35,0:35:94.04:0,94,1693	0/0:23,0:23:48.09:0,48,842	1/1:4,9:13:24.06:357,24,0	1/1:4,10:14:27.09:400,27,0	1/1:3,17:20:33.11:549,33,0	0/0:19,0:19:48.14:0,48,994	0/0:19,0:19:45.15:0,45,995	0/0:27,0:27:72.07:0,72,1471	0/0:14,0:14:39.11:0,39,799	1/1:1,15:16:45.12:677,45,0	1/1:4,20:24:48.11:742,48,0	1/1:11,6:17:42.13:654,42,0
chr10	85969088	.	GGAAGGAAGGAAGGAAA	G	661.59	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=2.590;DP=578;FS=1.183;HRun=0;HaplotypeScore=250.2775;InbreedingCoeff=0.6773;MQ=59.11;MQ0=3;MQRankSum=-3.374;QD=10.85;ReadPosRankSum=0.802;VQSLOD=2.4146;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:26:15.05:585,15,0	0/0:12,0:12:33.11:0,33,1473	0/0:6,0:3:3.01:0,3,77	0/0:12,0:8:15:0,15,311	0/0:30,0:30:66.21:0,66,3359	0/0:21,0:21:48.16:0,48,2545	1/1:7,13:20:8.92:181,9,0	0/0:18,0:17:12.40:0,12,651	0/0:16,0:16:45.14:0,45,1615	0/0:30,0:29:69.22:0,69,2996	0/0:20,0:20:54.16:0,54,2304	0/0:18,0:18:42.13:0,42,1878	0/0:25,0:24:60.18:0,60,2820	0/0:26,0:26:63.19:0,63,2380	0/0:31,0:31:84.28:0,84,4214	0/0:16,0:16:42.14:0,42,2658	0/0:34,0:35:89.81:0,90,3586	0/0:23,0:23:39.11:0,39,1606	0/1:15,0:15:14.89:15,0,690	0/0:14,0:14:27.09:0,27,795	0/0:22,0:22:42.14:0,42,1584	0/0:17,0:17:42.14:0,42,2172	0/0:18,0:18:45.14:0,45,2279	0/0:30,0:30:78.20:0,78,3556	0/0:15,0:15:36.10:0,36,1842	0/0:18,0:18:37.90:0,38,1384	0/0:25,0:24:46.71:0,47,1773	0/0:18,0:18:42.14:0,42,1508
chr10	85969104	.	A	AGAAG	3594.94	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.608;DP=568;FS=1.629;HRun=0;HaplotypeScore=107.7936;InbreedingCoeff=0.8957;MQ=58.63;MQ0=4;MQRankSum=2.623;QD=31.26;ReadPosRankSum=1.722;VQSLOD=3.4089;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:13.73:0,14,105	1/1:12,0:12:30.02:562,30,0	0/0:11,0:5:8.17:0,8,139	0/0:11,0:7:0.50:0,0,91	0/0:27,0:27:57.15:0,57,875	0/0:21,0:21:54.16:0,54,833	0/0:15,0:15:4.82:0,5,32	0/0:25,0:24:50.73:0,51,652	0/0:15,0:15:21.07:0,21,343	1/1:27,0:26:57.15:948,57,0	1/1:20,0:20:45.14:784,45,0	0/0:17,0:17:33.10:0,33,517	0/0:21,0:20:39.12:0,39,618	0/0:25,0:25:36.11:0,36,560	0/0:30,0:30:66.18:0,66,988	0/0:14,0:14:36.12:0,36,595	1/1:32,0:32:48.10:818,48,0	1/1:8,15:24:21.07:482,21,0	0/0:17,0:17:30.10:0,30,478	0/0:14,0:14:24.07:0,24,360	0/0:26,0:26:60.16:0,60,902	0/0:16,0:16:33.09:0,33,496	0/0:18,0:18:36.10:0,36,545	0/0:31,0:31:57.18:0,57,910	0/0:17,0:17:36.11:0,36,567	0/0:18,0:18:39.12:0,39,580	0/0:23,0:22:51.14:0,51,783	0/0:17,0:17:51.17:0,51,793
chr10	85969122	.	A	AAGGG	5213.79	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-7.043;DP=573;FS=4.849;HRun=0;HaplotypeScore=108.0849;InbreedingCoeff=0.8634;MQ=65.11;MQ0=5;MQRankSum=0.953;QD=48.28;ReadPosRankSum=2.036;VQSLOD=5.2966;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:41.83:0,42,361	1/1:0,12:13:33.06:801,33,0	0/0:27,0:16:38.74:0,39,448	0/0:21,0:14:32.75:0,33,333	0/0:25,0:25:75.14:0,75,1257	0/0:21,0:21:60.15:0,60,1101	0/0:17,0:17:15.02:0,15,152	0/0:24,0:24:71.79:0,72,1028	0/0:12,0:12:36.07:0,36,547	1/1:4,24:27:72.29:1724,72,0	1/1:8,9:17:51.12:1194,51,0	0/0:17,0:17:51.12:0,51,807	0/0:17,0:16:45.12:0,45,794	0/0:16,0:16:48.11:0,48,806	0/0:23,0:23:69.19:0,69,1229	0/0:15,0:15:45.12:0,45,795	1/1:16,12:28:39.82:1224,40,0	0/1:22,0:22:99:271,0,119	0/0:15,0:15:41.29:0,41,674	0/0:17,0:17:35.87:0,36,540	0/0:28,0:28:78.16:0,78,1283	0/0:13,0:13:39.07:0,39,662	0/0:15,0:15:42.12:0,42,744	0/0:27,0:27:66.17:0,66,1176	0/0:19,0:19:57.05:0,57,881	0/0:20,0:20:26.14:0,26,837	0/0:21,0:20:60.16:0,60,1048	0/0:20,0:20:60.16:0,60,1087
chr10	85969841	.	A	AGTGT	1162.79	PASS	AB=0.955;AC=9;AF=0.167;AN=54;BaseQRankSum=8.959;DP=630;FS=0.718;HRun=0;HaplotypeScore=109.1897;InbreedingCoeff=0.7931;MQ=56.13;MQ0=3;MQRankSum=-2.838;QD=9.61;ReadPosRankSum=-0.387;VQSLOD=2.9657;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,102,1584	1/1:11,3:13:8.78:133,9,0	0/0:23,0:11:11.41:0,11,167	0/0:27,0:15:22.98:0,23,330	0/0:31,0:31:84.04:0,84,1269	0/0:21,0:21:48.14:0,48,762	0/0:33,0:33:87.21:0,87,1356	0/0:30,0:28:66.12:0,66,943	0/0:15,0:15:42.13:0,42,698	1/1:11,14:27:45.56:706,46,0	./.	0/0:21,0:21:54.17:0,54,906	0/0:16,0:16:45.13:0,45,714	0/0:21,0:21:57.15:0,57,930	0/0:15,0:15:42.11:0,42,664	0/0:12,0:12:33.08:0,33,507	1/1:15,21:39:24.07:396,24,0	1/1:4,2:20:3.48:54,3,0	0/0:23,0:21:56.70:0,57,716	0/0:20,0:20:54.18:0,54,912	0/0:26,0:26:69.20:0,69,1091	0/0:16,0:16:39.12:0,39,650	0/0:12,0:12:33.09:0,33,496	0/0:29,0:30:72.19:0,72,1127	0/0:23,0:23:54.17:0,54,905	0/1:20,1:21:24.42:24,0,693	0/0:24,0:23:63.14:0,63,956	0/0:14,0:14:30.10:0,30,525
chr10	85969848	.	G	GTGTG	1162.83	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=8.876;DP=639;FS=0.718;HRun=0;HaplotypeScore=111.7750;InbreedingCoeff=0.7934;MQ=56.18;MQ0=3;MQRankSum=-2.685;QD=10.29;ReadPosRankSum=0.983;VQSLOD=2.9957;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,102,1584	1/1:7,5:12:8.78:133,9,0	0/0:19,0:7:11.41:0,11,167	0/0:28,0:14:25.93:0,26,349	0/0:33,0:33:84.04:0,84,1269	0/0:20,0:20:48.14:0,48,762	0/0:40,0:40:87.21:0,87,1356	0/0:27,0:25:66.12:0,66,943	0/0:16,0:16:42.13:0,42,698	1/1:27,0:27:45.56:706,46,0	./.	0/0:22,0:22:54.17:0,54,906	0/0:16,0:16:45.13:0,45,714	0/0:23,0:23:57.15:0,57,930	0/0:15,0:15:42.11:0,42,664	0/0:12,0:12:33.08:0,33,507	1/1:37,0:37:24.07:396,24,0	1/1:16,0:16:3.48:54,3,0	0/0:28,0:26:62.63:0,63,756	0/0:21,0:21:54.18:0,54,912	0/0:26,0:26:69.20:0,69,1091	0/0:17,0:17:39.12:0,39,650	0/0:13,0:13:33.09:0,33,496	0/0:31,0:30:72.19:0,72,1127	0/0:23,0:23:54.17:0,54,905	0/1:20,0:20:24.42:24,0,693	0/0:23,0:22:63.14:0,63,956	0/0:15,0:15:30.10:0,30,525
chr10	85971248	.	T	TA	1153.09	PASS	AB=0.933;AC=11;AF=0.196;AN=56;BaseQRankSum=-5.271;DP=436;FS=0.000;HRun=11;HaplotypeScore=38.4747;InbreedingCoeff=0.8404;MQ=58.45;MQ0=24;MQRankSum=1.855;QD=13.41;ReadPosRankSum=2.294;VQSLOD=2.9542;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:65.62:0,66,497	1/1:1,6:7:18.04:183,18,0	0/0:14,0:5:14.10:0,14,93	0/0:10,0:4:3.06:0,3,11	0/0:18,0:18:38.82:0,39,300	0/0:14,0:13:32.87:0,33,254	0/0:7,0:7:20.92:0,21,163	0/0:25,0:24:48.87:0,49,360	0/0:11,0:12:28.93:0,29,215	1/1:4,12:15:6.81:245,7,0	1/1:7,9:13:21.04:213,21,0	0/0:16,0:16:44.79:0,45,344	0/0:10,0:10:29.88:0,30,231	0/0:9,0:9:23.86:0,24,181	0/1:13,1:12:0.56:1,0,179	0/0:13,0:14:32.86:0,33,255	1/1:4,19:23:33.88:525,34,0	1/1:3,7:9:15.03:152,15,0	0/0:20,0:17:38.83:0,39,300	0/0:22,1:22:23.26:0,23,353	0/0:5,0:5:11.95:0,12,93	0/0:5,0:4:8.95:0,9,70	0/0:7,0:4:8.95:0,9,70	0/0:15,0:13:32.86:0,33,253	0/0:21,0:19:49.83:0,50,377	0/0:21,0:21:50.77:0,51,393	0/0:27,0:25:68.40:0,68,516	0/0:24,0:23:59.77:0,60,464
chr10	85972321	.	TA	T	1279	PASS	AB=0.740;AC=14;AF=0.250;AN=56;BaseQRankSum=5.481;DP=578;FS=1.393;HRun=15;HaplotypeScore=69.9313;InbreedingCoeff=0.7132;MQ=68.33;MQ0=2;MQRankSum=-1.280;QD=7.75;ReadPosRankSum=1.842;VQSLOD=2.9972;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:15:0,15,132	0/0:13,0:13:32.98:0,33,284	0/0:21,0:16:11.65:0,12,142	0/0:12,0:7:11.96:0,12,94	0/0:35,0:42:99:0,101,794	0/0:17,2:19:3.43:0,3,271	0/1:8,1:10:11.12:11,0,57	1/1:9,18:28:16.07:274,16,0	0/0:22,0:24:44.85:0,45,372	0/0:32,1:35:25.38:0,25,315	0/0:18,0:21:40.83:0,41,359	0/0:14,1:15:6.80:0,7,177	0/0:21,0:21:41.91:0,42,349	0/0:31,3:34:24.89:0,25,429	0/0:22,0:22:50.90:0,51,428	0/0:16,0:16:23.60:0,24,225	0/0:15,1:16:19.72:0,20,297	0/0:7,0:9:11.96:0,12,97	1/1:6,4:11:10.99:65,11,0	1/1:8,18:27:2.76:212,3,0	1/1:3,6:9:14.74:96,15,0	0/0:19,0:20:34.95:0,35,321	0/0:28,3:32:27.41:0,27,479	0/0:12,0:12:29.85:0,30,248	0/0:18,0:21:38.63:0,39,308	1/1:9,18:27:26.73:298,27,0	1/1:10,19:31:34.13:315,34,0	0/1:10,12:22:10.40:187,0,10
chr10	85974505	.	G	GTT	942.79	PASS	AB=0.946;AC=8;AF=0.143;AN=56;BaseQRankSum=-1.265;DP=597;FS=8.503;HRun=11;HaplotypeScore=73.9431;InbreedingCoeff=0.7498;MQ=64.96;MQ0=3;MQRankSum=1.259;QD=8.57;ReadPosRankSum=0.163;VQSLOD=0.7337;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,21:31:42.03:566,42,0	0/0:5,0:7:11.68:0,12,149	0/1:22,0:12:1.96:2,0,62	0/0:19,0:11:3.60:0,4,35	0/0:26,0:26:53.97:0,54,517	0/0:19,0:20:59.80:0,60,556	1/1:4,13:17:33.11:478,33,0	0/1:22,0:25:0.17:0,0,278	0/0:14,0:14:23.94:0,24,225	0/0:23,0:24:29.81:0,30,328	0/0:21,0:22:47.75:0,48,445	0/0:15,0:15:23.84:0,24,231	0/0:22,0:22:47.99:0,48,465	0/0:23,0:23:53.98:0,54,517	0/0:25,0:26:60.01:0,60,572	0/0:21,0:22:44.70:0,45,479	0/0:23,0:24:50.88:0,51,526	1/1:6,0:13:9.66:34,10,0	0/0:22,0:23:44.59:0,45,411	0/0:23,0:24:35.91:0,36,398	0/0:12,0:11:24.01:0,24,233	0/0:15,0:15:39.05:0,39,376	0/0:16,0:18:23.86:0,24,332	0/0:16,0:17:24.54:0,25,361	0/0:30,0:30:72.04:0,72,698	0/0:31,0:32:53.87:0,54,565	0/0:35,0:36:86.70:0,87,800	0/0:14,0:14:27.02:0,27,260
chr10	85975159	.	T	TA	2269.87	PASS	AB=0.889;AC=11;AF=0.196;AN=56;BaseQRankSum=6.709;DP=493;FS=7.821;HRun=9;HaplotypeScore=59.1510;InbreedingCoeff=0.8503;MQ=71.18;MQ0=0;MQRankSum=-0.563;QD=18.31;ReadPosRankSum=0.828;VQSLOD=3.4716;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:33:20.67:0,21,620	1/1:1,6:7:15.04:166,15,0	0/0:16,0:10:18.74:0,19,121	0/0:18,0:14:6.24:0,6,35	0/0:27,0:28:76.99:0,77,653	0/0:18,0:18:50.94:0,51,434	0/0:8,0:9:17.01:0,17,132	0/0:33,0:33:89.94:0,90,773	0/0:10,0:10:29.99:0,30,260	1/1:5,16:21:29.50:471,29,0	1/1:6,24:30:66.09:700,66,0	0/0:12,0:12:29.98:0,30,260	0/0:7,0:7:20.96:0,21,177	0/0:15,0:15:38.99:0,39,338	0/0:13,0:13:38.99:0,39,338	0/0:18,0:18:47.99:0,48,417	1/1:5,22:27:14.37:611,14,0	1/1:1,14:15:42.11:465,42,0	0/0:19,0:20:46.41:0,46,412	0/0:33,0:33:92.95:0,93,804	0/0:11,0:11:32.98:0,33,282	0/0:9,0:9:21:0,21,182	0/0:13,0:13:35.99:0,36,313	0/0:7,0:7:17.99:0,18,156	0/0:23,0:23:62.98:0,63,546	0/1:21,3:24:33.56:34,0,429	0/0:15,0:15:44.99:0,45,391	0/0:7,0:7:21:0,21,182
chr10	85975857	.	C	CT	7188.17	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-15.752;DP=680;FS=4.927;HRun=2;HaplotypeScore=62.5955;InbreedingCoeff=0.9998;MQ=84.89;MQ0=0;MQRankSum=-1.380;QD=37.05;ReadPosRankSum=-1.703;VQSLOD=4.7707;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.24:0,81,991	0/0:15,0:15:45.08:0,45,527	0/0:23,0:21:57.01:0,57,632	0/0:25,0:24:58.22:0,58,672	0/0:28,0:27:75.23:0,75,929	0/0:28,0:28:84.23:0,84,1014	0/0:15,0:15:39.12:0,39,483	1/1:3,31:34:90.17:1130,90,0	0/0:22,0:22:63.20:0,63,779	0/0:39,0:39:99:0,111,1356	0/0:21,0:21:57.17:0,57,694	0/0:22,0:22:66.19:0,66,805	0/0:21,0:21:63.19:0,63,768	0/0:21,0:21:57.17:0,57,694	0/0:21,0:21:63.17:0,63,756	0/0:23,0:23:63.20:0,63,781	0/0:24,0:24:69.18:0,69,829	0/0:17,0:17:45.06:0,45,514	1/1:3,29:32:84.21:1117,84,0	1/1:1,22:23:60.20:864,60,0	1/1:1,29:30:78.26:1123,78,0	0/0:29,0:29:84.22:0,84,1001	0/0:22,0:22:66.16:0,66,769	0/0:19,0:19:54.17:0,54,669	0/0:21,0:21:60.18:0,60,732	1/1:1,28:29:84.26:1183,84,0	1/1:2,34:36:96.32:1382,96,0	1/1:0,10:10:27.09:389,27,0
chr10	85976445	.	C	CT	2480.75	PASS	AB=0.556;AC=9;AF=0.161;AN=56;BaseQRankSum=-9.554;DP=644;FS=6.263;HRun=8;HaplotypeScore=61.9163;InbreedingCoeff=0.8961;MQ=77.60;MQ0=0;MQRankSum=0.410;QD=25.57;ReadPosRankSum=1.095;VQSLOD=4.5349;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:36:97.98:0,98,864	1/1:1,10:11:27.08:311,27,0	0/0:18,0:14:10.12:0,10,149	0/0:23,0:20:20.66:0,21,189	0/0:15,0:15:41.99:0,42,376	0/0:24,0:24:56.99:0,57,509	0/0:30,0:30:71.99:0,72,649	0/0:30,0:30:68.75:0,69,609	0/0:31,0:31:72.07:0,72,725	1/1:3,20:24:35.48:601,35,0	0/1:2,8:10:0.42:235,0,0	0/0:25,0:25:68.90:0,69,603	0/0:24,0:24:65.94:0,66,584	0/0:26,0:26:75.01:0,75,678	0/0:40,0:40:99:0,102,933	0/0:16,0:16:45:0,45,407	1/1:1,29:31:84.08:949,84,0	1/1:4,17:21:48.14:549,48,0	0/0:12,0:12:30.01:0,30,274	0/0:21,0:21:60.02:0,60,545	0/0:38,0:38:99:0,108,947	0/0:17,0:17:48:0,48,430	0/0:25,0:25:72.02:0,72,653	0/0:18,0:18:36.01:0,36,329	0/0:18,1:19:7.38:0,7,320	0/0:26,0:26:72.02:0,72,655	0/0:26,0:26:59.89:0,60,536	0/0:6,0:6:11.98:0,12,101
chr10	85976687	.	GTGTGTGTGTGTGTGTGTGTGTGTA	G	252.65	PASS	AB=0.899;AC=6;AF=0.107;AN=56;BaseQRankSum=2.370;DP=428;FS=0.000;HRun=0;HaplotypeScore=176.7044;InbreedingCoeff=0.1126;MQ=46.82;MQ0=46;MQRankSum=-1.080;QD=2.78;ReadPosRankSum=-1.039;VQSLOD=1.9603;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:33.06:0,33,1173	1/1:6,0:6:3.48:58,3,0	0/0:16,0:3:9.02:0,9,91	0/0:17,0:3:6.01:0,6,57	0/0:15,0:15:27.06:0,27,1757	0/0:11,0:10:27.05:0,27,1794	0/0:11,0:9:6.48:0,6,139	0/0:18,0:14:37.85:0,38,930	0/0:8,0:8:24.08:0,24,1728	0/1:14,0:14:28.77:29,0,429	0/1:11,0:9:9.95:10,0,155	0/0:20,0:16:24.53:0,25,1300	0/0:8,0:7:18.52:0,19,1217	0/0:11,0:10:26.90:0,27,1996	0/0:11,0:10:17.93:0,18,400	0/0:10,0:9:21.04:0,21,1203	0/1:26,0:25:87.14:87,0,627	0/1:11,23:31:99:186,0,139	0/0:14,0:13:38.45:0,38,985	0/0:18,0:18:30.10:0,30,1117	0/0:28,0:21:35.84:0,36,1558	0/0:10,0:10:21.03:0,21,1374	0/0:9,0:8:14.98:0,15,740	0/0:25,0:23:45.04:0,45,2232	0/0:17,0:17:27.08:0,27,1400	0/0:15,0:14:42.05:0,42,1566	0/0:17,0:16:42.01:0,42,1215	0/0:4,0:3:4.83:0,5,141
chr10	85976693	.	GTGTGTGTGTGTGTGTGTA	G	1089.71	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=1.119;DP=403;FS=2.585;HRun=0;HaplotypeScore=135.2420;InbreedingCoeff=0.6615;MQ=48.07;MQ0=37;MQRankSum=-0.293;QD=9.91;ReadPosRankSum=-0.365;VQSLOD=2.5729;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:22:5.77:6,0,492	1/1:0,6:6:3.48:154,3,0	0/0:12,0:4:12.03:0,12,126	0/0:11,0:4:12.02:0,12,122	0/0:16,0:16:30.03:0,30,1236	0/0:11,0:10:27.04:0,27,1325	0/0:10,0:7:6.48:0,6,63	0/0:15,0:13:33.89:0,34,264	0/0:8,0:8:21.07:0,21,1141	1/1:15,0:15:29.40:331,29,0	1/1:10,0:9:14.99:146,15,0	0/0:21,0:17:24.50:0,24,792	0/0:8,0:7:18:0,18,854	0/0:11,0:10:26.90:0,27,1454	0/0:8,0:7:14.92:0,15,264	0/0:9,0:8:21.04:0,21,726	1/1:24,1:24:19.16:477,19,0	0/1:31,0:28:15.04:132,0,15	0/0:12,0:11:27.01:0,27,476	0/0:18,0:18:18.87:0,19,406	0/0:26,0:20:38.76:0,39,795	0/0:11,0:11:21.04:0,21,985	0/0:10,0:9:17.97:0,18,530	0/0:23,0:21:44.93:0,45,1388	0/0:18,0:18:27.02:0,27,835	0/0:15,0:14:37.42:0,37,589	0/0:16,0:15:35.98:0,36,618	0/0:3,0:2:3.90:0,4,43
chr10	85979767	.	GA	G	1143.11	PASS	AB=0.888;AC=24;AF=0.429;AN=56;BaseQRankSum=1.986;DP=558;FS=2.052;HRun=14;HaplotypeScore=68.8789;InbreedingCoeff=0.3073;MQ=63.01;MQ0=42;MQRankSum=2.399;QD=3.70;ReadPosRankSum=0.708;VQSLOD=0.6087;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,4:43:12.41:0,12,584	0/1:4,1:5:3.78:15,0,4	0/1:35,0:12:14.67:15,0,63	0/0:24,0:8:14.47:0,14,87	0/1:15,3:17:4.42:4,0,215	0/0:26,1:29:20.35:0,20,327	0/1:16,1:18:0.86:1,0,251	1/1:16,12:26:20.18:216,20,0	0/0:18,0:16:35.72:0,36,297	0/1:19,1:20:36.02:38,0,36	0/1:17,1:19:30.35:31,0,30	0/1:9,3:12:23.21:23,0,73	0/1:15,1:15:2.56:3,0,115	0/0:21,0:20:30.61:0,31,235	0/0:18,0:17:29.98:0,30,262	0/1:9,2:11:21.34:21,0,132	0/0:24,1:26:15.78:0,16,117	0/0:12,0:18:26.56:0,27,140	1/1:9,10:18:3.65:146,4,0	1/1:15,9:24:40.01:263,40,0	1/1:9,5:10:11.39:82,11,0	0/0:14,0:15:7.59:0,8,125	0/0:8,0:8:5.99:0,6,51	0/0:20,0:23:9.99:0,10,300	0/1:8,1:10:6.42:6,0,109	1/1:9,11:22:38.33:227,38,0	1/1:10,10:19:24.87:155,25,0	1/1:2,7:8:11.59:81,12,0
chr10	85980960	.	T	TTTTTTTTTTC	753.66	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.154;DP=473;FS=11.874;HRun=0;HaplotypeScore=137.4108;InbreedingCoeff=0.4363;MQ=60.68;MQ0=10;MQRankSum=-3.243;QD=8.97;ReadPosRankSum=-1.705;VQSLOD=1.5127;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:27:13.94:548,14,0	0/0:9,0:9:23.91:0,24,570	0/0:32,0:10:19.86:0,20,137	0/1:22,0:15:34.16:34,0,58	0/0:17,0:17:38.63:0,39,766	0/0:11,0:11:0.89:0,1,579	1/1:2,6:13:9.02:285,9,0	0/0:29,0:29:62.88:0,63,1170	0/0:8,0:8:9.01:0,9,258	0/0:26,0:26:49.14:0,49,804	0/0:17,0:17:29.64:0,30,484	0/0:14,0:14:36.03:0,36,669	0/0:21,0:19:38.89:0,39,627	0/0:6,0:6:14.07:0,14,271	0/1:9,0:9:7.71:8,0,294	0/0:7,0:7:18.02:0,18,374	0/0:36,0:34:65.56:0,66,1431	0/1:13,0:13:7.43:7,0,156	0/0:31,0:30:17.39:0,17,874	0/0:14,0:14:29.89:0,30,442	0/0:22,0:21:44.32:0,44,1062	0/0:12,0:12:26.99:0,27,476	0/0:4,0:4:12.03:0,12,231	0/0:17,0:17:42.11:0,42,1007	0/0:12,0:12:32.93:0,33,510	0/0:18,0:18:47.99:0,48,919	0/0:14,0:14:31.28:0,31,577	0/0:12,0:12:32.95:0,33,462
chr10	85981009	.	GGCCTTGCGCTTGCTAAGCAAGC	G	831.60	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=1.074;DP=280;FS=0.000;HRun=0;HaplotypeScore=151.7478;InbreedingCoeff=0.6780;MQ=44.72;MQ0=16;MQRankSum=-4.011;QD=92.40;ReadPosRankSum=0.391;VQSLOD=2.9143;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:17.97:0,18,921	0/0:4,0:4:12.01:0,12,498	./.	./.	0/0:14,0:14:14.11:0,14,531	0/0:6,0:6:18.04:0,18,705	0/0:9,0:7:18.06:0,18,1737	0/0:15,0:11:29.97:0,30,809	0/0:12,0:12:30.07:0,30,2152	0/0:15,0:14:36.12:0,36,2265	0/0:7,0:7:12.49:0,12,138	0/0:11,0:11:33.11:0,33,2193	0/0:12,0:11:27.09:0,27,2251	0/0:9,0:9:23.99:0,24,1244	0/0:9,0:8:18.06:0,18,793	0/0:6,0:6:18.06:0,18,1367	0/0:35,0:33:81.02:0,81,4807	1/1:3,6:9:15.05:919,15,0	0/0:12,0:12:33.11:0,33,2020	0/0:7,0:6:12.04:0,12,400	0/0:18,0:17:37.23:0,37,2365	0/0:5,0:5:12.03:0,12,413	0/0:4,0:4:12.04:0,12,703	0/0:9,0:9:24.08:0,24,1241	0/0:4,0:3:6.02:0,6,80	0/0:20,0:18:51.15:0,51,2491	0/0:11,0:11:30.10:0,30,1641	0/0:2,0:2:5.99:0,6,62
chr10	85982142	.	ATCTCTCTCTCTC	A	938.39	PASS	AB=0.893;AC=8;AF=0.182;AN=44;BaseQRankSum=3.385;DP=382;FS=4.565;HRun=0;HaplotypeScore=128.1146;InbreedingCoeff=0.4699;MQ=68.97;MQ0=24;MQRankSum=-0.862;QD=13.60;ReadPosRankSum=-0.260;VQSLOD=2.3577;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:17:24.08:509,24,0	./.	./.	./.	0/0:13,0:14:12.04:0,12,395	0/0:23,0:23:33.11:0,33,1168	./.	0/0:25,0:25:3.48:0,3,51	./.	1/1:5,2:8:12.04:387,12,0	1/1:5,6:13:3.01:97,3,0	0/0:10,0:9:18.06:0,18,705	0/0:10,0:8:14.88:0,15,565	0/0:10,0:10:18.06:0,18,633	0/0:9,0:9:17.37:0,17,671	0/0:9,0:8:6.02:0,6,323	./.	0/1:14,0:13:65.44:65,0,178	0/0:9,0:8:6.02:0,6,233	0/0:6,0:13:12:0,12,248	0/0:13,0:12:8.68:0,9,76	0/0:13,0:12:14.95:0,15,444	0/0:14,0:12:21.07:0,21,998	0/0:16,0:13:17.60:0,18,710	0/0:13,0:13:12.03:0,12,460	0/1:8,0:10:9.91:10,0,94	0/0:17,0:17:17.65:0,18,260	0/0:7,0:7:3.01:0,3,48
chr10	85982185	.	TCACACACACACACACA	T	103.39	PASS	AC=4;AF=0.091;AN=44;BaseQRankSum=2.156;DP=345;FS=2.136;HRun=0;HaplotypeScore=116.1658;InbreedingCoeff=0.3724;MQ=39.83;MQ0=45;MQRankSum=-3.030;QD=3.98;ReadPosRankSum=-0.106;VQSLOD=2.1651;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:21:19.15:0,19,618	./.	./.	./.	0/0:12,0:11:6.02:0,6,302	0/0:20,0:18:18.06:0,18,650	0/0:23,0:18:7.58:0,8,301	0/0:10,0:7:0:0,0,0	0/0:14,0:11:9.03:0,9,583	0/0:13,0:10:0.47:0,0,1	1/1:11,0:10:3.01:67,3,0	0/0:19,0:16:12.04:0,12,541	0/0:11,0:10:18.06:0,18,694	0/0:9,0:9:9.03:0,9,311	0/0:12,0:10:3.01:0,3,191	0/0:12,0:11:12.04:0,12,645	0/0:14,7:17:0.89:0,1,2	0/0:10,0:7:3.01:0,3,118	0/0:7,0:7:3.01:0,3,84	./.	./.	0/0:11,0:9:3.01:0,3,87	0/0:9,0:7:9.03:0,9,304	0/0:27,0:20:18.05:0,18,601	0/0:8,0:7:6.02:0,6,327	0/0:8,0:6:3.01:0,3,136	1/1:15,0:14:3.01:125,3,0	./.
chr10	85982853	.	AT	A	1845.37	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.215;DP=492;FS=4.879;HRun=10;HaplotypeScore=51.6950;InbreedingCoeff=0.9723;MQ=73.93;MQ0=1;MQRankSum=-0.321;QD=20.97;ReadPosRankSum=2.173;VQSLOD=4.7481;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:0,0:22:51.13:0,51,256	1/1:1,8:9:23.98:208,24,0	0/0:19,0:15:14.82:0,15,188	0/0:10,0:8:17.41:0,17,138	0/0:22,0:22:60.10:0,60,622	0/0:22,0:22:57.15:0,57,630	0/0:0,0:9:22.73:0,23,114	0/0:28,0:28:71.97:0,72,749	0/0:9,0:9:24.06:0,24,265	1/1:4,26:30:80.95:697,81,0	1/1:3,16:19:47.99:417,48,0	0/0:11,0:11:30.06:0,30,322	0/0:9,0:10:29.90:0,30,304	0/0:14,0:14:42.10:0,42,452	0/0:15,0:15:36.08:0,36,389	0/0:12,0:12:27.07:0,27,299	1/1:1,11:12:26.99:234,27,0	1/1:0,18:18:53.97:464,54,0	0/0:17,1:18:12.88:0,13,353	0/0:30,0:30:84.06:0,84,887	0/0:18,0:18:53.33:0,53,555	0/0:18,0:18:48.13:0,48,531	0/0:10,0:10:27.06:0,27,290	0/0:14,0:14:42.09:0,42,455	0/0:29,0:29:84.17:0,84,890	0/0:25,1:26:43.13:0,43,697	0/0:35,0:33:93.24:0,93,1020	0/0:3,0:3:9.02:0,9,100
chr10	85985136	.	AG	A	2328.11	PASS	AB=0.966;AC=11;AF=0.196;AN=56;BaseQRankSum=6.545;DP=596;FS=1.427;HRun=4;HaplotypeScore=68.6125;InbreedingCoeff=0.8271;MQ=67.41;MQ0=15;MQRankSum=0.060;QD=18.93;ReadPosRankSum=1.624;VQSLOD=3.1299;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,1:28:34.07:34,0,127	1/1:1,14:15:36.11:430,36,0	0/0:53,0:19:3.47:0,3,220	0/0:36,0:16:12.77:0,13,107	0/0:32,0:32:67.91:0,68,998	0/0:25,0:25:67.02:0,67,818	0/0:18,0:18:12.48:0,12,72	0/0:32,0:32:88.45:0,88,1079	0/0:9,0:9:24.07:0,24,307	1/1:2,18:20:60.15:691,60,0	1/1:6,13:19:45.10:512,45,0	0/0:13,1:14:8.05:0,8,463	0/0:10,0:10:30.06:0,30,379	0/0:14,0:14:42.14:0,42,571	0/0:23,0:23:63.14:0,63,820	0/0:17,0:17:29.26:0,29,609	1/1:2,27:29:63.16:728,63,0	1/1:12,0:12:18.38:110,18,0	0/0:24,0:24:65.11:0,65,758	0/0:20,1:20:54.63:0,55,729	0/0:19,0:19:49.86:0,50,640	0/0:17,0:17:48.96:0,49,624	0/0:21,0:21:57.17:0,57,769	0/0:21,0:21:60.15:0,60,760	0/0:15,0:15:45.10:0,45,566	0/0:24,0:24:33.13:0,33,778	0/0:22,0:22:60.11:0,60,735	0/0:6,0:6:18.06:0,18,251
chr10	85985139	.	G	GA	105.46	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.492;DP=602;FS=1.230;HRun=0;HaplotypeScore=78.6719;InbreedingCoeff=0.9663;MQ=68.80;MQ0=15;MQRankSum=-0.199;QD=8.11;ReadPosRankSum=-0.275;VQSLOD=3.5448;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:40.51:0,41,401	0/0:15,0:15:31.45:0,31,122	0/0:54,0:20:32.09:0,32,288	0/0:34,0:14:17.45:0,17,145	0/0:32,0:32:91.15:0,91,1204	0/0:25,0:25:69.21:0,69,926	0/0:18,0:18:47.79:0,48,265	0/0:33,0:33:90.29:0,90,1223	0/0:8,0:8:24.04:0,24,311	0/0:19,0:21:48.72:0,49,174	0/0:17,0:18:28.88:0,29,105	0/0:15,0:15:44.69:0,45,552	0/0:10,0:10:30.10:0,30,416	0/0:15,0:15:45.10:0,45,592	0/0:21,0:21:63.21:0,63,874	0/0:17,0:17:48.15:0,48,653	0/0:27,0:28:47.76:0,48,162	1/1:3,10:13:15.97:195,16,0	0/0:24,0:24:68.69:0,69,862	0/0:22,0:21:63.19:0,63,843	0/0:21,0:21:60.05:0,60,756	0/0:18,0:18:51.11:0,51,673	0/0:21,0:21:60.19:0,60,815	0/0:21,0:21:60.10:0,60,792	0/0:15,0:15:45.14:0,45,611	0/0:25,0:25:71.57:0,72,928	0/0:22,0:22:63.18:0,63,828	0/0:7,0:7:18.06:0,18,252
chr10	85985140	.	GA	G	420.50	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=10.034;DP=607;FS=2.751;HRun=11;HaplotypeScore=75.3695;InbreedingCoeff=0.8853;MQ=70.12;MQ0=15;MQRankSum=-0.133;QD=5.07;ReadPosRankSum=2.985;VQSLOD=1.5861;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:68.87:0,69,749	1/1:15,0:15:16.72:98,17,0	0/0:52,0:21:34.45:0,34,265	0/0:34,0:15:13.14:0,13,96	0/0:28,3:31:36.64:0,37,658	0/0:22,2:24:32.50:0,33,551	0/0:19,0:19:54.08:0,54,552	0/0:32,0:32:50.50:0,50,720	0/0:7,0:8:20.89:0,21,206	1/1:21,0:21:32.44:168,32,0	0/1:18,0:18:2.56:110,0,3	0/0:17,0:17:30.26:0,30,463	0/0:10,0:10:24.06:0,24,256	0/0:14,0:15:44.91:0,45,445	0/0:21,0:21:54.11:0,54,561	0/0:17,0:17:48.58:0,49,507	1/1:29,0:29:40.92:193,41,0	0/0:14,0:14:25.48:0,25,130	0/0:24,0:24:62.81:0,63,609	0/0:21,1:21:35.45:0,35,563	0/0:19,1:21:29.36:0,29,487	0/0:18,0:18:44.78:0,45,453	0/0:20,1:21:35.41:0,35,567	0/0:19,0:21:50.78:0,51,495	0/0:15,0:15:39.10:0,39,416	0/0:23,0:25:42.31:0,42,560	0/0:22,0:23:53.93:0,54,535	0/0:7,0:7:21.04:0,21,216
chr10	85985394	.	TCTCCCTCC	T	3713.92	PASS	AB=0.944;AC=9;AF=0.161;AN=56;BaseQRankSum=10.184;DP=474;FS=1.210;HRun=0;HaplotypeScore=119.4869;InbreedingCoeff=0.8019;MQ=68.89;MQ0=0;MQRankSum=-9.932;QD=39.93;ReadPosRankSum=-0.177;VQSLOD=3.1109;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:54.19:0,54,1993	1/1:1,5:6:12.04:320,12,0	0/0:26,0:22:33.47:0,33,729	0/0:19,0:14:13:0,13,1030	0/0:23,0:23:60.21:0,60,2413	0/0:24,0:24:60.19:0,60,2227	0/0:19,0:19:54.19:0,54,2215	0/0:25,0:25:39.13:0,39,1333	0/0:12,0:11:24.08:0,24,966	1/1:6,20:26:54.14:1371,54,0	1/1:4,25:29:66.18:1658,66,0	0/0:17,0:17:48.16:0,48,1816	0/0:15,0:15:39.09:0,39,1543	0/0:16,0:16:36.12:0,36,1492	0/0:18,0:18:48.15:0,48,1866	0/0:16,0:16:42.14:0,42,1794	1/1:1,14:15:12.04:320,12,0	0/0:8,0:8:18.04:0,18,635	0/0:13,0:13:36.11:0,36,1316	0/0:18,0:18:39.13:0,39,1572	0/0:11,0:11:30.10:0,30,1112	0/0:11,0:11:33.10:0,33,1282	0/0:15,0:15:45.15:0,45,1877	0/0:15,0:15:36.11:0,36,1304	0/0:9,0:9:18.06:0,18,662	0/1:16,1:17:44:44,0,1261	0/0:20,0:20:51.16:0,51,1902	0/0:7,0:7:3.01:0,3,128
chr10	85985602	.	GGGAGTGTTTTGTACTCGAGCA	G	5299.12	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.431;DP=600;FS=4.420;HRun=0;HaplotypeScore=316.9132;InbreedingCoeff=0.9599;MQ=82.70;MQ0=0;MQRankSum=-8.131;QD=98.13;ReadPosRankSum=2.949;VQSLOD=3.7375;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.22:0,63,5856	1/1:0,6:6:12.04:699,12,0	0/0:25,0:25:60.14:0,60,3632	0/0:21,0:21:57.02:0,57,3322	0/0:21,0:21:60.21:0,60,5370	0/0:27,0:27:78.27:0,78,7556	0/0:34,0:34:96.28:0,96,8097	0/0:28,0:28:75.25:0,75,5329	0/0:25,0:25:75.26:0,75,7119	1/1:9,14:23:45.13:2331,45,0	1/1:3,11:14:33.11:1920,33,0	0/0:25,0:25:75.26:0,75,6851	0/0:21,0:21:60.17:0,60,5143	0/0:16,0:16:48.16:0,48,4066	0/0:23,0:23:66.23:0,66,6316	0/0:18,0:18:51.13:0,51,4238	1/1:4,7:11:6.02:349,6,0	0/0:25,0:25:66.20:0,66,5480	0/0:14,0:14:39.13:0,39,2984	0/0:12,0:12:36.12:0,36,3478	0/0:50,0:50:99:0,135,11321	0/0:19,0:19:54.19:0,54,5184	0/0:21,0:21:57.20:0,57,4879	0/0:18,0:18:51.17:0,51,4401	0/0:24,0:24:66.23:0,66,5990	0/0:24,0:24:63.22:0,63,5842	0/0:25,0:25:69.24:0,69,6830	0/0:7,0:7:21.07:0,21,1792
chr10	85986191	.	T	TA	2936.73	PASS	AB=0.735;AC=22;AF=0.440;AN=50;BaseQRankSum=5.606;DP=180;FS=4.836;HRun=3;HaplotypeScore=31.9519;InbreedingCoeff=0.3037;MQ=46.83;MQ0=4;MQRankSum=-4.589;QD=23.88;ReadPosRankSum=-0.919;VQSLOD=2.4261;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:28.63:143,29,0	0/0:1,0:4:0.04:0,0,65	./.	0/0:6,0:2:2.43:0,2,24	0/0:5,0:5:12.04:0,12,148	0/0:12,0:12:36.06:0,36,416	1/1:1,0:1:2.80:13,3,0	1/1:10,33:42:99:1533,114,0	0/0:6,0:6:15.03:0,15,173	0/1:1,0:4:28.81:42,0,29	0/1:2,2:4:54.05:54,0,62	0/0:2,0:2:6.02:0,6,74	0/0:6,0:6:18.06:0,18,223	0/0:2,0:2:3.01:0,3,37	0/0:2,0:2:6:0,6,61	./.	0/1:8,2:11:41.41:41,0,171	0/1:8,5:13:99:181,0,171	1/1:1,6:7:21.04:250,21,0	1/1:1,2:3:6.02:71,6,0	0/1:3,0:3:23.95:34,0,24	./.	0/0:2,0:2:6.02:0,6,74	0/1:1,1:2:31.14:35,0,31	0/0:9,0:9:27.08:0,27,335	1/1:1,2:3:6.02:79,6,0	1/1:2,8:10:30.08:376,30,0	1/1:2,4:6:18.06:255,18,0
chr10	85986968	.	AAAAT	A	743.15	PASS	AC=16;AF=0.348;AN=46;BaseQRankSum=2.672;DP=265;FS=0.000;HRun=0;HaplotypeScore=43.5421;InbreedingCoeff=0.5941;MQ=57.70;MQ0=5;MQRankSum=-0.124;QD=10.47;ReadPosRankSum=1.845;VQSLOD=1.5568;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:16:9.01:84,9,0	1/1:3,2:5:6.02:92,6,0	./.	./.	0/0:11,0:11:9.03:0,9,172	0/0:11,0:10:12.04:0,12,275	./.	./.	0/0:4,0:4:3.01:0,3,70	1/1:3,2:5:6.02:80,6,0	1/1:7,2:8:3.01:46,3,0	0/0:2,0:5:6.02:0,6,105	0/0:8,0:9:3.01:0,3,52	0/0:8,0:10:6.02:0,6,105	0/0:9,0:9:6.02:0,6,140	0/0:7,0:7:6.02:0,6,140	1/1:10,8:17:21.07:321,21,0	0/0:18,0:18:17.95:0,18,192	0/0:17,0:14:12.02:0,12,218	0/0:14,0:13:6.02:0,6,140	1/1:3,3:6:6.02:92,6,0	./.	0/0:5,0:5:3.01:0,3,70	0/0:3,0:3:3.01:0,3,70	0/0:9,0:9:9.03:0,9,194	1/1:7,1:8:3.01:46,3,0	0/0:12,0:12:5.91:0,6,86	1/1:1,3:4:9.03:137,9,0
chr10	85987676	.	C	CG	1167.75	PASS	AB=0.919;AC=9;AF=0.167;AN=54;BaseQRankSum=8.254;DP=406;FS=16.596;HRun=4;HaplotypeScore=51.5879;InbreedingCoeff=0.8271;MQ=68.05;MQ0=7;MQRankSum=-6.968;QD=14.78;ReadPosRankSum=0.344;VQSLOD=1.7420;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:31,3:32:29.58:30,0,661	./.	0/0:15,0:14:24.02:0,24,258	0/0:5,0:4:8.96:0,9,85	0/0:19,0:19:42.12:0,42,476	0/0:23,0:22:57.16:0,57,646	0/0:11,0:11:27.08:0,27,306	0/0:21,0:20:45.12:0,45,509	0/0:14,0:14:39.11:0,39,442	1/1:2,9:11:27.09:367,27,0	1/1:2,3:5:9.03:123,9,0	0/0:14,0:14:36.10:0,36,408	0/0:6,0:6:18.05:0,18,204	0/0:13,0:12:33.09:0,33,374	0/0:17,0:17:48.14:0,48,544	0/0:17,0:17:48.14:0,48,544	1/1:2,20:20:48.13:632,48,0	1/1:3,4:7:14.72:175,15,0	0/0:14,0:12:33.09:0,33,374	0/0:13,0:13:36.10:0,36,408	0/0:14,0:14:42.12:0,42,476	0/0:10,0:10:30.09:0,30,339	0/0:13,0:12:36.10:0,36,408	0/0:23,0:23:60.14:0,60,667	0/0:6,0:6:18.05:0,18,204	0/0:22,0:22:63.17:0,63,705	0/0:21,0:21:54.15:0,54,612	0/0:15,0:15:42.12:0,42,476
chr10	85987701	.	T	TTA	542.37	PASS	AB=0.600;AC=9;AF=0.167;AN=54;BaseQRankSum=6.406;DP=329;FS=15.863;HRun=0;HaplotypeScore=45.9885;InbreedingCoeff=0.7009;MQ=50.74;MQ0=18;MQRankSum=-5.581;QD=24.65;ReadPosRankSum=-2.426;VQSLOD=1.7345;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:63.22:0,63,1027	./.	1/1:4,0:3:0.47:1,0,0	0/0:2,0:1:3.01:0,3,49	0/0:14,0:14:30.09:0,30,459	0/0:18,0:17:48.16:0,48,766	0/0:11,0:9:24.55:0,25,390	0/0:15,0:11:33.07:0,33,506	0/0:16,0:16:39.13:0,39,626	1/1:1,3:3:9.03:183,9,0	1/1:0,2:2:6.02:73,6,0	0/0:13,0:13:33.11:0,33,519	0/0:8,0:8:24.08:0,24,391	0/0:14,0:13:33.11:0,33,538	0/0:14,0:14:39.13:0,39,636	0/0:19,0:17:45.14:0,45,706	1/1:2,7:7:21.07:311,21,0	0/1:1,2:3:39.85:109,0,40	0/0:15,0:10:30.09:0,30,458	0/0:10,0:10:24.07:0,24,367	0/0:12,0:11:33.11:0,33,538	0/0:4,0:4:12.04:0,12,196	0/0:13,0:12:33.09:0,33,490	0/0:21,0:21:57.19:0,57,929	0/0:7,0:7:18.06:0,18,282	0/0:18,0:18:54.18:0,54,881	0/0:22,0:22:57.19:0,57,917	0/0:15,0:15:42.14:0,42,667
chr10	85987772	.	A	AATAAATAAATAAATAAAT	1617.48	PASS	AB=1.000;AC=10;AF=0.192;AN=52;BaseQRankSum=2.521;DP=328;FS=24.044;HRun=0;HaplotypeScore=170.5200;InbreedingCoeff=0.3556;MQ=63.41;MQ0=22;MQRankSum=-3.898;QD=17.58;ReadPosRankSum=4.170;VQSLOD=0.8313;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,6:16:15.05:1089,15,0	./.	0/0:36,0:15:29.15:0,29,345	0/0:15,0:8:18.23:0,18,155	0/0:19,0:19:57.05:0,57,1149	0/0:12,0:12:30.07:0,30,925	1/1:5,0:3:9.03:436,9,0	0/1:15,0:9:35.73:36,0,206	0/0:14,0:13:27.09:0,27,606	./.	0/0:1,0:1:3.01:0,3,41	0/0:12,0:12:14.28:0,14,181	0/0:16,0:16:42.13:0,42,878	0/0:8,0:8:21.07:0,21,481	0/0:14,0:13:33.11:0,33,887	0/0:13,0:10:30.10:0,30,1129	0/0:2,0:2:2.07:0,2,8	0/0:2,0:2:5.94:0,6,41	0/1:16,0:15:31.08:31,0,304	0/0:10,0:10:19.12:0,19,267	1/1:1,0:1:2.96:19,3,0	0/0:7,0:7:18.06:0,18,541	0/0:6,0:6:15.05:0,15,500	0/0:17,0:17:38.71:0,39,860	0/0:12,0:12:33.09:0,33,985	0/1:22,0:19:99:111,0,402	0/1:15,0:13:39.84:40,0,58	0/0:18,0:14:34.17:0,34,332
chr10	85987971	.	T	TA	1722.21	PASS	AB=0.788;AC=15;AF=0.268;AN=56;BaseQRankSum=-4.902;DP=424;FS=7.217;HRun=13;HaplotypeScore=51.5352;InbreedingCoeff=0.5044;MQ=58.49;MQ0=4;MQRankSum=0.952;QD=10.13;ReadPosRankSum=1.663;VQSLOD=2.5593;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,15:23:35.71:306,36,0	0/1:2,4:6:8.57:72,0,9	0/0:6,0:3:4.95:0,5,23	0/0:6,0:5:1.20:0,1,3	0/1:13,2:15:27.89:28,0,117	0/0:16,2:19:12.74:0,13,218	0/1:5,9:14:6.41:119,0,6	0/0:38,0:37:74:0,74,497	0/0:12,0:13:30.81:0,31,197	1/1:5,20:25:15.82:413,16,0	1/1:3,22:27:52:437,52,0	0/1:9,1:10:15.96:16,0,50	0/0:9,0:9:17.79:0,18,121	0/0:11,0:12:25.78:0,26,169	0/0:22,0:23:43.47:0,43,290	0/0:8,0:8:17.81:0,18,123	1/1:5,16:20:6.89:349,7,0	1/1:1,0:16:26.81:155,27,0	0/0:11,0:11:16.83:0,17,107	0/1:11,1:12:4.12:4,0,118	0/0:9,0:9:20.69:0,21,138	0/0:1,0:1:2.98:0,3,21	0/0:8,0:8:17.85:0,18,123	0/0:6,0:5:11.87:0,12,82	0/0:21,0:22:48.91:0,49,312	0/0:21,0:23:46.56:0,47,310	0/0:16,1:17:10.73:0,11,214	0/0:20,0:20:29.67:0,30,205
chr10	85988146	.	AC	A	2851.88	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.218;DP=497;FS=6.473;HRun=1;HaplotypeScore=47.7359;InbreedingCoeff=0.9581;MQ=56.96;MQ0=7;MQRankSum=1.621;QD=36.10;ReadPosRankSum=0.169;VQSLOD=3.3159;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.25:0,78,1223	1/1:0,5:5:12.04:168,12,0	0/0:25,0:7:15.05:0,15,223	0/0:18,0:11:29.98:0,30,419	0/0:12,0:12:30.10:0,30,479	0/0:12,0:12:33.07:0,33,478	0/0:17,0:17:51.16:0,51,773	0/0:37,0:37:99:0,111,1723	0/0:22,0:22:63.21:0,63,1003	1/1:0,19:19:54.17:738,54,0	1/1:0,9:9:21.07:293,21,0	0/0:13,0:13:36.11:0,36,545	0/0:17,0:17:51.16:0,51,791	0/0:22,0:22:63.21:0,63,1005	0/0:17,0:17:51.17:0,51,815	0/0:10,0:10:30.10:0,30,480	1/1:0,19:19:57.19:797,57,0	1/1:2,25:27:37.49:1029,37,0	0/0:19,0:19:54.18:0,54,864	0/0:18,0:18:51.16:0,51,791	0/0:16,0:16:48.16:0,48,758	0/0:2,0:2:6.02:0,6,96	0/0:6,0:6:18.06:0,18,288	0/0:36,0:36:99:0,105,1642	0/0:15,0:15:39.13:0,39,623	0/0:19,1:20:15.20:0,15,768	0/0:12,0:12:24.08:0,24,383	0/0:25,0:24:69.24:0,69,1101
chr10	85990712	.	GA	G	1725.15	PASS	AB=0.900;AC=11;AF=0.196;AN=56;BaseQRankSum=10.655;DP=604;FS=8.762;HRun=11;HaplotypeScore=73.7330;InbreedingCoeff=0.8626;MQ=70.58;MQ0=0;MQRankSum=-0.932;QD=13.80;ReadPosRankSum=1.872;VQSLOD=3.5419;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,2:48:99:0,101,1224	1/1:0,9:9:26.97:221,27,0	0/0:34,1:28:1.60:0,2,402	0/0:22,0:18:21.98:0,22,188	0/0:27,0:27:61.02:0,61,625	0/0:15,0:15:33.06:0,33,341	0/0:26,0:26:60.13:0,60,621	0/0:19,0:19:42.08:0,42,425	0/0:16,1:17:17.46:0,17,374	1/1:4,16:20:47.93:393,48,0	1/1:3,14:17:33.42:272,33,0	0/0:24,0:24:45.38:0,45,625	0/0:13,1:14:14.41:0,14,344	0/0:24,0:24:45.02:0,45,440	0/0:20,0:20:42.10:0,42,443	0/0:21,0:21:54.12:0,54,560	1/1:2,27:29:74.91:615,75,0	1/1:4,19:23:47.94:394,48,0	0/1:24,3:27:4.73:5,0,542	0/0:27,0:28:77.33:0,77,760	0/0:31,0:32:68.65:0,69,882	0/0:12,0:12:33.08:0,33,348	0/0:11,0:11:24.09:0,24,297	0/0:25,0:26:65.22:0,65,689	0/0:12,0:13:32.90:0,33,324	0/0:12,0:12:30.08:0,30,318	0/0:23,1:24:38.45:0,38,565	0/0:8,0:8:20.95:0,21,186
chr10	85991551	.	GA	G	802.79	PASS	AB=0.862;AC=17;AF=0.304;AN=56;BaseQRankSum=9.090;DP=437;FS=1.122;HRun=12;HaplotypeScore=66.2194;InbreedingCoeff=0.1989;MQ=59.75;MQ0=11;MQRankSum=1.669;QD=4.61;ReadPosRankSum=2.060;VQSLOD=1.2603;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:47.11:0,47,490	1/1:1,4:5:8.95:70,9,0	0/1:10,1:8:8.17:22,0,8	0/1:3,1:4:9.13:9,0,21	0/0:15,1:16:15.82:0,16,331	0/1:12,3:16:34.48:34,0,260	0/0:20,0:19:53.86:0,54,509	0/0:20,2:24:0.70:0,1,388	0/0:16,1:17:0.80:0,1,184	1/1:4,9:11:23.89:185,24,0	1/1:5,10:16:1.44:183,1,0	0/1:6,1:7:2.19:2,0,161	0/0:10,0:9:15.03:0,15,152	0/0:12,0:12:27.03:0,27,263	0/0:13,1:12:17.83:0,18,178	0/0:18,0:18:39.08:0,39,396	1/1:5,20:25:52.83:416,53,0	0/1:12,3:15:13.42:13,0,234	0/0:24,2:22:9.49:0,9,394	0/0:11,0:10:18.03:0,18,178	0/0:21,1:22:22.30:0,22,398	0/0:11,0:12:17.83:0,18,156	0/0:7,0:7:15.03:0,15,152	0/0:22,1:27:50.17:0,50,505	0/1:12,1:14:5.39:5,0,107	0/1:15,2:17:8.69:9,0,211	0/1:19,3:21:4.40:4,0,320	0/1:6,1:7:11.21:11,0,79
chr10	85993004	.	A	AAAAC	4265.92	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=2.892;DP=371;FS=11.319;HRun=0;HaplotypeScore=82.2452;InbreedingCoeff=0.9653;MQ=81.87;MQ0=2;MQRankSum=-7.494;QD=52.02;ReadPosRankSum=-2.101;VQSLOD=4.8304;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,5:18:41.78:858,42,0	1/1:1,1:2:6.02:131,6,0	0/0:22,0:18:32.98:0,33,533	0/0:13,0:9:19.87:0,20,312	0/0:12,0:12:33.11:0,33,618	0/0:16,0:16:45.14:0,45,811	1/1:5,7:12:30.08:687,30,0	0/0:31,0:31:69.24:0,69,1276	0/0:14,0:14:36.11:0,36,641	1/1:4,9:15:39.09:801,39,0	1/1:5,6:11:21.65:565,22,0	0/0:12,0:12:36.11:0,36,637	0/0:10,0:10:24.08:0,24,425	0/0:6,0:6:18.03:0,18,246	0/0:11,0:11:33.10:0,33,559	0/0:14,0:14:35.96:0,36,568	1/1:6,7:13:29.07:595,29,0	1/1:2,9:11:24.08:629,24,0	0/0:20,0:20:54.65:0,55,982	0/0:20,0:20:54.16:0,54,948	0/0:12,0:12:33.10:0,33,586	0/0:12,0:12:36.12:0,36,653	0/0:8,0:8:24.07:0,24,418	0/0:12,0:12:33.11:0,33,617	0/0:4,0:4:9.03:0,9,168	0/0:14,0:14:33.09:0,33,558	0/0:17,0:17:48.14:0,48,805	0/0:9,0:9:27.09:0,27,506
chr10	85993143	.	C	CTAAA	885.68	PASS	AC=12;AF=0.300;AN=40;BaseQRankSum=-4.419;DP=226;FS=11.630;HRun=0;HaplotypeScore=39.9768;InbreedingCoeff=0.5716;MQ=60.07;MQ0=1;MQRankSum=1.341;QD=12.47;ReadPosRankSum=-2.548;VQSLOD=0.8148;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:3,0:5:6.01:0,6,56	./.	./.	0/0:8,0:8:12.04:0,12,184	0/0:10,0:10:12.03:0,12,163	./.	1/1:30,0:30:2.98:21,3,0	0/0:5,0:5:6.02:0,6,87	0/0:6,0:7:3:0,3,28	0/0:6,0:9:3:0,3,28	0/0:8,0:8:3.01:0,3,46	0/0:5,0:5:3.01:0,3,46	0/0:3,0:3:6.02:0,6,92	0/0:9,0:9:6.02:0,6,90	./.	0/0:10,0:11:3:0,3,28	0/0:7,0:15:23.68:0,24,219	1/1:14,2:17:9.03:206,9,0	./.	1/1:2,2:4:6.02:140,6,0	./.	./.	0/0:7,0:7:6.02:0,6,92	0/0:15,0:15:9.02:0,9,117	1/1:5,2:8:9.02:166,9,0	1/1:2,3:5:6.02:140,6,0	1/1:2,5:7:15.05:350,15,0
chr10	85993417	.	C	CAATATA	722.07	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=4.187;DP=330;FS=3.282;HRun=0;HaplotypeScore=73.3689;InbreedingCoeff=0.8686;MQ=84.47;MQ0=0;MQRankSum=-5.583;QD=34.38;ReadPosRankSum=-1.830;VQSLOD=2.9897;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.20:0,66,1555	./.	0/0:17,0:16:28.53:0,29,478	0/0:12,0:12:23.74:0,24,273	0/0:13,0:12:39.09:0,39,819	0/0:18,0:18:54.10:0,54,1268	0/0:11,0:11:33.10:0,33,766	0/0:40,0:39:99:0,117,2248	0/0:7,0:7:21.07:0,21,474	1/1:3,0:3:8.98:78,9,0	./.	0/0:12,0:12:36.10:0,36,789	0/0:11,0:11:33.07:0,33,688	0/0:8,0:8:24.07:0,24,534	0/0:17,0:17:51.13:0,51,1099	0/0:18,0:18:54.12:0,54,1100	1/1:11,0:11:32.69:364,33,0	1/1:2,4:7:12.04:412,12,0	0/0:19,0:19:57.18:0,57,1338	0/0:11,0:11:33.11:0,33,781	0/0:3,0:3:9.01:0,9,177	0/0:1,0:1:3.01:0,3,77	0/0:5,0:5:15.05:0,15,356	0/0:5,0:5:12.02:0,12,254	0/0:8,0:8:24.07:0,24,530	0/0:19,0:19:57.16:0,57,1187	0/0:19,0:19:57.15:0,57,1336	0/0:8,0:8:21.07:0,21,463
chr10	85995787	.	TA	T	4040.92	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.471;DP=620;FS=0.000;HRun=2;HaplotypeScore=63.1661;InbreedingCoeff=0.9760;MQ=76.86;MQ0=0;MQRankSum=-2.374;QD=35.14;ReadPosRankSum=2.228;VQSLOD=4.0537;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.17:0,57,799	1/1:0,8:8:18.02:214,18,0	0/0:16,0:15:7.78:0,8,392	0/0:16,0:16:40.72:0,41,431	0/0:37,0:37:99:0,111,1543	0/0:31,0:31:90.29:0,90,1275	0/0:15,0:15:45.10:0,45,574	0/0:34,0:34:99:0,102,1407	0/0:23,0:23:69.18:0,69,921	1/1:1,30:31:93.23:1147,93,0	1/1:0,32:32:96.23:1205,96,0	0/0:23,0:23:69.21:0,69,959	0/0:11,0:11:27.09:0,27,388	0/0:17,0:17:51.14:0,51,668	0/0:22,0:22:63.17:0,63,853	0/0:23,0:23:69.22:0,69,976	1/1:1,36:37:93.30:1203,93,0	1/1:0,7:7:21.07:272,21,0	0/0:10,0:10:30.10:0,30,432	0/0:29,0:29:87.21:0,87,1141	0/0:14,0:14:42.12:0,42,569	0/0:29,0:29:87.29:0,87,1249	0/0:26,0:26:78.08:0,78,989	0/0:21,0:21:63.21:0,63,906	0/0:16,0:16:48.14:0,48,645	0/0:26,1:27:39.37:0,39,942	0/0:36,0:36:99:0,105,1395	0/0:8,0:8:15.05:0,15,215
chr10	85996293	.	TGTG	T	781.19	PASS	AB=0.948;AC=12;AF=0.214;AN=56;BaseQRankSum=9.667;DP=421;FS=25.084;HRun=0;HaplotypeScore=89.2636;InbreedingCoeff=0.2060;MQ=65.82;MQ0=6;MQRankSum=-1.325;QD=4.46;ReadPosRankSum=6.955;VQSLOD=0.0269;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:44.27:113,0,44	1/1:11,0:11:1.86:92,2,0	0/0:33,0:17:15.89:0,16,292	0/0:25,0:15:14.75:0,15,272	0/0:8,0:8:5.99:0,6,48	0/0:9,0:9:12.88:0,13,122	1/1:12,0:11:19.94:117,20,0	0/0:13,0:12:15.84:0,16,212	0/0:10,0:10:6.02:0,6,132	0/1:31,0:31:60.28:230,0,60	1/1:29,0:29:6.55:178,7,0	0/0:12,0:12:21.47:0,21,186	0/0:11,0:11:8.97:0,9,72	0/0:5,0:5:3.01:0,3,66	0/0:5,0:5:6.01:0,6,90	0/0:4,0:4:9:0,9,81	0/1:18,0:17:62.21:62,0,62	0/1:6,5:10:24.09:123,0,24	0/0:12,0:12:29.92:0,30,303	0/0:17,0:17:45.01:0,45,501	0/0:23,0:23:60.39:0,60,593	0/0:11,0:11:8.98:0,9,74	0/1:20,0:20:8.16:8,0,81	0/1:13,0:13:8.12:8,0,136	0/0:11,0:10:30.02:0,30,325	0/0:16,0:15:36.01:0,36,344	0/0:14,0:14:39.07:0,39,511	0/0:7,0:7:17.99:0,18,219
chr10	85996295	.	TGGG	T	2616.28	PASS	AB=0.958;AC=15;AF=0.278;AN=54;BaseQRankSum=6.207;DP=395;FS=4.365;HRun=12;HaplotypeScore=80.1193;InbreedingCoeff=0.5905;MQ=66.27;MQ0=6;MQRankSum=-1.614;QD=13.99;ReadPosRankSum=5.297;VQSLOD=1.6120;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,22:28:29.55:378,30,0	1/1:1,10:11:24:303,24,0	0/1:32,0:16:20.17:20,0,191	0/0:23,0:15:17.64:0,18,193	0/0:4,0:4:3:0,3,26	0/0:8,0:8:9.88:0,10,102	1/1:1,11:11:21.05:265,21,0	0/1:12,0:13:25.66:26,0,93	0/0:9,0:9:18.05:0,18,289	1/1:6,24:31:74.61:920,75,0	1/1:1,27:28:44.90:568,45,0	0/0:10,0:10:21.42:0,21,171	0/0:5,0:5:2.99:0,3,23	0/0:6,0:7:15.03:0,15,209	0/0:7,0:7:15.02:0,15,189	0/0:6,0:6:15:0,15,153	1/1:7,11:17:20.10:264,20,0	0/1:12,0:11:54.74:56,0,55	0/0:10,0:11:7.61:0,8,100	0/0:16,0:18:31.91:0,32,361	0/0:22,0:24:27.80:0,28,295	./.	0/0:12,0:14:2.84:0,3,27	0/0:11,0:12:22.30:0,22,316	0/0:11,0:10:12.04:0,12,175	0/0:14,0:13:5.89:0,6,57	0/0:12,0:13:32.29:0,32,443	0/0:6,0:6:12.04:0,12,178
chr10	85996843	.	TG	T	2965.62	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.706;DP=682;FS=4.308;HRun=5;HaplotypeScore=88.5883;InbreedingCoeff=0.9958;MQ=86.77;MQ0=2;MQRankSum=-7.147;QD=27.98;ReadPosRankSum=1.238;VQSLOD=3.8002;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,1573	1/1:1,7:8:24.06:264,24,0	0/0:43,0:36:87.44:0,87,926	0/0:47,0:35:61.31:0,61,661	0/0:34,0:34:99:0,99,1277	0/0:22,0:22:63.18:0,63,824	0/0:26,0:26:69.14:0,69,869	0/0:29,0:29:81.26:0,81,1093	0/0:9,0:9:21.07:0,21,287	1/1:6,27:33:87.22:966,87,0	1/1:2,22:25:75.05:800,75,0	0/0:17,0:17:51.16:0,51,681	0/0:13,0:13:39.13:0,39,533	0/0:19,0:19:57.17:0,57,762	0/0:33,0:33:96.25:0,96,1243	0/0:17,0:17:45.15:0,45,615	1/1:8,15:23:53.93:533,54,0	1/1:0,17:17:51.15:578,51,0	0/0:28,0:28:78.22:0,78,1019	0/0:23,0:23:60.19:0,60,803	0/0:34,0:34:90.26:0,90,1193	0/0:15,0:15:45.09:0,45,576	0/0:21,0:21:57.19:0,57,779	0/0:21,0:21:60.18:0,60,802	0/0:20,0:20:57.14:0,57,714	0/0:28,1:29:21.15:0,21,929	0/0:25,0:25:75.22:0,75,995	0/0:6,0:6:18.04:0,18,229
chr10	85996863	.	AT	A	1512.75	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.118;DP=640;FS=1.990;HRun=12;HaplotypeScore=88.4731;InbreedingCoeff=0.9153;MQ=76.50;MQ0=4;MQRankSum=-5.978;QD=17.19;ReadPosRankSum=-1.410;VQSLOD=3.9949;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,111,1093	1/1:2,8:10:23.84:179,24,0	0/0:36,1:27:23.69:0,24,190	0/0:43,0:26:12.01:0,12,199	0/0:31,0:32:80.94:0,81,781	0/0:18,0:18:48.08:0,48,480	0/0:26,0:26:48.89:0,49,650	0/0:25,2:26:13.60:0,14,483	0/0:10,1:11:3.80:0,4,214	1/1:3,28:31:86.65:670,87,0	1/1:5,25:30:71.57:544,72,0	0/0:16,0:16:45.08:0,45,450	0/0:16,0:16:48.08:0,48,476	0/0:19,0:20:30.25:0,30,443	0/0:23,0:23:60.10:0,60,597	0/0:13,0:13:39.08:0,39,396	1/1:1,15:17:37.82:279,38,0	0/0:23,0:23:57.04:0,57,559	0/0:20,0:20:42.08:0,42,423	0/0:24,1:25:48.89:0,49,666	0/0:24,0:24:45.09:0,45,457	0/0:17,0:17:51.03:0,51,491	0/0:21,0:21:50.12:0,50,488	0/0:18,0:18:48.08:0,48,478	0/0:16,1:17:12.74:0,13,297	0/0:21,2:23:7.66:0,8,427	0/0:31,0:31:63.88:0,64,815	0/0:6,0:6:17.99:0,18,167
chr10	85998144	.	G	GA	836.80	PASS	AB=0.962;AC=11;AF=0.196;AN=56;BaseQRankSum=4.819;DP=502;FS=10.830;HRun=11;HaplotypeScore=73.1237;InbreedingCoeff=0.5703;MQ=57.74;MQ0=11;MQRankSum=-0.282;QD=6.97;ReadPosRankSum=-1.396;VQSLOD=0.8965;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:40.55:0,41,298	1/1:4,0:4:8.98:73,9,0	0/0:18,0:5:4.98:0,5,37	0/0:20,1:6:4.95:0,5,30	0/0:23,1:24:2.33:0,2,199	0/0:11,0:12:28.91:0,29,211	0/0:8,1:9:13.49:0,13,111	0/0:16,0:16:26.75:0,27,207	0/0:8,0:8:12.70:0,13,69	0/1:19,1:20:9:161,0,9	1/1:26,0:26:21.07:299,21,0	0/0:13,0:13:20.85:0,21,159	0/0:20,0:20:17.82:0,18,139	0/0:15,0:15:23.85:0,24,184	0/0:26,0:26:50.65:0,51,394	0/0:11,0:11:23.89:0,24,186	1/1:19,1:19:11.61:236,12,0	1/1:5,4:9:20.98:192,21,0	0/0:16,0:15:15.20:0,15,132	0/0:29,0:29:41.69:0,42,322	0/0:9,0:9:12.78:0,13,96	0/0:12,0:12:7.29:0,7,140	0/0:19,0:19:16.07:0,16,216	0/0:22,0:21:49.80:0,50,372	0/0:18,0:19:10.83:0,11,205	0/0:28,0:27:16.28:0,16,288	0/1:27,0:27:1.64:2,0,285	0/1:12,1:11:33.37:33,0,116
chr10	85999135	.	TCTGTCTCTGG	T	1651.62	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.284;DP=325;FS=0.926;HRun=0;HaplotypeScore=97.7538;InbreedingCoeff=0.9220;MQ=91.53;MQ0=0;MQRankSum=-6.693;QD=50.05;ReadPosRankSum=-0.873;VQSLOD=3.3369;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:20:30.10:996,30,0	0/0:4,0:4:12.04:0,12,559	0/0:16,0:16:42.14:0,42,1549	0/0:15,0:14:42.14:0,42,1950	0/0:10,0:10:30.10:0,30,1608	0/0:13,0:13:39.13:0,39,1943	1/1:1,11:12:24.08:776,24,0	0/0:17,0:17:48.16:0,48,2057	0/0:6,0:6:18.06:0,18,968	0/0:9,0:9:27.09:0,27,1458	0/0:9,0:9:27.07:0,27,1026	0/0:12,0:12:36.12:0,36,1835	0/0:8,0:8:24.08:0,24,1187	0/0:4,0:4:12.04:0,12,560	0/0:10,0:10:30.10:0,30,1390	0/0:6,0:6:18.06:0,18,850	0/0:16,0:16:48.16:0,48,2253	0/0:6,0:6:18.06:0,18,970	0/0:17,0:17:51.18:0,51,2577	0/0:18,0:18:54.19:0,54,2881	0/0:27,0:27:75.26:0,75,3840	0/0:3,0:3:9.03:0,9,391	0/0:7,0:7:21.07:0,21,1001	0/0:14,0:14:36.08:0,36,1800	0/0:8,0:7:24.08:0,24,1201	0/0:15,0:15:45.15:0,45,2238	0/0:15,0:15:45.15:0,45,2314	0/0:7,0:7:21.07:0,21,1045
chr10	85999190	.	A	AACACAC	1664.58	PASS	AB=1.000;AC=15;AF=0.288;AN=52;BaseQRankSum=1.008;DP=372;FS=3.722;HRun=0;HaplotypeScore=102.9628;InbreedingCoeff=0.7062;MQ=61.07;MQ0=15;MQRankSum=-1.611;QD=12.06;ReadPosRankSum=-2.330;VQSLOD=1.4693;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:24:14.78:297,15,0	1/1:3,0:4:6:86,6,0	./.	./.	0/0:9,0:10:21.07:0,21,366	0/0:15,0:15:14.86:0,15,242	1/1:11,0:9:3.46:24,3,0	0/1:21,0:19:24.72:25,0,90	0/0:6,0:10:16.21:0,16,207	1/1:15,10:24:35.15:615,35,0	1/1:6,4:14:12.04:287,12,0	0/0:14,0:14:12.47:0,12,169	0/0:8,0:9:15.52:0,16,305	0/0:4,0:4:9.03:0,9,181	0/0:7,0:8:15.05:0,15,261	0/0:9,0:10:21.05:0,21,336	1/1:13,4:20:13.35:414,13,0	1/1:8,0:12:6.16:90,6,0	0/0:10,0:11:9.55:0,10,186	0/0:16,0:17:21.05:0,21,380	0/0:17,0:16:12.03:0,12,204	0/0:1,0:1:3.01:0,3,61	0/0:8,0:8:9.02:0,9,131	0/0:10,0:12:18:0,18,271	0/0:8,0:5:9.50:0,10,162	0/0:19,0:19:29.31:0,29,525	0/0:17,0:17:23.82:0,24,472	0/0:3,0:3:3.01:0,3,61
chr10	86000207	.	C	CTT	1441.23	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=9.086;DP=621;FS=0.530;HRun=12;HaplotypeScore=97.5822;InbreedingCoeff=0.9079;MQ=75.97;MQ0=0;MQRankSum=-0.965;QD=13.86;ReadPosRankSum=-0.511;VQSLOD=2.4523;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:30:69.18:0,69,593	1/1:3,7:10:19.31:255,19,0	0/0:14,0:17:16.45:0,16,135	0/1:17,0:18:0.81:1,0,103	0/0:37,0:40:72.87:0,73,706	0/0:22,0:24:59.66:0,60,586	0/0:17,0:19:14.86:0,15,277	0/0:27,1:29:53.72:0,54,542	0/0:15,0:15:29.58:0,30,261	1/1:11,7:22:29.58:369,30,0	1/1:6,16:23:39.02:491,39,0	0/0:24,0:24:53.96:0,54,499	0/0:15,0:15:32.95:0,33,305	0/0:20,0:20:47.94:0,48,439	0/0:18,0:20:35.55:0,36,364	0/0:15,0:16:29.81:0,30,320	1/1:6,19:31:42.96:484,43,0	0/0:21,0:21:45.03:0,45,416	0/0:22,0:22:41.99:0,42,389	0/0:24,0:25:35.60:0,36,370	0/0:18,0:19:13.79:0,14,292	0/0:19,0:20:32.53:0,33,289	0/0:25,0:25:31.46:0,31,341	0/0:20,0:21:56.75:0,57,512	0/0:17,0:18:35.60:0,36,317	0/0:26,0:28:56.42:0,56,495	0/0:35,0:38:98.23:0,98,868	0/0:10,0:10:17.93:0,18,166
chr10	86001870	.	TACACAC	T	264.56	PASS	AC=12;AF=0.250;AN=48;BaseQRankSum=3.821;DP=440;FS=14.452;HRun=0;HaplotypeScore=89.0250;InbreedingCoeff=0.7134;MQ=59.22;MQ0=19;MQRankSum=-1.548;QD=3.01;ReadPosRankSum=1.596;VQSLOD=0.8421;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:11,0:11:15.03:0,15,287	./.	./.	0/0:8,0:12:16.90:0,17,500	0/0:22,0:22:15.03:0,15,291	./.	1/1:18,0:17:1.82:5,2,0	0/0:8,0:9:18.06:0,18,433	0/0:14,0:14:15.05:0,15,366	0/0:22,0:22:18.06:0,18,470	0/0:7,0:7:9.03:0,9,212	0/0:4,0:7:15.02:0,15,393	0/0:7,0:7:9.03:0,9,260	0/0:12,0:11:9.02:0,9,218	0/0:9,0:11:15.05:0,15,395	0/0:25,0:28:33.56:0,34,804	0/0:15,0:17:15.94:0,16,372	0/0:12,0:10:1.36:0,1,3	1/1:6,3:10:6.02:103,6,0	1/1:28,6:33:1.77:3,2,0	0/0:11,0:11:12.04:0,12,341	0/0:19,0:18:24.55:0,25,714	0/0:16,0:16:18.02:0,18,486	0/0:12,0:12:27.09:0,27,632	1/1:5,5:10:9.34:142,9,0	1/1:8,3:11:6.02:122,6,0	1/1:3,0:3:2.98:21,3,0
chr10	86002114	.	ACT	A	1203.62	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.477;DP=467;FS=0.719;HRun=0;HaplotypeScore=60.8236;InbreedingCoeff=0.9639;MQ=78.17;MQ0=2;MQRankSum=-3.166;QD=36.47;ReadPosRankSum=1.680;VQSLOD=5.8462;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:63.21:928,63,0	0/0:10,0:10:30.10:0,30,561	0/0:29,0:21:52.48:0,52,781	0/0:12,0:10:22.21:0,22,314	0/0:26,0:26:72.25:0,72,1340	0/0:16,0:16:48.16:0,48,891	1/1:0,10:11:27.09:397,27,0	0/0:32,0:32:93.30:0,93,1673	0/0:10,0:10:30.10:0,30,561	0/0:21,0:21:60.21:0,60,1124	0/0:13,0:13:39.10:0,39,666	0/0:12,0:12:36.12:0,36,658	0/0:11,0:11:30.10:0,30,545	0/0:9,0:9:27.06:0,27,470	0/0:8,0:8:24.08:0,24,449	0/0:14,0:14:39.12:0,39,698	0/0:33,0:33:78.27:0,78,1459	0/0:9,0:8:27.09:0,27,502	0/0:23,0:23:66.05:0,66,1163	0/0:15,0:15:45.15:0,45,842	0/0:18,0:18:52.42:0,52,957	0/0:23,0:23:63.22:0,63,1179	0/0:17,0:17:48.16:0,48,898	0/0:8,0:8:21.07:0,21,386	0/0:15,0:15:42.13:0,42,754	0/0:19,0:19:57.19:0,57,1041	0/0:24,0:24:69.24:0,69,1289	0/0:3,0:3:9.03:0,9,169
chr10	86002471	.	AAGGG	A	2800.92	PASS	AB=0.773;AC=13;AF=0.232;AN=56;BaseQRankSum=5.574;DP=391;FS=1.161;HRun=0;HaplotypeScore=72.8528;InbreedingCoeff=0.7586;MQ=65.64;MQ0=3;MQRankSum=0.445;QD=24.15;ReadPosRankSum=0.640;VQSLOD=3.0851;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:3.01:0,3,39	0/0:2,0:3:3.01:0,3,53	0/0:17,0:12:11.46:0,11,125	0/0:15,0:11:6.02:0,6,148	0/0:10,0:10:18.06:0,18,441	0/0:16,0:16:36.11:0,36,764	0/0:13,0:13:16.41:0,16,305	1/1:10,12:21:36.11:558,36,0	0/0:20,0:20:45.15:0,45,1049	0/0:7,0:18:31.74:0,32,385	0/0:3,0:11:21.07:0,21,357	0/0:16,0:16:42.14:0,42,984	0/0:18,0:18:51.18:0,51,1193	0/0:9,0:9:21.07:0,21,504	0/0:12,0:12:24.08:0,24,542	0/0:13,0:13:30.10:0,30,686	0/0:10,0:14:8.99:0,9,125	0/0:14,0:14:27.09:0,27,653	1/1:8,8:15:24.07:370,24,0	1/1:6,7:13:21.07:347,21,0	0/1:12,5:17:25.41:134,0,25	0/0:10,0:10:9.03:0,9,219	0/0:6,0:6:9.03:0,9,220	0/0:15,0:15:30.10:0,30,708	0/0:11,0:11:19.31:0,19,436	1/1:7,14:21:39.09:614,39,0	1/1:6,19:25:54.13:861,54,0	1/1:2,0:2:6.02:99,6,0
chr10	86002854	.	GAC	G	2721.82	PASS	AB=0.899;AC=10;AF=0.179;AN=56;BaseQRankSum=9.520;DP=602;FS=9.259;HRun=0;HaplotypeScore=74.6231;InbreedingCoeff=0.7164;MQ=70.37;MQ0=0;MQRankSum=-1.522;QD=23.07;ReadPosRankSum=2.992;VQSLOD=3.6741;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,135,2595	1/1:0,7:7:5.89:92,6,0	0/0:26,0:25:67.32:0,67,1082	0/0:33,0:33:93.67:0,94,1593	0/0:20,0:20:57.18:0,57,1054	0/0:27,0:27:81.25:0,81,1470	0/0:10,0:10:30.07:0,30,511	0/0:26,0:26:78.26:0,78,1467	0/0:18,0:18:54.19:0,54,1032	1/1:0,25:25:75.22:1086,75,0	1/1:0,7:7:12.04:183,12,0	0/0:28,0:28:84.23:0,84,1488	0/0:20,0:20:60.18:0,60,1117	0/0:18,0:18:51.12:0,51,874	0/0:29,0:29:87.28:0,87,1634	0/0:30,0:30:90.31:0,90,1720	1/1:1,34:35:93.32:1422,93,0	0/1:18,2:20:31.61:32,0,982	0/0:26,0:26:75.22:0,75,1337	0/0:6,0:6:18.06:0,18,347	0/0:29,0:29:84.25:0,84,1541	0/0:15,0:15:42.13:0,42,770	0/0:10,0:10:27.08:0,27,488	0/0:25,0:25:72.25:0,72,1389	0/0:8,0:8:24.05:0,24,396	0/1:21,3:24:68.49:68,0,1087	0/0:21,0:21:63.18:0,63,1145	0/0:11,0:11:33.11:0,33,636
chr10	86003363	.	G	GCCCT	7540.83	PASS	AC=24;AF=0.462;AN=52;BaseQRankSum=-9.600;DP=313;FS=38.053;HRun=0;HaplotypeScore=51.0063;InbreedingCoeff=0.9316;MQ=47.03;MQ0=5;MQRankSum=0.324;QD=64.45;ReadPosRankSum=0.476;VQSLOD=3.5048;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:10:24.08:686,24,0	1/1:0,1:1:3.01:86,3,0	0/0:31,0:13:39.13:0,39,745	0/0:18,0:10:29.98:0,30,457	0/0:20,0:20:57.18:0,57,1155	0/0:12,0:12:36.12:0,36,754	1/1:1,2:2:6.02:168,6,0	./.	0/0:7,0:7:21.03:0,21,397	1/1:1,9:11:33.11:917,33,0	1/1:1,13:12:18.06:515,18,0	0/0:9,0:9:27.09:0,27,566	0/0:7,0:7:21.07:0,21,435	0/0:12,0:12:36.12:0,36,754	0/0:13,0:13:33.11:0,33,691	0/0:12,0:12:33.11:0,33,692	1/1:1,20:23:57.20:1632,57,0	1/1:0,2:2:6.02:172,6,0	1/1:0,5:5:15.04:372,15,0	1/1:1,21:19:48.16:1371,48,0	./.	0/0:10,0:10:24.08:0,24,503	0/0:11,0:11:33.11:0,33,692	0/0:19,0:19:54.19:0,54,1128	0/0:15,0:15:45.15:0,45,944	1/1:0,11:9:24.02:686,24,0	1/1:0,6:8:21.07:592,21,0	1/1:0,4:4:12.04:344,12,0
chr10	86003613	.	AG	A	5313.84	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.380;DP=476;FS=2.274;HRun=1;HaplotypeScore=49.5581;InbreedingCoeff=0.9703;MQ=90.69;MQ0=0;MQRankSum=-3.006;QD=39.95;ReadPosRankSum=0.048;VQSLOD=5.1311;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.30:0,93,1449	0/0:3,0:3:9.03:0,9,144	0/0:21,0:21:60.20:0,60,951	0/0:20,0:20:57.19:0,57,905	0/0:14,0:14:39.10:0,39,563	0/0:22,0:22:60.20:0,60,956	0/0:31,0:31:87.30:0,87,1376	1/1:0,26:25:75.25:1046,75,0	0/0:16,0:16:45.15:0,45,719	0/0:19,0:19:54.18:0,54,843	0/0:11,0:11:30.10:0,30,467	0/0:16,0:16:48.15:0,48,744	0/0:10,0:10:30.10:0,30,473	0/0:19,0:19:54.18:0,54,859	0/0:16,0:16:48.16:0,48,767	0/0:18,0:18:54.16:0,54,817	0/0:26,0:26:72.25:0,72,1142	0/0:17,0:17:48.14:0,48,742	1/1:0,16:16:48.16:666,48,0	1/1:0,12:12:36.12:503,36,0	1/1:0,29:29:81.23:1111,81,0	0/0:3,0:3:9.03:0,9,144	0/0:4,0:4:12.04:0,12,192	0/0:17,0:17:51.17:0,51,814	0/0:6,0:6:18.06:0,18,286	1/1:1,24:25:27.26:939,27,0	1/1:0,19:19:57.19:797,57,0	1/1:0,6:6:18.06:252,18,0
chr10	86003837	.	G	GA	1120.39	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=0.441;DP=389;FS=11.340;HRun=6;HaplotypeScore=52.8135;InbreedingCoeff=0.8681;MQ=74.37;MQ0=1;MQRankSum=-2.953;QD=24.36;ReadPosRankSum=0.308;VQSLOD=2.6484;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:53.69:0,54,487	./.	0/0:22,0:18:29.22:0,29,318	0/0:25,0:17:2.13:0,2,99	0/0:26,0:26:54.02:0,54,535	0/0:16,0:16:38.74:0,39,368	0/0:8,0:8:21.05:0,21,214	0/0:25,0:25:66.11:0,66,652	0/0:13,0:13:38.95:0,39,381	1/1:3,13:16:42.13:527,42,0	1/1:3,10:13:24.07:300,24,0	0/0:12,0:12:29.74:0,30,286	0/0:8,0:8:18.04:0,18,183	0/0:11,0:11:27.05:0,27,269	0/0:16,0:16:42:0,42,409	0/0:14,0:14:27.02:0,27,260	1/1:6,11:17:11.14:430,11,0	0/0:17,0:17:42.03:0,42,415	0/0:13,0:13:30.02:0,30,296	0/0:10,0:10:30.06:0,30,305	0/0:9,0:9:18.04:0,18,183	0/0:3,0:3:9.02:0,9,91	0/0:7,0:7:9.02:0,9,92	0/0:11,0:11:21.04:0,21,213	0/0:9,0:9:15.03:0,15,153	0/0:20,0:20:51.08:0,51,509	0/0:13,0:13:33.05:0,33,326	0/0:12,0:12:28.09:0,28,302
chr10	86003885	.	AAAAG	A	271.66	PASS	AB=0.961;AC=7;AF=0.125;AN=56;BaseQRankSum=2.464;DP=365;FS=27.668;HRun=0;HaplotypeScore=76.6513;InbreedingCoeff=0.2845;MQ=56.25;MQ0=10;MQRankSum=-2.852;QD=4.18;ReadPosRankSum=-1.129;VQSLOD=0.1161;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:45.48:0,45,416	1/1:2,0:2:3.22:13,3,0	0/0:19,0:5:10.16:0,10,123	0/0:28,0:7:5.80:0,6,42	0/0:25,0:23:22.25:0,22,611	0/0:16,0:16:35.47:0,35,585	0/0:7,0:6:10.27:0,10,59	0/1:23,0:21:9.34:9,0,482	0/0:13,0:13:28.77:0,29,491	1/1:11,2:11:4.77:147,5,0	0/1:12,0:12:43.48:50,0,43	0/0:10,0:10:14.75:0,15,315	0/0:4,0:4:11.97:0,12,95	0/0:8,0:8:22.84:0,23,291	0/0:7,0:6:15.03:0,15,225	0/0:9,0:9:23.98:0,24,323	0/1:13,2:15:32.79:171,0,33	0/0:14,0:14:10.58:0,11,220	0/0:22,0:20:32.41:0,32,380	0/0:7,0:7:18:0,18,221	0/0:3,0:3:9:0,9,103	0/0:6,0:6:14.98:0,15,167	0/0:11,0:11:2.85:0,3,174	0/0:10,0:10:21.99:0,22,250	0/0:15,0:15:19.30:0,19,444	0/0:24,0:23:56.59:0,57,868	0/0:11,0:11:29.63:0,30,373	0/0:11,0:11:16.79:0,17,259
chr10	86004227	.	T	TA	1543.69	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-5.601;DP=463;FS=0.000;HRun=10;HaplotypeScore=52.8138;InbreedingCoeff=0.9711;MQ=67.66;MQ0=1;MQRankSum=-0.714;QD=20.31;ReadPosRankSum=1.536;VQSLOD=4.4415;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:72.25:0,72,674	1/1:1,12:13:30.08:320,30,0	0/0:19,0:9:17.47:0,17,114	0/0:20,0:13:14.03:0,14,112	0/0:26,0:26:65.89:0,66,542	0/0:27,0:27:65.90:0,66,538	0/0:8,0:8:15.30:0,15,141	0/0:23,0:21:53.88:0,54,437	0/0:6,0:6:11.97:0,12,95	1/1:6,16:20:47.95:478,48,0	1/1:3,12:15:36.09:384,36,0	0/0:9,0:9:26.97:0,27,221	0/0:16,0:16:38.93:0,39,318	0/0:8,0:9:26.01:0,26,203	0/0:15,0:15:35.95:0,36,296	0/0:10,0:11:28.93:0,29,220	1/1:4,21:25:50.96:523,51,0	0/0:13,1:15:28.90:0,29,220	0/0:18,0:19:34.74:0,35,259	0/0:18,0:18:47.92:0,48,392	0/0:14,0:14:35.92:0,36,292	0/0:8,0:8:21.45:0,21,173	0/0:14,0:13:32.85:0,33,259	0/0:9,0:9:20.98:0,21,172	0/0:19,0:20:49.96:0,50,397	0/0:21,1:24:25.97:0,26,393	0/0:17,0:17:46.97:0,47,373	0/0:6,0:6:14.98:0,15,123
chr10	86004421	.	A	ATG	2023.34	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.195;DP=656;FS=0.564;HRun=0;HaplotypeScore=93.5078;InbreedingCoeff=0.8284;MQ=63.26;MQ0=3;MQRankSum=2.383;QD=26.28;ReadPosRankSum=0.133;VQSLOD=4.6189;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,28:43:75.14:1170,75,0	0/0:2,0:2:6.02:0,6,72	0/0:39,0:11:8.73:0,9,65	0/0:36,0:18:12.23:0,12,252	0/0:20,0:20:41.86:0,42,479	0/0:17,0:17:33.07:0,33,383	1/1:9,25:34:42.49:975,42,0	0/0:23,0:23:2.97:0,3,239	0/0:24,0:25:56.99:0,57,649	0/0:21,0:22:44.93:0,45,494	0/0:12,0:12:30.08:0,30,347	0/0:21,0:21:45.12:0,45,522	0/0:22,0:22:51.16:0,51,612	0/0:21,0:21:50.61:0,51,610	0/0:33,1:34:30.08:0,30,829	0/0:24,0:25:53.97:0,54,602	0/0:21,0:21:51.14:0,51,598	0/0:15,0:15:32.66:0,33,355	0/0:14,0:13:17.67:0,18,131	0/0:21,0:21:28.88:0,29,413	0/0:46,0:46:99:0,102,882	0/0:12,0:12:27.08:0,27,324	0/0:16,0:16:39.02:0,39,433	0/0:39,0:39:69.19:0,69,803	0/0:18,0:18:42.12:0,42,492	0/0:27,0:27:23.92:0,24,210	0/0:18,0:18:24.01:0,24,224	0/0:11,0:11:24.03:0,24,229
chr10	86004554	.	TC	T	3877.63	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.384;DP=656;FS=5.672;HRun=2;HaplotypeScore=68.3073;InbreedingCoeff=0.9994;MQ=70.35;MQ0=0;MQRankSum=-3.299;QD=38.39;ReadPosRankSum=-0.012;VQSLOD=4.1006;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,2068	1/1:0,10:10:30.10:413,30,0	0/0:26,0:26:46.97:0,47,1053	0/0:24,0:24:55.19:0,55,850	0/0:30,0:30:87.28:0,87,1364	0/0:22,0:22:66.19:0,66,1006	0/0:35,0:35:99:0,105,1580	0/0:19,0:19:57.18:0,57,888	0/0:21,0:21:63.20:0,63,982	1/1:1,37:38:99:1564,114,0	1/1:0,14:14:30.06:396,30,0	0/0:24,0:24:72.16:0,72,1096	0/0:12,0:12:36.12:0,36,575	0/0:16,0:16:48.16:0,48,767	0/0:22,0:22:66.23:0,66,1055	0/0:24,0:24:72.23:0,72,1125	1/1:0,29:29:81.27:1132,81,0	1/1:0,10:10:27.09:373,27,0	0/0:14,0:14:42.14:0,42,660	0/0:26,0:26:78.27:0,78,1243	0/0:42,0:42:99:0,123,1910	0/0:22,0:22:66.21:0,66,1031	0/0:17,0:17:51.17:0,51,811	0/0:18,0:18:51.16:0,51,780	0/0:25,0:25:72.24:0,72,1140	0/0:30,0:30:90.30:0,90,1410	0/0:28,0:28:84.25:0,84,1294	0/0:12,0:12:36.12:0,36,575
chr10	86004628	.	CT	C	89.87	PASS	AB=0.856;AC=13;AF=0.232;AN=56;BaseQRankSum=0.765;DP=610;FS=4.110;HRun=17;HaplotypeScore=84.3506;InbreedingCoeff=-0.2651;MQ=65.54;MQ0=3;MQRankSum=1.696;QD=0.34;ReadPosRankSum=4.005;VQSLOD=-0.7446;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:20,9:30:27.76:28,0,136	0/0:15,0:15:16.90:0,17,74	0/0:19,1:11:11.99:0,12,98	0/1:9,0:7:5.72:6,0,7	0/1:23,5:29:19.42:19,0,151	0/0:13,3:17:17.37:0,17,181	0/1:16,2:18:8.35:8,0,117	0/0:34,0:35:37.16:0,37,301	0/1:21,1:26:20.34:20,0,178	0/0:39,3:42:11.20:0,11,167	0/0:25,0:25:42.53:0,43,234	0/1:12,1:15:8.82:9,0,127	0/0:17,0:18:18.36:0,18,147	0/0:12,1:13:14.92:0,15,113	0/1:21,6:27:21.46:21,0,196	0/0:22,3:25:16.13:0,16,215	0/0:23,2:25:17.19:0,17,190	0/0:22,0:24:62.01:0,62,281	0/0:20,2:21:2.73:0,3,177	0/0:17,0:18:29.82:0,30,223	0/0:16,1:20:13.30:0,13,170	0/1:12,4:16:30.71:31,0,146	0/1:13,0:16:4.72:5,0,87	0/1:12,4:16:23.44:23,0,109	0/0:23,2:25:8.86:0,9,227	0/1:12,5:17:49.09:49,0,97	0/1:21,4:27:9.24:9,0,217	0/1:15,4:20:3.11:3,0,222
chr10	86004642	.	T	TTC	973.66	PASS	AB=0.973;AC=8;AF=0.143;AN=56;BaseQRankSum=3.176;DP=626;FS=7.060;HRun=0;HaplotypeScore=96.6814;InbreedingCoeff=0.3953;MQ=71.50;MQ0=3;MQRankSum=0.555;QD=7.27;ReadPosRankSum=2.936;VQSLOD=2.2793;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:67.14:0,67,596	1/1:7,0:9:6.02:77,6,0	0/0:28,0:15:23.15:0,23,250	0/1:17,0:14:8.26:8,0,99	0/0:30,0:30:77.44:0,77,711	0/0:21,0:21:39.88:0,40,370	0/0:15,0:15:35.84:0,36,337	0/0:36,0:36:97.05:0,97,913	0/0:24,0:24:59.80:0,60,546	0/1:34,0:35:12.85:218,0,13	0/1:21,0:22:50.01:50,0,95	0/0:17,0:17:44.95:0,45,434	0/0:17,0:17:43.70:0,44,385	0/0:15,0:15:36:0,36,352	0/0:28,0:28:78.02:0,78,775	0/0:23,0:23:62.92:0,63,621	0/1:24,0:25:58.57:89,0,59	1/1:12,8:26:44.04:671,44,0	0/0:19,0:18:44.80:0,45,436	0/0:23,0:23:62.94:0,63,576	0/0:21,0:21:49.53:0,50,477	0/0:19,0:19:52.19:0,52,488	0/0:17,0:17:40.69:0,41,369	0/0:17,0:17:38.98:0,39,393	0/0:24,0:24:62.96:0,63,617	0/0:17,0:17:47.06:0,47,432	0/0:29,0:29:64.17:0,64,657	0/0:21,0:21:59.05:0,59,588
chr10	86004872	.	A	ACAAT	2032.84	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.049;DP=702;FS=9.054;HRun=0;HaplotypeScore=116.4265;InbreedingCoeff=0.8535;MQ=68.67;MQ0=2;MQRankSum=0.931;QD=32.79;ReadPosRankSum=0.204;VQSLOD=3.4239;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,24:35:54.19:1292,54,0	0/0:3,0:2:3:0,3,28	0/0:31,0:25:23.94:0,24,281	0/0:25,0:23:18.01:0,18,209	0/0:35,0:35:45.14:0,45,686	0/0:27,0:27:51.15:0,51,761	1/1:10,14:26:36.12:862,36,0	0/0:35,0:35:48.12:0,48,628	0/0:30,0:30:63.20:0,63,980	0/0:29,0:29:26.06:0,26,228	0/0:18,0:18:14.51:0,15,121	0/0:30,0:30:66.21:0,66,1028	0/0:20,0:20:33.08:0,33,491	0/0:23,0:23:24.05:0,24,336	0/0:41,0:41:69.21:0,69,1048	0/0:27,0:27:45.12:0,45,653	0/0:12,0:12:6.01:0,6,56	0/0:8,0:18:24.03:0,24,223	0/0:21,0:21:24.07:0,24,361	0/0:22,0:22:36.11:0,36,544	0/0:24,0:24:42.13:0,42,638	0/0:20,0:20:33.09:0,33,476	0/0:18,0:18:27.07:0,27,396	0/0:26,0:26:45.14:0,45,695	0/0:20,0:20:33.08:0,33,461	0/0:29,0:29:51.16:0,51,758	0/0:36,0:36:66.20:0,66,1000	0/0:19,0:19:18.04:0,18,262
chr10	86004897	.	CAATCAATA	C	2145.13	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.628;DP=623;FS=17.852;HRun=0;HaplotypeScore=156.3634;InbreedingCoeff=0.9689;MQ=66.99;MQ0=2;MQRankSum=-2.213;QD=36.36;ReadPosRankSum=-1.009;VQSLOD=1.9970;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:90.23:0,90,2530	1/1:1,5:5:5.93:101,6,0	0/0:26,0:22:60.15:0,60,1329	0/0:23,0:19:45.12:0,45,1059	0/0:24,0:24:60.19:0,60,2203	0/0:28,0:28:84.23:0,84,2853	0/0:26,0:26:66.12:0,66,1618	0/0:34,0:34:99:0,99,2667	0/0:26,0:26:78.23:0,78,2971	1/1:3,21:24:56.97:1094,57,0	1/1:0,17:17:38.79:738,39,0	0/0:28,0:28:84.24:0,84,3124	0/0:19,0:19:57.01:0,57,1819	0/0:17,0:17:45.15:0,45,1444	0/0:37,0:37:99:0,105,3544	0/0:22,0:22:66.19:0,66,2313	1/1:10,2:12:29.81:366,30,0	0/0:12,0:11:27.07:0,27,316	0/0:20,0:20:54.14:0,54,1464	0/0:20,0:20:54.16:0,54,1845	0/0:20,0:20:57.16:0,57,2086	0/0:20,0:20:54.08:0,54,1665	0/0:16,0:16:45.12:0,45,1433	0/0:21,0:21:63.18:0,63,2294	0/0:17,0:17:45.14:0,45,1585	0/0:27,0:27:78.21:0,78,2608	0/0:31,0:31:84.26:0,84,3090	0/0:9,0:9:27.06:0,27,876
chr10	86004976	.	CTG	C	1156.36	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.659;DP=537;FS=5.752;HRun=0;HaplotypeScore=65.2251;InbreedingCoeff=0.9603;MQ=90.90;MQ0=0;MQRankSum=-3.693;QD=29.65;ReadPosRankSum=0.161;VQSLOD=4.4658;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:21:48.16:659,48,0	0/0:6,0:6:9.03:0,9,159	0/0:22,0:22:63.21:0,63,1053	0/0:29,0:29:77.29:0,77,1258	0/0:6,0:6:18.04:0,18,290	0/0:24,0:24:69.21:0,69,1162	1/1:0,18:18:45.15:618,45,0	0/0:44,0:43:99:0,120,2086	0/0:23,0:23:63.22:0,63,1118	0/0:17,0:17:45.14:0,45,769	0/0:9,0:9:24.08:0,24,424	0/0:16,0:16:42.13:0,42,714	0/0:17,0:17:48.16:0,48,846	0/0:13,0:13:36.11:0,36,609	0/0:36,0:36:93.32:0,93,1650	0/0:27,0:27:72.25:0,72,1266	0/0:18,0:18:45.15:0,45,798	0/0:17,0:17:45.15:0,45,786	0/0:30,0:30:75.24:0,75,1282	0/0:10,0:10:27.09:0,27,479	0/0:18,0:18:54.18:0,54,946	0/0:7,0:7:21.06:0,21,332	0/0:8,0:8:21.07:0,21,372	0/0:15,0:15:42.14:0,42,745	0/0:13,0:13:36.11:0,36,606	0/0:30,0:30:84.29:0,84,1482	0/0:35,0:35:96.33:0,96,1701	0/0:8,0:8:24.08:0,24,426
chr10	86005144	.	C	CT	592.44	PASS	AB=0.641;AC=10;AF=0.179;AN=56;BaseQRankSum=6.499;DP=346;FS=1.420;HRun=12;HaplotypeScore=41.5241;InbreedingCoeff=0.5512;MQ=61.78;MQ0=3;MQRankSum=0.095;QD=9.87;ReadPosRankSum=0.849;VQSLOD=2.1536;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:15:27.67:0,28,183	1/1:0,3:3:6.01:58,6,0	1/1:13,0:5:0.48:1,0,0	0/0:10,0:4:2.93:0,3,18	0/0:20,0:21:38.55:0,39,270	0/0:16,1:17:6.58:0,7,211	0/0:1,0:1:2.98:0,3,22	0/0:21,0:21:38.67:0,39,278	0/0:9,0:9:19.92:0,20,135	1/1:5,7:12:2.06:161,2,0	1/1:3,11:14:26.86:251,27,0	0/0:7,0:7:5.94:0,6,44	0/0:6,0:6:14.91:0,15,109	0/0:3,0:3:2.94:0,3,21	0/0:13,0:14:37.82:0,38,267	0/0:9,0:9:20.87:0,21,152	0/1:5,5:10:3.80:128,0,4	0/1:3,5:8:3.88:128,0,4	0/0:19,0:18:35.73:0,36,261	0/0:18,0:18:43.75:0,44,308	0/0:9,0:9:11.89:0,12,88	0/0:13,0:13:26.82:0,27,197	0/0:21,0:21:56.04:0,56,400	0/0:6,0:6:14.89:0,15,109	0/0:9,0:9:23.86:0,24,175	0/0:22,0:23:40.74:0,41,290	0/0:16,0:18:38.37:0,38,339	0/0:15,0:15:26.44:0,26,196
chr10	86006063	.	G	GACCGA	1304.44	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=-3.732;DP=368;FS=0.000;HRun=0;HaplotypeScore=68.8395;InbreedingCoeff=0.8120;MQ=41.56;MQ0=49;MQRankSum=-2.322;QD=24.61;ReadPosRankSum=-0.348;VQSLOD=3.0490;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:25:48.16:0,48,954	1/1:2,2:3:6.02:180,6,0	./.	./.	0/0:13,0:11:21.07:0,21,423	0/0:14,0:12:27.02:0,27,492	0/0:21,0:12:27.02:0,27,434	0/0:19,0:7:12.04:0,12,241	0/0:12,0:9:20.89:0,21,422	1/1:9,8:15:27.06:619,27,0	1/1:5,7:9:2.92:17,3,0	0/0:8,0:6:6.49:0,6,122	0/0:13,0:11:27.05:0,27,503	0/0:5,0:4:6.02:0,6,121	0/0:15,0:9:18.05:0,18,319	0/0:14,0:10:21.07:0,21,422	1/1:4,11:12:21.07:628,21,0	0/0:16,0:13:27.05:0,27,486	0/0:23,0:16:42.14:0,42,844	0/0:8,0:7:18.06:0,18,362	0/0:14,0:13:33.10:0,33,629	0/0:12,0:9:15.05:0,15,302	0/0:13,0:11:30.09:0,30,571	0/0:18,0:13:30.10:0,30,599	0/0:3,0:3:6.02:0,6,121	0/0:17,0:13:36.07:0,36,651	0/0:15,0:14:30.10:0,30,604	0/0:8,0:8:18.06:0,18,359
chr10	86006462	.	C	CA	935.47	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.379;DP=541;FS=4.719;HRun=6;HaplotypeScore=53.4270;InbreedingCoeff=0.9841;MQ=85.66;MQ0=0;MQRankSum=-3.850;QD=23.99;ReadPosRankSum=1.670;VQSLOD=3.2121;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:28:57.18:717,57,0	0/0:10,0:10:24.05:0,24,244	0/0:20,0:20:38.98:0,39,361	0/0:15,0:15:20.57:0,21,252	0/0:21,0:21:54.12:0,54,550	0/0:14,0:14:33.07:0,33,336	1/1:2,9:11:27.09:340,27,0	0/0:23,0:23:54.11:0,54,545	0/0:18,0:18:51.08:0,51,505	0/0:22,0:22:63.13:0,63,637	0/0:25,0:25:63.11:0,63,628	0/0:19,0:19:45.08:0,45,452	0/0:12,0:12:24.05:0,24,245	0/0:18,0:18:45.10:0,45,458	0/0:26,0:26:63.12:0,63,635	0/0:27,0:27:75.17:0,75,765	0/0:23,0:23:57.12:0,57,581	0/0:15,0:15:38.85:0,39,389	0/0:9,0:9:27.06:0,27,275	0/0:31,0:31:90.17:0,90,902	0/0:8,0:8:20.99:0,21,191	0/0:22,0:22:63.13:0,63,637	0/0:19,0:19:54.12:0,54,551	0/0:17,0:17:39.08:0,39,398	0/0:23,0:23:54.10:0,54,544	0/0:21,0:21:57.10:0,57,566	0/0:39,0:39:99:0,102,1031	0/0:5,0:5:15.03:0,15,152
chr10	86007516	.	A	AGTCT	4594.80	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.152;DP=665;FS=2.264;HRun=0;HaplotypeScore=103.4312;InbreedingCoeff=0.9720;MQ=68.62;MQ0=4;MQRankSum=-0.660;QD=46.41;ReadPosRankSum=1.954;VQSLOD=5.4440;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:90.25:0,90,1403	1/1:1,7:8:18.06:442,18,0	0/0:41,0:29:45.10:0,45,651	0/0:27,0:25:40.42:0,40,633	0/0:35,0:35:87.21:0,87,1312	0/0:23,0:23:45.15:0,45,746	0/0:22,0:22:51.17:0,51,845	0/0:26,0:26:54.15:0,54,796	0/0:33,0:33:84.18:0,84,1216	1/1:3,14:18:41.89:895,42,0	1/1:4,15:20:42.14:1032,42,0	0/0:29,0:29:69.20:0,69,1086	0/0:20,0:20:42.11:0,42,639	0/0:20,0:20:42.14:0,42,696	0/0:26,0:26:66.20:0,66,1038	0/0:18,0:18:45.15:0,45,746	1/1:7,25:33:60.21:1474,60,0	1/1:4,14:20:32.94:752,33,0	0/0:8,0:8:18.04:0,18,268	0/0:29,0:29:66.21:0,66,1069	0/0:41,0:41:93.28:0,93,1467	0/0:17,0:17:48.15:0,48,759	0/0:21,0:21:42.14:0,42,693	0/0:24,0:24:48.16:0,48,788	0/0:16,0:16:27.06:0,27,396	0/0:27,0:27:57.18:0,57,899	0/0:21,0:20:48.16:0,48,791	0/0:3,0:3:6.02:0,6,99
chr10	86008636	.	G	GA	3496.97	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-9.836;DP=600;FS=2.909;HRun=9;HaplotypeScore=62.9272;InbreedingCoeff=0.9964;MQ=70.04;MQ0=0;MQRankSum=-1.451;QD=25.16;ReadPosRankSum=-1.847;VQSLOD=3.8463;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:80.97:0,81,701	0/0:6,0:6:15:0,15,130	0/0:25,0:24:47.46:0,47,385	0/0:25,0:24:47.78:0,48,390	0/0:28,0:28:74.97:0,75,650	0/0:25,0:25:62.92:0,63,539	0/0:21,0:21:56.98:0,57,495	1/1:5,17:23:53.97:552,54,0	0/0:19,0:19:41.98:0,42,365	0/0:25,0:25:62.92:0,63,536	0/0:29,0:29:66.84:0,67,585	0/0:31,0:31:77.80:0,78,673	0/0:16,0:16:38.93:0,39,330	0/0:11,0:11:26.98:0,27,234	0/0:22,1:23:26.80:0,27,462	0/0:15,0:15:38.95:0,39,333	0/0:31,0:31:71.95:0,72,625	0/0:19,0:19:38.96:0,39,334	1/1:5,23:28:73.12:766,73,0	1/1:3,16:20:41.95:445,42,0	1/1:2,14:17:41.95:446,42,0	0/0:22,0:22:56.98:0,57,494	0/0:23,1:24:32.79:0,33,510	0/0:25,0:25:62.97:0,63,544	0/0:11,0:11:29.97:0,30,256	1/1:4,16:20:48.11:521,48,0	1/1:6,15:21:42.09:454,42,0	1/1:0,9:10:29.91:312,30,0
chr10	86009461	.	AC	A	4209.71	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=11.931;DP=759;FS=2.718;HRun=1;HaplotypeScore=85.5931;InbreedingCoeff=0.8843;MQ=80.39;MQ0=0;MQRankSum=-0.912;QD=28.06;ReadPosRankSum=0.846;VQSLOD=3.5362;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,100,1854	1/1:0,11:11:33.11:462,33,0	0/0:33,0:31:16.12:0,16,1176	0/1:40,0:40:48.22:48,0,1186	0/0:28,0:28:81.28:0,81,1293	0/0:21,0:21:54.18:0,54,858	0/0:19,0:19:57.19:0,57,911	0/0:35,0:35:99:0,105,1653	0/0:35,0:35:99:0,105,1671	1/1:0,37:37:99:1518,111,0	1/1:0,21:21:51.17:713,51,0	0/0:29,0:29:87.30:0,87,1387	0/0:19,0:19:57.19:0,57,911	0/0:18,0:18:54.17:0,54,835	0/0:33,0:33:99:0,99,1579	0/0:26,0:26:78.27:0,78,1243	1/1:0,25:25:60.20:839,60,0	1/1:0,16:16:45.15:629,45,0	0/0:28,0:28:84.26:0,84,1315	0/0:43,0:43:99:0,129,2046	0/0:28,0:28:84.25:0,84,1295	0/0:25,0:25:66.22:0,66,1048	0/0:29,0:29:84.29:0,84,1325	0/0:24,0:24:72.22:0,72,1126	0/0:19,0:19:57.19:0,57,906	0/0:30,1:31:51.33:0,51,1375	0/0:29,0:29:87.30:0,87,1389	0/0:13,0:13:39.13:0,39,623
chr10	86009686	.	C	CT	1093.89	PASS	AB=0.840;AC=7;AF=0.125;AN=56;BaseQRankSum=4.852;DP=635;FS=18.191;HRun=10;HaplotypeScore=77.2192;InbreedingCoeff=0.4812;MQ=70.42;MQ0=0;MQRankSum=-0.797;QD=10.72;ReadPosRankSum=0.092;VQSLOD=1.0962;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:9,16:26:66.86:417,0,67	0/0:7,0:9:22.05:0,22,160	0/0:17,0:16:29.89:0,30,240	0/0:14,0:14:20:0,20,153	0/0:29,1:31:36.85:0,37,501	0/0:31,1:33:56.95:0,57,663	1/1:3,20:23:4.85:462,5,0	0/0:25,0:26:61.93:0,62,493	0/0:32,0:32:74.85:0,75,612	0/0:22,0:23:46.94:0,47,375	0/0:14,0:14:38.95:0,39,320	0/1:20,1:22:3.21:3,0,322	0/1:15,1:17:16.93:17,0,273	0/0:14,0:16:34.98:0,35,276	0/0:25,0:25:62.89:0,63,514	0/0:20,1:21:24.92:0,25,406	0/0:27,0:29:66.52:0,67,586	1/1:4,9:14:32.88:324,33,0	0/0:22,0:22:50.91:0,51,415	0/0:28,0:28:74.91:0,75,616	0/0:29,2:31:16.93:0,17,551	0/0:16,0:16:38.95:0,39,320	0/0:31,0:31:68.75:0,69,586	0/0:17,1:20:17.03:0,17,325	0/0:20,1:21:21.93:0,22,387	0/0:29,0:29:71.88:0,72,589	0/0:22,0:22:59.88:0,60,484	0/0:21,0:22:61.61:0,62,494
chr10	86012706	.	T	TGG	5835.90	PASS	AB=0.638;AC=21;AF=0.375;AN=56;BaseQRankSum=12.093;DP=489;FS=13.586;HRun=5;HaplotypeScore=88.0113;InbreedingCoeff=0.7114;MQ=68.32;MQ0=26;MQRankSum=-9.820;QD=32.79;ReadPosRankSum=-1.167;VQSLOD=3.2782;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:87.28:0,87,1109	1/1:3,2:5:3.01:52,3,0	0/0:17,0:11:21.05:0,21,255	0/0:25,0:18:28.68:0,29,375	0/0:25,0:23:60.19:0,60,765	0/0:17,0:15:45.14:0,45,574	0/0:22,0:18:51.15:0,51,637	1/1:7,9:16:33.07:514,33,0	0/0:19,0:19:57.18:0,57,726	0/1:6,11:15:75.59:480,0,76	1/1:1,16:17:45.15:738,45,0	0/0:20,0:20:60.19:0,60,764	0/0:13,0:12:33.11:0,33,419	0/0:12,0:10:27.09:0,27,344	0/0:20,0:19:54.17:0,54,686	0/0:22,0:21:63.20:0,63,803	1/1:4,15:17:45.15:780,45,0	1/1:4,12:17:6.88:642,7,0	0/1:7,8:12:11.15:385,0,11	1/1:2,7:7:21.07:358,21,0	1/1:6,9:13:4.15:330,4,0	0/0:14,0:14:39.11:0,39,483	0/0:19,0:18:51.16:0,51,650	0/0:19,0:18:39.12:0,39,497	0/0:11,0:11:33.11:0,33,420	0/1:8,9:16:72.55:521,0,73	1/1:0,17:16:36.01:621,36,0	1/1:5,9:13:24.08:416,24,0
chr10	86012768	.	CG	C	2106.04	PASS	AB=0.637;AC=19;AF=0.365;AN=52;BaseQRankSum=9.566;DP=292;FS=7.899;HRun=2;HaplotypeScore=62.8590;InbreedingCoeff=0.4991;MQ=39.64;MQ0=37;MQRankSum=-9.843;QD=17.26;ReadPosRankSum=-1.345;VQSLOD=2.7877;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:19:36.12:0,36,520	1/1:0,5:5:6.02:78,6,0	./.	./.	0/0:17,0:16:42.14:0,42,611	0/0:15,0:13:39.13:0,39,580	0/0:8,0:4:9.03:0,9,134	1/1:2,5:5:12.04:156,12,0	0/0:11,0:11:33.11:0,33,483	0/1:3,8:9:99:206,0,108	1/1:0,9:9:18.06:233,18,0	0/0:11,0:11:33.11:0,33,494	0/0:5,0:3:9.03:0,9,135	0/0:7,0:4:9.03:0,9,134	0/0:12,0:11:33.11:0,33,493	0/0:19,0:18:54.18:0,54,807	1/1:1,6:5:15.05:195,15,0	0/1:6,11:15:53.53:350,0,54	0/1:14,7:8:23.93:193,0,24	1/1:0,7:6:9.03:117,9,0	0/1:3,3:5:32.38:101,0,32	0/0:8,0:8:21.07:0,21,315	0/0:13,0:12:33.11:0,33,494	0/0:12,0:9:15.05:0,15,211	0/0:7,0:7:18.06:0,18,269	0/1:4,10:13:98.77:314,0,99	1/1:0,10:9:21.07:272,21,0	1/1:2,6:6:6.02:78,6,0
chr10	86012825	.	T	TGG	605.47	PASS	AB=0.803;AC=5;AF=0.089;AN=56;BaseQRankSum=6.192;DP=321;FS=21.196;HRun=5;HaplotypeScore=59.2211;InbreedingCoeff=-0.1105;MQ=56.82;MQ0=19;MQRankSum=-5.499;QD=10.09;ReadPosRankSum=0.627;VQSLOD=-0.5038;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:57.15:0,57,706	0/0:4,0:4:9.03:0,9,115	0/0:30,0:10:10.15:0,10,125	0/0:20,0:6:8.89:0,9,87	0/0:14,0:13:30.09:0,30,382	0/0:8,0:8:21.02:0,21,249	0/0:15,0:9:24.08:0,24,305	0/0:9,0:7:21.07:0,21,268	0/0:10,0:10:24.05:0,24,278	0/0:15,0:11:21.07:0,21,268	0/0:10,0:10:18.05:0,18,229	0/0:6,0:6:15.04:0,15,177	0/0:6,0:6:18.06:0,18,228	0/0:8,0:8:24.06:0,24,292	0/0:7,0:6:18.06:0,18,229	0/0:10,0:10:24.07:0,24,293	0/1:13,4:17:99:163,0,375	0/1:11,5:16:99:259,0,299	0/1:8,1:6:36.85:37,0,138	0/0:6,0:5:15.05:0,15,191	0/1:4,5:8:55.35:233,0,55	0/0:10,0:9:21.02:0,21,249	0/0:10,0:9:15.04:0,15,191	0/0:10,0:10:27.04:0,27,326	0/0:14,0:12:20.99:0,21,267	0/0:10,0:9:21.07:0,21,267	0/1:8,1:9:30.29:30,0,208	0/0:6,0:6:12.04:0,12,152
chr10	86012902	.	G	GA	858.95	PASS	AB=0.920;AC=19;AF=0.339;AN=56;BaseQRankSum=7.111;DP=391;FS=9.301;HRun=11;HaplotypeScore=82.6252;InbreedingCoeff=0.5513;MQ=59.18;MQ0=11;MQRankSum=-6.671;QD=5.73;ReadPosRankSum=-2.112;VQSLOD=0.9700;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:30:50.57:0,51,383	0/1:5,1:6:8.75:58,0,9	0/0:15,0:5:8.88:0,9,69	0/1:14,0:6:10.39:10,0,22	0/0:25,0:26:33.28:0,33,386	0/0:16,0:16:35.73:0,36,266	0/0:18,1:20:34.84:0,35,255	1/1:12,0:9:8.07:20,8,0	0/0:14,1:15:11.41:0,11,271	1/1:18,3:21:27.52:180,28,0	1/1:7,7:14:10.71:95,11,0	0/0:9,0:9:17.78:0,18,139	0/0:16,0:16:43.94:0,44,313	0/0:10,0:10:17.84:0,18,134	0/0:9,0:8:14.90:0,15,116	0/0:15,0:15:38.75:0,39,295	1/1:16,1:16:26.70:214,27,0	0/1:10,9:19:6.70:273,0,7	0/1:5,0:5:0:0,0,0	1/1:16,0:16:25.15:152,25,0	0/1:3,0:3:0:0,0,0	0/1:10,1:11:15.55:16,0,76	0/0:12,0:12:20.09:0,20,137	0/0:19,0:21:45.87:0,46,336	0/0:15,0:14:26.86:0,27,204	1/1:7,0:7:2.84:14,3,0	0/1:4,0:4:0:0,0,0	0/0:8,0:8:0.39:0,0,1
chr10	86012913	.	AG	A	693.58	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=4.792;DP=402;FS=12.503;HRun=1;HaplotypeScore=53.8510;InbreedingCoeff=0.6838;MQ=64.56;MQ0=5;MQRankSum=-4.715;QD=10.05;ReadPosRankSum=-1.704;VQSLOD=-0.3823;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:65.80:0,66,737	0/0:7,0:7:16.76:0,17,149	0/0:20,0:10:8.07:0,8,173	0/1:13,0:7:15.20:15,0,16	0/0:30,0:30:64.50:0,64,746	0/0:21,0:21:56.88:0,57,574	0/0:18,0:18:38.90:0,39,440	1/1:2,13:14:41.54:361,42,0	0/0:19,0:18:49.32:0,49,543	0/0:15,0:15:19.58:0,20,249	0/0:18,0:18:34.52:0,35,283	0/0:8,0:8:21.03:0,21,238	0/0:19,0:19:44.56:0,45,513	0/0:9,0:9:23.74:0,24,244	0/0:10,0:10:30.05:0,30,324	0/0:16,0:16:48.09:0,48,549	0/0:17,2:18:0.52:0,1,150	0/0:23,0:22:34.12:0,34,378	1/1:5,0:5:14.93:115,15,0	1/1:13,2:15:26.74:170,27,0	1/1:0,1:1:2.97:20,3,0	0/0:9,0:9:26.95:0,27,283	0/0:14,0:14:35.08:0,35,352	0/0:21,0:21:50.26:0,50,571	0/0:11,0:11:29.91:0,30,340	0/1:5,0:5:19.15:23,0,19	1/1:0,7:7:2.97:20,3,0	1/1:7,1:8:16.96:145,17,0
chr10	86013609	.	GCAT	G	448.71	PASS	AB=0.586;AC=1;AF=0.018;AN=56;BaseQRankSum=4.951;DP=518;FS=2.593;HRun=0;HaplotypeScore=67.4292;InbreedingCoeff=-0.0132;MQ=54.69;MQ0=11;MQRankSum=-2.867;QD=26.39;ReadPosRankSum=1.050;VQSLOD=3.5232;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.27:0,78,1769	0/0:6,0:6:18.06:0,18,415	0/0:5,0:1:3.01:0,3,69	0/0:16,0:5:15.05:0,15,298	0/0:13,0:13:39.13:0,39,896	0/0:19,0:19:54.17:0,54,1180	0/0:40,0:39:93.30:0,93,2117	0/0:30,0:28:84.28:0,84,1861	0/0:18,0:18:54.19:0,54,1236	0/0:26,0:26:75.26:0,75,1711	0/0:12,0:12:30.10:0,30,692	0/0:18,0:18:42.14:0,42,967	0/0:20,0:20:60.21:0,60,1371	0/0:15,0:15:45.15:0,45,1011	0/0:23,0:23:66.23:0,66,1522	0/0:22,0:22:66.23:0,66,1520	0/0:13,0:13:36.12:0,36,830	0/1:5,12:17:20.70:523,0,21	0/0:23,0:22:66.22:0,66,1430	0/0:16,0:16:48.16:0,48,1106	0/0:26,0:26:78.27:0,78,1792	0/0:12,0:12:36.12:0,36,789	0/0:13,0:13:33.11:0,33,759	0/0:22,0:22:66.23:0,66,1516	0/0:14,0:14:42.14:0,42,969	0/0:21,0:21:63.22:0,63,1444	0/0:21,0:21:57.20:0,57,1314	0/0:9,0:9:21.07:0,21,484
chr10	86014705	.	CG	C	4272.28	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.141;DP=557;FS=4.697;HRun=3;HaplotypeScore=65.2324;InbreedingCoeff=0.9890;MQ=57.37;MQ0=13;MQRankSum=0.381;QD=30.96;ReadPosRankSum=-1.756;VQSLOD=3.9199;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,169,2277	0/0:4,0:4:12.04:0,12,167	0/0:18,0:6:14.99:0,15,168	0/0:20,0:8:24.06:0,24,304	0/0:20,0:19:47.77:0,48,591	0/0:17,0:17:51.14:0,51,681	0/0:26,0:26:75.24:0,75,1060	1/1:1,21:21:60.09:685,60,0	0/0:15,0:15:42.13:0,42,585	0/0:24,0:23:66.15:0,66,887	0/0:11,0:11:20.60:0,21,212	0/0:19,0:19:57.18:0,57,799	0/0:16,0:16:42.91:0,43,607	0/0:11,0:11:30.10:0,30,430	0/0:22,0:22:63.20:0,63,885	0/0:13,0:13:39.12:0,39,541	0/0:36,0:36:99:0,108,1529	0/0:24,0:24:63.20:0,63,888	1/1:4,18:21:54.10:624,54,0	1/1:2,13:15:42.10:501,42,0	1/1:3,31:34:71.10:938,71,0	0/0:8,0:8:24.08:0,24,334	0/0:11,0:11:30.10:0,30,421	0/0:26,0:26:75.24:0,75,1060	0/0:20,0:20:57.16:0,57,791	1/1:2,18:20:59.97:676,60,0	1/1:3,15:18:51.09:589,51,0	1/1:0,7:7:21.07:260,21,0
chr10	86015444	.	T	TAA	914.49	PASS	AB=0.958;AC=10;AF=0.179;AN=56;BaseQRankSum=-0.391;DP=380;FS=0.000;HRun=14;HaplotypeScore=55.0150;InbreedingCoeff=0.5936;MQ=69.42;MQ0=3;MQRankSum=-1.699;QD=11.02;ReadPosRankSum=1.425;VQSLOD=1.8001;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:28:24.01:0,24,338	1/1:2,2:6:5.38:48,5,0	0/0:32,0:14:16.80:0,17,100	0/0:17,0:11:6.54:0,7,88	0/1:10,1:11:21.51:22,0,99	0/0:13,0:15:31.16:0,31,280	0/0:2,0:2:5.99:0,6,50	0/0:24,0:22:25.45:0,25,193	0/1:11,0:11:9.16:9,0,185	1/1:9,5:15:15.05:197,15,0	1/1:4,6:14:25.80:280,26,0	0/0:5,0:6:2.89:0,3,67	0/0:6,0:7:11.72:0,12,125	0/0:12,0:13:14.79:0,15,163	0/0:9,0:9:20.17:0,20,157	0/0:9,0:12:5.78:0,6,172	1/1:5,16:25:43.78:517,44,0	0/0:5,0:22:37.94:0,38,161	0/0:16,0:18:17.52:0,18,220	0/0:12,0:12:20.47:0,20,148	0/0:6,0:6:8.88:0,9,75	0/0:5,0:5:5.94:0,6,50	0/0:8,0:9:20.60:0,21,161	0/0:9,0:8:23.97:0,24,201	0/0:12,0:14:15.66:0,16,183	0/0:9,0:9:17.89:0,18,150	0/0:10,0:10:20.87:0,21,175	0/0:16,0:17:24.57:0,25,202
chr10	86015572	.	A	ATAAATAAATAAGTAAG	5198.44	PASS	AB=1.000;AC=16;AF=0.308;AN=52;BaseQRankSum=-1.961;DP=223;FS=2.829;HRun=0;HaplotypeScore=95.1230;InbreedingCoeff=0.6757;MQ=57.41;MQ0=1;MQRankSum=-2.989;QD=42.61;ReadPosRankSum=-1.034;VQSLOD=4.1803;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:48.62:49,0,319	0/0:2,0:2:5.98:0,6,49	./.	0/0:2,0:2:3:0,3,28	0/0:11,0:11:27.08:0,27,539	0/0:10,0:10:30.10:0,30,1069	0/0:10,0:10:28.90:0,29,412	1/1:37,0:35:78.20:1689,78,0	0/0:4,0:4:12.02:0,12,154	0/0:5,0:5:12.04:0,12,365	0/0:8,0:8:21.07:0,21,496	0/0:5,0:5:15.04:0,15,329	./.	0/0:5,0:5:15.03:0,15,242	0/0:4,0:4:9.03:0,9,140	0/0:4,0:4:12.04:0,12,467	0/0:15,0:15:42.14:0,42,1448	0/1:15,0:15:99:231,0,389	1/1:3,8:17:45.12:982,45,0	1/1:1,2:5:14.98:523,15,0	1/1:3,0:3:6.02:100,6,0	0/0:5,0:5:12.03:0,12,193	0/0:2,0:2:6.01:0,6,81	0/0:1,0:1:3.01:0,3,137	0/0:6,0:6:18.06:0,18,473	1/1:11,0:11:27.08:547,27,0	1/1:8,0:8:24.07:439,24,0	1/1:12,0:12:36.12:637,36,0
chr10	86016065	.	G	GA	2387.17	PASS	AB=0.797;AC=21;AF=0.375;AN=56;BaseQRankSum=4.060;DP=509;FS=0.000;HRun=11;HaplotypeScore=78.4694;InbreedingCoeff=0.7345;MQ=57.19;MQ0=11;MQRankSum=-10.624;QD=12.77;ReadPosRankSum=-3.028;VQSLOD=2.8856;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:67.75:0,68,517	1/1:3,4:6:12.02:122,12,0	0/0:17,0:8:20.88:0,21,156	0/0:14,0:10:20.65:0,21,149	0/0:21,0:20:35.43:0,35,278	0/0:21,1:22:16.40:0,16,300	0/0:20,0:16:11.97:0,12,232	1/1:12,20:30:43.27:586,43,0	0/0:16,0:18:33.91:0,34,244	1/1:11,9:20:33.06:331,33,0	1/1:7,8:14:20.88:197,21,0	0/0:15,2:17:5.39:0,5,222	0/1:11,1:12:3.62:4,0,154	0/0:19,0:19:44.78:0,45,348	0/0:19,0:20:49.83:0,50,375	0/0:16,0:16:11.49:0,11,269	1/1:8,12:19:39.04:384,39,0	0/0:15,0:15:8.72:0,9,57	0/1:11,2:13:5.37:108,0,5	1/1:5,8:12:24.81:212,25,0	1/1:10,5:12:14.95:131,15,0	0/0:24,1:25:23.30:0,23,364	0/0:16,0:16:29.75:0,30,223	0/0:29,3:32:22.79:0,23,543	0/0:12,0:12:32.87:0,33,255	0/1:9,10:20:1.61:314,0,2	1/1:5,6:12:0.65:168,1,0	1/1:3,1:2:3.01:30,3,0
chr10	86016084	.	TATTGGA	T	8021.60	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=13.229;DP=475;FS=1.298;HRun=0;HaplotypeScore=112.5604;InbreedingCoeff=0.9742;MQ=74.60;MQ0=0;MQRankSum=-14.319;QD=46.64;ReadPosRankSum=-3.214;VQSLOD=4.2396;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.30:0,87,2969	1/1:1,3:4:9.03:202,9,0	0/0:17,0:17:37.36:0,37,1048	0/0:15,0:15:38.92:0,39,1168	0/0:18,0:18:51.18:0,51,1747	0/0:18,0:18:54.19:0,54,1862	0/0:22,0:22:54.19:0,54,1806	1/1:10,19:29:60.21:1318,60,0	0/0:17,0:17:51.18:0,51,1750	1/1:6,15:21:48.15:1034,48,0	1/1:2,9:11:21.07:472,21,0	0/0:13,0:13:33.11:0,33,1138	0/0:13,0:13:39.13:0,39,1335	0/0:22,0:22:57.20:0,57,1937	0/0:16,0:16:42.14:0,42,1430	0/0:13,0:13:36.12:0,36,1240	1/1:7,10:17:24.08:539,24,0	1/1:2,3:5:9.03:202,9,0	1/1:2,10:12:33.07:645,33,0	1/1:3,13:16:33.11:741,33,0	1/1:3,15:17:25.33:602,25,0	0/0:25,0:25:57.20:0,57,1846	0/0:17,0:17:48.16:0,48,1619	0/0:35,0:35:99:0,102,3372	0/0:9,0:9:27.09:0,27,901	1/1:3,17:20:54.19:1191,54,0	1/1:0,16:16:39.13:875,39,0	1/1:0,3:3:9.03:202,9,0
chr10	86016371	.	C	CA	362.32	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.181;DP=603;FS=2.299;HRun=5;HaplotypeScore=64.9292;InbreedingCoeff=0.9385;MQ=64.27;MQ0=2;MQRankSum=-4.615;QD=22.64;ReadPosRankSum=-0.422;VQSLOD=2.6065;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:29:52.69:0,53,767	0/0:4,0:4:9.02:0,9,97	0/0:35,0:26:59.11:0,59,601	0/0:20,0:16:23.33:0,23,305	0/0:26,0:26:72.15:0,72,764	0/0:22,0:22:66.13:0,66,691	0/0:25,0:25:66.04:0,66,676	0/0:29,0:29:72.16:0,72,762	0/0:13,0:13:36.09:0,36,387	0/0:21,0:21:54.13:0,54,575	0/0:22,0:22:51.10:0,51,539	0/0:19,0:19:51.11:0,51,540	0/0:22,0:22:66.17:0,66,709	0/0:16,0:16:45.11:0,45,484	0/0:21,0:21:54.13:0,54,580	0/0:24,0:24:72.15:0,72,758	0/0:35,0:35:87.21:0,87,935	1/1:3,13:16:21.74:455,22,0	0/0:31,0:31:81.16:0,81,852	0/0:17,0:17:51.11:0,51,534	0/0:21,0:21:60.15:0,60,645	0/0:26,0:26:63.15:0,63,676	0/0:13,0:13:33.08:0,33,355	0/0:27,0:27:81.20:0,81,871	0/0:13,0:13:30.03:0,30,305	0/0:23,0:23:63.15:0,63,676	0/0:20,0:20:57.14:0,57,612	0/0:12,0:12:33.06:0,33,344
chr10	86016381	.	T	TAAAA	662.35	PASS	AB=0.655;AC=1;AF=0.018;AN=56;BaseQRankSum=4.685;DP=619;FS=2.296;HRun=4;HaplotypeScore=102.8604;InbreedingCoeff=0.1598;MQ=64.80;MQ0=1;MQRankSum=-5.982;QD=34.86;ReadPosRankSum=-1.654;VQSLOD=0.1795;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:76.12:0,76,1253	0/0:6,0:6:15.05:0,15,260	0/0:28,0:23:58.67:0,59,902	0/0:21,0:16:36.06:0,36,504	0/0:27,0:27:75.17:0,75,1237	0/0:21,0:21:57.15:0,57,931	0/0:26,0:26:69.20:0,69,1141	0/0:35,0:35:93:0,93,1470	0/0:14,0:14:42.14:0,42,728	0/0:20,0:20:51.14:0,51,853	0/0:20,0:20:53.77:0,54,832	0/0:19,0:19:54.17:0,54,909	0/0:24,0:24:66.17:0,66,1052	0/0:17,0:17:48.15:0,48,805	0/0:22,0:22:66.15:0,66,1004	0/0:28,0:28:78.22:0,78,1266	0/0:32,0:32:96.33:0,96,1664	0/1:9,9:19:9.53:737,0,10	0/0:34,0:34:96.19:0,96,1485	0/0:15,0:15:42.13:0,42,700	0/0:25,0:25:72.19:0,72,1154	0/0:29,0:29:78.21:0,78,1241	0/0:13,0:13:27.06:0,27,406	0/0:27,0:27:75.22:0,75,1238	0/0:10,0:10:30.08:0,30,466	0/0:25,0:25:72.25:0,72,1246	0/0:19,0:18:51.10:0,51,847	0/0:13,0:13:33.06:0,33,502
chr10	86016555	.	T	TA	6897.52	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-12.193;DP=533;FS=2.002;HRun=8;HaplotypeScore=50.2060;InbreedingCoeff=0.9965;MQ=72.66;MQ0=2;MQRankSum=-0.728;QD=26.84;ReadPosRankSum=0.665;VQSLOD=5.4693;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:63.19:727,63,0	1/1:2,8:10:18.05:208,18,0	0/0:14,0:15:32.85:0,33,301	0/0:13,0:11:20.98:0,21,186	0/0:29,0:30:80.06:0,80,719	0/0:25,0:25:69.04:0,69,631	1/1:0,18:18:45.13:518,45,0	1/1:11,20:30:57.09:615,57,0	0/0:11,0:11:33:0,33,297	1/1:5,19:24:57.15:646,57,0	1/1:1,20:21:60.18:692,60,0	0/0:19,0:19:22.33:0,22,381	0/0:12,0:12:36.01:0,36,326	0/0:10,0:10:26.99:0,27,242	0/0:33,0:33:93.03:0,93,848	0/0:22,0:22:57.03:0,57,521	1/1:1,25:26:78.22:889,78,0	0/0:18,0:18:47.99:0,48,433	1/1:3,14:17:42.12:485,42,0	1/1:5,21:26:53.97:561,54,0	1/1:4,13:17:36.11:415,36,0	0/0:17,0:17:39.02:0,39,357	0/0:18,0:18:51.01:0,51,462	0/0:11,0:11:33:0,33,297	0/0:22,0:22:56.03:0,56,494	1/1:3,12:15:36.11:415,36,0	1/1:3,18:21:45.13:519,45,0	1/1:0,7:7:18.05:208,18,0
chr10	86016644	.	C	CG	1014.31	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=4.658;DP=503;FS=10.335;HRun=1;HaplotypeScore=78.1140;InbreedingCoeff=0.9405;MQ=60.95;MQ0=12;MQRankSum=0.380;QD=8.74;ReadPosRankSum=-2.685;VQSLOD=-0.6208;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:78.82:0,79,839	0/0:7,0:7:20.95:0,21,204	0/0:22,0:10:16.49:0,16,132	0/0:18,0:9:14.46:0,14,130	0/0:35,0:35:89.65:0,90,940	0/0:15,0:15:36.07:0,36,407	0/0:16,0:16:35.73:0,36,448	1/1:24,0:23:37.83:245,38,0	0/0:12,0:12:24.02:0,24,239	0/0:16,0:15:36.02:0,36,370	0/0:22,0:22:58.75:0,59,592	0/0:12,0:12:29.67:0,30,340	0/0:11,0:10:27.07:0,27,327	0/0:13,0:13:33.53:0,34,371	0/0:30,0:30:68.38:0,68,778	0/0:18,0:17:48.04:0,48,528	0/0:28,0:28:63.44:0,63,817	1/1:4,3:7:14.98:172,15,0	1/1:16,2:17:17.88:205,18,0	1/1:23,0:23:37.33:220,37,0	1/1:12,0:12:19.64:115,20,0	0/0:19,0:19:51.10:0,51,562	0/0:14,0:14:33.02:0,33,329	0/0:17,0:17:12.80:0,13,369	0/0:14,0:13:32.07:0,32,348	1/1:11,1:12:19.78:154,20,0	1/1:19,1:20:9.60:95,10,0	0/0:8,0:7:0.15:0,0,1
chr10	86016663	.	G	GAA	3151.09	PASS	AB=0.816;AC=16;AF=0.286;AN=56;BaseQRankSum=0.287;DP=550;FS=0.882;HRun=10;HaplotypeScore=84.7518;InbreedingCoeff=0.8101;MQ=65.66;MQ0=5;MQRankSum=-2.319;QD=18.32;ReadPosRankSum=-2.753;VQSLOD=2.1805;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:50.16:0,50,653	0/0:2,0:6:9.71:0,10,45	0/1:22,0:8:8.90:9,0,90	0/0:23,0:15:26.19:0,26,213	0/0:36,0:37:77.75:0,78,784	0/0:21,0:21:54.03:0,54,532	0/0:18,0:19:38.79:0,39,441	1/1:10,17:30:59.57:744,60,0	0/0:9,0:9:21.01:0,21,204	0/0:7,0:19:38.72:0,39,176	0/0:6,0:23:46.50:0,47,197	0/0:16,0:16:39.05:0,39,390	0/0:12,0:11:24.01:0,24,243	0/0:13,0:13:27.01:0,27,269	0/0:26,0:26:42.80:0,43,432	0/0:14,0:13:10.61:0,11,283	0/0:8,0:34:68.72:0,69,314	0/1:5,0:12:14.10:40,0,14	1/1:15,2:18:28.55:348,29,0	1/1:6,16:24:44.05:544,44,0	1/1:5,5:12:26.90:308,27,0	0/0:19,0:21:32.52:0,33,369	0/0:11,0:12:23.77:0,24,296	0/0:15,0:18:19.97:0,20,353	0/0:13,0:12:33.05:0,33,322	1/1:10,8:18:42.11:590,42,0	1/1:11,12:22:49.33:651,49,0	1/1:4,8:11:9.02:116,9,0
chr10	86017240	.	CTCT	C	608.42	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.515;DP=604;FS=2.173;HRun=0;HaplotypeScore=89.4641;InbreedingCoeff=0.9817;MQ=72.90;MQ0=0;MQRankSum=-0.894;QD=33.80;ReadPosRankSum=1.116;VQSLOD=4.2744;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,117,2463	0/0:6,0:6:18.06:0,18,356	0/0:16,0:14:39.04:0,39,627	0/0:19,0:17:20.99:0,21,341	0/0:23,0:23:63.12:0,63,1076	0/0:31,0:31:81.26:0,81,1657	0/0:27,0:27:75.24:0,75,1493	0/0:28,0:28:69.20:0,69,1288	0/0:15,0:15:45.14:0,45,909	0/0:17,0:17:42.13:0,42,813	0/0:21,0:21:57.01:0,57,945	0/0:16,0:16:48.15:0,48,971	0/0:17,0:17:48.13:0,48,929	0/0:20,0:20:57.15:0,57,1119	0/0:29,0:29:84.24:0,84,1654	0/0:15,0:15:33.11:0,33,691	0/0:39,0:39:99:0,117,2313	1/1:1,17:18:45.15:703,45,0	0/0:25,0:25:72.17:0,72,1277	0/0:23,0:23:57.09:0,57,1120	0/0:28,0:28:66.18:0,66,1254	0/0:33,0:33:93.07:0,93,1665	0/0:15,0:15:42.08:0,42,711	0/0:24,0:24:69.21:0,69,1411	0/0:7,0:7:21.06:0,21,375	0/0:17,0:17:48.16:0,48,935	0/0:22,0:21:60.15:0,60,1158	0/0:9,0:9:24.06:0,24,465
chr10	86017329	.	A	ACCCC	932.13	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.695;DP=619;FS=0.000;HRun=6;HaplotypeScore=114.7368;InbreedingCoeff=0.9896;MQ=64.27;MQ0=4;MQRankSum=-1.205;QD=46.61;ReadPosRankSum=-1.027;VQSLOD=1.8322;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:93.22:0,93,1418	0/0:12,0:12:36.11:0,36,550	0/0:14,0:12:33.06:0,33,450	0/0:14,0:9:24.94:0,25,322	0/0:21,0:21:33.05:0,33,500	0/0:21,0:21:48.13:0,48,766	0/0:21,0:21:48.15:0,48,769	0/0:21,0:20:45.11:0,45,669	0/0:16,0:16:48.15:0,48,754	0/0:25,0:25:63.18:0,63,982	0/0:19,0:19:51.16:0,51,813	0/0:20,0:20:54.17:0,54,873	0/0:20,0:20:54.17:0,54,872	0/0:22,0:22:63.21:0,63,1019	0/0:20,0:20:51.17:0,51,824	0/0:28,0:28:78.22:0,78,1233	0/0:41,0:41:99:0,105,1673	1/1:6,10:19:51.13:1027,51,0	0/0:20,0:19:42.11:0,42,680	0/0:17,0:17:36.03:0,36,536	0/0:44,0:44:99:0,105,1615	0/0:19,0:19:45.13:0,45,715	0/0:18,0:18:44.72:0,45,681	0/0:33,0:33:81.27:0,81,1308	0/0:7,0:7:18.05:0,18,280	0/0:26,0:26:60.16:0,60,965	0/0:23,0:23:63.17:0,63,968	0/0:18,0:18:51.15:0,51,799
chr10	86017745	.	G	GA	1606	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.226;DP=592;FS=7.445;HRun=10;HaplotypeScore=75.8885;InbreedingCoeff=0.7655;MQ=61.73;MQ0=7;MQRankSum=0.704;QD=18.04;ReadPosRankSum=-2.316;VQSLOD=3.3595;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,46:66:73.68:1151,74,0	0/0:11,0:11:26.96:0,27,221	0/0:10,0:7:7.88:0,8,115	0/0:11,0:4:5.97:0,6,49	0/0:30,1:31:5.17:0,5,555	0/0:17,2:20:17.98:0,18,340	1/1:3,20:23:54.14:576,54,0	0/0:32,2:32:3.94:0,4,430	0/0:14,0:14:38.93:0,39,317	0/0:25,0:25:59.90:0,60,490	0/0:16,0:17:19.97:0,20,154	0/0:23,0:23:59.93:0,60,493	0/0:18,0:18:12.03:0,12,253	0/0:15,0:14:29.94:0,30,243	0/0:27,0:27:68.91:0,69,566	0/0:16,0:16:41.92:0,42,341	0/0:29,0:29:71.80:0,72,580	0/0:21,0:21:31.18:0,31,368	0/0:21,1:22:18.16:0,18,337	0/0:24,0:24:50.88:0,51,418	0/0:12,0:12:23.72:0,24,184	0/0:12,0:12:32.96:0,33,271	0/0:25,0:25:62.89:0,63,513	0/0:12,0:12:29.97:0,30,246	0/0:20,0:20:38.92:0,39,320	0/0:21,0:21:56.93:0,57,468	0/0:25,1:26:36.93:0,37,510	0/0:6,0:6:8.99:0,9,74
chr10	86018066	.	GTT	G	536.89	PASS	AB=0.800;AC=8;AF=0.143;AN=56;BaseQRankSum=0.329;DP=407;FS=25.303;HRun=16;HaplotypeScore=61.5058;InbreedingCoeff=0.5524;MQ=68.34;MQ0=6;MQRankSum=1.133;QD=9.42;ReadPosRankSum=4.851;VQSLOD=0.4637;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:35:81:0,81,776	1/1:3,2:5:5.94:50,6,0	0/0:32,0:12:9.10:0,9,64	0/0:26,0:13:3.37:0,3,53	0/0:21,0:23:63.70:0,64,670	0/0:9,0:9:26.95:0,27,260	0/0:13,0:17:38.26:0,38,329	0/0:12,0:14:20.41:0,20,214	0/0:6,0:7:17.33:0,17,140	1/1:6,11:17:38.86:321,39,0	0/1:4,3:7:43.12:57,0,43	0/0:7,0:7:14.98:0,15,149	0/1:5,1:9:10.09:10,0,72	0/0:11,0:13:23.41:0,23,256	0/0:8,0:8:15.02:0,15,159	0/0:9,0:11:22.78:0,23,237	1/1:7,11:19:29.71:242,30,0	0/0:12,0:12:23.99:0,24,221	0/0:19,0:20:43.75:0,44,438	0/0:12,0:12:21:0,21,219	0/0:14,0:16:8.95:0,9,67	0/0:3,0:3:6.02:0,6,79	0/0:3,0:3:6:0,6,54	0/0:20,0:22:49.80:0,50,490	0/0:14,0:14:25.75:0,26,234	0/0:17,0:18:39.43:0,39,368	0/0:16,0:17:38.32:0,38,359	0/0:4,0:4:6.02:0,6,79
chr10	86018082	.	T	TTC	290.02	PASS	AB=0.987;AC=4;AF=0.071;AN=56;BaseQRankSum=3.238;DP=450;FS=0.000;HRun=0;HaplotypeScore=77.7460;InbreedingCoeff=0.4010;MQ=68.23;MQ0=13;MQRankSum=-1.674;QD=3.30;ReadPosRankSum=0.240;VQSLOD=1.1268;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:36:48.12:48,0,231	0/0:5,0:5:14.84:0,15,109	0/0:55,0:19:40.56:0,41,302	0/1:37,0:14:3.39:3,0,108	0/0:29,0:29:70.17:0,70,645	0/0:9,0:9:26.97:0,27,250	0/0:13,0:13:15.93:0,16,210	0/0:17,0:16:41.60:0,42,325	0/0:7,0:7:20.81:0,21,170	0/0:20,0:20:54.91:0,55,425	0/0:7,0:7:20.41:0,20,139	0/0:7,0:7:17.51:0,18,151	0/0:9,0:9:17.47:0,17,123	0/0:11,0:11:23.54:0,24,219	0/0:10,0:9:13.83:0,14,147	0/0:8,0:8:24.02:0,24,245	0/0:32,0:32:92.38:0,92,695	1/1:8,4:14:31.45:346,31,0	0/0:24,0:22:64.69:0,65,587	0/0:11,0:11:18.43:0,18,174	0/0:9,0:9:11.91:0,12,88	0/0:3,0:3:9.02:0,9,98	0/0:3,0:2:5.83:0,6,39	0/0:23,0:22:59.91:0,60,504	0/0:11,0:12:17.59:0,18,234	0/0:18,0:18:40.92:0,41,386	0/0:17,0:17:37:0,37,330	0/0:3,0:3:6.02:0,6,70
chr10	86018088	.	C	CT	1526.78	PASS	AB=0.812;AC=18;AF=0.333;AN=54;BaseQRankSum=-4.698;DP=454;FS=1.270;HRun=14;HaplotypeScore=65.4564;InbreedingCoeff=-0.0412;MQ=65.79;MQ0=15;MQRankSum=-0.619;QD=5.57;ReadPosRankSum=-0.533;VQSLOD=2.1637;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,13:39:39.43:258,0,39	0/0:4,0:4:5.90:0,6,38	0/0:52,0:16:18.64:0,19,145	0/0:36,0:14:10.63:0,11,62	0/1:23,3:29:9.33:9,0,172	0/0:9,0:9:17.67:0,18,115	0/1:8,4:12:4.27:91,0,4	0/1:10,8:18:1.23:102,0,1	0/1:5,1:7:30.31:36,0,30	0/1:15,5:21:1.28:133,0,1	0/1:6,1:8:23.38:50,0,23	0/0:8,0:9:10.71:0,11,62	0/1:8,0:8:17.62:18,0,29	0/0:9,0:9:4.10:0,4,21	0/0:11,0:10:13.77:0,14,82	0/0:8,0:8:8.72:0,9,55	0/1:19,16:34:14.10:369,0,14	0/0:9,0:14:12.42:0,12,35	0/1:14,10:23:24.99:153,0,25	0/1:6,4:10:3.24:90,0,3	1/1:3,5:9:5.80:33,6,0	0/0:4,0:3:2.84:0,3,19	./.	0/0:22,0:21:34.36:0,34,226	0/1:14,0:14:12.56:13,0,108	1/1:5,10:18:0.03:207,0,0	0/1:10,6:16:1.62:112,0,2	0/1:4,0:4:0:0,0,0
chr10	86018201	.	TAGTACTAA	T	4583.53	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=10.404;DP=341;FS=0.522;HRun=0;HaplotypeScore=88.4857;InbreedingCoeff=0.9741;MQ=89.58;MQ0=0;MQRankSum=-8.969;QD=59.53;ReadPosRankSum=-0.411;VQSLOD=4.6106;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.21:0,60,2614	0/0:6,0:6:18.06:0,18,805	0/0:15,0:15:16.06:0,16,1430	0/0:18,0:16:45.15:0,45,1461	0/0:9,0:9:27.09:0,27,1206	0/0:10,0:10:30.10:0,30,1342	0/0:11,0:11:33.11:0,33,1365	1/1:2,17:19:51.13:1195,51,0	0/0:13,0:13:39.13:0,39,1560	0/0:14,0:14:42.14:0,42,1713	0/0:16,0:16:48.16:0,48,2068	0/0:16,0:16:45.15:0,45,1734	0/0:6,0:6:18.06:0,18,760	0/0:13,0:13:33.11:0,33,1361	0/0:6,0:6:18.06:0,18,762	0/0:15,0:15:42.14:0,42,1853	0/0:33,0:33:96.33:0,96,4142	0/0:21,0:21:57.20:0,57,2457	1/1:3,10:13:30.10:821,30,0	1/1:0,5:5:15.05:429,15,0	1/1:0,9:9:18.06:456,18,0	0/0:6,0:6:18.04:0,18,639	./.	0/0:8,0:8:24.08:0,24,1071	0/0:7,0:7:21.07:0,21,929	1/1:2,12:14:33.09:824,33,0	1/1:0,12:12:21.07:601,21,0	1/1:0,5:5:9.03:258,9,0
chr10	86019350	.	AAAAG	A	6892.64	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.376;DP=614;FS=8.692;HRun=0;HaplotypeScore=101.7879;InbreedingCoeff=0.9995;MQ=85.11;MQ0=0;MQRankSum=-6.259;QD=46.26;ReadPosRankSum=-1.062;VQSLOD=5.0578;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:93.29:0,93,2260	0/0:13,0:13:36.12:0,36,935	0/0:28,0:28:69.19:0,69,1473	0/0:14,0:14:33.11:0,33,758	0/0:38,0:38:99:0,108,2777	0/0:20,0:20:60.21:0,60,1558	0/0:14,0:14:36.12:0,36,935	1/1:6,31:37:93.30:1635,93,0	0/0:21,0:21:60.21:0,60,1512	0/0:21,0:21:50.76:0,51,1194	0/0:25,0:25:72.25:0,72,1848	0/0:24,0:24:72.25:0,72,1815	0/0:16,0:16:45.15:0,45,1160	0/0:18,0:18:54.17:0,54,1348	0/0:19,0:19:57.20:0,57,1459	0/0:23,0:23:66.21:0,66,1581	0/0:27,0:27:75.26:0,75,1908	0/0:22,0:22:63.19:0,63,1507	1/1:2,17:19:51.13:857,51,0	1/1:3,22:24:63.15:1069,63,0	1/1:2,9:11:24.08:418,24,0	0/0:26,0:26:72.25:0,72,1842	0/0:23,0:23:57.20:0,57,1426	0/0:18,0:18:48.16:0,48,1235	0/0:20,0:20:57.20:0,57,1473	1/1:2,19:21:60.17:1022,60,0	1/1:0,20:20:57.20:1026,57,0	1/1:0,16:16:48.16:865,48,0
chr10	86020181	.	CA	C	500.29	PASS	AB=0.967;AC=16;AF=0.286;AN=56;BaseQRankSum=-0.444;DP=437;FS=9.312;HRun=8;HaplotypeScore=66.9032;InbreedingCoeff=0.5967;MQ=84.54;MQ0=2;MQRankSum=1.424;QD=3.76;ReadPosRankSum=-0.674;VQSLOD=-0.4706;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:53.81:0,54,465	1/1:6,0:6:11.47:71,11,0	0/0:39,0:21:22.43:0,22,220	0/0:25,1:19:1.19:0,1,225	0/0:18,0:18:39.02:0,39,393	0/0:14,0:14:36.06:0,36,389	0/0:9,0:9:20.03:0,20,160	1/1:15,1:16:6.80:144,7,0	0/0:12,0:12:30.06:0,30,329	0/1:15,0:15:7.74:8,0,11	1/1:10,0:10:5.69:35,6,0	0/0:15,0:15:32.91:0,33,330	0/0:8,0:8:15.93:0,16,189	0/0:16,0:16:45.09:0,45,499	0/0:21,0:20:48.93:0,49,488	0/0:16,0:16:32.55:0,33,272	1/1:26,0:26:1.89:64,2,0	0/0:14,0:14:21.70:0,22,67	1/1:12,1:13:18.21:165,18,0	0/1:14,1:15:0.24:62,0,0	0/0:12,0:12:14.66:0,15,43	0/0:10,0:10:18.46:0,18,191	0/0:15,0:15:18.92:0,19,197	0/0:20,0:20:30.03:0,30,351	0/0:11,0:11:23.99:0,24,235	1/1:11,0:11:8.28:76,8,0	0/1:12,1:13:6.51:25,0,7	0/1:8,0:8:15.98:23,0,16
chr10	86020188	.	A	AG	261.51	PASS	AB=0.930;AC=11;AF=0.196;AN=56;BaseQRankSum=3.184;DP=444;FS=14.429;HRun=0;HaplotypeScore=67.3900;InbreedingCoeff=0.3515;MQ=82.37;MQ0=2;MQRankSum=-0.416;QD=2.44;ReadPosRankSum=-1.318;VQSLOD=0.3069;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:53.87:0,54,563	1/1:3,5:8:5.94:64,6,0	0/0:42,0:22:37.67:0,38,393	0/0:25,0:17:28.38:0,28,256	0/0:19,0:19:44.92:0,45,518	0/0:16,0:16:42.06:0,42,544	0/0:14,0:14:3.36:0,3,170	0/1:15,0:15:4.04:4,0,83	0/0:13,0:13:36.08:0,36,436	1/1:3,10:13:3.06:88,3,0	1/1:7,1:8:8.95:75,9,0	0/0:13,0:13:35.61:0,36,392	0/1:9,0:9:0.30:0,0,242	0/0:17,0:17:48.05:0,48,576	0/0:21,0:20:48.91:0,49,598	0/0:16,0:16:32.82:0,33,312	0/1:13,15:28:51.12:150,0,51	0/0:13,1:14:26.68:0,27,162	0/1:12,0:12:9.25:9,0,48	0/0:15,0:15:0.63:0,1,90	0/0:12,0:12:8.31:0,8,109	0/0:8,0:8:24.07:0,24,315	0/0:12,0:12:29.89:0,30,333	0/0:17,0:17:51.12:0,51,627	0/0:13,0:13:35.92:0,36,367	0/0:10,0:10:13.88:0,14,72	0/1:14,0:14:1.88:2,0,67	0/0:8,0:8:18.93:0,19,105
chr10	86020433	.	C	CG	1889.86	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-1.879;DP=504;FS=4.733;HRun=4;HaplotypeScore=79.9430;InbreedingCoeff=0.8835;MQ=64.11;MQ0=11;MQRankSum=-2.184;QD=14.43;ReadPosRankSum=-2.957;VQSLOD=2.2884;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:56.91:0,57,479	0/0:13,0:13:32.99:0,33,292	0/0:29,1:14:7.37:0,7,77	0/0:24,0:10:7.50:0,7,84	0/0:26,0:26:57.67:0,58,543	0/0:15,0:14:29.98:0,30,297	0/0:15,0:15:41.82:0,42,346	1/1:5,16:21:50.06:442,50,0	0/0:11,0:11:30.03:0,30,295	0/0:32,0:32:80.84:0,81,683	0/0:12,0:12:20.83:0,21,160	0/0:18,0:18:32.88:0,33,288	0/0:8,0:8:17.61:0,18,161	0/0:9,0:9:14.87:0,15,125	0/0:16,0:16:41.67:0,42,421	0/0:16,0:15:38.22:0,38,398	0/0:31,0:32:82.93:0,83,672	0/1:2,0:3:1.42:16,0,1	1/1:14,3:17:29.65:285,30,0	1/1:2,12:14:6.02:80,6,0	1/1:5,14:19:23.65:320,24,0	0/0:12,0:12:24.05:0,24,256	0/0:18,0:18:22.73:0,23,268	0/0:15,0:15:33.06:0,33,347	0/0:19,0:19:29.76:0,30,264	1/1:11,9:20:23.58:484,24,0	1/1:9,16:24:28.97:369,29,0	1/1:4,7:8:7.84:86,8,0
chr10	86020437	.	GA	G	1047.89	PASS	AB=0.889;AC=14;AF=0.250;AN=56;BaseQRankSum=0.969;DP=529;FS=10.823;HRun=15;HaplotypeScore=76.5328;InbreedingCoeff=0.5859;MQ=65.34;MQ0=12;MQRankSum=2.016;QD=6.47;ReadPosRankSum=1.938;VQSLOD=1.8683;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,19:29:15.83:199,16,0	1/1:4,9:13:0.27:127,0,0	0/0:39,1:16:5.81:0,6,147	0/0:31,0:12:18.48:0,18,91	0/0:22,2:27:3.16:0,3,249	0/0:14,0:13:6.06:0,6,157	1/1:5,10:15:6.10:162,6,0	0/0:21,0:22:34.75:0,35,233	0/1:13,2:14:10.68:11,0,151	1/1:9,19:30:34.72:315,35,0	1/1:4,5:9:11.74:76,12,0	0/0:18,0:18:32.88:0,33,266	0/0:7,0:7:9:0,9,79	0/0:8,0:8:14.94:0,15,121	0/0:17,1:18:25.70:0,26,340	0/0:19,0:19:16.72:0,17,269	1/1:11,17:32:53.65:315,54,0	0/0:2,0:2:0:0,0,0	0/0:21,0:20:10.24:0,10,154	0/0:15,0:15:6.47:0,6,120	0/0:15,0:15:24.48:0,24,147	0/0:12,0:12:5.85:0,6,164	0/0:17,1:20:7.50:0,7,258	0/0:15,2:17:29.98:0,30,259	0/1:14,2:17:11.71:12,0,137	0/0:20,1:21:11.77:0,12,229	0/0:27,1:27:27.43:0,27,284	0/0:11,0:8:8.79:0,9,52
chr10	86021010	.	A	AACAC	2286.11	PASS	AB=0.773;AC=26;AF=0.500;AN=52;BaseQRankSum=1.333;DP=640;FS=0.000;HRun=0;HaplotypeScore=134.4640;InbreedingCoeff=0.5637;MQ=65.59;MQ0=4;MQRankSum=-0.582;QD=6.20;ReadPosRankSum=-1.641;VQSLOD=1.9292;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:34:5.55:78,6,0	1/1:3,0:10:10.98:49,11,0	./.	./.	0/0:23,0:27:21.16:0,21,554	0/1:19,0:21:8.75:9,0,168	1/1:25,0:24:8.70:167,9,0	1/1:23,0:24:18.58:187,19,0	0/0:14,0:14:9.01:0,9,121	1/1:13,0:21:1.04:202,1,0	0/1:8,0:11:16.04:16,0,39	0/0:19,0:19:26.83:0,27,333	0/0:11,0:14:21.03:0,21,261	0/0:20,0:20:24.41:0,24,366	0/0:21,0:21:30.08:0,30,432	0/0:11,0:11:18.04:0,18,241	0/1:13,0:31:23.08:79,0,23	0/1:15,0:27:79.36:79,0,89	1/1:12,2:16:8.97:116,9,0	1/1:15,0:20:2.74:12,3,0	1/1:35,19:72:22.81:330,23,0	0/0:25,0:25:30.07:0,30,403	0/0:18,0:18:18.05:0,18,281	0/0:31,0:36:52.66:0,53,682	0/0:14,0:18:27.07:0,27,362	1/1:24,3:29:55.54:830,56,0	1/1:12,2:18:6.02:118,6,0	1/1:3,4:8:9.03:202,9,0
chr10	86021047	.	A	ACACA	1888.82	PASS	AB=1.000;AC=24;AF=0.462;AN=52;BaseQRankSum=0.354;DP=647;FS=0.000;HRun=0;HaplotypeScore=115.2595;InbreedingCoeff=0.5765;MQ=62.24;MQ0=6;MQRankSum=-0.001;QD=6.00;ReadPosRankSum=-3.502;VQSLOD=1.4929;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:5.41:78,5,0	1/1:10,0:10:10.98:49,11,0	./.	./.	0/0:29,0:29:21.16:0,21,554	0/0:15,0:15:4.90:0,5,176	1/1:21,0:20:6.18:117,6,0	1/1:21,0:21:12.62:78,13,0	0/0:24,0:24:9.01:0,9,121	0/1:25,0:25:1.06:181,0,1	0/1:17,0:17:16.05:16,0,39	0/0:21,0:21:26.83:0,27,333	0/0:23,0:23:20.62:0,21,261	0/0:26,0:26:23.93:0,24,365	0/0:28,0:28:27.07:0,27,399	0/0:24,0:24:18.04:0,18,241	0/1:32,0:31:23.08:79,0,23	0/1:26,0:25:58:58,0,93	1/1:12,0:12:6.89:98,7,0	1/1:13,0:13:2.74:12,3,0	1/1:52,0:52:22.80:331,23,0	0/0:22,0:22:30.07:0,30,403	0/0:22,0:22:18.05:0,18,281	0/0:32,0:32:51.10:0,51,678	0/0:26,0:26:26.99:0,27,362	1/1:23,5:30:44.75:746,45,0	1/1:8,0:8:3.01:71,3,0	1/1:18,0:18:8.96:160,9,0
chr10	86022615	.	AT	A	2561.58	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.843;DP=618;FS=10.685;HRun=7;HaplotypeScore=59.8764;InbreedingCoeff=0.9834;MQ=73.34;MQ0=0;MQRankSum=-0.499;QD=25.62;ReadPosRankSum=1.596;VQSLOD=3.8482;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1292	1/1:1,18:19:54.12:551,54,0	0/0:13,0:13:17.24:0,17,222	0/0:12,0:12:10.83:0,11,205	0/0:41,0:41:99:0,114,1382	0/0:20,0:20:57.18:0,57,717	0/0:14,0:14:42.10:0,42,500	0/0:37,0:37:90.27:0,90,1109	0/0:14,0:14:42.12:0,42,506	1/1:2,24:26:75.17:763,75,0	1/1:1,23:24:63.14:643,63,0	0/0:19,0:19:57.17:0,57,703	0/0:11,0:11:33.09:0,33,401	0/0:20,0:20:60.16:0,60,727	0/0:15,0:15:36.12:0,36,453	0/0:19,0:19:54.17:0,54,668	1/1:5,26:31:75.16:765,75,0	0/0:25,0:25:60.15:0,60,737	0/0:24,0:24:54.16:0,54,667	0/0:35,0:35:99:0,105,1307	0/0:10,0:10:24.07:0,24,290	0/0:16,0:16:42.13:0,42,526	0/0:30,0:30:81.23:0,81,991	0/0:6,0:6:18.06:0,18,226	0/0:21,0:21:63.19:0,63,779	0/0:27,1:28:50.63:0,51,939	0/0:30,0:29:87.27:0,87,1081	0/0:21,0:21:63.15:0,63,751
chr10	86023129	.	GA	G	280.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.578;DP=523;FS=2.467;HRun=11;HaplotypeScore=52.1502;InbreedingCoeff=0.5575;MQ=61.96;MQ0=23;MQRankSum=-1.424;QD=12.73;ReadPosRankSum=1.435;VQSLOD=3.3969;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:95.86:0,96,967	0/0:8,0:8:15.04:0,15,159	0/0:12,0:9:19.75:0,20,220	0/0:7,0:6:2.79:0,3,73	0/0:21,0:19:45.11:0,45,473	0/0:18,1:19:29.32:0,29,497	0/0:25,0:22:58.70:0,59,608	0/0:30,1:29:50.31:0,50,688	0/0:21,0:20:54.13:0,54,571	0/0:12,0:12:21.05:0,21,223	0/0:12,0:11:21.03:0,21,212	0/0:19,0:18:42.10:0,42,440	0/0:14,0:13:32.67:0,33,324	0/0:10,0:10:24.01:0,24,237	0/0:14,0:13:27.03:0,27,275	0/0:12,1:13:2.42:0,2,224	0/0:31,0:29:78:0,78,801	1/1:4,18:20:46.76:374,47,0	0/0:19,2:21:4.72:0,5,442	0/0:22,0:21:47.95:0,48,481	0/0:25,3:29:4.09:0,4,643	0/0:8,0:8:24.06:0,24,254	0/0:14,0:14:33.06:0,33,342	0/0:29,0:28:75.19:0,75,800	0/0:15,1:16:17.46:0,17,391	0/0:32,0:30:56.58:0,57,798	0/0:14,2:15:14.44:0,14,350	0/0:7,0:4:12:0,12,113
chr10	86023454	.	G	GT	11555.42	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-6.864;DP=533;FS=5.153;HRun=0;HaplotypeScore=55.9243;InbreedingCoeff=0.9992;MQ=79.71;MQ0=0;MQRankSum=-2.565;QD=41.42;ReadPosRankSum=-0.872;VQSLOD=4.9310;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,25:32:93.29:1427,93,0	1/1:0,8:8:24.08:383,24,0	0/0:11,0:11:24.03:0,24,302	0/0:17,0:17:43:0,43,589	0/0:22,0:22:63.19:0,63,861	0/0:17,0:17:51.17:0,51,712	1/1:1,11:12:33.06:489,33,0	1/1:1,32:33:96.29:1479,96,0	0/0:21,0:21:63.21:0,63,881	1/1:0,27:27:75.24:1176,75,0	1/1:1,14:15:30.10:479,30,0	0/0:10,0:10:30.10:0,30,419	0/0:17,0:17:51.17:0,51,713	0/0:21,0:21:57.19:0,57,796	0/0:22,0:22:66.15:0,66,899	0/0:16,0:16:48.16:0,48,671	1/1:0,25:26:75.26:1191,75,0	1/1:1,13:14:36.12:575,36,0	1/1:0,14:14:42.14:666,42,0	1/1:1,21:22:42.14:671,42,0	1/1:1,19:20:36.12:575,36,0	0/0:17,0:17:51.15:0,51,681	0/0:14,0:14:42.12:0,42,554	0/0:29,0:29:78.25:0,78,1068	0/0:20,0:20:60.18:0,60,807	1/1:1,17:18:51.14:766,51,0	1/1:0,24:24:66.23:1055,66,0	1/1:0,14:14:39.13:623,39,0
chr10	86023501	.	G	GT	1607.85	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.470;DP=603;FS=4.878;HRun=9;HaplotypeScore=96.1942;InbreedingCoeff=0.9956;MQ=74.64;MQ0=0;MQRankSum=-1.450;QD=22.03;ReadPosRankSum=-1.623;VQSLOD=3.3863;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,33:43:94.03:980,94,0	0/0:16,0:16:38.98:0,39,339	0/0:13,0:13:26.91:0,27,220	0/0:15,0:15:36.28:0,36,295	0/0:18,0:18:30.01:0,30,220	0/0:22,0:22:27.51:0,28,401	1/1:3,12:15:39.03:405,39,0	0/0:31,0:31:77.97:0,78,673	0/0:18,0:18:50.97:0,51,438	0/0:24,0:24:21.32:0,21,409	0/0:15,0:15:41.98:0,42,361	0/0:20,0:20:50.95:0,51,438	0/0:17,0:17:47.88:0,48,403	0/0:18,0:18:50.96:0,51,435	0/0:23,0:23:62.98:0,63,547	0/0:21,0:21:56.96:0,57,490	0/0:30,0:30:83.97:0,84,728	1/1:4,11:15:33.09:365,33,0	0/0:23,0:23:56.97:0,57,493	0/0:18,0:18:41.89:0,42,354	0/0:33,0:33:86.92:0,87,744	0/0:21,0:21:50.97:0,51,442	0/0:13,0:13:19.78:0,20,161	0/0:32,0:32:89.94:0,90,774	0/0:26,0:26:62.92:0,63,539	0/0:22,0:22:53.91:0,54,460	0/0:24,0:24:62.96:0,63,543	0/0:17,0:17:41.99:0,42,365
chr10	86024577	.	A	ATT	654.28	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=1.064;DP=552;FS=4.170;HRun=9;HaplotypeScore=86.6833;InbreedingCoeff=0.6792;MQ=77.24;MQ0=0;MQRankSum=0.038;QD=19.83;ReadPosRankSum=0.324;VQSLOD=2.5686;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.15:0,63,671	0/0:12,0:12:30.04:0,30,309	0/0:17,0:17:38.86:0,39,385	0/1:12,0:12:8.02:8,0,168	0/0:32,0:32:81.17:0,81,853	0/0:23,0:23:66.10:0,66,681	0/0:18,0:18:50.33:0,50,517	0/0:25,0:25:54.10:0,54,562	0/0:16,0:16:39.09:0,39,415	0/0:28,0:28:63.12:0,63,670	0/0:21,0:22:48.07:0,48,566	0/0:20,0:20:37.47:0,37,584	0/0:10,0:10:30.08:0,30,319	0/0:13,0:13:33.06:0,33,351	0/0:23,0:23:57.12:0,57,606	0/0:9,0:9:24.06:0,24,255	0/0:31,0:31:87.21:0,87,925	1/1:2,18:21:50.66:747,51,0	0/0:19,0:19:51.11:0,51,537	0/0:22,0:22:57.13:0,57,607	0/0:25,0:25:66.16:0,66,702	0/0:13,0:14:27.01:0,27,343	0/0:23,0:23:54.13:0,54,575	0/0:11,0:11:33.08:0,33,351	0/0:23,0:23:54.11:0,54,574	0/0:23,0:23:60.12:0,60,638	0/0:25,0:25:54.08:0,54,575	0/0:13,0:13:27.06:0,27,287
chr10	86025866	.	GCGGC	G	567.32	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.504;DP=393;FS=0.000;HRun=0;HaplotypeScore=69.9063;InbreedingCoeff=0.8776;MQ=78.41;MQ0=0;MQRankSum=-2.840;QD=33.37;ReadPosRankSum=-0.235;VQSLOD=3.2391;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.24:0,72,1847	0/0:7,0:7:14.98:0,15,395	0/0:6,0:6:6.02:0,6,142	0/0:15,0:15:38.62:0,39,660	0/0:11,0:11:27.09:0,27,708	0/0:13,0:13:39.13:0,39,1017	0/0:20,0:20:54.19:0,54,1425	0/0:20,0:20:48.12:0,48,1206	0/0:12,0:12:30.10:0,30,791	0/0:11,0:11:33.06:0,33,704	0/0:14,0:14:39.13:0,39,996	0/0:12,0:12:33.10:0,33,817	0/0:10,0:10:30.10:0,30,792	0/0:11,0:11:21.07:0,21,551	0/0:20,0:19:57.20:0,57,1492	0/0:12,0:12:30.10:0,30,792	0/0:21,0:21:60.21:0,60,1581	1/1:3,14:17:36.12:662,36,0	0/0:11,0:11:24.08:0,24,607	0/0:20,0:20:54.18:0,54,1362	0/0:20,0:20:57.20:0,57,1504	0/0:11,0:11:33.11:0,33,866	0/0:13,0:13:39.08:0,39,943	0/0:20,0:20:57.20:0,57,1487	0/0:8,0:8:21.07:0,21,554	0/0:13,0:13:39.13:0,39,1028	0/0:8,0:8:21.07:0,21,552	0/0:10,0:10:30.10:0,30,792
chr10	86026236	.	CA	C	3728.21	PASS	AB=0.980;AC=20;AF=0.357;AN=56;BaseQRankSum=11.127;DP=562;FS=0.743;HRun=11;HaplotypeScore=74.5787;InbreedingCoeff=0.8620;MQ=66.95;MQ0=5;MQRankSum=-2.497;QD=14.85;ReadPosRankSum=-1.188;VQSLOD=3.8078;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:77.91:640,78,0	0/0:9,0:9:24.06:0,24,255	0/1:32,0:20:19.88:20,0,202	0/1:23,1:16:0.79:1,0,151	0/0:28,0:29:77.82:0,78,783	0/0:23,0:23:60.15:0,60,640	1/1:3,12:16:37.99:301,38,0	1/1:4,27:32:74.30:626,74,0	0/0:15,0:15:42.11:0,42,448	0/0:18,0:18:29.41:0,29,503	0/0:17,1:18:20.47:0,20,423	0/0:20,0:20:50.96:0,51,525	0/0:20,0:20:54.14:0,54,575	0/0:15,1:16:11.45:0,11,327	0/0:23,1:24:38.51:0,39,608	0/0:17,0:17:39.10:0,39,416	0/0:21,0:21:57.10:0,57,589	0/0:5,0:18:30.57:0,31,152	1/1:5,12:18:8.89:252,9,0	1/1:1,25:26:74.91:615,75,0	1/1:1,6:7:17.98:148,18,0	0/0:9,0:9:24.05:0,24,248	0/0:6,0:18:32:0,32,174	0/0:1,0:15:34.19:0,34,172	0/0:18,1:20:29.48:0,29,511	1/1:5,19:24:53.90:439,54,0	1/1:7,16:23:47.91:390,48,0	1/1:5,12:17:35.93:296,36,0
chr10	86027608	.	ATT	A	2374.33	PASS	AB=0.548;AC=13;AF=0.232;AN=56;BaseQRankSum=3.956;DP=384;FS=6.886;HRun=12;HaplotypeScore=54.2227;InbreedingCoeff=0.8049;MQ=74.97;MQ0=0;MQRankSum=-0.567;QD=19.62;ReadPosRankSum=0.667;VQSLOD=2.3753;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:20:34.43:0,34,349	0/0:3,0:3:6.02:0,6,89	0/0:10,0:7:6.18:0,6,33	0/0:15,0:13:18.32:0,18,109	0/0:28,0:28:57.66:0,58,828	0/0:10,0:12:32.06:0,32,398	0/0:5,0:19:36.02:0,36,333	1/1:7,17:25:56.76:547,57,0	0/0:7,0:7:15.05:0,15,224	0/0:7,0:7:21.06:0,21,297	0/0:17,0:19:38.09:0,38,486	0/0:8,0:10:26.57:0,27,350	0/0:8,0:9:24.05:0,24,304	0/0:8,0:9:23.51:0,24,279	0/0:8,0:8:21.06:0,21,293	0/0:8,0:10:21.02:0,21,272	0/0:19,0:20:50.62:0,51,694	0/0:16,0:16:48.14:0,48,675	1/1:4,12:16:33.03:335,33,0	1/1:1,5:7:8.73:143,9,0	1/1:5,7:12:0.79:190,1,0	0/0:5,0:6:17.55:0,18,232	0/0:10,0:10:27.08:0,27,378	0/0:11,0:12:27.04:0,27,362	0/0:11,0:13:30.08:0,30,413	0/1:3,12:17:8.72:333,0,9	1/1:8,17:25:57.06:573,57,0	1/1:1,16:19:38.56:430,39,0
chr10	86027759	.	A	AT	8098.73	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=5.838;DP=543;FS=5.678;HRun=1;HaplotypeScore=71.1786;InbreedingCoeff=0.9984;MQ=63.27;MQ0=1;MQRankSum=-1.014;QD=31.64;ReadPosRankSum=-0.845;VQSLOD=4.0333;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:78.22:1058,78,0	0/0:15,0:15:45.08:0,45,541	0/0:21,0:11:23.59:0,24,234	0/0:14,0:8:22.59:0,23,258	0/0:16,0:16:45.14:0,45,568	0/0:10,0:10:30.08:0,30,363	1/1:0,23:23:42.14:584,42,0	1/1:4,34:38:99:1294,102,0	0/0:15,0:15:45.10:0,45,528	0/0:15,0:15:42.11:0,42,510	0/0:7,0:7:21.05:0,21,256	0/0:17,0:17:48.01:0,48,567	0/0:13,0:13:36.11:0,36,452	0/0:14,0:14:42.10:0,42,501	0/0:20,0:20:57.07:0,57,701	0/0:18,0:18:51.15:0,51,635	0/0:32,0:32:87.22:0,87,1063	1/1:0,20:20:45.15:625,45,0	1/1:1,23:24:42.34:799,42,0	1/1:1,20:21:48.09:627,48,0	1/1:3,31:34:55.79:942,56,0	0/0:17,0:17:51.04:0,51,586	0/0:10,0:10:30.06:0,30,344	0/0:18,0:18:45.14:0,45,568	0/0:15,0:15:45.09:0,45,525	1/1:1,16:17:48.12:631,48,0	1/1:0,22:22:59.93:830,60,0	1/1:0,22:22:51.17:708,51,0
chr10	86028133	.	C	CGTGT	1542.26	PASS	AB=1.000;AC=26;AF=0.500;AN=52;BaseQRankSum=3.459;DP=564;FS=17.081;HRun=0;HaplotypeScore=120.0594;InbreedingCoeff=0.4542;MQ=68.62;MQ0=11;MQRankSum=-2.900;QD=4.79;ReadPosRankSum=-3.520;VQSLOD=0.3923;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:31:0.21:0,0,0	1/1:12,0:12:2.41:30,2,0	./.	./.	0/0:10,0:10:6.01:0,6,71	0/0:14,0:14:9.01:0,9,116	1/1:23,0:22:8.80:158,9,0	1/1:13,0:12:2.68:11,3,0	0/0:13,0:13:9.01:0,9,116	1/1:21,0:20:9.50:171,10,0	1/1:5,0:7:2.74:12,3,0	0/0:17,0:17:9.01:0,9,117	0/0:13,0:14:18.04:0,18,232	0/1:14,0:14:36.18:36,0,40	0/0:19,0:22:9:0,9,83	0/0:11,0:13:6.01:0,6,74	1/1:23,7:32:18.06:329,18,0	1/1:25,0:25:1.58:197,2,0	1/1:26,0:24:12.04:218,12,0	0/0:17,0:16:0.94:0,1,1	0/1:55,0:54:27.44:128,0,27	0/0:20,0:21:6.01:0,6,74	0/1:9,0:9:3.27:3,0,40	0/0:24,0:24:3.01:0,3,46	0/0:11,0:12:6.01:0,6,74	1/1:26,0:26:15.96:179,16,0	1/1:14,0:16:11.90:191,12,0	1/1:11,0:11:3.01:44,3,0
chr10	86028179	.	T	TGCGC	4754.29	PASS	AB=0.974;AC=17;AF=0.304;AN=56;BaseQRankSum=-3.979;DP=536;FS=3.104;HRun=0;HaplotypeScore=106.5909;InbreedingCoeff=0.6555;MQ=58.07;MQ0=8;MQRankSum=1.413;QD=19.81;ReadPosRankSum=0.583;VQSLOD=4.6130;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,16:25:2.02:0,2,6	0/0:12,0:12:11.99:0,12,159	0/0:19,0:10:23.17:0,23,399	0/0:26,0:16:13.95:0,14,589	0/0:12,0:12:36.11:0,36,582	0/0:14,0:14:33.07:0,33,509	1/1:25,0:25:28.41:719,28,0	1/1:20,0:20:54.71:790,55,0	0/0:13,0:13:39.05:0,39,619	0/0:7,0:7:6.38:0,6,231	0/0:15,0:15:33.04:0,33,447	0/0:17,0:17:41.35:0,41,664	0/0:17,0:17:24.35:0,24,643	0/0:14,0:14:35.62:0,36,534	0/0:22,0:22:54.18:0,54,854	0/0:19,0:19:45.08:0,45,717	0/1:32,0:32:3.25:3,0,439	1/1:4,13:21:3.49:483,3,0	1/1:23,0:22:56.40:645,56,0	1/1:5,0:22:2.85:24,3,0	0/1:50,1:51:16.40:1077,0,16	0/0:23,0:23:60.20:0,60,985	0/0:9,0:9:21.03:0,21,290	0/0:17,0:17:36.12:0,36,590	0/0:14,0:13:30.57:0,31,499	1/1:4,15:21:8.66:501,9,0	0/1:15,0:16:19.21:241,0,19	1/1:9,0:8:22.83:270,23,0
chr10	86028453	.	TA	T	2490.42	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.668;DP=601;FS=3.172;HRun=7;HaplotypeScore=58.4152;InbreedingCoeff=0.8859;MQ=81.66;MQ0=0;MQRankSum=-2.250;QD=25.41;ReadPosRankSum=1.371;VQSLOD=4.4377;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,40:42:99:1224,120,0	0/0:1,0:1:3.01:0,3,38	0/0:18,0:19:44.47:0,44,500	0/0:12,0:12:27.07:0,27,316	0/0:14,0:14:42.13:0,42,528	0/0:29,0:29:75.24:0,75,944	1/1:5,28:33:75.16:765,75,0	0/0:28,0:28:75.24:0,75,944	0/0:25,0:25:69.21:0,69,856	0/0:14,0:14:30.10:0,30,377	0/0:14,0:14:33.11:0,33,415	0/0:16,0:16:42.13:0,42,528	0/0:21,0:21:63.19:0,63,779	0/0:16,0:16:48.15:0,48,604	0/0:27,0:27:75.24:0,75,943	0/0:20,0:20:57.17:0,57,706	0/0:42,0:42:99:0,117,1446	1/1:2,21:23:63.14:643,63,0	0/0:30,0:30:84.26:0,84,1045	0/0:14,0:14:33.11:0,33,415	0/0:38,0:38:99:0,114,1408	0/0:23,0:23:66.21:0,66,830	0/0:17,0:17:48.15:0,48,604	0/0:23,0:23:63.19:0,63,781	0/0:18,0:18:51.07:0,51,594	0/0:23,0:23:60.19:0,60,755	0/0:17,0:17:48.14:0,48,591	0/0:2,0:2:3.01:0,3,38
chr10	86028689	.	A	AC	1611.84	PASS	AB=0.571;AC=13;AF=0.232;AN=56;BaseQRankSum=6.282;DP=498;FS=22.127;HRun=5;HaplotypeScore=67.5322;InbreedingCoeff=0.9001;MQ=94.58;MQ0=0;MQRankSum=-2.489;QD=20.15;ReadPosRankSum=-1.236;VQSLOD=1.8353;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:53.03:0,53,136	0/0:10,0:10:27.08:0,27,335	0/0:21,0:21:44.73:0,45,557	0/0:30,0:30:47.12:0,47,739	0/0:22,0:22:66.19:0,66,804	0/0:14,0:14:42.10:0,42,488	0/0:22,0:22:30.79:0,31,79	1/1:9,7:16:30.60:366,31,0	0/0:14,0:14:42.13:0,42,520	0/0:29,0:29:75.24:0,75,925	0/0:22,0:22:63.17:0,63,752	0/0:21,0:21:60.18:0,60,729	0/0:18,0:18:54.17:0,54,666	0/0:17,0:17:51.16:0,51,632	0/0:21,0:21:63.20:0,63,780	0/0:18,0:18:54.17:0,54,669	0/0:26,0:26:78.25:0,78,966	0/0:13,0:13:15.24:0,15,39	1/1:3,11:14:19.94:385,20,0	1/1:6,4:10:21.85:232,22,0	1/1:3,8:11:15.05:189,15,0	0/0:11,0:11:33.10:0,33,408	0/0:12,0:12:36.10:0,36,432	0/0:24,0:24:72.23:0,72,889	0/0:13,0:12:36.11:0,36,441	0/1:4,12:16:3.46:338,0,3	1/1:2,7:9:14.95:210,15,0	1/1:0,4:4:6.02:76,6,0
chr10	86028691	.	CA	C	3640.50	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=9.646;DP=509;FS=11.795;HRun=1;HaplotypeScore=62.3874;InbreedingCoeff=0.9095;MQ=94.62;MQ0=0;MQRankSum=-5.436;QD=22.90;ReadPosRankSum=-2.183;VQSLOD=2.0422;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:40:99:1461,105,0	0/0:10,0:10:30.07:0,30,426	0/0:22,0:22:59.74:0,60,766	0/0:30,0:30:67.86:0,68,922	0/0:23,0:23:69.20:0,69,989	0/0:15,0:15:42.11:0,42,577	1/1:0,23:23:60.20:838,60,0	1/1:16,0:16:40.46:226,40,0	0/0:15,0:15:45.14:0,45,651	0/0:28,0:28:75.23:0,75,1097	0/0:23,0:23:63.18:0,63,889	0/0:20,0:20:60.18:0,60,852	0/0:18,0:18:54.18:0,54,788	0/0:18,0:18:54.17:0,54,787	0/0:22,0:22:66.20:0,66,947	0/0:19,0:19:54.18:0,54,798	0/0:26,0:26:78.25:0,78,1142	1/1:0,13:13:30.10:419,30,0	1/1:16,0:16:22.37:162,22,0	1/1:10,0:10:14.83:133,15,0	1/1:11,0:11:17.36:98,17,0	0/0:11,0:11:33.11:0,33,493	0/0:12,0:12:36.10:0,36,501	0/0:24,0:24:72.20:0,72,1022	0/0:14,0:13:39:0,39,533	0/1:17,0:17:7.65:176,0,8	1/1:9,0:9:19.70:99,20,0	1/1:4,0:4:5.75:29,6,0
chr10	86029576	.	G	GGAA	847.50	PASS	AB=0.603;AC=9;AF=0.161;AN=56;BaseQRankSum=10.577;DP=544;FS=4.591;HRun=0;HaplotypeScore=98.8551;InbreedingCoeff=0.0684;MQ=73.15;MQ0=0;MQRankSum=-2.350;QD=4.79;ReadPosRankSum=-3.317;VQSLOD=0.4734;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:26:27.20:27,0,231	0/0:10,0:10:30.06:0,30,433	0/0:20,0:16:21.10:0,21,239	0/0:14,0:12:2.82:0,3,178	0/0:19,0:23:63:0,63,967	0/0:24,0:27:75:0,75,1072	0/0:3,0:12:16.51:0,17,127	0/1:13,0:30:99:286,0,138	0/0:18,0:20:53.88:0,54,770	0/0:18,0:19:57.09:0,57,785	0/0:11,0:14:38.94:0,39,517	0/0:19,0:20:38.42:0,38,593	0/0:10,0:11:26.89:0,27,382	0/0:15,0:17:47.87:0,48,584	0/0:15,0:17:49.02:0,49,745	0/0:21,0:21:60.09:0,60,968	0/0:26,0:26:68.93:0,69,1022	0/1:5,0:26:43.45:43,0,77	0/1:8,0:16:2.99:3,0,151	1/1:2,0:11:19.83:206,20,0	0/0:6,0:25:17.28:0,17,181	0/0:15,0:18:50.92:0,51,648	0/0:14,0:15:45.12:0,45,705	0/0:14,0:16:48.09:0,48,670	0/0:19,0:21:47.87:0,48,754	0/1:11,1:28:91.04:334,0,91	0/1:6,0:34:66.57:67,0,107	0/1:2,0:6:24.26:24,0,40
chr10	86029944	.	AAT	A	2400.05	PASS	AB=0.897;AC=22;AF=0.440;AN=50;BaseQRankSum=8.452;DP=266;FS=5.014;HRun=0;HaplotypeScore=35.7689;InbreedingCoeff=0.5584;MQ=68.07;MQ0=0;MQRankSum=0.521;QD=16.00;ReadPosRankSum=-0.371;VQSLOD=2.7469;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,13:23:35.94:414,36,0	0/0:6,0:6:9.03:0,9,145	./.	0/0:5,0:5:0.47:0,0,1	0/0:9,0:9:12.04:0,12,194	0/0:18,0:18:30.08:0,30,454	1/1:3,3:6:9.03:109,9,0	1/1:6,23:29:66.20:800,66,0	0/0:3,0:4:9.02:0,9,123	0/0:8,0:8:15.05:0,15,242	0/1:4,1:5:27.37:27,0,88	0/0:4,0:4:6.02:0,6,97	0/1:6,0:6:18.36:18,0,191	0/0:7,0:7:18.06:0,18,290	0/1:9,2:11:60.77:61,0,85	0/0:3,0:3:9.03:0,9,145	0/0:32,0:32:72.25:0,72,1151	0/1:9,1:10:6.37:6,0,367	1/1:3,9:12:28.33:330,28,0	1/1:4,5:9:12.04:145,12,0	1/1:0,1:1:3.01:36,3,0	./.	0/0:5,0:5:9.03:0,9,145	./.	0/0:10,0:9:21.07:0,21,330	1/1:4,5:9:13.28:149,13,0	1/1:10,10:21:26.75:305,27,0	1/1:2,6:8:15.05:182,15,0
chr10	86030396	.	TGCTGCTGCTGCCGCC	T	2807.28	PASS	AB=0.528;AC=15;AF=0.300;AN=50;BaseQRankSum=7.618;DP=417;FS=5.298;HRun=0;HaplotypeScore=142.7010;InbreedingCoeff=0.6804;MQ=57.50;MQ0=24;MQRankSum=-0.054;QD=18.59;ReadPosRankSum=-4.440;VQSLOD=0.8591;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:8:3.08:0,3,35	0/0:3,0:2:6.01:0,6,77	0/0:6,0:1:3.01:0,3,60	0/0:11,0:9:11.66:0,12,310	./.	0/0:4,0:3:6.02:0,6,95	1/1:28,0:28:13.71:341,14,0	1/1:6,15:18:43.13:682,43,0	0/0:24,0:24:69.21:0,69,2988	0/0:8,0:4:8.86:0,9,111	0/0:5,0:4:9.03:0,9,161	0/0:34,0:34:96.29:0,96,4107	0/0:17,0:17:51.17:0,51,2353	0/0:30,0:29:81.19:0,81,3498	0/0:20,0:20:60.18:0,60,2700	0/0:16,0:16:45.15:0,45,2171	0/0:26,0:26:72.24:0,72,3012	1/1:1,23:24:6.02:269,6,0	1/1:9,0:5:7.49:100,7,0	0/0:3,0:3:0.35:0,0,1	1/1:19,0:14:20.99:336,21,0	./.	./.	0/0:32,0:32:96.26:0,96,4693	0/0:8,0:7:9.03:0,9,125	1/1:8,0:7:18.06:303,18,0	0/1:4,34:38:77.58:811,0,78	1/1:0,4:4:3.01:134,3,0
chr10	86030405	.	TGCCGCC	T	2316.75	PASS	AB=0.780;AC=16;AF=0.308;AN=52;BaseQRankSum=5.940;DP=432;FS=7.930;HRun=0;HaplotypeScore=95.4109;InbreedingCoeff=0.7148;MQ=68.02;MQ0=16;MQRankSum=-1.881;QD=15.04;ReadPosRankSum=-6.197;VQSLOD=-0.5651;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:14:0.94:1,0,42	0/0:3,0:2:6.02:0,6,92	0/0:9,0:4:12.02:0,12,204	0/0:17,0:15:15.74:0,16,402	0/0:4,0:4:6.02:0,6,78	0/0:7,0:6:15.05:0,15,228	0/0:23,0:23:4.63:0,5,69	1/1:17,0:16:42.09:629,42,0	0/0:23,0:23:66.22:0,66,1549	0/0:8,0:6:14.85:0,15,175	0/0:4,0:4:9.03:0,9,161	0/0:31,0:31:81.26:0,81,1937	0/0:17,0:17:48.15:0,48,1116	0/0:26,0:25:69.14:0,69,1672	0/0:19,0:19:54.18:0,54,1364	0/0:16,0:16:48.15:0,48,1109	0/0:27,0:27:72.16:0,72,1623	1/1:23,0:23:6.02:105,6,0	1/1:6,6:8:17.94:178,18,0	1/1:2,7:9:0.21:0,0,0	1/1:24,0:21:51.11:800,51,0	./.	./.	0/0:27,0:27:75.26:0,75,2171	0/0:12,0:12:20.92:0,21,305	0/1:3,11:13:3.83:435,0,4	1/1:36,0:36:20.52:283,21,0	1/1:4,0:4:3.01:53,3,0
chr10	86031323	.	GA	G	942.65	PASS	AB=0.967;AC=10;AF=0.179;AN=56;BaseQRankSum=2.614;DP=583;FS=0.000;HRun=11;HaplotypeScore=86.2402;InbreedingCoeff=0.6593;MQ=65.08;MQ0=4;MQRankSum=3.553;QD=7.92;ReadPosRankSum=1.625;VQSLOD=2.5030;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:35:29.45:0,29,186	1/1:0,8:7:14.97:123,15,0	0/1:26,2:19:7.78:8,0,134	0/1:29,0:18:26.45:26,0,100	0/0:34,0:34:89.86:0,90,910	0/0:20,1:21:29.32:0,29,501	0/0:18,0:17:34.46:0,34,216	0/0:27,0:28:36.35:0,36,194	0/0:22,1:23:23.48:0,23,454	1/1:4,13:16:29.94:246,30,0	1/1:3,12:15:35.76:285,36,0	0/0:15,0:15:32.65:0,33,316	0/0:16,0:16:41.85:0,42,402	0/0:13,0:13:5.79:0,6,263	0/0:29,1:31:49.71:0,50,766	0/0:29,0:30:62.72:0,63,627	1/1:3,19:21:50.94:418,51,0	0/0:9,0:10:5.82:0,6,35	0/0:12,0:12:28.06:0,28,138	0/0:20,0:20:5.77:0,6,34	0/0:10,0:11:3.43:0,3,20	0/0:20,1:23:41.21:0,41,604	0/0:25,0:26:59.54:0,60,572	0/0:20,0:20:45.07:0,45,466	0/0:19,1:20:21.70:0,22,417	0/0:33,1:34:15.30:0,15,250	0/0:16,0:16:11.48:0,11,62	0/0:7,0:7:11.38:0,11,70
chr10	86031333	.	A	AAAAAAGAGAGAG	10055.93	PASS	AB=0.849;AC=17;AF=0.304;AN=56;BaseQRankSum=-1.324;DP=594;FS=33.186;HRun=0;HaplotypeScore=205.6544;InbreedingCoeff=0.7117;MQ=66.56;MQ0=3;MQRankSum=-8.831;QD=45.92;ReadPosRankSum=-8.802;VQSLOD=1.6603;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:36:52.46:384,0,52	0/0:9,0:8:18.01:0,18,443	0/0:26,0:22:15.13:0,15,795	0/0:31,0:23:7.75:0,8,593	0/0:34,0:34:90.14:0,90,2575	0/0:20,0:20:57.17:0,57,1619	0/1:20,0:19:99:264,0,460	1/1:10,12:30:87.23:2422,87,0	0/0:19,0:19:54.17:0,54,1567	0/0:18,0:17:42.58:0,43,1099	0/0:16,0:16:41.24:0,41,1083	0/0:12,0:12:29.99:0,30,807	0/0:16,0:16:34.45:0,34,1035	0/0:12,0:12:36.11:0,36,1026	0/0:28,0:28:84.29:0,84,2676	0/0:24,0:24:66.12:0,66,2015	0/0:21,0:21:57.20:0,57,1490	1/1:5,0:11:18.02:704,18,0	1/1:6,9:20:57.15:1824,57,0	1/1:0,0:22:15.05:424,15,0	1/1:6,5:15:10.41:359,10,0	0/0:24,0:24:69.24:0,69,2156	0/0:25,0:25:63.11:0,63,1755	0/0:20,0:20:57.14:0,57,1398	0/0:17,0:17:48.09:0,48,1394	0/1:7,16:41:80.57:2843,0,81	1/1:4,10:18:12.04:578,12,0	1/1:4,0:5:14.96:253,15,0
chr10	86031747	.	C	CTCCTGAG	14994.98	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-3.985;DP=632;FS=9.972;HRun=0;HaplotypeScore=140.5131;InbreedingCoeff=0.9997;MQ=91.48;MQ0=0;MQRankSum=-14.675;QD=88.21;ReadPosRankSum=-3.483;VQSLOD=4.7897;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,3142	0/0:12,0:12:36.12:0,36,915	0/0:31,0:32:81.16:0,81,1843	0/0:31,0:31:78.22:0,78,1748	0/0:36,0:36:99:0,105,2661	0/0:21,0:21:60.21:0,60,1538	0/0:30,0:30:84.29:0,84,2054	1/1:20,13:41:99:3197,105,0	0/0:16,0:16:42.14:0,42,1049	0/0:31,0:31:93.29:0,93,2180	0/0:14,0:14:39.13:0,39,942	0/0:14,0:14:36.12:0,36,924	0/0:19,0:19:54.19:0,54,1354	0/0:17,0:17:51.18:0,51,1298	0/0:20,0:20:54.17:0,54,1325	0/0:20,0:20:60.19:0,60,1487	0/0:23,0:23:60.21:0,60,1537	1/1:6,7:14:27.09:1055,27,0	1/1:11,9:24:66.11:1893,66,0	1/1:2,15:17:51.18:1990,51,0	1/1:6,9:17:32.25:1243,32,0	0/0:17,0:17:48.15:0,48,1175	0/0:20,0:20:60.21:0,60,1489	0/0:30,0:30:78.27:0,78,1939	0/0:14,0:14:42.14:0,42,1045	1/1:4,16:22:60.19:2186,60,0	1/1:7,14:23:57.20:2151,57,0	1/1:2,10:12:33.11:1280,33,0
chr10	86032103	.	AG	A	8091.13	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.227;DP=718;FS=6.889;HRun=1;HaplotypeScore=71.1116;InbreedingCoeff=0.9990;MQ=87.75;MQ0=1;MQRankSum=-2.427;QD=35.64;ReadPosRankSum=0.732;VQSLOD=4.7182;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,172,2672	0/0:10,0:10:30.10:0,30,468	0/0:28,0:27:74.41:0,74,1153	0/0:37,0:33:78.87:0,79,1118	0/0:18,0:18:54.17:0,54,837	0/0:18,0:18:54.16:0,54,838	0/0:29,0:29:87.27:0,87,1344	1/1:0,25:25:63.17:830,63,0	0/0:24,0:24:72.23:0,72,1128	0/0:36,0:36:99:0,108,1707	0/0:15,0:15:39.12:0,39,599	0/0:25,0:25:72.23:0,72,1121	0/0:20,0:20:60.20:0,60,957	0/0:19,0:19:57.18:0,57,887	0/0:22,0:22:66.23:0,66,1055	0/0:20,0:20:60.19:0,60,936	0/0:35,0:35:99:0,105,1678	1/1:0,28:28:75.25:1049,75,0	1/1:0,24:24:72.20:957,72,0	1/1:0,17:16:35.99:437,36,0	1/1:0,69:69:99:2643,190,0	0/0:18,0:18:54.17:0,54,839	0/0:15,0:15:39.13:0,39,623	0/0:26,0:26:78.25:0,78,1214	0/0:19,0:19:57.18:0,57,888	1/1:1,25:24:21.20:833,21,0	1/1:0,28:28:69.23:965,69,0	1/1:0,10:10:27.09:377,27,0
chr10	86032256	.	AT	A	8439.51	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.392;DP=661;FS=0.971;HRun=3;HaplotypeScore=65.4263;InbreedingCoeff=0.9967;MQ=90.34;MQ0=0;MQRankSum=-4.265;QD=32.84;ReadPosRankSum=0.397;VQSLOD=4.9726;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,43:44:99:1487,120,0	0/0:8,0:8:21.07:0,21,302	0/0:20,0:20:49.10:0,49,654	0/0:32,0:32:85.38:0,85,1132	0/0:21,0:21:63.20:0,63,885	0/0:23,0:23:69.20:0,69,941	1/1:0,19:19:57.18:706,57,0	1/1:1,30:31:90.24:1078,90,0	0/0:24,0:24:66.21:0,66,933	0/0:29,0:29:87.29:0,87,1237	0/0:17,0:17:51.17:0,51,733	0/0:15,0:15:39.13:0,39,561	0/0:19,0:19:54.14:0,54,719	0/0:29,0:29:81.24:0,81,1124	0/0:29,0:29:81.25:0,81,1132	0/0:24,0:24:72.22:0,72,1000	0/0:33,0:33:99:0,99,1347	1/1:0,18:17:48.15:595,48,0	1/1:0,20:20:60.17:729,60,0	1/1:0,25:25:72.17:862,72,0	1/1:2,39:41:99:1227,99,0	0/0:18,0:18:54.17:0,54,758	0/0:15,0:15:42.14:0,42,604	0/0:33,0:33:96.31:0,96,1364	0/0:15,0:15:45.15:0,45,648	1/1:0,25:24:72.14:848,72,0	1/1:2,22:24:60.15:726,60,0	1/1:2,8:10:14.56:183,15,0
chr10	86032850	.	TC	T	4880.68	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=8.124;DP=653;FS=4.567;HRun=7;HaplotypeScore=72.1651;InbreedingCoeff=0.9987;MQ=80.20;MQ0=0;MQRankSum=-3.984;QD=26.10;ReadPosRankSum=0.044;VQSLOD=5.5049;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,105,1278	0/0:3,0:10:20.77:0,21,103	0/0:22,0:22:63.20:0,63,792	0/0:20,0:20:44.72:0,45,544	0/0:31,0:31:78.25:0,78,980	0/0:12,0:12:33.11:0,33,412	0/0:37,0:37:96.25:0,96,1177	1/1:4,27:31:78.12:773,78,0	0/0:24,0:24:69.18:0,69,850	0/0:3,0:13:31.65:0,32,173	0/0:1,0:10:25.52:0,26,129	0/0:25,0:25:69.20:0,69,845	0/0:28,0:28:84.27:0,84,1056	0/0:17,0:17:48.15:0,48,604	0/0:28,0:28:75.23:0,75,930	0/0:28,0:28:78.25:0,78,981	0/0:4,0:23:51.36:0,51,272	1/1:1,12:13:27.06:275,27,0	1/1:1,16:17:48.11:490,48,0	1/1:1,24:24:60.13:610,60,0	1/1:2,31:33:84.19:857,84,0	0/0:24,0:24:66.20:0,66,818	0/0:18,0:18:42.13:0,42,519	0/0:25,0:25:72.21:0,72,892	0/0:28,0:26:69.22:0,69,868	1/1:4,18:23:45.49:562,45,0	1/1:1,32:33:93.21:948,93,0	1/1:1,11:12:36.08:366,36,0
chr10	86033488	.	T	TCACA	1144.91	PASS	AB=0.878;AC=14;AF=0.280;AN=50;BaseQRankSum=-3.084;DP=557;FS=0.840;HRun=0;HaplotypeScore=103.3442;InbreedingCoeff=0.2699;MQ=54.16;MQ0=22;MQRankSum=-0.403;QD=4.62;ReadPosRankSum=-1.021;VQSLOD=1.4536;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:32:0:0,0,0	./.	./.	0/1:40,0:14:0:0,0,0	0/0:11,0:11:16.27:0,16,179	0/0:18,0:19:5.88:0,6,66	0/0:26,0:29:2.41:0,2,27	0/1:25,0:24:10.28:19,0,10	0/0:17,0:16:14.84:0,15,138	1/1:8,10:19:25.78:294,26,0	0/0:12,0:12:2.92:0,3,17	0/0:20,0:20:33.04:0,33,419	0/0:15,0:15:15.54:0,16,148	1/1:15,0:19:2.74:12,3,0	1/1:19,3:24:4.91:138,5,0	0/1:11,10:25:28.90:190,0,29	0/1:15,16:35:12.02:615,0,12	0/0:11,0:11:5.97:0,6,45	./.	1/1:13,0:13:0.47:1,0,0	0/0:21,0:20:5.95:0,6,42	0/0:18,0:19:11.61:0,12,121	0/0:20,0:19:14.36:0,14,180	0/1:14,0:14:6.75:7,0,84	0/0:18,0:19:2.60:0,3,236	0/0:20,0:20:14.01:0,14,109	0/0:18,0:18:6:0,6,55	0/0:6,0:6:4.56:0,5,32
chr10	86033525	.	CACACACACACAA	C	2003.25	PASS	AB=0.881;AC=15;AF=0.268;AN=56;BaseQRankSum=1.240;DP=583;FS=2.968;HRun=0;HaplotypeScore=175.4759;InbreedingCoeff=0.7456;MQ=52.42;MQ0=25;MQRankSum=1.454;QD=10.71;ReadPosRankSum=0.141;VQSLOD=2.8451;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:32.71:0,33,268	0/0:10,0:10:15.96:0,16,220	0/0:21,0:8:16.88:0,17,155	0/0:20,0:10:29.94:0,30,263	0/0:17,0:17:39.07:0,39,1046	0/0:19,0:17:33.32:0,33,377	0/1:30,0:28:57.06:57,0,275	1/1:21,0:19:9.14:199,9,0	0/0:21,0:19:48.08:0,48,1095	0/0:21,0:21:51.14:0,51,1492	0/0:11,0:11:11.56:0,12,202	0/0:30,0:30:62.79:0,63,2035	0/0:16,0:16:39.90:0,40,1066	0/0:22,0:21:39.05:0,39,769	0/0:19,0:19:34.02:0,34,1025	0/0:30,0:28:39.55:0,40,1044	0/0:35,0:35:57.52:0,58,2064	0/1:11,0:11:30.70:77,0,31	1/1:15,0:13:23.90:211,24,0	0/1:8,10:17:0:0,0,0	1/1:29,0:26:33.75:305,34,0	0/0:20,0:20:43.53:0,44,1070	0/0:19,0:17:32.62:0,33,1076	0/0:19,0:19:42.95:0,43,1082	0/0:18,0:18:45.95:0,46,1522	1/1:6,29:34:80.82:810,81,0	1/1:14,1:14:20.83:333,21,0	1/1:4,9:13:6.02:195,6,0
chr10	86033754	.	GGGAA	G	4519.94	PASS	AB=0.892;AC=25;AF=0.463;AN=54;BaseQRankSum=10.703;DP=615;FS=1.981;HRun=0;HaplotypeScore=104.5934;InbreedingCoeff=0.6124;MQ=55.51;MQ0=23;MQRankSum=-0.516;QD=14.39;ReadPosRankSum=0.791;VQSLOD=4.4530;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:43:10.77:78,0,11	1/1:1,1:2:3.01:48,3,0	0/1:16,0:9:1.03:1,0,8	./.	0/0:14,0:13:24.07:0,24,520	0/1:18,1:19:14.79:15,0,540	0/0:11,0:11:2.99:0,3,24	0/1:34,0:28:34.90:95,0,35	0/0:24,0:22:39.12:0,39,790	1/1:9,13:22:41.62:598,42,0	1/1:3,10:12:21.07:335,21,0	0/0:26,0:26:48.15:0,48,944	0/0:17,0:17:39.13:0,39,827	0/0:19,0:18:27.07:0,27,516	0/0:28,0:28:48.12:0,48,944	0/0:28,0:27:54.17:0,54,1145	1/1:10,13:24:22.32:341,22,0	0/0:25,0:24:14.63:0,15,589	1/1:13,6:15:18.06:287,18,0	1/1:7,7:13:26.96:362,27,0	1/1:17,13:30:66.21:1027,66,0	0/0:23,0:22:42.12:0,42,869	0/1:18,1:19:11.78:12,0,681	0/0:50,2:52:48.33:0,48,1825	0/0:26,0:26:38.99:0,39,694	1/1:12,18:29:48.40:738,48,0	1/1:15,5:20:35.89:439,36,0	1/1:3,5:8:9.02:144,9,0
chr10	86033917	.	C	CTTT	3817.50	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-1.805;DP=486;FS=1.478;HRun=11;HaplotypeScore=76.9170;InbreedingCoeff=0.9367;MQ=72.80;MQ0=0;MQRankSum=-1.646;QD=23.42;ReadPosRankSum=-6.762;VQSLOD=0.7915;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:67.24:0,67,781	0/0:14,0:14:29.99:0,30,351	0/0:10,0:10:10.93:0,11,121	0/1:7,0:7:0:0,0,0	0/0:22,0:22:37.84:0,38,492	0/0:22,0:22:48.04:0,48,547	0/0:10,0:10:21.01:0,21,233	1/1:6,21:32:72.06:998,72,0	0/0:12,0:14:29.74:0,30,299	0/0:18,0:18:22.76:0,23,429	0/0:11,0:11:20.60:0,21,200	0/0:21,0:23:35.85:0,36,403	0/0:12,0:13:22.50:0,23,277	0/0:17,0:17:41.99:0,42,454	0/0:19,0:19:41.98:0,42,480	0/0:17,0:20:47.82:0,48,509	0/0:22,0:22:47.98:0,48,547	1/1:2,6:9:10.75:173,11,0	1/1:8,15:26:28.02:593,28,0	1/1:2,12:16:36.09:505,36,0	1/1:2,15:21:30.08:531,30,0	0/0:10,0:10:30.06:0,30,337	0/0:12,0:12:20.85:0,21,218	0/0:18,0:22:46.32:0,46,482	0/0:13,0:13:20.96:0,21,245	1/1:6,13:23:42.30:537,42,0	1/1:4,14:20:21.07:368,21,0	1/1:0,9:9:6.02:113,6,0
chr10	86034205	.	T	TA	204.28	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=-3.666;DP=390;FS=4.752;HRun=10;HaplotypeScore=34.7708;InbreedingCoeff=0.7219;MQ=55.42;MQ0=4;MQRankSum=0.452;QD=12.77;ReadPosRankSum=0.608;VQSLOD=2.5090;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:93.97:0,94,751	0/0:9,0:9:20.96:0,21,172	0/0:14,0:5:10.70:0,11,75	./.	0/0:16,0:16:35.22:0,35,294	0/0:21,0:22:52.96:0,53,425	0/0:5,0:6:17.02:0,17,129	0/0:34,0:33:80.89:0,81,664	1/1:3,0:3:2.99:23,3,0	0/0:21,0:21:41.92:0,42,343	0/0:10,0:10:29.96:0,30,246	0/0:9,0:9:14.96:0,15,123	0/0:11,0:11:20.94:0,21,172	0/0:7,0:7:11.98:0,12,99	0/0:10,0:9:14.97:0,15,120	0/0:13,0:13:35.94:0,36,295	0/0:21,0:20:32.95:0,33,271	1/1:1,12:13:27.07:288,27,0	0/0:24,0:23:49.95:0,50,397	0/0:9,0:9:23.97:0,24,197	0/0:3,0:3:8.99:0,9,74	0/0:2,0:2:2.98:0,3,25	0/0:5,0:4:8.99:0,9,74	0/0:12,0:11:23.95:0,24,196	0/0:17,0:17:35.93:0,36,295	0/0:21,0:21:47.89:0,48,392	0/0:25,0:25:50.89:0,51,413	0/0:11,0:11:32.96:0,33,271
chr10	86034922	.	TTTTG	T	4312.43	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.311;DP=600;FS=4.016;HRun=0;HaplotypeScore=99.0093;InbreedingCoeff=0.9790;MQ=66.66;MQ0=10;MQRankSum=-1.761;QD=24.64;ReadPosRankSum=1.597;VQSLOD=4.5055;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:72.24:0,72,1684	0/0:4,0:4:12.04:0,12,289	0/0:35,0:27:20.49:0,20,368	0/0:24,0:13:9.03:0,9,163	0/0:19,0:18:48.16:0,48,1157	0/0:33,0:33:81.25:0,81,1789	0/0:22,0:22:48.15:0,48,1005	1/1:18,6:24:18.05:262,18,0	0/0:26,0:26:75.26:0,75,1758	0/0:27,0:27:66.18:0,66,1522	0/0:20,0:20:42.14:0,42,964	0/0:16,0:16:42.14:0,42,999	0/0:17,0:17:45.13:0,45,931	0/0:12,0:11:27.09:0,27,606	0/0:14,0:14:24.08:0,24,579	0/0:21,0:20:48.16:0,48,1150	0/0:24,0:24:53.80:0,54,1242	1/1:3,12:15:33.11:535,33,0	1/1:13,6:17:15.05:239,15,0	1/1:6,12:18:36.02:500,36,0	1/1:6,14:20:30.10:486,30,0	0/0:9,0:9:21.07:0,21,448	0/0:13,0:13:33.11:0,33,767	0/0:32,0:32:75.17:0,75,1649	0/0:17,0:17:39.13:0,39,918	1/1:8,20:27:60.18:923,60,0	1/1:6,27:32:54.17:869,54,0	1/1:2,15:16:32.78:498,33,0
chr10	86035065	.	T	TAGAGAG	1716.89	PASS	AB=0.917;AC=18;AF=0.360;AN=50;BaseQRankSum=6.629;DP=594;FS=3.340;HRun=0;HaplotypeScore=139.8378;InbreedingCoeff=0.6229;MQ=75.21;MQ0=18;MQRankSum=-6.006;QD=5.96;ReadPosRankSum=-4.741;VQSLOD=0.3137;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,8:34:0:0,0,0	./.	./.	0/1:63,0:30:23.48:23,0,31	0/0:20,0:22:18.06:0,18,328	0/0:10,0:10:9.03:0,9,183	1/1:19,6:28:9.48:182,9,0	1/1:37,0:37:19.81:245,20,0	0/0:13,0:14:30.10:0,30,591	0/0:14,0:14:12.01:0,12,205	0/1:20,0:20:17.02:17,0,299	0/0:15,0:15:30.09:0,30,559	0/0:17,0:18:33.11:0,33,636	0/0:15,0:15:27.09:0,27,537	0/0:17,0:20:21.96:0,22,391	0/0:20,0:20:32.90:0,33,608	0/1:28,0:30:7.75:8,0,944	0/0:24,0:24:4.52:0,5,189	1/1:14,0:14:6.40:92,6,0	1/1:11,0:10:12.04:293,12,0	1/1:24,0:24:11.24:153,11,0	0/0:17,0:17:6.02:0,6,90	0/0:16,0:17:12.04:0,12,225	0/0:20,0:23:18.04:0,18,290	0/0:10,0:10:21.07:0,21,414	1/1:11,0:10:18:277,18,0	1/1:15,0:15:27.05:604,27,0	./.
chr10	86035069	.	G	GAA	1841.12	PASS	AB=0.831;AC=11;AF=0.196;AN=56;BaseQRankSum=10.953;DP=623;FS=8.391;HRun=1;HaplotypeScore=97.5124;InbreedingCoeff=0.4550;MQ=72.69;MQ0=23;MQRankSum=-1.964;QD=12.52;ReadPosRankSum=-1.105;VQSLOD=-0.2539;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:26.58:0,27,212	0/0:6,0:6:14.98:0,15,125	0/0:58,0:26:52.22:0,52,560	0/0:68,0:29:44.22:0,44,468	0/0:23,0:23:62.94:0,63,615	0/0:14,0:14:35.97:0,36,355	0/0:24,0:24:19.52:0,20,177	0/1:37,0:36:22.55:567,0,23	0/0:15,0:15:39.06:0,39,507	0/0:18,0:18:54.10:0,54,581	0/0:22,0:22:41.85:0,42,542	0/0:15,0:15:42.01:0,42,545	0/0:19,0:19:54.07:0,54,654	0/0:15,0:15:39.08:0,39,511	0/0:21,0:21:39.78:0,40,551	0/0:22,0:22:63.05:0,63,728	0/0:32,0:31:87.90:0,88,998	0/1:25,0:25:2.29:2,0,267	0/1:16,1:15:11.47:210,0,11	1/1:6,5:10:26.56:245,27,0	1/1:21,4:24:32.28:475,32,0	0/0:15,0:15:26.99:0,27,265	0/0:17,0:17:44.96:0,45,430	0/0:23,0:22:53.91:0,54,514	0/0:12,0:12:36.05:0,36,445	0/1:5,7:12:44.02:227,0,44	0/1:5,11:16:17.24:202,0,17	1/1:3,0:3:8.97:72,9,0
chr10	86035101	.	G	GAT	2845.67	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=0.164;DP=595;FS=9.015;HRun=0;HaplotypeScore=93.8341;InbreedingCoeff=0.9350;MQ=71.81;MQ0=13;MQRankSum=-4.215;QD=17.79;ReadPosRankSum=-3.452;VQSLOD=1.9828;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:32.64:0,33,248	0/0:4,0:4:8.99:0,9,75	0/0:38,0:18:40.31:0,40,356	0/0:48,0:19:34.34:0,34,315	0/0:18,0:18:50.92:0,51,488	0/0:13,0:13:6.38:0,6,276	0/0:16,0:16:19.80:0,20,172	1/1:33,0:32:82.65:737,83,0	0/0:21,0:21:59.86:0,60,636	0/0:22,0:22:50.75:0,51,524	0/0:18,0:18:35.94:0,36,489	0/0:22,0:22:57.05:0,57,639	0/0:20,0:20:59.97:0,60,641	0/0:21,0:21:57.03:0,57,603	0/0:22,0:22:30.73:0,31,520	0/0:23,0:23:66.06:0,66,740	0/0:29,0:29:80.74:0,81,915	1/1:3,21:24:4.21:330,4,0	1/1:14,0:14:35.75:290,36,0	1/1:13,0:18:35.82:359,36,0	1/1:22,2:24:41.53:380,42,0	0/0:14,0:14:13.65:0,14,202	0/0:12,0:12:30:0,30,305	0/0:25,0:25:64.68:0,65,584	0/0:18,0:18:53.99:0,54,557	1/1:18,1:19:47.22:439,47,0	1/1:17,1:21:46.12:420,46,0	1/1:4,0:3:9:90,9,0
chr10	86035788	.	CA	C	4466.81	PASS	AB=0.938;AC=15;AF=0.268;AN=56;BaseQRankSum=11.430;DP=695;FS=1.474;HRun=8;HaplotypeScore=74.0030;InbreedingCoeff=0.9204;MQ=67.48;MQ0=0;MQRankSum=-2.925;QD=24.02;ReadPosRankSum=0.959;VQSLOD=5.5942;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,108,1287	0/0:12,0:12:36.11:0,36,435	0/0:26,1:26:54.16:0,54,630	0/1:14,1:15:2.71:3,0,229	0/0:30,0:30:90.25:0,90,1062	0/0:21,0:21:60.17:0,60,713	0/0:25,0:25:75.23:0,75,905	1/1:2,29:31:84.12:805,84,0	0/0:27,0:27:75.22:0,75,894	0/0:40,0:40:99:0,117,1392	0/0:24,0:24:66.18:0,66,766	0/0:22,0:22:60.18:0,60,724	0/0:25,0:25:72.22:0,72,869	0/0:22,0:22:60.18:0,60,724	0/0:39,0:39:99:0,117,1408	0/0:31,0:31:87.22:0,87,1014	0/0:20,0:20:57.17:0,57,675	0/0:12,0:12:27.08:0,27,326	1/1:6,10:16:42.05:400,42,0	1/1:1,29:29:84.13:808,84,0	1/1:4,35:39:93.14:898,93,0	0/0:20,0:20:54.17:0,54,652	0/0:26,0:24:60.17:0,60,701	0/0:28,0:28:84.22:0,84,998	0/0:15,0:15:45.14:0,45,544	1/1:2,29:31:93.14:893,93,0	1/1:2,20:22:63.09:602,63,0	1/1:0,2:2:6.01:58,6,0
chr10	86035858	.	G	GGAA	11966.80	PASS	AB=0.609;AC=19;AF=0.339;AN=56;BaseQRankSum=-9.216;DP=721;FS=5.189;HRun=0;HaplotypeScore=99.3015;InbreedingCoeff=0.9126;MQ=84.76;MQ0=0;MQRankSum=-5.469;QD=50.92;ReadPosRankSum=-2.202;VQSLOD=6.3590;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,40:44:93.32:1949,93,0	0/0:8,0:8:24.08:0,24,381	0/0:27,0:27:57.12:0,57,827	0/0:26,0:26:55.42:0,55,866	0/0:33,0:33:96.33:0,96,1519	0/0:28,0:28:72.25:0,72,1135	1/1:4,16:20:51.18:1106,51,0	1/1:5,28:35:87.28:1809,87,0	0/0:26,0:26:72.25:0,72,1141	0/0:29,0:29:81.27:0,81,1265	0/0:26,0:26:66.22:0,66,1047	0/0:31,0:31:84.28:0,84,1311	0/0:26,0:26:75.26:0,75,1187	0/0:29,0:29:87.30:0,87,1376	0/0:42,0:42:99:0,114,1763	0/0:34,0:34:93.32:0,93,1473	0/0:23,0:23:60.20:0,60,952	1/1:15,0:15:45.15:747,45,0	1/1:4,10:15:39.13:823,39,0	1/1:4,20:23:60.16:1265,60,0	1/1:5,27:32:84.18:1707,84,0	0/0:34,0:34:87.04:0,87,1374	0/0:18,0:18:51.17:0,51,808	0/0:24,0:24:72.16:0,72,1087	0/0:22,0:22:57.19:0,57,904	0/1:10,18:28:16.90:1458,0,17	1/1:3,15:18:45.11:906,45,0	1/1:0,3:3:9.03:197,9,0
chr10	86035864	.	A	AGAG	7346.11	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=14.561;DP=703;FS=11.556;HRun=0;HaplotypeScore=109.1839;InbreedingCoeff=0.4312;MQ=80.79;MQ0=0;MQRankSum=-5.130;QD=31.94;ReadPosRankSum=0.254;VQSLOD=4.8105;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:39:36.38:1163,36,0	0/0:11,0:11:30.08:0,30,497	0/0:22,0:22:63.17:0,63,1051	0/0:21,0:21:56.28:0,56,1013	0/0:33,0:33:99:0,99,1815	0/0:26,0:26:78.24:0,78,1377	0/1:20,0:20:30.80:572,0,31	0/1:36,0:36:61.22:935,0,61	0/0:26,0:26:78.24:0,78,1377	0/0:31,0:31:87.28:0,87,1536	0/0:26,0:26:72.23:0,72,1284	0/0:29,0:29:87.29:0,87,1586	0/0:27,0:27:78.26:0,78,1415	0/0:30,0:30:90.29:0,90,1645	0/0:39,0:39:99:0,117,2111	0/0:32,0:32:96.32:0,96,1759	0/0:22,0:22:63.20:0,63,1143	1/1:0,15:15:45.15:1106,45,0	0/1:14,0:14:3.88:403,0,4	0/1:24,0:24:18.76:757,0,19	1/1:33,0:33:6.61:962,7,0	0/0:34,0:34:93.29:0,93,1668	0/0:17,0:17:51.17:0,51,946	0/0:24,0:24:72.16:0,72,1269	0/0:23,0:23:69.18:0,69,1163	0/1:27,0:27:77.53:824,0,78	0/1:19,0:18:20.78:492,0,21	1/1:3,0:3:9.03:132,9,0
chr10	86035951	.	G	GT	5826.67	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-9.320;DP=729;FS=7.222;HRun=4;HaplotypeScore=72.1723;InbreedingCoeff=0.9517;MQ=80.07;MQ0=0;MQRankSum=-4.550;QD=34.48;ReadPosRankSum=0.171;VQSLOD=5.2256;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,135,1502	0/0:11,0:11:33.09:0,33,374	0/0:15,0:15:33.08:0,33,366	0/0:23,0:23:60.03:0,60,631	0/0:28,0:28:81.22:0,81,909	0/0:25,0:25:69.20:0,69,782	0/0:27,0:27:78.22:0,78,885	1/1:7,29:36:87.29:1189,87,0	0/0:31,0:31:87.23:0,87,975	0/0:40,0:40:99:0,117,1317	0/0:24,0:24:66.19:0,66,748	0/0:21,0:21:60.17:0,60,680	0/0:25,0:25:69.18:0,69,773	0/0:25,0:25:72.17:0,72,796	0/0:38,0:38:99:0,108,1224	0/0:26,0:26:75.21:0,75,850	0/0:28,0:28:75.17:0,75,836	0/0:12,0:12:24.07:0,24,272	1/1:1,9:10:27.09:367,27,0	1/1:1,28:29:81.18:1066,81,0	1/1:1,28:29:81.21:1068,81,0	0/0:27,0:27:81.17:0,81,895	0/0:17,0:17:48.14:0,48,544	0/0:38,0:38:99:0,111,1259	0/0:29,0:29:87.25:0,87,986	1/1:5,31:36:0.28:1170,0,0	1/1:3,16:18:48.14:639,48,0	1/1:2,8:10:24.08:328,24,0
chr10	86036030	.	GT	G	2897.39	PASS	AB=0.567;AC=13;AF=0.232;AN=56;BaseQRankSum=13.737;DP=632;FS=1.410;HRun=1;HaplotypeScore=92.1796;InbreedingCoeff=0.8947;MQ=84.50;MQ0=0;MQRankSum=-13.072;QD=26.83;ReadPosRankSum=-1.693;VQSLOD=3.1196;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,2050	0/0:10,0:10:30.09:0,30,456	0/0:21,0:21:60.09:0,60,953	0/0:23,0:23:60.16:0,60,884	0/0:12,0:12:36.12:0,36,570	0/0:28,0:28:81.28:0,81,1292	0/0:33,0:33:99:0,99,1549	1/1:0,24:22:66.20:870,66,0	0/0:27,0:27:81.28:0,81,1280	0/0:28,0:28:84.27:0,84,1303	0/0:20,0:20:60.18:0,60,912	0/0:32,0:32:96.33:0,96,1532	0/0:16,0:16:48.16:0,48,763	0/0:25,0:25:75.23:0,75,1149	0/0:29,0:29:87.27:0,87,1343	0/0:19,0:19:57.18:0,57,887	0/0:44,0:44:99:0,132,2109	0/0:22,0:22:63.17:0,63,955	1/1:0,11:11:30.07:388,30,0	1/1:0,16:16:36.03:437,36,0	1/1:0,26:26:39.49:529,39,0	0/0:18,0:18:54.16:0,54,817	0/0:21,0:21:63.21:0,63,1007	0/0:33,0:33:96.33:0,96,1530	0/0:19,0:19:57.19:0,57,911	0/1:4,13:17:95.80:459,0,96	1/1:1,7:7:15.01:179,15,0	1/1:1,5:6:18.04:226,18,0
chr10	86036035	.	GATCAC	G	5555.97	PASS	AB=0.556;AC=13;AF=0.232;AN=56;BaseQRankSum=14.212;DP=615;FS=5.333;HRun=0;HaplotypeScore=129.1607;InbreedingCoeff=0.8898;MQ=84.10;MQ0=0;MQRankSum=-13.699;QD=57.28;ReadPosRankSum=-2.423;VQSLOD=4.9820;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,4382	0/0:10,0:10:30.10:0,30,999	0/0:21,0:21:60.21:0,60,1890	0/0:21,0:21:60.20:0,60,1864	0/0:12,0:12:36.12:0,36,1093	0/0:29,0:29:84.29:0,84,2745	0/0:36,0:36:99:0,105,3427	1/1:0,21:19:57.20:1309,57,0	0/0:23,0:23:69.24:0,69,2297	0/0:26,0:26:78.27:0,78,2590	0/0:19,0:19:57.20:0,57,1882	0/0:33,0:33:99:0,99,3174	0/0:15,0:15:45.15:0,45,1426	0/0:24,0:24:72.25:0,72,2395	0/0:29,0:29:84.27:0,84,2632	0/0:18,0:18:54.19:0,54,1743	0/0:45,0:45:99:0,135,4451	0/0:22,0:22:63.22:0,63,2096	1/1:1,8:9:24.08:549,24,0	1/1:0,15:15:42.14:899,42,0	1/1:0,24:25:69.19:1416,69,0	0/0:18,0:18:51.18:0,51,1697	0/0:21,0:21:63.22:0,63,2098	0/0:31,0:31:90.27:0,90,2697	0/0:20,0:20:57.20:0,57,1844	0/1:3,12:15:99:778,0,255	1/1:0,7:6:12.04:263,12,0	1/1:0,5:5:15.05:343,15,0
chr10	86036187	.	C	CAAAA	2895.65	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=6.345;DP=541;FS=3.095;HRun=3;HaplotypeScore=154.7770;InbreedingCoeff=0.4747;MQ=57.62;MQ0=16;MQRankSum=-7.696;QD=13.79;ReadPosRankSum=-2.976;VQSLOD=-0.6984;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:25.57:0,26,376	0/0:11,0:11:14.82:0,15,95	0/0:33,0:14:1.05:0,1,243	0/0:35,0:14:5.78:0,6,115	0/0:24,0:24:56.71:0,57,737	0/0:19,0:17:48.05:0,48,708	0/0:23,0:23:14.89:0,15,189	1/1:24,0:22:51.46:672,51,0	0/1:15,0:15:13.02:13,0,302	0/1:24,0:22:6.81:7,0,139	0/1:30,0:29:30.25:30,0,188	0/1:19,0:19:12.45:12,0,178	0/0:12,0:11:0.01:0,0,281	0/1:16,0:16:23.31:23,0,355	0/0:13,0:13:6.82:0,7,328	0/0:9,0:8:17.52:0,18,236	0/0:29,0:29:6.83:0,7,74	0/0:17,0:15:35.77:0,36,423	1/1:10,0:9:20.96:227,21,0	1/1:17,0:15:38.86:366,39,0	1/1:6,0:5:5.97:47,6,0	0/0:24,0:24:47.93:0,48,589	0/0:14,0:13:5.42:0,5,264	0/0:17,0:16:10.67:0,11,455	0/0:20,0:20:32.80:0,33,583	1/1:23,2:23:62.77:827,63,0	1/1:12,1:13:38.67:409,39,0	1/1:10,1:11:29.94:451,30,0
chr10	86036190	.	AC	A	1546.37	PASS	AB=0.977;AC=18;AF=0.321;AN=56;BaseQRankSum=6.313;DP=554;FS=5.000;HRun=1;HaplotypeScore=116.2284;InbreedingCoeff=0.6538;MQ=57.33;MQ0=20;MQRankSum=-7.363;QD=8.18;ReadPosRankSum=-2.755;VQSLOD=-0.0041;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:34.90:0,35,140	0/0:11,0:11:23.41:0,23,157	0/1:32,1:14:4.86:5,0,151	0/0:37,0:14:7.86:0,8,132	0/0:24,0:24:29.32:0,29,468	0/0:21,1:18:45.88:0,46,406	0/0:22,0:22:10.39:0,10,50	1/1:13,8:19:49.37:350,49,0	0/0:18,0:18:16.88:0,17,224	0/0:26,0:23:58.73:0,59,440	0/0:30,0:29:14.71:0,15,454	0/1:18,0:18:3.31:3,0,139	0/0:15,0:14:8.90:0,9,189	0/1:19,0:19:17.57:18,0,199	0/0:14,0:14:30.13:0,30,283	0/0:10,0:9:24.01:0,24,235	0/0:29,0:29:17.93:0,18,201	0/0:15,1:14:26.60:0,27,203	1/1:10,0:8:9.70:107,10,0	1/1:12,5:15:42.55:307,43,0	1/1:6,0:5:5.97:47,6,0	0/0:22,0:22:48.53:0,49,408	0/1:14,1:14:26.08:26,0,166	0/0:18,0:17:14.03:0,14,301	0/0:22,0:22:35.87:0,36,439	1/1:22,3:23:63.56:410,64,0	1/1:12,2:13:35.47:233,35,0	1/1:8,3:11:29.53:234,30,0
chr10	86036191	.	CAAAAAAAAAAAA	C	2753.10	PASS	AB=0.994;AC=13;AF=0.232;AN=56;BaseQRankSum=2.505;DP=571;FS=9.751;HRun=15;HaplotypeScore=211.4197;InbreedingCoeff=0.1425;MQ=56.98;MQ0=20;MQRankSum=-4.963;QD=12.93;ReadPosRankSum=4.223;VQSLOD=-0.2340;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:28:51.15:1540,51,0	0/1:11,0:11:1.41:1,0,490	0/0:33,0:14:28.62:0,29,314	0/0:37,0:14:10.58:0,11,152	0/0:25,0:27:72.21:0,72,2857	0/0:21,0:19:51.16:0,51,1838	1/1:1,21:22:30.10:856,30,0	0/1:21,0:20:56.25:56,0,156	0/0:18,0:18:42.12:0,42,1131	0/1:26,0:23:59.10:59,0,1204	0/0:23,0:29:4.81:0,5,2513	0/0:18,0:19:54.17:0,54,1440	0/0:14,0:15:45.14:0,45,1684	0/0:18,0:19:51.14:0,51,1749	0/0:17,0:16:48.14:0,48,1778	0/0:10,0:9:24.07:0,24,1068	0/1:26,0:28:34.56:35,0,944	0/1:16,0:15:81.75:269,0,82	0/1:10,0:8:28.63:29,0,238	0/0:16,0:14:0.41:0,0,675	0/1:6,0:5:0:0,0,0	0/0:21,0:23:54.15:0,54,2022	0/0:14,0:16:42.14:0,42,1457	0/0:18,0:17:42.12:0,42,1765	0/0:20,0:22:63.20:0,63,2467	0/1:26,0:24:52.73:53,0,1267	0/1:16,0:15:9.62:10,0,1062	0/0:12,0:12:8.84:0,9,385
chr10	86036193	.	A	AAC	2433.74	PASS	AB=0.979;AC=16;AF=0.286;AN=56;BaseQRankSum=0.411;DP=579;FS=7.865;HRun=0;HaplotypeScore=136.2850;InbreedingCoeff=0.5586;MQ=55.45;MQ0=26;MQRankSum=-0.935;QD=11.43;ReadPosRankSum=2.981;VQSLOD=3.1819;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:12.98:0,13,122	1/1:2,7:9:14.13:130,14,0	0/0:32,0:13:11.64:0,12,167	0/0:37,0:12:7.36:0,7,50	0/0:28,0:28:69.74:0,70,794	0/0:24,0:19:50.93:0,51,595	0/0:21,0:21:21.74:0,22,97	0/1:22,0:19:0.76:162,0,1	0/0:15,0:15:41.68:0,42,369	1/1:11,19:29:50.45:622,50,0	1/1:23,11:33:20.70:737,21,0	0/0:20,0:20:26.45:0,26,367	0/0:16,0:15:41.82:0,42,429	0/0:19,0:19:40.12:0,40,435	0/0:18,0:17:47.55:0,48,518	0/0:11,0:10:24.07:0,24,313	1/1:7,19:30:35.14:397,35,0	0/0:18,0:14:19.51:0,20,257	0/1:10,0:7:7.91:43,0,8	0/1:17,0:15:18.81:62,0,19	0/1:5,0:4:0:0,0,0	0/0:21,0:21:41.90:0,42,582	0/0:17,0:16:33.34:0,33,388	0/0:17,0:16:41.90:0,42,518	0/0:23,0:21:54.86:0,55,701	0/1:25,0:25:66.92:234,0,67	0/1:16,0:16:51.18:92,0,51	1/1:8,0:10:8.79:136,9,0
chr10	86036194	.	A	AC	1452.54	PASS	AB=0.989;AC=17;AF=0.304;AN=56;BaseQRankSum=4.573;DP=572;FS=15.942;HRun=0;HaplotypeScore=122.1477;InbreedingCoeff=0.3027;MQ=55.25;MQ0=27;MQRankSum=-3.280;QD=5.59;ReadPosRankSum=4.261;VQSLOD=2.6088;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:37.53:108,0,38	1/1:7,1:8:14.70:113,15,0	0/0:31,0:12:11.71:0,12,182	0/0:36,0:11:9.21:0,9,72	0/0:27,0:27:69.98:0,70,797	0/0:24,0:19:51.87:0,52,563	0/1:21,0:21:4.02:4,0,29	1/1:22,0:19:20.12:186,20,0	0/0:14,0:14:37.66:0,38,317	0/1:30,1:28:68.10:255,0,68	1/1:32,3:34:8.02:358,8,0	0/0:20,0:20:39.65:0,40,385	0/0:16,0:15:41.09:0,41,406	0/0:19,0:19:48.96:0,49,463	0/0:18,0:17:41.66:0,42,490	0/0:11,0:10:26.90:0,27,333	0/1:27,1:28:1.81:113,0,2	0/0:18,0:14:1.80:0,2,183	1/1:10,1:8:11.34:78,11,0	0/1:17,0:15:41.88:51,0,42	0/1:5,0:4:0:0,0,0	0/0:20,0:20:45.41:0,45,561	0/0:18,0:16:41.04:0,41,422	0/0:17,0:16:41.83:0,42,476	0/0:23,0:21:55.10:0,55,673	0/1:26,1:25:32.31:196,0,32	0/1:17,0:16:64.88:82,0,65	0/1:10,0:10:10.86:81,0,11
chr10	86036228	.	CAA	C	2471.60	PASS	AB=0.600;AC=11;AF=0.196;AN=56;BaseQRankSum=4.965;DP=609;FS=24.117;HRun=10;HaplotypeScore=116.4206;InbreedingCoeff=0.5620;MQ=51.93;MQ0=28;MQRankSum=-4.408;QD=17.53;ReadPosRankSum=-0.060;VQSLOD=0.5167;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:36.82:0,37,635	0/0:6,0:6:18.06:0,18,273	0/0:31,0:8:12.66:0,13,153	0/0:47,1:14:35.19:0,35,315	0/0:29,0:28:78.27:0,78,1206	0/0:16,0:15:36.10:0,36,531	0/0:19,0:19:39.13:0,39,591	1/1:17,17:27:2.27:441,2,0	0/0:15,0:15:45.12:0,45,651	0/0:27,0:25:63.20:0,63,949	0/0:33,0:32:68.89:0,69,1018	0/0:17,0:18:53.65:0,54,769	0/0:16,0:17:47.65:0,48,716	0/0:17,0:18:44.64:0,45,658	0/0:18,0:18:38.62:0,39,576	0/0:14,0:14:39.60:0,40,615	0/0:26,0:24:26.43:0,26,580	0/0:19,0:14:27.07:0,27,397	1/1:11,10:15:1.41:233,1,0	0/1:9,12:17:12.28:328,0,12	1/1:1,4:5:6.02:67,6,0	0/0:17,0:17:42.13:0,42,637	0/0:23,0:23:65.17:0,65,906	0/0:15,0:14:30.06:0,30,444	0/0:23,0:24:68.06:0,68,932	1/1:6,26:32:88.61:957,89,0	0/1:5,17:22:3.89:448,0,4	0/1:2,4:6:26.45:147,0,26
chr10	86036556	.	A	AAGGAGGC	14406.45	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=2.375;DP=696;FS=11.966;HRun=0;HaplotypeScore=162.1260;InbreedingCoeff=0.9574;MQ=85.52;MQ0=0;MQRankSum=-16.361;QD=91.18;ReadPosRankSum=-5.391;VQSLOD=3.6108;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,138,3539	0/0:5,0:5:12.04:0,12,288	0/0:23,0:23:55.13:0,55,1317	0/0:41,0:41:99:0,102,2486	0/0:34,0:34:99:0,102,2571	0/0:27,0:27:72.23:0,72,1834	0/0:21,0:21:60.16:0,60,1456	1/1:18,17:36:96.33:3612,96,0	0/0:26,0:26:78.25:0,78,2001	0/0:21,0:21:60.20:0,60,1529	0/0:23,0:23:66.21:0,66,1655	0/0:30,0:30:87.29:0,87,2233	0/0:21,0:21:60.21:0,60,1552	0/0:26,0:26:72.25:0,72,1861	0/0:30,0:30:87.30:0,87,2232	0/0:26,0:26:78.26:0,78,1939	0/0:34,0:34:96.33:0,96,2432	0/0:21,0:21:63.22:0,63,1660	1/1:11,10:21:57.19:1958,57,0	1/1:3,14:17:45.15:1726,45,0	1/1:7,12:24:36.12:1367,36,0	0/0:16,0:16:48.16:0,48,1263	0/0:22,0:22:66.22:0,66,1688	0/0:24,0:24:72.23:0,72,1830	0/0:17,0:17:51.18:0,51,1327	1/1:7,17:28:2.11:2657,2,0	1/1:7,11:19:51.18:1942,51,0	1/1:6,6:13:33.11:1145,33,0
chr10	86037065	.	TAA	T	2834.38	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=6.940;DP=492;FS=12.113;HRun=14;HaplotypeScore=63.9938;InbreedingCoeff=0.9208;MQ=65.18;MQ0=3;MQRankSum=-0.037;QD=15.92;ReadPosRankSum=1.269;VQSLOD=1.4523;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:25:59.61:0,60,758	0/0:7,0:9:14.54:0,15,176	0/0:16,0:7:9.61:0,10,68	0/1:16,0:8:6.04:6,0,8	0/0:25,0:29:80.10:0,80,1012	0/0:23,0:25:50.14:0,50,648	0/0:9,0:9:24.06:0,24,313	1/1:3,17:20:47.97:438,48,0	0/0:10,0:12:27.06:0,27,335	0/0:11,0:12:26.57:0,27,340	0/0:26,0:27:56.56:0,57,674	0/0:7,0:9:17.55:0,18,219	0/0:11,0:14:29.55:0,30,373	0/0:10,0:11:26.52:0,27,321	0/0:14,0:14:30.05:0,30,398	0/0:12,0:15:34.53:0,35,378	0/0:13,0:14:41.61:0,42,527	0/0:5,0:16:27.91:0,28,106	1/1:8,9:17:26.60:226,27,0	1/1:3,19:22:47.88:444,48,0	1/1:7,20:27:51.12:495,51,0	0/0:13,0:13:33.07:0,33,408	0/0:9,0:12:26.01:0,26,289	0/0:15,0:15:39.13:0,39,534	0/0:14,0:17:44.62:0,45,567	1/1:5,11:15:29.99:277,30,0	1/1:1,24:25:57.05:528,57,0	1/1:4,27:34:71.24:619,71,0
chr10	86037170	.	G	GTTTT	2350.81	PASS	AB=0.876;AC=13;AF=0.232;AN=56;BaseQRankSum=-2.288;DP=511;FS=4.247;HRun=14;HaplotypeScore=92.5143;InbreedingCoeff=0.7982;MQ=64.04;MQ0=5;MQRankSum=-4.785;QD=17.68;ReadPosRankSum=-3.383;VQSLOD=1.2284;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:26:49.96:0,50,515	0/1:2,0:2:0:0,0,0	0/0:26,0:11:11.48:0,11,228	0/0:21,0:10:14.74:0,15,163	0/0:23,0:26:24.29:0,24,619	0/0:15,0:15:33.07:0,33,401	0/0:12,0:12:26.98:0,27,315	1/1:9,5:17:28.43:400,28,0	0/0:14,0:15:34.16:0,34,401	0/0:28,0:28:33.27:0,33,630	0/0:19,0:26:54.04:0,54,571	0/0:11,0:14:20.61:0,21,225	0/0:13,0:15:42.11:0,42,490	0/0:14,0:15:31.14:0,31,368	0/0:18,0:20:23.84:0,24,439	0/0:16,0:16:35.65:0,36,437	0/0:21,0:24:56.46:0,56,632	0/0:18,0:21:41.61:0,42,458	1/1:10,3:11:9.50:159,10,0	1/1:11,18:32:43.21:790,43,0	0/1:6,0:5:0:0,0,0	0/0:5,0:6:13.27:0,13,149	0/0:20,0:22:47.52:0,48,550	0/0:12,0:12:26.25:0,26,326	0/0:11,0:13:28.26:0,28,330	0/1:9,11:19:22.67:559,0,23	1/1:6,10:17:24.08:412,24,0	1/1:14,2:14:11.06:200,11,0
chr10	86037712	.	GT	G	4992.35	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.617;DP=677;FS=12.831;HRun=7;HaplotypeScore=65.4421;InbreedingCoeff=0.9749;MQ=67.34;MQ0=0;MQRankSum=-3.920;QD=27.58;ReadPosRankSum=-2.188;VQSLOD=3.7503;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1521	0/0:7,0:7:15.05:0,15,189	0/0:17,0:16:36.58:0,37,425	0/0:11,0:9:5.14:0,5,126	0/0:31,0:31:84.26:0,84,1043	0/0:24,0:24:72.22:0,72,895	0/0:16,0:16:42.13:0,42,528	1/1:4,36:40:99:1075,108,0	0/0:29,0:29:78.20:0,78,929	0/0:34,0:34:99:0,102,1250	0/0:24,0:24:66.20:0,66,819	0/0:21,0:21:57.17:0,57,704	0/0:20,0:20:57.18:0,57,717	0/0:18,0:18:48.14:0,48,587	0/0:28,0:28:75.18:0,75,891	0/0:24,0:24:63.20:0,63,792	0/0:28,0:28:75.21:0,75,915	0/0:26,0:25:72.10:0,72,882	1/1:2,22:24:66.14:669,66,0	1/1:1,29:30:84.19:856,84,0	1/1:1,9:10:27.06:275,27,0	0/0:30,0:30:72.22:0,72,890	0/0:28,0:28:81.25:0,81,1001	0/0:19,0:19:51.12:0,51,623	0/0:19,0:19:48.15:0,48,604	1/1:2,31:33:58.44:893,58,0	1/1:2,21:23:60.13:611,60,0	1/1:1,20:21:60.14:612,60,0
chr10	86039070	.	CT	C	155.97	PASS	AB=1.000;AC=13;AF=0.382;AN=34;BaseQRankSum=-0.766;DP=47;FS=4.047;HRun=1;HaplotypeScore=19.3757;InbreedingCoeff=0.4178;MQ=156.06;MQ0=0;MQRankSum=-3.123;QD=17.33;ReadPosRankSum=0.727;VQSLOD=3.7560;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:6.01:0,6,70	0/0:1,0:1:3.01:0,3,41	0/0:17,0:14:28.51:0,29,343	0/0:9,0:8:16.03:0,16,117	0/0:2,0:2:3.01:0,3,46	./.	0/0:1,0:1:3:0,3,25	1/1:0,2:2:3.01:42,3,0	./.	./.	0/1:1,0:1:0:0,0,0	./.	0/0:1,0:1:3.01:0,3,46	./.	0/0:1,0:1:3:0,3,25	0/0:1,0:1:2.96:0,3,19	./.	./.	1/1:0,1:1:3.01:42,3,0	1/1:0,1:1:3.01:41,3,0	1/1:1,0:1:3:26,3,0	./.	./.	0/0:1,0:1:3.01:0,3,46	./.	1/1:0,2:2:6.02:83,6,0	1/1:0,1:1:3.01:35,3,0	./.
chr10	86039502	.	C	CA	2551.78	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=2.286;DP=341;FS=5.732;HRun=1;HaplotypeScore=71.3609;InbreedingCoeff=0.9256;MQ=66.55;MQ0=0;MQRankSum=-5.167;QD=18.63;ReadPosRankSum=-2.250;VQSLOD=3.0794;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:35.68:305,36,0	0/0:4,0:4:5.98:0,6,58	0/1:14,0:10:1.86:2,0,190	0/0:18,0:13:18.76:0,19,173	0/0:15,0:15:35.99:0,36,386	0/0:11,0:11:26.74:0,27,303	1/1:13,0:13:35.51:289,36,0	1/1:14,2:16:41.98:397,42,0	0/0:16,0:16:39.49:0,39,450	0/0:8,0:8:24.01:0,24,252	0/0:9,0:9:21:0,21,231	0/0:8,0:8:18.06:0,18,230	0/0:14,0:14:38.90:0,39,406	0/0:7,0:7:18.01:0,18,195	0/0:12,0:12:30.04:0,30,348	0/0:19,0:19:50.93:0,51,555	0/0:13,0:12:36.05:0,36,425	1/1:5,1:5:14.99:151,15,0	1/1:16,0:16:43.82:392,44,0	1/1:7,2:9:17.46:197,17,0	1/1:7,1:8:14.94:123,15,0	0/0:9,0:9:24.03:0,24,274	0/0:9,0:9:18.03:0,18,207	0/0:14,0:13:23.97:0,24,255	0/0:18,0:18:51.10:0,51,605	1/1:16,0:15:41.80:383,42,0	1/1:10,1:11:26.94:250,27,0	1/1:9,2:11:29.94:279,30,0
chr10	86039503	.	A	AAT	4535.24	PASS	AB=0.889;AC=20;AF=0.357;AN=56;BaseQRankSum=-2.970;DP=350;FS=6.487;HRun=0;HaplotypeScore=75.8047;InbreedingCoeff=0.8682;MQ=65.84;MQ0=2;MQRankSum=-5.632;QD=31.94;ReadPosRankSum=-2.766;VQSLOD=5.7431;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,8:18:30.15:593,30,0	0/0:4,0:4:5.97:0,6,68	0/1:16,0:10:3.99:4,0,228	0/0:19,0:14:14.84:0,15,197	0/0:13,0:14:35.98:0,36,461	0/0:11,0:11:26.72:0,27,350	1/1:7,6:13:35.96:474,36,0	1/1:9,8:17:34.16:635,34,0	0/0:16,0:16:26.83:0,27,505	0/0:7,0:8:24.03:0,24,296	0/0:9,0:9:20.99:0,21,274	0/0:7,0:7:18.05:0,18,284	0/0:12,0:14:38.92:0,39,490	0/0:8,0:8:18.03:0,18,226	0/0:12,0:12:30.01:0,30,393	0/0:18,0:18:50.95:0,51,668	0/0:13,0:12:36.05:0,36,512	1/1:6,2:7:14.97:219,15,0	1/1:1,14:15:42.08:742,42,0	1/1:2,6:9:8.15:349,8,0	0/1:5,2:7:0.36:166,0,0	0/0:9,0:10:27.01:0,27,347	0/0:9,0:10:18:0,18,254	0/0:15,0:14:23.94:0,24,300	0/0:19,0:19:51.07:0,51,722	1/1:8,8:15:41.85:676,42,0	1/1:8,4:12:29.93:378,30,0	1/1:9,2:11:29.87:297,30,0
chr10	86039560	.	TTC	T	1276.82	PASS	AB=0.700;AC=16;AF=0.308;AN=52;BaseQRankSum=2.697;DP=321;FS=7.055;HRun=0;HaplotypeScore=54.8349;InbreedingCoeff=0.6347;MQ=35.53;MQ0=42;MQRankSum=-5.400;QD=11.10;ReadPosRankSum=2.361;VQSLOD=2.4481;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:13,11:16:26.60:199,0,27	0/0:5,0:5:11.93:0,12,152	./.	./.	0/0:21,0:17:32.96:0,33,432	0/0:14,0:11:27.06:0,27,416	1/1:2,8:10:18:234,18,0	1/1:8,7:15:6.37:283,6,0	0/0:11,0:10:24.01:0,24,340	0/0:9,0:7:12.33:0,12,151	0/0:10,0:9:21.36:0,21,253	0/0:9,0:6:5.99:0,6,50	0/0:13,0:11:20.94:0,21,295	0/0:14,0:9:2.41:0,2,192	0/0:7,0:7:15.04:0,15,241	0/0:9,0:8:14.86:0,15,272	0/0:20,0:8:19.43:0,19,228	1/1:12,1:9:9.63:110,10,0	1/1:5,1:3:4.94:59,5,0	1/1:4,4:6:8.90:108,9,0	0/0:6,0:1:0.47:0,0,1	0/0:15,0:15:36.08:0,36,570	0/0:9,0:9:20.56:0,21,346	0/0:13,0:11:24.02:0,24,381	0/0:14,0:12:26.81:0,27,366	0/1:6,4:8:5.23:115,0,5	1/1:7,10:16:4.97:88,5,0	1/1:5,7:10:2.68:249,3,0
chr10	86039726	.	CTTTT	C	1773.89	PASS	AB=0.596;AC=18;AF=0.321;AN=56;BaseQRankSum=6.747;DP=446;FS=0.500;HRun=16;HaplotypeScore=91.8223;InbreedingCoeff=0.7397;MQ=63.95;MQ0=1;MQRankSum=-0.362;QD=11.99;ReadPosRankSum=7.108;VQSLOD=-0.0506;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:29:5.94:6,0,130	0/0:6,0:6:12.04:0,12,258	0/0:19,0:9:11.95:0,12,157	0/0:13,0:9:8.98:0,9,131	0/0:16,0:18:43.26:0,43,821	0/0:15,0:18:44.95:0,45,610	1/1:2,0:6:5.44:14,5,0	1/1:3,10:10:17.95:234,18,0	0/0:13,0:13:30.05:0,30,521	0/0:21,0:23:53.99:0,54,853	0/0:9,0:12:23.28:0,23,306	0/0:13,0:15:33.11:0,33,596	0/0:17,0:22:45.14:0,45,893	0/0:10,0:12:23.95:0,24,359	0/0:15,0:21:54.18:0,54,962	0/0:12,0:13:33.07:0,33,600	0/0:22,0:24:60.18:0,60,1130	0/1:5,0:19:13.76:14,0,50	1/1:5,1:6:2.79:39,3,0	1/1:5,17:22:48:626,48,0	1/1:4,9:13:13.77:195,14,0	0/0:8,0:8:21.06:0,21,341	0/0:15,0:17:41.99:0,42,657	0/0:13,0:13:36.07:0,36,663	0/0:21,0:27:72.17:0,72,1241	1/1:7,9:17:2:274,2,0	1/1:4,11:16:32.98:402,33,0	1/1:2,5:7:12.03:158,12,0
chr10	86041283	.	AG	A	4478.21	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.171;DP=415;FS=20.581;HRun=6;HaplotypeScore=54.4053;InbreedingCoeff=0.9860;MQ=70.55;MQ0=1;MQRankSum=-3.113;QD=28.34;ReadPosRankSum=-0.100;VQSLOD=2.9475;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:66.17:709,66,0	0/0:7,0:7:21.07:0,21,276	0/0:15,0:12:27.01:0,27,322	0/0:20,0:16:35.38:0,35,380	0/0:10,0:9:27.09:0,27,355	0/0:17,0:16:45.10:0,45,547	1/1:1,23:24:69.17:740,69,0	1/1:2,16:17:42.10:451,42,0	0/0:9,0:9:26.24:0,26,288	0/0:16,0:16:45.15:0,45,591	0/0:9,0:9:27.09:0,27,355	0/0:12,0:12:30.10:0,30,394	0/0:13,0:13:39.09:0,39,482	0/0:10,0:10:30.09:0,30,382	0/0:14,0:15:42.14:0,42,553	0/0:21,0:21:60.20:0,60,788	0/0:31,0:31:93.29:0,93,1203	1/1:0,13:13:39.10:419,39,0	1/1:3,12:15:36.09:386,36,0	1/1:0,3:3:9.02:97,9,0	1/1:3,17:20:45.11:484,45,0	0/0:6,0:6:18.06:0,18,237	0/0:6,0:6:15.05:0,15,197	0/0:26,0:26:75.24:0,75,985	0/0:14,0:14:39.12:0,39,502	1/1:0,20:20:57.14:612,57,0	1/1:3,10:12:27.07:290,27,0	1/1:0,9:9:27.07:290,27,0
chr10	86041416	.	A	ATGT	796.46	PASS	AB=0.956;AC=13;AF=0.232;AN=56;BaseQRankSum=4.106;DP=272;FS=10.518;HRun=0;HaplotypeScore=56.8315;InbreedingCoeff=0.3698;MQ=41.19;MQ0=26;MQRankSum=-6.012;QD=10.62;ReadPosRankSum=-0.980;VQSLOD=1.6854;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:10:12.80:22,0,13	0/0:5,0:5:12.04:0,12,224	0/0:23,0:5:12.04:0,12,202	0/0:21,0:4:5.27:0,5,102	0/0:12,0:10:19.17:0,19,279	0/0:10,0:9:24.08:0,24,424	0/1:3,0:2:13.53:17,0,14	1/1:6,7:7:18.04:296,18,0	0/0:9,0:8:24.08:0,24,419	0/0:8,0:8:21.96:0,22,394	0/0:9,0:8:21.07:0,21,381	0/0:8,0:7:21.07:0,21,357	0/0:4,0:3:6.02:0,6,112	0/0:5,0:5:15.05:0,15,261	0/0:10,0:10:27.02:0,27,413	0/0:11,0:11:33.06:0,33,529	0/0:27,0:26:68.98:0,69,1061	0/1:11,0:11:35.01:94,0,35	1/1:11,4:11:21.32:298,21,0	0/1:4,0:3:44.54:46,0,45	0/0:3,0:3:1.81:0,2,5	0/0:2,0:2:6.02:0,6,112	0/0:2,0:1:3.01:0,3,56	0/0:15,0:13:21.07:0,21,372	0/0:13,0:13:36.12:0,36,647	1/1:4,3:5:12.41:131,12,0	0/1:5,1:6:7.43:30,0,7	1/1:5,0:2:0.50:25,1,0
chr10	86041419	.	A	AT	264.65	PASS	AB=0.907;AC=10;AF=0.179;AN=56;BaseQRankSum=2.113;DP=270;FS=21.675;HRun=0;HaplotypeScore=44.5293;InbreedingCoeff=0.3115;MQ=41.97;MQ0=24;MQRankSum=-3.695;QD=3.73;ReadPosRankSum=-1.160;VQSLOD=1.3022;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:9:0.73:32,0,1	0/0:4,0:4:12.03:0,12,151	0/0:23,0:5:12.01:0,12,131	0/0:21,0:4:7.82:0,8,93	0/0:11,0:9:20.54:0,21,213	0/0:10,0:9:23.86:0,24,246	0/1:4,0:3:7.94:32,0,8	1/1:8,7:9:17.88:134,18,0	0/0:8,0:7:20.05:0,20,205	0/0:8,0:8:23.67:0,24,303	0/0:9,0:8:21.02:0,21,265	0/0:8,0:7:18.36:0,18,183	0/0:3,0:3:6.02:0,6,84	0/0:6,0:6:14.81:0,15,121	0/0:9,0:9:23.98:0,24,281	0/0:10,0:10:29.97:0,30,337	0/0:26,0:26:70.29:0,70,729	0/1:12,0:12:11.16:57,0,11	1/1:10,4:10:9.32:109,9,0	0/1:4,0:3:15.15:15,0,19	0/0:5,0:4:2.22:0,2,7	0/0:2,0:2:6.02:0,6,83	0/0:3,0:2:3.01:0,3,42	0/0:16,0:14:24.03:0,24,283	0/0:13,0:13:33.02:0,33,435	0/1:3,3:4:11.28:28,0,11	0/1:5,2:6:1.03:1,0,15	0/0:4,0:1:2.22:0,2,7
chr10	86041445	.	GA	G	624.66	PASS	AB=0.841;AC=11;AF=0.204;AN=54;BaseQRankSum=0.590;DP=209;FS=10.831;HRun=11;HaplotypeScore=33.6747;InbreedingCoeff=0.4716;MQ=56.76;MQ0=1;MQRankSum=0.691;QD=9.92;ReadPosRankSum=2.622;VQSLOD=0.8472;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:21.01:0,21,212	1/1:0,3:3:8.99:74,9,0	0/1:7,1:4:13.59:14,0,59	0/0:13,0:6:11.96:0,12,102	0/0:5,0:5:15.04:0,15,160	0/0:10,0:10:27.03:0,27,276	0/0:6,0:6:14.77:0,15,140	0/0:14,0:10:18.05:0,18,192	0/0:4,0:4:9.02:0,9,96	1/1:0,6:6:14.97:123,15,0	1/1:0,4:4:11.99:99,12,0	0/0:2,0:2:3.01:0,3,32	0/0:2,0:2:6.02:0,6,64	0/0:3,0:3:5.04:0,5,38	0/0:4,0:4:12.03:0,12,128	0/0:6,0:8:17.88:0,18,174	1/1:5,18:23:50.89:415,51,0	0/0:14,0:14:26.85:0,27,249	0/1:10,2:10:25.22:25,0,167	0/0:3,0:3:3.01:0,3,32	0/0:10,0:9:24.06:0,24,256	./.	0/0:2,0:2:6.01:0,6,60	0/0:7,0:8:20.89:0,21,206	0/0:14,0:14:39.09:0,39,410	0/0:1,0:1:3.01:0,3,32	0/1:4,2:6:34.27:34,0,69	0/0:11,0:12:35.92:0,36,366
chr10	86041657	.	AC	A	1645.15	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=4.134;DP=269;FS=5.751;HRun=6;HaplotypeScore=47.6226;InbreedingCoeff=0.8632;MQ=86.84;MQ0=0;MQRankSum=-3.856;QD=22.23;ReadPosRankSum=0.138;VQSLOD=2.5757;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:9:24.06:0,24,298	0/0:11,0:11:33.10:0,33,419	0/0:17,0:15:15.20:0,15,199	0/0:18,0:13:15.93:0,16,263	0/0:11,0:11:33.11:0,33,428	0/0:14,0:14:39.13:0,39,512	0/0:4,0:4:12.04:0,12,158	1/1:16,7:23:36.07:382,36,0	0/0:3,0:3:6.02:0,6,79	0/0:12,0:12:36.12:0,36,469	0/0:13,0:13:39.13:0,39,513	0/0:5,0:5:15.05:0,15,196	0/0:7,0:7:18.06:0,18,237	0/0:1,0:1:3.01:0,3,39	0/0:7,0:7:21.07:0,21,276	0/0:4,0:4:6.02:0,6,79	0/0:17,0:17:51.17:0,51,669	0/0:14,0:14:39.09:0,39,495	1/1:3,7:10:21.05:225,21,0	1/1:0,4:4:12.03:129,12,0	1/1:0,8:8:21.05:226,21,0	0/0:6,0:6:18.06:0,18,236	0/0:8,0:8:24.08:0,24,315	0/0:10,0:10:27.09:0,27,355	0/0:3,0:3:9.03:0,9,118	1/1:1,5:6:15.04:161,15,0	1/1:1,1:1:3.01:32,3,0	1/1:0,21:21:63.16:677,63,0
chr10	86041819	.	TCCC	T	1257.25	PASS	AB=0.556;AC=15;AF=0.278;AN=54;BaseQRankSum=7.311;DP=345;FS=2.519;HRun=4;HaplotypeScore=53.8036;InbreedingCoeff=0.7714;MQ=61.33;MQ0=23;MQRankSum=-6.939;QD=17.46;ReadPosRankSum=1.258;VQSLOD=0.1173;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,4:6:11.97:144,12,0	0/0:7,0:7:21.07:0,21,395	0/0:41,0:10:9.36:0,9,116	0/0:43,0:20:11.04:0,11,312	0/0:10,0:9:17.89:0,18,300	0/0:13,0:13:30.10:0,30,573	1/1:3,4:4:11.96:158,12,0	1/1:3,5:7:15.04:224,15,0	0/0:5,0:5:15.05:0,15,255	0/0:12,0:12:36.12:0,36,679	0/0:5,0:5:9.03:0,9,175	0/0:15,0:15:33.11:0,33,633	0/0:10,0:10:27.09:0,27,530	0/0:9,0:9:14.84:0,15,271	0/0:14,0:13:24.07:0,24,427	0/0:12,0:12:24.04:0,24,412	0/0:26,0:25:66.16:0,66,1124	1/1:4,0:3:2.98:22,3,0	1/1:6,7:11:17.89:284,18,0	./.	0/0:1,1:1:0:0,0,0	0/0:3,0:3:9.03:0,9,155	0/0:6,0:6:12.04:0,12,222	0/0:25,0:23:39.13:0,39,707	0/0:10,0:10:21.07:0,21,385	0/1:2,7:8:23.35:262,0,23	1/1:3,7:7:12.04:188,12,0	1/1:1,10:9:9.03:155,9,0
chr10	86043413	.	AC	A	2728.84	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.573;DP=634;FS=2.050;HRun=2;HaplotypeScore=66.4391;InbreedingCoeff=0.9997;MQ=84.51;MQ0=0;MQRankSum=0.980;QD=34.11;ReadPosRankSum=1.906;VQSLOD=3.9468;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.22:0,81,1162	1/1:0,14:14:42.14:545,42,0	0/0:28,0:28:42.79:0,43,909	0/0:33,0:32:89.87:0,90,1173	0/0:23,0:23:69.20:0,69,992	0/0:20,0:20:60.17:0,60,856	0/0:21,0:21:63.16:0,63,898	0/0:31,0:31:93.27:0,93,1316	0/0:21,0:21:60.19:0,60,878	1/1:1,27:28:81.18:1002,81,0	1/1:0,10:10:30.05:370,30,0	0/0:25,0:25:75.21:0,75,1098	0/0:20,0:20:54.15:0,54,777	0/0:19,0:19:54.18:0,54,806	0/0:20,0:20:60.20:0,60,898	0/0:24,0:24:72.22:0,72,1039	1/1:1,27:28:75.24:972,75,0	0/0:16,0:16:42:0,42,553	0/0:22,0:22:66.21:0,66,950	0/0:22,0:22:59.97:0,60,823	0/0:43,0:43:99:0,126,1776	0/0:14,0:14:39.13:0,39,580	0/0:23,0:23:66.22:0,66,983	0/0:29,0:29:81.24:0,81,1171	0/0:11,0:11:33.11:0,33,494	0/0:22,0:22:66.20:0,66,951	0/0:22,0:22:66.22:0,66,984	0/0:16,0:16:48.16:0,48,713
chr10	86043915	.	ATG	A	446.90	PASS	AB=0.932;AC=11;AF=0.212;AN=52;BaseQRankSum=4.066;DP=593;FS=1.482;HRun=0;HaplotypeScore=91.8909;InbreedingCoeff=0.1116;MQ=64.43;MQ0=4;MQRankSum=0.154;QD=2.23;ReadPosRankSum=1.385;VQSLOD=1.8365;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,2:40:30.10:30,0,258	0/0:4,0:8:6.01:0,6,66	./.	./.	0/0:21,0:21:39.11:0,39,563	0/1:26,2:27:27.92:28,0,414	0/0:19,0:22:20.70:0,21,207	0/0:36,0:35:11.99:0,12,176	0/0:17,0:17:33.11:0,33,501	0/0:21,0:20:2.97:0,3,259	1/1:7,8:16:20.81:198,21,0	0/1:23,3:26:34.18:34,0,434	0/0:14,0:14:9.15:0,9,311	0/0:19,0:19:2.78:0,3,462	0/0:32,0:32:48.15:0,48,706	0/0:26,2:30:21.53:0,22,698	1/1:8,6:17:23.57:209,24,0	0/0:8,0:12:6.47:0,6,53	0/0:11,0:11:6.02:0,6,85	0/0:12,0:12:15.05:0,15,228	0/0:24,0:32:3:0,3,27	0/0:18,0:18:24.06:0,24,336	0/0:13,0:13:18.04:0,18,238	0/1:21,2:23:0.43:0,0,385	0/0:17,0:18:25:0,25,505	0/1:17,0:17:22.59:23,0,144	0/1:10,2:13:46.05:46,0,187	0/1:19,1:20:24.34:24,0,367
chr10	86044287	.	A	ATGTGTG	2911.56	PASS	AB=0.630;AC=19;AF=0.352;AN=54;BaseQRankSum=8.050;DP=651;FS=0.571;HRun=0;HaplotypeScore=174.3213;InbreedingCoeff=0.7992;MQ=62.03;MQ0=6;MQRankSum=-9.010;QD=13.23;ReadPosRankSum=-4.506;VQSLOD=1.8309;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:13:10.45:0,10,113	0/0:35,0:27:19.43:0,19,410	0/0:30,0:25:15.05:0,15,277	0/0:19,0:20:33.10:0,33,610	0/0:22,0:25:57.18:0,57,1067	1/1:19,0:19:15.05:316,15,0	1/1:33,0:30:18.01:222,18,0	0/0:19,0:20:36.12:0,36,726	0/1:14,0:34:5.10:5,0,65	0/0:5,0:25:6.22:0,6,17	0/0:27,0:29:57.20:0,57,1148	0/0:12,0:15:30.10:0,30,544	0/0:19,0:22:36.12:0,36,686	0/0:28,0:29:0.30:0,0,769	0/0:26,0:30:63.20:0,63,1230	0/0:17,0:25:9.76:0,10,75	1/1:4,0:9:12.04:270,12,0	1/1:13,0:14:15.05:321,15,0	1/1:16,0:17:3.01:79,3,0	1/1:18,1:24:3.01:51,3,0	0/0:25,0:27:53.81:0,54,1038	0/0:18,0:18:36.08:0,36,704	0/0:20,0:20:45.15:0,45,934	0/0:21,0:21:42.14:0,42,827	1/1:20,1:24:27.09:520,27,0	1/1:10,0:19:24.08:627,24,0	1/1:16,0:24:33.07:694,33,0
chr10	86044634	.	G	GTTGTTTGT	6638.64	PASS	AC=22;AF=0.407;AN=54;BaseQRankSum=5.033;DP=648;FS=9.037;HRun=0;HaplotypeScore=163.7350;InbreedingCoeff=0.9714;MQ=58.79;MQ0=3;MQRankSum=-4.851;QD=25.24;ReadPosRankSum=-2.115;VQSLOD=3.3185;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:29.28:0,29,1081	1/1:3,9:12:24.08:975,24,0	./.	0/0:21,0:16:8.83:0,9,188	0/0:21,0:21:54.16:0,54,1247	0/0:23,0:23:36.12:0,36,872	0/0:24,0:24:60.11:0,60,1263	1/1:18,0:25:34.95:320,35,0	0/0:16,0:16:30.10:0,30,716	1/1:15,14:36:63.02:1910,63,0	1/1:13,13:28:36.04:1145,36,0	0/0:23,0:23:51.15:0,51,1112	0/0:14,0:14:18.06:0,18,456	0/0:15,0:15:27.09:0,27,605	0/0:34,0:34:78.26:0,78,1873	0/0:20,0:20:42.11:0,42,902	1/1:12,7:19:9.03:365,9,0	0/0:8,0:19:30.10:0,30,559	1/1:13,0:21:25.73:209,26,0	1/1:11,0:40:70.39:580,70,0	1/1:8,0:23:32.92:268,33,0	0/0:33,0:32:63.21:0,63,1517	0/0:22,0:22:30.10:0,30,752	0/0:29,0:29:63.21:0,63,1519	0/0:20,0:20:21.06:0,21,482	1/1:7,0:30:12.94:478,13,0	1/1:5,0:22:35.91:291,36,0	1/1:3,0:7:11.97:97,12,0
chr10	86044998	.	GA	G	2743.51	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=0.305;DP=538;FS=1.545;HRun=1;HaplotypeScore=75.3556;InbreedingCoeff=0.9484;MQ=54.54;MQ0=4;MQRankSum=3.237;QD=34.29;ReadPosRankSum=1.736;VQSLOD=3.6971;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:24.06:0,24,259	1/1:0,10:10:24.08:333,24,0	0/0:20,0:11:17.02:0,17,405	0/0:4,0:4:9.02:0,9,123	0/0:26,0:26:72.25:0,72,1145	0/0:14,0:14:42.14:0,42,671	0/0:7,0:7:19.17:0,19,189	0/0:42,0:42:99:0,118,1270	0/0:14,0:14:42.14:0,42,671	1/1:0,24:24:72.24:1002,72,0	1/1:0,19:19:45.15:618,45,0	0/0:17,0:17:51.17:0,51,812	0/0:12,0:12:36.12:0,36,573	0/0:13,0:13:36.12:0,36,572	0/0:12,0:12:36.12:0,36,563	0/0:17,0:17:51.17:0,51,804	1/1:1,25:27:56.91:950,57,0	0/0:17,0:17:29.65:0,30,268	0/0:18,0:17:45.09:0,45,531	0/0:36,0:36:35.11:0,35,372	0/0:12,0:12:6.01:0,6,66	0/0:10,0:10:30.10:0,30,479	0/0:15,0:15:39.13:0,39,619	0/0:24,0:24:69.22:0,69,1073	0/0:30,0:30:84.27:0,84,1305	0/0:33,1:34:57.23:0,57,1229	0/0:25,0:24:44.71:0,45,536	0/0:8,0:8:18.84:0,19,209
chr10	86045006	.	A	AAGAAAGAAAGAAAGAG	5973.28	PASS	AB=0.900;AC=20;AF=0.357;AN=56;BaseQRankSum=0.675;DP=557;FS=22.211;HRun=0;HaplotypeScore=212.4472;InbreedingCoeff=0.7775;MQ=55.63;MQ0=4;MQRankSum=-6.481;QD=22.71;ReadPosRankSum=-3.684;VQSLOD=2.0632;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:33:18.06:389,18,0	0/0:13,0:13:23.98:0,24,645	0/0:17,0:9:9.03:0,9,196	0/1:3,0:4:7.58:8,0,71	0/0:22,0:22:51.14:0,51,1786	0/0:16,0:16:45.03:0,45,1387	1/1:5,0:5:11.90:158,12,0	1/1:44,0:44:99:1231,100,0	0/0:15,0:15:36.11:0,36,1332	0/0:21,0:21:51.11:0,51,1651	0/0:17,0:17:33.05:0,33,883	0/0:17,0:17:42.13:0,42,1598	0/0:12,0:12:27.09:0,27,678	0/0:12,0:12:30.06:0,30,890	0/0:12,0:12:24:0,24,517	0/0:17,0:17:48.13:0,48,1463	0/0:28,0:28:71.68:0,72,2332	1/1:7,0:17:3.34:169,3,0	1/1:8,9:24:55.10:1410,55,0	1/1:5,27:42:35.95:1193,36,0	1/1:4,13:20:3:227,3,0	0/0:12,0:12:33.07:0,33,895	0/0:16,0:16:36.07:0,36,853	0/0:22,0:22:54.16:0,54,1815	0/0:25,0:25:66.17:0,66,1979	0/1:35,0:35:65.42:647,0,65	1/1:11,13:26:9.67:282,10,0	1/1:11,0:11:23.94:260,24,0
chr10	86045139	.	CTT	C	2448.12	PASS	AB=0.795;AC=24;AF=0.429;AN=56;BaseQRankSum=8.088;DP=475;FS=0.912;HRun=15;HaplotypeScore=76.9244;InbreedingCoeff=0.6791;MQ=67.40;MQ0=2;MQRankSum=-2.290;QD=9.13;ReadPosRankSum=2.910;VQSLOD=1.7666;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:22:21.86:94,22,0	0/1:1,1:4:9.18:18,0,9	0/1:23,0:13:6.41:6,0,113	0/1:11,0:7:15.80:18,0,16	0/0:30,0:32:71.63:0,72,839	0/0:17,0:16:27.06:0,27,334	1/1:6,0:15:21.92:94,22,0	1/1:12,18:29:44.73:388,45,0	0/0:8,0:10:15.03:0,15,174	0/0:2,1:16:9.37:0,9,113	0/1:6,2:17:43.78:44,0,112	0/0:12,0:12:29.96:0,30,348	0/0:10,0:10:21.04:0,21,255	0/0:5,0:5:2.99:0,3,23	0/0:11,0:12:19.58:0,20,206	0/0:12,0:13:24.03:0,24,277	0/0:7,1:20:5.12:0,5,125	1/1:3,0:13:22.80:96,23,0	1/1:9,5:15:20.38:169,20,0	1/1:4,19:25:48.49:415,48,0	1/1:1,15:16:20.93:185,21,0	0/0:10,0:11:26.93:0,27,312	0/0:16,0:16:36.09:0,36,456	0/0:6,0:7:21.06:0,21,273	0/0:20,0:26:74.05:0,74,852	1/1:6,19:26:38.55:430,39,0	1/1:7,22:30:47.62:408,48,0	1/1:2,17:18:29.57:294,30,0
chr10	86045174	.	CTTATTTAT	C	6330.71	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=9.136;DP=410;FS=3.931;HRun=0;HaplotypeScore=123.0277;InbreedingCoeff=0.9651;MQ=62.24;MQ0=0;MQRankSum=-8.143;QD=37.91;ReadPosRankSum=1.682;VQSLOD=4.4309;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:15:33.02:489,33,0	0/0:8,0:8:18.06:0,18,737	0/0:10,0:8:15.05:0,15,323	0/0:12,0:9:17.76:0,18,246	0/0:29,0:29:78.24:0,78,2633	0/0:15,0:14:30.10:0,30,1091	1/1:7,0:7:11.98:125,12,0	1/1:32,0:31:63.20:1073,63,0	0/0:8,0:8:18.02:0,18,555	0/0:20,0:20:45.15:0,45,1726	0/0:17,0:17:39.13:0,39,1535	0/0:14,0:14:27.09:0,27,1066	0/0:13,0:13:27.05:0,27,949	0/0:7,0:7:21.06:0,21,709	0/0:7,0:7:21.06:0,21,687	0/0:11,0:11:30.10:0,30,1097	0/0:20,0:20:42.14:0,42,1416	1/1:9,1:10:18.01:293,18,0	1/1:6,12:18:39.06:739,39,0	1/1:8,7:15:42.13:768,42,0	1/1:9,2:11:18.15:299,18,0	0/0:6,0:6:6.02:0,6,237	0/0:15,0:15:33.11:0,33,1079	0/0:5,0:5:12.04:0,12,280	0/0:26,0:26:63.20:0,63,1973	1/1:17,10:27:60.20:1263,60,0	1/1:12,5:16:30.10:574,30,0	1/1:8,6:14:36.12:709,36,0
chr10	86045184	.	TATTTATTTATTCATTC	T	3003.98	PASS	AB=0.989;AC=12;AF=0.214;AN=56;BaseQRankSum=3.153;DP=393;FS=11.845;HRun=0;HaplotypeScore=189.6121;InbreedingCoeff=0.1330;MQ=57.01;MQ0=2;MQRankSum=-3.330;QD=18.43;ReadPosRankSum=-2.090;VQSLOD=1.3835;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,5:13:33.02:717,33,0	0/0:7,0:7:21.07:0,21,1557	0/0:6,0:5:15.05:0,15,323	0/0:10,0:7:17.76:0,18,289	0/0:32,0:32:93.29:0,93,5468	0/0:14,0:13:33.11:0,33,2094	1/1:5,1:6:11.98:201,12,0	0/1:32,0:27:99:717,0,225	0/0:7,0:7:18.02:0,18,934	0/0:17,0:17:48.16:0,48,3278	0/0:17,0:17:45.63:0,46,3194	0/0:13,0:13:30.10:0,30,2085	0/0:10,0:10:30.06:0,30,1836	0/0:10,0:10:30.09:0,30,1679	0/0:8,0:8:24.07:0,24,1471	0/0:11,0:11:33.11:0,33,2109	0/0:18,0:17:45.15:0,45,2686	0/1:9,0:10:99:216,0,112	0/1:17,0:17:99:205,0,183	0/1:17,0:17:99:106,0,463	0/1:11,0:11:99:206,0,118	0/0:5,0:5:12.04:0,12,782	0/0:13,0:13:36.12:0,36,2033	0/0:5,0:5:15.05:0,15,708	0/0:27,0:27:78.25:0,78,4159	0/1:25,0:25:99:364,0,513	0/1:18,0:16:99:232,0,424	0/1:14,0:14:99:201,0,148
chr10	86046079	.	TTA	T	8100.74	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.029;DP=529;FS=5.730;HRun=0;HaplotypeScore=68.2587;InbreedingCoeff=0.9989;MQ=90.06;MQ0=0;MQRankSum=-2.454;QD=37.85;ReadPosRankSum=-0.163;VQSLOD=6.7514;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:48.16:672,48,0	0/0:10,0:10:24.08:0,24,432	0/0:20,0:20:54.17:0,54,906	0/0:21,0:21:57.17:0,57,995	0/0:23,0:23:60.21:0,60,1081	0/0:15,0:15:45.15:0,45,804	1/1:1,12:13:33.11:462,33,0	1/1:2,35:37:99:1469,105,0	0/0:17,0:17:51.16:0,51,888	0/0:19,0:19:57.20:0,57,1027	0/0:23,0:23:66.20:0,66,1126	0/0:16,0:16:48.16:0,48,854	0/0:18,0:18:48.16:0,48,864	0/0:14,0:14:36.12:0,36,648	0/0:24,0:24:72.25:0,72,1290	0/0:20,0:19:54.19:0,54,973	0/0:15,0:15:36.12:0,36,647	1/1:0,22:22:60.20:840,60,0	1/1:0,24:24:72.23:986,72,0	1/1:2,19:21:51.13:688,51,0	1/1:0,20:20:54.18:756,54,0	0/0:11,0:11:30.10:0,30,520	0/0:18,0:18:51.17:0,51,911	0/0:14,0:14:39.13:0,39,702	0/0:17,0:17:51.17:0,51,918	1/1:1,17:17:48.16:672,48,0	1/1:0,32:32:90.30:1260,90,0	1/1:1,7:8:21.07:294,21,0
chr10	86048021	.	GT	G	5385.11	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=16.761;DP=503;FS=6.100;HRun=7;HaplotypeScore=60.8726;InbreedingCoeff=0.9973;MQ=84.03;MQ0=0;MQRankSum=-3.543;QD=26.79;ReadPosRankSum=0.978;VQSLOD=5.6146;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:81.18:826,81,0	0/0:14,0:14:42.13:0,42,528	0/0:16,0:16:42.13:0,42,519	0/0:16,0:16:39.12:0,39,473	0/0:26,0:26:72.22:0,72,892	0/0:18,0:18:54.17:0,54,679	1/1:0,6:6:18.04:183,18,0	1/1:9,15:24:45.09:459,45,0	0/0:14,0:14:39.12:0,39,490	0/0:28,0:28:79.80:0,80,985	0/0:20,0:20:57.17:0,57,704	0/0:20,0:20:60.17:0,60,730	0/0:9,0:9:24.08:0,24,298	0/0:10,0:10:30.10:0,30,377	0/0:14,0:14:39.12:0,39,491	0/0:16,0:16:42.13:0,42,528	0/0:25,0:25:75.21:0,75,928	1/1:1,9:10:24.05:245,24,0	1/1:2,17:19:51.11:520,51,0	1/1:0,22:22:63.14:643,63,0	1/1:1,7:8:21.05:214,21,0	0/0:11,0:11:33.11:0,33,415	0/0:11,0:11:33.10:0,33,403	0/0:11,0:11:33.09:0,33,402	0/0:23,0:22:63.20:0,63,793	1/1:1,31:32:93.21:949,93,0	1/1:3,25:28:69.15:704,69,0	1/1:1,21:22:63.14:643,63,0
chr10	86049045	.	CCCT	C	108.26	PASS	AB=0.929;AC=7;AF=0.159;AN=44;BaseQRankSum=-0.131;DP=311;FS=1.316;HRun=0;HaplotypeScore=37.9504;InbreedingCoeff=0.1529;MQ=40.68;MQ0=64;MQRankSum=-0.183;QD=1.90;ReadPosRankSum=1.514;VQSLOD=1.1559;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:13:3.60:0,4,24	./.	0/0:77,0:9:15.46:0,15,206	0/0:64,0:12:23.34:0,23,217	0/1:7,0:5:5.40:22,0,5	0/0:6,0:3:6.47:0,6,57	0/1:5,0:5:3.39:3,0,24	0/1:13,0:6:4.13:4,0,32	./.	1/1:4,0:2:5.65:32,6,0	0/0:5,3:7:0.47:0,0,1	0/0:2,0:2:3.01:0,3,43	0/0:2,0:2:2.96:0,3,19	0/0:3,0:2:5.97:0,6,70	0/1:6,0:5:0.34:0,0,0	0/0:3,0:3:5.95:0,6,62	0/1:10,12:17:9.39:148,0,9	0/0:13,0:8:9.17:0,9,49	0/0:6,0:3:8.70:0,9,47	0/0:6,0:3:7.02:0,7,33	./.	./.	./.	0/0:3,0:2:2.99:0,3,23	0/0:4,0:3:8.88:0,9,96	0/0:12,0:10:7.81:0,8,65	0/0:11,0:9:12.09:0,12,67	./.
chr10	86049310	.	AAAAAAG	A	590.53	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=0.254;DP=463;FS=6.625;HRun=0;HaplotypeScore=81.2016;InbreedingCoeff=0.6164;MQ=44.94;MQ0=68;MQRankSum=-5.748;QD=6.71;ReadPosRankSum=-1.109;VQSLOD=1.0843;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:40.47:0,40,859	1/1:3,1:3:8.97:104,9,0	0/0:46,0:3:1.33:0,1,2	0/1:30,0:3:12.32:12,0,87	0/0:13,0:13:20.45:0,20,567	0/0:12,0:10:27.02:0,27,650	0/1:22,0:21:11.09:11,0,589	0/0:23,0:16:38.85:0,39,532	0/0:18,0:18:45.10:0,45,935	1/1:12,0:10:26.89:223,27,0	1/1:3,2:4:3.01:66,3,0	0/0:14,0:14:30:0,30,710	0/0:8,0:7:18.05:0,18,347	0/0:11,0:10:25.96:0,26,458	0/0:28,0:26:53.93:0,54,1211	0/0:16,0:16:38.95:0,39,845	1/1:11,4:12:20.98:327,21,0	0/0:22,0:21:38.83:0,39,553	0/0:21,0:18:45.10:0,45,647	0/0:12,0:10:24.71:0,25,382	0/0:9,0:9:11.77:0,12,100	0/0:1,0:1:3.01:0,3,91	0/0:5,0:5:9.01:0,9,250	0/0:19,0:17:36.07:0,36,861	0/0:16,0:16:42.81:0,43,889	0/0:20,0:18:42.84:0,43,643	0/0:20,0:18:39.01:0,39,639	0/0:10,0:6:6.02:0,6,100
chr10	86049316	.	GA	G	1132.99	PASS	AB=0.890;AC=24;AF=0.429;AN=56;BaseQRankSum=4.405;DP=454;FS=0.529;HRun=15;HaplotypeScore=54.7676;InbreedingCoeff=0.4583;MQ=45.77;MQ0=48;MQRankSum=-3.461;QD=4.32;ReadPosRankSum=0.946;VQSLOD=0.6521;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,19:31:21.50:122,0,21	1/1:3,0:3:1.39:4,1,0	0/0:36,0:3:0:0,0,0	0/1:28,0:3:10.33:10,0,20	0/1:18,0:18:4.41:4,0,193	0/0:13,0:12:27.66:0,28,239	1/1:12,9:21:35.80:212,36,0	1/1:17,6:17:16.49:94,16,0	0/0:16,2:18:9.28:0,9,196	0/0:12,0:11:1.04:0,1,21	0/1:3,0:3:1:1,0,14	0/0:11,0:11:7.32:0,7,149	0/0:8,0:7:12.15:0,12,89	0/0:10,0:9:8.87:0,9,85	0/0:21,1:21:44.38:0,44,351	0/0:16,0:16:31.61:0,32,264	0/1:16,0:13:10.18:10,0,17	1/1:14,6:19:28.28:171,28,0	1/1:18,4:21:27.93:185,28,0	1/1:8,3:11:17.98:105,18,0	1/1:6,3:9:4.12:22,4,0	0/0:3,0:3:6:0,6,53	0/0:4,0:4:9:0,9,80	0/0:19,0:17:29.74:0,30,249	0/0:16,0:19:8.97:0,9,177	0/1:11,7:17:23.86:121,0,24	1/1:17,4:20:32.63:191,33,0	1/1:9,3:9:10.90:63,11,0
chr10	86049336	.	T	TA	2225.48	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-5.544;DP=497;FS=1.037;HRun=11;HaplotypeScore=60.4264;InbreedingCoeff=0.8609;MQ=58.09;MQ0=18;MQRankSum=-0.490;QD=15.35;ReadPosRankSum=-2.188;VQSLOD=3.5726;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:47.76:0,48,368	0/0:1,0:5:8.14:0,8,24	0/0:36,0:8:6.20:0,6,65	0/0:29,0:11:12.23:0,12,95	0/0:17,0:17:29.75:0,30,227	0/0:13,0:13:29.87:0,30,232	0/0:23,0:23:31.61:0,32,252	1/1:11,19:29:51.09:510,51,0	0/0:16,0:16:23.81:0,24,183	0/0:1,0:13:20.36:0,20,59	0/0:4,0:7:6.09:0,6,18	0/0:12,0:12:17.87:0,18,137	0/0:10,0:9:5.95:0,6,46	0/0:8,0:8:11.90:0,12,92	0/0:20,0:19:11.85:0,12,91	0/0:17,0:17:29.77:0,30,232	0/0:6,0:18:23.98:0,24,69	0/0:18,0:17:29.86:0,30,230	1/1:14,23:35:52.04:705,52,0	1/1:7,7:13:3.78:204,4,0	1/1:4,4:8:6.01:61,6,0	0/0:7,0:7:14.94:0,15,116	0/0:8,0:8:17.89:0,18,137	0/0:15,0:15:26.86:0,27,207	0/0:19,0:19:26.83:0,27,209	1/1:6,15:21:45.04:439,45,0	1/1:13,7:19:29.86:279,30,0	1/1:6,8:13:21.04:213,21,0
chr10	86049530	.	GA	G	657	PASS	AB=0.885;AC=13;AF=0.232;AN=56;BaseQRankSum=-0.123;DP=534;FS=6.723;HRun=14;HaplotypeScore=76.4284;InbreedingCoeff=0.3808;MQ=53.75;MQ0=40;MQRankSum=2.741;QD=3.98;ReadPosRankSum=2.858;VQSLOD=1.0683;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:29:37.22:0,37,198	1/1:2,3:5:8.92:62,9,0	0/1:29,0:7:11.68:12,0,13	0/0:30,0:1:0:0,0,0	0/1:20,4:23:17.56:18,0,301	0/1:15,2:18:5.30:5,0,226	0/0:12,1:23:32.67:0,33,275	0/0:17,1:25:14.49:0,14,223	0/0:19,3:21:6.82:0,7,325	1/1:11,10:19:5.56:147,6,0	1/1:3,8:12:22.78:150,23,0	0/0:15,1:16:6.44:0,6,199	0/0:11,1:12:3.42:0,3,167	0/0:10,1:11:0.41:0,0,126	0/0:19,2:22:10.95:0,11,358	0/0:14,0:16:31.42:0,31,265	1/1:6,20:31:63.66:399,64,0	0/0:5,0:11:17.31:0,17,100	0/0:14,0:20:17.47:0,17,159	0/0:14,1:20:9.05:0,9,156	0/0:7,0:17:23.35:0,23,129	0/1:7,2:9:10.69:11,0,48	0/0:13,0:13:21.90:0,22,193	0/0:21,1:22:27.40:0,27,381	0/1:12,2:14:14.22:14,0,151	0/0:15,0:20:22.22:0,22,151	0/0:10,0:22:28.84:0,29,171	0/0:6,0:9:8.68:0,9,57
chr10	86049766	.	CTATTGTTGTTGTTGT	C	5514.44	PASS	AB=0.687;AC=18;AF=0.321;AN=56;BaseQRankSum=7.906;DP=707;FS=32.031;HRun=0;HaplotypeScore=257.8234;InbreedingCoeff=0.7197;MQ=72.02;MQ0=6;MQRankSum=-2.070;QD=24.95;ReadPosRankSum=-1.144;VQSLOD=2.7386;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:1,0:50:10.96:427,0,11	0/0:9,0:9:24.02:0,24,1004	0/0:21,0:16:44.94:0,45,503	0/0:23,0:22:62.83:0,63,1000	0/0:30,0:30:73.58:0,74,2605	0/0:25,0:25:72.03:0,72,863	1/1:0,0:20:0.16:316,0,0	1/1:9,25:33:89.79:940,90,0	0/0:34,0:34:99:0,102,4986	0/0:26,0:26:74.29:0,74,3374	0/0:19,0:18:53.13:0,53,1496	0/0:33,0:33:96.14:0,96,4582	0/0:33,0:33:96.08:0,96,4471	0/0:32,0:32:96.22:0,96,4825	0/0:39,0:39:99:0,111,4768	0/0:21,0:21:60.10:0,60,2600	0/0:28,0:28:62.66:0,63,2026	1/1:0,0:19:3.01:56,3,0	0/1:17,3:19:19.35:756,0,19	1/1:0,18:18:38.52:816,39,0	1/1:1,18:18:5.93:152,6,0	0/0:26,0:25:69.10:0,69,2725	0/0:25,0:25:73.70:0,74,3030	0/0:41,0:41:99:0,120,6003	0/0:21,0:21:51.03:0,51,2136	1/1:0,15:15:44.86:967,45,0	1/1:1,24:25:20.90:948,21,0	1/1:0,1:1:3.01:136,3,0
chr10	86049768	.	A	ATTGTTG	2110.99	PASS	AB=0.750;AC=7;AF=0.140;AN=50;BaseQRankSum=-5.410;DP=703;FS=0.751;HRun=0;HaplotypeScore=162.2247;InbreedingCoeff=0.7230;MQ=71.31;MQ0=8;MQRankSum=-4.611;QD=23.20;ReadPosRankSum=-2.448;VQSLOD=3.1735;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:23.95:0,24,241	1/1:5,3:8:9.03:247,9,0	./.	./.	0/0:28,0:28:23.12:0,23,422	0/0:14,0:25:27.09:0,27,375	0/0:20,0:20:18.06:0,18,232	./.	0/0:32,0:33:51.14:0,51,920	0/1:20,9:29:0.94:950,0,1	1/1:20,0:19:12.02:187,12,0	0/0:32,0:32:42.10:0,42,776	0/0:32,0:32:42.11:0,42,764	0/0:31,0:32:51.17:0,51,979	0/0:36,0:37:47.83:0,48,904	0/0:21,0:21:24.08:0,24,472	1/1:17,13:33:27.09:863,27,0	0/0:19,0:19:2.89:0,3,42	0/0:21,0:19:9.03:0,9,126	0/0:18,0:18:13.86:0,14,115	0/0:19,0:18:2.84:0,3,14	0/0:24,0:23:21.06:0,21,387	0/0:25,0:26:23.13:0,23,446	0/0:42,0:42:60.15:0,60,1085	0/0:20,0:20:24.07:0,24,447	0/0:15,0:15:15.05:0,15,208	0/0:24,0:24:21.37:0,21,282	0/0:1,0:1:3.01:0,3,42
chr10	86050044	.	G	GA	2256.21	PASS	AB=0.741;AC=25;AF=0.446;AN=56;BaseQRankSum=2.629;DP=464;FS=2.077;HRun=12;HaplotypeScore=75.0244;InbreedingCoeff=0.3936;MQ=72.28;MQ0=0;MQRankSum=-4.158;QD=8.81;ReadPosRankSum=-2.625;VQSLOD=2.3872;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,25:33:32.21:344,32,0	0/1:5,6:11:3.88:127,0,4	0/1:22,0:17:8.52:9,0,65	0/0:19,0:14:14.58:0,15,102	0/0:19,2:21:11.53:0,12,237	0/0:22,0:24:54.01:0,54,381	1/1:5,8:17:32.32:249,32,0	1/1:8,12:21:14.15:299,14,0	0/0:15,0:15:26.79:0,27,195	1/1:7,4:13:12.17:127,12,0	0/1:7,14:24:25.83:202,0,26	0/0:15,0:15:31.86:0,32,237	0/1:11,1:14:1.24:1,0,137	0/0:9,0:9:14.88:0,15,109	0/0:21,0:21:29.61:0,30,217	0/0:19,1:21:20.54:0,21,305	0/1:17,8:25:61.64:248,0,62	1/1:4,15:19:14.15:299,14,0	0/1:1,6:7:0.89:148,0,1	1/1:2,3:5:7.79:55,8,0	0/1:4,4:8:12.47:40,0,12	0/0:18,0:18:41.74:0,42,306	0/0:17,0:19:38.88:0,39,258	0/0:24,0:26:21.61:0,22,270	0/1:12,1:13:5.34:5,0,129	1/1:4,5:10:1.92:156,2,0	0/1:4,6:9:9.83:75,0,10	1/1:0,3:3:6.01:58,6,0
chr10	86050191	.	C	CTTCTTTT	6162.95	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=2.383;DP=435;FS=7.068;HRun=0;HaplotypeScore=101.4396;InbreedingCoeff=0.8926;MQ=76.49;MQ0=0;MQRankSum=-10.122;QD=47.05;ReadPosRankSum=-4.317;VQSLOD=2.8585;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,2:11:9.03:304,9,0	0/0:6,0:6:15.05:0,15,351	0/0:15,0:15:3.27:0,3,154	0/0:15,0:13:1.13:0,1,212	0/0:18,0:18:45.15:0,45,1052	0/0:24,0:24:63.20:0,63,1390	1/1:9,11:20:39.13:1424,39,0	1/1:20,2:23:27.08:918,27,0	0/0:13,0:13:33.09:0,33,661	0/0:18,0:18:30.10:0,30,702	0/0:24,0:24:60.19:0,60,1336	0/0:13,0:13:36.12:0,36,842	0/0:13,0:13:33.10:0,33,724	0/0:18,0:18:48.16:0,48,1121	0/0:20,0:20:45.15:0,45,1011	0/0:21,0:21:57.18:0,57,1264	0/0:29,0:29:69.20:0,69,1520	1/1:5,2:10:9.03:336,9,0	1/1:9,3:11:15.04:394,15,0	1/1:5,4:10:12.04:447,12,0	1/1:3,3:6:6.02:224,6,0	0/0:10,0:10:27.08:0,27,587	0/0:17,0:17:33.11:0,33,771	0/0:6,0:6:18.06:0,18,399	0/0:24,0:24:54.17:0,54,1189	1/1:9,7:16:21.07:783,21,0	1/1:9,7:17:27.06:885,27,0	1/1:3,2:5:12.04:448,12,0
chr10	86050825	.	TCCCC	T	1252.80	PASS	AB=0.759;AC=12;AF=0.214;AN=56;BaseQRankSum=1.254;DP=479;FS=6.823;HRun=13;HaplotypeScore=83.1456;InbreedingCoeff=0.5320;MQ=63.43;MQ0=38;MQRankSum=-2.141;QD=11.82;ReadPosRankSum=1.815;VQSLOD=0.1346;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:17:28.35:0,28,270	0/0:3,0:3:6.02:0,6,84	0/0:71,0:14:39.43:0,39,614	0/0:100,0:25:28.01:0,28,528	0/0:10,0:11:1.33:0,1,55	0/0:8,0:8:9.03:0,9,147	0/0:17,0:17:25.24:0,25,371	0/1:12,2:14:5.59:115,0,6	0/0:10,0:10:11.57:0,12,213	0/0:12,0:12:8.71:0,9,67	0/0:16,0:16:17.63:0,18,257	0/0:6,0:4:9.03:0,9,199	0/0:4,0:4:6.01:0,6,98	0/0:7,0:7:16.30:0,16,311	0/0:12,0:13:24.05:0,24,453	0/0:9,0:9:21.03:0,21,370	0/0:22,0:23:34.63:0,35,439	0/0:11,0:10:21.03:0,21,268	0/1:8,8:16:11.39:353,0,11	1/1:14,3:16:11.75:109,12,0	1/1:8,2:9:3.86:45,4,0	0/0:3,0:3:0:0,0,0	0/0:7,0:7:9:0,9,134	0/0:7,0:9:18.11:0,18,272	0/0:12,0:12:9.35:0,9,109	1/1:19,8:25:41.88:546,42,0	1/1:5,8:14:1.19:228,1,0	1/1:5,0:5:0.44:1,0,0
chr10	86050838	.	CTT	C	141.75	PASS	AB=0.995;AC=6;AF=0.111;AN=54;BaseQRankSum=-0.743;DP=566;FS=5.267;HRun=14;HaplotypeScore=88.4953;InbreedingCoeff=0.5568;MQ=51.05;MQ0=45;MQRankSum=2.907;QD=0.91;ReadPosRankSum=-0.360;VQSLOD=-0.5930;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:41.29:0,41,361	./.	0/1:108,1:17:14.90:15,0,158	0/0:141,1:26:24.76:0,25,179	0/0:8,1:8:12.01:0,12,126	0/0:6,0:6:12.01:0,12,131	0/0:17,0:16:17.96:0,18,166	0/0:12,0:19:42.50:0,43,422	0/0:10,0:10:7.56:0,8,70	1/1:4,9:13:14.23:132,14,0	0/1:10,0:10:0.35:39,0,0	0/0:10,0:8:18.46:0,18,190	0/0:5,0:5:13.58:0,14,144	0/0:8,0:8:21.35:0,21,185	0/0:8,0:7:16.31:0,16,149	0/0:7,0:7:3.48:0,3,41	1/1:22,0:23:13.15:84,13,0	0/0:15,0:14:26.74:0,27,288	0/0:25,0:23:40.91:0,41,312	0/0:11,0:15:26.09:0,26,253	0/0:8,0:7:14.28:0,14,126	0/0:3,0:3:9.03:0,9,124	0/0:7,0:7:19.29:0,19,227	0/0:11,0:11:28.48:0,28,281	0/0:9,0:9:6.35:0,6,127	0/0:25,0:23:49.09:0,49,428	0/0:18,0:18:29.64:0,30,327	0/0:6,0:6:2.95:0,3,19
chr10	86051455	.	GAGTC	G	3570.63	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.399;DP=666;FS=0.474;HRun=0;HaplotypeScore=108.2916;InbreedingCoeff=0.9998;MQ=69.75;MQ0=0;MQRankSum=-3.130;QD=45.20;ReadPosRankSum=1.318;VQSLOD=4.2548;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,3089	1/1:1,16:17:42.14:784,42,0	0/0:17,0:16:37.42:0,37,981	0/0:23,0:22:49.02:0,49,1170	0/0:35,0:35:99:0,99,2613	0/0:15,0:15:45.15:0,45,1199	0/0:21,0:21:60.21:0,60,1590	0/0:29,0:29:72.25:0,72,1920	0/0:24,0:24:69.24:0,69,1800	1/1:2,17:19:51.17:952,51,0	1/1:1,18:20:48.12:827,48,0	0/0:26,0:26:78.27:0,78,2040	0/0:17,0:17:48.16:0,48,1271	0/0:25,0:25:66.23:0,66,1750	0/0:26,0:26:75.24:0,75,1913	0/0:23,0:23:69.24:0,69,1797	1/1:0,23:23:54.19:1008,54,0	0/0:13,0:13:36.11:0,36,904	0/0:22,0:22:60.21:0,60,1595	0/0:33,0:33:90.31:0,90,2311	0/0:40,0:40:99:0,120,3129	0/0:20,0:20:51.18:0,51,1359	0/0:28,0:28:81.28:0,81,2113	0/0:23,0:23:63.22:0,63,1672	0/0:20,0:20:60.21:0,60,1567	0/0:32,1:33:43.33:0,43,2442	0/0:21,0:21:60.19:0,60,1459	0/0:13,0:13:33.11:0,33,880
chr10	86052525	.	GTTT	G	2155.63	PASS	AB=0.801;AC=18;AF=0.321;AN=56;BaseQRankSum=-0.671;DP=438;FS=7.611;HRun=14;HaplotypeScore=56.2081;InbreedingCoeff=0.6182;MQ=45.98;MQ0=37;MQRankSum=-1.080;QD=10.03;ReadPosRankSum=0.836;VQSLOD=-0.4373;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,6:17:33.06:350,33,0	0/0:1,0:1:3.01:0,3,50	0/1:84,0:5:3.60:4,0,12	0/0:85,0:11:10.98:0,11,90	0/0:15,0:13:15.96:0,16,221	0/0:7,0:7:11.26:0,11,165	0/1:9,2:11:1.35:165,0,1	1/1:6,14:16:23.62:226,24,0	0/0:11,0:10:20.38:0,20,234	0/0:11,0:14:37.30:0,37,557	0/0:9,0:9:20.86:0,21,289	0/0:12,0:11:18:0,18,231	0/0:6,0:6:12.04:0,12,200	0/0:6,0:6:14.24:0,14,187	0/0:4,0:6:18.04:0,18,269	0/0:8,0:8:21.03:0,21,355	0/0:23,0:24:40:0,40,635	0/1:8,5:12:14.86:207,0,15	1/1:7,13:17:39.03:439,39,0	1/1:5,8:12:21.03:236,21,0	0/1:3,4:5:10.80:93,0,11	0/0:2,0:2:3.01:0,3,56	0/0:6,0:5:12.04:0,12,202	0/0:4,0:3:6.02:0,6,112	0/0:6,0:6:12.02:0,12,160	1/1:8,7:15:16.38:288,16,0	1/1:6,3:9:20.87:210,21,0	1/1:2,3:5:3.04:127,3,0
chr10	86052656	.	GT	G	1309.35	PASS	AB=0.817;AC=22;AF=0.407;AN=54;BaseQRankSum=5.719;DP=349;FS=13.215;HRun=15;HaplotypeScore=51.2643;InbreedingCoeff=0.5570;MQ=68.27;MQ0=7;MQRankSum=-1.494;QD=6.55;ReadPosRankSum=3.015;VQSLOD=1.2011;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:32:61.14:390,61,0	0/0:7,0:7:5.96:0,6,45	0/0:23,0:11:21:0,21,149	0/1:30,0:10:6.95:7,0,7	0/0:9,0:8:12:0,12,106	0/0:10,0:12:20.84:0,21,172	1/1:2,6:8:17.72:115,18,0	0/1:5,7:6:8.23:52,0,8	0/0:8,0:8:12.43:0,12,99	0/0:7,0:7:14.87:0,15,121	0/1:8,2:10:1.28:1,0,110	0/0:6,0:6:8.99:0,9,77	0/0:4,0:5:5.84:0,6,40	0/0:5,0:4:3:0,3,26	0/0:9,0:9:20.99:0,21,182	0/1:4,1:5:4.27:4,0,91	0/0:28,0:35:54.11:0,54,441	1/1:5,10:15:17.67:115,18,0	1/1:9,10:18:34.41:215,34,0	1/1:0,7:7:14.65:92,15,0	1/1:7,5:13:19.10:109,19,0	0/0:2,0:2:2.99:0,3,24	0/1:4,0:4:7.03:7,0,44	./.	0/0:17,1:18:16.59:0,17,257	1/1:8,6:14:19.61:119,20,0	1/1:0,6:8:17.62:110,18,0	0/1:7,10:17:2.35:158,0,2
chr10	86053042	.	A	ACT	2032.27	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-6.460;DP=661;FS=1.146;HRun=0;HaplotypeScore=97.2593;InbreedingCoeff=0.7988;MQ=89.16;MQ0=4;MQRankSum=0.259;QD=15.63;ReadPosRankSum=-0.958;VQSLOD=3.4913;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,36:49:72.18:1648,72,0	0/0:4,0:4:6:0,6,70	0/0:49,0:33:37.77:0,38,487	0/1:62,0:47:3.46:3,0,372	0/0:27,0:27:57.16:0,57,676	0/0:19,0:20:40.20:0,40,481	1/1:4,13:18:33.09:505,33,0	0/0:35,0:35:54.16:0,54,651	0/0:13,0:14:38.94:0,39,437	0/0:18,0:19:41.96:0,42,485	0/0:15,0:15:32.93:0,33,376	0/0:25,0:25:66.17:0,66,781	0/0:17,0:17:45.14:0,45,543	0/0:21,0:21:39.12:0,39,470	0/0:25,0:26:75.06:0,75,882	0/0:22,0:23:60.01:0,60,702	0/0:25,0:25:63.17:0,63,746	0/0:15,0:15:39.12:0,39,470	0/0:19,0:19:30.09:0,30,362	0/0:12,0:12:24.07:0,24,286	0/0:20,0:22:50.82:0,51,569	0/0:18,0:18:39.12:0,39,468	0/0:16,0:16:27.08:0,27,326	0/0:25,0:25:66.20:0,66,796	0/0:18,0:18:39.12:0,39,470	0/0:26,0:26:66.20:0,66,796	0/0:22,0:22:60.17:0,60,712	0/0:17,0:17:33.09:0,33,385
chr10	86053374	.	T	TTCTA	1296	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=9.140;DP=385;FS=0.000;HRun=0;HaplotypeScore=89.5871;InbreedingCoeff=0.3986;MQ=64.37;MQ0=7;MQRankSum=-5.964;QD=8.53;ReadPosRankSum=0.339;VQSLOD=2.2888;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,1:13:3.43:199,3,0	0/0:5,0:5:15.05:0,15,298	0/0:27,0:10:8.49:0,8,246	0/0:28,0:15:22.52:0,23,346	0/0:20,0:20:51.15:0,51,902	0/0:13,0:13:39.08:0,39,713	1/1:1,5:8:3.45:67,3,0	0/1:34,0:34:99:229,0,179	0/0:6,0:6:18.05:0,18,324	0/0:15,0:15:42.14:0,42,781	0/0:14,0:14:30.10:0,30,598	0/0:5,0:5:9.03:0,9,180	0/0:9,0:9:24.05:0,24,409	0/0:10,0:10:27.01:0,27,428	0/0:13,0:13:39.11:0,39,689	0/0:12,0:11:33.11:0,33,621	0/0:23,0:22:63.18:0,63,1146	0/1:17,0:16:26.11:110,0,26	0/1:22,0:21:99:110,0,165	0/1:10,0:10:55.37:70,0,55	1/1:8,0:8:20.84:152,21,0	0/0:2,0:2:6.02:0,6,120	0/0:4,0:4:6.02:0,6,120	0/0:8,0:8:18.06:0,18,359	0/0:19,0:19:54.19:0,54,1078	0/1:12,0:12:22.49:138,0,22	1/1:19,0:19:43.80:299,44,0	1/1:8,0:8:5.23:92,5,0
chr10	86053381	.	T	TTTA	4344.14	PASS	AB=0.979;AC=19;AF=0.339;AN=56;BaseQRankSum=4.447;DP=383;FS=8.039;HRun=0;HaplotypeScore=72.3998;InbreedingCoeff=0.6741;MQ=60.08;MQ0=10;MQRankSum=-2.316;QD=23.87;ReadPosRankSum=-0.557;VQSLOD=3.8846;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:15.72:16,0,95	0/0:5,0:5:12.03:0,12,132	0/1:26,0:9:11.49:11,0,69	0/0:26,0:12:18.90:0,19,195	0/0:20,0:20:45.03:0,45,657	0/0:14,0:14:39.12:0,39,596	1/1:6,0:5:3.34:21,3,0	1/1:8,30:39:93.63:1313,94,0	0/0:5,0:5:15.04:0,15,215	0/0:16,0:16:38.86:0,39,411	0/0:14,0:14:26.91:0,27,260	0/0:5,0:5:12.03:0,12,171	0/0:7,0:7:18.05:0,18,266	0/0:11,0:11:24.04:0,24,324	0/0:12,0:12:24.08:0,24,361	0/0:11,0:10:24.08:0,24,381	0/0:22,0:21:57.04:0,57,584	0/1:17,0:15:8.88:26,0,9	1/1:7,15:21:23.40:620,23,0	1/1:2,10:12:20.93:315,21,0	1/1:0,6:6:15.05:311,15,0	0/0:3,0:2:6.01:0,6,55	0/0:3,0:3:5.89:0,6,61	0/0:7,0:7:18.04:0,18,242	0/0:20,0:20:54.03:0,54,771	1/1:0,12:13:36.09:615,36,0	1/1:1,16:17:38.85:802,39,0	1/1:1,7:9:3.19:295,3,0
chr10	86053384	.	AT	A	713.45	PASS	AB=0.820;AC=8;AF=0.148;AN=54;BaseQRankSum=-1.871;DP=373;FS=5.589;HRun=11;HaplotypeScore=64.5576;InbreedingCoeff=0.6514;MQ=58.27;MQ0=13;MQRankSum=-0.204;QD=8.70;ReadPosRankSum=1.156;VQSLOD=2.3442;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:9.09:0,9,50	1/1:1,4:5:11.99:98,12,0	0/0:25,0:8:8.47:0,8,50	0/1:24,0:11:4.45:4,0,73	0/0:19,0:19:40.33:0,40,411	0/0:14,0:14:39.09:0,39,409	0/0:6,0:5:2.81:0,3,14	0/0:33,0:35:78.18:0,78,483	0/0:5,0:5:12.02:0,12,122	0/1:7,9:16:2.06:189,0,2	1/1:3,11:14:17.97:148,18,0	0/0:5,0:5:9.02:0,9,96	0/0:7,0:7:15.04:0,15,160	0/0:10,0:10:20.08:0,20,195	0/0:11,0:11:21.05:0,21,224	0/0:9,0:8:24.06:0,24,256	1/1:5,18:21:50.92:417,51,0	0/0:4,0:13:8.69:0,9,59	0/0:22,0:20:42.53:0,43,240	0/0:11,0:11:14.24:0,14,73	0/0:6,0:6:14.38:0,14,76	./.	0/0:2,0:3:5.84:0,6,40	0/0:7,0:7:12.03:0,12,126	0/0:19,1:21:23.31:0,23,437	0/0:13,0:13:28.80:0,29,163	0/0:17,0:17:40.38:0,40,228	0/0:10,0:10:17.35:0,17,97
chr10	86053701	.	C	CTTAT	9354.86	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-10.889;DP=523;FS=3.490;HRun=0;HaplotypeScore=76.8927;InbreedingCoeff=0.9799;MQ=57.76;MQ0=11;MQRankSum=-4.093;QD=43.11;ReadPosRankSum=-2.148;VQSLOD=4.7141;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,28:41:69.23:1623,69,0	0/0:4,0:4:9.03:0,9,152	0/0:11,0:8:20.43:0,20,310	0/0:15,0:8:9.03:0,9,132	0/0:25,0:25:59.33:0,59,1002	0/0:15,0:15:36.12:0,36,592	1/1:3,14:17:42.14:1025,42,0	1/1:19,14:32:60.18:1239,60,0	0/0:22,0:22:44.87:0,45,734	0/0:17,0:16:36.12:0,36,607	0/0:15,0:14:36.11:0,36,578	0/0:16,0:16:39.13:0,39,649	0/0:16,0:16:42.13:0,42,670	0/0:18,0:18:39.13:0,39,658	0/0:22,0:22:51.16:0,51,825	0/0:16,0:16:42.14:0,42,703	0/0:36,0:34:72.24:0,72,1178	1/1:3,14:17:30.10:746,30,0	1/1:16,9:25:51.15:986,51,0	1/1:5,10:14:30.07:673,30,0	1/1:3,10:12:24.08:597,24,0	0/0:11,0:11:26.91:0,27,430	0/0:16,0:16:42.14:0,42,699	0/0:19,0:19:42.14:0,42,703	0/0:12,0:12:24.08:0,24,405	1/1:3,14:18:48.15:1046,48,0	1/1:4,19:26:39.13:971,39,0	1/1:0,6:6:18.06:448,18,0
chr10	86054215	.	TG	T	2517.53	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.192;DP=625;FS=0.478;HRun=1;HaplotypeScore=65.1062;InbreedingCoeff=0.9952;MQ=90.77;MQ0=0;MQRankSum=-1.729;QD=35.96;ReadPosRankSum=1.921;VQSLOD=3.8836;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.33:0,96,1513	1/1:0,5:5:15.05:210,15,0	0/0:27,0:27:78.26:0,78,1192	0/0:27,0:26:65.54:0,66,1011	0/0:15,0:15:45.15:0,45,719	0/0:12,0:12:36.12:0,36,566	0/0:22,0:22:66.20:0,66,1003	0/0:32,0:31:96.31:0,96,1501	0/0:14,0:14:42.14:0,42,671	1/1:2,17:19:57.17:765,57,0	1/1:1,16:17:48.14:652,48,0	0/0:25,0:25:75.22:0,75,1162	0/0:25,0:25:75.26:0,75,1199	0/0:19,0:19:54.18:0,54,843	0/0:27,0:27:78.27:0,78,1234	0/0:31,0:31:93.31:0,93,1455	1/1:4,25:29:75.25:1049,75,0	0/0:13,0:13:39.13:0,39,623	0/0:26,0:26:78.26:0,78,1226	0/0:22,0:22:63.20:0,63,984	0/0:40,0:40:99:0,114,1765	0/0:22,0:22:66.21:0,66,1003	0/0:18,0:18:51.17:0,51,815	0/0:22,0:22:66.21:0,66,1016	0/0:16,0:16:48.14:0,48,732	0/0:23,1:24:27.26:0,27,1004	0/0:28,0:28:81.26:0,81,1257	0/0:16,0:16:48.16:0,48,746
chr10	86054308	.	AG	A	2823.61	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.827;DP=766;FS=0.408;HRun=5;HaplotypeScore=71.5029;InbreedingCoeff=0.9993;MQ=83.73;MQ0=0;MQRankSum=-1.453;QD=30.04;ReadPosRankSum=1.577;VQSLOD=4.2859;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,1759	1/1:0,10:10:30.09:340,30,0	0/0:36,0:36:81.94:0,82,1144	0/0:24,0:23:57.19:0,57,777	0/0:17,0:17:48.16:0,48,656	0/0:24,0:24:69.23:0,69,944	0/0:28,0:28:81.27:0,81,1101	0/0:38,0:38:99:0,102,1380	0/0:24,0:24:69.23:0,69,937	1/1:0,22:22:66.19:749,66,0	1/1:2,15:17:48.12:535,48,0	0/0:40,0:40:99:0,120,1639	0/0:22,0:22:63.21:0,63,862	0/0:26,0:26:78.26:0,78,1067	0/0:32,0:32:93.30:0,93,1256	0/0:33,0:33:99:0,99,1338	1/1:1,44:45:99:1361,120,0	0/0:21,0:21:60.20:0,60,819	0/0:30,0:30:81.24:0,81,1072	0/0:27,0:27:69.23:0,69,940	0/0:39,0:39:99:0,111,1482	0/0:27,0:27:68.91:0,69,891	0/0:20,0:20:60.20:0,60,816	0/0:48,0:48:99:0,138,1881	0/0:23,0:23:60.20:0,60,820	0/0:22,0:22:57.19:0,57,780	0/0:18,0:18:54.17:0,54,722	0/0:8,0:8:24.05:0,24,301
chr10	86054755	.	C	CAGTGGTTAAA	15681.25	PASS	AB=0.650;AC=13;AF=0.232;AN=56;BaseQRankSum=-7.880;DP=692;FS=8.359;HRun=0;HaplotypeScore=190.1609;InbreedingCoeff=0.8985;MQ=70.28;MQ0=0;MQRankSum=-13.679;QD=77.63;ReadPosRankSum=-5.497;VQSLOD=2.6112;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,3569	0/0:17,0:17:48.16:0,48,1495	0/0:22,0:22:40.91:0,41,1032	0/0:16,0:16:33.09:0,33,876	0/0:29,0:29:75.22:0,75,2250	0/0:18,0:18:48.16:0,48,1408	0/0:22,0:22:60.16:0,60,1659	1/1:32,11:49:72.21:2556,72,0	0/0:42,0:42:96.33:0,96,2937	0/0:35,0:35:90.31:0,90,2752	0/0:19,0:19:45.15:0,45,1315	0/0:31,0:31:90.29:0,90,2696	0/0:22,0:22:54.17:0,54,1550	0/0:18,0:18:42.14:0,42,1199	0/0:26,0:25:60.19:0,60,1757	0/0:19,0:19:45.15:0,45,1400	0/0:18,0:18:42.14:0,42,1308	0/0:15,0:15:42.14:0,42,1255	1/1:13,10:25:57.17:2396,57,0	1/1:13,13:26:48.16:1974,48,0	1/1:17,3:21:19.26:594,19,0	0/0:19,0:19:42.14:0,42,1289	0/0:21,0:21:60.21:0,60,1813	0/0:21,0:21:60.19:0,60,1746	0/0:19,0:19:48.15:0,48,1408	0/1:12,12:26:33.25:2319,0,33	1/1:9,19:30:57.03:2665,57,0	1/1:7,15:25:66.23:3178,66,0
chr10	86057287	.	G	GA	4066.11	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-12.393;DP=534;FS=4.188;HRun=7;HaplotypeScore=56.5916;InbreedingCoeff=0.9965;MQ=68.96;MQ0=2;MQRankSum=-1.371;QD=28.24;ReadPosRankSum=-1.490;VQSLOD=3.8625;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,985	0/0:11,0:11:30.05:0,30,290	0/0:25,0:18:18.39:0,18,284	0/0:20,0:14:19.23:0,19,254	0/0:21,0:21:60.08:0,60,574	0/0:24,0:24:72.12:0,72,695	0/0:21,0:21:54.07:0,54,517	1/1:1,16:17:48.15:580,48,0	0/0:14,0:14:42.07:0,42,406	0/0:20,0:20:54.08:0,54,519	0/0:12,0:12:27.04:0,27,261	0/0:21,0:21:57.08:0,57,545	0/0:16,0:16:36.04:0,36,341	0/0:15,0:15:35.98:0,36,332	0/0:18,0:18:45.06:0,45,435	0/0:11,0:11:27.04:0,27,261	0/0:16,0:16:48.08:0,48,463	0/0:16,0:16:42.02:0,42,396	1/1:5,17:22:48.15:579,48,0	1/1:4,18:21:51.16:616,51,0	1/1:2,12:14:36.09:422,36,0	0/0:15,0:15:42.07:0,42,405	0/0:20,0:20:60.10:0,60,579	0/0:22,0:22:54.03:0,54,511	0/0:14,0:14:33.04:0,33,317	1/1:2,32:34:93.27:1111,93,0	1/1:5,18:23:38.91:469,39,0	1/1:0,12:12:24.07:290,24,0
chr10	86059833	.	CAAAG	C	7774.36	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.392;DP=633;FS=0.349;HRun=0;HaplotypeScore=108.4337;InbreedingCoeff=0.9970;MQ=85.63;MQ0=0;MQRankSum=-5.621;QD=51.15;ReadPosRankSum=0.654;VQSLOD=5.3075;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,163,4295	0/0:15,0:15:45.15:0,45,1179	0/0:20,0:20:60.20:0,60,1416	0/0:24,0:24:42.52:0,43,1311	0/0:15,0:15:45.15:0,45,1214	0/0:19,0:19:57.20:0,57,1532	0/0:40,0:40:99:0,114,3076	1/1:2,19:21:54.13:926,54,0	0/0:16,0:16:48.16:0,48,1267	0/0:28,0:28:78.27:0,78,2092	0/0:23,0:23:63.22:0,63,1663	0/0:17,0:17:48.16:0,48,1296	0/0:10,0:10:30.10:0,30,810	0/0:14,0:14:39.13:0,39,1015	0/0:18,0:18:48.16:0,48,1296	0/0:21,0:21:63.20:0,63,1601	0/0:40,0:40:99:0,114,3036	0/0:27,0:27:78.27:0,78,2061	1/1:1,20:21:57.20:1075,57,0	1/1:0,19:19:51.17:943,51,0	1/1:0,40:39:99:1994,106,0	0/0:18,0:18:54.19:0,54,1434	0/0:14,0:14:39.13:0,39,1050	0/0:32,0:31:93.32:0,93,2491	0/0:13,0:13:39.13:0,39,1051	1/1:0,19:19:57.20:1082,57,0	1/1:0,27:27:78.27:1470,78,0	1/1:0,5:5:15.05:285,15,0
chr10	86060273	.	CT	C	284.03	PASS	AB=0.697;AC=10;AF=0.179;AN=56;BaseQRankSum=-0.805;DP=400;FS=5.589;HRun=17;HaplotypeScore=55.0743;InbreedingCoeff=0.3284;MQ=74.07;MQ0=3;MQRankSum=1.644;QD=3.64;ReadPosRankSum=3.228;VQSLOD=-0.1527;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:11.24:0,11,170	1/1:4,2:6:2.86:17,3,0	0/0:19,0:10:0:0,0,0	0/0:18,0:10:0:0,0,0	0/0:14,0:15:24.38:0,24,163	0/0:16,5:21:4.06:0,4,116	0/0:8,0:8:8.81:0,9,55	0/0:31,1:32:15.34:0,15,123	0/0:8,0:8:5.98:0,6,46	0/1:7,6:13:25.69:63,0,26	0/1:2,9:11:8.89:101,0,9	1/1:6,2:8:4.79:31,5,0	0/0:10,0:10:9.43:0,9,68	0/1:4,4:8:10.77:11,0,18	0/0:12,0:13:15.27:0,15,109	0/0:12,1:13:7.17:0,7,145	1/1:7,16:24:34.15:189,34,0	0/0:20,3:24:24.70:0,25,260	0/0:19,0:19:17.67:0,18,178	0/0:13,0:13:7.05:0,7,106	0/0:6,0:5:0.89:0,1,2	0/0:2,0:2:0:0,0,0	0/0:9,0:11:11.82:0,12,86	0/1:7,1:8:7.79:8,0,36	0/0:12,3:16:4.15:0,4,119	0/0:18,0:17:7.98:0,8,119	0/0:14,0:15:21.81:0,22,186	0/0:12,0:12:8.94:0,9,67
chr10	86060290	.	TA	T	917.08	PASS	AC=14;AF=0.269;AN=52;BaseQRankSum=1.928;DP=360;FS=14.685;HRun=3;HaplotypeScore=42.7002;InbreedingCoeff=0.8323;MQ=51.61;MQ0=12;MQRankSum=-6.550;QD=7.40;ReadPosRankSum=2.243;VQSLOD=-0.6245;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:27,3:30:39.02:278,39,0	0/0:3,0:3:5.03:0,5,30	./.	0/0:7,0:1:2.99:0,3,24	0/0:15,0:15:23.94:0,24,210	0/0:24,0:24:35.56:0,36,326	1/1:5,0:5:8.81:52,9,0	1/1:23,0:22:13.07:223,13,0	0/0:8,0:8:11.15:0,11,163	0/0:16,0:16:40.11:0,40,284	0/0:13,0:13:13.12:0,13,84	0/0:7,0:7:16.89:0,17,121	0/0:7,0:7:12.01:0,12,119	0/0:5,0:5:5.69:0,6,42	0/0:12,0:12:33:0,33,304	0/0:12,0:12:23.68:0,24,229	0/0:23,0:23:38.07:0,38,189	0/0:22,0:21:47.51:0,48,439	1/1:19,0:17:25.60:175,26,0	1/1:11,2:13:15.79:113,16,0	./.	0/0:3,0:3:8.99:0,9,76	0/0:8,0:8:15:0,15,143	0/0:5,0:5:8.60:0,9,67	0/0:15,0:15:38.24:0,38,313	1/1:17,0:16:26.41:166,26,0	0/0:12,0:12:0.52:0,1,2	1/1:17,0:17:12.86:92,13,0
chr10	86061629	.	CTGGGG	C	252.62	PASS	AB=0.571;AC=1;AF=0.019;AN=54;BaseQRankSum=1.493;DP=407;FS=1.760;HRun=0;HaplotypeScore=75.5520;InbreedingCoeff=0.1040;MQ=45.71;MQ0=13;MQRankSum=-0.170;QD=21.05;ReadPosRankSum=1.478;VQSLOD=3.0922;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.20:0,57,1829	./.	0/0:4,0:1:2.04:0,2,6	0/0:3,0:1:3.01:0,3,58	0/0:20,0:19:39.13:0,39,1288	0/0:5,0:5:12.04:0,12,399	0/0:16,0:15:42.09:0,42,1235	0/0:14,0:13:36.12:0,36,1096	0/0:8,0:8:24.08:0,24,785	0/0:21,0:21:57.20:0,57,1850	0/0:10,0:9:27.09:0,27,886	0/0:22,0:22:54.18:0,54,1675	0/0:12,0:12:30.10:0,30,977	0/0:5,0:5:12.04:0,12,348	0/0:16,0:16:48.16:0,48,1566	0/0:13,0:12:33.11:0,33,1066	0/0:26,0:25:69.24:0,69,2173	0/1:3,9:12:99:327,0,122	0/0:14,0:13:36.12:0,36,1106	0/0:21,0:19:42.14:0,42,1386	0/0:17,0:16:45.15:0,45,1404	0/0:20,0:19:42.14:0,42,1302	0/0:14,0:14:33.11:0,33,1065	0/0:14,0:13:23.77:0,24,754	0/0:17,0:17:45.15:0,45,1480	0/0:30,0:29:81.23:0,81,2445	0/0:17,0:17:42.14:0,42,1391	0/0:13,0:12:33.11:0,33,1070
chr10	86061733	.	GTGTC	G	3428.18	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=10.102;DP=523;FS=7.231;HRun=0;HaplotypeScore=87.3007;InbreedingCoeff=0.9981;MQ=70.19;MQ0=0;MQRankSum=-3.361;QD=30.07;ReadPosRankSum=2.169;VQSLOD=3.1362;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:87.30:0,87,2098	0/0:11,0:11:30.10:0,30,716	0/0:24,0:22:44.82:0,45,805	0/0:19,0:18:36.12:0,36,835	0/0:23,0:23:54.18:0,54,1290	0/0:22,0:22:54.18:0,54,1255	0/0:24,0:24:51.17:0,51,1171	1/1:10,12:21:30.10:497,30,0	0/0:12,0:12:30.10:0,30,710	0/0:16,0:16:36.12:0,36,855	0/0:16,0:16:36.12:0,36,824	0/0:15,0:15:39.13:0,39,954	0/0:14,0:14:33.11:0,33,775	0/0:7,0:7:21.06:0,21,441	0/0:17,0:17:39.13:0,39,958	0/0:24,0:24:57.19:0,57,1341	0/0:17,0:16:39.13:0,39,944	0/0:33,0:33:69.24:0,69,1695	1/1:4,7:11:24.05:327,24,0	1/1:4,17:21:48.10:764,48,0	1/1:9,19:28:45.15:746,45,0	0/0:21,0:21:42.13:0,42,908	0/0:20,0:20:57.20:0,57,1378	0/0:22,0:22:51.17:0,51,1207	0/0:17,0:17:51.18:0,51,1251	1/1:7,12:19:36.12:597,36,0	1/1:3,10:13:30.10:497,30,0	./.
chr10	86062459	.	AGC	A	2899.87	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=7.442;DP=508;FS=3.057;HRun=0;HaplotypeScore=75.1777;InbreedingCoeff=0.8400;MQ=63.14;MQ0=12;MQRankSum=0.167;QD=11.65;ReadPosRankSum=-1.414;VQSLOD=3.2315;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:23.83:0,24,179	1/1:4,0:4:8.75:73,9,0	0/0:26,0:14:27.73:0,28,307	0/1:31,0:12:10.31:10,0,97	0/0:15,0:14:17.77:0,18,129	0/0:18,0:18:1.80:0,2,193	0/0:23,0:22:44.75:0,45,313	1/1:5,22:27:62.13:486,62,0	0/0:16,0:16:23.85:0,24,194	1/1:21,0:21:35.76:273,36,0	1/1:4,8:12:2.63:19,3,0	0/0:26,0:26:52.68:0,53,368	0/0:10,0:10:23.71:0,24,168	0/0:10,0:9:11.91:0,12,87	0/0:12,0:11:14.77:0,15,78	0/0:13,0:13:29.53:0,30,202	1/1:25,0:24:18.01:296,18,0	0/0:14,0:14:34.94:0,35,225	1/1:29,0:29:55.63:455,56,0	1/1:7,6:11:8.87:57,9,0	1/1:24,0:23:56.75:445,57,0	0/0:18,0:17:33.50:0,33,249	0/0:13,0:13:12.02:0,12,76	0/0:19,0:19:38.34:0,38,250	0/0:13,0:13:23.87:0,24,183	1/1:13,0:13:11.65:205,12,0	1/1:21,0:21:35.17:273,35,0	1/1:29,0:28:68.04:520,68,0
chr10	86062461	.	C	CGA	1643.94	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=4.414;DP=490;FS=5.259;HRun=0;HaplotypeScore=87.4370;InbreedingCoeff=0.7054;MQ=65.28;MQ0=12;MQRankSum=2.443;QD=8.18;ReadPosRankSum=-2.664;VQSLOD=2.4073;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:9.58:0,10,58	1/1:5,0:5:12.01:161,12,0	0/0:27,0:15:42.50:0,43,529	0/0:31,0:12:0.28:0,0,198	0/0:14,0:13:17.89:0,18,229	0/0:17,0:17:14.92:0,15,447	0/0:24,0:23:11.21:0,11,38	1/1:26,0:26:23.72:106,24,0	0/0:16,0:16:29.93:0,30,423	1/1:4,15:20:47.24:554,47,0	1/1:10,0:10:2.72:19,3,0	0/0:23,0:23:54.09:0,54,718	0/0:10,0:10:24.08:0,24,327	0/0:10,0:9:12.04:0,12,166	0/0:13,0:12:18.04:0,18,212	0/0:13,0:13:30.10:0,30,417	1/1:23,0:22:51.17:728,51,0	0/0:14,0:14:35.93:0,36,444	0/1:25,0:25:18.12:56,0,18	1/1:10,0:8:2.96:20,3,0	1/1:23,0:22:7.70:35,8,0	0/0:20,0:19:39.05:0,39,513	0/0:12,0:12:14.98:0,15,176	0/0:18,0:18:39.13:0,39,524	0/0:13,0:13:24.08:0,24,338	1/1:15,0:15:6.87:39,7,0	0/1:16,0:16:5.98:22,0,6	1/1:28,0:27:8.69:98,9,0
chr10	86067847	.	ATCG	A	6716.21	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.730;DP=654;FS=14.816;HRun=0;HaplotypeScore=107.0723;InbreedingCoeff=0.9952;MQ=85.32;MQ0=1;MQRankSum=-7.026;QD=42.51;ReadPosRankSum=0.912;VQSLOD=5.7979;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,132,2919	0/0:10,0:10:23.98:0,24,543	0/0:35,0:33:83.98:0,84,1899	0/0:28,0:28:76.81:0,77,1485	0/0:18,0:18:48.16:0,48,1066	0/0:19,0:19:54.19:0,54,1218	0/0:28,0:28:81.23:0,81,1669	1/1:2,35:37:99:1714,105,0	0/0:21,0:21:60.21:0,60,1348	0/0:29,0:29:84.29:0,84,1867	0/0:7,0:7:18.06:0,18,405	0/0:29,0:29:87.28:0,87,1895	0/0:24,0:24:69.24:0,69,1552	0/0:28,0:28:81.28:0,81,1805	0/0:17,0:17:48.16:0,48,1087	0/0:13,0:13:39.13:0,39,860	0/0:36,0:36:99:0,105,2370	0/0:29,0:29:87.30:0,87,1916	1/1:3,15:18:45.15:740,45,0	1/1:1,11:12:33.11:527,33,0	1/1:3,26:29:54.18:899,54,0	0/0:20,0:20:57.20:0,57,1258	0/0:19,0:19:51.17:0,51,1125	0/0:25,0:24:69.24:0,69,1507	0/0:13,0:13:36.12:0,36,815	1/1:2,31:33:96.33:1599,96,0	1/1:1,21:22:60.20:988,60,0	1/1:0,7:7:15.05:250,15,0
chr10	86067861	.	G	GGTTT	3400.40	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-10.459;DP=658;FS=1.192;HRun=0;HaplotypeScore=134.9823;InbreedingCoeff=0.7825;MQ=73.47;MQ0=2;MQRankSum=0.083;QD=28.34;ReadPosRankSum=-1.254;VQSLOD=3.1431;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,39:58:99:2385,99,0	0/0:9,0:9:24.08:0,24,385	0/1:36,0:31:2.64:3,0,386	0/0:29,0:30:38.63:0,39,492	0/0:17,0:17:27.06:0,27,387	0/0:21,0:21:48.16:0,48,773	1/1:11,15:26:42.14:1013,42,0	0/0:38,0:38:33.03:0,33,416	0/0:20,0:20:39.12:0,39,604	0/0:24,0:25:51.17:0,51,800	0/0:5,0:5:5.95:0,6,89	0/0:31,0:31:72.20:0,72,1069	0/0:26,0:27:63.21:0,63,978	0/0:26,0:26:66.22:0,66,1041	0/0:18,0:18:36.11:0,36,556	0/0:14,0:14:30.09:0,30,452	0/0:37,0:37:84.29:0,84,1343	0/0:29,0:29:69.14:0,69,1033	0/0:16,0:16:33.11:0,33,531	0/0:11,0:12:27:0,27,361	0/0:29,0:29:41.98:0,42,599	0/0:15,0:16:30.10:0,30,463	0/0:18,0:18:36.05:0,36,505	0/0:24,0:24:60.18:0,60,921	0/0:13,0:13:18.05:0,18,268	0/0:33,0:33:63.21:0,63,1014	0/0:23,0:23:45:0,45,638	0/0:6,0:6:9.02:0,9,121
chr10	86068984	.	TA	T	3572.59	PASS	AB=0.770;AC=20;AF=0.357;AN=56;BaseQRankSum=7.102;DP=621;FS=10.668;HRun=13;HaplotypeScore=78.3104;InbreedingCoeff=0.5940;MQ=71.09;MQ0=0;MQRankSum=-0.748;QD=11.41;ReadPosRankSum=4.539;VQSLOD=2.5908;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,32:40:63.41:601,63,0	0/0:10,0:10:27.01:0,27,251	0/0:30,0:24:9.43:0,9,219	0/1:28,0:20:15:15,0,93	0/0:26,0:26:56.65:0,57,520	0/0:16,0:16:36.03:0,36,336	1/1:8,25:35:16.30:396,16,0	1/1:7,16:24:49.69:352,50,0	0/0:20,0:20:45.90:0,46,417	0/0:23,0:23:54.01:0,54,500	0/0:19,0:19:48.01:0,48,448	0/0:23,0:23:48.02:0,48,444	0/0:18,0:20:41.89:0,42,389	0/0:17,0:17:29.69:0,30,261	0/0:31,3:34:47.09:0,47,579	0/1:13,2:15:8.06:8,0,221	0/1:15,3:19:26.55:27,0,253	0/1:10,28:38:6.76:552,0,7	0/1:9,7:17:6.70:124,0,7	0/1:6,10:16:2.41:148,0,2	1/1:3,14:18:20.24:267,20,0	0/0:10,0:11:18.74:0,19,158	0/0:18,1:19:17.07:0,17,308	0/0:23,1:24:46.67:0,47,526	0/0:14,0:14:36.05:0,36,346	1/1:3,20:24:58.68:422,59,0	1/1:3,25:30:46.49:486,46,0	1/1:1,8:9:23.86:175,24,0
chr10	86069702	.	G	GAA	409.57	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=6.588;DP=548;FS=6.826;HRun=9;HaplotypeScore=65.8648;InbreedingCoeff=0.6780;MQ=57.71;MQ0=13;MQRankSum=-4.779;QD=8.71;ReadPosRankSum=-0.566;VQSLOD=0.0705;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:99:0,126,1499	0/0:4,0:4:12.04:0,12,146	0/0:14,0:3:5.82:0,6,52	0/1:22,0:6:0.79:1,0,91	0/0:28,0:28:66.15:0,66,771	0/0:17,0:17:45.14:0,45,548	0/0:12,0:12:33.09:0,33,388	0/0:24,0:22:53.83:0,54,628	0/0:13,0:13:30.03:0,30,347	0/0:19,0:19:48.13:0,48,572	0/0:18,0:17:33.10:0,33,398	0/0:7,0:6:17.98:0,18,188	0/0:11,0:11:24.07:0,24,292	0/0:15,0:14:39:0,39,442	0/0:15,0:14:39.10:0,39,457	0/0:19,0:19:57.10:0,57,664	0/0:38,0:36:93.09:0,93,1099	1/1:20,4:22:45.84:504,46,0	0/0:25,0:25:60.16:0,60,717	0/0:15,0:15:39.05:0,39,442	0/0:24,0:23:60.18:0,60,729	0/0:8,0:8:18.04:0,18,208	0/0:19,0:19:50.48:0,50,565	0/0:23,0:23:60.15:0,60,705	0/0:18,0:18:45.10:0,45,522	0/0:28,0:27:72.21:0,72,867	0/0:36,0:36:97.14:0,97,1127	0/0:5,0:5:15.05:0,15,183
chr10	86071689	.	T	TA	934.81	PASS	AB=0.951;AC=8;AF=0.143;AN=56;BaseQRankSum=-0.312;DP=611;FS=2.483;HRun=13;HaplotypeScore=103.7464;InbreedingCoeff=0.4017;MQ=71.96;MQ0=1;MQRankSum=-1.335;QD=5.74;ReadPosRankSum=-2.196;VQSLOD=2.2911;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:20,20:41:30.87:638,31,0	0/0:11,0:11:26.73:0,27,185	0/1:29,0:21:15.85:16,0,97	0/0:26,0:20:6.32:0,6,78	0/0:25,0:25:49.21:0,49,326	0/0:21,0:23:33.70:0,34,217	1/1:9,14:23:12.91:392,13,0	0/0:29,0:31:38.53:0,39,373	0/0:23,5:28:7.53:0,8,194	0/0:25,0:26:40.45:0,40,269	0/0:12,0:13:31.75:0,32,208	0/0:8,0:11:21.88:0,22,134	0/0:17,0:16:21.99:0,22,145	0/0:23,0:23:35.47:0,35,246	0/0:21,0:21:35.56:0,36,242	0/0:12,0:12:25.76:0,26,170	0/0:30,1:31:37.42:0,37,402	0/0:3,0:17:26.94:0,27,78	0/0:16,0:16:26.62:0,27,181	0/0:13,0:13:20.55:0,21,137	0/1:15,1:16:10.15:10,0,80	0/1:22,3:26:13.36:13,0,187	0/0:8,0:8:14.61:0,15,95	0/0:36,0:36:76.12:0,76,523	0/0:19,0:19:13.75:0,14,220	0/0:26,0:29:41.56:0,42,263	0/1:25,1:27:5.09:5,0,224	0/0:12,0:12:23.76:0,24,164
chr10	86071718	.	CA	C	442.34	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.411;DP=587;FS=0.871;HRun=4;HaplotypeScore=95.5822;InbreedingCoeff=0.9130;MQ=57.64;MQ0=14;MQRankSum=-3.397;QD=20.11;ReadPosRankSum=-0.370;VQSLOD=2.7135;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:97:0,97,883	0/0:9,0:9:27.08:0,27,360	0/0:33,0:15:40.86:0,41,511	0/0:29,0:10:10.67:0,11,157	0/0:28,0:28:81.23:0,81,1089	0/0:13,0:13:33.11:0,33,456	0/0:16,0:16:40.80:0,41,364	0/0:29,0:29:74.08:0,74,903	0/0:25,0:24:57.17:0,57,773	0/0:29,0:29:84.28:0,84,1168	0/0:13,0:13:36.12:0,36,502	0/0:9,0:8:21.07:0,21,293	0/0:15,0:14:39.12:0,39,527	0/0:24,0:24:63.21:0,63,878	0/0:22,0:22:66.22:0,66,923	0/0:16,0:16:48.16:0,48,671	0/0:28,0:28:75.19:0,75,1006	1/1:9,13:22:50.60:537,51,0	0/0:25,0:25:61.20:0,61,539	0/0:11,0:11:32.08:0,32,264	0/0:14,0:13:28.60:0,29,217	0/0:16,0:16:48.16:0,48,666	0/0:5,0:5:12.04:0,12,167	0/0:35,0:35:99:0,99,1363	0/0:16,1:17:14.94:0,15,591	0/0:23,0:21:57.83:0,58,399	0/0:30,0:30:60.66:0,61,479	0/0:11,0:11:31.37:0,31,169
chr10	86071739	.	CAAACA	C	6712.23	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=9.397;DP=595;FS=0.752;HRun=0;HaplotypeScore=117.3158;InbreedingCoeff=0.9560;MQ=63.95;MQ0=9;MQRankSum=-4.120;QD=33.90;ReadPosRankSum=-1.032;VQSLOD=4.0218;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,28:34:66.10:1185,66,0	0/0:12,0:12:33.10:0,33,772	0/0:29,0:20:27.54:0,28,453	0/0:36,0:14:14.16:0,14,182	0/0:29,0:29:83.27:0,83,1770	0/0:17,0:16:48.11:0,48,965	1/1:13,5:18:50.92:691,51,0	1/1:21,1:21:23.70:465,24,0	0/0:27,0:26:64.45:0,64,1454	0/0:26,0:26:78.25:0,78,1826	0/0:15,0:15:42.13:0,42,907	0/0:7,0:7:15.05:0,15,342	0/0:13,0:13:39.10:0,39,676	0/0:21,0:21:57.17:0,57,1403	0/0:23,0:23:63.19:0,63,1618	0/0:21,0:21:63.15:0,63,1372	0/0:25,0:25:72.21:0,72,1629	0/0:20,0:20:0.71:0,1,163	1/1:5,18:23:42.34:673,42,0	1/1:0,11:11:33.05:529,33,0	1/1:2,22:23:21.07:436,21,0	0/0:19,0:19:57.17:0,57,1261	0/0:8,0:8:24.05:0,24,413	0/0:34,0:34:99:0,102,2413	0/0:13,0:13:39.13:0,39,969	1/1:1,23:24:69.10:1136,69,0	1/1:1,27:28:41.29:885,41,0	1/1:5,9:14:41.09:711,41,0
chr10	86071742	.	AC	A	2424.92	PASS	AB=0.950;AC=21;AF=0.375;AN=56;BaseQRankSum=14.364;DP=593;FS=1.630;HRun=1;HaplotypeScore=91.0641;InbreedingCoeff=0.9394;MQ=69.34;MQ0=8;MQRankSum=-4.832;QD=9.86;ReadPosRankSum=0.078;VQSLOD=1.2483;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:64.78:429,65,0	0/0:12,0:12:30.81:0,31,393	0/0:32,1:24:42.96:0,43,386	0/1:36,2:16:3.52:4,0,132	0/0:30,0:30:76.84:0,77,924	0/0:18,0:17:50.40:0,50,518	1/1:17,0:17:36.70:203,37,0	1/1:21,0:20:29.94:190,30,0	0/0:28,0:27:44.18:0,44,655	0/0:26,0:26:69.60:0,70,797	0/0:14,0:14:42.02:0,42,462	0/0:7,0:7:14.94:0,15,155	0/0:13,0:13:12.83:0,13,317	0/0:20,0:20:53.54:0,54,646	0/0:23,0:23:63.04:0,63,732	0/0:22,0:22:60.95:0,61,720	0/0:25,0:25:75.18:0,75,880	1/1:13,7:20:31.17:370,31,0	1/1:20,0:20:48.56:297,49,0	1/1:11,0:11:31.11:185,31,0	1/1:23,0:22:20.63:130,21,0	0/0:19,0:19:54.93:0,55,610	0/0:8,0:8:24.01:0,24,246	0/0:36,0:36:99:0,105,1196	0/0:13,0:13:35.21:0,35,449	1/1:24,0:24:56.75:352,57,0	1/1:27,0:27:41.01:272,41,0	1/1:14,0:14:27.63:212,28,0
chr10	86071743	.	CA	C	2046.05	PASS	AB=0.908;AC=21;AF=0.375;AN=56;BaseQRankSum=12.931;DP=598;FS=1.677;HRun=10;HaplotypeScore=93.2195;InbreedingCoeff=0.7795;MQ=71.35;MQ0=8;MQRankSum=-4.548;QD=8.39;ReadPosRankSum=1.172;VQSLOD=2.4381;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:49.52:257,50,0	0/0:12,0:12:30.07:0,30,325	0/0:36,1:27:41.09:0,41,408	0/0:37,1:16:17.17:0,17,200	0/0:29,0:31:49.29:0,49,738	0/0:18,0:17:42.11:0,42,464	1/1:8,9:17:39.49:302,39,0	1/1:6,12:17:30.78:293,31,0	0/0:28,0:27:61.38:0,61,647	0/1:22,4:26:32.03:32,0,591	0/0:14,0:14:36.10:0,36,398	0/0:7,0:7:15.02:0,15,151	0/1:10,2:12:18.91:19,0,253	0/0:18,2:20:25.08:0,25,505	0/0:23,0:25:59.94:0,60,611	0/0:22,0:22:60.15:0,60,656	0/0:25,0:25:72.18:0,72,787	0/1:10,0:20:6.84:86,0,7	1/1:20,0:20:18.22:205,18,0	1/1:11,0:11:27.32:167,27,0	1/1:23,0:22:20.13:116,20,0	0/0:18,0:19:47.95:0,48,504	0/0:8,0:8:21.02:0,21,218	0/0:36,0:36:99:0,99,1076	0/0:13,0:13:36.10:0,36,398	1/1:24,0:24:59.62:374,60,0	1/1:27,0:27:39.97:207,40,0	1/1:10,3:14:36.48:201,36,0
chr10	86071868	.	AGG	A	3795.51	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=12.935;DP=564;FS=1.621;HRun=9;HaplotypeScore=82.8547;InbreedingCoeff=0.9444;MQ=78.86;MQ0=0;MQRankSum=-2.069;QD=16.43;ReadPosRankSum=1.439;VQSLOD=2.0470;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,43:49:99:1153,99,0	0/0:7,0:7:18.03:0,18,265	0/0:20,0:21:45.86:0,46,741	0/0:14,0:14:30.07:0,30,427	0/0:20,0:20:45.15:0,45,729	0/0:22,0:22:63.22:0,63,1033	1/1:6,13:19:33.09:385,33,0	1/1:26,0:26:29.14:281,29,0	0/0:22,0:23:56.67:0,57,871	0/0:21,0:21:33.11:0,33,541	0/0:14,0:15:30.10:0,30,490	0/0:15,0:15:42.13:0,42,665	0/0:15,0:16:35.61:0,36,550	0/0:18,0:18:42.14:0,42,687	0/0:17,0:17:45.15:0,45,734	0/0:16,0:16:42.14:0,42,687	0/0:33,0:34:89.79:0,90,1435	1/1:3,15:18:39.11:455,39,0	0/1:23,0:23:1.02:196,0,1	1/1:21,0:22:50.18:339,50,0	1/1:19,0:19:20.45:231,20,0	0/0:12,0:12:33.10:0,33,517	0/0:23,0:24:44.13:0,44,696	0/0:21,0:21:54.18:0,54,876	0/0:16,0:17:38.60:0,39,552	1/1:27,0:27:55.86:357,56,0	1/1:23,0:23:30.67:339,31,0	1/1:5,0:5:8.90:60,9,0
chr10	86071876	.	GGA	G	5545.66	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=11.906;DP=519;FS=1.093;HRun=0;HaplotypeScore=71.4824;InbreedingCoeff=0.8237;MQ=77.81;MQ0=0;MQRankSum=1.389;QD=24.76;ReadPosRankSum=0.634;VQSLOD=5.3422;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:50,0:50:62.55:301,0,63	0/0:6,0:6:18.06:0,18,329	0/0:21,0:21:43.86:0,44,839	0/0:10,0:10:29.90:0,30,469	0/0:19,0:19:57.15:0,57,917	0/0:22,0:22:66.22:0,66,1206	0/1:15,0:15:18.17:85,0,18	1/1:1,24:25:75.16:958,75,0	0/0:19,0:19:56.92:0,57,1001	0/0:16,0:16:48.09:0,48,763	0/0:12,0:12:36.06:0,36,600	0/0:14,0:14:42.13:0,42,761	0/0:13,0:13:33.03:0,33,630	0/0:16,0:16:45.14:0,45,795	0/0:16,0:16:48.16:0,48,855	0/0:17,0:17:51.15:0,51,850	0/0:32,0:32:96.11:0,96,1668	1/1:16,0:16:14.89:117,15,0	1/1:1,26:27:75.03:873,75,0	1/1:3,21:24:65.96:832,66,0	1/1:1,14:15:42.13:612,42,0	0/0:11,0:11:30.10:0,30,558	0/0:19,0:19:44.97:0,45,760	0/0:19,0:19:54.13:0,54,945	0/0:13,0:13:32.94:0,33,582	1/1:1,19:20:60.19:851,60,0	1/1:0,22:22:54.18:786,54,0	1/1:0,10:10:9.03:131,9,0
chr10	86071877	.	GAA	G	1896.79	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.876;DP=517;FS=0.000;HRun=3;HaplotypeScore=84.1454;InbreedingCoeff=0.9855;MQ=77.87;MQ0=0;MQRankSum=-3.791;QD=13.45;ReadPosRankSum=1.230;VQSLOD=0.5394;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,104,820	0/0:6,0:6:18.06:0,18,328	0/0:19,0:21:30.64:0,31,802	0/0:10,0:10:30.06:0,30,492	0/0:19,0:19:57.19:0,57,1003	0/0:22,0:22:66.23:0,66,1188	0/0:15,0:15:36.29:0,36,263	1/1:24,1:25:51.69:369,52,0	0/0:20,0:20:60.18:0,60,1042	0/0:17,0:17:51.17:0,51,914	0/0:12,0:12:36.12:0,36,627	0/0:14,0:14:42.14:0,42,759	0/0:14,0:14:41.48:0,41,662	0/0:16,0:16:45.13:0,45,784	0/0:16,0:16:48.15:0,48,838	0/0:17,0:17:51.16:0,51,891	0/0:32,0:32:96.30:0,96,1655	0/0:17,0:17:41.75:0,42,250	1/1:26,0:25:18.04:206,18,0	1/1:22,2:24:31.29:406,31,0	1/1:14,0:14:41.23:278,41,0	0/0:10,0:10:30.10:0,30,542	0/0:18,0:18:45.62:0,46,782	0/0:18,0:18:48.16:0,48,860	0/0:11,0:11:33.11:0,33,587	1/1:19,1:20:55.29:404,55,0	1/1:22,0:22:53.28:374,53,0	1/1:10,0:10:8.84:55,9,0
chr10	86074485	.	T	TG	14040.38	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=19.095;DP=655;FS=2.834;HRun=1;HaplotypeScore=89.1243;InbreedingCoeff=0.9936;MQ=78.07;MQ0=0;MQRankSum=-3.008;QD=41.17;ReadPosRankSum=1.205;VQSLOD=5.2866;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,52:52:99:2236,151,0	1/1:0,6:6:15.05:212,15,0	0/0:22,0:22:66.17:0,66,859	0/0:16,0:16:48.10:0,48,601	0/0:21,0:21:60.20:0,60,837	0/0:15,0:15:45.15:0,45,629	1/1:0,29:29:78.26:1165,78,0	1/1:0,20:20:57.17:815,57,0	0/0:22,0:22:66.22:0,66,923	1/1:1,22:24:69.23:1015,69,0	1/1:0,14:14:39.13:583,39,0	0/0:23,0:23:69.23:0,69,965	0/0:18,0:18:54.18:0,54,752	0/0:25,0:25:75.24:0,75,1028	0/0:27,0:27:81.27:0,81,1133	0/0:32,0:32:96.30:0,96,1309	1/1:0,25:25:72.24:1067,72,0	1/1:1,25:26:69.23:1027,69,0	1/1:0,16:16:45.14:647,45,0	1/1:0,25:25:66.22:981,66,0	1/1:0,47:47:99:1971,132,0	0/0:27,0:27:81.26:0,81,1116	0/0:13,0:13:39.13:0,39,542	0/0:35,0:35:99:0,102,1427	0/0:18,0:18:48.14:0,48,650	1/1:2,29:31:87.29:1293,87,0	1/1:1,21:22:57.19:850,57,0	1/1:0,4:4:12.04:179,12,0
chr10	86076178	.	G	GCA	1244.43	PASS	AB=0.837;AC=15;AF=0.300;AN=50;BaseQRankSum=-2.971;DP=622;FS=0.718;HRun=0;HaplotypeScore=110.8994;InbreedingCoeff=-0.1527;MQ=65.32;MQ0=11;MQRankSum=2.277;QD=4.07;ReadPosRankSum=-1.055;VQSLOD=2.3805;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:35,0:18:0:0,0,0	./.	0/0:6,0:17:1.71:0,2,22	0/1:8,2:12:13.21:97,0,13	0/0:32,0:39:5.34:0,5,23	1/1:25,0:25:5.51:48,6,0	0/1:13,9:24:99:150,0,105	0/0:14,0:20:7.11:0,7,59	0/0:2,0:8:5.68:0,6,28	0/0:28,1:31:3.72:0,4,421	0/0:17,0:19:17.82:0,18,148	0/0:18,0:21:11.86:0,12,111	0/1:14,9:24:11.33:245,0,11	0/1:11,4:17:52.43:76,0,52	0/0:13,0:26:8.52:0,9,42	0/0:8,0:17:8.52:0,9,42	0/1:12,1:13:16.88:103,0,17	1/1:6,4:11:3.01:44,3,0	0/1:42,6:52:51.37:51,0,95	0/0:21,0:22:11.86:0,12,111	0/1:11,6:18:35.42:35,0,38	0/1:37,6:44:72.90:411,0,73	0/0:17,0:17:9.01:0,9,89	0/1:13,0:12:14.83:47,0,15	0/1:14,3:17:51.96:76,0,52	0/0:7,0:7:2.96:0,3,20
chr10	86076888	.	TAC	T	594.83	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.933;DP=1091;FS=4.517;HRun=0;HaplotypeScore=146.5568;InbreedingCoeff=0.9959;MQ=55.85;MQ0=6;MQRankSum=1.889;QD=18.59;ReadPosRankSum=2.352;VQSLOD=3.9927;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:90.45:0,90,1482	0/0:7,0:7:21.06:0,21,340	0/0:57,0:30:69.04:0,69,1019	0/0:60,1:30:84.03:0,84,1178	0/0:26,0:26:75.21:0,75,1178	0/0:32,0:32:87.28:0,87,1458	0/0:41,0:40:99:0,105,1783	0/0:45,0:45:99:0,111,1781	0/0:40,0:40:99:0,114,1996	0/0:38,0:38:99:0,108,1817	0/0:30,0:30:90.30:0,90,1538	0/0:45,0:45:99:0,123,2066	0/0:42,0:42:99:0,125,2079	0/0:39,0:39:99:0,105,1749	0/0:46,0:46:99:0,130,2220	0/0:43,0:43:99:0,117,1952	0/0:31,0:30:80.69:0,81,1256	1/1:3,29:32:51.17:690,51,0	0/0:15,0:14:42.09:0,42,691	0/0:30,0:30:81.28:0,81,1410	0/0:114,1:115:99:0,285,4887	0/0:25,0:25:72.09:0,72,1194	0/0:25,0:25:72.23:0,72,1228	0/0:52,0:52:99:0,126,2139	0/0:34,0:34:87.17:0,87,1403	0/0:46,0:46:99:0,126,2161	0/0:29,0:29:72.25:0,72,1233	0/0:19,0:19:54.18:0,54,945
chr10	86078534	.	CCTATGT	C	3026.12	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=12.094;DP=561;FS=6.510;HRun=0;HaplotypeScore=125.4478;InbreedingCoeff=0.8763;MQ=67.53;MQ0=3;MQRankSum=-3.392;QD=21.01;ReadPosRankSum=-0.509;VQSLOD=2.9511;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:5.71:71,6,0	0/0:3,0:3:9.03:0,9,310	0/0:26,0:26:72.22:0,72,1547	0/0:36,0:28:49.34:0,49,1092	0/0:16,0:16:45.15:0,45,1246	0/0:15,0:15:45.13:0,45,1181	./.	1/1:2,14:16:42.06:663,42,0	0/0:18,0:18:42.14:0,42,1158	0/0:26,0:26:78.27:0,78,2192	0/0:12,0:12:33.11:0,33,986	0/0:20,0:20:57.20:0,57,1638	0/0:16,0:16:48.16:0,48,1371	0/0:18,0:18:54.19:0,54,1621	0/0:28,0:28:78.21:0,78,2111	0/0:24,0:24:69.22:0,69,1939	0/0:34,0:34:93.28:0,93,2666	0/0:13,0:13:6.19:0,6,323	1/1:11,0:11:21.05:353,21,0	1/1:9,0:9:8.56:44,9,0	0/1:35,0:35:0:0,0,0	0/0:24,0:24:66.23:0,66,1893	0/0:13,0:13:36.11:0,36,933	0/0:30,0:30:87.26:0,87,2389	0/0:16,0:16:48.14:0,48,1229	1/1:26,0:26:8.04:1394,8,0	1/1:17,0:17:33.11:580,33,0	1/1:4,0:4:6.02:99,6,0
chr10	86078537	.	ATGTCTATGTCTGTG	A	5188.46	PASS	AB=0.540;AC=14;AF=0.259;AN=54;BaseQRankSum=11.748;DP=579;FS=5.479;HRun=0;HaplotypeScore=200.4020;InbreedingCoeff=0.8083;MQ=67.00;MQ0=3;MQRankSum=-2.542;QD=36.03;ReadPosRankSum=-0.115;VQSLOD=3.7812;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:6.02:147,6,0	0/0:3,0:3:9.03:0,9,627	0/0:29,0:26:72.22:0,72,1641	0/0:37,0:27:47.06:0,47,1263	0/0:17,0:17:48.16:0,48,2344	0/0:16,0:16:48.14:0,48,2054	./.	1/1:16,0:16:42.06:663,42,0	0/0:21,0:21:51.18:0,51,2591	0/0:28,0:27:81.28:0,81,3647	0/0:12,0:12:33.11:0,33,1710	0/0:20,0:20:57.20:0,57,2667	0/0:17,0:17:51.18:0,51,2469	0/0:18,0:18:54.19:0,54,3097	0/0:29,0:29:81.22:0,81,3749	0/0:25,0:25:72.23:0,72,3284	0/0:35,0:35:96.33:0,96,5261	0/0:14,0:14:34.04:0,34,601	1/1:1,8:9:21.05:428,21,0	1/1:1,10:11:9.03:269,9,0	0/1:7,26:33:0:0,0,0	0/0:25,0:25:69.24:0,69,3271	0/0:13,0:13:36.11:0,36,1322	0/0:31,0:31:90.27:0,90,4088	0/0:17,0:17:51.15:0,51,2147	0/1:2,24:26:18.23:2086,0,18	1/1:1,18:19:33.58:1345,34,0	1/1:0,4:4:6.02:250,6,0
chr10	86079799	.	AC	A	653.26	PASS	AC=6;AF=0.188;AN=32;BaseQRankSum=0.443;DP=55;FS=20.717;HRun=3;HaplotypeScore=13.2242;InbreedingCoeff=0.4386;MQ=72.69;MQ0=1;MQRankSum=2.100;QD=28.40;ReadPosRankSum=2.327;VQSLOD=1.4345;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:48.97:577,49,0	./.	0/0:6,0:5:12.04:0,12,159	0/0:5,0:3:4.25:0,4,33	0/0:1,0:1:3.01:0,3,43	./.	1/1:0,2:2:6.02:74,6,0	0/0:2,0:2:6.02:0,6,86	./.	0/0:1,0:1:3.01:0,3,42	./.	0/0:2,0:2:3.01:0,3,38	0/0:1,0:1:3.01:0,3,43	./.	./.	./.	0/0:3,0:3:6.02:0,6,86	1/1:0,4:4:9.03:112,9,0	0/0:5,0:4:12.04:0,12,167	0/0:1,0:1:3.01:0,3,43	0/0:2,0:2:6.02:0,6,86	./.	./.	0/0:1,0:1:3:0,3,29	0/0:1,0:1:3.01:0,3,42	./.	./.	./.
chr10	86080311	.	GA	G	939.74	PASS	AB=0.831;AC=14;AF=0.250;AN=56;BaseQRankSum=0.928;DP=496;FS=9.428;HRun=15;HaplotypeScore=61.7882;InbreedingCoeff=0.7198;MQ=54.92;MQ0=9;MQRankSum=4.016;QD=5.87;ReadPosRankSum=3.974;VQSLOD=1.8744;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,13:26:22.70:262,23,0	1/1:1,7:8:14.76:96,15,0	0/0:20,0:3:2.74:0,3,12	0/0:17,0:6:7.88:0,8,83	0/1:23,1:26:2.16:2,0,149	0/0:2,0:2:5.99:0,6,49	1/1:3,15:18:13.16:157,13,0	0/0:13,0:16:17.62:0,18,194	0/0:16,2:18:10.72:0,11,215	1/1:11,16:29:21.99:253,22,0	1/1:5,10:15:14.61:96,15,0	0/0:11,0:11:7.29:0,7,174	0/0:15,1:15:13.47:0,13,202	0/0:14,0:14:4.80:0,5,159	0/0:27,4:32:23.62:0,24,479	0/0:12,1:13:13.70:0,14,231	1/1:5,14:22:41.40:248,41,0	0/0:18,1:19:22.07:0,22,297	0/0:9,0:11:23.32:0,23,153	0/0:10,0:21:30.33:0,30,175	0/0:5,0:8:5.68:0,6,28	0/1:9,3:13:5.07:5,0,109	0/0:14,2:17:13.48:0,13,217	0/0:19,5:24:25.72:0,26,350	0/0:12,0:12:23.92:0,24,197	0/0:18,2:24:18.89:0,19,209	0/0:7,0:24:31.59:0,32,180	0/0:5,0:14:22.71:0,23,120
chr10	86080640	.	GTT	G	3986.86	PASS	AB=0.783;AC=24;AF=0.429;AN=56;BaseQRankSum=5.291;DP=552;FS=5.996;HRun=14;HaplotypeScore=75.8572;InbreedingCoeff=0.8728;MQ=71.48;MQ0=0;MQRankSum=-0.955;QD=16.82;ReadPosRankSum=0.389;VQSLOD=2.8413;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:42:66.10:0,66,319	1/1:1,8:9:14.96:139,15,0	0/0:26,0:20:22.22:0,22,274	0/1:14,0:14:3.37:3,0,163	0/0:16,0:23:55.11:0,55,618	0/0:36,0:38:99:0,99,1296	0/1:4,3:17:45.34:45,0,105	1/1:10,23:34:62.83:625,63,0	0/0:13,0:13:36.11:0,36,487	1/1:5,16:21:44.93:416,45,0	1/1:3,12:15:26.97:250,27,0	0/0:15,0:16:41.61:0,42,537	0/0:18,0:18:36.09:0,36,468	0/0:17,0:19:45.10:0,45,607	0/0:19,0:23:52.59:0,53,591	0/0:17,0:17:39.11:0,39,516	1/1:3,14:17:39.03:361,39,0	0/0:1,0:15:30.06:0,30,305	1/1:5,12:17:39.02:358,39,0	1/1:1,14:17:32.19:383,32,0	1/1:7,9:16:20.98:194,21,0	0/0:13,0:15:38.57:0,39,478	0/0:20,0:22:50.14:0,50,647	0/0:14,0:16:44.10:0,44,546	0/0:11,0:11:27.05:0,27,357	1/1:7,20:27:55.98:519,56,0	1/1:4,16:20:44.99:416,45,0	1/1:3,10:13:30.01:278,30,0
chr10	86082061	.	GGTGTGTGTGTGTGTGTGT	G	1561.56	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=2.539;DP=427;FS=10.155;HRun=0;HaplotypeScore=183.5436;InbreedingCoeff=0.7900;MQ=59.81;MQ0=19;MQRankSum=-2.428;QD=14.20;ReadPosRankSum=-0.674;VQSLOD=1.9969;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:57.53:0,58,2782	./.	0/0:28,0:9:5.92:0,6,39	0/0:43,0:20:8.99:0,9,75	0/0:15,0:15:24.08:0,24,1676	0/0:11,0:13:15.05:0,15,1127	0/0:17,0:17:18:0,18,367	1/1:12,0:12:4.60:186,5,0	0/0:10,0:10:12.04:0,12,567	0/0:7,0:12:15.23:0,15,208	0/0:2,0:4:2.98:0,3,22	0/0:13,0:13:21:0,21,1062	0/0:12,0:12:18.06:0,18,971	0/0:14,0:14:15.03:0,15,775	0/0:12,0:12:18.03:0,18,724	0/0:8,0:7:15.05:0,15,903	0/0:13,0:12:9:0,9,125	0/0:10,0:9:8.48:0,8,168	1/1:11,5:15:14.92:301,15,0	1/1:3,6:10:12:437,12,0	1/1:43,0:42:16.22:143,16,0	0/0:6,0:6:9.03:0,9,736	0/0:10,0:10:18.04:0,18,966	0/0:29,0:30:48.11:0,48,2692	0/0:7,0:6:6.02:0,6,243	1/1:9,2:10:6.48:52,6,0	1/1:9,8:17:15.05:608,15,0	./.
chr10	86082850	.	ATG	A	819.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.912;DP=1024;FS=8.708;HRun=0;HaplotypeScore=135.9700;InbreedingCoeff=0.9801;MQ=55.89;MQ0=14;MQRankSum=-0.410;QD=28.26;ReadPosRankSum=0.874;VQSLOD=5.2224;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:94.54:0,95,1575	0/0:6,0:6:15.05:0,15,248	0/0:59,0:36:86.45:0,86,1359	0/0:52,0:23:53.44:0,53,854	0/0:26,0:26:69.21:0,69,1135	0/0:24,0:24:66.19:0,66,1068	0/0:31,0:31:59.45:0,59,1028	0/0:52,0:49:99:0,126,2067	0/0:43,0:43:99:0,117,2013	0/0:43,0:43:99:0,99,1673	0/0:21,0:21:54.15:0,54,901	0/0:47,0:47:99:0,105,1719	0/0:47,0:47:99:0,135,2307	0/0:41,0:41:99:0,117,1941	0/0:47,0:47:99:0,135,2291	0/0:52,0:52:99:0,141,2327	0/0:35,0:35:90.31:0,90,1527	1/1:4,25:28:69.23:915,69,0	0/0:14,0:13:30.10:0,30,514	0/0:24,0:24:59.74:0,60,1038	0/0:89,0:88:99:0,207,3496	0/0:9,0:9:21.06:0,21,328	0/0:26,0:26:63.22:0,63,1067	0/0:30,0:29:71.26:0,71,1160	0/0:26,0:26:66.22:0,66,1117	0/0:44,0:44:99:0,120,2018	0/0:32,0:32:84.29:0,84,1425	0/0:31,0:31:72.24:0,72,1246
chr10	86083142	.	AT	A	729.94	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.592;DP=650;FS=3.232;HRun=9;HaplotypeScore=60.3885;InbreedingCoeff=0.9571;MQ=71.24;MQ0=0;MQRankSum=-1.439;QD=18.25;ReadPosRankSum=1.529;VQSLOD=3.9473;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:29:66.03:604,66,0	0/0:9,0:9:27.08:0,27,312	0/0:19,0:16:41.78:0,42,439	0/0:10,0:9:7.25:0,7,123	0/0:28,0:29:75.05:0,75,845	0/0:33,0:33:96.18:0,96,1089	1/1:1,10:11:27.01:247,27,0	0/0:35,0:35:87.24:0,87,984	0/0:17,0:17:51.13:0,51,577	0/0:39,0:39:96.22:0,96,1070	0/0:20,0:20:57.17:0,57,658	0/0:20,0:20:51.14:0,51,579	0/0:20,0:21:60:0,60,662	0/0:18,0:18:36.08:0,36,395	0/0:25,0:25:63.18:0,63,718	0/0:26,0:26:78.21:0,78,881	0/0:28,0:28:84.25:0,84,969	0/0:20,0:20:48.14:0,48,554	0/0:20,0:20:45.13:0,45,514	0/0:28,0:28:78.22:0,78,888	0/0:14,0:14:36.11:0,36,415	0/0:29,0:29:78.22:0,78,892	0/0:35,0:36:99:0,99,1119	0/0:17,0:18:44.97:0,45,499	0/0:29,0:29:75.21:0,75,857	0/0:21,1:22:26.67:0,27,545	0/0:26,0:26:60.14:0,60,661	0/0:19,0:19:49.01:0,49,545
chr10	86084432	.	C	CT	1049.44	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=-3.187;DP=590;FS=2.634;HRun=12;HaplotypeScore=82.7204;InbreedingCoeff=0.7409;MQ=59.79;MQ0=8;MQRankSum=1.770;QD=8.46;ReadPosRankSum=0.400;VQSLOD=2.9046;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:28:39.13:0,39,111	1/1:2,7:10:17.86:160,18,0	0/1:37,0:11:20.04:20,0,36	0/0:54,0:15:18.83:0,19,114	0/0:19,2:21:12.15:0,12,248	0/0:16,0:17:43.77:0,44,312	0/0:4,0:13:21.31:0,21,75	0/0:24,0:24:31.60:0,32,224	0/0:16,0:16:15.26:0,15,265	1/1:6,21:27:54.97:540,55,0	1/1:4,2:6:12.02:117,12,0	0/0:17,0:18:37.76:0,38,268	0/1:10,0:11:0.48:0,0,114	0/0:12,0:12:20.80:0,21,152	0/0:17,1:18:3.54:0,4,189	0/0:10,0:10:16.86:0,17,113	1/1:7,24:32:23.66:372,24,0	0/0:11,0:31:36.60:0,37,106	0/0:30,0:29:40.08:0,40,420	0/0:22,0:23:37.51:0,38,258	0/0:21,0:21:44.70:0,45,328	0/0:13,0:14:28.87:0,29,202	0/0:20,0:22:27.14:0,27,315	0/0:16,0:17:35.20:0,35,231	0/0:20,0:20:50.69:0,51,372	0/0:26,1:28:23.46:0,23,325	0/0:18,0:18:35.74:0,36,262	0/0:5,0:5:10.98:0,11,72
chr10	86084466	.	C	CTT	649.35	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.879;DP=640;FS=23.580;HRun=10;HaplotypeScore=81.1226;InbreedingCoeff=0.9126;MQ=50.26;MQ0=39;MQRankSum=-2.745;QD=13.82;ReadPosRankSum=0.153;VQSLOD=0.3114;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,11:27:23.75:510,24,0	0/0:7,0:7:11.82:0,12,114	0/0:69,0:9:20.97:0,21,194	0/0:85,0:13:14.22:0,14,98	0/0:26,0:24:65.66:0,66,630	0/0:19,0:19:23.15:0,23,374	1/1:8,8:17:23.65:260,24,0	0/0:24,0:22:32.24:0,32,514	0/0:14,0:13:32.63:0,33,308	0/0:21,0:21:45.03:0,45,455	0/0:7,0:7:21.05:0,21,213	0/0:18,0:19:38.57:0,39,348	0/0:20,0:19:44.96:0,45,457	0/0:10,0:10:23.96:0,24,229	0/0:16,0:16:45.06:0,45,455	0/0:11,0:11:20.91:0,21,201	0/0:27,0:27:54.02:0,54,526	0/0:29,0:29:69.12:0,69,691	0/0:25,0:23:23.49:0,23,348	0/0:22,0:21:47.27:0,47,517	0/0:10,0:10:27.05:0,27,273	0/0:16,0:16:41.83:0,42,385	0/0:21,0:21:57.10:0,57,570	0/0:21,0:19:44.80:0,45,403	0/0:22,0:23:45.01:0,45,437	0/0:22,0:24:56.51:0,57,598	0/0:14,0:14:26.98:0,27,258	0/0:6,0:4:6.01:0,6,61
chr10	86085295	.	GTA	G	6265.61	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.016;DP=701;FS=19.484;HRun=0;HaplotypeScore=83.4108;InbreedingCoeff=0.9993;MQ=72.05;MQ0=0;MQRankSum=-0.472;QD=36.22;ReadPosRankSum=2.888;VQSLOD=5.4386;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,38:42:96.32:1375,96,0	1/1:1,12:13:36.12:516,36,0	0/0:20,0:20:51.17:0,51,899	0/0:17,0:17:39.13:0,39,699	0/0:33,0:33:93.30:0,93,1635	0/0:18,0:18:51.17:0,51,928	1/1:4,29:33:78.26:1118,78,0	0/0:40,0:40:99:0,117,2079	0/0:12,0:12:36.12:0,36,660	1/1:3,29:32:90.30:1280,90,0	1/1:1,18:19:47.98:687,48,0	0/0:23,0:23:66.23:0,66,1203	0/0:27,0:27:78.27:0,78,1420	0/0:17,0:17:48.16:0,48,860	0/0:24,0:24:72.25:0,72,1320	0/0:22,0:22:60.21:0,60,1100	1/1:2,32:34:90.30:1289,90,0	0/0:28,0:28:84.29:0,84,1530	0/0:26,0:26:78.27:0,78,1395	0/0:20,0:20:60.21:0,60,1085	0/0:22,0:22:54.19:0,54,983	0/0:22,0:22:63.22:0,63,1147	0/0:23,0:23:63.22:0,63,1146	0/0:30,0:30:84.23:0,84,1410	0/0:21,0:21:60.21:0,60,1082	0/0:36,2:38:22.45:0,22,1767	0/0:26,0:26:78.27:0,78,1419	0/0:19,0:19:57.20:0,57,1030
chr10	86086282	.	CTTTT	C	1657.68	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.922;DP=516;FS=5.201;HRun=16;HaplotypeScore=92.7491;InbreedingCoeff=0.9098;MQ=65.85;MQ0=25;MQRankSum=-5.061;QD=14.29;ReadPosRankSum=5.343;VQSLOD=0.7055;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:27:30.55:237,31,0	1/1:2,3:5:6.85:133,7,0	0/0:67,0:22:36.28:0,36,467	0/0:63,0:18:33.52:0,34,432	0/0:19,0:21:48.14:0,48,952	0/0:12,0:18:8.90:0,9,789	1/1:1,1:8:11.94:109,12,0	0/0:34,0:37:83.48:0,83,1533	0/0:8,0:9:21.07:0,21,465	1/1:10,9:19:29.78:362,30,0	1/1:7,15:23:35.68:456,36,0	0/0:6,0:6:12.04:0,12,240	0/0:8,0:8:20.99:0,21,389	0/0:8,0:8:18.06:0,18,368	0/0:19,0:18:54.18:0,54,1093	0/0:7,0:9:24.08:0,24,445	1/1:2,15:17:33.04:434,33,0	1/1:9,0:14:15.26:117,15,0	0/0:16,0:16:36.12:0,36,772	0/0:16,0:16:33.78:0,34,642	0/0:7,0:15:24.04:0,24,346	0/0:3,0:3:6.02:0,6,75	0/0:10,0:12:24.08:0,24,499	0/0:8,0:8:15.05:0,15,330	0/0:5,0:6:18.06:0,18,391	0/0:16,0:17:5.04:0,5,540	0/0:19,0:19:42.13:0,42,853	0/0:15,0:13:27.09:0,27,513
chr10	86086878	.	G	GT	9943.44	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-5.734;DP=502;FS=3.443;HRun=3;HaplotypeScore=59.9133;InbreedingCoeff=0.9965;MQ=71.29;MQ0=0;MQRankSum=-4.659;QD=36.69;ReadPosRankSum=0.239;VQSLOD=5.3592;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:75.21:1025,75,0	1/1:1,10:11:30.03:396,30,0	0/0:12,0:12:22.55:0,23,262	0/0:7,0:7:15.05:0,15,180	0/0:17,0:16:48.09:0,48,546	0/0:13,0:13:39.06:0,39,441	0/0:16,0:16:45.14:0,45,539	1/1:3,34:37:99:1390,102,0	0/0:14,0:14:42.11:0,42,491	1/1:1,32:33:90.27:1224,90,0	1/1:0,15:15:39:498,39,0	0/0:12,0:12:36.11:0,36,431	0/0:23,0:23:69.20:0,69,814	0/0:10,0:10:27.08:0,27,324	0/0:21,0:21:60.14:0,60,684	0/0:17,0:17:42.13:0,42,503	1/1:1,20:21:60.20:839,60,0	1/1:0,7:7:21.07:294,21,0	1/1:2,12:14:33.10:447,33,0	1/1:1,25:26:72.12:960,72,0	1/1:1,16:17:42.14:587,42,0	0/0:14,0:14:42.12:0,42,491	0/0:19,0:19:48.14:0,48,575	0/0:13,0:13:39.12:0,39,467	0/0:23,0:23:63.17:0,63,733	1/1:2,27:29:84.19:1131,84,0	1/1:3,16:19:48.13:652,48,0	1/1:0,14:14:36.12:503,36,0
chr10	86086983	.	C	CG	45.55	PASS	AB=0.556;AC=1;AF=0.019;AN=52;BaseQRankSum=4.027;DP=412;FS=1.833;HRun=0;HaplotypeScore=90.2849;InbreedingCoeff=0.1598;MQ=49.23;MQ0=22;MQRankSum=-3.487;QD=9.11;ReadPosRankSum=-2.353;VQSLOD=3.1629;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:1,4:5:8.54:120,0,9	0/0:3,0:3:8.96:0,9,99	./.	./.	0/0:31,0:31:90.23:0,90,1200	0/0:21,0:21:63.21:0,63,880	0/0:14,0:10:27.09:0,27,377	0/0:16,0:6:14.94:0,15,177	0/0:28,0:28:75.24:0,75,1029	0/0:22,0:22:63.10:0,63,756	0/0:10,0:10:23.89:0,24,226	0/0:9,0:9:27.09:0,27,377	0/0:13,0:13:35.97:0,36,503	0/0:16,0:16:42.12:0,42,556	0/0:19,0:19:54.15:0,54,708	0/0:25,0:24:61.95:0,62,846	0/0:19,0:15:45.06:0,45,555	0/0:10,0:8:19.61:0,20,234	0/0:12,0:9:26.95:0,27,279	0/0:22,0:18:50.78:0,51,567	0/0:10,0:8:24.01:0,24,286	0/0:19,0:17:48.16:0,48,670	0/0:19,0:18:45.13:0,45,601	0/0:13,0:12:36.09:0,36,468	0/0:17,0:17:39.13:0,39,545	0/0:16,0:15:39.79:0,40,508	0/0:13,0:10:29.93:0,30,347	0/0:10,0:7:12.04:0,12,143
chr10	86086992	.	C	CAGT	71.83	PASS	AB=0.636;AC=1;AF=0.019;AN=52;BaseQRankSum=3.764;DP=429;FS=4.256;HRun=0;HaplotypeScore=96.6599;InbreedingCoeff=-0.0267;MQ=49.86;MQ0=22;MQRankSum=-1.177;QD=10.26;ReadPosRankSum=-1.465;VQSLOD=2.8621;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:3,4:7:55.89:146,0,56	0/0:5,0:5:11.87:0,12,174	./.	./.	0/0:31,0:31:87.23:0,87,1205	0/0:22,0:22:66.23:0,66,1229	0/0:14,0:10:24.08:0,24,443	0/0:16,0:8:14.66:0,15,269	0/0:28,0:28:72.21:0,72,1179	0/0:23,0:23:66.19:0,66,1163	0/0:6,0:6:12.04:0,12,221	0/0:9,0:9:27.09:0,27,503	0/0:14,0:14:32.96:0,33,615	0/0:16,0:16:42.14:0,42,780	0/0:21,0:21:60.18:0,60,1045	0/0:24,0:23:59.87:0,60,1094	0/0:21,0:17:48.16:0,48,892	0/0:10,0:8:24.07:0,24,323	0/0:8,0:5:15.03:0,15,160	0/0:17,0:13:36.08:0,36,408	0/0:11,0:9:21.54:0,22,326	0/0:20,0:18:48.15:0,48,841	0/0:22,0:21:57.16:0,57,993	0/0:16,0:15:39.12:0,39,697	0/0:17,0:17:39.13:0,39,717	0/0:13,0:12:8.74:0,9,354	0/0:13,0:10:26.20:0,26,339	0/0:11,0:8:15.05:0,15,235
chr10	86087566	.	TAC	T	1152.14	PASS	AB=0.978;AC=17;AF=0.315;AN=54;BaseQRankSum=4.860;DP=299;FS=18.918;HRun=0;HaplotypeScore=56.6832;InbreedingCoeff=0.5780;MQ=63.11;MQ0=1;MQRankSum=-4.706;QD=11.41;ReadPosRankSum=-4.330;VQSLOD=1.0103;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:26.97:0,27,271	0/1:3,0:3:11.70:41,0,12	0/0:6,0:5:14.47:0,14,134	0/1:3,0:3:2.28:2,0,32	0/0:26,0:26:78.22:0,78,1367	0/0:24,0:24:69.21:0,69,1242	0/0:7,0:7:21.04:0,21,338	1/1:29,0:29:70.37:556,70,0	0/0:6,0:6:18.06:0,18,337	0/1:4,0:4:7.71:46,0,8	0/1:6,0:6:13.68:14,0,39	0/0:8,0:8:24.05:0,24,395	0/0:13,0:13:36.12:0,36,684	0/0:11,0:11:33.10:0,33,603	0/0:16,1:16:46.11:0,46,766	0/0:15,0:15:45.10:0,45,746	0/1:14,2:16:94.94:95,0,121	0/0:18,0:18:45.05:0,45,465	1/1:10,0:10:18.26:122,18,0	1/1:3,0:3:8.95:67,9,0	./.	0/0:2,0:2:6.01:0,6,72	0/0:6,0:6:17.07:0,17,262	0/0:7,0:7:21:0,21,288	0/0:14,0:14:42.12:0,42,743	1/1:10,0:10:26.60:180,27,0	1/1:9,0:9:14.94:116,15,0	1/1:7,1:8:11.76:98,12,0
chr10	86087578	.	TACAC	T	2096.76	PASS	AB=1.000;AC=17;AF=0.315;AN=54;BaseQRankSum=10.100;DP=303;FS=1.779;HRun=0;HaplotypeScore=66.0364;InbreedingCoeff=0.6739;MQ=59.91;MQ0=1;MQRankSum=-8.458;QD=19.97;ReadPosRankSum=-0.548;VQSLOD=3.2177;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,11:13:15.05:276,15,0	0/1:2,0:2:40.92:43,0,41	0/0:5,0:3:4.37:0,4,93	0/1:7,0:5:1.27:1,0,91	0/0:27,0:26:78.25:0,78,1787	0/0:24,0:24:72.23:0,72,1684	0/0:8,0:8:24.08:0,24,573	1/1:25,0:25:13.95:387,14,0	0/0:6,0:6:15.05:0,15,396	0/0:3,0:3:0.87:0,1,53	0/0:6,0:6:9.95:0,10,153	0/0:10,0:10:30.10:0,30,702	0/0:12,0:12:36.12:0,36,919	0/0:11,0:11:33.11:0,33,829	0/0:18,0:18:51.17:0,51,1226	0/0:15,0:15:42.13:0,42,865	0/0:14,0:14:20.47:0,20,402	1/1:1,16:17:36.12:662,36,0	0/1:11,0:11:5.70:310,0,6	1/1:4,0:4:6.02:84,6,0	./.	0/0:3,0:3:9.03:0,9,228	0/0:6,0:6:18.06:0,18,444	0/0:5,0:5:12.04:0,12,242	0/0:17,0:17:51.17:0,51,1231	1/1:11,0:11:23.05:249,23,0	1/1:6,0:6:9.03:118,9,0	1/1:9,0:9:12.04:151,12,0
chr10	86087582	.	CACACAT	C	1744.40	PASS	AB=1.000;AC=17;AF=0.315;AN=54;BaseQRankSum=10.193;DP=308;FS=4.076;HRun=0;HaplotypeScore=79.7365;InbreedingCoeff=0.7785;MQ=60.34;MQ0=1;MQRankSum=-5.821;QD=16.94;ReadPosRankSum=-0.455;VQSLOD=2.6513;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:10.19:28,10,0	0/0:2,0:2:3.48:0,3,75	0/0:5,0:3:3.97:0,4,133	0/1:7,0:5:1.27:1,0,133	0/0:28,0:27:81.26:0,81,2548	0/0:25,0:25:75.24:0,75,2399	0/0:9,0:9:27.09:0,27,878	1/1:15,10:25:22.87:662,23,0	0/0:5,0:5:15.05:0,15,549	0/0:5,0:5:14.93:0,15,177	0/0:6,0:6:15.04:0,15,287	0/0:10,0:10:30.10:0,30,1056	0/0:13,0:13:39.13:0,39,1375	0/0:11,0:11:33.11:0,33,1156	0/0:18,0:18:51.17:0,51,1702	0/0:16,0:16:45.14:0,45,1172	0/0:13,0:13:35.95:0,36,671	1/1:17,0:17:21.80:61,22,0	1/1:10,4:14:0.28:453,0,0	1/1:2,4:6:6.01:58,6,0	./.	0/0:3,0:3:9.03:0,9,326	0/0:6,0:6:18.06:0,18,643	0/0:4,0:4:12.04:0,12,285	0/0:19,0:19:57.20:0,57,1890	1/1:6,5:11:7.45:308,7,0	1/1:3,3:6:9.02:129,9,0	1/1:3,3:6:15:225,15,0
chr10	86087584	.	CACAT	C	2692.09	PASS	AB=1.000;AC=19;AF=0.352;AN=54;BaseQRankSum=9.875;DP=304;FS=5.767;HRun=0;HaplotypeScore=63.9962;InbreedingCoeff=0.7530;MQ=60.53;MQ0=1;MQRankSum=-6.330;QD=25.40;ReadPosRankSum=-1.719;VQSLOD=2.4514;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:15.04:163,15,0	0/1:2,0:2:17.76:18,0,45	0/1:4,0:2:4.86:5,0,57	0/1:7,0:5:1.35:1,0,89	0/0:28,0:27:78.19:0,78,1839	0/0:25,0:25:72.19:0,72,1756	0/0:9,0:9:27.08:0,27,643	1/1:19,5:24:68.97:865,69,0	0/0:6,0:6:18.05:0,18,444	0/0:5,0:5:11.97:0,12,135	0/0:5,0:6:15:0,15,184	0/0:11,0:11:33.10:0,33,825	0/0:14,0:14:42.13:0,42,1063	0/0:11,0:11:33.11:0,33,869	0/0:17,0:17:51.14:0,51,1258	0/0:14,0:14:42.06:0,42,793	0/0:14,0:14:32.34:0,32,461	1/1:16,0:16:36.08:379,36,0	1/1:5,8:13:33.08:543,33,0	1/1:4,2:6:6.02:119,6,0	./.	0/0:3,0:3:9.03:0,9,250	0/0:6,0:6:18.06:0,18,488	0/0:4,0:4:12.01:0,12,175	0/0:20,0:20:60.18:0,60,1410	1/1:7,4:11:29.93:409,30,0	1/1:4,2:6:9.03:169,9,0	1/1:3,3:6:15.01:216,15,0
chr10	86088227	.	AG	A	7105.29	PASS	AB=0.922;AC=29;AF=0.518;AN=56;BaseQRankSum=14.234;DP=680;FS=27.201;HRun=10;HaplotypeScore=97.0052;InbreedingCoeff=0.7973;MQ=70.27;MQ0=0;MQRankSum=0.028;QD=17.50;ReadPosRankSum=3.401;VQSLOD=3.7986;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,30:46:85.59:886,86,0	1/1:3,11:14:32.87:270,33,0	0/0:25,0:23:34.38:0,34,404	0/1:13,0:13:59.72:60,0,105	0/0:16,1:17:10.10:0,10,320	0/0:27,0:27:40.19:0,40,605	0/0:28,1:30:21.61:0,22,575	1/1:10,23:32:58.79:487,59,0	0/0:20,0:20:48.05:0,48,502	1/1:6,32:38:98.85:854,99,0	1/1:3,15:18:32.73:285,33,0	0/1:14,3:17:67.62:68,0,229	0/1:10,1:11:1.96:2,0,200	0/0:19,0:19:29.33:0,29,411	0/0:28,0:28:54.12:0,54,753	0/0:23,1:24:34.10:0,34,589	1/1:2,29:31:65.99:572,66,0	1/1:2,0:18:26.48:78,26,0	1/1:3,17:20:50.90:428,51,0	1/1:8,17:25:56.89:493,57,0	1/1:3,40:43:99:988,114,0	0/0:27,1:28:32.64:0,33,519	0/0:17,0:17:9.49:0,9,258	0/0:22,1:23:19.07:0,19,429	0/0:16,0:16:21.58:0,22,382	1/1:3,22:25:68.88:593,69,0	1/1:3,35:38:92.94:806,93,0	1/1:3,13:16:26.96:234,27,0
chr10	86089071	.	T	TTACG	2060.39	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.593;DP=763;FS=4.638;HRun=0;HaplotypeScore=147.8382;InbreedingCoeff=0.9998;MQ=75.02;MQ0=0;MQRankSum=-0.714;QD=64.39;ReadPosRankSum=1.609;VQSLOD=5.8034;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,144,2610	0/0:16,0:16:42.14:0,42,784	0/0:13,0:13:36.08:0,36,634	0/0:25,0:24:46.32:0,46,932	0/0:20,0:20:53.65:0,54,899	0/0:30,0:30:84.29:0,84,1559	0/0:32,0:32:93.29:0,93,1644	0/0:29,0:29:84.28:0,84,1539	0/0:26,0:26:69.22:0,69,1249	0/0:30,0:30:84.29:0,84,1562	0/0:16,0:16:48.16:0,48,882	0/0:36,0:36:99:0,99,1746	0/0:26,0:26:78.27:0,78,1451	0/0:29,0:29:75.24:0,75,1333	0/0:22,0:22:63.22:0,63,1175	0/0:27,0:27:75.26:0,75,1400	0/0:27,0:27:81.28:0,81,1503	1/1:2,30:32:81.28:2155,81,0	0/0:26,0:26:72.20:0,72,1247	0/0:25,0:25:66.23:0,66,1224	0/0:40,0:40:99:0,105,1844	0/0:21,0:21:60.20:0,60,1082	0/0:19,0:19:48.12:0,48,785	0/0:34,0:34:96.30:0,96,1720	0/0:18,0:18:54.19:0,54,1007	0/0:29,0:29:75.24:0,75,1323	0/0:42,0:41:99:0,117,2073	0/0:21,0:21:63.22:0,63,1176
chr10	86092552	.	TTTATTATTATTATTATTATTA	T	2482.62	PASS	AB=0.795;AC=14;AF=0.318;AN=44;BaseQRankSum=5.356;DP=199;FS=0.957;HRun=0;HaplotypeScore=113.6469;InbreedingCoeff=0.3775;MQ=61.47;MQ0=4;MQRankSum=-2.053;QD=21.04;ReadPosRankSum=-2.393;VQSLOD=1.8999;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:23.34:0,23,175	0/0:2,0:3:5.93:0,6,40	./.	./.	0/0:5,0:5:3:0,3,25	0/0:6,0:6:15.05:0,15,1060	0/0:2,0:2:3.01:0,3,50	0/1:19,10:28:99:314,0,113	0/0:3,0:3:6.02:0,6,460	1/1:6,0:7:3.01:87,3,0	./.	0/0:3,0:3:3.01:0,3,76	0/0:3,0:3:3.01:0,3,38	0/0:3,0:5:5.98:0,6,57	0/0:1,0:1:3.01:0,3,95	./.	0/1:18,0:22:84.66:155,0,85	1/1:13,6:18:3.01:165,3,0	1/1:11,3:13:12.03:526,12,0	./.	./.	0/0:4,0:3:0.47:0,0,1	0/0:3,0:3:3.01:0,3,275	0/0:3,0:4:6.02:0,6,344	0/0:5,0:5:9.03:0,9,802	1/1:9,4:13:15.05:788,15,0	1/1:9,2:11:6.02:256,6,0	1/1:1,2:2:6.02:332,6,0
chr10	86092572	.	TA	T	430.90	PASS	AB=0.932;AC=10;AF=0.208;AN=48;BaseQRankSum=8.345;DP=153;FS=4.645;HRun=1;HaplotypeScore=64.7815;InbreedingCoeff=-0.1478;MQ=43.43;MQ0=6;MQRankSum=-4.519;QD=4.14;ReadPosRankSum=1.005;VQSLOD=0.5115;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:29.83:0,30,444	0/0:3,0:3:9.02:0,9,110	0/0:1,0:1:3.01:0,3,41	./.	0/0:2,0:2:6.02:0,6,85	0/0:5,0:5:15.05:0,15,206	0/0:1,0:1:3.01:0,3,43	0/1:21,0:20:99:190,0,479	0/0:3,0:3:9.03:0,9,113	0/1:5,0:5:0.02:0,0,89	0/1:2,0:2:2.14:2,0,30	0/0:1,1:2:6.02:0,6,72	0/0:3,0:3:9.03:0,9,115	0/0:3,0:3:6.02:0,6,74	0/0:1,0:1:3.01:0,3,43	./.	0/1:20,0:20:1.64:2,0,376	0/1:15,3:17:99:123,0,283	0/1:11,1:11:32.87:33,0,210	0/0:1,0:1:3.01:0,3,43	./.	./.	0/0:1,0:1:3.01:0,3,30	0/0:4,0:4:10.85:0,11,133	0/0:3,0:3:9.03:0,9,139	0/1:10,4:13:99:151,0,162	0/1:8,1:9:35.04:35,0,187	1/1:3,0:2:3.63:11,4,0
chr10	86092600	.	AGT	A	525.27	PASS	AB=0.854;AC=27;AF=0.587;AN=46;BaseQRankSum=5.891;DP=188;FS=30.554;HRun=0;HaplotypeScore=82.3038;InbreedingCoeff=0.1862;MQ=38.75;MQ0=14;MQRankSum=-5.326;QD=3.86;ReadPosRankSum=3.355;VQSLOD=-0.1434;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:7:2.60:10,3,0	./.	./.	./.	0/1:6,0:5:0.13:0,0,0	0/0:3,0:3:6.01:0,6,71	0/0:2,0:2:6:0,6,52	./.	0/0:8,0:6:17.89:0,18,239	1/1:6,0:6:8.52:42,9,0	1/1:3,0:3:5.68:28,6,0	0/0:6,0:6:6.32:0,6,60	0/1:6,0:8:43.08:43,0,97	0/1:7,1:8:27.12:27,0,39	0/0:2,0:2:3.01:0,3,45	0/0:3,0:2:3.01:0,3,45	1/1:18,0:18:19.89:98,20,0	1/1:11,0:11:14.04:67,14,0	1/1:8,0:8:5.68:28,6,0	1/1:7,0:5:2.84:14,3,0	./.	0/1:2,2:3:27.12:27,0,39	0/1:3,2:5:35.79:54,0,36	0/1:9,1:8:25.04:25,0,150	0/1:6,0:6:18.13:18,0,141	1/1:14,0:12:22.73:111,23,0	1/1:8,0:8:11.36:56,11,0	1/1:2,0:2:5.68:28,6,0
chr10	86092622	.	TGTGTGTGTGTGTGTGTGCGCGC	T	6495.24	PASS	AB=1.000;AC=23;AF=0.426;AN=54;BaseQRankSum=7.366;DP=242;FS=50.611;HRun=0;HaplotypeScore=121.0052;InbreedingCoeff=0.6742;MQ=47.80;MQ0=14;MQRankSum=-6.650;QD=48.84;ReadPosRankSum=1.769;VQSLOD=1.9511;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:17:6.02:162,6,0	0/0:2,0:2:2.04:0,2,6	1/1:2,0:1:2.94:18,3,0	0/0:5,0:1:2.94:0,3,18	0/0:7,0:6:2.07:0,2,280	0/0:4,0:3:9.03:0,9,906	0/0:8,0:8:24.08:0,24,1602	1/1:14,0:11:15.01:306,15,0	0/0:8,0:6:18.06:0,18,1824	1/1:1,4:5:9.02:556,9,0	1/1:0,6:6:6.02:370,6,0	0/0:7,0:7:15.05:0,15,876	0/0:10,0:10:27.09:0,27,2043	0/0:9,0:9:12.04:0,12,760	0/0:4,0:4:12.04:0,12,697	0/0:3,0:2:3.01:0,3,317	1/1:4,18:22:21.07:1296,21,0	0/1:12,0:11:40.49:40,0,141	1/1:9,2:11:14.06:676,14,0	1/1:5,5:8:3.01:185,3,0	./.	0/0:4,0:3:6.02:0,6,561	0/0:6,0:6:15.05:0,15,935	0/0:19,0:17:36.12:0,36,3111	0/0:8,0:8:21.07:0,21,1600	1/1:4,12:15:39.08:1738,39,0	1/1:2,9:11:11.55:741,12,0	1/1:1,2:3:9.03:408,9,0
chr10	86092628	.	TGTGTGTGTGTGCGC	T	4544.44	PASS	AB=0.688;AC=23;AF=0.442;AN=52;BaseQRankSum=8.431;DP=232;FS=57.658;HRun=0;HaplotypeScore=94.8056;InbreedingCoeff=0.7338;MQ=49.53;MQ0=12;MQRankSum=-6.914;QD=38.84;ReadPosRankSum=1.150;VQSLOD=2.0149;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:16:6.02:144,6,0	./.	1/1:2,0:1:2.74:12,3,0	0/0:6,0:1:2.84:0,3,14	0/0:7,0:6:2.66:0,3,178	0/0:4,0:3:9.03:0,9,594	0/0:10,0:10:30.10:0,30,979	1/1:9,0:7:18.06:242,18,0	0/0:8,0:6:18.06:0,18,1211	1/1:4,0:4:9.03:294,9,0	1/1:6,0:6:6.02:197,6,0	0/0:7,0:7:14.41:0,14,506	0/0:10,0:10:27.05:0,27,1206	0/0:9,0:9:9.03:0,9,438	0/0:4,0:4:12.04:0,12,383	0/0:4,0:3:6.02:0,6,263	1/1:18,0:18:21.07:687,21,0	0/1:6,5:10:3.08:666,0,3	1/1:7,0:7:21.07:403,21,0	1/1:10,0:8:3.01:98,3,0	./.	0/0:4,0:3:6.02:0,6,360	0/0:6,0:6:12.04:0,12,528	0/0:21,0:19:42.04:0,42,2043	0/0:8,0:8:21.07:0,21,1003	1/1:14,0:13:36.12:955,36,0	1/1:10,0:10:11.83:392,12,0	1/1:8,0:8:24.08:455,24,0
chr10	86092638	.	TGCGCGC	T	3540.13	PASS	AC=24;AF=0.462;AN=52;BaseQRankSum=7.328;DP=239;FS=76.697;HRun=0;HaplotypeScore=78.4306;InbreedingCoeff=0.7850;MQ=53.94;MQ0=6;MQRankSum=-5.831;QD=30.00;ReadPosRankSum=-0.722;VQSLOD=0.5591;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:16:3.01:30,3,0	./.	1/1:2,0:1:2.94:18,3,0	0/0:7,0:3:0.46:0,0,1	0/0:8,0:7:2.60:0,3,97	0/0:4,0:3:9.03:0,9,280	0/0:11,0:11:33.11:0,33,856	1/1:3,11:12:33.06:619,33,0	0/0:8,0:7:18.02:0,18,530	1/1:4,0:4:9.03:157,9,0	1/1:6,0:6:6.02:104,6,0	0/0:9,0:9:18.06:0,18,455	0/0:9,0:9:24.04:0,24,577	0/0:10,0:10:15.05:0,15,399	0/0:4,0:4:12.04:0,12,310	0/0:3,0:2:6.02:0,6,181	1/1:18,0:18:21.07:366,21,0	1/1:8,0:8:21.02:213,21,0	1/1:2,6:8:21.07:427,21,0	1/1:8,1:8:3.01:52,3,0	./.	0/0:4,0:4:6.02:0,6,175	0/0:5,0:5:12.04:0,12,296	0/0:24,0:23:54.18:0,54,1486	0/0:8,0:8:18.06:0,18,519	1/1:13,0:13:39.09:712,39,0	1/1:9,0:9:12.04:210,12,0	1/1:10,0:10:30.10:631,30,0
chr10	86092923	.	T	TTCTAATAGAT	3582.99	PASS	AB=0.636;AC=43;AF=0.977;AN=44;BaseQRankSum=-1.659;DP=62;FS=0.000;HRun=0;HaplotypeScore=19.9334;InbreedingCoeff=-0.1347;MQ=106.87;MQ0=0;MQRankSum=-1.143;QD=61.78;ReadPosRankSum=-0.332;VQSLOD=2.7962;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:3.01:128,3,0	1/1:2,0:2:6.01:173,6,0	1/1:2,1:4:9.03:338,9,0	0/1:3,0:7:0.35:378,0,0	1/1:1,0:1:3:27,3,0	1/1:1,0:1:3.01:58,3,0	./.	1/1:2,0:2:3.01:92,3,0	1/1:5,0:5:11.99:245,12,0	1/1:2,0:2:6.02:275,6,0	1/1:3,0:3:9.02:177,9,0	./.	1/1:2,0:2:3:26,3,0	1/1:1,0:1:3.01:146,3,0	1/1:1,0:1:2.97:20,3,0	1/1:2,0:2:6.02:254,6,0	./.	1/1:1,0:1:2.97:20,3,0	./.	1/1:1,0:1:3.01:89,3,0	./.	1/1:3,0:3:9.02:158,9,0	./.	1/1:3,0:3:2.97:20,3,0	1/1:1,0:1:3.01:112,3,0	1/1:2,0:2:6.01:95,6,0	1/1:4,0:4:12:307,12,0	1/1:6,0:6:12.02:444,12,0
chr10	86094117	.	T	TACAC	2400.56	PASS	AB=0.963;AC=24;AF=0.462;AN=52;BaseQRankSum=0.614;DP=610;FS=16.317;HRun=0;HaplotypeScore=118.5372;InbreedingCoeff=0.7061;MQ=61.62;MQ0=18;MQRankSum=-2.319;QD=8.70;ReadPosRankSum=-1.562;VQSLOD=1.6010;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:41:23.14:23,0,44	1/1:5,0:5:3.01:43,3,0	./.	./.	0/0:10,0:14:18.02:0,18,210	0/0:14,0:14:12.02:0,12,163	0/0:11,0:12:14.83:0,15,181	1/1:26,0:26:16.79:204,17,0	0/0:22,0:28:23.53:0,24,433	1/1:29,0:28:43.21:527,43,0	1/1:6,0:9:3.01:52,3,0	0/0:26,0:26:28.62:0,29,381	0/0:15,0:19:15.02:0,15,190	0/0:18,0:19:15.02:0,15,191	0/0:17,0:17:21.03:0,21,263	0/0:26,0:26:57.13:0,57,796	1/1:27,0:25:30.82:464,31,0	0/0:6,0:10:3:0,3,28	1/1:11,5:16:14.97:178,15,0	1/1:9,8:19:6.96:275,7,0	1/1:24,12:40:17.80:364,18,0	0/0:20,0:20:18.05:0,18,257	0/1:23,2:25:46.43:46,0,279	0/0:36,0:36:36.05:0,36,482	0/0:18,0:18:18.05:0,18,258	1/1:12,0:12:13.52:116,14,0	1/1:9,6:15:9.92:213,10,0	1/1:5,4:10:5.98:91,6,0
chr10	86095082	.	ATTT	A	2763.61	PASS	AB=0.568;AC=23;AF=0.411;AN=56;BaseQRankSum=1.190;DP=465;FS=5.889;HRun=16;HaplotypeScore=74.8094;InbreedingCoeff=0.8965;MQ=71.62;MQ0=7;MQRankSum=-4.069;QD=14.78;ReadPosRankSum=4.553;VQSLOD=2.1053;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:39:86.98:0,87,707	1/1:0,3:3:9.02:97,9,0	0/0:24,0:13:12.04:0,12,191	0/0:19,0:13:11.53:0,12,138	0/0:19,0:23:44.17:0,44,691	0/0:11,0:11:21.07:0,21,364	0/0:12,0:16:39.03:0,39,513	1/1:5,13:18:29.74:300,30,0	0/0:14,0:15:32.10:0,32,460	1/1:4,13:16:35.94:388,36,0	1/1:5,15:21:38.83:405,39,0	0/0:14,0:15:30.08:0,30,480	0/0:18,0:20:51.10:0,51,754	0/0:13,0:13:21.07:0,21,362	0/0:10,0:11:30.08:0,30,457	0/0:12,0:13:36.07:0,36,525	1/1:1,14:14:30.08:323,30,0	0/1:5,1:21:12.60:13,0,36	1/1:8,5:12:11.78:129,12,0	1/1:6,7:13:10.33:126,10,0	1/1:1,9:11:22.51:256,23,0	0/0:10,0:10:16.30:0,16,240	0/0:7,0:11:26.82:0,27,376	0/0:15,0:15:33.57:0,34,556	0/0:20,0:20:54.15:0,54,892	1/1:6,10:15:29.95:323,30,0	1/1:6,11:19:17.87:220,18,0	1/1:3,13:17:38.94:405,39,0
chr10	86095595	.	TG	T	11044.78	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=19.964;DP=687;FS=18.641;HRun=1;HaplotypeScore=94.6730;InbreedingCoeff=0.9955;MQ=72.20;MQ0=0;MQRankSum=-7.825;QD=37.19;ReadPosRankSum=0.376;VQSLOD=3.0148;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,43:43:99:1446,111,0	1/1:0,4:4:12.04:167,12,0	0/0:15,0:15:45.14:0,45,696	0/0:18,0:18:42.08:0,42,626	0/0:22,0:22:63.18:0,63,955	0/0:23,0:23:69.22:0,69,1079	0/0:36,0:36:99:0,105,1597	1/1:0,30:30:90.29:1239,90,0	0/0:31,0:31:93.30:0,93,1462	1/1:0,25:25:69.20:929,69,0	1/1:0,23:23:60.03:769,60,0	0/0:33,0:33:99:0,99,1551	0/0:27,0:27:81.26:0,81,1268	0/0:21,0:21:63.20:0,63,983	0/0:40,0:40:99:0,117,1818	0/0:31,0:31:93.32:0,93,1484	1/1:0,27:27:72.24:999,72,0	1/1:0,18:18:48.16:670,48,0	1/1:0,20:20:60.20:833,60,0	1/1:0,16:16:47.92:616,48,0	1/1:0,30:30:81.07:1057,81,0	0/0:21,0:21:63.16:0,63,910	0/0:25,0:25:75.22:0,75,1138	0/0:29,0:29:87.28:0,87,1365	0/0:18,0:18:54.17:0,54,840	1/1:0,14:13:39.13:545,39,0	1/1:0,38:38:99:1441,105,0	1/1:0,9:9:24.08:335,24,0
chr10	86100530	.	G	GGTTT	18869.32	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-13.040;DP=755;FS=5.192;HRun=0;HaplotypeScore=113.4071;InbreedingCoeff=0.9854;MQ=73.96;MQ0=4;MQRankSum=0.291;QD=49.40;ReadPosRankSum=-0.039;VQSLOD=5.7441;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,24:33:30.55:1478,31,0	1/1:1,16:17:48.16:1190,48,0	0/0:30,0:26:32.74:0,33,597	0/0:24,0:20:38.52:0,39,491	0/0:26,0:26:72.23:0,72,1241	0/0:22,0:22:51.17:0,51,908	0/0:18,0:18:45.15:0,45,774	1/1:13,23:36:87.23:1818,87,0	0/0:25,0:25:69.22:0,69,1171	1/1:5,38:43:99:2856,120,0	1/1:1,12:14:33.58:826,34,0	0/0:28,0:28:69.24:0,69,1216	0/0:23,0:23:63.20:0,63,1093	0/0:23,0:23:63.21:0,63,1086	0/0:28,0:28:78.26:0,78,1352	0/0:29,0:29:81.26:0,81,1389	1/1:4,41:44:84.25:2092,84,0	1/1:6,10:16:30.07:674,30,0	1/1:10,23:35:80.92:1769,81,0	1/1:4,19:23:54.18:1282,54,0	1/1:7,26:33:42.14:1038,42,0	0/0:26,0:26:75.26:0,75,1311	0/0:15,0:15:36.12:0,36,635	0/0:32,0:32:87.27:0,87,1475	0/0:24,0:24:69.23:0,69,1199	1/1:6,25:35:36.87:1878,37,0	1/1:10,27:40:72.25:1817,72,0	1/1:2,7:9:6.02:153,6,0
chr10	86100571	.	GTTTTTGT	G	744.73	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.181;DP=706;FS=8.521;HRun=0;HaplotypeScore=191.9003;InbreedingCoeff=0.9664;MQ=63.74;MQ0=10;MQRankSum=-5.251;QD=49.65;ReadPosRankSum=-0.617;VQSLOD=2.8212;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,6:15:45.15:840,45,0	0/0:22,0:22:57.20:0,57,2020	0/0:37,0:22:21.26:0,21,947	0/0:40,0:17:40.64:0,41,818	0/0:30,0:30:78.22:0,78,2544	0/0:27,0:28:84.29:0,84,2878	0/0:21,0:21:63.22:0,63,1941	0/0:31,0:30:78.25:0,78,2267	0/0:14,0:14:39.13:0,39,1277	0/0:44,0:44:99:0,129,4645	0/0:19,0:19:48.64:0,49,1665	0/0:21,0:21:57.19:0,57,1909	0/0:17,0:17:51.15:0,51,1445	0/0:23,0:23:66.23:0,66,2205	0/0:24,0:24:72.25:0,72,2150	0/0:25,0:25:75.26:0,75,2513	0/0:43,0:43:99:0,120,4069	0/0:24,0:24:69.24:0,69,2535	0/0:36,0:34:87.28:0,87,2579	0/0:19,0:19:52.05:0,52,1654	0/0:18,0:17:48.16:0,48,1688	0/0:26,0:25:69.22:0,69,2395	0/0:13,0:13:36.08:0,36,1287	0/0:24,0:24:72.20:0,72,2439	0/0:19,0:19:54.15:0,54,1621	0/0:33,0:33:96.33:0,96,3449	0/0:36,0:36:99:0,99,3207	0/0:4,0:4:12.04:0,12,476
chr10	86100572	.	T	TG	96.71	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.099;DP=706;FS=8.835;HRun=1;HaplotypeScore=112.8286;InbreedingCoeff=0.9503;MQ=64.44;MQ0=11;MQRankSum=-4.472;QD=6.45;ReadPosRankSum=-1.292;VQSLOD=-0.3796;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,8:15:14.08:184,14,0	0/0:20,0:20:60.19:0,60,823	0/0:36,0:21:47.06:0,47,482	0/0:42,0:18:40.79:0,41,455	0/0:30,0:30:78.22:0,78,1053	0/0:28,0:28:83.77:0,84,1141	0/0:21,0:21:63.19:0,63,845	0/0:31,0:30:87.16:0,87,1127	0/0:15,0:15:42.13:0,42,568	0/0:44,0:44:99:0,132,1818	0/0:19,0:19:54.16:0,54,721	0/0:20,0:20:60.19:0,60,823	0/0:17,0:17:51.16:0,51,698	0/0:24,0:24:69.22:0,69,949	0/0:24,0:24:72.22:0,72,984	0/0:25,0:25:75.25:0,75,1049	0/0:43,0:43:99:0,126,1658	0/0:25,0:25:69.23:0,69,964	0/0:36,0:34:96.24:0,96,1233	0/0:20,0:20:51.13:0,51,695	0/0:18,0:17:51.16:0,51,697	0/0:25,0:24:72.23:0,72,977	0/0:12,0:12:36.07:0,36,479	0/0:24,0:24:72.21:0,72,972	0/0:20,0:20:54.14:0,54,693	0/0:33,0:33:99:0,99,1360	0/0:35,0:35:99:0,99,1366	0/0:4,0:4:12.04:0,12,168
chr10	86100577	.	GT	G	108.22	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.873;DP=709;FS=3.236;HRun=5;HaplotypeScore=112.1965;InbreedingCoeff=0.9505;MQ=63.73;MQ0=11;MQRankSum=-4.063;QD=6.37;ReadPosRankSum=0.389;VQSLOD=-0.1169;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,8:17:38.85:203,39,0	0/0:20,0:20:60.20:0,60,819	0/0:39,0:20:32.55:0,33,418	0/0:42,0:19:9.93:0,10,296	0/0:30,0:30:72.24:0,72,976	0/0:28,0:28:78.17:0,78,1041	0/0:21,0:21:63.19:0,63,842	0/0:25,1:26:56.90:0,57,899	0/0:15,0:15:42.13:0,42,557	0/0:44,0:44:99:0,129,1759	0/0:19,0:19:51.16:0,51,681	0/0:19,0:19:54.17:0,54,723	0/0:16,0:16:42.14:0,42,568	0/0:26,0:26:75.21:0,75,975	0/0:23,0:23:63.19:0,63,839	0/0:27,0:27:78.22:0,78,1015	0/0:41,0:41:99:0,118,1562	0/0:26,0:26:74.87:0,75,974	0/0:33,0:31:84.27:0,84,1131	0/0:21,0:21:51:0,51,694	0/0:18,0:17:48.16:0,48,655	0/0:24,0:23:66.22:0,66,900	0/0:14,0:14:39.13:0,39,532	0/0:23,0:23:66.22:0,66,902	0/0:17,0:17:48.16:0,48,642	0/0:33,0:33:96.32:0,96,1307	0/0:37,0:37:99:0,102,1303	0/0:10,0:10:21.65:0,22,356
chr10	86100863	.	T	TTTC	316.87	PASS	AB=0.974;AC=14;AF=0.250;AN=56;BaseQRankSum=6.365;DP=520;FS=36.232;HRun=0;HaplotypeScore=83.0032;InbreedingCoeff=-0.0642;MQ=52.81;MQ0=40;MQRankSum=-1.252;QD=1.16;ReadPosRankSum=3.990;VQSLOD=-0.0413;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:22,10:29:36.28:142,0,36	1/1:4,0:4:4.31:19,4,0	0/0:34,0:6:2.48:0,2,46	0/1:36,0:10:4.55:5,0,96	0/0:28,0:28:67.88:0,68,517	0/0:18,0:17:39.05:0,39,305	0/0:15,0:14:29.75:0,30,293	0/1:35,0:32:26.24:26,0,130	0/0:10,0:9:21.06:0,21,153	0/1:18,0:16:12.86:13,0,167	0/0:16,0:16:0.38:0,0,113	0/0:13,0:13:30.94:0,31,213	0/0:3,0:3:5.37:0,5,33	0/0:9,0:9:20.61:0,21,154	0/0:13,0:11:29.23:0,29,214	0/0:15,0:15:38.98:0,39,405	0/1:30,0:24:41.72:71,0,42	0/0:12,0:12:32.72:0,33,294	0/1:31,0:26:56.42:56,0,150	0/1:18,0:18:43.04:43,0,56	1/1:10,0:8:4.40:17,4,0	0/0:8,0:7:20.88:0,21,202	0/0:20,0:18:49.21:0,49,406	0/0:11,0:7:15:0,15,132	0/0:21,0:19:38.95:0,39,330	0/1:25,0:25:15.22:15,0,100	0/1:21,0:16:38.08:38,0,63	0/1:12,0:12:17.42:22,0,17
chr10	86100864	.	T	TTTC	3887.44	PASS	AB=0.879;AC=22;AF=0.393;AN=56;BaseQRankSum=-9.559;DP=530;FS=16.417;HRun=0;HaplotypeScore=74.5364;InbreedingCoeff=0.7070;MQ=51.50;MQ0=42;MQRankSum=5.737;QD=13.05;ReadPosRankSum=4.643;VQSLOD=1.8908;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:29:15.72:16,0,51	1/1:1,3:5:5.78:106,6,0	0/0:33,0:5:8.93:0,9,70	0/1:36,0:10:3.25:3,0,102	0/0:28,0:28:67.75:0,68,512	0/0:18,0:17:39.06:0,39,304	0/0:15,0:14:29.90:0,30,296	1/1:18,18:34:42.21:546,42,0	0/0:10,0:9:23.17:0,23,160	0/1:6,12:16:0.75:350,0,1	1/1:16,1:18:20.52:283,21,0	0/0:13,0:13:30.56:0,31,212	0/0:3,0:3:5.50:0,5,35	0/0:9,0:9:20.08:0,20,152	0/0:13,0:11:32.20:0,32,237	0/0:15,0:15:41.97:0,42,427	1/1:11,20:26:9.81:458,10,0	0/0:12,0:12:29.75:0,30,274	1/1:9,20:26:13.66:609,14,0	1/1:3,14:17:36.69:481,37,0	1/1:5,6:9:5.59:64,6,0	0/0:9,0:8:22.92:0,23,208	0/0:20,0:18:52.15:0,52,426	0/0:12,0:7:15:0,15,132	0/0:22,0:19:38.47:0,38,325	1/1:5,19:25:28.08:533,28,0	0/1:20,2:17:4.83:179,0,5	1/1:3,9:12:18.02:259,18,0
chr10	86100865	.	T	TTC	2594.97	PASS	AB=0.978;AC=22;AF=0.393;AN=56;BaseQRankSum=-6.687;DP=527;FS=15.424;HRun=0;HaplotypeScore=69.6310;InbreedingCoeff=0.7585;MQ=51.06;MQ0=45;MQRankSum=6.556;QD=9.94;ReadPosRankSum=3.142;VQSLOD=1.9339;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:30:24.27:0,24,160	1/1:5,0:5:5.77:53,6,0	0/0:33,0:5:8.77:0,9,55	0/1:36,0:10:2.45:2,0,96	0/0:28,0:28:68.74:0,69,522	0/0:16,0:15:38.96:0,39,293	0/0:16,0:14:35.27:0,35,302	1/1:35,1:34:9.63:415,10,0	0/0:11,0:9:25.79:0,26,182	1/1:18,0:16:5.36:256,5,0	1/1:9,9:18:15.99:244,16,0	0/0:12,0:12:29.84:0,30,225	0/0:2,0:2:5.84:0,6,41	0/0:9,0:9:20.59:0,21,156	0/0:13,0:11:32.65:0,33,251	0/0:14,0:14:41.98:0,42,412	1/1:29,3:26:33.51:343,34,0	0/0:12,0:12:29.18:0,29,253	1/1:29,1:25:2.97:402,3,0	1/1:16,1:16:17.90:300,18,0	1/1:9,0:7:5.37:38,5,0	0/0:9,0:8:23.42:0,23,205	0/0:20,0:18:52.96:0,53,437	0/0:13,0:8:15:0,15,133	0/0:22,0:19:47.75:0,48,378	1/1:25,0:25:35.19:434,35,0	0/1:21,1:17:25.28:116,0,25	1/1:10,2:12:18.03:192,18,0
chr10	86100866	.	T	TC	1357.18	PASS	AB=0.958;AC=15;AF=0.268;AN=56;BaseQRankSum=-3.812;DP=525;FS=21.421;HRun=0;HaplotypeScore=67.1998;InbreedingCoeff=0.3598;MQ=50.92;MQ0=47;MQRankSum=6.789;QD=6.09;ReadPosRankSum=2.956;VQSLOD=1.3158;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:30:42.71:0,43,267	0/1:5,0:5:10.85:16,0,11	0/0:32,0:5:8.91:0,9,62	0/0:36,0:10:19.06:0,19,120	0/0:27,0:27:69.81:0,70,545	0/0:16,0:15:44.67:0,45,340	0/0:16,0:14:34.90:0,35,293	0/1:36,0:33:61.98:234,0,62	0/0:11,0:9:25.61:0,26,178	1/1:18,0:16:12.59:181,13,0	0/1:17,1:18:0.21:151,0,0	0/0:12,0:12:29.56:0,30,214	0/0:2,0:2:5.97:0,6,47	0/0:10,0:9:23.32:0,23,186	0/0:13,0:11:32.72:0,33,250	0/0:14,0:14:41.95:0,42,390	0/1:32,0:26:23.05:98,0,23	0/0:12,0:12:29.59:0,30,238	0/1:29,0:24:34.34:224,0,34	1/1:16,1:16:4.75:170,5,0	0/1:9,0:7:3.97:7,0,4	0/0:9,0:8:23.88:0,24,210	0/0:20,0:18:53.72:0,54,455	0/0:13,0:8:17.99:0,18,156	0/0:22,0:19:48.63:0,49,354	1/1:25,0:25:1.70:306,2,0	0/1:15,7:17:56.66:57,0,90	1/1:12,0:12:16.77:79,17,0
chr10	86101383	.	GA	G	2390.77	PASS	AB=1.000;AC=27;AF=0.500;AN=54;BaseQRankSum=10.113;DP=346;FS=1.063;HRun=8;HaplotypeScore=72.7015;InbreedingCoeff=0.8491;MQ=48.79;MQ0=17;MQRankSum=-11.380;QD=14.85;ReadPosRankSum=1.292;VQSLOD=3.7451;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,7:11:14.84:143,15,0	1/1:3,3:6:6.01:58,6,0	./.	0/1:9,0:3:7.49:7,0,26	0/0:14,0:14:24.07:0,24,290	0/0:17,0:16:30.09:0,30,362	0/0:15,0:13:30.09:0,30,362	1/1:4,12:15:36.05:347,36,0	0/0:11,0:11:11.98:0,12,127	1/1:3,9:11:27.04:260,27,0	1/1:0,3:3:6:55,6,0	0/0:8,0:6:6.02:0,6,72	0/0:11,0:11:27:0,27,275	0/0:9,0:8:11.99:0,12,129	0/0:15,0:13:36.07:0,36,386	0/0:16,0:16:36.07:0,36,386	1/1:9,8:16:17.98:172,18,0	1/1:8,5:11:12.16:145,12,0	1/1:5,11:15:33.03:311,33,0	1/1:1,15:15:36.05:345,36,0	1/1:2,3:4:3:29,3,0	0/0:9,0:9:21.06:0,21,253	0/0:16,0:16:36.58:0,37,435	0/0:18,0:17:42.10:0,42,484	0/0:18,0:18:45.12:0,45,530	1/1:3,9:10:20.71:183,21,0	1/1:2,10:11:27.04:260,27,0	1/1:1,10:10:30.05:289,30,0
chr10	86101395	.	CCAAAAAAACAAA	C	3899.62	PASS	AB=0.882;AC=16;AF=0.286;AN=56;BaseQRankSum=9.545;DP=372;FS=1.957;HRun=0;HaplotypeScore=134.6995;InbreedingCoeff=0.7702;MQ=54.21;MQ0=16;MQRankSum=-9.089;QD=39.79;ReadPosRankSum=5.332;VQSLOD=3.0437;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:17:31.10:0,31,1056	0/0:3,0:3:3:0,3,83	0/0:19,0:4:8.77:0,9,122	0/0:15,0:6:4.05:0,4,52	0/0:17,0:17:48.16:0,48,2234	0/0:18,0:18:42.14:0,42,2203	0/0:14,0:13:35.87:0,36,1599	1/1:13,0:12:23.98:519,24,0	0/0:10,0:10:15.05:0,15,844	0/1:11,0:10:0:0,0,311	0/0:10,0:9:18.04:0,18,537	0/0:11,0:9:12:0,12,399	0/0:12,0:12:30.09:0,30,1503	0/0:10,0:9:15.05:0,15,715	0/0:16,0:14:36.12:0,36,1885	0/0:15,0:15:33.58:0,34,1733	0/0:23,0:21:49.65:0,50,1237	0/1:9,4:11:57.28:487,0,57	1/1:12,0:12:20.99:431,21,0	1/1:12,0:12:21.03:512,21,0	1/1:4,0:3:6.02:126,6,0	0/0:8,0:8:21.07:0,21,1115	0/0:22,0:22:51.15:0,51,2268	0/0:16,0:15:45.13:0,45,2209	0/0:16,0:16:48.15:0,48,2323	1/1:12,0:9:15.01:365,15,0	1/1:10,0:9:24.08:730,24,0	1/1:11,0:10:24.08:730,24,0
chr10	86101396	.	CAAAAAAACAAACAAA	C	5786.34	PASS	AB=0.938;AC=15;AF=0.268;AN=56;BaseQRankSum=8.150;DP=403;FS=0.529;HRun=0;HaplotypeScore=162.3570;InbreedingCoeff=0.8202;MQ=53.25;MQ0=16;MQRankSum=-9.363;QD=56.73;ReadPosRankSum=3.213;VQSLOD=4.5574;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:46.67:0,47,1615	0/0:3,0:3:3.01:0,3,126	0/0:20,0:5:12.01:0,12,185	0/0:15,0:6:5.82:0,6,110	0/0:17,0:17:48.16:0,48,2886	0/0:18,0:18:42.14:0,42,2764	0/0:15,0:14:39.06:0,39,2085	1/1:12,5:16:36.02:961,36,0	0/0:11,0:11:18.06:0,18,1138	0/0:14,0:13:9.09:0,9,556	0/0:12,0:11:21.06:0,21,762	0/0:10,0:9:15.01:0,15,624	0/0:11,0:12:30.10:0,30,1940	0/0:10,0:9:15.05:0,15,940	0/0:17,0:15:39.13:0,39,2441	0/0:14,0:14:33.58:0,34,2185	0/0:23,0:21:51.17:0,51,1902	0/1:14,0:13:99:212,0,267	1/1:10,5:14:27.01:729,27,0	1/1:5,6:12:21.03:712,21,0	1/1:2,2:3:6.02:199,6,0	0/0:8,0:8:24.08:0,24,1503	0/0:23,0:23:54.18:0,54,3064	0/0:18,0:17:51.15:0,51,2937	0/0:17,0:17:51.16:0,51,3043	1/1:10,4:11:21.03:653,21,0	1/1:6,8:13:36.12:1299,36,0	1/1:3,8:10:24.08:1022,24,0
chr10	86101403	.	AC	A	1432.58	PASS	AB=0.962;AC=27;AF=0.482;AN=56;BaseQRankSum=12.598;DP=392;FS=7.504;HRun=1;HaplotypeScore=81.9088;InbreedingCoeff=0.8461;MQ=57.88;MQ0=12;MQRankSum=-10.207;QD=7.83;ReadPosRankSum=-0.993;VQSLOD=0.0949;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:23:27.64:181,28,0	1/1:1,1:2:5.99:51,6,0	0/1:24,1:7:18.90:19,0,45	0/0:15,0:6:5.84:0,6,47	0/0:18,0:18:51.03:0,51,639	0/0:18,0:18:42.14:0,42,575	0/0:14,0:13:28.10:0,28,399	1/1:14,0:13:31.17:148,31,0	0/0:12,0:12:26.55:0,27,269	1/1:12,1:12:30.21:233,30,0	1/1:5,5:9:11.43:129,11,0	0/0:10,0:8:12:0,12,133	0/0:11,0:11:27.41:0,27,320	0/0:10,0:9:17.31:0,17,155	0/0:15,0:15:35.51:0,36,450	0/0:14,0:14:36.09:0,36,473	1/1:21,1:20:36.02:308,36,0	1/1:14,1:13:3.46:63,3,0	1/1:13,0:12:26.23:135,26,0	1/1:8,0:8:18.85:86,19,0	1/1:3,0:2:5.05:19,5,0	0/0:11,0:11:33.04:0,33,389	0/0:25,0:25:65.93:0,66,789	0/0:18,0:18:39.47:0,39,594	0/0:18,0:18:54.01:0,54,672	1/1:11,0:9:15.43:65,15,0	1/1:14,0:13:31.25:125,31,0	1/1:9,0:8:21.43:91,21,0
chr10	86101407	.	AC	A	1012.57	PASS	AB=0.972;AC=26;AF=0.464;AN=56;BaseQRankSum=10.751;DP=393;FS=13.696;HRun=1;HaplotypeScore=83.9430;InbreedingCoeff=0.6963;MQ=58.73;MQ0=9;MQRankSum=-7.839;QD=6.03;ReadPosRankSum=0.413;VQSLOD=-0.7288;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:23:31.93:191,32,0	1/1:1,1:2:6:52,6,0	0/0:25,0:7:3.27:0,3,49	0/0:15,0:6:5.24:0,5,49	0/0:18,0:18:45.82:0,46,445	0/0:18,0:18:39.27:0,39,450	0/0:15,0:14:21.45:0,21,323	1/1:11,0:11:7.17:38,7,0	0/1:14,0:14:13.20:13,0,236	1/1:12,1:12:30.61:232,31,0	1/1:10,2:11:17.03:148,17,0	0/0:11,0:9:10.44:0,10,91	0/0:11,0:11:23.33:0,23,250	0/0:11,0:10:3.59:0,4,99	0/0:15,0:15:14.03:0,14,301	0/0:13,0:13:36.01:0,36,362	1/1:21,1:20:41.09:312,41,0	0/1:15,1:16:9.64:10,0,180	1/1:10,0:9:9.74:36,10,0	1/1:7,0:7:11.57:39,12,0	1/1:3,0:3:1.76:7,2,0	0/0:12,0:12:35.88:0,36,364	0/0:25,0:25:68.58:0,69,710	0/0:18,0:17:22.28:0,22,388	0/0:18,0:18:53.91:0,54,547	1/1:10,0:9:1.01:12,1,0	1/1:15,0:15:17.15:60,17,0	1/1:8,0:8:18.97:63,19,0
chr10	86101408	.	CAAA	C	1161.08	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=10.638;DP=401;FS=6.267;HRun=13;HaplotypeScore=96.8128;InbreedingCoeff=0.8167;MQ=59.84;MQ0=9;MQRankSum=-8.878;QD=14.16;ReadPosRankSum=3.195;VQSLOD=2.2699;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:43.03:0,43,458	0/0:2,0:2:2.37:0,2,9	0/0:27,0:8:11.33:0,11,81	0/0:15,0:6:3.01:0,3,41	0/0:15,0:18:48.06:0,48,735	0/0:19,0:19:45.08:0,45,744	0/0:15,0:14:36.08:0,36,635	1/1:7,3:11:28.16:273,28,0	0/0:15,0:15:33.38:0,33,555	0/0:15,0:14:22.82:0,23,173	0/0:12,0:11:22.22:0,22,235	0/0:11,0:10:20.97:0,21,293	0/0:11,0:11:27.09:0,27,504	0/0:9,0:10:21.04:0,21,318	0/0:15,0:15:42.11:0,42,741	0/0:14,0:14:33.10:0,33,604	0/0:22,0:20:25.39:0,25,376	0/1:18,0:17:31.60:32,0,293	1/1:6,4:9:11.99:178,12,0	1/1:7,0:7:17.91:145,18,0	1/1:3,0:3:5.98:57,6,0	0/0:11,0:12:34.34:0,34,542	0/0:23,0:25:60.16:0,60,1075	0/0:18,0:17:45.11:0,45,709	0/0:17,0:17:45.14:0,45,784	1/1:5,4:9:20.90:181,21,0	1/1:8,7:15:35.67:317,36,0	1/1:8,0:8:23.81:169,24,0
chr10	86101410	.	A	AC	124.61	PASS	AB=0.961;AC=6;AF=0.107;AN=56;BaseQRankSum=3.111;DP=400;FS=11.840;HRun=0;HaplotypeScore=90.9565;InbreedingCoeff=0.1526;MQ=61.41;MQ0=7;MQRankSum=-3.346;QD=2.15;ReadPosRankSum=-4.135;VQSLOD=-0.2391;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:46.30:0,46,331	0/0:2,0:2:5.99:0,6,50	0/0:28,0:9:11.78:0,12,107	0/0:15,0:6:5.72:0,6,55	0/0:18,0:18:51.02:0,51,581	0/0:18,0:18:48.08:0,48,591	0/0:13,0:13:35.99:0,36,448	0/1:9,4:13:10.48:113,0,10	0/0:13,0:13:33.37:0,33,408	0/0:15,0:14:36.21:0,36,273	0/0:12,0:11:26.76:0,27,213	0/0:11,0:10:19.84:0,20,200	0/0:12,0:12:22.04:0,22,350	0/0:11,0:11:21.04:0,21,244	0/0:15,0:15:42.11:0,42,545	0/0:14,0:14:39.10:0,39,493	0/0:22,0:20:52.16:0,52,407	0/0:18,0:17:46.45:0,46,421	0/1:10,0:9:6.82:64,0,7	0/1:7,0:7:3.24:3,0,21	0/1:3,0:3:1.76:9,0,2	0/0:13,0:13:36.01:0,36,425	0/0:25,0:25:62.74:0,63,800	0/0:18,0:17:51.10:0,51,587	0/0:17,0:17:51.12:0,51,629	0/1:10,0:9:4.15:18,0,4	0/1:15,0:15:25.69:34,0,26	0/0:8,0:8:17.76:0,18,56
chr10	86105790	.	T	TC	756.16	PASS	AC=40;AF=0.952;AN=42;BaseQRankSum=-1.955;DP=68;FS=0.000;HRun=0;HaplotypeScore=16.4710;InbreedingCoeff=0.1352;MQ=51.70;MQ0=0;MQRankSum=-1.148;QD=11.46;ReadPosRankSum=-0.093;VQSLOD=3.1924;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:1.80:10,2,0	1/1:2,0:2:3:25,3,0	0/0:0,0:1:2.96:0,3,19	./.	1/1:3,0:3:8.83:63,9,0	1/1:2,0:2:5.99:49,6,0	1/1:6,0:6:13.88:70,14,0	1/1:2,0:2:5.92:39,6,0	./.	1/1:6,0:5:14.98:133,15,0	1/1:1,0:1:3:25,3,0	1/1:1,0:1:3:25,3,0	1/1:2,0:2:2.99:24,3,0	./.	1/1:4,0:4:2.68:11,3,0	./.	1/1:0,8:9:9.03:133,9,0	1/1:1,5:6:4.17:23,4,0	1/1:4,0:3:8.83:57,9,0	1/1:2,0:2:2.94:18,3,0	./.	1/1:2,0:2:3:25,3,0	1/1:3,0:2:0.89:2,1,0	1/1:2,0:2:2.84:14,3,0	1/1:0,2:2:3.01:43,3,0	1/1:2,0:2:6.01:56,6,0	./.	./.
chr10	86106214	.	GAC	G	701.16	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.726;DP=735;FS=9.281;HRun=0;HaplotypeScore=109.9735;InbreedingCoeff=0.9538;MQ=55.95;MQ0=38;MQRankSum=1.115;QD=12.98;ReadPosRankSum=0.512;VQSLOD=3.0104;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,5:35:22.20:382,22,0	0/0:8,0:8:12.04:0,12,164	0/0:87,0:15:24.78:0,25,273	0/0:94,0:20:21.33:0,21,228	0/0:22,0:22:60.04:0,60,909	0/0:10,0:10:20.90:0,21,312	0/0:35,0:35:90.79:0,91,1447	0/0:21,0:21:43.96:0,44,662	0/0:31,0:31:77.93:0,78,1263	0/0:23,0:22:60.15:0,60,902	0/0:17,0:17:18.15:0,18,234	0/0:25,0:25:74.84:0,75,1161	0/0:20,0:20:35.62:0,36,664	0/0:25,0:25:69.22:0,69,1119	0/0:25,0:25:59.77:0,60,941	0/0:18,1:19:48.04:0,48,715	0/0:24,0:24:55.85:0,56,746	1/1:19,0:18:41.25:440,41,0	0/0:12,0:12:24.04:0,24,349	0/0:8,0:8:12.04:0,12,196	0/0:47,0:47:69.04:0,69,997	0/0:20,0:20:57.19:0,57,906	0/0:13,0:13:32.68:0,33,468	0/0:30,0:30:81.20:0,81,1258	0/0:19,0:19:41.93:0,42,614	0/0:21,0:19:48.16:0,48,749	0/0:17,0:17:36.10:0,36,506	0/0:7,0:7:17.99:0,18,198
chr10	86106254	.	T	TGTGTGTGTGTGTGTGTGTGC	9118.12	PASS	AB=0.980;AC=14;AF=0.250;AN=56;BaseQRankSum=6.881;DP=608;FS=4.592;HRun=0;HaplotypeScore=280.3233;InbreedingCoeff=0.0246;MQ=51.25;MQ0=14;MQRankSum=-7.648;QD=36.47;ReadPosRankSum=-3.463;VQSLOD=3.1768;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:37:54.15:329,0,54	0/1:14,0:14:88.33:344,0,88	0/0:32,0:7:8.68:0,9,78	0/0:45,0:8:13.36:0,13,88	0/0:20,0:20:60.12:0,60,2199	0/0:14,0:14:39.08:0,39,1556	0/0:23,0:23:69.16:0,69,2794	0/1:25,0:25:99:690,0,249	0/0:29,0:29:84.19:0,84,3621	0/1:23,0:22:99:1108,0,180	0/0:19,0:19:10.88:0,11,96	0/0:22,0:22:63.15:0,63,2481	0/0:19,0:19:57.14:0,57,2497	0/0:21,0:21:60.16:0,60,2724	0/0:24,0:24:66.20:0,66,3125	0/0:17,0:17:46:0,46,1901	0/1:22,0:22:99:675,0,134	1/1:4,8:21:13.54:958,14,0	0/1:9,0:9:43.75:599,0,44	0/1:14,0:14:7.93:8,0,75	1/1:25,0:25:11.10:147,11,0	0/0:16,0:16:45.04:0,45,1997	0/0:13,0:13:29.22:0,29,1272	0/0:24,0:24:63.10:0,63,2768	0/0:18,0:18:13.99:0,14,1684	0/1:26,0:23:99:2241,0,185	0/1:26,0:26:99:1559,0,126	0/1:8,0:8:43.73:460,0,44
chr10	86107301	.	TGAG	T	1727	PASS	AB=0.713;AC=10;AF=0.179;AN=56;BaseQRankSum=2.535;DP=433;FS=32.971;HRun=0;HaplotypeScore=74.1098;InbreedingCoeff=-0.2187;MQ=60.86;MQ0=13;MQRankSum=-8.077;QD=11.44;ReadPosRankSum=-4.944;VQSLOD=0.6350;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:53.10:0,53,797	0/1:4,3:5:44.91:45,0,105	0/0:42,0:14:32.44:0,32,365	0/0:31,0:11:12.87:0,13,73	0/0:14,0:14:39.13:0,39,717	0/0:12,0:12:30.10:0,30,568	0/0:12,0:12:26.62:0,27,496	0/1:16,10:22:99:406,0,310	0/0:21,0:19:56.14:0,56,977	0/1:11,3:14:99:164,0,420	0/1:3,4:6:91.97:144,0,92	0/0:13,0:13:32.80:0,33,539	0/0:11,0:11:33.08:0,33,570	0/0:8,0:8:24.08:0,24,435	0/0:12,0:11:33.10:0,33,574	0/0:12,0:12:36.12:0,36,675	0/1:17,4:21:7.03:7,0,737	0/1:7,1:7:31.51:32,0,296	0/1:9,9:16:99:276,0,314	0/0:8,0:7:15.05:0,15,299	0/0:4,2:5:12.02:0,12,196	0/0:11,0:10:30.08:0,30,469	0/0:9,0:9:27.09:0,27,498	0/0:20,0:20:51.14:0,51,904	0/0:12,0:12:11.69:0,12,507	0/1:13,6:18:99:208,0,494	0/1:2,8:6:82.08:96,0,82	0/1:5,14:17:99:493,0,185
chr10	86107595	.	C	CA	860.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.991;DP=553;FS=3.584;HRun=7;HaplotypeScore=54.9889;InbreedingCoeff=0.9877;MQ=78.51;MQ0=0;MQRankSum=-2.131;QD=22.07;ReadPosRankSum=1.190;VQSLOD=3.4023;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,32:39:81.16:956,81,0	0/0:7,0:7:21.03:0,21,198	0/0:16,0:16:26.94:0,27,348	0/0:18,0:18:28.47:0,28,214	0/0:24,0:24:63.05:0,63,585	0/0:26,0:26:72.10:0,72,690	0/0:24,0:24:63.09:0,63,604	0/0:32,0:32:81.09:0,81,767	0/0:21,0:21:57.02:0,57,525	0/0:20,0:20:54.08:0,54,521	0/0:9,0:9:20.93:0,21,182	0/0:13,0:13:33.04:0,33,313	0/0:17,0:17:45.07:0,45,434	0/0:19,0:19:50.43:0,50,465	0/0:19,0:19:48.07:0,48,463	0/0:24,0:24:60.09:0,60,579	0/0:37,0:37:90.05:0,90,851	0/0:20,0:20:57.06:0,57,542	0/0:13,0:13:35.99:0,36,332	0/0:16,0:16:36.04:0,36,347	0/0:16,0:16:32.97:0,33,301	0/0:15,0:15:39.05:0,39,371	0/0:14,0:14:30.02:0,30,283	0/0:16,0:15:42.07:0,42,405	0/0:10,0:10:27.03:0,27,256	0/0:24,0:24:57.06:0,57,542	0/0:25,0:25:66.09:0,66,632	0/0:19,0:19:57.04:0,57,540
chr10	86107836	.	GAGAGAC	G	2258.63	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=0.813;DP=528;FS=1.162;HRun=0;HaplotypeScore=109.6302;InbreedingCoeff=0.6328;MQ=58.19;MQ0=29;MQRankSum=-3.362;QD=16.25;ReadPosRankSum=-1.783;VQSLOD=2.9239;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:14.57:0,15,420	1/1:3,0:3:9:94,9,0	0/0:17,0:7:14.98:0,15,155	0/0:32,0:12:21.09:0,21,191	0/0:23,0:21:60.19:0,60,1651	0/0:24,0:24:69.20:0,69,1663	0/0:22,0:21:57.15:0,57,1507	0/1:38,0:27:99:172,0,717	0/0:19,0:18:54.02:0,54,1508	1/1:1,19:19:48.12:865,48,0	1/1:2,14:16:21.07:395,21,0	0/0:9,0:9:27.08:0,27,623	0/0:18,0:18:50.95:0,51,1093	0/0:17,0:17:34.42:0,34,1029	0/0:18,0:18:51.17:0,51,1510	0/0:22,0:22:63.16:0,63,1388	1/1:3,26:29:34.93:780,35,0	0/0:11,0:10:20.94:0,21,282	0/1:20,0:18:99:115,0,528	0/0:16,0:15:42.14:0,42,939	0/0:20,0:17:21.07:0,21,417	0/0:1,0:1:3.01:0,3,97	0/1:13,0:13:3.23:3,0,923	0/0:25,0:25:66.23:0,66,1860	0/0:9,0:9:27.06:0,27,621	0/0:21,0:20:17.83:0,18,999	0/0:23,0:22:39.13:0,39,872	0/0:9,0:9:21.07:0,21,470
chr10	86107838	.	G	GAC	4812.90	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=-10.157;DP=531;FS=14.364;HRun=0;HaplotypeScore=70.9660;InbreedingCoeff=0.8051;MQ=59.20;MQ0=29;MQRankSum=-1.039;QD=26.30;ReadPosRankSum=0.236;VQSLOD=4.9416;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:17.92:0,18,411	0/0:3,0:3:8.97:0,9,71	0/0:17,0:7:14.98:0,15,152	0/0:34,0:13:16.72:0,17,181	0/0:23,0:21:60.15:0,60,839	0/0:25,0:25:72.09:0,72,925	0/0:20,0:19:57.11:0,57,737	1/1:10,27:26:68.38:723,68,0	0/0:19,0:18:51.13:0,51,708	0/1:20,0:19:33.65:182,0,34	0/0:16,0:16:17.72:0,18,84	0/0:10,0:10:30.07:0,30,402	0/0:17,0:17:51.06:0,51,654	0/0:17,0:17:36.19:0,36,635	0/0:18,0:18:51.15:0,51,731	0/0:22,0:22:63.11:0,63,803	0/0:28,0:28:20.91:0,21,76	0/0:11,0:10:20.88:0,21,167	1/1:4,16:18:45:674,45,0	1/1:1,15:15:42.14:804,42,0	1/1:3,19:19:21.01:382,21,0	0/0:1,0:1:3.01:0,3,45	0/1:13,0:13:3.26:3,0,379	0/0:25,0:25:66.21:0,66,968	0/0:9,0:9:27.06:0,27,365	1/1:1,19:21:30.61:896,31,0	1/1:1,23:23:39.13:745,39,0	1/1:0,9:9:21.07:403,21,0
chr10	86107840	.	GAC	G	1442.31	PASS	AB=0.993;AC=14;AF=0.250;AN=56;BaseQRankSum=7.555;DP=524;FS=1.037;HRun=0;HaplotypeScore=78.5232;InbreedingCoeff=0.5963;MQ=59.99;MQ0=31;MQRankSum=-3.501;QD=7.84;ReadPosRankSum=0.206;VQSLOD=2.8110;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:31:56.98:830,57,0	1/1:3,0:3:8.94:68,9,0	0/0:18,0:6:14.65:0,15,118	0/0:35,0:14:20.06:0,20,163	0/0:22,0:20:60.14:0,60,943	0/0:25,0:25:67.67:0,68,1009	0/0:20,0:19:54.11:0,54,830	0/1:32,1:22:65.11:65,0,343	0/0:19,0:18:54:0,54,871	1/1:20,0:19:43.20:271,43,0	1/1:15,0:16:20.73:140,21,0	0/0:10,0:10:30:0,30,405	0/0:17,0:17:50.93:0,51,663	0/0:18,0:18:40.11:0,40,644	0/0:17,0:17:51.14:0,51,849	0/0:21,0:21:63.11:0,63,852	1/1:27,0:27:21.49:209,21,0	0/1:11,0:10:6.42:6,0,82	0/1:20,0:17:24.12:24,0,312	0/0:16,0:15:42.14:0,42,542	0/1:21,0:18:9.58:10,0,201	0/0:1,0:1:3.01:0,3,49	0/0:11,0:11:21.39:0,21,502	0/0:25,0:25:69.18:0,69,1115	0/0:9,0:9:27.06:0,27,388	0/0:22,0:21:43.53:0,44,667	0/0:25,0:24:45.11:0,45,539	0/0:9,0:9:21.06:0,21,252
chr10	86108315	.	T	TTCCC	2943.02	PASS	AB=1.000;AC=45;AF=0.938;AN=48;BaseQRankSum=-3.574;DP=245;FS=0.000;HRun=0;HaplotypeScore=56.9490;InbreedingCoeff=0.0374;MQ=87.42;MQ0=1;MQRankSum=-2.410;QD=13.82;ReadPosRankSum=1.468;VQSLOD=2.5981;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:3:27,3,0	1/1:2,0:2:2.98:22,3,0	0/1:23,0:16:12.82:13,0,14	0/0:25,0:18:1.88:0,2,40	1/1:6,3:10:11.98:190,12,0	1/1:1,7:10:12.04:290,12,0	1/1:11,5:16:12.04:291,12,0	1/1:10,0:10:6.47:52,6,0	1/1:17,3:20:12.04:281,12,0	1/1:5,0:5:3:29,3,0	1/1:1,0:1:2.84:14,3,0	1/1:1,4:5:9.03:218,9,0	1/1:3,4:7:9.03:218,9,0	1/1:5,10:16:18.06:436,18,0	1/1:3,9:12:12.04:292,12,0	1/1:7,4:11:6.02:146,6,0	1/1:6,0:6:1.51:35,2,0	1/1:10,0:10:2.97:20,3,0	1/1:5,0:5:3:26,3,0	./.	./.	1/1:3,4:7:9.50:218,10,0	1/1:8,0:8:3.01:53,3,0	1/1:4,4:8:3.01:73,3,0	1/1:4,3:7:3.01:73,3,0	1/1:4,0:4:2.99:24,3,0	./.	./.
chr10	86109241	.	AG	A	3205.71	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=6.876;DP=244;FS=24.753;HRun=1;HaplotypeScore=30.2357;InbreedingCoeff=0.8735;MQ=53.38;MQ0=7;MQRankSum=-3.947;QD=25.44;ReadPosRankSum=1.672;VQSLOD=1.8903;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,9:12:20.95:213,21,0	1/1:0,6:6:12:145,12,0	0/0:13,0:1:3.01:0,3,30	0/0:8,0:1:2.98:0,3,21	0/0:15,0:13:33:0,33,391	0/0:3,0:3:9.03:0,9,123	0/0:5,0:5:8.92:0,9,79	1/1:0,13:12:35.98:432,36,0	0/0:8,0:8:24.04:0,24,279	1/1:0,8:7:21.05:259,21,0	1/1:1,9:9:26.67:298,27,0	0/0:7,0:7:18.05:0,18,229	0/0:7,0:7:20.97:0,21,229	0/0:9,0:9:24:0,24,272	0/0:8,0:7:18.03:0,18,208	0/0:7,0:7:18.03:0,18,212	1/1:1,19:19:48.07:641,48,0	1/1:6,12:17:39.71:497,40,0	1/1:1,5:5:14.92:143,15,0	1/1:0,5:5:11.96:124,12,0	1/1:1,3:4:3.01:42,3,0	0/0:3,0:3:9.02:0,9,106	0/0:11,0:11:32.98:0,33,369	0/0:5,0:5:12.01:0,12,131	0/0:9,0:9:24.07:0,24,311	1/1:1,7:6:18.05:234,18,0	1/1:0,6:6:9.03:124,9,0	1/1:0,10:10:21.04:271,21,0
chr10	86109257	.	A	AAAT	476.82	PASS	AB=1.000;AC=19;AF=0.500;AN=38;BaseQRankSum=-3.420;DP=175;FS=0.000;HRun=0;HaplotypeScore=43.6157;InbreedingCoeff=0.4935;MQ=53.95;MQ0=2;MQRankSum=0.334;QD=7.57;ReadPosRankSum=-0.748;VQSLOD=1.8773;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:2.51:0,3,7	0/0:4,0:4:9.03:0,9,115	./.	./.	./.	./.	1/1:1,0:1:3.01:46,3,0	0/1:14,0:11:0:0,0,0	./.	0/0:5,0:4:6.01:0,6,67	0/0:7,0:6:3.01:0,3,39	1/1:4,1:5:3.01:57,3,0	1/1:2,2:4:6.02:114,6,0	1/1:2,2:4:3.01:57,3,0	1/1:4,0:4:3.01:39,3,0	1/1:3,0:6:3.01:39,3,0	0/0:19,0:18:27.09:0,27,350	0/0:11,0:14:14.51:0,15,95	0/0:5,0:4:3.01:0,3,39	./.	0/0:3,0:3:0:0,0,0	./.	./.	./.	1/1:5,3:9:6.02:114,6,0	1/1:4,0:6:6.02:78,6,0	0/0:4,0:4:3.01:0,3,39	1/1:8,0:9:5.99:60,6,0
chr10	86109393	.	TAACA	T	1378.24	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.031;DP=462;FS=54.404;HRun=0;HaplotypeScore=79.6813;InbreedingCoeff=0.9511;MQ=84.79;MQ0=1;MQRankSum=-0.731;QD=38.28;ReadPosRankSum=2.438;VQSLOD=1.4171;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,2667	0/0:5,0:5:12.04:0,12,313	0/0:16,0:16:38.72:0,39,895	0/0:18,0:17:35.59:0,36,799	0/0:11,0:11:27.09:0,27,660	0/0:10,0:10:30.09:0,30,730	0/0:18,0:18:48.15:0,48,1203	0/0:26,0:26:69.23:0,69,1754	0/0:11,0:11:30.10:0,30,775	0/0:15,0:15:39.13:0,39,981	0/0:8,0:8:15.05:0,15,346	0/0:12,0:12:33.11:0,33,864	0/0:10,0:10:30.10:0,30,760	0/0:12,0:12:36.12:0,36,943	0/0:14,0:14:36.12:0,36,943	0/0:17,0:17:51.18:0,51,1336	0/0:24,0:23:66.23:0,66,1727	1/1:3,33:36:81.28:1473,81,0	0/0:15,0:15:33.11:0,33,860	0/0:13,0:13:39.07:0,39,938	0/0:25,0:24:69.24:0,69,1808	0/0:18,0:18:48.16:0,48,1165	0/0:12,0:12:30.10:0,30,756	0/0:26,0:26:75.26:0,75,1964	0/0:12,0:12:33.11:0,33,862	0/0:14,0:14:39.13:0,39,997	0/0:18,0:18:54.19:0,54,1388	0/0:11,0:11:30.10:0,30,785
chr10	86109935	.	G	GT	10644.92	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-12.942;DP=637;FS=12.099;HRun=2;HaplotypeScore=58.7794;InbreedingCoeff=0.9999;MQ=84.31;MQ0=0;MQRankSum=-3.359;QD=38.29;ReadPosRankSum=0.783;VQSLOD=4.4943;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1374	1/1:0,12:12:33.11:475,33,0	0/0:15,0:15:39.11:0,39,483	0/0:29,0:29:74.73:0,75,849	0/0:22,0:22:42.13:0,42,515	0/0:18,0:18:42.13:0,42,518	0/0:18,0:18:51.16:0,51,632	1/1:1,30:31:93.24:1278,93,0	0/0:25,0:25:72.19:0,72,864	1/1:1,24:25:72.24:1037,72,0	1/1:0,23:23:66.18:925,66,0	0/0:19,0:19:54.17:0,54,669	0/0:18,0:18:51.13:0,51,615	0/0:16,0:16:39.12:0,39,483	0/0:26,0:26:69.22:0,69,855	0/0:21,0:21:60.17:0,60,730	1/1:1,19:20:48.16:691,48,0	0/0:14,0:14:39.08:0,39,466	1/1:0,26:26:78.25:1102,78,0	1/1:0,19:20:42.14:605,42,0	1/1:1,50:51:99:1901,132,0	0/0:21,0:21:42.07:0,42,474	0/0:21,0:21:48.15:0,48,595	0/0:23,0:23:66.21:0,66,818	0/0:14,0:14:39.11:0,39,464	1/1:2,21:22:60.20:862,60,0	1/1:0,30:29:75.25:1079,75,0	1/1:0,17:17:48.16:690,48,0
chr10	86110116	.	C	CTT	4299.64	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=0.724;DP=450;FS=5.569;HRun=11;HaplotypeScore=61.1175;InbreedingCoeff=0.8996;MQ=62.75;MQ0=16;MQRankSum=-2.763;QD=18.37;ReadPosRankSum=-1.213;VQSLOD=3.3427;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,1:20:24.04:244,24,0	1/1:2,2:4:9.03:115,9,0	0/0:16,0:12:5.79:0,6,44	0/0:5,0:4:5.74:0,6,40	0/0:22,0:23:44.48:0,44,414	0/0:11,0:11:27:0,27,262	0/0:11,0:13:23.70:0,24,265	1/1:13,13:27:11.99:440,12,0	0/0:18,0:17:25.12:0,25,236	1/1:7,14:20:44.46:562,44,0	1/1:5,4:9:18.75:203,19,0	0/0:17,0:17:35.99:0,36,343	0/0:15,0:16:26.30:0,26,306	0/1:11,0:11:0.81:1,0,175	0/0:11,0:10:24.03:0,24,233	0/0:13,0:12:27.01:0,27,261	1/1:6,18:22:47.64:644,48,0	1/1:1,0:10:24.95:86,25,0	1/1:10,3:15:26.38:246,26,0	1/1:9,12:21:41.54:517,42,0	1/1:5,6:10:9.03:130,9,0	0/0:18,0:18:38.65:0,39,352	0/0:16,0:14:26.98:0,27,255	0/0:21,0:18:38.76:0,39,361	0/0:15,0:15:32.88:0,33,301	1/1:13,6:18:32.50:379,33,0	1/1:8,13:22:52.81:602,53,0	1/1:0,3:3:9.03:130,9,0
chr10	86110807	.	A	AAT	1107.26	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=6.896;DP=417;FS=7.809;HRun=0;HaplotypeScore=69.0577;InbreedingCoeff=0.1721;MQ=53.71;MQ0=32;MQRankSum=-4.676;QD=5.32;ReadPosRankSum=1.473;VQSLOD=1.6193;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:24:48:420,48,0	0/1:10,0:10:13.16:13,0,37	0/0:12,0:3:6.02:0,6,76	0/0:12,0:4:5.96:0,6,43	0/0:21,0:21:51.07:0,51,582	0/0:21,0:19:45.09:0,45,531	0/0:14,0:14:13.23:0,13,287	0/1:23,0:22:20.42:20,0,247	0/0:6,0:4:6.02:0,6,81	0/1:13,0:13:4.18:30,0,4	0/1:19,0:17:11.16:11,0,117	0/0:8,0:6:12.03:0,12,148	0/0:6,0:6:15.05:0,15,193	0/0:13,0:12:29.80:0,30,338	0/0:9,0:8:17.79:0,18,203	0/0:8,0:7:12.03:0,12,148	0/0:21,0:18:12.61:0,13,125	1/1:14,12:23:40.13:681,40,0	0/1:16,0:12:16.42:16,0,33	0/1:24,0:22:12.70:13,0,44	0/0:10,0:9:3.64:0,4,22	0/0:4,0:3:6.02:0,6,81	0/0:7,0:7:15.04:0,15,188	0/0:23,0:21:51.10:0,51,637	0/0:14,0:13:35.03:0,35,365	0/1:17,0:15:15.08:15,0,124	0/1:22,0:21:23.68:24,0,149	1/1:10,0:7:4.25:27,4,0
chr10	86110812	.	A	ATTT	4819.54	PASS	AB=0.934;AC=28;AF=0.500;AN=56;BaseQRankSum=4.061;DP=408;FS=3.842;HRun=12;HaplotypeScore=72.7153;InbreedingCoeff=0.6437;MQ=52.70;MQ0=17;MQRankSum=-4.176;QD=17.85;ReadPosRankSum=-2.190;VQSLOD=3.0382;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:23:47.31:346,47,0	1/1:2,1:9:20.10:276,20,0	0/0:8,0:2:6:0,6,56	0/0:11,0:4:2.43:0,2,9	0/0:20,0:21:36.32:0,36,389	0/0:19,0:18:29.93:0,30,326	0/1:8,0:14:6.52:7,0,145	1/1:16,6:23:27.01:355,27,0	0/0:7,0:8:5.92:0,6,67	1/1:7,1:15:34.64:461,35,0	1/1:8,0:18:32.97:417,33,0	0/0:7,0:6:9.01:0,9,101	0/0:7,0:7:14.86:0,15,144	0/0:15,0:13:14.94:0,15,168	0/0:7,0:8:13.46:0,13,150	0/0:8,0:7:9:0,9,101	1/1:8,1:16:7.65:304,8,0	0/1:23,0:21:17.36:85,0,17	1/1:5,9:14:33.51:444,34,0	1/1:9,10:21:49.18:572,49,0	1/1:5,4:8:15.01:240,15,0	0/0:2,0:2:6.02:0,6,67	0/1:8,0:8:4.49:4,0,120	0/0:20,0:19:45.02:0,45,488	0/1:13,0:14:1.97:2,0,164	1/1:8,8:17:2.37:432,2,0	1/1:10,10:22:40.81:587,41,0	1/1:3,8:9:21:288,21,0
chr10	86110813	.	T	TATA	1077.19	PASS	AB=0.974;AC=5;AF=0.089;AN=56;BaseQRankSum=2.958;DP=409;FS=8.165;HRun=0;HaplotypeScore=84.4027;InbreedingCoeff=0.2484;MQ=52.35;MQ0=18;MQRankSum=-0.377;QD=11.58;ReadPosRankSum=6.359;VQSLOD=2.1430;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,20:22:48.16:1053,48,0	0/0:9,0:9:4.09:0,4,121	0/0:8,0:2:6.02:0,6,108	0/0:11,0:4:7.84:0,8,86	0/0:22,0:22:51.17:0,51,887	0/0:19,0:18:45.15:0,45,804	0/0:14,0:14:36.01:0,36,513	0/0:24,0:23:20.21:0,20,525	0/0:9,0:8:6.02:0,6,112	0/0:15,0:15:9.55:0,10,102	0/0:18,0:18:18.33:0,18,226	0/0:7,0:6:12.04:0,12,218	0/0:8,0:7:18.02:0,18,277	0/0:15,0:13:29.64:0,30,529	0/0:9,0:8:18.06:0,18,292	0/0:6,0:5:12.04:0,12,217	0/0:18,0:17:10.88:0,11,284	0/1:22,0:21:10.97:126,0,11	0/0:17,0:14:9.28:0,9,206	0/1:20,0:20:0.60:1,0,241	0/0:9,0:8:5.26:0,5,53	0/0:2,0:2:6.02:0,6,112	0/0:8,0:8:15.52:0,16,274	0/0:22,0:19:51.17:0,51,900	0/0:15,0:15:39.08:0,39,607	0/0:18,0:17:17.90:0,18,312	0/1:22,0:22:6.14:6,0,360	0/0:13,0:9:4.58:0,5,60
chr10	86113416	.	A	AAAAC	1008.54	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.566;DP=552;FS=1.010;HRun=0;HaplotypeScore=85.8833;InbreedingCoeff=0.9629;MQ=60.49;MQ0=0;MQRankSum=0.097;QD=29.66;ReadPosRankSum=-1.520;VQSLOD=2.9937;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,21:34:45.15:1103,45,0	0/0:8,0:8:21.07:0,21,350	0/0:22,0:16:18.04:0,18,262	0/0:19,0:19:38.98:0,39,550	0/0:25,0:25:63.16:0,63,948	0/0:12,0:12:24.05:0,24,348	0/0:9,0:9:21.06:0,21,324	0/0:26,0:25:51.16:0,51,794	0/0:13,0:13:27.07:0,27,422	0/0:28,0:28:57.19:0,57,908	0/0:27,0:28:63.21:0,63,1023	0/0:14,0:14:27.08:0,27,412	0/0:21,0:21:48.15:0,48,743	0/0:11,0:11:24.08:0,24,400	0/0:22,0:22:48.16:0,48,776	0/0:15,0:15:24.08:0,24,395	0/0:36,0:36:77.82:0,78,1203	0/0:23,0:23:48.16:0,48,776	0/0:20,0:20:42.13:0,42,634	0/0:21,0:21:54.18:0,54,885	0/0:14,0:14:24.07:0,24,375	0/0:11,0:11:24.05:0,24,371	0/0:13,0:13:21.07:0,21,350	0/0:13,0:13:24.06:0,24,353	0/0:22,0:21:60.20:0,60,973	0/0:29,0:29:66.20:0,66,1030	0/0:36,0:34:66.17:0,66,1043	0/0:7,0:7:21.07:0,21,350
chr10	86113468	.	T	TA	603.88	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-5.004;DP=470;FS=3.978;HRun=9;HaplotypeScore=48.6685;InbreedingCoeff=0.5864;MQ=73.55;MQ0=0;MQRankSum=0.911;QD=14.73;ReadPosRankSum=1.276;VQSLOD=3.5101;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:71.94:0,72,616	0/0:12,0:12:35.99:0,36,313	0/0:14,0:13:8.74:0,9,145	0/1:10,0:10:8.03:8,0,66	0/0:23,0:23:62.98:0,63,547	0/0:14,0:14:38.99:0,39,339	0/0:9,0:9:23.97:0,24,204	0/0:32,0:32:77.96:0,78,675	0/0:10,0:10:29.99:0,30,260	0/0:20,0:20:52.54:0,53,447	0/0:18,0:18:47.98:0,48,417	0/0:10,0:10:29.99:0,30,260	0/0:20,0:20:53.98:0,54,469	0/0:4,0:4:8.99:0,9,78	0/0:12,0:12:29.99:0,30,260	0/0:11,0:11:32.98:0,33,282	0/0:27,0:27:71.98:0,72,625	1/1:5,25:31:63.17:697,63,0	0/0:18,0:18:50.99:0,51,443	0/0:17,0:18:47.02:0,47,397	0/0:10,0:10:26.99:0,27,234	0/0:4,0:4:9:0,9,78	0/0:15,0:15:38.99:0,39,338	0/0:5,0:5:12:0,12,104	0/0:31,0:31:89.97:0,90,778	0/0:24,0:24:62.96:0,63,542	0/0:25,0:23:65.98:0,66,572	0/0:16,0:16:35.97:0,36,313
chr10	86128852	.	G	GT	420.73	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.696;DP=594;FS=0.000;HRun=0;HaplotypeScore=85.8264;InbreedingCoeff=0.9908;MQ=65.51;MQ0=1;MQRankSum=0.332;QD=17.53;ReadPosRankSum=2.091;VQSLOD=5.9738;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,14:24:46.88:516,47,0	0/0:6,0:6:18.03:0,18,231	0/0:23,0:16:47.95:0,48,578	0/0:26,0:17:40.93:0,41,462	0/0:30,0:29:81.23:0,81,1088	0/0:20,0:19:60.20:0,60,834	0/0:25,0:25:75.21:0,75,1019	0/0:32,0:31:93.31:0,93,1280	0/0:17,0:17:48.16:0,48,669	0/0:19,0:19:56.63:0,57,709	0/0:15,0:15:39.09:0,39,495	0/0:10,0:10:30.10:0,30,419	0/0:16,0:16:45.15:0,45,628	0/0:12,0:12:36.12:0,36,497	0/0:25,0:25:75.23:0,75,1012	0/0:16,0:16:48.15:0,48,650	0/0:47,0:47:99:0,135,1720	0/0:26,0:26:78.23:0,78,1063	0/0:26,0:24:63.13:0,63,795	0/0:29,0:29:72.11:0,72,926	0/0:27,0:27:75.16:0,75,996	0/0:12,0:12:33.10:0,33,442	0/0:14,0:14:42.13:0,42,567	0/0:23,0:23:60.19:0,60,813	0/0:16,0:16:48.16:0,48,670	0/0:24,0:24:69.19:0,69,939	0/0:22,0:22:59.96:0,60,780	0/0:12,0:12:36.09:0,36,482
chr10	86130466	.	T	TA	387.62	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.672;DP=364;FS=3.918;HRun=8;HaplotypeScore=50.7106;InbreedingCoeff=0.5953;MQ=70.87;MQ0=0;MQRankSum=0.397;QD=24.23;ReadPosRankSum=2.195;VQSLOD=4.4419;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:42.12:482,42,0	0/0:1,0:1:3:0,3,27	0/0:8,0:5:5.14:0,5,33	0/0:7,0:6:2.87:0,3,15	0/0:20,0:20:59.99:0,60,532	0/0:28,0:28:77.86:0,78,693	0/0:7,0:7:17.99:0,18,156	0/0:48,0:48:99:0,114,1000	0/0:12,0:12:32.97:0,33,287	0/0:18,0:18:45.01:0,45,407	0/0:17,0:17:48:0,48,428	0/0:4,0:4:12:0,12,106	0/0:7,0:7:18:0,18,161	0/0:5,0:5:14.99:0,15,131	0/0:6,0:6:18:0,18,161	0/0:6,0:6:9:0,9,82	0/0:29,0:29:80.97:0,81,721	0/0:10,0:10:21:0,21,188	0/0:18,0:18:47.98:0,48,428	0/0:13,0:13:32.65:0,33,276	0/0:9,0:9:27.01:0,27,243	0/0:6,0:6:17.99:0,18,156	0/0:6,0:6:17.97:0,18,152	0/0:4,0:4:11.99:0,12,103	0/0:12,0:12:27.01:0,27,247	0/0:16,0:16:42.01:0,42,381	0/0:10,0:10:29.98:0,30,261	0/0:21,0:21:63:0,63,565
chr10	86132607	.	AGAAT	A	6959.67	PASS	AB=0.553;AC=25;AF=0.446;AN=56;BaseQRankSum=14.056;DP=765;FS=1.629;HRun=0;HaplotypeScore=124.4785;InbreedingCoeff=0.8706;MQ=61.86;MQ0=2;MQRankSum=2.080;QD=22.31;ReadPosRankSum=2.070;VQSLOD=4.4884;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,18:29:42.14:672,42,0	1/1:1,4:5:6.02:83,6,0	0/0:27,0:17:3.48:0,3,43	0/0:34,0:23:6.02:0,6,88	0/0:23,0:23:33.11:0,33,723	0/0:24,0:24:36.11:0,36,773	0/0:36,0:36:78.24:0,78,1645	1/1:23,0:22:18.05:256,18,0	0/0:36,0:36:84.29:0,84,1969	1/1:11,17:29:54.14:758,54,0	1/1:8,7:15:12.04:181,12,0	0/0:38,0:38:75.26:0,75,1629	0/0:23,0:23:54.19:0,54,1264	0/0:37,0:37:87.26:0,87,1871	0/0:35,0:35:60.74:0,61,1406	0/0:33,0:33:81.28:0,81,1864	1/1:5,20:25:41.73:634,42,0	1/1:9,14:23:36.12:576,36,0	1/1:19,7:25:20.97:270,21,0	0/1:4,17:21:23.95:621,0,24	1/1:10,31:41:60.20:961,60,0	0/0:23,0:23:54.13:0,54,1155	0/0:24,0:24:45.15:0,45,1002	0/0:43,0:43:90.30:0,90,1977	0/0:17,0:17:24.07:0,24,510	1/1:10,17:27:51.17:796,51,0	1/1:9,23:32:42.14:672,42,0	1/1:2,14:16:30.10:480,30,0
chr10	86133074	.	C	CTATT	557.04	PASS	AC=14;AF=0.636;AN=22;BaseQRankSum=-0.690;DP=256;FS=0.000;HRun=0;HaplotypeScore=47.8876;InbreedingCoeff=0.4398;MQ=78.14;MQ0=3;MQRankSum=-1.434;QD=7.33;ReadPosRankSum=0.903;VQSLOD=1.4071;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:3.01:0,3,44	1/1:5,0:5:3.48:36,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/0:3,0:3:3.01:0,3,44	1/1:8,2:10:6.02:137,6,0	0/0:8,0:8:3.01:0,3,44	./.	1/1:19,0:19:3.01:48,3,0	./.	1/1:9,0:9:3.01:56,3,0	./.	./.	./.	0/0:5,0:6:2.98:0,3,22	./.	1/1:8,3:11:9.03:205,9,0	1/1:7,0:7:6.02:78,6,0	./.	1/1:15,0:15:11.83:96,12,0
chr10	86133255	.	A	AT	6169.54	PASS	AB=0.787;AC=53;AF=0.946;AN=56;BaseQRankSum=-5.458;DP=291;FS=1.183;HRun=8;HaplotypeScore=50.1036;InbreedingCoeff=0.0766;MQ=77.10;MQ0=4;MQRankSum=-3.039;QD=21.20;ReadPosRankSum=3.491;VQSLOD=4.8389;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:57.17:657,57,0	0/1:0,1:1:0:0,0,0	0/1:30,2:19:33.01:33,0,154	0/1:31,3:15:74.72:94,0,75	1/1:0,10:8:24.07:277,24,0	1/1:1,9:10:30.07:336,30,0	1/1:6,4:10:16.87:157,17,0	1/1:10,16:25:66.18:751,66,0	1/1:0,2:2:6.02:69,6,0	1/1:3,6:9:21.02:228,21,0	1/1:1,10:11:27.07:303,27,0	1/1:1,5:6:15.04:173,15,0	1/1:2,1:3:6.01:61,6,0	1/1:2,5:7:15.04:173,15,0	1/1:0,3:2:6.02:69,6,0	1/1:1,2:3:6.02:69,6,0	1/1:3,10:13:33.06:366,33,0	1/1:8,14:21:48.10:539,48,0	1/1:1,11:11:30.09:345,30,0	1/1:2,3:5:11.99:124,12,0	1/1:1,9:10:27.08:312,27,0	1/1:2,2:4:9.02:100,9,0	1/1:1,2:3:9.03:104,9,0	1/1:3,4:6:15.04:173,15,0	1/1:0,5:5:15.04:173,15,0	1/1:0,3:3:9.03:104,9,0	1/1:3,4:7:18.05:207,18,0	1/1:5,4:9:15.04:173,15,0
chr10	86133296	.	AG	A	9900.03	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=-2.419;DP=298;FS=12.240;HRun=1;HaplotypeScore=44.3503;InbreedingCoeff=0.6147;MQ=53.88;MQ0=3;MQRankSum=-0.015;QD=36.13;ReadPosRankSum=0.476;VQSLOD=3.4190;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:66.15:895,66,0	1/1:0,6:6:12.04:168,12,0	./.	0/0:10,2:4:5.13:0,5,40	1/1:1,9:8:21.05:274,21,0	1/1:0,14:14:39.13:543,39,0	1/1:0,11:11:27.09:375,27,0	1/1:1,21:22:63.10:810,63,0	1/1:0,6:6:18.06:252,18,0	1/1:1,11:12:36.11:486,36,0	1/1:0,11:11:27:350,27,0	1/1:0,10:10:30.10:418,30,0	1/1:0,5:5:15.05:209,15,0	1/1:0,8:8:24.08:334,24,0	1/1:0,6:5:15.05:209,15,0	1/1:0,3:3:9.03:125,9,0	1/1:1,16:17:45.13:609,45,0	1/1:0,21:20:57.19:795,57,0	1/1:0,16:15:45.14:612,45,0	1/1:0,10:10:26.73:355,27,0	1/1:1,8:9:21:268,21,0	1/1:0,3:3:9.03:125,9,0	1/1:0,11:11:30.06:397,30,0	1/1:0,6:5:6.02:84,6,0	1/1:0,10:10:30.10:417,30,0	1/1:0,9:9:24.08:335,24,0	1/1:0,9:9:21.07:287,21,0	1/1:0,4:4:12.04:167,12,0
chr10	86137613	.	C	CT	7755.16	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=1.687;DP=520;FS=25.763;HRun=6;HaplotypeScore=73.3059;InbreedingCoeff=0.9008;MQ=65.01;MQ0=4;MQRankSum=-4.974;QD=27.90;ReadPosRankSum=-2.504;VQSLOD=2.5650;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:81.26:1019,81,0	1/1:6,7:13:27.09:338,27,0	0/0:36,0:14:3.94:0,4,144	0/1:26,0:12:7.69:8,0,52	0/0:22,0:22:54.11:0,54,544	0/0:24,0:24:54.11:0,54,550	0/0:9,0:9:24.04:0,24,238	1/1:9,12:21:47.31:543,47,0	0/0:18,0:18:48.09:0,48,485	1/1:5,18:23:57.16:707,57,0	1/1:0,17:17:48.15:588,48,0	0/0:15,0:15:33.07:0,33,336	0/0:19,0:19:45.06:0,45,449	0/0:11,0:11:30.07:0,30,306	0/0:22,0:22:60.12:0,60,605	0/0:13,0:13:33.07:0,33,336	1/1:8,17:25:57.07:678,57,0	1/1:2,9:11:21.27:331,21,0	1/1:1,16:17:48.15:604,48,0	1/1:7,16:23:60.19:751,60,0	1/1:0,3:3:9.03:113,9,0	0/0:7,0:7:21.05:0,21,214	0/0:20,0:20:57.12:0,57,580	0/0:3,0:3:9.02:0,9,92	0/0:23,0:23:63.14:0,63,642	1/1:7,17:24:60.18:738,60,0	1/1:8,18:26:71.61:816,72,0	1/1:2,14:16:42.13:522,42,0
chr10	86137636	.	G	GAA	4148.65	PASS	AB=0.607;AC=23;AF=0.411;AN=56;BaseQRankSum=11.232;DP=580;FS=8.974;HRun=12;HaplotypeScore=108.6785;InbreedingCoeff=0.9169;MQ=60.99;MQ0=9;MQRankSum=-8.590;QD=16.73;ReadPosRankSum=-3.588;VQSLOD=1.3124;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:64.58:0,65,721	1/1:1,7:8:15.05:205,15,0	0/0:45,0:17:12.30:0,12,79	0/0:28,0:10:8.39:0,8,58	0/0:26,0:27:56.88:0,57,564	0/0:21,0:22:35.04:0,35,405	0/0:14,0:14:32.92:0,33,300	1/1:22,1:27:29.53:342,30,0	0/0:21,0:22:47.81:0,48,466	1/1:11,13:27:46.66:566,47,0	1/1:10,4:17:10.84:384,11,0	0/0:14,0:14:32.06:0,32,282	0/0:16,0:19:35.76:0,36,363	0/0:9,0:9:14.96:0,15,139	0/0:19,0:20:41.54:0,42,419	0/0:16,0:16:41.74:0,42,366	1/1:9,12:25:51.13:531,51,0	0/1:6,0:17:1.61:52,0,2	1/1:17,2:17:35.62:271,36,0	1/1:11,0:26:52.60:444,53,0	1/1:4,0:4:6.67:38,7,0	0/0:8,0:8:15:0,15,139	0/0:15,0:16:29.68:0,30,258	0/0:7,0:7:21:0,21,188	0/0:28,0:30:52.46:0,52,498	1/1:23,1:30:67.84:551,68,0	1/1:24,2:29:48.99:411,49,0	1/1:12,1:17:43.04:353,43,0
chr10	86139473	.	GA	G	8620.85	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.334;DP=627;FS=0.000;HRun=2;HaplotypeScore=60.0344;InbreedingCoeff=0.9948;MQ=78.53;MQ0=0;MQRankSum=0.212;QD=34.90;ReadPosRankSum=-0.766;VQSLOD=4.6254;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.30:0,96,1398	1/1:0,5:5:12.04:156,12,0	0/0:14,0:14:32.94:0,33,433	0/0:14,0:14:23.79:0,24,252	0/0:14,0:14:33.10:0,33,471	0/0:26,0:26:78.26:0,78,1168	0/0:36,0:36:99:0,108,1442	1/1:0,41:41:99:1551,123,0	0/0:22,0:22:63.20:0,63,923	1/1:0,18:18:54.15:674,54,0	1/1:1,12:13:36.12:467,36,0	0/0:33,0:33:96.30:0,96,1397	0/0:23,0:23:63.21:0,63,937	0/0:26,0:26:78.24:0,78,1127	0/0:17,0:17:51.17:0,51,764	0/0:24,0:24:69.23:0,69,1014	1/1:0,25:25:63.20:817,63,0	0/0:26,0:26:78.15:0,78,1058	1/1:1,32:33:96.26:1189,96,0	1/1:0,14:14:36.12:462,36,0	1/1:0,42:42:99:1320,102,0	0/0:18,0:18:54.18:0,54,807	0/0:13,0:13:36.12:0,36,538	0/0:30,0:30:87.25:0,87,1249	0/0:12,0:12:33.11:0,33,494	1/1:0,19:19:57.11:703,57,0	1/1:0,28:28:75.24:970,75,0	1/1:0,9:9:24.08:311,24,0
chr10	86139734	.	AG	A	1710.56	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.997;DP=374;FS=6.258;HRun=2;HaplotypeScore=37.6374;InbreedingCoeff=0.9598;MQ=84.68;MQ0=0;MQRankSum=-0.708;QD=33.54;ReadPosRankSum=0.359;VQSLOD=2.9547;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.23:0,72,1059	1/1:0,7:7:21.07:273,21,0	0/0:12,0:12:33.08:0,33,448	0/0:13,0:13:23.70:0,24,283	0/0:8,0:8:24.08:0,24,360	0/0:11,0:11:33.11:0,33,495	0/0:19,0:19:57.15:0,57,811	0/0:15,0:15:45.15:0,45,674	0/0:7,0:7:21.06:0,21,295	1/1:0,15:15:45.15:584,45,0	1/1:0,6:6:18.06:234,18,0	0/0:14,0:14:42.14:0,42,630	0/0:8,0:8:24.08:0,24,360	0/0:11,0:11:33.11:0,33,494	0/0:11,0:11:33.10:0,33,475	0/0:16,0:16:48.16:0,48,720	1/1:0,23:23:60.20:779,60,0	0/0:18,0:18:45.15:0,45,674	0/0:10,0:10:27.09:0,27,405	0/0:11,0:11:33.11:0,33,495	0/0:28,0:28:84.27:0,84,1225	0/0:11,0:11:33.11:0,33,493	0/0:9,0:9:24.08:0,24,360	0/0:23,0:23:66.21:0,66,970	0/0:5,0:5:15.05:0,15,223	0/0:15,0:15:45.15:0,45,673	0/0:21,0:21:63.21:0,63,943	0/0:2,0:2:6.02:0,6,86
chr10	86139807	.	TTATATATATATATATATATATATATATATA	T	145.67	PASS	AC=2;AF=0.167;AN=12;BaseQRankSum=2.404;DP=114;FS=0.000;HRun=0;HaplotypeScore=80.5287;MQ=79.71;MQ0=4;MQRankSum=-1.174;QD=14.57;ReadPosRankSum=0.839;VQSLOD=1.5014;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:1,0:1:3.01:0,3,50	./.	./.	./.	./.	./.	0/0:12,0:12:14.78:0,15,200	./.	./.	./.	./.	./.	0/0:3,0:3:3.01:0,3,50	0/0:5,0:5:3.01:0,3,50	./.	0/0:16,0:15:24.08:0,24,1824	1/1:4,6:10:7.92:219,8,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	86140111	.	CAG	C	710.63	PASS	AB=0.651;AC=3;AF=0.054;AN=56;BaseQRankSum=4.930;DP=486;FS=7.462;HRun=0;HaplotypeScore=106.3851;InbreedingCoeff=0.3484;MQ=65.24;MQ0=0;MQRankSum=-5.737;QD=15.12;ReadPosRankSum=-2.310;VQSLOD=2.7620;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:24.26:0,24,287	0/0:5,0:5:8.83:0,9,54	0/0:28,0:27:81.27:0,81,1427	0/0:28,0:25:72.24:0,72,1332	0/0:16,0:16:42.14:0,42,802	0/0:22,0:22:66.23:0,66,1255	0/0:14,0:14:42.14:0,42,811	0/1:19,22:38:99:763,0,191	0/0:23,0:23:69.24:0,69,1333	0/0:6,0:6:11.90:0,12,87	1/1:2,4:6:3.01:39,3,0	0/0:27,0:27:78.27:0,78,1486	0/0:17,0:17:51.17:0,51,985	0/0:21,0:21:60.21:0,60,1149	0/0:30,0:30:90.29:0,90,1694	0/0:32,0:32:96.33:0,96,1854	0/0:9,0:8:8.83:0,9,54	0/0:10,0:10:20.72:0,21,137	0/0:10,0:9:20.77:0,21,145	0/0:6,0:6:8.66:0,9,54	0/0:16,0:16:8.71:0,9,51	0/0:10,0:10:30.10:0,30,557	0/0:7,0:7:21.07:0,21,400	0/0:31,0:31:93.30:0,93,1762	0/0:10,0:10:30.10:0,30,579	0/0:12,0:12:29.54:0,30,192	0/0:20,0:20:41.22:0,41,255	0/0:3,0:3:5.88:0,6,36
chr10	86140113	.	G	GGTTTGGGTTCTCAGCACCC	23103.39	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-7.192;DP=520;FS=5.830;HRun=0;HaplotypeScore=202.1189;InbreedingCoeff=0.9471;MQ=65.10;MQ0=0;MQRankSum=-11.783;QD=114.94;ReadPosRankSum=-0.353;VQSLOD=4.2420;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:30:36.12:2945,36,0	1/1:0,3:6:9.03:843,9,0	0/0:27,0:25:75.26:0,75,3005	0/0:26,0:24:69.24:0,69,3386	0/0:14,0:14:42.14:0,42,1752	0/0:22,0:22:66.23:0,66,2862	0/0:14,0:14:42.14:0,42,1851	1/1:26,0:26:69.21:4010,69,0	0/0:23,0:23:69.24:0,69,3495	1/1:0,1:14:24.05:1538,24,0	1/1:4,0:4:9.03:745,9,0	0/0:30,0:30:81.26:0,81,3698	0/0:18,0:18:54.14:0,54,2709	0/0:22,0:22:63.19:0,63,2999	0/0:32,0:32:93.28:0,93,4320	0/0:33,0:33:99:0,99,4720	1/1:1,3:14:9.03:843,9,0	1/1:2,3:12:12.04:1125,12,0	1/1:1,2:14:39.13:2337,39,0	1/1:0,3:13:18.02:958,18,0	1/1:3,2:17:9.03:523,9,0	0/0:10,0:10:30.10:0,30,1107	0/0:7,0:7:21.07:0,21,1066	0/0:31,0:31:93.28:0,93,4676	0/0:10,0:10:30.10:0,30,1379	1/1:1,6:17:51.15:3306,51,0	1/1:0,11:23:36.12:3367,36,0	1/1:0,2:10:6.02:563,6,0
chr10	86141290	.	TGCTG	T	853.83	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.401;DP=512;FS=2.053;HRun=0;HaplotypeScore=85.5916;InbreedingCoeff=0.8911;MQ=92.89;MQ0=0;MQRankSum=-3.841;QD=44.94;ReadPosRankSum=2.096;VQSLOD=3.8599;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,3435	0/0:3,0:3:9.03:0,9,246	0/0:22,0:22:60.21:0,60,1569	0/0:23,0:23:63.17:0,63,1489	0/0:18,0:18:48.15:0,48,1221	0/0:16,0:16:45.15:0,45,1232	0/0:20,0:20:60.21:0,60,1607	0/0:32,0:32:87.29:0,87,2233	0/0:15,0:15:45.15:0,45,1196	0/0:25,0:25:66.23:0,66,1735	0/0:10,0:10:30.10:0,30,789	0/0:30,0:30:90.28:0,90,2262	0/0:17,0:17:51.18:0,51,1362	0/0:12,0:12:36.12:0,36,920	0/0:14,0:14:42.13:0,42,1093	0/0:19,0:19:57.18:0,57,1398	0/0:36,0:36:99:0,99,2560	1/1:0,19:19:50.58:949,51,0	0/0:12,0:12:33.11:0,33,904	0/0:8,0:8:21.07:0,21,528	0/0:28,0:28:84.24:0,84,1977	0/0:13,0:13:39.13:0,39,1068	0/0:11,0:11:33.11:0,33,851	0/0:15,0:15:45.11:0,45,1137	0/0:10,0:10:30.10:0,30,821	0/0:18,0:18:54.17:0,54,1411	0/0:17,0:17:51.16:0,51,1301	0/0:4,0:4:9.03:0,9,246
chr10	86142235	.	TGG	T	1690.84	PASS	AB=0.882;AC=9;AF=0.161;AN=56;BaseQRankSum=4.934;DP=521;FS=11.786;HRun=11;HaplotypeScore=70.8219;InbreedingCoeff=0.7798;MQ=79.40;MQ0=1;MQRankSum=0.505;QD=19.00;ReadPosRankSum=4.962;VQSLOD=1.3040;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,1:26:2.91:0,3,106	1/1:2,10:12:27.06:287,27,0	0/0:15,1:16:12.03:0,12,161	0/0:24,0:24:22.33:0,22,400	0/0:12,0:13:14.41:0,14,191	0/0:11,0:12:24.01:0,24,299	0/0:23,0:26:56.16:0,56,793	0/0:13,0:14:11.53:0,12,133	0/0:20,0:20:36.55:0,37,489	1/1:4,23:27:63.13:670,63,0	1/1:0,8:8:18.05:192,18,0	0/0:17,0:17:24.07:0,24,348	0/0:14,0:15:29.57:0,30,388	0/0:10,0:10:18.05:0,18,255	0/0:34,0:35:62.49:0,62,865	0/0:25,0:25:53.71:0,54,692	1/1:3,23:27:57.07:662,57,0	0/0:17,0:18:30.07:0,30,411	0/0:20,0:21:36.92:0,37,570	0/0:8,0:8:5.94:0,6,71	0/0:21,0:23:26.06:0,26,340	0/0:12,0:13:20.56:0,21,286	0/0:15,0:15:21.07:0,21,320	0/0:29,0:32:65.17:0,65,897	0/0:15,0:15:33.10:0,33,481	0/1:13,2:15:42.81:43,0,188	0/0:14,0:15:36.44:0,36,443	0/0:17,0:17:30.05:0,30,413
chr10	86143414	.	TG	T	7201.59	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=9.947;DP=665;FS=3.991;HRun=8;HaplotypeScore=70.5737;InbreedingCoeff=0.9962;MQ=76.59;MQ0=1;MQRankSum=-1.291;QD=24.33;ReadPosRankSum=1.274;VQSLOD=5.7183;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,35:38:99:956,99,0	1/1:1,6:7:15.02:145,15,0	0/0:20,0:20:18.60:0,19,353	0/0:15,0:15:27.03:0,27,289	0/0:13,0:13:36.02:0,36,405	0/0:22,0:21:54.15:0,54,641	0/0:29,0:29:75.21:0,75,893	1/1:1,18:19:45.07:434,45,0	0/0:23,0:23:66.20:0,66,797	1/1:5,19:24:60.07:572,60,0	1/1:1,13:14:32.95:299,33,0	0/0:28,0:28:72.22:0,72,867	0/0:25,0:25:72.19:0,72,836	0/0:24,0:24:69.18:0,69,799	0/0:21,0:21:57.17:0,57,687	0/0:23,0:23:69.17:0,69,817	1/1:7,34:41:99:955,99,0	0/0:4,0:34:80.60:0,81,424	1/1:4,13:17:35.97:335,36,0	1/1:4,11:15:36.05:347,36,0	1/1:3,62:65:99:1680,174,0	0/0:21,0:21:54.16:0,54,638	0/0:11,0:11:24.05:0,24,269	0/0:33,0:33:93.24:0,93,1081	0/0:27,0:27:78.19:0,78,890	1/1:2,20:22:60.09:579,60,0	1/1:1,20:21:60.09:579,60,0	1/1:2,11:13:33.05:319,33,0
chr10	86146390	.	A	AG	3979.35	PASS	AB=0.629;AC=17;AF=0.304;AN=56;BaseQRankSum=-6.235;DP=576;FS=1.713;HRun=9;HaplotypeScore=73.6885;InbreedingCoeff=0.8448;MQ=89.06;MQ0=1;MQRankSum=-0.024;QD=19.32;ReadPosRankSum=-0.338;VQSLOD=3.7718;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,27:36:25.09:720,25,0	0/0:6,0:6:17.98:0,18,152	0/0:33,0:34:52.82:0,53,430	0/0:19,0:19:14.90:0,15,233	0/0:18,0:18:53.89:0,54,449	0/0:13,0:13:27.05:0,27,252	0/0:17,0:17:38.93:0,39,329	1/1:10,14:24:12.63:326,13,0	0/0:17,0:17:44.95:0,45,382	0/0:31,0:31:77.92:0,78,668	0/0:18,0:18:26.73:0,27,215	0/0:26,0:27:65.81:0,66,559	0/0:17,0:17:41.63:0,42,343	0/0:24,0:24:62.02:0,62,527	0/0:20,0:20:50.82:0,51,442	0/0:28,0:28:77.96:0,78,674	0/0:19,0:19:47.94:0,48,409	1/1:8,21:28:34.11:604,34,0	1/1:3,15:18:22.08:470,22,0	1/1:3,7:10:14.99:150,15,0	1/1:6,19:25:45.12:494,45,0	0/0:13,0:13:23.95:0,24,199	0/0:10,0:10:23.97:0,24,204	0/0:13,1:14:2.81:0,3,253	0/0:24,0:24:53.78:0,54,451	0/1:9,13:22:30.46:341,0,30	1/1:7,23:29:60.16:664,60,0	1/1:2,10:12:2.84:209,3,0
chr10	86148232	.	TTTG	T	3086.56	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=13.112;DP=577;FS=3.030;HRun=0;HaplotypeScore=99.4050;InbreedingCoeff=0.9121;MQ=63.39;MQ0=4;MQRankSum=0.954;QD=11.83;ReadPosRankSum=0.230;VQSLOD=3.1517;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:20.18:20,0,304	1/1:14,0:12:20.54:123,21,0	0/0:12,0:8:17.99:0,18,199	0/0:16,0:12:14.58:0,15,200	0/0:26,0:26:74.50:0,74,1140	0/0:19,0:19:51.14:0,51,875	0/0:16,0:16:44.97:0,45,654	1/1:28,2:30:73.63:500,74,0	0/0:8,0:8:23.99:0,24,388	1/1:21,0:21:58.20:381,58,0	1/1:12,1:13:23.55:174,24,0	0/0:14,0:13:38.97:0,39,555	0/0:18,0:18:50.77:0,51,708	0/0:24,0:24:65.93:0,66,1048	0/0:26,0:26:78.10:0,78,1307	0/0:31,0:31:80.85:0,81,1243	1/1:37,1:38:64.50:423,65,0	0/0:25,0:25:75.18:0,75,1263	1/1:29,3:29:70.52:544,71,0	1/1:16,0:15:27.38:170,27,0	1/1:7,0:7:8.83:53,9,0	0/0:9,0:9:21.06:0,21,390	0/0:14,0:14:35.92:0,36,532	0/0:27,0:27:65.88:0,66,1134	0/0:29,0:29:81.15:0,81,1361	1/1:21,0:21:54.77:358,55,0	1/1:26,2:28:54.86:377,55,0	1/1:11,1:12:21.58:185,22,0
chr10	86148233	.	TTG	T	6960.56	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=8.581;DP=576;FS=2.432;HRun=0;HaplotypeScore=75.7003;InbreedingCoeff=0.9120;MQ=61.74;MQ0=4;MQRankSum=1.808;QD=26.77;ReadPosRankSum=-0.240;VQSLOD=5.5056;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:73.77:74,0,130	1/1:3,11:12:21.07:317,21,0	0/0:13,0:8:18:0,18,198	0/0:15,0:10:13.46:0,13,165	0/0:25,0:25:74.69:0,75,947	0/0:19,0:19:51.01:0,51,729	0/0:16,0:16:44.64:0,45,546	1/1:5,25:30:83.90:1017,84,0	0/0:8,0:8:23.86:0,24,316	1/1:0,21:21:60.16:806,60,0	1/1:2,10:12:24.03:320,24,0	0/0:14,0:13:38.84:0,39,491	0/0:18,0:18:50.70:0,51,579	0/0:24,0:24:65.73:0,66,847	0/0:27,0:27:80.95:0,81,1102	0/0:31,0:31:80.57:0,81,1003	1/1:6,32:38:68.33:968,68,0	0/0:25,0:25:74.90:0,75,1043	1/1:18,14:29:80.32:958,80,0	1/1:2,14:15:32.93:439,33,0	1/1:0,7:7:9.03:137,9,0	0/0:10,0:10:24.04:0,24,342	0/0:15,0:15:38.84:0,39,451	0/0:26,0:27:65.58:0,66,907	0/0:29,0:29:81:0,81,1115	1/1:1,20:21:59.68:715,60,0	1/1:3,25:28:57.10:806,57,0	1/1:2,10:12:29.46:403,29,0
chr10	86148234	.	TG	T	4708.14	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=13.642;DP=571;FS=1.534;HRun=1;HaplotypeScore=74.1531;InbreedingCoeff=0.9863;MQ=61.00;MQ0=4;MQRankSum=-0.177;QD=18.54;ReadPosRankSum=-0.429;VQSLOD=4.8944;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,1:29:33.98:245,34,0	1/1:13,0:11:21:183,21,0	0/0:12,0:7:17.98:0,18,173	0/0:16,0:10:14.95:0,15,152	0/0:26,0:26:75.68:0,76,769	0/0:19,0:19:48.89:0,49,554	0/0:17,0:17:32.95:0,33,413	1/1:27,3:30:83.91:740,84,0	0/0:8,0:8:21.87:0,22,238	1/1:21,0:21:59.86:505,60,0	1/1:11,0:11:23.96:204,24,0	0/0:15,0:14:36.79:0,37,387	0/0:19,0:19:50.50:0,50,457	0/0:23,0:23:59.29:0,59,624	0/0:28,0:28:74.56:0,75,855	0/0:29,0:29:71.45:0,71,770	1/1:36,1:37:69.47:584,69,0	0/0:25,0:25:69.39:0,69,797	1/1:27,4:28:78.63:649,79,0	1/1:14,1:14:32.99:306,33,0	1/1:7,0:7:9:79,9,0	0/0:9,0:9:24.03:0,24,265	0/0:17,0:17:38.11:0,38,354	0/0:27,0:27:59.65:0,60,665	0/0:27,0:27:78.60:0,79,852	1/1:20,0:20:57.83:495,58,0	1/1:27,1:28:56.85:489,57,0	1/1:12,0:12:23.12:229,23,0
chr10	86148619	.	AC	A	9754.99	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=17.516;DP=625;FS=6.245;HRun=1;HaplotypeScore=90.2553;InbreedingCoeff=0.9982;MQ=78.11;MQ0=0;MQRankSum=-0.803;QD=39.82;ReadPosRankSum=0.599;VQSLOD=5.1328;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:81.27:1132,81,0	1/1:0,7:7:21.07:294,21,0	0/0:18,0:18:48.16:0,48,730	0/0:15,0:15:22.24:0,22,357	0/0:16,0:16:45.62:0,46,718	0/0:20,0:20:60.19:0,60,935	0/0:34,0:34:99:0,102,1631	1/1:0,17:17:48.15:654,48,0	0/0:28,0:28:84.29:0,84,1335	1/1:0,21:21:63.21:880,63,0	1/1:0,9:9:27.09:373,27,0	0/0:26,0:26:78.27:0,78,1243	0/0:20,0:20:60.20:0,60,958	0/0:27,0:27:81.26:0,81,1270	0/0:37,0:37:99:0,111,1769	0/0:27,0:27:81.24:0,81,1247	1/1:0,30:30:81.27:1133,81,0	0/0:23,0:23:63.21:0,63,996	1/1:0,19:19:54.15:719,54,0	1/1:0,15:15:42.14:587,42,0	1/1:1,56:57:99:2307,166,0	0/0:17,0:17:48.16:0,48,763	0/0:10,0:10:30.10:0,30,480	0/0:38,0:38:99:0,114,1798	0/0:24,0:24:72.21:0,72,1084	1/1:0,19:19:57.19:797,57,0	1/1:0,16:16:42.14:587,42,0	1/1:0,8:8:21.07:294,21,0
chr10	86148646	.	C	CCTCCTG	910.60	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.977;DP=638;FS=2.842;HRun=0;HaplotypeScore=180.0769;InbreedingCoeff=0.9526;MQ=73.25;MQ0=0;MQRankSum=-5.360;QD=45.53;ReadPosRankSum=1.618;VQSLOD=3.8285;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:85.13:0,85,1643	0/0:6,0:6:12.04:0,12,259	0/0:20,0:20:39.08:0,39,772	0/0:13,0:13:27.09:0,27,573	0/0:13,0:13:21.06:0,21,411	0/0:21,0:21:51.16:0,51,1038	0/0:36,0:36:87.30:0,87,1826	0/0:20,0:20:45.15:0,45,947	0/0:28,0:28:63.21:0,63,1318	0/0:25,0:25:69.22:0,69,1382	0/0:12,0:12:24.08:0,24,477	0/0:22,0:22:54.19:0,54,1142	0/0:17,0:17:36.12:0,36,775	0/0:22,0:22:48.16:0,48,1019	0/0:44,0:44:99:0,105,2197	0/0:20,0:20:39.13:0,39,840	0/0:28,0:28:75.26:0,75,1597	1/1:10,10:20:30.10:1005,30,0	0/0:21,0:21:42.13:0,42,823	0/0:12,0:12:18.06:0,18,388	0/0:64,0:64:99:0,154,3236	0/0:18,0:18:42.12:0,42,815	0/0:14,0:14:26.84:0,27,581	0/0:38,0:38:96.33:0,96,2039	0/0:19,0:19:45.15:0,45,954	0/0:24,0:24:48.15:0,48,994	0/0:19,0:18:54.17:0,54,1121	0/0:9,0:9:24.08:0,24,517
chr10	86149593	.	ATT	A	603.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.433;DP=538;FS=0.742;HRun=13;HaplotypeScore=69.4302;InbreedingCoeff=0.8923;MQ=74.16;MQ0=2;MQRankSum=-2.170;QD=15.88;ReadPosRankSum=2.186;VQSLOD=2.7409;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,32:37:72.09:698,72,0	0/0:6,0:7:18.05:0,18,246	0/0:29,0:14:14.25:0,14,199	0/0:21,0:16:9.72:0,10,216	0/0:15,0:17:37.29:0,37,449	0/0:23,0:25:71.70:0,72,963	0/0:19,0:21:57.15:0,57,766	0/0:21,0:22:62.69:0,63,859	0/0:15,0:16:38.60:0,39,510	0/0:14,0:14:18.05:0,18,241	0/0:14,0:16:41.62:0,42,550	0/0:11,0:12:27.07:0,27,357	0/0:21,0:22:56.65:0,57,739	0/0:14,1:17:12.40:0,12,500	0/0:15,0:18:46.60:0,47,548	0/0:24,0:26:59.69:0,60,834	0/0:26,0:27:65.71:0,66,919	0/0:27,0:27:66.14:0,66,930	0/0:17,0:19:48.14:0,48,629	0/0:10,0:11:30.08:0,30,398	0/0:11,0:13:30.10:0,30,419	0/0:10,0:10:27.09:0,27,390	0/0:11,0:11:33.06:0,33,436	0/0:20,0:21:48.12:0,48,661	0/0:12,0:14:26.57:0,27,341	0/0:25,0:25:57.14:0,57,786	0/0:26,0:30:85.72:0,86,1106	0/0:8,0:8:24.05:0,24,304
chr10	86149687	.	ACCCT	A	1053.54	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.980;DP=590;FS=0.000;HRun=0;HaplotypeScore=126.6690;InbreedingCoeff=0.9033;MQ=89.32;MQ0=1;MQRankSum=-7.274;QD=30.99;ReadPosRankSum=1.200;VQSLOD=3.6842;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,30:33:60.20:1148,60,0	0/0:4,0:4:6.02:0,6,164	0/0:22,0:22:63.18:0,63,1571	0/0:25,0:25:75.06:0,75,1801	0/0:15,0:15:42.09:0,42,1001	0/0:26,0:26:75.26:0,75,2039	0/0:25,0:25:75.26:0,75,2015	0/0:22,0:22:66.23:0,66,1807	0/0:22,0:22:63.22:0,63,1724	0/0:15,0:15:42.14:0,42,1085	0/0:17,0:17:45.13:0,45,1058	0/0:23,0:23:69.24:0,69,1890	0/0:25,0:25:75.26:0,75,2036	0/0:26,0:26:75.26:0,75,2042	0/0:30,0:30:87.30:0,87,2344	0/0:17,0:17:48.15:0,48,1244	0/0:29,0:29:78.27:0,78,2127	0/0:28,0:28:78.22:0,78,2051	0/0:31,0:31:90.30:0,90,2354	0/0:22,0:22:63.22:0,63,1625	0/0:28,0:28:81.28:0,81,2211	0/0:9,0:9:27.09:0,27,692	0/0:9,0:9:27.09:0,27,706	0/0:19,0:19:54.17:0,54,1422	0/0:11,0:11:33.10:0,33,831	0/0:24,0:24:69.22:0,69,1777	0/0:20,0:20:54.19:0,54,1475	0/0:12,0:12:36.12:0,36,918
chr10	86149702	.	CG	C	9695.43	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=13.813;DP=598;FS=9.835;HRun=2;HaplotypeScore=68.0899;InbreedingCoeff=0.9852;MQ=85.96;MQ0=0;MQRankSum=-4.322;QD=33.32;ReadPosRankSum=0.637;VQSLOD=4.3343;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:35:78.25:1000,78,0	1/1:0,3:3:6.02:78,6,0	0/0:24,0:24:72.24:0,72,1077	0/0:26,0:26:75.22:0,75,1081	0/0:14,0:14:36.10:0,36,500	0/0:29,0:29:87.29:0,87,1295	0/0:28,0:28:84.27:0,84,1238	1/1:0,27:27:78.25:1010,78,0	0/0:22,0:22:60.19:0,60,879	1/1:0,17:17:45.13:566,45,0	1/1:0,14:14:36.11:457,36,0	0/0:22,0:22:63.20:0,63,916	0/0:21,0:21:60.20:0,60,899	0/0:25,0:25:72.24:0,72,1061	0/0:25,0:25:72.20:0,72,1054	0/0:17,0:17:51.17:0,51,762	1/1:0,31:31:87.28:1129,87,0	1/1:1,29:30:75.24:974,75,0	1/1:1,31:32:93.25:1186,93,0	1/1:0,22:22:54.18:701,54,0	1/1:2,28:30:75.24:973,75,0	0/0:10,0:10:30.09:0,30,429	0/0:15,0:15:39.12:0,39,564	0/0:19,0:19:57.19:0,57,849	0/0:10,0:10:30.08:0,30,407	1/1:1,18:19:54.16:687,54,0	1/1:0,20:20:48.16:623,48,0	1/1:0,11:11:24.08:311,24,0
chr10	86149817	.	T	TAA	2199.61	PASS	AB=0.709;AC=25;AF=0.446;AN=56;BaseQRankSum=-1.580;DP=532;FS=4.523;HRun=15;HaplotypeScore=79.1347;InbreedingCoeff=0.6720;MQ=72.01;MQ0=2;MQRankSum=0.534;QD=7.51;ReadPosRankSum=-2.392;VQSLOD=0.5063;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:16,1:38:18.09:84,0,18	1/1:1,5:6:5.91:38,6,0	0/0:24,0:12:14.65:0,15,85	0/0:12,0:10:11.40:0,11,80	0/0:22,0:22:12.28:0,12,135	0/0:17,0:17:18.12:0,18,144	0/0:10,0:14:7.82:0,8,122	1/1:12,9:23:6.21:234,6,0	0/0:17,0:18:7.38:0,7,141	1/1:6,5:24:37.22:382,37,0	1/1:17,0:17:9.39:74,9,0	0/0:18,0:18:5.35:0,5,150	0/0:18,0:18:23.22:0,23,176	0/1:19,1:21:8.29:8,0,219	0/0:23,0:25:55.86:0,56,411	0/0:11,0:12:26.52:0,27,201	1/1:5,3:28:20.02:160,20,0	1/1:12,0:19:18.03:175,18,0	1/1:16,9:28:26.78:299,27,0	1/1:2,13:16:30.45:326,30,0	1/1:3,6:10:3.26:11,3,0	0/0:7,0:9:5.29:0,5,35	0/0:21,0:23:26.14:0,26,233	0/0:11,0:12:17.84:0,18,139	0/0:9,0:13:20.50:0,21,154	1/1:15,12:33:19.85:361,20,0	0/1:5,10:18:5.60:137,0,6	1/1:5,5:11:9.50:115,9,0
chr10	86150319	.	G	GT	1139.06	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.855;DP=676;FS=5.808;HRun=1;HaplotypeScore=102.0885;InbreedingCoeff=0.9946;MQ=81.67;MQ0=0;MQRankSum=-8.983;QD=32.54;ReadPosRankSum=-3.174;VQSLOD=2.2772;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:35:71.63:1234,72,0	0/0:7,0:7:21.07:0,21,272	0/0:24,0:24:72.22:0,72,908	0/0:14,0:14:36.11:0,36,452	0/0:21,0:21:57.18:0,57,727	0/0:18,0:18:54.16:0,54,687	0/0:28,0:28:84.26:0,84,1075	0/0:27,0:26:69.22:0,69,888	0/0:26,0:26:75.24:0,75,970	0/0:19,0:19:57.19:0,57,740	0/0:12,0:12:33.11:0,33,428	0/0:36,0:36:99:0,108,1360	0/0:25,0:25:75.23:0,75,954	0/0:27,0:27:80.83:0,81,1006	0/0:19,0:19:57.16:0,57,711	0/0:26,0:26:72.21:0,72,907	0/0:30,0:30:87.26:0,87,1110	0/0:28,0:28:84.24:0,84,1072	0/0:25,0:25:72.23:0,72,931	0/0:19,0:19:54.16:0,54,685	0/0:55,0:55:99:0,150,1945	0/0:15,0:15:45.13:0,45,570	0/0:16,0:16:45.13:0,45,569	0/0:45,0:45:99:0,129,1642	0/0:18,0:18:48.16:0,48,622	0/0:29,0:29:84.26:0,84,1065	0/0:23,0:23:69.16:0,69,837	0/0:9,0:9:27.09:0,27,350
chr10	86150325	.	CGGAA	C	1015.62	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.710;DP=666;FS=8.998;HRun=0;HaplotypeScore=141.7443;InbreedingCoeff=0.9906;MQ=83.00;MQ0=0;MQRankSum=-7.746;QD=33.85;ReadPosRankSum=-0.988;VQSLOD=3.0579;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:30:62.42:1110,62,0	0/0:6,0:6:18.01:0,18,380	0/0:24,0:24:66.19:0,66,1592	0/0:15,0:15:42.14:0,42,1074	0/0:20,0:20:60.21:0,60,1628	0/0:19,0:19:57.15:0,57,1497	0/0:28,0:28:84.29:0,84,2351	0/0:30,0:29:84.29:0,84,2296	0/0:24,0:24:69.24:0,69,1930	0/0:18,0:18:48.16:0,48,1331	0/0:11,0:11:33.09:0,33,807	0/0:40,0:40:99:0,117,3238	0/0:21,0:21:63.20:0,63,1673	0/0:27,0:27:81.28:0,81,2247	0/0:20,0:20:60.21:0,60,1651	0/0:22,0:22:66.23:0,66,1791	0/0:34,0:34:99:0,102,2780	0/0:27,0:27:78.27:0,78,2139	0/0:28,0:28:81.28:0,81,2241	0/0:16,0:16:45.15:0,45,1258	0/0:57,0:57:99:0,166,4486	0/0:15,0:15:45.15:0,45,1260	0/0:14,0:14:42.14:0,42,1175	0/0:43,0:43:99:0,126,3483	0/0:18,0:18:51.18:0,51,1393	0/0:28,0:28:84.28:0,84,2242	0/0:22,0:22:66.23:0,66,1811	0/0:9,0:9:27.09:0,27,738
chr10	86151396	.	TG	T	916.12	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.228;DP=553;FS=3.595;HRun=2;HaplotypeScore=69.1006;InbreedingCoeff=0.9916;MQ=57.88;MQ0=9;MQRankSum=1.534;QD=31.59;ReadPosRankSum=0.378;VQSLOD=3.2888;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:78.25:1011,78,0	0/0:11,0:11:33.11:0,33,493	0/0:17,0:11:30.07:0,30,416	0/0:27,0:13:24.63:0,25,370	0/0:17,0:17:45.14:0,45,649	0/0:14,0:13:39.13:0,39,579	0/0:27,0:27:81.27:0,81,1192	0/0:19,0:18:54.18:0,54,807	0/0:16,0:16:48.16:0,48,719	0/0:18,0:18:54.18:0,54,809	0/0:11,0:10:27.09:0,27,404	0/0:12,0:12:36.12:0,36,540	0/0:16,0:16:48.16:0,48,718	0/0:24,0:24:72.23:0,72,1059	0/0:31,0:31:90.29:0,90,1323	0/0:24,0:24:69.22:0,69,1013	0/0:13,0:13:39.11:0,39,563	0/0:22,0:22:66.18:0,66,964	0/0:20,0:19:51.16:0,51,738	0/0:14,0:14:39.12:0,39,561	0/0:38,0:38:99:0,114,1707	0/0:10,0:10:30.10:0,30,449	0/0:9,0:9:24.08:0,24,358	0/0:31,0:31:83.20:0,83,1257	0/0:17,0:17:48.16:0,48,714	0/0:23,0:22:60.19:0,60,881	0/0:33,0:33:96.32:0,96,1434	0/0:8,0:8:24.08:0,24,360
chr10	86152943	.	TAC	T	134.73	PASS	AB=0.950;AC=9;AF=0.188;AN=48;BaseQRankSum=3.317;DP=533;FS=0.976;HRun=0;HaplotypeScore=82.6760;InbreedingCoeff=-0.0194;MQ=65.20;MQ0=11;MQRankSum=0.248;QD=0.82;ReadPosRankSum=0.539;VQSLOD=1.6645;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:35:14.18:69,14,0	0/0:7,0:7:8.85:0,9,78	./.	./.	0/1:23,3:26:35.80:36,0,327	0/0:8,0:8:9.03:0,9,135	0/1:24,1:25:23.91:24,0,81	0/0:16,0:15:5.61:0,6,47	0/0:16,0:16:14.98:0,15,158	0/0:19,0:18:26.80:0,27,251	0/0:14,0:19:3.45:0,3,11	0/1:14,1:15:8.86:9,0,278	0/0:10,0:10:6:0,6,69	0/1:9,0:9:32:32,0,54	0/0:24,0:25:30.95:0,31,552	0/1:19,4:23:68.77:69,0,241	0/0:11,0:12:6.01:0,6,68	0/0:13,0:13:11.94:0,12,103	0/0:8,0:8:11.97:0,12,111	./.	./.	0/1:17,0:17:12.34:12,0,103	0/1:14,0:14:17.71:18,0,118	0/0:41,0:45:56.73:0,57,766	0/0:16,0:15:27.03:0,27,347	0/0:17,0:18:23.99:0,24,252	0/0:12,0:12:13.16:0,13,93	0/0:16,0:16:14.92:0,15,116
chr10	86152975	.	CACACACACAG	C	411.17	PASS	AB=0.545;AC=1;AF=0.018;AN=56;BaseQRankSum=3.880;DP=625;FS=0.000;HRun=0;HaplotypeScore=159.0808;InbreedingCoeff=0.4092;MQ=57.07;MQ0=18;MQRankSum=-2.005;QD=11.42;ReadPosRankSum=-0.274;VQSLOD=2.2976;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:6,30:35:2.10:486,0,2	0/0:9,0:8:18.03:0,18,516	0/0:29,0:15:44.89:0,45,533	0/0:31,0:24:52.06:0,52,566	0/0:24,0:24:66.16:0,66,2310	0/0:20,0:20:48.04:0,48,1113	0/0:20,0:20:50.89:0,51,1258	0/0:22,0:20:60.08:0,60,1022	0/0:22,0:21:39.43:0,39,1228	0/0:20,0:19:57.09:0,57,1430	0/0:21,0:20:27.43:0,27,417	0/0:21,0:21:54.56:0,55,1615	0/0:12,0:12:33.51:0,34,973	0/0:15,0:15:42.09:0,42,1283	0/0:30,0:30:84.22:0,84,3255	0/0:28,0:28:73.40:0,73,2338	0/0:19,0:16:35.91:0,36,646	0/0:15,0:15:40.30:0,40,849	0/0:10,0:8:18.04:0,18,538	0/0:15,0:15:17.99:0,18,203	0/0:44,0:42:3.01:0,3,69	0/0:15,0:15:42.06:0,42,1362	0/0:22,0:22:57.13:0,57,1606	0/0:48,0:48:99:0,114,4278	0/0:19,0:18:51.13:0,51,1953	0/0:22,0:22:63.22:0,63,1859	0/0:26,0:26:26.97:0,27,715	0/0:10,0:10:18.06:0,18,645
chr10	86152983	.	C	CACACACACAG	3634.94	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.596;DP=614;FS=8.150;HRun=0;HaplotypeScore=162.9507;InbreedingCoeff=0.6939;MQ=63.61;MQ0=15;MQRankSum=-2.765;QD=24.07;ReadPosRankSum=-3.405;VQSLOD=1.5355;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:10.79:0,11,223	0/1:10,0:9:72.68:136,0,73	0/0:27,0:16:44.98:0,45,415	0/0:35,0:29:59.22:0,59,607	0/0:24,0:24:62.96:0,63,1058	0/0:20,0:20:53.79:0,54,651	0/0:20,0:20:47.61:0,48,600	1/1:21,0:19:48.68:477,49,0	0/0:19,0:18:31.83:0,32,419	0/1:19,0:18:99:123,0,232	0/0:20,0:20:26.91:0,27,215	0/0:22,0:22:59.20:0,59,979	0/0:13,0:13:32.57:0,33,338	0/0:16,0:16:39.72:0,40,308	0/0:30,0:30:84.52:0,85,1582	0/0:27,0:27:70.67:0,71,1056	0/0:19,0:16:35.80:0,36,288	0/1:14,0:14:99:125,0,152	1/1:12,0:10:23.95:303,24,0	1/1:14,0:14:17.97:150,18,0	0/0:6,31:44:1.55:0,2,4	0/0:12,0:12:30.42:0,30,383	0/0:16,0:16:41.99:0,42,565	0/0:45,0:45:99:0,108,1739	0/0:18,0:18:51.03:0,51,937	1/1:5,0:22:59.90:935,60,0	1/1:5,1:26:21.72:547,22,0	1/1:3,10:13:18.06:840,18,0
chr10	86153241	.	TAAATAA	T	2149.58	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.127;DP=453;FS=50.498;HRun=0;HaplotypeScore=102.7310;InbreedingCoeff=0.8135;MQ=58.94;MQ0=1;MQRankSum=-8.234;QD=28.66;ReadPosRankSum=-0.350;VQSLOD=1.0300;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.19:0,75,2238	1/1:3,5:8:9.03:189,9,0	0/0:12,0:11:5.91:0,6,178	0/0:8,0:5:0:0,0,0	0/0:27,0:27:51.16:0,51,1537	0/0:14,0:14:39.13:0,39,1196	0/0:8,0:8:15.05:0,15,495	0/0:31,0:31:54.19:0,54,1755	0/0:14,0:14:21.96:0,22,697	1/1:4,17:21:45.09:891,45,0	1/1:11,12:22:24.08:469,24,0	0/0:6,0:6:15.05:0,15,496	0/0:12,0:12:24.07:0,24,682	0/0:10,0:10:15.05:0,15,443	0/0:13,0:12:21.07:0,21,604	0/0:18,0:18:30.09:0,30,918	1/1:8,15:23:30.83:754,31,0	0/0:13,0:13:24.08:0,24,756	0/0:28,0:28:60.20:0,60,1764	0/0:21,0:21:34:0,34,1034	0/0:6,0:6:9.03:0,9,298	0/0:5,0:5:3.01:0,3,99	0/0:9,0:9:9.03:0,9,247	0/0:4,0:4:6.02:0,6,199	0/0:17,0:17:48.16:0,48,1583	0/0:26,0:26:72.25:0,72,2319	0/0:26,0:26:51.18:0,51,1676	0/0:22,0:22:51.17:0,51,1494
chr10	86154086	.	A	AAG	10593.71	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-12.981;DP=440;FS=2.185;HRun=0;HaplotypeScore=54.7822;InbreedingCoeff=0.9618;MQ=74.66;MQ0=2;MQRankSum=-1.331;QD=41.54;ReadPosRankSum=3.820;VQSLOD=6.7795;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,40:43:99:1852,103,0	1/1:0,11:11:30.10:492,30,0	0/0:17,0:11:26.93:0,27,280	0/0:14,0:8:11.59:0,12,148	0/0:16,0:16:48.11:0,48,638	0/0:22,0:21:63.17:0,63,884	0/0:8,0:8:24.08:0,24,367	1/1:3,25:30:62.28:1129,62,0	0/0:14,0:14:41.79:0,42,565	1/1:1,17:19:54.07:821,54,0	1/1:3,11:14:30:425,30,0	0/0:13,0:13:39.11:0,39,533	0/0:14,0:14:42.07:0,42,558	0/0:9,0:9:27.05:0,27,350	0/0:19,0:19:57.15:0,57,790	0/0:16,0:16:48.13:0,48,674	1/1:0,22:22:51.17:865,51,0	1/1:1,17:18:48.16:801,48,0	1/1:1,23:24:69.18:1075,69,0	1/1:1,9:13:35.99:523,36,0	1/1:2,3:5:14.52:176,15,0	0/0:1,0:1:3.01:0,3,46	0/0:4,0:4:12.03:0,12,161	0/0:7,0:7:15.05:0,15,229	0/0:11,0:11:33.09:0,33,460	1/1:0,21:21:63.22:1062,63,0	1/1:0,22:24:51.17:864,51,0	1/1:0,11:11:30.10:508,30,0
chr10	86154781	.	AG	A	2099.47	PASS	AB=0.734;AC=8;AF=0.143;AN=56;BaseQRankSum=7.479;DP=603;FS=13.319;HRun=6;HaplotypeScore=68.6886;InbreedingCoeff=0.6814;MQ=82.32;MQ0=0;MQRankSum=-0.838;QD=20.19;ReadPosRankSum=0.387;VQSLOD=2.0841;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.25:0,84,1076	0/1:2,5:7:21.43:143,0,21	0/0:17,0:17:27.14:0,27,410	0/0:26,0:25:60.64:0,61,725	0/0:12,0:12:36.12:0,36,473	0/0:24,0:24:69.21:0,69,892	0/0:35,0:35:93.29:0,93,1208	0/0:24,0:24:66.21:0,66,855	0/0:21,0:21:63.19:0,63,814	1/1:3,27:30:78.16:822,78,0	1/1:1,12:13:36.09:387,36,0	0/0:33,0:33:96.28:0,96,1223	0/0:8,0:8:18.05:0,18,222	0/0:26,0:26:66.21:0,66,868	0/0:22,0:22:57.19:0,57,749	0/0:22,0:22:66.21:0,66,869	1/1:3,28:31:81.20:871,81,0	0/0:23,0:23:69.22:0,69,905	0/0:18,0:18:45.15:0,45,591	0/0:11,0:11:27.06:0,27,337	0/0:36,0:36:99:0,108,1421	0/0:14,0:14:6.02:0,6,398	0/0:14,0:14:42.14:0,42,551	0/0:39,0:39:99:0,108,1393	0/0:6,0:6:15.05:0,15,197	0/1:20,3:23:30.56:31,0,655	0/0:18,0:18:54.15:0,54,693	0/0:18,0:18:54.16:0,54,696
chr10	86155719	.	G	GA	668.21	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.235;DP=534;FS=1.687;HRun=9;HaplotypeScore=57.0570;InbreedingCoeff=0.8822;MQ=78.01;MQ0=0;MQRankSum=-0.813;QD=23.86;ReadPosRankSum=-0.149;VQSLOD=4.3490;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:69.19:763,69,0	0/0:15,0:15:38.99:0,39,338	0/0:13,0:15:27.76:0,28,197	0/0:14,0:16:8.10:0,8,126	0/0:16,0:16:38.99:0,39,339	0/0:20,0:21:56:0,56,471	0/0:12,0:12:29.99:0,30,260	0/0:37,0:37:92.95:0,93,804	0/0:13,0:13:29.97:0,30,260	0/0:37,0:37:92.90:0,93,797	0/0:20,0:20:50.91:0,51,434	0/0:12,0:12:32.98:0,33,286	0/0:5,0:5:11.98:0,12,101	0/0:8,0:8:20.99:0,21,182	0/0:10,0:10:20.99:0,21,182	0/0:12,0:12:29.99:0,30,260	0/0:46,0:46:99:0,126,1066	0/0:21,0:21:62.99:0,63,547	0/0:27,0:28:76.95:0,77,645	0/0:30,0:30:74.97:0,75,651	0/0:20,0:20:41.96:0,42,364	0/0:6,0:6:15:0,15,130	0/0:10,0:10:20.98:0,21,182	0/0:23,0:23:62.98:0,63,547	0/0:16,0:16:47.79:0,48,403	0/0:20,0:20:50.96:0,51,437	0/0:21,1:22:29.81:0,30,488	0/0:14,0:15:34.95:0,35,279
chr10	86156159	.	GTGGTTGGTT	G	6114.96	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.748;DP=635;FS=3.806;HRun=0;HaplotypeScore=200.2588;InbreedingCoeff=0.9925;MQ=89.27;MQ0=0;MQRankSum=-13.866;QD=69.49;ReadPosRankSum=1.135;VQSLOD=4.9323;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,6505	0/0:8,0:8:24.08:0,24,1128	0/0:33,0:33:96.33:0,96,4421	0/0:17,0:17:48.15:0,48,2086	0/0:25,0:25:75.26:0,75,3318	0/0:23,0:23:69.24:0,69,3415	0/0:27,0:27:81.28:0,81,4102	1/1:4,11:15:41.97:995,42,0	0/0:27,0:27:81.28:0,81,3955	0/0:32,0:32:96.33:0,96,4823	0/0:27,0:27:81.28:0,81,4023	0/0:28,0:28:84.29:0,84,4245	0/0:22,0:22:66.21:0,66,3174	0/0:22,0:22:66.23:0,66,3233	0/0:25,0:25:75.26:0,75,3757	0/0:26,0:26:78.27:0,78,3793	0/0:41,0:41:99:0,123,6057	0/0:29,0:29:87.27:0,87,4148	1/1:1,6:7:18.06:484,18,0	1/1:0,15:15:45.15:1097,45,0	1/1:0,12:12:33.08:641,33,0	0/0:28,0:28:84.29:0,84,4136	0/0:21,0:21:63.22:0,63,3083	0/0:25,0:25:75.26:0,75,3487	0/0:14,0:14:42.14:0,42,2101	1/1:0,13:13:39.13:1021,39,0	1/1:0,22:22:66.22:1603,66,0	1/1:0,4:4:12.04:275,12,0
chr10	86156169	.	CTCT	C	2503.06	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.310;DP=638;FS=1.452;HRun=0;HaplotypeScore=131.8836;InbreedingCoeff=0.9875;MQ=93.88;MQ0=0;MQRankSum=-13.368;QD=28.77;ReadPosRankSum=1.114;VQSLOD=4.1105;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,2857	0/0:7,0:7:21.07:0,21,512	0/0:38,0:38:99:0,108,2549	0/0:21,0:22:65.67:0,66,1394	0/0:21,0:21:60.19:0,60,1393	0/0:24,0:24:72.25:0,72,1749	0/0:30,0:30:90.30:0,90,2164	1/1:2,11:13:39.08:463,39,0	0/0:25,0:25:75.26:0,75,1842	0/0:35,0:35:99:0,105,2475	0/0:27,0:27:81.28:0,81,1994	0/0:28,0:28:84.29:0,84,2064	0/0:21,0:21:63.22:0,63,1552	0/0:20,0:20:60.21:0,60,1463	0/0:25,0:25:75.26:0,75,1841	0/0:26,0:26:78.25:0,78,1828	0/0:43,0:43:99:0,117,2758	0/0:27,0:27:78.27:0,78,1891	1/1:0,6:6:18.06:232,18,0	1/1:0,15:15:43.30:469,43,0	1/1:1,12:13:21.69:225,22,0	0/0:28,0:28:84.29:0,84,2070	0/0:21,0:21:63.20:0,63,1498	0/0:24,0:24:69.24:0,69,1699	0/0:16,0:16:48.16:0,48,1183	1/1:1,13:14:42.10:498,42,0	1/1:0,22:22:60.62:698,61,0	1/1:0,4:4:9.50:114,9,0
chr10	86156251	.	AT	A	5804.51	PASS	AB=0.746;AC=26;AF=0.464;AN=56;BaseQRankSum=10.698;DP=606;FS=0.000;HRun=10;HaplotypeScore=68.2685;InbreedingCoeff=0.8621;MQ=63.57;MQ0=0;MQRankSum=-1.570;QD=18.97;ReadPosRankSum=-0.332;VQSLOD=5.4083;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,43:46:99:911,105,0	0/1:2,10:12:3.19:204,0,3	0/0:29,0:23:1.65:0,2,288	0/1:17,1:12:3.53:4,0,154	0/0:20,0:20:48.10:0,48,513	0/0:21,1:22:34.11:0,34,596	0/0:20,0:20:54.15:0,54,597	1/1:4,24:28:71.84:609,72,0	0/0:33,0:33:93.22:0,93,1005	1/1:4,17:21:17.75:373,18,0	1/1:2,9:11:18.79:223,19,0	0/0:15,1:16:16.05:0,16,398	0/0:20,0:21:53.87:0,54,560	0/0:16,0:16:25.19:0,25,430	0/0:19,0:19:54.13:0,54,589	0/0:22,0:22:63.16:0,63,689	1/1:6,23:29:56.97:495,57,0	1/1:1,17:18:14.84:358,15,0	1/1:5,21:26:59.94:517,60,0	1/1:0,24:24:71.99:625,72,0	1/1:1,14:17:14.69:319,15,0	0/0:21,0:21:51.13:0,51,556	0/0:20,1:21:25.06:0,25,490	0/0:25,0:25:69.17:0,69,754	0/0:15,0:15:16.19:0,16,398	1/1:4,17:21:50.97:442,51,0	1/1:5,18:24:52.05:439,52,0	1/1:0,11:11:32.99:286,33,0
chr10	86156493	.	T	TC	3987.14	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.390;DP=644;FS=1.240;HRun=7;HaplotypeScore=70.3306;InbreedingCoeff=0.9933;MQ=79.50;MQ0=0;MQRankSum=-0.226;QD=30.44;ReadPosRankSum=2.074;VQSLOD=4.0479;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,30:34:90.28:1087,90,0	1/1:1,5:6:12.04:145,12,0	0/0:24,0:24:43.35:0,43,447	0/0:21,0:21:25.01:0,25,311	0/0:19,0:19:51.01:0,51,473	0/0:20,0:20:59.57:0,60,554	0/0:26,0:26:60.09:0,60,579	0/0:35,0:35:90.08:0,90,854	0/0:25,0:25:66.07:0,66,625	1/1:3,15:18:42.13:506,42,0	1/1:1,25:26:69.13:814,69,0	0/0:14,0:14:42.05:0,42,399	0/0:24,0:24:63.10:0,63,608	0/0:21,0:21:60.09:0,60,579	0/0:32,0:32:84.13:0,84,811	0/0:27,0:27:81.13:0,81,782	1/1:3,22:25:63.19:761,63,0	1/1:4,18:22:57.15:674,57,0	0/0:17,0:17:36.04:0,36,343	0/0:17,0:17:51.07:0,51,487	0/0:29,0:29:75.04:0,75,704	0/0:19,0:19:48.05:0,48,452	0/0:24,0:24:66.09:0,66,630	0/0:34,0:34:96:0,96,907	0/0:22,0:22:66.11:0,66,637	0/0:27,2:29:35.87:0,36,630	0/0:20,0:20:56.99:0,57,530	0/0:14,0:14:39.06:0,39,376
chr10	86156656	.	T	TGTGTC	8110.94	PASS	AB=0.581;AC=13;AF=0.232;AN=56;BaseQRankSum=1.439;DP=568;FS=19.830;HRun=0;HaplotypeScore=108.3599;InbreedingCoeff=0.8819;MQ=90.47;MQ0=1;MQRankSum=-12.078;QD=64.37;ReadPosRankSum=-2.410;VQSLOD=3.8912;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,114,2340	0/0:14,0:14:39.13:0,39,794	0/0:23,0:23:54.99:0,55,1134	0/0:29,0:29:76.08:0,76,1459	0/0:12,0:12:33.11:0,33,660	0/0:23,0:23:57.15:0,57,1103	0/0:26,0:26:72.25:0,72,1458	1/1:13,13:26:54.18:1450,54,0	0/0:16,0:16:42.14:0,42,871	0/0:20,0:20:60.20:0,60,1203	0/0:8,0:8:24.08:0,24,497	0/0:20,0:20:60.21:0,60,1223	0/0:22,0:22:60.21:0,60,1240	0/0:21,0:21:60.21:0,60,1222	0/0:24,0:24:66.21:0,66,1326	0/0:19,0:19:57.18:0,57,1144	0/0:34,0:34:99:0,99,1974	0/0:29,0:29:75.26:0,75,1530	1/1:7,10:17:45.14:1177,45,0	1/1:2,11:15:36.12:1083,36,0	1/1:8,19:29:59.80:1828,60,0	0/0:12,0:12:36.11:0,36,678	0/0:12,0:12:27.09:0,27,560	0/0:19,0:19:57.20:0,57,1176	0/0:16,0:16:48.16:0,48,994	0/1:5,13:18:14.04:1202,0,14	1/1:1,13:14:39.13:1187,39,0	1/1:1,4:6:6.02:184,6,0
chr10	86158252	.	TTGGCC	T	4162.35	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.894;DP=489;FS=13.973;HRun=0;HaplotypeScore=96.3781;InbreedingCoeff=0.9901;MQ=93.82;MQ0=0;MQRankSum=-6.016;QD=57.02;ReadPosRankSum=1.340;VQSLOD=3.6517;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,169,4987	1/1:0,5:5:15.05:325,15,0	0/0:21,0:21:56.53:0,57,1564	0/0:23,0:23:63.22:0,63,1682	0/0:16,0:16:48.16:0,48,1487	0/0:20,0:20:57.20:0,57,1780	0/0:12,0:12:36.12:0,36,1121	0/0:19,0:19:48.16:0,48,1497	0/0:6,0:6:18.06:0,18,556	1/1:0,18:18:54.19:1167,54,0	1/1:0,13:13:39.13:846,39,0	0/0:19,0:19:57.20:0,57,1801	0/0:13,0:13:39.13:0,39,1138	0/0:13,0:13:39.13:0,39,1202	0/0:19,0:19:57.20:0,57,1792	0/0:16,0:16:45.15:0,45,1383	1/1:2,35:37:84.29:1824,84,0	0/0:15,0:15:45.15:0,45,1428	0/0:9,0:9:24.08:0,24,678	0/0:9,0:9:20.77:0,21,539	0/0:38,0:38:99:0,105,3266	0/0:9,0:9:24.08:0,24,723	0/0:11,0:11:33.11:0,33,1037	0/0:23,0:23:69.24:0,69,2155	0/0:15,0:15:45.15:0,45,1398	0/0:12,0:12:33.11:0,33,1026	0/0:11,0:10:33.11:0,33,1007	0/0:9,0:9:24.08:0,24,741
chr10	86158333	.	A	AC	1228.15	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-6.804;DP=345;FS=2.190;HRun=7;HaplotypeScore=42.4953;InbreedingCoeff=0.8791;MQ=79.87;MQ0=0;MQRankSum=-0.536;QD=14.80;ReadPosRankSum=-0.817;VQSLOD=2.7173;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:57.01:0,57,534	0/0:4,0:4:6:0,6,58	0/0:14,0:12:4.95:0,5,127	0/0:13,0:13:30.79:0,31,297	0/0:9,0:9:15.01:0,15,145	0/0:21,0:21:51.07:0,51,489	0/0:27,0:27:60.05:0,60,567	1/1:5,9:14:24.05:266,24,0	0/0:15,0:15:30.02:0,30,289	0/0:7,0:7:12:0,12,110	0/0:9,0:9:14.95:0,15,144	0/0:19,0:19:35.98:0,36,331	0/0:9,0:9:15.01:0,15,144	0/0:10,0:10:14.61:0,15,128	0/0:7,0:7:15.02:0,15,144	0/0:11,0:11:24.03:0,24,231	0/0:17,0:17:39.05:0,39,376	0/0:10,0:10:12:0,12,116	1/1:5,3:8:9.02:97,9,0	1/1:1,7:8:12.04:142,12,0	1/1:4,22:26:42.13:507,42,0	0/0:5,0:5:12.01:0,12,112	0/0:8,0:8:14.98:0,15,137	0/0:14,0:14:36.06:0,36,347	0/0:6,0:6:12.01:0,12,115	1/1:2,6:8:16.29:184,16,0	1/1:0,10:10:8.91:109,9,0	1/1:4,5:9:9.03:109,9,0
chr10	86159742	.	A	AT	7939.61	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-14.643;DP=707;FS=2.661;HRun=1;HaplotypeScore=65.0623;InbreedingCoeff=0.9999;MQ=92.74;MQ0=0;MQRankSum=-2.113;QD=40.10;ReadPosRankSum=-0.994;VQSLOD=5.0771;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,1519	0/0:11,0:11:33.11:0,33,428	0/0:31,0:31:86.49:0,86,1098	0/0:33,0:33:80.05:0,80,999	0/0:20,0:20:60.20:0,60,779	0/0:21,0:21:63.19:0,63,804	0/0:29,0:29:84.25:0,84,1075	1/1:1,22:23:66.22:988,66,0	0/0:23,0:23:69.21:0,69,879	0/0:19,0:19:57.19:0,57,740	0/0:16,0:16:45.12:0,45,567	0/0:26,0:26:78.25:0,78,1010	0/0:18,0:18:48.16:0,48,623	0/0:22,0:22:66.20:0,66,843	0/0:31,0:31:90.25:0,90,1137	0/0:20,0:20:57.18:0,57,739	0/0:31,0:31:93.30:0,93,1207	0/0:26,0:26:78.21:0,78,975	1/1:1,17:18:51.16:743,51,0	1/1:3,21:24:57.15:829,57,0	1/1:1,57:58:99:2383,160,0	0/0:25,0:25:75.24:0,75,974	0/0:15,0:15:45.13:0,45,569	0/0:36,0:36:99:0,108,1402	0/0:15,0:15:45.15:0,45,584	1/1:1,27:28:45.30:1152,45,0	1/1:0,15:15:42.14:630,42,0	1/1:0,32:32:81.27:1214,81,0
chr10	86163224	.	CT	C	3566.89	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=4.206;DP=484;FS=24.861;HRun=3;HaplotypeScore=66.0524;InbreedingCoeff=0.7818;MQ=66.08;MQ0=5;MQRankSum=-0.567;QD=14.21;ReadPosRankSum=2.354;VQSLOD=1.6931;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,21:26:40.60:474,41,0	1/1:6,0:6:14.99:129,15,0	0/0:29,1:19:2.58:0,3,191	0/0:16,0:5:6.19:0,6,29	0/0:21,0:21:54.04:0,54,657	0/0:9,0:9:10.24:0,10,243	0/0:18,0:18:53.76:0,54,592	1/1:26,2:26:2.35:86,2,0	0/0:12,0:12:24.73:0,25,308	1/1:21,2:23:65.64:570,66,0	1/1:15,0:15:35.85:298,36,0	0/0:12,0:12:31.22:0,31,320	0/0:10,0:10:30.02:0,30,368	0/0:17,0:17:41.92:0,42,450	0/0:16,0:16:42.10:0,42,532	0/0:14,0:14:25.63:0,26,391	1/1:23,1:24:48:419,48,0	1/1:1,32:33:72.19:852,72,0	0/1:16,0:14:21.74:40,0,22	1/1:18,0:18:12.11:138,12,0	0/1:10,0:10:5.58:14,0,6	0/0:8,0:8:22.60:0,23,269	0/0:14,0:14:33.06:0,33,421	0/0:20,0:20:55.82:0,56,669	0/0:15,0:15:38.26:0,38,366	1/1:20,1:21:29.50:242,29,0	1/1:17,1:17:16.95:187,17,0	1/1:12,1:10:8.77:117,9,0
chr10	86163226	.	TTA	T	2746.91	PASS	AB=0.988;AC=17;AF=0.304;AN=56;BaseQRankSum=3.031;DP=492;FS=42.451;HRun=0;HaplotypeScore=74.1275;InbreedingCoeff=0.4100;MQ=67.26;MQ0=5;MQRankSum=0.609;QD=12.05;ReadPosRankSum=3.067;VQSLOD=1.6881;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:26:27.46:84,0,27	1/1:0,7:7:15.05:232,15,0	0/0:29,0:20:19.07:0,19,291	0/0:19,0:6:4.59:0,5,19	0/0:20,0:20:54.08:0,54,896	0/0:10,0:10:26.83:0,27,408	0/0:18,0:18:54.07:0,54,846	0/0:26,0:26:7.97:0,8,253	0/0:13,0:13:32.06:0,32,455	1/1:2,19:23:64.99:849,65,0	1/1:0,14:15:38.82:503,39,0	0/0:12,0:12:33:0,33,439	0/0:10,0:10:30.08:0,30,503	0/0:17,0:17:41.96:0,42,602	0/0:15,0:15:42.10:0,42,714	0/0:15,0:15:36.05:0,36,598	1/1:1,23:24:48.15:727,48,0	1/1:32,1:33:58.20:212,58,0	0/1:14,0:14:9.19:9,0,137	0/1:19,0:20:46.69:47,0,159	0/1:10,0:10:2.53:3,0,69	0/0:8,0:8:24.04:0,24,387	0/0:14,0:14:39.12:0,39,650	0/0:20,0:20:57.10:0,57,910	0/0:16,0:16:45:0,45,553	0/1:20,1:21:77.25:154,0,77	0/1:18,0:18:61.27:61,0,125	0/1:14,0:11:23.21:51,0,23
chr10	86163288	.	T	TC	2514.66	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-7.257;DP=531;FS=2.851;HRun=8;HaplotypeScore=65.8865;InbreedingCoeff=0.9629;MQ=77.52;MQ0=1;MQRankSum=-0.885;QD=20.12;ReadPosRankSum=-1.653;VQSLOD=3.1096;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:39.01:0,39,355	0/0:8,0:8:21.01:0,21,192	0/0:34,0:21:32.98:0,33,294	0/0:33,0:19:34.80:0,35,273	0/0:14,0:14:38.98:0,39,343	0/0:16,0:16:41.75:0,42,363	0/0:22,0:22:57.02:0,57,521	1/1:8,8:15:18:182,18,0	0/0:11,0:11:21:0,21,192	0/0:23,0:23:54.02:0,54,494	0/0:7,0:7:21.01:0,21,192	0/0:23,0:23:57.02:0,57,522	0/0:14,0:14:36.02:0,36,328	0/0:17,0:17:39.01:0,39,356	0/0:18,0:18:44.92:0,45,406	0/0:16,0:16:28.82:0,29,251	0/0:37,0:37:96.01:0,96,869	0/0:31,0:31:72.03:0,72,657	1/1:5,11:16:8.64:353,9,0	1/1:1,10:11:29.07:294,29,0	1/1:2,27:29:57.17:656,57,0	0/0:11,0:11:33.02:0,33,302	0/0:12,0:12:23.98:0,24,215	0/0:21,0:21:48.02:0,48,439	0/0:16,0:16:45.02:0,45,411	1/1:1,16:18:44.94:486,45,0	1/1:1,15:15:36.11:416,36,0	1/1:4,15:19:5.64:319,6,0
chr10	86167448	.	C	CT	2371.86	PASS	AB=0.689;AC=12;AF=0.214;AN=56;BaseQRankSum=-8.708;DP=460;FS=1.450;HRun=10;HaplotypeScore=51.9566;InbreedingCoeff=0.5292;MQ=74.40;MQ0=0;MQRankSum=0.220;QD=17.31;ReadPosRankSum=-1.740;VQSLOD=3.4468;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:79.94:0,80,646	0/0:5,0:5:14.97:0,15,120	0/0:14,2:12:4.98:0,5,46	0/1:9,0:9:3.88:4,0,17	0/0:11,0:12:17.93:0,18,143	0/0:24,0:24:56.90:0,57,465	0/0:12,0:12:29.93:0,30,242	1/1:4,21:25:2.15:595,2,0	0/0:8,0:8:23.96:0,24,195	0/0:15,0:15:32.94:0,33,271	0/0:25,0:25:38.67:0,39,317	0/0:20,0:20:47.91:0,48,394	0/0:9,0:9:23.97:0,24,197	0/0:9,0:9:23.97:0,24,197	0/0:17,0:18:43.94:0,44,345	0/0:17,0:17:41.90:0,42,336	0/0:30,1:33:49.94:0,50,588	0/0:20,0:21:49.91:0,50,391	1/1:8,14:22:5.77:398,6,0	1/1:0,9:9:24.02:240,24,0	0/1:2,7:9:3.59:171,0,4	0/0:3,0:3:8.98:0,9,71	0/0:7,0:7:11.98:0,12,99	0/0:21,0:21:50.57:0,51,399	0/0:15,0:16:34.98:0,35,274	0/1:10,14:24:15.56:378,0,16	0/1:5,18:23:19.79:425,0,20	1/1:4,12:16:30.08:320,30,0
chr10	86167676	.	ATT	A	1150.16	PASS	AB=0.842;AC=9;AF=0.161;AN=56;BaseQRankSum=5.561;DP=535;FS=7.318;HRun=15;HaplotypeScore=69.5621;InbreedingCoeff=0.8657;MQ=72.18;MQ0=1;MQRankSum=0.787;QD=12.11;ReadPosRankSum=4.794;VQSLOD=2.4824;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:62.99:0,63,736	1/1:2,8:10:20.82:184,21,0	0/0:24,0:13:17.35:0,17,148	0/0:14,0:11:14.87:0,15,147	0/0:18,0:23:56.11:0,56,643	0/0:14,0:20:38.03:0,38,418	0/0:15,0:15:36.10:0,36,470	0/0:21,0:23:50.64:0,51,635	0/0:12,0:13:29.73:0,30,324	1/1:3,7:10:17.90:158,18,0	1/1:6,21:27:50.63:484,51,0	0/0:20,0:22:48.84:0,49,562	0/0:15,0:15:39.06:0,39,448	0/0:17,0:19:44.60:0,45,536	0/0:19,0:21:49.37:0,49,569	0/0:17,0:18:50.62:0,51,623	1/1:7,24:31:53.83:476,54,0	0/0:20,0:20:51.13:0,51,659	0/0:20,0:21:37.61:0,38,418	0/0:14,0:16:35.59:0,36,432	0/0:20,1:22:27.65:0,28,584	0/0:15,0:15:29.92:0,30,358	0/0:15,0:17:35.08:0,35,406	0/1:12,2:16:11.26:11,0,402	0/0:24,0:23:57.08:0,57,668	0/0:15,0:19:34.06:0,34,360	0/0:18,0:19:47.61:0,48,584	0/0:12,0:12:30.10:0,30,396
chr10	86168564	.	T	TCAGA	4208.45	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-11.204;DP=775;FS=0.000;HRun=0;HaplotypeScore=129.9778;InbreedingCoeff=0.9985;MQ=65.67;MQ0=0;MQRankSum=-1.888;QD=49.51;ReadPosRankSum=3.673;VQSLOD=4.5472;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,46:52:99:2934,120,0	0/0:14,0:14:24.04:0,24,352	0/0:30,0:27:51.14:0,51,802	0/0:31,0:31:54.12:0,54,829	0/0:23,0:23:60.20:0,60,1003	0/0:26,0:26:54.17:0,54,890	0/0:32,0:32:78.27:0,78,1318	0/0:32,0:32:54.12:0,54,860	0/0:25,0:25:63.18:0,63,1016	0/0:37,0:37:63.21:0,63,1045	0/0:15,0:15:39.13:0,39,662	0/0:40,0:40:96.30:0,96,1576	0/0:26,0:26:63.18:0,63,992	0/0:25,0:25:69.22:0,69,1144	0/0:24,0:23:33.10:0,33,535	0/0:23,0:23:51.17:0,51,862	0/0:28,0:28:72.24:0,72,1197	1/1:10,20:33:51.65:1274,52,0	0/0:29,0:29:51.10:0,51,757	0/0:26,0:26:66.20:0,66,1066	0/0:37,0:37:90.29:0,90,1502	0/0:25,0:25:51.17:0,51,866	0/0:17,0:17:39.12:0,39,632	0/0:25,0:25:66.19:0,66,1059	0/0:23,0:23:54.17:0,54,891	0/0:40,0:40:96.31:0,96,1582	0/0:26,0:26:63.22:0,63,1069	0/0:11,0:11:30.10:0,30,509
chr10	86168821	.	GTGCCTA	G	640.61	PASS	AB=0.679;AC=2;AF=0.036;AN=56;BaseQRankSum=5.007;DP=734;FS=18.020;HRun=0;HaplotypeScore=162.5039;InbreedingCoeff=-0.0371;MQ=72.41;MQ0=0;MQRankSum=-5.696;QD=18.84;ReadPosRankSum=-0.584;VQSLOD=2.2069;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,9:26:99:597,0,351	0/0:10,0:10:30.10:0,30,1099	0/0:23,0:23:60.12:0,60,1808	0/0:21,0:21:57.17:0,57,1755	0/0:17,0:17:51.18:0,51,1866	0/0:25,0:25:69.24:0,69,2458	0/0:36,0:36:99:0,105,3656	0/0:32,0:32:90.23:0,90,2973	0/0:30,0:30:90.31:0,90,3296	0/0:35,0:35:99:0,99,3383	0/0:20,0:20:54.18:0,54,1894	0/0:38,0:38:99:0,114,3978	0/0:31,0:31:93.32:0,93,3405	0/0:27,0:27:78.27:0,78,2721	0/0:37,0:37:99:0,108,3918	0/0:24,0:24:72.25:0,72,2538	0/0:44,0:44:99:0,117,4064	0/1:3,5:8:99:132,0,127	0/0:16,0:16:48.16:0,48,1604	0/0:27,0:27:81.28:0,81,2960	0/0:70,0:70:99:0,190,6718	0/0:21,0:21:63.22:0,63,2247	0/0:9,0:9:27.09:0,27,988	0/0:28,0:28:84.29:0,84,2963	0/0:17,0:17:51.18:0,51,1861	0/0:27,0:27:78.27:0,78,2846	0/0:24,0:24:72.25:0,72,2623	0/0:11,0:11:33.11:0,33,1179
chr10	86168822	.	T	TCACACCCA	2199.89	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.631;DP=739;FS=16.587;HRun=0;HaplotypeScore=191.4727;InbreedingCoeff=0.9909;MQ=72.90;MQ0=0;MQRankSum=-7.512;QD=68.75;ReadPosRankSum=-0.976;VQSLOD=2.4126;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,13:24:57.19:1876,57,0	0/0:10,0:10:30.10:0,30,909	0/0:23,0:23:60.12:0,60,1509	0/0:22,0:22:57.16:0,57,1396	0/0:18,0:18:51.18:0,51,1545	0/0:25,0:25:69.24:0,69,2031	0/0:35,0:35:99:0,105,3030	0/0:31,0:31:90.23:0,90,2404	0/0:30,0:30:90.31:0,90,2709	0/0:35,0:35:99:0,99,2690	0/0:19,0:19:54.18:0,54,1541	0/0:39,0:39:99:0,114,3275	0/0:31,0:31:93.32:0,93,2798	0/0:28,0:28:78.27:0,78,2268	0/0:36,0:36:99:0,108,3234	0/0:24,0:24:72.25:0,72,2073	0/0:45,0:44:99:0,117,3416	1/1:6,2:8:15.05:442,15,0	0/0:17,0:17:48.16:0,48,1371	0/0:28,0:28:81.28:0,81,2452	0/0:73,0:73:99:0,190,5536	0/0:21,0:21:60.19:0,60,1817	0/0:9,0:9:27.09:0,27,818	0/0:29,0:29:84.23:0,84,2363	0/0:18,0:18:51.18:0,51,1545	0/0:26,0:26:78.27:0,78,2324	0/0:24,0:24:72.25:0,72,2159	0/0:11,0:11:33.11:0,33,881
chr10	86168823	.	G	GCCCA	1426.94	PASS	AB=0.783;AC=2;AF=0.036;AN=56;BaseQRankSum=8.191;DP=755;FS=2.672;HRun=0;HaplotypeScore=144.5820;InbreedingCoeff=-0.0242;MQ=73.50;MQ0=0;MQRankSum=-7.427;QD=31.02;ReadPosRankSum=-1.271;VQSLOD=3.5368;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,14:34:29.60:1171,0,30	0/0:10,0:10:30.10:0,30,581	0/0:23,0:23:54.18:0,54,962	0/0:22,0:22:54:0,54,900	0/0:18,0:18:54.14:0,54,1008	0/0:26,0:26:69.21:0,69,1260	0/0:36,0:36:99:0,99,1852	0/0:29,0:29:81.27:0,81,1538	0/0:30,0:30:90.31:0,90,1734	0/0:34,0:34:99:0,99,1807	0/0:18,0:18:51.17:0,51,988	0/0:41,0:41:99:0,111,2073	0/0:31,0:31:93.32:0,93,1803	0/0:29,0:29:75.24:0,75,1421	0/0:37,0:37:99:0,108,2059	0/0:24,0:24:69.22:0,69,1304	0/0:45,0:44:99:0,111,2038	0/1:10,2:11:19.28:345,0,19	0/0:17,0:17:45.15:0,45,865	0/0:28,0:28:81.28:0,81,1553	0/0:73,0:73:99:0,190,3548	0/0:21,0:21:60.12:0,60,1143	0/0:9,0:9:27.09:0,27,514	0/0:29,0:29:87.26:0,87,1595	0/0:18,0:18:54.17:0,54,1015	0/0:26,0:26:78.27:0,78,1507	0/0:24,0:24:72.25:0,72,1382	0/0:11,0:11:33.11:0,33,639
chr10	86168910	.	CTGTGTCTGTGTGTGTGTGTG	C	2772.55	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=4.634;DP=670;FS=5.489;HRun=0;HaplotypeScore=275.8376;InbreedingCoeff=0.8495;MQ=59.11;MQ0=30;MQRankSum=-3.059;QD=11.22;ReadPosRankSum=0.532;VQSLOD=1.9406;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:32.91:265,33,0	1/1:5,0:4:5.99:48,6,0	0/0:33,0:12:13.74:0,14,119	0/0:40,0:17:8.85:0,9,86	0/0:15,0:14:26.96:0,27,376	0/0:22,0:22:36.83:0,37,885	0/0:42,0:40:38.24:0,38,1021	1/1:24,0:23:27.58:257,28,0	0/0:28,0:26:59.86:0,60,1802	1/1:15,0:14:16.22:145,16,0	1/1:0,11:11:0.47:1,0,0	0/0:35,0:34:69.25:0,69,1837	0/0:22,0:22:37.50:0,37,1028	0/0:27,0:27:41.63:0,42,1330	0/0:32,0:29:58.83:0,59,1545	0/0:28,0:28:70.92:0,71,3345	1/1:5,24:27:3.48:166,3,0	1/1:13,0:13:35.77:266,36,0	1/1:20,0:18:45.09:327,45,0	1/1:9,0:7:17.89:137,18,0	1/1:58,0:56:83.80:690,84,0	0/0:21,0:21:29.67:0,30,767	0/0:16,0:16:32.67:0,33,853	0/0:42,0:41:98.84:0,99,3451	0/0:20,0:20:45.39:0,45,1617	0/1:18,0:17:75.91:286,0,76	1/1:13,0:12:23.16:195,23,0	1/1:11,0:10:27.29:203,27,0
chr10	86168914	.	GTC	G	3475.33	PASS	AB=0.955;AC=30;AF=0.556;AN=54;BaseQRankSum=7.673;DP=682;FS=10.354;HRun=0;HaplotypeScore=110.0797;InbreedingCoeff=0.5403;MQ=57.74;MQ0=36;MQRankSum=-1.678;QD=8.93;ReadPosRankSum=-2.583;VQSLOD=1.9794;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:18:32.91:265,33,0	1/1:6,0:5:8.98:72,9,0	0/0:33,0:12:10.30:0,10,115	0/0:36,0:15:9.32:0,9,87	0/0:16,0:14:26.94:0,27,218	0/1:20,1:21:7.47:7,0,172	0/0:43,0:41:21.11:0,21,440	1/1:21,0:20:23.39:276,23,0	0/1:25,0:24:16.51:17,0,271	1/1:15,0:14:22.20:203,22,0	./.	0/1:33,0:32:89.45:89,0,353	0/1:15,6:21:13.34:13,0,183	0/0:30,0:30:35.55:0,36,270	0/0:31,0:28:35.94:0,36,434	0/0:28,0:28:52.57:0,53,564	1/1:28,0:25:4.22:25,4,0	1/1:13,0:13:35.77:267,36,0	1/1:22,0:19:42.89:369,43,0	1/1:10,0:8:20.89:161,21,0	1/1:68,0:66:99:903,108,0	0/1:20,0:20:2.84:3,0,167	0/1:16,0:15:9.57:10,0,225	0/0:43,0:42:33.77:0,34,767	0/0:20,0:20:5.77:0,6,345	1/1:20,0:19:27.93:329,28,0	1/1:17,0:14:36.76:266,37,0	1/1:11,0:10:27.29:202,27,0
chr10	86168916	.	CTG	C	476.16	PASS	AB=0.930;AC=16;AF=0.348;AN=46;BaseQRankSum=1.579;DP=687;FS=8.939;HRun=0;HaplotypeScore=121.2825;InbreedingCoeff=-0.0498;MQ=56.58;MQ0=37;MQRankSum=-0.470;QD=1.31;ReadPosRankSum=3.649;VQSLOD=1.2691;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:22:5.69:0,6,37	0/0:7,0:6:2.99:0,3,23	./.	./.	0/0:18,0:16:2.99:0,3,24	0/1:18,0:20:0.63:20,0,1	0/1:36,0:40:0.13:0,0,30	./.	0/1:24,1:24:44.81:49,0,45	0/0:16,0:15:3.47:0,3,28	./.	0/1:32,4:34:4.14:188,0,4	1/1:20,0:21:5.97:45,6,0	1/1:16,12:30:5.90:48,6,0	0/1:24,0:27:7.14:7,0,39	0/1:28,2:30:38.46:38,0,222	0/1:30,0:27:5.23:5,0,38	0/0:13,0:13:2.92:0,3,17	0/0:22,0:19:0:0,0,0	0/0:11,0:9:0:0,0,0	0/0:67,0:65:3.88:0,4,21	1/1:20,0:20:5.08:20,5,0	0/1:16,0:15:9.24:9,0,69	0/1:38,6:43:99:148,0,225	0/1:19,0:19:20.32:20,0,76	0/0:20,0:19:7.66:0,8,45	0/0:18,0:14:1.21:0,1,3	./.
chr10	86171861	.	TG	T	1862.60	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=7.260;DP=536;FS=7.079;HRun=3;HaplotypeScore=55.9324;InbreedingCoeff=0.8891;MQ=80.76;MQ0=0;MQRankSum=-4.452;QD=25.87;ReadPosRankSum=0.239;VQSLOD=2.2153;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.27:0,81,1211	1/1:1,4:5:15.05:189,15,0	0/0:17,0:18:51.06:0,51,654	0/1:15,0:15:3.12:3,0,336	0/0:11,0:11:30.10:0,30,449	0/0:21,0:21:63.21:0,63,940	0/0:20,0:20:60.20:0,60,899	0/0:24,0:24:69.22:0,69,999	0/0:26,0:26:78.26:0,78,1165	1/1:0,14:14:42.14:543,42,0	1/1:0,5:5:15.05:195,15,0	0/0:27,0:27:81.27:0,81,1212	0/0:25,0:25:75.25:0,75,1124	0/0:27,0:27:81.27:0,81,1200	0/0:13,0:13:36.12:0,36,540	0/0:13,0:13:39.13:0,39,583	1/1:0,33:33:84.27:1091,84,0	0/0:22,0:22:60.18:0,60,875	0/0:10,0:10:30.10:0,30,447	0/0:6,0:6:15.05:0,15,225	0/0:70,0:70:99:0,208,3079	0/0:7,0:7:18.06:0,18,269	0/0:6,0:6:18.05:0,18,252	0/0:34,0:34:99:0,102,1504	0/0:13,0:13:39.13:0,39,585	0/0:22,1:23:27.24:0,27,855	0/0:11,0:11:33.11:0,33,493	0/0:6,0:6:18.06:0,18,270
chr10	86172649	.	GT	G	2886.83	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.398;DP=839;FS=2.535;HRun=2;HaplotypeScore=79.3901;InbreedingCoeff=0.9997;MQ=86.85;MQ0=0;MQRankSum=-0.999;QD=33.18;ReadPosRankSum=2.455;VQSLOD=3.9157;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,171,2464	1/1:1,9:10:27.09:350,27,0	0/0:29,0:29:81.24:0,81,1118	0/0:30,0:30:80.90:0,81,1073	0/0:27,0:27:78.25:0,78,1147	0/0:23,0:23:69.23:0,69,1034	0/0:30,0:30:90.29:0,90,1324	0/0:29,0:29:81.27:0,81,1196	0/0:29,0:29:78.25:0,78,1146	1/1:1,25:26:75.22:945,75,0	1/1:0,14:14:42.14:545,42,0	0/0:40,0:40:99:0,117,1731	0/0:25,0:25:72.23:0,72,1059	0/0:32,0:32:96.28:0,96,1390	0/0:44,0:44:99:0,126,1862	0/0:35,0:35:99:0,105,1572	1/1:1,36:37:93.30:1207,93,0	0/0:33,0:33:99:0,99,1461	0/0:40,0:40:99:0,114,1590	0/0:24,0:24:69.23:0,69,1015	0/0:51,0:51:99:0,144,2072	0/0:29,0:29:81.25:0,81,1175	0/0:30,0:30:90.27:0,90,1289	0/0:26,0:26:78.23:0,78,1125	0/0:23,0:23:69.22:0,69,1014	0/0:25,1:26:39.29:0,39,1013	0/0:21,0:21:63.19:0,63,901	0/0:19,0:19:57.19:0,57,854
chr10	86173131	.	TG	T	2509.33	PASS	AB=0.926;AC=26;AF=0.464;AN=56;BaseQRankSum=8.278;DP=578;FS=5.179;HRun=11;HaplotypeScore=93.4172;InbreedingCoeff=0.3732;MQ=70.66;MQ0=0;MQRankSum=-1.414;QD=6.47;ReadPosRankSum=4.837;VQSLOD=1.9962;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:21,17:38:45.75:369,46,0	0/0:9,0:9:17.78:0,18,123	0/0:15,0:15:16.42:0,16,171	0/0:11,0:11:3.31:0,3,163	0/1:11,0:11:15.26:15,0,18	0/1:22,2:24:7.21:7,0,325	0/1:23,3:26:22.22:22,0,197	1/1:12,6:18:17.43:144,17,0	0/0:25,1:26:27.03:0,27,265	0/0:18,0:20:8.80:0,9,65	0/0:10,0:10:2.87:0,3,18	0/1:18,2:20:0.50:0,0,186	0/1:19,1:20:3.13:3,0,164	0/1:11,1:12:6.62:7,0,130	0/1:28,3:31:22.92:23,0,342	0/0:12,0:12:24.04:0,24,247	0/0:22,0:30:5.84:0,6,39	1/1:11,17:30:54.98:425,55,0	1/1:8,6:16:24.55:170,25,0	1/1:6,2:8:5.64:49,6,0	1/1:39,22:65:69.44:640,69,0	0/1:14,2:16:28.29:28,0,113	0/0:18,1:19:5.29:0,5,217	0/0:18,2:20:11.45:0,11,327	0/0:16,2:18:2.40:0,2,196	1/1:9,8:17:32.60:269,33,0	1/1:9,15:26:48.99:381,49,0	1/1:6,4:10:17.95:145,18,0
chr10	86173448	.	CGT	C	530.85	PASS	AB=0.925;AC=28;AF=0.583;AN=48;BaseQRankSum=7.740;DP=629;FS=6.648;HRun=0;HaplotypeScore=88.2753;InbreedingCoeff=-0.1052;MQ=67.65;MQ0=8;MQRankSum=-2.041;QD=1.18;ReadPosRankSum=3.249;VQSLOD=0.9633;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:15.04:0,15,197	1/1:3,0:8:11.36:56,11,0	./.	./.	0/1:18,1:19:23.23:23,0,57	0/1:13,1:14:20.21:20,0,107	0/1:25,3:29:60.57:61,0,115	0/1:29,0:29:0:0,0,0	0/1:18,2:20:20.23:20,0,99	1/1:25,0:31:5.68:28,6,0	./.	0/1:30,2:31:11.11:11,0,220	0/1:20,1:21:26.20:26,0,37	0/1:19,3:22:20.21:20,0,98	0/1:21,1:22:17.18:17,0,159	0/1:24,3:27:66.61:67,0,254	1/1:19,0:25:17:83,17,0	0/1:22,3:25:75.67:76,0,154	1/1:19,0:20:2.84:14,3,0	1/1:9,0:10:2.84:14,3,0	1/1:43,0:43:0.94:1,1,0	0/0:16,0:16:0.92:0,1,139	0/0:17,0:16:12.01:0,12,136	0/0:39,0:39:27.06:0,27,356	0/1:9,1:10:20.19:20,0,98	1/1:13,0:19:11.12:52,11,0	1/1:15,0:22:14.20:70,14,0	./.
chr10	86175032	.	C	CTCCTTCCTTCCT	6648.03	PASS	AB=0.684;AC=25;AF=0.446;AN=56;BaseQRankSum=7.594;DP=676;FS=2.059;HRun=0;HaplotypeScore=227.6240;InbreedingCoeff=0.8767;MQ=64.69;MQ0=1;MQRankSum=-8.649;QD=20.78;ReadPosRankSum=-4.361;VQSLOD=3.2216;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,18:52:56.59:242,0,57	1/1:9,0:8:12.03:156,12,0	0/0:22,0:15:2.74:0,3,12	0/0:23,0:21:6.01:0,6,101	0/0:18,0:18:21.05:0,21,553	0/0:19,0:19:35.32:0,35,1042	0/0:34,0:34:54.10:0,54,1347	1/1:38,0:38:27.09:638,27,0	0/0:28,0:28:36.12:0,36,1193	1/1:21,0:20:30.09:527,30,0	1/1:15,0:15:27.09:648,27,0	0/0:32,0:32:69.11:0,69,1941	0/0:21,0:21:30.09:0,30,868	0/0:17,0:17:30.09:0,30,934	0/0:35,0:35:33.10:0,33,957	0/0:19,0:19:42.13:0,42,1272	1/1:27,0:27:39.09:861,39,0	1/1:23,0:23:30.05:560,30,0	1/1:17,0:17:21.07:457,21,0	1/1:14,0:15:18.06:462,18,0	1/1:33,0:34:17.71:280,18,0	0/0:13,0:13:21.07:0,21,610	0/0:20,0:20:36.10:0,36,1036	0/0:32,0:32:12.36:0,12,1819	0/0:23,0:22:39.13:0,39,1337	1/1:20,0:22:30.05:568,30,0	1/1:27,0:27:42.09:867,42,0	1/1:19,0:16:29.57:382,30,0
chr10	86175069	.	T	TC	2032.02	PASS	AB=0.801;AC=13;AF=0.232;AN=56;BaseQRankSum=11.866;DP=600;FS=14.273;HRun=1;HaplotypeScore=89.7274;InbreedingCoeff=-0.1112;MQ=54.06;MQ0=6;MQRankSum=-9.567;QD=8.57;ReadPosRankSum=-2.170;VQSLOD=-0.5373;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:34:45.21:0,45,514	0/1:4,3:6:20.78:150,0,21	0/0:19,0:8:24.05:0,24,281	0/0:13,0:4:11.69:0,12,114	0/0:22,0:22:48.13:0,48,593	0/0:21,0:21:49.53:0,50,765	0/0:30,0:30:90.28:0,90,1152	0/1:25,0:23:90.03:90,0,484	0/0:23,0:23:69.22:0,69,894	0/1:13,5:18:28.95:373,0,29	0/1:2,7:15:24.63:140,0,25	0/0:27,0:27:81.24:0,81,1024	0/0:18,0:18:54.15:0,54,673	0/0:21,0:21:63.18:0,63,790	0/0:17,0:17:51.15:0,51,648	0/0:19,0:19:54.16:0,54,676	1/1:15,10:25:12.45:468,12,0	0/1:20,3:23:74.03:74,0,343	0/1:14,4:17:99:117,0,379	0/1:17,3:20:63.42:63,0,455	0/1:18,8:26:99:117,0,294	0/0:17,0:17:42.12:0,42,519	0/0:22,0:22:60.55:0,61,751	0/0:32,0:31:50.58:0,51,1047	0/0:28,0:27:78.25:0,78,1012	0/1:13,4:16:99:188,0,193	0/1:19,8:27:99:314,0,451	0/1:10,5:12:97.24:97,0,165
chr10	86175070	.	CTTT	C	1930.23	PASS	AB=0.894;AC=13;AF=0.232;AN=56;BaseQRankSum=14.353;DP=596;FS=9.802;HRun=3;HaplotypeScore=110.4820;InbreedingCoeff=-0.1862;MQ=54.30;MQ0=6;MQRankSum=-11.903;QD=8.21;ReadPosRankSum=0.828;VQSLOD=-0.5887;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:6.55:0,7,733	0/1:6,1:6:41.56:100,0,42	0/0:19,0:8:23.97:0,24,427	0/0:13,0:4:9.02:0,9,167	0/0:21,0:21:50.85:0,51,1065	0/0:21,0:21:63.18:0,63,1395	0/0:31,0:31:93.29:0,93,1988	0/1:20,4:22:99:143,0,837	0/0:23,0:23:69.24:0,69,1572	0/1:11,7:17:94.97:400,0,95	0/1:14,1:15:55.70:110,0,56	0/0:27,0:27:81.26:0,81,1814	0/0:19,0:19:57.17:0,57,1195	0/0:21,0:21:63.21:0,63,1354	0/0:17,0:17:51.16:0,51,1158	0/0:19,0:19:57.17:0,57,1221	1/1:18,6:24:0.90:570,1,0	0/1:19,3:22:99:133,0,559	0/1:18,0:17:27.13:27,0,690	0/1:17,3:20:99:102,0,756	0/1:22,2:24:69.13:69,0,477	0/0:17,0:17:42.14:0,42,930	0/0:22,0:22:60.65:0,61,1290	0/0:31,1:31:86.78:0,87,1954	0/0:27,0:26:78.27:0,78,1825	0/1:18,1:18:99:145,0,444	0/1:25,4:29:99:237,0,870	0/1:14,1:12:46.07:46,0,372
chr10	86175080	.	TC	T	1284.47	PASS	AB=0.772;AC=12;AF=0.214;AN=56;BaseQRankSum=13.744;DP=583;FS=9.415;HRun=3;HaplotypeScore=89.7551;InbreedingCoeff=-0.0793;MQ=54.24;MQ0=9;MQRankSum=-12.416;QD=5.97;ReadPosRankSum=-0.950;VQSLOD=-0.4321;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:31:36.23:0,36,540	0/1:2,5:6:24.94:154,0,25	0/0:24,0:8:20.95:0,21,235	0/0:15,0:2:3.48:0,3,44	0/0:20,0:20:47.94:0,48,686	0/0:21,0:21:63.21:0,63,905	0/0:25,0:25:69.23:0,69,993	0/0:16,1:15:13.51:0,14,392	0/0:27,0:27:78.26:0,78,1118	0/1:4,14:17:38.36:404,0,38	0/1:7,8:15:15.52:145,0,16	0/0:24,0:24:72.16:0,72,974	0/0:18,0:18:54.18:0,54,776	0/0:20,0:20:60.20:0,60,862	0/0:17,0:17:48.16:0,48,688	0/0:17,0:17:48.16:0,48,683	1/1:7,15:22:5.78:371,6,0	0/1:18,9:27:7.52:8,0,554	0/1:15,0:14:0:0,0,370	0/1:18,3:21:18.02:18,0,574	0/1:21,3:24:35.40:35,0,454	0/0:18,0:18:45.15:0,45,648	0/0:20,0:20:54.18:0,54,775	0/0:27,0:27:78.25:0,78,1122	0/0:27,0:26:78.26:0,78,1123	0/1:15,4:18:87.26:87,0,470	0/1:30,4:34:99:160,0,772	0/1:7,6:10:47.34:47,0,233
chr10	86175778	.	GT	G	1782.71	PASS	AB=0.870;AC=17;AF=0.304;AN=56;BaseQRankSum=5.487;DP=516;FS=1.371;HRun=13;HaplotypeScore=78.9028;InbreedingCoeff=0.6826;MQ=72.87;MQ0=0;MQRankSum=-0.710;QD=9.00;ReadPosRankSum=1.825;VQSLOD=3.1560;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,5:35:4.98:407,5,0	0/0:9,0:9:17.88:0,18,150	0/0:34,0:22:14.43:0,14,113	0/1:19,1:14:6.38:6,0,87	0/0:21,0:21:45.94:0,46,431	0/0:10,0:10:30.05:0,30,292	0/0:26,0:27:56.92:0,57,534	1/1:22,7:30:5.22:271,5,0	0/0:24,0:24:59.89:0,60,555	0/0:19,0:19:24.92:0,25,310	0/0:17,0:18:32.05:0,32,267	0/0:16,0:17:35.67:0,36,323	0/0:15,0:15:36.04:0,36,342	0/0:9,0:10:6.04:0,6,119	0/0:15,0:15:36.05:0,36,345	0/0:21,0:21:48.06:0,48,458	0/0:20,0:21:36.71:0,37,279	1/1:8,5:12:29.83:218,30,0	0/1:18,3:21:2.47:133,0,2	1/1:13,4:16:38.72:284,39,0	1/1:15,2:17:4.38:120,4,0	0/0:5,0:5:12.02:0,12,117	0/0:8,0:8:15.01:0,15,140	0/0:22,1:23:26.12:0,26,397	0/0:18,1:20:4.67:0,5,344	1/1:12,1:13:17.53:115,18,0	0/1:13,5:18:13.07:208,0,13	1/1:8,4:12:29.31:206,29,0
chr10	86175790	.	T	TC	604.06	PASS	AB=0.912;AC=15;AF=0.268;AN=56;BaseQRankSum=8.947;DP=520;FS=2.033;HRun=0;HaplotypeScore=81.2739;InbreedingCoeff=-0.1598;MQ=64.58;MQ0=8;MQRankSum=-4.194;QD=2.17;ReadPosRankSum=4.694;VQSLOD=1.4512;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,9:39:71.49:181,0,71	0/1:7,0:7:11.88:12,0,64	0/0:27,0:12:13.34:0,13,151	0/1:21,0:12:35.60:36,0,132	0/0:21,0:21:57.75:0,58,680	0/0:14,0:13:39.10:0,39,491	0/0:25,0:24:68.59:0,69,789	0/1:29,7:35:67.41:67,0,124	0/0:24,0:24:68.73:0,69,846	0/1:19,1:20:71.90:72,0,245	0/1:15,0:15:4.01:4,0,117	0/0:17,0:16:36.05:0,36,466	0/0:16,0:16:41.94:0,42,511	0/0:10,0:10:22.44:0,22,232	0/0:14,0:14:39.11:0,39,508	0/0:17,0:17:51.14:0,51,643	0/1:19,0:20:27.20:27,0,121	1/1:12,2:13:11:90,11,0	0/1:17,1:17:2.28:2,0,95	0/1:14,3:16:14.96:78,0,15	0/1:9,4:13:24.80:34,0,25	0/0:7,0:7:18.01:0,18,211	0/0:9,0:9:23.90:0,24,257	0/0:23,0:23:62.68:0,63,678	0/0:18,0:18:49.22:0,49,568	0/1:11,3:14:16.60:41,0,17	0/1:17,2:19:55.97:82,0,56	0/1:22,0:22:35.45:35,0,39
chr10	86175794	.	C	CT	3863.83	PASS	AB=0.944;AC=26;AF=0.464;AN=56;BaseQRankSum=9.033;DP=510;FS=11.756;HRun=9;HaplotypeScore=71.5412;InbreedingCoeff=0.8629;MQ=61.69;MQ0=8;MQRankSum=-5.551;QD=14.15;ReadPosRankSum=-1.025;VQSLOD=2.1685;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,12:37:74:741,74,0	1/1:1,0:7:14.23:74,14,0	0/0:22,0:9:6.88:0,7,53	0/1:20,0:11:12.01:12,0,40	0/0:21,0:21:39.77:0,40,379	0/0:14,0:13:32.98:0,33,286	0/0:25,0:24:47.80:0,48,410	1/1:22,12:34:19.56:455,20,0	0/0:23,0:23:50.72:0,51,437	1/1:4,2:19:42.70:263,43,0	1/1:0,1:15:33.42:200,33,0	0/0:18,0:17:22.13:0,22,249	0/0:16,0:16:29.93:0,30,254	0/0:10,0:10:16.69:0,17,154	0/0:14,0:14:29.98:0,30,260	0/0:17,0:17:32.95:0,33,286	1/1:7,2:23:28.37:155,28,0	1/1:12,2:13:21.06:232,21,0	1/1:13,5:17:24.06:257,24,0	0/1:14,2:15:1.98:208,0,2	1/1:12,2:14:21.53:230,22,0	0/0:9,0:9:20.99:0,21,182	0/0:10,0:10:23.64:0,24,204	0/0:21,0:21:47.67:0,48,414	0/0:17,0:17:37.75:0,38,298	1/1:6,7:13:17.06:292,17,0	1/1:17,1:18:11.97:312,12,0	1/1:17,4:21:39.11:431,39,0
chr10	86176032	.	C	CT	777.22	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.090;DP=463;FS=1.371;HRun=11;HaplotypeScore=57.3680;InbreedingCoeff=0.8955;MQ=75.06;MQ0=0;MQRankSum=-0.245;QD=13.40;ReadPosRankSum=0.102;VQSLOD=3.5288;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,28:35:22.66:593,23,0	0/0:7,0:7:17.93:0,18,139	0/0:26,0:20:26.26:0,26,229	0/0:14,0:9:12.20:0,12,82	0/0:20,0:21:46.80:0,47,352	0/0:20,0:20:56.76:0,57,438	0/0:13,0:13:24.95:0,25,206	0/0:33,0:33:52.42:0,52,552	0/0:11,0:11:15.48:0,15,133	0/0:16,1:17:35.78:0,36,274	0/0:9,0:11:25.94:0,26,191	0/0:16,0:15:38.85:0,39,302	0/0:11,0:11:20.91:0,21,162	0/0:6,0:6:17.93:0,18,139	0/0:14,0:14:9.03:0,9,208	0/0:11,0:11:29.88:0,30,232	0/0:28,0:28:74.61:0,75,571	1/1:9,14:23:30.06:305,30,0	0/0:16,0:17:37.89:0,38,284	0/0:12,0:12:32.87:0,33,255	0/0:16,0:16:23.87:0,24,186	0/0:5,0:5:8.96:0,9,70	0/0:15,0:15:29.85:0,30,229	0/0:7,0:7:16.98:0,17,122	0/0:16,1:17:14.39:0,14,294	0/0:21,0:22:55.82:0,56,424	0/0:19,0:19:44.79:0,45,348	0/0:15,0:16:41.81:0,42,325
chr10	86177996	.	C	CGTT	2931.31	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.337;DP=411;FS=0.000;HRun=0;HaplotypeScore=57.8519;InbreedingCoeff=0.8987;MQ=97.31;MQ0=0;MQRankSum=-4.120;QD=59.82;ReadPosRankSum=2.568;VQSLOD=5.5468;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.21:0,69,1123	1/1:1,1:2:4.26:71,4,0	0/0:25,0:24:60.20:0,60,960	0/0:19,0:19:54.16:0,54,848	0/0:2,0:2:6.02:0,6,100	0/0:10,0:10:21.07:0,21,348	0/0:34,0:34:99:0,99,1632	0/0:22,0:22:60.18:0,60,929	0/0:10,0:10:30.10:0,30,500	1/1:0,9:9:27.09:611,27,0	1/1:0,4:4:12.04:272,12,0	0/0:17,0:17:45.14:0,45,724	0/0:13,0:13:39.13:0,39,649	0/0:19,0:19:54.18:0,54,896	0/0:16,0:16:48.16:0,48,800	0/0:24,0:24:63.22:0,63,1047	1/1:0,33:33:96.29:2126,96,0	0/0:13,0:13:36.09:0,36,570	0/0:16,0:16:36.09:0,36,570	0/0:6,0:6:12.04:0,12,199	0/0:14,0:14:36.11:0,36,573	0/0:10,0:10:30.10:0,30,500	0/0:5,0:5:12.04:0,12,200	0/0:27,0:27:81.26:0,81,1318	0/0:8,0:8:24.08:0,24,400	0/0:13,0:13:36.12:0,36,578	0/0:11,0:11:33.11:0,33,541	0/0:5,0:5:15.05:0,15,250
chr10	86178321	.	AGAGT	A	6903.18	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=11.134;DP=414;FS=5.555;HRun=0;HaplotypeScore=79.8321;InbreedingCoeff=0.9660;MQ=83.11;MQ0=1;MQRankSum=-6.101;QD=45.42;ReadPosRankSum=-0.325;VQSLOD=5.0965;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.26:0,75,1988	1/1:0,1:1:3.01:57,3,0	0/0:8,0:8:18.06:0,18,488	0/0:22,0:21:61.53:0,62,1223	0/0:9,0:9:24.08:0,24,644	0/0:22,0:22:63.22:0,63,1700	0/0:20,0:20:60.21:0,60,1547	1/1:1,15:16:45.15:839,45,0	0/0:16,0:16:48.16:0,48,1282	1/1:0,10:10:30.06:525,30,0	1/1:0,10:10:26.96:402,27,0	0/0:15,0:15:42.14:0,42,1087	0/0:16,0:16:45.15:0,45,1192	0/0:13,0:13:39.13:0,39,991	0/0:15,0:15:45.15:0,45,1215	0/0:13,0:13:39.13:0,39,1045	1/1:1,27:28:69.24:1310,69,0	0/0:14,0:14:42.14:0,42,1134	1/1:2,12:14:36.09:611,36,0	1/1:0,6:6:15.01:248,15,0	1/1:1,30:31:72.63:1294,73,0	0/0:20,0:20:57.20:0,57,1524	0/0:9,0:9:24.08:0,24,592	0/0:11,0:11:33.11:0,33,889	0/0:14,0:14:42.14:0,42,1126	1/1:2,12:14:36.10:649,36,0	1/1:0,16:15:39.13:740,39,0	1/1:0,6:6:12.04:228,12,0
chr10	86178712	.	G	GCA	2403.90	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-7.617;DP=529;FS=1.262;HRun=0;HaplotypeScore=64.5757;InbreedingCoeff=0.9580;MQ=64.54;MQ0=4;MQRankSum=-0.293;QD=35.35;ReadPosRankSum=-0.113;VQSLOD=5.6189;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:75.15:0,75,886	1/1:0,4:4:12.04:200,12,0	0/0:25,0:9:7.99:0,8,162	0/0:21,0:10:14.12:0,14,158	0/0:17,0:17:39.12:0,39,492	0/0:17,0:17:42.13:0,42,530	0/0:15,0:15:33.10:0,33,416	0/0:33,0:33:69.20:0,69,847	0/0:18,0:18:42.12:0,42,517	1/1:7,21:28:63.19:1021,63,0	1/1:1,7:8:18.06:299,18,0	0/0:17,0:17:39.12:0,39,492	0/0:14,0:14:33.10:0,33,415	0/0:24,0:24:66.20:0,66,820	0/0:17,0:17:45.13:0,45,555	0/0:14,0:14:39.12:0,39,492	1/1:5,22:28:31.37:1042,31,0	0/0:22,0:22:63.20:0,63,795	0/0:15,0:15:33.11:0,33,417	0/0:7,0:7:15.05:0,15,189	0/0:40,0:41:81.08:0,81,984	0/0:9,0:9:21.07:0,21,265	0/0:13,0:13:36.10:0,36,440	0/0:26,0:26:72.23:0,72,909	0/0:13,0:13:30.10:0,30,378	0/0:20,0:20:48.15:0,48,606	0/0:24,0:24:60.16:0,60,740	0/0:9,0:9:27.07:0,27,327
chr10	86178817	.	GA	G	1022.72	PASS	AB=0.962;AC=16;AF=0.286;AN=56;BaseQRankSum=7.201;DP=319;FS=5.910;HRun=11;HaplotypeScore=45.3107;InbreedingCoeff=0.7385;MQ=67.75;MQ0=5;MQRankSum=-1.155;QD=9.65;ReadPosRankSum=-0.943;VQSLOD=1.8145;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.08:0,45,468	0/0:3,0:3:6.02:0,6,64	0/0:10,0:7:13.54:0,14,119	0/1:13,0:9:12.99:13,0,59	0/0:22,0:21:45.09:0,45,461	0/0:7,0:7:18.05:0,18,192	0/0:7,0:9:20.54:0,21,201	1/1:7,18:25:12.88:310,13,0	0/0:10,0:10:21.01:0,21,211	0/0:11,0:11:2.71:0,3,230	0/0:7,0:7:9.49:0,9,90	0/0:6,0:6:12.03:0,12,128	0/0:3,0:3:9.02:0,9,96	0/0:8,0:8:18.03:0,18,183	0/0:8,0:8:21.05:0,21,224	0/0:10,0:10:27.06:0,27,282	0/0:27,2:29:22.90:0,23,654	0/0:20,0:20:51.10:0,51,532	1/1:4,8:12:23.94:197,24,0	1/1:3,3:6:8.99:74,9,0	1/1:3,5:8:11.99:99,12,0	0/0:7,0:7:18.05:0,18,191	0/1:11,1:12:3.59:4,0,171	0/0:16,1:17:6.06:0,6,377	0/0:9,0:9:21.04:0,21,213	1/1:1,8:9:23.97:197,24,0	1/1:5,8:13:20.97:172,21,0	1/1:2,6:6:17.98:148,18,0
chr10	86178956	.	C	CA	3475.26	PASS	AC=22;AF=0.423;AN=52;BaseQRankSum=-3.514;DP=235;FS=3.636;HRun=7;HaplotypeScore=28.5962;InbreedingCoeff=0.8065;MQ=77.67;MQ0=2;MQRankSum=1.116;QD=28.96;ReadPosRankSum=1.090;VQSLOD=3.6178;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:33.05:0,33,319	1/1:1,2:3:6.02:72,6,0	0/0:10,0:7:12.39:0,12,94	0/0:13,0:9:1.61:0,2,57	0/0:7,0:7:15.01:0,15,139	0/0:11,0:11:33.03:0,33,307	0/0:3,0:3:9.01:0,9,87	1/1:4,18:22:54.16:649,54,0	./.	1/1:2,7:9:15.05:181,15,0	1/1:0,5:5:12.04:145,12,0	0/0:3,0:3:6.01:0,6,58	./.	0/0:3,0:3:9.01:0,9,87	0/0:2,0:2:6.01:0,6,58	0/0:2,0:2:6.01:0,6,57	1/1:2,26:28:72.22:870,72,0	0/0:26,0:26:69.08:0,69,659	1/1:2,9:10:27.08:326,27,0	1/1:1,3:4:6.02:72,6,0	1/1:2,6:8:12.04:145,12,0	0/0:3,0:3:3:0,3,29	0/0:6,0:6:12:0,12,110	0/0:3,0:3:6.01:0,6,58	0/0:7,0:7:18.03:0,18,173	1/1:1,7:8:21.06:254,21,0	1/1:0,8:8:24.07:290,24,0	1/1:0,14:14:39.12:471,39,0
chr10	86179137	.	G	GA	585.86	PASS	AB=0.823;AC=12;AF=0.222;AN=54;BaseQRankSum=-0.585;DP=315;FS=0.000;HRun=13;HaplotypeScore=47.6412;InbreedingCoeff=0.4428;MQ=52.46;MQ0=11;MQRankSum=-1.968;QD=5.58;ReadPosRankSum=-3.288;VQSLOD=0.6700;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,1:25:14.92:0,15,257	0/0:2,0:1:2.97:0,3,20	0/0:8,0:2:2.93:0,3,21	0/0:6,0:2:2.95:0,3,20	0/0:10,0:11:16.58:0,17,100	0/0:10,0:9:19.71:0,20,120	0/0:14,0:14:25.48:0,25,169	0/1:11,5:15:6.02:87,0,6	0/0:9,0:8:17.83:0,18,113	0/0:6,0:7:10.77:0,11,60	0/0:3,0:3:5.94:0,6,41	0/0:6,0:8:9.94:0,10,53	0/0:3,0:3:5.08:0,5,22	0/0:3,0:4:7.96:0,8,47	0/0:14,0:13:31.30:0,31,200	0/0:9,0:10:20.03:0,20,129	0/0:43,0:45:61.06:0,61,396	0/0:15,0:16:33.71:0,34,217	0/1:7,8:15:15.09:175,0,15	./.	1/1:4,11:15:11.95:101,12,0	0/0:5,0:5:2.90:0,3,20	0/0:7,0:7:16.92:0,17,109	0/1:19,0:19:0.91:1,0,177	0/1:5,1:7:11.51:12,0,33	1/1:2,9:11:23.76:202,24,0	1/1:3,8:11:11:80,11,0	1/1:0,7:8:9.01:84,9,0
chr10	86180316	.	A	AGAG	1555.98	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=-7.095;DP=616;FS=5.830;HRun=0;HaplotypeScore=82.7698;InbreedingCoeff=0.9365;MQ=56.55;MQ0=20;MQRankSum=1.486;QD=22.88;ReadPosRankSum=0.618;VQSLOD=3.2186;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:60.09:0,60,773	1/1:4,1:5:3.01:60,3,0	./.	0/0:24,0:11:15:0,15,179	0/0:19,0:19:32.68:0,33,418	0/0:22,0:22:51.17:0,51,722	0/0:21,0:21:42.11:0,42,558	0/0:19,0:16:18.05:0,18,224	0/0:34,0:32:75.21:0,75,992	1/1:5,11:16:30.09:533,30,0	1/1:3,17:21:33.10:587,33,0	0/0:30,0:29:63.12:0,63,824	0/0:14,0:14:30.10:0,30,423	0/0:21,0:20:42.13:0,42,580	0/0:24,0:24:54.16:0,54,734	0/0:26,0:26:57.16:0,57,762	1/1:9,16:25:27.09:526,27,0	0/0:11,0:10:18.06:0,18,256	0/0:15,0:10:18.05:0,18,240	0/0:14,0:15:33.05:0,33,425	0/0:48,0:47:99:0,111,1443	0/0:22,0:22:54.12:0,54,717	0/0:16,0:16:32.98:0,33,426	0/0:32,0:32:66.21:0,66,913	0/0:16,0:16:42.11:0,42,548	0/0:24,0:24:22.81:0,23,480	0/0:21,0:21:54.15:0,54,719	0/0:18,0:18:54.14:0,54,722
chr10	86188216	.	GGAGGAGGAA	G	2940.21	PASS	AB=0.792;AC=19;AF=0.352;AN=54;BaseQRankSum=9.488;DP=727;FS=1.252;HRun=0;HaplotypeScore=186.7353;InbreedingCoeff=0.8005;MQ=60.62;MQ0=5;MQRankSum=-0.980;QD=13.07;ReadPosRankSum=-1.491;VQSLOD=2.6259;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:72.18:0,72,2399	1/1:5,5:10:8.55:190,9,0	./.	0/0:29,0:22:5.96:0,6,44	0/0:26,0:25:54.09:0,54,1476	0/0:10,0:10:24.08:0,24,956	0/0:27,0:27:30.57:0,31,838	0/0:23,0:22:0:0,0,0	0/0:24,0:24:45.12:0,45,1482	1/1:4,9:13:21.04:368,21,0	1/1:3,6:9:9.03:161,9,0	0/0:30,0:30:60.21:0,60,2072	0/0:28,0:28:45.15:0,45,1522	0/0:33,0:33:45.14:0,45,1520	0/0:22,0:22:24.07:0,24,590	0/0:31,0:31:48.16:0,48,1807	1/1:20,17:37:6.02:162,6,0	0/0:35,0:35:57.19:0,57,2048	1/1:19,0:18:9.02:189,9,0	1/1:9,11:20:27.09:451,27,0	0/1:45,16:60:30.38:30,0,45	0/0:29,0:29:45.15:0,45,1613	0/0:17,0:17:21.07:0,21,662	0/0:42,0:42:66.22:0,66,2168	0/0:18,0:18:18.06:0,18,577	1/1:16,18:33:48.14:1083,48,0	1/1:8,9:17:16.87:420,17,0	1/1:5,0:5:3.01:79,3,0
chr10	86188655	.	AG	A	6658.73	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.310;DP=666;FS=12.928;HRun=7;HaplotypeScore=73.4217;InbreedingCoeff=0.9730;MQ=73.38;MQ0=0;MQRankSum=-2.899;QD=26.85;ReadPosRankSum=0.582;VQSLOD=4.5556;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,138,1678	1/1:2,9:11:27.06:275,27,0	0/0:23,0:22:40.36:0,40,471	0/0:13,1:14:2.48:0,2,325	0/0:34,0:34:83.93:0,84,1033	0/0:20,0:20:60.12:0,60,735	0/0:27,0:27:78.22:0,78,953	1/1:5,25:30:75.14:751,75,0	0/0:23,0:23:63.20:0,63,792	1/1:0,27:27:81.15:812,81,0	1/1:1,19:20:54.12:551,54,0	0/0:18,0:18:48.13:0,48,578	0/0:23,0:23:69.21:0,69,851	0/0:25,0:25:63.18:0,63,768	0/0:26,0:26:75.12:0,75,909	0/0:26,0:26:78.25:0,78,981	1/1:2,18:20:48.11:490,48,0	0/0:25,0:25:60.19:0,60,755	1/1:0,23:23:69.13:692,69,0	1/1:1,28:29:84.19:855,84,0	1/1:2,22:24:57.13:582,57,0	0/0:24,0:24:66.21:0,66,828	0/0:19,0:19:54.16:0,54,660	0/0:25,0:25:63.13:0,63,747	0/0:17,0:17:48.13:0,48,579	1/1:1,24:25:72.16:734,72,0	1/1:4,18:22:51.11:520,51,0	1/1:0,17:17:39.09:398,39,0
chr10	86189129	.	A	ATGTGTGTG	3747.41	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.965;DP=786;FS=9.981;HRun=0;HaplotypeScore=201.9584;InbreedingCoeff=0.9379;MQ=58.10;MQ0=7;MQRankSum=-5.100;QD=46.84;ReadPosRankSum=-2.313;VQSLOD=2.0357;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,114,2638	1/1:12,6:18:23.82:435,24,0	0/0:20,0:14:38.13:0,38,702	0/0:21,0:13:30.10:0,30,702	0/0:26,0:26:75.24:0,75,1910	0/0:24,0:24:66.21:0,66,1654	0/0:25,0:25:63.62:0,64,1498	0/0:25,0:25:66.18:0,66,1382	0/0:32,0:32:90.26:0,90,2170	1/1:22,8:30:82.50:2468,83,0	1/1:4,5:9:3.01:48,3,0	0/0:38,0:38:99:0,99,2393	0/0:25,0:25:69.21:0,69,1774	0/0:33,0:33:96.28:0,96,2381	0/0:28,0:28:75.22:0,75,1907	0/0:29,0:29:78.24:0,78,1962	1/1:19,3:20:11.31:796,11,0	0/0:35,0:35:86.67:0,87,2081	0/0:20,0:17:38.11:0,38,790	0/0:17,0:17:48.15:0,48,1159	0/0:58,0:58:99:0,168,4356	0/0:17,0:17:45.14:0,45,1175	0/0:19,0:19:54.17:0,54,1411	0/0:43,0:43:99:0,108,2651	0/0:26,0:26:75.24:0,75,1872	0/0:35,0:34:99:0,99,2507	0/0:48,0:48:99:0,135,3479	0/0:20,0:20:54.18:0,54,1253
chr10	86189157	.	A	ATG	1107.58	PASS	AB=0.598;AC=6;AF=0.107;AN=56;BaseQRankSum=2.333;DP=801;FS=0.000;HRun=0;HaplotypeScore=120.1183;InbreedingCoeff=0.7419;MQ=60.41;MQ0=2;MQRankSum=0.813;QD=13.03;ReadPosRankSum=-2.293;VQSLOD=3.1239;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:84.16:0,84,964	1/1:5,9:14:15.05:244,15,0	0/0:22,0:18:40.89:0,41,487	0/0:22,0:20:40.71:0,41,492	0/0:29,0:30:81.04:0,81,944	0/0:21,0:21:48.12:0,48,566	0/0:35,0:37:91.32:0,91,1009	0/0:23,0:23:40.39:0,40,483	0/0:30,0:30:69.18:0,69,821	1/1:13,21:34:27.72:901,28,0	0/1:2,11:14:0.07:0,0,0	0/0:31,0:31:66.09:0,66,743	0/0:20,0:21:47.98:0,48,568	0/0:31,0:31:84.23:0,84,997	0/0:32,0:34:86.91:0,87,999	0/0:29,0:29:69.01:0,69,812	0/1:11,11:22:28.38:89,0,28	0/0:34,0:34:64.01:0,64,778	0/0:24,0:23:45.05:0,45,503	0/0:18,0:18:42.13:0,42,516	0/0:66,0:66:99:0,156,1781	0/0:21,0:21:54.10:0,54,622	0/0:20,0:20:51.12:0,51,590	0/0:45,0:45:99:0,117,1400	0/0:25,0:25:57.17:0,57,689	0/0:34,0:33:80.99:0,81,924	0/0:45,0:45:99:0,108,1272	0/0:14,0:14:27.07:0,27,319
chr10	86189344	.	ATGTG	A	3024.25	PASS	AB=0.812;AC=21;AF=0.375;AN=56;BaseQRankSum=9.498;DP=645;FS=1.582;HRun=0;HaplotypeScore=124.2686;InbreedingCoeff=0.6771;MQ=62.41;MQ0=7;MQRankSum=-2.175;QD=10.69;ReadPosRankSum=1.291;VQSLOD=3.1317;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:48:29.60:0,30,1344	1/1:6,0:10:8.93:75,9,0	0/0:19,0:13:6.02:0,6,82	0/0:21,0:14:3:0,3,25	0/0:20,1:21:21.07:0,21,460	0/0:12,0:14:20.54:0,21,385	0/0:28,0:28:38.64:0,39,724	0/1:19,6:24:14.01:91,0,14	0/0:15,0:18:35.59:0,36,725	1/1:18,0:31:48.51:461,49,0	1/1:6,0:15:2.92:28,3,0	0/0:23,0:23:36.12:0,36,799	0/0:11,0:11:24.07:0,24,482	0/0:27,0:27:44.86:0,45,896	0/1:16,1:17:17.93:18,0,589	0/0:14,0:15:26.71:0,27,588	1/1:12,0:27:8.97:133,9,0	0/0:10,0:27:42.57:0,43,781	1/1:14,5:19:14.08:232,14,0	1/1:14,8:21:9.03:144,9,0	0/1:27,23:50:21.55:717,0,22	0/0:14,0:14:24.08:0,24,539	0/0:16,0:16:21.06:0,21,451	0/0:41,0:42:85.84:0,86,1950	0/0:14,0:15:26.83:0,27,544	1/1:14,10:24:27.07:407,27,0	1/1:13,14:27:36.11:556,36,0	1/1:2,12:15:24.08:364,24,0
chr10	86196331	.	GTC	G	758.25	PASS	AB=0.987;AC=12;AF=0.222;AN=54;BaseQRankSum=10.050;DP=609;FS=11.650;HRun=0;HaplotypeScore=100.3319;InbreedingCoeff=0.2870;MQ=48.61;MQ0=22;MQRankSum=-4.377;QD=3.75;ReadPosRankSum=-3.865;VQSLOD=0.1299;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:14.43:0,14,500	0/0:6,0:6:11.98:0,12,101	0/0:13,0:3:2.96:0,3,19	0/1:22,0:2:0.83:1,0,25	0/0:13,0:12:8.96:0,9,207	0/0:19,0:18:5.19:0,5,430	0/0:51,0:48:56.80:0,57,891	1/1:15,0:15:26.37:146,26,0	0/0:22,0:22:35.63:0,36,580	0/1:19,1:18:96.79:97,0,198	0/0:8,0:8:8.99:0,9,76	0/0:24,1:25:5.58:0,6,598	0/0:21,0:21:22.90:0,23,444	0/0:26,0:26:52.50:0,53,775	0/0:20,0:19:28.71:0,29,543	0/0:23,0:22:46.92:0,47,623	0/1:32,1:32:98.16:98,0,106	0/0:25,0:25:39.26:0,39,705	0/1:10,0:9:17.63:53,0,18	./.	1/1:66,0:56:36.50:259,37,0	0/0:7,0:6:6.13:0,6,201	0/0:11,0:11:20.99:0,21,238	0/0:65,1:65:99:0,106,1860	0/0:13,0:13:20.32:0,20,249	0/1:21,0:19:5.31:173,0,5	0/1:13,0:13:36.75:61,0,37	1/1:2,0:2:2.99:23,3,0
chr10	86196351	.	CTG	C	358.14	PASS	AB=0.970;AC=9;AF=0.173;AN=52;BaseQRankSum=10.270;DP=622;FS=0.000;HRun=0;HaplotypeScore=109.4753;InbreedingCoeff=0.5352;MQ=49.79;MQ0=32;MQRankSum=-1.226;QD=2.80;ReadPosRankSum=0.657;VQSLOD=2.1791;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:75.23:0,75,1242	0/0:6,0:6:2.87:0,3,85	0/0:30,0:9:21.91:0,22,295	0/0:47,0:13:36.19:0,36,484	0/0:12,0:11:24.08:0,24,403	0/0:20,0:19:39.13:0,39,638	0/0:56,0:53:99:0,111,1706	1/1:13,0:13:0.97:81,1,0	0/0:27,0:27:54.55:0,55,764	0/0:13,0:11:8.26:0,8,148	0/1:6,0:6:1.70:2,0,39	0/0:30,0:30:62.17:0,62,976	0/0:17,0:17:29.12:0,29,543	0/0:25,0:25:60.08:0,60,952	0/0:23,0:22:36.12:0,36,573	0/0:25,0:24:57.17:0,57,907	0/1:35,0:34:0.01:0,0,32	0/0:24,0:24:58.60:0,59,1011	0/1:9,1:9:18.44:18,0,33	./.	1/1:47,1:39:30.01:223,30,0	0/0:8,0:7:15.03:0,15,219	0/0:13,0:13:36.12:0,36,608	0/0:64,0:63:99:0,148,2469	0/0:11,0:11:26.45:0,26,416	1/1:15,1:14:9.60:163,10,0	0/0:4,0:4:0:0,0,0	./.
chr10	86196353	.	G	GTC	1395.59	PASS	AB=0.788;AC=6;AF=0.115;AN=52;BaseQRankSum=8.818;DP=635;FS=0.605;HRun=0;HaplotypeScore=113.9119;InbreedingCoeff=0.5050;MQ=49.80;MQ0=31;MQRankSum=-4.555;QD=14.85;ReadPosRankSum=-2.334;VQSLOD=2.9413;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:78.23:0,78,1146	0/0:6,0:6:12.04:0,12,169	0/0:29,0:9:4.17:0,4,255	0/0:50,0:16:38.35:0,38,525	0/0:11,0:10:24.08:0,24,364	0/0:20,0:19:39.13:0,39,596	0/0:56,0:53:99:0,117,1648	1/1:9,5:14:9.26:336,9,0	0/0:27,0:27:57.55:0,58,738	0/0:13,0:11:27.53:0,28,284	0/0:6,0:6:11.99:0,12,142	0/0:31,0:31:69.17:0,69,979	0/0:17,0:17:42.20:0,42,561	0/0:26,0:26:60.17:0,60,873	0/0:25,0:24:36.12:0,36,548	0/0:25,0:24:60.18:0,60,874	0/0:35,0:34:7.98:0,8,241	0/0:24,0:24:61.58:0,62,939	0/1:9,2:10:37.35:144,0,37	./.	1/1:36,14:41:34.94:592,35,0	0/0:8,0:7:15.03:0,15,205	0/0:12,0:12:36.12:0,36,547	0/0:64,0:64:99:0,165,2389	0/0:11,0:11:23.36:0,23,365	0/1:12,7:17:23.59:452,0,24	0/0:5,0:5:5.90:0,6,37	./.
chr10	86196355	.	G	GTC	388.56	PASS	AB=0.868;AC=11;AF=0.212;AN=52;BaseQRankSum=9.761;DP=629;FS=7.817;HRun=0;HaplotypeScore=114.9787;InbreedingCoeff=0.1578;MQ=50.03;MQ0=32;MQRankSum=-3.479;QD=2.52;ReadPosRankSum=-0.424;VQSLOD=1.6650;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:77.91:0,78,1133	0/1:4,2:7:5.82:6,0,79	0/0:32,0:10:26.84:0,27,327	0/0:50,0:16:34.78:0,35,468	0/0:11,0:10:24.08:0,24,365	0/0:19,0:18:39.13:0,39,583	0/0:56,0:53:99:0,111,1588	0/1:14,0:14:46.47:65,0,46	0/0:27,0:27:57.54:0,58,736	0/1:11,3:12:57.62:92,0,58	0/1:3,3:6:32.96:33,0,36	0/0:30,0:30:69.12:0,69,976	0/0:18,0:18:39.11:0,39,566	0/0:26,0:26:63.15:0,63,892	0/0:25,0:24:36.12:0,36,548	0/0:25,0:24:63.14:0,63,890	0/1:26,4:29:5.05:120,0,5	0/0:23,1:24:23.53:0,24,886	1/1:13,0:12:0.45:49,0,0	./.	1/1:46,0:38:9.48:59,9,0	0/0:8,0:7:15.03:0,15,205	0/0:12,0:12:36.12:0,36,548	0/0:61,0:61:99:0,159,2336	0/0:11,0:11:26.30:0,26,373	0/1:20,0:18:21.95:91,0,22	0/1:4,0:4:11.81:14,0,12	./.
chr10	86196357	.	GTGTC	G	704.52	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=1.676;DP=625;FS=0.000;HRun=0;HaplotypeScore=129.4391;InbreedingCoeff=0.8744;MQ=50.26;MQ0=31;MQRankSum=0.963;QD=12.58;ReadPosRankSum=2.978;VQSLOD=2.9507;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:78.20:0,78,1638	1/1:7,0:7:8.99:116,9,0	0/0:33,0:11:27.01:0,27,440	0/0:52,0:18:38.79:0,39,601	0/0:11,0:10:21.07:0,21,497	0/0:19,0:18:24.08:0,24,557	0/0:55,0:52:84.25:0,84,1760	0/0:15,0:15:29.97:0,30,269	0/0:27,0:27:33.11:0,33,743	1/1:12,1:11:18.05:268,18,0	1/1:6,0:6:9.03:145,9,0	0/0:31,0:31:51.15:0,51,1087	0/0:17,0:17:27.08:0,27,570	0/0:26,0:26:48.16:0,48,1090	0/0:25,0:24:18.05:0,18,351	0/0:24,0:23:39.13:0,39,876	1/1:7,23:29:20.67:322,21,0	0/0:23,0:23:51.16:0,51,1141	0/0:11,0:11:9.59:0,10,137	./.	0/0:45,0:37:9.34:0,9,154	0/0:8,0:7:12.04:0,12,256	0/0:12,0:12:33.11:0,33,773	0/0:59,0:59:99:0,120,2656	0/0:11,0:11:21.02:0,21,499	0/0:22,0:20:41.47:0,41,308	0/0:2,0:2:3.01:0,3,39	./.
chr10	86196409	.	TGTC	T	3117.88	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.214;DP=532;FS=3.157;HRun=0;HaplotypeScore=103.3662;InbreedingCoeff=0.8953;MQ=89.80;MQ0=0;MQRankSum=-5.401;QD=34.26;ReadPosRankSum=1.599;VQSLOD=4.0667;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:99:0,102,2277	0/0:5,0:5:12.01:0,12,226	0/0:25,0:23:66.20:0,66,1378	0/0:30,0:30:75.14:0,75,1523	0/0:8,0:8:24.08:0,24,542	0/0:19,0:19:51.17:0,51,1154	0/0:35,0:35:93.28:0,93,1978	1/1:2,11:13:33.09:500,33,0	0/0:21,0:21:63.22:0,63,1419	0/0:14,0:14:39.13:0,39,883	0/0:2,0:2:6.02:0,6,136	0/0:24,0:24:66.21:0,66,1446	0/0:17,0:17:48.16:0,48,1083	0/0:24,0:24:63.20:0,63,1358	0/0:17,0:17:48.16:0,48,1084	0/0:20,0:20:60.21:0,60,1331	0/0:35,0:35:57.13:0,57,1240	0/0:23,0:23:66.23:0,66,1475	1/1:1,10:11:24.08:400,24,0	1/1:0,2:2:6.02:100,6,0	1/1:2,28:30:57.19:949,57,0	0/0:10,0:10:30.10:0,30,659	0/0:13,0:13:33.11:0,33,746	0/0:47,0:47:99:0,129,2803	0/0:8,0:8:24.08:0,24,543	1/1:3,23:26:1.26:1000,1,0	1/1:0,6:6:12.04:200,12,0	1/1:0,3:3:9.03:150,9,0
chr10	86198724	.	C	CCT	683.88	PASS	AB=0.904;AC=18;AF=0.321;AN=56;BaseQRankSum=4.935;DP=319;FS=5.104;HRun=0;HaplotypeScore=55.9428;InbreedingCoeff=-0.3991;MQ=44.29;MQ0=4;MQRankSum=-3.561;QD=3.12;ReadPosRankSum=-1.736;VQSLOD=0.5225;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,2:15:32.56:109,0,33	0/0:2,0:2:2.99:0,3,25	0/1:12,1:8:15.05:15,0,165	0/0:14,0:9:14.88:0,15,189	1/1:10,1:10:0.22:0,0,0	0/1:12,3:14:89.76:90,0,219	0/0:20,0:17:3.45:0,3,398	0/1:11,2:13:62.54:63,0,216	0/1:8,1:9:32.96:78,0,33	0/1:22,1:20:7.81:8,0,596	0/0:7,1:8:4.26:0,4,48	0/0:7,1:8:17.71:0,18,205	0/1:11,0:10:2.40:2,0,192	0/0:3,1:4:3.22:0,3,59	0/0:4,0:4:6.02:0,6,91	0/1:6,1:7:99:121,0,120	0/1:12,1:12:0.64:1,0,178	0/1:8,0:7:6.80:7,0,167	0/1:14,1:15:99:106,0,373	0/1:12,1:13:14.90:15,0,19	0/0:12,0:12:21.07:0,21,288	0/1:9,2:11:32.07:47,0,32	0/0:6,1:8:3.01:0,3,46	0/0:15,0:14:1.29:0,1,137	0/1:8,2:10:5.17:5,0,81	0/1:17,4:19:99:150,0,507	0/1:9,0:8:3.03:3,0,127	0/0:5,0:5:9.02:0,9,104
chr10	86198725	.	C	CTT	568.50	PASS	AB=0.921;AC=17;AF=0.304;AN=56;BaseQRankSum=3.310;DP=321;FS=2.763;HRun=0;HaplotypeScore=55.1380;InbreedingCoeff=-0.3766;MQ=44.28;MQ0=4;MQRankSum=-3.392;QD=2.75;ReadPosRankSum=-2.910;VQSLOD=1.0143;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,1:15:64.25:127,0,64	0/0:2,0:2:3.01:0,3,47	0/1:15,0:8:39.84:40,0,213	0/0:13,0:9:17.84:0,18,227	1/1:11,0:10:0.47:1,0,0	0/1:16,0:14:52.33:52,0,213	0/0:19,0:17:23.78:0,24,513	0/1:12,0:13:8.33:8,0,213	0/1:8,1:9:55.46:79,0,55	0/1:22,1:20:9.55:10,0,575	0/1:7,1:8:9.65:10,0,33	0/0:8,0:8:17.16:0,17,201	0/1:10,1:10:21.59:22,0,199	0/1:4,0:4:15.14:15,0,69	0/0:4,0:4:6.02:0,6,87	0/1:4,3:7:99:143,0,128	0/0:13,0:12:15.44:0,15,236	0/0:8,0:7:7.99:0,8,182	0/1:15,0:15:34.32:34,0,370	0/1:11,1:13:38.43:38,0,53	0/0:13,0:13:21.07:0,21,339	0/1:8,3:11:27.96:67,0,28	0/0:8,0:8:3.01:0,3,49	0/1:14,0:14:10.96:11,0,187	0/0:8,0:10:5.75:0,6,97	0/1:21,0:19:59.42:59,0,480	0/0:7,0:8:12.91:0,13,162	0/0:5,0:5:8.61:0,9,86
chr10	86198730	.	C	CCT	399.88	PASS	AB=0.971;AC=18;AF=0.321;AN=56;BaseQRankSum=4.872;DP=340;FS=18.078;HRun=0;HaplotypeScore=67.9115;InbreedingCoeff=-0.3740;MQ=48.80;MQ0=4;MQRankSum=-5.501;QD=1.83;ReadPosRankSum=0.778;VQSLOD=-0.0976;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:69.01:69,0,111	0/0:1,1:2:3.01:0,3,46	0/0:18,0:11:32.83:0,33,365	0/1:16,0:11:37.73:38,0,198	1/1:9,0:10:0.47:1,0,0	0/1:16,0:14:36.81:37,0,138	0/0:20,1:18:42.44:0,42,528	0/1:15,0:15:36.18:36,0,230	0/1:9,0:9:3.66:4,0,121	0/1:23,1:21:21.22:21,0,543	0/0:9,0:9:5.34:0,5,28	0/0:8,0:8:12.22:0,12,129	0/1:10,0:10:14.28:14,0,161	0/1:5,0:5:5.08:5,0,39	0/0:4,0:4:5.98:0,6,66	0/1:8,0:8:3.52:4,0,164	0/1:12,1:12:69.64:70,0,193	0/1:8,0:7:11.52:12,0,129	0/1:15,1:16:99:115,0,364	0/0:14,0:14:10.91:0,11,85	0/0:13,0:13:24.08:0,24,366	0/1:11,0:11:10.88:20,0,11	0/0:6,0:8:3.01:0,3,46	0/0:15,1:15:8.21:0,8,255	0/1:12,0:12:5.16:5,0,84	0/1:21,1:20:52.07:52,0,368	0/0:9,0:8:14.96:0,15,173	0/1:4,1:5:43.08:43,0,45
chr10	86198731	.	C	CTT	290.67	PASS	AB=0.978;AC=18;AF=0.321;AN=56;BaseQRankSum=4.429;DP=342;FS=20.453;HRun=0;HaplotypeScore=69.9743;InbreedingCoeff=-0.3760;MQ=48.96;MQ0=4;MQRankSum=-6.285;QD=1.32;ReadPosRankSum=-1.762;VQSLOD=-0.1636;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,1:16:68.48:68,0,176	0/0:2,0:2:3.01:0,3,49	0/0:18,0:11:27.88:0,28,383	0/1:15,0:11:6:6,0,199	1/1:10,1:10:0.94:1,1,0	0/1:17,0:15:44.57:45,0,194	0/0:20,1:18:40.74:0,41,592	0/1:15,0:15:14.47:14,0,250	0/1:9,0:9:3.24:3,0,117	0/1:24,0:21:11.42:11,0,568	0/0:9,0:9:5.34:0,5,28	0/1:8,0:8:5.37:5,0,131	0/1:10,1:10:33.12:33,0,150	0/1:5,0:5:24.65:25,0,34	0/0:4,0:4:6.02:0,6,85	0/0:8,0:8:16.54:0,17,217	0/1:13,0:12:32.86:33,0,205	0/1:8,0:7:33.84:34,0,124	0/1:17,0:17:32.42:32,0,331	0/1:13,0:14:14.35:14,0,88	0/0:13,0:13:20.14:0,20,385	0/1:10,1:11:10.55:30,0,11	0/0:8,0:8:3.01:0,3,49	0/0:17,0:16:19.03:0,19,295	0/0:12,0:12:12.28:0,12,142	0/1:21,0:19:58.03:58,0,361	0/0:9,0:8:14.97:0,15,175	0/1:5,0:5:24.14:24,0,47
chr10	86198736	.	CCCCG	C	461.05	PASS	AB=0.970;AC=15;AF=0.268;AN=56;BaseQRankSum=7.518;DP=350;FS=38.673;HRun=0;HaplotypeScore=69.6746;InbreedingCoeff=-0.2441;MQ=54.51;MQ0=4;MQRankSum=-5.292;QD=2.55;ReadPosRankSum=-0.293;VQSLOD=-0.3932;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,2:16:7.07:7,0,405	0/0:2,0:2:3.01:0,3,82	0/0:22,0:15:7.21:0,7,609	0/1:19,1:15:27.94:28,0,526	0/0:12,0:11:3.48:0,3,49	0/1:16,0:15:30.28:30,0,445	0/0:22,0:19:37.80:0,38,870	0/0:16,0:16:5.13:0,5,423	0/1:8,1:9:48.71:49,0,105	0/1:23,1:22:56.75:57,0,802	0/0:9,0:9:5.78:0,6,117	0/1:8,0:8:8.47:8,0,246	0/1:10,0:9:42.63:43,0,170	1/1:5,1:6:6.02:91,6,0	0/1:4,0:4:34.84:35,0,62	0/0:8,0:8:9.42:0,9,412	0/0:13,0:13:9.48:0,9,592	0/1:8,0:7:2.19:2,0,325	0/1:17,0:17:88.28:88,0,601	0/1:10,0:10:9.97:10,0,145	0/0:14,0:14:27.09:0,27,722	0/1:9,1:10:2.73:3,0,9	0/0:8,0:8:3.48:0,3,60	0/0:18,0:18:21.55:0,22,646	0/0:12,0:12:15.52:0,16,381	0/1:23,0:22:99:154,0,581	0/0:8,0:7:9:0,9,136	0/0:5,0:5:5.67:0,6,98
chr10	86198737	.	CCCG	C	145.24	PASS	AB=0.906;AC=13;AF=0.232;AN=56;BaseQRankSum=6.844;DP=335;FS=26.540;HRun=0;HaplotypeScore=66.3748;InbreedingCoeff=-0.0833;MQ=57.53;MQ0=4;MQRankSum=-6.512;QD=1.13;ReadPosRankSum=-1.787;VQSLOD=-0.2570;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,2:16:9.32:0,9,398	0/0:2,0:2:3:0,3,70	0/1:22,0:16:7.95:8,0,572	0/0:21,0:16:13.03:0,13,484	0/0:10,0:10:2.87:0,3,42	0/1:16,0:15:14.51:15,0,411	0/0:20,0:18:33.45:0,33,774	0/0:13,2:15:8.75:0,9,369	0/1:8,1:9:21.60:22,0,139	0/0:22,1:21:0.66:0,1,715	0/0:9,0:9:6.02:0,6,104	0/1:8,0:8:3.19:3,0,189	0/1:7,2:9:37.19:37,0,148	1/1:5,1:6:5.91:48,6,0	0/1:3,1:4:29.84:30,0,61	0/0:8,0:8:20.76:0,21,394	0/0:11,0:12:15.18:0,15,551	0/0:5,2:6:8.31:0,8,275	0/1:13,2:15:55.41:55,0,540	0/0:10,0:10:3.23:0,3,134	0/0:12,1:13:27.09:0,27,619	1/1:8,0:9:3.21:17,3,0	0/0:7,0:7:3.01:0,3,41	0/0:18,0:18:27.39:0,27,598	0/0:10,0:10:8.06:0,8,312	0/1:17,2:20:43.19:43,0,505	0/1:7,0:7:7.71:8,0,105	0/0:5,0:5:4.26:0,4,77
chr10	86198738	.	CCG	C	125.11	PASS	AB=0.992;AC=13;AF=0.232;AN=56;BaseQRankSum=7.618;DP=324;FS=12.081;HRun=0;HaplotypeScore=60.7562;InbreedingCoeff=-0.1856;MQ=59.29;MQ0=4;MQRankSum=-5.497;QD=0.72;ReadPosRankSum=-1.132;VQSLOD=0.1306;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:7.77:0,8,326	0/0:1,1:2:3.01:0,3,61	0/1:23,0:16:0.73:1,0,403	0/1:22,0:17:32.99:33,0,382	0/0:10,0:9:2.82:0,3,41	0/1:17,0:16:5.19:5,0,349	0/1:18,1:17:9.67:10,0,616	0/0:15,0:15:14.79:0,15,303	0/1:10,0:10:29.33:29,0,101	0/1:22,1:21:3.70:4,0,565	0/0:8,1:9:7.87:0,8,100	0/0:7,1:8:2.41:0,2,165	0/1:9,0:8:21.72:22,0,117	1/1:6,0:6:5.75:33,6,0	0/1:3,0:3:14.02:14,0,54	0/0:7,0:7:17.93:0,18,316	0/0:13,0:13:13.29:0,13,457	0/0:8,0:7:15.02:0,15,229	0/1:14,0:14:49.98:50,0,394	0/0:7,0:7:5.99:0,6,121	0/0:12,0:12:27.09:0,27,532	0/0:7,0:7:2.37:0,2,8	0/0:4,1:5:3.01:0,3,36	0/0:18,0:18:29.40:0,29,518	0/0:8,2:10:15.22:0,15,279	0/1:21,0:20:45.20:45,0,367	0/1:7,0:7:17.36:17,0,57	0/0:5,0:5:2.96:0,3,62
chr10	86199058	.	ATG	A	605.77	PASS	AB=1.000;AC=29;AF=0.604;AN=48;BaseQRankSum=1.453;DP=392;FS=3.309;HRun=0;HaplotypeScore=71.2137;InbreedingCoeff=0.5628;MQ=62.50;MQ0=15;MQRankSum=0.034;QD=3.21;ReadPosRankSum=2.828;VQSLOD=1.8057;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:24:4.48:4,0,130	0/0:6,0:6:3:0,3,25	./.	./.	1/1:11,2:12:6.01:64,6,0	1/1:7,7:15:11.86:110,12,0	1/1:12,1:13:0.47:1,0,0	0/0:16,0:15:2.96:0,3,19	1/1:12,4:16:3.01:32,3,0	0/0:17,0:15:13.27:0,13,140	./.	1/1:6,3:9:3:32,3,0	1/1:5,2:7:8.86:78,9,0	1/1:10,0:10:12.15:84,12,0	1/1:5,0:9:2.58:14,3,0	1/1:3,0:11:17.04:84,17,0	0/0:22,0:22:14.97:0,15,122	1/1:9,12:20:12.03:129,12,0	0/0:30,0:30:15.05:0,15,198	0/0:9,0:9:3:0,3,25	./.	1/1:3,0:3:2.99:24,3,0	1/1:8,3:11:3:32,3,0	1/1:11,0:13:5.68:28,6,0	1/1:7,3:11:5.85:46,6,0	0/0:13,0:23:23.91:0,24,201	0/0:14,0:14:17.48:0,17,152	0/0:8,0:6:0.47:0,0,1
chr10	86204871	.	G	GC	8890.34	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.426;DP=767;FS=0.000;HRun=1;HaplotypeScore=81.9817;InbreedingCoeff=0.9999;MQ=60.37;MQ0=2;MQRankSum=-2.568;QD=41.16;ReadPosRankSum=0.811;VQSLOD=5.1846;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,184,2330	0/0:11,0:11:33.11:0,33,428	0/0:21,0:18:40.73:0,41,512	0/0:19,2:15:45.11:0,45,558	0/0:22,0:22:66.20:0,66,842	0/0:27,0:27:81.26:0,81,1052	0/0:31,0:31:84.26:0,84,1072	1/1:5,41:46:99:1801,129,0	0/0:20,0:20:54.18:0,54,701	0/0:28,0:29:81.24:0,81,1017	0/0:17,0:17:51.17:0,51,662	0/0:28,0:28:81.26:0,81,1052	0/0:30,0:30:87.28:0,87,1130	0/0:26,0:26:75.24:0,75,974	0/0:28,0:28:81.26:0,81,1052	0/0:18,0:18:51.15:0,51,648	0/0:44,0:44:99:0,129,1675	0/0:27,0:27:60.27:0,60,991	1/1:3,17:20:51.16:744,51,0	1/1:0,16:16:42.14:629,42,0	1/1:1,67:68:99:2833,190,0	0/0:25,0:25:75.24:0,75,974	0/0:18,0:18:54.15:0,54,673	0/0:27,0:27:78.23:0,78,997	0/0:18,0:17:51.17:0,51,662	1/1:1,28:29:48.33:1220,48,0	1/1:0,23:23:69.23:1034,69,0	1/1:0,14:14:42.14:629,42,0
chr10	86206952	.	GGGAAGGGAAA	G	6557.17	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.401;DP=584;FS=5.051;HRun=0;HaplotypeScore=146.1842;InbreedingCoeff=0.9800;MQ=56.78;MQ0=22;MQRankSum=-7.619;QD=54.19;ReadPosRankSum=-2.383;VQSLOD=3.6607;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.18:0,72,3153	0/0:6,0:6:12.04:0,12,563	0/0:74,0:17:11.42:0,11,708	0/0:90,0:23:40.06:0,40,547	0/0:18,0:18:51.15:0,51,1993	0/0:11,0:11:30.10:0,30,1512	0/0:13,0:13:30.10:0,30,1448	1/1:4,21:25:62.86:1147,63,0	0/0:16,0:16:42.14:0,42,2049	0/0:19,0:19:51.04:0,51,2265	0/0:12,0:12:33.10:0,33,1513	0/0:11,0:11:27.09:0,27,1378	0/0:13,0:13:33.10:0,33,1350	0/0:14,0:13:36.05:0,36,1694	0/0:14,0:14:39.13:0,39,1850	0/0:17,0:17:33.11:0,33,1553	0/0:24,0:24:53.95:0,54,2066	0/0:15,0:15:39.08:0,39,1645	1/1:2,11:13:36.03:794,36,0	1/1:2,17:18:47.97:1202,48,0	1/1:1,11:12:17.99:458,18,0	0/0:13,0:13:36.12:0,36,1756	0/0:13,0:13:36.12:0,36,1616	0/0:25,0:24:60.19:0,60,2576	0/0:17,0:17:48.16:0,48,2318	1/1:4,20:24:60.08:1502,60,0	1/1:2,17:19:36.12:1150,36,0	1/1:1,8:9:11.83:305,12,0
chr10	86208035	.	TCAGGGCAGGG	T	415.66	PASS	AB=1.000;AC=7;AF=0.146;AN=48;BaseQRankSum=4.075;DP=450;FS=3.332;HRun=0;HaplotypeScore=125.9145;InbreedingCoeff=0.5989;MQ=73.24;MQ0=3;MQRankSum=-2.927;QD=7.70;ReadPosRankSum=-0.549;VQSLOD=2.0737;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:27.08:0,27,956	1/1:4,1:5:6.02:168,6,0	0/1:14,0:8:0:0,0,0	0/0:42,0:20:16.60:0,17,204	./.	0/0:11,0:11:9.03:0,9,449	0/0:45,0:45:72.25:0,72,3127	0/0:8,0:8:9.03:0,9,227	0/0:13,0:13:33.11:0,33,1558	1/1:7,2:9:6.02:180,6,0	0/0:5,0:5:0:0,0,0	0/0:22,0:22:39.13:0,39,1809	0/0:12,0:12:21.07:0,21,872	0/0:15,0:15:27.08:0,27,1145	0/0:10,0:10:21.07:0,21,978	0/0:9,0:9:12.04:0,12,526	1/1:22,4:26:6.02:180,6,0	0/0:36,0:36:48.16:0,48,2252	0/0:14,0:14:3.01:0,3,131	./.	0/0:42,0:42:29.36:0,29,937	./.	./.	0/0:56,0:56:99:0,120,5592	0/0:9,0:9:21.06:0,21,897	0/0:5,0:5:3.01:0,3,142	0/0:2,0:3:3.01:0,3,131	0/0:2,0:2:3.01:0,3,140
chr10	86209359	.	T	TTCTC	623.68	PASS	AB=1.000;AC=27;AF=0.563;AN=48;BaseQRankSum=-0.325;DP=561;FS=0.000;HRun=0;HaplotypeScore=107.3744;InbreedingCoeff=0.3265;MQ=54.43;MQ0=14;MQRankSum=-0.735;QD=1.97;ReadPosRankSum=-2.737;VQSLOD=1.5449;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:9.58:0,10,157	1/1:6,0:6:3.01:43,3,0	./.	./.	0/0:19,0:19:2.25:0,2,45	0/1:23,0:23:4.67:5,0,64	0/0:27,0:27:9.69:0,10,74	./.	0/1:10,0:11:16.13:16,0,25	1/1:22,0:22:21.44:312,21,0	1/1:21,0:21:5.75:77,6,0	0/1:23,0:23:4.08:4,0,261	0/0:15,0:16:19.84:0,20,187	0/0:17,0:17:12.74:0,13,119	0/0:15,0:17:27.58:0,28,280	0/0:17,0:17:2.86:0,3,135	1/1:8,8:15:3.01:70,3,0	1/1:15,6:22:5.49:122,5,0	1/1:24,0:23:3.55:8,4,0	1/1:11,0:11:0.47:1,0,0	1/1:27,0:26:3.89:27,4,0	0/0:20,0:20:9.01:0,9,104	0/1:15,0:14:9.48:9,0,41	0/1:36,0:36:2.53:3,0,132	1/1:21,0:21:0.47:1,0,0	1/1:29,0:29:0.83:25,1,0	1/1:9,0:9:5.98:47,6,0	./.
chr10	86211499	.	CA	C	1044.17	PASS	AB=0.856;AC=22;AF=0.393;AN=56;BaseQRankSum=5.713;DP=507;FS=12.539;HRun=14;HaplotypeScore=62.7257;InbreedingCoeff=0.3007;MQ=52.47;MQ0=17;MQRankSum=0.767;QD=3.81;ReadPosRankSum=0.781;VQSLOD=-0.3157;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:29:56.69:0,57,473	0/1:4,2:5:8.14:8,0,64	0/1:12,0:7:1.43:1,0,47	0/1:10,0:5:3.28:3,0,7	0/0:17,1:18:21.23:0,21,311	0/1:11,1:13:3.46:3,0,131	0/1:14,6:20:38.57:39,0,138	0/1:17,12:30:40.28:157,0,40	0/1:18,2:20:18.92:19,0,230	0/0:15,1:16:9.41:0,9,222	0/0:10,2:13:3.32:0,3,155	0/1:11,2:14:8.31:8,0,192	0/0:8,0:7:11.88:0,12,87	0/0:15,0:15:7.95:0,8,75	0/0:8,0:9:20.82:0,21,174	0/1:16,2:20:6.15:6,0,244	0/1:22,5:28:13.98:14,0,281	0/0:26,0:23:38.81:0,39,330	1/1:9,5:16:23.76:135,24,0	1/1:9,6:16:19.82:129,20,0	1/1:3,14:21:18.54:242,19,0	0/0:21,2:24:11.45:0,11,259	0/0:18,0:19:28.33:0,28,224	0/0:23,3:26:16.73:0,17,289	0/0:24,0:25:26.65:0,27,201	1/1:7,13:22:44.49:279,44,0	1/1:6,9:13:14.68:103,15,0	1/1:2,4:4:11.88:81,12,0
chr10	86214048	.	TCTCTCTCTCTCTCCC	T	495.64	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=1.851;DP=393;FS=36.972;HRun=0;HaplotypeScore=110.4050;InbreedingCoeff=0.0501;MQ=42.43;MQ0=28;MQRankSum=-4.923;QD=3.08;ReadPosRankSum=-1.827;VQSLOD=0.3380;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:30.93:0,31,943	./.	0/0:17,0:4:6.02:0,6,75	0/0:34,0:3:5.99:0,6,49	0/0:15,0:14:12.03:0,12,358	0/0:22,0:20:17.81:0,18,282	0/0:10,0:9:21.07:0,21,490	0/1:28,0:28:89.55:171,0,90	0/0:6,0:6:6.01:0,6,87	0/1:15,0:9:68.53:122,0,69	0/0:3,0:2:0:0,0,0	0/0:7,0:6:6.01:0,6,205	0/0:6,0:5:5.76:0,6,46	0/0:9,0:7:12.51:0,13,252	0/0:5,0:5:6.01:0,6,81	0/0:11,0:9:9.01:0,9,379	0/1:5,0:5:5.45:14,0,5	0/0:10,0:9:2.59:0,3,10	0/1:17,0:15:32.27:32,0,101	1/1:13,11:21:3.01:47,3,0	0/1:37,0:28:77.74:78,0,147	0/0:11,0:9:6.02:0,6,146	0/0:9,0:9:12.03:0,12,181	0/0:19,0:19:22.04:0,22,642	0/0:12,0:12:21.07:0,21,685	0/1:16,0:14:70.63:71,0,253	1/1:3,0:2:4.57:57,5,0	0/1:16,0:13:41.98:42,0,505
chr10	86214084	.	CCT	C	689.13	PASS	AB=0.979;AC=17;AF=0.315;AN=54;BaseQRankSum=0.371;DP=401;FS=16.649;HRun=0;HaplotypeScore=41.5948;InbreedingCoeff=-0.0088;MQ=49.53;MQ0=32;MQRankSum=-1.908;QD=2.92;ReadPosRankSum=-2.075;VQSLOD=-0.1079;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:17:8.32:8,0,315	0/1:5,0:5:36.97:37,0,69	0/0:45,0:6:9:0,9,116	0/1:79,0:13:16.53:17,0,69	0/0:15,1:14:4.65:0,5,228	0/0:15,0:14:15.67:0,16,410	0/0:9,0:9:21.07:0,21,309	0/1:20,0:18:23.33:152,0,23	0/0:4,0:3:6.02:0,6,92	0/0:15,0:14:35.91:0,36,474	0/1:7,0:7:17.41:17,0,174	0/0:7,0:5:9.03:0,9,131	0/0:3,0:3:9.03:0,9,126	0/0:4,0:4:11.99:0,12,138	0/0:9,0:9:17.63:0,18,220	0/1:9,0:7:14.60:15,0,73	0/0:19,0:17:33.14:0,33,585	0/1:10,1:10:14.28:14,0,185	1/1:11,0:6:6.02:70,6,0	0/0:11,0:9:0:0,0,0	1/1:17,1:14:14.39:157,14,0	0/1:10,0:8:18.32:18,0,198	0/1:11,1:12:28.83:29,0,212	0/0:7,0:7:5.26:0,5,41	0/1:11,0:10:5.44:5,0,359	0/1:13,1:12:76.31:107,0,76	./.	1/1:11,0:11:20.95:203,21,0
chr10	86215278	.	G	GGTGT	4271.42	PASS	AB=1.000;AC=24;AF=0.444;AN=54;BaseQRankSum=10.920;DP=732;FS=1.374;HRun=0;HaplotypeScore=165.9477;InbreedingCoeff=0.8247;MQ=59.97;MQ0=6;MQRankSum=-8.819;QD=12.56;ReadPosRankSum=-7.440;VQSLOD=2.2457;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:62.84:0,63,663	1/1:9,0:12:14.97:188,15,0	./.	0/1:24,0:9:7.71:8,0,15	0/0:15,0:16:27.08:0,27,392	0/0:23,0:25:57.64:0,58,841	0/0:33,0:33:75.15:0,75,1119	1/1:19,0:17:9.02:117,9,0	0/0:25,0:26:57.17:0,57,854	1/1:23,0:24:35.95:494,36,0	1/1:19,0:18:9.03:156,9,0	0/0:26,0:27:54.55:0,55,825	0/0:22,0:25:32.51:0,33,593	0/0:29,0:29:60.19:0,60,896	0/0:16,0:16:30.07:0,30,433	0/0:24,0:26:48.16:0,48,755	1/1:15,0:15:15.02:210,15,0	0/1:41,0:41:44.76:502,0,45	1/1:30,0:29:33.11:440,33,0	1/1:21,0:25:27.05:441,27,0	1/1:45,1:44:6.46:50,6,0	0/0:20,0:22:30.07:0,30,397	0/0:20,0:24:45.04:0,45,668	0/0:30,0:31:75.23:0,75,1132	0/0:20,0:22:44.98:0,45,668	1/1:36,5:41:55.31:820,55,0	1/1:13,0:25:27.09:467,27,0	1/1:2,13:16:18.05:378,18,0
chr10	86215302	.	T	TGCGC	2499.94	PASS	AB=0.919;AC=17;AF=0.304;AN=56;BaseQRankSum=4.516;DP=661;FS=2.901;HRun=0;HaplotypeScore=169.0758;InbreedingCoeff=0.5969;MQ=52.62;MQ0=6;MQRankSum=-3.944;QD=8.93;ReadPosRankSum=4.137;VQSLOD=3.0804;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:47:99:134,0,158	1/1:9,0:12:8.83:54,9,0	0/0:7,0:3:5.84:0,6,40	0/0:15,0:5:2.98:0,3,21	0/0:14,0:14:33.11:0,33,532	0/0:24,0:24:57.19:0,57,920	0/0:35,0:34:66.20:0,66,1039	0/0:12,0:15:23.37:0,23,208	0/0:23,0:24:59.90:0,60,925	1/1:15,3:22:26.90:338,27,0	1/1:7,0:22:8.82:155,9,0	0/0:24,0:24:36.12:0,36,596	0/0:26,0:26:50.89:0,51,760	0/0:31,0:31:62.67:0,63,954	0/0:15,0:15:21.04:0,21,291	0/0:24,0:24:60.17:0,60,920	1/1:9,2:17:11.97:169,12,0	1/1:5,29:36:57.20:1415,57,0	0/0:20,0:20:21.85:0,22,236	1/1:17,0:19:11.57:71,12,0	0/1:34,0:35:0.03:1,0,0	0/0:18,0:18:39.12:0,39,554	0/0:18,0:18:30.09:0,30,470	0/0:36,0:35:75.24:0,75,1205	0/0:31,0:31:72.23:0,72,1133	0/1:28,0:30:99:113,0,347	0/1:19,0:19:41.33:94,0,41	0/1:15,0:15:1.78:140,0,2
chr10	86216420	.	TCGA	T	9984.81	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.676;DP=727;FS=4.667;HRun=0;HaplotypeScore=105.3998;InbreedingCoeff=0.9987;MQ=89.00;MQ0=0;MQRankSum=-5.709;QD=39.31;ReadPosRankSum=2.021;VQSLOD=6.1950;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,144,3197	1/1:0,6:6:18.06:294,18,0	0/0:36,0:36:93.32:0,93,2043	0/0:40,0:40:99:0,99,2069	0/0:31,0:31:90.31:0,90,1999	0/0:17,0:17:48.16:0,48,1045	0/0:36,0:36:90.31:0,90,2009	1/1:6,30:36:90.30:1443,90,0	0/0:25,0:25:75.26:0,75,1613	1/1:2,29:31:87.24:1369,87,0	1/1:0,20:20:48.16:784,48,0	0/0:24,0:24:63.22:0,63,1407	0/0:22,0:22:66.23:0,66,1451	0/0:25,0:25:69.24:0,69,1493	0/0:29,0:29:87.30:0,87,1916	0/0:12,0:12:36.12:0,36,802	1/1:5,36:41:93.32:1519,93,0	0/0:27,0:27:63.19:0,63,1330	1/1:3,15:18:48.16:765,48,0	1/1:4,10:14:30.10:490,30,0	1/1:2,28:30:72.25:1176,72,0	0/0:22,0:22:63.22:0,63,1374	0/0:19,0:19:54.19:0,54,1203	0/0:36,0:36:99:0,102,2207	0/0:18,0:18:45.15:0,45,1004	1/1:2,23:25:69.17:1068,69,0	1/1:5,15:20:36.12:587,36,0	1/1:1,12:13:30.10:490,30,0
chr10	86216795	.	A	AC	1322.25	PASS	AB=0.917;AC=9;AF=0.161;AN=56;BaseQRankSum=-7.055;DP=559;FS=0.577;HRun=8;HaplotypeScore=57.4900;InbreedingCoeff=0.8925;MQ=77.44;MQ0=0;MQRankSum=-1.884;QD=17.63;ReadPosRankSum=1.025;VQSLOD=3.4912;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.03:0,96,872	1/1:1,7:8:15.04:173,15,0	0/0:13,0:12:19.66:0,20,196	0/0:18,0:19:35.95:0,36,312	0/0:17,0:17:35.53:0,36,315	0/0:31,0:31:71.05:0,71,644	0/0:21,0:21:54:0,54,488	0/0:22,0:23:32.99:0,33,302	0/0:26,0:26:69.02:0,69,627	1/1:4,13:17:33.09:370,33,0	1/1:2,14:16:30.09:346,30,0	0/0:19,0:19:47.99:0,48,430	0/0:17,0:17:48.02:0,48,438	0/0:19,0:19:57.02:0,57,517	0/0:35,0:35:87.01:0,87,792	0/0:24,0:24:66.01:0,66,595	1/1:2,21:23:51.15:589,51,0	0/0:22,0:22:57.01:0,57,516	0/0:15,0:15:29.96:0,30,262	0/0:11,0:11:29.99:0,30,268	0/0:29,0:29:81.02:0,81,735	0/0:14,0:14:41.95:0,42,371	0/1:10,1:11:4.65:5,0,201	0/0:20,0:20:54.01:0,54,489	0/0:19,0:19:51.02:0,51,466	0/0:24,0:25:39.41:0,39,449	0/0:21,0:21:57.03:0,57,521	0/0:11,0:11:30.02:0,30,274
chr10	86217816	.	CT	C	1948.99	PASS	AB=0.935;AC=16;AF=0.286;AN=56;BaseQRankSum=6.896;DP=557;FS=1.856;HRun=11;HaplotypeScore=65.4814;InbreedingCoeff=0.8052;MQ=70.65;MQ0=0;MQRankSum=0.970;QD=12.34;ReadPosRankSum=-1.210;VQSLOD=3.2451;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,126,1278	0/0:6,0:6:18.03:0,18,184	0/1:11,0:11:9.28:9,0,70	0/0:13,1:11:5.04:0,5,55	0/0:24,2:26:32.46:0,32,523	0/1:16,3:20:7.35:7,0,298	0/0:20,0:20:51.13:0,51,544	1/1:8,11:19:8.45:262,8,0	0/0:21,0:22:53.94:0,54,542	0/0:22,1:23:14.45:0,14,354	0/0:11,0:11:17.99:0,18,167	0/0:19,0:19:42.98:0,43,443	0/0:15,0:15:39.06:0,39,398	0/0:20,0:21:50.86:0,51,488	0/0:31,0:34:78.01:0,78,795	0/0:15,0:18:27.59:0,28,386	0/0:31,1:32:56.50:0,57,777	0/0:26,1:27:38.48:0,38,593	1/1:3,13:17:37.92:294,38,0	1/1:5,12:18:37.95:301,38,0	1/1:4,14:18:47.83:383,48,0	0/0:11,0:12:26.16:0,26,282	0/0:9,0:11:23.68:0,24,276	0/0:17,0:17:45.09:0,45,466	0/0:21,1:22:20.41:0,20,394	1/1:8,12:20:34.24:273,34,0	1/1:3,27:30:59.91:493,60,0	1/1:0,5:5:14.98:123,15,0
chr10	86219735	.	GAT	G	6008.11	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.002;DP=556;FS=1.164;HRun=0;HaplotypeScore=64.3307;InbreedingCoeff=0.9990;MQ=89.87;MQ0=0;MQRankSum=-2.223;QD=42.01;ReadPosRankSum=0.919;VQSLOD=6.6136;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.28:0,81,1552	0/0:7,0:7:21.07:0,21,406	0/0:21,0:21:57.19:0,57,1066	0/0:25,0:25:72.21:0,72,1319	0/0:22,0:22:66.23:0,66,1275	0/0:25,0:25:72.25:0,72,1390	0/0:18,0:18:54.19:0,54,1042	1/1:1,21:22:63.20:918,63,0	0/0:16,0:16:45.15:0,45,869	0/0:13,0:13:39.13:0,39,754	0/0:18,0:18:54.19:0,54,1043	0/0:14,0:14:42.13:0,42,766	0/0:18,0:18:54.19:0,54,1020	0/0:22,0:22:66.20:0,66,1219	0/0:23,0:23:69.24:0,69,1333	0/0:23,0:23:69.22:0,69,1300	0/0:21,0:21:63.22:0,63,1205	0/0:17,0:17:48.16:0,48,895	1/1:0,19:19:57.18:850,57,0	1/1:0,14:14:42.10:617,42,0	1/1:0,31:31:90.31:1378,90,0	0/0:12,0:12:36.12:0,36,684	0/0:24,0:24:72.20:0,72,1320	0/0:30,0:29:90.28:0,90,1702	0/0:17,0:17:51.17:0,51,985	1/1:0,19:19:57.19:866,57,0	1/1:1,26:27:63.17:965,63,0	1/1:0,11:11:27.09:414,27,0
chr10	86221440	.	AT	A	329.38	PASS	AC=4;AF=0.087;AN=46;BaseQRankSum=4.266;DP=177;FS=0.000;HRun=2;HaplotypeScore=51.9292;InbreedingCoeff=0.4212;MQ=71.24;MQ0=6;MQRankSum=-2.309;QD=13.18;ReadPosRankSum=0.344;VQSLOD=2.3058;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:3.90:0,4,47	./.	0/0:15,0:5:8.92:0,9,106	0/0:38,0:14:14.67:0,15,110	0/0:6,0:6:18.03:0,18,230	0/0:8,0:8:24.08:0,24,340	0/0:1,0:1:3.01:0,3,45	0/0:18,0:17:21.62:0,22,228	0/0:4,0:4:10.26:0,10,118	1/1:1,0:1:3:28,3,0	./.	./.	0/0:2,0:2:6:0,6,69	0/0:2,0:2:3.01:0,3,40	0/0:1,0:1:3.01:0,3,45	0/0:1,0:1:3.01:0,3,45	1/1:20,4:23:47.27:404,47,0	0/0:18,0:18:50.92:0,51,681	0/0:4,0:3:5.79:0,6,29	./.	0/0:1,0:1:2.88:0,3,15	./.	0/0:3,0:3:9.02:0,9,109	0/0:2,0:2:6.02:0,6,90	0/0:6,0:6:18.06:0,18,270	0/0:2,0:2:0:0,0,0	0/0:4,0:4:9.80:0,10,85	0/0:10,0:10:22.19:0,22,141
chr10	86221441	.	T	TA	616.73	PASS	AB=1.000;AC=5;AF=0.109;AN=46;BaseQRankSum=3.704;DP=179;FS=1.792;HRun=1;HaplotypeScore=54.0133;InbreedingCoeff=0.2631;MQ=70.77;MQ0=6;MQRankSum=-3.998;QD=17.13;ReadPosRankSum=2.117;VQSLOD=4.0392;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:1,1:2:3.90:0,4,44	./.	0/0:15,0:5:8.92:0,9,95	0/0:40,0:14:20.35:0,20,147	0/0:6,0:6:18.03:0,18,218	0/0:9,0:9:24.08:0,24,321	0/0:1,0:1:3.01:0,3,42	0/0:18,0:17:4.77:0,5,220	0/0:4,0:4:10.26:0,10,112	1/1:1,0:1:3:28,3,0	./.	./.	0/0:2,0:2:6:0,6,66	0/0:2,0:2:3.01:0,3,40	0/0:1,0:1:3.01:0,3,42	0/0:1,0:1:3.01:0,3,41	1/1:10,15:24:48.12:687,48,0	0/0:18,0:18:50.76:0,51,621	0/0:4,0:3:8.86:0,9,57	./.	0/0:1,0:1:3:0,3,29	./.	0/0:3,0:3:9.02:0,9,105	0/0:2,0:2:6.02:0,6,83	0/0:6,0:6:18.06:0,18,252	0/0:2,0:2:2.84:0,3,14	0/0:4,0:4:1.08:0,1,48	0/1:10,0:10:10.21:10,0,78
chr10	86221445	.	AT	A	1280.58	PASS	AB=0.944;AC=15;AF=0.357;AN=42;BaseQRankSum=4.943;DP=173;FS=7.917;HRun=2;HaplotypeScore=48.6026;InbreedingCoeff=0.5691;MQ=59.62;MQ0=7;MQRankSum=-4.005;QD=15.24;ReadPosRankSum=2.390;VQSLOD=2.8937;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:3.90:0,4,42	./.	0/0:15,0:4:9.02:0,9,96	0/0:37,0:11:13.32:0,13,121	0/0:5,0:5:15.05:0,15,209	0/0:9,0:9:24.08:0,24,339	0/0:1,0:1:3.01:0,3,45	1/1:6,14:19:22.33:457,22,0	0/0:4,0:4:10.28:0,10,132	./.	./.	./.	0/0:2,0:2:6.01:0,6,65	./.	0/0:1,0:1:3.01:0,3,40	0/0:1,0:1:2.97:0,3,20	1/1:20,4:23:47.53:427,48,0	0/1:16,1:17:29.92:30,0,286	1/1:2,2:3:6.02:68,6,0	./.	1/1:0,1:1:3.01:38,3,0	0/0:1,0:1:3.01:0,3,44	./.	0/0:2,0:2:6.02:0,6,75	0/0:6,0:6:18.06:0,18,255	1/1:1,2:3:3.01:35,3,0	1/1:1,3:4:9.02:98,9,0	1/1:5,6:11:24.07:280,24,0
chr10	86221446	.	T	TA	1403.09	PASS	AB=0.857;AC=17;AF=0.405;AN=42;BaseQRankSum=5.241;DP=178;FS=6.538;HRun=1;HaplotypeScore=55.2191;InbreedingCoeff=0.5685;MQ=55.21;MQ0=7;MQRankSum=-4.037;QD=15.59;ReadPosRankSum=3.634;VQSLOD=3.5669;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:1,1:2:3.90:0,4,42	./.	0/0:15,0:4:9.02:0,9,106	0/0:36,0:10:12.33:0,12,118	0/0:5,0:5:15.05:0,15,203	0/0:9,0:9:24.08:0,24,323	0/0:1,0:1:3.01:0,3,42	1/1:20,0:19:10.81:363,11,0	0/0:5,0:5:10.28:0,10,127	./.	./.	./.	0/0:2,0:2:6.01:0,6,65	./.	0/0:1,0:1:3.01:0,3,40	1/1:0,0:1:1.25:3,1,0	1/1:11,12:25:47.75:691,48,0	0/1:15,1:18:53.68:54,0,259	1/1:6,0:5:6.88:42,7,0	./.	1/1:1,0:1:3.01:38,3,0	0/0:1,0:1:3.01:0,3,40	./.	0/0:2,0:2:5.23:0,5,49	0/0:6,0:6:18.06:0,18,246	1/1:4,0:4:2.98:22,3,0	1/1:3,0:3:9:85,9,0	1/1:11,0:11:24.02:255,24,0
chr10	86221451	.	TATA	T	855.87	PASS	AC=12;AF=0.316;AN=38;BaseQRankSum=2.501;DP=167;FS=4.661;HRun=0;HaplotypeScore=57.0953;InbreedingCoeff=0.6578;MQ=43.81;MQ0=8;MQRankSum=-3.386;QD=19.90;ReadPosRankSum=-0.674;VQSLOD=2.4110;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:0.47:1,0,0	./.	0/0:15,0:3:6.02:0,6,103	0/0:33,0:7:11.40:0,11,133	0/0:4,0:4:12.04:0,12,258	0/0:9,0:9:27.09:0,27,570	0/0:3,0:3:9.03:0,9,150	1/1:6,7:15:28.38:433,28,0	0/0:5,0:5:8.27:0,8,170	./.	./.	./.	0/0:1,0:1:3.01:0,3,72	./.	./.	0/0:1,0:1:3.01:0,3,52	0/0:24,0:24:48.16:0,48,922	0/0:17,0:17:33.11:0,33,560	1/1:4,2:5:3.81:97,4,0	./.	./.	0/0:1,0:1:3.01:0,3,72	./.	0/0:2,0:2:6.02:0,6,136	0/0:5,0:5:15.05:0,15,295	1/1:2,1:4:3.01:48,3,0	1/1:1,1:4:11.82:127,12,0	1/1:6,1:10:21.91:284,22,0
chr10	86221453	.	TA	T	666.50	PASS	AC=12;AF=0.316;AN=38;BaseQRankSum=3.594;DP=164;FS=3.095;HRun=1;HaplotypeScore=55.3427;InbreedingCoeff=0.6577;MQ=43.90;MQ0=8;MQRankSum=-3.894;QD=15.87;ReadPosRankSum=-1.229;VQSLOD=3.2505;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:0.47:1,0,0	./.	0/0:15,0:3:6.02:0,6,82	0/0:32,0:7:10.58:0,11,109	0/0:4,0:4:12.04:0,12,182	0/0:9,0:9:27.08:0,27,394	0/0:3,0:3:9.03:0,9,123	1/1:14,1:14:32.45:355,32,0	0/0:4,0:4:5.25:0,5,94	./.	./.	./.	0/0:1,0:1:3.01:0,3,48	./.	./.	0/0:1,0:1:3:0,3,26	0/0:24,0:24:48.11:0,48,692	0/0:18,0:18:33.07:0,33,387	1/1:6,0:5:5.82:78,6,0	./.	./.	0/0:1,0:1:3.01:0,3,48	./.	0/0:2,0:2:6.02:0,6,84	0/0:5,0:5:15.05:0,15,220	1/1:3,1:4:3.01:37,3,0	1/1:3,1:4:11.77:94,12,0	1/1:9,1:10:26.49:236,26,0
chr10	86221455	.	TA	T	562.58	PASS	AB=1.000;AC=11;AF=0.289;AN=38;BaseQRankSum=4.138;DP=162;FS=0.909;HRun=1;HaplotypeScore=53.5681;InbreedingCoeff=0.5335;MQ=43.89;MQ0=8;MQRankSum=-2.968;QD=14.06;ReadPosRankSum=-0.334;VQSLOD=2.5482;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:0.47:1,0,0	./.	0/0:15,0:3:6.02:0,6,66	0/0:30,0:7:7.57:0,8,81	0/0:4,0:4:12.04:0,12,182	0/0:7,0:7:21.07:0,21,332	0/0:3,0:3:9.03:0,9,123	1/1:11,4:14:29.94:321,30,0	0/0:4,0:4:5.25:0,5,94	./.	./.	./.	0/0:1,0:1:3.01:0,3,48	./.	./.	0/0:1,0:1:3:0,3,26	0/0:23,0:23:45.15:0,45,679	0/0:20,0:20:37.44:0,37,424	1/1:4,3:6:6.74:126,7,0	./.	./.	0/0:2,0:2:3.01:0,3,48	./.	0/0:2,0:2:6.02:0,6,84	0/0:6,0:6:18.05:0,18,245	1/1:3,1:4:2.70:34,3,0	0/1:4,0:4:4.34:41,0,4	1/1:5,2:7:6.17:164,6,0
chr10	86221463	.	TATAGTGTGTGTGTG	T	1775.15	PASS	AB=1.000;AC=11;AF=0.275;AN=40;BaseQRankSum=6.011;DP=170;FS=21.613;HRun=0;HaplotypeScore=75.8408;InbreedingCoeff=0.6273;MQ=45.08;MQ0=10;MQRankSum=-5.693;QD=32.87;ReadPosRankSum=1.873;VQSLOD=0.6014;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:5.33:0,5,313	./.	0/0:12,0:3:6.02:0,6,213	0/0:29,0:8:14.66:0,15,243	0/0:4,0:4:12.04:0,12,713	0/0:7,0:7:21.07:0,21,1452	0/0:4,0:4:12.04:0,12,583	1/1:12,0:11:26.93:386,27,0	0/0:6,0:6:8.36:0,8,462	./.	./.	0/0:3,0:3:6.02:0,6,261	0/0:3,0:3:6.02:0,6,390	./.	./.	0/0:4,0:4:6.02:0,6,259	0/1:21,0:21:99:380,0,247	0/0:19,0:19:45.09:0,45,1609	1/1:8,0:6:9.36:168,9,0	./.	./.	0/0:3,0:3:6.02:0,6,375	./.	0/0:4,0:4:12.04:0,12,622	0/0:5,0:5:15.05:0,15,825	1/1:3,1:4:6.02:235,6,0	1/1:2,1:3:5.98:236,6,0	1/1:4,2:6:14.94:515,15,0
chr10	86221465	.	TAGTGTGTGTGTG	T	1946.98	PASS	AB=1.000;AC=11;AF=0.275;AN=40;BaseQRankSum=6.302;DP=168;FS=20.623;HRun=0;HaplotypeScore=71.2631;InbreedingCoeff=0.6458;MQ=45.74;MQ0=10;MQRankSum=-6.410;QD=34.77;ReadPosRankSum=2.096;VQSLOD=1.2128;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:5.32:0,5,313	./.	0/0:13,0:4:8.95:0,9,305	0/0:23,0:8:11.71:0,12,369	0/0:5,0:5:15.05:0,15,815	0/0:7,0:7:21.07:0,21,1296	0/0:4,0:4:11.97:0,12,548	1/1:11,1:11:26.85:375,27,0	0/0:6,0:6:8.33:0,8,391	./.	./.	0/0:4,0:4:6.02:0,6,261	0/0:3,0:3:6.02:0,6,367	./.	./.	0/0:4,0:4:6.02:0,6,233	0/1:21,0:21:99:540,0,104	0/0:18,0:18:41.97:0,42,1442	1/1:10,0:6:14.89:180,15,0	./.	./.	0/0:3,0:3:6.02:0,6,355	./.	0/0:4,0:4:12.02:0,12,564	0/0:5,0:5:15.04:0,15,714	1/1:3,1:4:6.02:225,6,0	1/1:2,1:3:6.02:226,6,0	1/1:5,1:6:15.05:546,15,0
chr10	86221466	.	AG	A	182.64	PASS	AB=0.848;AC=9;AF=0.225;AN=40;BaseQRankSum=6.570;DP=167;FS=8.508;HRun=1;HaplotypeScore=54.3369;InbreedingCoeff=0.3682;MQ=46.04;MQ0=10;MQRankSum=-4.072;QD=3.65;ReadPosRankSum=2.744;VQSLOD=-0.0043;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:5.99:0,6,51	./.	0/0:13,0:4:7.57:0,8,87	0/0:21,0:7:11.76:0,12,125	0/0:6,0:6:18.05:0,18,257	0/0:7,0:7:21.07:0,21,335	0/1:5,0:5:0.57:1,0,169	0/1:11,2:11:2.08:2,0,110	0/0:5,1:6:9.03:0,9,137	./.	./.	0/0:4,0:4:3.01:0,3,48	0/0:3,0:3:6.02:0,6,96	./.	./.	0/0:4,0:4:2.99:0,3,23	0/1:10,9:19:29.78:192,0,30	0/0:17,0:18:14.79:0,15,312	0/0:8,1:6:4.74:0,5,66	./.	./.	0/0:3,0:3:6.02:0,6,95	./.	0/0:4,0:4:11.63:0,12,151	0/0:5,0:5:15.05:0,15,225	1/1:3,1:4:5.44:24,5,0	1/1:3,0:3:5.47:25,5,0	1/1:4,2:6:13.37:56,13,0
chr10	86221468	.	TGTGTGTGTG	T	1041.56	PASS	AB=0.842;AC=9;AF=0.214;AN=42;BaseQRankSum=6.449;DP=174;FS=17.385;HRun=0;HaplotypeScore=70.7666;InbreedingCoeff=0.3396;MQ=46.76;MQ0=10;MQRankSum=-4.621;QD=19.29;ReadPosRankSum=2.810;VQSLOD=0.6584;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:5.99:0,6,267	./.	0/0:11,0:4:6.02:0,6,244	0/0:22,0:9:17.73:0,18,603	0/0:6,0:6:18.06:0,18,821	0/0:7,0:7:21.07:0,21,1034	0/0:6,0:6:15.52:0,16,638	0/1:11,2:11:99:113,0,140	0/0:6,0:6:9.03:0,9,342	./.	./.	0/0:5,0:5:6.02:0,6,237	0/0:3,0:3:6.02:0,6,304	./.	./.	0/0:6,0:6:9.03:0,9,351	0/1:13,6:19:99:417,0,150	0/0:18,0:18:36.66:0,37,1228	0/1:8,0:6:37.84:38,0,63	./.	./.	0/0:3,0:3:6.02:0,6,301	0/0:2,0:2:3.01:0,3,145	0/0:4,0:4:12.01:0,12,478	0/0:7,0:7:21.07:0,21,902	1/1:3,1:4:6.02:136,6,0	1/1:3,0:3:6.02:136,6,0	1/1:4,2:6:15.05:333,15,0
chr10	86226616	.	C	CT	5125.84	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-13.921;DP=760;FS=4.513;HRun=8;HaplotypeScore=72.0848;InbreedingCoeff=0.9961;MQ=81.67;MQ0=0;MQRankSum=-1.086;QD=26.15;ReadPosRankSum=-2.815;VQSLOD=4.5700;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,1087	0/0:10,0:10:26.98:0,27,240	0/0:22,0:22:43.54:0,44,449	0/0:21,0:21:14.13:0,14,327	0/0:39,0:39:99:0,99,906	0/0:29,0:29:72.02:0,72,655	0/0:36,0:36:83.70:0,84,768	1/1:13,22:35:66.20:761,66,0	0/0:23,0:23:66.02:0,66,599	0/0:35,0:35:90.04:0,90,824	0/0:18,0:18:48.01:0,48,439	0/0:24,0:24:60.02:0,60,549	0/0:24,0:24:63.02:0,63,576	0/0:23,0:23:57.03:0,57,521	0/0:32,0:32:68.99:0,69,627	0/0:27,0:27:69.02:0,69,631	0/0:40,0:40:99:0,102,918	0/0:24,0:24:60.02:0,60,549	1/1:7,25:32:47.73:792,48,0	1/1:3,22:25:69.12:766,69,0	1/1:4,32:36:93.28:1073,93,0	0/0:20,0:20:54.03:0,54,494	0/0:22,0:22:60.03:0,60,549	0/0:32,0:32:78.03:0,78,714	0/0:20,0:20:48:0,48,431	1/1:4,24:28:38.73:700,39,0	1/1:1,23:24:63.18:722,63,0	1/1:6,9:16:27.08:312,27,0
chr10	86226905	.	G	GT	4337.87	PASS	AB=0.609;AC=13;AF=0.232;AN=56;BaseQRankSum=15.059;DP=665;FS=2.110;HRun=3;HaplotypeScore=79.5242;InbreedingCoeff=0.9040;MQ=80.76;MQ0=0;MQRankSum=-0.249;QD=25.37;ReadPosRankSum=-1.116;VQSLOD=3.7918;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:65:99:0,183,2255	0/0:11,0:11:33.10:0,33,396	0/0:24,0:24:62.21:0,62,661	0/0:10,0:10:27.08:0,27,318	0/0:30,0:30:84.19:0,84,958	0/0:28,0:28:81.25:0,81,970	0/0:31,0:31:78.24:0,78,936	1/1:14,16:30:69.15:797,69,0	0/0:17,0:17:42.09:0,42,478	0/0:24,0:24:72.20:0,72,844	0/0:18,0:18:54.17:0,54,647	0/0:28,0:28:84.26:0,84,1007	0/0:19,0:19:54.16:0,54,643	0/0:21,0:21:63.19:0,63,755	0/0:15,0:15:45.14:0,45,540	0/0:16,0:16:48.15:0,48,575	0/0:28,0:28:84.26:0,84,1007	0/0:24,0:24:66.20:0,66,791	1/1:5,20:25:38.48:719,38,0	1/1:4,17:21:50.71:635,51,0	1/1:2,13:15:26.64:336,27,0	0/0:24,0:24:72.21:0,72,853	0/0:18,0:18:51.02:0,51,591	0/0:24,0:23:66.20:0,66,792	0/0:19,0:19:54.16:0,54,648	1/1:4,38:42:20.27:1094,20,0	1/1:8,16:24:42.72:626,43,0	0/1:5,9:14:12.48:131,0,12
chr10	86226908	.	TC	T	2307.90	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.823;DP=674;FS=0.712;HRun=1;HaplotypeScore=84.1047;InbreedingCoeff=0.9556;MQ=81.67;MQ0=0;MQRankSum=-2.403;QD=13.42;ReadPosRankSum=-2.474;VQSLOD=1.7069;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:65:99:0,184,2788	0/0:11,0:11:33.11:0,33,482	0/0:23,0:23:65.87:0,66,799	0/0:13,0:13:30.02:0,30,368	0/0:29,0:29:84.24:0,84,1183	0/0:29,0:29:84.19:0,84,1128	0/0:29,0:29:87.27:0,87,1227	1/1:28,3:31:80.88:561,81,0	0/0:18,0:18:54.09:0,54,687	0/0:25,0:25:75.22:0,75,1047	0/0:20,0:20:56.70:0,57,775	0/0:28,0:28:84.24:0,84,1170	0/0:20,0:20:57.19:0,57,827	0/0:21,0:21:63.18:0,63,880	0/0:16,0:16:48.15:0,48,683	0/0:16,0:16:48.16:0,48,702	0/0:30,0:30:90.22:0,90,1233	0/0:23,0:23:66.18:0,66,924	1/1:25,0:25:56.76:397,57,0	1/1:23,0:23:62.10:367,62,0	1/1:15,0:15:32.23:200,32,0	0/0:24,0:24:72.23:0,72,1031	0/0:18,0:18:53.83:0,54,735	0/0:24,0:23:69.23:0,69,1005	0/0:20,0:20:60.19:0,60,856	1/1:41,0:41:13.22:543,13,0	1/1:23,1:24:57.22:377,57,0	1/1:13,0:13:1.61:53,2,0
chr10	86227959	.	T	TC	344.09	PASS	AB=0.942;AC=4;AF=0.071;AN=56;BaseQRankSum=-3.867;DP=686;FS=7.604;HRun=9;HaplotypeScore=78.4817;InbreedingCoeff=0.4275;MQ=73.14;MQ0=0;MQRankSum=-1.454;QD=5.64;ReadPosRankSum=-2.622;VQSLOD=0.4237;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:85.96:0,86,811	0/0:15,0:15:8.38:0,8,99	0/0:15,0:13:14.22:0,14,147	0/0:17,0:17:6.49:0,6,108	0/0:28,0:28:68.96:0,69,598	0/0:15,0:15:41.99:0,42,364	0/0:27,0:27:74.94:0,75,641	0/1:20,3:23:8.47:8,0,146	0/0:27,0:27:71.93:0,72,611	0/0:24,0:24:19.60:0,20,111	0/1:20,0:20:49.19:49,0,80	0/0:30,0:30:77.95:0,78,672	0/0:10,0:10:26.99:0,27,234	0/0:25,0:26:49.97:0,50,422	0/0:27,0:28:64.96:0,65,546	0/0:20,0:21:53.01:0,53,449	0/0:29,0:29:64.01:0,64,266	1/1:3,15:18:36.10:398,36,0	0/0:15,0:15:41.01:0,41,342	0/0:37,0:37:82.96:0,83,754	0/0:46,0:46:99:0,117,998	0/0:34,0:34:24.18:0,24,585	0/0:36,0:36:71.88:0,72,628	0/0:23,0:23:59.90:0,60,505	0/0:20,1:21:24.68:0,25,434	0/0:27,0:27:74.92:0,75,643	0/0:23,0:22:62.95:0,63,541	0/0:12,0:12:23.98:0,24,208
chr10	86228791	.	GCACAATA	G	1638.51	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.564;DP=535;FS=0.000;HRun=0;HaplotypeScore=125.1978;InbreedingCoeff=0.9468;MQ=70.40;MQ0=1;MQRankSum=-7.914;QD=31.51;ReadPosRankSum=0.286;VQSLOD=3.3032;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.30:0,87,3125	1/1:5,4:9:9.03:216,9,0	0/0:24,0:22:39.65:0,40,1305	0/0:25,0:21:39.06:0,39,1103	0/0:21,0:21:54.19:0,54,2050	0/0:16,0:16:42.14:0,42,1532	0/0:22,0:21:51.17:0,51,1600	0/0:30,0:30:72.22:0,72,2412	0/0:16,0:16:42.14:0,42,1412	1/1:3,13:16:39.08:884,39,0	1/1:2,5:7:6.02:144,6,0	0/0:12,0:12:27.56:0,28,1028	0/0:14,0:14:36.12:0,36,1302	0/0:17,0:17:48.16:0,48,1652	0/0:19,0:19:45.15:0,45,1492	0/0:15,0:15:45.14:0,45,1508	1/1:2,18:20:24.08:542,24,0	0/0:18,0:18:48.16:0,48,1802	0/0:22,0:21:51.17:0,51,1626	0/0:20,0:20:48.16:0,48,1696	0/0:21,0:21:45.15:0,45,1521	0/0:9,0:9:24.08:0,24,913	0/0:9,0:9:15.04:0,15,339	0/0:47,0:47:99:0,114,3789	0/0:22,0:22:51.17:0,51,1778	0/0:23,0:23:58.43:0,58,2034	0/0:11,0:11:27.09:0,27,1025	0/0:17,0:17:45.14:0,45,1619
chr10	86229525	.	TG	T	2546.68	PASS	AB=0.814;AC=14;AF=0.250;AN=56;BaseQRankSum=5.166;DP=604;FS=17.316;HRun=10;HaplotypeScore=69.7034;InbreedingCoeff=0.7412;MQ=68.50;MQ0=0;MQRankSum=-1.182;QD=13.99;ReadPosRankSum=-0.977;VQSLOD=1.8658;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:41:15.87:0,16,111	0/0:10,0:10:1.21:0,1,162	0/0:12,1:14:4.22:0,4,226	0/0:14,0:14:23.81:0,24,205	0/1:12,1:13:5:5,0,177	0/0:20,0:20:33.08:0,33,357	0/0:25,0:25:57.15:0,57,630	1/1:10,25:35:2.38:475,2,0	0/0:12,0:12:27.04:0,27,279	0/0:21,0:21:36.08:0,36,385	0/0:12,0:12:24.06:0,24,258	0/0:16,0:16:24.04:0,24,250	0/0:11,0:12:30.05:0,30,315	0/0:17,1:18:13.11:0,13,348	0/0:21,0:21:39.07:0,39,406	0/0:17,0:17:42.10:0,42,456	0/0:47,0:47:96.20:0,96,1020	0/0:27,0:26:54.14:0,54,590	1/1:11,12:23:44.94:382,45,0	0/1:7,6:14:1.80:112,0,2	1/1:9,29:38:83.96:725,84,0	0/0:21,1:22:4.02:0,4,262	0/0:15,0:15:26.62:0,27,284	0/0:40,3:43:47.06:0,47,933	0/0:15,0:15:21.93:0,22,225	1/1:12,16:28:23.81:434,24,0	1/1:7,13:20:47.97:412,48,0	1/1:5,6:11:20.99:182,21,0
chr10	86229649	.	GGTTT	G	2445.85	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.562;DP=633;FS=4.193;HRun=0;HaplotypeScore=122.9520;InbreedingCoeff=0.9663;MQ=67.31;MQ0=3;MQRankSum=3.326;QD=21.08;ReadPosRankSum=2.766;VQSLOD=3.4529;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:60.16:0,60,1374	1/1:3,13:16:26.56:427,27,0	0/0:27,0:23:15.05:0,15,314	0/0:22,0:21:18.06:0,18,420	0/0:21,0:21:33.11:0,33,786	1/1:9,13:22:33.11:522,33,0	0/0:23,0:23:36.12:0,36,852	0/0:37,0:36:31.52:0,32,491	0/0:13,0:13:21.07:0,21,501	1/1:13,15:26:36.12:569,36,0	1/1:5,8:13:24.08:380,24,0	0/0:27,0:27:57.20:0,57,1335	0/0:18,0:18:39.13:0,39,885	0/0:15,0:15:30.10:0,30,712	0/0:26,0:26:69.22:0,69,1577	0/0:14,0:14:30.09:0,30,669	1/1:14,23:37:11.32:720,11,0	0/0:18,0:18:36.12:0,36,859	0/0:21,0:20:21.04:0,21,296	0/0:15,0:15:30.10:0,30,505	0/0:26,0:26:10.40:0,10,120	0/0:24,0:24:54.18:0,54,1246	0/0:4,0:13:21.54:0,22,374	0/0:40,1:41:30.76:0,31,1682	0/0:25,0:25:33.11:0,33,787	0/0:22,0:22:36.59:0,37,584	0/0:19,0:19:15.05:0,15,252	0/0:11,0:11:18.06:0,18,304
chr10	86229662	.	G	GTTTGTTTGT	8571.52	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-11.330;DP=685;FS=3.956;HRun=0;HaplotypeScore=182.6769;InbreedingCoeff=0.9073;MQ=58.22;MQ0=5;MQRankSum=-5.751;QD=47.36;ReadPosRankSum=-2.099;VQSLOD=4.1091;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:78.22:0,78,1708	0/0:18,0:18:35.94:0,36,703	0/0:32,0:23:51.16:0,51,712	0/0:28,0:26:65.56:0,66,989	0/0:23,0:23:57.17:0,57,1198	0/0:19,0:19:39.13:0,39,795	0/0:25,0:25:57.18:0,57,1164	1/1:25,0:36:81.24:1179,81,0	0/0:13,0:13:33.10:0,33,742	0/0:31,0:29:75.24:0,75,1238	0/0:13,0:14:33.11:0,33,637	0/0:34,0:34:99:0,99,2017	0/0:18,0:18:54.18:0,54,1125	0/0:10,0:10:30.10:0,30,859	0/0:31,0:31:81.27:0,81,1964	0/0:17,0:17:45.13:0,45,959	0/0:33,0:33:65.24:0,65,1235	0/0:24,0:24:34.70:0,35,1221	1/1:5,16:23:57.17:1366,57,0	1/1:0,17:21:45.11:1574,45,0	1/1:11,0:21:42.14:741,42,0	0/0:30,0:30:87.26:0,87,1864	0/1:18,0:18:17.43:17,0,250	0/0:47,0:47:99:0,112,2408	0/0:20,0:20:57.19:0,57,1221	1/1:1,23:25:61.65:2135,62,0	1/1:4,14:23:18.06:714,18,0	1/1:2,10:12:18.06:845,18,0
chr10	86229670	.	G	GT	1375.22	PASS	AB=0.917;AC=8;AF=0.143;AN=56;BaseQRankSum=5.313;DP=704;FS=6.869;HRun=3;HaplotypeScore=104.1172;InbreedingCoeff=0.1210;MQ=58.10;MQ0=5;MQRankSum=-9.602;QD=8.49;ReadPosRankSum=2.332;VQSLOD=0.8475;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:84.26:0,84,1006	0/0:18,0:18:40.07:0,40,299	0/0:38,0:27:69.21:0,69,826	0/0:30,0:28:67.77:0,68,842	0/0:20,0:20:60.17:0,60,708	0/0:17,0:17:39.80:0,40,255	0/0:25,0:25:69.21:0,69,827	0/1:20,15:34:99:541,0,441	0/0:15,0:15:39.09:0,39,443	0/0:33,0:31:81.80:0,82,737	0/0:14,0:14:37.43:0,37,287	0/0:40,0:40:99:0,117,1376	0/0:19,0:19:57.17:0,57,683	0/0:13,0:13:39.12:0,39,466	0/0:31,0:31:87.27:0,87,1044	0/0:17,0:17:51.16:0,51,611	0/0:36,0:37:80.84:0,81,615	0/0:22,0:22:55.57:0,56,682	0/1:25,0:24:99:293,0,252	0/1:23,0:23:99:138,0,221	0/1:18,6:24:99:222,0,288	0/0:33,0:33:93.27:0,93,1104	0/0:20,0:20:29.46:0,29,385	0/0:48,0:48:99:0,126,1485	0/0:19,0:19:57.17:0,57,684	0/1:24,0:24:99:176,0,246	0/1:21,0:21:26.72:58,0,27	1/1:10,0:10:17.25:88,17,0
chr10	86231892	.	A	AG	5897.30	PASS	AB=1.000;AC=21;AF=0.389;AN=54;BaseQRankSum=14.535;DP=680;FS=11.440;HRun=2;HaplotypeScore=115.8367;InbreedingCoeff=0.9151;MQ=53.05;MQ0=12;MQRankSum=-13.268;QD=26.45;ReadPosRankSum=-4.781;VQSLOD=2.4064;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1486	1/1:0,9:9:15.52:217,16,0	0/0:26,0:5:12.03:0,12,129	./.	0/0:32,0:30:80.94:0,81,990	0/0:20,0:20:60.19:0,60,744	0/0:35,0:35:96.30:0,96,1190	1/1:28,0:25:62.98:549,63,0	0/0:30,0:30:90.28:0,90,1116	1/1:1,32:33:93.31:1330,93,0	1/1:1,13:14:27.09:388,27,0	0/0:32,0:32:92.81:0,93,1125	0/0:20,0:20:60.19:0,60,742	0/0:15,0:15:45.14:0,45,558	0/0:21,0:21:60.16:0,60,731	0/0:20,0:20:60.19:0,60,744	1/1:1,11:12:33.11:475,33,0	0/0:23,1:24:63.20:0,63,781	1/1:14,0:13:32.92:275,33,0	1/1:23,0:23:66.04:619,66,0	1/1:19,0:17:36.07:356,36,0	0/0:21,0:21:54.14:0,54,656	0/0:29,0:29:71.77:0,72,892	0/0:38,0:38:99:0,111,1361	0/0:27,0:27:75.24:0,75,930	1/1:33,1:34:98.90:882,99,0	1/1:24,0:24:63.09:603,63,0	0/1:13,0:13:99:204,0,104
chr10	86231893	.	G	GA	7304.53	PASS	AB=0.591;AC=21;AF=0.389;AN=54;BaseQRankSum=16.744;DP=688;FS=9.638;HRun=1;HaplotypeScore=113.4508;InbreedingCoeff=0.9150;MQ=52.78;MQ0=12;MQRankSum=-13.450;QD=31.22;ReadPosRankSum=-4.561;VQSLOD=2.4562;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1701	1/1:10,0:10:15.16:96,15,0	0/0:26,0:5:12.03:0,12,140	./.	0/0:32,0:30:80.89:0,81,1130	0/0:20,0:20:60.20:0,60,839	0/0:35,0:35:99:0,102,1382	1/1:7,25:29:63.21:1006,63,0	0/0:30,0:30:90.30:0,90,1257	1/1:33,0:33:72.96:651,73,0	1/1:15,0:14:26.66:196,27,0	0/0:32,0:32:92.86:0,93,1297	0/0:20,0:20:60.20:0,60,835	0/0:15,0:15:45.15:0,45,629	0/0:20,0:20:60.20:0,60,837	0/0:20,0:20:60.20:0,60,839	1/1:13,0:13:32.35:209,32,0	0/0:24,0:24:63.21:0,63,881	1/1:2,12:13:36.12:561,36,0	1/1:2,23:25:66.22:1052,66,0	1/1:2,18:18:36.12:574,36,0	0/0:22,0:22:53.83:0,54,754	0/0:28,0:28:74.79:0,75,1030	0/0:39,0:39:99:0,114,1570	0/0:25,0:25:75.25:0,75,1049	1/1:2,33:35:99:1563,102,0	1/1:0,24:24:63.21:1005,63,0	0/1:4,9:13:99:392,0,128
chr10	86232056	.	GTTGTTGTTA	G	4353.70	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=16.848;DP=787;FS=4.045;HRun=0;HaplotypeScore=230.6545;InbreedingCoeff=0.7470;MQ=60.21;MQ0=2;MQRankSum=-12.025;QD=16.01;ReadPosRankSum=0.706;VQSLOD=3.7519;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,144,5855	1/1:3,12:15:29.98:726,30,0	0/0:43,0:37:75.21:0,75,2106	0/0:27,0:24:53.67:0,54,1621	0/0:33,0:33:84.24:0,84,3297	0/0:16,0:16:45.14:0,45,1797	0/0:35,0:35:78.19:0,78,2691	0/1:32,0:32:35.25:154,0,35	0/0:29,0:29:84.25:0,84,3715	1/1:2,20:22:54.10:1218,54,0	1/1:6,10:16:39.05:989,39,0	0/0:31,0:31:72.23:0,72,3065	0/0:33,0:33:93.29:0,93,3796	0/0:27,0:27:72.23:0,72,2978	0/0:37,0:37:99:0,105,3652	0/0:24,0:24:66.21:0,66,2954	1/1:5,23:27:20.99:528,21,0	0/0:22,0:22:63.19:0,63,2579	0/1:13,0:13:17.68:18,0,64	1/1:33,0:33:44.47:266,44,0	1/1:37,0:37:17.91:70,18,0	0/0:25,0:25:69.21:0,69,2735	0/0:26,0:26:63.18:0,63,2198	0/0:33,0:33:93.32:0,93,4020	0/0:18,0:18:48.15:0,48,2153	0/1:33,0:33:26.92:171,0,27	1/1:31,0:31:43.97:152,44,0	1/1:12,0:12:7.41:61,7,0
chr10	86232059	.	GTTGTTA	G	8585.85	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=17.346;DP=783;FS=1.428;HRun=0;HaplotypeScore=167.8735;InbreedingCoeff=0.9984;MQ=60.62;MQ0=2;MQRankSum=-11.877;QD=32.04;ReadPosRankSum=-0.571;VQSLOD=4.2785;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,144,4436	1/1:14,0:14:27:367,27,0	0/0:40,0:35:78.71:0,79,1821	0/0:29,0:26:62.67:0,63,1393	0/0:31,0:31:84.24:0,84,2493	0/0:16,0:16:48.11:0,48,1339	0/0:35,0:35:87.13:0,87,2099	1/1:5,26:31:74.90:1069,75,0	0/0:31,0:31:90.19:0,90,2806	1/1:22,0:22:54.08:687,54,0	1/1:13,0:13:39.03:524,39,0	0/0:30,0:30:78.20:0,78,2303	0/0:33,0:33:93.27:0,93,2796	0/0:28,0:28:78.21:0,78,2322	0/0:38,0:38:99:0,108,2738	0/0:24,0:24:66.21:0,66,2220	1/1:26,0:25:20.98:275,21,0	0/0:22,0:22:63.19:0,63,1891	1/1:10,4:14:26.57:434,27,0	1/1:2,32:34:92.69:1700,93,0	1/1:4,34:38:21:431,21,0	0/0:28,0:28:80.73:0,81,2112	0/0:26,0:26:66.10:0,66,1616	0/0:34,0:34:99:0,99,3033	0/0:16,0:16:48.15:0,48,1600	1/1:3,30:33:74.90:1206,75,0	1/1:2,29:31:54.66:1235,55,0	1/1:2,10:12:30.10:658,30,0
chr10	86233576	.	GACT	G	1225.53	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.760;DP=749;FS=9.247;HRun=0;HaplotypeScore=108.3573;InbreedingCoeff=0.9995;MQ=85.74;MQ0=0;MQRankSum=-4.854;QD=32.25;ReadPosRankSum=2.270;VQSLOD=3.9330;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,33:38:99:1320,105,0	0/0:14,0:14:42.14:0,42,1034	0/0:23,0:23:69.24:0,69,1608	0/0:25,0:25:61.57:0,62,1532	0/0:42,0:42:99:0,117,2824	0/0:27,0:27:81.26:0,81,1892	0/0:19,0:19:57.20:0,57,1405	0/0:35,0:35:99:0,105,2529	0/0:34,0:34:99:0,102,2440	0/0:33,0:33:99:0,99,2351	0/0:23,0:23:66.23:0,66,1601	0/0:17,0:17:51.18:0,51,1252	0/0:27,0:27:81.26:0,81,1947	0/0:24,0:24:72.25:0,72,1747	0/0:23,0:23:69.24:0,69,1701	0/0:31,0:31:93.31:0,93,2244	0/0:33,0:33:99:0,99,2405	0/0:24,0:24:69.24:0,69,1701	0/0:22,0:22:66.23:0,66,1592	0/0:31,0:31:93.31:0,93,2154	0/0:37,0:37:99:0,111,2703	0/0:22,0:22:66.23:0,66,1617	0/0:26,0:26:75.26:0,75,1816	0/0:21,0:21:60.21:0,60,1425	0/0:29,0:29:87.30:0,87,2091	0/0:31,0:31:93.32:0,93,2251	0/0:28,0:27:84.29:0,84,2012	0/0:10,0:10:30.10:0,30,740
chr10	86233580	.	GA	G	748.10	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.704;DP=761;FS=11.116;HRun=1;HaplotypeScore=80.0802;InbreedingCoeff=0.9999;MQ=85.79;MQ0=0;MQRankSum=-4.629;QD=19.69;ReadPosRankSum=2.666;VQSLOD=2.8102;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,33:38:99:843,102,0	0/0:15,0:15:45.15:0,45,715	0/0:23,0:23:66.22:0,66,1051	0/0:26,0:26:74.41:0,74,1120	0/0:41,0:41:99:0,114,1822	0/0:25,0:25:75.26:0,75,1195	0/0:20,0:20:60.20:0,60,956	0/0:36,0:36:99:0,105,1656	0/0:35,0:35:99:0,105,1679	0/0:32,0:32:96.33:0,96,1525	0/0:23,0:23:66.21:0,66,1031	0/0:18,0:18:54.16:0,54,817	0/0:27,0:27:81.28:0,81,1291	0/0:25,0:25:75.26:0,75,1196	0/0:24,0:24:72.22:0,72,1126	0/0:31,0:31:93.30:0,93,1462	0/0:33,0:33:96.33:0,96,1535	0/0:24,0:24:72.25:0,72,1151	0/0:27,0:27:81.21:0,81,1239	0/0:28,0:28:84.27:0,84,1310	0/0:37,0:37:99:0,111,1769	0/0:23,0:23:69.22:0,69,1076	0/0:25,0:25:72.25:0,72,1146	0/0:25,0:25:69.22:0,69,1067	0/0:29,0:29:87.30:0,87,1386	0/0:32,0:32:93.31:0,93,1467	0/0:27,0:26:81.25:0,81,1252	0/0:12,0:12:36.09:0,36,529
chr10	86236204	.	T	TAA	1284.28	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.406;DP=597;FS=2.651;HRun=9;HaplotypeScore=72.6771;InbreedingCoeff=0.9980;MQ=71.67;MQ0=0;MQRankSum=0.417;QD=24.70;ReadPosRankSum=1.101;VQSLOD=3.4118;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:34:83.77:1247,84,0	0/0:12,0:12:27.04:0,27,287	0/0:18,0:18:30.88:0,31,310	0/0:15,0:13:25.40:0,25,225	0/0:31,0:31:32.24:0,32,749	0/0:23,0:23:60.13:0,60,630	0/0:21,0:21:34.34:0,34,514	0/0:33,0:32:78.13:0,78,824	0/0:23,0:23:63.13:0,63,662	0/0:27,0:27:68.90:0,69,714	0/0:15,0:15:42.05:0,42,434	0/0:16,0:16:39.06:0,39,407	0/0:15,0:15:45.11:0,45,479	0/0:18,0:19:44.80:0,45,451	0/0:13,0:13:36.06:0,36,375	0/0:14,0:14:42.07:0,42,429	0/0:20,0:20:45.07:0,45,470	1/1:1,0:18:42.91:159,43,0	0/0:24,0:24:63.12:0,63,662	0/0:29,0:29:78.13:0,78,812	0/0:22,0:22:60.11:0,60,630	0/0:18,0:18:42.07:0,42,437	0/0:23,0:23:63.12:0,63,663	0/0:15,0:15:42.10:0,42,447	0/0:26,0:26:66.15:0,66,702	0/0:31,0:32:78.13:0,78,878	0/0:22,0:22:54.12:0,54,574	0/0:17,0:17:51.13:0,51,543
chr10	86239026	.	C	CA	4688.98	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-13.164;DP=722;FS=0.732;HRun=7;HaplotypeScore=69.1240;InbreedingCoeff=0.9637;MQ=66.32;MQ0=3;MQRankSum=0.050;QD=30.06;ReadPosRankSum=-1.320;VQSLOD=4.8003;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:99:0,135,1303	0/0:8,0:8:24.04:0,24,232	0/0:41,0:33:77.62:0,78,672	0/0:29,0:21:15.82:0,16,301	0/0:19,0:19:51.08:0,51,492	0/0:22,0:22:60.08:0,60,573	0/0:16,0:16:36.05:0,36,347	1/1:4,26:30:77.73:873,78,0	0/0:28,0:28:78.11:0,78,747	0/0:22,0:21:57.09:0,57,550	0/0:19,0:19:57.07:0,57,539	0/0:20,0:20:51.07:0,51,492	0/0:17,0:17:48.06:0,48,458	0/0:18,0:18:51.07:0,51,487	0/0:33,0:33:96.15:0,96,927	0/0:38,0:38:99:0,102,978	0/0:24,0:24:66.10:0,66,637	0/0:33,0:33:87.14:0,87,840	1/1:5,17:22:56.44:686,56,0	1/1:4,31:35:87.22:1032,87,0	1/1:4,14:18:39.12:471,39,0	0/0:27,0:27:72.11:0,72,695	0/0:34,0:34:96.15:0,96,927	0/0:25,0:25:69.06:0,69,656	0/0:41,0:41:99:0,99,948	1/1:2,15:17:19.15:503,19,0	1/1:0,32:32:90.28:1087,90,0	1/1:0,2:2:3.01:36,3,0
chr10	86239832	.	TA	T	402.33	PASS	AB=0.857;AC=3;AF=0.054;AN=56;BaseQRankSum=6.309;DP=519;FS=0.897;HRun=8;HaplotypeScore=48.9292;InbreedingCoeff=0.5785;MQ=67.32;MQ0=0;MQRankSum=0.296;QD=14.90;ReadPosRankSum=2.157;VQSLOD=3.2732;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.13:0,51,592	0/0:5,0:5:15.05:0,15,181	0/0:11,0:11:23.45:0,23,229	0/0:3,0:3:2.90:0,3,16	0/0:27,0:27:66.14:0,66,767	0/0:16,0:16:48.15:0,48,580	0/0:14,0:14:36.08:0,36,410	0/0:41,0:41:99:0,102,1187	0/0:11,0:11:33.09:0,33,389	0/0:17,0:17:45.14:0,45,544	0/0:32,0:32:96.17:0,96,1110	0/0:11,0:11:30.09:0,30,362	0/0:11,0:11:33.08:0,33,379	0/0:9,0:9:24.06:0,24,277	0/0:21,0:21:54.16:0,54,643	0/0:20,0:20:57.15:0,57,667	0/0:22,0:22:60.16:0,60,710	1/1:1,20:21:51.08:492,51,0	0/0:23,0:23:63.18:0,63,750	0/0:31,0:31:90.27:0,90,1077	0/0:14,0:14:39.12:0,39,471	0/0:24,0:24:57.12:0,57,661	0/0:24,0:24:63.19:0,63,761	0/1:5,1:6:13.93:14,0,130	0/0:20,0:20:57.14:0,57,657	0/0:23,0:23:63.18:0,63,742	0/0:24,0:24:66.19:0,66,786	0/0:21,0:21:63.19:0,63,761
chr10	86239954	.	A	AT	2139.75	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-8.647;DP=513;FS=1.658;HRun=6;HaplotypeScore=48.6514;InbreedingCoeff=0.9729;MQ=66.41;MQ0=0;MQRankSum=-0.090;QD=30.57;ReadPosRankSum=1.095;VQSLOD=4.1611;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.12:0,51,520	1/1:0,6:6:15.05:189,15,0	0/0:12,0:11:17.71:0,18,159	0/0:10,0:10:20.05:0,20,180	0/0:19,0:19:57.11:0,57,574	0/0:21,0:21:60.12:0,60,605	0/0:14,0:14:33.06:0,33,330	0/0:32,0:32:90.20:0,90,913	0/0:15,0:15:45.10:0,45,459	1/1:2,26:28:75.24:943,75,0	1/1:1,16:17:48.11:586,48,0	0/0:13,0:13:36.06:0,36,361	0/0:14,0:14:36.08:0,36,367	0/0:6,0:6:12.01:0,12,117	0/0:24,0:24:69.14:0,69,697	0/0:16,0:16:42.05:0,42,413	1/1:2,17:19:48.13:580,48,0	0/0:27,0:27:69.15:0,69,703	0/0:24,0:24:63.14:0,63,643	0/0:29,0:29:81.18:0,81,826	0/0:17,0:17:45.06:0,45,444	0/0:5,0:5:12.03:0,12,122	0/0:21,0:21:51.09:0,51,513	0/0:17,0:17:48.11:0,48,490	0/0:18,0:18:51.11:0,51,520	0/0:20,1:21:19.02:0,19,471	0/0:25,0:25:63.12:0,63,634	0/0:26,0:26:72.14:0,72,726
chr10	86240438	.	CAG	C	1001.79	PASS	AB=0.974;AC=10;AF=0.179;AN=56;BaseQRankSum=9.753;DP=646;FS=2.467;HRun=0;HaplotypeScore=98.9973;InbreedingCoeff=0.2480;MQ=73.40;MQ0=11;MQRankSum=-1.231;QD=5.93;ReadPosRankSum=0.379;VQSLOD=3.1266;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,20:28:42.13:509,42,0	0/0:7,0:7:18.06:0,18,290	0/0:44,0:21:17.07:0,17,195	0/0:51,0:31:4.70:0,5,237	0/0:26,1:27:29.84:0,30,976	0/0:16,0:16:45.12:0,45,675	0/0:38,1:39:62.92:0,63,1448	0/0:25,0:25:36.91:0,37,369	0/0:24,1:25:23.79:0,24,828	0/0:21,0:20:40.14:0,40,715	0/0:17,0:17:42.14:0,42,674	0/0:15,0:15:12.85:0,13,507	0/0:15,0:15:42.13:0,42,651	0/0:16,1:18:8.74:0,9,583	0/0:33,1:34:50.90:0,51,1314	0/0:19,1:19:42.13:0,42,641	0/0:40,1:41:65.91:0,66,1474	1/1:4,16:20:39.60:505,40,0	0/1:20,0:20:10.06:10,0,94	0/1:19,1:20:33.58:34,0,37	0/0:34,0:32:9.01:0,9,106	0/0:8,0:8:12.04:0,12,194	0/0:13,0:13:30.08:0,30,448	0/1:25,1:25:6.59:7,0,829	0/1:12,1:12:3.31:3,0,399	0/1:22,0:22:41.39:41,0,178	0/1:20,0:20:22.77:41,0,23	0/0:7,0:7:2.92:0,3,17
chr10	86240450	.	GAGAGAGACAGAGAC	G	4067.57	PASS	AB=0.528;AC=11;AF=0.204;AN=54;BaseQRankSum=9.523;DP=645;FS=1.114;HRun=0;HaplotypeScore=213.4375;InbreedingCoeff=0.8027;MQ=63.32;MQ0=18;MQRankSum=-3.322;QD=38.74;ReadPosRankSum=-2.528;VQSLOD=2.7977;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:57.20:0,57,2435	0/0:6,0:6:18.06:0,18,1030	0/0:46,0:17:20.19:0,20,200	0/0:54,0:27:13.60:0,14,319	0/0:25,0:25:63.13:0,63,3179	0/0:18,0:18:54.19:0,54,2739	0/0:39,0:39:84.25:0,84,3730	1/1:6,23:27:66.16:1295,66,0	0/0:22,0:22:60.15:0,60,2900	0/0:21,0:20:56.54:0,57,2464	0/0:16,0:16:42.13:0,42,2025	0/0:14,0:14:39.13:0,39,1905	0/0:14,0:14:39.10:0,39,2153	0/0:20,0:20:51.16:0,51,2458	0/0:33,0:33:84.25:0,84,4192	0/0:21,0:20:39.13:0,39,1765	0/0:39,0:39:96.31:0,96,5569	0/0:21,0:21:42.17:0,42,1878	1/1:5,7:12:21.03:510,21,0	1/1:3,16:19:6.02:166,6,0	./.	0/0:5,0:5:12.04:0,12,572	0/0:15,0:15:39.13:0,39,1902	0/0:26,0:24:66.20:0,66,3550	0/0:13,0:12:27.09:0,27,1454	0/1:2,17:19:99:1230,0,179	1/1:4,16:20:20.45:815,20,0	1/1:6,0:6:3.01:52,3,0
chr10	86240460	.	GAGAC	G	1594.10	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=11.355;DP=649;FS=1.834;HRun=0;HaplotypeScore=117.3150;InbreedingCoeff=0.8101;MQ=61.46;MQ0=19;MQRankSum=-4.290;QD=17.14;ReadPosRankSum=-1.723;VQSLOD=2.8408;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:69.17:0,69,1304	0/0:7,0:7:21.07:0,21,546	0/0:41,0:16:18.29:0,18,290	0/0:62,1:28:39.21:0,39,682	0/0:23,0:23:63.13:0,63,1532	0/0:20,0:20:60.21:0,60,1536	0/0:36,0:36:93.28:0,93,2226	1/1:25,0:23:55.99:722,56,0	0/0:23,0:23:69.18:0,69,1589	0/0:22,0:22:66.13:0,66,1464	0/0:17,0:17:48.15:0,48,1157	0/0:14,0:14:39.13:0,39,998	0/0:17,0:17:48.13:0,48,1101	0/0:21,0:21:57.18:0,57,1344	0/0:34,0:34:96.29:0,96,2274	0/0:17,0:16:39.13:0,39,1003	0/0:44,0:44:99:0,111,2816	0/0:26,0:26:64.52:0,65,1259	1/1:9,0:8:19.84:202,20,0	1/1:17,0:17:6.02:75,6,0	./.	0/0:6,0:6:15.05:0,15,369	0/0:16,0:16:39.13:0,39,1006	0/0:26,0:24:72.22:0,72,1725	0/0:14,0:13:36.12:0,36,876	0/1:19,0:19:54.03:487,0,54	1/1:16,0:16:20.44:218,20,0	1/1:0,7:7:3.01:54,3,0
chr10	86240666	.	A	AAT	5675.48	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.270;DP=632;FS=2.862;HRun=0;HaplotypeScore=74.7037;InbreedingCoeff=0.9937;MQ=84.42;MQ0=0;MQRankSum=-0.773;QD=46.14;ReadPosRankSum=1.864;VQSLOD=6.3884;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:51.17:966,51,0	1/1:0,5:5:12.04:227,12,0	0/0:19,0:19:50.69:0,51,662	0/0:21,0:21:51.71:0,52,661	0/0:31,0:31:81.22:0,81,1137	0/0:22,0:22:63.20:0,63,933	0/0:25,0:25:72.22:0,72,1049	0/0:24,0:24:63.15:0,63,874	0/0:23,0:23:66.21:0,66,978	1/1:1,25:27:78.20:1320,78,0	1/1:3,16:19:39.05:700,39,0	0/0:20,0:20:54.18:0,54,817	0/0:20,0:20:60.17:0,60,846	0/0:16,0:16:48.14:0,48,688	0/0:38,0:38:99:0,111,1620	0/0:24,0:24:69.23:0,69,1042	1/1:1,24:26:75.17:1381,75,0	1/1:0,22:22:57.20:1081,57,0	0/0:21,0:21:63.18:0,63,911	0/0:41,0:41:99:0,117,1713	0/0:14,0:14:36.11:0,36,526	0/0:21,0:21:60.20:0,60,906	0/0:16,0:16:45.15:0,45,681	0/0:21,0:21:60.19:0,60,888	0/0:16,0:16:48.15:0,48,708	0/0:32,0:32:87.29:0,87,1298	0/0:27,0:27:72.23:0,72,1069	0/0:17,0:17:48.16:0,48,726
chr10	86240936	.	T	TAA	1088.97	PASS	AB=0.917;AC=4;AF=0.071;AN=56;BaseQRankSum=0.750;DP=618;FS=22.112;HRun=10;HaplotypeScore=84.1294;InbreedingCoeff=0.6405;MQ=65.62;MQ0=1;MQRankSum=-0.759;QD=18.78;ReadPosRankSum=-3.700;VQSLOD=-0.0410;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,29:43:98.13:1165,98,0	0/0:12,0:12:27.05:0,27,275	0/1:8,1:9:29.92:30,0,44	0/1:5,0:5:0:0,0,0	0/0:35,0:35:78.13:0,78,793	0/0:25,0:24:63.11:0,63,641	0/0:19,0:21:47.58:0,48,522	0/0:30,0:30:72.10:0,72,722	0/0:23,0:23:60.09:0,60,603	0/0:29,0:29:63.09:0,63,641	0/0:21,0:21:41.94:0,42,427	0/0:27,0:28:65.83:0,66,639	0/0:15,0:15:39.07:0,39,397	0/0:22,0:23:62.82:0,63,613	0/0:24,0:24:60.10:0,60,604	0/0:22,0:23:41.73:0,42,463	0/0:29,0:29:81.16:0,81,824	0/0:2,0:21:46.63:0,47,202	0/0:15,0:15:42.07:0,42,427	0/0:24,0:24:62.07:0,62,639	0/0:13,0:13:36.08:0,36,366	0/0:18,0:18:45.09:0,45,457	0/0:22,0:24:45.57:0,46,499	0/0:23,0:24:65.87:0,66,653	0/0:19,0:19:54.11:0,54,549	0/0:24,0:24:60.12:0,60,610	0/0:28,0:28:70.42:0,70,726	0/0:10,0:11:29.80:0,30,287
chr10	86241005	.	GA	G	746.42	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=8.535;DP=634;FS=2.893;HRun=1;HaplotypeScore=67.6401;InbreedingCoeff=0.6475;MQ=80.66;MQ0=0;MQRankSum=-4.621;QD=12.87;ReadPosRankSum=0.745;VQSLOD=2.5362;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:79.12:142,0,79	0/0:11,0:11:30.05:0,30,404	0/0:23,0:23:54.13:0,54,722	0/0:21,0:21:40.85:0,41,606	0/0:16,0:15:45.14:0,45,653	0/0:25,0:24:72.15:0,72,952	0/0:22,0:22:66.21:0,66,965	0/0:28,0:28:75.20:0,75,1008	0/0:20,0:20:60.18:0,60,856	0/0:28,0:28:84.25:0,84,1204	0/0:14,0:14:42.13:0,42,604	0/0:20,0:20:60.18:0,60,858	0/0:19,0:19:54.15:0,54,760	0/0:25,0:25:75.21:0,75,1062	0/0:29,0:29:87.29:0,87,1294	0/0:27,0:27:81.27:0,81,1210	0/0:28,0:28:84.21:0,84,1181	1/1:0,20:20:51.17:711,51,0	0/0:22,0:22:66.18:0,66,917	0/0:23,0:23:69.19:0,69,971	0/0:24,0:24:69.21:0,69,1033	0/0:17,0:17:51.16:0,51,743	0/0:25,0:25:75.19:0,75,1056	0/0:16,0:16:48.16:0,48,717	0/0:22,0:22:66.20:0,66,955	0/0:34,0:34:99:0,99,1463	0/0:14,0:14:42.02:0,42,579	0/0:23,0:23:69.14:0,69,925
chr10	86241006	.	AG	A	865.21	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.411;DP=630;FS=3.848;HRun=6;HaplotypeScore=67.1392;InbreedingCoeff=0.9988;MQ=80.80;MQ0=0;MQRankSum=-1.519;QD=15.45;ReadPosRankSum=0.255;VQSLOD=3.4253;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,29:36:66.15:708,66,0	0/0:11,0:11:24.08:0,24,316	0/0:23,0:23:49.96:0,50,572	0/0:21,0:21:41.55:0,42,546	0/0:16,0:15:42.14:0,42,551	0/0:25,0:24:60.20:0,60,788	0/0:22,0:22:63.20:0,63,827	0/0:27,0:27:72.18:0,72,914	0/0:21,0:21:57.17:0,57,735	0/0:27,0:27:78.25:0,78,1022	0/0:14,0:14:39.13:0,39,507	0/0:20,0:20:54.16:0,54,696	0/0:19,0:19:51.16:0,51,651	0/0:25,0:25:66.21:0,66,865	0/0:29,0:29:87.27:0,87,1131	0/0:27,0:27:81.26:0,81,1066	0/0:27,0:27:78.25:0,78,1024	1/1:20,0:20:49.41:279,49,0	0/0:22,0:22:57.19:0,57,749	0/0:24,0:24:63.18:0,63,800	0/0:24,0:24:71.72:0,72,917	0/0:17,0:17:51.17:0,51,670	0/0:25,0:25:69.21:0,69,889	0/0:16,0:16:48.15:0,48,618	0/0:22,0:22:63.20:0,63,829	0/0:32,0:32:96.28:0,96,1231	0/0:15,0:15:39.12:0,39,499	0/0:23,0:23:63.20:0,63,827
chr10	86241560	.	CGAGAGAGAGAGAGAGAGAGAGAGAGA	C	1356.94	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=4.978;DP=524;FS=40.002;HRun=0;HaplotypeScore=286.6454;InbreedingCoeff=0.5362;MQ=74.81;MQ0=16;MQRankSum=-2.505;QD=14.91;ReadPosRankSum=-0.898;VQSLOD=1.2790;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:6.41:0,6,388	0/0:4,0:4:9.03:0,9,194	0/0:57,0:31:0.94:0,1,2	0/0:76,0:28:3.48:0,3,67	0/0:25,0:25:18.95:0,19,1252	0/0:20,0:20:12.04:0,12,669	0/0:20,0:20:27.09:0,27,1609	1/1:25,0:25:6.01:80,6,0	0/0:12,0:12:9.03:0,9,671	0/0:15,0:15:15.05:0,15,284	0/0:10,0:10:12.02:0,12,170	0/0:16,0:16:9.03:0,9,536	0/0:8,0:8:9.03:0,9,645	0/0:10,0:10:15.05:0,15,1093	0/0:17,0:17:6.49:0,6,510	0/0:14,0:14:21.06:0,21,1243	0/1:21,0:20:37.80:38,0,163	0/0:13,0:12:21.07:0,21,1534	0/0:13,0:13:4.07:0,4,12	1/1:13,1:14:3:201,3,0	./.	0/0:16,0:16:6.02:0,6,281	0/0:10,0:10:3.01:0,3,66	0/0:23,0:23:30.10:0,30,1600	0/0:15,0:15:18.05:0,18,1378	1/1:10,2:13:9.03:583,9,0	1/1:11,2:13:9.03:583,9,0	1/1:4,0:4:2.88:15,3,0
chr10	86243994	.	CGT	C	587.96	PASS	AB=0.959;AC=23;AF=0.460;AN=50;BaseQRankSum=4.624;DP=659;FS=12.023;HRun=0;HaplotypeScore=83.3686;InbreedingCoeff=0.3486;MQ=62.05;MQ0=4;MQRankSum=-1.015;QD=1.68;ReadPosRankSum=1.769;VQSLOD=0.6518;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:42,2:44:8.98:85,9,0	1/1:4,1:6:5.85:46,6,0	0/0:34,0:16:0.47:0,0,1	./.	0/1:16,1:17:14.21:14,0,151	0/0:13,0:13:6.02:0,6,85	0/1:30,1:32:34.32:34,0,78	./.	0/0:23,0:24:24.06:0,24,307	0/0:23,0:24:9.02:0,9,114	./.	0/1:21,1:21:8.15:8,0,265	0/1:19,1:21:14.19:14,0,166	0/0:12,0:12:2.79:0,3,43	0/0:31,0:31:30.06:0,30,414	0/0:21,1:22:0.83:0,1,365	1/1:25,5:30:11.95:129,12,0	0/0:20,0:20:18.04:0,18,218	1/1:13,1:15:6.01:58,6,0	1/1:14,3:17:9.02:97,9,0	1/1:44,6:50:5.97:64,6,0	0/0:17,0:16:9.03:0,9,130	0/0:18,0:17:0:0,0,0	0/1:39,0:39:11.17:11,0,244	0/0:21,0:21:18.05:0,18,243	1/1:15,1:16:3:32,3,0	1/1:18,3:20:5.81:64,6,0	1/1:15,3:20:11.70:92,12,0
chr10	86244301	.	T	TC	500.91	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=1.837;DP=368;FS=6.324;HRun=1;HaplotypeScore=64.1232;InbreedingCoeff=0.8547;MQ=46.27;MQ0=11;MQRankSum=2.034;QD=8.35;ReadPosRankSum=-1.030;VQSLOD=0.4020;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:26.79:0,27,180	1/1:9,0:9:20.87:171,21,0	./.	./.	0/0:20,0:20:41.64:0,42,543	0/0:11,0:11:24.08:0,24,311	0/0:8,0:8:21.07:0,21,272	0/0:17,0:16:11.58:0,12,182	0/0:14,0:14:30.10:0,30,389	1/1:16,0:16:37.86:325,38,0	1/1:2,14:15:14.66:110,15,0	0/0:8,0:8:21.07:0,21,272	0/0:8,0:8:18.06:0,18,230	0/0:11,0:11:9.03:0,9,115	0/0:15,0:15:30.10:0,30,389	0/0:13,0:12:21.07:0,21,271	1/1:10,9:18:0.45:38,0,0	0/0:16,0:16:35.26:0,35,233	0/0:9,0:9:7.21:0,7,45	0/0:11,0:10:25.86:0,26,153	0/0:11,0:10:12.58:0,13,54	0/0:11,0:11:24.05:0,24,282	0/0:14,0:14:30.09:0,30,378	0/0:17,0:16:27.02:0,27,346	0/0:11,0:11:18.06:0,18,231	0/0:23,0:22:53.83:0,54,289	0/0:11,0:11:26.75:0,27,140	0/0:15,0:13:34.30:0,34,201
chr10	86244758	.	G	GC	6019.67	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-12.606;DP=605;FS=10.066;HRun=2;HaplotypeScore=60.9900;InbreedingCoeff=0.9981;MQ=88.28;MQ0=0;MQRankSum=-1.402;QD=37.86;ReadPosRankSum=-0.600;VQSLOD=4.5848;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,153,1895	0/0:7,0:7:21.07:0,21,260	0/0:20,0:20:54.17:0,54,663	0/0:24,0:24:60.12:0,60,691	0/0:13,0:13:36.07:0,36,429	0/0:11,0:11:30.09:0,30,372	0/0:30,0:30:87.27:0,87,1078	1/1:2,19:21:57.19:821,57,0	0/0:10,0:10:30.09:0,30,372	0/0:18,0:18:48.15:0,48,591	0/0:8,0:7:21.07:0,21,260	0/0:25,0:25:75.24:0,75,929	0/0:16,0:16:45.14:0,45,554	0/0:13,0:13:39.12:0,39,483	0/0:29,0:28:75.21:0,75,905	0/0:28,0:28:84.26:0,84,1041	0/0:45,0:45:99:0,126,1562	0/0:23,0:23:66.16:0,66,799	1/1:0,18:18:54.17:752,54,0	1/1:0,12:12:27.09:388,27,0	1/1:1,40:41:99:1469,102,0	0/0:14,0:14:42.12:0,42,507	0/0:16,0:16:42.13:0,42,521	0/0:31,0:31:87.27:0,87,1078	0/0:13,0:13:36.11:0,36,446	1/1:2,27:28:47.08:1125,47,0	1/1:2,15:17:42.14:602,42,0	1/1:0,21:21:60.20:863,60,0
chr10	86249490	.	C	CGG	4110.82	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.590;DP=768;FS=5.603;HRun=2;HaplotypeScore=88.7697;InbreedingCoeff=0.9974;MQ=85.22;MQ0=0;MQRankSum=-0.695;QD=49.53;ReadPosRankSum=-0.146;VQSLOD=3.1024;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,1801	1/1:2,9:11:27.09:502,27,0	0/0:19,0:19:51.14:0,51,708	0/0:29,0:29:52.39:0,52,990	0/0:21,0:21:57.15:0,57,815	0/0:26,0:26:78.26:0,78,1144	0/0:35,0:35:99:0,99,1454	0/0:14,0:14:39.13:0,39,571	0/0:41,0:41:99:0,111,1627	1/1:3,21:24:66.17:1137,66,0	1/1:0,22:22:63.22:1179,63,0	0/0:40,0:40:99:0,114,1593	0/0:20,0:20:54.17:0,54,775	0/0:32,0:32:96.31:0,96,1393	0/0:39,0:39:99:0,111,1632	0/0:31,0:31:84.25:0,84,1210	1/1:0,26:26:69.24:1292,69,0	0/0:20,0:20:60.20:0,60,880	0/0:23,0:23:69.23:0,69,1013	0/0:28,0:28:72.24:0,72,1060	0/0:61,0:61:99:0,175,2493	0/0:26,0:26:78.26:0,78,1148	0/0:19,0:19:51.17:0,51,747	0/0:30,0:30:84.27:0,84,1216	0/0:27,0:27:75.25:0,75,1100	0/0:33,1:34:40.10:0,40,1288	0/0:21,0:21:63.21:0,63,925	0/0:6,0:6:18.06:0,18,265
chr10	86250984	.	TAA	T	3040.49	PASS	AB=0.580;AC=14;AF=0.250;AN=56;BaseQRankSum=8.987;DP=578;FS=5.456;HRun=12;HaplotypeScore=99.0620;InbreedingCoeff=0.7994;MQ=63.56;MQ0=0;MQRankSum=-3.716;QD=18.65;ReadPosRankSum=-1.647;VQSLOD=2.6547;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,3:39:18.87:0,19,225	0/1:1,1:9:7.55:8,0,47	0/0:13,0:14:17.47:0,17,169	0/0:5,0:5:6.87:0,7,63	0/0:31,0:31:75.24:0,75,1095	0/0:22,0:22:51.07:0,51,688	0/0:9,0:10:26.55:0,27,329	1/1:5,18:23:14.24:468,14,0	0/0:12,0:15:43.60:0,44,538	0/0:7,1:29:17.89:0,18,144	0/0:5,2:32:32.35:0,32,179	0/0:19,0:19:51.16:0,51,739	0/0:19,0:20:57.16:0,57,796	0/0:17,0:17:48.14:0,48,671	0/0:15,0:15:42.14:0,42,626	0/0:21,0:22:59.66:0,60,803	0/0:6,0:33:55.91:0,56,245	0/0:8,0:21:38.99:0,39,359	1/1:5,18:23:56.74:534,57,0	1/1:9,20:29:57:569,57,0	1/1:4,8:12:21.01:214,21,0	0/0:17,0:18:32.60:0,33,455	0/0:19,0:20:60.15:0,60,852	0/0:16,0:16:39.13:0,39,582	0/0:14,0:17:50.13:0,50,653	1/1:2,27:31:77.61:822,78,0	1/1:4,19:23:45.04:458,45,0	0/1:5,7:12:22.39:159,0,22
chr10	86251763	.	C	CACACACACACACAT	4771.36	PASS	AB=0.926;AC=12;AF=0.214;AN=56;BaseQRankSum=1.575;DP=653;FS=14.510;HRun=0;HaplotypeScore=247.2150;InbreedingCoeff=0.4768;MQ=50.84;MQ0=19;MQRankSum=-6.634;QD=22.30;ReadPosRankSum=-1.418;VQSLOD=2.3201;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:27.69:0,28,205	0/0:11,0:11:2.06:0,2,128	0/0:25,0:15:11.20:0,11,64	0/0:35,0:16:19.59:0,20,155	0/0:24,0:22:35.65:0,36,621	0/0:26,0:26:38.53:0,39,678	0/0:24,0:24:56.22:0,56,883	0/1:41,0:41:1.80:699,0,2	0/0:19,0:19:36.05:0,36,964	0/1:17,0:17:25.28:25,0,249	0/0:11,0:11:17.99:0,18,186	0/0:30,0:30:65.44:0,65,906	0/0:14,0:14:34.91:0,35,594	0/0:22,0:22:50.93:0,51,642	0/0:27,0:26:36.11:0,36,909	0/0:23,0:23:53.90:0,54,1068	0/0:32,0:30:29.12:0,29,440	0/1:14,0:13:99:306,0,114	1/1:18,0:17:23.34:513,23,0	0/1:24,0:24:6.94:665,0,7	1/1:45,0:44:13.10:541,13,0	0/0:14,0:14:29.97:0,30,320	0/0:19,0:19:36.69:0,37,616	0/0:36,0:36:63.53:0,64,1429	0/0:13,0:13:36.02:0,36,630	1/1:30,0:27:65.01:1026,65,0	0/1:3,10:14:3.03:198,0,3	0/1:10,0:10:4.69:797,0,5
chr10	86251968	.	GAC	G	5750.95	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.427;DP=725;FS=0.716;HRun=0;HaplotypeScore=87.3285;InbreedingCoeff=0.9994;MQ=91.77;MQ0=1;MQRankSum=-3.556;QD=35.72;ReadPosRankSum=0.986;VQSLOD=7.1005;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,2507	0/0:12,0:12:36.12:0,36,647	0/0:30,0:30:81.26:0,81,1382	0/0:31,0:31:83.77:0,84,1401	0/0:16,0:16:45.15:0,45,809	0/0:16,0:16:45.13:0,45,779	0/0:25,0:25:63.22:0,63,1134	1/1:2,30:32:87.24:1138,87,0	0/0:36,0:36:99:0,105,1820	0/0:24,0:24:72.20:0,72,1252	0/0:13,0:13:30.10:0,30,540	0/0:32,0:32:93.31:0,93,1639	0/0:22,0:22:66.23:0,66,1187	0/0:31,0:31:93.30:0,93,1643	0/0:42,0:42:99:0,114,2046	0/0:31,0:31:87.28:0,87,1523	0/0:46,0:46:99:0,129,2285	0/0:22,0:22:54.19:0,54,972	1/1:1,10:11:30.10:419,30,0	1/1:0,13:13:36.12:504,36,0	1/1:3,42:45:99:1638,117,0	0/0:19,0:19:51.14:0,51,856	0/0:15,0:15:45.15:0,45,794	0/0:40,0:40:99:0,120,2153	0/0:13,0:13:39.12:0,39,673	1/1:2,20:22:60.11:795,60,0	1/1:0,24:24:66.22:922,66,0	1/1:2,12:13:24.08:336,24,0
chr10	86252641	.	TG	T	6339.48	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=7.708;DP=639;FS=8.758;HRun=9;HaplotypeScore=70.1996;InbreedingCoeff=0.9938;MQ=90.72;MQ0=0;MQRankSum=-6.236;QD=21.71;ReadPosRankSum=2.067;VQSLOD=5.5594;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,38:41:99:933,102,0	1/1:1,6:7:14.95:128,15,0	0/0:30,0:30:43.12:0,43,518	0/0:24,0:24:49.25:0,49,442	0/0:14,0:14:31.88:0,32,331	0/0:22,1:23:32.72:0,33,630	0/0:23,0:23:60.18:0,60,692	1/1:3,21:24:60.03:549,60,0	0/0:29,0:29:72.15:0,72,777	1/1:3,23:26:68.98:624,69,0	1/1:5,19:24:25.41:484,25,0	0/0:19,0:19:44.94:0,45,478	0/0:29,0:29:69.18:0,69,778	0/0:19,1:20:20.68:0,21,491	0/0:30,1:31:47.73:0,48,775	0/0:27,0:27:54.29:0,54,799	1/1:1,17:18:45.02:412,45,0	1/1:1,10:12:32.05:281,32,0	1/1:4,15:19:44.95:398,45,0	1/1:2,14:16:41.98:377,42,0	1/1:7,36:43:99:906,99,0	0/0:18,1:19:19.49:0,19,462	0/0:18,0:18:44.99:0,45,489	0/0:25,0:24:63.16:0,63,707	0/0:16,0:16:33.10:0,33,381	1/1:8,27:35:83.98:755,84,0	1/1:2,17:19:39.01:357,39,0	1/1:2,6:8:15.01:137,15,0
chr10	86253337	.	GT	G	829.54	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=8.879;DP=525;FS=1.233;HRun=9;HaplotypeScore=87.7433;InbreedingCoeff=0.6800;MQ=79.50;MQ0=3;MQRankSum=-5.195;QD=13.38;ReadPosRankSum=0.933;VQSLOD=3.7092;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:59.97:538,60,0	0/0:6,0:6:1.88:0,2,24	0/0:44,0:33:25.98:0,26,533	0/0:46,0:29:20.19:0,20,382	0/0:22,1:23:38.47:0,38,660	0/0:14,1:15:17.67:0,18,444	0/0:15,0:15:27.08:0,27,310	0/0:31,1:32:49.95:0,50,784	0/0:15,0:15:36.11:0,36,415	0/1:21,0:21:5.04:5,0,22	0/0:16,0:16:7.85:0,8,97	0/0:8,0:8:21.05:0,21,229	0/0:9,0:9:21.05:0,21,232	0/0:9,0:9:24.07:0,24,277	0/0:17,0:17:51.14:0,51,579	0/0:13,0:13:33.10:0,33,380	0/0:12,0:11:4.26:0,4,54	1/1:4,14:18:45.01:411,45,0	0/0:24,0:24:59.99:0,60,654	0/0:21,0:21:57.16:0,57,649	0/0:9,0:9:24.07:0,24,277	0/0:21,0:21:54.14:0,54,606	0/0:14,0:14:39.02:0,39,413	0/0:11,0:11:23.66:0,24,297	0/0:13,0:13:39.10:0,39,436	0/0:32,0:32:80.44:0,80,915	0/0:18,0:18:42.12:0,42,484	0/0:18,0:18:42.12:0,42,484
chr10	86253344	.	TTTG	T	1821.66	PASS	AB=0.833;AC=8;AF=0.143;AN=56;BaseQRankSum=6.537;DP=536;FS=0.000;HRun=0;HaplotypeScore=106.6653;InbreedingCoeff=0.6914;MQ=76.44;MQ0=4;MQRankSum=-5.668;QD=16.56;ReadPosRankSum=-2.304;VQSLOD=2.5052;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:67.92:0,68,570	0/1:3,3:6:43.85:182,0,44	0/0:50,0:34:25.66:0,26,481	0/1:48,0:28:20.79:21,0,269	0/0:23,0:23:63.19:0,63,1200	0/0:17,0:17:51.16:0,51,958	0/0:10,0:10:18.06:0,18,344	0/0:31,0:31:81.25:0,81,1466	0/0:13,0:13:36.11:0,36,696	1/1:8,15:23:66.17:884,66,0	1/1:11,8:19:48.08:600,48,0	0/0:8,0:8:21.05:0,21,371	0/0:8,0:8:21.06:0,21,389	0/0:10,0:10:27.09:0,27,537	0/0:19,0:19:57.16:0,57,1073	0/0:12,0:12:33.09:0,33,608	1/1:7,6:12:11.12:285,11,0	0/0:19,0:20:53.43:0,53,446	0/0:26,0:25:66.20:0,66,1216	0/0:23,0:23:63.20:0,63,1241	0/0:9,0:9:27.07:0,27,515	0/0:21,0:21:48.16:0,48,988	0/0:13,0:13:24.07:0,24,433	0/0:11,0:11:25.89:0,26,474	0/0:14,0:14:39.12:0,39,768	0/0:31,1:32:45.75:0,46,1658	0/0:16,0:16:42.12:0,42,828	0/0:16,0:16:44.98:0,45,839
chr10	86253345	.	TTG	T	754.47	PASS	AB=0.929;AC=6;AF=0.107;AN=56;BaseQRankSum=9.289;DP=544;FS=1.087;HRun=0;HaplotypeScore=101.2545;InbreedingCoeff=0.7256;MQ=76.12;MQ0=4;MQRankSum=-5.188;QD=12.37;ReadPosRankSum=-2.209;VQSLOD=2.6350;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:44.23:0,44,299	0/1:5,1:6:33.79:79,0,34	0/0:50,0:34:25.40:0,25,522	0/0:48,0:28:11.93:0,12,364	0/0:24,0:24:68.81:0,69,1060	0/0:18,0:18:50.99:0,51,802	0/0:9,0:9:27.06:0,27,388	0/0:33,0:33:96.04:0,96,1386	0/0:14,0:14:42.12:0,42,658	1/1:20,3:23:60:397,60,0	1/1:16,3:19:20.47:272,20,0	0/0:8,0:8:21.04:0,21,335	0/0:9,0:9:24.04:0,24,358	0/0:10,0:10:27.07:0,27,438	0/0:19,0:19:57.16:0,57,928	0/0:12,0:12:36.10:0,36,566	0/1:13,0:12:0:143,0,0	0/0:20,0:20:53.10:0,53,292	0/0:26,0:25:67.74:0,68,1043	0/0:24,0:24:66.18:0,66,1059	0/0:10,0:10:30.07:0,30,462	0/0:20,0:20:51.15:0,51,854	0/0:13,0:13:30.03:0,30,458	0/0:11,0:11:25.90:0,26,428	0/0:15,0:15:42.10:0,42,670	0/0:32,0:32:74.66:0,75,1428	0/0:16,0:16:45.12:0,45,721	0/0:16,0:16:47.98:0,48,733
chr10	86253380	.	G	GT	6879.23	PASS	AB=0.571;AC=25;AF=0.446;AN=56;BaseQRankSum=-5.164;DP=550;FS=19.778;HRun=9;HaplotypeScore=64.0909;InbreedingCoeff=0.9257;MQ=61.82;MQ0=2;MQRankSum=0.532;QD=25.76;ReadPosRankSum=0.694;VQSLOD=3.4770;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,14:19:39.11:431,39,0	0/1:2,6:8:5:178,0,5	0/0:45,0:18:19.48:0,19,155	0/0:35,0:16:6.32:0,6,69	0/0:22,0:22:56.97:0,57,494	0/0:18,0:18:47.98:0,48,417	0/0:16,0:16:44.95:0,45,382	1/1:11,21:32:60.15:655,60,0	0/0:12,0:12:35.99:0,36,312	1/1:1,27:28:81.21:888,81,0	1/1:2,16:18:45.08:481,45,0	0/0:12,0:12:35.99:0,36,312	0/0:16,0:16:41.99:0,42,364	0/0:10,0:10:29.98:0,30,258	0/0:21,0:21:53.95:0,54,466	0/0:15,0:15:41.98:0,42,364	1/1:4,13:17:30.08:332,30,0	1/1:3,16:19:51.09:550,51,0	1/1:6,19:23:34.16:600,34,0	1/1:3,27:30:75.19:822,75,0	1/1:1,6:7:12.03:133,12,0	0/0:14,0:14:35.99:0,36,312	0/0:9,0:9:20.99:0,21,182	0/0:13,0:13:35.92:0,36,301	0/0:24,0:24:66.45:0,66,571	1/1:4,30:34:93.01:991,93,0	1/1:2,14:17:44.79:459,45,0	1/1:2,10:12:35.68:358,36,0
chr10	86254814	.	AAAAAAAG	A	754.98	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.370;DP=669;FS=0.000;HRun=0;HaplotypeScore=151.9082;InbreedingCoeff=0.8975;MQ=58.55;MQ0=11;MQRankSum=-5.486;QD=25.17;ReadPosRankSum=-0.938;VQSLOD=2.7147;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,23:29:42.10:850,42,0	0/0:14,0:14:27.08:0,27,868	0/0:19,0:6:11.95:0,12,228	0/0:27,0:7:7.96:0,8,242	0/0:27,0:27:66.23:0,66,2061	0/0:24,0:24:51.17:0,51,1621	0/0:25,0:25:60.21:0,60,1872	0/0:19,0:18:33.11:0,33,972	0/0:21,0:21:51.16:0,51,1457	0/0:31,0:31:78.27:0,78,2540	0/0:24,0:24:51.16:0,51,1440	0/0:19,0:19:36.11:0,36,1129	0/0:18,0:18:33.11:0,33,974	0/0:15,0:14:30.10:0,30,1039	0/0:29,0:29:72.25:0,72,2426	0/0:29,0:29:63.22:0,63,2023	0/0:50,0:50:99:0,108,3198	0/0:32,0:31:72.23:0,72,2046	0/0:10,0:10:18.05:0,18,507	0/0:21,0:21:48.64:0,49,1240	0/0:18,0:18:42.14:0,42,1420	0/0:30,0:30:60.19:0,60,1717	0/0:33,0:33:78.74:0,79,2571	0/0:15,0:15:36.11:0,36,1012	0/0:32,0:32:84.29:0,84,2808	0/0:25,0:25:69.24:0,69,2341	0/0:20,0:19:48.15:0,48,1381	0/0:12,0:12:33.11:0,33,1205
chr10	86255637	.	A	ACG	8324.02	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-10.189;DP=437;FS=21.050;HRun=0;HaplotypeScore=49.6445;InbreedingCoeff=0.9003;MQ=74.43;MQ0=1;MQRankSum=-0.744;QD=34.26;ReadPosRankSum=1.970;VQSLOD=4.5053;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:14:30:273,30,0	1/1:0,5:5:15.05:255,15,0	0/0:10,0:10:18.04:0,18,200	0/1:17,0:14:15.04:15,0,162	0/0:5,0:5:15.05:0,15,195	0/0:11,0:11:33.09:0,33,414	0/0:15,0:15:36.10:0,36,453	1/1:2,3:5:9.03:153,9,0	0/0:16,0:16:45.10:0,45,540	1/1:0,20:21:60.19:994,60,0	1/1:1,4:5:9.03:153,9,0	0/0:24,0:24:57.17:0,57,726	0/0:14,0:14:36.12:0,36,468	0/0:21,0:21:57.19:0,57,741	0/0:12,0:12:30.10:0,30,390	0/0:14,0:14:42.14:0,42,546	1/1:3,23:26:48.16:816,48,0	1/1:0,19:19:48.16:815,48,0	1/1:2,5:7:12:173,12,0	1/1:0,6:7:15.05:251,15,0	1/1:10,67:78:99:2853,168,0	0/0:8,0:8:17.91:0,18,195	0/0:7,0:7:21.07:0,21,273	0/0:21,0:21:57.10:0,57,663	0/0:16,0:16:42.14:0,42,545	1/1:3,12:15:39.13:660,39,0	1/1:0,14:15:33.11:558,33,0	1/1:1,7:8:21.07:357,21,0
chr10	86256374	.	TTC	T	103.28	PASS	AB=0.928;AC=10;AF=0.179;AN=56;BaseQRankSum=3.335;DP=307;FS=7.936;HRun=0;HaplotypeScore=57.8582;InbreedingCoeff=0.2058;MQ=79.29;MQ0=5;MQRankSum=-2.251;QD=1.78;ReadPosRankSum=2.177;VQSLOD=0.3531;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:7.31:0,7,56	0/0:3,0:3:5.20:0,5,27	0/0:45,0:23:33.09:0,33,334	0/0:31,0:15:18.02:0,18,167	0/0:5,0:5:12.02:0,12,140	0/0:5,0:5:15.01:0,15,149	0/0:4,0:4:12.01:0,12,124	0/0:26,1:27:20.39:0,20,268	0/0:5,0:5:14.99:0,15,158	0/0:11,0:11:27.36:0,27,167	0/1:7,0:7:3.76:35,0,4	0/0:7,0:7:20.99:0,21,210	0/0:5,0:5:5.81:0,6,117	0/0:6,0:6:17.06:0,17,173	0/0:6,0:6:15.02:0,15,155	0/0:5,0:5:15.02:0,15,163	0/0:25,0:25:27.93:0,28,156	0/0:28,0:27:27.78:0,28,176	0/1:12,0:12:8.53:9,0,46	0/1:8,0:8:19.26:19,0,34	0/1:4,1:5:21.82:22,0,82	1/1:1,0:1:1.25:3,1,0	0/0:3,0:3:5.99:0,6,49	0/0:9,0:9:20.93:0,21,211	0/0:6,0:6:13.32:0,13,152	1/1:4,1:5:7.79:39,8,0	0/1:5,1:6:13.48:34,0,13	0/1:12,2:14:4.29:78,0,4
chr10	86256376	.	CTTT	C	1492.83	PASS	AB=0.728;AC=14;AF=0.250;AN=56;BaseQRankSum=-3.867;DP=315;FS=5.786;HRun=14;HaplotypeScore=60.1872;InbreedingCoeff=0.4471;MQ=80.07;MQ0=9;MQRankSum=0.980;QD=9.27;ReadPosRankSum=4.426;VQSLOD=-0.5791;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:2,7:9:11.46:203,0,11	1/1:1,2:3:3:35,3,0	0/0:53,0:26:54.98:0,55,448	0/1:40,0:19:2.51:3,0,62	0/0:3,0:4:9.03:0,9,156	0/0:4,0:5:9.01:0,9,96	0/0:4,0:4:6.02:0,6,113	0/1:15,1:25:6.18:6,0,72	0/0:5,0:5:6.02:0,6,113	1/1:3,6:9:17.91:210,18,0	1/1:1,6:7:21.06:238,21,0	0/0:7,0:7:9.03:0,9,169	0/0:5,0:5:15.01:0,15,231	0/0:6,0:6:12.02:0,12,175	0/0:3,0:6:12.04:0,12,185	0/0:4,0:5:12.02:0,12,153	1/1:6,19:25:32.95:368,33,0	1/1:7,21:28:40.36:579,40,0	0/0:7,0:12:14.21:0,14,51	0/0:2,0:8:6.23:0,6,14	0/0:5,0:5:1.25:0,1,3	0/0:1,0:1:2.80:0,3,13	0/0:3,0:3:2.97:0,3,20	0/0:6,0:6:11.90:0,12,154	0/0:4,0:6:13.27:0,13,183	0/0:2,0:4:4.21:0,4,10	0/0:2,0:6:3.74:0,4,8	0/1:6,0:14:15.86:16,0,25
chr10	86256428	.	TTATA	T	1550.40	PASS	AB=0.833;AC=10;AF=0.227;AN=44;BaseQRankSum=3.444;DP=235;FS=11.591;HRun=0;HaplotypeScore=59.7901;InbreedingCoeff=0.4832;MQ=100.28;MQ0=3;MQRankSum=-2.404;QD=18.91;ReadPosRankSum=-0.556;VQSLOD=1.9485;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:15.05:0,15,348	./.	0/1:35,0:14:5.12:5,0,57	0/0:66,0:33:13.86:0,14,292	0/0:1,0:1:3.01:0,3,77	0/0:3,0:3:9.03:0,9,203	./.	1/1:5,18:23:54.18:920,54,0	0/0:3,0:3:9.03:0,9,232	0/0:3,0:3:9.03:0,9,228	0/0:5,0:5:15.05:0,15,387	0/0:1,0:1:3.01:0,3,77	0/0:1,0:1:3.01:0,3,77	0/0:1,0:1:3.01:0,3,77	0/0:2,0:2:6.02:0,6,142	0/0:2,0:2:6.02:0,6,155	0/0:28,0:28:63.22:0,63,1617	0/0:22,0:21:57.16:0,57,1331	1/1:4,3:7:12.03:186,12,0	./.	./.	./.	0/0:2,0:2:6.02:0,6,154	./.	0/0:4,0:4:9.03:0,9,232	0/1:1,1:2:47.37:47,0,71	1/1:0,3:3:6.02:107,6,0	1/1:4,8:12:24.08:427,24,0
chr10	86256599	.	T	TG	439.95	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.264;DP=409;FS=1.681;HRun=0;HaplotypeScore=64.5511;InbreedingCoeff=0.6291;MQ=71.79;MQ0=17;MQRankSum=-0.972;QD=20.00;ReadPosRankSum=0.705;VQSLOD=5.3403;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:22:43.73:534,44,0	0/0:5,0:4:10.51:0,11,88	0/0:81,0:21:9.52:0,10,193	0/0:84,0:25:2.93:0,3,127	0/0:10,0:10:24.14:0,24,231	0/0:14,0:14:42.06:0,42,434	0/0:9,0:9:25.59:0,26,259	0/0:19,0:18:46.80:0,47,372	0/0:4,0:4:12.02:0,12,136	0/0:7,0:7:18.94:0,19,162	0/0:10,0:10:21.43:0,21,130	0/0:6,0:6:17.89:0,18,181	0/0:4,0:4:12.03:0,12,148	0/0:5,0:4:12.01:0,12,131	0/0:4,0:4:12.02:0,12,130	0/0:4,0:4:12.02:0,12,137	0/0:27,0:27:51.25:0,51,371	0/0:21,0:21:55.56:0,56,618	0/0:13,0:11:28.91:0,29,210	0/0:4,0:4:11.94:0,12,90	0/0:7,0:6:17.93:0,18,138	0/0:7,0:7:17.99:0,18,184	0/0:8,0:8:21.85:0,22,237	0/0:7,0:7:16.79:0,17,159	0/0:4,0:4:12.04:0,12,166	0/0:8,0:8:23.93:0,24,195	0/0:7,0:7:20.93:0,21,163	0/0:8,0:8:14.94:0,15,115
chr10	86259349	.	G	GAAA	4318.99	PASS	AB=0.980;AC=26;AF=0.464;AN=56;BaseQRankSum=6.039;DP=338;FS=10.750;HRun=7;HaplotypeScore=86.0101;InbreedingCoeff=0.6890;MQ=44.18;MQ0=9;MQRankSum=-4.396;QD=23.47;ReadPosRankSum=-2.032;VQSLOD=1.2614;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,2:25:51.01:691,51,0	1/1:4,0:5:12.04:187,12,0	1/1:7,0:2:0.47:1,0,0	0/0:5,0:2:3:0,3,33	0/0:10,0:10:12.01:0,12,157	0/0:9,0:9:11.91:0,12,164	0/0:17,0:16:20.80:0,21,258	0/1:23,1:22:4.85:443,0,5	0/0:14,0:14:14.94:0,15,204	1/1:10,0:9:21.03:285,21,0	1/1:12,0:12:30.03:402,30,0	0/0:11,0:10:8.61:0,9,122	0/0:16,0:16:17.93:0,18,215	0/0:13,0:13:5.92:0,6,82	0/0:11,0:11:5.69:0,6,80	0/0:15,0:15:14.83:0,15,200	1/1:29,2:30:51.57:685,52,0	1/1:14,1:13:21.02:302,21,0	1/1:14,2:15:29.59:429,30,0	1/1:6,0:6:12.04:173,12,0	1/1:8,1:8:3.01:46,3,0	0/0:3,0:3:9.03:0,9,122	0/0:5,0:5:6.01:0,6,82	0/0:19,0:18:23.68:0,24,321	0/0:6,0:6:6:0,6,82	0/1:12,0:12:16.89:272,0,17	1/1:6,1:7:21.07:312,21,0	1/1:5,0:3:6.02:91,6,0
chr10	86259354	.	A	AAAG	5469.50	PASS	AB=0.652;AC=22;AF=0.393;AN=56;BaseQRankSum=-3.002;DP=371;FS=43.055;HRun=0;HaplotypeScore=76.2259;InbreedingCoeff=0.6391;MQ=50.60;MQ0=8;MQRankSum=-6.839;QD=29.41;ReadPosRankSum=4.079;VQSLOD=3.0466;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,12:22:0.73:729,0,1	1/1:2,2:5:2.07:218,2,0	0/0:14,0:8:9.05:0,9,46	0/0:8,0:3:4.57:0,5,48	0/0:14,0:14:35.88:0,36,363	0/0:11,0:11:21.04:0,21,273	0/0:17,0:16:30:0,30,376	0/1:14,9:23:41.99:614,0,42	0/0:14,0:14:27.05:0,27,347	1/1:5,5:10:21.01:373,21,0	1/1:2,10:12:30.05:550,30,0	0/0:11,0:11:29.82:0,30,301	0/0:16,0:16:35.98:0,36,409	0/0:14,0:14:23.99:0,24,247	0/0:12,0:12:23.97:0,24,251	0/0:13,0:13:33.02:0,33,383	1/1:19,10:28:27.81:718,28,0	1/1:4,12:16:21.07:409,21,0	0/1:10,11:21:18.53:637,0,19	1/1:6,3:9:18.80:298,19,0	1/1:5,3:7:5.08:72,5,0	0/0:4,0:4:12:0,12,165	0/0:11,0:11:17.98:0,18,195	0/0:19,0:18:32.63:0,33,438	0/0:7,0:7:17.98:0,18,194	0/1:4,7:11:24.81:402,0,25	1/1:3,5:9:13.04:363,13,0	1/1:4,1:3:8.43:87,8,0
chr10	86259781	.	GA	G	8078.56	PASS	AB=0.914;AC=28;AF=0.500;AN=56;BaseQRankSum=11.400;DP=716;FS=3.919;HRun=10;HaplotypeScore=77.8237;InbreedingCoeff=0.8479;MQ=72.08;MQ0=1;MQRankSum=-0.272;QD=19.61;ReadPosRankSum=1.253;VQSLOD=5.8832;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,39:49:85.81:962,86,0	1/1:0,8:8:24:208,24,0	0/0:22,0:20:21.23:0,21,320	0/1:18,1:17:22.04:22,0,126	0/0:26,0:26:60:0,60,645	0/0:23,2:25:8.05:0,8,545	0/0:20,0:20:48.13:0,48,531	1/1:11,25:36:74.92:641,75,0	0/0:21,0:21:51.13:0,51,557	1/1:2,33:36:99:880,102,0	1/1:1,18:19:50.99:443,51,0	0/0:30,2:32:35.12:0,35,837	0/0:18,0:18:36.07:0,36,381	0/1:12,2:14:13.42:13,0,300	0/0:18,0:19:47.95:0,48,505	0/0:20,1:21:25.07:0,25,497	1/1:5,31:36:77.98:677,78,0	1/1:4,29:34:83.02:709,83,0	1/1:5,21:26:59.97:521,60,0	1/1:1,20:21:56.98:495,57,0	1/1:3,19:22:56.98:495,57,0	0/0:15,1:16:16.06:0,16,406	0/0:30,1:32:58.01:0,58,836	0/0:32,0:33:90.08:0,90,976	0/0:17,0:17:48.13:0,48,531	1/1:7,43:50:99:1120,129,0	1/1:3,27:31:80.01:683,80,0	1/1:2,8:10:23.99:208,24,0
chr10	86260925	.	G	GT	4404.10	PASS	AB=0.623;AC=13;AF=0.232;AN=56;BaseQRankSum=9.214;DP=702;FS=1.538;HRun=0;HaplotypeScore=101.1287;InbreedingCoeff=0.8904;MQ=70.31;MQ0=3;MQRankSum=1.096;QD=24.60;ReadPosRankSum=-1.180;VQSLOD=5.4083;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:95.79:0,96,567	0/0:9,0:9:23.27:0,23,155	0/0:39,0:24:39.59:0,40,682	0/0:41,0:27:53.26:0,53,620	0/0:29,0:29:81.26:0,81,1108	0/0:22,0:22:63.20:0,63,864	0/0:17,0:17:48.10:0,48,616	1/1:6,22:27:55.21:766,55,0	0/0:25,0:25:75.25:0,75,1047	0/0:19,0:19:48.03:0,48,242	0/0:14,0:14:30.19:0,30,181	0/0:23,0:23:66.19:0,66,885	0/0:26,0:26:78.23:0,78,1051	0/0:32,0:32:93.31:0,93,1294	0/0:27,0:27:81.24:0,81,1085	0/0:25,0:25:72.22:0,72,973	0/0:30,0:30:76.45:0,76,428	0/0:24,0:24:69.43:0,69,400	1/1:9,18:27:42.12:643,42,0	1/1:2,24:26:61.69:680,62,0	1/1:4,14:19:14.89:458,15,0	0/0:12,0:12:30.09:0,30,404	0/0:23,0:23:69.20:0,69,921	0/0:28,0:28:81.25:0,81,1113	0/0:20,0:20:60.20:0,60,836	0/1:13,20:33:29.64:631,0,30	1/1:1,34:35:76.35:981,76,0	1/1:4,7:11:12.58:245,13,0
chr10	86261872	.	G	GT	7229.59	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=2.630;DP=670;FS=1.866;HRun=1;HaplotypeScore=77.8984;InbreedingCoeff=0.9991;MQ=87.86;MQ0=0;MQRankSum=-1.598;QD=40.39;ReadPosRankSum=2.225;VQSLOD=5.5738;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,46:48:99:1886,126,0	1/1:0,8:8:24.08:359,24,0	0/0:25,0:25:72.20:0,72,897	0/0:21,0:21:63.20:0,63,807	0/0:22,0:22:63.18:0,63,788	0/0:18,0:18:54.17:0,54,697	0/0:30,0:30:87.26:0,87,1101	0/0:23,0:23:63.20:0,63,817	0/0:22,0:22:66.20:0,66,841	1/1:1,36:37:99:1537,108,0	1/1:1,17:18:48.16:710,48,0	0/0:22,0:22:66.17:0,66,811	0/0:25,0:25:75.24:0,75,972	0/0:18,0:18:51.17:0,51,662	0/0:31,0:31:89.95:0,90,1153	0/0:21,0:21:63.20:0,63,818	1/1:0,40:40:99:1483,99,0	1/1:0,28:28:84.28:1255,84,0	0/0:14,0:14:39.12:0,39,492	0/0:17,0:17:51.15:0,51,647	0/0:28,0:28:84.25:0,84,1073	0/0:23,0:23:63.18:0,63,801	0/0:17,0:17:48.16:0,48,623	0/0:42,0:42:99:0,123,1558	0/0:18,0:18:54.18:0,54,701	0/0:30,1:31:42.29:0,42,1028	0/0:15,0:15:45.15:0,45,579	0/0:8,0:8:24.08:0,24,310
chr10	86262253	.	G	GT	1222.31	PASS	AB=0.978;AC=7;AF=0.125;AN=56;BaseQRankSum=-1.568;DP=559;FS=7.752;HRun=9;HaplotypeScore=86.7630;InbreedingCoeff=0.5417;MQ=72.77;MQ0=5;MQRankSum=-0.217;QD=9.19;ReadPosRankSum=-1.483;VQSLOD=1.7301;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:14.10:611,14,0	0/0:8,0:8:10.88:0,11,26	0/1:30,1:26:17.17:17,0,174	0/0:22,0:18:23.94:0,24,199	0/0:26,0:26:68.86:0,69,599	0/0:23,0:23:68.97:0,69,595	0/0:26,0:26:65.97:0,66,568	0/0:30,0:30:71.15:0,71,592	0/0:10,0:11:26:0,26,211	0/1:19,0:19:4.12:57,0,4	0/1:28,1:29:19.69:49,0,20	0/0:20,0:20:50.94:0,51,433	0/0:10,0:10:29.99:0,30,260	0/0:15,0:15:32.95:0,33,282	0/0:16,0:16:41.98:0,42,362	0/0:22,0:22:59.98:0,60,521	0/0:32,0:32:10.22:0,10,43	1/1:6,21:28:17:627,17,0	0/0:23,0:23:56.96:0,57,488	0/0:11,0:11:23.93:0,24,208	0/0:16,0:16:44.99:0,45,389	0/0:9,0:9:26.98:0,27,230	0/0:11,0:11:29.99:0,30,260	0/0:23,0:23:62.98:0,63,544	0/0:18,0:18:47:0,47,392	0/0:28,0:28:60.90:0,61,528	0/0:18,0:17:47.98:0,48,416	0/0:8,0:8:15.94:0,16,131
chr10	86262261	.	TTG	T	2651.06	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.519;DP=554;FS=5.531;HRun=0;HaplotypeScore=89.7558;InbreedingCoeff=0.9949;MQ=68.41;MQ0=5;MQRankSum=-1.875;QD=30.83;ReadPosRankSum=0.559;VQSLOD=5.5324;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:57.06:0,57,681	1/1:1,7:8:23.75:310,24,0	0/0:33,0:27:18.86:0,19,467	0/0:22,0:18:35.90:0,36,443	0/0:27,0:27:74.78:0,75,1128	0/0:23,0:23:69.23:0,69,1129	0/0:23,0:23:66.19:0,66,1032	0/0:30,0:30:87.03:0,87,1078	0/0:11,0:11:29.84:0,30,417	1/1:1,18:19:54.05:631,54,0	1/1:4,23:27:70.58:892,71,0	0/0:19,0:19:57.19:0,57,884	0/0:11,0:11:33.09:0,33,490	0/0:14,0:14:39.07:0,39,566	0/0:15,0:15:45.13:0,45,698	0/0:23,0:23:69.19:0,69,1019	1/1:3,29:32:72.20:979,72,0	0/0:28,0:27:23.89:0,24,515	0/0:21,0:20:60.03:0,60,751	0/0:11,0:11:27.02:0,27,422	0/0:16,0:16:48.13:0,48,716	0/0:10,0:10:30.05:0,30,412	0/0:10,0:10:30.09:0,30,451	0/0:23,0:23:66.20:0,66,1014	0/0:17,0:17:51.02:0,51,736	0/0:28,0:28:40.70:0,41,982	0/0:19,0:18:54.10:0,54,731	0/0:7,0:7:20.96:0,21,249
chr10	86262262	.	TG	T	1359.03	PASS	AB=0.969;AC=9;AF=0.161;AN=56;BaseQRankSum=8.311;DP=547;FS=4.028;HRun=1;HaplotypeScore=83.0090;InbreedingCoeff=0.8640;MQ=67.59;MQ0=5;MQRankSum=0.253;QD=11.92;ReadPosRankSum=0.438;VQSLOD=2.1336;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:64.75:0,65,453	1/1:7,1:8:23.71:178,24,0	0/1:30,1:25:26.92:27,0,367	0/0:20,0:17:30.06:0,30,355	0/0:27,0:27:73.92:0,74,916	0/0:24,0:24:72.22:0,72,932	0/0:24,0:24:72.20:0,72,911	0/0:29,0:29:83.63:0,84,922	0/0:10,0:10:24.84:0,25,324	1/1:18,0:18:53.52:376,54,0	1/1:24,2:26:69.35:481,69,0	0/0:19,0:19:57.14:0,57,695	0/0:11,0:11:33.09:0,33,411	0/0:14,0:14:39.07:0,39,476	0/0:15,0:15:45.13:0,45,574	0/0:23,0:23:69.19:0,69,862	1/1:31,0:31:70.88:463,71,0	0/0:27,0:26:47.96:0,48,348	0/0:22,0:21:60.60:0,61,676	0/0:12,0:12:29.93:0,30,348	0/0:16,0:16:48.11:0,48,556	0/0:10,0:10:30.05:0,30,354	0/0:10,0:10:30.08:0,30,374	0/0:23,0:23:66.20:0,66,843	0/0:17,0:17:51.02:0,51,612	0/0:27,0:27:60.16:0,60,799	0/0:19,0:18:54.04:0,54,599	0/0:7,0:7:17.18:0,17,183
chr10	86262465	.	TGA	T	2692.56	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.672;DP=606;FS=16.099;HRun=0;HaplotypeScore=77.3211;InbreedingCoeff=0.9978;MQ=82.14;MQ0=0;MQRankSum=-1.591;QD=34.52;ReadPosRankSum=1.728;VQSLOD=4.8352;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,2123	1/1:0,7:7:21.07:301,21,0	0/0:20,0:20:57.13:0,57,960	0/0:12,0:12:30.08:0,30,499	0/0:30,0:30:87.28:0,87,1553	0/0:14,0:14:42.07:0,42,668	0/0:24,0:24:66.22:0,66,1189	0/0:30,0:30:78.22:0,78,1364	0/0:17,0:17:51.17:0,51,910	1/1:2,16:18:48.15:666,48,0	1/1:0,13:13:23.53:342,24,0	0/0:20,0:20:57.18:0,57,1007	0/0:15,0:15:42.14:0,42,764	0/0:21,0:21:63.22:0,63,1136	0/0:16,0:16:48.16:0,48,879	0/0:20,0:20:57.19:0,57,1027	1/1:1,39:40:99:1544,108,0	0/0:30,0:30:87.30:0,87,1584	0/0:30,0:30:81.27:0,81,1401	0/0:18,0:18:51.17:0,51,911	0/0:48,0:48:99:0,141,2522	0/0:16,0:16:48.12:0,48,788	0/0:12,0:12:33.11:0,33,604	0/0:26,0:26:78.27:0,78,1391	0/0:17,0:17:51.17:0,51,934	0/0:23,0:23:66.23:0,66,1187	0/0:18,0:18:54.17:0,54,959	0/0:10,0:10:30.10:0,30,548
chr10	86267614	.	GC	G	1460.23	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.583;DP=639;FS=0.611;HRun=2;HaplotypeScore=62.6634;InbreedingCoeff=0.9307;MQ=78.55;MQ0=0;MQRankSum=0.180;QD=31.74;ReadPosRankSum=1.884;VQSLOD=3.3699;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,44:46:99:1555,120,0	0/0:4,0:4:8.99:0,9,110	0/0:16,0:16:42.02:0,42,523	0/0:12,0:12:33.04:0,33,453	0/0:7,0:7:18.05:0,18,250	0/0:20,0:20:60.18:0,60,856	0/0:40,0:40:99:0,117,1693	0/0:12,0:12:33.11:0,33,494	0/0:24,0:24:69.22:0,69,1012	0/0:12,0:12:33.11:0,33,477	0/0:9,0:9:27.09:0,27,404	0/0:33,0:33:99:0,99,1459	0/0:24,0:24:72.23:0,72,1052	0/0:29,0:29:84.27:0,84,1236	0/0:25,0:25:75.23:0,75,1084	0/0:15,0:15:45.14:0,45,651	0/0:39,0:39:99:0,117,1727	0/0:34,0:34:96.31:0,96,1417	0/0:22,0:22:60.14:0,60,784	0/0:9,0:9:27.09:0,27,404	0/0:64,0:64:99:0,169,2435	0/0:22,0:22:60.16:0,60,824	0/0:10,0:10:27.09:0,27,399	0/0:36,0:36:99:0,108,1553	0/0:19,0:19:51.12:0,51,696	0/0:28,0:28:78.25:0,78,1131	0/0:20,0:20:54.18:0,54,803	0/0:8,0:8:21.07:0,21,313
chr10	86267798	.	G	GA	1918.48	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.781;DP=689;FS=0.577;HRun=1;HaplotypeScore=64.1122;InbreedingCoeff=0.9697;MQ=84.12;MQ0=0;MQRankSum=-4.814;QD=39.97;ReadPosRankSum=1.250;VQSLOD=4.2616;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,48:48:99:2013,126,0	0/0:4,0:4:12.04:0,12,168	0/0:18,0:18:51.13:0,51,656	0/0:23,0:23:55.16:0,55,754	0/0:21,0:21:60.15:0,60,785	0/0:31,0:31:93.28:0,93,1264	0/0:28,0:28:84.23:0,84,1122	0/0:26,0:26:78.24:0,78,1061	0/0:26,0:26:78.26:0,78,1090	0/0:24,0:24:69.23:0,69,951	0/0:12,0:12:36.12:0,36,499	0/0:27,0:27:78.26:0,78,1090	0/0:22,0:22:63.20:0,63,865	0/0:23,0:23:69.23:0,69,964	0/0:25,0:25:75.24:0,75,1031	0/0:30,0:30:90.29:0,90,1241	0/0:36,0:36:99:0,108,1509	0/0:27,0:27:78.26:0,78,1090	0/0:22,0:22:66.17:0,66,887	0/0:13,0:13:39.12:0,39,528	0/0:48,0:48:99:0,144,1976	0/0:15,0:15:45.15:0,45,629	0/0:23,0:23:66.21:0,66,906	0/0:22,0:22:66.22:0,66,923	0/0:32,0:32:96.32:0,96,1342	0/0:31,0:31:93.30:0,93,1285	0/0:22,0:22:66.22:0,66,923	0/0:10,0:10:30.10:0,30,419
chr10	86270720	.	GCA	G	181.23	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=3.674;DP=297;FS=0.000;HRun=0;HaplotypeScore=42.6987;InbreedingCoeff=0.7915;MQ=71.83;MQ0=4;MQRankSum=-2.240;QD=16.48;ReadPosRankSum=-0.806;VQSLOD=3.1583;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,6:11:21.07:273,21,0	./.	0/0:17,0:11:26.79:0,27,403	0/0:15,0:13:14.74:0,15,275	0/0:7,0:7:21.07:0,21,357	0/0:11,0:10:30.10:0,30,510	0/0:15,0:15:39.12:0,39,636	0/0:18,0:18:42.14:0,42,713	0/0:3,0:3:9.03:0,9,153	0/0:11,0:10:21.05:0,21,330	0/0:7,0:7:18.06:0,18,302	0/0:9,0:9:24.08:0,24,408	0/0:10,0:10:24.03:0,24,351	0/0:6,0:6:18.06:0,18,299	0/0:10,0:10:27.09:0,27,459	0/0:11,0:11:27.09:0,27,450	0/0:17,0:17:45.15:0,45,753	0/0:20,0:19:57.19:0,57,961	0/0:13,0:13:30.10:0,30,492	0/0:3,0:3:9.03:0,9,153	0/0:23,0:23:48.15:0,48,777	0/0:4,0:4:9.03:0,9,153	0/0:6,0:6:18.06:0,18,306	0/0:13,0:13:27.09:0,27,459	0/0:9,0:9:21.05:0,21,329	0/0:13,0:13:30.10:0,30,506	0/0:7,0:7:18.06:0,18,296	0/0:6,0:6:18.06:0,18,306
chr10	86270759	.	GTA	G	93.56	PASS	AB=0.905;AC=7;AF=0.152;AN=46;BaseQRankSum=1.309;DP=193;FS=0.000;HRun=0;HaplotypeScore=29.4969;InbreedingCoeff=-0.0051;MQ=64.08;MQ0=4;MQRankSum=0.774;QD=1.56;ReadPosRankSum=1.855;VQSLOD=1.0188;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:0,0:1:3:0,3,26	0/0:5,0:2:0:0,0,0	0/0:13,0:5:9.04:0,9,57	0/0:7,0:7:21.07:0,21,335	0/1:6,2:8:60.73:61,0,81	0/0:7,0:7:5.77:0,6,80	0/0:13,0:10:18.01:0,18,200	0/0:4,0:4:12.04:0,12,194	0/0:5,0:5:6.01:0,6,55	0/0:1,0:1:2.99:0,3,24	0/0:5,0:5:9.02:0,9,122	0/0:9,0:9:24.06:0,24,363	0/0:1,0:1:3.01:0,3,41	0/0:8,0:8:21.07:0,21,332	0/1:8,1:9:12.32:12,0,312	0/0:7,0:25:29.72:0,30,245	0/1:28,1:28:12.43:12,0,767	0/0:5,0:5:3:0,3,27	./.	./.	0/0:2,0:2:3.01:0,3,48	1/1:2,3:5:6.02:73,6,0	0/1:3,0:3:30.16:30,0,40	0/1:5,1:6:21.33:21,0,179	./.	./.	0/0:6,0:6:6.01:0,6,63
chr10	86271088	.	GCTCGCTCGCTCTCTCTCTCTCTCTCTCT	G	2721.23	PASS	AB=1.000;AC=14;AF=0.259;AN=54;BaseQRankSum=2.289;DP=423;FS=25.217;HRun=0;HaplotypeScore=231.2945;InbreedingCoeff=0.2899;MQ=72.78;MQ0=12;MQRankSum=0.127;QD=21.26;ReadPosRankSum=-2.768;VQSLOD=0.6922;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,0:1:3.01:32,3,0	0/0:31,0:12:26.42:0,26,402	0/0:50,0:23:41.08:0,41,1055	0/0:4,0:4:10.85:0,11,915	0/0:12,0:11:33.04:0,33,2979	0/0:27,0:27:72.25:0,72,5121	0/1:16,0:15:99:276,0,559	0/0:14,0:14:32.78:0,33,2454	1/1:1,11:11:27.05:724,27,0	1/1:0,8:8:3.90:206,4,0	0/0:15,0:15:33.98:0,34,2751	0/0:14,0:14:31.82:0,32,1994	0/0:10,0:10:27.56:0,28,2740	0/0:18,0:18:45.13:0,45,4429	0/0:21,0:21:51.11:0,51,4460	1/1:1,21:22:8.70:671,9,0	0/0:18,0:18:51.09:0,51,2994	0/1:11,0:11:99:230,0,580	0/0:3,0:3:6.02:0,6,485	0/1:16,0:15:99:252,0,1312	0/0:6,0:6:12.04:0,12,1262	0/0:3,0:3:6.02:0,6,721	0/0:23,0:23:63.11:0,63,5336	0/0:8,0:8:18.06:0,18,1766	0/1:12,0:12:99:186,0,2002	0/1:19,0:19:27.83:28,0,541	0/1:11,0:11:99:278,0,555
chr10	86271090	.	TCG	T	1596.38	PASS	AC=22;AF=0.407;AN=54;BaseQRankSum=9.937;DP=423;FS=4.704;HRun=0;HaplotypeScore=68.2703;InbreedingCoeff=0.8867;MQ=71.62;MQ0=12;MQRankSum=0.068;QD=11.91;ReadPosRankSum=-1.768;VQSLOD=2.6768;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,0:1:2.92:17,3,0	0/0:31,0:12:21.04:0,21,336	0/0:49,0:22:44.30:0,44,523	0/0:4,0:4:12.03:0,12,195	0/0:13,0:12:36.05:0,36,582	0/0:27,0:27:72.25:0,72,1320	1/1:1,0:14:38.92:320,39,0	0/0:13,0:13:32.78:0,33,563	1/1:12,0:11:21.26:158,21,0	1/1:8,0:8:2.83:17,3,0	0/0:12,0:12:35.71:0,36,590	0/0:13,0:13:22.15:0,22,426	0/0:10,0:10:27.09:0,27,495	0/0:18,0:18:45.15:0,45,743	0/0:21,0:21:51.17:0,51,899	1/1:22,0:22:8.71:47,9,0	0/0:17,0:17:43.15:0,43,774	1/1:11,0:11:29.98:263,30,0	1/1:3,0:3:6.44:47,6,0	1/1:20,0:19:23.67:305,24,0	0/0:7,0:7:12.04:0,12,230	0/0:3,0:3:6.02:0,6,114	0/0:24,0:24:63.11:0,63,1139	0/0:7,0:7:18.06:0,18,331	1/1:12,0:12:35.18:307,35,0	1/1:1,18:19:8.75:80,9,0	1/1:11,0:11:26.97:241,27,0
chr10	86271092	.	GCTCGCTCTCTCTCT	G	1238.06	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=7.250;DP=436;FS=12.069;HRun=0;HaplotypeScore=143.6455;InbreedingCoeff=0.2837;MQ=68.75;MQ0=13;MQRankSum=0.583;QD=8.91;ReadPosRankSum=-2.295;VQSLOD=1.5715;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,20:21:2.97:0,3,20	1/1:1,0:1:2.80:13,3,0	0/0:31,0:12:13.82:0,14,105	0/0:47,0:20:24.03:0,24,291	0/0:4,0:4:8.98:0,9,358	0/0:15,0:14:37.34:0,37,1608	0/0:26,0:26:71.88:0,72,2216	0/1:16,0:15:99:238,0,194	0/0:12,0:12:29.95:0,30,1132	1/1:12,0:11:18.01:296,18,0	1/1:9,0:8:3.48:79,3,0	0/0:13,0:13:25.08:0,25,1285	0/0:14,0:14:31.52:0,32,803	0/0:12,0:12:30.17:0,30,1400	0/0:17,0:17:42.09:0,42,2133	0/0:22,0:22:53.27:0,53,2144	1/1:22,0:22:9.03:294,9,0	0/0:17,0:17:47.74:0,48,1289	0/1:13,0:13:99:141,0,316	0/0:3,0:3:5.67:0,6,170	0/1:21,0:20:99:120,0,992	0/0:8,0:8:15.03:0,15,774	0/0:4,0:4:6.02:0,6,394	0/0:22,0:22:59.98:0,60,2680	0/0:8,0:8:18.03:0,18,876	0/1:14,0:14:73.07:73,0,954	0/1:20,0:20:4.96:5,0,320	0/1:11,0:11:99:139,0,164
chr10	86271096	.	GCT	G	101.28	PASS	AB=0.925;AC=16;AF=0.333;AN=48;BaseQRankSum=5.371;DP=492;FS=19.618;HRun=0;HaplotypeScore=77.8623;InbreedingCoeff=0.1220;MQ=64.63;MQ0=15;MQRankSum=0.101;QD=0.44;ReadPosRankSum=2.033;VQSLOD=-0.4001;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:29,0:10:0:0,0,0	0/0:47,0:20:0.47:0,0,1	./.	0/0:17,0:16:23.54:0,24,279	0/1:27,1:28:11.81:12,0,199	0/0:25,0:24:12.24:0,12,65	0/0:13,0:13:18.02:0,18,208	1/1:12,0:11:5.68:28,6,0	1/1:9,0:8:0.47:1,0,0	0/1:14,2:16:11.75:12,0,241	0/0:17,0:17:3.47:0,3,105	0/1:15,4:19:2.80:3,0,314	0/1:19,3:22:53.47:53,0,328	0/1:21,5:26:26.61:27,0,366	1/1:23,0:23:8.52:42,9,0	0/0:17,0:17:14.98:0,15,132	0/0:21,0:20:9.64:0,10,54	0/0:5,0:5:1.73:0,2,8	0/0:25,0:24:8.61:0,9,88	0/0:10,0:10:12.02:0,12,140	0/0:6,0:6:8.80:0,9,83	0/0:23,0:22:36.08:0,36,495	0/1:11,0:10:16.72:17,0,81	1/1:14,0:14:0.90:8,1,0	0/1:21,0:21:12.58:31,0,13	./.
chr10	86272403	.	T	TAG	12438.34	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-13.064;DP=657;FS=1.719;HRun=0;HaplotypeScore=77.4198;InbreedingCoeff=0.9731;MQ=76.96;MQ0=5;MQRankSum=-3.000;QD=46.76;ReadPosRankSum=-0.558;VQSLOD=5.7936;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:99:1943,108,0	1/1:0,7:7:21.07:378,21,0	0/0:26,0:26:66.22:0,66,924	0/0:17,0:17:45.15:0,45,630	0/0:14,0:14:30.10:0,30,419	0/0:25,0:25:75.25:0,75,1050	0/0:41,0:41:99:0,117,1638	1/1:2,24:28:71.70:1220,72,0	0/0:29,0:29:81.25:0,81,1116	1/1:2,15:18:51.17:900,51,0	1/1:0,11:10:27.09:486,27,0	0/0:30,0:30:87.26:0,87,1183	0/0:20,0:20:57.17:0,57,779	0/0:19,0:19:54.18:0,54,754	0/0:36,0:36:99:0,108,1510	0/0:22,0:22:60.19:0,60,821	1/1:0,38:38:99:1945,108,0	0/0:25,0:25:72.21:0,72,984	1/1:5,13:19:42.13:720,42,0	1/1:0,8:8:24.08:432,24,0	1/1:1,54:54:99:2532,141,0	0/0:17,0:17:35.77:0,36,499	0/0:8,0:8:18.04:0,18,233	0/0:49,0:49:99:0,132,1849	0/0:13,0:13:33.11:0,33,462	1/1:2,26:28:78.27:1395,78,0	1/1:0,9:9:24.08:432,24,0	1/1:0,3:3:3.01:54,3,0
chr10	86275047	.	G	GAA	2624.81	PASS	AB=0.680;AC=21;AF=0.375;AN=56;BaseQRankSum=-0.180;DP=490;FS=2.079;HRun=13;HaplotypeScore=70.4779;InbreedingCoeff=0.6952;MQ=54.82;MQ0=11;MQRankSum=-0.936;QD=11.67;ReadPosRankSum=-4.334;VQSLOD=1.4387;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:6,2:32:12.08:167,12,0	1/1:2,4:6:13.82:148,14,0	0/0:7,0:4:11.97:0,12,98	0/0:9,0:8:10.48:0,10,92	0/0:13,0:13:14.44:0,14,117	0/0:17,0:18:26.24:0,26,267	0/0:28,0:27:47.41:0,47,404	0/1:18,6:17:30.30:281,0,30	0/0:18,0:18:32.48:0,32,276	1/1:17,4:19:33.77:306,34,0	1/1:7,2:9:12.43:123,12,0	0/0:21,0:21:10.40:0,10,218	0/0:10,0:9:8.65:0,9,66	0/0:14,0:16:29.56:0,30,249	0/0:8,0:8:16.44:0,16,136	0/0:19,0:20:38.45:0,38,329	0/1:12,21:32:28.66:488,0,29	0/0:32,0:32:33.36:0,33,423	1/1:7,14:22:53.03:542,53,0	1/1:6,5:10:8.99:101,9,0	1/1:3,5:9:11.87:136,12,0	0/0:8,0:8:14.86:0,15,176	0/0:14,0:13:20.81:0,21,225	0/0:17,0:18:41.67:0,42,355	0/0:12,0:15:5.73:0,6,214	1/1:9,8:21:15.59:294,16,0	0/1:9,8:19:6.40:160,0,6	1/1:2,7:9:6.02:82,6,0
chr10	86275427	.	AT	A	2152.70	PASS	AB=0.742;AC=21;AF=0.375;AN=56;BaseQRankSum=5.820;DP=453;FS=6.774;HRun=13;HaplotypeScore=59.7579;InbreedingCoeff=0.7613;MQ=63.51;MQ0=2;MQRankSum=-2.316;QD=11.57;ReadPosRankSum=-1.142;VQSLOD=2.8640;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,1:35:44.21:0,44,547	1/1:2,5:7:14.87:105,15,0	0/0:23,0:17:31.91:0,32,246	0/0:12,0:12:5.02:0,5,57	0/0:14,0:15:35.87:0,36,325	0/0:15,0:15:36.05:0,36,345	0/0:20,2:27:9.94:0,10,392	1/1:8,18:26:0.53:301,1,0	0/0:11,0:11:30.02:0,30,284	0/1:1,11:13:0.33:152,0,0	1/1:2,8:10:20.84:153,21,0	0/0:24,0:25:55.10:0,55,565	0/1:10,0:11:0.14:0,0,140	0/0:12,0:12:21.21:0,21,163	0/0:15,0:15:29.01:0,29,315	0/0:11,1:13:16.98:0,17,309	1/1:5,19:25:17.60:283,18,0	0/0:24,0:24:35.19:0,35,493	1/1:7,17:24:53.63:392,54,0	1/1:4,9:13:29.77:214,30,0	0/1:7,5:12:34.94:97,0,35	0/0:6,0:6:11.97:0,12,106	0/0:6,0:8:23.74:0,24,204	0/0:15,0:15:33.04:0,33,315	0/0:8,0:8:15.02:0,15,146	1/1:7,11:18:15.38:239,15,0	1/1:4,15:21:50.68:348,51,0	1/1:3,3:6:10.50:70,10,0
chr10	86275467	.	G	GT	2885.03	PASS	AB=0.567;AC=13;AF=0.232;AN=56;BaseQRankSum=-2.201;DP=467;FS=0.000;HRun=8;HaplotypeScore=56.1465;InbreedingCoeff=0.9015;MQ=63.30;MQ0=4;MQRankSum=-4.659;QD=23.65;ReadPosRankSum=0.194;VQSLOD=4.0233;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:75.01:0,75,678	0/0:9,0:9:24.01:0,24,220	0/0:18,0:15:32.89:0,33,263	0/0:11,0:7:17.76:0,18,150	0/0:15,0:15:42:0,42,379	0/0:17,0:17:51.02:0,51,462	0/0:23,0:23:56.96:0,57,502	1/1:12,16:28:63.08:691,63,0	0/0:10,0:10:27:0,27,242	0/0:17,0:17:45.02:0,45,409	0/0:15,0:15:39.01:0,39,356	0/0:21,0:21:51.02:0,51,467	0/0:6,0:6:15.01:0,15,137	0/0:10,0:10:30.02:0,30,274	0/0:20,0:20:54.02:0,54,494	0/0:18,0:18:54.03:0,54,494	0/0:27,0:26:69.04:0,69,631	0/0:27,0:27:70.75:0,71,634	1/1:7,8:14:21.53:243,22,0	0/1:4,13:17:9.89:361,0,10	1/1:0,9:9:18.05:207,18,0	0/0:11,0:11:30:0,30,271	0/0:10,0:10:24:0,24,219	0/0:12,0:12:32.98:0,33,290	0/0:15,0:16:47.06:0,47,418	1/1:4,13:17:42.12:485,42,0	1/1:2,20:24:63.02:706,63,0	1/1:0,12:12:33.10:381,33,0
chr10	86275618	.	T	TC	137.14	PASS	AB=0.615;AC=3;AF=0.054;AN=56;BaseQRankSum=4.546;DP=522;FS=0.000;HRun=0;HaplotypeScore=67.7866;InbreedingCoeff=0.5455;MQ=76.75;MQ0=0;MQRankSum=-4.342;QD=13.71;ReadPosRankSum=3.058;VQSLOD=4.7946;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,1845	0/0:8,0:8:24.08:0,24,335	0/0:22,0:21:57.45:0,57,711	0/0:13,0:13:38.46:0,38,468	0/0:10,0:10:27.09:0,27,378	0/0:16,0:16:48.16:0,48,664	0/0:26,0:26:75.24:0,75,1028	0/0:27,0:27:81.27:0,81,1132	0/0:17,0:17:51.16:0,51,695	0/0:22,0:22:66.22:0,66,923	0/0:13,0:13:39.13:0,39,545	0/0:23,0:23:69.22:0,69,949	0/0:7,0:7:21.07:0,21,293	0/0:13,0:13:39.12:0,39,530	0/0:15,0:15:45.15:0,45,629	0/0:20,0:20:60.17:0,60,819	0/0:37,0:37:99:0,108,1492	0/0:22,0:22:66.22:0,66,923	0/0:20,0:20:60.20:0,60,832	0/0:17,0:17:51.17:0,51,713	0/0:44,0:44:99:0,132,1831	0/0:15,0:15:45.15:0,45,629	0/0:10,0:10:30.10:0,30,420	0/0:17,0:17:51.17:0,51,713	0/0:20,0:20:60.20:0,60,839	0/1:3,5:8:62.88:158,0,63	0/0:14,0:14:42.11:0,42,566	1/1:0,2:2:6.02:73,6,0
chr10	86275620	.	A	AGCCC	358.51	PASS	AB=0.615;AC=3;AF=0.054;AN=56;BaseQRankSum=5.361;DP=533;FS=1.435;HRun=0;HaplotypeScore=103.3468;InbreedingCoeff=0.4973;MQ=78.53;MQ0=0;MQRankSum=-3.193;QD=35.85;ReadPosRankSum=1.752;VQSLOD=4.0017;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,2767	0/0:8,0:8:24.08:0,24,492	0/0:22,0:21:57.19:0,57,1108	0/0:14,0:14:5.14:0,5,525	0/0:10,0:10:27.09:0,27,566	0/0:17,0:17:48.16:0,48,994	0/0:27,0:27:81.24:0,81,1598	0/0:28,0:28:84.27:0,84,1690	0/0:17,0:17:51.18:0,51,1069	0/0:25,0:25:72.23:0,72,1439	0/0:13,0:13:39.12:0,39,779	0/0:21,0:21:63.22:0,63,1318	0/0:8,0:8:21.07:0,21,440	0/0:13,0:13:39.13:0,39,816	0/0:16,0:16:48.14:0,48,966	0/0:20,0:20:60.21:0,60,1257	0/0:37,0:37:99:0,111,2233	0/0:23,0:23:64.86:0,65,1381	0/0:19,0:19:57.18:0,57,1137	0/0:17,0:17:51.18:0,51,1070	0/0:44,0:44:99:0,132,2727	0/0:17,0:17:45.14:0,45,905	0/0:10,0:10:30.10:0,30,616	0/0:17,0:17:51.18:0,51,1057	0/0:21,0:21:63.20:0,63,1272	0/1:3,5:8:99:316,0,105	0/0:15,0:15:42.14:0,42,875	1/1:0,2:2:6.02:137,6,0
chr10	86275627	.	C	CTA	86.71	PASS	AB=0.643;AC=3;AF=0.054;AN=56;BaseQRankSum=4.546;DP=538;FS=0.000;HRun=0;HaplotypeScore=81.4162;InbreedingCoeff=0.5438;MQ=80.18;MQ0=0;MQRankSum=-4.416;QD=7.88;ReadPosRankSum=3.236;VQSLOD=3.1114;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,2032	0/0:6,0:6:18.06:0,18,293	0/0:20,0:19:57.19:0,57,891	0/0:13,0:13:32.96:0,33,460	0/0:15,0:15:42.09:0,42,626	0/0:19,0:19:54.18:0,54,871	0/0:27,0:27:81.28:0,81,1321	0/0:28,0:28:75.20:0,75,1171	0/0:18,0:18:54.18:0,54,880	0/0:23,0:23:66.23:0,66,1075	0/0:12,0:12:36.12:0,36,587	0/0:21,0:21:63.22:0,63,1026	0/0:8,0:8:24.08:0,24,391	0/0:14,0:14:42.14:0,42,685	0/0:17,0:17:51.17:0,51,806	0/0:21,0:21:63.22:0,63,1028	0/0:38,0:38:99:0,111,1771	0/0:24,0:24:69.24:0,69,1125	0/0:17,0:17:51.13:0,51,797	0/0:17,0:17:51.14:0,51,803	0/0:47,0:47:99:0,132,2151	0/0:15,0:15:45.15:0,45,722	0/0:9,0:9:27.09:0,27,440	0/0:19,0:19:54.18:0,54,880	0/0:20,0:20:54.18:0,54,878	0/1:4,5:9:76.57:120,0,77	0/0:16,0:16:45.15:0,45,714	1/1:0,2:2:6.01:61,6,0
chr10	86275629	.	G	GCACCC	477.60	PASS	AB=0.643;AC=3;AF=0.054;AN=56;BaseQRankSum=4.809;DP=555;FS=0.000;HRun=0;HaplotypeScore=119.5672;InbreedingCoeff=0.5444;MQ=82.35;MQ0=0;MQRankSum=-3.601;QD=43.42;ReadPosRankSum=2.265;VQSLOD=3.2391;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,2817	0/0:6,0:6:18.05:0,18,374	0/0:21,0:21:57.20:0,57,1293	0/0:15,0:15:39.11:0,39,710	0/0:15,0:15:42.13:0,42,880	0/0:17,0:17:51.17:0,51,1146	0/0:28,0:28:84.24:0,84,1782	0/0:28,0:28:84.27:0,84,1715	0/0:18,0:18:54.19:0,54,1258	0/0:24,0:24:66.22:0,66,1453	0/0:13,0:13:36.11:0,36,773	0/0:22,0:22:63.21:0,63,1433	0/0:9,0:9:27.08:0,27,560	0/0:14,0:14:42.14:0,42,956	0/0:17,0:17:51.18:0,51,1187	0/0:21,0:21:63.22:0,63,1468	0/0:37,0:37:99:0,106,2324	0/0:24,0:24:72.21:0,72,1626	0/0:19,0:19:48.14:0,48,993	0/0:20,0:20:51.16:0,51,1119	0/0:47,0:47:99:0,135,2984	0/0:14,0:14:42.14:0,42,977	0/0:12,0:12:27.09:0,27,591	0/0:19,0:19:57.20:0,57,1283	0/0:23,0:23:57.18:0,57,1280	0/1:4,5:9:97.76:403,0,98	0/0:16,0:16:45.14:0,45,989	1/1:0,2:2:6.02:169,6,0
chr10	86276874	.	TA	T	10811.56	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=14.181;DP=654;FS=0.595;HRun=2;HaplotypeScore=66.1227;InbreedingCoeff=0.9987;MQ=84.38;MQ0=0;MQRankSum=-2.564;QD=36.40;ReadPosRankSum=-0.810;VQSLOD=4.9938;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:38:99:1363,105,0	1/1:0,9:9:18.06:234,18,0	0/0:21,0:21:60.20:0,60,861	0/0:20,0:19:39.11:0,39,534	0/0:21,0:21:60.19:0,60,879	0/0:13,0:13:39.13:0,39,584	0/0:32,0:32:96.33:0,96,1439	1/1:0,26:26:72.23:935,72,0	0/0:21,0:21:60.19:0,60,877	1/1:0,28:28:84.23:1067,84,0	1/1:0,17:17:48.16:623,48,0	0/0:29,0:29:87.23:0,87,1277	0/0:23,0:23:69.23:0,69,1033	0/0:31,0:31:90.30:0,90,1331	0/0:29,0:29:87.27:0,87,1263	0/0:24,0:23:69.23:0,69,1033	1/1:0,31:31:78.25:1013,78,0	0/0:25,0:25:72.19:0,72,1013	1/1:0,21:21:63.19:802,63,0	1/1:1,22:23:66.21:857,66,0	1/1:0,45:45:99:1714,132,0	0/0:17,0:17:48.16:0,48,719	0/0:9,0:9:27.09:0,27,404	0/0:19,0:19:54.13:0,54,765	0/0:23,0:23:69.23:0,69,1034	1/1:1,30:31:90.28:1153,90,0	1/1:0,17:17:48.16:623,48,0	1/1:0,11:11:33.11:428,33,0
chr10	86277171	.	AG	A	589.18	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.988;DP=665;FS=3.003;HRun=4;HaplotypeScore=69.3549;InbreedingCoeff=0.9978;MQ=78.99;MQ0=0;MQRankSum=-3.640;QD=24.55;ReadPosRankSum=2.160;VQSLOD=2.5751;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,1578	0/0:13,0:13:39.13:0,39,546	0/0:18,0:18:53.91:0,54,725	0/0:29,0:29:76.89:0,77,991	0/0:24,0:24:72.24:0,72,1006	0/0:18,0:18:54.18:0,54,749	0/0:31,0:31:81.27:0,81,1132	0/0:26,0:26:75.21:0,75,995	0/0:20,0:20:57.15:0,57,753	0/0:25,0:25:72.23:0,72,994	0/0:14,0:14:42.14:0,42,586	0/0:42,0:42:99:0,123,1683	0/0:16,0:16:45.14:0,45,613	0/0:17,0:17:51.15:0,51,682	0/0:35,0:35:99:0,102,1403	0/0:22,0:22:57.19:0,57,798	0/0:32,0:32:90.29:0,90,1241	1/1:0,24:24:57.17:684,57,0	0/0:15,0:15:45.15:0,45,628	0/0:29,0:29:81.27:0,81,1129	0/0:31,0:31:93.30:0,93,1282	0/0:20,0:20:57.19:0,57,796	0/0:18,0:18:54.18:0,54,752	0/0:36,0:36:99:0,105,1391	0/0:17,0:17:45.15:0,45,616	0/0:22,0:22:66.21:0,66,909	0/0:22,0:21:60.16:0,60,785	0/0:8,0:8:24.07:0,24,320
chr10	86278418	.	AG	A	3478.33	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.819;DP=578;FS=0.421;HRun=2;HaplotypeScore=55.8127;InbreedingCoeff=0.9847;MQ=90.68;MQ0=0;MQRankSum=-5.299;QD=37.81;ReadPosRankSum=5.060;VQSLOD=3.8791;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:41:99:1519,117,0	1/1:0,3:3:9.03:117,9,0	0/0:22,0:22:66.11:0,66,920	0/0:25,0:25:66.20:0,66,931	0/0:17,0:17:51.16:0,51,744	0/0:18,0:18:54.18:0,54,808	0/0:25,0:25:72.23:0,72,1060	0/0:27,0:27:78.26:0,78,1150	0/0:28,0:28:84.27:0,84,1240	1/1:0,16:16:48.16:623,48,0	1/1:0,7:7:21.07:273,21,0	0/0:16,0:16:48.15:0,48,699	0/0:19,0:19:57.19:0,57,854	0/0:21,0:21:60.20:0,60,899	0/0:30,0:30:87.29:0,87,1303	0/0:23,0:23:66.22:0,66,989	1/1:1,24:25:74.98:947,75,0	0/0:23,0:23:69.21:0,69,994	0/0:23,0:23:63.21:0,63,944	0/0:10,0:10:30.10:0,30,439	0/0:35,0:34:99:0,99,1413	0/0:15,0:15:45.15:0,45,674	0/0:12,0:12:33.11:0,33,495	0/0:24,0:23:72.24:0,72,1077	0/0:14,0:14:42.14:0,42,630	0/0:26,0:26:78.25:0,78,1148	0/0:25,0:25:69.23:0,69,1031	0/0:8,0:8:24.08:0,24,360
chr10	86278629	.	CAAAAA	C	1811.63	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.544;DP=580;FS=7.218;HRun=13;HaplotypeScore=120.0374;InbreedingCoeff=0.9936;MQ=58.49;MQ0=14;MQRankSum=-7.425;QD=27.87;ReadPosRankSum=4.281;VQSLOD=2.0913;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:64.57:0,65,1289	1/1:1,7:8:15.04:256,15,0	0/0:17,0:10:25.27:0,25,472	0/0:20,0:13:26.99:0,27,467	0/0:20,0:22:60.16:0,60,1407	0/0:26,0:26:78.27:0,78,2005	0/0:25,0:28:69.19:0,69,1632	0/0:21,0:23:63.13:0,63,1510	0/0:13,0:16:39.13:0,39,965	1/1:2,14:16:41.99:657,42,0	1/1:1,10:11:24.07:407,24,0	0/0:17,0:18:48.11:0,48,1085	0/0:13,0:14:30.10:0,30,708	0/0:17,0:16:42.12:0,42,833	0/0:14,0:15:39.13:0,39,946	0/0:26,0:28:75.26:0,75,1879	1/1:10,20:30:39.05:649,39,0	0/0:8,0:28:57.19:0,57,944	0/0:17,0:20:56.68:0,57,1343	0/0:11,0:15:33.07:0,33,760	0/0:22,0:20:54.14:0,54,1264	0/0:15,0:15:36.12:0,36,977	0/0:20,0:24:60.16:0,60,1221	0/0:33,0:31:78.26:0,78,2080	0/0:17,0:19:50.20:0,50,1213	0/0:27,0:25:57.16:0,57,1419	0/0:23,0:24:60.17:0,60,1494	0/0:10,0:9:27.09:0,27,606
chr10	86281901	.	TTTTC	T	2073.44	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=0.094;DP=430;FS=7.146;HRun=0;HaplotypeScore=79.6928;InbreedingCoeff=0.6200;MQ=68.16;MQ0=3;MQRankSum=-3.039;QD=9.78;ReadPosRankSum=-2.025;VQSLOD=1.5719;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:36:83.22:788,83,0	1/1:7,0:7:2.09:21,2,0	0/0:12,0:9:3.23:0,3,30	0/1:18,0:13:4.47:4,0,74	0/0:18,0:18:36.02:0,36,458	0/0:13,0:13:20.79:0,21,390	0/0:22,0:22:30.50:0,31,498	1/1:23,0:22:25.88:235,26,0	0/0:5,0:5:8.97:0,9,110	0/1:22,0:22:22.14:182,0,22	1/1:10,0:9:2.44:73,2,0	0/0:12,0:12:21.01:0,21,240	0/0:11,0:11:20.98:0,21,336	0/0:13,0:13:17.60:0,18,227	0/0:10,0:10:20.96:0,21,283	0/0:17,0:17:39:0,39,523	0/1:26,0:26:99:104,0,187	0/0:16,0:16:39:0,39,489	1/1:7,7:14:17.62:152,18,0	1/1:7,0:7:20.18:157,20,0	1/1:12,1:13:19.22:162,19,0	0/0:11,0:11:15.03:0,15,221	0/0:7,0:7:17.62:0,18,139	0/0:34,0:34:75.13:0,75,1340	0/0:17,0:17:36.05:0,36,522	0/1:15,0:15:7.80:166,0,8	1/1:13,0:12:17.85:149,18,0	1/1:7,0:7:9:77,9,0
chr10	86281917	.	CTTTCTT	C	1751.32	PASS	AB=0.988;AC=15;AF=0.268;AN=56;BaseQRankSum=1.106;DP=426;FS=3.553;HRun=0;HaplotypeScore=93.1209;InbreedingCoeff=-0.0712;MQ=55.02;MQ0=5;MQRankSum=0.427;QD=8.63;ReadPosRankSum=-1.585;VQSLOD=2.0498;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,11:37:97.71:1089,98,0	0/1:3,0:3:13.98:14,0,44	0/0:12,0:5:3.95:0,4,32	0/1:15,0:8:17.20:17,0,92	0/0:17,0:16:40.30:0,40,688	0/0:16,0:15:29.74:0,30,600	0/0:19,0:18:33.32:0,33,719	0/1:25,0:25:99:112,0,109	0/0:5,0:5:13.52:0,14,185	0/1:16,0:16:99:148,0,165	0/1:13,0:12:35.26:35,0,130	0/0:12,0:12:26.86:0,27,375	0/0:10,0:10:29.51:0,30,529	0/0:15,0:15:29.70:0,30,390	0/0:8,0:8:20.96:0,21,367	0/0:19,0:19:50.60:0,51,862	0/1:29,0:30:47.64:48,0,660	0/0:15,0:14:42.02:0,42,764	0/1:11,0:11:35.44:108,0,35	1/1:8,0:8:0.30:96,0,0	0/1:9,0:9:32.59:83,0,33	0/0:10,0:10:24.95:0,25,423	0/0:12,0:12:23.90:0,24,270	0/0:34,0:34:84.72:0,85,2124	0/0:19,0:19:48.01:0,48,873	0/1:20,0:18:84.62:85,0,132	0/1:9,0:8:11.56:57,0,12	0/1:4,0:4:19.23:19,0,32
chr10	86281920	.	TC	T	2597.07	PASS	AB=0.970;AC=25;AF=0.446;AN=56;BaseQRankSum=2.238;DP=430;FS=3.599;HRun=1;HaplotypeScore=57.6582;InbreedingCoeff=0.6144;MQ=52.75;MQ0=6;MQRankSum=-5.640;QD=11.39;ReadPosRankSum=-4.507;VQSLOD=0.1637;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:37:69.81:667,70,0	1/1:4,0:4:10.50:71,10,0	0/1:10,1:4:3.46:3,0,24	0/1:13,1:7:6.70:7,0,71	0/0:17,0:16:36.40:0,36,306	0/0:17,0:16:19.71:0,20,197	0/0:18,0:17:23.76:0,24,238	1/1:23,0:22:6.88:242,7,0	0/0:6,0:6:7.39:0,7,72	1/1:15,1:16:39.59:307,40,0	1/1:10,2:11:20.15:178,20,0	0/1:13,0:13:3.64:4,0,111	0/0:10,0:10:23.53:0,24,218	0/0:14,0:14:7.86:0,8,112	0/0:11,0:11:4.21:0,4,154	0/0:18,0:18:13.07:0,13,216	1/1:31,0:30:62.76:417,63,0	0/0:17,0:16:20.18:0,20,218	0/1:12,0:12:5.86:150,0,6	1/1:9,0:9:24.22:170,24,0	1/1:9,0:9:24.33:188,24,0	0/0:10,0:10:17.38:0,17,144	0/0:13,0:13:7.95:0,8,110	0/0:33,0:33:62.80:0,63,674	0/0:18,0:18:42.34:0,42,352	1/1:20,0:18:3.60:183,4,0	1/1:10,2:10:19.42:144,19,0	0/1:4,0:4:11.52:66,0,12
chr10	86282101	.	GCA	G	217.43	PASS	AB=0.930;AC=11;AF=0.229;AN=48;BaseQRankSum=0.892;DP=473;FS=0.972;HRun=0;HaplotypeScore=66.8254;InbreedingCoeff=-0.1433;MQ=59.50;MQ0=9;MQRankSum=1.578;QD=1.10;ReadPosRankSum=0.606;VQSLOD=1.3989;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:11.72:12,0,59	0/0:9,0:9:9.01:0,9,96	./.	./.	0/0:9,0:9:3.01:0,3,43	0/1:14,2:15:23.49:23,0,79	0/1:22,2:24:7.97:8,0,287	0/0:15,0:13:8.91:0,9,76	0/0:15,0:15:14.92:0,15,153	0/0:12,0:15:18.03:0,18,195	0/0:4,0:4:6:0,6,53	0/1:20,6:24:17.47:17,0,149	0/1:14,0:15:29.09:29,0,79	0/1:16,0:17:90.36:90,0,93	0/0:6,0:6:3.01:0,3,45	0/1:9,0:8:16.66:17,0,156	0/0:14,0:27:30.88:0,31,279	1/1:11,8:20:11.36:111,11,0	0/0:15,0:14:9.01:0,9,94	0/0:7,0:7:3:0,3,26	0/0:58,0:58:21.04:0,21,241	./.	0/1:10,0:11:5.09:5,0,77	0/1:32,2:33:40.18:40,0,372	0/0:5,0:5:6.02:0,6,82	0/0:20,0:19:31.04:0,31,283	0/0:10,0:9:8.99:0,9,87	./.
chr10	86282869	.	GA	G	2672.54	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=8.679;DP=594;FS=1.160;HRun=10;HaplotypeScore=75.3870;InbreedingCoeff=0.9725;MQ=81.88;MQ0=1;MQRankSum=-2.352;QD=13.10;ReadPosRankSum=1.221;VQSLOD=3.7828;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:46:84.84:0,85,464	1/1:0,0:4:6.58:19,7,0	0/0:29,1:29:37.24:0,37,412	0/0:25,0:24:29.59:0,30,355	0/0:17,1:18:13.04:0,13,362	0/0:13,0:13:28:0,28,358	0/0:34,2:36:38.12:0,38,868	1/1:5,26:31:74.92:641,75,0	0/0:30,0:30:78.20:0,78,854	1/1:6,0:23:32.58:96,33,0	1/1:1,0:8:10.98:38,11,0	0/0:27,0:27:72.18:0,72,782	0/0:22,0:22:54.13:0,54,582	0/0:11,0:11:27.03:0,27,273	0/0:20,0:20:51.13:0,51,557	0/0:18,1:19:22.04:0,22,446	1/1:5,0:34:53.76:164,54,0	0/0:23,2:25:17.08:0,17,645	1/1:5,13:18:38.98:339,39,0	1/1:2,13:16:32.01:266,32,0	1/1:5,17:22:38:359,38,0	0/0:13,0:13:33.09:0,33,365	0/0:12,0:12:27.07:0,27,299	0/0:27,1:28:46.12:0,46,728	0/0:14,0:14:39.08:0,39,415	1/1:5,23:28:68.89:584,69,0	1/1:0,13:13:29.99:260,30,0	1/1:0,7:7:15:130,15,0
chr10	86282945	.	G	GAAGTTGTTGAGGAGCA	12458.43	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.323;DP=586;FS=2.747;HRun=0;HaplotypeScore=250.2026;InbreedingCoeff=0.9897;MQ=85.42;MQ0=1;MQRankSum=-12.313;QD=148.31;ReadPosRankSum=-2.378;VQSLOD=4.4884;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:81.26:0,81,3365	1/1:8,3:13:33.11:1972,33,0	0/0:20,0:20:51.17:0,51,1643	0/0:21,0:21:51.17:0,51,1378	0/0:11,0:11:27.05:0,27,1189	0/0:15,0:15:42.14:0,42,1717	0/0:34,0:34:96.30:0,96,3826	0/0:26,0:26:69.22:0,69,2314	0/0:19,0:19:57.18:0,57,2312	1/1:22,4:26:69.23:3943,69,0	1/1:8,2:10:27.09:1370,27,0	0/0:28,0:28:84.24:0,84,3294	0/0:23,0:23:69.24:0,69,3021	0/0:18,0:18:54.17:0,54,2206	0/0:23,0:23:66.23:0,66,2923	0/0:17,0:17:51.18:0,51,2271	1/1:25,7:35:90.23:5174,90,0	0/0:29,0:29:87.27:0,87,3405	0/0:16,0:16:45.15:0,45,1561	0/0:10,0:10:27.09:0,27,1201	0/0:51,0:51:99:0,151,5985	0/0:16,0:16:42.13:0,42,1755	0/0:8,0:8:24.08:0,24,1125	0/0:43,0:43:99:0,123,5431	0/0:16,0:16:45.14:0,45,1873	0/0:14,0:14:42.14:0,42,1843	0/0:11,0:11:27.09:0,27,1042	0/0:4,0:4:12.04:0,12,563
chr10	86282948	.	GGA	G	498.16	PASS	AB=0.812;AC=4;AF=0.071;AN=56;BaseQRankSum=6.414;DP=584;FS=4.140;HRun=0;HaplotypeScore=93.4199;InbreedingCoeff=-0.0779;MQ=84.58;MQ0=1;MQRankSum=-6.953;QD=6.31;ReadPosRankSum=-2.517;VQSLOD=2.4411;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:90.31:0,90,1696	0/1:11,1:12:40.21:40,0,298	0/0:20,0:20:57.16:0,57,1010	0/0:20,0:20:54.04:0,54,826	0/0:11,0:11:27.09:0,27,521	0/0:14,0:14:42.13:0,42,778	0/0:33,0:33:96.28:0,96,1753	0/0:26,0:26:72.20:0,72,1230	0/0:19,0:19:54.17:0,54,1010	0/1:17,9:26:99:281,0,616	0/1:7,2:9:15.94:16,0,153	0/0:28,0:28:81.28:0,81,1554	0/0:24,0:24:72.25:0,72,1376	0/0:20,0:20:60.20:0,60,1104	0/0:24,0:24:72.23:0,72,1341	0/0:17,0:17:51.17:0,51,984	0/1:22,10:32:99:269,0,507	0/0:29,0:29:87.24:0,87,1608	0/0:18,0:18:54.17:0,54,962	0/0:9,0:9:27.09:0,27,513	0/0:53,0:53:99:0,154,2918	0/0:16,0:16:45.15:0,45,867	0/0:8,0:8:21.07:0,21,405	0/0:41,0:41:99:0,123,2339	0/0:15,0:15:45.15:0,45,868	0/0:14,0:14:42.14:0,42,811	0/0:11,0:11:33.11:0,33,635	0/0:4,0:4:12.04:0,12,232
chr10	86283401	.	ACCACAC	A	963.31	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=1.871;DP=521;FS=5.304;HRun=0;HaplotypeScore=123.1345;InbreedingCoeff=0.4227;MQ=62.76;MQ0=18;MQRankSum=-0.745;QD=6.88;ReadPosRankSum=1.165;VQSLOD=2.2601;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:41.93:0,42,523	0/1:6,0:6:31.19:36,0,31	0/0:29,0:13:28.86:0,29,242	0/1:36,0:15:0.57:1,0,156	0/0:10,0:10:27.02:0,27,503	0/0:13,0:13:36.04:0,36,698	0/0:27,0:26:68.94:0,69,893	0/0:22,0:21:60.64:0,61,515	0/0:25,0:25:65.48:0,65,1414	1/1:20,0:20:52.25:423,52,0	1/1:1,5:6:13.28:83,13,0	0/0:17,0:17:45.01:0,45,760	0/0:13,0:13:35.82:0,36,589	0/0:15,0:15:40.77:0,41,497	0/0:12,0:12:29.62:0,30,470	0/1:13,0:13:5.68:6,0,369	1/1:22,0:26:32.07:468,32,0	0/0:26,0:26:59.70:0,60,644	0/0:6,0:6:16.68:0,17,112	0/1:8,0:9:4.34:4,0,109	0/0:44,0:43:27.87:0,28,537	0/0:13,0:12:26.68:0,27,208	0/0:16,0:15:41.04:0,41,616	0/0:40,0:40:99:0,102,1682	0/0:13,0:13:38.99:0,39,672	0/0:13,0:13:38.78:0,39,319	0/1:11,0:11:53.34:84,0,53	0/1:12,0:11:17.77:18,0,109
chr10	86283402	.	CCACACA	C	373.99	PASS	AB=1.000;AC=13;AF=0.250;AN=52;BaseQRankSum=4.529;DP=532;FS=5.991;HRun=0;HaplotypeScore=125.8561;InbreedingCoeff=0.4753;MQ=60.47;MQ0=18;MQRankSum=-2.653;QD=2.60;ReadPosRankSum=1.281;VQSLOD=2.0560;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:28:18.04:0,18,314	0/0:7,0:7:9.50:0,9,128	0/0:28,0:12:0.47:0,0,1	./.	0/0:11,0:11:12.03:0,12,314	0/0:13,0:13:18.06:0,18,447	0/0:25,1:26:3.11:0,3,465	0/1:21,0:20:3.71:4,0,11	0/0:24,0:25:33.98:0,34,981	0/0:21,0:21:6:0,6,52	0/0:7,0:6:1.25:0,1,3	0/0:17,0:17:18.06:0,18,437	0/0:12,0:13:18.02:0,18,325	0/0:15,0:16:9.91:0,10,247	0/0:11,0:13:11.18:0,11,255	0/1:13,0:13:48.42:48,0,224	0/1:27,0:28:25.50:26,0,111	0/0:16,0:26:20.14:0,20,231	1/1:6,0:6:5.88:36,6,0	1/1:6,3:9:5.98:60,6,0	1/1:43,0:42:7.95:124,8,0	./.	0/0:17,0:16:24:0,24,320	0/0:43,0:43:51.98:0,52,1052	0/0:12,0:13:15.05:0,15,379	0/0:13,0:13:2.84:0,3,14	1/1:5,6:12:8.60:162,9,0	1/1:6,5:11:3.90:62,4,0
chr10	86284929	.	A	AT	7652.78	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=7.038;DP=565;FS=9.496;HRun=8;HaplotypeScore=74.0023;InbreedingCoeff=0.9658;MQ=70.06;MQ0=0;MQRankSum=-2.277;QD=27.43;ReadPosRankSum=-0.261;VQSLOD=4.9545;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,41:46:99:1344,119,0	1/1:0,5:5:15.04:173,15,0	0/0:15,0:13:13.81:0,14,173	0/0:12,0:12:24.01:0,24,218	0/0:14,0:14:30.01:0,30,275	0/0:20,0:20:54.01:0,54,489	0/0:19,0:19:45:0,45,407	1/1:9,26:35:75.22:865,75,0	0/0:25,0:25:69.03:0,69,631	1/1:0,9:10:29.92:326,30,0	1/1:7,11:18:2.65:284,3,0	0/0:19,0:19:54.02:0,54,494	0/0:25,0:25:72.01:0,72,653	0/0:9,0:9:24.01:0,24,220	0/0:21,0:21:51:0,51,462	0/0:23,0:23:60.02:0,60,549	1/1:2,26:28:69.21:796,69,0	0/0:26,0:26:69.03:0,69,631	1/1:5,18:23:57.13:639,57,0	1/1:2,20:22:57.13:643,57,0	1/1:2,15:17:36.11:416,36,0	0/0:12,0:12:23.98:0,24,216	0/0:7,0:7:15.01:0,15,137	0/0:24,0:24:68.99:0,69,623	0/0:15,0:15:32.99:0,33,296	1/1:6,19:25:60.01:672,60,0	1/1:2,25:27:72.17:816,72,0	1/1:3,20:23:61.37:679,61,0
chr10	86285267	.	C	CA	2480.18	PASS	AB=0.913;AC=11;AF=0.196;AN=56;BaseQRankSum=-5.092;DP=587;FS=2.552;HRun=9;HaplotypeScore=57.2087;InbreedingCoeff=0.8258;MQ=67.61;MQ0=10;MQRankSum=0.317;QD=19.53;ReadPosRankSum=2.165;VQSLOD=4.2475;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:36:87:928,87,0	1/1:1,6:7:18.05:199,18,0	0/0:23,0:15:23.84:0,24,207	0/0:19,0:9:17.99:0,18,156	0/0:18,0:18:44.96:0,45,384	0/0:19,1:21:19.84:0,20,389	0/0:20,0:22:55.06:0,55,455	0/0:30,0:30:74.94:0,75,644	0/0:15,0:15:38.97:0,39,335	1/1:6,14:21:44.94:470,45,0	1/1:2,8:10:21.02:219,21,0	0/0:26,0:26:65.94:0,66,568	0/0:20,0:21:59.03:0,59,501	0/1:18,2:21:16.35:16,0,317	0/0:25,0:25:68.97:0,69,595	0/0:18,0:18:44.98:0,45,388	1/1:2,28:32:77.88:825,78,0	0/0:19,0:19:44.99:0,45,391	0/0:23,0:25:70.06:0,70,585	0/0:12,0:12:35.98:0,36,309	0/0:25,0:25:65.91:0,66,561	0/0:15,0:15:2.56:0,3,181	0/0:17,0:17:38.98:0,39,338	0/0:21,0:21:50.98:0,51,443	0/0:27,0:27:71.95:0,72,617	0/0:13,1:14:5.81:0,6,279	0/0:33,1:34:50.77:0,51,666	0/0:13,0:13:29.94:0,30,253
chr10	86285500	.	CCTT	C	3095.31	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.843;DP=729;FS=0.985;HRun=0;HaplotypeScore=103.5451;InbreedingCoeff=0.9999;MQ=86.88;MQ0=0;MQRankSum=-3.589;QD=39.18;ReadPosRankSum=1.722;VQSLOD=4.8803;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.28:0,87,1883	1/1:1,13:14:32.81:538,33,0	0/0:26,0:26:63.65:0,64,1244	0/0:27,0:27:57.19:0,57,1195	0/0:24,0:24:69.24:0,69,1541	0/0:20,0:20:60.19:0,60,1285	0/0:30,0:30:87.28:0,87,1833	0/0:43,0:43:99:0,117,2515	0/0:25,0:25:72.25:0,72,1592	1/1:0,23:23:66.21:1054,66,0	1/1:0,19:19:48.16:783,48,0	0/0:28,0:28:84.29:0,84,1858	0/0:20,0:20:60.18:0,60,1234	0/0:29,0:29:84.29:0,84,1876	0/0:36,0:36:99:0,99,2153	0/0:39,0:39:99:0,111,2440	1/1:4,19:23:54.18:881,54,0	0/0:22,0:22:63.18:0,63,1361	0/0:20,0:20:54.16:0,54,1067	0/0:37,0:37:99:0,111,2420	0/0:29,0:29:84.26:0,84,1766	0/0:22,0:22:66.23:0,66,1470	0/0:18,0:18:54.19:0,54,1181	0/0:19,0:19:57.20:0,57,1273	0/0:22,0:22:63.22:0,63,1407	0/0:18,0:18:54.19:0,54,1207	0/0:48,0:48:99:0,138,3054	0/0:17,0:17:48.16:0,48,984
chr10	86286083	.	AG	A	269.55	PASS	AB=0.500;AC=27;AF=0.794;AN=34;BaseQRankSum=0.639;DP=55;FS=0.000;HRun=1;HaplotypeScore=33.6464;InbreedingCoeff=0.1729;MQ=44.26;MQ0=0;MQRankSum=-1.734;QD=7.09;ReadPosRankSum=1.552;VQSLOD=0.6058;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:2.97:20,3,0	./.	0/0:0,0:1:0.89:0,1,2	./.	./.	1/1:0,1:1:2.90:16,3,0	./.	1/1:0,1:1:2.97:20,3,0	1/1:0,3:3:5.90:39,6,0	0/0:0,2:2:0:0,0,0	1/1:0,4:4:2.96:19,3,0	./.	1/1:0,4:4:8.89:58,9,0	0/1:0,3:3:0:0,0,0	./.	1/1:0,2:2:2.94:18,3,0	1/1:0,3:3:2.94:18,3,0	1/1:0,2:2:5.94:41,6,0	1/1:0,1:1:2.97:20,3,0	1/1:0,1:1:2.90:16,3,0	0/0:0,3:3:0:0,0,0	./.	./.	./.	./.	1/1:0,5:5:2.18:19,2,0	1/1:0,3:3:5.92:39,6,0	./.
chr10	86286756	.	TTC	T	1278.99	PASS	AB=0.884;AC=29;AF=0.604;AN=48;BaseQRankSum=-1.844;DP=467;FS=1.093;HRun=0;HaplotypeScore=78.6616;InbreedingCoeff=0.2998;MQ=61.71;MQ0=29;MQRankSum=3.210;QD=4.43;ReadPosRankSum=0.496;VQSLOD=2.2139;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:2.99:0,3,23	./.	./.	0/1:34,0:12:0:0,0,0	1/1:8,2:8:3:33,3,0	0/1:9,5:11:51.32:51,0,53	1/1:14,9:18:6.01:66,6,0	0/0:21,0:18:7.84:0,8,31	1/1:12,6:18:11.71:113,12,0	0/0:19,0:19:19.02:0,19,178	0/0:6,0:6:2.58:0,3,23	1/1:8,6:15:20.54:193,21,0	0/1:7,2:8:3.89:28,0,4	./.	1/1:6,5:12:11.86:113,12,0	0/1:7,11:18:3.60:180,0,4	0/0:17,0:16:12.57:0,13,84	0/0:10,0:17:4.98:0,5,66	0/1:19,0:15:14.82:28,0,15	0/1:6,0:6:9.05:27,0,9	./.	1/1:10,7:14:12.03:133,12,0	1/1:10,6:14:12.50:134,13,0	1/1:14,14:26:10.87:190,11,0	1/1:6,3:8:6.01:66,6,0	0/1:12,0:12:8.10:8,0,24	1/1:19,0:18:8.59:40,9,0	1/1:9,0:9:5.72:29,6,0
chr10	86286784	.	CTCTCTCTCTCTGTCTG	C	3183.46	PASS	AB=0.822;AC=13;AF=0.232;AN=56;BaseQRankSum=4.947;DP=468;FS=0.000;HRun=0;HaplotypeScore=162.4342;InbreedingCoeff=0.3859;MQ=50.07;MQ0=27;MQRankSum=-4.988;QD=18.62;ReadPosRankSum=-2.633;VQSLOD=2.2244;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:22:99:295,0,201	0/0:1,0:1:3.01:0,3,42	0/0:10,0:1:3.01:0,3,31	0/0:13,0:1:3.01:0,3,53	0/0:9,0:8:18.04:0,18,595	0/0:14,0:11:21.05:0,21,593	0/0:28,0:23:39.06:0,39,1196	1/1:24,0:22:53.47:721,53,0	0/0:22,0:22:51.17:0,51,1629	0/0:11,0:10:26.95:0,27,405	0/0:2,0:2:6.02:0,6,97	0/0:15,0:15:36.58:0,37,1344	0/0:20,0:20:45.15:0,45,1439	0/0:10,0:10:21.07:0,21,769	0/0:13,0:12:30.10:0,30,1154	0/0:27,0:25:54.08:0,54,1937	0/1:20,0:19:99:286,0,184	0/0:23,0:22:51.12:0,51,1764	1/1:8,12:15:38.88:868,39,0	0/1:3,4:7:19.37:94,0,19	0/1:4,25:28:16.98:30,0,17	0/0:14,0:12:18.06:0,18,832	0/0:13,0:12:21.05:0,21,834	0/0:41,0:39:79.58:0,80,2741	0/0:11,0:9:24.08:0,24,820	0/1:14,1:15:27.43:420,0,27	1/1:4,16:19:14.91:420,15,0	1/1:2,10:12:5.84:220,6,0
chr10	86286794	.	CTGTCTG	C	2521.19	PASS	AB=1.000;AC=21;AF=0.389;AN=54;BaseQRankSum=7.500;DP=464;FS=0.480;HRun=0;HaplotypeScore=111.3588;InbreedingCoeff=0.7883;MQ=52.62;MQ0=20;MQRankSum=-2.715;QD=14.57;ReadPosRankSum=-1.134;VQSLOD=2.6956;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:34.80:536,35,0	./.	0/0:8,0:6:18.05:0,18,257	0/0:7,0:5:9.83:0,10,108	0/0:9,0:7:9.03:0,9,191	0/0:14,0:12:14.10:0,14,339	0/0:31,0:27:32.55:0,33,741	1/1:9,19:26:24.40:686,24,0	0/0:23,0:23:54:0,54,858	0/1:10,0:9:30.77:38,0,31	1/1:2,0:2:3:26,3,0	0/0:15,0:15:11.79:0,12,561	0/0:18,0:18:45.15:0,45,702	0/0:10,0:10:24.08:0,24,479	0/0:18,0:17:42.14:0,42,743	0/0:30,0:28:41.03:0,41,1014	1/1:17,0:18:26.16:332,26,0	0/0:23,0:22:48.16:0,48,931	1/1:17,0:15:16.46:426,16,0	1/1:6,0:6:6.12:32,6,0	1/1:27,0:26:3.01:36,3,0	0/0:15,0:13:18.06:0,18,300	0/0:14,0:13:7.73:0,8,404	0/0:39,0:37:68.28:0,68,1343	0/0:17,0:14:33.04:0,33,486	1/1:10,0:10:16.43:350,16,0	1/1:19,0:18:11.52:158,12,0	1/1:11,0:11:5.57:100,6,0
chr10	86286891	.	CAA	C	1434.04	PASS	AB=0.563;AC=9;AF=0.161;AN=56;BaseQRankSum=7.427;DP=519;FS=26.365;HRun=14;HaplotypeScore=72.3030;InbreedingCoeff=0.8350;MQ=60.70;MQ0=2;MQRankSum=-0.465;QD=14.63;ReadPosRankSum=5.073;VQSLOD=0.5703;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:34:71.30:308,71,0	0/1:2,7:9:18.17:146,0,18	0/0:13,0:8:8.24:0,8,80	0/0:8,0:5:8.13:0,8,56	0/0:19,0:25:56.65:0,57,703	0/0:21,0:28:70.14:0,70,800	0/0:22,0:23:54.06:0,54,648	0/0:19,0:20:47.60:0,48,587	0/0:14,0:15:35.59:0,36,451	1/1:1,14:15:44.42:397,44,0	1/1:4,13:19:35.58:364,36,0	0/0:14,0:14:39.04:0,39,467	0/0:10,0:12:26.06:0,26,301	0/0:8,0:8:18.03:0,18,218	0/0:16,0:16:39.12:0,39,529	0/0:23,0:26:68.15:0,68,842	1/1:2,17:20:44.48:385,44,0	0/0:6,0:24:43.92:0,44,215	0/0:17,0:19:41.52:0,42,477	0/0:9,0:9:21.06:0,21,277	0/0:11,0:11:23.99:0,24,278	0/0:11,0:15:40.56:0,41,440	0/0:24,0:25:62.24:0,62,744	0/0:23,1:26:32.42:0,32,744	0/0:16,0:16:39.03:0,39,486	0/0:24,1:29:37.87:0,38,727	0/0:21,0:22:62.67:0,63,810	0/0:12,0:15:38.10:0,38,480
chr10	86288717	.	C	CG	763.59	PASS	AB=0.938;AC=9;AF=0.161;AN=56;BaseQRankSum=-2.672;DP=384;FS=2.843;HRun=7;HaplotypeScore=45.3610;InbreedingCoeff=0.7461;MQ=70.97;MQ0=0;MQRankSum=-1.057;QD=13.17;ReadPosRankSum=1.170;VQSLOD=2.4047;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:48.08:0,48,462	1/1:2,2:4:3.01:36,3,0	0/0:8,0:8:24.04:0,24,231	0/0:9,0:8:0.40:0,0,70	0/0:11,0:11:18.01:0,18,168	0/0:18,0:18:39.05:0,39,374	0/0:30,0:30:72.02:0,72,677	0/0:16,0:16:20.89:0,21,172	0/0:9,0:9:26.99:0,27,244	1/1:4,9:13:24.07:289,24,0	1/1:2,5:7:11.89:145,12,0	0/0:11,0:11:27.04:0,27,260	0/0:8,0:8:20.99:0,21,188	0/0:12,0:12:23.99:0,24,218	0/0:8,0:8:22.83:0,23,197	0/0:13,0:13:30.04:0,30,286	1/1:2,17:19:36.11:435,36,0	0/0:26,0:26:59.67:0,60,540	0/0:13,0:12:26.98:0,27,241	0/0:11,0:11:17.97:0,18,163	0/0:34,0:34:77.93:0,78,724	0/0:8,0:8:12.01:0,12,111	0/0:11,0:11:15.02:0,15,145	0/0:15,0:15:39.05:0,39,371	0/0:13,0:13:27.04:0,27,259	0/1:14,1:15:9.20:9,0,204	0/0:13,0:13:33.03:0,33,310	0/0:7,0:7:18.02:0,18,172
chr10	86290741	.	TTCTCTCTCTC	T	1182.37	PASS	AB=0.980;AC=17;AF=0.340;AN=50;BaseQRankSum=5.619;DP=540;FS=19.516;HRun=0;HaplotypeScore=165.8696;InbreedingCoeff=0.5113;MQ=72.15;MQ0=9;MQRankSum=-2.161;QD=7.99;ReadPosRankSum=2.389;VQSLOD=1.6243;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,1:29:6:152,6,0	0/1:3,0:3:13.97:39,0,14	./.	0/0:22,0:14:0.47:0,0,1	0/0:19,0:19:6.02:0,6,182	0/0:21,0:21:21.01:0,21,607	0/0:14,0:13:9.03:0,9,257	./.	0/0:20,0:20:30.09:0,30,1074	1/1:15,0:15:9.20:145,9,0	1/1:10,0:10:6.01:144,6,0	0/0:25,0:24:12.66:0,13,391	0/0:23,0:23:33.58:0,34,1154	0/0:27,0:27:21.07:0,21,780	0/0:18,0:19:15.05:0,15,448	0/0:23,0:23:27.96:0,28,805	0/1:15,0:16:25.98:26,0,182	0/0:22,0:22:39.13:0,39,1574	./.	1/1:10,0:13:0.46:1,0,0	0/0:21,0:21:0:0,0,0	0/0:22,0:21:9.03:0,9,286	0/1:10,0:9:11.33:11,0,103	0/0:33,0:32:18.53:0,19,600	0/0:21,0:21:6.02:0,6,212	1/1:17,0:22:24.08:535,24,0	1/1:10,5:16:9.03:218,9,0	1/1:10,0:12:3.01:69,3,0
chr10	86291693	.	TGGGGGC	T	152.04	PASS	AB=0.875;AC=12;AF=0.273;AN=44;BaseQRankSum=-0.369;DP=109;FS=1.802;HRun=0;HaplotypeScore=27.4017;InbreedingCoeff=0.4467;MQ=101.89;MQ0=0;MQRankSum=-1.285;QD=6.08;ReadPosRankSum=2.259;VQSLOD=1.0573;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:9:10.79:101,11,0	0/1:0,0:1:0:0,0,0	0/0:17,0:12:29.23:0,29,414	0/0:10,0:8:4.63:0,5,60	0/1:2,0:2:0.01:0,0,0	0/0:3,0:3:2.97:0,3,20	0/0:5,0:5:7.81:0,8,96	0/1:2,0:2:0:0,0,0	0/0:2,0:2:6:0,6,83	1/1:3,0:3:8.98:76,9,0	./.	0/0:1,0:1:3.01:0,3,38	0/0:1,0:1:3.01:0,3,60	0/0:2,0:2:5.97:0,6,87	0/0:2,0:3:3:0,3,69	0/0:3,0:3:5.99:0,6,50	./.	0/0:5,0:5:5.92:0,6,39	1/1:3,0:3:2.97:20,3,0	0/0:2,0:2:0.46:0,0,1	./.	0/1:2,0:2:0:0,0,0	./.	0/0:5,0:5:5.97:0,6,83	0/0:6,0:6:5.97:0,6,78	./.	1/1:0,3:3:3.01:68,3,0	./.
chr10	86295002	.	GT	G	2130.25	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.762;DP=606;FS=4.953;HRun=1;HaplotypeScore=64.6495;InbreedingCoeff=0.9985;MQ=90.51;MQ0=0;MQRankSum=-3.250;QD=25.67;ReadPosRankSum=3.262;VQSLOD=3.6400;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,121,1531	1/1:0,8:8:21.05:222,21,0	0/0:29,0:29:87.26:0,87,1139	0/0:23,0:23:60.07:0,60,727	0/0:22,0:22:66.17:0,66,845	0/0:15,0:15:45.10:0,45,559	0/0:29,0:29:84.20:0,84,1061	0/0:32,0:32:84.22:0,84,1092	0/0:18,0:18:54.13:0,54,694	1/1:5,18:23:60.14:629,60,0	1/1:3,14:17:45.05:456,45,0	0/0:22,0:22:66.20:0,66,880	0/0:23,0:23:69.18:0,69,910	0/0:14,0:14:42.14:0,42,570	0/0:16,0:16:48.15:0,48,637	0/0:18,0:18:54.09:0,54,636	1/1:1,34:35:93.23:984,93,0	0/0:24,0:24:69.17:0,69,885	0/0:23,0:23:69.09:0,69,880	0/0:18,0:18:54.14:0,54,699	0/0:36,0:36:99:0,102,1254	0/0:16,0:16:48.13:0,48,618	0/0:16,0:16:48.13:0,48,608	0/0:16,0:16:33.08:0,33,521	0/0:22,0:22:66.19:0,66,863	0/0:25,0:25:72.11:0,72,901	0/0:9,0:9:27.09:0,27,367	0/0:14,0:14:42.14:0,42,568
chr10	86295290	.	TC	T	1856.27	PASS	AB=0.955;AC=12;AF=0.214;AN=56;BaseQRankSum=7.699;DP=435;FS=1.528;HRun=9;HaplotypeScore=51.4391;InbreedingCoeff=0.8122;MQ=84.91;MQ0=0;MQRankSum=-0.092;QD=16.14;ReadPosRankSum=0.566;VQSLOD=3.6246;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,25:34:75.03:686,75,0	1/1:1,5:6:15.01:137,15,0	0/0:17,1:17:5.91:0,6,230	0/1:14,0:15:10.94:11,0,108	0/0:15,0:15:42.09:0,42,471	0/0:24,0:24:60.17:0,60,683	0/0:3,0:16:34.09:0,34,173	0/0:17,0:17:27.04:0,27,289	0/0:9,0:9:18.05:0,18,204	1/1:1,10:11:29.98:264,30,0	1/1:1,10:11:27.01:247,27,0	0/0:17,0:17:48.13:0,48,546	0/0:8,0:8:24.07:0,24,277	0/1:9,1:10:0.39:0,0,245	0/0:16,0:16:48.14:0,48,554	0/0:16,0:16:45.13:0,45,518	1/1:1,27:28:75.04:686,75,0	0/0:14,0:14:36.07:0,36,402	0/0:16,0:16:33.08:0,33,365	0/0:16,0:16:39.12:0,39,450	0/0:26,0:26:69.19:0,69,786	0/0:8,0:8:18.05:0,18,207	0/0:10,0:10:21.06:0,21,242	0/0:15,0:15:33.10:0,33,381	0/0:13,0:13:36.09:0,36,397	0/0:22,0:22:54.16:0,54,623	0/0:10,0:10:27.07:0,27,301	0/0:12,0:13:35.96:0,36,384
chr10	86299274	.	CG	C	560.78	PASS	AB=0.843;AC=28;AF=0.560;AN=50;BaseQRankSum=-1.585;DP=181;FS=28.830;HRun=12;HaplotypeScore=30.0284;InbreedingCoeff=0.4154;MQ=94.82;MQ0=1;MQRankSum=-1.094;QD=5.14;ReadPosRankSum=3.689;VQSLOD=-0.0227;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,0:1:1.55:4,2,0	0/0:19,0:14:14.85:0,15,84	0/0:11,0:8:11.87:0,12,87	1/1:3,2:5:7.96:46,8,0	1/1:2,4:6:0.58:19,1,0	0/1:11,2:14:0.11:94,0,0	1/1:7,0:7:2.98:23,3,0	1/1:6,1:8:7.97:52,8,0	./.	0/0:4,0:4:6.01:0,6,58	0/0:7,0:7:5.89:0,6,39	0/1:6,0:6:28.73:46,0,29	1/1:4,0:4:5.27:29,5,0	1/1:8,1:9:14.05:73,14,0	1/1:2,9:11:8.97:70,9,0	0/0:9,0:9:9.01:0,9,84	1/1:9,0:18:15.02:58,15,0	0/1:3,1:4:14.21:14,0,50	0/0:1,0:1:2.97:0,3,20	0/0:4,0:4:3.01:0,3,30	1/1:2,0:2:2.98:23,3,0	0/1:2,1:3:2.77:12,0,3	1/1:5,1:7:13.63:86,14,0	1/1:1,3:4:8.96:70,9,0	0/0:5,0:5:3.01:0,3,30	0/0:5,0:5:5.93:0,6,30	./.
chr10	86300040	.	GGA	G	89.44	PASS	AB=1.000;AC=7;AF=0.159;AN=44;BaseQRankSum=3.229;DP=226;FS=12.056;HRun=0;HaplotypeScore=36.3829;InbreedingCoeff=0.3636;MQ=80.43;MQ0=9;MQRankSum=-0.372;QD=1.28;ReadPosRankSum=1.169;VQSLOD=-0.0729;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:9:0,9,99	0/0:1,1:2:0:0,0,0	0/0:45,0:18:16.15:0,16,191	0/1:54,0:24:18.31:18,0,228	0/0:2,0:2:3.01:0,3,50	./.	./.	0/0:7,0:7:5.85:0,6,100	0/0:6,0:6:12.04:0,12,196	1/1:4,2:6:9.03:109,9,0	./.	0/0:5,0:5:9.03:0,9,132	0/0:5,0:5:3.01:0,3,50	0/0:5,0:5:6.02:0,6,98	0/0:4,0:4:9.03:0,9,139	0/0:6,0:6:9.03:0,9,150	1/1:7,0:7:3.01:37,3,0	0/0:5,0:5:3.01:0,3,39	1/1:2,1:3:3.01:38,3,0	./.	0/0:9,0:9:15.05:0,15,245	0/0:11,1:12:17.42:0,17,251	./.	0/0:7,0:6:9.03:0,9,150	0/0:2,0:2:3.01:0,3,50	0/0:6,0:6:6.02:0,6,99	0/0:4,0:4:6.02:0,6,100	./.
chr10	86300068	.	GAAGAGGA	G	392.44	PASS	AB=1.000;AC=9;AF=0.196;AN=46;BaseQRankSum=1.459;DP=176;FS=4.337;HRun=0;HaplotypeScore=42.9038;InbreedingCoeff=0.2504;MQ=91.07;MQ0=11;MQRankSum=-1.187;QD=6.13;ReadPosRankSum=-0.383;VQSLOD=1.1521;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:8.98:0,9,202	./.	0/1:43,0:13:59.27:59,0,322	0/0:40,0:17:22.72:0,23,388	0/0:2,0:2:3.48:0,3,94	0/0:3,0:3:9.03:0,9,259	0/0:8,0:8:17.90:0,18,410	0/0:7,0:7:11.68:0,12,193	0/0:3,0:3:1.72:0,2,4	1/1:0,5:6:3.60:113,4,0	1/1:2,2:6:6.02:121,6,0	0/1:4,0:4:63.46:63,0,84	0/0:1,0:1:3.01:0,3,80	0/1:2,0:2:17.29:17,0,89	0/0:3,0:3:6.02:0,6,193	0/0:6,0:6:18.06:0,18,564	1/1:1,1:3:4.14:143,4,0	0/0:3,0:4:8.10:0,8,265	./.	./.	0/0:5,0:4:9.03:0,9,150	0/0:8,0:8:17.92:0,18,569	0/0:2,0:2:2.81:0,3,94	0/0:1,0:1:3.01:0,3,92	0/0:6,0:6:15.05:0,15,447	./.	0/0:4,0:4:8.96:0,9,131	./.
chr10	86302610	.	A	AC	561.78	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.387;DP=705;FS=0.000;HRun=7;HaplotypeScore=107.1177;InbreedingCoeff=0.8893;MQ=62.53;MQ0=7;MQRankSum=-4.021;QD=7.11;ReadPosRankSum=-1.981;VQSLOD=0.3926;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:83.56:0,84,790	1/1:7,1:7:2.97:20,3,0	0/0:30,0:18:31.88:0,32,263	0/0:37,0:25:22.34:0,22,290	0/0:17,0:17:45.07:0,45,434	0/0:15,0:15:39.06:0,39,376	0/0:31,0:31:64.37:0,64,633	0/0:25,0:25:36.02:0,36,346	0/0:16,0:16:45.06:0,45,427	1/1:22,2:24:46.11:420,46,0	1/1:13,0:13:2.73:26,3,0	0/0:32,0:32:81.12:0,81,781	0/0:18,0:18:51.06:0,51,484	0/0:27,0:27:69.10:0,69,665	0/0:26,0:26:62.96:0,63,587	0/0:34,0:33:93.14:0,93,895	1/1:32,1:34:29.62:236,30,0	0/0:23,0:22:62.82:0,63,571	0/0:21,0:21:57.08:0,57,542	0/0:19,0:19:38.71:0,39,374	0/0:50,0:50:99:0,108,1034	0/0:18,0:18:41.99:0,42,394	0/0:14,0:14:33.01:0,33,304	0/0:45,0:45:99:0,120,1113	0/0:29,0:29:72.07:0,72,682	0/0:27,0:27:40.98:0,41,525	0/0:20,0:19:57.07:0,57,540	0/0:7,0:7:18.03:0,18,173
chr10	86302616	.	C	CCCT	1292.16	PASS	AB=0.964;AC=9;AF=0.161;AN=56;BaseQRankSum=7.784;DP=738;FS=1.414;HRun=0;HaplotypeScore=139.5015;InbreedingCoeff=0.7617;MQ=58.35;MQ0=15;MQRankSum=-5.538;QD=11.44;ReadPosRankSum=-2.782;VQSLOD=3.0566;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:86.45:0,86,1249	1/1:10,0:9:2.97:20,3,0	0/0:32,0:13:32.99:0,33,419	0/0:39,0:20:5.39:0,5,455	0/0:20,0:20:54.09:0,54,726	0/0:16,0:16:45.09:0,45,652	0/0:31,0:31:79.95:0,80,1145	0/0:24,0:24:44.99:0,45,552	0/0:17,0:17:51.13:0,51,690	1/1:13,1:30:61.30:797,61,0	1/1:5,5:11:2.95:19,3,0	0/0:30,0:30:87.22:0,87,1247	0/0:17,0:17:50.52:0,51,737	0/0:28,0:28:77.98:0,78,1130	0/0:27,0:27:74.77:0,75,1007	0/0:35,0:34:98.12:0,98,1467	1/1:8,25:34:25.01:593,25,0	0/0:27,0:26:72.19:0,72,964	0/0:21,0:20:57.07:0,57,752	0/0:20,0:20:40.75:0,41,599	0/0:53,0:53:99:0,114,1594	0/0:19,0:17:43.67:0,44,624	0/0:17,0:17:38.12:0,38,493	0/0:49,0:48:99:0,115,1838	0/0:27,0:27:74.43:0,74,1040	0/1:26,1:26:5.72:6,0,866	0/0:22,0:21:59.86:0,60,826	0/0:8,0:8:23.87:0,24,263
chr10	86302624	.	TCA	T	3174.22	PASS	AB=0.917;AC=26;AF=0.481;AN=54;BaseQRankSum=4.432;DP=796;FS=0.408;HRun=0;HaplotypeScore=121.7765;InbreedingCoeff=0.3666;MQ=54.49;MQ0=21;MQRankSum=1.849;QD=6.56;ReadPosRankSum=-1.277;VQSLOD=2.8761;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,35:53:41.82:462,42,0	./.	0/0:56,0:16:15.01:0,15,148	0/1:55,0:19:1.64:2,0,160	0/0:19,0:19:24.06:0,24,330	0/1:17,2:19:16.92:17,0,516	0/1:33,0:33:36.97:37,0,623	1/1:15,1:18:29.67:251,30,0	0/0:18,0:18:33.08:0,33,447	0/1:22,0:25:25.36:62,0,25	1/1:10,0:10:5.70:46,6,0	0/0:36,0:36:45.37:0,45,860	0/0:18,1:20:7.44:0,7,504	0/0:27,1:28:22.43:0,22,730	0/0:28,0:28:63.15:0,63,830	0/1:33,3:35:50.71:51,0,854	0/0:30,0:28:4.70:0,5,81	1/1:20,7:27:48.13:496,48,0	1/1:13,6:18:11.98:266,12,0	1/1:12,11:22:7.69:131,8,0	0/1:22,36:58:8.98:485,0,9	0/0:18,0:16:27.04:0,27,349	0/1:18,0:20:41.89:42,0,214	0/0:51,1:50:38.69:0,39,1307	0/1:29,0:29:33:33,0,409	1/1:11,17:28:50.51:536,51,0	1/1:6,15:22:36.35:381,36,0	1/1:5,0:5:6.02:69,6,0
chr10	86302655	.	G	GCA	1752.87	PASS	AB=0.833;AC=7;AF=0.125;AN=56;BaseQRankSum=4.387;DP=1053;FS=0.572;HRun=0;HaplotypeScore=160.5683;InbreedingCoeff=0.7594;MQ=52.29;MQ0=40;MQRankSum=-1.564;QD=21.38;ReadPosRankSum=0.831;VQSLOD=3.6357;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:84.16:0,84,1013	1/1:0,10:9:6.02:99,6,0	0/0:120,0:31:71.85:0,72,767	0/0:129,0:29:60.71:0,61,662	0/0:18,0:18:47.74:0,48,569	0/0:27,0:27:69.17:0,69,843	0/0:41,0:41:87.09:0,87,1047	0/0:39,0:39:90.18:0,90,1080	0/0:25,0:25:60.18:0,60,735	1/1:20,10:29:67.43:1011,67,0	0/1:12,3:15:16.46:276,0,16	0/0:42,0:41:99:0,102,1217	0/0:26,0:26:65.41:0,65,778	0/0:33,0:34:84.06:0,84,998	0/0:32,0:32:81.23:0,81,981	0/0:41,0:40:99:0,99,1215	1/1:13,14:23:33.11:509,33,0	0/0:28,0:26:63.65:0,64,773	0/0:26,0:27:35.81:0,36,588	0/0:20,0:19:26.51:0,27,337	0/0:84,0:83:99:0,150,1849	0/0:13,0:13:33.10:0,33,408	0/0:15,0:15:30.05:0,30,360	0/0:69,0:67:99:0,159,1934	0/0:23,0:23:5.87:0,6,484	0/0:30,0:30:41.92:0,42,907	0/0:26,0:25:51.46:0,51,606	0/0:4,0:4:9.03:0,9,113
chr10	86302823	.	GCACA	G	3118.81	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.746;DP=1161;FS=3.562;HRun=0;HaplotypeScore=209.6883;InbreedingCoeff=0.9888;MQ=66.39;MQ0=11;MQRankSum=-0.864;QD=36.69;ReadPosRankSum=2.511;VQSLOD=3.9056;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:54:99:0,147,3563	1/1:1,17:18:32.75:611,33,0	0/0:73,0:41:48.10:0,48,1775	0/0:92,0:47:89.85:0,90,1761	0/0:18,0:18:54.15:0,54,1319	0/0:23,0:23:60.21:0,60,1557	0/0:47,0:47:99:0,126,3069	0/0:42,0:42:99:0,113,2761	0/0:28,0:28:81.28:0,81,2061	1/1:2,28:30:81.14:1387,81,0	1/1:1,11:12:10.85:273,11,0	0/0:59,0:59:99:0,168,4331	0/0:37,0:37:99:0,108,2643	0/0:54,0:54:99:0,150,3736	0/0:46,0:46:99:0,135,3207	0/0:45,0:45:99:0,129,3117	1/1:0,25:25:54.14:1005,54,0	0/0:28,0:27:72.17:0,72,1659	0/0:22,0:22:60.15:0,60,1373	0/0:22,0:22:60.17:0,60,1418	0/0:149,0:148:99:0,412,9919	0/0:25,0:25:66.20:0,66,1697	0/0:22,0:22:60.21:0,60,1589	0/0:75,0:75:99:0,201,4818	0/0:23,0:23:66.21:0,66,1659	0/0:36,0:36:99:0,102,2648	0/0:35,0:35:99:0,102,2406	0/0:17,0:17:51.09:0,51,1122
chr10	86302905	.	GCA	G	755.80	PASS	AB=0.911;AC=23;AF=0.442;AN=52;BaseQRankSum=9.005;DP=1006;FS=0.968;HRun=0;HaplotypeScore=126.7829;InbreedingCoeff=-0.1390;MQ=52.56;MQ0=73;MQRankSum=0.105;QD=1.22;ReadPosRankSum=1.327;VQSLOD=2.4567;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,8:33:40.22:169,0,40	1/1:9,0:11:8.43:40,8,0	./.	./.	0/0:16,0:16:30.06:0,30,424	0/1:17,2:20:9.46:9,0,272	0/1:38,0:38:36.25:36,0,603	0/0:34,1:35:4.09:0,4,422	0/1:30,3:34:2.30:2,0,704	1/1:22,0:33:36.38:174,36,0	1/1:7,0:11:8.25:42,8,0	0/1:51,3:54:13.27:13,0,1050	0/1:25,4:29:46.37:46,0,601	0/1:31,4:35:49.37:49,0,585	0/0:38,4:40:17.63:0,18,670	0/1:36,3:38:12.26:12,0,1035	1/1:16,0:22:24.28:116,24,0	0/0:17,0:30:63.02:0,63,620	0/1:21,0:20:4.55:5,0,222	0/1:19,0:21:1.31:1,0,261	0/1:95,5:100:44.35:44,0,1351	0/1:22,2:24:3.44:3,0,356	0/0:16,0:15:5.49:0,5,276	0/1:44,7:53:99:121,0,673	0/0:26,1:27:2.48:0,2,393	0/0:25,0:25:22.73:0,23,367	0/1:16,1:18:20.57:21,0,284	0/1:20,2:22:8.57:9,0,269
chr10	86303245	.	TGTTAACTTCCAAACCCTGCCCCCAAGGG	T	1952.53	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.105;DP=607;FS=14.060;HRun=0;HaplotypeScore=408.3533;InbreedingCoeff=0.9947;MQ=82.34;MQ0=0;MQRankSum=-5.121;QD=92.98;ReadPosRankSum=3.148;VQSLOD=2.1657;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,14314	0/0:7,0:7:21.03:0,21,2297	0/0:18,0:18:54.19:0,54,3633	0/0:17,0:17:48.13:0,48,2569	0/0:19,0:19:57.18:0,57,5826	0/0:21,0:21:63.20:0,63,7018	0/0:17,0:17:48.15:0,48,4857	0/0:22,0:22:66.23:0,66,5854	0/0:17,0:17:51.16:0,51,4525	0/0:22,0:22:66.23:0,66,7182	0/0:18,0:18:51.17:0,51,4784	0/0:28,0:28:81.28:0,81,9782	0/0:21,0:21:63.22:0,63,6515	1/1:8,13:21:27.09:2047,27,0	0/0:35,0:35:99:0,99,10955	0/0:20,0:20:60.21:0,60,6740	0/0:33,0:33:96.33:0,96,11280	0/0:14,0:14:42.14:0,42,5360	0/0:20,0:20:60.21:0,60,6266	0/0:14,0:14:42.14:0,42,4462	0/0:30,0:30:90.30:0,90,10260	0/0:20,0:20:54.19:0,54,5785	0/0:13,0:13:39.13:0,39,4096	0/0:22,0:22:66.23:0,66,7377	0/0:18,0:18:54.19:0,54,5698	0/0:24,0:24:72.25:0,72,8104	0/0:37,0:37:99:0,108,11879	0/0:13,0:13:39.13:0,39,3994
chr10	86303617	.	CAGG	C	503.84	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.125;DP=223;FS=4.300;HRun=0;HaplotypeScore=36.2052;InbreedingCoeff=0.7633;MQ=86.43;MQ0=0;MQRankSum=-1.180;QD=29.64;ReadPosRankSum=2.443;VQSLOD=3.3542;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:30.10:0,30,655	1/1:0,3:3:6.02:95,6,0	0/0:6,0:6:6.02:0,6,131	0/0:15,0:15:32.26:0,32,746	0/0:4,0:4:12.04:0,12,259	0/0:7,0:7:21.07:0,21,459	0/0:11,0:11:30.10:0,30,653	0/0:18,0:18:42.14:0,42,895	0/0:10,0:10:30.10:0,30,655	1/1:0,3:3:9.02:120,9,0	1/1:2,2:4:6.02:95,6,0	0/0:11,0:11:33.11:0,33,721	0/0:6,0:6:18.06:0,18,394	0/0:10,0:10:27.09:0,27,581	0/0:6,0:6:18.06:0,18,374	0/0:10,0:10:30.10:0,30,655	1/1:0,7:7:21.07:333,21,0	0/0:8,0:8:24.08:0,24,496	0/0:9,0:9:21.03:0,21,412	0/0:5,0:5:15.05:0,15,327	0/0:23,0:23:63.22:0,63,1371	0/0:2,0:2:3.01:0,3,65	0/0:4,0:4:12.04:0,12,253	0/0:11,0:11:33.11:0,33,720	0/0:5,0:5:12.04:0,12,234	0/0:6,0:6:15.05:0,15,328	0/0:4,0:4:12.04:0,12,262	0/0:1,0:1:3.01:0,3,65
chr10	86307267	.	GA	G	2498.97	PASS	AB=0.709;AC=23;AF=0.411;AN=56;BaseQRankSum=10.794;DP=605;FS=1.165;HRun=13;HaplotypeScore=73.4473;InbreedingCoeff=0.5496;MQ=79.15;MQ0=0;MQRankSum=1.978;QD=7.39;ReadPosRankSum=2.904;VQSLOD=2.7650;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,26:42:44.27:480,44,0	1/1:1,0:9:16.07:46,16,0	0/1:20,2:21:23.82:24,0,78	0/0:14,0:15:5.49:0,5,56	0/0:18,1:19:14.11:0,14,284	0/0:16,1:19:26:0,26,401	0/0:34,1:36:62.02:0,62,731	1/1:5,22:28:58.69:421,59,0	0/0:22,0:22:40.24:0,40,362	1/1:4,0:16:24.43:70,24,0	1/1:4,1:13:17.22:63,17,0	0/0:19,1:20:20.11:0,20,338	0/0:13,0:13:34.24:0,34,306	0/0:13,0:13:33.02:0,33,303	0/0:18,1:24:47.86:0,48,438	0/1:15,2:17:3.90:4,0,270	1/1:5,1:48:80.36:245,80,0	1/1:10,22:33:54.84:475,55,0	0/1:11,8:20:0.35:152,0,0	0/1:6,14:22:19.47:153,0,19	0/1:6,9:15:30.12:107,0,30	0/0:7,0:7:9:0,9,82	0/0:20,1:21:21.03:0,21,354	0/0:35,2:38:46.13:0,46,744	0/0:19,1:20:14.13:0,14,291	1/1:9,14:23:21.99:255,22,0	0/1:10,11:21:2.37:148,0,2	0/1:3,5:9:7.69:55,0,8
chr10	86308081	.	A	AC	3883.90	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-9.813;DP=657;FS=2.448;HRun=4;HaplotypeScore=67.0487;InbreedingCoeff=0.9952;MQ=87.68;MQ0=0;MQRankSum=-1.240;QD=35.63;ReadPosRankSum=2.039;VQSLOD=4.2297;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:39:99:1353,99,0	1/1:1,8:9:24.08:328,24,0	0/0:20,0:20:57:0,57,592	0/0:29,0:29:73.40:0,73,778	0/0:8,0:8:21.06:0,21,238	0/0:18,0:18:48.14:0,48,544	0/0:36,0:36:99:0,108,1223	0/0:28,0:28:75.18:0,75,837	0/0:17,0:17:51.15:0,51,577	1/1:3,9:12:27.08:357,27,0	1/1:0,9:9:21.07:287,21,0	0/0:32,0:32:87.23:0,87,977	0/0:19,0:19:48.13:0,48,544	0/0:24,0:24:63.18:0,63,715	0/0:38,0:38:99:0,114,1282	0/0:23,0:23:66.15:0,66,727	1/1:0,40:40:99:1559,114,0	0/0:18,0:18:51.15:0,51,578	0/0:21,0:21:51.14:0,51,576	0/0:15,0:15:45.13:0,45,507	0/0:95,0:95:99:0,280,3155	0/0:17,0:17:48.14:0,48,544	0/0:10,0:10:27.06:0,27,297	0/0:28,0:28:81.22:0,81,918	0/0:13,0:13:36.10:0,36,408	0/0:17,0:17:39.11:0,39,441	0/0:15,0:15:39.07:0,39,428	0/0:6,0:6:18.05:0,18,204
chr10	86311488	.	GC	G	1531.90	PASS	AB=0.746;AC=10;AF=0.179;AN=56;BaseQRankSum=7.221;DP=540;FS=4.317;HRun=10;HaplotypeScore=73.5309;InbreedingCoeff=0.7411;MQ=74.17;MQ0=2;MQRankSum=0.588;QD=11.78;ReadPosRankSum=2.247;VQSLOD=3.4694;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:43:80.59:255,81,0	1/1:2,13:15:29.33:235,29,0	0/0:12,0:11:13.06:0,13,98	0/0:18,0:17:19.64:0,20,175	0/0:13,1:14:10.08:0,10,330	0/0:14,0:14:30.05:0,30,313	0/0:26,1:28:42.15:0,42,706	0/0:11,0:18:29.36:0,29,235	0/0:22,0:22:60.15:0,60,656	1/1:3,14:17:44.48:372,44,0	0/1:5,11:16:10.97:269,0,11	0/0:25,0:25:69.12:0,69,726	0/0:22,0:22:38.89:0,39,586	0/0:23,2:25:14.04:0,14,600	0/0:21,1:22:24.87:0,25,484	0/0:21,2:23:14.07:0,14,604	1/1:4,25:29:12.18:559,12,0	0/0:5,0:12:19.99:0,20,100	0/1:3,1:9:5.84:6,0,84	0/0:1,0:10:23.36:0,23,160	0/0:19,0:37:54.15:0,54,359	0/0:17,0:17:42.06:0,42,431	0/0:9,0:9:24.04:0,24,249	0/0:27,1:28:49.14:0,49,762	0/0:14,0:14:33.06:0,33,343	0/0:1,0:15:34.94:0,35,220	0/0:1,0:11:22.89:0,23,133	0/0:3,0:11:8.36:0,8,39
chr10	86316877	.	TACAC	T	1870.27	PASS	AB=0.548;AC=3;AF=0.054;AN=56;BaseQRankSum=4.453;DP=643;FS=2.038;HRun=0;HaplotypeScore=122.2612;InbreedingCoeff=0.7175;MQ=72.93;MQ0=6;MQRankSum=0.152;QD=29.69;ReadPosRankSum=3.053;VQSLOD=3.9210;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,32:40:72.24:1181,72,0	0/0:6,0:10:21.03:0,21,330	0/0:30,0:21:29.56:0,30,481	0/0:45,0:34:51.58:0,52,988	0/0:16,0:17:44.89:0,45,1015	0/0:24,0:23:60.19:0,60,1395	0/0:29,0:29:68.80:0,69,1645	0/0:23,0:23:42.14:0,42,1007	0/0:11,0:12:29.84:0,30,649	0/0:9,0:24:66.12:0,66,1129	0/0:8,0:15:27.09:0,27,461	0/0:19,0:20:44.89:0,45,1051	0/0:9,0:10:20.81:0,21,456	0/0:11,0:12:32.85:0,33,746	0/0:18,0:18:54.17:0,54,1248	0/0:16,0:16:45.15:0,45,1111	0/0:8,0:31:72.23:0,72,1240	0/1:4,18:23:6.57:796,0,7	0/0:21,0:24:47.37:0,47,971	0/0:13,0:13:36.12:0,36,832	0/0:49,0:53:99:0,120,2773	0/0:27,0:29:71.72:0,72,1634	0/0:15,0:15:36.10:0,36,838	0/0:34,0:33:71.89:0,72,1777	0/0:14,0:15:35.86:0,36,829	0/0:27,0:31:74.71:0,75,1577	0/0:13,0:15:41.61:0,42,887	0/0:9,0:9:18.06:0,18,445
chr10	86316974	.	A	AACAC	6824.42	PASS	AB=0.690;AC=21;AF=0.375;AN=56;BaseQRankSum=-1.508;DP=736;FS=0.000;HRun=0;HaplotypeScore=140.7043;InbreedingCoeff=0.6043;MQ=61.09;MQ0=7;MQRankSum=-2.770;QD=19.12;ReadPosRankSum=-1.812;VQSLOD=4.2002;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:37,13:52:75.36:1342,75,0	0/1:4,0:13:26.06:64,0,26	0/0:44,0:28:14.55:0,15,184	0/0:41,0:28:9.75:0,10,94	0/0:11,0:15:33.09:0,33,445	0/0:20,0:21:30.08:0,30,437	0/0:23,0:23:45.15:0,45,723	1/1:21,1:24:15.50:242,16,0	0/0:17,0:17:24.08:0,24,385	0/1:17,0:23:99:132,0,151	0/1:14,0:20:49.18:137,0,49	0/0:26,0:27:57.17:0,57,860	0/0:16,0:17:42.13:0,42,653	0/0:9,0:10:20.93:0,21,317	0/0:30,0:32:60.19:0,60,923	0/0:18,0:20:39.12:0,39,604	0/1:19,0:32:88.02:200,0,88	1/1:10,3:14:15.05:334,15,0	1/1:17,7:26:42.23:774,42,0	0/1:6,12:19:27.09:380,0,27	1/1:22,24:60:48.44:764,48,0	0/0:29,0:29:54.18:0,54,829	0/0:17,0:17:29.76:0,30,441	0/0:39,0:48:99:0,99,1409	0/0:12,0:17:36.08:0,36,474	1/1:16,16:43:52.08:1242,52,0	1/1:5,10:16:35.86:772,36,0	1/1:4,5:11:23.55:441,24,0
chr10	86317259	.	C	CA	6805.98	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-6.951;DP=681;FS=15.265;HRun=0;HaplotypeScore=68.5291;InbreedingCoeff=0.9996;MQ=78.88;MQ0=0;MQRankSum=-1.571;QD=43.08;ReadPosRankSum=3.225;VQSLOD=3.8086;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,50:50:99:2349,148,0	1/1:0,12:12:30.10:467,30,0	0/0:15,0:15:40.37:0,40,563	0/0:18,0:18:51.17:0,51,709	0/0:21,0:21:56.78:0,57,797	0/0:19,0:19:54.17:0,54,733	0/0:31,0:31:91.17:0,91,1238	0/0:19,0:19:57.19:0,57,797	0/0:24,0:24:69.23:0,69,960	1/1:2,23:25:66.22:1035,66,0	1/1:0,14:14:33.11:528,33,0	0/0:34,0:34:99:0,102,1419	0/0:19,0:19:54.18:0,54,751	0/0:19,0:19:57.19:0,57,797	0/0:25,0:25:75.25:0,75,1047	0/0:23,0:23:69.21:0,69,944	1/1:0,36:36:96.33:1525,96,0	1/1:0,21:21:57.19:902,57,0	0/0:22,0:22:63.21:0,63,874	0/0:17,0:17:45.15:0,45,622	0/0:81,0:81:99:0,244,3353	0/0:27,0:27:81.27:0,81,1129	0/0:18,0:18:54.17:0,54,734	0/0:27,0:27:81.27:0,81,1130	0/0:12,0:12:36.12:0,36,504	0/0:25,1:26:30.27:0,30,997	0/0:15,0:15:45.15:0,45,628	0/0:11,0:11:33.11:0,33,461
chr10	86318523	.	TCCCTCCC	T	582.47	PASS	AB=0.756;AC=1;AF=0.021;AN=48;BaseQRankSum=5.742;DP=135;FS=2.515;HRun=0;HaplotypeScore=40.8729;InbreedingCoeff=-0.0204;MQ=67.38;MQ0=1;MQRankSum=-4.795;QD=17.13;ReadPosRankSum=4.577;VQSLOD=1.7548;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:23,11:34:99:655,0,128	./.	0/0:7,0:4:6.02:0,6,78	0/0:5,0:4:5.59:0,6,44	./.	0/0:3,0:3:9.03:0,9,227	0/0:5,0:5:15.02:0,15,193	0/0:5,0:5:15.04:0,15,181	0/0:4,0:4:12.04:0,12,416	0/0:1,0:1:1.55:0,2,4	./.	0/0:10,0:10:26.96:0,27,562	0/0:3,0:2:6.01:0,6,85	0/0:5,0:5:15.04:0,15,286	0/0:6,0:6:17.87:0,18,288	0/0:2,0:2:6.02:0,6,78	0/0:2,0:2:6.02:0,6,78	0/0:2,0:2:6.02:0,6,78	0/0:6,0:6:18.03:0,18,224	./.	0/0:12,0:12:33.07:0,33,573	0/0:2,0:2:5.93:0,6,82	0/0:2,0:2:3.01:0,3,39	0/0:8,0:8:20.79:0,21,438	0/0:2,0:2:6:0,6,85	0/0:3,0:3:9.02:0,9,131	0/0:1,0:1:3.01:0,3,48	0/0:3,0:2:3.01:0,3,64
chr10	86322859	.	C	CT	607.42	PASS	AB=1.000;AC=21;AF=0.438;AN=48;BaseQRankSum=2.844;DP=147;FS=1.678;HRun=0;HaplotypeScore=137.1294;InbreedingCoeff=0.4283;MQ=67.57;MQ0=0;MQRankSum=-1.275;QD=7.79;ReadPosRankSum=2.962;VQSLOD=3.9669;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:2.97:0,3,28	./.	1/1:6,0:3:1.29:4,1,0	0/0:5,0:2:7.98:0,8,41	1/1:4,0:4:1.57:5,2,0	0/1:4,0:4:2.41:2,0,5	0/0:14,0:14:17.22:0,17,71	1/1:9,1:10:25.19:250,25,0	0/0:8,0:8:4.51:0,5,59	0/0:4,0:4:2.24:0,2,30	./.	0/0:6,0:6:3.84:0,4,12	0/1:5,0:5:10.12:10,0,16	0/0:4,0:4:6.81:0,7,30	0/1:6,0:6:2.32:2,0,8	0/0:2,0:2:2.19:0,2,17	0/0:6,0:6:5.78:0,6,44	0/0:3,0:3:6.74:0,7,30	1/1:7,0:7:15.01:164,15,0	1/1:2,0:2:2.50:9,2,0	1/1:16,7:23:10.96:84,11,0	./.	0/0:1,0:1:2.04:0,2,6	0/0:6,0:6:2.68:0,3,11	./.	1/1:4,0:4:10.27:106,10,0	1/1:4,0:4:9:85,9,0	1/1:3,0:3:0.48:32,0,0
chr10	86325597	.	TACACACACACACACAC	T	786.86	PASS	AB=0.868;AC=8;AF=0.160;AN=50;BaseQRankSum=1.025;DP=532;FS=1.149;HRun=0;HaplotypeScore=196.3226;InbreedingCoeff=0.4826;MQ=70.78;MQ0=13;MQRankSum=-2.617;QD=8.46;ReadPosRankSum=1.164;VQSLOD=2.3713;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:21:21.01:0,21,399	0/0:7,0:7:9.03:0,9,490	./.	./.	0/0:19,0:19:15.05:0,15,668	0/0:16,0:15:15.52:0,16,1056	0/0:29,0:29:26.12:0,26,1281	0/1:24,0:24:69.55:70,0,85	0/0:4,0:5:6.02:0,6,353	0/0:22,0:22:37.37:0,37,1807	0/0:10,0:10:12.93:0,13,670	0/0:14,0:14:18.04:0,18,1030	0/0:11,0:11:6.02:0,6,322	0/0:12,0:13:12.04:0,12,707	0/0:15,0:15:21.07:0,21,1474	0/0:18,0:19:18.06:0,18,937	0/0:33,0:33:54.16:0,54,2927	0/1:16,0:24:13.81:108,0,14	0/0:15,0:15:3.69:0,4,9	./.	0/0:19,8:27:3.01:0,3,179	0/0:7,0:6:6.49:0,6,345	0/0:9,0:10:12.93:0,13,629	0/0:46,0:48:78.27:0,78,4141	0/0:10,0:10:12.51:0,13,578	1/1:15,0:16:9.03:218,9,0	1/1:11,12:23:11.01:458,11,0	1/1:5,0:5:6:67,6,0
chr10	86326116	.	G	GAAA	2193.57	PASS	AB=0.835;AC=11;AF=0.196;AN=56;BaseQRankSum=5.915;DP=553;FS=9.751;HRun=12;HaplotypeScore=97.9056;InbreedingCoeff=0.6491;MQ=64.77;MQ0=3;MQRankSum=0.055;QD=15.56;ReadPosRankSum=-1.300;VQSLOD=1.2813;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:36:8.03:346,0,8	1/1:2,3:5:9.03:165,9,0	0/1:17,0:10:51.87:55,0,52	0/0:27,0:18:18.91:0,19,172	0/0:14,0:16:30.24:0,30,331	0/0:20,0:21:38.67:0,39,407	0/0:15,0:16:32.96:0,33,344	0/0:21,0:22:41.83:0,42,443	0/0:9,0:10:23.97:0,24,252	1/1:6,15:22:57.08:854,57,0	1/1:2,11:15:31.23:399,31,0	0/0:22,0:23:47.76:0,48,522	0/0:9,0:9:21:0,21,226	0/0:16,0:17:35.90:0,36,378	0/0:11,0:12:8.15:0,8,286	0/0:20,0:23:66.05:0,66,707	1/1:7,8:22:36.01:499,36,0	0/0:12,0:13:28.53:0,29,332	0/0:20,0:23:25.66:0,26,462	0/0:19,0:19:35.93:0,36,381	0/0:17,0:17:35.91:0,36,383	0/0:18,0:18:45:0,45,504	0/0:23,0:25:59.88:0,60,631	0/0:36,0:41:84.04:0,84,982	0/0:22,0:23:65.99:0,66,695	0/1:18,0:19:44.85:45,0,207	0/0:20,0:21:40.95:0,41,498	0/0:10,0:16:26.63:0,27,267
chr10	86327580	.	AC	A	1131.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.627;DP=503;FS=2.363;HRun=3;HaplotypeScore=49.7341;InbreedingCoeff=0.9544;MQ=78.56;MQ0=1;MQRankSum=-2.753;QD=31.44;ReadPosRankSum=1.891;VQSLOD=3.4429;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:99:1227,99,0	0/0:5,0:5:12.03:0,12,156	0/0:14,0:14:38.91:0,39,499	0/0:12,0:12:27.99:0,28,425	0/0:12,0:12:30.10:0,30,429	0/0:13,0:13:36.12:0,36,516	0/0:30,0:30:87.29:0,87,1252	0/0:30,0:30:90.30:0,90,1295	0/0:19,0:19:57.18:0,57,793	0/0:7,0:7:21.07:0,21,302	0/0:12,0:12:33.11:0,33,475	0/0:12,0:12:36.09:0,36,482	0/0:18,0:18:54.17:0,54,760	0/0:22,0:22:66.22:0,66,950	0/0:23,0:23:69.22:0,69,977	0/0:14,0:14:42.14:0,42,605	0/0:36,0:36:99:0,102,1468	0/0:22,0:21:60.19:0,60,842	0/0:15,0:15:45.15:0,45,648	0/0:18,0:18:51.17:0,51,734	0/0:29,0:29:84.25:0,84,1171	0/0:8,0:8:24.08:0,24,346	0/0:11,0:11:27.08:0,27,370	0/0:22,0:22:63.20:0,63,890	0/0:20,0:20:57.19:0,57,821	0/0:17,0:17:51.17:0,51,734	0/0:20,0:20:54.14:0,54,752	0/0:6,0:6:18.06:0,18,259
chr10	86327768	.	AAGAAAGAGAGAG	A	5772.62	PASS	AB=0.995;AC=14;AF=0.250;AN=56;BaseQRankSum=14.795;DP=537;FS=6.674;HRun=0;HaplotypeScore=204.9397;InbreedingCoeff=0.2323;MQ=59.99;MQ0=11;MQRankSum=-7.959;QD=25.89;ReadPosRankSum=-0.099;VQSLOD=3.4933;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,33:36:39.13:1214,39,0	1/1:7,0:7:18.77:93,19,0	0/0:18,0:12:34.97:0,35,528	0/0:11,0:8:20.86:0,21,353	0/0:23,0:21:63.22:0,63,2714	0/0:18,0:18:51.16:0,51,1931	0/0:26,0:26:75.24:0,75,2152	0/1:16,0:11:11.72:231,0,12	0/0:17,0:17:51.17:0,51,1783	0/1:24,0:24:35.23:1141,0,35	1/1:18,0:18:42.58:829,43,0	0/0:13,0:13:36.58:0,37,1077	0/0:18,0:18:26.24:0,26,1682	0/0:21,0:21:63.21:0,63,2338	0/0:19,0:19:54.17:0,54,1704	0/0:15,0:15:45.15:0,45,1683	0/1:32,0:31:31.42:510,0,31	0/0:24,0:24:43.06:0,43,1664	0/1:16,0:13:98.10:505,0,98	0/1:15,0:15:91.67:193,0,92	0/0:3,0:3:6.01:0,6,75	0/0:18,0:18:54.18:0,54,2303	0/0:17,0:17:48.16:0,48,1482	0/0:25,0:25:69.71:0,70,2719	0/0:28,0:28:77.94:0,78,2827	0/1:23,0:23:77:526,0,77	0/1:21,0:20:99:244,0,227	0/1:13,0:13:50.73:288,0,51
chr10	86327772	.	AAGAGAGAGAGAG	A	9530.44	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=13.237;DP=553;FS=8.506;HRun=0;HaplotypeScore=204.7257;InbreedingCoeff=0.6624;MQ=59.66;MQ0=7;MQRankSum=-8.809;QD=41.98;ReadPosRankSum=-1.430;VQSLOD=3.5205;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:35:39.09:965,39,0	1/1:7,0:7:21.05:245,21,0	0/0:24,0:16:47.90:0,48,1206	0/0:10,0:8:21.07:0,21,553	0/0:26,0:25:75.26:0,75,3148	0/0:17,0:17:48.16:0,48,2072	0/0:25,0:25:75.21:0,75,2421	1/1:18,0:14:26.92:573,27,0	0/0:18,0:18:54.19:0,54,2097	1/1:22,6:27:69.23:1881,69,0	1/1:3,15:18:51.09:1204,51,0	0/0:14,0:14:36.04:0,36,1184	0/0:17,0:17:48.16:0,48,1924	0/0:22,0:22:66.23:0,66,2600	0/0:19,0:19:51.17:0,51,1903	0/0:14,0:14:42.13:0,42,1719	1/1:32,0:31:49.56:947,50,0	0/0:24,0:23:64.77:0,65,1773	0/1:15,0:14:49.38:846,0,49	0/1:14,0:14:7.52:483,0,8	0/0:3,0:3:2.75:0,3,23	0/0:17,0:19:54.17:0,54,2438	0/0:18,0:18:54.09:0,54,1767	0/0:27,0:27:74.47:0,74,3053	0/0:28,0:28:74.95:0,75,3159	1/1:22,1:23:50.53:1132,51,0	0/1:22,0:21:99:690,0,106	0/1:14,0:14:15.41:565,0,15
chr10	86327777	.	AGAGAGAG	A	5349.41	PASS	AB=0.844;AC=22;AF=0.393;AN=56;BaseQRankSum=16.777;DP=557;FS=9.941;HRun=0;HaplotypeScore=171.2227;InbreedingCoeff=0.8289;MQ=60.74;MQ0=4;MQRankSum=-9.558;QD=24.32;ReadPosRankSum=-0.162;VQSLOD=3.4570;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:35:36.30:362,36,0	1/1:2,5:7:20.81:369,21,0	0/0:29,0:20:60.20:0,60,1618	0/0:13,0:10:27.09:0,27,747	0/0:29,0:28:84.29:0,84,2773	0/0:18,0:18:51.17:0,51,1640	0/0:27,0:27:81.24:0,81,2304	1/1:13,0:11:28.18:199,28,0	0/0:18,0:18:54.19:0,54,1780	1/1:23,0:23:61.83:783,62,0	1/1:18,0:18:50.09:482,50,0	0/0:15,0:15:42.11:0,42,1130	0/0:16,0:16:48.16:0,48,1600	0/0:24,0:24:72.25:0,72,2246	0/0:18,0:18:51.17:0,51,1535	0/0:15,0:15:45.15:0,45,1472	1/1:27,3:29:50.85:573,51,0	0/0:24,0:23:68.93:0,69,1374	1/1:15,0:15:3.87:348,4,0	1/1:14,3:17:21.38:405,21,0	0/1:3,0:3:9.29:32,0,9	0/0:18,0:18:54.17:0,54,1723	0/0:18,0:18:54.09:0,54,1510	0/0:28,0:28:78.13:0,78,2530	0/0:27,0:27:78.27:0,78,2625	1/1:17,5:22:65.37:735,65,0	0/1:12,10:21:16.86:728,0,17	1/1:10,4:14:10.02:334,10,0
chr10	86327826	.	C	CT	2384.87	PASS	AB=0.815;AC=14;AF=0.250;AN=56;BaseQRankSum=0.129;DP=613;FS=4.460;HRun=12;HaplotypeScore=107.1767;InbreedingCoeff=0.7963;MQ=68.12;MQ0=6;MQRankSum=-1.739;QD=13.71;ReadPosRankSum=-1.276;VQSLOD=3.2651;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,1:39:55.79:0,56,371	0/0:1,0:8:14.26:0,14,41	0/1:27,0:16:5.30:5,0,92	0/0:35,0:19:9.18:0,9,68	0/0:25,0:24:59.60:0,60,433	0/0:12,0:12:26.83:0,27,197	0/0:17,0:18:40.75:0,41,286	0/1:7,9:17:48.63:214,0,49	0/0:23,0:23:20.48:0,20,280	0/0:6,0:22:34.08:0,34,114	0/0:7,0:15:16.27:0,16,48	0/0:12,0:13:31.86:0,32,225	0/0:23,0:23:50.61:0,51,368	0/0:19,0:20:40.73:0,41,290	0/0:21,0:25:51.67:0,52,357	0/0:20,0:21:52.66:0,53,378	0/0:6,0:31:44.78:0,45,130	0/0:19,0:18:31.31:0,31,220	1/1:9,15:25:22.33:410,22,0	1/1:5,20:27:41.02:407,41,0	1/1:0,6:6:18.03:175,18,0	0/0:17,0:17:38.74:0,39,284	0/0:20,0:20:46.22:0,46,322	0/0:28,0:28:38.34:0,38,410	0/0:21,1:23:7.78:0,8,200	1/1:6,23:31:17.52:533,18,0	1/1:4,22:26:37.14:488,37,0	1/1:2,12:15:19.99:342,20,0
chr10	86328907	.	GGA	G	509.24	PASS	AB=0.976;AC=14;AF=0.280;AN=50;BaseQRankSum=0.974;DP=324;FS=70.684;HRun=0;HaplotypeScore=35.9218;InbreedingCoeff=0.3061;MQ=54.84;MQ0=26;MQRankSum=-3.446;QD=4.43;ReadPosRankSum=-2.834;VQSLOD=-0.7327;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,2:18:23.69:161,24,0	0/0:5,0:3:8.96:0,9,71	0/0:25,0:6:15.47:0,15,152	0/0:36,0:10:13.96:0,14,114	0/1:7,0:7:17.14:17,0,46	0/0:14,0:14:20.56:0,21,175	0/0:15,0:15:23.81:0,24,234	1/1:15,0:15:35.18:227,35,0	0/0:11,0:8:8.33:0,8,103	0/0:6,0:5:12:0,12,171	0/0:2,0:2:2.94:0,3,18	0/0:7,1:8:10.88:0,11,138	0/0:5,0:5:5.97:0,6,47	0/0:9,3:10:2.61:0,3,69	./.	0/0:11,0:8:15.46:0,15,155	0/0:20,0:18:37.68:0,38,451	0/1:17,0:15:10.75:11,0,100	0/1:13,1:11:8.89:42,0,9	./.	./.	0/1:11,0:11:13.37:13,0,112	0/0:9,2:11:14.84:0,15,103	0/1:8,0:5:9.75:10,0,93	0/0:9,0:9:14.53:0,15,130	1/1:3,0:3:8.99:76,9,0	0/1:11,1:12:41.01:41,0,41	1/1:9,0:6:8.97:72,9,0
chr10	86329212	.	GTC	G	652.37	PASS	AB=0.940;AC=8;AF=0.148;AN=54;BaseQRankSum=4.392;DP=567;FS=3.876;HRun=0;HaplotypeScore=100.0463;InbreedingCoeff=0.6935;MQ=50.46;MQ0=22;MQRankSum=-0.872;QD=9.88;ReadPosRankSum=0.618;VQSLOD=3.4512;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:35.95:0,36,550	1/1:4,1:5:13.29:166,13,0	./.	0/0:9,0:2:2.98:0,3,22	0/0:19,0:19:36.01:0,36,573	0/0:19,0:19:44.96:0,45,684	0/0:22,0:22:39.13:0,39,660	0/0:33,0:27:60.21:0,60,718	0/0:26,0:26:32.60:0,33,493	1/1:11,2:10:19.65:301,20,0	1/1:10,3:12:11.88:168,12,0	0/0:23,0:22:40.49:0,40,913	0/0:14,0:14:41.81:0,42,677	0/0:20,0:20:54.18:0,54,878	0/0:26,0:25:69.09:0,69,1087	0/0:22,0:22:56.95:0,57,876	0/1:19,3:21:31.08:157,0,31	0/1:13,0:13:0.87:1,0,129	0/0:25,0:18:23.87:0,24,516	0/0:17,0:16:18.01:0,18,218	0/0:52,0:47:63.29:0,63,753	0/0:23,0:23:47.53:0,48,798	0/0:16,0:15:36.12:0,36,599	0/0:29,0:28:61.89:0,62,953	0/0:13,0:13:33:0,33,534	0/0:28,0:28:36.59:0,37,911	0/0:21,0:20:35.04:0,35,414	0/0:7,0:5:15.05:0,15,209
chr10	86329218	.	GTCTCTCTC	G	1532.06	PASS	AB=0.855;AC=17;AF=0.340;AN=50;BaseQRankSum=6.806;DP=575;FS=6.961;HRun=0;HaplotypeScore=157.7290;InbreedingCoeff=0.4530;MQ=50.59;MQ0=20;MQRankSum=-3.928;QD=6.20;ReadPosRankSum=-0.176;VQSLOD=1.4693;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:7.69:0,8,22	1/1:5,1:6:1.55:4,2,0	./.	./.	0/0:15,0:18:24.08:0,24,590	0/0:18,0:20:33.58:0,34,759	0/0:20,0:24:21.53:0,22,499	0/1:25,7:26:48.11:267,0,48	1/1:12,1:27:2.76:15,3,0	0/1:12,0:11:5.68:41,0,6	1/1:12,2:14:5.72:68,6,0	0/0:24,0:24:38.72:0,39,989	0/0:13,0:15:33.11:0,33,1117	0/0:21,0:21:42.10:0,42,977	0/0:28,0:28:56.67:0,57,1662	0/0:18,0:21:39.13:0,39,1033	0/1:19,1:20:8.89:134,0,9	0/0:14,0:14:10.84:0,11,173	1/1:17,7:18:8.83:230,9,0	./.	1/1:34,0:44:32.73:573,33,0	0/0:24,0:24:41.78:0,42,1250	0/0:17,0:16:24.08:0,24,631	0/0:24,0:27:18.91:0,19,1195	0/0:14,0:15:30.10:0,30,734	0/1:14,0:28:84.79:85,0,293	1/1:9,12:21:12.04:260,12,0	0/1:9,0:7:19.67:20,0,105
chr10	86329257	.	TCTCTCTGTCC	T	523.38	PASS	AB=0.698;AC=5;AF=0.093;AN=54;BaseQRankSum=3.142;DP=660;FS=4.267;HRun=0;HaplotypeScore=197.1310;InbreedingCoeff=0.5630;MQ=62.23;MQ0=14;MQRankSum=0.869;QD=7.07;ReadPosRankSum=-0.619;VQSLOD=2.5722;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:43:99:0,105,2437	./.	0/0:47,0:19:44.10:0,44,836	0/0:55,0:22:30.39:0,30,513	0/0:22,0:22:48.16:0,48,1613	0/0:21,0:21:51.18:0,51,1877	0/0:25,0:24:54.09:0,54,1493	0/0:33,0:33:65.67:0,66,1972	0/0:26,0:26:39.05:0,39,1015	1/1:3,9:11:21.05:447,21,0	0/1:2,10:12:0:0,0,0	0/0:23,0:22:54.10:0,54,1833	0/0:23,0:23:54.18:0,54,1685	0/0:12,0:12:24.08:0,24,1055	0/0:26,0:26:60.19:0,60,2040	0/0:17,0:17:33.11:0,33,1267	0/1:4,18:22:3.74:160,0,4	0/0:9,0:9:15.05:0,15,680	0/0:22,0:19:36.07:0,36,931	0/0:14,0:13:24:0,24,512	0/0:34,0:33:57.10:0,57,1384	0/0:27,0:26:69.11:0,69,2185	0/0:25,0:25:54.18:0,54,1670	0/0:28,0:28:71.36:0,71,2392	0/0:13,0:13:30.99:0,31,808	0/1:28,0:28:29.57:30,0,1614	0/0:19,0:17:33.06:0,33,730	0/0:14,0:14:42.14:0,42,1377
chr10	86329479	.	AAAAC	A	4619.73	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=11.504;DP=456;FS=0.465;HRun=0;HaplotypeScore=81.6761;InbreedingCoeff=0.9156;MQ=64.96;MQ0=0;MQRankSum=-1.869;QD=23.45;ReadPosRankSum=2.445;VQSLOD=4.6588;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,30:38:78.27:1283,78,0	1/1:3,0:5:3:28,3,0	0/0:26,0:19:27.09:0,27,614	0/0:22,0:18:29.82:0,30,553	0/0:18,0:18:30.10:0,30,710	0/0:18,0:18:42.14:0,42,1026	0/0:19,0:19:41.94:0,42,1020	1/1:8,13:21:39.10:577,39,0	0/0:11,0:11:30.09:0,30,682	1/1:2,0:4:3:28,3,0	1/1:2,0:6:6.01:56,6,0	0/0:12,0:12:27.09:0,27,659	0/0:13,0:13:27.09:0,27,634	0/0:10,0:10:27.08:0,27,611	0/0:18,0:18:51.17:0,51,1192	0/0:11,0:11:33.11:0,33,797	1/1:8,0:19:24.03:224,24,0	0/0:13,0:13:27.09:0,27,602	1/1:10,10:20:27.06:374,27,0	1/1:6,6:12:18.02:267,18,0	1/1:10,22:31:48.16:790,48,0	0/0:13,0:13:27.09:0,27,658	0/0:17,0:17:30.09:0,30,655	0/0:30,0:29:78.23:0,78,1650	0/0:8,0:8:24.06:0,24,536	1/1:6,15:21:45.06:649,45,0	1/1:4,10:14:14.56:246,15,0	1/1:2,3:5:6.02:99,6,0
chr10	86329669	.	C	CT	4634.95	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=6.148;DP=424;FS=7.597;HRun=1;HaplotypeScore=60.7148;InbreedingCoeff=0.9235;MQ=80.00;MQ0=6;MQRankSum=-2.572;QD=24.14;ReadPosRankSum=-1.646;VQSLOD=3.7812;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,1:26:69.03:780,69,0	1/1:10,2:12:21.93:270,22,0	0/0:28,0:17:38.64:0,39,372	0/0:24,0:16:31.62:0,32,300	0/0:22,0:22:61.36:0,61,712	0/0:15,0:15:42.70:0,43,453	0/0:12,0:12:33.07:0,33,382	1/1:12,0:12:33.02:334,33,0	0/0:10,0:9:27.06:0,27,319	1/1:10,2:12:32.47:268,32,0	1/1:7,3:10:27.06:298,27,0	0/0:8,0:8:21.05:0,21,253	0/0:14,0:13:33.09:0,33,398	0/0:9,0:9:24.05:0,24,288	0/0:12,0:12:36.11:0,36,451	0/0:14,0:14:42.11:0,42,514	1/1:20,2:22:26.82:259,27,0	0/1:13,0:13:32.62:48,0,33	1/1:18,0:18:48.05:511,48,0	1/1:16,0:16:44.59:368,45,0	1/1:10,0:10:21.03:217,21,0	0/0:7,0:7:21.03:0,21,250	0/0:21,0:21:63.05:0,63,715	0/0:20,0:20:60.14:0,60,709	0/0:16,0:16:45.08:0,45,505	1/1:13,1:14:37.88:409,38,0	1/1:17,3:20:59.97:663,60,0	1/1:5,1:6:18.04:211,18,0
chr10	86329670	.	T	TTCC	5757.03	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=1.879;DP=439;FS=5.776;HRun=0;HaplotypeScore=78.0269;InbreedingCoeff=0.9948;MQ=75.71;MQ0=7;MQRankSum=-3.858;QD=30.46;ReadPosRankSum=-3.058;VQSLOD=4.1052;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:30:68.96:684,69,0	1/1:6,4:11:32.95:553,33,0	0/0:29,0:14:34.25:0,34,521	0/0:28,0:16:25.56:0,26,433	0/0:21,0:21:63.17:0,63,1040	0/0:15,0:15:45.09:0,45,673	0/0:12,0:12:33.08:0,33,513	1/1:10,0:13:33.02:342,33,0	0/0:10,0:9:27.07:0,27,426	1/1:10,2:13:32.62:464,33,0	1/1:11,2:13:27.09:600,27,0	0/0:8,0:8:21.05:0,21,353	0/0:13,0:12:33.10:0,33,543	0/0:8,0:8:24.08:0,24,425	0/0:12,0:12:36.11:0,36,631	0/0:14,0:14:42.12:0,42,712	1/1:15,4:22:27.09:550,27,0	0/0:2,0:13:17.80:0,18,141	1/1:2,0:18:48:554,48,0	1/1:1,13:17:44.35:453,44,0	1/1:6,0:9:21.03:217,21,0	0/0:7,0:7:21.04:0,21,351	0/0:23,0:23:63.09:0,63,976	0/0:21,0:21:60.15:0,60,939	0/0:16,0:16:45.09:0,45,696	1/1:14,0:16:35.20:368,35,0	1/1:16,1:20:60.02:748,60,0	1/1:5,0:6:17.97:225,18,0
chr10	86329687	.	TTTC	T	930.89	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=5.112;DP=388;FS=9.579;HRun=0;HaplotypeScore=69.4760;InbreedingCoeff=0.3872;MQ=64.20;MQ0=13;MQRankSum=-4.575;QD=7.76;ReadPosRankSum=0.530;VQSLOD=1.6574;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:28.23:0,28,312	1/1:1,4:5:11.96:117,12,0	0/0:27,0:8:15.05:0,15,251	0/0:22,0:10:2.92:0,3,125	0/0:14,0:13:39.10:0,39,667	0/0:11,0:11:29.68:0,30,499	0/0:16,0:16:42:0,42,789	1/1:8,0:7:3.50:56,3,0	0/0:9,0:8:21.06:0,21,395	1/1:3,7:10:17.94:185,18,0	1/1:4,6:10:4.29:33,4,0	0/0:9,0:9:24.55:0,25,498	0/0:14,0:13:39.09:0,39,786	0/0:8,0:8:24.07:0,24,489	0/0:13,0:13:39.11:0,39,722	0/0:12,0:12:33.11:0,33,723	1/1:23,4:27:32.13:394,32,0	0/0:18,0:16:33.11:0,33,702	0/1:13,0:12:33.76:81,0,34	0/1:6,0:6:35.62:36,0,36	0/1:7,0:7:11.14:43,0,11	0/0:8,0:8:21.01:0,21,370	0/0:17,0:17:45.10:0,45,851	0/0:24,0:23:60.18:0,60,1311	0/0:14,0:14:32.73:0,33,598	0/1:14,0:14:17.15:101,0,17	0/1:14,0:14:36.42:36,0,53	0/1:6,0:6:24.35:24,0,43
chr10	86329688	.	TTC	T	1664.62	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=6.077;DP=374;FS=13.531;HRun=0;HaplotypeScore=58.0049;InbreedingCoeff=0.7862;MQ=62.86;MQ0=12;MQRankSum=-4.646;QD=10.03;ReadPosRankSum=0.163;VQSLOD=1.9083;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:30:13.69:14,0,64	1/1:4,1:5:11.85:87,12,0	0/0:26,0:8:15.01:0,15,187	0/1:19,0:8:3.33:3,0,19	0/0:12,0:11:30.03:0,30,426	0/0:11,0:11:24.03:0,24,343	0/0:16,0:16:41.98:0,42,625	1/1:3,4:6:9.71:122,10,0	0/0:9,0:8:18.05:0,18,278	1/1:8,0:9:17.79:136,18,0	1/1:8,0:8:5.16:34,5,0	0/0:9,0:9:24.53:0,25,370	0/0:13,0:12:36.08:0,36,603	0/0:8,0:8:24.05:0,24,384	0/0:14,0:14:42.06:0,42,571	0/0:12,0:12:33.10:0,33,562	1/1:27,0:27:32.38:285,32,0	0/0:18,0:16:33.06:0,33,551	1/1:12,2:13:29.32:291,29,0	1/1:4,2:6:0.10:103,0,0	1/1:6,0:6:11.32:161,11,0	0/0:9,0:9:20.97:0,21,293	0/0:15,0:15:40.33:0,40,599	0/0:24,0:23:60.14:0,60,1043	0/0:12,0:12:30.02:0,30,446	1/1:11,2:13:28.59:307,29,0	1/1:12,1:13:14.03:214,14,0	1/1:5,1:6:7.09:114,7,0
chr10	86329689	.	TC	T	1529.50	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=7.493;DP=350;FS=5.924;HRun=2;HaplotypeScore=48.4981;InbreedingCoeff=0.9325;MQ=62.11;MQ0=12;MQRankSum=-5.301;QD=11.86;ReadPosRankSum=-2.930;VQSLOD=0.8418;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,22:27:30.85:276,31,0	1/1:5,0:5:11.65:67,12,0	0/0:23,1:6:9.01:0,9,100	0/0:19,0:8:6.51:0,7,48	0/0:11,0:10:18.03:0,18,225	0/0:9,0:9:17.97:0,18,209	0/0:16,0:16:38.98:0,39,445	1/1:5,0:4:11.92:88,12,0	0/0:8,0:7:12.04:0,12,160	1/1:8,0:8:17.25:102,17,0	1/1:6,1:7:5.87:36,6,0	0/0:10,0:10:21.03:0,21,240	0/0:13,0:12:33.08:0,33,429	0/0:8,0:8:21.06:0,21,269	0/0:14,0:14:33.04:0,33,356	0/0:12,0:12:27.56:0,28,369	1/1:24,0:24:32.06:216,32,0	0/0:18,0:16:30.10:0,30,387	1/1:11,0:10:29.85:241,30,0	1/1:6,0:6:17.58:124,18,0	1/1:5,1:6:11.97:101,12,0	0/0:8,0:8:17.96:0,18,200	0/0:15,0:15:30.07:0,30,371	0/0:24,0:23:59.20:0,59,761	0/0:12,0:12:24.01:0,24,277	1/1:10,1:11:25.15:224,25,0	1/1:11,0:11:20.38:179,20,0	1/1:6,0:6:11.91:97,12,0
chr10	86330354	.	G	GAA	3967.94	PASS	AB=0.593;AC=23;AF=0.411;AN=56;BaseQRankSum=1.382;DP=506;FS=4.335;HRun=12;HaplotypeScore=80.4882;InbreedingCoeff=0.8400;MQ=58.52;MQ0=7;MQRankSum=-2.555;QD=15.20;ReadPosRankSum=-2.705;VQSLOD=2.1924;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,37:42:71.11:884,71,0	1/1:3,0:7:9.98:35,10,0	0/0:8,0:6:8.59:0,9,80	0/0:10,0:6:8.64:0,9,62	0/0:13,0:15:26.44:0,26,218	0/0:11,0:12:11.64:0,12,145	0/0:16,0:19:14.93:0,15,217	1/1:13,9:23:5.72:296,6,0	0/0:15,0:15:26.44:0,26,232	1/1:5,0:24:44.59:207,45,0	0/1:5,1:16:18.93:114,0,19	0/0:13,0:13:23.94:0,24,213	0/0:20,0:20:41.78:0,42,388	0/0:14,0:14:7.45:0,7,196	0/0:8,0:8:17.96:0,18,167	0/0:14,0:16:11.69:0,12,200	1/1:13,2:36:28.39:345,28,0	0/0:17,0:16:39.02:0,39,360	1/1:11,16:28:25.69:497,26,0	1/1:3,9:13:28.76:345,29,0	1/1:4,8:11:18.06:253,18,0	0/0:25,0:25:35.71:0,36,321	0/0:20,1:22:5.46:0,5,341	0/0:14,0:16:32.60:0,33,336	0/0:15,0:15:32.92:0,33,301	1/1:7,14:25:47.52:533,48,0	1/1:8,6:14:11.53:135,12,0	1/1:4,10:15:24.08:323,24,0
chr10	86330758	.	C	CTCAGA	1582.45	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.721;DP=578;FS=2.109;HRun=0;HaplotypeScore=134.5797;InbreedingCoeff=0.9915;MQ=91.54;MQ0=0;MQRankSum=-1.162;QD=75.35;ReadPosRankSum=1.389;VQSLOD=5.1645;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,125,2769	0/0:7,0:7:21.07:0,21,450	0/0:29,0:29:79.76:0,80,1584	0/0:32,0:33:65.91:0,66,1593	0/0:27,0:27:63.21:0,63,1373	0/0:16,0:16:42.14:0,42,931	0/0:26,0:26:78.27:0,78,1799	0/0:25,0:25:72.23:0,72,1557	0/0:20,0:20:60.21:0,60,1372	0/0:14,0:14:39.10:0,39,859	0/0:12,0:12:36.12:0,36,838	0/0:17,0:17:51.17:0,51,1163	0/0:14,0:14:42.14:0,42,942	0/0:8,0:8:24.03:0,24,462	0/0:16,0:16:45.15:0,45,1045	0/0:14,0:14:42.14:0,42,979	0/0:35,0:35:99:0,102,2305	1/1:1,19:21:51.18:1677,51,0	0/0:15,0:14:42.14:0,42,946	0/0:13,0:13:39.09:0,39,836	0/0:35,0:35:99:0,99,2237	0/0:8,0:8:24.08:0,24,556	0/0:22,0:22:63.22:0,63,1467	0/0:29,0:29:87.30:0,87,2016	0/0:26,0:26:72.25:0,72,1663	0/0:13,0:13:39.12:0,39,833	0/0:25,0:25:75.23:0,75,1643	0/0:13,0:13:39.13:0,39,908
chr10	86330876	.	GT	G	4079.70	PASS	AB=0.969;AC=25;AF=0.446;AN=56;BaseQRankSum=8.861;DP=474;FS=17.902;HRun=7;HaplotypeScore=45.6619;InbreedingCoeff=0.8778;MQ=56.14;MQ0=12;MQRankSum=-1.400;QD=17.29;ReadPosRankSum=3.493;VQSLOD=2.0781;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,21:26:7.54:389,8,0	1/1:0,1:1:3.01:31,3,0	0/0:73,1:16:32.43:0,32,309	0/1:59,1:13:14.72:15,0,66	0/0:16,0:16:42.13:0,42,514	0/0:14,0:13:36.10:0,36,435	0/0:16,0:16:39.09:0,39,450	1/1:0,15:15:45.08:447,45,0	0/0:13,0:13:36.10:0,36,435	1/1:1,14:15:32.14:370,32,0	1/1:0,15:15:42.09:424,42,0	0/0:6,0:5:15.05:0,15,187	0/0:7,0:7:18.06:0,18,222	0/0:5,0:5:12.03:0,12,138	0/0:9,0:9:27.09:0,27,336	0/0:9,0:9:24.06:0,24,277	1/1:3,20:23:44.76:510,45,0	0/0:15,0:15:45.13:0,45,550	1/1:1,10:11:30.06:301,30,0	1/1:0,12:12:30.07:305,30,0	1/1:1,7:8:18:172,18,0	0/0:11,0:11:10.78:0,11,273	0/0:9,0:9:27.08:0,27,326	0/0:18,0:18:45.14:0,45,563	0/0:14,0:14:33.07:0,33,386	1/1:3,19:22:26.15:536,26,0	1/1:2,9:11:16.21:206,16,0	1/1:0,15:15:39:374,39,0
chr10	86331189	.	T	TA	829.15	PASS	AB=0.984;AC=12;AF=0.240;AN=50;BaseQRankSum=3.610;DP=266;FS=1.650;HRun=8;HaplotypeScore=47.8539;InbreedingCoeff=0.5106;MQ=54.28;MQ0=21;MQRankSum=-0.443;QD=9.11;ReadPosRankSum=1.216;VQSLOD=0.9790;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:10:5.03:25,0,5	1/1:0,3:3:3.01:35,3,0	0/0:15,0:3:6:0,6,55	0/0:16,0:8:4.56:0,5,21	0/0:9,0:6:12.01:0,12,110	0/0:16,0:15:39.01:0,39,357	0/0:9,0:5:8.85:0,9,62	./.	0/0:10,0:10:15:0,15,137	1/1:1,7:7:21.06:242,21,0	1/1:0,12:10:24.07:277,24,0	0/0:10,0:8:24.01:0,24,220	0/0:5,0:5:8.80:0,9,76	0/0:6,0:6:15.01:0,15,137	0/0:8,0:8:23.92:0,24,203	0/0:7,0:5:15.01:0,15,137	1/1:4,12:14:33.08:363,33,0	0/0:20,0:18:50.96:0,51,451	0/1:17,0:10:9.62:10,0,10	0/1:9,0:8:0.21:7,0,0	./.	./.	0/0:2,0:2:3:0,3,27	0/0:9,0:9:27.01:0,27,247	0/0:9,0:9:21:0,21,192	0/1:14,1:13:11.35:25,0,11	0/0:7,0:6:6.54:0,7,16	0/0:8,0:7:4.82:0,5,12
chr10	86331194	.	AAAAC	A	1035.88	PASS	AB=1.000;AC=11;AF=0.220;AN=50;BaseQRankSum=7.497;DP=268;FS=21.054;HRun=0;HaplotypeScore=59.8390;InbreedingCoeff=0.6916;MQ=56.86;MQ0=17;MQRankSum=-9.198;QD=12.48;ReadPosRankSum=-2.002;VQSLOD=1.0047;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,4:9:21.01:284,21,0	0/0:3,0:3:3.01:0,3,43	0/0:22,0:6:13.50:0,14,142	0/1:17,0:9:0.64:1,0,77	0/0:7,0:5:12.04:0,12,285	0/0:16,0:15:39.10:0,39,886	0/0:8,0:5:9.03:0,9,214	./.	0/0:9,0:9:21.05:0,21,453	0/0:8,0:7:6.80:0,7,244	0/0:13,0:11:13.38:0,13,308	0/0:10,0:8:24.08:0,24,572	0/0:5,0:5:9.01:0,9,214	0/0:7,0:7:18.06:0,18,418	0/0:8,0:8:24.01:0,24,519	0/0:7,0:6:14.31:0,14,336	0/0:15,0:14:37.36:0,37,514	0/0:20,0:18:51.13:0,51,1165	1/1:17,0:11:31.77:269,32,0	1/1:8,0:7:17.94:145,18,0	./.	./.	0/0:1,0:1:3.01:0,3,72	0/0:9,0:9:27.09:0,27,645	0/0:9,0:9:24.08:0,24,567	0/1:17,0:15:0.94:289,0,1	1/1:7,0:6:17.01:133,17,0	0/1:7,0:6:0.15:72,0,0
chr10	86331195	.	AAAC	A	1632.35	PASS	AB=1.000;AC=14;AF=0.280;AN=50;BaseQRankSum=6.728;DP=268;FS=16.657;HRun=0;HaplotypeScore=54.2775;InbreedingCoeff=0.6538;MQ=56.93;MQ0=15;MQRankSum=-9.152;QD=18.76;ReadPosRankSum=-2.613;VQSLOD=1.3426;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:9:20.98:196,21,0	0/0:3,0:3:3.01:0,3,30	0/0:22,0:6:5.20:0,5,100	0/0:16,0:9:1.31:0,1,59	0/0:7,0:5:12.04:0,12,235	0/0:17,0:16:39.08:0,39,763	0/0:8,0:5:9.03:0,9,176	./.	0/0:9,0:9:21.05:0,21,377	0/1:8,0:7:13.33:13,0,161	0/1:13,0:11:8.32:8,0,199	0/0:10,0:8:24.08:0,24,470	0/0:5,0:5:9:0,9,177	0/0:7,0:7:18.06:0,18,341	0/0:8,0:8:24.01:0,24,429	0/0:7,0:6:14.41:0,14,292	0/0:15,0:14:21.82:0,22,350	0/0:20,0:18:51.13:0,51,960	1/1:7,10:11:32.97:418,33,0	1/1:3,6:8:18.02:258,18,0	./.	./.	0/0:1,0:1:3.01:0,3,59	0/0:9,0:9:27.09:0,27,530	0/0:9,0:9:24.08:0,24,471	1/1:6,10:14:13.20:513,13,0	1/1:4,4:7:20.96:253,21,0	1/1:2,4:6:9.92:146,10,0
chr10	86331208	.	AAAC	A	580.93	PASS	AB=1.000;AC=12;AF=0.222;AN=54;BaseQRankSum=7.425;DP=268;FS=26.025;HRun=0;HaplotypeScore=66.5426;InbreedingCoeff=0.2370;MQ=68.47;MQ0=7;MQRankSum=-7.817;QD=7.35;ReadPosRankSum=-2.613;VQSLOD=0.5361;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,6:9:20.85:226,21,0	0/0:1,0:1:3.01:0,3,63	0/0:29,0:12:19.79:0,20,262	0/0:19,0:11:2.70:0,3,147	0/0:7,0:6:18.05:0,18,312	0/0:15,0:15:36.05:0,36,602	0/0:5,0:5:14.92:0,15,267	1/1:6,0:2:5.50:42,6,0	0/0:9,0:9:27.09:0,27,555	0/0:8,0:8:21.06:0,21,405	0/0:14,0:12:27.09:0,27,539	0/0:9,0:9:27.09:0,27,568	0/0:4,0:4:12.02:0,12,201	0/0:8,0:8:21.07:0,21,416	0/0:7,0:7:21.07:0,21,441	0/1:6,0:6:1.53:2,0,238	0/0:14,0:14:42.04:0,42,820	0/0:17,0:17:51.17:0,51,1048	0/1:18,0:13:28.38:121,0,28	0/1:9,0:9:6.75:39,0,7	1/1:2,0:2:0.89:2,1,0	./.	0/0:2,0:2:6.02:0,6,113	0/0:11,0:11:33.11:0,33,666	0/0:10,0:10:30.05:0,30,534	0/1:15,0:15:53.70:151,0,54	0/1:7,0:7:35.88:80,0,36	0/1:7,0:7:25.59:60,0,26
chr10	86331211	.	C	CA	1053.10	PASS	AB=0.833;AC=17;AF=0.315;AN=54;BaseQRankSum=6.994;DP=279;FS=24.567;HRun=9;HaplotypeScore=59.9255;InbreedingCoeff=0.7090;MQ=66.28;MQ0=7;MQRankSum=-7.500;QD=11.57;ReadPosRankSum=-2.918;VQSLOD=0.4453;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:7.36:26,7,0	0/0:1,0:1:3:0,3,26	0/0:26,0:11:7.86:0,8,108	0/0:19,0:12:3.53:0,4,52	0/0:8,0:7:17.98:0,18,152	0/0:11,0:13:28.07:0,28,220	0/1:4,1:5:18.18:18,0,89	1/1:5,4:5:9:88,9,0	0/0:10,0:10:26.98:0,27,234	0/0:7,0:7:21:0,21,182	0/0:15,0:13:26.99:0,27,234	0/0:9,0:9:26.98:0,27,230	0/0:4,0:4:5.99:0,6,52	0/0:9,0:9:20.99:0,21,182	0/0:7,0:7:21:0,21,182	0/0:5,0:5:11.68:0,12,103	0/0:14,0:14:38.97:0,39,333	0/0:17,0:17:44.96:0,45,386	1/1:10,9:15:3.35:252,3,0	1/1:5,5:10:15:152,15,0	1/1:0,3:3:0.47:1,0,0	./.	0/0:2,0:2:6:0,6,52	0/0:11,0:11:32.99:0,33,286	0/0:10,0:10:23.99:0,24,208	1/1:3,13:16:13.05:372,13,0	1/1:2,9:11:18.02:187,18,0	1/1:3,4:7:12.03:132,12,0
chr10	86331862	.	TAC	T	611.25	PASS	AB=0.902;AC=16;AF=0.320;AN=50;BaseQRankSum=4.974;DP=409;FS=4.874;HRun=0;HaplotypeScore=60.9923;InbreedingCoeff=0.0925;MQ=58.22;MQ0=9;MQRankSum=1.312;QD=3.23;ReadPosRankSum=2.639;VQSLOD=1.3885;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:18.03:0,18,207	0/0:7,0:7:3:0,3,29	./.	./.	0/0:18,0:19:6.07:0,6,192	0/1:20,0:20:14.40:14,0,186	0/1:26,3:29:40.80:41,0,180	0/1:18,0:18:0:0,0,0	0/1:12,1:13:11.38:11,0,185	0/0:15,0:17:29.86:0,30,258	0/0:13,0:13:2.99:0,3,24	0/0:14,0:14:15.50:0,16,175	0/1:8,1:9:18.37:18,0,103	0/0:5,0:5:8.95:0,9,113	0/0:13,0:13:24.04:0,24,297	0/1:11,2:15:40.69:41,0,219	0/0:20,0:20:12.84:0,13,101	1/1:8,2:11:14.98:98,15,0	./.	0/1:13,1:14:26.37:26,0,27	0/1:8,4:12:10.90:85,0,11	0/0:20,0:20:26.97:0,27,382	0/0:14,0:14:12.03:0,12,158	0/1:13,1:14:17.38:17,0,163	0/0:5,1:6:6.01:0,6,69	0/1:11,4:15:4.93:109,0,5	1/1:5,6:12:14.87:144,15,0	1/1:0,5:5:15.04:162,15,0
chr10	86331905	.	A	ACG	2982.46	PASS	AB=0.988;AC=21;AF=0.375;AN=56;BaseQRankSum=1.434;DP=528;FS=2.426;HRun=0;HaplotypeScore=85.7765;InbreedingCoeff=0.7398;MQ=55.52;MQ0=7;MQRankSum=-2.112;QD=12.75;ReadPosRankSum=-0.993;VQSLOD=3.4032;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:23:12.72:230,0,13	1/1:1,5:7:5.61:44,6,0	0/0:11,0:6:8.18:0,8,116	0/0:15,0:12:20.34:0,20,194	0/0:29,0:29:62.74:0,63,568	0/0:18,0:18:35.94:0,36,370	0/0:20,0:20:44.85:0,45,415	1/1:29,0:28:73.77:546,74,0	0/0:19,0:18:39.41:0,39,384	0/1:25,1:25:16.96:394,0,17	1/1:18,0:18:26.90:224,27,0	0/0:25,0:25:48.29:0,48,420	0/0:14,0:14:41.76:0,42,378	0/0:13,0:13:32.96:0,33,308	0/0:19,0:19:45.02:0,45,478	0/0:19,0:19:25.66:0,26,420	0/1:27,0:27:25.26:199,0,25	0/0:20,0:18:41.39:0,41,332	1/1:21,0:18:43.63:356,44,0	1/1:16,0:16:23.23:239,23,0	1/1:16,0:16:10.33:193,10,0	0/0:24,0:24:48.26:0,48,472	0/0:14,0:14:30:0,30,311	0/0:18,0:17:38.95:0,39,395	0/0:16,0:16:32.98:0,33,296	1/1:20,0:20:34.38:355,34,0	1/1:22,0:22:47.70:320,48,0	1/1:8,0:8:15.68:92,16,0
chr10	86332530	.	G	GC	535.37	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.978;DP=638;FS=0.968;HRun=3;HaplotypeScore=64.0142;InbreedingCoeff=0.9992;MQ=86.59;MQ0=0;MQRankSum=0.560;QD=31.49;ReadPosRankSum=0.096;VQSLOD=3.5083;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,153,1824	0/0:11,0:11:33.07:0,33,381	0/0:20,0:21:50.72:0,51,585	0/0:26,0:26:74.89:0,75,859	0/0:18,0:18:51.14:0,51,600	0/0:19,0:19:54.15:0,54,636	0/0:24,0:24:66.19:0,66,780	0/0:32,0:32:84.24:0,84,990	0/0:15,0:15:45.14:0,45,540	0/0:26,0:26:69.20:0,69,819	0/0:18,0:18:54.17:0,54,648	0/0:29,0:29:87.27:0,87,1043	0/0:28,0:28:81.25:0,81,972	0/0:24,0:24:69.21:0,69,828	0/0:20,0:20:60.14:0,60,692	0/0:19,0:19:57.14:0,57,669	0/0:29,0:29:84.26:0,84,1008	1/1:0,17:17:45.15:630,45,0	0/0:33,0:33:90.26:0,90,1068	0/0:14,0:14:42.13:0,42,504	0/0:33,0:33:93.28:0,93,1115	0/0:18,0:18:48.15:0,48,574	0/0:14,0:14:36.10:0,36,431	0/0:32,0:32:93.27:0,93,1105	0/0:11,0:11:33.10:0,33,396	0/0:18,0:18:48.15:0,48,576	0/0:15,0:15:39.12:0,39,467	0/0:19,0:19:48.15:0,48,576
chr10	86332949	.	ACT	A	513.93	PASS	AB=1.000;AC=18;AF=0.346;AN=52;BaseQRankSum=-1.309;DP=596;FS=7.538;HRun=0;HaplotypeScore=84.1185;InbreedingCoeff=0.2600;MQ=65.84;MQ0=26;MQRankSum=0.374;QD=2.10;ReadPosRankSum=2.164;VQSLOD=0.8598;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:20.89:0,21,312	0/0:12,0:12:11.87:0,12,83	./.	./.	1/1:20,0:20:26.25:189,26,0	1/1:12,0:12:17.90:134,18,0	1/1:16,12:27:5.81:32,6,0	0/0:29,0:28:2.97:0,3,20	1/1:13,0:12:17.93:141,18,0	0/1:27,0:26:0.30:0,0,153	0/0:20,0:18:14.36:0,14,108	0/1:18,0:18:29.85:30,0,82	0/1:13,0:13:11.02:11,0,63	0/1:19,0:19:3.77:4,0,103	0/1:18,0:17:33.01:47,0,33	0/0:17,0:16:20.85:0,21,159	0/0:26,0:23:26.90:0,27,213	0/0:15,0:14:14.91:0,15,126	0/0:16,0:15:8.95:0,9,69	0/0:20,0:20:6.46:0,6,51	0/0:25,0:23:17.92:0,18,139	0/1:24,0:24:18.02:18,0,145	1/1:8,0:14:2.98:21,3,0	0/1:26,0:24:44.70:45,0,85	0/1:13,0:12:6.88:7,0,68	0/0:36,0:36:21.31:0,21,325	0/0:14,0:14:14.84:0,15,109	0/0:17,0:16:5.84:0,6,39
chr10	86333591	.	C	CA	3630.90	PASS	AB=0.845;AC=25;AF=0.446;AN=56;BaseQRankSum=-6.818;DP=491;FS=8.491;HRun=11;HaplotypeScore=47.7646;InbreedingCoeff=0.7150;MQ=52.11;MQ0=31;MQRankSum=0.737;QD=13.96;ReadPosRankSum=-3.515;VQSLOD=2.0105;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,18:27:24.53:401,25,0	1/1:3,9:12:27.05:274,27,0	0/1:7,0:2:7.73:8,0,17	0/0:4,0:2:2.99:0,3,23	0/0:23,0:22:49.84:0,50,377	0/1:19,3:21:14.05:14,0,261	0/0:23,0:23:52.83:0,53,401	1/1:5,14:18:18.85:373,19,0	0/0:18,0:17:38.83:0,39,302	1/1:3,11:15:15.67:319,16,0	1/1:7,9:15:6.64:225,7,0	0/0:16,0:14:20.88:0,21,162	0/0:14,0:13:26.85:0,27,209	0/0:9,0:10:19.94:0,20,145	0/0:13,1:13:1.47:0,1,185	0/0:16,0:17:40.88:0,41,308	1/1:11,17:25:42.08:426,42,0	0/0:16,0:16:35.82:0,36,277	0/1:9,10:18:27.55:253,0,28	1/1:8,9:14:22.73:219,23,0	1/1:6,7:11:18.04:183,18,0	0/0:14,0:15:31.92:0,32,238	0/0:19,1:19:23.33:0,23,357	0/0:23,1:23:21.20:0,21,342	0/0:13,2:13:8.41:0,8,248	1/1:7,17:20:42.08:426,42,0	1/1:13,7:18:23.65:199,24,0	1/1:3,11:13:32.89:312,33,0
chr10	86333821	.	CGTGT	C	327.60	PASS	AB=0.956;AC=21;AF=0.457;AN=46;BaseQRankSum=-1.030;DP=394;FS=9.940;HRun=0;HaplotypeScore=74.1892;InbreedingCoeff=0.1308;MQ=36.48;MQ0=125;MQRankSum=-0.900;QD=1.50;ReadPosRankSum=3.717;VQSLOD=-0.1842;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:11:3:27,3,0	0/1:7,0:7:13.29:13,0,80	./.	./.	0/0:10,0:10:0:0,0,0	0/0:11,0:6:3.01:0,3,37	0/0:9,0:8:2.87:0,3,29	0/1:19,0:8:0.84:1,0,12	0/0:9,0:8:6.02:0,6,141	0/1:17,0:16:54.05:126,0,54	0/1:18,0:18:0:0,0,0	0/1:16,0:10:16.43:16,0,64	1/1:9,8:12:3.48:50,3,0	0/0:11,0:9:2.94:0,3,18	0/0:13,0:11:3.01:0,3,72	./.	0/1:21,0:12:7.97:8,0,25	0/0:16,0:5:3.01:0,3,34	1/1:16,0:10:1.25:3,1,0	1/1:4,6:10:3.01:48,3,0	./.	0/0:15,0:15:5.93:0,6,56	./.	0/1:20,0:12:0:1,0,0	0/0:11,0:11:3.01:0,3,66	1/1:12,2:5:3.01:42,3,0	1/1:6,2:7:6.01:76,6,0	1/1:13,0:10:3.01:39,3,0
chr10	86333849	.	T	TGTGC	303.65	PASS	AB=0.958;AC=9;AF=0.161;AN=56;BaseQRankSum=-0.438;DP=450;FS=7.871;HRun=0;HaplotypeScore=94.4035;InbreedingCoeff=0.3026;MQ=35.28;MQ0=138;MQRankSum=1.683;QD=3.53;ReadPosRankSum=0.081;VQSLOD=1.2670;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:11:2.80:0,3,13	0/1:6,1:6:16.79:74,0,17	0/0:18,0:3:0.50:0,1,38	0/0:32,0:4:5.81:0,6,51	0/1:16,0:14:0:0,0,0	0/0:18,0:14:3.01:0,3,55	0/0:11,0:8:3.83:0,4,30	0/0:10,0:3:5.87:0,6,35	0/0:14,0:11:5.75:0,6,81	1/1:22,0:21:5.62:286,6,0	0/0:20,3:22:0.38:0,0,1	0/0:20,0:12:8.97:0,9,109	0/0:22,0:16:11.70:0,12,69	0/0:12,0:8:2.94:0,3,18	0/0:11,0:9:3.01:0,3,56	0/0:9,0:5:0:0,0,0	1/1:18,0:7:5.82:36,6,0	0/0:16,0:3:3.01:0,3,30	0/0:13,0:7:17.76:0,18,117	0/0:14,0:14:6.17:0,6,49	0/0:17,0:3:0.47:0,0,1	0/0:24,0:23:4.62:0,5,61	0/1:15,0:15:0:0,0,1	0/0:20,0:11:0.47:0,0,2	0/0:11,0:11:3.01:0,3,50	0/0:17,0:9:6.90:0,7,110	0/0:15,0:13:24:0,24,185	1/1:6,0:3:1.67:17,2,0
chr10	86333853	.	TGTGC	T	423.28	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-1.138;DP=448;FS=3.499;HRun=0;HaplotypeScore=90.1915;InbreedingCoeff=-0.0245;MQ=35.31;MQ0=137;MQRankSum=0.179;QD=1.50;ReadPosRankSum=-1.281;VQSLOD=1.6413;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,11:12:3.01:45,3,0	0/0:8,0:7:3.45:0,3,65	0/1:21,0:3:1.60:2,0,3	0/1:31,0:4:3.11:23,0,3	0/0:17,0:16:0:0,0,0	0/0:17,0:13:2.95:0,3,19	0/0:11,0:8:2.55:0,3,10	0/1:12,0:4:7.99:18,0,8	0/0:14,0:11:6.02:0,6,134	0/1:20,0:20:4.73:178,0,5	0/1:22,0:21:0.14:0,0,0	0/1:19,0:11:30.75:31,0,73	1/1:21,0:15:5.81:77,6,0	0/0:12,0:8:2.77:0,3,18	0/0:11,0:9:3.01:0,3,79	0/0:9,0:5:2.50:0,2,9	0/1:20,0:7:13.97:14,0,27	0/0:15,0:3:2.97:0,3,20	0/1:12,0:6:22:22,0,68	0/1:14,0:14:6.30:25,0,6	0/0:17,0:3:0:0,0,0	0/0:24,0:23:5.28:0,5,30	0/1:15,0:15:0.20:0,0,0	0/1:19,0:11:0:1,0,0	0/0:10,0:10:3.01:0,3,51	0/1:17,0:9:26.55:27,0,33	0/1:15,0:13:24.01:68,0,24	1/1:8,0:3:4.20:23,4,0
chr10	86334405	.	GCTGGAAGCCAGC	G	1689.26	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.612;DP=511;FS=8.465;HRun=0;HaplotypeScore=171.8991;InbreedingCoeff=0.9794;MQ=74.31;MQ0=0;MQRankSum=-6.850;QD=84.46;ReadPosRankSum=-0.988;VQSLOD=2.9868;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:51.17:1784,51,0	0/0:5,0:5:15.05:0,15,672	0/0:20,0:21:59.69:0,60,2626	0/0:27,0:27:69.24:0,69,3228	0/0:10,0:10:30.10:0,30,1611	0/0:13,0:13:39.13:0,39,2283	0/0:22,0:22:57.20:0,57,3250	0/0:23,0:23:60.20:0,60,3299	0/0:27,0:27:75.26:0,75,4265	0/0:17,0:17:48.16:0,48,2536	0/0:17,0:17:48.16:0,48,2644	0/0:19,0:19:57.20:0,57,3360	0/0:19,0:19:54.19:0,54,3185	0/0:15,0:15:45.15:0,45,2450	0/0:25,0:25:63.22:0,63,3830	0/0:21,0:21:63.20:0,63,3705	0/0:24,0:24:63.22:0,63,3489	0/0:13,0:13:39.13:0,39,2207	0/0:14,0:14:33.11:0,33,1953	0/0:14,0:14:42.14:0,42,2374	0/0:21,0:21:63.22:0,63,3698	0/0:17,0:17:45.15:0,45,2572	0/0:13,0:13:33.11:0,33,1987	0/0:34,0:34:99:0,99,5796	0/0:16,0:16:45.15:0,45,2720	0/0:14,0:14:39.13:0,39,2295	0/0:23,0:23:54.17:0,54,2948	0/0:7,0:7:21.07:0,21,1088
chr10	86334443	.	C	CATAGATAG	6444.25	PASS	AC=26;AF=0.500;AN=52;BaseQRankSum=5.869;DP=590;FS=7.435;HRun=0;HaplotypeScore=178.7436;InbreedingCoeff=0.9032;MQ=58.89;MQ0=3;MQRankSum=-6.932;QD=21.77;ReadPosRankSum=-4.026;VQSLOD=3.0491;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:25,3:27:9.03:273,9,0	1/1:7,0:7:5.38:28,5,0	./.	./.	0/0:19,0:19:36.12:0,36,818	0/0:15,0:14:18.06:0,18,407	0/0:26,0:26:30.09:0,30,583	1/1:36,0:35:9.01:109,9,0	0/0:27,0:27:30.09:0,30,617	1/1:15,6:25:42.07:1172,42,0	1/1:18,9:27:21.07:839,21,0	0/0:18,0:19:5.72:0,6,614	0/0:15,0:15:12.04:0,12,272	0/0:16,0:16:24.08:0,24,589	1/1:13,0:27:23.94:195,24,0	0/0:15,0:16:9.02:0,9,154	1/1:13,3:17:12.04:451,12,0	0/0:10,0:10:18.04:0,18,360	1/1:16,0:21:18.04:463,18,0	1/1:23,1:31:18.06:652,18,0	1/1:18,0:18:9.03:203,9,0	0/0:22,0:22:30.10:0,30,690	0/0:20,0:20:30.09:0,30,690	0/0:24,0:24:21.07:0,21,490	0/0:19,0:19:33.11:0,33,813	1/1:22,0:27:45.15:1434,45,0	1/1:21,0:21:12.04:323,12,0	1/1:9,1:11:9.03:302,9,0
chr10	86335858	.	C	CATTA	697.48	PASS	AC=2;AF=0.040;AN=50;BaseQRankSum=2.555;DP=370;FS=0.000;HRun=0;HaplotypeScore=61.9920;InbreedingCoeff=0.5263;MQ=64.50;MQ0=0;MQRankSum=1.321;QD=49.82;ReadPosRankSum=0.187;VQSLOD=3.7031;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,11:14:33.11:790,33,0	0/0:1,0:1:3.01:0,3,49	./.	./.	0/0:25,0:25:48.13:0,48,730	0/0:20,0:20:39.13:0,39,632	0/0:5,0:5:9.01:0,9,121	0/0:25,0:25:30.10:0,30,480	0/0:16,0:16:30.10:0,30,485	0/0:15,0:15:30.10:0,30,485	0/0:12,0:12:27.09:0,27,438	0/0:13,0:13:24.08:0,24,386	0/0:11,0:11:15.05:0,15,243	0/0:8,0:8:9.03:0,9,146	0/0:12,0:12:18.06:0,18,292	0/0:7,0:7:12.04:0,12,195	0/0:28,0:28:57.15:0,57,874	0/0:23,0:23:48.16:0,48,778	0/0:26,0:26:33.10:0,33,510	0/0:8,0:8:15.05:0,15,243	0/0:3,0:3:3.01:0,3,49	./.	0/0:4,0:4:3.01:0,3,49	0/0:8,0:8:6.02:0,6,97	0/0:12,0:12:33.10:0,33,512	0/0:22,0:22:42.14:0,42,681	0/0:26,0:26:51.08:0,51,825	0/0:16,0:16:27.09:0,27,438
chr10	86336737	.	GT	G	1518.43	PASS	AB=0.813;AC=8;AF=0.143;AN=56;BaseQRankSum=-0.425;DP=436;FS=0.574;HRun=1;HaplotypeScore=74.1206;InbreedingCoeff=0.6865;MQ=73.32;MQ0=5;MQRankSum=-1.487;QD=27.61;ReadPosRankSum=1.672;VQSLOD=3.5133;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:88.02:0,88,505	1/1:0,2:2:6.02:84,6,0	0/0:27,0:24:69.11:0,69,816	0/0:28,0:23:65.89:0,66,693	0/0:11,0:11:30.05:0,30,361	0/0:13,0:13:39.11:0,39,536	0/0:23,0:23:66.14:0,66,826	0/0:20,0:20:36.28:0,36,367	0/0:18,0:18:51.10:0,51,652	1/1:0,12:11:33.10:442,33,0	0/1:2,3:4:14.50:113,0,14	0/0:13,0:13:39.07:0,39,500	0/0:13,0:13:39.11:0,39,522	0/0:13,0:13:33.10:0,33,468	0/0:9,0:9:21.05:0,21,282	0/0:10,0:10:27.01:0,27,323	1/1:5,23:26:75.21:969,75,0	0/1:8,0:8:1.11:57,0,1	0/0:6,0:6:17.68:0,18,123	0/0:8,0:8:17.45:0,17,97	0/0:27,0:27:66.25:0,66,364	0/0:11,0:11:0.01:0,0,232	0/0:12,0:12:35.97:0,36,411	0/0:27,0:27:69.16:0,69,895	0/0:10,0:10:29.94:0,30,367	0/0:19,0:19:50.39:0,50,360	0/0:17,0:17:35.54:0,36,181	0/0:7,0:7:11.53:0,12,61
chr10	86336738	.	TGG	T	3687.45	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=3.860;DP=433;FS=0.436;HRun=8;HaplotypeScore=73.4234;InbreedingCoeff=0.9552;MQ=73.59;MQ0=5;MQRankSum=-0.227;QD=26.34;ReadPosRankSum=0.998;VQSLOD=3.3027;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,31:37:93.06:1046,93,0	0/0:2,0:2:5.96:0,6,44	0/0:28,0:25:41.08:0,41,686	0/0:27,0:23:50.99:0,51,609	0/0:11,0:11:27.06:0,27,381	0/0:13,0:13:35.99:0,36,573	0/0:23,0:23:63.15:0,63,896	1/1:5,15:20:44.82:464,45,0	0/0:18,0:18:45.12:0,45,688	0/0:12,0:11:14.04:0,14,183	0/0:4,0:4:11.94:0,12,91	0/0:13,0:13:36.10:0,36,559	0/0:13,0:13:36.11:0,36,575	0/0:13,0:13:39.07:0,39,581	0/0:9,0:9:24.03:0,24,351	0/0:10,0:10:18.05:0,18,281	0/0:27,0:26:63.70:0,64,435	0/0:8,0:8:21.02:0,21,214	1/1:2,4:6:11.98:128,12,0	1/1:1,7:8:15.04:182,15,0	1/1:2,25:27:63.19:767,63,0	0/0:9,0:10:14.69:0,15,237	0/0:12,0:12:27.03:0,27,376	0/0:27,0:27:60.19:0,60,963	0/0:10,0:10:27.06:0,27,400	1/1:4,15:19:45.07:498,45,0	1/1:0,17:17:39.05:456,39,0	1/1:0,6:6:12.04:146,12,0
chr10	86336913	.	G	GTAAC	264.49	PASS	AB=0.871;AC=5;AF=0.104;AN=48;BaseQRankSum=2.808;DP=129;FS=5.875;HRun=0;HaplotypeScore=47.1046;InbreedingCoeff=0.1646;MQ=88.08;MQ0=5;MQRankSum=3.240;QD=6.45;ReadPosRankSum=-0.942;VQSLOD=0.6395;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:8:6.02:0,6,112	0/0:1,0:1:3.01:0,3,56	1/1:11,2:6:3.65:145,4,0	0/1:23,4:12:44.86:208,0,45	1/1:1,0:1:0.47:1,0,0	0/0:3,0:3:6.02:0,6,125	0/0:3,0:3:3.01:0,3,62	0/0:6,0:6:13.68:0,14,171	0/0:4,0:4:6.02:0,6,111	0/0:1,0:1:3.01:0,3,63	./.	0/0:3,0:3:8.98:0,9,109	0/0:3,0:2:3.01:0,3,62	0/0:4,0:4:11.99:0,12,162	0/0:5,0:5:11.98:0,12,135	0/0:3,0:3:9.02:0,9,151	0/0:6,0:6:15.03:0,15,252	0/0:4,0:4:11.78:0,12,182	0/0:4,0:3:9.03:0,9,188	./.	0/0:7,0:7:11.13:0,11,140	0/0:6,0:6:9.03:0,9,188	0/0:3,0:3:9.03:0,9,188	0/0:7,0:6:12.50:0,13,212	0/0:1,0:1:3.01:0,3,63	0/0:1,0:1:3.01:0,3,63	./.	./.
chr10	86337072	.	AG	A	5431.82	PASS	AB=0.700;AC=49;AF=0.875;AN=56;BaseQRankSum=-3.541;DP=255;FS=8.939;HRun=3;HaplotypeScore=45.0501;InbreedingCoeff=0.5463;MQ=62.40;MQ0=6;MQRankSum=0.734;QD=28.29;ReadPosRankSum=3.045;VQSLOD=3.2735;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:16:34.99:450,35,0	1/1:0,4:4:12.04:156,12,0	0/0:22,1:8:2.95:0,3,50	0/0:36,0:10:13.91:0,14,159	1/1:0,11:11:27.09:345,27,0	1/1:0,3:3:9.03:117,9,0	1/1:4,11:15:33.10:407,33,0	1/1:2,10:12:30.07:373,30,0	1/1:1,5:6:12.04:154,12,0	1/1:0,6:6:18.05:220,18,0	1/1:1,4:4:12.04:150,12,0	0/1:4,3:7:32.60:104,0,33	1/1:2,4:6:15.04:176,15,0	1/1:0,5:5:15.05:195,15,0	1/1:7,5:11:24:268,24,0	1/1:0,3:2:6.02:78,6,0	1/1:2,5:7:12.03:146,12,0	1/1:3,1:4:12.02:132,12,0	1/1:0,6:6:18.06:233,18,0	0/0:1,3:4:3.01:0,3,45	1/1:1,20:21:29.79:390,30,0	1/1:0,9:9:24.08:307,24,0	1/1:0,4:4:9.03:117,9,0	1/1:2,7:9:24.08:304,24,0	1/1:0,7:9:22.37:248,22,0	1/1:0,6:6:18.06:234,18,0	1/1:0,3:3:5.85:53,6,0	1/1:0,3:3:6.02:78,6,0
chr10	86337074	.	GA	G	2331.83	PASS	AB=0.909;AC=48;AF=0.857;AN=56;BaseQRankSum=-0.797;DP=269;FS=6.079;HRun=1;HaplotypeScore=57.1337;InbreedingCoeff=0.2259;MQ=63.46;MQ0=7;MQRankSum=1.046;QD=10.32;ReadPosRankSum=2.798;VQSLOD=1.6084;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:37.43:207,37,0	0/1:5,0:5:10.25:55,0,10	0/1:22,1:8:3.42:3,0,52	0/0:39,0:11:5.55:0,6,157	1/1:11,0:11:26.13:155,26,0	1/1:3,0:3:8.84:62,9,0	1/1:12,4:16:31.80:234,32,0	1/1:13,0:13:24.74:103,25,0	1/1:5,1:6:11.79:99,12,0	1/1:6,0:6:13.57:87,14,0	1/1:5,0:4:11.57:65,12,0	0/1:5,2:7:33:57,0,33	1/1:5,1:6:14.75:124,15,0	1/1:6,0:6:14.28:73,14,0	1/1:7,5:11:23.56:219,24,0	1/1:3,0:2:5.68:28,6,0	0/1:8,1:9:29.27:66,0,29	1/1:3,1:4:8.18:73,8,0	1/1:6,0:6:16.89:87,17,0	0/0:4,0:4:3.01:0,3,46	1/1:23,0:23:28.01:151,28,0	1/1:10,0:10:0.06:99,0,0	1/1:4,0:4:8.52:43,9,0	1/1:9,1:9:23.62:184,24,0	1/1:9,0:9:6.46:70,6,0	1/1:6,0:6:16.33:73,16,0	1/1:5,0:5:1.20:11,1,0	1/1:3,0:3:5.93:40,6,0
chr10	86338478	.	G	GA	2593.60	PASS	AB=0.827;AC=15;AF=0.268;AN=56;BaseQRankSum=-8.511;DP=457;FS=0.000;HRun=9;HaplotypeScore=50.7483;InbreedingCoeff=0.5413;MQ=72.02;MQ0=0;MQRankSum=-0.471;QD=15.53;ReadPosRankSum=-1.704;VQSLOD=3.0713;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:69.25:0,69,795	0/1:7,1:8:15.22:15,0,105	0/0:11,0:10:1.69:0,2,81	0/1:13,0:13:32.82:33,0,124	0/0:10,0:10:24.46:0,24,209	0/0:17,0:18:47.02:0,47,397	0/0:28,0:29:66.11:0,66,661	1/1:9,19:29:8.03:508,8,0	0/0:10,0:10:23.98:0,24,208	0/0:19,0:19:47.95:0,48,408	0/1:11,0:11:0.41:0,0,157	0/0:16,0:16:44.99:0,45,390	0/0:9,0:9:23.98:0,24,208	0/0:13,0:13:29.97:0,30,260	0/0:11,0:11:26.98:0,27,231	0/0:17,0:17:38.97:0,39,338	0/0:29,0:29:77.94:0,78,668	0/0:13,0:13:29.96:0,30,260	1/1:2,11:14:26.08:305,26,0	1/1:2,9:11:24.06:265,24,0	1/1:2,18:20:42.11:465,42,0	0/0:10,0:10:19.60:0,20,179	0/0:10,0:10:23.98:0,24,207	0/0:12,0:12:29.99:0,30,260	0/0:17,0:17:42.88:0,43,366	0/1:6,14:20:26.73:404,0,27	1/1:2,24:26:19.97:660,20,0	0/1:8,5:13:11.01:118,0,11
chr10	86340068	.	T	TA	1899.66	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.675;DP=465;FS=0.000;HRun=4;HaplotypeScore=57.0552;InbreedingCoeff=0.9738;MQ=64.67;MQ0=2;MQRankSum=-0.234;QD=31.14;ReadPosRankSum=1.448;VQSLOD=3.8606;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:60.17:0,60,676	1/1:0,5:5:12.04:159,12,0	0/0:14,0:9:23.10:0,23,199	0/0:9,0:6:11.84:0,12,124	0/0:29,0:29:72.20:0,72,812	0/0:14,0:14:42.11:0,42,466	0/0:11,0:10:24.07:0,24,271	0/0:27,0:27:69.05:0,69,734	0/0:14,0:14:36.10:0,36,406	1/1:0,20:20:60.15:737,60,0	1/1:0,13:13:39.04:495,39,0	0/0:5,0:5:15.03:0,15,160	0/0:7,0:7:21.06:0,21,237	0/0:12,0:12:27.07:0,27,305	0/0:13,0:13:36.06:0,36,381	0/0:21,0:21:60.17:0,60,678	1/1:2,21:23:51.16:666,51,0	0/0:20,0:19:51.15:0,51,575	0/0:19,0:19:57.16:0,57,637	0/0:20,0:20:57.16:0,57,644	0/0:10,0:10:21.06:0,21,237	0/0:10,0:10:27.08:0,27,305	0/0:13,0:13:33.09:0,33,372	0/0:12,0:12:33.05:0,33,358	0/0:27,0:27:69.13:0,69,739	0/0:19,0:19:42.10:0,42,459	0/0:35,0:35:97.14:0,97,1069	0/0:19,0:19:54.15:0,54,609
chr10	86340259	.	AT	A	1052.92	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.717;DP=481;FS=3.352;HRun=10;HaplotypeScore=55.6132;InbreedingCoeff=0.9086;MQ=66.45;MQ0=0;MQRankSum=1.767;QD=17.26;ReadPosRankSum=0.723;VQSLOD=4.2007;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:86.71:0,87,912	1/1:1,8:9:24:208,24,0	0/0:16,0:14:3.86:0,4,234	0/0:9,0:8:12.02:0,12,129	0/0:38,0:38:99:0,103,1122	0/0:12,0:12:10.04:0,10,332	0/0:13,0:13:33.09:0,33,365	0/0:32,0:32:81.19:0,81,879	0/0:9,0:11:29.75:0,30,294	1/1:2,16:18:44.98:391,45,0	1/1:2,10:12:29.98:260,30,0	0/0:7,0:7:21.06:0,21,232	0/0:14,0:14:42.11:0,42,457	0/0:11,0:12:35.92:0,36,371	0/0:13,0:13:36.10:0,36,398	0/0:12,1:13:10.03:0,10,332	1/1:4,17:22:29.42:353,29,0	0/0:34,0:34:55.27:0,55,836	0/0:24,0:24:54.14:0,54,590	0/0:15,0:15:42.11:0,42,465	0/0:10,0:10:27.06:0,27,289	0/0:14,0:17:49.16:0,49,494	0/0:6,0:6:9.02:0,9,92	0/0:17,0:17:45.11:0,45,490	0/0:8,0:10:20.87:0,21,200	0/0:23,0:23:63.15:0,63,686	0/0:24,0:24:69.14:0,69,748	0/0:16,0:16:42.08:0,42,452
chr10	86340569	.	GT	G	1323.55	PASS	AB=0.914;AC=16;AF=0.286;AN=56;BaseQRankSum=5.904;DP=553;FS=1.376;HRun=12;HaplotypeScore=75.0347;InbreedingCoeff=0.4973;MQ=72.67;MQ0=1;MQRankSum=2.236;QD=5.70;ReadPosRankSum=1.567;VQSLOD=2.1879;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:27:34.58:100,35,0	1/1:1,13:14:35.85:279,36,0	0/1:20,1:20:4.44:4,0,167	0/1:18,1:14:37.13:37,0,118	0/1:21,2:24:10.72:11,0,364	0/0:17,0:18:29.86:0,30,268	0/0:20,1:21:21.85:0,22,401	0/0:22,2:25:13.27:0,13,435	0/0:12,1:13:21.04:0,21,208	1/1:12,19:31:5.67:343,6,0	1/1:2,14:16:35.76:274,36,0	0/0:12,0:12:27.05:0,27,270	0/0:19,0:19:47.90:0,48,423	0/0:14,0:16:35.90:0,36,343	0/0:12,0:12:28.11:0,28,301	0/1:11,2:13:22.44:22,0,148	1/1:4,20:25:55.82:423,56,0	0/0:13,1:14:6.96:0,7,251	0/1:18,2:20:7.26:7,0,238	0/0:19,0:19:41.91:0,42,368	0/0:19,0:19:54.07:0,54,522	0/0:22,3:25:47.98:0,48,441	0/0:11,0:14:23.80:0,24,214	0/0:19,0:21:35.90:0,36,344	0/0:18,0:18:39.04:0,39,368	0/0:34,3:37:22.57:0,23,566	0/1:16,3:22:1.72:2,0,295	0/0:17,0:18:27.36:0,27,402
chr10	86341118	.	TTTTA	T	1183.31	PASS	AB=0.950;AC=14;AF=0.250;AN=56;BaseQRankSum=3.921;DP=328;FS=1.151;HRun=0;HaplotypeScore=60.6446;InbreedingCoeff=0.6960;MQ=58.69;MQ0=6;MQRankSum=-5.035;QD=12.72;ReadPosRankSum=-3.296;VQSLOD=2.2778;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:34.91:0,35,608	0/0:7,0:7:21.06:0,21,439	0/0:20,0:5:2.15:0,2,8	0/0:24,0:7:5.24:0,5,76	0/0:13,0:12:10.12:0,10,431	0/0:6,0:6:16.87:0,17,290	0/0:10,0:10:10.09:0,10,352	1/1:31,0:31:39.56:401,40,0	0/0:10,0:10:26.65:0,27,458	0/0:16,0:15:40.96:0,41,721	0/0:7,0:7:21.02:0,21,436	0/0:6,0:6:11.87:0,12,237	0/1:7,0:7:1.75:2,0,187	0/0:3,0:3:9.03:0,9,140	0/0:6,0:6:9.01:0,9,162	0/0:8,0:8:16.39:0,16,248	0/0:30,0:30:35.16:0,35,940	0/0:14,0:14:36.50:0,36,640	1/1:14,2:15:41.87:408,42,0	1/1:8,0:8:15.81:106,16,0	0/1:8,1:9:11.26:105,0,11	0/0:1,0:1:3.01:0,3,69	0/0:10,0:10:19.87:0,20,477	0/0:11,0:10:27:0,27,484	0/0:11,0:11:20.92:0,21,384	1/1:10,1:11:23.97:234,24,0	1/1:7,0:7:5.67:34,6,0	1/1:4,0:4:8.97:70,9,0
chr10	86341119	.	TTTA	T	1834.64	PASS	AB=0.967;AC=17;AF=0.304;AN=56;BaseQRankSum=2.455;DP=337;FS=4.811;HRun=0;HaplotypeScore=54.2100;InbreedingCoeff=0.7003;MQ=58.01;MQ0=9;MQRankSum=-4.744;QD=14.80;ReadPosRankSum=-3.519;VQSLOD=2.3043;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:34.36:0,34,413	0/0:7,0:7:21.06:0,21,361	1/1:20,0:5:1.93:7,2,0	0/0:24,0:7:12.12:0,12,92	0/0:14,0:13:12.89:0,13,366	0/0:6,0:6:16.24:0,16,219	0/0:10,0:10:7.18:0,7,257	1/1:27,5:32:67.49:600,67,0	0/0:10,0:10:24.73:0,25,344	0/0:18,0:16:43.26:0,43,607	0/0:8,0:7:19.62:0,20,344	0/1:7,0:7:4.67:5,0,169	0/1:7,0:7:2.45:2,0,133	0/0:3,0:3:8.94:0,9,97	0/0:6,0:6:9.01:0,9,137	0/0:8,0:8:12.53:0,13,184	0/0:30,0:29:26.25:0,26,708	0/0:15,0:15:27.23:0,27,501	1/1:12,5:15:44.90:528,45,0	1/1:5,3:8:17.91:185,18,0	0/1:8,1:9:1.41:120,0,1	0/0:1,0:1:3.01:0,3,56	0/0:10,0:10:18.71:0,19,367	0/0:10,0:9:26.18:0,26,387	0/0:11,0:11:9.26:0,9,287	1/1:3,9:12:23.71:314,24,0	1/1:7,1:7:11.53:112,12,0	1/1:0,4:4:9.03:146,9,0
chr10	86341120	.	TTA	T	1644.28	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=3.955;DP=332;FS=13.950;HRun=0;HaplotypeScore=48.3769;InbreedingCoeff=0.4543;MQ=56.22;MQ0=10;MQRankSum=-6.474;QD=10.15;ReadPosRankSum=-5.322;VQSLOD=0.7891;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:5.31:5,0,175	0/0:7,0:7:21.05:0,21,287	0/0:19,0:4:2.54:0,3,10	0/1:24,0:7:7.27:7,0,47	0/0:14,0:13:12.78:0,13,302	0/1:6,0:6:0.80:1,0,131	0/0:9,0:9:2.57:0,3,176	1/1:30,1:31:69.63:576,70,0	0/0:10,0:10:14.44:0,14,245	0/0:17,0:15:20.33:0,20,448	0/0:8,0:7:17.54:0,18,266	0/1:6,0:6:5.48:5,0,118	0/1:7,0:7:3.89:4,0,105	0/0:3,0:3:8.53:0,9,71	0/0:6,0:6:9.01:0,9,112	0/1:8,0:8:17.73:18,0,109	0/0:29,0:28:10.40:0,10,503	0/0:14,1:15:23.19:0,23,387	1/1:15,2:15:45.05:460,45,0	1/1:3,5:8:17.97:192,18,0	1/1:8,0:8:5.05:121,5,0	0/0:2,0:2:3.01:0,3,44	0/0:10,0:10:4.49:0,4,259	0/0:10,0:9:21.95:0,22,293	0/0:11,0:11:4.43:0,4,220	1/1:12,0:12:23.68:230,24,0	1/1:7,1:7:11.66:107,12,0	1/1:5,0:4:9.02:96,9,0
chr10	86341136	.	TTC	T	269.07	PASS	AB=0.962;AC=15;AF=0.278;AN=54;BaseQRankSum=5.892;DP=341;FS=8.930;HRun=0;HaplotypeScore=52.1284;InbreedingCoeff=-0.2989;MQ=48.67;MQ0=28;MQRankSum=-4.773;QD=1.56;ReadPosRankSum=0.834;VQSLOD=0.2926;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:21:12.82:0,13,226	0/0:8,0:7:13.79:0,14,122	1/1:16,0:3:1.50:4,1,0	0/0:23,0:6:9.21:0,9,41	0/0:14,0:13:26.31:0,26,277	0/0:7,0:7:20.38:0,20,135	0/1:11,0:10:26.49:26,0,87	0/1:23,0:22:34.13:34,0,176	0/0:9,0:9:23.75:0,24,183	0/0:17,0:16:18.90:0,19,237	0/0:13,0:12:1.43:0,1,184	0/1:6,0:5:14.82:15,0,49	0/1:4,3:7:58.06:58,0,64	0/1:6,0:6:16.50:16,0,72	0/1:7,0:6:8.16:8,0,56	0/0:8,0:7:16.73:0,17,121	0/1:31,0:26:63.71:64,0,218	0/0:15,0:13:35.55:0,36,339	0/1:16,1:14:52.35:52,0,113	0/1:9,0:9:15.05:15,0,60	0/0:9,0:6:1.87:0,2,38	./.	0/0:11,0:11:8.64:0,9,189	0/0:9,0:8:19.96:0,20,170	0/1:11,2:12:55.92:56,0,87	0/1:13,0:12:44.43:44,0,57	0/1:10,0:9:11.39:11,0,24	0/1:4,0:3:9.04:9,0,35
chr10	86341693	.	GA	G	1041.01	PASS	AC=22;AF=0.407;AN=54;BaseQRankSum=1.619;DP=150;FS=3.605;HRun=1;HaplotypeScore=20.4873;InbreedingCoeff=0.8119;MQ=90.99;MQ0=0;MQRankSum=-1.921;QD=24.21;ReadPosRankSum=-1.524;VQSLOD=3.0439;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:12.04:167,12,0	./.	0/0:7,0:7:13.91:0,14,165	0/0:11,0:11:13.10:0,13,240	0/0:5,0:5:15.05:0,15,234	0/0:8,0:8:23.97:0,24,275	0/0:8,0:8:24.07:0,24,350	1/1:0,7:7:21.03:238,21,0	0/0:4,0:4:9.03:0,9,126	1/1:0,1:1:3.01:42,3,0	1/1:3,2:5:11.97:111,12,0	0/0:6,0:6:18.03:0,18,237	0/0:5,0:5:15.05:0,15,234	0/0:10,0:10:30.07:0,30,413	0/0:9,0:9:27.09:0,27,411	0/0:2,0:2:6.02:0,6,94	1/1:0,4:4:6.02:82,6,0	0/0:5,0:5:15.03:0,15,210	1/1:0,2:2:6.02:83,6,0	1/1:0,3:3:9.03:126,9,0	1/1:2,0:2:5.98:47,6,0	0/0:9,0:9:24.54:0,25,345	0/0:8,0:8:24.01:0,24,283	0/0:5,0:5:12.04:0,12,188	0/0:3,0:3:9.03:0,9,141	1/1:2,0:2:6.01:68,6,0	1/1:0,8:8:18.06:249,18,0	1/1:1,0:1:2.99:24,3,0
chr10	86342013	.	TCA	T	2455.03	PASS	AB=0.931;AC=16;AF=0.320;AN=50;BaseQRankSum=7.009;DP=325;FS=3.680;HRun=0;HaplotypeScore=53.5127;InbreedingCoeff=0.7559;MQ=69.14;MQ0=7;MQRankSum=-2.076;QD=16.26;ReadPosRankSum=-1.708;VQSLOD=2.9156;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,10:22:33.06:386,33,0	./.	0/1:35,1:15:12.61:13,0,274	0/0:31,0:15:11.50:0,11,144	0/0:5,0:4:12.04:0,12,195	0/0:11,0:11:24.08:0,24,382	0/0:11,0:11:27.07:0,27,436	1/1:4,21:26:56.99:660,57,0	0/0:11,0:11:24.08:0,24,389	0/0:0,0:2:6:0,6,53	./.	0/0:12,0:12:30.10:0,30,481	0/1:7,1:8:21.59:22,0,180	0/0:14,0:14:39.13:0,39,630	0/0:11,0:11:26.68:0,27,434	0/0:13,0:13:36.12:0,36,584	0/0:5,0:14:27.01:0,27,260	0/0:15,0:15:38.16:0,38,588	1/1:5,6:11:18.06:219,18,0	./.	1/1:9,11:20:28.58:430,29,0	0/0:2,0:2:3.01:0,3,49	0/0:6,0:6:15.05:0,15,243	0/0:9,0:9:21.07:0,21,340	0/0:5,0:5:15.05:0,15,243	1/1:1,7:8:24.08:293,24,0	1/1:4,7:11:27.08:328,27,0	1/1:2,7:9:24.08:293,24,0
chr10	86342047	.	AAATAAT	A	393.60	PASS	AC=2;AF=0.043;AN=46;BaseQRankSum=1.480;DP=272;FS=0.000;HRun=0;HaplotypeScore=70.5087;InbreedingCoeff=0.3745;MQ=57.45;MQ0=2;MQRankSum=-3.627;QD=18.74;ReadPosRankSum=-1.061;VQSLOD=2.5523;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,11:21:23.75:484,24,0	0/0:3,0:3:9.03:0,9,165	./.	./.	0/0:7,0:7:12.51:0,13,342	0/0:3,0:13:21.07:0,21,542	0/0:8,0:8:6.02:0,6,92	0/0:24,0:24:21.07:0,21,461	0/0:4,0:4:3.01:0,3,98	0/0:7,0:7:12.04:0,12,270	./.	./.	0/0:6,0:6:9.03:0,9,232	0/0:11,0:11:12.04:0,12,327	0/0:5,0:5:3.01:0,3,98	0/0:10,0:11:11.97:0,12,313	0/0:16,0:17:27.09:0,27,513	0/0:19,0:19:39.13:0,39,1273	0/0:10,0:10:13.28:0,13,232	./.	0/0:8,0:7:3.01:0,3,52	0/0:4,0:4:6.02:0,6,196	0/0:3,0:3:3.01:0,3,98	0/0:7,0:7:12.04:0,12,365	0/0:6,0:6:12.02:0,12,319	0/0:6,0:9:9.03:0,9,223	0/0:4,0:8:12.04:0,12,302	0/0:11,0:12:15.05:0,15,370
chr10	86342244	.	C	CA	1512.92	PASS	AB=0.881;AC=14;AF=0.250;AN=56;BaseQRankSum=-7.305;DP=396;FS=1.095;HRun=11;HaplotypeScore=45.1008;InbreedingCoeff=0.5490;MQ=77.25;MQ0=1;MQRankSum=-0.902;QD=12.30;ReadPosRankSum=1.241;VQSLOD=2.9561;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,27:39:32.24:826,32,0	1/1:0,4:4:9.02:91,9,0	0/0:13,0:14:10.94:0,11,72	0/0:14,0:13:5.27:0,5,46	0/0:13,1:13:8.41:0,8,248	0/0:19,0:21:54.88:0,55,407	0/0:15,0:15:5.40:0,5,225	0/0:25,0:26:51.86:0,52,383	0/1:7,0:9:5.64:6,0,86	1/1:3,8:11:21.04:213,21,0	1/1:0,5:5:12.02:122,12,0	0/0:11,0:12:34.90:0,35,259	0/0:5,0:5:8.96:0,9,70	0/0:11,0:12:28.90:0,29,215	0/0:9,0:9:17.88:0,18,139	0/0:7,0:7:14.91:0,15,112	1/1:3,14:17:18.85:373,19,0	0/1:18,2:20:5.05:5,0,321	0/0:19,0:20:37.86:0,38,284	0/0:11,0:12:21.19:0,21,165	0/1:10,3:12:30.99:31,0,156	0/1:3,1:4:21.47:21,0,37	0/0:8,0:8:20.91:0,21,163	0/0:22,1:24:28.36:0,28,393	0/0:10,0:10:20.91:0,21,162	0/0:12,1:14:4.45:0,4,208	0/0:18,0:18:39.58:0,40,303	0/0:15,0:16:37.87:0,38,284
chr10	86342334	.	GA	G	644.54	PASS	AB=0.970;AC=9;AF=0.161;AN=56;BaseQRankSum=7.981;DP=448;FS=13.156;HRun=12;HaplotypeScore=64.4028;InbreedingCoeff=0.2811;MQ=58.83;MQ0=7;MQRankSum=-2.876;QD=4.57;ReadPosRankSum=1.373;VQSLOD=0.4522;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:34:92.64:720,93,0	0/0:3,0:5:8.67:0,9,52	0/1:19,1:7:9.18:17,0,9	0/0:22,0:8:8.69:0,9,68	0/0:16,1:17:15.82:0,16,334	0/0:21,1:22:33.87:0,34,517	0/0:14,2:17:15.66:0,16,320	0/0:16,0:15:1.33:0,1,91	0/0:23,0:23:53.90:0,54,530	0/0:4,0:16:36.61:0,37,218	0/0:2,0:5:5.68:0,6,28	0/0:26,1:26:39.89:0,40,585	0/0:1,0:1:3:0,3,25	0/0:13,1:16:21.67:0,22,366	0/0:9,0:9:21.03:0,21,208	0/0:11,0:11:21.03:0,21,207	0/0:2,0:20:26.39:0,26,222	0/0:19,1:19:24.86:0,25,434	0/1:19,0:19:7.61:8,0,53	0/0:6,0:6:1.85:0,2,48	0/0:11,0:9:9.43:0,9,80	0/1:8,1:9:5.20:5,0,134	0/0:6,1:8:14.72:0,15,115	0/0:22,2:26:31.35:0,31,652	0/0:9,0:9:24.05:0,24,243	0/1:23,0:23:2.34:2,0,81	0/1:21,0:21:2.58:3,0,99	1/1:15,0:15:7.72:18,8,0
chr10	86342341	.	AAAAAAG	A	2823.76	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=4.761;DP=461;FS=0.508;HRun=0;HaplotypeScore=99.0782;InbreedingCoeff=0.9348;MQ=59.76;MQ0=5;MQRankSum=-5.084;QD=23.34;ReadPosRankSum=-1.858;VQSLOD=2.9564;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.31:0,96,1927	0/0:5,0:5:9.01:0,9,200	0/0:16,0:8:14.21:0,14,220	0/0:17,0:5:9.03:0,9,267	0/0:17,0:17:39.61:0,40,1139	0/0:20,0:20:54.19:0,54,1624	0/0:18,0:18:39.12:0,39,1011	1/1:6,12:17:31.28:460,31,0	0/0:22,0:22:42.13:0,42,1203	0/0:16,0:16:39.13:0,39,1063	0/0:6,0:6:15.04:0,15,256	0/0:27,0:26:69.24:0,69,1974	0/0:2,0:2:6.02:0,6,145	0/0:17,0:17:45.15:0,45,1254	0/0:10,0:10:27.08:0,27,721	0/0:10,0:10:27.08:0,27,779	0/0:25,0:25:57.18:0,57,1250	0/0:19,0:18:45.15:0,45,1227	1/1:5,15:20:42.11:704,42,0	1/1:2,3:5:9:141,9,0	1/1:13,1:13:14.85:160,15,0	0/0:11,0:11:24.08:0,24,649	0/0:8,0:8:21.07:0,21,581	0/0:28,0:28:81.22:0,81,2143	0/0:10,0:10:21.06:0,21,593	1/1:4,18:22:56.48:831,56,0	1/1:6,19:25:21.35:420,21,0	1/1:7,10:17:15.05:300,15,0
chr10	86342831	.	T	TG	306.40	PASS	AB=1.000;AC=15;AF=0.417;AN=36;BaseQRankSum=-1.749;DP=83;FS=5.969;HRun=5;HaplotypeScore=15.7342;InbreedingCoeff=0.4436;MQ=78.68;MQ0=5;MQRankSum=0.509;QD=12.26;ReadPosRankSum=-0.642;VQSLOD=0.1852;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,5:9:12.04:147,12,0	./.	0/0:15,0:6:13.68:0,14,92	0/0:22,0:7:8.94:0,9,64	0/1:3,0:3:0:0,0,0	./.	0/0:1,0:1:3.01:0,3,34	1/1:2,0:2:6.01:54,6,0	./.	0/0:4,0:3:3.01:0,3,34	0/0:1,0:1:2.99:0,3,24	./.	1/1:1,0:1:2.99:24,3,0	./.	./.	./.	0/0:3,0:3:3.01:0,3,34	./.	0/0:3,0:1:2.99:0,3,24	1/1:1,0:1:3.01:40,3,0	1/1:2,2:4:3.01:40,3,0	./.	0/0:1,0:1:3.01:0,3,34	0/0:1,0:1:3.01:0,3,34	0/0:4,0:4:3.01:0,3,34	1/1:2,2:4:6.02:81,6,0	1/1:1,0:1:3.01:40,3,0	./.
chr10	86343442	.	GTTTCTTT	G	2986.36	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=2.752;DP=395;FS=4.306;HRun=0;HaplotypeScore=86.1144;InbreedingCoeff=0.7075;MQ=62.55;MQ0=9;MQRankSum=1.447;QD=15.64;ReadPosRankSum=1.713;VQSLOD=2.2297;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:17:6.25:84,0,6	0/0:3,0:3:5.33:0,5,27	0/0:27,0:12:25.32:0,25,205	0/0:37,0:13:16.39:0,16,213	0/0:24,0:24:42.83:0,43,1347	0/0:8,0:8:12.03:0,12,252	0/0:12,0:11:27.09:0,27,651	1/1:9,8:16:24.01:362,24,0	0/0:12,0:12:30.08:0,30,814	0/1:17,0:16:23.85:27,0,24	1/1:15,0:15:15.59:124,16,0	0/0:7,0:7:18.06:0,18,537	0/0:9,0:10:20.80:0,21,568	0/0:10,0:10:21.06:0,21,562	0/0:6,0:6:12.04:0,12,338	0/0:9,0:9:21.05:0,21,420	1/1:14,0:14:2.60:113,3,0	0/1:17,0:17:58.30:58,0,71	1/1:8,7:12:17.99:217,18,0	1/1:4,19:23:54.18:980,54,0	1/1:14,0:14:15.05:289,15,0	0/0:4,0:4:9.03:0,9,273	0/0:6,0:6:15.03:0,15,361	0/0:12,0:11:27.08:0,27,604	0/0:17,0:17:39.13:0,39,936	1/1:4,7:10:15.05:232,15,0	1/1:19,0:19:15.05:295,15,0	1/1:9,0:9:21.07:409,21,0
chr10	86343446	.	C	CT	3755.73	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=1.354;DP=415;FS=0.522;HRun=6;HaplotypeScore=67.5762;InbreedingCoeff=0.9506;MQ=60.46;MQ0=11;MQRankSum=0.292;QD=19.26;ReadPosRankSum=0.214;VQSLOD=3.1610;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,12:20:25.79:306,26,0	1/1:2,3:4:6.02:67,6,0	0/0:29,0:12:28.47:0,28,218	0/0:38,0:14:13.98:0,14,128	0/0:24,0:24:51.99:0,52,520	0/0:10,0:10:11.96:0,12,123	0/0:14,0:12:26.61:0,27,250	1/1:14,0:13:19.41:222,19,0	0/0:14,0:14:26.63:0,27,282	1/1:6,14:19:42.08:500,42,0	1/1:5,9:14:33.08:386,33,0	0/0:7,0:7:15.55:0,16,153	0/0:13,0:13:17.12:0,17,182	0/0:11,0:11:20.71:0,21,213	0/0:8,0:8:12.02:0,12,121	0/0:9,0:9:21.03:0,21,206	1/1:9,8:16:30.90:357,31,0	1/1:2,15:17:24.55:300,25,0	1/1:10,0:8:14.17:154,14,0	1/1:20,0:20:52.04:596,52,0	1/1:2,10:12:15.05:187,15,0	0/0:3,0:3:9.02:0,9,92	0/0:7,0:7:18.03:0,18,177	0/0:14,0:13:26.05:0,26,250	0/0:17,0:17:27.82:0,28,312	1/1:9,0:8:14.73:184,15,0	1/1:7,14:20:22.29:236,22,0	1/1:10,1:11:21.95:260,22,0
chr10	86344172	.	T	TA	4921.74	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-10.166;DP=580;FS=0.362;HRun=6;HaplotypeScore=55.0744;InbreedingCoeff=0.9877;MQ=66.12;MQ0=0;MQRankSum=-2.325;QD=32.59;ReadPosRankSum=-0.452;VQSLOD=4.7330;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,105,1053	0/0:10,0:10:26.09:0,26,251	0/0:9,0:9:20.40:0,20,185	0/0:6,0:6:9.01:0,9,87	0/0:42,0:42:99:0,105,1053	0/0:26,0:26:66.11:0,66,660	0/0:17,0:17:48.06:0,48,468	1/1:2,21:23:57.13:665,57,0	0/0:18,0:18:39.04:0,39,384	0/0:26,0:26:66.11:0,66,661	0/0:26,0:26:69.15:0,69,704	0/0:15,0:15:42.10:0,42,428	0/0:14,0:14:39.06:0,39,389	0/0:19,0:19:39.06:0,39,389	0/0:15,0:15:36.05:0,36,354	0/0:8,0:8:24.05:0,24,245	0/0:37,0:37:99:0,105,1053	0/0:21,0:21:57.03:0,57,553	1/1:3,17:20:51.12:615,51,0	1/1:3,26:29:75.20:928,75,0	1/1:0,17:17:48.15:605,48,0	0/0:18,0:18:48.11:0,48,489	0/0:13,0:13:36.08:0,36,367	0/0:24,0:24:63.14:0,63,642	0/0:25,0:25:75.16:0,75,758	1/1:2,32:34:68.66:1137,69,0	1/1:1,18:19:51.15:631,51,0	1/1:0,9:9:27.09:340,27,0
chr10	86344287	.	C	CAAA	3971.69	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=-3.770;DP=558;FS=11.749;HRun=10;HaplotypeScore=89.2454;InbreedingCoeff=0.8405;MQ=60.93;MQ0=4;MQRankSum=-0.409;QD=21.35;ReadPosRankSum=-4.241;VQSLOD=0.0200;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:38:62.15:0,62,400	0/0:13,0:13:33.08:0,33,379	0/1:18,0:15:17.96:18,0,157	0/0:15,0:10:17.30:0,17,163	0/0:22,0:22:60.36:0,60,693	0/0:22,0:21:43.73:0,44,539	0/0:21,0:21:48.01:0,48,568	1/1:7,13:24:46.15:528,46,0	0/0:18,0:18:27.71:0,28,510	0/0:26,0:26:66.10:0,66,736	0/0:16,0:16:42.09:0,42,478	0/0:15,0:15:34.40:0,34,428	0/1:10,0:10:4.68:5,0,166	0/0:19,0:19:57.11:0,57,667	0/0:16,0:16:45.12:0,45,529	0/0:17,0:17:37.79:0,38,459	0/0:38,0:38:93.01:0,93,1070	1/1:5,1:15:22.06:188,22,0	1/1:13,5:20:45.04:666,45,0	1/1:7,7:16:42.03:621,42,0	1/1:2,9:13:11.68:230,12,0	0/0:8,0:9:23.92:0,24,243	0/0:15,0:15:36.09:0,36,426	0/0:37,0:38:83.71:0,84,1011	0/0:13,0:13:30.06:0,30,334	1/1:5,24:32:52.18:1148,52,0	1/1:4,10:17:28.26:414,28,0	1/1:7,9:16:9.70:155,10,0
chr10	86344483	.	TA	T	486.94	PASS	AB=0.909;AC=3;AF=0.054;AN=56;BaseQRankSum=4.859;DP=487;FS=10.762;HRun=12;HaplotypeScore=72.3587;InbreedingCoeff=0.6671;MQ=69.33;MQ0=0;MQRankSum=-2.253;QD=10.36;ReadPosRankSum=1.516;VQSLOD=2.0840;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,27:37:58.37:581,58,0	0/0:5,0:5:12.02:0,12,122	0/0:21,0:12:17.41:0,17,144	0/0:24,0:15:20.31:0,20,142	0/0:22,0:22:60.12:0,60,609	0/0:16,0:16:36.07:0,36,365	0/0:15,0:17:44.76:0,45,424	0/0:20,0:20:44.65:0,45,320	0/1:9,1:10:2.22:2,0,149	0/0:24,0:24:54.10:0,54,545	0/0:24,0:24:66.12:0,66,666	0/0:14,0:15:32.86:0,33,307	0/0:10,0:10:30.06:0,30,304	0/0:8,0:9:23.83:0,24,211	0/0:16,0:16:35.98:0,36,345	0/0:14,0:14:36.07:0,36,365	0/0:34,3:37:29.60:0,30,812	0/0:23,0:23:54.05:0,54,529	0/0:26,1:27:48.22:0,48,460	0/0:11,0:13:35.49:0,35,256	0/0:16,0:16:41.75:0,42,316	0/0:6,0:6:12.02:0,12,122	0/0:6,0:6:15.03:0,15,152	0/0:11,0:11:30.04:0,30,297	0/0:15,0:15:42.03:0,42,409	0/0:25,0:25:50.56:0,51,358	0/0:18,0:18:44.92:0,45,374	0/0:6,0:6:8.96:0,9,69
chr10	86344710	.	GA	G	1286.47	PASS	AB=0.909;AC=25;AF=0.446;AN=56;BaseQRankSum=7.170;DP=404;FS=2.999;HRun=12;HaplotypeScore=53.2040;InbreedingCoeff=0.5909;MQ=60.74;MQ0=30;MQRankSum=0.907;QD=5.38;ReadPosRankSum=1.402;VQSLOD=1.4886;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:20:3.46:108,0,3	1/1:0,5:5:14.94:115,15,0	0/1:24,0:7:0.10:0,0,42	0/0:14,0:5:7.78:0,8,45	0/0:23,0:22:41.33:0,41,378	0/0:16,0:16:36.05:0,36,350	0/0:9,0:8:15.03:0,15,150	1/1:22,0:18:14.32:58,14,0	0/0:9,0:8:18.04:0,18,182	1/1:2,11:13:29.87:231,30,0	1/1:4,12:18:36.93:266,37,0	0/0:9,0:8:14.99:0,15,141	0/0:7,0:7:15.02:0,15,146	0/1:13,0:12:26.47:26,0,103	0/0:10,1:11:6.79:0,7,239	0/0:13,0:13:36.01:0,36,349	0/1:8,20:26:16.12:257,0,16	0/0:17,0:19:18.97:0,19,103	1/1:18,0:17:2.75:50,3,0	1/1:9,0:8:6.41:37,6,0	1/1:14,0:12:13.02:53,13,0	0/0:1,0:1:3.01:0,3,30	0/0:4,0:4:9:0,9,85	0/1:6,0:4:11.16:11,0,73	0/0:25,1:27:25.42:0,25,562	1/1:23,0:22:28.12:110,28,0	1/1:8,0:9:16.72:64,17,0	1/1:10,0:10:21.45:99,21,0
chr10	86345881	.	ATTAT	A	2940.78	PASS	AB=0.875;AC=16;AF=0.308;AN=52;BaseQRankSum=9.471;DP=366;FS=4.436;HRun=0;HaplotypeScore=56.2052;InbreedingCoeff=0.6944;MQ=59.20;MQ0=1;MQRankSum=-1.585;QD=19.35;ReadPosRankSum=-2.208;VQSLOD=2.6162;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:36.12:0,36,840	0/0:11,0:11:24.08:0,24,567	./.	0/0:6,0:5:9.03:0,9,175	0/0:13,0:13:24.08:0,24,550	0/0:18,0:18:45.15:0,45,1090	0/0:6,0:6:9.03:0,9,218	1/1:15,15:28:39.12:561,39,0	0/1:6,1:7:42.62:43,0,60	0/0:19,0:19:21.07:0,21,506	0/0:8,0:8:15.04:0,15,310	0/0:9,0:9:12.03:0,12,243	0/0:7,0:7:6.02:0,6,145	0/1:6,1:7:33.61:34,0,199	0/0:11,0:11:15.05:0,15,328	0/0:4,0:4:3.01:0,3,65	0/0:24,0:24:60.18:0,60,1397	0/0:19,0:19:15.05:0,15,363	1/1:11,10:20:30.10:474,30,0	1/1:7,6:13:15.05:243,15,0	1/1:2,7:9:18.06:292,18,0	0/0:6,0:6:6.02:0,6,145	0/0:6,0:6:3.01:0,3,73	./.	0/0:11,0:11:24.08:0,24,571	1/1:10,12:22:33.10:510,33,0	1/1:5,21:26:45.15:729,45,0	1/1:12,5:16:15.05:243,15,0
chr10	86347180	.	CGTGTGTGTGTGTGT	C	166.86	PASS	AB=0.609;AC=1;AF=0.019;AN=52;BaseQRankSum=2.095;DP=573;FS=9.987;HRun=0;HaplotypeScore=195.3820;InbreedingCoeff=0.0988;MQ=59.72;MQ0=23;MQRankSum=-1.816;QD=5.96;ReadPosRankSum=0.148;VQSLOD=1.8594;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:32:18.06:0,18,720	0/0:4,0:3:9.03:0,9,398	./.	./.	0/0:11,0:12:12.97:0,13,520	0/0:14,0:13:30.09:0,30,1089	0/0:30,0:39:31.64:0,32,1302	0/0:17,0:17:18.06:0,18,478	0/0:16,0:19:30.57:0,31,1342	0/0:12,0:12:18.06:0,18,605	0/0:10,0:10:15.05:0,15,523	0/0:17,0:18:30.10:0,30,1347	0/0:9,0:9:12.51:0,13,452	0/0:12,0:12:9.50:0,10,316	0/0:16,0:16:18.53:0,19,910	0/0:15,0:15:24.55:0,25,1162	0/0:37,0:37:66.20:0,66,2857	0/1:10,17:28:8.50:241,0,8	0/0:22,0:21:16.72:0,17,347	0/0:13,0:12:15.78:0,16,270	0/0:29,0:28:6.02:0,6,155	0/0:12,0:11:11.13:0,11,563	0/0:11,0:11:18.06:0,18,881	0/0:21,0:29:33.11:0,33,1431	0/0:19,0:17:33.11:0,33,1450	0/0:30,0:30:54.55:0,55,2067	0/0:17,0:19:33.01:0,33,1323	0/0:11,0:10:18.53:0,19,499
chr10	86347228	.	T	TGCGCGCGC	4039.81	PASS	AB=0.883;AC=17;AF=0.315;AN=54;BaseQRankSum=-0.608;DP=517;FS=4.033;HRun=0;HaplotypeScore=130.3946;InbreedingCoeff=0.6924;MQ=56.09;MQ0=14;MQRankSum=-1.429;QD=20.61;ReadPosRankSum=-2.348;VQSLOD=2.8139;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:9,0:8:32.54:33,0,46	0/0:18,0:10:27.06:0,27,550	0/0:10,0:9:21.03:0,21,454	0/0:11,0:11:21.05:0,21,486	0/0:20,0:19:51.15:0,51,1075	0/0:33,0:33:60.19:0,60,1471	1/1:18,0:17:18.94:368,19,0	0/0:22,0:20:42:0,42,1078	0/0:7,0:6:7.41:0,7,43	1/1:7,0:7:0.24:13,0,0	0/0:19,0:19:43.37:0,43,1148	0/0:10,0:9:9.02:0,9,239	0/0:18,0:18:30.57:0,31,766	0/0:7,0:7:18.06:0,18,481	0/0:15,0:15:18.06:0,18,431	0/1:43,0:42:99:283,0,128	0/0:33,0:33:48.16:0,48,1220	1/1:7,10:19:39.09:807,39,0	1/1:9,4:12:2.89:45,3,0	0/1:11,9:24:0:0,0,0	0/0:10,0:9:21.07:0,21,484	0/0:11,0:11:18.05:0,18,426	0/0:26,0:25:42.13:0,42,1001	0/0:12,0:11:18.84:0,19,374	1/1:13,17:30:57.45:1377,57,0	1/1:17,4:21:38.43:775,38,0	1/1:11,0:11:20.37:338,20,0
chr10	86347722	.	TGAG	T	1721.45	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.146;DP=654;FS=2.965;HRun=0;HaplotypeScore=94.6951;InbreedingCoeff=0.9879;MQ=89.52;MQ0=0;MQRankSum=-4.849;QD=31.30;ReadPosRankSum=3.144;VQSLOD=4.0041;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,55:55:99:1816,117,0	0/0:6,0:6:18.06:0,18,408	0/0:31,0:31:84.20:0,84,1631	0/0:28,0:28:74.70:0,75,1459	0/0:21,0:21:63.14:0,63,1250	0/0:32,0:32:90.31:0,90,2039	0/0:27,0:27:78.23:0,78,1679	0/0:30,0:30:84.19:0,84,1757	0/0:23,0:23:63.20:0,63,1385	0/0:27,0:27:75.25:0,75,1598	0/0:19,0:19:48.15:0,48,1045	0/0:24,0:24:66.20:0,66,1449	0/0:15,0:15:42.14:0,42,949	0/0:16,0:16:42.10:0,42,904	0/0:25,0:25:75.21:0,75,1567	0/0:17,0:17:51.10:0,51,1022	0/0:32,0:32:96.29:0,96,2087	0/0:14,0:14:38.90:0,39,782	0/0:24,0:24:71.90:0,72,1530	0/0:22,0:22:63.20:0,63,1363	0/0:35,0:35:99:0,102,2302	0/0:23,0:23:66.22:0,66,1441	0/0:16,0:16:39.12:0,39,840	0/0:23,0:23:63.20:0,63,1370	0/0:14,0:14:39.11:0,39,798	0/0:26,0:26:72.24:0,72,1591	0/0:21,0:21:63.19:0,63,1374	0/0:8,0:8:21.07:0,21,476
chr10	86349180	.	T	TA	3617.65	PASS	AB=0.803;AC=23;AF=0.411;AN=56;BaseQRankSum=-7.510;DP=714;FS=13.299;HRun=14;HaplotypeScore=85.8381;InbreedingCoeff=0.5913;MQ=67.19;MQ0=0;MQRankSum=1.425;QD=9.70;ReadPosRankSum=-1.444;VQSLOD=1.1777;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,5:32:18.93:0,19,243	1/1:1,10:11:4.77:166,5,0	0/0:18,0:16:9.71:0,10,85	0/1:12,0:6:10.19:10,0,24	0/0:28,1:34:45.69:0,46,383	0/0:30,2:32:41.37:0,41,388	0/1:16,1:19:6.45:6,0,156	1/1:11,18:29:1.35:344,1,0	0/0:15,2:18:2.66:0,3,175	1/1:14,22:37:56.97:496,57,0	1/1:15,10:25:7.46:156,7,0	0/0:28,0:29:48.99:0,49,321	0/0:15,0:17:27.57:0,28,165	0/0:20,0:20:30.61:0,31,208	0/1:21,2:24:32.21:32,0,144	0/0:13,0:13:32.50:0,32,210	1/1:10,21:31:26.20:351,26,0	0/0:4,0:16:26.45:0,26,76	1/1:9,12:24:19.95:300,20,0	0/1:5,13:20:6.23:155,0,6	1/1:11,27:38:30.62:379,31,0	0/0:22,1:24:22.87:0,23,268	0/0:32,0:31:26.32:0,26,295	0/0:34,0:33:73.62:0,74,476	0/0:18,2:21:16.82:0,17,221	1/1:8,20:30:34.37:393,34,0	1/1:11,30:42:22.38:499,22,0	0/1:7,21:29:2.94:330,0,3
chr10	86349370	.	G	GACAC	1846.87	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-4.487;DP=908;FS=5.184;HRun=0;HaplotypeScore=142.6123;InbreedingCoeff=0.7672;MQ=60.63;MQ0=5;MQRankSum=-2.138;QD=17.42;ReadPosRankSum=1.349;VQSLOD=3.0158;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,43:54:80.74:1941,81,0	0/0:8,0:8:24.07:0,24,383	0/0:54,0:33:15.15:0,15,475	0/1:51,0:35:0.61:1,0,483	0/0:32,0:32:66.12:0,66,1267	0/0:22,0:22:51.12:0,51,805	0/0:29,0:29:66.21:0,66,1084	0/0:44,0:44:90.25:0,90,1339	0/0:27,0:27:69.21:0,69,1098	0/0:40,0:39:99:0,99,1599	0/0:23,0:23:51.17:0,51,820	0/0:37,0:37:99:0,99,1613	0/0:28,0:28:81.19:0,81,1236	0/0:25,0:26:72.20:0,72,1114	0/0:31,0:31:84.22:0,84,1295	0/0:28,0:28:78.20:0,78,1254	0/0:28,0:28:69.17:0,69,1110	0/0:30,0:30:48.89:0,49,1142	0/0:24,0:23:39.97:0,40,600	0/0:34,0:34:93.30:0,93,1542	0/0:63,0:64:99:0,168,2627	0/0:25,0:26:75.22:0,75,1170	0/0:25,0:25:54.17:0,54,888	0/0:36,0:36:81.05:0,81,1408	0/0:27,0:27:69.23:0,69,1141	0/0:35,0:35:90.27:0,90,1431	0/0:33,0:33:84.27:0,84,1349	0/0:10,0:10:27.06:0,27,406
chr10	86349974	.	CA	C	1315.30	PASS	AB=0.791;AC=16;AF=0.286;AN=56;BaseQRankSum=4.697;DP=528;FS=4.005;HRun=14;HaplotypeScore=59.5435;InbreedingCoeff=0.4405;MQ=60.01;MQ0=9;MQRankSum=-0.407;QD=6.20;ReadPosRankSum=-0.244;VQSLOD=2.2897;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,2:42:54.18:0,54,780	0/0:10,1:11:3.43:0,3,171	0/0:6,0:2:2.22:0,2,7	0/0:11,0:10:9.99:0,10,51	0/0:20,2:23:0.65:0,1,261	0/0:16,0:16:32.85:0,33,286	0/0:13,1:14:3.38:0,3,160	1/1:12,12:22:32.30:226,32,0	0/0:11,1:11:3.90:0,4,169	0/1:22,5:27:58.10:58,0,182	0/0:17,0:17:48.01:0,48,436	0/0:16,0:15:11.99:0,12,104	0/0:10,0:8:9.01:0,9,84	0/0:23,0:23:36.36:0,36,322	0/0:14,1:15:4.72:0,5,199	0/0:14,0:14:3.64:0,4,175	0/1:25,5:30:30.07:30,0,304	0/0:22,2:24:22.12:0,22,464	0/1:7,12:19:5.68:166,0,6	1/1:6,13:20:31.71:211,32,0	1/1:5,10:13:23.78:164,24,0	0/1:13,3:17:31.88:32,0,151	0/0:22,0:22:39.03:0,39,357	0/0:17,1:20:24.11:0,24,333	0/0:16,0:16:12.47:0,12,258	1/1:10,15:25:0.59:231,1,0	1/1:8,16:27:47.30:305,47,0	1/1:2,4:6:10.96:68,11,0
chr10	86350512	.	AC	A	2671.37	PASS	AB=0.870;AC=17;AF=0.304;AN=56;BaseQRankSum=4.800;DP=553;FS=0.387;HRun=10;HaplotypeScore=73.2441;InbreedingCoeff=0.8541;MQ=69.35;MQ0=2;MQRankSum=-0.226;QD=13.49;ReadPosRankSum=2.462;VQSLOD=3.8144;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:38:57.03:168,57,0	0/0:4,0:12:20.04:0,20,111	0/0:19,0:16:7.15:0,7,147	0/0:15,0:13:18.01:0,18,176	0/0:24,2:26:10.87:0,11,542	0/0:12,0:12:27.06:0,27,288	0/0:24,1:25:22.08:0,22,461	1/1:6,10:16:20.92:173,21,0	0/0:19,0:19:42.10:0,42,457	0/0:15,0:16:17.49:0,17,137	0/0:3,0:8:20.25:0,20,137	0/0:17,2:19:10.04:0,10,338	0/0:22,1:23:31.09:0,31,561	0/0:11,0:11:27.04:0,27,279	0/1:17,3:20:58.75:59,0,320	0/0:11,0:12:29.91:0,30,313	0/0:12,0:26:25.60:0,26,128	0/0:8,0:20:35.21:0,35,285	1/1:4,12:16:5.81:279,6,0	1/1:2,14:16:8.82:305,9,0	1/1:9,20:29:56.95:495,57,0	0/0:15,0:15:36.10:0,36,398	0/0:19,0:19:39.09:0,39,423	0/0:33,1:35:45.95:0,46,703	0/0:21,0:21:54.13:0,54,581	1/1:2,26:30:71.47:692,71,0	1/1:2,21:23:56.86:494,57,0	1/1:1,8:9:23.99:208,24,0
chr10	86351743	.	A	AC	1081.46	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.506;DP=513;FS=14.530;HRun=4;HaplotypeScore=53.6078;InbreedingCoeff=0.8937;MQ=74.70;MQ0=1;MQRankSum=-0.765;QD=25.15;ReadPosRankSum=2.559;VQSLOD=1.9402;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,39:43:87.29:1176,87,0	0/0:3,0:3:9.03:0,9,102	0/0:19,0:19:45.08:0,45,489	0/0:20,0:19:48:0,48,505	0/0:16,0:16:42.12:0,42,473	0/0:20,0:20:54.10:0,54,589	0/0:21,0:21:60.17:0,60,680	0/0:22,0:22:57.16:0,57,646	0/0:22,0:21:54.14:0,54,602	0/0:9,0:9:24.07:0,24,272	0/0:4,0:4:12.02:0,12,127	0/0:28,0:28:66.18:0,66,746	0/0:14,0:14:39.11:0,39,439	0/0:19,0:19:45.11:0,45,509	0/0:23,0:23:60.17:0,60,676	0/0:19,0:19:57.16:0,57,646	0/0:35,0:35:93.26:0,93,1054	0/0:22,0:22:66.19:0,66,748	0/0:13,0:13:30.05:0,30,327	0/0:10,0:10:30.09:0,30,340	0/0:54,0:53:99:0,147,1642	0/0:9,0:9:27.08:0,27,306	0/0:11,0:11:30.08:0,30,338	0/0:21,0:21:60.17:0,60,680	0/0:5,0:5:15.04:0,15,170	0/0:11,0:11:27.08:0,27,306	0/0:14,0:13:39.05:0,39,418	0/0:6,0:6:18.05:0,18,204
chr10	86352225	.	T	TTTTG	1326.52	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.859;DP=678;FS=2.917;HRun=0;HaplotypeScore=106.1558;InbreedingCoeff=0.7310;MQ=60.23;MQ0=3;MQRankSum=1.904;QD=34.91;ReadPosRankSum=1.663;VQSLOD=3.8625;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,27:37:43.76:1421,44,0	0/0:4,0:4:6.02:0,6,96	0/0:26,0:18:5.06:0,5,87	0/0:29,0:20:14.53:0,15,177	0/0:18,0:18:45.15:0,45,712	0/0:30,0:29:63.20:0,63,986	0/0:30,0:30:44.48:0,44,756	0/0:24,0:24:21.04:0,21,270	0/0:23,0:23:47.94:0,48,707	0/0:35,0:35:66.21:0,66,998	0/0:15,0:15:30.09:0,30,457	0/0:16,0:16:30.10:0,30,481	0/0:17,0:17:27.09:0,27,433	0/0:17,0:17:36.12:0,36,577	0/0:18,0:18:33.11:0,33,529	0/0:25,0:25:57.19:0,57,911	0/0:34,0:34:69.22:0,69,1079	0/0:46,0:46:96.23:0,96,1427	0/0:22,0:21:27.05:0,27,403	0/0:18,0:18:30.09:0,30,455	0/0:41,0:41:84.27:0,84,1302	0/0:24,0:24:48.13:0,48,721	0/0:22,0:22:39.10:0,39,559	0/0:31,0:31:75.24:0,75,1171	0/0:17,0:17:30.09:0,30,458	0/0:26,0:26:57.19:0,57,909	0/0:23,0:23:39.09:0,39,576	0/0:8,0:8:6.02:0,6,96
chr10	86353521	.	TTC	T	434.56	PASS	AB=1.000;AC=3;AF=0.056;AN=54;BaseQRankSum=3.060;DP=305;FS=5.060;HRun=0;HaplotypeScore=51.5161;InbreedingCoeff=0.4520;MQ=88.76;MQ0=6;MQRankSum=-2.362;QD=22.87;ReadPosRankSum=0.954;VQSLOD=3.6500;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:16:39.06:527,39,0	0/0:2,0:2:6.02:0,6,112	0/0:63,0:31:31.93:0,32,627	0/0:56,0:24:50.23:0,50,594	0/0:6,0:6:15.03:0,15,202	0/0:7,0:7:21.03:0,21,335	0/0:6,0:6:17.98:0,18,267	0/0:20,0:20:60.14:0,60,985	0/0:5,0:5:11.99:0,12,171	0/0:4,0:4:12.04:0,12,224	0/0:5,0:5:11.45:0,11,199	0/0:10,0:10:23.67:0,24,401	0/0:3,0:3:9.03:0,9,165	0/0:4,0:4:4.85:0,5,130	0/0:6,0:6:17.62:0,18,249	0/1:2,0:2:7.34:7,0,50	0/0:18,0:18:50.97:0,51,817	0/0:15,0:15:29.98:0,30,548	0/0:11,0:10:30.10:0,30,506	0/0:5,0:5:14.98:0,15,241	0/0:5,0:5:15.05:0,15,279	./.	0/0:5,0:5:12.03:0,12,195	0/0:11,0:11:27.56:0,28,500	0/0:3,0:3:9.02:0,9,140	0/0:6,0:6:15.04:0,15,250	0/0:6,0:6:18.06:0,18,318	0/0:3,0:3:9.01:0,9,135
chr10	86353549	.	G	GA	120.61	PASS	AB=1.000;AC=5;AF=0.100;AN=50;BaseQRankSum=3.075;DP=171;FS=4.845;HRun=1;HaplotypeScore=27.4749;InbreedingCoeff=0.2469;MQ=53.99;MQ0=20;MQRankSum=-1.554;QD=3.17;ReadPosRankSum=2.816;VQSLOD=-0.0410;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:29.77:0,30,270	./.	1/1:8,0:4:0.89:2,1,0	0/1:14,0:7:19.52:20,0,68	0/0:2,0:2:3.01:0,3,39	0/0:8,0:7:11.97:0,12,126	0/0:13,0:10:17.98:0,18,176	0/0:7,0:7:17.97:0,18,181	0/0:4,0:4:6.02:0,6,69	0/0:3,0:2:2.97:0,3,20	0/0:2,0:2:3.01:0,3,37	0/0:10,0:10:23.94:0,24,245	0/0:5,0:5:8.87:0,9,57	0/0:2,0:2:5.95:0,6,56	0/0:3,0:3:6:0,6,62	0/0:3,0:2:6.02:0,6,74	0/0:10,0:9:20.83:0,21,183	1/1:2,9:9:15.05:198,15,0	0/0:5,0:2:6.01:0,6,68	0/0:5,0:4:8.98:0,9,96	0/0:2,0:2:6.01:0,6,67	0/0:1,0:1:3.01:0,3,39	0/0:3,0:3:2.94:0,3,18	0/0:7,0:7:8.94:0,9,81	0/0:6,0:5:5.95:0,6,56	./.	0/0:7,0:7:14.85:0,15,116	./.
chr10	86353630	.	CT	C	375.42	PASS	AB=0.936;AC=4;AF=0.071;AN=56;BaseQRankSum=5.329;DP=379;FS=0.770;HRun=9;HaplotypeScore=50.1455;InbreedingCoeff=0.4263;MQ=96.56;MQ0=10;MQRankSum=0.462;QD=4.04;ReadPosRankSum=0.336;VQSLOD=-0.6050;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:51.01:467,51,0	0/0:9,0:8:24.04:0,24,263	0/1:58,1:29:5.60:6,0,291	0/0:59,0:28:23.40:0,23,293	0/0:5,0:5:9.03:0,9,104	0/0:14,1:15:11.64:0,12,378	0/0:9,0:9:24.06:0,24,268	0/0:17,0:17:33.05:0,33,358	0/0:8,0:8:24.07:0,24,277	0/0:12,0:12:36.11:0,36,416	0/0:9,0:9:27.07:0,27,303	0/1:7,1:8:9.42:9,0,146	0/0:3,0:3:9.03:0,9,104	0/0:8,0:8:24.04:0,24,256	0/0:7,0:7:21.06:0,21,242	0/0:4,0:4:9.03:0,9,104	0/0:23,0:23:66.20:0,66,761	0/0:17,0:16:42.12:0,42,485	0/0:14,1:15:14.64:0,15,408	0/0:7,0:7:18.04:0,18,197	0/0:5,0:5:15.04:0,15,173	0/0:7,0:7:21.05:0,21,234	0/0:6,0:6:15.04:0,15,173	0/0:9,0:9:27.07:0,27,302	0/0:8,0:8:24.07:0,24,277	0/0:8,0:8:24.04:0,24,263	0/0:9,0:9:24.04:0,24,263	0/0:6,0:6:18.05:0,18,208
chr10	86354735	.	AAAC	A	739.83	PASS	AB=0.985;AC=13;AF=0.232;AN=56;BaseQRankSum=2.128;DP=456;FS=27.076;HRun=0;HaplotypeScore=76.1370;InbreedingCoeff=0.0516;MQ=63.93;MQ0=7;MQRankSum=1.113;QD=3.79;ReadPosRankSum=0.668;VQSLOD=-0.1051;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:32.09:0,32,267	0/1:7,0:7:11.29:11,0,64	0/1:32,0:13:1.29:1,0,214	0/0:15,0:7:17.92:0,18,149	0/0:15,0:15:33.21:0,33,298	0/0:19,0:18:50.54:0,51,555	0/0:12,0:12:35.43:0,35,359	1/1:5,12:15:19.81:298,20,0	0/0:13,0:13:35.97:0,36,404	0/1:20,0:20:70.28:151,0,70	0/1:15,0:15:31.27:31,0,123	0/0:20,0:20:59.68:0,60,651	0/0:12,0:12:32.87:0,33,299	0/0:16,0:16:41.89:0,42,464	0/0:13,0:13:13.06:0,13,248	0/0:10,0:10:24.02:0,24,325	0/1:22,1:24:21.33:137,0,21	0/0:15,0:15:32.71:0,33,247	0/1:11,0:9:29.54:65,0,30	0/0:17,0:17:3.96:0,4,269	0/1:22,1:23:99:106,0,164	0/0:9,0:8:20.98:0,21,275	0/0:13,0:12:21.39:0,21,222	0/0:23,0:23:65.84:0,66,858	0/0:16,0:16:46.27:0,46,482	0/1:18,1:19:59.27:59,0,201	0/1:23,0:23:17.34:17,0,112	1/1:4,0:4:2.76:16,3,0
chr10	86354736	.	AAC	A	1205.57	PASS	AB=0.869;AC=17;AF=0.304;AN=56;BaseQRankSum=-0.491;DP=442;FS=32.278;HRun=0;HaplotypeScore=66.3911;InbreedingCoeff=0.4130;MQ=64.01;MQ0=7;MQRankSum=1.441;QD=6.00;ReadPosRankSum=-0.926;VQSLOD=1.0221;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:39.88:0,40,266	0/1:6,0:6:19.14:19,0,22	0/1:31,1:13:1.39:1,0,197	0/0:16,0:8:20.75:0,21,184	0/0:14,0:14:28.06:0,28,212	0/0:18,0:17:35.79:0,36,417	0/0:12,0:12:21.30:0,21,280	1/1:17,0:15:19.93:281,20,0	0/0:16,0:16:37.97:0,38,356	0/1:7,11:18:5.65:229,0,6	0/1:6,5:11:30.20:87,0,30	0/0:20,0:20:39.76:0,40,443	0/0:11,0:11:23.59:0,24,198	0/0:17,0:17:34.79:0,35,339	0/0:11,0:11:12.62:0,13,130	0/0:10,0:10:23.98:0,24,249	1/1:7,15:22:14.55:141,15,0	0/0:14,0:14:20.37:0,20,152	1/1:12,0:10:20.70:180,21,0	0/1:15,1:16:41.14:41,0,149	0/1:21,2:23:64.33:175,0,64	0/0:9,0:8:17.99:0,18,210	0/0:11,0:10:17.61:0,18,157	0/0:23,0:23:53.50:0,53,586	0/0:16,0:16:36.67:0,37,334	0/1:16,1:17:70.55:100,0,71	1/1:21,2:23:4.61:36,5,0	1/1:3,1:4:11.60:95,12,0
chr10	86355027	.	G	GA	4098.70	PASS	AB=0.706;AC=22;AF=0.393;AN=56;BaseQRankSum=-6.352;DP=509;FS=3.998;HRun=10;HaplotypeScore=55.4660;InbreedingCoeff=0.7151;MQ=65.47;MQ0=2;MQRankSum=-1.525;QD=16.53;ReadPosRankSum=1.004;VQSLOD=4.0270;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:38:49.33:250,49,0	0/1:3,5:8:3.59:159,0,4	0/0:15,0:10:7.79:0,8,112	0/0:12,0:10:12.38:0,12,124	0/0:16,0:16:41.93:0,42,345	0/0:12,0:12:23.95:0,24,196	0/0:26,0:26:31.25:0,31,374	1/1:11,8:18:15.73:279,16,0	0/0:18,0:18:41.93:0,42,342	1/1:5,16:20:20.47:423,20,0	0/1:6,9:15:40.32:194,0,40	0/0:15,0:15:32.94:0,33,271	0/1:10,0:10:3.84:4,0,126	0/0:15,0:15:41.92:0,42,341	0/0:26,0:26:59.89:0,60,487	0/0:8,0:8:20:0,20,154	1/1:5,21:27:63.03:654,63,0	0/0:31,0:31:83.82:0,84,681	1/1:4,16:20:45.11:479,45,0	1/1:0,16:16:37.91:389,38,0	1/1:7,10:17:8.28:278,8,0	0/0:18,1:19:19.26:0,19,362	0/0:10,0:10:23.96:0,24,197	0/0:24,0:26:38.59:0,39,447	0/0:11,0:11:29.96:0,30,246	1/1:5,21:26:29.45:517,29,0	1/1:9,13:22:19.39:363,19,0	0/1:2,5:7:31.24:110,0,31
chr10	86355419	.	TA	T	913.02	PASS	AB=0.736;AC=21;AF=0.375;AN=56;BaseQRankSum=3.790;DP=414;FS=3.488;HRun=16;HaplotypeScore=56.8590;InbreedingCoeff=0.3173;MQ=73.43;MQ0=4;MQRankSum=0.841;QD=4.13;ReadPosRankSum=4.570;VQSLOD=0.5584;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:33:20.50:98,20,0	0/1:2,7:9:29.71:69,0,30	0/0:29,0:14:8.22:0,8,90	0/1:22,0:12:7.53:8,0,43	0/0:14,0:16:17.75:0,18,127	0/1:13,2:15:15.19:15,0,88	0/0:15,1:16:11.90:0,12,196	0/1:11,6:17:8.53:60,0,9	0/0:11,0:15:14.94:0,15,120	1/1:0,8:8:14.54:90,15,0	1/1:2,6:8:20.53:125,21,0	0/0:9,0:9:9.13:0,9,131	0/0:3,0:4:8.83:0,9,65	0/0:6,0:6:11.82:0,12,87	0/0:6,0:6:7.80:0,8,52	0/0:8,0:8:5.99:0,6,50	1/1:9,13:22:28.38:178,28,0	0/0:23,0:26:51.18:0,51,367	0/1:9,9:20:17.21:110,0,17	0/1:11,9:21:17.30:119,0,17	1/1:2,1:3:2.92:18,3,0	0/0:11,0:14:29.79:0,30,236	0/0:9,0:12:20.65:0,21,151	0/0:9,1:12:6.20:0,6,112	0/0:17,0:18:36.91:0,37,262	0/1:10,12:22:18.24:129,0,18	1/1:4,4:7:2.90:18,3,0	1/1:7,4:12:0.19:57,0,0
chr10	86356680	.	G	GTAC	2311.92	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.004;DP=674;FS=0.636;HRun=0;HaplotypeScore=94.3628;InbreedingCoeff=0.9800;MQ=88.94;MQ0=0;MQRankSum=-6.531;QD=56.39;ReadPosRankSum=2.575;VQSLOD=5.2803;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,38:41:99:2407,108,0	0/0:5,0:5:15.05:0,15,233	0/0:28,0:28:66.19:0,66,1012	0/0:25,0:25:60.92:0,61,903	0/0:24,0:24:69.21:0,69,1098	0/0:20,0:20:60.20:0,60,968	0/0:41,0:41:99:0,117,1829	0/0:21,0:21:57.19:0,57,899	0/0:20,0:20:60.20:0,60,974	0/0:27,0:27:75.24:0,75,1195	0/0:15,0:15:45.15:0,45,730	0/0:20,0:20:60.19:0,60,947	0/0:28,0:28:75.26:0,75,1215	0/0:21,0:21:60.19:0,60,953	0/0:29,0:29:87.30:0,87,1416	0/0:32,0:32:96.33:0,96,1561	0/0:28,0:28:81.28:0,81,1318	0/0:21,0:21:60.20:0,60,964	0/0:22,0:22:60.19:0,60,954	0/0:19,0:19:54.18:0,54,882	0/0:48,0:48:99:0,132,2119	0/0:20,0:20:54.18:0,54,880	0/0:11,0:11:30.07:0,30,439	0/0:34,0:34:99:0,99,1565	0/0:16,0:16:45.14:0,45,699	0/0:21,0:21:60.20:0,60,974	0/0:30,0:30:81.26:0,81,1292	0/0:7,0:7:21.01:0,21,245
chr10	86356888	.	GTCT	G	2117.32	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.547;DP=542;FS=0.000;HRun=0;HaplotypeScore=89.6354;InbreedingCoeff=0.9525;MQ=75.87;MQ0=3;MQRankSum=-0.376;QD=29.00;ReadPosRankSum=-0.009;VQSLOD=3.7546;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:62.83:0,63,795	1/1:3,9:12:17.67:253,18,0	0/0:19,0:14:21.37:0,21,288	0/0:17,0:14:3.57:0,4,59	0/0:29,0:29:81.20:0,81,1406	0/0:24,0:24:66.12:0,66,1184	0/0:22,0:22:60.18:0,60,1138	0/0:26,0:26:66.77:0,67,1043	0/0:13,0:13:27.09:0,27,543	1/1:3,16:19:51.12:689,51,0	1/1:1,15:16:41.89:494,42,0	0/0:17,0:17:48.08:0,48,871	0/0:15,0:15:39.12:0,39,757	0/0:15,0:15:42.12:0,42,786	0/0:15,0:15:42.12:0,42,778	0/0:18,0:18:48.16:0,48,941	1/1:6,20:26:54.18:840,54,0	0/0:24,0:24:60.14:0,60,1121	0/0:30,0:30:84.24:0,84,1449	0/0:25,0:25:69.21:0,69,1254	0/0:19,0:19:39.06:0,39,659	0/0:16,0:16:44.15:0,44,744	0/0:18,0:18:54.13:0,54,960	0/0:11,0:11:27.06:0,27,443	0/0:16,0:16:42.14:0,42,849	0/0:21,0:21:57.18:0,57,1086	0/0:22,0:22:53.99:0,54,853	0/0:11,0:11:27.06:0,27,482
chr10	86356895	.	TC	T	794.64	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=11.276;DP=533;FS=0.494;HRun=1;HaplotypeScore=70.0634;InbreedingCoeff=0.8428;MQ=67.09;MQ0=5;MQRankSum=-1.605;QD=11.35;ReadPosRankSum=-0.075;VQSLOD=1.5912;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:33.86:0,34,392	0/1:9,0:9:8.11:88,0,8	0/0:14,0:8:20.51:0,21,202	0/0:11,0:8:10.18:0,10,78	0/0:28,0:28:59.49:0,59,878	0/0:25,0:25:68.14:0,68,792	0/0:24,0:24:62.50:0,62,773	0/0:28,0:27:71.74:0,72,767	0/0:11,0:11:30.06:0,30,377	1/1:17,1:18:49.93:330,50,0	1/1:15,1:16:17.58:232,18,0	0/0:17,0:17:48.04:0,48,570	0/0:14,0:14:39.10:0,39,488	0/0:15,0:14:36.26:0,36,475	0/0:15,0:15:42.09:0,42,503	0/0:17,0:17:47.77:0,48,589	1/1:24,3:27:27.89:293,28,0	0/0:25,0:25:69.11:0,69,817	0/0:31,0:31:86.95:0,87,970	0/0:27,0:27:66.89:0,67,770	0/0:14,0:14:42.04:0,42,462	0/0:15,0:15:39.49:0,39,437	0/0:22,0:22:59.82:0,60,684	0/0:14,0:14:35.82:0,36,364	0/0:16,0:16:41.99:0,42,522	0/0:21,0:20:59.84:0,60,712	0/0:24,0:24:42.84:0,43,643	0/0:9,0:9:23.31:0,23,293
chr10	86356945	.	C	CGCTTGCTA	829.29	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=3.494;DP=555;FS=1.497;HRun=0;HaplotypeScore=121.7263;InbreedingCoeff=0.8287;MQ=52.96;MQ0=43;MQRankSum=-4.324;QD=55.29;ReadPosRankSum=-0.521;VQSLOD=3.5953;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,5:13:21.07:921,21,0	0/0:7,0:7:15.05:0,15,439	0/0:29,0:1:3.01:0,3,88	./.	0/0:24,0:23:66.21:0,66,1762	0/0:19,0:19:54.14:0,54,1428	0/0:25,0:25:69.22:0,69,1892	0/0:24,0:21:54.19:0,54,1525	0/0:12,0:11:33.11:0,33,962	0/0:23,0:21:57.20:0,57,1629	0/0:14,0:14:36.12:0,36,964	0/0:14,0:14:39.13:0,39,1097	0/0:12,0:11:33.11:0,33,965	0/0:15,0:13:39.13:0,39,1056	0/0:24,0:23:69.24:0,69,1999	0/0:15,0:15:39.13:0,39,1101	0/0:24,0:24:60.21:0,60,1716	0/0:30,0:30:87.26:0,87,2449	0/0:21,0:17:45.58:0,46,1240	0/0:24,0:24:72.25:0,72,2107	0/0:32,0:31:90.31:0,90,2514	0/0:16,0:15:45.15:0,45,1295	0/0:14,0:14:39.13:0,39,1088	0/0:25,0:25:72.20:0,72,1911	0/0:17,0:16:48.16:0,48,1324	0/0:21,0:20:54.19:0,54,1528	0/0:21,0:21:63.20:0,63,1731	0/0:7,0:6:18.06:0,18,527
chr10	86357475	.	TG	T	946.43	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.081;DP=602;FS=3.580;HRun=3;HaplotypeScore=54.8151;InbreedingCoeff=0.9015;MQ=85.30;MQ0=0;MQRankSum=-5.848;QD=25.58;ReadPosRankSum=-1.019;VQSLOD=2.6444;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,34:37:84.26:1041,84,0	0/0:7,0:7:21.07:0,21,301	0/0:19,0:19:39.13:0,39,561	0/0:18,0:18:51.12:0,51,667	0/0:26,0:26:69.23:0,69,992	0/0:26,0:25:78.24:0,78,1087	0/0:27,0:27:69.23:0,69,989	0/0:31,0:31:87.29:0,87,1246	0/0:19,0:19:54.18:0,54,776	0/0:24,0:24:72.24:0,72,1036	0/0:18,0:18:54.17:0,54,755	0/0:29,0:29:81.25:0,81,1141	0/0:17,0:17:45.13:0,45,629	0/0:20,0:20:60.20:0,60,861	0/0:14,0:14:42.14:0,42,603	0/0:11,0:11:30.10:0,30,432	0/0:25,0:25:75.25:0,75,1080	0/0:27,0:27:81.26:0,81,1143	0/0:24,0:24:69.23:0,69,985	0/0:19,0:19:51.17:0,51,733	0/0:50,0:50:99:0,147,2115	0/0:15,0:15:45.12:0,45,609	0/0:16,0:16:48.16:0,48,679	0/0:21,0:21:60.20:0,60,864	0/0:20,0:20:60.20:0,60,864	0/0:18,0:18:54.18:0,54,778	0/0:22,0:21:63.20:0,63,890	0/0:2,0:2:6.02:0,6,83
chr10	86358137	.	A	ATTATTTAT	4658.10	PASS	AC=22;AF=0.440;AN=50;BaseQRankSum=0.842;DP=322;FS=10.183;HRun=0;HaplotypeScore=77.5540;InbreedingCoeff=0.7089;MQ=74.19;MQ0=0;MQRankSum=-7.654;QD=29.48;ReadPosRankSum=-3.131;VQSLOD=2.6023;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:42.11:0,42,879	1/1:3,1:4:3.01:123,3,0	./.	./.	0/0:6,0:6:6.02:0,6,150	0/0:21,0:21:36.12:0,36,876	0/0:10,0:11:6.02:0,6,126	1/1:41,0:41:48.09:1295,48,0	0/0:6,0:6:9.01:0,9,174	1/1:7,3:10:12.04:367,12,0	1/1:9,5:14:18.06:704,18,0	0/0:7,0:7:12.01:0,12,200	0/0:6,0:6:6.02:0,6,150	0/0:7,0:7:6.02:0,6,150	0/0:9,0:9:9.03:0,9,209	0/0:6,0:6:3:0,3,25	1/1:13,10:26:30.10:1200,30,0	0/0:23,0:23:42.14:0,42,1029	1/1:15,0:18:11.99:256,12,0	1/1:3,0:4:3.01:104,3,0	1/1:6,0:6:9.77:64,10,0	0/0:4,0:4:3.01:0,3,74	./.	0/0:4,0:4:3.01:0,3,75	0/0:10,0:10:15.04:0,15,324	1/1:6,0:6:5.91:38,6,0	1/1:9,0:11:3.01:105,3,0	1/1:12,0:18:12.04:403,12,0
chr10	86359855	.	C	CA	4331.33	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-11.802;DP=696;FS=1.152;HRun=8;HaplotypeScore=71.6524;InbreedingCoeff=0.9972;MQ=82.56;MQ0=0;MQRankSum=-0.240;QD=26.90;ReadPosRankSum=-1.131;VQSLOD=5.0971;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,1122	0/0:8,0:8:21:0,21,191	0/0:27,0:27:19.51:0,20,300	0/0:16,0:17:22.99:0,23,187	0/0:26,0:26:63:0,63,568	0/0:21,0:21:57.01:0,57,516	0/0:23,0:23:63.01:0,63,572	1/1:3,24:27:60.31:755,60,0	0/0:33,0:33:81.01:0,81,732	0/0:31,0:32:86.06:0,86,767	0/0:13,0:13:36.02:0,36,329	0/0:34,0:34:89.97:0,90,803	0/0:30,0:30:84.01:0,84,756	0/0:28,0:28:81.04:0,81,741	0/0:22,0:23:59.05:0,59,527	0/0:21,0:21:56.98:0,57,505	0/0:27,0:27:78.02:0,78,708	0/0:33,0:33:92.92:0,93,821	1/1:2,21:23:63.13:684,63,0	1/1:4,15:19:39.06:434,39,0	1/1:3,36:40:87.09:984,87,0	0/0:29,0:29:80.94:0,81,717	0/0:17,0:17:41.86:0,42,370	0/0:26,0:26:72.02:0,72,654	0/0:21,0:21:63.03:0,63,576	1/1:4,18:22:46.28:603,46,0	1/1:2,17:18:23.71:525,24,0	1/1:1,10:11:30.09:346,30,0
chr10	86360833	.	GTTGT	G	4517.47	PASS	AB=0.955;AC=17;AF=0.304;AN=56;BaseQRankSum=8.974;DP=666;FS=2.573;HRun=0;HaplotypeScore=121.4680;InbreedingCoeff=0.8619;MQ=62.75;MQ0=5;MQRankSum=-2.763;QD=21.72;ReadPosRankSum=0.849;VQSLOD=4.7349;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:30:30.03:279,30,0	0/0:7,0:16:27.06:0,27,431	0/0:35,0:23:3.01:0,3,72	0/0:44,0:31:23.76:0,24,495	0/0:24,0:24:42.14:0,42,982	0/0:27,0:26:57.19:0,57,1355	0/0:29,0:29:57.20:0,57,1356	1/1:21,8:29:21.07:323,21,0	0/0:17,0:17:48.15:0,48,1074	0/0:15,0:35:66.22:0,66,1097	0/0:5,0:19:41.99:0,42,649	0/0:10,0:10:21.07:0,21,504	0/0:19,0:19:42.14:0,42,1009	0/0:18,0:18:51.18:0,51,1210	0/0:19,1:20:0.13:0,0,1006	0/0:9,0:9:24.08:0,24,577	0/0:9,0:20:30.10:0,30,545	0/0:34,1:35:28.39:0,28,2050	1/1:10,7:16:20.98:336,21,0	1/1:5,18:23:51.17:790,51,0	1/1:7,13:21:24.07:364,24,0	0/0:16,0:16:24.08:0,24,550	0/1:20,1:21:5.88:6,0,863	0/0:40,1:41:45.29:0,45,2098	0/0:24,0:24:51.16:0,51,1131	1/1:9,23:33:69.23:1074,69,0	1/1:4,19:23:57.19:913,57,0	1/1:1,9:10:27.09:432,27,0
chr10	86361722	.	AG	A	646.75	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.760;DP=522;FS=8.275;HRun=6;HaplotypeScore=49.9611;InbreedingCoeff=0.7486;MQ=79.51;MQ0=0;MQRankSum=-0.359;QD=22.30;ReadPosRankSum=1.164;VQSLOD=2.4110;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:69.17:741,69,0	0/0:10,0:10:24.06:0,24,296	0/0:14,0:14:5.96:0,6,214	0/0:13,0:13:29.30:0,29,336	0/0:8,0:8:24.06:0,24,301	0/0:15,0:14:42.13:0,42,537	0/0:45,0:45:99:0,132,1684	0/0:25,0:25:66.18:0,66,826	0/0:18,0:18:45.14:0,45,573	0/0:18,0:18:45.07:0,45,572	0/0:2,0:2:6.02:0,6,78	0/0:32,0:32:93.29:0,93,1197	0/0:13,0:13:33.09:0,33,420	0/0:23,0:23:66.20:0,66,851	0/0:16,0:16:45.13:0,45,575	0/0:11,0:11:33.09:0,33,419	0/0:31,0:31:78.24:0,78,1012	0/0:23,0:23:60.17:0,60,771	0/0:14,0:14:39.13:0,39,512	0/0:3,0:3:6.02:0,6,78	0/0:54,0:54:99:0,144,1834	0/0:8,0:8:21.07:0,21,276	0/0:7,0:7:21.07:0,21,275	0/0:32,0:32:87.26:0,87,1116	0/0:14,0:14:42.13:0,42,535	0/0:17,0:17:51.14:0,51,630	0/0:18,0:18:51.15:0,51,644	0/0:9,0:9:27.08:0,27,341
chr10	86361967	.	C	CTG	167.97	PASS	AB=0.929;AC=12;AF=0.261;AN=46;BaseQRankSum=-3.173;DP=501;FS=1.807;HRun=0;HaplotypeScore=81.0377;InbreedingCoeff=0.2029;MQ=67.55;MQ0=16;MQRankSum=1.904;QD=0.91;ReadPosRankSum=-1.696;VQSLOD=1.4620;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:5,0:8:8.52:0,9,42	./.	./.	./.	0/0:4,0:4:2.84:0,3,14	0/0:25,0:32:13.97:0,14,67	0/1:25,0:24:0:0,0,0	0/0:15,0:20:14.67:0,15,71	0/0:16,0:18:2.84:0,3,14	0/1:5,0:9:0:0,0,0	0/0:20,0:23:8.52:0,9,42	0/0:7,0:9:2.84:0,3,14	0/0:13,0:17:11.36:0,11,56	0/0:16,0:19:11.36:0,11,56	0/0:10,0:11:5.59:0,6,26	0/0:14,0:17:8.18:0,8,37	0/0:13,0:13:5.80:0,6,46	./.	1/1:5,0:5:3.01:44,3,0	0/1:54,7:65:25.57:38,0,26	0/0:11,0:10:5.19:0,5,21	0/0:9,0:12:5.65:0,6,28	0/1:20,7:32:49.27:117,0,49	0/1:10,0:10:0:0,0,0	0/1:18,0:18:29.23:32,0,29	1/1:9,1:14:3.01:44,3,0	1/1:4,0:4:0.47:1,0,0
chr10	86362102	.	T	TAGTC	1569.71	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.380;DP=488;FS=0.823;HRun=0;HaplotypeScore=83.9149;InbreedingCoeff=0.8740;MQ=89.07;MQ0=0;MQRankSum=-2.256;QD=50.64;ReadPosRankSum=0.610;VQSLOD=4.1500;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:30:66.22:1664,66,0	0/0:3,0:3:5.99:0,6,112	0/0:19,0:19:42.08:0,42,711	0/0:21,0:22:50.73:0,51,801	0/0:12,0:11:24.08:0,24,447	0/0:16,0:16:39.10:0,39,658	0/0:28,0:28:78.26:0,78,1425	0/0:29,0:29:78.26:0,78,1415	0/0:15,0:15:39.13:0,39,727	0/0:18,0:18:48.12:0,48,831	0/0:10,0:10:27.06:0,27,464	0/0:13,0:13:31.92:0,32,564	0/0:14,0:14:39.12:0,39,695	0/0:19,0:19:54.19:0,54,998	0/0:17,0:17:48.16:0,48,895	0/0:12,0:12:33.11:0,33,609	0/0:34,0:33:87.16:0,87,1595	0/0:20,0:20:60.21:0,60,1097	0/0:12,0:12:33.10:0,33,533	0/0:5,0:5:15.04:0,15,249	0/0:48,0:48:99:0,135,2309	0/0:11,0:11:30.09:0,30,528	0/0:12,0:12:27.07:0,27,444	0/0:20,0:20:54.18:0,54,978	0/0:18,0:18:48.16:0,48,887	0/0:13,0:13:36.12:0,36,660	0/0:5,0:5:15.05:0,15,280	0/0:12,0:12:27.09:0,27,483
chr10	86362281	.	TG	T	1328.09	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.553;DP=500;FS=4.272;HRun=1;HaplotypeScore=47.3923;InbreedingCoeff=0.8622;MQ=61.62;MQ0=8;MQRankSum=1.803;QD=35.89;ReadPosRankSum=1.092;VQSLOD=3.6385;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:99:1423,102,0	0/0:5,0:5:15.05:0,15,239	0/0:15,0:5:8.98:0,9,95	0/0:25,0:9:15.81:0,16,269	0/0:13,0:13:33.10:0,33,504	0/0:19,0:19:54.18:0,54,863	0/0:17,0:17:51.17:0,51,795	0/0:34,0:34:99:0,102,1564	0/0:18,0:18:54.18:0,54,863	0/0:15,0:15:45.15:0,45,707	0/0:20,0:20:60.20:0,60,952	0/0:16,0:16:45.15:0,45,719	0/0:14,0:14:42.14:0,42,671	0/0:18,0:18:54.17:0,54,830	0/0:18,0:18:51.16:0,51,772	0/0:15,0:15:45.15:0,45,709	0/0:33,0:33:99:0,99,1548	0/0:29,0:29:87.26:0,87,1363	0/0:22,0:21:63.16:0,63,956	0/0:4,0:4:12.04:0,12,192	0/0:19,0:19:57.19:0,57,907	0/0:6,0:6:18.06:0,18,288	0/0:10,0:10:27.09:0,27,432	0/0:22,0:22:63.20:0,63,972	0/0:13,0:13:36.09:0,36,508	0/0:20,0:20:60.20:0,60,958	0/0:17,0:17:51.17:0,51,815	0/0:6,0:6:12.01:0,12,187
chr10	86362497	.	TAAA	T	589.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.945;DP=392;FS=9.904;HRun=14;HaplotypeScore=57.1846;InbreedingCoeff=0.6172;MQ=58.35;MQ0=3;MQRankSum=1.322;QD=21.07;ReadPosRankSum=3.077;VQSLOD=1.6928;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:28:60.50:684,61,0	0/0:4,0:4:12.01:0,12,190	0/0:10,0:4:11.61:0,12,105	0/0:12,0:5:6.49:0,6,74	0/0:21,0:21:51.10:0,51,833	0/0:24,0:25:72.21:0,72,1235	0/0:8,0:8:12.03:0,12,181	0/0:21,0:21:45.15:0,45,797	0/0:9,0:9:18.06:0,18,338	0/0:16,0:19:51.15:0,51,842	0/0:5,0:5:9.03:0,9,166	0/0:9,0:10:23.99:0,24,319	0/0:6,0:6:15:0,15,217	0/0:7,0:7:15.04:0,15,238	0/0:7,0:7:15.05:0,15,282	0/0:17,0:18:36.07:0,36,552	0/0:40,0:40:99:0,114,1930	0/0:21,0:22:54.18:0,54,993	0/0:16,0:17:42.05:0,42,628	0/0:5,0:5:9.02:0,9,139	0/0:7,0:7:18.06:0,18,317	0/0:2,0:2:3.90:0,4,57	0/0:5,0:5:9.03:0,9,153	0/0:8,0:8:18.04:0,18,277	0/0:18,0:19:45.05:0,45,720	0/0:13,0:12:33.04:0,33,518	0/0:15,0:18:54.13:0,54,839	0/0:19,0:21:43.32:0,43,609
chr10	86362564	.	GAGGA	G	1177.16	PASS	AB=1.000;AC=17;AF=0.386;AN=44;BaseQRankSum=-0.637;DP=350;FS=7.841;HRun=0;HaplotypeScore=64.4100;InbreedingCoeff=0.6122;MQ=68.58;MQ0=13;MQRankSum=-0.749;QD=7.45;ReadPosRankSum=2.126;VQSLOD=0.2771;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:17.84:18,0,503	./.	./.	./.	0/0:9,0:9:3.01:0,3,52	0/0:10,0:10:6.01:0,6,78	0/0:23,0:22:27.05:0,27,433	./.	0/0:6,0:8:9.02:0,9,126	1/1:5,2:7:6.01:71,6,0	1/1:5,6:11:12.04:183,12,0	0/0:4,0:5:6.02:0,6,102	0/0:6,0:5:6:0,6,85	0/0:9,0:9:12.44:0,12,188	0/0:5,0:11:18.01:0,18,255	0/0:5,0:6:9.02:0,9,131	1/1:19,19:38:22.78:449,23,0	1/1:10,12:22:24.08:367,24,0	1/1:9,0:9:3:28,3,0	./.	1/1:10,0:17:2.80:13,3,0	0/0:4,0:4:9.44:0,9,78	0/0:7,0:7:3.01:0,3,52	0/0:8,0:17:12.04:0,12,222	0/0:11,0:11:2.97:0,3,20	1/1:5,0:11:14.85:126,15,0	1/1:11,0:12:9.01:83,9,0	./.
chr10	86362794	.	TTC	T	329.98	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.572;DP=230;FS=1.593;HRun=0;HaplotypeScore=30.3000;InbreedingCoeff=0.3982;MQ=69.53;MQ0=2;MQRankSum=-1.974;QD=23.57;ReadPosRankSum=0.697;VQSLOD=3.6072;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,7:14:30.10:423,30,0	0/0:1,0:1:3.01:0,3,49	0/0:24,0:9:10.45:0,10,224	0/0:23,0:12:9.75:0,10,102	0/0:10,0:9:27.09:0,27,443	0/0:8,0:8:24.07:0,24,371	0/0:5,0:5:15.01:0,15,217	0/0:14,0:13:30.10:0,30,497	0/0:6,0:6:11.93:0,12,171	0/0:14,0:14:39.10:0,39,593	0/0:2,0:2:3.01:0,3,50	0/0:5,0:5:15.05:0,15,225	0/0:4,0:4:6:0,6,85	0/0:6,0:6:15.05:0,15,246	0/0:5,0:5:15.04:0,15,219	0/0:4,0:3:9.03:0,9,148	0/0:13,0:13:36.10:0,36,553	0/0:4,0:4:9.03:0,9,143	0/0:15,0:14:42.12:0,42,647	0/0:1,0:1:3.01:0,3,49	0/0:10,0:10:23.98:0,24,317	0/0:2,0:2:6.02:0,6,99	0/0:2,0:2:3:0,3,48	0/0:5,0:5:12.03:0,12,173	0/0:4,0:4:12.04:0,12,197	0/0:14,0:14:36.05:0,36,516	0/0:5,0:5:15.02:0,15,173	0/0:10,0:10:30.09:0,30,466
chr10	86363003	.	GAA	G	1150.82	PASS	AB=0.500;AC=39;AF=0.813;AN=48;BaseQRankSum=-2.889;DP=102;FS=25.185;HRun=10;HaplotypeScore=17.5372;InbreedingCoeff=0.3310;MQ=33.60;MQ0=2;MQRankSum=1.479;QD=14.39;ReadPosRankSum=2.207;VQSLOD=-0.1637;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,7:7:2.86:33,3,0	1/1:0,2:2:5.98:53,6,0	0/0:5,0:2:5.83:0,6,38	0/0:9,0:1:2.80:0,3,13	1/1:0,6:6:2.95:20,3,0	1/1:1,4:5:8.90:59,9,0	1/1:0,5:5:6.01:66,6,0	1/1:0,1:1:3.01:33,3,0	1/1:0,2:2:5.98:53,6,0	1/1:0,3:3:9.02:100,9,0	1/1:0,3:3:6.01:67,6,0	1/1:0,7:7:11.89:93,12,0	./.	0/0:1,0:1:0:0,0,0	1/1:0,3:3:8.98:86,9,0	1/1:0,2:2:3.01:33,3,0	1/1:0,4:4:6.01:67,6,0	1/1:3,2:4:12.03:144,12,0	1/1:0,2:2:6.02:67,6,0	1/1:0,2:2:3:32,3,0	./.	./.	0/0:0,4:4:0:0,0,0	0/1:0,6:6:0.17:0,0,0	1/1:0,1:1:2.97:20,3,0	1/1:1,3:4:9.02:100,9,0	1/1:0,9:9:11.99:125,12,0	./.
chr10	86363026	.	G	GA	929.79	PASS	AB=0.859;AC=23;AF=0.411;AN=56;BaseQRankSum=-0.551;DP=283;FS=1.088;HRun=13;HaplotypeScore=35.3843;InbreedingCoeff=0.0852;MQ=47.20;MQ0=10;MQRankSum=-2.726;QD=5.08;ReadPosRankSum=-0.273;VQSLOD=0.5756;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,1:16:4.75:5,0,186	0/1:1,1:2:14.56:22,0,15	0/0:16,0:4:8.88:0,9,60	0/1:27,0:6:2.57:3,0,3	0/1:9,1:10:4.01:4,0,120	0/1:7,1:7:18.42:18,0,33	0/1:6,1:7:12.97:13,0,67	0/1:5,4:7:3.35:100,0,3	0/0:10,0:11:4.02:0,4,161	0/1:7,1:8:6.97:7,0,102	0/0:5,0:5:11.87:0,12,82	0/0:14,0:15:40.68:0,41,273	0/0:3,0:3:8.75:0,9,54	0/0:8,0:9:21.64:0,22,146	0/0:8,0:8:14.59:0,15,94	0/1:9,0:9:15.95:16,0,50	0/0:10,0:10:14.80:0,15,103	1/1:2,7:8:3:28,3,0	0/1:12,3:14:20.35:102,0,20	0/1:3,1:4:14.58:22,0,15	1/1:3,4:6:6.01:56,6,0	0/1:5,2:7:15.95:16,0,50	0/0:11,0:11:22.84:0,23,150	0/0:11,0:10:12.35:0,12,84	0/1:7,1:8:4.03:4,0,120	1/1:9,7:17:25.68:234,26,0	1/1:2,11:13:38.83:340,39,0	1/1:1,5:6:12.01:111,12,0
chr10	86363595	.	T	TTAAATAAATAAA	4222.28	PASS	AC=16;AF=0.348;AN=46;BaseQRankSum=0.271;DP=274;FS=6.634;HRun=0;HaplotypeScore=89.5965;InbreedingCoeff=0.7033;MQ=53.30;MQ0=2;MQRankSum=-6.911;QD=36.09;ReadPosRankSum=-5.192;VQSLOD=1.7713;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:10:3.86:84,4,0	0/0:2,0:2:6.02:0,6,154	./.	./.	0/0:11,0:11:9.03:0,9,312	0/0:12,0:12:15.05:0,15,482	0/0:8,0:8:6.02:0,6,152	1/1:37,0:37:48.15:1591,48,0	0/0:3,0:3:3.01:0,3,67	0/0:12,0:12:12.04:0,12,416	0/0:9,0:9:15.05:0,15,467	0/0:4,0:4:9.03:0,9,258	./.	./.	0/0:7,0:7:15.05:0,15,491	0/0:6,0:6:3.01:0,3,67	0/0:29,0:29:57.07:0,57,1647	0/0:12,0:18:11.22:0,11,308	1/1:13,1:16:12.04:438,12,0	1/1:6,1:8:6.02:290,6,0	1/1:5,0:5:3.01:168,3,0	0/0:3,0:3:3.01:0,3,104	0/0:6,0:6:9.03:0,9,312	./.	0/0:10,0:10:15.05:0,15,520	1/1:5,1:6:6.02:351,6,0	1/1:7,4:12:11.42:611,11,0	1/1:18,1:23:15.05:690,15,0
chr10	86366797	.	A	AAATC	568.07	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.805;DP=693;FS=22.756;HRun=0;HaplotypeScore=108.7330;InbreedingCoeff=0.8784;MQ=68.72;MQ0=2;MQRankSum=0.174;QD=37.87;ReadPosRankSum=-0.003;VQSLOD=1.5563;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:87.26:0,87,1327	0/0:8,0:8:21.07:0,21,332	0/0:29,0:23:11.53:0,12,164	0/0:23,0:19:13.81:0,14,150	0/0:30,0:30:57.18:0,57,869	0/0:20,0:19:24.08:0,24,379	0/0:28,0:28:39.12:0,39,593	0/0:23,0:23:21.06:0,21,309	0/0:32,0:32:54.17:0,54,830	0/0:31,0:31:42.13:0,42,624	0/0:13,0:13:24.08:0,24,379	0/0:32,0:32:48.15:0,48,735	0/0:22,0:22:39.13:0,39,616	0/0:20,0:20:33.11:0,33,521	0/0:37,0:37:75.26:0,75,1184	0/0:30,0:30:60.20:0,60,925	0/0:32,0:32:66.16:0,66,945	1/1:6,9:14:30.06:662,30,0	0/0:19,0:19:21.03:0,21,310	0/0:24,0:24:51.16:0,51,783	0/0:40,0:40:78.26:0,78,1213	0/0:33,0:33:54.15:0,54,794	0/0:19,0:19:39.12:0,39,586	0/0:23,0:24:42.14:0,42,640	0/0:14,0:14:39.06:0,39,582	0/0:29,0:29:51.15:0,51,759	0/0:17,0:17:33.11:0,33,521	0/0:10,0:10:8.47:0,8,184
chr10	86367460	.	GTC	G	193.52	PASS	AB=0.909;AC=14;AF=0.269;AN=52;BaseQRankSum=1.926;DP=519;FS=0.940;HRun=0;HaplotypeScore=79.7570;InbreedingCoeff=0.0874;MQ=71.96;MQ0=14;MQRankSum=2.713;QD=1.24;ReadPosRankSum=1.608;VQSLOD=1.5545;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:10,0:8:1.23:0,1,3	0/0:49,0:23:5.74:0,6,51	0/0:69,0:33:17.23:0,17,193	0/0:9,0:16:9:0,9,96	0/1:13,0:14:29.53:30,0,195	0/1:22,6:28:48.36:48,0,294	0/0:24,0:24:24.01:0,24,273	0/1:14,0:14:42.01:42,0,226	0/0:13,0:13:17.89:0,18,151	0/1:10,0:9:0:0,0,0	0/1:16,3:19:3.55:4,0,375	0/0:10,0:10:8.74:0,9,97	0/0:6,0:6:5.74:0,6,38	0/1:14,0:14:63.76:64,0,225	0/1:10,1:11:21.61:22,0,125	./.	1/1:11,0:14:11.26:56,11,0	0/0:19,0:18:19.28:0,19,195	0/0:11,0:9:0:0,0,0	1/1:16,0:16:0.47:1,0,0	1/1:2,4:6:3.01:34,3,0	0/1:6,3:9:27.63:28,0,40	0/0:24,4:27:5.48:0,5,503	0/0:15,0:15:23.97:0,24,312	0/0:24,0:27:45.11:0,45,546	0/0:12,0:15:3:0,3,26	0/0:7,0:7:2.97:0,3,20
chr10	86368302	.	G	GT	4830.09	PASS	AB=0.707;AC=47;AF=0.870;AN=54;BaseQRankSum=-5.257;DP=565;FS=31.495;HRun=1;HaplotypeScore=84.6381;InbreedingCoeff=0.3037;MQ=53.94;MQ0=97;MQRankSum=-3.550;QD=9.64;ReadPosRankSum=2.284;VQSLOD=0.9696;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,18:20:4.38:41,0,4	1/1:14,0:12:5.30:44,5,0	0/1:26,0:9:11.12:11,0,234	0/0:27,0:18:12.86:0,13,446	./.	0/1:3,14:15:0:0,0,0	1/1:24,0:15:15.05:211,15,0	1/1:10,0:9:21.26:303,21,0	1/1:25,0:22:18.06:239,18,0	1/1:27,0:24:51.15:671,51,0	1/1:10,0:8:3.01:38,3,0	1/1:29,0:24:13.59:157,14,0	1/1:26,0:22:13.14:214,13,0	1/1:9,23:26:4.31:126,4,0	1/1:20,0:19:3.01:38,3,0	0/0:18,1:13:0.49:0,0,8	1/1:24,0:21:15.05:202,15,0	1/1:3,12:11:15.05:192,15,0	1/1:3,17:16:48.16:722,48,0	1/1:16,2:13:12.04:172,12,0	1/1:7,27:26:9.03:131,9,0	1/1:19,0:16:9.03:115,9,0	1/1:10,0:7:9.03:115,9,0	1/1:25,1:21:12.04:153,12,0	1/1:12,0:9:2.28:37,2,0	1/1:7,19:21:54.17:747,54,0	1/1:11,0:9:9.03:115,9,0	1/1:2,0:1:3.01:38,3,0
chr10	86369023	.	GCA	G	516.89	PASS	AB=0.929;AC=9;AF=0.188;AN=48;BaseQRankSum=1.214;DP=644;FS=9.509;HRun=0;HaplotypeScore=123.0845;InbreedingCoeff=0.7218;MQ=47.43;MQ0=40;MQRankSum=3.891;QD=6.98;ReadPosRankSum=-3.709;VQSLOD=1.9684;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,1:35:37.88:0,38,1138	0/0:11,0:11:21.07:0,21,326	./.	0/0:32,0:4:4.56:0,5,54	0/0:18,0:17:27.09:0,27,411	0/0:20,0:19:36.10:0,36,560	0/0:29,1:30:29.02:0,29,962	./.	0/0:30,0:30:78.25:0,78,1237	0/0:29,0:24:45.12:0,45,684	0/0:14,0:14:24.08:0,24,388	0/0:45,0:43:84.24:0,84,1341	0/1:24,2:26:17.13:17,0,778	0/0:27,0:27:54.04:0,54,788	0/0:29,0:29:51.17:0,51,821	0/0:21,0:20:51.17:0,51,833	0/0:45,0:45:87.27:0,87,1381	0/0:35,2:36:8.73:0,9,1235	./.	./.	1/1:23,13:30:31.31:393,31,0	0/0:15,0:15:24.08:0,24,394	0/0:10,0:10:15.05:0,15,236	0/0:56,4:60:35.14:0,35,1582	0/0:16,0:16:30.08:0,30,456	1/1:2,4:4:12.03:137,12,0	1/1:1,2:3:3.01:37,3,0	1/1:0,3:3:6.02:74,6,0
chr10	86369140	.	T	TAC	1477.78	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=-1.012;DP=880;FS=2.930;HRun=0;HaplotypeScore=146.1513;InbreedingCoeff=0.7992;MQ=50.38;MQ0=37;MQRankSum=-0.021;QD=18.71;ReadPosRankSum=-2.560;VQSLOD=3.2269;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:38.95:0,39,447	1/1:3,2:5:9.03:145,9,0	./.	0/0:33,0:10:2.02:0,2,64	0/0:14,0:13:14.96:0,15,140	0/0:23,0:22:29.40:0,29,300	0/0:37,0:38:78.20:0,78,920	0/0:14,0:12:20.85:0,21,216	0/0:38,0:38:87.18:0,87,1009	1/1:13,20:35:0.36:804,0,0	1/1:5,4:7:5.76:96,6,0	0/0:61,0:61:99:0,123,1457	0/0:24,0:25:66.02:0,66,767	0/0:44,0:44:99:0,102,1165	0/0:33,0:35:60.85:0,61,672	0/0:29,0:28:69.16:0,69,806	1/1:21,8:28:42.04:568,42,0	0/0:38,0:37:81.11:0,81,950	0/0:29,0:22:43.44:0,43,460	0/0:19,0:19:39.08:0,39,447	0/0:141,0:134:99:0,260,3047	0/0:12,0:12:21.06:0,21,252	0/0:10,0:9:11.83:0,12,122	0/0:48,0:47:96.25:0,96,1136	0/0:13,0:13:17.97:0,18,225	0/0:28,0:27:63.19:0,63,762	0/0:10,0:9:17.80:0,18,181	0/0:13,0:13:26.91:0,27,294
chr10	86369229	.	G	GCA	1236.04	PASS	AB=0.987;AC=16;AF=0.296;AN=54;BaseQRankSum=13.436;DP=719;FS=28.514;HRun=0;HaplotypeScore=138.5997;InbreedingCoeff=0.2447;MQ=56.23;MQ0=13;MQRankSum=-5.006;QD=3.87;ReadPosRankSum=0.814;VQSLOD=1.4270;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:23:27.63:121,28,0	1/1:4,0:4:3.69:9,4,0	0/0:35,0:10:23.58:0,24,237	0/0:40,0:9:20.08:0,20,297	0/0:11,0:10:27.08:0,27,410	0/0:14,0:14:33.11:0,33,509	0/0:35,0:35:99:0,102,1555	0/1:25,0:21:68.35:68,0,238	0/0:35,0:35:93.29:0,93,1406	0/1:24,2:24:99:175,0,109	./.	0/0:38,0:37:93.29:0,93,1380	0/0:26,0:26:72.24:0,72,1104	0/0:36,0:36:83.83:0,84,1291	0/0:20,0:20:50.90:0,51,773	0/0:24,0:24:67.11:0,67,1073	0/1:24,0:22:99:119,0,105	0/1:27,0:27:25.47:25,0,203	0/1:20,0:19:19.95:182,0,20	0/1:8,0:8:8.64:9,0,32	0/1:114,3:108:99:425,0,160	0/0:16,0:16:45.10:0,45,649	0/0:11,0:12:23.78:0,24,343	0/0:42,0:42:99:0,111,1761	0/0:14,0:13:21.06:0,21,340	0/1:17,0:17:17.47:135,0,17	1/1:19,0:19:10.82:94,11,0	1/1:5,0:5:11.43:44,11,0
chr10	86369230	.	T	TAC	10007.01	PASS	AC=24;AF=0.444;AN=54;BaseQRankSum=-8.750;DP=730;FS=4.489;HRun=0;HaplotypeScore=113.9349;InbreedingCoeff=0.9664;MQ=55.20;MQ0=15;MQRankSum=-0.687;QD=30.42;ReadPosRankSum=-1.630;VQSLOD=6.0423;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:25:43.03:729,43,0	1/1:1,3:4:9.03:156,9,0	0/0:33,0:10:13.10:0,13,154	0/0:39,0:8:13.65:0,14,182	0/0:11,0:10:27.05:0,27,327	0/0:14,0:14:33.11:0,33,430	0/0:36,0:36:93.23:0,93,1194	1/1:16,12:22:36.08:591,36,0	0/0:34,0:34:90.23:0,90,1155	1/1:10,18:25:66.07:1054,66,0	./.	0/0:38,0:37:81.25:0,81,1042	0/0:26,0:26:69.21:0,69,890	0/0:36,0:36:84.23:0,84,1086	0/0:22,0:22:48.15:0,48,630	0/0:26,0:26:63.21:0,63,839	1/1:13,11:22:35.99:586,36,0	1/1:7,20:27:26.37:569,26,0	1/1:3,16:19:38.87:673,39,0	1/1:2,6:8:6.02:104,6,0	1/1:54,67:110:99:3816,230,0	0/0:16,0:16:45.08:0,45,547	0/0:12,0:12:23.66:0,24,287	0/0:42,0:42:99:0,111,1458	0/0:14,0:13:20.96:0,21,222	1/1:3,14:17:43.03:696,43,0	1/1:2,16:18:45.15:775,45,0	1/1:0,5:5:15.05:260,15,0
chr10	86369267	.	G	GCA	1486.84	PASS	AB=0.804;AC=8;AF=0.143;AN=56;BaseQRankSum=-1.515;DP=730;FS=0.635;HRun=0;HaplotypeScore=121.8630;InbreedingCoeff=0.5057;MQ=55.13;MQ0=22;MQRankSum=-4.539;QD=15.33;ReadPosRankSum=-1.437;VQSLOD=2.9731;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:26:56.81:0,57,659	1/1:1,1:2:3.01:49,3,0	0/0:26,0:5:3.28:0,3,9	0/0:18,0:3:2.74:0,3,12	0/0:7,0:7:15.03:0,15,170	0/0:17,0:16:33.10:0,33,403	0/0:33,0:35:62.98:0,63,730	0/0:24,0:19:33.10:0,33,403	0/0:29,0:28:66.21:0,66,806	1/1:22,17:34:51.54:976,52,0	1/1:1,3:4:3.01:49,3,0	0/0:38,0:40:89.79:0,90,1013	0/0:28,0:29:63.16:0,63,742	0/0:35,0:35:78.23:0,78,953	0/0:28,0:29:69.01:0,69,795	0/0:27,0:27:60.17:0,60,721	0/1:14,16:29:64.16:539,0,64	0/0:13,0:13:26.51:0,27,370	0/0:41,0:34:75.24:0,75,916	0/0:6,0:5:3.01:0,3,36	0/0:95,0:93:99:0,174,2028	0/0:18,0:18:11.24:0,11,405	0/0:10,0:10:12.49:0,12,135	0/0:51,0:50:99:0,114,1363	0/0:12,0:10:14.88:0,15,160	0/1:19,1:18:4.13:4,0,397	0/0:21,0:20:50.95:0,51,594	0/0:10,0:10:24.08:0,24,293
chr10	86370330	.	GA	G	1901.37	PASS	AB=0.849;AC=26;AF=0.464;AN=56;BaseQRankSum=6.971;DP=451;FS=10.239;HRun=14;HaplotypeScore=57.6305;InbreedingCoeff=0.5713;MQ=60.41;MQ0=5;MQRankSum=0.185;QD=7.89;ReadPosRankSum=3.144;VQSLOD=1.8266;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,2:34:20.51:0,21,310	1/1:2,8:10:14.84:103,15,0	0/0:5,0:3:0.21:0,0,24	0/1:5,0:4:14.37:14,0,18	0/0:16,0:16:27.01:0,27,242	0/0:12,1:16:12.13:0,12,231	0/0:15,0:15:26.91:0,27,225	1/1:9,16:24:40.63:273,41,0	0/0:13,1:15:5.54:0,6,207	1/1:9,3:13:11.33:68,11,0	1/1:2,6:10:18.88:114,19,0	0/0:10,0:11:5.15:0,5,148	0/0:13,2:15:0.50:0,1,245	0/0:11,1:14:25.73:0,26,228	0/1:11,1:14:1.34:1,0,188	0/0:16,0:16:23.97:0,24,209	1/1:8,30:39:20.72:423,21,0	0/0:17,2:20:6.71:0,7,329	1/1:2,8:11:0.96:142,1,0	1/1:7,13:21:25.25:160,25,0	1/1:6,14:20:35.56:246,36,0	0/1:12,5:15:25.24:25,0,63	0/1:8,1:12:4.40:4,0,145	0/0:17,1:19:21.21:0,21,314	0/0:12,1:13:0.43:0,0,141	1/1:7,9:17:28.74:191,29,0	1/1:3,12:15:29.43:205,29,0	1/1:4,7:10:17.80:123,18,0
chr10	86372059	.	TAC	T	375.66	PASS	AB=0.944;AC=14;AF=0.259;AN=54;BaseQRankSum=1.465;DP=558;FS=19.374;HRun=0;HaplotypeScore=101.6599;InbreedingCoeff=-0.0910;MQ=65.32;MQ0=3;MQRankSum=0.267;QD=1.41;ReadPosRankSum=2.780;VQSLOD=-0.0394;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:31.82:32,0,40	1/1:11,0:10:2.99:24,3,0	0/0:33,0:23:5.38:0,5,52	0/0:22,0:17:2.44:0,2,35	0/1:24,0:25:6.39:6,0,321	0/0:14,0:14:20.76:0,21,156	0/1:19,6:25:63.55:64,0,186	./.	0/0:26,0:26:30.92:0,31,465	0/1:23,0:23:39.13:116,0,39	0/1:13,0:13:9.28:17,0,9	0/1:27,0:27:20.75:21,0,330	0/0:11,0:11:1.11:0,1,185	0/1:30,0:30:19.89:20,0,454	0/0:15,0:15:4.26:0,4,184	0/0:16,0:16:10.60:0,11,357	1/1:26,0:26:10.77:111,11,0	0/0:21,0:21:1.67:0,2,256	0/0:10,0:10:4.98:0,5,25	0/0:11,0:12:0:0,0,0	0/0:21,0:21:0:0,0,0	0/0:19,0:19:23.01:0,23,197	0/0:17,0:17:17.94:0,18,181	0/0:33,0:33:47.92:0,48,484	0/1:17,1:17:13.13:13,0,232	0/1:13,0:19:36.77:78,0,37	0/1:22,0:24:14.48:14,0,64	0/0:4,0:4:2.37:0,2,8
chr10	86372075	.	C	CAG	205.28	PASS	AB=0.911;AC=11;AF=0.196;AN=56;BaseQRankSum=7.071;DP=615;FS=10.452;HRun=0;HaplotypeScore=125.1900;InbreedingCoeff=0.4165;MQ=50.37;MQ0=8;MQRankSum=-5.099;QD=1.82;ReadPosRankSum=-2.067;VQSLOD=1.4773;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:55.87:0,56,453	0/0:14,0:12:11.49:0,11,105	0/0:21,0:6:11.89:0,12,125	0/0:24,0:13:23.51:0,24,231	0/0:31,0:31:47.06:0,47,672	0/0:22,0:22:44.98:0,45,444	0/0:26,0:26:50.93:0,51,539	0/1:18,0:16:45.69:46,0,127	0/0:27,0:27:65.92:0,66,778	0/0:30,0:30:84.89:0,85,682	0/1:24,0:24:7.16:7,0,67	0/0:34,0:34:75.92:0,76,832	0/0:15,0:15:41.60:0,42,415	0/0:30,0:30:81.09:0,81,959	0/0:14,0:14:33.50:0,33,392	0/0:24,0:24:66:0,66,741	0/0:30,0:30:49.38:0,49,406	0/0:24,0:24:37.14:0,37,370	1/1:3,0:3:2.97:29,3,0	0/1:8,0:8:0:0,0,0	1/1:16,0:16:6.03:49,6,0	0/0:23,0:22:50.94:0,51,504	0/0:21,0:21:39.03:0,39,436	0/0:37,0:36:93.04:0,93,1030	0/0:26,0:25:52.85:0,53,634	0/1:19,0:19:48.11:48,0,60	1/1:19,1:19:8.52:128,9,0	0/1:1,4:5:13.92:39,0,14
chr10	86372087	.	C	CAGAGAGAGAG	2734.59	PASS	AB=0.926;AC=18;AF=0.321;AN=56;BaseQRankSum=8.516;DP=605;FS=0.476;HRun=0;HaplotypeScore=182.2356;InbreedingCoeff=0.4537;MQ=56.81;MQ0=9;MQRankSum=-4.767;QD=12.66;ReadPosRankSum=-2.952;VQSLOD=1.5075;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:24:99:112,0,101	1/1:5,4:11:2.62:49,3,0	0/0:21,0:7:14.13:0,14,287	0/1:34,0:18:3.47:3,0,284	0/0:28,0:28:17.88:0,18,1602	0/0:23,0:23:51.15:0,51,1196	0/0:24,0:24:19.55:0,20,1020	0/1:17,0:15:99:214,0,183	0/0:27,0:27:60.12:0,60,1690	0/1:14,7:29:47.87:727,0,48	0/0:6,1:23:2.71:0,3,14	0/0:33,0:33:29.23:0,29,1640	0/0:17,0:17:45.51:0,46,1057	0/0:27,0:27:46.86:0,47,1792	0/0:16,0:16:36.55:0,37,731	0/0:23,0:23:57.19:0,57,1621	1/1:22,1:23:12.96:231,13,0	0/0:24,0:24:31.79:0,32,667	1/1:9,0:6:5.87:313,6,0	1/1:12,0:12:5.62:172,6,0	0/1:14,0:15:0.25:0,0,1	0/0:22,0:21:51.17:0,51,1344	0/0:22,0:22:45.13:0,45,1124	0/0:34,0:33:87.12:0,87,2106	0/0:25,0:24:50.73:0,51,1166	0/1:17,0:17:8.41:443,0,8	1/1:19,0:18:31.21:600,31,0	1/1:4,0:4:3.01:39,3,0
chr10	86372089	.	C	CAG	1658.63	PASS	AB=0.879;AC=27;AF=0.482;AN=56;BaseQRankSum=10.734;DP=641;FS=1.724;HRun=0;HaplotypeScore=130.6032;InbreedingCoeff=0.6720;MQ=55.49;MQ0=11;MQRankSum=-6.783;QD=5.35;ReadPosRankSum=-4.423;VQSLOD=1.8513;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:35.29:388,35,0	1/1:12,0:10:2.68:11,3,0	0/1:23,0:6:8.04:8,0,54	0/0:36,0:19:0.86:0,1,80	0/0:29,0:29:25.03:0,25,373	0/1:24,0:24:10.02:10,0,200	0/0:24,0:24:26.97:0,27,238	1/1:29,0:25:29.97:208,30,0	0/0:27,0:27:48.01:0,48,465	1/1:28,0:28:34.54:278,35,0	1/1:22,0:22:11.72:79,12,0	0/0:33,0:33:44.69:0,45,366	0/0:17,0:17:29.95:0,30,257	0/0:26,0:26:48.03:0,48,470	0/0:16,0:16:17.79:0,18,144	0/0:23,0:23:41.88:0,42,390	1/1:15,1:26:5.79:39,6,0	0/1:9,12:21:59.22:167,0,59	1/1:17,0:14:34.42:230,34,0	1/1:13,0:13:9.45:74,9,0	1/1:19,0:19:6.44:50,6,0	0/0:22,0:21:22.91:0,23,239	0/0:22,0:22:32.92:0,33,261	0/0:31,0:30:56.95:0,57,505	0/0:25,0:24:25.62:0,26,222	1/1:20,0:20:17.23:135,17,0	1/1:25,0:24:11.73:142,12,0	1/1:4,0:4:3.01:45,3,0
chr10	86372907	.	AGT	A	4553.84	PASS	AB=0.611;AC=48;AF=0.889;AN=54;BaseQRankSum=2.583;DP=636;FS=0.000;HRun=0;HaplotypeScore=116.7157;InbreedingCoeff=0.4497;MQ=61.92;MQ0=9;MQRankSum=0.009;QD=7.78;ReadPosRankSum=1.473;VQSLOD=4.5932;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:45:31.25:154,31,0	1/1:2,0:7:2.84:14,3,0	./.	0/0:17,0:13:3.01:0,3,45	0/1:9,14:23:12.90:271,0,13	1/1:3,11:15:17.88:182,18,0	1/1:8,16:25:32.76:349,33,0	1/1:26,0:35:11.54:50,12,0	1/1:10,12:21:15.04:168,15,0	1/1:18,0:33:34.89:168,35,0	1/1:10,0:18:17.04:84,17,0	1/1:9,14:25:26.91:282,27,0	1/1:9,12:21:24.07:268,24,0	1/1:6,11:17:23.94:268,24,0	0/1:6,11:17:15.61:252,0,16	1/1:7,6:12:8.72:100,9,0	1/1:16,0:34:28.41:140,28,0	0/0:9,0:19:15.02:0,15,167	1/1:12,0:18:17.04:84,17,0	1/1:8,0:22:19.64:94,20,0	1/1:24,0:37:8.52:42,9,0	1/1:7,4:12:14.87:148,15,0	1/1:10,13:24:26.91:282,27,0	1/1:7,19:26:41.81:469,42,0	1/1:8,13:22:32.93:349,33,0	1/1:12,0:27:36.93:182,37,0	1/1:12,0:25:16.91:84,17,0	1/1:6,0:15:14.68:71,15,0
chr10	86374375	.	A	AG	693.26	PASS	AB=0.827;AC=11;AF=0.196;AN=56;BaseQRankSum=-4.940;DP=528;FS=8.682;HRun=0;HaplotypeScore=54.2943;InbreedingCoeff=-0.0752;MQ=37.43;MQ0=64;MQRankSum=5.467;QD=3.40;ReadPosRankSum=-2.651;VQSLOD=0.9150;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:11:33.59:61,0,34	1/1:7,0:5:8.94:69,9,0	0/0:41,0:6:8.59:0,9,52	0/0:45,0:10:4.76:0,5,75	0/0:20,0:20:51.28:0,51,359	0/0:23,0:23:59.06:0,59,389	0/0:17,0:17:42.83:0,43,271	0/1:21,0:18:68.47:168,0,68	0/0:7,0:6:14.49:0,14,97	0/1:17,12:22:75.09:178,0,75	0/1:9,0:17:39.11:39,0,59	0/0:15,0:12:28.26:0,28,195	0/0:13,0:12:34.33:0,34,245	0/0:12,0:8:23.62:0,24,160	0/0:20,0:17:41.51:0,42,293	0/0:12,0:12:33.55:0,34,235	0/1:18,0:29:23.42:23,0,59	0/0:14,6:18:23.36:0,23,156	0/1:16,9:20:95.27:139,0,95	0/1:20,1:20:38.41:38,0,141	0/0:3,0:2:5.42:0,5,27	0/0:9,0:6:13.14:0,13,85	0/0:17,0:15:34.11:0,34,229	0/0:22,0:14:35.62:0,36,244	0/0:16,0:16:44.47:0,44,316	0/1:17,5:18:59.07:59,0,137	0/1:10,0:7:34.77:68,0,35	0/0:9,0:5:5.82:0,6,35
chr10	86374996	.	T	TAAGGGGC	5821.17	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=-3.119;DP=585;FS=5.842;HRun=0;HaplotypeScore=133.3790;InbreedingCoeff=0.9216;MQ=84.33;MQ0=0;MQRankSum=-9.926;QD=34.04;ReadPosRankSum=-2.260;VQSLOD=4.0713;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,111,2443	./.	0/0:24,0:25:3.22:0,3,454	0/0:31,0:31:62.96:0,63,1160	0/0:17,0:17:36.12:0,36,840	0/0:26,0:26:63.22:0,63,1421	0/0:27,0:27:54.19:0,54,1196	1/1:18,0:18:27.09:858,27,0	0/0:13,0:13:24.08:0,24,542	1/1:11,11:22:33.11:1165,33,0	1/1:3,2:6:5.98:132,6,0	0/0:27,0:27:63.18:0,63,1322	0/0:24,0:24:54.17:0,54,1219	0/0:12,0:12:24.08:0,24,562	0/0:21,0:21:39.12:0,39,849	0/0:29,0:29:69.24:0,69,1595	1/1:18,6:24:9.03:336,9,0	0/0:30,0:30:66.23:0,66,1546	1/1:13,2:15:11.82:378,12,0	1/1:7,7:14:21.03:578,21,0	1/1:25,3:35:15.05:518,15,0	0/0:28,0:28:45.14:0,45,989	0/0:9,0:9:9.03:0,9,211	0/0:35,0:36:78.27:0,78,1751	0/0:10,0:10:21.07:0,21,491	1/1:12,7:20:27.07:739,27,0	1/1:5,7:12:21.07:782,21,0	1/1:2,3:5:9.03:336,9,0
chr10	86375553	.	ACC	A	5562.87	PASS	AB=0.941;AC=23;AF=0.411;AN=56;BaseQRankSum=8.248;DP=493;FS=6.657;HRun=10;HaplotypeScore=84.1578;InbreedingCoeff=0.9118;MQ=66.55;MQ0=1;MQRankSum=-0.334;QD=21.82;ReadPosRankSum=4.315;VQSLOD=4.0807;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:14.83:0,15,114	1/1:1,9:10:24.06:267,24,0	0/1:15,0:13:9.85:10,0,185	0/0:10,0:10:14.33:0,14,112	0/0:19,0:20:21.63:0,22,321	0/0:10,0:14:27.51:0,28,371	0/0:21,0:25:58.06:0,58,629	1/1:7,30:37:74.96:798,75,0	0/0:9,0:9:12.01:0,12,145	1/1:3,10:12:24.05:267,24,0	1/1:3,15:18:26.73:301,27,0	0/0:17,0:20:46.57:0,47,541	0/0:9,0:11:19.92:0,20,249	0/0:20,0:20:39.07:0,39,499	0/0:14,0:17:35.05:0,35,449	0/0:14,0:14:24.07:0,24,357	1/1:2,27:29:51.13:568,51,0	0/0:18,0:20:46.13:0,46,586	1/1:1,21:23:66.15:720,66,0	1/1:3,22:25:57.13:628,57,0	1/1:4,29:35:53.55:555,54,0	0/0:7,0:11:25.01:0,25,228	0/0:10,0:11:20.43:0,20,285	0/0:16,0:19:35.80:0,36,405	0/0:6,0:6:12.01:0,12,146	1/1:0,20:20:57.58:613,58,0	1/1:1,23:24:63.15:702,63,0	1/1:1,4:5:12.03:134,12,0
chr10	86379933	.	T	TG	2016.06	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-9.186;DP=458;FS=0.571;HRun=0;HaplotypeScore=44.1212;InbreedingCoeff=0.8372;MQ=74.39;MQ0=0;MQRankSum=-1.265;QD=40.32;ReadPosRankSum=3.019;VQSLOD=3.8018;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,50:50:99:2111,138,0	0/0:8,0:8:24.08:0,24,335	0/0:12,0:12:12.54:0,13,160	0/0:5,0:5:5.61:0,6,51	0/0:17,0:17:48.08:0,48,585	0/0:16,0:16:48.11:0,48,618	0/0:26,0:26:78.23:0,78,1055	0/0:10,0:10:26.96:0,27,304	0/0:19,0:19:57.16:0,57,742	0/0:25,0:25:69.22:0,69,935	0/0:6,0:6:18.04:0,18,209	0/0:12,0:12:36.11:0,36,484	0/0:14,0:14:42.07:0,42,515	0/0:22,0:22:60.13:0,60,805	0/0:15,0:15:45.14:0,45,614	0/0:8,0:8:21.07:0,21,294	0/0:27,0:27:78.24:0,78,1070	0/0:25,0:25:75.22:0,75,1012	0/0:14,0:14:39.12:0,39,530	0/0:8,0:8:21.05:0,21,261	0/0:19,0:19:54.15:0,54,702	0/0:19,0:19:57.17:0,57,757	0/0:8,0:8:24.08:0,24,335	0/0:12,0:12:36.12:0,36,502	0/0:11,0:11:33.11:0,33,461	0/0:24,0:24:69.10:0,69,895	0/0:22,0:22:63.20:0,63,863	0/0:4,0:4:12.04:0,12,168
chr10	86381367	.	CTG	C	468.33	PASS	AB=1.000;AC=10;AF=0.192;AN=52;BaseQRankSum=8.575;DP=594;FS=5.590;HRun=0;HaplotypeScore=102.7426;InbreedingCoeff=0.4010;MQ=48.12;MQ0=34;MQRankSum=-0.849;QD=2.84;ReadPosRankSum=-2.597;VQSLOD=1.4467;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:31:21.39:142,21,0	1/1:8,0:6:8.97:71,9,0	./.	./.	0/0:32,0:30:69.05:0,69,1126	0/0:24,0:22:51.17:0,51,934	0/0:28,0:19:36.12:0,36,673	0/1:42,0:34:39.06:39,0,1003	0/0:14,0:13:30.09:0,30,510	0/1:25,0:23:53.96:205,0,54	1/1:9,0:8:2.94:25,3,0	0/0:21,0:21:54.18:0,54,974	0/0:14,0:14:42.14:0,42,719	0/0:14,0:13:33.11:0,33,595	0/0:24,0:24:47.97:0,48,919	0/0:16,0:15:33.11:0,33,609	0/1:14,0:14:42.82:115,0,43	0/1:31,0:31:18.76:19,0,233	0/0:20,0:18:19.08:0,19,632	0/0:16,8:23:30.57:0,31,496	0/0:33,3:33:63.17:0,63,1143	0/0:19,0:16:33.10:0,33,559	0/0:18,0:16:36.12:0,36,663	0/0:51,0:48:99:0,141,2534	0/0:15,0:15:33.06:0,33,603	0/0:30,0:25:62.30:0,62,984	0/0:17,2:18:38.57:0,39,590	0/0:4,0:2:3.01:0,3,36
chr10	86381371	.	CTG	C	1177.29	PASS	AB=1.000;AC=12;AF=0.231;AN=52;BaseQRankSum=9.494;DP=598;FS=2.906;HRun=0;HaplotypeScore=103.2309;InbreedingCoeff=0.4475;MQ=48.10;MQ0=34;MQRankSum=0.504;QD=6.30;ReadPosRankSum=-4.217;VQSLOD=2.3199;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:31:18.05:118,18,0	1/1:8,0:6:8.99:74,9,0	./.	./.	0/0:33,0:30:42.53:0,43,639	0/0:26,0:24:57.05:0,57,700	0/0:32,0:23:24.98:0,25,398	0/1:43,0:36:99:129,0,333	0/0:14,0:13:27:0,27,349	0/1:24,0:22:23.42:184,0,23	1/1:9,0:8:2.94:25,3,0	0/0:21,0:21:47.89:0,48,681	0/0:14,0:14:33.06:0,33,439	0/0:14,0:13:30:0,30,344	0/0:24,0:24:50.66:0,51,635	0/0:17,0:16:33.33:0,33,368	0/1:14,0:14:15.16:121,0,15	1/1:22,10:32:63.30:675,63,0	0/1:21,0:19:10.05:10,0,199	0/0:26,0:25:1.03:0,1,194	0/0:35,0:33:60.21:0,60,558	0/0:17,0:14:26.65:0,27,374	0/0:18,0:16:33.03:0,33,397	0/0:50,0:47:99:0,131,1920	0/0:14,0:14:10.89:0,11,343	0/0:30,0:25:52.07:0,52,553	0/0:17,0:16:30.51:0,31,222	0/0:5,0:3:3:0,3,26
chr10	86381396	.	TCA	T	425.33	PASS	AB=0.973;AC=13;AF=0.241;AN=54;BaseQRankSum=4.416;DP=597;FS=7.407;HRun=0;HaplotypeScore=102.0100;InbreedingCoeff=0.3739;MQ=51.04;MQ0=21;MQRankSum=1.299;QD=2.44;ReadPosRankSum=-1.992;VQSLOD=1.2124;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:32:23.84:174,24,0	1/1:6,0:4:5.96:44,6,0	0/0:13,0:6:9.80:0,10,65	./.	0/0:25,0:24:35.83:0,36,454	0/0:22,0:22:42.05:0,42,535	0/0:33,0:26:15.30:0,15,368	0/0:24,0:24:18.40:0,18,153	0/0:19,0:18:32.94:0,33,352	0/1:21,0:22:18.67:52,0,19	1/1:12,0:13:14.60:102,15,0	0/0:22,0:22:42.08:0,42,555	0/0:16,0:16:35.98:0,36,382	0/0:13,0:13:32.82:0,33,338	0/0:19,4:23:1.10:0,1,365	0/1:18,2:19:99:148,0,219	1/1:8,0:8:5.49:37,5,0	0/0:38,0:41:81.28:0,81,623	0/0:15,0:14:18.75:0,19,133	0/0:28,0:27:16.78:0,17,176	0/1:28,0:26:3.50:4,0,150	0/0:19,0:18:20.94:0,21,285	0/0:19,0:17:2.23:0,2,215	0/0:56,0:53:99:0,114,1389	0/0:12,0:13:7.04:0,7,133	0/1:28,0:26:14.48:14,0,183	0/1:15,0:14:6.64:7,0,103	0/0:11,0:10:5.20:0,5,29
chr10	86381495	.	G	GTTT	2303.56	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=8.146;DP=559;FS=0.996;HRun=8;HaplotypeScore=109.0479;InbreedingCoeff=0.6840;MQ=57.44;MQ0=23;MQRankSum=-5.141;QD=7.45;ReadPosRankSum=-1.333;VQSLOD=-0.6400;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:31:4.48:72,4,0	1/1:3,5:8:5.75:74,6,0	0/1:28,0:11:1.69:2,0,34	0/0:27,0:10:4.13:0,4,54	0/0:22,0:22:43.15:0,43,528	0/0:17,0:16:34.53:0,35,457	0/0:15,0:14:33.77:0,34,402	1/1:31,1:29:31.64:273,32,0	0/0:16,0:15:28.60:0,29,277	1/1:9,23:30:65.88:1037,66,0	1/1:14,4:17:38.01:489,38,0	0/0:16,0:16:38.01:0,38,400	0/0:17,0:17:36.85:0,37,403	0/0:9,0:8:10.66:0,11,89	0/0:14,0:12:8.47:0,8,95	0/0:17,0:17:36.93:0,37,330	1/1:13,3:16:17.48:232,17,0	0/1:27,0:26:33.92:34,0,272	1/1:32,0:28:14.73:125,15,0	1/1:16,0:16:1.99:29,2,0	1/1:12,0:9:3.02:22,3,0	0/0:16,0:16:34.96:0,35,388	0/0:15,0:15:29.88:0,30,341	0/0:25,0:24:31.99:0,32,410	0/0:24,0:23:38.95:0,39,463	1/1:30,0:27:0.87:42,1,0	1/1:17,0:15:4.16:44,4,0	1/1:7,0:6:4.22:24,4,0
chr10	86381504	.	T	TG	595.03	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=5.699;DP=557;FS=14.159;HRun=0;HaplotypeScore=90.1325;InbreedingCoeff=0.7858;MQ=47.73;MQ0=27;MQRankSum=-3.731;QD=7.93;ReadPosRankSum=4.064;VQSLOD=2.8298;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:63.38:0,63,359	0/1:8,0:8:3.68:18,0,4	0/0:32,0:7:8.95:0,9,68	0/0:25,0:6:0.16:0,0,40	0/0:22,0:22:53.34:0,53,443	0/0:19,0:18:50.72:0,51,433	0/0:16,0:15:40.70:0,41,301	0/0:28,0:24:40.41:0,40,361	0/0:15,0:14:35.67:0,36,280	1/1:31,2:30:33.34:416,33,0	1/1:11,3:14:13.80:192,14,0	0/0:17,0:16:47.82:0,48,400	0/0:16,0:16:38.83:0,39,317	0/0:12,0:10:26.45:0,26,174	0/0:17,0:15:40.36:0,40,287	0/0:16,0:16:47.87:0,48,405	1/1:6,13:19:15.98:112,16,0	0/0:25,0:24:53.65:0,54,330	0/0:27,0:23:59.43:0,59,469	0/0:17,0:16:38.15:0,38,257	0/0:11,0:8:11.47:0,11,107	0/0:17,0:17:44.66:0,45,368	0/0:15,0:15:35.65:0,36,264	0/0:27,0:26:48.06:0,48,417	0/0:20,0:19:35.93:0,36,311	0/0:32,0:29:59.10:0,59,412	0/0:15,0:13:29.10:0,29,193	0/0:10,0:9:15.98:0,16,89
chr10	86382650	.	ATG	A	46.42	PASS	AB=0.948;AC=17;AF=0.327;AN=52;BaseQRankSum=4.692;DP=559;FS=0.000;HRun=0;HaplotypeScore=84.7836;InbreedingCoeff=-0.0724;MQ=59.51;MQ0=5;MQRankSum=-0.804;QD=0.17;ReadPosRankSum=0.097;VQSLOD=1.3192;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:11.97:0,12,110	0/1:8,0:8:8.49:8,0,15	0/0:23,0:13:2.94:0,3,18	./.	0/1:16,5:21:9.32:9,0,270	0/0:23,0:23:18.54:0,19,290	0/1:25,0:25:6.09:6,0,244	0/0:30,0:30:9.14:0,9,61	0/1:20,0:21:20.20:20,0,254	1/1:17,0:17:1.27:8,1,0	./.	0/0:22,0:22:23.98:0,24,299	0/0:15,0:15:19.46:0,19,182	0/1:19,2:21:11.78:12,0,282	0/1:15,1:16:3.81:4,0,327	0/0:21,0:21:20.78:0,21,391	0/1:35,0:35:21.28:21,0,33	0/0:16,0:24:11.98:0,12,105	0/1:16,0:14:4.62:5,0,32	1/1:6,0:6:2.80:13,3,0	0/0:37,0:34:8.97:0,9,71	0/1:16,1:17:6.47:6,0,269	0/0:11,0:11:18.63:0,19,302	0/1:46,2:47:34.35:34,0,612	0/1:9,1:10:24.33:24,0,69	0/0:19,0:19:8.61:0,9,59	1/1:14,0:14:2.80:13,3,0	0/0:3,0:3:0.47:0,0,1
chr10	86382678	.	GTGTGTGTGTA	G	1573.57	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=-3.615;DP=594;FS=1.489;HRun=0;HaplotypeScore=161.2344;InbreedingCoeff=0.4818;MQ=51.71;MQ0=13;MQRankSum=-1.159;QD=6.03;ReadPosRankSum=-7.359;VQSLOD=0.4096;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:91.16:91,0,838	0/1:10,0:10:32.75:48,0,33	0/1:32,0:12:0.25:0,0,104	0/0:47,0:13:4.91:0,5,173	0/0:18,0:18:27.07:0,27,970	0/0:23,0:23:27.77:0,28,1213	0/0:24,0:24:27.07:0,27,1016	1/1:25,0:25:45.57:331,46,0	0/0:21,0:21:41.61:0,42,1344	0/1:20,0:20:99:134,0,155	0/1:8,0:8:11.93:12,0,141	0/0:15,0:15:27.05:0,27,890	0/0:17,0:17:38.22:0,38,1002	0/0:21,0:21:39.07:0,39,1104	0/0:15,0:15:24.13:0,24,1438	0/0:19,0:19:23.80:0,24,1431	0/1:41,0:41:99:103,0,405	0/0:19,0:19:29.92:0,30,612	1/1:14,0:12:20.75:207,21,0	1/1:8,1:9:8.66:140,9,0	1/1:37,0:34:29.02:227,29,0	0/0:14,0:14:33.08:0,33,1120	0/0:15,0:15:42.07:0,42,1248	0/0:53,0:52:99:0,105,2973	0/0:12,0:12:4.08:0,4,472	1/1:18,0:18:37.81:313,38,0	1/1:3,8:11:3:94,3,0	1/1:4,0:4:8.91:63,9,0
chr10	86383001	.	C	CTT	2273.92	PASS	AB=0.731;AC=21;AF=0.375;AN=56;BaseQRankSum=-0.265;DP=339;FS=0.000;HRun=14;HaplotypeScore=56.3434;InbreedingCoeff=0.7676;MQ=70.70;MQ0=7;MQRankSum=-4.983;QD=17.23;ReadPosRankSum=-1.992;VQSLOD=1.9964;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:23.56:0,24,275	1/1:3,0:3:6.01:67,6,0	0/0:29,0:12:10.96:0,11,70	0/0:18,0:11:9.42:0,9,75	0/0:14,0:17:0.64:0,1,219	0/0:14,0:16:29.37:0,29,223	0/0:9,0:9:17.68:0,18,136	1/1:11,10:22:36.39:394,36,0	0/0:8,0:8:14.31:0,14,106	1/1:11,6:19:19.10:378,19,0	1/1:0,8:8:17.42:205,17,0	0/0:9,0:10:24.35:0,24,187	0/0:6,0:6:11.89:0,12,100	0/0:5,0:5:14.48:0,14,95	0/0:9,0:8:14.46:0,14,108	0/0:7,0:7:13.96:0,14,113	0/1:12,5:19:18.31:274,0,18	0/0:10,0:8:2.75:0,3,103	1/1:4,4:8:23.81:261,24,0	1/1:5,4:9:12.04:154,12,0	1/1:0,0:2:3.01:31,3,0	0/0:5,0:5:11.98:0,12,100	0/0:14,0:14:27.77:0,28,215	0/0:6,0:5:11.96:0,12,99	0/0:11,0:11:8.36:0,8,204	1/1:1,11:13:27.41:293,27,0	1/1:3,13:19:28.26:245,28,0	1/1:2,3:7:17.97:176,18,0
chr10	86385062	.	CT	C	249.30	PASS	AB=0.500;AC=7;AF=0.350;AN=20;BaseQRankSum=0.254;DP=47;FS=0.000;HRun=1;HaplotypeScore=71.3287;InbreedingCoeff=0.4350;MQ=26.58;MQ0=4;MQRankSum=0.930;QD=15.58;ReadPosRankSum=1.268;VQSLOD=3.5144;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/0:0,5:5:2.29:0,2,6	1/1:0,4:4:5.89:79,6,0	0/0:0,2:2:0.47:0,0,1	./.	./.	1/1:0,3:3:9.03:117,9,0	0/0:0,3:3:0.88:0,1,2	./.	0/1:0,4:4:0.02:1,0,0	./.	0/0:0,2:2:0.47:0,0,1	./.	./.	./.	./.	./.	./.	0/0:0,1:1:0:0,0,0	0/0:0,2:2:0:0,0,0	./.	./.	./.	1/1:0,5:5:11.06:127,11,0	./.
chr10	86385080	.	GT	G	607.01	PASS	AC=32;AF=1.000;AN=32;BaseQRankSum=-1.040;DP=53;FS=0.000;HRun=1;HaplotypeScore=74.2481;InbreedingCoeff=0.0169;MQ=30.10;MQ0=2;MQRankSum=-1.386;QD=13.49;ReadPosRankSum=-1.559;VQSLOD=1.8857;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:5,0:5:14.29:76,14,0	1/1:4,0:4:11.80:76,12,0	1/1:1,0:1:2.97:20,3,0	./.	1/1:2,0:2:5.88:37,6,0	1/1:2,0:2:5.93:40,6,0	1/1:3,0:3:5.14:25,5,0	1/1:1,0:1:2.98:21,3,0	1/1:4,0:4:6.55:44,7,0	./.	1/1:4,0:4:8.81:55,9,0	1/1:2,0:2:2.92:17,3,0	./.	./.	./.	1/1:1,0:1:1.55:4,2,0	./.	1/1:2,0:2:2.84:14,3,0	1/1:3,0:3:5.92:39,6,0	./.	1/1:1,0:1:2.99:23,3,0	1/1:1,4:5:14.86:106,15,0	1/1:5,0:5:14.55:85,15,0	./.
chr10	86385110	.	G	GAA	1006.35	PASS	AB=0.865;AC=15;AF=0.268;AN=56;BaseQRankSum=10.869;DP=448;FS=32.250;HRun=0;HaplotypeScore=107.1357;InbreedingCoeff=-0.3676;MQ=40.87;MQ0=5;MQRankSum=-8.117;QD=4.12;ReadPosRankSum=5.143;VQSLOD=0.9325;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:20.18:0,20,326	0/0:8,0:8:24.08:0,24,369	0/0:28,0:8:14.95:0,15,232	0/0:17,0:4:11.63:0,12,140	0/1:18,3:21:81.39:81,0,633	0/1:13,2:15:71.76:72,0,439	0/0:10,0:9:27.09:0,27,419	0/0:25,0:23:66.18:0,66,935	0/1:17,2:19:27.34:27,0,693	0/0:21,1:22:24.74:0,25,924	0/1:13,3:16:97:97,0,446	0/1:16,1:18:34.36:34,0,564	0/1:16,5:21:99:157,0,492	0/1:8,1:9:18.94:19,0,322	0/1:15,5:20:99:142,0,597	0/1:17,4:21:99:115,0,567	0/0:10,0:10:24.04:0,24,347	0/0:8,0:8:24.01:0,24,353	0/0:15,0:14:33.07:0,33,489	0/1:10,1:11:28.39:28,0,348	0/0:18,0:16:32.14:0,32,613	0/1:10,0:10:11.87:12,0,318	0/1:8,4:12:99:134,0,296	0/0:17,0:17:37.27:0,37,557	0/1:13,4:17:99:109,0,395	0/1:16,1:16:33.21:33,0,510	0/1:13,4:17:99:103,0,461	0/0:9,0:8:21.04:0,21,288
chr10	86385319	.	T	TAA	7108.71	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-9.679;DP=541;FS=9.688;HRun=10;HaplotypeScore=70.1005;InbreedingCoeff=0.9908;MQ=57.70;MQ0=1;MQRankSum=-0.450;QD=28.43;ReadPosRankSum=-2.572;VQSLOD=3.6263;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:15.31:0,15,246	1/1:1,11:13:21.07:312,21,0	0/0:10,0:6:14.96:0,15,136	0/0:9,0:7:15.40:0,15,140	0/0:21,0:21:32.96:0,33,335	0/0:17,0:17:42.04:0,42,419	0/0:10,0:12:32.53:0,33,298	1/1:7,17:24:51.10:667,51,0	0/0:22,0:23:59.86:0,60,592	1/1:5,27:32:32.69:864,33,0	1/1:2,14:18:41.58:547,42,0	0/0:10,0:10:27.06:0,27,275	0/0:14,0:14:33.05:0,33,336	0/0:15,0:15:39.02:0,39,385	0/0:19,0:21:41.77:0,42,473	0/0:12,0:12:36.08:0,36,366	1/1:5,32:38:60.48:1017,60,0	0/0:26,0:26:75.13:0,75,754	1/1:5,8:15:29.54:341,30,0	1/1:3,13:20:32.60:455,33,0	1/1:1,10:12:18.06:268,18,0	0/0:9,0:9:27.06:0,27,275	0/0:14,0:14:24.02:0,24,243	0/0:19,0:19:53.47:0,53,520	0/0:26,0:27:47.99:0,48,538	1/1:4,20:23:57.17:825,57,0	1/1:4,24:30:75.24:1087,75,0	1/1:2,20:23:50.66:725,51,0
chr10	86385715	.	TG	T	559.03	PASS	AB=0.943;AC=4;AF=0.074;AN=54;BaseQRankSum=6.916;DP=834;FS=6.775;HRun=2;HaplotypeScore=136.2691;InbreedingCoeff=0.4921;MQ=52.75;MQ0=20;MQRankSum=-3.658;QD=10.35;ReadPosRankSum=-1.861;VQSLOD=0.8601;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:48.16:623,48,0	0/0:7,0:7:11.95:0,12,92	0/0:55,0:29:71.99:0,72,973	0/0:64,0:33:73.90:0,74,1067	0/0:29,0:29:69.23:0,69,1033	0/0:21,0:21:63.21:0,63,944	0/0:52,0:52:99:0,153,2232	./.	0/0:53,0:53:99:0,157,2315	0/0:13,0:10:17.93:0,18,154	0/1:5,0:5:0:0,0,0	0/0:47,0:47:99:0,138,2005	0/0:49,0:49:99:0,144,2134	0/0:54,0:54:99:0,163,2391	0/0:65,0:65:99:0,190,2812	0/0:51,0:51:99:0,153,2212	0/0:13,0:13:24.33:0,24,237	0/1:27,4:31:40.89:41,0,1121	0/0:7,0:3:5.98:0,6,49	0/0:7,0:6:3.01:0,3,31	0/0:18,0:13:5.64:0,6,41	0/0:33,0:33:89.96:0,90,1327	0/0:13,0:13:36.10:0,36,518	0/0:68,1:68:99:0,187,2701	0/0:21,0:21:63.21:0,63,942	0/0:16,0:15:10.73:0,11,69	0/0:11,0:11:18:0,18,163	0/0:7,0:7:15:0,15,134
chr10	86385722	.	AATGGTGGTGATG	A	446.75	PASS	AB=1.000;AC=13;AF=0.260;AN=50;BaseQRankSum=8.658;DP=826;FS=3.401;HRun=0;HaplotypeScore=276.7809;InbreedingCoeff=0.6053;MQ=50.78;MQ0=42;MQRankSum=-3.203;QD=4.96;ReadPosRankSum=-5.368;VQSLOD=1.4855;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:32.78:0,33,592	0/1:6,0:6:2.95:17,0,3	0/0:54,0:25:69.26:0,69,1803	0/0:61,0:28:57.68:0,58,1616	0/0:26,0:24:63.22:0,63,3191	0/0:20,0:19:57.20:0,57,2876	0/0:52,0:49:99:0,147,6788	./.	0/0:53,0:53:99:0,147,8205	1/1:2,11:9:20.32:202,20,0	./.	0/0:50,0:45:99:0,120,6023	0/0:49,0:48:99:0,138,6703	0/0:54,0:53:99:0,160,7635	0/0:63,0:63:99:0,180,9141	0/0:55,0:55:99:0,141,7362	0/1:15,0:14:42.48:120,0,42	0/0:31,0:30:87.77:0,88,4160	./.	1/1:2,0:1:2.68:11,3,0	1/1:22,0:14:2.74:22,3,0	0/0:34,0:33:90.31:0,90,4135	0/0:14,0:11:30.10:0,30,1310	0/0:68,0:63:99:0,175,8741	0/0:25,0:21:63.21:0,63,2764	1/1:17,0:15:16.17:139,16,0	0/1:9,0:9:27.43:37,0,27	1/1:6,0:6:4.11:54,4,0
chr10	86386673	.	TA	T	2260.40	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=5.896;DP=396;FS=0.929;HRun=10;HaplotypeScore=40.9177;InbreedingCoeff=0.9021;MQ=53.97;MQ0=4;MQRankSum=-0.859;QD=16.50;ReadPosRankSum=0.810;VQSLOD=3.4395;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:23:45.45:0,45,227	0/0:3,0:3:9.02:0,9,100	0/0:1,0:1:3.01:0,3,33	0/0:5,0:2:3.01:0,3,33	0/0:15,0:15:36.09:0,36,391	0/0:18,1:19:25.10:0,25,497	0/0:8,0:9:16.76:0,17,203	1/1:18,15:27:30.37:368,30,0	0/0:20,0:18:51.14:0,51,564	0/0:19,0:19:39.10:0,39,424	0/0:11,0:11:24.04:0,24,249	0/0:10,0:10:18.05:0,18,198	0/0:7,0:7:18.02:0,18,186	0/0:7,0:7:18.05:0,18,199	0/0:21,0:20:54.08:0,54,567	0/0:16,0:16:36.10:0,36,398	0/0:17,0:17:42.09:0,42,449	0/0:22,0:22:48.05:0,48,497	1/1:5,17:20:35.07:397,35,0	1/1:3,9:12:26.99:234,27,0	1/1:2,11:12:32.99:286,33,0	./.	0/0:6,0:6:12:0,12,121	0/0:10,0:10:17.96:0,18,174	0/0:17,0:17:51.10:0,51,534	1/1:2,26:28:74.98:651,75,0	1/1:3,13:16:8.81:305,9,0	1/1:4,9:13:23.98:208,24,0
chr10	86386800	.	G	GCACA	2332.27	PASS	AB=0.909;AC=22;AF=0.458;AN=48;BaseQRankSum=3.596;DP=398;FS=3.683;HRun=0;HaplotypeScore=75.1418;InbreedingCoeff=0.6082;MQ=65.78;MQ0=22;MQRankSum=-2.486;QD=13.64;ReadPosRankSum=-2.268;VQSLOD=2.5737;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,1:31:38.88:783,39,0	0/1:5,0:5:34.89:194,0,35	./.	./.	0/0:13,0:13:12.50:0,12,166	0/0:24,0:26:23.31:0,23,432	0/0:19,0:20:1.02:0,1,198	1/1:19,0:18:16.66:178,17,0	0/0:6,0:6:9.03:0,9,141	1/1:9,2:12:11.99:179,12,0	1/1:5,4:14:11.51:166,12,0	0/0:11,0:13:15.03:0,15,196	0/0:4,0:4:6.02:0,6,94	0/1:7,0:9:3.46:3,0,85	0/0:10,0:10:3.01:0,3,47	0/0:8,0:8:12.03:0,12,167	1/1:7,4:14:11.78:225,12,0	1/1:14,0:14:12.93:231,13,0	1/1:10,0:13:12.04:191,12,0	0/0:7,0:7:0:0,0,0	1/1:19,0:16:6.02:102,6,0	./.	0/0:4,0:4:3.01:0,3,47	0/0:16,0:16:30.06:0,30,442	0/0:7,0:7:3.01:0,3,47	1/1:15,0:13:11.96:146,12,0	./.	1/1:2,0:6:6.02:104,6,0
chr10	86386923	.	AT	A	521.01	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.720;DP=414;FS=21.592;HRun=8;HaplotypeScore=43.6298;InbreedingCoeff=0.7961;MQ=71.64;MQ0=0;MQRankSum=-0.322;QD=19.30;ReadPosRankSum=0.318;VQSLOD=1.9784;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:47.49:616,47,0	0/0:9,0:10:26.95:0,27,305	0/0:11,0:11:24.28:0,24,256	0/0:9,0:8:18.02:0,18,199	0/0:19,0:19:57.10:0,57,660	0/0:26,0:26:72.19:0,72,837	0/0:16,0:16:45.11:0,45,520	0/0:25,0:25:66.20:0,66,797	0/0:17,0:17:45.12:0,45,530	0/0:20,0:20:57.17:0,57,688	0/0:15,0:15:42.13:0,42,507	0/0:15,0:15:36.09:0,36,422	0/0:7,0:7:21.05:0,21,244	0/0:11,0:11:30.05:0,30,346	0/0:16,0:16:45.13:0,45,532	0/0:12,0:12:36.10:0,36,425	0/0:11,0:11:24.06:0,24,276	0/0:14,0:14:42.13:0,42,507	0/0:17,0:17:45.14:0,45,544	0/0:11,0:11:30.09:0,30,362	0/0:14,0:14:30.09:0,30,362	0/0:1,0:1:3.01:0,3,36	0/0:4,0:4:9.03:0,9,109	0/0:12,0:12:30.09:0,30,362	0/0:21,0:21:60.12:0,60,695	0/0:23,0:23:63.19:0,63,761	0/0:21,0:21:63.17:0,63,747	0/0:9,0:9:27:0,27,307
chr10	86388639	.	C	CTTTCTTT	7687.57	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=4.718;DP=453;FS=5.935;HRun=0;HaplotypeScore=111.9028;InbreedingCoeff=0.8754;MQ=59.84;MQ0=15;MQRankSum=-7.258;QD=31.00;ReadPosRankSum=-1.439;VQSLOD=4.0706;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:17:42:652,42,0	1/1:5,0:4:12.03:212,12,0	0/0:29,0:9:14.87:0,15,152	0/1:29,0:12:7.93:8,0,45	0/0:14,0:16:37.82:0,38,625	0/0:13,0:14:9.47:0,9,600	0/0:11,0:11:30.04:0,30,535	1/1:36,0:34:64.91:1067,65,0	0/0:15,0:15:40.26:0,40,795	1/1:20,0:20:53.67:838,54,0	1/1:16,0:15:35.97:477,36,0	0/0:14,0:14:36.10:0,36,730	0/0:6,0:6:18.05:0,18,352	0/0:7,0:7:15.05:0,15,351	0/0:12,0:13:34.66:0,35,694	0/0:11,0:11:27.03:0,27,635	1/1:20,0:19:40.21:583,40,0	0/0:26,0:26:65.50:0,66,1097	1/1:27,0:24:67.95:1062,68,0	1/1:3,6:11:23.88:420,24,0	1/1:5,0:4:5.99:85,6,0	0/0:4,0:4:6.02:0,6,120	0/0:4,0:4:5.97:0,6,103	0/0:8,0:7:21.06:0,21,409	0/0:20,0:22:54.12:0,54,1037	1/1:20,0:22:60.17:1147,60,0	1/1:18,0:18:48.32:870,48,0	1/1:19,0:19:20.51:266,21,0
chr10	86388642	.	T	TC	2262.11	PASS	AB=0.768;AC=21;AF=0.375;AN=56;BaseQRankSum=6.019;DP=439;FS=6.072;HRun=0;HaplotypeScore=80.5623;InbreedingCoeff=0.6931;MQ=59.20;MQ0=16;MQRankSum=-5.308;QD=10.42;ReadPosRankSum=2.233;VQSLOD=3.8155;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,11:17:12.12:268,12,0	1/1:2,3:4:11.94:90,12,0	0/0:29,0:8:14.03:0,14,154	0/0:27,0:10:7.96:0,8,44	0/0:16,0:16:42.04:0,42,467	0/0:14,0:14:30.12:0,30,377	0/0:10,0:10:30.04:0,30,361	0/1:28,5:31:9.77:320,0,10	0/0:14,0:14:40.63:0,41,506	1/1:19,3:22:28.90:371,29,0	1/1:12,4:15:21.54:187,22,0	0/0:13,0:13:36.10:0,36,457	0/0:7,0:6:18.03:0,18,214	0/0:6,0:6:15.05:0,15,203	0/0:15,0:14:39.09:0,39,478	0/0:10,0:10:27.07:0,27,361	1/1:16,2:16:6.45:141,6,0	0/0:28,0:26:55.99:0,56,730	0/1:21,6:24:91.51:270,0,92	1/1:7,3:10:20.29:119,20,0	1/1:4,0:3:6:61,6,0	0/0:3,0:3:6.02:0,6,82	0/0:3,0:3:8.97:0,9,87	0/0:8,0:7:21.06:0,21,274	0/0:19,0:18:54.07:0,54,630	1/1:17,7:24:11.95:337,12,0	1/1:12,7:18:32.43:262,32,0	0/1:8,13:21:39.82:40,0,41
chr10	86388652	.	T	TTA	4236	PASS	AB=0.667;AC=23;AF=0.411;AN=56;BaseQRankSum=5.783;DP=388;FS=2.054;HRun=0;HaplotypeScore=74.6194;InbreedingCoeff=0.7959;MQ=54.03;MQ0=15;MQRankSum=-7.689;QD=21.72;ReadPosRankSum=-0.180;VQSLOD=4.7967;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:15:29.96:433,30,0	1/1:2,0:4:9.03:131,9,0	0/0:17,0:6:5.28:0,5,52	0/0:18,0:6:2.87:0,3,35	0/0:12,0:11:27:0,27,306	0/0:15,0:15:31.93:0,32,363	0/0:8,0:7:21.07:0,21,270	1/1:7,13:27:53.70:686,54,0	0/0:11,0:11:33.11:0,33,426	1/1:4,11:21:39.86:456,40,0	0/1:7,3:13:33.19:137,0,33	0/0:11,0:11:30.08:0,30,374	0/0:8,0:7:15.03:0,15,176	0/0:8,0:8:21.04:0,21,238	0/0:16,0:15:38.86:0,39,410	0/0:10,0:10:26.89:0,27,330	1/1:7,8:17:15.85:236,16,0	0/0:32,0:28:63.98:0,64,691	1/1:2,12:24:58.72:721,59,0	1/1:4,0:7:11.71:136,12,0	1/1:3,0:2:0.89:2,1,0	0/0:3,0:3:6.02:0,6,77	0/0:2,0:2:5.95:0,6,57	0/0:7,0:6:17.97:0,18,211	0/0:15,0:14:42.08:0,42,483	1/1:7,8:20:45.48:586,45,0	1/1:13,0:20:6.70:388,7,0	1/1:11,0:13:26.97:322,27,0
chr10	86389237	.	TAC	T	996.84	PASS	AB=0.964;AC=24;AF=0.462;AN=52;BaseQRankSum=3.109;DP=395;FS=3.281;HRun=0;HaplotypeScore=51.7830;InbreedingCoeff=0.3689;MQ=70.51;MQ0=4;MQRankSum=0.451;QD=5.03;ReadPosRankSum=-0.282;VQSLOD=2.1747;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:30:33.05:0,33,381	1/1:3,1:4:5.96:52,6,0	./.	./.	0/1:15,1:16:17.80:18,0,143	0/1:9,0:10:8.69:9,0,103	0/1:15,0:15:20.81:21,0,102	0/1:18,0:17:35.66:56,0,36	0/0:11,0:11:15.47:0,15,200	1/1:12,2:14:9.02:98,9,0	1/1:11,0:11:8.50:35,9,0	0/0:14,0:14:17.87:0,18,208	0/0:6,0:6:3.01:0,3,45	0/1:15,2:17:11.83:12,0,217	0/0:11,0:12:3.91:0,4,203	0/0:13,0:13:27.05:0,27,371	1/1:10,7:16:23.93:245,24,0	0/0:16,1:17:4.51:0,5,422	1/1:14,3:17:15.04:164,15,0	1/1:6,6:12:20.89:211,21,0	0/1:18,1:19:12.45:44,0,12	0/0:8,0:8:9.01:0,9,114	0/0:9,0:9:8.95:0,9,87	0/0:22,0:22:4.12:0,4,210	0/0:8,0:8:12.04:0,12,178	1/1:8,1:9:11.52:85,12,0	1/1:8,6:14:11.95:115,12,0	1/1:2,0:3:2.84:14,3,0
chr10	86389309	.	C	CT	2649.62	PASS	AB=0.804;AC=23;AF=0.411;AN=56;BaseQRankSum=-2.276;DP=402;FS=2.782;HRun=12;HaplotypeScore=52.7801;InbreedingCoeff=-0.0016;MQ=68.23;MQ0=2;MQRankSum=-0.881;QD=8.80;ReadPosRankSum=-3.340;VQSLOD=1.6166;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,3:28:4.30:181,4,0	0/1:3,4:7:21.34:125,0,21	0/0:16,0:11:4.98:0,5,28	0/1:12,0:9:20.27:20,0,43	0/0:16,1:17:35.77:0,36,263	0/1:9,0:10:27.41:27,0,74	0/0:22,1:24:20.51:0,21,302	1/1:9,11:22:16.16:276,16,0	0/1:6,1:8:9.25:9,0,94	0/1:9,15:24:3.51:284,0,4	0/1:4,8:12:13.77:204,0,14	0/1:8,1:12:6.01:6,0,100	0/0:5,0:5:5.95:0,6,44	0/1:7,1:8:1.57:2,0,92	0/0:8,0:8:14.87:0,15,109	0/0:4,0:4:5.94:0,6,42	0/1:9,18:26:5.68:422,0,6	0/1:18,1:20:11.01:11,0,193	0/1:15,6:21:54.68:146,0,55	0/1:11,1:12:3.44:114,0,3	0/1:5,5:10:6.88:102,0,7	0/0:6,0:6:16.94:0,17,115	0/0:14,0:15:19.88:0,20,137	0/1:12,1:14:11.98:12,0,166	0/0:5,0:5:11.90:0,12,88	1/1:2,15:17:39.04:372,39,0	0/1:11,5:18:1.53:171,0,2	1/1:2,15:18:35.89:334,36,0
chr10	86389695	.	AACACACACAC	A	600.89	PASS	AC=12;AF=0.250;AN=48;BaseQRankSum=-0.460;DP=411;FS=1.028;HRun=0;HaplotypeScore=113.3194;InbreedingCoeff=0.6777;MQ=53.80;MQ0=10;MQRankSum=-1.325;QD=6.99;ReadPosRankSum=1.297;VQSLOD=2.1022;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:42.13:0,42,1644	0/0:3,0:3:6.02:0,6,232	./.	./.	0/0:9,0:10:6.02:0,6,298	0/0:18,0:17:6.02:0,6,240	0/0:16,0:20:12.02:0,12,433	1/1:18,0:16:6.01:101,6,0	0/0:11,0:11:18.06:0,18,832	0/0:13,0:13:15.05:0,15,679	./.	0/0:16,0:15:6.02:0,6,299	0/0:13,0:13:8.98:0,9,225	0/0:14,0:14:9.03:0,9,405	0/0:19,0:19:27.08:0,27,1074	0/0:28,0:29:30.10:0,30,1287	0/0:22,0:21:14.98:0,15,442	0/0:16,0:15:16.30:0,16,648	1/1:12,0:11:5.01:27,5,0	./.	1/1:27,0:27:15:173,15,0	0/0:2,0:2:3.01:0,3,123	0/0:1,0:1:3.01:0,3,149	0/0:21,0:22:27.09:0,27,1270	0/0:7,0:7:8.54:0,9,440	1/1:13,5:18:12.03:272,12,0	1/1:5,1:5:3.01:89,3,0	1/1:4,0:4:5.95:89,6,0
chr10	86389948	.	GATTT	G	1654.87	PASS	AB=0.727;AC=17;AF=0.370;AN=46;BaseQRankSum=6.441;DP=168;FS=0.000;HRun=0;HaplotypeScore=35.9007;InbreedingCoeff=0.6298;MQ=53.64;MQ0=6;MQRankSum=-2.136;QD=22.36;ReadPosRankSum=2.071;VQSLOD=2.8739;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,11:13:21.07:346,21,0	./.	0/0:7,0:3:6.02:0,6,115	0/0:7,0:1:3.01:0,3,74	0/0:4,0:4:6.02:0,6,109	0/0:17,0:17:45.15:0,45,1047	0/0:9,0:9:9.03:0,9,221	1/1:8,1:6:3.01:50,3,0	0/0:4,0:4:6.02:0,6,148	1/1:1,5:6:15.03:222,15,0	./.	0/0:5,0:4:9.03:0,9,197	0/0:2,0:2:3.01:0,3,74	0/0:2,0:2:6.02:0,6,148	0/0:6,0:6:6.02:0,6,148	0/0:5,0:5:9.02:0,9,138	1/1:3,14:17:30.10:495,30,0	0/0:15,0:15:24.08:0,24,571	0/1:5,3:7:24.32:90,0,24	./.	1/1:0,4:4:9.03:147,9,0	./.	./.	0/0:4,0:4:9.03:0,9,218	0/0:4,0:4:12.04:0,12,295	1/1:2,5:7:15.04:224,15,0	1/1:3,4:6:12.02:199,12,0	1/1:0,2:2:3.01:50,3,0
chr10	86390202	.	GTTGGGGAT	G	4883.09	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=10.604;DP=330;FS=20.086;HRun=0;HaplotypeScore=79.6456;InbreedingCoeff=0.8628;MQ=46.76;MQ0=28;MQRankSum=-9.083;QD=43.60;ReadPosRankSum=-1.324;VQSLOD=2.7414;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:63.22:0,63,2592	1/1:0,1:1:3.01:86,3,0	0/0:6,0:3:8.62:0,9,156	0/0:4,0:2:3.01:0,3,120	0/0:10,0:10:21.06:0,21,929	0/0:12,0:11:33.10:0,33,1243	0/0:21,0:19:51.18:0,51,2068	1/1:4,11:15:33.10:815,33,0	0/0:8,0:7:12.04:0,12,496	1/1:1,4:5:12.04:344,12,0	1/1:5,12:16:3.01:70,3,0	0/0:14,0:13:36.12:0,36,1533	0/0:11,0:10:27.09:0,27,1143	0/0:7,0:7:14.65:0,15,658	0/0:12,0:9:24.08:0,24,1004	0/0:12,0:9:27.09:0,27,1111	1/1:5,14:17:45.15:1275,45,0	0/0:20,0:18:39.13:0,39,1739	1/1:3,8:10:24.08:688,24,0	1/1:3,9:9:6.02:172,6,0	1/1:5,8:10:9.03:258,9,0	0/0:9,0:7:12.04:0,12,531	0/0:8,0:6:18.06:0,18,785	0/0:15,0:15:36.11:0,36,1410	0/0:11,0:11:27.09:0,27,1158	1/1:2,10:10:27.09:745,27,0	1/1:2,5:5:15.05:430,15,0	./.
chr10	86390287	.	GA	G	1061.02	PASS	AB=0.875;AC=9;AF=0.161;AN=56;BaseQRankSum=6.454;DP=433;FS=0.000;HRun=10;HaplotypeScore=46.5363;InbreedingCoeff=0.8731;MQ=59.68;MQ0=3;MQRankSum=-0.166;QD=16.58;ReadPosRankSum=0.797;VQSLOD=3.7017;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:32:65.83:0,66,681	1/1:0,6:6:14.95:123,15,0	0/0:16,0:9:14.44:0,14,168	0/0:5,1:5:12.03:0,12,130	0/0:18,0:17:45.08:0,45,484	0/0:16,0:15:39.06:0,39,411	0/0:15,0:14:30.04:0,30,318	0/0:33,0:35:84.06:0,84,910	0/0:8,0:8:18.05:0,18,199	1/1:1,14:15:41.99:364,42,0	1/1:1,7:8:18:156,18,0	0/0:9,0:9:21.06:0,21,232	0/0:12,0:11:33.09:0,33,365	0/0:11,0:11:33.09:0,33,365	0/0:13,0:13:33.56:0,34,366	0/1:6,1:7:5:5,0,178	1/1:4,24:28:65.97:573,66,0	0/0:27,0:26:72.19:0,72,796	0/0:15,0:15:24.06:0,24,265	0/0:8,0:8:21.05:0,21,225	0/0:11,0:11:27.07:0,27,296	0/0:11,0:12:23.90:0,24,247	0/0:12,0:12:27.07:0,27,299	0/0:18,0:18:45.12:0,45,497	0/0:18,0:18:51.13:0,51,557	0/0:18,0:18:48.13:0,48,531	0/0:19,0:18:54.11:0,54,584	0/0:19,0:19:38.09:0,38,391
chr10	86391153	.	AT	A	259.35	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=5.357;DP=418;FS=0.786;HRun=12;HaplotypeScore=49.1600;InbreedingCoeff=0.3999;MQ=79.25;MQ0=0;MQRankSum=0.573;QD=4.80;ReadPosRankSum=-0.841;VQSLOD=0.6752;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:44.82:348,45,0	0/0:5,0:5:14.93:0,15,138	0/1:21,0:16:14.57:15,0,74	0/1:14,0:10:1.14:1,0,26	0/0:21,0:21:51.10:0,51,517	0/0:8,1:9:3.82:0,4,220	0/0:13,0:13:30.04:0,30,293	0/0:19,0:19:45.06:0,45,439	0/0:15,0:15:39.06:0,39,388	0/0:13,0:13:36.06:0,36,357	0/0:16,0:16:12.86:0,13,305	0/0:10,0:10:17.13:0,17,207	0/0:8,0:8:15.03:0,15,152	0/0:12,0:12:27.01:0,27,261	0/0:11,1:12:3.80:0,4,214	0/0:14,0:14:33:0,33,317	0/0:23,0:23:63.11:0,63,632	0/0:25,0:25:62.99:0,63,608	0/0:13,1:14:6.80:0,7,243	0/0:14,0:15:36.79:0,37,351	0/0:13,0:13:24.05:0,24,244	0/0:11,0:11:26.63:0,27,242	0/0:15,1:16:21.83:0,22,390	0/0:18,0:18:35.71:0,36,436	0/0:15,0:15:33.06:0,33,329	0/0:24,0:24:45.05:0,45,433	0/0:14,0:14:35.65:0,36,338	0/0:9,0:9:15.03:0,15,150
chr10	86391444	.	CT	C	687.18	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=5.854;DP=413;FS=2.376;HRun=10;HaplotypeScore=46.2288;InbreedingCoeff=0.2563;MQ=55.87;MQ0=22;MQRankSum=1.553;QD=4.98;ReadPosRankSum=2.246;VQSLOD=0.2918;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,34:38:46.53:640,47,0	0/0:4,0:4:9.02:0,9,99	0/0:37,0:6:14.19:0,14,110	0/0:41,0:8:8.56:0,9,72	0/0:16,0:14:39.09:0,39,422	0/0:11,0:11:30.08:0,30,332	0/0:12,0:12:26.97:0,27,270	0/1:23,0:20:23.57:24,0,36	0/0:10,0:10:27.07:0,27,298	0/0:17,0:17:36.04:0,36,376	0/0:11,0:11:33.04:0,33,348	0/0:12,0:12:30.08:0,30,332	0/0:9,0:9:21.05:0,21,225	0/0:11,0:11:21.06:0,21,231	0/0:15,0:15:39.03:0,39,408	0/0:6,0:6:18.03:0,18,190	0/0:18,0:18:42.07:0,42,447	0/0:15,0:15:39.09:0,39,422	0/1:16,0:13:26.76:27,0,42	0/1:12,0:12:22.46:22,0,46	0/1:9,0:9:6.08:6,0,82	0/0:3,0:3:6.02:0,6,66	0/0:9,0:9:18.02:0,18,179	0/0:7,0:7:14.97:0,15,150	0/0:8,0:7:21.04:0,21,223	0/1:13,0:11:19.37:19,0,22	1/1:16,0:16:22.29:75,22,0	0/1:10,0:10:13.06:28,0,13
chr10	86391454	.	TA	T	1789.65	PASS	AB=0.980;AC=17;AF=0.304;AN=56;BaseQRankSum=2.385;DP=427;FS=1.090;HRun=6;HaplotypeScore=49.9033;InbreedingCoeff=0.6429;MQ=58.79;MQ0=25;MQRankSum=1.996;QD=10.23;ReadPosRankSum=-0.718;VQSLOD=0.5643;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:40:21.20:21,0,40	0/0:3,0:3:5.19:0,5,14	0/0:47,0:7:20.40:0,20,155	0/0:48,0:12:18.29:0,18,153	0/0:17,0:15:42.05:0,42,495	0/0:12,0:12:33.06:0,33,397	0/0:10,0:10:24.05:0,24,274	1/1:7,17:19:41.49:393,41,0	0/0:12,0:12:36.08:0,36,405	0/1:15,1:16:26.21:26,0,30	0/0:13,0:13:0.04:0,0,28	0/0:13,0:13:33.09:0,33,402	0/0:9,0:9:22.57:0,23,274	0/0:8,0:8:24:0,24,269	0/0:13,0:13:35.47:0,35,411	0/0:6,0:6:15.05:0,15,189	0/1:20,0:20:33.03:99,0,33	0/0:14,0:14:37.32:0,37,417	1/1:3,13:14:32.93:303,33,0	1/1:5,7:12:26.22:273,26,0	1/1:4,4:8:3.01:31,3,0	0/0:4,0:4:9.02:0,9,100	0/0:7,0:7:11.87:0,12,126	0/0:7,0:7:17.99:0,18,183	0/0:9,0:8:24:0,24,269	1/1:5,6:10:21.04:218,21,0	1/1:0,17:17:30.03:318,30,0	1/1:2,9:11:24.40:300,24,0
chr10	86391551	.	TA	T	5022.38	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=8.035;DP=519;FS=1.199;HRun=10;HaplotypeScore=55.2514;InbreedingCoeff=0.9914;MQ=71.27;MQ0=5;MQRankSum=0.765;QD=19.24;ReadPosRankSum=2.762;VQSLOD=5.7072;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,43:51:99:1016,117,0	1/1:1,6:7:12:104,12,0	0/0:26,0:16:16.07:0,16,252	0/0:19,0:9:17.89:0,18,146	0/0:24,1:26:63:0,63,678	0/0:13,0:13:27.07:0,27,297	0/0:13,0:13:30.08:0,30,332	1/1:5,14:16:35.95:312,36,0	0/0:15,0:15:39.11:0,39,431	1/1:2,24:26:68.96:591,69,0	1/1:1,13:14:32.99:286,33,0	0/0:13,0:13:33.09:0,33,362	0/0:12,0:11:33.05:0,33,346	0/0:11,0:11:30.08:0,30,332	0/0:18,0:18:45.11:0,45,489	0/0:16,0:16:42.10:0,42,456	1/1:1,29:30:71.98:625,72,0	0/0:18,0:18:49.30:0,49,505	1/1:7,10:17:19.90:268,20,0	1/1:4,15:19:38.98:338,39,0	1/1:6,13:19:41.98:364,42,0	0/0:13,0:13:33.09:0,33,364	0/0:14,0:14:33.07:0,33,350	0/0:14,0:14:39.11:0,39,431	0/0:16,0:15:36.07:0,36,386	1/1:6,16:20:44.99:390,45,0	1/1:2,20:22:44.88:390,45,0	1/1:3,12:15:38.98:338,39,0
chr10	86391928	.	ACG	A	3049.12	PASS	AB=0.954;AC=25;AF=0.446;AN=56;BaseQRankSum=9.304;DP=623;FS=0.346;HRun=0;HaplotypeScore=110.8290;InbreedingCoeff=0.3281;MQ=52.37;MQ0=12;MQRankSum=0.580;QD=7.78;ReadPosRankSum=-5.607;VQSLOD=2.1473;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:27.40:202,27,0	0/1:10,0:10:23.25:28,0,23	0/1:30,0:7:7.56:8,0,21	0/1:29,0:12:13.90:14,0,99	0/1:28,0:28:3.15:3,0,585	0/0:25,0:25:15.43:0,15,339	0/0:28,0:28:8.63:0,9,608	1/1:40,0:40:35.38:669,35,0	0/0:17,0:17:11.76:0,12,311	1/1:25,0:25:9.92:322,10,0	1/1:19,0:18:23.96:197,24,0	0/0:26,0:26:34.47:0,34,815	0/0:17,0:16:5.01:0,5,273	0/1:20,0:20:23.68:24,0,385	0/0:9,0:8:2.08:0,2,212	0/1:14,0:14:30.97:31,0,288	1/1:17,0:17:11.55:185,12,0	0/0:12,0:11:16.70:0,17,284	0/1:23,0:21:6:330,0,6	1/1:22,0:22:7.21:151,7,0	1/1:31,0:30:49.42:387,49,0	0/0:29,0:28:42.20:0,42,586	0/0:22,0:21:25.25:0,25,416	0/0:25,0:25:8.83:0,9,676	0/0:21,0:21:9.65:0,10,580	0/1:8,20:27:19.69:283,0,20	0/1:16,0:14:3.43:167,0,3	1/1:15,0:14:20.92:238,21,0
chr10	86391929	.	C	CAT	1521.38	PASS	AB=0.928;AC=12;AF=0.214;AN=56;BaseQRankSum=5.925;DP=612;FS=10.505;HRun=0;HaplotypeScore=117.9747;InbreedingCoeff=-0.1026;MQ=52.65;MQ0=11;MQRankSum=0.995;QD=6.31;ReadPosRankSum=-2.489;VQSLOD=2.1614;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:8.64:0,9,177	0/1:5,5:10:42.95:43,0,60	0/0:28,0:6:9.27:0,9,48	0/0:29,0:12:21.88:0,22,199	0/0:28,0:28:72.01:0,72,866	0/0:25,0:25:56.68:0,57,553	0/0:27,0:27:68.88:0,69,733	0/1:40,0:40:99:402,0,104	0/0:16,0:16:35.18:0,35,416	0/1:9,15:25:66:260,0,66	1/1:16,0:15:5.09:126,5,0	0/0:26,0:26:56.46:0,56,871	0/0:17,0:16:41.69:0,42,379	0/0:20,0:20:53.85:0,54,538	0/0:8,0:8:21.01:0,21,275	0/0:14,0:14:41.91:0,42,449	0/1:17,0:17:26.65:101,0,27	0/0:12,0:11:29.92:0,30,344	0/1:22,0:20:93.01:93,0,125	0/1:22,0:22:27.07:100,0,27	0/1:30,0:29:13.32:210,0,13	0/0:29,0:28:65.87:0,66,805	0/0:22,0:21:53.97:0,54,652	0/0:24,0:24:62.49:0,62,828	0/0:21,0:21:54:0,54,669	0/1:28,0:27:99:156,0,110	0/1:16,0:14:49.62:88,0,50	0/1:15,0:14:73.42:96,0,73
chr10	86392084	.	A	AGT	2094.07	PASS	AB=0.889;AC=23;AF=0.426;AN=54;BaseQRankSum=8.392;DP=684;FS=21.121;HRun=0;HaplotypeScore=134.3720;InbreedingCoeff=0.6290;MQ=61.02;MQ0=7;MQRankSum=-1.313;QD=6.98;ReadPosRankSum=-3.687;VQSLOD=0.9767;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:29:20.99:198,21,0	1/1:10,0:10:9.02:105,9,0	./.	0/0:25,0:14:2.79:0,3,30	0/1:19,0:22:3.40:3,0,191	0/0:17,0:16:20.99:0,21,202	0/0:24,0:26:39.02:0,39,401	1/1:23,0:23:23.60:193,24,0	0/0:22,0:23:47.62:0,48,451	1/1:26,0:26:27.05:303,27,0	1/1:19,1:21:2.44:263,2,0	0/0:30,0:30:53.93:0,54,563	0/0:23,0:25:53.80:0,54,555	0/0:19,0:19:33.05:0,33,356	0/0:17,0:18:23.90:0,24,249	0/0:18,0:20:44.31:0,44,409	0/1:33,0:33:44.98:391,0,45	0/1:14,13:27:67.77:293,0,68	1/1:29,0:27:9.01:110,9,0	1/1:23,0:22:3:28,3,0	0/0:41,0:40:1.72:0,2,6	0/0:27,0:29:41.92:0,42,439	0/0:20,0:21:32.90:0,33,339	0/0:33,0:35:69.32:0,69,720	0/0:19,0:19:32.89:0,33,330	1/1:30,0:29:9.25:157,9,0	1/1:10,0:9:1.69:40,2,0	1/1:15,0:15:21.02:199,21,0
chr10	86392116	.	T	TGTGC	4184.06	PASS	AB=0.824;AC=17;AF=0.304;AN=56;BaseQRankSum=-3.848;DP=707;FS=0.361;HRun=0;HaplotypeScore=146.0702;InbreedingCoeff=0.3992;MQ=54.64;MQ0=10;MQRankSum=-2.874;QD=13.54;ReadPosRankSum=-0.037;VQSLOD=3.3931;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:35:99:119,0,259	1/1:1,6:7:9.03:243,9,0	0/0:31,0:14:32.21:0,32,334	0/0:33,0:15:32.22:0,32,371	0/0:18,0:18:36.89:0,37,530	0/0:17,0:16:38.95:0,39,452	0/0:24,0:24:62.99:0,63,850	1/1:26,0:26:11.65:306,12,0	0/0:28,0:28:71.84:0,72,948	1/1:4,15:24:45.46:824,45,0	0/1:4,11:18:8.16:508,0,8	0/0:34,0:33:86.60:0,87,1219	0/0:23,0:23:66.14:0,66,1079	0/0:17,0:17:45.05:0,45,697	0/0:15,0:15:32.65:0,33,504	0/0:24,0:24:68.62:0,69,902	0/1:6,27:37:22.69:933,0,23	0/0:27,0:26:7.80:0,8,290	0/1:29,0:26:82.57:205,0,83	0/1:12,10:24:14.29:74,0,14	1/1:54,0:54:45.37:403,45,0	0/0:22,0:22:54.13:0,54,863	0/0:21,0:19:48.02:0,48,717	0/0:42,0:41:99:0,111,1602	0/0:21,0:21:60.04:0,60,766	0/1:23,0:22:21.15:225,0,21	0/1:13,0:12:48.57:65,0,49	1/1:15,0:16:21.06:279,21,0
chr10	86392156	.	C	CTG	1209.23	PASS	AB=0.957;AC=3;AF=0.054;AN=56;BaseQRankSum=-3.182;DP=751;FS=6.554;HRun=0;HaplotypeScore=132.7086;InbreedingCoeff=0.5241;MQ=61.55;MQ0=5;MQRankSum=1.201;QD=18.89;ReadPosRankSum=-0.731;VQSLOD=3.5945;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,24:42:23.50:1281,23,0	0/0:7,0:7:15.01:0,15,166	0/0:30,0:20:0.35:0,0,192	0/0:41,0:32:29.57:0,30,382	0/0:21,0:21:54.15:0,54,642	0/0:14,0:14:33.49:0,33,370	0/0:30,0:30:65.52:0,66,735	0/0:27,0:29:47.52:0,48,491	0/0:27,0:27:60.10:0,60,675	0/0:34,0:34:81.08:0,81,926	0/0:8,0:8:12.04:0,12,145	0/0:32,1:34:19.76:0,20,680	0/0:24,0:24:53.83:0,54,579	0/0:30,0:30:72.21:0,72,859	0/0:21,0:21:45.29:0,45,505	0/0:29,0:28:45.86:0,46,783	0/0:34,0:34:39.08:0,39,447	0/1:20,1:22:32.62:33,0,391	0/0:25,0:25:60.11:0,60,696	0/0:15,0:15:24.07:0,24,288	0/0:67,1:69:99:0,103,1827	0/0:24,0:24:55.17:0,55,611	0/0:14,0:13:21.06:0,21,254	0/0:45,0:47:99:0,102,1122	0/0:16,0:16:32.59:0,33,341	0/0:33,0:33:75.16:0,75,882	0/0:13,0:13:36.09:0,36,423	0/0:15,0:17:29.92:0,30,341
chr10	86392473	.	CTG	C	2888.53	PASS	AB=0.884;AC=26;AF=0.464;AN=56;BaseQRankSum=8.727;DP=842;FS=0.408;HRun=0;HaplotypeScore=112.4968;InbreedingCoeff=-0.0189;MQ=54.10;MQ0=19;MQRankSum=1.082;QD=4.63;ReadPosRankSum=0.770;VQSLOD=2.6799;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:58,5:58:99:140,0,740	0/0:6,0:6:15.05:0,15,230	0/0:46,0:13:12.02:0,12,149	0/0:49,0:28:18.01:0,18,213	0/1:19,3:19:78.10:78,0,203	0/1:24,1:24:6.94:7,0,340	0/1:36,4:41:96.21:96,0,535	1/1:21,3:23:14.70:130,15,0	0/0:26,1:27:16.98:0,17,671	0/0:40,1:38:8.54:0,9,486	0/0:8,0:8:15.03:0,15,205	0/1:35,5:41:73.05:73,0,657	0/1:26,0:26:5.67:6,0,446	0/0:29,0:29:45.10:0,45,609	0/1:40,3:45:52.33:52,0,860	0/1:30,1:32:12.09:12,0,423	0/1:29,3:31:85.10:85,0,541	1/1:9,18:28:20.31:525,20,0	1/1:17,3:12:11.84:116,12,0	1/1:9,2:11:6.02:68,6,0	1/1:64,18:79:71.32:748,71,0	0/1:17,2:19:41.03:41,0,295	0/1:8,2:10:50.06:50,0,164	0/1:34,5:39:32.94:33,0,824	0/0:11,0:11:15.05:0,15,227	0/1:15,6:21:19.34:206,0,19	1/1:9,12:20:41.79:454,42,0	0/1:8,4:13:28.01:152,0,28
chr10	86392529	.	CGT	C	1150.95	PASS	AB=0.893;AC=25;AF=0.463;AN=54;BaseQRankSum=3.933;DP=675;FS=0.558;HRun=0;HaplotypeScore=124.0266;InbreedingCoeff=0.1205;MQ=56.14;MQ0=9;MQRankSum=-1.275;QD=3.20;ReadPosRankSum=1.673;VQSLOD=2.6718;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:31:17.35:0,17,155	1/1:4,2:7:2.86:33,3,0	0/0:30,0:15:0:0,0,0	./.	0/1:19,4:23:70.13:70,0,286	0/1:16,4:20:45.70:46,0,185	0/0:30,0:30:39.13:0,39,566	1/1:28,0:27:9.74:40,10,0	0/1:19,4:24:36.68:37,0,314	1/1:24,7:31:36.09:396,36,0	1/1:5,1:6:3.01:33,3,0	0/1:27,2:30:49.48:49,0,535	0/1:12,2:16:70.82:71,0,155	0/1:22,0:23:3.29:3,0,329	0/1:30,1:31:29.89:30,0,408	0/1:23,5:29:58.01:58,0,436	1/1:13,9:23:26.91:281,27,0	0/0:30,0:34:44.96:0,45,446	0/0:18,0:21:14.98:0,15,144	0/1:11,0:15:8.83:9,0,142	0/0:62,0:68:35.81:0,36,678	0/1:7,1:8:21.36:21,0,124	0/0:13,0:13:18.06:0,18,272	0/0:29,0:30:27.86:0,28,545	0/1:12,1:13:12.31:12,0,251	1/1:14,0:19:16.24:81,16,0	0/0:13,0:16:17.95:0,18,164	1/1:6,0:10:11.36:56,11,0
chr10	86392613	.	A	AG	12609.44	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-13.708;DP=665;FS=5.366;HRun=0;HaplotypeScore=73.1802;InbreedingCoeff=0.9918;MQ=85.65;MQ0=1;MQRankSum=-4.298;QD=44.71;ReadPosRankSum=0.611;VQSLOD=5.1526;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:38:99:1774,111,0	1/1:0,3:3:9.03:144,9,0	0/0:22,0:22:66.03:0,66,796	0/0:33,0:33:87.90:0,88,1038	0/0:15,0:15:42.07:0,42,531	0/0:19,0:19:57.19:0,57,796	0/0:43,0:43:99:0,126,1762	1/1:1,20:21:57.16:841,57,0	0/0:24,0:24:72.21:0,72,971	1/1:0,27:27:78.27:1243,78,0	1/1:0,16:16:48.16:767,48,0	0/0:27,0:26:78.26:0,78,1090	0/0:17,0:17:51.17:0,51,713	0/0:20,0:20:60.19:0,60,818	0/0:39,0:39:99:0,114,1594	0/0:37,0:37:99:0,108,1476	1/1:0,28:28:75.26:1199,75,0	0/0:25,0:25:75.21:0,75,1027	1/1:2,19:20:57.19:907,57,0	1/1:0,16:16:45.15:719,45,0	1/1:1,41:42:99:1918,120,0	0/0:14,0:14:42.14:0,42,587	0/0:16,0:16:48.16:0,48,671	0/0:22,0:22:63.21:0,63,880	0/0:10,0:10:30.10:0,30,420	1/1:3,26:29:78.27:1234,78,0	1/1:0,20:20:57.19:906,57,0	1/1:0,21:21:60.20:959,60,0
chr10	86394312	.	G	GA	1095.07	PASS	AB=0.832;AC=14;AF=0.250;AN=56;BaseQRankSum=0.863;DP=510;FS=0.554;HRun=13;HaplotypeScore=74.0503;InbreedingCoeff=0.5375;MQ=56.76;MQ0=15;MQRankSum=-2.060;QD=6.89;ReadPosRankSum=-3.979;VQSLOD=1.6556;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:35:43.71:0,44,283	0/0:7,0:8:11.87:0,12,82	0/0:7,0:4:8.84:0,9,55	0/1:6,0:4:3.36:23,0,3	0/0:31,0:32:18.65:0,19,263	0/0:14,0:14:23.75:0,24,163	0/1:12,1:10:4.06:4,0,120	1/1:13,15:24:21.40:326,21,0	0/0:7,1:9:0.59:0,1,89	0/0:22,0:25:25.59:0,26,157	0/0:22,0:21:16.72:0,17,108	0/0:15,1:18:2.89:0,3,148	0/0:16,1:17:4.63:0,5,177	0/0:12,0:12:17.74:0,18,123	0/0:19,0:20:49.57:0,50,333	0/0:16,1:16:1.53:0,2,156	0/0:24,1:26:26.67:0,27,313	0/0:18,0:17:26.66:0,27,185	0/1:11,8:19:17.94:158,0,18	1/1:7,11:19:3.69:213,4,0	1/1:11,5:19:14.85:126,15,0	0/0:12,1:14:25.72:0,26,170	0/0:18,0:18:22.74:0,23,150	0/0:25,1:25:15.93:0,16,255	0/0:9,0:9:17.84:0,18,123	1/1:19,3:22:16.82:153,17,0	1/1:8,10:17:14.97:131,15,0	0/1:6,5:13:3.56:131,0,4
chr10	86394725	.	AAAGC	A	7701.02	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.551;DP=599;FS=7.707;HRun=0;HaplotypeScore=102.4816;InbreedingCoeff=0.9973;MQ=85.14;MQ0=0;MQRankSum=-5.533;QD=49.37;ReadPosRankSum=-0.980;VQSLOD=5.4528;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,3637	0/0:8,0:8:21.07:0,21,561	0/0:19,0:19:56.20:0,56,1290	0/0:22,0:22:59.19:0,59,1270	0/0:30,0:30:84.27:0,84,2155	0/0:16,0:16:48.16:0,48,1283	0/0:20,0:20:60.19:0,60,1526	1/1:1,31:32:93.32:1725,93,0	0/0:24,0:24:72.25:0,72,1905	0/0:17,0:17:51.18:0,51,1322	0/0:19,0:19:54.18:0,54,1366	0/0:16,0:16:48.16:0,48,1258	0/0:27,0:27:75.26:0,75,1974	0/0:17,0:17:48.15:0,48,1215	0/0:29,0:29:81.28:0,81,2165	0/0:16,0:16:42.14:0,42,1123	0/0:23,0:23:63.22:0,63,1614	0/0:25,0:25:69.24:0,69,1801	1/1:0,24:24:72.25:1324,72,0	1/1:3,13:16:36.12:644,36,0	1/1:0,36:36:89.45:1678,89,0	0/0:15,0:15:45.14:0,45,1125	0/0:8,0:8:24.08:0,24,641	0/0:24,0:24:69.24:0,69,1748	0/0:19,0:19:54.19:0,54,1440	1/1:1,25:26:75.23:1372,75,0	1/1:1,13:14:33.11:620,33,0	1/1:0,8:8:18.06:338,18,0
chr10	86394876	.	CTTT	C	1779.48	PASS	AB=0.633;AC=13;AF=0.232;AN=56;BaseQRankSum=1.387;DP=483;FS=1.718;HRun=15;HaplotypeScore=75.6471;InbreedingCoeff=0.6974;MQ=78.21;MQ0=4;MQRankSum=-0.323;QD=11.41;ReadPosRankSum=4.605;VQSLOD=0.6958;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:60.46:0,60,808	0/0:3,0:3:6.02:0,6,110	0/0:30,0:16:23.44:0,23,273	0/0:28,0:16:13.54:0,14,160	0/0:23,0:26:60.37:0,60,778	0/0:17,0:18:38.11:0,38,537	0/0:16,0:16:42.13:0,42,718	0/1:12,11:22:11.92:188,0,12	0/0:12,0:12:21.05:0,21,345	0/0:9,0:10:30.05:0,30,418	0/0:18,0:18:37.61:0,38,535	0/0:9,0:9:21.04:0,21,294	0/0:8,0:9:24.03:0,24,335	0/0:8,0:8:14.99:0,15,164	0/0:25,0:26:60.08:0,60,931	0/0:7,0:9:19.31:0,19,307	0/0:28,0:29:84.23:0,84,1324	1/1:5,18:24:33.73:504,34,0	0/1:5,9:15:4.43:188,0,4	0/1:7,8:16:11.76:97,0,12	1/1:11,9:20:9.95:130,10,0	0/0:8,0:8:18.06:0,18,330	0/0:6,0:7:16.58:0,17,246	0/0:15,0:19:39.09:0,39,618	0/0:15,0:15:36.08:0,36,546	1/1:5,12:18:38.74:392,39,0	1/1:11,13:24:29.82:325,30,0	1/1:9,5:14:11.91:134,12,0
chr10	86394889	.	TTTC	T	409.06	PASS	AB=0.972;AC=9;AF=0.161;AN=56;BaseQRankSum=8.471;DP=485;FS=50.078;HRun=0;HaplotypeScore=78.2377;InbreedingCoeff=0.0345;MQ=65.81;MQ0=10;MQRankSum=-3.014;QD=2.86;ReadPosRankSum=4.799;VQSLOD=-0.4246;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:34.08:0,34,720	0/0:3,0:3:9.02:0,9,138	0/0:31,0:11:10.79:0,11,214	0/0:25,0:8:2.89:0,3,95	0/0:25,0:25:33.08:0,33,711	0/0:16,0:16:32.40:0,32,493	0/0:14,0:14:42.14:0,42,735	0/1:22,0:18:37.37:65,0,37	0/0:12,0:12:32.99:0,33,414	0/0:14,0:13:32.84:0,33,406	0/0:20,0:19:44.33:0,44,611	0/0:9,0:9:23.99:0,24,280	0/0:9,0:9:20.75:0,21,268	0/0:12,0:12:23.89:0,24,245	0/0:23,0:23:40.21:0,40,857	0/0:10,0:10:29.45:0,29,359	0/0:31,0:31:77.68:0,78,1125	0/1:24,1:24:32.23:166,0,32	0/1:15,0:11:34.30:34,0,39	0/1:18,0:18:2.85:3,0,160	0/1:14,1:15:52.75:53,0,54	0/0:8,0:8:24.05:0,24,389	0/0:8,0:8:1.21:0,1,280	0/0:21,0:21:44.88:0,45,626	0/0:17,0:17:40.85:0,41,521	0/1:25,1:25:63.32:63,0,212	0/1:16,1:17:15.24:105,0,15	1/1:5,0:5:11.27:57,11,0
chr10	86395417	.	T	TA	1132.03	PASS	AB=0.776;AC=13;AF=0.232;AN=56;BaseQRankSum=6.439;DP=369;FS=5.015;HRun=0;HaplotypeScore=63.5122;InbreedingCoeff=0.6456;MQ=57.25;MQ0=11;MQRankSum=-3.325;QD=15.30;ReadPosRankSum=1.190;VQSLOD=5.2165;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:15.06:0,15,149	0/0:13,0:13:20.72:0,21,234	0/0:24,0:7:13.24:0,13,156	0/1:20,0:8:0.67:1,0,126	0/0:28,0:28:75.23:0,75,1001	0/0:14,0:14:36.09:0,36,482	0/0:13,0:13:36.02:0,36,442	0/1:5,4:14:66.56:245,0,67	0/0:10,0:10:27.08:0,27,362	0/0:15,0:13:39.12:0,39,526	0/0:15,0:15:38.84:0,39,465	0/0:8,0:8:24.08:0,24,334	0/0:6,0:6:17.65:0,18,220	0/0:13,0:13:39.11:0,39,511	0/0:13,0:13:33.07:0,33,439	0/0:11,0:11:30.09:0,30,405	0/0:26,0:24:44.51:0,45,574	0/0:14,0:14:42.14:0,42,573	1/1:1,7:7:15.03:210,15,0	1/1:2,1:4:6.86:68,7,0	1/1:0,1:1:3.01:37,3,0	0/0:5,0:3:9.03:0,9,126	0/0:6,0:6:15.05:0,15,209	0/0:19,0:18:45.11:0,45,607	0/0:22,0:20:57.19:0,57,796	0/1:1,8:9:14.82:315,0,15	1/1:1,7:9:12.04:186,12,0	1/1:0,7:7:15.05:234,15,0
chr10	86395421	.	G	GTTCT	2506.12	PASS	AB=0.750;AC=11;AF=0.196;AN=56;BaseQRankSum=-1.112;DP=384;FS=15.767;HRun=0;HaplotypeScore=82.1855;InbreedingCoeff=0.7533;MQ=55.64;MQ0=15;MQRankSum=-3.282;QD=22.58;ReadPosRankSum=-1.006;VQSLOD=1.9656;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:24:18.05:241,18,0	1/1:0,9:12:20.88:366,21,0	0/0:23,0:6:10.79:0,11,90	0/0:17,0:8:14.30:0,14,111	0/0:26,0:27:75.09:0,75,1062	0/0:16,0:16:39.02:0,39,541	0/0:12,0:12:32.88:0,33,471	0/0:19,0:16:17.24:0,17,269	0/0:10,0:11:30.07:0,30,507	1/1:5,11:15:44.99:742,45,0	1/1:0,12:15:33.50:569,34,0	0/0:8,0:9:23.88:0,24,328	0/0:6,0:6:18.03:0,18,278	0/0:13,0:14:37.89:0,38,587	0/0:13,0:13:38.88:0,39,511	0/0:10,0:10:27.03:0,27,360	1/1:6,15:25:40.04:727,40,0	0/1:10,0:14:35.58:36,0,98	0/0:8,0:7:6.04:0,6,69	0/0:2,0:2:2.96:0,3,19	0/0:1,0:1:2.60:0,3,10	0/0:5,0:3:9.02:0,9,113	0/0:6,0:6:17.99:0,18,241	0/0:19,0:20:41.63:0,42,652	0/0:17,0:20:54.11:0,54,789	0/0:10,0:10:7.67:0,8,90	0/0:11,0:11:13.54:0,14,76	0/0:6,0:6:14.77:0,15,92
chr10	86396068	.	GCA	G	2199	PASS	AB=0.807;AC=16;AF=0.286;AN=56;BaseQRankSum=5.898;DP=483;FS=0.000;HRun=0;HaplotypeScore=74.7669;InbreedingCoeff=0.5674;MQ=62.47;MQ0=5;MQRankSum=2.242;QD=12.71;ReadPosRankSum=1.669;VQSLOD=3.2260;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:28:15.45:0,15,133	0/0:3,0:9:15:0,15,131	0/0:15,0:4:3.01:0,3,30	0/0:11,0:5:5.75:0,6,64	0/0:13,0:13:32.99:0,33,442	0/1:15,2:18:11.45:11,0,414	0/0:22,0:22:53.59:0,54,695	1/1:8,18:26:53.74:495,54,0	0/0:16,0:16:1.94:0,2,403	0/0:8,0:20:38.30:0,38,320	0/0:7,0:15:17.45:0,17,100	0/0:19,0:18:36.07:0,36,485	0/0:13,0:13:39.09:0,39,555	0/0:15,0:15:36.11:0,36,557	0/0:15,0:15:39.11:0,39,577	0/0:16,0:16:36.05:0,36,441	0/0:7,0:25:23.78:0,24,193	0/0:31,3:34:38.72:0,39,991	1/1:5,11:13:29.98:317,30,0	0/1:2,15:18:21.47:241,0,21	1/1:2,27:31:16.81:403,17,0	0/0:9,0:9:18.03:0,18,243	0/1:10,0:10:39.69:40,0,170	0/1:13,3:16:30.66:31,0,454	0/0:14,0:14:36.08:0,36,510	1/1:2,14:16:41.99:471,42,0	1/1:2,13:16:23.90:268,24,0	1/1:1,5:6:9.03:109,9,0
chr10	86397604	.	GAAA	G	3768.38	PASS	AB=0.913;AC=13;AF=0.232;AN=56;BaseQRankSum=6.487;DP=644;FS=4.141;HRun=13;HaplotypeScore=102.6781;InbreedingCoeff=0.8982;MQ=71.45;MQ0=1;MQRankSum=-3.460;QD=22.98;ReadPosRankSum=5.044;VQSLOD=2.8861;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,34:37:74.46:1038,74,0	1/1:3,8:11:17.78:215,18,0	0/0:23,0:20:23.81:0,24,469	0/0:19,0:17:26.67:0,27,357	0/0:24,0:26:70.43:0,70,1192	0/0:22,0:25:63.22:0,63,1169	0/0:12,0:13:36.12:0,36,651	0/0:23,0:24:51.64:0,52,909	0/0:22,0:24:69.21:0,69,1176	1/1:5,18:24:38.36:571,38,0	1/1:2,22:24:64.62:800,65,0	0/0:22,0:24:59.39:0,59,1044	0/0:14,0:15:36.11:0,36,599	0/0:19,0:21:57.13:0,57,942	0/0:30,0:35:93.25:0,93,1540	0/0:22,0:25:67.40:0,67,1044	1/1:2,20:22:51.14:618,51,0	1/1:6,18:25:39.48:506,39,0	0/0:15,0:18:48.12:0,48,837	0/0:23,0:26:66.12:0,66,984	0/0:21,0:22:57.15:0,57,934	0/0:25,0:26:70.46:0,70,1189	0/0:15,0:16:39.10:0,39,669	0/0:24,0:25:69.21:0,69,1271	0/0:14,0:14:42.14:0,42,778	0/1:19,2:21:20.83:21,0,639	0/0:25,0:28:68.20:0,68,1140	0/0:23,0:26:75.19:0,75,1293
chr10	86398000	.	T	TGC	2249.74	PASS	AB=0.792;AC=14;AF=0.250;AN=56;BaseQRankSum=-5.119;DP=564;FS=0.447;HRun=0;HaplotypeScore=84.0349;InbreedingCoeff=0.7746;MQ=64.43;MQ0=7;MQRankSum=-0.391;QD=14.15;ReadPosRankSum=1.439;VQSLOD=2.9733;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:6.36:0,6,139	0/0:8,0:8:15.02:0,15,172	0/0:26,0:17:36.50:0,36,353	0/0:42,0:16:39.93:0,40,344	0/0:19,0:19:33.20:0,33,480	0/0:18,0:18:51.02:0,51,532	0/0:25,0:24:61.62:0,62,605	1/1:27,0:27:48.04:389,48,0	0/0:12,0:12:35.95:0,36,337	0/0:20,0:20:48.08:0,48,518	0/0:11,0:11:30.07:0,30,375	0/0:22,0:22:58.45:0,58,601	0/0:11,0:11:23.99:0,24,243	0/0:12,0:12:30.03:0,30,328	0/0:13,0:13:24.02:0,24,261	0/0:22,0:22:48.09:0,48,573	0/0:29,0:29:50.36:0,50,751	0/1:28,0:28:99:169,0,219	1/1:2,8:12:29.40:256,29,0	0/1:4,9:14:5.10:80,0,5	1/1:5,21:25:20.65:463,21,0	0/0:14,0:14:12.15:0,12,288	0/0:18,0:17:39.97:0,40,370	0/0:37,0:37:93.11:0,93,1043	0/0:14,0:14:29.04:0,29,362	1/1:2,17:21:38.70:636,39,0	1/1:4,14:19:3.50:206,4,0	1/1:4,7:11:17.56:236,18,0
chr10	86398130	.	CTTTTT	C	800.09	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.770;DP=473;FS=0.000;HRun=17;HaplotypeScore=84.0703;InbreedingCoeff=0.7246;MQ=59.52;MQ0=6;MQRankSum=-0.385;QD=19.51;ReadPosRankSum=4.853;VQSLOD=0.4116;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,26:41:61.60:895,62,0	0/0:6,0:6:12.04:0,12,287	0/0:17,0:11:20.84:0,21,242	0/0:7,0:5:2.66:0,3,11	0/0:14,0:18:39.13:0,39,751	0/0:21,0:20:42.12:0,42,1005	0/0:21,0:23:36.12:0,36,812	0/0:21,0:20:40:0,40,871	0/0:14,0:15:38.49:0,38,827	0/0:14,0:14:30.10:0,30,648	0/0:11,0:12:26.12:0,26,559	0/0:23,0:24:63.20:0,63,1332	0/0:18,0:19:42.13:0,42,912	0/0:10,0:11:17.74:0,18,531	0/0:15,0:17:39.13:0,39,836	0/0:17,0:16:39.13:0,39,876	0/0:18,0:18:36.11:0,36,833	0/0:16,0:23:24.97:0,25,524	0/0:12,0:14:24.06:0,24,492	0/0:17,0:17:22.89:0,23,494	0/0:6,0:5:6.91:0,7,139	0/0:7,0:8:19.62:0,20,415	0/0:13,0:14:18.06:0,18,372	0/0:17,0:20:36.12:0,36,857	0/0:20,0:20:44.50:0,44,1011	0/0:14,0:25:54.17:0,54,1221	0/0:12,0:13:39.13:0,39,825	0/0:3,0:9:9.03:0,9,195
chr10	86398882	.	C	CT	4036.06	PASS	AB=0.780;AC=24;AF=0.429;AN=56;BaseQRankSum=-2.809;DP=339;FS=8.933;HRun=10;HaplotypeScore=36.4516;InbreedingCoeff=0.8361;MQ=66.03;MQ0=1;MQRankSum=0.702;QD=19.88;ReadPosRankSum=-0.986;VQSLOD=3.3475;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,28:35:35.51:583,36,0	1/1:1,6:8:14.20:186,14,0	0/0:7,0:6:2.99:0,3,25	0/0:6,0:6:14.85:0,15,111	0/0:17,0:16:41.94:0,42,345	0/0:15,0:15:32.94:0,33,271	0/0:13,0:13:35.96:0,36,296	1/1:12,23:35:64.04:673,64,0	0/0:10,0:10:20.95:0,21,172	1/1:3,4:7:9.02:96,9,0	1/1:3,5:8:14.99:147,15,0	0/1:9,0:9:3.14:3,0,127	0/0:10,0:10:26.97:0,27,222	0/0:7,0:8:23.01:0,23,178	0/0:7,0:7:17.95:0,18,145	0/0:5,0:5:14.98:0,15,123	1/1:1,22:23:57.14:607,57,0	0/0:16,0:16:44.94:0,45,369	1/1:2,9:12:26.90:270,27,0	1/1:1,9:10:24.04:246,24,0	0/1:3,11:14:0.58:200,0,1	0/0:1,0:1:3:0,3,25	0/0:6,0:6:14.98:0,15,123	0/0:7,0:7:20.98:0,21,172	0/0:5,0:8:19.06:0,19,135	1/1:3,15:18:45.11:480,45,0	1/1:2,16:18:39.10:416,39,0	1/1:1,4:5:12.03:128,12,0
chr10	86399447	.	AT	A	1194.16	PASS	AB=1.000;AC=16;AF=0.320;AN=50;BaseQRankSum=-5.954;DP=413;FS=15.479;HRun=8;HaplotypeScore=43.9200;InbreedingCoeff=0.5350;MQ=46.43;MQ0=121;MQRankSum=-2.192;QD=8.01;ReadPosRankSum=-1.622;VQSLOD=-0.1719;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:18:38.88:39,0,107	0/0:3,0:3:8.73:0,9,49	0/0:16,0:6:13.66:0,14,90	0/0:11,0:3:5.88:0,6,51	0/0:23,1:22:27.02:0,27,309	0/0:24,0:17:6.02:0,6,72	0/0:13,0:12:15.05:0,15,181	1/1:7,13:12:17.97:164,18,0	0/0:16,0:11:0:0,0,0	0/1:12,0:8:5.15:5,0,37	0/0:5,0:4:2.92:0,3,17	0/0:23,0:15:3.01:0,3,34	0/0:15,0:12:14.94:0,15,145	0/0:12,0:7:3.01:0,3,36	./.	0/0:25,0:22:4.69:0,5,54	./.	0/0:15,0:6:6.02:0,6,72	1/1:6,12:8:17.88:145,18,0	1/1:1,15:14:36.06:347,36,0	1/1:3,10:5:3:29,3,0	0/0:5,0:5:3.01:0,3,36	0/0:6,1:7:3.01:0,3,36	./.	0/0:7,0:5:11.99:0,12,128	1/1:2,20:14:39.05:371,39,0	1/1:5,18:12:21.03:201,21,0	1/1:0,3:3:6.01:58,6,0
chr10	86399748	.	ATCC	A	294.01	PASS	AC=6;AF=0.125;AN=48;BaseQRankSum=5.631;DP=390;FS=13.620;HRun=0;HaplotypeScore=69.8310;InbreedingCoeff=0.9239;MQ=53.54;MQ0=15;MQRankSum=-5.433;QD=12.78;ReadPosRankSum=-1.355;VQSLOD=1.8442;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:10:18.06:0,18,442	0/0:6,0:6:18.06:0,18,442	0/0:12,0:4:12.04:0,12,282	0/0:21,0:10:27.09:0,27,644	0/0:23,0:21:60.21:0,60,1476	0/0:14,0:13:39.13:0,39,942	0/0:22,0:19:51.17:0,51,1217	./.	0/0:19,0:18:51.18:0,51,1256	0/0:12,0:11:33.11:0,33,812	0/0:12,0:10:18.53:0,19,443	0/0:18,0:18:54.19:0,54,1329	0/0:10,0:10:27.09:0,27,665	0/0:14,0:14:39.08:0,39,961	0/0:26,0:25:75.26:0,75,1814	0/0:21,0:20:60.21:0,60,1478	0/0:8,0:8:21.07:0,21,516	0/0:19,0:17:39.13:0,39,960	1/1:4,3:2:6.02:74,6,0	./.	./.	0/0:14,0:14:42.14:0,42,1003	0/0:19,0:19:54.19:0,54,1324	0/0:25,0:25:72.25:0,72,1775	0/0:22,0:22:66.23:0,66,1626	1/1:0,5:4:12.03:139,12,0	1/1:0,11:7:18.05:208,18,0	./.
chr10	86400166	.	AT	A	7803.42	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=14.792;DP=738;FS=1.986;HRun=8;HaplotypeScore=77.5996;InbreedingCoeff=0.9956;MQ=82.05;MQ0=0;MQRankSum=-2.807;QD=24.16;ReadPosRankSum=0.595;VQSLOD=5.5545;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,45:50:99:1275,133,0	1/1:2,5:7:12.02:116,12,0	0/0:20,0:20:51.14:0,51,592	0/0:25,0:25:58.21:0,58,665	0/0:31,0:31:78.22:0,78,921	0/0:23,0:23:66.18:0,66,776	0/0:25,0:25:69.21:0,69,833	1/1:5,27:32:78.12:753,78,0	0/0:23,0:23:66.20:0,66,787	1/1:3,36:39:99:985,102,0	1/1:2,12:14:33.05:319,33,0	0/0:35,0:35:96.27:0,96,1138	0/0:28,0:28:78.23:0,78,930	0/0:27,0:27:72.19:0,72,845	0/0:31,0:31:90.26:0,90,1076	0/0:38,0:38:99:0,105,1268	1/1:5,29:34:84.13:811,84,0	1/1:4,16:20:45.07:435,45,0	1/1:3,15:18:42.06:406,42,0	1/1:0,9:9:26.98:249,27,0	1/1:5,26:31:72.10:695,72,0	0/0:31,0:31:90.28:0,90,1087	0/0:25,0:25:69.19:0,69,811	0/0:26,0:26:69.19:0,69,810	0/0:27,0:27:75.23:0,75,906	1/1:3,28:31:84.11:804,84,0	1/1:1,22:23:63.10:608,63,0	1/1:3,12:15:36.05:348,36,0
chr10	86401034	.	TGAG	T	1401.37	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.178;DP=706;FS=5.585;HRun=0;HaplotypeScore=101.5924;InbreedingCoeff=0.9978;MQ=91.02;MQ0=0;MQRankSum=-2.524;QD=35.93;ReadPosRankSum=2.364;VQSLOD=4.5209;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:39:93.32:1496,93,0	0/0:9,0:9:27.09:0,27,591	0/0:22,0:22:60.21:0,60,1303	0/0:38,0:38:87.02:0,87,2105	0/0:19,0:19:48.16:0,48,1070	0/0:18,0:18:54.19:0,54,1205	0/0:20,0:20:57.20:0,57,1272	0/0:24,0:24:69.24:0,69,1544	0/0:32,0:32:93.30:0,93,2003	0/0:31,0:31:81.28:0,81,1792	0/0:21,0:21:57.20:0,57,1258	0/0:32,0:32:90.31:0,90,2008	0/0:30,0:30:72.23:0,72,1528	0/0:29,0:29:81.28:0,81,1803	0/0:29,0:29:87.30:0,87,1943	0/0:25,0:25:66.23:0,66,1475	0/0:26,0:26:78.27:0,78,1742	0/0:29,0:29:84.29:0,84,1875	0/0:24,0:24:66.23:0,66,1461	0/0:24,0:24:72.25:0,72,1591	0/0:52,0:52:99:0,148,3282	0/0:15,0:15:36.11:0,36,761	0/0:16,0:16:45.13:0,45,921	0/0:30,0:30:90.27:0,90,1963	0/0:21,0:21:60.21:0,60,1341	0/0:21,0:21:63.22:0,63,1405	0/0:20,0:19:57.20:0,57,1252	0/0:10,0:10:27.09:0,27,602
chr10	86402574	.	AG	A	11628.50	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=18.761;DP=691;FS=1.226;HRun=2;HaplotypeScore=87.3231;InbreedingCoeff=0.9994;MQ=77.55;MQ0=0;MQRankSum=-2.722;QD=36.45;ReadPosRankSum=-1.772;VQSLOD=4.5562;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:96.31:1246,96,0	1/1:0,12:12:33.10:428,33,0	0/0:19,0:19:53.92:0,54,701	0/0:11,0:11:21.93:0,22,331	0/0:23,0:23:66.20:0,66,964	0/0:20,0:20:60.20:0,60,897	0/0:33,0:33:96.31:0,96,1418	1/1:1,30:31:87.26:1099,87,0	0/0:25,0:25:72.23:0,72,1058	1/1:1,29:30:87.22:1071,87,0	1/1:0,16:16:48.16:623,48,0	0/0:31,0:31:87.29:0,87,1303	0/0:26,0:26:75.24:0,75,1103	0/0:29,0:29:84.28:0,84,1258	0/0:25,0:25:69.23:0,69,1033	0/0:28,0:28:84.28:0,84,1258	1/1:1,32:33:90.29:1166,90,0	1/1:0,20:20:60.20:779,60,0	1/1:1,15:16:45.15:582,45,0	1/1:0,17:17:45.15:584,45,0	1/1:0,37:37:99:1363,105,0	0/0:29,0:29:87.29:0,87,1294	0/0:27,0:27:75.24:0,75,1101	0/0:16,0:16:48.16:0,48,720	0/0:30,0:30:90.30:0,90,1348	1/1:0,31:31:93.30:1207,93,0	1/1:0,33:33:84.27:1090,84,0	1/1:0,10:10:30.10:389,30,0
chr10	86403290	.	TGCGCGCGC	T	3644.67	PASS	AB=0.870;AC=16;AF=0.296;AN=54;BaseQRankSum=2.482;DP=495;FS=17.920;HRun=0;HaplotypeScore=152.5779;InbreedingCoeff=0.0632;MQ=68.31;MQ0=0;MQRankSum=-3.815;QD=18.60;ReadPosRankSum=-1.827;VQSLOD=1.5993;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,2:12:9.03:178,9,0	0/1:6,1:7:2.47:238,0,2	0/0:19,0:15:24.91:0,25,424	0/1:10,0:6:14.46:14,0,63	0/0:13,0:13:33.07:0,33,1108	0/0:17,0:17:48.16:0,48,1744	0/0:27,0:27:78.22:0,78,2756	0/1:8,8:16:20.83:865,0,21	0/0:20,0:20:60.21:0,60,2341	0/1:22,3:25:99:440,0,197	0/1:12,1:10:77.81:78,0,117	0/0:35,0:35:96.25:0,96,3467	0/0:19,0:19:54.13:0,54,2033	0/0:18,0:18:48.16:0,48,1997	0/0:26,0:26:74.59:0,75,2869	0/0:18,0:18:54.15:0,54,1829	0/1:23,3:26:99:365,0,140	0/1:24,3:29:99:453,0,184	0/1:5,3:8:43.70:273,0,44	./.	1/1:16,3:18:3.01:50,3,0	0/0:14,0:14:36.12:0,36,1428	0/0:13,0:13:36.12:0,36,1258	0/0:40,0:40:99:0,111,4147	0/0:15,0:15:42.11:0,42,1468	0/1:16,0:16:99:363,0,354	0/1:10,2:12:74.49:245,0,74	1/1:3,0:2:3.01:84,3,0
chr10	86403292	.	C	CGT	909.83	PASS	AB=0.953;AC=17;AF=0.315;AN=54;BaseQRankSum=9.024;DP=487;FS=2.829;HRun=0;HaplotypeScore=111.6709;InbreedingCoeff=0.5052;MQ=65.57;MQ0=0;MQRankSum=-5.005;QD=5.32;ReadPosRankSum=-3.241;VQSLOD=2.5918;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:6.87:49,7,0	1/1:7,0:7:5.38:47,5,0	0/0:16,0:12:16.85:0,17,182	0/0:12,0:6:6.59:0,7,34	0/0:13,0:13:32.94:0,33,383	0/0:17,0:17:48.10:0,48,649	0/0:29,0:29:78.16:0,78,1057	1/1:15,0:15:12.63:128,13,0	0/0:20,0:20:59.52:0,60,808	1/1:19,5:24:33.19:361,33,0	0/1:12,2:11:12.36:84,0,12	0/0:35,0:35:96.09:0,96,1257	0/0:21,0:21:54.08:0,54,694	0/0:17,0:17:48.11:0,48,680	0/0:27,0:27:75.18:0,75,1065	0/0:20,0:20:54.09:0,54,710	0/1:21,3:24:19.06:186,0,19	0/1:29,0:29:58.18:58,0,87	1/1:8,0:8:7.83:65,8,0	./.	1/1:16,0:15:3:25,3,0	0/0:13,0:13:36.08:0,36,494	0/0:12,0:12:27.39:0,27,461	0/0:42,0:41:99:0,111,1484	0/0:15,0:15:40.30:0,40,519	0/1:16,0:16:32.04:68,0,32	0/1:10,0:10:0.51:12,0,1	0/0:2,0:1:0.47:0,0,1
chr10	86407387	.	TTGCCCAGG	T	5280.64	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.309;DP=704;FS=4.410;HRun=0;HaplotypeScore=175.0279;InbreedingCoeff=0.9942;MQ=82.64;MQ0=0;MQRankSum=-11.720;QD=42.59;ReadPosRankSum=-0.356;VQSLOD=4.4211;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,28:39:63.22:1681,63,0	1/1:1,6:7:15.05:396,15,0	0/0:15,0:15:42.12:0,42,1397	0/0:27,0:27:39.11:0,39,1308	0/0:23,0:23:39.13:0,39,1658	0/0:22,0:22:60.21:0,60,2427	0/0:34,0:34:84.29:0,84,3557	0/0:23,0:23:54.18:0,54,2212	0/0:30,0:30:78.27:0,78,3222	1/1:11,19:30:60.17:1429,60,0	1/1:3,10:13:18.06:484,18,0	0/0:39,0:39:99:0,108,4104	0/0:29,0:29:75.26:0,75,3147	0/0:19,0:19:48.16:0,48,1967	0/0:21,0:21:54.19:0,54,2267	0/0:30,0:30:84.29:0,84,3554	1/1:3,16:19:24.08:647,24,0	1/1:4,12:16:24.08:643,24,0	0/0:20,0:20:48.14:0,48,1695	0/0:19,0:19:39.13:0,39,1639	0/0:70,0:70:99:0,181,6842	0/0:17,0:17:36.12:0,36,1509	0/0:21,0:21:42.14:0,42,1742	0/0:34,0:33:93.32:0,93,3907	0/0:24,0:24:63.20:0,63,2587	0/0:26,0:26:57.19:0,57,2260	0/0:22,0:22:63.18:0,63,2364	0/0:14,0:14:33.11:0,33,1350
chr10	86409404	.	G	GC	2451.93	PASS	AC=24;AF=0.444;AN=54;BaseQRankSum=6.204;DP=352;FS=0.480;HRun=7;HaplotypeScore=48.5783;InbreedingCoeff=0.9345;MQ=72.52;MQ0=0;MQRankSum=-2.836;QD=15.42;ReadPosRankSum=0.917;VQSLOD=3.0807;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:27:30.09:362,30,0	1/1:1,5:6:9.02:109,9,0	0/0:16,0:17:30.37:0,30,265	0/0:5,0:5:9.01:0,9,87	0/0:4,0:4:12.02:0,12,116	0/0:13,0:13:36.06:0,36,348	0/0:20,0:20:50.30:0,50,473	1/1:5,0:10:10.76:57,11,0	0/0:11,0:11:24:0,24,219	1/1:0,5:5:15.01:166,15,0	1/1:1,7:8:14.96:179,15,0	0/0:26,0:26:64.56:0,65,573	0/0:8,0:8:24.04:0,24,232	0/0:21,0:21:34.33:0,34,392	0/0:17,0:17:51.06:0,51,484	0/0:9,0:9:27.04:0,27,258	1/1:1,31:32:69.21:833,69,0	1/1:1,18:19:39.12:471,39,0	1/1:3,0:7:14.35:78,14,0	1/1:1,0:3:5.75:29,6,0	1/1:5,3:21:24.38:141,24,0	0/0:7,0:7:12.02:0,12,116	0/0:3,0:3:9.01:0,9,87	0/0:19,0:19:50.82:0,51,475	0/0:13,0:13:36.05:0,36,348	1/1:2,2:9:20.36:145,20,0	1/1:4,0:12:19.89:98,20,0	./.
chr10	86412239	.	A	AC	1292.96	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-4.143;DP=470;FS=1.171;HRun=8;HaplotypeScore=59.8317;InbreedingCoeff=0.8944;MQ=75.99;MQ0=1;MQRankSum=1.329;QD=15.77;ReadPosRankSum=1.231;VQSLOD=3.6244;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,20:32:25.79:391,26,0	1/1:0,1:1:3.01:35,3,0	0/0:20,0:18:28.50:0,28,274	0/0:21,0:16:0.13:0,0,133	0/0:13,0:13:27:0,27,242	0/0:15,0:15:44.98:0,45,397	0/0:27,0:27:52.59:0,53,506	0/0:26,0:27:64.92:0,65,473	0/0:19,0:19:54:0,54,483	1/1:2,9:11:24.03:255,24,0	1/1:2,5:7:14.91:139,15,0	0/0:13,0:13:35.98:0,36,316	0/0:12,0:12:33.02:0,33,302	0/0:14,0:14:38.98:0,39,349	0/0:20,0:20:54:0,54,486	0/0:17,0:17:30:0,30,272	1/1:9,21:31:57:637,57,0	0/0:26,0:26:72.71:0,73,629	0/0:18,0:18:38.51:0,39,337	0/0:10,0:11:26.05:0,26,224	0/0:21,0:21:62.32:0,62,529	0/0:10,0:10:30.01:0,30,269	0/0:12,0:12:33.01:0,33,298	0/0:13,0:13:32.96:0,33,287	0/0:12,0:12:33:0,33,291	0/0:19,0:20:55.05:0,55,461	0/0:10,0:10:26.69:0,27,230	0/0:14,0:15:38.86:0,39,343
chr10	86413683	.	A	ACC	2962.26	PASS	AC=26;AF=0.481;AN=54;BaseQRankSum=-6.670;DP=390;FS=8.645;HRun=8;HaplotypeScore=49.8974;InbreedingCoeff=0.9076;MQ=75.34;MQ0=1;MQRankSum=0.033;QD=16.28;ReadPosRankSum=-1.881;VQSLOD=0.0346;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,8:17:15.05:238,15,0	1/1:1,0:2:3.01:44,3,0	0/0:8,0:8:23.98:0,24,249	0/0:9,0:10:11.99:0,12,125	0/0:7,0:7:18.05:0,18,199	0/0:15,0:15:42.11:0,42,467	0/0:28,0:28:72.11:0,72,772	1/1:3,8:17:25.44:210,25,0	0/0:14,0:14:33.08:0,33,366	1/1:0,3:3:9.03:143,9,0	1/1:1,5:6:9.03:142,9,0	0/0:24,0:24:57.13:0,57,626	0/0:16,0:16:39.10:0,39,434	0/0:22,0:22:63.17:0,63,701	0/0:19,0:19:48.09:0,48,526	0/0:9,0:9:24.05:0,24,258	1/1:5,15:20:24.55:382,25,0	1/1:5,9:14:23.84:381,24,0	1/1:2,8:11:26.53:339,27,0	1/1:7,0:8:14.52:171,15,0	1/1:14,29:46:43.81:635,44,0	./.	0/0:9,0:9:24.05:0,24,266	0/0:22,0:22:57.13:0,57,626	0/0:4,0:4:6:0,6,67	1/1:4,5:9:12.04:190,12,0	1/1:7,8:15:4.82:37,5,0	1/1:1,10:12:18.06:267,18,0
chr10	86413868	.	A	AC	1622.52	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-7.255;DP=596;FS=6.087;HRun=7;HaplotypeScore=60.3354;InbreedingCoeff=0.9751;MQ=71.09;MQ0=0;MQRankSum=-0.916;QD=24.96;ReadPosRankSum=0.416;VQSLOD=4.0214;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,141,1345	1/1:2,4:6:12.04:145,12,0	0/0:15,0:15:18.71:0,19,194	0/0:14,0:14:16.66:0,17,217	0/0:20,0:20:54.09:0,54,521	0/0:11,0:11:30.04:0,30,284	0/0:38,0:38:96.09:0,96,913	0/0:27,0:27:57.07:0,57,546	0/0:15,0:15:45.06:0,45,428	1/1:3,10:13:30.09:359,30,0	1/1:0,9:9:18.06:217,18,0	0/0:35,0:35:81.11:0,81,781	0/0:17,0:17:48.06:0,48,458	0/0:32,0:32:88.38:0,88,841	0/0:16,0:16:42.07:0,42,405	0/0:19,0:19:51.06:0,51,487	1/1:5,32:37:64.44:1058,64,0	0/0:23,0:23:63.10:0,63,607	0/0:16,0:16:36.05:0,36,348	0/0:11,0:11:30.04:0,30,289	0/0:35,0:35:80.37:0,80,934	0/0:18,0:18:47.96:0,48,433	0/0:13,0:13:39.06:0,39,376	0/0:36,0:36:99:0,102,966	0/0:18,0:18:45.03:0,45,421	0/0:15,0:15:45.06:0,45,430	0/0:28,0:28:81.13:0,81,781	0/0:4,0:4:12.02:0,12,116
chr10	86414374	.	CCT	C	331.02	PASS	AB=0.949;AC=8;AF=0.143;AN=56;BaseQRankSum=7.971;DP=425;FS=25.164;HRun=0;HaplotypeScore=72.3531;InbreedingCoeff=0.0266;MQ=72.58;MQ0=1;MQRankSum=-0.639;QD=2.81;ReadPosRankSum=4.000;VQSLOD=-0.1600;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:20.88:21,0,208	0/0:9,0:9:9.24:0,9,91	0/0:22,0:21:51.39:0,51,662	0/0:21,0:15:30.82:0,31,444	0/1:5,0:5:3.74:4,0,51	0/0:20,0:20:24.82:0,25,509	0/0:22,0:22:48.12:0,48,672	0/0:14,0:14:32.97:0,33,314	0/0:11,0:11:30.38:0,30,351	0/0:22,0:22:11.60:0,12,264	0/1:5,0:5:12.72:13,0,14	0/0:26,0:26:41.82:0,42,572	0/0:10,0:10:16.44:0,16,303	0/0:17,0:17:44.27:0,44,438	0/0:18,0:18:49.54:0,50,466	0/1:22,1:23:8.40:8,0,474	0/1:26,6:32:51.14:254,0,51	0/1:22,3:24:23.45:136,0,23	0/0:9,0:9:20.05:0,20,156	1/1:4,0:4:2.50:19,2,0	0/0:21,0:21:8.27:0,8,222	0/0:4,0:4:12.02:0,12,155	0/0:4,0:4:6:0,6,63	0/0:22,0:22:55.59:0,56,601	0/0:15,0:15:33.25:0,33,350	0/0:11,0:11:14.06:0,14,138	0/0:7,0:7:10.32:0,10,158	0/0:2,0:2:6.02:0,6,72
chr10	86414376	.	TCC	T	1867	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=0.624;DP=425;FS=0.000;HRun=12;HaplotypeScore=67.6713;InbreedingCoeff=0.6718;MQ=71.47;MQ0=1;MQRankSum=-0.035;QD=15.43;ReadPosRankSum=6.654;VQSLOD=2.0384;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,13:23:30.01:305,30,0	1/1:4,4:8:2.94:30,3,0	0/0:22,0:21:48.12:0,48,598	0/0:20,0:14:20.98:0,21,334	0/1:5,0:5:18.27:18,0,38	0/0:19,0:19:29.19:0,29,280	0/0:21,0:22:46.63:0,47,546	0/0:14,0:15:4.78:0,5,49	0/0:13,0:13:30.55:0,31,259	1/1:10,12:22:30:305,30,0	1/1:2,4:6:11.99:122,12,0	0/0:23,0:25:39.02:0,39,361	0/0:9,0:10:29:0,29,263	0/0:17,0:17:35.53:0,36,375	0/0:17,0:18:38.53:0,39,452	0/0:18,0:23:8.77:0,9,354	1/1:12,18:32:68.54:708,69,0	1/1:6,17:25:59.31:553,59,0	0/0:7,0:8:4.90:0,5,125	0/0:4,0:4:1.53:0,2,4	0/0:20,0:21:25.39:0,25,208	0/0:4,0:4:9.01:0,9,99	0/0:5,0:5:2.99:0,3,25	0/0:23,0:23:37.52:0,38,347	0/0:13,0:14:21.51:0,22,248	0/0:11,0:11:6.01:0,6,71	0/0:7,0:8:0.90:0,1,86	0/0:1,0:2:5.99:0,6,65
chr10	86415863	.	AGTAG	A	971.96	PASS	AB=0.992;AC=20;AF=0.357;AN=56;BaseQRankSum=6.165;DP=815;FS=19.149;HRun=0;HaplotypeScore=173.4181;InbreedingCoeff=0.5667;MQ=63.82;MQ0=3;MQRankSum=-1.192;QD=3.01;ReadPosRankSum=-2.631;VQSLOD=0.9604;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:38:70.59:71,0,136	0/0:9,0:9:1.54:0,2,4	0/0:27,0:18:23.60:0,24,282	0/0:27,0:20:21.04:0,21,259	0/0:17,0:17:39.06:0,39,600	0/0:29,0:29:62.21:0,62,1058	0/0:16,0:16:39.07:0,39,524	1/1:36,0:33:11.48:89,11,0	0/0:40,0:40:93.24:0,93,1561	0/1:30,1:31:19.33:52,0,19	1/1:15,0:15:12.18:121,12,0	0/0:49,0:49:99:0,102,1989	0/0:34,0:34:73.47:0,73,1306	0/0:31,0:31:28.92:0,29,1072	0/0:47,0:47:99:0,114,2092	0/0:48,0:48:99:0,120,1969	1/1:22,0:22:10.19:106,10,0	0/1:24,0:26:17.71:18,0,33	1/1:27,0:27:13.68:160,14,0	1/1:27,1:28:16.65:172,17,0	0/1:26,0:26:23.98:24,0,251	0/0:28,0:28:63.64:0,64,1082	0/0:27,0:27:56.86:0,57,1086	0/0:32,0:32:87.26:0,87,1478	0/0:30,0:30:74.27:0,74,1335	1/1:32,0:32:4.25:156,4,0	1/1:31,3:34:6.40:153,6,0	1/1:8,0:8:0.71:39,1,0
chr10	86415891	.	GATAC	G	857.76	PASS	AB=1.000;AC=19;AF=0.380;AN=50;BaseQRankSum=9.689;DP=817;FS=8.077;HRun=0;HaplotypeScore=184.8511;InbreedingCoeff=0.6606;MQ=55.03;MQ0=40;MQRankSum=-0.068;QD=2.89;ReadPosRankSum=-1.854;VQSLOD=1.8431;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:5.75:0,6,136	0/0:11,0:11:0.47:0,0,1	./.	./.	0/0:23,0:23:36.09:0,36,533	0/0:31,1:32:17.46:0,17,1040	0/0:15,0:14:18.03:0,18,253	./.	0/0:39,0:39:48.16:0,48,887	1/1:39,0:39:19.16:154,19,0	1/1:14,0:14:6.77:71,7,0	0/0:53,0:53:28.17:0,28,1179	0/0:34,0:34:17.48:0,17,1054	0/0:25,0:25:30.09:0,30,548	0/0:49,0:49:69.19:0,69,1244	0/1:50,0:50:16.88:17,0,1156	1/1:17,0:17:5.99:64,6,0	0/1:19,0:18:8.02:8,0,75	1/1:28,0:25:15.96:170,16,0	1/1:23,0:23:10.50:131,10,0	0/1:27,0:26:6.12:6,0,205	0/0:30,0:30:60.15:0,60,1075	0/0:22,0:22:39.09:0,39,708	0/0:34,0:34:29.54:0,30,548	0/0:35,3:38:20.51:0,21,1178	1/1:33,0:32:14.98:191,15,0	1/1:30,0:30:11.34:135,11,0	1/1:17,0:17:7.25:91,7,0
chr10	86416766	.	TCCCACCCAC	T	1427.57	PASS	AC=16;AF=0.320;AN=50;BaseQRankSum=5.134;DP=164;FS=2.016;HRun=0;HaplotypeScore=47.8594;InbreedingCoeff=0.7707;MQ=82.51;MQ0=0;MQRankSum=-4.848;QD=38.58;ReadPosRankSum=-0.500;VQSLOD=3.0349;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:27.09:0,27,1269	1/1:1,1:2:3.01:87,3,0	0/0:11,0:11:21.07:0,21,622	0/0:8,0:7:18.06:0,18,700	0/0:7,0:7:21.07:0,21,948	0/0:8,0:8:24.08:0,24,1075	0/0:5,0:5:3:0,3,25	1/1:3,4:7:12.02:268,12,0	0/0:5,0:5:12.04:0,12,564	1/1:2,4:6:12.03:286,12,0	1/1:0,1:1:3.01:85,3,0	0/0:10,0:10:24.08:0,24,922	0/0:5,0:5:12.04:0,12,489	0/0:5,0:5:12.04:0,12,549	0/0:10,0:10:24.06:0,24,890	0/0:7,0:7:15.05:0,15,647	./.	0/0:5,0:5:15.04:0,15,497	1/1:3,2:5:6.02:174,6,0	1/1:2,3:5:12.04:347,12,0	./.	0/0:4,0:4:12.04:0,12,522	0/0:5,0:5:9.03:0,9,395	0/0:3,0:3:6.02:0,6,230	0/0:6,0:6:15.05:0,15,637	./.	1/1:7,2:9:6.02:174,6,0	1/1:0,2:2:6.02:174,6,0
chr10	86418856	.	C	CGTGT	130.66	PASS	AB=1.000;AC=15;AF=0.469;AN=32;BaseQRankSum=-0.361;DP=597;FS=20.225;HRun=0;HaplotypeScore=122.8478;InbreedingCoeff=0.3560;MQ=57.29;MQ0=11;MQRankSum=0.194;QD=0.71;ReadPosRankSum=-3.633;VQSLOD=0.0529;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:0:0,0,0	./.	./.	./.	1/1:12,0:12:2.99:23,3,0	0/0:28,0:28:2.58:0,3,28	0/0:29,0:28:5.46:0,5,40	./.	0/0:19,0:18:12.02:0,12,141	1/1:20,0:19:4.43:19,4,0	1/1:7,0:7:2.99:24,3,0	./.	0/1:24,0:23:16.10:16,0,34	0/0:20,0:20:2.79:0,3,45	./.	0/0:25,0:25:5.62:0,6,63	1/1:25,0:24:2.88:16,3,0	1/1:24,12:41:3.48:71,3,0	./.	./.	./.	1/1:17,0:17:6.01:73,6,0	0/1:14,0:14:0:0,0,0	0/0:41,0:41:5.35:0,5,57	./.	0/0:22,0:21:4.16:0,4,33	./.	./.
chr10	86422249	.	A	AGG	11316.91	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-15.029;DP=620;FS=1.466;HRun=5;HaplotypeScore=66.9758;InbreedingCoeff=0.9974;MQ=80.43;MQ0=1;MQRankSum=-1.866;QD=39.43;ReadPosRankSum=1.173;VQSLOD=4.3434;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,30:36:72.25:1253,72,0	1/1:1,5:6:15.05:255,15,0	0/0:16,0:16:36.04:0,36,421	0/0:18,0:18:24.74:0,25,374	0/0:14,0:14:36.11:0,36,456	0/0:17,0:17:36.09:0,36,445	0/0:33,0:33:93.19:0,93,1119	1/1:4,25:29:72.11:1054,72,0	0/0:17,0:17:51.16:0,51,640	1/1:0,14:14:42.14:734,42,0	1/1:0,10:10:30.10:523,30,0	0/0:32,0:32:87.23:0,87,1068	0/0:20,0:20:51.14:0,51,634	0/0:25,0:25:69.20:0,69,863	0/0:31,0:31:84.27:0,84,1066	0/0:23,0:23:66.20:0,66,826	1/1:6,22:28:57.20:997,57,0	1/1:1,22:23:60.21:1049,60,0	1/1:4,13:18:42.11:667,42,0	1/1:2,11:13:33.02:511,33,0	1/1:2,43:46:99:1835,105,0	0/0:19,0:19:57.17:0,57,713	0/0:19,0:19:54.15:0,54,660	0/0:27,0:27:72.19:0,72,886	0/0:22,0:22:60.19:0,60,757	1/1:7,14:21:48.16:815,48,0	1/1:2,19:21:45.15:785,45,0	1/1:3,19:21:48.16:839,48,0
chr10	86423299	.	GAAAAA	G	5113.03	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=8.163;DP=515;FS=0.415;HRun=13;HaplotypeScore=98.5077;InbreedingCoeff=0.9768;MQ=56.21;MQ0=8;MQRankSum=-3.817;QD=34.78;ReadPosRankSum=4.162;VQSLOD=3.8942;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:30:58.72:0,59,1185	0/0:6,0:7:21.07:0,21,518	0/0:9,0:6:15.05:0,15,375	0/0:4,0:2:6.02:0,6,135	0/0:19,0:20:51.17:0,51,1320	0/0:20,0:23:60.21:0,60,1499	0/0:11,0:11:30.10:0,30,802	1/1:4,10:14:30.04:503,30,0	0/0:12,0:17:45.15:0,45,1083	0/0:25,0:28:72.24:0,72,1715	0/0:17,0:14:24.08:0,24,619	0/0:23,0:23:54.19:0,54,1419	0/0:8,0:9:24.08:0,24,537	0/0:20,0:21:54.19:0,54,1429	0/0:18,0:19:45.14:0,45,1093	0/0:26,0:27:75.25:0,75,1998	0/0:36,0:40:96.32:0,96,2448	1/1:2,11:11:27.09:448,27,0	1/1:3,18:21:51.08:793,51,0	1/1:3,15:18:36.06:601,36,0	1/1:0,13:13:21.06:360,21,0	0/0:9,0:10:21.07:0,21,566	0/0:15,0:18:47.95:0,48,1180	0/0:18,0:19:40.02:0,40,1021	0/0:13,0:15:36.11:0,36,874	1/1:6,20:26:60.15:1026,60,0	1/1:6,19:25:51.05:872,51,0	1/1:4,13:14:30.08:512,30,0
chr10	86423650	.	T	TGA	10381.36	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-8.608;DP=662;FS=7.820;HRun=0;HaplotypeScore=96.8405;InbreedingCoeff=0.9952;MQ=79.53;MQ0=0;MQRankSum=-0.543;QD=47.19;ReadPosRankSum=-0.785;VQSLOD=5.4524;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.32:0,96,1343	0/0:6,0:6:15.05:0,15,205	0/0:20,0:20:42.93:0,43,639	0/0:18,0:18:34.38:0,34,496	0/0:15,0:15:39.13:0,39,546	0/0:16,0:16:45.13:0,45,612	0/0:32,0:32:96.32:0,96,1344	1/1:2,22:24:66.21:1154,66,0	0/0:14,0:14:42.14:0,42,587	0/0:24,0:24:72.24:0,72,994	0/0:10,0:9:18.06:0,18,251	0/0:36,0:36:99:0,99,1384	0/0:14,0:14:39.13:0,39,546	0/0:33,0:33:99:0,99,1361	0/0:28,0:28:78.26:0,78,1090	0/0:26,0:26:75.22:0,75,1016	0/0:26,0:26:65.36:0,65,866	1/1:1,35:37:99:1837,102,0	1/1:1,33:36:99:1779,103,0	1/1:1,7:8:21.07:378,21,0	1/1:6,53:60:99:2593,144,0	0/0:24,0:24:69.23:0,69,966	0/0:16,0:16:45.15:0,45,623	0/0:38,0:38:99:0,114,1574	0/0:13,0:13:36.11:0,36,479	1/1:4,21:25:63.22:1135,63,0	1/1:2,14:17:45.15:805,45,0	1/1:0,13:13:39.13:702,39,0
chr10	86423675	.	C	CAGCGAGGG	3762.94	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=1.710;DP=627;FS=2.276;HRun=0;HaplotypeScore=195.4832;InbreedingCoeff=0.9804;MQ=80.40;MQ0=0;MQRankSum=-6.794;QD=94.07;ReadPosRankSum=0.205;VQSLOD=4.2253;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,3415	1/1:0,3:4:9.03:394,9,0	0/0:15,0:15:33.97:0,34,671	0/0:24,0:23:56.92:0,57,1219	0/0:18,0:18:51.18:0,51,1542	0/0:17,0:17:51.15:0,51,1467	0/0:32,0:32:96.32:0,96,2723	0/0:29,0:29:84.26:0,84,2220	0/0:16,0:16:48.15:0,48,1372	1/1:0,6:10:30.08:959,30,0	1/1:0,7:8:18.06:799,18,0	0/0:31,0:31:93.31:0,93,2621	0/0:17,0:17:51.14:0,51,1412	0/0:31,0:31:90.31:0,90,2685	0/0:28,0:28:84.27:0,84,2372	0/0:25,0:25:75.24:0,75,2165	1/1:2,15:17:39.09:1612,39,0	0/0:38,0:38:99:0,111,3255	0/0:22,0:22:66.19:0,66,1724	0/0:10,0:10:27.05:0,27,616	0/0:45,0:45:99:0,126,3737	0/0:22,0:22:66.20:0,66,1865	0/0:21,0:21:60.17:0,60,1678	0/0:35,0:35:99:0,102,2995	0/0:13,0:13:30.10:0,30,908	0/0:21,0:21:60.19:0,60,1619	0/0:25,0:25:69.22:0,69,1905	0/0:12,0:12:27.56:0,28,819
chr10	86424147	.	G	GC	6548.40	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-12.338;DP=620;FS=1.470;HRun=6;HaplotypeScore=60.3451;InbreedingCoeff=0.9833;MQ=80.17;MQ0=0;MQRankSum=-1.983;QD=31.48;ReadPosRankSum=-1.660;VQSLOD=4.7137;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:34:90.29:1131,90,0	0/0:12,0:12:36.05:0,36,358	0/0:22,0:22:42.14:0,42,426	0/0:16,0:16:32.64:0,33,262	0/0:17,0:17:42.09:0,42,428	0/0:19,0:19:51.12:0,51,520	0/0:36,0:37:98.25:0,98,985	1/1:3,24:27:69.22:867,69,0	0/0:27,0:27:75.17:0,75,765	0/0:19,0:19:48.11:0,48,489	0/0:16,0:16:48.11:0,48,487	0/0:37,0:37:99:0,99,1009	0/0:27,0:27:69.11:0,69,687	0/0:35,0:35:90.19:0,90,917	0/0:22,0:22:54.11:0,54,549	0/0:24,0:24:63.13:0,63,642	0/0:27,0:27:75.17:0,75,764	1/1:2,29:31:78.25:981,78,0	1/1:4,12:16:39.12:482,39,0	1/1:1,14:15:39.12:490,39,0	1/1:5,42:47:99:1379,111,0	0/0:13,0:13:33.07:0,33,336	0/0:14,0:14:42.09:0,42,428	0/0:14,0:14:36.04:0,36,357	0/0:14,0:14:39.09:0,39,398	1/1:0,16:16:48.14:590,48,0	1/1:5,14:19:45.14:553,45,0	1/1:1,2:3:6.02:75,6,0
chr10	86424370	.	ATCTGGCT	A	10002.88	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=15.236;DP=530;FS=64.543;HRun=0;HaplotypeScore=133.0572;InbreedingCoeff=0.9865;MQ=78.03;MQ0=0;MQRankSum=-14.763;QD=54.66;ReadPosRankSum=0.181;VQSLOD=2.3604;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:66.23:1654,66,0	1/1:0,3:4:12.04:316,12,0	0/0:18,0:18:51.18:0,51,1923	0/0:18,0:18:51.17:0,51,1916	0/0:25,0:25:72.25:0,72,2632	0/0:24,0:24:72.25:0,72,2857	0/0:31,0:31:93.24:0,93,3355	1/1:5,17:22:51.15:1171,51,0	0/0:24,0:24:66.21:0,66,2445	1/1:2,7:9:21.03:442,21,0	1/1:0,11:11:24.08:611,24,0	0/0:19,0:19:57.20:0,57,2241	0/0:30,0:30:87.30:0,87,3491	0/0:22,0:22:63.20:0,63,2326	0/0:33,0:33:99:0,99,3891	0/0:28,0:28:81.26:0,81,3108	1/1:6,19:25:36.12:927,36,0	1/1:2,12:14:33.11:870,33,0	1/1:3,13:15:36.08:704,36,0	1/1:2,11:13:24.08:632,24,0	1/1:2,15:17:33.11:823,33,0	0/0:20,0:20:60.21:0,60,2359	0/0:16,0:16:48.16:0,48,1729	0/0:20,0:20:60.21:0,60,2392	0/0:19,0:19:54.19:0,54,2085	1/1:0,10:10:30.09:688,30,0	1/1:0,13:13:36.12:927,36,0	1/1:0,3:3:9.03:237,9,0
chr10	86424986	.	GGT	G	2113.98	PASS	AB=0.908;AC=16;AF=0.286;AN=56;BaseQRankSum=3.735;DP=249;FS=0.776;HRun=0;HaplotypeScore=43.3958;InbreedingCoeff=0.6747;MQ=78.00;MQ0=0;MQRankSum=0.342;QD=23.49;ReadPosRankSum=-0.894;VQSLOD=3.6386;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:42.13:0,42,674	0/0:3,0:3:8.93:0,9,85	0/0:19,0:17:23.47:0,23,315	0/0:22,0:19:43.84:0,44,588	0/0:5,0:5:5.95:0,6,68	0/1:10,1:11:14.07:14,0,296	0/0:11,0:11:21.07:0,21,351	1/1:3,11:14:33.08:394,33,0	0/0:7,0:7:15.05:0,15,250	0/0:7,0:7:15.04:0,15,226	0/0:5,0:5:12.04:0,12,199	0/0:3,0:3:9.03:0,9,145	0/0:2,0:2:6.02:0,6,100	0/0:5,0:5:12.04:0,12,198	0/0:8,0:8:24.08:0,24,399	0/1:8,1:9:17.01:17,0,254	0/0:18,0:18:42.14:0,42,699	0/0:8,0:8:15.05:0,15,250	1/1:0,2:2:6.01:63,6,0	1/1:1,2:3:6.02:76,6,0	1/1:4,27:31:81.26:1028,81,0	0/0:3,0:3:9.03:0,9,147	0/0:2,0:2:3.01:0,3,50	0/0:8,0:8:21.07:0,21,347	0/0:5,0:5:9.03:0,9,149	1/1:1,9:10:27.09:342,27,0	1/1:0,6:6:18.06:228,18,0	1/1:1,3:4:12.03:139,12,0
chr10	86425304	.	TC	T	4697.76	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=7.233;DP=433;FS=3.434;HRun=5;HaplotypeScore=50.6572;InbreedingCoeff=0.9139;MQ=76.76;MQ0=0;MQRankSum=-1.082;QD=30.50;ReadPosRankSum=0.478;VQSLOD=5.2679;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:48.16:0,48,656	1/1:0,2:2:6.02:68,6,0	0/0:10,0:10:14.37:0,14,199	0/0:19,0:18:30.06:0,30,422	0/0:8,0:8:18.06:0,18,246	0/0:17,0:17:51.17:0,51,695	0/0:31,0:31:84.23:0,84,1084	1/1:0,26:26:66.17:737,66,0	0/0:14,0:14:42.14:0,42,574	1/1:0,11:11:30.08:340,30,0	1/1:1,0:1:3:25,3,0	0/0:34,0:34:93.31:0,93,1261	0/0:21,0:21:63.16:0,63,812	0/0:19,0:19:57.17:0,57,744	0/0:13,0:13:33.11:0,33,448	0/0:16,0:16:48.16:0,48,655	1/1:1,26:27:78.22:885,78,0	0/0:24,0:24:69.23:0,69,943	1/1:2,9:11:30.08:339,30,0	1/1:0,5:5:9.02:102,9,0	1/1:4,42:46:99:1393,123,0	0/0:6,0:6:18.06:0,18,246	0/0:5,0:5:15.05:0,15,205	0/0:22,0:22:57.19:0,57,778	0/0:1,0:1:3.01:0,3,41	1/1:0,13:13:39.10:433,39,0	1/1:0,5:5:12.03:136,12,0	1/1:0,7:7:21.06:238,21,0
chr10	86426238	.	G	GGAGAGAGA	3156.78	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=3.904;DP=694;FS=0.599;HRun=0;HaplotypeScore=176.9373;InbreedingCoeff=0.9449;MQ=65.60;MQ0=5;MQRankSum=-7.367;QD=28.19;ReadPosRankSum=-2.113;VQSLOD=2.6648;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:50:47.45:1137,47,0	1/1:6,0:6:6.02:161,6,0	0/0:49,0:22:32.08:0,32,689	0/0:42,0:22:19.91:0,20,447	0/0:17,0:19:36.12:0,36,751	0/0:25,0:26:63.21:0,63,1511	0/0:26,0:29:69.24:0,69,1661	0/0:21,0:23:31.90:0,32,642	0/0:21,0:23:12.69:0,13,1078	1/1:10,4:17:28.85:736,29,0	1/1:3,9:13:18.06:691,18,0	0/0:20,0:22:45.15:0,45,1100	0/0:14,0:15:27.09:0,27,674	0/0:19,0:19:42.14:0,42,964	0/0:28,0:31:66.23:0,66,1656	0/0:32,0:32:54.18:0,54,1316	1/1:12,12:26:15.05:599,15,0	0/0:26,0:27:11.37:0,11,1231	0/0:15,0:18:24.08:0,24,464	0/0:15,0:15:24.04:0,24,511	0/0:31,0:31:45.15:0,45,1108	0/0:15,0:17:25.79:0,26,580	0/0:21,0:21:36.12:0,36,927	0/0:30,0:33:75.25:0,75,1713	0/0:16,0:18:27.09:0,27,598	0/0:35,0:39:37.48:0,37,1655	0/0:23,0:23:39.13:0,39,1004	0/0:7,0:7:12.04:0,12,309
chr10	86426451	.	TG	T	4721.70	PASS	AB=0.955;AC=26;AF=0.464;AN=56;BaseQRankSum=4.460;DP=612;FS=47.882;HRun=1;HaplotypeScore=76.3614;InbreedingCoeff=0.8273;MQ=65.57;MQ0=3;MQRankSum=-3.255;QD=16.17;ReadPosRankSum=-9.714;VQSLOD=0.9680;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:81.91:595,82,0	1/1:9,0:9:26.44:188,26,0	0/0:20,0:5:4.02:0,4,30	0/1:18,2:15:52.68:53,0,87	0/0:36,0:36:54.08:0,54,811	0/0:25,0:25:23.90:0,24,464	0/0:25,0:25:65.27:0,65,682	1/1:29,2:31:82.18:703,82,0	0/0:24,0:23:45.50:0,46,559	1/1:23,0:22:59.34:392,59,0	1/1:11,1:12:34.33:231,34,0	0/0:29,0:29:68.02:0,68,671	0/0:16,0:16:43.69:0,44,413	0/0:14,0:14:41.75:0,42,393	0/0:29,0:29:77.38:0,77,693	0/0:22,0:22:59.78:0,60,557	1/1:24,0:24:52.60:350,53,0	0/0:28,0:28:76.07:0,76,774	1/1:15,3:18:47.80:391,48,0	1/1:21,2:22:59.90:484,60,0	1/1:13,0:13:35.46:277,35,0	0/0:17,0:17:0.51:0,1,228	0/1:20,0:20:1.51:2,0,339	0/0:18,0:18:53.94:0,54,509	0/0:17,0:17:40.31:0,40,368	1/1:0,24:24:65:513,65,0	1/1:0,23:23:11.95:107,12,0	1/1:17,2:19:50.90:436,51,0
chr10	86430333	.	A	AAAT	2934.16	PASS	AB=0.882;AC=13;AF=0.232;AN=56;BaseQRankSum=10.931;DP=448;FS=0.000;HRun=0;HaplotypeScore=81.8857;InbreedingCoeff=0.8504;MQ=58.77;MQ0=4;MQRankSum=-8.784;QD=23.66;ReadPosRankSum=-3.885;VQSLOD=2.7638;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1877	0/0:6,0:6:18.06:0,18,294	0/0:8,0:4:5.86:0,6,35	0/0:15,0:4:11.42:0,11,62	0/0:21,0:21:54.08:0,54,730	0/0:21,0:21:63.20:0,63,1007	0/0:10,0:10:30.02:0,30,402	1/1:22,3:24:32.83:536,33,0	0/0:17,0:17:45.13:0,45,702	0/0:27,0:27:69.12:0,69,1040	0/0:11,0:11:27.09:0,27,433	0/0:14,0:14:36.07:0,36,533	0/0:9,0:9:21.07:0,21,358	0/0:10,0:10:27.08:0,27,435	0/0:14,0:14:25.32:0,25,388	0/0:14,0:14:42.10:0,42,612	0/0:31,0:31:93.18:0,93,1410	0/0:21,0:21:63.06:0,63,1004	1/1:18,3:20:47.31:641,47,0	1/1:13,3:16:36.01:452,36,0	1/1:6,3:9:22.82:256,23,0	0/0:3,0:3:9.02:0,9,126	0/0:3,0:3:9.03:0,9,153	0/0:13,0:13:36.10:0,36,561	0/0:15,0:14:36.07:0,36,469	0/1:13,2:14:66.31:311,0,66	1/1:14,3:16:35.78:386,36,0	1/1:18,3:20:33.10:542,33,0
chr10	86430341	.	T	TA	965.10	PASS	AB=0.852;AC=10;AF=0.179;AN=56;BaseQRankSum=10.013;DP=445;FS=3.382;HRun=9;HaplotypeScore=68.7005;InbreedingCoeff=0.1843;MQ=63.48;MQ0=2;MQRankSum=-6.234;QD=6.61;ReadPosRankSum=-4.262;VQSLOD=0.6411;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1364	0/0:6,0:6:15.05:0,15,186	0/0:9,0:7:3.31:0,3,87	0/1:17,0:5:4.86:5,0,29	0/0:17,0:17:42.02:0,42,474	0/0:21,0:21:62.68:0,63,747	0/0:15,0:15:45.12:0,45,540	0/1:19,6:25:80.13:155,0,80	0/0:15,0:15:39.10:0,39,467	0/0:21,0:21:57.17:0,57,696	0/0:12,0:12:33.10:0,33,399	0/0:13,0:13:39.12:0,39,480	0/0:10,0:10:27.07:0,27,322	0/0:9,0:9:24.08:0,24,298	0/0:13,0:13:33.08:0,33,383	0/0:14,0:14:39.11:0,39,482	0/0:33,0:33:96.22:0,96,1130	0/0:20,0:20:60.17:0,60,729	0/1:22,5:27:88.16:244,0,88	0/1:10,2:13:63.51:64,0,83	1/1:1,6:7:3.34:95,3,0	0/0:2,0:2:6.02:0,6,74	0/0:4,0:4:12.04:0,12,148	0/0:12,0:12:30.09:0,30,371	0/0:12,0:12:30.09:0,30,371	0/1:12,3:14:88.43:106,0,88	0/1:16,4:19:46.32:139,0,46	1/1:5,15:20:15.42:303,15,0
chr10	86431584	.	G	GA	1927.47	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=4.074;DP=546;FS=21.356;HRun=9;HaplotypeScore=92.4012;InbreedingCoeff=0.7264;MQ=62.53;MQ0=3;MQRankSum=1.409;QD=17.52;ReadPosRankSum=-2.196;VQSLOD=2.1008;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:46.89:0,47,433	1/1:1,5:6:15.04:166,15,0	0/1:21,0:15:8.48:8,0,137	0/0:16,0:5:4.68:0,5,36	0/0:28,0:28:80.97:0,81,703	0/0:17,0:17:50.99:0,51,442	0/0:18,0:18:50.99:0,51,442	0/0:38,0:37:57.76:0,58,305	0/0:9,0:9:26.99:0,27,234	1/1:2,23:25:66.15:715,66,0	1/1:6,18:24:2.38:446,2,0	0/0:18,0:18:47.99:0,48,417	0/0:17,0:17:44.99:0,45,390	0/0:22,1:23:14.79:0,15,357	0/0:19,0:19:44.97:0,45,387	0/0:21,0:21:59.97:0,60,518	1/1:9,25:34:49:744,49,0	0/0:21,0:21:59.99:0,60,521	0/0:22,0:20:36.41:0,36,194	0/0:15,0:15:34.13:0,34,154	0/0:7,0:7:1:0,1,22	0/0:17,0:17:43.99:0,44,389	0/0:13,0:13:35.99:0,36,312	0/0:19,0:19:50.98:0,51,442	0/0:17,0:17:14.80:0,15,355	0/0:32,0:32:63.42:0,63,311	0/0:20,0:20:23.64:0,24,101	0/0:7,0:7:9.96:0,10,48
chr10	86431590	.	AAAAC	A	4075.97	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.233;DP=538;FS=3.097;HRun=0;HaplotypeScore=112.0272;InbreedingCoeff=0.9548;MQ=63.04;MQ0=3;MQRankSum=-4.809;QD=29.54;ReadPosRankSum=-3.334;VQSLOD=2.7720;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:40.52:0,41,1166	0/0:7,0:7:9.03:0,9,147	0/0:18,0:13:16.85:0,17,294	0/0:17,0:7:16.67:0,17,186	0/0:28,0:28:72.22:0,72,1623	0/0:19,0:19:57.20:0,57,1323	0/0:17,0:17:51.14:0,51,1055	1/1:10,27:36:74.98:1095,75,0	0/0:9,0:9:24.05:0,24,455	0/0:25,0:25:60.17:0,60,1017	0/0:21,0:21:45.15:0,45,824	0/0:18,0:18:42.13:0,42,942	0/0:15,0:15:36.11:0,36,825	0/0:21,0:21:48.15:0,48,1013	0/0:15,0:15:39.13:0,39,926	0/0:24,0:24:66.15:0,66,1336	0/0:33,0:33:72.19:0,72,1200	0/0:22,0:22:48.12:0,48,1117	1/1:4,16:19:49.45:591,49,0	1/1:1,14:15:39.09:608,39,0	1/1:2,7:9:6.01:74,6,0	0/0:19,0:19:51.12:0,51,997	0/0:12,0:12:36.10:0,36,781	0/0:18,0:18:51.17:0,51,1131	0/0:18,0:18:45.11:0,45,923	1/1:6,25:31:62.07:1120,62,0	1/1:5,14:19:27.09:438,27,0	1/1:2,5:7:9.03:150,9,0
chr10	86431793	.	C	CTG	2186.02	PASS	AB=0.947;AC=15;AF=0.268;AN=56;BaseQRankSum=-4.532;DP=480;FS=7.221;HRun=0;HaplotypeScore=80.6348;InbreedingCoeff=0.8429;MQ=71.24;MQ0=0;MQRankSum=3.108;QD=17.35;ReadPosRankSum=-4.042;VQSLOD=1.9766;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:37:77.58:0,78,878	0/0:1,0:3:6.01:0,6,60	0/0:20,0:10:4.31:0,4,155	0/1:14,0:14:11.30:11,0,115	0/0:18,0:22:53.31:0,53,508	0/0:7,0:7:9.03:0,9,136	0/0:20,0:23:60.14:0,60,751	1/1:13,17:33:77.82:833,78,0	0/0:12,0:13:30.08:0,30,382	0/0:8,0:18:49.86:0,50,470	0/0:8,0:14:41.74:0,42,398	0/0:19,0:22:56.98:0,57,649	0/0:16,0:16:42.06:0,42,510	0/0:12,0:12:27.05:0,27,307	0/0:16,0:24:37.62:0,38,540	0/0:21,0:23:59.99:0,60,717	0/0:12,0:23:66.11:0,66,674	0/0:24,0:25:51.06:0,51,583	1/1:5,13:19:28.91:440,29,0	1/1:4,5:9:11.89:143,12,0	1/1:5,13:19:20.95:309,21,0	0/0:11,0:12:26.85:0,27,313	0/0:7,0:8:20.95:0,21,263	0/0:20,0:24:54.03:0,54,697	0/0:7,0:8:21.04:0,21,233	1/1:12,1:13:29.85:301,30,0	1/1:3,5:10:14.93:196,15,0	1/1:2,3:5:8.99:147,9,0
chr10	86431794	.	T	TG	1298.43	PASS	AB=0.969;AC=13;AF=0.232;AN=56;BaseQRankSum=1.551;DP=470;FS=2.893;HRun=0;HaplotypeScore=70.9950;InbreedingCoeff=0.5445;MQ=71.34;MQ0=0;MQRankSum=0.751;QD=9.34;ReadPosRankSum=-1.793;VQSLOD=2.8271;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:80.14:0,80,890	0/0:3,0:3:6:0,6,53	0/1:20,0:10:2.49:2,0,138	0/1:18,0:14:13.11:13,0,94	0/0:22,0:22:53.71:0,54,514	0/0:7,0:7:17.82:0,18,179	0/0:23,0:23:64.65:0,65,712	1/1:28,5:33:52:601,52,0	0/0:11,0:11:33.05:0,33,370	0/0:17,0:17:49.79:0,50,426	0/0:14,0:14:37.72:0,38,341	0/0:22,0:22:61.24:0,61,661	0/0:17,0:17:48.04:0,48,528	0/0:12,0:12:33.03:0,33,344	0/0:25,0:25:51.80:0,52,548	0/0:23,0:23:60.99:0,61,686	0/0:25,0:25:65.99:0,66,584	0/0:24,0:24:55.59:0,56,569	1/1:16,0:16:9.19:199,9,0	0/1:7,0:7:24.68:58,0,25	1/1:15,1:16:19.09:169,19,0	0/0:12,0:12:33.59:0,34,336	0/0:7,0:7:19.30:0,19,234	0/0:24,0:24:62.07:0,62,676	0/0:8,0:8:24.02:0,24,242	1/1:4,9:13:29.09:246,29,0	0/1:9,2:11:2.21:126,0,2	0/1:5,0:5:31.33:53,0,31
chr10	86432138	.	A	AG	3670.46	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=14.545;DP=594;FS=0.000;HRun=1;HaplotypeScore=123.9533;InbreedingCoeff=0.9933;MQ=69.15;MQ0=4;MQRankSum=-8.079;QD=15.89;ReadPosRankSum=-2.407;VQSLOD=2.9087;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,3:14:37.37:248,37,0	1/1:5,0:5:11.07:62,11,0	0/0:40,0:22:40.69:0,41,506	0/0:29,0:21:21.12:0,21,243	0/0:40,0:40:99:0,119,1461	0/0:21,0:21:63.20:0,63,814	0/0:12,0:12:36.10:0,36,441	1/1:25,0:25:66.07:410,66,0	0/0:21,0:21:63.20:0,63,798	1/1:28,1:29:69.93:474,70,0	1/1:19,0:19:50.91:261,51,0	0/0:12,0:12:36.07:0,36,435	0/0:15,0:15:42.10:0,42,502	0/0:19,0:19:51.12:0,51,602	0/0:25,0:25:72.19:0,72,879	0/0:27,0:27:75.22:0,75,933	1/1:23,0:23:45.31:250,45,0	0/0:22,0:22:56.59:0,57,408	1/1:20,0:19:52.47:330,52,0	1/1:21,2:23:64:443,64,0	1/1:14,1:15:33.93:234,34,0	0/0:14,0:14:42.14:0,42,543	0/0:15,0:15:34.94:0,35,469	0/0:27,0:27:75.22:0,75,941	0/0:23,0:23:69.19:0,69,855	1/1:27,2:30:77.63:474,78,0	1/1:20,0:20:56.48:381,56,0	1/1:8,0:8:19.66:103,20,0
chr10	86432139	.	GT	G	4934.54	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=15.052;DP=593;FS=2.410;HRun=9;HaplotypeScore=115.6955;InbreedingCoeff=0.9628;MQ=68.95;MQ0=4;MQRankSum=-9.133;QD=19.58;ReadPosRankSum=-0.050;VQSLOD=4.0448;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,7:14:21.27:229,21,0	1/1:1,3:5:0.62:69,1,0	0/0:42,0:22:26.74:0,27,326	0/0:27,0:20:17.19:0,17,181	0/0:40,0:40:99:0,102,1258	0/0:21,0:21:63.19:0,63,727	0/0:12,0:12:30.09:0,30,346	1/1:9,17:26:27.62:437,28,0	0/0:22,0:22:60.18:0,60,692	1/1:9,20:29:58.18:538,58,0	1/1:0,18:19:50.12:462,50,0	0/0:12,0:12:30.09:0,30,346	0/0:16,0:16:45.09:0,45,497	0/0:19,0:19:48.11:0,48,535	0/0:25,0:25:66.18:0,66,753	0/0:25,0:25:69.18:0,69,783	1/1:12,10:22:34.83:326,35,0	1/1:4,17:21:35.58:424,36,0	1/1:6,14:19:40.22:399,40,0	1/1:3,19:22:51.52:519,52,0	1/1:9,6:15:19.06:188,19,0	0/0:15,0:15:42.12:0,42,485	0/0:13,0:14:38.95:0,39,430	0/0:27,0:27:75.20:0,75,847	0/0:23,0:23:66.19:0,66,753	1/1:6,25:31:68.20:682,68,0	1/1:5,15:20:53.93:471,54,0	1/1:0,8:8:21.01:191,21,0
chr10	86432148	.	TG	T	1402.12	PASS	AB=0.984;AC=24;AF=0.429;AN=56;BaseQRankSum=16.122;DP=619;FS=7.385;HRun=1;HaplotypeScore=138.0933;InbreedingCoeff=0.6873;MQ=61.56;MQ0=8;MQRankSum=-8.789;QD=4.44;ReadPosRankSum=-1.828;VQSLOD=-0.4950;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:19.08:37,0,19	1/1:7,0:7:16.60:79,17,0	0/1:42,1:20:7.51:8,0,282	0/0:30,0:17:27.63:0,28,215	0/0:41,0:41:99:0,119,1431	0/0:22,0:22:66.17:0,66,791	0/0:13,0:13:39.07:0,39,438	1/1:29,0:27:13.81:116,14,0	0/0:22,0:22:66.12:0,66,765	1/1:26,2:28:1.43:146,1,0	1/1:25,0:25:43.27:229,43,0	0/0:11,0:11:32.11:0,32,363	0/0:16,0:16:48.11:0,48,557	0/0:18,0:18:54.11:0,54,625	0/0:23,0:23:69.16:0,69,827	0/0:24,0:24:69.15:0,69,842	1/1:27,1:28:13.29:191,13,0	0/1:22,1:23:46.88:50,0,47	1/1:21,0:20:15.23:86,15,0	1/1:22,0:22:45.64:187,46,0	1/1:13,0:12:17.66:82,18,0	0/0:17,0:17:48.08:0,48,561	0/0:17,0:17:44.93:0,45,519	0/0:26,0:26:78.15:0,78,910	0/0:23,0:23:66.16:0,66,818	1/1:33,0:33:47.55:218,48,0	0/1:21,0:21:7.05:113,0,7	1/1:8,0:8:17.60:71,18,0
chr10	86432155	.	G	GTTT	6324.01	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=16.615;DP=626;FS=4.508;HRun=7;HaplotypeScore=146.9075;InbreedingCoeff=0.9905;MQ=55.98;MQ0=7;MQRankSum=-11.781;QD=24.70;ReadPosRankSum=-5.259;VQSLOD=0.8351;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:13:21.79:166,22,0	1/1:8,0:9:22.37:203,22,0	0/0:39,0:18:13.02:0,13,347	0/0:32,0:15:15.17:0,15,209	0/0:41,0:41:99:0,120,1555	0/0:21,0:21:51.14:0,51,676	0/0:12,0:12:36.12:0,36,488	1/1:31,2:31:45.78:513,46,0	0/0:21,0:21:63.21:0,63,850	1/1:20,4:28:56.94:741,57,0	1/1:10,13:28:65.40:975,65,0	0/0:10,0:10:30.10:0,30,401	0/0:14,0:14:39.13:0,39,525	0/0:17,0:17:51.17:0,51,689	0/0:28,0:28:75.21:0,75,990	0/0:24,0:24:60.19:0,60,809	1/1:20,7:28:45.91:804,46,0	0/0:26,0:26:56.50:0,57,742	1/1:15,0:21:22.01:299,22,0	1/1:15,0:22:49.49:437,49,0	1/1:6,0:9:14.93:128,15,0	0/0:19,0:19:54.10:0,54,666	0/0:17,0:17:51.17:0,51,694	0/0:24,0:24:69.19:0,69,899	0/0:23,0:23:69.23:0,69,936	1/1:20,11:31:80.39:1153,80,0	1/1:6,2:21:51.53:501,52,0	1/1:7,4:11:27.04:404,27,0
chr10	86432162	.	TG	T	3639.82	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.420;DP=632;FS=1.406;HRun=1;HaplotypeScore=126.6212;InbreedingCoeff=0.9834;MQ=57.03;MQ0=9;MQRankSum=-12.884;QD=15.69;ReadPosRankSum=-4.515;VQSLOD=2.1912;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:9.36:0,9,157	1/1:8,0:8:21.53:139,22,0	0/0:37,2:19:12.77:0,13,375	0/0:34,2:14:13.73:0,14,190	0/0:42,0:42:99:0,102,1575	0/0:17,0:17:51.17:0,51,711	0/0:13,0:13:39.12:0,39,523	1/1:28,4:30:58.44:509,58,0	0/0:21,0:21:63.21:0,63,869	1/1:20,4:24:56.17:396,56,0	1/1:24,2:26:67.27:413,67,0	0/0:15,0:15:45:0,45,513	0/0:15,0:15:42.12:0,42,548	0/0:18,0:18:54.17:0,54,725	0/0:28,0:28:84.27:0,84,1152	0/0:24,0:24:72.18:0,72,927	1/1:24,5:29:66.87:452,67,0	0/0:27,0:27:76.48:0,76,926	1/1:20,1:20:43.93:268,44,0	1/1:20,3:23:57.11:381,57,0	1/1:8,0:7:17.09:93,17,0	0/0:20,0:20:56.12:0,56,737	0/0:20,0:20:60.16:0,60,782	0/0:25,0:25:74.88:0,75,968	0/0:27,0:27:81.20:0,81,1055	1/1:25,5:30:81.44:587,81,0	1/1:18,2:20:50.42:239,50,0	1/1:10,1:11:28.06:163,28,0
chr10	86433494	.	TTGTG	T	2522.82	PASS	AB=0.663;AC=14;AF=0.250;AN=56;BaseQRankSum=5.861;DP=685;FS=32.758;HRun=0;HaplotypeScore=117.4012;InbreedingCoeff=0.7839;MQ=65.40;MQ0=5;MQRankSum=-0.628;QD=13.94;ReadPosRankSum=0.743;VQSLOD=1.3679;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:50.80:0,51,960	0/0:1,0:6:7.98:0,8,34	0/0:36,0:15:20.99:0,21,295	0/0:46,0:26:35.60:0,36,519	0/0:14,0:14:30.10:0,30,706	0/0:18,0:20:38.77:0,39,726	0/0:33,0:36:71.56:0,72,1323	1/1:8,11:18:15.94:386,16,0	0/0:24,0:24:51.13:0,51,1104	0/0:6,0:21:41.99:0,42,235	0/0:6,0:13:16.47:0,16,74	0/0:31,0:32:71.95:0,72,1561	0/0:20,0:20:40.89:0,41,1019	0/0:30,0:30:69.19:0,69,1464	0/0:34,0:35:80.92:0,81,1626	0/0:32,0:35:65.70:0,66,1456	0/1:11,2:41:81.88:82,0,193	0/0:24,0:28:56.39:0,56,1059	0/1:10,5:14:12.64:112,0,13	1/1:4,10:15:24.03:345,24,0	1/1:20,26:46:24.61:705,25,0	0/0:12,0:12:24.08:0,24,580	0/0:16,0:16:39.07:0,39,845	0/0:36,0:37:96:0,96,2103	0/0:11,0:11:17.09:0,17,364	1/1:6,10:15:30.10:488,30,0	1/1:5,7:12:9.33:148,9,0	1/1:4,12:16:27.09:446,27,0
chr10	86436887	.	CG	C	11742.39	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=14.557;DP=747;FS=0.269;HRun=2;HaplotypeScore=77.1412;InbreedingCoeff=0.9998;MQ=78.65;MQ0=0;MQRankSum=-0.666;QD=37.28;ReadPosRankSum=0.025;VQSLOD=5.1862;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,47:47:99:1830,141,0	1/1:0,15:15:36.08:449,36,0	0/0:25,0:25:54.21:0,54,865	0/0:21,0:21:57.15:0,57,732	0/0:24,0:24:72.24:0,72,1070	0/0:30,0:30:90.30:0,90,1348	0/0:29,0:29:84.23:0,84,1210	1/1:0,32:32:96.29:1215,96,0	0/0:30,0:30:87.28:0,87,1280	1/1:1,26:27:75.24:974,75,0	1/1:0,13:13:39.12:497,39,0	0/0:29,0:29:84.27:0,84,1236	0/0:17,0:17:51.17:0,51,764	0/0:20,0:20:57.19:0,57,851	0/0:38,0:38:99:0,114,1688	0/0:36,0:36:99:0,99,1483	1/1:0,41:41:99:1558,120,0	0/0:29,0:29:81.27:0,81,1193	1/1:0,10:10:30.10:389,30,0	1/1:0,25:25:72.23:919,72,0	1/1:0,47:47:99:1749,135,0	0/0:28,0:28:75.25:0,75,1122	0/0:23,0:23:69.22:0,69,1012	0/0:30,0:30:90.27:0,90,1317	0/0:23,0:23:63.19:0,63,920	1/1:1,25:26:78.24:994,78,0	1/1:0,22:22:60.20:779,60,0	1/1:0,10:10:30.10:389,30,0
chr10	86436948	.	AAC	A	852.71	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.293;DP=742;FS=0.780;HRun=0;HaplotypeScore=102.2924;InbreedingCoeff=0.9840;MQ=78.71;MQ0=0;MQRankSum=-3.019;QD=27.51;ReadPosRankSum=3.254;VQSLOD=5.0212;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.22:0,81,1333	0/0:6,0:6:15.05:0,15,257	0/0:40,0:37:90.04:0,90,1376	0/0:28,0:27:49.86:0,50,750	0/0:32,0:32:87.27:0,87,1480	0/0:23,0:23:54.18:0,54,949	0/0:28,0:28:78.21:0,78,1279	0/0:40,0:40:99:0,111,1863	0/0:18,0:18:51.14:0,51,843	0/0:35,0:35:99:0,99,1626	0/0:16,0:16:48.15:0,48,786	0/0:26,0:26:75.26:0,75,1315	0/0:22,0:22:63.18:0,63,1039	0/0:24,0:24:69.20:0,69,1135	0/0:41,0:41:99:0,114,1870	0/0:25,0:25:69.21:0,69,1162	0/0:36,0:36:93.32:0,93,1642	1/1:1,30:31:69.23:948,69,0	0/0:24,0:24:69.21:0,69,1132	0/0:27,0:27:78.18:0,78,1241	0/0:35,0:35:93.25:0,93,1506	0/0:24,0:24:66.21:0,66,1125	0/0:17,0:17:45.13:0,45,754	0/0:24,0:24:69.16:0,69,1094	0/0:14,0:14:42.12:0,42,686	0/0:42,0:42:99:0,123,2108	0/0:26,0:25:75.23:0,75,1265	0/0:10,0:10:30.10:0,30,484
chr10	86437270	.	GCA	G	9622.34	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=14.567;DP=829;FS=2.010;HRun=0;HaplotypeScore=105.0258;InbreedingCoeff=0.9974;MQ=72.95;MQ0=1;MQRankSum=-6.391;QD=28.64;ReadPosRankSum=2.068;VQSLOD=6.2191;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,55:63:99:1678,129,0	1/1:1,9:10:24.08:311,24,0	0/0:29,0:25:49.81:0,50,744	0/0:26,0:26:56.92:0,57,847	0/0:25,0:25:69.24:0,69,1169	0/0:25,0:25:66.19:0,66,1057	0/0:41,0:41:93.32:0,93,1548	1/1:12,26:38:78.24:990,78,0	0/0:21,0:21:63.22:0,63,1058	1/1:7,24:31:75.24:972,75,0	1/1:1,12:13:30.08:390,30,0	0/0:40,0:40:74.52:0,75,1548	0/0:30,0:30:81.28:0,81,1360	0/0:33,0:33:87.27:0,87,1430	0/0:48,0:48:99:0,114,1939	0/0:44,0:44:99:0,117,1937	1/1:0,27:27:60.20:780,60,0	0/0:26,0:26:63.14:0,63,999	1/1:4,16:20:48.09:577,48,0	1/1:1,21:22:54.18:702,54,0	1/1:3,41:44:90.29:1170,90,0	0/0:25,0:25:75.24:0,75,1241	0/0:23,0:23:57.18:0,57,934	0/0:41,0:41:99:0,111,1821	0/0:16,0:16:45.15:0,45,755	1/1:2,22:24:66.20:841,66,0	1/1:2,31:32:78.25:1015,78,0	1/1:3,8:11:15.05:195,15,0
chr10	86438090	.	TC	T	15691.09	PASS	AB=0.832;AC=54;AF=0.964;AN=56;BaseQRankSum=-2.921;DP=685;FS=2.333;HRun=7;HaplotypeScore=86.2742;InbreedingCoeff=-0.0340;MQ=68.81;MQ0=2;MQRankSum=0.461;QD=22.91;ReadPosRankSum=2.131;VQSLOD=4.8528;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,31:38:84.17:851,84,0	1/1:3,5:8:18.04:183,18,0	0/1:11,1:9:6.16:54,0,6	0/1:17,4:19:26.62:108,0,27	1/1:2,16:18:48.10:489,48,0	1/1:2,16:18:45.10:459,45,0	1/1:2,22:24:60.14:612,60,0	1/1:10,23:33:66.13:673,66,0	1/1:3,31:34:81.18:826,81,0	1/1:3,13:16:39.09:397,39,0	1/1:3,8:11:23.84:215,24,0	1/1:9,30:39:90.20:918,90,0	1/1:6,20:26:54.12:551,54,0	1/1:2,30:32:84.19:857,84,0	1/1:5,38:43:99:1071,105,0	1/1:3,35:38:96.21:979,96,0	1/1:11,20:31:66.06:644,66,0	1/1:2,33:35:93.21:948,93,0	1/1:1,11:12:33.06:330,33,0	1/1:2,12:14:33.07:336,33,0	1/1:5,30:35:84.19:857,84,0	1/1:1,13:14:42.09:427,42,0	1/1:1,12:13:27.06:275,27,0	1/1:6,35:41:93.21:949,93,0	1/1:3,14:17:33.07:337,33,0	1/1:2,19:21:57.13:581,57,0	1/1:4,25:29:57.12:581,57,0	1/1:0,10:10:18.04:184,18,0
chr10	86438105	.	C	CA	3574.01	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=2.620;DP=697;FS=1.887;HRun=3;HaplotypeScore=130.6816;InbreedingCoeff=0.9939;MQ=71.17;MQ0=1;MQRankSum=-9.395;QD=32.49;ReadPosRankSum=-2.972;VQSLOD=2.1272;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,33:40:84.16:1161,84,0	1/1:2,6:8:24.08:334,24,0	0/0:18,0:14:19.31:0,19,239	0/0:20,0:19:47.97:0,48,496	0/0:15,0:15:45.14:0,45,539	0/0:18,0:18:48.15:0,48,575	0/0:33,0:33:84.26:0,84,1007	0/0:29,0:29:81.20:0,81,926	0/0:34,0:34:90.20:0,90,1050	1/1:2,20:22:57.18:781,57,0	1/1:1,11:12:28.59:337,29,0	0/0:37,0:37:99:0,102,1222	0/0:23,0:23:60.18:0,60,719	0/0:36,0:36:96.27:0,96,1130	0/0:45,0:45:99:0,120,1438	0/0:40,0:40:99:0,111,1320	1/1:3,25:28:69.23:962,69,0	0/0:36,0:36:99:0,99,1174	0/0:22,0:22:57.14:0,57,652	0/0:13,0:13:36.11:0,36,431	0/0:30,0:30:78.23:0,78,924	0/0:15,0:15:45.13:0,45,530	0/0:12,0:12:27.07:0,27,314	0/0:37,0:37:96.28:0,96,1141	0/0:15,0:15:33.07:0,33,381	0/0:21,1:22:18.17:0,18,633	0/0:28,0:28:75.08:0,75,829	0/0:8,0:8:18.06:0,18,215
chr10	86438903	.	GA	G	5165.82	PASS	AB=0.779;AC=23;AF=0.411;AN=56;BaseQRankSum=20.568;DP=870;FS=45.453;HRun=2;HaplotypeScore=149.3027;InbreedingCoeff=-0.6774;MQ=79.62;MQ0=0;MQRankSum=-15.453;QD=6.43;ReadPosRankSum=2.722;VQSLOD=-0.4391;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:39,29:66:99:616,0,1571	0/1:8,1:9:11.72:12,0,332	0/1:24,2:26:5.48:5,0,880	0/1:25,3:28:37.52:38,0,809	0/1:17,7:22:56.23:56,0,660	0/1:16,12:28:99:294,0,598	0/1:26,10:35:99:215,0,942	0/1:35,21:56:99:475,0,1251	0/1:22,12:34:99:298,0,807	0/1:16,6:22:99:167,0,612	0/1:11,3:13:2.69:3,0,458	0/1:32,9:39:99:122,0,1218	0/1:18,8:25:99:128,0,697	0/1:28,9:35:99:134,0,1114	0/1:33,33:63:99:796,0,1308	0/1:28,25:49:99:365,0,1090	0/1:27,26:52:99:684,0,982	0/1:15,15:30:99:248,0,519	0/1:32,5:36:53.24:53,0,1172	0/0:4,0:4:12.04:0,12,180	0/1:29,11:40:99:134,0,1048	0/0:10,2:11:24.08:0,24,359	0/0:8,1:9:4.14:0,4,293	0/1:36,11:47:99:286,0,1437	0/0:18,1:19:18.36:0,18,750	0/1:21,4:25:8.67:9,0,875	0/0:20,3:21:18.32:0,18,748	0/1:2,1:3:29.88:30,0,81
chr10	86438962	.	C	CAA	4463.27	PASS	AB=0.813;AC=20;AF=0.357;AN=56;BaseQRankSum=16.333;DP=692;FS=0.000;HRun=0;HaplotypeScore=149.8707;InbreedingCoeff=-0.5746;MQ=102.14;MQ0=0;MQRankSum=-10.111;QD=8.13;ReadPosRankSum=1.068;VQSLOD=4.3153;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:38,12:50:99:296,0,1614	0/0:4,0:4:9.03:0,9,131	0/1:39,4:43:99:211,0,1076	0/1:43,9:52:99:598,0,1021	0/0:11,1:12:33.11:0,33,537	0/1:13,6:19:99:156,0,551	0/1:21,4:25:80.70:81,0,894	0/1:37,8:45:99:266,0,1446	0/1:15,7:22:99:153,0,629	0/1:11,1:12:16.61:17,0,474	0/1:5,1:6:32.27:32,0,224	0/1:20,3:23:84.65:85,0,784	0/1:18,3:21:91.31:91,0,815	0/1:17,4:21:99:139,0,753	0/1:17,20:36:99:766,0,730	0/1:17,11:28:99:321,0,717	0/1:19,15:34:99:624,0,794	0/1:16,5:20:59.17:59,0,636	0/1:24,5:28:99:218,0,825	0/0:4,0:4:9.03:0,9,147	0/0:34,2:36:8.93:0,9,1558	0/1:6,3:9:29.21:29,0,270	0/0:16,0:16:45.15:0,45,716	0/0:41,2:43:46.27:0,46,1775	0/0:24,1:25:17.70:0,18,974	0/1:26,5:30:23.52:24,0,1179	0/1:14,7:21:99:299,0,622	0/0:3,0:3:9.03:0,9,147
chr10	86438965	.	C	CAT	4324.85	PASS	AB=0.814;AC=20;AF=0.357;AN=56;BaseQRankSum=16.535;DP=696;FS=4.394;HRun=0;HaplotypeScore=156.4491;InbreedingCoeff=-0.5953;MQ=104.25;MQ0=0;MQRankSum=-13.407;QD=7.78;ReadPosRankSum=1.272;VQSLOD=4.5346;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:37,12:49:99:271,0,1565	0/0:3,0:3:6.02:0,6,93	0/1:43,3:46:99:122,0,1125	0/1:44,9:54:99:392,0,974	0/0:11,1:12:33.11:0,33,538	0/1:13,6:19:99:159,0,575	0/1:19,4:23:99:119,0,741	0/1:37,8:45:99:311,0,1263	0/1:16,7:23:99:170,0,639	0/1:12,1:13:17.41:17,0,478	0/1:5,1:6:35.98:36,0,181	0/1:19,3:22:99:133,0,738	0/1:18,3:21:93.67:94,0,786	0/1:17,4:21:99:145,0,723	0/1:19,20:38:99:726,0,745	0/1:18,11:29:99:353,0,681	0/1:20,15:35:99:664,0,737	0/1:16,5:20:57.87:58,0,672	0/1:24,4:29:99:193,0,831	0/0:4,0:4:12.04:0,12,192	0/0:34,2:36:7.39:0,7,1545	0/1:5,3:8:32.95:33,0,226	0/0:16,0:16:42.14:0,42,685	0/0:40,2:42:44.75:0,45,1798	0/0:23,1:24:1.86:0,2,950	0/1:26,5:30:25.36:25,0,1187	0/1:15,7:22:99:304,0,622	0/0:3,0:3:9.03:0,9,147
chr10	86439024	.	TAC	T	610.29	PASS	AB=0.943;AC=23;AF=0.411;AN=56;BaseQRankSum=4.895;DP=570;FS=1.293;HRun=0;HaplotypeScore=117.9466;InbreedingCoeff=0.1069;MQ=70.45;MQ0=26;MQRankSum=-4.400;QD=2.09;ReadPosRankSum=0.790;VQSLOD=2.4939;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,1:31:17.59:141,18,0	1/1:6,3:9:6.28:122,6,0	0/0:64,0:36:17.93:0,18,188	0/0:54,0:31:30.37:0,30,297	0/1:8,1:9:21.17:21,0,107	0/1:24,1:22:28.02:28,0,498	0/0:28,0:28:23.38:0,23,657	0/1:20,0:25:58.53:64,0,59	0/0:21,0:18:29.64:0,30,346	0/1:12,2:13:3.20:106,0,3	1/1:3,2:5:3.01:36,3,0	0/1:13,0:13:15.69:16,0,308	0/0:6,0:6:17.78:0,18,216	0/1:11,0:11:25.65:26,0,134	0/0:16,0:16:29.55:0,30,375	0/0:22,0:22:11.42:0,11,399	0/1:18,2:19:0.16:161,0,0	0/0:21,0:20:32.94:0,33,350	0/1:14,0:15:0.49:0,0,19	0/1:8,0:6:1.13:11,0,1	1/1:26,0:23:2.37:8,2,0	0/0:12,0:10:18.02:0,18,238	0/1:17,0:17:5.90:6,0,394	0/0:34,0:34:69:0,69,955	0/1:19,0:18:6.69:7,0,354	0/1:15,0:16:3.76:4,0,86	0/1:15,0:13:10.51:11,0,34	1/1:7,0:6:1.54:4,2,0
chr10	86439041	.	ACAC	A	1552.29	PASS	AB=0.985;AC=22;AF=0.393;AN=56;BaseQRankSum=6.022;DP=689;FS=1.633;HRun=0;HaplotypeScore=115.3928;InbreedingCoeff=-0.0022;MQ=42.70;MQ0=114;MQRankSum=-6.585;QD=3.88;ReadPosRankSum=-0.744;VQSLOD=2.3080;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:26:18.81:0,19,75	0/1:14,0:11:33.21:59,0,33	0/0:54,0:11:20.71:0,21,224	0/1:50,0:22:27.86:28,0,418	0/0:20,1:17:29.25:0,29,417	0/0:28,1:26:24.24:0,24,762	0/1:29,1:28:73.66:74,0,804	0/1:32,0:30:99:396,0,146	0/0:23,0:20:4.60:0,5,407	0/1:22,0:14:94.13:127,0,94	0/0:11,0:6:1.26:0,1,4	0/1:15,0:12:0.80:1,0,346	0/0:14,0:8:20.64:0,21,229	0/1:17,1:12:11.08:11,0,344	0/1:25,0:21:99:126,0,638	0/1:27,1:22:39.83:40,0,483	0/1:30,2:29:25.56:90,0,26	0/1:21,0:17:99:127,0,121	0/1:20,0:13:54.45:175,0,54	1/1:8,4:8:4.41:15,4,0	1/1:30,0:18:4.56:43,5,0	0/0:17,0:11:24.08:0,24,461	0/0:23,0:18:4.55:0,5,542	0/0:44,0:39:33.50:0,33,1142	0/0:18,0:14:31.24:0,31,524	1/1:24,0:18:21.77:260,22,0	1/1:19,0:14:22.63:145,23,0	1/1:8,0:5:0.94:3,1,0
chr10	86439043	.	AC	A	2004.05	PASS	AB=0.827;AC=25;AF=0.446;AN=56;BaseQRankSum=3.745;DP=701;FS=1.020;HRun=2;HaplotypeScore=100.6633;InbreedingCoeff=0.0090;MQ=42.32;MQ0=117;MQRankSum=-5.402;QD=4.52;ReadPosRankSum=-2.136;VQSLOD=-0.2377;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,8:27:15.56:0,16,45	0/1:10,6:12:11.49:82,0,11	0/0:49,3:10:20.70:0,21,228	0/1:49,3:24:31.30:31,0,426	0/0:20,2:18:28.09:0,28,324	0/0:23,6:26:39.66:0,40,653	0/1:24,5:27:53.92:54,0,658	0/1:29,3:30:99:539,0,118	0/1:19,4:20:28.14:28,0,335	0/1:18,5:15:83.64:148,0,84	1/1:8,4:7:0.36:20,0,0	0/1:11,4:12:4.94:5,0,277	0/0:9,5:8:23.28:0,23,264	0/1:10,8:12:1.14:1,0,251	0/1:17,9:22:99:124,0,477	0/0:14,12:20:6.06:0,6,391	0/1:29,4:30:2.08:66,0,2	0/1:17,5:18:84.98:85,0,157	0/1:17,4:13:45:259,0,45	1/1:7,5:8:4.41:15,4,0	1/1:21,9:18:4.56:43,5,0	0/0:16,2:12:24.08:0,24,345	0/1:23,4:22:33.36:33,0,471	0/0:30,12:37:36.20:0,36,906	0/0:13,6:15:30.68:0,31,398	1/1:19,5:18:38.71:415,39,0	1/1:14,5:14:24.41:221,24,0	1/1:5,3:5:0.94:3,1,0
chr10	86439044	.	C	CA	2293.99	PASS	AB=0.864;AC=25;AF=0.446;AN=56;BaseQRankSum=3.309;DP=698;FS=0.000;HRun=1;HaplotypeScore=101.7517;InbreedingCoeff=0.0700;MQ=42.68;MQ0=117;MQRankSum=-5.940;QD=5.14;ReadPosRankSum=-2.410;VQSLOD=-0.5518;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,5:24:3.10:3,0,30	0/1:14,2:12:5.17:103,0,5	0/0:51,0:11:20.19:0,20,228	0/1:50,0:23:31.31:31,0,427	0/0:14,6:16:25.60:0,26,307	0/0:29,0:26:28.98:0,29,640	0/1:26,1:27:45.74:46,0,674	0/1:18,12:28:99:583,0,116	0/1:16,5:20:94.94:95,0,355	0/1:17,6:15:79.17:161,0,79	1/1:9,3:7:0.19:19,0,0	0/0:13,0:10:18.55:0,19,299	0/0:13,0:8:24.03:0,24,278	0/0:18,0:13:0.45:0,0,249	0/1:27,1:25:99:182,0,434	0/0:25,1:20:28.86:0,29,405	1/1:13,22:32:2.72:59,3,0	0/1:16,2:18:78.78:79,0,246	0/1:13,9:14:42.89:285,0,43	1/1:10,1:8:4.41:15,4,0	1/1:19,11:18:4.56:42,5,0	0/0:15,4:13:24.08:0,24,326	0/1:25,3:23:33.23:33,0,443	0/0:37,3:36:34.06:0,34,862	0/0:20,0:15:30.67:0,31,365	1/1:8,16:18:40.91:463,41,0	1/1:9,10:15:24.23:260,24,0	1/1:3,4:4:1.24:3,1,0
chr10	86439285	.	CGGA	C	6791.69	PASS	AB=0.742;AC=26;AF=0.464;AN=56;BaseQRankSum=17.099;DP=631;FS=2.063;HRun=0;HaplotypeScore=118.9721;InbreedingCoeff=-0.8735;MQ=76.70;MQ0=0;MQRankSum=-11.218;QD=10.92;ReadPosRankSum=1.881;VQSLOD=4.5690;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,15:54:99:498,0,2679	0/1:4,1:5:39.89:40,0,221	0/1:19,4:24:99:303,0,733	0/1:17,7:24:99:362,0,828	0/0:5,0:5:15.05:0,15,369	0/1:13,6:19:99:101,0,908	0/1:20,11:31:99:198,0,1344	0/1:38,8:46:98.85:99,0,2367	0/1:11,8:19:93.39:93,0,713	0/1:5,12:17:99:345,0,303	0/0:3,1:4:9.03:0,9,222	0/1:11,6:17:99:125,0,660	0/1:16,6:22:99:163,0,1055	0/1:15,6:21:99:113,0,979	0/1:8,21:29:99:612,0,494	0/1:18,6:24:99:160,0,1077	0/1:21,35:56:99:1257,0,1410	0/1:17,16:33:99:533,0,1100	0/1:13,3:16:16.70:17,0,796	0/1:4,4:8:99:151,0,134	0/1:28,12:40:99:285,0,1905	0/1:5,3:8:61.63:62,0,243	0/1:5,2:7:90.25:90,0,342	0/1:29,14:43:99:372,0,1901	0/1:11,8:19:99:388,0,716	0/1:10,10:20:99:304,0,607	0/1:3,5:8:99:102,0,154	0/1:11,1:12:19.81:20,0,653
chr10	86439892	.	TG	T	2281.07	PASS	AB=0.962;AC=15;AF=0.268;AN=56;BaseQRankSum=11.124;DP=550;FS=15.351;HRun=9;HaplotypeScore=62.1680;InbreedingCoeff=0.8968;MQ=84.91;MQ0=0;MQRankSum=-1.870;QD=14.62;ReadPosRankSum=-0.948;VQSLOD=1.8919;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,1:30:36.03:0,36,624	0/0:9,0:9:27.06:0,27,300	0/1:24,1:24:1.81:2,0,381	0/0:19,0:19:38.91:0,39,391	0/0:11,1:12:2.61:0,3,274	0/0:14,0:14:30.09:0,30,346	0/0:23,0:23:57.15:0,57,645	1/1:8,14:22:38.85:349,39,0	0/0:20,1:21:32.69:0,33,611	0/0:23,0:23:42.12:0,42,478	0/0:4,0:4:9.03:0,9,103	0/0:21,1:22:32.67:0,33,615	0/0:20,0:20:48.14:0,48,553	0/0:32,0:32:78.22:0,78,892	0/0:29,0:29:66.17:0,66,742	0/0:19,0:19:42.06:0,42,461	0/0:24,0:23:41.69:0,42,683	0/0:29,0:29:43.29:0,43,683	1/1:0,13:13:35.99:320,36,0	1/1:1,9:10:20.87:173,21,0	1/1:9,32:41:83.91:754,84,0	0/0:13,0:13:30.09:0,30,345	0/0:9,0:9:18.03:0,18,196	0/0:34,0:34:90.25:0,90,1029	0/0:8,0:8:21.06:0,21,242	1/1:4,17:21:48.02:439,48,0	1/1:5,14:19:33.01:302,33,0	1/1:0,5:5:15.01:137,15,0
chr10	86442113	.	GGGAAAGA	G	917.73	PASS	AB=0.839;AC=2;AF=0.036;AN=56;BaseQRankSum=8.270;DP=750;FS=0.720;HRun=0;HaplotypeScore=188.4580;InbreedingCoeff=-0.0371;MQ=100.93;MQ0=0;MQRankSum=6.711;QD=10.93;ReadPosRankSum=-3.695;VQSLOD=1.9367;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:50:99:0,154,6030	0/0:9,0:9:27.09:0,27,1133	0/1:27,13:43:99:630,0,1919	0/1:34,4:41:99:377,0,2386	0/0:17,0:17:51.18:0,51,2083	0/0:19,0:19:57.20:0,57,2388	0/0:38,0:38:99:0,114,4499	0/0:29,0:29:81.27:0,81,3108	0/0:23,0:23:69.24:0,69,2897	0/0:23,0:23:63.22:0,63,2643	0/0:9,0:9:27.09:0,27,1011	0/0:38,0:38:99:0,114,4610	0/0:33,0:33:99:0,99,4060	0/0:21,0:21:63.22:0,63,2532	0/0:23,0:23:69.24:0,69,2895	0/0:34,0:34:99:0,102,4237	0/0:24,0:24:72.25:0,72,2862	0/0:37,0:37:99:0,111,4525	0/0:23,0:23:66.23:0,66,2635	0/0:22,0:22:63.22:0,63,2320	0/0:48,0:48:88.81:0,89,5505	0/0:14,0:14:42.14:0,42,1635	0/0:11,0:11:33.11:0,33,1385	0/0:34,0:34:99:0,102,4085	0/0:22,0:22:66.23:0,66,2743	0/0:30,0:30:87.30:0,87,3430	0/0:24,0:24:72.24:0,72,2830	0/0:10,0:10:30.09:0,30,1158
chr10	86442776	.	TAC	T	74.65	PASS	AB=0.952;AC=10;AF=0.200;AN=50;BaseQRankSum=1.051;DP=601;FS=0.000;HRun=0;HaplotypeScore=77.3204;InbreedingCoeff=-0.1050;MQ=58.05;MQ0=27;MQRankSum=1.489;QD=0.44;ReadPosRankSum=1.649;VQSLOD=0.5908;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:14.98:0,15,123	./.	./.	./.	0/1:10,1:11:10.75:11,0,36	0/1:15,0:15:11.27:11,0,62	0/0:28,0:28:17.81:0,18,205	0/0:26,0:24:2.98:0,3,21	0/1:16,0:15:28.88:29,0,38	0/0:13,0:13:8.92:0,9,88	0/0:8,0:8:9:0,9,109	0/0:22,0:20:3.38:0,3,162	0/1:17,0:16:42.92:43,0,215	0/0:16,0:16:3.90:0,4,58	0/1:15,3:17:42.89:43,0,146	0/1:21,2:23:4.90:5,0,257	0/0:18,0:17:22.73:0,23,241	1/1:15,0:16:8.07:40,8,0	0/0:25,0:23:6.85:0,7,49	0/0:15,0:15:8.99:0,9,75	0/0:47,0:46:32.82:0,33,267	0/1:16,1:17:16.72:17,0,86	0/0:12,0:12:5.69:0,6,55	0/1:34,0:34:5.53:6,0,230	0/0:19,0:18:2.37:0,2,203	0/0:16,0:15:19.57:0,20,145	0/0:9,0:9:15.01:0,15,161	0/0:5,0:5:5.96:0,6,44
chr10	86443941	.	TGAG	T	5549.97	PASS	AB=0.551;AC=13;AF=0.232;AN=56;BaseQRankSum=12.846;DP=571;FS=12.500;HRun=0;HaplotypeScore=87.5934;InbreedingCoeff=0.8862;MQ=85.34;MQ0=0;MQRankSum=-4.346;QD=37.50;ReadPosRankSum=0.799;VQSLOD=5.0618;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,2244	0/0:7,0:7:18.06:0,18,407	0/0:20,0:20:60.20:0,60,1215	0/0:20,0:20:54.18:0,54,1123	0/0:13,0:13:36.11:0,36,774	0/0:19,0:19:57.20:0,57,1290	0/0:22,0:22:66.23:0,66,1495	1/1:0,21:21:60.16:911,60,0	0/0:16,0:16:48.16:0,48,1064	0/0:20,0:20:54.18:0,54,1181	0/0:18,0:18:51.17:0,51,1123	0/0:27,0:27:72.25:0,72,1582	0/0:17,0:17:48.16:0,48,1082	0/0:17,0:17:48.16:0,48,1085	0/0:24,0:24:69.24:0,69,1476	0/0:20,0:20:57.20:0,57,1281	0/0:37,0:37:96.33:0,96,2172	0/0:34,0:34:99:0,102,2284	1/1:3,17:20:51.14:773,51,0	1/1:0,12:12:18.06:300,18,0	1/1:0,34:34:78.55:1299,79,0	0/0:12,0:12:33.11:0,33,747	0/0:4,0:4:9.03:0,9,204	0/0:23,0:21:60.21:0,60,1360	0/0:18,0:18:45.15:0,45,996	0/1:5,22:27:99:969,0,132	1/1:3,18:21:42.14:698,42,0	1/1:0,13:13:36.12:599,36,0
chr10	86445227	.	TAC	T	885.05	PASS	AB=0.907;AC=21;AF=0.404;AN=52;BaseQRankSum=6.094;DP=549;FS=4.614;HRun=0;HaplotypeScore=78.2537;InbreedingCoeff=-0.3499;MQ=72.10;MQ0=7;MQRankSum=0.242;QD=2.49;ReadPosRankSum=1.945;VQSLOD=1.4098;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,10:28:26.90:278,27,0	0/0:4,0:4:9.03:0,9,135	./.	./.	0/1:13,0:14:25.73:26,0,162	0/1:16,1:18:44.18:44,0,199	0/0:24,1:25:5.87:0,6,500	0/1:21,0:20:4.17:4,0,136	0/0:16,0:16:1.24:0,1,142	0/1:15,1:16:13.91:14,0,198	0/0:10,0:10:15.04:0,15,204	0/1:21,1:24:25.18:25,0,343	1/1:8,5:13:7.26:64,7,0	0/1:12,0:14:4.19:4,0,102	0/0:17,0:19:21.28:0,21,340	0/1:15,1:16:17.92:18,0,124	0/1:24,5:29:80.67:81,0,499	0/1:23,3:26:95.94:96,0,262	0/1:19,1:21:70.94:71,0,97	0/1:8,0:9:2.16:2,0,95	0/0:40,2:43:18.15:0,18,616	0/0:14,0:13:21.05:0,21,290	0/1:5,0:6:5.12:5,0,75	0/1:37,1:38:70.36:70,0,598	0/1:18,2:20:38.77:39,0,288	0/1:15,2:17:80.30:80,0,111	0/1:15,2:17:70.52:71,0,207	0/1:5,3:8:46.03:46,0,141
chr10	86446796	.	TA	T	1776.82	PASS	AB=0.888;AC=12;AF=0.214;AN=56;BaseQRankSum=6.630;DP=684;FS=1.734;HRun=12;HaplotypeScore=81.1121;InbreedingCoeff=0.8399;MQ=69.53;MQ0=1;MQRankSum=-0.425;QD=11.46;ReadPosRankSum=2.298;VQSLOD=3.6669;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,26:37:43.75:583,44,0	1/1:1,6:7:14.94:116,15,0	0/0:23,0:22:9.40:0,9,252	0/0:13,0:11:21.38:0,21,189	0/0:25,1:29:48.51:0,49,621	0/0:15,1:16:15.84:0,16,342	0/0:20,1:23:27.55:0,28,428	0/0:24,0:24:39.06:0,39,385	0/0:28,1:28:43.35:0,43,596	1/1:5,21:27:64.79:493,65,0	1/1:5,19:24:20.20:334,20,0	0/0:31,1:34:50.06:0,50,814	0/0:24,0:24:55.34:0,55,541	0/0:26,1:28:54.55:0,55,681	0/0:30,1:31:47.13:0,47,638	0/0:31,0:33:83.83:0,84,814	1/1:6,19:27:36.35:419,36,0	0/0:32,1:33:69.63:0,70,847	0/0:18,2:24:16.12:0,16,469	0/0:25,1:30:51.50:0,52,648	0/0:20,0:23:45.62:0,46,415	0/0:12,0:12:30.05:0,30,298	0/0:21,1:22:22.31:0,22,396	0/0:19,1:20:27.85:0,28,458	0/1:17,2:20:4.21:4,0,271	0/0:34,2:37:51.70:0,52,666	0/0:19,1:20:24.90:0,25,424	0/1:10,1:13:0.20:0,0,199
chr10	86449441	.	C	CGGCCCCG	2121.15	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-1.021;DP=331;FS=2.677;HRun=0;HaplotypeScore=78.7958;InbreedingCoeff=0.7816;MQ=62.16;MQ0=0;MQRankSum=-4.337;QD=25.56;ReadPosRankSum=-5.740;VQSLOD=1.7374;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.29:0,84,1969	0/0:6,0:6:12.04:0,12,252	0/0:3,0:3:6.02:0,6,143	0/1:4,0:4:0.48:0,0,66	0/0:8,0:8:21.07:0,21,499	0/0:6,0:6:12.04:0,12,285	0/0:25,0:25:42.14:0,42,944	1/1:12,0:12:10.28:208,10,0	0/0:7,0:7:15.05:0,15,357	0/0:9,0:9:12.04:0,12,277	0/0:7,0:7:12.04:0,12,284	0/0:9,0:9:18.06:0,18,428	0/0:9,0:9:24.08:0,24,565	0/0:9,0:9:24.08:0,24,543	0/0:7,0:7:18.06:0,18,419	0/0:11,0:11:24.08:0,24,567	0/0:27,0:27:66.23:0,66,1563	0/0:27,0:27:72.25:0,72,1667	1/1:8,1:9:24.07:527,24,0	1/1:0,1:2:3.01:51,3,0	1/1:23,8:34:7.99:260,8,0	0/0:4,0:4:9.03:0,9,208	0/0:3,0:3:6.02:0,6,143	0/0:33,0:33:93.32:0,93,2206	0/0:8,0:8:12.04:0,12,282	1/1:5,4:11:21.05:583,21,0	1/1:4,6:10:15.05:555,15,0	1/1:0,1:1:3.01:113,3,0
chr10	86451972	.	G	GACAAAACAAAACAAA	7568.80	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=5.490;DP=655;FS=22.362;HRun=0;HaplotypeScore=252.5492;InbreedingCoeff=0.8825;MQ=69.16;MQ0=2;MQRankSum=-8.796;QD=27.93;ReadPosRankSum=-5.309;VQSLOD=2.0158;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:33.01:1286,33,0	1/1:6,3:10:9.03:639,9,0	0/0:30,0:23:5.92:0,6,40	0/0:45,0:24:5.56:0,6,101	0/0:25,0:25:42.10:0,42,1399	0/0:16,0:16:24.03:0,24,640	0/0:28,0:28:9.68:0,10,1090	1/1:26,0:26:24.03:484,24,0	0/0:19,0:19:24.08:0,24,824	1/1:30,0:29:30:1152,30,0	1/1:14,3:22:9.03:466,9,0	0/0:23,0:24:39.05:0,39,1226	0/0:21,0:21:21.07:0,21,813	0/0:21,0:21:24.08:0,24,987	0/0:28,0:28:33.10:0,33,1132	0/0:17,0:17:30.09:0,30,1008	1/1:30,4:40:28.60:1318,29,0	0/0:25,0:25:7.78:0,8,1544	1/1:16,0:16:6:119,6,0	1/1:18,0:28:24.05:536,24,0	1/1:13,0:17:3.01:34,3,0	0/0:16,0:16:24.06:0,24,847	0/0:18,0:18:33.10:0,33,1196	0/0:26,0:27:60.19:0,60,2131	0/0:24,0:23:18.06:0,18,720	1/1:13,0:27:42.07:928,42,0	1/1:8,0:19:15.52:414,16,0	1/1:6,0:6:9.02:194,9,0
chr10	86453607	.	C	CT	1401.45	PASS	AB=0.911;AC=21;AF=0.375;AN=56;BaseQRankSum=-3.179;DP=643;FS=5.547;HRun=14;HaplotypeScore=90.3489;InbreedingCoeff=0.4024;MQ=64.34;MQ0=5;MQRankSum=-0.827;QD=4.43;ReadPosRankSum=-4.279;VQSLOD=0.8247;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:29,1:33:23.50:23,0,189	0/1:7,0:9:8.30:8,0,64	1/1:24,0:15:0.98:35,1,0	0/1:17,0:11:7.53:13,0,8	0/0:11,0:13:21.60:0,22,126	0/0:17,0:17:26.32:0,26,168	0/0:20,4:24:5.90:0,6,165	1/1:24,12:36:16.94:260,17,0	0/0:11,0:13:10.66:0,11,62	0/0:22,1:25:3.87:0,4,138	0/0:22,0:21:28.49:0,28,189	0/0:26,0:27:8.24:0,8,173	0/1:14,0:15:3.09:3,0,82	0/0:14,1:17:25.40:0,25,155	0/0:29,2:32:21.02:0,21,252	0/0:33,5:39:8.30:0,8,297	0/0:35,0:36:33.49:0,33,326	0/1:15,2:18:31:31,0,66	1/1:15,18:32:22.23:315,22,0	1/1:7,13:20:30.77:246,31,0	1/1:7,5:13:8.09:91,8,0	0/0:24,1:25:11.17:0,11,190	0/0:13,0:13:1.23:0,1,100	0/0:21,0:24:29.34:0,29,171	0/1:26,1:27:2.74:3,0,173	1/1:13,22:35:13.76:321,14,0	1/1:8,18:26:17.81:166,18,0	0/1:1,5:6:7.27:67,0,7
chr10	86455406	.	AAG	A	1946.05	PASS	AB=1.000;AC=19;AF=0.352;AN=54;BaseQRankSum=3.336;DP=518;FS=24.889;HRun=0;HaplotypeScore=72.5538;InbreedingCoeff=0.6864;MQ=57.34;MQ0=13;MQRankSum=-4.692;QD=8.54;ReadPosRankSum=-7.572;VQSLOD=0.2817;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:27:28.66:34,0,29	1/1:10,0:10:1.33:82,1,0	0/0:15,0:10:28.55:0,29,229	0/0:8,0:6:10.97:0,11,90	0/0:26,0:26:61.68:0,62,743	0/0:22,0:22:27.84:0,28,610	0/0:19,0:18:34.46:0,34,651	1/1:31,2:33:69.19:562,69,0	0/0:15,0:14:24.12:0,24,406	0/1:32,0:31:12.17:220,0,12	1/1:18,0:18:14.93:133,15,0	0/0:16,0:15:22.05:0,22,412	0/0:13,0:13:35.56:0,36,400	0/0:10,0:10:23.73:0,24,288	0/0:30,0:30:60.31:0,60,871	0/0:24,0:22:62.36:0,62,724	0/1:27,0:24:43.03:43,0,44	0/0:18,0:18:41.57:0,42,429	1/1:13,1:14:37.52:288,38,0	1/1:19,3:21:37.96:364,38,0	./.	0/0:14,0:14:29.23:0,29,302	0/0:11,0:11:29.97:0,30,361	0/0:18,0:16:38.69:0,39,489	0/0:23,0:23:40.05:0,40,724	1/1:16,2:18:13.84:272,14,0	1/1:16,0:16:8.95:80,9,0	1/1:2,4:6:7.23:63,7,0
chr10	86458428	.	G	GC	450.02	PASS	AB=0.500;AC=29;AF=0.853;AN=34;BaseQRankSum=1.481;DP=62;FS=0.000;HRun=0;HaplotypeScore=102.0191;InbreedingCoeff=0.2835;MQ=42.07;MQ0=0;MQRankSum=0.619;QD=8.49;ReadPosRankSum=-0.027;VQSLOD=3.5897;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,2:2:5.70:29,6,0	./.	0/0:1,0:1:0:0,0,0	1/1:0,1:1:1.25:3,1,0	1/1:0,5:5:10.65:46,11,0	./.	./.	1/1:0,3:3:8.15:35,8,0	1/1:0,2:2:5.54:25,6,0	./.	1/1:0,6:6:14:66,14,0	1/1:0,7:7:13.40:57,13,0	1/1:0,8:8:16.13:69,16,0	1/1:0,4:4:5.42:24,5,0	0/0:0,3:3:0.89:0,1,2	./.	1/1:0,1:1:2.96:19,3,0	./.	./.	./.	./.	0/1:0,2:2:3.74:4,0,8	./.	1/1:0,3:3:8.39:39,8,0	1/1:0,3:3:7.43:29,7,0	1/1:0,5:5:14.12:69,14,0	1/1:0,1:1:2.90:16,3,0
chr10	86458432	.	GT	G	193.62	PASS	AC=26;AF=0.813;AN=32;BaseQRankSum=1.718;DP=62;FS=2.730;HRun=1;HaplotypeScore=103.2247;InbreedingCoeff=0.3257;MQ=42.07;MQ0=0;MQRankSum=-0.254;QD=3.87;ReadPosRankSum=-0.366;VQSLOD=0.1834;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,2:2:4.82:17,5,0	./.	./.	0/0:0,1:1:0:0,0,0	1/1:0,5:5:7.81:24,8,0	./.	./.	1/1:0,3:3:5.85:18,6,0	1/1:0,2:2:4.44:14,4,0	./.	1/1:0,6:6:11.16:37,11,0	1/1:0,7:7:9.22:29,9,0	1/1:0,8:8:11.22:34,11,0	1/1:0,4:4:3.85:12,4,0	0/0:0,3:3:2.04:0,2,6	./.	1/1:0,1:1:2.80:13,3,0	./.	./.	./.	./.	0/0:0,2:2:0.71:0,1,10	./.	1/1:0,3:3:6.66:22,7,0	1/1:0,3:3:3.31:10,3,0	1/1:0,5:5:11.57:40,12,0	1/1:0,1:1:2.60:10,3,0
chr10	86461068	.	TGAA	T	3847.54	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.471;DP=641;FS=6.510;HRun=0;HaplotypeScore=97.7472;InbreedingCoeff=0.9996;MQ=100.81;MQ0=0;MQRankSum=-3.391;QD=46.36;ReadPosRankSum=2.552;VQSLOD=5.8794;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,2483	1/1:0,13:13:36.12:635,36,0	0/0:42,0:42:99:0,110,2472	0/0:33,0:33:69.59:0,70,1764	0/0:18,0:18:54.19:0,54,1274	0/0:17,0:17:48.08:0,48,1034	0/0:25,0:25:75.23:0,75,1675	0/0:13,0:13:36.12:0,36,809	0/0:16,0:16:48.11:0,48,1083	1/1:0,18:18:54.08:887,54,0	1/1:0,15:15:39.13:688,39,0	0/0:24,0:24:72.23:0,72,1655	0/0:25,0:25:75.22:0,75,1627	0/0:28,0:28:84.29:0,84,1911	0/0:26,0:26:78.27:0,78,1845	0/0:28,0:28:84.27:0,84,1869	1/1:1,36:37:93.32:1638,93,0	0/0:26,0:26:78.27:0,78,1845	0/0:19,0:19:57.19:0,57,1258	0/0:16,0:16:48.12:0,48,996	0/0:30,0:30:84.26:0,84,1894	0/0:15,0:15:45.15:0,45,1063	0/0:26,0:26:78.22:0,78,1695	0/0:23,0:23:69.23:0,69,1585	0/0:12,0:12:36.12:0,36,826	0/0:21,0:21:60.18:0,60,1285	0/0:30,0:30:90.17:0,90,2065	0/0:9,0:9:27.09:0,27,638
chr10	86462156	.	C	CA	661.82	PASS	AB=0.560;AC=7;AF=0.125;AN=56;BaseQRankSum=0.993;DP=393;FS=7.077;HRun=1;HaplotypeScore=69.7735;InbreedingCoeff=0.8110;MQ=84.34;MQ0=2;MQRankSum=2.119;QD=12.98;ReadPosRankSum=-0.571;VQSLOD=1.7936;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:22.48:0,22,195	1/1:0,3:4:8.79:63,9,0	0/0:21,0:16:20.29:0,20,157	0/0:26,0:24:39.12:0,39,402	0/0:8,0:8:14.98:0,15,106	0/0:9,0:9:23.97:0,24,215	0/0:22,0:22:56.90:0,57,538	0/0:19,0:19:47.95:0,48,416	0/0:15,0:15:26.59:0,27,235	0/1:3,11:14:1.40:221,0,1	1/1:17,0:17:27.28:218,27,0	0/0:20,0:20:39.47:0,39,352	0/0:9,0:9:21.35:0,21,161	0/0:20,0:20:38.37:0,38,331	0/0:15,0:15:23.92:0,24,209	0/0:11,0:11:31.59:0,32,310	1/1:16,0:16:40.15:302,40,0	0/0:8,0:8:11.89:0,12,87	0/0:15,0:15:16.27:0,16,233	0/0:8,0:8:20.86:0,21,159	0/0:31,0:30:65.61:0,66,546	0/0:4,0:4:6.01:0,6,64	0/0:8,0:8:15.01:0,15,146	0/0:21,0:21:50.81:0,51,434	0/0:14,0:14:20.07:0,20,255	0/0:14,0:13:11.64:0,12,207	0/0:8,0:8:20.78:0,21,153	0/0:3,0:3:8.99:0,9,74
chr10	86463614	.	C	CAAGTTCAGA	16405.81	PASS	AC=26;AF=0.500;AN=52;BaseQRankSum=-5.423;DP=505;FS=74.094;HRun=0;HaplotypeScore=103.1710;InbreedingCoeff=0.9806;MQ=41.76;MQ0=37;MQRankSum=-12.402;QD=84.13;ReadPosRankSum=-2.697;VQSLOD=2.0053;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,14:20:42.14:1956,42,0	1/1:0,2:3:8.99:311,9,0	./.	./.	0/0:15,0:14:30.10:0,30,919	0/0:19,0:16:30.10:0,30,919	0/0:20,0:17:27.09:0,27,821	1/1:10,9:18:45.15:1984,45,0	0/0:19,0:19:39.13:0,39,1183	1/1:6,7:15:39.13:1742,39,0	1/1:3,3:7:18.02:593,18,0	0/0:23,0:22:29.79:0,30,868	0/0:26,0:24:50.83:0,51,1341	0/0:25,0:23:48.16:0,48,1471	0/0:39,0:36:72.25:0,72,2142	0/0:17,0:17:36.12:0,36,1092	1/1:8,12:15:33.07:1433,33,0	1/1:7,11:13:33.07:1405,33,0	1/1:5,11:12:27.05:1053,27,0	1/1:5,10:15:39.13:1809,39,0	1/1:7,8:12:24:819,24,0	0/0:15,0:15:39.11:0,39,1054	0/0:23,0:21:48.04:0,48,1438	0/0:31,0:30:66.23:0,66,1960	0/0:18,0:17:39.06:0,39,1072	1/1:3,9:12:36.10:1548,36,0	1/1:4,8:12:33.07:1316,33,0	1/1:0,3:4:9.03:437,9,0
chr10	86465014	.	T	TTCTA	1735.04	PASS	AB=0.787;AC=21;AF=0.404;AN=52;BaseQRankSum=-5.967;DP=610;FS=3.100;HRun=0;HaplotypeScore=98.0568;InbreedingCoeff=0.5811;MQ=66.50;MQ0=6;MQRankSum=0.889;QD=6.09;ReadPosRankSum=-1.136;VQSLOD=2.0900;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:30:2.97:0,3,20	0/0:10,0:10:11.94:0,12,96	./.	./.	0/0:23,0:23:44.99:0,45,473	0/0:24,0:24:26.97:0,27,247	1/1:16,0:15:5.99:50,6,0	1/1:35,0:34:3.74:9,4,0	1/1:9,13:22:3.01:70,3,0	0/0:15,0:25:20.96:0,21,178	0/0:11,0:16:14.57:0,15,114	0/0:21,0:21:21.01:0,21,203	0/0:19,0:19:18.01:0,18,161	0/0:21,0:21:27.03:0,27,294	0/1:22,0:22:17.96:272,0,18	0/1:12,13:26:33.66:197,0,34	0/0:25,0:25:23.99:0,24,210	1/1:15,9:27:6.02:139,6,0	1/1:15,0:14:3.01:51,3,0	1/1:15,5:20:8.96:155,9,0	1/1:25,0:26:26.97:265,27,0	0/0:14,0:14:26.98:0,27,249	0/0:19,0:19:29.98:0,30,320	0/0:20,0:20:24.01:0,24,266	0/0:29,0:29:60.07:0,60,664	1/1:14,13:27:15.06:503,15,0	1/1:15,11:25:6.02:140,6,0	0/1:13,9:22:16.96:64,0,17
chr10	86466021	.	GAC	G	673.95	PASS	AB=0.982;AC=32;AF=0.571;AN=56;BaseQRankSum=-0.500;DP=309;FS=0.000;HRun=0;HaplotypeScore=133.4869;InbreedingCoeff=0.1584;MQ=32.72;MQ0=13;MQRankSum=2.572;QD=2.83;ReadPosRankSum=-3.556;VQSLOD=1.6120;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:9:0.36:1,0,0	1/1:2,2:4:3.01:37,3,0	0/0:15,0:2:2.88:0,3,15	0/1:15,0:4:0.12:0,0,0	1/1:13,0:11:2.11:6,2,0	0/1:7,0:7:0.18:0,0,1	0/1:16,0:14:32.58:33,0,50	1/1:8,0:7:1.88:25,2,0	0/0:6,0:6:6.01:0,6,63	1/1:19,2:20:49.63:387,50,0	1/1:4,1:4:1.34:4,1,0	0/0:17,0:17:8.01:0,8,60	0/1:21,0:21:53.35:53,0,119	0/1:10,0:10:0.04:0,0,0	0/0:20,1:21:2.85:0,3,26	0/1:9,0:8:19.02:19,0,24	1/1:5,3:8:6.01:66,6,0	0/0:3,0:3:3.80:0,4,28	0/0:4,0:4:3:0,3,29	0/1:8,0:8:16.89:17,0,22	1/1:12,0:11:1.77:6,2,0	1/1:13,0:12:5.94:33,6,0	1/1:7,0:7:7.51:48,8,0	0/1:16,0:15:0.23:0,0,1	1/1:8,0:7:3.11:9,3,0	0/1:20,0:20:36.02:36,0,106	0/0:5,0:5:3.48:0,3,42	0/1:6,0:7:0.30:32,0,0
chr10	86466054	.	ATTCTGTAT	A	1052.06	PASS	AB=0.802;AC=31;AF=0.574;AN=54;BaseQRankSum=2.011;DP=196;FS=2.229;HRun=0;HaplotypeScore=106.0613;InbreedingCoeff=0.0015;MQ=45.55;MQ0=0;MQRankSum=-0.454;QD=7.11;ReadPosRankSum=-1.363;VQSLOD=1.7243;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,1:8:4.26:39,4,0	0/0:5,0:5:5.61:0,6,52	./.	0/1:5,0:3:2.53:3,0,53	1/1:6,4:10:8.92:71,9,0	1/1:3,2:5:6.49:67,6,0	0/0:8,0:8:0.47:0,0,1	0/1:4,1:5:72.56:73,0,223	0/0:4,0:5:6.02:0,6,229	0/1:9,1:10:49.58:50,0,801	1/1:2,1:3:3.48:30,3,0	0/1:9,3:12:56.58:57,0,106	0/1:11,2:13:25.37:25,0,222	0/0:7,0:6:0.41:0,0,1	0/0:14,0:14:0.94:0,1,1	1/1:6,1:7:5.74:53,6,0	0/0:4,0:4:6.02:0,6,189	0/0:1,0:1:3.01:0,3,112	0/1:1,1:2:15.97:80,0,16	1/1:5,2:7:6.01:55,6,0	1/1:4,1:5:3:28,3,0	1/1:7,2:9:6.01:58,6,0	1/1:5,2:7:5.93:46,6,0	1/1:9,1:10:3:32,3,0	1/1:3,2:5:6:53,6,0	0/1:11,5:16:99:291,0,949	0/1:3,2:5:75.64:76,0,209	0/1:2,1:4:13.47:13,0,219
chr10	86468134	.	CA	C	671.77	PASS	AB=0.857;AC=11;AF=0.196;AN=56;BaseQRankSum=3.683;DP=459;FS=9.868;HRun=13;HaplotypeScore=53.3812;InbreedingCoeff=0.3979;MQ=58.89;MQ0=12;MQRankSum=2.031;QD=5.51;ReadPosRankSum=4.101;VQSLOD=0.9947;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:33:53.10:0,53,294	1/1:0,10:11:22.89:159,23,0	0/1:8,0:4:2.91:3,0,54	0/0:8,0:5:2.98:0,3,22	0/0:20,0:20:44.96:0,45,413	0/1:16,2:18:1.75:2,0,308	0/0:20,1:20:41.89:0,42,388	0/0:22,1:23:26.14:0,26,404	0/0:11,1:11:2.04:0,2,164	1/1:1,7:8:20.88:153,21,0	0/1:4,10:14:22.73:125,0,23	0/0:12,0:11:21.03:0,21,200	0/1:6,2:8:25.88:26,0,79	0/0:8,0:8:14.98:0,15,136	0/1:17,0:18:1.13:1,0,120	0/0:15,1:17:16.92:0,17,293	1/1:14,21:36:12.96:351,13,0	0/0:30,0:29:49.03:0,49,595	0/0:14,2:18:7.17:0,7,359	0/0:14,0:14:36.04:0,36,340	0/0:10,0:10:6.02:0,6,129	0/0:11,0:11:18.03:0,18,175	0/0:7,0:7:9.01:0,9,88	0/0:19,0:18:23.82:0,24,306	0/0:24,1:26:40.81:0,41,521	0/0:16,2:17:5.13:0,5,212	0/0:14,0:14:29.99:0,30,276	0/0:12,0:9:12.02:0,12,117
chr10	86471680	.	T	TCCTAG	6400.48	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-10.118;DP=847;FS=2.718;HRun=0;HaplotypeScore=157.6858;InbreedingCoeff=0.9852;MQ=77.29;MQ0=0;MQRankSum=-6.096;QD=71.12;ReadPosRankSum=-0.133;VQSLOD=6.1966;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,144,2890	1/1:0,10:10:30.10:937,30,0	0/0:14,0:14:9.90:0,10,591	0/0:29,0:29:50.18:0,50,1327	0/0:37,0:37:96.31:0,96,1935	0/0:20,0:20:54.18:0,54,1106	0/0:32,0:32:90.31:0,90,1871	0/0:32,0:32:93.32:0,93,1929	0/0:26,0:26:75.26:0,75,1598	1/1:6,27:35:90.31:2672,90,0	1/1:0,13:16:30.10:913,30,0	0/0:45,0:45:99:0,132,2729	0/0:27,0:27:75.26:0,75,1553	0/0:37,0:37:99:0,99,2049	0/0:51,0:51:99:0,144,2928	0/0:27,0:27:78.27:0,78,1632	1/1:1,27:29:60.21:1879,60,0	0/0:27,0:27:72.22:0,72,1434	0/0:32,0:32:84.27:0,84,1697	0/0:24,0:24:60.21:0,60,1278	0/0:39,0:39:99:0,114,2428	0/0:31,0:31:84.25:0,84,1646	0/0:32,0:32:93.32:0,93,1938	0/0:39,0:39:99:0,102,2075	0/0:22,0:22:59.76:0,60,1166	0/0:38,0:38:99:0,111,2255	0/0:36,0:36:99:0,102,2131	0/0:7,0:7:21.07:0,21,448
chr10	86472432	.	G	GA	2168.90	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-6.335;DP=429;FS=0.000;HRun=2;HaplotypeScore=48.2094;InbreedingCoeff=0.9643;MQ=86.14;MQ0=0;MQRankSum=-3.158;QD=38.73;ReadPosRankSum=2.679;VQSLOD=3.9575;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:54.17:0,54,669	1/1:0,6:6:18.06:259,18,0	0/0:10,0:10:29.98:0,30,331	0/0:25,0:25:62.02:0,62,674	0/0:12,0:12:33.06:0,33,392	0/0:8,0:8:21.07:0,21,260	0/0:18,0:18:54.17:0,54,665	0/0:27,0:27:75.23:0,75,919	0/0:13,0:13:39.12:0,39,482	1/1:1,18:19:57.19:812,57,0	1/1:1,2:3:6.02:86,6,0	0/0:16,0:16:42.13:0,42,520	0/0:11,0:11:33.10:0,33,399	0/0:18,0:18:51.16:0,51,629	0/0:23,0:23:66.17:0,66,780	0/0:15,0:15:45.14:0,45,558	1/1:1,27:28:81.27:1164,81,0	0/0:21,0:20:58.02:0,58,679	0/0:10,0:10:27.07:0,27,323	0/0:14,0:14:39.11:0,39,470	0/0:8,0:8:24.08:0,24,297	0/0:11,0:11:27.04:0,27,317	0/0:11,0:11:27.07:0,27,321	0/0:21,0:21:62.93:0,63,754	0/0:8,0:8:24.07:0,24,287	0/0:11,0:11:33.10:0,33,398	0/0:25,0:25:75.24:0,75,929	0/0:13,0:13:33.10:0,33,409
chr10	86472890	.	AC	A	1961.38	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.969;DP=688;FS=1.133;HRun=1;HaplotypeScore=64.1271;InbreedingCoeff=0.9627;MQ=85.40;MQ0=0;MQRankSum=-3.816;QD=38.46;ReadPosRankSum=1.220;VQSLOD=4.2606;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,51:51:99:2056,147,0	0/0:4,0:4:12.03:0,12,169	0/0:23,1:24:56.06:0,56,992	0/0:24,0:25:55.66:0,56,984	0/0:21,0:21:60.18:0,60,934	0/0:28,0:28:84.29:0,84,1343	0/0:31,0:31:93.30:0,93,1459	0/0:31,0:31:93.31:0,93,1464	0/0:20,0:20:60.20:0,60,954	0/0:34,0:34:95.95:0,96,1466	0/0:16,0:16:48.15:0,48,744	0/0:26,0:26:78.27:0,78,1247	0/0:17,0:17:51.17:0,51,813	0/0:25,0:25:75.24:0,75,1176	0/0:30,0:30:90.31:0,90,1436	0/0:24,0:24:72.23:0,72,1126	0/0:21,0:21:63.17:0,63,953	0/0:33,0:33:99:0,99,1529	0/0:25,0:25:75.25:0,75,1176	0/0:28,0:28:84.27:0,84,1319	0/0:39,0:39:99:0,117,1870	0/0:14,0:14:42.14:0,42,672	0/0:21,0:21:60.20:0,60,959	0/0:30,0:30:90.31:0,90,1435	0/0:18,0:17:54.18:0,54,863	0/0:27,0:27:81.28:0,81,1292	0/0:19,0:19:57.19:0,57,911	0/0:6,0:6:18.06:0,18,288
chr10	86474099	.	CCAA	C	4681.27	PASS	AB=0.944;AC=15;AF=0.268;AN=56;BaseQRankSum=5.959;DP=677;FS=0.792;HRun=0;HaplotypeScore=106.2871;InbreedingCoeff=0.9311;MQ=73.36;MQ0=0;MQRankSum=-0.103;QD=25.72;ReadPosRankSum=-0.456;VQSLOD=4.6184;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:78.45:0,78,1110	0/0:9,0:9:24.08:0,24,486	0/0:22,0:20:27.51:0,28,380	0/0:19,0:19:35.43:0,35,510	0/0:18,0:18:54.17:0,54,1061	0/0:25,0:25:69.11:0,69,1280	0/0:28,0:28:75.16:0,75,1364	1/1:14,27:41:79.46:1088,79,0	0/0:24,0:24:60.17:0,60,1132	0/0:22,0:22:63.17:0,63,1080	0/1:16,1:17:2.61:3,0,674	0/0:31,0:31:90.29:0,90,1793	0/0:25,0:25:66.21:0,66,1309	0/0:23,0:23:48.16:0,48,989	0/0:24,0:24:66.23:0,66,1337	0/0:26,0:26:69.20:0,69,1345	0/0:42,0:42:99:0,114,2098	0/0:31,0:31:72.21:0,72,1380	1/1:6,15:21:45.07:573,45,0	1/1:3,16:19:48.06:639,48,0	1/1:3,26:29:51.09:758,51,0	0/0:13,0:13:33.08:0,33,605	0/0:17,0:17:30.09:0,30,581	0/0:28,0:28:78.22:0,78,1543	0/0:23,0:23:63.18:0,63,1164	1/1:4,29:33:59.43:1218,59,0	1/1:7,9:16:15.05:224,15,0	1/1:1,5:6:12.04:179,12,0
chr10	86474450	.	AGAGGCAT	A	8458.05	PASS	AB=0.521;AC=13;AF=0.232;AN=56;BaseQRankSum=14.790;DP=745;FS=2.633;HRun=0;HaplotypeScore=178.9180;InbreedingCoeff=0.8782;MQ=88.51;MQ0=0;MQRankSum=-14.731;QD=52.86;ReadPosRankSum=-2.895;VQSLOD=4.2326;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,150,5678	0/0:12,0:12:36.12:0,36,1442	0/0:24,0:24:60.15:0,60,2152	0/0:34,0:34:90.49:0,90,3014	0/0:22,0:22:66.21:0,66,2494	0/0:20,0:20:60.21:0,60,2386	0/0:29,0:29:81.26:0,81,3117	1/1:1,19:20:57.13:1285,57,0	0/0:22,0:22:66.23:0,66,2546	0/0:23,0:23:63.22:0,63,2473	0/0:20,0:20:60.19:0,60,2216	0/0:35,0:35:99:0,105,4217	0/0:31,0:31:87.30:0,87,3452	0/0:23,0:23:69.21:0,69,2534	0/0:27,0:27:78.25:0,78,2963	0/0:26,0:26:75.25:0,75,2914	0/0:37,0:37:99:0,111,4117	0/0:43,0:43:99:0,129,4841	1/1:0,16:17:51.14:1165,51,0	1/1:0,26:26:42.14:1105,42,0	1/1:6,25:31:26.98:591,27,0	0/0:28,0:28:84.24:0,84,2960	0/0:13,0:13:39.13:0,39,1544	0/0:40,0:40:99:0,120,4768	0/0:21,0:21:63.18:0,63,2278	0/1:3,35:38:99:2503,0,112	1/1:0,26:26:63.22:1651,63,0	1/1:0,2:2:6.02:158,6,0
chr10	86475697	.	A	AT	1252.37	PASS	AB=0.940;AC=10;AF=0.179;AN=56;BaseQRankSum=2.123;DP=498;FS=1.847;HRun=10;HaplotypeScore=57.0881;InbreedingCoeff=0.7064;MQ=67.03;MQ0=3;MQRankSum=0.092;QD=13.18;ReadPosRankSum=0.376;VQSLOD=3.4369;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,102,831	1/1:2,8:10:21.05:224,21,0	0/0:13,0:8:14.51:0,15,90	0/1:18,0:11:6.43:6,0,85	0/0:29,0:29:77.86:0,78,636	0/0:25,0:25:62.84:0,63,506	0/0:16,0:17:40.95:0,41,326	0/0:24,0:24:41.88:0,42,340	0/0:15,0:15:35.92:0,36,293	1/1:2,8:10:24.04:242,24,0	1/1:2,10:13:29.91:302,30,0	0/0:14,0:13:35.96:0,36,296	0/0:13,0:13:35.93:0,36,292	0/0:18,0:18:38.95:0,39,320	0/0:13,1:14:0.96:0,1,214	0/0:24,0:24:62.90:0,63,515	1/1:2,19:21:56.98:590,57,0	0/0:18,0:20:52.01:0,52,406	0/0:26,0:26:59.89:0,60,493	0/0:7,0:7:20.97:0,21,172	0/1:19,3:22:53.07:53,0,270	0/0:16,0:16:44.94:0,45,369	0/0:13,1:14:35.95:0,36,296	0/0:15,0:15:32.94:0,33,271	0/0:11,0:11:20.97:0,21,172	0/0:16,1:17:6.95:0,7,263	0/0:19,0:19:50.93:0,51,416	0/0:12,0:12:20.96:0,21,172
chr10	86477654	.	GC	G	3054.35	PASS	AB=0.692;AC=21;AF=0.404;AN=52;BaseQRankSum=3.943;DP=658;FS=3.534;HRun=1;HaplotypeScore=48.1762;InbreedingCoeff=0.6684;MQ=39.28;MQ0=130;MQRankSum=-2.321;QD=16.16;ReadPosRankSum=-1.596;VQSLOD=3.1570;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,6:7:9.03:125,9,0	1/1:3,2:3:3.01:42,3,0	./.	./.	0/0:18,0:14:27.09:0,27,431	0/0:15,0:12:23.99:0,24,377	0/0:53,0:33:72.21:0,72,1101	0/1:8,5:8:99:163,0,120	0/0:33,0:30:63.21:0,63,1003	0/1:9,11:13:17.56:348,0,18	1/1:2,3:4:9.03:126,9,0	0/0:36,0:29:72.24:0,72,1139	0/0:28,0:24:54.18:0,54,852	0/0:32,0:28:72.25:0,72,1144	0/0:34,0:27:69.23:0,69,1088	0/0:27,0:26:75.26:0,75,1193	1/1:2,21:21:45.15:629,45,0	0/0:25,0:23:66.22:0,66,1048	0/1:13,9:10:17.82:347,0,18	1/1:5,5:5:9.03:126,9,0	1/1:13,32:34:60.20:839,60,0	0/0:30,0:18:21.07:0,21,336	0/0:11,0:7:12.02:0,12,168	0/0:65,0:58:99:0,134,2318	0/0:21,0:17:30.10:0,30,479	1/1:8,6:5:15.05:210,15,0	1/1:0,9:9:18.06:251,18,0	1/1:3,1:1:3.01:42,3,0
chr10	86479516	.	TAGGC	T	49.17	PASS	AC=4;AF=0.222;AN=18;BaseQRankSum=2.362;DP=433;FS=0.000;HRun=0;HaplotypeScore=77.4259;MQ=68.39;MQ0=11;MQRankSum=0.452;QD=1.09;ReadPosRankSum=0.553;VQSLOD=1.3334;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	./.	0/0:20,0:20:9.03:0,9,202	./.	./.	0/0:28,0:27:18.05:0,18,354	0/0:11,0:10:3.01:0,3,68	./.	0/0:14,0:14:3.01:0,3,68	0/0:22,0:22:12.04:0,12,273	./.	1/1:24,3:27:6.02:89,6,0	./.	./.	./.	./.	./.	0/0:35,0:34:6.02:0,6,137	0/0:8,0:8:3.01:0,3,68	./.	1/1:17,1:17:3.01:44,3,0	./.
chr10	86479747	.	A	ACG	718.97	PASS	AB=0.844;AC=6;AF=0.107;AN=56;BaseQRankSum=4.596;DP=639;FS=0.599;HRun=0;HaplotypeScore=101.9985;InbreedingCoeff=-0.1070;MQ=68.27;MQ0=4;MQRankSum=1.732;QD=7.65;ReadPosRankSum=0.499;VQSLOD=2.7594;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:49.32:0,49,462	0/1:3,1:4:10.81:79,0,11	0/0:26,0:20:51.62:0,52,706	0/0:26,0:19:36:0,36,438	0/0:9,0:9:27.09:0,27,411	0/0:27,0:27:78.23:0,78,1139	0/0:35,0:35:99:0,99,1464	0/1:19,0:19:21.08:21,0,160	0/0:21,0:21:54.15:0,54,780	0/1:14,5:19:99:178,0,193	0/1:4,1:5:35.33:35,0,41	0/0:43,0:43:99:0,114,1682	0/0:16,0:16:45.14:0,45,664	0/0:40,0:40:99:0,105,1539	0/0:28,0:28:78.26:0,78,1175	0/0:30,0:30:78.25:0,78,1170	0/1:11,14:25:69.20:520,0,69	0/0:29,0:29:84.16:0,84,1178	0/1:22,0:20:1.59:2,0,291	0/0:4,0:4:8.97:0,9,71	0/0:67,0:67:99:0,134,1203	0/0:14,0:14:39.13:0,39,595	0/0:8,0:8:24.08:0,24,358	0/0:47,0:47:99:0,141,2100	0/0:10,0:10:27.09:0,27,411	0/0:20,1:21:1.66:0,2,371	0/0:14,0:14:2.79:0,3,231	0/0:4,0:4:11.96:0,12,93
chr10	86479749	.	A	ACG	681.19	PASS	AB=0.838;AC=6;AF=0.107;AN=56;BaseQRankSum=4.761;DP=647;FS=8.274;HRun=0;HaplotypeScore=102.0367;InbreedingCoeff=-0.0779;MQ=68.81;MQ0=4;MQRankSum=0.849;QD=8.31;ReadPosRankSum=0.171;VQSLOD=2.6597;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:9.38:0,9,437	0/1:3,1:4:9.17:56,0,9	0/0:26,0:20:51:0,51,691	0/0:27,0:20:34.35:0,34,422	0/0:9,0:9:27.09:0,27,412	0/0:27,0:27:81.23:0,81,1160	0/0:35,0:35:96.31:0,96,1434	0/0:17,0:17:20.06:0,20,266	0/0:20,0:20:51.16:0,51,755	0/1:15,5:20:99:193,0,203	0/1:4,1:5:17.66:18,0,62	0/0:45,0:45:99:0,120,1730	0/0:15,0:15:45.14:0,45,664	0/0:39,0:39:99:0,105,1536	0/0:30,0:30:81.26:0,81,1210	0/0:29,0:29:81.24:0,81,1195	0/1:11,14:25:53.90:502,0,54	0/0:30,0:30:78.21:0,78,1135	0/0:21,0:19:14.32:0,14,301	0/0:4,0:4:8.97:0,9,71	0/0:71,0:71:52.18:0,52,1047	0/0:13,0:13:39.13:0,39,595	0/0:8,0:8:24.08:0,24,363	0/0:47,0:47:99:0,138,2076	0/0:10,0:10:27.09:0,27,412	0/1:21,1:22:1.33:1,0,351	0/0:14,0:14:38.78:0,39,302	0/1:6,0:6:28.02:28,0,75
chr10	86480284	.	AGAGAGAGAGAGAGAGAGAGAGAGAG	A	502.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.599;DP=627;FS=1.647;HRun=0;HaplotypeScore=312.8088;InbreedingCoeff=0.7197;MQ=64.61;MQ0=26;MQRankSum=-3.754;QD=29.58;ReadPosRankSum=-0.815;VQSLOD=2.0194;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,10:17:9.03:586,9,0	0/0:8,0:8:18.06:0,18,868	0/0:57,0:21:31.23:0,31,694	0/0:68,0:23:25.25:0,25,466	0/0:27,0:27:44.47:0,44,1983	0/0:25,0:24:12.70:0,13,1257	0/0:39,0:39:42.61:0,43,2259	0/0:37,0:35:71.39:0,71,1279	0/0:20,0:20:42.12:0,42,2368	0/0:17,0:16:27.09:0,27,1952	0/0:10,0:10:21.04:0,21,860	0/0:24,0:24:60.19:0,60,4501	0/0:19,0:19:42.14:0,42,2616	0/0:16,0:15:30.10:0,30,1515	0/0:36,0:36:72.24:0,72,4672	0/0:23,0:23:60.18:0,60,3972	0/0:14,0:13:33.11:0,33,2032	0/0:7,0:7:12.04:0,12,385	0/0:14,0:12:24.05:0,24,560	0/0:23,0:22:8.42:0,8,561	0/0:12,0:12:5.89:0,6,70	0/0:17,0:16:30.97:0,31,1376	0/0:11,0:11:27.09:0,27,1559	0/0:29,0:29:39.13:0,39,2655	0/0:9,0:9:13.71:0,14,466	0/0:16,0:16:27.09:0,27,1454	0/0:20,0:18:37.35:0,37,1509	0/0:12,0:9:17.07:0,17,428
chr10	86480308	.	AG	A	2292.99	PASS	AB=0.913;AC=18;AF=0.321;AN=56;BaseQRankSum=10.085;DP=614;FS=0.916;HRun=2;HaplotypeScore=83.6364;InbreedingCoeff=0.6259;MQ=49.26;MQ0=43;MQRankSum=-8.223;QD=11.46;ReadPosRankSum=-2.036;VQSLOD=1.2841;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,1:11:5.69:17,6,0	0/0:4,0:4:12.04:0,12,170	0/0:60,0:12:18.68:0,19,263	0/0:90,4:14:16.64:0,17,167	0/1:23,1:24:4.08:4,0,330	0/1:22,2:23:13.62:14,0,207	0/0:33,1:33:11.24:0,11,480	1/1:14,15:27:22.56:706,23,0	0/0:16,0:16:41.34:0,41,536	0/0:13,0:12:35.15:0,35,470	0/0:9,0:9:20.28:0,20,252	0/0:23,0:23:66.21:0,66,911	0/0:19,0:19:57.10:0,57,742	0/0:11,0:9:15.03:0,15,275	0/0:28,0:28:76.55:0,77,1019	0/0:22,0:22:66.01:0,66,890	0/0:18,0:17:48.16:0,48,658	0/1:5,0:5:22.33:22,0,86	0/1:14,6:15:92.04:214,0,92	1/1:13,9:21:27.50:256,27,0	1/1:7,6:11:3.01:39,3,0	0/0:17,0:16:46.55:0,47,582	0/0:11,0:11:23.29:0,23,293	0/0:23,2:25:44.32:0,44,577	0/0:9,1:10:13.07:0,13,232	1/1:10,6:15:40.88:429,41,0	1/1:13,7:18:47.94:494,48,0	1/1:9,7:12:26.96:288,27,0
chr10	86480309	.	G	GA	2773.25	PASS	AB=0.981;AC=18;AF=0.321;AN=56;BaseQRankSum=10.219;DP=628;FS=1.439;HRun=1;HaplotypeScore=95.2074;InbreedingCoeff=0.4830;MQ=48.85;MQ0=44;MQRankSum=-6.744;QD=11.18;ReadPosRankSum=-0.717;VQSLOD=1.5503;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:41.54:83,0,42	0/0:4,0:4:12.04:0,12,164	0/0:62,0:12:18.49:0,18,254	0/0:92,0:13:16.17:0,16,167	0/1:23,0:24:19:19,0,250	0/1:24,0:23:21.07:21,0,182	0/1:32,0:31:3.77:4,0,385	1/1:23,4:25:21.02:742,21,0	0/0:16,0:16:42.09:0,42,535	0/0:13,0:12:34.93:0,35,454	0/0:9,0:9:21.03:0,21,263	0/0:23,0:23:66.20:0,66,874	0/0:19,0:19:57.12:0,57,728	0/0:10,0:8:13.91:0,14,261	0/0:28,0:28:76.55:0,77,983	0/0:22,0:22:66.01:0,66,864	0/0:18,0:17:48.16:0,48,635	0/1:5,0:5:30.33:30,0,62	0/1:20,3:17:93.14:274,0,93	1/1:15,8:22:22.76:247,23,0	1/1:10,3:11:3.01:38,3,0	0/0:17,0:16:46.95:0,47,592	0/0:11,0:11:24.04:0,24,297	0/0:23,1:24:41.47:0,41,551	0/0:10,0:10:13.06:0,13,233	1/1:12,7:18:42.76:548,43,0	1/1:11,11:20:49.69:623,50,0	1/1:15,3:14:26.98:334,27,0
chr10	86480315	.	AG	A	1989.95	PASS	AB=0.776;AC=11;AF=0.196;AN=56;BaseQRankSum=10.228;DP=613;FS=3.456;HRun=1;HaplotypeScore=88.3519;InbreedingCoeff=0.4046;MQ=47.63;MQ0=39;MQRankSum=-9.027;QD=12.67;ReadPosRankSum=-0.771;VQSLOD=2.1292;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:13.87:14,0,27	0/0:4,0:4:12.04:0,12,182	0/0:55,0:10:17.54:0,18,229	0/0:98,0:14:19.92:0,20,254	0/0:23,0:23:43.18:0,43,653	0/0:23,0:22:19.12:0,19,356	0/0:31,0:30:52.53:0,53,786	0/1:10,16:24:9.78:576,0,10	0/0:12,0:12:33.11:0,33,497	0/0:13,0:12:36.12:0,36,536	0/0:9,0:9:21.07:0,21,307	0/0:23,0:23:66.22:0,66,1016	0/0:17,0:17:51.08:0,51,721	0/0:10,0:9:27.09:0,27,403	0/0:27,0:27:75.25:0,75,1142	0/0:22,0:22:60.19:0,60,906	0/0:17,0:16:42.12:0,42,628	0/0:6,0:7:20.98:0,21,269	0/1:18,4:16:99:154,0,165	0/1:11,10:20:28.17:227,0,28	1/1:12,1:11:5.93:40,6,0	0/0:17,0:17:50.37:0,50,705	0/0:12,0:12:30.10:0,30,432	0/0:25,0:25:45.11:0,45,657	0/0:11,0:11:26.84:0,27,371	1/1:7,13:19:56.82:593,57,0	1/1:14,7:20:12.45:366,12,0	0/1:8,5:10:24.55:179,0,25
chr10	86480316	.	G	GA	2794.95	PASS	AB=0.864;AC=11;AF=0.196;AN=56;BaseQRankSum=9.019;DP=607;FS=3.381;HRun=1;HaplotypeScore=86.7021;InbreedingCoeff=0.6372;MQ=48.66;MQ0=38;MQRankSum=-9.862;QD=20.25;ReadPosRankSum=-1.929;VQSLOD=3.3299;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:10.80:0,11,68	0/0:4,0:4:12.04:0,12,155	0/0:54,0:9:15.88:0,16,176	0/0:97,0:13:16.40:0,16,246	0/0:23,0:23:44.77:0,45,552	0/0:23,0:22:26.09:0,26,292	0/0:30,0:29:51.81:0,52,660	1/1:24,2:24:7.60:710,8,0	0/0:12,0:12:33.11:0,33,426	0/0:13,0:12:33.11:0,33,425	0/0:9,0:9:21.07:0,21,270	0/0:24,0:24:66.21:0,66,854	0/0:17,0:17:51.16:0,51,645	0/0:10,0:9:27.09:0,27,341	0/0:28,0:28:75.24:0,75,970	0/0:22,0:22:57.64:0,58,724	0/0:15,0:14:39.13:0,39,504	0/0:7,0:7:21:0,21,234	0/1:17,2:15:70.57:279,0,71	0/1:17,3:21:6.56:300,0,7	1/1:11,2:11:5.93:40,6,0	0/0:16,0:16:45.08:0,45,560	0/0:12,0:12:27.09:0,27,348	0/0:24,0:24:42.12:0,42,528	0/0:10,0:10:23.82:0,24,302	1/1:15,5:20:60.15:790,60,0	1/1:15,5:20:52.63:603,53,0	0/1:12,2:10:8.06:235,0,8
chr10	86480318	.	G	GA	343.67	PASS	AB=0.979;AC=8;AF=0.143;AN=56;BaseQRankSum=8.783;DP=593;FS=0.000;HRun=1;HaplotypeScore=95.0028;InbreedingCoeff=0.3448;MQ=49.12;MQ0=35;MQRankSum=-9.905;QD=2.86;ReadPosRankSum=1.512;VQSLOD=-0.3266;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:8.57:0,9,54	0/0:4,0:4:12.04:0,12,155	0/0:52,0:11:15.93:0,16,195	0/0:93,0:15:23.29:0,23,254	0/0:23,0:23:44.77:0,45,553	0/0:22,0:21:25.90:0,26,292	0/0:29,0:28:51.80:0,52,660	0/1:25,0:23:50.80:62,0,51	0/0:12,0:12:33.11:0,33,426	0/0:12,0:11:33.11:0,33,425	0/0:9,0:9:18.06:0,18,232	0/0:24,0:24:69.22:0,69,891	0/0:17,0:17:51.13:0,51,624	0/0:10,0:9:27.09:0,27,341	0/0:29,0:29:78.25:0,78,1007	0/0:21,0:21:54.18:0,54,699	0/0:15,0:14:39.13:0,39,504	0/0:8,0:8:21:0,21,249	1/1:14,1:12:7.32:87,7,0	0/1:20,2:21:14.39:14,0,141	0/0:12,1:11:8.49:0,8,68	0/0:15,0:15:45.08:0,45,560	0/0:11,0:11:27.09:0,27,348	0/0:23,0:23:42.14:0,42,543	0/0:10,0:10:23.80:0,24,284	0/1:23,0:22:33.84:34,0,70	1/1:19,1:20:12.09:235,12,0	0/1:12,0:10:43.23:51,0,43
chr10	86480362	.	GGA	G	65.59	PASS	AB=0.952;AC=9;AF=0.196;AN=46;BaseQRankSum=3.538;DP=462;FS=7.367;HRun=0;HaplotypeScore=87.2561;InbreedingCoeff=0.1940;MQ=52.60;MQ0=14;MQRankSum=-2.436;QD=0.52;ReadPosRankSum=2.009;VQSLOD=0.8330;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:12:11.99:0,12,101	./.	./.	./.	0/0:22,0:22:5.99:0,6,49	0/0:17,0:17:8.95:0,9,68	0/0:16,0:15:8.22:0,8,76	0/0:20,0:18:5.91:0,6,39	0/0:18,0:18:15.02:0,15,163	0/0:13,0:13:11.20:0,11,144	0/0:11,0:10:14.99:0,15,129	0/1:22,0:21:2.67:3,0,123	0/0:17,0:17:17.38:0,17,175	0/0:8,1:9:5.85:0,6,84	0/0:22,0:22:21.02:0,21,217	0/1:21,0:21:27.16:27,0,36	0/0:18,0:18:5.11:0,5,98	0/0:10,1:12:16.06:0,16,140	./.	0/0:17,0:15:0:0,0,0	./.	0/1:13,2:14:20.60:21,0,82	0/0:18,0:18:0.49:0,0,53	0/1:18,0:19:13.86:14,0,61	0/1:11,1:12:17.60:18,0,99	1/1:18,0:21:11.36:56,11,0	1/1:11,0:13:11.36:56,11,0	0/0:9,0:7:0.47:0,0,1
chr10	86481007	.	T	TA	2813.70	PASS	AB=0.905;AC=15;AF=0.268;AN=56;BaseQRankSum=-9.466;DP=560;FS=21.240;HRun=11;HaplotypeScore=64.0227;InbreedingCoeff=0.8740;MQ=66.60;MQ0=0;MQRankSum=0.825;QD=15.55;ReadPosRankSum=-2.186;VQSLOD=2.0152;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:37:51.97:0,52,151	0/0:6,0:6:17.93:0,18,139	0/0:13,0:7:5.96:0,6,46	0/0:23,0:15:10.30:0,10,146	0/0:31,0:32:73.58:0,74,560	0/0:24,0:24:62.75:0,63,488	0/0:23,1:24:32.29:0,32,431	1/1:13,25:37:26.27:576,26,0	0/0:11,0:11:23.59:0,24,173	0/0:22,0:22:44.81:0,45,348	0/1:17,2:19:4.44:4,0,297	0/0:15,0:15:25.15:0,25,225	0/0:16,0:16:38.83:0,39,301	0/0:16,0:16:38.85:0,39,301	0/0:20,0:20:41.77:0,42,320	0/0:19,0:19:44.75:0,45,342	0/0:24,0:24:45.23:0,45,462	0/0:17,0:17:38.76:0,39,294	1/1:6,16:22:4.69:390,5,0	1/1:3,18:21:27.82:449,28,0	1/1:9,11:20:36.94:356,37,0	0/0:11,0:11:14.92:0,15,116	0/0:17,0:17:38.81:0,39,299	0/0:10,0:10:23.91:0,24,186	0/0:21,0:21:47.75:0,48,368	1/1:6,25:31:69.12:690,69,0	1/1:5,16:20:39.05:388,39,0	1/1:4,5:9:15.03:152,15,0
chr10	86482545	.	C	CT	1245.37	PASS	AB=0.805;AC=15;AF=0.268;AN=56;BaseQRankSum=-5.419;DP=548;FS=1.575;HRun=15;HaplotypeScore=69.4580;InbreedingCoeff=0.1903;MQ=64.41;MQ0=8;MQRankSum=-1.338;QD=5.46;ReadPosRankSum=-2.577;VQSLOD=1.8733;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:27:28.78:0,29,269	0/0:9,0:9:14.63:0,15,88	0/0:17,0:8:1.06:0,1,3	0/1:13,0:9:0.67:1,0,13	0/0:17,1:19:1.76:0,2,175	0/1:15,3:20:33.34:33,0,118	0/0:17,1:18:6.20:0,6,142	0/1:17,16:33:31.96:284,0,32	0/0:26,0:26:31.65:0,32,256	0/0:18,0:19:25.34:0,25,149	0/1:15,2:17:23.92:24,0,99	0/0:15,0:17:28.27:0,28,159	0/0:22,0:25:48:0,48,277	0/1:11,1:12:4.48:4,0,87	0/0:21,1:22:15.96:0,16,208	0/0:23,0:27:1.77:0,2,188	0/0:24,0:25:51.01:0,51,296	0/0:16,1:17:10.07:0,10,167	0/1:15,9:23:19.52:163,0,20	0/1:15,14:28:18.46:163,0,18	1/1:3,5:8:8.99:76,9,0	0/1:7,1:8:13.40:13,0,40	0/0:13,0:13:20.25:0,20,118	0/0:11,0:11:19.72:0,20,120	0/0:20,0:24:33.23:0,33,188	1/1:11,16:27:9.06:279,9,0	0/1:8,16:23:0.06:216,0,0	1/1:6,5:8:17.96:147,18,0
chr10	86482786	.	TG	T	5073.59	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=9.140;DP=732;FS=6.897;HRun=9;HaplotypeScore=94.8455;InbreedingCoeff=0.9923;MQ=70.75;MQ0=1;MQRankSum=0.562;QD=16.21;ReadPosRankSum=2.195;VQSLOD=4.8505;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,23:30:62.67:575,63,0	1/1:1,0:9:12.20:36,12,0	0/0:19,0:19:42.07:0,42,460	0/0:16,0:16:29.65:0,30,317	0/0:19,0:19:45.13:0,45,519	0/0:32,0:31:78.15:0,78,870	0/0:27,0:27:72.18:0,72,802	1/1:6,34:40:92.98:836,93,0	0/0:21,0:21:48.14:0,48,553	1/1:5,0:23:38.70:113,39,0	1/1:1,0:17:30.55:89,31,0	0/0:27,0:27:63.09:0,63,689	0/0:26,0:26:66.15:0,66,744	0/0:31,0:31:81.20:0,81,919	0/0:46,0:46:99:0,105,1135	0/0:37,0:37:93.26:0,93,1061	1/1:2,0:35:50.93:150,51,0	0/0:30,0:30:78.15:0,78,869	1/1:2,13:15:18.21:302,18,0	1/1:5,22:27:63.02:576,63,0	1/1:9,45:54:99:1169,129,0	0/0:14,0:14:36.11:0,36,415	0/0:19,0:19:48.13:0,48,543	0/0:30,0:32:56.63:0,57,868	0/0:22,0:22:41.99:0,42,465	1/1:8,22:30:34.39:540,34,0	1/1:4,23:27:60.02:549,60,0	1/1:0,5:5:15.01:137,15,0
chr10	86483271	.	AG	A	5421.68	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=7.929;DP=640;FS=14.534;HRun=9;HaplotypeScore=68.3348;InbreedingCoeff=0.9852;MQ=77.96;MQ0=0;MQRankSum=-0.856;QD=20.15;ReadPosRankSum=0.669;VQSLOD=4.1350;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:16:36.02:329,36,0	1/1:2,7:9:21.01:192,21,0	0/0:24,1:21:12.61:0,13,313	0/0:22,0:22:28.69:0,29,431	0/0:29,1:30:56.77:0,57,888	0/0:17,1:18:17.64:0,18,438	0/0:23,0:23:56.17:0,56,609	1/1:14,20:34:34.18:447,34,0	0/0:25,0:25:57.10:0,57,641	1/1:7,28:35:78.01:713,78,0	1/1:1,17:18:48.03:439,48,0	0/0:23,0:23:54.11:0,54,585	0/0:21,0:21:57.17:0,57,657	0/0:18,0:18:46.69:0,47,521	0/0:29,1:30:53.86:0,54,860	0/0:32,0:32:69.19:0,69,786	1/1:3,22:25:57.03:521,57,0	0/0:6,0:27:40.28:0,40,262	1/1:3,18:21:54.01:488,54,0	1/1:5,23:28:61.79:546,62,0	1/1:5,22:27:60.02:549,60,0	0/0:19,0:19:48.12:0,48,536	0/0:22,0:22:60.18:0,60,692	0/0:21,0:21:51.15:0,51,588	0/0:14,1:15:8.64:0,9,351	1/1:9,19:28:60:542,60,0	1/1:3,17:20:48.01:436,48,0	1/1:0,8:8:24.01:220,24,0
chr10	86484559	.	TAAACAAAC	T	7078.73	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=14.713;DP=601;FS=8.897;HRun=0;HaplotypeScore=164.2422;InbreedingCoeff=0.9443;MQ=66.72;MQ0=1;MQRankSum=-10.297;QD=29.13;ReadPosRankSum=-0.611;VQSLOD=3.9143;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:24:6.02:112,6,0	1/1:2,4:6:12.04:262,12,0	0/0:34,0:28:33.11:0,33,978	0/0:21,0:18:15.03:0,15,196	0/0:25,0:25:45.15:0,45,1790	0/0:15,0:15:36.11:0,36,1395	0/0:20,0:19:39.12:0,39,1326	1/1:22,7:29:21.05:297,21,0	0/0:15,0:15:36.09:0,36,1293	1/1:12,23:34:63.05:1253,63,0	1/1:7,7:14:11.97:223,12,0	0/0:22,0:22:42.14:0,42,1733	0/0:26,0:26:51.16:0,51,1997	0/0:22,0:22:42.14:0,42,1733	0/0:33,0:33:66.20:0,66,2576	0/0:24,0:24:63.22:0,63,2516	1/1:7,10:17:12.04:268,12,0	0/0:29,0:29:75.19:0,75,2741	1/1:12,12:24:36.04:708,36,0	1/1:4,13:17:33.11:730,33,0	1/1:10,1:11:3.01:39,3,0	0/0:16,0:16:33.10:0,33,1152	0/0:18,0:18:39.10:0,39,1233	0/0:25,0:24:54.19:0,54,2145	0/0:13,0:13:27.08:0,27,894	1/1:7,21:28:63.14:1345,63,0	1/1:10,15:25:54.17:1232,54,0	1/1:4,9:13:24.08:611,24,0
chr10	86484954	.	TA	T	473.56	PASS	AB=0.855;AC=11;AF=0.204;AN=54;BaseQRankSum=4.750;DP=427;FS=0.571;HRun=15;HaplotypeScore=60.8981;InbreedingCoeff=0.4957;MQ=52.56;MQ0=5;MQRankSum=0.049;QD=4.15;ReadPosRankSum=1.966;VQSLOD=0.6566;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:15:17.85:0,18,101	1/1:0,4:4:11.82:77,12,0	0/1:5,0:4:2.89:3,0,41	./.	0/1:21,2:23:1.02:1,0,270	0/0:21,1:22:22.67:0,23,310	0/0:11,0:11:20.96:0,21,175	0/0:36,2:39:35:0,35,504	0/0:11,0:11:23.90:0,24,193	1/1:2,13:15:31.50:198,31,0	1/1:9,12:21:12.94:206,13,0	0/0:12,0:12:27.39:0,27,221	0/0:13,0:16:41.73:0,42,333	0/0:13,1:14:7.88:0,8,189	0/1:8,2:10:11.58:12,0,147	0/0:18,0:18:48.80:0,49,406	0/1:7,10:17:2.90:111,0,3	0/0:20,0:22:32.15:0,32,247	0/0:19,0:19:24.93:0,25,241	0/0:14,0:14:32.16:0,32,260	0/0:10,0:10:21.42:0,21,175	0/0:7,0:6:9:0,9,79	0/0:10,0:10:14.87:0,15,121	0/0:5,0:5:9:0,9,79	0/0:18,1:18:19.70:0,20,287	0/0:27,0:28:45.81:0,46,379	0/0:18,0:18:27.39:0,27,220	0/1:13,2:15:17.53:18,0,111
chr10	86485868	.	TG	T	2344.21	PASS	AB=0.917;AC=30;AF=0.536;AN=56;BaseQRankSum=8.318;DP=527;FS=29.143;HRun=11;HaplotypeScore=84.3114;InbreedingCoeff=0.5450;MQ=77.89;MQ0=1;MQRankSum=-1.531;QD=6.85;ReadPosRankSum=6.859;VQSLOD=-0.1088;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:45:60.66:175,61,0	1/1:5,5:10:14.96:123,15,0	0/0:30,0:26:35.70:0,36,274	0/0:11,0:11:14.82:0,15,110	0/1:19,2:21:15.91:16,0,233	0/1:11,1:12:11.37:11,0,86	0/1:14,2:16:18.81:19,0,184	1/1:10,7:18:20.92:172,21,0	0/0:15,0:15:20.97:0,21,190	1/1:6,10:16:29.95:246,30,0	1/1:4,11:15:20.09:171,20,0	0/0:24,1:25:18.84:0,19,377	0/1:14,2:16:9.88:10,0,90	0/0:21,0:21:30.86:0,31,263	0/0:19,1:20:18.84:0,19,345	0/0:19,1:20:20.39:0,20,378	1/1:10,16:26:8.75:225,9,0	0/0:16,0:17:20.17:0,20,229	1/1:13,4:18:28.77:215,29,0	1/1:9,3:13:20.01:153,20,0	1/1:10,17:27:44.94:369,45,0	0/0:10,0:11:3.48:0,3,33	0/0:13,0:13:12.03:0,12,128	0/1:25,1:26:15.45:15,0,391	0/1:11,1:12:9.56:10,0,112	1/1:12,13:25:41.87:338,42,0	1/1:8,10:18:23.89:192,24,0	1/1:1,3:7:15.10:92,15,0
chr10	86486675	.	TC	T	10429.21	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=15.746;DP=609;FS=3.907;HRun=2;HaplotypeScore=75.8619;InbreedingCoeff=0.9997;MQ=85.38;MQ0=0;MQRankSum=-2.429;QD=36.59;ReadPosRankSum=1.874;VQSLOD=5.6300;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:90.29:1168,90,0	1/1:0,9:9:27.09:350,27,0	0/0:21,0:21:60.20:0,60,855	0/0:19,0:19:53.76:0,54,736	0/0:26,0:26:78.25:0,78,1147	0/0:24,0:24:63.21:0,63,944	0/0:21,0:21:63.21:0,63,944	1/1:0,20:20:60.18:766,60,0	0/0:17,0:17:51.16:0,51,738	1/1:1,30:31:90.29:1168,90,0	1/1:0,17:17:48.16:623,48,0	0/0:23,0:23:69.23:0,69,1033	0/0:23,0:23:63.21:0,63,943	0/0:24,0:24:72.16:0,72,1032	0/0:30,0:30:90.25:0,90,1302	0/0:28,0:28:84.28:0,84,1255	1/1:0,28:28:78.25:1012,78,0	1/1:1,16:17:45.11:564,45,0	1/1:0,9:9:27.09:350,27,0	1/1:0,13:13:36.12:467,36,0	1/1:0,37:37:99:1402,108,0	0/0:12,0:12:33.11:0,33,494	0/0:20,0:20:60.18:0,60,858	0/0:21,0:21:63.20:0,63,925	0/0:15,0:15:45.15:0,45,674	1/1:2,27:29:84.27:1078,84,0	1/1:0,27:27:75.24:973,75,0	1/1:0,13:13:39.13:506,39,0
chr10	86488940	.	TCA	T	701.66	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=6.141;DP=770;FS=12.085;HRun=0;HaplotypeScore=93.1807;InbreedingCoeff=0.6564;MQ=64.73;MQ0=1;MQRankSum=1.168;QD=10.63;ReadPosRankSum=2.565;VQSLOD=2.7696;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,30:37:63.20:795,63,0	0/0:14,0:14:30.09:0,30,463	0/0:25,0:20:38.22:0,38,597	0/0:28,1:24:14.01:0,14,683	0/0:14,0:14:39.12:0,39,611	0/0:15,0:15:41.79:0,42,611	0/0:29,0:29:69.19:0,69,1047	0/0:33,0:33:78.12:0,78,1203	0/0:33,0:33:84.26:0,84,1340	0/0:29,0:29:75.25:0,75,1217	0/0:18,1:19:13.22:0,13,684	0/0:34,0:34:87.27:0,87,1353	0/0:35,0:35:74.37:0,74,1408	0/0:30,0:30:75.04:0,75,1198	0/0:33,2:35:20.60:0,21,1375	0/0:32,0:32:81.09:0,81,1272	0/0:25,0:25:60.16:0,60,921	0/0:25,0:25:60.18:0,60,955	0/0:15,0:15:45.15:0,45,719	0/0:33,0:33:81.26:0,81,1302	0/0:60,1:61:99:0,119,2341	0/0:24,0:24:60.20:0,60,980	0/0:27,0:27:72.24:0,72,1163	0/1:29,0:29:8:8,0,913	0/0:24,0:24:57.18:0,57,916	0/0:30,0:29:81.16:0,81,1255	0/0:26,0:26:72.25:0,72,1184	0/0:7,0:7:21.07:0,21,349
chr10	86489624	.	TGAA	T	8157.09	PASS	AB=0.903;AC=25;AF=0.446;AN=56;BaseQRankSum=13.964;DP=662;FS=0.699;HRun=0;HaplotypeScore=95.6253;InbreedingCoeff=0.9130;MQ=77.27;MQ0=0;MQRankSum=-1.300;QD=26.06;ReadPosRankSum=1.074;VQSLOD=4.9597;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,34:40:81.27:1184,81,0	1/1:2,9:11:23.97:301,24,0	0/0:32,0:30:42.08:0,42,663	0/0:20,0:18:25.90:0,26,437	0/0:20,0:20:39.11:0,39,718	0/0:20,0:20:45.14:0,45,861	0/0:26,0:26:57.20:0,57,1166	1/1:5,24:29:72.16:957,72,0	0/0:30,0:30:60.19:0,60,1164	1/1:6,20:26:60.19:858,60,0	1/1:3,12:15:30.06:412,30,0	0/0:24,1:25:13.23:0,13,927	0/0:21,1:22:7.24:0,7,891	0/0:24,0:24:66.16:0,66,1225	0/0:34,0:34:84.24:0,84,1590	0/1:25,3:28:15.60:16,0,1278	1/1:6,25:31:48.16:702,48,0	0/0:26,1:27:31.34:0,31,1421	1/1:9,7:16:21.07:307,21,0	1/1:3,16:19:48.08:656,48,0	1/1:8,18:26:36.12:526,36,0	0/0:22,0:22:54.13:0,54,1027	0/0:9,0:9:21.07:0,21,430	0/0:19,0:19:54.14:0,54,987	0/0:19,0:19:51.15:0,51,953	1/1:7,31:38:93.28:1316,93,0	1/1:8,15:23:39.13:571,39,0	1/1:3,8:11:24.08:351,24,0
chr10	86490483	.	A	ACCGCC	236.74	PASS	AB=0.667;AC=5;AF=0.167;AN=30;BaseQRankSum=0.400;DP=65;FS=0.000;HRun=0;HaplotypeScore=29.5692;InbreedingCoeff=0.3121;MQ=91.16;MQ0=0;MQRankSum=-1.839;QD=11.84;ReadPosRankSum=-0.719;VQSLOD=1.2849;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:6.01:65,6,0	./.	0/0:2,0:2:2.87:0,3,55	0/0:8,0:6:5.09:0,5,55	0/0:2,0:2:6.01:0,6,82	./.	0/0:8,0:8:15.05:0,15,286	./.	0/0:2,0:2:3.01:0,3,57	./.	./.	./.	0/0:4,0:4:12.01:0,12,187	0/0:2,0:2:3.01:0,3,57	0/0:1,0:1:3:0,3,25	./.	1/1:1,0:1:2.98:22,3,0	0/0:4,0:4:12.04:0,12,229	./.	./.	0/1:8,6:16:4.70:245,0,5	0/0:3,0:3:9:0,9,107	./.	0/0:3,0:3:9.03:0,9,171	0/0:2,0:2:3.01:0,3,49	./.	./.	./.
chr10	86492087	.	C	CAACAAACA	7163.15	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=2.083;DP=635;FS=2.146;HRun=0;HaplotypeScore=176.4495;InbreedingCoeff=0.9667;MQ=72.80;MQ0=3;MQRankSum=-9.024;QD=36.18;ReadPosRankSum=-5.304;VQSLOD=3.2930;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:90.26:0,90,2194	0/0:11,0:11:24.08:0,24,607	0/0:34,0:28:12.04:0,12,255	0/0:28,0:27:20.10:0,20,407	0/0:26,0:26:48.16:0,48,1167	0/0:11,0:11:12.04:0,12,304	0/0:27,0:27:54.15:0,54,1215	1/1:32,0:31:41.95:806,42,0	0/0:11,0:12:21.07:0,21,512	0/0:30,0:30:48.15:0,48,1102	0/0:20,0:21:30.09:0,30,663	0/0:25,0:25:42.13:0,42,987	0/0:14,0:14:33.10:0,33,785	0/0:17,0:17:24.07:0,24,557	0/0:20,0:21:45.10:0,45,916	0/0:18,0:18:33.09:0,33,733	0/0:27,0:27:54.16:0,54,1257	1/1:12,0:27:8.96:222,9,0	1/1:16,0:16:12.66:214,13,0	1/1:10,11:21:27.09:1035,27,0	1/1:17,5:24:12.93:426,13,0	0/0:15,0:15:24.06:0,24,556	0/0:17,0:18:33.11:0,33,790	0/0:20,0:21:48.16:0,48,1156	0/0:17,0:17:36.11:0,36,860	1/1:20,8:32:59.89:1873,60,0	1/1:10,17:32:48.01:1944,48,0	1/1:6,5:13:18.05:643,18,0
chr10	86494444	.	T	TCC	8242.28	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=11.863;DP=692;FS=50.713;HRun=1;HaplotypeScore=129.7851;InbreedingCoeff=0.7132;MQ=89.62;MQ0=0;MQRankSum=-1.300;QD=22.71;ReadPosRankSum=-0.228;VQSLOD=0.5778;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:42,1:43:78.20:944,78,0	1/1:11,0:11:33.10:411,33,0	0/0:23,0:23:63.21:0,63,932	0/0:31,0:31:80.38:0,80,1187	0/1:18,0:18:14.52:15,0,422	0/1:20,0:20:8.81:9,0,509	0/0:18,0:18:45.15:0,45,663	1/1:26,2:28:77.67:866,78,0	0/0:32,0:32:72.24:0,72,1090	1/1:27,1:28:70.14:711,70,0	1/1:16,1:17:30.05:349,30,0	0/0:37,0:37:46.24:0,46,974	0/0:19,0:19:33.11:0,33,497	0/0:32,0:32:60.20:0,60,910	0/0:43,0:43:99:0,102,1517	0/0:28,0:28:75.22:0,75,1076	1/1:30,0:30:81.25:997,81,0	0/0:28,0:28:57.19:0,57,872	1/1:14,0:14:39.06:409,39,0	1/1:21,0:21:50.99:562,51,0	1/1:31,0:31:78.24:940,78,0	0/1:27,0:27:52.05:52,0,559	0/1:12,0:12:21.90:22,0,235	0/0:32,0:32:63.21:0,63,962	0/0:6,0:6:12.04:0,12,182	1/1:30,1:31:90.02:929,90,0	1/1:29,0:29:75.23:915,75,0	1/1:3,0:3:9.03:111,9,0
chr10	86494445	.	C	CCA	13735.96	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=-12.885;DP=701;FS=43.045;HRun=0;HaplotypeScore=110.0005;InbreedingCoeff=0.7452;MQ=89.39;MQ0=0;MQRankSum=-2.007;QD=37.12;ReadPosRankSum=-0.560;VQSLOD=2.6579;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,37:41:78.22:1540,78,0	1/1:1,11:12:33.11:669,33,0	0/0:24,0:24:65.89:0,66,887	0/0:30,0:30:74.99:0,75,1197	0/1:18,0:18:23.85:24,0,468	0/1:19,0:19:5.81:6,0,566	0/0:19,0:19:45.14:0,45,686	1/1:3,25:30:84.24:1530,84,0	0/0:33,0:33:72.24:0,72,1154	1/1:2,24:29:75.19:1292,75,0	1/1:2,16:19:27.09:548,27,0	0/0:35,0:35:46.24:0,46,1012	0/0:20,0:20:36.12:0,36,569	0/0:32,0:32:60.18:0,60,936	0/0:43,0:43:99:0,100,1546	0/0:29,0:29:75.24:0,75,1164	1/1:0,30:30:81.28:1644,81,0	0/0:28,0:28:57.19:0,57,925	1/1:1,13:15:42.08:731,42,0	1/1:3,19:23:48.04:852,48,0	1/1:1,32:33:81.25:1606,81,0	0/1:25,0:25:23.91:24,0,639	0/1:11,0:11:1.92:2,0,274	0/0:31,0:31:66.22:0,66,1067	0/0:7,0:7:12.04:0,12,196	1/1:2,27:32:93.13:1505,93,0	1/1:1,29:30:78.27:1580,78,0	1/1:0,3:3:9.03:183,9,0
chr10	86496771	.	GCACACACACACACA	G	1278.25	PASS	AB=0.909;AC=16;AF=0.348;AN=46;BaseQRankSum=5.101;DP=391;FS=0.000;HRun=0;HaplotypeScore=129.1299;InbreedingCoeff=0.5863;MQ=49.84;MQ0=21;MQRankSum=-2.578;QD=10.31;ReadPosRankSum=1.297;VQSLOD=2.4739;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:12.90:0,13,229	1/1:3,0:5:3.01:98,3,0	./.	./.	0/0:14,0:14:16.96:0,17,942	0/0:12,0:12:18.06:0,18,1072	0/0:25,0:23:22.43:0,22,1280	0/1:16,0:15:7.98:12,0,8	0/0:12,0:12:12.04:0,12,683	./.	1/1:4,0:9:3.01:98,3,0	0/0:20,0:19:21.06:0,21,1029	0/0:7,0:8:15.05:0,15,734	0/0:13,0:12:9.50:0,10,594	0/0:7,0:7:6.02:0,6,228	0/0:17,0:17:20.71:0,21,1111	1/1:12,0:15:6.02:195,6,0	1/1:5,5:10:6.02:234,6,0	1/1:10,8:18:23.77:387,24,0	1/1:5,7:12:3.01:117,3,0	1/1:20,0:17:6.01:75,6,0	0/0:6,0:6:3.01:0,3,201	0/0:7,0:7:6.02:0,6,401	0/0:20,0:31:30.10:0,30,1371	0/0:20,0:20:29.97:0,30,1709	0/1:14,4:17:6.57:218,0,7	./.	./.
chr10	86497032	.	TA	T	2450.26	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.038;DP=336;FS=6.077;HRun=9;HaplotypeScore=47.2266;InbreedingCoeff=0.8460;MQ=60.73;MQ0=5;MQRankSum=-0.091;QD=18.42;ReadPosRankSum=-0.463;VQSLOD=3.2299;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:78.11:0,78,849	0/0:9,0:9:24.07:0,24,277	0/0:12,0:5:1.87:0,2,45	0/0:8,0:3:4.43:0,4,20	0/0:16,0:15:39:0,39,421	0/0:13,0:13:36.11:0,36,414	0/0:8,0:8:24.06:0,24,267	1/1:13,20:29:65.49:580,65,0	0/0:8,0:8:18.04:0,18,197	0/0:4,0:4:9.03:0,9,104	0/0:6,0:6:15.03:0,15,164	0/0:7,0:7:15.04:0,15,173	0/0:4,0:3:9.03:0,9,104	0/0:7,0:7:18.02:0,18,177	0/0:3,0:3:9.03:0,9,104	0/0:12,0:11:21.05:0,21,232	0/0:18,1:18:20.74:0,21,468	0/0:18,0:18:45.13:0,45,519	1/1:9,16:25:53.20:458,53,0	1/1:2,9:10:24.01:219,24,0	1/1:1,5:6:15.01:137,15,0	0/0:4,0:4:12.02:0,12,128	0/0:2,0:2:6.01:0,6,59	0/0:1,0:1:3.01:0,3,35	0/0:9,0:9:23.99:0,24,247	1/1:8,18:26:53.86:480,54,0	1/1:1,13:14:36:328,36,0	1/1:2,16:17:48.03:439,48,0
chr10	86500915	.	T	TTAA	3010.89	PASS	AC=22;AF=0.458;AN=48;BaseQRankSum=-6.987;DP=208;FS=0.678;HRun=0;HaplotypeScore=29.7957;InbreedingCoeff=0.7726;MQ=65.65;MQ0=1;MQRankSum=-0.901;QD=27.13;ReadPosRankSum=-0.408;VQSLOD=3.2470;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:36.12:0,36,510	1/1:3,2:5:6.02:121,6,0	1/1:5,0:4:2.68:11,3,0	0/0:3,0:3:4.81:0,5,28	0/0:8,0:8:15.05:0,15,205	0/0:10,0:10:27.05:0,27,353	0/0:3,0:3:6.02:0,6,81	1/1:10,11:21:33.11:593,33,0	0/0:3,0:3:3.01:0,3,42	1/1:0,1:1:3.01:60,3,0	1/1:3,4:7:12.51:243,13,0	0/0:4,0:4:9.02:0,9,112	0/0:6,0:6:5.99:0,6,63	0/0:7,0:7:15.05:0,15,213	0/0:4,0:4:6.01:0,6,67	0/0:5,0:5:6.02:0,6,85	1/1:3,19:23:39.13:785,39,0	0/0:20,0:20:45.08:0,45,588	1/1:8,6:13:18.06:334,18,0	1/1:3,5:8:14.98:239,15,0	./.	./.	./.	./.	0/0:7,0:7:12.04:0,12,169	1/1:4,4:9:12.02:205,12,0	1/1:4,3:8:12.04:240,12,0	1/1:0,10:10:18.06:362,18,0
chr10	86501181	.	AGAG	A	854.35	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.900;DP=504;FS=4.448;HRun=0;HaplotypeScore=73.0432;InbreedingCoeff=0.9509;MQ=62.15;MQ0=17;MQRankSum=-0.007;QD=34.17;ReadPosRankSum=2.309;VQSLOD=4.1398;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:60.20:949,60,0	0/0:7,0:7:21.06:0,21,404	0/0:45,0:12:17.06:0,17,212	0/0:76,0:22:15.51:0,16,223	0/0:16,0:16:42.14:0,42,912	0/0:29,0:29:84.16:0,84,1730	0/0:15,0:15:42.06:0,42,807	0/0:23,0:21:48.16:0,48,998	0/0:6,0:6:18.06:0,18,393	0/0:18,0:18:54.18:0,54,1091	0/0:9,0:9:24.08:0,24,520	0/0:9,0:9:27.09:0,27,588	0/0:11,0:11:24.07:0,24,483	0/0:13,0:13:36.12:0,36,774	0/0:12,0:12:33.10:0,33,665	0/0:18,0:18:48.16:0,48,1046	0/0:22,0:22:57.17:0,57,1163	0/0:23,0:23:63.15:0,63,1264	0/0:12,0:12:33.11:0,33,676	0/0:12,0:12:36.12:0,36,776	0/0:13,0:13:33.10:0,33,635	0/0:8,0:8:24.08:0,24,523	0/0:8,0:9:24.08:0,24,524	0/0:11,0:11:27.09:0,27,582	0/0:14,0:14:39.13:0,39,823	0/0:24,0:24:69.24:0,69,1475	0/0:16,0:15:45.12:0,45,897	0/0:7,0:7:21.07:0,21,441
chr10	86501759	.	G	GAC	9707.49	PASS	AB=0.638;AC=45;AF=0.804;AN=56;BaseQRankSum=-2.581;DP=494;FS=7.095;HRun=0;HaplotypeScore=80.5273;InbreedingCoeff=0.2142;MQ=51.45;MQ0=56;MQRankSum=0.238;QD=26.74;ReadPosRankSum=1.451;VQSLOD=5.7766;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:7,17:27:7.97:532,0,8	1/1:0,4:5:11.98:154,12,0	0/0:60,2:10:3.01:0,3,35	0/0:58,2:8:3:0,3,28	1/1:4,10:14:21.07:336,21,0	0/1:3,6:9:6.59:222,0,7	1/1:5,15:19:9.50:633,9,0	1/1:10,1:6:3.01:36,3,0	1/1:5,17:21:9.15:635,9,0	0/1:13,17:29:6.11:853,0,6	1/1:2,17:19:39.13:623,39,0	0/1:2,12:14:22.32:398,0,22	1/1:0,13:13:33.11:527,33,0	1/1:2,16:19:12.21:683,12,0	1/1:1,14:15:33.11:527,33,0	1/1:0,10:11:24.08:384,24,0	1/1:9,18:26:54.10:831,54,0	1/1:3,11:14:36.02:569,36,0	1/1:9,1:7:3.01:48,3,0	0/0:4,0:5:0.47:0,0,1	0/1:8,1:8:0.02:0,0,0	1/1:2,13:16:6.16:554,6,0	1/1:2,6:8:12.04:192,12,0	1/1:8,10:19:29.84:443,30,0	1/1:0,15:15:30.10:480,30,0	1/1:2,0:2:2.96:19,3,0	1/1:3,0:3:2.92:17,3,0	1/1:6,0:6:2.74:12,3,0
chr10	86501767	.	C	CATAAAG	309.48	PASS	AB=0.901;AC=7;AF=0.125;AN=56;BaseQRankSum=1.080;DP=566;FS=20.762;HRun=0;HaplotypeScore=143.4876;InbreedingCoeff=0.4492;MQ=46.66;MQ0=80;MQRankSum=-1.496;QD=12.38;ReadPosRankSum=-3.164;VQSLOD=0.5830;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:42.03:0,42,446	0/0:5,0:5:11.89:0,12,107	0/0:86,0:9:14.21:0,14,305	0/0:82,0:6:12.02:0,12,195	0/0:14,0:14:33.06:0,33,417	0/0:10,0:10:21.04:0,21,285	0/0:25,0:23:51.06:0,51,602	0/1:9,2:4:58.13:68,0,58	0/0:22,0:21:48.10:0,48,563	0/0:33,0:32:83.80:0,84,1167	0/0:19,0:19:45.10:0,45,543	0/0:19,0:18:45.08:0,45,562	0/0:14,0:14:36.07:0,36,411	0/0:20,0:20:51.11:0,51,613	0/0:16,0:16:33.07:0,33,344	0/0:13,0:13:30.07:0,30,394	0/0:30,0:29:69.15:0,69,831	0/0:16,0:16:38.99:0,39,456	0/0:5,0:3:3.01:0,3,34	0/1:5,0:5:0.03:0,0,0	0/0:13,0:11:0.47:0,0,1	0/0:18,0:18:47.99:0,48,591	0/0:8,0:8:15.04:0,15,201	0/0:25,0:24:35.27:0,35,431	0/0:16,0:16:33.07:0,33,363	1/1:0,1:1:3.01:109,3,0	1/1:0,2:2:6.02:137,6,0	0/1:5,1:6:45.63:112,0,46
chr10	86501798	.	TGACACACACATAAA	T	349.36	PASS	AB=0.835;AC=3;AF=0.054;AN=56;BaseQRankSum=5.672;DP=602;FS=8.712;HRun=0;HaplotypeScore=249.5045;InbreedingCoeff=-0.0817;MQ=46.06;MQ0=64;MQRankSum=-3.911;QD=5.29;ReadPosRankSum=-1.932;VQSLOD=0.5495;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,2:29:65.80:0,66,2488	0/0:7,0:7:17.80:0,18,887	0/0:76,0:16:37.70:0,38,1247	0/0:84,0:14:36.12:0,36,1126	0/0:10,0:10:27.09:0,27,1194	0/0:12,0:12:30.10:0,30,1949	0/0:27,0:26:63.21:0,63,2958	0/0:10,0:5:6.02:0,6,219	0/0:22,0:21:54.18:0,54,2715	0/0:29,0:28:81.27:0,81,4545	0/0:13,0:13:30.01:0,30,1137	0/0:27,0:25:69.23:0,69,3733	0/0:19,0:19:57.19:0,57,2920	0/0:18,0:18:51.17:0,51,2639	0/0:23,0:23:57.19:0,57,3133	0/0:17,0:17:45.15:0,45,2157	0/1:29,1:29:43.97:44,0,3602	0/1:17,3:20:99:313,0,2085	0/0:4,0:3:6.02:0,6,213	0/0:5,0:5:3.48:0,3,41	0/1:8,8:14:91.63:92,0,165	0/0:27,0:27:72.24:0,72,3368	0/0:7,0:7:12.04:0,12,641	0/0:32,4:35:6.66:0,7,2835	0/0:15,0:15:36.12:0,36,2303	0/0:10,0:9:23.78:0,24,445	0/0:2,0:2:6.02:0,6,126	0/0:5,0:5:12.04:0,12,260
chr10	86501929	.	G	GAC	1292.25	PASS	AB=0.866;AC=12;AF=0.214;AN=56;BaseQRankSum=0.759;DP=824;FS=15.767;HRun=0;HaplotypeScore=245.6533;InbreedingCoeff=0.2620;MQ=45.55;MQ0=53;MQRankSum=-5.894;QD=4.68;ReadPosRankSum=-1.726;VQSLOD=1.2304;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:23.70:0,24,230	0/0:4,0:3:3.01:0,3,36	0/0:61,0:7:11.18:0,11,139	0/1:66,0:10:18.76:19,0,26	0/0:14,1:17:25.45:0,25,258	0/0:20,0:19:23.58:0,24,242	0/0:34,0:34:75.17:0,75,871	1/1:30,7:22:1.94:371,2,0	0/0:41,0:40:78:0,78,887	0/0:30,0:32:65.46:0,65,761	0/0:14,0:13:17.92:0,18,216	0/0:49,0:49:84.95:0,85,1028	0/0:30,0:29:53.86:0,54,604	0/0:35,0:36:59.83:0,60,683	0/0:47,0:49:86.05:0,86,939	0/0:36,0:39:80.74:0,81,896	0/0:34,0:35:18.64:0,19,644	0/0:20,0:20:39.10:0,39,451	0/1:8,3:7:9.62:177,0,10	1/1:3,6:8:3.01:48,3,0	0/1:45,19:58:81.92:184,0,82	0/0:10,0:9:21.05:0,21,240	0/0:5,0:7:11.73:0,12,101	0/1:51,1:52:8.11:8,0,651	0/0:11,0:11:21.05:0,21,240	1/1:9,10:17:30.10:479,30,0	0/1:6,1:6:9.48:117,0,9	0/1:3,1:3:29.95:42,0,30
chr10	86501954	.	G	GAC	1486.31	PASS	AB=0.787;AC=8;AF=0.148;AN=54;BaseQRankSum=-0.310;DP=1028;FS=4.813;HRun=0;HaplotypeScore=219.2040;InbreedingCoeff=0.2559;MQ=43.02;MQ0=87;MQRankSum=-5.511;QD=5.27;ReadPosRankSum=-4.453;VQSLOD=2.1228;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:33:5.81:0,6,45	0/0:5,0:4:3.01:0,3,36	0/1:105,0:6:0:0,0,0	0/0:105,0:9:3.01:0,3,36	0/0:19,0:20:27.41:0,27,270	0/0:21,0:22:44.94:0,45,501	0/0:45,0:43:62.98:0,63,719	0/1:29,7:28:4.19:370,0,4	0/0:44,0:43:99:0,102,1185	0/0:52,0:47:84.82:0,85,896	0/0:17,0:16:22.18:0,22,254	0/0:59,0:58:99:0,102,1178	0/0:34,0:35:68.26:0,68,735	0/0:39,0:40:70.69:0,71,757	0/0:47,0:49:98.86:0,99,1122	0/0:42,0:43:83.89:0,84,902	0/0:39,0:37:60.76:0,61,946	0/0:22,0:23:25.07:0,25,464	0/1:11,4:9:59.23:84,0,59	./.	0/1:51,25:68:5.04:230,0,5	0/0:21,0:19:35.36:0,35,335	0/0:10,0:10:21.02:0,21,223	0/0:50,0:49:71.89:0,72,837	0/0:11,0:11:27.01:0,27,296	0/1:14,13:24:30.82:608,0,31	0/1:5,5:11:11.77:180,0,12	1/1:2,3:5:9.03:143,9,0
chr10	86501969	.	ACACAGG	A	122.64	PASS	AB=0.957;AC=7;AF=0.125;AN=56;BaseQRankSum=6.006;DP=1071;FS=5.293;HRun=0;HaplotypeScore=256.1324;InbreedingCoeff=0.1873;MQ=40.80;MQ0=124;MQRankSum=-2.631;QD=0.47;ReadPosRankSum=-4.558;VQSLOD=1.6921;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:24,9:31:8.92:99,0,9	0/0:4,0:4:2.98:0,3,106	1/1:89,0:5:3.01:47,3,0	0/1:100,0:6:38.67:39,0,39	0/0:26,0:22:19.03:0,19,708	0/0:24,0:24:44.12:0,44,1492	0/0:41,0:37:84.78:0,85,2384	0/0:36,0:27:26.93:0,27,646	0/0:47,0:46:99:0,108,3223	0/0:57,0:45:67.76:0,68,2289	0/1:15,0:16:4.56:5,0,626	0/0:69,0:67:99:0,131,3874	0/0:37,0:37:77.46:0,77,2271	0/0:41,0:41:79.83:0,80,2261	0/0:56,0:55:99:0,129,3571	0/0:50,0:50:99:0,105,2659	0/0:40,0:38:26.80:0,27,2707	0/0:25,0:24:60.16:0,60,1700	0/0:12,0:7:11.27:0,11,295	0/1:17,0:15:0:0,0,0	0/0:78,0:61:1.28:0,1,450	0/0:24,0:22:22.99:0,23,1122	0/0:12,0:12:24.03:0,24,601	0/0:65,0:63:99:0,112,2925	0/0:18,0:17:35.98:0,36,879	0/0:33,0:26:8.20:0,8,1146	0/0:12,0:12:19.14:0,19,444	0/1:6,0:6:47.20:47,0,72
chr10	86501996	.	GCAGACA	G	1073.85	PASS	AB=0.991;AC=11;AF=0.204;AN=54;BaseQRankSum=8.783;DP=1034;FS=0.576;HRun=0;HaplotypeScore=229.2259;InbreedingCoeff=-0.0938;MQ=42.45;MQ0=134;MQRankSum=-7.538;QD=3.60;ReadPosRankSum=-3.745;VQSLOD=1.6219;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:40:28:28,0,325	1/1:2,0:2:2.84:14,3,0	0/0:87,0:6:18.06:0,18,400	0/0:101,0:9:17.66:0,18,388	0/1:22,2:21:10.63:11,0,875	0/0:21,0:21:57.15:0,57,1700	0/0:46,1:42:82.85:0,83,2445	0/1:33,0:20:99:148,0,668	0/0:39,0:38:89.87:0,90,2516	0/1:54,0:41:99:498,0,1416	0/1:14,0:14:27.88:28,0,327	0/0:67,1:65:99:0,126,3913	0/0:37,0:35:77.82:0,78,2342	0/0:45,1:46:53.62:0,54,2630	0/0:41,0:40:99:0,108,3055	0/0:41,1:41:77.77:0,78,2086	0/0:30,0:29:61:0,61,1236	0/0:23,0:22:57.16:0,57,1661	0/1:15,0:7:68.98:69,0,310	./.	0/1:81,0:62:18.97:19,0,828	0/0:31,0:29:64.10:0,64,1895	0/0:14,0:13:21.05:0,21,530	0/0:65,0:62:87.51:0,88,4125	0/0:18,0:18:30.05:0,30,853	0/1:29,0:22:99:276,0,940	0/0:9,0:9:14.45:0,14,344	0/1:5,0:5:95.65:127,0,96
chr10	86501997	.	CAG	C	129.72	PASS	AB=0.880;AC=4;AF=0.074;AN=54;BaseQRankSum=7.338;DP=1035;FS=12.552;HRun=0;HaplotypeScore=190.6050;InbreedingCoeff=0.2561;MQ=42.39;MQ0=136;MQRankSum=-3.571;QD=1.80;ReadPosRankSum=-2.110;VQSLOD=1.4219;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,7:40:99:149,0,117	1/1:2,0:2:2.97:20,3,0	0/0:89,0:6:11.20:0,11,195	0/0:103,0:9:17.40:0,17,245	0/0:24,0:21:31.26:0,31,435	0/0:21,0:21:57.11:0,57,899	0/0:46,0:41:85.95:0,86,1370	0/0:34,1:22:32.84:0,33,437	0/0:37,0:36:89.23:0,89,1287	0/0:51,1:39:30.39:0,30,815	0/0:15,0:15:4.94:0,5,98	0/0:68,0:65:99:0,128,2122	0/0:36,0:35:56.22:0,56,1174	0/0:45,0:45:31.16:0,31,1333	0/0:41,0:40:99:0,107,1582	0/0:43,0:42:46.84:0,47,1051	0/1:26,3:28:61.80:62,0,552	0/0:23,0:22:25.96:0,26,760	0/0:14,0:7:18.31:0,18,134	./.	0/0:80,2:62:27.68:0,28,420	0/0:33,0:31:24.07:0,24,940	0/0:14,0:13:20.86:0,21,285	0/0:65,0:62:90.71:0,91,2088	0/0:19,0:18:29.88:0,30,473	0/0:29,0:22:34.22:0,34,471	0/0:9,0:9:14.45:0,14,194	0/0:5,0:5:7.54:0,8,70
chr10	86501999	.	GACACAC	G	1797.05	PASS	AB=0.805;AC=8;AF=0.148;AN=54;BaseQRankSum=7.228;DP=1058;FS=3.946;HRun=0;HaplotypeScore=232.6446;InbreedingCoeff=-0.1497;MQ=42.27;MQ0=137;MQRankSum=-7.650;QD=6.40;ReadPosRankSum=-3.631;VQSLOD=1.8376;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,9:42:39.63:40,0,377	0/0:1,0:1:1.55:0,2,4	0/0:96,0:6:18.06:0,18,419	0/0:107,0:9:15.04:0,15,406	0/0:25,0:22:13.37:0,13,915	0/0:22,0:22:51.18:0,51,1564	0/0:48,0:44:76.82:0,77,2186	0/1:26,11:25:99:344,0,648	0/0:37,0:37:77.04:0,77,2323	0/1:40,13:41:99:757,0,1313	0/1:11,5:16:46.12:46,0,295	0/0:67,0:67:99:0,120,3698	0/0:35,0:34:74.84:0,75,2179	0/0:45,0:46:88.72:0,89,2541	0/0:41,0:40:96.07:0,96,2770	0/0:44,0:44:77.56:0,78,1965	0/0:30,0:28:44.40:0,44,990	0/0:19,0:21:54.18:0,54,1512	0/1:12,2:7:99:113,0,253	./.	0/1:70,8:63:35.42:35,0,732	0/0:31,0:31:66.16:0,66,1813	0/0:14,0:13:18.06:0,18,471	0/0:61,0:61:95.58:0,96,3804	0/0:19,0:18:27.07:0,27,767	0/1:23,6:23:99:412,0,784	0/0:7,2:9:9.03:0,9,298	0/1:3,2:5:84.01:184,0,84
chr10	86502152	.	CAG	C	304.66	PASS	AB=0.994;AC=8;AF=0.148;AN=54;BaseQRankSum=9.132;DP=1029;FS=13.543;HRun=0;HaplotypeScore=160.7401;InbreedingCoeff=0.0308;MQ=47.26;MQ0=154;MQRankSum=0.972;QD=1.17;ReadPosRankSum=-2.726;VQSLOD=1.1270;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:37:62.66:0,63,1139	0/1:6,0:2:11.51:12,0,19	./.	0/0:69,0:4:3:0,3,55	0/0:15,0:11:18.06:0,18,325	0/0:17,0:16:20.81:0,21,477	0/0:46,0:44:99:0,111,1721	0/0:30,0:10:26.98:0,27,235	0/0:50,0:46:99:0,112,1869	0/0:32,0:26:30.68:0,31,527	0/0:9,0:5:5.37:0,5,34	0/0:64,0:62:99:0,158,2479	0/0:29,0:29:50.68:0,51,912	0/0:43,0:42:95.95:0,96,1613	0/0:43,0:42:99:0,100,1871	0/0:39,0:39:96.14:0,96,1590	0/1:56,0:50:99:163,0,498	0/0:36,0:36:68.69:0,69,1464	1/1:11,0:7:0.82:38,1,0	0/0:12,0:8:7.98:0,8,65	0/1:135,5:120:99:194,0,944	0/0:28,0:23:30.06:0,30,508	0/0:14,0:9:18.02:0,18,267	0/0:67,0:64:99:0,154,2517	0/0:19,0:16:33.07:0,33,559	0/1:29,0:20:4.14:4,0,374	0/1:12,0:9:6.68:7,0,61	0/1:6,0:4:4.45:4,0,9
chr10	86502154	.	GAC	G	2278.02	PASS	AB=0.904;AC=14;AF=0.259;AN=54;BaseQRankSum=3.743;DP=1038;FS=19.011;HRun=0;HaplotypeScore=157.3543;InbreedingCoeff=0.4923;MQ=47.30;MQ0=157;MQRankSum=2.205;QD=7.47;ReadPosRankSum=-5.528;VQSLOD=0.7880;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:41,1:40:61.34:0,61,739	1/1:5,1:2:3.01:36,3,0	./.	0/0:72,0:4:2.84:0,3,38	0/0:16,0:12:18.06:0,18,289	0/0:18,0:17:25.28:0,25,383	0/0:46,0:44:81.25:0,81,1254	0/0:26,0:8:2.98:0,3,21	0/0:50,2:48:53.99:0,54,1425	0/1:32,0:26:44.10:44,0,153	0/1:10,0:5:0:0,0,0	0/0:66,0:64:99:0,124,1882	0/0:29,0:29:31.24:0,31,735	0/0:44,0:43:80.88:0,81,1258	0/0:44,0:43:89.85:0,90,1422	0/0:38,0:38:77.85:0,78,1203	0/1:35,17:47:99:612,0,150	0/0:35,0:35:70.47:0,70,1138	1/1:9,2:7:9.03:107,9,0	1/1:11,1:8:2.86:20,3,0	1/1:106,33:122:87.54:1440,88,0	0/0:28,0:24:26.36:0,26,395	0/0:15,0:10:18.02:0,18,240	0/0:68,0:65:99:0,132,2024	0/0:20,0:17:36.11:0,36,548	0/1:22,4:19:99:119,0,141	1/1:10,2:9:5.97:56,6,0	0/0:6,0:4:1.55:0,2,4
chr10	86502272	.	GCA	G	5646.90	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=6.414;DP=1091;FS=1.893;HRun=0;HaplotypeScore=158.8297;InbreedingCoeff=0.7652;MQ=52.76;MQ0=33;MQRankSum=0.203;QD=14.59;ReadPosRankSum=-0.263;VQSLOD=4.9158;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:31:19.05:0,19,818	0/0:5,1:5:3:0,3,26	0/1:88,0:11:10.23:10,0,100	0/0:96,0:18:25.21:0,25,278	0/0:15,0:15:11.34:0,11,519	0/0:19,1:20:4.21:0,4,585	0/0:44,1:45:32.63:0,33,1608	1/1:9,24:25:47.96:577,48,0	0/0:39,0:39:84.23:0,84,1314	0/0:51,0:50:90.66:0,91,1679	0/0:16,0:16:18.06:0,18,299	0/0:47,0:47:82.04:0,82,1651	0/0:36,0:36:84.64:0,85,1398	0/0:44,0:43:72.64:0,73,1671	0/0:29,0:29:60.19:0,60,962	0/0:24,0:24:69.24:0,69,1136	0/0:41,0:38:77.98:0,78,1239	0/0:41,0:40:95.98:0,96,1499	1/1:7,10:14:30.05:359,30,0	1/1:2,12:14:5.97:76,6,0	1/1:78,93:162:99:3396,276,0	0/0:27,0:27:69.23:0,69,1099	0/1:15,0:15:7.08:7,0,427	0/0:71,1:72:99:0,142,2845	0/0:22,0:22:35.70:0,36,580	1/1:15,16:29:22.12:768,22,0	1/1:2,8:10:21.07:265,21,0	1/1:1,7:8:15.05:189,15,0
chr10	86502285	.	CAG	C	1578.89	PASS	AB=0.991;AC=11;AF=0.196;AN=56;BaseQRankSum=14.249;DP=1073;FS=7.499;HRun=0;HaplotypeScore=172.3111;InbreedingCoeff=0.3748;MQ=51.70;MQ0=33;MQRankSum=0.779;QD=4.49;ReadPosRankSum=0.882;VQSLOD=2.4145;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:43.06:0,43,922	0/0:7,0:5:2.60:0,3,10	0/1:69,1:10:12.97:13,0,46	0/0:82,0:16:21.88:0,22,253	0/0:16,0:15:39.11:0,39,666	0/0:19,0:19:31.52:0,32,702	0/0:48,0:48:99:0,104,2058	0/1:33,0:25:99:122,0,114	0/0:41,0:41:98.74:0,99,1580	0/0:55,0:54:70.56:0,71,1834	0/0:17,0:17:3.06:0,3,365	0/0:47,0:47:99:0,113,1917	0/0:35,0:35:85.40:0,85,1508	0/0:48,0:46:86.14:0,86,1925	0/0:28,0:28:72.14:0,72,1148	0/0:27,0:27:75.18:0,75,1256	0/0:37,0:34:79.15:0,79,1366	0/0:39,0:38:95.45:0,95,1639	1/1:19,0:11:8.06:127,8,0	0/1:14,0:14:16.91:18,0,17	1/1:152,11:152:80.26:1016,80,0	0/0:28,0:28:76.89:0,77,1219	0/0:17,0:17:13.84:0,14,571	0/0:77,0:77:99:0,155,3406	0/0:19,0:19:38.35:0,38,621	0/1:31,1:30:47.72:269,0,48	1/1:8,0:8:20.15:113,20,0	0/1:12,0:11:58.27:61,0,58
chr10	86502338	.	GCA	G	2301.31	PASS	AB=0.863;AC=19;AF=0.339;AN=56;BaseQRankSum=2.585;DP=796;FS=7.617;HRun=0;HaplotypeScore=143.7452;InbreedingCoeff=0.1693;MQ=47.74;MQ0=18;MQRankSum=1.597;QD=5.65;ReadPosRankSum=-1.760;VQSLOD=2.5848;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:27:26.27:0,26,429	1/1:6,0:6:0.45:1,0,0	0/0:32,0:2:3.01:0,3,47	0/0:38,0:5:4.83:0,5,49	1/1:10,10:19:3.08:140,3,0	0/1:9,1:10:22.09:22,0,178	0/1:36,2:38:30.97:31,0,956	0/1:21,7:24:1.51:300,0,2	0/0:30,1:31:53.78:0,54,829	0/0:43,0:38:57.10:0,57,833	0/0:10,0:10:11.72:0,12,170	0/0:44,0:44:68.71:0,69,982	0/0:20,1:21:8.71:0,9,534	0/1:31,1:32:46.67:47,0,729	0/0:19,0:19:45.15:0,45,726	0/0:27,0:27:39.18:0,39,714	0/0:32,0:29:36.86:0,37,552	0/0:27,0:26:48.16:0,48,759	0/1:16,4:9:32.74:130,0,33	1/1:9,5:14:15.04:169,15,0	1/1:65,54:112:44.66:994,45,0	0/0:18,0:18:39.07:0,39,555	0/1:16,1:17:9.31:9,0,345	0/1:48,3:51:22.18:22,0,986	0/0:14,0:14:18.06:0,18,249	0/1:18,9:24:75.31:322,0,75	0/1:4,4:8:41.07:94,0,41	1/1:11,4:13:2.98:186,3,0
chr10	86502356	.	ACG	A	943.43	PASS	AB=0.988;AC=15;AF=0.268;AN=56;BaseQRankSum=9.905;DP=800;FS=7.532;HRun=0;HaplotypeScore=155.2015;InbreedingCoeff=-0.1295;MQ=49.80;MQ0=18;MQRankSum=0.674;QD=2.31;ReadPosRankSum=1.489;VQSLOD=1.9284;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:22.62:0,23,503	0/0:5,0:5:0.45:0,0,1	0/1:45,0:6:12.76:13,0,63	0/1:51,1:10:18.89:19,0,41	0/1:20,0:19:47.25:136,0,47	0/0:16,1:17:2.67:0,3,311	0/0:38,0:38:45.75:0,46,1261	0/1:26,0:23:90.93:91,0,133	0/0:34,0:34:80.66:0,81,1094	0/0:42,0:38:53.23:0,53,1043	0/0:8,0:8:9.03:0,9,172	0/0:46,0:46:78.89:0,79,1129	0/0:22,0:22:44.21:0,44,690	0/0:32,1:33:2.28:0,2,843	0/0:23,0:23:43.08:0,43,888	0/1:25,1:26:4.48:4,0,781	0/1:25,0:23:0.73:1,0,543	0/1:29,0:29:7.51:8,0,888	0/1:17,1:12:55.31:55,0,74	1/1:13,1:14:14.47:140,14,0	0/1:85,0:80:35.87:318,0,36	0/0:26,0:26:50.56:0,51,660	0/0:18,0:18:25.61:0,26,459	0/0:54,0:54:82.39:0,82,1460	0/1:12,0:12:20.48:20,0,220	0/1:32,1:29:99:143,0,171	0/1:10,0:10:36.89:37,0,57	0/1:11,0:11:3.56:109,0,4
chr10	86502362	.	G	GCA	1358.58	PASS	AB=0.851;AC=7;AF=0.130;AN=54;BaseQRankSum=1.943;DP=794;FS=7.781;HRun=0;HaplotypeScore=154.5778;InbreedingCoeff=0.5502;MQ=49.89;MQ0=25;MQRankSum=-5.054;QD=9.77;ReadPosRankSum=-2.695;VQSLOD=2.4587;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:13,9:23:28.30:221,0,28	0/1:4,1:5:0:0,0,0	0/1:54,0:10:11.03:11,0,92	0/0:65,0:11:6.50:0,7,151	0/0:22,0:21:28.26:0,28,319	0/0:16,0:16:33.57:0,34,408	0/0:36,0:37:77.89:0,78,929	0/0:25,0:22:42.96:0,43,487	0/0:34,0:34:60:0,60,706	1/1:23,14:35:56.39:874,56,0	./.	0/0:39,0:40:73.15:0,73,835	0/0:21,0:21:48.01:0,48,561	0/0:28,0:29:52.28:0,52,599	0/0:24,0:24:48.06:0,48,540	0/0:23,0:25:56.31:0,56,616	1/1:8,8:17:26.12:385,26,0	0/0:28,0:29:49.11:0,49,526	0/0:18,0:13:16.73:0,17,194	0/0:14,0:14:2.88:0,3,24	0/0:83,0:78:65.82:0,66,773	0/0:22,0:24:35.43:0,35,394	0/0:19,0:19:28.14:0,28,318	0/0:54,0:56:99:0,102,1213	0/0:10,0:11:17.54:0,18,218	0/0:27,0:28:22.82:0,23,536	0/0:9,0:10:14.34:0,14,162	0/0:9,0:12:10.87:0,11,131
chr10	86502390	.	GAC	G	1462.65	PASS	AB=0.784;AC=11;AF=0.196;AN=56;BaseQRankSum=3.589;DP=867;FS=7.559;HRun=0;HaplotypeScore=154.3460;InbreedingCoeff=0.2523;MQ=53.91;MQ0=45;MQRankSum=-4.945;QD=4.69;ReadPosRankSum=-1.935;VQSLOD=1.6971;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,7:19:0.01:0,0,0	0/0:1,0:1:3.01:0,3,49	0/1:76,0:13:4.05:4,0,118	0/0:111,0:23:26:0,26,271	0/0:23,0:23:45.15:0,45,738	0/0:16,0:16:30.08:0,30,461	0/0:39,0:39:87.26:0,87,1363	0/1:24,5:23:99:177,0,112	0/0:29,1:31:63.18:0,63,980	0/0:50,0:48:99:0,114,1512	0/0:9,0:9:12.04:0,12,197	0/0:28,0:28:57.19:0,57,931	0/0:21,0:21:42.14:0,42,687	0/0:27,0:27:56.78:0,57,793	0/0:17,0:17:45.14:0,45,710	0/0:21,0:21:63.18:0,63,965	0/0:26,0:26:43.99:0,44,634	0/0:7,0:20:41.88:0,42,387	0/1:14,5:15:3.11:144,0,3	1/1:8,6:14:14.99:186,15,0	0/1:64,32:90:45.16:196,0,45	0/0:24,0:24:48.14:0,48,736	0/0:18,0:18:33.09:0,33,509	0/0:57,0:57:99:0,126,2018	0/0:13,1:14:27.07:0,27,413	0/1:18,19:33:93.20:599,0,93	0/1:5,4:9:42.03:128,0,42	1/1:7,4:11:0.95:170,1,0
chr10	86502407	.	T	TG	540.51	PASS	AB=0.844;AC=6;AF=0.107;AN=56;BaseQRankSum=5.993;DP=810;FS=5.254;HRun=0;HaplotypeScore=146.9349;InbreedingCoeff=-0.1350;MQ=51.38;MQ0=29;MQRankSum=-6.687;QD=4.29;ReadPosRankSum=-1.562;VQSLOD=2.4945;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,2:14:2.43:0,2,20	0/0:4,0:4:9.49:0,9,113	0/0:49,0:8:4.51:0,5,173	0/0:85,0:18:29.98:0,30,301	0/0:23,0:22:54.18:0,54,755	0/0:13,0:13:30.10:0,30,419	0/0:38,0:38:99:0,99,1367	0/1:12,9:18:99:278,0,304	0/0:28,0:28:69.23:0,69,958	0/0:58,3:57:50.13:0,50,1601	0/0:10,0:10:15.05:0,15,210	0/0:27,0:27:69.23:0,69,952	0/0:18,0:18:48.16:0,48,670	0/0:24,0:24:69.23:0,69,940	0/0:20,0:20:60.20:0,60,834	0/0:23,0:23:63.21:0,63,877	0/1:23,3:26:55.68:56,0,642	0/0:19,0:19:54.02:0,54,647	0/1:18,1:12:20.74:21,0,268	0/0:14,0:13:28.33:0,28,393	0/0:97,8:97:45.46:0,45,551	0/0:19,0:19:45.14:0,45,603	0/0:19,0:19:36.11:0,36,486	0/0:55,0:55:99:0,145,1988	0/0:12,0:12:29.83:0,30,400	0/1:31,8:34:99:233,0,637	0/1:5,1:6:29.86:30,0,109	0/1:12,3:15:47.34:47,0,144
chr10	86502410	.	GAC	G	55.46	PASS	AB=0.880;AC=4;AF=0.071;AN=56;BaseQRankSum=6.633;DP=813;FS=2.190;HRun=0;HaplotypeScore=159.3142;InbreedingCoeff=0.3697;MQ=50.70;MQ0=28;MQRankSum=-4.803;QD=0.65;ReadPosRankSum=-1.859;VQSLOD=2.2658;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,8:15:2.68:8,3,0	0/1:4,1:5:3.52:35,0,4	0/0:42,0:6:12.03:0,12,170	0/0:78,1:17:12.89:0,13,156	0/0:23,0:22:51.17:0,51,854	0/0:13,0:13:24.08:0,24,404	0/0:37,0:37:78.26:0,78,1283	0/0:21,0:18:30.10:0,30,495	0/0:27,0:27:62.82:0,63,1038	0/1:59,5:59:99:108,0,1145	0/0:10,0:10:14.26:0,14,115	0/0:28,0:28:68.86:0,69,1015	0/0:18,0:18:45.15:0,45,746	0/0:24,0:24:63.14:0,63,992	0/0:20,0:20:57.17:0,57,910	0/0:23,0:23:60.19:0,60,992	0/0:26,0:26:21.64:0,22,174	0/0:19,1:20:8.77:0,9,643	0/0:20,0:12:28.10:0,28,398	0/0:14,0:13:30.10:0,30,508	0/0:108,0:101:47.61:0,48,764	0/0:18,1:19:6.14:0,6,648	0/0:17,0:17:36.07:0,36,576	0/0:56,0:56:99:0,150,2413	0/0:14,0:13:32.70:0,33,457	0/0:40,0:35:71.13:0,71,963	0/0:8,0:9:20.82:0,21,227	0/0:15,0:15:19.38:0,19,229
chr10	86502422	.	GAC	G	1366.47	PASS	AB=0.841;AC=7;AF=0.125;AN=56;BaseQRankSum=2.529;DP=844;FS=6.039;HRun=0;HaplotypeScore=154.1531;InbreedingCoeff=0.1742;MQ=46.57;MQ0=29;MQRankSum=-3.504;QD=8.49;ReadPosRankSum=0.044;VQSLOD=2.5902;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:17:1.78:2,0,18	0/1:8,2:8:22.53:69,0,23	0/0:32,0:3:6.02:0,6,101	0/0:64,0:13:5.72:0,6,104	0/0:22,0:21:45.09:0,45,697	0/0:14,1:15:30.09:0,30,465	0/0:33,0:33:69.21:0,69,1123	0/0:20,0:19:41.85:0,42,636	0/0:28,0:28:59.31:0,59,932	0/1:60,18:70:99:811,0,709	1/1:10,3:13:12.02:127,12,0	0/0:36,0:36:86.84:0,87,1305	0/0:19,0:19:34.99:0,35,544	0/0:25,0:25:69.22:0,69,1099	0/0:18,0:18:54.12:0,54,843	0/0:22,0:22:66.19:0,66,1051	0/1:12,17:27:21.73:470,0,22	0/0:18,0:18:35.63:0,36,606	0/0:27,0:19:34.47:0,34,470	0/0:16,0:14:33.11:0,33,547	0/0:120,1:108:56.68:0,57,940	0/0:19,0:19:47.68:0,48,686	0/0:18,0:18:36.11:0,36,579	0/0:56,0:56:99:0,106,1990	0/1:12,1:12:14.51:15,0,330	0/0:39,0:34:60.39:0,60,860	0/0:14,0:14:26.92:0,27,334	0/0:17,0:16:25.92:0,26,306
chr10	86502433	.	ACG	A	811.65	PASS	AB=0.978;AC=8;AF=0.143;AN=56;BaseQRankSum=8.425;DP=869;FS=5.952;HRun=0;HaplotypeScore=162.2085;InbreedingCoeff=0.2322;MQ=44.54;MQ0=25;MQRankSum=-6.039;QD=3.71;ReadPosRankSum=0.247;VQSLOD=2.5904;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:4.97:0,5,56	0/1:15,0:13:28.93:56,0,29	0/0:34,0:5:1.25:0,1,124	0/0:46,1:7:8.90:0,9,113	0/0:18,0:17:42.13:0,42,710	0/0:16,0:16:35.96:0,36,595	0/0:36,1:37:86.98:0,87,1410	0/0:24,0:22:19.85:0,20,760	0/0:25,0:25:58.59:0,59,1047	0/1:86,1:80:99:465,0,564	1/1:13,1:14:9.02:105,9,0	0/0:32,0:32:90.23:0,90,1598	0/0:20,0:20:24.85:0,25,602	0/0:26,0:26:75.16:0,75,1320	0/0:21,0:21:57.07:0,57,960	0/0:25,0:24:66.23:0,66,1216	1/1:29,0:27:2.26:240,2,0	0/0:14,0:14:18.08:0,18,666	0/1:25,0:16:34.87:35,0,446	0/0:23,0:22:36.08:0,36,648	0/0:132,2:123:61.04:0,61,1116	0/0:18,0:17:44.92:0,45,766	0/0:17,0:17:36.12:0,36,658	0/0:51,0:51:99:0,126,2196	0/0:14,0:13:15.31:0,15,451	0/1:46,0:41:42.88:43,0,851	0/0:14,0:14:23.91:0,24,346	0/0:17,0:16:3.97:0,4,322
chr10	86502439	.	GCA	G	128.49	PASS	AB=0.900;AC=6;AF=0.107;AN=56;BaseQRankSum=4.642;DP=885;FS=0.738;HRun=0;HaplotypeScore=165.2614;InbreedingCoeff=0.1580;MQ=43.79;MQ0=27;MQRankSum=-2.265;QD=0.97;ReadPosRankSum=-0.159;VQSLOD=2.3525;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,6:22:9.49:111,9,0	0/0:21,0:18:12.38:0,12,242	0/0:33,0:4:8.76:0,9,80	0/0:41,0:7:2.98:0,3,21	0/1:13,1:13:12.54:13,0,288	0/0:15,0:15:27.01:0,27,423	0/0:34,0:33:63.21:0,63,1015	0/0:27,0:22:45.14:0,45,689	0/0:26,0:26:54.15:0,54,857	0/0:89,1:83:94.95:0,95,2013	0/0:17,0:17:15.05:0,15,214	0/0:35,0:35:87.24:0,87,1333	0/1:16,4:19:34.16:34,0,491	0/0:28,0:28:67.11:0,67,1053	0/0:21,0:21:11.74:0,12,688	0/0:21,0:20:16.68:0,17,674	0/0:28,0:27:46.78:0,47,739	0/0:15,0:15:24.08:0,24,389	0/0:28,1:17:1.11:0,1,364	0/1:21,3:22:3.50:3,0,433	0/0:136,2:129:47.63:0,48,763	0/0:18,0:17:36.10:0,36,568	0/0:16,0:16:20.69:0,21,314	0/1:49,3:51:83.85:84,0,1255	0/0:15,1:15:27.07:0,27,411	0/0:45,2:39:4.10:0,4,918	0/0:15,0:14:27.08:0,27,430	0/0:15,0:14:24.05:0,24,362
chr10	86502459	.	GCA	G	859.91	PASS	AB=0.878;AC=8;AF=0.143;AN=56;BaseQRankSum=6.268;DP=968;FS=10.320;HRun=0;HaplotypeScore=183.4212;InbreedingCoeff=-0.1596;MQ=42.76;MQ0=37;MQRankSum=-6.237;QD=2.82;ReadPosRankSum=-2.093;VQSLOD=1.7963;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:30:27.38:0,27,436	0/1:15,8:20:29.56:30,0,221	0/1:25,0:6:0.31:0,0,59	0/0:36,0:4:3.01:0,3,50	0/0:16,0:15:36.11:0,36,568	0/0:19,0:18:23.99:0,24,405	0/0:36,0:35:66.69:0,67,1108	0/1:33,3:32:37.92:38,0,878	0/0:18,0:18:41.82:0,42,643	0/1:74,22:89:99:572,0,1168	0/1:21,7:28:29.66:30,0,92	0/0:39,0:39:92.52:0,93,1492	0/0:19,0:18:39.13:0,39,639	0/0:28,0:27:32.89:0,33,997	0/0:17,0:17:42.14:0,42,708	0/0:15,0:14:29.83:0,30,497	0/1:30,8:32:99:272,0,547	0/1:13,0:12:5.95:6,0,123	0/1:40,2:22:38.57:39,0,439	0/0:27,2:28:13.15:0,13,437	0/0:151,2:135:43.45:0,43,635	0/0:22,0:20:36.12:0,36,602	0/0:16,0:16:29.73:0,30,478	0/0:49,0:48:93.25:0,93,1474	0/0:14,0:13:31.31:0,31,468	0/0:60,2:57:43.81:0,44,1712	0/0:15,0:16:26.78:0,27,335	0/0:17,0:15:26.92:0,27,394
chr10	86502505	.	GCA	G	308.22	PASS	AB=0.958;AC=13;AF=0.232;AN=56;BaseQRankSum=1.913;DP=748;FS=0.821;HRun=0;HaplotypeScore=145.0525;InbreedingCoeff=0.1490;MQ=40.77;MQ0=45;MQRankSum=0.585;QD=1.16;ReadPosRankSum=-0.311;VQSLOD=2.5649;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,1:25:0.02:1,0,0	1/1:10,1:9:2.59:10,3,0	0/0:18,0:2:0.89:0,1,2	0/0:23,0:2:0.47:0,0,1	0/0:15,0:15:15.02:0,15,197	0/1:22,0:21:11.87:12,0,215	0/0:32,0:31:6.02:0,6,88	0/0:32,0:23:14.98:0,15,176	0/1:11,1:12:12.46:12,0,227	0/1:50,3:45:17.76:74,0,18	0/1:17,0:17:0:0,0,0	0/0:34,0:33:20.93:0,21,318	0/0:19,0:18:21.49:0,21,287	0/0:26,0:24:5.63:0,6,88	0/1:17,2:19:37.21:37,0,334	0/1:14,1:14:10.66:11,0,234	1/1:28,6:30:24.54:262,25,0	0/0:14,0:14:24.67:0,25,281	0/0:19,0:15:19.17:0,19,175	0/0:21,0:21:13.15:0,13,99	0/0:122,0:108:31.77:0,32,268	0/0:23,0:22:21.05:0,21,295	0/0:11,0:11:9.03:0,9,133	0/1:31,1:32:6.42:6,0,331	0/1:17,0:17:21.48:21,0,123	0/0:42,1:38:5.43:0,5,315	0/0:15,0:14:6.22:0,6,62	0/0:10,0:7:14.97:0,15,136
chr10	86502793	.	TCAAAACAAAA	T	1671.54	PASS	AB=0.963;AC=9;AF=0.161;AN=56;BaseQRankSum=6.909;DP=648;FS=5.814;HRun=0;HaplotypeScore=180.2425;InbreedingCoeff=0.7517;MQ=56.90;MQ0=5;MQRankSum=-6.754;QD=20.14;ReadPosRankSum=0.172;VQSLOD=1.8748;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:25:37.94:0,38,1425	1/1:5,3:7:6.02:176,6,0	0/0:28,0:13:2.37:0,2,8	0/0:37,0:19:7.73:0,8,78	0/0:20,0:20:33.08:0,33,1282	0/0:21,0:21:51.13:0,51,1767	0/0:31,0:31:57.20:0,57,2538	0/0:23,0:23:27.07:0,27,731	0/0:30,0:30:72.23:0,72,2935	1/1:10,12:22:33.11:986,33,0	1/1:5,3:8:6.02:179,6,0	0/0:14,0:14:33.11:0,33,1388	0/0:21,0:21:57.16:0,57,2262	0/0:18,0:18:45.15:0,45,2030	0/0:26,0:26:54.18:0,54,2326	0/0:25,0:25:42.14:0,42,1872	1/1:7,12:19:15.05:439,15,0	0/0:40,0:40:84.21:0,84,3144	0/0:16,0:14:24.08:0,24,1106	0/0:15,0:15:27.09:0,27,1061	0/0:29,0:29:51.18:0,51,2546	0/0:22,0:22:45.15:0,45,1933	0/0:26,0:26:48.15:0,48,2087	0/0:29,0:29:72.23:0,72,3115	0/0:18,0:18:24.08:0,24,1053	0/1:25,1:26:41.52:42,0,2009	0/0:34,0:34:69.23:0,69,2882	0/0:17,0:17:36.12:0,36,1463
chr10	86503154	.	GGA	G	223.13	PASS	AB=0.959;AC=18;AF=0.346;AN=52;BaseQRankSum=3.369;DP=659;FS=1.510;HRun=0;HaplotypeScore=98.5614;InbreedingCoeff=-0.0536;MQ=65.73;MQ0=19;MQRankSum=1.694;QD=0.65;ReadPosRankSum=2.335;VQSLOD=1.2356;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,2:28:9.78:42,0,10	0/1:9,0:9:0:0,0,0	./.	./.	0/1:16,0:15:14.92:15,0,83	0/1:16,0:17:9.70:10,0,113	0/1:23,2:25:8.24:8,0,277	0/0:23,0:23:17.79:0,18,119	0/1:22,3:24:58.20:58,0,285	1/1:31,0:32:3.56:13,4,0	1/1:12,0:14:7.38:41,7,0	0/1:21,0:20:19.78:20,0,257	0/1:13,2:15:14.91:15,0,140	0/0:24,0:24:10.87:0,11,497	0/0:25,0:26:9.63:0,10,236	0/1:30,0:30:86.57:87,0,272	1/1:24,0:25:3.73:16,4,0	0/0:27,0:26:17.53:0,18,492	0/0:18,0:18:14.89:0,15,121	0/0:18,0:16:8.97:0,9,71	0/0:17,0:14:0:0,0,0	0/1:25,0:25:11.65:12,0,57	0/1:11,0:11:19.25:19,0,73	0/1:47,1:48:16.19:16,0,460	0/0:14,0:19:9.01:0,9,92	0/0:30,0:25:31.19:0,31,274	0/0:31,0:30:32.88:0,33,306	0/0:16,0:15:7.19:0,7,44
chr10	86503202	.	CGCGCGT	C	2822.89	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=11.192;DP=701;FS=1.961;HRun=0;HaplotypeScore=149.3537;InbreedingCoeff=0.5486;MQ=65.75;MQ0=39;MQRankSum=-6.736;QD=10.65;ReadPosRankSum=-1.274;VQSLOD=2.6522;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:27:8.80:186,9,0	0/1:12,0:12:7.53:71,0,8	0/0:21,0:14:39.61:0,40,1218	0/0:25,0:15:38.74:0,39,849	0/0:23,0:23:53.06:0,53,1309	0/0:20,0:19:54.12:0,54,1345	0/0:34,0:34:96.33:0,96,2734	1/1:29,0:27:50.05:713,50,0	0/0:39,0:37:99:0,103,2736	1/1:24,0:22:49.56:658,50,0	1/1:16,0:15:11.99:145,12,0	0/0:34,0:31:84.29:0,84,2309	0/0:17,0:17:48.15:0,48,1283	0/0:33,0:30:84.24:0,84,2220	0/0:23,0:20:48.16:0,48,1463	0/0:27,0:27:62.65:0,63,1827	1/1:25,0:23:15:176,15,0	0/0:38,0:36:95.01:0,95,1636	0/1:12,0:10:24.17:235,0,24	1/1:20,0:17:9.03:108,9,0	1/1:32,0:29:0.47:1,0,0	0/0:21,0:21:45.15:0,45,1329	0/0:14,0:13:33.05:0,33,857	0/0:45,0:43:99:0,108,3248	0/0:22,0:22:42.14:0,42,1191	0/1:27,0:22:99:398,0,177	0/1:21,0:20:99:204,0,177	0/1:18,0:16:88.42:115,0,88
chr10	86503204	.	CGCGT	C	4634.94	PASS	AB=0.600;AC=23;AF=0.411;AN=56;BaseQRankSum=7.187;DP=697;FS=9.450;HRun=0;HaplotypeScore=122.2193;InbreedingCoeff=0.8539;MQ=68.97;MQ0=37;MQRankSum=-6.764;QD=17.96;ReadPosRankSum=-1.993;VQSLOD=3.8213;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:24:8.63:108,9,0	1/1:1,11:12:8.75:113,9,0	0/0:23,0:16:42.62:0,43,957	0/0:27,0:17:44.82:0,45,737	0/0:24,0:24:44.27:0,44,952	0/0:19,0:18:45.11:0,45,914	0/0:35,0:35:99:0,100,2050	1/1:3,25:26:68.89:1099,69,0	0/0:36,0:34:93.18:0,93,1893	1/1:3,19:21:57.17:991,57,0	1/1:2,13:14:8.86:151,9,0	0/0:33,0:31:74.53:0,75,1656	0/0:19,0:19:51.09:0,51,968	0/0:35,0:32:81.65:0,82,1591	0/0:23,0:20:51.09:0,51,1089	0/0:26,0:26:58.33:0,58,1342	1/1:2,23:23:15.05:240,15,0	0/0:40,0:38:55.49:0,55,814	1/1:6,7:11:20.89:427,21,0	1/1:5,14:17:9.03:146,9,0	1/1:5,32:34:0.47:1,0,0	0/0:18,0:18:48.15:0,48,1022	0/0:15,0:14:23.39:0,23,645	0/0:44,0:42:99:0,101,2351	0/0:22,0:22:41.97:0,42,807	1/1:18,8:22:13.38:766,13,0	1/1:12,5:17:13.21:366,13,0	0/1:6,12:16:49.47:227,0,49
chr10	86503815	.	GA	G	1159.36	PASS	AB=0.786;AC=26;AF=0.464;AN=56;BaseQRankSum=8.362;DP=495;FS=0.000;HRun=15;HaplotypeScore=66.2626;InbreedingCoeff=0.5628;MQ=54.76;MQ0=15;MQRankSum=-0.293;QD=4.44;ReadPosRankSum=2.978;VQSLOD=1.0947;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,22:43:0.57:234,1,0	0/1:1,7:9:8.64:78,0,9	0/1:11,1:4:0.82:1,0,13	0/0:15,0:8:8.67:0,9,57	0/1:17,2:17:6.53:7,0,180	0/0:15,2:14:4.64:0,5,148	0/0:21,2:21:7.65:0,8,175	1/1:3,0:17:26.24:76,26,0	0/0:6,0:6:5.99:0,6,50	1/1:7,15:23:23.86:254,24,0	1/1:7,8:17:22.20:139,22,0	0/0:20,1:17:16.57:0,17,220	0/0:14,0:14:20.94:0,21,169	0/0:13,0:12:1.63:0,2,113	0/0:14,1:17:3.83:0,4,170	0/0:11,2:12:1.70:0,2,132	1/1:6,21:31:33.86:310,34,0	0/0:30,3:31:43.26:0,43,430	1/1:5,0:11:14.23:41,14,0	1/1:5,0:11:12.19:35,12,0	1/1:4,0:14:12.02:35,12,0	0/0:17,0:17:30.36:0,30,253	0/1:8,3:9:23.54:24,0,62	0/0:27,0:25:38.98:0,39,340	0/0:15,1:16:5.60:0,6,160	1/1:2,0:12:16.76:48,17,0	1/1:6,0:15:16.21:47,16,0	1/1:1,0:6:8.15:24,8,0
chr10	86504249	.	A	AGT	4776.83	PASS	AB=0.796;AC=24;AF=0.429;AN=56;BaseQRankSum=-10.082;DP=622;FS=0.908;HRun=0;HaplotypeScore=100.0195;InbreedingCoeff=0.5414;MQ=53.05;MQ0=7;MQRankSum=-1.444;QD=14.26;ReadPosRankSum=1.560;VQSLOD=4.3131;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,15:42:4.81:353,0,5	1/1:2,2:4:6.02:93,6,0	0/0:27,0:10:14.94:0,15,144	0/0:19,0:9:15.04:0,15,166	0/0:22,0:22:29.57:0,30,319	0/0:19,0:19:24.07:0,24,276	0/0:22,0:24:26.91:0,27,289	0/1:24,8:29:73.29:294,0,73	0/0:17,0:19:50.81:0,51,545	1/1:12,17:30:5.60:686,6,0	0/1:10,15:25:7.51:314,0,8	0/0:32,0:34:16.18:0,16,582	0/1:20,1:21:13.42:13,0,312	0/0:21,0:22:50.98:0,51,565	0/0:22,0:24:50.64:0,51,525	0/0:25,0:26:53.99:0,54,600	1/1:8,14:23:1.76:476,2,0	0/1:11,10:21:70.38:339,0,70	1/1:15,7:22:24.08:363,24,0	1/1:8,10:19:27.04:391,27,0	1/1:5,11:17:18.06:279,18,0	0/0:8,0:7:9.03:0,9,103	0/1:24,0:26:0.28:0,0,417	0/0:21,0:23:56.83:0,57,613	0/0:16,0:18:32.76:0,33,337	1/1:14,12:26:39.08:571,39,0	1/1:5,10:16:30.10:465,30,0	1/1:4,4:8:9.03:139,9,0
chr10	86504565	.	T	TCCCCAGCCC	5734.96	PASS	AB=0.636;AC=13;AF=0.232;AN=56;BaseQRankSum=-4.715;DP=511;FS=1.917;HRun=0;HaplotypeScore=120.4046;InbreedingCoeff=0.8399;MQ=65.24;MQ0=31;MQRankSum=-9.730;QD=59.74;ReadPosRankSum=-3.074;VQSLOD=4.0717;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:28:63.22:0,63,1750	0/0:12,0:11:30.10:0,30,854	0/0:15,0:11:26.04:0,26,649	0/0:22,0:15:31.12:0,31,768	0/0:16,0:15:39.13:0,39,1026	0/0:19,0:19:57.20:0,57,1601	0/0:25,0:22:54.15:0,54,1409	1/1:10,6:14:26.96:626,27,0	0/0:16,0:15:45.15:0,45,1240	0/0:24,0:24:66.23:0,66,1878	0/0:13,0:13:33.05:0,33,829	0/0:21,0:21:63.22:0,63,1768	0/0:17,0:15:39.13:0,39,1109	0/0:19,0:19:51.17:0,51,1427	0/0:18,0:17:45.14:0,45,1220	0/0:22,0:21:54.18:0,54,1533	0/0:41,0:39:99:0,111,3155	0/0:18,0:14:36.07:0,36,958	1/1:7,3:9:15.05:547,15,0	1/1:7,0:7:8.99:226,9,0	1/1:5,1:5:6.02:280,6,0	0/0:13,0:13:39.13:0,39,1107	0/0:16,0:16:36.12:0,36,981	0/0:24,0:23:66.23:0,66,1834	0/0:12,0:11:27.09:0,27,769	0/1:9,12:20:31.27:2155,0,31	1/1:3,16:21:36.12:1619,36,0	1/1:7,3:7:6.02:281,6,0
chr10	86505107	.	GAGAGAC	G	837.88	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=3.620;DP=540;FS=17.348;HRun=0;HaplotypeScore=115.7022;InbreedingCoeff=0.4499;MQ=61.78;MQ0=22;MQRankSum=-0.161;QD=3.35;ReadPosRankSum=-0.612;VQSLOD=0.9976;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:12.85:13,0,367	1/1:4,0:4:5.64:36,6,0	0/1:42,0:15:3.75:4,0,91	0/1:62,0:16:17.46:17,0,85	0/0:14,0:14:4.90:0,5,102	0/1:22,0:22:65.45:65,0,398	0/0:20,0:19:43.32:0,43,394	0/0:16,0:14:38.02:0,38,316	0/0:12,4:16:26.77:0,27,253	1/1:15,0:14:39.03:362,39,0	1/1:13,0:13:17.98:150,18,0	0/0:24,0:24:56.80:0,57,926	0/0:19,0:19:52.81:0,53,812	0/0:17,0:16:38.88:0,39,535	0/0:12,0:12:27:0,27,294	0/0:15,0:15:42.01:0,42,467	1/1:26,0:23:7.21:265,7,0	1/1:3,24:27:3.01:68,3,0	0/0:15,0:15:16.71:0,17,301	0/0:12,0:12:16.73:0,17,198	0/0:12,0:11:18:0,18,275	0/0:14,0:14:12.95:0,13,266	0/1:16,0:15:27.41:27,0,159	0/0:20,0:20:23.25:0,23,284	0/0:15,0:15:35.73:0,36,408	0/0:25,0:24:10.71:0,11,564	0/0:9,0:8:9.48:0,9,207	0/0:15,0:13:29.77:0,30,343
chr10	86505109	.	GAGAC	G	971.79	PASS	AB=0.964;AC=18;AF=0.321;AN=56;BaseQRankSum=5.092;DP=537;FS=29.370;HRun=0;HaplotypeScore=99.7563;InbreedingCoeff=0.2662;MQ=61.66;MQ0=22;MQRankSum=-0.828;QD=3.27;ReadPosRankSum=-2.404;VQSLOD=-0.2488;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:44.82:0,45,392	1/1:4,0:4:5.64:36,6,0	0/1:41,0:14:3.96:4,0,91	0/1:62,0:16:17.42:17,0,84	0/1:9,6:15:73.36:82,0,73	0/1:21,0:21:47.80:48,0,300	0/0:18,1:18:7.24:0,7,275	0/0:17,0:15:40.22:0,40,324	0/0:15,0:15:6.71:0,7,172	1/1:14,0:13:39.03:362,39,0	1/1:13,0:13:17.98:150,18,0	0/0:23,0:23:18.86:0,19,680	0/0:19,0:19:47.26:0,47,567	0/0:15,0:14:38.88:0,39,452	0/0:14,0:14:5:0,5,198	0/0:15,0:15:41.98:0,42,398	1/1:25,0:22:16.16:266,16,0	1/1:26,0:26:3.01:37,3,0	0/0:14,0:14:16.05:0,16,280	0/0:13,0:13:18.55:0,19,179	0/1:13,0:12:1.95:2,0,205	0/0:14,0:14:12.95:0,13,233	0/1:16,0:15:82.65:83,0,129	0/1:21,0:21:39.46:39,0,210	0/0:15,0:15:35.73:0,36,341	0/1:26,0:25:19.88:20,0,450	0/0:9,0:8:3.12:0,3,137	0/0:15,0:13:29.72:0,30,291
chr10	86505113	.	CAG	C	237.50	PASS	AB=0.987;AC=18;AF=0.346;AN=52;BaseQRankSum=2.850;DP=550;FS=11.494;HRun=0;HaplotypeScore=91.7148;InbreedingCoeff=0.3561;MQ=58.97;MQ0=23;MQRankSum=1.117;QD=0.87;ReadPosRankSum=-0.251;VQSLOD=0.9939;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:25:2.45:9,2,0	0/0:4,0:4:0:0,0,0	./.	0/1:60,0:14:0:0,0,0	0/1:16,0:16:0.97:15,0,1	0/1:21,0:23:11.64:12,0,30	0/1:23,0:22:5.31:5,0,17	0/0:22,0:20:3.76:0,4,16	1/1:14,0:14:2.80:13,3,0	0/0:15,0:14:2.80:0,3,13	./.	0/0:23,0:23:7.67:0,8,195	0/0:19,0:19:24:0,24,254	0/1:19,0:18:5.35:5,0,143	1/1:12,0:12:9.87:73,10,0	1/1:15,2:16:16.30:125,16,0	0/0:24,0:21:6.27:0,6,33	0/1:26,0:26:6.93:7,0,14	0/0:17,0:17:3.37:0,3,17	0/0:13,0:13:3.01:0,3,41	0/0:13,0:12:5.84:0,6,54	0/0:14,0:14:3.01:0,3,34	1/1:14,0:16:11.15:45,11,0	1/1:15,6:21:10.77:79,11,0	0/0:15,0:15:5.99:0,6,48	0/0:25,0:24:14.99:0,15,142	0/0:9,0:8:9.72:0,10,61	0/0:15,0:13:11.95:0,12,94
chr10	86505162	.	AGT	A	2855.48	PASS	AB=0.892;AC=26;AF=0.464;AN=56;BaseQRankSum=-1.831;DP=502;FS=43.233;HRun=0;HaplotypeScore=82.1627;InbreedingCoeff=0.6339;MQ=67.00;MQ0=12;MQRankSum=1.483;QD=11.95;ReadPosRankSum=-2.862;VQSLOD=1.2519;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:32.05:0,32,369	1/1:5,0:5:14.98:125,15,0	0/0:28,0:15:31.25:0,31,343	0/0:60,0:29:20.78:0,21,329	0/0:13,0:13:1.84:0,2,140	0/0:21,0:21:39.75:0,40,327	0/0:21,0:21:18.54:0,19,358	1/1:18,0:16:46.14:402,46,0	0/0:15,0:15:9.06:0,9,182	1/1:17,0:16:43.48:381,43,0	1/1:4,0:4:11.99:100,12,0	0/0:17,0:17:21.30:0,21,335	0/0:13,0:13:17.87:0,18,314	0/0:10,0:10:16.10:0,16,295	0/1:14,5:19:43.49:43,0,200	0/1:11,2:12:87.43:87,0,124	1/1:26,0:23:54.37:408,54,0	0/0:24,0:23:45.15:0,45,333	1/1:9,0:9:26.69:209,27,0	1/1:12,0:11:2.07:102,2,0	1/1:22,0:22:35.93:342,36,0	0/0:8,0:8:23.98:0,24,228	0/1:16,0:15:2.21:2,0,153	0/1:18,2:20:27.23:27,0,123	0/0:6,0:6:2.04:0,2,65	1/1:5,17:22:14.61:344,15,0	1/1:13,0:13:24.30:170,24,0	1/1:23,0:21:38.55:319,39,0
chr10	86505863	.	C	CT	2789.04	PASS	AB=0.794;AC=24;AF=0.444;AN=54;BaseQRankSum=7.356;DP=474;FS=2.001;HRun=11;HaplotypeScore=67.9499;InbreedingCoeff=0.8375;MQ=68.96;MQ0=10;MQRankSum=-1.832;QD=11.07;ReadPosRankSum=-0.173;VQSLOD=3.1112;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:24:35.45:379,35,0	1/1:1,3:4:12.02:120,12,0	0/0:27,0:9:13.70:0,14,77	0/1:30,0:19:9.10:9,0,103	0/0:27,0:27:59.65:0,60,460	0/0:12,0:12:26.89:0,27,209	0/0:13,0:14:28.88:0,29,210	1/1:14,0:27:48.63:259,49,0	0/0:14,0:13:32.87:0,33,255	1/1:7,17:24:50.56:474,51,0	1/1:3,18:21:48.09:485,48,0	0/0:16,0:16:35.85:0,36,277	0/0:12,0:12:20.89:0,21,162	0/0:19,0:19:44.81:0,45,348	0/0:15,0:15:41.01:0,41,304	0/0:14,0:14:35.78:0,36,271	0/1:6,14:20:18.47:363,0,18	0/0:24,1:24:32.22:0,32,423	1/1:9,0:19:34.12:175,34,0	1/1:3,0:9:17.19:91,17,0	1/1:0,0:5:8.99:43,9,0	./.	0/0:7,0:7:17.93:0,18,139	0/0:9,0:11:19.01:0,19,128	0/0:8,0:8:20.91:0,21,162	1/1:9,4:25:48.95:322,49,0	1/1:4,0:18:31.56:172,32,0	1/1:9,0:17:22.68:113,23,0
chr10	86508332	.	G	GC	8125.66	PASS	AB=0.778;AC=22;AF=0.393;AN=56;BaseQRankSum=-13.570;DP=659;FS=10.779;HRun=0;HaplotypeScore=53.1281;InbreedingCoeff=0.8465;MQ=57.20;MQ0=55;MQRankSum=-0.550;QD=32.76;ReadPosRankSum=-0.396;VQSLOD=3.2783;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:28:81.09:0,81,1024	1/1:0,10:10:24.08:384,24,0	0/1:16,0:7:21.75:22,0,37	0/0:23,0:7:17.92:0,18,195	0/0:16,0:8:15.05:0,15,199	0/0:16,0:13:35.99:0,36,456	0/0:35,0:23:66.22:0,66,923	0/1:3,12:10:52.64:304,0,53	0/0:26,0:24:69.23:0,69,965	1/1:3,18:16:48.16:768,48,0	1/1:0,9:10:30.10:466,30,0	0/0:26,0:20:60.20:0,60,837	0/0:23,0:20:60.17:0,60,805	0/0:35,0:28:84.28:0,84,1169	0/0:46,0:38:99:0,108,1481	0/0:30,0:26:78.26:0,78,1091	1/1:2,18:15:42.14:671,42,0	0/0:18,0:17:48.16:0,48,670	1/1:5,13:14:42.14:649,42,0	1/1:3,13:12:27.09:431,27,0	1/1:3,63:57:99:2156,135,0	0/0:25,0:14:32.86:0,33,408	0/0:16,0:11:27.09:0,27,377	0/0:29,0:25:75.25:0,75,1048	0/0:12,0:12:29.96:0,30,344	1/1:1,19:19:54.16:839,54,0	1/1:1,24:22:63.21:1005,63,0	1/1:1,10:10:27.09:431,27,0
chr10	86509475	.	TA	T	636.65	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=6.255;DP=576;FS=3.399;HRun=10;HaplotypeScore=56.7215;InbreedingCoeff=0.5697;MQ=63.19;MQ0=14;MQRankSum=0.312;QD=11.79;ReadPosRankSum=1.441;VQSLOD=3.0762;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,30:34:83.98:729,84,0	0/0:8,0:8:18.05:0,18,199	0/1:20,0:8:9.89:10,0,74	0/0:16,1:8:10.85:0,11,89	0/0:32,0:33:87:0,87,927	0/0:12,0:12:27.54:0,28,300	0/0:13,0:12:27.05:0,27,289	0/0:26,0:24:54.10:0,54,578	0/0:24,0:24:51.14:0,51,564	0/0:15,0:15:39.09:0,39,418	0/0:30,0:30:78.21:0,78,863	0/0:19,1:19:48.12:0,48,524	0/0:20,0:20:56.99:0,57,612	0/0:15,1:16:16.06:0,16,405	0/0:31,0:31:63.15:0,63,682	0/0:21,0:21:60.15:0,60,655	0/0:24,0:25:61.38:0,61,656	0/0:29,0:26:69.14:0,69,746	0/0:19,0:19:47.95:0,48,505	0/0:17,0:17:42.11:0,42,462	0/0:5,0:5:6.02:0,6,66	0/0:4,0:4:9.01:0,9,92	0/0:14,0:14:17.89:0,18,377	0/0:19,0:19:42.08:0,42,447	0/0:28,0:27:66.18:0,66,730	0/0:28,0:28:69.17:0,69,744	0/0:38,0:38:90.23:0,90,987	0/0:9,0:9:24.06:0,24,264
chr10	86510683	.	G	GT	1983.32	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=0.228;DP=516;FS=2.978;HRun=8;HaplotypeScore=82.7750;InbreedingCoeff=0.9021;MQ=68.31;MQ0=7;MQRankSum=-2.253;QD=12.09;ReadPosRankSum=-3.362;VQSLOD=2.6397;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:29:7.23:20,7,0	0/0:3,0:3:8.37:0,8,62	0/0:27,0:14:6.28:0,6,145	0/0:19,0:9:4.47:0,4,52	0/0:25,0:25:25.32:0,25,296	0/0:9,0:9:14.96:0,15,137	0/0:13,0:13:33.01:0,33,299	1/1:14,21:34:63.83:649,64,0	0/0:14,0:14:23.78:0,24,199	0/0:11,0:11:23.59:0,24,215	0/0:18,0:17:38.99:0,39,351	0/0:20,0:20:29.87:0,30,268	0/0:13,0:13:23.96:0,24,214	0/0:12,0:11:14.01:0,14,135	0/0:18,0:18:20.49:0,20,171	0/0:17,0:17:39:0,39,356	0/0:34,0:34:74.84:0,75,675	0/0:27,0:26:41.70:0,42,310	1/1:7,11:17:11.68:342,12,0	1/1:16,1:17:26.95:264,27,0	1/1:4,3:7:5.81:47,6,0	0/0:13,0:13:32.94:0,33,292	0/0:14,0:14:23.29:0,23,216	0/0:26,0:24:47.05:0,47,415	0/0:15,0:15:20.73:0,21,176	1/1:16,4:20:31.70:331,32,0	1/1:4,15:19:23.22:249,23,0	1/1:12,6:18:27.02:278,27,0
chr10	86510691	.	TG	T	814.37	PASS	AB=0.969;AC=10;AF=0.179;AN=56;BaseQRankSum=4.743;DP=483;FS=2.160;HRun=1;HaplotypeScore=66.5860;InbreedingCoeff=0.0979;MQ=61.29;MQ0=14;MQRankSum=-5.197;QD=5.58;ReadPosRankSum=-2.922;VQSLOD=-0.4404;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,23:27:36.11:456,36,0	0/1:2,1:3:20.13:25,0,20	0/0:29,0:10:17.34:0,17,167	0/0:22,0:6:5.78:0,6,47	0/0:24,0:22:10.67:0,11,288	0/0:8,0:8:5.58:0,6,70	0/0:15,0:15:23.25:0,23,188	0/1:29,0:28:39.43:178,0,39	0/0:13,0:13:12.95:0,13,258	0/1:12,0:12:0.27:0,0,80	0/0:16,0:15:27.62:0,28,212	0/0:19,0:19:16.22:0,16,274	0/1:13,0:12:12.84:13,0,162	0/0:9,0:8:2.93:0,3,117	0/0:14,0:14:2.68:0,3,199	0/0:16,0:16:40.26:0,40,363	0/0:33,0:31:37.64:0,38,231	0/0:25,0:23:30.04:0,30,275	0/1:18,0:17:41.28:41,0,58	0/1:15,0:15:21.58:85,0,22	0/1:7,0:7:0.61:17,0,1	0/0:14,0:14:20.16:0,20,271	0/0:13,0:13:23.31:0,23,218	0/0:23,0:20:49.40:0,49,416	0/0:11,3:14:6.95:0,7,172	0/1:20,0:20:5.87:141,0,6	0/0:18,0:18:10.95:0,11,58	0/0:12,0:11:13.06:0,13,69
chr10	86510692	.	GT	G	597.73	PASS	AB=0.854;AC=13;AF=0.232;AN=56;BaseQRankSum=3.202;DP=487;FS=8.595;HRun=15;HaplotypeScore=68.8332;InbreedingCoeff=0.5614;MQ=59.73;MQ0=18;MQRankSum=2.542;QD=4.63;ReadPosRankSum=3.542;VQSLOD=1.3687;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:27:31.55:147,32,0	1/1:3,1:4:5.82:37,6,0	0/0:28,0:10:8.72:0,9,70	0/0:21,0:5:0:0,0,0	0/0:22,1:23:11.83:0,12,228	0/1:6,2:8:39.71:40,0,57	0/1:12,2:15:42.96:43,0,50	0/0:30,0:29:39.79:0,40,286	0/0:11,1:13:12.60:0,13,211	1/1:6,6:12:8.69:87,9,0	1/1:10,6:14:6.78:85,7,0	0/0:19,0:19:28.75:0,29,243	0/1:12,1:12:6.80:7,0,67	0/0:9,0:8:9.86:0,10,76	0/0:14,0:14:28.29:0,28,192	0/0:15,2:16:13.72:0,14,242	1/1:9,22:30:41.58:319,42,0	0/0:16,0:24:35.40:0,35,179	0/0:17,0:17:34.63:0,35,245	0/0:15,0:15:11.26:0,11,90	0/0:6,0:7:8.89:0,9,61	0/0:14,0:14:12.63:0,13,222	0/0:12,1:13:7.36:0,7,168	0/0:22,0:20:38.84:0,39,330	0/0:13,0:13:14.69:0,15,114	0/0:20,0:20:5.77:0,6,140	0/0:18,0:18:22.55:0,23,169	0/0:12,0:11:29.94:0,30,254
chr10	86511272	.	T	TA	2898.94	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-10.781;DP=710;FS=8.776;HRun=7;HaplotypeScore=65.8803;InbreedingCoeff=0.9143;MQ=73.12;MQ0=0;MQRankSum=-1.581;QD=28.70;ReadPosRankSum=2.388;VQSLOD=4.1937;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,105,1002	1/1:3,9:12:1.12:296,1,0	0/0:24,0:24:53.63:0,54,544	0/0:9,0:9:8.13:0,8,84	0/0:27,0:27:66.10:0,66,637	0/0:31,0:31:84.03:0,84,786	0/0:23,0:23:60.06:0,60,567	0/0:30,0:30:81.12:0,81,777	0/0:29,0:29:78.09:0,78,739	1/1:3,29:32:87.27:1049,87,0	1/1:4,18:22:54.08:631,54,0	0/0:27,0:27:69.08:0,69,660	0/0:20,0:20:57.03:0,57,535	0/0:20,0:20:48.05:0,48,456	0/0:32,0:32:93.13:0,93,892	0/0:30,0:30:84.13:0,84,811	1/1:3,32:35:90.24:1072,90,0	0/0:26,0:26:78.13:0,78,753	0/0:29,0:29:84.11:0,84,803	0/0:31,0:31:81.11:0,81,774	0/0:17,0:17:39.04:0,39,371	0/0:20,0:20:57.08:0,57,546	0/0:35,0:35:93.07:0,93,871	0/0:19,0:19:42.06:0,42,406	0/0:25,0:25:63.10:0,63,608	0/0:26,0:26:72.07:0,72,678	0/0:26,0:26:66.09:0,66,637	0/0:14,0:14:42.07:0,42,405
chr10	86515277	.	CT	C	500.43	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=0.402;DP=331;FS=8.058;HRun=3;HaplotypeScore=51.1609;InbreedingCoeff=0.8514;MQ=89.87;MQ0=0;MQRankSum=0.399;QD=6.76;ReadPosRankSum=2.361;VQSLOD=0.1907;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:17:0,17,125	0/0:3,0:3:5.72:0,6,29	0/0:27,0:23:32.36:0,32,363	0/0:16,0:17:11.98:0,12,200	0/0:11,0:11:26.50:0,26,217	0/0:16,0:16:30.02:0,30,283	0/0:13,0:13:30.87:0,31,260	1/1:6,2:8:14.95:120,15,0	0/0:13,0:13:27.41:0,27,222	0/0:11,0:11:23.97:0,24,209	0/0:16,0:16:37.83:0,38,298	0/0:14,0:14:32.19:0,32,266	0/0:6,0:6:2.67:0,3,72	0/0:12,0:12:27.09:0,27,236	0/0:7,0:7:13.25:0,13,109	0/0:19,0:19:35.20:0,35,291	0/0:14,0:14:34.61:0,35,225	0/0:12,0:12:17.47:0,17,107	1/1:8,0:8:11.92:96,12,0	1/1:10,1:11:5.98:48,6,0	1/1:13,2:15:20.93:187,21,0	0/0:5,0:5:11.95:0,12,108	0/0:9,0:9:17.93:0,18,149	0/0:14,0:14:27.95:0,28,291	0/0:9,0:9:24.01:0,24,215	1/1:1,9:10:8.98:73,9,0	1/1:10,0:10:17.92:136,18,0	1/1:12,0:12:2.96:20,3,0
chr10	86516313	.	G	GA	411.48	PASS	AB=0.936;AC=6;AF=0.107;AN=56;BaseQRankSum=-3.174;DP=347;FS=2.923;HRun=12;HaplotypeScore=46.0011;InbreedingCoeff=0.1661;MQ=54.43;MQ0=12;MQRankSum=0.164;QD=5.02;ReadPosRankSum=0.031;VQSLOD=0.9767;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:65.10:0,65,478	0/0:4,0:4:5.96:0,6,44	0/1:9,1:3:14.51:15,0,21	0/0:10,0:4:0.59:0,1,31	0/0:21,0:20:36.05:0,36,249	0/1:9,1:11:32.53:33,0,55	0/0:9,0:9:11.91:0,12,87	0/0:12,0:10:17.83:0,18,131	0/0:2,0:3:5.02:0,5,28	0/0:14,0:15:25.40:0,25,180	0/0:10,0:10:20.84:0,21,153	0/0:7,0:6:6.57:0,7,79	0/0:8,0:7:14.85:0,15,107	0/0:12,0:11:17.85:0,18,131	0/0:11,0:11:19.89:0,20,136	0/0:15,0:15:41.76:0,42,306	0/0:24,0:26:51.73:0,52,359	1/1:4,24:29:46.67:474,47,0	0/1:10,1:8:5.17:5,0,129	0/0:5,0:6:7.97:0,8,50	0/0:7,0:6:5.70:0,6,44	0/0:10,0:9:5.93:0,6,43	0/0:6,0:6:14.89:0,15,107	0/0:7,0:6:11.90:0,12,88	0/1:20,0:19:1.24:1,0,166	0/0:9,0:9:17.89:0,18,131	0/0:10,0:11:19.92:0,20,137	0/0:6,0:6:8.94:0,9,65
chr10	86516339	.	A	AAT	1600.04	PASS	AB=0.980;AC=15;AF=0.288;AN=52;BaseQRankSum=-5.468;DP=313;FS=5.461;HRun=0;HaplotypeScore=49.7787;InbreedingCoeff=0.6903;MQ=64.79;MQ0=2;MQRankSum=-1.901;QD=14.41;ReadPosRankSum=-0.515;VQSLOD=2.7084;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:72.09:0,72,830	1/1:2,5:7:15.05:246,15,0	0/0:13,0:6:7.98:0,8,55	0/0:13,0:9:10.96:0,11,97	0/0:15,0:15:33.09:0,33,397	0/0:12,0:12:27.07:0,27,322	0/0:9,0:9:21.04:0,21,236	0/1:16,0:13:0:0,0,0	0/0:4,0:4:12.03:0,12,138	1/1:4,8:13:24.08:373,24,0	1/1:3,5:9:15.04:215,15,0	0/0:4,0:4:9.03:0,9,111	0/0:9,0:9:24.07:0,24,286	0/0:5,0:5:12.04:0,12,149	0/0:7,0:7:15.05:0,15,186	0/1:14,1:16:7.28:7,0,405	1/1:8,25:33:44.03:872,44,0	0/0:30,0:30:58.97:0,59,759	0/1:5,0:5:0:0,0,0	1/1:5,0:5:3:25,3,0	0/0:4,0:4:2.69:0,3,12	0/0:3,0:3:6.02:0,6,74	0/0:7,0:7:15.03:0,15,167	0/0:7,0:7:18.01:0,18,205	0/0:18,0:18:45.12:0,45,544	./.	1/1:7,0:7:2.51:23,3,0	./.
chr10	86516692	.	A	AT	3656.79	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-10.122;DP=416;FS=2.570;HRun=8;HaplotypeScore=43.6345;InbreedingCoeff=0.7479;MQ=70.81;MQ0=5;MQRankSum=1.340;QD=22.03;ReadPosRankSum=-2.913;VQSLOD=2.5803;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.02:0,42,384	0/0:8,0:8:18.01:0,18,165	0/1:23,0:13:5.21:5,0,28	0/0:29,0:14:15.51:0,16,114	0/0:20,0:20:51.01:0,51,462	0/0:16,0:16:36.02:0,36,329	0/0:10,0:10:24.01:0,24,220	1/1:4,24:28:71.27:817,71,0	0/0:10,0:10:24.01:0,24,219	0/0:17,0:17:42.01:0,42,380	0/0:11,0:11:33.02:0,33,302	0/0:11,0:11:30.02:0,30,274	0/0:6,0:6:15.01:0,15,137	0/0:7,0:7:21.01:0,21,192	0/0:13,0:13:27.01:0,27,247	0/0:10,0:10:18.01:0,18,165	0/0:22,0:22:56.99:0,57,514	0/0:26,0:26:66.02:0,66,604	1/1:3,14:17:42.10:471,42,0	1/1:0,8:8:24.04:263,24,0	1/1:1,4:5:12.04:138,12,0	0/0:4,0:4:8.99:0,9,78	0/1:5,0:5:22.69:23,0,46	0/1:5,0:5:10.81:11,0,46	0/0:15,0:15:45.01:0,45,407	1/1:5,17:22:48.60:543,49,0	1/1:4,26:30:63.19:727,63,0	1/1:1,22:23:57.17:658,57,0
chr10	86517085	.	A	AT	3650.81	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-10.220;DP=500;FS=0.405;HRun=8;HaplotypeScore=47.8324;InbreedingCoeff=0.8721;MQ=63.48;MQ0=0;MQRankSum=1.594;QD=26.26;ReadPosRankSum=-2.163;VQSLOD=3.3961;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,135,1224	0/0:9,0:9:24.01:0,24,220	0/1:8,0:6:24.18:28,0,24	0/0:8,0:6:1.44:0,1,91	0/0:20,0:20:48:0,48,434	0/0:12,0:12:33.02:0,33,302	0/0:20,0:20:42.02:0,42,384	1/1:6,14:19:45.10:496,45,0	0/0:12,0:12:33.02:0,33,302	0/0:18,0:18:48.01:0,48,432	0/0:15,0:15:39.02:0,39,356	0/0:12,0:12:30.01:0,30,275	0/0:13,0:13:36.01:0,36,329	0/0:15,0:15:45.02:0,45,412	0/0:25,0:25:63.01:0,63,572	0/0:21,0:21:48.01:0,48,439	0/0:32,0:32:84.02:0,84,762	0/0:24,0:23:59.97:0,60,541	1/1:5,16:21:48.11:539,48,0	1/1:1,10:11:27.04:297,27,0	1/1:2,19:21:54.16:623,54,0	0/0:10,0:10:24.01:0,24,219	0/0:14,0:14:36.01:0,36,329	0/0:19,0:20:44.04:0,44,390	0/0:13,0:13:36.01:0,36,326	1/1:5,16:21:23.70:526,24,0	1/1:2,18:20:51.15:589,51,0	1/1:0,17:17:48.14:554,48,0
chr10	86517246	.	T	TC	4911.71	PASS	AB=0.525;AC=13;AF=0.232;AN=56;BaseQRankSum=-13.121;DP=400;FS=1.807;HRun=0;HaplotypeScore=40.6535;InbreedingCoeff=0.8430;MQ=62.90;MQ0=7;MQRankSum=-2.511;QD=35.59;ReadPosRankSum=-1.054;VQSLOD=3.9402;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:57.08:0,57,745	0/0:2,0:2:5.94:0,6,41	0/0:4,0:3:5.94:0,6,45	0/0:7,0:5:15.02:0,15,174	0/0:16,0:16:48.13:0,48,619	0/0:19,0:18:54.07:0,54,662	0/0:4,0:4:12.02:0,12,149	1/1:2,31:32:96.04:1181,96,0	0/0:5,0:5:15.01:0,15,173	0/0:15,0:15:45.15:0,45,628	0/0:24,0:24:66.20:0,66,876	0/0:12,0:12:36.10:0,36,468	0/0:10,0:9:27.08:0,27,359	0/0:6,0:6:18.03:0,18,229	0/0:14,0:14:42.11:0,42,563	0/0:14,0:14:42.13:0,42,566	0/0:33,0:33:93.24:0,93,1224	0/0:25,0:25:69.22:0,69,943	1/1:1,24:23:66.19:878,66,0	1/1:0,19:19:57.05:742,57,0	1/1:3,6:9:27.06:341,27,0	0/0:6,0:6:18.06:0,18,251	0/0:8,0:8:24.08:0,24,334	0/0:5,0:5:12.04:0,12,168	0/0:12,0:12:36.12:0,36,502	0/1:2,19:21:20.50:683,0,20	1/1:0,20:19:54.18:752,54,0	1/1:1,10:10:24.08:334,24,0
chr10	86518846	.	TA	T	1629.25	PASS	AB=0.900;AC=12;AF=0.214;AN=56;BaseQRankSum=9.251;DP=541;FS=12.699;HRun=11;HaplotypeScore=57.3525;InbreedingCoeff=0.7605;MQ=72.20;MQ0=0;MQRankSum=0.437;QD=13.14;ReadPosRankSum=2.335;VQSLOD=2.2266;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:62.93:517,63,0	1/1:0,5:5:11.99:99,12,0	0/0:12,1:9:5.84:0,6,93	0/0:20,0:18:19.43:0,19,138	0/0:21,0:21:39.10:0,39,415	0/0:20,0:20:42.10:0,42,442	0/0:15,0:15:13.82:0,14,321	0/0:33,2:35:54.09:0,54,721	0/0:19,1:20:20.45:0,20,414	1/1:0,16:16:44.93:367,45,0	1/1:3,13:16:29.92:287,30,0	0/0:23,0:23:53.96:0,54,551	0/0:17,1:18:20.42:0,20,404	0/1:8,1:9:3.61:4,0,160	0/0:26,0:26:69.15:0,69,725	0/0:18,0:18:48.08:0,48,500	1/1:3,27:31:64.96:523,65,0	0/0:19,1:20:32.46:0,32,532	0/0:23,0:23:54.11:0,54,557	0/0:13,1:14:5.43:0,5,263	0/0:20,0:21:50.93:0,51,509	0/0:16,0:16:39.07:0,39,400	0/0:17,0:17:39.08:0,39,403	0/0:31,0:31:84.20:0,84,889	0/0:13,1:14:14.46:0,14,359	0/1:16,2:18:7.21:7,0,326	0/0:21,2:22:7.87:0,8,487	0/0:8,0:8:20.99:0,21,203
chr10	86519272	.	TG	T	4568.42	PASS	AB=0.966;AC=52;AF=0.929;AN=56;BaseQRankSum=-5.812;DP=399;FS=12.743;HRun=3;HaplotypeScore=36.0884;InbreedingCoeff=-0.0890;MQ=67.67;MQ0=43;MQRankSum=1.277;QD=11.45;ReadPosRankSum=0.534;VQSLOD=1.4472;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:36:29.95:31,0,30	1/1:7,0:7:18.22:128,18,0	0/1:43,3:15:42.06:94,0,42	0/1:45,4:15:82.59:118,0,83	1/1:11,0:10:20.73:163,21,0	1/1:11,0:10:28.94:205,29,0	1/1:10,0:9:23.87:187,24,0	1/1:27,0:21:43.30:386,43,0	1/1:8,0:7:17.94:143,18,0	1/1:8,0:8:19.15:144,19,0	1/1:11,0:11:32.79:265,33,0	1/1:9,0:7:20.99:181,21,0	1/1:6,0:6:14.86:113,15,0	1/1:7,0:6:17.99:155,18,0	1/1:4,0:4:12:106,12,0	1/1:6,0:6:11.80:85,12,0	1/1:23,0:22:44.74:347,45,0	1/1:15,0:11:26.70:198,27,0	1/1:18,0:17:45.01:401,45,0	1/1:11,0:10:20.89:162,21,0	1/1:9,0:8:17.91:139,18,0	1/1:3,0:2:3:27,3,0	1/1:6,0:5:8.92:66,9,0	0/1:5,0:5:7.49:31,0,7	1/1:12,0:9:14.82:128,15,0	1/1:14,0:12:35.45:290,35,0	1/1:15,0:11:23.90:191,24,0	1/1:10,0:5:13.63:83,14,0
chr10	86519765	.	G	GTGGACAAGTA	34710	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-6.855;DP=631;FS=2.161;HRun=0;HaplotypeScore=168.1074;InbreedingCoeff=0.9966;MQ=82.33;MQ0=3;MQRankSum=-18.622;QD=113.80;ReadPosRankSum=-1.849;VQSLOD=4.8051;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,19:41:87.13:4139,87,0	1/1:3,7:13:32.78:1506,33,0	0/0:31,0:31:84.08:0,84,2495	0/0:22,0:22:63.17:0,63,1706	0/0:26,0:26:66.16:0,66,1998	0/0:24,0:24:69.24:0,69,2219	0/0:27,0:27:78.23:0,78,2357	1/1:25,9:35:96.33:4449,96,0	0/0:33,0:33:99:0,99,3123	1/1:8,10:22:63.18:2622,63,0	1/1:3,15:18:48.16:2235,48,0	0/0:24,0:24:72.23:0,72,2280	0/0:7,0:7:21.07:0,21,642	0/0:19,0:19:42.14:0,42,1384	0/0:17,0:17:48.16:0,48,1582	0/0:25,0:25:69.24:0,69,2175	1/1:4,16:22:48.16:2453,48,0	1/1:2,9:14:36.12:1873,36,0	1/1:10,9:20:60.18:2738,60,0	1/1:9,13:25:63.21:2750,63,0	1/1:19,11:31:51.15:2138,51,0	0/0:17,0:17:45.15:0,45,1404	0/0:9,0:9:21.07:0,21,689	0/0:27,0:27:81.28:0,81,2543	0/0:18,0:18:54.19:0,54,1780	1/1:8,25:35:99:4620,99,0	1/1:7,9:16:48.16:2394,48,0	1/1:1,4:10:15.05:792,15,0
chr10	86521735	.	TA	T	532.68	PASS	AB=0.821;AC=11;AF=0.196;AN=56;BaseQRankSum=3.709;DP=509;FS=9.782;HRun=15;HaplotypeScore=61.1905;InbreedingCoeff=0.3719;MQ=71.62;MQ0=1;MQRankSum=-0.097;QD=3.37;ReadPosRankSum=3.850;VQSLOD=-0.6599;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:27:28.09:0,28,304	1/1:2,3:5:8.86:58,9,0	0/1:10,1:9:7.92:8,0,44	0/0:12,0:11:6.35:0,6,42	0/0:16,1:21:12.44:0,12,225	0/0:16,0:17:29.68:0,30,239	0/0:13,2:15:17.97:0,18,151	0/0:26,0:26:43.18:0,43,354	0/0:16,0:19:41.66:0,42,341	1/1:8,9:17:23.50:154,24,0	0/1:6,10:17:21.49:109,0,21	0/1:23,2:25:7.68:8,0,171	0/0:21,1:22:31.67:0,32,374	0/0:12,0:12:22.38:0,22,173	0/0:16,0:21:20:0,20,191	0/0:22,1:25:17.74:0,18,309	1/1:10,24:36:7.42:286,7,0	0/0:7,0:14:8.52:0,9,43	0/1:23,3:29:16.03:16,0,310	0/0:17,0:19:24.55:0,25,183	0/0:7,0:7:8.97:0,9,71	0/0:8,0:8:11.97:0,12,99	0/0:14,0:14:28.39:0,28,221	0/1:11,4:18:49.70:50,0,153	0/0:12,0:12:29.96:0,30,254	0/0:15,0:18:23.72:0,24,183	0/0:24,0:29:47.04:0,47,371	0/0:9,0:12:20.66:0,21,154
chr10	86522110	.	CT	C	3582.11	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=8.804;DP=516;FS=6.611;HRun=8;HaplotypeScore=50.2588;InbreedingCoeff=0.8367;MQ=57.40;MQ0=10;MQRankSum=-0.907;QD=18.75;ReadPosRankSum=3.386;VQSLOD=3.3232;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,46:50:99:1158,120,0	0/0:7,0:7:15.05:0,15,181	0/0:15,0:4:1.60:0,2,23	0/1:11,0:3:15.50:16,0,23	0/0:27,0:27:72.06:0,72,821	0/0:26,0:26:72.22:0,72,870	0/0:13,0:12:30.06:0,30,347	1/1:13,23:34:68.90:658,69,0	0/0:3,0:3:9.03:0,9,109	0/0:26,0:26:75.12:0,75,850	0/0:23,0:22:60.18:0,60,714	0/0:13,0:13:35.97:0,36,404	0/0:14,0:14:33.10:0,33,399	0/0:19,0:18:54.17:0,54,652	0/0:12,0:12:30.08:0,30,351	0/0:28,0:28:81.25:0,81,978	0/0:24,0:24:45.13:0,45,532	0/0:26,0:26:71.81:0,72,811	1/1:7,13:17:33.04:319,33,0	1/1:1,17:18:42.06:406,42,0	1/1:0,4:4:12.02:116,12,0	0/0:6,0:6:18.06:0,18,217	0/0:17,0:17:45.12:0,45,521	0/0:16,0:16:45.13:0,45,531	0/0:10,0:10:27.08:0,27,326	1/1:9,12:20:2.79:304,3,0	1/1:3,15:18:30.05:290,30,0	1/1:3,10:12:33.05:316,33,0
chr10	86522632	.	TA	T	2509.48	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.899;DP=648;FS=3.146;HRun=12;HaplotypeScore=80.5396;InbreedingCoeff=0.9122;MQ=70.00;MQ0=0;MQRankSum=-0.076;QD=15.59;ReadPosRankSum=-0.779;VQSLOD=4.2649;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,3:52:65.60:0,66,1036	0/0:11,0:11:33.03:0,33,324	0/0:19,0:16:14.97:0,15,275	0/0:16,0:11:6.73:0,7,128	0/0:28,1:29:36.84:0,37,540	0/0:18,0:18:7.75:0,8,359	0/0:13,1:15:0.96:0,1,268	1/1:11,14:25:35.98:340,36,0	0/0:24,0:24:48.10:0,48,487	0/0:36,0:36:54.65:0,55,665	0/0:10,0:11:23.85:0,24,218	0/0:24,1:25:30.91:0,31,489	0/0:21,0:21:51.06:0,51,506	0/0:15,1:16:9.82:0,10,276	0/0:28,0:29:64.33:0,64,619	0/0:17,0:17:45.09:0,45,456	0/0:25,1:26:42.90:0,43,616	0/0:27,1:28:45.82:0,46,617	1/1:1,17:19:52.81:398,53,0	1/1:4,16:21:52.33:397,52,0	1/1:5,33:38:80.67:625,81,0	0/0:22,1:23:27.86:0,28,464	0/0:14,0:14:27.03:0,27,262	0/0:35,0:35:75.08:0,75,743	0/0:20,0:21:47.91:0,48,459	1/1:8,21:32:12.21:433,12,0	1/1:2,14:16:38.85:302,39,0	1/1:1,9:10:26.89:209,27,0
chr10	86525728	.	TAG	T	2439.10	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=6.448;DP=289;FS=8.138;HRun=0;HaplotypeScore=38.6129;InbreedingCoeff=0.8982;MQ=61.66;MQ0=2;MQRankSum=-0.483;QD=32.96;ReadPosRankSum=-1.630;VQSLOD=4.4003;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.20:0,63,1146	0/0:4,0:4:6.02:0,6,112	0/0:9,0:5:12.04:0,12,217	0/0:6,0:4:9.03:0,9,146	0/0:8,0:8:12.04:0,12,225	0/0:8,0:7:21.07:0,21,393	0/0:24,0:24:60.21:0,60,1123	1/1:3,14:16:39.13:569,39,0	0/0:7,0:7:17.74:0,18,330	0/0:9,0:9:24.08:0,24,447	0/0:5,0:5:12.04:0,12,225	0/0:7,0:7:21.07:0,21,393	0/0:8,0:8:24.04:0,24,412	0/0:7,0:7:18.06:0,18,336	0/0:9,0:9:24.08:0,24,448	0/0:4,0:4:9.03:0,9,168	0/0:25,0:25:66.23:0,66,1225	0/0:10,0:10:27.09:0,27,505	1/1:0,11:11:33.10:470,33,0	1/1:0,7:7:18.06:265,18,0	1/1:0,20:20:48.16:707,48,0	0/0:9,0:9:21.07:0,21,393	0/0:9,0:9:18.06:0,18,337	0/0:19,0:18:48.15:0,48,856	0/0:5,0:5:15.05:0,15,280	1/1:2,7:9:21.07:309,21,0	1/1:2,7:9:18.06:265,18,0	1/1:0,1:1:3.01:44,3,0
chr10	86526169	.	CT	C	1339.72	PASS	AB=0.870;AC=19;AF=0.339;AN=56;BaseQRankSum=5.819;DP=509;FS=3.995;HRun=13;HaplotypeScore=75.9227;InbreedingCoeff=0.4359;MQ=68.19;MQ0=0;MQRankSum=-2.273;QD=5.82;ReadPosRankSum=0.132;VQSLOD=2.4926;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:31:48.25:0,48,321	0/0:5,0:12:20.21:0,20,129	0/0:16,0:12:19.38:0,19,154	0/1:14,0:11:1.48:1,0,126	0/1:17,2:19:0.86:1,0,154	0/0:12,0:12:24.04:0,24,231	0/0:22,4:27:7.11:0,7,361	1/1:7,16:25:34.32:325,34,0	0/1:15,3:18:35.65:36,0,160	0/0:7,0:14:25.89:0,26,158	0/0:10,0:15:4.73:0,5,145	0/0:29,1:31:20.09:0,20,487	0/1:15,0:16:8.21:8,0,96	0/0:11,0:11:15:0,15,135	0/1:23,3:29:13.54:14,0,392	0/0:17,3:21:4.08:0,4,339	0/0:5,0:20:34.91:0,35,227	0/0:20,1:24:13.97:0,14,277	1/1:8,3:12:16.88:112,17,0	1/1:5,4:9:17.80:127,18,0	1/1:8,10:19:2.74:174,3,0	0/1:11,2:13:16.71:17,0,177	0/0:14,0:15:32.01:0,32,335	0/0:21,0:21:42.01:0,42,382	0/0:9,0:9:18.01:0,18,166	1/1:8,13:22:43.73:309,44,0	1/1:6,15:22:20.44:302,20,0	0/1:6,4:12:7.27:97,0,7
chr10	86526226	.	CA	C	3480.10	PASS	AB=0.938;AC=15;AF=0.268;AN=56;BaseQRankSum=8.666;DP=397;FS=35.933;HRun=1;HaplotypeScore=43.7567;InbreedingCoeff=0.9075;MQ=86.78;MQ0=0;MQRankSum=-3.164;QD=32.83;ReadPosRankSum=-1.140;VQSLOD=1.0893;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:57.19:0,57,909	0/0:9,0:9:27.09:0,27,431	0/0:13,0:13:37.13:0,37,492	0/1:14,1:15:11.55:12,0,459	0/0:7,0:7:21.07:0,21,335	0/0:17,0:17:51.17:0,51,797	0/0:17,0:17:51.17:0,51,793	1/1:0,11:11:33.10:445,33,0	0/0:18,0:18:51.17:0,51,804	0/0:11,0:11:33.11:0,33,518	0/0:12,0:12:36.12:0,36,576	0/0:19,0:19:57.19:0,57,905	0/0:5,0:5:15.05:0,15,239	0/0:10,0:10:30.10:0,30,479	0/0:20,0:20:57.18:0,57,877	0/0:19,0:19:57.19:0,57,911	0/0:12,0:12:33.11:0,33,520	0/0:29,0:29:81.23:0,81,1259	1/1:0,18:17:51.17:711,51,0	1/1:0,10:10:24.08:334,24,0	1/1:0,17:17:42.14:582,42,0	0/0:13,0:13:39.12:0,39,600	0/0:10,0:10:30.09:0,30,455	0/0:17,0:17:51.17:0,51,813	0/0:10,0:10:30.10:0,30,480	1/1:1,14:15:42.14:580,42,0	1/1:1,14:15:45.13:608,45,0	1/1:0,5:5:15.05:210,15,0
chr10	86526449	.	G	GA	407.36	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.987;DP=427;FS=3.364;HRun=10;HaplotypeScore=55.2668;InbreedingCoeff=0.5794;MQ=76.45;MQ0=12;MQRankSum=1.198;QD=16.97;ReadPosRankSum=-0.862;VQSLOD=3.7564;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:24:29.41:501,29,0	0/0:5,0:5:8.99:0,9,74	0/0:43,0:25:26.24:0,26,218	0/0:18,0:9:2.35:0,2,72	0/0:22,0:22:55.47:0,55,447	0/0:9,0:9:26.91:0,27,216	0/0:6,0:6:17.97:0,18,146	0/0:19,0:18:44.90:0,45,367	0/0:12,0:14:34.04:0,34,258	0/0:14,1:15:12.95:0,13,310	0/0:12,0:13:28.79:0,29,215	0/0:13,0:13:29.83:0,30,236	0/0:6,0:6:17.98:0,18,148	0/0:5,0:5:14.44:0,14,102	0/0:16,0:17:42.77:0,43,327	0/0:14,0:14:41.94:0,42,343	0/0:24,0:24:62.81:0,63,509	0/0:11,0:12:31.91:0,32,244	0/0:17,0:16:35.95:0,36,294	0/0:16,0:17:34.93:0,35,270	0/0:6,0:6:14.97:0,15,123	0/0:2,0:2:3:0,3,25	0/0:14,0:14:19.50:0,19,190	0/0:1,0:1:3:0,3,25	0/0:10,0:10:29.96:0,30,246	0/0:18,0:18:47.93:0,48,394	0/0:14,0:14:35.84:0,36,288	0/0:49,0:47:99:0,126,1023
chr10	86528181	.	GAATT	G	1199.72	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.562;DP=672;FS=0.760;HRun=0;HaplotypeScore=109.5851;InbreedingCoeff=0.9909;MQ=63.77;MQ0=0;MQRankSum=-2.021;QD=29.99;ReadPosRankSum=1.069;VQSLOD=3.4266;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:39:75.04:1295,75,0	0/0:10,0:10:27.09:0,27,750	0/0:12,0:12:36.10:0,36,766	0/0:7,0:7:18.06:0,18,459	0/0:24,0:24:72.22:0,72,1887	0/0:18,0:18:51.18:0,51,1426	0/0:19,0:19:47.66:0,48,1156	0/0:35,0:35:99:0,105,2826	0/0:30,0:30:84.20:0,84,2141	0/0:41,0:41:99:0,120,3062	0/0:27,0:27:81.21:0,81,2079	0/0:15,0:15:45.14:0,45,1199	0/0:23,0:23:66.23:0,66,1747	0/0:25,0:25:63.17:0,63,1584	0/0:19,0:19:57.18:0,57,1526	0/0:27,0:27:81.24:0,81,2091	0/0:35,0:35:99:0,105,2611	0/0:25,0:25:72.18:0,72,1883	0/0:21,0:21:63.19:0,63,1520	0/0:25,0:25:75.22:0,75,1904	0/0:28,0:28:81.24:0,81,2056	0/0:21,0:21:63.19:0,63,1582	0/0:22,0:22:66.21:0,66,1785	0/0:16,0:16:45.09:0,45,1101	0/0:17,0:17:48.16:0,48,1341	0/0:38,0:38:99:0,114,3054	0/0:33,0:33:99:0,99,2493	0/0:19,0:19:57.20:0,57,1588
chr10	86528337	.	GC	G	2495.21	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=10.423;DP=665;FS=0.970;HRun=2;HaplotypeScore=63.5430;InbreedingCoeff=0.8518;MQ=61.76;MQ0=4;MQRankSum=0.198;QD=28.35;ReadPosRankSum=2.302;VQSLOD=3.4062;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:47:99:0,105,1574	1/1:0,12:12:33.11:428,33,0	0/1:10,0:9:10.46:10,0,282	0/0:16,0:15:45.08:0,45,620	0/0:21,0:21:51.01:0,51,764	0/0:24,0:22:60.19:0,60,879	0/0:14,0:14:36.12:0,36,538	0/0:43,0:42:99:0,123,1819	0/0:26,0:26:69.23:0,69,1034	1/1:0,24:24:72.23:935,72,0	1/1:0,14:14:36.12:467,36,0	0/0:24,0:24:63.21:0,63,944	0/0:21,0:21:57.19:0,57,854	0/0:26,0:26:60.20:0,60,899	0/0:35,0:33:84.27:0,84,1238	0/0:24,0:23:57.18:0,57,836	1/1:2,26:27:63.20:818,63,0	0/0:24,0:22:42.06:0,42,579	0/0:27,0:25:72.24:0,72,1079	0/0:27,0:27:75.24:0,75,1104	0/0:25,0:25:66.22:0,66,988	0/0:22,0:22:53.98:0,54,788	0/0:19,0:18:45.15:0,45,675	0/0:24,0:22:57.19:0,57,854	0/0:23,0:23:57.17:0,57,813	0/0:30,2:30:9.41:0,9,1117	0/0:23,0:23:60.18:0,60,899	0/0:7,0:5:9.03:0,9,135
chr10	86529214	.	T	TA	2867.43	PASS	AB=0.748;AC=24;AF=0.429;AN=56;BaseQRankSum=-2.683;DP=313;FS=7.275;HRun=10;HaplotypeScore=40.9694;InbreedingCoeff=0.7453;MQ=75.07;MQ0=1;MQRankSum=-0.816;QD=16.20;ReadPosRankSum=-1.223;VQSLOD=3.0526;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:33:336,33,0	1/1:1,0:4:8.52:43,9,0	0/0:11,0:9:14.30:0,14,98	0/1:13,1:10:11.06:26,0,11	0/0:16,1:17:12.95:0,13,313	0/0:28,0:29:70.94:0,71,572	0/0:3,0:3:8.99:0,9,74	1/1:8,27:33:75.17:787,75,0	0/0:5,0:5:11.99:0,12,98	1/1:5,0:16:31.25:157,31,0	1/1:6,0:8:11.48:68,11,0	0/0:7,0:6:14.97:0,15,120	0/0:2,0:2:2.96:0,3,25	0/0:4,0:5:14.02:0,14,102	0/0:9,0:8:20.96:0,21,169	0/0:4,0:4:8.99:0,9,74	1/1:8,0:20:45.71:243,46,0	0/0:22,0:23:46.03:0,46,357	1/1:4,11:15:33.06:343,33,0	0/1:2,7:9:0.62:182,0,1	1/1:1,4:5:9.02:96,9,0	0/0:1,0:1:3:0,3,25	0/0:4,0:4:11.99:0,12,99	0/0:4,0:4:8.98:0,9,71	0/0:12,0:12:32.96:0,33,271	1/1:4,17:21:7.83:485,8,0	1/1:2,9:11:27.07:288,27,0	1/1:1,0:1:2.96:19,3,0
chr10	86529296	.	ACC	A	1488.82	PASS	AB=1.000;AC=10;AF=0.185;AN=54;BaseQRankSum=4.448;DP=406;FS=1.218;HRun=2;HaplotypeScore=75.0029;InbreedingCoeff=0.7199;MQ=45.97;MQ0=22;MQRankSum=-4.796;QD=18.16;ReadPosRankSum=-1.572;VQSLOD=0.7038;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:5:21.86:111,0,22	1/1:1,4:4:12.04:151,12,0	./.	0/0:20,0:4:1.95:0,2,6	0/0:23,0:23:23.48:0,23,692	0/0:20,0:19:50.59:0,51,622	0/0:16,0:12:29.30:0,29,371	0/0:24,0:16:28.52:0,29,338	0/0:7,0:7:9.03:0,9,112	1/1:6,6:12:33.03:379,33,0	1/1:15,3:17:42.19:436,42,0	0/0:10,0:9:26.06:0,26,306	0/0:5,0:5:9.14:0,9,137	0/0:10,0:10:19.41:0,19,334	0/0:11,0:10:18.05:0,18,230	0/0:13,0:13:14.79:0,15,361	1/1:14,9:20:50.97:568,51,0	0/0:24,0:24:51.03:0,51,666	0/0:23,0:15:45.07:0,45,497	0/0:13,0:12:28.29:0,28,355	0/0:9,0:8:24.07:0,24,306	0/0:6,0:6:17.92:0,18,216	0/0:9,0:9:26.79:0,27,312	0/0:15,0:13:26.64:0,27,294	0/1:16,0:16:3.06:3,0,280	0/0:22,0:20:22.86:0,23,568	0/0:16,0:15:38.88:0,39,455	0/0:14,0:13:24.04:0,24,280
chr10	86529298	.	CA	C	727.20	PASS	AB=0.701;AC=14;AF=0.250;AN=56;BaseQRankSum=-2.720;DP=422;FS=0.557;HRun=16;HaplotypeScore=80.9429;InbreedingCoeff=0.4475;MQ=45.96;MQ0=21;MQRankSum=0.546;QD=4.72;ReadPosRankSum=-0.264;VQSLOD=1.7242;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,1:8:4.18:0,4,12	1/1:6,0:4:3.62:14,4,0	0/0:13,0:1:3:0,3,25	0/0:18,0:4:2.40:0,2,9	0/0:10,0:23:42.70:0,43,253	0/0:15,1:19:20.49:0,20,180	0/0:14,0:13:28.22:0,28,176	0/1:14,9:18:59.79:101,0,60	0/0:1,0:7:8.68:0,9,53	0/0:15,0:14:11.24:0,11,57	0/0:21,0:20:22.42:0,22,130	0/0:6,0:9:20.36:0,20,126	0/0:6,0:6:12.82:0,13,71	0/0:8,0:10:17.20:0,17,93	0/0:6,0:13:20.46:0,20,132	0/0:10,0:12:24.33:0,24,115	0/0:26,0:22:13.13:0,13,75	0/1:15,8:24:9.33:9,0,233	1/1:15,8:17:34.76:194,35,0	1/1:6,4:12:0.13:85,0,0	0/1:6,3:8:27.08:75,0,27	0/0:4,0:6:17.53:0,18,111	0/0:5,0:8:7.20:0,7,54	0/0:13,0:13:19.81:0,20,99	0/0:12,0:15:17.70:0,18,121	1/1:16,6:21:15.63:178,16,0	1/1:8,6:15:13.04:168,13,0	0/1:5,8:13:6.02:66,0,6
chr10	86529321	.	A	AAC	244.14	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=4.765;DP=447;FS=15.575;HRun=0;HaplotypeScore=94.2163;InbreedingCoeff=0.3642;MQ=50.99;MQ0=16;MQRankSum=-3.389;QD=3.30;ReadPosRankSum=1.543;VQSLOD=0.8784;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,6:11:1.46:157,1,0	0/1:6,0:4:0.40:0,0,15	0/0:22,0:5:12.38:0,12,152	0/0:26,0:7:15.03:0,15,190	0/0:17,0:16:40.90:0,41,490	0/0:17,0:17:44.40:0,44,568	0/0:16,0:12:30.05:0,30,411	0/0:37,0:36:93.27:0,93,1378	0/0:8,0:8:12.04:0,12,183	1/1:10,0:9:3.77:66,4,0	0/1:21,0:21:28:28,0,78	0/0:9,0:8:24.07:0,24,339	0/0:8,0:7:19.74:0,20,185	0/0:9,0:9:23.93:0,24,288	0/0:15,0:15:33.11:0,33,491	0/0:16,0:16:44.30:0,44,573	0/1:24,0:20:59.98:106,0,60	0/0:22,0:22:45.10:0,45,614	0/0:22,0:20:57.07:0,57,813	0/0:13,0:13:33.03:0,33,478	0/0:11,0:11:33.05:0,33,450	0/0:8,0:8:24.03:0,24,323	0/0:7,0:7:18.02:0,18,229	0/0:16,0:14:35.62:0,36,406	0/0:17,0:17:34.08:0,34,476	0/0:24,0:22:63.09:0,63,851	0/0:19,0:18:54.17:0,54,788	0/0:14,0:14:20.70:0,21,339
chr10	86529979	.	TGA	T	4910.37	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.319;DP=735;FS=4.469;HRun=0;HaplotypeScore=87.7468;InbreedingCoeff=0.9758;MQ=81.71;MQ0=0;MQRankSum=-2.203;QD=38.97;ReadPosRankSum=1.969;VQSLOD=7.0945;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,48:48:99:1899,129,0	1/1:1,12:13:33.10:484,33,0	0/0:14,0:14:42.14:0,42,763	0/0:29,0:29:81.23:0,81,1380	0/0:29,0:29:81.28:0,81,1515	0/0:17,0:17:48.15:0,48,867	0/0:33,0:33:99:0,99,1793	0/0:35,0:35:99:0,99,1825	0/0:39,0:39:99:0,111,2046	1/1:2,21:23:63.18:893,63,0	1/1:1,12:13:33.11:486,33,0	0/0:24,0:24:69.24:0,69,1292	0/0:23,0:23:60.21:0,60,1122	0/0:29,0:29:87.30:0,87,1612	0/0:30,0:30:90.27:0,90,1583	0/0:27,0:27:81.28:0,81,1517	1/1:1,28:29:78.26:1148,78,0	0/0:10,0:10:30.06:0,30,526	0/0:20,0:20:60.21:0,60,1114	0/0:23,0:23:66.21:0,66,1180	0/0:69,0:69:99:0,193,3560	0/0:24,0:24:72.21:0,72,1284	0/0:18,0:18:51.15:0,51,884	0/0:32,0:32:93.32:0,93,1742	0/0:20,0:20:54.19:0,54,1012	0/0:34,1:35:61.17:0,61,1845	0/0:27,0:27:81.28:0,81,1516	0/0:2,0:2:6.02:0,6,112
chr10	86530361	.	CT	C	7343.72	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.562;DP=731;FS=6.473;HRun=1;HaplotypeScore=70.6606;InbreedingCoeff=0.9970;MQ=84.89;MQ0=0;MQRankSum=-0.655;QD=37.85;ReadPosRankSum=-1.001;VQSLOD=4.8641;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,2198	0/0:5,0:5:15.05:0,15,240	0/0:25,0:26:64.11:0,64,996	0/0:21,0:21:60.17:0,60,904	0/0:24,0:24:72.23:0,72,1112	0/0:21,0:21:63.21:0,63,1000	0/0:27,0:27:81.26:0,81,1271	1/1:0,41:41:99:1414,105,0	0/0:25,0:25:75.26:0,75,1191	0/0:28,0:28:81.27:0,81,1262	0/0:14,0:14:39.13:0,39,624	0/0:21,0:21:60.20:0,60,957	0/0:17,0:17:51.15:0,51,757	0/0:27,0:27:78.25:0,78,1221	0/0:37,0:37:99:0,111,1773	0/0:44,0:44:99:0,132,2093	0/0:40,0:40:99:0,120,1893	0/0:23,0:23:69.24:0,69,1103	1/1:0,19:19:54.18:746,54,0	1/1:0,23:23:60.20:825,60,0	1/1:0,47:47:99:1887,135,0	0/0:24,0:24:72.25:0,72,1149	0/0:22,0:22:66.19:0,66,1007	0/0:29,0:29:87.25:0,87,1363	0/0:16,0:16:48.15:0,48,743	1/1:2,24:26:30.24:964,30,0	1/1:0,23:23:62.87:880,63,0	1/1:0,15:15:45.15:629,45,0
chr10	86530719	.	TG	T	8826.73	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=14.958;DP=679;FS=11.232;HRun=5;HaplotypeScore=65.7662;InbreedingCoeff=0.9917;MQ=82.25;MQ0=0;MQRankSum=-2.922;QD=31.41;ReadPosRankSum=1.635;VQSLOD=4.9582;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,41:43:99:1259,111,0	1/1:0,3:3:9.03:102,9,0	0/0:23,0:23:57.13:0,57,738	0/0:20,0:20:31.33:0,31,707	0/0:27,0:27:75.24:0,75,1011	0/0:13,0:13:39.13:0,39,532	0/0:25,0:25:72.23:0,72,967	1/1:4,12:16:36.10:408,36,0	0/0:30,0:30:90.29:0,90,1217	1/1:1,25:26:78.22:883,78,0	1/1:1,15:16:42.12:476,42,0	0/0:23,0:23:66.21:0,66,889	0/0:26,0:26:72.23:0,72,968	0/0:27,0:27:81.27:0,81,1102	0/0:29,0:29:84.27:0,84,1135	0/0:30,0:30:90.25:0,90,1182	1/1:0,29:29:84.24:953,84,0	0/0:26,0:26:78.25:0,78,1051	1/1:0,19:19:57.13:628,57,0	1/1:0,20:20:54.15:613,54,0	1/1:1,29:30:87.25:987,87,0	0/0:21,0:21:57.18:0,57,763	0/0:25,0:25:69.23:0,69,942	0/0:31,0:31:87.28:0,87,1174	0/0:22,0:22:63.19:0,63,831	1/1:2,33:35:99:1123,99,0	1/1:1,33:34:93.27:1055,93,0	1/1:0,10:10:30.09:340,30,0
chr10	86532877	.	A	AAAAAGAACC	4923.76	PASS	AB=0.924;AC=20;AF=0.385;AN=52;BaseQRankSum=-1.409;DP=454;FS=12.665;HRun=0;HaplotypeScore=148.3885;InbreedingCoeff=0.5822;MQ=36.04;MQ0=37;MQRankSum=-1.596;QD=25.51;ReadPosRankSum=5.062;VQSLOD=3.6359;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:20:70.74:241,0,71	1/1:7,0:6:5.95:95,6,0	./.	./.	0/0:31,0:27:35.65:0,36,386	0/0:12,0:11:20.82:0,21,261	0/0:20,0:18:32.82:0,33,442	0/1:27,0:17:85.13:529,0,85	0/0:22,0:18:39.03:0,39,545	1/1:8,0:8:5.58:241,6,0	1/1:8,0:8:5.82:95,6,0	0/0:13,0:11:13.57:0,14,185	0/0:15,0:13:32.98:0,33,449	0/0:8,0:6:11.01:0,11,135	0/0:19,0:19:34.55:0,35,448	0/0:19,0:17:41.71:0,42,612	1/1:19,0:17:23.25:551,23,0	0/0:38,0:33:56.02:0,56,877	1/1:14,0:12:36.12:772,36,0	1/1:10,0:10:10.81:294,11,0	1/1:6,0:4:6.01:60,6,0	0/0:12,0:12:20.54:0,21,272	0/0:9,0:9:15.36:0,15,127	0/0:30,0:26:29.41:0,29,488	0/0:13,0:12:24.01:0,24,222	0/1:9,4:16:70.28:512,0,70	0/1:20,0:18:20.34:558,0,20	1/1:26,0:25:44.15:976,44,0
chr10	86532878	.	A	AAAAGAACC	4698.67	PASS	AB=0.954;AC=19;AF=0.365;AN=52;BaseQRankSum=-0.810;DP=439;FS=10.965;HRun=0;HaplotypeScore=139.7139;InbreedingCoeff=0.5315;MQ=35.23;MQ0=37;MQRankSum=-3.722;QD=24.73;ReadPosRankSum=5.435;VQSLOD=3.4960;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:19:99:200,0,101	1/1:7,0:6:5.95:95,6,0	./.	./.	0/0:30,0:26:41.83:0,42,469	0/0:12,0:11:25.19:0,25,314	0/0:18,0:16:34.06:0,34,467	0/1:19,4:17:99:528,0,100	0/0:20,0:16:39.13:0,39,626	1/1:8,0:8:11.22:255,11,0	1/1:7,0:7:5.82:95,6,0	0/0:10,0:8:14.26:0,14,211	0/0:14,0:12:33.11:0,33,527	0/0:8,0:6:12:0,12,163	0/0:17,0:17:35.31:0,35,529	0/0:19,0:17:44.77:0,45,688	1/1:19,0:17:23.77:570,24,0	0/0:37,0:32:64.17:0,64,984	1/1:16,0:14:39.07:830,39,0	0/1:10,0:10:5.90:230,0,6	1/1:6,0:4:6.01:72,6,0	0/0:12,0:12:20.70:0,21,308	0/0:8,0:8:19.54:0,20,182	0/0:31,0:27:29.17:0,29,517	0/0:13,0:12:27.56:0,28,290	0/1:12,0:12:86.58:358,0,87	0/1:21,0:19:39.22:562,0,39	1/1:26,0:25:44.29:903,44,0
chr10	86532881	.	A	AGAACC	3080.07	PASS	AB=0.875;AC=16;AF=0.308;AN=52;BaseQRankSum=0.829;DP=436;FS=0.000;HRun=0;HaplotypeScore=97.2781;InbreedingCoeff=0.4160;MQ=35.38;MQ0=32;MQRankSum=-3.363;QD=18.44;ReadPosRankSum=5.017;VQSLOD=3.0792;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,3:18:35.15:0,35,568	1/1:8,1:8:5.66:94,6,0	./.	./.	0/0:31,0:27:51.22:0,51,707	0/0:13,0:12:27.08:0,27,446	0/0:18,0:16:42.06:0,42,640	0/1:23,0:12:99:255,0,170	0/0:19,0:15:39.13:0,39,774	1/1:6,1:10:12.20:335,12,0	1/1:8,1:10:14.90:312,15,0	0/0:8,0:6:15.05:0,15,271	0/0:13,0:12:33.11:0,33,696	0/0:8,0:6:15.02:0,15,241	0/0:14,0:14:36.12:0,36,699	0/0:16,0:16:45.15:0,45,911	1/1:11,7:19:24.76:605,25,0	0/0:39,0:34:74.73:0,75,1338	0/1:11,6:17:25.24:651,0,25	0/1:9,0:9:52.02:52,0,141	1/1:5,0:4:5.60:37,6,0	0/0:11,0:11:21.03:0,21,398	0/0:9,0:9:24.07:0,24,368	0/0:29,0:25:35.36:0,35,632	0/0:13,0:12:28.90:0,29,434	0/1:12,0:12:99:237,0,219	0/1:11,4:18:99:244,0,207	0/1:23,4:26:6.44:432,0,6
chr10	86532882	.	A	AAACC	1588.04	PASS	AB=0.964;AC=14;AF=0.269;AN=52;BaseQRankSum=6.283;DP=428;FS=2.668;HRun=0;HaplotypeScore=79.1474;InbreedingCoeff=0.2419;MQ=35.51;MQ0=32;MQRankSum=-4.271;QD=9.86;ReadPosRankSum=4.726;VQSLOD=2.3850;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:17:35.30:0,35,385	0/1:6,4:9:19.93:30,0,20	./.	./.	0/0:31,0:27:52.36:0,52,557	0/0:14,0:13:30.07:0,30,371	0/0:17,0:15:36.07:0,36,443	0/1:23,0:11:89.16:89,0,230	0/0:19,0:15:39.13:0,39,535	1/1:11,0:11:21.40:262,21,0	1/1:9,0:10:11.81:162,12,0	0/0:7,0:5:15.05:0,15,191	0/0:13,0:12:33.11:0,33,464	0/0:7,0:6:15.05:0,15,186	0/0:15,0:15:39.06:0,39,486	0/0:16,0:16:45.12:0,45,609	1/1:20,0:18:31.91:371,32,0	0/0:39,0:34:75.23:0,75,1011	0/1:18,0:15:99:251,0,188	0/1:9,0:9:3.67:4,0,170	0/1:4,0:4:4.18:4,0,20	0/0:10,0:10:18.06:0,18,252	0/0:10,0:10:24.06:0,24,299	0/0:29,0:25:33.17:0,33,440	0/0:13,0:12:32.29:0,32,355	0/1:12,0:12:99:118,0,244	0/1:15,0:13:97.61:98,0,253	0/1:28,0:27:99:362,0,118
chr10	86533048	.	T	TAA	7077.19	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-8.760;DP=454;FS=0.000;HRun=10;HaplotypeScore=55.4503;InbreedingCoeff=0.9509;MQ=60.79;MQ0=0;MQRankSum=1.360;QD=31.74;ReadPosRankSum=0.705;VQSLOD=4.9691;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,35:37:95.77:1370,96,0	1/1:1,4:5:12.04:179,12,0	0/0:10,0:7:13.76:0,14,110	0/0:10,0:3:2.92:0,3,17	0/0:21,0:24:56.47:0,56,575	0/0:7,0:7:9:0,9,92	0/0:17,0:17:35.76:0,36,366	1/1:9,24:36:80.15:1048,80,0	0/0:15,0:15:33.04:0,33,327	1/1:2,10:13:32.60:455,33,0	1/1:3,10:15:35.61:493,36,0	0/0:11,0:11:27.03:0,27,268	0/0:14,0:15:35.77:0,36,340	0/0:7,0:7:11.98:0,12,115	0/0:22,0:23:56.82:0,57,554	0/0:20,0:20:45.08:0,45,458	1/1:9,20:31:71.19:981,71,0	0/0:23,0:24:56.79:0,57,554	1/1:4,13:19:46.18:618,46,0	1/1:2,9:12:29.59:411,30,0	1/1:1,6:10:22.54:250,23,0	0/0:6,0:6:18.03:0,18,176	0/0:16,0:16:36.07:0,36,366	0/0:8,0:8:18.03:0,18,183	0/0:17,0:18:47.84:0,48,470	1/1:6,10:21:40.06:460,40,0	1/1:1,14:16:41.63:590,42,0	1/1:0,8:8:15.05:223,15,0
chr10	86533237	.	T	TAAAA	6278.49	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=3.681;DP=503;FS=11.737;HRun=12;HaplotypeScore=92.5885;InbreedingCoeff=0.9666;MQ=56.55;MQ0=3;MQRankSum=-4.272;QD=23.96;ReadPosRankSum=-2.801;VQSLOD=1.8102;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:22:35.15:383,35,0	1/1:2,0:5:11.76:73,12,0	0/0:3,0:3:6.12:0,6,45	0/0:6,0:3:7.56:0,8,65	0/0:27,0:28:69.07:0,69,875	0/0:16,0:16:36.03:0,36,473	0/0:15,0:15:26.73:0,27,354	1/1:18,6:25:49.69:881,50,0	0/0:12,0:13:36.07:0,36,424	1/1:7,0:21:35.26:249,35,0	1/1:3,0:21:42.14:277,42,0	0/0:12,0:15:39.11:0,39,497	0/0:16,0:17:46.35:0,46,591	0/0:10,0:10:20.92:0,21,276	0/0:23,0:25:62.98:0,63,794	0/0:23,0:24:69.16:0,69,877	1/1:4,0:33:74.49:450,74,0	0/0:13,0:15:29.25:0,29,345	1/1:17,4:22:27:459,27,0	1/1:3,5:11:27.09:543,27,0	1/1:3,7:12:18.06:351,18,0	0/0:7,0:7:17.98:0,18,205	0/0:16,0:16:26.93:0,27,355	0/0:16,0:18:39:0,39,497	0/0:13,0:13:29.98:0,30,375	1/1:11,15:29:56.88:1081,57,0	1/1:12,12:27:39.13:732,39,0	1/1:8,11:25:42.14:799,42,0
chr10	86533611	.	C	CTT	4226.78	PASS	AB=0.944;AC=25;AF=0.446;AN=56;BaseQRankSum=-0.508;DP=499;FS=1.474;HRun=13;HaplotypeScore=76.5750;InbreedingCoeff=0.8290;MQ=56.95;MQ0=8;MQRankSum=-3.709;QD=15.95;ReadPosRankSum=-1.828;VQSLOD=3.6643;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,23:32:32.78:627,33,0	1/1:3,0:8:8.50:66,9,0	0/0:9,0:7:5.24:0,5,32	0/0:8,0:6:2.92:0,3,19	0/0:18,0:22:26.98:0,27,255	0/0:8,0:9:5.81:0,6,97	0/1:15,1:16:6.58:7,0,180	1/1:12,17:30:48.19:599,48,0	0/0:13,0:14:23.62:0,24,197	1/1:8,0:19:30.88:271,31,0	1/1:3,0:17:17.92:146,18,0	0/0:15,0:15:29.80:0,30,263	0/0:14,0:15:26.44:0,26,222	0/0:14,0:16:31.94:0,32,280	0/0:14,0:14:13.59:0,14,243	0/0:18,0:20:20.60:0,21,273	1/1:2,0:20:18.03:174,18,0	0/0:18,0:20:15.62:0,16,291	1/1:14,6:19:36.74:423,37,0	1/1:6,7:13:32.94:373,33,0	1/1:3,10:16:0.11:236,0,0	0/0:17,0:19:23.64:0,24,243	0/0:21,0:20:23.30:0,23,178	0/0:16,0:17:29.55:0,30,249	0/0:14,0:13:15.69:0,16,163	1/1:6,15:21:39.03:467,39,0	1/1:10,15:26:35.27:425,35,0	1/1:4,14:19:35.08:412,35,0
chr10	86534704	.	TA	T	4495.23	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=15.451;DP=533;FS=7.531;HRun=11;HaplotypeScore=88.5803;InbreedingCoeff=0.9031;MQ=60.71;MQ0=9;MQRankSum=-7.357;QD=18.65;ReadPosRankSum=-2.057;VQSLOD=4.7453;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,11:13:38.43:298,38,0	1/1:1,6:7:17.98:148,18,0	0/0:22,1:16:4.70:0,5,192	0/1:14,0:8:18.91:19,0,99	0/0:23,1:24:38.33:0,38,588	0/0:19,0:19:53.67:0,54,525	0/0:12,0:12:27.07:0,27,288	1/1:7,23:28:65.49:522,65,0	0/0:24,0:24:60.15:0,60,640	1/1:5,21:28:55.84:513,56,0	1/1:1,22:24:66.55:528,67,0	0/0:17,0:17:26.64:0,27,451	0/0:14,0:14:39.10:0,39,416	0/0:14,0:14:39.03:0,39,394	0/0:31,0:31:81.15:0,81,844	0/0:22,1:23:32.50:0,33,551	1/1:4,11:15:35.91:292,36,0	0/0:21,0:20:54.05:0,54,552	1/1:3,10:11:29.46:231,29,0	1/1:2,30:32:92.38:738,92,0	1/1:1,5:6:11.99:98,12,0	0/0:13,0:13:19.87:0,20,336	0/0:19,0:21:47.93:0,48,478	0/0:11,0:11:27.07:0,27,288	0/0:23,0:23:60.12:0,60,617	1/1:4,16:20:47.94:394,48,0	1/1:6,21:26:65.91:541,66,0	1/1:0,7:7:20.98:172,21,0
chr10	86534741	.	T	TA	6462.95	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=7.600;DP=626;FS=9.698;HRun=9;HaplotypeScore=102.8634;InbreedingCoeff=0.9597;MQ=71.18;MQ0=6;MQRankSum=-9.791;QD=24.76;ReadPosRankSum=-1.071;VQSLOD=3.9760;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,11:15:33.08:354,33,0	1/1:1,7:8:21.06:232,21,0	0/0:47,0:28:34.01:0,34,310	0/0:39,0:25:8.37:0,8,237	0/0:29,0:29:80.94:0,81,694	0/0:26,0:26:62.96:0,63,547	0/0:7,0:7:14.99:0,15,130	1/1:10,21:31:69.19:762,69,0	0/0:21,0:21:56.98:0,57,495	1/1:5,30:35:93.24:1019,93,0	1/1:7,26:33:72.19:793,72,0	0/0:18,0:18:53.99:0,54,468	0/0:19,0:19:44.97:0,45,390	0/0:18,0:18:47.97:0,48,412	0/0:28,0:28:74.96:0,75,650	0/0:17,0:17:35.98:0,36,313	1/1:3,16:19:39.10:428,39,0	0/0:18,0:17:38.97:0,39,338	1/1:9,10:17:13.08:364,13,0	1/1:10,26:36:41.16:893,41,0	1/1:2,2:4:3.01:33,3,0	0/0:16,0:16:35.99:0,36,313	0/0:22,0:22:56.84:0,57,490	0/0:11,0:11:32.99:0,33,286	0/0:28,0:28:68.96:0,69,596	1/1:5,15:20:25.07:495,25,0	1/1:8,18:27:35:722,35,0	1/1:4,9:13:36.04:367,36,0
chr10	86534771	.	C	CA	4374.27	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=0.414;DP=612;FS=8.618;HRun=7;HaplotypeScore=93.1456;InbreedingCoeff=0.9970;MQ=76.70;MQ0=5;MQRankSum=-7.148;QD=28.59;ReadPosRankSum=-2.331;VQSLOD=3.8685;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:54.08:0,54,521	0/0:11,0:11:27.04:0,27,261	0/0:44,0:29:26.60:0,27,309	0/0:35,0:26:17.56:0,18,254	0/0:26,0:26:63.08:0,63,603	0/0:25,0:25:60.09:0,60,579	0/0:14,0:14:34.29:0,34,316	1/1:9,17:26:54.11:624,54,0	0/0:11,0:11:27.04:0,27,261	0/0:37,0:37:96.14:0,96,923	0/0:28,0:27:63.08:0,63,602	0/0:14,0:14:24.02:0,24,232	0/0:17,0:17:39.05:0,39,376	0/0:15,0:15:42.02:0,42,395	0/0:25,0:25:63.09:0,63,608	0/0:17,0:17:42.07:0,42,405	0/0:21,0:21:45.07:0,45,434	0/0:18,0:18:41.35:0,41,404	1/1:9,21:28:63.15:733,63,0	1/1:1,27:28:78.16:909,78,0	1/1:0,9:9:27.08:326,27,0	0/0:15,0:15:39.06:0,39,376	0/0:17,0:17:47.91:0,48,450	0/0:16,0:16:42.06:0,42,406	0/0:27,0:27:75.12:0,75,723	1/1:4,18:22:28.19:623,28,0	1/1:4,18:22:54.17:652,54,0	1/1:2,14:16:42.13:507,42,0
chr10	86535200	.	CA	C	738.99	PASS	AB=0.849;AC=14;AF=0.250;AN=56;BaseQRankSum=4.977;DP=574;FS=14.259;HRun=15;HaplotypeScore=72.5573;InbreedingCoeff=0.2485;MQ=66.47;MQ0=0;MQRankSum=-0.703;QD=3.75;ReadPosRankSum=2.152;VQSLOD=-0.3580;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:26:51.96:0,52,391	0/1:5,1:6:4.30:4,0,82	0/0:12,0:10:4.53:0,5,58	0/0:18,0:12:7.21:0,7,45	0/0:26,2:28:35.17:0,35,416	0/0:24,1:27:36.50:0,37,397	0/0:13,0:13:26.92:0,27,215	0/1:18,7:26:24.28:101,0,24	0/0:10,1:18:3.11:0,3,127	0/1:15,2:18:3.50:3,0,208	0/0:13,1:17:14.89:0,15,228	0/0:20,0:20:33.38:0,33,268	0/0:10,0:10:23.75:0,24,176	0/0:19,0:19:38.96:0,39,331	0/0:30,1:33:46.38:0,46,502	0/0:34,1:36:40.19:0,40,543	0/0:26,1:27:48.13:0,48,510	0/0:18,5:23:9.19:0,9,292	0/1:14,5:22:7.17:130,0,7	1/1:5,15:21:43.23:289,43,0	0/1:19,0:19:6.59:7,0,64	0/1:11,1:12:1.28:1,0,111	0/1:9,3:14:28.18:28,0,120	0/0:23,2:25:34.73:0,35,424	0/0:22,2:24:26.92:0,27,339	1/1:11,13:26:19.49:171,19,0	0/1:16,6:23:21.39:124,0,21	1/1:7,3:10:5.70:38,6,0
chr10	86537014	.	GGTTTTTTTTTTC	G	2123.61	PASS	AB=0.670;AC=12;AF=0.214;AN=56;BaseQRankSum=5.046;DP=495;FS=15.180;HRun=0;HaplotypeScore=123.4362;InbreedingCoeff=0.7355;MQ=53.44;MQ0=64;MQRankSum=-3.499;QD=17.70;ReadPosRankSum=-1.291;VQSLOD=1.4372;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:33:57.17:0,57,2205	0/0:2,0:2:6.02:0,6,248	0/0:21,0:5:11.69:0,12,201	0/0:25,0:10:19.81:0,20,392	0/0:22,0:19:42.56:0,43,1525	0/0:14,0:13:24.55:0,25,1138	0/0:17,0:14:33.11:0,33,960	1/1:15,0:12:21.05:334,21,0	0/0:11,0:11:30.10:0,30,1471	0/0:19,0:14:42.14:0,42,1638	0/0:9,0:8:15.05:0,15,510	0/0:20,0:18:39.13:0,39,1366	0/0:19,0:17:47.87:0,48,1949	0/0:14,0:13:27.96:0,28,968	0/0:22,0:19:54.19:0,54,2414	0/0:23,0:20:56.59:0,57,2611	0/0:24,0:22:63.14:0,63,2251	0/0:16,0:12:29.81:0,30,1267	0/1:8,6:15:99:303,0,122	1/1:2,18:19:14.94:250,15,0	1/1:14,1:13:24.04:394,24,0	0/0:12,0:8:21.07:0,21,805	0/0:16,0:13:39.13:0,39,1504	0/0:21,0:17:24.55:0,25,1186	0/0:12,0:11:24.08:0,24,1045	0/1:6,9:13:99:361,0,110	1/1:14,1:15:10.27:253,10,0	1/1:21,4:6:12.01:405,12,0
chr10	86537246	.	TATCTATCC	T	1627.57	PASS	AB=0.792;AC=10;AF=0.179;AN=56;BaseQRankSum=4.439;DP=580;FS=2.354;HRun=0;HaplotypeScore=166.4996;InbreedingCoeff=0.7482;MQ=54.53;MQ0=0;MQRankSum=-3.248;QD=13.23;ReadPosRankSum=0.181;VQSLOD=2.7759;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:35.89:301,36,0	0/1:4,10:14:0:0,0,0	0/0:4,0:3:1.26:0,1,51	0/0:3,0:1:2.84:0,3,14	0/0:23,0:23:58.38:0,58,1687	0/0:12,0:12:36.07:0,36,886	0/0:12,0:12:23.58:0,24,423	0/0:41,0:41:99:0,103,933	0/0:19,0:19:51.11:0,51,1487	1/1:25,2:26:69.02:976,69,0	1/1:9,1:10:26.50:278,26,0	0/0:28,0:28:78.02:0,78,1556	0/0:24,0:24:66.05:0,66,1511	0/0:20,0:20:48.11:0,48,1540	0/0:28,0:28:78.17:0,78,2209	0/0:41,0:41:99:0,120,3096	1/1:15,0:15:23.61:224,24,0	0/0:20,0:20:35.95:0,36,1565	0/0:14,0:11:30.06:0,30,467	0/0:33,0:30:74.75:0,75,1027	0/0:13,0:13:33.04:0,33,468	0/0:15,0:15:36.04:0,36,730	0/0:23,0:21:5.32:0,5,271	0/0:15,0:15:36.02:0,36,489	0/0:19,0:19:48.07:0,48,1255	0/1:33,0:32:8.27:8,0,665	0/0:30,0:29:51.91:0,52,837	0/0:20,0:20:51:0,51,608
chr10	86537254	.	C	CATCT	2470.04	PASS	AB=0.907;AC=21;AF=0.420;AN=50;BaseQRankSum=3.457;DP=598;FS=16.014;HRun=0;HaplotypeScore=129.8471;InbreedingCoeff=0.5880;MQ=53.27;MQ0=1;MQRankSum=-1.199;QD=8.02;ReadPosRankSum=3.560;VQSLOD=1.9614;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:2.71:21,3,0	./.	./.	./.	0/0:19,0:19:42.12:0,42,617	0/0:13,0:13:21.05:0,21,298	0/0:10,0:10:5.98:0,6,89	0/1:51,0:50:11.97:30,0,12	0/0:18,0:18:30.08:0,30,439	0/0:24,0:23:1.69:0,2,104	0/0:10,0:9:0:0,0,0	0/1:28,0:28:31.15:31,0,416	0/0:27,0:27:36.09:0,36,510	0/0:21,0:21:42.13:0,42,622	0/0:31,0:31:54.17:0,54,804	0/0:45,0:45:69.18:0,69,971	0/0:16,0:16:2.83:0,3,23	0/0:22,0:22:38.75:0,39,586	1/1:13,1:10:9.03:205,9,0	1/1:35,1:31:26.98:534,27,0	1/1:15,0:14:9.03:184,9,0	0/0:14,0:14:15.04:0,15,209	1/1:23,0:21:8.57:60,9,0	1/1:13,1:14:15.05:303,15,0	0/1:11,7:18:99:324,0,157	1/1:33,0:30:11.82:247,12,0	1/1:32,2:33:29.71:503,30,0	1/1:17,0:17:15.01:208,15,0
chr10	86537293	.	CT	C	2018.62	PASS	AB=0.891;AC=17;AF=0.304;AN=56;BaseQRankSum=11.808;DP=611;FS=3.772;HRun=1;HaplotypeScore=132.8600;InbreedingCoeff=0.1674;MQ=50.88;MQ0=11;MQRankSum=-0.446;QD=6.77;ReadPosRankSum=-1.188;VQSLOD=0.2578;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,2:18:37.72:81,0,38	1/1:8,4:11:5.48:30,5,0	1/1:6,1:2:3.01:40,3,0	0/0:6,0:1:3:0,3,25	0/0:21,0:21:60.20:0,60,935	0/0:13,0:13:39.13:0,39,601	0/0:11,0:11:16.87:0,17,240	0/1:39,0:33:26.12:26,0,836	0/0:22,0:22:63.18:0,63,929	1/1:12,16:25:71.45:687,71,0	0/1:19,2:20:15.22:66,0,15	0/0:27,0:27:81.26:0,81,1206	0/0:30,0:30:90.28:0,90,1340	0/0:26,0:26:75.23:0,75,1120	0/0:30,0:30:87.28:0,87,1336	0/0:37,0:37:99:0,105,1608	1/1:15,3:17:14.58:148,15,0	0/0:23,0:23:59.69:0,60,895	0/1:10,0:8:6.57:7,0,188	0/1:33,7:35:99:254,0,395	0/1:13,4:16:99:117,0,167	0/0:14,0:14:39.12:0,39,573	0/0:21,0:19:44.80:0,45,644	0/0:12,0:12:26.74:0,27,356	0/0:20,0:20:54.16:0,54,744	0/1:22,5:20:99:105,0,424	0/1:30,7:36:99:281,0,311	0/1:20,4:24:99:351,0,190
chr10	86537297	.	CT	C	1771.27	PASS	AB=0.918;AC=17;AF=0.304;AN=56;BaseQRankSum=11.785;DP=605;FS=4.444;HRun=1;HaplotypeScore=133.0600;InbreedingCoeff=0.1756;MQ=51.03;MQ0=11;MQRankSum=-1.414;QD=6.13;ReadPosRankSum=0.879;VQSLOD=0.6584;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,2:18:35.76:85,0,36	1/1:10,0:9:9:78,9,0	1/1:7,0:2:3.01:34,3,0	0/0:6,0:1:3.01:0,3,42	0/0:23,0:23:66.22:0,66,1008	0/0:12,0:12:36.12:0,36,547	0/0:9,0:9:12.04:0,12,186	0/1:30,6:30:22.53:23,0,694	0/0:22,0:22:63.21:0,63,950	1/1:26,2:25:26.78:364,27,0	0/1:22,0:21:3.54:4,0,32	0/0:28,0:28:84.28:0,84,1245	0/0:29,0:29:87.29:0,87,1311	0/0:27,0:27:78.25:0,78,1167	0/0:31,0:31:87.29:0,87,1338	0/0:37,0:37:99:0,105,1628	1/1:16,1:16:10.39:81,10,0	0/0:23,0:23:57.41:0,57,895	0/1:8,1:6:34.11:34,0,64	0/1:33,4:32:99:266,0,265	0/1:15,0:14:99:124,0,103	0/0:14,0:14:39.13:0,39,578	0/0:22,0:20:41.71:0,42,560	0/0:12,0:12:26.71:0,27,326	0/0:21,0:21:57.17:0,57,773	0/1:21,9:23:99:152,0,262	0/1:35,1:36:99:342,0,200	0/1:23,1:24:99:357,0,169
chr10	86537298	.	TATC	T	4131.07	PASS	AB=0.938;AC=22;AF=0.393;AN=56;BaseQRankSum=13.064;DP=604;FS=3.313;HRun=0;HaplotypeScore=143.4675;InbreedingCoeff=0.4861;MQ=51.04;MQ0=11;MQRankSum=-1.720;QD=13.16;ReadPosRankSum=-2.235;VQSLOD=3.0450;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,1:18:15.67:151,16,0	1/1:6,3:8:8.20:51,8,0	0/0:7,0:2:2.46:0,2,20	0/0:6,0:1:3:0,3,29	0/0:23,0:23:66.67:0,67,1217	0/0:12,0:12:36.12:0,36,633	0/0:9,0:9:8.93:0,9,152	0/1:35,0:29:61.76:62,0,519	0/0:22,0:22:63.20:0,63,1042	1/1:14,14:25:73.35:814,73,0	0/1:20,1:20:10.84:14,0,11	0/0:28,0:28:84.20:0,84,1385	0/0:29,0:29:87.29:0,87,1517	0/0:27,0:27:78.26:0,78,1400	0/0:32,0:32:90.30:0,90,1641	0/0:37,0:37:99:0,102,1948	1/1:14,3:16:11.41:144,11,0	0/0:22,0:23:21.81:0,22,1003	0/1:9,0:6:22.72:102,0,23	1/1:27,10:32:23.26:563,23,0	1/1:9,6:14:27.06:292,27,0	0/0:14,0:14:39.13:0,39,676	0/1:22,0:20:89.39:89,0,548	0/1:10,2:12:75.36:75,0,249	0/0:21,0:21:54.18:0,54,896	1/1:24,6:23:34.64:638,35,0	0/1:28,8:35:39.86:509,0,40	1/1:21,4:25:40.42:628,40,0
chr10	86537301	.	C	CTCT	2651.80	PASS	AB=0.853;AC=23;AF=0.411;AN=56;BaseQRankSum=12.763;DP=609;FS=0.398;HRun=0;HaplotypeScore=152.9319;InbreedingCoeff=0.6340;MQ=51.19;MQ0=11;MQRankSum=-1.158;QD=9.34;ReadPosRankSum=-0.671;VQSLOD=3.3035;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:18:15.40:126,15,0	1/1:7,0:8:9:78,9,0	1/1:8,0:2:2.49:6,2,0	0/0:6,0:1:3.01:0,3,43	0/0:23,0:23:66.01:0,66,1170	0/0:13,0:13:36.12:0,36,636	0/0:8,0:9:11.82:0,12,174	0/1:26,0:26:50.93:51,0,785	0/0:21,0:22:63.20:0,63,1115	0/1:24,0:24:18.68:358,0,19	1/1:5,1:23:2.65:18,3,0	0/0:29,0:30:82.51:0,83,1454	0/0:32,0:32:90.29:0,90,1611	0/0:28,0:28:81.26:0,81,1442	0/0:31,0:31:90.31:0,90,1624	0/0:36,0:36:99:0,102,1826	1/1:14,0:16:4.47:71,4,0	0/0:23,0:24:56.48:0,56,1005	0/1:7,0:6:28.06:76,0,28	1/1:26,0:33:40.85:389,41,0	1/1:14,0:13:18.29:169,18,0	0/0:15,0:15:42.13:0,42,751	0/0:18,0:20:32.83:0,33,713	0/0:12,0:13:0.50:0,0,236	0/0:21,0:21:48.98:0,49,767	1/1:11,0:23:48.08:381,48,0	1/1:28,0:32:61.23:539,61,0	1/1:21,0:25:65.21:587,65,0
chr10	86537399	.	ATCTATCTGTCTG	A	3556.73	PASS	AB=0.818;AC=13;AF=0.232;AN=56;BaseQRankSum=4.863;DP=668;FS=2.487;HRun=0;HaplotypeScore=236.4804;InbreedingCoeff=0.7365;MQ=56.63;MQ0=8;MQRankSum=-4.469;QD=22.09;ReadPosRankSum=-2.006;VQSLOD=2.6015;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:18:32.48:0,32,701	0/0:7,0:7:8.67:0,9,228	0/0:33,0:15:17.19:0,17,343	0/0:12,0:9:11.25:0,11,148	0/0:22,0:22:54.19:0,54,2368	0/0:22,0:22:48.13:0,48,2081	0/0:11,0:11:24.02:0,24,715	1/1:23,0:21:15.02:163,15,0	0/0:30,0:30:72.19:0,72,2907	0/0:46,0:44:99:0,108,2098	0/0:24,0:24:25.62:0,26,578	0/0:25,0:25:57.20:0,57,2420	0/0:39,0:39:93.28:0,93,3997	0/0:26,0:26:69.19:0,69,2861	0/0:39,0:39:99:0,105,4567	0/0:46,0:46:99:0,126,5379	0/0:16,0:16:34.45:0,34,696	0/1:15,0:15:19.03:19,0,348	1/1:1,9:10:27.05:666,27,0	0/1:2,24:25:0:1,0,0	1/1:16,0:15:11.99:122,12,0	0/0:23,0:22:63.19:0,63,2616	0/0:28,0:28:75.12:0,75,2662	0/0:22,0:21:44.83:0,45,1707	0/0:14,0:14:33.03:0,33,1129	1/1:4,24:28:62.94:1547,63,0	1/1:0,29:29:26.99:941,27,0	0/1:13,1:14:69.78:99,0,70
chr10	86537415	.	ATCTG	A	3920.65	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=13.604;DP=646;FS=10.156;HRun=0;HaplotypeScore=129.6386;InbreedingCoeff=0.6033;MQ=54.31;MQ0=13;MQRankSum=-2.928;QD=18.07;ReadPosRankSum=3.005;VQSLOD=2.4736;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,12:15:27.09:512,27,0	1/1:0,8:8:9.03:171,9,0	0/0:32,0:10:21.06:0,21,372	0/0:9,0:4:8.70:0,9,137	0/0:24,0:23:66.17:0,66,1503	0/0:18,0:18:48.15:0,48,1206	0/0:12,0:12:21.07:0,21,505	0/1:12,0:9:8.96:9,0,187	0/0:28,0:28:78.25:0,78,1919	1/1:1,39:38:99:1873,111,0	1/1:1,20:21:20.97:399,21,0	0/0:28,0:28:81.17:0,81,1663	0/0:35,0:35:99:0,102,2438	0/0:28,0:28:81.22:0,81,1845	0/0:42,0:42:99:0,126,2801	0/0:49,0:49:99:0,147,3377	1/1:8,12:17:23.05:542,23,0	0/0:16,0:16:7.09:0,7,179	0/1:11,0:10:37.98:79,0,38	0/0:27,0:25:4.99:0,5,72	1/1:11,0:9:2.99:24,3,0	0/0:22,0:21:62.76:0,63,1424	0/0:25,0:25:66.21:0,66,1672	0/0:21,0:20:42.14:0,42,1075	0/0:13,0:13:36.11:0,36,845	0/1:32,0:29:99:112,0,256	1/1:29,0:29:24.39:188,24,0	0/1:13,0:13:12.08:12,0,48
chr10	86537419	.	GTCTATCTATCTATCA	G	50.98	PASS	AB=1.000;AC=3;AF=0.056;AN=54;BaseQRankSum=5.158;DP=650;FS=10.384;HRun=0;HaplotypeScore=257.0403;InbreedingCoeff=0.4238;MQ=54.27;MQ0=15;MQRankSum=-4.878;QD=1.04;ReadPosRankSum=2.418;VQSLOD=0.6406;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:15:27.01:0,27,833	0/0:8,0:8:9.03:0,9,352	0/0:29,0:7:8.85:0,9,106	0/0:11,0:4:5.99:0,6,91	0/0:26,0:25:54.13:0,54,2315	0/0:17,0:17:48.15:0,48,1826	0/0:11,0:11:24.04:0,24,550	0/0:11,0:7:15.05:0,15,344	0/0:26,0:26:72.12:0,72,2273	0/0:40,0:38:93.10:0,93,2865	0/0:21,0:21:24.08:0,24,808	0/0:28,0:28:63.15:0,63,2594	0/0:35,0:35:93.24:0,93,3785	0/0:28,0:28:78.19:0,78,3247	0/0:43,0:43:96.27:0,96,3951	0/0:50,0:50:99:0,117,4629	0/0:20,0:17:33.03:0,33,1013	1/1:5,11:16:3.48:128,3,0	0/0:12,0:11:15.18:0,15,278	0/0:29,0:27:12.04:0,12,350	./.	0/0:24,0:23:54.14:0,54,1814	0/0:25,0:25:57.11:0,57,1821	0/0:21,0:20:36.08:0,36,1366	0/0:13,0:13:24.06:0,24,858	0/0:35,0:31:46.95:0,47,1008	0/1:33,0:33:2.68:3,0,436	0/0:7,0:7:8.39:0,8,186
chr10	86537467	.	C	CT	216.78	PASS	AB=0.776;AC=4;AF=0.071;AN=56;BaseQRankSum=4.651;DP=730;FS=2.507;HRun=1;HaplotypeScore=96.2441;InbreedingCoeff=0.3232;MQ=52.75;MQ0=19;MQRankSum=-3.335;QD=3.74;ReadPosRankSum=0.120;VQSLOD=0.2264;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,6:23:90.23:90,0,143	0/0:12,0:12:30.10:0,30,420	0/0:20,0:1:3.01:0,3,42	0/0:17,0:2:2.56:0,3,19	0/0:29,3:30:72.24:0,72,1003	0/0:17,0:17:51.15:0,51,695	0/0:10,0:10:22.10:0,22,278	0/0:49,0:39:99:0,111,1540	0/0:25,0:25:72.24:0,72,1005	0/0:38,0:38:99:0,110,1498	0/0:25,0:24:51.14:0,51,675	0/0:32,0:32:93.31:0,93,1301	0/0:30,0:30:90.27:0,90,1224	0/0:31,0:31:90.30:0,90,1258	0/0:41,0:41:99:0,120,1658	0/0:46,0:46:99:0,138,1902	0/0:28,1:27:51.61:0,52,789	0/1:16,2:18:91.30:91,0,174	0/0:14,0:12:33.07:0,33,438	0/0:25,0:23:57.19:0,57,797	0/0:18,0:15:15.04:0,15,210	0/0:24,0:24:72.24:0,72,1007	0/0:21,0:22:57.19:0,57,797	0/0:24,1:25:54.18:0,54,754	0/0:12,0:12:36.12:0,36,504	0/0:38,2:35:45.33:0,45,1210	0/0:37,0:37:75.18:0,75,1006	1/1:6,4:10:8.03:142,8,0
chr10	86537554	.	GTCTA	G	7698.51	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=14.915;DP=710;FS=8.617;HRun=0;HaplotypeScore=133.6987;InbreedingCoeff=0.9820;MQ=55.38;MQ0=7;MQRankSum=0.515;QD=25.41;ReadPosRankSum=2.501;VQSLOD=4.4517;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,19:28:38.07:663,38,0	1/1:2,9:10:14.07:255,14,0	0/0:20,0:8:18.06:0,18,343	0/0:15,0:9:15.05:0,15,298	0/0:27,0:27:66.23:0,66,1574	0/0:25,0:25:69.24:0,69,1594	0/0:17,0:17:36.08:0,36,852	1/1:17,15:25:24.05:346,24,0	0/0:30,0:30:84.29:0,84,1928	1/1:7,20:27:66.23:1122,66,0	1/1:5,13:18:14.72:255,15,0	0/0:25,0:25:57.17:0,57,1270	0/0:22,0:22:60.21:0,60,1412	0/0:31,0:31:78.25:0,78,1758	0/0:40,0:40:99:0,99,2410	0/0:32,0:32:87.30:0,87,2067	1/1:6,31:37:66.09:1076,66,0	0/0:22,0:22:8.55:0,9,1059	1/1:6,11:15:27.05:428,27,0	1/1:3,22:25:43.48:765,43,0	1/1:5,21:26:42.14:716,42,0	0/0:16,0:16:33.10:0,33,707	0/0:32,0:31:78.27:0,78,1882	0/0:30,0:30:56.89:0,57,1403	0/0:22,0:22:66.23:0,66,1539	1/1:11,16:24:54.17:894,54,0	1/1:9,22:31:27.09:460,27,0	1/1:2,20:22:42.61:716,43,0
chr10	86537640	.	ATCTG	A	1420.59	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=3.883;DP=843;FS=2.764;HRun=0;HaplotypeScore=151.1244;InbreedingCoeff=0.3583;MQ=53.52;MQ0=20;MQRankSum=0.970;QD=6.93;ReadPosRankSum=3.651;VQSLOD=2.7418;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,7:33:40.98:624,41,0	0/1:16,0:15:48.92:49,0,94	0/0:26,0:6:17.88:0,18,143	0/1:23,0:4:1.65:2,0,48	0/0:43,0:42:94.05:0,94,1263	0/0:22,0:22:51.03:0,51,795	0/0:27,0:27:59.95:0,60,809	0/0:36,0:35:50.82:0,51,418	0/0:28,0:28:57.09:0,57,1003	0/1:42,0:41:99:245,0,339	0/1:35,0:34:99:162,0,234	0/0:37,0:37:90.05:0,90,1337	0/0:28,0:28:66.02:0,66,956	0/0:34,0:34:56.10:0,56,1283	0/0:34,0:34:81.03:0,81,1160	0/0:36,0:36:87.08:0,87,1369	0/1:30,0:30:99:225,0,129	1/1:23,0:23:38.93:263,39,0	0/0:20,0:16:23.92:0,24,422	0/0:39,0:35:81.01:0,81,1129	0/0:32,0:32:64.40:0,64,1114	0/0:25,0:25:66.06:0,66,1052	0/0:30,0:30:63.07:0,63,1068	0/0:27,0:27:62.94:0,63,1147	0/0:27,0:27:66.06:0,66,1026	0/0:34,0:31:44.98:0,45,1052	0/0:31,0:31:62.97:0,63,1088	0/0:22,0:21:8.97:0,9,369
chr10	86537656	.	G	GTCTA	2432.71	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.861;DP=770;FS=7.352;HRun=0;HaplotypeScore=144.7249;InbreedingCoeff=0.9442;MQ=54.63;MQ0=10;MQRankSum=1.538;QD=17.38;ReadPosRankSum=-1.689;VQSLOD=2.7963;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:20.28:0,20,360	1/1:3,13:16:9.47:275,9,0	0/0:12,0:6:18.02:0,18,240	0/0:15,0:4:11.98:0,12,150	0/0:37,0:37:24.57:0,25,1227	0/0:19,0:19:57.10:0,57,834	0/0:23,0:23:57.19:0,57,953	0/0:33,0:28:74.69:0,75,909	0/0:27,0:27:72.14:0,72,1098	1/1:35,4:38:66.43:902,66,0	1/1:20,8:28:40.38:761,40,0	0/0:32,0:32:93.24:0,93,1452	0/0:25,0:25:75.21:0,75,1196	0/0:29,0:29:81.23:0,81,1343	0/0:30,0:30:81.21:0,81,1282	0/0:35,0:35:96.23:0,96,1510	1/1:30,5:35:40.23:592,40,0	1/1:19,0:22:9.81:72,10,0	0/0:16,0:14:38.62:0,39,494	0/0:42,0:38:92.79:0,93,1455	0/0:33,0:33:73.09:0,73,1290	0/0:27,0:27:78.19:0,78,1224	0/0:30,0:30:78.18:0,78,1237	0/0:27,0:27:57.58:0,58,1020	0/0:25,0:25:75.21:0,75,1220	0/0:30,1:29:6.72:0,7,1110	0/0:27,0:27:65.99:0,66,1080	0/0:17,0:15:30.01:0,30,456
chr10	86537660	.	G	GTCTA	2719.87	PASS	AB=0.933;AC=12;AF=0.231;AN=52;BaseQRankSum=8.533;DP=755;FS=0.519;HRun=0;HaplotypeScore=144.2367;InbreedingCoeff=0.7254;MQ=54.81;MQ0=9;MQRankSum=2.192;QD=12.89;ReadPosRankSum=-1.234;VQSLOD=3.2296;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:41.85:0,42,420	1/1:16,0:16:11.97:282,12,0	./.	./.	0/1:33,6:38:99:176,0,355	0/0:22,0:22:30.05:0,30,396	0/0:24,0:24:18.03:0,18,251	0/0:33,0:27:14.86:0,15,126	0/0:25,0:25:48.03:0,48,598	1/1:39,0:38:71.95:952,72,0	1/1:31,0:31:44.62:786,45,0	0/0:30,0:30:30.07:0,30,418	0/0:26,0:26:33.07:0,33,441	0/0:31,0:31:49.36:0,49,677	0/0:30,0:30:33.08:0,33,465	0/0:31,0:31:54.13:0,54,746	1/1:35,0:35:48.16:649,48,0	1/1:22,0:22:2.73:19,3,0	0/0:15,0:13:17.92:0,18,225	0/0:40,0:36:47.61:0,48,598	0/0:30,0:30:48.09:0,48,628	0/0:28,0:28:48.06:0,48,611	0/0:30,0:30:54.07:0,54,685	0/0:25,0:25:41.66:0,42,558	0/0:27,0:27:36.07:0,36,470	0/1:29,0:27:25.27:25,0,537	0/0:26,0:26:41.91:0,42,597	0/0:16,0:14:18.01:0,18,229
chr10	86538356	.	A	AT	4345.40	PASS	AB=1.000;AC=24;AF=0.444;AN=54;BaseQRankSum=0.789;DP=510;FS=5.574;HRun=10;HaplotypeScore=81.9566;InbreedingCoeff=0.8794;MQ=68.08;MQ0=8;MQRankSum=-5.141;QD=14.34;ReadPosRankSum=-1.521;VQSLOD=4.7504;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,1:24:45.80:248,46,0	1/1:2,8:10:18.05:192,18,0	0/1:46,0:22:3.63:4,0,169	0/1:33,0:8:0.42:19,0,0	0/0:17,0:17:33.21:0,33,310	0/0:15,0:15:32.94:0,33,270	0/0:11,0:12:25.99:0,26,202	1/1:3,25:29:65.57:712,66,0	0/0:12,0:12:29.94:0,30,246	1/1:12,10:21:41.27:409,41,0	1/1:11,9:19:20.18:369,20,0	0/0:18,0:20:51.97:0,52,397	0/0:13,0:13:29.95:0,30,243	0/0:12,0:12:28.20:0,28,224	0/0:17,0:17:50.92:0,51,415	0/0:20,0:21:44.53:0,45,427	1/1:8,19:27:57.14:607,57,0	0/0:21,0:22:35.41:0,35,380	1/1:8,12:20:35.59:344,36,0	1/1:6,7:13:30.01:295,30,0	./.	0/0:1,0:1:3:0,3,25	0/0:10,0:10:20.95:0,21,172	0/0:9,0:9:23.97:0,24,197	0/0:21,1:21:18.92:0,19,361	1/1:10,15:25:30.66:508,31,0	1/1:4,8:12:27.07:287,27,0	1/1:0,13:13:33.08:352,33,0
chr10	86538379	.	C	CT	1179.32	PASS	AB=0.894;AC=25;AF=0.446;AN=56;BaseQRankSum=7.074;DP=538;FS=6.721;HRun=14;HaplotypeScore=78.9142;InbreedingCoeff=0.4261;MQ=48.74;MQ0=36;MQRankSum=-6.420;QD=3.26;ReadPosRankSum=-2.457;VQSLOD=-0.0320;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:21,4:22:11.53:104,0,12	1/1:7,2:8:11.84:93,12,0	0/1:40,0:9:0:0,0,0	0/1:36,0:7:6.69:7,0,11	0/1:14,1:17:32.41:32,0,85	0/1:9,4:13:8.15:8,0,78	0/0:15,0:14:28.08:0,28,165	0/1:32,3:35:2.13:125,0,2	0/0:15,0:13:4.10:0,4,100	1/1:17,7:22:16.27:223,16,0	1/1:13,11:21:11.80:218,12,0	0/0:19,0:17:32.57:0,33,177	0/0:9,0:8:17.64:0,18,111	0/0:13,0:13:18.58:0,19,106	0/0:20,0:22:38.89:0,39,229	0/0:19,1:19:2.98:0,3,127	0/1:23,3:21:18.89:120,0,19	0/0:22,0:18:31.03:0,31,184	1/1:21,2:21:21.49:114,21,0	1/1:12,0:13:14.39:99,14,0	0/1:4,0:3:0:0,0,0	0/0:3,0:3:8.87:0,9,57	0/0:14,0:14:30.25:0,30,163	0/1:11,3:11:8.58:9,0,78	0/0:18,0:19:42.47:0,42,260	1/1:17,0:18:7.71:71,8,0	1/1:18,1:19:18.53:96,19,0	1/1:11,0:12:8.58:44,9,0
chr10	86538779	.	CA	C	3108.20	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=6.468;DP=454;FS=2.197;HRun=1;HaplotypeScore=48.7618;InbreedingCoeff=0.9404;MQ=54.95;MQ0=20;MQRankSum=-2.110;QD=28.52;ReadPosRankSum=-1.524;VQSLOD=3.0316;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.22:0,72,1093	0/0:4,0:4:12.04:0,12,183	0/0:21,0:14:39.10:0,39,520	0/0:18,0:13:37.36:0,37,489	0/0:13,0:12:33.11:0,33,527	0/0:23,0:20:52.80:0,53,851	0/0:20,0:20:57.19:0,57,894	1/1:0,20:19:51.16:712,51,0	0/0:15,0:15:45.15:0,45,713	0/0:8,0:8:17.84:0,18,276	0/0:8,0:8:21.07:0,21,335	0/0:22,0:21:60.20:0,60,940	0/0:18,0:18:54.18:0,54,839	0/0:21,0:21:63.17:0,63,935	0/0:21,0:20:54.06:0,54,806	0/0:18,0:18:54.17:0,54,829	0/0:16,0:16:44.81:0,45,704	0/0:14,0:11:33.11:0,33,499	1/1:2,10:10:30.04:376,30,0	1/1:0,8:8:20.83:293,21,0	1/1:4,36:37:72.24:998,72,0	0/0:10,0:10:30.02:0,30,412	0/0:9,0:7:14.43:0,14,238	0/0:33,0:33:95.80:0,96,1456	0/0:6,0:6:14.97:0,15,173	1/1:4,14:15:2.37:541,2,0	1/1:0,6:6:15.05:210,15,0	1/1:1,4:4:12.04:168,12,0
chr10	86539506	.	C	CAA	3978.41	PASS	AB=0.746;AC=23;AF=0.411;AN=56;BaseQRankSum=-0.929;DP=505;FS=3.146;HRun=13;HaplotypeScore=72.0273;InbreedingCoeff=0.8174;MQ=57.41;MQ0=30;MQRankSum=-1.740;QD=15.54;ReadPosRankSum=-2.584;VQSLOD=2.2657;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,17:34:71.65:872,72,0	1/1:2,1:10:15.83:84,16,0	0/0:22,0:11:6.67:0,7,144	0/1:18,0:9:13.65:14,0,93	0/0:18,0:19:20.45:0,20,211	0/0:14,0:15:35.68:0,36,302	0/0:13,0:13:23.89:0,24,208	1/1:13,12:26:15.68:474,16,0	0/0:16,0:16:44.73:0,45,378	1/1:5,0:14:19.84:69,20,0	0/1:6,1:13:0.29:109,0,0	0/0:21,0:23:50.38:0,50,420	0/0:10,0:8:14.81:0,15,117	0/0:13,0:14:21.54:0,22,216	0/0:15,0:15:26.63:0,27,233	0/0:15,0:13:22.74:0,23,176	0/1:10,2:32:1.04:168,0,1	0/0:26,0:22:41.99:0,42,370	1/1:9,7:12:23.56:285,24,0	1/1:6,13:20:39.09:507,39,0	1/1:7,8:14:25.02:312,25,0	0/0:12,0:11:14.89:0,15,132	0/0:7,0:7:8.36:0,8,61	0/0:22,0:24:29.69:0,30,353	0/0:14,0:13:26.88:0,27,237	1/1:9,8:18:27.08:342,27,0	1/1:4,14:19:41.51:485,42,0	1/1:5,4:11:23.55:257,24,0
chr10	86541228	.	ATC	A	516.24	PASS	AB=0.816;AC=16;AF=0.296;AN=54;BaseQRankSum=4.325;DP=217;FS=3.233;HRun=0;HaplotypeScore=38.9414;InbreedingCoeff=-0.4728;MQ=56.13;MQ0=2;MQRankSum=-5.121;QD=3.58;ReadPosRankSum=4.298;VQSLOD=1.2795;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:12:35.33:35,0,264	0/0:2,0:2:6:0,6,71	0/0:10,0:6:2.94:0,3,147	0/0:8,0:6:8.46:0,8,116	0/1:13,4:17:99:104,0,326	0/1:4,1:5:24.83:25,0,103	0/1:2,1:3:29.66:30,0,77	0/1:4,0:7:66.50:67,0,130	0/1:5,1:6:21.34:21,0,198	0/1:8,0:9:13.56:14,0,185	0/0:10,0:10:23.62:0,24,223	0/0:7,0:7:21.05:0,21,288	0/1:9,3:12:86.11:86,0,215	0/1:4,1:4:29.69:30,0,70	0/1:8,1:9:13.04:13,0,277	0/1:5,2:7:59.16:59,0,192	0/1:5,0:6:47.88:52,0,48	0/1:6,1:7:27.72:28,0,167	0/1:8,0:11:12.59:13,0,267	0/1:13,0:15:30:30,0,459	0/0:1,0:1:3.01:0,3,42	0/0:7,0:7:12.59:0,13,147	0/0:9,0:8:18.06:0,18,283	0/0:9,0:9:11.79:0,12,148	0/1:7,2:8:59.98:60,0,186	0/0:3,0:3:9.02:0,9,117	0/0:6,0:6:4.94:0,5,173	./.
chr10	86542807	.	TC	T	713.12	PASS	AB=0.778;AC=11;AF=0.212;AN=52;BaseQRankSum=4.292;DP=297;FS=8.656;HRun=2;HaplotypeScore=34.1175;InbreedingCoeff=0.7826;MQ=42.08;MQ0=32;MQRankSum=-4.526;QD=17.39;ReadPosRankSum=0.011;VQSLOD=2.7479;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:16:38.92:0,39,435	0/0:8,0:8:18:0,18,217	0/0:13,0:4:8.99:0,9,92	./.	0/0:10,0:9:18.01:0,18,201	0/0:14,0:11:27.09:0,27,385	0/0:16,0:13:20.89:0,21,221	1/1:1,6:6:14.97:157,15,0	0/0:10,0:8:20.97:0,21,235	0/0:13,0:11:30.07:0,30,378	0/0:7,0:6:12.03:0,12,151	0/0:11,0:7:15.01:0,15,160	0/0:6,0:4:11.93:0,12,145	0/0:10,0:9:17.97:0,18,181	0/0:11,0:9:23.98:0,24,275	0/0:8,0:8:24.05:0,24,303	0/0:32,0:27:54.16:0,54,751	0/0:9,0:9:15.05:0,15,215	1/1:3,4:7:17.99:194,18,0	1/1:3,2:4:5.98:58,6,0	./.	0/0:9,0:8:18.05:0,18,238	0/0:7,0:5:12.04:0,12,168	0/0:16,0:14:15.03:0,15,193	0/0:6,0:4:9.03:0,9,128	0/1:5,2:7:25.16:138,0,25	1/1:0,8:8:15.05:193,15,0	1/1:6,1:6:12.02:137,12,0
chr10	86543157	.	CTT	C	889.54	PASS	AB=0.978;AC=13;AF=0.232;AN=56;BaseQRankSum=-1.835;DP=479;FS=2.639;HRun=16;HaplotypeScore=70.2693;InbreedingCoeff=0.6686;MQ=60.47;MQ0=7;MQRankSum=4.003;QD=5.78;ReadPosRankSum=4.381;VQSLOD=-0.3898;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,25:38:31.64:402,32,0	1/1:3,3:6:2.79:25,3,0	0/1:17,0:7:13.30:13,0,15	0/1:16,0:12:0.43:0,0,5	0/0:20,0:21:37.99:0,38,342	0/0:14,0:15:34.46:0,34,376	0/0:23,0:22:52.38:0,52,558	0/0:11,0:22:31.29:0,31,136	0/0:18,0:18:38.97:0,39,391	1/1:11,12:23:28.28:201,28,0	1/1:6,9:14:20.89:175,21,0	0/0:15,0:15:25.69:0,26,233	0/0:8,0:8:17.26:0,17,190	0/0:11,0:12:26.52:0,27,276	0/0:10,0:11:19.27:0,19,198	0/0:14,0:17:40.18:0,40,416	1/1:13,10:22:20.64:232,21,0	0/0:16,0:21:32.44:0,32,189	0/0:11,0:24:25.55:0,26,133	0/0:12,0:14:20.27:0,20,147	0/0:4,0:4:4.41:0,4,15	0/0:15,0:15:31.18:0,31,326	0/0:20,0:19:25.63:0,26,231	0/0:20,0:21:32.35:0,32,339	0/0:12,0:12:16.99:0,17,195	0/0:18,0:19:22.59:0,23,96	0/1:13,1:13:10.35:10,0,53	0/0:11,0:10:2.68:0,3,11
chr10	86543466	.	TACA	T	3582.11	PASS	AB=0.560;AC=13;AF=0.232;AN=56;BaseQRankSum=10.442;DP=457;FS=0.468;HRun=0;HaplotypeScore=68.3862;InbreedingCoeff=0.8790;MQ=73.73;MQ0=0;MQRankSum=-1.127;QD=34.78;ReadPosRankSum=-0.431;VQSLOD=3.8571;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.18:0,63,1281	0/0:2,0:2:6.01:0,6,90	0/0:22,0:22:57.07:0,57,988	0/0:14,0:14:29.03:0,29,498	0/0:19,0:19:48.16:0,48,1022	0/0:22,0:22:63.09:0,63,1147	0/0:18,0:18:54.17:0,54,1018	1/1:2,14:16:42.11:592,42,0	0/0:16,0:16:45.15:0,45,895	0/0:19,0:19:54.12:0,54,940	0/0:14,0:14:30.10:0,30,649	0/0:21,0:21:60.19:0,60,1219	0/0:15,0:15:45.14:0,45,934	0/0:15,0:15:39.13:0,39,839	0/0:18,0:18:54.19:0,54,1169	0/0:23,0:23:66.23:0,66,1391	0/0:13,0:13:39.13:0,39,844	0/0:14,0:14:42.14:0,42,884	1/1:1,14:15:42.14:653,42,0	1/1:2,11:13:27.03:360,27,0	1/1:1,19:20:42.07:594,42,0	0/0:14,0:14:36.12:0,36,739	0/0:18,0:18:48.14:0,48,901	0/0:21,0:21:57.20:0,57,1213	0/0:14,0:14:39:0,39,696	0/1:3,11:14:28.82:452,0,29	1/1:3,15:18:42.14:649,42,0	1/1:0,7:7:18.06:281,18,0
chr10	86544324	.	T	TA	1595.69	PASS	AB=0.958;AC=12;AF=0.214;AN=56;BaseQRankSum=-8.473;DP=501;FS=13.491;HRun=12;HaplotypeScore=50.0716;InbreedingCoeff=0.7831;MQ=71.64;MQ0=0;MQRankSum=1.276;QD=13.08;ReadPosRankSum=0.427;VQSLOD=2.1907;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:26.17:416,26,0	1/1:2,9:11:24.04:234,24,0	0/0:8,0:8:8.75:0,9,59	0/1:12,0:8:7.84:8,0,27	0/0:24,0:25:51.91:0,52,355	0/0:26,0:26:59.59:0,60,436	0/0:20,0:22:44.61:0,45,321	0/0:27,0:27:53.61:0,54,392	0/0:17,0:17:18.53:0,19,294	1/1:4,14:18:42.04:396,42,0	1/1:6,12:18:35.88:317,36,0	0/0:26,0:26:59.57:0,60,429	0/0:13,0:13:5.58:0,6,171	0/0:5,0:5:14.91:0,15,109	0/0:17,0:17:38.63:0,39,277	0/0:20,0:20:44.67:0,45,324	1/1:4,13:18:42.03:399,42,0	0/0:17,0:17:37.78:0,38,268	0/0:15,0:16:6.31:0,6,175	0/0:21,0:22:55.71:0,56,399	0/0:9,0:9:20.83:0,21,149	0/1:20,2:22:1.80:2,0,306	0/0:27,0:28:71.50:0,71,519	0/0:12,0:13:37.81:0,38,265	0/0:17,0:17:38.72:0,39,282	0/0:15,0:17:43.65:0,44,304	0/0:23,0:23:68.61:0,69,503	0/0:9,0:10:22.86:0,23,159
chr10	86545128	.	A	AGGGT	4965.79	PASS	AB=0.929;AC=46;AF=0.920;AN=50;BaseQRankSum=-4.150;DP=233;FS=1.603;HRun=0;HaplotypeScore=93.7731;InbreedingCoeff=-0.1271;MQ=43.87;MQ0=40;MQRankSum=0.958;QD=22.17;ReadPosRankSum=1.925;VQSLOD=4.3115;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,6:20:45.52:780,46,0	1/1:1,0:1:3:25,3,0	1/1:16,1:7:14.40:137,14,0	0/1:13,0:6:3.96:20,0,4	./.	./.	1/1:10,0:10:18.33:219,18,0	0/1:9,0:6:29.32:77,0,29	1/1:5,2:5:12:175,12,0	1/1:4,0:3:7.58:109,8,0	1/1:4,0:3:8.76:87,9,0	1/1:8,3:8:15.58:267,16,0	0/1:5,1:6:1.92:152,0,2	1/1:7,4:9:11.19:287,11,0	1/1:11,0:10:6.36:134,6,0	1/1:12,0:7:4.60:164,5,0	1/1:21,0:21:14.66:685,15,0	1/1:4,1:3:8.90:133,9,0	1/1:6,1:6:15.05:226,15,0	1/1:6,0:2:3:29,3,0	1/1:9,2:9:24.07:440,24,0	./.	1/1:6,0:3:9.03:111,9,0	1/1:12,0:8:20.28:294,20,0	1/1:4,1:4:12.04:229,12,0	0/1:5,1:5:19.35:60,0,19	1/1:3,0:1:3.01:36,3,0	1/1:2,0:2:6.02:92,6,0
chr10	86545136	.	AG	A	2684.61	PASS	AC=40;AF=1.000;AN=40;DP=194;FS=0.000;HRun=3;HaplotypeScore=85.4889;InbreedingCoeff=0.0051;MQ=35.42;MQ0=51;QD=15.98;VQSLOD=3.1909;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,10:16:33.06:369,33,0	./.	1/1:11,1:2:2.98:21,3,0	./.	./.	./.	1/1:7,3:9:18.05:209,18,0	1/1:7,1:2:2.98:22,3,0	1/1:2,4:4:6.02:71,6,0	1/1:1,0:1:2.37:8,2,0	1/1:3,1:3:5.69:48,6,0	1/1:4,5:6:14.99:157,15,0	1/1:2,3:5:15.04:169,15,0	1/1:4,6:8:21.06:236,21,0	1/1:5,1:5:9.02:100,9,0	1/1:6,3:4:8.98:86,9,0	1/1:17,4:19:46.64:409,47,0	1/1:2,3:3:6.02:69,6,0	1/1:3,4:6:15.05:181,15,0	1/1:6,0:2:3.01:30,3,0	1/1:5,4:7:18.01:195,18,0	./.	./.	1/1:5,7:7:17.97:195,18,0	1/1:1,2:2:6.02:70,6,0	1/1:4,1:4:11.99:115,12,0	./.	./.
chr10	86545137	.	GGGAAA	G	3755.02	PASS	AC=40;AF=1.000;AN=40;DP=192;FS=0.000;HRun=0;HaplotypeScore=89.7479;InbreedingCoeff=-0.0567;MQ=35.07;MQ0=52;QD=22.62;VQSLOD=3.2993;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,2:16:35.96:370,36,0	./.	1/1:12,0:2:2.98:21,3,0	./.	./.	./.	1/1:9,1:9:21.03:306,21,0	1/1:8,0:2:3.01:39,3,0	1/1:5,1:4:6.48:57,6,0	1/1:1,0:1:2.96:19,3,0	1/1:3,1:3:5.99:88,6,0	1/1:8,1:5:15.04:200,15,0	1/1:5,0:5:15.04:225,15,0	1/1:10,0:8:21.02:257,21,0	1/1:4,1:4:9.03:164,9,0	1/1:6,2:3:8.99:127,9,0	1/1:10,7:19:48.15:817,48,0	1/1:5,0:3:6.02:87,6,0	1/1:7,1:6:15.05:217,15,0	1/1:0,6:2:3.01:66,3,0	1/1:5,0:6:17.98:160,18,0	./.	./.	1/1:9,2:7:17.98:292,18,0	1/1:2,1:2:6.01:83,6,0	1/1:5,0:4:12.04:160,12,0	./.	./.
chr10	86545139	.	GAAAGA	G	2669.51	PASS	AB=1.000;AC=39;AF=0.975;AN=40;BaseQRankSum=1.902;DP=178;FS=0.000;HRun=0;HaplotypeScore=98.6683;InbreedingCoeff=0.1149;MQ=34.82;MQ0=53;MQRankSum=0.370;QD=17.22;ReadPosRankSum=-0.233;VQSLOD=3.0058;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:12:24.49:134,24,0	./.	0/1:12,0:2:0.01:0,0,0	./.	./.	./.	1/1:6,3:8:14.22:273,14,0	1/1:6,1:1:3.01:49,3,0	1/1:6,0:4:8.05:39,8,0	1/1:0,0:1:3:29,3,0	1/1:2,0:2:4.57:50,5,0	1/1:7,2:5:13.47:161,13,0	1/1:3,2:5:14.06:204,14,0	1/1:6,3:7:18.09:221,18,0	1/1:3,2:4:9.03:172,9,0	1/1:6,1:2:6.02:95,6,0	1/1:18,0:19:50.07:580,50,0	1/1:4,0:3:6.02:98,6,0	1/1:7,0:5:14.70:158,15,0	1/1:6,0:2:3.01:46,3,0	1/1:8,0:6:12.77:55,13,0	./.	./.	1/1:12,0:7:15:178,15,0	1/1:3,0:2:5.23:43,5,0	1/1:2,2:4:11.63:159,12,0	./.	./.
chr10	86545153	.	AG	A	3122.34	PASS	AC=42;AF=1.000;AN=42;BaseQRankSum=1.364;DP=177;FS=0.000;HRun=3;HaplotypeScore=94.8848;InbreedingCoeff=-0.0600;MQ=22.84;MQ0=52;MQRankSum=-1.315;QD=20.82;ReadPosRankSum=1.726;VQSLOD=3.0625;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,8:12:34.28:368,34,0	./.	./.	./.	./.	1/1:0,2:2:5.98:57,6,0	1/1:6,4:9:14.44:242,14,0	1/1:6,2:3:9.03:111,9,0	1/1:2,3:3:8.97:91,9,0	1/1:1,0:1:3.01:34,3,0	1/1:2,0:2:5.98:57,6,0	1/1:4,5:6:18.05:212,18,0	1/1:2,3:5:15.04:169,15,0	1/1:3,6:9:27.08:313,27,0	1/1:3,2:4:12.04:140,12,0	1/1:4,4:5:15.04:174,15,0	1/1:19,1:17:36.81:324,37,0	1/1:3,2:3:8.51:80,9,0	1/1:3,5:6:18.06:218,18,0	1/1:6,0:2:3.01:30,3,0	1/1:4,2:5:15.04:173,15,0	./.	./.	1/1:7,4:5:9.03:104,9,0	1/1:1,1:1:3.01:34,3,0	1/1:4,4:7:21:233,21,0	1/1:2,1:1:3.01:33,3,0	./.
chr10	86545154	.	GGGAAA	G	3492.74	PASS	AB=1.000;AC=41;AF=0.976;AN=42;BaseQRankSum=1.301;DP=188;FS=0.000;HRun=0;HaplotypeScore=109.2097;InbreedingCoeff=-0.0212;MQ=23.19;MQ0=53;MQRankSum=-0.277;QD=21.83;ReadPosRankSum=1.273;VQSLOD=3.1031;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:12:30.04:189,30,0	./.	./.	./.	./.	1/1:3,0:3:8.99:97,9,0	1/1:7,3:9:12.83:290,13,0	1/1:10,1:6:14.96:164,15,0	1/1:5,0:4:5.08:64,5,0	1/1:0,1:1:3.01:47,3,0	1/1:1,0:2:5.75:43,6,0	1/1:8,2:7:20.28:241,20,0	1/1:4,2:6:17.48:238,17,0	1/1:7,3:10:28.06:310,28,0	1/1:2,3:4:12.04:219,12,0	1/1:9,1:7:20.98:304,21,0	1/1:18,0:17:31.82:291,32,0	0/1:4,0:3:0.54:78,0,1	1/1:8,1:7:20.84:238,21,0	1/1:5,0:1:3.01:49,3,0	1/1:6,0:5:13.97:98,14,0	./.	./.	1/1:11,0:5:9.03:140,9,0	1/1:2,0:1:2.50:9,2,0	1/1:5,3:7:20.86:330,21,0	1/1:3,0:1:3.01:53,3,0	./.
chr10	86545156	.	GA	G	1474.08	PASS	AB=0.960;AC=36;AF=0.857;AN=42;BaseQRankSum=5.234;DP=194;FS=0.000;HRun=3;HaplotypeScore=112.7811;InbreedingCoeff=-0.2028;MQ=23.21;MQ0=55;MQRankSum=0.080;QD=8.88;ReadPosRankSum=5.682;VQSLOD=0.8508;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,1:12:32.08:166,32,0	./.	./.	./.	./.	0/1:3,0:3:9.74:10,0,14	1/1:12,0:10:1.24:89,1,0	0/1:11,0:6:23.55:34,0,24	0/1:6,0:4:8.24:25,0,8	1/1:1,0:1:2.98:21,3,0	1/1:1,1:2:5.93:54,6,0	1/1:9,1:7:1.38:73,1,0	0/1:6,0:6:1.40:60,0,1	1/1:10,0:10:9.33:119,9,0	1/1:5,0:4:11.33:57,11,0	0/1:12,1:10:45.41:45,0,51	1/1:12,9:17:41.80:425,42,0	0/1:4,1:3:2.73:19,0,3	1/1:9,0:7:0.71:71,1,0	1/1:1,4:1:3.01:36,3,0	1/1:6,0:5:14.41:77,14,0	./.	./.	1/1:8,3:5:8.89:69,9,0	1/1:1,1:1:2.84:14,3,0	1/1:9,0:7:20.08:104,20,0	1/1:2,0:1:2.74:12,3,0	./.
chr10	86545157	.	A	AGG	1076.24	PASS	AB=1.000;AC=28;AF=0.667;AN=42;BaseQRankSum=2.843;DP=187;FS=0.000;HRun=3;HaplotypeScore=142.3680;InbreedingCoeff=0.0169;MQ=23.53;MQ0=51;MQRankSum=-0.331;QD=6.99;ReadPosRankSum=4.978;VQSLOD=0.1858;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,4:12:35.32:273,35,0	./.	./.	./.	./.	0/0:3,0:3:5.21:0,5,31	0/1:11,0:9:18.91:43,0,19	0/1:11,0:6:13.75:14,0,32	1/1:5,0:4:8.72:60,9,0	1/1:1,0:1:2.74:12,3,0	0/0:2,0:2:5.49:0,5,24	1/1:10,0:7:10.70:102,11,0	1/1:6,0:6:10.15:77,10,0	0/1:10,0:10:2.71:116,0,3	0/1:5,0:4:3.41:28,0,3	0/1:12,0:10:8.21:8,0,24	0/1:21,0:17:11.30:107,0,11	1/1:5,0:3:8.97:70,9,0	0/1:9,0:7:8.37:36,0,8	1/1:4,0:1:2.80:13,3,0	1/1:3,3:5:14.93:117,15,0	./.	./.	1/1:11,0:5:7.65:58,8,0	1/1:2,0:1:2.98:22,3,0	0/1:9,0:7:8.09:52,0,8	0/0:1,0:1:2.68:0,3,11	./.
chr10	86545158	.	A	AG	37.04	PASS	AB=0.904;AC=4;AF=0.095;AN=42;BaseQRankSum=2.228;DP=188;FS=0.000;HRun=0;HaplotypeScore=120.3602;InbreedingCoeff=0.1674;MQ=23.47;MQ0=52;MQRankSum=0.055;QD=1.12;ReadPosRankSum=0.910;VQSLOD=2.3262;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:12:27.54:0,28,126	./.	./.	./.	./.	0/0:3,0:3:8.93:0,9,63	0/0:11,0:9:16.41:0,16,122	0/0:11,0:6:14.46:0,14,90	0/0:5,0:4:11.14:0,11,62	1/1:1,0:1:2.68:11,3,0	0/0:2,0:2:4.99:0,5,25	0/0:10,0:7:19.45:0,19,96	0/0:6,0:6:16.30:0,16,78	0/0:10,0:10:27.97:0,28,149	0/0:5,0:4:10.92:0,11,52	0/0:12,0:10:25.96:0,26,150	0/1:16,5:17:16.81:107,0,17	0/0:5,0:3:8.36:0,8,39	0/0:9,0:7:20.17:0,20,120	0/0:4,0:1:2.04:0,2,6	0/0:6,0:5:2.12:0,2,19	./.	./.	0/1:11,0:5:7.27:7,0,14	0/0:2,0:1:2.74:0,3,12	0/0:9,0:7:14.43:0,14,77	0/0:1,0:1:2.90:0,3,16	./.
chr10	86545159	.	A	AG	879.49	PASS	AB=0.904;AC=40;AF=0.952;AN=42;BaseQRankSum=2.652;DP=190;FS=0.000;HRun=1;HaplotypeScore=116.9180;InbreedingCoeff=0.1637;MQ=23.44;MQ0=53;MQRankSum=0.644;QD=5.46;ReadPosRankSum=2.879;VQSLOD=0.5033;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,4:12:27.70:112,28,0	./.	./.	./.	./.	1/1:3,0:3:0.33:6,0,0	1/1:10,0:8:15.68:52,16,0	1/1:11,0:6:10.45:48,10,0	1/1:5,0:4:8.55:35,9,0	1/1:1,0:1:2.88:15,3,0	0/1:2,0:2:1.36:1,0,7	1/1:10,0:7:18.27:79,18,0	1/1:7,0:7:13.65:48,14,0	1/1:10,0:10:9.62:65,10,0	1/1:6,0:5:9.78:33,10,0	1/1:12,0:10:21.09:101,21,0	0/1:16,0:17:30.06:100,0,30	1/1:5,0:3:8.27:37,8,0	1/1:9,0:7:14:50,14,0	1/1:4,0:1:2.68:11,3,0	1/1:3,3:5:14.23:82,14,0	./.	./.	1/1:11,0:5:6.85:23,7,0	1/1:2,0:1:2.68:11,3,0	1/1:9,0:7:16.16:57,16,0	1/1:1,0:1:1.82:5,2,0	./.
chr10	86545172	.	G	GAAAA	5978.34	PASS	AC=40;AF=0.952;AN=42;BaseQRankSum=1.091;DP=175;FS=0.000;HRun=0;HaplotypeScore=80.8336;InbreedingCoeff=0.1750;MQ=22.90;MQ0=63;MQRankSum=-0.930;QD=43.01;ReadPosRankSum=-0.866;VQSLOD=4.3488;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,4:9:27.09:616,27,0	./.	./.	./.	./.	1/1:4,0:4:12.04:179,12,0	1/1:9,0:7:21.07:350,21,0	1/1:8,0:6:18.06:293,18,0	1/1:6,0:5:15.05:261,15,0	1/1:1,0:1:3.01:70,3,0	1/1:1,0:1:3.01:41,3,0	1/1:12,0:10:30.10:544,30,0	1/1:6,0:6:18.05:305,18,0	1/1:11,0:11:33.11:625,33,0	1/1:5,0:5:15.05:242,15,0	1/1:12,0:11:33.11:587,33,0	1/1:7,5:7:18.06:452,18,0	1/1:2,0:2:6.02:135,6,0	1/1:9,0:7:21.07:331,21,0	./.	1/1:5,3:5:15.05:325,15,0	./.	0/0:1,0:1:0.47:0,0,1	1/1:5,0:1:3.01:34,3,0	1/1:1,0:1:3.01:69,3,0	1/1:11,0:8:24.08:446,24,0	1/1:1,0:1:3.01:73,3,0	./.
chr10	86545188	.	GT	G	481.72	PASS	AB=0.972;AC=23;AF=0.719;AN=32;BaseQRankSum=1.561;DP=175;FS=0.000;HRun=1;HaplotypeScore=90.2856;InbreedingCoeff=0.3229;MQ=21.13;MQ0=80;MQRankSum=-0.312;QD=4.82;ReadPosRankSum=-0.937;VQSLOD=-0.1553;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:7:11.87:80,12,0	./.	./.	./.	./.	1/1:4,0:4:2.97:20,3,0	1/1:10,0:7:11.81:80,12,0	0/1:3,0:2:0:0,0,0	0/0:4,0:4:0.43:0,0,1	1/1:0,1:1:3.01:39,3,0	./.	1/1:12,0:10:7.84:57,8,0	1/1:5,1:6:4.93:54,5,0	1/1:9,0:9:5.41:39,5,0	0/1:5,0:5:0:0,0,0	1/1:12,0:11:0.47:1,0,0	1/1:8,4:5:12:138,12,0	1/1:2,0:2:0.47:1,0,0	0/0:11,0:7:1.28:0,1,3	./.	./.	./.	0/0:1,0:1:0:0,0,0	./.	./.	0/1:10,1:8:2.80:50,0,3	./.	./.
chr10	86549163	.	GAGGA	G	2781.88	PASS	AB=0.960;AC=15;AF=0.288;AN=52;BaseQRankSum=4.984;DP=726;FS=10.169;HRun=0;HaplotypeScore=156.7197;InbreedingCoeff=0.7672;MQ=52.44;MQ0=24;MQRankSum=0.224;QD=12.47;ReadPosRankSum=-1.076;VQSLOD=2.3743;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:6.84:0,7,67	0/0:8,0:8:5.22:0,5,69	./.	./.	0/0:29,0:29:47.36:0,47,878	0/0:20,0:19:32.29:0,32,587	0/0:25,0:25:48.12:0,48,869	1/1:20,5:17:14.99:170,15,0	0/0:19,0:17:30.10:0,30,635	0/0:31,0:31:0.03:0,0,28	0/0:24,0:23:5.57:0,6,26	0/0:34,0:34:75.11:0,75,1463	0/0:12,0:18:15.03:0,15,202	0/1:23,1:22:5.29:5,0,745	0/0:42,0:41:78.95:0,79,1532	0/0:48,0:48:72.12:0,72,1480	0/0:18,0:18:14.16:0,14,109	0/0:13,0:13:11.85:0,12,91	1/1:14,3:13:15.05:235,15,0	1/1:18,19:36:41.39:518,41,0	1/1:27,26:51:33.11:521,33,0	0/0:32,0:32:1.81:0,2,800	0/0:27,0:27:48.14:0,48,943	0/0:38,0:38:60.17:0,60,1212	0/0:23,2:24:8.23:0,8,691	1/1:29,6:36:57.16:824,57,0	1/1:9,13:22:24.08:379,24,0	1/1:8,1:9:21.07:314,21,0
chr10	86549177	.	GGAAGGAAGGAAGGAAGGAAGGAAGGGAAA	G	4136.20	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=4.859;DP=747;FS=10.472;HRun=0;HaplotypeScore=504.1005;InbreedingCoeff=0.7001;MQ=51.28;MQ0=28;MQRankSum=-2.476;QD=35.05;ReadPosRankSum=-2.238;VQSLOD=0.0015;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:99:917,0,183	1/1:11,0:11:33.11:949,33,0	0/0:4,0:3:3.01:0,3,84	0/0:7,0:3:6.02:0,6,141	0/0:34,0:33:78.54:0,79,4368	0/0:22,0:20:54.07:0,54,2464	0/0:24,0:24:60.21:0,60,2797	0/0:31,0:20:28.80:0,29,671	0/0:26,0:23:60.14:0,60,3168	1/1:9,18:27:40.80:944,41,0	1/1:5,21:24:18.06:384,18,0	0/0:38,0:37:96.26:0,96,5939	0/0:20,0:18:33.11:0,33,1203	0/0:25,0:23:60.15:0,60,3521	0/0:40,0:39:96.29:0,96,5833	0/0:42,0:42:99:0,99,5426	1/1:14,0:14:21.07:552,21,0	0/1:14,0:14:99:391,0,122	0/0:17,0:13:27.09:0,27,1212	0/0:38,0:37:87.16:0,87,3177	0/0:55,0:53:70.10:0,70,3054	0/0:34,0:33:90.31:0,90,4866	0/0:25,0:23:60.21:0,60,4772	0/0:41,0:41:99:0,102,5612	0/0:28,0:27:70.41:0,70,3608	0/0:38,0:38:88.06:0,88,3659	0/0:22,0:22:42.11:0,42,2400	0/0:18,0:18:48.16:0,48,2360
chr10	86549188	.	A	AG	814.43	PASS	AB=0.886;AC=6;AF=0.107;AN=56;BaseQRankSum=5.017;DP=718;FS=2.494;HRun=2;HaplotypeScore=123.8224;InbreedingCoeff=-0.1265;MQ=50.44;MQ0=31;MQRankSum=-0.336;QD=7.98;ReadPosRankSum=-1.438;VQSLOD=0.6157;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:22,3:24:96.86:97,0,270	0/1:10,4:14:99:136,0,114	0/0:4,0:1:3.01:0,3,37	0/0:8,0:3:9.03:0,9,111	0/0:37,0:36:87.53:0,88,1022	0/0:21,0:20:57.01:0,57,636	0/0:23,0:23:60.19:0,60,743	0/0:26,0:15:44.99:0,45,498	0/0:25,0:24:63.13:0,63,759	0/1:18,0:18:23.66:251,0,24	0/1:23,0:21:22.06:143,0,22	0/0:38,0:37:99:0,102,1232	0/0:23,0:22:37.40:0,37,430	0/0:24,0:24:62.97:0,63,738	0/0:42,0:41:99:0,105,1266	0/0:42,0:42:99:0,102,1242	0/1:4,5:9:38.84:185,0,39	0/1:13,0:13:99:127,0,167	0/0:18,0:13:38.28:0,38,349	0/0:36,0:35:89.48:0,89,897	0/0:51,0:48:73.29:0,73,643	0/0:32,0:31:90.15:0,90,1092	0/0:26,0:24:69.22:0,69,855	0/0:37,0:37:99:0,102,1261	0/0:28,0:27:69.17:0,69,827	0/0:32,0:32:90.84:0,91,731	0/0:22,0:22:43.73:0,44,340	0/0:21,0:18:50.24:0,50,451
chr10	86549200	.	AG	A	1226.16	PASS	AB=0.632;AC=11;AF=0.196;AN=56;BaseQRankSum=9.194;DP=679;FS=11.353;HRun=3;HaplotypeScore=103.2031;InbreedingCoeff=0.8012;MQ=48.93;MQ0=39;MQRankSum=-4.133;QD=13.04;ReadPosRankSum=-1.369;VQSLOD=1.3401;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:18:36.02:394,36,0	1/1:2,11:13:30.09:355,30,0	0/0:8,0:1:3.01:0,3,42	0/0:11,0:3:9.03:0,9,126	0/0:42,0:41:89.98:0,90,1250	0/0:18,0:17:48.15:0,48,669	0/0:23,0:23:60.20:0,60,851	0/0:30,0:19:55.77:0,56,653	0/0:25,0:24:54.18:0,54,761	1/1:19,0:19:23.99:270,24,0	1/1:22,0:21:6.49:75,6,0	0/0:37,0:36:93.18:0,93,1261	0/0:21,0:19:32.91:0,33,425	0/0:22,0:22:59.16:0,59,782	0/0:39,0:38:96.31:0,96,1349	0/0:33,0:33:69.21:0,69,972	1/1:5,3:8:9.03:110,9,0	0/1:5,7:11:19.58:193,0,20	0/0:14,0:10:25.24:0,25,239	0/0:29,0:29:75.96:0,76,742	0/0:41,1:38:13.33:0,13,362	0/0:30,0:29:67.92:0,68,939	0/0:29,0:27:63.21:0,63,901	0/0:35,0:35:84.24:0,84,1171	0/0:25,0:25:63.10:0,63,872	0/0:28,0:28:59.13:0,59,416	0/0:24,0:24:36.71:0,37,334	0/0:20,0:17:45.06:0,45,432
chr10	86553717	.	G	GATC	720.83	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.951;DP=633;FS=2.426;HRun=0;HaplotypeScore=87.6733;InbreedingCoeff=0.9981;MQ=86.21;MQ0=0;MQRankSum=-2.495;QD=51.49;ReadPosRankSum=1.602;VQSLOD=5.7835;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,114,1760	0/0:9,0:9:27.09:0,27,445	0/0:22,0:22:54.17:0,54,847	0/0:25,0:25:66.19:0,66,1028	0/0:18,0:18:45.14:0,45,724	0/0:26,0:26:75.24:0,75,1218	0/0:31,0:31:90.29:0,90,1470	0/0:31,0:31:81.27:0,81,1321	0/0:23,0:23:66.23:0,66,1089	0/0:21,0:21:54.18:0,54,876	0/0:10,0:10:30.10:0,30,492	0/0:21,0:21:60.19:0,60,969	0/0:18,0:18:51.17:0,51,849	0/0:16,0:16:45.15:0,45,748	0/0:28,0:28:84.26:0,84,1341	0/0:17,0:17:51.17:0,51,845	0/0:43,0:43:99:0,126,2099	1/1:0,13:14:36.12:816,36,0	0/0:20,0:20:57.19:0,57,925	0/0:21,0:21:60.19:0,60,967	0/0:37,0:37:99:0,111,1824	0/0:22,0:22:63.22:0,63,1048	0/0:14,0:14:36.12:0,36,600	0/0:24,0:24:72.19:0,72,1144	0/0:24,0:24:72.25:0,72,1197	0/0:21,0:21:63.20:0,63,1023	0/0:23,0:23:66.23:0,66,1099	0/0:12,0:12:36.12:0,36,599
chr10	86554261	.	ACAC	A	486.79	PASS	AB=0.928;AC=9;AF=0.161;AN=56;BaseQRankSum=6.295;DP=383;FS=50.172;HRun=0;HaplotypeScore=69.1204;InbreedingCoeff=0.3646;MQ=73.59;MQ0=2;MQRankSum=-0.139;QD=5.60;ReadPosRankSum=7.170;VQSLOD=-0.1333;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:52.93:0,53,474	0/1:13,1:14:43.63:85,0,44	0/0:19,0:12:29.62:0,30,315	0/1:9,0:8:0.02:0,0,156	0/1:9,0:9:1.69:2,0,116	0/0:15,0:15:30.05:0,30,438	0/0:19,0:19:49.06:0,49,442	0/0:20,0:20:47.51:0,48,427	0/0:6,0:6:17.92:0,18,186	0/1:8,4:12:47.46:169,0,47	1/1:3,1:4:8.70:84,9,0	0/0:14,0:14:30.02:0,30,449	0/0:11,0:12:26.81:0,27,343	0/0:13,0:13:39.06:0,39,623	0/0:24,0:24:62.50:0,63,820	0/0:9,0:9:21.69:0,22,206	1/1:13,4:17:21.05:270,21,0	0/1:21,0:22:11.60:12,0,57	0/0:12,0:12:7.98:0,8,251	0/0:11,0:11:21.20:0,21,286	0/0:25,0:25:62.70:0,63,630	0/0:9,0:9:23.41:0,23,275	0/0:6,0:6:15.01:0,15,194	0/0:22,0:22:57.14:0,57,957	0/0:12,0:12:29.18:0,29,411	0/0:7,0:7:14.86:0,15,151	0/0:7,0:7:13.77:0,14,85	0/0:12,0:12:26.90:0,27,231
chr10	86556701	.	C	CA	1267.22	PASS	AB=0.920;AC=22;AF=0.393;AN=56;BaseQRankSum=4.256;DP=656;FS=1.409;HRun=15;HaplotypeScore=99.0485;InbreedingCoeff=0.0041;MQ=74.74;MQ0=4;MQRankSum=-2.234;QD=2.88;ReadPosRankSum=-3.154;VQSLOD=-0.1220;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:9.40:9,0,128	1/1:7,6:15:3.42:182,3,0	0/1:36,0:21:26.82:27,0,39	0/0:24,1:16:0.27:0,0,5	0/1:30,2:33:10.73:11,0,252	0/1:21,7:31:21.79:22,0,190	0/0:18,1:21:20.77:0,21,168	0/1:41,1:46:93.38:93,0,196	0/0:19,0:19:28.21:0,28,163	1/1:5,5:11:18.60:129,19,0	1/1:17,5:24:17:234,17,0	0/1:15,7:22:14.34:38,0,14	0/0:19,0:20:0.81:0,1,86	0/1:20,0:20:36.93:37,0,63	0/1:18,1:20:12.68:13,0,118	0/1:16,7:23:15.59:16,0,135	1/1:21,9:30:30.63:343,31,0	1/1:17,1:20:25.92:190,26,0	0/1:29,1:33:8.58:9,0,193	0/0:18,1:22:18.22:0,18,198	0/1:13,0:15:23.48:23,0,74	0/0:22,0:22:16.76:0,17,196	0/0:16,0:17:29.70:0,30,170	0/0:13,3:16:3.14:0,3,124	0/0:14,0:14:12.60:0,13,165	0/1:17,3:21:64.27:64,0,128	0/0:24,0:26:40.50:0,40,249	0/0:10,2:13:3.33:0,3,122
chr10	86556717	.	C	CA	2931.39	PASS	AB=0.962;AC=14;AF=0.250;AN=56;BaseQRankSum=3.418;DP=690;FS=0.000;HRun=15;HaplotypeScore=82.6289;InbreedingCoeff=0.8104;MQ=71.82;MQ0=5;MQRankSum=1.441;QD=14.23;ReadPosRankSum=-0.401;VQSLOD=3.1993;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,28:36:50.86:551,51,0	1/1:4,12:16:41.84:437,42,0	0/0:42,0:21:23.80:0,24,277	0/1:24,0:15:17.93:18,0,41	0/0:32,0:32:69.50:0,70,702	0/0:33,0:33:78.06:0,78,728	0/0:20,0:20:56.54:0,57,492	0/0:46,0:46:81.56:0,82,886	0/0:17,0:17:47.93:0,48,433	1/1:4,17:21:54.07:599,54,0	1/1:8,18:26:50.45:515,50,0	0/0:18,0:18:26.21:0,26,231	0/0:17,0:17:42:0,42,396	0/0:19,0:19:51.03:0,51,480	0/0:17,0:17:44.41:0,44,401	0/0:26,0:26:53.97:0,54,492	1/1:1,35:38:62.77:718,63,0	1/1:5,13:18:24.47:264,24,0	0/0:37,0:37:89.46:0,89,824	0/0:26,0:26:70.98:0,71,635	0/0:13,0:13:32.79:0,33,284	0/0:22,0:22:56.02:0,56,521	0/0:17,0:17:35.70:0,36,337	0/0:21,0:21:50.93:0,51,468	0/0:18,0:18:43.44:0,43,386	0/1:24,1:24:22.10:22,0,365	0/0:29,0:29:77.85:0,78,712	0/0:14,0:14:38.97:0,39,353
chr10	86557699	.	CT	C	1232.48	PASS	AB=0.858;AC=13;AF=0.232;AN=56;BaseQRankSum=4.210;DP=559;FS=0.448;HRun=13;HaplotypeScore=70.2472;InbreedingCoeff=0.5667;MQ=60.09;MQ0=5;MQRankSum=-0.393;QD=7.04;ReadPosRankSum=2.677;VQSLOD=2.5467;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,24:35:21.71:447,22,0	1/1:1,7:8:11.79:87,12,0	0/0:16,0:10:20.54:0,21,143	0/1:15,0:8:2.50:2,0,92	0/0:26,1:28:31.98:0,32,445	0/0:19,1:19:16.95:0,17,309	0/0:20,0:20:42.21:0,42,373	0/0:36,1:36:35.01:0,35,497	0/1:13,2:16:3.87:4,0,246	1/1:9,11:21:37.61:260,38,0	0/1:7,12:19:19.28:160,0,19	0/0:19,1:21:20.11:0,20,339	0/0:11,0:11:18.03:0,18,175	0/0:18,0:18:34.40:0,34,319	0/0:27,0:26:48.55:0,49,468	0/0:17,1:18:38.97:0,39,359	1/1:8,24:35:60.68:427,61,0	0/0:10,0:16:26.11:0,26,158	0/0:19,1:21:20.54:0,21,387	0/0:12,1:15:8.40:0,8,217	0/0:19,0:20:27.41:0,27,284	0/0:15,0:16:31.81:0,32,291	0/1:10,1:12:7.69:8,0,126	0/0:21,0:21:33:0,33,311	0/0:14,0:17:24.98:0,25,254	0/0:23,1:24:20.15:0,20,341	0/0:17,0:16:26.88:0,27,247	0/1:10,1:11:1.84:2,0,110
chr10	86559838	.	T	TG	757.86	PASS	AB=0.893;AC=3;AF=0.054;AN=56;BaseQRankSum=-7.542;DP=697;FS=17.270;HRun=8;HaplotypeScore=76.0605;InbreedingCoeff=0.6627;MQ=77.12;MQ0=0;MQRankSum=-1.669;QD=13.30;ReadPosRankSum=0.667;VQSLOD=1.7624;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,117,1051	0/0:11,0:11:27.01:0,27,246	0/0:21,0:20:40.73:0,41,335	0/0:13,0:13:23.99:0,24,215	0/0:18,0:18:29.99:0,30,272	0/0:14,0:14:39.01:0,39,357	0/0:32,0:32:78.03:0,78,714	0/0:24,0:24:11.96:0,12,106	0/0:32,0:32:90.03:0,90,818	0/0:21,0:21:47.67:0,48,435	0/0:16,0:16:30:0,30,274	0/0:39,0:39:99:0,111,1016	0/0:33,0:33:81.02:0,81,741	0/0:29,0:29:69.01:0,69,631	0/0:29,0:29:81.02:0,81,737	0/0:36,0:36:90.04:0,90,824	0/0:36,0:36:99:0,102,933	1/1:3,29:32:75.19:852,75,0	0/0:21,0:21:51.02:0,51,466	0/0:17,1:18:35.99:0,36,324	0/0:49,0:49:99:0,102,1067	0/0:25,0:25:66.01:0,66,596	0/0:19,0:19:45.01:0,45,411	0/1:22,3:25:6.23:6,0,453	0/0:13,0:13:24:0,24,219	0/0:25,0:25:63:0,63,571	0/0:16,0:16:48.03:0,48,439	0/0:5,0:5:12:0,12,110
chr10	86559983	.	GCTAGGTTGTCTAACCATTGCCTTCCGT	G	336.48	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.438;DP=742;FS=2.969;HRun=0;HaplotypeScore=478.9211;InbreedingCoeff=0.6917;MQ=75.21;MQ0=0;MQRankSum=-2.433;QD=18.69;ReadPosRankSum=0.387;VQSLOD=0.2303;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:93.32:0,93,9661	0/0:12,0:12:30.10:0,30,2874	0/0:16,0:15:3:0,3,29	0/0:26,0:26:36.12:0,36,1570	0/0:20,0:20:27.09:0,27,2505	0/0:21,0:21:36.12:0,36,3625	0/0:35,0:35:72.23:0,72,6041	0/0:34,0:34:48.15:0,48,2429	0/0:28,0:28:69.22:0,69,6032	0/0:21,0:21:33.11:0,33,2175	0/0:7,0:7:18.06:0,18,1598	0/0:43,0:43:78.27:0,78,7493	0/0:36,0:36:69.24:0,69,6703	0/0:29,0:29:63.18:0,63,5328	0/0:44,0:44:78.27:0,78,8089	0/0:38,0:38:69.21:0,69,6669	0/0:30,0:30:60.21:0,60,5866	1/1:13,5:18:6.02:417,6,0	0/0:29,0:29:36.11:0,36,3572	0/0:11,0:11:24.08:0,24,2198	0/0:58,0:58:99:0,132,13383	0/0:18,0:18:30.10:0,30,2917	0/0:15,0:15:27.09:0,27,2351	0/0:27,0:27:51.16:0,51,5350	0/0:17,0:17:27.09:0,27,2977	0/0:36,0:36:54.19:0,54,4515	0/0:21,0:21:42.14:0,42,4127	0/0:3,0:3:9.03:0,9,952
chr10	86560167	.	CGCA	C	444.32	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.813;DP=687;FS=18.249;HRun=0;HaplotypeScore=99.0239;InbreedingCoeff=0.9976;MQ=75.94;MQ0=0;MQRankSum=-0.371;QD=27.77;ReadPosRankSum=1.963;VQSLOD=2.7236;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,2260	0/0:12,0:12:33.10:0,33,693	0/0:15,0:15:33.11:0,33,643	0/0:15,0:14:33.11:0,33,669	1/1:1,15:16:33.11:539,33,0	0/0:24,0:24:66.23:0,66,1474	0/0:34,0:34:87.30:0,87,1942	0/0:24,0:24:69.24:0,69,1491	0/0:26,0:26:72.25:0,72,1577	0/0:12,0:12:36.12:0,36,787	0/0:13,0:13:27.09:0,27,602	0/0:44,0:44:99:0,129,2802	0/0:23,0:23:63.18:0,63,1318	0/0:31,0:31:84.29:0,84,1838	0/0:34,0:34:90.31:0,90,1986	0/0:35,0:35:99:0,102,2148	0/0:33,0:33:99:0,99,2147	0/0:33,0:33:90.28:0,90,1947	0/0:27,0:27:78.22:0,78,1692	0/0:14,0:14:42.13:0,42,894	0/0:32,0:32:93.30:0,93,1980	0/0:22,0:22:57.18:0,57,1211	0/0:14,0:14:36.12:0,36,802	0/0:38,0:38:99:0,111,2428	0/0:13,0:13:36.11:0,36,761	0/0:22,0:22:63.21:0,63,1350	0/0:24,0:24:66.23:0,66,1466	0/0:20,0:20:54.19:0,54,1200
chr10	86560581	.	C	CTT	847.88	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=6.964;DP=716;FS=0.000;HRun=1;HaplotypeScore=116.6109;InbreedingCoeff=0.4965;MQ=62.22;MQ0=22;MQRankSum=-6.450;QD=15.14;ReadPosRankSum=-0.839;VQSLOD=0.2918;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:21:31.31:170,0,31	0/0:11,0:11:15.41:0,15,149	0/0:28,0:14:29.15:0,29,298	0/0:45,0:13:18.46:0,18,171	0/0:28,0:28:68.25:0,68,1063	0/0:28,0:28:84.08:0,84,1145	0/0:24,0:24:66.10:0,66,941	0/0:35,0:30:84.15:0,84,1107	0/0:23,0:23:69.18:0,69,983	0/0:33,0:33:79.01:0,79,788	0/0:16,0:16:15.53:0,16,198	0/0:32,0:31:79.05:0,79,1306	0/0:17,0:17:48.09:0,48,614	0/0:19,0:19:49.69:0,50,694	0/0:26,0:26:69.09:0,69,913	0/0:22,0:22:63.15:0,63,853	0/0:21,0:21:1.10:0,1,242	1/1:8,27:31:9.40:775,9,0	0/0:20,0:18:54.06:0,54,680	0/0:31,0:31:61.31:0,61,1077	0/0:24,0:24:45.76:0,46,917	0/0:14,0:13:36.11:0,36,527	0/0:30,0:29:66.37:0,66,1163	0/0:29,0:29:77.50:0,77,1081	0/0:19,0:19:33.29:0,33,691	0/0:35,0:35:56.92:0,57,1186	0/0:29,0:28:87.13:0,87,1124	0/0:20,0:20:42.06:0,42,687
chr10	86560637	.	CT	C	687.09	PASS	AB=0.894;AC=7;AF=0.125;AN=56;BaseQRankSum=9.276;DP=783;FS=0.000;HRun=3;HaplotypeScore=132.4694;InbreedingCoeff=0.5095;MQ=53.33;MQ0=21;MQRankSum=-6.403;QD=5.97;ReadPosRankSum=-0.419;VQSLOD=0.1318;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:15.28:15,0,38	0/1:13,2:15:25.97:52,0,26	0/0:35,0:6:3.15:0,3,150	0/0:23,0:7:8.31:0,8,84	0/0:21,0:21:54.17:0,54,745	0/0:27,0:26:54.28:0,54,757	0/0:24,0:22:52.03:0,52,699	0/0:40,0:38:99:0,100,1359	0/0:13,0:13:38.72:0,39,523	1/1:26,3:28:7.87:378,8,0	1/1:18,3:19:9.88:132,10,0	0/0:30,0:29:62.88:0,63,866	0/0:29,0:28:58.23:0,58,733	0/0:23,0:23:38.62:0,39,544	0/0:42,0:42:99:0,108,1428	0/0:43,0:43:99:0,107,1451	0/1:18,6:24:1.23:241,0,1	0/0:20,0:18:22.93:0,23,75	0/0:17,0:15:37.46:0,37,485	0/0:37,0:36:89.71:0,90,1157	0/0:16,0:15:42.14:0,42,605	0/0:26,0:24:56.01:0,56,781	0/0:30,0:30:81.37:0,81,1094	0/0:34,0:34:88.25:0,88,1241	0/0:32,0:32:65.88:0,66,813	0/0:44,0:43:99:0,111,1341	0/0:35,0:35:86.01:0,86,1233	0/0:27,0:27:73.94:0,74,964
chr10	86560641	.	CT	C	5169.25	PASS	AB=0.795;AC=24;AF=0.429;AN=56;BaseQRankSum=14.626;DP=794;FS=16.618;HRun=3;HaplotypeScore=115.9005;InbreedingCoeff=-0.0382;MQ=53.08;MQ0=22;MQRankSum=-14.998;QD=9.25;ReadPosRankSum=3.569;VQSLOD=1.4777;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,20:26:69.03:784,69,0	0/1:5,11:16:4.32:187,0,4	0/0:34,0:5:2.78:0,3,85	0/0:21,0:5:3.95:0,4,44	0/0:18,0:18:45.74:0,46,613	0/1:19,6:24:99:158,0,577	0/0:22,3:22:1.44:0,1,502	0/0:38,0:38:60.49:0,60,1012	0/0:14,0:13:35.14:0,35,448	1/1:6,23:28:69.18:731,69,0	1/1:6,16:20:30.50:384,31,0	0/1:22,7:28:99:146,0,727	0/1:17,13:29:99:317,0,583	0/1:16,10:26:99:204,0,438	0/1:32,11:43:99:145,0,1159	0/1:36,9:45:99:130,0,1290	1/1:19,6:25:41.65:562,42,0	1/1:5,16:18:40.89:545,41,0	0/1:14,3:15:71.72:72,0,376	0/1:30,8:36:99:163,0,870	0/0:17,0:16:45.06:0,45,584	0/1:27,3:28:38.64:39,0,771	0/1:25,4:29:61.66:62,0,882	0/0:32,1:33:44.53:0,45,1007	0/1:22,13:35:99:287,0,556	0/1:32,13:44:99:253,0,1014	0/0:33,2:35:15.91:0,16,1053	0/1:25,3:27:0.85:1,0,749
chr10	86560642	.	TTTCTTC	T	805.02	PASS	AB=1.000;AC=17;AF=0.386;AN=44;BaseQRankSum=2.751;DP=805;FS=24.383;HRun=0;HaplotypeScore=205.1121;InbreedingCoeff=0.5120;MQ=52.81;MQ0=27;MQRankSum=1.364;QD=2.76;ReadPosRankSum=-1.328;VQSLOD=0.9560;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:16,0:16:6.61:27,7,0	./.	./.	0/0:19,0:19:15.05:0,15,307	./.	0/0:25,0:22:0.89:0,1,2	./.	1/1:15,0:14:9.02:120,9,0	0/0:29,0:28:9.46:0,9,92	0/0:22,0:20:2.94:0,3,18	0/0:29,0:28:12.04:0,12,272	0/0:31,0:30:12.04:0,12,258	0/0:26,0:26:18.04:0,18,293	0/0:43,0:43:21.02:0,21,312	0/1:45,0:45:27.73:28,0,576	0/1:23,0:25:17.61:18,0,37	./.	0/0:19,0:16:5.97:0,6,56	0/1:37,0:35:7.93:141,0,8	1/1:17,0:16:6.02:95,6,0	0/0:30,0:28:27.09:0,27,642	1/1:28,0:29:6.02:82,6,0	0/0:33,0:33:15.51:0,16,376	0/0:36,0:36:23.35:0,23,392	1/1:45,0:44:12.03:162,12,0	1/1:29,5:34:3.01:58,3,0	1/1:29,0:27:12.04:232,12,0
chr10	86561774	.	TC	T	2690.08	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.667;DP=562;FS=1.870;HRun=9;HaplotypeScore=63.2139;InbreedingCoeff=0.9649;MQ=79.12;MQ0=0;MQRankSum=-0.984;QD=20.38;ReadPosRankSum=3.189;VQSLOD=4.4380;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,37:40:87.04:796,87,0	1/1:1,7:8:18.01:165,18,0	0/0:28,0:25:55.47:0,55,505	0/0:22,0:19:12.89:0,13,286	0/0:18,0:18:48.14:0,48,551	0/0:19,0:19:54.11:0,54,599	0/0:28,0:28:66.18:0,66,751	0/0:21,0:21:5.56:0,6,283	0/0:19,0:20:56.98:0,57,620	1/1:2,14:16:39:351,39,0	1/1:1,9:10:27.01:247,27,0	0/0:23,0:23:63.12:0,63,686	0/0:13,0:13:39.09:0,39,429	0/0:24,1:25:38.72:0,39,691	0/0:23,0:23:60.15:0,60,672	0/0:24,0:24:58.41:0,58,653	1/1:3,26:29:69.03:631,69,0	1/1:2,27:29:75.03:686,75,0	0/0:15,0:16:41.96:0,42,464	0/0:13,0:13:30.09:0,30,345	0/0:26,0:26:75.20:0,75,853	0/0:22,0:22:57.15:0,57,641	0/0:18,0:18:48.14:0,48,553	0/0:14,1:15:14.66:0,15,423	0/0:16,0:16:36.10:0,36,407	0/0:12,0:12:33.10:0,33,381	0/0:18,1:19:26.69:0,27,551	0/0:8,0:8:18.01:0,18,193
chr10	86562296	.	GGTGTGTGTGTGTGTGTGTGT	G	1244.01	PASS	AB=0.809;AC=9;AF=0.161;AN=56;BaseQRankSum=5.992;DP=637;FS=2.063;HRun=0;HaplotypeScore=286.9818;InbreedingCoeff=0.6342;MQ=61.78;MQ0=20;MQRankSum=-4.806;QD=11.96;ReadPosRankSum=1.088;VQSLOD=2.4044;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:34:46.33:46,0,246	1/1:0,3:4:4.26:296,4,0	0/0:28,0:16:3.01:0,3,74	0/0:22,0:13:3.01:0,3,38	0/0:16,0:16:12.04:0,12,693	0/0:27,0:26:54.19:0,54,3455	0/0:34,0:34:48.13:0,48,2438	0/0:27,0:27:18.06:0,18,607	0/0:16,0:17:24.08:0,24,1297	1/1:11,7:17:8.52:385,9,0	1/1:11,3:14:6.02:319,6,0	0/0:29,0:28:33.11:0,33,1952	0/0:19,0:19:28.04:0,28,1892	0/0:13,0:15:24.08:0,24,951	0/0:20,0:20:12.04:0,12,884	0/0:26,0:25:51.18:0,51,3458	1/1:28,2:27:19.06:342,19,0	0/0:29,0:29:30.06:0,30,1786	0/0:13,0:13:6.02:0,6,318	0/0:6,0:6:12.04:0,12,734	0/0:70,0:68:78.74:0,79,4023	0/0:18,0:16:21.06:0,21,1113	0/0:9,0:11:15.05:0,15,718	0/0:37,0:38:69.24:0,69,5140	0/0:13,0:13:18.06:0,18,509	0/0:25,0:25:33.11:0,33,2075	0/0:21,0:21:21.07:0,21,1170	0/0:5,0:5:6.02:0,6,418
chr10	86562327	.	GT	G	131.56	PASS	AB=0.879;AC=4;AF=0.071;AN=56;BaseQRankSum=7.126;DP=640;FS=4.804;HRun=1;HaplotypeScore=82.9501;InbreedingCoeff=0.3236;MQ=50.34;MQ0=37;MQRankSum=-5.325;QD=2.48;ReadPosRankSum=2.970;VQSLOD=-0.3898;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:34:31.76:0,32,445	0/0:8,0:7:2.23:0,2,89	0/0:36,0:6:18.05:0,18,219	0/0:37,0:10:21.53:0,22,262	0/0:13,0:12:24.08:0,24,324	0/0:28,0:27:66.86:0,67,838	0/0:27,0:26:60.06:0,60,754	0/0:25,0:23:66.63:0,67,824	0/0:25,0:25:53.51:0,54,672	0/1:12,1:12:54.35:54,0,162	1/1:6,0:5:5.92:52,6,0	0/0:23,0:22:58.88:0,59,716	0/0:16,0:16:43:0,43,538	0/0:21,0:19:44.32:0,44,529	0/0:18,0:18:32.91:0,33,420	0/0:31,0:29:74.93:0,75,1024	0/1:27,7:31:99:131,0,475	0/0:22,0:21:54.53:0,55,679	0/0:7,0:7:19.30:0,19,231	0/0:13,0:13:36.12:0,36,473	0/0:75,0:72:99:0,158,1961	0/0:15,0:13:24.07:0,24,311	0/0:12,0:12:26.12:0,26,307	0/0:44,0:42:99:0,110,1463	0/0:15,0:15:33.11:0,33,416	0/0:19,0:20:57.47:0,57,718	0/0:12,0:11:33.10:0,33,430	0/0:5,0:5:15.05:0,15,206
chr10	86564472	.	TG	T	4371.53	PASS	AB=0.989;AC=53;AF=0.946;AN=56;BaseQRankSum=-3.952;DP=525;FS=1.302;HRun=4;HaplotypeScore=112.0173;InbreedingCoeff=0.0607;MQ=75.33;MQ0=19;MQRankSum=-0.263;QD=8.33;ReadPosRankSum=1.510;VQSLOD=1.5779;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:13.77:75,14,0	1/1:5,0:5:8.32:43,8,0	0/1:59,2:25:17.46:17,0,283	0/1:42,0:21:5.66:6,0,122	0/1:27,0:27:3.71:123,0,4	1/1:16,0:16:11.72:197,12,0	1/1:10,1:10:27.50:164,28,0	1/1:16,20:36:31.93:428,32,0	1/1:17,0:17:20.24:158,20,0	1/1:15,0:15:29.85:176,30,0	1/1:15,0:14:28.91:149,29,0	1/1:15,0:15:37.76:219,38,0	1/1:12,0:12:9.82:75,10,0	1/1:17,0:17:33.51:271,34,0	1/1:18,0:18:42.73:282,43,0	1/1:13,0:12:8.59:41,9,0	1/1:17,0:17:22.52:120,23,0	1/1:15,0:15:8.04:34,8,0	1/1:15,0:13:16.87:176,17,0	1/1:15,0:15:15.11:122,15,0	1/1:12,0:11:9.57:116,10,0	1/1:18,0:18:19.27:158,19,0	1/1:18,0:18:13.89:185,14,0	1/1:15,0:14:30.87:204,31,0	1/1:13,0:13:30.85:222,31,0	1/1:13,0:13:21.46:160,21,0	1/1:18,0:18:25.38:236,25,0	1/1:21,0:18:39.37:215,39,0
chr10	86564856	.	T	TGG	2726.18	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=6.272;DP=580;FS=0.000;HRun=1;HaplotypeScore=102.9954;InbreedingCoeff=0.8188;MQ=69.53;MQ0=8;MQRankSum=-6.207;QD=20.34;ReadPosRankSum=-0.184;VQSLOD=1.2052;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:13:1.16:19,1,0	1/1:8,5:13:26.90:441,27,0	0/1:44,0:13:3.52:4,0,314	0/0:42,0:20:1.81:0,2,151	0/0:19,0:19:45.07:0,45,602	0/0:15,0:15:36.10:0,36,526	0/0:8,0:8:18.04:0,18,237	0/0:34,0:34:93.11:0,93,1317	0/0:13,0:13:30.08:0,30,400	1/1:18,6:23:52.96:924,53,0	1/1:10,10:20:54.06:877,54,0	0/0:17,0:17:51.17:0,51,750	0/0:21,0:21:57.19:0,57,855	0/0:20,0:20:54.18:0,54,820	0/0:10,0:10:24.08:0,24,363	0/0:18,0:18:45.12:0,45,630	1/1:12,8:17:34.82:626,35,0	0/0:24,0:24:34.79:0,35,174	0/0:28,0:28:66.19:0,66,958	0/0:22,0:22:54.17:0,54,783	0/0:8,0:7:21.07:0,21,320	0/0:17,0:16:45.03:0,45,600	0/0:26,0:26:78.19:0,78,1113	0/0:8,0:8:18.06:0,18,261	0/0:26,0:26:66.19:0,66,923	0/0:22,0:22:40.19:0,40,789	0/0:20,0:20:45.15:0,45,678	0/0:26,0:27:69.21:0,69,972
chr10	86564868	.	TTG	T	778.95	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=8.001;DP=647;FS=5.890;HRun=0;HaplotypeScore=108.6479;InbreedingCoeff=0.4766;MQ=65.01;MQ0=12;MQRankSum=-2.620;QD=4.99;ReadPosRankSum=-0.878;VQSLOD=2.1062;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,11:18:20.77:174,21,0	0/0:11,0:11:9.44:0,9,57	0/1:70,0:19:48.68:49,0,161	0/0:53,0:21:12.98:0,13,159	0/0:21,0:21:60.02:0,60,713	0/0:17,0:17:42.59:0,43,662	0/0:11,0:11:30.51:0,31,384	0/0:31,0:31:85.73:0,86,1252	0/0:16,0:16:43.92:0,44,600	0/1:24,0:23:58.27:63,0,58	0/0:22,0:22:14.72:0,15,121	0/0:18,0:18:53.87:0,54,727	0/0:28,0:28:79.49:0,79,1030	0/0:24,0:24:47.45:0,47,877	0/0:13,0:13:39.06:0,39,486	0/0:19,0:19:39.14:0,39,705	0/1:20,0:17:26.91:43,0,27	1/1:1,23:24:45.12:592,45,0	0/0:20,1:21:50.25:0,50,795	0/0:25,0:24:50.05:0,50,824	0/0:14,0:13:37.81:0,38,467	0/0:17,0:16:42.64:0,43,690	0/0:23,0:23:69.16:0,69,1005	0/0:10,0:10:8:0,8,389	0/0:24,0:24:65.92:0,66,954	0/0:28,0:28:81.26:0,81,1083	0/0:23,0:23:65.31:0,65,788	0/0:22,0:22:27.72:0,28,707
chr10	86564879	.	T	TTG	2044.01	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.211;DP=645;FS=4.750;HRun=0;HaplotypeScore=111.0245;InbreedingCoeff=0.9937;MQ=68.65;MQ0=13;MQRankSum=-1.227;QD=22.97;ReadPosRankSum=1.669;VQSLOD=4.4203;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:31.47:0,31,317	1/1:0,13:14:23.94:382,24,0	0/0:73,0:24:19.18:0,19,288	0/0:52,0:20:35.87:0,36,303	0/0:17,0:17:50.65:0,51,599	0/0:17,0:17:44.80:0,45,520	0/0:12,0:12:35.63:0,36,427	0/0:31,0:31:81.17:0,81,992	0/0:16,0:16:47.68:0,48,551	1/1:4,20:26:68.94:902,69,0	1/1:5,17:26:49.08:691,49,0	0/0:16,0:16:39.12:0,39,538	0/0:24,0:24:61.93:0,62,794	0/0:22,0:22:63.11:0,63,743	0/0:16,0:16:42.12:0,42,561	0/0:18,0:18:51.14:0,51,676	1/1:6,2:20:16.45:229,16,0	0/0:30,0:30:65.86:0,66,751	0/0:20,0:20:60.16:0,60,758	0/0:24,0:23:60.46:0,60,660	0/0:14,0:13:36.01:0,36,485	0/0:19,0:18:51.09:0,51,654	0/0:20,0:20:48.48:0,48,623	0/0:12,0:12:33.09:0,33,433	0/0:22,0:22:60.18:0,60,807	0/0:25,1:26:26.19:0,26,841	0/0:22,0:22:60.12:0,60,761	0/0:14,0:14:39.08:0,39,498
chr10	86567698	.	A	AT	934.09	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.612;DP=665;FS=0.628;HRun=9;HaplotypeScore=71.9438;InbreedingCoeff=0.7992;MQ=80.03;MQ0=0;MQRankSum=-3.715;QD=22.78;ReadPosRankSum=0.502;VQSLOD=4.3807;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,39:41:93.25:1029,93,0	0/0:13,0:13:29.99:0,30,260	0/0:18,0:17:34.92:0,35,241	0/0:23,0:21:1.11:0,1,134	0/0:17,0:17:41.98:0,42,365	0/0:33,0:33:86.98:0,87,755	0/0:22,0:22:56.95:0,57,491	0/0:22,1:24:22.79:0,23,403	0/0:24,0:25:56.02:0,56,475	0/0:20,0:21:50.01:0,50,419	0/0:15,0:15:35.95:0,36,305	0/0:20,0:21:40.96:0,41,335	0/0:20,0:20:47.99:0,48,417	0/0:26,0:26:71.93:0,72,617	0/0:25,0:25:33.49:0,33,445	0/0:27,0:27:71.95:0,72,621	0/0:29,0:29:71.94:0,72,616	0/0:25,0:25:58:0,58,557	0/0:25,0:25:59.94:0,60,512	0/0:15,0:15:32.97:0,33,286	0/0:41,0:41:99:0,108,930	0/0:27,0:27:65.91:0,66,559	0/0:17,0:18:46.98:0,47,388	0/0:32,0:32:80.96:0,81,703	0/0:23,0:23:59.98:0,60,521	0/0:29,1:30:47.68:0,48,634	0/0:23,0:23:65.98:0,66,570	0/0:5,0:5:15:0,15,130
chr10	86568466	.	C	CTT	7185.15	PASS	AB=0.950;AC=13;AF=0.232;AN=56;BaseQRankSum=-12.329;DP=754;FS=6.766;HRun=2;HaplotypeScore=85.8240;InbreedingCoeff=0.9420;MQ=86.78;MQ0=0;MQRankSum=-7.399;QD=38.22;ReadPosRankSum=2.813;VQSLOD=4.8049;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:99:1853,99,0	1/1:0,7:7:21.07:393,21,0	0/0:32,0:30:68.70:0,69,890	0/0:42,0:42:99:0,114,1490	0/0:29,0:29:78.24:0,78,1126	0/0:23,0:23:66.21:0,66,951	0/0:21,0:21:63.20:0,63,905	0/0:30,0:30:81.24:0,81,1123	0/0:29,0:29:87.27:0,87,1238	1/1:2,30:33:93.23:1573,93,0	1/1:0,19:19:57.20:1065,57,0	0/0:23,0:23:63.18:0,63,888	0/0:30,0:30:90.28:0,90,1283	0/0:29,0:29:87.25:0,87,1217	0/0:40,0:40:99:0,111,1632	0/0:37,0:37:99:0,108,1509	1/1:0,30:30:60.21:1123,60,0	1/1:0,22:23:63.22:1178,63,0	0/0:18,0:18:53.82:0,54,727	0/0:19,0:19:48.14:0,48,677	0/0:39,0:39:99:0,114,1628	0/0:23,0:23:69.22:0,69,995	0/0:18,0:18:51.17:0,51,749	0/0:26,0:26:75.21:0,75,1061	0/0:19,0:19:57.18:0,57,817	0/1:36,2:38:0.99:1,0,1414	0/0:28,0:28:84.15:0,84,1174	0/0:11,0:11:33.11:0,33,482
chr10	86570520	.	TTCC	T	3543.37	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.803;DP=702;FS=1.410;HRun=0;HaplotypeScore=101.9896;InbreedingCoeff=0.9599;MQ=54.13;MQ0=19;MQRankSum=-4.614;QD=32.81;ReadPosRankSum=2.541;VQSLOD=4.2654;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:89.26:0,89,1617	1/1:6,6:12:30.08:414,30,0	0/0:46,0:8:9.02:0,9,132	0/0:49,0:6:5.46:0,5,49	0/0:17,0:16:45.15:0,45,876	0/0:16,0:16:39.13:0,39,725	0/0:18,0:18:48.15:0,48,893	0/0:34,0:28:64.88:0,65,1006	0/0:25,0:25:63.18:0,63,1165	1/1:4,24:28:69.22:1039,69,0	1/1:3,14:16:45.11:646,45,0	0/0:28,0:27:75.24:0,75,1479	0/0:28,0:28:72.18:0,72,1351	0/0:28,0:28:72.12:0,72,1369	0/0:18,0:18:33.11:0,33,694	0/0:21,0:21:54.15:0,54,1038	1/1:14,11:24:53.71:672,54,0	1/1:2,24:26:51.17:772,51,0	0/0:23,0:19:48.16:0,48,918	0/0:13,0:13:33.06:0,33,548	0/0:40,0:40:91.10:0,91,1914	0/0:10,0:10:27.09:0,27,523	0/0:12,0:12:33.06:0,33,610	0/0:37,0:36:92.59:0,93,1889	0/0:25,0:25:66.22:0,66,1256	0/0:39,0:38:99:0,108,2063	0/0:19,0:19:54.19:0,54,1085	0/0:11,0:11:33.11:0,33,698
chr10	86570566	.	CT	C	253.89	PASS	AB=0.854;AC=4;AF=0.071;AN=56;BaseQRankSum=7.777;DP=630;FS=0.000;HRun=2;HaplotypeScore=106.9195;InbreedingCoeff=-0.0794;MQ=60.60;MQ0=6;MQRankSum=-6.909;QD=2.82;ReadPosRankSum=-1.101;VQSLOD=-0.6507;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:94.61:0,95,1627	0/1:9,4:13:99:105,0,364	0/0:29,0:9:23.72:0,24,269	0/0:36,0:17:40.97:0,41,513	0/0:20,0:20:60.20:0,60,894	0/0:18,0:18:54.18:0,54,809	0/0:14,0:14:42.14:0,42,630	0/0:24,0:24:66.22:0,66,973	0/0:20,0:20:60.20:0,60,898	0/1:27,6:33:99:116,0,1069	0/1:22,7:29:99:101,0,859	0/0:34,0:34:99:0,102,1507	0/0:21,0:21:63.21:0,63,940	0/0:27,0:27:81.27:0,81,1212	0/0:14,0:14:36.12:0,36,539	0/0:9,0:9:27.09:0,27,405	0/1:15,0:15:41.38:41,0,386	0/0:24,0:24:69.23:0,69,1029	0/0:24,0:24:69.18:0,69,955	0/0:14,0:14:42.14:0,42,629	0/0:37,0:37:99:0,108,1617	0/0:13,0:13:39.13:0,39,584	0/0:12,0:12:36.12:0,36,540	0/0:34,0:34:98.31:0,98,1398	0/0:17,0:17:51.16:0,51,745	0/0:31,0:30:84.28:0,84,1237	0/0:18,0:17:51.17:0,51,763	0/0:4,0:3:9.03:0,9,134
chr10	86570579	.	T	TTCC	5476.80	PASS	AB=0.748;AC=10;AF=0.179;AN=56;BaseQRankSum=8.166;DP=639;FS=5.749;HRun=0;HaplotypeScore=108.3141;InbreedingCoeff=0.7180;MQ=56.49;MQ0=9;MQRankSum=-4.689;QD=33.19;ReadPosRankSum=2.851;VQSLOD=5.1076;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,41:51:42.47:1569,42,0	0/1:8,7:16:31.44:465,0,31	0/0:35,0:8:5.67:0,6,64	0/0:36,0:14:17.70:0,18,219	0/0:17,0:17:51.16:0,51,749	0/0:16,0:16:45.14:0,45,655	0/0:18,0:18:51.12:0,51,719	0/0:28,0:27:54.15:0,54,741	0/0:18,0:18:54.18:0,54,803	1/1:16,15:31:35.99:1131,36,0	1/1:11,17:28:18.73:1182,19,0	0/0:31,0:31:84.26:0,84,1222	0/0:23,0:23:62.98:0,63,893	0/0:28,0:28:66.20:0,66,953	0/0:15,0:15:30.10:0,30,452	0/0:12,0:12:21.06:0,21,293	0/1:12,4:15:7.73:359,0,8	1/1:11,11:22:39.10:771,39,0	0/0:21,0:19:51.15:0,51,736	0/0:15,0:15:36.11:0,36,521	0/0:36,0:36:96.29:0,96,1376	0/0:12,0:12:33.10:0,33,478	0/0:13,0:13:36.08:0,36,516	0/0:33,0:33:78.18:0,78,1055	0/0:18,0:18:51.16:0,51,730	0/0:28,0:26:72.22:0,72,1043	0/0:17,0:16:42.11:0,42,588	0/0:3,0:2:3.01:0,3,45
chr10	86571023	.	T	TG	442.11	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=2.391;DP=532;FS=1.430;HRun=9;HaplotypeScore=61.5819;InbreedingCoeff=0.5865;MQ=61.84;MQ0=4;MQRankSum=1.055;QD=4.33;ReadPosRankSum=0.275;VQSLOD=-0.0659;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,16:29:19.13:406,19,0	0/0:9,0:9:20.94:0,21,174	0/1:28,0:12:2.50:2,0,57	0/0:22,0:12:13.24:0,13,126	0/0:15,0:15:29.57:0,30,238	0/0:25,0:25:53.97:0,54,464	0/0:19,0:18:33.03:0,33,311	0/0:13,0:13:29.95:0,30,249	0/0:12,0:12:23.96:0,24,203	0/0:22,0:22:34.81:0,35,278	0/1:14,0:14:14.18:14,0,95	0/0:12,0:12:32.79:0,33,266	0/0:14,0:14:23.42:0,23,247	0/0:14,0:14:22.01:0,22,222	0/0:29,0:29:71.94:0,72,613	0/0:20,0:20:53.96:0,54,461	0/0:26,0:27:61.92:0,62,507	1/1:4,1:18:25.73:147,26,0	0/0:20,0:20:41.55:0,42,336	0/0:19,0:19:36.09:0,36,292	0/0:15,0:14:29.88:0,30,247	0/0:18,0:18:35.94:0,36,298	0/0:25,0:25:54.38:0,54,430	0/0:23,0:23:49.91:0,50,447	0/1:13,0:13:1.98:2,0,158	0/0:20,0:20:37.36:0,37,291	0/0:24,1:25:65.78:0,66,541	0/0:10,0:11:31.93:0,32,255
chr10	86571744	.	CTGTT	C	2294.08	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.459;DP=670;FS=18.414;HRun=0;HaplotypeScore=104.8871;InbreedingCoeff=0.9775;MQ=76.38;MQ0=2;MQRankSum=-1.003;QD=24.41;ReadPosRankSum=2.912;VQSLOD=2.3574;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,1:41:45.02:0,45,1966	1/1:3,4:7:12.04:193,12,0	0/0:29,0:24:18.06:0,18,356	0/0:25,0:23:15.03:0,15,297	0/0:21,0:21:34.35:0,34,717	0/0:19,0:19:48.16:0,48,1112	0/0:38,0:38:87.30:0,87,1998	0/0:29,0:29:36.12:0,36,767	0/0:24,0:24:42.14:0,42,961	1/1:12,9:20:24.04:328,24,0	1/1:2,17:19:45.11:694,45,0	0/0:32,0:32:75.26:0,75,1783	0/0:24,0:24:42.13:0,42,959	0/0:23,0:23:48.16:0,48,1081	0/0:25,1:26:15.03:0,15,1293	0/0:17,0:17:36.10:0,36,813	1/1:6,15:20:30.10:482,30,0	1/1:6,20:26:48.16:771,48,0	0/0:22,0:22:18.03:0,18,352	0/0:13,0:13:21.07:0,21,504	0/0:34,1:35:18.02:0,18,1295	0/0:21,0:21:39.13:0,39,889	0/0:21,0:21:36.11:0,36,791	0/0:29,0:29:63.69:0,64,1481	0/0:13,0:13:24.08:0,24,549	0/0:36,1:37:36.10:0,36,1805	0/0:17,0:17:36.12:0,36,843	0/0:20,0:20:30.08:0,30,673
chr10	86572389	.	CTG	C	107.72	PASS	AB=0.925;AC=11;AF=0.204;AN=54;BaseQRankSum=2.285;DP=564;FS=0.862;HRun=0;HaplotypeScore=86.0148;InbreedingCoeff=-0.1419;MQ=70.59;MQ0=10;MQRankSum=0.848;QD=0.62;ReadPosRankSum=1.665;VQSLOD=0.8436;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:26.97:0,27,271	1/1:11,0:10:1.30:7,1,0	./.	0/0:24,0:17:2.88:0,3,15	0/1:9,0:9:20.99:21,0,122	0/1:16,2:18:50.41:50,0,201	0/0:25,0:27:6.33:0,6,416	0/0:26,0:26:20.46:0,20,202	0/0:10,0:10:21.07:0,21,297	0/0:26,0:26:35.65:0,36,356	0/0:12,0:12:8.94:0,9,71	0/1:13,2:14:45.28:45,0,180	0/0:17,0:17:24.06:0,24,324	0/1:25,1:26:8.89:9,0,375	0/1:20,2:22:6.59:7,0,272	0/0:12,0:13:23.49:0,23,341	0/0:22,0:22:16.60:0,17,130	0/0:27,0:26:27.07:0,27,243	0/0:16,0:16:5.81:0,6,58	0/0:13,0:13:10.96:0,11,176	0/1:33,3:37:20.90:21,0,427	0/1:10,1:10:36.31:38,0,36	0/1:19,0:19:22.02:22,0,338	0/0:41,0:41:44.23:0,44,836	0/0:9,0:9:9.02:0,9,111	0/0:29,0:29:48.85:0,49,591	0/0:20,0:20:30.10:0,30,443	0/1:5,1:6:24.13:24,0,81
chr10	86572907	.	G	GA	1688.84	PASS	AB=0.950;AC=10;AF=0.179;AN=56;BaseQRankSum=-6.369;DP=564;FS=0.475;HRun=10;HaplotypeScore=61.3792;InbreedingCoeff=0.6733;MQ=70.32;MQ0=7;MQRankSum=-2.185;QD=16.40;ReadPosRankSum=0.019;VQSLOD=3.9260;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:45.48:0,45,515	1/1:1,9:10:27.07:288,27,0	0/0:44,0:20:5.76:0,6,202	0/0:39,0:19:0.79:0,1,105	0/0:22,0:22:55.93:0,56,447	0/0:18,0:18:50.94:0,51,419	0/0:14,0:14:37.51:0,38,300	0/0:30,0:31:82.07:0,82,645	0/0:17,0:17:44.92:0,45,369	1/1:11,18:29:10.74:500,11,0	1/1:8,18:25:35.30:564,35,0	0/0:17,0:17:43.96:0,44,348	0/1:8,1:9:8.02:8,0,148	0/0:19,0:20:52.96:0,53,421	0/0:17,0:19:46.01:0,46,356	0/0:20,0:20:47.94:0,48,394	1/1:4,17:22:41.27:474,41,0	0/0:22,0:22:62.91:0,63,517	0/0:24,0:24:65.87:0,66,533	0/0:21,0:21:50:0,50,417	0/1:5,0:7:17.66:18,0,66	0/0:4,0:4:5.99:0,6,49	0/0:11,0:11:23.95:0,24,197	0/0:10,0:10:23.93:0,24,191	0/0:23,0:23:62.20:0,62,515	0/0:21,1:22:21.93:0,22,382	0/0:20,1:20:18.90:0,19,357	0/0:13,0:15:40.02:0,40,307
chr10	86574002	.	ATCTGCGTTCAGTTCAT	A	2709.33	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.603;DP=589;FS=7.460;HRun=0;HaplotypeScore=245.5670;InbreedingCoeff=0.9903;MQ=90.56;MQ0=0;MQRankSum=-7.745;QD=69.47;ReadPosRankSum=-0.178;VQSLOD=2.1437;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:29:48.16:2124,48,0	0/0:12,0:12:33.11:0,33,2375	0/0:27,0:27:61.55:0,62,3742	0/0:20,0:20:54.17:0,54,2941	0/0:20,0:20:60.21:0,60,4118	0/0:16,0:16:39.12:0,39,2847	0/0:35,0:35:99:0,105,6697	0/0:24,0:24:66.22:0,66,4127	0/0:25,0:25:72.25:0,72,5497	0/0:14,0:14:42.14:0,42,2677	0/0:10,0:10:30.10:0,30,2230	0/0:28,0:28:81.28:0,81,6279	0/0:22,0:22:63.22:0,63,4697	0/0:28,0:28:81.28:0,81,5983	0/0:21,0:21:60.21:0,60,4494	0/0:24,0:24:69.24:0,69,5017	0/0:26,0:26:75.26:0,75,5919	1/1:3,7:10:15.05:704,15,0	0/0:22,0:22:63.22:0,63,4375	0/0:15,0:15:45.15:0,45,3153	0/0:38,0:38:99:0,108,7219	0/0:14,0:14:42.14:0,42,3227	0/0:9,0:9:27.09:0,27,1917	0/0:31,0:31:84.29:0,84,6460	0/0:10,0:10:30.10:0,30,2238	0/0:23,0:23:69.24:0,69,5103	0/0:24,0:24:72.25:0,72,5461	0/0:12,0:12:30.08:0,30,2155
chr10	86574925	.	A	AGT	1274.62	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=-3.074;DP=728;FS=4.062;HRun=0;HaplotypeScore=119.6253;InbreedingCoeff=0.9015;MQ=78.13;MQ0=2;MQRankSum=-2.020;QD=10.53;ReadPosRankSum=-0.747;VQSLOD=3.3983;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:36:10.18:97,10,0	./.	0/0:54,0:40:30.48:0,30,472	0/0:58,0:42:53.37:0,53,566	0/0:18,0:18:36.11:0,36,431	0/0:27,0:28:66.02:0,66,758	0/0:23,0:23:48.15:0,48,575	0/0:35,0:35:54.14:0,54,628	0/0:24,0:24:57.16:0,57,672	1/1:19,0:18:17.91:147,18,0	1/1:8,0:8:3:25,3,0	0/0:33,0:34:81.06:0,81,928	0/0:21,0:21:48.13:0,48,564	0/0:16,0:16:36.11:0,36,432	0/0:28,0:28:72.20:0,72,841	0/0:34,0:34:78.24:0,78,935	1/1:26,0:26:9.84:108,10,0	1/1:8,22:31:66.23:1056,66,0	0/0:10,0:10:15.03:0,15,169	0/0:11,0:11:24.07:0,24,288	0/0:45,1:48:5.76:0,6,944	0/0:16,0:16:36.11:0,36,431	0/0:17,0:17:48.13:0,48,563	0/0:39,0:39:99:0,99,1119	0/0:11,0:12:20.89:0,21,230	0/0:30,0:32:83.91:0,84,952	0/0:23,0:24:65.86:0,66,747	0/0:17,0:17:48.15:0,48,575
chr10	86575133	.	CTTTTTGT	C	808.92	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=5.489;DP=450;FS=3.382;HRun=0;HaplotypeScore=101.6353;InbreedingCoeff=0.8207;MQ=65.86;MQ0=13;MQRankSum=-4.327;QD=17.98;ReadPosRankSum=0.968;VQSLOD=3.0541;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:42.12:0,42,1188	0/1:5,0:5:0:0,0,0	0/0:51,0:18:8.94:0,9,213	0/0:44,0:20:24.47:0,24,384	0/0:10,0:10:15.03:0,15,429	0/0:15,0:15:27.09:0,27,808	0/0:16,0:16:33.09:0,33,1070	0/0:34,0:33:58.35:0,58,1429	0/0:12,0:12:15.05:0,15,545	1/1:1,3:4:9.03:198,9,0	1/1:3,4:7:8.95:150,9,0	0/0:7,0:7:18.06:0,18,547	0/0:9,0:9:18.02:0,18,469	0/0:5,0:5:6.02:0,6,218	0/0:7,0:7:18.04:0,18,299	0/0:10,0:10:21.07:0,21,686	1/1:23,6:29:41.81:591,42,0	0/0:21,0:21:54.19:0,54,1240	0/0:23,0:20:33.04:0,33,749	0/0:17,0:17:30.07:0,30,895	0/0:17,0:17:36.09:0,36,1082	0/0:8,0:8:21.07:0,21,601	0/0:5,0:5:9.03:0,9,326	0/0:13,0:13:30.06:0,30,825	0/0:10,0:10:30.09:0,30,965	0/0:14,0:14:27.05:0,27,715	0/0:21,0:21:54.14:0,54,1607	0/0:7,0:7:15.05:0,15,414
chr10	86575266	.	T	TG	850.01	PASS	AB=0.975;AC=17;AF=0.304;AN=56;BaseQRankSum=-1.380;DP=449;FS=3.574;HRun=0;HaplotypeScore=35.7248;InbreedingCoeff=0.3721;MQ=36.90;MQ0=140;MQRankSum=3.354;QD=4.86;ReadPosRankSum=3.300;VQSLOD=2.9941;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:10:1.41:41,1,0	1/1:0,4:4:6.01:62,6,0	0/0:68,0:2:2.92:0,3,17	0/0:67,0:3:2.42:0,2,49	0/0:10,0:7:19.40:0,19,145	0/0:17,0:17:31.07:0,31,247	0/0:5,0:5:11.90:0,12,100	0/1:37,0:18:17.65:18,0,63	0/0:5,0:3:5.33:0,5,27	1/1:1,7:7:14.80:113,15,0	1/1:2,0:1:2.99:24,3,0	0/0:4,0:3:5.93:0,6,40	0/0:6,0:4:9.47:0,9,92	0/0:2,0:1:2.97:0,3,20	0/0:12,0:8:8.87:0,9,57	0/0:6,0:4:10.47:0,10,65	1/1:9,26:34:42.46:574,42,0	0/0:34,0:29:20.04:0,20,82	0/1:21,0:9:9.91:23,0,10	0/1:6,1:4:8.18:27,0,8	0/1:9,0:7:4.30:19,0,4	0/0:4,0:2:0:0,0,0	0/0:5,0:4:5.97:0,6,47	0/0:7,0:7:8.81:0,9,94	0/0:9,0:8:23.77:0,24,180	1/1:13,1:12:18.96:84,19,0	0/0:13,0:8:3.05:0,3,14	0/1:13,0:4:6.41:31,0,6
chr10	86575868	.	G	GTCTTTT	231.96	PASS	AB=0.946;AC=6;AF=0.107;AN=56;BaseQRankSum=5.002;DP=389;FS=0.000;HRun=0;HaplotypeScore=92.0984;InbreedingCoeff=0.1159;MQ=58.08;MQ0=1;MQRankSum=-4.583;QD=3.41;ReadPosRankSum=-2.165;VQSLOD=1.2396;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,2:28:53.28:53,0,162	1/1:3,0:3:3.01:63,3,0	0/0:13,0:9:17.06:0,17,253	0/0:13,0:10:24.99:0,25,366	0/0:14,0:14:26.87:0,27,435	0/0:16,0:16:32.93:0,33,578	0/0:23,0:23:63.17:0,63,1112	0/0:19,0:19:26.88:0,27,405	0/0:16,0:16:32.43:0,32,548	0/0:15,0:15:11.25:0,11,87	0/1:8,0:8:35.29:66,0,35	0/0:14,0:14:27.04:0,27,481	0/0:17,0:17:44.15:0,44,571	0/0:8,0:8:14.89:0,15,291	0/0:13,0:13:36.11:0,36,748	0/0:14,0:14:36.09:0,36,676	0/1:16,0:14:47.38:47,0,110	0/1:12,0:11:68.83:122,0,69	0/0:21,0:21:33.94:0,34,521	0/0:9,0:9:14.85:0,15,217	0/0:18,0:17:29.90:0,30,474	0/0:11,0:11:21.04:0,21,344	0/0:5,0:5:4.54:0,5,71	0/0:19,0:19:41.91:0,42,737	0/0:5,0:5:9.03:0,9,170	0/0:17,0:17:40.66:0,41,712	0/0:14,0:14:30.05:0,30,458	0/0:7,0:7:17.87:0,18,180
chr10	86576157	.	CGT	C	50.63	PASS	AB=0.982;AC=9;AF=0.167;AN=54;BaseQRankSum=1.120;DP=183;FS=24.275;HRun=0;HaplotypeScore=29.3358;InbreedingCoeff=-0.0891;MQ=84.70;MQ0=4;MQRankSum=-0.741;QD=0.72;ReadPosRankSum=0.275;VQSLOD=-0.3302;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:8:18.06:18,0,170	0/0:1,0:1:3.01:0,3,48	0/0:24,1:11:17.05:0,17,285	0/1:17,1:10:11.90:12,0,100	0/0:4,0:4:9.03:0,9,131	0/0:6,0:6:14.98:0,15,228	0/0:7,2:11:16.59:0,17,261	0/0:8,0:8:17.44:0,17,246	0/0:3,0:3:9.03:0,9,135	0/0:6,2:8:6.88:0,7,130	1/1:3,0:3:2.97:20,3,0	0/1:3,0:3:23.90:24,0,81	0/0:3,0:3:6.02:0,6,85	0/1:7,0:7:34.52:44,0,35	0/0:8,0:8:17.18:0,17,270	0/0:7,0:7:14.97:0,15,211	0/1:12,1:13:8.31:8,0,194	0/1:6,0:6:21.94:22,0,113	0/0:3,0:3:9.03:0,9,137	./.	0/0:6,0:6:18.06:0,18,251	0/0:4,0:4:12.04:0,12,181	0/0:2,0:2:3.01:0,3,42	0/0:5,1:6:11.52:0,12,166	0/0:2,0:2:6.02:0,6,92	0/0:2,0:2:6.02:0,6,95	0/1:12,0:12:33.13:33,0,275	0/0:3,0:3:9.03:0,9,139
chr10	86576417	.	AGAGCC	A	2554.37	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.349;DP=520;FS=3.961;HRun=0;HaplotypeScore=101.6987;InbreedingCoeff=0.8982;MQ=90.36;MQ0=0;MQRankSum=-5.560;QD=43.29;ReadPosRankSum=1.953;VQSLOD=3.7712;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,3199	1/1:1,2:3:5.95:82,6,0	0/0:19,0:19:43.70:0,44,1127	0/0:23,0:24:60.02:0,60,1343	0/0:10,0:10:27.09:0,27,844	0/0:17,0:17:42.14:0,42,1289	0/0:35,0:35:99:0,99,3000	0/0:19,0:19:54.18:0,54,1602	0/0:22,0:22:63.22:0,63,1940	1/1:2,12:14:33.11:702,33,0	1/1:2,3:5:6.02:128,6,0	0/0:15,0:15:45.15:0,45,1373	0/0:20,0:20:60.19:0,60,1754	0/0:19,0:19:54.19:0,54,1628	0/0:21,0:21:57.20:0,57,1780	0/0:23,0:23:66.23:0,66,1953	1/1:2,35:37:84.29:1789,84,0	0/0:30,0:30:87.30:0,87,2641	0/0:16,0:16:45.15:0,45,1235	0/0:9,0:9:23.18:0,23,749	0/0:47,0:47:99:0,135,4125	0/0:7,0:7:18.06:0,18,540	0/0:9,0:9:23.96:0,24,684	0/0:23,0:23:66.23:0,66,2057	0/0:5,0:5:11.95:0,12,371	0/0:14,0:14:36.11:0,36,1041	0/0:18,0:18:51.15:0,51,1413	0/0:2,0:2:6.02:0,6,188
chr10	86577126	.	AGGT	A	520.71	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=0.092;DP=419;FS=7.957;HRun=0;HaplotypeScore=89.8275;InbreedingCoeff=0.6144;MQ=72.64;MQ0=1;MQRankSum=-0.378;QD=22.64;ReadPosRankSum=-2.260;VQSLOD=2.3510;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,106,1011	0/0:12,0:12:31.42:0,31,310	0/0:21,0:12:29.96:0,30,389	0/1:10,0:9:12.28:12,0,188	0/0:16,0:16:48.16:0,48,1117	0/0:18,0:18:51.13:0,51,1094	0/0:15,0:15:45.15:0,45,1068	0/0:28,0:30:76.81:0,77,1110	0/0:11,0:11:33.10:0,33,757	0/0:21,0:21:44.03:0,44,447	0/0:13,0:13:35.93:0,36,323	0/0:14,0:14:42.14:0,42,970	0/0:4,0:4:12.04:0,12,268	0/0:4,0:4:12.04:0,12,292	0/0:14,0:14:42.14:0,42,981	0/0:14,0:14:42.14:0,42,1002	0/0:23,0:25:58.54:0,59,568	1/1:0,13:13:33.11:612,33,0	0/0:26,0:26:63.75:0,64,943	0/0:7,0:7:14.02:0,14,207	0/0:13,0:13:32.45:0,32,455	0/0:9,0:9:27.08:0,27,566	0/0:9,0:9:27.09:0,27,610	0/0:9,0:9:27.05:0,27,600	0/0:14,0:14:42.14:0,42,951	0/0:24,0:24:67.86:0,68,965	0/0:8,0:7:24.08:0,24,370	0/0:5,0:5:15.05:0,15,241
chr10	86577127	.	G	GT	2586.88	PASS	AB=0.875;AC=11;AF=0.196;AN=56;BaseQRankSum=4.548;DP=412;FS=2.754;HRun=0;HaplotypeScore=65.1174;InbreedingCoeff=0.8571;MQ=70.58;MQ0=1;MQRankSum=1.704;QD=21.92;ReadPosRankSum=2.116;VQSLOD=5.3443;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:40:91.55:1059,92,0	1/1:1,9:12:28.67:272,29,0	0/0:21,0:11:11.89:0,12,211	0/0:8,0:7:14.74:0,15,124	0/0:17,0:17:48.13:0,48,648	0/0:15,0:15:42.14:0,42,587	0/0:15,0:15:45.14:0,45,611	0/0:30,0:30:14.53:0,15,282	0/0:10,0:10:30.09:0,30,403	1/1:6,14:21:23.96:412,24,0	1/1:1,12:13:31.48:338,31,0	0/0:14,0:14:42.14:0,42,585	0/0:4,0:4:12.04:0,12,167	0/0:4,0:4:12.04:0,12,168	0/0:14,0:14:42.14:0,42,586	0/0:14,0:14:42.11:0,42,552	1/1:4,21:25:63.04:666,63,0	0/0:13,0:13:23.76:0,24,74	0/0:26,0:26:55.06:0,55,323	0/1:6,1:7:17.20:17,0,53	0/0:13,0:13:29.41:0,29,157	0/0:8,0:8:24.07:0,24,320	0/0:9,0:9:27.09:0,27,376	0/0:8,0:8:24.08:0,24,329	0/0:14,0:14:42.09:0,42,543	0/0:24,0:24:60.34:0,60,320	0/0:8,0:7:23.21:0,23,127	0/0:5,0:5:14.67:0,15,87
chr10	86577217	.	T	TGG	42.18	PASS	AB=0.887;AC=8;AF=0.143;AN=56;BaseQRankSum=0.074;DP=318;FS=37.665;HRun=0;HaplotypeScore=52.0505;InbreedingCoeff=-0.0174;MQ=51.88;MQ0=35;MQRankSum=-2.528;QD=0.55;ReadPosRankSum=4.165;VQSLOD=0.1654;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:17:39.81:0,40,368	0/0:2,0:2:5.98:0,6,45	0/0:23,0:6:0.79:0,1,129	0/0:10,0:3:5.69:0,6,53	0/0:16,0:15:33.09:0,33,425	0/1:13,2:14:27.62:28,0,419	0/0:5,0:4:9.03:0,9,117	0/0:26,0:23:26.19:0,26,745	0/1:7,0:7:13.91:14,0,150	0/0:12,0:10:23.28:0,23,203	1/1:3,0:3:5.42:22,5,0	0/0:6,0:4:11.07:0,11,125	0/1:3,1:3:15.01:15,0,56	0/0:3,0:2:6.02:0,6,76	0/0:13,1:14:1.66:0,2,384	0/1:7,1:8:12:12,0,189	0/0:12,0:9:25.48:0,25,202	0/0:24,0:20:57.12:0,57,755	0/0:16,0:12:36.12:0,36,481	0/0:5,0:5:15.05:0,15,206	0/0:3,0:3:9.03:0,9,117	0/0:1,0:1:3.01:0,3,38	0/0:3,0:2:6.02:0,6,81	0/0:3,0:3:9.03:0,9,122	0/0:14,0:10:29.43:0,29,325	0/1:23,2:23:2.24:2,0,738	0/1:11,3:13:72.42:72,0,218	0/0:25,0:21:48.69:0,49,600
chr10	86578545	.	T	TAGACAGAC	8892.02	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=0.985;DP=749;FS=2.087;HRun=0;HaplotypeScore=191.7969;InbreedingCoeff=0.9020;MQ=62.62;MQ0=8;MQRankSum=-9.138;QD=24.10;ReadPosRankSum=-5.935;VQSLOD=3.2711;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:26,13:40:20.98:804,21,0	1/1:8,6:16:24.08:978,24,0	0/1:26,0:15:0.62:1,0,54	0/0:27,0:13:9:0,9,90	0/0:23,0:23:35.71:0,36,847	0/0:23,0:23:30.10:0,30,749	0/0:32,0:32:42.14:0,42,1048	1/1:44,0:43:48.13:1203,48,0	0/0:28,0:28:42.14:0,42,1047	1/1:23,6:29:21.07:704,21,0	1/1:14,6:21:9.03:367,9,0	0/0:41,0:41:90.28:0,90,2131	0/0:27,0:27:57.18:0,57,1331	0/0:30,0:30:48.15:0,48,1131	0/0:39,0:39:54.19:0,54,1325	0/0:30,0:30:54.19:0,54,1272	1/1:21,6:30:27.09:1102,27,0	1/1:9,0:17:17.87:187,18,0	1/1:18,0:22:20.99:444,21,0	1/1:11,2:15:6.02:245,6,0	1/1:25,4:32:5.95:244,6,0	0/0:28,0:28:39.12:0,39,903	0/0:15,0:15:18.04:0,18,350	0/0:25,0:26:51.13:0,51,1196	0/0:10,0:10:15.05:0,15,359	1/1:27,0:35:33.08:948,33,0	1/1:21,8:30:36.12:1422,36,0	1/1:7,0:10:9.03:244,9,0
chr10	86581263	.	G	GCA	6911.78	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.219;DP=721;FS=0.000;HRun=0;HaplotypeScore=99.0940;InbreedingCoeff=0.9969;MQ=89.75;MQ0=0;MQRankSum=-2.983;QD=49.37;ReadPosRankSum=3.433;VQSLOD=5.5422;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,29:36:81.28:1513,81,0	1/1:0,10:10:30.10:561,30,0	0/0:28,0:28:75.15:0,75,1046	0/0:28,0:28:78.18:0,78,1047	0/0:15,0:15:42.12:0,42,598	0/0:21,0:21:63.21:0,63,921	0/0:22,0:22:63.18:0,63,887	0/0:28,0:28:78.26:0,78,1142	0/0:15,0:15:42.14:0,42,619	1/1:2,28:30:87.28:1580,87,0	1/1:3,12:15:36.12:674,36,0	0/0:37,0:37:99:0,108,1566	0/0:20,0:20:60.20:0,60,881	0/0:34,0:34:99:0,102,1477	0/0:29,0:29:81.27:0,81,1190	0/0:33,0:33:96.32:0,96,1409	1/1:0,49:49:99:2584,138,0	0/0:20,0:20:54.14:0,54,760	0/0:27,0:26:81.26:0,81,1174	0/0:19,0:19:54.18:0,54,795	0/0:37,0:37:99:0,108,1587	0/0:17,0:17:45.15:0,45,659	0/0:24,0:24:72.24:0,72,1060	0/0:34,0:34:99:0,99,1436	0/0:27,0:27:81.24:0,81,1151	0/0:23,1:24:16.02:0,16,942	0/0:23,0:23:66.20:0,66,946	0/0:19,0:19:57.19:0,57,838
chr10	86581286	.	AT	A	1035.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.634;DP=720;FS=11.336;HRun=1;HaplotypeScore=101.3865;InbreedingCoeff=0.9996;MQ=83.01;MQ0=0;MQRankSum=-4.975;QD=28.75;ReadPosRankSum=-0.729;VQSLOD=2.1204;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:81.27:1130,81,0	0/0:11,0:11:33.11:0,33,527	0/0:35,0:34:95.31:0,95,1467	0/0:27,0:26:71.68:0,72,1047	0/0:19,0:19:54.18:0,54,863	0/0:19,0:19:57.19:0,57,904	0/0:26,0:26:78.23:0,78,1186	0/0:36,0:36:99:0,105,1658	0/0:18,0:18:54.18:0,54,861	0/0:32,0:32:90.31:0,90,1429	0/0:14,0:14:39.13:0,39,623	0/0:34,0:34:99:0,102,1615	0/0:25,0:25:75.26:0,75,1194	0/0:26,0:26:78.25:0,78,1223	0/0:26,0:26:75.24:0,75,1175	0/0:30,0:30:90.31:0,90,1439	0/0:46,0:46:99:0,138,2197	0/0:14,0:14:39.13:0,39,607	0/0:27,0:26:81.28:0,81,1267	0/0:20,0:20:60.20:0,60,957	0/0:33,0:33:99:0,99,1532	0/0:18,0:18:54.18:0,54,863	0/0:25,0:25:75.25:0,75,1181	0/0:36,0:36:99:0,108,1720	0/0:23,0:23:69.22:0,69,1081	0/0:26,0:26:78.25:0,78,1217	0/0:20,0:20:60.20:0,60,958	0/0:18,0:18:54.18:0,54,863
chr10	86581393	.	TA	T	3719.23	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.571;DP=570;FS=0.000;HRun=2;HaplotypeScore=58.0857;InbreedingCoeff=0.9979;MQ=95.30;MQ0=0;MQRankSum=-3.342;QD=36.82;ReadPosRankSum=1.894;VQSLOD=4.1692;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:78.25:1012,78,0	1/1:0,7:7:21.07:272,21,0	0/0:27,0:27:73.42:0,73,1032	0/0:27,0:27:78.26:0,78,1128	0/0:10,0:10:30.10:0,30,443	0/0:13,0:13:39.13:0,39,584	0/0:20,0:20:57.19:0,57,852	0/0:24,0:24:72.23:0,72,1042	0/0:22,0:22:66.20:0,66,932	1/1:0,21:21:63.20:815,63,0	1/1:2,8:10:24.06:296,24,0	0/0:26,0:26:75.25:0,75,1122	0/0:19,0:19:57.16:0,57,809	0/0:23,0:23:69.22:0,69,1013	0/0:22,0:22:66.22:0,66,988	0/0:26,0:26:78.26:0,78,1151	1/1:0,35:35:99:1324,102,0	0/0:26,0:26:78.26:0,78,1151	0/0:21,0:21:60.15:0,60,823	0/0:12,0:12:36.12:0,36,539	0/0:30,0:30:90.27:0,90,1305	0/0:12,0:12:36.12:0,36,538	0/0:17,0:17:51.16:0,51,744	0/0:23,0:23:69.19:0,69,1009	0/0:13,0:13:39.13:0,39,585	0/0:20,1:21:24.28:0,24,841	0/0:22,0:22:66.22:0,66,985	0/0:13,0:13:39.12:0,39,564
chr10	86582264	.	G	GATTT	1436.59	PASS	AC=14;AF=0.412;AN=34;BaseQRankSum=-3.960;DP=299;FS=2.155;HRun=0;HaplotypeScore=49.5735;InbreedingCoeff=0.7049;MQ=61.94;MQ0=1;MQRankSum=-1.903;QD=11.31;ReadPosRankSum=-1.801;VQSLOD=1.7100;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:19:21.02:0,21,196	0/0:1,0:5:5.97:0,6,48	./.	./.	0/0:14,0:14:9.03:0,9,139	0/0:14,0:14:18.06:0,18,279	0/0:4,0:4:6.02:0,6,93	1/1:54,0:53:26.93:379,27,0	0/0:7,0:7:3.01:0,3,46	./.	0/0:9,0:15:12.01:0,12,112	0/0:12,0:12:6.02:0,6,93	./.	./.	./.	0/0:8,0:8:6.02:0,6,93	./.	1/1:9,9:18:21.07:493,21,0	1/1:7,1:7:3.01:71,3,0	./.	1/1:2,1:3:3.01:71,3,0	./.	./.	./.	0/0:14,0:15:18.05:0,18,260	1/1:8,3:11:9.03:211,9,0	1/1:9,2:11:6.02:141,6,0	1/1:13,7:22:9.03:212,9,0
chr10	86582381	.	CTATT	C	2130.14	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=8.609;DP=318;FS=0.000;HRun=0;HaplotypeScore=50.2307;InbreedingCoeff=0.9148;MQ=55.10;MQ0=3;MQRankSum=-2.143;QD=28.03;ReadPosRankSum=2.442;VQSLOD=3.2856;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,12:13:24.08:389,24,0	1/1:0,5:5:9.03:151,9,0	0/0:6,0:2:6.02:0,6,66	./.	0/0:16,0:16:33.11:0,33,677	0/0:23,0:23:54.18:0,54,1255	0/0:5,0:5:9.03:0,9,223	0/0:39,0:38:75.23:0,75,1626	0/0:5,0:5:12.04:0,12,259	1/1:3,6:9:18.06:302,18,0	1/1:2,11:13:30.06:443,30,0	0/0:9,0:9:21.05:0,21,325	0/0:3,0:3:9.03:0,9,223	0/0:7,0:7:21.07:0,21,439	0/0:13,0:13:33.11:0,33,662	0/0:7,0:7:12.04:0,12,280	1/1:1,16:17:33.11:554,33,0	1/1:13,6:19:26.08:471,26,0	0/0:13,0:12:18.06:0,18,446	0/0:14,0:14:30.10:0,30,702	0/0:9,0:9:27.08:0,27,617	0/0:5,0:5:15.05:0,15,369	0/0:6,0:6:12.04:0,12,293	0/0:11,0:11:30.10:0,30,659	0/0:8,0:8:18.06:0,18,424	0/0:12,0:12:27.09:0,27,592	0/0:10,0:10:24.08:0,24,575	0/0:17,0:17:42.14:0,42,1003
chr10	86583446	.	AAT	A	4176.72	PASS	AB=0.913;AC=13;AF=0.232;AN=56;BaseQRankSum=11.878;DP=598;FS=6.913;HRun=0;HaplotypeScore=69.9150;InbreedingCoeff=0.8808;MQ=73.39;MQ0=2;MQRankSum=-2.422;QD=26.10;ReadPosRankSum=3.283;VQSLOD=4.3084;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,42:45:99:1299,102,0	1/1:0,9:9:27.09:344,27,0	0/0:9,0:9:18.05:0,18,244	0/0:14,0:14:12.05:0,12,283	0/0:15,0:15:42.14:0,42,701	0/0:29,0:29:43.34:0,43,1261	0/0:13,0:14:39.12:0,39,623	0/0:37,0:37:87.30:0,87,1452	0/0:17,0:17:42.14:0,42,689	1/1:6,22:28:66.21:840,66,0	1/1:1,13:14:36.12:458,36,0	0/0:16,0:16:48.16:0,48,803	0/0:16,0:16:36.12:0,36,602	0/0:17,1:18:6.95:0,7,665	0/0:33,0:33:75.26:0,75,1255	0/0:17,0:17:51.15:0,51,826	1/1:3,21:24:48.15:611,48,0	1/1:0,17:17:48.15:611,48,0	0/0:15,0:15:39.11:0,39,596	0/0:37,0:37:90.31:0,90,1497	0/0:29,0:29:75.26:0,75,1249	0/0:15,0:15:42.13:0,42,678	0/0:10,0:10:30.10:0,30,488	0/0:24,0:24:69.24:0,69,1154	0/0:23,1:24:28.02:0,28,1011	0/1:19,2:21:13.20:13,0,858	0/0:34,0:34:93.32:0,93,1555	0/0:15,0:15:45.15:0,45,745
chr10	86584941	.	A	ACC	212.66	PASS	AB=0.903;AC=8;AF=0.143;AN=56;BaseQRankSum=-2.122;DP=272;FS=2.213;HRun=0;HaplotypeScore=56.3890;InbreedingCoeff=-0.0547;MQ=50.70;MQ0=14;MQRankSum=0.093;QD=2.24;ReadPosRankSum=-1.907;VQSLOD=1.1996;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:5,4:10:2.02:93,0,2	0/1:3,2:5:43.62:44,0,87	0/1:20,0:5:1.29:1,0,16	0/1:14,0:4:3.65:4,0,35	0/0:10,0:10:29.29:0,29,348	0/0:11,0:11:24.72:0,25,349	0/0:12,0:12:32.61:0,33,390	0/0:15,0:14:29.42:0,29,315	0/0:7,0:6:15.05:0,15,212	0/1:7,0:7:25.36:80,0,25	0/1:10,0:9:6.87:7,0,23	0/0:6,0:5:15.04:0,15,202	0/0:5,0:5:12.03:0,12,151	0/0:12,0:12:27.04:0,27,362	0/0:11,0:11:30.09:0,30,390	0/0:7,0:7:18.06:0,18,254	0/1:18,0:18:36.16:36,0,98	0/1:9,2:11:63.65:71,0,64	0/0:9,0:9:24.04:0,24,269	0/0:6,0:5:11.60:0,12,95	0/0:4,0:4:9.02:0,9,114	0/0:4,0:3:6.02:0,6,88	0/0:7,0:6:15.05:0,15,206	0/0:6,0:6:8.69:0,9,87	0/0:7,0:7:21.07:0,21,299	0/0:12,0:12:35.69:0,36,411	0/0:13,0:13:32.95:0,33,394	0/0:13,0:10:28.47:0,28,275
chr10	86584942	.	A	ACC	467.03	PASS	AB=0.849;AC=9;AF=0.161;AN=56;BaseQRankSum=-4.463;DP=276;FS=2.243;HRun=0;HaplotypeScore=54.8263;InbreedingCoeff=0.0901;MQ=51.02;MQ0=14;MQRankSum=1.870;QD=4.67;ReadPosRankSum=-1.678;VQSLOD=2.1265;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,1:11:16.39:111,16,0	0/1:5,0:5:21.27:21,0,83	0/1:22,0:6:1.71:2,0,11	0/1:14,0:4:11.85:30,0,12	0/0:10,0:10:29.88:0,30,367	0/0:10,0:10:30.04:0,30,375	0/0:12,0:12:32.66:0,33,411	0/0:16,0:15:29.44:0,29,317	0/0:7,0:6:15.05:0,15,212	0/1:2,6:8:15.32:183,0,15	0/1:10,1:10:19.35:32,0,19	0/0:7,0:6:15.05:0,15,206	0/0:5,0:5:12.03:0,12,151	0/0:12,0:12:30.06:0,30,396	0/0:10,0:10:30.09:0,30,395	0/0:7,0:7:18.06:0,18,254	0/1:9,9:18:49.32:199,0,49	0/1:8,2:11:17.19:29,0,17	0/0:9,0:9:27.02:0,27,300	0/0:6,0:5:11.61:0,12,107	0/0:4,0:4:9.02:0,9,112	0/0:4,0:3:6.02:0,6,87	0/0:7,0:6:15.05:0,15,203	0/0:6,0:6:8.81:0,9,91	0/0:7,0:7:21.07:0,21,299	0/0:12,0:12:35.69:0,36,416	0/0:12,0:12:32.91:0,33,389	0/0:13,0:10:29.53:0,30,241
chr10	86584943	.	A	ACC	124.77	PASS	AB=0.931;AC=7;AF=0.125;AN=56;BaseQRankSum=-2.189;DP=278;FS=2.209;HRun=0;HaplotypeScore=56.1562;InbreedingCoeff=0.1274;MQ=51.09;MQ0=14;MQRankSum=1.012;QD=1.83;ReadPosRankSum=-0.481;VQSLOD=1.4133;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:9.50:49,9,0	0/1:5,0:5:3.17:3,0,103	0/0:22,0:6:14.38:0,14,68	0/1:14,0:4:8.19:8,0,17	0/0:10,0:10:30.04:0,30,374	0/0:10,0:10:30.07:0,30,386	0/0:12,0:12:32.31:0,32,425	0/0:16,0:15:32.28:0,32,329	0/0:7,0:6:15.05:0,15,207	0/1:8,0:8:26.66:48,0,27	0/1:7,3:11:19.34:21,0,19	0/0:7,0:6:18.03:0,18,229	0/0:5,0:5:12.04:0,12,152	0/0:12,0:12:30.10:0,30,417	0/0:10,0:10:30.10:0,30,401	0/0:7,0:7:18.06:0,18,255	0/1:17,1:18:90.99:118,0,91	0/0:11,0:11:1.34:0,1,45	0/0:9,0:9:27.06:0,27,321	0/0:6,0:5:11.61:0,12,109	0/0:4,0:4:9.02:0,9,114	0/0:4,0:3:6.02:0,6,86	0/0:7,0:6:15.01:0,15,183	0/0:7,0:7:8.86:0,9,96	0/0:7,0:7:21.07:0,21,297	0/0:12,0:12:35.59:0,36,405	0/0:12,0:12:32.90:0,33,389	0/0:13,0:10:26.90:0,27,257
chr10	86585316	.	TCA	T	657.37	PASS	AC=22;AF=1.000;AN=22;DP=167;FS=0.000;HRun=0;HaplotypeScore=14.8943;InbreedingCoeff=-0.1279;MQ=22.65;MQ0=138;QD=9.01;VQSLOD=2.3906;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,2:2:6.02:66,6,0	1/1:0,1:1:3.01:34,3,0	./.	./.	./.	1/1:6,1:1:3.01:35,3,0	./.	./.	./.	1/1:1,3:2:6:71,6,0	1/1:5,1:2:5.91:50,6,0	1/1:8,1:1:3.01:34,3,0	./.	1/1:4,2:2:6.02:69,6,0	./.	1/1:6,3:3:9.03:102,9,0	./.	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:34,3,0	./.	1/1:1,4:4:12.04:139,12,0	1/1:3,2:2:6.02:94,6,0	./.	./.
chr10	86585565	.	CT	C	247.94	PASS	AB=1.000;AC=18;AF=0.818;AN=22;BaseQRankSum=-0.361;DP=64;FS=8.451;HRun=8;HaplotypeScore=21.4110;InbreedingCoeff=-0.1731;MQ=64.95;MQ0=39;MQRankSum=0.794;QD=6.36;ReadPosRankSum=2.382;VQSLOD=-0.4070;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,2:2:2.20:30,2,0	./.	0/1:11,0:3:25.55:26,0,26	0/1:8,0:3:20.20:20,0,34	1/1:0,1:1:3.01:38,3,0	./.	./.	./.	1/1:0,1:1:3.01:30,3,0	1/1:3,1:1:3.01:31,3,0	0/0:2,1:1:0:0,0,0	1/1:0,1:1:3.01:35,3,0	1/1:0,1:1:3:29,3,0	./.	./.	1/1:0,2:2:6.01:62,6,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:2,1:1:3.01:30,3,0	./.
chr10	86585642	.	TGGTTC	T	1808.30	PASS	AB=0.805;AC=22;AF=0.423;AN=52;BaseQRankSum=5.264;DP=244;FS=0.000;HRun=0;HaplotypeScore=50.7169;InbreedingCoeff=-0.3078;MQ=32.35;MQ0=71;MQRankSum=0.920;QD=9.67;ReadPosRankSum=3.874;VQSLOD=1.3876;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,1:7:42.49:42,0,81	0/1:3,2:4:18.57:97,0,19	0/0:6,0:3:2.99:0,3,23	0/0:9,0:4:1.81:0,2,5	0/1:6,7:11:23.03:206,0,23	0/0:6,0:5:15.03:0,15,164	0/1:13,1:10:30.94:31,0,161	0/0:15,0:10:25.25:0,25,231	0/0:3,0:2:2.04:0,2,6	0/1:9,5:11:99:248,0,137	0/1:9,7:14:99:251,0,100	0/1:5,0:5:0.26:15,0,0	0/1:4,1:4:13.16:48,0,13	0/1:5,2:6:2.95:96,0,3	0/1:4,1:5:13.70:44,0,14	0/1:7,2:7:32.30:101,0,32	1/1:10,0:5:1.31:10,1,0	0/1:10,0:5:0.79:1,0,4	0/1:10,0:3:3.90:4,0,25	0/1:9,5:11:99:185,0,138	./.	./.	0/1:5,4:8:49.32:173,0,49	1/1:8,0:2:2.22:7,2,0	0/1:5,4:8:99:191,0,125	0/0:8,0:3:0.19:0,0,29	1/1:5,4:5:11.48:197,11,0	0/0:5,0:1:3:0,3,28
chr10	86585646	.	TC	T	1547.34	PASS	AB=0.900;AC=45;AF=0.900;AN=50;BaseQRankSum=0.890;DP=252;FS=11.427;HRun=1;HaplotypeScore=44.9241;InbreedingCoeff=0.2536;MQ=24.90;MQ0=71;MQRankSum=-0.156;QD=6.70;ReadPosRankSum=2.270;VQSLOD=-0.5306;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,3:9:17.04:91,17,0	1/1:4,1:4:11.55:79,12,0	0/0:2,0:1:2.37:0,2,8	0/0:5,0:2:1.55:0,2,4	1/1:16,0:14:10.03:97,10,0	1/1:6,0:5:4.96:41,5,0	1/1:14,1:10:7.49:89,7,0	1/1:12,2:9:20.30:100,20,0	1/1:4,0:3:2.92:17,3,0	1/1:14,0:11:22.45:116,22,0	1/1:17,0:15:31.45:156,31,0	1/1:7,0:7:8.54:45,9,0	1/1:5,0:4:5.31:26,5,0	1/1:7,0:6:3.69:50,4,0	1/1:6,0:5:11.52:62,12,0	1/1:9,0:7:17.26:97,17,0	1/1:11,0:6:11.70:70,12,0	1/1:11,0:5:11.72:73,12,0	1/1:10,0:2:4.87:17,5,0	1/1:17,0:14:12.94:122,13,0	./.	./.	1/1:9,1:9:20.29:104,20,0	./.	0/1:8,1:8:13.76:66,0,14	1/1:8,0:3:2.22:7,2,0	1/1:9,1:4:15.24:104,15,0	1/1:4,1:1:2.90:16,3,0
chr10	86585647	.	CT	C	1059.51	PASS	AB=0.802;AC=31;AF=0.646;AN=48;BaseQRankSum=-6.036;DP=262;FS=0.000;HRun=8;HaplotypeScore=57.5309;InbreedingCoeff=0.0776;MQ=26.19;MQ0=70;MQRankSum=1.295;QD=5.09;ReadPosRankSum=-0.514;VQSLOD=-0.3616;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,6:9:11.52:100,12,0	1/1:4,1:4:5.41:51,5,0	./.	0/0:4,0:1:0.47:0,0,1	0/1:13,3:14:31.86:45,0,32	1/1:2,4:5:12.02:116,12,0	1/1:12,3:10:5.53:57,6,0	1/1:8,6:9:21.02:200,21,0	0/0:2,2:3:0:0,0,0	0/1:14,1:12:11.50:24,0,11	1/1:10,8:16:11.13:162,11,0	0/0:5,3:8:2.97:0,3,20	0/0:3,2:4:0.47:0,0,1	0/1:6,2:7:18.61:19,0,32	1/1:8,0:7:5.40:46,5,0	1/1:7,2:7:2.43:27,2,0	1/1:12,0:7:3.38:25,3,0	0/0:10,1:5:0.47:0,0,1	1/1:8,2:2:6.01:58,6,0	0/1:9,7:14:8.24:73,0,8	./.	./.	0/1:7,4:10:3.14:74,0,3	./.	1/1:10,1:10:1.73:19,2,0	1/1:7,1:3:3:29,3,0	1/1:11,0:5:4.43:49,4,0	0/0:5,0:1:0:0,0,0
chr10	86585678	.	GGCCTTGCGCTT	G	4997.22	PASS	AB=0.948;AC=17;AF=0.327;AN=52;BaseQRankSum=11.269;DP=333;FS=51.471;HRun=0;HaplotypeScore=136.8263;InbreedingCoeff=-0.5154;MQ=37.08;MQ0=49;MQRankSum=-7.084;QD=20.91;ReadPosRankSum=2.085;VQSLOD=2.0415;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:17:29.80:0,30,1503	0/1:6,4:9:99:404,0,671	./.	./.	0/1:28,0:25:99:732,0,1611	0/1:14,0:13:99:566,0,887	0/1:15,0:11:55.76:56,0,1510	0/0:17,0:14:39.13:0,39,1765	0/0:4,0:4:6.02:0,6,355	0/1:9,6:13:99:603,0,1131	0/1:14,11:23:99:875,0,1665	0/1:8,0:8:61.59:62,0,521	0/0:6,0:6:12.04:0,12,710	0/1:9,0:8:68.80:69,0,885	0/1:8,0:8:48.55:49,0,1221	0/1:13,0:11:69.19:69,0,1394	0/0:11,0:6:18.06:0,18,1066	0/0:13,0:7:18.06:0,18,1001	0/0:11,0:9:27.07:0,27,1412	0/1:21,0:19:99:148,0,1389	0/0:4,0:1:3.01:0,3,178	0/1:5,0:4:99:170,0,169	0/1:12,0:12:99:244,0,1035	0/0:7,0:4:12.04:0,12,710	0/1:14,0:14:99:304,0,1226	0/1:22,0:18:99:307,0,2084	0/1:12,0:8:99:261,0,868	0/1:8,0:3:78.81:79,0,327
chr10	86585679	.	GCCTTGCGCTTC	G	5746.81	PASS	AB=0.857;AC=17;AF=0.327;AN=52;BaseQRankSum=11.215;DP=328;FS=54.609;HRun=0;HaplotypeScore=130.5156;InbreedingCoeff=-0.5155;MQ=37.19;MQ0=49;MQRankSum=-8.279;QD=24.35;ReadPosRankSum=2.118;VQSLOD=2.1128;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:15:29.80:0,30,1511	0/1:10,0:9:99:404,0,649	./.	./.	0/1:18,10:25:99:900,0,1594	0/1:7,7:13:99:705,0,853	0/1:14,1:11:78.68:79,0,1481	0/0:17,0:14:39.09:0,39,1654	0/0:4,0:4:6.02:0,6,349	0/1:15,0:13:99:603,0,1135	0/1:25,0:23:99:875,0,1644	0/1:7,1:8:80.53:81,0,512	0/0:6,0:6:12.04:0,12,698	0/1:8,1:8:87.70:88,0,983	0/1:7,1:8:67.50:67,0,1200	0/1:12,1:11:81.70:82,0,1362	0/0:11,0:6:18.06:0,18,1048	0/0:13,0:7:18.06:0,18,992	0/0:11,0:9:24.08:0,24,1392	0/1:17,3:18:99:184,0,1379	0/0:4,0:1:3.01:0,3,175	0/1:3,2:4:99:209,0,166	0/1:7,4:11:99:299,0,1019	0/0:7,0:4:12.04:0,12,698	0/1:9,4:13:99:387,0,1190	0/1:18,4:18:99:387,0,2049	0/1:9,3:9:99:298,0,836	0/1:7,1:3:99:100,0,339
chr10	86585729	.	C	CCAAAAGT	5453.76	PASS	AB=0.851;AC=14;AF=0.250;AN=56;BaseQRankSum=11.077;DP=449;FS=90.120;HRun=0;HaplotypeScore=131.5228;InbreedingCoeff=-0.3429;MQ=53.97;MQ0=12;MQRankSum=-9.295;QD=22.26;ReadPosRankSum=3.006;VQSLOD=0.6063;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:81.26:0,81,2105	0/1:8,4:12:99:456,0,533	0/0:7,0:6:12.04:0,12,324	0/0:11,0:7:15.05:0,15,369	0/1:20,8:27:99:859,0,1209	0/1:16,4:19:99:648,0,839	0/1:19,1:18:74.10:74,0,1069	0/0:20,0:19:57.20:0,57,1490	0/1:14,0:14:43.15:43,0,840	0/1:16,3:19:99:377,0,1078	0/1:18,8:26:99:798,0,958	0/0:16,0:16:36.12:0,36,943	0/0:10,0:10:24.08:0,24,615	0/0:13,0:13:36.12:0,36,930	0/0:18,0:18:54.17:0,54,1371	0/0:18,0:17:45.15:0,45,1187	0/0:22,0:22:66.23:0,66,1744	0/0:15,0:14:36.12:0,36,965	0/0:12,0:10:30.10:0,30,779	0/1:15,5:20:99:559,0,969	0/0:3,0:3:6.01:0,6,107	0/1:4,1:6:99:212,0,228	0/1:12,1:13:99:159,0,665	0/0:8,0:8:24.08:0,24,616	0/1:12,2:14:99:321,0,845	0/1:23,5:29:99:765,0,1403	0/1:18,1:17:74.64:75,0,991	0/1:4,1:5:99:108,0,309
chr10	86586433	.	C	CG	1837.49	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.206;DP=684;FS=2.793;HRun=1;HaplotypeScore=66.2323;InbreedingCoeff=0.9968;MQ=79.42;MQ0=0;MQRankSum=-5.106;QD=39.95;ReadPosRankSum=1.737;VQSLOD=4.4227;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,44:46:99:1932,129,0	0/0:9,0:9:27.09:0,27,351	0/0:16,0:16:39.09:0,39,487	0/0:18,0:18:53.83:0,54,650	0/0:21,0:21:60.19:0,60,778	0/0:16,0:16:48.16:0,48,623	0/0:27,0:27:78.22:0,78,993	0/0:27,0:27:69.22:0,69,896	0/0:29,0:29:78.25:0,78,1012	0/0:34,0:34:90.29:0,90,1168	0/0:16,0:16:48.14:0,48,608	0/0:39,0:39:99:0,111,1441	0/0:28,0:28:81.26:0,81,1051	0/0:32,0:32:87.28:0,87,1127	0/0:31,0:31:87.28:0,87,1127	0/0:34,0:34:96.31:0,96,1246	0/0:27,0:27:78.25:0,78,1012	0/0:23,0:23:66.19:0,66,837	0/0:17,0:17:51.17:0,51,660	0/0:8,0:8:24.08:0,24,312	0/0:44,0:44:99:0,132,1711	0/0:17,0:17:51.17:0,51,661	0/0:15,0:15:42.12:0,42,530	0/0:25,0:25:75.24:0,75,972	0/0:18,0:18:48.16:0,48,622	0/0:28,0:28:84.26:0,84,1076	0/0:22,0:22:63.20:0,63,817	0/0:17,0:17:51.17:0,51,661
chr10	86587562	.	CGT	C	111.34	PASS	AB=0.940;AC=16;AF=0.444;AN=36;BaseQRankSum=3.978;DP=613;FS=4.657;HRun=0;HaplotypeScore=74.8856;InbreedingCoeff=0.2852;MQ=65.50;MQ0=9;MQRankSum=-1.610;QD=0.45;ReadPosRankSum=2.724;VQSLOD=0.9636;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:12.79:0,13,90	./.	./.	./.	./.	0/0:25,0:24:5.38:0,5,37	1/1:29,3:33:5.85:46,6,0	./.	1/1:24,1:25:2.13:30,2,0	1/1:17,0:19:5.68:28,6,0	./.	0/0:28,0:28:6.02:0,6,83	0/0:18,0:18:8.23:0,8,75	0/1:21,0:21:2.09:2,0,79	0/1:21,1:22:19.60:20,0,117	0/1:22,0:23:3.07:3,0,62	1/1:26,0:32:8.52:42,9,0	0/0:30,0:30:30.92:0,31,335	./.	./.	0/0:52,0:50:3.01:0,3,41	0/0:14,0:14:9:0,9,120	./.	0/1:42,6:48:39.23:39,0,193	0/0:15,0:14:3.01:0,3,40	1/1:15,0:16:2.84:14,3,0	1/1:8,0:9:2.84:14,3,0	./.
chr10	86588273	.	G	GCACA	3539.76	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=6.426;DP=722;FS=26.022;HRun=0;HaplotypeScore=156.6371;InbreedingCoeff=0.7437;MQ=55.05;MQ0=5;MQRankSum=1.205;QD=23.29;ReadPosRankSum=6.951;VQSLOD=1.8088;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:27.13:501,27,0	0/1:11,0:11:6.94:174,0,7	0/0:14,0:6:14.99:0,15,197	0/0:33,0:20:38.79:0,39,476	0/0:10,0:10:18.05:0,18,308	0/0:26,0:26:47.98:0,48,745	0/0:34,0:34:75.08:0,75,1151	0/0:17,0:17:44.69:0,45,450	0/0:26,0:26:57:0,57,886	0/1:34,0:34:99:347,0,152	1/1:5,0:5:6.01:64,6,0	0/0:37,0:37:75.05:0,75,1295	0/0:22,0:22:56.93:0,57,823	0/0:30,0:30:48.08:0,48,806	0/0:26,0:26:42.10:0,42,744	0/0:29,0:29:62.97:0,63,993	1/1:26,0:26:42.17:651,42,0	1/1:2,39:42:69.24:1803,69,0	0/0:22,0:22:64.25:0,64,810	0/0:14,0:14:26.56:0,27,414	0/0:106,0:105:99:0,276,4486	0/0:19,0:19:29.95:0,30,413	0/0:7,0:7:18:0,18,270	0/0:27,0:27:66.08:0,66,1076	0/0:21,0:21:50.92:0,51,627	0/0:26,0:26:23.22:0,23,1103	0/0:14,0:14:32.78:0,33,417	0/0:7,0:7:20.94:0,21,355
chr10	86588276	.	C	CGCAG	5604.13	PASS	AB=0.966;AC=13;AF=0.232;AN=56;BaseQRankSum=-2.085;DP=742;FS=26.142;HRun=0;HaplotypeScore=153.2929;InbreedingCoeff=0.8891;MQ=53.67;MQ0=5;MQRankSum=0.556;QD=30.46;ReadPosRankSum=3.674;VQSLOD=3.1459;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,35:37:45.11:1150,45,0	1/1:1,11:13:15.05:404,15,0	0/0:16,0:7:14.18:0,14,222	0/0:37,0:21:36.61:0,37,508	0/0:10,0:10:21.04:0,21,331	0/0:26,0:26:43.90:0,44,739	0/0:33,0:33:80.92:0,81,1193	0/0:19,0:19:56.31:0,56,562	0/0:28,0:28:63.11:0,63,969	1/1:23,10:33:87.12:1573,87,0	1/1:0,5:6:6.02:162,6,0	0/0:35,0:35:76.43:0,76,1316	0/0:24,0:24:57.06:0,57,838	0/0:30,0:30:44:0,44,766	0/0:26,0:26:51.10:0,51,823	0/0:29,0:29:59.78:0,60,989	1/1:0,27:27:60.16:1554,60,0	1/1:40,0:40:50.75:756,51,0	0/0:23,0:23:59.70:0,60,781	0/0:14,0:14:26.98:0,27,434	0/0:109,0:108:99:0,285,4595	0/0:22,0:22:32.48:0,32,438	0/0:7,0:7:18.03:0,18,275	0/0:29,0:29:69.14:0,69,1112	0/0:21,0:21:50.99:0,51,634	0/1:27,1:28:5.55:6,0,1076	0/0:13,0:13:30.02:0,30,421	0/0:7,0:7:21.05:0,21,363
chr10	86588552	.	C	CGAGCCA	1420.70	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.997;DP=689;FS=4.915;HRun=0;HaplotypeScore=147.9220;InbreedingCoeff=0.7843;MQ=75.02;MQ0=0;MQRankSum=-6.329;QD=32.29;ReadPosRankSum=-3.562;VQSLOD=2.6509;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,24:44:47.95:1515,48,0	0/0:12,0:12:21.07:0,21,385	0/0:20,0:20:23.19:0,23,389	0/0:19,0:18:8.86:0,9,137	0/0:12,0:12:27.07:0,27,490	0/0:20,0:20:36.12:0,36,730	0/0:35,0:35:81.24:0,81,1612	0/0:29,0:29:48.11:0,48,923	0/0:35,0:35:72.25:0,72,1506	0/0:31,0:31:39.13:0,39,760	0/0:8,0:8:3.01:0,3,63	0/0:30,0:30:66.23:0,66,1358	0/0:23,0:23:42.14:0,42,872	0/0:28,0:28:60.21:0,60,1232	0/0:33,0:33:60.19:0,60,1199	0/0:15,0:15:30.10:0,30,607	0/0:27,0:27:51.18:0,51,1067	0/0:25,0:25:63.22:0,63,1284	0/0:17,0:17:19.28:0,19,374	0/0:18,0:18:33.11:0,33,690	0/0:61,0:61:99:0,129,2630	0/0:14,0:14:15.05:0,15,310	0/0:15,0:15:24.08:0,24,502	0/0:46,0:46:99:0,105,2151	0/0:18,0:18:39.13:0,39,804	0/0:23,0:23:39.13:0,39,788	0/0:21,0:21:39.13:0,39,814	0/0:10,0:10:21.07:0,21,394
chr10	86589165	.	T	TCACTG	5825.65	PASS	AB=0.989;AC=15;AF=0.268;AN=56;BaseQRankSum=7.649;DP=1053;FS=25.872;HRun=0;HaplotypeScore=240.2205;InbreedingCoeff=0.7612;MQ=88.48;MQ0=2;MQRankSum=-7.892;QD=19.29;ReadPosRankSum=-3.869;VQSLOD=2.3451;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:7,32:40:50.68:844,51,0	1/1:1,10:11:29.97:644,30,0	0/1:39,0:34:1.95:2,0,877	0/1:86,0:78:63.09:63,0,750	0/0:24,0:24:63.12:0,63,1108	0/0:27,0:27:75.26:0,75,1465	0/0:46,0:46:99:0,111,1983	0/0:41,0:41:96.28:0,96,1671	0/0:47,0:47:99:0,132,2529	1/1:15,20:35:90:2223,90,0	1/1:5,13:18:24.07:396,24,0	0/0:52,0:52:99:0,132,2537	0/0:38,0:38:99:0,99,1924	0/0:48,0:48:99:0,135,2510	0/0:63,0:63:99:0,172,3404	0/0:47,0:47:99:0,129,2549	1/1:4,24:28:45.15:1101,45,0	1/1:2,14:16:18.06:541,18,0	0/0:20,0:19:45.12:0,45,718	0/0:24,0:24:72.24:0,72,1394	0/0:91,0:91:99:0,241,4396	0/0:28,0:28:66.20:0,66,1256	0/0:22,0:22:57.19:0,57,1114	0/0:46,0:46:99:0,126,2453	0/0:33,0:33:93.28:0,93,1693	0/1:27,1:28:11.81:12,0,1414	0/0:26,0:25:75.22:0,75,1364	0/0:28,0:28:66.18:0,66,1245
chr10	86589315	.	GCACTGCACTT	G	3529.40	PASS	AB=0.930;AC=11;AF=0.196;AN=56;BaseQRankSum=15.043;DP=1236;FS=3.701;HRun=0;HaplotypeScore=400.3052;InbreedingCoeff=0.6524;MQ=67.93;MQ0=17;MQRankSum=-12.494;QD=11.46;ReadPosRankSum=-3.439;VQSLOD=0.7034;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,6:38:51.22:143,0,51	1/1:9,19:28:28.07:497,28,0	0/0:56,0:30:19.96:0,20,275	0/1:123,0:62:44.88:45,0,658	0/0:29,0:29:74.99:0,75,2630	0/0:21,0:21:60.19:0,60,2338	0/0:61,0:61:99:0,159,5916	0/0:43,0:41:99:0,105,3034	0/0:55,0:55:99:0,147,5137	1/1:52,12:61:98.23:2318,98,0	1/1:20,4:24:13.96:240,14,0	0/0:58,0:58:99:0,163,6215	0/0:44,0:44:99:0,120,4409	0/0:51,0:51:99:0,141,4979	0/0:57,0:57:99:0,150,5811	0/0:55,0:55:99:0,153,6305	1/1:17,1:18:19.27:226,19,0	0/1:11,1:12:60.39:60,0,70	0/0:22,0:21:56.95:0,57,1709	0/0:24,0:23:69.23:0,69,2805	0/0:142,0:141:99:0,370,14511	0/0:31,0:31:78.14:0,78,3516	0/0:16,0:16:39.12:0,39,1256	0/0:60,0:60:99:0,153,6019	0/0:27,0:27:69.22:0,69,2421	0/0:46,0:46:99:0,103,4376	0/0:19,0:19:54.19:0,54,2307	0/0:10,0:10:27.09:0,27,1176
chr10	86589324	.	T	TACACC	2864.15	PASS	AB=0.969;AC=10;AF=0.179;AN=56;BaseQRankSum=13.662;DP=1187;FS=0.422;HRun=0;HaplotypeScore=278.2473;InbreedingCoeff=0.2049;MQ=69.80;MQ0=15;MQRankSum=-10.346;QD=8.76;ReadPosRankSum=-2.037;VQSLOD=2.2017;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:34:10.56:115,0,11	1/1:20,4:24:8.49:414,8,0	0/1:54,0:28:13.98:14,0,357	0/1:122,0:63:49.51:50,0,710	0/0:31,0:31:87.27:0,87,1795	0/0:20,0:20:60.21:0,60,1360	0/0:59,0:59:99:0,175,3763	0/0:43,0:41:99:0,120,2462	0/0:56,0:56:99:0,166,3498	0/1:41,12:52:73.73:2179,0,74	1/1:13,4:17:3.28:124,3,0	0/0:57,0:57:99:0,171,3821	0/0:45,0:45:99:0,129,2847	0/0:53,0:53:99:0,153,3264	0/0:58,0:58:99:0,169,3585	0/0:55,0:55:99:0,160,3484	0/1:14,0:14:71.06:87,0,71	0/1:6,0:8:25.98:26,0,97	0/0:25,0:23:69.21:0,69,1399	0/0:23,0:23:69.23:0,69,1563	0/0:133,0:133:99:0,391,8400	0/0:30,0:30:81.27:0,81,1846	0/0:18,0:18:51.16:0,51,1058	0/0:55,0:55:99:0,159,3474	0/0:27,0:27:78.21:0,78,1679	0/0:44,0:44:99:0,115,2502	0/0:18,0:18:54.19:0,54,1233	0/0:10,0:10:27.09:0,27,607
chr10	86589394	.	T	TGAACTACACC	6106.42	PASS	AB=0.867;AC=9;AF=0.161;AN=56;BaseQRankSum=6.261;DP=1306;FS=14.571;HRun=0;HaplotypeScore=376.3630;InbreedingCoeff=0.6245;MQ=67.78;MQ0=18;MQRankSum=-9.169;QD=37.23;ReadPosRankSum=-4.652;VQSLOD=2.8427;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:12,21:36:80.54:143,0,81	1/1:23,0:23:57.02:1633,57,0	0/0:92,0:36:37.58:0,38,1098	0/0:138,0:66:47.73:0,48,1673	0/0:26,0:26:75.17:0,75,2053	0/0:19,0:19:51.12:0,51,1330	0/0:67,0:67:99:0,196,5634	0/0:39,0:38:99:0,111,2538	0/0:58,0:58:99:0,168,4765	1/1:10,40:63:99:3392,139,0	0/1:16,0:16:7.91:421,0,8	0/0:59,0:59:99:0,174,4911	0/0:54,0:54:99:0,153,4239	0/0:52,0:52:99:0,147,4433	0/0:65,0:64:99:0,186,5026	0/0:62,0:62:99:0,184,5213	1/1:10,0:10:20.87:302,21,0	0/1:16,0:16:99:215,0,131	0/0:25,0:23:63.18:0,63,1451	0/0:32,0:32:93.22:0,93,2429	0/0:129,0:129:99:0,373,10420	0/0:34,0:34:96.10:0,96,2302	0/0:29,0:29:80.91:0,81,2385	0/0:53,0:53:99:0,150,4045	0/0:27,0:27:81.24:0,81,2379	0/0:49,0:48:99:0,138,4263	0/0:20,0:20:60.19:0,60,1916	0/0:10,0:10:30.04:0,30,659
chr10	86589397	.	ACTAC	A	573.89	PASS	AB=0.861;AC=5;AF=0.089;AN=56;BaseQRankSum=10.341;DP=1315;FS=18.279;HRun=0;HaplotypeScore=251.7313;InbreedingCoeff=-0.0975;MQ=67.45;MQ0=18;MQRankSum=-7.551;QD=3.83;ReadPosRankSum=3.672;VQSLOD=0.7114;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:13.13:13,0,99	0/1:11,11:22:99:313,0,267	0/0:93,0:35:22.75:0,23,1365	0/0:141,0:65:99:0,137,2910	0/0:26,0:26:78.27:0,78,2191	0/0:18,0:18:48.16:0,48,1306	0/0:71,0:71:99:0,211,5719	0/0:42,0:41:99:0,120,2948	0/0:58,0:58:99:0,172,4555	0/1:63,0:63:99:256,0,1278	0/1:10,5:15:32.25:32,0,375	0/0:61,0:61:99:0,181,4763	0/0:51,0:51:99:0,151,4092	0/0:52,0:52:99:0,154,4247	0/0:70,0:69:99:0,205,5371	0/0:63,0:63:99:0,190,4916	0/0:9,1:10:18.93:0,19,375	0/1:14,2:16:75.88:76,0,254	0/0:26,0:24:69.24:0,69,1619	0/0:31,0:31:93.32:0,93,2495	0/0:130,0:130:99:0,379,10176	0/0:34,0:34:99:0,99,2615	0/0:29,0:29:81.25:0,81,2184	0/0:51,0:51:99:0,148,3871	0/0:28,0:28:84.29:0,84,2373	0/0:49,0:48:99:0,141,3938	0/0:21,0:21:63.22:0,63,1791	0/0:10,0:10:27.09:0,27,762
chr10	86589815	.	T	TA	1179.65	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=-6.742;DP=693;FS=2.038;HRun=6;HaplotypeScore=68.7909;InbreedingCoeff=0.4912;MQ=69.41;MQ0=0;MQRankSum=1.238;QD=13.41;ReadPosRankSum=3.002;VQSLOD=2.6661;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,42:44:99:1254,102,0	0/0:15,0:15:33.05:0,33,329	0/1:17,0:5:6.23:6,0,40	0/0:17,0:15:9.53:0,10,89	0/0:30,0:30:87.14:0,87,865	0/0:19,0:19:42.06:0,42,419	0/0:30,0:30:75.09:0,75,734	0/0:29,0:28:45.34:0,45,492	0/0:20,0:20:53.99:0,54,528	0/0:32,0:32:93.08:0,93,898	0/0:17,0:17:44.98:0,45,438	0/0:30,0:30:78.11:0,78,768	0/0:23,0:23:63.06:0,63,607	0/0:26,0:26:69.09:0,69,684	0/0:23,0:22:60.08:0,60,590	0/0:31,0:31:78.13:0,78,774	0/0:34,0:34:87.08:0,87,846	0/1:27,0:27:13.75:30,0,14	0/0:21,0:21:57.06:0,57,550	0/0:19,0:19:51:0,51,494	0/0:12,0:12:33.05:0,33,328	0/0:26,0:26:72.08:0,72,703	0/0:17,0:17:45.06:0,45,443	0/0:34,0:34:96.14:0,96,952	0/0:27,0:27:75.14:0,75,755	0/0:33,0:33:90.10:0,90,873	0/0:21,0:21:59.96:0,60,577	0/0:18,0:18:53.96:0,54,499
chr10	86593090	.	GTT	G	1429.43	PASS	AB=0.542;AC=11;AF=0.196;AN=56;BaseQRankSum=4.032;DP=594;FS=0.982;HRun=5;HaplotypeScore=80.9254;InbreedingCoeff=0.8712;MQ=71.71;MQ0=19;MQRankSum=0.208;QD=9.79;ReadPosRankSum=3.017;VQSLOD=-0.4818;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:30:26.46:477,26,0	1/1:5,0:5:10.70:96,11,0	0/0:29,0:19:52.80:0,53,525	0/0:34,0:23:62.76:0,63,569	0/0:13,0:12:32.65:0,33,345	0/0:16,0:16:41.78:0,42,430	0/0:23,0:23:46.31:0,46,473	0/0:24,0:23:66.07:0,66,624	0/0:17,0:17:48.04:0,48,552	1/1:1,22:24:52.15:502,52,0	1/1:10,0:10:25.29:195,25,0	0/0:21,0:20:44.28:0,44,451	0/0:13,0:13:37.62:0,38,401	0/0:21,0:21:43.50:0,43,467	0/0:21,0:21:42.90:0,43,566	0/0:23,0:23:58.76:0,59,643	0/1:8,44:51:17.55:226,0,18	1/1:24,0:22:15.23:108,15,0	0/0:29,0:29:66:0,66,595	0/0:14,0:13:16.91:0,17,264	0/0:26,0:26:59.85:0,60,556	0/0:10,0:10:20.87:0,21,179	0/0:13,0:13:34.48:0,34,337	0/0:31,0:31:66.93:0,67,809	0/0:12,0:11:33.04:0,33,336	0/0:21,0:21:32.25:0,32,550	0/0:25,0:24:64.96:0,65,576	0/0:12,0:10:20.68:0,21,187
chr10	86593092	.	TTTTGTGTGTGTGTGTGTG	T	978.62	PASS	AB=0.914;AC=5;AF=0.089;AN=56;BaseQRankSum=1.940;DP=609;FS=2.252;HRun=0;HaplotypeScore=238.7205;InbreedingCoeff=0.0125;MQ=69.55;MQ0=21;MQRankSum=3.087;QD=9.99;ReadPosRankSum=-0.150;VQSLOD=2.7211;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:32:99:125,0,2015	0/1:6,0:5:60.83:61,0,96	0/0:28,0:18:53.24:0,53,650	0/0:33,0:22:62.79:0,63,748	0/0:14,0:13:39.08:0,39,1334	0/0:18,0:18:53.72:0,54,2185	0/0:23,0:23:59.05:0,59,1936	0/0:25,0:24:68.59:0,69,869	0/0:16,0:16:48.10:0,48,2057	0/1:25,0:25:99:234,0,1514	0/1:10,0:10:94.60:95,0,538	0/0:23,0:22:44.33:0,44,1569	0/0:14,0:14:37.32:0,37,1549	0/0:20,0:20:43.22:0,43,2316	0/0:21,0:21:55.89:0,56,2179	0/0:23,0:23:61.03:0,61,2536	0/0:52,0:51:26.12:0,26,1773	0/1:6,18:22:4.08:582,0,4	0/0:29,0:28:69.32:0,69,1237	0/0:15,0:14:33.06:0,33,1213	0/0:27,0:27:59.97:0,60,1804	0/0:10,0:10:20.89:0,21,574	0/0:13,0:13:34.12:0,34,842	0/0:32,0:32:78.17:0,78,3518	0/0:15,0:14:39.98:0,40,1793	0/0:22,0:22:35.32:0,35,2560	0/0:26,0:25:68.95:0,69,2316	0/0:12,0:10:21.04:0,21,730
chr10	86593094	.	T	TTG	1185.58	PASS	AB=0.939;AC=28;AF=0.538;AN=52;BaseQRankSum=-0.202;DP=644;FS=0.703;HRun=0;HaplotypeScore=104.7567;InbreedingCoeff=0.1888;MQ=67.66;MQ0=22;MQRankSum=0.270;QD=2.62;ReadPosRankSum=-1.683;VQSLOD=2.1700;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:36:3.31:14,0,3	0/1:6,0:5:0:0,0,0	./.	./.	0/1:17,0:16:15.36:15,0,24	0/1:18,0:18:29.20:29,0,124	0/0:21,0:24:14.71:0,15,118	1/1:28,0:27:4.05:13,4,0	0/0:17,0:17:14.90:0,15,141	0/1:28,0:28:6.01:6,0,25	0/0:10,0:10:3:0,3,30	0/1:15,11:26:0.61:120,0,1	1/1:9,4:14:12.03:159,12,0	0/1:13,9:23:26.85:237,0,27	0/0:20,0:23:20.35:0,20,181	0/0:23,0:23:18.98:0,19,189	0/1:53,0:52:13.83:14,0,106	0/0:23,0:21:8.49:0,8,42	1/1:28,0:27:8.35:54,8,0	1/1:16,0:15:13.91:106,14,0	1/1:24,0:33:3:26,3,0	1/1:5,4:10:3.01:44,3,0	0/0:10,0:12:6:0,6,64	0/1:32,0:32:22.78:23,0,199	0/1:17,0:16:16.88:112,0,17	1/1:23,0:23:19.66:166,20,0	1/1:29,0:28:18.97:181,19,0	1/1:12,0:10:3:29,3,0
chr10	86593139	.	T	TGTGTGC	2202.40	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-2.493;DP=536;FS=0.455;HRun=0;HaplotypeScore=126.6040;InbreedingCoeff=0.8517;MQ=65.33;MQ0=14;MQRankSum=-0.539;QD=15.08;ReadPosRankSum=-3.789;VQSLOD=1.9398;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:52.60:0,53,470	0/0:6,0:5:14.93:0,15,115	0/0:22,0:12:35.95:0,36,337	0/0:32,0:21:44.60:0,45,494	0/1:7,0:7:4.74:5,0,71	0/0:21,0:21:30.29:0,30,563	0/0:14,0:14:35.94:0,36,483	1/1:25,0:25:63.93:475,64,0	0/0:8,0:8:20.40:0,20,335	0/0:25,0:25:38.88:0,39,439	0/0:9,0:9:17.75:0,18,136	0/0:24,0:23:35.50:0,36,265	0/0:13,0:13:2.18:0,2,157	0/0:21,0:21:30.86:0,31,274	0/0:16,0:16:32.69:0,33,386	0/0:12,0:12:26.88:0,27,447	0/0:51,0:50:99:0,101,1110	0/0:20,0:20:32.94:0,33,363	1/1:6,11:16:14.67:337,15,0	1/1:7,4:13:17.53:290,18,0	1/1:37,0:36:44.26:363,44,0	0/0:9,0:8:14.86:0,15,115	0/0:13,0:13:26.91:0,27,314	0/0:22,0:22:26.38:0,26,628	0/0:20,0:19:21.09:0,21,340	1/1:1,11:18:38.44:484,38,0	1/1:7,1:21:26.70:385,27,0	1/1:0,0:6:3.01:52,3,0
chr10	86594849	.	CA	C	541.05	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.291;DP=516;FS=7.324;HRun=8;HaplotypeScore=57.3268;InbreedingCoeff=0.9924;MQ=71.66;MQ0=0;MQRankSum=-0.854;QD=10.02;ReadPosRankSum=-0.142;VQSLOD=1.4573;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:38.82:298,39,0	0/0:7,0:7:21.06:0,21,253	0/0:19,0:19:38.82:0,39,421	0/0:15,0:14:29.51:0,30,319	0/0:25,0:25:60.13:0,60,697	0/0:18,0:18:54.17:0,54,650	0/0:20,0:20:48.15:0,48,580	0/0:29,0:29:75.21:0,75,883	0/0:12,0:12:33.09:0,33,387	0/0:30,0:30:78.23:0,78,932	0/0:21,0:21:48.15:0,48,580	0/0:17,0:17:33.10:0,33,399	0/0:15,0:15:33.09:0,33,387	0/0:14,0:14:36.10:0,36,423	0/0:17,0:17:42.12:0,42,495	0/0:12,0:12:30.08:0,30,351	0/0:26,0:26:72.20:0,72,847	1/1:5,12:17:39:365,39,0	0/0:13,0:13:39.09:0,39,442	0/0:21,0:21:54.14:0,54,638	0/0:13,0:13:36.11:0,36,435	0/0:12,0:12:21.05:0,21,242	0/0:10,0:10:24.07:0,24,290	0/0:12,0:12:33.10:0,33,398	0/0:21,0:21:54.15:0,54,632	0/0:18,0:18:54.15:0,54,633	0/0:33,0:33:84.21:0,84,988	0/0:12,0:12:24.07:0,24,290
chr10	86594857	.	AC	A	1053.10	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=7.666;DP=507;FS=4.928;HRun=3;HaplotypeScore=56.9506;InbreedingCoeff=0.6435;MQ=74.42;MQ0=0;MQRankSum=0.170;QD=19.87;ReadPosRankSum=1.173;VQSLOD=3.1696;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:90.28:1109,90,0	0/0:7,0:7:21.07:0,21,287	0/0:19,0:19:28.90:0,29,508	0/0:17,0:15:34.95:0,35,400	0/0:21,0:21:63.11:0,63,803	0/0:19,0:19:57.12:0,57,750	0/0:17,0:17:51.16:0,51,689	0/0:33,0:33:93.14:0,93,1117	0/0:13,0:13:39.10:0,39,504	0/0:34,0:34:93.16:0,93,1155	0/0:20,0:20:54:0,54,701	0/0:13,0:13:39.10:0,39,504	0/0:12,0:12:33.09:0,33,439	0/0:12,0:12:36.11:0,36,482	0/0:14,0:14:42.14:0,42,579	0/0:11,0:11:30.09:0,30,400	0/0:28,0:28:81.19:0,81,1045	0/1:18,0:18:50.60:51,0,64	0/0:14,0:14:42.08:0,42,497	0/0:20,0:20:60.17:0,60,780	0/0:14,0:14:42.11:0,42,545	0/0:9,0:9:26.98:0,27,315	0/0:12,0:12:33.07:0,33,405	0/0:14,0:14:42.04:0,42,507	0/0:21,0:21:60.13:0,60,745	0/0:22,0:22:66.18:0,66,849	0/0:30,0:30:84.23:0,84,1107	0/0:8,0:8:24.08:0,24,331
chr10	86594866	.	T	TTAA	816.83	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=2.741;DP=524;FS=0.000;HRun=0;HaplotypeScore=79.6676;InbreedingCoeff=0.6513;MQ=70.53;MQ0=0;MQRankSum=-3.480;QD=20.42;ReadPosRankSum=-2.307;VQSLOD=2.8255;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:84.25:0,84,1196	0/0:9,0:9:27.09:0,27,393	0/0:18,0:18:28.60:0,29,409	0/0:13,0:11:7.08:0,7,134	0/0:23,0:23:60.19:0,60,864	0/1:19,0:19:6.18:6,0,570	0/0:13,0:13:27.09:0,27,398	0/0:34,0:34:81.26:0,81,1146	0/0:14,0:14:36.12:0,36,530	0/0:30,0:30:75.25:0,75,1101	0/0:22,0:22:54.14:0,54,771	0/0:13,0:13:33.10:0,33,467	0/0:10,0:10:27.09:0,27,397	0/0:13,0:13:27.08:0,27,378	0/0:16,0:16:36.12:0,36,525	0/0:12,0:12:27.09:0,27,394	0/0:30,0:30:75.25:0,75,1091	1/1:5,15:21:45.15:910,45,0	0/0:15,0:15:36.10:0,36,493	0/0:20,0:20:45.14:0,45,639	0/0:16,0:16:39.13:0,39,571	0/0:12,0:12:27.07:0,27,357	0/0:12,0:12:33.11:0,33,486	0/0:15,0:15:42.14:0,42,614	0/0:20,0:20:51.16:0,51,719	0/0:26,0:26:69.23:0,69,1006	0/0:30,0:30:75.19:0,75,1060	0/0:11,0:11:33.11:0,33,481
chr10	86595053	.	AG	A	2789.65	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.170;DP=500;FS=23.673;HRun=2;HaplotypeScore=61.7069;InbreedingCoeff=0.9853;MQ=88.49;MQ0=0;MQRankSum=-2.534;QD=32.82;ReadPosRankSum=1.355;VQSLOD=1.8394;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1820	1/1:0,4:4:12.04:156,12,0	0/0:19,1:20:18.43:0,18,743	0/0:17,0:17:47.82:0,48,666	0/0:16,0:16:48.16:0,48,718	0/0:11,0:11:33.11:0,33,494	0/0:12,0:12:36.12:0,36,540	0/0:20,0:20:57.19:0,57,842	0/0:11,0:11:33.11:0,33,495	1/1:2,13:15:39.13:505,39,0	1/1:0,10:10:27.09:350,27,0	0/0:24,0:24:69.23:0,69,1032	0/0:13,0:13:39.13:0,39,582	0/0:18,0:18:54.18:0,54,809	0/0:22,0:22:66.22:0,66,977	0/0:24,0:24:72.23:0,72,1057	1/1:1,32:33:82.98:1055,83,0	1/1:0,23:23:69.22:896,69,0	0/0:25,0:25:69.21:0,69,1012	0/0:10,0:10:27.09:0,27,405	0/0:28,0:28:78.25:0,78,1140	0/0:7,0:7:21.07:0,21,315	0/0:8,0:8:24.08:0,24,357	0/0:21,0:21:63.20:0,63,923	0/0:5,0:5:15.05:0,15,225	0/0:23,0:23:63.21:0,63,944	0/0:24,0:24:72.23:0,72,1052	0/0:15,0:15:45.15:0,45,674
chr10	86595182	.	G	GC	471.45	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.384;DP=592;FS=0.000;HRun=4;HaplotypeScore=62.1472;InbreedingCoeff=0.9920;MQ=90.12;MQ0=0;MQRankSum=-1.808;QD=31.43;ReadPosRankSum=0.178;VQSLOD=3.7555;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,114,1284	0/0:11,0:11:33.09:0,33,374	0/0:22,0:22:54.15:0,54,606	0/0:24,0:24:51.07:0,51,546	0/0:19,0:19:48.14:0,48,544	0/0:8,0:8:21.06:0,21,238	0/0:18,0:18:54.15:0,54,613	0/0:25,0:25:69.19:0,69,775	0/0:23,0:23:63.18:0,63,714	0/0:28,0:28:78.21:0,78,878	0/0:9,0:9:27.08:0,27,306	0/0:31,0:31:84.21:0,84,933	0/0:14,0:14:42.12:0,42,476	0/0:26,0:26:75.18:0,75,830	0/0:22,0:22:66.19:0,66,749	0/0:18,0:18:54.12:0,54,593	0/0:37,0:37:99:0,111,1247	1/1:0,15:15:42.14:566,42,0	0/0:18,0:18:48.13:0,48,537	0/0:13,0:13:36.09:0,36,398	0/0:42,0:42:99:0,105,1191	0/0:17,0:17:48.12:0,48,534	0/0:10,0:10:30.09:0,30,340	0/0:25,0:25:72.20:0,72,816	0/0:19,0:19:57.16:0,57,647	0/0:21,0:21:60.16:0,60,673	0/0:27,0:27:66.19:0,66,748	0/0:8,0:8:24.04:0,24,260
chr10	86595322	.	GC	G	1115.07	PASS	AB=0.917;AC=5;AF=0.089;AN=56;BaseQRankSum=5.662;DP=347;FS=7.986;HRun=9;HaplotypeScore=44.4303;InbreedingCoeff=0.6682;MQ=74.97;MQ0=0;MQRankSum=-1.345;QD=15.71;ReadPosRankSum=3.234;VQSLOD=3.1431;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,29:39:81.04:741,81,0	0/0:2,0:4:5.68:0,6,29	0/0:13,0:11:11.62:0,12,114	0/0:4,0:4:2.74:0,3,12	0/0:8,0:8:21.04:0,21,230	0/1:10,1:11:2.42:2,0,218	0/0:26,2:28:20.32:0,20,713	0/0:9,0:9:18.01:0,18,193	0/0:12,0:12:33.10:0,33,381	0/0:0,0:6:11.20:0,11,54	0/0:1,0:4:5.85:0,6,49	0/0:14,0:14:36.11:0,36,416	0/0:5,0:5:12.03:0,12,138	0/0:21,1:23:35.36:0,35,622	0/0:9,0:9:21.06:0,21,242	0/0:8,0:8:24.07:0,24,277	0/0:11,0:18:31.38:0,31,212	1/1:2,19:21:54.03:494,54,0	0/0:11,0:11:30.09:0,30,346	0/0:12,0:12:29.81:0,30,322	0/0:26,0:27:64.22:0,64,687	0/0:10,0:10:17.70:0,18,206	0/0:8,0:8:24.07:0,24,277	0/0:9,0:9:18.04:0,18,198	0/0:7,0:7:18.05:0,18,207	0/0:7,0:7:18.05:0,18,208	0/0:15,0:15:45.12:0,45,509	0/0:5,0:5:15.04:0,15,165
chr10	86596054	.	TTAAA	T	2145.19	PASS	AC=22;AF=0.500;AN=44;BaseQRankSum=6.247;DP=244;FS=0.000;HRun=0;HaplotypeScore=39.9359;InbreedingCoeff=0.6544;MQ=73.62;MQ0=2;MQRankSum=1.645;QD=16.01;ReadPosRankSum=-0.515;VQSLOD=2.7478;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:27.09:0,27,587	./.	./.	./.	0/0:9,0:9:3.01:0,3,72	0/0:15,0:15:30.10:0,30,697	0/0:6,0:6:6.02:0,6,143	1/1:15,9:24:27.08:390,27,0	0/0:6,0:6:3.01:0,3,72	1/1:1,3:4:9.03:143,9,0	1/1:4,2:6:3.01:48,3,0	0/0:4,0:4:3.01:0,3,72	0/0:2,0:2:3.01:0,3,72	0/0:3,0:3:3.01:0,3,72	./.	0/0:4,0:4:6.02:0,6,144	1/1:15,17:32:45.15:716,45,0	1/1:14,0:19:6.01:56,6,0	1/1:6,5:11:15.05:239,15,0	1/1:6,2:8:6.02:96,6,0	1/1:5,1:6:3.01:48,3,0	./.	0/0:7,0:7:6.49:0,6,144	./.	0/0:4,0:4:12.04:0,12,287	1/1:4,4:8:12.04:189,12,0	1/1:3,2:5:6.02:96,6,0	1/1:3,8:10:18.06:287,18,0
chr10	86596759	.	ACTT	A	1032.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.728;DP=693;FS=12.949;HRun=0;HaplotypeScore=97.7148;InbreedingCoeff=0.9835;MQ=91.82;MQ0=0;MQRankSum=-2.299;QD=41.28;ReadPosRankSum=3.024;VQSLOD=4.7138;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,3116	0/0:7,0:7:21.04:0,21,367	0/0:28,0:28:72.21:0,72,1508	0/0:30,0:30:84.24:0,84,1759	0/0:12,0:12:36.12:0,36,797	0/0:11,0:11:33.11:0,33,730	0/0:25,0:25:69.24:0,69,1542	0/0:23,0:23:63.21:0,63,1341	0/0:28,0:28:81.28:0,81,1774	0/0:26,0:26:75.26:0,75,1665	0/0:8,0:8:21.07:0,21,469	0/0:30,0:30:87.30:0,87,1928	0/0:29,0:29:78.25:0,78,1685	0/0:21,0:21:63.22:0,63,1400	0/0:35,0:35:99:0,102,2245	0/0:21,0:21:63.22:0,63,1408	0/0:60,0:60:99:0,166,3598	1/1:1,24:25:69.24:1127,69,0	0/0:19,0:19:54.17:0,54,1120	0/0:11,0:11:33.11:0,33,737	0/0:48,0:48:99:0,141,3132	0/0:17,0:17:45.15:0,45,1006	0/0:15,0:15:42.14:0,42,938	0/0:43,0:43:99:0,126,2814	0/0:16,0:16:45.14:0,45,958	0/0:28,0:28:78.27:0,78,1717	0/0:22,0:22:63.22:0,63,1396	0/0:7,0:7:18.06:0,18,402
chr10	86596878	.	A	AT	912.09	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.588;DP=756;FS=1.799;HRun=0;HaplotypeScore=77.4198;InbreedingCoeff=0.9969;MQ=86.23;MQ0=0;MQRankSum=-3.344;QD=43.43;ReadPosRankSum=0.820;VQSLOD=4.1598;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1756	0/0:9,0:9:27.08:0,27,362	0/0:27,0:27:75.19:0,75,975	0/0:23,0:23:69.11:0,69,897	0/0:25,0:24:75.25:0,75,1048	0/0:15,0:15:45.12:0,45,581	0/0:30,0:30:90.29:0,90,1242	0/0:28,0:28:81.27:0,81,1133	0/0:24,0:24:72.24:0,72,1007	0/0:23,0:23:69.23:0,69,952	0/0:17,0:17:48.15:0,48,656	0/0:31,0:31:90.28:0,90,1225	0/0:30,0:30:87.28:0,87,1202	0/0:34,0:34:99:0,102,1424	0/0:32,0:32:93.31:0,93,1300	0/0:20,0:20:60.20:0,60,839	0/0:29,0:28:87.29:0,87,1217	1/1:0,21:21:63.21:1007,63,0	0/0:22,0:22:60.20:0,60,826	0/0:19,0:19:57.18:0,57,777	0/0:78,0:78:99:0,232,3211	0/0:19,0:19:54.18:0,54,755	0/0:17,0:17:48.15:0,48,656	0/0:38,0:38:99:0,114,1544	0/0:22,0:22:66.21:0,66,907	0/0:39,0:39:99:0,117,1613	0/0:31,0:31:93.29:0,93,1281	0/0:8,0:8:24.08:0,24,335
chr10	86597345	.	C	CAA	1693.78	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=-1.531;DP=569;FS=3.993;HRun=10;HaplotypeScore=71.8924;InbreedingCoeff=0.7411;MQ=59.35;MQ0=18;MQRankSum=1.465;QD=11.07;ReadPosRankSum=-1.572;VQSLOD=1.0848;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:22:45.03:0,45,502	1/1:0,3:3:6.02:89,6,0	0/0:37,0:14:17.61:0,18,126	0/1:48,0:9:2.05:2,0,86	0/0:24,0:26:57.70:0,58,596	0/0:16,0:18:41.45:0,41,389	0/0:19,0:19:45.04:0,45,450	0/1:35,0:35:4.44:4,0,471	0/0:19,0:19:42.04:0,42,420	1/1:7,16:27:58.68:714,59,0	1/1:3,15:20:47.35:589,47,0	0/0:16,0:17:47.68:0,48,467	0/0:14,0:14:31.06:0,31,325	0/0:13,0:13:33.03:0,33,335	0/0:11,0:11:30.07:0,30,305	0/0:15,0:15:31.69:0,32,333	1/1:5,14:19:32.70:449,33,0	0/0:23,0:23:47.69:0,48,262	0/0:24,0:21:38.70:0,39,448	0/0:25,0:24:65.23:0,65,630	0/0:17,0:15:26.76:0,27,255	0/0:16,0:16:45.10:0,45,458	0/0:16,0:16:39.08:0,39,396	0/0:9,0:9:15.03:0,15,152	0/0:15,0:15:42.09:0,42,427	0/0:18,1:19:1.65:0,2,385	0/0:30,0:30:69.05:0,69,694	0/0:8,0:7:11.96:0,12,122
chr10	86597355	.	AC	A	439.59	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.517;DP=562;FS=0.000;HRun=3;HaplotypeScore=61.2996;InbreedingCoeff=0.7265;MQ=60.66;MQ0=21;MQRankSum=-1.152;QD=19.98;ReadPosRankSum=-0.643;VQSLOD=2.9769;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.02:0,54,654	0/0:5,0:5:14.93:0,15,118	0/0:48,0:14:0.47:0,0,147	0/0:58,0:16:10.66:0,11,173	0/0:25,0:25:60.31:0,60,807	0/0:16,0:16:34.07:0,34,503	0/0:18,0:18:51.13:0,51,636	0/0:33,0:33:84.78:0,85,870	0/0:15,0:15:42.02:0,42,520	0/0:23,0:23:64.16:0,64,477	0/0:19,0:19:47:0,47,330	0/0:17,0:17:41.51:0,42,498	0/0:12,0:12:36.09:0,36,448	0/0:14,0:14:42.09:0,42,512	0/0:12,0:12:36.05:0,36,405	0/0:13,0:13:39.03:0,39,414	0/0:15,0:16:30.71:0,31,237	1/1:18,4:22:51.80:534,52,0	0/0:23,0:18:54.04:0,54,617	0/0:24,1:24:37.27:0,37,800	0/0:14,0:12:33.02:0,33,394	0/0:17,0:17:51.13:0,51,649	0/0:15,0:15:44.32:0,44,524	0/0:7,0:7:12.02:0,12,144	0/0:18,0:18:54.13:0,54,664	0/0:21,0:21:59.59:0,60,677	0/0:31,0:31:93.17:0,93,1082	0/0:5,0:4:12.04:0,12,160
chr10	86597366	.	C	CA	383	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.545;DP=564;FS=3.728;HRun=8;HaplotypeScore=61.4226;InbreedingCoeff=0.6723;MQ=64.94;MQ0=18;MQRankSum=-0.549;QD=18.24;ReadPosRankSum=-0.845;VQSLOD=3.3802;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.02:0,45,412	0/0:6,0:6:18.01:0,18,165	0/0:51,0:17:11.51:0,12,232	0/0:57,0:16:17.36:0,17,164	0/0:25,0:25:71.98:0,72,641	0/0:15,1:16:3.43:0,3,273	0/0:17,0:17:48.03:0,48,439	0/0:31,0:31:49.35:0,49,625	0/0:14,0:14:35.96:0,36,317	0/0:28,0:28:72.04:0,72,657	0/0:19,0:19:48.02:0,48,435	0/0:12,0:12:33.02:0,33,302	0/0:10,0:10:30.01:0,30,273	0/0:12,0:12:30.01:0,30,274	0/0:10,0:10:30.02:0,30,275	0/0:13,0:13:39:0,39,351	0/0:15,0:15:24.01:0,24,219	1/1:18,3:21:49.82:477,50,0	0/0:23,0:19:50.97:0,51,458	0/0:30,0:29:83.74:0,84,739	0/0:13,1:12:1.63:0,2,268	0/0:21,0:21:63.01:0,63,570	0/0:15,0:15:39.02:0,39,357	0/0:6,0:6:12:0,12,109	0/0:20,0:20:54.03:0,54,494	0/0:23,0:23:66:0,66,594	0/0:31,0:31:74.20:0,74,727	0/0:7,0:6:18.01:0,18,165
chr10	86598365	.	A	AC	292.56	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.506;DP=554;FS=0.000;HRun=0;HaplotypeScore=56.2725;InbreedingCoeff=0.9598;MQ=75.33;MQ0=0;MQRankSum=-0.608;QD=22.50;ReadPosRankSum=-1.435;VQSLOD=4.5802;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.22:0,81,1036	0/0:4,0:4:12.04:0,12,167	0/0:14,0:10:23.85:0,24,264	0/0:15,0:14:18.40:0,18,218	0/0:30,0:30:79.97:0,80,1065	0/0:17,0:17:51.16:0,51,696	0/0:23,0:23:66.07:0,66,841	0/0:23,0:23:61.90:0,62,797	0/0:12,0:12:36.10:0,36,470	0/0:22,0:22:62.40:0,62,800	0/0:16,0:16:48.11:0,48,573	0/0:19,0:19:50.49:0,50,601	0/0:15,0:15:42.10:0,42,564	0/0:19,0:19:57.17:0,57,761	0/0:12,0:12:33.08:0,33,413	0/0:26,0:26:75.19:0,75,966	0/0:34,0:34:99:0,99,1255	1/1:4,9:13:32.87:387,33,0	0/0:27,0:27:75.13:0,75,901	0/0:30,0:30:90.16:0,90,1137	0/0:15,0:15:45.11:0,45,567	0/0:16,0:16:48.14:0,48,626	0/0:19,0:19:49.89:0,50,678	0/0:28,0:28:84.27:0,84,1152	0/0:24,0:24:72.14:0,72,949	0/0:22,0:22:66.09:0,66,808	0/0:23,0:22:66.07:0,66,809	0/0:9,0:9:26.99:0,27,336
chr10	86598389	.	AG	A	324.28	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.808;DP=600;FS=0.000;HRun=1;HaplotypeScore=56.9894;InbreedingCoeff=0.7726;MQ=83.10;MQ0=0;MQRankSum=-2.262;QD=29.48;ReadPosRankSum=-0.857;VQSLOD=3.0160;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.29:0,84,1343	0/0:3,0:3:9.03:0,9,142	0/0:21,0:21:60.20:0,60,940	0/0:13,1:15:1.10:0,1,565	0/0:31,0:31:93.30:0,93,1460	0/0:26,0:26:75.26:0,75,1193	0/0:25,0:25:66.22:0,66,1053	0/0:28,0:28:84.27:0,84,1294	0/0:13,0:13:39.12:0,39,601	0/0:23,0:23:69.23:0,69,1084	0/0:18,0:18:54.18:0,54,855	0/0:20,0:20:51.17:0,51,811	0/0:15,0:15:42.14:0,42,668	0/0:18,0:18:54.18:0,54,863	0/0:19,0:19:54.18:0,54,863	0/0:27,0:27:75.26:0,75,1199	0/0:34,0:34:93.29:0,93,1439	1/1:0,11:11:30.10:418,30,0	0/0:31,0:31:90.28:0,90,1384	0/0:31,0:31:93.32:0,93,1485	0/0:15,0:15:45.15:0,45,720	0/0:11,0:11:33.10:0,33,505	0/0:19,0:19:57.19:0,57,894	0/0:23,0:23:69.22:0,69,1079	0/0:30,0:30:90.31:0,90,1439	0/0:27,0:27:81.25:0,81,1250	0/0:29,0:28:87.30:0,87,1389	0/0:8,0:8:24.08:0,24,384
chr10	86599935	.	TA	T	4634.20	PASS	AB=0.749;AC=25;AF=0.463;AN=54;BaseQRankSum=10.342;DP=474;FS=13.162;HRun=11;HaplotypeScore=59.4108;InbreedingCoeff=0.7893;MQ=67.91;MQ0=3;MQRankSum=-1.354;QD=16.98;ReadPosRankSum=1.625;VQSLOD=4.8925;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,25:32:82.90:670,83,0	1/1:1,4:6:14.02:104,14,0	0/1:17,0:11:4.93:5,0,74	./.	0/0:23,0:23:32.69:0,33,541	0/0:17,0:17:39.07:0,39,399	0/0:10,0:10:24.05:0,24,248	1/1:7,24:31:71.86:587,72,0	0/0:10,0:10:27:0,27,264	1/1:6,14:19:38.92:318,39,0	1/1:2,14:16:41.94:345,42,0	0/0:16,0:17:44.95:0,45,447	0/0:11,0:11:27.02:0,27,274	0/0:13,0:13:33.08:0,33,345	0/0:14,0:14:32.71:0,33,304	0/0:15,0:15:33.08:0,33,352	1/1:2,38:41:99:964,119,0	0/1:5,0:10:13.36:13,0,20	1/1:8,17:25:21.92:383,22,0	1/1:4,15:19:38.81:313,39,0	0/1:3,7:11:43.25:101,0,43	0/0:7,0:7:15.04:0,15,160	0/0:11,0:11:27.07:0,27,287	0/0:12,0:12:27.07:0,27,285	0/0:23,0:23:63.11:0,63,639	1/1:3,14:16:41.95:345,42,0	1/1:1,14:15:44.91:365,45,0	1/1:4,7:11:14.93:122,15,0
chr10	86599949	.	C	CTG	1747.68	PASS	AB=0.907;AC=12;AF=0.222;AN=54;BaseQRankSum=0.018;DP=484;FS=4.501;HRun=0;HaplotypeScore=87.8905;InbreedingCoeff=0.3837;MQ=61.52;MQ0=8;MQRankSum=-0.573;QD=10.16;ReadPosRankSum=-1.716;VQSLOD=2.9752;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,1:37:14.60:0,15,408	0/0:6,0:6:15.49:0,15,153	0/1:24,0:9:0:0,0,0	./.	0/0:20,0:22:35.15:0,35,368	0/1:14,0:19:13.52:14,0,272	0/0:13,0:13:21.04:0,21,231	0/1:26,7:33:30.57:358,0,31	0/0:9,0:9:18.03:0,18,196	0/0:17,0:18:32.83:0,33,322	0/0:20,0:20:27.02:0,27,276	0/0:16,0:16:20.95:0,21,204	0/0:10,0:10:0.94:0,1,91	0/0:12,0:12:21.06:0,21,242	0/0:11,0:11:24:0,24,260	0/0:15,0:15:17.59:0,18,144	0/0:46,0:49:96.59:0,97,1129	0/0:11,0:11:11.53:0,12,76	0/1:21,2:21:5.19:165,0,5	0/1:15,2:16:36.98:184,0,37	1/1:10,2:12:6.45:218,6,0	0/0:5,0:6:8.86:0,9,83	0/0:11,0:11:20.91:0,21,209	0/0:16,0:16:30.06:0,30,325	0/0:20,0:21:41.90:0,42,430	0/1:15,5:19:22.41:336,0,22	1/1:11,5:16:30.06:388,30,0	1/1:4,4:8:20.40:241,20,0
chr10	86599970	.	TGTGTGC	T	166.06	PASS	AB=0.846;AC=2;AF=0.036;AN=56;BaseQRankSum=3.355;DP=446;FS=0.000;HRun=0;HaplotypeScore=109.2418;InbreedingCoeff=-0.0411;MQ=58.52;MQ0=6;MQRankSum=-2.703;QD=5.93;ReadPosRankSum=-0.888;VQSLOD=1.7915;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.19:0,78,1959	0/0:6,0:6:18.06:0,18,564	0/0:17,0:6:4.37:0,4,135	0/1:19,0:10:7.22:7,0,89	0/0:18,0:18:48.04:0,48,1277	0/0:19,0:19:45.05:0,45,1176	0/0:17,0:17:45.01:0,45,1057	0/0:25,0:25:69.03:0,69,1397	0/0:13,0:13:39.09:0,39,968	0/0:16,0:16:48.07:0,48,1275	0/0:18,0:18:47.92:0,48,1022	0/0:11,0:11:33.03:0,33,818	0/0:7,0:7:18.50:0,19,451	0/0:9,0:9:24.07:0,24,790	0/0:12,0:12:32.98:0,33,840	0/0:9,0:9:24.06:0,24,592	0/0:51,0:51:99:0,144,4056	0/1:5,4:9:88.85:240,0,89	0/0:15,0:14:30.80:0,31,839	0/0:13,0:12:30.08:0,30,713	0/0:17,0:17:41.88:0,42,652	0/0:4,0:4:12.04:0,12,373	0/0:14,0:14:39:0,39,875	0/0:19,0:18:54.06:0,54,1469	0/0:23,0:23:69.14:0,69,1829	0/0:17,0:17:45.04:0,45,1186	0/0:11,0:11:33.11:0,33,901	0/0:9,0:9:24.01:0,24,555
chr10	86600698	.	C	CAGAT	2694.75	PASS	AB=0.867;AC=13;AF=0.260;AN=50;BaseQRankSum=-8.784;DP=587;FS=2.209;HRun=0;HaplotypeScore=108.3075;InbreedingCoeff=0.2209;MQ=59.71;MQ0=4;MQRankSum=3.213;QD=12.19;ReadPosRankSum=-0.425;VQSLOD=3.3561;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:21:6.01:0,6,56	0/0:6,0:11:6.01:0,6,56	./.	./.	0/0:37,0:37:39.13:0,39,586	1/1:15,14:28:30.10:695,30,0	0/1:14,0:15:36.65:37,0,64	./.	1/1:7,9:16:12.04:278,12,0	0/0:15,0:25:24.03:0,24,223	0/0:17,0:24:9.90:0,10,85	0/0:6,0:15:12.01:0,12,112	0/0:18,0:18:33.11:0,33,495	0/0:14,0:14:24.06:0,24,342	0/0:21,0:20:39.12:0,39,570	0/0:22,0:22:36.11:0,36,520	0/0:20,0:24:9.01:0,9,84	0/0:19,0:19:24.08:0,24,351	0/0:18,0:17:12.04:0,12,182	0/1:33,0:33:12.48:12,0,611	0/0:7,0:7:9.03:0,9,136	0/1:11,7:17:66.79:326,0,67	0/1:16,10:28:25.10:396,0,25	0/1:9,0:9:11.65:12,0,119	0/0:31,0:32:60.20:0,60,888	0/1:14,14:30:7.72:861,0,8	0/1:31,1:32:27.32:27,0,542	1/1:5,4:10:9.03:208,9,0
chr10	86602842	.	C	CT	591.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.123;DP=650;FS=0.999;HRun=0;HaplotypeScore=74.3635;InbreedingCoeff=0.9446;MQ=66.90;MQ0=3;MQRankSum=0.544;QD=34.80;ReadPosRankSum=0.841;VQSLOD=3.1985;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.23:0,96,1183	0/0:10,0:10:30.10:0,30,413	0/0:27,0:25:72.18:0,72,946	0/0:27,0:24:66.21:0,66,897	0/0:20,0:20:48.16:0,48,663	0/0:24,0:24:72.24:0,72,1007	0/0:20,0:20:60.20:0,60,839	0/0:22,0:22:66.19:0,66,877	0/0:36,0:36:99:0,105,1464	0/0:22,0:22:66.22:0,66,919	0/0:17,0:17:45.15:0,45,625	0/0:30,0:30:87.29:0,87,1216	0/0:26,0:26:78.20:0,78,1036	0/0:26,0:26:75.24:0,75,1032	0/0:29,0:29:84.27:0,84,1157	0/0:31,0:31:93.30:0,93,1283	0/0:21,0:21:60.20:0,60,839	1/1:1,16:17:45.11:686,45,0	0/0:22,0:22:63.21:0,63,878	0/0:18,0:18:54.18:0,54,743	0/0:44,0:44:99:0,126,1745	0/0:22,0:22:57.19:0,57,794	0/0:11,0:11:33.11:0,33,458	0/0:20,0:20:60.19:0,60,818	0/0:17,0:17:51.17:0,51,710	0/0:25,0:25:75.25:0,75,1049	0/0:29,0:29:84.28:0,84,1165	0/0:4,0:4:9.03:0,9,126
chr10	86603800	.	TG	T	917.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.374;DP=728;FS=9.544;HRun=2;HaplotypeScore=73.2439;InbreedingCoeff=0.9993;MQ=79.63;MQ0=0;MQRankSum=-3.874;QD=28.67;ReadPosRankSum=0.774;VQSLOD=2.2489;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:32:78.25:1012,78,0	0/0:11,0:11:33.11:0,33,493	0/0:25,0:25:71.26:0,71,1000	0/0:17,0:18:35.44:0,35,508	0/0:39,0:39:99:0,117,1732	0/0:21,0:21:63.20:0,63,923	0/0:22,0:22:66.21:0,66,970	0/0:30,0:29:84.27:0,84,1239	0/0:34,0:34:99:0,99,1479	0/0:29,0:29:81.27:0,81,1214	0/0:18,0:18:51.17:0,51,762	0/0:24,0:24:72.24:0,72,1074	0/0:25,0:25:75.25:0,75,1124	0/0:25,0:25:72.24:0,72,1079	0/0:36,0:36:99:0,102,1524	0/0:30,0:30:87.29:0,87,1302	0/0:26,0:26:72.24:0,72,1078	0/0:20,0:20:57.19:0,57,851	0/0:18,0:18:54.18:0,54,800	0/0:31,0:31:93.29:0,93,1371	0/0:42,0:42:99:0,126,1860	0/0:22,0:22:66.21:0,66,966	0/0:23,0:23:69.20:0,69,984	0/0:29,0:29:84.27:0,84,1236	0/0:28,0:28:81.25:0,81,1159	0/0:25,0:25:69.16:0,69,1005	0/0:34,0:34:99:0,99,1478	0/0:11,0:11:33.11:0,33,493
chr10	86603854	.	AG	A	833.87	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.101;DP=657;FS=6.406;HRun=3;HaplotypeScore=68.9724;InbreedingCoeff=0.9985;MQ=81.24;MQ0=0;MQRankSum=-3.290;QD=23.82;ReadPosRankSum=0.048;VQSLOD=2.6157;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:35:75.21:929,75,0	0/0:10,0:10:30.10:0,30,431	0/0:26,0:26:64.95:0,65,1000	0/0:20,0:20:47.61:0,48,696	0/0:26,0:26:78.24:0,78,1101	0/0:17,0:17:51.17:0,51,734	0/0:16,0:16:45.11:0,45,623	0/0:34,0:34:99:0,99,1426	0/0:34,0:34:99:0,102,1460	0/0:36,0:36:99:0,105,1493	0/0:26,0:26:78.26:0,78,1122	0/0:24,0:24:69.22:0,69,969	0/0:22,0:22:60.20:0,60,862	0/0:27,0:27:78.26:0,78,1123	0/0:32,0:32:96.26:0,96,1323	0/0:20,0:20:60.16:0,60,841	0/0:21,0:21:63.21:0,63,907	0/0:12,0:12:36.08:0,36,495	0/0:13,0:13:33.11:0,33,475	0/0:34,0:34:87.29:0,87,1253	0/0:25,0:25:75.25:0,75,1079	0/0:31,0:31:90.29:0,90,1278	0/0:15,0:15:45.14:0,45,629	0/0:20,0:20:54.18:0,54,776	0/0:13,0:13:39.13:0,39,561	0/0:28,0:28:81.27:0,81,1166	0/0:30,0:30:90.30:0,90,1288	0/0:10,0:10:30.10:0,30,430
chr10	86604002	.	TTGTGTGTGTGTGTG	T	5273.35	PASS	AB=0.783;AC=21;AF=0.389;AN=54;BaseQRankSum=7.501;DP=553;FS=7.909;HRun=0;HaplotypeScore=187.4757;InbreedingCoeff=0.6203;MQ=59.33;MQ0=21;MQRankSum=-5.590;QD=21.01;ReadPosRankSum=0.125;VQSLOD=3.3232;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:17.93:91,0,18	1/1:3,11:14:8.55:651,9,0	./.	0/0:30,0:12:6.01:0,6,66	0/0:17,0:17:14.01:0,14,753	0/0:9,0:18:15.04:0,15,397	0/0:19,0:19:15.45:0,15,124	1/1:22,0:21:4.08:73,4,0	0/0:23,0:21:25.89:0,26,1364	0/1:19,11:30:40.67:367,0,41	1/1:10,10:20:12:373,12,0	0/0:14,0:15:12.45:0,12,471	0/0:13,0:15:29.65:0,30,1165	0/0:9,0:9:12.01:0,12,620	0/0:23,0:22:18.03:0,18,634	0/0:14,0:13:24.04:0,24,590	0/1:13,19:32:4.95:31,0,5	1/1:15,4:18:3.56:390,4,0	1/1:12,0:11:11.97:170,12,0	1/1:10,11:21:11.45:545,11,0	0/0:23,0:22:9.52:0,10,297	0/0:15,0:14:27.05:0,27,1136	0/0:15,0:15:27.01:0,27,750	0/0:14,0:30:24.07:0,24,728	0/0:20,0:19:24.04:0,24,866	1/1:12,12:24:33.26:767,33,0	1/1:8,15:24:8.20:1131,8,0	1/1:7,7:14:0.08:685,0,0
chr10	86604132	.	C	CTT	737.05	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.217;DP=568;FS=3.813;HRun=11;HaplotypeScore=81.3488;InbreedingCoeff=0.8367;MQ=66.47;MQ0=16;MQRankSum=-0.688;QD=18.43;ReadPosRankSum=-1.217;VQSLOD=2.7087;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:22:36.12:521,36,0	0/0:3,0:4:8.75:0,9,70	0/0:47,0:26:31.83:0,32,274	0/0:43,0:17:31.18:0,31,248	0/0:28,0:29:61.07:0,61,579	0/0:19,0:21:38.73:0,39,405	0/0:11,0:11:17.97:0,18,174	0/0:24,0:23:1.32:0,1,193	0/0:15,0:16:34.99:0,35,309	0/0:27,0:28:68.71:0,69,627	0/0:14,0:15:35.63:0,36,308	0/0:15,0:17:32.69:0,33,302	0/0:9,0:9:11.90:0,12,110	0/0:7,0:7:11.96:0,12,116	0/0:20,0:20:41.96:0,42,401	0/0:12,0:12:26.97:0,27,250	0/0:28,0:27:59.94:0,60,563	1/1:3,13:18:27.05:337,27,0	0/0:19,0:18:48:0,48,445	0/0:23,0:23:50.93:0,51,481	0/0:11,0:11:17.99:0,18,174	0/0:18,0:19:44.75:0,45,414	0/0:24,0:24:53.75:0,54,489	0/0:22,0:22:41.98:0,42,407	0/0:16,0:16:36:0,36,338	0/0:26,0:27:56.71:0,57,518	0/0:19,0:19:42:0,42,407	0/0:14,0:13:30.03:0,30,287
chr10	86604855	.	CA	C	872.14	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.536;DP=535;FS=1.611;HRun=3;HaplotypeScore=49.9538;InbreedingCoeff=0.8831;MQ=83.30;MQ0=0;MQRankSum=-2.913;QD=28.13;ReadPosRankSum=1.156;VQSLOD=2.7661;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:78.24:967,78,0	0/0:4,0:4:6.02:0,6,86	0/0:18,0:18:51.14:0,51,688	0/0:13,0:13:12.66:0,13,440	0/0:33,0:33:99:0,99,1409	0/0:15,0:15:45.15:0,45,645	0/0:12,0:12:36.09:0,36,481	0/0:27,0:27:78.26:0,78,1106	0/0:12,0:12:36.08:0,36,462	0/0:24,0:24:66.22:0,66,945	0/0:15,0:15:42.14:0,42,603	0/0:19,0:19:57.18:0,57,798	0/0:24,0:24:72.24:0,72,1022	0/0:18,0:18:51.16:0,51,716	0/0:26,0:26:78.25:0,78,1105	0/0:12,0:12:36.12:0,36,516	0/0:28,0:28:81.23:0,81,1139	0/0:15,0:15:39.13:0,39,554	0/0:13,0:13:36.11:0,36,501	0/0:29,0:29:87.29:0,87,1248	0/0:19,0:19:57.17:0,57,802	0/0:16,0:16:42.14:0,42,605	0/0:17,0:17:51.15:0,51,708	0/0:18,0:18:54.18:0,54,774	0/0:14,0:14:42.14:0,42,605	0/0:21,0:21:63.21:0,63,908	0/0:23,0:23:69.23:0,69,994	0/0:19,0:19:57.19:0,57,801
chr10	86606235	.	C	CG	686.09	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.938;DP=471;FS=8.211;HRun=0;HaplotypeScore=51.7697;InbreedingCoeff=0.9844;MQ=57.98;MQ0=10;MQRankSum=0.131;QD=28.59;ReadPosRankSum=0.738;VQSLOD=3.3482;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:51.09:781,51,0	0/0:7,0:7:21.07:0,21,294	0/0:31,0:12:36.12:0,36,504	0/0:31,0:14:36.49:0,36,487	0/0:16,0:16:48.16:0,48,671	0/0:9,0:9:27.09:0,27,377	0/0:10,0:10:30.10:0,30,420	0/0:25,0:25:69.23:0,69,964	0/0:15,0:15:22.07:0,22,559	0/0:16,0:15:48.16:0,48,669	0/0:13,0:13:39.13:0,39,545	0/0:21,0:21:63.21:0,63,881	0/0:11,0:11:33.11:0,33,461	0/0:13,0:13:36.12:0,36,503	0/0:26,0:26:78.26:0,78,1091	0/0:17,0:17:45.15:0,45,628	0/0:27,0:27:69.23:0,69,963	0/0:13,0:13:36.12:0,36,503	0/0:15,0:12:36.12:0,36,497	0/0:13,0:13:33.11:0,33,460	0/0:10,0:10:24.08:0,24,336	0/0:20,0:20:60.20:0,60,838	0/0:9,0:9:27.09:0,27,378	0/0:10,0:10:24.08:0,24,336	0/0:21,0:20:63.21:0,63,880	0/0:27,0:27:75.25:0,75,1046	0/0:10,0:10:30.10:0,30,420	0/0:11,0:11:33.11:0,33,462
chr10	86606817	.	TCACACACACACA	T	858.93	PASS	AB=1.000;AC=17;AF=0.327;AN=52;BaseQRankSum=5.518;DP=423;FS=6.627;HRun=0;HaplotypeScore=133.3338;InbreedingCoeff=0.5133;MQ=63.41;MQ0=7;MQRankSum=-4.197;QD=4.96;ReadPosRankSum=-0.962;VQSLOD=1.6131;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:29:3.70:4,0,62	1/1:5,3:8:6.49:142,6,0	./.	./.	0/0:16,0:16:12.04:0,12,435	0/0:8,0:9:9.03:0,9,310	0/0:18,0:20:24.08:0,24,886	0/0:24,0:24:6.91:0,7,109	0/0:9,0:8:9.03:0,9,263	1/1:13,2:14:6:125,6,0	1/1:11,3:14:6.02:204,6,0	0/0:6,0:6:6.02:0,6,220	0/0:8,0:8:9.03:0,9,338	0/0:2,0:3:3.01:0,3,116	0/0:17,0:16:30.10:0,30,1042	0/0:7,0:8:9.50:0,10,304	1/1:17,5:21:5.71:204,6,0	1/1:10,0:20:5.89:167,6,0	0/1:7,0:7:5.96:6,0,42	1/1:12,0:13:3.01:44,3,0	0/1:24,0:23:3.53:35,0,4	0/0:10,0:9:6.02:0,6,219	0/0:6,0:9:6.02:0,6,234	0/0:23,0:25:30.10:0,30,1036	0/0:22,0:25:42.62:0,43,1471	0/0:18,0:18:13.28:0,13,291	1/1:16,0:20:5.64:87,6,0	0/0:7,0:6:6.02:0,6,88
chr10	86606944	.	A	AATAT	785.10	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=3.947;DP=477;FS=0.000;HRun=0;HaplotypeScore=77.8399;InbreedingCoeff=0.9629;MQ=64.87;MQ0=0;MQRankSum=0.011;QD=21.22;ReadPosRankSum=1.769;VQSLOD=3.0776;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,12:16:27.09:666,27,0	0/0:9,0:9:27.09:0,27,481	0/0:10,0:10:8.61:0,9,160	./.	0/0:27,0:27:69.24:0,69,1200	0/0:17,0:17:51.13:0,51,821	0/0:12,0:12:30.07:0,30,502	0/0:33,0:33:84.28:0,84,1435	0/0:17,0:17:45.15:0,45,801	0/0:21,0:21:63.20:0,63,1070	0/0:17,0:17:45.15:0,45,801	0/0:13,0:13:39.13:0,39,694	0/0:18,0:18:48.16:0,48,846	0/0:12,0:12:27.09:0,27,480	0/0:20,0:20:54.18:0,54,961	0/0:14,0:14:42.14:0,42,747	0/0:27,0:27:72.21:0,72,1248	1/1:2,0:21:50.55:240,51,0	0/0:17,0:17:45.11:0,45,728	0/0:14,0:14:42.10:0,42,688	0/0:14,0:14:33.11:0,33,560	0/0:8,0:8:21.04:0,21,312	0/0:15,0:15:42.13:0,42,719	0/0:11,0:11:24.08:0,24,427	0/0:18,0:18:51.17:0,51,908	0/0:28,0:28:81.28:0,81,1440	0/0:30,0:30:84.27:0,84,1467	0/0:14,0:14:30.07:0,30,475
chr10	86610460	.	C	CA	448.51	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=0.195;DP=656;FS=5.846;HRun=9;HaplotypeScore=69.8282;InbreedingCoeff=0.6499;MQ=65.41;MQ0=7;MQRankSum=-1.272;QD=12.46;ReadPosRankSum=-3.210;VQSLOD=2.6129;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:64.99:0,65,547	0/0:9,0:9:23.99:0,24,208	0/0:39,0:25:24.72:0,25,210	0/0:27,0:11:20.21:0,20,136	0/0:30,0:31:85.99:0,86,729	0/0:23,0:22:50.01:0,50,423	0/1:8,0:8:15.06:15,0,112	0/0:40,0:40:64.76:0,65,593	0/0:19,0:19:43.17:0,43,387	0/0:42,0:41:98.96:0,99,857	0/0:19,0:19:41.96:0,42,361	0/0:17,0:18:50.03:0,50,423	0/0:17,0:17:50.99:0,51,443	0/0:18,0:18:50.99:0,51,442	0/0:29,0:29:80.96:0,81,698	0/0:19,0:19:50.98:0,51,440	0/0:24,0:24:62.02:0,62,527	1/1:5,23:28:29.91:538,30,0	0/0:21,0:20:34.77:0,35,310	0/0:28,0:28:71.96:0,72,621	0/0:15,0:15:35.98:0,36,312	0/0:15,0:15:41.99:0,42,364	0/0:20,0:20:50.95:0,51,436	0/0:29,0:29:77.97:0,78,676	0/0:26,0:26:74.98:0,75,651	0/0:32,0:29:74.97:0,75,651	0/0:24,0:24:71.99:0,72,624	0/0:9,0:9:26.99:0,27,234
chr10	86611082	.	T	TATAAGCTACATTCATC	1519.06	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.195;DP=551;FS=12.250;HRun=0;HaplotypeScore=228.7519;InbreedingCoeff=0.9643;MQ=76.98;MQ0=0;MQRankSum=-4.183;QD=168.78;ReadPosRankSum=1.963;VQSLOD=2.3128;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.19:0,60,2611	0/0:10,0:10:27.08:0,27,1043	0/0:16,0:16:45.15:0,45,1710	0/0:12,0:12:30.10:0,30,1219	0/0:37,0:37:99:0,108,4214	0/0:26,0:26:72.25:0,72,2997	0/0:16,0:16:39.13:0,39,1569	0/0:29,0:29:72.25:0,72,2973	0/0:14,0:14:39.13:0,39,1721	0/0:36,0:36:99:0,105,4234	0/0:32,0:32:75.10:0,75,2848	0/0:22,0:22:57.20:0,57,2444	0/0:21,0:21:57.18:0,57,2305	0/0:18,0:18:54.19:0,54,2340	0/0:21,0:21:54.19:0,54,2427	0/0:17,0:17:45.15:0,45,1980	0/0:20,0:20:54.19:0,54,2438	1/1:4,3:9:21.07:1611,21,0	0/0:17,0:17:48.16:0,48,1991	0/0:23,0:23:66.18:0,66,2649	0/0:12,0:12:36.12:0,36,1501	0/0:13,0:13:33.11:0,33,1469	0/0:20,0:20:60.21:0,60,2451	0/0:14,0:14:42.08:0,42,1563	0/0:21,0:21:60.21:0,60,2573	0/0:30,0:30:87.30:0,87,3805	0/0:18,0:18:51.16:0,51,2028	0/0:4,0:4:12.04:0,12,559
chr10	86611190	.	C	CT	1108.87	PASS	AB=0.711;AC=11;AF=0.196;AN=56;BaseQRankSum=-1.533;DP=594;FS=9.958;HRun=13;HaplotypeScore=69.3813;InbreedingCoeff=0.4225;MQ=57.32;MQ0=3;MQRankSum=-1.891;QD=7.34;ReadPosRankSum=0.282;VQSLOD=1.6440;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,14:29:49.02:136,0,49	0/1:5,9:14:11.13:193,0,11	0/1:11,1:9:19.77:20,0,64	0/0:10,0:6:8.91:0,9,61	0/0:33,1:37:37.88:0,38,384	0/0:21,0:21:47.06:0,47,316	0/0:14,1:19:2.99:0,3,148	0/0:38,1:39:33.43:0,33,366	0/0:21,0:22:53.46:0,53,357	0/1:8,19:30:1.91:369,0,2	1/1:11,22:35:31.78:302,32,0	0/0:13,0:15:24.77:0,25,154	0/0:21,0:23:42.26:0,42,268	0/0:17,0:17:20.72:0,21,143	0/0:20,0:20:38.20:0,38,256	0/0:20,1:21:22.72:0,23,299	1/1:6,13:21:26.67:216,27,0	1/1:3,0:3:2.97:20,3,0	0/0:21,0:23:35.77:0,36,221	0/0:26,0:28:45.21:0,45,310	0/0:22,0:23:55.53:0,56,376	0/0:16,0:17:25.70:0,26,169	0/0:18,1:21:14.86:0,15,230	0/0:11,0:11:20.78:0,21,144	0/0:16,0:17:31.67:0,32,210	0/0:28,0:29:21.68:0,22,285	0/0:28,1:29:40.55:0,41,422	0/1:5,1:6:9.97:10,0,85
chr10	86611308	.	GGA	G	4385.35	PASS	AC=46;AF=0.920;AN=50;BaseQRankSum=0.985;DP=166;FS=17.712;HRun=0;HaplotypeScore=70.6690;InbreedingCoeff=0.5313;MQ=44.18;MQ0=7;MQRankSum=0.749;QD=32.01;ReadPosRankSum=2.377;VQSLOD=5.5369;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,3:3:3.01:39,3,0	1/1:0,3:3:9.03:117,9,0	0/0:10,0:1:3.01:0,3,61	0/0:14,0:5:11.36:0,11,93	1/1:1,5:6:18.04:217,18,0	1/1:0,7:7:21.07:277,21,0	1/1:1,3:4:12.02:143,12,0	./.	1/1:1,3:3:9.03:128,9,0	1/1:1,5:5:15.04:170,15,0	1/1:1,11:12:30.10:405,30,0	1/1:1,3:4:9.03:120,9,0	1/1:1,6:7:18.06:237,18,0	1/1:0,6:5:15.05:200,15,0	1/1:1,8:8:24.07:305,24,0	1/1:1,7:8:24.07:301,24,0	1/1:0,3:3:9.03:117,9,0	1/1:2,1:3:5.99:61,6,0	1/1:0,2:1:3.01:36,3,0	1/1:1,5:6:12.04:156,12,0	1/1:0,2:2:6.02:79,6,0	1/1:0,9:9:24.08:323,24,0	1/1:0,4:3:9.03:120,9,0	./.	1/1:1,4:5:15.04:184,15,0	1/1:0,11:9:27.08:317,27,0	1/1:5,7:11:27.04:335,27,0	./.
chr10	86611311	.	T	TC	2193.13	PASS	AC=46;AF=0.920;AN=50;BaseQRankSum=-0.171;DP=150;FS=0.000;HRun=1;HaplotypeScore=80.6706;InbreedingCoeff=0.4192;MQ=43.97;MQ0=9;MQRankSum=-1.407;QD=17.83;ReadPosRankSum=2.676;VQSLOD=3.9484;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,3:3:2.99:23,3,0	1/1:0,3:3:8.98:74,9,0	0/0:10,0:1:3.01:0,3,32	0/0:11,0:3:4.56:0,5,34	1/1:0,5:5:14.59:97,15,0	1/1:0,7:7:20.82:156,21,0	1/1:0,3:3:8.97:70,9,0	./.	1/1:1,3:3:8.91:66,9,0	1/1:0,5:4:12.01:108,12,0	1/1:0,11:11:26.45:170,26,0	1/1:0,3:3:8.88:62,9,0	1/1:0,6:6:17.84:131,18,0	1/1:0,6:5:14.85:109,15,0	1/1:0,8:7:20.71:146,21,0	1/1:0,7:7:20.84:162,21,0	1/1:0,3:3:8.98:72,9,0	1/1:2,1:3:0.29:24,0,0	1/1:0,2:1:3:27,3,0	1/1:0,5:5:8.88:61,9,0	1/1:0,2:2:5.92:42,6,0	1/1:1,8:9:23.77:173,24,0	1/1:0,4:3:8.87:61,9,0	./.	1/1:0,4:4:11.87:84,12,0	1/1:0,11:9:26.95:226,27,0	1/1:1,7:7:20.84:157,21,0	./.
chr10	86611315	.	TC	T	3870.52	PASS	AC=46;AF=0.920;AN=50;BaseQRankSum=-0.065;DP=145;FS=0.000;HRun=1;HaplotypeScore=70.4022;InbreedingCoeff=0.4637;MQ=44.52;MQ0=7;MQRankSum=-0.991;QD=32.53;ReadPosRankSum=2.010;VQSLOD=3.3605;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:2:3.01:38,3,0	1/1:0,3:3:9.03:115,9,0	0/0:11,0:1:3.01:0,3,48	0/0:11,0:3:4.57:0,5,50	1/1:0,5:5:15.05:191,15,0	1/1:0,7:7:21.06:256,21,0	1/1:0,3:3:9.03:114,9,0	./.	1/1:1,2:3:9.03:107,9,0	1/1:0,5:4:12.04:155,12,0	1/1:0,11:11:27.06:305,27,0	1/1:0,3:3:9.02:103,9,0	1/1:0,6:6:18.05:218,18,0	1/1:0,6:5:15.04:180,15,0	1/1:0,8:7:21.05:245,21,0	1/1:0,7:7:21.06:256,21,0	1/1:0,3:3:9.03:115,9,0	1/1:0,3:3:9.03:123,9,0	1/1:0,2:1:3.01:38,3,0	1/1:0,5:5:9.02:104,9,0	1/1:0,2:2:6.01:66,6,0	1/1:0,8:8:24.07:292,24,0	1/1:0,4:3:9.02:103,9,0	./.	1/1:0,4:4:12.03:142,12,0	1/1:0,11:9:27.09:347,27,0	1/1:0,7:7:21.06:256,21,0	./.
chr10	86612238	.	AT	A	1133.03	PASS	AB=0.917;AC=14;AF=0.250;AN=56;BaseQRankSum=8.456;DP=474;FS=1.015;HRun=13;HaplotypeScore=51.1573;InbreedingCoeff=0.7675;MQ=67.72;MQ0=6;MQRankSum=-1.389;QD=8.33;ReadPosRankSum=2.534;VQSLOD=2.3521;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,22:27:30.47:387,30,0	1/1:1,6:7:5.96:44,6,0	0/0:22,0:9:5.67:0,6,37	0/1:17,0:9:5.34:5,0,15	0/0:29,1:30:44.18:0,44,581	0/0:16,3:19:23.17:0,23,387	0/0:19,0:19:42.04:0,42,398	0/0:17,0:17:30.52:0,31,292	0/0:12,2:14:8.14:0,8,241	1/1:7,13:20:6.54:211,7,0	1/1:1,10:11:26.84:197,27,0	0/0:7,0:8:20.87:0,21,189	0/0:13,0:12:29.79:0,30,259	0/0:18,1:20:26.11:0,26,395	0/0:18,0:18:43.71:0,44,393	0/0:11,0:11:21.03:0,21,204	1/1:8,24:31:56.64:416,57,0	1/1:1,0:11:16.29:47,16,0	0/0:12,0:13:32.28:0,32,265	0/0:23,0:24:44.92:0,45,401	0/0:11,0:11:24.04:0,24,234	0/0:5,0:5:9.01:0,9,88	0/1:8,2:9:3.88:4,0,126	0/0:19,0:18:51.96:0,52,493	0/0:17,0:17:27.32:0,27,400	0/0:27,0:29:68.81:0,69,638	0/0:23,0:23:39.06:0,39,378	0/0:6,0:6:15.02:0,15,146
chr10	86613300	.	GA	G	181.78	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.331;DP=527;FS=0.691;HRun=11;HaplotypeScore=51.2559;InbreedingCoeff=0.9076;MQ=62.39;MQ0=0;MQRankSum=-0.458;QD=6.49;ReadPosRankSum=1.961;VQSLOD=1.2565;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,10:16:12.59:243,13,0	0/0:8,0:8:15.04:0,15,160	0/0:10,0:10:14.62:0,15,127	0/0:9,0:9:17.91:0,18,158	0/0:33,0:34:87.04:0,87,901	0/0:20,1:21:26.48:0,26,481	0/0:9,0:9:24.06:0,24,252	0/0:31,2:33:28.96:0,29,718	0/0:9,0:9:20.95:0,21,207	0/0:25,0:26:59.98:0,60,617	0/0:29,0:29:78.19:0,78,825	0/0:15,1:17:17.29:0,17,374	0/0:15,0:15:36.09:0,36,384	0/0:18,0:18:48.11:0,48,505	0/0:21,1:22:32.45:0,32,539	0/0:16,0:16:39.10:0,39,416	0/0:17,1:20:26.19:0,26,452	1/1:1,0:12:18.33:53,18,0	0/0:16,0:16:39.10:0,39,416	0/0:30,1:31:65.55:0,66,882	0/0:10,0:10:21.05:0,21,224	0/0:19,0:19:45.11:0,45,480	0/0:27,0:27:75.13:0,75,777	0/0:7,0:7:20.97:0,21,209	0/0:20,2:23:7.74:0,8,465	0/0:18,0:18:42.10:0,42,442	0/0:36,1:37:74.38:0,74,912	0/0:14,1:15:17.46:0,17,391
chr10	86614088	.	CTCTT	C	5963.12	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=7.455;DP=421;FS=12.762;HRun=0;HaplotypeScore=66.1878;InbreedingCoeff=0.9482;MQ=61.56;MQ0=5;MQRankSum=-0.687;QD=27.74;ReadPosRankSum=0.785;VQSLOD=3.6400;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,14:19:21.07:360,21,0	1/1:0,7:7:18.06:308,18,0	0/0:21,0:8:23.76:0,24,258	0/0:17,0:7:6.02:0,6,151	0/0:18,0:18:42.14:0,42,966	0/0:21,0:21:48.16:0,48,1165	0/0:5,0:5:15.05:0,15,322	1/1:7,16:23:51.13:775,51,0	0/0:13,0:13:33.11:0,33,696	1/1:9,10:19:30.10:495,30,0	1/1:2,17:19:42.14:702,42,0	0/0:9,0:9:21.03:0,21,428	0/0:14,0:14:33.11:0,33,811	0/0:9,0:9:24.07:0,24,498	0/0:14,0:14:27.09:0,27,584	0/0:10,0:10:30.10:0,30,671	1/1:6,16:21:24.08:396,24,0	1/1:0,4:2:6.02:102,6,0	1/1:6,11:17:33.04:505,33,0	1/1:5,16:21:42.14:677,42,0	1/1:6,8:14:9.03:154,9,0	0/0:11,0:11:21.06:0,21,457	0/0:10,0:10:24.08:0,24,575	0/0:10,0:10:21.07:0,21,511	0/0:24,0:23:57.19:0,57,1307	1/1:2,13:14:36.12:613,36,0	1/1:5,20:25:42.14:720,42,0	1/1:1,7:8:9.03:154,9,0
chr10	86614107	.	CT	C	185.05	PASS	AB=0.667;AC=3;AF=0.054;AN=56;BaseQRankSum=-0.422;DP=432;FS=8.788;HRun=13;HaplotypeScore=70.0569;InbreedingCoeff=0.4237;MQ=54.20;MQ0=16;MQRankSum=-0.036;QD=7.40;ReadPosRankSum=2.167;VQSLOD=2.1389;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,1:15:27.04:0,27,260	0/0:7,0:7:15.01:0,15,139	0/0:21,0:7:3:0,3,28	0/0:14,0:3:5.98:0,6,48	1/1:0,17:16:35.66:256,36,0	0/0:26,0:26:40.20:0,40,505	0/0:7,0:6:6.01:0,6,58	0/0:32,1:30:24.21:0,24,325	0/0:10,0:10:22.28:0,22,207	0/0:13,0:13:24.04:0,24,231	0/0:22,0:23:54.77:0,55,491	0/0:11,1:12:21.03:0,21,204	0/0:13,0:13:33.04:0,33,314	0/0:9,1:9:15.02:0,15,146	0/0:9,0:9:21:0,21,196	0/0:11,0:11:21.03:0,21,204	0/0:22,2:24:15.13:0,15,289	0/1:4,4:4:20.20:35,0,20	0/0:20,1:18:30.05:0,30,290	0/0:21,1:22:29.08:0,29,410	0/0:12,0:12:18.03:0,18,174	0/0:6,0:6:12.02:0,12,117	0/0:11,1:12:5.04:0,5,193	0/0:10,0:11:19.11:0,19,163	0/0:18,1:17:39.06:0,39,380	0/0:14,1:14:33.04:0,33,313	0/0:25,0:24:47.64:0,48,428	0/0:13,0:9:9.01:0,9,86
chr10	86614298	.	C	CTTCT	3594.88	PASS	AB=0.886;AC=26;AF=0.464;AN=56;BaseQRankSum=-1.816;DP=373;FS=9.467;HRun=0;HaplotypeScore=60.6027;InbreedingCoeff=0.6875;MQ=56.33;MQ0=29;MQRankSum=-3.622;QD=16.49;ReadPosRankSum=-1.902;VQSLOD=1.4121;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:12:12.04:233,12,0	1/1:1,4:4:11.90:184,12,0	0/1:15,0:4:1.84:2,0,66	0/1:15,0:4:13.83:14,0,55	0/0:16,0:15:35.95:0,36,474	0/0:15,0:17:36.10:0,36,612	0/0:14,0:13:24.08:0,24,458	0/1:23,1:14:55.08:114,0,55	0/0:6,0:6:15.03:0,15,257	1/1:9,7:15:26.94:408,27,0	0/1:4,6:12:0.15:168,0,0	0/0:10,0:10:18.03:0,18,278	0/0:17,0:17:38.94:0,39,534	0/0:8,0:9:21.03:0,21,339	0/0:16,0:17:42.07:0,42,664	0/0:15,0:14:32.63:0,33,399	1/1:6,6:13:2.35:387,2,0	1/1:3,0:12:15.10:271,15,0	1/1:15,7:16:36.07:719,36,0	1/1:6,5:14:15.01:238,15,0	1/1:8,0:4:5.99:50,6,0	0/0:7,0:7:18.05:0,18,343	0/0:4,0:4:8.95:0,9,105	0/0:4,0:4:9.02:0,9,141	0/0:17,0:16:42.06:0,42,632	1/1:5,13:18:38.97:524,39,0	1/1:1,7:11:9.03:211,9,0	1/1:8,0:7:9.44:72,9,0
chr10	86615109	.	T	TG	6140.44	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-3.694;DP=401;FS=6.730;HRun=1;HaplotypeScore=143.0781;InbreedingCoeff=0.9706;MQ=63.70;MQ0=2;MQRankSum=-12.360;QD=35.49;ReadPosRankSum=-0.876;VQSLOD=3.7418;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,19:24:45.58:649,46,0	1/1:0,3:3:9.03:135,9,0	0/0:13,0:12:18.22:0,18,380	0/0:17,0:12:30.09:0,30,378	0/0:19,0:18:54.18:0,54,700	0/0:24,0:24:72.23:0,72,934	0/0:15,0:15:39.13:0,39,506	1/1:5,26:30:78.11:1123,78,0	0/0:14,0:14:36.12:0,36,467	1/1:3,4:6:15.05:224,15,0	1/1:2,17:19:48.16:716,48,0	0/0:11,0:11:33.11:0,33,428	0/0:17,0:17:51.17:0,51,659	0/0:11,0:11:21.05:0,21,256	0/0:23,0:23:63.18:0,63,789	0/0:8,0:8:24.08:0,24,311	1/1:1,12:13:39.09:558,39,0	1/1:2,4:5:12.01:156,12,0	1/1:1,7:7:21.07:309,21,0	1/1:2,17:18:42.14:628,42,0	1/1:0,5:4:9.03:135,9,0	0/0:9,0:9:27.09:0,27,350	0/0:17,0:17:51.17:0,51,662	0/0:16,0:16:42.12:0,42,529	0/0:14,0:14:39.13:0,39,506	1/1:2,18:19:51.16:745,51,0	1/1:0,14:13:39.13:583,39,0	1/1:0,4:4:12.04:180,12,0
chr10	86615139	.	T	TC	10671.72	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=-1.704;DP=362;FS=0.000;HRun=1;HaplotypeScore=106.4908;InbreedingCoeff=0.5799;MQ=44.45;MQ0=6;MQRankSum=-1.732;QD=30.93;ReadPosRankSum=0.078;VQSLOD=4.4275;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:18:33.11:493,33,0	1/1:1,2:3:9.03:128,9,0	./.	0/0:6,3:2:2.84:0,3,14	1/1:7,11:17:27.09:395,27,0	1/1:3,24:27:57.18:833,57,0	1/1:1,12:13:27.09:404,27,0	1/1:6,20:25:59.84:871,60,0	1/1:0,15:15:39.13:577,39,0	1/1:1,4:4:12.04:179,12,0	1/1:5,13:18:33.11:466,33,0	1/1:4,8:12:21.07:306,21,0	1/1:0,12:12:36.12:538,36,0	1/1:1,11:12:30.10:449,30,0	1/1:2,14:16:39.13:584,39,0	1/1:1,10:11:24.08:359,24,0	1/1:4,12:15:33.11:493,33,0	1/1:4,5:7:8.92:105,9,0	1/1:3,7:8:21.07:309,21,0	1/1:0,15:14:33.11:493,33,0	1/1:1,3:3:9.03:128,9,0	1/1:2,6:8:15.05:217,15,0	1/1:3,13:16:33.11:484,33,0	1/1:1,11:12:27.09:405,27,0	1/1:4,6:10:18.06:270,18,0	1/1:3,15:17:45.11:648,45,0	1/1:3,12:14:24.08:358,24,0	1/1:0,6:6:12.04:179,12,0
chr10	86616894	.	C	CT	930.38	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=5.609;DP=516;FS=3.803;HRun=13;HaplotypeScore=89.8294;InbreedingCoeff=0.6073;MQ=63.80;MQ0=9;MQRankSum=-2.045;QD=5.81;ReadPosRankSum=-2.942;VQSLOD=2.1406;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:23:35.94:221,36,0	1/1:3,1:4:5.96:47,6,0	0/0:34,0:11:4.22:0,4,51	0/1:34,0:14:12.58:13,0,14	0/0:20,0:21:24.54:0,25,157	0/0:23,0:24:26.83:0,27,162	0/0:16,0:17:31.66:0,32,211	0/0:24,0:24:7.92:0,8,167	0/0:8,0:8:5.87:0,6,41	1/1:6,12:18:21.33:312,21,0	1/1:4,8:12:17.50:143,18,0	0/0:14,0:15:12.08:0,12,85	0/0:16,0:17:25.74:0,26,170	0/0:17,0:17:20.63:0,21,142	0/0:17,0:17:20.64:0,21,144	0/0:21,0:21:29.51:0,30,205	1/1:8,16:24:25.84:356,26,0	0/0:15,0:15:8.71:0,9,61	0/0:18,2:20:12.81:0,13,222	0/1:20,0:20:5.66:6,0,119	0/0:9,0:9:14.81:0,15,103	0/0:7,0:8:14.85:0,15,103	0/0:16,0:18:0.55:0,1,110	0/0:15,0:15:23.63:0,24,161	0/0:22,0:22:23.58:0,24,164	0/0:23,1:24:10.70:0,11,218	0/1:20,0:20:1.29:1,0,137	0/0:8,0:8:11.82:0,12,78
chr10	86617243	.	TAA	T	603.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.128;DP=423;FS=7.046;HRun=10;HaplotypeScore=66.3752;InbreedingCoeff=0.6685;MQ=55.63;MQ0=4;MQRankSum=2.092;QD=21.54;ReadPosRankSum=0.913;VQSLOD=2.6383;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.26:0,75,1190	0/0:2,0:2:6.02:0,6,95	0/0:12,0:7:10.85:0,11,135	0/0:10,0:9:20.66:0,21,294	0/0:19,0:19:51.17:0,51,808	0/0:15,0:15:45.15:0,45,706	0/0:16,0:16:42.10:0,42,638	0/0:27,0:26:64.97:0,65,696	0/0:17,0:17:51.17:0,51,809	0/0:20,0:20:51.17:0,51,782	0/0:8,0:7:18.02:0,18,258	0/0:10,0:10:27.05:0,27,398	0/0:10,0:11:32.60:0,33,482	0/0:14,0:15:44.64:0,45,666	0/0:16,0:17:45.11:0,45,668	0/0:11,0:12:35.61:0,36,531	0/0:22,1:22:54.15:0,54,799	1/1:4,24:27:30.71:697,31,0	0/0:20,0:17:48.07:0,48,483	0/0:24,0:24:66.18:0,66,749	0/0:5,0:5:12.03:0,12,128	0/0:1,0:1:3.01:0,3,48	0/0:13,0:13:33.11:0,33,520	0/0:3,0:3:6.02:0,6,95	0/0:11,0:11:30.10:0,30,476	0/0:26,0:26:72.10:0,72,822	0/0:18,1:19:17.43:0,17,485	0/0:13,0:13:39.10:0,39,423
chr10	86622308	.	G	GG	1785.01	PASS	AB=1.000;AC=43;AF=0.977;AN=44;DP=81;FS=0.000;HRun=1;HaplotypeScore=28.0205;InbreedingCoeff=0.0111;MQ=34.18;MQ0=0;QD=22.60;VQSLOD=3.3429;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:3:6.02:78,6,0	./.	./.	./.	1/1:6,0:6:3.01:39,3,0	1/1:5,0:5:12.02:136,12,0	1/1:2,0:2:3.01:39,3,0	1/1:4,4:9:26.96:280,27,0	1/1:4,0:4:12.04:153,12,0	1/1:1,0:1:3.01:40,3,0	1/1:3,0:3:6.02:79,6,0	1/1:5,0:4:11.95:120,12,0	1/1:6,0:6:17.71:179,18,0	1/1:2,0:2:6.02:77,6,0	1/1:2,0:2:6.02:72,6,0	1/1:5,0:4:11.52:120,12,0	1/1:3,0:3:6.02:79,6,0	1/1:1,0:1:3:25,3,0	1/1:5,0:4:9.02:105,9,0	1/1:2,0:2:3.01:39,3,0	./.	1/1:3,0:3:6.01:64,6,0	1/1:2,0:2:3.01:39,3,0	0/1:3,0:3:0:0,0,0	1/1:2,0:2:3.01:39,3,0	1/1:4,0:3:5.97:58,6,0	./.	./.
chr10	86624815	.	CCA	C	638.38	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.352;DP=679;FS=1.882;HRun=0;HaplotypeScore=81.4234;InbreedingCoeff=0.9018;MQ=76.09;MQ0=0;MQRankSum=-2.949;QD=33.60;ReadPosRankSum=0.222;VQSLOD=5.4942;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:57.19:733,57,0	0/0:18,0:18:54.18:0,54,911	0/0:24,0:24:43.08:0,43,861	0/0:24,0:22:48.12:0,48,673	0/0:40,0:40:99:0,108,1800	0/0:17,0:17:48.16:0,48,804	0/0:25,0:25:75.26:0,75,1261	0/0:23,0:23:60.21:0,60,1012	0/0:26,0:26:72.25:0,72,1205	0/0:24,0:24:60.20:0,60,993	0/0:32,0:32:93.30:0,93,1538	0/0:36,0:36:96.30:0,96,1566	0/0:26,0:26:72.25:0,72,1214	0/0:32,0:32:93.32:0,93,1561	0/0:27,1:28:39.66:0,40,1227	0/0:31,0:31:78.27:0,78,1316	0/0:18,0:18:54.18:0,54,911	0/0:10,0:10:21.07:0,21,354	0/0:26,0:26:57.19:0,57,953	0/0:31,0:31:78.27:0,78,1310	0/0:28,0:28:69.23:0,69,1137	0/0:17,0:17:42.13:0,42,676	0/0:27,0:27:66.20:0,66,1080	0/0:21,0:21:51.17:0,51,861	0/0:20,0:20:48.16:0,48,810	0/0:25,1:26:36.64:0,37,1172	0/0:28,0:28:75.25:0,75,1238	0/0:2,0:2:6.02:0,6,101
chr10	86626633	.	C	CT	3787.50	PASS	AB=0.923;AC=20;AF=0.357;AN=56;BaseQRankSum=-1.077;DP=556;FS=15.438;HRun=9;HaplotypeScore=88.2093;InbreedingCoeff=0.6003;MQ=61.06;MQ0=3;MQRankSum=-5.000;QD=12.97;ReadPosRankSum=-3.263;VQSLOD=1.1757;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:35,1:33:26.72:116,27,0	0/0:12,0:12:32.78:0,33,283	0/0:14,0:10:17.86:0,18,145	0/0:7,0:5:14.99:0,15,127	0/0:34,0:34:89.94:0,90,773	0/0:30,0:30:2.69:0,3,408	0/0:12,0:11:32.98:0,33,283	1/1:14,25:39:52.06:752,52,0	0/0:14,0:14:15.28:0,15,266	0/0:19,0:19:27.45:0,27,390	0/0:16,2:18:11.84:0,12,331	0/0:11,0:11:8.49:0,8,209	0/1:10,0:11:10.48:10,0,159	0/0:14,0:14:38.59:0,39,322	0/1:21,0:21:12.55:13,0,287	0/0:16,0:15:27.94:0,28,255	0/0:30,0:30:51.52:0,52,538	1/1:34,0:33:5.36:120,5,0	0/1:15,12:26:14.38:359,0,14	1/1:6,19:25:29.56:657,30,0	1/1:10,4:13:21.02:218,21,0	0/0:2,0:2:3:0,3,26	0/1:9,0:9:16.33:16,0,132	0/0:13,0:13:32.99:0,33,286	0/0:18,0:18:13.95:0,14,264	1/1:6,20:26:7.93:501,8,0	1/1:10,21:31:78.20:854,78,0	1/1:8,10:18:16.76:170,17,0
chr10	86627454	.	G	GCACCCCC	614.19	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.035;DP=475;FS=0.000;HRun=0;HaplotypeScore=109.3086;InbreedingCoeff=0.8341;MQ=84.36;MQ0=0;MQRankSum=-4.638;QD=30.71;ReadPosRankSum=-1.969;VQSLOD=2.4991;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,5:20:21.07:706,21,0	0/0:8,0:8:18.06:0,18,422	0/0:19,0:17:32.93:0,33,668	0/0:21,0:21:30.06:0,30,654	0/0:11,0:11:27.09:0,27,634	0/0:17,0:17:33.11:0,33,736	0/0:27,0:27:75.19:0,75,1662	0/0:23,0:23:36.11:0,36,756	0/0:12,0:12:27.09:0,27,634	0/0:14,0:14:39.11:0,39,867	0/0:10,0:10:24.08:0,24,564	0/0:21,0:21:48.16:0,48,1127	0/0:14,0:14:42.14:0,42,986	0/0:18,0:18:54.19:0,54,1227	0/0:15,0:15:42.14:0,42,984	0/0:29,0:29:72.24:0,72,1691	0/0:29,0:29:78.17:0,78,1684	0/0:14,0:14:39.13:0,39,885	0/0:16,0:16:30.15:0,30,686	0/0:18,0:18:42.13:0,42,940	0/0:19,0:19:51.15:0,51,1147	0/0:11,0:11:30.10:0,30,701	0/0:8,0:8:21.07:0,21,475	0/0:25,0:25:60.20:0,60,1339	0/0:16,0:16:30.10:0,30,704	0/0:18,0:18:48.16:0,48,1127	0/0:21,0:21:57.20:0,57,1339	0/0:1,0:1:2.97:0,3,20
chr10	86629037	.	GCA	G	334.37	PASS	AB=0.902;AC=7;AF=0.125;AN=56;BaseQRankSum=6.223;DP=675;FS=10.059;HRun=0;HaplotypeScore=85.6309;InbreedingCoeff=0.1304;MQ=58.50;MQ0=6;MQRankSum=0.641;QD=2.48;ReadPosRankSum=2.053;VQSLOD=0.9686;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:41:63.05:0,63,681	0/0:8,0:8:18.06:0,18,284	0/0:35,0:20:33.23:0,33,363	0/0:31,0:22:6.74:0,7,318	0/1:22,2:23:14.69:15,0,720	0/0:14,0:14:39.13:0,39,619	0/0:31,0:31:60.15:0,60,900	0/0:29,1:30:12.19:0,12,621	0/1:19,2:22:17.71:18,0,659	0/1:26,2:28:12.07:12,0,696	0/0:18,0:18:39.11:0,39,573	0/0:20,0:20:48.16:0,48,760	0/0:20,1:21:13.31:0,13,733	0/0:20,1:21:15.21:0,15,698	0/0:22,1:23:27.25:0,27,881	0/0:31,0:30:66.22:0,66,1043	0/0:30,1:32:30.89:0,31,1075	1/1:7,14:21:13.92:372,14,0	0/1:15,3:18:28.43:28,0,384	0/0:14,1:15:3.19:0,3,521	0/0:39,2:41:51.30:0,51,1250	0/0:19,0:19:54.14:0,54,800	0/1:19,3:22:20.72:21,0,648	0/0:29,0:29:30.59:0,31,919	0/0:22,0:22:45.15:0,45,713	0/0:24,0:24:57.18:0,57,876	0/0:28,0:25:63.17:0,63,931	0/0:4,0:4:6.02:0,6,96
chr10	86630027	.	C	CT	379.52	PASS	AB=0.899;AC=6;AF=0.107;AN=56;BaseQRankSum=-0.747;DP=621;FS=5.631;HRun=12;HaplotypeScore=77.7315;InbreedingCoeff=0.3851;MQ=64.21;MQ0=13;MQRankSum=-0.650;QD=4.63;ReadPosRankSum=1.225;VQSLOD=1.8011;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,19:28:12.81:358,13,0	0/0:14,0:14:29.80:0,30,219	0/0:20,0:16:5.37:0,5,65	0/0:22,0:14:3.26:0,3,48	0/0:35,1:37:43.60:0,44,454	0/0:21,0:22:52.71:0,53,375	0/0:14,0:14:20.31:0,20,140	0/0:33,1:30:31.71:0,32,375	0/0:14,0:14:29.79:0,30,219	0/0:35,0:36:43.08:0,43,474	0/0:24,0:24:52.27:0,52,376	0/0:18,0:19:32.46:0,32,225	0/0:18,1:19:12.57:0,13,233	0/0:19,0:19:1.55:0,2,156	0/0:20,0:22:34.54:0,35,287	0/0:13,1:14:6.61:0,7,211	0/0:33,3:37:3.59:0,4,478	1/1:14,0:16:18.89:112,19,0	0/0:20,0:19:16.61:0,17,266	0/0:32,0:32:79.35:0,79,560	0/0:10,0:9:17.80:0,18,131	0/0:10,0:10:14.74:0,15,108	0/1:17,2:20:3.56:4,0,285	0/0:25,2:26:0.72:0,1,316	0/0:22,3:24:0.33:0,0,320	0/0:15,0:15:18.03:0,18,169	0/0:26,0:27:52.48:0,52,369	0/1:13,2:16:29.56:30,0,130
chr10	86630478	.	AAAGG	A	1130.33	PASS	AB=0.900;AC=10;AF=0.192;AN=52;BaseQRankSum=3.362;DP=625;FS=21.502;HRun=0;HaplotypeScore=109.9388;InbreedingCoeff=-0.2288;MQ=51.89;MQ0=17;MQRankSum=-1.430;QD=5.21;ReadPosRankSum=-3.507;VQSLOD=-0.1620;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:27:37.27:37,0,283	0/0:7,0:7:18.06:0,18,336	./.	./.	0/0:30,0:30:84.20:0,84,1517	0/0:23,0:23:69.07:0,69,999	0/0:24,0:21:59.12:0,59,702	0/1:38,0:28:94.14:94,0,157	0/0:27,0:27:61.18:0,61,1231	0/0:39,0:39:99:0,108,1895	0/0:25,0:25:66.09:0,66,1013	0/0:22,0:22:63.11:0,63,915	0/0:23,0:23:66.17:0,66,1173	0/0:21,0:21:60.15:0,60,1058	0/0:32,0:29:87.12:0,87,1309	0/0:31,0:31:90.18:0,90,1565	0/0:35,0:35:99:0,105,1666	0/1:9,0:9:3.04:3,0,84	0/1:17,1:9:65.03:65,0,234	0/1:27,0:24:99:384,0,264	0/1:10,5:14:99:116,0,221	0/0:16,0:16:47.76:0,48,747	0/0:23,0:22:66.09:0,66,1131	0/0:28,0:28:73.40:0,73,1298	0/1:19,0:18:40.17:40,0,687	0/1:17,10:26:99:302,0,544	0/1:17,9:21:99:124,0,320	0/1:8,2:9:99:103,0,198
chr10	86630482	.	G	GAAGA	2688.59	PASS	AB=1.000;AC=20;AF=0.385;AN=52;BaseQRankSum=7.498;DP=636;FS=21.744;HRun=0;HaplotypeScore=109.8051;InbreedingCoeff=0.4765;MQ=51.56;MQ0=20;MQRankSum=-1.524;QD=8.70;ReadPosRankSum=0.752;VQSLOD=0.9141;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:28:44.95:128,0,45	0/1:6,0:6:30.46:30,0,210	./.	./.	0/0:30,0:30:71.76:0,72,902	0/0:25,0:25:44.94:0,45,558	0/0:25,0:22:38.89:0,39,450	1/1:43,0:28:32.78:239,33,0	0/0:27,0:27:63:0,63,847	0/1:42,0:42:21.25:21,0,1073	0/1:24,0:24:63.35:63,0,469	0/0:22,0:22:30.05:0,30,391	0/0:23,0:23:53.99:0,54,666	0/0:22,0:22:47.99:0,48,644	0/0:33,0:30:65.92:0,66,805	0/0:30,0:30:69.15:0,69,959	0/1:35,0:35:99:136,0,571	1/1:8,0:8:1.77:4,2,0	1/1:17,0:9:17.99:214,18,0	1/1:7,20:24:39.04:617,39,0	0/1:14,0:13:31.84:162,0,32	0/0:18,0:18:39.12:0,39,598	0/0:23,0:22:48.11:0,48,674	0/0:24,0:24:45.07:0,45,821	0/0:22,0:21:48.09:0,48,627	1/1:28,0:27:48.05:747,48,0	1/1:25,0:20:20.97:288,21,0	1/1:11,0:10:20.95:227,21,0
chr10	86630524	.	A	AGGAA	992.10	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=10.766;DP=677;FS=9.863;HRun=0;HaplotypeScore=107.5896;InbreedingCoeff=0.1583;MQ=53.65;MQ0=13;MQRankSum=-0.549;QD=5.42;ReadPosRankSum=-3.045;VQSLOD=0.7483;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,17:39:17.94:215,18,0	0/0:11,0:11:6.45:0,6,297	0/0:29,0:14:12:0,12,116	0/0:15,0:11:20.41:0,20,158	0/0:35,0:35:80.88:0,81,886	0/0:22,0:22:56.95:0,57,688	0/0:22,0:21:44.78:0,45,514	0/0:45,0:38:44.90:0,45,386	0/0:28,0:28:65.92:0,66,832	0/0:35,0:34:92.47:0,92,1186	0/1:20,0:20:14.43:14,0,452	0/0:18,0:18:35.98:0,36,460	0/0:26,0:25:53.93:0,54,664	0/0:24,0:24:46.95:0,47,628	0/0:28,0:28:63:0,63,824	0/0:28,0:28:68.88:0,69,831	0/0:35,0:35:36.91:0,37,623	1/1:4,0:4:5.90:38,6,0	0/1:13,0:11:36.74:37,0,101	0/1:27,0:24:99:307,0,124	0/1:13,0:13:66.42:66,0,104	0/0:18,0:18:45.12:0,45,671	0/0:21,0:21:48.06:0,48,601	0/0:32,0:32:65.95:0,66,772	0/0:21,0:21:54.01:0,54,722	0/1:30,0:29:99:285,0,198	0/1:25,0:20:99:134,0,106	0/1:11,0:10:48.91:49,0,104
chr10	86631397	.	T	TA	1710.97	PASS	AB=0.923;AC=9;AF=0.161;AN=56;BaseQRankSum=-1.248;DP=516;FS=2.424;HRun=8;HaplotypeScore=181.7064;InbreedingCoeff=0.8396;MQ=63.49;MQ0=0;MQRankSum=-4.735;QD=21.39;ReadPosRankSum=0.776;VQSLOD=1.6755;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:41.92:0,42,365	1/1:0,8:8:24.07:269,24,0	0/1:11,1:12:19.44:19,0,80	0/0:8,0:8:5.89:0,6,43	0/0:33,0:33:65.91:0,66,581	0/0:26,0:26:51.02:0,51,464	0/0:11,0:11:23.93:0,24,208	0/0:18,0:18:48.02:0,48,439	0/0:16,0:16:42.02:0,42,382	1/1:4,22:26:66.20:760,66,0	1/1:7,17:24:51.15:585,51,0	0/0:29,0:29:71.85:0,72,651	0/0:18,0:18:50.99:0,51,457	0/0:15,0:15:27.01:0,27,247	0/0:25,0:24:60.02:0,60,545	0/0:19,0:19:50.99:0,51,457	1/1:1,9:10:21.06:242,21,0	0/0:9,0:9:24.01:0,24,220	0/0:16,0:16:27.56:0,28,301	0/0:32,0:32:80.98:0,81,730	0/0:8,0:7:20.97:0,21,184	0/0:20,0:20:54.02:0,54,490	0/0:23,0:23:57.02:0,57,520	0/0:14,0:14:29.85:0,30,273	0/0:10,0:10:21.01:0,21,192	0/0:24,1:25:31.46:0,31,541	0/0:28,0:28:75.02:0,75,684	0/0:15,0:15:38.45:0,38,329
chr10	86631438	.	C	CT	506.76	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-1.369;DP=544;FS=0.000;HRun=10;HaplotypeScore=107.4687;InbreedingCoeff=0.7766;MQ=59.14;MQ0=2;MQRankSum=-0.872;QD=11.26;ReadPosRankSum=-0.147;VQSLOD=2.9323;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:22:54.10:563,54,0	0/0:8,0:8:17.95:0,18,148	0/1:13,0:10:4.89:5,0,103	0/0:10,0:5:8.98:0,9,72	0/0:18,1:19:12.96:0,13,313	0/0:22,0:22:44.93:0,45,369	0/0:14,0:14:23.91:0,24,193	0/0:40,0:40:80.21:0,80,664	0/0:16,0:15:29.92:0,30,246	0/0:24,0:24:52.95:0,53,423	0/0:25,0:24:50.87:0,51,416	0/0:26,0:26:44.14:0,44,426	0/0:13,0:13:35.96:0,36,296	0/0:18,0:18:38.90:0,39,317	0/0:23,0:22:47.89:0,48,391	0/0:14,0:14:35.95:0,36,295	0/0:23,0:23:56.43:0,56,479	1/1:4,0:10:12.25:59,12,0	0/0:21,0:24:57.01:0,57,431	0/0:29,0:29:65.87:0,66,540	0/0:18,0:18:37.47:0,37,296	0/0:15,0:15:41.79:0,42,334	0/0:23,0:23:53.88:0,54,436	0/0:17,0:17:38.88:0,39,313	0/0:10,0:10:26.88:0,27,212	0/0:27,0:27:68.89:0,69,566	0/0:25,0:25:62.90:0,63,516	0/0:15,0:15:41.90:0,42,336
chr10	86632144	.	C	CA	314.85	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.064;DP=557;FS=9.556;HRun=5;HaplotypeScore=64.1633;InbreedingCoeff=0.9720;MQ=66.80;MQ0=0;MQRankSum=-3.577;QD=26.24;ReadPosRankSum=1.283;VQSLOD=2.9093;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.17:0,78,828	0/0:6,0:6:15.04:0,15,161	0/0:17,0:13:23.94:0,24,229	0/0:13,0:11:18.01:0,18,182	0/0:35,0:35:99:0,105,1103	0/0:21,0:21:57.13:0,57,604	0/0:16,0:16:40.91:0,41,423	0/0:44,0:44:99:0,114,1225	0/0:18,0:18:45.10:0,45,474	0/0:22,0:22:59.67:0,60,644	0/0:25,0:25:60.15:0,60,644	0/0:21,0:21:54.13:0,54,580	0/0:16,0:16:42.10:0,42,450	0/0:17,0:17:48.12:0,48,515	0/0:20,0:20:54.11:0,54,564	0/0:14,0:14:36.09:0,36,387	0/0:19,0:19:48.06:0,48,492	1/1:2,10:12:33.06:409,33,0	0/0:19,0:19:42.10:0,42,451	0/0:22,0:22:66.17:0,66,708	0/0:11,0:11:24.06:0,24,258	0/0:21,0:21:60.15:0,60,645	0/0:22,0:22:57.14:0,57,611	0/0:11,0:11:33.08:0,33,355	0/0:26,0:26:78.17:0,78,822	0/0:22,0:22:60.15:0,60,644	0/0:26,0:26:72.17:0,72,764	0/0:14,0:14:42.11:0,42,451
chr10	86633224	.	AT	A	736.06	PASS	AB=1.000;AC=7;AF=0.140;AN=50;BaseQRankSum=2.300;DP=382;FS=0.000;HRun=11;HaplotypeScore=57.2184;InbreedingCoeff=0.7346;MQ=68.16;MQ0=7;MQRankSum=0.235;QD=12.48;ReadPosRankSum=1.545;VQSLOD=3.2669;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,1:16:12.43:0,12,324	./.	0/0:38,0:15:25.96:0,26,203	0/0:24,1:5:8.81:0,9,77	0/0:23,0:23:48.71:0,49,475	0/0:13,0:13:11.71:0,12,318	0/0:7,0:7:17.98:0,18,172	0/0:37,2:39:31.37:0,31,749	0/0:7,0:7:11.98:0,12,108	1/1:5,10:15:29.94:244,30,0	1/1:0,13:13:38.87:308,39,0	0/0:9,0:8:14.87:0,15,160	0/0:3,0:3:6.02:0,6,64	0/0:7,0:8:17.88:0,18,174	0/0:7,0:9:18:0,18,174	0/0:9,0:9:18.03:0,18,185	1/1:7,11:17:38.95:320,39,0	./.	0/0:18,0:18:42.08:0,42,432	0/1:13,0:13:3.35:3,0,146	0/0:3,0:3:3.01:0,3,32	./.	0/0:13,0:12:23.88:0,24,231	0/0:4,0:4:8.98:0,9,79	0/0:21,1:23:22.85:0,23,400	0/0:15,0:15:33.08:0,33,346	0/0:19,0:19:42.01:0,42,415	0/0:17,0:17:24.06:0,24,256
chr10	86635007	.	AC	A	2838.98	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=4.519;DP=449;FS=4.796;HRun=10;HaplotypeScore=48.5673;InbreedingCoeff=0.8748;MQ=65.88;MQ0=22;MQRankSum=1.217;QD=13.58;ReadPosRankSum=1.591;VQSLOD=3.3808;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,21:26:38.99:338,39,0	1/1:0,2:2:3:26,3,0	0/0:40,0:11:7.91:0,8,120	0/0:32,0:9:12.17:0,12,94	0/0:18,0:18:26.84:0,27,265	0/0:11,0:12:23.88:0,24,238	0/0:14,1:14:9.62:0,10,286	1/1:8,21:29:57.14:465,57,0	0/0:10,0:10:27.03:0,27,272	1/1:1,8:9:20.81:173,21,0	1/1:1,15:17:43.96:357,44,0	0/0:13,0:13:24.06:0,24,264	0/0:13,0:13:38.87:0,39,372	0/0:16,0:16:39.09:0,39,423	0/0:12,0:12:27.01:0,27,274	0/0:12,0:12:27.31:0,27,282	1/1:3,18:21:32.97:286,33,0	0/1:16,0:16:12.75:13,0,13	1/1:6,17:23:47.25:362,47,0	1/1:1,8:9:20.96:176,21,0	1/1:4,10:15:9.46:211,9,0	0/0:8,0:8:21.01:0,21,204	0/0:16,0:16:28.96:0,29,282	0/0:7,0:7:18.03:0,18,189	0/0:15,0:15:36.08:0,36,389	1/1:4,11:14:32.82:269,33,0	1/1:4,13:17:27.05:253,27,0	1/1:1,7:8:15:130,15,0
chr10	86635688	.	AG	A	1245.07	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=6.491;DP=390;FS=10.379;HRun=9;HaplotypeScore=44.1149;InbreedingCoeff=0.8536;MQ=79.37;MQ0=2;MQRankSum=-0.238;QD=17.29;ReadPosRankSum=1.061;VQSLOD=2.6892;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:90.25:0,90,1030	1/1:1,8:9:18.01:165,18,0	0/0:22,0:18:17.76:0,18,293	0/0:13,0:10:14.26:0,14,195	0/0:19,0:19:51.10:0,51,550	0/0:13,0:13:33.09:0,33,373	0/0:11,0:11:33.10:0,33,382	0/0:24,0:29:69.05:0,69,721	0/0:10,0:10:24.06:0,24,267	1/1:1,11:12:33:297,33,0	1/1:0,14:14:41.87:364,42,0	0/0:14,0:14:36.08:0,36,393	0/0:12,0:12:5.70:0,6,320	0/0:13,0:13:36.09:0,36,405	0/0:19,0:19:51.14:0,51,582	0/0:8,0:8:18.05:0,18,208	1/1:3,23:26:63.03:576,63,0	0/0:0,0:6:11.50:0,12,58	0/0:18,0:18:45.10:0,45,493	0/0:10,0:10:27.03:0,27,280	0/0:19,0:20:48.08:0,48,539	0/0:6,0:6:18.05:0,18,208	0/0:9,0:9:27.05:0,27,293	0/0:9,0:9:27.07:0,27,303	0/0:7,0:7:18.05:0,18,206	0/1:11,0:11:3.39:3,0,202	0/0:7,0:7:21.06:0,21,242	0/0:6,0:6:18.05:0,18,207
chr10	86635826	.	GTTAT	G	1304.68	PASS	AC=20;AF=0.417;AN=48;BaseQRankSum=2.337;DP=262;FS=3.010;HRun=0;HaplotypeScore=43.5443;InbreedingCoeff=0.6511;MQ=68.09;MQ0=2;MQRankSum=-0.204;QD=9.74;ReadPosRankSum=0.081;VQSLOD=2.1332;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,5:15:15.94:236,16,0	0/0:5,0:5:3.01:0,3,52	./.	./.	0/0:8,0:8:6.02:0,6,142	0/0:15,0:16:8.17:0,8,662	0/0:3,0:3:3:0,3,27	1/1:30,0:29:11.99:103,12,0	./.	0/0:9,0:9:12.04:0,12,195	0/0:10,0:10:6.02:0,6,106	0/0:4,0:4:6.01:0,6,96	./.	0/0:10,0:10:6.02:0,6,142	1/1:5,3:8:9.03:140,9,0	0/0:8,0:8:3.01:0,3,71	0/0:12,0:12:21.07:0,21,371	1/1:12,0:12:6:58,6,0	1/1:15,4:18:12.03:166,12,0	1/1:7,1:8:3.01:47,3,0	1/1:7,1:8:3.01:47,3,0	0/0:2,0:2:3.01:0,3,71	0/0:8,0:8:6.02:0,6,140	0/0:4,0:4:3.01:0,3,71	0/0:8,0:8:21.07:0,21,453	1/1:7,7:14:21.05:302,21,0	1/1:3,7:10:15.05:234,15,0	1/1:4,6:10:9.03:140,9,0
chr10	86636437	.	A	AAGAAATAAATGTATAT	2312.05	PASS	AB=0.686;AC=26;AF=0.929;AN=28;BaseQRankSum=-2.370;DP=35;FS=3.142;HRun=0;HaplotypeScore=26.3595;InbreedingCoeff=-0.1965;MQ=129.60;MQ0=0;MQRankSum=-2.037;QD=68.00;ReadPosRankSum=-0.624;VQSLOD=2.8664;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:1,0:4:8.77:425,0,9	0/1:3,1:4:14.45:320,0,14	1/1:1,0:1:3.01:71,3,0	./.	1/1:1,0:1:3.01:71,3,0	1/1:3,0:3:9.02:165,9,0	1/1:2,0:2:5.99:71,6,0	./.	./.	1/1:2,0:2:6.02:100,6,0	1/1:3,0:3:9.03:331,9,0	./.	1/1:5,0:5:12.01:278,12,0	./.	1/1:2,0:2:6.02:120,6,0	./.	./.	1/1:2,0:2:6.02:250,6,0	1/1:2,0:2:3.01:42,3,0	./.	./.	1/1:2,0:2:3.01:83,3,0	./.	1/1:1,0:1:3.01:73,3,0	./.	./.
chr10	86637201	.	GA	G	917.13	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=4.877;DP=596;FS=22.118;HRun=8;HaplotypeScore=77.1863;InbreedingCoeff=0.3074;MQ=67.35;MQ0=11;MQRankSum=-0.232;QD=4.54;ReadPosRankSum=1.337;VQSLOD=0.0114;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:26:57.09:549,57,0	0/1:14,0:14:17.61:18,0,37	0/1:53,0:18:10.88:11,0,72	0/0:35,0:17:21.29:0,21,146	0/0:31,0:31:78.15:0,78,898	0/0:25,0:25:75.20:0,75,872	0/0:14,0:14:38.99:0,39,408	0/0:31,0:31:29.39:0,29,217	0/0:20,0:20:60.13:0,60,678	0/1:18,0:18:7.49:89,0,7	0/1:25,0:25:41.86:42,0,68	0/0:21,0:21:60.11:0,60,694	0/0:19,0:19:54.15:0,54,640	0/0:20,0:20:56.96:0,57,662	0/0:17,0:17:51.10:0,51,559	0/0:16,0:16:48.09:0,48,531	0/1:17,0:17:33.24:33,0,75	1/1:4,15:19:33.04:318,33,0	0/0:28,0:28:19.07:0,19,102	0/0:23,0:23:6.21:0,6,106	1/1:12,0:12:2.43:6,2,0	0/0:12,0:12:36.02:0,36,381	0/0:17,0:18:42.97:0,43,483	0/0:12,0:12:36.10:0,36,424	0/0:14,0:14:36.11:0,36,434	0/0:13,0:13:10.80:0,11,98	0/1:17,0:17:6.97:7,0,18	0/0:24,0:24:3.30:0,3,44
chr10	86637209	.	AT	A	2444.06	PASS	AB=0.650;AC=17;AF=0.304;AN=56;BaseQRankSum=8.670;DP=592;FS=16.072;HRun=10;HaplotypeScore=74.1427;InbreedingCoeff=0.8597;MQ=70.99;MQ0=9;MQRankSum=0.254;QD=13.14;ReadPosRankSum=1.925;VQSLOD=1.9472;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:3.97:37,4,0	0/0:12,0:12:33.09:0,33,359	0/0:51,0:18:5.37:0,5,46	0/0:33,0:18:5.30:0,5,72	0/0:29,0:29:81:0,81,830	0/0:24,0:24:66.18:0,66,730	0/0:16,0:16:36.03:0,36,368	1/1:8,24:32:66.76:558,67,0	0/0:21,0:21:51.10:0,51,538	0/0:19,0:19:41.48:0,41,395	0/0:27,0:27:64.88:0,65,658	0/0:22,0:22:60.13:0,60,641	0/0:20,0:20:57.12:0,57,612	0/0:22,0:22:63.03:0,63,646	0/0:16,0:16:36.10:0,36,398	0/0:17,0:17:45.09:0,45,474	0/0:18,0:18:45.02:0,45,457	1/1:16,0:16:14.08:37,14,0	1/1:3,24:27:38.80:562,39,0	1/1:5,15:20:20.55:331,21,0	1/1:0,11:11:24:208,24,0	0/0:15,0:15:39.01:0,39,395	0/0:17,0:17:45.02:0,45,456	0/0:13,0:13:33.05:0,33,350	0/0:12,0:12:36.08:0,36,384	0/1:6,7:13:8.74:158,0,9	1/1:1,16:17:41.99:364,42,0	1/1:2,22:24:44.97:390,45,0
chr10	86640176	.	TA	T	387.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.913;DP=469;FS=5.683;HRun=1;HaplotypeScore=42.8999;InbreedingCoeff=0.8525;MQ=67.09;MQ0=0;MQRankSum=-1.473;QD=24.22;ReadPosRankSum=1.203;VQSLOD=3.4324;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.05:0,42,537	0/0:7,0:7:21.07:0,21,285	0/0:9,0:9:15.54:0,16,243	0/0:7,0:7:15.05:0,15,199	0/0:25,0:25:72.05:0,72,842	0/0:17,0:17:51.14:0,51,677	0/0:9,0:9:27.07:0,27,352	0/0:27,0:27:81.19:0,81,983	0/0:14,0:14:42.14:0,42,567	0/0:19,0:19:57.17:0,57,758	0/0:31,0:31:93.21:0,93,1210	0/0:22,0:22:66.21:0,66,890	0/0:14,0:14:42.14:0,42,585	0/0:11,0:11:33.08:0,33,420	0/0:16,0:16:48.13:0,48,621	0/0:15,0:15:45.15:0,45,622	0/0:22,0:22:63.18:0,63,854	1/1:1,15:16:13.63:475,14,0	0/0:22,0:22:63.13:0,63,756	0/0:36,0:36:99:0,108,1431	0/0:14,0:14:42.14:0,42,586	0/0:8,0:8:24.08:0,24,333	0/0:13,0:13:39.13:0,39,531	0/0:9,0:9:27.06:0,27,336	0/0:18,0:18:54.15:0,54,695	0/0:25,0:25:75.24:0,75,1021	0/0:25,0:25:75.19:0,75,999	0/0:2,0:2:6:0,6,65
chr10	86640705	.	GT	G	389.49	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=6.342;DP=476;FS=6.223;HRun=9;HaplotypeScore=55.6040;InbreedingCoeff=0.7264;MQ=74.48;MQ0=2;MQRankSum=0.239;QD=14.43;ReadPosRankSum=0.521;VQSLOD=3.3642;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,16:20:54:484,54,0	0/0:8,0:8:21.03:0,21,221	0/0:21,0:17:34.73:0,35,347	0/0:10,0:9:14.05:0,14,129	0/0:29,0:29:75.21:0,75,855	0/0:24,0:24:63.17:0,63,710	0/0:14,0:14:36.11:0,36,415	0/0:33,0:33:72.63:0,73,802	0/0:15,0:15:42.06:0,42,468	0/0:32,0:33:93.10:0,93,1046	0/0:22,0:22:60.14:0,60,678	0/0:7,0:8:23.90:0,24,257	0/1:7,0:7:2.33:2,0,177	0/0:13,0:13:36.11:0,36,415	0/0:14,0:14:42.12:0,42,485	0/0:10,0:10:27.08:0,27,312	0/0:26,0:26:69.19:0,69,786	0/0:1,0:15:42.71:0,43,218	0/0:18,0:18:45.10:0,45,499	0/0:22,0:22:66.17:0,66,743	0/0:18,0:18:42.12:0,42,485	0/0:7,0:7:18.05:0,18,208	0/0:21,0:21:60.18:0,60,692	0/0:13,0:15:44.80:0,45,479	0/0:9,0:9:24.05:0,24,261	0/0:12,0:12:33.10:0,33,381	0/0:21,0:21:57.14:0,57,628	0/0:11,0:11:33.08:0,33,371
chr10	86640777	.	T	TA	880.57	PASS	AB=1.000;AC=5;AF=0.093;AN=54;BaseQRankSum=3.423;DP=517;FS=28.112;HRun=9;HaplotypeScore=50.7715;InbreedingCoeff=0.7851;MQ=72.71;MQ0=0;MQRankSum=0.203;QD=14.68;ReadPosRankSum=1.311;VQSLOD=1.7996;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:26:69.13:734,69,0	0/0:11,0:11:32.98:0,33,283	0/1:15,0:14:14.58:15,0,114	./.	0/0:19,0:19:41.97:0,42,361	0/0:18,0:18:38.99:0,39,339	0/0:14,0:14:41.96:0,42,356	0/0:17,0:18:34.99:0,35,290	0/0:13,0:13:32.99:0,33,286	0/0:30,0:30:74.97:0,75,649	0/0:26,0:26:68.98:0,69,599	0/0:12,0:12:35.99:0,36,313	0/0:11,0:11:32.97:0,33,280	0/0:22,0:22:47.97:0,48,417	0/0:21,0:21:53.92:0,54,459	0/0:17,0:17:47.97:0,48,413	0/0:32,0:32:86.98:0,87,755	1/1:0,1:19:48.46:260,48,0	0/0:23,0:23:56.98:0,57,495	0/0:26,0:26:62.95:0,63,543	0/0:21,0:21:59.99:0,60,521	0/0:11,0:11:29.98:0,30,257	0/0:18,0:18:41.96:0,42,361	0/0:19,0:19:56.99:0,57,495	0/0:15,0:15:44.98:0,45,388	0/0:22,0:22:59.99:0,60,521	0/0:16,0:16:41.99:0,42,365	0/0:19,0:19:44.99:0,45,391
chr10	86640973	.	TAACAAAACAA	T	3063.11	PASS	AB=0.586;AC=9;AF=0.161;AN=56;BaseQRankSum=9.385;DP=606;FS=7.622;HRun=0;HaplotypeScore=173.7866;InbreedingCoeff=0.8542;MQ=72.33;MQ0=7;MQRankSum=-8.075;QD=32.59;ReadPosRankSum=0.185;VQSLOD=2.7773;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,24:34:25.11:756,0,25	1/1:0,4:4:12.04:362,12,0	0/0:25,0:19:35.61:0,36,1151	0/0:43,0:31:46.17:0,46,1259	0/0:21,0:21:54.19:0,54,2401	0/0:25,0:25:69.24:0,69,3307	0/0:19,0:19:42.14:0,42,1982	0/0:30,0:30:57.19:0,57,2068	0/0:17,0:17:48.16:0,48,2430	1/1:4,13:17:33.11:959,33,0	1/1:4,10:14:24.08:688,24,0	0/0:17,0:17:42.14:0,42,1892	0/0:18,0:18:48.16:0,48,2161	0/0:16,0:16:39.13:0,39,1704	0/0:24,0:24:60.21:0,60,2949	0/0:27,0:27:72.23:0,72,3083	1/1:17,8:25:15.05:459,15,0	0/0:18,0:18:42.13:0,42,1839	0/0:20,0:20:51.18:0,51,2051	0/0:23,0:23:60.20:0,60,2762	0/0:29,0:29:63.22:0,63,3058	0/0:12,0:12:30.10:0,30,1314	0/0:22,0:22:54.19:0,54,2495	0/0:33,0:33:78.27:0,78,3553	0/0:14,0:14:33.11:0,33,1589	0/0:22,0:22:56.78:0,57,2559	0/0:23,0:23:60.18:0,60,2669	0/0:14,0:14:42.14:0,42,1966
chr10	86645361	.	GATTT	G	883.80	PASS	AC=18;AF=0.500;AN=36;BaseQRankSum=4.100;DP=239;FS=6.527;HRun=0;HaplotypeScore=41.3970;InbreedingCoeff=0.5670;MQ=71.10;MQ0=8;MQRankSum=0.974;QD=7.07;ReadPosRankSum=0.948;VQSLOD=0.0473;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:9:3:28,3,0	./.	./.	./.	0/0:5,0:5:3.01:0,3,70	0/0:6,0:6:15.05:0,15,351	0/0:6,0:6:3.01:0,3,70	0/0:36,0:32:12.01:0,12,165	./.	1/1:3,3:6:9.03:138,9,0	1/1:8,3:11:8.99:113,9,0	0/0:8,0:8:6.02:0,6,140	0/0:4,0:4:3.01:0,3,70	./.	0/0:5,0:5:3.01:0,3,58	./.	1/1:19,12:31:21.07:325,21,0	1/1:13,0:12:12.01:112,12,0	1/1:15,0:11:6.01:73,6,0	./.	1/1:4,1:5:3.01:46,3,0	./.	./.	0/0:4,0:4:3.01:0,3,70	0/0:5,0:5:3.01:0,3,70	./.	1/1:6,3:9:3.01:46,3,0	1/1:22,3:25:9.03:139,9,0
chr10	86645402	.	ATTTATTTT	A	290.84	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=1.737;DP=199;FS=1.725;HRun=0;HaplotypeScore=46.5493;InbreedingCoeff=0.3379;MQ=61.08;MQ0=5;MQRankSum=-3.708;QD=12.12;ReadPosRankSum=2.375;VQSLOD=1.5979;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:8:14.29:14,0,128	0/0:1,0:1:3:0,3,27	0/0:8,0:5:14.63:0,15,141	0/0:11,0:9:22.36:0,22,199	0/0:6,0:6:18.02:0,18,274	0/0:14,0:13:39.04:0,39,881	0/0:4,0:4:12.02:0,12,220	0/0:26,0:22:66.08:0,66,919	0/0:3,0:3:9:0,9,80	0/0:7,0:7:21.04:0,21,235	0/0:6,0:6:17.94:0,18,178	0/0:6,0:6:18.03:0,18,372	0/0:2,0:2:6.01:0,6,166	0/0:4,0:4:12.01:0,12,112	0/0:4,0:4:12.01:0,12,212	0/0:3,0:3:9.01:0,9,84	0/0:21,0:21:44.92:0,45,466	1/1:1,14:14:15:375,15,0	0/0:10,0:10:28.55:0,29,290	0/0:4,0:4:12:0,12,107	0/0:3,0:3:9.01:0,9,92	0/0:1,0:1:3.01:0,3,122	0/0:3,0:3:9.01:0,9,83	0/0:4,0:4:12.01:0,12,218	0/0:2,0:2:6.01:0,6,167	0/0:5,0:5:15.02:0,15,141	0/0:7,0:7:15.03:0,15,168	0/0:10,0:9:27.07:0,27,361
chr10	86645955	.	G	GT	674.95	PASS	AB=0.941;AC=3;AF=0.054;AN=56;BaseQRankSum=-5.518;DP=607;FS=0.740;HRun=8;HaplotypeScore=63.0560;InbreedingCoeff=0.6412;MQ=81.02;MQ0=0;MQRankSum=-3.116;QD=11.06;ReadPosRankSum=0.482;VQSLOD=2.1537;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:29:66.20:762,66,0	0/0:6,0:6:15:0,15,137	0/1:30,1:25:18.64:19,0,285	0/0:23,1:22:44.81:0,45,349	0/0:40,0:40:99:0,111,1008	0/0:20,0:20:57.03:0,57,521	0/0:12,0:12:26.87:0,27,226	0/0:35,0:35:98.78:0,99,867	0/0:19,0:19:51.03:0,51,467	0/0:22,0:22:30.72:0,31,467	0/0:21,0:21:54.02:0,54,494	0/0:16,0:16:45:0,45,407	0/0:17,0:17:36:0,36,329	0/0:21,1:22:22.38:0,22,450	0/0:20,0:20:60.03:0,60,549	0/0:17,0:16:48:0,48,434	0/0:31,0:31:80.62:0,81,729	0/0:18,0:18:47.99:0,48,431	0/0:19,0:19:41.95:0,42,372	0/0:18,0:18:54:0,54,484	0/0:21,0:21:51.01:0,51,463	0/0:20,0:20:60.03:0,60,548	0/0:27,0:27:81.04:0,81,741	0/0:12,0:12:30.02:0,30,274	0/0:18,0:18:44.98:0,45,403	0/0:23,0:23:54.01:0,54,491	0/0:35,0:35:99:0,102,913	0/0:13,0:13:36:0,36,324
chr10	86647257	.	T	TG	835.78	PASS	AB=0.732;AC=6;AF=0.107;AN=56;BaseQRankSum=5.809;DP=622;FS=0.681;HRun=10;HaplotypeScore=88.4497;InbreedingCoeff=0.6041;MQ=71.32;MQ0=0;MQRankSum=-1.009;QD=9.95;ReadPosRankSum=0.247;VQSLOD=2.7818;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:87.11:0,87,684	0/1:2,1:3:18.62:26,0,19	0/0:18,0:22:13.55:0,14,221	0/0:19,0:18:33.62:0,34,242	0/0:22,0:25:56.62:0,57,418	0/0:20,0:21:43.95:0,44,344	0/0:22,0:22:53.86:0,54,434	0/0:16,0:16:29.87:0,30,235	0/0:20,1:22:43.93:0,44,344	1/1:13,9:22:30.06:311,30,0	0/1:12,8:20:67.34:105,0,67	0/0:25,0:25:53.73:0,54,417	0/0:21,0:23:45.81:0,46,345	0/0:15,0:16:31.97:0,32,248	0/0:22,0:23:55.96:0,56,446	0/0:14,0:14:35.75:0,36,281	1/1:14,25:38:10.87:527,11,0	0/0:17,0:18:40.97:0,41,322	0/0:15,0:17:28.02:0,28,209	0/0:34,0:34:73.70:0,74,575	0/0:26,0:28:48.97:0,49,374	0/0:20,0:20:26.95:0,27,222	0/0:15,0:15:28.51:0,29,214	0/0:20,0:20:53.93:0,54,443	0/0:23,0:23:50.36:0,50,392	0/0:30,0:31:43.66:0,44,331	0/0:21,0:23:46.97:0,47,375	0/0:11,0:11:20.94:0,21,168
chr10	86649602	.	TTG	T	1089.16	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.015;DP=690;FS=16.716;HRun=0;HaplotypeScore=82.5850;InbreedingCoeff=0.9986;MQ=64.83;MQ0=0;MQRankSum=-2.854;QD=26.56;ReadPosRankSum=1.009;VQSLOD=3.5769;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,38:41:81.47:1184,81,0	0/0:10,0:10:29.88:0,30,385	0/0:18,0:17:40.49:0,40,609	0/0:15,0:13:29.83:0,30,316	0/0:16,0:16:45.15:0,45,736	0/0:14,0:14:42.12:0,42,649	0/0:24,0:24:72.18:0,72,1074	0/0:23,0:23:62.97:0,63,869	0/0:35,0:35:96.17:0,96,1393	0/0:32,0:32:89.69:0,90,1357	0/0:19,0:19:48.98:0,49,714	0/0:26,0:26:76.45:0,76,1121	0/0:18,0:18:51.11:0,51,766	0/0:20,0:20:60.20:0,60,984	0/0:31,0:31:93.09:0,93,1337	0/0:27,0:27:81.25:0,81,1289	0/0:31,0:31:90.02:0,90,1374	0/0:26,0:26:68.99:0,69,954	0/0:27,0:27:81.23:0,81,1202	0/0:29,0:29:80.24:0,80,1106	0/0:28,0:28:81.17:0,81,1196	0/0:24,0:24:72.02:0,72,1040	0/0:18,0:18:51.02:0,51,741	0/0:34,0:34:99:0,102,1641	0/0:19,0:19:57.18:0,57,920	0/0:34,0:34:99:0,102,1547	0/0:36,0:36:99:0,108,1623	0/0:15,0:15:32.90:0,33,511
chr10	86649946	.	GCA	G	514.48	PASS	AB=0.867;AC=16;AF=0.296;AN=54;BaseQRankSum=6.975;DP=537;FS=3.602;HRun=0;HaplotypeScore=74.2646;InbreedingCoeff=-0.2984;MQ=65.35;MQ0=6;MQRankSum=2.418;QD=1.60;ReadPosRankSum=-0.803;VQSLOD=1.2346;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,5:34:36.56:37,0,709	0/0:1,0:10:18.65:0,19,177	0/0:22,0:8:3.01:0,3,46	./.	0/0:20,0:21:14.21:0,14,601	0/1:24,5:29:90.55:91,0,436	0/1:14,2:16:45.83:46,0,374	0/1:29,1:31:20.12:20,0,441	0/0:20,0:20:45.14:0,45,663	0/0:10,0:15:17.99:0,18,165	0/0:10,0:17:7.48:0,7,78	0/0:13,0:12:27.07:0,27,389	0/1:13,2:15:34.72:35,0,378	0/1:8,6:14:80.73:81,0,136	0/1:13,2:16:37.73:38,0,318	0/1:12,1:13:12.87:13,0,233	0/0:14,0:24:27:0,27,271	1/1:6,0:15:6.17:98,6,0	0/0:11,0:11:12:0,12,157	0/0:15,0:15:21.06:0,21,298	0/1:25,5:30:50.56:51,0,559	0/1:21,2:23:22.69:23,0,551	0/1:13,1:15:14.98:15,0,358	0/1:18,4:24:70.78:71,0,441	0/1:16,3:19:28.71:29,0,465	0/0:24,1:25:14.22:0,14,623	0/1:22,2:25:25.72:26,0,484	0/0:4,0:4:9.03:0,9,138
chr10	86651273	.	CA	C	1076.23	PASS	AB=0.931;AC=17;AF=0.304;AN=56;BaseQRankSum=7.334;DP=566;FS=5.421;HRun=13;HaplotypeScore=72.7684;InbreedingCoeff=0.3169;MQ=51.89;MQ0=21;MQRankSum=3.629;QD=4.74;ReadPosRankSum=0.519;VQSLOD=1.9584;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:37:59.97:0,60,312	1/1:5,8:12:11.89:88,12,0	0/1:6,0:3:1.72:2,0,24	0/1:5,0:5:7.62:8,0,16	0/0:22,1:23:16.94:0,17,302	0/0:14,1:17:0.97:0,1,301	0/0:19,1:18:17.04:0,17,302	0/0:31,2:30:4.11:0,4,345	0/0:16,0:15:26.93:0,27,237	1/1:7,12:19:35.74:262,36,0	1/1:4,10:15:28.66:198,29,0	0/1:12,1:13:30.36:30,0,133	0/0:19,1:19:24:0,24,365	0/0:18,1:19:2.04:0,2,163	0/0:20,2:23:3.93:0,4,335	0/0:15,0:14:32.99:0,33,306	1/1:11,21:32:65.45:469,65,0	1/1:5,0:26:44.80:129,45,0	0/0:18,2:20:10.83:0,11,263	0/1:19,1:20:13.62:14,0,194	0/1:20,4:24:15.49:15,0,315	0/1:12,2:15:16.26:16,0,132	0/0:16,0:17:12.70:0,13,251	0/0:21,1:21:1.07:0,1,309	0/0:16,0:17:41.99:0,42,392	0/0:24,0:25:17.06:0,17,310	0/1:30,4:33:21.22:21,0,415	0/0:10,0:8:24.03:0,24,228
chr10	86652045	.	A	AAAAAAAG	1397.14	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-2.485;DP=551;FS=5.344;HRun=0;HaplotypeScore=135.0073;InbreedingCoeff=0.8012;MQ=56.29;MQ0=7;MQRankSum=-6.525;QD=46.57;ReadPosRankSum=-0.573;VQSLOD=3.2079;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,15:25:45.15:1492,45,0	0/0:12,0:12:23.99:0,24,449	0/0:5,0:3:6:0,6,87	0/1:3,0:3:0:0,0,0	0/0:36,0:36:75.19:0,75,1569	0/0:19,0:19:45.08:0,45,927	0/0:17,0:17:36.10:0,36,732	0/0:19,0:19:42.12:0,42,818	0/0:22,0:21:48.15:0,48,1013	0/0:26,0:26:51.17:0,51,1119	0/0:21,0:21:45.09:0,45,890	0/0:21,0:21:51.12:0,51,1068	0/0:14,0:14:30.10:0,30,682	0/0:12,0:12:18.05:0,18,352	0/0:12,0:12:36.11:0,36,775	0/0:13,0:13:30.06:0,30,599	0/0:46,0:43:99:0,108,2253	0/0:36,0:35:78.27:0,78,1750	0/0:17,0:16:27.06:0,27,486	0/0:24,0:24:50.99:0,51,1063	0/0:13,0:13:23.78:0,24,544	0/0:22,0:21:36.07:0,36,729	0/0:15,0:15:23.96:0,24,322	0/0:17,0:17:38.76:0,39,794	0/0:19,0:19:42.12:0,42,892	0/0:29,0:28:72.23:0,72,1516	0/0:29,0:29:63.18:0,63,1367	0/0:5,0:5:15.05:0,15,341
chr10	86653034	.	CTTAT	C	4317.84	PASS	AB=1.000;AC=23;AF=0.426;AN=54;BaseQRankSum=7.118;DP=376;FS=9.665;HRun=0;HaplotypeScore=64.4310;InbreedingCoeff=0.7784;MQ=67.64;MQ0=2;MQRankSum=2.087;QD=22.03;ReadPosRankSum=-2.704;VQSLOD=2.9333;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:33:54.16:0,54,907	1/1:5,0:5:6.02:82,6,0	0/0:9,0:7:3.01:0,3,57	./.	0/0:16,0:16:21.07:0,21,508	0/0:18,0:18:45.15:0,45,1051	0/0:6,0:6:6.02:0,6,93	1/1:18,12:30:36.12:571,36,0	0/0:12,0:12:18.06:0,18,435	1/1:6,10:16:33.09:487,33,0	1/1:5,9:14:24.08:365,24,0	0/0:6,0:6:9.03:0,9,218	0/0:4,0:4:3.01:0,3,73	0/0:7,0:7:18.05:0,18,358	0/0:14,0:14:33.11:0,33,778	0/0:8,0:8:12.04:0,12,269	1/1:8,21:29:51.17:826,51,0	0/1:14,0:14:1.09:1,0,7	1/1:12,8:19:24.08:386,24,0	1/1:6,6:12:15.05:243,15,0	1/1:3,3:6:6.02:97,6,0	0/0:6,0:6:3.01:0,3,73	0/0:8,0:8:12.04:0,12,290	0/0:3,0:3:3.01:0,3,73	0/0:23,0:23:48.13:0,48,1035	1/1:8,15:23:48.16:772,48,0	1/1:9,10:18:24.08:389,24,0	1/1:4,4:8:6.02:97,6,0
chr10	86654057	.	C	CT	518.78	PASS	AB=0.863;AC=8;AF=0.143;AN=56;BaseQRankSum=-1.779;DP=566;FS=11.735;HRun=13;HaplotypeScore=65.9812;InbreedingCoeff=-0.1822;MQ=66.24;MQ0=0;MQRankSum=1.230;QD=3.28;ReadPosRankSum=0.400;VQSLOD=-0.6688;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,30:46:18.30:479,0,18	0/1:7,0:8:5.34:5,0,90	0/0:10,1:10:0.68:0,1,32	0/0:12,0:13:13.72:0,14,82	0/1:16,4:22:59.79:60,0,203	0/1:13,3:17:43.74:44,0,157	0/0:22,0:24:45.58:0,46,299	0/0:31,0:33:45.57:0,46,430	0/0:21,3:26:4.89:0,5,303	0/0:16,0:16:5.50:0,6,178	0/0:15,1:18:2.89:0,3,148	0/0:12,0:14:24.82:0,25,154	0/0:18,0:18:34.13:0,34,230	0/0:13,0:14:10.84:0,11,179	0/0:13,0:14:34.72:0,35,230	0/1:9,1:12:4.98:5,0,106	0/0:33,0:36:49.31:0,49,456	0/0:27,0:28:64.38:0,64,433	0/0:19,1:23:21.87:0,22,261	0/1:14,1:17:1.78:2,0,194	0/0:21,0:23:42.64:0,43,278	0/0:13,0:14:22.75:0,23,147	0/0:14,1:15:4.84:0,5,175	0/0:22,1:24:27.16:0,27,314	0/0:14,0:16:21.57:0,22,184	0/1:17,2:22:25.89:26,0,111	0/0:21,4:26:25.96:0,26,309	0/1:11,3:14:19.97:20,0,170
chr10	86654894	.	T	TATCCATCC	4830.31	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-1.218;DP=766;FS=3.150;HRun=0;HaplotypeScore=197.0864;InbreedingCoeff=0.9523;MQ=58.62;MQ0=4;MQRankSum=-7.933;QD=34.75;ReadPosRankSum=-4.662;VQSLOD=3.4970;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:44.33:686,44,0	1/1:3,9:14:15.05:621,15,0	0/0:35,0:23:36.09:0,36,580	0/0:39,0:25:13.16:0,13,403	0/0:41,0:41:99:0,99,2278	0/0:28,0:28:69.24:0,69,1649	0/0:27,0:27:13.21:0,13,1053	0/0:37,0:37:51.16:0,51,1067	0/0:35,0:35:75.23:0,75,1769	1/1:9,18:34:51.15:1662,51,0	1/1:12,17:33:39.13:1488,39,0	0/0:26,0:26:60.09:0,60,1354	0/0:24,0:24:39.13:0,39,941	0/0:26,0:26:66.20:0,66,1525	0/0:17,0:17:42.14:0,42,1043	0/0:24,0:24:60.21:0,60,1496	1/1:11,10:23:9.03:372,9,0	0/0:26,0:26:8.24:0,8,114	0/0:25,0:23:48.15:0,48,1043	0/0:28,0:28:57.20:0,57,1408	0/0:39,0:39:75.23:0,75,1670	0/0:33,0:33:66.19:0,66,1437	0/0:21,0:21:48.15:0,48,1158	0/0:16,0:16:33.11:0,33,813	0/0:20,0:20:42.14:0,42,994	0/0:31,0:31:60.19:0,60,1455	0/0:22,0:22:39.13:0,39,968	0/0:7,0:7:15.05:0,15,327
chr10	86654906	.	C	CATGT	1130.95	PASS	AB=0.910;AC=5;AF=0.089;AN=56;BaseQRankSum=6.151;DP=774;FS=0.551;HRun=0;HaplotypeScore=144.5336;InbreedingCoeff=-0.0978;MQ=57.77;MQ0=10;MQRankSum=-6.444;QD=8.44;ReadPosRankSum=4.634;VQSLOD=2.5580;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:68.81:0,69,847	0/1:15,0:15:51.55:52,0,126	0/0:35,0:18:48.16:0,48,870	0/0:44,0:28:59.88:0,60,1040	0/0:40,0:40:99:0,114,2142	0/0:28,0:28:84.29:0,84,1590	0/0:23,0:23:62.90:0,63,1104	0/0:38,0:38:99:0,99,1804	0/0:34,0:34:99:0,99,1804	0/1:36,0:36:82.57:83,0,570	0/1:34,0:34:99:124,0,521	0/0:27,0:27:81.21:0,81,1485	0/0:21,0:21:63.20:0,63,1121	0/0:26,0:26:75.26:0,75,1424	0/0:22,0:22:66.21:0,66,1193	0/0:24,0:24:66.23:0,66,1265	0/1:26,0:26:19.48:19,0,320	0/1:4,19:23:99:971,0,129	0/0:25,0:22:63.18:0,63,1109	0/0:29,0:29:84.29:0,84,1551	0/0:40,0:40:99:0,117,2100	0/0:29,0:29:87.29:0,87,1605	0/0:22,0:22:66.21:0,66,1206	0/0:18,0:18:50.87:0,51,909	0/0:19,0:19:54.17:0,54,994	0/0:32,0:32:96.32:0,96,1769	0/0:16,0:16:45.15:0,45,850	0/0:10,0:10:30.10:0,30,528
chr10	86656252	.	CACAG	C	1803.32	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.867;DP=730;FS=7.765;HRun=0;HaplotypeScore=124.9702;InbreedingCoeff=0.9563;MQ=58.48;MQ0=8;MQRankSum=4.185;QD=29.09;ReadPosRankSum=2.858;VQSLOD=3.4167;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:55.77:0,56,909	1/1:2,3:5:6.02:98,6,0	0/0:21,0:13:15.04:0,15,318	0/0:21,0:12:24.54:0,25,453	0/0:21,0:21:45.14:0,45,1014	0/0:16,0:16:38.98:0,39,843	0/0:38,1:39:26.06:0,26,1431	0/0:42,0:40:60.15:0,60,1033	0/0:22,0:22:57.16:0,57,1262	1/1:6,16:22:44.94:629,45,0	1/1:2,6:8:15.05:246,15,0	0/0:16,0:16:42.14:0,42,1020	0/0:27,0:27:63.18:0,63,1411	0/0:16,0:16:42.14:0,42,1016	0/0:21,0:21:45.14:0,45,1025	0/0:19,0:19:48.12:0,48,1024	1/1:2,25:27:60.20:983,60,0	0/0:35,0:35:19.76:0,20,871	0/0:18,0:16:23.97:0,24,391	0/0:16,0:16:19.07:0,19,616	0/0:71,0:71:99:0,153,3054	0/0:24,0:24:60.18:0,60,1273	0/0:26,0:26:45.14:0,45,1032	0/0:44,0:44:99:0,111,2344	0/0:27,0:27:66.19:0,66,1465	0/0:34,0:34:81.27:0,81,1803	0/0:33,0:33:81.19:0,81,1626	0/0:15,0:15:30.07:0,30,633
chr10	86656276	.	G	GACACAC	1178.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.340;DP=715;FS=4.615;HRun=0;HaplotypeScore=154.8616;InbreedingCoeff=0.9561;MQ=59.79;MQ0=9;MQRankSum=-5.167;QD=25.61;ReadPosRankSum=-1.288;VQSLOD=3.0844;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,27:44:40.69:1273,41,0	0/0:5,0:5:12.04:0,12,208	0/0:29,0:20:54.16:0,54,991	0/0:34,0:25:45.36:0,45,791	0/0:18,0:18:45.15:0,45,974	0/0:18,0:18:48.16:0,48,1004	0/0:30,0:30:60.20:0,60,1265	0/0:29,0:27:51.17:0,51,1019	0/0:24,0:24:60.21:0,60,1244	0/0:22,0:22:45.07:0,45,744	0/0:12,0:12:21.07:0,21,368	0/0:14,0:14:42.14:0,42,898	0/0:25,0:25:66.23:0,66,1421	0/0:17,0:17:42.14:0,42,904	0/0:18,0:18:51.16:0,51,1060	0/0:21,0:21:54.12:0,54,1079	0/0:33,0:33:81.24:0,81,1326	0/0:29,0:29:38.65:0,39,820	0/0:20,0:19:17.11:0,17,648	0/0:14,0:14:27.09:0,27,562	0/0:58,0:58:96.76:0,97,2264	0/0:22,0:22:54.18:0,54,1118	0/0:17,0:17:42.14:0,42,909	0/0:47,0:47:99:0,114,2280	0/0:28,0:28:69.24:0,69,1476	0/0:33,0:33:90.30:0,90,1852	0/0:33,0:33:72.23:0,72,1503	0/0:17,0:17:45.15:0,45,937
chr10	86656434	.	GAA	G	4676.98	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=5.079;DP=587;FS=1.106;HRun=12;HaplotypeScore=83.6317;InbreedingCoeff=0.9910;MQ=73.64;MQ0=0;MQRankSum=-1.488;QD=21.45;ReadPosRankSum=-0.645;VQSLOD=4.3427;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:26:49.24:213,49,0	0/0:1,0:8:14.97:0,15,53	0/0:13,0:9:12.01:0,12,139	0/0:16,0:17:19.98:0,20,177	0/0:22,0:23:60.20:0,60,872	0/0:20,0:20:54.09:0,54,737	0/0:14,0:14:36.09:0,36,496	1/1:4,23:27:69.04:671,69,0	0/0:18,0:19:56.68:0,57,813	0/0:3,1:24:22.89:0,23,159	0/0:3,0:25:49.66:0,50,175	0/0:12,0:12:27.06:0,27,380	0/0:15,0:15:39.13:0,39,577	0/0:14,0:14:36.06:0,36,474	0/0:25,0:27:68.70:0,69,958	0/0:15,0:18:47.60:0,48,628	0/0:3,0:29:64.88:0,65,228	1/1:0,11:12:35.82:348,36,0	1/1:5,19:25:47.79:540,48,0	1/1:3,29:33:74.90:763,75,0	1/1:1,13:14:33.07:336,33,0	0/0:24,0:26:68.19:0,68,938	0/0:19,0:22:65.13:0,65,852	0/0:14,0:15:45.13:0,45,635	0/0:25,0:27:77.72:0,78,1066	1/1:6,27:35:77.64:827,78,0	1/1:6,24:31:65.87:653,66,0	1/1:0,14:15:26.80:327,27,0
chr10	86657110	.	T	TACAC	2326.67	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=6.819;DP=668;FS=11.063;HRun=0;HaplotypeScore=133.1953;InbreedingCoeff=0.8615;MQ=53.06;MQ0=36;MQRankSum=-3.497;QD=8.16;ReadPosRankSum=-3.356;VQSLOD=1.4508;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:51,0:49:21.68:303,22,0	0/0:4,0:4:2.80:0,3,13	0/0:57,0:11:2.74:0,3,12	0/0:74,0:11:11.85:0,12,89	0/0:14,0:14:8.96:0,9,127	0/0:15,0:16:13.49:0,13,418	0/0:37,0:38:69.09:0,69,945	1/1:33,0:31:33.07:308,33,0	0/0:18,0:18:6.72:0,7,192	1/1:19,0:18:16.39:229,16,0	1/1:10,0:10:4.81:30,5,0	0/0:19,0:19:32.71:0,33,404	0/0:10,0:10:20.82:0,21,267	0/0:20,0:19:30.09:0,30,421	0/0:19,0:20:32.12:0,32,433	0/0:17,0:17:30.08:0,30,440	1/1:27,0:27:19.25:140,19,0	1/1:14,4:18:34.81:520,35,0	1/1:17,0:14:10.27:65,10,0	1/1:16,0:16:4.90:52,5,0	1/1:42,0:40:27.41:320,27,0	0/0:16,0:16:14.96:0,15,209	0/0:11,0:11:18.03:0,18,234	0/0:35,0:35:77.60:0,78,1067	0/0:13,0:14:15.05:0,15,238	1/1:23,0:23:22.68:258,23,0	1/1:24,0:23:19.05:211,19,0	1/1:5,0:5:8.51:105,9,0
chr10	86657140	.	C	CACAT	2424.81	PASS	AB=0.981;AC=16;AF=0.296;AN=54;BaseQRankSum=10.484;DP=655;FS=3.088;HRun=0;HaplotypeScore=140.0548;InbreedingCoeff=0.1971;MQ=48.19;MQ0=27;MQRankSum=-2.833;QD=7.37;ReadPosRankSum=0.191;VQSLOD=2.3376;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:58,1:57:17.59:357,0,18	0/0:5,0:5:4.61:0,5,18	./.	0/0:43,0:3:5.99:0,6,48	0/0:13,0:12:18:0,18,254	0/0:18,0:18:39.87:0,40,537	0/0:36,0:36:87.02:0,87,1147	0/1:32,0:29:99:140,0,178	0/0:9,0:9:17.97:0,18,189	0/1:25,0:24:99:209,0,134	1/1:7,0:7:1.55:5,2,0	0/0:22,0:22:53.94:0,54,678	0/0:11,0:11:21.03:0,21,323	0/0:20,0:19:44.95:0,45,593	0/0:13,0:13:24.01:0,24,296	0/0:13,0:13:35.63:0,36,449	0/1:30,0:30:73.82:113,0,74	0/1:16,0:16:41.41:41,0,95	0/1:18,0:15:41.64:91,0,42	1/1:21,0:20:8.40:220,8,0	0/1:56,2:56:22.47:373,0,22	0/0:20,0:20:30.04:0,30,447	0/0:11,0:11:23.54:0,24,255	0/0:48,0:48:99:0,121,1733	0/0:19,0:17:31.29:0,31,442	0/1:28,1:29:39.48:346,0,39	1/1:18,2:19:33.65:411,34,0	1/1:10,1:12:24.59:286,25,0
chr10	86657142	.	C	CAT	1550.18	PASS	AB=0.985;AC=16;AF=0.286;AN=56;BaseQRankSum=10.312;DP=655;FS=5.373;HRun=0;HaplotypeScore=121.0689;InbreedingCoeff=0.1658;MQ=48.47;MQ0=25;MQRankSum=-0.005;QD=4.68;ReadPosRankSum=0.599;VQSLOD=2.7884;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:60,1:58:41.47:174,0,41	0/0:5,0:5:4.61:0,5,18	0/0:24,0:1:2.80:0,3,13	0/0:41,0:4:5.99:0,6,50	0/0:12,0:11:18.04:0,18,233	0/0:19,0:19:42.76:0,43,474	0/0:36,0:36:87.46:0,87,987	0/1:33,0:30:91.31:91,0,208	0/0:9,0:9:17.92:0,18,157	0/1:24,1:24:99:100,0,143	1/1:7,0:7:1.55:4,2,0	0/0:22,0:22:53.95:0,54,600	0/0:10,0:10:20.77:0,21,273	0/0:22,0:21:47.91:0,48,522	0/0:13,0:13:23.98:0,24,245	0/0:14,0:14:17.81:0,18,367	0/1:30,0:30:63.80:83,0,64	0/1:17,0:17:25.92:26,0,78	0/1:19,0:15:47.20:47,0,77	1/1:19,1:19:3.41:175,3,0	0/1:57,2:57:46.52:300,0,47	0/0:19,0:19:30.05:0,30,389	0/0:11,0:11:23.99:0,24,266	0/0:49,0:49:99:0,106,1483	0/0:18,0:16:36.03:0,36,420	0/1:27,1:28:89.97:169,0,90	1/1:19,1:19:26.61:347,27,0	1/1:12,0:12:26.04:200,26,0
chr10	86657160	.	CACACGG	C	4056.26	PASS	AB=0.953;AC=14;AF=0.250;AN=56;BaseQRankSum=2.458;DP=613;FS=7.566;HRun=0;HaplotypeScore=139.9626;InbreedingCoeff=0.1703;MQ=58.83;MQ0=9;MQRankSum=2.222;QD=15.78;ReadPosRankSum=2.877;VQSLOD=2.2969;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:56,0:54:27.73:28,0,144	0/1:8,0:8:1.28:89,0,1	0/0:12,0:6:17.94:0,18,196	0/0:20,0:10:9.06:0,9,219	0/0:11,0:11:24.08:0,24,592	0/0:20,0:20:45.29:0,45,1043	0/0:35,0:35:65.19:0,65,2066	1/1:2,20:21:30.75:599,31,0	0/0:13,0:13:33.05:0,33,596	0/1:27,0:26:99:408,0,215	0/1:8,0:8:0:0,0,0	0/0:22,0:22:54.18:0,54,1339	0/0:12,0:12:27.98:0,28,670	0/0:23,0:22:47.89:0,48,1008	0/0:19,0:19:30.29:0,30,650	0/0:15,0:15:45.01:0,45,889	0/1:30,0:30:99:100,0,191	0/1:17,0:17:99:230,0,220	0/1:6,13:16:36.41:585,0,36	1/1:16,0:16:31.38:479,31,0	0/0:20,35:55:7.22:0,7,498	0/0:18,0:18:36.12:0,36,882	0/0:15,0:15:29.31:0,29,538	0/0:46,0:46:99:0,132,3360	0/0:20,0:18:42.14:0,42,952	0/1:24,0:24:99:757,0,256	0/1:15,1:16:99:268,0,125	0/1:14,0:14:7.42:513,0,7
chr10	86657164	.	CGG	C	3728.24	PASS	AB=1.000;AC=23;AF=0.426;AN=54;BaseQRankSum=9.135;DP=603;FS=5.173;HRun=8;HaplotypeScore=101.9360;InbreedingCoeff=0.8900;MQ=64.88;MQ0=8;MQRankSum=0.637;QD=13.51;ReadPosRankSum=5.137;VQSLOD=0.7660;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:38,2:39:3.91:107,4,0	1/1:8,0:8:8.05:100,8,0	0/0:14,0:8:20.29:0,20,268	0/0:23,0:13:14.74:0,15,279	0/0:12,0:12:27.08:0,27,419	0/0:16,0:16:35.96:0,36,488	0/0:34,0:34:77.02:0,77,1222	1/1:21,0:20:45.03:507,45,0	0/0:17,0:17:48.01:0,48,684	1/1:7,18:25:33.38:505,33,0	./.	0/0:26,0:26:60.19:0,60,909	0/0:19,0:19:43.01:0,43,644	0/0:27,0:26:62.12:0,62,897	0/0:21,0:21:47.89:0,48,600	0/0:15,0:15:32.77:0,33,425	1/1:29,0:29:20.46:190,20,0	1/1:14,0:14:29.65:284,30,0	1/1:18,0:16:36.07:395,36,0	1/1:17,1:18:42.10:476,42,0	0/1:48,0:48:14.31:30,0,14	0/0:19,0:19:36.11:0,36,550	0/0:12,0:13:29.29:0,29,420	0/0:42,0:42:99:0,120,1790	0/0:23,0:21:40.64:0,41,584	1/1:25,1:26:42.58:504,43,0	1/1:16,0:16:30.23:304,30,0	1/1:13,0:13:31.30:326,31,0
chr10	86657171	.	GGT	G	959.34	PASS	AB=0.876;AC=12;AF=0.214;AN=56;BaseQRankSum=11.874;DP=579;FS=11.348;HRun=0;HaplotypeScore=97.1953;InbreedingCoeff=-0.0549;MQ=72.43;MQ0=4;MQRankSum=1.555;QD=4.40;ReadPosRankSum=6.278;VQSLOD=1.1320;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,26:37:35.34:71,0,35	1/1:0,5:5:8.62:76,9,0	0/0:16,0:10:25.95:0,26,407	0/0:29,0:19:44.69:0,45,576	0/0:13,0:13:29.06:0,29,462	0/0:14,0:14:41.72:0,42,555	0/0:35,0:35:43.21:0,43,1202	0/1:26,0:26:89.03:89,0,161	0/0:19,0:19:57.08:0,57,833	0/1:22,0:22:45.32:120,0,45	0/0:5,5:10:17.71:0,18,119	0/0:22,0:22:66.18:0,66,972	0/0:17,0:17:47.88:0,48,661	0/0:27,0:26:74.67:0,75,1030	0/0:22,0:22:59.05:0,59,759	0/0:11,0:11:16.19:0,16,412	0/1:7,21:28:23.80:104,0,24	0/1:12,3:15:23.95:133,0,24	0/1:17,0:16:39.20:98,0,39	0/1:17,1:18:5.76:152,0,6	0/0:42,0:42:5.75:0,6,101	0/0:15,0:15:42.11:0,42,616	0/0:13,0:13:32.57:0,33,478	0/0:41,0:41:99:0,106,1720	0/0:15,0:15:39:0,39,611	0/1:21,1:22:90.58:91,0,97	0/1:12,1:13:33.14:89,0,33	0/1:13,1:14:43.86:91,0,44
chr10	86658641	.	TTC	T	3602.42	PASS	AB=0.538;AC=13;AF=0.232;AN=56;BaseQRankSum=14.272;DP=532;FS=5.335;HRun=0;HaplotypeScore=89.7281;InbreedingCoeff=0.9011;MQ=65.88;MQ0=0;MQRankSum=-9.706;QD=29.53;ReadPosRankSum=0.670;VQSLOD=4.8939;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.30:0,96,1611	0/0:11,0:11:30.10:0,30,532	0/0:16,0:16:39.04:0,39,593	0/0:20,0:20:49.07:0,49,738	0/0:31,0:31:90.31:0,90,1596	0/0:13,0:13:36.12:0,36,639	0/0:16,0:16:45.14:0,45,769	1/1:1,20:20:54.07:640,54,0	0/0:25,0:25:75.21:0,75,1287	0/0:25,0:25:72.24:0,72,1250	0/0:18,0:18:48.16:0,48,851	0/0:16,0:16:45.15:0,45,797	0/0:12,0:12:27.09:0,27,473	0/0:12,0:12:36.12:0,36,630	0/0:15,0:15:45.13:0,45,734	0/0:9,0:9:24.08:0,24,426	0/0:31,0:31:87.28:0,87,1508	0/0:19,0:19:33.25:0,33,854	1/1:2,6:8:18:194,18,0	1/1:1,28:29:54.14:718,54,0	1/1:1,18:19:39.04:492,39,0	0/0:27,0:27:75.26:0,75,1310	0/0:28,0:28:78.20:0,78,1227	0/0:21,0:21:57.20:0,57,1011	0/0:9,0:9:27.09:0,27,479	0/1:2,12:14:14.12:455,0,14	1/1:1,19:20:51.13:675,51,0	1/1:0,11:11:33.07:428,33,0
chr10	86663045	.	GT	G	4308.55	PASS	AB=0.933;AC=15;AF=0.268;AN=56;BaseQRankSum=16.585;DP=585;FS=3.042;HRun=8;HaplotypeScore=75.5533;InbreedingCoeff=0.9453;MQ=78.21;MQ0=0;MQRankSum=-2.462;QD=22.32;ReadPosRankSum=-0.115;VQSLOD=5.2839;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,102,1194	0/0:10,0:10:30.09:0,30,362	0/1:13,1:13:1.44:1,0,215	0/0:15,0:15:24.23:0,24,340	0/0:21,0:21:51.15:0,51,611	0/0:14,0:14:36.11:0,36,435	0/0:19,0:19:45.14:0,45,543	1/1:6,32:38:99:937,99,0	0/0:17,0:17:48.14:0,48,570	0/0:23,0:23:54.11:0,54,626	0/0:12,0:12:30.08:0,30,354	0/0:19,0:19:51.16:0,51,616	0/0:20,0:20:54.17:0,54,652	0/0:13,0:13:39.12:0,39,471	0/0:19,0:19:48.15:0,48,580	0/0:12,0:12:36.09:0,36,421	0/0:44,0:44:99:0,126,1522	0/0:11,0:11:30.09:0,30,362	1/1:3,16:19:48.04:455,48,0	1/1:3,15:18:45.07:433,45,0	1/1:5,28:33:75.11:724,75,0	0/0:20,0:20:57.17:0,57,689	0/0:22,0:22:63.19:0,63,761	0/0:27,0:27:78.21:0,78,927	0/0:13,0:13:36.11:0,36,433	1/1:5,29:34:53.90:803,54,0	1/1:0,15:15:39.06:376,39,0	1/1:1,21:22:60.10:579,60,0
chr10	86663396	.	GCACA	G	4717.02	PASS	AB=0.595;AC=18;AF=0.321;AN=56;BaseQRankSum=3.830;DP=842;FS=6.307;HRun=0;HaplotypeScore=169.3152;InbreedingCoeff=0.5923;MQ=57.93;MQ0=19;MQRankSum=-0.678;QD=16.97;ReadPosRankSum=0.112;VQSLOD=4.2592;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,2:52:12.82:0,13,1961	0/1:4,1:9:31.37:68,0,31	0/0:49,0:15:6.02:0,6,113	0/0:51,0:25:17.87:0,18,270	0/0:21,0:22:47.38:0,47,1016	0/0:25,0:27:51.16:0,51,1080	0/0:34,1:36:5.03:0,5,1129	1/1:10,9:17:15.05:240,15,0	0/0:28,0:30:62.95:0,63,1425	0/0:14,0:31:53:0,53,344	0/1:2,1:10:29.08:29,0,81	0/0:33,0:35:87.03:0,87,1926	0/0:17,0:18:41.85:0,42,861	0/0:20,0:20:48.16:0,48,1084	0/0:39,0:42:46.72:0,47,1731	0/0:28,0:32:71.59:0,72,1346	0/1:14,2:40:69.03:69,0,255	0/1:9,3:34:99:133,0,194	1/1:12,2:12:3.01:49,3,0	1/1:6,10:16:23.99:388,24,0	1/1:42,39:79:99:1878,101,0	0/0:23,0:25:42.88:0,43,1232	0/0:20,0:22:41.60:0,42,842	0/0:49,0:55:99:0,116,2257	0/0:14,0:17:38.60:0,39,703	1/1:10,22:34:68.61:1225,69,0	1/1:3,10:13:30.10:490,30,0	1/1:2,5:7:9.03:147,9,0
chr10	86663476	.	A	ACG	6320.85	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-5.965;DP=754;FS=10.487;HRun=0;HaplotypeScore=134.9180;InbreedingCoeff=0.9727;MQ=59.31;MQ0=15;MQRankSum=-1.868;QD=31.29;ReadPosRankSum=-0.048;VQSLOD=5.9583;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:84.72:0,85,1437	0/0:7,0:7:15.05:0,15,228	0/0:35,0:14:35.71:0,36,351	0/0:48,0:16:35.59:0,36,454	0/0:21,0:21:49.84:0,50,722	0/0:23,0:23:33.27:0,33,524	0/0:31,0:31:81.56:0,82,1141	1/1:24,4:28:71.94:1047,72,0	0/0:28,0:28:78.17:0,78,1099	0/0:24,0:24:54.13:0,54,747	0/0:11,0:11:27.08:0,27,381	0/0:32,0:32:83.23:0,83,1078	0/0:19,0:19:56.79:0,57,691	0/0:23,0:23:60.16:0,60,845	0/0:24,0:24:66.11:0,66,893	0/0:27,0:27:75.12:0,75,989	0/0:36,0:36:84.73:0,85,1229	0/0:31,0:31:81.19:0,81,1145	1/1:2,21:23:63.01:898,63,0	1/1:6,10:16:28.69:664,29,0	1/1:16,72:90:17.42:1956,17,0	0/0:23,0:23:63.15:0,63,881	0/0:10,0:10:24.04:0,24,305	0/0:38,0:38:99:0,99,1374	0/0:17,0:17:48.14:0,48,688	1/1:6,23:28:15.78:1160,16,0	1/1:2,12:14:27.04:480,27,0	1/1:0,2:2:6.02:115,6,0
chr10	86663526	.	TACACAC	T	392.96	PASS	AB=0.872;AC=9;AF=0.173;AN=52;BaseQRankSum=1.918;DP=760;FS=20.499;HRun=0;HaplotypeScore=200.5330;InbreedingCoeff=0.2952;MQ=54.26;MQ0=15;MQRankSum=0.601;QD=2.28;ReadPosRankSum=-2.295;VQSLOD=1.2113;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:43:61.56:0,62,710	1/1:4,7:11:4.89:21,5,0	./.	./.	0/0:15,0:15:25.57:0,26,520	0/0:28,0:28:47.96:0,48,1102	0/1:34,0:34:12.32:12,0,596	0/0:27,0:22:15.90:0,16,125	0/0:32,0:33:45.99:0,46,943	0/1:11,10:20:0.36:128,0,0	1/1:5,2:7:2.90:47,3,0	0/0:29,0:30:43.12:0,43,773	0/0:24,0:24:35.77:0,36,659	0/0:22,0:23:37.01:0,37,767	0/0:33,0:34:60.29:0,60,1189	0/0:27,0:27:44.74:0,45,917	0/1:22,19:41:11.90:135,0,12	0/1:25,0:25:34.97:106,0,35	0/0:13,0:12:8.06:0,8,103	0/0:17,0:16:10.55:0,11,339	0/0:105,0:105:74.80:0,75,1470	0/0:30,0:30:47.90:0,48,740	0/0:12,0:13:16.14:0,16,499	0/0:49,0:49:90.08:0,90,2057	0/0:15,0:15:26.11:0,26,524	0/1:33,0:33:77.72:78,0,477	0/0:16,0:16:19.12:0,19,282	0/0:7,0:7:9.50:0,10,180
chr10	86663528	.	C	CAT	1239.51	PASS	AB=0.928;AC=8;AF=0.143;AN=56;BaseQRankSum=7.355;DP=771;FS=8.665;HRun=0;HaplotypeScore=156.2325;InbreedingCoeff=-0.0724;MQ=54.02;MQ0=16;MQRankSum=-0.799;QD=4.68;ReadPosRankSum=-0.361;VQSLOD=2.5841;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:43:28.65:29,0,400	0/0:11,0:11:6.34:0,6,35	0/0:16,0:2:5.91:0,6,51	0/0:23,0:6:7.58:0,8,66	0/0:15,0:15:41.06:0,41,441	0/0:27,0:27:57.89:0,58,657	0/0:34,0:34:22.70:0,23,560	0/1:27,0:22:99:160,0,105	0/0:33,0:33:74.93:0,75,708	0/0:21,0:20:49.71:0,50,403	0/0:7,0:7:8.77:0,9,71	0/0:29,0:29:41.06:0,41,612	0/0:27,0:27:16.65:0,17,335	0/0:25,0:25:59.76:0,60,628	0/0:34,0:34:73.24:0,73,848	0/0:28,0:28:56.70:0,57,681	0/0:40,0:40:40.38:0,40,316	0/0:25,0:25:58.49:0,58,477	0/1:12,1:12:33.23:33,0,69	0/1:17,0:16:42.52:138,0,43	0/1:103,4:107:99:453,0,340	0/0:32,0:32:65.60:0,66,713	0/0:16,0:15:33:0,33,372	0/0:49,0:49:99:0,102,1343	0/0:14,0:14:28.87:0,29,349	0/1:32,2:34:99:291,0,251	0/1:14,2:16:7.87:142,0,8	0/1:4,3:7:3.06:128,0,3
chr10	86663667	.	TG	T	6543.05	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=14.854;DP=606;FS=23.054;HRun=1;HaplotypeScore=66.3594;InbreedingCoeff=0.9147;MQ=68.35;MQ0=0;MQRankSum=-0.356;QD=38.26;ReadPosRankSum=-3.597;VQSLOD=2.2854;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,1958	0/0:12,0:12:36.12:0,36,575	0/1:7,0:7:6.80:7,0,111	0/0:7,1:8:9.26:0,9,155	0/0:22,0:22:63.21:0,63,1006	0/0:24,0:24:72.25:0,72,1147	0/0:25,0:25:75.24:0,75,1158	1/1:0,32:32:90.24:1219,90,0	0/0:29,0:29:87.28:0,87,1363	0/0:22,0:22:66.23:0,66,1055	0/0:21,0:21:63.21:0,63,995	0/0:23,0:23:69.22:0,69,1054	0/0:14,0:14:42.13:0,42,645	0/0:14,0:14:42.14:0,42,671	0/0:19,0:19:54.15:0,54,815	0/0:21,0:21:63.21:0,63,1006	0/0:28,0:28:84.26:0,84,1306	0/0:21,0:21:63.19:0,63,976	1/1:0,14:14:42.06:515,42,0	1/1:0,16:16:48.12:649,48,0	1/1:6,35:41:99:1639,123,0	0/0:26,0:26:78.21:0,78,1148	0/0:26,0:26:78.27:0,78,1238	0/0:24,0:24:72.25:0,72,1149	0/0:14,0:14:39.12:0,39,599	1/1:0,29:29:87.29:1214,87,0	1/1:0,18:18:51.17:713,51,0	1/1:0,14:14:42.14:587,42,0
chr10	86665006	.	TC	T	148.20	PASS	AC=12;AF=0.250;AN=48;BaseQRankSum=-1.267;DP=51;FS=0.000;HRun=3;HaplotypeScore=7.7127;InbreedingCoeff=0.3944;MQ=43.16;MQ0=1;MQRankSum=-1.760;QD=16.47;ReadPosRankSum=0.543;VQSLOD=2.8743;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:6.02:0,6,86	./.	./.	0/0:3,0:3:5.98:0,6,63	0/0:4,0:4:9.03:0,9,123	0/0:5,0:5:15.05:0,15,214	0/0:4,0:4:6.02:0,6,86	1/1:0,3:3:9.03:111,9,0	0/0:1,0:1:3.01:0,3,42	0/0:3,0:3:9.03:0,9,130	0/0:2,0:2:3.01:0,3,43	0/0:1,0:1:3.01:0,3,43	0/0:1,0:1:3.01:0,3,43	0/0:1,0:1:3.01:0,3,43	0/0:2,0:2:6.02:0,6,86	0/0:1,0:1:3.01:0,3,43	0/0:4,0:4:9.03:0,9,120	0/0:1,0:1:3.01:0,3,36	1/1:1,1:1:3.01:37,3,0	./.	1/1:0,1:1:3.01:37,3,0	./.	0/0:2,0:2:3.01:0,3,43	0/0:3,0:3:6.02:0,6,86	0/0:1,0:1:3.01:0,3,43	1/1:0,1:1:3.01:37,3,0	1/1:0,1:1:2.92:17,3,0	1/1:0,1:1:3.01:37,3,0
chr10	86665674	.	GT	G	2203.29	PASS	AB=0.556;AC=13;AF=0.232;AN=56;BaseQRankSum=10.021;DP=487;FS=5.374;HRun=9;HaplotypeScore=54.6402;InbreedingCoeff=0.8687;MQ=79.12;MQ0=0;MQRankSum=0.717;QD=18.21;ReadPosRankSum=1.245;VQSLOD=3.7318;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:60.18:0,60,692	0/0:2,0:2:6.02:0,6,69	0/0:28,0:24:34.44:0,34,396	0/0:27,0:20:11.70:0,12,306	0/0:16,0:16:43.37:0,43,487	0/0:24,0:24:66.20:0,66,762	0/0:17,0:17:48.13:0,48,543	1/1:8,15:22:32.86:387,33,0	0/0:16,0:16:42.11:0,42,474	0/0:21,0:21:60.17:0,60,683	0/0:5,0:5:12.04:0,12,138	0/0:17,0:17:45.11:0,45,502	0/0:10,0:10:24.07:0,24,276	0/0:14,0:14:42.12:0,42,478	0/0:17,0:17:51.15:0,51,588	0/0:20,0:20:57.15:0,57,641	0/0:31,0:31:84.24:0,84,959	0/0:16,0:16:39.59:0,40,451	1/1:3,14:17:42.02:384,42,0	1/1:2,12:14:35.97:321,36,0	1/1:5,18:23:51.02:467,51,0	0/0:12,0:12:36.11:0,36,415	0/0:17,0:17:48.14:0,48,550	0/0:14,0:14:33.07:0,33,361	0/0:15,0:15:42.12:0,42,485	0/1:4,15:20:19.50:340,0,20	1/1:0,16:16:35.73:329,36,0	1/1:1,7:8:18.01:165,18,0
chr10	86666703	.	C	CA	6841.37	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.089;DP=698;FS=1.065;HRun=1;HaplotypeScore=101.7243;InbreedingCoeff=0.9944;MQ=84.40;MQ0=0;MQRankSum=-2.642;QD=38.43;ReadPosRankSum=-2.391;VQSLOD=4.1292;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1543	0/0:14,0:14:36.12:0,36,467	0/0:21,0:21:54.17:0,54,695	0/0:24,0:23:57.64:0,58,705	0/0:19,0:19:57.15:0,57,710	0/0:24,0:24:66.21:0,66,856	0/0:23,0:23:66.20:0,66,842	1/1:2,20:22:66.15:900,66,0	0/0:37,0:37:99:0,105,1347	0/0:24,0:24:72.23:0,72,934	0/0:10,0:10:30.10:0,30,389	0/0:26,0:26:78.24:0,78,988	0/0:25,0:25:75.19:0,75,926	0/0:29,0:29:84.26:0,84,1076	0/0:27,0:27:75.22:0,75,958	0/0:26,0:26:78.25:0,78,1013	0/0:35,0:35:99:0,99,1284	0/0:30,0:30:87.28:0,87,1130	1/1:4,16:20:60.16:840,60,0	1/1:5,19:24:57.19:854,57,0	1/1:1,49:50:99:1889,126,0	0/0:22,0:22:66.21:0,66,857	0/0:15,0:15:45.13:0,45,570	0/0:27,0:27:75.23:0,75,959	0/0:21,0:21:57.19:0,57,740	1/1:4,26:30:12.27:1109,12,0	1/1:3,17:21:54.18:801,54,0	1/1:1,10:11:30.10:449,30,0
chr10	86666837	.	A	ACG	8537.72	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=16.117;DP=752;FS=6.338;HRun=0;HaplotypeScore=108.9183;InbreedingCoeff=0.9643;MQ=60.77;MQ0=0;MQRankSum=-2.021;QD=45.17;ReadPosRankSum=1.036;VQSLOD=5.9975;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.05:0,81,1244	0/0:11,0:11:30.09:0,30,458	0/0:16,0:11:6.39:0,6,209	0/0:9,0:7:6.30:0,6,115	0/0:23,0:23:66.23:0,66,1066	0/0:30,0:30:84.27:0,84,1341	0/0:26,0:26:78.27:0,78,1269	1/1:1,36:39:99:1937,113,0	0/0:31,0:31:87.24:0,87,1310	0/0:41,0:41:99:0,117,1823	0/0:30,0:30:81.18:0,81,1254	0/0:25,0:25:66.23:0,66,1064	0/0:27,0:27:81.21:0,81,1279	0/0:24,0:24:69.22:0,69,1094	0/0:37,0:37:99:0,108,1736	0/0:30,0:30:90.29:0,90,1440	0/0:25,0:25:72.22:0,72,1143	0/0:20,0:20:60.18:0,60,933	1/1:2,13:15:36.04:616,36,0	1/1:0,25:26:45.15:908,45,0	1/1:2,36:38:83.18:1643,83,0	0/0:36,0:36:99:0,99,1555	0/0:30,0:30:90.27:0,90,1407	0/0:27,0:27:78.27:0,78,1271	0/0:35,0:35:99:0,102,1604	1/1:1,31:32:81.28:1623,81,0	1/1:0,27:27:65.99:1326,66,0	1/1:0,11:11:24.08:486,24,0
chr10	86667216	.	A	ATGAG	712.64	PASS	AB=0.859;AC=4;AF=0.071;AN=56;BaseQRankSum=6.872;DP=830;FS=1.937;HRun=0;HaplotypeScore=170.0647;InbreedingCoeff=-0.0831;MQ=52.79;MQ0=30;MQRankSum=-5.284;QD=9.38;ReadPosRankSum=-4.106;VQSLOD=1.7753;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,159,3190	0/0:11,0:11:4.75:0,5,140	0/0:78,0:18:37.43:0,37,657	0/0:71,0:18:30.39:0,30,460	0/0:26,0:26:72.23:0,72,1427	0/0:24,0:24:69.24:0,69,1417	0/0:29,0:28:69.21:0,69,1336	0/1:22,0:23:99:200,0,930	0/0:42,0:41:99:0,114,2313	0/0:28,0:27:75.17:0,75,1364	0/0:23,0:23:20.76:0,21,340	0/0:35,0:34:90.25:0,90,1747	0/0:19,0:19:48.14:0,48,967	0/0:23,0:23:62.92:0,63,1290	0/0:26,0:26:75.26:0,75,1512	0/0:26,0:26:72.24:0,72,1398	0/0:27,0:27:41.40:0,41,552	0/0:23,0:23:54.15:0,54,924	0/0:19,0:16:34:0,34,667	0/0:20,0:19:14.61:0,15,248	0/0:35,1:35:24.02:0,24,482	0/0:21,0:21:51.17:0,51,1025	0/0:28,0:28:78.27:0,78,1598	0/0:48,0:48:99:0,138,2608	0/0:13,0:13:39.13:0,39,791	0/1:25,2:27:99:299,0,737	0/1:9,2:11:37.04:37,0,157	0/1:9,5:13:99:286,0,121
chr10	86667230	.	ACGCATGAG	A	2118.01	PASS	AB=0.893;AC=8;AF=0.148;AN=54;BaseQRankSum=6.706;DP=755;FS=16.732;HRun=0;HaplotypeScore=196.1301;InbreedingCoeff=0.0306;MQ=54.61;MQ0=24;MQRankSum=-5.707;QD=15.13;ReadPosRankSum=-5.672;VQSLOD=-0.4776;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,135,5105	0/1:9,0:9:21.15:21,0,270	0/0:56,0:14:11.43:0,11,680	0/0:67,0:21:44.80:0,45,1077	0/0:27,0:27:71.82:0,72,2706	0/0:22,0:22:38.28:0,38,2397	0/0:30,0:29:72.23:0,72,2652	0/1:16,12:27:99:684,0,1038	0/0:38,0:37:99:0,99,4069	0/0:25,0:24:28.31:0,28,2300	0/0:18,0:18:23.77:0,24,892	0/0:26,0:25:48.01:0,48,1752	0/0:17,0:17:47.52:0,48,1359	0/0:23,0:23:66.23:0,66,2708	0/0:23,0:23:66.18:0,66,2454	0/0:22,0:22:51.07:0,51,1758	0/0:24,0:24:3.30:0,3,1491	0/0:23,0:23:28.07:0,28,1669	0/1:20,0:17:99:350,0,288	./.	1/1:34,0:34:3.96:28,4,0	0/0:25,0:25:44.27:0,44,2488	0/0:24,0:24:69.22:0,69,2749	0/0:44,0:44:55.50:0,56,4571	0/0:15,0:15:45.15:0,45,1668	0/1:11,13:25:99:821,0,460	0/1:10,0:10:75.27:75,0,128	0/1:14,0:13:49.03:270,0,49
chr10	86667234	.	ATGAG	A	1643.80	PASS	AB=0.857;AC=10;AF=0.179;AN=56;BaseQRankSum=8.998;DP=708;FS=11.642;HRun=0;HaplotypeScore=146.9971;InbreedingCoeff=0.0287;MQ=55.32;MQ0=22;MQRankSum=-5.455;QD=9.84;ReadPosRankSum=-4.171;VQSLOD=1.1283;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,1:45:99:0,129,3594	0/1:9,0:9:0.50:0,0,230	0/0:55,0:12:32.71:0,33,538	0/0:63,0:22:33.61:0,34,894	0/0:25,0:25:72.19:0,72,1975	0/0:21,0:21:63.22:0,63,1763	0/0:26,0:25:69.24:0,69,1902	0/1:25,2:26:99:536,0,803	0/0:35,0:35:99:0,102,2889	0/0:24,0:23:65.27:0,65,1738	0/0:21,0:21:33.05:0,33,903	0/0:20,0:19:48.14:0,48,1371	0/0:16,0:16:39.09:0,39,934	0/0:24,0:24:69.24:0,69,1911	0/0:22,0:22:63.22:0,63,1780	0/0:17,0:17:48.15:0,48,1313	0/1:28,0:28:1.46:1,0,1371	0/0:21,0:21:47.46:0,47,1352	0/1:8,5:11:99:232,0,248	0/1:13,1:13:0:0,0,0	1/1:8,16:24:0.08:1,0,0	0/0:25,0:25:69.23:0,69,1868	0/0:22,0:22:66.23:0,66,1905	0/0:44,0:44:79.57:0,80,3243	0/0:15,0:15:45.15:0,45,1222	0/1:21,4:25:99:633,0,381	0/1:8,2:10:77.02:77,0,101	0/1:5,11:15:79.54:280,0,80
chr10	86667238	.	G	GCACACACACACACACACA	7356.68	PASS	AB=0.704;AC=13;AF=0.232;AN=56;BaseQRankSum=7.032;DP=721;FS=3.136;HRun=0;HaplotypeScore=314.8417;InbreedingCoeff=0.9307;MQ=55.86;MQ0=21;MQRankSum=-10.343;QD=49.37;ReadPosRankSum=-5.405;VQSLOD=2.9224;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,99,4202	0/0:9,0:9:5.77:0,6,245	0/0:53,0:12:30.09:0,30,598	0/0:62,0:23:39.20:0,39,1089	0/0:26,0:26:63.22:0,63,2673	0/0:20,0:20:42.13:0,42,1858	0/0:23,0:24:57.19:0,57,2383	1/1:33,0:32:64.56:2086,65,0	0/0:35,0:35:81.28:0,81,3746	0/0:24,0:23:56.94:0,57,2175	0/0:21,0:21:31.12:0,31,1270	0/0:19,0:18:39.05:0,39,1568	0/0:16,0:17:33.04:0,33,1179	0/0:23,0:23:59.53:0,60,2808	0/0:21,0:21:48.03:0,48,2220	0/0:16,0:17:42.13:0,42,1685	0/0:28,0:28:54.18:0,54,1848	0/0:21,0:21:48.14:0,48,2005	1/1:18,0:15:25.62:695,26,0	0/1:11,5:18:0.22:1,0,0	1/1:28,0:28:8.88:333,9,0	0/0:27,0:27:56.74:0,57,2247	0/0:22,0:22:54.18:0,54,2407	0/0:42,0:42:98.56:0,99,4352	0/0:14,0:15:39.12:0,39,1452	1/1:25,0:25:52.72:2020,53,0	1/1:9,0:11:21.53:1029,22,0	1/1:15,0:14:24.08:1193,24,0
chr10	86667394	.	CTTTT	C	1112.32	PASS	AB=0.655;AC=12;AF=0.214;AN=56;BaseQRankSum=6.192;DP=522;FS=0.000;HRun=17;HaplotypeScore=94.8811;InbreedingCoeff=0.7467;MQ=62.99;MQ0=7;MQRankSum=-2.154;QD=9.51;ReadPosRankSum=3.578;VQSLOD=-0.6014;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:44:91.21:0,91,1043	0/0:4,0:3:6.01:0,6,93	0/0:23,0:7:11.82:0,12,116	0/0:17,0:8:0:0,0,0	0/0:24,0:27:57.94:0,58,661	0/0:10,0:10:24.06:0,24,363	0/0:16,0:20:50.34:0,50,743	0/1:13,11:24:4.03:302,0,4	0/0:11,0:11:25.28:0,25,357	0/0:28,0:29:68.95:0,69,880	0/0:16,0:18:41.40:0,41,590	0/0:10,0:9:9.02:0,9,150	0/0:11,0:11:27.62:0,28,367	0/0:13,0:13:28.26:0,28,370	0/0:11,0:10:18.84:0,19,256	0/0:17,0:18:36.03:0,36,591	0/0:25,0:25:63:0,63,950	0/0:31,0:32:74.96:0,75,1241	1/1:10,8:18:4.27:199,4,0	1/1:11,2:13:18.87:172,19,0	1/1:5,9:14:5.96:72,6,0	0/0:14,0:15:24.02:0,24,344	0/0:11,0:12:25.48:0,25,300	0/0:23,0:23:41.42:0,41,642	0/0:24,0:26:65.02:0,65,882	1/1:11,12:23:31:279,31,0	0/1:6,9:15:1.66:102,0,2	1/1:3,6:9:11.99:152,12,0
chr10	86667614	.	AC	A	2703.57	PASS	AB=0.941;AC=15;AF=0.268;AN=56;BaseQRankSum=6.988;DP=560;FS=7.636;HRun=9;HaplotypeScore=61.4837;InbreedingCoeff=0.8668;MQ=75.84;MQ0=0;MQRankSum=-2.948;QD=16.90;ReadPosRankSum=2.070;VQSLOD=3.5514;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:60.13:0,60,655	0/0:9,0:9:15.04:0,15,173	0/0:12,0:12:6.63:0,7,217	0/0:21,0:20:26.58:0,27,272	0/0:18,0:18:51.04:0,51,550	0/0:12,0:12:8.88:0,9,343	0/0:29,0:29:72.08:0,72,811	1/1:4,9:14:29.01:244,29,0	0/0:28,0:28:53.95:0,54,859	0/0:24,1:26:35.52:0,36,620	0/1:15,1:16:0.40:0,0,240	0/0:21,0:21:60.18:0,60,692	0/0:13,0:13:11.95:0,12,363	0/0:20,1:21:26.69:0,27,551	0/0:25,0:25:69.20:0,69,796	0/0:17,0:18:50.98:0,51,566	0/0:42,0:42:99:0,120,1338	0/0:14,0:14:39.12:0,39,450	1/1:4,12:16:39:351,39,0	1/1:1,2:3:8.91:65,9,0	1/1:12,38:50:99:987,108,0	0/0:14,0:14:2.58:0,3,267	0/0:15,0:15:36.11:0,36,416	0/0:22,1:23:35.60:0,36,637	0/0:12,0:11:30.08:0,30,337	1/1:5,14:18:10.40:349,10,0	1/1:11,16:27:62.99:568,63,0	1/1:6,9:15:36.02:328,36,0
chr10	86668347	.	C	CAGG	6934.16	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=2.303;DP=725;FS=4.019;HRun=0;HaplotypeScore=108.3748;InbreedingCoeff=0.9979;MQ=54.99;MQ0=5;MQRankSum=-8.632;QD=45.32;ReadPosRankSum=-1.632;VQSLOD=6.3413;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:55:99:0,128,1931	0/0:19,0:19:48.14:0,48,739	0/0:23,0:8:23.86:0,24,319	0/0:35,0:14:23.26:0,23,427	0/0:19,0:19:48.14:0,48,722	0/0:26,0:26:69.24:0,69,1109	0/0:30,0:30:75.23:0,75,1159	1/1:6,23:26:57.18:1216,57,0	0/0:37,0:37:99:0,108,1707	0/0:39,0:39:99:0,108,1668	0/0:15,0:15:36.12:0,36,578	0/0:27,0:27:75.19:0,75,1121	0/0:19,0:19:51.10:0,51,767	0/0:25,0:25:66.20:0,66,1012	0/0:29,0:29:84.27:0,84,1326	0/0:22,0:22:60.20:0,60,962	0/0:29,0:29:84.26:0,84,1324	0/0:29,0:29:75.19:0,75,1148	1/1:9,8:14:33.11:682,33,0	1/1:3,12:15:29.99:564,30,0	1/1:6,25:29:60.14:1271,60,0	0/0:20,0:19:45.13:0,45,677	0/0:18,0:18:45.15:0,45,717	0/0:30,0:30:81.18:0,81,1221	0/0:25,0:25:66.22:0,66,1058	1/1:12,19:31:21.07:1397,21,0	1/1:2,19:21:60.16:1276,60,0	1/1:0,8:8:24.08:529,24,0
chr10	86668448	.	T	TA	5601.91	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=2.356;DP=743;FS=0.359;HRun=1;HaplotypeScore=84.3873;InbreedingCoeff=0.9591;MQ=54.20;MQ0=29;MQRankSum=-8.187;QD=33.15;ReadPosRankSum=-4.378;VQSLOD=3.3390;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1432	0/0:8,0:8:24.08:0,24,311	0/0:36,0:6:14.26:0,14,163	0/0:45,0:3:2.96:0,3,19	0/0:15,0:15:45.13:0,45,568	0/0:16,0:16:48.16:0,48,623	0/0:34,0:34:78.23:0,78,985	1/1:2,24:25:72.24:1069,72,0	0/0:25,0:25:72.22:0,72,921	0/0:37,0:37:99:0,108,1389	0/0:10,0:10:24.08:0,24,310	0/0:32,0:32:90.29:0,90,1168	0/0:24,0:24:69.22:0,69,895	0/0:24,0:24:69.22:0,69,896	0/0:26,0:26:72.22:0,72,921	0/0:23,0:23:60.19:0,60,779	0/0:23,0:23:69.22:0,69,896	0/0:27,0:27:75.24:0,75,972	1/1:2,16:15:45.08:624,45,0	1/1:2,17:19:45.15:674,45,0	1/1:3,48:45:93.10:1266,93,0	0/0:32,0:32:81.25:0,81,1037	0/0:26,0:26:66.17:0,66,857	0/0:53,0:53:99:0,147,1879	0/0:17,0:17:51.14:0,51,646	1/1:3,25:27:69.23:1033,69,0	1/1:1,19:20:51:757,51,0	1/1:0,7:7:12.04:180,12,0
chr10	86669700	.	CTTTGCA	C	5799.59	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.093;DP=639;FS=36.756;HRun=0;HaplotypeScore=154.8667;InbreedingCoeff=0.9936;MQ=75.82;MQ0=0;MQRankSum=-12.897;QD=50.00;ReadPosRankSum=-1.609;VQSLOD=2.5239;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,26:31:66.23:1572,66,0	1/1:0,4:4:12.04:288,12,0	0/0:20,0:20:59.87:0,60,1712	0/0:19,0:17:41.94:0,42,1312	0/0:23,0:23:69.24:0,69,2483	0/0:22,0:22:63.22:0,63,2236	0/0:21,0:21:63.20:0,63,2080	0/0:30,0:30:81.28:0,81,2828	0/0:22,0:22:66.22:0,66,2286	1/1:2,23:25:63.20:1424,63,0	1/1:2,19:21:36.12:863,36,0	0/0:18,0:18:54.19:0,54,1915	0/0:19,0:19:57.20:0,57,1947	0/0:16,0:16:48.16:0,48,1674	0/0:35,0:35:99:0,102,3643	0/0:18,0:18:54.19:0,54,1943	1/1:1,18:19:36.12:865,36,0	1/1:2,14:16:33.11:787,33,0	0/0:28,0:28:84.29:0,84,2883	0/0:31,0:31:90.31:0,90,3180	0/0:33,0:33:93.32:0,93,3154	0/0:30,0:30:90.31:0,90,3242	0/0:20,0:20:51.18:0,51,1811	0/0:32,0:32:90.30:0,90,3077	0/0:17,0:17:51.18:0,51,1811	0/0:24,0:24:66.23:0,66,2335	0/0:26,0:26:75.24:0,75,2596	0/0:19,0:19:57.20:0,57,2047
chr10	86670217	.	AG	A	489.52	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.835;DP=661;FS=0.000;HRun=2;HaplotypeScore=68.8191;InbreedingCoeff=0.9989;MQ=92.12;MQ0=0;MQRankSum=-2.519;QD=27.20;ReadPosRankSum=1.624;VQSLOD=3.3258;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,2060	0/0:11,0:11:33.11:0,33,479	0/0:32,0:32:93.30:0,93,1358	0/0:24,0:24:66.13:0,66,920	0/0:24,0:24:72.24:0,72,1077	0/0:11,0:11:33.11:0,33,494	0/0:24,0:23:72.23:0,72,1056	0/0:31,0:31:90.29:0,90,1311	0/0:27,0:27:81.27:0,81,1213	0/0:35,0:35:99:0,105,1524	0/0:20,0:20:60.20:0,60,896	0/0:21,0:21:63.20:0,63,921	0/0:11,0:11:33.11:0,33,492	0/0:22,0:22:63.21:0,63,942	0/0:23,0:23:69.23:0,69,1033	0/0:31,0:31:93.30:0,93,1371	0/0:29,0:29:87.28:0,87,1284	1/1:1,17:18:45.15:584,45,0	0/0:19,0:19:57.19:0,57,855	0/0:17,0:17:51.17:0,51,764	0/0:45,0:45:99:0,129,1931	0/0:21,0:21:63.21:0,63,944	0/0:26,0:26:75.24:0,75,1102	0/0:23,0:23:69.23:0,69,1034	0/0:12,0:12:33.10:0,33,477	0/0:26,0:26:78.26:0,78,1151	0/0:19,0:19:54.18:0,54,808	0/0:13,0:13:39.13:0,39,580
chr10	86670549	.	CCT	C	326.22	PASS	AB=0.786;AC=8;AF=0.143;AN=56;BaseQRankSum=7.104;DP=381;FS=6.462;HRun=0;HaplotypeScore=65.2057;InbreedingCoeff=0.0794;MQ=66.76;MQ0=4;MQRankSum=-6.484;QD=3.23;ReadPosRankSum=-2.127;VQSLOD=0.6869;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:86.30:0,86,1672	0/0:7,0:7:21.07:0,21,426	0/0:19,0:15:45.14:0,45,809	0/0:21,0:15:41.17:0,41,746	0/0:7,0:7:21.07:0,21,427	0/0:8,0:8:17.73:0,18,316	0/0:16,0:16:45.15:0,45,915	0/1:15,6:19:99:163,0,242	0/0:13,0:13:37.01:0,37,733	0/0:17,0:16:42.10:0,42,801	0/0:8,0:8:24.08:0,24,487	0/0:12,0:12:36.12:0,36,708	0/0:6,0:6:18.06:0,18,363	0/0:9,0:9:27.08:0,27,511	0/0:12,0:12:36.11:0,36,675	0/0:14,0:14:42.14:0,42,833	0/0:22,0:22:66.22:0,66,1304	0/0:20,0:20:57.20:0,57,1131	0/1:18,6:22:99:171,0,265	0/1:2,2:4:13.95:23,0,14	0/1:22,6:25:18.85:19,0,114	0/0:3,0:3:9.03:0,9,183	0/0:7,0:7:21.07:0,21,427	0/0:20,0:20:60.21:0,60,1219	0/0:7,0:7:21.07:0,21,427	0/1:11,1:11:16.61:17,0,283	0/1:5,3:8:29.90:30,0,201	1/1:3,1:4:6.07:38,6,0
chr10	86670587	.	CCCTT	C	93.23	PASS	AB=0.924;AC=6;AF=0.107;AN=56;BaseQRankSum=3.925;DP=267;FS=2.168;HRun=0;HaplotypeScore=60.0105;InbreedingCoeff=0.1325;MQ=81.14;MQ0=5;MQRankSum=-3.135;QD=1.58;ReadPosRankSum=-2.328;VQSLOD=1.2291;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.21:0,60,1661	0/0:5,0:5:15.05:0,15,425	0/0:15,0:13:30.17:0,30,857	0/0:24,0:18:45.58:0,46,1065	0/0:4,0:4:12.04:0,12,348	0/0:6,0:6:14.98:0,15,374	0/0:11,0:11:33.11:0,33,957	0/1:12,1:11:32.82:33,0,372	0/0:6,0:6:18.02:0,18,446	0/0:7,0:6:15.05:0,15,397	0/0:5,0:5:15.05:0,15,412	0/0:9,0:9:27.09:0,27,782	0/0:6,0:6:18.06:0,18,515	0/0:5,0:5:15.03:0,15,372	0/0:6,0:6:18.06:0,18,483	0/0:11,0:11:33.11:0,33,914	0/0:13,0:13:39.11:0,39,994	0/0:15,0:15:42.10:0,42,1137	0/0:8,0:8:19.10:0,19,272	1/1:1,0:1:2.98:21,3,0	0/1:28,1:23:1.71:2,0,261	0/0:3,0:3:9.03:0,9,246	0/0:8,0:8:21.07:0,21,608	0/0:14,0:14:42.14:0,42,1207	0/0:4,0:4:12.04:0,12,330	0/1:6,2:8:99:115,0,245	0/1:8,0:8:34.56:35,0,137	0/0:2,0:2:5.98:0,6,85
chr10	86670628	.	GCCCT	G	313.09	PASS	AB=0.880;AC=8;AF=0.190;AN=42;BaseQRankSum=3.794;DP=184;FS=4.987;HRun=0;HaplotypeScore=37.9632;InbreedingCoeff=-0.1452;MQ=55.75;MQ0=14;MQRankSum=-3.241;QD=4.29;ReadPosRankSum=-0.648;VQSLOD=0.5190;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:7:7.73:8,0,182	0/0:5,0:5:6.02:0,6,96	0/0:7,0:4:5.91:0,6,72	0/0:10,0:7:6.01:0,6,123	./.	./.	0/0:10,0:10:9.02:0,9,175	0/0:12,1:10:2.97:0,3,20	./.	0/0:6,1:6:9.02:0,9,159	./.	0/0:5,0:5:12.04:0,12,259	0/0:2,0:2:3.01:0,3,75	0/0:2,0:2:3.01:0,3,52	0/1:5,0:5:42.14:42,0,104	0/0:3,0:3:3.01:0,3,49	./.	0/1:6,0:8:45.13:45,0,47	0/0:16,0:10:9.02:0,9,190	0/1:5,3:8:44.94:45,0,59	0/1:30,1:24:42.14:42,0,103	./.	0/0:5,0:5:12.04:0,12,291	0/0:8,0:7:6.02:0,6,109	./.	0/1:5,3:8:99:192,0,128	1/1:3,1:3:4.57:55,5,0	0/0:3,1:2:3.01:0,3,74
chr10	86672264	.	GCCCT	G	30.90	PASS	AB=0.946;AC=5;AF=0.109;AN=46;BaseQRankSum=3.570;DP=185;FS=1.595;HRun=0;HaplotypeScore=40.6105;InbreedingCoeff=0.0035;MQ=62.53;MQ0=9;MQRankSum=-2.064;QD=0.64;ReadPosRankSum=0.434;VQSLOD=1.2930;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,1:10:34.46:34,0,295	0/0:2,0:2:6.02:0,6,153	0/0:26,0:19:34.90:0,35,620	0/0:26,0:15:16.12:0,16,492	./.	0/0:2,0:2:6.02:0,6,152	0/0:11,0:10:24.07:0,24,561	0/0:13,0:11:12.04:0,12,278	0/1:2,0:2:1.45:1,0,71	0/0:1,0:1:3.01:0,3,75	0/0:1,0:1:3.01:0,3,76	0/0:5,0:5:12.04:0,12,294	0/0:1,0:1:3.01:0,3,60	0/0:8,0:7:14.83:0,15,267	./.	0/0:4,0:4:9.03:0,9,168	0/0:3,0:3:6.02:0,6,128	0/0:2,0:2:6.02:0,6,152	./.	0/0:6,0:6:2.99:0,3,66	1/1:17,4:21:2.96:20,3,0	0/0:1,0:1:3.01:0,3,77	0/0:2,0:2:6.02:0,6,138	0/0:4,0:4:6.02:0,6,153	./.	0/1:8,1:7:71.42:71,0,96	./.	0/0:3,0:2:3.01:0,3,48
chr10	86672327	.	GCCCTGCCT	G	205.51	PASS	AB=0.908;AC=4;AF=0.077;AN=52;BaseQRankSum=4.244;DP=238;FS=0.000;HRun=0;HaplotypeScore=52.3063;InbreedingCoeff=0.1758;MQ=51.07;MQ0=9;MQRankSum=-4.493;QD=5.41;ReadPosRankSum=-1.836;VQSLOD=1.1656;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:11:30.10:0,30,1224	0/0:4,0:4:12.04:0,12,445	0/0:10,0:6:17.89:0,18,549	0/0:18,0:11:24.02:0,24,536	0/0:3,0:3:9.03:0,9,395	0/0:5,0:5:15.05:0,15,655	0/0:14,0:14:34.82:0,35,1556	0/0:13,1:11:9:0,9,262	0/0:10,0:10:30.10:0,30,1226	0/0:9,0:9:24.08:0,24,1005	0/0:4,0:4:12.04:0,12,518	0/0:4,0:4:9.03:0,9,391	0/0:1,0:1:3.01:0,3,127	0/0:4,0:4:12.04:0,12,513	0/0:2,0:2:6.02:0,6,259	0/0:1,0:1:3.01:0,3,127	0/0:14,0:14:42.14:0,42,1809	0/0:11,0:11:33.04:0,33,1215	1/1:16,2:9:6.01:112,6,0	0/1:8,1:9:19.43:19,0,37	0/0:28,0:23:3.04:0,3,83	0/0:2,0:2:3.01:0,3,132	0/0:4,0:4:9.03:0,9,366	0/0:20,0:19:37.62:0,38,2082	0/0:4,0:4:9.03:0,9,334	0/1:10,1:9:13.72:176,0,14	./.	./.
chr10	86672387	.	CCCTGCCTCCCTCACTCCACCACAGCCCTG	C	622.64	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=2.495;DP=352;FS=0.000;HRun=0;HaplotypeScore=225.0421;InbreedingCoeff=0.6893;MQ=75.48;MQ0=3;MQRankSum=-4.331;QD=12.45;ReadPosRankSum=-2.083;VQSLOD=2.3479;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:51.18:0,51,4037	0/0:1,0:1:2.97:0,3,20	0/0:33,0:24:65.61:0,66,2009	0/0:21,0:15:27.43:0,27,1043	0/0:8,0:8:18.06:0,18,1679	0/0:10,0:10:30.06:0,30,2034	0/0:28,0:27:72.05:0,72,4106	1/1:16,0:18:18.35:167,18,0	0/0:10,0:10:27.09:0,27,1717	0/0:9,0:9:27.08:0,27,1835	0/0:7,0:7:21.07:0,21,1175	0/0:18,0:18:54.09:0,54,4510	0/0:11,0:11:30.10:0,30,2659	0/0:11,0:10:30.10:0,30,2343	0/0:8,0:8:24.07:0,24,1947	0/0:7,0:7:21.07:0,21,1959	0/0:34,0:34:99:0,99,7259	0/0:21,0:21:60.12:0,60,4005	0/1:11,0:7:1.07:14,0,1	1/1:6,0:6:2.68:194,3,0	1/1:5,0:4:2.97:20,3,0	0/0:9,0:9:24.08:0,24,2409	0/0:3,0:3:9.01:0,9,694	0/0:26,0:25:72.09:0,72,4969	0/0:5,0:5:15.02:0,15,1104	1/1:3,0:3:0.47:1,0,0	1/1:2,5:6:6.02:363,6,0	0/0:2,0:2:3.01:0,3,58
chr10	86672393	.	CTCCCTCA	C	105.95	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=3.804;DP=349;FS=2.334;HRun=0;HaplotypeScore=84.7067;InbreedingCoeff=0.6737;MQ=72.62;MQ0=4;MQRankSum=-3.547;QD=6.23;ReadPosRankSum=0.470;VQSLOD=1.8590;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:57.20:0,57,2291	./.	0/0:33,0:24:60.05:0,60,1648	0/0:21,0:15:40.50:0,40,817	0/0:8,0:8:17.62:0,18,755	0/0:10,0:10:30.09:0,30,1027	0/0:30,0:29:87.30:0,87,3278	0/0:12,0:12:12.34:0,12,170	0/0:10,0:10:30.10:0,30,1229	0/0:9,0:9:27.09:0,27,995	0/0:7,0:7:21.07:0,21,831	0/0:19,0:19:57.19:0,57,2119	0/0:11,0:11:33.11:0,33,1371	0/0:11,0:10:30.10:0,30,1245	0/0:8,0:8:24.08:0,24,926	0/0:7,0:7:21.07:0,21,869	0/0:38,0:38:99:0,111,4389	0/0:22,0:22:66.23:0,66,2414	0/0:9,0:5:8.97:0,9,95	1/1:3,2:5:2.89:55,3,0	1/1:2,0:1:0.47:1,0,0	0/0:8,0:8:24.08:0,24,1007	0/0:2,0:2:6.02:0,6,251	0/0:28,0:27:78.27:0,78,3041	0/0:5,0:5:15.05:0,15,541	1/1:2,1:3:3.01:52,3,0	1/1:6,1:6:6.02:108,6,0	0/0:2,0:2:3.01:0,3,36
chr10	86672412	.	CCCTG	C	445.79	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=6.618;DP=372;FS=2.431;HRun=0;HaplotypeScore=74.5402;InbreedingCoeff=0.8568;MQ=66.00;MQ0=5;MQRankSum=-5.871;QD=14.38;ReadPosRankSum=-2.352;VQSLOD=2.3783;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:72.19:0,72,1756	./.	0/0:32,0:21:29.43:0,29,711	0/0:19,0:15:35.38:0,35,719	0/0:8,0:8:17.59:0,18,485	0/0:11,0:10:30.07:0,30,750	0/0:28,1:28:81.23:0,81,1920	1/1:4,4:8:3.01:57,3,0	0/0:12,0:12:27.09:0,27,728	0/0:9,0:9:24.08:0,24,571	0/0:6,0:6:15.05:0,15,405	0/0:23,0:22:65.95:0,66,1636	0/0:14,0:14:39.13:0,39,1039	0/0:10,1:10:24.08:0,24,620	0/0:7,0:7:20.81:0,21,498	0/0:10,0:10:30.09:0,30,727	0/0:45,0:45:99:0,126,3058	0/0:22,0:22:60.05:0,60,1480	./.	1/1:2,2:4:5.23:64,5,0	1/1:1,2:2:5.93:40,6,0	0/0:11,0:11:33.11:0,33,888	0/0:5,0:4:12.04:0,12,311	0/0:31,0:31:84.21:0,84,2083	0/0:6,0:6:18.06:0,18,486	1/1:3,2:5:8.98:132,9,0	1/1:6,2:8:9.03:163,9,0	1/1:1,2:3:9.03:145,9,0
chr10	86672485	.	TCTTCCTAGAGCTCC	T	4054.17	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=10.413;DP=486;FS=48.401;HRun=0;HaplotypeScore=194.5501;InbreedingCoeff=0.9874;MQ=90.61;MQ0=0;MQRankSum=-9.827;QD=71.13;ReadPosRankSum=-0.334;VQSLOD=1.6326;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,8062	0/0:9,0:9:27.09:0,27,1923	0/0:27,0:27:71.84:0,72,4087	0/0:22,0:22:57.19:0,57,3151	0/0:9,0:9:27.09:0,27,1863	0/0:12,0:12:36.12:0,36,2402	0/0:28,0:28:81.28:0,81,5327	1/1:7,8:14:23.87:303,24,0	0/0:27,0:27:78.27:0,78,5150	0/0:23,0:23:66.23:0,66,4583	0/0:9,0:9:27.08:0,27,1725	0/0:22,0:22:66.20:0,66,4112	0/0:18,0:18:54.17:0,54,3138	0/0:17,0:17:51.16:0,51,3348	0/0:12,0:12:36.12:0,36,2494	0/0:11,0:11:33.11:0,33,2338	0/0:44,0:44:99:0,129,8331	0/0:26,0:26:75.24:0,75,4737	1/1:2,9:10:24:603,24,0	1/1:2,9:11:24.08:1014,24,0	./.	0/0:16,0:16:45.15:0,45,3011	0/0:5,0:5:15.05:0,15,959	0/0:29,0:29:84.29:0,84,5114	0/0:19,0:19:57.18:0,57,3776	1/1:1,5:6:15.05:635,15,0	1/1:2,5:7:15.05:648,15,0	1/1:0,7:7:21.07:850,21,0
chr10	86673002	.	C	CCCTCCCTCTTCCTTCTTTCTTCCCTT	26726.25	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=14.672;DP=860;FS=0.649;HRun=0;HaplotypeScore=538.3500;InbreedingCoeff=0.8977;MQ=61.90;MQ0=3;MQRankSum=-16.554;QD=112.30;ReadPosRankSum=-2.407;VQSLOD=3.9399;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:67:99:0,186,9090	0/0:9,0:9:27.09:0,27,1646	0/0:28,0:20:51.13:0,51,1624	0/0:30,0:24:43.99:0,44,1625	0/0:30,0:30:87.11:0,87,4053	0/0:18,0:18:51.08:0,51,2630	0/0:36,0:36:84.55:0,85,4247	1/1:44,0:43:99:4744,120,0	0/0:37,0:37:99:0,99,5713	0/0:41,0:41:99:0,120,6106	0/0:40,0:40:99:0,117,5899	0/0:27,0:27:81.21:0,81,3673	0/0:27,0:27:67.83:0,68,3377	0/0:28,0:28:78.22:0,78,4592	0/0:35,0:35:99:0,102,5216	0/0:23,0:22:69.03:0,69,3477	0/0:36,0:36:99:0,102,5558	0/1:25,0:25:52.86:53,0,3570	1/1:31,0:31:84.24:4116,84,0	1/1:1,7:24:8.98:470,9,0	1/1:27,0:27:45.01:2071,45,0	0/0:31,0:31:78.23:0,78,3898	0/0:21,0:21:63.17:0,63,3642	0/0:30,0:30:84.29:0,84,4948	0/0:28,0:28:81.28:0,81,4468	1/1:46,0:46:99:9028,132,0	1/1:32,0:32:87.30:5163,87,0	1/1:9,0:9:24.04:1082,24,0
chr10	86673007	.	C	CCT	2240.96	PASS	AB=0.763;AC=6;AF=0.107;AN=56;BaseQRankSum=14.181;DP=848;FS=2.706;HRun=0;HaplotypeScore=149.7125;InbreedingCoeff=-0.1261;MQ=58.89;MQ0=3;MQRankSum=-12.936;QD=11.79;ReadPosRankSum=-0.684;VQSLOD=3.4056;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:66:99:0,184,2667	0/0:10,0:10:30.10:0,30,441	0/0:30,0:21:56.20:0,56,791	0/0:27,0:21:40.80:0,41,611	0/0:28,0:28:78.26:0,78,1149	0/0:20,0:20:54.17:0,54,777	0/0:34,0:34:93.77:0,94,1344	0/1:36,9:44:99:291,0,854	0/0:35,0:35:99:0,102,1494	0/0:42,0:42:99:0,114,1655	0/0:39,0:39:99:0,117,1720	0/0:28,0:28:75.24:0,75,1082	0/0:25,0:25:75.25:0,75,1104	0/0:27,0:27:78.26:0,78,1148	0/0:34,0:34:99:0,99,1458	0/0:25,0:24:72.24:0,72,1050	0/0:38,0:38:99:0,114,1651	0/0:25,0:25:72.24:0,72,1052	0/1:21,11:33:99:390,0,471	0/0:14,0:14:2.71:0,3,83	0/1:18,6:24:99:206,0,172	0/0:30,0:30:87.29:0,87,1277	0/0:24,0:24:66.06:0,66,971	0/0:30,0:30:84.28:0,84,1236	0/0:27,0:27:81.26:0,81,1173	0/1:29,16:45:99:831,0,813	0/1:23,12:35:99:465,0,637	0/1:5,2:8:22.73:182,0,23
chr10	86673012	.	C	CT	927.59	PASS	AB=0.845;AC=6;AF=0.107;AN=56;BaseQRankSum=13.007;DP=834;FS=0.000;HRun=0;HaplotypeScore=127.1212;InbreedingCoeff=-0.1214;MQ=58.47;MQ0=3;MQRankSum=-12.149;QD=5.24;ReadPosRankSum=-0.362;VQSLOD=3.3428;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:66,1:67:99:0,189,2592	0/0:12,0:12:33.09:0,33,429	0/0:32,0:22:62.90:0,63,789	0/0:27,0:21:28.95:0,29,621	0/0:27,0:27:81.24:0,81,1093	0/0:18,0:18:54.17:0,54,739	0/0:34,0:34:58.58:0,59,1263	0/1:40,2:48:88.20:88,0,947	0/0:37,0:37:99:0,108,1450	0/0:37,0:37:99:0,108,1505	0/0:39,0:39:99:0,117,1619	0/0:25,0:25:75.24:0,75,1029	0/0:27,0:27:78.25:0,78,1072	0/0:29,0:29:84.27:0,84,1154	0/0:38,0:38:99:0,114,1498	0/0:25,0:24:75.24:0,75,1032	0/0:38,0:38:99:0,114,1575	0/0:26,0:26:75.20:0,75,1003	0/1:20,4:33:99:214,0,510	0/0:10,0:10:11.98:0,12,119	0/1:11,4:17:80.85:81,0,250	0/0:28,0:28:81.25:0,81,1098	0/0:24,0:24:69.22:0,69,947	0/0:31,0:31:90.29:0,90,1231	0/0:26,0:26:78.25:0,78,1074	0/1:26,12:42:99:451,0,836	0/1:19,8:31:99:181,0,663	0/1:2,1:5:36.95:37,0,53
chr10	86673427	.	A	AGTCAATGTCG	12699.83	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.541;DP=737;FS=4.268;HRun=0;HaplotypeScore=231.1250;InbreedingCoeff=0.9938;MQ=68.59;MQ0=0;MQRankSum=-15.175;QD=111.40;ReadPosRankSum=-2.867;VQSLOD=4.3605;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,4568	0/0:9,0:9:24.07:0,24,722	0/0:24,0:23:54.17:0,54,1492	0/0:17,0:15:38.52:0,39,1092	0/0:30,0:30:87.30:0,87,2824	0/0:22,0:22:63.22:0,63,2072	0/0:33,0:33:93.31:0,93,2978	1/1:8,5:22:57.13:1983,57,0	0/0:38,0:38:99:0,108,3355	0/0:36,0:36:99:0,99,3000	0/0:24,0:24:63.22:0,63,2063	0/0:27,0:27:81.28:0,81,2639	0/0:35,0:35:99:0,105,3328	0/0:31,0:31:87.28:0,87,2726	0/0:42,0:42:99:0,120,3696	0/0:35,0:35:99:0,105,3290	0/0:30,0:30:84.23:0,84,2562	0/0:24,0:24:69.21:0,69,2190	1/1:5,6:18:45.11:2055,45,0	1/1:2,9:16:27.09:1409,27,0	1/1:4,11:17:36.59:1506,37,0	0/0:30,0:30:87.27:0,87,2741	0/0:29,0:29:87.23:0,87,2735	0/0:32,0:32:90.23:0,90,2668	0/0:26,0:26:78.23:0,78,2335	1/1:0,14:16:45.10:2241,45,0	1/1:4,15:20:60.14:2867,60,0	1/1:0,4:4:12.04:638,12,0
chr10	86673514	.	C	CG	2826.17	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.370;DP=667;FS=1.909;HRun=0;HaplotypeScore=102.8743;InbreedingCoeff=0.9669;MQ=84.60;MQ0=0;MQRankSum=-13.193;QD=27.71;ReadPosRankSum=-3.285;VQSLOD=2.6766;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1660	0/0:16,0:16:45.15:0,45,629	0/0:33,0:33:87.25:0,87,1151	0/0:37,0:36:63.35:0,63,966	0/0:33,0:33:96.32:0,96,1342	0/0:12,0:12:36.12:0,36,503	0/0:31,0:31:93.31:0,93,1293	1/1:0,13:13:35.92:369,36,0	0/0:34,0:34:99:0,99,1347	0/0:30,0:30:90.28:0,90,1206	0/0:17,0:17:48.13:0,48,651	0/0:27,0:27:81.27:0,81,1131	0/0:26,0:26:78.23:0,78,1055	0/0:38,0:38:99:0,114,1575	0/0:28,0:28:81.27:0,81,1132	0/0:28,0:28:81.25:0,81,1099	0/0:23,0:23:63.21:0,63,881	0/0:19,0:19:57.15:0,57,775	1/1:0,7:7:21.06:254,21,0	1/1:1,16:17:36.86:414,37,0	1/1:2,19:21:34.71:443,35,0	0/0:25,0:25:72.23:0,72,989	0/0:20,0:20:60.16:0,60,801	0/0:25,0:25:72.24:0,72,1007	0/0:23,0:23:69.23:0,69,964	1/1:2,20:22:60.07:701,60,0	1/1:0,21:21:63.20:799,63,0	1/1:0,1:1:3.01:39,3,0
chr10	86674014	.	T	TCAAG	9074.32	PASS	AB=0.929;AC=15;AF=0.268;AN=56;BaseQRankSum=7.307;DP=524;FS=4.652;HRun=0;HaplotypeScore=120.4666;InbreedingCoeff=0.8929;MQ=60.95;MQ0=0;MQRankSum=-15.352;QD=60.09;ReadPosRankSum=-2.820;VQSLOD=5.9637;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.22:0,72,1325	0/0:12,0:12:33.11:0,33,628	0/1:11,0:8:11.91:12,0,115	0/0:10,0:9:15.81:0,16,244	0/0:29,0:29:81.28:0,81,1539	0/0:26,0:26:69.24:0,69,1337	0/0:14,0:14:39.13:0,39,745	1/1:8,17:25:72.25:1856,72,0	0/0:14,0:14:39.13:0,39,755	0/0:25,0:25:69.24:0,69,1327	0/0:24,0:24:72.25:0,72,1394	0/0:18,0:18:51.17:0,51,973	0/0:5,0:5:15.05:0,15,291	0/0:13,0:13:39.10:0,39,687	0/0:14,0:14:39.12:0,39,708	0/0:14,0:14:39.12:0,39,722	0/0:33,0:33:96.33:0,96,1859	0/0:19,0:19:54.17:0,54,1011	1/1:7,11:18:48.16:1218,48,0	1/1:12,15:27:63.09:1534,63,0	1/1:3,5:8:12:265,12,0	0/0:16,0:16:48.15:0,48,882	0/0:26,0:26:72.25:0,72,1365	0/0:13,0:13:39.12:0,39,722	0/0:20,0:20:57.18:0,57,1071	1/1:7,23:30:84.29:2215,84,0	1/1:6,19:24:66.22:1729,66,0	1/1:2,3:5:9.03:246,9,0
chr10	86674029	.	TTTTTTAA	T	6658.54	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.697;DP=541;FS=0.833;HRun=0;HaplotypeScore=149.7244;InbreedingCoeff=0.9737;MQ=63.47;MQ0=2;MQRankSum=-11.342;QD=54.58;ReadPosRankSum=0.527;VQSLOD=4.5068;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.24:0,69,2471	0/0:9,0:9:27.08:0,27,849	0/0:24,0:13:34.37:0,34,946	0/0:21,0:10:21.49:0,21,496	0/0:27,0:27:81.28:0,81,2837	0/0:29,0:29:84.27:0,84,2993	0/0:14,0:14:42.14:0,42,1502	1/1:0,25:25:69.53:1527,70,0	0/0:16,0:16:42.14:0,42,1410	0/0:27,0:27:75.73:0,76,2399	0/0:28,0:28:84.29:0,84,3030	0/0:15,0:15:42.14:0,42,1580	0/0:9,0:9:27.08:0,27,787	0/0:11,0:11:30.10:0,30,1097	0/0:12,0:12:36.11:0,36,1187	0/0:16,0:16:48.16:0,48,1824	0/0:37,0:37:99:0,108,3961	0/0:19,0:19:57.20:0,57,2116	1/1:0,11:11:33.11:671,33,0	1/1:2,23:25:69.16:1179,69,0	1/1:1,8:9:6.02:111,6,0	0/0:19,0:19:57.20:0,57,1762	0/0:27,0:27:75.26:0,75,2494	0/0:13,0:13:39.13:0,39,1557	0/0:23,0:23:69.24:0,69,2381	1/1:0,24:24:69.24:1633,69,0	1/1:1,21:22:37.24:1245,37,0	1/1:0,6:6:12.04:293,12,0
chr10	86674563	.	AC	A	6870.08	PASS	AB=0.629;AC=11;AF=0.196;AN=56;BaseQRankSum=15.108;DP=1101;FS=0.602;HRun=1;HaplotypeScore=314.9169;InbreedingCoeff=0.6605;MQ=61.21;MQ0=4;MQRankSum=-8.822;QD=24.62;ReadPosRankSum=-4.035;VQSLOD=2.4905;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:70,0:68:99:0,104,1737	0/0:19,0:19:51.04:0,51,715	0/0:43,1:41:99:0,114,1684	0/0:43,0:41:99:0,110,1632	0/0:28,0:28:81.26:0,81,1243	0/0:32,0:32:84.26:0,84,1299	0/0:46,0:46:99:0,138,2093	1/1:4,25:28:40.31:875,40,0	0/0:51,0:51:99:0,149,2331	0/0:71,0:71:99:0,186,2664	0/0:39,0:39:64.18:0,64,1052	0/0:40,0:40:99:0,120,1816	0/0:39,0:39:99:0,117,1808	0/0:38,0:38:99:0,114,1778	0/0:42,0:42:99:0,126,1994	0/0:33,0:33:93.26:0,93,1415	0/0:33,0:33:81.79:0,82,1217	0/0:21,0:21:28.37:0,28,725	1/1:6,20:24:59.40:841,59,0	1/1:18,34:50:99:1315,100,0	1/1:10,39:46:94.61:1165,95,0	0/0:25,0:25:72.24:0,72,1140	0/0:28,0:28:84.26:0,84,1266	0/0:57,0:57:99:0,163,2526	0/0:23,0:23:66.22:0,66,1014	0/1:23,51:70:99:1895,0,248	0/1:16,23:39:68.52:638,0,69	0/1:5,5:10:57.99:140,0,58
chr10	86674585	.	A	ACC	4945.69	PASS	AB=0.898;AC=12;AF=0.214;AN=56;BaseQRankSum=9.903;DP=1162;FS=8.018;HRun=1;HaplotypeScore=445.9395;InbreedingCoeff=-0.2727;MQ=57.15;MQ0=5;MQRankSum=-12.322;QD=8.26;ReadPosRankSum=-1.328;VQSLOD=0.4213;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:66,0:65:99:159,0,967	0/1:21,0:21:71.95:72,0,534	0/0:46,0:41:82.90:0,83,1369	0/0:51,0:45:89.79:0,90,1329	0/0:23,0:23:69.20:0,69,1007	0/0:33,0:33:96.28:0,96,1402	0/0:46,0:46:99:0,132,1922	0/1:39,11:50:99:505,0,672	0/0:50,0:50:99:0,147,2099	0/1:83,0:83:99:365,0,2135	0/1:45,0:45:83.65:84,0,657	0/0:33,0:33:96.27:0,96,1383	0/0:37,0:37:99:0,111,1598	0/0:34,0:34:96.25:0,96,1358	0/0:38,0:38:99:0,111,1542	0/0:25,0:25:75.22:0,75,1103	0/1:40,0:40:99:129,0,697	0/0:22,0:22:31.52:0,32,548	0/1:38,5:41:99:544,0,504	0/1:33,16:49:99:739,0,885	0/1:52,10:60:99:269,0,497	0/0:27,0:27:75.21:0,75,1082	0/0:24,0:24:69.22:0,69,1033	0/0:52,0:52:99:0,147,2181	0/0:20,0:20:57.17:0,57,828	0/1:62,19:80:99:1013,0,1787	0/1:31,14:45:99:779,0,574	0/1:12,2:14:99:288,0,254
chr10	86674596	.	CACGT	C	10130.98	PASS	AB=0.760;AC=13;AF=0.232;AN=56;BaseQRankSum=17.080;DP=1193;FS=37.303;HRun=0;HaplotypeScore=465.9443;InbreedingCoeff=-0.3023;MQ=56.44;MQ0=7;MQRankSum=-15.394;QD=15.80;ReadPosRankSum=-1.488;VQSLOD=3.3765;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:50,17:67:99:614,0,907	0/1:13,9:22:99:588,0,461	0/0:52,0:43:99:0,107,2604	0/0:61,0:52:95.08:0,95,2707	0/0:24,0:24:69.22:0,69,1693	0/0:32,0:32:93.32:0,93,2492	0/0:45,0:45:99:0,132,3547	0/1:38,18:56:99:975,0,1325	0/0:48,0:48:99:0,127,3459	0/1:49,34:83:99:2260,0,2388	0/1:19,25:44:99:764,0,483	0/0:31,0:31:90.31:0,90,2315	0/0:32,0:32:96.33:0,96,2575	0/0:35,0:35:99:0,102,2497	0/0:37,0:37:96.77:0,97,2452	0/0:25,0:25:72.25:0,72,1850	0/1:33,6:39:99:219,0,1168	0/1:15,7:23:99:414,0,712	0/1:31,7:36:99:434,0,1007	0/1:33,20:53:99:747,0,1608	0/1:50,12:60:99:279,0,905	0/0:29,0:29:84.29:0,84,2163	0/0:21,0:21:54.18:0,54,1352	0/0:56,0:56:99:0,157,4068	0/0:23,0:23:60.21:0,60,1637	0/1:52,33:84:99:1876,0,2369	0/1:34,21:55:99:760,0,1404	0/1:10,4:14:99:202,0,391
chr10	86674615	.	ACAGT	A	6873.50	PASS	AB=0.785;AC=13;AF=0.232;AN=56;BaseQRankSum=19.919;DP=1208;FS=48.461;HRun=0;HaplotypeScore=465.2024;InbreedingCoeff=-0.3023;MQ=56.40;MQ0=9;MQRankSum=-17.506;QD=10.48;ReadPosRankSum=0.913;VQSLOD=2.9376;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:60,15:75:99:334,0,1643	0/1:10,7:17:99:345,0,406	0/0:50,0:40:98.83:0,99,2073	0/0:64,0:52:78.06:0,78,2310	0/0:24,0:24:66.23:0,66,1694	0/0:30,0:30:90.28:0,90,2283	0/0:45,0:45:99:0,126,3131	0/1:44,17:60:99:806,0,1561	0/0:48,0:48:99:0,129,3320	0/1:64,26:90:99:1503,0,2836	0/1:14,22:36:99:490,0,508	0/0:34,0:34:99:0,99,2532	0/0:32,0:32:93.32:0,93,2462	0/0:39,0:39:99:0,117,3011	0/0:34,0:34:99:0,100,2351	0/0:23,0:23:63.20:0,63,1581	0/1:37,5:42:99:138,0,1565	0/1:20,7:27:99:349,0,1248	0/1:30,5:30:99:201,0,942	0/1:42,15:57:99:529,0,2046	0/1:54,11:63:99:122,0,1628	0/0:37,0:37:99:0,105,2671	0/0:15,0:15:39.13:0,39,970	0/0:51,0:51:99:0,147,3674	0/0:25,0:25:69.24:0,69,1844	0/1:62,27:88:99:1307,0,2895	0/1:34,16:50:99:561,0,1509	0/1:8,4:12:99:190,0,555
chr10	86674635	.	T	TTA	6732.16	PASS	AB=0.772;AC=13;AF=0.232;AN=56;BaseQRankSum=20.206;DP=1108;FS=61.677;HRun=0;HaplotypeScore=366.3183;InbreedingCoeff=-0.3023;MQ=57.49;MQ0=1;MQRankSum=-17.725;QD=11.22;ReadPosRankSum=-3.967;VQSLOD=2.2145;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:46,19:66:99:369,0,1506	0/1:8,8:16:99:292,0,297	0/0:32,0:32:58.40:0,58,1021	0/0:54,0:45:99:0,101,1459	0/0:28,0:28:81.28:0,81,1317	0/0:25,0:25:72.23:0,72,1147	0/0:39,0:39:99:0,117,1881	0/1:39,13:51:99:693,0,922	0/0:48,0:48:99:0,141,2296	0/1:47,33:80:99:1738,0,1920	0/1:15,20:35:99:370,0,392	0/0:42,0:42:99:0,126,2018	0/0:34,0:34:99:0,99,1605	0/0:37,0:37:99:0,111,1786	0/0:34,0:34:99:0,102,1633	0/0:19,0:19:57.19:0,57,927	0/1:36,9:45:99:150,0,1238	0/1:23,4:28:99:137,0,998	0/1:23,8:29:99:398,0,700	0/1:35,15:50:99:435,0,1331	0/1:59,7:66:61.71:62,0,1257	0/0:38,0:38:99:0,114,1830	0/0:15,0:15:42.04:0,42,676	0/0:39,0:40:99:0,111,1751	0/0:21,0:21:63.22:0,63,1023	0/1:51,27:78:99:1401,0,1869	0/1:25,13:38:99:488,0,868	0/1:10,4:14:99:200,0,447
chr10	86674760	.	ATCT	A	5960.54	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.971;DP=682;FS=4.387;HRun=0;HaplotypeScore=107.1086;InbreedingCoeff=0.9990;MQ=88.68;MQ0=0;MQRankSum=-6.312;QD=40.83;ReadPosRankSum=-0.923;VQSLOD=5.9180;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,2656	0/0:12,0:12:36.12:0,36,817	0/0:30,0:30:84.29:0,84,1843	0/0:25,0:25:72.25:0,72,1609	0/0:39,0:39:99:0,114,2584	0/0:24,0:24:69.24:0,69,1564	0/0:21,0:21:60.21:0,60,1360	1/1:1,19:20:45.11:669,45,0	0/0:24,0:24:69.23:0,69,1563	0/0:39,0:39:99:0,108,2393	0/0:24,0:24:69.24:0,69,1561	0/0:21,0:21:57.20:0,57,1292	0/0:18,0:18:54.19:0,54,1189	0/0:26,0:26:78.27:0,78,1767	0/0:20,0:20:57.20:0,57,1292	0/0:12,0:12:33.10:0,33,706	0/0:35,0:35:99:0,105,2378	0/0:19,0:19:48.16:0,48,1088	1/1:0,10:10:21.07:350,21,0	1/1:0,26:26:78.27:1288,78,0	1/1:2,31:33:78.27:1268,78,0	0/0:25,0:25:72.25:0,72,1632	0/0:32,0:32:96.33:0,96,2176	0/0:22,0:21:60.21:0,60,1360	0/0:26,0:26:75.26:0,75,1701	1/1:2,19:21:51.17:848,51,0	1/1:2,25:27:66.23:1088,66,0	1/1:0,9:9:27.09:450,27,0
chr10	86674956	.	TGCTG	T	4744.29	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=3.728;DP=523;FS=4.855;HRun=0;HaplotypeScore=111.9220;InbreedingCoeff=0.9342;MQ=83.89;MQ0=1;MQRankSum=-2.314;QD=37.65;ReadPosRankSum=1.597;VQSLOD=5.0555;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:34:72.25:1367,72,0	1/1:0,10:9:27.09:512,27,0	0/0:15,0:15:45.15:0,45,1137	0/1:19,0:19:0.68:1,0,1159	0/0:14,0:14:36.11:0,36,911	0/0:18,0:18:54.19:0,54,1445	0/0:31,0:31:93.32:0,93,2462	0/0:23,0:22:66.23:0,66,1192	0/0:22,0:22:63.22:0,63,1689	1/1:0,23:22:63.15:1159,63,0	1/1:0,11:11:21.07:398,21,0	0/0:16,0:16:48.16:0,48,1262	0/0:10,0:10:27.09:0,27,727	0/0:18,0:18:54.19:0,54,1443	0/0:20,0:20:57.15:0,57,1432	0/0:16,0:16:48.16:0,48,1296	1/1:0,28:28:69.24:1308,69,0	0/0:28,0:28:81.26:0,81,2129	0/0:11,0:11:30.02:0,30,544	0/0:18,0:18:42.14:0,42,821	0/0:28,0:28:75.22:0,75,1419	0/0:13,0:13:33.11:0,33,891	0/0:9,0:9:21.07:0,21,553	0/0:21,0:21:63.22:0,63,1686	0/0:12,0:12:33.11:0,33,850	0/0:12,0:12:27.09:0,27,492	0/0:27,0:27:78.21:0,78,1483	0/0:15,0:15:39.13:0,39,737
chr10	86675100	.	GT	G	3453.25	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.895;DP=612;FS=13.749;HRun=6;HaplotypeScore=79.3481;InbreedingCoeff=0.9938;MQ=67.62;MQ0=3;MQRankSum=-8.431;QD=28.78;ReadPosRankSum=-2.496;VQSLOD=2.0558;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:93.29:0,93,1203	0/0:5,0:5:12.04:0,12,158	0/0:54,0:36:40.88:0,41,850	0/0:33,1:29:33.12:0,33,635	0/0:22,0:22:60.20:0,60,789	0/0:20,0:20:48.16:0,48,630	0/0:27,0:27:75.24:0,75,986	1/1:4,21:25:66.16:709,66,0	0/0:21,0:21:60.18:0,60,774	0/0:28,0:28:78.24:0,78,1008	0/0:23,0:23:63.20:0,63,826	0/0:16,0:16:48.15:0,48,616	0/0:8,0:8:24.08:0,24,316	0/0:21,0:21:60.20:0,60,789	0/0:15,0:15:45.15:0,45,592	0/0:15,0:15:42.14:0,42,553	0/0:23,0:23:60.18:0,60,774	0/0:27,0:27:72.19:0,72,925	1/1:4,8:12:33.08:348,33,0	1/1:2,13:14:42.11:448,42,0	1/1:2,12:14:33.08:350,33,0	0/0:25,0:25:69.21:0,69,894	0/0:20,0:20:57.16:0,57,722	0/0:29,0:28:81.26:0,81,1065	0/0:22,0:22:66.21:0,66,868	1/1:6,21:27:69.14:729,69,0	1/1:6,11:17:51.13:547,51,0	1/1:2,8:10:30.08:322,30,0
chr10	86675142	.	GT	G	4351.52	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.496;DP=515;FS=0.822;HRun=2;HaplotypeScore=76.5736;InbreedingCoeff=0.9959;MQ=66.17;MQ0=1;MQRankSum=-8.109;QD=34.26;ReadPosRankSum=-2.457;VQSLOD=4.1064;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.24:0,78,1144	0/0:8,0:8:24.08:0,24,360	0/0:16,0:12:35.98:0,36,448	0/0:18,0:15:29.74:0,30,388	0/0:15,0:15:45.13:0,45,635	0/0:13,0:13:39.13:0,39,578	0/0:22,0:22:66.21:0,66,970	1/1:2,37:38:99:1331,105,0	0/0:16,0:16:48.15:0,48,700	0/0:18,0:18:48.15:0,48,687	0/0:11,0:11:27.09:0,27,404	0/0:17,0:17:51.17:0,51,765	0/0:10,0:10:30.10:0,30,446	0/0:21,0:21:63.20:0,63,925	0/0:21,0:21:60.19:0,60,879	0/0:9,0:9:27.09:0,27,405	0/0:35,0:35:99:0,102,1501	0/0:24,0:24:72.21:0,72,1037	1/1:0,12:12:36.12:467,36,0	1/1:1,11:12:27.09:350,27,0	1/1:2,18:20:47.76:622,48,0	0/0:22,0:22:66.20:0,66,952	0/0:13,0:13:33.11:0,33,495	0/0:34,0:34:99:0,99,1483	0/0:18,0:18:54.15:0,54,768	1/1:1,18:19:54.17:687,54,0	1/1:0,20:20:54.16:700,54,0	1/1:0,5:5:15.05:195,15,0
chr10	86675407	.	G	GCACCAGGC	9955.93	PASS	AB=0.595;AC=13;AF=0.232;AN=56;BaseQRankSum=11.943;DP=619;FS=18.851;HRun=0;HaplotypeScore=173.0519;InbreedingCoeff=0.8781;MQ=79.03;MQ0=0;MQRankSum=-13.872;QD=90.51;ReadPosRankSum=-3.394;VQSLOD=3.0175;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,3400	0/0:5,0:5:12.04:0,12,344	0/0:15,0:16:37.58:0,38,730	0/0:21,0:21:52.97:0,53,1182	0/0:17,0:17:51.04:0,51,1343	0/0:18,0:18:54.19:0,54,1463	0/0:29,0:29:80.96:0,81,2029	1/1:13,4:18:54.13:1847,54,0	0/0:29,0:29:87.30:0,87,2474	0/0:20,0:20:57.19:0,57,1440	0/0:13,0:13:36.12:0,36,978	0/0:19,0:19:54.19:0,54,1525	0/0:15,0:15:45.11:0,45,1216	0/0:25,0:25:75.26:0,75,2107	0/0:21,0:21:63.17:0,63,1582	0/0:23,0:23:69.22:0,69,1919	0/0:53,0:53:99:0,153,3997	0/0:38,0:38:99:0,111,3104	1/1:6,8:14:33.11:1293,33,0	1/1:2,4:7:9.03:393,9,0	1/1:11,9:23:45.14:1881,45,0	0/0:21,0:21:60.19:0,60,1632	0/0:17,0:17:39.59:0,40,1018	0/0:42,0:42:99:0,123,3383	0/0:19,0:19:57.20:0,57,1586	0/1:8,15:25:16.89:2634,0,17	1/1:10,6:17:39.13:1573,39,0	1/1:4,1:5:12:336,12,0
chr10	86675660	.	CCGGTTTCAGAGGCGGT	C	5097.30	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.884;DP=476;FS=0.568;HRun=0;HaplotypeScore=221.3928;InbreedingCoeff=0.9462;MQ=88.59;MQ0=0;MQRankSum=-8.103;QD=60.68;ReadPosRankSum=0.888;VQSLOD=4.3892;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.29:0,84,5628	0/0:3,0:3:5.85:0,6,373	0/0:20,0:20:54.18:0,54,2684	0/0:19,0:19:48.16:0,48,2651	0/0:10,0:10:25.64:0,26,1461	0/0:15,0:15:45.15:0,45,3117	0/0:25,0:25:75.26:0,75,5482	1/1:10,17:27:51.17:1237,51,0	0/0:23,0:23:69.24:0,69,4973	0/0:20,0:20:60.21:0,60,3841	0/0:6,0:6:15.05:0,15,831	0/0:17,0:17:51.18:0,51,3794	0/0:16,0:16:48.16:0,48,3532	0/0:23,0:23:69.24:0,69,4964	0/0:20,0:20:60.16:0,60,4075	0/0:11,0:11:33.11:0,33,2467	0/0:38,0:38:99:0,114,8599	0/0:17,0:17:48.16:0,48,3272	1/1:7,9:16:27.07:978,27,0	1/1:1,4:5:9.03:431,9,0	1/1:5,10:15:14.55:592,15,0	0/0:9,0:9:24.08:0,24,1479	0/0:14,0:14:42.14:0,42,2427	0/0:41,0:41:99:0,123,9242	0/0:16,0:16:45.15:0,45,2887	1/1:4,5:9:15.05:710,15,0	1/1:0,8:8:15.05:718,15,0	1/1:0,4:4:9.03:431,9,0
chr10	86675902	.	TTTCC	T	2461.18	PASS	AB=0.514;AC=11;AF=0.204;AN=54;BaseQRankSum=7.206;DP=429;FS=0.601;HRun=0;HaplotypeScore=74.2623;InbreedingCoeff=0.8429;MQ=75.00;MQ0=6;MQRankSum=-4.894;QD=27.65;ReadPosRankSum=-0.071;VQSLOD=2.7666;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:63.15:0,63,1716	0/0:4,0:4:12.04:0,12,336	0/0:25,0:17:48.16:0,48,1290	0/0:30,0:20:51.11:0,51,1291	0/0:14,0:14:33.10:0,33,864	0/0:22,0:22:66.22:0,66,1773	0/0:26,0:26:78.13:0,78,2040	1/1:2,15:16:45.15:844,45,0	0/0:16,0:16:44.94:0,45,1246	0/0:14,0:14:38.40:0,38,1045	0/0:11,0:10:24.08:0,24,640	0/0:12,0:12:36.12:0,36,996	0/0:7,0:7:21.07:0,21,572	0/0:15,0:15:42.14:0,42,1115	0/0:17,0:17:46.97:0,47,1189	0/0:16,0:16:45.15:0,45,1251	0/0:25,0:23:63.19:0,63,1697	0/0:12,0:12:33.06:0,33,790	1/1:3,7:10:21.07:419,21,0	1/1:0,12:12:11.99:199,12,0	0/1:2,34:36:22.77:680,0,23	0/0:8,0:8:24.08:0,24,670	0/0:8,0:8:24.05:0,24,567	0/0:20,0:20:54.14:0,54,1437	0/0:9,0:9:21.06:0,21,529	1/1:0,8:8:21.07:410,21,0	1/1:0,6:6:5.98:78,6,0	./.
chr10	86675908	.	GGTGT	G	159.19	PASS	AB=1.000;AC=5;AF=0.132;AN=38;BaseQRankSum=3.055;DP=441;FS=28.237;HRun=0;HaplotypeScore=83.9204;InbreedingCoeff=0.4355;MQ=64.57;MQ0=15;MQRankSum=-0.923;QD=2.57;ReadPosRankSum=0.351;VQSLOD=-0.3860;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:3.01:0,3,67	0/0:4,0:4:3.01:0,3,62	./.	./.	0/0:12,0:12:3.01:0,3,49	0/0:24,0:24:12.02:0,12,198	0/0:30,0:30:9.96:0,10,144	./.	0/0:18,0:16:5.72:0,6,41	./.	0/0:9,0:9:8.77:0,9,130	0/0:10,0:10:11.98:0,12,139	0/0:8,0:8:8.96:0,9,68	0/0:14,0:14:9.03:0,9,198	1/1:11,6:17:15.05:228,15,0	0/0:17,0:16:6.01:0,6,84	0/0:27,0:25:23.89:0,24,313	0/0:13,0:13:5.20:0,5,63	./.	./.	0/1:40,0:38:0.04:0,0,0	0/0:11,0:11:12.02:0,12,221	0/0:9,0:8:3:0,3,25	0/0:19,0:20:20.78:0,21,351	./.	./.	1/1:4,0:5:3:28,3,0	./.
chr10	86676058	.	T	TGAATGG	7867.08	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-0.228;DP=575;FS=42.832;HRun=0;HaplotypeScore=120.0145;InbreedingCoeff=0.9421;MQ=79.54;MQ0=0;MQRankSum=-11.275;QD=77.89;ReadPosRankSum=-2.458;VQSLOD=3.1536;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,2916	0/0:4,0:4:12.04:0,12,307	0/0:17,0:17:48.14:0,48,1127	0/0:15,0:15:42.14:0,42,1029	0/0:16,0:16:48.16:0,48,1180	0/0:21,0:21:63.22:0,63,1614	0/0:28,0:28:84.22:0,84,1908	1/1:1,8:18:48.16:1628,48,0	0/0:16,0:16:45.15:0,45,1153	0/0:27,0:27:81.20:0,81,1943	0/0:13,0:13:39.13:0,39,999	0/0:11,0:11:33.11:0,33,845	0/0:19,0:19:57.18:0,57,1408	0/0:18,0:18:51.18:0,51,1278	0/0:29,0:29:87.29:0,87,2120	0/0:29,0:29:78.27:0,78,1998	0/0:37,0:37:99:0,108,2572	0/0:23,0:23:66.19:0,66,1634	1/1:0,6:11:30.07:820,30,0	1/1:0,17:19:48.11:1684,48,0	1/1:0,0:3:3.01:69,3,0	0/0:23,0:23:69.21:0,69,1664	0/0:20,0:20:60.19:0,60,1458	0/0:45,0:45:99:0,129,3178	0/0:20,0:20:57.18:0,57,1379	1/1:1,13:21:45.15:1491,45,0	1/1:0,23:26:54.18:1950,54,0	1/1:0,2:2:6.02:225,6,0
chr10	86676819	.	A	AAGG	10672.74	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.078;DP=661;FS=2.849;HRun=0;HaplotypeScore=100.8919;InbreedingCoeff=0.9996;MQ=80.92;MQ0=0;MQRankSum=-7.400;QD=59.29;ReadPosRankSum=-1.953;VQSLOD=5.8615;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1756	0/0:8,0:8:24.08:0,24,406	0/0:26,0:26:66.16:0,66,1035	0/0:22,0:22:60.15:0,60,925	0/0:27,0:27:78.27:0,78,1330	0/0:25,0:25:75.26:0,75,1275	0/0:26,0:26:75.26:0,75,1279	1/1:11,22:34:90.28:1942,90,0	0/0:28,0:28:81.26:0,81,1355	0/0:30,0:30:84.29:0,84,1431	0/0:17,0:17:51.17:0,51,869	0/0:23,0:23:60.19:0,60,993	0/0:22,0:22:66.23:0,66,1126	0/0:19,0:19:51.17:0,51,870	0/0:31,0:31:90.28:0,90,1479	0/0:16,0:16:48.16:0,48,819	0/0:24,0:24:72.22:0,72,1171	0/0:17,0:17:51.16:0,51,842	1/1:3,17:20:57.15:1192,57,0	1/1:2,23:25:69.24:1588,69,0	1/1:5,28:35:84.29:1907,84,0	0/0:24,0:24:72.25:0,72,1228	0/0:17,0:17:51.17:0,51,866	0/0:21,0:21:60.21:0,60,1023	0/0:22,0:22:66.23:0,66,1120	1/1:4,22:25:66.23:1517,66,0	1/1:1,25:26:72.25:1628,72,0	1/1:1,13:14:39.13:899,39,0
chr10	86677055	.	TC	T	1566.67	PASS	AB=0.844;AC=12;AF=0.214;AN=56;BaseQRankSum=8.537;DP=602;FS=17.040;HRun=2;HaplotypeScore=89.6714;InbreedingCoeff=0.7169;MQ=63.15;MQ0=18;MQRankSum=-8.495;QD=13.17;ReadPosRankSum=-0.823;VQSLOD=1.3004;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:62.99:0,63,831	0/0:9,0:9:19.13:0,19,258	0/0:61,0:15:32.53:0,33,426	0/0:69,0:30:38.36:0,38,667	0/0:15,0:15:42.14:0,42,604	0/0:17,0:17:48.13:0,48,648	0/0:21,0:21:54.18:0,54,767	0/1:27,12:32:59.99:639,0,60	0/0:16,0:16:48.15:0,48,678	0/0:21,0:21:57.08:0,57,818	0/0:16,0:16:30.10:0,30,437	0/0:26,0:26:75.15:0,75,1053	0/0:25,0:25:72.60:0,73,1006	0/0:14,0:14:37.66:0,38,498	0/0:23,0:23:66.01:0,66,977	0/0:22,0:22:66.01:0,66,921	0/0:28,0:28:70.79:0,71,990	0/0:17,0:17:46.97:0,47,669	0/1:11,1:11:32.17:252,0,32	1/1:12,0:11:5.98:59,6,0	1/1:4,3:7:3.01:38,3,0	0/0:19,0:19:57.19:0,57,834	0/0:8,0:8:21.07:0,21,310	0/0:19,0:19:54.16:0,54,754	0/0:12,0:12:36.10:0,36,507	1/1:23,1:23:55.74:462,56,0	1/1:15,1:12:18.09:127,18,0	1/1:7,2:8:20.51:158,21,0
chr10	86677056	.	C	CT	2656.85	PASS	AB=0.639;AC=12;AF=0.214;AN=56;BaseQRankSum=8.424;DP=606;FS=17.737;HRun=1;HaplotypeScore=88.3083;InbreedingCoeff=0.7192;MQ=61.26;MQ0=20;MQRankSum=-8.429;QD=21.60;ReadPosRankSum=-1.266;VQSLOD=2.2844;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:62.99:0,63,786	0/0:9,0:9:18.71:0,19,249	0/0:59,0:15:32.53:0,33,422	0/0:69,0:28:34.83:0,35,626	0/0:15,0:15:42.14:0,42,574	0/0:17,0:17:48.13:0,48,624	0/0:22,0:22:53.81:0,54,733	0/1:23,12:34:25.91:956,0,26	0/0:16,0:16:48.15:0,48,641	0/0:21,0:21:51.42:0,51,691	0/0:17,0:17:30.08:0,30,413	0/0:26,0:26:75.21:0,75,1001	0/0:24,0:25:75.13:0,75,982	0/0:13,0:13:39.04:0,39,490	0/0:23,0:23:69.02:0,69,928	0/0:22,0:22:66.01:0,66,878	0/0:28,0:28:72.17:0,72,957	0/0:17,0:17:48.11:0,48,644	0/1:3,9:11:22.39:336,0,22	1/1:0,13:12:6.02:86,6,0	1/1:4,2:7:3.01:38,3,0	0/0:19,0:19:57.19:0,57,788	0/0:9,0:9:21.07:0,21,292	0/0:19,0:19:54.16:0,54,719	0/0:12,0:12:36.10:0,36,481	1/1:1,21:22:57.19:816,57,0	1/1:3,15:14:21.50:279,21,0	1/1:2,7:8:21.07:316,21,0
chr10	86677058	.	T	TCTC	1432.17	PASS	AB=0.820;AC=5;AF=0.089;AN=56;BaseQRankSum=6.327;DP=614;FS=17.440;HRun=0;HaplotypeScore=111.7562;InbreedingCoeff=-0.1110;MQ=60.64;MQ0=24;MQRankSum=-7.184;QD=13.90;ReadPosRankSum=0.876;VQSLOD=2.2368;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:49.06:0,49,821	0/0:9,0:9:13.97:0,14,242	0/0:58,0:14:24.03:0,24,298	0/0:72,0:28:44.46:0,44,628	0/0:15,0:15:42.14:0,42,633	0/0:18,0:18:48.14:0,48,743	0/0:22,0:22:53.31:0,53,814	0/1:35,6:35:99:623,0,386	0/0:16,0:16:45.13:0,45,697	0/0:21,0:21:57:0,57,765	0/0:17,0:17:27.09:0,27,446	0/0:26,0:26:72.24:0,72,1123	0/0:25,0:25:66.20:0,66,1046	0/0:12,0:12:36.12:0,36,540	0/0:23,0:23:69.21:0,69,1098	0/0:22,0:22:62.88:0,63,966	0/0:28,0:28:69.16:0,69,1031	0/0:18,0:18:48.14:0,48,750	0/1:11,2:12:85.52:235,0,86	0/0:9,3:11:5.59:0,6,38	0/0:6,1:7:3.01:0,3,34	0/0:21,0:21:57.67:0,58,933	0/0:9,0:9:21.07:0,21,350	0/0:20,0:20:54.17:0,54,809	0/0:11,0:11:30.10:0,30,497	0/1:16,5:20:99:327,0,220	0/1:12,6:14:55.45:259,0,55	0/1:7,2:8:99:106,0,126
chr10	86677085	.	T	TACAC	1491.87	PASS	AB=0.881;AC=12;AF=0.231;AN=52;BaseQRankSum=-2.056;DP=551;FS=4.332;HRun=0;HaplotypeScore=105.5389;InbreedingCoeff=0.6316;MQ=54.25;MQ0=25;MQRankSum=1.492;QD=9.95;ReadPosRankSum=0.000;VQSLOD=2.8856;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:23,10:35:9.02:214,9,0	1/1:4,5:10:3.01:71,3,0	./.	./.	0/0:14,0:14:20.90:0,21,326	0/0:23,0:23:4.89:0,5,605	0/0:18,0:21:23.84:0,24,334	0/0:22,0:22:11.98:0,12,132	0/0:16,0:16:30.09:0,30,437	1/1:11,7:22:29.91:362,30,0	0/1:10,5:16:22.04:65,0,22	0/0:23,0:22:18.04:0,18,232	0/0:23,0:23:23.50:0,24,465	0/0:10,0:13:30.08:0,30,409	0/0:20,0:23:39.10:0,39,546	0/0:23,0:23:33.10:0,33,485	1/1:14,11:31:29.49:538,29,0	1/1:21,0:22:24.94:391,25,0	0/0:12,0:9:6.02:0,6,94	0/0:7,0:7:6.01:0,6,72	0/1:12,0:12:15.37:15,0,199	0/0:22,0:24:32.76:0,33,448	0/0:12,0:14:11.86:0,12,169	0/0:24,0:23:36.11:0,36,544	0/0:11,0:14:8.61:0,9,232	0/0:17,0:18:8.51:0,9,249	0/0:13,0:15:27.03:0,27,343	0/0:9,0:8:11.93:0,12,159
chr10	86677308	.	TCTTTC	T	5052.45	PASS	AB=0.571;AC=13;AF=0.232;AN=56;BaseQRankSum=14.615;DP=692;FS=21.547;HRun=0;HaplotypeScore=158.9099;InbreedingCoeff=0.8629;MQ=70.61;MQ0=2;MQRankSum=-12.186;QD=41.41;ReadPosRankSum=-2.784;VQSLOD=2.6235;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,3395	0/0:2,0:2:6.01:0,6,104	0/0:55,0:31:58.61:0,59,1371	0/0:61,0:33:77.28:0,77,1710	0/0:35,0:35:99:0,105,3087	0/0:16,0:16:45.11:0,45,1269	0/0:26,0:26:78.19:0,78,2158	1/1:6,31:37:84.01:1382,84,0	0/0:25,0:25:75.26:0,75,2282	0/0:26,0:26:75.24:0,75,2058	0/0:27,0:27:78.24:0,78,2206	0/0:16,0:16:45.15:0,45,1394	0/0:17,0:17:51.16:0,51,1434	0/0:30,0:30:87.24:0,87,2447	0/0:29,0:29:84.29:0,84,2483	0/0:26,0:26:78.21:0,78,2127	0/0:22,0:22:66.23:0,66,1970	0/0:24,0:24:69.18:0,69,1862	1/1:3,15:18:44.62:721,45,0	1/1:1,29:30:60.21:1225,60,0	1/1:0,7:7:12.04:223,12,0	0/0:27,0:27:75.24:0,75,2052	0/0:19,0:19:56.91:0,57,1576	0/0:21,0:21:60.17:0,60,1721	0/0:26,0:26:72.23:0,72,2099	0/1:4,12:16:50.93:720,0,51	1/1:2,9:11:33.02:594,33,0	1/1:1,2:3:9.03:188,9,0
chr10	86677360	.	TTGTTTGACTCTCTGCAC	T	4752.91	PASS	AC=8;AF=0.160;AN=50;BaseQRankSum=10.440;DP=571;FS=0.000;HRun=0;HaplotypeScore=269.5818;InbreedingCoeff=0.9903;MQ=76.25;MQ0=0;MQRankSum=-8.336;QD=91.40;ReadPosRankSum=0.458;VQSLOD=4.0711;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,9638	0/0:4,0:4:12.04:0,12,999	0/0:13,0:13:32.89:0,33,2365	0/0:15,0:15:42.09:0,42,2408	0/0:31,0:31:90.31:0,90,6327	0/0:17,0:17:48.15:0,48,3753	0/0:28,0:28:84.29:0,84,6320	1/1:0,11:11:29.96:553,30,0	0/0:27,0:27:78.26:0,78,6092	0/0:30,0:30:90.30:0,90,6880	0/0:19,0:19:45.14:0,45,3278	0/0:16,0:16:45.15:0,45,3548	0/0:23,0:23:66.23:0,66,5388	0/0:28,0:28:78.27:0,78,6363	0/0:22,0:22:63.20:0,63,4601	0/0:34,0:34:99:0,102,7763	0/0:35,0:35:99:0,105,8171	0/0:22,0:22:60.21:0,60,4731	./.	1/1:4,8:12:24.08:1181,24,0	./.	0/0:23,0:23:66.20:0,66,4669	0/0:26,0:26:69.24:0,69,5030	0/0:35,0:35:99:0,99,7420	0/0:16,0:16:42.14:0,42,3202	1/1:3,14:17:36.03:1396,36,0	1/1:0,12:12:32.27:1623,32,0	./.
chr10	86677493	.	T	TG	1281.45	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.378;DP=550;FS=36.939;HRun=0;HaplotypeScore=77.5981;InbreedingCoeff=0.9582;MQ=74.55;MQ0=0;MQRankSum=-11.133;QD=22.48;ReadPosRankSum=-3.179;VQSLOD=1.3097;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:99:0,126,1736	0/0:6,0:6:18.06:0,18,252	0/0:16,0:15:38.82:0,39,492	0/0:13,0:14:37.72:0,38,452	0/0:18,0:17:51.15:0,51,694	0/0:23,0:23:69.23:0,69,965	0/0:30,0:30:86.32:0,86,1178	1/1:2,10:12:33.03:346,33,0	0/0:31,0:31:90.11:0,90,1259	0/0:15,0:15:45.15:0,45,629	0/0:14,0:14:36.08:0,36,481	0/0:23,0:23:69.23:0,69,965	0/0:23,0:23:66.22:0,66,912	0/0:26,0:26:69.23:0,69,960	0/0:21,0:21:63.19:0,63,861	0/0:27,0:27:81.27:0,81,1132	0/0:42,0:42:99:0,126,1762	0/0:18,0:18:51.17:0,51,713	1/1:1,4:5:12.03:146,12,0	1/1:1,11:12:25.29:244,25,0	0/0:0,9:9:2.81:0,3,8	0/0:21,0:21:60.17:0,60,819	0/0:18,0:18:51.15:0,51,690	0/0:29,0:29:87.29:0,87,1212	0/0:25,0:25:75.25:0,75,1048	1/1:0,10:10:30.04:284,30,0	1/1:1,6:7:18.02:180,18,0	1/1:0,11:11:32.29:267,32,0
chr10	86677494	.	C	CATG	2622.59	PASS	AB=0.571;AC=13;AF=0.232;AN=56;BaseQRankSum=12.251;DP=559;FS=40.833;HRun=0;HaplotypeScore=100.2796;InbreedingCoeff=0.9587;MQ=74.83;MQ0=0;MQRankSum=-11.498;QD=35.93;ReadPosRankSum=-4.196;VQSLOD=1.5707;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:99:0,126,2188	0/0:6,0:6:18.06:0,18,327	0/0:17,0:16:40.52:0,41,495	0/0:14,0:14:31.97:0,32,480	0/0:17,0:16:48.16:0,48,879	0/0:23,0:23:69.24:0,69,1279	0/0:29,0:30:66.81:0,67,1490	1/1:8,8:16:45.01:688,45,0	0/0:31,0:31:90.12:0,90,1671	0/0:15,0:15:45.15:0,45,839	0/0:15,0:15:36.11:0,36,632	0/0:23,0:23:69.22:0,69,1249	0/0:23,0:23:69.20:0,69,1180	0/0:26,0:26:78.22:0,78,1349	0/0:20,0:20:60.18:0,60,1051	0/0:27,0:27:81.28:0,81,1494	0/0:44,0:44:99:0,126,2331	0/0:18,0:18:51.17:0,51,942	1/1:5,3:8:17.99:234,18,0	1/1:1,10:12:27.09:452,27,0	0/1:2,6:8:0.30:1,0,0	0/0:20,0:20:60.15:0,60,1080	0/0:19,0:19:51.08:0,51,867	0/0:29,0:29:87.28:0,87,1565	0/0:25,0:25:75.26:0,75,1384	1/1:0,10:10:30.10:541,30,0	1/1:1,6:7:18.03:285,18,0	1/1:1,11:12:36.12:608,36,0
chr10	86677574	.	T	TAA	2600.54	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=5.415;DP=533;FS=3.611;HRun=10;HaplotypeScore=100.1069;InbreedingCoeff=0.9580;MQ=69.85;MQ0=0;MQRankSum=-6.870;QD=19.85;ReadPosRankSum=-4.155;VQSLOD=2.1384;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:74.99:0,75,741	0/0:5,0:5:12.02:0,12,122	0/0:13,0:13:26.99:0,27,263	0/0:11,0:12:24.29:0,24,236	0/0:19,0:19:32.88:0,33,312	0/0:16,0:17:32.73:0,33,317	0/0:18,0:19:47.80:0,48,462	1/1:14,11:27:35.43:417,35,0	0/0:14,0:14:30:0,30,297	0/0:28,0:28:47.96:0,48,482	0/0:20,0:21:11.30:0,11,292	0/0:17,0:19:47.54:0,48,451	0/0:22,0:22:41.94:0,42,409	0/0:22,0:23:35.60:0,36,523	0/0:13,0:14:26.72:0,27,256	0/0:19,0:19:48.10:0,48,488	0/0:25,0:25:69.11:0,69,694	0/0:23,0:26:62.27:0,62,584	1/1:4,6:11:21.06:281,21,0	1/1:7,8:15:15.05:213,15,0	1/1:1,8:11:17.55:232,18,0	0/0:19,0:19:4.96:0,5,240	0/0:16,0:16:32.99:0,33,329	0/0:19,0:19:45.04:0,45,458	0/0:19,0:19:29.98:0,30,303	1/1:7,27:39:44.68:963,45,0	1/1:1,11:12:26.94:402,27,0	1/1:7,9:16:21.03:288,21,0
chr10	86678488	.	A	AGG	6490.08	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-0.416;DP=407;FS=3.627;HRun=5;HaplotypeScore=60.8952;InbreedingCoeff=0.9765;MQ=69.74;MQ0=1;MQRankSum=-1.997;QD=31.35;ReadPosRankSum=-1.956;VQSLOD=4.0200;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:20:32.44:115,32,0	1/1:0,0:3:7.49:27,7,0	0/0:15,0:13:35.57:0,36,384	0/0:18,0:15:10.07:0,10,279	0/0:8,0:8:21.07:0,21,267	0/0:9,0:9:27.09:0,27,344	0/0:17,0:17:45.14:0,45,573	1/1:2,19:23:57.18:964,57,0	0/0:16,0:16:39.11:0,39,497	1/1:0,0:6:15.15:55,15,0	1/1:0,0:10:21.78:76,22,0	0/0:13,0:13:39.12:0,39,497	0/0:11,0:11:30.10:0,30,381	0/0:8,0:8:24.08:0,24,306	0/0:19,0:19:57.17:0,57,713	0/0:7,0:7:21.07:0,21,267	1/1:0,0:18:34.93:125,35,0	1/1:0,0:9:19.96:71,20,0	1/1:0,16:16:48.16:833,48,0	1/1:0,20:21:57.15:963,57,0	1/1:5,31:35:90.31:1533,90,0	0/0:13,0:13:36.11:0,36,457	0/0:15,0:14:42.01:0,42,534	0/0:16,0:16:39.12:0,39,497	0/0:15,0:15:45.14:0,45,573	1/1:3,17:21:56.64:888,57,0	1/1:3,13:15:30.10:525,30,0	1/1:2,6:8:18.06:315,18,0
chr10	86679390	.	CGA	C	1888.22	PASS	AB=1.000;AC=12;AF=0.231;AN=52;BaseQRankSum=7.200;DP=458;FS=0.554;HRun=0;HaplotypeScore=72.8653;InbreedingCoeff=0.7970;MQ=77.22;MQ0=20;MQRankSum=3.533;QD=17.98;ReadPosRankSum=-2.108;VQSLOD=2.9659;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:3.93:0,4,26	0/1:5,0:4:0.05:0,0,0	0/0:39,0:17:42.53:0,43,666	0/0:42,0:24:29.12:0,29,471	0/0:12,0:11:23.99:0,24,349	0/0:14,0:13:36.12:0,36,611	0/0:16,0:16:46.69:0,47,745	1/1:0,21:21:63.14:879,63,0	0/0:13,0:12:35.95:0,36,572	0/0:14,0:14:3.54:0,4,33	0/1:14,0:13:0:0,0,0	0/0:2,0:2:6.02:0,6,116	0/0:11,0:10:30.10:0,30,517	0/0:13,0:13:28.96:0,29,565	0/0:8,0:8:24.08:0,24,433	0/0:16,0:16:45.15:0,45,770	0/0:14,0:14:5.26:0,5,43	0/0:20,0:20:57.18:0,57,852	1/1:1,5:5:15.05:211,15,0	./.	./.	0/0:24,0:21:48.14:0,48,780	0/0:24,0:23:60.90:0,61,1051	0/0:18,0:18:48.16:0,48,794	0/0:19,0:19:42.12:0,42,643	1/1:0,18:18:54.17:705,54,0	1/1:0,19:19:17.94:192,18,0	1/1:2,20:20:5.91:59,6,0
chr10	86680890	.	T	TC	5597.92	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-9.176;DP=518;FS=3.456;HRun=5;HaplotypeScore=57.9754;InbreedingCoeff=0.9590;MQ=59.54;MQ0=4;MQRankSum=-1.564;QD=38.87;ReadPosRankSum=0.111;VQSLOD=3.6984;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:72.14:0,72,962	0/0:8,0:8:15.05:0,15,210	0/0:17,0:14:36.88:0,37,456	0/0:16,0:10:27.09:0,27,369	0/0:8,0:7:15.05:0,15,210	0/0:27,0:27:69.20:0,69,928	0/0:29,0:28:75.25:0,75,1042	1/1:2,14:15:42.14:660,42,0	0/0:22,0:22:66.18:0,66,880	0/0:17,0:17:45.14:0,45,613	0/0:8,0:8:21.07:0,21,293	0/0:15,0:15:42.12:0,42,569	0/0:19,0:19:57.19:0,57,795	0/0:16,0:16:42.14:0,42,587	0/0:20,0:20:57.15:0,57,774	0/0:11,0:11:33.07:0,33,439	0/0:32,0:32:93.29:0,93,1270	0/0:16,0:16:42.14:0,42,587	1/1:0,11:11:33.11:521,33,0	1/1:0,14:14:36.12:573,36,0	1/1:2,56:57:99:2237,141,0	0/0:9,0:9:24.08:0,24,335	0/0:11,0:11:30.10:0,30,419	0/0:35,0:35:93.30:0,93,1284	0/0:7,0:6:18.06:0,18,248	1/1:1,20:21:57.15:854,57,0	1/1:1,20:21:45.11:710,45,0	1/1:0,3:3:3.01:43,3,0
chr10	86681280	.	G	GGA	603.37	PASS	AB=0.971;AC=23;AF=0.442;AN=52;BaseQRankSum=2.238;DP=539;FS=43.842;HRun=0;HaplotypeScore=104.6926;InbreedingCoeff=0.2553;MQ=61.03;MQ0=14;MQRankSum=-2.079;QD=1.78;ReadPosRankSum=-1.453;VQSLOD=0.2030;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,10:39:21.43:70,0,21	0/0:8,0:8:2.68:0,3,11	./.	0/1:34,0:16:0:0,0,0	0/0:20,0:20:15.13:0,15,156	0/0:19,0:20:17.18:0,17,135	0/0:21,0:21:15.02:0,15,146	1/1:22,0:21:5.85:34,6,0	0/0:13,0:14:5.79:0,6,46	1/1:23,0:23:2.97:20,3,0	0/1:15,0:14:14.96:15,0,27	0/1:21,0:21:9.08:9,0,42	0/0:14,0:14:11.56:0,12,111	0/0:21,0:20:0.70:0,1,51	0/0:8,0:8:2.84:0,3,14	1/1:15,0:15:2.97:20,3,0	1/1:20,0:18:20.96:233,21,0	0/1:23,0:24:30.45:33,0,30	1/1:20,0:18:9.38:63,9,0	./.	0/1:16,0:15:0:0,0,0	0/0:12,0:13:12.01:0,12,122	0/1:14,0:14:11.14:11,0,27	0/1:27,0:26:26.31:26,0,85	0/0:15,0:13:6.01:0,6,65	1/1:16,0:16:11.54:79,12,0	0/1:10,0:10:0:1,0,0	1/1:23,0:21:17.83:146,18,0
chr10	86681323	.	GGAAGAAGA	G	4127.63	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=7.848;DP=502;FS=21.862;HRun=0;HaplotypeScore=122.1760;InbreedingCoeff=0.8589;MQ=56.20;MQ0=13;MQRankSum=-5.718;QD=35.28;ReadPosRankSum=-3.072;VQSLOD=1.3218;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:61.91:0,62,2067	0/0:7,0:7:21.07:0,21,706	0/0:19,0:12:34:0,34,1284	0/0:30,0:16:40.68:0,41,1225	0/0:27,0:26:63.13:0,63,2500	0/0:22,0:22:63.21:0,63,2530	0/0:20,0:20:54.18:0,54,1990	1/1:3,19:19:54.12:1318,54,0	0/0:17,0:17:42.09:0,42,1559	0/0:17,0:17:42.10:0,42,1588	0/0:16,0:15:31.92:0,32,1220	0/0:14,0:14:30.05:0,30,940	0/0:13,0:13:27.08:0,27,933	0/0:14,0:14:30.10:0,30,1210	0/0:15,0:15:36.12:0,36,1432	0/0:14,0:14:36.12:0,36,1509	0/1:26,0:24:55.54:56,0,1661	0/0:17,0:17:51.18:0,51,1735	1/1:2,10:11:30.07:690,30,0	1/1:0,10:10:3.01:36,3,0	./.	0/0:12,0:10:30.10:0,30,1153	0/0:18,0:17:42.10:0,42,1385	0/0:30,0:29:25.23:0,25,2514	0/0:13,0:11:30.10:0,30,1273	1/1:2,15:16:45.99:1176,46,0	1/1:0,10:10:21.07:550,21,0	1/1:6,12:19:21:303,21,0
chr10	86681331	.	A	AG	1087.25	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=10.267;DP=492;FS=7.570;HRun=1;HaplotypeScore=78.6924;InbreedingCoeff=0.9538;MQ=66.62;MQ0=9;MQRankSum=-6.690;QD=11.44;ReadPosRankSum=-2.809;VQSLOD=0.5038;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:66.65:0,67,902	0/0:7,0:7:21.04:0,21,272	0/0:25,0:18:47.20:0,47,621	0/0:34,0:20:30.87:0,31,517	0/0:26,0:26:60.15:0,60,839	0/0:22,0:22:66.22:0,66,920	0/0:22,0:22:60.19:0,60,815	1/1:24,0:21:49.68:430,50,0	0/0:14,0:14:42.13:0,42,570	0/0:13,0:13:39.13:0,39,545	0/0:16,0:15:39.60:0,40,542	0/0:9,0:9:22.89:0,23,298	0/0:9,0:9:27.09:0,27,377	0/0:10,0:10:30.10:0,30,419	0/0:14,0:14:39.13:0,39,543	0/0:14,0:14:42.14:0,42,587	0/0:18,0:16:45.13:0,45,611	0/0:19,0:19:54.16:0,54,736	1/1:13,2:13:29.53:287,30,0	1/1:11,0:11:3.01:36,3,0	./.	0/0:15,0:14:42.14:0,42,575	0/0:21,0:20:51.74:0,52,640	0/0:24,0:24:63.21:0,63,881	0/0:13,0:12:33.11:0,33,462	1/1:15,1:16:37.30:284,37,0	1/1:10,1:10:20.55:129,21,0	1/1:18,0:18:11.92:99,12,0
chr10	86681971	.	ATGT	A	3616.70	PASS	AB=0.585;AC=13;AF=0.232;AN=56;BaseQRankSum=16.307;DP=682;FS=0.797;HRun=0;HaplotypeScore=153.8471;InbreedingCoeff=0.8979;MQ=90.50;MQ0=0;MQRankSum=-15.957;QD=23.64;ReadPosRankSum=3.095;VQSLOD=3.2954;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,2563	0/0:15,0:15:42.14:0,42,918	0/0:38,0:38:99:0,105,2327	0/0:21,0:21:51.17:0,51,1117	0/0:30,0:30:87.30:0,87,1955	0/0:18,0:17:51.18:0,51,1155	0/0:30,0:30:84.29:0,84,1870	1/1:18,14:32:39.11:463,39,0	0/0:22,0:22:63.22:0,63,1427	0/0:41,0:41:99:0,120,2616	0/0:21,0:21:63.19:0,63,1341	0/0:22,0:22:63.20:0,63,1385	0/0:27,0:27:78.26:0,78,1705	0/0:25,0:25:75.26:0,75,1682	0/0:26,0:26:72.22:0,72,1485	0/0:34,0:34:93.31:0,93,2066	0/0:26,0:26:78.27:0,78,1747	0/0:15,0:15:45.15:0,45,1020	1/1:4,6:10:18.05:216,18,0	1/1:2,23:25:63.18:715,63,0	1/1:5,10:15:27.01:285,27,0	0/0:27,0:27:75.26:0,75,1698	0/0:12,0:12:36.12:0,36,797	0/0:21,0:21:63.22:0,63,1428	0/0:18,0:18:54.19:0,54,1219	0/1:9,22:31:99:700,0,129	1/1:2,20:22:60.17:681,60,0	1/1:1,17:17:48.14:557,48,0
chr10	86681978	.	AGAATC	A	5799.93	PASS	AB=0.532;AC=13;AF=0.232;AN=56;BaseQRankSum=16.449;DP=665;FS=3.345;HRun=0;HaplotypeScore=165.6696;InbreedingCoeff=0.8992;MQ=90.90;MQ0=0;MQRankSum=-15.854;QD=49.15;ReadPosRankSum=3.879;VQSLOD=4.7445;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,4550	0/0:13,0:13:39.12:0,39,1208	0/0:40,0:40:99:0,117,3332	0/0:18,0:18:53.88:0,54,1465	0/0:31,0:31:93.32:0,93,2975	0/0:18,0:18:54.19:0,54,1792	0/0:29,0:29:87.30:0,87,2769	1/1:0,14:14:39.13:721,39,0	0/0:21,0:21:63.22:0,63,2048	0/0:41,0:41:99:0,123,4064	0/0:23,0:23:69.24:0,69,2227	0/0:22,0:22:66.23:0,66,2194	0/0:27,0:27:81.28:0,81,2618	0/0:29,0:29:87.30:0,87,2835	0/0:24,0:24:72.23:0,72,2271	0/0:32,0:32:96.32:0,96,3049	0/0:29,0:29:87.30:0,87,2782	0/0:16,0:16:48.16:0,48,1582	1/1:0,8:8:24.05:385,24,0	1/1:0,23:23:63.22:1132,63,0	1/1:0,10:10:27.09:477,27,0	0/0:29,0:29:87.30:0,87,2844	0/0:15,0:15:45.13:0,45,1408	0/0:24,0:24:72.25:0,72,2318	0/0:19,0:19:57.20:0,57,1849	0/1:3,22:25:99:1137,0,225	1/1:0,20:20:60.21:1077,60,0	1/1:1,17:17:48.16:871,48,0
chr10	86682566	.	A	AACCTAAGAC	9259.40	PASS	AB=0.853;AC=12;AF=0.222;AN=54;BaseQRankSum=-1.448;DP=496;FS=4.794;HRun=0;HaplotypeScore=161.9119;InbreedingCoeff=0.8032;MQ=65.62;MQ0=0;MQRankSum=-12.237;QD=87.35;ReadPosRankSum=-1.957;VQSLOD=4.6777;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.23:0,90,2277	0/0:12,0:12:27.08:0,27,736	0/1:11,0:10:5.37:5,0,384	0/0:14,0:13:36.01:0,36,807	0/0:18,0:18:51.15:0,51,1370	0/0:23,0:23:60.21:0,60,1740	0/0:27,0:27:61.26:0,61,1642	1/1:17,3:19:44.69:1306,45,0	0/0:10,0:10:30.09:0,30,802	0/0:20,0:20:57.19:0,57,1585	0/0:11,0:11:27.09:0,27,782	0/0:20,0:20:51.15:0,51,1412	0/0:7,0:7:21.07:0,21,635	0/0:18,0:18:54.17:0,54,1479	0/0:23,0:23:57.20:0,57,1720	0/0:7,0:7:21.06:0,21,569	0/0:40,0:40:95.99:0,96,2588	0/0:31,0:30:84.17:0,84,2310	1/1:13,2:14:30.10:1091,30,0	1/1:8,15:23:63.09:2536,63,0	./.	0/0:24,0:24:69.23:0,69,1863	0/0:18,0:18:51.18:0,51,1517	0/0:17,0:17:42.13:0,42,1141	0/0:15,0:15:42.14:0,42,1188	0/1:7,5:12:99:1251,0,145	1/1:12,7:19:57.20:2216,57,0	1/1:2,4:6:18.06:853,18,0
chr10	86682592	.	CT	C	475.45	PASS	AB=0.848;AC=9;AF=0.161;AN=56;BaseQRankSum=1.912;DP=501;FS=22.265;HRun=14;HaplotypeScore=109.5631;InbreedingCoeff=0.2332;MQ=62.36;MQ0=2;MQRankSum=-3.085;QD=3.87;ReadPosRankSum=1.704;VQSLOD=0.2271;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:59.76:0,60,513	0/0:10,0:10:14.99:0,15,130	0/0:9,2:9:0.09:0,0,29	0/0:13,0:11:6.42:0,6,38	0/1:19,4:22:42.46:42,0,196	0/0:20,0:21:38.85:0,39,336	0/0:23,2:26:7.46:0,7,316	0/0:17,0:16:23.55:0,24,165	0/1:11,3:15:35.54:36,0,163	0/1:15,7:22:29.58:116,0,30	1/1:8,7:15:28.03:190,28,0	0/0:15,0:18:26.70:0,27,228	0/0:9,0:10:11.13:0,11,121	0/0:17,0:17:17.97:0,18,159	0/0:20,1:22:48.68:0,49,408	0/1:9,1:10:2.63:3,0,103	0/0:29,1:34:22.68:0,23,402	1/1:12,11:23:12.80:224,13,0	0/0:9,0:9:6.63:0,7,79	0/0:16,0:18:33.25:0,33,213	0/0:1,0:2:2.88:0,3,15	0/0:20,1:23:30.29:0,30,403	0/0:17,1:18:10.31:0,10,209	0/0:21,1:22:21.91:0,22,332	0/0:18,1:19:2.95:0,3,269	0/1:12,1:14:0.02:0,0,94	0/0:14,0:18:1.34:0,1,142	0/0:9,0:12:23.39:0,23,151
chr10	86682679	.	A	AC	3695.19	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-0.354;DP=539;FS=7.832;HRun=3;HaplotypeScore=88.7968;InbreedingCoeff=0.9873;MQ=67.84;MQ0=3;MQRankSum=-7.471;QD=33.59;ReadPosRankSum=-0.857;VQSLOD=3.3674;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,111,1267	0/0:8,0:8:21.06:0,21,252	0/0:18,0:15:32.49:0,32,448	0/0:14,0:10:16.24:0,16,274	0/0:21,0:21:63.19:0,63,754	0/0:20,0:20:51.16:0,51,612	0/0:33,0:33:78.22:0,78,921	1/1:4,13:16:39.13:545,39,0	0/0:20,0:20:51.16:0,51,612	0/0:20,0:20:57.17:0,57,682	0/0:19,0:18:51.15:0,51,606	0/0:21,0:21:51.16:0,51,611	0/0:16,0:16:42.11:0,42,491	0/0:18,0:18:48.15:0,48,576	0/0:24,0:24:66.20:0,66,791	0/0:8,0:8:24.07:0,24,288	0/0:33,0:33:93.29:0,93,1114	0/0:22,0:22:54.16:0,54,643	1/1:4,7:11:24.08:335,24,0	1/1:1,13:13:39.13:544,39,0	1/1:4,21:25:57.02:747,57,0	0/0:15,0:15:36.11:0,36,427	0/0:15,0:15:39.11:0,39,456	0/0:35,0:35:99:0,99,1161	0/0:6,0:6:15.05:0,15,180	1/1:4,18:22:24.19:759,24,0	1/1:1,14:16:45.13:596,45,0	1/1:1,4:5:12.04:168,12,0
chr10	86682755	.	T	TG	5458.92	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-3.428;DP=586;FS=8.677;HRun=2;HaplotypeScore=63.1674;InbreedingCoeff=0.9939;MQ=83.78;MQ0=0;MQRankSum=-4.502;QD=36.64;ReadPosRankSum=0.065;VQSLOD=4.9741;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,168,2044	0/0:8,0:8:24.08:0,24,297	0/0:22,0:22:63.01:0,63,637	0/0:15,0:15:35.27:0,35,445	0/0:13,0:13:39.11:0,39,469	0/0:17,0:17:48.11:0,48,556	0/0:22,0:22:60.17:0,60,718	1/1:2,15:17:39.11:517,39,0	0/0:9,0:9:24.07:0,24,286	0/0:22,0:22:66.19:0,66,792	0/0:8,0:8:21.07:0,21,260	0/0:20,0:20:57.18:0,57,705	0/0:16,0:16:48.14:0,48,584	0/0:16,0:16:45.09:0,45,539	0/0:30,0:30:81.25:0,81,992	0/0:7,0:7:21.07:0,21,260	0/0:32,0:32:87.24:0,87,1049	0/0:35,0:35:99:0,105,1253	1/1:2,17:19:51.16:711,51,0	1/1:0,17:17:48.16:672,48,0	1/1:3,41:44:99:1474,108,0	0/0:23,0:23:63.17:0,63,746	0/0:13,0:13:39.10:0,39,459	0/0:32,0:32:90.26:0,90,1088	0/0:21,0:21:57.14:0,57,677	1/1:1,18:19:20.27:735,20,0	1/1:0,28:28:81.74:1156,82,0	1/1:2,3:5:15.03:194,15,0
chr10	86683347	.	AG	A	2208.20	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=11.520;DP=442;FS=0.391;HRun=1;HaplotypeScore=70.0496;InbreedingCoeff=0.9167;MQ=66.17;MQ0=8;MQRankSum=-7.756;QD=13.46;ReadPosRankSum=-5.103;VQSLOD=0.6455;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:26:56.68:355,57,0	1/1:6,1:7:7.94:37,8,0	0/0:25,0:18:7.15:0,7,305	0/0:15,0:10:3.32:0,3,106	0/0:22,0:22:56.70:0,57,569	0/0:21,0:21:60.84:0,61,627	0/0:10,0:9:13.50:0,14,209	1/1:10,0:9:23.70:159,24,0	0/0:21,0:21:40.54:0,41,560	1/1:23,1:23:60.74:475,61,0	1/1:18,2:20:39.08:279,39,0	0/0:22,1:22:39.66:0,40,519	0/0:13,0:13:29.70:0,30,265	0/0:14,0:13:27.02:0,27,358	0/0:14,0:14:35.87:0,36,362	0/0:23,0:23:63.73:0,64,661	1/1:21,1:17:38.23:240,38,0	1/1:14,0:14:29.09:193,29,0	1/1:3,0:3:8.91:61,9,0	1/1:8,0:7:20.50:126,20,0	1/1:7,0:7:14.79:95,15,0	0/0:14,0:14:35.33:0,35,380	0/0:23,0:23:60.50:0,61,592	0/0:19,0:18:43.30:0,43,434	0/0:21,0:21:58.27:0,58,580	1/1:11,0:11:31.16:200,31,0	1/1:10,0:9:29.59:193,30,0	1/1:1,0:1:2.94:18,3,0
chr10	86683350	.	A	AT	1413.37	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.958;DP=463;FS=19.410;HRun=0;HaplotypeScore=76.3612;InbreedingCoeff=0.9125;MQ=68.38;MQ0=8;MQRankSum=-7.251;QD=24.80;ReadPosRankSum=-0.634;VQSLOD=2.5388;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:32.43:0,32,348	0/0:6,0:6:15.03:0,15,177	0/0:31,0:23:61.33:0,61,675	0/0:17,0:12:5.68:0,6,221	0/0:22,0:22:57.17:0,57,765	0/0:21,0:21:63.21:0,63,879	0/0:10,0:9:26.97:0,27,330	1/1:1,9:9:24.08:314,24,0	0/0:21,0:21:62.97:0,63,816	0/0:25,0:24:50.87:0,51,378	0/0:20,0:20:40.10:0,40,363	0/0:23,0:22:62.65:0,63,809	0/0:13,0:13:30.07:0,30,395	0/0:15,0:14:42.06:0,42,515	0/0:16,0:16:45.06:0,45,573	0/0:22,0:22:66.22:0,66,922	0/0:23,0:18:10.22:0,10,243	0/0:15,0:15:34.49:0,34,215	1/1:0,3:3:9.03:119,9,0	1/1:1,8:8:21.06:248,21,0	1/1:0,8:8:15.04:173,15,0	0/0:15,0:15:45.09:0,45,589	0/0:21,0:21:63.17:0,63,849	0/0:19,0:18:45.15:0,45,629	0/0:23,0:23:66.16:0,66,858	1/1:2,10:12:10.26:353,10,0	1/1:0,10:9:30.08:356,30,0	1/1:0,5:5:3.01:35,3,0
chr10	86683715	.	AGGCTTGGT	A	6143.29	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.187;DP=544;FS=2.748;HRun=0;HaplotypeScore=144.4769;InbreedingCoeff=0.9629;MQ=65.35;MQ0=0;MQRankSum=-12.178;QD=51.19;ReadPosRankSum=0.369;VQSLOD=4.9032;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,4598	0/0:6,0:6:18.06:0,18,715	0/0:14,0:14:39.13:0,39,1472	0/0:19,0:19:33.15:0,33,1541	0/0:24,0:24:63.22:0,63,2526	0/0:14,0:14:42.14:0,42,1699	0/0:28,0:28:75.26:0,75,3170	1/1:6,14:20:42.13:1114,42,0	0/0:23,0:23:66.22:0,66,2644	0/0:24,0:24:69.24:0,69,3023	0/0:18,0:18:51.18:0,51,2098	0/0:18,0:18:54.19:0,54,2358	0/0:9,0:9:20.14:0,20,822	0/0:14,0:14:42.14:0,42,1710	0/0:17,0:17:51.16:0,51,2058	0/0:13,0:13:39.13:0,39,1526	0/0:37,0:37:99:0,105,4506	0/0:16,0:16:45.15:0,45,1911	1/1:4,11:15:33.10:875,33,0	1/1:3,13:16:24.08:679,24,0	1/1:2,15:17:2.94:85,3,0	0/0:7,0:7:18.06:0,18,557	0/0:20,0:20:51.18:0,51,2133	0/0:47,0:47:99:0,132,5695	0/0:16,0:16:42.13:0,42,1698	1/1:2,17:19:48.16:1358,48,0	1/1:1,17:18:42.62:1186,43,0	1/1:2,13:15:30.10:846,30,0
chr10	86684166	.	CATA	C	227.19	PASS	AB=1.000;AC=10;AF=0.185;AN=54;BaseQRankSum=8.233;DP=729;FS=28.929;HRun=0;HaplotypeScore=127.2986;InbreedingCoeff=0.6314;MQ=63.65;MQ0=1;MQRankSum=-7.804;QD=6.31;ReadPosRankSum=-2.059;VQSLOD=0.9091;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,1:47:99:0,117,2565	0/0:6,0:6:15.05:0,15,318	0/0:41,0:34:98.36:0,98,2113	0/0:28,0:26:60.56:0,61,1293	0/0:20,1:21:48.11:0,48,1067	0/0:28,1:28:73.83:0,74,1681	0/0:46,0:46:99:0,109,2793	1/1:4,1:4:6.90:45,7,0	0/0:40,0:40:99:0,117,2718	0/0:37,0:36:99:0,102,2405	0/0:11,0:11:30.10:0,30,646	0/0:42,0:42:99:0,123,2848	0/0:39,0:39:99:0,108,2507	0/0:39,0:39:99:0,117,2703	0/0:36,0:34:99:0,99,2257	0/0:32,1:32:70.06:0,70,1900	0/0:36,0:36:99:0,103,2336	0/0:36,0:36:91.23:0,91,2354	1/1:2,0:2:3.01:34,3,0	1/1:5,0:5:5.91:49,6,0	./.	0/0:21,0:21:60.20:0,60,1382	0/0:18,0:17:42.12:0,42,893	0/0:47,0:46:99:0,132,2992	0/0:23,0:22:63.21:0,63,1453	0/1:11,0:10:19.76:118,0,20	0/1:10,0:10:5.04:86,0,5	1/1:3,0:3:3.01:34,3,0
chr10	86684168	.	TAAC	T	578.35	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=8.510;DP=725;FS=40.472;HRun=0;HaplotypeScore=122.9694;InbreedingCoeff=0.8848;MQ=62.55;MQ0=1;MQRankSum=-8.221;QD=22.24;ReadPosRankSum=-1.989;VQSLOD=1.5237;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,111,2632	0/0:8,0:8:23.93:0,24,420	0/0:42,0:34:99:0,101,2128	0/0:28,0:26:60.51:0,61,1369	0/0:21,0:21:47.91:0,48,1152	0/0:28,0:27:63.96:0,64,1809	0/0:47,1:48:99:0,115,3031	1/1:1,4:4:11.99:126,12,0	0/0:42,0:42:99:0,123,2933	0/0:35,1:35:99:0,105,2526	0/0:13,0:13:35.90:0,36,798	0/0:44,0:44:99:0,129,3102	0/0:39,0:39:99:0,111,2664	0/0:40,0:40:99:0,120,2908	0/0:35,2:35:99:0,102,2425	0/0:30,2:31:55.33:0,55,1981	0/0:37,0:37:99:0,106,2475	0/0:35,1:36:74.70:0,75,2425	1/1:0,1:1:3.01:55,3,0	1/1:2,2:4:5.91:66,6,0	./.	0/0:20,0:20:60.21:0,60,1463	0/0:16,0:15:41.90:0,42,906	0/0:45,2:46:99:0,132,3145	0/0:23,1:23:66.16:0,66,1543	1/1:4,4:7:18.03:260,18,0	1/1:3,4:7:12.04:179,12,0	1/1:0,1:1:3.01:54,3,0
chr10	86684185	.	ATCC	A	177.27	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=7.241;DP=741;FS=6.537;HRun=0;HaplotypeScore=120.6374;InbreedingCoeff=0.7855;MQ=58.35;MQ0=2;MQRankSum=-5.482;QD=12.66;ReadPosRankSum=-2.022;VQSLOD=2.6142;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:99:0,102,2071	0/0:9,0:9:24.08:0,24,546	0/0:34,0:26:55.31:0,55,997	0/0:37,0:32:34.60:0,35,1148	0/0:19,0:19:48.13:0,48,964	0/0:29,0:28:66.90:0,67,1332	0/0:53,0:52:99:0,125,2812	0/0:5,0:3:2.42:0,2,13	0/0:37,0:37:99:0,108,2385	0/0:38,0:37:99:0,108,2273	0/0:15,0:15:42.09:0,42,751	0/0:43,0:44:99:0,126,2619	0/0:45,0:45:99:0,129,2675	0/0:45,0:45:99:0,132,2731	0/0:37,0:35:93.30:0,93,2001	0/0:33,1:33:78.64:0,79,1912	0/0:33,0:33:96.27:0,96,2036	0/0:42,0:42:93.20:0,93,2391	1/1:1,1:2:3.01:49,3,0	1/1:0,2:3:5.91:51,6,0	./.	0/0:24,0:24:63.19:0,63,1345	0/0:14,0:13:30.09:0,30,626	0/0:50,1:50:99:0,135,2745	0/0:23,0:22:57.20:0,57,1220	1/1:1,2:2:6.02:85,6,0	1/1:2,3:5:6.02:89,6,0	1/1:0,1:1:3.01:41,3,0
chr10	86684225	.	T	TC	42.85	PASS	AC=6;AF=0.125;AN=48;BaseQRankSum=5.598;DP=758;FS=4.450;HRun=0;HaplotypeScore=98.7002;InbreedingCoeff=0.8252;MQ=66.00;MQ0=4;MQRankSum=-5.528;QD=2.86;ReadPosRankSum=-0.521;VQSLOD=2.8899;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:37:87:0,87,1213	0/0:12,0:12:33.11:0,33,461	0/0:32,1:24:66.20:0,66,893	0/0:50,0:37:99:0,107,1427	0/0:20,0:21:48.14:0,48,652	0/0:27,0:25:69.20:0,69,928	0/0:64,3:65:99:0,129,2106	1/1:5,1:4:2.97:20,3,0	0/0:33,0:33:96.32:0,96,1341	0/0:29,0:29:81.26:0,81,1117	0/0:20,0:20:54.17:0,54,755	0/0:38,1:39:99:0,108,1491	0/0:44,1:45:99:0,120,1652	0/0:42,1:44:99:0,123,1663	0/0:39,1:39:57.78:0,58,1377	0/0:36,1:38:99:0,104,1430	0/0:29,1:30:84.25:0,84,1137	0/0:32,0:33:46.03:0,46,1213	./.	1/1:5,1:6:2.50:9,2,0	./.	0/0:24,0:24:60.10:0,60,837	0/0:8,0:8:18.06:0,18,252	0/0:56,0:56:99:0,141,1892	0/0:18,1:18:48.16:0,48,670	./.	1/1:1,2:3:9.01:119,9,0	./.
chr10	86684245	.	T	TCAC	387.57	PASS	AB=0.975;AC=8;AF=0.148;AN=54;BaseQRankSum=7.815;DP=836;FS=0.789;HRun=0;HaplotypeScore=132.4271;InbreedingCoeff=0.3240;MQ=51.89;MQ0=39;MQRankSum=-7.234;QD=2.89;ReadPosRankSum=-4.571;VQSLOD=1.0190;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:34:77.88:0,78,1108	0/0:14,0:14:36.07:0,36,499	0/0:21,0:12:22.07:0,22,199	0/0:40,0:22:41.19:0,41,563	0/0:21,0:20:35.95:0,36,539	0/0:24,0:18:36.06:0,36,479	0/0:63,0:61:99:0,144,2139	0/1:33,0:16:55.52:56,0,66	0/0:32,0:32:78.19:0,78,1116	0/0:31,0:21:57.12:0,57,787	0/0:21,0:21:48.05:0,48,607	0/0:36,0:36:90.18:0,90,1238	0/0:43,0:42:96.22:0,96,1358	0/0:41,1:41:99:0,105,1480	0/0:33,1:31:35.29:0,35,1094	0/0:33,0:33:93.16:0,93,1382	0/0:25,0:24:57.02:0,57,753	0/0:31,0:31:72.15:0,72,1034	0/1:23,1:11:28.85:29,0,104	1/1:29,2:29:0.23:2,0,0	./.	0/0:20,0:20:44.93:0,45,575	0/0:12,0:12:30.02:0,30,385	0/0:56,0:55:99:0,131,1925	0/0:18,0:17:42.03:0,42,561	0/1:29,2:22:24.03:192,0,24	1/1:8,1:8:14.09:230,14,0	0/1:5,0:5:1.15:1,0,15
chr10	86684260	.	CCACCACCATCAT	C	508.19	PASS	AB=0.957;AC=9;AF=0.161;AN=56;BaseQRankSum=7.443;DP=931;FS=7.886;HRun=0;HaplotypeScore=240.6802;InbreedingCoeff=0.0269;MQ=45.13;MQ0=79;MQRankSum=-9.008;QD=1.92;ReadPosRankSum=-4.116;VQSLOD=0.9908;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:36:57.69:0,58,2273	0/0:15,0:14:30.10:0,30,967	0/0:15,0:6:6.02:0,6,150	0/1:28,0:11:0.82:1,0,33	0/0:25,0:22:42.11:0,42,1068	0/0:23,0:16:33.04:0,33,959	0/0:72,0:66:99:0,110,3752	0/0:50,0:25:18.53:0,19,232	0/0:35,0:35:90.24:0,90,3439	0/0:41,0:22:56.95:0,57,1574	0/0:21,0:19:33.11:0,33,1069	0/0:37,0:32:75.24:0,75,2771	0/0:38,0:36:81.23:0,81,2908	0/0:40,0:37:93.28:0,93,3194	0/0:35,0:32:24.21:0,24,2331	0/0:32,0:31:78.21:0,78,2843	0/0:27,0:25:60.03:0,60,1794	0/0:22,0:22:54.15:0,54,1293	0/1:33,0:18:61.45:136,0,61	0/1:27,21:43:8.81:9,0,53	1/1:60,0:34:2.80:13,3,0	0/0:19,0:18:34.26:0,34,983	0/0:18,0:16:30.10:0,30,1014	0/0:59,0:57:99:0,134,4750	0/1:19,0:17:1.59:2,0,1017	0/1:52,0:36:99:142,0,249	0/1:11,0:10:38.10:138,0,38	0/1:13,0:10:22.76:191,0,23
chr10	86684266	.	C	CCAT	580.80	PASS	AB=0.973;AC=9;AF=0.161;AN=56;BaseQRankSum=5.800;DP=974;FS=16.515;HRun=0;HaplotypeScore=139.9001;InbreedingCoeff=0.2137;MQ=43.21;MQ0=98;MQRankSum=-8.415;QD=1.89;ReadPosRankSum=-3.501;VQSLOD=0.2627;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:36:81.79:0,82,1065	0/0:15,0:14:33.07:0,33,442	0/0:13,0:5:6.02:0,6,87	0/0:28,0:9:5.88:0,6,36	0/0:24,0:21:36.06:0,36,472	0/0:24,0:18:36.04:0,36,464	0/0:80,0:73:99:0,132,1698	0/1:60,0:29:99:141,0,172	0/0:35,0:34:93.25:0,93,1354	0/0:45,0:24:60.04:0,60,723	0/0:20,0:18:33.03:0,33,476	0/0:40,0:35:78.18:0,78,1074	0/0:35,0:33:81.21:0,81,1176	0/0:39,0:36:96.17:0,96,1318	0/0:33,0:31:44.17:0,44,933	0/0:31,0:30:75.68:0,76,1076	0/0:28,0:26:66.07:0,66,831	0/0:21,0:21:51.04:0,51,637	0/1:42,0:22:37.46:37,0,89	1/1:50,1:45:5.40:54,5,0	1/1:62,1:33:2.92:17,3,0	0/0:19,0:18:32.93:0,33,455	0/0:21,0:18:42.08:0,42,554	0/0:56,0:54:99:0,138,1913	0/0:19,0:17:39.01:0,39,524	0/1:59,1:40:99:152,0,417	0/1:13,2:14:25.66:308,0,26	0/1:16,0:11:4.73:5,0,67
chr10	86684317	.	TCAC	T	290.52	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=6.336;DP=1158;FS=0.989;HRun=0;HaplotypeScore=158.9622;InbreedingCoeff=0.4934;MQ=40.30;MQ0=135;MQRankSum=-5.227;QD=1.77;ReadPosRankSum=-2.935;VQSLOD=1.9004;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:31:63.19:0,63,1180	0/0:13,0:11:30.10:0,30,611	0/1:43,0:5:3.47:3,0,25	0/0:54,0:11:12.63:0,13,277	0/0:22,0:16:15.05:0,15,290	0/0:30,0:22:39.12:0,39,746	0/0:85,0:73:99:0,126,2474	0/0:41,0:18:11.99:0,12,162	0/0:48,0:44:99:0,129,2618	0/0:53,0:31:68.97:0,69,1143	0/0:26,0:20:33.10:0,33,649	0/0:53,0:47:99:0,111,2152	0/0:44,0:43:93.71:0,94,1813	0/0:45,0:42:99:0,105,1926	0/0:33,0:29:48.14:0,48,869	0/0:40,0:34:80.91:0,81,1520	0/0:29,0:27:49.43:0,49,1214	1/1:6,18:23:29.95:381,30,0	0/0:21,0:10:20.96:0,21,232	0/0:60,0:51:18.37:0,18,242	0/1:97,0:57:11.56:12,0,25	0/0:22,0:18:33.03:0,33,649	0/0:23,0:19:35.97:0,36,654	0/0:70,0:67:99:0,161,3073	0/0:19,0:13:21.03:0,21,360	0/0:77,0:46:89.30:0,89,1112	0/0:22,0:18:33.39:0,33,342	0/0:23,0:22:35.33:0,35,541
chr10	86684332	.	T	TCAC	740.57	PASS	AB=0.964;AC=6;AF=0.107;AN=56;BaseQRankSum=8.886;DP=1266;FS=5.036;HRun=0;HaplotypeScore=159.9483;InbreedingCoeff=0.2372;MQ=39.39;MQ0=158;MQRankSum=-8.883;QD=3.18;ReadPosRankSum=-1.231;VQSLOD=1.9808;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:31:62.62:0,63,964	0/0:16,0:14:36.03:0,36,493	0/0:73,0:8:23.97:0,24,269	0/0:72,0:15:42.54:0,43,573	0/0:26,0:19:30.04:0,30,386	0/0:30,0:24:42.13:0,42,623	0/0:85,0:75:99:0,141,1928	0/1:59,0:23:45.31:45,0,96	0/0:48,0:45:99:0,123,1748	0/0:65,0:38:89.77:0,90,1177	0/0:28,0:20:35.94:0,36,449	0/0:52,0:49:99:0,117,1693	0/0:39,0:38:84.42:0,84,1221	0/0:44,0:42:99:0,108,1559	0/0:34,0:30:57.16:0,57,851	0/0:40,0:35:78.22:0,78,1181	0/0:30,0:28:15.85:0,16,915	0/0:25,0:23:33.01:0,33,320	0/0:32,0:10:14.84:0,15,145	0/1:58,2:52:4.16:4,0,138	0/0:103,0:62:8.80:0,9,69	0/0:29,0:19:36.05:0,36,524	0/0:25,0:16:30.06:0,30,431	0/0:65,0:63:99:0,161,2356	0/0:31,0:22:51.07:0,51,679	0/1:63,5:39:99:519,0,239	0/1:22,1:19:61.56:142,0,62	1/1:13,10:22:10.74:151,11,0
chr10	86684344	.	T	TCAC	716.16	PASS	AB=0.986;AC=9;AF=0.161;AN=56;BaseQRankSum=12.410;DP=1187;FS=27.652;HRun=0;HaplotypeScore=156.7920;InbreedingCoeff=0.5162;MQ=40.41;MQ0=139;MQRankSum=-11.622;QD=2.71;ReadPosRankSum=-3.918;VQSLOD=-0.4849;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:33:78.01:0,78,1142	0/0:12,0:11:27.08:0,27,403	0/0:76,0:14:24.98:0,25,323	0/0:83,0:24:47.59:0,48,674	0/0:22,0:18:29.67:0,30,418	0/0:27,0:21:39.08:0,39,596	0/0:70,0:65:99:0,138,2040	0/0:58,0:20:8.17:0,8,207	0/0:44,0:41:99:0,105,1484	0/0:58,0:35:78.21:0,78,1133	0/0:25,0:17:27.05:0,27,389	0/0:53,0:51:99:0,117,1735	0/0:40,0:40:86.88:0,87,1257	0/0:40,0:38:99:0,102,1488	0/0:34,0:31:59.62:0,60,860	0/0:37,0:32:78.13:0,78,1164	0/0:25,1:25:11.76:0,12,833	0/0:27,0:26:43.24:0,43,478	0/1:28,0:6:11.21:24,0,11	0/1:45,2:41:79.51:80,0,102	0/1:96,0:63:34.01:34,0,36	0/0:26,0:16:33.05:0,33,477	0/0:23,0:16:27.06:0,27,376	0/0:65,0:63:99:0,152,2334	0/0:33,0:25:54.14:0,54,794	1/1:54,1:32:54.82:316,55,0	1/1:18,1:16:24.73:243,25,0	1/1:19,0:19:0.74:168,1,0
chr10	86684347	.	C	CCAT	959.71	PASS	AB=0.857;AC=10;AF=0.179;AN=56;BaseQRankSum=11.210;DP=1166;FS=64.479;HRun=0;HaplotypeScore=149.4903;InbreedingCoeff=0.6962;MQ=40.96;MQ0=128;MQRankSum=-10.465;QD=3.76;ReadPosRankSum=-3.383;VQSLOD=-0.5649;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:34:90.07:0,90,1187	0/0:12,0:11:27.04:0,27,348	0/0:76,0:16:22.72:0,23,362	0/0:81,0:25:56.26:0,56,751	0/0:22,0:18:30.08:0,30,423	0/0:26,0:20:39.13:0,39,595	0/0:71,0:67:99:0,141,1969	0/0:52,2:16:17.97:0,18,201	0/0:43,0:40:87.27:0,87,1318	0/0:56,0:34:72.19:0,72,1029	0/0:25,0:17:27:0,27,373	0/0:53,0:51:99:0,120,1696	0/0:39,0:39:93.01:0,93,1334	0/0:41,0:39:99:0,99,1472	0/0:37,0:34:60.01:0,60,841	0/0:35,0:32:78.23:0,78,1110	0/0:27,0:26:29.79:0,30,791	0/0:27,0:26:45.11:0,45,629	1/1:27,0:5:3.01:31,3,0	0/1:44,0:39:81.04:168,0,81	0/1:57,33:65:41.93:67,0,42	0/0:26,0:16:30.10:0,30,455	0/0:23,0:16:30.01:0,30,365	0/0:61,0:59:99:0,152,2209	0/0:33,0:25:54.17:0,54,810	1/1:52,1:31:28.06:342,28,0	1/1:17,0:15:34.96:302,35,0	1/1:17,2:19:12.02:209,12,0
chr10	86684371	.	CCAT	C	1203.04	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=7.154;DP=911;FS=27.440;HRun=0;HaplotypeScore=131.5125;InbreedingCoeff=0.7989;MQ=59.37;MQ0=38;MQRankSum=-8.943;QD=6.61;ReadPosRankSum=-4.215;VQSLOD=-0.2923;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:40:93.03:0,93,1693	0/0:7,0:7:15.05:0,15,335	0/0:47,0:25:59.98:0,60,1118	0/0:51,0:30:83.19:0,83,1406	0/0:19,0:18:42.03:0,42,756	0/0:24,0:21:42.14:0,42,895	0/0:60,0:57:99:0,132,2743	0/1:33,0:12:45.14:45,0,78	0/0:39,0:38:99:0,102,1832	0/0:41,0:34:90.24:0,90,1678	0/0:16,0:15:26.92:0,27,395	0/0:45,0:45:99:0,99,2054	0/0:32,0:32:81.23:0,81,1571	0/0:40,0:39:99:0,105,2163	0/0:30,0:29:66.10:0,66,1359	0/0:29,0:28:66.21:0,66,1351	0/0:22,0:22:59.86:0,60,1186	0/0:33,0:32:63.20:0,63,1306	1/1:3,7:7:17.99:241,18,0	0/0:26,3:28:0.49:0,0,87	1/1:74,4:68:25.19:198,25,0	0/0:16,0:14:28.82:0,29,546	0/0:15,0:12:30.09:0,30,584	0/0:60,0:60:99:0,147,2961	0/0:31,0:26:54.17:0,54,1124	1/1:27,4:24:51.28:448,51,0	1/1:12,4:16:4.83:250,5,0	1/1:12,2:14:15.01:191,15,0
chr10	86684884	.	GT	G	6748.68	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=18.116;DP=734;FS=18.168;HRun=2;HaplotypeScore=86.0871;InbreedingCoeff=0.9981;MQ=84.07;MQ0=0;MQRankSum=0.445;QD=36.09;ReadPosRankSum=0.128;VQSLOD=3.0032;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,156,2256	0/0:7,0:7:21.07:0,21,315	0/0:19,0:19:54.18:0,54,809	0/0:29,0:28:72.24:0,72,1031	0/0:26,0:26:69.22:0,69,1010	0/0:24,0:24:69.23:0,69,1034	0/0:27,0:27:81.26:0,81,1176	1/1:0,27:27:78.25:1012,78,0	0/0:28,0:28:84.27:0,84,1238	0/0:41,0:41:99:0,117,1702	0/0:17,0:17:42.13:0,42,611	0/0:17,0:17:51.17:0,51,764	0/0:21,0:21:63.21:0,63,944	0/0:14,0:14:39.13:0,39,583	0/0:35,0:35:99:0,105,1556	0/0:25,0:25:75.25:0,75,1124	0/0:37,0:37:99:0,111,1619	0/0:38,0:38:99:0,114,1707	1/1:2,21:23:63.18:790,63,0	1/1:0,23:23:66.21:850,66,0	1/1:0,48:48:99:1714,132,0	0/0:25,0:25:75.25:0,75,1101	0/0:12,0:12:36.12:0,36,538	0/0:32,0:32:96.31:0,96,1420	0/0:19,0:19:51.16:0,51,745	1/1:2,36:38:24.38:1293,24,0	1/1:0,21:21:63.20:818,63,0	1/1:0,7:7:21.07:273,21,0
chr10	86685635	.	GGA	G	5653.53	PASS	AB=0.532;AC=13;AF=0.232;AN=56;BaseQRankSum=15.472;DP=571;FS=6.201;HRun=0;HaplotypeScore=88.2932;InbreedingCoeff=0.9030;MQ=78.12;MQ0=0;MQRankSum=-4.093;QD=35.78;ReadPosRankSum=-0.161;VQSLOD=6.6240;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1776	0/0:8,0:8:24.08:0,24,439	0/0:15,0:15:27.25:0,27,520	0/0:21,0:20:26.07:0,26,646	0/0:21,0:21:60.18:0,60,1025	0/0:27,0:27:81.28:0,81,1478	0/0:24,0:24:69.21:0,69,1203	1/1:1,29:30:88.12:1204,88,0	0/0:19,0:19:57.18:0,57,1011	0/0:21,0:21:60.16:0,60,1063	0/0:17,0:17:51.16:0,51,897	0/0:15,0:15:42.13:0,42,716	0/0:16,0:16:44.98:0,45,777	0/0:15,0:15:45.15:0,45,821	0/0:22,0:22:63.19:0,63,1092	0/0:12,0:12:36.10:0,36,600	0/0:30,0:30:87.30:0,87,1590	0/0:22,0:22:66.21:0,66,1159	1/1:1,18:19:48.09:642,48,0	1/1:0,21:21:63.10:876,63,0	1/1:1,25:26:54.18:788,54,0	0/0:17,0:17:48.16:0,48,878	0/0:15,0:15:42.13:0,42,736	0/0:29,0:29:87.24:0,87,1469	0/0:14,0:14:42.13:0,42,740	0/1:4,29:33:13.17:1159,0,13	1/1:4,15:19:45.15:670,45,0	1/1:0,10:10:21.07:314,21,0
chr10	86685853	.	G	GA	229.17	PASS	AB=0.913;AC=3;AF=0.054;AN=56;BaseQRankSum=-0.348;DP=567;FS=2.048;HRun=10;HaplotypeScore=87.8513;InbreedingCoeff=0.5458;MQ=62.18;MQ0=5;MQRankSum=0.175;QD=6.03;ReadPosRankSum=-0.949;VQSLOD=1.6028;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:32:30.90:0,31,460	0/0:7,0:7:14.98:0,15,123	0/0:17,0:8:9.01:0,9,131	0/0:11,0:6:2.80:0,3,65	0/0:31,0:31:77.87:0,78,637	0/0:19,0:21:52.97:0,53,424	0/0:18,0:17:35.93:0,36,295	0/0:24,0:24:44.90:0,45,367	0/0:17,0:18:43.96:0,44,349	0/0:15,0:15:32.94:0,33,271	0/0:23,0:23:56.83:0,57,455	0/0:15,0:15:38.95:0,39,320	0/0:20,1:21:24.82:0,25,402	0/0:20,0:20:53.92:0,54,442	0/0:15,0:15:35.96:0,36,296	0/0:16,0:16:44.95:0,45,369	0/0:40,0:40:95.87:0,96,788	1/1:5,12:17:30.08:320,30,0	0/1:19,2:21:12.21:12,0,273	0/0:17,0:17:13.27:0,13,312	0/0:25,0:26:61.91:0,62,495	0/0:16,0:16:41.95:0,42,345	0/0:15,0:15:38.92:0,39,317	0/0:23,0:23:39.40:0,39,321	0/0:19,0:19:44.90:0,45,365	0/0:28,0:30:78.97:0,79,627	0/0:24,0:24:65.88:0,66,537	0/0:15,0:14:29.95:0,30,246
chr10	86686706	.	C	CTGTGTG	2678.55	PASS	AB=0.799;AC=19;AF=0.365;AN=52;BaseQRankSum=1.640;DP=668;FS=14.322;HRun=0;HaplotypeScore=174.5997;InbreedingCoeff=0.5227;MQ=65.26;MQ0=8;MQRankSum=-4.022;QD=9.08;ReadPosRankSum=-6.169;VQSLOD=-0.6113;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:47,4:51:31.84:647,32,0	1/1:4,0:6:6.02:173,6,0	./.	./.	0/0:19,0:20:27.09:0,27,504	0/0:27,0:28:10.86:0,11,551	0/0:25,0:25:36.08:0,36,647	1/1:20,0:20:12.04:175,12,0	0/0:32,0:31:63.20:0,63,1163	1/1:30,0:29:36.11:717,36,0	0/0:10,0:10:0.47:0,0,1	0/0:23,0:24:18.75:0,19,1000	0/0:15,0:16:33.11:0,33,639	0/0:19,0:19:33.11:0,33,661	0/0:23,0:25:30.09:0,30,538	0/0:14,0:15:27.09:0,27,530	1/1:13,1:20:12.04:331,12,0	0/0:19,0:19:25.38:0,25,478	0/1:12,0:12:5.03:32,0,5	0/1:8,0:21:46.35:138,0,46	0/1:26,0:42:48.24:100,0,48	0/0:28,0:28:39.59:0,40,718	0/0:5,0:19:20.54:0,21,231	0/0:31,0:31:53.85:0,54,1027	0/1:17,0:18:32.30:32,0,504	1/1:21,0:27:10.49:322,10,0	0/1:14,0:29:76.38:121,0,76	1/1:7,0:14:5.19:72,5,0
chr10	86687270	.	CGT	C	401.34	PASS	AB=0.905;AC=24;AF=0.545;AN=44;BaseQRankSum=4.859;DP=549;FS=25.222;HRun=0;HaplotypeScore=77.4718;InbreedingCoeff=-0.0483;MQ=65.65;MQ0=16;MQRankSum=-1.017;QD=1.08;ReadPosRankSum=2.199;VQSLOD=-0.0765;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:27:0:0,0,0	./.	./.	./.	0/0:10,0:10:6.02:0,6,84	0/1:19,1:22:34.18:34,0,38	0/1:34,1:37:42.60:43,0,131	./.	0/1:18,1:19:18.97:19,0,112	1/1:18,0:19:2.73:14,3,0	./.	0/1:12,3:14:13.97:14,0,155	0/0:4,0:4:6.01:0,6,57	1/1:10,1:11:6.02:64,6,0	0/1:21,1:23:31.16:31,0,98	0/1:9,2:11:48.80:49,0,106	0/1:23,0:25:0.49:9,0,0	0/1:16,0:18:0:0,0,0	1/1:24,0:26:5.68:28,6,0	./.	1/1:52,0:51:2.66:15,3,0	0/0:12,0:12:12.03:0,12,157	0/0:10,0:10:3:0,3,25	0/1:24,2:26:51.22:51,0,204	0/1:8,1:9:26.37:26,0,38	1/1:19,0:22:8.52:42,9,0	1/1:17,0:21:14.12:69,14,0	1/1:8,0:13:5.68:28,6,0
chr10	86688805	.	AC	A	3562.54	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.177;DP=521;FS=7.752;HRun=7;HaplotypeScore=81.5538;InbreedingCoeff=0.9836;MQ=73.13;MQ0=0;MQRankSum=-4.299;QD=24.91;ReadPosRankSum=1.099;VQSLOD=4.0195;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.08:0,51,572	0/0:12,0:12:21.07:0,21,262	0/0:23,0:21:17.82:0,18,401	0/0:10,0:8:8.98:0,9,77	0/0:22,0:22:63.20:0,63,787	0/0:15,0:15:39.12:0,39,490	0/0:16,0:16:42.12:0,42,514	1/1:5,20:25:57.12:580,57,0	0/0:21,0:21:60.17:0,60,729	0/0:24,0:24:66.19:0,66,799	0/0:9,0:9:27.09:0,27,338	0/0:22,0:22:66.19:0,66,812	0/0:9,0:9:27.09:0,27,339	0/0:14,0:14:34.35:0,34,406	0/0:22,0:22:60.17:0,60,730	0/0:14,0:14:41.16:0,41,487	0/0:36,0:36:99:0,102,1271	0/0:26,0:26:66.21:0,66,829	1/1:3,16:19:48.10:487,48,0	1/1:1,9:10:27.06:275,27,0	1/1:3,21:24:56.66:581,57,0	0/0:15,0:15:42.12:0,42,515	0/0:14,0:14:39.12:0,39,490	0/0:20,0:20:59.86:0,60,726	0/0:17,0:17:48.60:0,49,580	1/1:8,26:34:46.43:782,46,0	1/1:2,24:26:69.15:704,69,0	1/1:0,5:5:15.03:153,15,0
chr10	86689302	.	G	GAGA	4936.19	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.490;DP=549;FS=0.000;HRun=0;HaplotypeScore=80.2134;InbreedingCoeff=0.9933;MQ=87.77;MQ0=0;MQRankSum=-0.919;QD=58.76;ReadPosRankSum=3.528;VQSLOD=6.5812;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:99:0,138,2228	1/1:0,6:6:15.05:340,15,0	0/0:24,0:23:56.95:0,57,845	0/0:23,0:20:47:0,47,650	0/0:24,0:24:72.25:0,72,1192	0/0:21,0:21:60.20:0,60,999	0/0:23,0:23:57.18:0,57,924	0/0:18,0:18:54.18:0,54,898	0/0:16,0:16:48.13:0,48,747	1/1:0,28:29:84.27:1859,84,0	1/1:0,15:16:42.10:903,42,0	0/0:23,0:23:66.22:0,66,1074	0/0:11,0:11:33.11:0,33,550	0/0:18,0:18:54.18:0,54,897	0/0:11,0:11:30.10:0,30,500	0/0:8,0:8:21.07:0,21,350	1/1:3,28:33:81.28:1834,81,0	0/0:23,0:23:66.18:0,66,1045	0/0:21,0:21:63.22:0,63,1048	0/0:9,0:9:24.08:0,24,399	0/0:32,0:32:87.28:0,87,1423	0/0:18,0:18:51.17:0,51,841	0/0:10,0:10:27.09:0,27,450	0/0:21,0:21:60.16:0,60,969	0/0:14,0:14:36.12:0,36,598	0/0:23,0:23:66.23:0,66,1098	0/0:13,0:13:39.13:0,39,650	0/0:15,0:15:42.10:0,42,630
chr10	86691851	.	CATGTGAT	C	4764.64	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.039;DP=653;FS=2.216;HRun=0;HaplotypeScore=148.8576;InbreedingCoeff=0.9983;MQ=89.32;MQ0=0;MQRankSum=-10.578;QD=68.07;ReadPosRankSum=1.156;VQSLOD=5.3665;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,160,6112	1/1:1,7:8:21.07:522,21,0	0/0:23,0:23:63.63:0,64,2385	0/0:27,0:27:81.27:0,81,2811	0/0:20,0:20:60.21:0,60,2458	0/0:21,0:21:63.22:0,63,2556	0/0:27,0:27:81.25:0,81,2883	0/0:28,0:28:81.26:0,81,3089	0/0:31,0:31:93.30:0,93,3648	1/1:1,27:28:81.25:2022,81,0	1/1:1,13:14:36.12:916,36,0	0/0:19,0:19:51.16:0,51,1987	0/0:15,0:15:45.15:0,45,1842	0/0:35,0:35:99:0,105,4202	0/0:21,0:21:60.18:0,60,2231	0/0:16,0:16:48.16:0,48,1885	1/1:1,19:20:51.17:1304,51,0	0/0:20,0:20:60.21:0,60,2450	0/0:20,0:20:57.20:0,57,2215	0/0:13,0:13:36.12:0,36,1475	0/0:34,0:34:99:0,102,4127	0/0:19,0:19:57.20:0,57,2258	0/0:11,0:11:30.10:0,30,1122	0/0:39,0:39:99:0,117,4474	0/0:20,0:20:57.20:0,57,2291	0/0:36,1:37:27.51:0,28,4121	0/0:23,0:23:66.23:0,66,2679	0/0:11,0:11:33.11:0,33,1352
chr10	86693959	.	T	TCA	5513.17	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=0.052;DP=1042;FS=5.098;HRun=0;HaplotypeScore=151.5230;InbreedingCoeff=0.9913;MQ=62.03;MQ0=2;MQRankSum=-5.068;QD=38.83;ReadPosRankSum=3.806;VQSLOD=5.9194;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,117,1511	1/1:1,12:13:33.11:566,33,0	0/0:32,0:24:11.27:0,11,526	0/0:46,0:41:43.14:0,43,764	0/0:26,0:26:66.20:0,66,852	0/0:28,0:28:69.17:0,69,848	0/0:37,0:37:81.24:0,81,1048	0/0:41,0:41:96.29:0,96,1224	0/0:47,0:47:99:0,126,1638	1/1:7,37:44:99:1955,117,0	1/1:1,18:19:41.93:718,42,0	0/0:56,0:56:99:0,150,1939	0/0:44,0:44:99:0,123,1597	0/0:38,0:38:99:0,111,1427	0/0:48,0:48:99:0,114,1480	0/0:26,0:26:72.23:0,72,946	1/1:8,25:33:68.83:1181,69,0	1/1:6,27:33:66.14:1095,66,0	0/0:25,0:24:66.21:0,66,866	0/0:32,0:32:78.23:0,78,1008	0/0:111,0:110:99:0,295,3796	0/0:41,0:41:99:0,108,1420	0/0:21,0:21:54.18:0,54,706	0/0:47,0:47:99:0,111,1453	0/0:35,0:35:96.28:0,96,1221	0/0:42,1:43:68.87:0,69,1466	0/0:23,0:23:66.21:0,66,864	0/0:10,0:10:27.09:0,27,353
chr10	86694025	.	A	ACT	2610.45	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=14.476;DP=1145;FS=0.887;HRun=0;HaplotypeScore=194.3692;InbreedingCoeff=0.9704;MQ=57.09;MQ0=8;MQRankSum=-7.432;QD=22.50;ReadPosRankSum=-0.978;VQSLOD=3.8469;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,122,1635	1/1:7,10:17:35.93:407,36,0	0/0:53,0:26:57.10:0,57,728	0/0:60,0:38:68.95:0,69,855	0/0:18,0:18:54.18:0,54,765	0/0:23,0:23:59.90:0,60,799	0/0:47,0:47:99:0,110,1421	0/0:59,0:57:99:0,162,1987	0/0:55,0:55:99:0,156,2031	1/1:19,26:45:99:1474,113,0	1/1:9,13:22:18.95:251,19,0	0/0:61,0:61:99:0,162,2128	0/0:46,0:46:99:0,135,1784	0/0:38,0:38:99:0,108,1404	0/0:49,0:49:99:0,138,1860	0/0:46,0:46:99:0,135,1794	1/1:14,16:32:36.54:638,37,0	0/0:26,0:26:6.59:0,7,204	0/0:23,0:23:57.12:0,57,711	0/0:30,0:30:87.26:0,87,1206	0/0:137,0:136:99:0,367,4938	0/0:28,0:28:81.22:0,81,1085	0/0:13,0:13:36.12:0,36,514	0/0:59,0:59:99:0,141,1859	0/0:28,0:28:84.19:0,84,1116	0/0:41,0:41:99:0,102,1397	0/0:27,0:27:69.14:0,69,873	0/0:10,0:10:18.52:0,19,333
chr10	86694073	.	TCA	T	468.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.713;DP=1112;FS=1.962;HRun=0;HaplotypeScore=171.6151;InbreedingCoeff=0.9571;MQ=58.29;MQ0=9;MQRankSum=-3.287;QD=26.03;ReadPosRankSum=-1.501;VQSLOD=3.8730;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,144,2429	0/0:16,0:16:30.95:0,31,329	0/0:84,0:39:80.07:0,80,1174	0/0:100,1:50:63.55:0,64,981	0/0:23,0:23:60.19:0,60,1035	0/0:23,0:23:60.20:0,60,1027	0/0:56,0:56:99:0,144,2409	0/0:44,0:43:99:0,123,2046	0/0:46,0:46:99:0,132,2228	0/0:42,0:42:99:0,120,1261	0/0:16,0:14:11.04:0,11,92	0/0:51,0:51:99:0,144,2480	0/0:44,0:44:99:0,132,2099	0/0:34,0:34:99:0,99,1599	0/0:53,0:53:99:0,148,2446	0/0:35,0:35:99:0,102,1642	0/0:27,0:27:35.58:0,36,335	1/1:5,13:18:19.55:560,20,0	0/0:22,0:21:63.13:0,63,920	0/0:18,0:18:45.15:0,45,775	0/0:124,0:123:99:0,319,5421	0/0:19,0:19:48.15:0,48,792	0/0:21,0:21:48.16:0,48,819	0/0:58,0:58:99:0,153,2596	0/0:19,0:19:48.16:0,48,847	0/0:30,0:30:90.29:0,90,1525	0/0:20,0:20:57.18:0,57,967	0/0:13,0:13:39.13:0,39,681
chr10	86694079	.	A	ACT	3122.70	PASS	AB=0.625;AC=9;AF=0.161;AN=56;BaseQRankSum=4.470;DP=1101;FS=3.068;HRun=0;HaplotypeScore=161.1153;InbreedingCoeff=0.8383;MQ=58.10;MQ0=8;MQRankSum=-4.483;QD=26.46;ReadPosRankSum=0.476;VQSLOD=4.6866;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,144,1889	1/1:5,10:15:26.98:423,27,0	0/0:78,0:37:84.05:0,84,998	0/0:98,0:48:68.04:0,68,961	0/0:22,0:22:60.17:0,60,836	0/0:23,0:23:66.15:0,66,850	0/0:54,0:54:99:0,138,1797	0/0:50,0:49:99:0,141,1680	0/0:50,0:50:99:0,141,1842	1/1:15,28:43:99:1791,111,0	1/1:5,10:13:15.05:268,15,0	0/0:49,0:49:99:0,144,1892	0/0:43,0:44:99:0,126,1611	0/0:33,0:33:83.91:0,84,1112	0/0:53,0:53:99:0,145,1857	0/0:36,0:36:96.18:0,96,1223	0/1:10,15:25:14.46:633,0,14	1/1:20,0:20:5.98:165,6,0	0/0:21,0:20:54.10:0,54,684	0/0:17,0:17:42.10:0,42,546	0/0:125,0:124:99:0,323,4178	0/0:18,0:18:45.09:0,45,585	0/0:18,0:18:48.13:0,48,648	0/0:58,0:58:99:0,156,2036	0/0:17,0:17:48.14:0,48,666	0/0:31,0:31:87.19:0,87,1105	0/0:20,0:20:57.14:0,57,773	0/0:13,0:13:39.13:0,39,555
chr10	86694187	.	ACT	A	4381.98	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.176;DP=938;FS=12.406;HRun=0;HaplotypeScore=165.8640;InbreedingCoeff=0.9752;MQ=63.22;MQ0=4;MQRankSum=0.213;QD=19.74;ReadPosRankSum=-0.241;VQSLOD=4.6419;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,114,1853	0/0:2,0:10:17.73:0,18,148	0/0:54,0:36:64.38:0,64,849	0/0:52,1:40:37.01:0,37,689	0/0:21,0:20:38.12:0,38,694	0/0:19,1:20:12.96:0,13,690	0/0:37,1:38:58.19:0,58,1429	1/1:29,8:34:64.94:682,65,0	0/0:46,2:48:49.92:0,50,1780	0/0:22,0:33:83.47:0,83,731	0/0:9,0:16:14.22:0,14,85	0/0:47,0:47:99:0,126,2006	0/0:35,0:35:75.56:0,76,1665	0/0:38,0:38:99:0,108,1754	0/0:48,0:48:99:0,117,1912	0/0:42,0:42:99:0,111,1818	0/0:12,0:16:9.07:0,9,75	0/0:28,0:28:35.85:0,36,633	1/1:20,6:26:41.86:443,42,0	1/1:22,3:25:56.63:467,57,0	1/1:66,7:73:99:1440,131,0	0/0:35,0:35:90.29:0,90,1426	0/0:28,0:28:78.22:0,78,1226	0/0:40,0:40:70.71:0,71,1342	0/0:15,0:15:42.14:0,42,702	1/1:30,2:32:13.56:659,14,0	1/1:20,2:22:46.20:482,46,0	1/1:6,1:7:20.98:208,21,0
chr10	86694204	.	T	TAC	7611.97	PASS	AB=0.956;AC=25;AF=0.446;AN=56;BaseQRankSum=6.204;DP=901;FS=11.790;HRun=0;HaplotypeScore=158.6603;InbreedingCoeff=0.7992;MQ=61.79;MQ0=7;MQRankSum=-0.052;QD=18.00;ReadPosRankSum=-3.864;VQSLOD=3.5453;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,45:56:62.69:1520,63,0	1/1:3,0:7:11.74:90,12,0	0/0:42,0:24:17.69:0,18,233	0/1:45,0:33:1.75:2,0,337	0/0:18,0:17:42.11:0,42,486	0/0:18,0:19:47.27:0,47,558	0/0:34,0:35:78.74:0,79,1002	1/1:35,5:37:51.08:702,51,0	0/0:43,0:43:99:0,110,1285	1/1:25,0:34:33.48:278,33,0	1/1:11,0:18:14.23:87,14,0	0/0:45,0:46:99:0,111,1259	0/0:41,0:41:98.72:0,99,1127	0/0:38,0:40:99:0,99,1132	0/0:38,0:39:99:0,99,1174	0/0:40,0:41:99:0,108,1284	1/1:16,0:20:22.54:193,23,0	1/1:17,0:24:9.73:158,10,0	1/1:16,3:19:33.08:431,33,0	1/1:26,2:28:75.20:975,75,0	1/1:60,5:65:40.78:1520,41,0	0/0:34,0:35:95.55:0,96,1098	0/0:26,0:26:66.21:0,66,806	0/0:38,0:38:81.01:0,81,950	0/0:15,0:15:36.11:0,36,440	1/1:31,1:32:72.15:939,72,0	0/1:21,3:24:37.82:494,0,38	0/1:9,0:9:12.61:222,0,13
chr10	86695976	.	C	CT	2340.96	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-4.876;DP=610;FS=13.979;HRun=12;HaplotypeScore=72.7435;InbreedingCoeff=0.8782;MQ=68.25;MQ0=2;MQRankSum=-0.236;QD=14.82;ReadPosRankSum=0.566;VQSLOD=3.0454;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,31:37:69.06:661,69,0	1/1:0,13:13:36.06:350,36,0	0/0:18,0:13:7.12:0,7,56	0/1:19,0:13:17.92:26,0,18	0/0:33,0:33:79.69:0,80,574	0/0:20,0:20:30.14:0,30,349	0/0:19,0:19:41.62:0,42,296	0/0:35,1:36:39.28:0,39,441	0/0:13,0:13:32.77:0,33,239	1/1:5,11:16:14.13:293,14,0	1/1:2,25:28:69.01:658,69,0	0/0:16,0:16:38.27:0,38,272	0/0:7,0:7:14.91:0,15,109	0/0:20,0:20:44.64:0,45,323	0/0:16,0:16:26.77:0,27,193	0/0:11,0:11:20.84:0,21,151	1/1:6,16:22:31.66:370,32,0	1/1:6,0:23:34.07:171,34,0	0/0:30,0:30:65.58:0,66,479	0/0:37,0:38:79.47:0,79,571	0/0:19,0:19:41.72:0,42,304	0/0:25,0:25:53.62:0,54,388	0/0:23,0:24:29.12:0,29,328	0/0:16,0:16:35.76:0,36,261	0/0:18,0:18:35.73:0,36,263	0/0:24,0:25:55.68:0,56,400	0/0:26,0:29:72.57:0,73,508	0/0:18,0:19:46.72:0,47,330
chr10	86697187	.	C	CCT	1306.51	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-2.672;DP=302;FS=18.127;HRun=0;HaplotypeScore=53.2847;InbreedingCoeff=0.6975;MQ=83.81;MQ0=4;MQRankSum=-1.456;QD=13.20;ReadPosRankSum=1.968;VQSLOD=1.7799;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:45.12:0,45,556	1/1:0,2:3:6.02:83,6,0	0/0:32,0:17:24.87:0,25,244	0/1:50,0:33:2.58:3,0,382	0/0:7,0:7:21.07:0,21,271	0/0:7,0:8:7.70:0,8,254	0/0:10,0:10:21.07:0,21,271	0/0:6,0:6:11.70:0,12,141	0/0:8,0:8:24.08:0,24,311	1/1:5,2:7:6.02:102,6,0	1/1:1,3:4:6.02:102,6,0	0/0:5,0:5:12.04:0,12,155	0/0:4,0:4:9.03:0,9,117	0/0:3,0:3:3.01:0,3,39	0/0:5,0:5:15.05:0,15,195	0/0:4,0:4:12.04:0,12,155	1/1:1,20:22:45.15:765,45,0	1/1:3,10:13:5.32:402,5,0	0/0:4,0:4:9.03:0,9,117	0/0:4,0:4:9.03:0,9,117	0/0:21,0:21:45.13:0,45,570	0/0:10,0:10:24.06:0,24,298	0/0:6,0:6:15.05:0,15,195	0/0:19,0:19:51.17:0,51,663	0/0:8,0:8:21.07:0,21,268	0/0:4,0:4:9.03:0,9,117	0/0:12,0:12:36.12:0,36,467	0/0:7,0:7:21.07:0,21,271
chr10	86697257	.	TTTTA	T	98.18	PASS	AB=0.842;AC=5;AF=0.119;AN=42;BaseQRankSum=-0.129;DP=98;FS=6.409;HRun=0;HaplotypeScore=24.0530;InbreedingCoeff=0.1871;MQ=85.93;MQ0=6;MQRankSum=1.503;QD=5.17;ReadPosRankSum=0.773;VQSLOD=0.2212;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:6:14.95:0,15,119	./.	0/0:6,0:3:3.01:0,3,32	0/0:23,0:12:7.05:0,7,52	0/0:3,0:3:9:0,9,81	./.	0/0:2,0:2:5.99:0,6,50	0/0:3,0:3:5.95:0,6,42	0/0:2,0:2:6:0,6,54	1/1:2,0:2:3.47:29,3,0	1/1:0,1:1:3:25,3,0	0/0:2,0:2:6:0,6,52	0/0:2,0:2:3.01:0,3,78	./.	0/0:2,0:2:6.01:0,6,56	./.	0/1:13,3:14:43.49:142,0,43	0/0:10,0:11:11.84:0,12,107	0/0:1,0:1:3:0,3,28	0/0:5,0:5:13.23:0,13,106	./.	./.	0/0:1,0:1:2.68:0,3,11	0/0:2,0:2:6:0,6,53	0/0:2,0:2:6.01:0,6,56	0/0:1,0:1:3:0,3,28	0/0:3,0:2:6:0,6,53	./.
chr10	86698072	.	T	TCTC	857.17	PASS	AB=0.724;AC=9;AF=0.161;AN=56;BaseQRankSum=-0.744;DP=437;FS=1.670;HRun=0;HaplotypeScore=91.1543;InbreedingCoeff=0.7806;MQ=66.03;MQ0=20;MQRankSum=-1.111;QD=10.71;ReadPosRankSum=1.851;VQSLOD=3.4234;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:57.62:0,58,765	1/1:5,4:11:10.96:270,11,0	0/0:22,0:12:29.83:0,30,359	0/0:26,0:11:11.68:0,12,157	0/0:12,0:12:29.96:0,30,424	0/0:20,0:20:35.99:0,36,471	0/0:15,0:15:27:0,27,417	0/0:21,0:19:44.94:0,45,652	0/0:12,0:11:13.09:0,13,398	1/1:4,7:13:21:320,21,0	1/1:3,7:12:11.83:158,12,0	0/0:4,0:3:6.02:0,6,105	0/0:12,0:11:32.89:0,33,406	0/0:16,0:16:26.93:0,27,511	0/0:17,0:17:33.80:0,34,450	0/0:7,0:7:18.06:0,18,310	1/1:12,9:21:13.62:252,14,0	0/1:13,0:16:12.79:13,0,69	0/0:14,0:13:33.58:0,34,475	0/0:17,0:17:42.14:0,42,604	0/0:6,0:5:11.95:0,12,151	0/0:9,0:8:12.86:0,13,164	0/0:20,0:20:44.93:0,45,679	0/0:14,0:11:20.41:0,20,311	0/0:19,0:19:36.03:0,36,534	0/0:25,0:25:61.41:0,61,874	0/0:13,0:13:20.60:0,21,278	0/0:6,0:4:9.03:0,9,125
chr10	86699023	.	GA	G	765.30	PASS	AB=0.889;AC=3;AF=0.054;AN=56;BaseQRankSum=7.012;DP=576;FS=1.363;HRun=10;HaplotypeScore=64.5253;InbreedingCoeff=0.6447;MQ=74.50;MQ0=0;MQRankSum=-0.957;QD=12.15;ReadPosRankSum=2.397;VQSLOD=3.3908;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,34:39:95.97:833,96,0	0/0:7,0:7:21.06:0,21,232	0/0:18,0:18:27.90:0,28,296	0/1:21,3:22:38:38,0,213	0/0:16,0:16:33.09:0,33,365	0/0:20,0:20:51.14:0,51,564	0/0:12,0:12:36.02:0,36,374	0/0:22,0:22:48.12:0,48,524	0/0:18,0:18:51.03:0,51,531	0/0:16,0:18:47.80:0,48,493	0/0:15,0:15:36.10:0,36,398	0/0:22,0:22:57.15:0,57,631	0/0:15,0:15:45.12:0,45,498	0/0:25,0:25:66.15:0,66,719	0/0:22,0:22:66.18:0,66,730	0/0:26,0:27:72.03:0,72,776	0/0:25,0:25:66.18:0,66,730	0/0:26,0:26:63.17:0,63,697	0/0:19,0:19:48.11:0,48,522	0/0:27,0:27:72.18:0,72,781	0/0:20,0:21:38.76:0,39,385	0/0:18,0:18:42.11:0,42,465	0/0:19,0:20:56.95:0,57,598	0/0:33,0:33:90.24:0,90,995	0/0:13,0:13:33.09:0,33,365	0/0:23,0:23:60.15:0,60,656	0/0:22,0:22:60.15:0,60,656	0/0:9,0:9:27.06:0,27,290
chr10	86699243	.	A	AAAG	4908.53	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-9.428;DP=557;FS=5.648;HRun=0;HaplotypeScore=75.8639;InbreedingCoeff=0.9865;MQ=66.56;MQ0=3;MQRankSum=-0.011;QD=51.13;ReadPosRankSum=2.842;VQSLOD=6.9017;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1678	1/1:4,7:11:18.06:360,18,0	0/0:22,0:13:14.07:0,14,412	0/0:21,0:12:12.80:0,13,422	0/0:24,0:24:66.21:0,66,1099	0/0:24,0:24:72.25:0,72,1214	0/0:12,0:11:33.10:0,33,523	0/0:34,0:34:93.30:0,93,1530	0/0:19,0:19:57.18:0,57,942	1/1:1,23:23:72.21:1389,72,0	1/1:2,10:12:27.09:611,27,0	0/0:22,0:22:63.22:0,63,1058	0/0:12,0:12:36.11:0,36,574	0/0:19,0:19:54.16:0,54,857	0/0:19,0:19:54.18:0,54,901	0/0:15,0:15:42.14:0,42,705	1/1:1,31:32:75.26:1681,75,0	1/1:1,15:16:39.13:868,39,0	0/0:19,0:17:48.15:0,48,767	0/0:29,0:29:84.25:0,84,1375	0/0:8,0:8:24.06:0,24,354	0/0:17,0:17:48.16:0,48,803	0/0:20,0:20:60.18:0,60,940	0/0:20,0:20:60.21:0,60,1023	0/0:19,0:19:54.16:0,54,868	0/0:17,0:17:51.17:0,51,841	0/0:25,0:25:69.24:0,69,1161	0/0:10,0:10:27.09:0,27,449
chr10	86699890	.	TA	T	1343.10	PASS	AB=0.898;AC=23;AF=0.411;AN=56;BaseQRankSum=5.880;DP=415;FS=0.955;HRun=14;HaplotypeScore=54.2041;InbreedingCoeff=0.3836;MQ=73.55;MQ0=5;MQRankSum=-0.275;QD=6.02;ReadPosRankSum=2.269;VQSLOD=2.1781;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:27:40.40:117,40,0	0/1:7,0:7:19.84:20,0,30	0/0:30,0:16:28.59:0,29,211	0/0:18,0:10:2.28:0,2,45	0/0:18,0:18:10.48:0,10,220	0/0:21,0:21:50.94:0,51,451	0/1:11,3:15:9.09:9,0,227	1/1:13,15:29:17.22:272,17,0	0/1:8,1:9:7.82:8,0,32	0/1:6,0:6:17.97:18,0,35	1/1:11,0:11:9.22:41,9,0	0/0:12,0:12:26.84:0,27,228	0/0:8,0:10:0.42:0,0,133	0/0:9,0:9:20.67:0,21,168	0/0:7,1:8:0.44:0,0,147	0/0:6,0:6:9.01:0,9,83	0/1:23,0:23:51.82:52,0,64	0/0:4,0:18:15:0,15,99	1/1:7,9:15:17.92:173,18,0	1/1:3,10:13:23.62:159,24,0	1/1:0,9:11:21.93:135,22,0	0/1:5,0:5:9.25:9,0,23	0/0:6,0:7:17.68:0,18,130	0/0:9,0:9:9.67:0,10,187	0/0:25,0:25:44.41:0,44,442	0/1:8,16:24:14.54:223,0,15	1/1:2,15:17:32.59:220,33,0	1/1:3,4:6:11.85:80,12,0
chr10	86699904	.	AG	A	932.45	PASS	AB=0.643;AC=9;AF=0.161;AN=56;BaseQRankSum=1.175;DP=455;FS=2.005;HRun=5;HaplotypeScore=58.9807;InbreedingCoeff=0.8534;MQ=76.25;MQ0=3;MQRankSum=-1.446;QD=11.95;ReadPosRankSum=0.163;VQSLOD=1.2876;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:79.94:0,80,537	0/1:4,5:9:7.47:122,0,7	0/0:30,1:17:31.52:0,32,263	0/0:18,0:11:11.69:0,12,97	0/0:20,0:20:48.03:0,48,479	0/0:19,0:19:50.98:0,51,545	0/0:16,0:16:39.57:0,40,390	0/0:30,0:29:67.35:0,67,409	0/0:9,0:9:21.84:0,22,180	1/1:10,1:11:26.86:233,27,0	1/1:4,10:14:20.93:191,21,0	0/0:12,0:12:30.06:0,30,333	0/0:12,0:12:24.68:0,25,248	0/0:11,0:11:30.05:0,30,315	0/0:9,0:9:26.07:0,26,271	0/0:6,0:6:17.96:0,18,157	1/1:16,7:23:44.35:427,44,0	1/1:21,0:21:19.24:123,19,0	0/0:13,0:13:29.60:0,30,154	0/0:16,0:16:34.87:0,35,204	0/0:12,0:12:19.63:0,20,95	0/0:6,0:6:8.68:0,9,72	0/0:10,0:10:30:0,30,286	0/0:11,0:11:20.27:0,20,215	0/0:26,0:26:67.31:0,67,658	0/0:27,0:27:43.81:0,44,288	0/0:22,0:21:33.44:0,33,195	0/0:8,0:8:13.72:0,14,83
chr10	86700195	.	CCTCTCCTTCGGTGT	C	4069.45	PASS	AB=0.963;AC=9;AF=0.161;AN=56;BaseQRankSum=9.371;DP=666;FS=0.000;HRun=0;HaplotypeScore=253.9059;InbreedingCoeff=0.8451;MQ=88.13;MQ0=0;MQRankSum=-8.247;QD=54.99;ReadPosRankSum=-0.050;VQSLOD=2.9732;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:66:99:0,199,13611	1/1:0,7:7:15.05:648,15,0	0/0:30,0:30:90.31:0,90,5314	0/0:24,0:24:68.41:0,68,3551	0/0:15,0:15:45.15:0,45,3078	0/0:23,0:22:69.24:0,69,4738	0/0:37,0:37:99:0,108,6868	0/0:24,0:24:72.25:0,72,4354	0/0:33,0:33:99:0,99,6680	1/1:4,14:19:42.14:1663,42,0	1/1:0,6:6:15.01:537,15,0	0/0:24,0:24:72.25:0,72,5069	0/0:24,0:24:69.22:0,69,4257	0/0:17,0:17:51.18:0,51,3595	0/0:31,0:31:93.32:0,93,6353	0/0:28,0:27:81.28:0,81,5378	1/1:3,13:15:27.09:1167,27,0	0/0:11,0:11:33.11:0,33,2353	0/0:18,0:18:54.18:0,54,3209	0/0:21,0:21:63.22:0,63,3725	0/0:57,0:57:99:0,172,11340	0/0:13,0:13:35.79:0,36,2321	0/0:13,0:13:36.12:0,36,2199	0/0:35,0:35:99:0,102,7118	0/0:17,0:17:51.18:0,51,3480	0/1:25,1:25:54.48:54,0,4391	0/0:28,0:28:84.29:0,84,5908	0/0:3,0:3:9.03:0,9,641
chr10	86703191	.	GCAGA	G	4200.80	PASS	AB=0.929;AC=28;AF=0.500;AN=56;BaseQRankSum=14.137;DP=682;FS=11.885;HRun=0;HaplotypeScore=123.3868;InbreedingCoeff=0.8644;MQ=59.40;MQ0=2;MQRankSum=-2.065;QD=11.51;ReadPosRankSum=2.844;VQSLOD=2.5137;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,43:58:59.80:966,60,0	1/1:7,0:11:9.01:84,9,0	0/0:23,0:19:23.95:0,24,255	0/0:26,0:22:26.47:0,26,343	0/0:23,0:23:16.14:0,16,791	0/0:20,0:20:11.12:0,11,676	0/0:25,0:25:39.05:0,39,700	1/1:15,6:20:17.98:150,18,0	0/0:28,1:29:20.87:0,21,1327	1/1:7,0:21:26.96:237,27,0	1/1:13,0:20:8.99:77,9,0	0/0:21,0:21:60.15:0,60,1225	0/0:26,0:26:57.14:0,57,1180	0/1:17,2:19:3.32:3,0,693	0/0:31,0:31:69.18:0,69,1591	0/1:19,1:20:3.20:3,0,779	1/1:14,0:33:27.03:252,27,0	1/1:10,0:25:15.02:140,15,0	1/1:16,8:24:23.91:293,24,0	1/1:10,7:17:20.94:253,21,0	1/1:16,18:34:21.07:338,21,0	0/0:17,0:17:21.02:0,21,288	0/0:15,0:15:18.05:0,18,387	0/0:37,0:37:81.21:0,81,1759	0/0:23,0:23:42.08:0,42,817	1/1:13,11:24:33.03:391,33,0	1/1:11,20:31:54.18:869,54,0	1/1:2,5:7:9.03:145,9,0
chr10	86705629	.	ATT	A	436.09	PASS	AB=0.800;AC=15;AF=0.341;AN=44;BaseQRankSum=3.297;DP=315;FS=11.073;HRun=2;HaplotypeScore=20.2570;InbreedingCoeff=0.5482;MQ=40.38;MQ0=90;MQRankSum=-1.204;QD=8.23;ReadPosRankSum=0.681;VQSLOD=-0.7626;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:1:3.01:40,3,0	./.	0/0:78,0:1:0:0,0,0	0/0:63,0:8:17.81:0,18,148	0/0:16,0:11:3.01:0,3,39	0/0:12,0:11:15.05:0,15,193	0/1:6,2:6:24.59:25,0,40	1/1:6,5:5:12.04:153,12,0	0/0:7,0:7:18.06:0,18,241	./.	./.	0/0:6,0:4:12.04:0,12,163	0/0:4,0:2:3.01:0,3,44	0/0:4,0:4:9.01:0,9,112	0/0:7,0:6:14.93:0,15,157	0/0:4,0:4:12.04:0,12,166	./.	1/1:3,4:4:6.02:84,6,0	1/1:6,5:5:6.02:84,6,0	./.	1/1:2,0:1:3.01:45,3,0	0/0:3,0:2:2.97:0,3,20	0/0:3,0:2:2.68:0,3,11	0/0:18,0:9:14.54:0,15,185	0/0:12,0:8:14.22:0,14,149	1/1:4,4:4:9:105,9,0	1/1:2,0:1:3.01:46,3,0	./.
chr10	86705762	.	GAACCAAAA	G	508.97	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=6.136;DP=393;FS=15.329;HRun=0;HaplotypeScore=95.6339;InbreedingCoeff=0.4728;MQ=42.65;MQ0=24;MQRankSum=-4.724;QD=10.39;ReadPosRankSum=3.625;VQSLOD=0.9607;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:32:99:323,0,136	0/0:11,0:10:30.10:0,30,1009	0/0:8,0:3:2.44:0,2,6	0/0:3,0:1:3.01:0,3,31	0/0:17,0:16:31.66:0,32,846	0/0:20,0:20:51.16:0,51,1277	0/0:18,0:17:39.13:0,39,1020	0/0:19,0:18:44.20:0,44,967	0/0:8,0:8:15.04:0,15,326	0/0:18,0:17:42.11:0,42,1017	0/0:16,0:14:42.13:0,42,1215	0/0:13,0:12:30.10:0,30,867	0/0:11,0:11:27.09:0,27,691	0/0:12,0:12:30.07:0,30,568	0/0:13,0:12:36.12:0,36,1005	0/0:11,0:11:23.55:0,24,789	0/0:19,0:18:51.17:0,51,1566	1/1:4,11:14:11.33:285,11,0	0/0:27,0:23:63.21:0,63,1650	0/0:12,0:12:30.06:0,30,588	0/0:6,0:4:9.03:0,9,201	0/0:5,0:5:15.05:0,15,460	0/0:6,0:4:9.03:0,9,178	0/0:7,0:7:18.06:0,18,485	0/0:16,0:15:42.13:0,42,874	0/0:18,0:14:39.13:0,39,1010	0/0:11,0:11:24.06:0,24,521	0/0:19,0:15:38.03:0,38,989
chr10	86708591	.	CTT	C	1618.15	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.359;DP=632;FS=1.004;HRun=13;HaplotypeScore=83.6145;InbreedingCoeff=0.9217;MQ=68.09;MQ0=0;MQRankSum=0.605;QD=19.50;ReadPosRankSum=4.164;VQSLOD=3.2919;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:40:99:0,105,1321	1/1:2,4:6:9:87,9,0	0/0:11,0:11:20.72:0,21,196	0/0:8,0:7:4.53:0,5,42	0/0:26,0:28:70.89:0,71,872	0/0:18,0:19:41.63:0,42,572	0/0:27,0:28:71.67:0,72,950	0/0:25,0:33:63.12:0,63,717	0/0:19,1:20:16.01:0,16,523	1/1:8,21:29:65.80:623,66,0	1/1:5,14:19:38.98:371,39,0	0/0:24,0:25:71.70:0,72,967	0/0:17,0:20:52.98:0,53,613	0/0:19,0:20:47.10:0,47,572	0/0:20,0:22:62.68:0,63,843	0/0:20,0:22:56.65:0,57,739	1/1:1,26:29:74.57:693,75,0	0/0:8,0:20:36.92:0,37,367	0/0:27,0:34:61.54:0,62,854	0/0:26,1:28:40.06:0,40,838	0/0:18,0:19:50.65:0,51,682	0/0:25,0:26:63.17:0,63,841	0/0:17,0:18:50.60:0,51,612	0/0:15,0:18:44.10:0,44,548	0/0:18,0:19:51.10:0,51,661	0/0:34,0:34:77.69:0,78,1045	0/0:18,0:20:56.15:0,56,731	0/0:13,0:15:7.54:0,8,370
chr10	86709514	.	TCACAGACAGACAGGTTGCC	T	6323.85	PASS	AB=0.960;AC=9;AF=0.161;AN=56;BaseQRankSum=11.089;DP=676;FS=1.970;HRun=0;HaplotypeScore=334.7725;InbreedingCoeff=0.8520;MQ=84.14;MQ0=0;MQRankSum=-9.236;QD=72.69;ReadPosRankSum=2.438;VQSLOD=3.7255;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,7920	1/1:2,4:6:9.50:495,10,0	0/0:21,0:21:57.20:0,57,3545	0/0:21,0:21:57.20:0,57,3403	0/0:19,0:19:54.19:0,54,3949	0/0:15,0:15:45.15:0,45,3625	0/0:30,0:30:87.30:0,87,6569	0/0:27,0:27:81.28:0,81,5795	0/0:33,0:33:96.33:0,96,8363	1/1:4,23:27:63.22:3252,63,0	1/1:3,10:13:23.40:721,23,0	0/0:36,0:36:99:0,105,8097	0/0:19,0:19:57.18:0,57,4429	0/0:34,0:34:99:0,102,8851	0/0:22,0:22:66.21:0,66,5222	0/0:26,0:26:78.27:0,78,6768	1/1:4,13:17:36.12:1763,36,0	0/0:24,0:24:72.25:0,72,5673	0/0:29,0:29:84.27:0,84,5606	0/0:19,0:19:57.18:0,57,4567	0/0:58,0:58:99:0,175,14085	0/0:14,0:14:42.14:0,42,2995	0/0:18,0:18:51.18:0,51,3858	0/0:39,0:39:99:0,111,9232	0/0:22,0:22:63.22:0,63,4872	0/1:23,1:24:92.49:92,0,4947	0/0:18,0:18:54.19:0,54,4605	0/0:10,0:10:27.09:0,27,2426
chr10	86710422	.	AGGG	A	3542.25	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.169;DP=632;FS=0.000;HRun=5;HaplotypeScore=88.5415;InbreedingCoeff=0.9971;MQ=77.76;MQ0=0;MQRankSum=-2.694;QD=37.68;ReadPosRankSum=1.389;VQSLOD=1.9715;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,114,2482	1/1:0,12:12:36.12:601,36,0	0/0:22,0:22:57.14:0,57,1175	0/0:12,0:12:36.12:0,36,811	0/0:7,0:7:18.06:0,18,390	0/0:25,0:25:72.25:0,72,1656	0/0:16,0:16:45.15:0,45,1016	0/0:20,0:20:60.20:0,60,1308	0/0:26,0:26:78.25:0,78,1690	1/1:1,22:23:69.18:1116,69,0	1/1:2,29:31:54.14:873,54,0	0/0:24,0:25:72.24:0,72,1616	0/0:16,0:16:48.16:0,48,1044	0/0:23,0:23:69.24:0,69,1545	0/0:24,0:24:66.23:0,66,1523	0/0:22,0:22:60.19:0,60,1283	1/1:3,25:28:57.19:952,57,0	0/0:23,0:23:66.19:0,66,1453	0/0:19,0:19:48.14:0,48,983	0/0:16,0:16:48.15:0,48,1064	0/0:42,0:42:99:0,120,2744	0/0:23,0:23:66.23:0,66,1501	0/0:23,0:23:69.23:0,69,1538	0/0:24,0:24:69.24:0,69,1567	0/0:18,0:18:51.17:0,51,1116	0/0:30,0:30:87.30:0,87,1964	0/0:31,0:31:90.24:0,90,1976	0/0:8,0:8:24.08:0,24,553
chr10	86710945	.	TTTTG	T	3913.80	PASS	AB=0.528;AC=7;AF=0.125;AN=56;BaseQRankSum=13.588;DP=768;FS=5.392;HRun=0;HaplotypeScore=129.3285;InbreedingCoeff=0.8368;MQ=67.65;MQ0=1;MQRankSum=-0.669;QD=32.89;ReadPosRankSum=2.024;VQSLOD=3.7649;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,117,2730	0/1:2,17:19:25.68:694,0,26	0/0:31,0:26:36.42:0,36,911	0/0:22,0:18:35.81:0,36,774	0/0:19,0:19:36.12:0,36,878	0/0:20,0:20:54.19:0,54,1254	0/0:26,0:26:69.22:0,69,1588	0/0:32,0:32:57.17:0,57,1236	0/0:22,0:22:60.21:0,60,1396	1/1:7,34:40:96.32:1544,96,0	1/1:6,15:21:36.04:535,36,0	0/0:28,0:28:81.26:0,81,1847	0/0:27,0:27:69.24:0,69,1669	0/0:27,0:27:66.23:0,66,1600	0/0:21,0:21:60.21:0,60,1409	0/0:29,1:30:28.68:0,29,1695	1/1:5,33:38:69.24:1140,69,0	0/0:30,0:30:72.25:0,72,1695	0/0:21,0:21:42.13:0,42,937	0/0:32,0:31:75.24:0,75,1766	0/0:26,0:26:54.15:0,54,1189	0/0:23,0:23:54.18:0,54,1297	0/0:27,0:27:60.20:0,60,1415	0/0:37,0:37:99:0,105,2523	0/0:25,0:25:51.17:0,51,1246	0/0:31,0:31:84.28:0,84,1922	0/0:32,0:32:72.25:0,72,1764	0/0:14,0:14:36.12:0,36,870
chr10	86713390	.	A	AAAC	2271.30	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.094;DP=600;FS=2.263;HRun=0;HaplotypeScore=123.3035;InbreedingCoeff=0.9563;MQ=57.88;MQ0=30;MQRankSum=-8.603;QD=27.04;ReadPosRankSum=0.039;VQSLOD=3.8945;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.06:0,87,1127	1/1:1,4:8:20.72:255,21,0	0/0:75,0:15:18.75:0,19,155	0/0:80,0:18:10.09:0,10,70	0/0:25,0:25:65.81:0,66,598	0/0:11,0:11:26.89:0,27,296	0/0:9,0:9:9.51:0,10,220	0/0:20,0:20:59.26:0,59,621	0/0:12,0:12:32.47:0,32,300	1/1:30,7:36:27.02:828,27,0	1/1:10,14:24:58.69:823,59,0	0/0:13,0:13:36.07:0,36,424	0/0:9,0:9:14.44:0,14,128	0/0:9,0:8:24.06:0,24,294	0/0:17,0:17:41.75:0,42,439	0/0:12,0:12:29.26:0,29,316	1/1:6,4:13:34.79:525,35,0	0/0:6,0:6:17.68:0,18,186	0/0:22,0:21:56.45:0,56,589	0/0:19,0:19:57.06:0,57,790	0/0:14,0:13:32.68:0,33,391	0/0:14,0:14:35.96:0,36,424	0/0:21,0:21:56.83:0,57,569	0/0:15,0:13:32.97:0,33,425	0/0:21,0:20:53.07:0,53,601	0/0:20,0:20:14.85:0,15,563	0/0:23,0:23:65.86:0,66,845	0/0:14,0:11:26.74:0,27,286
chr10	86713403	.	C	CA	1946.70	PASS	AB=0.956;AC=13;AF=0.232;AN=56;BaseQRankSum=11.518;DP=539;FS=5.144;HRun=9;HaplotypeScore=118.3626;InbreedingCoeff=0.6943;MQ=61.27;MQ0=15;MQRankSum=-10.547;QD=8.65;ReadPosRankSum=-2.203;VQSLOD=1.7402;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:74.96:0,75,650	1/1:4,4:8:18.02:186,18,0	0/1:49,0:18:52.18:86,0,52	0/1:60,0:16:0.43:18,0,0	0/0:26,1:26:26.73:0,27,451	0/0:10,0:10:23.97:0,24,204	0/0:10,0:10:23.99:0,24,208	0/0:17,0:17:44.17:0,44,375	0/0:11,0:11:24.61:0,25,197	1/1:11,22:32:69.62:747,70,0	1/1:5,26:31:72.15:771,72,0	0/0:11,0:11:22.23:0,22,184	0/0:11,0:11:11.93:0,12,104	0/0:12,0:11:29.95:0,30,253	0/0:14,0:14:22.76:0,23,223	0/0:8,0:8:24:0,24,208	1/1:8,6:14:1.87:213,2,0	1/1:3,0:8:15.09:73,15,0	0/0:19,0:19:47.13:0,47,396	0/0:20,0:20:53.98:0,54,469	0/0:10,0:10:29.99:0,30,260	0/0:15,0:15:29.84:0,30,249	0/0:17,1:18:17.54:0,18,365	0/0:13,0:12:26.88:0,27,222	0/0:22,0:22:53.75:0,54,447	0/1:17,2:19:27.33:27,0,247	0/0:22,0:22:59.97:0,60,520	0/0:11,0:11:23.83:0,24,208
chr10	86713431	.	TA	T	1804.24	PASS	AB=0.938;AC=12;AF=0.214;AN=56;BaseQRankSum=12.856;DP=551;FS=9.269;HRun=10;HaplotypeScore=134.0213;InbreedingCoeff=0.7738;MQ=77.32;MQ0=5;MQRankSum=-11.733;QD=11.21;ReadPosRankSum=2.766;VQSLOD=1.8179;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:59.04:0,59,858	1/1:1,8:9:23.99:206,24,0	0/0:43,1:29:25.77:0,26,326	0/1:46,0:24:11.67:12,0,133	0/0:33,0:33:84.09:0,84,890	0/0:12,0:12:36.10:0,36,398	0/0:12,0:13:29.75:0,30,293	0/0:17,0:17:32.87:0,33,338	0/0:14,0:14:39.04:0,39,406	1/1:2,25:27:71.97:621,72,0	1/1:3,24:27:69.46:599,69,0	0/0:12,0:12:30.08:0,30,331	0/0:8,0:8:12.02:0,12,126	0/0:13,0:13:33.09:0,33,365	0/0:15,0:15:27.05:0,27,282	0/0:12,0:12:27.07:0,27,299	1/1:2,14:15:35.98:313,36,0	1/1:1,13:14:23.99:208,24,0	0/0:23,2:25:8.13:0,8,545	0/0:24,0:24:69.19:0,69,763	0/0:8,0:8:24.06:0,24,258	0/0:15,0:15:39.11:0,39,431	0/0:18,0:19:50.99:0,51,531	0/0:12,0:12:30.08:0,30,332	0/0:24,0:24:63.08:0,63,670	0/1:18,3:21:26.93:27,0,403	0/0:24,0:24:46.63:0,47,728	0/0:14,0:14:39.11:0,39,431
chr10	86713448	.	CAACAAACAAACCCTCAAACCAA	C	9016.64	PASS	AB=0.957;AC=9;AF=0.161;AN=56;BaseQRankSum=11.390;DP=550;FS=2.390;HRun=0;HaplotypeScore=318.6794;InbreedingCoeff=0.8517;MQ=77.96;MQ0=4;MQRankSum=-11.852;QD=98.01;ReadPosRankSum=5.098;VQSLOD=4.1534;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:81.28:0,81,6018	1/1:2,6:8:24.08:1282,24,0	0/0:43,0:26:34.06:0,34,1212	0/0:55,0:36:68.10:0,68,2268	0/0:32,0:32:87.30:0,87,7905	0/0:16,0:16:39.13:0,39,2938	0/0:11,0:11:30.10:0,30,1998	0/0:18,0:18:51.16:0,51,2622	0/0:13,0:13:39.13:0,39,3299	1/1:14,10:24:51.17:2559,51,0	1/1:7,16:23:60.21:3119,60,0	0/0:13,0:13:36.12:0,36,3301	0/0:6,0:6:9.03:0,9,796	0/0:12,0:12:36.12:0,36,3143	0/0:11,0:11:27.09:0,27,2089	0/0:11,0:11:27.09:0,27,2360	1/1:5,10:14:36.12:1828,36,0	0/0:14,0:14:27.09:0,27,2365	0/0:24,0:24:60.21:0,60,4382	0/0:23,0:23:63.22:0,63,5300	0/0:12,0:12:30.10:0,30,2618	0/0:14,0:14:33.11:0,33,2878	0/0:22,0:22:66.23:0,66,5704	0/0:11,0:11:21.07:0,21,1892	0/0:22,0:22:63.21:0,63,5569	0/1:21,1:22:99:229,0,4782	0/0:25,0:25:63.20:0,63,5434	0/0:17,0:17:45.15:0,45,3952
chr10	86713458	.	ACCCT	A	2052.92	PASS	AB=0.957;AC=9;AF=0.161;AN=56;BaseQRankSum=13.008;DP=553;FS=3.712;HRun=0;HaplotypeScore=153.3730;InbreedingCoeff=0.8593;MQ=76.66;MQ0=6;MQRankSum=-11.724;QD=20.53;ReadPosRankSum=2.018;VQSLOD=3.1927;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.30:0,87,2395	1/1:7,2:9:27.05:307,27,0	0/0:39,0:20:37.41:0,37,635	0/0:57,0:38:72.62:0,73,1288	0/0:32,0:32:96.33:0,96,2651	0/0:15,0:15:45.15:0,45,1199	0/0:13,0:13:39.13:0,39,1076	0/0:19,0:19:54.17:0,54,1448	0/0:13,0:13:39.13:0,39,1056	1/1:19,7:27:63.12:789,63,0	1/1:21,4:25:66.13:697,66,0	0/0:13,0:13:39.13:0,39,1073	0/0:6,0:6:11.91:0,12,323	0/0:13,0:13:39.13:0,39,1057	0/0:13,0:13:33.11:0,33,844	0/0:10,0:10:30.10:0,30,832	1/1:16,1:16:36.07:404,36,0	0/0:14,0:14:27.09:0,27,755	0/0:24,0:24:69.24:0,69,1880	0/0:22,0:22:66.23:0,66,1836	0/0:11,0:11:30.10:0,30,837	0/0:12,0:12:33.11:0,33,914	0/0:25,0:25:75.26:0,75,2058	0/0:8,0:8:21.07:0,21,571	0/0:21,0:21:63.22:0,63,1731	0/1:21,1:22:21.29:21,0,1506	0/0:25,0:25:72.23:0,72,1937	0/0:16,0:16:45.15:0,45,1258
chr10	86713459	.	CCCT	C	1589.42	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.799;DP=543;FS=5.395;HRun=0;HaplotypeScore=140.1820;InbreedingCoeff=0.9732;MQ=76.59;MQ0=7;MQRankSum=-12.058;QD=23.37;ReadPosRankSum=2.775;VQSLOD=3.2266;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.30:0,87,2050	1/1:8,1:9:26.88:245,27,0	0/0:40,0:19:38.17:0,38,557	0/0:57,0:39:81.13:0,81,1368	0/0:32,0:32:96.33:0,96,2267	0/0:15,0:15:45.14:0,45,1018	0/0:14,0:14:39.13:0,39,920	0/0:19,0:19:51.18:0,51,1213	0/0:13,0:13:39.12:0,39,876	1/1:18,4:22:62.85:652,63,0	1/1:20,3:23:65.62:550,66,0	0/0:13,0:13:39.13:0,39,921	0/0:6,0:6:11.99:0,12,279	0/0:13,0:13:39.13:0,39,915	0/0:13,0:13:33.09:0,33,688	0/0:10,0:10:30.10:0,30,702	1/1:11,2:14:35.81:303,36,0	0/0:14,0:14:27.09:0,27,638	0/0:23,0:23:69.24:0,69,1599	0/0:22,0:22:66.23:0,66,1560	0/0:12,0:12:36.12:0,36,823	0/0:11,0:11:33.11:0,33,760	0/0:25,0:25:75.26:0,75,1725	0/0:8,0:8:21.07:0,21,469	0/0:22,0:22:66.23:0,66,1520	0/0:21,0:21:8.95:0,9,1272	0/0:24,0:24:69.24:0,69,1630	0/0:16,0:16:45.15:0,45,1063
chr10	86713468	.	CAA	C	1075.60	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.530;DP=549;FS=0.508;HRun=4;HaplotypeScore=129.7517;InbreedingCoeff=0.9865;MQ=73.57;MQ0=6;MQRankSum=-10.341;QD=14.34;ReadPosRankSum=2.745;VQSLOD=0.1480;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.26:0,75,1337	1/1:8,1:9:22.36:157,22,0	0/0:41,0:20:47.62:0,48,712	0/0:53,0:37:38.22:0,38,947	0/0:31,0:31:93.28:0,93,1688	0/0:14,0:14:42.14:0,42,755	0/0:13,0:13:39.13:0,39,687	0/0:20,0:20:57.20:0,57,1037	0/0:12,0:12:36.12:0,36,656	1/1:20,4:24:18.99:358,19,0	1/1:21,4:25:44.46:410,44,0	0/0:12,0:12:36.12:0,36,675	0/0:5,0:5:12.04:0,12,220	0/0:13,0:13:39.13:0,39,720	0/0:11,0:11:30.10:0,30,562	0/0:10,0:10:30.09:0,30,521	1/1:12,5:16:21.60:310,22,0	0/0:18,0:18:34.32:0,34,585	0/0:22,0:22:63.20:0,63,1116	0/0:22,0:22:66.23:0,66,1224	0/0:14,0:14:28.76:0,29,706	0/0:12,0:12:36.12:0,36,653	0/0:26,0:26:78.27:0,78,1428	0/0:10,0:10:24.08:0,24,449	0/0:20,0:20:60.21:0,60,1124	0/0:24,0:24:47.33:0,47,1083	0/0:22,0:22:66.22:0,66,1193	0/0:20,0:20:57.19:0,57,986
chr10	86713470	.	A	AACC	666.68	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.760;DP=556;FS=5.136;HRun=0;HaplotypeScore=144.8326;InbreedingCoeff=0.8501;MQ=74.87;MQ0=6;MQRankSum=-5.655;QD=8.55;ReadPosRankSum=-3.574;VQSLOD=2.3909;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.22:0,75,1224	1/1:9,0:9:1.30:37,1,0	0/0:44,0:22:37.71:0,38,582	0/0:53,0:36:42.96:0,43,942	0/0:31,0:31:90.31:0,90,1571	0/0:14,0:14:42.14:0,42,729	0/0:13,0:13:39.06:0,39,636	0/0:20,0:20:57.18:0,57,948	0/0:12,0:12:36.12:0,36,633	1/1:22,2:25:10.27:287,10,0	1/1:24,0:25:2.69:219,3,0	0/0:12,0:12:36.12:0,36,635	0/0:5,0:5:12.04:0,12,204	0/0:13,0:13:39.13:0,39,680	0/0:11,0:11:30.10:0,30,527	0/0:10,0:10:27.09:0,27,476	1/1:19,0:18:19.14:258,19,0	0/0:19,0:19:34.32:0,34,548	0/0:21,0:21:63.20:0,63,1053	0/0:22,0:22:66.23:0,66,1152	0/0:15,0:15:31.76:0,32,692	0/0:12,0:12:36.12:0,36,626	0/0:26,0:26:78.26:0,78,1338	0/0:10,1:11:27.07:0,27,443	0/0:21,0:21:60.21:0,60,1058	0/0:22,0:22:61.92:0,62,1056	0/0:23,0:23:66.20:0,66,1109	0/0:20,0:20:57.18:0,57,949
chr10	86714034	.	CGGGAGACAGAGGCA	C	4777.93	PASS	AB=0.909;AC=10;AF=0.179;AN=56;BaseQRankSum=10.293;DP=571;FS=4.871;HRun=0;HaplotypeScore=201.6195;InbreedingCoeff=0.7460;MQ=55.35;MQ0=7;MQRankSum=-8.951;QD=58.27;ReadPosRankSum=1.543;VQSLOD=4.4446;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:99:0,99,5794	1/1:0,4:4:12.04:511,12,0	0/0:20,0:8:24.08:0,24,1468	0/0:24,0:16:39.28:0,39,2362	0/0:16,0:16:36.06:0,36,1743	0/0:17,0:16:51.18:0,51,2976	0/0:13,0:13:39.13:0,39,2638	0/0:26,0:26:72.24:0,72,4314	0/0:26,0:26:69.21:0,69,4319	1/1:1,18:19:54.13:1929,54,0	1/1:1,9:10:24.08:1016,24,0	0/0:19,0:19:54.10:0,54,3186	0/0:18,0:18:51.16:0,51,3291	0/0:20,0:20:51.18:0,51,3564	0/0:24,0:24:69.24:0,69,4533	0/0:23,0:23:66.20:0,66,4291	1/1:0,18:18:27.09:1150,27,0	0/0:19,0:19:57.20:0,57,3983	0/0:24,0:21:60.20:0,60,3648	0/0:19,0:18:36.14:0,36,2302	0/0:39,0:39:99:0,111,6502	0/1:5,1:6:99:116,0,564	0/0:11,0:11:21.06:0,21,1136	0/0:33,0:33:99:0,99,5719	0/0:23,0:23:69.23:0,69,4022	0/1:24,1:25:55.51:56,0,4132	0/0:26,0:26:69.11:0,69,4148	0/0:10,0:10:30.10:0,30,2038
chr10	86714304	.	A	ACC	606.53	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.069;DP=503;FS=0.000;HRun=5;HaplotypeScore=69.9807;InbreedingCoeff=0.9011;MQ=75.22;MQ0=0;MQRankSum=-2.248;QD=30.33;ReadPosRankSum=1.400;VQSLOD=2.9607;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.19:0,66,825	0/0:10,0:10:24.07:0,24,302	0/0:33,0:24:51.05:0,51,625	0/0:23,0:20:37.62:0,38,430	0/0:11,0:11:27.09:0,27,344	0/0:11,0:11:33.11:0,33,421	0/0:22,0:22:57.18:0,57,725	0/0:22,0:22:60.15:0,60,737	0/0:26,0:26:63.19:0,63,788	0/0:21,0:21:60.19:0,60,762	0/0:15,0:15:42.10:0,42,516	0/0:19,0:19:45.10:0,45,554	0/0:13,0:13:36.10:0,36,443	0/0:14,0:14:42.13:0,42,535	0/0:18,0:18:42.13:0,42,535	0/0:18,0:18:48.15:0,48,612	0/0:30,1:32:32.82:0,33,977	1/1:3,16:20:7.44:688,7,0	0/0:22,0:22:45.13:0,45,564	0/0:10,0:10:27.08:0,27,344	0/0:28,0:28:78.25:0,78,992	0/0:9,0:9:21.06:0,21,265	0/0:7,0:7:21.07:0,21,267	0/0:17,0:17:39.12:0,39,490	0/0:11,0:11:30.10:0,30,382	0/0:17,0:17:48.14:0,48,597	0/0:16,0:16:42.13:0,42,535	0/0:13,0:13:39.12:0,39,497
chr10	86714559	.	TTC	T	646.61	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=3.846;DP=278;FS=0.852;HRun=0;HaplotypeScore=40.0918;InbreedingCoeff=0.7834;MQ=77.36;MQ0=8;MQRankSum=-2.774;QD=19.59;ReadPosRankSum=-0.088;VQSLOD=2.8045;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.10:0,69,1045	1/1:0,6:6:6.02:96,6,0	0/0:43,0:19:15.27:0,15,361	0/0:34,0:14:15.25:0,15,263	0/0:6,0:5:14.91:0,15,182	0/0:2,0:2:2.97:0,3,20	0/0:10,0:10:30.05:0,30,463	0/0:13,0:12:33.09:0,33,523	0/0:6,0:6:18.02:0,18,290	1/1:1,10:11:24.02:273,24,0	1/1:0,4:4:3.01:43,3,0	0/0:7,0:7:18.03:0,18,268	0/0:8,0:8:18:0,18,259	0/0:3,0:3:9.03:0,9,155	0/0:5,0:5:15.05:0,15,297	0/0:8,0:7:21.06:0,21,367	1/1:5,5:10:29.97:376,30,0	1/1:2,0:2:1.25:3,1,0	0/0:7,0:7:21.04:0,21,328	0/0:4,0:4:12.04:0,12,221	0/0:12,0:12:30.04:0,30,452	0/0:11,0:11:27.01:0,27,440	0/0:5,0:5:11.97:0,12,191	0/0:6,0:6:15.04:0,15,246	0/0:6,0:6:15.04:0,15,235	0/0:6,0:6:18.05:0,18,295	0/0:8,0:8:18.06:0,18,355	0/0:9,0:9:24.06:0,24,422
chr10	86714575	.	CCCT	C	163.27	PASS	AC=6;AF=0.120;AN=50;BaseQRankSum=3.566;DP=239;FS=10.433;HRun=0;HaplotypeScore=34.7337;InbreedingCoeff=0.4614;MQ=68.13;MQ0=17;MQRankSum=-2.818;QD=9.07;ReadPosRankSum=-0.311;VQSLOD=0.5747;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:38.90:0,39,318	./.	0/0:43,0:15:5.33:0,5,240	0/0:30,0:8:15:0,15,222	0/0:8,0:4:6.02:0,6,112	./.	0/0:7,0:7:9.03:0,9,180	0/0:6,0:5:12.02:0,12,205	0/0:5,0:5:6.02:0,6,100	1/1:5,0:5:3.01:37,3,0	./.	0/0:3,0:3:6.02:0,6,126	0/0:6,0:6:8.99:0,9,146	0/0:1,0:1:3.01:0,3,61	0/0:6,0:6:12:0,12,181	0/0:8,0:7:12.04:0,12,240	1/1:5,6:8:18.02:226,18,0	1/1:2,0:2:2.74:12,3,0	0/0:4,0:4:6.01:0,6,90	0/0:5,0:5:12.04:0,12,220	0/0:10,0:10:20.66:0,21,362	0/0:7,0:7:6.02:0,6,109	0/0:2,0:2:3.01:0,3,63	0/0:10,0:10:12.04:0,12,221	0/0:9,0:9:15:0,15,223	0/0:5,0:3:6.02:0,6,101	0/0:10,0:10:16.62:0,17,333	0/0:5,0:5:3.01:0,3,63
chr10	86715070	.	T	TTG	530.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.261;DP=741;FS=5.538;HRun=0;HaplotypeScore=101.2128;InbreedingCoeff=0.9158;MQ=72.46;MQ0=0;MQRankSum=1.365;QD=24.10;ReadPosRankSum=-0.262;VQSLOD=4.0900;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,117,1426	0/0:11,0:11:33.10:0,33,404	0/0:34,0:33:51.16:0,51,616	0/0:42,0:39:46.84:0,47,642	0/0:22,0:22:51.16:0,51,624	0/0:23,0:23:48.09:0,48,561	0/0:33,0:35:77.89:0,78,898	0/0:18,0:18:33.10:0,33,404	0/0:20,0:21:57.01:0,57,673	0/0:29,0:29:60.18:0,60,728	0/0:15,0:15:33.10:0,33,406	0/0:31,0:31:75.22:0,75,910	0/0:24,0:24:60.19:0,60,738	0/0:22,0:22:63.11:0,63,729	0/0:30,0:30:81.21:0,81,966	0/0:33,0:34:84.09:0,84,1009	0/0:42,0:42:96.28:0,96,1166	1/1:9,13:22:8.04:612,8,0	0/0:21,0:21:42.11:0,42,500	0/0:20,0:20:51.11:0,51,598	0/0:49,0:49:99:0,126,1513	0/0:27,0:27:57.14:0,57,684	0/0:14,0:14:33.05:0,33,375	0/0:27,0:27:63.18:0,63,762	0/0:20,0:20:39.09:0,39,464	0/0:28,0:28:69.19:0,69,820	0/0:27,0:27:69.16:0,69,817	0/0:7,0:7:18.06:0,18,222
chr10	86716569	.	T	TAAAAA	4529.06	PASS	AB=0.992;AC=15;AF=0.268;AN=56;BaseQRankSum=12.165;DP=709;FS=61.784;HRun=2;HaplotypeScore=158.1547;InbreedingCoeff=-0.0021;MQ=74.83;MQ0=9;MQRankSum=-13.222;QD=13.89;ReadPosRankSum=-1.979;VQSLOD=-0.6741;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:43:99:350,0,467	0/1:12,0:12:91.63:195,0,92	0/0:44,0:26:45:0,45,547	0/0:52,0:23:41.87:0,42,413	0/0:28,0:28:80.72:0,81,1082	0/0:18,0:18:48.08:0,48,793	0/0:20,0:20:60.09:0,60,850	0/1:47,0:44:99:397,0,608	0/0:25,0:25:75.06:0,75,1023	0/1:26,0:26:99:312,0,223	0/1:17,0:17:84.48:84,0,130	0/0:15,0:15:44.98:0,45,566	0/0:20,0:20:60:0,60,745	0/0:22,0:22:66.01:0,66,850	0/0:28,0:28:78.09:0,78,1214	0/0:21,0:21:63.06:0,63,884	0/1:26,0:26:99:208,0,280	1/1:22,7:29:86.94:1521,87,0	0/1:13,0:13:33.12:33,0,183	0/1:41,0:41:99:385,0,369	0/1:11,0:10:21.93:22,0,164	0/0:29,0:29:86.95:0,87,1192	0/0:18,0:18:54.02:0,54,829	0/0:28,0:28:81.03:0,81,1217	0/0:13,0:13:38.93:0,39,618	0/1:24,0:23:99:313,0,164	0/1:25,0:25:99:340,0,189	1/1:12,0:12:22.43:368,22,0
chr10	86716694	.	A	AAAAAG	1103.09	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=-0.965;DP=545;FS=4.191;HRun=0;HaplotypeScore=108.8056;InbreedingCoeff=0.5738;MQ=61.69;MQ0=15;MQRankSum=0.111;QD=8.82;ReadPosRankSum=1.442;VQSLOD=2.0717;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,16:34:53.92:1172,54,0	0/0:9,0:9:12.04:0,12,214	1/1:24,0:7:4.17:31,4,0	0/1:39,0:13:18.08:18,0,18	0/0:31,0:31:69.07:0,69,991	0/0:11,0:11:21.06:0,21,346	0/0:11,0:11:21.06:0,21,349	0/0:22,0:22:24.94:0,25,328	0/0:18,0:18:30.02:0,30,444	0/0:21,0:21:27.07:0,27,406	0/0:14,0:14:35.53:0,36,534	0/0:25,0:25:42.06:0,42,641	0/0:17,0:17:27.48:0,27,340	0/0:15,0:15:27.06:0,27,392	0/0:18,0:18:39.06:0,39,556	0/0:7,0:7:21.07:0,21,375	0/1:26,0:26:1.35:1,0,480	0/0:33,0:32:42.10:0,42,476	0/0:13,0:13:27.03:0,27,329	0/0:16,0:14:21.02:0,21,312	0/0:16,0:15:42.03:0,42,604	0/0:15,0:15:27.05:0,27,347	0/0:11,0:11:14.99:0,15,205	0/0:19,0:19:42.10:0,42,633	0/0:26,0:25:33.08:0,33,482	0/0:28,0:28:59.80:0,60,885	0/0:18,0:18:39.07:0,39,596	0/0:6,0:6:6.01:0,6,79
chr10	86716697	.	AAG	A	649.07	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=6.759;DP=550;FS=1.580;HRun=0;HaplotypeScore=66.1675;InbreedingCoeff=0.6282;MQ=61.52;MQ0=15;MQRankSum=0.651;QD=9.01;ReadPosRankSum=0.399;VQSLOD=2.9501;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:76.34:0,76,818	0/0:8,0:8:24.05:0,24,342	0/0:27,0:7:9.40:0,9,88	0/1:40,0:14:12.69:13,0,149	0/0:32,0:32:61.13:0,61,1169	0/0:13,0:13:34.37:0,34,458	0/0:12,0:12:29.40:0,29,400	0/0:22,0:22:57.12:0,57,731	0/0:17,0:17:46.50:0,46,657	0/0:24,0:24:69.10:0,69,846	0/0:16,0:16:48.06:0,48,662	0/0:23,0:23:62.82:0,63,844	0/0:17,0:17:45.46:0,45,570	0/0:15,0:15:42.14:0,42,599	0/0:19,0:19:36.89:0,37,677	0/0:7,0:7:21.07:0,21,341	0/0:28,0:28:47.84:0,48,959	1/1:3,29:31:41.12:740,41,0	0/0:14,0:14:42.04:0,42,489	0/0:15,0:13:31.07:0,31,394	0/0:15,0:15:45.10:0,45,634	0/0:15,0:15:45.05:0,45,523	0/0:11,0:11:30:0,30,360	0/0:19,0:19:57.13:0,57,799	0/0:26,0:25:61.61:0,62,799	0/0:27,0:27:77.89:0,78,1048	0/0:15,0:15:45.08:0,45,650	0/0:6,0:6:18.06:0,18,229
chr10	86717165	.	C	CAATG	19275.77	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-13.320;DP=600;FS=16.944;HRun=0;HaplotypeScore=86.0103;InbreedingCoeff=0.9953;MQ=74.82;MQ0=0;MQRankSum=-9.875;QD=72.19;ReadPosRankSum=-0.426;VQSLOD=5.6142;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,32:41:96.29:2620,96,0	1/1:0,8:9:24.04:607,24,0	0/0:20,0:20:42.98:0,43,844	0/0:14,0:14:42.09:0,42,710	0/0:21,0:21:60.19:0,60,1162	0/0:13,0:13:36.12:0,36,719	0/0:31,0:31:90.31:0,90,1797	1/1:8,22:31:84.29:2296,84,0	0/0:34,0:34:99:0,102,2026	1/1:4,21:25:75.26:2059,75,0	1/1:1,10:12:33.11:891,33,0	0/0:20,0:20:60.21:0,60,1198	0/0:20,0:20:54.16:0,54,1040	0/0:19,0:19:48.16:0,48,959	0/0:28,0:28:78.27:0,78,1554	0/0:24,0:24:66.21:0,66,1283	1/1:2,13:15:42.14:1169,42,0	1/1:0,10:11:27.09:755,27,0	1/1:1,14:19:57.18:1406,57,0	1/1:1,17:19:51.18:1396,51,0	1/1:2,16:19:39.13:1089,39,0	0/0:20,0:20:57.20:0,57,1134	0/0:29,0:29:84.27:0,84,1638	0/0:25,0:25:63.34:0,63,1352	0/0:15,0:15:39.13:0,39,775	1/1:4,32:37:99:3060,111,0	1/1:2,20:23:57.20:1593,57,0	1/1:0,4:4:12.04:335,12,0
chr10	86718846	.	A	ACTT	4702.36	PASS	AC=24;AF=0.444;AN=54;BaseQRankSum=7.295;DP=387;FS=3.336;HRun=0;HaplotypeScore=133.8199;InbreedingCoeff=0.9364;MQ=57.81;MQ0=18;MQRankSum=-8.348;QD=36.74;ReadPosRankSum=-4.991;VQSLOD=4.3457;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:33.03:476,33,0	1/1:3,0:3:9.03:140,9,0	0/0:38,0:12:30.44:0,30,346	0/0:28,0:9:2.19:0,2,48	0/0:33,0:33:93.29:0,93,1403	0/0:21,0:20:51.16:0,51,795	0/0:13,0:12:39.13:0,39,571	1/1:14,3:18:51.11:852,51,0	0/0:11,0:10:27.08:0,27,395	1/1:14,0:12:36.10:566,36,0	1/1:10,0:10:26.94:321,27,0	0/0:6,0:6:18.06:0,18,250	0/0:6,0:6:18.06:0,18,317	0/0:15,0:14:39.06:0,39,550	0/0:8,0:8:24.03:0,24,306	0/0:13,0:13:33.11:0,33,504	1/1:10,0:10:21:280,21,0	1/1:6,0:5:9.03:151,9,0	1/1:7,0:7:18.04:300,18,0	1/1:19,0:18:54.05:721,54,0	1/1:5,0:4:8.84:58,9,0	0/0:9,0:9:21.04:0,21,311	0/0:10,0:10:27.09:0,27,458	0/0:13,0:13:33.11:0,33,502	0/0:35,0:35:99:0,102,1569	1/1:9,1:13:39.13:640,39,0	1/1:6,0:4:12.04:197,12,0	./.
chr10	86720583	.	C	CT	2177.06	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.073;DP=670;FS=19.656;HRun=0;HaplotypeScore=65.3636;InbreedingCoeff=0.9837;MQ=89.81;MQ0=0;MQRankSum=-4.877;QD=35.11;ReadPosRankSum=2.383;VQSLOD=2.0895;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,46:47:99:1725,108,0	0/0:5,0:5:15.01:0,15,187	0/0:28,0:28:74.20:0,74,951	0/0:28,0:28:78.64:0,79,956	0/0:24,0:24:69.22:0,69,944	0/0:24,0:24:72.23:0,72,987	0/0:25,0:25:75.23:0,75,1024	0/0:26,0:26:78.22:0,78,1064	0/0:29,0:29:87.29:0,87,1210	0/0:21,0:21:60.20:0,60,837	0/0:15,0:15:45.10:0,45,585	0/0:23,0:23:68.53:0,69,873	0/0:20,0:20:60.14:0,60,796	0/0:21,0:21:63.16:0,63,836	0/0:17,0:17:48.15:0,48,654	0/0:17,0:17:51.15:0,51,679	0/0:37,0:37:99:0,105,1379	1/1:0,15:15:36.12:574,36,0	0/0:25,0:25:72.02:0,72,943	0/0:22,0:22:66.22:0,66,919	0/0:38,0:38:99:0,105,1407	0/0:22,0:22:63.21:0,63,879	0/0:17,0:17:45.11:0,45,605	0/0:30,0:30:87.22:0,87,1157	0/0:24,0:24:69.15:0,69,906	0/0:34,0:34:90.21:0,90,1180	0/0:30,0:30:87.28:0,87,1194	0/0:5,0:5:15.05:0,15,209
chr10	86723389	.	GT	G	1584.92	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.897;DP=491;FS=3.727;HRun=1;HaplotypeScore=60.0099;InbreedingCoeff=0.9163;MQ=69.36;MQ0=1;MQRankSum=-0.986;QD=31.70;ReadPosRankSum=1.099;VQSLOD=3.3297;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:57.19:786,57,0	0/0:4,0:4:12.04:0,12,169	0/0:12,0:10:19.40:0,19,254	0/0:8,0:7:17.23:0,17,178	0/0:10,0:10:30.10:0,30,415	0/0:14,0:14:42.14:0,42,596	0/0:37,0:37:99:0,111,1431	0/0:16,0:16:48.08:0,48,567	0/0:19,0:19:57.17:0,57,792	0/0:17,0:17:48.13:0,48,628	0/0:5,0:5:15.05:0,15,213	0/0:20,0:20:60.13:0,60,790	0/0:25,0:25:75.19:0,75,1007	0/0:15,0:15:39.12:0,39,555	0/0:29,0:29:86.23:0,86,1126	0/0:12,0:12:36.09:0,36,491	0/0:32,0:32:87.17:0,87,1139	1/1:0,25:25:66.22:920,66,0	0/0:14,0:14:42.11:0,42,539	0/0:4,0:4:12.03:0,12,153	0/0:58,0:58:99:0,172,2272	0/0:8,0:8:21.02:0,21,228	0/0:6,0:6:8.05:0,8,205	0/0:29,0:29:84.18:0,84,1084	0/0:9,0:9:27.09:0,27,385	0/0:7,0:7:21.06:0,21,284	0/0:22,0:22:62.21:0,62,836	0/0:9,0:9:27.09:0,27,383
chr10	86723681	.	AAC	A	6748.13	PASS	AB=0.941;AC=27;AF=0.482;AN=56;BaseQRankSum=9.882;DP=651;FS=2.616;HRun=0;HaplotypeScore=87.6081;InbreedingCoeff=0.9107;MQ=72.72;MQ0=5;MQRankSum=-0.906;QD=24.99;ReadPosRankSum=1.648;VQSLOD=5.4348;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,44:55:99:1353,111,0	1/1:1,12:13:36.11:446,36,0	0/0:54,0:39:46.29:0,46,872	0/0:63,0:33:35.76:0,36,729	0/1:30,2:32:2.17:2,0,982	0/0:23,0:23:48.15:0,48,758	0/0:31,1:32:47.08:0,47,1285	1/1:5,12:17:36.11:446,36,0	0/0:18,0:18:51.17:0,51,834	1/1:4,27:31:81.25:1004,81,0	1/1:3,16:19:45.14:558,45,0	0/0:17,0:18:45.15:0,45,737	0/0:19,0:19:57.19:0,57,934	0/0:25,2:27:3.86:0,4,1098	0/0:26,0:26:63.21:0,63,1021	0/0:19,1:20:16.98:0,17,799	1/1:4,23:27:66.21:818,66,0	1/1:5,19:24:51.16:632,51,0	1/1:8,7:15:21.07:260,21,0	1/1:1,2:3:9.03:112,9,0	1/1:1,3:4:9.03:112,9,0	0/0:26,1:27:32.07:0,32,1045	0/0:13,0:13:30.09:0,30,467	0/0:22,1:23:16.98:0,17,796	0/0:16,0:16:36.12:0,36,586	1/1:1,9:10:27.08:335,27,0	1/1:0,15:15:42.13:520,42,0	1/1:0,4:4:12.04:149,12,0
chr10	86728074	.	A	AG	331.71	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.750;DP=641;FS=3.261;HRun=1;HaplotypeScore=69.6865;InbreedingCoeff=0.9000;MQ=57.24;MQ0=30;MQRankSum=-1.268;QD=13.27;ReadPosRankSum=2.482;VQSLOD=2.8364;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:83.72:0,84,1005	0/0:10,0:9:20.24:0,20,310	0/0:57,0:12:7.65:0,8,213	0/0:47,0:12:16.82:0,17,105	0/0:24,0:22:47.95:0,48,576	0/0:11,0:10:17.61:0,18,211	0/0:26,0:26:39.49:0,39,726	0/0:24,0:23:60.49:0,60,668	0/0:13,0:13:35.87:0,36,380	0/0:29,0:29:69.23:0,69,844	0/0:19,0:19:39.79:0,40,545	0/0:21,0:19:54.02:0,54,589	0/0:16,0:16:39.09:0,39,465	0/0:16,0:14:35.52:0,36,388	0/0:15,0:15:41.96:0,42,483	0/0:21,0:20:57.12:0,57,733	0/0:39,0:38:95.60:0,96,1016	1/1:3,22:24:35.99:426,36,0	0/0:22,0:19:50:0,50,484	0/0:15,0:14:39.01:0,39,438	0/0:13,0:12:36.07:0,36,413	0/0:18,0:18:41.92:0,42,479	0/0:17,0:16:44.44:0,44,481	0/0:30,0:28:76.65:0,77,893	0/0:26,0:25:59.84:0,60,691	0/0:28,0:28:73.46:0,73,894	0/0:17,0:16:34.13:0,34,460	0/0:8,0:8:17.66:0,18,232
chr10	86729841	.	C	CATTT	12735.74	PASS	AB=0.537;AC=15;AF=0.268;AN=56;BaseQRankSum=-14.538;DP=808;FS=0.311;HRun=0;HaplotypeScore=124.4570;InbreedingCoeff=0.9021;MQ=83.02;MQ0=0;MQRankSum=-7.327;QD=65.31;ReadPosRankSum=-3.990;VQSLOD=5.3645;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:70,0:70:99:0,187,3428	0/0:7,0:7:18.06:0,18,336	0/0:23,0:23:59.94:0,60,1055	0/0:28,0:28:54.96:0,55,1200	0/0:21,0:21:60.19:0,60,1088	0/0:20,0:20:60.19:0,60,1079	0/0:34,0:34:90.29:0,90,1649	1/1:7,23:31:84.27:2090,84,0	0/0:36,0:36:99:0,99,1771	0/0:45,0:45:99:0,132,2345	0/0:14,0:14:42.14:0,42,784	0/0:31,0:31:84.27:0,84,1522	0/0:36,0:36:99:0,102,1896	0/0:38,0:38:99:0,108,1985	0/0:31,0:31:84.29:0,84,1568	0/0:33,0:33:90.29:0,90,1642	0/0:35,0:35:99:0,105,1923	1/1:4,13:18:42.14:1117,42,0	1/1:9,23:33:96.27:2237,96,0	1/1:2,25:27:78.27:1892,78,0	1/1:3,20:23:57.19:1393,57,0	0/0:35,0:35:93.28:0,93,1671	0/0:23,0:23:66.23:0,66,1221	0/0:34,0:34:93.32:0,93,1736	0/0:19,0:19:54.19:0,54,1001	0/1:4,23:29:30.81:1800,0,31	1/1:3,22:28:75.26:1887,75,0	1/1:2,4:6:12.04:320,12,0
chr10	86730017	.	AAAGGAAGGAAGGAAGG	A	2003.07	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=8.662;DP=591;FS=13.315;HRun=0;HaplotypeScore=236.4731;InbreedingCoeff=0.7956;MQ=59.37;MQ0=12;MQRankSum=-4.690;QD=6.84;ReadPosRankSum=-0.118;VQSLOD=1.3259;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:49,0:49:19.46:124,19,0	1/1:5,4:9:1.92:121,2,0	0/0:19,0:9:0:0,0,0	0/1:12,0:7:0:0,0,0	0/0:19,0:19:24.05:0,24,995	0/0:15,0:15:30.09:0,30,1064	0/0:29,0:28:27.08:0,27,701	1/1:22,0:21:1.25:3,1,0	0/0:23,0:23:24.08:0,24,929	1/1:25,0:24:9.03:296,9,0	1/1:3,10:13:8.99:164,9,0	0/0:21,0:20:27.09:0,27,1175	0/0:24,0:24:30.10:0,30,1509	0/0:30,0:30:51.16:0,51,2611	0/0:19,0:19:30.09:0,30,1112	0/0:19,0:19:21.07:0,21,766	1/1:20,7:27:2.98:130,3,0	1/1:15,0:15:5.90:36,6,0	1/1:16,0:23:18.06:282,18,0	1/1:16,0:16:5.96:51,6,0	1/1:32,0:32:8.90:137,9,0	0/0:21,0:20:27.09:0,27,1091	0/0:16,0:18:11.87:0,12,380	0/0:29,0:29:36.12:0,36,1705	0/0:12,0:12:15.05:0,15,574	1/1:13,0:22:27.09:487,27,0	1/1:21,0:21:18.05:222,18,0	1/1:7,0:6:5.85:148,6,0
chr10	86730056	.	GGAA	G	157.31	PASS	AB=0.755;AC=2;AF=0.037;AN=54;BaseQRankSum=5.775;DP=600;FS=2.258;HRun=0;HaplotypeScore=113.7224;InbreedingCoeff=-0.0419;MQ=53.69;MQ0=26;MQRankSum=-4.634;QD=2.62;ReadPosRankSum=3.602;VQSLOD=2.1766;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,21:44:99:174,0,577	0/0:12,0:12:16.21:0,16,249	0/0:15,0:4:8.89:0,9,88	./.	0/0:12,0:11:30.10:0,30,557	0/0:22,0:20:54.17:0,54,804	0/0:30,0:28:81.20:0,81,1076	0/0:16,0:15:45.07:0,45,522	0/0:23,0:22:63.19:0,63,950	0/0:18,0:16:48.15:0,48,637	0/0:16,0:16:39.12:0,39,488	0/0:33,0:32:90.29:0,90,1384	0/0:30,0:30:87.28:0,87,1363	0/0:30,0:30:87.29:0,87,1563	0/0:20,0:20:57.18:0,57,820	0/0:23,0:23:69.21:0,69,968	0/0:18,0:17:17.35:0,17,319	0/1:11,3:14:71.88:72,0,295	0/0:13,0:10:22.23:0,22,221	0/0:15,0:14:37.80:0,38,450	0/0:36,0:36:83.21:0,83,935	0/0:24,0:23:63.19:0,63,926	0/0:16,0:16:42.05:0,42,562	0/0:31,0:31:93.29:0,93,1459	0/0:17,0:17:25.84:0,26,469	0/0:22,0:22:22.29:0,22,485	0/0:24,0:24:55.45:0,55,606	0/0:15,0:13:36.97:0,37,432
chr10	86730059	.	A	AG	746.66	PASS	AB=0.892;AC=7;AF=0.130;AN=54;BaseQRankSum=9.237;DP=598;FS=3.899;HRun=2;HaplotypeScore=92.2606;InbreedingCoeff=-0.1509;MQ=54.01;MQ0=21;MQRankSum=-4.282;QD=4.34;ReadPosRankSum=5.304;VQSLOD=0.9053;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:42:45.16:45,0,581	0/0:13,0:13:19.25:0,19,252	0/0:13,0:4:8.89:0,9,88	./.	0/0:15,0:14:33.09:0,33,396	0/0:22,0:20:54.17:0,54,669	0/0:30,0:28:81.22:0,81,976	0/0:17,0:17:31.91:0,32,536	0/0:22,0:21:54.17:0,54,668	0/0:18,0:16:34.54:0,35,404	0/0:17,0:17:30.69:0,31,349	0/0:33,0:32:90.28:0,90,1113	0/0:30,0:30:84.73:0,85,1040	0/0:30,0:30:84.26:0,84,1040	0/0:20,0:20:54.17:0,54,666	0/0:22,0:22:66.21:0,66,817	0/0:18,0:17:26.02:0,26,266	0/0:12,0:12:11.59:0,12,313	0/1:15,0:12:72.09:223,0,72	0/1:12,3:14:8.79:9,0,326	0/1:26,12:38:48.91:49,0,723	0/0:23,0:22:63.17:0,63,754	0/0:17,0:17:43.68:0,44,513	0/0:30,0:30:90.28:0,90,1114	0/0:17,0:17:51.09:0,51,581	0/1:23,0:23:99:301,0,280	0/1:13,9:22:99:201,0,342	0/1:14,1:13:46.07:46,0,335
chr10	86730506	.	AC	A	2499.51	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.317;DP=753;FS=2.171;HRun=1;HaplotypeScore=75.6938;InbreedingCoeff=0.9977;MQ=77.91;MQ0=0;MQRankSum=0.606;QD=37.87;ReadPosRankSum=-0.450;VQSLOD=3.9748;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.30:0,87,1388	1/1:0,6:6:18.06:252,18,0	0/0:15,0:15:45.13:0,45,670	0/0:23,0:23:53.33:0,53,826	0/0:22,0:22:66.22:0,66,1046	0/0:22,0:22:66.20:0,66,1029	0/0:28,0:28:84.26:0,84,1301	0/0:31,0:31:93.31:0,93,1463	0/0:42,0:42:99:0,126,2006	1/1:0,26:26:78.26:1090,78,0	1/1:0,13:13:38.99:478,39,0	0/0:42,0:42:99:0,126,1935	0/0:39,0:39:99:0,117,1844	0/0:30,0:30:90.29:0,90,1413	0/0:41,0:41:99:0,120,1870	0/0:30,0:30:90.29:0,90,1415	1/1:0,21:21:60.20:839,60,0	0/0:23,0:23:69.24:0,69,1102	0/0:21,0:21:60.14:0,60,864	0/0:16,0:16:42.14:0,42,671	0/0:60,0:60:99:0,178,2754	0/0:19,0:19:57.19:0,57,911	0/0:13,0:13:36.12:0,36,572	0/0:36,0:35:99:0,108,1720	0/0:20,0:20:60.09:0,60,877	0/0:42,0:42:99:0,120,1891	0/0:29,0:28:84.26:0,84,1295	0/0:14,0:14:42.14:0,42,671
chr10	86731002	.	T	TCC	3661.83	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-5.723;DP=710;FS=3.942;HRun=7;HaplotypeScore=89.2381;InbreedingCoeff=0.9997;MQ=85.87;MQ0=0;MQRankSum=-0.991;QD=31.30;ReadPosRankSum=-0.872;VQSLOD=3.5617;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,1:32:35.41:362,35,0	1/1:1,11:12:30.10:492,30,0	0/0:24,0:24:40.87:0,41,635	0/0:24,0:24:57.16:0,57,655	0/0:24,0:24:66.17:0,66,758	0/0:21,0:21:57.12:0,57,633	0/0:33,0:33:81.22:0,81,944	0/0:26,0:26:72.20:0,72,839	0/0:41,0:41:99:0,114,1328	1/1:6,20:26:63.20:988,63,0	1/1:2,18:23:54.17:884,54,0	0/0:15,0:15:42.12:0,42,489	0/0:19,0:19:48.12:0,48,548	0/0:38,0:38:99:0,108,1257	0/0:27,0:27:75.21:0,75,874	0/0:21,0:21:60.16:0,60,689	1/1:4,20:24:57.19:935,57,0	0/0:31,0:31:84.17:0,84,950	0/0:18,0:18:42.10:0,42,481	0/0:25,0:25:66.17:0,66,757	0/0:45,0:45:99:0,117,1352	0/0:26,0:26:78.22:0,78,898	0/0:22,0:22:57.16:0,57,664	0/0:24,0:24:60.16:0,60,699	0/0:13,0:13:30.08:0,30,350	0/0:30,0:30:78.20:0,78,899	0/0:26,0:26:69.20:0,69,804	0/0:20,0:20:48.14:0,48,559
chr10	86731759	.	A	AAAACAAAC	6542.50	PASS	AB=0.684;AC=17;AF=0.304;AN=56;BaseQRankSum=-0.558;DP=560;FS=12.254;HRun=0;HaplotypeScore=137.9551;InbreedingCoeff=0.8777;MQ=54.21;MQ0=6;MQRankSum=-8.518;QD=35.75;ReadPosRankSum=-2.812;VQSLOD=3.2665;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:41:71.64:705,72,0	0/0:16,0:16:30.04:0,30,712	0/0:19,0:12:10.64:0,11,352	0/0:21,0:10:15.04:0,15,321	0/0:22,0:22:44.80:0,45,1052	0/0:24,0:24:30.08:0,30,667	0/0:18,0:18:12.11:0,12,709	1/1:22,0:21:30.07:671,30,0	0/0:10,0:10:15.05:0,15,385	0/0:29,0:29:44.79:0,45,925	0/0:15,0:15:33.03:0,33,733	0/0:22,0:22:54.08:0,54,1135	0/0:12,0:12:30.07:0,30,714	0/0:17,0:17:39.12:0,39,923	0/0:16,0:16:36.01:0,36,653	0/0:32,0:32:81.11:0,81,1799	0/0:29,0:29:66.15:0,66,1469	1/1:8,0:11:8.93:166,9,0	1/1:10,5:13:24.08:820,24,0	1/1:9,12:22:30.05:1040,30,0	1/1:11,5:19:11.97:248,12,0	0/0:15,0:15:29.74:0,30,664	0/0:16,0:16:24.04:0,24,508	0/0:30,0:30:69.23:0,69,1637	0/0:13,0:13:30.08:0,30,669	0/1:14,12:25:99:1179,0,133	1/1:8,12:22:30.10:1216,30,0	1/1:0,5:5:12.04:498,12,0
chr10	86732534	.	CTAA	C	303.40	PASS	AB=0.815;AC=6;AF=0.107;AN=56;BaseQRankSum=4.885;DP=774;FS=2.008;HRun=0;HaplotypeScore=138.0893;InbreedingCoeff=-0.1190;MQ=61.61;MQ0=18;MQRankSum=-2.532;QD=2.73;ReadPosRankSum=-4.042;VQSLOD=1.4686;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,122,2642	0/0:9,0:9:20.80:0,21,307	0/0:51,0:19:14.39:0,14,833	0/0:67,0:29:47.87:0,48,1076	0/0:21,0:21:63.22:0,63,1526	0/0:21,0:21:60.17:0,60,1414	0/0:37,1:38:99:0,105,2537	0/1:19,4:22:99:149,0,1098	0/0:33,0:33:99:0,99,2297	0/0:26,0:25:73:0,73,1422	0/0:16,0:16:21.03:0,21,364	0/0:30,0:30:84.26:0,84,1933	0/0:18,0:18:53.92:0,54,1243	0/0:16,0:16:46.97:0,47,1067	0/0:32,0:32:89.89:0,90,2104	0/0:29,0:29:86.32:0,86,1999	0/0:28,0:28:23.01:0,23,270	0/0:27,0:27:30.08:0,30,458	0/1:13,3:16:70.30:70,0,615	0/1:13,5:19:62.10:62,0,529	0/0:29,5:34:57.99:0,58,1234	0/0:29,0:29:81.27:0,81,1912	0/0:26,0:25:69.24:0,69,1680	0/0:45,0:45:99:0,129,3115	0/0:12,0:12:30.10:0,30,689	0/1:16,3:19:96.08:96,0,1010	0/1:22,3:27:9.39:9,0,1233	0/1:4,2:6:39.29:39,0,228
chr10	86732539	.	CACACACAG	C	3017.93	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=2.978;DP=778;FS=16.669;HRun=0;HaplotypeScore=188.5108;InbreedingCoeff=0.2282;MQ=57.55;MQ0=21;MQRankSum=-4.031;QD=9.17;ReadPosRankSum=-2.496;VQSLOD=1.3798;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:55,0:55:99:362,0,597	1/1:4,6:9:18.02:407,18,0	0/1:50,0:16:11.47:11,0,68	0/0:62,0:22:24.35:0,24,260	0/0:22,0:22:59.95:0,60,1383	0/0:24,0:23:60.11:0,60,1636	0/0:38,0:38:90.20:0,90,2474	0/1:27,0:26:99:205,0,237	0/0:33,0:33:78.13:0,78,2146	1/1:3,20:22:61.60:697,62,0	1/1:3,14:17:9.03:180,9,0	0/0:29,0:29:72.14:0,72,2066	0/0:18,0:18:54.11:0,54,1474	0/0:16,0:16:42.04:0,42,1042	0/0:36,0:36:92.44:0,92,2051	0/0:28,0:28:66.06:0,66,1475	1/1:1,27:28:21.07:514,21,0	0/0:28,0:28:22.76:0,23,115	0/1:14,0:13:68.08:106,0,68	0/1:20,0:19:54.49:100,0,54	0/1:30,0:30:78.18:200,0,78	0/0:30,0:30:77.96:0,78,1971	0/0:27,0:26:65.93:0,66,1497	0/0:47,0:47:99:0,123,3008	0/0:11,0:11:24.06:0,24,763	0/1:21,0:21:99:211,0,111	0/1:28,0:28:99:169,0,420	0/1:6,0:6:36.54:37,0,82
chr10	86732543	.	CACAG	C	2903.66	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=4.292;DP=757;FS=4.832;HRun=0;HaplotypeScore=137.6375;InbreedingCoeff=0.4090;MQ=56.44;MQ0=21;MQRankSum=-4.039;QD=8.47;ReadPosRankSum=-4.000;VQSLOD=1.7489;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:53,0:53:99:378,0,198	1/1:9,0:8:15.04:171,15,0	0/1:46,0:12:11.14:11,0,68	0/0:62,0:21:24.32:0,24,203	0/0:21,0:21:59.92:0,60,895	0/0:24,0:23:52.32:0,52,1029	0/0:36,0:36:93.08:0,93,1513	0/1:23,0:22:99:206,0,122	0/0:29,0:29:78.08:0,78,1319	1/1:22,0:21:61.59:512,62,0	1/1:16,0:16:8.94:84,9,0	0/0:29,0:29:70.75:0,71,1237	0/0:18,0:18:46.92:0,47,855	0/0:16,0:16:22.44:0,22,615	0/0:36,0:36:91.10:0,91,1327	0/0:26,0:26:22.21:0,22,899	1/1:29,0:29:23.94:235,24,0	1/1:0,28:28:24.08:454,24,0	0/1:13,0:12:14.50:134,0,15	0/1:18,0:17:4.70:106,0,5	0/1:30,0:30:5.92:219,0,6	0/0:31,0:31:39.80:0,40,1219	0/0:29,0:28:43.01:0,43,961	0/0:46,0:46:99:0,126,1900	0/0:11,0:11:13.05:0,13,406	1/1:21,0:21:20.59:326,21,0	0/1:29,0:29:99:208,0,104	0/1:6,0:6:21.35:55,0,21
chr10	86732545	.	CAG	C	2921.12	PASS	AB=0.964;AC=28;AF=0.500;AN=56;BaseQRankSum=8.396;DP=762;FS=0.000;HRun=0;HaplotypeScore=114.9030;InbreedingCoeff=0.7532;MQ=57.19;MQ0=21;MQRankSum=-4.346;QD=8.07;ReadPosRankSum=-3.168;VQSLOD=2.8625;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:56,1:57:53.36:509,53,0	1/1:9,0:8:14.83:101,15,0	0/1:45,0:12:10.36:10,0,68	0/0:60,0:19:24.32:0,24,203	0/0:21,0:21:32.56:0,33,641	0/0:25,0:24:29.90:0,30,733	0/0:37,0:37:46.88:0,47,1001	1/1:22,0:21:11.60:275,12,0	0/0:29,0:29:37.86:0,38,886	1/1:22,0:21:61.41:444,61,0	1/1:16,0:16:8.85:56,9,0	0/0:25,4:29:9.33:0,9,865	0/1:18,1:19:15.50:15,0,559	0/0:15,1:16:0.67:0,1,456	0/0:36,0:36:57.13:0,57,946	0/0:28,0:28:41.54:0,42,757	1/1:28,0:28:23.69:159,24,0	1/1:28,0:28:23.94:192,24,0	1/1:13,0:12:8.01:170,8,0	1/1:18,0:17:17.42:126,17,0	1/1:31,0:31:36.93:284,37,0	0/0:32,0:32:44.37:0,44,910	0/0:29,0:28:54.47:0,54,738	0/0:46,0:46:70.38:0,70,1286	0/0:11,0:11:2.94:0,3,240	1/1:20,0:20:52.78:398,53,0	1/1:28,0:28:46.30:334,46,0	1/1:5,0:5:4.01:60,4,0
chr10	86732547	.	GAC	G	574.83	PASS	AB=0.921;AC=21;AF=0.375;AN=56;BaseQRankSum=6.708;DP=783;FS=11.277;HRun=0;HaplotypeScore=127.1035;InbreedingCoeff=-0.1527;MQ=56.56;MQ0=21;MQRankSum=-0.016;QD=1.32;ReadPosRankSum=0.778;VQSLOD=1.6933;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:29.79:0,30,250	1/1:9,0:8:0.04:48,0,0	0/0:45,0:11:3.46:0,3,24	0/0:63,0:19:2.99:0,3,24	0/1:20,1:21:3.57:4,0,364	0/1:23,0:22:3.89:4,0,455	0/1:29,6:36:83.05:83,0,613	0/0:25,0:24:28.31:0,28,169	0/1:24,3:28:47.10:47,0,566	0/1:28,0:27:28.87:29,0,81	1/1:16,0:16:5.02:25,5,0	0/1:27,2:29:51.74:52,0,518	0/1:17,3:20:87.01:87,0,387	0/1:17,0:17:4.71:5,0,333	0/1:31,5:37:52.94:53,0,497	0/1:26,0:28:19.14:19,0,415	1/1:29,0:29:1.03:50,1,0	1/1:28,0:28:21.43:89,21,0	0/0:17,0:16:11.47:0,11,85	0/0:19,0:18:5.21:0,5,48	0/0:33,0:33:4.89:0,5,42	0/0:33,0:33:10.29:0,10,520	0/1:24,3:28:14.70:15,0,354	0/1:40,6:46:99:102,0,700	0/1:9,2:11:18.96:19,0,111	0/0:17,0:18:8.35:0,8,43	0/0:29,0:29:16.81:0,17,105	0/0:6,0:6:3:0,3,26
chr10	86732573	.	C	CAT	403.18	PASS	AB=0.540;AC=1;AF=0.018;AN=56;BaseQRankSum=5.953;DP=746;FS=2.938;HRun=0;HaplotypeScore=125.2324;InbreedingCoeff=0.3215;MQ=59.32;MQ0=13;MQRankSum=0.165;QD=6.61;ReadPosRankSum=0.907;VQSLOD=3.3716;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,49:61:4.93:478,0,5	0/0:10,0:9:23.92:0,24,198	0/0:41,0:18:35.98:0,36,352	0/0:42,0:13:36:0,36,356	0/0:21,0:21:52.18:0,52,570	0/0:21,0:20:57.04:0,57,670	0/0:36,0:36:74.40:0,74,960	0/0:30,0:29:66.72:0,67,491	0/0:24,0:24:45.87:0,46,776	0/0:31,0:30:52.22:0,52,471	0/0:18,0:18:21.44:0,21,174	0/0:30,0:30:69.23:0,69,751	0/0:17,0:17:50.96:0,51,590	0/0:13,0:13:33.52:0,34,413	0/0:29,0:29:46.15:0,46,734	0/0:24,0:24:44.41:0,44,661	0/0:38,0:38:50.40:0,50,414	0/0:27,0:27:44.96:0,45,424	0/0:17,0:16:39.47:0,39,302	0/0:22,0:22:37.87:0,38,276	0/0:33,0:33:26.93:0,27,215	0/0:26,0:26:69.51:0,70,827	0/0:27,0:25:50.96:0,51,551	0/0:38,0:38:99:0,99,1112	0/0:11,0:11:26.98:0,27,254	0/0:18,0:18:26.56:0,27,315	0/0:33,0:33:47.08:0,47,379	0/0:8,0:8:6.81:0,7,80
chr10	86732966	.	CA	C	3795.02	PASS	AB=0.944;AC=27;AF=0.482;AN=56;BaseQRankSum=6.076;DP=470;FS=0.000;HRun=12;HaplotypeScore=58.9450;InbreedingCoeff=0.7596;MQ=62.10;MQ0=20;MQRankSum=-0.049;QD=12.78;ReadPosRankSum=0.802;VQSLOD=3.5237;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:29:68.73:534,69,0	0/0:1,0:1:2.99:0,3,23	0/0:15,0:7:1.30:0,1,89	0/1:13,0:9:2.81:3,0,60	0/0:17,0:17:38.10:0,38,343	0/0:13,0:12:24.04:0,24,238	0/0:17,0:17:42.08:0,42,425	1/1:7,27:34:74.37:556,74,0	0/0:7,0:6:15.03:0,15,152	1/1:6,16:21:47.77:370,48,0	1/1:2,16:18:44.82:348,45,0	0/1:9,1:10:5.20:5,0,134	0/0:9,0:9:17.98:0,18,166	0/0:10,0:9:26.91:0,27,248	0/0:14,0:13:30.05:0,30,298	0/0:8,0:8:20.62:0,21,187	1/1:6,21:27:23.29:359,23,0	1/1:6,17:21:30.64:370,31,0	1/1:7,14:17:2.41:202,2,0	1/1:3,0:17:25.07:76,25,0	1/1:5,10:13:20.92:163,21,0	0/0:15,1:16:9.66:0,10,261	0/0:26,0:24:42.79:0,43,494	0/1:11,1:10:2.28:2,0,148	0/0:18,0:17:41.99:0,42,406	1/1:5,15:18:44.82:348,45,0	1/1:6,11:16:23.85:181,24,0	1/1:4,12:14:35.86:279,36,0
chr10	86733681	.	G	GAGGCT	2311.26	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.946;DP=603;FS=0.000;HRun=0;HaplotypeScore=124.8208;InbreedingCoeff=0.9414;MQ=87.06;MQ0=0;MQRankSum=-8.979;QD=50.24;ReadPosRankSum=-1.775;VQSLOD=3.3829;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,38:45:84.29:2406,84,0	0/0:5,0:5:9.03:0,9,187	0/0:23,0:22:60.21:0,60,1178	0/0:22,0:22:52.70:0,53,992	0/0:16,0:16:32.88:0,33,682	0/0:14,0:14:42.13:0,42,813	0/0:29,0:29:75.21:0,75,1441	0/0:23,0:23:57.20:0,57,1162	0/0:16,0:16:48.16:0,48,923	0/0:14,0:14:39.12:0,39,772	0/0:10,0:10:24.08:0,24,497	0/0:26,0:26:75.26:0,75,1536	0/0:32,0:32:75.18:0,75,1416	0/0:21,0:21:54.19:0,54,1119	0/0:20,0:20:51.17:0,51,1021	0/0:24,0:24:69.22:0,69,1380	0/0:33,0:33:96.33:0,96,1916	0/0:16,0:16:48.16:0,48,994	0/0:20,0:20:53.11:0,53,1075	0/0:10,0:10:27.09:0,27,557	0/0:63,0:63:99:0,178,3567	0/0:12,0:12:33.11:0,33,652	0/0:14,0:14:33.11:0,33,660	0/0:26,0:26:78.27:0,78,1595	0/0:15,0:15:36.10:0,36,675	0/0:24,0:24:60.20:0,60,1209	0/0:17,0:17:48.16:0,48,971	0/0:12,0:12:33.09:0,33,643
chr10	86734136	.	TC	T	2128.61	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.706;DP=527;FS=3.865;HRun=1;HaplotypeScore=56.3548;InbreedingCoeff=0.9908;MQ=71.43;MQ0=0;MQRankSum=1.043;QD=34.90;ReadPosRankSum=3.395;VQSLOD=3.7698;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1822	1/1:0,9:9:24.08:312,24,0	0/0:6,0:6:18.06:0,18,270	0/0:8,0:8:24.08:0,24,351	0/0:14,0:14:42.14:0,42,671	0/0:21,0:21:60.20:0,60,959	0/0:30,0:30:90.29:0,90,1406	0/0:23,0:23:63.21:0,63,984	0/0:19,0:19:57.18:0,57,874	1/1:0,16:16:48.12:592,48,0	1/1:0,5:5:15.01:176,15,0	0/0:21,0:21:63.20:0,63,982	0/0:31,0:31:93.30:0,93,1461	0/0:18,0:18:54.18:0,54,861	0/0:24,0:24:72.23:0,72,1123	0/0:17,0:17:51.17:0,51,815	1/1:0,31:31:93.30:1208,93,0	0/0:33,0:33:99:0,99,1570	0/0:17,0:17:48.16:0,48,764	0/0:14,0:14:42.14:0,42,672	0/0:40,0:40:99:0,117,1868	0/0:11,0:11:33.11:0,33,527	0/0:8,0:8:24.08:0,24,382	0/0:19,0:19:57.19:0,57,906	0/0:10,0:10:30.10:0,30,480	0/0:20,0:20:60.20:0,60,938	0/0:8,0:8:24.07:0,24,361	0/0:16,0:16:48.16:0,48,767
chr10	86734502	.	C	CTTGT	1422.68	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.529;DP=642;FS=7.177;HRun=0;HaplotypeScore=144.9773;InbreedingCoeff=0.9916;MQ=68.97;MQ0=2;MQRankSum=-2.641;QD=33.09;ReadPosRankSum=-0.028;VQSLOD=3.5123;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,24:43:66.22:1518,66,0	0/0:17,0:17:39.13:0,39,641	0/0:29,0:29:20.93:0,21,471	0/0:20,0:16:30.07:0,30,423	0/0:20,0:20:51.17:0,51,832	0/0:16,0:16:30.06:0,30,441	0/0:22,0:22:50.92:0,51,773	0/0:22,0:22:33.02:0,33,307	0/0:18,0:18:42.12:0,42,659	0/0:27,0:27:69.22:0,69,1081	0/0:24,0:24:54.16:0,54,827	0/0:25,0:25:48.16:0,48,786	0/0:24,0:24:60.20:0,60,981	0/0:19,0:19:45.15:0,45,740	0/0:22,0:22:60.20:0,60,983	0/0:17,0:17:39.13:0,39,641	0/0:26,0:26:66.20:0,66,1051	0/0:17,0:17:39.04:0,39,363	0/0:21,0:20:30.01:0,30,274	0/0:24,0:24:63.06:0,63,586	0/0:37,0:35:75.05:0,75,693	0/0:15,0:15:36.12:0,36,583	0/0:12,0:12:24.08:0,24,395	0/0:33,0:33:72.19:0,72,1119	0/0:25,0:25:39.13:0,39,629	0/0:26,0:26:51.02:0,51,466	0/0:24,0:24:66.07:0,66,614	0/0:16,0:16:45.05:0,45,419
chr10	86734507	.	TTG	T	6984.46	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.681;DP=637;FS=8.907;HRun=0;HaplotypeScore=94.2962;InbreedingCoeff=0.9994;MQ=66.70;MQ0=5;MQRankSum=0.769;QD=39.46;ReadPosRankSum=2.789;VQSLOD=6.2311;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,105,1482	0/0:17,0:17:51.14:0,51,867	0/0:30,0:26:67.74:0,68,1093	0/0:23,0:18:42.14:0,42,724	0/0:21,0:21:63.20:0,63,1163	0/0:15,0:15:45.12:0,45,817	0/0:22,0:22:65.89:0,66,1144	1/1:0,18:18:51.12:754,51,0	0/0:16,0:16:48.16:0,48,879	0/0:28,0:28:84.28:0,84,1521	0/0:25,0:25:66.22:0,66,1197	0/0:25,0:25:72.24:0,72,1290	0/0:24,0:24:72.25:0,72,1328	0/0:17,0:17:51.15:0,51,904	0/0:23,0:23:69.24:0,69,1279	0/0:17,0:17:51.13:0,51,899	0/0:30,0:30:87.25:0,87,1529	1/1:0,17:17:42.14:642,42,0	1/1:2,17:17:48.13:674,48,0	1/1:0,22:22:66.22:1010,66,0	1/1:1,35:34:84.29:1285,84,0	0/0:16,0:16:45.13:0,45,774	0/0:12,0:12:36.12:0,36,636	0/0:32,0:32:90.29:0,90,1643	0/0:23,0:23:66.21:0,66,1159	1/1:2,20:22:21.64:874,22,0	1/1:0,27:27:69.23:1056,69,0	1/1:0,16:16:45.15:689,45,0
chr10	86735601	.	C	CT	2140.45	PASS	AB=0.937;AC=19;AF=0.339;AN=56;BaseQRankSum=-2.693;DP=643;FS=2.328;HRun=14;HaplotypeScore=100.4412;InbreedingCoeff=0.6410;MQ=65.65;MQ0=21;MQRankSum=-3.192;QD=7.84;ReadPosRankSum=-3.188;VQSLOD=2.2227;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:78.99:0,79,505	0/0:2,0:9:2.75:0,3,19	0/1:20,0:13:9:9,0,29	0/1:18,0:13:1.08:1,0,45	0/0:26,1:27:25.73:0,26,270	0/0:15,0:16:20.18:0,20,201	0/0:23,0:27:49.29:0,49,291	1/1:11,20:32:51.63:441,52,0	0/1:16,1:16:0.62:1,0,102	0/0:16,0:34:34.96:0,35,99	0/0:1,0:8:13.46:0,13,38	0/0:19,0:19:30.58:0,31,176	0/0:17,0:18:11.27:0,11,188	0/0:21,0:22:34.25:0,34,218	0/1:23,2:25:4.88:5,0,200	0/0:19,0:19:16.76:0,17,148	0/0:14,0:40:41:0,41,145	1/1:9,9:17:41.51:341,42,0	1/1:10,13:20:35.41:300,35,0	1/1:18,15:35:6.28:353,6,0	1/1:6,5:10:14.96:125,15,0	0/0:20,0:22:22.87:0,23,229	0/0:14,0:16:23.91:0,24,134	0/0:27,0:27:33.51:0,34,292	0/0:22,0:21:33.22:0,33,277	0/1:12,3:17:11.32:140,0,11	1/1:14,19:34:51.94:430,52,0	1/1:4,10:14:23.58:185,24,0
chr10	86735790	.	GA	G	1930.48	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.799;DP=621;FS=23.912;HRun=2;HaplotypeScore=109.8463;InbreedingCoeff=0.9631;MQ=70.07;MQ0=0;MQRankSum=-11.488;QD=15.95;ReadPosRankSum=1.776;VQSLOD=2.4048;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,154,2291	0/0:9,0:9:27.09:0,27,405	0/0:10,0:10:24.05:0,24,311	0/0:17,1:16:34:0,34,484	0/0:28,0:28:84.26:0,84,1218	0/0:26,0:26:66.22:0,66,988	0/0:35,0:35:99:0,102,1528	1/1:7,2:9:11.87:105,12,0	0/0:26,0:26:75.25:0,75,1103	0/0:25,0:25:72.24:0,72,1061	0/0:24,0:24:69.23:0,69,1021	0/0:17,0:17:51.16:0,51,744	0/0:14,0:14:42.14:0,42,623	0/0:22,0:22:66.20:0,66,950	0/0:42,0:42:99:0,126,1785	0/0:32,0:32:96.30:0,96,1400	0/0:35,0:35:99:0,105,1531	1/1:6,5:11:15.05:179,15,0	1/1:6,8:13:24.07:286,24,0	1/1:4,20:24:54.16:637,54,0	1/1:7,3:10:6:59,6,0	0/0:23,0:23:69.23:0,69,1034	0/0:15,0:15:45.15:0,45,674	0/0:25,0:25:72.19:0,72,1035	0/0:23,0:23:69.19:0,69,972	1/1:9,12:21:36.07:407,36,0	1/1:14,13:24:30.09:351,30,0	1/1:2,3:5:9.03:107,9,0
chr10	86735800	.	G	GC	1711.94	PASS	AB=0.544;AC=14;AF=0.250;AN=56;BaseQRankSum=12.512;DP=572;FS=16.034;HRun=0;HaplotypeScore=109.2043;InbreedingCoeff=0.8490;MQ=63.86;MQ0=0;MQRankSum=-11.959;QD=24.81;ReadPosRankSum=3.345;VQSLOD=3.2890;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,153,2113	0/0:9,0:9:27.09:0,27,377	0/0:12,0:11:30.02:0,30,352	0/0:15,0:12:30.24:0,30,344	0/0:28,0:28:81.27:0,81,1132	0/0:23,0:23:66.22:0,66,923	0/0:36,0:36:99:0,105,1445	1/1:1,2:3:6.02:70,6,0	0/0:30,0:30:87.27:0,87,1183	0/0:24,0:24:66.22:0,66,923	0/0:23,0:23:63.21:0,63,876	0/0:20,0:20:60.20:0,60,839	0/0:13,0:13:39.10:0,39,511	0/0:26,0:26:78.21:0,78,1052	0/0:42,0:42:99:0,120,1623	0/0:33,0:33:96.32:0,96,1342	0/0:30,0:30:90.28:0,90,1238	0/1:1,5:6:0.35:155,0,0	1/1:1,7:8:24.07:298,24,0	1/1:1,18:19:51.14:570,51,0	1/1:1,3:4:9.44:63,9,0	0/0:23,0:23:69.22:0,69,948	0/0:15,0:15:45.15:0,45,627	0/0:25,0:25:72.24:0,72,1005	0/0:24,0:24:72.22:0,72,974	0/1:2,11:13:3.11:333,0,3	1/1:4,9:13:28.48:300,28,0	1/1:0,3:3:9.03:106,9,0
chr10	86735802	.	A	AGTGGAT	4757	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.965;DP=569;FS=9.624;HRun=0;HaplotypeScore=154.4753;InbreedingCoeff=0.9600;MQ=61.77;MQ0=0;MQRankSum=-11.294;QD=63.43;ReadPosRankSum=2.637;VQSLOD=4.9235;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,153,3595	0/0:9,0:9:27.08:0,27,639	0/0:11,0:10:24.02:0,24,460	0/0:14,0:11:12.78:0,13,351	0/0:29,0:29:84.14:0,84,2015	0/0:24,0:24:66.23:0,66,1661	0/0:35,0:35:99:0,105,2439	1/1:1,2:3:7.58:171,8,0	0/0:30,0:30:90.26:0,90,2066	0/0:25,0:25:69.23:0,69,1715	0/0:23,0:23:66.19:0,66,1551	0/0:20,0:20:60.19:0,60,1408	0/0:11,0:11:33.11:0,33,845	0/0:26,0:26:78.24:0,78,1858	0/0:38,0:38:99:0,114,2571	0/0:33,0:33:99:0,99,2456	0/0:29,0:29:87.26:0,87,2090	1/1:2,5:7:18.06:456,18,0	1/1:3,7:10:21.07:592,21,0	1/1:1,18:19:51.18:1358,51,0	1/1:3,3:6:9.03:194,9,0	0/0:22,0:22:66.21:0,66,1609	0/0:16,0:16:48.15:0,48,1132	0/0:25,0:25:72.21:0,72,1732	0/0:23,0:23:69.21:0,69,1614	1/1:3,11:14:39.13:976,39,0	1/1:4,9:13:33.08:762,33,0	1/1:0,3:3:9.03:248,9,0
chr10	86735803	.	C	CTGT	7093.83	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.538;DP=631;FS=6.830;HRun=0;HaplotypeScore=143.7065;InbreedingCoeff=0.9684;MQ=59.54;MQ0=2;MQRankSum=-14.427;QD=52.55;ReadPosRankSum=-3.445;VQSLOD=5.2861;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,141,2405	0/0:9,0:9:24.08:0,24,409	0/0:12,0:11:21.07:0,21,357	0/0:14,0:12:4:0,4,232	0/0:29,0:29:81.28:0,81,1382	0/0:25,0:25:66.23:0,66,1125	0/0:34,0:34:99:0,99,1657	1/1:15,2:15:39.13:876,39,0	0/0:30,0:30:87.30:0,87,1483	0/0:25,0:25:72.24:0,72,1203	0/0:24,0:24:63.20:0,63,1047	0/0:21,0:21:57.19:0,57,967	0/0:12,0:12:33.11:0,33,563	0/0:27,0:27:78.27:0,78,1327	0/0:36,0:36:99:0,102,1688	0/0:33,0:33:99:0,99,1689	0/0:27,0:27:81.25:0,81,1352	1/1:5,6:11:21.07:449,21,0	1/1:6,7:13:33.11:683,33,0	1/1:5,18:23:63.20:1273,63,0	1/1:15,3:18:36.07:680,36,0	0/0:24,0:24:63.21:0,63,1074	0/0:17,0:17:48.16:0,48,813	0/0:24,0:24:66.23:0,66,1126	0/0:22,0:22:66.21:0,66,1101	1/1:11,13:27:81.28:1657,81,0	1/1:13,9:20:57.20:1220,57,0	1/1:1,3:4:12.04:256,12,0
chr10	86736047	.	C	CA	8649.94	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.397;DP=702;FS=0.628;HRun=1;HaplotypeScore=81.1435;InbreedingCoeff=0.9570;MQ=80.02;MQ0=0;MQRankSum=-2.788;QD=38.96;ReadPosRankSum=-2.373;VQSLOD=4.4005;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,163,2086	0/0:16,0:16:45.15:0,45,583	0/0:19,0:19:44.63:0,45,553	0/0:17,0:17:38.84:0,39,493	0/0:20,0:20:60.20:0,60,779	0/0:31,0:31:90.29:0,90,1167	0/0:18,0:18:54.18:0,54,700	1/1:1,37:37:99:1554,111,0	0/0:24,0:24:69.21:0,69,881	0/0:23,0:23:69.22:0,69,885	0/0:23,0:23:63.20:0,63,817	0/0:27,0:27:81.25:0,81,1036	0/0:22,0:22:66.20:0,66,840	0/0:18,0:18:54.18:0,54,701	0/0:24,0:24:72.22:0,72,920	0/0:16,0:16:48.16:0,48,622	0/0:27,0:27:75.14:0,75,973	1/1:1,19:20:51.17:763,51,0	1/1:3,29:32:87.29:1299,87,0	1/1:4,24:28:72.16:1027,72,0	1/1:1,24:25:66.22:989,66,0	0/0:35,0:35:99:0,99,1269	0/0:23,0:23:69.21:0,69,881	0/0:25,0:25:75.18:0,75,938	0/0:16,0:16:33.11:0,33,429	1/1:7,24:31:0.33:994,0,0	1/1:0,33:33:93.32:1394,93,0	1/1:0,15:15:42.14:629,42,0
chr10	86736564	.	CACAGACAGACAG	C	3209.72	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=9.140;DP=783;FS=0.642;HRun=0;HaplotypeScore=254.0113;InbreedingCoeff=0.9210;MQ=64.03;MQ0=2;MQRankSum=-8.052;QD=23.26;ReadPosRankSum=-2.116;VQSLOD=2.2916;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,23:38:27.09:900,27,0	1/1:1,3:4:6.02:207,6,0	0/1:26,0:17:0:0,0,0	0/0:28,0:22:9:0,9,96	0/0:27,0:28:51.16:0,51,2248	0/0:20,0:20:36.11:0,36,1826	0/0:28,0:28:63.22:0,63,3103	0/0:33,0:33:24.08:0,24,786	0/0:28,0:28:51.17:0,51,2657	1/1:4,9:13:23.94:511,24,0	1/1:6,11:17:15.05:517,15,0	0/0:25,0:25:51.17:0,51,2594	0/0:26,0:26:50.91:0,51,2462	0/0:27,0:27:51.14:0,51,2498	0/0:29,0:29:60.19:0,60,3071	0/0:35,0:35:60.21:0,60,3355	1/1:14,26:40:36.12:1242,36,0	0/0:13,0:30:54.10:0,54,2253	0/0:33,0:33:37.37:0,37,1719	0/0:27,0:27:66.23:0,66,3334	0/0:46,0:46:81.28:0,81,3954	0/0:20,0:20:48.15:0,48,2306	0/0:27,0:27:60.06:0,60,2712	0/0:54,0:53:65.85:0,66,4603	0/0:17,0:18:27.09:0,27,1386	0/0:49,0:49:96.33:0,96,4497	0/0:24,0:23:47.91:0,48,2496	0/0:10,0:10:24.08:0,24,1383
chr10	86736747	.	CTT	C	4032.15	PASS	AB=0.633;AC=24;AF=0.429;AN=56;BaseQRankSum=1.922;DP=650;FS=5.015;HRun=15;HaplotypeScore=87.4859;InbreedingCoeff=0.8293;MQ=64.77;MQ0=14;MQRankSum=1.641;QD=12.97;ReadPosRankSum=3.207;VQSLOD=3.0724;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,34:41:41.82:575,42,0	0/1:3,5:9:7.18:112,0,7	0/0:24,0:8:8.77:0,9,51	0/0:17,0:10:10.82:0,11,50	0/0:31,0:36:61.64:0,62,781	0/0:24,0:25:56.58:0,57,643	0/0:26,1:29:44.40:0,44,756	1/1:13,11:26:24.37:281,24,0	0/0:11,0:11:24.03:0,24,304	1/1:4,17:20:38.52:337,39,0	1/1:5,12:18:2.17:161,2,0	0/0:23,0:23:50.80:0,51,526	0/0:22,0:23:41.41:0,41,494	0/0:19,0:20:29.31:0,29,373	0/0:21,0:24:39.47:0,39,445	0/0:12,0:13:30.05:0,30,359	1/1:7,31:41:60.91:547,61,0	1/1:8,19:27:50.35:421,50,0	1/1:11,9:19:23.67:240,24,0	1/1:13,12:23:13.98:264,14,0	1/1:3,8:10:23.98:211,24,0	0/0:24,0:25:57.46:0,57,583	0/0:22,0:22:57.06:0,57,692	0/0:18,0:18:30.79:0,31,446	0/0:22,0:26:34.81:0,35,577	1/1:7,22:31:59.10:483,59,0	0/1:9,7:18:8.27:189,0,8	1/1:3,17:20:23.94:211,24,0
chr10	86738177	.	AAC	A	245.84	PASS	AB=0.978;AC=20;AF=0.417;AN=48;BaseQRankSum=2.730;DP=457;FS=0.000;HRun=0;HaplotypeScore=73.3112;InbreedingCoeff=0.0048;MQ=54.41;MQ0=37;MQRankSum=1.579;QD=1.19;ReadPosRankSum=0.174;VQSLOD=1.1565;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:3.29:14,3,0	1/1:4,1:5:3.01:33,3,0	./.	./.	0/0:13,0:13:9.01:0,9,105	0/1:22,0:21:27.97:28,0,226	0/1:36,0:34:24.33:24,0,223	0/0:32,0:28:14.82:0,15,98	0/1:8,1:9:21.68:22,0,52	0/1:6,0:5:23.42:23,0,71	./.	0/1:11,1:12:19.03:19,0,96	0/0:10,0:10:2.99:0,3,23	1/1:12,0:10:0.43:1,0,0	0/0:11,0:11:0:0,0,0	0/0:10,0:10:6.49:0,6,90	0/0:26,1:25:0.22:0,0,321	0/1:12,0:12:4.65:5,0,28	1/1:14,0:10:2.64:13,3,0	./.	0/0:38,0:35:0.89:0,1,2	0/0:2,0:2:3.01:0,3,45	1/1:6,0:6:2.60:10,3,0	1/1:22,3:24:17.83:172,18,0	0/0:12,0:12:3.86:0,4,113	0/0:19,0:19:2.17:0,2,74	0/1:11,0:11:4.68:5,0,28	0/1:12,0:12:7.14:7,0,13
chr10	86738203	.	CACACACACACACACAG	C	1603.88	PASS	AB=0.962;AC=13;AF=0.232;AN=56;BaseQRankSum=8.280;DP=457;FS=11.773;HRun=0;HaplotypeScore=171.3960;InbreedingCoeff=0.5063;MQ=45.60;MQ0=33;MQRankSum=-5.722;QD=11.22;ReadPosRankSum=-2.860;VQSLOD=1.3549;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:29:50:0,50,1026	0/0:4,0:4:3.01:0,3,172	0/0:18,0:1:3.01:0,3,34	0/0:24,0:3:5.74:0,6,52	0/0:13,0:13:15.02:0,15,404	0/0:20,0:20:41.88:0,42,2017	0/0:33,0:31:44.36:0,44,1530	0/1:29,0:24:4.02:107,0,4	0/0:11,0:11:12.29:0,12,746	0/0:9,0:7:21.07:0,21,901	0/0:11,0:10:11.97:0,12,198	0/0:16,0:16:25.60:0,26,1126	0/0:11,0:10:8.98:0,9,74	0/0:15,0:13:20.47:0,20,497	0/0:11,0:11:27.05:0,27,660	0/0:13,0:13:29.72:0,30,872	0/0:31,0:29:52.37:0,52,2714	0/1:11,1:12:14.47:221,0,14	1/1:11,1:7:6.07:327,6,0	1/1:3,0:2:3.01:36,3,0	1/1:39,0:34:15.19:121,15,0	0/0:3,0:3:3.01:0,3,229	0/0:8,0:8:11.96:0,12,262	0/0:21,0:20:36.06:0,36,1281	0/0:10,0:10:23.69:0,24,834	0/1:25,1:25:25.91:410,0,26	1/1:16,2:16:6.77:346,7,0	1/1:4,0:4:6.02:194,6,0
chr10	86738215	.	CACAG	C	1353.59	PASS	AB=0.982;AC=21;AF=0.375;AN=56;BaseQRankSum=10.465;DP=497;FS=23.602;HRun=0;HaplotypeScore=107.3428;InbreedingCoeff=0.4688;MQ=46.50;MQ0=29;MQRankSum=-6.489;QD=4.60;ReadPosRankSum=-3.439;VQSLOD=-0.2566;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:26:58.28:58,0,293	0/1:4,0:4:2.97:3,0,35	1/1:28,0:1:2.04:6,2,0	0/1:43,0:6:10.07:13,0,10	0/0:15,0:14:20.99:0,21,235	0/0:22,0:22:40.47:0,40,619	0/0:32,0:30:30.19:0,30,709	1/1:25,0:22:4.33:212,4,0	0/0:11,0:11:17.99:0,18,215	0/0:11,0:10:30.04:0,30,411	0/0:10,0:10:14.94:0,15,141	0/0:19,0:19:34.18:0,34,434	0/0:13,0:12:20.20:0,20,170	0/0:15,0:13:23.72:0,24,180	0/0:12,0:12:32.97:0,33,318	0/0:11,0:11:29.14:0,29,373	0/1:37,0:35:6.93:7,0,914	0/1:12,2:14:3.75:187,0,4	0/1:13,0:10:3.83:149,0,4	1/1:3,0:2:2.92:17,3,0	1/1:33,2:32:31.86:226,32,0	0/0:4,0:4:6.01:0,6,100	0/0:6,0:6:14.95:0,15,138	0/0:22,0:21:49.88:0,50,400	0/1:11,0:11:3.84:4,0,286	1/1:22,1:22:19.39:278,19,0	1/1:17,2:17:11.72:209,12,0	1/1:5,5:10:23.05:166,23,0
chr10	86738237	.	T	TTC	4246.28	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=7.846;DP=554;FS=25.210;HRun=0;HaplotypeScore=98.9366;InbreedingCoeff=0.9542;MQ=54.40;MQ0=19;MQRankSum=-2.327;QD=26.05;ReadPosRankSum=-2.415;VQSLOD=2.7819;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:69.05:0,69,798	0/0:6,0:6:12.04:0,12,150	0/0:41,0:6:8.19:0,8,83	0/0:59,0:13:13.35:0,13,113	0/0:13,0:12:21.03:0,21,248	0/0:18,0:18:45.01:0,45,525	0/0:33,0:33:70.76:0,71,862	1/1:9,23:33:47.02:1082,47,0	0/0:13,0:13:33.11:0,33,416	0/0:17,0:17:45.14:0,45,560	0/0:12,0:12:30.05:0,30,349	0/0:15,0:15:32.67:0,33,416	0/0:11,0:11:30.10:0,30,378	0/0:10,0:10:24.08:0,24,303	0/0:14,0:14:39.12:0,39,492	0/0:14,0:14:36.11:0,36,443	0/0:35,0:34:84.12:0,84,1003	1/1:5,15:20:16.54:407,17,0	1/1:6,9:18:31.38:493,31,0	1/1:0,5:5:6.02:99,6,0	1/1:7,21:29:29.82:475,30,0	0/0:7,0:7:15:0,15,159	0/0:8,0:8:21.03:0,21,248	0/0:23,0:23:54.13:0,54,663	0/0:13,0:13:33.06:0,33,388	1/1:3,20:24:25.32:890,25,0	1/1:5,16:19:33.07:495,33,0	1/1:2,10:12:20.74:305,21,0
chr10	86738593	.	A	AG	2901.55	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.039;DP=511;FS=10.569;HRun=1;HaplotypeScore=86.4530;InbreedingCoeff=0.9688;MQ=77.09;MQ0=0;MQRankSum=-15.135;QD=22.67;ReadPosRankSum=0.568;VQSLOD=2.6139;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,1837	0/0:5,0:5:12.04:0,12,156	0/0:19,0:19:51.16:0,51,657	0/0:18,0:18:42.67:0,43,579	0/0:6,0:6:15.03:0,15,194	0/0:22,0:22:66.20:0,66,843	0/0:25,0:25:72.20:0,72,905	1/1:2,16:18:53.98:500,54,0	0/0:22,0:22:66.20:0,66,842	0/0:13,0:13:33.11:0,33,428	0/0:5,0:5:15.05:0,15,195	0/0:18,0:18:54.18:0,54,701	0/0:18,0:18:54.13:0,54,657	0/0:24,0:24:66.21:0,66,844	0/0:31,0:31:84.27:0,84,1091	0/0:21,0:21:63.19:0,63,804	0/0:39,0:39:99:0,117,1518	1/1:3,15:18:54.07:532,54,0	1/1:3,10:13:18.61:244,19,0	1/1:0,11:11:32.95:274,33,0	1/1:4,15:19:43.49:354,43,0	0/0:3,0:3:9.03:0,9,116	0/0:3,0:3:9.01:0,9,102	0/0:32,0:32:93.29:0,93,1194	0/0:10,0:10:30.08:0,30,375	1/1:5,9:14:33.90:329,34,0	1/1:1,25:26:71.92:610,72,0	1/1:0,9:9:27.04:265,27,0
chr10	86738595	.	CTATAA	C	5396.45	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.254;DP=499;FS=6.376;HRun=0;HaplotypeScore=113.6492;InbreedingCoeff=0.9424;MQ=79.51;MQ0=0;MQRankSum=-14.037;QD=46.52;ReadPosRankSum=0.946;VQSLOD=4.5364;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,4467	0/0:4,0:4:12.04:0,12,399	0/0:19,0:19:57.20:0,57,1757	0/0:17,0:18:47.92:0,48,1500	0/0:6,0:6:15.50:0,15,422	0/0:23,0:23:69.24:0,69,2263	0/0:24,0:24:72.22:0,72,2196	1/1:1,15:16:48.16:838,48,0	0/0:24,0:24:72.25:0,72,2357	0/0:12,0:12:36.12:0,36,1158	0/0:5,0:5:15.05:0,15,500	0/0:19,0:19:57.18:0,57,1788	0/0:18,0:18:54.19:0,54,1790	0/0:23,0:23:69.24:0,69,2263	0/0:31,0:31:87.28:0,87,2810	0/0:20,0:20:60.21:0,60,1998	0/0:39,0:39:99:0,117,3816	1/1:2,13:15:45.07:790,45,0	1/1:3,10:13:2.39:452,2,0	1/1:0,11:11:33.11:550,33,0	1/1:1,15:16:32.91:536,33,0	0/0:4,0:4:12.04:0,12,337	0/0:3,0:3:9.03:0,9,300	0/0:31,0:31:93.29:0,93,2946	0/0:11,0:11:33.11:0,33,1040	1/1:0,13:13:39.07:571,39,0	1/1:1,22:23:69.24:1172,69,0	1/1:0,9:9:27.09:489,27,0
chr10	86739290	.	AC	A	6844.35	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.301;DP=674;FS=4.785;HRun=2;HaplotypeScore=64.1835;InbreedingCoeff=0.9996;MQ=80.42;MQ0=0;MQRankSum=-1.789;QD=36.21;ReadPosRankSum=-1.219;VQSLOD=4.8773;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,2016	0/0:10,0:10:30.10:0,30,432	0/0:14,0:14:35.22:0,35,549	0/0:22,0:22:45.16:0,45,760	0/0:19,0:19:57.18:0,57,828	0/0:11,0:11:33.11:0,33,494	0/0:33,0:33:93.30:0,93,1368	1/1:0,22:22:66.20:841,66,0	0/0:32,0:32:96.31:0,96,1416	0/0:19,0:19:57.18:0,57,833	0/0:17,0:17:51.15:0,51,722	0/0:28,0:28:81.27:0,81,1212	0/0:29,0:29:87.29:0,87,1300	0/0:24,0:24:72.24:0,72,1077	0/0:33,0:33:90.30:0,90,1348	0/0:28,0:28:81.26:0,81,1194	0/0:44,0:44:99:0,132,1942	1/1:1,28:29:84.27:1090,84,0	1/1:2,15:17:45.14:567,45,0	1/1:0,9:9:27.09:350,27,0	1/1:0,49:49:99:1674,129,0	0/0:14,0:14:42.14:0,42,628	0/0:12,0:12:33.11:0,33,493	0/0:37,0:37:99:0,111,1661	0/0:14,0:14:39.11:0,39,562	1/1:1,27:28:39.30:1000,39,0	1/1:0,24:24:69.22:894,69,0	1/1:0,11:11:33.11:428,33,0
chr10	86742417	.	T	TC	72.29	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=2.424;DP=437;FS=1.740;HRun=1;HaplotypeScore=53.7517;InbreedingCoeff=0.7455;MQ=85.38;MQ0=0;MQRankSum=-2.101;QD=6.57;ReadPosRankSum=-2.300;VQSLOD=-0.1346;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1634	0/0:12,0:12:33.11:0,33,461	0/0:15,0:15:45.15:0,45,614	0/0:12,0:12:33.11:0,33,457	0/0:9,0:9:27.09:0,27,371	0/0:17,0:17:51.15:0,51,693	0/0:41,0:41:99:0,123,1718	./.	0/0:17,0:17:51.17:0,51,712	0/0:18,0:18:54.17:0,54,740	0/0:4,0:4:12.03:0,12,151	0/0:31,0:31:93.30:0,93,1277	0/0:24,0:24:72.22:0,72,982	0/0:21,0:21:57.19:0,57,796	0/0:19,0:19:57.18:0,57,778	0/0:19,0:19:57.16:0,57,774	0/0:56,0:56:99:0,169,2305	1/1:4,0:4:3:27,3,0	1/1:1,0:1:3:25,3,0	1/1:0,1:1:3.01:36,3,0	1/1:1,2:3:3.01:48,3,0	0/0:16,0:16:46.95:0,47,615	0/0:9,0:9:27.08:0,27,360	0/0:35,0:34:99:0,105,1464	0/0:11,0:11:33.11:0,33,461	1/1:0,1:1:3.01:38,3,0	1/1:0,1:1:3.01:36,3,0	./.
chr10	86744458	.	CAGCATGTCACCT	C	1506.89	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.053;DP=860;FS=5.791;HRun=0;HaplotypeScore=275.1894;InbreedingCoeff=0.9070;MQ=62.36;MQ0=2;MQRankSum=2.943;QD=17.52;ReadPosRankSum=-0.791;VQSLOD=1.9786;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,153,4128	1/1:9,0:9:27.01:358,27,0	0/0:21,0:14:29.94:0,30,294	0/0:35,0:31:53.56:0,54,727	0/0:21,0:21:42.08:0,42,867	0/0:21,0:21:54.12:0,54,1503	0/0:34,0:34:75.16:0,75,1536	0/0:34,0:34:42.08:0,42,509	0/0:39,0:39:96.22:0,96,3224	1/1:12,23:35:89.74:1070,90,0	0/0:2,13:15:0.39:0,0,1	0/0:46,0:46:99:0,108,2856	0/0:33,0:33:78.16:0,78,2115	0/0:36,0:36:81.17:0,81,2077	0/0:43,0:43:99:0,105,3471	0/0:21,0:21:54.13:0,54,1748	1/1:7,35:42:6.02:212,6,0	0/0:36,0:36:93.21:0,93,2590	0/0:20,0:20:48.05:0,48,818	0/0:15,0:15:27:0,27,542	0/0:82,0:82:99:0,195,5448	0/0:21,0:21:54.06:0,54,1378	0/0:19,0:19:42:0,42,903	0/0:50,0:50:99:0,132,4063	0/0:9,0:9:18.04:0,18,566	0/0:24,0:24:54.15:0,54,980	0/0:31,0:31:72.19:0,72,1839	0/0:11,0:11:32.99:0,33,787
chr10	86744752	.	AGT	A	3205.54	PASS	AB=0.545;AC=15;AF=0.268;AN=56;BaseQRankSum=8.147;DP=407;FS=3.148;HRun=0;HaplotypeScore=55.6523;InbreedingCoeff=0.8814;MQ=84.73;MQ0=0;MQRankSum=-2.073;QD=34.84;ReadPosRankSum=1.969;VQSLOD=5.8599;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.15:0,87,1442	0/0:4,0:4:7.24:0,7,134	0/0:26,0:26:72.11:0,72,1118	0/0:15,0:15:31.06:0,31,471	0/0:7,0:7:21.07:0,21,392	0/0:9,0:9:24.07:0,24,411	0/0:23,0:23:57.12:0,57,903	1/1:0,6:5:12.04:166,12,0	0/0:12,0:12:36.12:0,36,674	0/0:17,0:17:51.10:0,51,850	0/0:8,0:8:24.08:0,24,441	0/0:22,0:22:60.05:0,60,1041	0/0:7,0:7:21.07:0,21,393	0/0:21,0:21:60.18:0,60,1060	0/0:22,0:22:66.20:0,66,1172	0/0:14,0:14:39.11:0,39,668	0/0:17,0:17:51.02:0,51,802	1/1:0,14:14:30.10:459,30,0	1/1:0,5:5:15.02:197,15,0	1/1:0,13:13:33.11:504,33,0	1/1:2,20:22:51.17:780,51,0	0/0:13,0:13:39.09:0,39,630	0/0:9,0:9:21.07:0,21,368	0/0:29,0:29:87.28:0,87,1572	0/0:10,0:10:30.09:0,30,530	0/1:2,10:12:21.84:427,0,22	1/1:0,15:14:42.14:642,42,0	1/1:0,5:5:15.05:229,15,0
chr10	86744753	.	GT	G	1090.55	PASS	AB=0.923;AC=15;AF=0.268;AN=56;BaseQRankSum=11.180;DP=403;FS=2.225;HRun=1;HaplotypeScore=54.9711;InbreedingCoeff=0.8932;MQ=84.86;MQ0=0;MQRankSum=-2.564;QD=11.85;ReadPosRankSum=1.987;VQSLOD=2.2276;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.14:0,87,1160	0/0:4,0:4:8.61:0,9,112	0/0:27,0:27:74.37:0,74,936	0/0:15,1:16:21.75:0,22,394	0/0:7,0:7:21.07:0,21,307	0/0:8,0:8:24.07:0,24,331	0/0:20,0:20:60.11:0,60,756	1/1:7,0:6:11.19:62,11,0	0/0:12,0:12:36.12:0,36,526	0/0:17,0:17:51.10:0,51,683	0/0:8,0:8:24.08:0,24,343	0/0:21,0:21:59.94:0,60,813	0/0:7,0:7:21.07:0,21,306	0/0:21,0:21:60.17:0,60,838	0/0:22,0:22:66.20:0,66,926	0/0:14,0:14:39.07:0,39,533	0/0:17,0:17:48.08:0,48,618	1/1:14,0:14:29.24:169,29,0	1/1:5,0:5:14.69:91,15,0	1/1:13,0:13:32.17:185,32,0	1/1:20,1:21:49.72:288,50,0	0/0:13,0:13:39.09:0,39,512	0/0:8,1:9:21.04:0,21,284	0/0:29,0:29:87.26:0,87,1227	0/0:10,0:10:30.09:0,30,420	0/1:11,1:12:8.71:171,0,9	1/1:15,0:14:40.94:236,41,0	1/1:5,0:5:14.62:84,15,0
chr10	86746895	.	AG	A	5100.16	PASS	AB=0.971;AC=22;AF=0.393;AN=56;BaseQRankSum=12.970;DP=606;FS=1.455;HRun=6;HaplotypeScore=100.6214;InbreedingCoeff=0.7569;MQ=81.33;MQ0=0;MQRankSum=-3.292;QD=17.90;ReadPosRankSum=-0.602;VQSLOD=4.2232;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:66.17:708,66,0	0/0:5,0:5:12.73:0,13,49	0/0:29,1:28:23.56:0,24,578	0/1:18,0:17:6.69:7,0,266	0/0:32,0:32:87.27:0,87,1128	0/0:20,0:20:48.16:0,48,631	0/0:21,0:21:54.15:0,54,681	1/1:2,18:20:53.80:543,54,0	0/0:21,0:21:54.17:0,54,696	0/1:28,1:29:5.63:6,0,114	0/1:24,1:25:0.85:1,0,125	0/0:21,0:21:60.17:0,60,761	0/0:18,0:18:48.15:0,48,616	0/0:15,0:15:45.11:0,45,549	0/0:21,0:21:60.18:0,60,763	0/0:25,0:25:75.20:0,75,931	0/1:21,1:22:18.16:18,0,119	1/1:0,23:23:60.15:643,60,0	1/1:3,15:19:47.82:478,48,0	1/1:5,23:28:65.78:633,66,0	1/1:0,9:9:24.06:257,24,0	0/0:19,0:19:45.09:0,45,530	0/0:17,0:17:51.17:0,51,666	0/0:28,0:28:81.25:0,81,1050	0/0:28,0:28:81.24:0,81,1035	1/1:4,26:30:66.95:778,67,0	1/1:0,20:20:60.15:643,60,0	1/1:1,14:15:36.09:386,36,0
chr10	86747323	.	A	AAAC	3063.60	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.445;DP=653;FS=1.068;HRun=0;HaplotypeScore=94.0885;InbreedingCoeff=0.8147;MQ=68.84;MQ0=4;MQRankSum=0.465;QD=18.13;ReadPosRankSum=-1.931;VQSLOD=3.2790;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:46:78.17:0,78,953	0/0:7,0:7:12.04:0,12,160	0/0:21,0:15:3:0,3,25	0/0:20,0:19:2.90:0,3,16	0/0:22,0:22:38.80:0,39,441	0/0:25,0:25:6.23:0,6,471	0/0:24,0:24:33.06:0,33,406	0/1:32,0:32:24.78:132,0,25	0/0:19,0:19:27.06:0,27,330	0/0:32,0:32:51.11:0,51,602	0/0:20,0:20:39.13:0,39,517	0/0:22,0:22:45.13:0,45,584	0/0:29,0:29:47.82:0,48,597	0/0:30,0:30:45.11:0,45,545	0/0:31,0:32:66.16:0,66,831	0/0:15,0:15:33.10:0,33,424	0/0:17,0:17:27.08:0,27,344	1/1:11,0:23:11.83:125,12,0	1/1:11,9:19:27.09:487,27,0	1/1:10,8:20:26.94:438,27,0	1/1:6,15:21:27.09:522,27,0	0/0:27,0:27:69.19:0,69,876	0/0:20,0:20:29.84:0,30,333	0/0:33,0:33:75.20:0,75,927	0/0:21,0:23:33.06:0,33,394	1/1:8,14:22:42.10:705,42,0	1/1:6,16:23:36.04:674,36,0	1/1:3,5:8:9.03:174,9,0
chr10	86748586	.	T	TCC	3550.03	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-10.708;DP=509;FS=2.132;HRun=7;HaplotypeScore=60.2304;InbreedingCoeff=0.9495;MQ=75.23;MQ0=0;MQRankSum=0.384;QD=30.87;ReadPosRankSum=-2.715;VQSLOD=3.0584;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:96.25:0,96,1095	0/0:5,0:5:12.03:0,12,140	0/0:10,0:10:23.95:0,24,247	0/0:9,0:8:14.98:0,15,143	0/0:2,0:2:6.02:0,6,70	0/0:11,0:11:30.09:0,30,349	0/0:27,0:27:78.11:0,78,878	1/1:2,9:12:27.04:363,27,0	0/0:30,0:31:74.87:0,75,849	0/0:16,0:16:35.91:0,36,419	0/0:10,0:10:24.07:0,24,279	0/0:35,0:35:99:0,105,1191	0/0:24,0:25:53.81:0,54,664	0/0:21,0:21:60.14:0,60,675	0/0:18,0:18:54.15:0,54,616	0/0:10,0:10:27.06:0,27,302	0/0:39,0:39:93.21:0,93,1060	0/0:32,0:31:69.15:0,69,790	1/1:2,12:17:44.56:611,45,0	1/1:1,4:5:9.03:148,9,0	1/1:9,36:45:72.25:1181,72,0	0/0:7,0:7:15.04:0,15,175	0/0:5,0:5:15.04:0,15,175	0/0:29,0:29:66.14:0,66,756	0/0:15,0:15:38.93:0,39,454	1/1:4,12:16:36.05:508,36,0	1/1:1,15:16:33.11:541,33,0	1/1:0,4:4:12.04:197,12,0
chr10	86749228	.	ATGT	A	2614.49	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.480;DP=610;FS=0.000;HRun=0;HaplotypeScore=88.8727;InbreedingCoeff=0.9992;MQ=84.44;MQ0=0;MQRankSum=-3.898;QD=35.81;ReadPosRankSum=1.531;VQSLOD=4.3430;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.26:0,96,1952	1/1:0,8:8:23.94:325,24,0	0/0:22,0:22:63.09:0,63,1193	0/0:16,0:16:42.14:0,42,845	0/0:25,0:25:72.21:0,72,1498	0/0:22,0:22:66.23:0,66,1474	0/0:32,0:32:93.29:0,93,1975	0/0:28,0:28:75.26:0,75,1662	0/0:22,0:22:63.22:0,63,1402	1/1:2,21:23:57.19:931,57,0	1/1:0,17:17:48.16:784,48,0	0/0:21,0:21:60.19:0,60,1288	0/0:25,0:25:72.25:0,72,1604	0/0:18,0:18:54.19:0,54,1175	0/0:39,0:39:99:0,114,2460	0/0:29,0:29:84.29:0,84,1859	1/1:1,24:25:45.15:735,45,0	0/0:10,0:10:30.10:0,30,670	0/0:19,0:19:54.16:0,54,1124	0/0:17,0:17:48.15:0,48,1030	0/0:17,0:17:48.15:0,48,1007	0/0:19,0:19:51.18:0,51,1138	0/0:18,0:18:42.11:0,42,834	0/0:21,0:21:57.18:0,57,1192	0/0:20,0:20:57.20:0,57,1251	0/0:25,0:25:75.26:0,75,1666	0/0:18,0:18:51.14:0,51,1053	0/0:20,0:20:54.16:0,54,1161
chr10	86750411	.	A	ACACT	13404.87	PASS	AB=0.567;AC=17;AF=0.304;AN=56;BaseQRankSum=-10.291;DP=536;FS=1.544;HRun=0;HaplotypeScore=84.5690;InbreedingCoeff=0.8949;MQ=78.46;MQ0=0;MQRankSum=-8.048;QD=62.35;ReadPosRankSum=-0.513;VQSLOD=6.1468;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:37:87.30:2299,87,0	0/0:8,0:8:24.08:0,24,455	0/0:15,0:15:30.10:0,30,551	0/0:13,0:13:19.60:0,20,638	0/0:15,0:15:45.15:0,45,854	0/0:13,0:11:33.10:0,33,594	0/0:16,0:16:45.14:0,45,822	1/1:8,14:23:63.21:1660,63,0	0/0:14,0:14:42.13:0,42,755	0/0:12,0:12:30.10:0,30,559	0/0:13,0:13:39.13:0,39,740	0/0:36,0:36:99:0,108,1982	0/0:6,0:6:18.06:0,18,342	0/0:22,0:22:66.21:0,66,1213	0/0:10,0:10:30.10:0,30,557	0/0:20,0:20:60.21:0,60,1116	0/0:37,0:37:99:0,105,1951	1/1:3,27:32:75.26:1999,75,0	1/1:5,11:17:45.12:1112,45,0	1/1:4,8:12:27.09:707,27,0	1/1:4,52:60:99:3264,123,0	0/0:15,0:15:45.14:0,45,822	0/0:11,0:11:30.10:0,30,568	0/0:31,0:31:87.23:0,87,1500	0/0:14,0:14:42.14:0,42,797	0/1:4,12:17:58.44:1085,0,58	1/1:4,11:15:42.14:1116,42,0	1/1:0,2:2:6.02:162,6,0
chr10	86751371	.	TA	T	4005.32	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.499;DP=591;FS=4.248;HRun=8;HaplotypeScore=54.4210;InbreedingCoeff=0.9950;MQ=75.74;MQ0=0;MQRankSum=-1.540;QD=25.03;ReadPosRankSum=-0.420;VQSLOD=4.2690;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,1220	0/0:6,0:6:15.05:0,15,181	0/0:16,0:16:35.69:0,36,442	0/0:8,0:8:18.01:0,18,193	0/0:28,0:28:81.24:0,81,967	0/0:22,0:23:66.07:0,66,776	0/0:16,0:16:36.10:0,36,423	1/1:1,34:35:99:948,99,0	0/0:11,0:11:30.08:0,30,351	0/0:30,0:30:75.23:0,75,906	0/0:21,0:21:60.17:0,60,715	0/0:21,0:21:60.16:0,60,709	0/0:20,0:20:57.17:0,57,687	0/0:20,0:20:60.17:0,60,713	0/0:10,0:9:30.09:0,30,362	0/0:22,0:22:57.17:0,57,689	0/0:32,0:32:87.25:0,87,1039	0/0:26,0:26:69.10:0,69,786	1/1:3,17:20:51.07:487,51,0	1/1:3,19:22:47.94:436,48,0	1/1:0,11:11:24.04:232,24,0	0/0:23,0:23:51.12:0,51,581	0/0:16,0:16:45.13:0,45,532	0/0:20,0:20:54.15:0,54,641	0/0:24,0:24:69.21:0,69,833	1/1:2,34:36:99:977,102,0	1/1:1,21:22:57.09:550,57,0	1/1:0,14:14:39.06:376,39,0
chr10	86751662	.	CCAGTT	C	1262.44	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.069;DP=612;FS=15.975;HRun=0;HaplotypeScore=137.6672;InbreedingCoeff=0.9822;MQ=74.22;MQ0=0;MQRankSum=-7.748;QD=42.08;ReadPosRankSum=1.882;VQSLOD=2.8415;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:62.81:1357,63,0	0/0:5,0:5:15.05:0,15,463	0/0:20,0:19:54.14:0,54,1387	0/0:19,0:17:41.86:0,42,925	0/0:19,0:19:57.20:0,57,1699	0/0:20,0:20:60.21:0,60,1928	0/0:26,0:26:78.27:0,78,2519	0/0:25,0:25:69.63:0,70,1815	0/0:25,0:25:75.26:0,75,2429	0/0:18,0:18:48.16:0,48,1517	0/0:15,0:15:45.14:0,45,1367	0/0:34,0:34:99:0,99,2901	0/0:17,0:17:51.18:0,51,1658	0/0:24,0:24:72.25:0,72,2240	0/0:30,0:30:90.31:0,90,2881	0/0:21,0:21:63.20:0,63,1927	0/0:40,0:40:99:0,120,3770	0/0:24,0:24:72.25:0,72,2274	0/0:18,0:18:44.84:0,45,1366	0/0:11,0:11:27.07:0,27,794	0/0:32,0:32:90.29:0,90,2682	0/0:20,0:20:60.19:0,60,1745	0/0:18,0:18:48.16:0,48,1530	0/0:29,0:29:87.30:0,87,2772	0/0:11,0:11:33.09:0,33,920	0/0:31,0:31:93.32:0,93,2807	0/0:21,0:21:63.20:0,63,1946	0/0:9,0:9:27.07:0,27,802
chr10	86753284	.	TCTG	T	52.09	PASS	AB=0.971;AC=8;AF=0.364;AN=22;BaseQRankSum=3.543;DP=488;FS=0.000;HRun=0;HaplotypeScore=75.6607;InbreedingCoeff=0.3940;MQ=75.60;MQ0=10;MQRankSum=-1.331;QD=0.47;ReadPosRankSum=-0.217;VQSLOD=1.2535;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	1/1:24,8:32:3.01:38,3,0	./.	0/0:20,0:20:18.01:0,18,282	./.	./.	0/0:29,0:29:10.36:0,10,525	0/0:17,0:17:23.98:0,24,331	0/0:27,0:27:21.07:0,21,389	0/0:30,0:30:24.04:0,24,384	0/1:19,0:19:15.26:15,0,245	0/1:31,2:33:40.22:40,0,502	./.	./.	./.	./.	./.	./.	0/0:38,0:38:57.19:0,57,1026	./.	./.	1/1:16,0:20:6.39:41,6,0	1/1:7,0:8:2.98:21,3,0
chr10	86754607	.	AAAAAG	A	1851.94	PASS	AB=0.983;AC=18;AF=0.321;AN=56;BaseQRankSum=5.015;DP=551;FS=17.955;HRun=0;HaplotypeScore=111.3539;InbreedingCoeff=0.4635;MQ=55.34;MQ0=18;MQRankSum=-3.703;QD=7.95;ReadPosRankSum=-3.913;VQSLOD=-0.2016;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:18.59:0,19,50	0/0:4,0:4:2.72:0,3,12	0/0:12,0:7:12.88:0,13,202	0/1:14,0:7:10.33:29,0,10	0/0:30,0:28:74.46:0,74,1422	0/0:13,0:11:17.94:0,18,293	0/0:29,0:27:68.87:0,69,1261	1/1:22,3:23:14.46:308,14,0	0/0:15,0:15:42.01:0,42,814	0/1:22,0:21:97.59:98,0,136	0/1:19,0:19:60.70:61,0,62	0/0:26,0:25:66.09:0,66,1210	0/0:14,0:14:35.98:0,36,633	0/0:17,0:16:38.20:0,38,824	0/0:20,0:20:57.09:0,57,1094	0/0:20,0:20:53.56:0,54,978	0/1:33,0:32:99:132,0,154	0/1:25,0:24:61.57:62,0,118	1/1:15,1:16:33.08:250,33,0	1/1:25,2:26:35.80:268,36,0	0/1:8,1:9:58.88:124,0,59	0/0:19,0:19:37.69:0,38,647	0/0:16,0:16:35.15:0,35,741	0/0:24,0:23:66.11:0,66,1436	0/0:26,0:23:50.19:0,50,912	1/1:17,0:16:13.48:216,13,0	1/1:19,2:19:49.72:419,50,0	1/1:3,2:5:5.99:76,6,0
chr10	86754608	.	AAAAG	A	3018.33	PASS	AB=0.951;AC=23;AF=0.411;AN=56;BaseQRankSum=7.520;DP=559;FS=9.518;HRun=0;HaplotypeScore=99.5496;InbreedingCoeff=0.5776;MQ=55.53;MQ0=18;MQRankSum=-3.023;QD=11.30;ReadPosRankSum=-1.868;VQSLOD=1.7422;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:29:29.90:101,30,0	1/1:4,0:4:0.89:2,1,0	0/0:15,0:10:4.76:0,5,187	0/1:14,0:7:12.40:12,0,24	0/0:32,0:30:80.05:0,80,1250	0/0:15,0:13:23.81:0,24,300	0/0:29,0:27:62.30:0,62,1094	1/1:21,4:23:45.74:454,46,0	0/0:15,0:15:42.09:0,42,738	0/1:22,0:21:12.60:158,0,13	1/1:18,0:18:21.67:121,22,0	0/0:26,0:25:66.12:0,66,1030	0/0:14,0:14:35.94:0,36,561	0/0:17,0:16:37.29:0,37,668	0/0:20,0:20:56.59:0,57,942	0/0:20,0:20:54.01:0,54,839	0/1:31,4:34:16.31:347,0,16	0/1:23,1:23:23.66:156,0,24	1/1:5,11:16:38.95:378,39,0	1/1:6,21:26:38.03:333,38,0	0/1:8,1:9:46.14:120,0,46	0/0:21,0:21:27.45:0,27,623	0/0:16,0:16:23.72:0,24,596	0/0:25,0:23:66.12:0,66,1224	0/0:27,0:24:49.69:0,50,785	1/1:3,13:15:32.43:397,32,0	1/1:15,6:19:53.96:557,54,0	1/1:4,1:5:6.02:83,6,0
chr10	86754609	.	AAAG	A	3664.07	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=8.267;DP=563;FS=2.592;HRun=0;HaplotypeScore=89.6842;InbreedingCoeff=0.8135;MQ=55.75;MQ0=18;MQRankSum=-3.425;QD=13.57;ReadPosRankSum=-2.117;VQSLOD=3.1316;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:31:39.02:239,39,0	1/1:4,0:4:2.90:16,3,0	0/0:16,0:11:7.71:0,8,191	0/1:14,0:7:5.26:5,0,30	0/0:31,0:29:79.77:0,80,1037	0/0:15,0:13:23.73:0,24,265	0/0:29,0:27:15.95:0,16,858	1/1:24,0:22:45.51:381,46,0	0/0:15,0:15:42.10:0,42,646	1/1:23,1:23:49.34:362,49,0	1/1:18,1:19:38.17:262,38,0	0/0:26,0:25:65.71:0,66,834	0/0:14,0:14:35.53:0,36,465	0/0:18,0:17:39.52:0,40,560	0/0:20,0:20:55.12:0,55,795	0/0:20,0:20:53.88:0,54,687	1/1:33,2:34:51.99:586,52,0	1/1:22,2:23:37.01:288,37,0	1/1:15,1:16:37.96:290,38,0	1/1:27,0:26:36.65:273,37,0	0/1:9,0:9:33.46:115,0,33	0/0:22,0:22:46.30:0,46,605	0/0:17,0:17:9:0,9,476	0/0:24,0:22:66.14:0,66,1021	0/0:26,0:23:49.07:0,49,659	1/1:16,0:15:38.61:330,39,0	1/1:20,0:18:53.81:455,54,0	1/1:5,0:5:6.01:61,6,0
chr10	86754610	.	AAG	A	4270.29	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=8.153;DP=567;FS=2.533;HRun=0;HaplotypeScore=80.0047;InbreedingCoeff=0.8170;MQ=56.20;MQ0=18;MQRankSum=-3.516;QD=15.76;ReadPosRankSum=-2.211;VQSLOD=4.4189;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:30,1:29:39.97:409,40,0	1/1:1,3:4:3.01:39,3,0	0/0:17,0:12:10.61:0,11,200	0/1:15,0:8:10.64:11,0,27	0/0:33,0:31:77.47:0,77,845	0/0:15,0:13:23.64:0,24,227	0/0:29,0:27:36.90:0,37,688	1/1:26,0:24:52.09:408,52,0	0/0:16,0:16:45.05:0,45,544	1/1:19,6:24:60.29:538,60,0	1/1:2,17:19:38.48:315,38,0	0/0:26,0:25:60.81:0,61,631	0/0:15,0:15:33.79:0,34,392	0/0:18,0:17:36.34:0,36,425	0/0:19,0:19:46.45:0,46,631	0/0:20,0:20:52.54:0,53,525	1/1:31,4:34:74.97:707,75,0	1/1:20,5:24:56.26:453,56,0	1/1:16,0:16:37.32:267,37,0	1/1:27,0:26:34.76:247,35,0	0/1:8,0:8:21.18:111,0,21	0/0:21,0:21:50.21:0,50,530	0/0:17,0:17:20.39:0,20,380	0/0:24,0:22:65.92:0,66,815	0/0:26,0:23:48.30:0,48,543	1/1:16,0:15:38.73:309,39,0	1/1:20,0:18:53.58:407,54,0	1/1:4,0:4:5.99:49,6,0
chr10	86754611	.	AG	A	3831.79	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=7.651;DP=554;FS=7.609;HRun=1;HaplotypeScore=71.5333;InbreedingCoeff=0.8553;MQ=56.94;MQ0=18;MQRankSum=-4.268;QD=15.33;ReadPosRankSum=-2.599;VQSLOD=2.1896;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:28:39.21:226,39,0	1/1:3,0:3:2.99:24,3,0	0/0:16,1:12:10.13:0,10,189	0/0:16,0:9:1.74:0,2,70	0/0:33,0:31:64.02:0,64,638	0/0:13,0:11:23.71:0,24,191	0/0:29,0:27:48.65:0,49,502	1/1:25,1:24:53.39:405,53,0	0/0:16,0:16:45.02:0,45,438	1/1:24,2:25:66.29:565,66,0	1/1:18,0:18:38.54:267,39,0	0/0:26,0:25:47.33:0,47,471	0/0:15,0:15:14.22:0,14,304	0/0:16,1:16:20:0,20,304	0/0:19,0:19:53.71:0,54,472	0/0:19,0:19:31.30:0,31,357	1/1:35,0:34:85.55:646,86,0	1/1:24,1:24:56.21:411,56,0	1/1:13,0:14:37.32:252,37,0	1/1:26,0:25:34.34:228,34,0	0/1:8,0:8:10.04:113,0,10	0/0:21,0:21:52.24:0,52,443	0/0:16,0:16:18.04:0,18,274	0/0:24,0:22:64.01:0,64,614	0/0:23,0:20:44.24:0,44,435	1/1:15,1:15:38.72:289,39,0	1/1:20,0:18:52.01:368,52,0	1/1:3,0:3:5.91:38,6,0
chr10	86756245	.	G	GT	1214.77	PASS	AB=0.910;AC=32;AF=0.571;AN=56;BaseQRankSum=2.621;DP=561;FS=7.237;HRun=19;HaplotypeScore=101.6840;InbreedingCoeff=0.3145;MQ=57.09;MQ0=34;MQRankSum=-0.155;QD=3.14;ReadPosRankSum=0.238;VQSLOD=-0.6952;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:25.50:0,26,133	1/1:16,0:16:12.67:79,13,0	0/0:37,0:8:1.98:0,2,9	0/0:43,1:10:1.78:0,2,9	0/0:20,0:21:2.62:0,3,42	0/1:19,0:18:44.91:49,0,45	0/1:12,0:11:4.16:14,0,4	1/1:31,0:29:20.52:95,21,0	0/0:13,0:11:13.83:0,14,62	1/1:23,0:20:32.90:122,33,0	1/1:16,0:15:27.66:111,28,0	0/1:10,1:11:3.21:23,0,3	0/1:15,0:15:15.91:19,0,16	0/1:17,0:18:18.87:34,0,19	0/0:19,0:16:13.34:0,13,46	0/0:10,2:12:6.30:0,6,27	1/1:33,0:28:28.53:113,29,0	1/1:15,1:13:6.41:30,6,0	1/1:29,0:25:13.63:55,14,0	1/1:24,2:26:34.36:153,34,0	1/1:16,0:15:12.56:48,13,0	0/0:7,0:6:3.82:0,4,11	0/1:2,6:8:5.51:22,0,6	0/1:15,1:14:19.83:24,0,20	0/1:15,1:18:22.12:58,0,22	1/1:31,0:28:32.93:133,33,0	1/1:21,0:19:24.86:112,25,0	1/1:10,1:11:19.67:98,20,0
chr10	86756251	.	T	TG	629.95	PASS	AB=0.791;AC=7;AF=0.125;AN=56;BaseQRankSum=3.700;DP=585;FS=11.649;HRun=0;HaplotypeScore=105.7590;InbreedingCoeff=0.2699;MQ=50.82;MQ0=49;MQRankSum=-1.863;QD=5.48;ReadPosRankSum=4.639;VQSLOD=2.8029;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:18:31.83:55,0,32	0/1:9,7:16:89.02:89,0,101	0/0:48,0:8:10.93:0,11,107	0/0:51,0:8:6.25:0,6,61	0/0:22,0:20:53.76:0,54,496	0/0:21,0:19:47.72:0,48,425	0/0:10,0:9:23.11:0,23,191	0/0:30,0:27:72.15:0,72,515	0/0:14,0:12:35.63:0,36,354	1/1:13,10:19:9.62:257,10,0	0/1:8,9:16:1.30:175,0,1	0/0:10,0:10:29.05:0,29,223	0/0:15,0:15:39.12:0,39,318	0/0:18,0:18:44.67:0,45,383	0/0:21,0:17:43.81:0,44,406	0/0:10,0:10:26.95:0,27,252	0/1:14,16:25:19.87:178,0,20	0/0:21,0:16:36.50:0,36,258	0/0:24,0:20:55.53:0,56,390	0/0:27,0:27:67.99:0,68,440	0/0:17,0:15:41.13:0,41,287	0/0:10,0:9:26.96:0,27,233	0/1:9,0:8:3.70:4,0,66	0/0:16,0:14:30:0,30,255	0/0:18,0:18:44.26:0,44,370	0/0:30,0:27:72.15:0,72,482	0/0:20,0:18:29.40:0,29,205	0/0:17,0:12:23.26:0,23,139
chr10	86756253	.	T	TG	1920.77	PASS	AB=0.871;AC=9;AF=0.161;AN=56;BaseQRankSum=-8.713;DP=591;FS=32.782;HRun=0;HaplotypeScore=102.2259;InbreedingCoeff=0.0912;MQ=50.15;MQ0=51;MQRankSum=5.347;QD=10.27;ReadPosRankSum=1.951;VQSLOD=2.1065;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:20:6.94:7,0,77	0/0:16,0:16:47.09:0,47,330	0/0:54,0:9:12.99:0,13,110	0/0:53,0:8:1.73:0,2,60	0/0:22,0:20:53.46:0,53,471	0/0:21,0:19:50.73:0,51,453	0/0:9,0:8:19.96:0,20,164	0/1:25,5:27:91.12:374,0,91	0/0:14,0:12:35.25:0,35,353	0/0:22,0:18:52.65:0,53,399	0/0:16,0:15:42.59:0,43,287	0/0:10,0:10:29.15:0,29,227	0/0:15,0:15:37.95:0,38,316	0/0:17,0:17:44.66:0,45,380	0/0:20,0:16:40.81:0,41,378	0/0:10,0:10:26.93:0,27,249	0/0:31,0:26:55.20:0,55,370	0/0:21,0:16:32.93:0,33,267	0/1:23,2:21:66.89:218,0,67	0/1:22,6:27:28.35:413,0,28	0/1:14,1:13:4.13:191,0,4	0/0:11,0:10:24.60:0,25,189	0/0:9,0:8:10.32:0,10,83	0/0:15,0:13:27.08:0,27,242	0/0:18,0:18:44.27:0,44,374	0/1:21,8:26:27.95:404,0,28	0/1:14,6:18:16.07:296,0,16	1/1:15,3:13:8.37:156,8,0
chr10	86756256	.	T	TTG	890.99	PASS	AB=0.769;AC=7;AF=0.125;AN=56;BaseQRankSum=4.386;DP=603;FS=12.355;HRun=0;HaplotypeScore=116.8747;InbreedingCoeff=0.4579;MQ=49.77;MQ0=53;MQRankSum=-4.572;QD=6.27;ReadPosRankSum=4.846;VQSLOD=1.9963;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:48.45:0,48,550	0/1:7,7:14:66.71:155,0,67	0/0:58,0:9:10.68:0,11,83	0/1:58,0:10:17.44:17,0,45	0/0:22,0:20:34.06:0,34,419	0/0:20,0:18:45.66:0,46,413	0/0:9,0:8:17.99:0,18,170	0/0:32,0:29:79.99:0,80,740	0/0:13,0:11:32.07:0,32,329	1/1:12,10:18:15.10:346,15,0	0/1:7,9:15:5.49:209,0,5	0/0:10,0:10:29.85:0,30,260	0/0:14,0:14:35.11:0,35,290	0/0:17,0:17:41.95:0,42,382	0/0:20,0:16:37.77:0,38,351	0/0:10,0:10:22.25:0,22,215	1/1:16,16:27:3.16:293,3,0	0/0:21,0:16:30.29:0,30,233	0/0:23,0:19:43.70:0,44,371	0/0:29,0:28:74.70:0,75,606	0/0:15,0:13:19.85:0,20,228	0/0:11,0:10:29.93:0,30,264	0/0:9,0:8:8.99:0,9,89	0/0:15,0:13:21.84:0,22,208	0/0:20,0:20:31.20:0,31,321	0/0:30,0:27:75.45:0,75,604	0/0:22,0:20:44.43:0,44,352	0/0:19,0:14:28.44:0,28,205
chr10	86756303	.	GA	G	1262.46	PASS	AB=0.819;AC=18;AF=0.321;AN=56;BaseQRankSum=-1.432;DP=418;FS=0.480;HRun=13;HaplotypeScore=84.3207;InbreedingCoeff=0.3445;MQ=77.46;MQ0=5;MQRankSum=-0.689;QD=6.41;ReadPosRankSum=0.866;VQSLOD=2.6341;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:17:32.84:0,33,292	0/0:5,0:10:20.05:0,20,106	0/0:43,0:14:16.75:0,17,121	0/1:43,0:23:8.98:9,0,30	0/0:13,2:16:1.95:0,2,161	0/1:6,2:8:1.39:1,0,134	0/1:8,2:10:13.80:14,0,191	0/1:8,14:26:22.63:249,0,23	0/0:10,0:10:20.82:0,21,178	0/0:5,0:11:20.50:0,21,109	0/0:6,0:14:29.45:0,29,181	0/1:7,1:8:4.44:4,0,115	0/1:9,0:9:11.56:12,0,119	0/0:11,0:11:29.76:0,30,266	0/0:7,0:7:10.26:0,10,91	0/0:12,0:12:26.94:0,27,240	0/0:12,1:21:14.67:0,15,188	0/0:7,0:15:37.36:0,37,208	1/1:5,7:12:5.04:138,5,0	1/1:6,9:15:26.48:185,26,0	0/1:3,2:5:12.90:13,0,44	0/0:9,0:9:21.50:0,22,203	0/0:6,0:6:12.01:0,12,112	0/1:6,1:9:11.77:12,0,99	0/0:12,0:14:38.63:0,39,327	1/1:6,10:16:32.77:238,33,0	1/1:4,15:20:22.06:292,22,0	1/1:3,10:14:39.87:274,40,0
chr10	86756399	.	GGTGTGTGTGTGTGTGTGTGT	G	1933.94	PASS	AB=0.907;AC=12;AF=0.222;AN=54;BaseQRankSum=1.865;DP=456;FS=0.000;HRun=0;HaplotypeScore=209.7772;InbreedingCoeff=0.3739;MQ=63.15;MQ0=31;MQRankSum=-3.657;QD=14.22;ReadPosRankSum=-1.448;VQSLOD=1.9822;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:18:23:23,0,310	0/0:2,0:2:2.99:0,3,24	./.	0/0:51,0:33:2.98:0,3,21	0/0:11,0:12:11.92:0,12,276	0/0:7,0:11:8.94:0,9,602	0/0:19,0:18:33.07:0,33,1936	1/1:26,0:26:4.67:134,5,0	0/0:13,0:15:30.06:0,30,1945	0/0:10,0:11:15:0,15,134	0/0:11,0:9:9.01:0,9,216	0/0:13,0:13:15.05:0,15,1055	0/0:12,0:10:20.99:0,21,993	0/0:17,0:17:36.08:0,36,1536	0/0:15,0:15:21.05:0,21,1167	0/0:15,0:15:36.10:0,36,2336	0/0:20,0:22:28.28:0,28,572	0/0:9,0:14:14.99:0,15,292	0/1:14,0:13:14.38:17,0,14	1/1:4,5:10:9.03:371,9,0	1/1:15,7:19:3.01:159,3,0	0/0:10,0:9:12:0,12,499	0/0:5,0:4:3.01:0,3,49	0/0:20,0:20:36.11:0,36,2183	0/0:9,0:9:9.03:0,9,711	0/1:14,1:13:2.03:189,0,2	0/1:17,9:25:41.05:1167,0,41	1/1:5,0:5:2.94:18,3,0
chr10	86757194	.	TC	T	755.19	PASS	AB=0.895;AC=13;AF=0.232;AN=56;BaseQRankSum=4.270;DP=423;FS=4.414;HRun=12;HaplotypeScore=52.9737;InbreedingCoeff=0.1085;MQ=71.47;MQ0=1;MQRankSum=1.682;QD=4.42;ReadPosRankSum=4.270;VQSLOD=0.5572;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,15:32:32.34:239,32,0	0/0:3,0:3:3.01:0,3,30	0/0:13,0:13:3.63:0,4,58	0/0:19,0:15:11.24:0,11,74	0/1:8,1:9:14.21:14,0,52	0/1:16,0:16:11.75:12,0,25	0/0:17,0:21:26.28:0,26,205	0/0:15,0:15:2.81:0,3,25	0/0:18,1:19:12.41:0,12,188	0/0:10,0:11:3.01:0,3,30	0/1:6,2:8:13.67:17,0,14	0/1:24,3:27:34.32:34,0,34	0/0:19,0:19:17.98:0,18,161	0/0:13,0:13:5.97:0,6,50	0/1:13,5:18:68.94:69,0,76	0/1:13,2:15:8.30:8,0,79	0/0:23,0:23:27:0,27,244	1/1:4,23:27:62.73:487,63,0	0/0:8,0:8:2.98:0,3,22	0/0:5,0:5:5.95:0,6,41	0/0:17,0:18:7.24:0,7,52	0/0:12,0:12:2.97:0,3,20	1/1:9,1:10:2.94:19,3,0	0/0:16,0:17:26.06:0,26,244	0/1:9,0:9:6.99:7,0,70	0/0:10,0:11:2.84:0,3,14	0/0:15,0:15:11.95:0,12,101	0/0:7,0:9:18.53:0,19,146
chr10	86758513	.	GCTCTA	G	7109.71	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=10.730;DP=285;FS=22.498;HRun=0;HaplotypeScore=65.3817;InbreedingCoeff=0.9082;MQ=92.17;MQ0=0;MQRankSum=-13.042;QD=50.07;ReadPosRankSum=1.795;VQSLOD=3.1985;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:42.14:862,42,0	1/1:1,3:4:9.03:186,9,0	0/0:19,0:19:45.15:0,45,1278	0/0:13,0:12:33.11:0,33,978	0/0:11,0:11:30.10:0,30,918	0/0:13,0:13:21.03:0,21,508	0/0:8,0:8:24.04:0,24,665	1/1:4,9:13:27.08:522,27,0	0/0:2,0:2:6.02:0,6,184	1/1:0,10:10:30.10:621,30,0	1/1:0,2:2:6.02:124,6,0	0/0:10,0:10:27.09:0,27,829	0/0:6,0:6:18.06:0,18,550	0/0:11,0:11:33.07:0,33,931	0/0:13,0:13:39.13:0,39,1197	0/0:12,0:12:30.10:0,30,921	1/1:1,17:18:42.14:869,42,0	1/1:1,11:12:33.11:683,33,0	1/1:5,14:19:42.14:870,42,0	1/1:0,8:8:24.08:496,24,0	1/1:2,5:7:6.02:100,6,0	0/0:2,0:2:6.02:0,6,184	0/0:2,0:2:6.02:0,6,184	0/0:6,0:6:18.06:0,18,552	0/0:14,0:14:39.13:0,39,1199	1/1:2,10:12:30.10:620,30,0	1/1:2,16:18:48.16:993,48,0	1/1:0,3:3:9.03:163,9,0
chr10	86758973	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAA	G	209.74	PASS	AB=0.881;AC=3;AF=0.060;AN=50;BaseQRankSum=3.498;DP=457;FS=15.381;HRun=0;HaplotypeScore=292.3097;InbreedingCoeff=0.0493;MQ=42.31;MQ0=31;MQRankSum=0.583;QD=3.44;ReadPosRankSum=1.349;VQSLOD=1.1759;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:18:9.84:0,10,60	0/0:8,0:8:6.40:0,6,49	./.	./.	0/0:19,0:19:30.15:0,30,1752	0/0:18,0:17:17.37:0,17,679	0/0:23,0:20:9.04:0,9,45	0/0:20,0:19:29.09:0,29,304	0/0:24,0:23:23.26:0,23,1390	0/1:8,10:17:29.75:215,0,30	./.	0/0:30,0:29:38.58:0,39,2372	0/0:13,0:11:23.70:0,24,338	0/0:18,0:18:25.35:0,25,1707	0/0:26,0:25:26.97:0,27,697	0/0:19,0:17:24.49:0,24,1443	0/0:10,0:8:5.58:0,6,35	0/0:12,0:9:6.52:0,7,165	0/0:6,0:6:5.46:0,5,22	0/0:19,0:18:10.41:0,10,48	0/0:14,0:12:1.72:0,2,4	0/0:13,0:13:9.92:0,10,78	0/0:15,0:13:0.46:0,0,1	0/0:33,0:28:22:0,22,1765	0/0:12,0:11:9.83:0,10,115	0/1:26,0:25:63.97:64,0,1084	0/1:17,0:17:27.15:27,0,32	0/0:11,0:9:17.70:0,18,332
chr10	86762675	.	TC	T	2178.46	PASS	AB=0.927;AC=23;AF=0.411;AN=56;BaseQRankSum=5.352;DP=389;FS=4.993;HRun=10;HaplotypeScore=47.1966;InbreedingCoeff=0.3932;MQ=77.47;MQ0=0;MQRankSum=-1.092;QD=10.04;ReadPosRankSum=2.133;VQSLOD=2.0742;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:19,2:21:15.99:16,0,286	0/0:4,0:4:9.02:0,9,100	0/1:10,0:9:27.69:28,0,55	0/1:13,0:13:14.36:14,0,69	0/1:5,1:6:11.01:11,0,118	0/1:5,1:6:11.01:11,0,118	0/1:16,1:17:18:18,0,243	1/1:9,18:27:38.95:338,39,0	0/0:10,0:10:27.06:0,27,291	0/0:13,0:13:24.06:0,24,265	0/0:8,0:8:15.04:0,15,165	0/0:21,0:21:15.93:0,16,338	0/0:16,0:16:30.05:0,30,315	0/0:11,1:12:3.95:0,4,243	0/0:9,1:10:1.02:0,1,232	0/0:22,1:24:7.63:0,8,330	0/0:13,0:13:24.06:0,24,258	1/1:2,12:14:29.98:260,30,0	1/1:6,5:11:11.99:104,12,0	1/1:2,4:6:12:104,12,0	1/1:5,25:30:62.88:547,63,0	0/0:14,2:16:1.05:0,1,231	0/0:9,0:9:24.04:0,24,248	0/1:10,1:11:11.02:11,0,110	0/0:16,0:16:24.06:0,24,266	1/1:4,7:11:23.99:207,24,0	1/1:2,20:22:50.98:442,51,0	1/1:1,11:12:29.99:260,30,0
chr10	86762714	.	TGCCCCCCTCCCA	T	979.10	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.722;DP=326;FS=0.000;HRun=0;HaplotypeScore=117.8427;InbreedingCoeff=0.7353;MQ=73.84;MQ0=0;MQRankSum=-5.297;QD=81.59;ReadPosRankSum=2.169;VQSLOD=3.2813;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39.11:0,39,2074	0/0:1,0:1:3.01:0,3,152	0/0:9,0:8:20.97:0,21,669	0/0:7,0:8:16.85:0,17,589	0/0:7,0:7:18.05:0,18,784	0/0:8,0:8:21.06:0,21,1075	0/0:21,0:21:63.22:0,63,3687	0/0:19,0:19:48.15:0,48,2310	0/0:14,0:14:42.13:0,42,2071	0/0:11,0:11:27.08:0,27,1108	0/0:5,0:5:12.03:0,12,564	0/0:11,0:11:30.07:0,30,1392	0/0:15,0:15:42.14:0,42,2115	0/0:7,0:7:18.06:0,18,1066	0/0:15,0:15:42.14:0,42,2443	0/0:14,0:14:36.12:0,36,1861	0/0:14,0:14:39.13:0,39,2231	1/1:2,10:12:30.10:1073,30,0	0/0:9,0:9:9.03:0,9,397	0/0:8,0:8:24.07:0,24,1110	0/0:23,0:23:51.17:0,51,2673	0/0:9,0:9:15.04:0,15,689	0/0:6,0:6:15.05:0,15,898	0/0:6,0:6:15.05:0,15,898	0/0:13,0:13:27.09:0,27,1572	0/0:12,0:11:30.10:0,30,1689	0/0:24,0:24:66.03:0,66,3134	0/0:11,0:11:30.10:0,30,1711
chr10	86763394	.	AC	A	5263.71	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.179;DP=690;FS=6.954;HRun=1;HaplotypeScore=65.7907;InbreedingCoeff=0.9979;MQ=94.54;MQ0=0;MQRankSum=-2.350;QD=39.28;ReadPosRankSum=1.848;VQSLOD=5.4836;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,46:46:99:1719,123,0	1/1:0,9:9:27.09:377,27,0	0/0:29,0:29:48.79:0,49,1086	0/0:33,0:33:95.59:0,96,1503	0/0:26,0:26:75.26:0,75,1189	0/0:23,0:23:66.22:0,66,1043	0/0:29,0:29:84.29:0,84,1334	0/0:25,0:25:75.25:0,75,1167	0/0:25,0:25:75.23:0,75,1173	1/1:0,26:26:78.25:1070,78,0	1/1:0,19:19:57.19:797,57,0	0/0:39,0:39:99:0,117,1868	0/0:23,0:23:69.20:0,69,1046	0/0:28,0:28:84.29:0,84,1335	0/0:23,0:23:69.24:0,69,1102	0/0:25,0:25:75.22:0,75,1137	1/1:0,34:34:93.31:1301,93,0	0/0:21,0:20:63.17:0,63,947	0/0:24,0:24:69.23:0,69,1095	0/0:18,0:18:51.16:0,51,785	0/0:45,0:45:99:0,135,2125	0/0:17,0:17:51.17:0,51,815	0/0:14,0:14:42.14:0,42,659	0/0:24,0:24:72.21:0,72,1085	0/0:14,0:14:42.14:0,42,671	0/0:28,1:29:45.32:0,45,1286	0/0:16,0:16:48.16:0,48,760	0/0:6,0:6:18.06:0,18,288
chr10	86764348	.	TACAGACAG	T	976.37	PASS	AB=0.636;AC=1;AF=0.018;AN=56;BaseQRankSum=6.183;DP=712;FS=6.541;HRun=0;HaplotypeScore=202.5051;InbreedingCoeff=0.3372;MQ=73.60;MQ0=0;MQRankSum=-4.221;QD=27.90;ReadPosRankSum=0.843;VQSLOD=2.8103;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,20:35:5.63:1051,0,6	0/0:10,0:10:24.08:0,24,982	0/0:29,0:27:52.89:0,53,1872	0/0:36,0:37:60.44:0,60,2598	0/0:20,0:20:39.13:0,39,1645	0/0:22,0:22:54.19:0,54,2240	0/0:34,0:34:84.27:0,84,3217	0/0:29,0:29:57.18:0,57,2259	0/0:19,0:19:54.19:0,54,2281	0/0:27,0:27:66.23:0,66,2408	0/0:13,0:13:27.09:0,27,1053	0/0:43,0:43:99:0,117,4857	0/0:21,0:21:57.20:0,57,2412	0/0:24,0:24:63.22:0,63,2608	0/0:16,0:16:42.14:0,42,1664	0/0:13,0:13:36.12:0,36,1452	0/0:43,0:43:99:0,113,4483	0/0:29,0:29:78.27:0,78,3290	0/0:19,0:19:36.12:0,36,1405	0/0:16,0:16:42.14:0,42,1648	0/0:45,0:45:99:0,120,4669	0/0:21,0:21:51.16:0,51,2014	0/0:23,0:23:51.17:0,51,2079	0/0:44,0:44:99:0,105,4178	0/0:11,0:11:33.11:0,33,1348	0/0:28,0:28:75.25:0,75,2916	0/0:19,0:17:51.18:0,51,2149	0/0:22,0:22:60.21:0,60,2549
chr10	86764376	.	C	CAGTA	8514.54	PASS	AB=0.941;AC=11;AF=0.196;AN=56;BaseQRankSum=-7.661;DP=716;FS=6.342;HRun=0;HaplotypeScore=133.5957;InbreedingCoeff=0.8862;MQ=73.58;MQ0=0;MQRankSum=-4.753;QD=49.50;ReadPosRankSum=1.900;VQSLOD=5.9281;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,39:43:74.78:2164,75,0	1/1:0,11:13:30.10:861,30,0	0/0:26,0:25:69.21:0,69,1270	0/0:30,0:31:53.88:0,54,1473	0/0:20,0:20:36.12:0,36,734	0/0:20,0:20:57.19:0,57,1162	0/0:36,0:36:96.33:0,96,1992	0/0:29,0:29:72.24:0,72,1384	0/0:23,0:23:66.23:0,66,1382	1/1:2,19:23:69.20:1837,69,0	1/1:2,15:18:23.95:695,24,0	0/0:42,0:42:99:0,123,2557	0/0:24,0:24:66.23:0,66,1377	0/0:21,0:21:63.22:0,63,1316	0/0:12,0:12:36.11:0,36,717	0/0:15,0:15:45.15:0,45,922	1/1:3,37:43:99:2861,99,0	0/0:26,0:26:78.27:0,78,1632	0/0:19,0:19:51.09:0,51,980	0/0:19,0:19:42.14:0,42,861	0/0:40,0:40:99:0,111,2286	0/0:17,0:17:42.14:0,42,861	0/0:30,0:30:66.23:0,66,1346	0/0:38,0:38:99:0,114,2262	0/0:19,0:19:48.16:0,48,1004	0/1:30,2:32:95.72:96,0,1428	0/0:17,0:15:51.18:0,51,1068	0/0:20,0:20:57.20:0,57,1192
chr10	86764883	.	TTCATGGTC	T	4311.99	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.284;DP=630;FS=0.530;HRun=0;HaplotypeScore=160.6781;InbreedingCoeff=0.9917;MQ=87.42;MQ0=0;MQRankSum=-11.520;QD=40.68;ReadPosRankSum=1.211;VQSLOD=4.4617;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,25:39:44.40:1205,44,0	1/1:3,8:11:21.07:563,21,0	0/0:25,0:25:53.99:0,54,1790	0/0:25,0:25:60.16:0,60,2240	0/0:19,0:19:51.18:0,51,2185	0/0:19,0:19:57.20:0,57,2421	0/0:29,0:29:75.26:0,75,3189	0/0:32,0:32:81.28:0,81,3256	0/0:20,0:20:48.15:0,48,1953	1/1:3,15:18:45.15:1187,45,0	1/1:3,10:13:12.04:311,12,0	0/0:29,0:29:87.30:0,87,3647	0/0:19,0:19:48.16:0,48,1917	0/0:16,0:16:42.14:0,42,1799	0/0:22,0:22:54.19:0,54,2286	0/0:24,0:24:66.21:0,66,2587	1/1:7,18:25:39.13:1046,39,0	0/0:27,0:27:72.20:0,72,2978	0/0:25,0:25:51.17:0,51,2014	0/0:15,0:15:39.13:0,39,1591	0/0:46,0:46:99:0,135,5537	0/0:15,0:15:39.13:0,39,1632	0/0:13,0:13:36.12:0,36,1434	0/0:32,0:32:93.30:0,93,3853	0/0:17,0:17:36.12:0,36,1541	0/0:21,0:21:54.19:0,54,2247	0/0:17,0:17:51.18:0,51,2063	0/0:17,0:17:45.15:0,45,1928
chr10	86766779	.	C	CT	5507.33	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-11.974;DP=700;FS=0.765;HRun=0;HaplotypeScore=72.9998;InbreedingCoeff=0.9996;MQ=77.80;MQ0=1;MQRankSum=-2.284;QD=43.71;ReadPosRankSum=0.836;VQSLOD=5.1908;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,39:39:99:1771,111,0	1/1:0,11:11:30.10:478,30,0	0/0:24,0:24:63.14:0,63,842	0/0:22,0:22:57.16:0,57,765	0/0:24,0:24:63.17:0,63,858	0/0:34,0:34:99:0,99,1347	0/0:27,0:27:78.24:0,78,1071	0/0:22,0:22:66.21:0,66,908	0/0:26,0:26:78.24:0,78,1057	1/1:3,19:22:60.18:918,60,0	1/1:1,15:17:42.14:669,42,0	0/0:41,0:41:99:0,120,1645	0/0:15,0:15:45.15:0,45,629	0/0:30,0:30:84.27:0,84,1155	0/0:31,0:31:90.29:0,90,1243	0/0:26,0:26:78.22:0,78,1069	1/1:3,33:36:99:1671,105,0	0/0:28,0:28:84.28:0,84,1170	0/0:14,0:14:39.11:0,39,512	0/0:18,0:18:51.16:0,51,696	0/0:52,0:52:99:0,150,2060	0/0:12,0:12:30.10:0,30,418	0/0:12,0:12:30.10:0,30,419	0/0:26,0:25:69.18:0,69,927	0/0:18,0:18:54.18:0,54,755	0/0:30,0:30:36.06:0,36,1070	0/0:25,0:25:75.23:0,75,1030	0/0:17,0:17:51.17:0,51,711
chr10	86766932	.	CT	C	684.29	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.629;DP=745;FS=11.750;HRun=2;HaplotypeScore=73.4392;InbreedingCoeff=0.9964;MQ=74.72;MQ0=0;MQRankSum=-2.566;QD=28.51;ReadPosRankSum=2.378;VQSLOD=2.1178;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1934	0/0:8,0:8:24.08:0,24,359	0/0:11,0:11:30.03:0,30,383	0/0:15,0:15:39.07:0,39,497	0/0:31,0:31:90.28:0,90,1303	0/0:23,0:23:69.23:0,69,1034	0/0:34,0:34:99:0,102,1521	0/0:34,0:34:96.30:0,96,1381	0/0:39,0:39:99:0,117,1751	0/0:23,0:23:69.22:0,69,1015	0/0:9,0:9:27.05:0,27,380	0/0:43,0:43:99:0,129,1914	0/0:26,0:26:78.26:0,78,1167	0/0:30,0:30:90.28:0,90,1311	0/0:23,0:23:69.23:0,69,1034	0/0:22,0:22:66.22:0,66,988	0/0:37,0:37:99:0,111,1660	1/1:0,24:24:60.20:779,60,0	0/0:19,0:19:57.19:0,57,854	0/0:26,0:26:78.26:0,78,1160	0/0:44,0:44:99:0,132,1955	0/0:17,0:17:51.16:0,51,746	0/0:26,0:26:75.25:0,75,1106	0/0:39,0:39:99:0,117,1754	0/0:24,0:24:72.24:0,72,1079	0/0:32,0:32:90.19:0,90,1280	0/0:27,0:27:81.24:0,81,1188	0/0:14,0:14:42.14:0,42,626
chr10	86767036	.	TG	T	2297.90	PASS	AB=0.852;AC=24;AF=0.429;AN=56;BaseQRankSum=6.664;DP=547;FS=3.539;HRun=11;HaplotypeScore=74.2429;InbreedingCoeff=0.5450;MQ=67.40;MQ0=0;MQRankSum=0.681;QD=10.03;ReadPosRankSum=-0.032;VQSLOD=2.9980;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:29:17.13:0,17,88	1/1:4,2:6:2.98:25,3,0	0/1:12,0:10:14.52:16,0,15	0/1:8,1:7:15.40:15,0,31	0/1:8,1:9:6.24:6,0,106	0/0:13,0:13:6.02:0,6,64	0/0:39,2:42:21.98:0,22,651	0/1:5,9:15:5.66:152,0,6	0/0:23,0:24:47.92:0,48,473	1/1:8,10:18:32.93:267,33,0	1/1:5,5:10:16.79:128,17,0	0/0:34,0:34:51.10:0,51,523	0/0:21,0:21:45.06:0,45,448	0/0:27,1:28:23.46:0,23,446	0/0:19,0:19:33.05:0,33,331	0/0:29,1:30:38.50:0,38,601	1/1:15,14:29:50.81:408,51,0	0/0:6,0:16:23.18:0,23,152	0/1:9,6:15:12:109,0,12	1/1:4,6:10:8.97:74,9,0	1/1:17,25:42:74.85:614,75,0	0/0:17,0:17:21.49:0,21,205	0/1:8,0:8:15.54:16,0,55	0/0:34,0:35:72.15:0,72,752	0/0:10,0:10:15:0,15,138	1/1:7,10:17:26.96:221,27,0	1/1:3,16:20:43.88:351,44,0	1/1:3,6:9:11.98:99,12,0
chr10	86768873	.	T	TAC	20250.56	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-6.622;DP=1198;FS=3.257;HRun=0;HaplotypeScore=162.1997;InbreedingCoeff=0.9989;MQ=65.20;MQ0=5;MQRankSum=-4.014;QD=38.06;ReadPosRankSum=3.925;VQSLOD=5.8085;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,38:49:86.31:1521,86,0	1/1:2,8:10:18.06:305,18,0	0/0:63,0:57:88.81:0,89,1308	0/0:51,0:45:78.72:0,79,1088	0/0:27,0:27:72.20:0,72,906	0/0:25,0:25:66.13:0,66,857	0/0:42,0:42:96.28:0,96,1218	1/1:4,47:52:99:2039,132,0	0/0:51,0:51:99:0,141,1815	1/1:10,47:58:99:2408,111,0	1/1:5,27:32:69.24:1172,69,0	0/0:59,0:59:99:0,164,2111	0/0:32,0:32:87.27:0,87,1116	0/0:32,0:32:87.24:0,87,1088	0/0:63,0:63:99:0,172,2179	0/0:65,0:65:99:0,162,2074	1/1:15,29:43:99:1673,102,0	1/1:4,35:39:84.29:1427,84,0	1/1:4,15:19:48.10:757,48,0	1/1:1,33:33:90.31:1530,90,0	1/1:11,87:98:99:3456,195,0	0/0:41,0:41:99:0,117,1505	0/0:32,0:32:84.24:0,84,1063	0/0:52,0:52:99:0,132,1667	0/0:30,0:30:75.20:0,75,932	1/1:2,43:45:99:2073,129,0	1/1:3,28:31:78.27:1326,78,0	1/1:7,12:17:33.11:561,33,0
chr10	86769013	.	GCA	G	4972.22	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.126;DP=1075;FS=1.089;HRun=0;HaplotypeScore=137.4022;InbreedingCoeff=0.9995;MQ=59.32;MQ0=2;MQRankSum=-0.286;QD=31.27;ReadPosRankSum=2.096;VQSLOD=6.6505;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,43:52:99:1561,120,0	1/1:1,10:11:24.08:312,24,0	0/0:46,0:40:82.38:0,82,1368	0/0:31,0:24:47.99:0,48,757	0/0:22,0:22:63.20:0,63,1044	0/0:23,0:23:59.79:0,60,980	0/0:33,0:33:57.18:0,57,943	0/0:35,0:35:84.29:0,84,1427	0/0:48,0:48:99:0,129,2167	1/1:7,28:35:93.29:1190,93,0	1/1:1,16:17:45.15:585,45,0	0/0:56,0:56:99:0,153,2518	0/0:33,0:33:84.26:0,84,1371	0/0:41,0:41:99:0,105,1700	0/0:59,0:59:99:0,160,2663	0/0:44,0:43:99:0,123,1955	1/1:5,38:43:96.26:1324,96,0	0/0:60,0:60:99:0,149,2363	0/0:27,0:27:72.25:0,72,1222	0/0:17,0:17:51.17:0,51,867	0/0:98,0:98:99:0,259,4271	0/0:34,0:34:87.28:0,87,1448	0/0:20,0:20:57.20:0,57,969	0/0:52,0:52:99:0,132,2201	0/0:26,0:26:58.94:0,59,1081	0/0:47,2:49:73.65:0,74,2156	0/0:37,0:37:99:0,105,1723	0/0:24,0:24:63.22:0,63,1064
chr10	86770686	.	TACACACACACACACACACACACAC	T	2570.71	PASS	AB=0.886;AC=9;AF=0.167;AN=54;BaseQRankSum=6.727;DP=487;FS=4.919;HRun=0;HaplotypeScore=257.0189;InbreedingCoeff=0.7010;MQ=61.65;MQ0=15;MQRankSum=-3.175;QD=28.88;ReadPosRankSum=-1.068;VQSLOD=2.1648;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:25:6.02:323,6,0	1/1:3,2:5:6.02:375,6,0	./.	0/0:23,0:16:3.01:0,3,44	0/0:6,0:5:12.04:0,12,1213	0/0:10,0:11:21.07:0,21,1710	0/0:28,0:29:21.07:0,21,922	0/0:20,0:20:15.05:0,15,341	0/0:9,0:9:12.04:0,12,985	1/1:9,8:15:18.88:865,19,0	1/1:6,4:11:15.01:615,15,0	0/0:16,0:16:21.07:0,21,1790	0/0:9,0:9:9.34:0,9,663	0/0:17,0:19:33.11:0,33,2305	0/0:16,0:16:30.10:0,30,2692	0/0:16,0:14:24.08:0,24,2040	0/1:27,4:31:99:541,0,105	0/0:11,0:14:34.67:0,35,2301	0/0:15,0:14:15.05:0,15,1153	0/0:9,0:9:12.04:0,12,804	0/0:28,0:30:30.08:0,30,1697	0/0:22,0:22:27.09:0,27,1994	0/0:10,0:10:15.05:0,15,1072	0/0:32,0:32:45.12:0,45,4219	0/0:19,0:20:27.09:0,27,2020	0/0:25,0:24:51.18:0,51,3832	0/0:10,0:14:14.26:0,14,821	0/0:7,0:8:9.03:0,9,619
chr10	86777416	.	A	AGATG	5740.55	PASS	AB=0.789;AC=22;AF=0.393;AN=56;BaseQRankSum=4.903;DP=703;FS=1.227;HRun=0;HaplotypeScore=116.1690;InbreedingCoeff=0.8256;MQ=67.15;MQ0=3;MQRankSum=0.214;QD=20.43;ReadPosRankSum=-4.859;VQSLOD=3.8596;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:77.95:0,78,971	1/1:5,0:5:3.01:61,3,0	0/0:24,0:22:36.05:0,36,372	0/0:19,0:17:13.62:0,14,262	0/0:30,0:30:80.89:0,81,980	0/1:25,0:25:99:272,0,197	0/0:16,0:16:32.98:0,33,304	1/1:45,0:42:78.26:632,78,0	0/0:23,0:23:56.99:0,57,641	1/1:22,0:22:46.09:425,46,0	1/1:19,0:19:3.01:61,3,0	0/0:28,0:28:71.57:0,72,735	0/0:24,0:24:54.03:0,54,607	0/0:21,0:21:54.08:0,54,684	0/0:31,0:31:74.78:0,75,927	0/0:21,0:21:48.06:0,48,586	1/1:13,0:13:23.77:197,24,0	0/0:25,0:25:32.80:0,33,254	1/1:8,15:23:44.94:736,45,0	1/1:12,29:43:71.46:910,71,0	1/1:5,16:22:18.06:449,18,0	0/0:31,0:31:69.05:0,69,789	0/0:35,0:35:80.94:0,81,941	0/0:26,0:26:69.01:0,69,805	0/0:23,0:23:54.10:0,54,716	1/1:3,21:22:60.07:1046,60,0	0/1:7,16:26:1.45:428,0,1	1/1:0,13:14:21.07:524,21,0
chr10	86777428	.	G	GGATGGATAGATA	3641.25	PASS	AB=0.992;AC=12;AF=0.214;AN=56;BaseQRankSum=-5.281;DP=666;FS=1.362;HRun=0;HaplotypeScore=218.1744;InbreedingCoeff=0.2267;MQ=60.33;MQ0=5;MQRankSum=1.345;QD=16.04;ReadPosRankSum=-4.821;VQSLOD=1.6090;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:80.71:0,81,1684	1/1:0,5:5:3.01:183,3,0	0/0:17,0:15:42.03:0,42,440	0/0:15,0:12:13.62:0,14,262	0/0:30,0:30:89.95:0,90,1939	0/0:13,0:25:49.54:0,50,341	0/0:16,0:16:42:0,42,640	0/1:39,0:34:43.41:546,0,43	0/0:19,0:19:57.03:0,57,1239	1/1:4,20:27:69.15:1509,69,0	1/1:2,23:28:2.80:183,3,0	0/0:30,0:30:78.06:0,78,1549	0/0:21,0:21:63.13:0,63,1440	0/0:21,0:21:60.11:0,60,1420	0/0:29,0:28:80.76:0,81,1850	0/0:19,0:19:51.10:0,51,1218	0/1:18,0:19:67.76:465,0,68	0/0:10,0:21:28.10:0,28,288	0/1:19,0:19:23.63:304,0,24	0/1:40,0:40:99:189,0,196	0/0:19,0:19:3:0,3,26	0/0:30,0:30:83.33:0,83,1567	0/0:30,0:30:83.96:0,84,1666	0/0:24,0:25:72.09:0,72,1570	0/0:23,0:23:63.15:0,63,1556	0/1:25,0:23:99:229,0,136	0/1:25,0:25:33.22:33,0,211	0/0:16,0:16:5.98:0,6,46
chr10	86777494	.	CT	C	474.70	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.135;DP=610;FS=0.801;HRun=9;HaplotypeScore=83.1353;InbreedingCoeff=0.9893;MQ=69.58;MQ0=0;MQRankSum=-1.274;QD=18.26;ReadPosRankSum=1.040;VQSLOD=3.8822;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:26:34.42:569,34,0	0/0:8,0:8:21.06:0,21,242	0/0:11,0:11:24.03:0,24,249	0/0:12,0:12:27.08:0,27,306	0/0:30,0:30:78.23:0,78,897	0/0:20,0:20:45.13:0,45,519	0/0:12,0:12:24.07:0,24,277	0/0:46,0:46:99:0,117,1321	0/0:17,0:17:39.10:0,39,439	0/0:30,0:30:78.22:0,78,892	0/0:22,0:22:48.14:0,48,554	0/0:30,0:30:87.21:0,87,974	0/0:21,0:21:63.10:0,63,710	0/0:22,0:22:57.17:0,57,658	0/0:16,0:16:42.12:0,42,485	0/0:20,0:20:54.13:0,54,610	0/0:20,0:21:53.96:0,54,587	0/0:17,0:16:33.10:0,33,381	0/0:19,0:19:51.11:0,51,564	0/0:29,0:29:73.46:0,73,830	0/0:14,0:14:27.07:0,27,302	0/0:21,0:21:60.17:0,60,683	0/0:19,0:19:54.15:0,54,615	0/0:21,0:21:51.11:0,51,573	0/0:23,1:24:38.73:0,39,700	0/0:31,0:31:81.23:0,81,927	0/0:23,0:23:45.13:0,45,519	0/0:28,0:28:69.18:0,69,774
chr10	86778145	.	T	TA	2522.79	PASS	AB=0.958;AC=15;AF=0.268;AN=56;BaseQRankSum=-6.790;DP=676;FS=0.391;HRun=12;HaplotypeScore=87.8275;InbreedingCoeff=0.7325;MQ=74.67;MQ0=1;MQRankSum=-1.292;QD=12.37;ReadPosRankSum=-1.269;VQSLOD=3.2754;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:53:72.81:0,73,211	0/0:10,0:10:2.62:0,3,151	0/0:30,1:27:7.45:0,7,91	0/0:16,0:16:17.84:0,18,102	0/0:22,3:25:26.62:0,27,339	0/0:25,0:26:52.69:0,53,376	0/1:20,1:23:9.55:10,0,245	1/1:12,17:30:0.22:326,0,0	0/0:19,0:21:45.65:0,46,317	0/0:29,0:31:54.55:0,55,513	0/0:20,0:25:41.91:0,42,282	0/0:20,0:20:38.66:0,39,282	0/0:15,0:18:35.91:0,36,236	0/0:17,0:19:26.28:0,26,181	0/0:16,0:16:38.73:0,39,284	0/0:14,0:14:32.79:0,33,239	0/0:23,0:30:46.70:0,47,382	0/0:13,1:16:2.68:0,3,174	1/1:4,11:18:36.60:342,37,0	1/1:5,18:24:10.06:399,10,0	1/1:12,25:37:19.76:512,20,0	0/0:28,0:30:72.62:0,73,515	0/0:22,0:22:32.66:0,33,240	0/0:25,1:26:35.41:0,35,407	0/0:14,1:19:13.66:0,14,245	1/1:8,20:28:48.01:456,48,0	1/1:20,13:34:0.20:467,0,0	1/1:1,8:10:20.87:189,21,0
chr10	86778573	.	ATGTGTGTGTG	A	755.28	PASS	AB=0.810;AC=7;AF=0.135;AN=52;BaseQRankSum=4.710;DP=781;FS=7.849;HRun=0;HaplotypeScore=201.8958;InbreedingCoeff=0.7742;MQ=57.16;MQ0=19;MQRankSum=-3.213;QD=7.63;ReadPosRankSum=-0.198;VQSLOD=1.9212;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:57.20:0,57,1873	1/1:8,2:10:3.01:89,3,0	./.	./.	0/0:13,0:13:9.03:0,9,256	0/0:24,0:23:36.11:0,36,1163	0/0:40,0:41:40.08:0,40,1153	0/0:28,0:25:11.47:0,11,168	0/0:29,0:29:21.96:0,22,667	1/1:27,11:38:20.82:454,21,0	0/1:13,4:17:0.03:0,0,0	0/0:39,0:41:75.72:0,76,2568	0/0:23,0:26:48.16:0,48,1475	0/0:26,0:25:30.10:0,30,802	0/0:33,0:34:48.15:0,48,1493	0/0:38,0:41:44.81:0,45,1698	1/1:25,8:34:7.23:333,7,0	0/0:26,0:33:21.01:0,21,772	0/0:17,0:17:21.96:0,22,573	0/0:20,0:20:24.04:0,24,676	0/0:66,0:71:45.15:0,45,1009	0/0:17,0:17:21.05:0,21,778	0/0:14,0:14:12.04:0,12,426	0/0:46,0:47:78.22:0,78,2830	0/0:17,0:17:24.06:0,24,871	0/0:25,0:27:35.78:0,36,693	0/0:15,0:18:30.57:0,31,650	0/0:7,0:7:4.57:0,5,49
chr10	86780499	.	G	GAC	470.44	PASS	AB=0.682;AC=6;AF=0.115;AN=52;BaseQRankSum=-0.321;DP=626;FS=4.514;HRun=0;HaplotypeScore=76.5629;InbreedingCoeff=0.5033;MQ=52.14;MQ0=62;MQRankSum=1.260;QD=6.82;ReadPosRankSum=-2.170;VQSLOD=2.3906;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:30:36.11:0,36,428	1/1:5,6:10:8.86:110,9,0	./.	./.	0/0:15,0:14:15.03:0,15,168	0/0:13,0:11:7.40:0,7,54	0/0:37,0:31:47.18:0,47,544	0/0:29,0:27:25.87:0,26,489	0/0:24,0:19:29.77:0,30,347	0/1:14,10:18:8.72:332,0,9	1/1:6,3:7:5.61:58,6,0	0/0:27,0:22:48.14:0,48,570	0/0:23,0:21:38.89:0,39,432	0/0:22,0:19:33.09:0,33,384	0/0:23,0:23:23.89:0,24,253	0/0:18,0:17:33.10:0,33,392	0/1:12,13:20:23.98:90,0,24	0/0:17,0:15:20.14:0,20,208	0/0:21,0:20:34.21:0,34,354	0/0:15,0:10:11.97:0,12,125	0/0:68,0:56:22.29:0,22,618	0/0:12,0:8:12.04:0,12,144	0/0:15,0:12:15.52:0,16,180	0/0:36,0:34:58.95:0,59,656	0/0:18,0:15:26.73:0,27,276	0/0:31,0:25:51.06:0,51,607	0/0:21,0:20:26.19:0,26,259	0/0:7,0:7:5.95:0,6,72
chr10	86781128	.	TG	T	5710.55	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.878;DP=645;FS=1.478;HRun=3;HaplotypeScore=64.5407;InbreedingCoeff=0.9999;MQ=78.73;MQ0=0;MQRankSum=-0.465;QD=34.40;ReadPosRankSum=-1.217;VQSLOD=4.8762;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,156,2196	0/0:13,0:13:38.72:0,39,528	0/0:14,0:14:42.14:0,42,597	0/0:19,0:19:57.17:0,57,785	0/0:23,0:23:69.23:0,69,987	0/0:23,0:23:66.21:0,66,931	0/0:20,0:20:60.19:0,60,848	1/1:3,22:25:66.19:804,66,0	0/0:27,0:27:78.24:0,78,1090	0/0:27,0:27:78.19:0,78,1096	0/0:16,0:16:48.12:0,48,636	0/0:31,0:31:87.29:0,87,1251	0/0:16,0:16:48.11:0,48,650	0/0:32,0:32:96.30:0,96,1347	0/0:22,0:22:66.21:0,66,926	0/0:17,0:17:45.15:0,45,648	0/0:31,0:30:87.27:0,87,1231	0/0:14,0:14:42.14:0,42,604	1/1:1,24:25:72.21:878,72,0	1/1:1,23:24:69.15:836,69,0	1/1:0,31:31:93.29:1153,93,0	0/0:19,0:19:54.17:0,54,759	0/0:16,0:16:45.15:0,45,646	0/0:29,0:29:81.26:0,81,1148	0/0:18,0:18:54.17:0,54,759	1/1:1,27:28:38.05:924,38,0	1/1:0,21:21:54.17:669,54,0	1/1:0,12:12:36.11:446,36,0
chr10	86781233	.	GCTA	G	7023.05	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=12.613;DP=690;FS=8.519;HRun=0;HaplotypeScore=127.6018;InbreedingCoeff=0.9976;MQ=81.83;MQ0=0;MQRankSum=-1.827;QD=25.45;ReadPosRankSum=1.985;VQSLOD=4.2752;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,111,569	1/1:13,0:13:25.82:78,26,0	0/0:12,0:12:24.08:0,24,483	0/0:27,0:27:50.17:0,50,825	0/0:26,0:26:60.21:0,60,1241	0/0:20,0:20:57.17:0,57,1124	0/0:30,0:30:84.25:0,84,1681	1/1:11,16:27:48.12:662,48,0	0/0:31,0:31:81.28:0,81,1670	1/1:15,0:15:25.43:85,25,0	1/1:15,0:15:16.27:48,16,0	0/0:22,0:22:57.20:0,57,1194	0/0:19,0:19:54.17:0,54,1076	0/0:20,0:20:57.18:0,57,1134	0/0:23,0:23:63.22:0,63,1323	0/0:32,0:32:81.21:0,81,1620	1/1:37,0:37:57.81:164,58,0	0/0:34,0:34:93.26:0,93,1813	1/1:7,27:34:78.16:1065,78,0	1/1:2,17:19:45.10:651,45,0	1/1:3,43:46:99:1580,105,0	0/0:23,0:23:63.18:0,63,1245	0/0:16,0:16:42.08:0,42,800	0/0:23,0:23:57.16:0,57,1121	0/0:13,0:13:39.12:0,39,780	1/1:4,21:25:63.20:929,63,0	1/1:0,23:23:57.05:858,57,0	1/1:2,20:22:60.20:902,60,0
chr10	86781243	.	CTA	C	3664.76	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=15.729;DP=688;FS=0.978;HRun=0;HaplotypeScore=124.1720;InbreedingCoeff=0.4552;MQ=82.14;MQ0=0;MQRankSum=-4.523;QD=11.86;ReadPosRankSum=6.146;VQSLOD=3.2211;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:45,0:45:2.57:3,0,87	1/1:0,13:13:39.13:630,39,0	0/0:10,0:10:27.09:0,27,527	0/0:29,0:29:59.21:0,59,1264	0/0:24,0:24:69.24:0,69,1356	0/0:23,0:23:69.24:0,69,1318	0/0:32,0:32:96.33:0,96,1897	0/1:21,0:21:33.29:33,0,164	0/0:29,0:29:87.30:0,87,1724	1/1:0,13:13:39.13:628,39,0	1/1:0,12:12:24.08:391,24,0	0/0:24,0:24:72.24:0,72,1373	0/0:20,0:20:60.20:0,60,1161	0/0:22,0:22:66.22:0,66,1259	0/0:23,0:23:69.24:0,69,1378	0/0:34,0:34:99:0,102,1918	1/1:0,36:36:90.31:1467,90,0	0/0:32,0:32:96.33:0,96,1941	0/1:32,0:32:60.31:60,0,163	0/1:17,0:17:5.31:52,0,5	0/1:49,0:49:99:131,0,108	0/0:22,0:22:66.21:0,66,1298	0/0:17,0:17:48.16:0,48,915	0/0:24,0:24:72.17:0,72,1297	0/0:14,0:14:42.14:0,42,829	0/1:23,0:23:41.22:75,0,41	0/1:27,0:27:67.20:67,0,103	1/1:21,0:21:41.41:127,41,0
chr10	86781244	.	T	TG	1828.22	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.638;DP=684;FS=3.199;HRun=0;HaplotypeScore=118.0763;InbreedingCoeff=0.9614;MQ=81.71;MQ0=0;MQRankSum=-2.530;QD=15.36;ReadPosRankSum=2.838;VQSLOD=5.4726;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,44:45:99:1749,123,0	1/1:13,0:13:7.75:24,8,0	0/0:10,0:10:27.09:0,27,378	0/0:28,0:28:71.27:0,71,966	0/0:24,0:24:69.23:0,69,963	0/0:24,0:24:69.22:0,69,948	0/0:32,0:32:96.30:0,96,1324	0/0:20,0:20:53.71:0,54,362	0/0:30,0:30:90.30:0,90,1255	1/1:13,0:13:23.32:131,23,0	1/1:12,0:12:7.27:23,7,0	0/0:24,0:24:72.24:0,72,1006	0/0:20,0:20:60.18:0,60,820	0/0:22,0:22:66.22:0,66,918	0/0:23,0:23:69.23:0,69,965	0/0:33,0:33:99:0,99,1366	1/1:36,0:36:27.15:65,27,0	0/0:32,0:32:96.32:0,96,1343	0/0:31,0:31:78.69:0,79,492	0/0:17,0:17:44.40:0,44,219	0/0:49,0:49:99:0,111,603	0/0:22,0:22:63.21:0,63,880	0/0:18,0:18:48.15:0,48,654	0/0:21,0:21:63.21:0,63,877	0/0:14,0:14:42.14:0,42,587	0/0:23,0:23:63.92:0,64,350	0/0:27,0:27:64.15:0,64,389	0/0:20,0:21:54.89:0,55,237
chr10	86782457	.	C	CG	3845.98	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=7.233;DP=516;FS=1.344;HRun=6;HaplotypeScore=69.7954;InbreedingCoeff=0.9139;MQ=67.10;MQ0=0;MQRankSum=-0.175;QD=23.45;ReadPosRankSum=-1.662;VQSLOD=2.4458;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:75.06:0,75,744	0/0:6,0:6:18.04:0,18,183	0/0:1,0:1:3.01:0,3,31	0/0:8,0:8:11.99:0,12,112	0/0:9,0:9:15.02:0,15,145	0/0:15,0:15:33.06:0,33,333	0/0:39,0:39:99:0,108,1102	1/1:6,7:13:18.06:226,18,0	0/0:17,0:17:48.10:0,48,484	0/0:16,0:16:23.89:0,24,225	0/0:3,0:3:3:0,3,30	0/0:27,0:27:51.07:0,51,512	0/0:13,0:13:36.08:0,36,367	0/0:25,0:25:69.15:0,69,700	0/0:13,0:13:27.05:0,27,275	0/0:14,0:14:39.09:0,39,398	0/0:42,0:42:99:0,108,1079	1/1:2,18:20:54.17:679,54,0	1/1:5,13:18:39.02:417,39,0	1/1:0,8:8:11.91:97,12,0	1/1:5,43:49:99:1244,100,0	0/0:9,0:9:18.02:0,18,183	0/0:10,0:10:21.04:0,21,213	0/0:37,0:37:99:0,102,1021	0/0:13,0:13:18.02:0,18,183	1/1:3,27:30:32.55:692,33,0	1/1:0,13:12:30.09:377,30,0	1/1:4,9:13:9.03:113,9,0
chr10	86783411	.	TCACACACA	T	924.67	PASS	AB=0.858;AC=8;AF=0.154;AN=52;BaseQRankSum=4.310;DP=536;FS=8.874;HRun=0;HaplotypeScore=131.5210;InbreedingCoeff=0.3623;MQ=63.40;MQ0=7;MQRankSum=-3.886;QD=8.18;ReadPosRankSum=0.758;VQSLOD=2.1110;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:15.05:0,15,517	0/0:4,0:4:3.01:0,3,48	./.	./.	0/0:10,0:10:12.04:0,12,301	0/0:18,0:18:18.06:0,18,705	0/0:22,0:22:21.07:0,21,636	0/0:25,0:25:2.69:0,3,7	0/0:25,0:25:39.13:0,39,1456	0/0:16,0:15:30.10:0,30,841	0/0:7,0:7:6.02:0,6,223	0/0:9,0:9:12.04:0,12,409	0/0:17,0:17:30.56:0,31,753	0/0:12,0:12:21.07:0,21,791	0/0:24,0:23:40.02:0,40,1331	0/0:21,0:22:30.09:0,30,1098	0/0:20,0:27:16.23:0,16,254	0/0:10,0:17:12.04:0,12,400	0/1:14,6:19:12.15:150,0,12	1/1:11,0:10:2.97:21,3,0	0/1:29,1:30:11.86:22,0,12	0/0:19,0:18:15.05:0,15,431	0/0:17,0:18:27.09:0,27,861	0/0:31,0:32:57.17:0,57,1707	0/0:17,0:16:9.03:0,9,284	1/1:17,3:20:6.01:148,6,0	0/1:13,9:22:6.95:705,0,7	0/1:9,0:9:0:0,0,0
chr10	86786241	.	T	TAAG	17294.14	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-14.639;DP=679;FS=2.056;HRun=0;HaplotypeScore=86.3316;InbreedingCoeff=0.9956;MQ=78.42;MQ0=0;MQRankSum=-6.424;QD=52.73;ReadPosRankSum=-0.009;VQSLOD=6.5776;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,38:41:87.30:1971,87,0	1/1:0,5:5:11.97:219,12,0	0/0:20,0:19:54.18:0,54,881	0/0:21,0:21:54.09:0,54,843	0/0:16,0:16:48.16:0,48,798	0/0:19,0:19:57.16:0,57,892	0/0:32,0:32:87.27:0,87,1399	1/1:5,23:28:81.22:1728,81,0	0/0:28,0:28:84.27:0,84,1364	1/1:0,31:31:93.32:2074,93,0	1/1:0,19:20:54.03:1061,54,0	0/0:28,0:28:81.28:0,81,1345	0/0:23,0:23:66.21:0,66,1069	0/0:27,0:27:72.20:0,72,1123	0/0:16,0:16:48.15:0,48,773	0/0:33,0:33:96.31:0,96,1556	1/1:1,32:37:72.16:1580,72,0	1/1:1,22:22:51.12:1107,51,0	1/1:8,17:26:66.64:1348,67,0	1/1:1,19:20:53.91:991,54,0	1/1:5,30:35:77.89:1701,78,0	0/0:20,0:20:60.20:0,60,978	0/0:19,0:19:48.16:0,48,790	0/0:34,0:34:96.25:0,96,1485	0/0:15,0:15:45.14:0,45,720	1/1:5,22:27:75.21:1592,75,0	1/1:1,22:23:57.15:1242,57,0	1/1:0,12:12:29.98:679,30,0
chr10	86786935	.	AT	A	1402.49	PASS	AB=0.939;AC=13;AF=0.232;AN=56;BaseQRankSum=3.326;DP=506;FS=3.391;HRun=13;HaplotypeScore=85.7184;InbreedingCoeff=0.4466;MQ=76.01;MQ0=0;MQRankSum=1.434;QD=7.19;ReadPosRankSum=3.124;VQSLOD=2.9556;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:26:28.73:0,29,154	1/1:1,6:7:11.78:87,12,0	0/1:36,0:20:62.30:62,0,76	0/0:17,0:12:0.78:0,1,76	0/0:18,2:20:20.16:0,20,358	0/0:14,2:16:17.05:0,17,300	0/1:12,1:13:0.88:1,0,154	0/0:6,0:22:35.72:0,36,257	0/0:11,0:11:21.03:0,21,204	1/1:11,12:23:35.62:255,36,0	1/1:1,13:15:37.82:268,38,0	0/0:20,0:20:30.48:0,30,363	0/0:13,0:13:30.05:0,30,291	0/0:14,0:14:33.05:0,33,321	0/0:12,0:12:21.03:0,21,200	0/0:12,2:14:2.13:0,2,183	1/1:8,43:52:99:859,118,0	0/0:7,0:14:20.68:0,21,130	0/0:10,0:14:26.16:0,26,173	0/0:3,0:12:26.03:0,26,155	0/0:6,0:12:20.31:0,20,133	0/1:17,2:19:13.79:14,0,199	0/0:9,2:11:0.01:0,0,155	0/0:19,0:19:41.99:0,42,428	0/1:14,2:16:16.76:17,0,171	0/0:11,0:23:23.10:0,23,267	0/1:7,0:12:4.20:4,0,46	0/0:6,0:18:31.71:0,32,190
chr10	86786948	.	TC	T	1250.76	PASS	AB=0.984;AC=22;AF=0.393;AN=56;BaseQRankSum=10.096;DP=503;FS=1.974;HRun=1;HaplotypeScore=90.2810;InbreedingCoeff=0.6826;MQ=78.41;MQ0=0;MQRankSum=-2.776;QD=4.74;ReadPosRankSum=-0.322;VQSLOD=0.2860;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:27:36.35:236,36,0	0/0:7,0:7:7.46:0,7,25	0/1:36,0:21:6.01:6,0,122	0/0:25,0:16:12.11:0,12,129	0/0:21,0:21:49.13:0,49,583	0/0:15,0:15:36.24:0,36,448	0/0:13,0:13:37.06:0,37,353	1/1:18,1:19:31.12:175,31,0	0/0:9,0:9:27.03:0,27,312	0/1:14,1:15:22.06:41,0,22	0/1:16,0:16:14.87:15,0,41	0/0:22,0:22:56.27:0,56,574	0/0:15,0:15:41.32:0,41,409	0/0:17,0:17:45.03:0,45,498	0/0:14,0:14:35.91:0,36,360	0/0:14,0:14:29.55:0,30,337	0/1:53,0:53:6.92:7,0,134	1/1:11,0:11:15.78:84,16,0	1/1:10,0:10:6.84:99,7,0	1/1:14,0:14:16.24:148,16,0	1/1:10,0:10:7.95:71,8,0	0/0:19,0:20:49.61:0,50,474	0/0:12,0:12:18.42:0,18,272	0/0:21,0:21:56.84:0,57,619	0/0:14,0:14:34.46:0,34,346	1/1:17,2:19:36.76:261,37,0	1/1:14,1:14:17.10:176,17,0	1/1:17,0:18:27.96:139,28,0
chr10	86787732	.	AT	A	2621.97	PASS	AB=0.727;AC=18;AF=0.321;AN=56;BaseQRankSum=7.144;DP=507;FS=25.950;HRun=14;HaplotypeScore=56.5726;InbreedingCoeff=0.7234;MQ=64.08;MQ0=4;MQRankSum=-0.893;QD=11.60;ReadPosRankSum=0.683;VQSLOD=1.2396;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,37:41:86.24:596,86,0	0/0:7,0:7:18.01:0,18,163	0/0:20,0:14:14.82:0,15,113	0/0:11,0:5:11.63:0,12,81	0/0:21,1:22:27.47:0,27,398	0/0:13,3:17:6.30:0,6,309	0/1:11,2:14:11.97:12,0,216	1/1:7,27:37:51.59:463,52,0	0/0:12,0:13:29.86:0,30,261	0/0:16,0:15:6.67:0,7,192	0/0:12,0:12:27.02:0,27,247	0/0:18,2:20:1.35:0,1,294	0/0:9,1:10:6.46:0,6,202	0/0:18,0:18:39.01:0,39,350	0/0:18,0:18:45.04:0,45,414	0/0:10,0:10:18.01:0,18,163	0/0:24,0:23:38.98:0,39,353	1/1:4,23:27:62.46:432,62,0	0/1:7,8:17:21.92:139,0,22	1/1:6,12:21:21.59:224,22,0	1/1:6,8:14:20.81:144,21,0	0/0:13,1:14:23.86:0,24,210	0/0:13,0:13:24.03:0,24,223	0/0:18,0:17:36.04:0,36,334	0/0:15,2:17:0.87:0,1,289	1/1:2,14:17:40.67:273,41,0	1/1:4,22:27:50.51:349,51,0	1/1:0,9:10:28.82:191,29,0
chr10	86788768	.	A	AG	7842.93	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-15.621;DP=549;FS=4.009;HRun=1;HaplotypeScore=50.6610;InbreedingCoeff=0.9971;MQ=82.28;MQ0=0;MQRankSum=-1.361;QD=41.72;ReadPosRankSum=-0.025;VQSLOD=5.1043;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.28:0,96,1215	0/0:7,0:7:21.07:0,21,273	0/0:17,0:17:42.11:0,42,528	0/0:12,0:12:36.08:0,36,449	0/0:21,0:21:60.18:0,60,765	0/0:15,0:15:42.14:0,42,545	0/0:26,0:26:75.24:0,75,974	1/1:0,39:39:99:1644,114,0	0/0:17,0:17:51.15:0,51,648	0/0:22,0:22:66.21:0,66,846	0/0:11,0:11:30.10:0,30,390	0/0:22,0:22:60.19:0,60,777	0/0:18,0:18:54.18:0,54,701	0/0:17,0:17:51.15:0,51,647	0/0:20,0:20:57.19:0,57,740	0/0:19,0:19:54.18:0,54,701	0/0:27,0:27:78.25:0,78,1013	1/1:2,31:34:87.29:1298,87,0	1/1:1,17:18:54.18:809,54,0	1/1:0,15:15:45.15:674,45,0	1/1:0,37:37:99:1529,102,0	0/0:20,0:20:60.20:0,60,778	0/0:7,0:7:21.07:0,21,273	0/0:18,0:18:54.18:0,54,701	0/0:12,0:12:36.12:0,36,467	1/1:1,25:26:75.25:1124,75,0	1/1:0,12:12:33.11:495,33,0	1/1:1,6:7:18.06:270,18,0
chr10	86790467	.	A	AT	1582.88	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.175;DP=417;FS=1.129;HRun=0;HaplotypeScore=74.6990;InbreedingCoeff=0.9722;MQ=94.34;MQ0=0;MQRankSum=-12.160;QD=21.11;ReadPosRankSum=0.621;VQSLOD=5.0236;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:11:29.47:238,29,0	0/0:13,0:13:39.11:0,39,527	0/0:20,0:20:51.16:0,51,688	0/0:22,0:22:66.17:0,66,865	0/0:16,0:16:48.16:0,48,671	0/0:16,0:16:45.15:0,45,629	0/0:21,0:21:60.20:0,60,839	1/1:4,5:9:14.86:146,15,0	0/0:19,0:18:51.17:0,51,713	0/0:23,0:23:66.22:0,66,923	0/0:12,0:12:36.12:0,36,501	0/0:20,0:20:57.19:0,57,797	0/0:14,0:14:42.14:0,42,587	0/0:14,0:14:39.13:0,39,539	0/0:22,0:22:66.22:0,66,923	0/0:13,0:13:36.11:0,36,486	0/0:25,0:25:75.23:0,75,1029	1/1:0,5:5:15.02:142,15,0	1/1:1,3:4:9.02:88,9,0	1/1:0,10:10:29.96:251,30,0	1/1:1,9:10:26.95:239,27,0	0/0:16,0:16:45.13:0,45,611	0/0:6,0:6:18.06:0,18,252	0/0:38,0:38:99:0,108,1488	0/0:12,0:12:36.10:0,36,483	1/1:0,17:17:51.04:471,51,0	1/1:0,5:5:15:134,15,0	1/1:0,3:3:9.01:84,9,0
chr10	86790468	.	CTGG	C	2107.45	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.716;DP=415;FS=0.534;HRun=0;HaplotypeScore=89.2493;InbreedingCoeff=0.9736;MQ=94.47;MQ0=0;MQRankSum=-12.448;QD=28.10;ReadPosRankSum=0.739;VQSLOD=3.7073;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:11:30.04:324,30,0	0/0:13,0:13:39.13:0,39,961	0/0:19,0:19:55.07:0,55,1271	0/0:23,0:23:67.47:0,67,1581	0/0:16,0:16:48.16:0,48,1183	0/0:16,0:16:45.15:0,45,1081	0/0:22,0:22:66.23:0,66,1624	1/1:5,5:10:17.89:169,18,0	0/0:19,0:18:51.18:0,51,1230	0/0:23,0:23:69.24:0,69,1676	0/0:12,0:12:36.11:0,36,835	0/0:20,0:20:57.20:0,57,1405	0/0:14,0:14:42.14:0,42,1000	0/0:13,0:13:39.13:0,39,959	0/0:23,0:23:69.19:0,69,1646	0/0:12,0:12:36.09:0,36,808	0/0:25,0:25:75.26:0,75,1818	1/1:0,5:5:15.05:196,15,0	1/1:0,3:3:9.03:113,9,0	1/1:0,10:10:30.08:335,30,0	1/1:1,9:10:27.03:282,27,0	0/0:16,0:16:45.15:0,45,1109	0/0:6,0:6:18.06:0,18,443	0/0:37,0:37:99:0,105,2541	0/0:11,0:11:33.10:0,33,764	1/1:0,17:17:51.15:610,51,0	1/1:0,5:5:15.04:176,15,0	1/1:0,3:3:9.03:113,9,0
chr10	86790470	.	GGCACT	G	1864.25	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.032;DP=416;FS=6.046;HRun=0;HaplotypeScore=107.3798;InbreedingCoeff=0.9726;MQ=96.73;MQ0=0;MQRankSum=-12.304;QD=25.19;ReadPosRankSum=0.109;VQSLOD=3.0180;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:10:27.52:268,28,0	0/0:13,0:13:39.13:0,39,1259	0/0:19,0:19:48.06:0,48,1608	0/0:26,0:26:74.71:0,75,1990	0/0:16,0:16:48.16:0,48,1528	0/0:15,0:15:42.14:0,42,1323	0/0:22,0:22:66.23:0,66,2003	1/1:5,6:11:29.56:264,30,0	0/0:18,0:17:48.16:0,48,1527	0/0:23,0:23:66.23:0,66,2106	0/0:11,0:11:33.11:0,33,1057	0/0:21,0:21:60.21:0,60,1841	0/0:13,0:13:39.13:0,39,1259	0/0:13,0:13:39.13:0,39,1247	0/0:24,0:24:72.25:0,72,2187	0/0:13,0:13:36.12:0,36,1020	0/0:26,0:26:78.25:0,78,2320	1/1:5,0:5:12.50:131,12,0	1/1:3,0:3:9.03:103,9,0	1/1:10,0:10:30.04:287,30,0	1/1:9,0:9:24.02:223,24,0	0/0:16,0:16:45.15:0,45,1454	0/0:6,0:6:18.06:0,18,571	0/0:37,0:37:99:0,99,3177	0/0:10,0:10:30.10:0,30,969	1/1:17,0:17:51.07:537,51,0	1/1:5,0:5:15.03:159,15,0	1/1:3,0:3:9.02:102,9,0
chr10	86790614	.	T	TGGTTC	1232.04	PASS	AB=0.780;AC=12;AF=0.240;AN=50;BaseQRankSum=3.451;DP=334;FS=0.000;HRun=0;HaplotypeScore=52.2304;InbreedingCoeff=0.1555;MQ=60.30;MQ0=70;MQRankSum=-3.067;QD=11.00;ReadPosRankSum=3.898;VQSLOD=1.2973;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,1:8:8.49:144,0,8	./.	0/0:32,0:8:23.70:0,24,292	0/0:28,0:15:14.36:0,14,154	0/0:17,0:15:32.92:0,33,528	0/0:22,0:17:45.12:0,45,831	0/0:8,0:4:12.02:0,12,196	0/1:12,0:11:76.73:77,0,220	0/0:10,0:6:15.05:0,15,279	./.	./.	0/0:6,0:5:12.04:0,12,218	0/0:7,0:4:2.96:0,3,19	0/0:10,0:8:21.07:0,21,386	0/0:10,0:8:24.08:0,24,441	0/0:10,0:10:27.09:0,27,525	0/0:12,0:4:3.01:0,3,33	1/1:6,2:4:3.01:83,3,0	1/1:2,0:7:9.01:199,9,0	0/1:7,5:12:99:225,0,246	1/1:2,0:1:3.01:52,3,0	0/0:4,0:3:6.02:0,6,102	0/0:5,0:3:6.02:0,6,97	0/0:7,0:6:9.46:0,9,138	0/0:31,0:26:58.96:0,59,1143	0/1:14,2:12:99:137,0,249	0/1:8,12:18:66.71:443,0,67	0/1:12,0:3:17.95:18,0,77
chr10	86790779	.	TTA	T	770.94	PASS	AB=0.547;AC=10;AF=0.227;AN=44;BaseQRankSum=8.009;DP=319;FS=9.732;HRun=0;HaplotypeScore=71.3422;InbreedingCoeff=0.6002;MQ=43.15;MQ0=51;MQRankSum=-6.189;QD=19.27;ReadPosRankSum=4.189;VQSLOD=3.1088;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:12,0:8:24.08:0,24,469	0/0:14,0:11:30.09:0,30,537	0/0:9,0:9:27.04:0,27,448	0/0:20,0:18:51.17:0,51,1019	0/0:23,0:21:60.21:0,60,1200	1/1:3,1:1:3.01:49,3,0	0/0:19,0:18:54.19:0,54,1096	./.	./.	0/0:20,0:18:48.16:0,48,941	0/0:11,0:10:30.10:0,30,609	0/0:18,0:18:54.18:0,54,1049	0/0:17,0:16:48.16:0,48,951	0/0:19,0:16:48.13:0,48,890	./.	./.	1/1:1,5:5:15.05:204,15,0	1/1:0,4:4:3.01:38,3,0	0/0:7,3:3:0.89:0,1,2	0/0:5,0:5:12.04:0,12,239	0/0:11,0:11:27.09:0,27,530	0/0:22,0:18:48.12:0,48,908	0/0:16,0:16:45.11:0,45,857	0/1:2,6:7:39.83:196,0,40	0/1:1,11:12:39.79:222,0,40	1/1:1,5:5:15.05:202,15,0
chr10	86790800	.	C	CA	2015.55	PASS	AB=0.563;AC=17;AF=0.354;AN=48;BaseQRankSum=11.492;DP=342;FS=18.191;HRun=1;HaplotypeScore=72.3877;InbreedingCoeff=0.8368;MQ=62.52;MQ0=24;MQRankSum=-9.768;QD=25.19;ReadPosRankSum=1.499;VQSLOD=2.3649;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:15:42.09:489,42,0	./.	0/0:19,0:15:42.11:0,42,517	0/0:24,0:21:63.13:0,63,741	0/0:13,0:13:36.12:0,36,467	0/0:21,0:20:51.16:0,51,657	0/0:21,0:20:57.18:0,57,734	1/1:3,4:5:12.03:150,12,0	0/0:21,0:20:60.20:0,60,778	./.	./.	0/0:19,0:18:45.15:0,45,584	0/0:12,0:12:36.05:0,36,446	0/0:19,0:19:54.18:0,54,700	0/0:19,0:18:42.12:0,42,531	0/0:20,0:18:51.16:0,51,658	./.	1/1:5,4:3:3.01:42,3,0	1/1:0,5:5:15.05:206,15,0	1/1:0,4:4:12.04:161,12,0	1/1:2,4:5:6.01:59,6,0	0/0:8,0:8:21.07:0,21,273	0/0:6,0:6:18.06:0,18,234	0/0:24,0:21:57.18:0,57,734	0/0:14,0:14:39.13:0,39,503	0/1:2,7:9:11.79:287,0,12	1/1:1,16:17:9.30:534,9,0	1/1:1,6:7:21.07:271,21,0
chr10	86791887	.	CCATGCCCA	C	1138.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.234;DP=675;FS=19.536;HRun=0;HaplotypeScore=168.3823;InbreedingCoeff=0.9938;MQ=87.91;MQ0=1;MQRankSum=-6.822;QD=37.96;ReadPosRankSum=-0.562;VQSLOD=1.9902;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,24:28:48.16:1234,48,0	0/0:8,0:8:24.06:0,24,929	0/0:29,0:29:84.29:0,84,3248	0/0:25,0:25:66.23:0,66,2436	0/0:22,0:22:63.22:0,63,2803	0/0:19,0:19:54.16:0,54,2199	0/0:30,0:30:90.31:0,90,3593	0/0:24,0:24:69.24:0,69,2803	0/0:30,0:30:81.24:0,81,3390	0/0:23,0:23:69.24:0,69,2948	0/0:14,0:14:39.13:0,39,1731	0/0:33,0:33:99:0,99,4173	0/0:13,0:13:39.12:0,39,1538	0/0:20,0:20:57.20:0,57,2395	0/0:20,0:20:60.21:0,60,2565	0/0:22,0:22:66.23:0,66,2903	0/0:32,0:31:93.32:0,93,3877	0/0:32,0:32:96.33:0,96,4212	0/0:22,0:22:60.01:0,60,2554	0/0:23,0:23:63.22:0,63,2740	0/0:60,0:59:99:0,175,7264	0/0:15,0:15:45.15:0,45,1999	0/0:16,0:16:42.14:0,42,1859	0/0:43,0:43:99:0,117,4466	0/0:15,0:15:42.13:0,42,1723	0/0:25,0:24:75.24:0,75,3139	0/0:23,0:22:69.24:0,69,3081	0/0:7,0:7:21.07:0,21,892
chr10	86792467	.	T	TC	439.76	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=1.651;DP=412;FS=2.519;HRun=1;HaplotypeScore=66.2381;InbreedingCoeff=0.6550;MQ=38.55;MQ0=44;MQRankSum=-2.494;QD=15.16;ReadPosRankSum=0.348;VQSLOD=3.3715;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,20:24:39.09:534,39,0	0/0:4,0:3:9.03:0,9,116	./.	0/0:1,0:1:3.01:0,3,39	0/0:13,0:12:24.08:0,24,306	0/0:23,0:20:54.11:0,54,663	0/0:20,0:17:38.95:0,39,423	0/0:18,0:16:39.02:0,39,447	0/0:13,0:11:24.01:0,24,295	0/0:13,0:11:27.08:0,27,339	0/0:6,0:4:6.02:0,6,77	0/0:27,0:25:54.15:0,54,669	0/0:11,0:11:33.09:0,33,402	0/0:17,0:17:42.04:0,42,491	0/0:20,0:20:32.89:0,33,320	0/0:18,0:18:35.62:0,36,425	0/0:30,0:26:60.14:0,60,719	0/0:19,0:11:24.03:0,24,278	0/0:23,0:23:63.20:0,63,808	0/0:7,0:6:15.02:0,15,164	0/0:11,0:9:15.05:0,15,193	0/0:5,0:5:11.60:0,12,103	0/0:5,0:4:12.04:0,12,154	0/0:13,0:9:20.89:0,21,227	0/0:10,0:9:24.06:0,24,295	0/0:19,0:16:48.10:0,48,564	0/0:31,0:30:78.05:0,78,857	0/0:6,0:3:9.03:0,9,116
chr10	86792790	.	G	GA	3711.78	PASS	AB=0.747;AC=22;AF=0.423;AN=52;BaseQRankSum=-9.817;DP=352;FS=0.000;HRun=10;HaplotypeScore=39.2696;InbreedingCoeff=0.7797;MQ=66.89;MQ0=2;MQRankSum=-1.732;QD=20.62;ReadPosRankSum=-0.311;VQSLOD=3.7948;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,18:24:46.18:575,46,0	./.	0/0:6,0:6:17.96:0,18,146	0/0:12,0:12:29.96:0,30,246	0/1:5,1:6:17.01:17,0,83	0/0:11,0:10:29.97:0,30,246	0/0:30,0:30:40.07:0,40,531	1/1:6,13:20:17.46:391,17,0	0/0:8,0:8:20.96:0,21,172	0/1:3,4:7:9.50:113,0,10	1/1:1,2:3:6.02:64,6,0	0/0:11,0:11:26.95:0,27,218	0/0:16,0:16:35.92:0,36,292	0/0:9,0:9:23.96:0,24,194	0/0:11,0:11:23.95:0,24,197	0/0:16,0:16:38.90:0,39,313	1/1:6,24:30:66.17:704,66,0	1/1:4,11:16:32.95:335,33,0	1/1:2,12:14:33.03:331,33,0	./.	1/1:5,18:24:50.93:515,51,0	0/0:3,0:2:5.99:0,6,49	0/0:6,0:6:11.96:0,12,98	0/0:29,0:30:82.91:0,83,667	0/0:3,0:2:5.99:0,6,49	1/1:6,11:17:33.08:351,33,0	1/1:5,10:15:24.06:252,24,0	1/1:1,2:3:6.02:64,6,0
chr10	86792896	.	CT	C	660.91	PASS	AB=0.825;AC=10;AF=0.179;AN=56;BaseQRankSum=1.515;DP=380;FS=9.186;HRun=11;HaplotypeScore=55.8064;InbreedingCoeff=0.4597;MQ=66.49;MQ0=2;MQRankSum=2.068;QD=6.68;ReadPosRankSum=3.954;VQSLOD=0.9472;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:23:22.96:0,23,122	1/1:0,4:5:11.02:80,11,0	0/0:8,0:6:12.03:0,12,125	0/0:12,0:11:17.02:0,17,140	0/0:22,1:23:49.65:0,50,459	0/0:13,1:14:8.42:0,8,281	0/1:19,4:23:44.64:45,0,359	0/0:8,0:17:35.09:0,35,222	0/1:7,1:8:3.61:4,0,157	0/1:8,9:16:5.18:157,0,5	1/1:3,2:5:2.98:25,3,0	0/0:13,0:13:30.02:0,30,285	0/1:8,1:9:9.62:10,0,106	0/0:11,0:11:21.04:0,21,217	0/0:17,0:17:42.08:0,42,428	0/0:10,0:10:21.04:0,21,211	1/1:6,25:31:59.87:488,60,0	0/0:2,0:12:14.38:0,14,79	0/0:5,0:12:22.79:0,23,157	0/0:5,0:5:12.17:0,12,70	0/0:10,0:16:8.64:0,9,46	0/0:10,0:10:21.48:0,21,193	0/0:16,0:15:29.99:0,30,276	0/0:22,1:23:29.48:0,29,512	0/0:10,0:10:18.01:0,18,168	0/0:6,0:14:23.08:0,23,168	0/0:5,0:7:5.95:0,6,41	0/0:4,0:6:14.56:0,15,89
chr10	86794287	.	ACT	A	3819.56	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.354;DP=689;FS=3.036;HRun=0;HaplotypeScore=121.2311;InbreedingCoeff=0.9444;MQ=78.02;MQ0=0;MQRankSum=-2.953;QD=38.20;ReadPosRankSum=1.639;VQSLOD=5.6929;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,153,2810	1/1:0,9:9:27.09:398,27,0	0/0:16,1:17:32.43:0,32,781	0/0:20,0:20:45.15:0,45,815	0/0:26,0:26:75.24:0,75,1372	0/0:20,0:20:60.21:0,60,1116	0/0:34,0:34:99:0,99,1845	0/0:22,0:22:63.21:0,63,1148	0/0:26,0:26:78.25:0,78,1429	1/1:0,31:31:87.27:1258,87,0	1/1:0,22:22:54.18:795,54,0	0/0:26,0:26:75.26:0,75,1397	0/0:24,0:24:72.25:0,72,1348	0/0:27,0:27:81.28:0,81,1517	0/0:26,0:26:78.27:0,78,1461	0/0:29,0:29:87.28:0,87,1598	1/1:2,36:38:93.31:1369,93,0	0/0:20,0:20:60.21:0,60,1115	0/0:23,0:23:60.21:0,60,1119	0/0:19,0:19:57.15:0,57,1001	0/0:32,0:32:96.33:0,96,1798	0/0:16,0:16:48.16:0,48,899	0/0:11,0:11:27.08:0,27,473	0/0:22,0:22:66.23:0,66,1227	0/0:21,0:21:63.22:0,63,1180	0/0:28,2:30:1.92:0,2,1485	0/0:33,0:33:93.32:0,93,1739	0/0:12,0:12:29.76:0,30,562
chr10	86794748	.	A	AT	10359.82	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-2.596;DP=571;FS=9.557;HRun=3;HaplotypeScore=66.1830;InbreedingCoeff=0.9995;MQ=93.94;MQ0=0;MQRankSum=-6.693;QD=37.40;ReadPosRankSum=-0.050;VQSLOD=4.8072;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:35:96.32:1344,96,0	1/1:1,10:11:27.09:377,27,0	0/0:24,0:24:63.10:0,63,746	0/0:28,0:28:74.43:0,74,852	0/0:19,0:19:48.13:0,48,564	0/0:17,0:17:48.15:0,48,576	0/0:19,0:19:54.15:0,54,636	1/1:5,24:29:72.20:958,72,0	0/0:16,0:16:45.14:0,45,540	1/1:0,21:21:63.20:862,63,0	1/1:1,13:14:33.11:462,33,0	0/0:24,0:24:63.19:0,63,755	0/0:16,0:16:45.11:0,45,516	0/0:21,0:21:63.17:0,63,733	0/0:12,0:12:33.07:0,33,372	0/0:32,0:32:96.27:0,96,1129	1/1:1,26:27:72.24:1008,72,0	1/1:2,18:20:54.18:750,54,0	1/1:0,20:20:60.17:819,60,0	1/1:1,14:15:39.13:546,39,0	1/1:1,17:18:45.15:630,45,0	0/0:10,0:10:24.07:0,24,288	0/0:15,0:15:42.12:0,42,493	0/0:21,0:21:54.16:0,54,648	0/0:20,0:20:48.15:0,48,575	1/1:1,31:32:93.31:1303,93,0	1/1:1,22:23:60.20:840,60,0	1/1:0,12:12:33.11:461,33,0
chr10	86795299	.	AG	A	2042.47	PASS	AB=1.000;AC=22;AF=0.407;AN=54;BaseQRankSum=7.883;DP=302;FS=9.649;HRun=2;HaplotypeScore=45.6213;InbreedingCoeff=0.6218;MQ=53.99;MQ0=5;MQRankSum=-1.918;QD=10.75;ReadPosRankSum=0.811;VQSLOD=0.7159;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:27:29.98:343,30,0	0/0:2,0:1:0.89:0,1,2	0/1:8,0:6:9.38:16,0,9	0/0:5,0:2:5.81:0,6,34	0/0:9,0:9:16.10:0,16,185	0/0:17,0:17:41.33:0,41,437	0/0:13,0:13:35.85:0,36,372	1/1:24,0:23:56.15:381,56,0	0/0:12,0:12:23.54:0,24,301	0/1:7,0:6:8.64:9,0,14	0/1:2,0:2:7.96:12,0,8	0/0:5,0:5:5.82:0,6,50	0/0:6,0:6:12.02:0,12,136	0/0:3,0:3:9.03:0,9,122	0/0:7,0:7:13.12:0,13,199	0/0:10,0:10:20.86:0,21,194	0/1:20,0:17:34.50:51,0,34	1/1:18,0:19:38.71:281,39,0	1/1:17,0:16:41.73:304,42,0	1/1:2,0:2:5.98:45,6,0	1/1:20,0:20:38.69:279,39,0	0/0:3,0:3:9:0,9,89	./.	0/0:13,0:13:33.11:0,33,449	0/0:7,0:7:20.99:0,21,246	1/1:22,0:22:15.39:307,15,0	1/1:11,0:11:20.80:145,21,0	1/1:10,0:9:8.94:65,9,0
chr10	86795300	.	GGA	G	3950.49	PASS	AB=0.512;AC=17;AF=0.315;AN=54;BaseQRankSum=3.591;DP=300;FS=0.523;HRun=0;HaplotypeScore=43.9809;InbreedingCoeff=0.7748;MQ=56.15;MQ0=5;MQRankSum=-0.518;QD=26.51;ReadPosRankSum=0.347;VQSLOD=4.0702;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:27:13.02:37,13,0	0/0:2,0:1:3.01:0,3,35	0/0:9,0:7:2.72:0,3,56	0/0:5,0:2:6.02:0,6,83	0/0:9,0:9:16.35:0,16,314	0/0:17,0:17:41.58:0,42,745	0/0:14,0:14:36.43:0,36,616	1/1:1,21:21:60.07:845,60,0	0/0:12,0:12:35.08:0,35,506	0/0:6,0:6:14.24:0,14,126	0/0:2,0:2:5.88:0,6,49	0/0:5,0:5:8.88:0,9,96	0/0:6,0:6:12.04:0,12,226	0/0:3,0:3:9.03:0,9,180	0/0:7,0:7:21.06:0,21,359	0/0:10,0:10:20.91:0,21,296	0/0:19,0:17:36.14:0,36,309	1/1:1,18:19:39.09:593,39,0	1/1:0,16:16:45.12:689,45,0	1/1:0,2:2:6.02:97,6,0	1/1:0,20:20:39:565,39,0	0/0:3,0:3:9:0,9,108	./.	0/0:13,0:13:33.11:0,33,665	0/0:7,0:7:21.06:0,21,376	0/1:1,20:21:5.97:653,0,6	1/1:0,11:11:21.07:327,21,0	1/1:1,9:9:9.03:143,9,0
chr10	86795545	.	TTC	T	2634.74	PASS	AC=24;AF=0.462;AN=52;BaseQRankSum=2.249;DP=175;FS=6.824;HRun=0;HaplotypeScore=29.4047;InbreedingCoeff=0.8049;MQ=69.49;MQ0=7;MQRankSum=-4.716;QD=34.22;ReadPosRankSum=0.642;VQSLOD=5.1684;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:21.07:320,21,0	1/1:0,1:1:3.01:46,3,0	0/0:14,0:5:12.30:0,12,163	0/0:26,0:10:22.52:0,23,262	0/0:10,0:10:24.08:0,24,410	0/0:12,0:12:36.12:0,36,669	0/0:4,0:4:12.04:0,12,223	1/1:1,16:17:48.04:650,48,0	./.	1/1:0,4:4:8.28:136,8,0	./.	0/0:4,0:4:12.04:0,12,224	0/0:2,0:2:6.02:0,6,111	0/0:5,0:5:15.05:0,15,246	0/0:3,0:3:6.02:0,6,112	0/0:5,0:5:12.04:0,12,223	1/1:2,6:8:15.05:229,15,0	1/1:1,7:8:18.06:272,18,0	1/1:1,7:8:21.03:265,21,0	1/1:0,1:1:3.01:45,3,0	1/1:0,4:4:9.03:136,9,0	0/0:4,0:4:12.04:0,12,224	0/0:2,0:2:6.02:0,6,111	0/0:1,0:1:3.01:0,3,56	0/0:5,0:5:15.05:0,15,279	1/1:0,10:10:30.10:458,30,0	1/1:1,2:3:6.02:91,6,0	1/1:2,4:5:12.04:183,12,0
chr10	86798515	.	AC	A	1260.57	PASS	AB=0.867;AC=10;AF=0.179;AN=56;BaseQRankSum=4.308;DP=488;FS=4.244;HRun=8;HaplotypeScore=62.0074;InbreedingCoeff=0.7654;MQ=85.61;MQ0=0;MQRankSum=-3.880;QD=14.83;ReadPosRankSum=1.155;VQSLOD=3.7010;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:19:20.13:0,20,102	1/1:4,7:11:17.99:174,18,0	0/0:20,0:20:53.92:0,54,577	0/0:24,0:22:44.71:0,45,456	0/0:14,0:14:36.08:0,36,404	0/0:13,0:13:39.12:0,39,469	0/0:20,0:20:54.17:0,54,651	0/0:24,0:24:23.67:0,24,518	0/0:23,0:23:66.19:0,66,786	1/1:2,17:19:51.07:487,51,0	1/1:0,8:8:24.04:231,24,0	0/0:23,0:23:69.16:0,69,805	0/1:8,1:9:1.89:2,0,263	0/0:15,0:15:39.12:0,39,471	0/0:20,0:20:58.05:0,58,680	0/0:26,0:26:69.21:0,69,833	1/1:3,20:23:51.08:492,51,0	0/0:3,0:20:14.34:0,14,73	0/0:3,0:13:24.86:0,25,121	0/0:14,0:14:33.10:0,33,395	0/0:38,0:38:93.26:0,93,1097	0/0:13,0:13:36.11:0,36,434	0/0:3,0:3:9.03:0,9,109	0/0:28,0:28:69.68:0,70,831	0/0:11,0:11:24.07:0,24,290	0/1:12,3:15:37.80:38,0,355	0/0:19,0:19:45.09:0,45,515	0/0:3,0:3:9.03:0,9,109
chr10	86798981	.	A	AAG	1479.22	PASS	AB=0.937;AC=19;AF=0.339;AN=56;BaseQRankSum=5.620;DP=469;FS=1.612;HRun=0;HaplotypeScore=101.3429;InbreedingCoeff=0.2596;MQ=63.46;MQ0=2;MQRankSum=-1.482;QD=6.06;ReadPosRankSum=1.720;VQSLOD=3.2563;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:72.83:76,0,73	1/1:1,9:11:22.05:237,22,0	0/0:29,0:17:30.18:0,30,245	0/0:20,0:13:13.64:0,14,177	0/0:17,0:17:20.70:0,21,214	0/0:15,0:14:37.79:0,38,347	0/0:21,0:21:38.89:0,39,348	0/1:34,0:31:32.86:203,0,33	0/0:19,0:18:47.93:0,48,470	1/1:3,9:12:23.83:267,24,0	1/1:1,12:16:28.33:313,28,0	0/0:13,0:13:33.42:0,33,298	0/0:13,0:13:24.40:0,24,215	0/0:10,0:10:23.85:0,24,200	0/0:8,0:8:14.98:0,15,128	0/1:10,0:10:0.06:0,0,110	1/1:6,10:17:5.72:87,6,0	0/1:19,0:19:62.95:63,0,66	0/1:19,0:18:44.52:123,0,45	0/1:14,0:15:72.68:73,0,73	1/1:6,0:6:7.92:60,8,0	0/0:14,0:14:41.80:0,42,389	0/0:11,0:11:6.14:0,6,186	0/0:23,0:22:41.16:0,41,385	0/0:12,0:12:18.01:0,18,271	0/1:14,0:15:77.01:83,0,77	0/1:19,0:20:19.71:20,0,151	0/1:18,0:22:54.91:55,0,74
chr10	86799007	.	GGA	G	1572.96	PASS	AB=0.918;AC=22;AF=0.393;AN=56;BaseQRankSum=2.288;DP=366;FS=18.399;HRun=0;HaplotypeScore=77.3101;InbreedingCoeff=0.5811;MQ=62.74;MQ0=5;MQRankSum=-4.447;QD=9.31;ReadPosRankSum=-1.313;VQSLOD=1.2443;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:2.33:0,2,16	0/1:4,0:6:0.72:42,0,1	0/0:35,0:17:44.15:0,44,509	0/0:29,0:20:25.61:0,26,330	0/0:13,0:13:21.22:0,21,190	0/1:15,0:14:3.03:3,0,178	0/0:14,0:14:29.47:0,29,206	1/1:27,0:26:71.58:561,72,0	0/0:15,0:15:35.89:0,36,289	1/1:8,0:9:7.93:139,8,0	0/1:10,0:12:9.53:40,0,10	0/0:12,0:12:21.20:0,21,143	0/0:7,0:7:3.80:0,4,101	0/0:6,0:6:11.92:0,12,91	0/0:10,0:10:16.32:0,16,119	0/0:6,0:6:6.41:0,6,46	0/1:15,0:16:7.57:8,0,45	1/1:15,0:14:3.31:137,3,0	1/1:6,10:16:35.86:285,36,0	1/1:8,0:8:5.99:49,6,0	1/1:12,0:11:19.77:148,20,0	0/0:6,0:6:8.61:0,9,57	0/0:5,0:5:2.81:0,3,25	0/0:18,0:18:34.15:0,34,224	0/0:7,0:7:14.73:0,15,113	1/1:12,0:12:26.09:173,26,0	1/1:1,8:9:8.80:84,9,0	1/1:12,0:12:1.14:90,1,0
chr10	86799009	.	AGTGT	A	889.65	PASS	AB=0.933;AC=20;AF=0.417;AN=48;BaseQRankSum=-1.426;DP=381;FS=5.014;HRun=0;HaplotypeScore=90.7299;InbreedingCoeff=0.5417;MQ=60.32;MQ0=7;MQRankSum=1.695;QD=7.74;ReadPosRankSum=3.161;VQSLOD=1.7892;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:9.03:0,9,151	0/0:7,0:7:9.03:0,9,135	./.	./.	0/1:11,2:13:6.57:41,0,7	0/0:10,0:14:12.13:0,12,109	1/1:8,3:11:12.04:183,12,0	0/0:27,0:26:3.01:0,3,40	1/1:15,0:15:3.01:46,3,0	0/0:10,0:10:12.02:0,12,162	0/0:13,0:13:7.35:0,7,135	1/1:7,3:11:8.18:112,8,0	1/1:6,0:6:3.01:46,3,0	./.	1/1:5,5:10:9.03:139,9,0	1/1:3,2:5:6.02:93,6,0	0/0:21,0:21:32.79:0,33,522	0/0:17,0:14:21.34:0,21,395	0/0:16,0:16:6.02:0,6,76	0/0:10,0:10:9.03:0,9,178	0/0:14,0:12:3.01:0,3,64	1/1:3,3:6:3.01:46,3,0	./.	1/1:10,8:19:18.06:278,18,0	1/1:4,3:7:3.01:46,3,0	0/0:19,0:18:36.56:0,37,554	0/0:10,0:10:6:0,6,60	0/1:12,0:12:23.45:23,0,131
chr10	86799327	.	T	TCC	301.23	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.193;DP=381;FS=7.483;HRun=7;HaplotypeScore=56.7634;InbreedingCoeff=0.6007;MQ=87.09;MQ0=0;MQRankSum=-1.243;QD=17.72;ReadPosRankSum=-2.387;VQSLOD=0.2305;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,11:17:24.08:394,24,0	0/0:4,0:4:12.04:0,12,140	0/0:17,0:17:35.38:0,35,413	0/0:10,0:10:18.01:0,18,180	0/0:6,0:6:15.03:0,15,163	0/0:10,0:10:18.04:0,18,210	0/0:26,0:26:69.13:0,69,757	0/0:16,0:16:27.05:0,27,308	0/0:5,0:5:8.48:0,8,104	0/0:7,0:7:21.06:0,21,244	0/0:5,0:5:9.03:0,9,105	0/0:14,0:14:27.05:0,27,314	0/0:7,0:7:11.15:0,11,138	0/0:12,0:12:33.09:0,33,384	0/0:13,0:13:33.08:0,33,373	0/0:2,0:2:3.01:0,3,35	0/0:35,0:35:93.26:0,93,1083	0/0:24,0:24:66.15:0,66,742	0/0:15,0:15:24.05:0,24,279	0/0:3,0:3:6.02:0,6,70	0/0:49,0:49:99:0,120,1376	0/0:6,0:6:12.02:0,12,140	0/0:4,0:4:9.03:0,9,104	0/0:42,0:42:99:0,114,1328	0/0:11,0:11:24.04:0,24,270	0/0:9,0:9:20.26:0,20,209	0/0:7,0:7:21.06:0,21,244	0/0:5,0:5:15.04:0,15,175
chr10	86799723	.	G	GCCCC	12083.19	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=14.306;DP=530;FS=2.394;HRun=3;HaplotypeScore=107.5461;InbreedingCoeff=0.9845;MQ=78.96;MQ0=0;MQRankSum=-8.023;QD=47.76;ReadPosRankSum=0.896;VQSLOD=3.2678;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:34,3:37:90.31:1872,90,0	1/1:4,1:5:15.05:332,15,0	0/0:20,0:20:54.18:0,54,953	0/0:13,0:13:32.49:0,32,484	0/0:10,0:10:30.10:0,30,539	0/0:17,0:17:51.16:0,51,877	0/0:21,0:21:60.18:0,60,1015	1/1:22,0:22:63.12:1164,63,0	0/0:24,0:24:66.20:0,66,1128	1/1:18,0:18:51.16:895,51,0	1/1:11,0:11:27.09:556,27,0	0/0:29,0:29:87.30:0,87,1561	0/0:12,0:12:36.10:0,36,611	0/0:24,0:24:69.22:0,69,1201	0/0:21,0:21:54.16:0,54,908	0/0:28,0:28:84.26:0,84,1439	1/1:30,0:30:75.15:1492,75,0	1/1:29,0:29:72.16:1350,72,0	1/1:14,0:14:33.11:628,33,0	1/1:4,0:4:9.03:177,9,0	1/1:51,1:52:99:1904,100,0	0/0:8,0:8:24.08:0,24,432	0/0:12,0:12:30.10:0,30,539	0/0:28,0:28:13.64:0,14,1276	0/0:10,0:10:30.10:0,30,539	1/1:17,1:18:45.15:903,45,0	1/1:6,0:6:18.06:391,18,0	1/1:7,0:7:21.07:419,21,0
chr10	86799724	.	C	CCCCA	17557.49	PASS	AB=0.966;AC=27;AF=0.482;AN=56;BaseQRankSum=-1.966;DP=559;FS=1.867;HRun=0;HaplotypeScore=99.5921;InbreedingCoeff=0.9398;MQ=77.99;MQ0=0;MQRankSum=-6.753;QD=57.00;ReadPosRankSum=-0.124;VQSLOD=6.2071;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,32:40:96.33:2557,96,0	1/1:2,4:6:18.06:442,18,0	0/0:21,0:21:57.19:0,57,1070	0/0:13,0:13:27.46:0,27,568	0/0:10,0:10:30.10:0,30,581	0/0:18,0:18:51.17:0,51,976	0/0:21,0:21:63.21:0,63,1166	1/1:7,18:25:72.25:1774,72,0	0/0:24,0:24:69.23:0,69,1285	1/1:2,16:19:54.18:1346,54,0	1/1:0,12:12:27.09:736,27,0	0/0:29,0:29:87.30:0,87,1686	0/0:13,0:13:36.10:0,36,663	0/0:24,0:24:69.24:0,69,1327	0/0:20,0:20:54.18:0,54,1024	0/0:28,0:28:84.26:0,84,1559	1/1:2,28:30:74.93:2013,75,0	1/1:4,27:31:75.26:1969,75,0	1/1:2,12:15:39.12:970,39,0	1/1:0,3:3:9.03:246,9,0	1/1:12,43:58:99:2820,109,0	0/0:8,0:8:24.08:0,24,465	0/0:12,0:12:30.10:0,30,581	0/1:27,1:28:3.28:3,0,1374	0/0:10,0:10:30.10:0,30,581	1/1:7,16:26:63.21:1621,63,0	1/1:1,5:7:18.06:486,18,0	1/1:1,7:8:21.07:575,21,0
chr10	86800089	.	TTGGG	T	504.10	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.962;DP=466;FS=0.000;HRun=0;HaplotypeScore=82.9655;InbreedingCoeff=0.9404;MQ=87.30;MQ0=0;MQRankSum=-3.927;QD=38.78;ReadPosRankSum=0.199;VQSLOD=3.6368;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:45.15:0,45,1246	0/0:5,0:5:15.03:0,15,359	0/0:19,0:19:49.95:0,50,1303	0/0:19,0:18:45.02:0,45,1063	0/0:12,0:12:36.12:0,36,1006	0/0:16,0:16:45.15:0,45,1202	0/0:33,0:33:99:0,99,2702	0/0:17,0:17:51.18:0,51,1378	0/0:20,0:20:60.21:0,60,1659	0/0:10,0:10:30.10:0,30,807	0/0:8,0:8:21.07:0,21,554	0/0:28,0:28:84.29:0,84,2332	0/0:21,0:21:63.18:0,63,1673	0/0:21,0:21:63.22:0,63,1737	0/0:13,0:13:39.12:0,39,997	0/0:23,0:23:69.24:0,69,1919	0/0:20,0:20:60.14:0,60,1560	1/1:1,12:13:30.10:599,30,0	0/0:16,0:16:42.11:0,42,1069	0/0:6,0:6:18.06:0,18,502	0/0:32,0:32:81.28:0,81,2134	0/0:13,0:13:39.13:0,39,1078	0/0:11,0:11:27.09:0,27,724	0/0:25,0:25:75.26:0,75,2043	0/0:16,0:16:48.16:0,48,1274	0/0:8,0:8:24.08:0,24,671	0/0:17,0:17:51.18:0,51,1411	0/0:6,0:6:11.99:0,12,271
chr10	86800148	.	GTC	G	708.22	PASS	AC=22;AF=0.423;AN=52;BaseQRankSum=4.835;DP=302;FS=0.000;HRun=0;HaplotypeScore=48.7657;InbreedingCoeff=0.8383;MQ=90.18;MQ0=0;MQRankSum=-6.614;QD=16.10;ReadPosRankSum=-3.220;VQSLOD=2.1766;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:13,0:13:39.12:0,39,628	0/0:15,0:15:42.12:0,42,644	0/0:5,0:5:15.04:0,15,247	0/0:12,0:12:36.12:0,36,652	0/0:30,0:30:90.31:0,90,1614	1/1:5,1:6:2.99:24,3,0	0/0:21,0:21:63.11:0,63,1085	1/1:3,0:3:5.93:44,6,0	1/1:3,0:3:5.88:50,6,0	0/0:27,0:27:81.27:0,81,1419	0/0:11,0:11:30.10:0,30,542	0/0:18,0:18:54.18:0,54,979	0/0:16,0:16:48.16:0,48,833	0/0:19,0:19:54.18:0,54,982	1/1:5,1:6:8.92:111,9,0	1/1:4,0:4:11.91:113,12,0	1/1:2,4:6:8.08:115,8,0	1/1:1,0:1:3.01:46,3,0	1/1:3,2:5:9.03:110,9,0	0/0:10,0:10:24.07:0,24,433	0/0:10,0:10:30.10:0,30,519	0/0:30,1:31:90.08:0,90,1599	0/0:16,0:16:45.15:0,45,820	1/1:2,0:2:6.02:93,6,0	1/1:1,4:5:11.98:128,12,0	1/1:1,2:3:5.97:65,6,0
chr10	86800149	.	TC	T	226.69	PASS	AB=1.000;AC=20;AF=0.385;AN=52;BaseQRankSum=7.200;DP=307;FS=0.817;HRun=1;HaplotypeScore=46.7703;InbreedingCoeff=0.7823;MQ=87.53;MQ0=0;MQRankSum=-6.365;QD=5.15;ReadPosRankSum=-2.518;VQSLOD=-0.5161;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:11,0:11:32.48:0,32,420	0/0:15,0:15:38.56:0,39,436	0/0:6,0:6:15.04:0,15,212	0/0:12,0:12:36.08:0,36,530	0/0:30,0:30:90.21:0,90,1319	0/1:6,0:6:0:0,0,0	0/0:22,0:22:63.10:0,63,890	1/1:1,2:3:5.34:24,5,0	1/1:1,2:3:5.95:49,6,0	0/0:28,0:28:81.15:0,81,1182	0/0:14,0:14:33.08:0,33,491	0/0:21,0:21:57.04:0,57,814	0/0:16,0:16:48.11:0,48,697	0/0:18,0:18:54.12:0,54,794	1/1:3,2:5:8.67:65,9,0	1/1:3,1:4:11.76:76,12,0	1/1:6,0:6:4.81:32,5,0	1/1:1,0:1:2.97:20,3,0	1/1:5,0:5:8.87:56,9,0	0/0:9,0:9:24.07:0,24,356	0/0:10,0:10:30.07:0,30,441	0/0:31,0:31:85.19:0,85,1321	0/0:16,0:16:45.11:0,45,665	1/1:3,0:3:5.91:38,6,0	1/1:5,0:5:7.69:30,8,0	0/1:3,0:3:1.67:14,0,2
chr10	86800153	.	GGGA	G	234.17	PASS	AB=0.960;AC=13;AF=0.260;AN=50;BaseQRankSum=6.702;DP=336;FS=0.896;HRun=0;HaplotypeScore=76.1724;InbreedingCoeff=0.3239;MQ=84.71;MQ0=0;MQRankSum=-6.012;QD=3.50;ReadPosRankSum=-2.612;VQSLOD=1.2373;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:6:13.23:14,0,13	./.	0/0:12,0:12:35.99:0,36,576	0/0:15,0:15:32.82:0,33,553	0/0:7,0:7:21.06:0,21,379	0/0:11,0:11:33.09:0,33,636	0/0:30,0:30:84.28:0,84,1728	./.	0/0:22,0:22:66.22:0,66,1311	1/1:5,0:5:5.98:67,6,0	1/1:4,0:4:0.93:29,1,0	0/0:28,0:28:78.25:0,78,1515	0/0:15,0:15:44.98:0,45,756	0/0:21,0:21:60.19:0,60,1189	0/0:15,0:15:45.15:0,45,902	0/0:16,0:16:39.12:0,39,818	0/1:14,0:14:42.14:42,0,118	0/1:6,0:6:15.61:16,0,51	0/1:7,0:7:4.71:5,0,38	./.	1/1:12,2:14:4.97:31,5,0	0/0:9,0:9:21.14:0,21,484	0/0:10,0:10:27.09:0,27,563	0/0:34,0:34:93.24:0,93,1767	0/0:14,0:14:39.13:0,39,802	0/0:3,0:3:4.75:0,5,23	1/1:4,3:7:2.77:143,3,0	0/1:3,1:4:13.53:30,0,14
chr10	86800182	.	ATTAGGGC	A	6595.02	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=12.128;DP=406;FS=0.926;HRun=0;HaplotypeScore=106.7725;InbreedingCoeff=0.9562;MQ=88.71;MQ0=0;MQRankSum=-12.945;QD=55.89;ReadPosRankSum=-2.294;VQSLOD=4.5177;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,10:12:21.07:565,21,0	1/1:1,2:3:9.03:238,9,0	0/0:21,0:21:63.19:0,63,2412	0/0:15,0:15:45.15:0,45,1787	0/0:9,0:9:27.09:0,27,1073	0/0:12,0:12:36.12:0,36,1475	0/0:34,0:34:99:0,99,3940	1/1:1,10:11:30.04:690,30,0	0/0:26,0:26:78.23:0,78,2878	1/1:0,12:12:33.11:855,33,0	1/1:1,5:6:12.04:322,12,0	0/0:26,0:26:78.27:0,78,3195	0/0:19,0:19:51.17:0,51,1990	0/0:31,0:31:93.32:0,93,3735	0/0:16,0:16:45.15:0,45,1821	0/0:13,0:13:39.13:0,39,1478	1/1:3,10:13:24.08:645,24,0	1/1:1,5:6:15.05:404,15,0	1/1:0,14:14:42.14:1074,42,0	1/1:0,6:6:5.97:100,6,0	1/1:3,13:16:19.49:456,19,0	0/0:10,0:10:30.10:0,30,1228	0/0:8,0:8:24.08:0,24,958	0/0:35,0:35:99:0,99,3908	0/0:13,0:13:36.10:0,36,1372	1/1:0,6:6:11.76:203,12,0	1/1:0,10:10:30.10:803,30,0	1/1:0,3:3:9.03:242,9,0
chr10	86802096	.	T	TA	921.92	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=5.384;DP=346;FS=2.837;HRun=4;HaplotypeScore=61.8949;InbreedingCoeff=0.5215;MQ=53.14;MQ0=6;MQRankSum=-2.838;QD=10.98;ReadPosRankSum=1.624;VQSLOD=0.9825;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:15:41.79:467,42,0	0/0:3,0:3:2.91:0,3,18	0/0:25,0:17:48.14:0,48,542	0/0:14,0:8:24.07:0,24,272	0/0:16,0:16:45.13:0,45,510	0/0:14,0:14:42.12:0,42,476	0/0:10,0:9:18.05:0,18,204	0/1:17,0:16:49.96:50,0,88	0/0:10,0:10:27.08:0,27,306	0/0:8,0:7:17.45:0,17,100	0/0:11,0:11:20.56:0,21,145	0/0:12,0:12:30.09:0,30,340	0/0:11,0:11:21.06:0,21,238	0/0:4,0:4:9.02:0,9,102	0/0:8,0:8:21.04:0,21,227	0/0:9,0:9:20.63:0,21,238	0/0:17,0:18:26.18:0,26,150	1/1:9,10:18:41.97:502,42,0	0/0:13,0:12:19.75:0,20,115	0/0:10,0:10:5.37:0,5,47	0/0:13,0:13:11.35:0,11,93	0/0:10,0:10:29.95:0,30,321	0/0:11,0:11:33.09:0,33,374	0/0:17,0:17:45.13:0,45,511	0/0:15,0:15:45.11:0,45,499	0/1:14,0:12:2.20:15,0,2	0/1:10,0:10:14.10:14,0,50	1/1:9,0:9:1.03:21,1,0
chr10	86802098	.	AAAC	A	2114.43	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=9.564;DP=347;FS=10.405;HRun=0;HaplotypeScore=67.1996;InbreedingCoeff=0.5011;MQ=53.23;MQ0=5;MQRankSum=-6.254;QD=15.21;ReadPosRankSum=2.302;VQSLOD=2.1924;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:38.19:630,38,0	1/1:3,0:3:2.22:7,2,0	0/0:28,0:20:54.16:0,54,758	0/0:14,0:9:27.08:0,27,387	0/0:16,0:16:45.14:0,45,783	0/0:15,0:15:45.11:0,45,805	0/0:10,0:9:18.05:0,18,238	0/1:17,0:16:91.83:101,0,92	0/0:10,0:10:27.09:0,27,511	1/1:8,0:7:14.48:50,14,0	0/1:12,0:12:34.70:35,0,45	0/0:12,0:12:30.09:0,30,489	0/0:9,0:9:21.07:0,21,430	0/0:4,0:4:9.03:0,9,170	0/0:8,0:8:21.05:0,21,363	0/0:9,0:9:21.07:0,21,443	0/0:18,0:18:3.20:0,3,74	1/1:12,6:17:45.11:616,45,0	0/1:13,0:12:57.15:57,0,88	0/1:9,0:9:27.66:120,0,28	0/1:11,0:11:54.05:54,0,64	0/0:10,0:10:16.06:0,16,566	0/0:13,0:13:36.10:0,36,651	0/0:17,0:17:48.16:0,48,986	0/0:15,0:15:45.13:0,45,841	1/1:13,0:11:12.98:236,13,0	1/1:11,0:11:5.83:152,6,0	1/1:9,0:9:11.09:244,11,0
chr10	86802100	.	AC	A	952.39	PASS	AB=0.811;AC=19;AF=0.339;AN=56;BaseQRankSum=10.847;DP=339;FS=9.325;HRun=1;HaplotypeScore=59.4059;InbreedingCoeff=0.5441;MQ=53.25;MQ0=5;MQRankSum=-5.622;QD=7.00;ReadPosRankSum=0.609;VQSLOD=-0.0695;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:34.72:143,35,0	1/1:3,0:3:5.57:39,6,0	0/0:27,1:20:54.14:0,54,733	0/0:14,0:9:27.05:0,27,361	0/0:15,0:15:45.15:0,45,656	0/0:15,0:15:45.12:0,45,637	0/0:10,0:9:18.05:0,18,239	0/1:13,2:14:29.96:57,0,30	0/0:9,0:9:27.09:0,27,397	1/1:8,0:7:0.72:2,1,0	0/1:11,1:12:20.98:21,0,45	0/0:12,0:12:30.10:0,30,433	0/0:9,0:9:21.07:0,21,307	0/0:4,0:4:9.02:0,9,132	0/0:7,0:7:21.05:0,21,287	0/0:7,0:7:21.05:0,21,292	0/0:18,0:18:15.22:0,15,60	1/1:18,0:17:26.69:107,27,0	0/1:10,3:12:41.22:41,0,44	0/1:5,5:10:5.42:120,0,5	0/1:7,3:10:35.07:52,0,35	0/0:10,0:10:26.09:0,26,400	0/0:13,0:13:36.10:0,36,509	0/0:17,0:17:48.16:0,48,706	0/0:15,0:15:45.13:0,45,642	1/1:3,10:11:21.22:208,21,0	1/1:8,3:11:12.01:157,12,0	1/1:1,8:9:16.55:194,17,0
chr10	86802102	.	AAAC	A	976.22	PASS	AB=0.859;AC=18;AF=0.321;AN=56;BaseQRankSum=11.529;DP=343;FS=27.355;HRun=0;HaplotypeScore=71.1360;InbreedingCoeff=0.4043;MQ=52.88;MQ0=5;MQRankSum=-6.037;QD=6.97;ReadPosRankSum=3.354;VQSLOD=0.8667;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:27.89:151,28,0	1/1:3,0:3:2.22:7,2,0	0/0:29,0:21:60.18:0,60,868	0/0:15,0:9:27.08:0,27,409	0/0:15,0:15:45.15:0,45,805	0/0:15,0:15:45.15:0,45,867	0/0:11,0:10:24.02:0,24,303	0/1:15,2:16:24.47:24,0,134	0/0:9,0:9:27.09:0,27,523	1/1:8,0:7:13.75:44,14,0	0/1:12,0:12:34.42:34,0,46	0/0:12,0:12:30.08:0,30,473	0/0:8,0:8:21.07:0,21,442	0/0:4,0:4:11.90:0,12,189	0/0:6,0:6:15.05:0,15,312	0/0:7,0:7:18.06:0,18,415	0/0:18,0:18:3.32:0,3,75	0/1:20,0:19:16.46:16,0,31	0/1:11,3:13:57.08:57,0,88	0/1:5,5:10:24.83:137,0,25	0/1:7,3:10:53.97:54,0,64	0/0:10,0:10:17.94:0,18,578	0/0:13,0:13:39.13:0,39,742	0/0:17,0:17:48.16:0,48,1007	0/0:14,0:14:42.13:0,42,805	1/1:3,10:11:15.93:258,16,0	1/1:7,3:10:4.50:130,4,0	1/1:1,8:9:11.05:244,11,0
chr10	86802124	.	ACAAAC	A	1113.42	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=9.133;DP=270;FS=7.784;HRun=0;HaplotypeScore=66.2034;InbreedingCoeff=0.5249;MQ=53.15;MQ0=4;MQRankSum=-3.361;QD=11.84;ReadPosRankSum=1.996;VQSLOD=1.3974;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:27.57:0,28,101	1/1:0,1:1:3.01:70,3,0	0/0:23,0:14:39:0,39,720	0/0:18,0:12:35.97:0,36,443	0/0:9,0:9:27.09:0,27,774	0/0:11,0:11:33.10:0,33,952	0/0:6,0:6:18.01:0,18,267	0/0:14,0:13:24.57:0,25,393	0/0:6,0:6:18.06:0,18,563	1/1:0,9:9:24.04:465,24,0	1/1:1,10:11:26.96:429,27,0	0/0:7,0:7:15.05:0,15,378	0/0:7,0:7:18.06:0,18,510	0/0:3,0:3:8.96:0,9,195	0/0:4,0:4:12.04:0,12,372	0/0:7,0:7:21.07:0,21,599	1/1:1,11:12:9.03:209,9,0	0/1:15,0:14:4.84:5,0,27	0/1:6,0:6:3.03:3,0,61	0/1:7,0:7:14.59:15,0,40	0/1:5,0:5:2.58:3,0,43	0/0:9,0:9:20.08:0,20,744	0/0:12,0:12:36.10:0,36,830	0/0:15,0:15:42.12:0,42,1237	0/0:12,0:12:36.10:0,36,992	1/1:12,0:10:0.12:28,0,0	1/1:7,0:7:11.71:32,12,0	0/1:9,0:9:16.50:27,0,16
chr10	86802126	.	AAAC	A	1302.84	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=10.610;DP=266;FS=10.236;HRun=0;HaplotypeScore=57.4156;InbreedingCoeff=0.5991;MQ=59.72;MQ0=4;MQRankSum=-5.492;QD=10.86;ReadPosRankSum=0.816;VQSLOD=1.4710;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:12:32.70:484,33,0	1/1:1,0:1:2.99:24,3,0	0/0:22,0:14:30.10:0,30,523	0/0:19,0:13:25.38:0,25,299	0/0:9,0:9:27.09:0,27,527	0/0:11,0:11:30.10:0,30,651	0/0:6,0:6:15.03:0,15,168	0/1:14,0:13:22.31:22,0,242	0/0:6,0:6:18.06:0,18,391	1/1:9,0:9:21.41:167,21,0	1/1:11,0:11:17.70:122,18,0	0/0:6,0:6:15.02:0,15,244	0/0:6,0:6:18.03:0,18,311	0/0:3,0:3:6.02:0,6,108	0/0:4,0:4:12.04:0,12,249	0/0:7,0:7:21.07:0,21,420	1/1:12,0:12:8.98:72,9,0	0/1:15,0:14:2.77:12,0,3	1/1:6,0:6:8.85:56,9,0	0/1:7,0:7:17.39:74,0,17	0/1:5,0:5:17.01:52,0,17	0/0:9,0:9:8.11:0,8,502	0/0:12,0:12:30.05:0,30,494	0/0:15,0:15:42.14:0,42,863	0/0:11,0:11:33.11:0,33,669	1/1:12,0:10:19.41:144,19,0	1/1:7,0:7:20.79:147,21,0	0/1:9,0:9:2.29:123,0,2
chr10	86802263	.	GA	G	330.47	PASS	AB=0.929;AC=6;AF=0.130;AN=46;BaseQRankSum=1.122;DP=129;FS=41.377;HRun=9;HaplotypeScore=32.6291;InbreedingCoeff=0.3774;MQ=78.46;MQ0=0;MQRankSum=-1.835;QD=11.02;ReadPosRankSum=-1.101;VQSLOD=-0.4679;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:6:11.26:31,11,0	0/0:1,0:1:2.96:0,3,19	0/1:5,0:4:18.49:20,0,18	0/1:5,1:6:5.74:46,0,6	0/0:2,0:2:3.01:0,3,34	0/0:5,0:5:15.04:0,15,173	0/0:1,0:1:3.01:0,3,35	0/0:18,0:18:41.40:0,41,280	0/0:3,0:3:9.03:0,9,103	0/0:5,0:5:14.55:0,15,82	./.	0/0:3,0:3:9.03:0,9,104	./.	0/0:1,0:1:3.01:0,3,35	0/0:1,0:1:3.01:0,3,35	./.	0/0:10,0:10:20.79:0,21,146	1/1:0,13:13:39.02:357,39,0	0/0:7,0:7:12.76:0,13,85	0/0:2,0:2:5.91:0,6,38	0/0:5,0:5:14.78:0,15,95	0/0:2,0:2:6.02:0,6,69	./.	0/0:3,0:3:9.03:0,9,104	./.	0/0:7,0:7:20.72:0,21,144	0/0:12,0:12:35.72:0,36,258	0/0:11,0:11:32.71:0,33,230
chr10	86802391	.	G	GT	431.75	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=3.114;DP=212;FS=6.885;HRun=3;HaplotypeScore=32.1114;InbreedingCoeff=0.6478;MQ=71.05;MQ0=0;MQRankSum=-0.481;QD=9.39;ReadPosRankSum=-0.345;VQSLOD=0.5228;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:20.80:0,21,59	1/1:3,0:3:6.02:73,6,0	0/0:20,0:8:13.35:0,13,109	0/1:19,0:13:1.83:2,0,45	0/0:12,0:12:30.08:0,30,348	0/0:11,0:11:30.09:0,30,357	0/0:6,0:6:15.03:0,15,168	0/0:16,0:16:45.14:0,45,535	0/0:2,0:2:6.02:0,6,72	1/1:2,5:7:12.86:118,13,0	1/1:0,4:4:11.99:122,12,0	0/0:5,0:5:15.05:0,15,180	0/0:7,0:7:18.06:0,18,216	0/0:3,0:3:9.03:0,9,108	0/0:7,0:7:18.06:0,18,216	0/0:2,0:2:3.01:0,3,36	1/1:4,9:13:24.89:262,25,0	0/0:3,0:3:5.45:0,5,15	0/0:10,0:10:27.06:0,27,323	0/0:7,0:7:21.06:0,21,252	0/0:5,0:5:15.05:0,15,178	0/0:1,0:1:3.01:0,3,36	0/0:3,0:3:6.02:0,6,72	0/0:1,0:1:3.01:0,3,36	0/0:10,0:9:24.07:0,24,288	0/0:5,0:5:15.05:0,15,179	0/0:7,0:7:21.06:0,21,252	0/0:5,0:5:9:0,9,84
chr10	86802394	.	TG	T	765.16	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=3.312;DP=205;FS=3.584;HRun=1;HaplotypeScore=30.0174;InbreedingCoeff=0.7267;MQ=70.80;MQ0=0;MQRankSum=-3.408;QD=11.59;ReadPosRankSum=-0.383;VQSLOD=1.5593;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:40.16:575,40,0	1/1:3,0:3:8.85:61,9,0	0/1:20,0:8:3.40:3,0,112	0/0:18,0:12:11.47:0,11,135	0/0:12,0:12:33.10:0,33,447	0/0:11,0:11:30.03:0,30,402	0/0:6,0:6:18.04:0,18,229	0/0:16,0:16:45.12:0,45,592	0/0:2,0:2:6.02:0,6,84	1/1:5,0:5:13.14:94,13,0	1/1:4,0:4:7.97:26,8,0	0/0:5,0:5:15.05:0,15,212	0/0:6,0:6:18.04:0,18,237	0/0:3,0:3:9.03:0,9,127	0/0:6,0:6:18.06:0,18,255	0/0:1,0:1:3.01:0,3,42	1/1:12,0:12:18.37:108,18,0	1/1:1,3:4:8.97:70,9,0	0/0:10,0:10:29.99:0,30,399	0/0:7,0:7:21.07:0,21,296	0/0:5,0:5:15.01:0,15,175	0/0:1,0:1:3.01:0,3,42	0/0:3,0:3:9.03:0,9,120	0/0:1,0:1:3.01:0,3,43	0/0:9,0:8:24.08:0,24,343	0/0:5,0:5:15.03:0,15,193	0/0:7,0:7:21.05:0,21,279	0/0:5,0:5:9.01:0,9,96
chr10	86802602	.	A	AT	158.78	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.153;DP=302;FS=1.311;HRun=6;HaplotypeScore=79.6746;InbreedingCoeff=0.5123;MQ=47.45;MQ0=1;MQRankSum=-2.434;QD=7.94;ReadPosRankSum=-0.637;VQSLOD=0.1815;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:12:0.01:14,0,0	0/0:2,0:2:5.94:0,6,41	0/0:3,0:3:5.88:0,6,37	0/0:11,0:7:14.27:0,14,89	0/0:13,0:13:33.23:0,33,200	0/0:12,0:12:29.94:0,30,169	0/0:21,0:21:44.28:0,44,272	0/0:19,0:19:51.08:0,51,500	0/0:13,0:13:27.17:0,27,151	0/0:3,0:3:8.82:0,9,57	0/0:1,0:1:2.98:0,3,22	0/0:21,0:21:13.38:0,13,182	0/0:20,0:20:41.68:0,42,230	0/0:18,0:18:16.54:0,17,75	0/0:19,0:19:39.63:0,40,235	0/0:14,0:14:33.15:0,33,195	0/0:10,0:10:23.77:0,24,165	1/1:0,6:7:21.06:246,21,0	0/0:10,0:9:26.03:0,26,226	0/0:2,0:2:6:0,6,54	0/0:2,0:2:3.01:0,3,30	0/0:7,0:7:20.30:0,20,146	0/0:11,0:11:21.13:0,21,125	0/0:19,0:19:33.50:0,34,167	0/0:12,0:12:32.07:0,32,152	0/0:3,0:3:5.60:0,6,40	0/0:13,0:13:35.41:0,35,331	0/0:3,0:3:8.98:0,9,76
chr10	86802608	.	TG	T	289.24	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=-1.152;DP=346;FS=15.065;HRun=1;HaplotypeScore=81.9050;InbreedingCoeff=0.5507;MQ=49.39;MQ0=1;MQRankSum=-4.393;QD=9.97;ReadPosRankSum=-0.102;VQSLOD=0.0771;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:13:35.72:254,36,0	0/0:2,0:2:5.59:0,6,26	0/0:10,0:9:26.20:0,26,221	0/0:14,0:10:23.60:0,24,281	0/0:16,0:16:48.06:0,48,583	0/0:13,0:13:39.11:0,39,509	0/0:23,0:23:66.17:0,66,850	0/0:23,0:23:66.18:0,66,877	0/0:16,0:16:42.08:0,42,511	0/1:5,0:5:22.01:43,0,22	0/1:3,0:3:6.69:46,0,7	0/0:21,0:21:60.17:0,60,779	0/0:21,0:21:57.16:0,57,737	0/0:18,0:18:45.05:0,45,538	0/0:19,0:19:48.15:0,48,654	0/0:15,0:15:45.12:0,45,589	0/0:11,0:11:1.80:0,2,77	1/1:7,0:7:18.86:81,19,0	0/0:11,0:10:30.06:0,30,410	0/0:3,0:3:9.02:0,9,113	0/0:5,0:5:11.97:0,12,113	0/0:8,0:8:24.07:0,24,321	0/0:9,0:9:26.98:0,27,345	0/0:22,0:22:57.06:0,57,716	0/0:14,0:14:41.33:0,41,534	0/0:4,0:4:9.02:0,9,105	0/0:14,0:14:42.11:0,42,582	0/0:5,0:5:12.02:0,12,147
chr10	86802611	.	TG	T	176.49	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.059;DP=361;FS=2.781;HRun=1;HaplotypeScore=85.0724;InbreedingCoeff=0.7550;MQ=49.98;MQ0=0;MQRankSum=-4.268;QD=11.03;ReadPosRankSum=0.774;VQSLOD=1.8831;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:15:38.69:271,39,0	0/0:2,0:2:6.02:0,6,93	0/0:11,0:10:30.02:0,30,404	0/0:17,0:13:28.86:0,29,402	0/0:16,0:16:48.16:0,48,746	0/0:13,0:13:39.13:0,39,611	0/0:23,0:23:66.22:0,66,1036	0/0:24,0:24:69.23:0,69,1085	0/0:17,0:17:45.15:0,45,689	0/0:6,0:6:17.82:0,18,212	0/0:3,0:3:8.82:0,9,79	0/0:22,0:22:63.20:0,63,972	0/0:22,0:22:60.20:0,60,944	0/0:18,0:18:45.15:0,45,715	0/0:19,0:19:51.17:0,51,790	0/0:16,0:16:48.16:0,48,753	0/0:10,0:10:30.03:0,30,409	0/0:9,0:9:21.28:0,21,165	0/0:10,0:10:30.10:0,30,478	0/0:3,0:3:9.03:0,9,144	0/0:5,0:5:12.04:0,12,191	0/0:9,0:9:27.08:0,27,402	0/0:9,0:9:24.08:0,24,378	0/0:22,0:22:57.19:0,57,894	0/0:15,0:15:42.14:0,42,665	0/0:5,0:5:15.05:0,15,223	0/0:14,0:14:42.14:0,42,668	0/0:5,0:5:12.04:0,12,191
chr10	86802947	.	AAG	A	666.44	PASS	AB=0.989;AC=12;AF=0.214;AN=56;BaseQRankSum=1.624;DP=414;FS=1.643;HRun=0;HaplotypeScore=63.3015;InbreedingCoeff=-0.0934;MQ=49.03;MQ0=12;MQRankSum=-0.974;QD=3.11;ReadPosRankSum=-5.420;VQSLOD=0.1714;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,37:40:55.53:630,56,0	0/0:6,0:6:13.06:0,13,150	0/0:6,0:1:2.99:0,3,23	0/0:10,0:5:5.76:0,6,37	0/0:19,0:19:11.81:0,12,296	0/0:12,0:12:29.90:0,30,335	0/0:8,0:8:4.31:0,4,101	0/1:25,1:24:37.41:37,0,347	0/0:13,0:13:15.11:0,15,227	0/1:12,1:12:14.52:15,0,164	0/0:12,0:12:18.01:0,18,169	0/1:11,0:11:2.40:2,0,178	0/0:11,0:11:28.09:0,28,254	0/0:7,0:7:15.33:0,15,151	0/0:15,0:15:27.56:0,28,313	0/1:15,0:15:2.27:2,0,220	0/1:34,0:34:11.76:12,0,505	0/1:15,0:15:62.79:63,0,120	0/1:23,0:19:7.86:8,0,289	0/0:12,0:12:5.71:0,6,178	0/0:9,0:8:2.75:0,3,67	0/1:5,0:5:14.07:14,0,54	0/1:16,0:15:12.53:13,0,281	0/0:8,0:7:14.76:0,15,112	0/0:15,0:15:33.82:0,34,393	0/1:14,0:14:13.09:13,0,250	0/0:23,0:21:4.19:0,4,145	0/0:14,0:14:13.23:0,13,196
chr10	86802949	.	G	GAAAAGA	1573.22	PASS	AB=0.964;AC=16;AF=0.286;AN=56;BaseQRankSum=-2.009;DP=426;FS=12.540;HRun=0;HaplotypeScore=101.7386;InbreedingCoeff=0.4396;MQ=49.10;MQ0=12;MQRankSum=-3.158;QD=6.93;ReadPosRankSum=-3.479;VQSLOD=0.2177;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:41:3.28:3,0,375	0/0:6,0:6:10.77:0,11,64	0/0:9,0:1:0:0,0,0	0/1:11,0:5:0.98:1,0,7	0/0:21,0:21:36.02:0,36,328	0/0:11,0:12:12.55:0,13,446	0/0:7,0:8:16.87:0,17,140	0/1:22,0:25:36.61:249,0,37	0/0:14,0:14:32.02:0,32,352	0/1:13,0:12:33.97:34,0,82	0/0:9,0:13:7.68:0,8,69	0/0:11,0:11:19.08:0,19,150	0/0:11,0:11:25.05:0,25,208	0/0:7,0:7:20.53:0,21,187	0/0:13,0:13:17.84:0,18,204	0/0:14,0:15:12.86:0,13,316	0/1:31,0:33:44.45:44,0,159	0/0:15,0:15:11.04:0,11,133	1/1:10,9:22:20.06:394,20,0	1/1:8,0:12:18.27:215,18,0	1/1:5,0:6:8.85:58,9,0	0/0:4,0:5:9.70:0,10,93	0/0:15,0:14:29.74:0,30,397	0/0:7,0:7:17.91:0,18,198	0/0:15,0:16:35.44:0,35,371	1/1:14,0:14:15.78:248,16,0	1/1:6,13:24:4.35:295,4,0	0/1:14,0:14:28.79:203,0,29
chr10	86802953	.	A	AG	296.84	PASS	AB=0.932;AC=7;AF=0.130;AN=54;BaseQRankSum=-1.710;DP=421;FS=15.827;HRun=0;HaplotypeScore=66.8534;InbreedingCoeff=-0.1290;MQ=50.25;MQ0=11;MQRankSum=-2.502;QD=2.45;ReadPosRankSum=0.396;VQSLOD=0.7591;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:44:66.55:0,67,514	0/0:7,0:7:17.33:0,17,106	./.	0/0:10,0:4:11.54:0,12,77	0/0:19,0:19:56.62:0,57,507	0/0:13,0:13:35.28:0,35,370	0/0:8,0:8:20.89:0,21,177	0/1:28,0:26:69.82:70,0,251	0/0:13,0:13:36.03:0,36,359	0/0:13,0:12:20.79:0,21,223	0/0:12,0:12:14.68:0,15,119	0/0:10,0:10:26.94:0,27,233	0/0:11,0:11:28.22:0,28,231	0/0:7,0:7:20.95:0,21,211	0/0:12,0:12:23.96:0,24,228	0/0:16,0:16:43.77:0,44,425	0/0:34,0:34:70.82:0,71,475	0/0:15,0:15:41.71:0,42,284	0/1:24,0:20:50.47:50,0,178	0/1:11,0:11:10.52:57,0,11	0/1:6,1:6:22.23:22,0,38	0/0:7,0:7:17.98:0,18,167	0/0:15,0:14:39.03:0,39,427	0/0:9,0:8:18.04:0,18,198	0/0:15,0:15:44.80:0,45,430	0/1:7,8:15:95.50:146,0,96	0/1:23,0:21:20.43:20,0,82	0/1:13,0:13:59.98:60,0,102
chr10	86804453	.	TG	T	6266.70	PASS	AB=0.883;AC=54;AF=0.964;AN=56;BaseQRankSum=1.029;DP=375;FS=3.685;HRun=5;HaplotypeScore=149.1182;InbreedingCoeff=-0.0399;MQ=62.21;MQ0=1;MQRankSum=-2.765;QD=16.71;ReadPosRankSum=3.618;VQSLOD=3.3980;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,15:26:45.07:278,45,0	1/1:0,8:8:20.46:137,20,0	0/1:9,1:9:24.29:24,0,47	0/1:10,2:11:16.90:48,0,17	1/1:3,3:6:11.83:78,12,0	1/1:2,15:17:46.70:324,47,0	1/1:6,10:16:38.72:290,39,0	1/1:4,5:9:20.90:156,21,0	1/1:3,13:16:44.55:311,45,0	1/1:5,11:16:47.68:355,48,0	1/1:4,2:6:10.96:71,11,0	1/1:6,9:15:41.12:297,41,0	1/1:5,12:17:50.39:352,50,0	1/1:1,10:11:29.57:196,30,0	1/1:5,13:18:50.57:362,51,0	1/1:0,13:13:38.71:278,39,0	1/1:4,18:22:59.57:431,60,0	1/1:4,8:11:26.82:196,27,0	1/1:2,9:11:32.28:245,32,0	1/1:2,7:10:27.87:177,28,0	1/1:10,24:34:51.09:392,51,0	1/1:1,10:11:32.41:214,32,0	1/1:4,4:8:20.19:130,20,0	1/1:2,4:6:8.32:69,8,0	1/1:0,13:13:29.18:199,29,0	1/1:1,6:7:20.54:140,21,0	1/1:2,18:20:58.91:409,59,0	1/1:0,5:5:14.89:108,15,0
chr10	86804457	.	GGT	G	11476.73	PASS	AB=0.958;AC=54;AF=0.964;AN=56;BaseQRankSum=-1.572;DP=375;FS=3.717;HRun=0;HaplotypeScore=142.0997;InbreedingCoeff=-0.0402;MQ=59.63;MQ0=1;MQRankSum=-4.155;QD=30.60;ReadPosRankSum=2.940;VQSLOD=6.6552;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,2:22:53.81:562,54,0	1/1:9,0:9:23.93:276,24,0	0/1:9,0:8:39.99:40,0,109	0/1:9,1:10:8.38:131,0,8	1/1:5,0:6:12.04:151,12,0	1/1:19,0:19:51:606,51,0	1/1:14,1:15:42:520,42,0	1/1:8,1:9:21.07:282,21,0	1/1:16,1:17:50.90:582,51,0	1/1:15,1:16:48.14:612,48,0	1/1:3,0:4:11.97:116,12,0	1/1:14,2:16:47.90:567,48,0	1/1:16,1:17:51.15:638,51,0	1/1:11,0:11:30.09:357,30,0	1/1:17,1:18:51.16:653,51,0	1/1:13,0:13:39.12:483,39,0	1/1:21,2:23:63.02:779,63,0	1/1:9,1:9:27.09:344,27,0	1/1:11,0:12:33.09:420,33,0	1/1:9,0:10:29.96:330,30,0	1/1:32,3:35:56.83:697,57,0	1/1:11,1:12:35.97:422,36,0	1/1:7,0:7:21.04:242,21,0	1/1:7,1:8:9.02:120,9,0	1/1:14,0:14:30.07:360,30,0	1/1:6,0:7:21.05:261,21,0	1/1:20,0:20:60.12:732,60,0	1/1:5,0:5:15.05:190,15,0
chr10	86804872	.	CT	C	4912.69	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.244;DP=634;FS=6.000;HRun=5;HaplotypeScore=69.1891;InbreedingCoeff=0.9721;MQ=73.23;MQ0=0;MQRankSum=-1.671;QD=29.07;ReadPosRankSum=2.062;VQSLOD=5.5139;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1349	0/0:11,0:11:33.10:0,33,435	0/0:14,0:14:32.93:0,33,380	0/0:18,0:18:38.14:0,38,385	0/0:16,0:16:46.03:0,46,603	0/0:14,0:14:36.11:0,36,475	0/0:31,0:31:93.30:0,93,1255	1/1:5,21:26:57.14:637,57,0	0/0:25,0:25:72.23:0,72,970	0/0:28,0:28:75.17:0,75,997	0/0:12,0:12:33.08:0,33,419	0/0:26,0:26:75.21:0,75,966	0/0:21,0:21:57.16:0,57,734	0/0:24,0:24:69.23:0,69,943	0/0:31,0:31:90.28:0,90,1189	0/0:23,0:23:63.19:0,63,831	0/0:33,0:33:96.23:0,96,1224	0/0:22,0:22:57.17:0,57,749	1/1:1,22:23:69.20:780,69,0	1/1:2,15:17:42.12:476,42,0	1/1:0,50:50:99:1564,138,0	0/0:18,0:18:45.13:0,45,586	0/0:23,0:23:63.11:0,63,765	0/0:29,0:29:84.20:0,84,1081	0/0:11,0:11:24.06:0,24,296	1/1:3,19:22:4.08:435,4,0	1/1:0,22:22:63.18:714,63,0	1/1:0,9:9:27.08:306,27,0
chr10	86806548	.	T	TGAA	327.81	PASS	AB=1.000;AC=21;AF=0.525;AN=40;BaseQRankSum=3.285;DP=510;FS=16.243;HRun=0;HaplotypeScore=77.8562;InbreedingCoeff=0.4553;MQ=59.82;MQ0=12;MQRankSum=-4.304;QD=1.42;ReadPosRankSum=-3.152;VQSLOD=-0.2971;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/1:11,0:10:0:0,0,0	./.	./.	0/0:23,0:23:21.01:0,21,250	0/0:12,0:12:9.03:0,9,112	1/1:34,0:32:6.02:89,6,0	./.	0/0:19,0:18:15:0,15,170	1/1:24,0:21:5.20:37,5,0	1/1:19,0:19:5.71:32,6,0	0/1:16,0:16:15.68:16,0,168	1/1:12,3:16:3.01:56,3,0	0/0:14,0:14:6.02:0,6,75	0/0:16,0:18:17.93:0,18,144	0/0:12,0:12:14.19:0,14,186	1/1:15,0:14:5.96:70,6,0	./.	./.	1/1:19,0:15:1.55:4,2,0	./.	0/1:19,0:19:22.32:22,0,96	1/1:16,7:24:3.01:56,3,0	0/0:18,0:25:5.95:0,6,42	0/0:18,0:19:8.98:0,9,73	1/1:20,0:18:4.56:32,5,0	1/1:14,0:13:3.48:54,3,0	./.
chr10	86806739	.	AC	A	894.25	PASS	AB=0.857;AC=25;AF=0.893;AN=28;BaseQRankSum=-1.805;DP=56;FS=0.000;HRun=1;HaplotypeScore=14.1232;InbreedingCoeff=0.1190;MQ=54.82;MQ0=2;MQRankSum=-1.065;QD=23.53;ReadPosRankSum=-0.139;VQSLOD=3.1689;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:5,1:0:8.58:9,0,18	./.	./.	1/1:0,3:3:6.02:81,6,0	0/0:3,0:2:2.99:0,3,24	./.	1/1:0,2:1:3.01:42,3,0	./.	./.	1/1:0,3:3:6.02:84,6,0	1/1:0,3:2:6.02:84,6,0	1/1:0,2:2:3.01:42,3,0	1/1:0,2:2:6.02:84,6,0	1/1:0,1:1:3.01:42,3,0	./.	./.	./.	./.	./.	1/1:0,3:2:6.02:84,6,0	1/1:0,2:2:6.02:83,6,0	1/1:0,6:6:12.04:159,12,0	1/1:1,3:4:12.04:155,12,0	1/1:0,1:1:3.01:38,3,0	./.	./.
chr10	86806798	.	GGAGGAA	G	388.39	PASS	AB=0.982;AC=14;AF=0.280;AN=50;BaseQRankSum=6.237;DP=674;FS=5.371;HRun=0;HaplotypeScore=90.2906;InbreedingCoeff=0.2380;MQ=29.39;MQ0=211;MQRankSum=-6.630;QD=1.38;ReadPosRankSum=0.438;VQSLOD=1.2263;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,1:14:72.92:73,0,143	1/1:7,4:7:2.96:19,3,0	./.	./.	0/0:18,0:13:34.36:0,34,967	0/0:28,0:17:33.10:0,33,917	0/0:59,0:30:65.89:0,66,1205	1/1:50,0:8:9.53:59,10,0	0/0:22,0:16:41.98:0,42,709	0/1:39,2:15:30.98:31,0,138	1/1:9,3:6:6.02:134,6,0	0/0:20,0:12:27.09:0,27,672	0/0:20,0:16:29.81:0,30,685	0/0:17,0:9:15.05:0,15,360	0/0:23,0:13:27.07:0,27,561	0/0:25,0:14:27.08:0,27,592	0/1:33,1:13:19.51:20,0,86	0/1:22,0:6:23.63:27,0,24	1/1:46,0:6:3.01:47,3,0	0/0:9,0:5:3.01:0,3,44	0/0:36,0:8:3.66:0,4,22	0/0:27,0:16:30.10:0,30,785	0/0:22,0:13:18.42:0,18,422	0/0:36,0:24:50.57:0,51,1135	0/0:20,0:15:39.03:0,39,779	0/1:31,0:16:99:110,0,120	0/1:7,0:4:14.10:20,0,14	./.
chr10	86806810	.	GGAA	G	301.79	PASS	AB=0.959;AC=12;AF=0.231;AN=52;BaseQRankSum=6.934;DP=677;FS=0.776;HRun=0;HaplotypeScore=94.4083;InbreedingCoeff=0.2143;MQ=32.05;MQ0=181;MQRankSum=-6.316;QD=1.30;ReadPosRankSum=-0.251;VQSLOD=1.4810;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:15:21.60:22,0,141	0/0:11,0:7:2.97:0,3,20	./.	./.	0/0:19,0:17:43.37:0,43,844	0/0:26,0:17:33.06:0,33,620	0/0:61,0:31:45.22:0,45,1079	0/1:36,2:5:38.59:39,0,53	0/0:25,0:19:50.77:0,51,907	0/1:46,1:22:50.47:50,0,93	1/1:12,0:6:5.34:27,5,0	0/0:21,0:12:30.01:0,30,592	0/0:24,0:20:44.58:0,45,811	0/0:21,0:12:24.02:0,24,413	0/0:24,0:13:24.01:0,24,500	0/0:29,0:18:36.05:0,36,665	0/0:35,0:18:19.10:0,19,204	0/1:23,0:7:8.51:9,0,74	0/1:32,3:9:26.21:26,0,34	0/0:6,0:5:3.01:0,3,59	0/0:33,0:8:1.81:0,2,34	0/0:29,1:19:36.07:0,36,690	0/0:22,0:13:23.68:0,24,442	0/0:36,0:27:51.26:0,51,1063	0/0:21,0:16:44.92:0,45,797	0/1:26,3:15:87.89:165,0,88	1/1:6,2:6:11.82:77,12,0	1/1:11,0:5:5.88:36,6,0
chr10	86806834	.	AGAAGAGGAAGAG	A	2054.24	PASS	AB=0.994;AC=15;AF=0.288;AN=52;BaseQRankSum=9.397;DP=595;FS=1.221;HRun=0;HaplotypeScore=169.8214;InbreedingCoeff=0.4603;MQ=38.54;MQ0=101;MQRankSum=-9.316;QD=10.76;ReadPosRankSum=-1.262;VQSLOD=2.3469;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:19:19.58:0,20,195	1/1:8,0:6:3.01:59,3,0	./.	./.	0/0:20,0:19:54.19:0,54,2129	0/0:23,0:18:35.42:0,35,1289	0/0:41,0:26:60.99:0,61,2153	0/1:32,0:9:50.17:50,0,162	0/0:23,0:21:59.99:0,60,2596	1/1:32,3:21:46.66:1004,47,0	1/1:8,0:4:2.76:38,3,0	0/0:21,0:13:33.08:0,33,1292	0/0:23,0:19:48.15:0,48,1758	0/0:25,0:19:42.14:0,42,1503	0/0:24,0:18:42.14:0,42,1747	0/0:28,0:19:11.67:0,12,1273	0/1:29,1:21:78.69:367,0,79	0/0:21,0:7:12.80:0,13,173	0/1:24,0:8:6.81:22,0,7	0/1:13,0:12:32.47:42,0,32	0/0:19,0:11:7.78:0,8,42	0/0:31,0:26:57.06:0,57,2307	0/0:16,0:11:30.03:0,30,1181	0/0:37,0:32:66.12:0,66,3203	0/0:20,0:18:45.15:0,45,1950	1/1:24,0:15:5.53:349,6,0	0/1:10,0:9:2.04:156,0,2	1/1:7,0:3:9.02:129,9,0
chr10	86806840	.	GGAA	G	1185.55	PASS	AB=0.896;AC=12;AF=0.231;AN=52;BaseQRankSum=8.754;DP=587;FS=2.003;HRun=0;HaplotypeScore=110.4169;InbreedingCoeff=0.1635;MQ=39.88;MQ0=87;MQRankSum=-9.406;QD=5.84;ReadPosRankSum=-2.709;VQSLOD=1.9820;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:17:17.90:0,18,178	0/1:9,0:7:12.06:12,0,44	./.	./.	0/0:21,0:20:57.15:0,57,1074	0/0:22,0:17:32.71:0,33,686	0/0:36,0:26:61.67:0,62,1184	0/1:28,3:8:99:123,0,123	0/0:27,0:25:61.23:0,61,1367	0/1:36,0:22:79.63:95,0,80	0/0:9,0:5:2.88:0,3,16	0/0:19,0:13:27.09:0,27,615	0/0:24,0:20:21.18:0,21,772	0/0:27,0:21:47.50:0,48,894	0/0:27,0:21:54.05:0,54,1017	0/0:27,0:20:32.25:0,32,821	0/1:29,0:22:35.22:35,0,327	0/1:17,0:7:20.38:20,0,87	0/1:21,3:6:0.68:62,0,1	0/1:5,10:13:14.92:172,0,15	0/0:14,0:10:5.92:0,6,53	0/0:31,0:27:60.17:0,60,1232	0/0:14,0:11:27.09:0,27,559	0/0:38,0:33:72.48:0,72,1607	0/0:18,0:16:45.09:0,45,963	0/1:16,7:15:46.19:321,0,46	1/1:6,6:11:26.97:349,27,0	1/1:4,3:3:9.03:150,9,0
chr10	86806846	.	G	GGAA	967.97	PASS	AB=0.980;AC=12;AF=0.231;AN=52;BaseQRankSum=8.529;DP=583;FS=3.979;HRun=0;HaplotypeScore=111.4972;InbreedingCoeff=0.0583;MQ=41.26;MQ0=77;MQRankSum=-7.917;QD=5.41;ReadPosRankSum=-2.394;VQSLOD=2.0574;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:16:14.31:0,14,118	0/1:9,0:7:30.94:31,0,45	./.	./.	0/0:21,0:20:57.12:0,57,824	0/0:21,0:17:39.12:0,39,603	0/0:40,0:30:66.99:0,67,982	0/1:30,0:7:62.06:62,0,107	0/0:29,0:26:72.17:0,72,1151	0/1:32,1:19:18.84:519,0,19	1/1:5,1:4:5.95:46,6,0	0/0:19,0:14:36.10:0,36,552	0/0:28,0:24:53.94:0,54,757	0/0:27,0:22:51.04:0,51,747	0/0:28,0:22:57.12:0,57,881	0/0:28,0:21:37.87:0,38,711	0/1:22,2:20:99:182,0,290	0/0:14,0:6:8.21:0,8,105	0/1:24,0:7:18.97:29,0,19	0/1:15,0:13:55.02:65,0,55	0/0:15,0:10:2.95:0,3,31	0/0:33,0:29:63.12:0,63,970	0/0:14,0:12:30.02:0,30,452	0/0:36,0:31:80.29:0,80,1211	0/0:18,0:16:45.14:0,45,740	0/1:18,1:14:25.64:26,0,122	0/1:13,0:12:31.07:86,0,31	1/1:6,0:3:8.69:73,9,0
chr10	86806909	.	AGAGGAGGAGGAGGAGGAAGAAGAGGAAGAGGAGAAG	A	6382.01	PASS	AB=0.857;AC=21;AF=0.404;AN=52;BaseQRankSum=12.363;DP=538;FS=11.996;HRun=0;HaplotypeScore=408.2197;InbreedingCoeff=0.8339;MQ=47.87;MQ0=34;MQRankSum=-7.179;QD=44.01;ReadPosRankSum=-3.193;VQSLOD=1.6812;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:16.61:0,17,1105	1/1:4,0:3:6.02:183,6,0	0/0:13,0:2:6.02:0,6,175	./.	0/0:13,0:13:33.08:0,33,1506	0/0:22,0:20:54.19:0,54,2622	0/0:45,0:41:65.40:0,65,3635	1/1:15,0:5:7.03:186,7,0	0/0:28,0:28:72.25:0,72,3134	1/1:10,35:40:89.81:1900,90,0	1/1:4,9:10:12.04:223,12,0	0/0:29,0:28:78.27:0,78,4123	0/0:23,0:21:57.14:0,57,2754	0/0:28,0:26:66.23:0,66,2672	0/0:27,0:27:66.23:0,66,3668	0/0:22,0:23:63.21:0,63,2837	1/1:14,0:13:14.16:1001,14,0	./.	0/1:5,0:4:32.98:264,0,33	1/1:6,0:6:6.02:177,6,0	1/1:12,0:6:11.96:211,12,0	0/0:28,0:27:66.23:0,66,3685	0/0:15,0:15:42.14:0,42,2160	0/0:40,0:39:97.86:0,98,4892	0/0:18,0:18:50.82:0,51,2405	1/1:8,0:6:15.05:493,15,0	1/1:15,0:15:45.15:1430,45,0	1/1:6,0:6:10.28:314,10,0
chr10	86806969	.	AGAG	A	3815.70	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=8.303;DP=652;FS=9.118;HRun=0;HaplotypeScore=121.0715;InbreedingCoeff=0.9564;MQ=51.57;MQ0=32;MQRankSum=-6.755;QD=30.04;ReadPosRankSum=-1.160;VQSLOD=3.0323;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:69.13:0,69,1056	0/0:5,0:4:12.04:0,12,251	0/0:45,0:8:11.22:0,11,229	0/0:46,0:13:20.48:0,20,527	0/0:22,0:22:63.18:0,63,1202	0/0:21,0:21:51.13:0,51,983	0/0:43,0:39:87.28:0,87,1763	1/1:2,15:12:30.08:426,30,0	0/0:35,0:34:87.28:0,87,1727	0/0:32,0:31:62.88:0,63,1227	0/0:16,0:15:27.09:0,27,531	0/0:30,0:29:75.25:0,75,1527	0/0:28,0:28:72.25:0,72,1469	0/0:26,0:25:60.19:0,60,1211	0/0:29,0:29:63.22:0,63,1282	0/0:23,0:23:40.38:0,40,820	0/0:20,0:20:54.19:0,54,1129	0/0:4,0:4:2.90:0,3,16	1/1:5,12:13:33.05:444,33,0	1/1:7,3:8:21.06:296,21,0	1/1:6,5:9:18.06:258,18,0	1/1:11,15:25:45.15:672,45,0	0/0:22,0:22:59.87:0,60,1178	0/0:36,0:36:87.27:0,87,1760	0/0:13,0:13:30.10:0,30,627	1/1:2,18:19:57.15:825,57,0	1/1:1,17:17:39.13:582,39,0	1/1:2,6:8:21.07:313,21,0
chr10	86807200	.	G	GTT	1102.54	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.099;DP=636;FS=2.192;HRun=9;HaplotypeScore=78.7148;InbreedingCoeff=0.9593;MQ=80.25;MQ0=0;MQRankSum=-4.328;QD=28.27;ReadPosRankSum=-2.377;VQSLOD=3.4496;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,33:38:78.26:1197,78,0	0/0:6,0:6:12.03:0,12,127	0/0:18,0:18:45.04:0,45,453	0/0:17,0:18:39.30:0,39,353	0/0:24,0:24:57.07:0,57,601	0/0:19,0:20:45.05:0,45,526	0/0:34,0:34:96.19:0,96,1003	0/0:29,0:29:63.10:0,63,664	0/0:22,0:22:50.24:0,50,541	0/0:34,0:34:66.11:0,66,694	0/0:8,0:8:21.05:0,21,223	0/0:18,0:19:26.46:0,26,466	0/0:29,0:30:72.12:0,72,821	0/0:21,0:23:42.23:0,42,569	0/0:27,0:27:43.91:0,44,677	0/0:21,0:21:54.11:0,54,575	0/0:33,0:33:93.23:0,93,990	0/0:21,0:22:51.07:0,51,597	0/0:17,0:18:36.02:0,36,438	0/0:13,0:12:21.02:0,21,223	0/0:25,0:25:63.11:0,63,663	0/0:18,0:18:42.07:0,42,447	0/0:18,0:18:36.05:0,36,375	0/0:32,0:35:75.04:0,75,835	0/0:18,0:18:24.25:0,24,463	0/0:22,0:22:51.10:0,51,540	0/0:28,0:28:78.18:0,78,822	0/0:14,0:13:39.10:0,39,415
chr10	86808039	.	AC	A	1450.25	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.930;DP=620;FS=4.092;HRun=6;HaplotypeScore=72.6236;InbreedingCoeff=0.9409;MQ=80.27;MQ0=3;MQRankSum=-1.355;QD=23.77;ReadPosRankSum=3.284;VQSLOD=3.6334;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1319	1/1:0,3:3:6.02:64,6,0	0/0:36,0:28:33.54:0,34,489	0/0:33,2:25:24.98:0,25,273	0/0:19,0:19:57.17:0,57,728	0/0:23,0:23:60.19:0,60,788	0/0:43,0:43:99:0,123,1604	0/0:33,0:33:87.28:0,87,1142	0/0:24,0:24:69.22:0,69,907	1/1:1,19:20:54.12:573,54,0	1/1:0,13:13:33.08:354,33,0	0/0:25,0:25:75.24:0,75,985	0/0:17,0:17:45.12:0,45,573	0/0:13,0:13:39.13:0,39,513	0/0:25,0:25:72.23:0,72,947	0/0:18,0:18:54.18:0,54,710	1/1:3,22:25:57.14:612,57,0	0/0:26,0:26:72.22:0,72,930	0/0:21,0:21:57.14:0,57,714	0/0:14,0:14:39.11:0,39,493	0/0:28,0:28:78.24:0,78,1011	0/0:18,0:18:54.16:0,54,694	0/0:20,0:20:57.17:0,57,723	0/0:25,0:25:75.23:0,75,971	0/0:19,0:19:54.18:0,54,708	0/0:25,0:25:74.90:0,75,936	0/0:12,0:12:36.12:0,36,474	0/0:3,0:3:6:0,6,62
chr10	86808459	.	CGTGTGTGTGTGTGTGTGTGTGTGTGTGT	C	708.23	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.461;DP=510;FS=6.865;HRun=0;HaplotypeScore=316.2563;InbreedingCoeff=0.6729;MQ=70.28;MQ0=7;MQRankSum=-2.536;QD=19.14;ReadPosRankSum=-1.806;VQSLOD=0.4200;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,11:37:17.46:798,17,0	0/0:4,0:4:6.02:0,6,414	0/0:39,0:28:12.04:0,12,376	0/0:25,0:20:12.04:0,12,294	0/0:12,0:12:18.06:0,18,1521	0/0:24,0:24:27.09:0,27,2280	0/0:19,0:19:33.03:0,33,2074	0/0:21,0:21:24.08:0,24,1122	0/0:19,0:19:39.13:0,39,4283	0/0:16,0:16:30.10:0,30,2309	0/0:10,0:9:12.04:0,12,595	0/0:13,0:13:24.08:0,24,1878	0/0:13,0:13:39.13:0,39,3399	0/0:12,0:12:24.06:0,24,1553	0/0:8,0:8:15.05:0,15,1132	0/0:13,0:13:33.11:0,33,3206	0/0:32,0:31:75.21:0,75,7415	0/0:20,0:26:10.77:0,11,1106	0/0:19,0:19:18.06:0,18,1273	0/0:4,0:4:6.02:0,6,149	0/0:27,0:26:51.18:0,51,3246	0/0:11,0:11:21.05:0,21,1765	0/0:10,0:10:18.06:0,18,1250	0/0:40,0:41:78.74:0,79,7880	0/0:22,0:21:38.14:0,38,3270	0/0:19,0:18:42.14:0,42,2561	0/0:4,0:4:9.03:0,9,509	0/0:10,0:10:27.09:0,27,2092
chr10	86809982	.	C	CA	1249.61	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.719;DP=680;FS=7.942;HRun=3;HaplotypeScore=76.3978;InbreedingCoeff=0.9980;MQ=83.38;MQ0=0;MQRankSum=-3.366;QD=34.71;ReadPosRankSum=1.355;VQSLOD=4.1232;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:96.32:1344,96,0	0/0:11,0:11:33.10:0,33,396	0/0:27,0:27:56.84:0,57,737	0/0:25,0:24:43.79:0,44,563	0/0:17,0:17:51.14:0,51,600	0/0:18,0:18:54.15:0,54,637	0/0:32,0:32:90.25:0,90,1066	0/0:22,0:22:57.17:0,57,684	0/0:17,0:17:45.14:0,45,538	0/0:20,0:20:60.18:0,60,719	0/0:16,0:16:39.12:0,39,468	0/0:38,0:38:99:0,108,1295	0/0:34,0:34:99:0,99,1187	0/0:32,0:32:90.28:0,90,1080	0/0:27,0:27:69.19:0,69,814	0/0:24,0:24:72.21:0,72,853	0/0:29,0:29:87.19:0,87,1001	0/0:19,0:19:54.17:0,54,648	0/0:24,0:24:66.19:0,66,782	0/0:12,0:12:26.82:0,27,300	0/0:59,0:59:99:0,159,1907	0/0:28,0:28:78.15:0,78,916	0/0:14,0:14:30.09:0,30,360	0/0:21,0:21:51.15:0,51,612	0/0:17,0:17:45.12:0,45,529	0/0:24,0:24:69.20:0,69,815	0/0:23,0:23:63.19:0,63,756	0/0:14,0:14:42.13:0,42,504
chr10	86812114	.	CA	C	3001.64	PASS	AB=0.624;AC=30;AF=0.536;AN=56;BaseQRankSum=-7.279;DP=524;FS=4.228;HRun=14;HaplotypeScore=65.2575;InbreedingCoeff=0.3920;MQ=55.40;MQ0=22;MQRankSum=2.712;QD=7.68;ReadPosRankSum=6.432;VQSLOD=2.6250;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,17:24:42.73:279,43,0	0/1:3,7:9:3.39:102,0,3	0/0:14,0:4:11.97:0,12,99	0/0:11,0:6:2.69:0,3,9	1/1:7,14:22:6.86:183,7,0	1/1:2,9:11:17.84:123,18,0	1/1:4,17:22:5.52:183,6,0	0/0:7,0:21:41.66:0,42,218	1/1:4,10:16:0.07:128,0,0	1/1:7,20:28:47.10:303,47,0	1/1:2,7:8:11.87:82,12,0	0/1:4,11:16:10.50:71,0,11	1/1:2,13:15:17.68:123,18,0	0/1:7,9:16:10.08:72,0,10	0/1:6,13:16:0.06:119,0,0	1/1:7,12:19:26.66:185,27,0	0/1:7,42:50:20.89:435,0,21	0/1:9,13:26:64.45:143,0,64	0/0:7,0:10:15.35:0,15,86	0/0:8,0:19:38.65:0,39,207	0/0:3,0:13:26.71:0,27,140	0/1:5,4:9:18.94:32,0,19	1/1:3,11:17:24.95:169,25,0	1/1:9,25:36:51.42:415,51,0	0/1:12,5:16:46.26:46,0,187	0/0:6,0:14:31.57:0,32,171	0/0:6,0:13:20.91:0,21,108	0/0:5,0:6:14.46:0,14,83
chr10	86812321	.	C	CGATGATCCAG	1405.73	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.046;DP=552;FS=8.489;HRun=0;HaplotypeScore=156.6974;InbreedingCoeff=0.9773;MQ=67.08;MQ0=0;MQRankSum=-5.798;QD=73.99;ReadPosRankSum=-0.238;VQSLOD=2.7802;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,8:19:36.08:1500,36,0	0/0:5,0:5:15.05:0,15,472	0/0:20,0:20:54.18:0,54,1426	0/0:20,0:19:51.15:0,51,1435	0/0:11,0:11:30.10:0,30,945	0/0:22,0:22:63.22:0,63,1934	0/0:31,0:31:78.27:0,78,2252	0/0:18,0:17:39.13:0,39,1226	0/0:26,0:26:78.25:0,78,2388	0/0:21,0:21:54.18:0,54,1581	0/0:8,0:8:24.08:0,24,756	0/0:23,0:23:54.19:0,54,1620	0/0:19,0:19:48.16:0,48,1511	0/0:22,0:22:63.22:0,63,1897	0/0:21,0:21:57.20:0,57,1748	0/0:20,0:20:51.18:0,51,1607	0/0:34,0:34:90.26:0,90,2517	0/0:32,0:32:84.29:0,84,2562	0/0:19,0:19:51.16:0,51,1311	0/0:14,0:14:39.13:0,39,1177	0/0:35,0:35:87.30:0,87,2667	0/0:15,0:15:45.15:0,45,1407	0/0:13,0:13:36.12:0,36,1133	0/0:27,0:27:60.19:0,60,1770	0/0:13,0:13:30.10:0,30,945	0/0:17,0:17:45.15:0,45,1371	0/0:20,0:20:51.18:0,51,1531	0/0:7,0:7:21.07:0,21,662
chr10	86815403	.	GGAGA	G	940.40	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.680;DP=331;FS=6.355;HRun=0;HaplotypeScore=58.6936;InbreedingCoeff=0.7654;MQ=84.01;MQ0=0;MQRankSum=-4.164;QD=34.83;ReadPosRankSum=1.658;VQSLOD=2.8048;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.15:0,45,1194	1/1:0,2:2:6.02:114,6,0	0/0:16,0:16:39.13:0,39,803	0/0:13,0:13:36.02:0,36,803	0/0:6,0:6:9.03:0,9,242	0/0:3,0:3:9.03:0,9,242	0/0:30,0:30:87.30:0,87,2284	0/0:7,0:7:21.06:0,21,510	0/0:4,0:4:6.02:0,6,161	1/1:2,2:4:6.49:114,6,0	1/1:0,2:2:6.02:114,6,0	0/0:7,0:7:18.06:0,18,472	0/0:4,0:4:12.04:0,12,323	0/0:12,0:12:33.11:0,33,887	0/0:5,0:5:15.05:0,15,391	0/0:1,0:1:3.01:0,3,81	1/1:5,14:19:39.13:737,39,0	0/0:36,0:36:93.28:0,93,2442	0/0:15,0:15:42.14:0,42,1049	0/0:3,0:3:9.03:0,9,240	0/0:45,0:45:99:0,129,3390	0/0:6,0:6:18.06:0,18,433	0/0:4,0:4:9.03:0,9,242	0/0:29,0:29:87.30:0,87,2309	0/0:11,0:11:30.10:0,30,776	0/0:14,0:14:39.13:0,39,977	0/0:9,0:9:27.09:0,27,700	0/0:8,0:8:24.08:0,24,645
chr10	86816824	.	TTGTG	T	7386.35	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.024;DP=676;FS=8.370;HRun=0;HaplotypeScore=115.2852;InbreedingCoeff=0.9952;MQ=67.32;MQ0=4;MQRankSum=-3.087;QD=31.17;ReadPosRankSum=2.529;VQSLOD=4.6197;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,20:25:51.13:825,51,0	0/0:7,0:7:18.02:0,18,344	0/0:33,0:21:35.99:0,36,700	0/0:33,0:23:36.98:0,37,626	0/0:10,0:10:21.07:0,21,497	0/0:14,0:14:30.09:0,30,689	0/0:35,0:35:75.26:0,75,1808	1/1:11,23:34:32.32:833,32,0	0/0:34,0:35:96.04:0,96,2217	0/0:25,0:26:57.12:0,57,1143	0/0:16,0:16:36.09:0,36,746	0/0:29,0:29:68.94:0,69,1536	0/0:26,0:27:78:0,78,1813	0/0:33,0:33:71.94:0,72,1645	0/0:23,0:23:66.20:0,66,1509	0/0:19,0:19:51.15:0,51,1169	0/0:33,0:33:78.18:0,78,1728	1/1:3,23:26:60.19:1007,60,0	1/1:9,17:25:48.07:743,48,0	1/1:5,12:17:39.09:624,39,0	1/1:13,44:57:99:1657,108,0	0/0:17,0:17:36.11:0,36,841	0/0:9,0:9:18.04:0,18,392	0/0:27,0:27:63.17:0,63,1421	0/0:11,0:13:27.03:0,27,538	1/1:7,20:27:60.09:867,60,0	1/1:4,12:17:35.94:551,36,0	1/1:2,5:8:18.05:280,18,0
chr10	86817447	.	GA	G	6366.55	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=11.573;DP=528;FS=4.836;HRun=7;HaplotypeScore=56.1190;InbreedingCoeff=0.9893;MQ=75.75;MQ0=0;MQRankSum=-0.922;QD=25.16;ReadPosRankSum=0.382;VQSLOD=5.2456;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,34:39:90.20:918,90,0	1/1:1,5:6:9.02:92,9,0	0/0:19,0:19:45.20:0,45,531	0/0:22,0:23:16.12:0,16,410	0/0:18,0:18:42.13:0,42,523	0/0:21,0:21:60.19:0,60,755	0/0:21,0:21:54.13:0,54,650	1/1:1,26:27:75.15:753,75,0	0/0:22,0:22:60.19:0,60,755	1/1:2,13:15:39.09:398,39,0	1/1:1,7:8:21.05:213,21,0	0/0:18,0:18:45.14:0,45,562	0/0:20,0:20:57.17:0,57,705	0/0:18,0:18:45.14:0,45,566	0/0:18,0:18:48.15:0,48,599	0/0:20,0:20:57.18:0,57,717	1/1:2,21:23:57.13:582,57,0	1/1:3,16:19:30.06:306,30,0	1/1:1,22:23:66.12:660,66,0	1/1:2,13:15:39.09:398,39,0	1/1:0,12:12:30.07:306,30,0	0/0:14,0:14:39.12:0,39,486	0/0:17,0:17:48.15:0,48,603	0/0:13,0:13:39.11:0,39,478	0/0:12,0:12:31.33:0,31,369	1/1:2,29:31:84.17:855,84,0	1/1:2,22:24:60.13:611,60,0	1/1:0,11:11:27.06:274,27,0
chr10	86818104	.	TAA	T	5568.66	PASS	AB=0.941;AC=19;AF=0.339;AN=56;BaseQRankSum=11.576;DP=422;FS=1.817;HRun=4;HaplotypeScore=52.6674;InbreedingCoeff=0.9048;MQ=60.34;MQ0=3;MQRankSum=-2.189;QD=29.62;ReadPosRankSum=0.873;VQSLOD=3.5960;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:60.20:881,60,0	0/0:6,0:6:18.05:0,18,308	0/1:15,1:10:13.43:13,0,161	0/0:8,0:8:21.06:0,21,362	0/0:22,0:22:54.18:0,54,981	0/0:6,0:6:15.04:0,15,238	0/0:9,0:9:27.03:0,27,396	1/1:3,31:33:84.19:1104,84,0	0/0:10,0:10:24.06:0,24,378	0/0:24,0:24:66.21:0,66,1125	0/0:15,0:15:45.15:0,45,811	0/0:14,0:14:39.13:0,39,730	0/0:12,0:12:27.05:0,27,441	0/0:8,0:8:21.04:0,21,356	0/0:21,0:21:42.07:0,42,659	0/0:13,0:13:21.31:0,21,575	0/0:24,0:24:66.16:0,66,1109	1/1:0,15:15:39.13:573,39,0	1/1:1,14:15:39.04:488,39,0	1/1:1,15:16:33.04:459,33,0	1/1:0,10:10:21.07:309,21,0	0/0:5,0:5:9.02:0,9,140	0/0:7,0:7:18.06:0,18,337	0/0:14,0:14:42.13:0,42,756	0/0:16,0:16:48.16:0,48,870	1/1:2,20:22:57.18:817,57,0	1/1:2,25:27:47.69:703,48,0	1/1:0,5:5:15.05:220,15,0
chr10	86818395	.	TA	T	2641.75	PASS	AB=0.909;AC=18;AF=0.321;AN=56;BaseQRankSum=7.083;DP=483;FS=16.886;HRun=11;HaplotypeScore=51.9804;InbreedingCoeff=0.8312;MQ=56.68;MQ0=7;MQRankSum=-1.233;QD=15.18;ReadPosRankSum=-2.053;VQSLOD=1.9240;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:96.17:0,96,994	0/0:7,0:7:15.04:0,15,160	0/0:12,0:8:1.41:0,1,162	0/0:8,0:3:6:0,6,54	0/0:16,0:16:36.09:0,36,384	0/0:21,0:21:52.37:0,52,547	0/0:16,0:16:39.10:0,39,416	1/1:5,17:22:50.86:408,51,0	0/1:11,1:13:0.75:1,0,182	0/0:25,0:25:66.17:0,66,704	0/0:14,1:15:14.45:0,14,359	0/0:19,1:19:29.49:0,29,519	0/0:17,0:17:42.11:0,42,448	0/0:12,0:12:33.08:0,33,351	0/0:15,0:14:36.08:0,36,376	0/0:13,0:15:29.91:0,30,302	0/0:27,0:26:51.13:0,51,544	1/1:5,16:21:38.95:320,39,0	1/1:7,22:26:65.90:541,66,0	1/1:0,13:13:35.96:296,36,0	1/1:2,12:14:38.55:305,39,0	0/0:11,0:11:21.03:0,21,211	0/1:7,1:8:6.59:7,0,142	0/0:11,0:11:23.73:0,24,234	0/0:20,0:20:48.10:0,48,503	1/1:4,15:17:38.94:320,39,0	1/1:7,17:23:49.96:400,50,0	1/1:0,10:10:29.97:246,30,0
chr10	86818526	.	T	TCCA	8901.45	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=1.188;DP=537;FS=14.061;HRun=0;HaplotypeScore=82.8332;InbreedingCoeff=0.9967;MQ=64.72;MQ0=1;MQRankSum=-7.491;QD=46.60;ReadPosRankSum=0.451;VQSLOD=5.9195;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,41:44:99:2259,102,0	0/0:10,0:10:30.10:0,30,489	0/0:12,0:11:27.08:0,27,407	0/0:17,0:17:45.08:0,45,657	0/0:23,0:23:66.23:0,66,1076	0/0:15,0:15:42.14:0,42,684	0/0:23,0:23:63.19:0,63,975	1/1:3,23:26:69.20:1351,69,0	0/0:14,0:14:36.11:0,36,559	0/0:20,0:20:57.17:0,57,904	0/0:18,0:18:51.17:0,51,829	0/0:16,0:16:41.97:0,42,684	0/0:16,0:16:39.13:0,39,636	0/0:15,0:15:39.13:0,39,636	0/0:11,0:11:30.07:0,30,440	0/0:14,0:14:39.13:0,39,636	0/0:30,0:30:66.21:0,66,1046	1/1:1,10:11:24.08:536,24,0	1/1:2,14:14:42.09:888,42,0	1/1:7,18:25:45.15:992,45,0	1/1:2,18:20:28.65:606,29,0	0/0:19,0:19:45.06:0,45,674	0/0:21,0:21:60.18:0,60,963	0/0:30,0:30:84.17:0,84,1254	0/0:22,0:21:54.18:0,54,881	1/1:1,20:19:51.17:1095,51,0	1/1:1,18:16:39.13:869,39,0	1/1:1,4:7:15.05:305,15,0
chr10	86818589	.	ATGTG	A	678.85	PASS	AB=1.000;AC=13;AF=0.250;AN=52;BaseQRankSum=3.708;DP=596;FS=4.485;HRun=0;HaplotypeScore=118.6092;InbreedingCoeff=0.7097;MQ=60.49;MQ0=11;MQRankSum=-0.729;QD=4.88;ReadPosRankSum=1.330;VQSLOD=2.3375;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:26:6.01:56,6,0	1/1:7,2:9:3.01:47,3,0	0/0:35,0:22:0:0,0,0	./.	0/0:23,0:23:18.03:0,18,296	0/0:16,0:16:26.83:0,27,456	0/0:16,0:18:20.78:0,21,289	./.	0/0:12,0:12:15.01:0,15,340	1/1:14,2:15:3.01:46,3,0	1/1:17,0:17:2.99:25,3,0	0/0:28,0:30:50.90:0,51,1020	0/0:10,0:11:8.76:0,9,124	0/0:20,0:19:21.07:0,21,456	0/0:17,0:19:23.54:0,24,368	0/0:17,0:18:20.81:0,21,424	1/1:21,17:39:26.56:542,27,0	1/1:11,0:14:11.56:111,12,0	0/0:23,0:22:12.04:0,12,222	0/0:24,0:24:16.61:0,17,291	0/0:34,0:33:48.62:0,49,949	0/1:17,0:17:6.90:7,0,294	0/0:20,0:18:18.05:0,18,321	0/0:32,0:32:34.63:0,35,660	0/0:20,0:19:18.06:0,18,383	0/0:22,0:22:21.06:0,21,391	0/0:21,0:21:33.10:0,33,612	0/0:11,0:10:12.04:0,12,219
chr10	86820099	.	CAA	C	2991.03	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-0.102;DP=515;FS=5.097;HRun=12;HaplotypeScore=68.8675;InbreedingCoeff=0.9243;MQ=64.52;MQ0=19;MQRankSum=0.205;QD=18.13;ReadPosRankSum=-0.250;VQSLOD=2.7191;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:35:62.38:0,62,219	0/0:1,0:11:22.46:0,22,79	0/1:25,0:8:2.82:3,0,202	0/0:14,0:5:8.87:0,9,87	0/0:20,0:21:50.65:0,51,689	0/0:15,0:15:39.13:0,39,581	0/0:19,1:20:23.15:0,23,695	1/1:6,12:17:33.03:336,33,0	0/0:23,0:23:50.98:0,51,699	0/0:4,1:24:20.70:0,21,155	0/0:5,0:19:37.94:0,38,168	0/0:16,0:14:30.10:0,30,445	0/0:14,0:14:27.09:0,27,396	0/0:13,0:14:30.03:0,30,371	0/0:19,0:19:42.14:0,42,625	0/0:5,0:6:12.03:0,12,163	0/0:4,0:29:29.07:0,29,151	1/1:4,14:17:35.64:366,36,0	1/1:6,13:17:35.22:325,35,0	1/1:2,15:15:39.04:386,39,0	1/1:1,15:16:42.08:427,42,0	0/0:11,0:10:27.09:0,27,393	0/0:13,0:14:26.53:0,27,342	0/0:27,0:27:75.25:0,75,1116	0/0:14,0:14:39.11:0,39,560	1/1:1,18:20:56.87:561,57,0	1/1:2,21:23:63.14:641,63,0	1/1:2,5:5:15.03:152,15,0
chr10	86824580	.	CGAACACCAGGAGAGTGTGAGCCAAT	C	142.73	PASS	AB=1.000;AC=7;AF=0.70;AN=10;BaseQRankSum=2.588;DP=182;FS=0.000;HRun=0;HaplotypeScore=51.6018;MQ=20.22;MQ0=79;MQRankSum=-1.813;QD=4.46;ReadPosRankSum=2.426;VQSLOD=0.9332;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:14,0:5:15.05:0,15,312	./.	./.	./.	./.	./.	1/1:7,3:10:4.26:80,4,0	./.	./.	./.	./.	./.	./.	./.	1/1:8,0:2:3.01:45,3,0	./.	./.	./.	./.	./.	./.	./.	1/1:5,3:5:8.82:95,9,0	0/1:6,0:4:0:0,0,0	./.
chr10	86825712	.	GGAGAGTGTGAGTCAATGAATATCAT	G	1405.82	PASS	AB=0.940;AC=10;AF=0.185;AN=54;BaseQRankSum=11.303;DP=872;FS=13.546;HRun=0;HaplotypeScore=423.9310;InbreedingCoeff=0.1654;MQ=48.53;MQ0=73;MQRankSum=-7.142;QD=7.94;ReadPosRankSum=0.989;VQSLOD=0.6904;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:47:53.90:0,54,1204	0/0:16,0:16:42.14:0,42,1610	./.	0/0:55,0:2:2.04:0,2,6	0/0:36,0:35:90.10:0,90,2528	0/0:21,0:21:57.09:0,57,1616	0/0:40,0:40:99:0,99,2791	0/1:16,20:28:12.88:792,0,13	0/0:39,0:37:96.78:0,97,3688	0/0:35,0:34:87.28:0,87,3217	0/0:19,0:18:35.97:0,36,874	0/0:33,0:33:84.69:0,85,3097	0/0:29,0:28:66.16:0,66,2234	0/0:34,0:34:78.25:0,78,3018	0/0:46,0:46:99:0,126,4468	0/0:36,0:36:96.19:0,96,3466	0/0:38,0:37:81.22:0,81,3102	0/1:11,0:10:15.22:64,0,15	1/1:15,0:9:2.14:31,2,0	0/1:24,0:20:10.94:236,0,11	0/1:24,0:18:29.59:30,0,55	0/0:27,0:27:60.01:0,60,1677	0/0:17,0:17:42.09:0,42,1423	0/0:45,0:45:99:0,108,4066	0/0:25,0:25:63.16:0,63,2420	0/1:26,0:23:99:232,0,149	0/1:27,0:21:38.04:38,0,54	1/1:14,0:10:4.10:122,4,0
chr10	86825724	.	TCAATGAATATCATGAGAGTGTGAGC	T	2391.76	PASS	AB=0.600;AC=15;AF=0.268;AN=56;BaseQRankSum=11.152;DP=902;FS=15.727;HRun=0;HaplotypeScore=411.0977;InbreedingCoeff=0.8286;MQ=47.58;MQ0=98;MQRankSum=-8.401;QD=14.58;ReadPosRankSum=1.490;VQSLOD=0.3912;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:46:8.38:0,8,895	0/0:17,0:17:51.17:0,51,1577	0/0:67,0:3:9.01:0,9,119	0/0:64,0:2:3:0,3,27	0/0:37,0:36:90.31:0,90,2503	0/0:21,0:21:45.15:0,45,1382	0/0:43,0:43:99:0,102,2977	1/1:31,0:24:53.49:592,53,0	0/0:40,0:38:99:0,99,3322	0/0:39,0:37:99:0,105,3435	0/0:18,0:17:30.10:0,30,791	0/0:35,0:34:87.30:0,87,2725	0/0:31,0:30:72.24:0,72,2270	0/0:31,0:31:84.29:0,84,2793	0/0:52,0:52:99:0,144,4835	0/0:41,0:40:99:0,108,3534	0/0:40,0:39:96.31:0,96,3194	1/1:10,0:7:14.80:176,15,0	1/1:14,0:9:23.89:227,24,0	1/1:22,0:17:35.87:512,36,0	1/1:24,0:12:4.08:129,4,0	0/0:28,0:27:63.18:0,63,1743	0/0:17,0:17:45.15:0,45,1317	0/0:44,0:43:99:0,108,3738	0/0:23,0:23:66.23:0,66,2199	0/1:7,14:17:42.04:454,0,42	1/1:26,0:17:21.63:206,22,0	1/1:16,0:8:23.65:288,24,0
chr10	86828093	.	TGAACATCATGAGAGTGTGAGCCAAC	T	502.27	PASS	AB=0.935;AC=10;AF=0.179;AN=56;BaseQRankSum=6.696;DP=1009;FS=2.811;HRun=0;HaplotypeScore=377.9964;InbreedingCoeff=0.3489;MQ=46.41;MQ0=147;MQRankSum=-3.895;QD=2.03;ReadPosRankSum=-0.448;VQSLOD=1.2505;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:49:83.92:0,84,1497	0/0:22,0:22:44.92:0,45,855	0/1:43,0:6:14.16:14,0,20	0/1:64,0:9:15.32:15,0,78	0/0:36,0:29:44.93:0,45,840	0/0:26,0:24:38.75:0,39,702	0/0:31,0:25:30.07:0,30,582	0/0:46,0:2:2.94:0,3,18	0/0:39,0:38:77.84:0,78,1557	0/0:51,0:42:87.24:0,87,2022	0/0:28,0:23:26.87:0,27,480	0/0:49,0:49:92.52:0,93,1697	0/0:37,0:37:65.82:0,66,1362	0/0:36,0:36:56.60:0,57,936	0/0:60,0:56:98.71:0,99,2003	0/0:52,0:50:65.97:0,66,1185	0/0:22,0:22:32.85:0,33,597	0/0:24,0:22:39.03:0,39,774	1/1:22,0:7:2.99:24,3,0	0/1:17,0:10:11.91:63,0,12	1/1:62,0:43:3.24:118,3,0	0/0:39,0:38:68.79:0,69,1245	0/0:26,0:24:36.01:0,36,669	0/0:37,0:37:68.87:0,69,1429	0/0:27,0:26:38.96:0,39,685	0/1:20,11:19:40.02:296,0,40	0/0:20,0:8:7.92:0,8,42	1/1:9,0:5:6.02:112,6,0
chr10	86828950	.	AT	A	336.95	PASS	AB=0.811;AC=8;AF=0.235;AN=34;BaseQRankSum=-0.713;DP=271;FS=6.838;HRun=1;HaplotypeScore=22.7229;InbreedingCoeff=-0.2183;MQ=37.72;MQ0=67;MQRankSum=-0.351;QD=5.81;ReadPosRankSum=2.049;VQSLOD=0.6595;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:1:3:0,3,27	./.	0/0:58,0:5:11.98:0,12,143	0/0:49,0:5:15.05:0,15,239	0/1:5,1:4:38.71:53,0,39	0/0:6,0:2:6.02:0,6,96	0/1:2,1:3:32.83:33,0,62	./.	0/0:8,0:3:6.02:0,6,96	0/1:12,6:11:99:179,0,196	0/1:12,2:6:68.66:69,0,100	0/0:6,1:3:3.01:0,3,48	0/0:7,0:2:3.90:0,4,50	0/0:8,1:3:9.03:0,9,143	./.	0/0:11,2:5:3:0,3,48	0/0:2,0:1:3:0,3,27	./.	./.	./.	./.	1/1:3,5:2:3.01:42,3,0	0/1:4,1:3:22.52:35,0,23	./.	./.	0/1:3,1:2:32.31:36,0,32	./.	./.
chr10	86833796	.	C	CAT	1011	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.990;DP=496;FS=0.778;HRun=0;HaplotypeScore=67.0750;InbreedingCoeff=0.9498;MQ=71.21;MQ0=0;MQRankSum=-1.789;QD=21.98;ReadPosRankSum=2.196;VQSLOD=3.8443;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,25:32:60.21:997,60,0	0/0:7,0:7:18.04:0,18,213	0/0:7,0:9:11.99:0,12,131	0/0:12,0:12:13.58:0,14,141	0/0:35,0:35:96.30:0,96,1200	0/0:16,0:16:45.14:0,45,567	0/0:28,0:28:72.22:0,72,895	0/0:15,0:16:44.88:0,45,541	0/0:20,0:20:60.19:0,60,757	0/0:23,0:23:54.17:0,54,681	0/0:21,0:22:53.99:0,54,644	0/0:18,0:18:45.14:0,45,567	0/0:10,0:11:32.94:0,33,392	0/0:13,0:13:30.10:0,30,378	0/0:18,0:18:54.15:0,54,666	0/0:16,0:16:36.11:0,36,454	0/0:26,0:26:54.17:0,54,681	1/1:5,0:14:15.01:133,15,0	0/0:11,0:11:30.09:0,30,366	0/0:19,0:19:36.11:0,36,451	0/0:30,0:30:75.21:0,75,918	0/0:7,0:7:15.05:0,15,189	0/0:12,0:12:36.12:0,36,454	0/0:12,0:12:27.07:0,27,327	0/0:10,0:10:21.05:0,21,252	0/0:22,0:22:57.15:0,57,692	0/0:24,0:24:66.21:0,66,832	0/0:13,0:12:30.10:0,30,378
chr10	86834139	.	C	CT	635.38	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=3.426;DP=404;FS=2.918;HRun=7;HaplotypeScore=60.5110;InbreedingCoeff=0.6906;MQ=60.57;MQ0=10;MQRankSum=0.846;QD=16.29;ReadPosRankSum=0.156;VQSLOD=3.5244;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,12:15:30.99:395,31,0	0/0:8,0:8:24.04:0,24,231	0/0:45,0:15:27.09:0,27,232	0/0:38,0:14:15.32:0,15,129	0/0:23,0:22:39.83:0,40,388	0/0:9,0:9:12.07:0,12,86	0/0:13,0:12:15.68:0,16,248	0/0:33,0:33:48.88:0,49,558	0/0:1,0:1:3:0,3,29	0/0:13,0:13:39.06:0,39,376	0/0:17,0:17:36.04:0,36,347	0/0:8,0:7:15.02:0,15,144	0/0:3,0:3:6:0,6,57	0/0:3,0:3:5.68:0,6,40	0/0:8,0:8:14.76:0,15,128	0/0:8,0:8:15.02:0,15,145	0/0:18,0:15:39.05:0,39,372	1/1:6,13:18:30.09:360,30,0	0/0:23,0:21:57.07:0,57,548	0/0:8,0:8:19.55:0,20,178	0/0:10,0:9:21.03:0,21,203	0/0:3,0:3:3:0,3,29	0/1:3,0:2:0:0,0,0	0/0:6,0:5:9.01:0,9,87	0/0:15,0:13:33.04:0,33,318	0/0:17,0:17:39.93:0,40,378	0/0:16,0:15:36.96:0,37,316	0/0:16,0:13:33.05:0,33,319
chr10	86834267	.	CT	C	279.47	PASS	AB=0.900;AC=9;AF=0.173;AN=52;BaseQRankSum=2.711;DP=317;FS=1.819;HRun=14;HaplotypeScore=37.2435;InbreedingCoeff=0.6249;MQ=45.95;MQ0=26;MQRankSum=1.249;QD=4.17;ReadPosRankSum=0.263;VQSLOD=-0.1956;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:19:38.92:0,39,338	1/1:0,4:3:5.91:41,6,0	./.	0/0:9,0:1:0:0,0,0	0/0:16,1:15:22.08:0,22,175	0/0:16,0:16:27.15:0,27,255	0/0:9,1:8:6.48:0,6,57	0/0:26,0:17:23.93:0,24,205	0/0:2,0:2:3:0,3,28	1/1:7,7:9:14.83:103,15,0	1/1:3,14:15:14.76:103,15,0	0/0:8,0:6:9.01:0,9,84	0/0:2,0:3:2.84:0,3,14	0/0:9,0:8:5.99:0,6,51	0/0:6,0:6:11.89:0,12,92	0/0:11,0:12:29.80:0,30,249	1/1:6,16:19:27.07:174,27,0	0/0:19,0:18:38.99:0,39,349	0/0:13,0:10:16.97:0,17,151	0/0:10,0:11:8.86:0,9,63	0/0:4,0:4:2.99:0,3,23	./.	0/0:3,0:4:5.84:0,6,42	0/0:7,0:6:6:0,6,54	0/1:8,1:9:2.56:3,0,113	0/0:18,0:18:39.41:0,39,342	0/0:10,0:10:20.86:0,21,168	0/0:16,0:14:33.04:0,33,306
chr10	86834456	.	C	CCCAT	1922.39	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.672;DP=566;FS=0.755;HRun=0;HaplotypeScore=98.2328;InbreedingCoeff=0.9469;MQ=70.42;MQ0=3;MQRankSum=-2.076;QD=42.72;ReadPosRankSum=-0.067;VQSLOD=3.3747;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,36:44:78.26:2017,78,0	0/0:9,0:9:15.05:0,15,280	0/0:21,0:20:60.19:0,60,1037	0/0:19,0:17:45.14:0,45,780	0/0:21,0:21:41.68:0,42,783	0/0:19,0:18:51.17:0,51,952	0/0:31,0:31:81.26:0,81,1473	0/0:34,0:34:87.28:0,87,1567	0/0:13,0:13:33.11:0,33,609	0/0:14,0:14:36.12:0,36,646	0/0:14,0:14:38.91:0,39,727	0/0:20,0:20:57.20:0,57,1064	0/0:16,0:16:45.15:0,45,830	0/0:16,0:14:42.14:0,42,778	0/0:19,0:19:54.19:0,54,1008	0/0:15,0:15:45.15:0,45,838	0/0:42,0:42:99:0,114,2089	0/0:28,0:28:79.12:0,79,1404	0/0:23,0:21:57.17:0,57,1021	0/0:9,0:9:21.07:0,21,392	0/0:42,0:41:99:0,111,2059	0/0:5,0:5:15.05:0,15,280	0/0:8,0:8:21.07:0,21,392	0/0:25,0:25:69.24:0,69,1279	0/0:14,0:14:42.14:0,42,783	0/0:22,0:22:60.21:0,60,1108	0/0:17,0:17:44.93:0,45,806	0/0:5,0:5:15.05:0,15,280
chr10	86835323	.	TAC	T	674.99	PASS	AB=0.812;AC=15;AF=0.288;AN=52;BaseQRankSum=4.255;DP=653;FS=2.203;HRun=0;HaplotypeScore=96.5101;InbreedingCoeff=0.3804;MQ=54.28;MQ0=38;MQRankSum=-0.171;QD=2.76;ReadPosRankSum=-0.089;VQSLOD=2.2209;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:2.60:0,3,26	0/0:5,0:10:9:0,9,91	./.	./.	0/0:16,0:16:19.18:0,19,237	0/0:11,0:11:15.15:0,15,268	0/1:19,3:23:9.57:10,0,269	1/1:29,0:27:13.52:128,14,0	0/0:28,0:28:38.44:0,38,496	0/0:22,0:23:28.55:0,29,222	0/0:13,0:20:8.95:0,9,77	0/0:30,0:30:21.09:0,21,560	0/0:26,0:26:24.30:0,24,270	0/0:18,1:19:2.17:0,2,380	0/1:20,0:20:36.42:36,0,242	0/0:16,0:16:18.04:0,18,238	0/0:18,0:35:22.33:0,22,220	0/0:9,0:9:6.01:0,6,69	1/1:20,4:22:18.71:169,19,0	0/1:5,8:14:31.95:89,0,32	0/1:24,28:51:56.96:190,0,57	0/0:27,0:27:35.97:0,36,488	0/0:13,0:13:12.51:0,13,179	0/0:35,0:35:31.23:0,31,841	0/1:20,1:21:12.99:13,0,205	1/1:17,0:29:29.44:129,29,0	1/1:8,14:22:5.68:67,6,0	1/1:9,0:9:2.98:8,3,0
chr10	86836827	.	T	TCC	1063.79	PASS	AB=0.806;AC=12;AF=0.214;AN=56;BaseQRankSum=0.417;DP=570;FS=5.340;HRun=9;HaplotypeScore=80.6125;InbreedingCoeff=0.8106;MQ=82.23;MQ0=1;MQRankSum=-2.756;QD=8.51;ReadPosRankSum=-1.957;VQSLOD=0.3046;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,12:17:14.98:230,15,0	1/1:4,0:4:2.69:46,3,0	0/1:32,0:24:18.03:18,0,333	0/0:24,0:23:33.10:0,33,314	0/0:16,0:16:32.97:0,33,317	0/0:20,0:20:45.08:0,45,470	0/0:21,0:21:54.07:0,54,556	0/0:25,0:28:36.03:0,36,495	0/0:24,0:24:63.06:0,63,638	1/1:4,9:13:18.06:258,18,0	0/1:4,5:11:0.03:0,0,0	0/0:27,0:27:66.14:0,66,694	0/0:14,0:14:36.09:0,36,383	0/0:18,0:18:40.67:0,41,464	0/0:21,0:22:56.88:0,57,587	0/0:24,0:24:63.14:0,63,670	1/1:5,13:20:35.61:517,36,0	1/1:5,0:28:47.41:163,47,0	0/0:22,0:23:25.17:0,25,286	0/0:19,0:19:46.30:0,46,473	0/0:27,0:27:46.25:0,46,637	0/0:15,0:15:40.22:0,40,387	0/0:17,0:17:41.70:0,42,412	0/0:26,0:26:72.05:0,72,732	0/0:16,0:16:39.07:0,39,405	0/0:25,1:26:22.97:0,23,654	0/0:21,0:21:60.15:0,60,638	0/0:16,0:16:39.04:0,39,397
chr10	86838365	.	T	TG	4624.49	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-6.953;DP=464;FS=3.527;HRun=6;HaplotypeScore=57.6473;InbreedingCoeff=0.9892;MQ=84.35;MQ0=1;MQRankSum=-2.572;QD=29.27;ReadPosRankSum=-1.321;VQSLOD=5.0565;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:51.12:624,51,0	0/0:6,0:6:15.02:0,15,146	0/0:31,0:22:27.32:0,27,409	0/0:48,0:34:80.95:0,81,759	0/0:16,0:16:45.08:0,45,450	0/0:12,0:12:36.08:0,36,367	0/0:14,0:14:33.06:0,33,331	1/1:6,25:31:72.17:862,72,0	0/0:6,0:6:18.04:0,18,184	0/0:18,0:18:54.12:0,54,547	0/0:6,0:6:15.03:0,15,150	0/0:14,0:14:36.06:0,36,360	0/0:8,0:8:18.04:0,18,184	0/0:12,0:12:27.04:0,27,268	0/0:16,0:16:39.08:0,39,397	0/0:9,0:9:24.04:0,24,238	0/0:17,0:17:51.08:0,51,509	0/0:16,0:16:39.06:0,39,389	1/1:1,8:9:24.04:285,24,0	1/1:0,11:11:30.05:359,30,0	1/1:1,32:33:75.24:943,75,0	0/0:9,0:9:21.03:0,21,202	0/0:12,0:12:33.06:0,33,330	0/0:18,0:18:51.12:0,51,520	0/0:15,0:15:39.08:0,39,397	1/1:1,18:19:20.55:573,21,0	1/1:2,16:18:42.07:526,42,0	1/1:1,13:14:36.12:452,36,0
chr10	86839298	.	GA	G	1358.10	PASS	AB=0.598;AC=8;AF=0.143;AN=56;BaseQRankSum=7.130;DP=560;FS=4.105;HRun=12;HaplotypeScore=60.8620;InbreedingCoeff=0.6767;MQ=59.93;MQ0=7;MQRankSum=0.911;QD=11.81;ReadPosRankSum=2.266;VQSLOD=3.5213;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,1:44:99:0,108,982	0/1:6,11:16:0.57:179,0,1	0/0:3,0:3:1.76:0,2,27	0/0:3,0:3:3:0,3,28	0/0:15,1:17:22.16:0,22,387	0/0:13,1:15:12.82:0,13,302	0/0:28,2:30:28.66:0,29,588	0/0:12,0:11:26.87:0,27,248	0/0:17,1:20:20.85:0,21,386	0/1:6,14:20:15.28:235,0,15	1/1:4,10:14:26.87:209,27,0	0/0:23,1:23:33.69:0,34,498	0/0:17,2:19:27.82:0,28,449	0/0:15,1:18:15.61:0,16,310	0/0:20,0:19:18.87:0,19,366	0/0:16,0:16:30.03:0,30,292	1/1:5,31:37:74.68:580,75,0	1/1:7,18:26:18.44:306,18,0	0/0:14,0:13:24.02:0,24,228	0/0:19,0:21:44.75:0,45,419	0/0:28,0:26:63.10:0,63,624	0/0:25,1:26:51.92:0,52,499	0/0:19,0:20:44.85:0,45,419	0/0:27,0:27:66.12:0,66,664	0/0:10,2:14:6.61:0,7,223	0/0:15,1:16:24.03:0,24,233	0/0:24,0:24:63.04:0,63,613	0/0:7,0:8:23.88:0,24,227
chr10	86839523	.	GCCACA	G	1844.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.358;DP=745;FS=20.462;HRun=0;HaplotypeScore=146.9653;InbreedingCoeff=0.9157;MQ=57.02;MQ0=11;MQRankSum=-8.576;QD=42.89;ReadPosRankSum=-2.035;VQSLOD=1.7717;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,41:41:93.28:1939,93,0	0/0:10,0:10:30.08:0,30,810	0/0:24,0:3:9.03:0,9,269	0/0:32,0:10:27.08:0,27,749	0/0:21,0:21:60.19:0,60,1794	0/0:21,0:21:60.21:0,60,1893	0/0:46,0:45:99:0,135,4191	0/0:26,0:23:69.22:0,69,2028	0/0:25,0:25:75.26:0,75,2352	0/0:33,0:32:93.32:0,93,2778	0/0:13,0:13:36.12:0,36,1048	0/0:38,0:38:99:0,111,3407	0/0:23,0:23:69.24:0,69,2181	0/0:35,0:35:99:0,99,3111	0/0:20,0:19:60.19:0,60,1833	0/0:23,0:23:69.21:0,69,2088	0/0:42,0:42:99:0,120,3713	0/0:21,0:21:57.16:0,57,1723	0/0:22,0:18:54.19:0,54,1656	0/0:18,0:18:48.16:0,48,1522	0/0:75,0:75:99:0,220,6820	0/0:17,0:17:51.18:0,51,1617	0/0:4,0:4:12.03:0,12,311	0/0:46,0:46:99:0,126,3997	0/0:22,0:22:66.23:0,66,2037	0/0:25,0:25:75.26:0,75,2366	0/0:10,0:10:30.10:0,30,944	0/0:10,0:10:27.09:0,27,857
chr10	86839916	.	GC	G	6544.53	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.004;DP=662;FS=7.115;HRun=5;HaplotypeScore=66.6814;InbreedingCoeff=0.9992;MQ=81.64;MQ0=0;MQRankSum=0.718;QD=29.48;ReadPosRankSum=0.958;VQSLOD=5.2964;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,48:50:99:1565,138,0	0/0:10,0:10:24.08:0,24,326	0/0:16,0:16:39.38:0,39,526	0/0:21,0:21:43.95:0,44,540	0/0:17,0:17:45.15:0,45,615	0/0:25,0:25:75.20:0,75,975	0/0:25,0:25:72.24:0,72,984	1/1:4,17:21:48.10:524,48,0	0/0:22,0:22:63.21:0,63,861	0/0:22,0:22:63.19:0,63,832	0/0:14,0:14:42.12:0,42,535	0/0:22,0:22:66.20:0,66,884	0/0:26,0:26:69.20:0,69,908	0/0:31,0:31:84.24:0,84,1127	0/0:28,0:28:81.24:0,81,1076	0/0:22,0:22:66.21:0,66,885	0/0:36,0:36:99:0,108,1464	0/0:28,0:28:81.23:0,81,1087	1/1:0,17:17:51.11:551,51,0	1/1:2,17:19:48.05:516,48,0	1/1:1,57:58:99:1667,147,0	0/0:19,0:19:57.19:0,57,774	0/0:15,0:15:45.15:0,45,615	0/0:29,0:29:78.25:0,78,1049	0/0:12,0:12:33.11:0,33,451	1/1:1,20:21:63.16:702,63,0	1/1:1,25:26:66.19:748,66,0	1/1:0,10:10:24.07:272,24,0
chr10	86840872	.	C	CCACAGACATGTGAACACA	20260.13	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=1.024;DP=732;FS=7.460;HRun=0;HaplotypeScore=288.7671;InbreedingCoeff=0.9839;MQ=54.73;MQ0=18;MQRankSum=-13.835;QD=65.99;ReadPosRankSum=-4.939;VQSLOD=2.6407;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:35:18.06:913,18,0	1/1:9,0:9:23.93:739,24,0	0/0:47,0:11:23.03:0,23,520	0/0:46,0:15:19.04:0,19,476	0/0:20,0:24:50.72:0,51,1947	0/0:20,0:23:62.76:0,63,2612	0/0:28,0:28:78.21:0,78,2843	1/1:29,0:26:66.68:2138,67,0	0/0:23,0:23:57.18:0,57,2188	1/1:32,0:31:81.70:2492,82,0	1/1:13,0:13:15.04:403,15,0	0/0:38,0:42:99:0,120,4161	0/0:28,0:30:78.03:0,78,2918	0/0:21,0:22:66.20:0,66,2521	0/0:21,0:23:57.19:0,57,2363	0/0:19,0:20:54.11:0,54,2082	1/1:12,0:22:24.08:1606,24,0	1/1:7,6:18:14.87:1077,15,0	1/1:15,0:14:39.13:1661,39,0	1/1:3,0:19:9.03:722,9,0	1/1:38,0:38:54.17:1316,54,0	0/0:11,0:11:27.08:0,27,886	0/0:11,0:11:24.08:0,24,999	0/0:45,0:52:99:0,141,5564	0/0:17,0:20:45.15:0,45,1957	1/1:37,0:36:99:4034,101,0	1/1:12,1:29:35.77:2198,36,0	1/1:9,0:9:23.34:961,23,0
chr10	86840879	.	C	CATGTGA	8175.79	PASS	AB=0.882;AC=14;AF=0.250;AN=56;BaseQRankSum=10.556;DP=764;FS=26.236;HRun=0;HaplotypeScore=204.7350;InbreedingCoeff=-0.1621;MQ=53.92;MQ0=27;MQRankSum=-11.898;QD=27.16;ReadPosRankSum=1.532;VQSLOD=3.0577;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:99:536,0,376	1/1:3,4:8:8.34:452,8,0	0/0:60,0:12:33.10:0,33,673	0/0:58,0:19:30.95:0,31,526	0/0:26,0:25:60.68:0,61,1305	0/0:24,0:24:69.69:0,70,1575	0/0:30,0:29:87.28:0,87,2031	0/1:24,6:29:99:1089,0,547	0/0:23,0:22:66.23:0,66,1562	0/1:22,7:30:99:1151,0,303	0/1:5,6:13:47.23:246,0,47	0/0:45,0:45:99:0,114,2587	0/0:28,0:28:78.27:0,78,1822	0/0:22,0:22:66.21:0,66,1537	0/0:25,0:25:75.26:0,75,1707	0/0:20,0:20:60.17:0,60,1354	0/1:20,0:19:99:369,0,159	0/1:19,0:18:29.99:379,0,30	0/1:8,6:14:99:891,0,107	0/1:14,0:14:99:180,0,193	0/1:38,1:39:99:471,0,383	0/0:12,0:12:27.06:0,27,565	0/0:15,0:15:30.10:0,30,710	0/0:51,0:51:99:0,138,3232	0/0:24,0:24:54.18:0,54,1249	0/1:27,14:41:99:1884,0,596	0/1:24,0:24:74.16:429,0,74	0/1:9,0:9:96.95:97,0,118
chr10	86841168	.	CA	C	632.94	PASS	AB=0.971;AC=3;AF=0.054;AN=56;BaseQRankSum=5.927;DP=556;FS=2.073;HRun=10;HaplotypeScore=64.5514;InbreedingCoeff=0.6052;MQ=72.62;MQ0=1;MQRankSum=1.786;QD=9.45;ReadPosRankSum=-1.005;VQSLOD=2.2069;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:5,29:34:80.97:703,81,0	0/0:13,0:13:27.03:0,27,279	0/1:32,1:28:35.83:36,0,281	0/0:11,2:12:16.69:0,17,145	0/0:24,0:24:37.09:0,37,614	0/0:25,0:26:69.19:0,69,763	0/0:19,0:19:45.12:0,45,498	0/0:19,0:21:41.92:0,42,430	0/0:17,0:17:48.12:0,48,524	0/0:17,0:17:21.59:0,22,429	0/0:13,1:14:10.04:0,10,337	0/0:18,0:18:48.04:0,48,506	0/0:14,1:15:16.14:0,16,405	0/0:18,0:18:50.88:0,51,521	0/0:13,0:14:38.94:0,39,412	0/0:14,0:15:35.92:0,36,370	0/0:23,0:25:43.77:0,44,667	0/0:23,0:23:54.15:0,54,597	0/0:21,0:22:50.97:0,51,545	0/0:16,0:16:16.02:0,16,392	0/0:16,0:16:45.12:0,45,498	0/0:14,0:14:30.08:0,30,332	0/0:22,0:22:57.15:0,57,631	0/0:21,0:21:57.15:0,57,630	0/0:21,0:21:28.46:0,28,538	0/0:27,0:28:68.99:0,69,732	0/0:29,1:30:58.12:0,58,855	0/0:7,0:7:18.05:0,18,199
chr10	86841270	.	A	AACACACACACACAC	2923.47	PASS	AB=0.923;AC=25;AF=0.463;AN=54;BaseQRankSum=-0.670;DP=629;FS=9.013;HRun=0;HaplotypeScore=232.7543;InbreedingCoeff=0.5899;MQ=59.93;MQ0=16;MQRankSum=-1.503;QD=8.31;ReadPosRankSum=-4.263;VQSLOD=0.5885;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:44,0:43:22.11:478,22,0	1/1:5,3:8:3.01:193,3,0	1/1:37,0:19:0.56:3,1,0	0/1:35,0:19:0:0,0,0	0/0:21,0:22:44.14:0,44,1295	0/0:17,0:21:33:0,33,787	0/0:25,0:25:29.94:0,30,958	1/1:21,0:19:18.75:163,19,0	0/0:17,0:21:27.08:0,27,807	0/1:19,0:19:19.03:422,0,19	./.	0/0:14,0:15:24.08:0,24,805	0/0:20,0:20:30.03:0,30,1023	0/0:26,0:27:31.33:0,31,1034	0/0:19,0:20:18.06:0,18,529	0/1:17,0:20:2.80:3,0,1220	1/1:21,0:21:22:462,22,0	0/1:15,0:15:11.93:99,0,12	1/1:16,0:16:8.10:220,8,0	1/1:10,0:14:5.99:89,6,0	1/1:30,0:45:5.44:119,5,0	0/0:18,0:19:27.02:0,27,660	0/0:15,0:16:7.69:0,8,239	0/0:47,0:50:51.91:0,52,2489	0/0:7,0:9:9.03:0,9,288	1/1:18,0:27:32.96:550,33,0	1/1:15,0:16:18.03:287,18,0	0/1:3,0:8:11.56:23,0,12
chr10	86841591	.	TAGG	T	10591.72	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=13.468;DP=569;FS=1.074;HRun=0;HaplotypeScore=85.6996;InbreedingCoeff=0.9880;MQ=74.41;MQ0=0;MQRankSum=-5.472;QD=38.38;ReadPosRankSum=2.409;VQSLOD=5.8761;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,48:53:99:1862,114,0	1/1:0,5:5:8.96:118,9,0	0/0:19,0:19:51.16:0,51,1066	0/0:23,0:23:68.24:0,68,1339	0/0:19,0:19:57.02:0,57,1100	0/0:21,0:21:63.20:0,63,1383	0/0:26,0:26:69.20:0,69,1433	1/1:0,28:28:81.25:1276,81,0	0/0:18,0:18:54.16:0,54,1135	1/1:0,17:17:48.16:797,48,0	1/1:0,7:7:18.06:277,18,0	0/0:23,0:23:69.23:0,69,1522	0/0:15,0:15:36.11:0,36,772	0/0:30,0:30:81.24:0,81,1668	0/0:19,0:19:57.17:0,57,1169	0/0:20,0:20:51.14:0,51,1067	1/1:1,34:35:84.27:1398,84,0	1/1:0,16:16:36.12:599,36,0	1/1:1,14:15:39.06:543,39,0	1/1:1,9:10:21.07:337,21,0	1/1:2,38:40:76.61:1225,77,0	0/0:12,0:12:36.11:0,36,773	0/0:14,0:14:42.12:0,42,890	0/0:28,0:28:81.28:0,81,1791	0/0:6,0:6:15.05:0,15,338	1/1:1,15:16:45.15:741,45,0	1/1:2,18:20:51.17:821,51,0	1/1:1,13:14:36.12:598,36,0
chr10	86845630	.	TCAAAACAAAACAAAA	T	2105.60	PASS	AB=1.000;AC=21;AF=0.404;AN=52;BaseQRankSum=6.410;DP=406;FS=3.571;HRun=0;HaplotypeScore=176.9984;InbreedingCoeff=0.7763;MQ=70.73;MQ0=3;MQRankSum=-5.430;QD=14.72;ReadPosRankSum=-0.503;VQSLOD=2.7560;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:18:11.94:0,12,186	./.	0/1:17,0:12:1.12:1,0,27	0/0:40,0:23:4.90:0,5,74	0/0:13,0:13:30.10:0,30,1749	0/0:13,0:13:27.09:0,27,1835	0/0:20,0:20:27.09:0,27,1463	1/1:20,0:19:15.02:207,15,0	0/0:18,0:18:33.10:0,33,1948	1/1:7,0:7:2.37:8,2,0	1/1:6,0:7:3.01:105,3,0	0/0:15,0:15:30.08:0,30,1610	0/0:14,0:14:30.10:0,30,1859	0/0:17,0:17:27.09:0,27,1232	0/0:16,0:16:39.13:0,39,1961	0/0:21,0:21:45.08:0,45,2453	1/1:14,0:15:5.46:119,5,0	1/1:17,0:18:10.09:176,10,0	1/1:19,2:21:12.04:401,12,0	1/1:3,0:3:3.01:115,3,0	1/1:8,0:8:3.01:45,3,0	0/0:8,0:8:21.07:0,21,912	0/0:6,0:6:15.05:0,15,1045	0/0:31,0:31:67.11:0,67,4036	0/0:13,0:13:33.11:0,33,2247	1/1:5,5:10:18.06:670,18,0	1/1:13,3:16:14.84:442,15,0	./.
chr10	86845654	.	AAC	A	355.63	PASS	AB=0.911;AC=7;AF=0.135;AN=52;BaseQRankSum=7.112;DP=351;FS=0.691;HRun=0;HaplotypeScore=66.1085;InbreedingCoeff=-0.1615;MQ=55.97;MQ0=5;MQRankSum=-6.453;QD=5.56;ReadPosRankSum=0.212;VQSLOD=2.6946;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:25.52:0,26,430	./.	0/0:9,0:3:9.03:0,9,142	0/0:32,0:16:21.31:0,21,283	0/0:12,0:12:36.12:0,36,612	0/0:15,0:15:45.15:0,45,757	0/0:19,0:19:38.17:0,38,799	0/0:16,0:15:29.01:0,29,300	0/0:14,0:14:39.12:0,39,663	0/1:3,1:4:53.55:58,0,54	0/1:2,0:2:9.64:10,0,29	0/0:16,0:16:48.13:0,48,739	0/0:13,0:13:36.05:0,36,599	0/0:13,0:12:30.10:0,30,515	0/0:18,0:18:54.18:0,54,905	0/0:21,0:21:63.15:0,63,1022	0/1:13,3:14:99:221,0,100	0/1:7,4:11:99:136,0,144	0/1:9,0:9:8.87:9,0,171	0/0:3,0:3:3.52:0,4,62	0/0:5,0:5:11.70:0,12,118	0/0:11,0:10:30.10:0,30,490	0/0:10,0:10:30.10:0,30,482	0/0:31,0:31:64.14:0,64,1348	0/0:14,0:14:42.09:0,42,710	0/1:10,0:10:32.12:32,0,150	0/1:12,0:12:13.68:14,0,151	./.
chr10	86845659	.	AAC	A	448.70	PASS	AB=0.927;AC=9;AF=0.167;AN=54;BaseQRankSum=5.934;DP=353;FS=2.410;HRun=0;HaplotypeScore=63.5456;InbreedingCoeff=-0.2110;MQ=54.28;MQ0=6;MQRankSum=-6.706;QD=5.10;ReadPosRankSum=0.540;VQSLOD=2.3163;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:2.60:3,0,155	./.	0/0:8,0:3:9.03:0,9,129	0/0:32,0:16:26.92:0,27,276	0/0:12,0:12:36.12:0,36,603	0/0:15,0:15:45.15:0,45,766	0/0:16,0:16:45.15:0,45,737	0/1:17,2:18:99:158,0,271	0/0:14,0:14:39.12:0,39,650	0/0:4,0:4:0.65:0,1,76	0/1:2,0:2:6.01:6,0,36	0/0:15,0:15:42.12:0,42,657	0/0:13,0:13:36.12:0,36,622	0/0:12,0:11:30.10:0,30,515	0/0:18,0:18:51.17:0,51,857	0/0:20,0:20:60.14:0,60,981	0/0:17,0:15:6.30:0,6,240	0/1:12,0:12:26.43:26,0,237	0/1:8,2:8:95.19:95,0,143	0/1:2,1:3:35.83:40,0,36	0/1:5,0:5:35.07:35,0,55	0/0:11,0:10:30.10:0,30,481	0/0:10,0:10:30.10:0,30,482	0/0:31,0:31:85.16:0,85,1402	0/0:15,0:15:45.10:0,45,756	0/1:12,0:12:78.74:79,0,196	0/1:10,2:12:99:138,0,113	0/0:2,0:2:6.02:0,6,76
chr10	86846004	.	GTA	G	1598.48	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.519;DP=676;FS=0.626;HRun=0;HaplotypeScore=83.5603;InbreedingCoeff=0.9426;MQ=67.15;MQ0=1;MQRankSum=1.686;QD=34.01;ReadPosRankSum=0.285;VQSLOD=5.8076;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,2120	0/0:3,0:3:9.03:0,9,174	0/0:14,0:13:39.13:0,39,692	0/0:16,0:16:24.45:0,24,620	0/0:21,0:20:54.19:0,54,1032	0/0:25,0:25:60.19:0,60,1106	0/0:27,0:27:81.28:0,81,1529	0/0:39,0:38:99:0,114,2129	0/0:37,0:37:99:0,99,1896	0/0:21,0:21:63.21:0,63,1182	0/0:19,0:19:57.20:0,57,1083	0/0:35,0:35:93.30:0,93,1737	0/0:19,0:19:57.20:0,57,1090	0/0:33,0:33:96.33:0,96,1821	0/0:24,0:24:66.23:0,66,1268	0/0:27,0:27:81.28:0,81,1529	0/0:33,0:33:99:0,99,1867	0/0:26,0:26:75.26:0,75,1445	0/0:23,0:23:66.23:0,66,1265	0/0:16,0:16:48.16:0,48,907	1/1:1,46:46:99:1693,111,0	0/0:13,0:13:39.13:0,39,731	0/0:20,0:20:60.19:0,60,1124	0/0:18,0:18:45.15:0,45,838	0/0:9,0:9:27.09:0,27,501	0/0:22,0:22:63.22:0,63,1207	0/0:31,0:31:81.23:0,81,1442	0/0:18,0:18:45.15:0,45,869
chr10	86851651	.	GGTGTGT	G	2724.58	PASS	AB=0.786;AC=19;AF=0.352;AN=54;BaseQRankSum=5.782;DP=591;FS=1.215;HRun=0;HaplotypeScore=143.9626;InbreedingCoeff=0.8161;MQ=64.82;MQ0=5;MQRankSum=-7.018;QD=13.56;ReadPosRankSum=-0.460;VQSLOD=2.6818;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:24:12.04:0,12,330	1/1:4,8:13:15.05:306,15,0	0/0:16,0:11:0.47:0,0,1	./.	0/0:18,0:21:29.30:0,29,842	0/0:21,0:25:39.12:0,39,855	0/0:24,0:25:36.12:0,36,1031	1/1:21,11:31:24.34:496,24,0	0/0:21,0:26:36.11:0,36,915	1/1:14,9:24:27.07:494,27,0	1/1:8,8:17:3.90:63,4,0	0/0:20,0:22:48.16:0,48,1398	0/0:21,0:22:42.13:0,42,1142	0/0:16,0:20:27.09:0,27,752	0/0:17,0:17:33.10:0,33,918	0/0:13,0:17:18.88:0,19,688	1/1:13,8:21:6.02:123,6,0	0/0:24,0:29:39.13:0,39,1015	1/1:9,5:17:21.96:393,22,0	1/1:11,9:23:11.41:174,11,0	0/0:17,3:20:3.01:0,3,77	0/0:19,0:20:35.31:0,35,1030	0/0:15,0:18:33.11:0,33,886	0/0:19,0:18:30.10:0,30,908	0/0:22,0:28:54.15:0,54,1336	0/1:8,2:11:9.70:153,0,10	1/1:9,19:30:26.92:514,27,0	1/1:5,6:13:12.04:203,12,0
chr10	86851727	.	T	TAA	655.85	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.171;DP=531;FS=11.850;HRun=1;HaplotypeScore=89.0474;InbreedingCoeff=0.9651;MQ=63.68;MQ0=1;MQRankSum=-0.889;QD=34.52;ReadPosRankSum=1.131;VQSLOD=2.7955;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:33.08:0,33,456	0/0:13,0:13:36.12:0,36,541	0/0:9,0:5:12.02:0,12,139	0/0:15,0:12:23.54:0,24,246	0/0:15,0:15:45.15:0,45,683	0/0:11,0:11:33.09:0,33,481	0/0:15,0:15:39.12:0,39,573	0/0:42,0:42:99:0,100,1679	0/0:15,0:15:36.11:0,36,528	0/0:25,0:25:60.07:0,60,827	0/0:20,0:20:54.17:0,54,793	0/0:17,0:17:45.15:0,45,679	0/0:16,0:16:48.14:0,48,678	0/0:17,0:17:45.12:0,45,636	0/0:20,0:20:57.14:0,57,784	0/0:17,0:17:45.15:0,45,687	0/0:28,0:28:72.20:0,72,1045	1/1:1,18:19:39.13:751,39,0	0/0:17,0:17:45.08:0,45,583	0/0:28,0:28:72.22:0,72,1038	0/0:16,0:16:35.91:0,36,525	0/0:19,0:19:57.18:0,57,832	0/0:29,0:29:87.24:0,87,1225	0/0:10,0:10:27.07:0,27,380	0/0:24,0:24:72.22:0,72,1054	0/0:18,0:18:54.16:0,54,785	0/0:29,0:29:81.20:0,81,1161	0/0:11,0:11:27.08:0,27,411
chr10	86852129	.	C	CT	5838.79	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-12.833;DP=744;FS=1.492;HRun=5;HaplotypeScore=64.8371;InbreedingCoeff=0.9796;MQ=63.21;MQ0=9;MQRankSum=1.388;QD=32.26;ReadPosRankSum=-4.355;VQSLOD=3.4726;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,147,1580	0/0:10,0:10:24.05:0,24,250	0/0:15,0:5:7.83:0,8,69	0/0:14,0:8:13.76:0,14,119	0/0:27,0:27:81.19:0,81,862	0/0:26,0:26:78.18:0,78,830	0/0:30,0:30:78.20:0,78,838	1/1:4,26:30:75.23:971,75,0	0/0:28,0:28:84.20:0,84,895	0/0:30,0:30:72.16:0,72,766	0/0:24,0:24:51.12:0,51,548	0/0:29,0:29:78.19:0,78,838	0/0:23,0:23:63.14:0,63,668	0/0:24,0:24:66.16:0,66,709	0/0:25,0:25:69.14:0,69,725	0/0:27,0:27:75.19:0,75,806	0/0:33,0:33:99:0,99,1064	0/0:22,0:22:60.15:0,60,645	1/1:3,16:19:45.14:578,45,0	1/1:1,26:27:72.11:890,72,0	1/1:5,25:31:69.22:905,69,0	0/0:32,0:32:93.20:0,93,983	0/0:30,0:30:78.18:0,78,830	0/0:36,0:36:99:0,99,1064	0/0:23,0:23:60.15:0,60,645	1/1:1,29:30:87.25:1113,87,0	1/1:2,36:38:90.12:1184,90,0	1/1:1,5:6:15.05:197,15,0
chr10	86854278	.	G	GA	8266.23	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-15.765;DP=715;FS=0.608;HRun=9;HaplotypeScore=68.1154;InbreedingCoeff=0.9948;MQ=77.66;MQ0=0;MQRankSum=-0.093;QD=26.16;ReadPosRankSum=-1.722;VQSLOD=4.6980;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,116,1156	1/1:0,13:13:39.11:431,39,0	0/0:24,0:24:29.11:0,29,329	0/0:14,1:14:17.75:0,18,220	0/0:24,0:24:59.96:0,60,521	0/0:32,0:32:89.97:0,90,781	0/0:20,1:22:16.84:0,17,363	1/1:8,24:34:81.29:824,81,0	0/0:23,0:23:59.97:0,60,521	1/1:5,24:29:72.12:764,72,0	1/1:1,15:17:38.94:412,39,0	0/0:21,0:21:14.89:0,15,357	0/0:22,0:22:53.97:0,54,465	0/0:22,0:23:62:0,62,523	0/0:30,0:30:83.98:0,84,729	0/0:19,0:19:56.97:0,57,491	1/1:5,40:45:99:1228,111,0	1/1:4,23:27:63.17:697,63,0	1/1:2,24:26:49.11:738,49,0	1/1:3,20:24:62.88:638,63,0	1/1:2,28:30:69.19:763,69,0	0/0:17,0:17:47.97:0,48,412	0/0:21,0:21:56.98:0,57,494	0/0:31,0:31:89.94:0,90,772	0/0:23,0:23:57.87:0,58,496	1/1:3,28:31:84.18:907,84,0	1/1:3,23:26:50.94:564,51,0	1/1:2,12:14:27.07:299,27,0
chr10	86856023	.	T	TA	597.63	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.559;DP=623;FS=8.327;HRun=8;HaplotypeScore=61.0963;InbreedingCoeff=0.8973;MQ=76.15;MQ0=0;MQRankSum=-1.116;QD=27.17;ReadPosRankSum=0.892;VQSLOD=4.2457;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:91.28:0,91,985	0/0:7,0:7:21.01:0,21,192	0/0:13,0:13:17.20:0,17,145	0/0:13,0:12:6.33:0,6,101	0/0:22,0:22:50.24:0,50,458	0/0:22,0:22:63.02:0,63,572	0/0:23,1:24:28.39:0,28,510	0/0:35,0:35:90.02:0,90,818	0/0:26,0:26:69.03:0,69,631	0/0:18,0:18:51.02:0,51,465	0/0:13,0:13:29.15:0,29,273	0/0:25,0:25:69.01:0,69,627	0/0:23,0:23:57.02:0,57,522	0/0:25,0:25:75.02:0,75,680	0/0:18,0:18:54.03:0,54,494	0/0:27,0:27:75.01:0,75,680	0/0:44,0:44:99:0,123,1120	1/1:0,22:22:60.18:692,60,0	0/0:15,0:15:33.01:0,33,302	0/0:19,0:19:57.03:0,57,521	0/0:16,0:16:39.02:0,39,357	0/0:16,0:16:45:0,45,407	0/0:15,0:15:39.01:0,39,357	0/0:27,0:27:77.99:0,78,706	0/0:19,0:19:51.02:0,51,467	0/0:29,0:29:75:0,75,677	0/0:30,0:30:81.04:0,81,741	0/0:20,0:19:60.03:0,60,549
chr10	86857416	.	A	AT	4694.67	PASS	AB=0.923;AC=28;AF=0.500;AN=56;BaseQRankSum=2.096;DP=572;FS=8.319;HRun=11;HaplotypeScore=84.5185;InbreedingCoeff=0.8673;MQ=74.71;MQ0=1;MQRankSum=-2.757;QD=15.34;ReadPosRankSum=-1.471;VQSLOD=4.5865;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:25:50.49:446,50,0	1/1:5,1:10:20.28:125,20,0	0/0:27,0:20:23.15:0,23,199	0/1:23,1:19:29.11:29,0,94	0/0:24,0:24:40.35:0,40,419	0/0:23,0:24:64.76:0,65,490	0/0:22,0:22:62.71:0,63,480	1/1:8,17:26:53.93:527,54,0	0/0:15,0:15:29.86:0,30,232	1/1:5,2:21:22.73:206,23,0	1/1:3,0:14:34.08:170,34,0	0/0:27,0:27:65.69:0,66,504	0/0:13,0:13:20.85:0,21,162	0/0:18,0:18:35.80:0,36,270	0/0:12,0:12:23.89:0,24,186	0/1:20,2:22:4.26:4,0,316	1/1:4,2:18:43.21:263,43,0	1/1:3,1:19:42.86:233,43,0	1/1:6,12:21:47.43:422,47,0	1/1:3,20:23:59.88:564,60,0	1/1:6,6:13:25.12:225,25,0	0/0:22,0:22:53.71:0,54,411	0/0:14,0:14:29.85:0,30,231	0/0:18,0:18:41.82:0,42,325	0/0:29,0:29:71.66:0,72,554	1/1:10,19:30:39.72:570,40,0	1/1:6,19:25:63.12:637,63,0	1/1:4,9:13:9.82:275,10,0
chr10	86857474	.	C	CT	3155.81	PASS	AB=0.774;AC=21;AF=0.375;AN=56;BaseQRankSum=-2.988;DP=512;FS=0.000;HRun=12;HaplotypeScore=68.3030;InbreedingCoeff=0.4572;MQ=77.92;MQ0=0;MQRankSum=-2.696;QD=12.33;ReadPosRankSum=-3.708;VQSLOD=2.4605;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:15:20.78:0,21,153	0/1:1,3:4:9.89:76,0,10	0/0:23,0:21:17.61:0,18,120	0/0:14,0:14:1.91:0,2,83	0/0:12,0:15:30.89:0,31,209	0/0:22,0:23:43.71:0,44,310	0/0:16,1:18:20.57:0,21,305	1/1:9,18:28:30.24:417,30,0	0/0:18,0:18:35.59:0,36,250	0/1:14,5:19:70.41:185,0,70	1/1:8,6:14:27.02:250,27,0	0/0:20,0:21:49.68:0,50,342	0/1:14,0:14:0.27:0,0,140	0/0:15,0:15:35.73:0,36,262	0/1:14,2:16:31.59:32,0,126	0/0:11,0:12:28.80:0,29,197	0/1:12,10:22:45.60:242,0,46	0/1:12,8:20:13.76:204,0,14	0/1:16,7:23:21.12:253,0,21	1/1:13,7:21:44.82:393,45,0	1/1:1,11:13:33.35:302,33,0	0/0:18,0:18:40.75:0,41,290	0/0:18,1:20:8.62:0,9,217	0/0:22,0:22:53.63:0,54,392	0/0:20,1:21:15.51:0,16,274	1/1:16,9:27:7.28:342,7,0	1/1:11,8:19:17.09:308,17,0	1/1:8,8:16:38.93:348,39,0
chr10	86857665	.	CAG	C	351.43	PASS	AB=0.909;AC=12;AF=0.214;AN=56;BaseQRankSum=3.300;DP=820;FS=4.197;HRun=0;HaplotypeScore=122.3510;InbreedingCoeff=-0.1041;MQ=60.35;MQ0=16;MQRankSum=1.527;QD=0.86;ReadPosRankSum=1.711;VQSLOD=2.2722;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:42:2.99:0,3,23	0/0:10,0:10:8.96:0,9,72	1/1:59,1:22:4.07:12,4,0	0/1:81,0:21:0:0,0,0	0/1:24,0:24:49.97:50,0,292	0/1:27,6:33:56.05:56,0,507	0/1:36,1:37:26.29:26,0,713	0/0:49,0:49:49.33:0,49,346	0/0:20,2:22:2.06:0,2,452	0/0:26,0:26:38.63:0,39,313	0/0:12,0:12:3:0,3,27	0/1:34,3:37:72.34:72,0,728	0/0:21,1:23:8.96:0,9,525	0/1:27,1:30:8.58:9,0,672	0/1:30,4:34:58.04:58,0,800	0/0:22,0:22:32.59:0,33,462	0/0:22,0:23:14.42:0,14,104	0/0:22,0:23:23.93:0,24,207	0/0:22,0:24:18.88:0,19,127	0/0:34,0:34:11.72:0,12,79	0/0:20,0:18:11.96:0,12,93	0/1:20,3:24:35.14:35,0,433	0/0:15,0:15:20.43:0,20,283	0/1:13,2:16:99:122,0,284	0/1:26,6:32:51.09:51,0,481	0/0:26,0:26:52.19:0,52,450	0/0:19,0:19:8.94:0,9,67	0/0:19,0:18:26.90:0,27,240
chr10	86857694	.	A	AGAGAGTGAGT	5295.28	PASS	AB=0.992;AC=23;AF=0.411;AN=56;BaseQRankSum=6.724;DP=863;FS=11.387;HRun=0;HaplotypeScore=252.4722;InbreedingCoeff=0.7332;MQ=57.54;MQ0=17;MQRankSum=-7.198;QD=14.23;ReadPosRankSum=-4.656;VQSLOD=1.6957;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:39:4.27:17,0,4	1/1:1,1:12:8.99:317,9,0	0/0:56,0:16:17.85:0,18,336	0/0:99,0:27:41.59:0,42,713	0/0:22,0:22:57.17:0,57,1091	0/0:23,0:23:45.15:0,45,1170	0/0:41,0:41:99:0,113,2301	0/1:51,0:50:97.98:360,0,98	0/0:23,0:23:57.16:0,57,1334	1/1:5,0:33:70.11:1346,70,0	1/1:3,1:23:2.52:157,3,0	0/0:31,0:31:87.24:0,87,2018	0/0:21,0:20:57:0,57,1385	0/0:34,0:34:87.23:0,87,1981	0/0:31,0:31:81.26:0,81,2110	0/0:28,0:28:77.61:0,78,1630	1/1:10,13:32:17.89:524,18,0	1/1:20,0:20:31.38:665,31,0	0/1:27,0:25:39.21:337,0,39	1/1:24,0:24:9.27:81,9,0	1/1:33,0:30:12.17:106,12,0	0/0:22,0:22:60.06:0,60,1330	0/0:14,0:14:30.09:0,30,687	0/0:15,0:15:38.49:0,38,1002	0/0:30,0:30:57.16:0,57,1398	1/1:34,0:34:29.44:708,29,0	1/1:7,0:24:6.43:334,6,0	1/1:18,0:17:17.95:344,18,0
chr10	86859034	.	GGCAAAAA	G	991.23	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.928;DP=612;FS=10.597;HRun=0;HaplotypeScore=150.4125;InbreedingCoeff=0.9682;MQ=74.62;MQ0=0;MQRankSum=-5.432;QD=43.10;ReadPosRankSum=0.817;VQSLOD=2.9295;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:39.13:1086,39,0	0/0:4,0:4:12.04:0,12,502	0/0:15,0:14:36:0,36,1003	0/0:10,0:10:26.23:0,26,647	0/0:35,0:35:99:0,102,4223	0/0:24,0:24:72.25:0,72,3022	0/0:19,0:19:57.18:0,57,2023	0/0:42,0:42:99:0,126,5170	0/0:21,0:21:63.22:0,63,2531	0/0:24,0:24:72.25:0,72,2939	0/0:33,0:33:99:0,99,4109	0/0:25,0:25:75.23:0,75,2809	0/0:23,0:23:69.22:0,69,2786	0/0:19,0:19:57.18:0,57,2281	0/0:17,0:17:51.18:0,51,2062	0/0:27,0:27:81.25:0,81,2978	0/0:19,0:19:57.20:0,57,2314	0/0:26,0:26:78.24:0,78,2920	0/0:25,0:25:75.26:0,75,2992	0/0:25,0:25:75.25:0,75,2945	0/0:12,0:12:30.07:0,30,1154	0/0:12,0:12:36.02:0,36,1325	0/0:16,0:16:45.15:0,45,1826	0/0:12,0:12:36.12:0,36,1462	0/0:19,0:19:57.20:0,57,2249	0/0:28,0:28:84.27:0,84,3016	0/0:33,0:32:96.26:0,96,3536	0/0:24,0:24:72.21:0,72,2897
chr10	86859065	.	T	TA	6730.99	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-14.253;DP=521;FS=1.123;HRun=3;HaplotypeScore=52.3631;InbreedingCoeff=0.9088;MQ=64.80;MQ0=0;MQRankSum=-0.316;QD=37.60;ReadPosRankSum=-2.051;VQSLOD=4.3588;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:63.17:0,63,779	0/0:4,0:4:12.04:0,12,149	0/0:7,0:6:18.03:0,18,201	0/1:6,0:6:9.30:13,0,9	0/0:31,0:31:93.27:0,93,1133	0/0:23,0:23:63.20:0,63,781	0/0:11,0:11:33.10:0,33,409	1/1:1,34:35:99:1439,102,0	0/0:13,0:13:36.11:0,36,446	0/0:24,0:24:69.22:0,69,855	0/0:26,0:26:69.22:0,69,855	0/0:13,0:13:39.12:0,39,483	0/0:21,0:21:60.19:0,60,743	0/0:23,0:23:63.20:0,63,781	0/0:16,0:16:48.15:0,48,595	0/0:18,0:18:54.17:0,54,669	0/0:17,0:17:51.16:0,51,630	0/0:22,0:22:66.13:0,66,785	1/1:4,21:25:63.20:889,63,0	1/1:0,27:27:78.26:1106,78,0	1/1:0,10:10:27.09:389,27,0	0/0:5,0:5:12.04:0,12,149	0/0:14,0:14:36.11:0,36,446	0/0:13,0:13:39.12:0,39,483	0/0:16,0:16:45.14:0,45,557	1/1:4,17:21:16.98:692,17,0	1/1:1,28:29:81.27:1166,81,0	1/1:0,25:25:72.24:1037,72,0
chr10	86859331	.	TA	T	4434.61	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.404;DP=575;FS=4.679;HRun=9;HaplotypeScore=58.9648;InbreedingCoeff=0.9834;MQ=80.13;MQ0=0;MQRankSum=-1.889;QD=23.10;ReadPosRankSum=2.536;VQSLOD=5.8914;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.22:0,75,866	0/0:8,0:8:15.04:0,15,173	0/0:19,0:19:17.87:0,18,263	0/0:15,0:15:25.30:0,25,262	0/0:39,0:41:99:0,111,1225	0/0:21,0:21:60.18:0,60,692	0/0:28,0:28:75.21:0,75,855	1/1:2,25:27:75.01:680,75,0	0/0:18,0:18:39.10:0,39,439	0/0:19,0:19:51.15:0,51,589	0/0:17,0:19:47.81:0,48,514	0/0:10,0:10:30.09:0,30,344	0/0:10,0:10:30.08:0,30,338	0/0:17,0:17:39.12:0,39,450	0/0:16,0:16:45.12:0,45,510	0/0:21,0:21:54.16:0,54,623	0/0:35,0:35:99:0,102,1152	1/1:2,25:27:69.03:632,69,0	1/1:3,22:25:66.03:604,66,0	1/1:2,16:18:48.02:439,48,0	1/1:0,11:11:30.02:275,30,0	0/0:12,1:13:8.63:0,9,345	0/0:18,1:19:20.68:0,21,492	0/0:8,0:8:24.07:0,24,277	0/0:18,0:18:51.15:0,51,589	1/1:5,18:23:22.41:460,22,0	1/1:6,29:35:78.03:714,78,0	1/1:3,23:26:69.04:632,69,0
chr10	86860825	.	TA	T	2158.23	PASS	AB=0.883;AC=20;AF=0.370;AN=54;BaseQRankSum=-1.756;DP=332;FS=1.028;HRun=11;HaplotypeScore=53.8350;InbreedingCoeff=0.6582;MQ=60.18;MQ0=8;MQRankSum=1.306;QD=13.41;ReadPosRankSum=-0.781;VQSLOD=3.3113;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:50.94:419,51,0	./.	0/0:20,0:10:13.02:0,13,126	0/0:22,0:8:15.03:0,15,154	0/0:12,0:12:26.90:0,27,270	0/0:16,0:16:45.07:0,45,467	0/0:9,0:9:18.02:0,18,181	1/1:9,19:25:35.61:412,36,0	0/0:6,0:6:11.94:0,12,128	0/1:2,1:6:27.14:35,0,27	0/0:2,0:5:11.32:0,11,55	0/0:14,0:15:44.93:0,45,453	0/1:8,1:10:1.58:2,0,145	0/1:9,1:10:0.58:1,0,200	0/0:12,1:13:11.46:0,11,327	0/0:13,1:14:17.48:0,17,390	0/1:2,1:6:12.16:12,0,38	0/0:4,0:9:14.45:0,14,91	1/1:8,11:16:32.95:271,33,0	1/1:2,10:12:29.88:238,30,0	1/1:0,1:1:3:25,3,0	0/0:2,0:2:3.01:0,3,32	0/0:4,0:4:12.03:0,12,127	0/0:10,0:10:21.04:0,21,217	0/0:11,1:12:8.44:0,8,295	1/1:3,13:16:38.91:316,39,0	1/1:1,15:16:38.95:320,39,0	1/1:2,13:16:37.97:301,38,0
chr10	86862578	.	CCACAGCAGAGCCTGTGACCACGT	C	1360.36	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=4.923;DP=765;FS=11.975;HRun=0;HaplotypeScore=455.2681;InbreedingCoeff=0.1534;MQ=78.99;MQ0=0;MQRankSum=-3.854;QD=6.67;ReadPosRankSum=-4.172;VQSLOD=0.1047;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,44:49:24.08:1374,24,0	0/0:8,0:8:15.03:0,15,996	0/0:18,0:18:38.30:0,38,2022	0/0:23,0:23:56.01:0,56,2109	0/0:15,0:15:36.12:0,36,3351	0/0:20,0:20:48.10:0,48,3200	0/0:37,0:37:96.28:0,96,8487	0/1:18,0:18:41.10:41,0,2158	0/0:32,0:32:90.31:0,90,8548	0/1:26,0:26:34.52:35,0,4126	0/0:12,0:12:27.09:0,27,2284	0/0:40,0:40:99:0,120,10049	0/0:36,0:36:99:0,102,9828	0/0:48,0:48:99:0,129,11357	0/0:23,0:23:63.16:0,63,4256	0/0:29,0:29:81.25:0,81,6696	0/0:34,0:34:31.32:0,31,7530	0/0:42,0:42:99:0,117,10572	0/1:20,0:20:6.82:7,0,2108	0/1:16,0:16:2.78:3,0,2450	0/1:66,0:66:13.38:13,0,11848	0/0:20,0:20:51.15:0,51,4612	0/0:16,0:16:36.12:0,36,3206	0/0:34,0:34:96.33:0,96,9761	0/0:22,0:22:66.21:0,66,6195	0/0:31,0:31:17.81:0,18,5574	0/0:21,0:19:43.42:0,43,4258	0/1:9,0:9:21.46:21,0,1220
chr10	86863215	.	CTGAATGAATGAA	C	6125.16	PASS	AB=0.582;AC=17;AF=0.304;AN=56;BaseQRankSum=13.094;DP=706;FS=4.645;HRun=0;HaplotypeScore=254.9448;InbreedingCoeff=0.7221;MQ=77.48;MQ0=2;MQRankSum=-11.356;QD=27.84;ReadPosRankSum=-0.365;VQSLOD=3.5737;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:39:57.18:0,57,2090	0/1:2,0:7:3.44:3,0,36	0/0:32,0:29:12:0,12,413	0/0:30,0:27:16.52:0,17,845	0/0:40,0:40:87.30:0,87,4707	0/0:28,0:28:57.20:0,57,3334	0/0:25,0:25:45.15:0,45,2635	1/1:31,0:31:6.02:103,6,0	0/0:25,0:25:42.14:0,42,2471	0/1:6,0:25:25.48:25,0,82	0/1:9,0:28:2.62:3,0,85	0/0:25,0:25:60.21:0,60,3455	0/0:24,0:24:54.19:0,54,3073	0/0:21,0:21:42.14:0,42,2381	0/0:40,0:40:72.25:0,72,4129	0/0:32,0:34:81.27:0,81,4371	0/0:12,0:18:2.71:0,3,48	0/0:20,0:20:42.14:0,42,2247	1/1:10,2:12:6.02:155,6,0	1/1:6,19:25:57.20:1883,57,0	1/1:14,11:25:16.92:606,17,0	0/0:19,0:19:36.12:0,36,1705	0/0:17,0:17:36.12:0,36,1900	0/0:16,0:16:39.13:0,39,2274	0/0:32,0:32:66.22:0,66,3506	1/1:13,11:27:40.38:1207,40,0	1/1:12,16:28:48.16:1618,48,0	1/1:7,5:12:15.05:522,15,0
chr10	86863722	.	GA	G	2449.64	PASS	AB=0.843;AC=15;AF=0.268;AN=56;BaseQRankSum=10.473;DP=616;FS=2.701;HRun=11;HaplotypeScore=74.9805;InbreedingCoeff=0.6913;MQ=77.15;MQ0=0;MQRankSum=-1.098;QD=12.31;ReadPosRankSum=0.089;VQSLOD=3.6044;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,1091	0/0:7,0:9:20.71:0,21,181	0/1:20,1:17:17.55:18,0,137	0/1:20,0:18:2.77:3,0,162	0/0:22,0:25:59.92:0,60,585	0/0:16,0:16:38.57:0,39,393	0/0:28,0:28:63.11:0,63,659	1/1:4,21:25:62.91:517,63,0	0/0:17,0:17:48.08:0,48,499	0/0:23,0:24:50.96:0,51,521	0/0:14,1:15:11.26:0,11,301	0/0:28,2:32:34.58:0,35,738	0/0:15,0:15:39.03:0,39,389	0/0:30,1:33:64.95:0,65,835	0/0:26,0:26:75.18:0,75,793	0/0:15,0:16:38.93:0,39,398	0/0:31,1:33:61.19:0,61,806	0/0:23,0:23:57.11:0,57,590	1/1:10,17:27:4.33:366,4,0	1/1:5,17:22:15.94:337,16,0	1/1:5,25:30:32.16:545,32,0	0/0:22,0:22:50.91:0,51,517	0/0:10,0:10:22.30:0,22,227	0/0:23,0:24:62.97:0,63,629	0/0:11,0:11:30.05:0,30,310	1/1:8,21:29:7.92:476,8,0	0/1:5,14:19:37.93:294,0,38	1/1:0,6:6:8.99:74,9,0
chr10	86864760	.	TG	T	615.32	PASS	AB=0.964;AC=4;AF=0.071;AN=56;BaseQRankSum=6.661;DP=555;FS=4.058;HRun=1;HaplotypeScore=51.3275;InbreedingCoeff=0.4803;MQ=71.17;MQ0=0;MQRankSum=-0.026;QD=14.65;ReadPosRankSum=-0.476;VQSLOD=2.9207;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:51.17:697,51,0	0/0:5,0:5:15.05:0,15,224	0/1:12,1:11:5.77:6,0,246	0/1:7,0:7:22.27:22,0,154	0/0:25,0:25:75.24:0,75,1091	0/0:29,0:29:87.28:0,87,1274	0/0:12,0:12:36.11:0,36,518	0/0:28,0:28:81.23:0,81,1152	0/0:21,0:21:63.20:0,63,917	0/0:26,0:26:78.24:0,78,1104	0/0:20,0:20:60.17:0,60,840	0/0:21,0:21:63.21:0,63,939	0/0:23,0:23:69.05:0,69,964	0/0:15,0:15:42.14:0,42,627	0/0:24,0:24:72.23:0,72,1057	0/0:16,0:16:48.10:0,48,636	0/0:20,0:20:60.20:0,60,886	0/0:23,0:23:69.15:0,69,943	0/0:18,0:18:54.14:0,54,746	0/0:34,0:34:99:0,102,1470	0/0:4,0:4:12.04:0,12,179	0/0:24,0:24:72.17:0,72,1014	0/0:15,0:15:45.13:0,45,632	0/0:15,0:15:42.11:0,42,582	0/0:14,0:14:39.10:0,39,545	0/0:27,0:27:81.18:0,81,1156	0/0:31,0:31:93.30:0,93,1358	0/0:23,0:23:69.17:0,69,978
chr10	86865587	.	A	AT	5454.43	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=5.699;DP=666;FS=14.144;HRun=6;HaplotypeScore=76.2308;InbreedingCoeff=0.9961;MQ=79.13;MQ0=0;MQRankSum=-2.061;QD=32.66;ReadPosRankSum=-0.719;VQSLOD=3.4776;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:99:0,135,1356	0/0:9,0:9:27.06:0,27,275	0/0:14,0:14:35.34:0,35,323	0/0:19,0:19:20.72:0,21,393	0/0:21,0:21:57.10:0,57,568	0/0:29,0:29:84.13:0,84,827	0/0:34,0:34:90.17:0,90,904	1/1:4,31:35:93.28:1155,93,0	0/0:20,0:20:57.11:0,57,575	0/0:37,0:37:99:0,105,1061	0/0:18,0:18:54.12:0,54,550	0/0:23,0:23:66.11:0,66,659	0/0:24,0:24:69.14:0,69,698	0/0:19,0:19:57.10:0,57,568	0/0:29,0:29:81.17:0,81,820	0/0:23,0:22:66.15:0,66,673	0/0:25,0:25:66.15:0,66,673	0/0:25,0:25:75.14:0,75,755	1/1:3,26:29:78.24:971,78,0	1/1:0,24:24:66.21:830,66,0	1/1:2,16:18:45.14:566,45,0	0/0:19,0:19:51.10:0,51,514	0/0:21,0:21:60.12:0,60,605	0/0:27,0:27:75.17:0,75,765	0/0:17,0:17:48.11:0,48,489	1/1:4,27:31:53.66:988,54,0	1/1:3,22:25:60.19:755,60,0	1/1:0,5:5:15.05:189,15,0
chr10	86866473	.	G	GTA	2888.34	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-11.634;DP=644;FS=6.849;HRun=0;HaplotypeScore=83.6576;InbreedingCoeff=0.9988;MQ=87.73;MQ0=0;MQRankSum=-5.530;QD=44.44;ReadPosRankSum=1.969;VQSLOD=5.2329;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:72.25:1295,72,0	0/0:12,0:12:33.11:0,33,462	0/0:25,0:26:69.15:0,69,919	0/0:19,0:19:49.71:0,50,656	0/0:33,0:33:86.22:0,86,1137	0/0:25,0:25:69.23:0,69,965	0/0:17,0:17:45.14:0,45,614	0/0:44,0:44:99:0,120,1539	0/0:22,0:22:63.21:0,63,881	0/0:19,0:19:51.17:0,51,700	0/0:17,0:17:51.15:0,51,695	0/0:20,0:20:60.19:0,60,822	0/0:24,0:24:66.20:0,66,903	0/0:26,0:26:72.21:0,72,971	0/0:22,0:22:66.22:0,66,922	0/0:18,0:18:51.17:0,51,712	0/0:24,0:24:72.24:0,72,1007	1/1:3,35:39:96.33:1715,96,0	0/0:23,0:23:63.19:0,63,851	0/0:25,0:25:72.18:0,72,966	0/0:19,0:19:54.18:0,54,754	0/0:20,0:20:57.19:0,57,796	0/0:17,0:17:48.13:0,48,648	0/0:22,0:22:66.22:0,66,920	0/0:27,0:27:72.19:0,72,950	0/0:22,0:22:60.17:0,60,817	0/0:28,0:28:78.24:0,78,1073	0/0:8,0:8:24.08:0,24,335
chr10	86866497	.	A	AT	4376.06	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-11.534;DP=615;FS=26.206;HRun=8;HaplotypeScore=66.4239;InbreedingCoeff=0.9980;MQ=87.25;MQ0=0;MQRankSum=-3.879;QD=27.87;ReadPosRankSum=-0.411;VQSLOD=3.1208;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.02:0,90,817	0/0:9,0:9:21.01:0,21,192	0/0:23,0:23:42:0,42,380	0/0:20,0:20:24.85:0,25,351	0/0:31,0:31:81.04:0,81,741	0/0:17,0:17:51.03:0,51,467	0/0:17,0:17:42.02:0,42,384	1/1:9,27:36:81.21:915,81,0	0/0:22,0:22:57.03:0,57,522	0/0:19,0:19:51.03:0,51,466	0/0:16,0:16:39.01:0,39,357	0/0:24,0:24:63:0,63,567	0/0:25,0:25:72.04:0,72,659	0/0:24,0:24:60.02:0,60,549	0/0:18,0:18:42.01:0,42,384	0/0:14,0:14:33.01:0,33,302	0/0:30,0:30:90.03:0,90,818	0/0:36,0:36:87.04:0,87,796	1/1:2,20:22:60.18:693,60,0	1/1:1,22:23:66.20:761,66,0	1/1:1,16:18:47.97:534,48,0	0/0:15,0:15:39.01:0,39,357	0/0:18,0:18:45.01:0,45,412	0/0:23,0:23:66.04:0,66,604	0/0:24,0:24:63.03:0,63,576	1/1:4,19:23:29.70:594,30,0	1/1:4,19:24:57:638,57,0	1/1:2,9:11:21.06:242,21,0
chr10	86867317	.	CA	C	702.52	PASS	AB=0.851;AC=20;AF=0.476;AN=42;BaseQRankSum=5.311;DP=446;FS=0.000;HRun=16;HaplotypeScore=82.0951;InbreedingCoeff=0.1812;MQ=73.77;MQ0=2;MQRankSum=-0.608;QD=2.41;ReadPosRankSum=3.726;VQSLOD=-0.6380;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:13:6.55:31,7,0	1/1:2,6:10:18.70:101,19,0	0/1:33,0:21:6.56:7,0,32	0/0:25,0:16:10.47:0,10,61	0/0:24,2:27:14.34:0,14,311	0/0:14,1:20:10.64:0,11,193	0/1:19,4:23:9.12:9,0,249	./.	0/1:13,2:16:0.23:0,0,202	1/1:7,14:24:41.08:231,41,0	1/1:6,13:24:36.43:191,36,0	0/1:19,2:21:2.59:3,0,192	0/1:16,2:19:5.81:6,0,179	0/1:18,3:21:3.03:3,0,185	0/1:16,2:19:3.23:3,0,178	0/1:15,4:20:21.93:22,0,292	0/1:8,13:22:32.91:159,0,33	1/1:5,0:18:22.38:65,22,0	./.	./.	./.	0/0:19,2:22:20.97:0,21,299	0/0:26,2:28:15.20:0,15,325	0/1:6,2:8:21.05:21,0,59	0/0:28,1:32:50.69:0,51,512	./.	./.	./.
chr10	86867947	.	GGCGGAA	G	404.24	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.965;DP=710;FS=7.778;HRun=0;HaplotypeScore=161.5676;InbreedingCoeff=0.9346;MQ=89.20;MQ0=1;MQRankSum=-4.557;QD=13.94;ReadPosRankSum=-0.346;VQSLOD=2.4830;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,12:29:25.83:498,26,0	0/0:17,0:17:36.12:0,36,903	0/0:33,0:33:87.30:0,87,2879	0/0:25,0:25:68.96:0,69,2017	0/0:24,0:24:56.70:0,57,1410	0/0:22,0:22:57.62:0,58,1624	0/0:31,0:31:75.10:0,75,2111	0/0:30,0:30:69.20:0,69,2028	0/0:33,0:33:66.21:0,66,1848	0/0:27,0:27:57.15:0,57,1340	0/0:9,0:9:17.88:0,18,578	0/0:23,0:23:57.18:0,57,1661	0/0:29,0:29:63.21:0,63,1973	0/0:41,0:41:96.30:0,96,2907	0/0:41,0:41:99:0,105,3007	0/0:27,0:27:66.23:0,66,2027	0/0:31,0:31:65.59:0,66,1886	0/0:31,0:31:72.25:0,72,2148	0/0:19,0:19:48.16:0,48,1484	0/0:14,0:14:30.06:0,30,721	0/0:40,0:40:99:0,108,2440	0/0:16,0:16:33.11:0,33,987	0/0:13,0:13:36.04:0,36,831	0/0:36,0:36:84.29:0,84,2513	0/0:19,0:19:57.18:0,57,1378	0/0:15,0:14:27.08:0,27,479	0/0:29,0:29:57.19:0,57,1536	0/0:6,0:6:9.02:0,9,175
chr10	86869124	.	A	AGCACC	1177.57	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.625;DP=669;FS=0.000;HRun=0;HaplotypeScore=117.8646;InbreedingCoeff=0.9976;MQ=90.14;MQ0=0;MQRankSum=-2.314;QD=61.98;ReadPosRankSum=2.706;VQSLOD=4.5943;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,129,2528	0/0:8,0:8:24.08:0,24,487	0/0:26,0:26:57.11:0,57,1007	0/0:25,0:25:51.16:0,51,924	0/0:29,0:29:75.24:0,75,1450	0/0:20,0:20:51.17:0,51,1023	0/0:17,0:17:51.13:0,51,904	0/0:26,0:26:66.21:0,66,1218	0/0:24,0:24:72.23:0,72,1414	0/0:25,0:25:66.23:0,66,1333	0/0:15,0:15:45.15:0,45,886	0/0:26,0:26:72.25:0,72,1420	0/0:24,0:24:69.24:0,69,1379	0/0:21,0:21:54.19:0,54,1074	0/0:39,0:39:99:0,108,2162	0/0:23,0:23:63.22:0,63,1259	0/0:23,0:23:63.19:0,63,1217	1/1:4,15:19:42.14:1272,42,0	0/0:23,0:23:57.18:0,57,1054	0/0:17,0:17:45.15:0,45,902	0/0:47,0:47:99:0,129,2556	0/0:20,0:20:57.18:0,57,1121	0/0:18,0:18:48.16:0,48,974	0/0:28,0:28:72.25:0,72,1462	0/0:27,0:27:78.27:0,78,1584	0/0:26,0:26:75.26:0,75,1507	0/0:15,0:15:39.13:0,39,757	0/0:11,0:11:33.09:0,33,598
chr10	86869711	.	ATC	A	2113.13	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.135;DP=756;FS=8.435;HRun=0;HaplotypeScore=89.8653;InbreedingCoeff=0.9958;MQ=66.43;MQ0=0;MQRankSum=-1.225;QD=36.43;ReadPosRankSum=4.527;VQSLOD=5.7076;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:96.32:1375,96,0	0/0:7,0:7:18.06:0,18,330	0/0:31,0:30:81.32:0,81,1286	0/0:27,0:24:49.32:0,49,971	0/0:26,0:26:78.23:0,78,1367	0/0:13,0:13:39.12:0,39,668	0/0:21,0:21:60.19:0,60,1062	0/0:37,0:37:99:0,105,1833	0/0:27,0:27:81.26:0,81,1448	0/0:29,0:29:87.28:0,87,1538	0/0:28,0:28:84.29:0,84,1532	0/0:30,0:30:87.25:0,87,1497	0/0:30,0:30:87.28:0,87,1564	0/0:34,0:34:99:0,102,1801	0/0:26,0:26:78.24:0,78,1370	0/0:27,0:27:81.25:0,81,1425	0/0:33,0:33:96.33:0,96,1751	1/1:2,21:23:60.20:860,60,0	0/0:20,0:20:57.18:0,57,999	0/0:30,0:30:87.30:0,87,1572	0/0:34,0:34:99:0,99,1778	0/0:14,0:14:36.12:0,36,654	0/0:25,0:25:75.26:0,75,1373	0/0:26,0:26:72.25:0,72,1304	0/0:21,0:21:57.18:0,57,1001	0/0:41,0:41:99:0,120,2163	0/0:39,0:39:99:0,114,2026	0/0:22,0:22:66.20:0,66,1150
chr10	86870128	.	C	CT	2866.88	PASS	AB=0.900;AC=13;AF=0.232;AN=56;BaseQRankSum=-11.173;DP=610;FS=10.264;HRun=10;HaplotypeScore=78.4794;InbreedingCoeff=0.8825;MQ=66.52;MQ0=4;MQRankSum=0.070;QD=16.96;ReadPosRankSum=2.556;VQSLOD=3.7611;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:30:31.97:693,32,0	1/1:2,7:9:21.05:222,21,0	0/0:16,0:11:17.95:0,18,143	0/0:20,0:17:12.11:0,12,140	0/0:23,1:24:21.93:0,22,387	0/0:16,0:17:43.99:0,44,351	0/0:20,1:21:15.61:0,16,337	0/0:23,0:25:57.82:0,58,453	0/0:13,0:13:23.93:0,24,197	1/1:10,21:30:41.44:611,41,0	1/1:10,12:22:38.85:385,39,0	0/0:16,0:16:40.97:0,41,323	0/0:17,0:17:29.93:0,30,246	0/0:19,0:20:49.94:0,50,396	0/0:25,0:23:43.94:0,44,350	0/0:21,0:21:53.92:0,54,443	1/1:9,28:37:19.91:611,20,0	1/1:5,16:22:46.87:516,47,0	0/0:23,0:23:38.88:0,39,315	0/0:29,0:30:55.85:0,56,445	0/0:18,0:18:41.93:0,42,345	0/0:15,0:16:25.98:0,26,200	0/0:21,0:22:46.95:0,47,375	0/1:16,2:18:19.09:19,0,269	0/0:19,1:21:11.96:0,12,294	0/0:34,0:34:62.89:0,63,517	0/0:24,0:25:70.91:0,71,566	0/0:16,0:16:35.94:0,36,296
chr10	86875532	.	TA	T	8343.71	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=15.567;DP=616;FS=0.302;HRun=7;HaplotypeScore=57.9091;InbreedingCoeff=0.9987;MQ=77.00;MQ0=0;MQRankSum=-3.554;QD=27.72;ReadPosRankSum=0.317;VQSLOD=5.3505;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:81.18:826,81,0	1/1:0,15:15:45.10:459,45,0	0/0:14,0:14:24.06:0,24,277	0/0:13,0:13:25.77:0,26,317	0/0:32,0:32:84.27:0,84,1056	0/0:22,0:22:63.20:0,63,793	0/0:23,0:23:66.19:0,66,816	1/1:2,27:29:75.17:765,75,0	0/0:16,0:16:48.15:0,48,604	1/1:0,23:23:69.16:704,69,0	1/1:1,12:13:30.06:306,30,0	0/0:28,0:28:81.26:0,81,1018	0/0:13,0:13:39.12:0,39,490	0/0:22,0:22:60.18:0,60,744	0/0:26,0:26:72.22:0,72,896	0/0:21,0:21:63.20:0,63,792	1/1:2,35:37:96.21:980,96,0	1/1:2,22:24:66.15:673,66,0	1/1:1,19:20:57.09:571,57,0	1/1:0,18:18:54.12:551,54,0	1/1:0,19:19:48.11:490,48,0	0/0:18,0:18:51.16:0,51,641	0/0:20,0:20:57.17:0,57,706	0/0:25,2:27:20.03:0,20,882	0/0:20,0:20:57.18:0,57,717	1/1:4,31:35:93.21:948,93,0	1/1:2,26:28:72.16:735,72,0	1/1:0,11:11:33.07:336,33,0
chr10	86876208	.	T	TAAAAC	4022.08	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.351;DP=762;FS=11.689;HRun=0;HaplotypeScore=146.0065;InbreedingCoeff=0.9576;MQ=75.61;MQ0=7;MQRankSum=-2.358;QD=48.46;ReadPosRankSum=0.940;VQSLOD=3.5962;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:84.17:0,84,1497	1/1:4,2:6:6.02:170,6,0	0/0:37,0:27:17.69:0,18,361	0/0:35,0:24:14.29:0,14,369	0/0:36,0:36:60.21:0,60,1089	0/0:25,0:25:57.18:0,57,1000	0/0:29,0:29:45.15:0,45,825	0/0:38,0:38:33.10:0,33,571	0/0:26,0:26:51.16:0,51,892	1/1:11,13:25:42.14:1132,42,0	1/1:7,10:17:27.09:765,27,0	0/0:25,0:25:51.16:0,51,904	0/0:24,0:24:51.17:0,51,922	0/0:24,0:24:51.15:0,51,875	0/0:26,0:26:51.16:0,51,896	0/0:22,0:22:51.11:0,51,864	1/1:9,26:35:69.24:1954,69,0	0/0:29,0:29:39.10:0,39,681	0/0:29,0:29:33.10:0,33,599	0/0:22,0:22:33.10:0,33,573	0/0:31,0:31:48.15:0,48,835	0/0:27,0:27:51.15:0,51,875	0/0:21,0:21:38.15:0,38,637	0/0:30,0:30:66.15:0,66,1109	0/0:26,0:26:39.13:0,39,704	0/0:34,0:34:69.23:0,69,1237	0/0:30,0:31:78.24:0,78,1351	0/0:9,0:9:15.05:0,15,275
chr10	86877780	.	AACAC	A	2118.96	PASS	AB=0.949;AC=13;AF=0.232;AN=56;BaseQRankSum=5.659;DP=583;FS=11.507;HRun=0;HaplotypeScore=131.3723;InbreedingCoeff=0.2052;MQ=72.38;MQ0=4;MQRankSum=2.971;QD=10.92;ReadPosRankSum=-0.748;VQSLOD=2.5883;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:9.10:9,0,252	0/0:7,0:7:11.75:0,12,101	0/0:25,0:18:37.34:0,37,756	0/0:28,0:24:50.51:0,51,986	0/0:36,0:36:78.24:0,78,1779	0/0:17,0:17:39.13:0,39,974	0/0:14,0:14:36.12:0,36,839	1/1:10,16:24:48.09:669,48,0	0/0:23,0:23:60.18:0,60,1356	0/1:20,0:20:46.81:382,0,47	0/1:14,0:14:27.13:29,0,27	0/0:22,0:22:66.23:0,66,1640	0/0:21,0:21:60.21:0,60,1478	0/0:22,0:22:63.22:0,63,1559	0/0:24,0:24:69.24:0,69,1708	0/0:23,0:22:60.21:0,60,1522	0/1:16,1:17:99:159,0,152	0/0:19,0:19:46:0,46,653	0/1:12,9:20:99:277,0,207	0/1:19,0:19:33.82:178,0,34	1/1:17,1:18:8.32:233,8,0	0/0:26,0:27:72.01:0,72,1591	0/0:18,0:18:51.16:0,51,1197	0/0:30,0:30:78.09:0,78,1721	0/0:17,0:17:48.16:0,48,1145	0/1:21,0:21:81.66:324,0,82	0/0:8,0:15:7.37:0,7,84	1/1:4,0:4:0.31:17,0,0
chr10	86877787	.	A	ACT	2333.75	PASS	AB=0.902;AC=16;AF=0.286;AN=56;BaseQRankSum=8.834;DP=596;FS=10.966;HRun=0;HaplotypeScore=119.2704;InbreedingCoeff=0.3604;MQ=64.07;MQ0=6;MQRankSum=2.696;QD=11.61;ReadPosRankSum=-0.800;VQSLOD=2.4314;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:55.34:0,55,755	1/1:0,8:8:12.04:226,12,0	0/0:24,0:16:42.21:0,42,567	0/0:26,0:17:50.63:0,51,690	0/0:33,0:33:81.23:0,81,1173	0/0:17,0:17:42.13:0,42,620	0/0:13,0:13:39.12:0,39,574	1/1:25,0:23:7.42:358,7,0	0/0:23,0:23:60.13:0,60,808	1/1:3,19:22:0.32:470,0,0	1/1:6,11:16:2.21:108,2,0	0/0:27,0:27:78.21:0,78,1106	0/0:21,0:21:60.20:0,60,902	0/0:22,0:22:63.21:0,63,963	0/0:25,0:25:75.21:0,75,1082	0/0:22,0:21:63.19:0,63,919	0/1:16,4:20:6.18:372,0,6	0/0:21,0:21:57.01:0,57,706	0/1:18,0:17:76.76:160,0,77	0/1:19,0:19:8.37:132,0,8	0/1:19,1:19:21.12:170,0,21	0/0:25,0:25:72.11:0,72,981	0/0:19,0:19:51.12:0,51,732	0/0:31,0:31:77.63:0,78,1161	0/0:18,0:18:49.04:0,49,713	0/1:12,18:30:79.47:445,0,79	0/1:19,0:17:17.49:17,0,70	1/1:3,0:3:3.95:41,4,0
chr10	86877793	.	TCACA	T	531.95	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=3.827;DP=608;FS=8.728;HRun=0;HaplotypeScore=146.9488;InbreedingCoeff=0.4406;MQ=56.29;MQ0=7;MQRankSum=-2.159;QD=10.86;ReadPosRankSum=-0.505;VQSLOD=2.4783;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,7:28:35.45:523,35,0	0/0:8,0:8:15.03:0,15,227	0/0:23,0:12:14.72:0,15,196	0/0:28,0:13:30.91:0,31,322	0/0:28,0:28:69.21:0,69,1494	0/0:16,0:16:41.49:0,41,913	0/0:17,0:17:42.09:0,42,754	0/0:24,0:22:18.26:0,18,139	0/0:23,0:23:57.15:0,57,1284	0/0:21,0:21:12.93:0,13,407	0/0:19,0:18:3.68:0,4,102	0/0:28,0:28:78.24:0,78,1600	0/0:21,0:21:54.17:0,54,1130	0/0:23,0:23:63.22:0,63,1399	0/0:30,0:30:81.26:0,81,1808	0/0:26,0:25:74.84:0,75,1495	0/0:20,0:20:28.73:0,29,438	0/1:21,0:21:99:115,0,179	0/0:17,0:16:25:0,25,347	0/0:19,0:19:4.23:0,4,52	0/0:22,0:21:13.16:0,13,139	0/0:23,0:23:63.19:0,63,1337	0/0:18,0:18:45.15:0,45,1033	0/0:32,0:32:71.64:0,72,1396	0/0:19,0:19:51.16:0,51,1126	0/0:32,0:32:50.81:0,51,661	0/0:18,0:16:12.51:0,13,164	0/0:4,0:4:2.36:0,2,18
chr10	86877807	.	TCACACA	T	299.58	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=3.641;DP=643;FS=5.395;HRun=0;HaplotypeScore=165.9984;InbreedingCoeff=0.5552;MQ=52.27;MQ0=18;MQRankSum=-2.553;QD=6.51;ReadPosRankSum=-2.002;VQSLOD=1.8866;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,5:25:18.49:388,18,0	0/0:6,0:6:15.03:0,15,315	0/0:26,0:5:1.55:0,2,4	0/0:43,0:15:14.30:0,14,133	0/0:29,0:29:72.19:0,72,1684	0/0:18,0:18:45.14:0,45,1112	0/0:15,0:15:39.13:0,39,1047	0/0:25,0:24:38.36:0,38,388	0/0:25,0:26:72.23:0,72,1924	0/1:21,0:21:9.38:9,0,562	0/0:22,0:21:18.38:0,18,235	0/0:25,0:26:66.21:0,66,1811	0/0:22,0:24:51.16:0,51,1363	0/0:23,0:23:51.16:0,51,1429	0/0:29,0:29:78.27:0,78,2376	0/0:26,0:26:69.22:0,69,1884	0/0:21,0:21:29.34:0,29,629	0/0:22,0:22:52.61:0,53,814	0/0:11,0:10:27.04:0,27,497	0/0:18,0:18:9.10:0,9,105	0/0:24,0:22:20.80:0,21,277	0/0:24,0:25:54.18:0,54,1375	0/0:21,0:21:48.15:0,48,1334	0/0:34,0:34:60.19:0,60,1510	0/0:18,0:19:51.17:0,51,1487	0/0:36,0:35:63.45:0,63,964	0/0:18,0:16:17.79:0,18,220	0/0:7,0:7:6.46:0,6,53
chr10	86878327	.	G	GA	1538.93	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-10.353;DP=587;FS=12.668;HRun=6;HaplotypeScore=85.9664;InbreedingCoeff=0.9754;MQ=80.55;MQ0=0;MQRankSum=-3.365;QD=32.74;ReadPosRankSum=-1.345;VQSLOD=2.2385;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:75.24:944,75,0	0/0:4,0:4:12.03:0,12,122	0/0:16,0:16:42.09:0,42,426	0/0:19,0:19:41.92:0,42,400	0/0:22,0:22:60.13:0,60,612	0/0:24,0:24:69.15:0,69,704	0/0:13,0:13:36.08:0,36,367	0/0:19,0:19:57.11:0,57,571	0/0:14,0:14:36.08:0,36,367	0/0:36,0:36:99:0,99,1010	0/0:21,0:21:63.10:0,63,631	0/0:22,0:22:60.13:0,60,607	0/0:25,0:25:69.16:0,69,704	0/0:16,0:16:45.10:0,45,459	0/0:17,0:17:51.12:0,51,520	0/0:21,0:21:60.13:0,60,612	0/0:31,0:31:90.20:0,90,918	1/1:0,19:19:57.18:717,57,0	0/0:16,0:16:42.09:0,42,428	0/0:25,0:25:69.15:0,69,701	0/0:17,0:17:30.06:0,30,306	0/0:9,0:9:27.06:0,27,276	0/0:13,0:13:36.08:0,36,367	0/0:7,0:7:15.03:0,15,153	0/0:25,0:25:69.13:0,69,696	0/0:50,0:50:99:0,138,1402	0/0:34,0:34:84.19:0,84,857	0/0:24,0:24:54.12:0,54,551
chr10	86878370	.	ATAT	A	6798.91	PASS	AB=0.567;AC=13;AF=0.232;AN=56;BaseQRankSum=12.842;DP=533;FS=9.302;HRun=0;HaplotypeScore=88.5698;InbreedingCoeff=0.8322;MQ=66.63;MQ0=0;MQRankSum=-2.616;QD=34.34;ReadPosRankSum=-0.626;VQSLOD=5.0120;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.33:0,96,2024	0/0:9,0:9:27.09:0,27,583	0/0:4,0:4:3.01:0,3,62	0/0:8,0:8:12.46:0,12,188	0/0:28,0:28:84.25:0,84,1722	0/0:24,0:24:63.22:0,63,1306	0/0:10,0:10:24.06:0,24,441	1/1:3,32:35:93.14:1264,93,0	0/0:13,0:13:36.12:0,36,779	0/0:26,0:26:66.20:0,66,1306	0/0:19,0:19:51.15:0,51,996	0/0:18,0:18:45.14:0,45,901	0/0:13,0:13:36.12:0,36,729	0/0:14,0:14:42.14:0,42,895	0/0:12,0:12:27.09:0,27,570	0/0:18,0:18:48.14:0,48,907	0/0:37,0:37:99:0,99,1999	0/0:16,0:16:48.16:0,48,993	1/1:2,13:15:42.09:586,42,0	1/1:0,27:27:78.15:1103,78,0	1/1:0,16:16:30.10:456,30,0	0/0:4,0:4:9.03:0,9,179	0/0:7,0:7:15.03:0,15,283	0/0:2,0:2:6.02:0,6,130	0/0:21,0:21:63.22:0,63,1294	0/1:12,39:51:99:1667,0,189	1/1:2,34:36:84.07:1253,84,0	1/1:3,15:18:30.10:469,30,0
chr10	86879113	.	CTT	C	5149.78	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=2.749;DP=606;FS=2.510;HRun=11;HaplotypeScore=83.9910;InbreedingCoeff=0.9873;MQ=70.72;MQ0=1;MQRankSum=-1.072;QD=23.41;ReadPosRankSum=2.042;VQSLOD=4.8740;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:37:93.22:990,93,0	0/0:3,0:15:29.94:0,30,103	0/0:12,0:9:11.87:0,12,146	0/0:12,0:12:13.81:0,14,144	0/0:31,0:33:65.66:0,66,933	0/0:25,0:26:57.12:0,57,811	0/0:19,0:20:40.59:0,41,617	1/1:15,18:33:48.02:558,48,0	0/0:12,0:12:30.07:0,30,437	0/0:6,0:32:63.05:0,63,229	0/0:8,1:30:14:0,14,148	0/0:21,0:22:51.17:0,51,767	0/0:27,0:27:60.17:0,60,881	0/0:15,0:15:39.12:0,39,578	0/0:11,0:11:21.03:0,21,297	0/0:9,0:9:27.07:0,27,374	0/0:7,0:41:83.87:0,84,373	1/1:5,18:23:30.91:493,31,0	1/1:3,12:15:35.82:363,36,0	1/1:2,26:29:66.04:743,66,0	1/1:6,10:16:27.05:287,27,0	0/0:10,0:11:33.09:0,33,485	0/0:14,0:14:33.57:0,34,488	0/0:26,0:26:69.19:0,69,980	0/0:18,0:18:42.13:0,42,626	1/1:2,22:25:60.09:694,60,0	1/1:5,24:29:63.14:671,63,0	1/1:0,12:12:33.08:351,33,0
chr10	86880799	.	ACG	A	741.53	PASS	AB=0.994;AC=15;AF=0.268;AN=56;BaseQRankSum=6.044;DP=615;FS=6.795;HRun=0;HaplotypeScore=118.3318;InbreedingCoeff=0.0047;MQ=54.76;MQ0=15;MQRankSum=-3.964;QD=3.08;ReadPosRankSum=-4.538;VQSLOD=0.3416;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:8.55:74,9,0	0/1:5,0:5:8.92:19,0,9	0/1:14,0:4:2.43:2,0,34	0/0:22,0:9:10:0,10,128	0/0:17,0:17:41.94:0,42,637	0/0:10,0:10:28.92:0,29,310	0/0:31,0:31:86.94:0,87,1134	0/1:34,1:33:51.78:201,0,52	0/0:27,0:26:66.03:0,66,993	0/1:20,0:20:99:137,0,141	1/1:8,1:9:3:25,3,0	0/0:27,0:27:78.15:0,78,1250	0/0:23,0:23:59.34:0,59,842	0/0:24,0:23:63.03:0,63,946	0/0:33,0:33:93.06:0,93,1434	0/0:29,0:29:78.03:0,78,1208	0/1:24,0:22:92.97:93,0,112	0/1:10,0:9:25.14:25,0,63	0/1:17,0:15:25.20:25,0,70	0/0:11,0:11:0:0,0,0	0/1:48,2:47:76.58:103,0,77	0/0:21,0:20:47.17:0,47,772	0/0:17,0:17:44.81:0,45,586	0/0:54,0:54:99:0,135,2524	0/0:28,0:28:59.93:0,60,876	0/1:18,0:17:53:151,0,53	0/1:13,0:13:1.07:1,0,43	0/1:3,0:3:13.59:38,0,14
chr10	86880813	.	ACG	A	1257.60	PASS	AB=0.914;AC=17;AF=0.304;AN=56;BaseQRankSum=11.173;DP=665;FS=10.649;HRun=0;HaplotypeScore=122.4904;InbreedingCoeff=0.0761;MQ=48.99;MQ0=20;MQRankSum=-6.217;QD=4.07;ReadPosRankSum=-2.068;VQSLOD=1.5766;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:11.49:92,11,0	1/1:8,0:8:2.76:61,3,0	1/1:15,0:1:2.04:6,2,0	0/1:21,0:7:10.58:57,0,11	0/0:21,0:21:19.06:0,19,599	0/0:8,0:8:8.72:0,9,192	0/0:27,0:26:50.33:0,50,923	0/1:15,25:38:48.81:432,0,49	0/0:25,0:25:34.61:0,35,709	0/1:26,0:26:46.82:170,0,47	1/1:13,0:13:5.45:24,5,0	0/0:32,0:32:56.10:0,56,1107	0/0:20,0:20:3.67:0,4,594	0/0:21,0:20:56.19:0,56,639	0/0:31,0:31:38.50:0,38,1007	0/0:30,0:30:61.33:0,61,1029	0/1:28,0:26:21.50:127,0,22	0/1:13,0:12:39.64:40,0,84	0/1:16,10:24:99:253,0,141	0/0:15,0:15:5.49:0,5,24	0/1:54,3:54:87.66:88,0,99	0/0:21,0:20:40.27:0,40,650	0/0:18,0:18:33:0,33,656	0/0:56,0:56:45.88:0,46,1578	0/0:29,0:29:15.79:0,16,856	0/1:13,0:11:37.69:38,0,103	0/1:15,1:16:32.71:33,0,46	0/0:2,0:1:3:0,3,25
chr10	86880815	.	GCA	G	863.54	PASS	AB=0.929;AC=19;AF=0.352;AN=54;BaseQRankSum=6.708;DP=671;FS=0.000;HRun=0;HaplotypeScore=125.0658;InbreedingCoeff=-0.2365;MQ=48.83;MQ0=21;MQRankSum=-1.468;QD=1.99;ReadPosRankSum=-0.860;VQSLOD=1.9851;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:1.95:0,2,23	1/1:8,0:8:10.27:99,10,0	./.	0/0:22,0:7:0:0,0,0	0/1:20,0:20:33.31:33,0,432	0/1:8,1:9:16.79:17,0,180	0/0:27,0:26:19.87:0,20,750	0/1:42,0:40:28.23:64,0,28	0/1:24,3:26:24.52:25,0,534	0/1:25,0:25:88.66:104,0,89	1/1:13,0:13:5.99:69,6,0	0/0:30,5:35:2.62:0,3,918	0/1:17,2:19:32.97:33,0,433	0/0:21,0:20:30.10:0,30,461	0/1:26,5:31:73.01:73,0,762	0/0:29,1:31:9.11:0,9,720	0/1:28,0:26:2.44:101,0,2	0/0:13,0:12:9.03:0,9,107	0/1:27,0:26:84.87:85,0,85	0/0:16,0:16:5.49:0,5,24	0/1:37,0:52:13.21:27,0,13	0/1:18,2:19:1.71:2,0,435	0/0:16,2:18:10.32:0,10,596	0/1:48,6:54:99:179,0,1024	0/1:23,4:28:87.10:87,0,719	0/1:13,0:11:12.77:13,0,27	0/1:15,0:15:1.64:2,0,7	0/0:2,0:1:2.97:0,3,20
chr10	86880823	.	A	ACACACACGCACG	3637.63	PASS	AB=0.905;AC=17;AF=0.315;AN=54;BaseQRankSum=3.735;DP=687;FS=0.934;HRun=0;HaplotypeScore=242.0882;InbreedingCoeff=0.5411;MQ=49.03;MQ0=25;MQRankSum=-7.253;QD=13.47;ReadPosRankSum=-5.237;VQSLOD=1.5155;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:8.44:0,8,82	0/1:8,0:8:1.11:1,0,92	./.	0/0:21,0:7:14.94:0,15,178	0/0:22,0:22:45.12:0,45,1213	0/0:7,0:7:18.06:0,18,424	0/0:27,0:26:63.16:0,63,1790	1/1:45,0:43:68.04:1540,68,0	0/0:26,0:25:57.16:0,57,1553	0/1:29,0:29:7.63:8,0,488	0/0:14,0:14:8.92:0,9,91	0/0:35,0:35:84.27:0,84,2373	0/0:19,0:19:48.08:0,48,1311	0/0:20,0:19:54.11:0,54,1278	0/0:28,0:28:75.22:0,75,2162	0/0:29,0:29:66.68:0,67,1935	0/1:30,0:28:97.08:97,0,271	0/1:13,0:12:99:115,0,119	1/1:30,0:28:3.63:870,4,0	0/1:2,13:20:0.03:0,0,1	1/1:57,0:54:1.92:371,2,0	0/0:21,0:20:45.14:0,45,1313	0/0:18,0:18:44.45:0,44,1336	0/0:53,0:53:99:0,135,3682	0/0:28,0:28:78.24:0,78,2258	1/1:7,5:16:24.14:473,24,0	1/1:5,10:16:5.20:41,5,0	1/1:4,0:3:9.03:121,9,0
chr10	86881425	.	T	TAGCC	12796.54	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-13.009;DP=792;FS=7.946;HRun=0;HaplotypeScore=124.2462;InbreedingCoeff=0.9999;MQ=84.43;MQ0=0;MQRankSum=-7.063;QD=64.96;ReadPosRankSum=-1.801;VQSLOD=5.9101;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,2695	0/0:11,0:11:30.10:0,30,582	0/0:29,0:29:74.84:0,75,1338	0/0:31,0:31:84.28:0,84,1562	0/0:26,0:26:78.25:0,78,1478	0/0:17,0:17:48.16:0,48,911	0/0:22,0:22:66.21:0,66,1228	1/1:9,20:32:90.23:2147,90,0	0/0:38,0:38:99:0,114,2188	0/0:34,0:34:90.29:0,90,1661	0/0:20,0:20:60.19:0,60,1125	0/0:33,0:33:96.32:0,96,1828	0/0:30,0:30:87.28:0,87,1581	0/0:40,0:40:99:0,114,2210	0/0:39,0:39:99:0,117,2168	0/0:37,0:37:99:0,102,1918	0/0:21,0:21:63.22:0,63,1211	0/0:23,0:23:66.20:0,66,1230	1/1:5,21:28:78.27:1986,78,0	1/1:3,24:28:72.20:1850,72,0	1/1:5,28:34:75.21:1946,75,0	0/0:31,0:31:81.26:0,81,1500	0/0:27,0:27:66.20:0,66,1226	0/0:16,0:16:45.11:0,45,834	0/0:21,0:21:60.21:0,60,1156	1/1:7,27:35:46.12:2401,46,0	1/1:3,19:27:63.22:1625,63,0	1/1:2,9:11:33.07:841,33,0
chr10	86881868	.	T	TG	1065.50	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=12.159;DP=560;FS=3.716;HRun=1;HaplotypeScore=71.3022;InbreedingCoeff=0.2527;MQ=68.47;MQ0=0;MQRankSum=-1.799;QD=7.35;ReadPosRankSum=3.350;VQSLOD=1.1566;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,1:23:62.26:608,62,0	0/0:11,0:11:33.05:0,33,368	0/0:13,0:13:39:0,39,407	0/1:15,0:14:8.55:9,0,112	0/0:20,0:20:60.13:0,60,703	0/0:21,0:21:53.43:0,53,640	0/0:18,0:18:48.11:0,48,564	0/1:24,0:24:8.73:9,0,168	0/0:22,0:22:63.17:0,63,771	0/0:33,0:33:86.76:0,87,1061	0/0:19,0:19:54.13:0,54,642	0/0:22,0:22:66.19:0,66,820	0/0:15,0:15:45.10:0,45,545	0/0:24,0:24:72.23:0,72,917	0/0:21,0:21:60.18:0,60,750	0/0:17,0:17:48.10:0,48,553	0/0:34,0:34:99:0,99,1164	1/1:3,11:14:34:493,34,0	0/0:14,0:14:2.94:0,3,160	0/1:20,0:20:32.14:32,0,75	0/1:16,0:16:21.36:21,0,86	0/0:15,0:15:35.45:0,35,469	0/0:19,0:19:57.13:0,57,680	0/0:15,0:15:45.09:0,45,522	0/0:30,0:30:78.09:0,78,893	0/0:32,0:32:2.90:0,3,287	0/1:22,0:22:37.86:38,0,71	0/1:10,0:10:7.05:7,0,98
chr10	86881869	.	G	GA	2871.41	PASS	AB=0.814;AC=16;AF=0.286;AN=56;BaseQRankSum=-4.393;DP=576;FS=3.894;HRun=11;HaplotypeScore=70.5003;InbreedingCoeff=0.6223;MQ=68.99;MQ0=0;MQRankSum=0.254;QD=14.36;ReadPosRankSum=-0.534;VQSLOD=3.9445;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:24:51.34:314,51,0	0/0:11,0:11:20.86:0,21,162	0/1:14,0:14:1.85:2,0,68	0/0:15,0:14:2.71:0,3,83	0/0:22,0:22:44.78:0,45,346	0/0:18,1:22:17.32:0,17,289	0/0:18,0:18:43.85:0,44,326	1/1:5,20:28:19.11:492,19,0	0/0:22,0:22:53.75:0,54,418	0/0:31,1:33:46.23:0,46,532	0/0:18,0:19:43.85:0,44,331	0/0:21,0:22:61.81:0,62,470	0/0:15,0:15:38.85:0,39,302	0/0:26,0:26:68.71:0,69,534	0/0:21,0:21:59.75:0,60,462	0/0:17,0:17:38.82:0,39,300	0/0:33,0:34:79.70:0,80,609	0/1:14,0:14:7.87:177,0,8	0/1:8,8:16:13.42:236,0,13	1/1:4,18:22:27.82:453,28,0	1/1:4,12:16:9.83:281,10,0	0/0:14,2:16:8.36:0,8,248	0/0:18,0:19:46.85:0,47,354	0/0:15,0:15:32.83:0,33,255	0/0:25,0:28:63.01:0,63,457	1/1:11,22:34:18.57:561,19,0	1/1:3,19:22:4.63:410,5,0	0/1:3,7:10:45.66:128,0,46
chr10	86885732	.	CT	C	8191.82	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=14.727;DP=626;FS=0.965;HRun=7;HaplotypeScore=68.4493;InbreedingCoeff=0.9327;MQ=81.86;MQ0=0;MQRankSum=-3.887;QD=25.92;ReadPosRankSum=1.959;VQSLOD=5.5380;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,32:37:96.21:979,96,0	1/1:0,8:8:24.05:245,24,0	0/0:22,0:22:40.31:0,40,569	0/1:18,0:18:11.63:12,0,254	0/0:26,0:26:72.23:0,72,906	0/0:26,0:26:72.21:0,72,892	0/0:31,0:31:81.25:0,81,1006	1/1:2,17:19:51.11:520,51,0	0/0:26,0:27:81.09:0,81,996	1/1:2,22:24:63.11:629,63,0	1/1:1,15:16:45.10:459,45,0	0/0:16,0:16:48.15:0,48,604	0/0:20,0:20:57.17:0,57,704	0/0:14,0:14:39.11:0,39,477	0/0:25,0:25:72.23:0,72,906	0/0:21,0:21:54.17:0,54,679	1/1:2,34:36:93.21:949,93,0	1/1:0,20:20:54.12:551,54,0	1/1:2,21:23:63.12:635,63,0	1/1:1,25:26:75.17:765,75,0	1/1:1,24:25:63.14:642,63,0	0/0:27,0:27:75.20:0,75,926	0/0:20,0:20:57.13:0,57,686	0/0:20,0:20:54.16:0,54,665	0/0:15,0:15:42.13:0,42,528	1/1:0,21:21:63.14:643,63,0	1/1:2,28:30:81.18:826,81,0	1/1:0,13:13:33.08:337,33,0
chr10	86887442	.	GAA	G	4854.32	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.368;DP=635;FS=7.083;HRun=10;HaplotypeScore=75.9740;InbreedingCoeff=0.9839;MQ=72.75;MQ0=1;MQRankSum=-0.596;QD=27.27;ReadPosRankSum=0.289;VQSLOD=4.6837;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,132,2024	0/0:9,0:9:24.07:0,24,360	0/0:13,0:13:27.09:0,27,391	0/0:10,0:10:8.42:0,8,298	0/0:23,0:23:66.19:0,66,980	0/0:18,0:20:54.18:0,54,836	0/0:22,0:22:56.68:0,57,866	1/1:3,33:36:93.22:1018,93,0	0/0:25,0:25:66.23:0,66,1046	0/0:28,0:29:75.25:0,75,1172	0/0:20,0:20:48.16:0,48,750	0/0:18,0:18:36.12:0,36,568	0/0:22,0:23:56.67:0,57,845	0/0:18,0:18:36.12:0,36,568	0/0:20,0:20:57.18:0,57,881	0/0:23,0:25:68.12:0,68,924	0/0:38,0:40:99:0,111,1743	0/0:20,0:20:57.19:0,57,905	1/1:1,15:16:45.09:476,45,0	1/1:2,25:27:66.16:732,66,0	1/1:4,27:30:75.18:836,75,0	0/0:21,0:21:51.16:0,51,782	0/0:14,0:14:33.11:0,33,524	0/0:22,0:23:65.70:0,66,987	0/0:12,0:14:35.59:0,36,469	1/1:4,22:26:21.56:688,22,0	1/1:3,31:34:84.21:936,84,0	1/1:1,7:8:15.04:167,15,0
chr10	86887865	.	TTG	T	2232.48	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=6.614;DP=713;FS=2.066;HRun=0;HaplotypeScore=111.4054;InbreedingCoeff=0.7262;MQ=57.82;MQ0=16;MQRankSum=4.680;QD=17.31;ReadPosRankSum=2.703;VQSLOD=3.9276;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:34:50.44:0,50,435	1/1:2,8:10:24.07:284,24,0	0/0:60,0:26:39.32:0,39,521	0/0:61,1:29:5.16:0,5,467	0/0:25,2:27:18.63:0,19,744	0/0:21,0:21:28.23:0,28,567	0/0:22,0:22:36.09:0,36,523	0/0:14,0:12:8.80:0,9,54	0/1:19,0:19:11.19:11,0,559	1/1:10,22:32:68.35:763,68,0	1/1:3,22:25:65.85:695,66,0	0/0:21,0:21:47.83:0,48,723	0/0:27,0:27:66.20:0,66,1021	0/0:26,0:26:44.85:0,45,790	0/0:32,0:32:84.26:0,84,1306	0/0:25,0:25:60.17:0,60,896	1/1:2,21:23:54.17:640,54,0	0/0:26,0:26:57.08:0,57,824	0/0:12,0:8:5.80:0,6,33	0/0:18,0:28:20.73:0,21,165	0/1:18,0:17:0:0,0,0	0/0:17,0:17:45.15:0,45,692	0/0:27,2:30:7.03:0,7,951	0/0:23,0:25:57.98:0,58,884	0/0:23,3:25:24.64:0,25,838	0/0:18,0:17:41.02:0,41,269	0/0:10,0:22:5.95:0,6,45	0/0:7,0:6:5.70:0,6,31
chr10	86888159	.	C	CACAA	9985.24	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.050;DP=693;FS=22.763;HRun=0;HaplotypeScore=117.8004;InbreedingCoeff=0.9920;MQ=86.93;MQ0=2;MQRankSum=-8.303;QD=55.17;ReadPosRankSum=-1.368;VQSLOD=3.8582;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.27:0,90,1641	0/0:6,0:6:18.03:0,18,293	0/0:30,0:30:84.20:0,84,1372	0/0:24,0:24:55.76:0,56,1047	0/0:14,0:14:42.10:0,42,706	0/0:23,0:23:66.15:0,66,1119	0/0:20,0:20:60.21:0,60,1132	1/1:8,25:37:96.23:2040,96,0	0/0:24,0:24:72.22:0,72,1293	0/0:32,0:32:93.29:0,93,1595	0/0:18,0:18:54.15:0,54,919	0/0:37,0:37:92.59:0,93,1550	0/0:27,0:27:78.25:0,78,1447	0/0:20,0:20:57.18:0,57,1041	0/0:34,0:34:96.29:0,96,1754	0/0:32,0:32:93.31:0,93,1733	0/0:37,0:37:99:0,105,1789	0/0:18,0:18:51.14:0,51,892	1/1:5,12:18:48.01:940,48,0	1/1:1,10:11:21.03:504,21,0	1/1:7,30:38:81.06:1874,81,0	0/0:14,0:14:33.09:0,33,562	0/0:8,0:8:15.05:0,15,262	0/0:32,0:32:93.24:0,93,1594	0/0:30,0:30:84.25:0,84,1469	1/1:6,26:34:90.13:2039,90,0	1/1:2,32:33:81.28:2183,81,0	1/1:0,7:7:15.05:405,15,0
chr10	86888602	.	C	CT	157.28	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-3.138;DP=482;FS=10.561;HRun=0;HaplotypeScore=174.9076;InbreedingCoeff=0.6014;MQ=65.47;MQ0=0;MQRankSum=-1.231;QD=4.91;ReadPosRankSum=-3.414;VQSLOD=1.6204;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:48.07:0,48,340	0/0:3,0:3:5.78:0,6,31	0/0:11,0:11:20.38:0,20,287	0/0:7,0:7:17.05:0,17,169	0/0:17,0:17:45.07:0,45,517	0/0:22,0:22:63.17:0,63,746	0/0:23,0:23:54.16:0,54,657	0/1:23,0:23:1.03:1,0,118	0/0:13,0:13:36.06:0,36,427	0/0:15,0:15:34.42:0,34,144	0/0:12,0:11:28.33:0,28,143	0/0:22,0:22:63.14:0,63,739	0/0:15,0:15:45.03:0,45,508	0/0:14,0:14:39.07:0,39,464	0/0:31,0:31:90.23:0,90,1068	0/0:24,0:24:60.15:0,60,699	0/0:22,0:22:12.06:0,12,227	1/1:2,7:9:20.58:249,21,0	0/0:16,0:15:9.40:0,9,122	0/0:12,0:12:23.87:0,24,126	0/0:25,0:25:10.23:0,10,230	0/0:13,0:13:36.11:0,36,445	0/0:12,0:12:35.89:0,36,389	0/0:14,0:14:39.09:0,39,456	0/0:19,0:19:57.12:0,57,675	0/0:18,0:18:8.09:0,8,128	0/0:23,0:23:44.97:0,45,236	0/0:15,0:15:36.82:0,37,206
chr10	86888753	.	G	GAAAGA	3469.09	PASS	AB=0.981;AC=24;AF=0.444;AN=54;BaseQRankSum=7.175;DP=673;FS=0.494;HRun=0;HaplotypeScore=136.2605;InbreedingCoeff=0.6973;MQ=46.69;MQ0=45;MQRankSum=-8.865;QD=10.71;ReadPosRankSum=0.139;VQSLOD=2.6452;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,10:26:10.91:362,11,0	1/1:2,0:2:3.01:70,3,0	0/0:101,0:14:3:0,3,40	0/1:113,0:18:2:2,0,98	0/0:44,0:43:93.14:0,93,1483	0/0:17,0:17:38.15:0,38,665	0/0:17,0:17:26.09:0,26,492	1/1:27,0:25:18.65:476,19,0	0/0:13,0:13:13.84:0,14,156	0/1:24,0:22:8.13:206,0,8	1/1:14,0:14:9.70:170,10,0	0/0:17,0:15:32.92:0,33,492	0/0:12,0:12:18.02:0,18,278	0/0:15,0:13:25.12:0,25,367	0/0:23,0:22:47.63:0,48,810	0/0:17,0:15:41.91:0,42,641	0/1:16,0:14:0.23:64,0,0	0/1:11,1:11:23.92:183,0,24	1/1:13,0:13:18.35:219,18,0	1/1:21,1:23:29.11:464,29,0	1/1:7,0:5:11.85:110,12,0	0/0:17,0:16:27.08:0,27,435	0/0:19,0:18:39.07:0,39,569	./.	0/0:31,0:31:80.09:0,80,1230	1/1:13,2:15:21.49:398,21,0	1/1:15,2:14:21.54:448,22,0	1/1:13,1:14:13.77:297,14,0
chr10	86888757	.	G	GAAAAGAAAAGA	5030.92	PASS	AB=0.853;AC=22;AF=0.393;AN=56;BaseQRankSum=5.770;DP=668;FS=1.505;HRun=0;HaplotypeScore=191.4841;InbreedingCoeff=0.6186;MQ=45.99;MQ0=44;MQRankSum=-8.432;QD=22.46;ReadPosRankSum=0.182;VQSLOD=4.2859;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:8.43:111,0,8	1/1:0,2:2:3.01:167,3,0	0/0:89,0:9:1.17:0,1,37	0/0:107,0:16:13.19:0,13,120	0/0:42,0:42:96.26:0,96,2385	0/0:16,0:16:39.17:0,39,1151	0/0:17,0:18:27.35:0,27,781	1/1:29,0:27:18.08:514,18,0	0/0:11,0:11:18.04:0,18,302	0/1:17,1:23:8.96:989,0,9	1/1:5,9:19:7.73:478,8,0	0/0:18,0:16:36.06:0,36,856	0/0:12,0:11:18.05:0,18,470	0/0:15,0:13:26.11:0,26,673	0/0:23,0:22:51.15:0,51,1378	0/0:18,0:16:47.98:0,48,1040	0/1:10,7:19:10.91:347,0,11	0/1:13,0:12:99:159,0,111	1/1:14,0:13:19.51:304,20,0	1/1:20,0:21:23.97:508,24,0	1/1:7,0:6:12.01:132,12,0	0/0:17,0:16:27.09:0,27,723	0/0:18,0:17:39.11:0,39,941	0/0:3,0:3:3.01:0,3,34	0/0:31,0:31:80.97:0,81,1959	1/1:16,0:16:31.03:476,31,0	1/1:18,0:15:26.09:540,26,0	1/1:14,0:14:14.91:306,15,0
chr10	86888762	.	GA	G	492.39	PASS	AB=0.847;AC=8;AF=0.143;AN=56;BaseQRankSum=5.276;DP=629;FS=10.077;HRun=5;HaplotypeScore=98.2045;InbreedingCoeff=-0.1650;MQ=49.15;MQ0=41;MQRankSum=-6.604;QD=4.21;ReadPosRankSum=-0.011;VQSLOD=-0.3363;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:18.06:0,18,169	0/0:2,0:2:2.50:0,2,9	0/0:83,0:6:11.33:0,11,91	0/0:106,1:19:18.75:0,19,201	0/0:41,0:41:99:0,105,1296	0/0:17,0:17:44.94:0,45,567	0/0:16,0:16:20.40:0,20,418	0/1:23,6:27:95.31:229,0,95	0/0:8,0:8:16.60:0,17,202	0/0:23,1:22:42.85:0,43,384	0/0:20,0:20:19.42:0,19,210	0/0:17,0:16:44.77:0,45,543	0/0:10,0:9:17.92:0,18,215	0/0:13,0:11:23.44:0,23,292	0/0:21,0:20:54.13:0,54,695	0/0:19,0:17:47.89:0,48,581	0/0:22,0:20:15.05:0,15,120	0/1:11,2:12:69.42:69,0,150	0/1:8,3:10:38.61:84,0,39	0/1:16,2:18:28.38:92,0,28	0/1:7,1:6:31.34:31,0,46	0/0:16,0:15:30.09:0,30,394	0/0:17,0:16:39.12:0,39,511	0/0:4,0:4:6.01:0,6,66	0/0:31,0:31:82.53:0,83,975	0/1:13,5:18:65.15:65,0,121	0/1:11,0:10:9.89:10,0,91	0/1:5,3:8:31.86:46,0,32
chr10	86888768	.	G	GAAA	2412.96	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=8.766;DP=620;FS=6.905;HRun=10;HaplotypeScore=108.8704;InbreedingCoeff=0.4898;MQ=54.52;MQ0=33;MQRankSum=-8.704;QD=11.28;ReadPosRankSum=0.691;VQSLOD=0.7669;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:58.84:59,0,126	1/1:2,0:2:2.97:20,3,0	0/0:77,0:8:2.78:0,3,28	0/0:104,1:22:11.75:0,12,158	0/0:41,0:42:86.80:0,87,1015	0/0:17,0:17:23.05:0,23,452	0/0:15,0:16:35.91:0,36,387	1/1:17,7:22:34.83:464,35,0	0/1:8,0:8:2.93:3,0,97	0/1:23,0:21:30:30,0,91	0/1:19,0:19:38.30:38,0,120	0/0:18,0:17:41.30:0,41,460	0/0:8,0:8:17.96:0,18,188	0/0:11,0:10:18.02:0,18,197	0/0:21,0:20:51.98:0,52,591	0/0:19,0:18:46.06:0,46,471	0/1:22,0:21:28.90:29,0,162	0/1:13,0:12:43.87:44,0,88	1/1:7,3:9:17.25:228,17,0	1/1:9,9:21:25.40:380,25,0	1/1:7,1:7:11.21:138,11,0	0/0:14,0:13:27.01:0,27,304	0/0:16,0:15:13.39:0,13,342	0/0:4,0:4:5.96:0,6,73	0/0:31,0:31:56.61:0,57,693	1/1:10,7:18:38.33:542,38,0	1/1:2,9:10:24.08:430,24,0	1/1:4,6:13:16.66:204,17,0
chr10	86888888	.	A	ATTTT	2506.08	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=2.783;DP=469;FS=0.000;HRun=11;HaplotypeScore=89.2203;InbreedingCoeff=0.9339;MQ=66.60;MQ0=1;MQRankSum=-7.792;QD=27.54;ReadPosRankSum=-3.682;VQSLOD=1.5091;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:42:93.15:0,93,1237	0/0:2,0:2:6.02:0,6,82	0/0:16,0:12:13.34:0,13,125	0/0:17,0:13:11.23:0,11,112	0/0:14,0:15:29.91:0,30,384	0/0:20,0:21:49.29:0,49,641	0/0:20,0:23:49.94:0,50,641	1/1:12,7:20:27.09:530,27,0	0/0:20,0:20:38.85:0,39,514	0/0:15,0:15:32.97:0,33,449	0/0:10,0:11:13.11:0,13,166	0/0:19,0:19:44.96:0,45,591	0/0:18,0:21:41.95:0,42,519	0/0:22,0:24:51:0,51,657	0/0:9,0:9:11.92:0,12,147	0/0:13,0:11:33.04:0,33,430	0/0:26,0:27:32.37:0,32,856	0/0:32,0:34:83.99:0,84,1067	1/1:6,1:8:9.03:176,9,0	1/1:6,5:10:21.07:359,21,0	1/1:5,5:10:15.79:241,16,0	0/0:10,0:10:14.93:0,15,180	0/0:8,0:8:14.74:0,15,198	0/0:13,0:15:45.09:0,45,560	0/0:15,0:15:23.94:0,24,318	1/1:4,9:13:24.08:525,24,0	1/1:4,7:10:12.04:276,12,0	1/1:8,8:16:27.09:591,27,0
chr10	86892069	.	TA	T	634.39	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.061;DP=554;FS=1.487;HRun=10;HaplotypeScore=54.5632;InbreedingCoeff=0.9314;MQ=72.18;MQ0=0;MQRankSum=-2.708;QD=19.82;ReadPosRankSum=1.515;VQSLOD=4.5838;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:83.98:729,84,0	0/0:6,0:6:15.04:0,15,166	0/0:13,0:13:22.75:0,23,200	0/0:11,0:11:12.03:0,12,133	0/0:19,0:19:48.13:0,48,531	0/0:24,1:25:43.12:0,43,695	0/0:22,0:22:54.13:0,54,589	0/0:21,0:21:57.15:0,57,631	0/0:26,0:26:63.11:0,63,668	0/0:23,1:24:25.21:0,25,499	0/0:17,0:17:39.09:0,39,423	0/0:18,0:18:45.12:0,45,494	0/0:19,0:19:48.11:0,48,517	0/0:25,0:25:68.75:0,69,714	0/0:20,0:20:54.08:0,54,551	0/0:23,0:23:57.15:0,57,623	0/0:28,0:28:69.18:0,69,755	0/0:6,0:6:18.05:0,18,199	0/0:15,0:15:42.10:0,42,450	0/0:28,0:28:72.19:0,72,796	0/0:24,0:24:63.16:0,63,688	0/0:23,0:23:57.15:0,57,624	0/0:16,0:16:39.10:0,39,424	0/0:21,0:21:54.13:0,54,586	0/0:16,1:17:19.07:0,19,439	0/0:23,0:23:57.15:0,57,631	0/0:26,0:26:66.17:0,66,722	0/0:6,0:6:18.04:0,18,191
chr10	86892478	.	G	GTT	2339.56	PASS	AB=0.867;AC=28;AF=0.500;AN=56;BaseQRankSum=5.432;DP=554;FS=1.338;HRun=14;HaplotypeScore=86.5724;InbreedingCoeff=0.6326;MQ=66.05;MQ0=3;MQRankSum=-1.792;QD=6.59;ReadPosRankSum=-1.283;VQSLOD=0.4896;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:26:26.94:114,27,0	1/1:3,0:5:8.37:71,8,0	0/1:30,0:20:3.67:4,0,39	0/0:21,0:14:27.92:0,28,184	0/0:20,0:22:38.59:0,39,357	0/1:23,1:25:4.38:4,0,216	0/0:15,0:15:6.50:0,7,198	1/1:6,4:25:54.56:489,55,0	0/0:11,0:14:1.86:0,2,129	1/1:10,1:23:32.82:171,33,0	0/1:7,1:27:5.42:164,0,5	0/0:15,0:15:16.48:0,16,148	0/0:14,0:18:31.77:0,32,258	0/0:14,0:15:17.78:0,18,192	0/0:12,0:12:23.80:0,24,192	0/0:15,0:17:32.14:0,32,287	1/1:6,1:30:22.18:169,22,0	1/1:10,1:29:0.74:131,1,0	1/1:9,0:19:33.12:260,33,0	1/1:7,1:26:31.44:251,31,0	1/1:5,0:5:2.99:24,3,0	0/0:12,0:13:17.85:0,18,192	0/0:17,0:18:32.79:0,33,254	0/0:17,0:15:26.30:0,26,198	0/1:24,0:28:22.48:22,0,284	1/1:10,1:29:56.50:502,56,0	1/1:8,1:17:14.99:134,15,0	1/1:2,0:6:3:28,3,0
chr10	86892731	.	G	GT	2216.09	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.606;DP=598;FS=0.000;HRun=1;HaplotypeScore=58.9024;InbreedingCoeff=0.9876;MQ=86.21;MQ0=0;MQRankSum=-3.619;QD=39.57;ReadPosRankSum=-0.244;VQSLOD=3.8773;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,43:43:99:1753,117,0	0/0:5,0:5:15.05:0,15,195	0/0:19,0:19:45.96:0,46,620	0/0:25,0:25:66.20:0,66,824	0/0:29,0:29:87.28:0,87,1128	0/0:15,0:15:45.13:0,45,568	0/0:22,0:22:63.20:0,63,817	0/0:33,0:33:87.27:0,87,1116	0/0:28,0:28:84.27:0,84,1091	0/0:21,0:21:60.19:0,60,778	0/0:21,0:21:60.17:0,60,753	0/0:13,0:13:39.11:0,39,492	0/0:21,0:21:60.18:0,60,765	0/0:27,0:27:81.25:0,81,1038	0/0:23,0:23:66.21:0,66,854	0/0:15,0:15:45.15:0,45,583	0/0:28,0:28:81.22:0,81,1031	1/1:0,13:13:39.13:584,39,0	0/0:14,0:14:35.92:0,36,467	0/0:22,0:22:66.19:0,66,828	0/0:38,0:38:99:0,111,1440	0/0:13,0:13:39.13:0,39,506	0/0:22,0:22:60.19:0,60,778	0/0:30,0:30:84.27:0,84,1091	0/0:15,0:15:42.14:0,42,545	0/0:17,0:17:51.17:0,51,662	0/0:20,0:20:57.18:0,57,738	0/0:6,0:6:18.06:0,18,234
chr10	86892868	.	A	ATT	6664.04	PASS	AB=0.583;AC=25;AF=0.446;AN=56;BaseQRankSum=-5.982;DP=498;FS=6.951;HRun=9;HaplotypeScore=61.7965;InbreedingCoeff=0.9465;MQ=79.24;MQ0=0;MQRankSum=-2.982;QD=27.77;ReadPosRankSum=-0.451;VQSLOD=4.3960;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,34:39:94.87:1436,95,0	1/1:0,0:6:14.97:51,15,0	0/0:21,0:20:39.04:0,39,403	0/0:16,0:16:27.25:0,27,282	0/0:16,0:16:39.09:0,39,415	0/0:17,0:17:45.10:0,45,479	0/0:22,0:22:57.11:0,57,598	1/1:7,28:37:89.74:1241,90,0	0/0:22,0:22:54.09:0,54,565	0/1:4,0:14:3.47:64,0,3	1/1:1,0:15:27.95:105,28,0	0/0:14,0:14:36.07:0,36,375	0/0:8,0:8:21.04:0,21,223	0/0:15,0:15:40.58:0,41,444	0/0:20,0:20:45.06:0,45,479	0/0:19,0:19:57.12:0,57,598	1/1:2,0:23:49.91:171,50,0	1/1:3,10:14:32.51:441,33,0	1/1:1,14:15:42.12:619,42,0	1/1:1,14:16:35.61:517,36,0	1/1:3,16:20:41.63:609,42,0	0/0:19,0:19:57.14:0,57,607	0/0:12,0:12:36.09:0,36,382	0/0:15,0:16:36.04:0,36,438	0/0:20,0:20:54.11:0,54,565	1/1:2,13:17:41.08:529,41,0	1/1:2,14:17:38.45:559,38,0	1/1:0,7:7:21.07:323,21,0
chr10	86892984	.	G	GA	2383.33	PASS	AB=0.750;AC=14;AF=0.250;AN=56;BaseQRankSum=-8.690;DP=516;FS=0.441;HRun=10;HaplotypeScore=52.4769;InbreedingCoeff=0.7274;MQ=61.53;MQ0=2;MQRankSum=0.890;QD=15.89;ReadPosRankSum=-2.747;VQSLOD=3.0145;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:42:56.62:0,57,624	0/0:10,0:10:23.96:0,24,197	0/0:5,0:5:11.88:0,12,89	0/0:2,0:2:2.92:0,3,17	0/0:25,0:27:60.96:0,61,479	0/0:24,0:25:64.94:0,65,523	0/0:16,0:18:34:0,34,253	1/1:6,15:21:1.83:422,2,0	0/1:8,1:9:14.03:14,0,105	0/0:22,0:22:53.91:0,54,442	0/0:27,0:27:68.88:0,69,566	0/0:20,0:20:38.88:0,39,316	0/0:9,0:10:26.01:0,26,203	0/0:12,1:13:26.94:0,27,221	0/0:18,0:19:37.95:0,38,298	0/0:15,0:15:23.94:0,24,197	0/0:22,0:22:53.91:0,54,443	0/0:21,0:21:50.89:0,51,413	1/1:5,15:20:23.32:395,23,0	0/1:8,16:24:1.25:376,0,1	1/1:8,11:18:5.43:263,5,0	0/0:25,0:25:65.90:0,66,539	0/0:22,0:21:44.90:0,45,366	0/0:8,0:8:11.11:0,11,97	0/0:13,0:13:29.93:0,30,242	1/1:8,19:27:26.44:469,26,0	1/1:4,12:17:5.29:233,5,0	1/1:1,12:13:36.09:384,36,0
chr10	86894359	.	TA	T	5068.21	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=16.824;DP=569;FS=0.350;HRun=4;HaplotypeScore=74.3118;InbreedingCoeff=0.9942;MQ=86.80;MQ0=0;MQRankSum=-1.267;QD=32.49;ReadPosRankSum=-0.459;VQSLOD=5.0680;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.25:0,81,1112	0/0:4,0:4:12.04:0,12,167	0/0:24,0:24:59:0,59,767	0/0:14,0:14:36.04:0,36,435	0/0:19,0:19:57.16:0,57,764	0/0:26,0:26:72.23:0,72,993	0/0:15,0:15:42.14:0,42,588	1/1:1,34:35:99:1184,105,0	0/0:20,0:20:57.18:0,57,781	0/0:23,0:23:66.17:0,66,874	0/0:23,0:23:63.20:0,63,867	0/0:20,0:20:60.20:0,60,839	0/0:24,0:24:69.22:0,69,949	0/0:21,0:21:60.17:0,60,799	0/0:20,0:20:57.17:0,57,766	0/0:22,0:22:54.17:0,54,740	0/0:21,0:21:60.19:0,60,821	0/0:10,0:10:30.10:0,30,419	1/1:0,10:10:30.09:360,30,0	1/1:1,30:31:83.93:934,84,0	1/1:0,15:15:42.13:503,42,0	0/0:25,0:25:69.23:0,69,965	0/0:20,0:20:57.17:0,57,766	0/0:18,0:18:51.17:0,51,713	0/0:17,0:17:51.16:0,51,698	1/1:4,20:24:60.18:721,60,0	1/1:2,22:24:66.20:791,66,0	1/1:0,17:17:48.15:576,48,0
chr10	86894945	.	T	TTC	13404.04	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-10.177;DP=543;FS=10.655;HRun=0;HaplotypeScore=67.5810;InbreedingCoeff=0.9987;MQ=76.68;MQ0=2;MQRankSum=-5.651;QD=48.74;ReadPosRankSum=-0.904;VQSLOD=5.0801;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:81.27:1482,81,0	1/1:0,8:8:21.07:384,21,0	0/0:21,0:18:41.90:0,42,544	0/0:22,0:17:21.15:0,21,394	0/0:29,0:29:81.25:0,81,1200	0/0:17,0:17:48.15:0,48,696	0/0:16,0:16:47.18:0,47,675	1/1:2,29:31:90.31:1621,90,0	0/0:17,0:17:48.15:0,48,714	1/1:1,22:24:65.94:1133,66,0	1/1:0,17:18:39.12:711,39,0	0/0:16,0:16:48.14:0,48,694	0/0:18,0:18:51.11:0,51,734	0/0:12,0:12:36.12:0,36,550	0/0:26,0:26:72.23:0,72,1064	0/0:15,0:15:42.14:0,42,641	1/1:0,22:22:51.17:933,51,0	1/1:0,14:14:39.13:712,39,0	1/1:3,29:32:96.27:1597,96,0	1/1:3,17:20:60.19:1030,60,0	1/1:0,16:16:42.06:768,42,0	0/0:9,0:9:27.07:0,27,373	0/0:23,0:23:66.21:0,66,972	0/0:14,0:14:39.12:0,39,576	0/0:13,0:13:39.12:0,39,577	1/1:3,12:15:42.13:735,42,0	1/1:5,19:22:69.20:1198,69,0	1/1:0,20:20:60.21:1098,60,0
chr10	86894986	.	C	CT	2516.44	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.822;DP=559;FS=7.910;HRun=10;HaplotypeScore=81.5518;InbreedingCoeff=0.8478;MQ=68.77;MQ0=3;MQRankSum=-6.088;QD=15.34;ReadPosRankSum=-1.562;VQSLOD=3.2337;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:91.91:0,92,744	0/0:7,0:7:14.98:0,15,122	0/1:33,0:18:11.12:11,0,99	0/0:24,0:13:7.60:0,8,56	0/0:34,0:36:96.92:0,97,769	0/0:13,1:14:8.22:0,8,267	0/0:12,0:12:32.96:0,33,271	1/1:20,11:31:16.26:528,16,0	0/0:13,0:13:35.95:0,36,295	0/0:23,0:23:53.91:0,54,443	0/0:23,0:23:62.92:0,63,517	0/0:18,0:20:48.77:0,49,376	0/0:19,0:19:47.93:0,48,394	0/0:15,0:15:29.93:0,30,246	0/0:26,0:26:68.91:0,69,567	0/0:14,0:15:37.98:0,38,298	0/0:27,0:27:62.87:0,63,512	0/0:19,0:19:44.86:0,45,369	1/1:10,10:20:36.09:383,36,0	1/1:3,15:18:23.47:426,23,0	1/1:7,7:14:5.39:250,5,0	0/0:9,0:9:20.97:0,21,172	0/0:20,0:20:49.96:0,50,399	0/0:17,0:18:46.98:0,47,375	0/0:17,0:18:38.34:0,38,314	1/1:2,14:16:42.07:436,42,0	1/1:7,13:19:7.49:450,7,0	1/1:6,5:11:21.05:223,21,0
chr10	86895646	.	T	TG	699.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.696;DP=831;FS=6.584;HRun=8;HaplotypeScore=105.1100;InbreedingCoeff=0.9552;MQ=81.16;MQ0=0;MQRankSum=-2.172;QD=24.98;ReadPosRankSum=0.831;VQSLOD=3.5275;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,120,1085	0/0:5,0:5:12:0,12,110	0/0:30,0:29:50.85:0,51,514	0/0:30,0:30:61.28:0,61,515	0/0:29,0:29:72.02:0,72,657	0/0:20,0:20:51.02:0,51,467	0/0:36,0:35:89.78:0,90,823	0/0:39,0:39:89.68:0,90,810	0/0:34,0:34:87.03:0,87,796	0/0:36,0:36:72.02:0,72,658	0/0:25,0:25:66.03:0,66,604	0/0:40,1:41:82.44:0,82,1008	0/0:28,0:28:72.02:0,72,654	0/0:35,0:36:85.58:0,86,768	0/0:36,0:36:99:0,99,899	0/0:39,0:39:99:0,102,923	0/0:34,0:34:96.05:0,96,878	1/1:1,27:28:69.20:794,69,0	0/0:26,0:26:59.84:0,60,536	0/0:30,0:30:83.85:0,84,748	0/0:40,0:40:99:0,117,994	0/0:17,0:17:41.92:0,42,373	0/0:33,0:33:90.01:0,90,814	0/0:22,0:22:60.03:0,60,549	0/0:18,0:18:45.01:0,45,407	0/0:32,0:32:80.71:0,81,717	0/0:36,0:35:86.95:0,87,787	0/0:5,0:5:15.01:0,15,137
chr10	86896612	.	G	GA	3429.96	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.969;DP=460;FS=9.385;HRun=1;HaplotypeScore=62.8908;InbreedingCoeff=0.9507;MQ=56.21;MQ0=9;MQRankSum=-8.715;QD=32.98;ReadPosRankSum=-2.623;VQSLOD=1.6810;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.28:0,84,1174	0/0:11,0:11:33.11:0,33,458	0/0:17,0:8:21.06:0,21,281	0/0:25,0:9:17.30:0,17,287	0/0:24,0:23:63.21:0,63,881	0/0:18,0:18:54.18:0,54,754	0/0:17,0:17:48.16:0,48,667	1/1:1,24:19:57.19:909,57,0	0/0:13,0:13:39.13:0,39,545	0/0:21,0:21:60.20:0,60,837	0/0:20,0:20:60.20:0,60,839	0/0:15,0:15:42.12:0,42,569	0/0:14,0:14:42.14:0,42,587	0/0:12,0:12:33.11:0,33,462	0/0:11,0:11:30.10:0,30,418	0/0:10,0:10:30.10:0,30,418	0/0:27,0:28:78.26:0,78,1088	0/0:23,0:21:60.20:0,60,839	1/1:3,10:10:30.10:470,30,0	1/1:0,15:14:36.12:573,36,0	1/1:0,3:3:3.01:48,3,0	0/0:5,0:5:15.05:0,15,210	0/0:15,0:15:45.15:0,45,629	0/0:18,0:18:51.17:0,51,711	0/0:9,0:9:27.09:0,27,378	1/1:1,18:18:54.16:828,54,0	1/1:4,17:19:30.10:458,30,0	1/1:0,8:8:9.03:144,9,0
chr10	86896805	.	GAA	G	3149.02	PASS	AB=0.798;AC=15;AF=0.268;AN=56;BaseQRankSum=5.306;DP=500;FS=6.725;HRun=12;HaplotypeScore=68.8618;InbreedingCoeff=0.7556;MQ=70.60;MQ0=2;MQRankSum=0.735;QD=17.21;ReadPosRankSum=1.041;VQSLOD=2.5483;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:28:63.88:0,64,302	0/0:7,0:7:21.06:0,21,296	0/0:22,0:11:23.48:0,23,247	0/1:15,1:10:25.67:27,0,26	0/0:24,0:28:68.70:0,69,930	0/0:22,0:22:51.15:0,51,694	0/0:16,0:19:46.61:0,47,590	1/1:11,21:32:36.92:589,37,0	0/0:11,0:12:30.05:0,30,393	0/0:17,0:21:43.08:0,43,480	0/0:16,0:16:38.14:0,38,500	0/0:5,0:5:12.51:0,13,180	0/1:10,1:12:0.92:1,0,338	0/0:19,0:20:47.63:0,48,640	0/0:13,0:13:30.10:0,30,443	0/0:10,0:12:33.06:0,33,402	0/0:19,0:19:36.11:0,36,510	0/0:19,0:22:62.63:0,63,817	1/1:2,15:17:45.05:448,45,0	1/1:1,21:22:54.08:547,54,0	1/1:3,18:21:51.10:519,51,0	0/0:9,0:9:24.08:0,24,358	0/0:11,0:12:26.58:0,27,366	0/0:19,0:19:53.66:0,54,747	0/0:8,0:10:24.04:0,24,300	0/1:9,19:28:26.26:516,0,26	1/1:6,9:14:18.01:183,18,0	1/1:0,19:20:44.83:510,45,0
chr10	86899161	.	GGTGTGT	G	56.31	PASS	AC=4;AF=0.091;AN=44;BaseQRankSum=3.248;DP=356;FS=2.078;HRun=0;HaplotypeScore=85.9557;InbreedingCoeff=0.4944;MQ=63.60;MQ0=20;MQRankSum=-2.957;QD=1.34;ReadPosRankSum=0.446;VQSLOD=1.6027;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:25:3:26,3,0	./.	./.	./.	0/0:6,0:6:6.02:0,6,129	0/0:13,0:13:11.85:0,12,337	0/0:11,0:9:12.04:0,12,328	0/0:16,0:15:3.01:0,3,54	0/0:13,0:13:18.06:0,18,502	0/0:7,0:7:0.89:0,1,2	./.	0/0:17,0:15:21.96:0,22,569	0/0:6,0:7:15.05:0,15,384	0/0:14,0:14:15.05:0,15,366	0/0:9,0:10:18.06:0,18,458	0/0:7,0:7:9.03:0,9,290	./.	1/1:11,0:14:9.03:126,9,0	0/0:13,0:12:6.49:0,6,97	./.	0/0:23,0:18:3.01:0,3,62	0/0:8,0:8:9.02:0,9,218	0/0:6,0:5:6.02:0,6,187	0/0:18,0:16:12.04:0,12,319	0/0:12,0:12:15.03:0,15,433	0/0:20,0:18:30.10:0,30,645	0/0:15,0:16:17.88:0,18,346	0/0:12,0:13:5.98:0,6,91
chr10	86899207	.	T	TGTGTGC	865.08	PASS	AB=0.895;AC=17;AF=0.354;AN=48;BaseQRankSum=2.416;DP=316;FS=21.880;HRun=0;HaplotypeScore=171.7946;InbreedingCoeff=0.6547;MQ=38.19;MQ0=22;MQRankSum=-6.410;QD=6.18;ReadPosRankSum=1.010;VQSLOD=1.3289;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:12:7.05:41,7,0	./.	./.	0/0:3,0:1:1.25:0,1,3	0/0:5,0:5:6:0,6,61	0/0:15,0:15:10.24:0,10,148	0/0:19,0:17:22.31:0,22,303	1/1:15,0:12:20.38:107,20,0	0/0:17,0:17:21.53:0,22,362	0/1:11,0:10:2.05:68,0,2	./.	0/0:20,0:18:7.06:0,7,341	0/0:10,0:10:17.99:0,18,288	0/0:11,0:11:14.98:0,15,166	0/0:12,0:12:21.04:0,21,302	0/0:10,0:10:9.50:0,10,222	1/1:14,0:14:11.12:53,11,0	0/1:7,0:11:30.14:30,0,42	1/1:10,0:9:19.97:124,20,0	./.	0/1:16,0:11:0:1,0,0	0/0:7,0:7:6.02:0,6,141	0/0:3,0:2:6.02:0,6,81	0/0:15,0:13:6.02:0,6,123	0/0:15,0:15:17.99:0,18,269	1/1:18,0:17:36.32:310,36,0	1/1:6,13:20:12.86:256,13,0	1/1:6,0:5:8.65:46,9,0
chr10	86899333	.	T	TG	902.78	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.108;DP=328;FS=8.859;HRun=4;HaplotypeScore=88.9784;InbreedingCoeff=0.9307;MQ=79.58;MQ0=0;MQRankSum=-0.878;QD=30.09;ReadPosRankSum=0.797;VQSLOD=3.4096;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:36.03:450,36,0	0/0:4,0:4:12.03:0,12,136	0/0:11,0:11:27.08:0,27,306	0/0:10,0:10:30.07:0,30,326	0/0:13,0:13:39.11:0,39,441	0/0:7,0:7:15.04:0,15,170	0/0:18,0:18:48.10:0,48,529	0/0:21,0:21:57.09:0,57,607	0/0:14,0:14:42.12:0,42,474	0/0:12,0:12:36.10:0,36,407	0/0:10,0:10:27.08:0,27,306	0/0:13,0:13:36.10:0,36,408	0/0:6,0:6:18.04:0,18,195	0/0:9,0:9:27.08:0,27,304	0/0:10,0:10:30.09:0,30,340	0/0:9,0:9:24.07:0,24,272	0/0:16,0:16:39.11:0,39,442	1/1:0,16:16:42.14:574,42,0	0/0:8,0:8:15.02:0,15,159	0/0:11,0:11:30.09:0,30,340	0/0:5,0:5:12.03:0,12,136	0/0:11,0:11:27.08:0,27,306	0/0:5,0:5:12.02:0,12,126	0/0:14,0:14:36.10:0,36,408	0/0:10,0:10:24.07:0,24,272	0/0:16,0:16:39.11:0,39,442	0/0:14,0:14:42.12:0,42,476	0/0:21,0:21:51.15:0,51,578
chr10	86901862	.	TA	T	598.16	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.199;DP=696;FS=6.254;HRun=1;HaplotypeScore=64.7263;InbreedingCoeff=0.9970;MQ=87.60;MQ0=0;MQRankSum=-2.168;QD=33.23;ReadPosRankSum=-0.491;VQSLOD=2.8296;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1527	0/0:10,0:10:27.09:0,27,432	0/0:28,0:28:77.49:0,77,1193	0/0:25,0:24:72.21:0,72,1050	0/0:20,0:20:57.19:0,57,911	0/0:16,0:16:48.16:0,48,765	0/0:29,0:29:87.30:0,87,1381	0/0:28,0:28:84.28:0,84,1322	0/0:25,0:25:75.24:0,75,1171	0/0:23,0:23:69.24:0,69,1102	0/0:23,0:23:66.23:0,66,1051	0/0:29,0:29:87.30:0,87,1389	0/0:20,0:20:60.20:0,60,959	0/0:30,0:30:87.28:0,87,1368	0/0:32,0:32:96.31:0,96,1509	0/0:31,0:31:93.30:0,93,1464	0/0:25,0:25:75.26:0,75,1199	1/1:0,18:18:51.14:693,51,0	0/0:23,0:23:69.24:0,69,1100	0/0:16,0:16:48.16:0,48,765	0/0:53,0:54:99:0,162,2535	0/0:28,0:28:75.21:0,75,1150	0/0:25,0:25:72.23:0,72,1124	0/0:25,0:25:75.20:0,75,1127	0/0:21,0:21:60.20:0,60,959	0/0:25,0:25:72.25:0,72,1145	0/0:26,0:26:78.27:0,78,1246	0/0:8,0:8:24.08:0,24,384
chr10	86902113	.	A	AT	2184.31	PASS	AB=0.737;AC=16;AF=0.286;AN=56;BaseQRankSum=2.813;DP=548;FS=3.731;HRun=13;HaplotypeScore=78.1470;InbreedingCoeff=0.5513;MQ=62.20;MQ0=3;MQRankSum=-0.108;QD=10.92;ReadPosRankSum=-0.773;VQSLOD=3.2177;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,20:33:23.39:389,23,0	0/0:11,0:12:28.81:0,29,191	0/0:8,0:6:4.49:0,4,25	0/1:10,0:7:10.98:11,0,15	0/0:20,1:24:19.84:0,20,256	0/0:21,1:24:32.75:0,33,353	0/0:15,0:15:29.60:0,30,203	1/1:16,14:33:13.11:373,13,0	0/0:7,0:8:16.86:0,17,109	0/0:21,0:21:41.54:0,42,287	0/0:20,1:24:7.76:0,8,183	0/0:23,0:24:45.58:0,46,300	0/0:12,0:12:29.72:0,30,205	0/0:13,0:16:29.83:0,30,181	0/0:16,0:16:21.75:0,22,134	0/0:17,1:19:0.86:0,1,142	0/0:30,1:34:46.25:0,46,441	0/1:8,7:16:4.96:214,0,5	1/1:7,12:19:3.62:286,4,0	0/1:6,8:15:5.43:202,0,5	1/1:3,7:11:6.44:199,6,0	0/0:22,0:26:52.71:0,53,332	0/0:16,0:18:38.82:0,39,244	0/0:20,1:23:17.89:0,18,251	0/0:20,1:22:15.76:0,16,242	1/1:8,13:23:41.55:325,42,0	0/1:11,12:23:46.27:187,0,46	1/1:5,10:15:3.44:175,3,0
chr10	86903561	.	CT	C	1289.38	PASS	AB=0.690;AC=13;AF=0.250;AN=52;BaseQRankSum=2.412;DP=269;FS=0.713;HRun=8;HaplotypeScore=37.5932;InbreedingCoeff=0.7216;MQ=48.10;MQ0=23;MQRankSum=-3.938;QD=13.86;ReadPosRankSum=1.825;VQSLOD=2.5717;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:27.03:0,27,299	0/0:6,0:6:15.05:0,15,181	./.	./.	0/0:14,0:14:30.01:0,30,324	0/0:9,0:9:9.03:0,9,109	0/0:5,0:5:6.02:0,6,72	0/1:8,9:12:11.13:193,0,11	0/0:3,0:3:9.02:0,9,99	0/0:8,0:7:15.05:0,15,181	0/0:12,0:12:33.10:0,33,398	0/0:5,0:5:15.04:0,15,171	0/0:5,0:5:12.04:0,12,145	0/0:6,0:6:18:0,18,191	0/0:10,0:9:21.03:0,21,222	0/0:13,0:13:36.10:0,36,423	0/0:17,0:14:27.02:0,27,309	0/0:7,0:5:3.01:0,3,36	1/1:3,10:10:27.04:260,27,0	1/1:2,2:3:6.01:58,6,0	1/1:3,3:4:9:87,9,0	0/0:5,0:4:3.01:0,3,36	0/0:7,0:7:12.04:0,12,145	0/0:5,0:5:0.44:0,0,1	0/0:7,0:7:12.03:0,12,135	1/1:3,17:17:45.06:430,45,0	1/1:6,14:18:26.79:260,27,0	1/1:3,7:9:18.03:174,18,0
chr10	86905836	.	TA	T	3461.18	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.684;DP=418;FS=0.860;HRun=8;HaplotypeScore=40.3590;InbreedingCoeff=0.9536;MQ=71.52;MQ0=0;MQRankSum=-2.130;QD=24.72;ReadPosRankSum=-1.486;VQSLOD=3.4454;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.23:0,75,905	0/0:9,0:9:21.06:0,21,254	0/0:9,0:10:26.28:0,26,273	0/0:6,0:5:12.01:0,12,118	0/0:22,0:22:63.19:0,63,761	0/0:23,0:23:57.17:0,57,689	0/0:10,0:10:27.04:0,27,310	1/1:3,26:29:78.11:746,78,0	0/0:6,0:6:18.06:0,18,217	0/0:17,0:17:48.15:0,48,580	0/0:15,0:15:45.14:0,45,544	0/0:11,0:11:30.09:0,30,362	0/0:18,0:18:54.17:0,54,652	0/0:12,0:12:33.10:0,33,399	0/0:6,0:6:18.06:0,18,217	0/0:12,0:12:36.11:0,36,435	0/0:26,0:26:72.22:0,72,870	0/0:9,0:9:21.06:0,21,254	1/1:9,12:21:36.05:348,36,0	1/1:0,25:25:72.11:695,72,0	1/1:0,6:6:15.02:145,15,0	0/0:8,0:8:24.07:0,24,288	0/0:11,0:11:33.10:0,33,399	0/0:1,0:1:3.01:0,3,36	0/0:20,0:20:57.17:0,57,689	1/1:1,17:18:17.84:456,18,0	1/1:1,23:24:62.99:608,63,0	1/1:0,17:17:48.08:464,48,0
chr10	86906402	.	C	CGTGT	1918.56	PASS	AB=0.974;AC=30;AF=0.577;AN=52;BaseQRankSum=-2.382;DP=534;FS=4.320;HRun=0;HaplotypeScore=109.7324;InbreedingCoeff=0.1796;MQ=68.62;MQ0=6;MQRankSum=0.586;QD=5.16;ReadPosRankSum=-0.983;VQSLOD=1.3616;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:21.05:319,21,0	1/1:4,5:9:3.01:70,3,0	./.	./.	0/1:26,0:26:32.67:33,0,36	0/1:27,0:29:58.66:65,0,59	0/0:19,0:19:2.77:0,3,22	1/1:21,0:20:5.92:39,6,0	0/0:9,0:9:6.01:0,6,91	1/1:17,0:17:6.91:95,7,0	1/1:19,0:19:18.05:254,18,0	0/0:12,0:13:6.01:0,6,71	0/1:16,0:16:29.84:30,0,121	0/0:9,0:9:3.01:0,3,35	0/1:20,0:20:8.07:8,0,156	0/0:17,0:17:10.33:0,10,93	0/1:22,5:29:13.12:175,0,13	0/1:15,0:16:5.96:6,0,42	1/1:28,0:28:16.80:172,17,0	1/1:17,0:17:9:108,9,0	1/1:26,0:26:13.61:202,14,0	0/1:11,0:11:14.98:15,0,40	0/1:9,0:9:13.33:13,0,37	0/0:17,0:16:6:0,6,68	0/0:18,0:18:2.04:0,2,6	1/1:27,0:27:12.03:154,12,0	1/1:11,0:11:8.76:102,9,0	1/1:12,0:12:15.02:225,15,0
chr10	86906840	.	C	CG	12281.94	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-17.959;DP=714;FS=21.404;HRun=2;HaplotypeScore=63.1755;InbreedingCoeff=0.9987;MQ=87.47;MQ0=0;MQRankSum=-5.130;QD=37.22;ReadPosRankSum=0.175;VQSLOD=2.8201;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,46:49:99:1922,118,0	1/1:0,7:7:18.06:259,18,0	0/0:30,0:30:54.07:0,54,893	0/0:31,0:30:58.70:0,59,905	0/0:27,0:27:78.25:0,78,966	0/0:33,0:33:96.28:0,96,1175	0/0:18,0:18:48.13:0,48,581	1/1:5,39:44:99:1627,117,0	0/0:27,0:27:81.25:0,81,1000	1/1:1,27:28:81.27:1165,81,0	1/1:2,17:19:45.15:646,45,0	0/0:35,0:35:96.27:0,96,1164	0/0:23,0:23:69.17:0,69,836	0/0:20,0:20:57.18:0,57,706	0/0:38,0:38:99:0,108,1326	0/0:26,0:26:78.25:0,78,967	1/1:1,26:27:69.23:993,69,0	1/1:0,10:10:27.09:388,27,0	1/1:1,20:21:57.14:747,57,0	1/1:0,23:23:63.21:906,63,0	1/1:3,29:32:81.27:1165,81,0	0/0:19,0:19:51.16:0,51,632	0/0:17,0:17:48.04:0,48,545	0/0:25,0:25:69.22:0,69,854	0/0:15,0:15:45.13:0,45,545	1/1:2,25:27:72.21:997,72,0	1/1:3,29:31:72.24:1035,72,0	1/1:0,11:11:30.10:431,30,0
chr10	86908294	.	G	GT	2266.58	PASS	AB=0.856;AC=19;AF=0.339;AN=56;BaseQRankSum=-2.000;DP=526;FS=1.818;HRun=13;HaplotypeScore=55.4095;InbreedingCoeff=0.7741;MQ=68.75;MQ0=1;MQRankSum=0.809;QD=10.26;ReadPosRankSum=-2.922;VQSLOD=2.1405;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,1:14:17.15:90,17,0	0/0:11,0:12:31.79:0,32,211	0/1:22,0:11:0.97:25,0,1	0/0:14,0:10:6.20:0,6,31	0/0:32,0:32:53.75:0,54,489	0/0:22,0:26:59.60:0,60,387	0/0:8,0:10:19.88:0,20,129	1/1:12,13:26:47.49:398,47,0	0/0:15,0:15:27.48:0,27,234	0/0:24,0:24:44.55:0,45,308	0/0:18,2:21:24.73:0,25,307	0/0:13,0:13:31.74:0,32,209	0/0:12,0:12:23.74:0,24,164	0/0:16,0:17:37.68:0,38,251	0/0:18,0:18:41.55:0,42,283	0/0:23,0:23:59.51:0,60,411	0/0:19,0:19:44.55:0,45,308	1/1:6,1:27:42.65:216,43,0	0/1:6,9:16:18.45:220,0,18	1/1:6,14:23:30.35:358,30,0	1/1:0,4:4:6.89:57,7,0	0/0:18,0:20:16.23:0,16,234	0/1:19,1:20:3.39:3,0,238	0/0:12,0:12:7.99:0,8,198	0/0:16,0:16:38.63:0,39,265	1/1:4,18:24:23.42:460,23,0	1/1:6,25:32:59.10:530,59,0	1/1:5,8:13:12.01:111,12,0
chr10	86909042	.	A	AC	5612.51	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-8.464;DP=712;FS=2.886;HRun=7;HaplotypeScore=77.2178;InbreedingCoeff=0.9965;MQ=82.99;MQ0=0;MQRankSum=-2.325;QD=27.92;ReadPosRankSum=2.322;VQSLOD=5.6566;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,32:43:84.26:1009,84,0	0/0:7,0:7:15.01:0,15,139	0/0:30,0:28:65.80:0,66,621	0/0:23,0:22:46.08:0,46,390	0/0:14,0:14:36.05:0,36,348	0/0:16,0:16:48.06:0,48,453	0/0:32,0:32:78.09:0,78,745	1/1:4,18:22:51.12:588,51,0	0/0:24,0:24:69.11:0,69,666	0/0:40,0:40:99:0,105,1002	0/0:14,0:14:39.06:0,39,374	0/0:24,0:24:60.10:0,60,579	0/0:34,0:34:99:0,99,944	0/0:32,0:32:84.12:0,84,805	0/0:40,0:40:99:0,117,1129	0/0:44,0:44:99:0,123,1176	0/0:34,0:34:90.14:0,90,869	1/1:0,9:9:27.08:326,27,0	1/1:3,19:22:57.14:670,57,0	1/1:4,13:17:36.11:435,36,0	1/1:1,30:31:72.22:870,72,0	0/0:20,0:20:51.08:0,51,492	0/0:19,0:19:53.68:0,54,502	0/0:40,0:40:98.89:0,99,938	0/0:24,0:24:63.10:0,63,608	1/1:5,16:21:22.17:539,22,0	1/1:1,27:27:75.12:886,75,0	1/1:0,8:8:24.07:290,24,0
chr10	86910795	.	G	GAA	3233.06	PASS	AB=0.713;AC=24;AF=0.429;AN=56;BaseQRankSum=2.052;DP=586;FS=6.590;HRun=14;HaplotypeScore=95.9729;InbreedingCoeff=0.4861;MQ=62.51;MQ0=19;MQRankSum=-3.297;QD=9.68;ReadPosRankSum=-4.002;VQSLOD=1.2257;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,3:30:41.54:386,42,0	1/1:5,2:9:6.21:108,6,0	0/1:30,0:13:51.58:52,0,61	0/0:33,0:8:8.39:0,8,60	0/0:22,0:28:37.48:0,37,297	0/0:15,1:19:35.14:0,35,261	0/0:14,0:18:5.90:0,6,200	1/1:13,5:20:7.35:273,7,0	0/0:17,0:17:0.44:0,0,152	1/1:8,1:26:9.56:132,10,0	0/1:6,1:19:16.91:108,0,17	0/0:19,0:21:50.29:0,50,400	0/0:17,0:17:35.60:0,36,288	0/0:18,0:20:20.11:0,20,159	0/0:19,0:22:26.66:0,27,309	0/0:14,1:19:6.54:0,7,244	0/1:8,1:28:25.61:110,0,26	0/1:5,1:15:25.34:60,0,25	1/1:15,8:24:16.35:396,16,0	1/1:9,12:23:44.32:470,44,0	1/1:1,7:12:20.42:222,20,0	0/0:13,0:13:25.75:0,26,266	0/0:15,0:16:18.22:0,18,154	0/1:14,1:18:6.66:7,0,288	0/0:7,0:9:4.64:0,5,142	1/1:11,11:29:53.41:577,53,0	0/1:14,13:25:1.03:250,0,1	1/1:2,12:14:21.07:275,21,0
chr10	86911869	.	CAAA	C	841.59	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=5.791;DP=553;FS=2.186;HRun=17;HaplotypeScore=88.6917;InbreedingCoeff=0.9005;MQ=78.98;MQ0=2;MQRankSum=-5.231;QD=9.05;ReadPosRankSum=5.901;VQSLOD=-0.0418;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:15:41.71:0,42,402	1/1:2,5:8:17.84:170,18,0	0/0:34,0:23:20.66:0,21,210	0/1:34,0:20:0.90:1,0,97	0/0:24,0:24:56.96:0,57,641	0/0:28,0:34:79.38:0,79,1039	0/0:7,0:9:18:0,18,201	0/0:37,0:37:60.28:0,60,794	0/0:16,0:17:46.35:0,46,608	1/1:10,10:21:27.83:303,28,0	1/1:7,7:15:29.62:276,30,0	0/0:17,0:20:45.02:0,45,565	0/0:11,0:11:27.08:0,27,403	0/0:14,0:14:30.07:0,30,365	0/0:26,0:27:69.17:0,69,924	0/0:17,0:18:48.11:0,48,678	1/1:6,7:15:26.52:250,27,0	0/0:19,1:20:11.42:0,11,455	0/0:14,0:16:33.04:0,33,396	0/0:14,0:18:32.84:0,33,397	0/0:11,0:12:27.92:0,28,315	0/0:13,0:15:30.02:0,30,404	0/0:16,0:17:36.08:0,36,498	0/0:19,0:21:39.92:0,40,530	0/0:20,0:21:46.31:0,46,643	0/0:18,0:20:51.03:0,51,618	0/0:24,0:25:63.09:0,63,828	0/0:10,0:12:12.01:0,12,148
chr10	86911937	.	AT	A	8366.33	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=10.063;DP=502;FS=3.325;HRun=2;HaplotypeScore=54.6467;InbreedingCoeff=0.9829;MQ=84.54;MQ0=0;MQRankSum=-2.548;QD=37.35;ReadPosRankSum=0.111;VQSLOD=5.2623;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:57.19:740,57,0	1/1:0,5:5:15.05:195,15,0	0/0:25,0:25:72.24:0,72,1062	0/0:17,0:17:51.17:0,51,726	0/0:26,0:26:75.25:0,75,1124	0/0:26,0:26:78.25:0,78,1146	0/0:18,0:18:54.18:0,54,809	1/1:1,22:22:66.20:842,66,0	0/0:19,0:19:54.18:0,54,809	1/1:0,25:25:75.24:974,75,0	1/1:1,16:17:48.16:623,48,0	0/0:18,0:18:51.17:0,51,764	0/0:15,0:15:45.15:0,45,675	0/0:15,0:15:45.15:0,45,675	0/0:23,0:23:69.23:0,69,1015	0/0:15,0:15:45.15:0,45,675	1/1:0,22:22:66.21:857,66,0	1/1:0,15:14:42.14:545,42,0	1/1:2,17:19:54.16:686,54,0	1/1:0,14:14:42.14:545,42,0	1/1:0,15:15:45.15:584,45,0	0/0:20,0:20:60.20:0,60,899	0/0:21,0:21:60.19:0,60,879	0/0:7,0:7:21.07:0,21,315	0/0:13,0:12:39.13:0,39,585	1/1:0,19:19:57.16:724,57,0	1/1:0,26:26:75.24:974,75,0	1/1:0,3:3:6.02:78,6,0
chr10	86912857	.	C	CGCG	9474.08	PASS	AC=44;AF=0.957;AN=46;BaseQRankSum=-1.670;DP=290;FS=3.966;HRun=0;HaplotypeScore=81.9189;InbreedingCoeff=0.2878;MQ=47.05;MQ0=0;MQRankSum=-1.732;QD=33.36;ReadPosRankSum=0.351;VQSLOD=5.2659;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,5:15:18.03:303,18,0	1/1:0,2:2:6.02:126,6,0	./.	0/0:2,0:2:2.57:0,3,44	1/1:6,1:7:6:52,6,0	./.	1/1:11,31:43:93.24:1830,93,0	1/1:1,8:9:27.09:561,27,0	1/1:0,3:3:9.02:153,9,0	1/1:8,6:14:21.03:362,21,0	./.	1/1:2,10:12:30.09:594,30,0	1/1:1,1:3:3.01:33,3,0	1/1:4,11:15:36.11:712,36,0	1/1:2,2:4:6.02:127,6,0	1/1:2,3:6:6.02:127,6,0	1/1:5,15:21:48.12:953,48,0	1/1:5,19:24:54.19:1136,54,0	1/1:4,3:8:15.03:277,15,0	./.	1/1:23,26:51:35.67:596,36,0	./.	1/1:2,1:3:5.97:45,6,0	1/1:6,14:20:36.04:675,36,0	1/1:5,4:9:15.04:282,15,0	1/1:7,4:11:18.06:339,18,0	1/1:1,1:2:3.01:64,3,0	1/1:0,2:2:6.02:127,6,0
chr10	86913006	.	CGT	C	341.87	PASS	AB=0.937;AC=7;AF=0.125;AN=56;BaseQRankSum=4.335;DP=533;FS=2.763;HRun=0;HaplotypeScore=72.6865;InbreedingCoeff=0.1287;MQ=60.65;MQ0=6;MQRankSum=-0.540;QD=3.03;ReadPosRankSum=1.968;VQSLOD=1.8984;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:30:29.04:0,29,257	0/0:6,0:6:18.06:0,18,284	0/1:26,0:8:1.10:1,0,104	0/0:19,0:10:12.01:0,12,146	0/0:6,0:6:9.03:0,9,138	0/0:9,0:9:21.07:0,21,332	0/0:49,4:53:34.41:0,34,1484	0/1:12,0:12:12:12,0,288	0/0:6,0:6:15.05:0,15,241	0/1:7,2:9:53.86:54,0,167	0/0:3,0:3:3:0,3,25	0/0:19,0:19:45.15:0,45,719	0/0:14,0:14:33.10:0,33,492	0/1:20,2:22:32.58:33,0,486	0/0:3,0:3:6.02:0,6,96	0/0:5,0:5:6.02:0,6,96	0/0:26,0:26:63.21:0,63,997	1/1:4,21:25:29.55:361,30,0	0/0:15,0:14:18.03:0,18,240	0/0:4,0:4:3.01:0,3,44	0/0:123,0:123:99:0,189,3907	0/0:5,0:5:15.05:0,15,237	0/0:7,0:7:21.07:0,21,329	0/0:44,4:48:42.05:0,42,1601	0/0:9,0:9:18.05:0,18,285	0/1:18,1:19:3.09:3,0,436	0/0:6,0:6:6.02:0,6,96	0/0:3,0:3:6.02:0,6,96
chr10	86914088	.	A	AC	2245.57	PASS	AB=0.588;AC=18;AF=0.321;AN=56;BaseQRankSum=-3.301;DP=456;FS=3.838;HRun=0;HaplotypeScore=48.1196;InbreedingCoeff=0.4785;MQ=68.55;MQ0=10;MQRankSum=4.881;QD=9.68;ReadPosRankSum=3.823;VQSLOD=3.3447;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:65.57:0,66,493	1/1:0,3:3:5.88:49,6,0	0/0:23,0:12:21.76:0,22,172	0/0:16,0:11:14.15:0,14,138	0/0:17,0:17:41.99:0,42,374	0/0:10,0:10:14.97:0,15,137	0/0:9,0:8:13.77:0,14,103	0/1:12,2:36:99:401,0,106	0/0:14,0:14:29.16:0,29,238	1/1:2,13:16:18.82:294,19,0	0/1:2,1:10:5.30:75,0,5	0/0:10,0:10:20.91:0,21,185	0/0:13,0:13:35.78:0,36,289	0/0:8,0:8:17.87:0,18,133	0/0:14,0:14:26.35:0,26,224	0/0:14,0:14:38.19:0,38,359	1/1:8,31:39:12.34:534,12,0	1/1:5,16:21:14.62:314,15,0	0/1:7,2:21:69.43:232,0,69	1/1:4,0:17:5.42:151,5,0	0/1:4,0:10:0.93:1,0,19	0/0:6,0:6:14.02:0,14,122	0/0:14,0:13:26.01:0,26,236	0/0:13,0:11:20.79:0,21,190	0/0:12,0:12:26.93:0,27,234	1/1:4,1:23:5.18:332,5,0	0/1:5,0:21:22.78:30,0,23	0/1:3,0:8:11.70:12,0,34
chr10	86914431	.	G	GA	2972.09	PASS	AB=0.600;AC=13;AF=0.241;AN=54;BaseQRankSum=-7.541;DP=319;FS=90.686;HRun=0;HaplotypeScore=51.8479;InbreedingCoeff=0.7777;MQ=65.86;MQ0=2;MQRankSum=1.576;QD=21.69;ReadPosRankSum=7.261;VQSLOD=-0.0160;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:33.69:0,34,400	0/0:1,0:1:3:0,3,27	0/0:24,0:17:36.40:0,36,290	0/0:21,0:10:13.11:0,13,67	0/0:6,0:6:11.99:0,12,103	0/0:5,0:5:8.98:0,9,82	0/0:19,0:19:38.17:0,38,283	0/1:6,11:18:0.79:253,0,1	0/0:4,0:4:9:0,9,80	0/0:2,0:2:6:0,6,54	0/0:4,0:4:5.94:0,6,44	0/0:3,0:3:5.68:0,6,37	0/0:4,0:4:11.91:0,12,89	0/0:11,0:11:18.07:0,18,130	0/0:12,0:12:22.54:0,23,181	0/0:10,0:10:23.26:0,23,174	0/0:19,0:18:40.14:0,40,288	0/0:9,0:9:17.74:0,18,135	1/1:2,24:27:61.56:758,62,0	1/1:0,13:13:24.04:292,24,0	1/1:3,25:28:42.62:556,43,0	0/0:3,0:3:5.98:0,6,48	./.	0/0:6,0:6:9.43:0,9,72	0/0:4,0:4:6:0,6,54	1/1:0,14:14:42.10:479,42,0	1/1:2,23:25:42.86:552,43,0	1/1:2,9:12:23.78:263,24,0
chr10	86914503	.	G	GTC	345.03	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=4.763;DP=364;FS=20.769;HRun=0;HaplotypeScore=44.0135;InbreedingCoeff=0.6759;MQ=43.18;MQ0=80;MQRankSum=-4.099;QD=20.30;ReadPosRankSum=-0.142;VQSLOD=1.7269;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:3,0:1:3.01:0,3,46	0/0:7,0:8:18.06:0,18,265	0/0:8,0:8:15.05:0,15,230	0/0:14,0:10:24.08:0,24,367	0/0:29,0:20:42.14:0,42,643	0/0:26,0:14:36.12:0,36,550	0/0:7,0:5:15.05:0,15,228	0/0:7,0:6:15.05:0,15,214	0/0:8,0:8:18.06:0,18,276	0/0:4,0:4:9.03:0,9,128	0/0:6,0:4:12.04:0,12,184	0/0:13,0:11:27.09:0,27,413	0/0:17,0:16:45.15:0,45,689	0/0:12,0:11:27.05:0,27,387	0/0:27,0:23:63.18:0,63,923	1/1:10,7:8:24.08:437,24,0	0/0:15,0:13:33.11:0,33,504	0/0:13,0:13:30.10:0,30,459	0/0:40,0:27:54.18:0,54,827	0/0:6,0:5:12.04:0,12,184	0/0:8,0:6:9.03:0,9,138	0/0:15,0:8:21.07:0,21,312	0/0:12,0:9:24.08:0,24,367	0/0:17,0:16:45.13:0,45,666	0/0:17,0:16:35.82:0,36,550	0/0:7,0:4:12.04:0,12,184
chr10	86914507	.	AGAG	A	161.51	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=4.502;DP=363;FS=17.811;HRun=0;HaplotypeScore=49.7389;InbreedingCoeff=0.7205;MQ=41.84;MQ0=85;MQRankSum=-3.760;QD=9.50;ReadPosRankSum=0.646;VQSLOD=1.2584;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:2,0:1:3.01:0,3,73	./.	0/0:5,0:5:11.95:0,12,188	0/0:9,0:9:24.08:0,24,580	0/0:15,0:10:27.09:0,27,659	0/0:28,0:19:51.12:0,51,1193	0/0:23,0:11:30.10:0,30,688	0/0:8,0:6:15.05:0,15,367	0/0:7,0:6:18.06:0,18,428	0/0:9,0:9:24.08:0,24,589	0/0:6,0:6:15.05:0,15,336	0/0:6,0:4:12.04:0,12,295	0/0:14,0:12:33.11:0,33,795	0/0:17,0:16:45.15:0,45,1109	0/0:11,0:10:27.09:0,27,647	0/0:28,0:23:57.20:0,57,1372	1/1:10,7:7:21.03:253,21,0	0/0:14,0:12:33.11:0,33,810	0/0:13,0:13:36.10:0,36,833	0/0:38,0:25:54.19:0,54,1304	0/0:6,0:5:12.04:0,12,296	0/0:8,0:6:15.05:0,15,365	0/0:15,0:8:18.06:0,18,443	0/0:12,0:9:27.09:0,27,663	0/0:16,0:15:45.15:0,45,1107	0/0:19,0:18:42.13:0,42,963	0/0:7,0:4:12.04:0,12,296
chr10	86914657	.	CT	C	46.53	PASS	AB=0.833;AC=3;AF=0.056;AN=54;BaseQRankSum=3.576;DP=326;FS=3.651;HRun=3;HaplotypeScore=51.6549;InbreedingCoeff=0.4756;MQ=51.97;MQ0=17;MQRankSum=-0.264;QD=2.45;ReadPosRankSum=1.471;VQSLOD=-0.4532;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:4:9:0,9,88	0/0:7,0:4:3.01:0,3,43	0/1:4,1:3:6.36:6,0,8	0/0:14,0:13:26.95:0,27,333	0/0:21,0:21:59.95:0,60,708	0/0:11,0:10:29.20:0,29,341	0/0:22,0:18:44.87:0,45,406	0/0:11,0:10:20.05:0,20,223	0/0:17,0:17:50.79:0,51,512	0/0:11,0:11:23.82:0,24,201	0/0:9,0:8:21.07:0,21,298	0/0:7,0:7:17.27:0,17,211	0/0:11,0:11:30.05:0,30,394	0/0:17,0:17:48.16:0,48,666	0/0:16,0:16:35.99:0,36,443	0/0:16,0:16:34.58:0,35,281	1/1:10,4:13:6.84:127,7,0	0/0:14,0:11:26.95:0,27,259	0/0:9,0:9:20.38:0,20,163	0/0:2,0:1:3.01:0,3,33	0/0:5,0:5:14.94:0,15,133	0/0:9,0:8:17.97:0,18,192	0/0:9,0:9:27.08:0,27,364	0/0:17,0:17:48.01:0,48,612	0/0:15,0:15:38.91:0,39,394	0/0:16,0:15:33.70:0,34,262	0/0:16,0:15:25.33:0,25,256
chr10	86914660	.	T	TTAA	405.63	PASS	AB=0.781;AC=12;AF=0.222;AN=54;BaseQRankSum=8.873;DP=352;FS=7.511;HRun=0;HaplotypeScore=78.7923;InbreedingCoeff=-0.1361;MQ=55.42;MQ0=11;MQRankSum=-3.393;QD=2.46;ReadPosRankSum=-4.543;VQSLOD=-0.6600;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:7,0:7:9.85:47,0,10	0/0:7,0:5:5.88:0,6,66	0/0:6,0:5:2.28:0,2,27	0/0:11,0:15:29.71:0,30,429	0/0:21,0:21:59.89:0,60,873	0/0:11,0:11:29.91:0,30,438	0/1:14,0:17:39.83:40,0,96	0/0:9,0:10:20.86:0,21,279	0/1:8,0:17:13.87:14,0,191	0/1:8,0:12:2.69:3,0,72	0/0:10,0:9:20.90:0,21,366	0/0:6,0:7:18.04:0,18,271	0/0:11,0:11:32.98:0,33,482	0/0:16,0:17:47.93:0,48,756	0/0:15,0:15:32.03:0,32,497	0/1:16,0:18:8.05:8,0,41	0/1:18,0:17:22.02:22,0,124	0/1:5,0:13:81.13:100,0,81	0/0:8,0:12:5.88:0,6,79	1/1:3,0:2:2.70:7,3,0	0/0:6,0:6:17.88:0,18,163	0/0:7,0:9:23.87:0,24,251	0/0:9,0:9:27.08:0,27,443	0/0:17,0:17:50.98:0,51,770	0/1:9,1:20:99:136,0,113	0/1:13,0:16:40.35:138,0,40	0/1:9,0:16:28.95:29,0,34
chr10	86914959	.	A	AT	521.16	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.056;DP=658;FS=0.929;HRun=7;HaplotypeScore=60.3424;InbreedingCoeff=0.9841;MQ=87.29;MQ0=0;MQRankSum=-3.334;QD=30.66;ReadPosRankSum=0.433;VQSLOD=3.8759;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.10:0,81,775	0/0:7,0:7:15.02:0,15,145	0/0:23,0:23:50.96:0,51,467	0/0:24,0:24:62.96:0,63,582	0/0:27,0:27:69:0,69,666	0/0:25,0:25:63.08:0,63,603	0/0:21,0:21:60.10:0,60,579	0/0:33,0:33:93.14:0,93,898	0/0:26,0:26:75.11:0,75,719	0/0:23,0:23:63.10:0,63,608	0/0:18,0:18:51.08:0,51,492	0/0:26,0:26:69.09:0,69,661	0/0:26,0:26:72.11:0,72,695	0/0:18,0:18:54.09:0,54,522	0/0:26,0:26:66.10:0,66,637	0/0:33,0:33:90.13:0,90,864	0/0:30,0:30:78.12:0,78,753	1/1:0,17:17:51.16:616,51,0	0/0:16,0:16:36.05:0,36,347	0/0:20,0:20:54.08:0,54,521	0/0:28,0:28:81.11:0,81,776	0/0:20,0:20:57.09:0,57,550	0/0:18,0:18:54.08:0,54,516	0/0:16,0:16:39.06:0,39,377	0/0:22,0:22:63.10:0,63,608	0/0:35,0:35:99:0,99,956	0/0:33,0:33:87.13:0,87,840	0/0:16,0:16:39.06:0,39,377
chr10	86915420	.	AAAG	A	412.71	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=3.838;DP=489;FS=29.024;HRun=0;HaplotypeScore=77.8799;InbreedingCoeff=0.0822;MQ=49.59;MQ0=33;MQRankSum=1.496;QD=2.49;ReadPosRankSum=-2.514;VQSLOD=-0.3116;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,20:34:39.45:470,39,0	0/1:9,0:9:4.75:5,0,74	0/1:25,0:8:6.88:7,0,39	0/0:22,0:9:6.99:0,7,100	0/0:18,0:18:10.24:0,10,349	0/0:20,0:19:34.85:0,35,456	0/0:19,0:18:10.91:0,11,400	0/0:30,0:28:26.13:0,26,412	0/0:11,0:11:19.98:0,20,263	0/0:18,0:18:21.05:0,21,315	0/1:23,0:23:13.91:14,0,144	0/0:8,0:8:7.81:0,8,143	0/0:5,0:5:9.02:0,9,117	0/0:16,0:15:27.02:0,27,231	0/0:17,0:14:14.47:0,14,284	0/0:13,0:12:25.46:0,25,252	0/1:15,0:12:4.44:4,0,86	0/1:20,0:16:20.28:20,0,225	0/0:24,0:21:13.16:0,13,372	0/0:21,0:20:24.74:0,25,402	0/0:5,0:5:4.82:0,5,85	0/0:11,0:11:20.55:0,21,291	0/0:12,0:12:19.44:0,19,212	0/0:17,0:15:13:0,13,269	0/1:17,0:15:0.63:1,0,346	0/1:19,0:19:21.32:21,0,348	0/0:23,0:21:31.73:0,32,373	0/0:13,0:8:17.50:0,18,229
chr10	86917028	.	CT	C	614.60	PASS	AB=0.819;AC=12;AF=0.214;AN=56;BaseQRankSum=-0.845;DP=557;FS=3.158;HRun=16;HaplotypeScore=82.0385;InbreedingCoeff=0.2860;MQ=75.27;MQ0=1;MQRankSum=2.064;QD=3.20;ReadPosRankSum=5.477;VQSLOD=0.2093;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,1:35:15.46:0,15,160	1/1:5,7:12:14.56:90,15,0	0/1:22,0:17:11.94:12,0,65	0/0:14,0:11:2.22:0,2,8	0/1:24,3:27:7.79:8,0,246	0/1:18,2:21:3.25:3,0,176	0/0:23,2:29:4.04:0,4,324	0/0:21,0:33:52.91:0,53,283	0/0:10,0:12:13.91:0,14,118	0/1:10,7:18:21.90:96,0,22	1/1:7,3:10:8.78:54,9,0	0/0:15,0:15:18.39:0,18,127	0/0:8,0:8:11.94:0,12,91	0/0:17,0:17:16.54:0,17,134	0/0:11,0:13:20.87:0,21,164	0/1:15,3:19:9.93:10,0,159	1/1:9,27:38:56.83:335,57,0	0/1:7,15:24:22.04:163,0,22	0/0:12,0:26:55.17:0,55,283	0/0:10,0:19:29.89:0,30,145	0/0:8,0:18:17.19:0,17,94	0/0:11,2:14:25.20:0,25,201	0/0:11,1:13:5.79:0,6,143	0/0:22,0:22:44.22:0,44,375	0/0:15,2:17:2.96:0,3,129	0/0:10,0:21:36.05:0,36,184	0/0:11,0:24:21.61:0,22,125	0/0:7,0:15:4.31:0,4,56
chr10	86922360	.	CT	C	605.51	PASS	AB=0.842;AC=16;AF=0.286;AN=56;BaseQRankSum=1.939;DP=519;FS=4.042;HRun=16;HaplotypeScore=88.5827;InbreedingCoeff=0.2523;MQ=58.01;MQ0=9;MQRankSum=0.456;QD=2.39;ReadPosRankSum=3.469;VQSLOD=-0.1332;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:40:43.88:126,44,0	0/1:3,3:6:24.04:24,0,38	0/0:11,0:9:3.45:0,3,23	0/0:5,0:4:0:0,0,0	0/1:27,2:29:3.07:3,0,192	0/0:13,1:16:5.52:0,6,166	0/1:19,4:21:24.15:24,0,134	0/0:22,1:32:28.69:0,29,265	0/0:15,0:15:8.85:0,9,56	0/1:11,8:20:41.08:80,0,41	1/1:8,11:19:23.30:143,23,0	0/0:16,0:16:23.74:0,24,176	0/1:18,1:20:1.12:1,0,106	0/0:14,0:13:23.73:0,24,176	0/0:20,2:21:7.45:0,7,184	0/1:17,2:20:21.85:22,0,163	1/1:18,9:31:27.64:261,28,0	1/1:4,4:8:8.63:53,9,0	0/0:11,0:18:28.71:0,29,157	0/0:14,0:22:34.80:0,35,205	0/0:9,0:14:14.36:0,14,82	0/0:6,0:6:5.95:0,6,44	0/0:12,0:12:9.46:0,9,77	0/1:14,1:16:27.33:27,0,83	0/1:14,4:19:8.66:9,0,150	0/0:28,1:32:13.77:0,14,132	0/0:9,0:18:32.07:0,32,173	0/0:4,0:8:5.68:0,6,28
chr10	86923565	.	GA	G	609.11	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.171;DP=596;FS=7.009;HRun=7;HaplotypeScore=55.6212;InbreedingCoeff=0.9233;MQ=71.43;MQ0=0;MQRankSum=-0.017;QD=22.56;ReadPosRankSum=0.480;VQSLOD=3.2892;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:69.16:704,69,0	0/0:17,0:17:42.13:0,42,528	0/0:15,0:14:7.63:0,8,355	0/0:11,0:10:24.07:0,24,288	0/0:24,0:24:66.19:0,66,816	0/0:8,0:8:21.02:0,21,246	0/0:15,0:15:45.14:0,45,566	0/0:28,0:28:78.25:0,78,981	0/0:30,0:30:87.28:0,87,1094	0/0:21,0:21:63.20:0,63,793	0/0:18,0:18:51.16:0,51,640	0/0:26,0:26:69.18:0,69,850	0/0:28,0:28:81.25:0,81,1005	0/0:21,0:21:57.18:0,57,717	0/0:32,0:32:93.28:0,93,1157	0/0:22,0:22:66.21:0,66,829	0/0:21,0:21:60.19:0,60,755	0/0:18,0:18:48.15:0,48,603	0/0:24,0:23:60.18:0,60,741	0/0:22,0:22:60.19:0,60,755	0/0:17,0:17:51.13:0,51,605	0/0:15,0:15:45.14:0,45,566	0/0:14,0:14:39.12:0,39,490	0/0:25,0:25:69.20:0,69,842	0/0:20,0:20:51.16:0,51,631	0/0:22,0:22:57.17:0,57,706	0/0:33,0:33:96.31:0,96,1205	0/0:22,0:22:54.17:0,54,679
chr10	86925161	.	A	ATCTGCC	2239.04	PASS	AB=1.000;AC=20;AF=0.385;AN=52;BaseQRankSum=0.483;DP=522;FS=0.734;HRun=0;HaplotypeScore=118.6741;InbreedingCoeff=0.8095;MQ=71.96;MQ0=9;MQRankSum=-7.612;QD=11.60;ReadPosRankSum=-3.232;VQSLOD=1.8976;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:39.01:0,39,701	1/1:4,3:7:8.90:212,9,0	./.	0/0:37,0:28:2.11:0,2,38	0/0:11,0:11:15.05:0,15,302	0/0:16,0:16:24.08:0,24,466	0/0:25,0:25:27.08:0,27,492	1/1:17,0:16:15.01:294,15,0	0/0:20,0:20:39.13:0,39,784	1/1:15,1:16:15.04:294,15,0	./.	0/0:22,0:22:33.11:0,33,664	0/0:18,0:18:30.10:0,30,604	0/0:14,0:14:21.07:0,21,423	0/0:21,0:21:39.13:0,39,757	0/0:14,0:14:30.10:0,30,599	1/1:30,8:40:9.46:207,9,0	1/1:12,5:17:15.05:436,15,0	1/1:11,0:7:3.01:62,3,0	0/1:11,0:11:0:0,0,0	0/1:41,0:38:0.03:0,0,0	0/0:17,0:17:27.08:0,27,508	0/0:14,0:14:27.09:0,27,526	0/0:34,0:34:63.22:0,63,1268	0/0:10,0:10:9.02:0,9,148	1/1:10,0:10:3.01:89,3,0	1/1:11,0:14:24.08:599,24,0	1/1:7,0:9:9.03:228,9,0
chr10	86925591	.	GT	G	2573.27	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=6.930;DP=684;FS=3.445;HRun=8;HaplotypeScore=80.2946;InbreedingCoeff=0.8649;MQ=66.71;MQ0=0;MQRankSum=-1.450;QD=18.92;ReadPosRankSum=1.695;VQSLOD=3.6158;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.19:0,69,810	1/1:0,8:8:24.04:232,24,0	0/0:13,1:8:9.43:0,9,85	0/0:9,0:7:3.01:0,3,33	0/0:36,0:36:96.28:0,96,1149	0/0:28,0:28:81.24:0,81,966	0/0:21,0:22:57.04:0,57,667	0/0:24,0:24:20.02:0,20,511	0/0:25,0:25:72.22:0,72,870	1/1:5,31:36:93.12:891,93,0	1/1:1,20:21:54.07:521,54,0	0/0:29,0:29:78.24:0,78,942	0/0:29,0:29:78.23:0,78,927	0/0:27,0:27:81.25:0,81,974	0/0:28,0:29:84.12:0,84,993	0/0:29,0:29:81.25:0,81,978	1/1:3,21:24:60.09:579,60,0	1/1:1,22:23:54.09:521,54,0	0/0:19,0:19:42.63:0,43,459	0/1:24,0:24:5.01:5,0,345	0/0:15,0:15:39.04:0,39,426	0/0:36,0:36:99:0,102,1220	0/0:35,0:35:99:0,99,1195	0/0:22,0:22:63.19:0,63,761	0/0:23,0:23:54.15:0,54,642	0/0:23,0:23:36.11:0,36,459	0/0:34,0:34:53.87:0,54,720	0/0:15,0:15:30.06:0,30,330
chr10	86926170	.	GAA	G	1435.10	PASS	AB=0.803;AC=18;AF=0.321;AN=56;BaseQRankSum=-2.365;DP=481;FS=1.601;HRun=17;HaplotypeScore=65.4623;InbreedingCoeff=0.6559;MQ=57.31;MQ0=5;MQRankSum=0.991;QD=7.03;ReadPosRankSum=1.129;VQSLOD=-0.0797;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,1:25:5.01:0,5,126	1/1:6,2:9:9.15:60,9,0	0/0:20,0:8:8.53:0,9,54	0/0:16,0:5:8.43:0,8,64	0/0:26,0:29:62.07:0,62,546	0/0:16,0:18:37.99:0,38,355	0/0:10,0:13:23.05:0,23,200	0/1:18,4:21:40.63:76,0,41	0/0:15,0:15:23.26:0,23,247	1/1:16,12:29:25.87:244,26,0	1/1:7,8:15:20.56:164,21,0	0/0:14,0:13:20.07:0,20,204	0/0:10,0:10:18.06:0,18,224	0/0:11,0:11:23.54:0,24,247	0/0:12,0:12:25.96:0,26,235	0/0:12,0:13:25.86:0,26,219	1/1:12,12:26:10.67:163,11,0	0/0:21,0:21:49.12:0,49,483	0/1:10,7:15:12.07:96,0,12	1/1:10,13:26:24.31:214,24,0	0/1:4,1:4:3.06:18,0,3	0/0:6,0:7:14.51:0,15,134	0/0:18,0:18:26.53:0,27,275	0/0:20,0:20:37.55:0,38,363	0/0:11,0:11:25.93:0,26,217	0/1:11,2:14:10.60:155,0,11	1/1:18,3:21:31.85:242,32,0	1/1:5,12:19:28.92:201,29,0
chr10	86927285	.	A	ATT	433.68	PASS	AB=1.000;AC=3;AF=0.056;AN=54;BaseQRankSum=-0.629;DP=327;FS=0.916;HRun=10;HaplotypeScore=49.5621;InbreedingCoeff=0.3768;MQ=77.00;MQ0=6;MQRankSum=-1.513;QD=10.84;ReadPosRankSum=-1.639;VQSLOD=0.1937;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,8:17:42.07:526,42,0	0/0:4,0:4:12.03:0,12,122	0/1:23,0:11:6.60:7,0,58	0/0:32,0:14:18.04:0,18,149	0/0:14,0:14:33.03:0,33,328	0/0:18,0:18:42.02:0,42,418	0/0:3,0:3:6.01:0,6,61	0/0:29,0:29:72.42:0,72,723	0/0:6,0:6:8.96:0,9,84	0/0:7,0:8:20.77:0,21,190	0/0:14,0:14:24.03:0,24,244	0/0:3,0:3:9.02:0,9,92	0/0:8,0:8:17.99:0,18,176	0/0:4,0:4:5.97:0,6,50	0/0:10,0:10:11.98:0,12,122	0/0:11,0:11:30.06:0,30,305	0/0:26,0:26:54.03:0,54,548	0/0:14,0:13:30.03:0,30,303	0/0:19,0:19:42.04:0,42,418	0/0:11,0:11:20.77:0,21,256	0/0:3,0:3:2.98:0,3,23	0/0:1,0:1:3.01:0,3,31	0/0:2,0:2:3:0,3,31	./.	0/0:8,0:8:18.03:0,18,177	0/0:19,0:20:37.60:0,38,412	0/0:9,0:9:18.02:0,18,183	0/0:9,0:9:24.02:0,24,236
chr10	86929116	.	C	CT	945.15	PASS	AB=0.923;AC=12;AF=0.214;AN=56;BaseQRankSum=-2.679;DP=448;FS=6.504;HRun=14;HaplotypeScore=50.7089;InbreedingCoeff=0.5726;MQ=60.80;MQ0=2;MQRankSum=1.546;QD=7.56;ReadPosRankSum=-0.912;VQSLOD=1.8689;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:25:37.52:0,38,108	1/1:3,6:9:18:158,18,0	0/0:21,0:6:5.66:0,6,33	0/1:15,0:6:5.81:6,0,10	0/0:24,0:24:40.34:0,40,255	0/0:16,0:15:26.52:0,27,173	0/0:9,0:10:22.67:0,23,138	0/0:38,0:38:75.24:0,75,481	0/0:10,0:10:20.61:0,21,134	1/1:5,6:11:9.75:154,10,0	1/1:7,12:21:42.25:367,42,0	0/0:8,0:8:17.72:0,18,114	0/0:11,0:11:17.69:0,18,115	0/0:18,0:19:33.29:0,33,290	0/0:8,0:8:14.77:0,15,96	0/0:17,0:17:35.14:0,35,222	1/1:8,16:24:28.72:376,29,0	0/0:9,0:9:17.70:0,18,115	0/1:19,3:23:32.62:33,0,190	0/1:13,1:13:0.63:1,0,115	0/0:11,0:11:20.65:0,21,133	0/0:4,0:4:2.93:0,3,19	0/0:10,0:10:20.63:0,21,135	0/1:6,1:7:14.52:15,0,46	0/0:16,1:17:26.50:0,26,172	0/0:20,1:21:23.88:0,24,279	0/0:18,0:18:27.44:0,27,204	0/0:24,1:23:33.05:0,33,294
chr10	86931165	.	G	GAC	2474.96	PASS	AB=0.790;AC=21;AF=0.404;AN=52;BaseQRankSum=2.898;DP=506;FS=13.832;HRun=0;HaplotypeScore=92.8359;InbreedingCoeff=0.4724;MQ=63.38;MQ0=6;MQRankSum=-4.066;QD=9.30;ReadPosRankSum=-2.269;VQSLOD=1.6724;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:11.42:76,11,0	0/1:4,1:6:35.50:79,0,35	./.	./.	0/0:20,0:24:47.05:0,47,411	0/1:9,1:10:30.40:30,0,97	0/0:19,0:22:42.85:0,43,423	1/1:19,0:19:26.79:211,27,0	0/0:13,0:12:14.63:0,15,129	0/1:9,6:14:49.63:280,0,50	0/1:9,7:16:9.39:257,0,9	0/0:16,0:21:41.60:0,42,400	0/0:13,0:14:29.86:0,30,292	0/0:15,0:16:23.90:0,24,247	0/0:16,0:18:35.58:0,36,333	0/0:13,0:14:23.90:0,24,248	0/1:27,7:34:99:335,0,178	0/1:10,16:28:7.66:495,0,8	1/1:17,0:17:15.41:140,15,0	1/1:16,0:19:11.99:103,12,0	1/1:25,0:22:11.85:141,12,0	0/0:13,0:13:15.04:0,15,167	0/0:19,0:19:32.27:0,32,321	0/0:20,0:22:14.62:0,15,337	0/0:11,0:11:18.01:0,18,180	0/1:26,1:27:0.41:238,0,0	1/1:9,0:13:17.96:150,18,0	1/1:10,0:11:14.94:129,15,0
chr10	86931199	.	C	CACACACACAG	3196.62	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=5.094;DP=541;FS=1.090;HRun=0;HaplotypeScore=181.0450;InbreedingCoeff=0.0307;MQ=58.79;MQ0=5;MQRankSum=-9.838;QD=18.48;ReadPosRankSum=-3.590;VQSLOD=2.0060;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,14:27:6.02:320,6,0	0/0:8,0:8:21.02:0,21,337	0/0:15,0:10:20.20:0,20,230	0/0:9,0:6:15.44:0,15,142	0/0:25,0:25:68.98:0,69,1513	0/0:15,0:15:35.95:0,36,511	0/0:23,0:23:61.43:0,61,1469	0/1:24,0:24:99:444,0,292	0/0:17,0:16:45.47:0,45,635	0/0:22,0:21:17.71:0,18,650	0/0:13,0:13:33.52:0,34,459	0/0:23,0:23:59.83:0,60,1371	0/0:18,0:18:47.98:0,48,1022	0/0:19,0:19:50.97:0,51,981	0/0:22,0:21:57.09:0,57,1302	0/0:13,0:13:36.07:0,36,860	0/0:32,0:32:80.84:0,81,1339	0/0:29,0:29:45.19:0,45,805	0/1:21,0:21:99:249,0,263	0/1:14,0:14:16.85:393,0,17	0/1:26,0:25:99:268,0,186	0/0:12,0:12:27:0,27,570	0/0:15,0:15:39.09:0,39,1036	0/0:27,0:27:50.80:0,51,1440	0/0:10,0:10:24.04:0,24,526	0/1:35,0:35:99:661,0,437	0/1:14,0:14:50.69:945,0,51	0/1:12,0:11:57.02:57,0,109
chr10	86931240	.	AGT	A	4978.02	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.062;DP=572;FS=17.563;HRun=0;HaplotypeScore=79.0822;InbreedingCoeff=0.9944;MQ=71.93;MQ0=1;MQRankSum=-1.534;QD=33.41;ReadPosRankSum=-1.102;VQSLOD=5.1837;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:33.11:0,33,565	0/0:9,0:9:21.07:0,21,359	0/0:11,0:8:13.88:0,14,263	0/0:27,0:20:20.66:0,21,442	0/0:22,0:22:66.23:0,66,1126	0/0:13,0:13:39.13:0,39,664	0/0:20,0:20:45.15:0,45,772	1/1:7,25:32:75.23:971,75,0	0/0:23,0:23:63.19:0,63,1038	0/0:26,0:26:72.24:0,72,1210	0/0:11,0:11:27.09:0,27,455	0/0:21,0:21:57.18:0,57,950	0/0:17,0:17:45.15:0,45,770	0/0:19,0:19:54.18:0,54,926	0/0:26,0:26:75.21:0,75,1229	0/0:21,0:21:63.22:0,63,1076	0/0:36,0:36:84.29:0,84,1439	0/0:17,0:17:48.12:0,48,792	1/1:5,12:17:36.06:439,36,0	1/1:1,15:16:42.14:552,42,0	1/1:0,25:25:63.20:828,63,0	0/0:14,0:14:39.13:0,39,666	0/0:16,0:16:45.15:0,45,771	0/0:31,0:31:81.28:0,81,1389	0/0:16,0:16:42.14:0,42,708	1/1:2,30:32:87.28:1143,87,0	1/1:1,15:16:48.10:611,48,0	1/1:0,11:11:33.11:434,33,0
chr10	86932050	.	T	TA	702.08	PASS	AB=0.929;AC=3;AF=0.054;AN=56;BaseQRankSum=-5.017;DP=624;FS=5.267;HRun=7;HaplotypeScore=60.0862;InbreedingCoeff=0.6939;MQ=66.26;MQ0=0;MQRankSum=-0.212;QD=18.00;ReadPosRankSum=1.551;VQSLOD=3.4114;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:93.05:0,93,873	0/0:12,0:12:36.03:0,36,337	0/0:17,0:16:37.86:0,38,309	0/1:11,1:11:6.53:7,0,108	0/0:24,0:24:62.29:0,62,577	0/0:22,0:22:54.06:0,54,515	0/0:13,0:13:33.05:0,33,319	0/0:30,0:29:72.08:0,72,684	0/0:22,0:22:63.10:0,63,608	0/0:29,0:29:78.11:0,78,746	0/0:20,0:20:51.08:0,51,492	0/0:15,0:15:45.06:0,45,429	0/0:22,0:22:45.06:0,45,434	0/0:29,0:29:78.08:0,78,737	0/0:20,0:20:54.08:0,54,521	0/0:16,0:15:39.04:0,39,368	0/0:27,0:27:69.01:0,69,639	1/1:3,23:26:66.20:796,66,0	0/0:27,0:27:69.07:0,69,653	0/0:41,0:41:99:0,120,1148	0/0:15,0:15:36.04:0,36,343	0/0:18,0:18:54.08:0,54,520	0/0:25,0:25:72.11:0,72,694	0/0:22,0:22:63.03:0,63,585	0/0:18,0:18:54.09:0,54,521	0/0:24,0:24:57.07:0,57,546	0/0:27,0:27:66.08:0,66,631	0/0:13,0:13:36.05:0,36,348
chr10	86932575	.	A	AG	12573.47	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-16.507;DP=692;FS=0.581;HRun=3;HaplotypeScore=66.4137;InbreedingCoeff=0.9981;MQ=92.11;MQ0=0;MQRankSum=-2.643;QD=37.42;ReadPosRankSum=1.720;VQSLOD=5.3398;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:32:86.86:1167,87,0	1/1:0,9:9:18.06:250,18,0	0/0:25,0:25:72.22:0,72,864	0/0:33,0:33:90.23:0,90,1046	0/0:22,0:22:63.18:0,63,745	0/0:32,0:32:87.27:0,87,1044	0/0:18,0:18:51.16:0,51,612	1/1:3,36:39:99:1498,108,0	0/0:22,0:22:63.17:0,63,743	1/1:4,29:33:90.28:1232,90,0	1/1:1,34:35:90.30:1260,90,0	0/0:22,0:22:66.20:0,66,792	0/0:19,0:19:57.17:0,57,684	0/0:21,0:21:63.19:0,63,756	0/0:18,0:18:54.15:0,54,636	0/0:19,0:19:54.16:0,54,648	1/1:1,8:9:21.07:294,21,0	1/1:2,15:17:25.26:568,25,0	1/1:0,27:27:81.22:1094,81,0	1/1:1,35:36:99:1428,102,0	1/1:2,18:20:57.16:762,57,0	0/0:24,0:24:72.21:0,72,853	0/0:32,0:32:90.28:0,90,1080	0/0:17,0:17:51.16:0,51,612	0/0:32,0:32:93.29:0,93,1116	1/1:0,35:35:99:1425,102,0	1/1:1,21:23:57.19:797,57,0	1/1:0,21:21:57.19:798,57,0
chr10	86932638	.	GCA	G	2277.38	PASS	AB=0.877;AC=31;AF=0.574;AN=54;BaseQRankSum=9.025;DP=680;FS=6.719;HRun=0;HaplotypeScore=130.7991;InbreedingCoeff=-0.0254;MQ=61.25;MQ0=19;MQRankSum=-1.266;QD=4.24;ReadPosRankSum=1.354;VQSLOD=2.2068;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,2:30:54.47:54,0,300	0/1:7,0:11:21.76:22,0,36	./.	0/0:22,0:14:0.47:0,0,1	0/1:21,4:25:2.88:3,0,349	0/0:28,1:29:29.38:0,29,658	0/1:20,2:21:44.86:45,0,181	1/1:27,4:28:5.09:40,5,0	0/1:18,2:20:2.95:3,0,327	0/1:30,0:34:30.97:79,0,31	1/1:15,0:23:5.51:36,6,0	0/1:21,2:23:5.88:6,0,294	0/0:20,0:20:18.91:0,19,384	0/1:24,3:27:71.46:71,0,471	0/1:21,4:25:69.44:69,0,408	0/0:22,0:23:33.09:0,33,451	1/1:6,0:6:0.74:10,1,0	0/1:14,6:20:21.07:188,0,21	1/1:14,1:18:1.09:72,1,0	1/1:15,7:22:27.07:296,27,0	1/1:30,13:44:36.05:375,36,0	0/1:27,4:31:62.73:63,0,345	0/1:25,1:26:8.84:9,0,268	0/1:23,3:26:47.66:48,0,557	0/0:21,1:19:14.62:0,15,161	1/1:22,12:35:47.54:483,48,0	1/1:8,4:13:17.87:171,18,0	1/1:11,7:19:29.89:300,30,0
chr10	86932756	.	T	TAC	1317.69	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=5.234;DP=981;FS=2.012;HRun=0;HaplotypeScore=175.3058;InbreedingCoeff=0.6473;MQ=56.67;MQ0=6;MQRankSum=-3.577;QD=18.05;ReadPosRankSum=-2.696;VQSLOD=3.3262;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,25:45:73.13:1402,73,0	0/0:8,0:8:21.07:0,21,265	0/0:43,0:17:29.68:0,30,380	0/0:39,0:18:42.06:0,42,475	0/0:27,0:27:75.22:0,75,932	0/0:37,0:38:92.06:0,92,1096	0/0:43,0:41:99:0,102,1271	0/0:44,0:43:61.29:0,61,1034	0/0:31,0:31:87.28:0,87,1096	0/0:48,0:48:99:0,123,1471	0/0:24,0:24:57.13:0,57,688	0/0:36,0:36:96.29:0,96,1196	0/0:25,0:25:72.23:0,72,908	0/0:29,0:30:81.05:0,81,957	0/0:24,0:24:51.15:0,51,630	0/0:37,0:37:66.28:0,66,1013	0/0:31,0:31:60.37:0,60,928	0/1:25,0:23:21.63:22,0,414	0/0:28,0:27:53.94:0,54,595	0/0:26,0:26:46.02:0,46,790	0/0:114,0:115:99:0,237,2976	0/0:30,0:30:81.25:0,81,1007	0/0:23,0:23:57.17:0,57,704	0/0:46,0:46:50.51:0,51,1056	0/0:25,0:26:56.97:0,57,676	0/0:43,0:43:99:0,105,1312	0/0:23,0:23:66.20:0,66,817	0/0:18,0:18:45.08:0,45,547
chr10	86932892	.	T	TAC	15262.20	PASS	AB=0.740;AC=23;AF=0.411;AN=56;BaseQRankSum=-17.475;DP=1151;FS=1.756;HRun=0;HaplotypeScore=166.9952;InbreedingCoeff=0.8202;MQ=57.44;MQ0=4;MQRankSum=-0.788;QD=28.32;ReadPosRankSum=-1.998;VQSLOD=5.2545;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:27:24.89:0,25,176	1/1:1,15:16:39.13:643,39,0	0/1:62,0:40:5.06:5,0,494	0/0:47,0:34:55.52:0,56,619	0/0:28,0:28:29.22:0,29,605	0/0:45,0:45:99:0,105,1283	0/0:36,0:36:72.23:0,72,899	1/1:17,36:51:70.79:1605,71,0	0/0:39,0:38:93.25:0,93,1145	1/1:14,42:57:88.85:1935,89,0	0/1:9,29:38:3.03:1015,0,3	0/0:44,0:44:99:0,105,1315	0/0:49,0:49:99:0,105,1299	0/0:43,0:43:99:0,99,1233	0/0:49,0:50:99:0,114,1401	0/0:43,0:43:92.77:0,93,1120	1/1:13,24:36:80.25:1260,80,0	1/1:5,10:15:33.58:537,34,0	0/1:14,14:28:38.29:630,0,38	1/1:10,30:39:90.31:1479,90,0	1/1:27,52:78:99:2751,109,0	0/0:42,0:42:99:0,102,1260	0/0:23,0:23:54.16:0,54,660	0/0:57,0:57:99:0,156,1890	0/0:35,0:35:78.23:0,78,951	1/1:16,41:57:60.26:1921,60,0	1/1:4,11:14:24.08:380,24,0	1/1:1,35:36:34.67:1101,35,0
chr10	86932904	.	CAT	C	639.08	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.481;DP=1164;FS=7.916;HRun=0;HaplotypeScore=213.2670;InbreedingCoeff=0.9989;MQ=54.23;MQ0=18;MQRankSum=-2.438;QD=19.37;ReadPosRankSum=-3.502;VQSLOD=2.1976;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:12,21:28:33.69:734,34,0	0/0:20,0:19:44.97:0,45,435	0/0:61,0:30:30.17:0,30,972	0/0:51,0:31:80.22:0,80,1115	0/0:24,0:24:35.21:0,35,979	0/0:50,0:50:99:0,129,2213	0/0:30,0:30:81.23:0,81,1433	0/0:55,0:53:96.43:0,96,1373	0/0:40,0:39:99:0,108,1898	0/0:59,0:59:99:0,119,1646	0/0:36,0:36:75.04:0,75,783	0/0:39,0:39:99:0,111,2012	0/0:44,0:44:99:0,114,2052	0/0:45,0:45:99:0,122,2061	0/0:47,0:47:99:0,113,2203	0/0:41,0:41:96.98:0,97,1834	0/0:34,0:33:65.07:0,65,785	0/0:23,0:22:36.24:0,36,525	0/0:32,0:26:44.68:0,45,839	0/0:39,0:38:99:0,108,1118	0/0:89,1:87:99:0,203,2184	0/0:41,0:41:99:0,108,1928	0/0:26,0:26:68.76:0,69,1114	0/0:57,0:57:99:0,165,2965	0/0:33,0:33:87.26:0,87,1551	0/0:57,0:57:99:0,116,1631	0/0:17,0:17:42.02:0,42,457	0/0:39,0:39:78.08:0,78,812
chr10	86932922	.	CAT	C	566.64	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.724;DP=1176;FS=8.453;HRun=0;HaplotypeScore=198.9753;InbreedingCoeff=0.9976;MQ=54.03;MQ0=19;MQRankSum=-3.624;QD=18.28;ReadPosRankSum=-2.707;VQSLOD=1.9548;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,25:25:50.16:662,50,0	0/0:20,0:19:51.13:0,51,961	0/0:66,0:32:46.38:0,46,956	0/0:50,0:28:41.29:0,41,906	0/0:27,0:27:60.21:0,60,1154	0/0:43,0:43:99:0,105,1956	0/0:41,0:41:99:0,102,1758	0/0:61,0:60:99:0,175,3239	0/0:41,0:39:99:0,105,1981	0/0:66,0:65:99:0,190,3500	0/0:29,0:29:69.23:0,69,1319	0/0:38,0:38:99:0,102,1822	0/0:49,0:49:99:0,126,2275	0/0:43,0:43:99:0,117,2051	0/0:42,0:42:99:0,111,1972	0/0:45,0:45:99:0,129,2375	0/0:32,0:32:90.31:0,90,1691	0/0:25,1:24:23.34:0,23,1133	0/0:35,0:31:90.25:0,90,1564	0/0:44,0:42:99:0,120,2266	0/0:85,0:82:99:0,220,3953	0/0:35,0:35:96.27:0,96,1736	0/0:29,0:29:75.14:0,75,1445	0/0:52,0:52:99:0,141,2663	0/0:30,0:30:75.24:0,75,1403	0/0:61,0:61:99:0,174,3149	0/0:28,0:27:81.26:0,81,1522	0/0:27,0:27:69.24:0,69,1305
chr10	86933654	.	AC	A	2745.16	PASS	AB=0.581;AC=6;AF=0.107;AN=56;BaseQRankSum=5.027;DP=1037;FS=0.944;HRun=1;HaplotypeScore=108.2287;InbreedingCoeff=0.6358;MQ=45.76;MQ0=148;MQRankSum=3.753;QD=26.40;ReadPosRankSum=-0.373;VQSLOD=3.3817;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:57:99:0,138,2102	1/1:2,5:5:15.05:210,15,0	0/0:44,0:14:39.56:0,40,558	0/0:47,0:14:34.92:0,35,461	0/0:21,0:19:42.12:0,42,628	0/0:31,0:27:72.25:0,72,1150	0/0:30,0:26:69.23:0,69,1083	0/0:108,0:47:99:0,141,2222	0/0:42,0:39:99:0,102,1546	1/1:7,54:54:8.34:1821,8,0	0/1:5,12:16:53.79:456,0,54	0/0:29,0:27:78.25:0,78,1195	0/0:30,0:25:75.25:0,75,1178	0/0:30,0:28:78.27:0,78,1245	0/0:33,0:28:67.47:0,67,1057	0/0:22,0:20:57.19:0,57,907	0/1:4,14:16:3.52:386,0,4	0/0:27,0:23:60.19:0,60,918	0/0:35,0:19:57.17:0,57,863	0/0:31,0:28:75.26:0,75,1188	0/0:109,0:89:99:0,184,2843	0/0:30,0:26:72.23:0,72,1106	0/0:21,0:17:48.16:0,48,754	0/0:38,0:36:92.65:0,93,1434	0/0:32,0:30:81.04:0,81,1253	0/0:55,1:39:66.39:0,66,1621	0/0:22,0:20:45.05:0,45,706	0/0:6,0:4:6.02:0,6,96
chr10	86933734	.	T	TG	1763.66	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.192;DP=978;FS=4.517;HRun=1;HaplotypeScore=110.9450;InbreedingCoeff=0.9969;MQ=69.80;MQ0=0;MQRankSum=3.126;QD=35.27;ReadPosRankSum=-1.577;VQSLOD=2.8806;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,50:49:99:1859,126,0	0/0:9,0:9:24.08:0,24,311	0/0:13,0:13:27.56:0,28,343	0/0:29,0:29:35.57:0,36,614	0/0:38,0:27:72.22:0,72,918	0/0:35,0:35:96.31:0,96,1246	0/0:30,0:30:78.23:0,78,994	0/0:44,0:44:99:0,126,1636	0/0:38,0:38:99:0,108,1386	0/0:53,0:51:99:0,147,1907	0/0:36,0:34:93.30:0,93,1205	0/0:41,0:41:99:0,120,1557	0/0:36,0:36:96.31:0,96,1246	0/0:36,0:36:99:0,102,1323	0/0:36,0:36:99:0,102,1308	0/0:29,0:29:81.26:0,81,1050	0/0:30,0:30:84.27:0,84,1089	0/0:16,0:15:45.15:0,45,583	0/0:25,0:25:72.23:0,72,931	0/0:39,0:37:99:0,105,1347	0/0:79,0:79:99:0,229,2910	0/0:39,0:33:87.28:0,87,1122	0/0:28,0:25:72.23:0,72,933	0/0:41,0:41:99:0,117,1484	0/0:35,0:34:96.30:0,96,1230	0/0:49,0:49:99:0,132,1700	0/0:25,0:25:69.21:0,69,893	0/0:18,0:16:45.15:0,45,580
chr10	86933860	.	G	GAC	5795.78	PASS	AB=0.690;AC=11;AF=0.196;AN=56;BaseQRankSum=-11.581;DP=921;FS=3.597;HRun=0;HaplotypeScore=127.6447;InbreedingCoeff=0.7196;MQ=60.41;MQ0=3;MQRankSum=-1.733;QD=24.87;ReadPosRankSum=-2.465;VQSLOD=4.8978;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:67.81:0,68,1264	0/0:10,0:10:24.07:0,24,292	0/0:49,0:40:30.07:0,30,612	0/0:43,0:31:46.94:0,47,462	0/0:28,0:30:69.03:0,69,809	0/0:30,0:31:78.16:0,78,927	0/0:30,0:31:84.10:0,84,1010	1/1:16,23:39:26.43:848,26,0	0/0:39,0:39:78.17:0,78,896	0/0:40,0:42:99:0,102,1145	0/0:24,0:24:48.13:0,48,564	0/0:28,0:30:71.86:0,72,813	0/0:19,0:19:42.13:0,42,516	0/0:35,0:35:90.10:0,90,1071	0/0:43,0:44:99:0,108,1281	0/0:32,0:32:75.21:0,75,897	0/0:49,0:48:99:0,104,1243	0/0:20,0:20:38.86:0,39,455	0/1:8,12:20:0.83:446,0,1	1/1:6,24:30:54.18:880,54,0	0/1:37,33:67:55.34:1563,0,55	0/0:31,0:31:51.16:0,51,625	0/0:15,0:16:41.95:0,42,479	0/0:33,0:36:81.34:0,81,911	0/0:26,0:24:51.15:0,51,615	1/1:4,25:30:75.24:1184,75,0	1/1:4,22:26:48.16:781,48,0	0/1:12,4:17:48.93:92,0,49
chr10	86933942	.	G	GACAC	670.90	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=0.506;DP=702;FS=18.602;HRun=0;HaplotypeScore=178.7054;InbreedingCoeff=0.2276;MQ=56.51;MQ0=25;MQRankSum=-1.010;QD=3.46;ReadPosRankSum=-4.477;VQSLOD=-0.0494;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:99:108,0,115	0/0:3,0:3:2.04:0,2,6	0/0:29,0:8:22.94:0,23,265	0/0:60,0:26:18.03:0,18,344	0/0:16,0:16:36.05:0,36,594	0/0:25,0:24:54.14:0,54,837	0/0:26,0:21:57.96:0,58,845	1/1:14,0:12:5.78:89,6,0	0/0:23,0:23:54.09:0,54,832	0/1:28,0:27:35.87:107,0,36	0/0:16,0:14:6.37:0,6,26	0/0:28,0:27:66.18:0,66,1058	0/0:23,0:22:60:0,60,978	0/0:34,0:32:72.05:0,72,1091	0/0:26,0:25:61.06:0,61,1009	0/0:33,0:32:69.09:0,69,1090	0/0:41,0:39:46.38:0,46,155	1/1:3,14:21:22.83:321,23,0	0/1:14,0:14:9.45:9,0,81	0/1:11,0:9:10.81:14,0,11	0/1:49,0:46:36.94:58,0,37	0/0:17,0:14:30.09:0,30,501	0/0:18,0:17:35.99:0,36,597	0/0:45,0:44:99:0,114,1922	0/0:19,0:20:39.13:0,39,659	0/1:18,0:16:82.49:112,0,82	0/0:17,0:16:21.92:0,22,141	0/0:5,0:5:8.90:0,9,64
chr10	86933944	.	CAG	C	3001.79	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=2.017;DP=712;FS=18.721;HRun=0;HaplotypeScore=150.0167;InbreedingCoeff=0.8819;MQ=55.38;MQ0=32;MQRankSum=-2.855;QD=12.40;ReadPosRankSum=-0.883;VQSLOD=1.9117;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:27.06:0,27,418	1/1:0,3:3:3.01:43,3,0	0/0:30,0:8:23.11:0,23,320	0/0:60,0:25:20.89:0,21,473	0/0:16,0:16:36.04:0,36,493	0/0:24,0:23:57.07:0,57,835	0/0:28,0:22:59.93:0,60,824	1/1:4,0:14:20.34:186,20,0	0/0:23,0:23:52.63:0,53,796	1/1:22,8:29:56.17:776,56,0	1/1:2,12:12:8.92:128,9,0	0/0:28,0:27:64.44:0,64,790	0/0:23,0:22:59.44:0,59,682	0/0:33,0:31:66.19:0,66,854	0/0:26,0:24:63.18:0,63,932	0/0:35,0:34:74.85:0,75,921	1/1:1,38:37:63.19:844,63,0	0/1:21,0:21:9.65:10,0,20	1/1:12,0:13:15.72:215,16,0	1/1:8,0:9:14.14:95,14,0	1/1:45,3:47:45.31:463,45,0	0/0:18,0:14:30.05:0,30,408	0/0:19,0:17:36.05:0,36,472	0/0:45,0:44:99:0,112,1377	0/0:20,0:20:38.65:0,39,334	1/1:15,0:18:41.38:290,41,0	1/1:8,0:16:23.65:139,24,0	1/1:5,0:5:7.54:29,8,0
chr10	86933948	.	CAG	C	4667.08	PASS	AB=0.998;AC=36;AF=0.643;AN=56;BaseQRankSum=6.466;DP=708;FS=3.670;HRun=0;HaplotypeScore=141.7040;InbreedingCoeff=-0.2734;MQ=53.27;MQ0=36;MQRankSum=0.935;QD=7.61;ReadPosRankSum=4.982;VQSLOD=4.0723;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:15.23:0,15,213	1/1:3,0:3:3.01:43,3,0	0/1:28,0:5:14.85:15,0,91	0/0:56,0:24:3.97:0,4,246	0/1:17,0:16:46.62:66,0,47	0/1:24,0:23:19.31:19,0,217	0/1:28,0:22:49.74:50,0,168	1/1:18,0:16:33.75:294,34,0	0/1:25,0:25:30.11:30,0,180	1/1:30,1:30:59.71:770,60,0	1/1:16,0:14:11.92:153,12,0	0/1:28,1:28:99:133,0,115	0/1:24,0:23:84.77:116,0,85	0/1:34,0:32:99:125,0,112	0/1:28,0:25:75.05:75,0,118	0/1:32,0:31:99:103,0,102	1/1:33,5:36:63.19:845,63,0	0/1:21,0:21:9.52:10,0,22	0/1:14,0:12:1.14:196,0,1	1/1:12,0:10:17.81:166,18,0	1/1:45,6:47:48.32:485,48,0	0/1:18,0:14:30.45:30,0,50	0/1:18,0:16:36.94:65,0,37	0/1:45,0:44:99:127,0,226	0/1:19,0:19:31.05:63,0,31	1/1:19,1:18:42.69:320,43,0	1/1:16,1:16:32.94:361,33,0	1/1:2,0:2:2.50:9,2,0
chr10	86933950	.	GAC	G	5862.57	PASS	AB=0.991;AC=43;AF=0.768;AN=56;BaseQRankSum=-0.433;DP=715;FS=3.948;HRun=0;HaplotypeScore=137.8760;InbreedingCoeff=0.1170;MQ=52.02;MQ0=37;MQRankSum=5.425;QD=8.87;ReadPosRankSum=6.718;VQSLOD=4.3796;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,1:36:14.22:14,0,55	1/1:3,0:3:2.94:18,3,0	0/0:32,0:6:3.01:0,3,30	0/1:52,3:23:46.55:47,0,119	1/1:7,11:17:24.07:274,24,0	1/1:10,10:21:16.75:224,17,0	1/1:11,17:23:32.93:356,33,0	0/1:20,0:18:12.44:12,0,69	1/1:13,11:25:23.90:253,24,0	0/1:32,0:31:20.64:99,0,21	0/1:16,0:14:13.18:48,0,13	1/1:10,17:28:46.04:473,46,0	1/1:9,14:23:41.37:457,41,0	1/1:12,22:34:50.81:536,51,0	1/1:11,17:25:42.12:477,42,0	1/1:14,16:30:44.96:492,45,0	1/1:38,0:36:40.46:332,40,0	0/0:22,0:21:26.97:0,27,238	0/1:15,0:13:18.07:18,0,41	0/1:13,0:10:1.97:33,0,2	0/1:50,0:47:3.83:4,0,52	1/1:11,5:13:23.57:227,24,0	1/1:6,12:16:23.98:273,24,0	1/1:16,23:44:77.05:747,77,0	1/1:5,9:19:35:309,35,0	0/1:18,0:17:5.85:6,0,9	1/1:17,0:16:1.61:127,2,0	1/1:3,0:2:2.04:6,2,0
chr10	86933952	.	C	CAGACAG	293.08	PASS	AB=0.969;AC=11;AF=0.196;AN=56;BaseQRankSum=1.694;DP=722;FS=4.031;HRun=0;HaplotypeScore=198.0832;InbreedingCoeff=-0.0929;MQ=50.81;MQ0=36;MQRankSum=-3.485;QD=1.03;ReadPosRankSum=-5.092;VQSLOD=1.3753;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:7,29:37:1.16:196,1,0	0/0:3,0:3:3.01:0,3,59	0/0:35,0:8:23.53:0,24,252	0/1:52,0:20:30.29:30,0,291	0/0:17,0:17:30.08:0,30,410	0/0:22,0:21:47.65:0,48,696	0/1:26,0:22:44.98:45,0,415	0/0:22,0:20:9.41:0,9,337	0/0:25,0:25:15.72:0,16,614	0/0:32,0:31:42.01:0,42,904	0/0:16,0:14:5.74:0,6,138	0/0:28,0:27:8.39:0,8,674	0/0:23,0:23:24.24:0,24,754	0/1:35,0:34:0.99:1,0,697	0/1:26,0:25:6.63:7,0,705	0/1:31,0:30:6.45:6,0,697	0/0:37,0:35:66.15:0,66,1109	0/1:22,0:21:3:3,0,198	0/0:16,0:14:25.77:0,26,408	0/1:15,0:12:21.08:21,0,147	0/0:56,0:52:33.10:0,33,849	0/1:14,0:13:2.41:2,0,324	0/0:18,0:17:30.10:0,30,440	0/0:45,0:44:65.67:0,66,1544	0/0:18,0:18:38.85:0,39,552	0/0:18,0:16:7.05:0,7,251	0/1:17,0:16:99:106,0,116	0/0:3,0:2:3.01:0,3,50
chr10	86934360	.	C	CA	13111.63	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-14.396;DP=657;FS=0.609;HRun=0;HaplotypeScore=67.0592;InbreedingCoeff=0.9986;MQ=79.90;MQ0=0;MQRankSum=-3.743;QD=42.02;ReadPosRankSum=0.818;VQSLOD=5.4118;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,53:53:99:1918,120,0	1/1:0,7:7:18.06:288,18,0	0/0:25,0:25:65.86:0,66,855	0/0:22,0:21:53.26:0,53,688	0/0:26,0:26:66.17:0,66,855	0/0:19,0:19:51.17:0,51,711	0/0:26,0:26:78.24:0,78,1073	1/1:1,21:22:63.20:980,63,0	0/0:28,0:28:72.24:0,72,1007	1/1:2,33:34:90.31:1432,90,0	1/1:0,22:21:45.15:705,45,0	0/0:22,0:22:63.21:0,63,878	0/0:23,0:23:69.23:0,69,965	0/0:31,0:31:90.30:0,90,1255	0/0:35,0:35:93.29:0,93,1281	0/0:25,0:25:72.24:0,72,1007	1/1:1,28:29:81.28:1293,81,0	1/1:0,16:16:42.14:661,42,0	1/1:0,21:21:63.20:983,63,0	1/1:0,19:19:54.18:863,54,0	1/1:0,19:19:51.17:815,51,0	0/0:14,0:14:30.08:0,30,385	0/0:11,0:11:33.11:0,33,460	0/0:28,0:28:84.28:0,84,1164	0/0:10,0:10:30.10:0,30,413	1/1:0,25:25:75.23:1172,75,0	1/1:0,32:32:96.33:1522,96,0	1/1:0,11:11:30.10:479,30,0
chr10	86934621	.	T	TAC	988.39	PASS	AB=0.806;AC=24;AF=0.429;AN=56;BaseQRankSum=7.942;DP=582;FS=1.194;HRun=0;HaplotypeScore=127.7332;InbreedingCoeff=0.7111;MQ=57.27;MQ0=7;MQRankSum=-5.953;QD=3.49;ReadPosRankSum=-2.948;VQSLOD=2.2548;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:15.75:119,16,0	0/0:6,0:6:1.21:0,1,2	0/0:14,0:4:2.96:0,3,19	0/0:21,0:15:15.07:0,15,97	0/0:31,0:32:54.62:0,55,556	0/1:7,11:19:33.79:125,0,34	0/0:21,0:21:38.65:0,39,408	1/1:36,0:36:16.54:90,17,0	0/0:21,0:21:39.08:0,39,429	1/1:22,0:18:12.27:86,12,0	1/1:17,0:15:5.99:48,6,0	0/0:16,0:16:21.78:0,22,374	0/0:18,0:18:41.94:0,42,475	0/0:18,0:19:36.07:0,36,395	0/0:30,1:31:26.96:0,27,646	0/0:18,0:18:38.85:0,39,429	1/1:19,0:18:7.75:59,8,0	1/1:17,0:17:24.31:177,24,0	1/1:26,0:26:17.68:152,18,0	1/1:22,0:21:3:25,3,0	1/1:17,0:17:3:25,3,0	0/0:14,0:14:31.87:0,32,328	0/0:22,0:22:45.11:0,45,500	0/0:23,0:26:53.80:0,54,570	0/0:19,0:19:47.44:0,47,545	0/1:25,0:25:6.44:60,0,6	1/1:25,0:25:9.15:171,9,0	1/1:7,0:7:6:51,6,0
chr10	86934651	.	C	CACACACAT	2379.12	PASS	AB=0.877;AC=13;AF=0.232;AN=56;BaseQRankSum=3.843;DP=625;FS=9.233;HRun=0;HaplotypeScore=168.9174;InbreedingCoeff=0.2581;MQ=54.69;MQ0=9;MQRankSum=-1.701;QD=10.48;ReadPosRankSum=-2.735;VQSLOD=1.3069;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:30:20.33:168,0,20	0/0:6,0:6:5.34:0,5,28	0/0:18,0:7:17.65:0,18,166	0/0:20,0:13:23.83:0,24,258	0/0:37,0:37:86.56:0,87,1444	0/0:23,0:23:38.64:0,39,738	0/0:25,0:25:47.80:0,48,928	0/1:43,0:43:70.89:535,0,71	0/0:19,0:19:47.58:0,48,923	0/0:24,0:19:16.41:0,16,209	0/1:13,0:11:36.07:36,0,73	0/0:18,0:18:45.55:0,46,888	0/0:21,0:21:54.06:0,54,1004	0/0:17,0:17:42.06:0,42,885	0/0:29,0:28:75.11:0,75,1403	0/0:22,0:21:48.15:0,48,1178	0/0:20,0:18:17.16:0,17,92	0/1:18,1:19:70.93:311,0,71	0/1:20,0:19:16.18:293,0,16	1/1:13,0:12:8.60:55,9,0	0/1:8,15:25:7.99:123,0,8	0/0:19,0:19:28.85:0,29,898	0/0:20,0:19:51.07:0,51,944	0/0:37,0:37:92.77:0,93,1901	0/0:23,0:23:60.06:0,60,1090	0/1:12,17:29:35.71:289,0,36	1/1:23,2:26:18.27:476,18,0	1/1:0,7:8:6.02:257,6,0
chr10	86934878	.	G	GC	224.07	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=4.704;DP=408;FS=0.000;HRun=0;HaplotypeScore=49.9172;InbreedingCoeff=0.9116;MQ=49.68;MQ0=16;MQRankSum=-0.696;QD=24.90;ReadPosRankSum=-0.313;VQSLOD=4.3540;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:8:21.07:316,21,0	0/0:4,0:4:9.03:0,9,126	./.	./.	0/0:31,0:31:66.17:0,66,863	0/0:16,0:15:42.14:0,42,587	0/0:16,0:16:48.16:0,48,669	0/0:10,0:7:15.01:0,15,188	0/0:13,0:13:36.12:0,36,502	0/0:15,0:13:36.12:0,36,503	0/0:15,0:14:36.03:0,36,465	0/0:17,0:17:48.16:0,48,669	0/0:17,0:17:48.16:0,48,670	0/0:14,0:14:36.12:0,36,504	0/0:13,0:12:36.12:0,36,499	0/0:16,0:16:42.14:0,42,587	0/0:25,0:21:60.20:0,60,830	0/0:15,0:10:27.09:0,27,378	0/0:17,0:17:42.14:0,42,585	0/0:17,0:17:48.15:0,48,654	0/0:13,0:13:39.12:0,39,527	0/0:12,0:12:36.12:0,36,502	0/0:22,0:20:44.98:0,45,550	0/0:16,0:16:42.09:0,42,544	0/0:18,0:17:42.13:0,42,571	0/0:25,0:25:71.40:0,71,1001	0/0:16,0:16:48.16:0,48,671	0/0:5,0:5:15.05:0,15,210
chr10	86934925	.	CA	C	1277.38	PASS	AB=0.747;AC=23;AF=0.411;AN=56;BaseQRankSum=-1.892;DP=417;FS=3.693;HRun=15;HaplotypeScore=71.5052;InbreedingCoeff=0.4356;MQ=52.06;MQ0=20;MQRankSum=6.466;QD=5.63;ReadPosRankSum=5.428;VQSLOD=2.6878;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:4:1.83:0,2,4	0/0:4,0:4:2.97:0,3,20	0/1:15,0:7:11.28:11,0,28	0/1:7,0:6:5.60:6,0,29	1/1:4,13:18:31.52:195,32,0	0/1:8,7:18:3.48:77,0,3	1/1:3,9:12:23.62:154,24,0	0/0:28,0:22:27.76:0,28,164	1/1:5,3:8:4.97:25,5,0	0/0:16,0:11:8.74:0,9,45	0/0:17,0:14:21.65:0,22,132	1/1:6,13:22:28.80:158,29,0	0/1:5,4:11:8.93:34,0,9	0/1:5,10:18:0.91:84,0,1	1/1:2,8:12:23.83:133,24,0	1/1:5,14:21:34.51:217,35,0	0/0:21,0:17:16.19:0,16,89	0/0:9,0:4:3.15:0,3,12	0/0:16,0:12:16.63:0,17,105	0/0:12,0:13:14.36:0,14,86	0/0:8,0:7:8.87:0,9,59	0/1:5,3:8:14.08:46,0,14	1/1:9,11:18:2.15:133,2,0	1/1:5,9:14:13.85:83,14,0	0/1:7,8:15:1.88:101,0,2	0/0:27,0:26:31.57:0,32,185	0/0:19,0:14:6.95:0,7,34	0/0:4,0:3:0:0,0,0
chr10	86935199	.	GAAA	G	2349.93	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=9.321;DP=523;FS=0.000;HRun=11;HaplotypeScore=92.4785;InbreedingCoeff=0.7104;MQ=55.87;MQ0=20;MQRankSum=-2.822;QD=11.75;ReadPosRankSum=1.895;VQSLOD=0.9044;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:58.48:0,58,584	1/1:0,3:3:9.03:118,9,0	0/0:28,0:5:4.80:0,5,160	0/0:46,0:13:13.97:0,14,148	0/0:20,0:21:56.99:0,57,895	0/0:13,0:14:39.13:0,39,736	0/0:19,0:19:45.15:0,45,828	0/1:28,0:24:51.08:51,0,79	0/0:11,0:12:36.07:0,36,589	1/1:1,20:21:57.14:718,57,0	1/1:0,9:9:23.93:271,24,0	0/0:11,0:11:30.09:0,30,537	0/0:18,0:18:45.15:0,45,870	0/0:22,0:22:54.19:0,54,1044	0/0:16,0:17:45.09:0,45,800	0/0:19,0:19:57.14:0,57,965	1/1:5,21:26:35.23:650,35,0	1/1:0,10:10:24.08:315,24,0	0/1:23,0:18:11.35:68,0,11	1/1:17,0:17:3.15:54,3,0	1/1:9,0:9:8.41:51,8,0	0/0:8,0:8:24.08:0,24,467	0/0:14,0:15:33.09:0,33,577	0/0:24,0:24:72.20:0,72,1298	0/0:15,0:15:39.13:0,39,692	1/1:13,1:14:16.58:101,17,0	1/1:29,0:28:30.31:143,30,0	0/1:11,0:8:14.24:14,0,30
chr10	86935207	.	AAAAC	A	3082.84	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=9.950;DP=543;FS=3.784;HRun=0;HaplotypeScore=104.3677;InbreedingCoeff=0.6192;MQ=56.95;MQ0=20;MQRankSum=-3.979;QD=13.01;ReadPosRankSum=0.362;VQSLOD=3.2333;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:93.30:93,0,122	0/0:5,0:5:0.96:0,1,46	0/0:29,0:6:14.30:0,14,168	0/0:49,0:16:26.50:0,27,275	0/0:26,0:26:65.83:0,66,978	0/0:13,0:13:39.13:0,39,793	0/0:18,0:18:54.08:0,54,1008	1/1:29,4:28:50.80:633,51,0	0/0:13,0:13:32.99:0,33,628	0/1:23,0:22:21.66:28,0,22	0/1:9,0:9:4.11:4,0,21	0/0:13,0:13:36:0,36,603	0/0:17,0:17:45.15:0,45,970	0/0:21,0:21:63.15:0,63,1263	0/0:16,0:16:45.03:0,45,870	0/0:20,0:20:60.19:0,60,1222	1/1:24,0:24:0.93:24,1,0	1/1:10,0:10:10.28:22,10,0	1/1:20,3:18:46.29:552,46,0	1/1:3,13:16:39.04:525,39,0	1/1:3,6:9:8.70:82,9,0	0/0:8,0:8:24.07:0,24,452	0/0:14,0:14:39.07:0,39,666	0/0:25,0:25:69.13:0,69,1428	0/0:19,0:19:54.11:0,54,1001	1/1:3,14:17:46.12:499,46,0	1/1:9,19:27:44.68:620,45,0	0/1:12,0:9:46.41:198,0,46
chr10	86935208	.	AAAC	A	3181.76	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=11.100;DP=544;FS=3.228;HRun=0;HaplotypeScore=95.7390;InbreedingCoeff=0.7315;MQ=56.90;MQ0=20;MQRankSum=-2.950;QD=13.04;ReadPosRankSum=0.270;VQSLOD=3.3353;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:0.72:107,1,0	0/1:5,0:5:28.75:38,0,29	0/0:29,0:6:17.34:0,17,166	0/0:50,0:17:27.81:0,28,243	0/0:24,0:24:64.32:0,64,827	0/0:13,0:13:39.12:0,39,664	0/0:18,0:18:53.64:0,54,849	1/1:33,1:29:55.74:574,56,0	0/0:12,0:12:36.01:0,36,540	0/1:25,0:24:39.42:222,0,39	1/1:9,0:9:19.24:113,19,0	0/0:14,0:14:38.98:0,39,542	0/0:17,0:17:45.15:0,45,825	0/0:21,0:21:63.15:0,63,1059	0/0:16,0:16:45:0,45,735	0/0:20,0:20:60.19:0,60,1052	1/1:24,0:24:28.72:244,29,0	1/1:10,0:10:22.77:122,23,0	1/1:22,1:18:49.89:473,50,0	1/1:16,0:16:38.47:340,38,0	1/1:6,2:8:9.03:113,9,0	0/0:8,0:8:24.07:0,24,389	0/0:14,0:14:38.98:0,39,554	0/0:25,0:25:72.12:0,72,1222	0/0:19,0:19:54.08:0,54,845	1/1:16,1:17:47.58:427,48,0	1/1:26,2:27:44.77:481,45,0	0/1:12,0:9:43.17:142,0,43
chr10	86935209	.	AAC	A	2345.99	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=8.615;DP=550;FS=5.491;HRun=0;HaplotypeScore=90.8122;InbreedingCoeff=0.7350;MQ=56.84;MQ0=20;MQRankSum=-2.567;QD=11.33;ReadPosRankSum=-2.652;VQSLOD=2.4167;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:58.26:270,58,0	0/0:5,0:5:3.91:0,4,41	0/0:29,0:6:11.12:0,11,131	0/0:51,0:17:25.34:0,25,206	0/0:23,0:23:48.10:0,48,652	0/0:13,0:13:39.10:0,39,538	0/0:19,0:19:54.10:0,54,697	1/1:33,2:30:66.01:602,66,0	0/0:12,0:12:35.63:0,36,431	0/1:25,0:24:1.76:2,0,98	0/1:10,0:10:0.87:1,0,21	0/0:14,0:14:38.95:0,39,456	0/0:17,0:17:45.15:0,45,663	0/0:23,0:23:69.13:0,69,899	0/0:16,0:16:44.61:0,45,588	0/0:20,0:20:60.18:0,60,849	0/0:24,0:24:6.04:0,6,37	0/0:10,0:10:3.13:0,3,11	1/1:23,0:18:50.87:441,51,0	1/1:15,1:16:37.73:280,38,0	1/1:8,0:8:8.98:75,9,0	0/0:8,0:8:24.05:0,24,315	0/0:14,0:14:38.37:0,38,439	0/0:26,0:26:75.09:0,75,1016	0/0:19,0:19:54.06:0,54,690	1/1:16,1:17:41.57:361,42,0	1/1:26,2:27:44.39:381,44,0	0/1:12,0:9:36.78:125,0,37
chr10	86935210	.	AC	A	2294.86	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=7.806;DP=551;FS=6.184;HRun=1;HaplotypeScore=82.7535;InbreedingCoeff=0.8736;MQ=56.89;MQ0=20;MQRankSum=-4.862;QD=13.42;ReadPosRankSum=-2.672;VQSLOD=1.6201;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:73.08:476,73,0	0/0:5,0:5:10.86:0,11,58	0/0:29,0:6:8.96:0,9,75	0/0:52,0:18:27.78:0,28,196	0/0:22,1:23:15.91:0,16,479	0/0:13,0:13:38.86:0,39,403	0/0:19,0:19:56.34:0,56,549	1/1:34,1:30:75.66:589,76,0	0/0:12,0:12:30.89:0,31,330	0/0:25,0:24:31.92:0,32,194	0/0:10,0:10:13.81:0,14,59	0/0:14,0:14:38.91:0,39,379	0/0:17,0:17:45.12:0,45,500	0/0:23,0:23:69.09:0,69,715	0/0:15,0:15:40.65:0,41,445	0/0:20,0:20:60.11:0,60,641	0/0:25,0:25:45.69:0,46,184	0/0:10,0:10:16.77:0,17,57	1/1:23,0:18:50.70:390,51,0	1/1:15,1:16:36.20:220,36,0	1/1:8,0:8:8.92:63,9,0	0/0:8,0:8:24.04:0,24,249	0/0:14,0:14:25.40:0,25,300	0/0:26,0:26:74.97:0,75,789	0/0:20,0:20:57.02:0,57,573	1/1:17,0:17:36.52:317,37,0	1/1:26,2:27:44.55:319,45,0	0/1:12,0:9:29.84:118,0,30
chr10	86935211	.	CA	C	455.71	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=9.662;DP=554;FS=4.551;HRun=11;HaplotypeScore=90.4402;InbreedingCoeff=0.5439;MQ=58.74;MQ0=20;MQRankSum=-1.190;QD=2.65;ReadPosRankSum=1.276;VQSLOD=-0.1175;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:29,3:32:41.99:448,42,0	0/0:5,0:5:14.97:0,15,142	0/0:30,0:7:12.02:0,12,110	0/0:53,0:19:20.29:0,20,289	0/0:22,0:22:32.83:0,33,608	0/0:14,0:14:41.91:0,42,490	0/0:19,0:19:54.17:0,54,666	0/1:36,0:31:20.57:21,0,35	0/0:12,0:12:33.06:0,33,397	0/0:25,0:24:65.72:0,66,585	0/0:12,0:12:32.79:0,33,261	0/0:13,0:13:33.11:0,33,414	0/0:18,0:18:48.13:0,48,578	0/0:23,0:23:66.21:0,66,829	0/0:15,0:15:42.11:0,42,512	0/0:20,0:20:60.19:0,60,754	0/0:25,0:25:62.81:0,63,553	0/0:10,0:10:23.94:0,24,204	1/1:22,1:18:14.53:44,15,0	0/1:16,0:16:8.75:9,0,18	1/1:8,0:8:3.53:9,4,0	0/0:8,0:8:18.06:0,18,226	0/0:14,0:14:32.46:0,32,362	0/0:25,0:25:75.21:0,75,916	0/0:19,0:19:57.18:0,57,710	0/1:17,0:17:12.89:13,0,21	1/1:28,0:27:23.09:67,23,0	0/1:12,0:9:9.04:9,0,51
chr10	86935219	.	CA	C	510.54	PASS	AB=0.979;AC=3;AF=0.054;AN=56;BaseQRankSum=4.675;DP=543;FS=2.583;HRun=7;HaplotypeScore=87.7354;InbreedingCoeff=0.6099;MQ=59.82;MQ0=14;MQRankSum=0.746;QD=6.63;ReadPosRankSum=-0.717;VQSLOD=0.5416;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:23,7:30:63.27:605,63,0	0/0:5,0:5:12.04:0,12,150	0/0:22,0:8:4.78:0,5,147	0/1:45,1:16:1.94:2,0,241	0/0:22,0:22:63.13:0,63,767	0/0:15,0:15:36.99:0,37,443	0/0:19,0:19:51.13:0,51,614	0/0:40,0:37:83.96:0,84,955	0/0:13,0:13:39.12:0,39,490	0/0:24,0:23:66.19:0,66,814	0/0:12,0:12:33.06:0,33,389	0/0:12,0:12:36.12:0,36,453	0/0:17,0:17:45.13:0,45,554	0/0:22,0:22:66.20:0,66,817	0/0:14,0:14:39.12:0,39,490	0/0:21,0:21:60.19:0,60,747	0/0:25,0:25:66.19:0,66,806	0/0:9,0:9:24.08:0,24,298	0/0:20,0:16:40.87:0,41,440	0/0:14,0:14:27.08:0,27,218	0/0:8,0:8:5.85:0,6,51	0/0:10,0:10:27.09:0,27,338	0/0:13,0:13:32.77:0,33,387	0/0:25,0:25:72.23:0,72,905	0/0:19,0:19:54.17:0,54,679	0/0:21,0:21:54.38:0,54,580	0/0:32,0:31:53.66:0,54,553	0/0:11,0:9:15.04:0,15,168
chr10	86935456	.	CA	C	3195.10	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=9.140;DP=530;FS=4.648;HRun=10;HaplotypeScore=56.7863;InbreedingCoeff=0.9680;MQ=68.65;MQ0=2;MQRankSum=-0.037;QD=18.15;ReadPosRankSum=1.904;VQSLOD=4.4479;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,34:38:99:878,102,0	0/0:6,0:6:6.01:0,6,60	0/0:14,0:8:17.38:0,17,145	0/0:17,0:12:17.82:0,18,126	0/0:28,0:29:74.86:0,75,783	0/0:22,0:22:54.15:0,54,596	0/0:14,0:14:39.09:0,39,422	1/1:8,25:33:44.81:614,45,0	0/0:18,0:18:48.10:0,48,502	0/0:32,0:32:75.20:0,75,830	0/0:9,0:9:27.07:0,27,299	0/0:17,0:17:42.08:0,42,441	0/0:14,0:14:36.08:0,36,378	0/0:25,0:25:57.14:0,57,616	0/0:15,0:15:42.10:0,42,457	0/0:20,0:21:50.94:0,51,529	0/0:22,0:22:54.14:0,54,590	0/0:26,0:26:59.29:0,59,703	1/1:6,9:14:26.98:234,27,0	1/1:5,13:19:29.92:253,30,0	1/1:3,10:13:20.99:182,21,0	0/0:6,0:6:12.03:0,12,133	0/0:12,0:12:27.04:0,27,281	0/0:17,0:17:45.09:0,45,480	0/0:18,0:18:45.02:0,45,473	1/1:2,25:27:71.92:615,72,0	1/1:3,22:25:59.98:521,60,0	1/1:2,4:6:11.99:104,12,0
chr10	86937278	.	T	TA	3634.29	PASS	AB=0.709;AC=24;AF=0.429;AN=56;BaseQRankSum=-3.019;DP=554;FS=8.717;HRun=13;HaplotypeScore=71.0722;InbreedingCoeff=0.6995;MQ=68.95;MQ0=3;MQRankSum=1.398;QD=12.53;ReadPosRankSum=-0.610;VQSLOD=3.0479;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,34:49:69.11:749,69,0	1/1:2,1:9:17.24:100,17,0	0/0:35,0:18:22.70:0,23,141	0/1:19,0:10:14.72:16,0,15	0/0:27,2:29:13.69:0,14,362	0/0:23,0:23:62.32:0,62,424	0/0:14,0:14:9.45:0,9,175	1/1:4,19:24:50.81:445,51,0	0/0:20,0:20:35.62:0,36,245	1/1:4,0:14:17.49:155,17,0	1/1:6,1:17:29.04:168,29,0	0/0:19,1:20:21.64:0,22,276	0/0:9,0:9:25.79:0,26,167	0/0:11,0:12:25.79:0,26,170	0/0:18,0:18:41.39:0,41,279	0/0:22,1:23:19.64:0,20,279	1/1:4,1:17:31.56:180,32,0	1/1:3,3:6:6.01:56,6,0	0/1:11,12:22:28.78:180,0,29	1/1:7,23:30:54.19:597,54,0	0/1:4,11:15:2.56:121,0,3	0/0:5,0:5:5.90:0,6,41	0/0:14,0:14:22.80:0,23,146	0/0:24,1:25:39.07:0,39,407	0/0:15,1:16:29.65:0,30,205	1/1:10,23:34:42.03:477,42,0	1/1:4,20:24:22.35:344,22,0	0/1:2,4:6:11.15:47,0,11
chr10	86938905	.	A	AAACAC	1897.87	PASS	AB=0.986;AC=3;AF=0.054;AN=56;BaseQRankSum=-3.371;DP=761;FS=5.967;HRun=0;HaplotypeScore=143.9734;InbreedingCoeff=0.5863;MQ=78.20;MQ0=2;MQRankSum=-2.315;QD=17.41;ReadPosRankSum=-0.012;VQSLOD=3.1493;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,28:38:69.24:1984,69,0	0/0:11,0:11:27.08:0,27,480	0/0:50,0:38:4.38:0,4,438	0/1:70,0:56:18.96:19,0,785	0/0:30,0:30:72.11:0,72,1207	0/0:23,0:23:45.08:0,45,749	0/0:19,0:19:42.09:0,42,692	0/0:27,0:27:47.44:0,47,862	0/0:25,0:25:69.18:0,69,1171	0/0:34,0:34:75.24:0,75,1380	0/0:22,0:22:51.16:0,51,924	0/0:15,0:15:30.10:0,30,552	0/0:23,0:23:60.18:0,60,1090	0/0:25,0:25:63.22:0,63,1190	0/0:30,0:30:69.17:0,69,1157	0/0:30,0:29:72.23:0,72,1298	0/0:29,0:29:66.15:0,66,1095	0/0:16,0:16:27.07:0,27,455	0/0:17,0:17:30.04:0,30,423	0/0:35,0:35:81.19:0,81,1355	0/0:22,0:22:60.15:0,60,1023	0/0:27,0:27:60.07:0,60,962	0/0:23,0:23:60.17:0,60,1046	0/0:33,0:33:84.24:0,84,1513	0/0:20,0:20:51.11:0,51,886	0/0:26,0:26:63.22:0,63,1174	0/0:28,0:28:66.16:0,66,1091	0/0:10,0:10:18.06:0,18,322
chr10	86940157	.	C	CT	2076.59	PASS	AB=0.625;AC=9;AF=0.161;AN=56;BaseQRankSum=2.204;DP=585;FS=0.463;HRun=9;HaplotypeScore=88.2296;InbreedingCoeff=0.8573;MQ=64.78;MQ0=0;MQRankSum=2.315;QD=20.56;ReadPosRankSum=1.435;VQSLOD=4.0636;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,117,1015	0/1:2,3:5:14.02:87,0,14	0/0:22,0:21:26.92:0,27,290	0/0:14,0:10:26.95:0,27,228	0/0:22,0:22:53.97:0,54,468	0/0:17,1:18:11.84:0,12,331	0/0:30,0:30:77.96:0,78,676	0/0:25,0:25:44.97:0,45,391	0/0:20,0:20:56.98:0,57,494	1/1:5,19:25:53.95:564,54,0	1/1:2,10:12:27.01:268,27,0	0/0:19,1:20:23.70:0,24,420	0/0:13,0:13:38.99:0,39,338	0/0:19,0:19:53.99:0,54,467	0/0:16,0:16:41.99:0,42,364	0/0:19,0:19:44.97:0,45,390	1/1:5,33:39:81.04:877,81,0	1/1:2,17:20:42.42:446,42,0	0/0:18,0:18:47.90:0,48,402	0/0:20,0:20:44.96:0,45,390	0/0:24,0:24:53.43:0,53,467	0/0:9,0:8:11.98:0,12,104	0/0:17,0:17:44.99:0,45,389	0/0:29,0:29:80.96:0,81,699	0/0:19,0:19:38.97:0,39,339	0/0:28,0:28:74.33:0,74,630	0/0:21,0:21:47.84:0,48,400	0/0:18,0:18:44.98:0,45,390
chr10	86940701	.	C	CTTCTACT	5153.76	PASS	AB=0.941;AC=11;AF=0.196;AN=56;BaseQRankSum=-5.866;DP=420;FS=1.941;HRun=0;HaplotypeScore=90.8296;InbreedingCoeff=0.8634;MQ=81.55;MQ0=0;MQRankSum=-9.914;QD=64.42;ReadPosRankSum=-0.540;VQSLOD=4.5381;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.18:0,60,1445	1/1:0,5:5:15.01:486,15,0	0/0:12,0:12:33.09:0,33,693	0/0:14,0:13:24.03:0,24,529	0/0:24,0:24:60.21:0,60,1409	0/0:21,0:21:60.18:0,60,1398	0/0:11,0:11:30.09:0,30,684	0/0:30,0:30:72.22:0,72,1556	0/0:12,0:12:36.12:0,36,899	1/1:8,11:19:54.19:1935,54,0	1/1:5,12:18:36.04:1204,36,0	0/0:6,0:6:12.04:0,12,282	0/0:4,0:4:12.04:0,12,300	0/0:8,0:8:24.08:0,24,569	0/0:5,0:5:15.05:0,15,374	0/0:21,0:21:60.19:0,60,1443	1/1:6,6:12:21.07:757,21,0	1/1:4,5:10:18.06:700,18,0	0/0:12,0:12:33.11:0,33,809	0/0:24,0:24:63.20:0,63,1492	0/0:29,0:29:87.26:0,87,2011	0/0:10,0:10:30.09:0,30,673	0/0:10,0:10:30.07:0,30,695	0/0:13,0:13:36.12:0,36,899	0/0:10,0:10:27.09:0,27,639	0/1:15,1:16:71.42:71,0,1003	0/0:29,0:29:75.24:0,75,1748	0/0:13,0:13:39.12:0,39,924
chr10	86941351	.	TC	T	1373.49	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.254;DP=581;FS=0.628;HRun=1;HaplotypeScore=58.1806;InbreedingCoeff=0.9392;MQ=76.41;MQ0=0;MQRankSum=-1.366;QD=37.12;ReadPosRankSum=0.714;VQSLOD=3.8358;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:99:1468,105,0	0/0:10,0:10:30.09:0,30,456	0/0:11,0:11:17.99:0,18,246	0/0:15,0:15:13.13:0,13,362	0/0:33,0:33:99:0,99,1549	0/0:23,0:23:66.22:0,66,1050	0/0:17,0:17:51.15:0,51,769	0/0:28,0:28:81.26:0,81,1253	0/0:21,0:21:63.21:0,63,1006	0/0:24,0:24:69.22:0,69,1082	0/0:19,0:19:57.19:0,57,909	0/0:30,0:30:90.31:0,90,1437	0/0:20,0:20:60.19:0,60,935	0/0:22,0:22:66.23:0,66,1053	0/0:26,0:26:78.27:0,78,1247	0/0:12,0:12:36.12:0,36,575	0/0:23,0:23:69.22:0,69,1076	0/0:13,0:13:39.13:0,39,621	0/0:15,0:15:45.15:0,45,685	0/0:19,0:19:57.18:0,57,886	0/0:50,0:50:99:0,151,2388	0/0:18,0:18:54.18:0,54,863	0/0:21,0:21:63.21:0,63,1007	0/0:9,0:9:27.09:0,27,432	0/0:15,0:15:45.14:0,45,693	0/0:24,0:24:72.23:0,72,1108	0/0:22,0:22:63.20:0,63,979	0/0:4,0:4:12.04:0,12,192
chr10	86941487	.	AGTTTG	A	4039.02	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.133;DP=668;FS=1.004;HRun=0;HaplotypeScore=126.2032;InbreedingCoeff=0.9999;MQ=78.14;MQ0=0;MQRankSum=-3.611;QD=45.90;ReadPosRankSum=1.789;VQSLOD=3.9964;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.33:0,96,2759	1/1:1,14:15:39.13:780,39,0	0/0:37,0:36:72.21:0,72,1687	0/0:27,0:24:45.15:0,45,1260	0/0:32,0:32:84.28:0,84,2383	0/0:18,0:18:54.19:0,54,1519	0/0:18,0:18:51.18:0,51,1507	0/0:32,0:31:84.27:0,84,2314	0/0:20,0:20:60.20:0,60,1573	1/1:8,27:35:84.27:1641,84,0	1/1:3,16:19:39.13:779,39,0	0/0:27,0:27:66.23:0,66,1958	0/0:19,0:19:57.20:0,57,1631	0/0:29,0:29:78.27:0,78,2227	0/0:26,0:26:72.25:0,72,2115	0/0:14,0:14:42.14:0,42,1249	1/1:3,16:19:42.14:839,42,0	0/0:16,0:16:44.82:0,45,1153	0/0:21,0:21:45.15:0,45,1276	0/0:27,0:27:75.26:0,75,2183	0/0:35,0:35:96.33:0,96,2792	0/0:26,0:26:72.25:0,72,2052	0/0:22,0:22:63.22:0,63,1824	0/0:16,0:16:45.15:0,45,1286	0/0:20,0:20:51.17:0,51,1516	0/0:26,0:26:75.25:0,75,2123	0/0:27,0:27:72.23:0,72,2021	0/0:11,0:11:33.11:0,33,981
chr10	86942025	.	G	GA	5391.96	PASS	AB=0.633;AC=23;AF=0.411;AN=56;BaseQRankSum=-9.500;DP=514;FS=7.802;HRun=10;HaplotypeScore=49.8786;InbreedingCoeff=0.8981;MQ=78.33;MQ0=0;MQRankSum=1.452;QD=22.37;ReadPosRankSum=-2.941;VQSLOD=4.5015;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:20.95:0,21,172	1/1:2,6:8:12.03:128,12,0	0/0:20,0:19:5.69:0,6,170	0/0:8,0:8:13.38:0,13,85	0/0:30,0:32:90.96:0,91,722	0/0:26,0:27:67.96:0,68,548	0/0:14,0:14:35.96:0,36,296	0/1:8,10:19:41.96:289,0,42	0/0:25,0:25:71.90:0,72,588	1/1:7,16:23:48.09:495,48,0	1/1:3,20:25:59.74:579,60,0	0/0:7,0:7:20.98:0,21,172	0/0:18,0:18:50.90:0,51,414	0/0:13,0:13:37.20:0,37,296	0/0:21,0:21:53.91:0,54,443	0/0:20,1:21:21.94:0,22,387	1/1:2,16:18:20.49:423,20,0	1/1:3,13:16:36.09:384,36,0	1/1:4,15:19:48.06:482,48,0	1/1:7,29:36:78.03:781,78,0	1/1:1,9:10:18.05:192,18,0	0/0:17,0:17:44.94:0,45,369	0/0:19,0:19:44.91:0,45,369	0/0:10,0:10:26.96:0,27,222	0/0:9,0:9:23.97:0,24,197	1/1:6,22:30:68.80:678,69,0	1/1:2,29:31:72.18:768,72,0	1/1:0,6:6:18.05:192,18,0
chr10	86942391	.	G	GA	705.43	PASS	AB=0.981;AC=5;AF=0.089;AN=56;BaseQRankSum=-1.684;DP=638;FS=9.559;HRun=9;HaplotypeScore=70.0738;InbreedingCoeff=0.8357;MQ=72.83;MQ0=13;MQRankSum=-2.752;QD=8.20;ReadPosRankSum=-0.132;VQSLOD=1.0283;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:40.11:657,40,0	0/0:8,0:8:20.99:0,21,182	0/0:46,1:27:19.98:0,20,238	0/1:49,0:22:0.45:0,0,97	0/0:37,0:38:99:0,107,913	0/0:16,0:16:47.99:0,48,416	0/0:11,0:11:29.99:0,30,260	0/0:29,0:29:74.96:0,75,648	0/0:15,1:16:11.81:0,12,331	0/0:21,0:21:50.96:0,51,443	0/0:27,1:28:38.77:0,39,562	0/0:17,0:17:44.99:0,45,391	0/0:11,0:11:29.94:0,30,253	0/0:17,0:17:44.48:0,44,368	0/0:24,0:24:62.98:0,63,547	0/0:17,0:17:50.99:0,51,442	0/0:19,0:19:50.96:0,51,437	1/1:1,6:7:15.04:166,15,0	0/0:26,0:25:68.18:0,68,574	0/0:33,0:33:77.96:0,78,673	0/0:10,0:10:29.99:0,30,260	0/0:27,0:27:53.86:0,54,454	0/0:26,1:27:35.81:0,36,540	0/0:15,0:15:44.83:0,45,379	0/0:17,0:17:44.98:0,45,391	0/0:34,0:34:86.47:0,86,738	0/0:37,0:37:81.95:0,82,743	0/0:5,0:5:11.99:0,12,104
chr10	86943956	.	TA	T	454.06	PASS	AB=0.962;AC=4;AF=0.071;AN=56;BaseQRankSum=-1.130;DP=406;FS=0.000;HRun=9;HaplotypeScore=52.5214;InbreedingCoeff=0.3791;MQ=74.48;MQ0=9;MQRankSum=0.721;QD=10.09;ReadPosRankSum=1.092;VQSLOD=1.8369;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:25:58.27:525,58,0	0/0:5,0:5:15.04:0,15,173	0/0:55,0:17:44.54:0,45,425	0/0:76,0:29:49.43:0,49,429	0/0:19,0:19:54.13:0,54,603	0/0:14,0:14:39.12:0,39,450	0/0:5,0:5:9.03:0,9,104	0/0:23,0:23:50.95:0,51,239	0/0:5,0:5:15.04:0,15,165	0/0:14,0:14:36.07:0,36,415	0/0:10,0:10:30.09:0,30,343	0/0:6,0:6:15.04:0,15,165	0/1:11,1:12:0.07:0,0,240	0/0:2,0:1:3.01:0,3,35	0/0:9,0:9:18.05:0,18,208	0/0:8,0:7:15.04:0,15,173	0/0:21,0:21:33.12:0,33,501	0/0:7,0:7:18.05:0,18,207	0/0:20,0:20:43.42:0,43,186	0/1:8,0:8:34.48:34,0,37	0/0:6,0:6:17.11:0,17,83	0/0:3,0:3:6.02:0,6,69	0/0:4,0:4:9.03:0,9,104	0/0:2,0:2:6.02:0,6,69	0/0:11,0:11:27.06:0,27,300	0/0:17,0:16:41.39:0,41,201	0/0:11,0:11:22.51:0,23,104	0/0:8,0:8:22.61:0,23,108
chr10	86944334	.	A	AAACAAAAC	639.36	PASS	AB=1.000;AC=3;AF=0.056;AN=54;BaseQRankSum=3.729;DP=244;FS=3.946;HRun=0;HaplotypeScore=87.7424;InbreedingCoeff=0.3966;MQ=46.43;MQ0=4;MQRankSum=-4.351;QD=37.61;ReadPosRankSum=2.044;VQSLOD=3.1469;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,7:12:19.39:729,19,0	0/0:1,0:1:3.01:0,3,43	0/0:16,0:6:15.03:0,15,260	./.	0/0:5,0:5:15.05:0,15,292	0/0:4,0:4:9.03:0,9,248	0/0:4,0:4:11.53:0,12,257	0/0:36,0:34:96.84:0,97,892	0/0:7,0:7:12.04:0,12,251	0/0:7,0:7:21.07:0,21,350	0/0:9,0:9:23.16:0,23,358	0/0:4,0:4:6.02:0,6,125	0/0:5,0:5:12.04:0,12,194	0/0:4,0:4:12.04:0,12,291	0/0:6,0:6:18.06:0,18,458	0/0:8,0:8:24.08:0,24,542	0/0:22,0:22:51.77:0,52,878	0/0:8,0:8:20.52:0,21,211	0/0:13,0:12:11.26:0,11,279	0/0:5,0:5:15.01:0,15,214	0/0:4,0:3:9.01:0,9,127	0/0:1,0:1:3.01:0,3,83	0/0:5,0:5:9.03:0,9,249	0/0:5,0:5:15.02:0,15,236	0/0:6,0:6:18.05:0,18,398	0/0:9,0:9:21.03:0,21,294	0/0:15,0:15:44.70:0,45,564	0/1:5,0:5:4.66:5,0,108
chr10	86944349	.	AT	A	285.84	PASS	AB=0.845;AC=14;AF=0.280;AN=50;BaseQRankSum=3.165;DP=150;FS=4.461;HRun=1;HaplotypeScore=50.1598;InbreedingCoeff=0.0414;MQ=42.40;MQ0=6;MQRankSum=-3.183;QD=2.86;ReadPosRankSum=0.114;VQSLOD=-0.4943;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,1:9:13.53:93,14,0	./.	0/0:7,0:3:9.03:0,9,106	./.	0/0:2,0:2:6.02:0,6,71	0/0:3,0:3:9.03:0,9,107	0/0:3,0:3:9.02:0,9,96	0/1:26,0:23:68.70:69,0,133	0/0:2,0:2:6.01:0,6,60	0/1:2,1:3:2.58:12,0,3	0/1:5,2:7:13.77:14,0,33	0/0:1,0:1:3.01:0,3,36	./.	0/0:3,0:3:9.02:0,9,96	0/0:5,0:5:15.05:0,15,178	0/0:5,0:5:15.05:0,15,178	0/1:18,2:20:10.62:11,0,115	0/1:2,1:3:0.31:14,0,0	0/1:6,2:7:0.15:58,0,0	0/1:2,0:2:8.11:14,0,8	1/1:3,0:2:2.97:20,3,0	0/0:1,0:1:3.01:0,3,36	0/0:4,0:4:9.03:0,9,107	0/0:1,0:1:3.01:0,3,36	0/0:4,0:4:12.03:0,12,132	0/1:4,1:5:20.79:30,0,21	0/1:8,2:10:25:83,0,25	0/1:3,1:4:10.29:10,0,27
chr10	86944351	.	ATATATATATATATATATATATAT	A	2112.03	PASS	AB=0.831;AC=18;AF=0.375;AN=48;BaseQRankSum=4.851;DP=132;FS=17.891;HRun=0;HaplotypeScore=102.6655;InbreedingCoeff=0.2267;MQ=40.67;MQ0=6;MQRankSum=-5.566;QD=22.47;ReadPosRankSum=4.865;VQSLOD=-0.0961;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:12.45:129,12,0	./.	0/0:6,0:3:9.01:0,9,165	./.	0/0:1,0:1:3:0,3,25	0/0:2,0:2:6.02:0,6,76	0/0:2,0:2:6.02:0,6,85	0/1:23,0:20:38.14:48,0,38	0/0:1,0:1:3.01:0,3,38	0/1:2,0:3:6.56:150,0,7	0/1:5,0:7:11.99:296,0,12	./.	./.	0/0:2,0:2:6.02:0,6,76	0/0:5,0:5:15.05:0,15,191	0/0:4,0:4:12.04:0,12,231	0/1:18,0:20:17.33:319,0,17	0/1:2,1:3:1.27:168,0,1	1/1:6,2:7:13.53:391,14,0	1/1:2,0:2:4.21:23,4,0	1/1:3,0:2:2.97:20,3,0	0/0:1,0:1:3.01:0,3,38	0/0:4,0:4:12.02:0,12,138	0/0:1,0:1:3.01:0,3,38	0/0:2,0:2:6.02:0,6,76	1/1:4,1:5:2.49:195,2,0	0/1:6,2:8:33.77:346,0,34	1/1:2,1:3:5.45:179,5,0
chr10	86944660	.	T	TAA	771.46	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.394;DP=470;FS=1.643;HRun=10;HaplotypeScore=56.1130;InbreedingCoeff=0.6813;MQ=77.30;MQ0=0;MQRankSum=-1.869;QD=24.11;ReadPosRankSum=-0.292;VQSLOD=2.9619;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:32:61.91:866,62,0	0/0:2,0:2:3.01:0,3,30	0/0:21,0:21:1.25:0,1,145	0/0:8,0:7:15.03:0,15,148	0/0:16,0:16:36.01:0,36,359	0/0:16,0:16:42.09:0,42,427	0/0:13,0:13:30.06:0,30,305	0/0:23,0:23:45.04:0,45,453	0/0:17,0:17:45.02:0,45,435	0/0:21,0:21:60.12:0,60,604	0/0:10,0:10:27.06:0,27,275	0/0:25,0:26:71.88:0,72,707	0/0:19,0:19:45.08:0,45,451	0/0:13,0:13:24.01:0,24,244	0/0:18,0:18:42.06:0,42,427	0/0:27,0:27:66.11:0,66,658	0/0:14,0:14:33.03:0,33,325	0/0:25,0:26:68.85:0,69,744	0/0:18,0:18:48.08:0,48,477	0/0:16,0:16:13.25:0,13,339	0/0:12,0:12:27.04:0,27,268	0/0:6,0:6:18.04:0,18,183	0/0:10,0:11:26.74:0,27,249	0/0:18,0:18:51.11:0,51,518	0/0:12,0:12:36.07:0,36,359	0/0:23,0:23:54.07:0,54,544	0/0:21,0:22:47.56:0,48,525	0/0:10,0:10:27.06:0,27,275
chr10	86948026	.	T	TC	2061.99	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-10.226;DP=751;FS=0.000;HRun=1;HaplotypeScore=68.9794;InbreedingCoeff=0.9978;MQ=77.49;MQ0=0;MQRankSum=-4.178;QD=38.19;ReadPosRankSum=3.287;VQSLOD=4.2561;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,53:54:99:2157,144,0	0/0:13,0:13:39.13:0,39,505	0/0:26,0:26:71.55:0,72,850	0/0:17,0:17:48.08:0,48,580	0/0:27,0:27:81.11:0,81,1004	0/0:33,0:33:99:0,99,1252	0/0:30,0:30:90.28:0,90,1154	0/0:32,0:32:87.27:0,87,1098	0/0:31,0:31:93.26:0,93,1156	0/0:39,0:39:99:0,117,1482	0/0:18,0:18:54.18:0,54,701	0/0:25,0:25:69.22:0,69,895	0/0:27,0:27:81.21:0,81,1031	0/0:26,0:26:78.24:0,78,998	0/0:29,0:29:84.27:0,84,1091	0/0:38,0:38:99:0,111,1415	0/0:32,0:32:96.31:0,96,1246	0/0:13,0:13:39.09:0,39,488	0/0:27,0:27:81.25:0,81,1038	0/0:18,0:18:51.14:0,51,635	0/0:47,0:47:99:0,135,1722	0/0:37,0:37:99:0,111,1388	0/0:12,0:12:30.10:0,30,389	0/0:23,0:23:66.18:0,66,826	0/0:10,0:10:30.10:0,30,389	0/0:30,0:30:90.29:0,90,1157	0/0:28,0:28:84.22:0,84,1046	0/0:9,0:9:27.09:0,27,350
chr10	86949034	.	A	ACAG	99.85	PASS	AB=0.880;AC=2;AF=0.038;AN=52;BaseQRankSum=3.047;DP=416;FS=5.312;HRun=0;HaplotypeScore=85.0211;InbreedingCoeff=-0.0629;MQ=40.02;MQ0=24;MQRankSum=0.824;QD=3.03;ReadPosRankSum=-2.129;VQSLOD=1.2417;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,6:14:99:169,0,179	0/0:3,0:2:6.02:0,6,71	./.	./.	0/0:24,0:24:18.06:0,18,335	0/0:21,0:21:24.05:0,24,384	0/0:20,0:12:27.09:0,27,487	0/0:22,0:22:57.12:0,57,634	0/0:20,0:20:32.95:0,33,418	0/0:21,0:21:53.53:0,54,591	0/0:13,0:12:28.29:0,28,309	0/0:15,0:14:15.05:0,15,279	0/0:16,0:16:17.65:0,18,334	0/0:13,0:12:9.03:0,9,168	0/0:13,0:13:12.04:0,12,223	0/0:12,0:12:24.08:0,24,446	0/0:14,0:12:2.09:0,2,256	0/0:8,0:5:12:0,12,118	0/1:14,0:12:16.98:17,0,230	0/0:27,0:26:63.19:0,63,748	0/0:6,0:5:15.04:0,15,174	0/0:18,0:16:15.04:0,15,249	0/0:14,0:14:21.06:0,21,360	0/0:20,0:20:30.10:0,30,559	0/0:7,0:6:9.03:0,9,168	0/0:18,0:17:51.13:0,51,582	0/0:27,0:26:44.21:0,44,741	0/0:8,0:6:15.04:0,15,173
chr10	86949035	.	T	TGGCTCAC	435.53	PASS	AB=1.000;AC=4;AF=0.077;AN=52;BaseQRankSum=-0.547;DP=413;FS=4.769;HRun=0;HaplotypeScore=100.3919;InbreedingCoeff=0.3887;MQ=39.57;MQ0=25;MQRankSum=-4.528;QD=8.38;ReadPosRankSum=-3.437;VQSLOD=1.1138;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,6:13:29.62:491,30,0	0/0:3,0:2:6.02:0,6,115	./.	./.	0/0:24,0:24:18.03:0,18,501	0/0:20,0:20:21.06:0,21,527	0/0:20,0:12:27.02:0,27,620	0/0:24,0:24:57.12:0,57,970	0/0:19,0:18:26.98:0,27,508	0/1:21,0:21:5.91:6,0,789	0/0:13,0:12:30.10:0,30,534	0/0:15,0:14:15.05:0,15,411	0/0:16,0:16:17.89:0,18,500	0/0:13,0:12:9.03:0,9,251	0/0:13,0:13:12.04:0,12,306	0/0:13,0:13:24.08:0,24,666	0/0:13,0:11:24.08:0,24,456	0/0:8,0:5:12.04:0,12,201	0/1:13,0:11:46.89:47,0,302	0/0:27,0:26:46.22:0,46,1134	0/0:6,0:5:15.05:0,15,283	0/0:18,0:16:15.04:0,15,360	0/0:14,0:14:20.97:0,21,452	0/0:20,0:20:30.10:0,30,813	0/0:7,0:6:8.86:0,9,251	0/0:18,0:17:33.17:0,33,838	0/0:26,0:25:66.23:0,66,1249	0/0:8,0:6:15.05:0,15,283
chr10	86949123	.	TA	T	4325.69	PASS	AB=0.813;AC=26;AF=0.464;AN=56;BaseQRankSum=6.316;DP=406;FS=8.254;HRun=11;HaplotypeScore=49.8283;InbreedingCoeff=0.7801;MQ=64.00;MQ0=9;MQRankSum=0.608;QD=18.49;ReadPosRankSum=0.918;VQSLOD=5.6522;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:43.96:0,44,248	1/1:0,9:9:23.97:197,24,0	0/0:9,0:9:14.87:0,15,142	0/0:8,0:5:5.27:0,5,79	0/0:31,1:33:86.94:0,87,868	0/0:20,2:21:1.89:0,2,431	0/1:2,1:3:15.58:16,0,55	1/1:6,24:29:68.81:555,69,0	0/0:10,0:8:21.05:0,21,223	1/1:3,13:16:40.99:326,41,0	1/1:1,17:19:52.96:425,53,0	0/0:9,1:10:5.44:0,5,263	0/0:12,0:12:30.08:0,30,320	0/0:5,0:5:12.03:0,12,128	0/0:8,0:8:18.05:0,18,192	0/0:7,0:6:15.04:0,15,160	1/1:1,24:25:68.88:560,69,0	1/1:2,27:28:68.92:566,69,0	1/1:3,10:12:29.92:239,30,0	1/1:3,16:19:44.83:361,45,0	1/1:1,5:5:8.99:74,9,0	0/0:5,0:5:12.03:0,12,128	0/0:14,0:14:21.38:0,21,310	0/0:9,0:9:21.94:0,22,226	0/1:12,2:14:10.20:10,0,305	1/1:3,22:23:37.52:505,38,0	1/1:1,16:17:38.94:320,39,0	1/1:1,7:7:20.98:172,21,0
chr10	86949134	.	A	AT	543.08	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.438;DP=431;FS=9.235;HRun=3;HaplotypeScore=65.2809;InbreedingCoeff=0.7543;MQ=67.94;MQ0=4;MQRankSum=-2.081;QD=28.58;ReadPosRankSum=0.608;VQSLOD=2.2834;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:19:51.14:638,51,0	0/0:9,0:9:23.40:0,23,137	0/0:12,0:12:2.56:0,3,129	0/0:7,0:5:11.97:0,12,116	0/0:35,0:35:90.96:0,91,1049	0/0:21,0:20:53.97:0,54,582	0/0:4,0:4:11.94:0,12,115	0/0:29,0:29:79.23:0,79,503	0/0:8,0:7:21.06:0,21,250	0/0:20,0:19:55.95:0,56,378	0/0:19,0:19:55.63:0,56,332	0/0:10,0:10:30.01:0,30,338	0/0:15,0:15:33.08:0,33,373	0/0:8,0:8:24.03:0,24,246	0/0:8,0:8:24.05:0,24,267	0/0:6,0:5:15.05:0,15,178	0/0:27,0:27:70.32:0,70,422	0/0:33,0:32:79.21:0,79,487	0/0:16,0:15:41.34:0,41,282	0/0:16,0:16:43.88:0,44,258	0/0:6,0:6:11.77:0,12,75	0/0:9,0:9:21.04:0,21,223	0/0:13,0:13:33.02:0,33,369	0/0:9,0:9:21.06:0,21,250	0/0:16,0:15:44.95:0,45,479	0/0:26,0:24:67.42:0,67,410	0/0:22,0:22:52.70:0,53,322	0/0:8,0:8:23.47:0,23,146
chr10	86949258	.	A	ATCC	861.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.357;DP=480;FS=18.007;HRun=0;HaplotypeScore=68.7615;InbreedingCoeff=0.9048;MQ=80.70;MQ0=1;MQRankSum=-5.540;QD=39.14;ReadPosRankSum=-0.838;VQSLOD=2.4885;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,13:22:45.13:956,45,0	0/0:3,0:3:9.03:0,9,147	0/0:16,0:16:39.12:0,39,610	0/0:12,0:11:33.11:0,33,530	0/0:22,0:22:60.04:0,60,980	0/0:28,0:28:69.21:0,69,1079	0/0:19,0:19:57.19:0,57,929	0/0:22,0:22:63.21:0,63,1004	0/0:17,0:17:51.16:0,51,808	0/0:25,0:25:72.23:0,72,1126	0/0:19,0:19:51.17:0,51,832	0/0:16,0:16:45.15:0,45,733	0/0:15,0:15:36.12:0,36,578	0/0:10,0:10:27.09:0,27,441	0/0:17,0:17:45.15:0,45,735	0/0:20,0:20:57.19:0,57,928	0/0:30,0:30:87.30:0,87,1417	0/0:17,0:17:11.21:0,11,652	0/0:16,0:16:48.16:0,48,782	0/0:18,0:18:54.18:0,54,882	0/0:13,0:13:36.11:0,36,563	0/0:10,0:10:30.10:0,30,490	0/0:8,0:8:21.07:0,21,343	0/0:15,0:15:45.15:0,45,735	0/0:19,0:19:57.15:0,57,900	0/0:26,0:26:72.25:0,72,1176	0/0:18,0:18:54.18:0,54,868	0/0:7,0:7:21.07:0,21,343
chr10	86949287	.	ATT	A	590.60	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.331;DP=491;FS=5.162;HRun=3;HaplotypeScore=61.9575;InbreedingCoeff=0.9434;MQ=78.85;MQ0=0;MQRankSum=-2.810;QD=29.53;ReadPosRankSum=-0.887;VQSLOD=2.4932;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:45.15:685,45,0	0/0:5,0:5:15.05:0,15,290	0/0:9,0:9:23.95:0,24,350	0/0:14,0:15:19.20:0,19,474	0/0:23,0:23:63.22:0,63,1203	0/0:22,0:22:63.22:0,63,1188	0/0:21,0:21:57.20:0,57,1083	0/0:27,0:27:78.27:0,78,1498	0/0:19,0:19:57.17:0,57,1033	0/0:23,0:23:66.21:0,66,1193	0/0:16,0:16:48.16:0,48,927	0/0:16,0:16:48.16:0,48,919	0/0:16,0:16:45.15:0,45,838	0/0:13,0:13:36.12:0,36,696	0/0:25,0:25:75.26:0,75,1443	0/0:22,0:22:66.23:0,66,1269	0/0:29,0:29:87.27:0,87,1645	0/0:15,0:15:42.11:0,42,774	0/0:21,0:21:63.21:0,63,1171	0/0:16,0:16:48.16:0,48,922	0/0:17,0:17:48.16:0,48,927	0/0:8,0:8:21.07:0,21,406	0/0:10,0:10:27.09:0,27,522	0/0:16,0:16:48.15:0,48,879	0/0:19,0:19:57.20:0,57,1095	0/0:23,0:23:69.24:0,69,1332	0/0:21,0:21:60.20:0,60,1117	0/0:4,0:4:12.04:0,12,232
chr10	86949851	.	C	CAA	1612.29	PASS	AB=0.811;AC=24;AF=0.429;AN=56;BaseQRankSum=4.899;DP=393;FS=4.193;HRun=13;HaplotypeScore=68.9964;InbreedingCoeff=0.4890;MQ=63.23;MQ0=5;MQRankSum=-0.316;QD=7.43;ReadPosRankSum=-3.163;VQSLOD=0.1514;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,2:26:34.83:323,35,0	1/1:0,0:4:2.50:9,2,0	0/0:14,0:7:14.25:0,14,85	0/1:10,0:6:1.28:1,0,46	0/0:19,0:22:32.05:0,32,254	0/0:16,0:17:35.41:0,35,280	0/0:7,0:7:5.87:0,6,52	1/1:6,6:15:20.46:199,20,0	0/0:8,0:10:14.27:0,14,103	1/1:7,0:15:19.96:69,20,0	0/1:6,0:12:10.49:38,0,10	0/0:12,0:12:5.59:0,6,52	0/0:16,0:16:11.34:0,11,105	0/1:11,0:11:24.61:25,0,43	0/0:11,0:11:14.46:0,14,116	0/1:11,0:11:8.96:9,0,91	0/1:9,1:30:49.13:114,0,49	0/0:16,0:16:29.87:0,30,264	1/1:5,4:8:0.67:169,1,0	1/1:2,5:10:16.25:130,16,0	0/1:5,7:15:5.89:180,0,6	0/0:9,0:9:17.98:0,18,158	0/0:15,0:16:10.44:0,10,214	0/0:12,0:12:20.85:0,21,184	0/0:12,0:12:23.88:0,24,211	1/1:6,8:18:32.44:319,32,0	1/1:5,12:22:19.31:169,19,0	1/1:1,1:6:5.51:49,6,0
chr10	86950073	.	CT	C	271.26	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=-0.060;DP=209;FS=0.000;HRun=14;HaplotypeScore=28.8803;InbreedingCoeff=0.5541;MQ=61.25;MQ0=15;MQRankSum=1.675;QD=8.75;ReadPosRankSum=3.161;VQSLOD=1.6700;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:41.62:0,42,346	1/1:0,1:1:2.98:21,3,0	0/0:9,0:7:5.55:0,6,33	0/0:8,0:5:3:0,3,26	0/0:6,0:7:9.01:0,9,84	0/0:10,0:10:22.17:0,22,180	0/0:9,0:8:12.48:0,12,112	0/0:11,0:8:9:0,9,80	0/0:1,0:1:2.99:0,3,24	1/1:3,3:5:8.91:62,9,0	1/1:2,4:5:11.89:82,12,0	0/0:3,0:3:6.01:0,6,56	0/0:8,0:8:17.34:0,17,138	0/0:4,1:4:0:0,0,0	0/0:4,0:3:9.01:0,9,84	0/0:4,0:4:6.01:0,6,56	1/1:3,15:18:13.89:239,14,0	0/0:27,0:26:50.74:0,51,431	0/0:14,0:12:15.21:0,15,200	./.	0/0:1,0:1:3:0,3,28	./.	0/0:3,0:3:7.82:0,8,60	0/0:4,0:4:3:0,3,28	0/0:2,0:2:2.96:0,3,19	0/0:8,1:9:17.97:0,18,159	0/0:6,0:5:8.98:0,9,77	0/0:6,0:5:7.82:0,8,61
chr10	86950574	.	GAAA	G	2596.42	PASS	AB=0.610;AC=22;AF=0.393;AN=56;BaseQRankSum=0.686;DP=483;FS=3.440;HRun=17;HaplotypeScore=73.8957;InbreedingCoeff=0.6957;MQ=62.37;MQ0=19;MQRankSum=-1.045;QD=10.39;ReadPosRankSum=2.615;VQSLOD=0.1802;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:37:38.59:231,39,0	1/1:2,3:6:8.86:79,9,0	0/0:30,0:7:17.91:0,18,153	0/0:28,0:10:17.22:0,17,129	0/0:10,0:10:24.06:0,24,352	0/0:8,0:13:26.96:0,27,286	0/0:17,0:18:39.72:0,40,532	1/1:10,19:27:44.53:349,45,0	0/0:7,0:7:12.51:0,13,184	1/1:4,12:16:37.55:370,38,0	1/1:3,4:8:14.79:140,15,0	0/0:11,0:10:24.04:0,24,333	0/0:17,0:18:42.07:0,42,586	0/0:11,0:12:27:0,27,286	0/0:15,0:18:47.92:0,48,580	0/0:15,0:18:32.86:0,33,454	0/1:10,13:22:21.22:89,0,21	1/1:10,9:18:10.81:225,11,0	1/1:13,15:24:5.89:278,6,0	1/1:5,8:12:6.86:136,7,0	0/1:4,8:12:2.98:131,0,3	0/0:6,0:6:15.03:0,15,216	0/0:9,0:11:24.02:0,24,334	0/0:16,0:16:36.03:0,36,499	0/0:12,0:14:25.74:0,26,311	0/1:10,15:25:13.87:423,0,14	1/1:10,3:15:27.07:228,27,0	0/1:3,6:9:4.10:122,0,4
chr10	86950774	.	C	CAAACAAAACA	12097.79	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=2.782;DP=668;FS=8.011;HRun=0;HaplotypeScore=212.9366;InbreedingCoeff=0.9497;MQ=61.56;MQ0=5;MQRankSum=-12.725;QD=43.36;ReadPosRankSum=-6.205;VQSLOD=2.4269;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:25:51.11:0,51,1123	1/1:9,0:9:15.04:505,15,0	0/0:18,0:16:15.05:0,15,409	0/0:27,0:19:8.84:0,9,147	0/0:26,0:26:39.13:0,39,1102	0/0:23,0:23:39.13:0,39,1095	0/0:30,0:30:16.96:0,17,953	1/1:18,0:17:21.54:719,22,0	0/0:22,0:22:45.15:0,45,1284	1/1:29,0:31:42.14:1835,42,0	1/1:21,0:25:12.04:485,12,0	0/0:19,0:19:42.14:0,42,1240	0/0:26,0:26:54.17:0,54,1518	0/0:32,0:32:50.68:0,51,1463	0/0:24,0:24:36.08:0,36,961	0/0:29,0:29:45.14:0,45,1272	1/1:23,0:28:24.05:805,24,0	1/1:16,0:16:15.05:603,15,0	1/1:21,5:27:25.83:720,26,0	1/1:16,7:25:51.17:1948,51,0	1/1:20,1:22:12.93:519,13,0	0/0:10,0:11:22.80:0,23,671	0/0:23,0:23:45.15:0,45,1314	0/0:31,0:31:63.22:0,63,1758	0/0:22,0:22:42.14:0,42,1226	1/1:30,6:38:36.10:1352,36,0	1/1:17,12:33:57.34:2567,57,0	1/1:6,0:6:3.01:41,3,0
chr10	86952288	.	CAAGA	C	1899.38	PASS	AB=0.973;AC=13;AF=0.241;AN=54;BaseQRankSum=5.195;DP=556;FS=0.000;HRun=0;HaplotypeScore=90.8314;InbreedingCoeff=0.8830;MQ=57.75;MQ0=15;MQRankSum=-0.168;QD=11.24;ReadPosRankSum=-0.291;VQSLOD=2.9445;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:41.63:0,42,890	0/0:6,0:6:18.02:0,18,370	0/0:43,0:15:30.24:0,30,441	0/1:35,0:8:0.21:0,0,114	0/0:25,0:24:42.14:0,42,944	0/0:19,0:17:45.15:0,45,1025	0/0:19,0:19:36.12:0,36,854	1/1:16,16:32:33.08:517,33,0	0/0:15,0:15:30.57:0,31,701	0/0:28,0:27:60.17:0,60,1388	0/0:14,0:14:39.13:0,39,896	0/0:15,0:14:30.08:0,30,661	0/0:14,0:14:27.37:0,27,582	0/0:16,0:15:30.10:0,30,693	0/0:20,0:20:39.13:0,39,881	0/0:19,0:19:26.78:0,27,547	0/0:28,0:26:46.03:0,46,1025	0/0:17,0:16:28.91:0,29,602	1/1:14,2:16:15.05:251,15,0	1/1:18,0:18:8.70:260,9,0	1/1:2,0:2:3.01:51,3,0	0/0:15,0:15:25.16:0,25,660	0/0:13,0:13:24.08:0,24,546	0/0:16,0:16:22:0,22,440	0/0:19,0:19:30.10:0,30,730	1/1:28,3:30:39.12:611,39,0	1/1:33,1:34:12.10:379,12,0	./.
chr10	86953005	.	A	AC	849.45	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-1.018;DP=437;FS=13.931;HRun=3;HaplotypeScore=60.4434;InbreedingCoeff=0.8392;MQ=61.57;MQ0=13;MQRankSum=3.381;QD=14.16;ReadPosRankSum=-0.080;VQSLOD=1.5779;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:19.55:0,20,173	1/1:3,1:4:10.77:89,11,0	0/0:26,0:9:4.10:0,4,48	0/0:16,0:6:4.61:0,5,54	0/0:20,0:20:44.17:0,44,401	0/0:11,0:11:20.85:0,21,189	0/0:15,0:14:41.83:0,42,401	0/0:12,0:12:32.66:0,33,259	0/0:12,0:11:20.90:0,21,174	1/1:6,14:20:40.38:429,40,0	1/1:3,13:16:27:334,27,0	0/0:12,0:11:23.89:0,24,204	0/0:9,0:9:26.88:0,27,240	0/0:11,0:11:29.10:0,29,248	0/0:19,0:19:36.26:0,36,398	0/0:11,0:11:27.05:0,27,285	1/1:3,17:19:9.58:149,10,0	0/0:23,0:24:58.75:0,59,496	0/0:14,0:11:26.92:0,27,217	0/0:15,0:15:32.83:0,33,264	0/0:9,0:8:23.93:0,24,200	0/0:6,1:7:10.93:0,11,110	0/0:10,0:10:26.86:0,27,229	0/0:16,0:15:4.79:0,5,174	0/0:20,0:20:55.12:0,55,516	0/0:25,0:25:65.79:0,66,556	0/0:21,0:21:62.61:0,63,507	0/0:6,0:4:9:0,9,79
chr10	86953008	.	CAA	C	1153.80	PASS	AB=0.636;AC=13;AF=0.232;AN=56;BaseQRankSum=-3.391;DP=436;FS=13.721;HRun=15;HaplotypeScore=65.2818;InbreedingCoeff=0.8632;MQ=62.57;MQ0=11;MQRankSum=-1.995;QD=11.54;ReadPosRankSum=-0.710;VQSLOD=0.8320;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:34:57.10:0,57,595	0/0:4,0:4:6.02:0,6,66	0/0:30,0:9:23.26:0,23,238	0/0:18,0:8:12.30:0,12,109	0/0:17,0:20:41.46:0,41,460	0/0:9,0:11:21:0,21,247	0/0:15,0:14:33:0,33,390	1/1:3,8:12:26.67:223,27,0	0/0:11,0:10:11.99:0,12,142	0/0:16,0:19:32.34:0,32,373	0/0:15,0:15:30.07:0,30,326	0/0:11,0:10:15.05:0,15,198	0/0:9,0:9:20.50:0,21,232	0/0:10,0:11:23.28:0,23,238	0/0:18,0:19:35.60:0,36,440	0/0:7,0:9:23.03:0,23,244	0/0:20,0:21:30.04:0,30,330	0/0:24,0:26:41.52:0,42,463	1/1:5,7:11:11.91:105,12,0	1/1:5,8:14:14.85:176,15,0	1/1:4,5:8:14.95:132,15,0	0/0:5,0:5:9.03:0,9,122	0/0:10,0:10:12.04:0,12,159	0/0:15,0:15:17.50:0,18,193	0/0:15,0:20:35.02:0,35,363	1/1:11,12:26:44.28:358,44,0	0/1:9,11:21:1.98:264,0,2	1/1:3,3:4:9:79,9,0
chr10	86953134	.	GAA	G	2874.22	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=1.711;DP=509;FS=7.128;HRun=12;HaplotypeScore=72.1395;InbreedingCoeff=0.9523;MQ=65.51;MQ0=19;MQRankSum=0.403;QD=18.54;ReadPosRankSum=2.324;VQSLOD=2.7302;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:54.23:0,54,297	0/0:2,0:9:14.39:0,14,50	0/0:14,0:12:25.47:0,25,208	0/0:10,0:8:15.04:0,15,182	0/0:22,0:20:44.55:0,45,559	0/0:21,0:25:62.92:0,63,837	0/0:16,0:19:50.09:0,50,646	1/1:6,17:23:50.71:493,51,0	0/0:20,0:19:47.12:0,47,612	0/0:1,0:15:35.20:0,35,134	0/0:5,1:17:0.71:0,1,88	0/0:16,0:15:30.02:0,30,448	0/0:8,0:8:21.07:0,21,313	0/0:13,0:14:32.55:0,33,423	0/0:18,0:17:48.16:0,48,714	0/0:12,0:12:27.09:0,27,402	0/0:9,0:26:32.93:0,33,127	1/1:5,28:31:66.14:670,66,0	1/1:3,12:15:29.99:298,30,0	1/1:2,9:11:20.96:199,21,0	1/1:6,18:21:39.03:397,39,0	0/0:13,0:15:35.56:0,36,457	0/0:16,0:16:44.36:0,44,616	0/0:27,0:25:69.23:0,69,1027	0/0:11,0:12:27.07:0,27,365	1/1:6,15:18:45.03:443,45,0	1/1:1,16:17:33.07:336,33,0	1/1:1,10:11:24.04:244,24,0
chr10	86953146	.	AT	A	606.78	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.557;DP=506;FS=4.708;HRun=1;HaplotypeScore=69.7131;InbreedingCoeff=0.7916;MQ=72.70;MQ0=6;MQRankSum=-1.725;QD=15.56;ReadPosRankSum=0.936;VQSLOD=3.5700;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:30:54.12:700,54,0	1/1:7,0:7:1.87:9,2,0	0/0:16,0:14:29.40:0,29,298	0/0:14,0:12:23.09:0,23,261	0/0:19,0:19:50.18:0,50,575	0/0:22,0:22:63.11:0,63,753	0/0:19,0:19:44.20:0,44,615	0/0:39,0:39:99:0,110,829	0/0:21,0:19:51.93:0,52,595	0/0:22,0:22:22.10:0,22,199	0/0:15,0:15:11.13:0,11,86	0/0:18,0:17:42.04:0,42,487	0/0:7,0:7:21.07:0,21,277	0/0:13,0:13:33.90:0,34,386	0/0:17,0:17:51.15:0,51,661	0/0:10,0:10:27.09:0,27,358	0/0:18,0:18:0.60:0,1,3	0/0:30,0:30:66.68:0,67,371	0/0:15,0:15:35.96:0,36,242	0/0:10,0:10:23.06:0,23,144	0/0:23,0:20:40.73:0,41,237	0/0:13,0:13:33.96:0,34,408	0/0:18,0:18:51.99:0,52,613	0/0:26,0:26:78.21:0,78,988	0/0:11,0:11:27.06:0,27,327	0/0:22,0:22:64.61:0,65,435	0/0:18,0:18:37.77:0,38,225	0/0:11,0:11:25.75:0,26,142
chr10	86954867	.	T	TAAA	2402.01	PASS	AB=0.803;AC=22;AF=0.407;AN=54;BaseQRankSum=2.042;DP=360;FS=12.659;HRun=14;HaplotypeScore=52.8943;InbreedingCoeff=0.7298;MQ=48.86;MQ0=37;MQRankSum=-5.004;QD=12.38;ReadPosRankSum=-2.614;VQSLOD=-0.5299;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:15:32.84:0,33,325	1/1:1,0:2:2.99:23,3,0	0/0:19,0:2:3.45:0,3,22	0/0:20,0:6:0.74:0,1,25	0/0:20,0:21:32.48:0,32,346	0/0:12,0:10:14.91:0,15,147	0/0:4,0:2:2.84:0,3,18	1/1:18,15:33:56.82:671,57,0	0/0:6,0:5:6.01:0,6,62	1/1:13,0:17:29.38:220,29,0	1/1:4,0:13:16.14:111,16,0	0/0:4,0:4:6.01:0,6,60	0/0:6,0:6:12.02:0,12,120	0/1:7,0:7:0:0,0,0	0/0:9,0:9:23.89:0,24,234	0/0:12,0:12:30.05:0,30,300	0/1:6,1:17:2.50:76,0,2	1/1:5,8:11:7.24:78,7,0	1/1:9,13:19:45.59:519,46,0	1/1:4,9:13:18.02:244,18,0	./.	0/0:3,0:3:8.74:0,9,67	0/0:8,0:7:5.85:0,6,61	0/0:4,0:4:12.03:0,12,122	0/0:17,0:17:38.95:0,39,388	1/1:7,1:7:12.50:157,13,0	1/1:3,9:14:18.04:274,18,0	1/1:4,8:12:15.03:222,15,0
chr10	86956155	.	T	TCCC	1580.98	PASS	AB=0.542;AC=13;AF=0.250;AN=52;BaseQRankSum=0.872;DP=415;FS=10.898;HRun=3;HaplotypeScore=66.2086;InbreedingCoeff=0.8399;MQ=39.29;MQ0=71;MQRankSum=-5.915;QD=18.38;ReadPosRankSum=-0.011;VQSLOD=-0.5435;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:55.38:0,55,757	0/0:3,0:3:9.03:0,9,142	./.	./.	0/0:19,0:19:36.06:0,36,539	0/0:13,0:13:27.07:0,27,384	0/0:8,0:8:24.08:0,24,374	1/1:3,9:12:33.11:625,33,0	0/0:9,0:9:24.06:0,24,349	0/0:15,0:14:36.08:0,36,560	0/0:8,0:8:9.03:0,9,132	0/0:11,0:11:33.11:0,33,483	0/0:10,0:10:27.03:0,27,367	0/0:16,0:16:39.10:0,39,590	0/0:16,0:15:36.05:0,36,444	0/0:17,0:17:48.11:0,48,699	0/0:21,0:21:33.83:0,34,478	0/0:9,0:9:12.04:0,12,175	1/1:12,0:10:18.60:122,19,0	1/1:18,0:18:31.19:199,31,0	1/1:10,0:9:16.17:102,16,0	0/0:13,0:12:33.11:0,33,505	0/0:9,0:9:18.06:0,18,279	0/0:11,0:11:13.14:0,13,189	0/0:14,0:14:24.08:0,24,364	0/1:2,11:13:10.93:473,0,11	1/1:17,0:17:12.97:139,13,0	1/1:4,0:2:6.02:99,6,0
chr10	86956323	.	CAT	C	1075.22	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.033;DP=610;FS=7.097;HRun=0;HaplotypeScore=73.8647;InbreedingCoeff=0.8833;MQ=59.38;MQ0=0;MQRankSum=-0.435;QD=28.30;ReadPosRankSum=0.820;VQSLOD=4.9772;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,33:38:90.29:1170,90,0	0/0:6,0:6:15.05:0,15,255	0/0:11,0:11:21.06:0,21,324	0/0:17,0:14:27.08:0,27,428	0/0:27,0:27:69.24:0,69,1166	0/0:16,1:17:6.13:0,6,648	0/0:19,0:19:51.17:0,51,863	0/0:34,0:34:87.29:0,87,1453	0/0:12,0:12:33.11:0,33,561	0/0:30,0:30:78.27:0,78,1325	0/0:18,0:18:48.16:0,48,816	0/0:17,0:17:45.14:0,45,735	0/0:15,0:15:36.09:0,36,557	0/0:25,0:25:60.19:0,60,994	0/0:30,0:29:69.23:0,69,1156	0/0:27,0:27:75.24:0,75,1249	0/0:22,0:22:54.18:0,54,918	0/0:31,0:31:84.29:0,84,1421	0/0:20,0:18:54.18:0,54,918	0/0:25,0:25:66.23:0,66,1122	0/0:39,0:39:99:0,105,1709	0/0:18,0:18:54.18:0,54,918	0/0:16,0:16:39.13:0,39,663	0/0:23,0:23:57.19:0,57,960	0/0:18,0:18:48.16:0,48,816	0/0:26,0:26:75.26:0,75,1275	0/0:22,0:22:57.20:0,57,968	0/0:7,0:7:18.06:0,18,306
chr10	86957033	.	A	AGCATAGCACTCTTT	26406.19	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-5.206;DP=518;FS=0.000;HRun=0;HaplotypeScore=190.3394;InbreedingCoeff=0.9925;MQ=82.92;MQ0=0;MQRankSum=-15.329;QD=163.00;ReadPosRankSum=-0.278;VQSLOD=4.9067;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,4231	1/1:1,6:8:24.08:1610,24,0	0/0:13,0:13:39.13:0,39,1438	0/0:24,0:24:68.43:0,68,2145	0/0:13,0:13:39.13:0,39,1514	0/0:23,0:23:66.23:0,66,2865	0/0:21,0:21:60.21:0,60,2550	1/1:13,4:21:63.16:3284,63,0	0/0:29,0:29:87.28:0,87,3434	1/1:3,12:17:51.16:3267,51,0	1/1:3,3:6:15.05:560,15,0	0/0:18,0:18:54.19:0,54,2281	0/0:19,0:19:57.20:0,57,2422	0/0:21,0:21:63.20:0,63,2639	0/0:27,0:27:81.23:0,81,3017	0/0:29,0:29:84.27:0,84,3410	1/1:7,11:19:49.45:3379,49,0	1/1:2,6:8:21.07:1481,21,0	1/1:5,3:10:27.09:1391,27,0	1/1:7,7:20:45.15:2771,45,0	1/1:9,5:15:36.08:1576,36,0	0/0:15,0:15:45.15:0,45,1971	0/0:20,0:20:60.21:0,60,2388	0/0:28,0:28:84.29:0,84,3641	0/0:20,0:20:60.18:0,60,2079	1/1:8,9:18:51.18:3256,51,0	1/1:2,12:16:45.15:2980,45,0	1/1:2,2:4:12.04:851,12,0
chr10	86957278	.	CT	C	3648.10	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.927;DP=539;FS=0.886;HRun=1;HaplotypeScore=54.6824;InbreedingCoeff=0.9971;MQ=82.06;MQ0=0;MQRankSum=-1.519;QD=40.53;ReadPosRankSum=3.158;VQSLOD=4.1751;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1574	1/1:0,9:9:27.09:377,27,0	0/0:10,0:10:29.92:0,30,419	0/0:20,0:20:54.01:0,54,810	0/0:13,0:13:39.13:0,39,621	0/0:17,0:17:51.15:0,51,790	0/0:21,0:21:57.19:0,57,909	0/0:30,0:30:90.30:0,90,1420	0/0:17,0:17:51.17:0,51,815	1/1:0,14:14:42.14:587,42,0	1/1:0,8:8:24.08:336,24,0	0/0:27,0:27:75.26:0,75,1196	0/0:20,0:20:57.19:0,57,905	0/0:17,0:17:51.17:0,51,803	0/0:16,0:16:45.14:0,45,695	0/0:21,0:21:63.21:0,63,1005	1/1:0,30:30:84.28:1174,84,0	1/1:0,29:29:84.28:1174,84,0	0/0:22,0:22:63.16:0,63,973	0/0:10,0:10:30.10:0,30,478	0/0:28,0:28:81.26:0,81,1270	0/0:10,0:10:30.08:0,30,454	0/0:25,0:25:75.20:0,75,1147	0/0:25,0:25:75.13:0,75,1089	0/0:16,0:16:48.16:0,48,766	0/0:20,1:21:18.25:0,18,869	0/0:17,0:17:51.15:0,51,769	0/0:12,0:12:36.12:0,36,575
chr10	86957376	.	C	CTT	4311.27	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-4.974;DP=534;FS=2.792;HRun=10;HaplotypeScore=74.0580;InbreedingCoeff=0.9781;MQ=71.09;MQ0=0;MQRankSum=-1.749;QD=25.07;ReadPosRankSum=-3.691;VQSLOD=4.0133;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:27:49.78:175,50,0	0/0:12,0:12:26.96:0,27,255	0/0:13,1:12:20.70:0,21,186	0/0:6,0:7:15.42:0,15,137	0/0:20,0:21:50.76:0,51,492	0/0:27,0:28:71.85:0,72,703	0/0:17,0:19:47.57:0,48,451	1/1:7,21:36:78.88:952,79,0	0/0:14,0:15:44.84:0,45,439	0/0:19,0:21:50.51:0,51,467	0/0:21,0:22:50.76:0,51,493	0/0:19,0:19:45.08:0,45,457	0/0:20,0:21:55.02:0,55,513	0/0:16,0:16:36.01:0,36,358	0/0:18,0:18:48.11:0,48,488	0/0:13,0:13:36.08:0,36,366	0/0:38,0:39:98.88:0,99,988	0/0:19,0:21:62.62:0,63,604	1/1:8,13:24:25.11:618,25,0	1/1:3,15:20:41.54:540,42,0	1/1:1,12:14:30.10:440,30,0	0/0:12,0:12:24.01:0,24,237	0/0:14,0:14:39.06:0,39,396	0/0:16,0:16:33.04:0,33,328	0/0:14,0:14:42.04:0,42,415	1/1:1,22:26:32.32:822,32,0	1/1:5,16:22:46.40:675,46,0	1/1:0,2:2:6.02:89,6,0
chr10	86958301	.	A	AC	13119.08	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-14.097;DP=646;FS=4.310;HRun=2;HaplotypeScore=60.7318;InbreedingCoeff=0.9992;MQ=87.35;MQ0=0;MQRankSum=-0.272;QD=43.73;ReadPosRankSum=1.111;VQSLOD=4.4511;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,39:40:93.65:1571,94,0	1/1:0,10:10:27.09:431,27,0	0/0:20,1:21:49.96:0,50,617	0/0:24,0:24:66.18:0,66,884	0/0:18,0:18:54.18:0,54,752	0/0:30,0:30:87.21:0,87,1173	0/0:19,0:19:57.17:0,57,779	1/1:1,29:30:87.27:1339,87,0	0/0:23,0:23:66.18:0,66,872	1/1:3,29:32:90.31:1420,90,0	1/1:0,28:28:75.26:1192,75,0	0/0:18,0:18:54.17:0,54,739	0/0:30,0:30:90.25:0,90,1204	0/0:19,0:19:57.17:0,57,777	0/0:32,0:32:93.28:0,93,1264	0/0:28,0:28:81.27:0,81,1131	1/1:0,23:23:69.23:1090,69,0	1/1:0,23:23:63.21:993,63,0	1/1:0,19:19:57.19:899,57,0	1/1:0,13:13:30.10:479,30,0	1/1:0,26:26:75.26:1198,75,0	0/0:18,0:18:54.17:0,54,738	0/0:20,0:20:57.19:0,57,794	0/0:26,0:25:78.26:0,78,1090	0/0:20,0:20:60.19:0,60,821	1/1:0,20:20:57.15:878,57,0	1/1:0,29:29:81.28:1293,81,0	1/1:0,7:7:21.07:335,21,0
chr10	86958512	.	TC	T	1122.07	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.072;DP=676;FS=0.000;HRun=1;HaplotypeScore=61.7939;InbreedingCoeff=0.9993;MQ=81.98;MQ0=0;MQRankSum=-2.960;QD=35.06;ReadPosRankSum=1.664;VQSLOD=3.5820;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:87.29:1217,87,0	0/0:14,0:14:42.14:0,42,670	0/0:24,0:23:69.23:0,69,1077	0/0:13,0:13:39.13:0,39,621	0/0:27,0:27:81.28:0,81,1291	0/0:36,0:36:99:0,108,1680	0/0:18,0:18:54.18:0,54,863	0/0:35,0:35:99:0,105,1635	0/0:25,0:25:75.23:0,75,1170	0/0:26,0:26:75.25:0,75,1179	0/0:25,0:25:75.26:0,75,1199	0/0:25,0:25:75.23:0,75,1153	0/0:22,0:22:66.20:0,66,1027	0/0:22,0:22:66.21:0,66,1032	0/0:22,0:22:66.23:0,66,1055	0/0:27,0:27:81.26:0,81,1270	0/0:33,0:33:99:0,99,1583	0/0:11,0:11:30.10:0,30,475	0/0:14,0:14:42.12:0,42,639	0/0:34,0:34:99:0,102,1631	0/0:29,0:29:84.27:0,84,1315	0/0:21,0:21:63.21:0,63,996	0/0:14,0:14:42.14:0,42,671	0/0:14,0:14:42.14:0,42,668	0/0:21,0:21:63.21:0,63,1005	0/0:37,0:37:99:0,111,1776	0/0:38,0:38:99:0,114,1823	0/0:17,0:17:51.17:0,51,815
chr10	86959136	.	CG	C	2035.24	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=9.869;DP=322;FS=10.778;HRun=8;HaplotypeScore=46.1756;InbreedingCoeff=0.9345;MQ=72.23;MQ0=1;MQRankSum=-0.702;QD=19.02;ReadPosRankSum=0.785;VQSLOD=2.3018;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:17:31.80:0,32,186	1/1:0,3:3:6.01:58,6,0	0/0:9,0:9:20.56:0,21,191	0/0:8,0:6:11.97:0,12,123	0/0:10,0:10:24.07:0,24,290	0/0:13,0:13:39.12:0,39,471	0/0:29,0:29:75.20:0,75,892	1/1:4,4:8:14.97:139,15,0	0/0:8,0:8:18.06:0,18,217	1/1:1,3:4:9.01:81,9,0	1/1:0,2:2:6.01:58,6,0	0/0:20,0:20:51.16:0,51,616	0/0:11,0:11:30.07:0,30,339	0/0:21,0:21:60.15:0,60,699	0/0:12,0:12:30.08:0,30,354	0/0:8,0:8:24.07:0,24,290	1/1:1,6:7:15.02:141,15,0	1/1:2,11:13:27.04:261,27,0	1/1:0,5:5:14.96:129,15,0	1/1:1,6:7:13.80:112,14,0	1/1:6,26:32:68.94:650,69,0	0/0:5,0:5:9.03:0,9,109	0/0:8,0:8:18.06:0,18,217	0/0:22,0:22:57.17:0,57,688	0/0:13,0:12:33.10:0,33,398	1/1:0,8:8:21.03:200,21,0	1/1:1,10:11:26.09:255,26,0	1/1:1,6:7:18.03:173,18,0
chr10	86959893	.	GA	G	885.15	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.432;DP=614;FS=10.381;HRun=10;HaplotypeScore=103.9072;InbreedingCoeff=0.9214;MQ=54.07;MQ0=28;MQRankSum=-4.736;QD=10.93;ReadPosRankSum=2.958;VQSLOD=2.0438;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:8.67:0,9,53	1/1:2,6:8:4.40:103,4,0	0/0:66,0:15:24.99:0,25,220	0/0:55,0:11:10.99:0,11,88	0/0:24,0:23:65.97:0,66,758	0/0:7,0:7:17.92:0,18,195	0/0:18,0:18:43.03:0,43,479	0/0:23,0:22:54.05:0,54,572	0/0:14,0:14:37.67:0,38,438	1/1:11,15:23:39.95:311,40,0	1/1:6,7:13:26.34:163,26,0	0/0:21,0:21:57.11:0,57,650	0/0:6,0:6:15.03:0,15,161	0/0:15,0:13:29.81:0,30,287	0/0:14,0:14:42.12:0,42,493	0/0:18,0:17:45.11:0,45,519	1/1:11,22:32:69.73:460,70,0	0/0:38,0:37:89.48:0,89,1061	0/0:22,0:22:57.03:0,57,639	0/0:22,0:21:54.07:0,54,587	0/0:13,0:13:30.04:0,30,322	0/0:9,0:9:22.63:0,23,218	0/0:12,0:11:24.04:0,24,266	0/0:26,0:25:66.13:0,66,729	0/0:19,0:19:41.97:0,42,449	0/0:21,0:21:59.99:0,60,638	0/0:28,0:27:72:0,72,746	0/0:9,0:8:18.04:0,18,194
chr10	86959900	.	AAT	A	2367.05	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.204;DP=643;FS=11.718;HRun=0;HaplotypeScore=110.3856;InbreedingCoeff=0.9565;MQ=54.10;MQ0=27;MQRankSum=-5.213;QD=27.21;ReadPosRankSum=2.112;VQSLOD=4.4956;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:24.52:0,25,117	1/1:8,0:8:6.67:262,7,0	0/0:78,0:18:29.64:0,30,334	0/0:67,0:15:12.11:0,12,137	0/0:23,0:23:69.22:0,69,1262	0/0:8,0:8:21.04:0,21,334	0/0:18,0:18:46.79:0,47,834	0/0:23,0:22:62.37:0,62,853	0/0:14,0:14:42.13:0,42,750	1/1:30,3:30:48.77:857,49,0	1/1:14,0:13:27.05:360,27,0	0/0:20,0:20:57.18:0,57,1019	0/0:6,0:6:15.04:0,15,248	0/0:13,0:11:30.03:0,30,447	0/0:15,0:15:45.12:0,45,792	0/0:19,0:18:51.16:0,51,896	1/1:28,4:31:75.13:1042,75,0	0/0:38,0:38:55.70:0,56,1412	0/0:24,0:24:62.83:0,63,983	0/0:22,0:21:59.20:0,59,893	0/0:11,0:11:30.10:0,30,495	0/0:9,0:9:24.08:0,24,418	0/0:10,0:10:27.07:0,27,434	0/0:26,0:26:72.17:0,72,1179	0/0:19,0:19:48.06:0,48,776	0/0:24,0:24:66.68:0,67,985	0/0:28,0:27:72.22:0,72,1106	0/0:9,0:8:20.86:0,21,294
chr10	86959903	.	TTAA	T	2906.58	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=6.831;DP=642;FS=5.384;HRun=0;HaplotypeScore=116.7049;InbreedingCoeff=0.8815;MQ=54.27;MQ0=26;MQRankSum=-4.364;QD=15.80;ReadPosRankSum=2.530;VQSLOD=3.3140;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,2:28:54.36:394,54,0	1/1:0,6:7:21.07:293,21,0	0/0:81,0:19:32.05:0,32,421	0/1:67,0:15:4.64:5,0,189	0/0:25,0:25:72.23:0,72,1658	0/0:8,0:8:21.07:0,21,448	0/0:20,0:20:59.72:0,60,1142	0/0:22,0:21:26.51:0,27,131	0/0:14,0:14:42.12:0,42,898	1/1:8,25:30:37.58:1027,38,0	1/1:6,7:14:30.04:372,30,0	0/0:20,0:20:57.12:0,57,1132	0/0:5,0:5:15.04:0,15,272	0/0:11,0:9:24.01:0,24,482	0/0:15,0:15:45.13:0,45,910	0/0:19,0:18:51.13:0,51,1009	1/1:11,21:31:74.64:991,75,0	0/0:37,0:37:66.80:0,67,396	0/0:24,0:24:37.04:0,37,155	0/0:22,0:21:15.86:0,16,100	0/0:11,0:11:14.20:0,14,109	0/0:11,0:11:30.10:0,30,622	0/0:12,0:12:30.09:0,30,583	0/0:23,0:23:63.19:0,63,1332	0/0:18,0:18:45.14:0,45,998	0/0:24,0:24:30.02:0,30,139	0/0:27,0:26:34.46:0,34,221	0/0:9,0:8:6.29:0,6,19
chr10	86959904	.	TAAAA	T	4776.47	PASS	AB=0.951;AC=19;AF=0.339;AN=56;BaseQRankSum=4.066;DP=646;FS=3.382;HRun=13;HaplotypeScore=120.3913;InbreedingCoeff=0.7143;MQ=54.16;MQ0=26;MQRankSum=-6.471;QD=21.32;ReadPosRankSum=0.890;VQSLOD=3.6929;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:54.14:0,54,403	1/1:7,0:7:9.34:86,9,0	0/0:79,0:19:0.76:0,1,292	0/0:68,0:16:14.19:0,14,157	0/0:26,0:26:72.25:0,72,1706	0/0:10,0:10:27.09:0,27,539	0/0:20,0:20:54.18:0,54,1156	1/1:4,18:21:51.12:725,51,0	0/0:14,0:14:36.12:0,36,847	0/1:33,0:30:62.95:71,0,63	0/1:14,0:14:20.45:58,0,20	0/0:17,0:20:51.16:0,51,1079	0/0:5,0:5:12.04:0,12,253	0/0:10,0:9:21.07:0,21,459	0/0:14,0:15:39.13:0,39,831	0/0:17,0:17:42.13:0,42,929	0/1:29,0:31:7.27:82,0,7	0/0:7,0:37:76.84:0,77,469	1/1:1,22:23:60.02:842,60,0	1/1:2,20:21:54.16:780,54,0	1/1:4,7:11:21.02:300,21,0	0/0:12,0:12:33.11:0,33,672	0/0:11,0:12:27.09:0,27,609	0/0:20,0:23:60.19:0,60,1286	0/0:16,0:18:42.14:0,42,967	1/1:2,22:24:21.76:907,22,0	1/1:7,19:26:9.24:619,9,0	1/1:1,7:8:21.07:307,21,0
chr10	86960808	.	GGT	G	195.85	PASS	AB=1.000;AC=15;AF=0.375;AN=40;BaseQRankSum=0.017;DP=71;FS=11.761;HRun=0;HaplotypeScore=27.4217;InbreedingCoeff=0.4572;MQ=88.44;MQ0=3;MQRankSum=-2.308;QD=7.53;ReadPosRankSum=1.522;VQSLOD=1.4249;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:17.04:0,17,142	./.	0/0:6,0:5:11.90:0,12,87	0/0:8,0:4:9.01:0,9,89	./.	0/0:1,0:1:3.01:0,3,51	0/0:5,0:5:12.03:0,12,176	1/1:5,1:6:11.87:130,12,0	0/0:1,0:1:3.01:0,3,51	./.	1/1:2,0:2:3:25,3,0	0/0:1,0:1:3.01:0,3,47	0/0:1,0:1:3.01:0,3,50	./.	0/0:2,0:2:6.01:0,6,75	./.	1/1:0,1:1:3.01:36,3,0	0/0:2,0:2:3.01:0,3,38	./.	0/1:4,0:4:0:0,0,0	1/1:4,1:5:3:26,3,0	./.	./.	0/0:2,0:2:2.97:0,3,20	0/0:2,0:2:3:0,3,50	1/1:3,0:2:3.01:30,3,0	1/1:2,1:3:3.01:43,3,0	1/1:1,1:2:3.01:31,3,0
chr10	86960824	.	TG	T	301.69	PASS	AB=1.000;AC=19;AF=0.528;AN=36;BaseQRankSum=3.981;DP=72;FS=21.416;HRun=8;HaplotypeScore=20.0076;InbreedingCoeff=0.5717;MQ=84.94;MQ0=3;MQRankSum=-2.708;QD=7.18;ReadPosRankSum=0.704;VQSLOD=-0.3450;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:6:4.07:12,4,0	1/1:1,0:1:3:28,3,0	0/0:5,0:4:8.05:0,8,75	0/1:7,0:3:0:0,0,0	./.	0/0:6,0:6:12.02:0,12,132	0/0:4,0:4:12.04:0,12,145	1/1:2,4:6:14.92:137,15,0	0/0:1,0:1:3.01:0,3,36	1/1:1,2:3:3:29,3,0	1/1:2,4:6:7.90:45,8,0	./.	0/0:1,0:1:3.01:0,3,36	./.	./.	./.	1/1:2,2:4:6:55,6,0	./.	./.	./.	1/1:3,0:3:3:29,3,0	0/0:1,0:1:3.01:0,3,36	./.	0/0:3,0:3:9.03:0,9,106	0/0:4,0:4:12.04:0,12,145	1/1:3,2:4:8.88:73,9,0	1/1:1,0:1:3:28,3,0	./.
chr10	86961181	.	A	AAAG	1940.53	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=-1.195;DP=503;FS=6.827;HRun=0;HaplotypeScore=76.8712;InbreedingCoeff=0.5840;MQ=46.74;MQ0=25;MQRankSum=-0.256;QD=8.02;ReadPosRankSum=-2.370;VQSLOD=1.0743;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:30:5.63:168,6,0	1/1:0,2:2:3.01:58,3,0	0/1:26,0:3:0.78:1,0,17	0/0:21,0:5:6.22:0,6,57	0/0:17,0:16:27.87:0,28,263	0/0:20,0:20:44.98:0,45,496	0/0:16,0:14:36.76:0,37,390	0/1:33,0:31:97.22:97,0,166	0/0:15,0:15:29.28:0,29,317	1/1:21,6:25:48.67:736,49,0	1/1:12,0:10:3.22:141,3,0	0/0:12,0:12:34.48:0,34,331	0/0:17,0:15:29.81:0,30,341	0/0:21,0:20:47.62:0,48,471	0/0:23,0:23:59.90:0,60,627	0/0:17,0:17:29.75:0,30,293	1/1:16,3:18:36.35:376,36,0	0/0:21,0:20:22.47:0,22,189	1/1:11,0:10:5.33:120,5,0	0/1:18,0:15:24.59:25,0,85	1/1:4,0:3:2.98:25,3,0	0/0:13,0:12:32.85:0,33,309	0/0:15,0:14:23.80:0,24,271	0/0:20,0:19:33.08:0,33,406	0/0:13,0:11:23.86:0,24,212	0/1:26,0:23:36.83:37,0,96	1/1:21,0:22:9.32:271,9,0	1/1:8,0:6:10.48:75,10,0
chr10	86961191	.	GA	G	350.32	PASS	AB=0.840;AC=8;AF=0.143;AN=56;BaseQRankSum=3.234;DP=508;FS=1.386;HRun=13;HaplotypeScore=69.0451;InbreedingCoeff=0.4162;MQ=51.31;MQ0=19;MQRankSum=2.149;QD=3.69;ReadPosRankSum=-1.965;VQSLOD=0.2578;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,1:33:1.05:0,1,84	1/1:4,0:4:2.94:22,3,0	0/1:33,1:6:7.04:7,0,33	0/0:26,0:8:3.67:0,4,37	0/0:13,0:16:23.85:0,24,209	0/0:16,0:18:28.96:0,29,281	0/0:13,0:12:8.97:0,9,78	0/0:29,1:30:44.88:0,45,310	0/0:17,0:17:23.07:0,23,210	1/1:24,2:27:8.42:189,8,0	1/1:3,8:10:17.52:122,18,0	0/0:13,0:13:23.85:0,24,198	0/0:15,0:14:12.01:0,12,110	0/0:19,1:19:20.11:0,20,346	0/0:20,0:20:1.95:0,2,154	0/0:18,0:18:11.64:0,12,81	0/1:10,7:15:16.09:143,0,16	0/0:18,0:17:20.06:0,20,110	0/0:15,1:15:19.48:0,19,322	0/0:14,0:12:26.57:0,27,190	0/0:4,0:3:3:0,3,29	0/0:12,1:12:0.04:0,0,127	0/0:15,0:14:23.65:0,24,200	0/0:21,1:21:13.93:0,14,275	0/0:15,0:15:21.03:0,21,204	0/0:22,0:20:37.16:0,37,304	0/0:24,1:25:15.72:0,16,248	0/0:6,0:5:9.01:0,9,88
chr10	86961192	.	A	AAAAG	2327.70	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=-1.106;DP=515;FS=2.088;HRun=0;HaplotypeScore=89.3224;InbreedingCoeff=0.4277;MQ=51.39;MQ0=19;MQRankSum=-2.358;QD=9.24;ReadPosRankSum=1.090;VQSLOD=2.6635;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:33:34.40:355,34,0	1/1:4,0:4:5.96:53,6,0	0/1:35,0:6:12.15:12,0,25	0/0:27,0:9:5.86:0,6,75	0/0:17,0:17:29.97:0,30,379	0/0:18,0:18:44.14:0,44,582	0/0:13,0:12:27.21:0,27,242	0/1:31,0:31:99:99,0,147	0/0:17,0:17:38.90:0,39,454	1/1:13,16:29:64.81:822,65,0	1/1:12,1:11:6.28:272,6,0	0/0:12,0:12:30:0,30,361	0/0:15,0:14:26.28:0,26,225	0/0:20,0:19:46.47:0,46,615	0/0:20,0:20:16.90:0,17,362	0/0:18,0:18:35.39:0,35,246	1/1:16,1:15:24.52:434,25,0	1/1:16,1:16:9.21:178,9,0	0/1:17,0:15:3.09:3,0,182	0/0:14,0:12:1.79:0,2,69	0/0:5,0:4:1.79:0,2,5	0/0:13,0:12:29.60:0,30,312	0/0:15,0:14:26.56:0,27,339	0/0:22,0:21:43.32:0,43,453	0/0:17,0:16:35.83:0,36,351	0/1:22,0:20:32.06:32,0,146	0/1:25,0:25:59.22:204,0,59	0/1:6,0:5:30.94:43,0,31
chr10	86961193	.	A	AAAG	1494.47	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=1.125;DP=523;FS=1.019;HRun=0;HaplotypeScore=85.1862;InbreedingCoeff=0.2826;MQ=51.55;MQ0=19;MQRankSum=-2.887;QD=7.36;ReadPosRankSum=3.031;VQSLOD=1.9693;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,24:33:26.35:487,26,0	0/1:5,0:5:22.96:23,0,25	0/0:35,0:6:10.08:0,10,80	0/0:27,0:9:2.22:0,2,29	0/0:18,0:18:32.93:0,33,399	0/0:19,0:19:21.81:0,22,543	0/0:14,0:13:27.62:0,28,239	0/1:31,0:31:59.87:60,0,197	0/0:16,0:16:38.96:0,39,493	1/1:30,0:29:40.32:455,40,0	0/1:13,0:11:36.51:83,0,37	0/0:13,0:13:30:0,30,364	0/0:15,0:14:26.29:0,26,233	0/0:20,0:19:48.06:0,48,650	0/0:20,0:20:38.12:0,38,378	0/0:18,0:18:35.26:0,35,261	0/1:17,0:15:2.49:149,0,2	1/1:5,13:17:9.20:271,9,0	0/0:17,0:15:35.31:0,35,368	0/0:14,0:12:5.28:0,5,138	0/0:5,0:4:8.87:0,9,58	0/0:14,0:13:32.80:0,33,351	0/0:15,0:14:26.75:0,27,338	0/0:22,0:21:49.75:0,50,531	0/0:18,0:17:38.98:0,39,453	0/1:22,0:20:20.89:21,0,282	0/1:25,0:25:77.11:77,0,133	0/1:7,0:6:35.03:35,0,71
chr10	86961882	.	C	CA	3052.39	PASS	AB=0.699;AC=24;AF=0.429;AN=56;BaseQRankSum=0.926;DP=570;FS=1.287;HRun=11;HaplotypeScore=92.1553;InbreedingCoeff=0.7180;MQ=64.66;MQ0=4;MQRankSum=-6.118;QD=10.82;ReadPosRankSum=-3.296;VQSLOD=2.6076;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,6:26:44.97:401,45,0	1/1:9,0:9:8.66:47,9,0	0/0:26,0:15:0.98:0,1,99	0/1:19,0:13:2.15:2,0,14	0/0:33,0:34:85.45:0,85,655	0/0:17,0:17:32.81:0,33,253	0/0:13,0:13:7.68:0,8,224	1/1:9,15:23:35.97:345,36,0	0/0:15,0:16:37.88:0,38,284	1/1:26,0:26:21.85:100,22,0	1/1:25,0:23:36.62:208,37,0	0/0:22,0:22:56.72:0,57,435	0/0:24,0:25:58.78:0,59,447	0/0:16,0:16:38.84:0,39,302	0/0:17,0:17:41.82:0,42,325	0/0:18,0:19:49.67:0,50,374	1/1:14,0:14:15.08:77,15,0	1/1:10,9:19:24.83:403,25,0	0/1:7,9:15:19.41:186,0,19	1/1:4,20:25:40.87:398,41,0	1/1:2,13:15:24.01:232,24,0	0/0:16,0:17:43.85:0,44,329	0/0:22,0:22:35.73:0,36,276	0/0:18,0:19:55.83:0,56,424	0/0:22,0:23:43.77:0,44,331	0/1:10,14:22:9.50:398,0,10	0/1:8,16:24:1.39:342,0,1	1/1:0,9:9:12.02:122,12,0
chr10	86961900	.	GAAGAA	G	777.72	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.724;DP=602;FS=0.000;HRun=0;HaplotypeScore=110.7499;InbreedingCoeff=0.8438;MQ=54.28;MQ0=10;MQRankSum=-4.199;QD=15.55;ReadPosRankSum=0.168;VQSLOD=2.7540;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,15:32:36.05:537,36,0	0/0:8,0:8:15.05:0,15,288	0/0:45,0:12:12.19:0,12,177	0/0:60,0:13:3.25:0,3,182	0/0:31,0:31:48.13:0,48,1197	0/0:15,0:15:42.09:0,42,1011	0/0:17,0:17:39.09:0,39,1022	0/0:23,0:22:51.14:0,51,912	0/0:16,0:16:42.14:0,42,1023	0/0:21,0:21:36.06:0,36,806	0/0:21,0:19:27.09:0,27,693	0/0:21,0:21:48.12:0,48,1147	0/0:23,0:23:45.15:0,45,1208	0/0:13,0:13:27.09:0,27,771	0/0:20,0:20:54.17:0,54,1368	0/0:18,0:18:36.11:0,36,971	0/0:16,0:16:29.99:0,30,511	1/1:18,0:18:9.99:355,10,0	0/0:14,0:13:18.06:0,18,508	0/0:24,0:23:57.20:0,57,1457	0/0:13,0:13:21.07:0,21,470	0/0:15,0:15:33.09:0,33,749	0/0:22,0:22:57.18:0,57,1547	0/0:21,0:20:42.14:0,42,1153	0/0:23,0:23:60.20:0,60,1519	0/0:25,0:23:57.20:0,57,1514	0/0:18,0:18:36.12:0,36,1016	0/0:7,0:7:9.01:0,9,166
chr10	86961949	.	GA	G	1121.68	PASS	AB=0.981;AC=9;AF=0.161;AN=56;BaseQRankSum=7.828;DP=566;FS=1.937;HRun=7;HaplotypeScore=75.2510;InbreedingCoeff=0.9247;MQ=69.99;MQ0=11;MQRankSum=-1.060;QD=10.48;ReadPosRankSum=2.675;VQSLOD=1.9345;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:71.94:0,72,806	1/1:0,9:9:24:233,24,0	0/0:54,0:27:44.30:0,44,392	0/1:51,1:17:0.38:0,0,173	0/0:18,0:18:51.15:0,51,629	0/0:21,0:21:57.08:0,57,670	0/0:16,0:16:45.10:0,45,525	0/0:27,0:27:46.25:0,46,531	0/0:10,0:10:30.10:0,30,377	1/1:2,16:18:42.04:406,42,0	1/1:2,9:11:24.05:245,24,0	0/0:18,0:18:51.16:0,51,640	0/0:12,0:12:27.08:0,27,326	0/0:21,0:21:54.17:0,54,678	0/0:20,0:20:58.05:0,58,691	0/0:19,0:19:54.16:0,54,667	1/1:3,13:16:38.92:397,39,0	0/0:17,0:17:39.54:0,40,473	0/0:25,0:25:69.18:0,69,819	0/0:19,0:19:45.51:0,46,517	0/0:15,0:15:30.55:0,31,364	0/0:11,0:11:24.07:0,24,290	0/0:19,0:19:27.09:0,27,340	0/0:15,0:14:39.11:0,39,477	0/0:19,0:19:45.13:0,45,551	0/0:21,0:21:60.18:0,60,734	0/0:13,0:13:36.07:0,36,412	0/0:10,0:10:24.06:0,24,287
chr10	86962234	.	AT	A	545.79	PASS	AB=0.875;AC=5;AF=0.093;AN=54;BaseQRankSum=2.822;DP=316;FS=3.747;HRun=9;HaplotypeScore=51.2056;InbreedingCoeff=0.6252;MQ=77.16;MQ0=9;MQRankSum=-2.496;QD=13.64;ReadPosRankSum=1.547;VQSLOD=3.3329;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:36.02:327,36,0	0/0:5,0:5:15.02:0,15,157	0/0:41,0:22:21.03:0,21,333	0/0:31,0:12:8.78:0,9,155	0/0:15,0:14:38.41:0,38,390	0/0:17,0:15:38.97:0,39,381	0/0:7,0:7:18.03:0,18,195	0/0:19,0:19:42.09:0,42,456	0/0:4,0:4:5.75:0,6,46	0/0:13,0:13:30.09:0,30,345	0/0:6,0:6:9.03:0,9,104	0/0:4,0:4:12.04:0,12,138	0/0:5,0:5:15.04:0,15,173	0/0:4,0:4:11.40:0,11,112	0/0:6,0:6:15.04:0,15,168	0/0:10,0:10:26.55:0,27,275	0/0:17,0:17:45.11:0,45,505	1/1:1,15:16:37.84:334,38,0	0/0:13,0:13:36.07:0,36,387	0/0:6,0:6:16.25:0,16,159	0/0:8,0:8:15.03:0,15,163	./.	0/1:6,1:7:9.33:9,0,155	0/0:2,0:2:2.99:0,3,24	0/0:9,0:9:24.05:0,24,263	0/0:14,0:14:39.11:0,39,447	0/0:8,0:8:15.32:0,15,147	0/0:9,0:9:26.11:0,26,283
chr10	86963387	.	GTT	G	1944.87	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.471;DP=508;FS=15.712;HRun=9;HaplotypeScore=64.5485;InbreedingCoeff=0.9305;MQ=57.96;MQ0=2;MQRankSum=0.727;QD=24.62;ReadPosRankSum=1.620;VQSLOD=1.5106;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.11:0,69,688	1/1:0,7:7:15.04:175,15,0	0/0:8,0:6:6.02:0,6,99	0/0:12,1:5:10.27:0,10,119	0/0:24,0:24:66.17:0,66,1030	0/0:24,0:24:60.15:0,60,933	0/0:11,0:11:24.08:0,24,392	0/0:32,0:28:72.25:0,72,1180	0/0:24,0:24:63.22:0,63,1034	1/1:5,28:32:78.18:886,78,0	1/1:2,15:16:36.09:419,36,0	0/0:16,0:16:42.14:0,42,689	0/0:14,0:14:39.13:0,39,640	0/0:10,0:10:30.10:0,30,492	0/0:20,0:20:42.14:0,42,689	0/0:25,0:26:71.70:0,72,1070	1/1:2,20:22:54.15:623,54,0	0/0:27,0:27:69.15:0,69,726	0/0:16,0:16:39.13:0,39,639	0/0:19,0:19:54.18:0,54,884	0/0:7,0:7:15.05:0,15,246	0/0:7,0:7:15.05:0,15,246	0/0:10,0:10:27.09:0,27,443	0/0:8,0:7:8.99:0,9,118	0/0:14,0:14:39.13:0,39,640	0/0:25,1:26:28.20:0,28,899	0/0:32,0:32:93.30:0,93,1477	0/0:15,0:15:39.12:0,39,611
chr10	86963396	.	T	TA	1641.52	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.651;DP=474;FS=14.293;HRun=2;HaplotypeScore=51.5167;InbreedingCoeff=0.8454;MQ=57.70;MQ0=8;MQRankSum=0.293;QD=30.40;ReadPosRankSum=2.006;VQSLOD=1.8928;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:69.18:909,69,0	0/0:9,0:9:17.51:0,18,105	0/0:6,0:2:6.01:0,6,66	0/0:11,0:3:4.14:0,4,41	0/0:22,0:22:60.17:0,60,721	0/0:20,0:20:60.11:0,60,707	0/0:8,0:8:21.07:0,21,258	0/0:33,0:27:75.19:0,75,896	0/0:23,0:23:66.20:0,66,801	0/0:29,0:28:75.62:0,76,433	0/0:15,0:14:34.78:0,35,188	0/0:14,0:14:39.11:0,39,466	0/0:13,0:13:39.12:0,39,479	0/0:12,0:12:33.09:0,33,393	0/0:14,0:14:39.12:0,39,479	0/0:22,0:22:60.07:0,60,705	0/0:24,0:24:60.69:0,61,368	1/1:1,26:27:63.21:854,63,0	0/0:17,0:14:42.09:0,42,490	0/0:18,0:18:51.15:0,51,614	0/0:7,0:7:21.04:0,21,233	0/0:6,0:6:15.05:0,15,183	0/0:9,0:9:24.08:0,24,295	0/0:5,0:4:8.94:0,9,91	0/0:13,0:13:36.11:0,36,442	0/0:22,0:22:63.07:0,63,732	0/0:34,0:34:99:0,102,1183	0/0:14,0:14:42.11:0,42,493
chr10	86963947	.	CA	C	411.46	PASS	AB=0.867;AC=6;AF=0.107;AN=56;BaseQRankSum=6.754;DP=442;FS=19.706;HRun=13;HaplotypeScore=52.3154;InbreedingCoeff=0.4515;MQ=62.42;MQ0=20;MQRankSum=0.006;QD=5.71;ReadPosRankSum=2.397;VQSLOD=0.5911;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,19:29:31.93:369,32,0	0/0:9,0:9:20.14:0,20,228	0/0:13,0:6:8.69:0,9,63	0/0:12,0:9:6.04:0,6,77	0/0:15,1:19:7.68:0,8,189	0/0:17,0:17:20.57:0,21,343	0/0:11,1:12:32.87:0,33,299	0/0:28,1:29:43.90:0,44,537	0/0:9,0:8:19.81:0,20,171	0/0:22,2:21:1.24:0,1,322	0/0:22,0:22:50.93:0,51,454	0/0:15,0:16:26.18:0,26,280	0/0:13,0:11:23.72:0,24,212	0/0:12,0:12:15.02:0,15,146	0/0:12,1:14:10.57:0,11,235	0/0:12,0:11:20.87:0,21,189	0/0:21,1:17:22.82:0,23,356	1/1:6,8:13:22.40:143,22,0	0/0:19,2:20:29.07:0,29,424	0/1:11,2:11:22.83:23,0,115	0/1:11,2:13:7.77:8,0,253	0/0:7,0:7:12.02:0,12,117	0/0:7,0:7:15.02:0,15,146	0/0:15,0:11:6.92:0,7,177	0/0:14,0:12:23.85:0,24,211	0/0:19,2:20:2.64:0,3,361	0/0:16,1:16:14.14:0,14,293	0/0:6,0:6:14.89:0,15,131
chr10	86964153	.	A	AT	303.94	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.194;DP=626;FS=5.376;HRun=7;HaplotypeScore=60.1909;InbreedingCoeff=0.9771;MQ=71.63;MQ0=0;MQRankSum=-1.055;QD=23.38;ReadPosRankSum=-0.269;VQSLOD=3.4463;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,100,981	0/0:8,0:8:24.04:0,24,231	0/0:16,0:16:19.78:0,20,194	0/0:17,0:18:15.95:0,16,309	0/0:26,0:26:66.07:0,66,625	0/0:17,0:17:45.07:0,45,435	0/0:13,0:13:33:0,33,304	0/0:38,0:38:90.13:0,90,869	0/0:21,0:21:57.07:0,57,545	0/0:28,0:28:66.08:0,66,626	0/0:32,0:32:87.11:0,87,830	0/0:21,0:21:57.08:0,57,547	0/0:11,0:11:24:0,24,219	0/0:14,0:14:36.05:0,36,343	0/0:27,0:27:75.11:0,75,721	0/0:19,0:19:51.07:0,51,487	0/0:20,0:20:45.04:0,45,427	1/1:1,12:13:33.10:399,33,0	0/0:22,0:22:56.99:0,57,525	0/0:18,0:18:51.07:0,51,488	0/0:21,0:21:51.07:0,51,488	0/0:11,0:11:33.04:0,33,313	0/0:30,0:30:84.11:0,84,805	0/0:17,0:17:36.05:0,36,348	0/0:23,0:23:63.09:0,63,605	0/0:42,0:42:99:0,120,1144	0/0:37,0:37:99:0,108,1036	0/0:23,0:23:54.08:0,54,521
chr10	86964553	.	CT	C	134.47	PASS	AB=0.800;AC=3;AF=0.054;AN=56;BaseQRankSum=2.637;DP=404;FS=0.000;HRun=14;HaplotypeScore=52.4240;InbreedingCoeff=0.4507;MQ=62.93;MQ0=3;MQRankSum=2.828;QD=4.98;ReadPosRankSum=1.462;VQSLOD=1.3591;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:25:36.37:0,36,458	0/0:2,0:3:5.58:0,6,30	0/0:12,0:8:5.99:0,6,51	0/0:8,0:5:0.47:0,0,1	0/0:12,0:16:32.61:0,33,260	0/0:14,2:17:12.31:0,12,245	0/0:8,1:9:17.94:0,18,151	0/0:30,0:28:45.03:0,45,412	0/0:12,0:12:26.70:0,27,233	0/0:11,0:13:14.88:0,15,89	0/0:13,0:12:11.94:0,12,63	0/0:15,0:15:21.47:0,21,186	0/0:10,1:11:0.40:0,0,138	0/0:17,0:17:27.01:0,27,244	0/0:17,0:18:29.98:0,30,268	0/0:12,0:14:29.72:0,30,235	0/0:7,0:10:13.56:0,14,69	1/1:3,15:19:32.68:226,33,0	0/0:21,1:23:17.54:0,18,265	0/0:16,0:17:26.86:0,27,233	0/0:8,0:8:12:0,12,106	0/0:9,0:9:12:0,12,106	0/0:11,0:11:14.93:0,15,122	0/1:6,2:8:8.59:9,0,66	0/0:14,0:13:39.01:0,39,354	0/0:20,0:20:33.41:0,33,288	0/0:14,0:14:23.90:0,24,195	0/0:10,0:9:9.01:0,9,84
chr10	86964570	.	GATTTATTC	G	833.38	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=5.003;DP=326;FS=14.038;HRun=0;HaplotypeScore=68.8818;InbreedingCoeff=0.8051;MQ=46.40;MQ0=23;MQRankSum=-4.031;QD=28.74;ReadPosRankSum=-0.437;VQSLOD=1.8863;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:48.16:0,48,1766	1/1:0,4:2:6.02:151,6,0	./.	./.	0/0:18,0:17:30.10:0,30,1161	0/0:16,0:16:42.14:0,42,1706	0/0:7,0:7:18.06:0,18,704	0/0:26,0:23:63.22:0,63,2391	0/0:13,0:12:27.26:0,27,1031	1/1:2,6:7:18.06:491,18,0	1/1:7,5:6:6.02:164,6,0	0/0:11,0:11:21.05:0,21,702	0/0:11,0:11:24.08:0,24,970	0/0:12,0:12:27.09:0,27,1037	0/0:9,0:9:15.05:0,15,586	0/0:15,0:14:33.11:0,33,1180	1/1:3,2:4:6.02:164,6,0	0/0:18,0:17:33.11:0,33,1280	0/0:19,0:17:33.10:0,33,1140	0/0:13,0:12:27.09:0,27,1069	0/0:7,0:5:12.04:0,12,511	0/0:5,0:4:6.02:0,6,187	0/0:6,0:5:6.02:0,6,199	0/0:6,0:6:12.04:0,12,464	0/0:13,0:11:21.04:0,21,621	0/0:16,0:15:33.11:0,33,1032	0/0:7,0:7:18.06:0,18,696	0/0:7,0:3:9.03:0,9,390
chr10	86965317	.	T	TCCAA	3531.84	PASS	AB=0.909;AC=9;AF=0.173;AN=52;BaseQRankSum=-9.794;DP=625;FS=8.676;HRun=0;HaplotypeScore=103.5475;InbreedingCoeff=0.8594;MQ=63.27;MQ0=1;MQRankSum=-2.834;QD=39.24;ReadPosRankSum=0.827;VQSLOD=3.5164;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:5,5:10:15.05:365,15,0	0/0:28,0:25:33.10:0,33,512	0/0:28,0:28:45.15:0,45,717	0/0:23,0:23:63.18:0,63,980	0/0:24,0:23:54.18:0,54,882	0/0:18,0:19:45.15:0,45,714	0/0:31,0:31:39.13:0,39,616	0/0:25,0:25:63.19:0,63,981	1/1:6,19:24:55.43:1317,55,0	1/1:3,8:12:24.08:575,24,0	0/0:35,0:35:87.30:0,87,1420	0/0:12,0:12:21.05:0,21,317	0/0:19,0:19:45.11:0,45,684	0/0:48,0:48:99:0,111,1812	0/0:30,0:30:60.20:0,60,971	1/1:6,16:23:48.16:1168,48,0	./.	0/0:16,0:16:36.12:0,36,579	0/0:20,0:20:54.18:0,54,882	0/0:44,0:44:99:0,108,1702	0/0:17,0:17:42.14:0,42,686	0/0:17,0:17:48.16:0,48,778	0/0:31,0:31:72.25:0,72,1176	0/0:23,0:23:54.18:0,54,878	0/1:18,2:20:99:107,0,498	0/0:33,0:33:81.28:0,81,1312	0/0:12,0:12:30.10:0,30,490
chr10	86966646	.	C	CGAGGA	4117.17	PASS	AB=0.923;AC=9;AF=0.161;AN=56;BaseQRankSum=-5.296;DP=600;FS=1.153;HRun=0;HaplotypeScore=114.5555;InbreedingCoeff=0.8658;MQ=79.17;MQ0=1;MQRankSum=-4.571;QD=42.45;ReadPosRankSum=1.521;VQSLOD=3.5782;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.33:0,96,1936	1/1:3,4:7:21.07:418,21,0	0/0:18,0:18:51.16:0,51,890	0/0:22,0:21:36.12:0,36,698	0/0:21,0:21:54.18:0,54,1091	0/0:18,0:18:45.14:0,45,877	0/0:19,0:19:51.14:0,51,996	0/0:32,0:32:78.26:0,78,1436	0/0:22,0:22:60.19:0,60,1147	1/1:7,6:13:27.09:705,27,0	1/1:3,17:22:42.14:1269,42,0	0/0:28,0:28:78.27:0,78,1563	0/0:21,0:21:51.14:0,51,948	0/0:16,0:16:42.13:0,42,800	0/0:34,0:34:90.29:0,90,1706	0/0:19,0:19:51.18:0,51,1035	1/1:10,19:31:54.06:1609,54,0	0/0:22,0:22:63.22:0,63,1202	0/0:23,0:23:57.20:0,57,1148	0/0:22,0:22:63.22:0,63,1250	0/0:29,0:29:75.26:0,75,1522	0/0:16,0:16:36.12:0,36,731	0/0:12,0:12:32.77:0,33,669	0/0:22,0:21:63.22:0,63,1279	0/0:17,0:17:45.15:0,45,901	0/1:22,2:24:99:116,0,1062	0/0:26,0:25:75.26:0,75,1522	0/0:9,0:9:27.09:0,27,493
chr10	86968550	.	T	TA	1849.74	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-7.584;DP=552;FS=2.285;HRun=9;HaplotypeScore=57.2069;InbreedingCoeff=0.9252;MQ=62.34;MQ0=7;MQRankSum=1.891;QD=20.55;ReadPosRankSum=0.354;VQSLOD=4.1114;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:98.94:0,99,856	1/1:1,6:7:15.04:166,15,0	0/0:5,0:5:2.07:0,2,44	0/0:7,0:7:20.85:0,21,164	0/0:22,0:22:53.97:0,54,465	0/0:15,0:15:41.99:0,42,364	0/0:17,0:16:44.83:0,45,373	0/0:24,0:22:50.93:0,51,435	0/0:12,0:12:35.99:0,36,312	1/1:9,12:21:13.05:372,13,0	1/1:4,23:28:68.98:731,69,0	0/0:23,0:23:62.89:0,63,530	0/0:20,0:20:56.99:0,57,494	0/0:15,0:15:41.99:0,42,364	0/0:21,0:21:47.97:0,48,413	0/0:30,0:30:86.87:0,87,739	1/1:6,28:33:31.57:736,32,0	0/0:24,0:24:59.98:0,60,520	0/0:34,0:33:86.95:0,87,753	0/0:21,0:21:53.97:0,54,469	0/0:4,0:4:12:0,12,104	0/0:11,0:11:32.99:0,33,284	0/0:11,0:11:29.99:0,30,260	0/0:11,0:10:29.99:0,30,260	0/0:21,0:20:53.88:0,54,469	0/0:27,0:27:74.96:0,75,648	0/0:35,0:35:92.96:0,93,807	0/0:11,0:11:32.99:0,33,286
chr10	86968991	.	C	CA	2355.44	PASS	AB=0.931;AC=13;AF=0.232;AN=56;BaseQRankSum=1.702;DP=582;FS=0.439;HRun=10;HaplotypeScore=64.2668;InbreedingCoeff=0.8688;MQ=53.58;MQ0=13;MQRankSum=2.648;QD=14.81;ReadPosRankSum=0.338;VQSLOD=3.7676;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,23:27:38.52:615,39,0	1/1:3,3:6:9.02:95,9,0	0/0:6,0:5:12.57:0,13,81	0/0:9,0:8:20.12:0,20,142	0/0:25,0:25:53.87:0,54,439	0/0:17,0:17:36.77:0,37,298	0/0:14,0:13:35.95:0,36,295	0/0:36,1:34:36.84:0,37,505	0/0:22,0:22:50.91:0,51,415	1/1:12,10:21:8.49:295,8,0	1/1:10,10:20:8.44:293,8,0	0/0:30,0:30:71.88:0,72,589	0/0:21,0:22:40.89:0,41,326	0/0:12,0:11:26.94:0,27,219	0/0:21,0:20:56.90:0,57,465	0/0:22,0:21:56.92:0,57,466	1/1:5,19:24:51.10:533,51,0	1/1:8,21:28:69.03:697,69,0	0/0:22,0:23:50.69:0,51,391	0/0:20,0:20:47.94:0,48,394	0/0:22,0:21:50.92:0,51,419	0/0:19,0:19:44.92:0,45,369	0/0:15,0:14:35.95:0,36,296	0/0:27,0:26:56.55:0,57,463	0/0:14,0:14:35:0,35,277	0/1:25,2:26:7.08:7,0,362	0/0:35,0:35:68.81:0,69,561	0/0:8,0:6:17.98:0,18,148
chr10	86970034	.	C	CT	3006.34	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-10.329;DP=626;FS=6.270;HRun=6;HaplotypeScore=60.3796;InbreedingCoeff=0.9952;MQ=76.80;MQ0=0;MQRankSum=-0.614;QD=31.65;ReadPosRankSum=0.417;VQSLOD=4.1040;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.22:0,96,979	1/1:0,9:9:27.09:340,27,0	0/0:12,0:15:30.05:0,30,301	0/0:12,0:12:15.46:0,15,143	0/0:42,0:42:99:0,120,1210	0/0:30,0:30:84.15:0,84,842	0/0:16,0:16:48.11:0,48,489	0/0:36,0:36:96.21:0,96,979	0/0:18,0:18:51.11:0,51,520	1/1:2,20:22:60.19:754,60,0	1/1:4,27:31:78.25:979,78,0	0/0:23,0:23:57.11:0,57,575	0/0:13,0:13:36.08:0,36,367	0/0:23,1:24:28.43:0,28,596	0/0:21,0:21:57.11:0,57,574	0/0:20,0:20:57.13:0,57,582	1/1:0,33:33:87.28:1094,87,0	0/0:26,0:26:78.14:0,78,785	0/0:27,0:27:72.14:0,72,723	0/0:25,0:25:72.13:0,72,721	0/0:26,0:26:69.07:0,69,674	0/0:12,0:12:36.08:0,36,367	0/0:17,0:17:48.11:0,48,489	0/0:24,0:24:63.14:0,63,642	0/0:15,0:14:39.08:0,39,398	0/0:27,0:27:78.17:0,78,796	0/0:13,0:13:39.09:0,39,398	0/0:15,0:15:42.10:0,42,429
chr10	86970972	.	C	CAA	2672.55	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-7.943;DP=543;FS=9.396;HRun=9;HaplotypeScore=66.5418;InbreedingCoeff=0.9850;MQ=75.46;MQ0=0;MQRankSum=-1.931;QD=31.08;ReadPosRankSum=0.824;VQSLOD=3.1443;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:41:99:0,108,1101	1/1:0,3:3:9.03:135,9,0	0/0:17,0:18:32.01:0,32,265	0/0:16,0:17:26.87:0,27,259	0/0:17,0:17:48.12:0,48,510	0/0:20,0:20:28.19:0,28,488	0/0:20,0:21:62.88:0,63,642	0/0:30,0:30:63.12:0,63,664	0/0:17,0:17:42.10:0,42,447	1/1:5,12:17:37.37:552,37,0	1/1:4,17:22:51.09:732,51,0	0/0:23,0:23:69.17:0,69,734	0/0:12,0:12:30.03:0,30,301	0/0:15,0:15:45.10:0,45,471	0/0:29,0:29:75.10:0,75,782	0/0:28,0:28:78.17:0,78,822	1/1:2,30:32:87.30:1339,87,0	1/1:1,0:12:24.95:86,25,0	0/0:13,0:13:36.09:0,36,383	0/0:18,0:18:42.03:0,42,439	0/0:15,0:15:33.07:0,33,351	0/0:19,0:19:57.14:0,57,606	0/0:18,0:19:42.01:0,42,490	0/0:12,0:12:33.08:0,33,350	0/0:19,0:19:54.13:0,54,575	0/0:24,0:24:66.16:0,66,702	0/0:20,0:20:57.12:0,57,597	0/0:10,0:10:30.08:0,30,319
chr10	86971138	.	GC	G	455.73	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.530;DP=332;FS=0.900;HRun=8;HaplotypeScore=40.8214;InbreedingCoeff=0.6822;MQ=70.54;MQ0=0;MQRankSum=-0.133;QD=15.71;ReadPosRankSum=1.316;VQSLOD=3.0671;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:29:57.08:550,57,0	0/0:2,0:7:8.12:0,8,37	0/0:11,0:9:17.91:0,18,186	0/0:9,1:8:11.77:0,12,128	0/0:14,0:14:30.06:0,30,328	0/0:18,0:18:36.10:0,36,422	0/0:12,0:12:36.11:0,36,432	0/0:15,0:15:33.10:0,33,396	0/0:21,0:21:48.12:0,48,556	0/0:0,0:6:11.50:0,12,58	0/0:2,0:4:5.87:0,6,40	0/0:14,0:14:36.11:0,36,434	0/0:9,0:9:24.04:0,24,265	0/0:10,0:10:24.07:0,24,289	0/0:18,0:18:45.13:0,45,533	0/0:15,0:15:36.11:0,36,433	0/0:2,0:11:25.88:0,26,131	0/0:2,0:6:5.75:0,6,29	0/0:8,0:8:9.03:0,9,109	0/0:11,0:11:21.06:0,21,253	0/0:15,0:15:39.09:0,39,449	0/0:7,0:7:21.06:0,21,252	0/0:8,0:8:21.05:0,21,242	0/0:17,0:17:39.04:0,39,436	0/0:9,0:9:21.06:0,21,253	0/0:10,0:10:24.07:0,24,290	0/0:8,0:8:24.07:0,24,290	0/0:9,0:9:21.02:0,21,237
chr10	86971487	.	AAACC	A	3594.81	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.066;DP=612;FS=5.902;HRun=0;HaplotypeScore=100.0752;InbreedingCoeff=0.9606;MQ=66.64;MQ0=1;MQRankSum=-0.133;QD=30.21;ReadPosRankSum=3.750;VQSLOD=3.1870;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,22:32:54.14:902,54,0	1/1:0,6:6:15.05:251,15,0	0/0:42,0:32:53.96:0,54,1102	0/0:28,0:27:45.15:0,45,978	0/0:20,0:20:48.16:0,48,1126	0/0:20,0:20:42.13:0,42,987	0/0:25,0:25:60.15:0,60,1264	0/0:38,0:38:81.27:0,81,1823	0/0:24,0:24:51.17:0,51,1243	1/1:5,18:23:54.18:884,54,0	1/1:1,5:6:14.96:190,15,0	0/0:22,0:22:54.18:0,54,1297	0/0:23,0:23:60.21:0,60,1452	0/0:16,0:16:33.11:0,33,791	0/0:22,0:22:48.16:0,48,1163	0/0:20,0:20:45.15:0,45,1089	1/1:6,20:26:16.93:768,17,0	1/1:8,18:26:35.20:599,35,0	0/0:23,0:23:54.17:0,54,1213	0/0:13,0:13:33.11:0,33,773	0/0:34,0:34:90.31:0,90,2146	0/0:14,0:14:42.13:0,42,925	0/0:9,0:9:21.07:0,21,476	0/0:27,0:28:66.23:0,66,1590	0/0:16,0:16:45.15:0,45,1085	0/0:18,1:19:4.01:0,4,1170	0/0:28,0:28:72.25:0,72,1751	0/0:9,0:9:27.09:0,27,622
chr10	86974287	.	CTTTT	C	582.96	PASS	AB=0.598;AC=4;AF=0.071;AN=56;BaseQRankSum=2.071;DP=440;FS=0.000;HRun=16;HaplotypeScore=82.2020;InbreedingCoeff=0.3764;MQ=66.41;MQ0=0;MQRankSum=-3.763;QD=20.10;ReadPosRankSum=4.573;VQSLOD=2.0739;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:38.10:0,38,469	0/1:1,3:4:32.06:102,0,32	0/0:18,0:8:15.05:0,15,226	0/0:21,0:11:3.95:0,4,46	0/0:12,0:14:21.53:0,22,380	0/0:17,0:17:30.10:0,30,610	0/0:17,0:20:51.07:0,51,914	0/0:29,0:27:55.78:0,56,841	0/0:16,0:16:33.10:0,33,583	1/1:2,7:9:25.32:311,25,0	0/1:6,9:14:44.89:285,0,45	0/0:12,0:12:27.09:0,27,565	0/0:12,0:14:30.09:0,30,600	0/0:13,0:13:27.08:0,27,446	0/0:18,0:18:45.15:0,45,977	0/0:15,0:15:36.08:0,36,704	0/0:14,0:14:2.13:0,2,6	0/0:10,0:10:16.87:0,17,274	0/0:20,0:20:47.60:0,48,618	0/0:18,0:18:41.99:0,42,578	0/0:10,0:10:12.69:0,13,136	0/0:6,0:6:15.05:0,15,279	0/0:9,0:11:18.94:0,19,367	0/0:17,0:17:38.84:0,39,762	0/0:22,0:25:60.16:0,60,1133	0/0:19,0:18:41.67:0,42,564	0/0:20,0:20:46.82:0,47,579	0/0:10,0:10:6.02:0,6,100
chr10	86974298	.	T	TTGGTTC	861.32	PASS	AB=0.957;AC=7;AF=0.125;AN=56;BaseQRankSum=3.291;DP=474;FS=0.740;HRun=0;HaplotypeScore=118.6080;InbreedingCoeff=0.6586;MQ=55.10;MQ0=5;MQRankSum=-6.335;QD=15.95;ReadPosRankSum=3.530;VQSLOD=2.7169;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:16:1.34:0,1,274	1/1:5,0:5:12:155,12,0	0/0:25,0:7:15.05:0,15,223	0/0:24,0:5:2.74:0,3,44	0/0:14,0:14:27.08:0,27,477	0/0:17,0:17:36.12:0,36,777	0/0:19,0:19:54.08:0,54,975	0/0:30,0:28:69.75:0,70,968	0/0:15,0:15:36.11:0,36,643	1/1:15,0:13:28.21:365,28,0	0/1:21,0:21:9.01:329,0,9	0/0:14,0:14:36.12:0,36,750	0/0:15,0:15:39.09:0,39,657	0/0:14,0:14:33.10:0,33,564	0/0:24,0:24:57.17:0,57,1161	0/0:18,0:18:42.09:0,42,786	1/1:7,4:11:1.84:145,2,0	0/0:11,0:9:16.71:0,17,208	0/0:19,0:18:49.56:0,50,571	0/0:19,0:19:47.98:0,48,642	0/0:9,0:9:16.04:0,16,163	0/0:10,0:9:21.54:0,22,360	0/0:8,0:8:17.47:0,17,335	0/0:20,0:20:57.18:0,57,1092	0/0:21,0:21:60.16:0,60,1124	0/0:17,0:16:41.42:0,41,535	0/0:22,0:22:53.61:0,54,617	0/0:17,0:15:21.05:0,21,341
chr10	86974966	.	G	GTT	925.90	PASS	AB=0.964;AC=13;AF=0.232;AN=56;BaseQRankSum=-2.883;DP=328;FS=1.559;HRun=13;HaplotypeScore=73.7944;InbreedingCoeff=0.6947;MQ=65.63;MQ0=6;MQRankSum=2.449;QD=10.29;ReadPosRankSum=-3.182;VQSLOD=1.5532;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,8:14:15.05:204,15,0	1/1:2,1:3:3.01:41,3,0	0/1:26,0:10:32.71:33,0,75	0/0:14,0:9:0.74:0,1,22	0/0:17,0:22:27.92:0,28,328	0/0:16,0:17:30.84:0,31,232	0/0:7,0:8:17.71:0,18,144	0/0:23,0:25:33.88:0,34,281	0/0:5,0:6:8.73:0,9,110	1/1:4,12:16:36.93:402,37,0	1/1:8,5:14:17.93:183,18,0	0/0:11,0:12:23.70:0,24,196	0/0:12,0:12:23.86:0,24,203	0/0:7,0:6:10.20:0,10,83	0/0:11,0:11:22.82:0,23,170	0/0:11,0:10:23.77:0,24,191	1/1:7,3:11:14.47:149,14,0	1/1:2,2:5:8.97:88,9,0	0/0:12,0:14:23.33:0,23,160	0/0:8,0:8:15.64:0,16,135	0/0:3,0:3:2.97:0,3,26	0/0:4,0:4:5.93:0,6,51	0/0:15,0:15:23.90:0,24,210	0/0:3,0:4:2.85:0,3,71	0/0:8,0:9:17.40:0,17,143	0/0:12,0:13:13.09:0,13,127	0/0:12,0:12:19.59:0,20,130	0/0:10,0:10:16.99:0,17,156
chr10	86976946	.	GATA	G	3693.23	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.767;DP=633;FS=2.088;HRun=0;HaplotypeScore=86.9951;InbreedingCoeff=0.9977;MQ=77.04;MQ0=0;MQRankSum=-0.715;QD=45.60;ReadPosRankSum=2.112;VQSLOD=5.5964;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.17:0,51,1081	1/1:0,9:9:24.08:408,24,0	0/0:17,0:17:45.13:0,45,914	0/0:10,0:10:21.05:0,21,392	0/0:30,0:30:90.31:0,90,2037	0/0:25,0:25:72.25:0,72,1637	0/0:19,0:19:54.16:0,54,1141	0/0:40,0:40:99:0,108,2362	0/0:21,0:21:60.20:0,60,1323	1/1:2,23:25:69.22:1142,69,0	1/1:1,21:22:66.23:1121,66,0	0/0:24,0:24:72.25:0,72,1640	0/0:22,0:22:66.23:0,66,1439	0/0:24,0:24:72.17:0,72,1560	0/0:31,0:31:93.32:0,93,2124	0/0:27,0:26:78.25:0,78,1720	1/1:0,25:25:59.84:1022,60,0	0/0:8,0:8:24.05:0,24,505	0/0:22,0:22:57.19:0,57,1271	0/0:32,0:32:93.31:0,93,2058	0/0:21,0:20:57.20:0,57,1314	0/0:21,0:21:63.22:0,63,1435	0/0:23,0:23:66.23:0,66,1521	0/0:21,0:21:63.22:0,63,1451	0/0:21,0:21:63.22:0,63,1453	0/0:27,0:27:81.28:0,81,1834	0/0:30,0:30:90.30:0,90,1969	0/0:19,0:19:57.16:0,57,1215
chr10	86979677	.	T	TG	1898.90	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.791;DP=612;FS=1.344;HRun=1;HaplotypeScore=96.9509;InbreedingCoeff=0.9772;MQ=67.04;MQ0=10;MQRankSum=-1.157;QD=13.96;ReadPosRankSum=3.159;VQSLOD=3.1706;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,1:33:38.29:371,38,0	1/1:13,0:13:32.12:212,32,0	0/0:46,1:16:24.66:0,25,203	0/0:42,0:17:12.58:0,13,237	0/0:30,0:30:70.19:0,70,716	0/0:12,0:12:25.75:0,26,208	0/0:18,0:18:42.54:0,43,438	0/0:44,0:45:67.73:0,68,776	0/0:14,0:14:36.13:0,36,300	1/1:26,0:26:61.34:409,61,0	1/1:24,0:24:63.24:411,63,0	0/0:15,0:16:30.51:0,31,315	0/0:14,0:14:26.27:0,26,297	0/0:5,0:5:9.02:0,9,102	0/0:15,0:16:36.01:0,36,348	0/0:14,0:15:30.85:0,31,315	1/1:26,0:26:70.04:477,70,0	1/1:3,11:14:15.05:207,15,0	0/0:26,0:26:63.65:0,64,640	0/0:23,0:23:55.38:0,55,593	0/0:13,0:13:27.03:0,27,273	0/0:18,0:18:31.01:0,31,323	0/0:16,0:16:45.10:0,45,501	0/0:21,0:21:51.10:0,51,571	0/0:21,0:21:46.36:0,46,512	0/0:24,0:24:38.54:0,39,392	0/0:28,0:28:69.15:0,69,628	0/0:11,0:10:20.83:0,21,233
chr10	86979678	.	GT	G	633.84	PASS	AB=0.944;AC=12;AF=0.214;AN=56;BaseQRankSum=3.161;DP=642;FS=5.867;HRun=16;HaplotypeScore=96.9051;InbreedingCoeff=0.4366;MQ=65.35;MQ0=12;MQRankSum=2.966;QD=3.28;ReadPosRankSum=4.304;VQSLOD=0.4615;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:37:38.35:0,38,193	1/1:1,11:12:28.83:169,29,0	0/0:47,0:15:22.39:0,22,125	0/1:42,0:17:11.14:11,0,63	0/0:29,2:32:33.81:0,34,416	0/0:11,1:12:2.61:0,3,109	0/0:17,1:19:11.84:0,12,194	0/0:41,2:43:8.70:0,9,343	0/0:17,0:17:12.45:0,12,131	1/1:10,14:25:16.95:286,17,0	1/1:17,7:25:0.90:124,1,0	0/0:17,0:17:29.80:0,30,231	0/0:14,1:16:20.61:0,21,250	0/0:6,0:6:12.29:0,12,88	0/0:17,0:17:21.74:0,22,157	0/0:14,1:16:2.57:0,3,196	1/1:17,8:25:10.74:161,11,0	0/0:16,0:16:20.14:0,20,111	0/0:26,0:27:19.34:0,19,275	0/0:25,1:26:22.78:0,23,343	0/1:11,1:13:3.25:3,0,135	0/0:17,0:18:25.21:0,25,181	0/1:15,2:17:27.74:28,0,171	0/0:22,0:22:48.16:0,48,376	0/0:17,1:19:22.36:0,22,258	0/0:23,0:25:1.65:0,2,156	0/1:28,1:30:5.85:6,0,234	0/0:13,0:13:26.64:0,27,202
chr10	86983871	.	T	TTTG	5325.49	PASS	AB=0.793;AC=15;AF=0.268;AN=56;BaseQRankSum=-13.109;DP=635;FS=2.655;HRun=0;HaplotypeScore=90.0567;InbreedingCoeff=0.7287;MQ=72.28;MQ0=1;MQRankSum=-1.647;QD=24.10;ReadPosRankSum=1.336;VQSLOD=4.9839;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:34:59.44:0,59,414	0/0:9,0:9:24.06:0,24,313	0/0:35,0:33:33.07:0,33,423	0/1:21,0:21:14.81:15,0,247	0/0:24,0:24:27.06:0,27,336	0/0:29,0:32:57.09:0,57,724	0/0:22,0:24:39.08:0,39,500	0/1:23,7:31:13.36:414,0,13	0/0:22,0:22:42.14:0,42,578	0/0:24,0:24:36.12:0,36,496	0/0:14,0:14:30.09:0,30,399	0/0:16,0:17:39.08:0,39,499	0/0:8,0:8:15.03:0,15,188	0/0:22,0:22:45.14:0,45,603	0/0:26,0:26:57.17:0,57,767	0/0:22,0:23:57.16:0,57,764	0/0:27,0:26:57.14:0,57,734	1/1:10,16:27:42.03:874,42,0	1/1:18,9:27:30.08:556,30,0	1/1:12,11:24:30.10:586,30,0	0/1:7,17:24:31.46:839,0,31	0/0:13,0:13:30.10:0,30,413	0/0:16,0:16:24.08:0,24,331	0/0:25,0:25:54.13:0,54,707	0/0:18,0:18:36.12:0,36,494	1/1:12,14:26:39.12:736,39,0	1/1:11,19:31:48.16:949,48,0	1/1:4,6:10:18.06:356,18,0
chr10	86984027	.	T	TTGTG	1875.25	PASS	AB=0.704;AC=25;AF=0.500;AN=50;BaseQRankSum=-0.853;DP=527;FS=18.576;HRun=0;HaplotypeScore=108.7420;InbreedingCoeff=0.6884;MQ=62.70;MQ0=11;MQRankSum=-1.499;QD=7.33;ReadPosRankSum=0.562;VQSLOD=1.1570;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:32:4.66:0,5,53	1/1:6,0:6:8.99:100,9,0	./.	./.	0/0:14,0:16:6.01:0,6,62	0/0:29,0:29:17.98:0,18,203	0/0:17,0:17:14.73:0,15,199	1/1:36,0:35:6.02:70,6,0	0/0:13,0:13:12.02:0,12,137	1/1:19,2:21:9.50:193,10,0	1/1:21,0:21:5.90:40,6,0	0/0:11,0:11:9.58:0,10,123	0/0:17,0:16:11.95:0,12,137	0/0:16,0:16:18.02:0,18,212	1/1:22,3:28:1.86:68,2,0	1/1:6,5:11:5.91:86,6,0	1/1:17,0:18:3.51:296,4,0	0/0:18,0:26:7.03:0,7,59	1/1:17,0:16:9.50:146,10,0	1/1:10,0:16:9.03:138,9,0	1/1:19,0:18:14.94:212,15,0	0/0:8,0:7:12.36:0,12,133	0/0:15,0:14:14.94:0,15,202	0/1:11,6:18:41.34:216,0,41	0/0:15,0:14:8.94:0,9,108	1/1:23,0:22:23.99:314,24,0	1/1:20,0:20:17.14:184,17,0	./.
chr10	86986691	.	G	GT	3695.74	PASS	AB=0.676;AC=25;AF=0.446;AN=56;BaseQRankSum=-5.829;DP=616;FS=6.370;HRun=13;HaplotypeScore=71.5389;InbreedingCoeff=0.8424;MQ=67.60;MQ0=5;MQRankSum=-0.499;QD=12.00;ReadPosRankSum=0.463;VQSLOD=3.4815;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:29:51.23:259,51,0	1/1:1,5:6:12.01:111,12,0	0/0:54,0:20:6.78:0,7,32	0/0:46,0:11:2.93:0,3,70	0/0:28,1:29:31.57:0,32,361	0/0:12,0:12:20.76:0,21,144	0/0:15,0:15:7.85:0,8,196	1/1:13,19:33:35.86:420,36,0	0/0:11,0:11:32.67:0,33,223	0/1:13,12:25:19.28:252,0,19	1/1:3,15:19:35.84:310,36,0	0/0:7,0:7:17.79:0,18,120	0/0:11,0:11:23.77:0,24,164	0/0:12,0:15:33.78:0,34,215	0/0:14,0:16:30.76:0,31,194	0/0:12,0:12:32.70:0,33,224	1/1:5,19:26:24.14:342,24,0	1/1:8,18:27:23.66:232,24,0	1/1:10,16:26:24.37:340,24,0	1/1:9,15:25:5.07:292,5,0	1/1:2,9:10:18.02:167,18,0	0/0:14,0:14:26.70:0,27,184	0/0:22,0:23:61.38:0,61,410	0/0:18,0:20:48.28:0,48,307	0/0:16,1:20:42.71:0,43,279	1/1:7,16:26:13.15:426,13,0	1/1:6,24:32:7.91:223,8,0	1/1:5,17:21:35.91:320,36,0
chr10	86988369	.	AC	A	1913.07	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.602;DP=414;FS=0.000;HRun=1;HaplotypeScore=44.9948;InbreedingCoeff=0.9311;MQ=54.58;MQ0=5;MQRankSum=2.331;QD=33.56;ReadPosRankSum=1.117;VQSLOD=3.1465;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:45.15:0,45,716	1/1:0,6:6:15.05:206,15,0	0/0:7,0:4:5.91:0,6,64	0/0:11,0:5:11.89:0,12,96	0/0:19,0:19:57.19:0,57,909	0/0:12,0:12:36.08:0,36,543	0/0:21,0:21:42.14:0,42,667	0/0:27,0:27:81.26:0,81,1245	0/0:13,0:13:39.05:0,39,590	1/1:0,15:13:39.12:529,39,0	1/1:0,14:14:33.11:459,33,0	0/0:8,0:8:21.07:0,21,333	0/0:13,0:13:36.11:0,36,545	0/0:7,0:7:18.05:0,18,264	0/0:22,0:22:57.18:0,57,885	0/0:16,0:16:39.13:0,39,620	1/1:1,21:22:63.21:878,63,0	0/0:22,0:22:60.20:0,60,951	0/0:10,0:9:21.03:0,21,304	0/0:13,0:13:30.10:0,30,478	0/0:23,0:22:60.19:0,60,918	0/0:4,0:4:9.03:0,9,142	0/0:6,0:6:15.05:0,15,239	0/0:20,0:19:39.13:0,39,621	0/0:8,0:8:18.06:0,18,287	0/0:29,0:29:84.24:0,84,1303	0/0:18,0:18:48.08:0,48,698	0/0:8,0:8:21.07:0,21,333
chr10	86989056	.	CT	C	484.72	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.307;DP=472;FS=2.814;HRun=8;HaplotypeScore=44.8426;InbreedingCoeff=0.8021;MQ=77.58;MQ0=0;MQRankSum=-2.016;QD=23.08;ReadPosRankSum=1.047;VQSLOD=4.1534;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:60.10:579,60,0	0/0:9,0:9:27.08:0,27,326	0/0:12,0:12:21.75:0,22,286	0/0:7,1:8:9.21:0,9,140	0/0:25,0:25:72.22:0,72,870	0/0:30,0:30:78.23:0,78,931	0/0:14,0:14:39.12:0,39,471	0/0:18,0:18:36.11:0,36,435	0/0:21,0:21:57.16:0,57,677	0/0:10,0:10:30.09:0,30,362	0/0:25,1:26:46.24:0,46,829	0/0:15,0:15:45.14:0,45,543	0/0:18,0:18:48.12:0,48,558	0/0:15,0:15:45.14:0,45,544	0/0:23,0:23:57.17:0,57,680	0/0:17,0:17:51.15:0,51,606	0/0:40,0:40:99:0,105,1245	0/0:9,0:9:24.01:0,24,261	0/0:18,0:18:54.17:0,54,650	0/0:21,0:21:63.18:0,63,751	0/0:9,0:9:24.07:0,24,286	0/0:1,0:1:3.01:0,3,36	0/0:14,0:14:42.10:0,42,491	0/0:14,0:14:39.12:0,39,471	0/0:13,0:13:33.10:0,33,399	0/0:19,0:19:57.17:0,57,678	0/0:25,0:25:63.17:0,63,739	0/0:7,0:7:21.06:0,21,254
chr10	86990264	.	CT	C	917.10	PASS	AB=0.727;AC=21;AF=0.375;AN=56;BaseQRankSum=4.502;DP=304;FS=14.425;HRun=15;HaplotypeScore=35.8367;InbreedingCoeff=0.3671;MQ=70.07;MQ0=10;MQRankSum=-1.565;QD=4.70;ReadPosRankSum=2.925;VQSLOD=0.3390;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:21:26.44:76,26,0	1/1:3,1:5:7.01:30,7,0	0/0:18,0:11:3.15:0,3,36	0/0:23,1:9:0.88:0,1,2	0/0:22,1:24:29.58:0,30,271	0/0:7,0:8:8.14:0,8,96	0/0:2,0:2:6:0,6,53	1/1:9,11:19:22.42:135,22,0	0/0:3,0:3:5.99:0,6,49	1/1:4,5:10:14.70:96,15,0	0/1:8,3:11:4.40:60,0,4	0/0:3,0:4:11.97:0,12,97	0/0:4,0:3:8.99:0,9,77	0/0:3,0:3:8.99:0,9,74	0/1:7,2:9:7.22:7,0,60	0/0:6,0:6:11.86:0,12,85	1/1:11,16:27:28.78:305,29,0	1/1:3,0:11:12.15:35,12,0	0/1:6,4:9:11.30:45,0,11	1/1:4,7:11:17.61:115,18,0	0/0:1,1:2:0:0,0,0	0/0:3,0:3:0.89:0,1,2	0/0:2,0:2:6:0,6,53	0/0:4,0:3:6:0,6,53	0/1:9,1:9:1.26:1,0,110	0/1:5,6:13:7.57:69,0,8	0/1:4,6:10:17.52:30,0,18	0/1:8,12:21:14.06:87,0,14
chr10	86990537	.	GTCTGTCTTTCTTTCTT	G	2668.15	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=0.044;DP=426;FS=2.489;HRun=0;HaplotypeScore=186.7559;InbreedingCoeff=0.6009;MQ=68.14;MQ0=3;MQRankSum=-2.375;QD=14.12;ReadPosRankSum=0.416;VQSLOD=2.8193;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:12.04:333,12,0	0/1:7,0:7:37.33:37,0,354	0/0:16,0:14:28.84:0,29,274	0/0:7,0:6:14.98:0,15,136	0/0:21,0:21:50.97:0,51,1322	0/0:25,0:25:71.97:0,72,2056	0/0:27,0:27:80.84:0,81,1684	1/1:27,0:26:74.96:670,75,0	0/0:19,0:19:57:0,57,1841	0/1:17,0:17:99:272,0,313	0/1:19,0:19:99:113,0,605	0/0:17,0:17:21:0,21,241	0/0:15,0:15:27.03:0,27,417	0/0:9,0:9:17.91:0,18,171	0/0:20,0:20:57.04:0,57,1797	0/0:17,0:17:47.91:0,48,900	0/1:18,0:18:99:111,0,395	0/1:10,0:10:26.28:170,0,26	1/1:8,0:7:20.99:185,21,0	1/1:7,0:7:20.82:149,21,0	1/1:11,0:11:11.94:94,12,0	0/0:5,0:5:14.96:0,15,484	0/0:10,0:10:23.78:0,24,303	0/0:19,0:19:53.98:0,54,1403	0/0:10,0:10:27.04:0,27,999	1/1:5,0:10:26.92:225,27,0	1/1:13,0:13:38.84:310,39,0	1/1:10,0:10:23.99:208,24,0
chr10	86990541	.	GTCTTTCTT	G	745.17	PASS	AB=1.000;AC=11;AF=0.306;AN=36;BaseQRankSum=1.089;DP=422;FS=6.545;HRun=0;HaplotypeScore=136.2555;InbreedingCoeff=0.4953;MQ=65.71;MQ0=3;MQRankSum=-2.963;QD=6.37;ReadPosRankSum=1.970;VQSLOD=2.1009;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:0.42:41,0,0	0/0:9,0:9:5.87:0,6,202	./.	./.	0/0:11,0:20:23.81:0,24,181	0/0:25,0:25:24.08:0,24,808	0/0:28,0:28:21.07:0,21,742	./.	0/0:19,0:19:30.10:0,30,879	0/0:20,0:20:9.97:0,10,143	0/1:20,0:20:51.69:52,0,143	1/1:5,9:14:6.02:147,6,0	1/1:7,6:13:9.03:220,9,0	1/1:5,4:9:3.01:73,3,0	0/0:19,0:19:21.07:0,21,739	0/0:16,0:16:9.03:0,9,294	0/1:19,0:19:57.51:58,0,98	./.	./.	./.	./.	0/0:5,0:5:6.02:0,6,240	1/1:5,5:10:12.04:288,12,0	0/0:18,0:19:15.05:0,15,485	0/0:10,0:10:12.04:0,12,430	./.	./.	./.
chr10	86990563	.	CT	C	683.77	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=4.769;DP=376;FS=10.087;HRun=3;HaplotypeScore=87.6169;InbreedingCoeff=0.8656;MQ=51.88;MQ0=9;MQRankSum=-3.549;QD=14.55;ReadPosRankSum=-1.329;VQSLOD=1.8997;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:29.79:0,30,355	0/0:9,0:9:27.09:0,27,372	0/0:4,0:4:5.93:0,6,40	./.	0/0:25,0:25:54.02:0,54,548	0/0:22,0:22:63.20:0,63,872	0/0:25,0:25:63.21:0,63,885	1/1:5,7:10:21.03:233,21,0	0/0:19,0:19:57.18:0,57,789	0/0:24,0:24:67.06:0,67,884	0/0:21,0:21:63:0,63,734	0/0:11,0:11:6.96:0,7,85	0/0:14,0:14:22.48:0,22,281	0/0:9,0:9:15.52:0,16,208	0/0:18,0:18:54.18:0,54,760	0/0:9,0:9:24.06:0,24,309	0/0:21,0:19:38.81:0,39,510	0/0:8,0:7:21.07:0,21,290	1/1:3,2:3:5.63:71,6,0	1/1:0,6:6:15.04:179,15,0	1/1:0,0:6:3.01:36,3,0	0/0:7,0:6:15.03:0,15,179	0/0:15,0:15:30.47:0,30,333	0/0:20,0:20:54.62:0,55,696	0/0:10,0:10:26.44:0,26,332	1/1:5,0:5:12.04:143,12,0	1/1:4,4:8:11.62:143,12,0	1/1:5,0:4:5.98:55,6,0
chr10	86990587	.	CT	C	535.83	PASS	AB=0.818;AC=5;AF=0.093;AN=54;BaseQRankSum=8.379;DP=370;FS=12.100;HRun=3;HaplotypeScore=84.5400;InbreedingCoeff=-0.1113;MQ=49.18;MQ0=9;MQRankSum=-7.971;QD=5.01;ReadPosRankSum=1.449;VQSLOD=-0.5018;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:42.23:42,0,416	0/1:5,3:10:65.72:94,0,66	0/0:5,0:2:6.01:0,6,65	./.	0/0:24,0:24:51.07:0,51,565	0/0:20,0:20:60.20:0,60,836	0/0:15,0:15:45.15:0,45,630	0/0:14,0:12:36.12:0,36,482	0/0:15,0:15:45.14:0,45,617	0/1:12,7:20:99:189,0,160	0/1:13,7:21:99:146,0,158	0/0:17,0:17:18.96:0,19,224	0/0:11,0:11:16.46:0,16,207	0/0:9,0:9:15.52:0,16,204	0/0:17,0:17:48.15:0,48,657	0/0:5,0:5:15.05:0,15,211	0/1:17,5:22:99:181,0,250	0/0:12,0:11:27.98:0,28,369	0/0:9,0:8:24.08:0,24,326	0/0:6,0:6:18.06:0,18,244	0/0:8,0:8:21.07:0,21,279	0/0:7,0:6:18.06:0,18,248	0/0:15,0:15:30.49:0,30,352	0/0:14,0:13:39.05:0,39,450	0/0:9,0:9:21.52:0,22,279	0/0:13,0:13:27.08:0,27,355	0/0:9,0:9:27.08:0,27,350	0/0:5,0:4:12.01:0,12,143
chr10	86990591	.	C	CTTA	2414.14	PASS	AB=0.923;AC=7;AF=0.125;AN=56;BaseQRankSum=11.037;DP=373;FS=5.129;HRun=0;HaplotypeScore=92.3978;InbreedingCoeff=0.7326;MQ=49.25;MQ0=7;MQRankSum=-7.356;QD=31.76;ReadPosRankSum=3.546;VQSLOD=4.0078;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:11.28:0,11,509	1/1:5,5:10:30.03:502,30,0	0/0:6,0:2:6.02:0,6,99	0/0:6,0:4:3:0,3,28	0/0:24,0:24:60.04:0,60,857	0/0:22,0:22:60.17:0,60,965	0/0:15,0:15:45.15:0,45,760	0/0:13,0:12:36.12:0,36,590	0/0:16,0:16:44.05:0,44,671	1/1:14,5:19:40.03:773,40,0	1/1:12,9:23:60.13:974,60,0	0/0:16,0:16:27.02:0,27,367	0/0:10,0:10:21.04:0,21,261	0/0:9,0:9:18.05:0,18,282	0/0:17,0:17:48.15:0,48,774	0/0:5,0:5:15.05:0,15,255	0/1:21,2:22:99:313,0,246	0/0:11,0:11:24.97:0,25,403	0/0:11,0:10:30.08:0,30,430	0/0:6,0:6:18.06:0,18,303	0/0:8,0:8:21.07:0,21,350	0/0:7,0:6:18.06:0,18,306	0/0:15,0:15:39.11:0,39,571	0/0:14,0:13:18.54:0,19,311	0/0:9,0:9:18.06:0,18,301	0/0:13,0:13:27.09:0,27,457	0/0:10,0:10:30.08:0,30,474	0/0:4,0:4:12.01:0,12,173
chr10	86990595	.	CT	C	1588.43	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.077;DP=377;FS=8.108;HRun=3;HaplotypeScore=83.7229;InbreedingCoeff=0.8573;MQ=50.97;MQ0=7;MQRankSum=-8.621;QD=21.18;ReadPosRankSum=1.411;VQSLOD=2.5922;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:45.83:0,46,503	1/1:0,8:10:29.89:271,30,0	0/0:7,0:3:6.02:0,6,82	0/0:8,0:6:0.02:0,0,91	0/0:23,0:23:48.05:0,48,507	0/0:20,0:20:60.20:0,60,829	0/0:16,0:16:45.13:0,45,612	0/0:14,0:13:39.13:0,39,521	0/0:17,0:17:48.15:0,48,655	1/1:1,17:19:52.86:564,53,0	1/1:2,20:23:65.40:579,65,0	0/0:16,0:16:22.01:0,22,286	0/0:9,0:9:9.60:0,10,122	0/0:9,0:9:14.66:0,15,202	0/0:18,0:18:51.17:0,51,709	0/0:6,0:6:18.06:0,18,251	1/1:14,8:21:9.58:329,10,0	0/0:10,0:9:27.05:0,27,340	0/0:11,0:10:30.10:0,30,404	0/0:6,0:6:18.06:0,18,244	0/0:9,0:9:21.07:0,21,285	0/0:8,0:7:21.06:0,21,275	0/0:15,1:16:33.50:0,33,392	0/0:14,0:13:33.07:0,33,394	0/0:7,0:7:18.06:0,18,254	0/0:13,0:13:27.09:0,27,368	0/0:12,0:12:36.09:0,36,455	0/0:4,0:4:12.03:0,12,148
chr10	86990599	.	C	CTTA	3084.28	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=11.007;DP=392;FS=8.844;HRun=0;HaplotypeScore=93.7631;InbreedingCoeff=0.8520;MQ=51.50;MQ0=5;MQRankSum=-6.248;QD=30.84;ReadPosRankSum=0.439;VQSLOD=3.2209;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:33.79:0,34,505	1/1:8,2:10:30.10:564,30,0	0/0:7,0:3:8.70:0,9,113	0/0:9,0:7:13.59:0,14,167	0/1:23,0:23:6.69:7,0,661	0/0:19,0:19:57.19:0,57,960	0/0:17,0:17:48.14:0,48,759	0/0:16,0:15:42.12:0,42,642	0/0:18,0:18:47.15:0,47,668	1/1:19,1:20:60.18:1039,60,0	1/1:22,1:23:66.18:1035,66,0	0/0:16,0:16:27.08:0,27,415	0/0:9,0:9:18.05:0,18,240	0/0:9,0:9:18.05:0,18,282	0/0:18,0:18:54.17:0,54,881	0/0:6,0:6:18.05:0,18,280	1/1:13,9:23:39.07:602,39,0	0/0:11,0:10:26.96:0,27,420	0/0:12,0:12:27.08:0,27,425	0/0:8,0:8:24.05:0,24,353	0/0:9,0:9:24.01:0,24,354	0/0:8,0:7:21.07:0,21,353	0/0:16,0:16:42.13:0,42,627	0/0:18,0:17:30.20:0,30,397	0/0:8,0:8:18.06:0,18,301	0/0:14,0:14:30.09:0,30,486	0/0:12,0:12:36.12:0,36,599	0/0:4,0:4:12.03:0,12,178
chr10	86990610	.	CT	C	526.76	PASS	AB=0.807;AC=4;AF=0.071;AN=56;BaseQRankSum=7.129;DP=432;FS=3.725;HRun=3;HaplotypeScore=88.3927;InbreedingCoeff=-0.0804;MQ=51.27;MQ0=5;MQRankSum=-6.133;QD=6.75;ReadPosRankSum=-2.961;VQSLOD=-0.3792;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:54.10:0,54,722	0/1:8,4:12:99:115,0,246	0/0:10,0:5:15.05:0,15,205	0/0:13,0:8:10.69:0,11,209	0/0:25,0:25:66.19:0,66,906	0/0:21,0:21:63.18:0,63,867	0/0:14,0:14:36.12:0,36,518	0/0:19,0:19:54.18:0,54,771	0/0:16,0:16:48.16:0,48,691	0/1:13,8:21:99:246,0,388	0/1:18,6:24:99:198,0,436	0/0:16,0:16:30.10:0,30,425	0/0:12,0:12:27.09:0,27,380	0/0:8,0:8:18.06:0,18,254	0/0:21,0:20:60.19:0,60,845	0/0:6,0:6:18.06:0,18,259	0/1:20,1:19:76.66:77,0,311	0/0:11,0:10:26.76:0,27,388	0/0:14,0:13:39.13:0,39,560	0/0:10,0:10:27.09:0,27,388	0/0:9,0:9:27.09:0,27,378	0/0:7,0:7:21.07:0,21,302	0/0:19,0:19:51.16:0,51,692	0/0:17,2:17:34.09:0,34,630	0/0:10,0:10:27.09:0,27,379	0/0:20,0:20:48.15:0,48,672	0/0:17,0:17:51.17:0,51,732	0/0:7,0:7:20.56:0,21,267
chr10	86992261	.	CTTAT	C	531.70	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.669;DP=369;FS=2.658;HRun=0;HaplotypeScore=58.2882;InbreedingCoeff=0.8324;MQ=75.93;MQ0=0;MQRankSum=-3.203;QD=37.98;ReadPosRankSum=-0.496;VQSLOD=3.4748;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:13:33.11:626,33,0	0/0:9,0:9:27.09:0,27,729	0/0:9,0:9:24.08:0,24,605	0/0:8,0:8:24.08:0,24,612	0/0:21,0:21:60.19:0,60,1544	0/0:24,0:24:69.24:0,69,1817	0/0:11,0:11:33.11:0,33,890	0/0:22,0:22:57.20:0,57,1539	0/0:7,0:7:21.07:0,21,567	0/0:20,0:20:51.18:0,51,1378	0/0:18,0:18:54.19:0,54,1458	0/0:11,0:11:30.10:0,30,785	0/0:8,0:8:24.08:0,24,648	0/0:5,0:5:12.04:0,12,324	0/0:10,0:10:30.10:0,30,780	0/0:9,0:9:27.09:0,27,729	0/0:27,0:26:75.26:0,75,1989	0/0:12,0:12:36.12:0,36,972	0/0:15,0:15:45.15:0,45,1181	0/0:17,0:17:48.16:0,48,1296	0/0:3,0:3:9.03:0,9,243	0/0:4,0:4:12.04:0,12,324	0/0:14,0:14:39.13:0,39,1053	0/0:3,0:3:9.03:0,9,243	0/0:15,0:15:39.13:0,39,1053	0/0:21,0:21:63.22:0,63,1676	0/0:26,0:25:72.25:0,72,1910	0/0:6,0:6:18.06:0,18,486
chr10	86992866	.	CT	C	2371.21	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.753;DP=642;FS=2.230;HRun=2;HaplotypeScore=63.1827;InbreedingCoeff=0.9955;MQ=72.11;MQ0=0;MQRankSum=-2.122;QD=33.87;ReadPosRankSum=2.878;VQSLOD=4.0347;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,51:51:99:1792,138,0	0/0:7,0:7:21.07:0,21,315	0/0:17,0:17:45.15:0,45,647	0/0:22,0:22:65.96:0,66,837	0/0:24,0:24:72.24:0,72,1078	0/0:31,0:31:93.32:0,93,1393	0/0:20,0:20:60.19:0,60,875	0/0:31,0:30:90.29:0,90,1314	0/0:22,0:22:66.21:0,66,968	0/0:20,0:20:60.19:0,60,873	0/0:13,0:13:21.06:0,21,296	0/0:21,0:21:63.21:0,63,940	0/0:21,0:21:63.21:0,63,941	0/0:15,0:15:45.14:0,45,654	0/0:26,0:26:78.26:0,78,1166	0/0:29,0:29:87.28:0,87,1283	0/0:23,0:23:66.22:0,66,989	1/1:1,18:19:54.18:701,54,0	0/0:17,0:17:51.16:0,51,729	0/0:30,0:30:87.28:0,87,1285	0/0:35,0:35:99:0,105,1532	0/0:10,0:10:30.10:0,30,450	0/0:17,0:17:48.16:0,48,719	0/0:22,0:22:66.12:0,66,919	0/0:20,0:20:60.20:0,60,899	0/0:31,0:31:93.31:0,93,1374	0/0:33,0:33:99:0,99,1474	0/0:15,0:15:45.15:0,45,670
chr10	86993341	.	TA	T	1582.62	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.944;DP=442;FS=2.936;HRun=10;HaplotypeScore=48.3506;InbreedingCoeff=0.8885;MQ=71.27;MQ0=1;MQRankSum=1.760;QD=20.03;ReadPosRankSum=2.226;VQSLOD=4.5117;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,1:23:19.05:0,19,428	1/1:0,9:9:24:208,24,0	0/0:28,0:12:20.74:0,21,188	0/0:20,0:16:11.82:0,12,160	0/0:21,2:23:31.08:0,31,558	0/0:15,0:15:13.45:0,13,372	0/0:6,0:6:15.04:0,15,166	0/0:27,0:27:72.09:0,72,762	0/0:15,0:16:32.15:0,32,392	1/1:2,15:17:44.98:387,45,0	1/1:0,24:24:62.97:547,63,0	0/0:14,1:15:13.03:0,13,363	0/0:9,0:9:21.05:0,21,230	0/0:10,0:10:30.08:0,30,332	0/0:8,0:8:18.03:0,18,189	0/0:8,0:8:18.04:0,18,191	1/1:1,27:29:68.99:599,69,0	0/0:19,0:19:41.18:0,41,412	0/0:17,0:18:47.96:0,48,512	0/0:16,0:16:45.09:0,45,485	0/0:2,0:2:3.01:0,3,33	0/0:3,0:3:6.02:0,6,66	0/0:7,0:7:18.03:0,18,190	0/0:6,0:6:15.04:0,15,166	0/0:25,0:25:75.20:0,75,823	0/0:25,0:25:66.15:0,66,717	0/0:22,0:22:60.12:0,60,649	0/0:11,0:11:30.08:0,30,332
chr10	86993646	.	G	GTTA	16433.33	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-13.120;DP=587;FS=3.145;HRun=0;HaplotypeScore=74.4882;InbreedingCoeff=0.9746;MQ=85.77;MQ0=0;MQRankSum=-6.351;QD=59.54;ReadPosRankSum=-1.655;VQSLOD=5.9600;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:16:42.06:900,42,0	1/1:2,9:10:30.03:630,30,0	0/0:29,0:29:75.26:0,75,1233	0/0:13,0:12:35.91:0,36,526	0/0:32,0:32:90.29:0,90,1466	0/0:23,0:23:46.25:0,46,979	0/0:10,0:10:27.08:0,27,423	1/1:10,32:43:99:2652,123,0	0/0:20,0:20:57.19:0,57,949	1/1:3,25:29:81.24:1707,81,0	1/1:2,26:28:83.96:1637,84,0	0/0:14,0:14:39.12:0,39,618	0/0:26,0:26:72.20:0,72,1114	0/0:15,0:15:42.12:0,42,650	0/0:22,0:22:66.23:0,66,1094	0/0:20,0:20:60.18:0,60,947	1/1:1,16:18:42.14:939,42,0	1/1:1,3:4:3.01:68,3,0	1/1:3,10:14:39.07:784,39,0	1/1:0,24:24:72.25:1585,72,0	1/1:0,6:8:18.06:408,18,0	0/0:30,0:30:84.24:0,84,1342	0/0:20,0:20:57.19:0,57,949	0/0:14,0:14:42.14:0,42,699	0/0:23,0:23:69.24:0,69,1148	1/1:1,30:31:93.31:2042,93,0	1/1:4,30:34:90.31:1993,90,0	1/1:0,16:16:48.16:1088,48,0
chr10	86996157	.	C	CG	594.84	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=6.910;DP=450;FS=8.383;HRun=0;HaplotypeScore=81.1917;InbreedingCoeff=0.9134;MQ=48.90;MQ0=13;MQRankSum=-4.644;QD=19.19;ReadPosRankSum=0.939;VQSLOD=4.9713;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:84.28:0,84,1174	1/1:0,2:2:3.01:37,3,0	./.	./.	0/0:22,0:21:51.17:0,51,713	0/0:27,0:26:75.25:0,75,1048	0/0:15,0:14:39.13:0,39,545	0/0:31,0:24:63.13:0,63,834	0/0:30,0:30:84.26:0,84,1156	1/1:1,9:9:15.05:210,15,0	1/1:1,9:8:18.06:253,18,0	0/0:9,0:9:27.09:0,27,377	0/0:17,0:17:51.17:0,51,713	0/0:10,0:10:26.83:0,27,377	0/0:19,0:18:54.16:0,54,736	0/0:25,0:25:72.24:0,72,1007	1/1:1,8:7:18.06:239,18,0	0/0:15,0:13:30.10:0,30,419	0/0:17,0:14:39.10:0,39,524	0/0:18,0:18:48.16:0,48,671	0/0:15,0:13:39.13:0,39,545	0/0:7,0:7:21.07:0,21,294	0/0:6,0:6:12.04:0,12,167	0/0:30,0:30:68.02:0,68,963	0/0:12,0:10:24.08:0,24,336	0/0:20,1:20:11.05:0,11,661	0/0:30,0:30:72.24:0,72,999	0/0:6,0:5:15.05:0,15,210
chr10	86996416	.	TTG	T	1549.69	PASS	AB=0.988;AC=18;AF=0.333;AN=54;BaseQRankSum=4.293;DP=418;FS=10.290;HRun=0;HaplotypeScore=113.2898;InbreedingCoeff=0.3903;MQ=66.81;MQ0=7;MQRankSum=-3.188;QD=6.65;ReadPosRankSum=-6.074;VQSLOD=0.3434;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:23:24.79:89,0,25	./.	0/1:24,0:12:6.69:7,0,67	0/0:21,0:12:15.51:0,16,182	0/0:30,0:30:84.23:0,84,1275	0/0:15,0:15:38.87:0,39,512	0/0:9,0:9:24.02:0,24,285	1/1:28,0:27:39.16:402,39,0	0/0:16,0:16:41.92:0,42,528	0/1:18,0:18:7.06:90,0,7	0/1:8,0:8:0.72:39,0,1	0/0:7,0:7:20.85:0,21,230	0/0:8,0:8:23.98:0,24,326	0/0:4,0:4:2.24:0,2,124	0/0:12,0:12:21.07:0,21,339	0/0:25,0:24:59.84:0,60,761	0/1:16,0:16:3.45:86,0,3	0/1:14,1:15:9.56:77,0,10	1/1:20,2:22:28.24:401,28,0	1/1:11,3:14:15.04:172,15,0	1/1:4,0:3:3.01:41,3,0	0/0:5,0:5:14.95:0,15,158	0/0:9,0:9:25.86:0,26,331	0/0:5,0:5:14.95:0,15,176	0/0:19,0:19:41.91:0,42,841	1/1:25,1:26:9.48:246,9,0	0/1:26,1:27:26.33:63,0,26	0/1:8,0:8:6.05:14,0,6
chr10	86996418	.	G	GTTTTTGTTTT	13185.51	PASS	AB=1.000;AC=25;AF=0.463;AN=54;BaseQRankSum=2.401;DP=412;FS=31.085;HRun=0;HaplotypeScore=145.4713;InbreedingCoeff=0.8891;MQ=64.99;MQ0=8;MQRankSum=-9.493;QD=55.87;ReadPosRankSum=-2.323;VQSLOD=2.7910;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:21:29.77:844,30,0	./.	0/1:23,0:10:5.20:5,0,66	0/0:21,0:12:17.58:0,18,298	0/0:29,0:29:84.21:0,84,2502	0/0:14,0:14:38.90:0,39,894	0/0:8,0:8:24.07:0,24,573	1/1:7,16:31:59.37:1850,59,0	0/0:15,0:15:42.09:0,42,1125	1/1:8,0:18:51.14:1474,51,0	1/1:5,0:8:18.02:402,18,0	0/0:7,0:7:20.96:0,21,463	0/0:8,0:8:24.07:0,24,627	0/0:4,0:4:12.04:0,12,321	0/0:9,0:9:21.07:0,21,672	0/0:23,0:22:60.15:0,60,1440	1/1:9,0:16:43.82:882,44,0	1/1:8,1:15:45.07:1222,45,0	1/1:6,10:24:68.92:1808,69,0	1/1:5,6:15:26.94:530,27,0	1/1:1,0:2:3.01:42,3,0	0/0:5,0:5:15.03:0,15,311	0/0:9,0:9:26.68:0,27,631	0/0:5,0:5:14.97:0,15,370	0/0:19,0:19:57.18:0,57,1652	1/1:7,14:27:66.09:2283,66,0	1/1:4,15:25:35.72:1522,36,0	1/1:0,6:8:6.02:322,6,0
chr10	86996419	.	TG	T	1744.76	PASS	AB=0.894;AC=25;AF=0.463;AN=54;BaseQRankSum=12.484;DP=380;FS=23.332;HRun=1;HaplotypeScore=101.8024;InbreedingCoeff=0.6767;MQ=65.28;MQ0=8;MQRankSum=-10.573;QD=8.39;ReadPosRankSum=-1.306;VQSLOD=-0.4707;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:28.12:211,28,0	./.	0/1:22,1:10:8.03:8,0,46	0/0:21,0:13:3.99:0,4,119	0/0:30,0:30:87.09:0,87,979	0/0:14,0:14:39.02:0,39,431	0/0:8,0:8:24:0,24,235	1/1:22,3:24:7.22:339,7,0	0/0:15,0:15:38.99:0,39,394	1/1:18,0:18:44.75:235,45,0	1/1:8,0:7:16.25:83,16,0	0/0:7,0:7:14.72:0,15,183	0/0:8,0:8:21.03:0,21,234	0/1:3,1:4:25.11:25,0,80	0/0:7,0:7:21.06:0,21,249	0/0:23,0:22:59.72:0,60,590	1/1:16,0:16:40.12:213,40,0	1/1:14,0:14:24.84:154,25,0	1/1:15,1:16:40.31:280,40,0	0/1:11,1:12:18.10:71,0,18	1/1:3,0:2:2.94:18,3,0	0/0:5,0:5:14.94:0,15,132	0/0:9,0:9:5.73:0,6,227	0/0:5,0:5:14.98:0,15,153	0/0:19,0:19:42.43:0,42,636	1/1:23,0:23:14.18:167,14,0	1/1:19,0:19:22.83:125,23,0	1/1:6,0:6:3.37:17,3,0
chr10	86996420	.	G	GT	431.85	PASS	AB=0.940;AC=19;AF=0.352;AN=54;BaseQRankSum=9.580;DP=380;FS=6.850;HRun=13;HaplotypeScore=112.1141;InbreedingCoeff=0.3058;MQ=65.04;MQ0=8;MQRankSum=-9.445;QD=2.12;ReadPosRankSum=1.632;VQSLOD=0.1482;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:36.41:36,0,62	./.	0/0:24,0:10:8.70:0,9,49	0/0:21,0:13:6.89:0,7,41	0/0:28,2:30:18.74:0,19,416	0/0:14,0:14:26.66:0,27,183	0/0:8,0:8:8.86:0,9,62	0/1:26,0:25:33.19:33,0,52	0/0:12,0:14:30.81:0,31,196	1/1:18,0:18:27.13:116,27,0	1/1:8,0:7:11.30:43,11,0	0/0:5,0:6:13.93:0,14,88	0/0:7,0:8:13.89:0,14,88	0/0:4,0:4:7.17:0,7,44	0/0:8,0:8:20.78:0,21,144	0/1:18,4:21:17:17,0,187	1/1:16,0:16:28.22:116,28,0	1/1:14,0:14:12.65:99,13,0	0/1:16,0:16:11.49:21,0,11	0/0:12,0:12:5.89:0,6,46	0/0:3,0:2:2.74:0,3,12	0/0:5,0:5:5.93:0,6,41	0/1:8,1:9:12.21:12,0,84	0/1:4,1:5:15.94:16,0,50	0/0:16,1:18:24.79:0,25,307	0/1:24,0:24:30.24:30,0,41	1/1:19,0:19:14.61:62,15,0	1/1:6,0:6:2.80:8,3,0
chr10	86996421	.	T	TTTTTG	3042.13	PASS	AB=1.000;AC=18;AF=0.333;AN=54;BaseQRankSum=10.664;DP=383;FS=20.490;HRun=0;HaplotypeScore=134.8088;InbreedingCoeff=0.5729;MQ=62.12;MQ0=8;MQRankSum=-10.421;QD=16.53;ReadPosRankSum=0.722;VQSLOD=1.9077;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:99:194,0,112	./.	0/0:23,0:9:8.09:0,8,38	0/0:23,0:13:11.04:0,11,153	0/0:30,0:30:81.24:0,81,1501	0/0:14,0:14:39.09:0,39,616	0/0:8,0:8:21.03:0,21,290	0/1:27,0:26:63.68:223,0,64	0/0:14,0:14:36.11:0,36,641	1/1:17,1:18:36.58:441,37,0	1/1:9,0:8:13.08:117,13,0	0/0:6,0:6:17.95:0,18,297	0/0:8,0:8:21.05:0,21,345	0/0:4,0:4:12:0,12,189	0/0:8,0:8:24.07:0,24,458	0/0:21,0:20:51.10:0,51,831	1/1:15,0:15:23.03:250,23,0	1/1:7,4:15:29.39:626,29,0	1/1:16,0:16:0.72:271,1,0	0/1:12,0:12:26.68:145,0,27	0/0:3,0:2:2.22:0,2,7	0/0:4,0:4:12:0,12,172	0/0:10,0:10:24.04:0,24,386	0/0:5,0:5:15.04:0,15,225	0/0:18,0:18:54.04:0,54,1031	0/1:25,0:25:4.69:473,0,5	1/1:19,1:20:24.89:391,25,0	1/1:6,0:6:6.02:96,6,0
chr10	86996422	.	T	TTTTG	2523.80	PASS	AB=0.990;AC=16;AF=0.296;AN=54;BaseQRankSum=10.414;DP=383;FS=25.465;HRun=0;HaplotypeScore=126.8005;InbreedingCoeff=0.4403;MQ=60.66;MQ0=8;MQRankSum=-8.206;QD=13.57;ReadPosRankSum=0.820;VQSLOD=1.6739;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:74.21:74,0,106	./.	0/0:22,0:8:8.81:0,9,69	0/0:23,0:13:14.78:0,15,184	0/0:30,0:30:81.21:0,81,1372	0/0:14,0:14:39.10:0,39,602	0/0:8,0:8:21.04:0,21,274	0/1:26,0:25:99:127,0,113	0/0:13,0:13:36.11:0,36,597	1/1:10,8:19:41.55:674,42,0	1/1:6,1:8:14.97:180,15,0	0/0:6,0:6:18.02:0,18,283	0/0:7,0:7:21.05:0,21,317	0/0:4,0:4:12:0,12,170	0/0:8,0:8:24.07:0,24,419	0/0:21,0:20:51.05:0,51,759	1/1:11,4:18:25.21:454,25,0	0/1:14,1:15:1.46:286,0,1	0/1:15,0:15:37.43:162,0,37	0/1:12,0:12:38.22:58,0,38	0/0:3,0:2:2.88:0,3,15	0/0:4,0:4:12:0,12,160	0/0:10,0:10:24.04:0,24,357	0/0:6,0:6:15.02:0,15,216	0/0:18,0:18:54.16:0,54,958	0/1:25,0:25:55.35:316,0,55	1/1:20,0:20:20.70:304,21,0	1/1:6,0:6:6.02:68,6,0
chr10	86996424	.	T	TTG	545.62	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=9.623;DP=364;FS=17.556;HRun=0;HaplotypeScore=112.6441;InbreedingCoeff=0.3806;MQ=62.69;MQ0=9;MQRankSum=-7.234;QD=3.87;ReadPosRankSum=1.629;VQSLOD=1.5231;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,5:20:17.02:271,17,0	./.	0/0:22,0:8:7.70:0,8,42	0/0:24,0:14:15.30:0,15,169	0/0:29,0:29:80.88:0,81,1120	0/0:14,0:14:42.10:0,42,540	0/0:8,0:8:21.03:0,21,242	0/0:18,0:17:15.52:0,16,307	0/0:12,0:12:36.10:0,36,490	1/1:20,0:20:25.08:165,25,0	0/1:9,0:7:5.04:50,0,5	0/0:6,0:6:18.01:0,18,230	0/0:7,0:7:21.05:0,21,263	0/0:4,0:4:11.99:0,12,139	0/0:8,0:8:24.07:0,24,344	0/0:20,0:19:50.73:0,51,625	1/1:17,0:17:0.68:105,1,0	0/1:15,0:15:47.27:47,0,88	0/1:14,0:14:13.52:14,0,137	0/0:10,0:10:11.20:0,11,149	0/0:3,0:2:3.01:0,3,32	0/0:4,0:4:12:0,12,139	0/0:10,0:10:26.83:0,27,306	0/0:6,0:6:17.87:0,18,201	0/0:18,0:18:54.01:0,54,766	0/1:22,0:22:6.64:7,0,163	0/1:18,0:18:31.35:31,0,38	1/1:6,0:6:3.63:11,4,0
chr10	86996437	.	GTTTATTTA	G	2979.67	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=8.979;DP=336;FS=14.672;HRun=0;HaplotypeScore=124.7446;InbreedingCoeff=0.8151;MQ=56.81;MQ0=6;MQRankSum=-8.539;QD=20.84;ReadPosRankSum=-1.533;VQSLOD=2.1841;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:42.14:0,42,1496	1/1:1,0:1:3:25,3,0	0/1:16,0:7:7.02:7,0,127	0/0:20,0:12:15.46:0,15,280	0/0:27,0:27:51.09:0,51,1649	0/0:11,0:11:27.09:0,27,1070	0/0:4,0:4:9.01:0,9,208	1/1:10,6:16:32.92:576,33,0	0/0:12,0:12:27.06:0,27,809	1/1:17,0:17:26.64:229,27,0	1/1:10,0:8:20.91:165,21,0	0/0:9,0:9:21.06:0,21,700	0/0:9,0:9:21.07:0,21,789	0/0:4,0:4:9.03:0,9,287	0/0:10,0:10:24.08:0,24,939	0/0:16,0:15:30.09:0,30,1136	1/1:17,0:17:23.91:186,24,0	0/0:16,0:16:36.12:0,36,1470	1/1:12,1:13:24:421,24,0	1/1:5,3:8:20.90:316,21,0	1/1:3,0:2:2.97:20,3,0	0/0:3,0:3:6.02:0,6,252	0/0:9,0:9:17.95:0,18,408	0/0:5,0:5:9.03:0,9,378	0/0:18,0:18:45.15:0,45,1767	1/1:14,6:20:41.87:726,42,0	1/1:12,4:16:35.89:513,36,0	1/1:5,0:5:0.89:2,1,0
chr10	86996443	.	T	TGC	615.89	PASS	AB=0.938;AC=8;AF=0.143;AN=56;BaseQRankSum=6.169;DP=334;FS=1.388;HRun=0;HaplotypeScore=97.9196;InbreedingCoeff=-0.0299;MQ=58.10;MQ0=5;MQRankSum=-4.180;QD=7.51;ReadPosRankSum=-1.249;VQSLOD=2.7935;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.16:0,48,762	1/1:2,0:2:2.22:7,2,0	0/0:17,0:6:6.92:0,7,88	0/0:21,0:14:12.95:0,13,256	0/0:27,0:27:75.24:0,75,1192	0/0:10,0:10:30.10:0,30,486	0/0:5,0:5:15.04:0,15,223	0/1:18,0:18:37.39:37,0,347	0/0:11,0:11:33.11:0,33,539	0/0:18,0:17:25.30:0,25,365	0/0:11,0:9:0.62:0,1,113	0/0:9,0:9:24.08:0,24,392	0/0:8,0:8:24.08:0,24,389	0/0:4,0:4:12.04:0,12,193	0/0:10,0:10:30.10:0,30,490	0/0:17,0:16:45.15:0,45,730	0/0:17,0:17:32.95:0,33,430	0/0:15,0:15:42.12:0,42,649	0/1:11,2:13:99:253,0,131	0/1:7,0:7:10.49:10,0,156	0/0:2,0:2:3.01:0,3,44	0/0:2,0:2:6.02:0,6,98	0/0:9,0:9:24.08:0,24,383	0/0:5,0:5:12.04:0,12,196	0/0:18,0:18:54.18:0,54,881	0/1:18,2:20:71.21:165,0,71	0/1:14,3:17:19.59:256,0,20	0/1:5,0:5:11.50:12,0,29
chr10	86996451	.	TTATTTA	T	3067.03	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=10.106;DP=349;FS=11.826;HRun=0;HaplotypeScore=106.6214;InbreedingCoeff=0.3553;MQ=54.48;MQ0=7;MQRankSum=-8.238;QD=18.48;ReadPosRankSum=0.842;VQSLOD=2.3095;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.15:0,45,1434	1/1:1,3:3:6.02:108,6,0	0/1:14,0:5:4.63:5,0,157	0/0:19,0:13:25.92:0,26,435	0/0:25,0:25:63.13:0,63,1628	0/0:9,0:9:27.09:0,27,901	0/0:7,0:7:18.04:0,18,312	0/1:24,0:24:99:267,0,187	0/0:10,0:10:27.06:0,27,703	1/1:3,16:18:45.10:866,45,0	1/1:3,8:9:27.04:542,27,0	0/0:7,0:7:21.07:0,21,627	0/0:9,0:9:27.09:0,27,766	0/0:6,0:6:18.06:0,18,383	0/0:9,0:9:27.09:0,27,875	0/0:17,0:16:45.14:0,45,1210	1/1:6,13:18:23.98:431,24,0	0/0:14,0:14:42.14:0,42,1315	0/1:17,0:17:99:206,0,202	0/1:12,0:12:99:176,0,139	0/1:3,0:3:5.33:14,0,5	0/0:2,0:2:6.02:0,6,210	0/0:7,0:7:20.96:0,21,432	0/0:5,0:5:15.05:0,15,401	0/0:16,0:16:48.16:0,48,1542	0/1:22,0:22:58.59:345,0,59	0/1:21,0:21:99:280,0,108	./.
chr10	86997603	.	A	AT	602.93	PASS	AB=0.831;AC=7;AF=0.125;AN=56;BaseQRankSum=2.780;DP=623;FS=34.487;HRun=0;HaplotypeScore=60.1822;InbreedingCoeff=0.0811;MQ=53.52;MQ0=49;MQRankSum=2.218;QD=5.07;ReadPosRankSum=3.497;VQSLOD=1.6637;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:53.65:0,54,416	0/0:13,0:13:32.21:0,32,224	0/0:85,0:13:23.56:0,24,138	0/0:112,0:23:21.76:0,22,150	0/0:29,0:28:76.53:0,77,603	0/0:18,0:18:53.74:0,54,447	0/0:8,0:8:20.81:0,21,161	0/1:30,0:26:99:230,0,102	0/0:17,0:17:44.33:0,44,339	0/0:12,0:10:26.75:0,27,199	0/0:21,0:21:47.41:0,47,354	0/0:13,0:13:37.51:0,38,311	0/0:10,0:10:17.84:0,18,130	0/0:8,0:8:20.39:0,20,149	0/0:16,0:16:41.39:0,41,326	0/0:14,0:14:36.29:0,36,285	0/0:21,0:19:38.80:0,39,306	0/0:12,0:11:24.90:0,25,165	0/1:18,4:19:46:247,0,46	0/1:19,0:17:87.71:88,0,110	1/1:4,0:4:3.15:57,3,0	0/0:6,0:5:9:0,9,80	0/0:17,0:16:44.71:0,45,348	0/0:9,0:7:17.96:0,18,152	0/0:10,0:10:29.13:0,29,204	0/1:13,7:19:83.57:84,0,146	0/1:8,14:22:24.94:25,0,60	0/0:20,12:28:11.11:0,11,247
chr10	86999896	.	CA	C	1208.70	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.748;DP=517;FS=9.488;HRun=2;HaplotypeScore=53.7012;InbreedingCoeff=0.9791;MQ=76.88;MQ0=0;MQRankSum=-0.648;QD=32.67;ReadPosRankSum=-0.175;VQSLOD=2.4580;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:99:1304,102,0	0/0:15,0:15:45.15:0,45,674	0/0:15,0:15:24.73:0,25,372	0/0:10,0:10:24.05:0,24,312	0/0:28,0:28:78.24:0,78,1129	0/0:18,0:18:54.18:0,54,809	0/0:32,0:32:96.32:0,96,1432	0/0:26,0:26:78.22:0,78,1080	0/0:13,0:13:33.11:0,33,495	0/0:19,0:19:57.18:0,57,822	0/0:13,0:13:36.12:0,36,540	0/0:26,0:26:78.26:0,78,1168	0/0:12,0:12:33.11:0,33,495	0/0:23,0:23:66.17:0,66,944	0/0:16,0:16:48.14:0,48,681	0/0:15,0:15:45.14:0,45,655	0/0:16,0:16:39.11:0,39,556	0/0:21,0:21:57.18:0,57,833	0/0:13,0:13:27.09:0,27,405	0/0:17,0:17:51.16:0,51,744	0/0:22,0:22:63.19:0,63,905	0/0:6,0:6:15.05:0,15,225	0/0:13,0:13:39.13:0,39,585	0/0:22,0:22:63.21:0,63,944	0/0:17,0:17:51.17:0,51,764	0/0:17,0:17:51.16:0,51,744	0/0:20,0:20:60.19:0,60,881	0/0:15,0:15:45.12:0,45,632
chr10	86999970	.	GCACACA	G	967.15	PASS	AB=0.712;AC=11;AF=0.220;AN=50;BaseQRankSum=3.327;DP=441;FS=1.588;HRun=0;HaplotypeScore=108.5552;InbreedingCoeff=0.5714;MQ=55.80;MQ0=11;MQRankSum=-1.541;QD=7.11;ReadPosRankSum=-1.010;VQSLOD=2.2904;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,7:38:2.07:206,0,2	0/0:11,0:11:12.04:0,12,187	./.	./.	0/0:14,0:15:15.05:0,15,399	0/0:12,0:12:24.07:0,24,584	0/0:26,0:25:29.90:0,30,713	0/0:17,0:14:0:0,0,0	0/0:10,0:11:20.99:0,21,539	0/0:15,0:14:21.01:0,21,322	0/0:11,0:11:6.02:0,6,115	0/0:18,0:20:25.31:0,25,782	0/0:9,0:10:17.23:0,17,497	0/0:20,0:20:22.84:0,23,681	0/0:7,0:7:12.04:0,12,301	0/0:11,0:12:20.97:0,21,470	0/0:4,0:18:6.02:0,6,111	1/1:24,0:27:20.12:365,20,0	1/1:9,0:9:2.68:44,3,0	./.	1/1:25,1:26:5.68:76,6,0	0/0:10,0:11:9.03:0,9,255	0/0:8,0:10:15.05:0,15,290	0/0:28,0:32:51.17:0,51,1361	0/0:13,0:12:21.07:0,21,571	0/1:10,10:21:38.55:353,0,39	0/1:5,4:9:0.10:0,0,0	1/1:1,2:3:3.01:61,3,0
chr10	87000770	.	T	TA	1867.70	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=1.774;DP=636;FS=3.429;HRun=11;HaplotypeScore=74.9307;InbreedingCoeff=0.9783;MQ=68.31;MQ0=2;MQRankSum=0.124;QD=20.30;ReadPosRankSum=0.796;VQSLOD=4.6871;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:28:48.89:0,49,141	1/1:4,10:14:21.04:213,21,0	0/0:25,0:21:8.33:0,8,215	0/0:16,0:14:28.85:0,29,191	0/0:30,1:32:79.64:0,80,604	0/0:18,0:17:47.79:0,48,366	0/0:12,0:14:30.97:0,31,221	0/0:29,0:30:61.56:0,62,456	0/0:19,0:20:58.82:0,59,447	1/1:2,22:24:63.07:618,63,0	1/1:0,17:18:47.93:471,48,0	0/0:13,0:13:26.88:0,27,209	0/0:26,0:26:62.74:0,63,485	0/0:20,0:20:50.78:0,51,393	0/0:29,0:29:77.67:0,78,601	0/0:25,0:24:58.81:0,59,447	1/1:8,28:35:54.86:725,55,0	0/0:18,0:19:25.94:0,26,263	0/0:25,0:26:49.77:0,50,371	0/0:20,0:22:64.13:0,64,460	0/0:27,0:27:68.61:0,69,526	0/0:17,0:18:44.32:0,44,333	0/0:24,0:24:65.70:0,66,504	0/0:18,1:19:29.90:0,30,289	0/0:28,0:27:74.68:0,75,578	0/0:24,1:25:26.30:0,26,384	0/0:29,0:29:80.68:0,81,624	0/0:11,0:11:23.16:0,23,172
chr10	87002313	.	TTAG	T	191.76	PASS	AC=6;AF=0.200;AN=30;BaseQRankSum=0.589;DP=64;FS=6.463;HRun=0;HaplotypeScore=14.1625;InbreedingCoeff=0.4243;MQ=34.66;MQ0=6;MQRankSum=-2.561;QD=23.97;ReadPosRankSum=2.307;VQSLOD=2.1493;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	0/0:5,0:5:15.05:0,15,335	0/0:4,2:5:5.21:0,5,105	0/0:2,0:2:6.02:0,6,85	1/1:1,0:1:0.89:2,1,0	1/1:0,5:5:15.05:240,15,0	./.	0/0:1,1:2:1.92:0,2,69	0/0:2,0:2:3.01:0,3,37	0/0:8,4:12:8.79:0,9,247	./.	./.	1/1:2,0:2:4.83:45,5,0	0/0:1,0:1:3:0,3,25	0/0:2,0:1:3.01:0,3,30	./.	0/0:3,0:3:3.48:0,3,66	./.	./.	0/0:1,1:1:0.47:0,0,1	./.	0/0:4,1:4:12.04:0,12,272	./.	0/0:2,0:2:5.99:0,6,48
chr10	87005867	.	T	TAA	200.86	PASS	AB=0.588;AC=2;AF=0.036;AN=56;BaseQRankSum=-0.076;DP=308;FS=21.460;HRun=13;HaplotypeScore=62.1530;InbreedingCoeff=0.1393;MQ=63.94;MQ0=0;MQRankSum=1.305;QD=7.17;ReadPosRankSum=1.759;VQSLOD=-0.3134;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:5,13:19:2.87:230,0,3	0/0:5,0:6:2.82:0,3,71	0/0:7,0:7:2.86:0,3,24	0/0:10,0:8:3.48:0,3,32	0/0:17,0:17:17.70:0,18,203	0/0:11,0:12:23.60:0,24,196	0/0:9,0:9:20.96:0,21,185	0/0:19,0:19:35.84:0,36,316	0/0:10,0:10:23.96:0,24,211	0/0:15,0:15:23.87:0,24,211	0/0:7,0:7:14.98:0,15,132	0/0:8,0:9:26.42:0,26,208	0/0:10,0:10:14.83:0,15,132	0/0:10,0:10:8.80:0,9,79	0/0:10,0:10:17.88:0,18,158	0/0:8,0:8:17.91:0,18,158	0/0:15,0:15:23.86:0,24,207	0/1:3,1:9:10.42:59,0,10	0/0:13,0:15:29.04:0,29,264	0/0:10,0:11:13.25:0,13,114	0/0:6,0:6:11.97:0,12,106	0/0:4,0:4:5.96:0,6,53	0/0:6,0:7:8.68:0,9,64	0/0:10,0:10:17.86:0,18,158	0/0:12,0:12:20.91:0,21,181	0/0:18,0:19:38.53:0,39,328	0/0:13,0:14:29.93:0,30,264	0/0:7,0:7:11.92:0,12,105
chr10	87005936	.	CG	C	7831.05	PASS	AB=0.538;AC=53;AF=0.946;AN=56;BaseQRankSum=-4.110;DP=250;FS=3.036;HRun=1;HaplotypeScore=257.8598;InbreedingCoeff=0.3405;MQ=45.78;MQ0=0;MQRankSum=-1.068;QD=31.45;ReadPosRankSum=4.561;VQSLOD=4.2210;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:1,6:7:3.15:132,0,3	1/1:0,5:5:12.04:152,12,0	1/1:2,1:3:5.23:49,5,0	0/0:1,0:1:2.94:0,3,18	1/1:1,13:14:35.06:379,35,0	1/1:1,19:20:29.34:522,29,0	1/1:0,8:8:24.08:301,24,0	1/1:1,18:19:57.18:750,57,0	1/1:0,9:9:27.09:339,27,0	1/1:1,19:20:39.31:602,39,0	1/1:2,3:5:13.84:135,14,0	1/1:2,7:9:25.32:292,25,0	1/1:0,10:10:18.12:311,18,0	1/1:0,7:7:21.07:261,21,0	1/1:0,11:11:26.63:369,27,0	1/1:0,7:7:17.68:203,18,0	1/1:0,2:2:6.02:75,6,0	1/1:0,3:3:9.03:117,9,0	1/1:0,5:5:15.04:183,15,0	1/1:1,13:14:37.32:448,37,0	1/1:1,2:3:5.99:58,6,0	1/1:0,7:7:16.55:211,17,0	1/1:1,6:7:21.05:253,21,0	1/1:3,4:7:15.03:172,15,0	1/1:0,5:5:15.05:185,15,0	1/1:1,19:20:52.96:650,53,0	1/1:2,17:19:48.01:562,48,0	1/1:0,3:3:9.03:120,9,0
chr10	87005943	.	AG	A	7077.35	PASS	AB=0.538;AC=53;AF=0.946;AN=56;BaseQRankSum=-5.955;DP=259;FS=2.216;HRun=1;HaplotypeScore=316.4200;InbreedingCoeff=0.1812;MQ=46.33;MQ0=0;MQRankSum=-0.140;QD=27.43;ReadPosRankSum=5.629;VQSLOD=3.7910;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:1,6:7:6.16:99,0,6	1/1:0,5:5:12.04:152,12,0	1/1:2,2:4:5.51:51,6,0	0/0:0,0:1:1.25:0,1,3	1/1:1,13:14:26.02:299,26,0	1/1:0,18:18:20.31:404,20,0	1/1:0,6:6:13.86:156,14,0	1/1:1,20:21:63.05:757,63,0	1/1:0,9:9:27.09:339,27,0	1/1:0,20:20:33.85:572,34,0	1/1:3,3:6:10.40:108,10,0	1/1:1,8:9:23.86:257,24,0	1/1:0,12:12:8.57:261,9,0	1/1:0,9:9:24.18:269,24,0	1/1:0,11:11:19.95:322,20,0	1/1:1,8:9:17.46:203,17,0	1/1:0,4:4:1.65:70,2,0	1/1:0,3:3:9.03:116,9,0	1/1:0,4:4:12.03:140,12,0	1/1:0,14:14:40.24:448,40,0	1/1:1,1:2:3.48:38,3,0	1/1:0,7:7:16.56:212,17,0	1/1:0,7:7:11.96:220,12,0	1/1:1,4:5:12.04:147,12,0	1/1:0,9:9:16.58:191,17,0	1/1:0,22:22:40.80:617,41,0	1/1:1,17:18:44.97:508,45,0	1/1:0,3:3:9.03:120,9,0
chr10	87005962	.	AC	A	1602.65	PASS	AB=0.537;AC=47;AF=0.870;AN=54;BaseQRankSum=-7.223;DP=269;FS=6.087;HRun=1;HaplotypeScore=420.2409;InbreedingCoeff=0.0885;MQ=39.36;MQ0=0;MQRankSum=1.847;QD=6.02;ReadPosRankSum=2.895;VQSLOD=0.3503;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:0,8:8:9.07:14,0,9	1/1:0,9:9:1.41:51,1,0	0/0:1,0:2:2.65:0,3,48	./.	1/1:0,11:11:4.07:51,4,0	1/1:0,20:20:9.42:114,9,0	1/1:0,7:7:14.39:50,14,0	1/1:0,18:18:52.01:288,52,0	1/1:0,10:10:14.88:64,15,0	1/1:0,16:16:16.62:154,17,0	1/1:0,7:7:9.21:43,9,0	1/1:0,8:8:15.77:56,16,0	1/1:0,13:13:0.98:45,1,0	1/1:0,12:12:7.23:37,7,0	0/1:1,13:14:0.24:57,0,0	1/1:0,12:12:4.56:34,5,0	0/1:0,4:4:0.11:8,0,0	1/1:0,3:3:7.84:34,8,0	0/1:2,2:4:4.18:25,0,4	1/1:0,13:13:13.60:122,14,0	1/1:0,2:2:0.47:1,0,0	0/1:0,6:6:3.13:24,0,3	1/1:0,6:6:8.12:63,8,0	1/1:0,5:4:6.39:23,6,0	1/1:0,11:11:18.53:79,19,0	1/1:0,21:21:2.28:74,2,0	1/1:0,21:21:32.34:139,32,0	1/1:0,5:5:9.71:57,10,0
chr10	87005970	.	AG	A	2210.04	PASS	AB=0.537;AC=44;AF=0.815;AN=54;BaseQRankSum=-6.624;DP=283;FS=2.331;HRun=4;HaplotypeScore=471.1296;InbreedingCoeff=-0.0202;MQ=35.90;MQ0=0;MQRankSum=-0.591;QD=7.86;ReadPosRankSum=3.954;VQSLOD=0.2241;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:1,7:8:9.08:45,0,9	0/1:0,8:8:1.15:57,0,1	0/0:2,0:2:1.12:0,1,39	./.	0/1:1,10:11:1.01:67,0,1	0/1:3,18:21:6.53:118,0,7	1/1:2,6:8:10.62:56,11,0	1/1:7,12:19:27.95:231,28,0	1/1:1,10:11:19.26:154,19,0	1/1:3,16:19:11.33:148,11,0	1/1:1,6:7:6.40:32,6,0	1/1:1,7:8:17.57:108,18,0	1/1:0,15:15:0.56:106,1,0	1/1:0,12:12:13:135,13,0	1/1:1,15:16:4.37:146,4,0	1/1:0,14:14:5.29:91,5,0	0/1:1,3:4:1.39:17,0,1	1/1:0,3:3:8.21:54,8,0	0/1:0,5:5:5.70:10,0,6	1/1:1,13:14:11.47:160,11,0	1/1:1,1:2:0.47:1,0,0	0/1:0,6:6:2.42:52,0,2	0/1:2,3:5:0.13:35,0,0	1/1:0,4:3:2.98:22,3,0	1/1:1,11:12:7.22:83,7,0	1/1:2,19:21:0.47:121,0,0	1/1:4,19:23:31.34:210,31,0	1/1:0,5:5:9.24:58,9,0
chr10	87005974	.	AG	A	2750.16	PASS	AB=0.556;AC=45;AF=0.833;AN=54;BaseQRankSum=-6.942;DP=252;FS=2.363;HRun=3;HaplotypeScore=448.0530;InbreedingCoeff=-0.0483;MQ=36.66;MQ0=0;MQRankSum=-0.617;QD=10.91;ReadPosRankSum=1.047;VQSLOD=0.5920;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:0,8:8:8.99:59,0,9	0/1:0,8:8:1.07:70,0,1	0/1:2,0:2:0:1,0,0	./.	0/1:0,10:10:0.43:85,0,0	0/1:0,18:18:5.07:155,0,5	1/1:0,6:6:10.74:65,11,0	1/1:0,12:12:29.85:282,30,0	1/1:0,10:10:19.36:178,19,0	1/1:0,16:16:12.41:184,12,0	1/1:0,6:6:6.41:36,6,0	1/1:1,6:7:17.75:132,18,0	1/1:0,15:15:4.29:141,4,0	1/1:0,12:12:13.12:162,13,0	1/1:0,15:15:4.59:183,5,0	1/1:0,14:14:6.02:112,6,0	0/1:0,3:3:1.37:22,0,1	1/1:0,3:3:8.23:63,8,0	0/1:0,5:5:3.65:13,0,4	1/1:0,13:13:12.10:200,12,0	1/1:0,1:1:0.47:1,0,0	0/1:0,6:6:2.19:44,0,2	0/1:0,3:3:0.10:44,0,0	1/1:0,4:3:3:26,3,0	1/1:0,11:11:8.61:103,9,0	1/1:0,19:19:0.77:154,1,0	1/1:0,20:20:32.62:259,33,0	1/1:0,5:5:9.57:70,10,0
chr10	87005980	.	CA	C	2370.82	PASS	AB=0.516;AC=44;AF=0.815;AN=54;BaseQRankSum=-5.588;DP=276;FS=5.161;HRun=1;HaplotypeScore=489.3552;InbreedingCoeff=-0.0246;MQ=36.06;MQ0=0;MQRankSum=-0.520;QD=8.65;ReadPosRankSum=-1.638;VQSLOD=0.6198;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:1,8:9:11.88:45,0,12	0/1:0,8:8:1.12:60,0,1	1/1:2,0:2:1.25:3,1,0	./.	0/1:0,11:11:0.54:74,0,1	0/1:0,19:19:3.52:127,0,4	1/1:0,6:6:10.73:61,11,0	1/1:1,17:18:23.24:238,23,0	1/1:0,12:12:24.72:183,25,0	1/1:0,17:17:6.90:139,7,0	1/1:0,7:7:9.22:43,9,0	1/1:0,9:9:20.65:138,21,0	1/1:0,15:15:2.07:120,2,0	1/1:1,11:12:10.19:140,10,0	1/1:0,15:15:4.44:158,4,0	1/1:1,13:14:2.73:79,3,0	0/1:0,3:3:1.37:21,0,1	1/1:0,3:3:8.16:49,8,0	0/1:0,7:7:4.78:5,0,13	1/1:0,13:13:8.69:146,9,0	0/0:0,2:2:0.73:0,1,2	0/1:2,4:6:5.31:19,0,5	0/1:0,3:3:0.11:40,0,0	1/1:0,4:3:2.99:24,3,0	1/1:0,12:12:10.95:106,11,0	1/1:1,19:20:0.78:134,1,0	1/1:0,22:22:28.11:248,28,0	1/1:0,7:7:12.31:76,12,0
chr10	87005996	.	AG	A	1873.03	PASS	AB=0.500;AC=37;AF=0.712;AN=52;BaseQRankSum=-4.354;DP=214;FS=2.396;HRun=1;HaplotypeScore=452.1883;InbreedingCoeff=0.0328;MQ=28.95;MQ0=0;MQRankSum=1.048;QD=9.18;ReadPosRankSum=-5.257;VQSLOD=0.2787;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:0,6:6:6.16:0,6,30	0/1:0,7:7:4.03:54,0,4	./.	./.	0/1:0,11:11:0.97:80,0,1	0/1:0,16:16:10.73:118,0,11	1/1:0,4:4:4.74:13,5,0	1/1:0,8:8:15.13:78,15,0	1/1:0,6:6:7.36:78,7,0	0/1:0,13:13:3.14:119,0,3	1/1:0,7:7:6.36:29,6,0	1/1:0,9:9:23.42:194,23,0	0/1:0,12:12:3.75:86,0,4	1/1:0,8:8:1.23:76,1,0	0/1:0,11:11:7.39:89,0,7	1/1:0,13:13:3.76:103,4,0	0/0:0,2:2:0.78:0,1,5	1/1:0,3:3:8.24:84,8,0	0/0:0,2:2:3.37:0,3,9	1/1:0,9:9:0.25:97,0,0	1/1:0,3:3:0.26:1,0,0	0/1:0,4:4:5.19:24,0,5	0/1:0,3:3:0.10:43,0,0	1/1:0,4:3:2.97:25,3,0	1/1:0,11:11:11.20:112,11,0	0/1:0,16:16:7.64:116,0,8	1/1:0,19:19:20.92:240,21,0	1/1:0,7:7:15.46:139,15,0
chr10	87006000	.	AG	A	1877.62	PASS	AB=0.500;AC=37;AF=0.712;AN=52;BaseQRankSum=-4.401;DP=214;FS=1.489;HRun=1;HaplotypeScore=452.1666;InbreedingCoeff=0.0322;MQ=28.95;MQ0=0;MQRankSum=-0.630;QD=9.20;ReadPosRankSum=-5.512;VQSLOD=0.2747;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:0,6:6:6.16:0,6,30	0/1:0,7:7:4.03:54,0,4	./.	./.	0/1:0,11:11:0.97:79,0,1	0/1:0,16:16:10.73:117,0,11	1/1:0,4:4:4.74:13,5,0	1/1:0,8:8:15.13:78,15,0	1/1:0,6:6:7.36:78,7,0	0/1:0,13:13:3.14:118,0,3	1/1:0,7:7:7.91:33,8,0	1/1:0,9:9:23.42:193,23,0	0/1:0,12:12:3.87:86,0,4	1/1:0,8:8:1.23:76,1,0	0/1:0,11:11:7.39:89,0,7	1/1:0,13:13:3.67:101,4,0	0/0:0,2:2:0.78:0,1,5	1/1:0,3:3:8.24:84,8,0	0/0:0,2:2:3.37:0,3,9	1/1:0,9:9:0.30:100,0,0	1/1:0,3:3:0.83:3,1,0	0/1:0,4:4:5.19:24,0,5	0/1:0,3:3:0.10:42,0,0	1/1:0,4:3:4.55:29,5,0	1/1:0,11:11:11.20:112,11,0	0/1:0,16:16:7.65:115,0,8	1/1:0,19:19:20.62:239,21,0	1/1:0,7:7:15.46:139,15,0
chr10	87006004	.	AC	A	1963.48	PASS	AB=0.500;AC=37;AF=0.712;AN=52;BaseQRankSum=-4.428;DP=214;FS=2.361;HRun=1;HaplotypeScore=451.8329;InbreedingCoeff=0.0153;MQ=28.95;MQ0=0;MQRankSum=1.267;QD=9.62;ReadPosRankSum=-5.754;VQSLOD=0.3081;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:0,6:6:6.16:0,6,30	0/1:0,7:7:4.01:55,0,4	./.	./.	0/1:0,11:11:0.94:85,0,1	0/1:0,16:16:10.70:121,0,11	1/1:0,4:4:4.74:13,5,0	1/1:0,8:8:15.13:78,15,0	1/1:0,6:6:7.37:80,7,0	0/1:0,13:13:3.14:118,0,3	1/1:0,7:7:9.36:51,9,0	1/1:0,9:9:23.42:196,23,0	0/1:0,12:12:3.33:88,0,3	1/1:0,8:8:1.23:78,1,0	0/1:0,11:11:7.36:95,0,7	1/1:0,13:13:3.67:104,4,0	0/0:0,2:2:0.78:0,1,5	1/1:0,3:3:8.24:86,8,0	0/0:0,2:2:3.37:0,3,9	1/1:0,9:9:0.30:103,0,0	1/1:0,3:3:1.40:18,1,0	0/1:0,4:4:5.11:29,0,5	0/1:0,3:3:0.10:44,0,0	1/1:0,4:3:4.52:25,5,0	1/1:0,11:11:11.31:119,11,0	0/1:0,16:16:7.69:113,0,8	1/1:0,19:19:20.64:247,21,0	1/1:0,7:7:15.47:141,15,0
chr10	87006009	.	AG	A	3520.35	PASS	AB=0.500;AC=42;AF=0.808;AN=52;BaseQRankSum=-5.144;DP=258;FS=4.285;HRun=1;HaplotypeScore=500.3608;InbreedingCoeff=0.1815;MQ=28.96;MQ0=0;MQRankSum=-1.056;QD=14.25;ReadPosRankSum=-6.699;VQSLOD=-0.0166;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:0,7:7:8.94:0,9,33	0/1:0,8:8:3.85:72,0,4	./.	./.	1/1:0,12:12:0.41:120,0,0	0/1:0,18:18:3.90:233,0,4	1/1:0,7:7:7.75:46,8,0	1/1:0,13:13:14.14:141,14,0	1/1:0,6:6:7.38:94,7,0	1/1:0,18:18:11.92:312,12,0	1/1:0,11:11:12.43:105,12,0	1/1:0,10:10:26.66:272,27,0	0/1:0,12:12:1.30:122,0,1	1/1:0,9:9:1.26:104,1,0	1/1:0,14:14:1.70:232,2,0	1/1:1,15:16:13.42:234,13,0	0/0:0,2:2:0.78:0,1,5	1/1:0,3:3:8.24:89,8,0	0/0:0,2:2:3.37:0,3,9	1/1:0,9:9:0.63:150,1,0	1/1:0,3:3:1.85:29,2,0	0/1:0,4:4:4.90:53,0,5	1/1:0,6:6:2.93:106,3,0	1/1:0,5:4:3.01:33,3,0	1/1:0,14:14:12.58:153,13,0	1/1:0,22:22:11.23:355,11,0	1/1:0,20:20:23.51:310,24,0	1/1:0,7:7:15.64:154,16,0
chr10	87006655	.	A	AGTTGTGT	6451.15	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-6.583;DP=516;FS=2.489;HRun=0;HaplotypeScore=110.6734;InbreedingCoeff=0.9876;MQ=78.51;MQ0=0;MQRankSum=-10.095;QD=61.44;ReadPosRankSum=0.546;VQSLOD=5.1064;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,12:17:30.10:1023,30,0	1/1:1,6:8:15.01:440,15,0	0/0:21,0:21:45.11:0,45,932	0/0:19,0:19:42.14:0,42,991	0/0:22,0:22:60.19:0,60,1387	0/0:22,0:22:63.22:0,63,1529	0/0:15,0:15:42.13:0,42,941	0/0:39,0:39:86.07:0,86,1935	0/0:16,0:16:33.11:0,33,814	1/1:11,19:31:57.11:1953,57,0	1/1:3,18:22:39.13:1452,39,0	0/0:25,0:25:72.24:0,72,1667	0/0:18,0:18:51.18:0,51,1239	0/0:13,0:13:36.12:0,36,881	0/0:22,0:22:51.17:0,51,1197	0/0:16,0:16:42.13:0,42,987	1/1:8,13:21:30.10:1138,30,0	1/1:4,2:6:12.04:446,12,0	0/0:16,0:15:36.11:0,36,817	0/0:18,0:18:54.17:0,54,1251	0/0:31,0:31:81.25:0,81,1810	0/0:9,0:9:21.07:0,21,489	0/0:14,0:14:39.11:0,39,909	0/0:25,0:25:72.23:0,72,1649	0/0:12,0:12:36.11:0,36,812	0/0:20,0:20:54.19:0,54,1294	0/0:12,0:12:33.11:0,33,814	0/0:6,0:6:18.06:0,18,418
chr10	87006785	.	TTA	T	1544.85	PASS	AB=0.857;AC=9;AF=0.167;AN=54;BaseQRankSum=5.161;DP=302;FS=0.000;HRun=0;HaplotypeScore=45.4688;InbreedingCoeff=0.7677;MQ=60.93;MQ0=4;MQRankSum=-2.802;QD=24.14;ReadPosRankSum=0.464;VQSLOD=3.6722;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:46.56:0,47,596	1/1:2,4:6:14.79:190,15,0	0/0:9,0:3:6.02:0,6,73	0/0:7,0:6:8.72:0,9,84	0/0:12,0:12:26.96:0,27,342	0/0:15,0:15:41.48:0,41,587	0/0:8,0:7:21.04:0,21,273	0/0:37,0:37:97.39:0,97,1102	0/0:6,0:6:15.01:0,15,162	1/1:16,9:25:65.24:686,65,0	1/1:5,9:13:32.73:389,33,0	0/0:7,0:7:14.93:0,15,158	0/0:10,0:10:21.03:0,21,300	0/0:3,0:3:8.99:0,9,74	0/0:9,0:8:24:0,24,320	0/0:11,0:11:32.94:0,33,392	1/1:4,9:13:33.94:430,34,0	0/0:10,0:9:21.68:0,22,265	0/0:17,0:17:48.73:0,49,504	0/0:4,0:4:11.75:0,12,109	0/1:5,1:6:9.49:9,0,168	0/0:3,0:3:9:0,9,97	0/0:3,1:4:5.96:0,6,45	./.	0/0:11,0:10:27.49:0,27,356	0/0:14,1:15:32.76:0,33,347	0/0:15,0:15:44.91:0,45,558	0/0:7,0:6:15.05:0,15,219
chr10	87006805	.	C	CT	708.99	PASS	AB=0.718;AC=10;AF=0.192;AN=52;BaseQRankSum=7.699;DP=325;FS=6.258;HRun=10;HaplotypeScore=47.3804;InbreedingCoeff=0.6052;MQ=47.72;MQ0=10;MQRankSum=-4.507;QD=11.25;ReadPosRankSum=1.985;VQSLOD=2.4033;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:53.80:0,54,433	0/1:3,4:7:3.75:113,0,4	./.	./.	0/0:14,0:14:14.94:0,15,123	0/0:14,0:14:17.93:0,18,148	0/0:9,0:8:20.94:0,21,169	0/0:33,0:32:37.82:0,38,335	0/0:6,0:6:8.96:0,9,74	1/1:11,6:17:18.05:192,18,0	1/1:7,9:15:30.79:304,31,0	0/0:7,0:7:11.98:0,12,99	0/0:12,0:12:11.83:0,12,93	0/0:8,0:8:11.94:0,12,98	0/0:9,0:7:11.91:0,12,93	0/0:13,0:13:29.93:0,30,246	1/1:11,6:18:3.89:196,4,0	0/0:13,0:13:29:0,29,227	0/0:19,0:18:29.92:0,30,242	0/0:7,0:6:5.95:0,6,49	0/1:2,1:4:20.92:21,0,44	0/0:2,0:2:5.99:0,6,49	0/0:6,0:6:8.66:0,9,71	1/1:0,1:1:3.01:32,3,0	0/0:13,0:12:20.69:0,21,170	0/0:15,0:15:25.94:0,26,200	0/0:18,0:18:26.24:0,26,220	0/0:7,0:6:11.92:0,12,96
chr10	87007043	.	AT	A	765.60	PASS	AB=0.830;AC=13;AF=0.232;AN=56;BaseQRankSum=4.720;DP=455;FS=6.818;HRun=13;HaplotypeScore=55.0818;InbreedingCoeff=0.4475;MQ=77.52;MQ0=0;MQRankSum=1.653;QD=4.91;ReadPosRankSum=4.373;VQSLOD=1.2175;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:10,5:15:41.92:87,0,42	1/1:0,2:3:8:50,8,0	0/1:13,1:14:12.96:19,0,13	0/0:9,0:9:5.38:0,5,36	0/0:24,0:26:26.73:0,27,424	0/0:15,0:17:47.70:0,48,423	0/0:13,1:16:16.82:0,17,299	0/0:28,0:28:47.95:0,48,430	0/0:13,0:13:30.03:0,30,286	1/1:12,14:26:31.75:222,32,0	0/1:18,9:27:27.66:145,0,28	0/0:6,0:9:23.71:0,24,204	0/0:20,0:20:42.05:0,42,397	0/0:16,0:17:37.07:0,37,317	0/0:14,1:15:20.13:0,20,344	0/1:17,3:20:26.75:27,0,230	1/1:7,9:16:26.74:196,27,0	1/1:0,7:7:20.88:153,21,0	0/0:21,0:23:9.10:0,9,325	0/0:18,0:23:40.96:0,41,385	0/0:11,0:12:23.19:0,23,251	0/0:6,0:6:17.97:0,18,158	0/0:4,0:4:8.22:0,8,61	0/0:14,1:15:14.15:0,14,299	0/0:11,0:11:30.01:0,30,273	0/0:21,1:22:35.10:0,35,465	0/1:23,5:28:40.29:40,0,445	0/0:13,0:13:33.04:0,33,315
chr10	87007981	.	GGA	G	282.27	PASS	AB=0.969;AC=7;AF=0.125;AN=56;BaseQRankSum=8.385;DP=375;FS=56.209;HRun=0;HaplotypeScore=53.1191;InbreedingCoeff=0.1563;MQ=76.12;MQ0=2;MQRankSum=-1.792;QD=3.21;ReadPosRankSum=7.843;VQSLOD=-0.5605;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:47.73:0,48,501	0/0:6,0:6:14.98:0,15,161	0/0:22,0:17:28.22:0,28,355	0/0:13,0:12:16.26:0,16,240	0/0:12,0:12:21.82:0,22,207	0/0:12,0:12:30:0,30,300	0/0:18,0:18:50.85:0,51,606	0/0:10,0:9:11.38:0,11,177	0/0:8,0:8:17.92:0,18,199	0/0:9,0:9:21.51:0,22,239	0/0:14,0:14:32.98:0,33,311	0/0:13,0:13:29.30:0,29,370	0/0:16,0:16:35.95:0,36,434	0/0:5,0:5:15.04:0,15,198	0/0:13,0:13:33.07:0,33,435	0/0:13,0:13:35.22:0,35,329	0/0:18,0:17:48.10:0,48,645	0/0:23,0:23:52.36:0,52,337	0/1:9,0:9:25.39:84,0,25	0/1:14,1:15:58.92:59,0,90	0/1:26,3:28:99:115,0,115	0/0:6,0:6:11.05:0,11,129	0/0:9,0:9:18.01:0,18,199	0/0:16,0:16:32.66:0,33,434	0/0:6,0:6:12.01:0,12,126	0/1:18,0:18:41.45:41,0,133	0/1:12,0:12:11.04:73,0,11	1/1:5,0:5:9.43:42,9,0
chr10	87010282	.	AT	A	1830.01	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=8.896;DP=374;FS=2.568;HRun=2;HaplotypeScore=35.2333;InbreedingCoeff=0.8502;MQ=66.94;MQ0=0;MQRankSum=-3.364;QD=32.11;ReadPosRankSum=-1.346;VQSLOD=2.7191;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.22:0,72,1049	1/1:0,6:6:18.06:233,18,0	0/1:5,0:5:11.09:11,0,106	0/0:8,0:8:21.03:0,21,278	0/0:17,0:17:51.15:0,51,723	0/0:24,0:24:72.20:0,72,1029	0/0:8,0:8:24.08:0,24,354	0/0:32,0:32:93.29:0,93,1323	0/0:14,0:14:39.12:0,39,564	1/1:1,13:14:39.13:505,39,0	1/1:0,12:12:36.12:466,36,0	0/0:12,0:12:36.12:0,36,539	0/0:11,0:11:30.10:0,30,443	0/0:9,0:9:27.09:0,27,404	0/0:13,0:13:39.12:0,39,565	0/0:16,0:16:48.14:0,48,679	1/1:0,20:20:60.20:777,60,0	0/0:9,0:9:24.08:0,24,358	0/0:14,0:14:42.14:0,42,629	0/0:13,0:13:39.13:0,39,578	0/0:5,0:5:15.05:0,15,225	0/0:4,0:4:12.04:0,12,180	0/0:6,0:6:15.05:0,15,225	0/0:9,0:9:27.08:0,27,385	0/0:21,0:21:63.21:0,63,943	0/0:23,0:23:69.23:0,69,1028	0/0:20,0:20:60.19:0,60,881	0/0:4,0:4:12.04:0,12,179
chr10	87010495	.	CT	C	1594.46	PASS	AB=0.803;AC=16;AF=0.286;AN=56;BaseQRankSum=4.303;DP=339;FS=2.423;HRun=12;HaplotypeScore=39.6419;InbreedingCoeff=0.5375;MQ=68.83;MQ0=16;MQRankSum=-1.405;QD=10.85;ReadPosRankSum=-1.344;VQSLOD=2.0667;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:22:35.64:0,36,208	0/0:2,0:2:3.01:0,3,30	0/0:23,0:7:0:0,0,0	0/1:23,0:11:8.71:9,0,35	0/0:9,0:9:24.03:0,24,233	0/0:18,0:18:42.08:0,42,426	0/0:9,0:9:20.07:0,20,188	1/1:9,23:30:65.05:493,65,0	0/1:9,2:10:3:3,0,134	0/0:15,0:15:23.57:0,24,387	0/0:7,0:7:15.02:0,15,146	0/0:1,0:1:3.01:0,3,30	0/1:2,1:3:17.22:17,0,24	0/0:6,0:6:18.04:0,18,183	0/0:4,0:4:6.01:0,6,61	0/0:5,0:6:11.21:0,11,146	0/0:39,0:37:96.12:0,96,953	0/0:4,0:4:9.02:0,9,91	1/1:4,9:10:20.88:159,21,0	0/1:3,5:8:33.75:74,0,34	1/1:0,4:4:8.97:70,9,0	0/0:2,0:2:6.01:0,6,61	0/0:4,0:4:9.02:0,9,91	0/0:3,0:3:0:0,0,0	0/0:16,0:16:33.95:0,34,337	1/1:2,14:16:14.38:292,14,0	1/1:5,17:21:46.86:354,47,0	1/1:2,13:15:38.84:302,39,0
chr10	87011673	.	T	TC	2888.35	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=0.170;DP=522;FS=11.157;HRun=1;HaplotypeScore=51.9970;InbreedingCoeff=0.9949;MQ=70.00;MQ0=0;MQRankSum=-2.450;QD=36.10;ReadPosRankSum=1.788;VQSLOD=2.9061;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.18:0,57,725	1/1:0,12:12:30.05:401,30,0	0/0:15,0:10:21.02:0,21,228	0/0:10,0:10:18.02:0,18,195	0/0:27,0:27:81.21:0,81,984	0/0:19,0:19:46.24:0,46,671	0/0:16,0:16:45.12:0,45,553	0/0:24,0:24:63.19:0,63,783	0/0:22,0:22:66.19:0,66,818	1/1:1,25:26:78.25:1099,78,0	1/1:0,22:22:54.18:777,54,0	0/0:11,0:11:33.09:0,33,403	0/0:13,0:13:39.08:0,39,473	0/0:19,0:19:57.11:0,57,678	0/0:22,0:22:66.18:0,66,816	0/0:21,0:21:63.16:0,63,753	1/1:1,19:20:54.15:772,54,0	0/0:13,0:13:36.06:0,36,432	0/0:24,0:24:69.20:0,69,868	0/0:29,0:29:84.25:0,84,1061	0/0:9,0:9:27.09:0,27,349	0/0:7,0:7:21.04:0,21,235	0/0:20,0:20:60.13:0,60,719	0/0:15,0:15:45.10:0,45,528	0/0:28,0:28:81.22:0,81,1008	0/0:24,0:24:69.20:0,69,858	0/0:21,0:21:63.18:0,63,789	0/0:12,0:12:36.12:0,36,465
chr10	87012979	.	GA	G	2024.76	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.908;DP=605;FS=7.457;HRun=8;HaplotypeScore=58.4997;InbreedingCoeff=0.9864;MQ=70.56;MQ0=2;MQRankSum=0.576;QD=22.50;ReadPosRankSum=1.549;VQSLOD=4.1019;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.26:0,84,1014	1/1:1,6:7:18.03:174,18,0	0/0:21,1:15:23.12:0,23,205	0/0:13,0:11:11.62:0,12,107	0/0:29,0:29:81.22:0,81,952	0/0:29,0:29:81.25:0,81,979	0/0:14,0:14:42.12:0,42,497	0/0:27,1:28:43.24:0,43,804	0/0:22,0:22:57.16:0,57,677	1/1:1,22:23:66.06:620,66,0	1/1:3,30:33:81.12:782,81,0	0/0:16,0:16:42.12:0,42,498	0/0:32,0:32:93.29:0,93,1124	0/0:17,0:17:48.15:0,48,580	0/0:29,0:29:75.23:0,75,906	0/0:25,0:25:63.19:0,63,761	1/1:5,22:27:63.10:608,63,0	0/0:14,0:16:35.98:0,36,413	0/0:18,0:18:51.14:0,51,598	0/0:23,0:24:63.06:0,63,740	0/0:11,0:11:24.07:0,24,290	0/0:18,0:18:54.16:0,54,642	0/0:16,0:16:45.13:0,45,532	0/0:9,0:9:24.07:0,24,290	0/0:21,0:21:57.17:0,57,678	0/0:29,0:29:75.22:0,75,895	0/0:35,0:35:99:0,102,1232	0/0:11,0:11:30.09:0,30,363
chr10	87015323	.	A	AT	429.44	PASS	AB=0.543;AC=1;AF=0.018;AN=56;BaseQRankSum=-4.163;DP=458;FS=0.000;HRun=9;HaplotypeScore=45.5527;InbreedingCoeff=0.0085;MQ=73.21;MQ0=0;MQRankSum=-1.276;QD=17.18;ReadPosRankSum=1.023;VQSLOD=3.2635;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:4,21:25:18.01:504,0,18	0/0:4,0:4:11.97:0,12,99	0/0:17,0:16:20.98:0,21,182	0/0:12,0:11:20.99:0,21,181	0/0:20,0:20:53.98:0,54,468	0/0:23,0:23:65.97:0,66,569	0/0:19,0:19:38.95:0,39,330	0/0:27,0:27:62.94:0,63,541	0/0:11,0:10:23.98:0,24,208	0/0:17,0:17:41.98:0,42,362	0/0:15,0:15:35.98:0,36,312	0/0:13,0:13:32.99:0,33,286	0/0:12,0:12:32.96:0,33,280	0/0:20,0:20:50.95:0,51,437	0/0:19,0:19:56.97:0,57,491	0/0:15,0:15:35.98:0,36,312	0/0:20,0:20:52.35:0,52,487	0/0:12,0:12:29.79:0,30,248	0/0:21,0:22:56.02:0,56,475	0/0:21,0:21:53.97:0,54,465	0/0:10,0:10:23.99:0,24,208	0/0:12,0:12:26.98:0,27,234	0/0:16,0:16:41.99:0,42,365	0/0:23,0:23:65.93:0,66,566	0/0:17,0:17:38.99:0,39,339	0/0:13,0:13:35.99:0,36,313	0/0:15,0:15:32.95:0,33,278	0/0:8,0:8:24:0,24,208
chr10	87015429	.	GA	G	580.48	PASS	AB=0.881;AC=11;AF=0.196;AN=56;BaseQRankSum=7.225;DP=473;FS=4.216;HRun=14;HaplotypeScore=66.5813;InbreedingCoeff=0.4802;MQ=55.89;MQ0=12;MQRankSum=-0.735;QD=5.37;ReadPosRankSum=1.890;VQSLOD=2.4335;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,1:21:14.54:0,15,285	1/1:4,4:8:11.87:82,12,0	0/0:26,0:5:5.83:0,6,34	0/0:18,0:8:2.06:0,2,23	0/0:20,2:22:5.11:0,5,313	0/0:18,0:20:43.92:0,44,405	0/0:15,0:14:15:0,15,135	0/0:26,0:24:22.38:0,22,322	0/1:7,1:8:14.57:15,0,22	1/1:4,16:20:41.53:283,42,0	1/1:5,9:14:17.76:122,18,0	0/0:21,0:21:21.39:0,21,317	0/0:10,0:10:12.01:0,12,111	0/0:15,0:17:16.97:0,17,160	0/0:19,0:19:34.79:0,35,294	0/0:12,0:13:2.59:0,3,189	1/1:13,8:22:18.84:215,19,0	0/0:21,0:21:35.10:0,35,339	0/1:18,2:19:14.38:14,0,224	0/1:12,1:14:11.73:12,0,191	0/0:6,0:6:12.01:0,12,111	0/0:10,0:10:8.99:0,9,75	0/0:21,0:21:38.76:0,39,328	0/0:10,0:10:14.78:0,15,115	0/0:16,2:20:3.73:0,4,289	0/0:17,1:19:13.46:0,13,231	0/0:13,1:14:14.19:0,14,154	0/0:11,0:8:3.11:0,3,125
chr10	87015448	.	GA	G	423.87	PASS	AB=0.960;AC=3;AF=0.054;AN=56;BaseQRankSum=2.714;DP=488;FS=5.903;HRun=10;HaplotypeScore=61.2950;InbreedingCoeff=0.5469;MQ=62.84;MQ0=6;MQRankSum=0.158;QD=8.48;ReadPosRankSum=0.781;VQSLOD=1.8600;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:24:58.57:518,59,0	0/0:7,0:7:12.03:0,12,133	0/0:33,0:11:10.31:0,10,142	0/0:19,0:9:8.50:0,9,71	0/0:26,0:26:57.15:0,57,629	0/0:23,1:24:34.09:0,34,587	0/0:9,0:9:15.04:0,15,166	0/0:29,2:32:33.94:0,34,577	0/0:7,0:7:18.02:0,18,182	0/0:18,0:18:36.08:0,36,384	0/0:15,0:15:36.09:0,36,394	0/0:22,0:22:36.07:0,36,381	0/0:8,0:8:7.40:0,7,120	0/0:16,0:16:29.91:0,30,322	0/0:15,0:15:45.11:0,45,484	0/0:14,0:14:39.10:0,39,423	0/0:21,0:20:50.93:0,51,530	0/0:21,1:22:25.06:0,25,489	0/1:23,1:22:4.04:4,0,386	0/0:20,0:20:42.05:0,42,435	0/0:7,0:7:18.52:0,19,200	0/0:7,0:7:21.06:0,21,232	0/0:16,0:16:39.09:0,39,417	0/0:7,0:7:15.04:0,15,166	0/0:24,0:24:48.11:0,48,515	0/0:17,0:17:21.84:0,22,416	0/0:14,1:13:7:0,7,288	0/0:14,0:14:11.78:0,12,252
chr10	87015941	.	A	AAATT	18094.97	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-13.190;DP=580;FS=6.778;HRun=0;HaplotypeScore=87.0224;InbreedingCoeff=0.9908;MQ=75.26;MQ0=0;MQRankSum=-7.272;QD=64.39;ReadPosRankSum=-1.215;VQSLOD=6.2266;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:22:57.20:1471,57,0	1/1:1,4:5:12.04:320,12,0	0/0:20,0:19:40.60:0,41,677	0/0:19,0:16:31.39:0,31,466	0/0:26,0:26:69.22:0,69,1230	0/0:28,0:28:84.29:0,84,1560	0/0:10,0:10:30.06:0,30,513	1/1:10,31:44:99:2900,123,0	0/0:18,0:18:48.16:0,48,890	1/1:3,17:22:60.21:1516,60,0	1/1:0,19:21:54.18:1362,54,0	0/0:14,0:14:39.13:0,39,721	0/0:15,0:15:36.12:0,36,672	0/0:24,0:24:63.22:0,63,1150	0/0:22,0:22:63.22:0,63,1170	0/0:24,0:24:66.20:0,66,1192	1/1:2,20:23:54.19:1429,54,0	1/1:2,17:20:39.13:1016,39,0	1/1:5,18:23:69.24:1773,69,0	1/1:3,20:25:63.17:1539,63,0	1/1:2,7:11:21.07:560,21,0	0/0:18,0:18:48.16:0,48,877	0/0:20,0:20:54.18:0,54,979	0/0:21,0:21:57.20:0,57,1063	0/0:20,0:20:51.17:0,51,936	1/1:4,20:24:63.21:1614,63,0	1/1:6,30:36:90.26:2276,90,0	1/1:0,4:4:12.04:320,12,0
chr10	87016284	.	TCCC	T	715.12	PASS	AC=30;AF=0.833;AN=36;BaseQRankSum=3.230;DP=105;FS=4.694;HRun=11;HaplotypeScore=52.6784;InbreedingCoeff=0.4074;MQ=111.19;MQ0=1;MQRankSum=-3.934;QD=15.89;ReadPosRankSum=5.042;VQSLOD=0.8288;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:6:17.99:214,18,0	1/1:0,0:2:2.94:18,3,0	0/0:28,0:16:23.76:0,24,321	0/0:22,0:14:21.63:0,22,247	1/1:0,1:1:2.99:23,3,0	1/1:1,0:3:5.94:41,6,0	./.	./.	1/1:1,0:2:2.97:20,3,0	1/1:0,1:5:9.31:76,9,0	1/1:1,2:3:3.01:35,3,0	./.	./.	./.	./.	1/1:0,0:5:14.85:102,15,0	1/1:0,2:3:8.96:97,9,0	1/1:0,1:2:5.99:60,6,0	./.	1/1:0,1:1:3.01:39,3,0	./.	1/1:1,0:2:2.95:19,3,0	1/1:0,0:1:2.97:20,3,0	0/0:0,0:1:0:0,0,0	1/1:0,0:1:2.97:20,3,0	./.	./.	1/1:3,0:5:5.96:43,6,0
chr10	87017601	.	C	CT	189.27	PASS	AB=0.970;AC=3;AF=0.054;AN=56;BaseQRankSum=3.478;DP=623;FS=5.603;HRun=3;HaplotypeScore=76.5798;InbreedingCoeff=0.6550;MQ=70.01;MQ0=0;MQRankSum=-2.736;QD=4.40;ReadPosRankSum=-0.051;VQSLOD=0.1741;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:31,1:32:8.95:9,0,320	0/0:9,0:9:13.99:0,14,36	0/0:15,0:13:27.07:0,27,311	0/0:10,0:9:18.02:0,18,200	0/0:33,0:33:93.29:0,93,1115	0/0:24,0:24:72.22:0,72,863	0/0:13,0:13:33.10:0,33,396	0/0:34,0:33:93.16:0,93,1090	0/0:19,0:19:51.16:0,51,612	0/0:32,0:32:27.43:0,27,89	0/0:24,0:24:25.86:0,26,69	0/0:20,0:20:57.17:0,57,684	0/0:21,0:21:63.19:0,63,755	0/0:19,0:19:54.17:0,54,648	0/0:23,0:23:63.19:0,63,755	0/0:24,0:24:72.21:0,72,853	0/0:39,1:40:40.55:0,41,123	1/1:2,9:11:24.07:281,24,0	0/0:22,0:22:66.18:0,66,772	0/0:28,0:28:81.25:0,81,970	0/0:13,0:13:39.10:0,39,456	0/0:22,0:22:63.18:0,63,744	0/0:25,0:25:72.22:0,72,863	0/0:17,0:17:48.15:0,48,576	0/0:23,0:23:66.20:0,66,792	0/0:23,0:23:63.19:0,63,756	0/0:38,0:38:99:0,111,1331	0/0:9,0:9:18.06:0,18,215
chr10	87017604	.	TC	T	3991.01	PASS	AB=0.971;AC=11;AF=0.196;AN=56;BaseQRankSum=11.406;DP=615;FS=1.251;HRun=1;HaplotypeScore=62.9293;InbreedingCoeff=0.8839;MQ=65.61;MQ0=2;MQRankSum=-1.517;QD=26.97;ReadPosRankSum=-0.493;VQSLOD=3.2988;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,1:33:19.68:20,0,98	1/1:0,9:9:27.09:375,27,0	0/0:11,0:9:26.87:0,27,301	0/0:8,0:7:18:0,18,212	0/0:34,0:34:99:0,99,1277	0/0:24,0:24:72.21:0,72,969	0/0:12,0:12:33.11:0,33,459	0/0:36,0:34:92.51:0,93,1211	0/0:17,0:17:51.16:0,51,693	1/1:0,31:31:90.07:1175,90,0	1/1:7,19:26:66.03:837,66,0	0/0:19,0:19:57.19:0,57,795	0/0:21,0:21:63.21:0,63,876	0/0:19,0:19:57.16:0,57,761	0/0:22,0:22:66.19:0,66,883	0/0:24,0:24:72.23:0,72,987	1/1:1,38:39:99:1437,105,0	1/1:10,0:10:25.91:148,26,0	0/0:23,0:23:69.19:0,69,890	0/0:27,0:27:81.24:0,81,1093	0/0:13,0:13:39.11:0,39,526	0/0:22,0:21:63.21:0,63,875	0/0:27,0:27:81.18:0,81,1052	0/0:17,0:17:51.12:0,51,672	0/0:25,0:25:75.20:0,75,977	0/0:23,0:23:69.21:0,69,921	0/0:37,0:37:99:0,111,1548	0/0:6,0:6:18:0,18,195
chr10	87018377	.	TA	T	1620.48	PASS	AB=1.000;AC=20;AF=0.400;AN=50;BaseQRankSum=-0.523;DP=314;FS=0.000;HRun=13;HaplotypeScore=36.2595;InbreedingCoeff=0.5894;MQ=61.80;MQ0=19;MQRankSum=-0.963;QD=9.31;ReadPosRankSum=-1.207;VQSLOD=1.4806;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,11:13:29.78:217,30,0	0/1:5,0:5:8.07:8,0,39	0/1:26,0:6:2.62:22,0,3	0/0:27,0:9:8.82:0,9,62	0/0:18,0:20:52.24:0,52,454	0/0:16,0:16:35.94:0,36,323	./.	1/1:5,26:33:52.38:526,52,0	0/0:4,0:4:3:0,3,29	0/1:6,0:6:0.06:0,0,52	0/0:5,0:4:11.46:0,11,59	0/0:4,0:4:8.98:0,9,78	0/0:6,0:6:17.93:0,18,162	0/0:1,0:1:3:0,3,29	0/0:10,0:10:21.03:0,21,204	0/1:6,0:6:11.16:11,0,49	0/0:26,1:26:35.91:0,36,351	1/1:7,12:17:32.78:241,33,0	1/1:11,18:25:49.70:354,50,0	1/1:4,3:6:5.87:40,6,0	./.	./.	0/0:2,0:2:3:0,3,29	0/0:2,0:2:6.01:0,6,58	0/0:5,0:5:9.01:0,9,88	1/1:2,7:9:20.72:144,21,0	1/1:3,12:15:26.75:191,27,0	1/1:2,3:4:5.96:44,6,0
chr10	87019313	.	CT	C	717.36	PASS	AB=0.898;AC=18;AF=0.321;AN=56;BaseQRankSum=6.764;DP=519;FS=1.729;HRun=13;HaplotypeScore=60.1379;InbreedingCoeff=0.2259;MQ=56.33;MQ0=19;MQRankSum=-2.517;QD=2.89;ReadPosRankSum=0.352;VQSLOD=-0.7492;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,2:46:34.37:0,34,531	1/1:2,2:4:2.95:22,3,0	0/0:13,0:7:2.97:0,3,20	0/1:13,0:8:4.63:5,0,9	0/0:29,0:29:48.03:0,48,451	0/0:17,0:17:36.47:0,36,337	0/1:10,2:12:23.53:24,0,149	0/0:21,0:19:27.04:0,27,262	0/0:16,1:17:20.18:0,20,347	1/1:8,16:23:37.73:266,38,0	1/1:3,12:15:26.79:197,27,0	0/0:13,0:13:30.02:0,30,277	0/1:21,3:23:29.63:30,0,212	0/1:12,2:13:0.68:1,0,150	0/0:17,1:18:17.12:0,17,310	0/1:12,1:13:7.73:8,0,117	1/1:7,16:22:37.52:267,38,0	0/0:5,0:11:11.36:0,11,57	0/1:17,1:16:1.39:1,0,133	0/1:17,3:20:19.69:20,0,125	0/0:10,0:10:27.50:0,28,258	0/0:20,0:17:29.72:0,30,273	0/1:17,2:17:13.75:14,0,204	0/0:13,0:12:21.02:0,21,199	0/1:20,1:21:29.21:29,0,198	0/0:27,2:29:15.96:0,16,439	0/1:22,2:24:1.91:2,0,292	0/0:12,0:11:27.03:0,27,254
chr10	87019461	.	AG	A	2286.14	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.773;DP=548;FS=2.226;HRun=2;HaplotypeScore=53.6469;InbreedingCoeff=0.9975;MQ=84.82;MQ0=0;MQRankSum=-1.364;QD=32.66;ReadPosRankSum=1.661;VQSLOD=3.4775;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.29:0,87,1301	1/1:0,10:10:24.04:293,24,0	0/0:24,0:23:69.23:0,69,1027	0/0:22,0:22:63.16:0,63,900	0/0:18,0:18:54.18:0,54,808	0/0:18,0:18:54.18:0,54,809	0/0:14,0:14:42.13:0,42,608	0/0:33,0:33:96.28:0,96,1410	0/0:23,0:23:69.23:0,69,1016	1/1:1,18:19:54.15:674,54,0	1/1:0,18:18:51.17:662,51,0	0/0:17,0:17:48.15:0,48,701	0/0:22,0:22:66.22:0,66,989	0/0:11,0:11:30.09:0,30,430	0/0:22,0:22:63.20:0,63,922	0/0:26,0:26:69.21:0,69,1014	1/1:1,22:23:63.20:818,63,0	0/0:7,0:7:21.07:0,21,308	0/0:14,0:14:42.13:0,42,608	0/0:30,0:30:84.28:0,84,1257	0/0:24,0:24:69.23:0,69,1032	0/0:21,0:21:63.20:0,63,924	0/0:18,0:18:54.18:0,54,808	0/0:15,0:15:42.14:0,42,629	0/0:23,0:23:69.20:0,69,993	0/0:20,1:21:24.26:0,24,860	0/0:11,0:11:33.11:0,33,494	0/0:15,0:15:45.15:0,45,674
chr10	87020440	.	A	AT	1884.20	PASS	AB=0.764;AC=8;AF=0.143;AN=56;BaseQRankSum=-4.626;DP=543;FS=9.135;HRun=11;HaplotypeScore=70.4959;InbreedingCoeff=0.7181;MQ=76.13;MQ0=1;MQRankSum=-1.741;QD=16.38;ReadPosRankSum=0.549;VQSLOD=4.1917;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:12:31.91:0,32,238	0/1:4,7:12:5.37:118,0,5	0/0:15,0:16:22.53:0,23,144	0/0:24,0:21:27.80:0,28,158	0/0:25,0:25:62.73:0,63,487	0/0:18,0:18:43.87:0,44,331	0/0:11,0:11:17.91:0,18,139	0/0:26,1:26:38.27:0,38,285	0/0:7,0:7:14.93:0,15,116	1/1:3,22:27:45.54:599,46,0	1/1:6,28:34:55.76:729,56,0	0/0:21,0:21:49.83:0,50,377	0/0:16,0:16:41.83:0,42,325	0/0:17,0:17:28.41:0,28,230	0/0:17,0:17:32.21:0,32,313	0/0:23,1:24:23.02:0,23,352	1/1:4,25:29:39.89:584,40,0	0/0:18,0:19:26.35:0,26,309	0/0:18,0:19:45.64:0,46,337	0/0:30,0:30:74.67:0,75,578	0/0:10,0:10:20.91:0,21,163	0/0:11,0:11:23.86:0,24,181	0/0:11,0:11:26.88:0,27,209	0/0:11,0:11:14.93:0,15,116	0/0:17,0:17:38.82:0,39,302	0/0:26,2:29:0.85:0,1,361	0/0:35,0:36:82.67:0,83,632	0/1:12,1:13:3.52:4,0,159
chr10	87023993	.	AAG	A	3487.87	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.528;DP=511;FS=3.375;HRun=0;HaplotypeScore=58.4243;InbreedingCoeff=0.9912;MQ=78.48;MQ0=0;MQRankSum=-1.245;QD=42.02;ReadPosRankSum=1.991;VQSLOD=5.5518;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.18:0,54,991	1/1:0,16:16:48.16:707,48,0	0/0:19,0:19:52.42:0,52,930	0/0:6,0:6:15.05:0,15,277	0/0:36,0:36:99:0,108,1989	0/0:20,0:20:57.18:0,57,1027	0/0:19,0:19:54.18:0,54,996	0/0:15,0:15:45.15:0,45,815	0/0:26,0:26:75.26:0,75,1405	1/1:1,20:21:57.19:837,57,0	1/1:0,20:20:60.20:884,60,0	0/0:21,0:21:60.21:0,60,1117	0/0:20,0:20:60.21:0,60,1108	0/0:11,0:11:33.11:0,33,618	0/0:16,0:16:45.15:0,45,842	0/0:20,0:20:60.19:0,60,1085	1/1:2,24:26:72.24:1060,72,0	0/0:10,0:10:30.09:0,30,529	0/0:19,0:19:57.19:0,57,1035	0/0:25,0:25:75.26:0,75,1405	0/0:15,0:15:45.15:0,45,835	0/0:13,0:13:39.13:0,39,730	0/0:14,0:14:42.12:0,42,746	0/0:9,0:9:24.04:0,24,413	0/0:22,0:22:66.23:0,66,1233	0/0:21,1:22:16.02:0,16,1005	0/0:17,0:16:51.16:0,51,923	0/0:15,0:15:41.79:0,42,758
chr10	87024684	.	G	GTTTA	572.62	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=0.139;DP=578;FS=3.643;HRun=0;HaplotypeScore=109.5898;InbreedingCoeff=0.3164;MQ=57.74;MQ0=3;MQRankSum=-0.691;QD=5.90;ReadPosRankSum=-3.589;VQSLOD=1.3878;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:29.96:627,30,0	0/0:7,0:7:8.47:0,8,79	0/1:15,0:7:2.68:3,0,161	0/0:14,0:9:18.25:0,18,170	0/0:31,0:31:90.17:0,90,1413	0/0:22,0:22:60.14:0,60,996	0/0:16,0:16:45.10:0,45,682	0/1:15,0:15:1.55:2,0,156	0/0:12,0:12:33.06:0,33,497	0/0:25,0:25:57.90:0,58,536	0/0:29,0:29:24.13:0,24,641	0/0:18,0:18:51.07:0,51,713	0/0:9,0:9:27.03:0,27,400	0/0:11,0:11:30.05:0,30,456	0/0:25,0:25:69.22:0,69,1222	0/0:23,0:23:66.15:0,66,1088	0/0:26,0:26:41.95:0,42,570	0/0:22,0:22:14.41:0,14,358	0/0:21,0:19:18.11:0,18,264	0/0:30,0:30:23.98:0,24,601	0/1:11,0:11:5.96:6,0,133	0/0:14,0:14:36.09:0,36,583	0/0:24,0:24:69.21:0,69,1206	0/0:12,0:12:33.01:0,33,495	0/0:34,0:34:96.26:0,96,1642	0/0:39,0:39:55.59:0,56,769	0/1:27,0:27:48.52:49,0,440	0/0:17,0:17:18:0,18,364
chr10	87025384	.	A	AT	1720.93	PASS	AB=0.957;AC=10;AF=0.179;AN=56;BaseQRankSum=-7.748;DP=556;FS=1.622;HRun=9;HaplotypeScore=55.3711;InbreedingCoeff=0.6872;MQ=80.50;MQ0=0;MQRankSum=-0.981;QD=15.79;ReadPosRankSum=0.312;VQSLOD=3.6799;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:17.99:0,18,155	1/1:4,7:11:3.52:212,4,0	0/0:17,0:17:14.02:0,14,288	0/1:13,0:13:0.68:1,0,176	0/0:29,0:29:86.98:0,87,755	0/0:20,0:20:53.98:0,54,469	0/0:11,0:11:29.99:0,30,260	0/0:37,0:37:98.96:0,99,859	0/0:26,0:26:68.98:0,69,599	1/1:4,22:27:69.02:744,69,0	1/1:5,15:20:19.07:439,19,0	0/0:11,1:13:1.85:0,2,233	0/0:25,0:25:63.84:0,64,569	0/0:19,0:20:50:0,50,423	0/0:21,0:21:53.98:0,54,469	0/0:12,0:12:32.98:0,33,287	1/1:3,14:17:42.11:465,42,0	0/0:26,0:25:50.97:0,51,443	0/0:16,0:16:11.32:0,11,259	0/0:31,0:31:89.98:0,90,781	0/0:15,0:15:41.99:0,42,365	0/0:17,0:17:47.99:0,48,417	0/0:23,0:23:65.98:0,66,572	0/0:3,0:3:6:0,6,52	0/0:17,0:17:50.98:0,51,440	0/1:19,2:21:15.40:15,0,339	0/0:40,0:40:99:0,105,907	0/0:21,0:21:38.93:0,39,339
chr10	87028000	.	T	TA	1746	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-5.820;DP=555;FS=5.417;HRun=9;HaplotypeScore=73.3926;InbreedingCoeff=0.8240;MQ=74.70;MQ0=3;MQRankSum=0.160;QD=16.95;ReadPosRankSum=-1.462;VQSLOD=3.4655;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:29.97:0,30,260	1/1:4,4:8:21.06:232,21,0	0/0:31,0:19:23.36:0,23,265	0/1:28,0:17:14.40:14,0,122	0/0:33,0:33:83.96:0,84,729	0/0:20,0:20:53.97:0,54,469	0/0:15,0:15:35.96:0,36,312	0/0:27,0:27:45.57:0,46,504	0/0:17,0:17:41.73:0,42,351	1/1:3,15:18:16.04:396,16,0	1/1:1,26:27:72.03:743,72,0	0/0:21,0:21:44.95:0,45,390	0/0:22,0:22:50.92:0,51,439	0/0:14,0:14:2.68:0,3,184	0/0:27,0:27:71.97:0,72,625	0/0:16,0:16:32.98:0,33,286	1/1:2,19:22:31.51:523,32,0	0/0:13,0:13:32.62:0,33,263	0/0:21,0:21:47.96:0,48,413	0/0:18,0:18:53.79:0,54,456	0/0:9,0:9:20.99:0,21,182	0/0:15,0:16:35:0,35,289	0/0:17,0:17:41.99:0,42,365	0/0:19,0:19:34.22:0,34,423	0/0:25,0:25:62.94:0,63,539	0/0:19,0:19:47.96:0,48,414	0/0:25,0:25:47.95:0,48,415	0/0:11,0:11:29.86:0,30,254
chr10	87028014	.	C	CAA	468.90	PASS	AB=0.864;AC=4;AF=0.071;AN=56;BaseQRankSum=3.423;DP=609;FS=8.255;HRun=11;HaplotypeScore=94.7772;InbreedingCoeff=0.4695;MQ=73.95;MQ0=5;MQRankSum=-3.379;QD=7.81;ReadPosRankSum=-1.470;VQSLOD=0.6340;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:16:32.60:443,33,0	0/0:11,0:11:32.52:0,33,277	0/0:45,0:24:27.05:0,27,184	0/1:26,0:16:13.07:13,0,33	0/0:35,0:36:86.98:0,87,881	0/0:24,0:24:69.09:0,69,660	0/0:17,0:17:51.08:0,51,495	0/0:35,0:36:61.74:0,62,571	0/0:20,0:20:35.87:0,36,338	0/0:17,0:17:42.04:0,42,399	0/0:25,0:28:24.69:0,25,449	0/0:22,0:22:51.52:0,52,487	0/0:23,0:24:53.08:0,53,511	0/0:13,0:13:33:0,33,307	0/0:28,0:28:71.98:0,72,677	0/0:14,0:15:44.78:0,45,404	0/0:27,0:27:62.96:0,63,588	0/1:10,0:16:20.38:127,0,20	0/0:22,0:22:56.98:0,57,539	0/0:24,0:24:62.94:0,63,595	0/0:8,0:8:21.02:0,21,197	0/0:17,0:17:45.03:0,45,426	0/0:16,0:17:35.28:0,35,312	0/0:16,0:16:27.07:0,27,286	0/0:21,0:21:60.09:0,60,581	0/0:23,0:25:65.44:0,65,591	0/0:22,0:22:54.13:0,54,547	0/0:14,0:14:36.93:0,37,346
chr10	87028621	.	GATATATATATATATATATATATATATATAT	G	4369.10	PASS	AB=1.000;AC=19;AF=0.679;AN=28;BaseQRankSum=1.635;DP=152;FS=4.125;HRun=0;HaplotypeScore=118.5311;InbreedingCoeff=0.3702;MQ=59.23;MQ0=2;MQRankSum=-0.776;QD=39.72;ReadPosRankSum=1.635;VQSLOD=3.6059;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:6:3.01:49,3,0	1/1:5,0:5:1.55:4,2,0	./.	0/0:10,0:4:0.47:0,0,1	./.	./.	./.	0/1:25,0:25:25.73:344,0,26	./.	1/1:6,0:12:17.73:738,18,0	1/1:10,0:14:3.01:209,3,0	0/0:3,0:3:3.01:0,3,86	./.	0/0:2,0:2:3.01:0,3,45	./.	./.	./.	0/0:6,0:6:3.01:0,3,96	1/1:9,0:9:11.57:143,12,0	1/1:5,3:8:16.60:778,17,0	./.	./.	./.	./.	./.	1/1:5,2:8:12.03:845,12,0	1/1:7,0:7:3.01:57,3,0	1/1:6,9:16:29.28:1203,29,0
chr10	87028638	.	A	ACCAG	188.49	PASS	AB=0.949;AC=6;AF=0.200;AN=30;BaseQRankSum=-0.450;DP=104;FS=0.000;HRun=0;HaplotypeScore=72.7588;InbreedingCoeff=-0.3671;MQ=41.48;MQ0=3;MQRankSum=-3.182;QD=3.31;ReadPosRankSum=0.539;VQSLOD=1.3936;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:3.01:0,3,30	0/1:2,1:3:28.25:28,0,29	./.	0/0:12,0:3:0.47:0,0,1	./.	./.	./.	0/1:16,0:16:58.96:59,0,202	./.	0/1:8,0:8:18.93:19,0,112	0/0:10,1:11:2.94:0,3,18	0/0:2,0:2:6.02:0,6,104	./.	0/0:1,0:1:3.01:0,3,62	./.	0/0:1,0:1:3.01:0,3,46	./.	0/0:3,0:3:3.01:0,3,62	0/0:4,0:4:0.51:0,1,77	0/1:6,0:6:22.18:22,0,112	./.	./.	./.	./.	./.	0/1:8,0:8:64.76:65,0,156	0/0:6,0:6:4.82:0,5,47	0/1:15,1:16:91.29:91,0,93
chr10	87028640	.	A	ACCAG	979.43	PASS	AB=0.961;AC=12;AF=0.429;AN=28;BaseQRankSum=-3.396;DP=96;FS=0.000;HRun=0;HaplotypeScore=67.9625;InbreedingCoeff=-0.1943;MQ=40.79;MQ0=3;MQRankSum=-0.615;QD=14.19;ReadPosRankSum=-0.711;VQSLOD=2.5352;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:3.01:0,3,30	1/1:1,1:2:4.56:41,5,0	./.	0/0:13,0:4:0.47:0,0,1	./.	./.	./.	0/1:14,1:15:99:332,0,108	./.	0/1:6,0:6:66.25:118,0,66	1/1:8,0:8:3:29,3,0	0/0:2,0:2:6.02:0,6,124	./.	0/0:1,0:1:3.01:0,3,62	./.	./.	./.	0/0:4,0:4:5.64:0,6,105	0/1:4,0:4:21.26:50,0,21	0/1:6,0:6:65.42:95,0,65	./.	./.	./.	./.	./.	0/1:7,1:8:86.94:189,0,87	1/1:4,0:4:3:28,3,0	0/1:15,1:16:70.06:200,0,70
chr10	87028642	.	A	ACCAG	1333.79	PASS	AB=0.844;AC=11;AF=0.393;AN=28;BaseQRankSum=-4.916;DP=87;FS=1.144;HRun=0;HaplotypeScore=60.9961;InbreedingCoeff=-0.0420;MQ=40.99;MQ0=3;MQRankSum=-0.751;QD=24.70;ReadPosRankSum=-1.531;VQSLOD=3.1757;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:3.01:0,3,30	1/1:2,0:2:1.55:4,2,0	./.	0/0:12,0:4:0.47:0,0,1	./.	./.	./.	0/1:2,4:9:9.71:425,0,10	./.	0/1:6,0:6:46.45:46,0,69	0/0:6,1:7:3.11:0,3,9	0/0:2,0:2:6.02:0,6,125	./.	0/0:1,0:1:3.01:0,3,45	./.	./.	./.	0/0:5,0:5:9.03:0,9,169	1/1:0,3:4:12.03:220,12,0	0/1:5,1:6:14.29:156,0,14	./.	./.	./.	./.	./.	0/1:7,0:7:36.58:179,0,37	1/1:0,2:4:3.01:76,3,0	0/1:12,4:16:41.94:331,0,42
chr10	87029589	.	GT	G	405.78	PASS	AB=0.911;AC=7;AF=0.125;AN=56;BaseQRankSum=5.709;DP=373;FS=3.141;HRun=13;HaplotypeScore=51.7857;InbreedingCoeff=0.4807;MQ=81.84;MQ0=0;MQRankSum=0.200;QD=5.97;ReadPosRankSum=0.629;VQSLOD=1.7983;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,17:25:4.72:276,5,0	0/0:8,0:8:15.01:0,15,140	0/1:18,0:15:4.38:4,0,20	0/0:15,0:14:14.79:0,15,129	0/0:15,1:16:17.15:0,17,328	0/0:19,1:20:25.86:0,26,384	0/0:9,1:10:5.14:0,5,212	0/0:28,1:32:48.92:0,49,555	0/0:6,0:6:11.70:0,12,116	0/0:16,1:17:14.08:0,14,281	0/0:22,0:22:44.97:0,45,418	0/1:6,1:7:0.88:1,0,148	0/0:7,0:7:12.02:0,12,117	0/0:6,0:6:18.01:0,18,169	0/0:6,0:6:14.73:0,15,120	0/0:9,0:9:26.99:0,27,252	0/0:11,0:11:30:0,30,277	1/1:1,11:12:32.76:235,33,0	0/0:13,0:13:26.99:0,27,244	0/0:15,1:16:14.05:0,14,274	0/1:5,1:6:6.80:7,0,102	0/0:7,0:10:26.55:0,27,218	0/0:13,0:13:30.04:0,30,288	0/0:7,0:7:18.03:0,18,175	0/0:13,1:14:16.46:0,16,294	0/0:21,0:21:51:0,51,475	0/0:10,0:9:20.96:0,21,188	0/0:16,0:16:27.78:0,28,356
chr10	87029732	.	CGT	C	685.08	PASS	AB=0.888;AC=24;AF=0.480;AN=50;BaseQRankSum=4.221;DP=482;FS=2.585;HRun=0;HaplotypeScore=80.9605;InbreedingCoeff=0.0793;MQ=58.90;MQ0=12;MQRankSum=0.649;QD=2.05;ReadPosRankSum=1.980;VQSLOD=1.7629;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:9.47:0,9,91	./.	./.	./.	0/0:9,0:8:3.01:0,3,44	0/1:25,5:30:8.17:8,0,248	0/1:14,1:15:20.21:20,0,120	0/0:29,0:28:2.94:0,3,18	0/0:7,0:7:3.01:0,3,44	1/1:16,10:25:20.89:195,21,0	1/1:13,2:16:14.26:118,14,0	0/1:19,0:19:21.14:21,0,125	0/0:4,0:4:6.02:0,6,85	0/0:23,1:24:4.47:0,4,248	1/1:12,0:13:3.01:32,3,0	0/1:2,3:6:26.52:27,0,38	1/1:14,8:23:20.47:207,20,0	1/1:27,0:34:8.18:38,8,0	1/1:13,0:16:8.52:41,9,0	0/1:10,0:15:0.13:0,0,0	0/1:27,0:27:3.28:3,0,58	0/0:5,0:4:6.02:0,6,87	0/1:10,0:9:20.15:20,0,107	0/1:36,1:36:27:27,0,402	0/1:17,0:17:6.66:7,0,169	0/1:11,0:16:14.72:15,0,32	0/0:8,0:12:2.97:0,3,20	1/1:7,1:9:8.69:60,9,0
chr10	87029827	.	TGA	T	7048.82	PASS	AB=0.994;AC=28;AF=0.500;AN=56;BaseQRankSum=19.239;DP=711;FS=2.102;HRun=0;HaplotypeScore=127.5456;InbreedingCoeff=-0.8571;MQ=84.11;MQ0=0;MQRankSum=-10.060;QD=10.14;ReadPosRankSum=2.185;VQSLOD=4.3024;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,28:34:81.26:1050,81,0	0/1:10,0:10:99:126,0,247	0/1:30,3:33:99:201,0,630	0/1:27,2:29:99:167,0,712	0/1:26,0:26:99:317,0,519	0/1:25,0:25:99:122,0,894	0/1:17,0:17:74.55:75,0,519	0/1:33,0:33:99:154,0,893	0/1:33,0:33:99:646,0,504	0/1:32,0:32:99:370,0,816	0/1:24,0:24:82.21:82,0,896	0/1:23,0:23:99:128,0,801	0/1:19,0:19:99:221,0,456	0/1:24,0:24:99:203,0,746	0/1:25,0:25:99:319,0,546	0/1:33,0:33:99:678,0,515	0/1:25,0:25:99:371,0,347	0/1:30,0:30:99:190,0,932	0/1:38,0:38:99:397,0,768	0/1:25,0:25:99:245,0,645	0/1:37,0:37:95.63:96,0,1325	0/1:8,0:8:53.78:54,0,282	0/1:20,0:20:99:185,0,462	0/1:19,0:19:99:221,0,459	0/1:29,0:29:99:236,0,720	0/1:23,0:23:98.46:98,0,703	0/1:21,0:21:95.39:95,0,731	0/0:16,0:16:42.14:0,42,712
chr10	87029835	.	AG	A	1871.15	PASS	AB=0.777;AC=24;AF=0.429;AN=56;BaseQRankSum=19.873;DP=720;FS=2.553;HRun=1;HaplotypeScore=131.8711;InbreedingCoeff=-0.7336;MQ=83.80;MQ0=0;MQRankSum=-11.178;QD=3.07;ReadPosRankSum=4.150;VQSLOD=0.3589;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,4:35:23.62:49,0,24	0/1:7,4:11:41.13:41,0,271	0/1:30,6:36:69.74:70,0,915	0/1:22,4:26:58.78:59,0,758	0/1:16,9:25:94.60:95,0,509	0/0:24,5:29:11.16:0,11,1041	0/1:13,3:16:11.28:11,0,509	0/1:29,6:35:27.08:27,0,1127	0/1:13,19:32:99:267,0,505	0/1:23,10:34:99:181,0,846	0/0:22,3:25:8.77:0,9,886	0/1:20,5:25:26.98:27,0,819	0/1:12,7:19:49.29:49,0,450	0/1:18,7:25:67.39:67,0,768	0/1:16,10:26:90.94:91,0,601	0/1:15,20:35:99:268,0,534	0/1:12,11:23:99:165,0,348	0/1:21,7:28:54.30:54,0,897	0/1:27,11:38:99:191,0,912	0/1:15,9:24:75.45:75,0,627	0/0:33,5:38:23.33:0,23,1359	0/1:8,2:10:9.23:9,0,264	0/1:12,6:18:59.23:59,0,467	0/1:12,7:19:83.44:83,0,464	0/1:19,8:27:59.44:59,0,751	0/1:19,4:23:23.70:24,0,766	0/1:16,4:20:3.61:4,0,696	0/0:18,0:18:51:0,51,743
chr10	87029837	.	AG	A	1880.82	PASS	AB=0.777;AC=24;AF=0.429;AN=56;BaseQRankSum=19.567;DP=723;FS=0.299;HRun=1;HaplotypeScore=131.1015;InbreedingCoeff=-0.7296;MQ=83.12;MQ0=0;MQRankSum=-9.399;QD=3.06;ReadPosRankSum=3.615;VQSLOD=0.0894;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,4:35:20.26:20,0,63	0/1:6,4:10:43.99:44,0,229	0/1:31,5:36:94.19:94,0,930	0/1:20,5:25:77.72:78,0,756	0/1:16,9:25:91.69:92,0,483	0/0:24,5:29:11.60:0,12,1053	0/1:13,3:16:11.32:11,0,506	0/1:32,6:38:41.83:42,0,1182	0/1:15,19:34:99:263,0,543	0/1:24,10:34:99:171,0,819	0/0:21,3:24:9.03:0,9,889	0/1:20,5:25:44.71:45,0,822	0/1:11,7:18:51:51,0,431	0/1:18,7:25:67.05:67,0,774	0/1:16,10:26:84.16:84,0,622	0/1:15,20:35:99:281,0,533	0/1:12,11:23:99:168,0,327	0/1:22,7:29:51.05:51,0,922	0/1:28,11:39:99:166,0,920	0/1:15,9:24:74.84:75,0,643	0/0:33,5:38:23.65:0,24,1360	0/1:9,2:11:7.84:8,0,266	0/1:13,6:19:55.91:56,0,506	0/1:12,7:19:83.08:83,0,466	0/1:18,8:26:62.02:62,0,688	0/1:19,4:23:20.62:21,0,817	0/1:16,4:20:3.07:3,0,698	0/0:17,0:17:50.90:0,51,741
chr10	87031347	.	GGGAGAGGCAGGCAT	G	965.20	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=5.109;DP=571;FS=3.865;HRun=0;HaplotypeScore=215.4168;InbreedingCoeff=0.6386;MQ=81.26;MQ0=0;MQRankSum=-5.226;QD=11.49;ReadPosRankSum=0.189;VQSLOD=2.5874;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,5:26:12:322,12,0	1/1:11,4:15:3.01:116,3,0	0/0:29,0:29:3.89:0,4,28	0/0:21,0:21:10.27:0,10,139	0/0:22,0:22:18.06:0,18,1077	0/0:16,0:16:3.01:0,3,200	0/0:19,0:19:12.04:0,12,489	0/0:30,0:29:3.01:0,3,85	0/0:25,0:25:24.07:0,24,1178	./.	1/1:8,2:10:6.02:202,6,0	0/0:24,0:24:30.10:0,30,1851	0/0:19,0:19:15.05:0,15,753	0/0:26,0:26:6.02:0,6,301	0/0:22,0:22:27.07:0,27,1252	0/0:12,0:12:6.02:0,6,398	1/1:16,6:22:6.02:233,6,0	1/1:8,3:11:6.02:233,6,0	0/0:23,0:23:9.03:0,9,509	0/0:18,0:18:12.04:0,12,653	0/0:31,0:31:24.08:0,24,1252	0/0:22,0:22:6.02:0,6,255	0/0:21,0:21:9.03:0,9,599	0/0:16,0:16:21.06:0,21,906	0/0:23,0:23:24.08:0,24,1245	0/0:19,0:19:9.03:0,9,508	0/0:18,0:18:15.05:0,15,884	0/0:8,0:8:15.04:0,15,384
chr10	87032555	.	A	AT	1073.82	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-0.808;DP=430;FS=11.674;HRun=7;HaplotypeScore=48.8253;InbreedingCoeff=0.9001;MQ=72.33;MQ0=10;MQRankSum=-3.725;QD=23.86;ReadPosRankSum=2.335;VQSLOD=3.1101;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.05:0,51,485	1/1:0,4:4:12.04:145,12,0	0/0:25,0:10:20.75:0,21,183	0/0:43,0:14:23.16:0,23,169	0/0:30,0:30:87.11:0,87,827	0/0:17,0:17:48.08:0,48,463	0/0:10,0:10:18.01:0,18,170	0/0:45,0:45:94.66:0,95,893	0/0:9,0:9:24.04:0,24,232	1/1:2,12:14:36.11:434,36,0	1/1:1,7:8:21.06:253,21,0	0/0:6,0:6:12:0,12,110	0/0:11,0:11:30.05:0,30,288	0/0:11,0:11:30.05:0,30,289	0/0:10,0:10:17.36:0,17,172	0/0:7,0:7:21.03:0,21,199	1/1:8,11:18:33.10:398,33,0	0/0:9,0:9:27.04:0,27,260	0/0:15,0:15:33.03:0,33,313	0/0:15,0:15:39.06:0,39,376	0/0:5,0:5:9.01:0,9,83	0/0:5,0:5:12.02:0,12,116	0/0:8,0:8:14.99:0,15,136	0/0:1,0:1:3:0,3,29	0/0:26,0:26:63.10:0,63,608	0/0:20,0:20:51.08:0,51,492	0/0:19,0:18:51.08:0,51,492	0/0:12,0:12:27.04:0,27,260
chr10	87034819	.	G	GT	3010.63	PASS	AB=0.839;AC=24;AF=0.429;AN=56;BaseQRankSum=-4.694;DP=527;FS=3.106;HRun=13;HaplotypeScore=63.6544;InbreedingCoeff=0.4751;MQ=68.98;MQ0=2;MQRankSum=-0.086;QD=10.28;ReadPosRankSum=-2.082;VQSLOD=2.6187;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:42.56:0,43,274	1/1:4,2:6:11.61:94,12,0	0/0:29,0:13:5.83:0,6,41	0/0:17,0:10:4:0,4,24	0/1:15,2:17:2.52:3,0,221	0/0:21,3:24:25.65:0,26,322	0/1:6,1:8:4.99:5,0,105	1/1:12,17:29:30.55:396,31,0	0/0:16,0:16:41.61:0,42,288	1/1:12,17:29:25.61:358,26,0	1/1:6,15:22:27.49:344,27,0	0/0:15,0:15:8.25:0,8,181	0/0:14,0:14:14.96:0,15,169	0/1:14,2:17:18.06:18,0,169	0/0:11,3:15:0.94:0,1,142	0/0:19,0:19:40.62:0,41,273	0/1:11,14:26:7.70:387,0,8	0/1:9,0:9:3.51:58,0,4	1/1:14,6:21:31.11:265,31,0	1/1:6,17:24:47.82:416,48,0	0/1:5,3:8:8.49:72,0,8	0/1:9,0:10:2.46:2,0,89	0/0:22,0:22:44.35:0,44,302	0/0:12,0:12:17.47:0,17,113	0/0:26,0:26:67.02:0,67,453	0/1:15,15:31:0.02:400,0,0	1/1:7,17:24:18.46:314,18,0	1/1:7,4:12:8.85:70,9,0
chr10	87038333	.	T	TCA	1046.31	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.727;DP=667;FS=19.652;HRun=0;HaplotypeScore=83.2964;InbreedingCoeff=0.9777;MQ=75.11;MQ0=0;MQRankSum=-3.633;QD=33.75;ReadPosRankSum=0.476;VQSLOD=4.0257;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,26:31:72.23:1141,72,0	0/0:8,0:8:21.07:0,21,260	0/0:32,0:28:41.92:0,42,471	0/0:28,0:25:28.48:0,28,382	0/0:20,0:20:51.15:0,51,620	0/0:22,0:22:51.16:0,51,632	0/0:21,0:21:54.15:0,54,655	0/0:31,0:31:66.20:0,66,809	0/0:22,0:22:54.17:0,54,669	0/0:33,0:33:81.25:0,81,1004	0/0:24,0:24:60.16:0,60,719	0/0:22,0:22:39.55:0,40,538	0/0:14,0:14:36.11:0,36,446	0/0:27,0:27:75.22:0,75,917	0/0:31,0:32:81.08:0,81,981	0/0:22,0:22:60.19:0,60,739	0/0:24,0:24:59.87:0,60,742	0/0:12,0:12:24.08:0,24,298	0/0:20,0:20:54.11:0,54,618	0/0:31,0:31:78.23:0,78,951	0/0:30,0:30:63.20:0,63,781	0/0:18,0:18:51.15:0,51,620	0/0:21,0:21:45.14:0,45,558	0/0:31,0:31:75.24:0,75,930	0/0:21,0:21:57.18:0,57,706	0/0:37,0:37:87.27:0,87,1078	0/0:27,0:27:69.22:0,69,854	0/0:6,0:6:15.05:0,15,185
chr10	87039206	.	AAAG	A	3399.06	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.207;DP=701;FS=0.000;HRun=0;HaplotypeScore=97.7633;InbreedingCoeff=0.9944;MQ=81.61;MQ0=0;MQRankSum=-2.093;QD=39.07;ReadPosRankSum=1.073;VQSLOD=4.3322;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.25:0,78,1678	1/1:1,12:13:23.99:308,24,0	0/0:25,0:25:69.23:0,69,1338	0/0:19,0:19:51.54:0,52,961	0/0:34,0:34:99:0,99,2112	0/0:31,0:31:81.26:0,81,1726	0/0:20,0:20:60.21:0,60,1324	0/0:36,0:36:99:0,105,2251	0/0:19,0:19:51.18:0,51,1126	1/1:1,26:27:78.27:1251,78,0	1/1:0,22:22:63.17:972,63,0	0/0:19,0:19:51.17:0,51,1103	0/0:24,0:24:72.25:0,72,1568	0/0:26,0:26:72.25:0,72,1590	0/0:26,0:26:69.22:0,69,1482	0/0:39,0:39:99:0,108,2385	1/1:1,24:25:54.18:868,54,0	0/0:9,0:9:24.08:0,24,530	0/0:23,0:23:57.18:0,57,1181	0/0:38,0:38:99:0,108,2364	0/0:35,0:35:90.29:0,90,1944	0/0:28,0:28:78.27:0,78,1715	0/0:31,0:31:75.26:0,75,1656	0/0:16,0:16:42.14:0,42,927	0/0:22,0:22:60.21:0,60,1306	0/0:35,0:35:90.31:0,90,1969	0/0:25,0:25:66.21:0,66,1392	0/0:5,0:5:15.05:0,15,331
chr10	87043261	.	C	CT	439.21	PASS	AB=0.899;AC=7;AF=0.125;AN=56;BaseQRankSum=-1.151;DP=566;FS=1.383;HRun=12;HaplotypeScore=75.9716;InbreedingCoeff=0.1404;MQ=76.95;MQ0=4;MQRankSum=0.873;QD=4.18;ReadPosRankSum=-0.055;VQSLOD=1.1461;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:34:46.35:0,46,482	0/0:10,0:10:17.88:0,18,131	0/0:22,0:18:5.55:0,6,76	0/0:27,0:24:5.22:0,5,63	0/0:13,1:15:2.69:0,3,173	0/0:17,0:17:23.28:0,23,174	0/0:21,0:23:48.73:0,49,338	0/0:18,3:21:11.61:0,12,217	0/0:12,0:13:29.82:0,30,219	0/1:25,1:27:1.77:2,0,281	0/0:7,0:7:14.87:0,15,108	0/0:25,0:25:50.55:0,51,368	0/1:13,1:15:9.10:9,0,110	0/0:13,0:14:17.09:0,17,128	0/0:17,1:19:5.59:0,6,195	0/0:18,0:18:41.67:0,42,306	0/0:33,1:34:63.27:0,63,627	1/1:5,22:27:35.18:503,35,0	0/0:14,1:15:3.60:0,4,190	0/1:15,3:19:26.32:26,0,164	0/0:23,2:24:15.47:0,15,277	0/0:22,0:22:47.63:0,48,348	0/1:11,1:13:0.33:0,0,152	0/0:29,0:28:71.52:0,72,525	0/0:23,0:23:38.69:0,39,285	0/0:20,1:22:11.57:0,12,239	0/0:22,1:22:6.48:0,6,206	0/1:3,1:4:17.26:17,0,51
chr10	87046860	.	C	CT	1409.57	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=2.629;DP=603;FS=0.540;HRun=10;HaplotypeScore=100.5777;InbreedingCoeff=0.9557;MQ=73.48;MQ0=1;MQRankSum=-3.600;QD=20.14;ReadPosRankSum=-1.157;VQSLOD=3.2866;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:66.62:0,67,525	1/1:4,6:10:15.51:161,16,0	0/0:28,0:21:41.27:0,41,321	0/0:26,0:18:28.10:0,28,267	0/0:15,0:15:29.91:0,30,241	0/0:20,0:20:44.85:0,45,362	0/0:20,0:20:47.90:0,48,390	0/0:30,0:29:50.88:0,51,419	0/0:18,0:18:41.88:0,42,338	1/1:5,18:23:51.11:536,51,0	1/1:3,14:17:39.10:415,39,0	0/0:30,0:30:68.80:0,69,555	0/0:21,0:21:50.91:0,51,419	0/0:15,0:15:35.91:0,36,290	0/0:24,0:24:47.88:0,48,391	0/0:25,0:25:56.02:0,56,462	1/1:3,17:20:4.81:449,5,0	0/0:16,0:16:41.94:0,42,345	0/0:23,1:23:44.89:0,45,367	0/0:22,0:22:47.91:0,48,394	0/0:20,0:20:44.82:0,45,361	0/0:14,0:14:38.95:0,39,320	0/0:27,0:27:71.88:0,72,589	0/0:20,0:21:55.93:0,56,445	0/0:19,0:19:38.93:0,39,320	0/0:27,0:27:62.84:0,63,511	0/0:19,0:19:17.95:0,18,147	0/0:15,0:15:33.39:0,33,312
chr10	87046876	.	TTG	T	3013.90	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=8.348;DP=633;FS=15.141;HRun=0;HaplotypeScore=114.0877;InbreedingCoeff=0.8039;MQ=64.09;MQ0=6;MQRankSum=-2.620;QD=14.28;ReadPosRankSum=-0.298;VQSLOD=2.5503;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:30.35:0,30,402	0/0:13,0:13:3.33:0,3,52	0/1:29,0:16:7.82:8,0,242	0/0:28,0:16:20.85:0,21,194	0/0:17,0:17:41.16:0,41,520	0/0:16,0:16:36.12:0,36,571	0/0:22,0:22:21.80:0,22,614	1/1:8,22:30:62.93:712,63,0	0/0:17,0:17:38.57:0,39,532	0/0:30,0:29:14.63:0,15,213	0/1:19,0:19:0.40:0,0,27	0/0:27,0:27:58.98:0,59,820	0/0:25,1:26:31.93:0,32,919	0/0:12,0:12:30.10:0,30,452	0/0:26,0:26:59.99:0,60,891	0/0:26,0:26:20.47:0,20,780	0/0:26,0:26:7.87:0,8,81	0/0:18,0:18:5.22:0,5,355	1/1:10,13:21:38.45:375,38,0	1/1:13,8:21:31.61:308,32,0	1/1:14,9:23:42.08:474,42,0	0/0:14,0:14:12.93:0,13,194	0/0:31,0:31:49.59:0,50,885	0/0:24,0:24:56.68:0,57,812	0/0:20,0:20:42.15:0,42,588	1/1:14,15:28:11.19:500,11,0	1/1:12,9:21:32.77:331,33,0	1/1:11,5:16:42.13:499,42,0
chr10	87046889	.	TGTGC	T	3627.63	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=10.949;DP=632;FS=17.751;HRun=0;HaplotypeScore=131.7240;InbreedingCoeff=0.4034;MQ=55.98;MQ0=7;MQRankSum=-4.869;QD=11.34;ReadPosRankSum=-2.082;VQSLOD=1.6615;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:36:85.68:86,0,176	0/1:11,0:11:35.90:36,0,53	0/1:28,0:10:18.44:18,0,135	0/1:23,0:10:2.52:3,0,15	0/0:20,0:20:48.79:0,49,698	0/0:21,0:21:11.11:0,11,730	0/0:25,0:25:55.90:0,56,756	1/1:33,0:33:62.54:481,63,0	0/0:16,0:16:44.93:0,45,734	0/1:24,0:23:99:159,0,211	0/1:17,0:17:31.69:84,0,32	0/0:26,0:26:59.96:0,60,958	0/0:30,0:30:36.18:0,36,1094	0/0:15,0:15:25:0,25,626	0/0:29,0:29:77.67:0,78,1138	0/0:29,0:29:49.86:0,50,999	0/1:21,0:21:21.36:132,0,21	0/0:17,0:16:10.16:0,10,464	1/1:18,0:17:32.70:287,33,0	1/1:8,9:17:32.74:422,33,0	1/1:27,0:26:41.50:501,41,0	0/0:9,0:9:17.96:0,18,307	0/0:27,0:27:55.81:0,56,1042	0/0:26,0:26:63.02:0,63,1198	0/0:22,0:22:59.95:0,60,821	0/1:27,0:26:8.46:495,0,8	1/1:9,14:23:25.65:515,26,0	1/1:15,0:15:40.94:409,41,0
chr10	87046891	.	TGC	T	2517.78	PASS	AB=0.973;AC=24;AF=0.429;AN=56;BaseQRankSum=13.443;DP=633;FS=32.136;HRun=0;HaplotypeScore=115.3332;InbreedingCoeff=0.4653;MQ=55.90;MQ0=7;MQRankSum=-3.983;QD=6.96;ReadPosRankSum=-0.666;VQSLOD=1.2336;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:36:92.31:174,0,92	0/1:12,0:12:3.25:63,0,3	0/1:27,0:10:18.44:18,0,135	0/1:21,0:9:2.52:3,0,15	0/0:20,0:20:22.91:0,23,464	0/0:21,0:21:10.98:0,11,538	0/0:22,4:26:16.66:0,17,597	1/1:34,0:34:66.31:436,66,0	0/0:16,0:16:29.95:0,30,473	0/1:24,2:25:11.05:275,0,11	0/1:15,2:17:5.58:106,0,6	0/0:26,0:26:28.31:0,28,620	0/0:29,0:29:30.57:0,31,758	0/0:15,0:15:25:0,25,484	0/0:30,0:30:66.98:0,67,858	0/0:29,0:29:42.07:0,42,725	1/1:19,2:21:10.81:145,11,0	0/1:17,0:16:18.98:19,0,275	1/1:17,0:16:40.71:257,41,0	1/1:17,0:17:32.09:192,32,0	1/1:27,0:26:40.24:240,40,0	0/0:7,3:10:4.77:0,5,214	0/1:26,1:27:10.44:10,0,658	0/0:27,0:27:41.97:0,42,800	0/0:22,0:22:16.24:0,16,499	1/1:25,0:24:48.46:337,48,0	1/1:23,0:23:26.22:210,26,0	1/1:15,0:15:40.49:232,40,0
chr10	87046893	.	CGT	C	1735.24	PASS	AB=0.895;AC=21;AF=0.389;AN=54;BaseQRankSum=7.311;DP=631;FS=1.031;HRun=0;HaplotypeScore=117.7032;InbreedingCoeff=0.2024;MQ=55.50;MQ0=7;MQRankSum=-1.536;QD=5.26;ReadPosRankSum=1.543;VQSLOD=2.6925;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:9.17:0,9,62	0/0:12,0:12:1.17:0,1,51	./.	0/0:24,0:9:3:0,3,25	0/1:17,3:20:33.20:33,0,392	0/1:20,0:20:23.58:24,0,431	0/0:26,0:26:16.78:0,17,508	1/1:27,5:32:24.68:268,25,0	0/0:16,2:18:4.45:0,4,457	0/0:26,0:25:23.05:0,23,218	0/0:17,0:17:2.99:0,3,24	0/1:21,5:26:36.22:36,0,385	0/0:27,0:28:32.31:0,32,588	0/1:15,0:15:3.67:4,0,384	0/0:31,0:31:19.54:0,20,690	0/0:25,4:29:7.48:0,7,522	0/0:19,0:19:6.86:0,7,62	0/1:15,2:16:41.07:41,0,232	1/1:16,2:17:13.68:118,14,0	1/1:9,7:17:23.85:243,24,0	1/1:14,12:25:26.64:271,27,0	0/0:10,0:10:15.05:0,15,221	0/1:25,2:27:60.23:60,0,419	0/1:23,4:27:18.10:18,0,615	0/1:18,4:22:64.78:65,0,397	0/1:19,5:24:8.40:302,0,8	1/1:16,6:23:29.48:258,29,0	1/1:9,5:15:17.78:173,18,0
chr10	87047027	.	A	ACCTAGAG	6104.66	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-6.232;DP=730;FS=7.122;HRun=0;HaplotypeScore=162.2309;InbreedingCoeff=0.9986;MQ=61.63;MQ0=1;MQRankSum=-11.031;QD=92.49;ReadPosRankSum=-0.765;VQSLOD=5.4983;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,2890	1/1:0,8:9:21.07:856,21,0	0/0:25,0:22:66.21:0,66,1613	0/0:30,0:26:69.07:0,69,1568	0/0:32,0:32:96.30:0,96,2475	0/0:18,0:18:54.18:0,54,1390	0/0:24,0:24:72.22:0,72,1748	0/0:29,0:29:87.30:0,87,2303	0/0:21,0:21:60.17:0,60,1473	1/1:1,18:22:66.17:2439,66,0	1/1:4,13:19:39.13:1588,39,0	0/0:29,0:29:81.28:0,81,2176	0/0:27,0:27:81.24:0,81,2069	0/0:25,0:25:69.17:0,69,1764	0/0:32,0:32:93.31:0,93,2452	0/0:30,0:30:84.28:0,84,2194	1/1:2,10:16:30.10:1222,30,0	0/0:27,0:27:81.28:0,81,2110	0/0:15,0:14:39.13:0,39,1000	0/0:36,0:36:99:0,108,2678	0/0:42,0:42:99:0,123,3119	0/0:24,0:24:69.19:0,69,1745	0/0:23,0:23:66.23:0,66,1767	0/0:41,0:41:99:0,114,2990	0/0:23,0:23:69.24:0,69,1859	0/0:29,0:29:84.27:0,84,2122	0/0:29,0:28:87.26:0,87,2242	0/0:11,0:11:33.11:0,33,889
chr10	87049331	.	TA	T	1694.92	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.433;DP=668;FS=5.193;HRun=7;HaplotypeScore=66.0105;InbreedingCoeff=0.9410;MQ=84.69;MQ0=0;MQRankSum=-0.426;QD=25.30;ReadPosRankSum=1.884;VQSLOD=4.4632;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.16:0,57,701	1/1:0,8:8:24.05:245,24,0	0/0:22,0:22:46.51:0,47,591	0/0:19,1:20:42.09:0,42,483	0/0:20,0:20:57.18:0,57,717	0/0:35,0:35:96.31:0,96,1208	0/0:15,0:15:42.13:0,42,528	0/0:32,0:32:75.23:0,75,933	0/0:37,0:37:99:0,105,1293	1/1:1,19:20:57.10:569,57,0	1/1:1,16:17:48.11:490,48,0	0/0:23,0:23:66.21:0,66,827	0/0:20,0:20:57.16:0,57,700	0/0:26,0:26:78.24:0,78,964	0/0:27,0:27:78.24:0,78,969	0/0:37,0:37:99:0,102,1270	1/1:1,21:22:54.12:551,54,0	0/0:20,0:20:54.17:0,54,678	0/0:24,1:25:32.59:0,33,724	0/0:23,0:23:63.20:0,63,793	0/0:35,0:35:87.28:0,87,1093	0/0:24,0:24:63.19:0,63,778	0/0:16,0:16:42.13:0,42,527	0/0:22,0:22:60.19:0,60,755	0/0:20,0:20:54.15:0,54,656	0/0:31,3:34:1.46:0,1,964	0/0:36,0:34:99:0,102,1251	0/0:13,0:13:39.12:0,39,491
chr10	87050866	.	GTTTTGTT	G	2308.37	PASS	AB=0.933;AC=9;AF=0.161;AN=56;BaseQRankSum=5.454;DP=554;FS=1.411;HRun=0;HaplotypeScore=166.1993;InbreedingCoeff=0.8335;MQ=63.47;MQ0=13;MQRankSum=-9.097;QD=26.84;ReadPosRankSum=1.306;VQSLOD=2.9873;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:46.92:0,47,1415	1/1:3,7:10:12.04:268,12,0	0/0:55,0:31:7.37:0,7,195	0/0:55,0:18:13.40:0,13,285	0/0:19,0:19:41.28:0,41,1211	0/0:19,0:19:51.18:0,51,1851	0/0:14,0:14:30.10:0,30,1044	0/0:22,0:22:30.09:0,30,796	0/0:13,0:13:33.09:0,33,1093	1/1:9,14:23:45.15:1016,45,0	1/1:7,12:19:27.09:614,27,0	0/0:15,0:15:45.15:0,45,1553	0/0:14,0:14:39.13:0,39,1401	0/0:14,0:14:30.10:0,30,1024	0/0:15,0:15:36.08:0,36,1191	0/0:23,0:23:60.21:0,60,2074	1/1:10,10:19:24.08:538,24,0	0/0:16,0:16:33.11:0,33,1138	0/0:18,0:17:27.09:0,27,728	0/0:31,0:31:72.23:0,72,2454	0/0:11,0:10:27.09:0,27,796	0/0:13,0:13:30.10:0,30,1069	0/0:16,0:16:42.14:0,42,1460	0/0:14,0:14:39.09:0,39,1158	0/0:15,0:15:30.09:0,30,1015	0/1:13,1:14:35.08:35,0,1067	0/0:18,0:18:42.14:0,42,1395	0/0:19,0:19:36.12:0,36,1188
chr10	87051458	.	GT	G	2262.51	PASS	AB=0.955;AC=22;AF=0.393;AN=56;BaseQRankSum=2.184;DP=654;FS=18.853;HRun=12;HaplotypeScore=98.8636;InbreedingCoeff=0.4342;MQ=63.19;MQ0=12;MQRankSum=7.002;QD=6.67;ReadPosRankSum=-0.390;VQSLOD=0.5683;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:30:22.08:0,22,99	0/1:9,0:9:28.62:29,0,46	0/1:22,2:11:0.16:0,0,93	0/1:27,0:13:10.97:11,0,78	0/0:21,1:22:30.84:0,31,477	0/0:14,0:16:44.74:0,45,414	0/0:25,0:24:60.10:0,60,602	1/1:8,11:19:16.47:234,16,0	0/0:25,1:25:33.84:0,34,507	0/1:36,0:35:43.62:352,0,44	0/1:20,0:19:60.68:63,0,61	0/0:25,0:27:69.05:0,69,614	0/1:11,2:13:16.47:16,0,194	0/1:22,3:28:2.19:2,0,527	0/0:23,0:23:54.08:0,54,539	0/0:29,1:28:9.45:0,9,612	0/1:35,0:33:13.77:14,0,88	0/0:10,0:11:9.36:0,9,52	1/1:10,20:28:56.71:435,57,0	1/1:3,19:23:26.26:379,26,0	1/1:4,15:19:31.42:256,31,0	0/0:27,0:27:63.99:0,64,632	0/0:16,0:19:50.61:0,51,469	0/0:28,1:30:36.61:0,37,519	0/0:24,1:25:16.13:0,16,502	1/1:7,20:27:21.22:399,21,0	1/1:8,15:22:29.47:232,29,0	1/1:2,0:4:7.06:35,7,0
chr10	87051466	.	T	TTTTGTTTTG	7794.57	PASS	AB=0.939;AC=19;AF=0.339;AN=56;BaseQRankSum=-2.607;DP=684;FS=15.873;HRun=0;HaplotypeScore=178.2800;InbreedingCoeff=0.2868;MQ=60.33;MQ0=27;MQRankSum=-2.085;QD=22.02;ReadPosRankSum=-1.553;VQSLOD=3.0339;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:28:7.52:784,8,0	0/1:1,8:11:3.37:777,0,3	0/1:26,0:10:4.71:5,0,93	0/1:30,0:11:16.09:16,0,74	0/0:24,0:22:54.15:0,54,1134	0/0:20,0:20:57.02:0,57,1079	0/0:26,0:25:72.16:0,72,1531	0/1:19,0:18:99:137,0,189	0/0:26,0:24:39.92:0,40,1111	1/1:3,25:36:90.02:1979,90,0	1/1:4,14:17:39.05:1314,39,0	0/0:27,0:27:74.57:0,75,1139	0/0:12,0:12:30.01:0,30,646	0/0:27,0:27:77.58:0,78,1447	0/0:25,0:23:63.18:0,63,1333	0/0:32,0:30:41.67:0,42,1410	1/1:8,22:34:24.51:1562,25,0	1/1:5,0:13:19.46:528,19,0	0/1:29,0:26:99:221,0,499	0/1:30,0:29:88.53:89,0,733	0/1:19,0:18:89.41:89,0,281	0/0:26,0:26:67.05:0,67,1510	0/0:18,0:18:54.16:0,54,1124	0/0:29,0:29:68.95:0,69,1373	0/0:28,0:27:41.83:0,42,1216	0/1:25,1:26:99:209,0,752	0/1:23,0:22:84.05:84,0,304	0/0:10,0:10:0.84:0,1,288
chr10	87052459	.	A	ATGTCTG	1233.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.537;DP=647;FS=9.967;HRun=0;HaplotypeScore=139.0320;InbreedingCoeff=0.9585;MQ=68.54;MQ0=0;MQRankSum=-5.778;QD=24.67;ReadPosRankSum=-1.222;VQSLOD=2.5676;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,19:50:42.14:1328,42,0	0/0:8,0:8:24.08:0,24,494	0/0:32,0:31:24.08:0,24,468	0/0:25,0:22:23.48:0,23,388	0/0:32,0:31:33.11:0,33,637	0/0:17,0:17:27.09:0,27,533	0/0:22,0:22:33.11:0,33,670	0/0:39,0:39:45.14:0,45,812	0/0:19,0:19:39.13:0,39,802	0/0:21,0:21:30.09:0,30,567	0/0:24,0:24:36.09:0,36,655	0/0:20,0:20:48.16:0,48,992	0/0:23,0:23:47.83:0,48,950	0/0:19,0:19:51.16:0,51,1016	0/0:13,0:13:33.11:0,33,682	0/0:19,0:19:51.17:0,51,1042	0/0:34,0:34:81.28:0,81,1632	0/0:15,0:15:30.10:0,30,620	0/0:20,0:20:22.64:0,23,442	0/0:22,0:22:36.10:0,36,658	0/0:36,0:36:69.24:0,69,1403	0/0:16,0:16:36.12:0,36,723	0/0:18,0:18:36.11:0,36,642	0/0:23,0:23:51.18:0,51,1054	0/0:20,0:20:42.10:0,42,783	0/0:24,0:24:42.14:0,42,826	0/0:29,0:29:51.17:0,51,1054	0/0:7,0:7:12.04:0,12,248
chr10	87053045	.	ATCCTTCCTTCCTTCCATCCT	A	5233.52	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.427;DP=710;FS=0.000;HRun=0;HaplotypeScore=371.5409;InbreedingCoeff=0.9870;MQ=63.29;MQ0=0;MQRankSum=-3.210;QD=61.57;ReadPosRankSum=0.046;VQSLOD=3.3455;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,104,6804	1/1:2,9:11:18.06:969,18,0	0/0:12,0:12:24.07:0,24,436	0/0:14,0:12:27.01:0,27,676	0/0:36,0:36:84.22:0,84,5795	0/0:33,0:33:87.25:0,87,5406	0/0:20,0:20:51.13:0,51,2742	0/0:22,0:22:36.07:0,36,823	0/0:32,0:32:90.26:0,90,6987	1/1:4,29:33:75.08:2220,75,0	1/1:4,20:24:44.87:1470,45,0	0/0:22,0:22:57.17:0,57,3988	0/0:25,0:25:60.19:0,60,4667	0/0:23,0:23:60.16:0,60,4418	0/0:33,0:33:78.19:0,78,4610	0/0:26,0:26:66.17:0,66,4873	1/1:5,12:16:12.04:574,12,0	0/0:20,0:20:54.14:0,54,2848	0/0:24,0:23:57.13:0,57,2993	0/0:26,0:26:54.10:0,54,3239	0/0:27,0:27:55.53:0,56,3625	0/0:25,0:25:63.04:0,63,4308	0/0:32,0:32:78.18:0,78,5785	0/0:28,0:28:62.75:0,63,5544	0/0:17,0:17:42.13:0,42,3461	0/0:37,0:37:90.28:0,90,5167	0/0:33,0:33:60.17:0,60,4198	0/0:8,0:8:21.05:0,21,1267
chr10	87053061	.	A	ATCCT	5183.32	PASS	AB=1.000;AC=16;AF=0.296;AN=54;BaseQRankSum=-9.343;DP=740;FS=6.212;HRun=0;HaplotypeScore=148.0252;InbreedingCoeff=0.8202;MQ=58.03;MQ0=2;MQRankSum=1.157;QD=21.07;ReadPosRankSum=-2.175;VQSLOD=3.5668;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:72.10:0,72,1050	0/0:9,0:9:14.50:0,15,116	0/0:13,0:9:5.97:0,6,45	./.	0/0:35,0:35:75.21:0,75,1102	0/0:34,0:34:54.05:0,54,733	0/0:21,0:21:25.33:0,25,446	1/1:34,0:34:47.43:575,47,0	0/0:33,0:33:78.26:0,78,1201	0/0:29,0:29:19.43:0,19,217	0/0:20,0:20:14.56:0,15,136	0/0:27,0:27:54.17:0,54,823	0/0:23,0:23:54.17:0,54,822	0/0:22,0:22:57.15:0,57,809	0/0:35,0:35:69.21:0,69,1029	0/0:31,0:31:63.21:0,63,969	0/1:14,0:13:6.39:6,0,49	0/1:6,0:26:5.96:6,0,270	1/1:13,10:24:39.05:727,39,0	1/1:9,14:25:39.05:791,39,0	1/1:13,28:42:27.09:644,27,0	0/0:22,0:22:45.15:0,45,712	0/0:30,0:29:69.19:0,69,1037	0/0:31,0:31:63.09:0,63,908	0/0:23,0:23:53.88:0,54,843	1/1:16,20:38:66.16:1218,66,0	1/1:8,23:33:42.13:1002,42,0	1/1:4,5:9:9.03:215,9,0
chr10	87054066	.	T	TAG	234.76	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.682;DP=510;FS=3.899;HRun=0;HaplotypeScore=77.5564;InbreedingCoeff=0.8738;MQ=64.59;MQ0=11;MQRankSum=-1.223;QD=19.56;ReadPosRankSum=-1.971;VQSLOD=2.9536;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:33.85:0,34,419	0/0:9,0:9:12.24:0,12,80	0/0:20,0:9:24.05:0,24,248	0/0:25,0:12:19.18:0,19,220	0/0:20,0:20:45:0,45,479	0/0:21,0:21:29.82:0,30,371	0/0:16,0:16:33.03:0,33,354	0/0:31,0:31:77.98:0,78,699	0/0:18,0:17:44.90:0,45,452	0/0:20,0:20:34.64:0,35,405	0/0:16,0:16:27.27:0,27,204	0/0:13,0:12:27.01:0,27,280	0/0:11,0:11:29.95:0,30,299	0/0:13,0:13:13.41:0,13,281	0/0:20,0:20:56.96:0,57,599	0/0:10,0:10:30:0,30,322	0/0:22,0:22:29.67:0,30,292	1/1:8,4:12:9.68:319,10,0	0/0:29,0:29:80.93:0,81,705	0/0:17,0:18:38.92:0,39,321	0/0:22,0:22:50.56:0,51,427	0/0:18,0:18:38.91:0,39,335	0/0:12,0:12:17.51:0,18,227	0/0:13,0:13:27.02:0,27,300	0/0:16,0:16:41.97:0,42,354	0/0:35,0:35:98.89:0,99,859	0/0:20,0:19:53.59:0,54,467	0/0:7,0:7:20.98:0,21,176
chr10	87054067	.	AGT	A	551.49	PASS	AB=0.909;AC=16;AF=0.308;AN=52;BaseQRankSum=2.636;DP=530;FS=6.786;HRun=0;HaplotypeScore=70.6166;InbreedingCoeff=-0.0468;MQ=63.93;MQ0=11;MQRankSum=0.628;QD=2.24;ReadPosRankSum=1.178;VQSLOD=0.9322;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:7.19:7,0,134	0/0:11,0:11:14.89:0,15,117	0/0:20,0:9:0.47:0,0,1	./.	0/0:20,0:20:24.07:0,24,315	0/0:19,0:21:6.10:0,6,175	0/1:16,1:17:41.39:41,0,241	1/1:32,0:32:2.92:32,3,0	0/1:17,2:18:2.43:2,0,293	0/0:17,0:20:14.23:0,14,126	0/0:17,0:17:8.53:0,9,56	0/0:13,0:12:12.03:0,12,152	0/1:10,1:11:20.70:21,0,122	0/0:12,0:13:12.03:0,12,139	0/0:20,0:20:1.23:0,1,325	0/1:11,0:11:17.50:18,0,164	0/0:24,0:25:17.50:0,18,149	0/0:14,0:14:1.54:0,2,200	1/1:26,2:28:9:87,9,0	0/1:16,2:18:37.06:53,0,37	0/1:22,1:23:46.90:47,0,123	0/1:17,2:19:37.46:37,0,73	0/0:12,0:13:0.56:0,1,101	0/1:13,3:16:5.69:6,0,277	0/0:16,0:16:3.01:0,3,38	./.	0/1:12,7:19:14.34:246,0,14	1/1:4,3:7:9.02:98,9,0
chr10	87054684	.	C	CTT	1098.46	PASS	AB=0.918;AC=21;AF=0.375;AN=56;BaseQRankSum=2.793;DP=524;FS=5.009;HRun=16;HaplotypeScore=101.8049;InbreedingCoeff=0.1665;MQ=57.80;MQ0=8;MQRankSum=1.104;QD=3.37;ReadPosRankSum=-2.416;VQSLOD=-0.4353;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,1:33:4.04:104,0,4	1/1:9,2:14:20.42:216,20,0	0/1:17,0:8:3.72:4,0,26	0/1:11,0:6:19.75:20,0,24	0/1:24,0:24:13.52:14,0,126	0/0:16,0:17:21.69:0,22,126	0/0:13,0:14:20:0,20,129	0/1:38,0:41:22.94:23,0,162	0/0:18,0:19:12.12:0,12,107	1/1:12,13:28:35.37:294,35,0	1/1:14,13:30:20.02:316,20,0	0/0:13,0:12:25.80:0,26,165	0/0:18,0:18:17.49:0,17,96	0/1:10,0:11:21.77:22,0,68	0/0:18,0:18:4.54:0,5,79	0/0:15,0:14:3.59:0,4,104	1/1:4,6:11:14.35:129,14,0	1/1:9,0:17:4:76,4,0	0/0:19,0:19:16.78:0,17,156	0/1:22,0:23:11.18:11,0,168	0/0:3,0:4:7.28:0,7,38	0/1:17,0:18:9.20:9,0,121	0/0:19,0:20:20.67:0,21,181	0/1:18,0:19:7.93:8,0,125	0/1:18,0:22:2.18:2,0,102	0/0:13,0:14:12.43:0,12,128	0/0:21,0:22:24.36:0,24,149	0/1:3,2:5:27.60:28,0,35
chr10	87056090	.	TCACACACACACACACACACA	T	1372.81	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.460;DP=679;FS=3.468;HRun=0;HaplotypeScore=296.9859;InbreedingCoeff=0.7761;MQ=51.28;MQ0=16;MQRankSum=-1.627;QD=14.76;ReadPosRankSum=-1.574;VQSLOD=2.0703;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:31:30.10:0,30,1840	1/1:8,8:16:6.02:320,6,0	0/0:25,0:7:3.01:0,3,58	0/0:26,0:4:3.01:0,3,46	0/0:16,0:16:24.08:0,24,1956	0/0:21,0:20:27.09:0,27,2054	0/0:19,0:21:32.12:0,32,1849	0/0:23,0:21:30.09:0,30,679	0/0:13,0:19:24.08:0,24,1128	1/1:22,14:36:36.11:822,36,0	1/1:10,8:17:6.02:285,6,0	0/0:22,0:25:39.13:0,39,2736	0/0:18,0:20:27.09:0,27,1862	0/0:20,0:19:30.09:0,30,1943	0/0:26,0:26:37.84:0,38,2402	0/0:10,0:12:24.07:0,24,1642	1/1:16,0:23:3.01:81,3,0	0/0:31,0:28:47.66:0,48,1085	0/0:16,0:20:20.66:0,21,1567	0/0:24,0:25:23.80:0,24,1235	0/0:47,0:46:53.27:0,53,2749	0/0:24,0:29:38.46:0,38,2753	0/0:24,0:24:33.10:0,33,2225	0/0:33,0:47:66.17:0,66,3240	0/0:20,0:22:42.14:0,42,2713	0/0:23,0:23:48.16:0,48,2175	0/0:12,0:23:24.55:0,25,1050	0/0:5,0:4:9.03:0,9,551
chr10	87056705	.	CCT	C	719.87	PASS	AB=0.909;AC=9;AF=0.161;AN=56;BaseQRankSum=6.873;DP=576;FS=15.292;HRun=0;HaplotypeScore=87.5997;InbreedingCoeff=0.7557;MQ=53.43;MQ0=36;MQRankSum=-3.045;QD=9.60;ReadPosRankSum=0.409;VQSLOD=1.9844;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:49.49:0,49,759	1/1:1,0:1:3.01:38,3,0	0/0:38,0:7:8.98:0,9,156	0/0:64,0:8:12.54:0,13,106	0/0:24,0:20:41.35:0,41,648	0/0:17,0:13:24.06:0,24,371	0/0:23,0:21:26.87:0,27,554	0/0:17,0:17:33.07:0,33,484	0/0:29,0:28:62.43:0,62,991	1/1:9,17:23:44.78:520,45,0	1/1:8,7:14:11.56:107,12,0	0/0:19,0:17:27.09:0,27,430	0/0:14,0:14:27.09:0,27,411	0/0:23,0:23:57.12:0,57,899	0/0:23,0:22:35.86:0,36,566	0/0:22,0:22:42.78:0,43,757	1/1:7,16:22:15:187,15,0	0/0:12,0:11:9.26:0,9,324	0/0:14,0:12:24.01:0,24,347	0/0:9,0:8:17.97:0,18,248	0/0:25,0:24:36.54:0,37,688	0/1:9,1:8:19.42:19,0,224	0/0:18,0:18:35.86:0,36,517	0/0:26,0:26:51.17:0,51,821	0/0:9,0:9:9.03:0,9,148	0/0:19,0:18:45.15:0,45,723	0/0:14,0:13:24.55:0,25,376	0/0:15,0:12:21.07:0,21,345
chr10	87057450	.	C	CT	1420.69	PASS	AB=0.875;AC=15;AF=0.268;AN=56;BaseQRankSum=-6.219;DP=540;FS=14.926;HRun=13;HaplotypeScore=76.4533;InbreedingCoeff=0.7655;MQ=62.51;MQ0=10;MQRankSum=3.414;QD=8.41;ReadPosRankSum=-2.630;VQSLOD=0.4416;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:20:26.19:0,26,169	0/0:1,0:3:6.11:0,6,18	0/0:31,0:12:5.12:0,5,80	0/0:27,1:15:15.50:0,16,116	0/0:18,0:23:43.45:0,43,268	0/0:15,0:15:25.99:0,26,184	0/0:14,0:14:33.90:0,34,228	1/1:17,13:29:7:202,7,0	0/0:17,1:19:15.80:0,16,245	0/0:4,0:18:26.08:0,26,77	0/0:1,0:12:22.13:0,22,64	0/0:16,0:16:26.48:0,26,183	0/0:19,0:19:37.57:0,38,252	0/0:12,0:12:29.74:0,30,205	0/0:19,2:21:10.66:0,11,216	0/0:18,1:19:13.69:0,14,239	0/0:2,0:18:28.62:0,29,102	0/1:18,3:20:17.09:17,0,187	1/1:9,16:25:30.69:382,31,0	1/1:9,15:23:26.78:221,27,0	1/1:4,10:14:24.03:223,24,0	0/0:17,0:18:31.63:0,32,210	0/0:19,0:21:46.45:0,46,308	0/0:16,1:18:2.26:0,2,158	0/0:21,0:22:43.59:0,44,293	1/1:7,13:23:6.76:292,7,0	1/1:7,19:27:10.04:218,10,0	1/1:3,1:4:5.97:48,6,0
chr10	87057894	.	CTT	C	1478.37	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-3.277;DP=407;FS=1.041;HRun=3;HaplotypeScore=61.7119;InbreedingCoeff=0.9126;MQ=65.00;MQ0=8;MQRankSum=0.255;QD=15.40;ReadPosRankSum=-0.687;VQSLOD=0.4482;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:58.67:0,59,507	0/0:8,0:8:20.87:0,21,185	0/0:15,0:9:17.98:0,18,163	0/0:26,0:12:13.53:0,14,189	0/0:19,0:18:46.23:0,46,397	0/0:14,0:14:38.98:0,39,341	0/0:29,0:29:80.63:0,81,687	1/1:16,0:16:33.85:290,34,0	0/0:12,0:12:27.07:0,27,212	0/0:21,0:21:51.30:0,51,448	0/0:10,0:10:3.13:0,3,183	0/0:16,0:16:39.53:0,40,311	0/0:17,0:17:45.86:0,46,413	0/0:12,0:12:32.11:0,32,269	0/0:8,0:8:17.61:0,18,148	0/0:11,0:11:30.02:0,30,273	0/0:17,0:16:36.52:0,37,289	1/1:8,0:8:20.55:160,21,0	1/1:16,0:16:31.86:285,32,0	1/1:1,4:5:2.96:19,3,0	1/1:22,0:22:44.72:361,45,0	0/0:17,0:17:38.96:0,39,341	0/0:6,0:6:15.71:0,16,116	0/0:16,0:15:35.87:0,36,294	0/0:11,0:11:29.98:0,30,264	1/1:15,0:15:38.98:341,39,0	1/1:3,0:3:5.99:50,6,0	1/1:11,0:8:20.95:169,21,0
chr10	87058043	.	TC	T	789.03	PASS	AB=0.867;AC=14;AF=0.250;AN=56;BaseQRankSum=1.937;DP=333;FS=4.282;HRun=10;HaplotypeScore=46.8608;InbreedingCoeff=0.3483;MQ=79.36;MQ0=0;MQRankSum=-0.050;QD=5.52;ReadPosRankSum=0.974;VQSLOD=0.5857;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:16,2:19:16.95:17,0,314	1/1:3,2:5:5.98:52,6,0	0/1:12,1:12:12:12,0,86	0/0:10,0:10:10.18:0,10,81	0/0:10,0:11:2.05:0,2,213	0/0:13,0:13:33.09:0,33,365	0/1:20,3:23:39.06:39,0,293	0/1:6,3:9:23.52:43,0,24	0/0:14,0:14:33.93:0,34,353	1/1:5,10:15:29.98:260,30,0	1/1:1,8:9:14.99:130,15,0	0/0:17,1:18:13.95:0,14,375	0/0:9,0:9:15.03:0,15,158	0/0:10,0:10:24.04:0,24,243	0/0:6,0:6:9.47:0,9,82	0/0:9,0:9:21.06:0,21,232	1/1:2,13:15:38.99:339,39,0	0/0:4,0:14:20.05:0,20,117	0/1:10,1:11:4.99:5,0,178	0/0:12,0:12:27.07:0,27,292	0/0:9,0:9:15.04:0,15,166	0/0:12,0:12:30.08:0,30,332	0/0:8,0:8:18.05:0,18,196	0/1:20,4:24:61.69:62,0,290	0/0:5,0:5:3:0,3,29	0/0:13,0:13:27.06:0,27,291	0/0:11,0:11:21.06:0,21,232	0/0:6,0:6:12.03:0,12,133
chr10	87058876	.	A	AATGT	2561.57	PASS	AB=0.859;AC=13;AF=0.260;AN=50;BaseQRankSum=-6.566;DP=785;FS=2.046;HRun=0;HaplotypeScore=147.1985;InbreedingCoeff=0.1706;MQ=66.61;MQ0=7;MQRankSum=1.097;QD=8.03;ReadPosRankSum=-3.062;VQSLOD=2.4903;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:34:9.01:0,9,83	0/1:7,0:7:37.59:38,0,38	./.	./.	0/1:25,1:36:0.02:0,0,0	0/0:31,0:31:42.09:0,42,548	0/0:35,0:35:21.02:0,21,233	./.	0/0:29,0:29:27.05:0,27,362	0/1:35,0:34:99:130,0,471	0/1:37,0:37:3.15:3,0,156	0/0:27,0:27:30.09:0,30,426	0/0:29,0:29:23.67:0,24,360	0/0:32,0:32:45.13:0,45,654	0/0:32,0:32:27.08:0,27,387	0/0:31,0:31:42.11:0,42,589	0/1:32,0:32:29.26:29,0,137	0/0:13,0:13:21.03:0,21,271	1/1:11,5:16:15.04:276,15,0	0/1:19,12:31:32.24:593,0,32	0/1:25,14:43:27.18:328,0,27	0/0:27,0:27:24.05:0,24,306	0/0:20,0:21:27.07:0,27,367	0/0:31,0:31:20.86:0,21,310	0/0:30,0:30:27.06:0,27,362	1/1:19,11:32:36.11:725,36,0	0/1:19,7:27:28.07:262,0,28	0/1:16,7:23:5.90:328,0,6
chr10	87059221	.	TG	T	2228.79	PASS	AB=0.856;AC=16;AF=0.286;AN=56;BaseQRankSum=-1.525;DP=464;FS=4.930;HRun=10;HaplotypeScore=64.8826;InbreedingCoeff=0.7031;MQ=87.45;MQ0=3;MQRankSum=0.125;QD=15.27;ReadPosRankSum=4.714;VQSLOD=4.1530;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:0.95:0,1,36	0/0:3,0:3:0.47:0,0,1	0/0:38,0:28:5.80:0,6,229	0/0:30,0:21:20:0,20,119	0/0:16,0:16:16.22:0,16,166	0/1:15,2:17:10.04:10,0,322	0/0:20,0:20:45.88:0,46,461	1/1:12,8:20:24.56:230,25,0	0/0:22,2:24:17.76:0,18,379	0/0:13,0:15:18.05:0,18,199	0/0:4,0:7:3.01:0,3,33	0/0:17,0:17:35.22:0,35,335	0/0:20,0:20:46.22:0,46,446	0/0:10,0:10:6.98:0,7,144	0/0:17,1:18:10.03:0,10,324	0/0:14,0:14:39.02:0,39,397	0/0:2,0:12:8.52:0,9,43	0/1:7,2:9:7.54:8,0,143	1/1:3,8:11:26.98:230,27,0	1/1:6,15:21:59.94:510,60,0	1/1:0,7:7:18:156,18,0	0/0:17,0:17:32.04:0,32,315	0/0:14,0:14:10.86:0,11,263	0/0:16,0:16:27.54:0,28,293	0/0:19,0:19:16.63:0,17,321	1/1:2,20:22:59.99:520,60,0	1/1:3,17:20:44.98:391,45,0	1/1:1,18:18:41.98:365,42,0
chr10	87061299	.	GCC	G	369.54	PASS	AB=0.833;AC=14;AF=0.292;AN=48;BaseQRankSum=-0.789;DP=123;FS=3.629;HRun=9;HaplotypeScore=19.1280;InbreedingCoeff=0.4971;MQ=90.30;MQ0=1;MQRankSum=-1.496;QD=8.80;ReadPosRankSum=0.148;VQSLOD=-0.7457;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:9.02:0,9,123	0/0:2,0:2:0:0,0,0	0/0:16,0:9:24.06:0,24,279	0/1:10,0:9:24.30:24,0,33	./.	0/0:3,0:3:9.03:0,9,146	0/0:9,0:9:24.07:0,24,365	1/1:6,0:6:3:35,3,0	0/0:3,0:3:2.37:0,2,8	0/0:2,0:4:6.01:0,6,58	./.	0/0:6,0:6:14.95:0,15,163	0/0:3,0:3:9.03:0,9,148	0/0:2,0:2:3.01:0,3,47	0/0:6,0:6:9.02:0,9,124	0/0:3,0:3:3.01:0,3,49	0/0:3,0:4:3:0,3,29	0/1:2,1:2:0.01:0,0,0	1/1:2,3:5:9.02:105,9,0	1/1:2,0:2:3.01:35,3,0	1/1:1,5:6:15.04:175,15,0	0/0:3,0:3:3.01:0,3,49	0/0:5,0:5:9.02:0,9,123	0/0:5,0:5:9.03:0,9,148	./.	1/1:4,0:4:6.02:68,6,0	1/1:3,2:5:6.01:70,6,0	./.
chr10	87066466	.	TAAA	T	1108.60	PASS	AB=0.935;AC=9;AF=0.161;AN=56;BaseQRankSum=0.106;DP=461;FS=0.000;HRun=15;HaplotypeScore=71.3711;InbreedingCoeff=0.7594;MQ=64.14;MQ0=6;MQRankSum=0.982;QD=13.86;ReadPosRankSum=4.680;VQSLOD=1.3960;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:36:68.30:0,68,564	1/1:0,2:2:3.01:34,3,0	0/0:17,0:8:10.94:0,11,89	0/0:14,0:6:11.72:0,12,140	0/0:21,0:25:59.15:0,59,879	0/0:21,0:22:45.15:0,45,772	0/0:11,0:16:33:0,33,452	0/0:19,0:33:69.18:0,69,1013	0/0:9,0:10:24.07:0,24,349	1/1:1,12:14:35.96:385,36,0	1/1:2,10:12:14.88:168,15,0	0/0:13,0:13:36.12:0,36,629	0/0:11,0:12:24.06:0,24,378	0/0:5,0:6:13.60:0,14,224	0/0:20,0:20:40.02:0,40,687	0/0:13,0:16:39.12:0,39,649	1/1:3,17:23:58.52:638,59,0	0/0:11,0:19:45.15:0,45,667	0/0:4,0:16:41.81:0,42,598	0/0:3,0:13:27.09:0,27,428	0/0:5,0:10:9.03:0,9,129	0/0:4,0:7:18.06:0,18,306	0/0:10,0:10:21.07:0,21,385	0/0:11,0:13:30.55:0,31,479	0/0:9,0:13:26.15:0,26,349	0/1:13,2:27:37.71:38,0,784	0/0:8,0:19:9.03:0,9,139	0/0:8,0:15:15.05:0,15,231
chr10	87066649	.	T	TA	2875.34	PASS	AB=0.694;AC=22;AF=0.393;AN=56;BaseQRankSum=-9.938;DP=433;FS=1.439;HRun=11;HaplotypeScore=47.3984;InbreedingCoeff=0.7308;MQ=60.68;MQ0=5;MQRankSum=-1.084;QD=16.06;ReadPosRankSum=-1.583;VQSLOD=3.5969;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:43:65.17:0,65,188	1/1:2,6:8:18:172,18,0	0/0:12,0:6:16.75:0,17,119	0/0:5,0:3:2.99:0,3,24	0/0:19,0:19:38.81:0,39,302	0/0:22,0:23:51.86:0,52,383	0/0:18,0:18:44.81:0,45,348	1/1:17,25:42:28.58:618,29,0	0/0:14,0:14:36.75:0,37,281	1/1:3,11:14:33.05:326,33,0	0/1:1,3:5:10.73:80,0,11	0/0:12,0:12:26.81:0,27,204	0/0:8,0:8:17.90:0,18,136	0/0:12,0:12:32.65:0,33,243	0/0:9,0:10:25.93:0,26,191	0/0:18,0:18:32.79:0,33,255	1/1:3,23:26:63.06:627,63,0	0/0:26,0:31:42.91:0,43,453	1/1:9,11:17:14.68:309,15,0	1/1:2,8:10:21.04:213,21,0	1/1:1,6:7:18.04:183,18,0	0/0:1,0:1:2.98:0,3,22	0/1:4,1:5:17.22:25,0,17	0/0:16,0:16:47.78:0,48,365	0/0:11,1:12:2.47:0,2,202	1/1:5,8:13:3.81:201,4,0	1/1:7,16:22:6.87:251,7,0	1/1:3,2:6:8.85:75,9,0
chr10	87069224	.	G	GC	1373.31	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.284;DP=648;FS=19.859;HRun=3;HaplotypeScore=73.2978;InbreedingCoeff=0.9961;MQ=84.87;MQ0=0;MQRankSum=-4.299;QD=36.14;ReadPosRankSum=-0.266;VQSLOD=1.6361;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:38:99:1468,105,0	0/0:10,0:10:30.08:0,30,348	0/0:23,0:23:56.79:0,57,627	0/0:18,0:18:22.35:0,22,313	0/0:23,0:23:68.02:0,68,796	0/0:27,0:27:78.24:0,78,931	0/0:29,0:29:84.21:0,84,971	0/0:35,0:35:99:0,99,1155	0/0:28,0:28:72.22:0,72,863	0/0:20,0:20:57.17:0,57,673	0/0:22,0:22:54.15:0,54,634	0/0:21,0:21:60.16:0,60,705	0/0:32,0:32:96.25:0,96,1118	0/0:22,0:22:63.07:0,63,722	0/0:32,0:32:90.27:0,90,1076	0/0:19,0:19:57.15:0,57,663	0/0:35,0:35:99:0,102,1211	0/0:14,0:14:39.12:0,39,467	0/0:23,0:23:66.19:0,66,780	0/0:15,0:15:42.13:0,42,502	0/0:25,0:25:72.22:0,72,863	0/0:25,0:25:75.23:0,75,899	0/0:19,0:19:51.16:0,51,611	0/0:19,0:19:57.13:0,57,649	0/0:15,0:15:36.11:0,36,431	0/0:21,0:21:54.14:0,54,648	0/0:26,0:26:74.78:0,75,848	0/0:12,0:12:36.11:0,36,430
chr10	87070974	.	AGT	A	364.64	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.886;DP=617;FS=1.258;HRun=0;HaplotypeScore=71.3064;InbreedingCoeff=0.9905;MQ=90.03;MQ0=1;MQRankSum=-2.775;QD=30.39;ReadPosRankSum=1.747;VQSLOD=5.2991;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,166,3125	0/0:11,0:11:33.11:0,33,629	0/0:31,0:31:90.23:0,90,1473	0/0:26,0:26:78.08:0,78,1369	0/0:20,0:20:57.20:0,57,1100	0/0:20,0:20:60.19:0,60,1086	0/0:25,0:25:75.24:0,75,1378	0/0:25,0:25:72.23:0,72,1303	0/0:16,0:16:48.16:0,48,912	0/0:21,0:21:63.22:0,63,1189	0/0:11,0:11:30.10:0,30,551	0/0:24,0:24:69.22:0,69,1297	0/0:25,0:25:72.23:0,72,1319	0/0:21,0:21:63.19:0,63,1150	0/0:18,0:18:54.17:0,54,1001	0/0:27,0:27:78.25:0,78,1432	0/0:41,0:41:99:0,117,2214	1/1:0,12:12:30.10:459,30,0	0/0:24,0:24:69.21:0,69,1235	0/0:12,0:12:33.11:0,33,636	0/0:33,0:32:93.28:0,93,1725	0/0:18,0:18:54.19:0,54,1035	0/0:15,0:15:45.15:0,45,868	0/0:26,0:26:72.21:0,72,1320	0/0:18,0:18:54.18:0,54,1023	0/0:18,0:18:54.16:0,54,1007	0/0:18,0:18:54.19:0,54,1032	0/0:6,0:6:18.06:0,18,338
chr10	87071183	.	C	CA	388.10	PASS	AC=10;AF=0.208;AN=48;BaseQRankSum=2.003;DP=202;FS=50.355;HRun=0;HaplotypeScore=38.4298;InbreedingCoeff=0.7491;MQ=83.41;MQ0=2;MQRankSum=-1.741;QD=9.47;ReadPosRankSum=-0.734;VQSLOD=0.9227;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,10:14:5.95:52,6,0	0/0:2,0:2:6:0,6,52	0/0:21,0:12:0.74:0,1,172	0/0:19,0:13:24.69:0,25,207	0/0:5,0:5:8.99:0,9,75	0/0:5,0:5:10.37:0,10,77	0/0:20,0:20:47.61:0,48,428	1/1:6,0:6:14.88:122,15,0	0/0:11,0:11:29.59:0,30,213	0/0:9,0:9:17.73:0,18,133	0/0:1,0:1:2.99:0,3,23	0/0:10,0:10:23.48:0,23,194	0/0:6,0:6:14.32:0,14,105	0/0:10,0:10:26.98:0,27,233	0/0:6,0:6:14.75:0,15,116	0/0:5,0:5:10.21:0,10,76	0/0:7,0:7:14.96:0,15,120	1/1:3,3:6:8.79:117,9,0	1/1:3,0:3:6:51,6,0	./.	1/1:12,0:12:26.71:195,27,0	0/0:3,0:3:9:0,9,78	0/0:7,0:7:17.94:0,18,148	0/0:7,0:7:15:0,15,144	0/0:7,0:7:17.35:0,17,135	./.	./.	./.
chr10	87075846	.	G	GCACACACACACACACA	12108.81	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=6.641;DP=731;FS=1.676;HRun=0;HaplotypeScore=298.0548;InbreedingCoeff=0.8840;MQ=53.44;MQ0=27;MQRankSum=-12.396;QD=31.45;ReadPosRankSum=-5.079;VQSLOD=2.9860;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:37:24.55:512,25,0	1/1:14,0:13:9.50:128,10,0	0/1:43,0:17:8.29:8,0,157	0/0:23,0:11:6.07:0,6,43	0/0:29,0:29:75.11:0,75,2420	0/0:16,0:16:45.13:0,45,1595	0/0:23,0:23:60.10:0,60,1943	1/1:30,0:26:48.15:1222,48,0	0/0:18,0:18:45.15:0,45,1723	1/1:27,0:26:72.23:1679,72,0	1/1:26,0:23:12.49:142,12,0	0/0:29,0:29:72.05:0,72,2688	0/0:31,0:31:84.29:0,84,3136	0/0:28,0:29:78.18:0,78,2740	0/0:28,0:29:81.26:0,81,3252	0/0:21,0:21:54.18:0,54,1903	1/1:23,0:20:33.99:935,34,0	1/1:26,0:26:37.01:1052,37,0	1/1:23,0:21:54.15:1438,54,0	1/1:3,10:18:3.01:230,3,0	1/1:38,0:33:15.98:469,16,0	0/0:30,0:30:69.22:0,69,2280	0/0:21,0:21:57.18:0,57,2079	0/0:19,0:19:51.17:0,51,1944	0/0:25,0:25:66.16:0,66,1804	1/1:9,17:32:60.62:2206,61,0	1/1:7,1:27:23.86:1662,24,0	1/1:14,0:11:15.01:426,15,0
chr10	87075848	.	A	AC	759.28	PASS	AB=0.739;AC=6;AF=0.107;AN=56;BaseQRankSum=7.957;DP=743;FS=6.343;HRun=1;HaplotypeScore=137.8024;InbreedingCoeff=-0.1243;MQ=53.38;MQ0=28;MQRankSum=-9.437;QD=4.78;ReadPosRankSum=-1.215;VQSLOD=-0.1119;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,15:36:99:104,0,117	0/1:9,5:13:22.86:23,0,128	0/0:42,0:15:35.84:0,36,387	0/0:26,0:13:15.38:0,15,181	0/0:28,0:28:81.26:0,81,1050	0/0:17,0:16:48.16:0,48,622	0/0:25,0:25:72.20:0,72,904	0/0:31,0:27:68.72:0,69,786	0/0:19,0:19:51.15:0,51,648	0/1:20,8:28:99:301,0,489	0/1:13,15:25:49.72:50,0,82	0/0:27,0:27:78.25:0,78,1011	0/0:30,0:30:65.91:0,66,1104	0/0:31,0:30:86.75:0,87,1073	0/0:30,0:30:87.02:0,87,1101	0/0:22,0:22:66.18:0,66,825	0/1:17,8:22:99:180,0,209	0/1:19,6:25:99:227,0,333	0/0:25,0:22:65.19:0,65,707	0/0:18,0:17:10.87:0,11,109	0/0:35,0:30:39.20:0,39,369	0/0:32,0:32:84.25:0,84,1074	0/0:22,0:22:63.17:0,63,789	0/0:19,0:19:57.19:0,57,738	0/0:27,0:27:78.23:0,78,994	0/0:34,0:31:51.30:0,51,609	0/0:29,0:28:12.42:0,12,188	0/0:14,0:11:14.12:0,14,186
chr10	87075859	.	C	CA	2179.93	PASS	AB=0.781;AC=13;AF=0.232;AN=56;BaseQRankSum=7.664;DP=750;FS=19.931;HRun=1;HaplotypeScore=129.9990;InbreedingCoeff=-0.2894;MQ=53.49;MQ0=28;MQRankSum=-7.692;QD=6.47;ReadPosRankSum=1.156;VQSLOD=-0.6079;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,14:38:99:122,0,502	0/1:8,5:12:99:106,0,102	0/0:41,0:15:45.14:0,45,583	0/0:34,0:20:32.20:0,32,569	0/0:30,0:30:84.28:0,84,1163	0/0:20,0:19:57.19:0,57,787	0/0:26,0:26:78.26:0,78,1074	0/1:22,11:29:99:233,0,522	0/0:19,0:19:57.19:0,57,785	0/1:17,12:29:99:628,0,293	0/1:20,10:27:90.02:90,0,120	0/0:31,0:31:87.16:0,87,1185	0/0:31,0:31:93.31:0,93,1286	0/0:31,0:30:90.16:0,90,1197	0/0:28,0:28:84.21:0,84,1149	0/0:23,0:23:66.22:0,66,908	0/1:13,10:20:99:135,0,211	0/1:15,11:26:99:278,0,359	0/1:17,10:24:99:330,0,402	0/1:13,1:13:1.25:1,0,78	0/1:20,10:25:74.72:75,0,117	0/0:29,0:30:75.14:0,75,995	0/0:25,0:25:69.23:0,69,954	0/0:18,0:18:54.18:0,54,748	0/0:25,0:25:75.25:0,75,1031	0/1:29,2:28:99:246,0,409	0/1:25,1:25:62.72:63,0,163	0/1:10,4:11:25.40:25,0,220
chr10	87076242	.	C	CT	2288.43	PASS	AB=0.986;AC=15;AF=0.268;AN=56;BaseQRankSum=-6.830;DP=506;FS=10.640;HRun=8;HaplotypeScore=60.3685;InbreedingCoeff=0.5002;MQ=72.82;MQ0=2;MQRankSum=-0.957;QD=11.68;ReadPosRankSum=-2.058;VQSLOD=1.2188;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:98.97:0,99,890	1/1:0,11:11:30.05:331,30,0	0/0:12,0:9:3.19:0,3,68	0/1:12,0:12:10.99:11,0,20	0/0:37,0:37:98.78:0,99,866	0/0:18,0:18:45.02:0,45,411	0/0:18,0:18:48:0,48,434	0/1:38,0:38:31.49:110,0,31	0/0:17,0:17:41.96:0,42,367	1/1:3,23:26:69.18:784,69,0	1/1:2,15:18:38.81:394,39,0	0/0:14,0:14:32.98:0,33,289	0/0:15,0:15:38.99:0,39,348	0/0:23,0:23:51:0,51,462	0/0:14,0:14:27.01:0,27,247	0/0:13,0:13:32.99:0,33,293	1/1:0,17:19:38.78:410,39,0	1/1:6,15:21:30.19:372,30,0	0/0:13,0:13:16.04:0,16,46	0/1:15,0:15:20.01:20,0,35	0/1:13,0:13:21.35:29,0,21	0/0:6,0:6:18.01:0,18,165	0/0:13,0:13:36.01:0,36,326	0/0:9,0:9:23.92:0,24,203	0/0:17,0:17:51:0,51,458	0/0:21,0:21:1.22:0,1,38	0/1:22,0:22:10.94:11,0,60	0/0:11,0:11:18.83:0,19,60
chr10	87076394	.	G	GCC	538.10	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=-3.763;DP=409;FS=4.146;HRun=7;HaplotypeScore=66.0854;InbreedingCoeff=0.8544;MQ=75.19;MQ0=1;MQRankSum=-2.473;QD=38.44;ReadPosRankSum=1.892;VQSLOD=3.4624;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:57.11:0,57,652	./.	0/0:23,0:20:42.01:0,42,474	0/0:19,0:14:32.96:0,33,359	0/0:12,0:12:24.03:0,24,269	0/0:23,0:23:51.07:0,51,565	0/0:27,0:26:69.13:0,69,781	0/0:19,0:19:48.10:0,48,531	0/0:13,0:13:27.05:0,27,303	0/0:10,0:10:27.05:0,27,301	0/0:11,0:11:21.02:0,21,232	0/0:9,0:9:27.07:0,27,302	0/0:11,0:11:24.04:0,24,268	0/0:11,0:11:26.78:0,27,262	0/0:10,0:10:27.03:0,27,297	0/0:11,0:11:30.04:0,30,334	0/0:23,0:24:59.45:0,59,637	1/1:0,14:14:39.13:632,39,0	0/0:21,0:21:51.04:0,51,566	0/0:10,0:9:12.02:0,12,139	0/0:25,0:25:48.10:0,48,537	0/0:9,0:9:24.07:0,24,279	0/0:6,0:6:18.05:0,18,209	0/0:19,0:19:45.11:0,45,512	0/0:13,0:13:36.04:0,36,377	0/0:10,0:10:30.07:0,30,335	0/0:11,0:11:17.78:0,18,177	0/0:7,0:7:6.01:0,6,70
chr10	87076419	.	GACAC	G	1044.45	PASS	AB=0.863;AC=10;AF=0.185;AN=54;BaseQRankSum=2.928;DP=514;FS=2.424;HRun=0;HaplotypeScore=98.0201;InbreedingCoeff=0.5706;MQ=60.64;MQ0=10;MQRankSum=1.378;QD=11.74;ReadPosRankSum=2.252;VQSLOD=3.2052;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:47:8.73:0,9,112	1/1:1,3:4:4.73:51,5,0	./.	0/0:32,0:16:8.99:0,9,95	0/0:13,0:17:17.77:0,18,322	0/0:21,0:23:44.84:0,45,874	0/0:27,0:31:14.56:0,15,926	0/0:20,0:20:27.07:0,27,395	0/0:15,0:16:30:0,30,632	1/1:9,6:14:15.05:238,15,0	1/1:5,10:15:19.49:258,19,0	0/0:11,0:11:18.06:0,18,374	0/0:14,0:14:39.09:0,39,785	0/0:9,0:13:1.41:0,1,393	0/1:10,1:14:18.31:18,0,404	0/0:8,0:9:8.77:0,9,129	1/1:10,10:23:45.10:626,45,0	0/0:17,0:17:21.07:0,21,346	0/0:24,0:24:30.68:0,31,515	0/0:8,0:12:2.44:0,2,23	0/0:28,0:28:5.97:0,6,72	0/0:11,0:12:23.79:0,24,425	0/0:6,0:7:8.77:0,9,132	0/0:21,0:25:38.84:0,39,709	0/0:13,1:16:26.78:0,27,443	0/1:17,1:18:5.51:6,0,606	0/0:4,0:13:15:0,15,172	0/0:3,0:5:6.02:0,6,111
chr10	87080090	.	TGTGCGTGTGCGTGCGTGC	T	1477.93	PASS	AB=1.000;AC=14;AF=0.259;AN=54;BaseQRankSum=6.762;DP=520;FS=6.494;HRun=0;HaplotypeScore=218.0782;InbreedingCoeff=0.5582;MQ=51.32;MQ0=4;MQRankSum=-3.157;QD=13.20;ReadPosRankSum=-4.559;VQSLOD=0.8577;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:27:9.24:0,9,205	1/1:7,0:7:5.98:47,6,0	1/1:4,0:2:2.50:9,2,0	./.	0/0:14,0:14:33.11:0,33,1634	0/0:10,0:10:24.08:0,24,1210	0/0:36,0:35:96.28:0,96,3990	0/1:12,0:12:83.56:84,0,154	0/0:16,0:16:34.83:0,35,1650	1/1:19,0:19:46.85:948,47,0	1/1:8,0:8:5.95:116,6,0	0/0:19,0:19:48:0,48,1721	0/0:11,0:11:33.11:0,33,1415	0/0:25,0:25:72.04:0,72,3143	0/0:14,0:14:42.12:0,42,1849	0/0:21,0:21:60.21:0,60,3234	1/1:6,22:28:10.51:241,11,0	0/0:22,0:21:9.64:0,10,654	0/0:15,0:14:17.53:0,18,254	0/1:5,0:5:0:0,0,0	0/0:67,0:65:30.12:0,30,179	0/0:11,0:11:24.06:0,24,828	0/0:12,0:12:36.09:0,36,1668	0/0:43,0:43:99:0,123,6248	0/0:27,0:27:50.25:0,50,2094	0/1:14,0:13:99:170,0,116	0/1:15,0:15:22.68:23,0,326	0/0:8,0:7:12.81:0,13,429
chr10	87080092	.	TGCGTGTGCGTGCGTGC	T	1347.98	PASS	AB=1.000;AC=14;AF=0.259;AN=54;BaseQRankSum=7.476;DP=508;FS=5.345;HRun=0;HaplotypeScore=198.7376;InbreedingCoeff=0.5606;MQ=51.31;MQ0=3;MQRankSum=-4.392;QD=12.48;ReadPosRankSum=-3.673;VQSLOD=1.7553;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:26:9.65:0,10,189	1/1:7,0:7:5.98:47,6,0	1/1:2,0:2:2.50:9,2,0	./.	0/0:14,0:14:33.11:0,33,1542	0/0:10,0:10:24.08:0,24,1153	0/0:36,0:35:99:0,102,3830	0/1:12,0:12:83.77:84,0,154	0/0:15,0:15:34.83:0,35,1516	1/1:2,17:19:45.54:911,46,0	1/1:7,0:7:5.95:116,6,0	0/0:19,0:19:48:0,48,1625	0/0:11,0:11:33.11:0,33,1306	0/0:25,0:25:75.05:0,75,3018	0/0:14,0:14:42.12:0,42,1706	0/0:22,0:22:63.22:0,63,3056	1/1:27,0:27:7.12:181,7,0	0/0:21,0:20:25.91:0,26,686	0/0:13,0:12:17.53:0,18,243	0/1:5,0:5:0:0,0,0	0/0:65,0:63:28.50:0,28,175	0/0:11,0:11:24.06:0,24,769	0/0:12,0:12:36.11:0,36,1552	0/0:43,0:43:99:0,123,5869	0/0:25,0:25:50.38:0,50,2014	0/1:13,0:12:14.34:134,0,14	0/1:15,0:15:24.14:24,0,293	0/0:9,0:8:12.81:0,13,378
chr10	87080100	.	C	CGT	1260.65	PASS	AB=1.000;AC=19;AF=0.380;AN=50;BaseQRankSum=9.876;DP=507;FS=0.550;HRun=0;HaplotypeScore=101.0842;InbreedingCoeff=0.6781;MQ=49.53;MQ0=4;MQRankSum=-8.585;QD=5.89;ReadPosRankSum=-4.281;VQSLOD=1.8817;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:28:6.88:60,7,0	./.	./.	./.	0/0:12,0:12:27.06:0,27,349	0/0:11,0:11:24.08:0,24,343	0/0:38,0:36:96.18:0,96,1211	1/1:14,0:14:37.96:320,38,0	0/0:15,0:15:31.48:0,31,440	0/1:19,0:19:9.47:53,0,9	1/1:6,0:6:2.60:10,3,0	0/0:21,0:21:41.97:0,42,570	0/0:12,0:12:33.04:0,33,441	0/0:22,0:22:60.18:0,60,836	0/0:12,1:13:0.05:0,0,456	0/0:22,0:22:63.17:0,63,845	0/0:25,0:25:2.96:0,3,16	0/1:21,0:20:76.17:143,0,76	1/1:13,0:12:14.08:86,14,0	0/1:5,0:5:0:0,0,0	1/1:62,0:59:9.01:90,9,0	0/0:10,0:9:17.99:0,18,215	0/0:11,0:11:33.07:0,33,433	0/0:47,0:47:99:0,123,1672	0/0:26,0:26:51.10:0,51,652	1/1:14,1:14:38.52:367,39,0	1/1:8,6:14:22.48:201,22,0	1/1:12,0:11:11.97:109,12,0
chr10	87080102	.	TGC	T	2273.93	PASS	AB=0.670;AC=19;AF=0.396;AN=48;BaseQRankSum=10.094;DP=498;FS=0.000;HRun=0;HaplotypeScore=93.3896;InbreedingCoeff=0.6935;MQ=49.69;MQ0=4;MQRankSum=-6.523;QD=10.06;ReadPosRankSum=-3.002;VQSLOD=2.5646;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,9:29:6.28:82,6,0	./.	./.	./.	0/0:13,0:13:30.06:0,30,449	0/0:11,0:11:24.08:0,24,420	0/0:39,0:37:99:0,102,1697	0/1:4,9:13:4.65:352,0,5	0/0:14,0:14:31.77:0,32,593	1/1:18,0:19:36.42:300,36,0	1/1:3,2:6:3.01:35,3,0	0/0:20,0:20:45.14:0,45,765	0/0:12,0:12:36.02:0,36,617	0/0:22,0:22:63.16:0,63,1099	0/0:13,0:13:38.96:0,39,660	0/0:22,0:22:63.21:0,63,1142	1/1:23,2:25:9.06:74,9,0	0/1:15,5:19:68.17:376,0,68	1/1:4,6:9:11.93:150,12,0	./.	1/1:5,52:55:14.68:201,15,0	0/0:10,0:9:18.03:0,18,293	0/0:12,0:12:36.07:0,36,554	0/0:44,0:44:99:0,123,2243	0/0:26,0:26:56.75:0,57,961	1/1:4,9:14:37:385,37,0	1/1:6,7:13:25.51:304,26,0	0/1:5,8:12:20.68:199,0,21
chr10	87080106	.	TGC	T	895.63	PASS	AB=0.976;AC=15;AF=0.313;AN=48;BaseQRankSum=11.033;DP=505;FS=0.000;HRun=0;HaplotypeScore=98.4310;InbreedingCoeff=0.4725;MQ=49.42;MQ0=5;MQRankSum=-6.323;QD=4.57;ReadPosRankSum=-3.052;VQSLOD=1.7443;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:27:0.41:0,0,2	./.	./.	./.	0/0:10,0:10:14.56:0,15,263	0/0:11,0:11:0.73:0,1,182	0/0:41,0:40:26.38:0,26,933	0/1:13,2:15:24.30:141,0,24	0/0:13,0:13:17.84:0,18,371	1/1:20,0:20:31.89:216,32,0	1/1:6,0:6:2.99:24,3,0	0/0:22,0:22:32.84:0,33,562	0/0:12,0:12:32.88:0,33,382	0/0:21,0:21:36.81:0,37,849	0/0:13,0:13:31.84:0,32,402	0/0:22,0:22:44.06:0,44,750	0/1:26,0:26:0.08:8,0,0	0/1:20,0:19:77.26:158,0,77	1/1:9,0:8:12.61:61,13,0	./.	1/1:57,0:54:8.39:84,8,0	0/0:10,0:9:6.87:0,7,185	0/0:12,0:12:17.60:0,18,341	0/0:46,0:46:85.30:0,85,1775	0/0:26,0:26:27.31:0,27,481	1/1:14,2:15:24.85:200,25,0	0/1:14,0:14:4.25:130,0,4	0/1:13,0:12:19.29:34,0,19
chr10	87080108	.	CGT	C	361.35	PASS	AB=0.912;AC=14;AF=0.292;AN=48;BaseQRankSum=3.548;DP=518;FS=0.752;HRun=0;HaplotypeScore=101.7648;InbreedingCoeff=-0.3610;MQ=49.19;MQ0=5;MQRankSum=0.797;QD=1.29;ReadPosRankSum=-0.215;VQSLOD=1.3201;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:29:3:0,3,27	./.	./.	./.	0/1:9,1:10:18.86:19,0,166	0/1:9,1:11:55.52:56,0,80	0/1:35,7:40:99:174,0,524	0/1:16,0:16:28.53:29,0,110	0/1:12,2:14:15.85:16,0,212	0/0:20,0:20:9.07:0,9,38	./.	0/0:18,4:22:2.17:0,2,420	0/0:11,0:12:15.04:0,15,210	0/1:20,2:22:16.68:17,0,596	0/0:11,0:11:4.07:0,4,213	0/1:20,2:22:31.70:32,0,419	0/0:28,0:28:4.81:0,5,82	0/1:20,0:19:3.11:3,0,271	0/0:9,0:8:4.52:0,5,24	0/0:5,0:5:0:0,0,0	1/1:60,0:57:1.99:17,2,0	0/1:8,2:9:21.90:22,0,126	0/1:11,1:12:9.96:10,0,258	0/0:45,3:48:0.55:0,1,1263	0/1:23,3:27:66:66,0,346	0/0:19,0:18:0.51:0,1,68	0/1:14,0:14:20.61:29,0,21	0/0:12,0:11:15.94:0,16,130
chr10	87080428	.	GT	G	4317.75	PASS	AB=0.882;AC=25;AF=0.446;AN=56;BaseQRankSum=7.249;DP=581;FS=1.113;HRun=11;HaplotypeScore=66.0601;InbreedingCoeff=0.8984;MQ=74.42;MQ0=0;MQRankSum=-2.316;QD=17.34;ReadPosRankSum=0.998;VQSLOD=5.8749;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:36:92.56:0,93,901	1/1:2,5:7:8.97:74,9,0	0/0:25,1:18:3.70:0,4,210	0/0:14,0:12:7.72:0,8,47	0/0:18,0:18:48.11:0,48,502	0/0:22,0:23:62.99:0,63,653	0/0:22,0:22:53.95:0,54,549	1/1:6,20:26:59.85:484,60,0	0/0:23,0:27:74.48:0,74,741	1/1:2,18:20:53.93:443,54,0	1/1:1,11:12:29.96:246,30,0	0/0:19,0:21:44.93:0,45,449	0/1:13,2:15:7.19:7,0,335	0/0:16,0:16:45.08:0,45,457	0/0:25,0:25:57.61:0,58,602	0/0:18,1:19:26.47:0,26,474	1/1:7,29:38:31.14:628,31,0	1/1:3,26:29:74.90:615,75,0	1/1:3,12:14:32.95:271,33,0	1/1:2,10:12:29.96:246,30,0	1/1:2,12:14:29.96:246,30,0	0/0:19,0:19:53.95:0,54,546	0/0:18,0:18:42.11:0,42,446	0/0:25,0:26:35.54:0,36,547	0/0:20,1:21:51.12:0,51,537	1/1:4,23:27:33.92:485,34,0	1/1:5,16:21:24.69:346,25,0	1/1:4,9:13:28.75:227,29,0
chr10	87081192	.	GCA	G	11737.40	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=16.762;DP=1027;FS=7.327;HRun=0;HaplotypeScore=144.9993;InbreedingCoeff=0.9813;MQ=58.94;MQ0=13;MQRankSum=0.984;QD=25.19;ReadPosRankSum=1.768;VQSLOD=5.7341;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:58:99:546,110,0	1/1:3,11:14:27.04:320,27,0	0/0:50,0:8:6.02:0,6,96	0/0:61,0:20:35.75:0,36,461	0/0:20,0:20:47.88:0,48,729	0/0:30,0:30:81.22:0,81,1270	0/0:36,0:37:96.05:0,96,1549	1/1:9,28:35:72.22:888,72,0	0/0:27,1:28:43.74:0,44,1232	1/1:10,39:49:99:1448,120,0	1/1:7,11:18:21.07:262,21,0	0/0:39,0:39:96.33:0,96,1585	0/0:42,0:42:82.95:0,83,1862	0/0:44,0:43:99:0,111,1827	0/0:43,0:43:99:0,120,1972	0/0:38,0:38:93.32:0,93,1533	1/1:9,31:40:92.20:1214,92,0	1/1:5,12:16:12.78:454,13,0	1/1:3,12:15:30.10:375,30,0	1/1:6,21:26:57.06:687,57,0	1/1:14,92:105:99:3039,243,0	0/0:28,0:28:72.25:0,72,1177	0/0:18,0:18:45.15:0,45,725	0/0:45,1:46:76.83:0,77,1763	0/0:36,1:37:61.79:0,62,1521	1/1:5,33:39:81.18:1229,81,0	1/1:1,22:22:63.20:788,63,0	1/1:1,20:21:39.12:488,39,0
chr10	87081429	.	T	TAC	22847.97	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-20.373;DP=1065;FS=10.964;HRun=0;HaplotypeScore=122.5420;InbreedingCoeff=0.9997;MQ=62.44;MQ0=9;MQRankSum=-2.599;QD=41.69;ReadPosRankSum=0.516;VQSLOD=5.9202;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,58:67:99:3027,181,0	1/1:2,11:13:36.12:620,36,0	0/0:37,0:30:69.08:0,69,841	0/0:50,0:33:88.89:0,89,1031	0/0:31,0:31:81.27:0,81,1077	0/0:22,0:22:63.18:0,63,807	0/0:47,0:47:99:0,121,1536	1/1:13,43:57:99:2164,132,0	0/0:24,0:24:57.17:0,57,741	1/1:3,51:54:99:2411,150,0	1/1:1,29:31:78.15:1350,78,0	0/0:37,0:37:99:0,105,1397	0/0:34,0:34:93.24:0,93,1173	0/0:32,0:32:90.24:0,90,1130	0/0:42,0:42:99:0,111,1445	0/0:33,0:33:87.28:0,87,1158	1/1:12,20:32:78.22:1268,78,0	1/1:9,26:34:66.13:1418,66,0	1/1:5,21:24:57.11:917,57,0	1/1:3,38:41:99:1817,105,0	1/1:9,91:102:99:3938,229,0	0/0:32,0:32:93.31:0,93,1238	0/0:23,0:23:60.14:0,60,781	0/0:46,0:46:99:0,111,1461	0/0:27,0:27:81.24:0,81,1048	1/1:3,43:47:99:2257,132,0	1/1:1,28:27:72.25:1245,72,0	1/1:2,9:11:24.08:415,24,0
chr10	87081521	.	TAC	T	1748.74	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.940;DP=852;FS=19.560;HRun=0;HaplotypeScore=137.3429;InbreedingCoeff=0.9382;MQ=59.33;MQ0=14;MQRankSum=-9.522;QD=19.65;ReadPosRankSum=-0.820;VQSLOD=2.5321;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,1:54:99:0,112,2361	1/1:1,8:10:23.91:284,24,0	0/0:40,2:18:14.39:0,14,341	0/0:39,0:18:38.49:0,38,566	0/0:22,0:22:60.21:0,60,1002	0/0:30,0:30:72.22:0,72,1187	0/0:29,0:29:63.18:0,63,1009	0/0:36,0:35:84.28:0,84,1313	0/0:30,0:30:81.26:0,81,1329	1/1:8,33:39:93.23:1160,93,0	1/1:6,14:20:8.99:100,9,0	0/0:36,0:36:99:0,99,1637	0/0:29,0:29:84.26:0,84,1370	0/0:21,0:21:60.21:0,60,1011	0/0:38,0:38:93.21:0,93,1535	0/0:36,0:36:99:0,105,1768	1/1:10,7:17:29.61:361,30,0	0/0:37,0:37:99:0,100,1591	0/0:17,0:16:39.13:0,39,655	0/0:22,0:22:57.20:0,57,961	0/0:73,0:71:99:0,162,2685	0/0:22,0:22:51.17:0,51,857	0/0:24,0:24:69.24:0,69,1164	0/0:40,0:40:99:0,99,1644	0/0:20,0:20:57.20:0,57,962	0/0:27,2:29:4.13:0,4,1188	0/0:24,0:24:66.22:0,66,1091	0/0:12,0:12:30.10:0,30,506
chr10	87081537	.	TA	T	1676.90	PASS	AB=0.912;AC=9;AF=0.161;AN=56;BaseQRankSum=10.187;DP=815;FS=35.483;HRun=8;HaplotypeScore=124.9644;InbreedingCoeff=0.8789;MQ=62.00;MQ0=7;MQRankSum=-7.497;QD=13.97;ReadPosRankSum=-2.052;VQSLOD=0.8402;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,129,1527	1/1:0,9:9:24.04:232,24,0	0/0:32,0:19:30.49:0,30,429	0/0:31,0:21:30.36:0,30,326	0/0:29,0:29:83.02:0,83,980	0/0:30,0:30:84.25:0,84,1004	0/0:22,0:22:60.16:0,60,703	0/0:39,0:39:99:0,105,1252	0/0:25,0:25:66.20:0,66,797	1/1:5,39:42:99:1157,120,0	1/1:1,20:21:18.10:182,18,0	0/0:36,0:36:99:0,99,1196	0/0:31,0:31:78.22:0,78,929	0/0:22,0:22:48.15:0,48,580	0/0:34,0:34:81.24:0,81,968	0/0:36,0:36:99:0,99,1171	1/1:5,9:14:27.03:261,27,0	0/0:32,0:32:64.72:0,65,795	0/0:17,0:17:42.12:0,42,497	0/0:25,0:25:66.20:0,66,797	0/0:62,1:62:99:0,154,1789	0/0:18,0:18:54.16:0,54,642	0/0:26,0:26:66.16:0,66,781	0/0:36,0:36:90.22:0,90,1058	0/0:21,0:21:60.18:0,60,725	0/1:28,3:31:8.66:9,0,755	0/0:26,0:26:75.23:0,75,906	0/0:14,0:14:36.11:0,36,435
chr10	87081577	.	TAC	T	5214.97	PASS	AB=0.933;AC=15;AF=0.268;AN=56;BaseQRankSum=8.761;DP=757;FS=1.530;HRun=0;HaplotypeScore=109.2545;InbreedingCoeff=0.8984;MQ=56.41;MQ0=10;MQRankSum=0.798;QD=21.46;ReadPosRankSum=-0.306;VQSLOD=5.1948;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,1:37:87.28:0,87,1414	0/0:8,0:8:21.07:0,21,337	0/0:37,0:17:38.63:0,39,546	0/0:35,0:24:52.85:0,53,801	0/0:31,0:31:81.26:0,81,1318	0/0:35,0:35:96.33:0,96,1592	0/0:30,0:30:78.22:0,78,1264	1/1:17,32:43:31.46:907,31,0	0/0:21,0:21:54.17:0,54,867	0/0:39,0:38:96.33:0,96,1590	0/0:20,0:20:51.17:0,51,846	0/0:26,1:27:31.38:0,31,1057	0/0:23,0:23:63.22:0,63,1036	0/0:15,0:15:42.14:0,42,698	0/0:24,1:25:31.37:0,31,1059	0/0:26,1:27:25.32:0,25,903	0/0:15,0:16:42.14:0,42,693	0/0:21,0:22:13.83:0,14,642	1/1:4,12:13:33.08:402,33,0	1/1:5,23:28:63.20:795,63,0	1/1:17,43:56:99:1486,120,0	0/0:24,1:26:37.37:0,37,1107	0/0:17,0:17:45.12:0,45,694	0/1:26,2:28:9.43:9,0,931	0/0:20,0:20:54.18:0,54,892	1/1:9,17:26:7.39:632,7,0	1/1:4,14:18:42.13:530,42,0	1/1:3,15:18:36.11:454,36,0
chr10	87081648	.	TACAC	T	2947.68	PASS	AB=0.879;AC=13;AF=0.260;AN=50;BaseQRankSum=2.736;DP=764;FS=2.270;HRun=0;HaplotypeScore=139.7740;InbreedingCoeff=0.6937;MQ=53.25;MQ0=39;MQRankSum=-2.563;QD=13.65;ReadPosRankSum=1.081;VQSLOD=3.6300;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:33:60.20:0,60,1111	0/0:5,0:9:9.03:0,9,188	./.	./.	0/0:28,0:28:45.15:0,45,1075	0/0:23,0:23:38.87:0,39,838	0/0:31,0:35:44.29:0,44,870	0/1:25,6:29:52.12:205,0,52	0/0:17,0:17:36.11:0,36,783	0/0:23,0:35:52.99:0,53,920	0/0:9,0:16:18.06:0,18,359	0/0:25,0:25:48.09:0,48,1005	0/1:15,1:16:20.63:21,0,500	0/0:22,0:23:41.86:0,42,837	0/0:29,1:33:50.91:0,51,1101	0/0:18,0:18:39.13:0,39,925	0/0:20,0:29:54.16:0,54,974	0/1:14,0:17:4.93:60,0,5	1/1:12,4:15:12.04:184,12,0	1/1:17,11:28:29.92:477,30,0	1/1:31,15:46:35.95:834,36,0	0/0:21,0:22:35.47:0,35,596	0/0:12,0:15:12.98:0,13,454	0/0:36,1:38:18.66:0,19,1265	0/0:21,0:21:36.12:0,36,849	1/1:27,14:38:31.19:869,31,0	1/1:10,7:17:30.10:474,30,0	./.
chr10	87082213	.	C	CG	880.79	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-1.280;DP=370;FS=2.303;HRun=1;HaplotypeScore=56.3466;InbreedingCoeff=0.8030;MQ=42.88;MQ0=40;MQRankSum=-0.107;QD=7.73;ReadPosRankSum=-1.566;VQSLOD=0.2592;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:19:25.81:0,26,196	0/0:7,0:6:8.89:0,9,62	0/0:5,0:1:2.22:0,2,7	0/1:6,0:3:1.94:2,0,3	0/0:21,0:20:32.57:0,33,246	0/0:13,0:12:17.53:0,18,115	0/0:9,0:9:23.70:0,24,170	1/1:13,0:10:20.79:142,21,0	0/0:15,0:13:16.81:0,17,133	0/0:15,0:14:32.70:0,33,237	0/0:12,0:12:26.85:0,27,212	0/0:11,0:9:15.45:0,15,100	0/0:5,0:5:5.94:0,6,44	0/0:10,0:10:23.61:0,24,154	0/0:14,0:13:23.47:0,23,162	0/0:7,0:6:14.96:0,15,124	0/0:28,0:23:44.47:0,44,317	0/0:12,0:10:20.88:0,21,170	1/1:14,0:11:23.87:193,24,0	1/1:17,0:15:29.69:212,30,0	1/1:16,0:13:12.41:94,12,0	0/0:12,0:11:14.84:0,15,109	0/0:9,0:9:11.63:0,12,65	0/0:11,0:9:5.92:0,6,43	0/0:13,0:13:17.80:0,18,138	1/1:19,0:18:5.12:267,5,0	1/1:10,0:9:17.91:138,18,0	1/1:9,10:14:2.80:13,3,0
chr10	87083971	.	A	ATGTG	2768.07	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=4.043;DP=646;FS=13.837;HRun=0;HaplotypeScore=144.7786;InbreedingCoeff=0.7661;MQ=55.35;MQ0=13;MQRankSum=-4.711;QD=15.64;ReadPosRankSum=-1.256;VQSLOD=2.0985;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:33:24.63:0,25,609	1/1:6,7:13:24.08:578,24,0	0/0:27,0:10:13.47:0,13,209	0/0:19,0:9:5.80:0,6,67	0/0:20,0:20:31.85:0,32,591	0/1:19,0:19:7.45:7,0,485	0/0:14,0:17:29.44:0,29,375	0/0:21,0:24:24.40:0,24,250	0/0:16,0:16:33.11:0,33,535	1/1:18,17:35:54.18:1183,54,0	1/1:11,15:27:24.29:519,24,0	0/0:24,0:24:46.85:0,47,830	0/0:14,0:14:30.10:0,30,479	0/0:21,0:22:54.15:0,54,807	0/0:30,0:31:65.99:0,66,1016	0/0:16,0:17:42.13:0,42,621	1/1:10,1:25:15.05:282,15,0	1/1:11,8:19:17.80:352,18,0	0/1:37,0:35:24.12:24,0,585	0/0:22,0:23:13.35:0,13,673	0/0:29,0:32:30.19:0,30,696	0/0:8,0:11:19.59:0,20,228	0/0:10,0:10:24.08:0,24,363	0/0:21,0:22:39.08:0,39,533	0/0:26,0:27:47.68:0,48,727	0/0:28,0:30:57.14:0,57,749	0/0:33,0:33:63.21:0,63,1020	0/0:14,0:13:31.55:0,32,435
chr10	87084557	.	C	CAA	5083.86	PASS	AB=0.565;AC=25;AF=0.446;AN=56;BaseQRankSum=-0.707;DP=450;FS=12.849;HRun=10;HaplotypeScore=59.3869;InbreedingCoeff=0.9028;MQ=67.78;MQ0=0;MQRankSum=0.138;QD=20.17;ReadPosRankSum=-0.700;VQSLOD=2.0201;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:25:44.92:158,45,0	1/1:2,0:8:12.48:44,12,0	0/0:10,0:10:3.03:0,3,108	0/0:10,0:9:10.53:0,11,95	0/0:22,0:22:45.03:0,45,458	0/0:19,0:19:45.06:0,45,458	0/0:12,0:14:14.49:0,14,257	1/1:10,23:34:72.23:1052,72,0	0/0:9,0:9:21.02:0,21,213	0/1:3,0:13:2.05:78,0,2	1/1:3,0:18:37.15:130,37,0	0/0:12,0:13:35.80:0,36,347	0/0:11,0:11:30.06:0,30,305	0/0:7,0:8:11.76:0,12,174	0/0:12,0:12:27.03:0,27,274	0/0:14,0:14:24.89:0,25,240	1/1:4,1:25:45.43:194,45,0	1/1:6,0:15:21.03:200,21,0	1/1:4,14:21:50.62:678,51,0	1/1:8,15:28:58.61:735,59,0	1/1:3,3:6:9.03:134,9,0	0/0:6,0:6:15.03:0,15,153	0/0:17,0:17:36.05:0,36,359	0/0:8,0:8:24.05:0,24,244	0/0:25,0:25:57.10:0,57,580	1/1:7,18:27:57.19:840,57,0	1/1:4,12:18:35.60:484,36,0	1/1:2,10:14:24.08:358,24,0
chr10	87086124	.	GTTA	G	781.28	PASS	AB=0.786;AC=23;AF=0.479;AN=48;BaseQRankSum=6.423;DP=283;FS=2.067;HRun=0;HaplotypeScore=42.7373;InbreedingCoeff=0.5342;MQ=75.94;MQ0=1;MQRankSum=-0.236;QD=5.11;ReadPosRankSum=-0.347;VQSLOD=1.3246;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,6:12:9.03:119,9,0	1/1:5,0:6:2.97:20,3,0	./.	./.	1/1:5,5:10:12.04:158,12,0	0/0:12,0:12:15.05:0,15,287	1/1:2,1:3:3.01:40,3,0	0/0:27,0:26:15.04:0,15,246	0/0:3,0:3:3.01:0,3,58	1/1:12,0:13:2.98:21,3,0	0/1:6,0:12:0:0,0,0	0/0:8,0:8:3.01:0,3,58	0/0:5,0:5:3.01:0,3,49	0/0:6,0:6:3.01:0,3,58	0/0:8,0:8:6.01:0,6,83	0/0:7,0:7:9.01:0,9,139	1/1:13,0:14:2.39:20,2,0	1/1:8,0:12:8.93:63,9,0	1/1:11,0:16:11.90:84,12,0	1/1:11,7:18:15.05:194,15,0	0/1:4,0:5:0:0,0,0	./.	./.	0/0:4,0:4:3.01:0,3,58	0/1:10,2:12:21.57:22,0,270	0/0:6,0:6:9.03:0,9,171	1/1:12,7:19:15.05:198,15,0	0/0:28,0:28:33.11:0,33,634
chr10	87086561	.	TTTTA	T	873.40	PASS	AC=12;AF=0.250;AN=48;BaseQRankSum=0.988;DP=249;FS=3.079;HRun=0;HaplotypeScore=45.4485;InbreedingCoeff=0.5818;MQ=69.12;MQ0=1;MQRankSum=0.301;QD=10.28;ReadPosRankSum=-2.258;VQSLOD=2.0199;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:14:15.05:0,15,262	0/0:6,0:6:3.01:0,3,36	./.	./.	0/0:8,0:8:3.01:0,3,70	0/0:14,0:14:27.09:0,27,638	0/0:2,0:2:3.01:0,3,71	1/1:24,14:38:41.96:471,42,0	0/0:6,0:6:3.01:0,3,71	0/0:11,0:11:9.03:0,9,116	0/0:9,0:9:9.03:0,9,112	0/0:6,0:6:6.02:0,6,142	0/0:4,0:4:3.01:0,3,67	0/0:6,0:6:12.04:0,12,245	0/0:4,0:4:9.03:0,9,212	0/0:6,0:6:3.01:0,3,71	0/0:13,0:16:15:0,15,164	0/0:8,0:23:42.10:0,42,691	1/1:11,3:14:9.03:128,9,0	1/1:1,1:2:3.01:47,3,0	1/1:5,0:5:3.01:47,3,0	./.	0/0:6,0:6:6.02:0,6,141	0/0:2,0:2:6.02:0,6,142	0/0:3,0:3:9.03:0,9,213	./.	1/1:5,7:12:6.02:94,6,0	1/1:7,7:14:15.05:234,15,0
chr10	87087770	.	CA	C	1550.26	PASS	AB=0.876;AC=14;AF=0.269;AN=52;BaseQRankSum=8.380;DP=487;FS=3.803;HRun=12;HaplotypeScore=91.2599;InbreedingCoeff=0.7260;MQ=40.35;MQ0=37;MQRankSum=-7.312;QD=9.51;ReadPosRankSum=1.062;VQSLOD=3.2312;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:30,1:27:8.87:9,0,79	0/0:8,0:6:8.85:0,9,74	./.	./.	0/0:24,0:20:24.48:0,24,233	0/0:15,0:16:38.24:0,38,344	0/0:22,0:17:39.08:0,39,395	0/1:13,5:14:15.37:78,0,15	0/0:15,0:15:28.75:0,29,233	0/0:24,0:24:37.48:0,37,276	0/0:7,0:12:5.80:0,6,34	0/0:16,0:15:30.49:0,30,293	0/0:17,0:17:33.04:0,33,326	0/0:16,1:14:6.62:0,7,224	0/0:17,1:16:29.72:0,30,272	0/0:13,0:12:18:0,18,170	0/0:18,0:16:16.17:0,16,142	0/0:20,0:20:32.90:0,33,316	1/1:9,6:15:6.69:212,7,0	1/1:12,13:24:56.77:438,57,0	1/1:7,0:3:6.14:29,6,0	0/0:20,1:19:32.89:0,33,310	0/0:19,0:20:26.56:0,27,246	0/0:13,0:10:15.01:0,15,145	0/0:18,0:18:35.89:0,36,342	1/1:10,13:21:53.77:414,54,0	1/1:12,14:24:22.24:249,22,0	1/1:10,6:15:38.84:299,39,0
chr10	87087771	.	A	AG	216.22	PASS	AB=0.819;AC=7;AF=0.135;AN=52;BaseQRankSum=9.835;DP=504;FS=12.165;HRun=0;HaplotypeScore=109.8914;InbreedingCoeff=0.0719;MQ=39.78;MQ0=37;MQRankSum=-5.695;QD=1.63;ReadPosRankSum=-1.043;VQSLOD=1.7253;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:27:35.23:0,35,300	0/0:10,0:8:4.37:0,4,78	./.	./.	0/0:24,0:20:35.94:0,36,394	0/0:17,0:16:27.89:0,28,466	0/0:21,0:16:42.09:0,42,540	0/0:17,0:13:38.74:0,39,295	0/0:17,0:15:14.60:0,15,309	0/0:25,0:25:54.95:0,55,386	0/0:15,0:12:14.22:0,14,91	0/0:15,0:14:33.38:0,33,411	0/0:18,0:17:39.06:0,39,476	0/0:18,0:14:32.28:0,32,420	0/0:18,0:16:36.02:0,36,438	0/0:12,0:11:27:0,27,299	0/0:18,0:15:12.08:0,12,114	0/0:22,0:20:37.54:0,38,446	0/1:15,5:18:63.31:63,0,179	0/1:23,7:29:65.58:66,0,280	1/1:6,2:4:3.87:19,4,0	0/0:20,0:18:39.06:0,39,475	0/0:20,0:19:34.98:0,35,408	0/0:13,0:10:21.05:0,21,255	0/0:20,0:20:47.26:0,47,555	0/1:24,5:26:99:107,0,242	0/1:23,4:25:16.69:17,0,246	0/1:13,6:18:69.74:70,0,149
chr10	87087779	.	AAAAGAAAGAAAG	A	574.06	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=0.995;DP=509;FS=7.538;HRun=0;HaplotypeScore=195.3989;InbreedingCoeff=0.7565;MQ=40.04;MQ0=33;MQRankSum=-3.239;QD=22.96;ReadPosRankSum=0.639;VQSLOD=2.2061;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,12:22:27.01:667,27,0	0/0:5,0:12:18.53:0,19,626	./.	./.	0/0:25,0:22:21.07:0,21,846	0/0:17,0:16:33.11:0,33,1738	0/0:24,0:19:30.03:0,30,1253	0/0:21,0:17:30.10:0,30,796	0/0:16,0:14:24.08:0,24,1213	0/0:27,0:27:35.15:0,35,1518	0/0:14,0:11:6.02:0,6,282	0/0:16,0:15:25.02:0,25,1220	0/0:18,0:17:21.54:0,22,1004	0/0:15,0:11:21.07:0,21,1133	0/0:18,0:16:21.07:0,21,964	0/0:9,0:9:12.51:0,13,641	0/0:19,0:17:18.53:0,19,718	0/0:22,0:20:30.10:0,30,1661	0/0:22,0:20:44.18:0,44,1604	0/0:29,0:29:66.21:0,66,2316	0/0:9,0:5:6:0,6,92	0/0:20,0:17:27.55:0,28,1288	0/0:17,0:18:18.06:0,18,917	0/0:11,0:8:12.04:0,12,631	0/0:21,0:21:36.12:0,36,1883	0/0:30,0:27:66.23:0,66,2292	0/0:28,0:25:51.18:0,51,1901	0/0:20,0:19:45.15:0,45,1558
chr10	87087826	.	A	AGG	690.80	PASS	AB=0.915;AC=5;AF=0.089;AN=56;BaseQRankSum=3.228;DP=560;FS=8.473;HRun=0;HaplotypeScore=114.8797;InbreedingCoeff=-0.0997;MQ=63.43;MQ0=2;MQRankSum=-7.912;QD=4.73;ReadPosRankSum=-0.455;VQSLOD=2.0229;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:45.14:0,45,641	0/0:9,0:9:17.69:0,18,249	0/0:16,0:13:36.11:0,36,562	0/0:7,0:6:15.05:0,15,245	0/0:22,0:22:63.20:0,63,1000	0/0:26,0:25:78.24:0,78,1224	0/0:19,0:19:54.18:0,54,877	0/0:21,0:20:51.17:0,51,830	0/0:16,0:16:48.12:0,48,750	0/0:31,0:31:84.26:0,84,1347	0/0:11,0:11:28.05:0,28,486	0/0:22,0:22:60.19:0,60,934	0/0:20,0:20:54.17:0,54,855	0/0:15,0:15:45.15:0,45,732	0/0:23,0:22:63.21:0,63,1002	0/0:9,0:9:24.08:0,24,392	0/0:21,0:21:45.14:0,45,709	0/0:25,0:25:69.19:0,69,1096	0/1:29,6:34:99:203,0,1132	0/1:33,0:33:99:143,0,1151	0/0:10,0:8:14.68:0,15,211	0/0:20,0:20:54.18:0,54,869	0/0:15,0:15:45.14:0,45,710	0/0:11,0:11:27.08:0,27,419	0/0:22,0:22:63.22:0,63,1027	0/1:34,1:33:99:113,0,1167	0/1:16,8:23:99:329,0,662	0/1:19,0:18:19.37:19,0,715
chr10	87087886	.	A	AGAGC	6371.99	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-10.778;DP=599;FS=4.434;HRun=0;HaplotypeScore=105.1845;InbreedingCoeff=0.9832;MQ=76.39;MQ0=0;MQRankSum=-1.103;QD=44.87;ReadPosRankSum=-0.264;VQSLOD=5.0051;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:87.30:0,87,1461	0/0:5,0:5:12.04:0,12,204	0/0:15,0:15:15.05:0,15,211	0/0:17,0:17:24.07:0,24,373	0/0:25,0:25:57.19:0,57,963	0/0:18,0:18:45.14:0,45,736	0/0:28,0:28:75.21:0,75,1236	1/1:10,4:15:12.02:248,12,0	0/0:18,0:18:45.15:0,45,763	0/0:32,0:32:72.25:0,72,1213	0/0:24,0:24:54.18:0,54,916	0/0:26,0:26:60.19:0,60,992	0/0:21,0:21:48.11:0,48,745	0/0:20,0:20:48.15:0,48,787	0/0:32,0:32:72.25:0,72,1218	0/0:12,0:12:21.07:0,21,356	0/0:26,0:26:66.19:0,66,1074	0/0:23,0:23:48.16:0,48,815	1/1:11,16:29:63.19:1396,63,0	1/1:7,7:14:18.06:450,18,0	1/1:7,21:30:45.02:1123,45,0	0/0:23,0:23:60.20:0,60,1002	0/0:16,0:16:33.07:0,33,529	0/0:24,0:24:66.07:0,66,1086	0/0:18,0:18:42.14:0,42,708	1/1:7,17:24:54.19:1290,54,0	1/1:3,15:19:45.15:1118,45,0	1/1:1,10:11:30.10:748,30,0
chr10	87089708	.	AGTGTGTGTGT	A	358.28	PASS	AB=0.972;AC=16;AF=0.296;AN=54;BaseQRankSum=0.936;DP=424;FS=0.000;HRun=0;HaplotypeScore=114.9739;InbreedingCoeff=0.4347;MQ=64.90;MQ0=10;MQRankSum=-1.073;QD=2.44;ReadPosRankSum=0.763;VQSLOD=1.9174;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:23:15.05:0,15,604	1/1:4,0:5:3:30,3,0	0/0:21,0:15:0:0,0,0	./.	0/0:12,0:14:15.05:0,15,403	0/0:6,0:6:6.02:0,6,91	0/1:25,0:25:66.03:66,0,272	1/1:17,0:17:2.98:21,3,0	0/0:14,0:15:18.05:0,18,285	0/0:15,0:15:6.22:0,6,93	0/0:13,0:13:9.03:0,9,135	0/0:6,0:6:3.01:0,3,77	0/0:7,0:7:9.01:0,9,150	0/0:9,0:7:9.03:0,9,237	0/0:13,0:14:24.07:0,24,545	0/0:13,0:13:15.05:0,15,389	0/1:16,0:17:9.41:9,0,171	0/0:24,0:24:30.10:0,30,1184	1/1:19,0:19:3.01:46,3,0	1/1:9,3:12:3.01:83,3,0	1/1:27,0:26:3:86,3,0	0/0:7,0:7:6:0,6,104	0/0:8,0:7:6.02:0,6,155	0/0:18,0:19:24.08:0,24,664	0/0:16,0:16:15.05:0,15,374	0/0:11,0:11:1.82:0,2,5	1/1:12,0:11:2.85:86,3,0	1/1:9,4:13:2.79:78,3,0
chr10	87091765	.	CTAAA	C	3437.31	PASS	AB=0.947;AC=23;AF=0.426;AN=54;BaseQRankSum=8.026;DP=294;FS=1.405;HRun=0;HaplotypeScore=51.0093;InbreedingCoeff=0.7261;MQ=76.25;MQ0=3;MQRankSum=0.333;QD=22.03;ReadPosRankSum=-2.256;VQSLOD=2.9949;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:36.12:0,36,830	1/1:2,3:6:9.02:125,9,0	0/0:10,1:8:0.73:0,1,2	0/0:14,0:8:3.01:0,3,55	0/0:14,0:14:24.08:0,24,573	0/1:17,1:18:3.15:3,0,962	0/0:4,0:4:6.02:0,6,144	1/1:17,9:26:27.09:417,27,0	0/0:10,0:10:9.03:0,9,201	1/1:2,5:7:15.05:241,15,0	1/1:5,2:7:6.02:97,6,0	0/0:6,0:6:9.03:0,9,217	0/0:9,0:9:9.03:0,9,217	0/0:2,0:2:3.01:0,3,72	0/0:7,0:7:12.04:0,12,289	0/0:4,0:4:6.02:0,6,145	1/1:14,7:21:30.10:475,30,0	0/0:8,0:9:15.05:0,15,257	1/1:7,4:12:15.02:196,15,0	1/1:1,7:8:21.07:338,21,0	1/1:3,1:4:3.01:48,3,0	./.	0/0:9,0:9:12.04:0,12,289	0/0:5,0:5:3.01:0,3,72	0/0:10,0:10:12.03:0,12,242	1/1:4,9:13:24.08:386,24,0	1/1:10,12:22:33.11:531,33,0	1/1:0,12:12:36.12:580,36,0
chr10	87091870	.	TA	T	1027.09	PASS	AB=0.821;AC=28;AF=0.500;AN=56;BaseQRankSum=3.112;DP=348;FS=9.415;HRun=15;HaplotypeScore=47.4024;InbreedingCoeff=0.6525;MQ=76.46;MQ0=5;MQRankSum=-0.513;QD=4.67;ReadPosRankSum=2.033;VQSLOD=0.7287;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,15:22:24.56:217,25,0	1/1:3,2:5:5.86:38,6,0	0/0:28,2:10:13.61:0,14,74	0/1:26,0:13:11.84:12,0,44	0/1:5,1:7:10.44:10,0,29	0/0:18,0:19:43.69:0,44,370	0/0:12,0:13:23.76:0,24,186	1/1:4,0:17:25.85:75,26,0	0/0:13,0:13:20.16:0,20,202	1/1:10,3:13:8.77:58,9,0	1/1:5,1:6:5.83:38,6,0	0/0:8,0:8:17.88:0,18,144	0/1:3,1:5:4.43:4,0,78	0/0:8,0:8:17.97:0,18,153	0/0:7,0:7:14.99:0,15,130	0/0:4,0:4:11.87:0,12,94	0/1:6,16:23:0.26:242,0,0	1/1:8,21:29:23.89:277,24,0	1/1:8,0:15:14.22:41,14,0	1/1:2,0:5:8.11:23,8,0	1/1:2,0:11:16.29:47,16,0	0/0:3,0:3:3:0,3,26	0/0:4,0:4:3:0,3,26	0/0:10,0:10:22.19:0,22,191	0/0:7,0:8:17.81:0,18,137	1/1:6,1:12:16.97:60,17,0	1/1:8,0:16:21.70:63,22,0	1/1:2,0:8:8.12:23,8,0
chr10	87092337	.	TG	T	1205.56	PASS	AB=0.914;AC=32;AF=0.615;AN=52;BaseQRankSum=0.967;DP=246;FS=11.085;HRun=11;HaplotypeScore=36.1638;InbreedingCoeff=0.1913;MQ=87.69;MQ0=1;MQRankSum=-3.007;QD=6.52;ReadPosRankSum=2.521;VQSLOD=0.3395;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,8:11:20.96:172,21,0	1/1:2,1:3:5.99:49,6,0	0/1:18,0:14:12.38:12,0,68	0/1:12,0:8:10.31:10,0,25	0/0:6,0:6:3:0,3,32	0/0:9,0:9:2.99:0,3,23	0/1:12,0:12:12.61:13,0,76	1/1:8,1:9:5.79:49,6,0	0/0:3,0:3:0:0,0,0	1/1:2,1:3:2.99:25,3,0	1/1:1,2:3:2.99:25,3,0	0/0:3,0:3:0:0,0,0	0/1:6,0:6:0.01:0,0,0	./.	0/0:10,0:10:6:0,6,57	0/1:3,1:4:18.63:19,0,26	1/1:8,18:26:59.91:489,60,0	0/1:8,6:14:6.05:145,0,6	1/1:7,1:8:2.96:25,3,0	1/1:5,0:7:2.03:6,2,0	1/1:16,5:23:19.47:133,19,0	./.	0/0:6,0:6:3.01:0,3,32	0/0:11,0:11:3:0,3,32	1/1:7,1:8:2.99:25,3,0	1/1:7,1:8:2.98:25,3,0	1/1:2,2:5:10.98:74,11,0	1/1:1,2:3:5.98:49,6,0
chr10	87092388	.	T	TG	271.98	PASS	AB=0.874;AC=4;AF=0.071;AN=56;BaseQRankSum=3.195;DP=319;FS=9.097;HRun=1;HaplotypeScore=41.0261;InbreedingCoeff=-0.1160;MQ=65.28;MQ0=21;MQRankSum=-3.731;QD=4.32;ReadPosRankSum=0.020;VQSLOD=-0.4082;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,1:17:8.68:0,9,133	0/0:2,0:2:5.99:0,6,62	0/0:31,0:10:20.94:0,21,269	0/0:35,0:21:45.22:0,45,601	0/0:8,0:6:18.04:0,18,212	0/0:9,0:9:27.06:0,27,347	0/0:15,0:15:39.13:0,39,530	0/1:14,5:18:99:177,0,430	0/0:8,0:8:24.08:0,24,322	0/0:6,0:5:0.17:0,0,89	0/0:5,0:5:8.52:0,9,89	0/0:7,0:7:21.07:0,21,288	0/0:2,0:2:3.01:0,3,40	0/0:8,0:8:21.07:0,21,288	0/0:5,0:5:15.02:0,15,189	0/0:7,0:7:18.03:0,18,227	0/0:20,1:21:14.73:0,15,315	0/1:8,4:10:69.75:147,0,70	0/1:19,1:16:43.86:44,0,322	0/0:3,0:3:6.02:0,6,80	0/0:18,1:18:11.04:0,11,316	0/0:3,0:3:9.03:0,9,120	0/0:6,0:6:18.06:0,18,244	0/0:13,0:13:39.13:0,39,528	0/0:9,0:9:27.09:0,27,364	0/1:12,0:11:8.37:8,0,313	0/0:10,0:9:16.66:0,17,273	0/0:7,0:6:8.06:0,8,155
chr10	87093481	.	C	CTGTGCAAGGCTTACACTCTGAAGGA	37566.43	PASS	AB=0.958;AC=52;AF=0.929;AN=56;BaseQRankSum=-4.013;DP=320;FS=10.253;HRun=0;HaplotypeScore=418.9960;InbreedingCoeff=-0.0801;MQ=67.78;MQ0=0;MQRankSum=-1.527;QD=117.40;ReadPosRankSum=1.306;VQSLOD=3.8071;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:41.99:2087,42,0	0/1:5,0:5:4.80:127,0,5	0/1:9,0:9:96.89:703,0,97	0/1:8,1:10:9.53:1433,0,10	1/1:13,0:13:23.89:914,24,0	1/1:9,0:9:16.56:628,17,0	1/1:14,0:16:47.53:3152,48,0	1/1:14,0:14:39.13:2388,39,0	1/1:7,0:8:16.21:825,16,0	1/1:11,0:11:25.41:1589,25,0	1/1:14,0:14:32.09:1160,32,0	0/1:13,0:13:7.65:806,0,8	1/1:7,0:8:13.79:985,14,0	1/1:11,0:12:25.40:1257,25,0	1/1:13,0:13:29.10:1173,29,0	1/1:7,0:7:18.42:809,18,0	1/1:11,0:12:27.09:1808,27,0	1/1:8,0:10:8.57:933,9,0	1/1:12,0:12:35.91:1627,36,0	1/1:13,0:13:32.68:1262,33,0	1/1:4,0:4:9.03:223,9,0	1/1:15,0:15:39.27:1455,39,0	1/1:12,0:13:36.10:1463,36,0	1/1:15,0:16:33.58:1914,34,0	1/1:15,0:15:33.43:2057,33,0	1/1:10,0:10:29.89:1751,30,0	1/1:9,0:9:4.05:1710,4,0	1/1:7,0:8:18.06:1325,18,0
chr10	87093482	.	T	TGTGCAAGGCTTACACTCTGAACC	39604.98	PASS	AB=0.897;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.951;DP=311;FS=24.444;HRun=0;HaplotypeScore=393.8387;InbreedingCoeff=-0.0960;MQ=65.35;MQ0=0;MQRankSum=-1.435;QD=127.35;ReadPosRankSum=1.865;VQSLOD=3.8599;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:44:2216,44,0	0/1:4,0:4:4.75:136,0,5	0/1:4,0:8:96.89:715,0,97	0/1:7,1:9:12.43:1189,0,12	1/1:13,0:13:34.35:1013,34,0	1/1:9,0:9:23.18:713,23,0	1/1:16,0:16:47.65:3381,48,0	1/1:14,0:14:39.13:2598,39,0	1/1:8,0:8:22.27:865,22,0	1/1:11,0:11:29.63:1709,30,0	1/1:13,0:13:36.50:1242,37,0	0/1:12,0:12:10.67:820,0,11	1/1:8,0:8:4.31:1005,4,0	1/1:11,0:11:24.96:1373,25,0	1/1:13,0:13:32.45:1323,32,0	1/1:7,0:7:20.06:934,20,0	1/1:11,0:11:27.09:1910,27,0	0/1:9,0:9:6.15:920,0,6	1/1:12,0:12:32.91:1610,33,0	1/1:13,0:13:34.69:1326,35,0	1/1:4,0:4:9.03:223,9,0	1/1:15,0:15:41.41:1608,41,0	1/1:13,0:13:36.88:1486,37,0	1/1:16,0:16:33.58:1998,34,0	1/1:15,0:15:41.02:2202,41,0	1/1:10,0:10:30.10:1901,30,0	1/1:9,0:9:12.11:1837,12,0	1/1:7,0:7:18.53:1353,19,0
chr10	87093606	.	A	AAAAC	4470	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-9.476;DP=514;FS=1.011;HRun=0;HaplotypeScore=111.9123;InbreedingCoeff=0.9806;MQ=61.22;MQ0=6;MQRankSum=-1.756;QD=34.12;ReadPosRankSum=-0.604;VQSLOD=4.8357;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.06:0,63,873	0/0:10,0:10:15.02:0,15,216	0/0:18,0:15:24.02:0,24,282	0/0:20,0:16:14.79:0,15,129	0/0:21,0:21:39.60:0,40,625	0/0:22,0:22:39.13:0,39,624	0/0:27,0:27:45.08:0,45,635	1/1:5,8:14:24.08:434,24,0	0/0:11,0:11:33.10:0,33,508	0/0:27,0:27:57.16:0,57,858	0/0:11,0:10:27.05:0,27,411	0/0:15,0:15:33.07:0,33,506	0/0:15,0:15:45.06:0,45,642	0/0:15,0:15:36.11:0,36,553	0/0:13,0:13:30.09:0,30,457	0/0:13,0:13:36.11:0,36,564	0/0:28,0:28:75.14:0,75,1105	0/0:13,0:13:36.03:0,36,498	1/1:12,9:21:36.07:758,36,0	1/1:13,8:20:32.83:726,33,0	1/1:2,10:11:12.04:289,12,0	0/0:18,0:18:30.02:0,30,430	0/0:13,0:12:21.05:0,21,290	0/0:29,0:29:72.16:0,72,1048	0/0:21,0:21:45.10:0,45,673	1/1:21,10:31:69.04:1155,69,0	1/1:11,7:18:42.10:819,42,0	1/1:4,8:13:12.04:289,12,0
chr10	87094062	.	CT	C	4592.88	PASS	AB=0.832;AC=19;AF=0.339;AN=56;BaseQRankSum=11.254;DP=627;FS=9.047;HRun=10;HaplotypeScore=67.5621;InbreedingCoeff=0.7335;MQ=74.66;MQ0=0;MQRankSum=-0.778;QD=17.66;ReadPosRankSum=2.011;VQSLOD=5.4309;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,48:50:99:1146,132,0	0/0:5,0:5:9.02:0,9,100	0/1:17,2:18:10.32:10,0,239	0/1:16,0:15:17.80:18,0,95	0/0:16,0:16:36.08:0,36,390	0/0:27,3:31:5.09:0,5,756	0/0:22,0:21:45.11:0,45,488	1/1:6,17:23:50.97:443,51,0	0/0:25,0:25:75.19:0,75,818	0/0:29,0:30:59.98:0,60,635	0/0:15,0:15:36.06:0,36,385	0/0:22,0:22:63.14:0,63,684	0/0:20,1:21:19.03:0,19,414	0/0:20,0:20:54.13:0,54,590	0/0:23,2:26:10.16:0,10,599	0/0:21,2:23:15.65:0,16,597	0/0:16,0:16:42.11:0,42,465	1/1:2,15:17:41.99:365,42,0	1/1:3,19:22:56.97:495,57,0	1/1:1,17:19:41.01:344,41,0	1/1:2,18:20:44.99:391,45,0	0/0:24,1:25:46.13:0,46,730	0/0:20,0:20:51.13:0,51,557	0/0:28,1:29:52.10:0,52,780	0/0:21,0:21:54.13:0,54,582	0/1:8,18:26:39.58:379,0,40	1/1:6,30:39:93.06:773,93,0	1/1:1,8:9:26.97:230,27,0
chr10	87094469	.	AC	A	818.25	PASS	AB=0.952;AC=13;AF=0.232;AN=56;BaseQRankSum=5.911;DP=379;FS=1.127;HRun=10;HaplotypeScore=57.4022;InbreedingCoeff=0.2115;MQ=82.27;MQ0=0;MQRankSum=0.009;QD=5.08;ReadPosRankSum=2.475;VQSLOD=0.5134;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,20:27:49.96:422,50,0	0/0:1,0:2:5.89:0,6,37	0/1:17,0:18:11.34:11,0,181	0/1:13,1:15:24.64:25,0,169	0/0:12,0:12:21.05:0,21,224	0/0:12,1:13:1.06:0,1,239	0/0:24,1:25:34.11:0,34,586	0/1:8,0:8:19.65:20,0,27	0/0:23,0:23:57.13:0,57,613	0/0:4,0:6:5.85:0,6,47	0/0:5,0:4:3:0,3,25	1/1:6,12:18:14.79:352,15,0	0/0:18,0:18:42.11:0,42,457	0/0:15,0:15:42.05:0,42,448	0/0:19,0:19:53.92:0,54,539	0/0:15,0:15:39.09:0,39,423	0/0:6,0:6:11.87:0,12,114	1/1:2,0:20:32.59:96,33,0	0/1:9,0:9:6.92:7,0,101	0/0:3,0:3:3.01:0,3,33	0/0:20,1:21:13.05:0,13,372	0/0:13,0:13:27.06:0,27,290	0/1:11,1:12:24.74:25,0,205	0/1:20,3:23:17.99:18,0,504	0/1:10,1:11:5.01:5,0,171	0/0:8,0:9:11.83:0,12,101	0/0:10,0:10:27.02:0,27,265	0/0:2,0:3:6.02:0,6,66
chr10	87096087	.	C	CT	5474.41	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-13.962;DP=660;FS=2.968;HRun=5;HaplotypeScore=65.0217;InbreedingCoeff=0.9893;MQ=93.50;MQ0=0;MQRankSum=-5.071;QD=33.38;ReadPosRankSum=-2.327;VQSLOD=4.5470;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.12:0,90,949	0/0:16,0:16:42.10:0,42,451	0/0:31,0:31:69.12:0,69,704	0/0:29,0:29:57.96:0,58,683	0/0:25,0:25:72.18:0,72,773	0/0:19,0:19:57.14:0,57,612	0/0:25,0:25:69.14:0,69,725	1/1:3,29:32:87.23:1077,87,0	0/0:25,0:25:69.16:0,69,733	0/0:23,0:23:63.15:0,63,672	0/0:23,0:23:63.09:0,63,648	0/0:19,0:19:54.14:0,54,580	0/0:18,0:18:54.11:0,54,570	0/0:20,0:20:57.14:0,57,612	0/0:21,0:21:54.11:0,54,570	0/0:29,0:29:81.17:0,81,855	0/0:20,0:20:51.13:0,51,548	0/0:19,0:19:51.13:0,51,548	1/1:1,17:18:51.17:668,51,0	1/1:0,24:24:66.06:808,66,0	1/1:1,31:32:84.27:1105,84,0	0/0:28,0:28:69.15:0,69,797	0/0:18,0:18:54.11:0,54,568	0/0:25,0:25:72.18:0,72,774	0/0:31,0:31:90.23:0,90,967	1/1:3,21:24:33.97:795,34,0	1/1:0,27:28:69.22:903,69,0	1/1:3,3:6:9.03:118,9,0
chr10	87097869	.	AT	A	2707.15	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.372;DP=464;FS=24.317;HRun=7;HaplotypeScore=63.9359;InbreedingCoeff=0.9682;MQ=87.19;MQ0=3;MQRankSum=0.721;QD=23.54;ReadPosRankSum=0.727;VQSLOD=2.0152;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.21:0,75,912	0/0:10,0:10:30.04:0,30,345	0/0:35,1:20:35.39:0,35,346	0/0:33,0:26:4.55:0,5,133	0/0:9,0:9:24.08:0,24,302	0/0:17,0:17:48.15:0,48,603	0/0:13,0:13:39.08:0,39,472	1/1:2,20:22:56.96:581,57,0	0/0:11,0:11:33.11:0,33,415	0/0:21,0:21:57.18:0,57,706	0/0:13,0:13:36.11:0,36,441	0/0:5,0:5:12.04:0,12,151	0/0:18,0:18:54.17:0,54,679	0/0:14,0:14:39.12:0,39,490	0/0:12,0:12:30.09:0,30,365	0/0:10,0:10:30.09:0,30,366	0/0:23,0:23:60.19:0,60,753	0/0:26,0:26:75.22:0,75,927	1/1:3,20:23:60.13:611,60,0	1/1:1,12:13:36.08:367,36,0	1/1:1,12:13:30.07:306,30,0	0/0:9,0:9:24.07:0,24,291	0/0:10,0:10:30.10:0,30,377	0/0:15,0:15:39.12:0,39,482	0/0:13,0:13:36.10:0,36,430	1/1:2,17:19:51.03:520,51,0	1/1:3,11:14:27.06:275,27,0	1/1:1,10:11:24.05:245,24,0
chr10	87100501	.	T	TG	3940.27	PASS	AB=0.682;AC=25;AF=0.446;AN=56;BaseQRankSum=3.449;DP=412;FS=1.872;HRun=8;HaplotypeScore=49.2802;InbreedingCoeff=0.8703;MQ=85.86;MQ0=0;MQRankSum=-3.270;QD=22.01;ReadPosRankSum=-1.156;VQSLOD=3.2269;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:8,1:15:4.81:10,0,5	1/1:1,3:4:9.03:104,9,0	0/0:16,0:16:38.95:0,39,353	0/0:15,0:15:2.12:0,2,232	0/0:5,0:5:12.01:0,12,110	0/0:27,0:27:58.05:0,58,611	0/0:21,0:21:50.98:0,51,456	1/1:4,11:15:33.02:343,33,0	0/0:20,0:20:59.96:0,60,532	1/1:4,4:8:12.04:138,12,0	1/1:0,4:4:12.04:138,12,0	0/0:16,0:16:39.01:0,39,357	0/0:16,0:16:48.01:0,48,434	0/0:21,0:21:44.99:0,45,407	0/0:19,0:19:48.01:0,48,439	0/0:12,0:12:36.02:0,36,330	1/1:4,20:24:48.13:546,48,0	1/1:6,2:25:45.99:286,46,0	1/1:1,12:13:33.09:370,33,0	1/1:1,2:3:6.02:69,6,0	1/1:2,24:26:41.74:734,42,0	0/0:8,0:8:15:0,15,137	0/0:7,0:7:14.99:0,15,132	0/0:27,0:27:81.03:0,81,736	0/0:3,0:3:9:0,9,82	1/1:3,12:15:36.11:415,36,0	1/1:3,19:22:57.16:649,57,0	1/1:1,4:5:12.03:136,12,0
chr10	87101095	.	CA	C	431.57	PASS	AB=0.807;AC=6;AF=0.107;AN=56;BaseQRankSum=1.991;DP=303;FS=3.195;HRun=15;HaplotypeScore=44.2628;InbreedingCoeff=0.3454;MQ=77.49;MQ0=3;MQRankSum=0.615;QD=6.25;ReadPosRankSum=4.046;VQSLOD=2.1413;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,15:27:23.36:273,23,0	0/0:2,0:2:0:0,0,0	0/0:16,0:9:8.83:0,9,60	0/0:22,0:16:13.29:0,13,98	0/0:4,0:6:8.87:0,9,68	0/0:14,0:14:29.81:0,30,243	0/0:13,0:13:23.89:0,24,191	0/1:7,1:9:17.71:18,0,95	0/0:11,1:12:2.17:0,2,129	0/0:9,0:9:11.98:0,12,101	0/0:6,0:6:5.99:0,6,51	0/0:12,0:12:0.14:0,0,109	0/0:3,0:3:2.99:0,3,23	0/0:14,0:14:20.94:0,21,172	0/0:7,0:7:15:0,15,132	0/0:3,0:3:6:0,6,53	0/0:20,3:23:5.08:0,5,384	1/1:3,22:28:21.17:241,21,0	0/0:9,0:9:14.98:0,15,127	0/1:3,2:5:10.15:29,0,10	0/0:11,0:11:23.96:0,24,200	0/0:1,0:1:2.99:0,3,24	0/0:1,0:1:3:0,3,26	0/0:9,0:9:20.99:0,21,181	0/0:10,0:10:9.30:0,9,59	0/0:10,0:10:5.97:0,6,118	0/0:12,0:12:17.84:0,18,137	0/0:7,0:7:14.98:0,15,128
chr10	87101207	.	G	GC	1646.14	PASS	AB=0.600;AC=13;AF=0.241;AN=54;BaseQRankSum=-6.040;DP=372;FS=0.548;HRun=8;HaplotypeScore=43.3932;InbreedingCoeff=0.8152;MQ=79.93;MQ0=0;MQRankSum=0.625;QD=21.66;ReadPosRankSum=-3.296;VQSLOD=2.2773;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:87.02:0,87,790	0/0:2,0:2:3:0,3,27	0/0:14,0:14:17.70:0,18,210	0/0:12,0:12:12.10:0,12,150	0/0:5,0:5:14.99:0,15,131	0/0:15,0:15:35.98:0,36,324	0/0:33,0:33:93:0,93,840	1/1:2,11:13:30.06:332,30,0	0/0:8,0:8:21.01:0,21,192	0/0:9,0:9:18:0,18,164	0/0:6,0:6:15.01:0,15,136	0/0:14,0:14:39.02:0,39,357	0/0:9,0:9:27:0,27,242	0/0:18,0:18:51.01:0,51,462	0/0:13,0:13:36.01:0,36,329	0/0:8,0:8:24.01:0,24,220	0/0:26,0:26:72.02:0,72,654	0/0:32,0:32:87.04:0,87,796	1/1:2,10:13:33.08:370,33,0	1/1:0,2:2:5.97:52,6,0	1/1:4,15:19:39.12:450,39,0	0/0:2,0:2:6:0,6,55	./.	0/0:23,0:23:54.02:0,54,494	0/0:10,0:10:21:0,21,192	0/1:2,4:6:12.45:104,0,12	1/1:2,10:11:27.08:312,27,0	1/1:5,6:11:18.05:208,18,0
chr10	87101445	.	TC	T	4898.14	PASS	AB=0.912;AC=54;AF=0.964;AN=56;BaseQRankSum=0.033;DP=345;FS=4.456;HRun=10;HaplotypeScore=137.3552;InbreedingCoeff=-0.0301;MQ=60.98;MQ0=0;MQRankSum=-2.753;QD=14.20;ReadPosRankSum=2.993;VQSLOD=3.9805;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,16:21:29.75:260,30,0	1/1:0,1:1:3:26,3,0	0/1:11,1:9:13.64:14,0,70	0/1:8,1:9:13.53:14,0,73	1/1:6,9:15:2.63:26,3,0	1/1:1,7:8:21:182,21,0	1/1:7,31:38:65.74:572,66,0	1/1:6,10:16:29.77:260,30,0	1/1:2,9:11:26.99:234,27,0	1/1:4,8:12:23.89:208,24,0	1/1:1,4:5:2.86:26,3,0	1/1:3,17:20:50.93:434,51,0	1/1:4,9:13:26.61:234,27,0	1/1:2,10:12:29.99:260,30,0	1/1:5,12:17:32.59:286,33,0	1/1:4,10:14:29.60:260,30,0	1/1:5,12:17:27.21:234,27,0	1/1:3,7:10:20.94:182,21,0	1/1:3,7:10:20.99:182,21,0	1/1:1,2:3:5.58:52,6,0	1/1:5,12:17:14.64:123,15,0	1/1:0,8:8:14.84:130,15,0	1/1:3,2:5:2.69:26,3,0	1/1:7,9:16:9:78,9,0	1/1:3,10:13:23.92:208,24,0	1/1:4,7:11:20.74:182,21,0	1/1:1,3:4:8.68:78,9,0	1/1:1,6:7:15.46:131,15,0
chr10	87101638	.	CCTCTCTCTCTCT	C	791.71	PASS	AC=12;AF=0.375;AN=32;BaseQRankSum=4.820;DP=376;FS=2.534;HRun=0;HaplotypeScore=131.8317;InbreedingCoeff=0.6467;MQ=64.15;MQ0=14;MQRankSum=-4.345;QD=11.47;ReadPosRankSum=-0.383;VQSLOD=2.5323;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:13:2.04:0,2,6	1/1:6,0:8:9.03:230,9,0	./.	./.	./.	./.	0/0:13,0:12:9.50:0,10,316	./.	0/0:17,0:17:6.02:0,6,248	1/1:9,0:12:6.02:148,6,0	./.	0/0:14,0:14:11.97:0,12,184	0/0:10,0:9:9.29:0,9,288	0/0:12,0:14:12.04:0,12,331	0/0:18,0:18:12.02:0,12,445	0/0:14,0:14:15.05:0,15,624	./.	1/1:8,1:10:6.02:165,6,0	./.	./.	./.	./.	0/0:13,0:13:3.01:0,3,145	0/0:24,0:21:18.95:0,19,757	./.	1/1:17,1:17:3.01:101,3,0	1/1:10,1:12:6.02:174,6,0	1/1:7,2:7:3.01:100,3,0
chr10	87101691	.	C	CTGTGTGTGTGTGTG	1837.72	PASS	AB=1.000;AC=22;AF=0.407;AN=54;BaseQRankSum=7.144;DP=354;FS=6.699;HRun=0;HaplotypeScore=111.2807;InbreedingCoeff=0.6171;MQ=41.14;MQ0=51;MQRankSum=-7.796;QD=15.31;ReadPosRankSum=1.574;VQSLOD=1.2397;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:13:2.90:90,3,0	1/1:11,0:10:6.17:32,6,0	0/0:16,0:4:11.91:0,12,217	0/0:19,0:4:9.02:0,9,91	0/0:8,0:7:6.02:0,6,186	0/0:13,0:10:12.04:0,12,423	0/0:25,0:23:10.58:0,11,823	0/1:9,0:6:39.45:39,0,66	0/0:14,0:14:39.07:0,39,1388	1/1:11,0:9:14.06:284,14,0	./.	0/0:15,0:15:22.26:0,22,1282	0/0:17,0:16:19.25:0,19,1196	0/0:12,0:12:12.51:0,13,777	0/0:21,0:19:46.36:0,46,1380	0/0:14,0:13:33.13:0,33,964	1/1:16,0:12:17.85:327,18,0	1/1:5,3:7:9.03:311,9,0	0/1:13,0:9:42.66:140,0,43	1/1:5,0:5:3.01:36,3,0	1/1:12,0:9:0.89:2,1,0	0/0:7,0:5:6.02:0,6,252	0/0:8,0:7:12.01:0,12,273	0/0:32,0:26:0.08:0,0,1343	0/0:8,0:7:12.03:0,12,409	1/1:8,0:6:18.05:371,18,0	1/1:3,0:3:9.03:219,9,0	1/1:8,0:5:12.04:171,12,0
chr10	87101716	.	TAC	T	104.08	PASS	AB=0.915;AC=6;AF=0.107;AN=56;BaseQRankSum=6.211;DP=471;FS=13.607;HRun=0;HaplotypeScore=85.5378;InbreedingCoeff=-0.1324;MQ=62.12;MQ0=28;MQRankSum=-5.830;QD=1.47;ReadPosRankSum=-3.074;VQSLOD=0.0904;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:29.37:0,29,481	0/1:6,1:6:1.76:2,0,52	0/0:40,0:23:69.16:0,69,1134	0/0:38,0:17:42.14:0,42,762	0/0:11,0:11:12.04:0,12,212	0/0:15,0:14:24.05:0,24,386	0/0:25,0:24:51.13:0,51,867	0/0:17,0:14:19.06:0,19,666	0/0:18,0:18:54.17:0,54,957	0/1:18,1:17:20.67:21,0,514	0/0:6,0:6:5.92:0,6,97	0/0:24,0:24:66.22:0,66,1124	0/0:14,0:14:39.10:0,39,632	0/0:16,1:17:13.16:0,13,643	0/0:22,1:22:57.05:0,57,1017	0/0:10,0:10:30.09:0,30,536	0/0:17,0:14:5.22:0,5,320	0/0:15,0:14:7.11:0,7,405	0/1:8,5:12:89.19:89,0,316	0/1:9,0:9:5.67:6,0,176	0/0:13,1:12:20.73:0,21,354	0/0:14,0:13:27.09:0,27,453	0/0:9,0:9:15.28:0,15,313	0/0:32,0:30:28.46:0,28,1050	0/0:10,0:10:27.09:0,27,491	0/1:15,1:14:39.48:39,0,529	0/0:9,0:9:1.68:0,2,243	0/1:7,0:7:59.92:60,0,77
chr10	87101906	.	C	CTCT	1704.32	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.524;DP=623;FS=0.000;HRun=0;HaplotypeScore=109.3018;InbreedingCoeff=0.8538;MQ=54.03;MQ0=9;MQRankSum=3.795;QD=22.43;ReadPosRankSum=2.646;VQSLOD=3.6108;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,45:55:67.78:1392,68,0	0/0:16,0:15:35.62:0,36,390	0/0:38,0:16:30.13:0,30,372	0/0:41,0:12:25.10:0,25,309	0/0:14,0:14:39.06:0,39,466	0/0:18,0:18:39.11:0,39,547	0/0:20,0:20:48.13:0,48,664	0/0:25,0:25:41.84:0,42,386	0/0:26,0:26:54.08:0,54,697	0/0:18,0:18:45.11:0,45,572	0/0:12,0:12:30.07:0,30,395	0/0:19,0:19:45.12:0,45,635	0/0:21,0:21:53.88:0,54,762	0/0:17,0:17:45.11:0,45,611	0/0:32,0:32:81.20:0,81,1098	0/0:23,0:22:57.08:0,57,744	0/0:15,0:15:41.98:0,42,543	1/1:6,15:21:1.11:419,1,0	0/0:25,0:24:49.82:0,50,579	0/0:6,0:6:14.56:0,15,224	0/0:43,0:43:90.05:0,90,1208	0/0:19,0:19:45.13:0,45,654	0/0:9,0:9:21.06:0,21,295	0/0:34,0:34:90.18:0,90,1167	0/0:7,0:7:19.88:0,20,275	0/0:19,0:18:36.05:0,36,474	0/0:19,0:19:48.06:0,48,629	0/0:11,0:11:30.06:0,30,425
chr10	87103082	.	AC	A	2393.68	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.774;DP=586;FS=7.861;HRun=9;HaplotypeScore=79.2859;InbreedingCoeff=0.9279;MQ=76.46;MQ0=2;MQRankSum=-2.111;QD=21.00;ReadPosRankSum=2.783;VQSLOD=4.2606;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,46:48:99:1098,120,0	1/1:1,6:7:15.01:137,15,0	0/0:26,0:21:38.67:0,39,366	0/0:27,0:19:23.05:0,23,233	0/0:13,0:13:36.09:0,36,406	0/0:10,0:10:30.04:0,30,321	0/0:33,1:34:56.23:0,56,858	0/0:28,0:28:57.15:0,57,641	0/0:20,0:20:44.96:0,45,483	1/1:0,15:15:42.02:384,42,0	1/1:1,10:11:27:247,27,0	0/0:13,0:13:36.09:0,36,406	0/0:15,0:15:39.10:0,39,440	0/0:13,1:14:8.64:0,9,352	0/0:30,0:30:81.70:0,82,926	0/0:26,0:25:72.16:0,72,807	1/1:0,19:18:48.03:439,48,0	1/1:2,12:14:1.22:267,1,0	0/0:13,1:14:11.63:0,12,379	0/0:24,0:23:54.15:0,54,610	0/0:31,0:31:81.23:0,81,925	0/0:22,0:22:60.15:0,60,672	0/0:18,0:18:45.10:0,45,498	0/0:38,0:37:99:0,99,1143	0/0:18,0:18:39.09:0,39,431	0/0:24,0:24:57.16:0,57,650	0/0:17,1:18:19.77:0,20,449	0/0:8,0:8:24.06:0,24,266
chr10	87103113	.	TAC	T	1815.25	PASS	AB=0.929;AC=22;AF=0.423;AN=52;BaseQRankSum=3.926;DP=682;FS=0.000;HRun=0;HaplotypeScore=110.4383;InbreedingCoeff=0.1049;MQ=54.69;MQ0=13;MQRankSum=0.894;QD=4.42;ReadPosRankSum=-0.816;VQSLOD=2.4851;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:58:71.13:0,71,656	0/1:8,0:10:4.35:4,0,44	./.	./.	0/1:17,2:18:79.18:79,0,157	0/0:18,0:17:18.06:0,18,267	0/1:28,1:29:19.68:20,0,545	1/1:17,4:21:14.82:147,15,0	0/0:15,0:15:21.07:0,21,320	0/1:21,0:23:6.17:6,0,276	0/1:11,0:14:12.23:12,0,177	0/0:17,0:17:33.11:0,33,474	0/0:25,0:24:41.97:0,42,520	0/1:16,1:17:20.28:20,0,311	0/1:34,4:37:56.92:57,0,856	0/1:30,1:31:33.60:34,0,686	0/1:23,1:26:19.86:20,0,225	0/0:20,0:21:15.89:0,16,299	1/1:11,2:12:16.41:143,16,0	1/1:8,9:16:18.05:203,18,0	0/1:33,8:40:11.52:365,0,12	0/0:26,0:26:45.12:0,45,654	0/0:24,0:23:30.10:0,30,452	0/1:38,2:41:93.78:94,0,652	0/0:23,0:23:48.01:0,48,640	0/1:25,10:33:5.51:296,0,6	1/1:11,6:21:16.35:312,16,0	1/1:4,5:10:20.64:181,21,0
chr10	87103657	.	A	AG	11576.78	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-15.506;DP=617;FS=8.559;HRun=4;HaplotypeScore=56.9101;InbreedingCoeff=0.9999;MQ=75.97;MQ0=0;MQRankSum=-3.106;QD=36.87;ReadPosRankSum=-0.326;VQSLOD=4.5863;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:34:87.29:1189,87,0	1/1:2,15:17:41.97:574,42,0	0/0:19,0:19:45.12:0,45,511	0/0:17,0:17:45.12:0,45,496	0/0:29,0:29:84.22:0,84,943	0/0:17,0:17:51.13:0,51,569	0/0:19,0:19:54.15:0,54,613	1/1:1,15:16:45.14:599,45,0	0/0:15,0:15:42.12:0,42,476	1/1:1,20:21:60.20:820,60,0	1/1:0,27:27:72.24:979,72,0	0/0:18,0:18:48.11:0,48,527	0/0:18,0:18:48.14:0,48,545	0/0:20,0:20:60.17:0,60,680	0/0:19,0:19:54.15:0,54,613	0/0:19,0:19:54.14:0,54,603	1/1:3,22:25:69.23:943,69,0	1/1:1,32:32:93.24:1246,93,0	1/1:2,12:14:33.08:432,33,0	1/1:2,26:28:75.25:1023,75,0	1/1:0,29:29:84.28:1149,84,0	0/0:28,0:28:78.22:0,78,885	0/0:21,0:21:63.18:0,63,714	0/0:20,0:20:57.15:0,57,639	0/0:24,0:24:69.19:0,69,776	1/1:0,19:19:57.17:761,57,0	1/1:1,31:31:93.24:1245,93,0	1/1:1,17:18:45.15:615,45,0
chr10	87103934	.	GAAA	G	2649.58	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=4.810;DP=586;FS=2.589;HRun=15;HaplotypeScore=96.1108;InbreedingCoeff=0.9797;MQ=71.58;MQ0=2;MQRankSum=-1.244;QD=18.53;ReadPosRankSum=4.387;VQSLOD=3.0992;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:23:39.13:0,39,561	0/0:14,0:14:27.08:0,27,461	0/0:39,0:26:36.91:0,37,430	0/0:15,0:13:6.94:0,7,142	0/0:33,1:36:56.55:0,57,1254	0/0:17,0:19:39.08:0,39,557	0/0:18,0:20:57.18:0,57,965	1/1:8,14:22:41.90:458,42,0	0/0:18,0:18:39.10:0,39,626	0/0:14,0:19:36.03:0,36,464	0/0:23,0:23:63.17:0,63,1030	0/0:24,0:25:63.21:0,63,1096	0/0:16,0:19:51.14:0,51,823	0/0:15,0:16:39.09:0,39,587	0/0:14,0:20:37.35:0,37,568	0/0:21,0:22:57.16:0,57,951	0/0:18,0:21:53.22:0,53,758	0/0:4,0:9:24.07:0,24,319	1/1:2,6:9:16.37:171,16,0	1/1:7,19:29:45.78:454,46,0	1/1:4,11:16:17.93:186,18,0	0/0:19,0:24:66.13:0,66,998	0/0:18,0:20:54.15:0,54,873	0/0:11,0:12:33.07:0,33,519	0/0:22,0:25:57.13:0,57,872	1/1:8,14:22:44.24:471,44,0	1/1:4,23:31:69.96:738,70,0	1/1:2,12:14:33.01:370,33,0
chr10	87107079	.	TG	T	1707.24	PASS	AB=0.782;AC=10;AF=0.179;AN=56;BaseQRankSum=11.035;DP=928;FS=21.351;HRun=2;HaplotypeScore=107.8255;InbreedingCoeff=0.6838;MQ=49.86;MQ0=56;MQRankSum=-1.631;QD=14.23;ReadPosRankSum=-3.338;VQSLOD=1.3030;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:27,14:36:99:366,0,353	1/1:0,7:7:12.04:156,12,0	0/0:14,2:2:6.02:0,6,87	0/0:13,1:1:3.01:0,3,37	0/0:23,0:21:63.21:0,63,942	0/0:19,0:19:54.14:0,54,784	0/0:47,0:29:72.19:0,72,1079	0/0:32,0:13:39.13:0,39,579	0/0:45,0:44:99:0,114,1683	1/1:1,23:23:63.19:804,63,0	1/1:3,15:17:15.05:195,15,0	0/0:60,0:60:99:0,169,2457	0/0:56,0:56:99:0,144,2087	0/0:45,0:43:99:0,123,1806	0/0:65,0:65:99:0,177,2572	0/0:55,0:54:99:0,150,2222	1/1:0,12:11:16.37:231,16,0	0/1:14,4:18:99:120,0,268	0/0:23,0:14:42.14:0,42,629	0/0:22,0:22:42.09:0,42,629	0/0:90,0:81:99:0,121,1605	0/0:32,0:29:78.22:0,78,1144	0/0:30,0:27:75.24:0,75,1085	0/0:39,0:38:99:0,108,1575	0/0:36,0:35:90.26:0,90,1324	0/0:34,0:27:63.21:0,63,942	0/0:14,0:13:15.05:0,15,226	0/0:11,0:10:18.02:0,18,227
chr10	87107870	.	TG	T	141.22	PASS	AB=0.550;AC=7;AF=0.146;AN=48;BaseQRankSum=3.479;DP=828;FS=3.575;HRun=2;HaplotypeScore=101.3446;InbreedingCoeff=0.5588;MQ=52.69;MQ0=53;MQRankSum=-4.767;QD=3.62;ReadPosRankSum=-1.138;VQSLOD=0.0659;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,3:23:36.12:0,36,538	1/1:1,7:4:3.01:39,3,0	0/0:21,0:7:18.05:0,18,241	0/0:19,0:7:18.06:0,18,252	0/0:35,0:35:93.27:0,93,1352	0/0:26,0:26:57.18:0,57,824	0/0:28,0:28:75.25:0,75,1107	0/0:17,0:1:3.01:0,3,45	0/0:66,0:66:99:0,171,2507	0/0:16,1:10:4.20:0,4,326	0/0:6,1:2:0:0,0,0	0/0:69,0:69:99:0,159,2324	0/0:60,0:60:99:0,144,2117	0/0:60,1:58:99:0,144,2075	0/0:77,0:77:99:0,178,2614	0/0:63,0:62:99:0,147,2178	./.	0/0:9,0:9:17.81:0,18,261	1/1:4,4:2:6.02:78,6,0	./.	./.	0/0:44,0:43:99:0,99,1422	0/0:33,0:33:69.23:0,69,1033	0/0:46,0:46:99:0,117,1724	0/0:34,0:33:72.10:0,72,1078	0/1:2,9:4:32.90:101,0,33	1/1:1,11:3:3.01:39,3,0	./.
chr10	87107891	.	TG	T	224.56	PASS	AB=0.855;AC=2;AF=0.038;AN=52;BaseQRankSum=4.060;DP=909;FS=6.689;HRun=2;HaplotypeScore=98.5685;InbreedingCoeff=0.0603;MQ=49.23;MQ0=102;MQRankSum=-4.781;QD=3.74;ReadPosRankSum=0.700;VQSLOD=0.3159;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:36:51.13:0,51,738	0/0:7,3:4:2.85:0,3,44	0/0:20,0:7:17.72:0,18,212	0/1:18,1:7:20.92:21,0,184	0/0:33,0:31:81.21:0,81,1166	0/0:22,0:22:45.15:0,45,675	0/0:30,0:23:54.14:0,54,783	0/0:13,0:2:3.01:0,3,45	0/0:65,0:65:99:0,147,2202	0/1:28,13:22:99:290,0,433	0/0:7,5:5:0:0,0,0	0/0:68,0:66:99:0,138,2068	0/0:56,0:55:99:0,117,1745	0/0:60,0:59:99:0,126,1888	0/0:67,0:67:99:0,160,2383	0/0:64,0:63:99:0,132,1939	0/0:6,0:4:8.99:0,9,110	0/0:12,0:11:23.83:0,24,359	0/0:14,0:4:9.03:0,9,134	./.	0/0:32,0:12:3.01:0,3,46	0/0:41,0:37:72.24:0,72,1077	0/0:30,0:30:72.24:0,72,1078	0/0:42,0:42:81.09:0,81,1214	0/0:29,0:28:57.17:0,57,817	0/0:24,0:11:24.08:0,24,359	0/0:25,0:12:6.02:0,6,90	./.
chr10	87110242	.	A	AGTGT	671.50	PASS	AB=0.885;AC=21;AF=0.420;AN=50;BaseQRankSum=0.287;DP=715;FS=1.747;HRun=0;HaplotypeScore=133.0286;InbreedingCoeff=0.2814;MQ=69.02;MQ0=12;MQRankSum=-1.710;QD=1.73;ReadPosRankSum=-3.133;VQSLOD=1.7269;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:12.03:0,12,180	0/0:5,0:9:12.01:0,12,112	./.	./.	0/1:13,0:14:24.65:25,0,47	0/0:10,0:10:6.49:0,6,93	0/0:39,0:42:20.99:0,21,260	1/1:29,0:29:11.93:102,12,0	1/1:18,8:30:5.75:82,6,0	0/0:16,0:19:9.01:0,9,84	0/0:7,0:10:3:0,3,28	./.	0/0:30,0:30:9.16:0,9,104	1/1:28,0:28:2.94:41,3,0	0/0:31,0:32:15:0,15,170	0/1:23,0:26:2.81:3,0,282	0/0:19,0:27:18.02:0,18,167	1/1:16,1:31:7.57:87,8,0	1/1:22,0:25:6.64:55,7,0	1/1:14,0:21:8.23:37,8,0	0/1:63,0:64:17.61:220,0,18	0/0:18,0:18:6.01:0,6,89	0/0:10,0:10:9.03:0,9,139	0/1:23,0:37:31.73:32,0,57	0/1:15,0:17:15.92:16,0,65	1/1:30,0:31:13.56:121,14,0	0/1:20,0:28:9.95:10,0,103	0/1:5,0:8:7.46:7,0,35
chr10	87110644	.	A	ACCAGAGAGTGGTTCCAACTT	20566.89	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-0.058;DP=610;FS=17.995;HRun=0;HaplotypeScore=291.1170;InbreedingCoeff=0.9863;MQ=77.34;MQ0=0;MQRankSum=-14.022;QD=143.82;ReadPosRankSum=-0.398;VQSLOD=3.5424;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:24,11:39:63.17:4092,63,0	1/1:4,3:7:12.04:756,12,0	0/0:19,0:19:54.17:0,54,1912	0/0:23,0:23:54.18:0,54,1844	0/0:21,0:21:51.17:0,51,2798	0/0:20,0:20:60.19:0,60,2928	0/0:34,0:34:87.28:0,87,4113	0/0:36,0:36:90.27:0,90,4064	0/0:18,0:18:51.16:0,51,2543	1/1:22,13:38:87.12:6109,87,0	1/1:6,0:6:12.04:481,12,0	0/0:19,0:19:57.20:0,57,2820	0/0:10,0:10:27.09:0,27,1480	0/0:25,0:25:69.24:0,69,3543	0/0:23,0:23:57.19:0,57,2527	0/0:15,0:15:45.15:0,45,2385	1/1:18,10:29:57.20:5004,57,0	1/1:8,13:24:48.16:4126,48,0	0/0:12,0:12:36.11:0,36,1411	0/0:15,0:15:45.15:0,45,2226	0/0:58,0:58:99:0,163,7965	0/0:17,0:17:48.16:0,48,2223	0/0:8,0:8:21.07:0,21,1174	0/0:27,0:27:72.23:0,72,3648	0/0:15,0:15:45.15:0,45,2164	0/0:19,0:19:48.16:0,48,2557	0/0:22,0:22:66.23:0,66,3275	0/0:11,0:11:30.10:0,30,1677
chr10	87112234	.	T	TG	8248.12	PASS	AB=0.774;AC=54;AF=0.964;AN=56;BaseQRankSum=-0.580;DP=244;FS=31.695;HRun=1;HaplotypeScore=102.7293;InbreedingCoeff=-0.0623;MQ=69.97;MQ0=0;MQRankSum=-3.247;QD=33.80;ReadPosRankSum=1.750;VQSLOD=2.8037;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:10:21.07:314,21,0	1/1:1,5:6:18.03:245,18,0	0/1:7,3:10:24.38:167,0,24	0/1:5,2:7:30.51:124,0,31	1/1:4,13:17:33.11:487,33,0	1/1:0,11:11:27.09:404,27,0	1/1:4,10:14:33.07:468,33,0	1/1:2,10:12:36.12:538,36,0	1/1:0,2:2:6.02:90,6,0	1/1:2,8:10:27.05:379,27,0	1/1:2,9:11:24.05:334,24,0	1/1:1,17:18:54.14:780,54,0	1/1:2,4:6:12.04:179,12,0	1/1:2,6:8:18.06:269,18,0	1/1:0,4:4:12.04:179,12,0	1/1:1,3:4:9.03:135,9,0	1/1:2,5:7:21.03:289,21,0	1/1:3,15:18:39.13:583,39,0	1/1:4,9:13:30.10:449,30,0	1/1:1,5:6:15.05:224,15,0	1/1:3,4:7:5.87:68,6,0	1/1:0,6:6:15.05:222,15,0	1/1:0,8:8:18.06:269,18,0	1/1:3,3:6:6.02:90,6,0	1/1:0,3:3:9.03:133,9,0	1/1:2,9:11:30.07:425,30,0	1/1:0,7:7:21.07:314,21,0	1/1:0,2:2:6.02:90,6,0
chr10	87116540	.	TA	T	2880.26	PASS	AB=0.756;AC=26;AF=0.464;AN=56;BaseQRankSum=5.613;DP=473;FS=0.000;HRun=13;HaplotypeScore=47.0310;InbreedingCoeff=0.8290;MQ=55.98;MQ0=7;MQRankSum=2.034;QD=11.48;ReadPosRankSum=3.490;VQSLOD=3.0625;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,28:34:62.45:454,62,0	1/1:2,4:6:8.93:66,9,0	0/1:11,1:5:13.51:15,0,14	0/0:7,0:3:3:0,3,29	0/0:28,0:28:59.55:0,60,494	0/0:20,0:21:32.89:0,33,306	0/0:18,0:18:41.97:0,42,380	1/1:9,18:27:24.35:332,24,0	0/0:20,0:18:32.89:0,33,289	1/1:4,8:13:22.88:158,23,0	0/1:3,7:9:3.98:110,0,4	0/0:21,0:19:32.93:0,33,295	0/0:7,0:7:18.03:0,18,175	0/0:10,0:9:14.98:0,15,136	0/0:15,0:14:29.82:0,30,258	0/0:18,1:19:17.14:0,17,316	1/1:2,13:15:29.83:219,30,0	1/1:9,21:30:50.69:372,51,0	1/1:4,8:12:25.65:171,26,0	1/1:2,8:11:19.83:132,20,0	1/1:3,8:12:25.89:181,26,0	0/0:12,0:11:15.02:0,15,142	0/0:12,0:13:24.03:0,24,229	0/0:13,1:12:8.14:0,8,241	0/0:15,0:14:14.98:0,15,133	1/1:8,20:27:53.57:388,54,0	1/1:2,21:23:47.72:350,48,0	1/1:5,11:16:20.82:153,21,0
chr10	87117187	.	ACAC	A	165.54	PASS	AB=0.993;AC=13;AF=0.232;AN=56;BaseQRankSum=8.856;DP=699;FS=44.777;HRun=0;HaplotypeScore=186.7862;InbreedingCoeff=-0.2126;MQ=30.29;MQ0=94;MQRankSum=-7.193;QD=0.48;ReadPosRankSum=-1.617;VQSLOD=1.2801;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:23:20.83:0,21,357	0/1:13,0:9:3.07:5,0,3	0/0:2,0:1:3.01:0,3,40	0/0:4,0:1:3.01:0,3,40	0/0:17,0:15:5.40:0,5,84	0/1:17,1:16:5.23:5,0,208	0/0:29,0:25:18.05:0,18,391	0/0:41,3:27:8.92:0,9,678	0/0:34,0:29:24.94:0,25,475	0/1:67,0:43:87.76:88,0,1645	0/1:30,0:24:7.91:8,0,126	0/1:33,0:30:36.15:36,0,299	0/1:22,0:16:29.74:30,0,211	0/1:29,0:26:30.65:31,0,404	0/1:32,0:30:10.67:11,0,275	0/1:30,0:27:17.12:17,0,336	0/0:18,0:16:20.14:0,20,327	0/0:7,0:6:18.06:0,18,350	0/0:38,0:23:1.54:0,2,743	0/0:14,0:12:5.58:0,6,136	0/0:59,0:32:48.41:0,48,926	1/1:20,0:15:0.52:4,1,0	0/0:11,0:9:2.91:0,3,68	0/0:19,0:15:20.35:0,20,266	0/0:20,0:16:22.52:0,23,373	0/1:36,1:27:27.27:27,0,782	0/1:14,0:10:39.31:39,0,163	0/0:7,0:3:1:0,1,64
chr10	87117232	.	CAT	C	416.72	PASS	AB=0.969;AC=11;AF=0.204;AN=54;BaseQRankSum=11.300;DP=1082;FS=21.832;HRun=0;HaplotypeScore=280.3513;InbreedingCoeff=0.0636;MQ=34.71;MQ0=139;MQRankSum=-10.400;QD=1.17;ReadPosRankSum=-0.138;VQSLOD=1.1219;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:26:20.89:0,21,455	1/1:14,0:7:2.37:18,2,0	0/0:15,0:2:3.01:0,3,56	./.	0/0:30,0:28:8.59:0,9,163	0/1:19,0:19:38.96:39,0,318	0/0:40,1:38:22.57:0,23,955	0/1:64,0:40:3.20:3,0,589	0/0:49,0:45:49.31:0,49,1117	0/1:72,3:54:99:290,0,272	1/1:30,5:29:2.82:25,3,0	0/0:43,1:41:36.63:0,37,831	0/0:32,0:26:5.56:0,6,454	0/0:47,0:43:46.36:0,46,1003	0/0:40,0:38:12.02:0,12,751	0/1:36,0:32:7.77:8,0,585	0/1:22,2:22:57.11:110,0,57	0/0:19,0:16:21.07:0,21,567	0/0:63,0:31:31.62:0,32,808	0/0:31,0:29:17.73:0,18,345	0/0:97,0:70:89.26:0,89,2166	0/0:33,2:34:32.42:0,32,503	0/0:32,0:26:35.68:0,36,538	0/0:39,0:34:66.67:0,67,1102	0/0:33,0:28:22.02:0,22,509	0/1:57,0:46:51.49:51,0,1081	0/1:25,0:22:3.86:4,0,407	0/0:15,0:14:6.74:0,7,361
chr10	87117234	.	TAC	T	690.69	PASS	AB=0.916;AC=13;AF=0.241;AN=54;BaseQRankSum=8.600;DP=1089;FS=26.663;HRun=0;HaplotypeScore=281.8439;InbreedingCoeff=-0.1616;MQ=35.00;MQ0=135;MQRankSum=-8.986;QD=1.43;ReadPosRankSum=1.953;VQSLOD=1.0546;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:26:27.01:0,27,358	1/1:12,2:7:1.21:30,1,0	0/0:14,0:2:3.01:0,3,50	./.	0/0:29,4:31:8.80:0,9,151	0/1:16,4:20:92.37:92,0,372	0/0:40,2:40:21.69:0,22,800	0/1:58,5:39:99:115,0,406	0/0:50,2:45:82.43:0,82,1086	0/1:63,10:52:99:391,0,159	0/1:31,4:28:5.32:30,0,5	0/0:41,3:40:26.94:0,27,783	0/1:28,4:26:11.22:11,0,425	0/0:43,5:43:18.68:0,19,867	0/1:39,2:38:52.57:53,0,667	0/1:33,3:32:25.94:26,0,492	0/1:23,0:21:24.87:25,0,126	0/0:20,0:16:35.76:0,36,525	0/1:61,1:32:8.49:8,0,643	0/0:32,3:31:24.06:0,24,374	0/0:103,0:75:99:0,133,2058	0/0:33,5:35:32.86:0,33,499	0/0:27,5:26:35.97:0,36,538	0/0:40,0:35:66.12:0,66,996	0/0:31,3:28:5.33:0,5,453	0/1:54,5:45:47.85:48,0,901	0/1:22,4:23:6.66:7,0,449	0/0:17,0:14:17.12:0,17,391
chr10	87117255	.	T	TAC	3534.14	PASS	AB=0.851;AC=20;AF=0.357;AN=56;BaseQRankSum=-0.865;DP=1052;FS=0.000;HRun=0;HaplotypeScore=231.0138;InbreedingCoeff=0.3394;MQ=37.66;MQ0=99;MQRankSum=-0.791;QD=6.24;ReadPosRankSum=-2.331;VQSLOD=2.5005;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:21:5.98:55,6,0	1/1:10,0:7:2.04:6,2,0	0/0:17,0:3:3.01:0,3,34	0/0:29,0:2:0.89:0,1,2	0/0:36,0:36:20.44:0,20,201	0/0:23,0:23:17.06:0,17,180	0/1:42,1:42:36.23:36,0,339	1/1:67,2:47:32.06:429,32,0	0/0:49,0:42:46.14:0,46,523	1/1:57,0:43:11.37:166,11,0	0/1:27,1:25:0.11:1,0,0	0/0:39,0:36:51.83:0,52,560	0/0:30,0:23:14.70:0,15,279	0/0:40,0:34:30.03:0,30,328	0/0:35,0:36:37.66:0,38,407	0/0:35,0:29:20.96:0,21,242	0/1:11,1:24:0.25:124,0,0	1/1:13,0:16:23.99:215,24,0	0/1:41,8:26:58.18:323,0,58	0/1:28,4:30:10.59:257,0,11	0/1:90,12:82:99:889,0,138	0/0:37,0:35:26.09:0,26,299	0/0:31,0:28:35.31:0,35,414	0/0:40,0:37:59.27:0,59,594	0/0:34,0:31:14.44:0,14,133	0/1:47,5:40:12.67:517,0,13	0/1:18,12:27:48.35:212,0,48	1/1:5,11:14:0.43:304,0,0
chr10	87118094	.	G	GT	4087.62	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-12.815;DP=663;FS=0.375;HRun=7;HaplotypeScore=63.8265;InbreedingCoeff=0.9521;MQ=80.99;MQ0=0;MQRankSum=-0.297;QD=30.06;ReadPosRankSum=0.460;VQSLOD=3.9373;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,38:41:90.28:1087,90,0	1/1:2,8:10:1.12:296,1,0	0/0:19,0:19:28.46:0,28,301	0/0:16,0:17:27.68:0,28,231	0/0:18,0:18:51.08:0,51,490	0/0:23,0:22:54.05:0,54,510	0/0:27,0:27:69.05:0,69,653	0/0:39,0:39:99:0,108,1027	0/0:29,0:29:87.13:0,87,835	1/1:1,31:33:96.09:1110,96,0	1/1:1,12:13:36.11:435,36,0	0/0:27,0:27:78.12:0,78,753	0/0:23,0:23:63.08:0,63,603	0/0:21,0:21:63.09:0,63,602	0/0:29,0:29:75.10:0,75,716	0/0:25,0:25:69.10:0,69,662	1/1:2,21:23:60.18:725,60,0	1/1:4,12:16:36.11:435,36,0	0/0:16,0:16:48.08:0,48,463	0/0:22,0:22:66.11:0,66,637	0/0:23,0:23:48.06:0,48,463	0/0:17,0:17:51.07:0,51,489	0/0:21,0:21:57.04:0,57,539	0/0:40,0:40:99:0,102,970	0/0:17,0:17:48.04:0,48,452	0/0:25,0:25:63.09:0,63,607	0/0:22,0:22:63.05:0,63,592	0/0:27,0:27:77.65:0,78,753
chr10	87120530	.	GCTCT	G	34.90	PASS	AB=0.946;AC=6;AF=0.136;AN=44;BaseQRankSum=2.245;DP=589;FS=7.978;HRun=0;HaplotypeScore=90.7247;InbreedingCoeff=0.2302;MQ=65.34;MQ0=9;MQRankSum=0.640;QD=0.43;ReadPosRankSum=1.116;VQSLOD=0.9690;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:22,0:16:0:0,0,0	0/0:21,0:21:3.01:0,3,37	./.	0/0:28,0:33:12.04:0,12,194	0/0:43,0:41:5.35:0,5,14	0/0:25,0:25:24.08:0,24,422	0/0:22,0:22:1.25:0,1,3	./.	0/0:21,0:21:2.26:0,2,68	0/0:24,0:22:18.06:0,18,319	0/0:18,0:18:6.01:0,6,68	0/0:29,0:29:15.05:0,15,242	0/0:27,0:27:9.92:0,10,148	1/1:20,9:28:5.93:62,6,0	1/1:16,0:18:3:28,3,0	0/1:15,1:15:21.84:40,0,22	./.	0/0:27,0:27:6.02:0,6,107	0/0:21,0:21:8.04:0,8,138	0/0:11,0:11:6.02:0,6,103	0/0:26,0:35:2.74:0,3,12	0/0:12,0:11:3.01:0,3,61	0/1:18,0:19:10.01:10,0,33	0/0:16,0:16:12.04:0,12,210	0/0:15,0:14:2.98:0,3,21
chr10	87124737	.	G	GA	1178.19	PASS	AB=0.938;AC=16;AF=0.296;AN=54;BaseQRankSum=3.216;DP=480;FS=5.396;HRun=8;HaplotypeScore=91.7341;InbreedingCoeff=0.5329;MQ=43.44;MQ0=34;MQRankSum=-4.732;QD=7.06;ReadPosRankSum=-4.264;VQSLOD=0.6614;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:14,10:21:25.01:279,25,0	0/1:4,2:5:18.50:42,0,18	1/1:11,0:1:1.55:4,2,0	./.	0/0:25,0:23:32.74:0,33,298	0/0:17,0:16:17.80:0,18,164	0/0:26,0:23:35.71:0,36,320	0/0:24,0:24:2.13:0,2,314	0/0:12,0:10:14.74:0,15,136	1/1:4,13:16:29.88:325,30,0	1/1:14,7:17:17.75:147,18,0	0/0:26,0:23:28.79:0,29,267	0/0:9,0:9:11.22:0,11,108	0/0:13,0:13:17.19:0,17,163	0/0:26,0:24:5.55:0,6,266	0/1:20,0:18:18.91:19,0,184	1/1:12,11:19:3.82:269,4,0	1/1:9,7:13:27.18:256,27,0	0/1:18,0:17:4.47:4,0,235	0/0:14,0:14:14.51:0,15,136	0/0:17,0:16:21:0,21,192	0/0:12,0:12:7.80:0,8,60	0/0:11,0:11:7.66:0,8,150	0/0:23,1:21:18.49:0,18,188	0/0:14,0:12:14.59:0,15,137	0/0:12,0:11:14.84:0,15,137	0/0:22,0:20:20.25:0,20,257	0/1:10,0:9:2.63:3,0,70
chr10	87130006	.	A	ATTT	2846.41	PASS	AB=0.987;AC=29;AF=0.518;AN=56;BaseQRankSum=0.761;DP=407;FS=5.437;HRun=8;HaplotypeScore=86.1285;InbreedingCoeff=0.6833;MQ=81.72;MQ0=1;MQRankSum=-2.791;QD=12.43;ReadPosRankSum=-3.456;VQSLOD=-0.3846;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,12:23:28.53:380,29,0	1/1:2,0:4:5.78:66,6,0	0/0:25,0:15:29.09:0,29,289	0/1:22,0:16:8.88:9,0,176	0/0:8,0:8:8.97:0,9,118	0/0:13,0:13:20.96:0,21,239	0/0:21,0:21:20.87:0,21,254	1/1:9,1:24:38.78:467,39,0	0/1:14,0:14:65.86:99,0,66	1/1:4,0:4:3.01:60,3,0	1/1:4,0:8:15.85:157,16,0	0/0:13,0:13:5.87:0,6,79	0/0:8,0:8:11.94:0,12,124	0/0:15,0:15:17.93:0,18,208	0/0:13,0:13:14.58:0,15,195	0/0:15,0:15:14.97:0,15,196	1/1:6,2:19:31.57:477,32,0	1/1:1,4:16:21.07:345,21,0	1/1:17,0:19:29.81:301,30,0	1/1:7,0:8:9.49:118,9,0	1/1:3,0:27:20.59:126,21,0	0/1:9,0:9:1.78:2,0,33	0/0:8,0:8:2.94:0,3,39	0/0:22,0:22:26.95:0,27,345	0/0:16,0:16:9.56:0,10,153	1/1:8,0:17:26.18:219,26,0	1/1:11,0:11:21.44:178,21,0	1/1:2,0:2:3.01:47,3,0
chr10	87130160	.	C	CA	2116.26	PASS	AB=0.841;AC=24;AF=0.429;AN=56;BaseQRankSum=-4.324;DP=317;FS=47.905;HRun=0;HaplotypeScore=49.9380;InbreedingCoeff=0.7514;MQ=73.39;MQ0=2;MQRankSum=1.171;QD=15.56;ReadPosRankSum=2.587;VQSLOD=2.1914;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:15.82:140,16,0	0/1:3,0:3:29.19:29,0,34	0/0:20,0:15:35.62:0,36,298	0/0:13,0:10:20.66:0,21,198	0/0:11,0:11:14.17:0,14,125	0/0:12,0:12:32.97:0,33,307	0/0:19,0:19:44.88:0,45,412	1/1:5,14:19:18.91:266,19,0	0/0:12,0:12:22.41:0,22,194	1/1:2,0:9:14.70:112,15,0	1/1:1,0:3:5.96:44,6,0	0/0:8,0:8:11.57:0,12,96	0/0:7,0:7:12.46:0,12,102	0/0:10,0:10:11.57:0,12,96	0/0:20,0:20:59.89:0,60,545	0/0:13,0:13:31.90:0,32,273	0/1:8,7:15:19.12:19,0,49	1/1:4,0:4:9.42:67,9,0	1/1:1,11:13:28.04:340,28,0	1/1:4,4:8:14.94:150,15,0	1/1:5,18:23:14.75:391,15,0	0/0:12,0:12:14.98:0,15,153	0/0:2,0:2:3:0,3,27	0/0:9,0:9:15.90:0,16,149	0/0:13,0:13:20.38:0,20,141	1/1:2,7:9:20.95:236,21,0	1/1:3,12:16:40.89:492,41,0	1/1:1,2:3:3:39,3,0
chr10	87132613	.	G	GAA	7296.31	PASS	AB=0.563;AC=25;AF=0.446;AN=56;BaseQRankSum=-8.149;DP=587;FS=18.931;HRun=10;HaplotypeScore=77.6967;InbreedingCoeff=0.9017;MQ=76.70;MQ0=0;MQRankSum=-2.947;QD=26.25;ReadPosRankSum=-2.585;VQSLOD=2.5112;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,35:41:83.72:1175,84,0	0/1:2,7:9:15.47:164,0,15	0/0:16,0:16:2.68:0,3,154	0/0:21,0:22:17.62:0,18,289	0/0:11,0:11:29.49:0,29,294	0/0:28,0:28:63.04:0,63,628	0/0:22,0:24:62.59:0,63,603	1/1:9,26:37:84.69:1188,85,0	0/0:18,0:18:45.09:0,45,457	1/1:9,7:21:41.01:455,41,0	1/1:1,9:12:32.48:313,32,0	0/0:31,0:31:72.08:0,72,731	0/0:16,0:16:30.03:0,30,297	0/0:21,0:21:38.95:0,39,387	0/0:26,0:26:65.97:0,66,648	0/0:21,0:22:50.81:0,51,500	1/1:4,26:32:68.20:957,68,0	1/1:3,12:16:40.37:569,40,0	1/1:3,6:12:26.55:343,27,0	1/1:3,10:13:30.06:408,30,0	1/1:9,12:24:23.57:313,24,0	0/0:22,0:22:39.01:0,39,397	0/0:13,0:13:19.73:0,20,211	0/0:22,0:23:51.01:0,51,501	0/0:16,0:16:29.93:0,30,292	1/1:9,13:23:37.32:496,37,0	1/1:8,15:23:38.87:557,39,0	1/1:7,7:15:26.58:358,27,0
chr10	87138403	.	T	TTA	1156.47	PASS	AB=0.892;AC=27;AF=0.500;AN=54;BaseQRankSum=1.509;DP=316;FS=3.499;HRun=0;HaplotypeScore=56.7070;InbreedingCoeff=0.3428;MQ=86.87;MQ0=3;MQRankSum=-1.478;QD=5.59;ReadPosRankSum=-2.898;VQSLOD=1.9610;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:17:27.09:428,27,0	1/1:3,0:4:2.98:21,3,0	0/0:15,0:11:8.52:0,9,73	0/1:36,0:23:3.37:3,0,28	0/1:14,2:19:99:107,0,186	0/0:20,0:20:37.65:0,38,418	0/0:8,0:9:11.87:0,12,121	1/1:30,0:30:26.96:262,27,0	0/0:6,0:7:14.88:0,15,156	1/1:7,0:7:3:25,3,0	1/1:7,0:7:3:26,3,0	0/0:10,0:12:17.89:0,18,192	0/0:9,0:9:15.04:0,15,177	0/1:2,1:4:38.67:39,0,41	0/0:18,0:18:36.10:0,36,416	0/1:7,1:10:26.85:27,0,149	1/1:4,1:14:11.96:97,12,0	0/1:10,7:16:88.61:125,0,89	1/1:7,0:7:3:26,3,0	0/1:4,0:4:0:0,0,0	./.	0/0:3,0:3:3.01:0,3,36	0/0:7,0:7:12.04:0,12,142	0/0:5,0:6:11.87:0,12,121	0/1:11,0:12:20.66:21,0,236	1/1:5,0:7:5.96:45,6,0	1/1:5,0:6:3.47:27,3,0	1/1:5,0:6:6:52,6,0
chr10	87139410	.	G	GA	459.53	PASS	AB=0.804;AC=5;AF=0.093;AN=54;BaseQRankSum=-3.245;DP=500;FS=6.541;HRun=13;HaplotypeScore=47.1492;InbreedingCoeff=-0.0967;MQ=54.96;MQ0=10;MQRankSum=-0.610;QD=4.03;ReadPosRankSum=1.755;VQSLOD=0.0659;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:13,29:43:14.96:322,0,15	0/0:6,0:6:17.38:0,17,112	./.	0/1:26,0:4:7.26:7,0,14	0/0:16,1:17:1.18:0,1,121	0/0:15,1:17:15.71:0,16,239	0/0:12,1:17:13.41:0,13,177	0/0:27,3:32:4.53:0,5,320	0/0:15,0:15:44.45:0,44,299	0/0:19,0:19:50.50:0,51,346	0/0:8,0:9:21.88:0,22,132	0/0:20,0:20:47.31:0,47,317	0/0:8,0:8:15.72:0,16,105	0/0:16,0:15:35.30:0,35,236	0/1:8,2:10:37.85:38,0,63	0/0:11,0:11:24.66:0,25,155	0/0:36,0:36:71.82:0,72,542	0/1:7,13:21:11.26:180,0,11	0/0:15,0:16:18.94:0,19,212	0/1:12,0:12:23.94:24,0,98	0/0:12,0:12:19.62:0,20,144	0/0:5,0:5:5.91:0,6,41	0/0:11,0:10:23.78:0,24,164	0/0:18,0:18:35.58:0,36,246	0/0:12,1:14:0.85:0,1,141	0/0:24,1:25:12.73:0,13,219	0/0:18,2:20:7.83:0,8,198	0/0:11,0:13:15.76:0,16,106
chr10	87140677	.	ATT	A	1575.34	PASS	AB=0.846;AC=18;AF=0.321;AN=56;BaseQRankSum=3.303;DP=479;FS=2.953;HRun=17;HaplotypeScore=68.3846;InbreedingCoeff=0.6442;MQ=70.75;MQ0=9;MQRankSum=0.835;QD=7.06;ReadPosRankSum=3.528;VQSLOD=0.0520;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,32:49:73.48:620,73,0	0/0:5,0:12:23.97:0,24,232	0/1:31,1:10:14.76:15,0,64	0/1:24,0:10:12.41:18,0,12	0/0:18,0:20:32.52:0,33,301	0/0:14,0:18:34.80:0,35,352	0/0:10,0:12:18.66:0,19,190	1/1:6,14:24:36.29:246,36,0	0/0:19,0:18:39.05:0,39,425	0/0:6,0:18:43.89:0,44,367	0/0:14,0:19:30.50:0,31,261	0/0:15,0:15:28.79:0,29,302	0/0:5,0:7:5.98:0,6,46	0/0:9,0:13:20.79:0,21,189	0/0:14,0:14:24.01:0,24,256	0/0:11,0:14:32.58:0,33,375	0/0:5,0:20:36.54:0,37,379	1/1:2,11:14:17.63:181,18,0	1/1:7,6:13:11.30:121,11,0	0/1:5,2:6:1:39,0,1	1/1:7,4:12:8.16:58,8,0	0/0:4,0:5:3.48:0,3,39	0/0:10,0:11:25.53:0,26,247	0/0:12,1:19:31.65:0,32,332	0/0:12,0:16:32.39:0,32,345	0/1:6,8:14:18.67:89,0,19	1/1:7,15:23:37.92:296,38,0	1/1:1,8:10:5.82:86,6,0
chr10	87141842	.	T	TA	2378.80	PASS	AB=0.833;AC=15;AF=0.268;AN=56;BaseQRankSum=-6.483;DP=599;FS=0.000;HRun=12;HaplotypeScore=67.8176;InbreedingCoeff=0.8221;MQ=69.78;MQ0=2;MQRankSum=1.400;QD=14.24;ReadPosRankSum=-3.437;VQSLOD=2.9602;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:97.81:0,98,688	0/1:8,2:10:11.28:11,0,91	0/0:19,0:14:16.43:0,16,106	0/0:19,0:18:17.69:0,18,113	0/0:25,2:27:27.37:0,27,356	0/0:21,0:21:50.58:0,51,365	0/0:24,1:25:36.32:0,36,422	1/1:9,15:24:11.96:340,12,0	0/0:18,0:18:38.74:0,39,283	0/0:25,0:25:41.63:0,42,300	0/0:17,0:17:50.50:0,50,360	0/0:27,0:27:48.63:0,49,330	0/0:15,0:16:3.28:0,3,184	0/0:20,0:20:46.32:0,46,320	0/0:20,0:20:47.64:0,48,342	0/0:14,0:14:32.56:0,33,228	0/0:29,0:30:79.37:0,79,560	0/0:17,0:17:41.69:0,42,303	1/1:7,20:29:62.90:581,63,0	1/1:7,16:25:28.90:405,29,0	1/1:2,16:18:26.98:252,27,0	0/0:16,0:16:26.69:0,27,194	0/0:20,0:20:2.15:0,2,241	0/0:29,1:30:48.92:0,49,495	0/0:10,0:11:28.85:0,29,199	1/1:5,21:27:62.98:565,63,0	1/1:6,14:21:4.97:197,5,0	1/1:4,8:13:23.87:219,24,0
chr10	87144482	.	T	TAGCCTTGGC	15487.26	PASS	AB=0.550;AC=13;AF=0.232;AN=56;BaseQRankSum=-4.691;DP=784;FS=19.005;HRun=0;HaplotypeScore=218.7267;InbreedingCoeff=0.8991;MQ=77.36;MQ0=0;MQRankSum=-16.037;QD=87.01;ReadPosRankSum=-4.180;VQSLOD=2.6865;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,180,4857	0/0:9,0:9:24.08:0,24,702	0/0:24,0:24:58.44:0,58,1756	0/0:20,0:20:51.65:0,52,1516	0/0:23,0:23:57.67:0,58,1538	0/0:23,0:23:69.22:0,69,1952	0/0:33,0:33:99:0,99,2585	1/1:15,22:40:99:4419,114,0	0/0:43,0:43:99:0,129,3523	0/0:31,0:31:81.27:0,81,2245	0/0:10,0:10:27.09:0,27,738	0/0:45,0:45:99:0,129,3649	0/0:27,0:27:81.25:0,81,2310	0/0:43,0:43:99:0,126,3512	0/0:31,0:31:90.30:0,90,2655	0/0:33,0:33:96.32:0,96,2804	0/0:32,0:32:96.33:0,96,2828	0/0:34,0:34:99:0,102,2918	1/1:9,15:25:69.24:2821,69,0	1/1:5,12:17:39.13:1606,39,0	1/1:13,24:38:57.19:1907,57,0	0/0:16,0:16:27.99:0,28,712	0/0:16,0:16:48.16:0,48,1313	0/0:27,0:27:72.25:0,72,2211	0/0:25,0:25:66.23:0,66,1885	0/1:4,14:22:15:1715,0,15	1/1:3,22:28:57.20:2651,57,0	1/1:4,4:8:15.05:369,15,0
chr10	87146313	.	C	CCTG	10176.29	PASS	AB=0.537;AC=13;AF=0.232;AN=56;BaseQRankSum=-2.795;DP=686;FS=20.562;HRun=0;HaplotypeScore=100.5392;InbreedingCoeff=0.8997;MQ=83.26;MQ0=0;MQRankSum=-4.542;QD=61.67;ReadPosRankSum=0.914;VQSLOD=4.4700;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,153,2691	0/0:14,0:14:42.13:0,42,728	0/0:18,0:18:45.01:0,45,717	0/0:25,0:25:64.01:0,64,979	0/0:12,0:12:36.11:0,36,639	0/0:19,0:19:57.18:0,57,1015	0/0:36,0:36:99:0,102,1891	1/1:4,20:25:75.24:1671,75,0	0/0:32,0:32:96.25:0,96,1629	0/0:22,0:22:66.21:0,66,1175	0/0:13,0:13:39.11:0,39,665	0/0:24,0:24:72.25:0,72,1331	0/0:22,0:22:63.22:0,63,1164	0/0:29,0:29:87.30:0,87,1621	0/0:25,0:25:75.24:0,75,1366	0/0:23,0:23:57.20:0,57,1042	0/0:38,0:38:99:0,114,2117	0/0:25,0:25:75.12:0,75,1258	1/1:3,17:22:66.20:1531,66,0	1/1:0,10:12:33.07:759,33,0	1/1:0,33:37:81.60:1996,82,0	0/0:25,0:25:75.26:0,75,1390	0/0:12,0:12:33.11:0,33,614	0/0:29,0:29:84.25:0,84,1500	0/0:27,0:27:81.26:0,81,1476	0/1:4,24:29:86.59:1635,0,87	1/1:1,23:25:66.23:1625,66,0	1/1:0,13:15:39.13:959,39,0
chr10	87150570	.	C	CG	6270.30	PASS	AB=0.969;AC=52;AF=0.929;AN=56;BaseQRankSum=-4.298;DP=352;FS=1.987;HRun=0;HaplotypeScore=59.1337;InbreedingCoeff=0.0484;MQ=41.94;MQ0=0;MQRankSum=-6.427;QD=17.81;ReadPosRankSum=4.011;VQSLOD=7.1982;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:45.15:673,45,0	1/1:0,5:5:15.05:224,15,0	0/1:10,0:10:9.99:10,0,43	0/1:6,1:5:9.63:10,0,29	1/1:11,0:11:2.74:12,3,0	1/1:8,0:8:8.85:46,9,0	1/1:13,0:13:25.35:113,25,0	1/1:0,16:16:48.16:686,48,0	1/1:19,0:19:37.57:168,38,0	1/1:0,14:14:39.13:563,39,0	1/1:0,5:5:6.02:85,6,0	1/1:18,0:18:30.90:139,31,0	1/1:18,0:18:27.80:127,28,0	1/1:20,0:21:37.07:176,37,0	1/1:18,0:18:43.57:187,44,0	0/1:10,0:10:4.21:56,0,4	1/1:0,17:17:39.13:576,39,0	1/1:0,14:14:30.10:445,30,0	1/1:0,4:4:12.04:172,12,0	1/1:0,7:7:18.06:269,18,0	1/1:0,16:16:24.08:348,24,0	0/1:17,0:17:8.09:8,0,19	1/1:13,0:13:27.41:121,27,0	1/1:11,0:11:6.82:33,7,0	1/1:13,0:13:29.99:128,30,0	1/1:0,7:7:21.07:311,21,0	1/1:0,13:13:33.11:491,33,0	1/1:0,2:2:6.02:90,6,0
chr10	87211492	.	T	TGGG	1536.75	PASS	AC=14;AF=0.292;AN=48;BaseQRankSum=-1.651;DP=460;FS=7.944;HRun=8;HaplotypeScore=88.9868;InbreedingCoeff=0.9199;MQ=75.72;MQ0=0;MQRankSum=-3.219;QD=15.52;ReadPosRankSum=-3.950;VQSLOD=-0.2515;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:63.09:0,63,782	./.	0/0:24,0:23:54.15:0,54,697	0/0:23,0:23:47.54:0,48,531	0/0:11,0:11:7.63:0,8,358	0/0:20,0:20:45.11:0,45,591	0/0:24,0:24:66.20:0,66,867	1/1:14,7:21:17.98:261,18,0	0/0:16,0:16:45.10:0,45,572	./.	./.	0/0:14,0:14:36.10:0,36,473	0/0:18,0:18:51.11:0,51,650	0/0:25,0:25:66.20:0,66,867	0/0:25,0:25:57.13:0,57,731	0/0:24,0:24:63.18:0,63,828	./.	0/0:32,0:32:87.26:0,87,1140	1/1:6,7:15:24:352,24,0	1/1:8,4:12:6.02:117,6,0	1/1:5,7:16:24.03:407,24,0	0/0:18,0:18:42.11:0,42,539	0/0:18,0:18:45.11:0,45,576	0/0:24,0:24:66.20:0,66,865	0/0:17,0:17:48.15:0,48,625	1/1:7,5:13:18.51:312,19,0	1/1:9,5:15:12.01:203,12,0	1/1:2,4:7:3.01:61,3,0
chr10	87211615	.	G	GAA	2498.17	PASS	AB=0.909;AC=19;AF=0.396;AN=48;BaseQRankSum=-2.128;DP=519;FS=11.032;HRun=13;HaplotypeScore=90.0066;InbreedingCoeff=0.8641;MQ=69.20;MQ0=6;MQRankSum=0.424;QD=14.78;ReadPosRankSum=-2.662;VQSLOD=1.0620;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:23:27.96:127,28,0	./.	0/0:58,0:24:2.67:0,3,194	0/0:53,0:26:9.87:0,10,118	0/0:25,0:28:47.01:0,47,404	0/0:24,0:26:46.47:0,46,393	0/0:16,0:18:44.18:0,44,353	1/1:6,14:19:28.62:342,29,0	0/0:20,0:20:47.62:0,48,418	./.	./.	0/0:9,0:9:17.68:0,18,142	0/0:23,0:25:55.46:0,55,438	0/0:14,0:16:47.44:0,47,381	0/0:17,0:18:39.97:0,40,302	0/0:25,0:26:63.45:0,63,503	./.	1/1:4,13:18:24.07:300,24,0	1/1:5,8:13:29.53:335,30,0	1/1:5,16:22:38.02:376,38,0	1/1:2,5:7:6.02:82,6,0	0/1:8,0:10:8:8,0,143	0/0:8,0:8:20.70:0,21,171	0/0:24,0:26:52.81:0,53,412	0/0:11,0:13:23.54:0,24,232	1/1:5,11:18:38.76:454,39,0	1/1:5,17:22:17.65:244,18,0	1/1:10,4:16:35.09:425,35,0
chr10	87212959	.	GGGGGTT	G	666.73	PASS	AC=2;AF=0.042;AN=48;BaseQRankSum=4.519;DP=453;FS=2.703;HRun=0;HaplotypeScore=111.3591;InbreedingCoeff=0.9954;MQ=79.08;MQ0=0;MQRankSum=-5.366;QD=47.62;ReadPosRankSum=1.578;VQSLOD=3.8698;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.23:0,69,2209	./.	0/0:18,0:18:51.17:0,51,1572	0/0:17,0:15:45.15:0,45,1432	0/0:19,0:19:54.19:0,54,1775	0/0:16,0:16:45.15:0,45,1543	0/0:30,0:30:84.27:0,84,2695	0/0:19,0:19:54.17:0,54,1657	0/0:16,0:16:45.15:0,45,1440	./.	./.	0/0:15,0:15:42.14:0,42,1439	1/1:1,13:14:33.11:760,33,0	0/0:24,0:24:69.24:0,69,2321	0/0:19,0:19:54.17:0,54,1774	0/0:25,0:25:69.23:0,69,2322	./.	0/0:22,0:22:63.21:0,63,2100	0/0:17,0:17:48.16:0,48,1648	0/0:18,0:18:48.16:0,48,1586	0/0:19,0:19:47.75:0,48,1544	0/0:9,0:9:21.07:0,21,607	0/0:19,0:19:57.15:0,57,1742	0/0:24,0:24:72.22:0,72,2345	0/0:12,0:12:36.04:0,36,1002	0/0:21,0:20:54.18:0,54,1787	0/0:22,0:22:66.23:0,66,2249	0/0:13,0:13:39.13:0,39,1337
chr10	87213083	.	CCA	C	864.08	PASS	AB=0.872;AC=22;AF=0.478;AN=46;BaseQRankSum=1.946;DP=600;FS=3.723;HRun=0;HaplotypeScore=67.9229;InbreedingCoeff=0.0515;MQ=49.18;MQ0=53;MQRankSum=-0.264;QD=3.38;ReadPosRankSum=-1.327;VQSLOD=1.7516;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:8.51:0,9,86	0/1:3,0:3:0:0,0,0	./.	./.	0/1:8,4:12:39.37:39,0,69	0/1:19,0:18:27.20:27,0,38	0/1:26,4:31:61.98:62,0,276	1/1:21,0:16:2.99:23,3,0	0/1:9,1:12:31.74:32,0,113	./.	./.	0/0:8,0:8:12.04:0,12,171	0/0:9,0:8:8.98:0,9,91	0/0:10,0:10:12.07:0,12,176	0/1:10,3:13:23.71:24,0,80	0/1:14,1:15:41.27:41,0,244	./.	0/0:24,0:32:35.94:0,36,335	1/1:6,2:7:3.01:33,3,0	1/1:13,0:12:6:57,6,0	1/1:36,4:40:24.04:249,24,0	0/1:10,2:12:34.98:56,0,35	0/0:10,0:10:8.23:0,8,75	0/0:26,0:26:39.05:0,39,446	0/1:12,3:16:61.49:61,0,104	1/1:13,2:15:6.01:65,6,0	1/1:10,5:18:20.72:191,21,0	0/1:6,1:7:13.95:56,0,14
chr10	87213253	.	C	CGGGGGGG	7205.23	PASS	AB=0.865;AC=26;AF=0.520;AN=50;BaseQRankSum=0.380;DP=276;FS=301.292;HRun=1;HaplotypeScore=119.4291;InbreedingCoeff=-0.3782;MQ=28.45;MQ0=44;MQRankSum=-0.036;QD=30.79;ReadPosRankSum=-1.030;VQSLOD=-0.1417;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:4:6.02:0,6,139	0/0:3,0:3:9.03:0,9,196	./.	./.	1/1:4,2:4:6.02:225,6,0	1/1:7,0:10:12.04:441,12,0	0/1:11,6:16:99:1015,0,392	0/1:15,0:14:99:399,0,166	0/1:4,3:7:87.91:430,0,88	0/0:6,0:2:6.02:0,6,140	0/0:10,0:7:12.04:0,12,271	0/1:10,0:9:99:227,0,280	1/1:3,2:7:11.65:441,12,0	0/1:5,2:7:64.81:327,0,65	0/1:9,3:12:99:381,0,201	0/1:6,5:12:99:773,0,127	./.	0/1:11,0:7:55.55:170,0,56	0/1:11,0:10:71.13:251,0,71	0/1:14,0:13:99:193,0,188	1/1:12,0:12:9.03:136,9,0	0/1:7,1:8:99:225,0,177	0/1:10,0:10:53.08:251,0,53	0/1:6,2:9:61.18:218,0,61	0/1:7,1:9:99:199,0,253	0/1:16,0:15:99:562,0,165	0/1:12,0:7:58.21:257,0,58	1/1:8,0:3:6.02:85,6,0
chr10	87213255	.	A	AGGGGG	4326.17	PASS	AB=0.901;AC=24;AF=0.480;AN=50;BaseQRankSum=1.552;DP=256;FS=175.419;HRun=1;HaplotypeScore=124.8213;InbreedingCoeff=-0.3887;MQ=26.54;MQ0=44;MQRankSum=-0.119;QD=21.63;ReadPosRankSum=2.925;VQSLOD=1.2445;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:5:6.02:0,6,115	0/0:3,0:3:9.03:0,9,158	./.	./.	0/1:9,0:6:24.88:126,0,25	0/1:12,0:9:12.13:119,0,12	0/1:20,0:18:99:370,0,340	0/1:8,4:12:99:472,0,141	0/1:8,0:7:55.65:235,0,56	0/0:6,0:2:6.02:0,6,119	0/0:10,0:7:12.04:0,12,224	0/1:13,0:12:99:144,0,257	1/1:3,0:2:6.02:130,6,0	0/1:9,0:7:59.94:121,0,60	0/1:12,0:11:99:175,0,188	0/1:11,0:11:99:299,0,138	./.	0/0:10,0:6:16.51:0,17,127	0/1:6,3:8:61:244,0,61	0/1:6,6:11:99:308,0,171	1/1:2,3:7:5.98:165,6,0	0/1:6,0:6:51.76:52,0,144	0/1:4,0:4:14.96:15,0,46	1/1:8,0:7:5.54:84,6,0	0/1:11,0:11:99:109,0,233	0/1:6,8:12:99:652,0,139	0/1:6,4:6:48.19:335,0,48	1/1:5,0:3:6.02:172,6,0
chr10	87213270	.	AGAACC	A	902.91	PASS	AB=0.992;AC=25;AF=0.463;AN=54;BaseQRankSum=4.939;DP=320;FS=26.591;HRun=0;HaplotypeScore=120.5579;InbreedingCoeff=-0.3951;MQ=29.78;MQ0=42;MQRankSum=-2.260;QD=3.53;ReadPosRankSum=1.572;VQSLOD=0.7308;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,1:21:73.62:74,0,119	0/1:8,0:8:61.47:105,0,61	./.	0/1:11,0:3:16.81:17,0,22	0/0:10,0:8:11.33:0,11,168	0/0:13,0:11:11.79:0,12,136	0/1:23,0:21:84.24:84,0,152	0/1:23,1:22:91.51:92,0,309	0/1:7,0:6:10.03:10,0,27	0/1:5,0:3:15.57:16,0,42	1/1:8,4:10:6.22:55,6,0	0/1:12,0:10:43.37:43,0,82	0/1:3,0:3:0.96:3,0,1	0/1:9,0:7:2.27:2,0,33	0/0:12,0:11:6.81:0,7,174	0/1:13,0:13:36.17:36,0,130	0/1:14,0:3:27.38:39,0,27	0/0:14,0:8:19.07:0,19,156	0/1:16,0:13:7.75:82,0,8	0/1:12,0:12:39.85:127,0,40	0/1:3,0:2:3.98:4,0,44	0/1:8,0:7:40.35:57,0,40	1/1:7,0:7:1.65:37,2,0	0/1:8,0:8:5.75:6,0,53	0/1:14,0:14:60.36:60,0,112	0/1:13,0:12:47.20:50,0,47	1/1:8,0:3:8.82:56,9,0	0/0:9,0:5:2.59:0,3,13
chr10	87213507	.	TG	T	1151.23	PASS	AB=0.966;AC=30;AF=0.938;AN=32;BaseQRankSum=1.042;DP=81;FS=58.563;HRun=3;HaplotypeScore=63.8902;InbreedingCoeff=-0.1787;MQ=140.87;MQ0=1;MQRankSum=-3.639;QD=14.39;ReadPosRankSum=2.972;VQSLOD=-0.0720;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:3.01:34,3,0	./.	0/1:24,2:16:99:110,0,145	0/1:16,0:15:46.97:47,0,190	./.	1/1:0,4:4:9.03:101,9,0	1/1:2,2:4:8.97:85,9,0	1/1:0,1:1:3.01:34,3,0	1/1:1,3:4:9.02:99,9,0	./.	./.	1/1:0,1:1:3.01:34,3,0	1/1:0,1:1:3.01:34,3,0	1/1:0,2:2:6.02:67,6,0	1/1:0,2:2:6.02:67,6,0	1/1:0,1:1:3.01:34,3,0	1/1:1,4:5:12.03:131,12,0	./.	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:34,3,0	./.	1/1:0,4:4:12.03:134,12,0	1/1:0,6:6:18.05:201,18,0	./.
chr10	87213510	.	GT	G	1133.27	PASS	AB=0.895;AC=30;AF=0.938;AN=32;BaseQRankSum=1.360;DP=84;FS=42.726;HRun=4;HaplotypeScore=61.4717;InbreedingCoeff=-0.1787;MQ=143.78;MQ0=1;MQRankSum=-4.171;QD=13.82;ReadPosRankSum=3.726;VQSLOD=0.6506;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:1:3.01:34,3,0	./.	0/1:25,2:17:94.24:94,0,188	0/1:14,3:16:45.26:45,0,256	./.	1/1:4,0:4:9.03:101,9,0	1/1:4,0:4:8.97:85,9,0	1/1:1,0:1:3.01:34,3,0	1/1:4,0:4:9.02:99,9,0	./.	./.	1/1:1,0:1:3.01:34,3,0	1/1:1,0:1:3.01:34,3,0	1/1:2,0:2:6.02:67,6,0	1/1:2,0:2:6.02:67,6,0	1/1:1,0:1:3.01:34,3,0	1/1:4,0:4:12.03:131,12,0	./.	./.	./.	./.	./.	./.	1/1:1,0:1:3.01:34,3,0	./.	1/1:4,0:4:12.03:134,12,0	1/1:6,0:6:18.05:201,18,0	./.
chr10	87215079	.	CCGGGT	C	3063.70	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.703;DP=619;FS=14.353;HRun=0;HaplotypeScore=116.0648;InbreedingCoeff=0.9978;MQ=64.44;MQ0=0;MQRankSum=-2.085;QD=54.71;ReadPosRankSum=2.494;VQSLOD=3.7632;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,30:39:95.36:2048,95,0	0/0:7,0:7:21.04:0,21,602	0/0:16,0:16:45.15:0,45,1247	0/0:15,0:14:36.12:0,36,1130	0/0:24,0:24:69.19:0,69,2090	0/0:23,0:23:60.21:0,60,1899	0/0:22,0:22:66.23:0,66,2127	0/0:31,0:31:93.28:0,93,2754	0/0:18,0:18:51.18:0,51,1601	0/0:21,0:21:60.21:0,60,1904	0/0:21,0:21:57.20:0,57,1770	0/0:17,0:17:48.15:0,48,1447	0/0:16,0:16:48.16:0,48,1448	0/0:16,0:16:48.13:0,48,1462	0/0:22,0:22:63.20:0,63,1924	0/0:25,0:25:75.26:0,75,2299	0/0:23,0:23:63.22:0,63,1822	1/1:0,17:17:51.18:1137,51,0	0/0:19,0:19:54.19:0,54,1609	0/0:29,0:29:84.28:0,84,2597	0/0:24,0:24:72.25:0,72,2250	0/0:29,0:29:81.28:0,81,2564	0/0:28,0:28:78.27:0,78,2463	0/0:23,0:23:66.23:0,66,2072	0/0:21,0:21:63.20:0,63,1837	0/0:28,0:28:84.29:0,84,2685	0/0:24,0:24:69.24:0,69,2201	0/0:21,0:21:63.22:0,63,2034
chr10	87215160	.	C	CTT	1457.62	PASS	AB=0.869;AC=13;AF=0.232;AN=56;BaseQRankSum=11.345;DP=578;FS=1.390;HRun=10;HaplotypeScore=86.7283;InbreedingCoeff=0.6870;MQ=70.18;MQ0=1;MQRankSum=-1.027;QD=8.73;ReadPosRankSum=0.394;VQSLOD=1.0455;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:46:2.66:217,3,0	1/1:0,1:3:9.02:102,9,0	0/1:16,0:11:0.40:0,0,107	0/0:17,0:14:3.56:0,4,147	0/0:18,0:19:56.87:0,57,561	0/0:30,0:32:71.87:0,72,714	0/0:17,0:18:27.18:0,27,315	0/0:29,0:29:63.09:0,63,636	0/0:22,0:22:54.08:0,54,549	1/1:5,0:13:30.03:316,30,0	1/1:10,2:26:44.53:436,45,0	0/0:19,0:19:50.83:0,51,493	0/0:17,0:17:48.09:0,48,488	0/0:13,0:13:33.04:0,33,336	0/0:19,0:19:51.09:0,51,512	0/0:15,0:15:36.05:0,36,366	1/1:5,1:26:38.94:460,39,0	0/1:7,0:13:61.55:90,0,62	0/0:28,0:31:74.29:0,74,695	0/0:11,0:11:30.05:0,30,305	0/0:18,0:18:39.04:0,39,397	0/0:22,0:22:42.04:0,42,427	0/0:24,0:24:51.07:0,51,511	0/0:26,0:28:66.05:0,66,634	0/0:16,0:17:39.05:0,39,449	0/1:22,0:24:2.84:3,0,429	0/0:28,0:28:75.13:0,75,755	0/0:10,0:10:27.05:0,27,275
chr10	87215281	.	TC	T	7320.71	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=12.583;DP=510;FS=1.491;HRun=4;HaplotypeScore=53.4206;InbreedingCoeff=0.9881;MQ=74.97;MQ0=0;MQRankSum=-0.951;QD=30.63;ReadPosRankSum=0.446;VQSLOD=4.7825;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,38:41:99:1254,105,0	1/1:0,7:7:15.02:180,15,0	0/0:18,0:18:45.89:0,46,596	0/0:8,0:8:8.84:0,9,124	0/0:13,0:13:36.10:0,36,468	0/0:24,0:24:69.01:0,69,864	0/0:23,0:23:60.18:0,60,803	1/1:2,13:15:39.11:457,39,0	0/0:14,0:14:39.11:0,39,508	1/1:0,11:11:30.09:360,30,0	1/1:1,13:14:39:421,39,0	0/0:24,0:24:69.20:0,69,925	0/0:25,0:25:72.22:0,72,984	0/0:11,0:11:33.11:0,33,459	0/0:28,0:28:81.22:0,81,1063	0/0:19,0:19:57.16:0,57,759	1/1:1,26:27:72.22:861,72,0	1/1:1,26:27:75.20:883,75,0	1/1:0,19:19:57.06:627,57,0	1/1:0,18:18:53.62:583,54,0	1/1:0,17:17:45.14:539,45,0	0/0:20,0:20:57.10:0,57,736	0/0:16,0:16:48.16:0,48,666	0/0:16,0:16:45.13:0,45,608	0/0:12,0:12:36.12:0,36,501	1/1:1,15:16:39.16:473,39,0	1/1:1,8:9:17.62:215,18,0	1/1:0,18:18:39.12:467,39,0
chr10	87215652	.	C	CA	5094.55	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-7.746;DP=688;FS=2.257;HRun=1;HaplotypeScore=95.0833;InbreedingCoeff=0.9871;MQ=59.33;MQ0=13;MQRankSum=0.299;QD=42.10;ReadPosRankSum=1.774;VQSLOD=4.9613;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:63.21:1007,63,0	1/1:0,9:10:27.09:424,27,0	0/0:61,0:22:57.91:0,58,785	0/0:56,0:17:22.97:0,23,371	0/0:4,0:4:12.01:0,12,134	0/0:15,0:15:42.12:0,42,563	0/0:31,0:31:90.27:0,90,1211	0/0:27,0:27:39.51:0,40,417	0/0:26,0:26:78.24:0,78,1066	1/1:0,22:22:60.20:959,60,0	1/1:0,7:7:21.07:335,21,0	0/0:20,0:20:60.19:0,60,816	0/0:25,0:25:68.89:0,69,940	0/0:33,0:33:96.31:0,96,1320	0/0:23,0:23:69.23:0,69,948	0/0:22,0:22:63.20:0,63,861	1/1:5,29:34:93.32:1475,93,0	1/1:1,21:22:57.19:895,57,0	0/0:16,0:16:41.58:0,42,414	0/0:8,0:7:15.05:0,15,193	0/0:69,1:68:99:0,159,1810	0/0:10,0:10:27.09:0,27,376	0/0:9,0:9:24.07:0,24,315	0/0:42,0:42:99:0,113,1526	0/0:14,0:14:42.14:0,42,583	0/0:23,1:24:20.08:0,20,581	0/0:22,0:22:58.99:0,59,653	0/0:9,0:9:26.89:0,27,248
chr10	87216691	.	GAGAAC	G	10942.39	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=18.397;DP=637;FS=0.326;HRun=0;HaplotypeScore=157.9273;InbreedingCoeff=0.9988;MQ=74.62;MQ0=0;MQRankSum=-17.476;QD=45.40;ReadPosRankSum=-0.128;VQSLOD=4.8103;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,29:34:75.26:1512,75,0	1/1:3,7:10:24.08:497,24,0	0/0:31,0:30:73.56:0,74,2366	0/0:26,0:26:78.25:0,78,2121	0/0:25,0:25:75.26:0,75,2247	0/0:24,0:24:60.19:0,60,1777	0/0:22,0:22:66.21:0,66,1909	1/1:6,15:21:42.14:870,42,0	0/0:30,0:30:81.26:0,81,2370	1/1:5,22:27:66.21:1318,66,0	1/1:2,14:16:27.09:534,27,0	0/0:22,0:22:66.23:0,66,1983	0/0:23,0:23:69.24:0,69,2115	0/0:29,0:29:84.26:0,84,2416	0/0:43,0:43:99:0,126,3873	0/0:25,0:25:66.23:0,66,1991	1/1:3,12:15:33.11:684,33,0	1/1:1,11:12:33.11:684,33,0	1/1:2,11:13:27.09:560,27,0	1/1:2,15:17:39.13:808,39,0	1/1:3,13:16:21.07:435,21,0	0/0:26,0:26:78.27:0,78,2353	0/0:22,0:22:63.22:0,63,1898	0/0:31,0:30:87.30:0,87,2626	0/0:17,0:17:45.15:0,45,1361	1/1:7,26:32:78.25:1551,78,0	1/1:1,14:15:39.13:808,39,0	1/1:1,11:12:33.11:684,33,0
chr10	87217327	.	A	ACTCT	525.71	PASS	AB=1.000;AC=8;AF=0.154;AN=52;BaseQRankSum=-2.774;DP=276;FS=1.077;HRun=0;HaplotypeScore=51.9637;InbreedingCoeff=0.3850;MQ=81.31;MQ0=2;MQRankSum=-0.412;QD=5.71;ReadPosRankSum=-3.895;VQSLOD=0.6117;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:11.05:0,11,120	0/0:3,0:3:2.67:0,3,39	./.	0/1:32,0:16:0.19:0,0,6	0/0:10,0:10:9.49:0,9,114	0/0:8,0:9:12.03:0,12,138	0/0:6,0:6:3.01:0,3,38	1/1:25,0:24:29.46:434,29,0	0/0:3,0:3:3.01:0,3,38	0/0:3,0:6:9.50:0,9,112	0/0:5,0:5:6.01:0,6,64	0/0:8,0:7:6.02:0,6,77	0/0:9,0:9:9.02:0,9,103	0/0:6,0:6:8.99:0,9,95	0/0:8,0:8:9:0,9,87	0/0:13,0:13:27.07:0,27,323	1/1:9,5:17:9.03:182,9,0	0/1:10,0:10:6.86:7,0,134	0/0:6,0:6:3.01:0,3,36	0/0:9,0:9:12.03:0,12,155	0/0:7,0:7:3:0,3,25	0/0:3,0:3:0:0,0,0	0/0:3,0:3:3:0,3,25	./.	0/0:12,0:12:9.03:0,9,132	1/1:8,0:8:4.35:25,4,0	0/0:9,0:9:3:0,3,28	0/0:23,0:23:38.96:0,39,494
chr10	87217350	.	CTCTA	C	1015.69	PASS	AB=1.000;AC=28;AF=0.519;AN=54;BaseQRankSum=1.011;DP=213;FS=7.210;HRun=0;HaplotypeScore=40.3212;InbreedingCoeff=-0.2192;MQ=64.11;MQ0=7;MQRankSum=1.158;QD=6.43;ReadPosRankSum=0.013;VQSLOD=0.0252;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:7:8.67:9,0,104	0/0:1,0:1:0.47:0,0,1	0/0:8,0:2:0.47:0,0,1	0/0:22,0:7:4.43:0,4,19	0/1:9,0:9:8.67:9,0,82	0/1:8,0:8:26.13:53,0,26	0/1:5,0:5:15.97:40,0,16	0/1:31,0:30:53.52:54,0,225	0/1:2,0:2:18.58:19,0,19	1/1:4,0:4:11.99:102,12,0	1/1:2,0:2:5.97:43,6,0	0/1:6,0:6:25.30:25,0,37	1/1:7,0:7:11.90:94,12,0	0/1:6,0:6:25.46:102,0,25	0/1:4,0:4:35.22:61,0,35	1/1:11,0:11:32.95:276,33,0	0/0:12,0:12:15.01:0,15,201	0/0:10,0:11:20.99:0,21,233	0/1:5,0:4:14.89:20,0,15	0/1:4,0:4:12.59:13,0,63	0/1:5,0:5:15.47:15,0,19	0/1:1,0:1:0:0,0,0	1/1:1,0:1:3:25,3,0	./.	0/1:10,0:10:11.50:11,0,63	0/1:5,0:5:1.96:2,0,64	1/1:0,5:5:3.01:59,3,0	0/1:20,0:20:25.16:134,0,25
chr10	87217352	.	CTATA	C	864.40	PASS	AB=0.939;AC=17;AF=0.447;AN=38;BaseQRankSum=1.522;DP=207;FS=0.000;HRun=0;HaplotypeScore=42.6013;InbreedingCoeff=0.3434;MQ=64.52;MQ0=7;MQRankSum=-1.329;QD=7.65;ReadPosRankSum=0.385;VQSLOD=1.3686;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:5.23:0,5,49	0/0:1,0:1:2.99:0,3,23	./.	./.	0/1:7,2:9:0.07:0,0,0	0/0:7,0:7:6.02:0,6,83	0/0:3,0:3:2.97:0,3,49	1/1:12,0:30:18.88:316,19,0	0/0:2,0:2:3.01:0,3,49	./.	./.	1/1:5,0:5:5.91:62,6,0	0/0:7,0:7:2.90:0,3,16	0/1:5,0:5:20.17:20,0,54	0/0:4,0:4:3.01:0,3,70	1/1:11,0:11:6:70,6,0	0/1:12,0:12:24.95:25,0,210	0/0:6,0:12:15.03:0,15,224	0/0:5,0:4:2.98:0,3,21	./.	./.	./.	./.	./.	1/1:4,6:10:3.01:48,3,0	1/1:4,0:5:3.01:35,3,0	1/1:5,0:5:3.01:35,3,0	1/1:6,13:20:20.08:382,20,0
chr10	87218535	.	T	TA	1125.59	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-8.643;DP=569;FS=4.000;HRun=8;HaplotypeScore=56.2674;InbreedingCoeff=0.8505;MQ=65.79;MQ0=3;MQRankSum=-0.006;QD=18.76;ReadPosRankSum=4.690;VQSLOD=3.5474;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:22:48.14:554,48,0	0/0:10,0:10:21:0,21,192	0/1:16,0:11:0.97:1,0,109	0/0:17,0:9:11.93:0,12,100	0/0:20,0:20:54.03:0,54,494	0/0:23,0:23:62.98:0,63,568	0/0:12,0:12:33.01:0,33,302	0/0:33,0:33:77.32:0,77,675	0/0:16,0:16:42.01:0,42,384	0/0:18,0:18:54.03:0,54,494	0/0:16,0:16:39:0,39,351	0/0:13,0:13:39.02:0,39,357	0/0:13,0:13:32.99:0,33,297	0/0:16,0:16:35.99:0,36,321	0/0:22,0:22:56.98:0,57,514	0/0:29,0:29:83.82:0,84,749	0/0:37,0:37:99:0,99,906	1/1:0,22:22:60.18:692,60,0	0/0:21,0:21:47.99:0,48,434	0/0:22,0:22:57.03:0,57,521	0/0:8,0:8:21:0,21,192	0/0:17,0:17:45:0,45,403	0/0:23,0:23:54.02:0,54,493	0/0:18,0:18:45.02:0,45,412	0/0:34,0:34:98.98:0,99,886	0/0:34,0:34:96.04:0,96,877	0/0:27,0:27:66.01:0,66,599	0/0:10,0:10:27.01:0,27,247
chr10	87218862	.	TGCAAGCAAGCAAGCAAGCAAGCAAGCAA	T	3734.81	PASS	AB=0.713;AC=18;AF=0.346;AN=52;BaseQRankSum=7.926;DP=507;FS=0.681;HRun=0;HaplotypeScore=317.0197;InbreedingCoeff=0.7010;MQ=75.48;MQ0=9;MQRankSum=-5.685;QD=23.20;ReadPosRankSum=0.133;VQSLOD=1.6006;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,9:21:12.04:865,12,0	./.	0/0:29,0:16:6.02:0,6,227	0/0:33,0:26:18.06:0,18,632	0/0:16,0:16:27.09:0,27,2707	0/0:11,0:11:21.07:0,21,2131	0/0:33,0:32:75.23:0,75,6256	1/1:17,0:17:11.95:121,12,0	0/0:17,0:17:45.15:0,45,4388	0/1:12,0:18:86.09:86,0,181	0/0:3,0:7:9.02:0,9,156	0/0:21,0:21:51.14:0,51,4337	0/0:29,0:29:48.15:0,48,4838	0/0:19,0:18:33.10:0,33,3510	0/0:19,0:19:36.09:0,36,3088	0/0:19,0:19:45.15:0,45,4959	0/1:12,0:23:99:99,0,251	1/1:11,11:22:6.02:433,6,0	1/1:4,8:12:20.97:778,21,0	./.	1/1:12,11:23:5.18:429,5,0	0/0:11,0:11:21.07:0,21,2189	0/0:13,0:12:24.08:0,24,2673	0/0:38,0:38:78.26:0,78,8119	0/0:21,0:21:42.14:0,42,4465	1/1:9,9:18:23.94:470,24,0	1/1:1,4:5:6.02:433,6,0	1/1:2,0:2:2.98:22,3,0
chr10	87220372	.	TA	T	8115.43	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=9.405;DP=699;FS=3.882;HRun=4;HaplotypeScore=70.3099;InbreedingCoeff=0.9996;MQ=87.18;MQ0=0;MQRankSum=-0.543;QD=31.83;ReadPosRankSum=1.620;VQSLOD=5.4993;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:99:1224,102,0	0/0:15,0:15:42.14:0,42,586	0/0:22,0:22:66.21:0,66,890	0/0:25,0:25:66.15:0,66,855	0/0:20,0:20:60.18:0,60,808	0/0:21,0:21:60.20:0,60,840	0/0:39,0:39:99:0,111,1537	1/1:2,35:37:99:1258,105,0	0/0:23,0:23:66.22:0,66,919	0/0:18,0:18:51.16:0,51,686	0/0:17,0:17:41.78:0,42,538	0/0:20,0:20:54.18:0,54,755	0/0:25,0:25:69.23:0,69,966	0/0:24,0:24:72.23:0,72,991	0/0:22,0:22:63.21:0,63,882	0/0:17,0:17:51.17:0,51,714	0/0:38,0:38:99:0,108,1510	1/1:1,19:20:54.17:648,54,0	1/1:1,27:28:78.24:933,78,0	1/1:1,11:12:30.09:360,30,0	1/1:1,58:59:99:1908,159,0	0/0:28,0:28:81.26:0,81,1117	0/0:21,0:21:54.17:0,54,738	0/0:34,0:34:96.31:0,96,1328	0/0:15,0:15:42.12:0,42,557	1/1:1,28:29:78.24:935,78,0	1/1:0,20:20:48.15:575,48,0	1/1:2,11:13:24.05:275,24,0
chr10	87221225	.	TTA	T	2992.70	PASS	AB=0.989;AC=16;AF=0.286;AN=56;BaseQRankSum=1.375;DP=580;FS=2.322;HRun=0;HaplotypeScore=102.0210;InbreedingCoeff=0.2925;MQ=70.75;MQ0=17;MQRankSum=1.377;QD=11.74;ReadPosRankSum=1.664;VQSLOD=3.6904;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:32:37.11:168,0,37	1/1:2,9:11:12.51:243,13,0	0/0:44,0:16:29.56:0,30,347	0/0:34,0:17:22.19:0,22,290	0/0:20,0:20:59.99:0,60,911	0/0:21,0:20:59.95:0,60,908	0/0:22,0:22:66.14:0,66,1052	0/1:16,0:24:56.41:56,0,102	0/0:16,0:16:45.07:0,45,725	1/1:3,23:21:59.88:694,60,0	1/1:1,16:16:35.75:401,36,0	0/0:23,0:23:69.11:0,69,994	0/0:12,0:12:36.06:0,36,552	0/0:17,0:16:48.07:0,48,691	0/0:21,0:21:63.16:0,63,1091	0/0:21,0:21:63.01:0,63,1030	1/1:1,36:34:60.18:928,60,0	0/1:17,0:20:35.12:246,0,35	0/1:7,0:12:20.46:20,0,77	0/0:4,0:10:19.96:0,20,96	0/1:13,0:22:50.21:87,0,50	0/0:19,0:18:53.70:0,54,766	0/0:6,0:6:17.95:0,18,245	0/0:22,0:22:60.11:0,60,972	0/0:16,0:16:48.09:0,48,755	0/1:12,2:21:61.90:199,0,62	0/1:11,0:16:64.26:68,0,64	0/1:9,0:15:63.81:65,0,64
chr10	87221226	.	T	TA	2094.01	PASS	AB=0.960;AC=21;AF=0.375;AN=56;BaseQRankSum=9.623;DP=624;FS=15.623;HRun=12;HaplotypeScore=127.6472;InbreedingCoeff=0.7516;MQ=68.12;MQ0=18;MQRankSum=-7.980;QD=7.67;ReadPosRankSum=-4.877;VQSLOD=-0.3886;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:38:51.53:291,52,0	0/1:11,0:11:20.55:21,0,21	0/0:45,0:16:5.02:0,5,66	0/1:34,0:16:13.28:13,0,54	0/1:18,3:22:2.06:2,0,212	0/0:22,0:21:13.26:0,13,247	0/0:22,1:23:43.59:0,44,306	1/1:26,0:27:32.51:312,33,0	0/0:18,0:18:37.50:0,37,255	0/0:26,0:21:27.86:0,28,91	0/0:19,0:17:5.16:0,5,30	0/0:22,2:24:47.02:0,47,323	0/0:14,0:14:26.52:0,27,184	0/0:15,0:14:24.42:0,24,177	0/0:20,0:20:50.59:0,51,364	0/0:21,0:21:55.91:0,56,382	0/0:37,0:34:37.97:0,38,117	1/1:26,0:25:40.88:235,41,0	1/1:15,0:15:24.68:236,25,0	1/1:14,0:14:13.34:212,13,0	1/1:25,0:25:26.26:296,26,0	0/0:19,0:19:22:0,22,211	0/0:8,0:8:11.86:0,12,86	0/0:21,0:23:52.55:0,53,363	0/0:16,0:16:29.74:0,30,219	1/1:22,0:22:12.95:175,13,0	1/1:23,0:22:32.30:304,32,0	1/1:15,0:15:18.43:205,18,0
chr10	87221243	.	G	GA	1167.42	PASS	AB=0.993;AC=21;AF=0.375;AN=56;BaseQRankSum=3.005;DP=597;FS=2.233;HRun=14;HaplotypeScore=103.7464;InbreedingCoeff=0.5577;MQ=58.01;MQ0=20;MQRankSum=-4.661;QD=4.08;ReadPosRankSum=-2.906;VQSLOD=1.0873;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:38:38.53:245,39,0	0/0:8,0:8:11.73:0,12,73	0/0:41,0:9:8.89:0,9,51	0/0:35,0:13:2.49:0,2,46	0/1:21,0:21:1:1,0,98	0/1:28,1:28:8.29:8,0,259	0/1:23,0:23:39.40:39,0,185	0/1:30,0:30:8.68:107,0,9	0/0:17,0:16:12.73:0,13,69	0/0:19,0:15:21.72:0,22,230	0/0:17,0:15:25.11:0,25,155	0/1:20,0:20:4.27:4,0,84	0/0:16,0:17:23.68:0,24,127	0/0:12,0:11:1.56:0,2,5	0/0:23,0:24:25.31:0,25,157	0/0:22,0:22:28:0,28,168	0/0:33,0:30:61.99:0,62,398	1/1:20,0:20:29.22:160,29,0	1/1:18,1:19:9.52:117,10,0	1/1:18,1:19:32.08:160,32,0	1/1:17,1:18:15.03:99,15,0	0/0:18,0:17:15:0,15,88	0/0:8,0:9:5.71:0,6,18	0/0:24,0:24:19.79:0,20,135	0/0:13,0:14:19.47:0,19,112	1/1:21,1:22:2.92:159,3,0	1/1:19,0:18:32.11:196,32,0	1/1:8,0:8:8.85:61,9,0
chr10	87221245	.	A	AAG	1658.74	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=6.233;DP=592;FS=1.690;HRun=0;HaplotypeScore=109.6446;InbreedingCoeff=0.7489;MQ=57.97;MQ0=19;MQRankSum=-7.202;QD=7.54;ReadPosRankSum=-1.060;VQSLOD=3.3051;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:39:0.51:209,0,1	0/1:8,0:8:17.51:18,0,68	0/0:41,0:9:16.94:0,17,178	0/0:34,0:12:5.06:0,5,131	0/0:19,0:19:49.55:0,50,531	0/0:29,0:28:82.86:0,83,1026	0/0:23,0:23:38.27:0,38,708	1/1:31,0:32:33.28:336,33,0	0/0:17,0:16:47.81:0,48,448	0/0:19,0:15:12.02:0,12,111	0/1:18,0:16:35.17:35,0,89	0/0:19,0:19:50.90:0,51,536	0/0:18,0:18:51.10:0,51,577	0/0:13,0:12:32.86:0,33,264	0/0:24,0:24:72.09:0,72,784	0/0:19,0:19:54.04:0,54,645	0/0:31,0:28:41.20:0,41,189	1/1:18,2:20:7.54:228,8,0	1/1:16,2:18:21.16:248,21,0	1/1:19,0:19:28.81:236,29,0	1/1:18,1:19:9.35:135,9,0	0/0:19,0:18:50.16:0,50,517	0/0:10,0:10:23.39:0,23,212	0/0:24,0:24:63.06:0,63,695	0/0:13,0:13:39.07:0,39,455	1/1:24,0:24:12.01:173,12,0	1/1:16,0:15:32.15:168,32,0	1/1:7,0:7:15.38:75,15,0
chr10	87221246	.	A	AG	3154.93	PASS	AB=0.930;AC=21;AF=0.375;AN=56;BaseQRankSum=4.434;DP=598;FS=0.000;HRun=0;HaplotypeScore=93.8377;InbreedingCoeff=0.6225;MQ=58.16;MQ0=19;MQRankSum=-6.644;QD=11.39;ReadPosRankSum=1.691;VQSLOD=3.8855;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,15:39:7.23:439,0,7	0/1:8,0:8:16.57:17,0,54	0/0:41,0:9:17.14:0,17,199	0/1:34,0:12:2.20:2,0,148	0/0:19,0:19:48.75:0,49,527	0/0:29,0:28:79.57:0,80,926	0/0:22,0:23:15.98:0,16,611	1/1:23,10:33:43.26:504,43,0	0/0:18,0:17:47.97:0,48,456	0/1:19,0:15:44.02:44,0,54	0/1:18,0:16:48.51:49,0,54	0/0:19,0:19:51.48:0,51,523	0/0:19,0:19:54.07:0,54,570	0/0:13,0:12:35.85:0,36,288	0/0:24,0:24:72.09:0,72,755	0/0:19,0:19:54.07:0,54,603	0/0:31,0:28:4.68:0,5,52	1/1:9,11:20:8.44:405,8,0	1/1:8,10:18:36.27:324,36,0	1/1:3,15:18:40.39:454,40,0	1/1:11,7:20:16.24:221,16,0	0/0:19,0:18:53.37:0,53,516	0/0:10,0:10:26.98:0,27,238	0/0:24,0:24:63.04:0,63,656	0/0:13,0:13:39.07:0,39,433	1/1:15,11:26:15.69:376,16,0	1/1:6,11:16:33.11:380,33,0	1/1:4,3:7:16.49:145,16,0
chr10	87221922	.	C	CG	2052.77	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.397;DP=661;FS=2.326;HRun=7;HaplotypeScore=81.0211;InbreedingCoeff=0.9991;MQ=84.16;MQ0=0;MQRankSum=-2.578;QD=27.01;ReadPosRankSum=3.087;VQSLOD=4.4203;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,40:45:99:1268,105,0	0/0:10,0:10:27.04:0,27,261	0/0:18,0:18:47.95:0,48,449	0/0:22,0:22:38.74:0,39,364	0/0:19,0:19:57.09:0,57,550	0/0:16,0:16:45.07:0,45,434	0/0:25,0:25:63.08:0,63,602	0/0:29,0:29:75.09:0,75,717	0/0:33,0:33:87.13:0,87,840	0/0:25,0:25:63.08:0,63,601	0/0:15,0:15:42.07:0,42,406	0/0:28,0:28:78.12:0,78,753	0/0:21,0:21:57.07:0,57,544	0/0:23,0:23:57.08:0,57,550	0/0:18,0:19:53.12:0,53,498	0/0:27,0:28:69.10:0,69,666	0/0:51,0:51:99:0,135,1293	1/1:4,27:31:75.23:906,75,0	0/0:14,0:14:36.05:0,36,348	0/0:20,0:20:54.07:0,54,516	0/0:25,0:25:69.11:0,69,666	0/0:19,0:19:57.09:0,57,550	0/0:21,0:21:54.07:0,54,515	0/0:26,0:26:60.08:0,60,579	0/0:21,0:21:57.09:0,57,550	0/0:16,0:16:45.07:0,45,434	0/0:30,0:30:69.10:0,69,665	0/0:11,0:11:30.04:0,30,290
chr10	87222443	.	A	AGG	5815.37	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-9.923;DP=558;FS=4.866;HRun=2;HaplotypeScore=67.2207;InbreedingCoeff=0.9825;MQ=87.09;MQ0=0;MQRankSum=-1.449;QD=41.84;ReadPosRankSum=-0.766;VQSLOD=4.5445;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1562	0/0:10,0:10:30.03:0,30,397	0/0:19,0:19:54.05:0,54,741	0/0:19,0:19:22.38:0,22,637	0/0:18,0:18:51.17:0,51,749	0/0:15,0:15:42.11:0,42,595	0/0:17,0:17:51.13:0,51,687	1/1:3,15:18:54.13:868,54,0	0/0:16,0:16:48.16:0,48,707	0/0:21,0:21:45.15:0,45,663	0/0:9,0:9:24.08:0,24,353	0/0:16,0:16:48.14:0,48,685	0/0:15,0:15:45.14:0,45,640	0/0:21,0:21:60.16:0,60,859	0/0:30,0:30:87.29:0,87,1276	0/0:14,0:14:42.14:0,42,618	0/0:34,0:34:99:0,99,1407	0/0:33,0:33:96.32:0,96,1411	1/1:8,15:24:63.06:989,63,0	1/1:2,11:13:33.07:582,33,0	1/1:0,31:31:61.76:1128,62,0	0/0:12,0:12:36.11:0,36,511	0/0:13,0:13:36.12:0,36,522	0/0:30,0:30:90.30:0,90,1319	0/0:21,0:21:54.16:0,54,771	1/1:2,17:19:6.98:846,7,0	1/1:2,23:25:51.05:954,51,0	1/1:0,9:9:24.08:449,24,0
chr10	87223960	.	TTGTG	T	8112.78	PASS	AB=0.812;AC=18;AF=0.321;AN=56;BaseQRankSum=9.457;DP=1159;FS=8.457;HRun=0;HaplotypeScore=244.3827;InbreedingCoeff=0.8527;MQ=60.13;MQ0=17;MQRankSum=-2.756;QD=17.91;ReadPosRankSum=-0.513;VQSLOD=3.2740;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,40:60:87.64:1363,88,0	0/0:5,0:14:20.86:0,21,273	0/0:40,0:22:15.03:0,15,267	0/0:59,0:24:12.04:0,12,174	0/0:22,0:22:41.38:0,41,721	0/0:24,0:25:51.05:0,51,1088	0/1:43,1:44:0.87:1,0,1407	1/1:25,25:50:60.49:1004,60,0	0/0:48,0:54:99:0,140,2841	0/0:23,0:49:82.40:0,82,1132	0/0:11,0:25:6.18:0,6,64	0/0:33,0:38:83.22:0,83,1664	0/0:40,0:42:99:0,99,2239	0/0:35,0:43:97.44:0,97,1856	0/0:47,0:52:99:0,111,2214	0/0:53,0:56:99:0,114,2380	0/0:19,0:35:33.08:0,33,476	0/1:14,0:31:12.23:12,0,291	1/1:12,12:24:39.07:566,39,0	1/1:10,17:27:38.86:430,39,0	1/1:68,45:114:99:2601,164,0	0/0:25,0:28:35.59:0,36,722	0/0:19,0:18:38.62:0,39,851	0/0:67,0:71:99:0,170,3437	0/0:30,0:31:74.99:0,75,1589	1/1:25,24:47:64.89:1026,65,0	1/1:9,21:29:46.22:618,46,0	1/1:4,16:20:30.10:493,30,0
chr10	87224173	.	ATGTGTGTGTGTGTGTGTGTGTGTGTGTG	A	4627.96	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=9.656;DP=881;FS=2.112;HRun=0;HaplotypeScore=569.3696;InbreedingCoeff=0.0923;MQ=53.79;MQ0=30;MQRankSum=-8.013;QD=13.15;ReadPosRankSum=-1.751;VQSLOD=0.7140;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:40:99:374,0,146	1/1:10,0:10:19.87:654,20,0	0/0:28,0:15:2.13:0,2,194	0/0:44,0:25:18.06:0,18,716	0/0:26,0:28:39.13:0,39,2247	0/0:25,0:26:54.22:0,54,3332	0/0:43,0:43:87.30:0,87,4527	0/1:40,0:37:29.25:29,0,232	0/0:36,0:38:80.58:0,81,4337	1/1:12,23:33:43.14:631,43,0	1/1:11,0:11:5.74:30,6,0	0/0:38,0:39:75.21:0,75,3623	0/0:25,0:31:54.17:0,54,2834	0/0:37,0:38:87.28:0,87,4570	0/0:48,0:49:88.84:0,89,4330	0/0:30,0:39:63.20:0,63,3172	0/1:22,0:20:99:222,0,144	0/1:29,0:24:99:872,0,263	0/1:28,0:27:99:810,0,123	0/1:20,0:20:17.21:240,0,17	0/1:61,0:50:58.70:59,0,61	0/0:32,0:33:63.20:0,63,3001	0/0:19,0:19:30.10:0,30,1877	0/0:51,0:53:96.30:0,96,4818	0/0:19,0:19:27.07:0,27,1360	0/1:29,0:25:98.55:302,0,99	0/1:20,0:18:10.34:291,0,10	0/1:4,0:4:15.95:113,0,16
chr10	87224192	.	T	TG	2603.09	PASS	AB=0.923;AC=22;AF=0.393;AN=56;BaseQRankSum=8.605;DP=768;FS=0.881;HRun=1;HaplotypeScore=171.9794;InbreedingCoeff=0.6322;MQ=47.49;MQ0=65;MQRankSum=-10.383;QD=10.13;ReadPosRankSum=-1.625;VQSLOD=0.8471;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,3:29:75.86:229,0,76	1/1:9,0:8:11.89:36,12,0	0/0:26,0:5:11.71:0,12,151	0/0:44,0:10:24.08:0,24,305	0/0:25,0:24:45.08:0,45,555	0/0:25,0:25:63.62:0,64,729	0/0:45,0:42:96.40:0,96,1365	1/1:22,1:19:12.16:418,12,0	0/0:37,0:35:86.40:0,86,1002	0/1:29,0:26:15.06:55,0,15	1/1:8,0:8:3.37:9,3,0	0/0:34,0:33:85.80:0,86,1062	0/0:33,0:31:70:0,70,808	0/0:37,0:37:99:0,108,1343	0/0:46,0:44:99:0,106,1301	0/0:38,0:38:81.58:0,82,982	0/1:19,0:12:5.07:5,0,55	0/1:17,6:18:99:385,0,115	1/1:15,6:19:21.90:634,22,0	1/1:10,7:16:11.63:169,12,0	1/1:34,6:28:8.56:283,9,0	0/0:32,0:30:81.18:0,81,1000	0/0:19,0:19:45.12:0,45,545	0/0:53,0:51:85.81:0,86,1381	0/0:16,0:16:36.03:0,36,418	1/1:14,1:11:29.83:379,30,0	1/1:11,2:10:11.62:155,12,0	1/1:3,1:2:3.01:45,3,0
chr10	87224193	.	GT	G	1919.32	PASS	AB=0.810;AC=13;AF=0.232;AN=56;BaseQRankSum=6.596;DP=789;FS=0.925;HRun=1;HaplotypeScore=184.1824;InbreedingCoeff=-0.0921;MQ=47.90;MQ0=65;MQRankSum=-9.141;QD=7.19;ReadPosRankSum=-1.659;VQSLOD=0.0635;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,9:27:99:216,0,128	0/0:9,0:8:0.48:0,0,12	0/0:24,0:4:12.04:0,12,152	0/0:45,0:11:24.08:0,24,304	0/0:25,0:24:47.35:0,47,640	0/0:26,0:26:65.58:0,66,791	0/0:49,0:46:99:0,109,1578	0/1:19,8:23:99:382,0,134	0/0:36,0:34:87.21:0,87,1098	0/1:29,0:26:33.49:40,0,33	1/1:8,0:8:3.37:9,3,0	0/0:34,0:33:87.25:0,87,1176	0/0:33,0:31:71.50:0,71,861	0/0:38,0:38:99:0,109,1451	0/0:45,0:43:99:0,103,1327	0/0:38,0:38:80.10:0,80,1038	0/1:20,0:13:11.21:11,0,66	0/1:18,5:17:99:157,0,171	0/1:13,10:20:15.75:477,0,16	0/1:16,7:22:87.24:100,0,87	0/1:27,19:32:68.03:262,0,68	0/0:32,0:30:80.46:0,80,1055	0/0:20,0:20:45.04:0,45,593	0/0:51,0:48:99:0,117,1477	0/0:16,0:16:33.97:0,34,436	0/1:8,8:12:0.88:306,0,1	0/1:10,7:15:44.52:92,0,45	0/1:4,0:2:15.74:17,0,16
chr10	87224197	.	G	GTCCA	3825.08	PASS	AB=0.890;AC=16;AF=0.296;AN=54;BaseQRankSum=12.789;DP=801;FS=2.546;HRun=0;HaplotypeScore=227.3095;InbreedingCoeff=0.2742;MQ=46.54;MQ0=66;MQRankSum=-12.751;QD=13.24;ReadPosRankSum=-1.901;VQSLOD=2.8738;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,3:27:49.33:260,0,49	1/1:7,4:10:21.44:415,21,0	0/0:26,0:4:9.03:0,9,175	0/0:45,0:9:24.08:0,24,419	0/0:23,0:22:45.15:0,45,845	0/0:26,0:27:69.18:0,69,1252	0/0:48,0:46:99:0,123,2324	0/1:23,0:20:49.88:270,0,50	0/0:36,0:34:83.54:0,84,1517	0/1:28,1:26:72.61:211,0,73	./.	0/0:30,0:29:81.24:0,81,1485	0/0:33,0:31:77.77:0,78,1437	0/0:36,0:36:99:0,105,1989	0/0:42,0:40:93.69:0,94,1780	0/0:38,0:38:81.24:0,81,1442	0/1:19,2:14:75.29:204,0,75	0/1:18,6:18:60.84:555,0,61	1/1:16,6:19:26.69:763,27,0	0/1:16,8:23:26.71:165,0,27	0/1:52,5:43:62.59:176,0,63	0/0:30,0:28:72.25:0,72,1373	0/0:23,0:23:51.16:0,51,956	0/0:50,0:47:99:0,114,2155	0/0:15,0:15:36.12:0,36,685	1/1:21,1:18:11.97:433,12,0	1/1:16,2:15:19.65:297,20,0	0/1:5,1:4:21.14:77,0,21
chr10	87224199	.	G	GTCCA	2609.90	PASS	AB=0.992;AC=17;AF=0.304;AN=56;BaseQRankSum=11.705;DP=826;FS=0.484;HRun=0;HaplotypeScore=238.2078;InbreedingCoeff=0.3905;MQ=46.46;MQ0=66;MQRankSum=-11.215;QD=8.50;ReadPosRankSum=-3.218;VQSLOD=2.1989;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,2:29:57.38:223,0,57	0/1:9,0:8:13.35:129,0,13	0/0:29,0:5:12.04:0,12,210	0/0:48,0:9:18.06:0,18,352	0/0:23,0:22:45.14:0,45,811	0/0:27,0:27:66.16:0,66,1187	0/0:48,0:45:99:0,120,2251	0/1:22,0:19:4.83:271,0,5	0/0:36,0:34:83.14:0,83,1463	0/1:28,0:25:67.02:75,0,67	0/0:9,0:9:1.25:0,1,3	0/0:29,0:28:75.23:0,75,1404	0/0:33,0:31:74.76:0,75,1409	0/0:36,0:36:99:0,105,1984	0/0:42,0:40:93.69:0,94,1773	0/0:38,0:38:75.21:0,75,1377	0/1:21,0:15:40.90:41,0,79	0/1:27,0:21:69.62:424,0,70	1/1:24,0:21:32.74:573,33,0	1/1:24,0:23:5.39:113,5,0	1/1:62,3:52:14.12:228,14,0	0/0:30,0:28:75.26:0,75,1440	0/0:24,0:24:54.19:0,54,1038	0/0:52,0:49:99:0,116,2186	0/0:15,0:15:36.11:0,36,652	1/1:23,1:20:24.05:396,24,0	1/1:17,1:15:15.03:259,15,0	0/1:11,0:9:30.96:60,0,31
chr10	87224876	.	TG	T	1009.08	PASS	AB=0.868;AC=33;AF=0.611;AN=54;BaseQRankSum=5.798;DP=315;FS=7.165;HRun=11;HaplotypeScore=60.3352;InbreedingCoeff=0.3682;MQ=71.20;MQ0=0;MQRankSum=-1.361;QD=4.04;ReadPosRankSum=5.609;VQSLOD=-0.1898;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:6.17:15,6,0	1/1:0,0:5:2.04:6,2,0	0/0:13,0:9:6.77:0,7,74	0/1:10,1:10:0.91:1,0,144	0/0:4,0:4:0:0,0,0	0/0:5,0:5:3.01:0,3,32	0/1:17,4:23:28.82:29,0,294	1/1:0,11:11:17.94:147,18,0	0/0:8,0:8:13.24:0,13,109	1/1:2,0:9:13.11:38,13,0	1/1:1,0:8:8.15:24,8,0	0/1:11,1:12:9.58:10,0,113	0/0:7,1:8:11.90:0,12,93	0/0:18,0:18:33.03:0,33,318	1/1:2,3:5:8.98:74,9,0	0/1:11,2:13:3.62:4,0,156	1/1:8,0:33:40.71:120,41,0	1/1:4,0:26:30.54:88,31,0	1/1:5,4:9:14.88:114,15,0	1/1:1,4:5:5.98:49,6,0	1/1:10,15:25:35.91:289,36,0	0/1:8,1:9:3.61:4,0,156	./.	0/1:11,2:13:25.26:25,0,147	0/0:7,0:7:12:0,12,113	1/1:6,4:11:14.01:104,14,0	0/1:6,3:9:18.64:19,0,19	1/1:0,1:1:2.98:21,3,0
chr10	87224886	.	GGC	G	217.05	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=4.671;DP=321;FS=1.644;HRun=0;HaplotypeScore=62.8247;InbreedingCoeff=0.5352;MQ=71.05;MQ0=0;MQRankSum=-0.064;QD=5.17;ReadPosRankSum=3.855;VQSLOD=2.2406;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,12:13:23.89:265,24,0	0/0:6,0:6:8.16:0,8,49	0/0:13,0:8:2.59:0,3,136	0/0:10,0:9:20.99:0,21,295	0/0:2,0:2:6.02:0,6,81	0/0:4,0:4:9.02:0,9,120	0/0:24,0:24:56.80:0,57,783	0/0:17,0:17:40.42:0,40,299	0/0:9,0:9:27.05:0,27,352	0/0:8,0:8:11.58:0,12,78	0/0:9,0:9:19.16:0,19,104	0/0:12,0:12:35.88:0,36,455	0/0:8,0:8:18:0,18,218	0/0:17,0:17:51.06:0,51,727	0/0:6,0:6:17.60:0,18,115	0/0:12,0:12:29.98:0,30,414	0/0:32,0:32:54.13:0,54,357	1/1:22,0:22:3.14:59,3,0	0/0:8,0:8:20.54:0,21,149	0/0:5,0:5:11.81:0,12,93	0/0:25,0:25:61.08:0,61,420	0/0:10,0:10:26.97:0,27,378	0/0:1,0:1:2.99:0,3,24	0/0:14,0:14:35.86:0,36,460	0/0:11,0:11:26.94:0,27,300	0/0:9,0:9:18.84:0,19,153	0/0:7,0:7:14.86:0,15,138	0/1:7,0:7:3.48:3,0,100
chr10	87230095	.	A	AT	15399.87	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-17.903;DP=739;FS=6.463;HRun=1;HaplotypeScore=65.1282;InbreedingCoeff=1.0000;MQ=86.31;MQ0=0;MQRankSum=-3.005;QD=41.29;ReadPosRankSum=-0.244;VQSLOD=5.1163;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,45:47:99:1933,129,0	1/1:1,13:14:33.11:495,33,0	0/0:24,0:24:63.20:0,63,796	0/0:23,0:23:56.51:0,57,737	0/0:29,0:29:81.26:0,81,1051	0/0:18,0:18:54.18:0,54,701	0/0:36,0:36:99:0,108,1386	1/1:0,30:30:90.29:1328,90,0	0/0:25,0:25:72.23:0,72,935	1/1:2,31:34:93.30:1372,93,0	1/1:0,17:17:51.17:765,51,0	0/0:30,0:30:87.28:0,87,1129	0/0:26,0:26:78.25:0,78,1012	0/0:27,0:27:81.26:0,81,1052	0/0:34,0:34:96.31:0,96,1246	0/0:27,0:27:81.25:0,81,1038	1/1:0,30:30:78.26:1169,78,0	1/1:0,24:24:66.22:989,66,0	1/1:1,17:18:51.17:763,51,0	1/1:0,23:23:63.17:919,63,0	1/1:1,43:44:99:1933,129,0	0/0:23,0:23:66.21:0,66,856	1/1:0,16:16:45.15:674,45,0	0/0:22,0:22:66.21:0,66,857	0/0:22,0:22:63.20:0,63,818	1/1:0,35:35:99:1531,105,0	1/1:1,20:20:53.97:809,54,0	1/1:0,20:20:48.16:719,48,0
chr10	87230739	.	G	GA	3782.23	PASS	AB=0.626;AC=15;AF=0.268;AN=56;BaseQRankSum=-9.694;DP=709;FS=0.347;HRun=11;HaplotypeScore=89.9910;InbreedingCoeff=0.7272;MQ=74.44;MQ0=0;MQRankSum=0.815;QD=18.45;ReadPosRankSum=-2.949;VQSLOD=3.1397;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:41:75.15:0,75,217	0/0:14,0:14:32.85:0,33,254	0/0:21,0:23:35.84:0,36,248	0/0:20,0:18:22.59:0,23,180	0/0:25,2:27:38.21:0,38,475	0/0:15,3:18:5.40:0,5,225	0/0:29,0:29:71.59:0,72,546	1/1:10,23:35:47.28:634,47,0	0/0:26,0:26:65.72:0,66,511	0/0:29,0:29:32.47:0,32,434	0/0:24,0:24:59.72:0,60,460	0/0:19,0:19:50.80:0,51,395	0/0:15,0:15:41.83:0,42,325	0/0:27,0:27:47.25:0,47,547	0/0:39,0:39:86.62:0,87,673	0/0:37,2:39:59.17:0,59,641	0/0:31,1:33:49.27:0,49,552	1/1:4,15:20:38.91:380,39,0	1/1:8,19:27:45.56:618,46,0	0/1:10,11:22:51.07:237,0,51	1/1:3,14:17:33.07:335,33,0	0/0:22,1:24:28.34:0,28,391	0/1:3,15:18:4.39:323,0,4	0/0:25,2:27:13.82:0,14,470	0/0:29,0:29:71.68:0,72,557	0/1:13,9:24:42.18:308,0,42	1/1:6,22:27:31.28:644,31,0	1/1:2,12:14:12.81:304,13,0
chr10	87231855	.	C	CT	4354.09	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-12.339;DP=531;FS=2.180;HRun=8;HaplotypeScore=51.8695;InbreedingCoeff=0.9778;MQ=62.99;MQ0=1;MQRankSum=0.375;QD=28.09;ReadPosRankSum=-1.649;VQSLOD=4.8233;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:68.86:0,69,613	0/0:12,0:12:30.01:0,30,275	0/0:8,0:6:5.99:0,6,53	0/0:12,0:11:18:0,18,165	0/0:18,0:18:48.02:0,48,439	0/0:17,0:17:44.96:0,45,399	0/0:16,0:16:45.02:0,45,412	1/1:6,28:34:84.20:937,84,0	0/0:16,0:16:45.02:0,45,412	0/0:29,0:29:78.04:0,78,710	0/0:11,0:11:30.02:0,30,275	0/0:18,0:18:39.01:0,39,353	0/0:15,0:15:44.99:0,45,401	0/0:17,0:17:48.02:0,48,439	0/0:20,0:20:57.02:0,57,518	0/0:27,0:27:75.02:0,75,682	0/0:26,0:26:47.54:0,48,554	0/0:19,0:19:48.02:0,48,439	1/1:3,15:18:42.11:476,42,0	1/1:1,21:22:63.19:727,63,0	1/1:2,8:10:21.06:242,21,0	0/0:10,0:10:27.01:0,27,244	0/0:21,0:21:57.03:0,57,522	0/0:9,0:9:24:0,24,215	0/0:26,0:26:66.02:0,66,601	1/1:5,25:30:26.28:788,26,0	1/1:4,25:28:44.75:769,45,0	1/1:0,12:12:36.11:415,36,0
chr10	87232035	.	C	CT	488.70	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.376;DP=578;FS=0.789;HRun=11;HaplotypeScore=79.5785;InbreedingCoeff=0.9544;MQ=69.27;MQ0=0;MQRankSum=0.707;QD=14.81;ReadPosRankSum=-0.233;VQSLOD=3.9960;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:37:58.12:0,58,579	0/0:9,0:9:17.91:0,18,139	0/0:16,0:17:18.56:0,19,163	0/0:16,0:14:21.89:0,22,143	0/0:27,0:27:65.69:0,66,506	0/0:18,0:17:38.80:0,39,297	0/0:16,0:17:41.10:0,41,320	0/0:41,0:42:85.06:0,85,623	0/0:13,0:14:31.92:0,32,238	0/0:14,0:14:38.80:0,39,296	0/0:16,0:16:26.53:0,27,208	0/0:17,0:19:49.85:0,50,377	0/0:19,0:19:41.80:0,42,325	0/0:20,0:21:52.82:0,53,399	0/0:17,0:17:8.47:0,8,248	0/0:16,0:16:47.81:0,48,370	0/0:31,0:32:70.64:0,71,532	1/1:2,16:18:39.08:396,39,0	0/0:23,0:23:57.76:0,58,416	0/0:26,0:26:72.20:0,72,556	0/0:25,0:25:59.75:0,60,463	0/0:11,0:11:29.12:0,29,216	1/1:4,11:15:21.04:213,21,0	0/0:22,0:22:59.75:0,60,464	0/0:17,0:17:38.84:0,39,302	0/0:28,0:29:55.22:0,55,470	0/0:27,0:27:57.55:0,58,442	0/0:13,0:13:25.94:0,26,191
chr10	87233118	.	ACTT	A	2521.98	PASS	AB=0.761;AC=15;AF=0.268;AN=56;BaseQRankSum=10.493;DP=677;FS=6.693;HRun=0;HaplotypeScore=115.1089;InbreedingCoeff=-0.1780;MQ=58.33;MQ0=20;MQRankSum=-6.017;QD=10.29;ReadPosRankSum=-2.900;VQSLOD=2.2953;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:5,17:20:58.81:453,0,59	0/1:3,5:8:34.12:34,0,108	0/0:26,0:15:18.60:0,19,654	0/0:41,0:23:50.81:0,51,811	0/0:27,0:27:81.24:0,81,1608	0/0:23,0:23:63.10:0,63,1162	0/0:32,0:32:87.19:0,87,1648	0/1:8,4:9:72.68:73,0,157	0/0:20,0:20:50.78:0,51,1036	0/1:8,7:15:99:240,0,114	0/1:10,5:15:99:116,0,172	0/0:35,0:35:95.80:0,96,1904	0/0:45,0:45:99:0,132,2438	0/0:34,0:33:87.27:0,87,1819	0/0:34,0:34:90.25:0,90,1834	0/0:30,0:29:78.24:0,78,1595	0/1:10,4:9:10.16:133,0,10	0/1:22,0:22:88.25:235,0,88	0/1:9,4:9:34.28:130,0,34	0/1:11,3:12:79.49:93,0,79	0/1:20,18:27:99:274,0,107	0/0:19,0:19:54.15:0,54,1070	0/1:16,0:16:18.09:147,0,18	0/0:46,0:46:99:0,132,2669	0/0:18,0:18:51.12:0,51,960	0/1:16,11:23:99:451,0,111	0/1:16,6:18:84.51:122,0,85	1/1:0,6:6:12.04:185,12,0
chr10	87233123	.	TTCC	T	2058.15	PASS	AB=0.966;AC=18;AF=0.321;AN=56;BaseQRankSum=12.034;DP=686;FS=13.699;HRun=0;HaplotypeScore=112.8149;InbreedingCoeff=0.1797;MQ=58.47;MQ0=17;MQRankSum=-4.100;QD=8.83;ReadPosRankSum=-0.336;VQSLOD=2.3855;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:21:28.77:205,0,29	0/1:8,0:8:15.85:16,0,57	0/0:30,0:16:39.64:0,40,713	0/0:45,0:25:56.52:0,57,926	0/0:27,0:27:75.19:0,75,1447	0/0:21,0:21:51.18:0,51,1083	0/0:34,0:33:81.13:0,81,1535	0/1:13,0:10:35.79:36,0,62	0/0:23,0:23:56.79:0,57,1080	0/1:13,0:13:32.13:132,0,32	0/1:13,0:13:63.49:94,0,63	0/0:39,0:39:98.74:0,99,1764	0/0:47,0:47:99:0,114,2197	0/0:37,0:36:99:0,105,1933	0/0:36,0:36:96.14:0,96,1801	0/0:31,0:30:75.21:0,75,1523	1/1:13,0:8:11.87:93,12,0	1/1:7,15:22:9.22:528,9,0	0/1:10,0:9:5.99:144,0,6	0/1:9,0:14:55.50:56,0,79	0/1:36,0:26:54.15:153,0,54	0/0:17,0:17:45.15:0,45,922	1/1:4,12:16:23.96:345,24,0	0/0:48,0:48:99:0,126,2473	0/0:17,0:17:45.12:0,45,892	0/1:23,1:20:83.09:243,0,83	0/1:19,0:15:47.42:96,0,47	1/1:6,0:6:11.94:99,12,0
chr10	87233368	.	AGTGCCTCCC	A	1228.03	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.007;DP=704;FS=0.000;HRun=0;HaplotypeScore=190.4457;InbreedingCoeff=0.9811;MQ=77.33;MQ0=1;MQRankSum=-6.548;QD=53.39;ReadPosRankSum=1.453;VQSLOD=3.0484;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,4235	0/0:7,0:7:21.07:0,21,931	0/0:21,0:20:60.16:0,60,2527	0/0:17,0:17:44.69:0,45,1870	0/0:19,0:19:54.19:0,54,2459	0/0:28,0:28:78.25:0,78,3585	0/0:32,0:32:93.32:0,93,4286	0/0:22,0:22:60.18:0,60,2623	0/0:24,0:24:72.25:0,72,3388	0/0:29,0:29:87.30:0,87,4077	0/0:16,0:16:42.14:0,42,1900	0/0:43,0:43:99:0,123,5830	0/0:32,0:32:87.30:0,87,4116	0/0:37,0:37:99:0,108,5128	0/0:26,0:26:72.25:0,72,3403	0/0:25,0:25:69.24:0,69,3230	0/0:52,0:50:99:0,148,6803	1/1:0,13:13:33.11:977,33,0	0/0:27,0:27:75.26:0,75,3538	0/0:18,0:18:51.18:0,51,2434	0/0:45,0:45:99:0,129,6094	0/0:15,0:15:39.13:0,39,1872	1/1:2,8:9:12.04:367,12,0	0/0:36,0:36:99:0,99,4491	0/0:17,0:17:51.18:0,51,2413	0/0:31,0:31:93.32:0,93,4426	0/0:16,0:16:48.16:0,48,2333	0/0:9,0:9:27.09:0,27,1247
chr10	87234455	.	CTGT	C	1416.78	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.730;DP=657;FS=0.000;HRun=0;HaplotypeScore=90.9057;InbreedingCoeff=0.9931;MQ=78.09;MQ0=0;MQRankSum=-1.907;QD=32.95;ReadPosRankSum=2.463;VQSLOD=4.1534;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.33:0,96,2077	0/0:8,0:8:21.07:0,21,455	0/0:25,0:25:60.21:0,60,1270	0/0:22,0:21:60.21:0,60,1207	0/0:17,0:17:42.13:0,42,868	0/0:13,0:13:36.12:0,36,759	0/0:29,0:29:81.26:0,81,1712	0/0:28,0:28:69.24:0,69,1485	0/0:24,0:24:72.20:0,72,1513	0/0:33,0:33:87.28:0,87,1785	0/0:11,0:11:33.11:0,33,707	0/0:28,0:28:78.27:0,78,1689	0/0:18,0:18:51.18:0,51,1095	0/0:29,0:29:84.27:0,84,1778	0/0:23,0:23:63.22:0,63,1364	0/0:27,0:27:63.18:0,63,1283	0/0:38,0:38:99:0,105,2265	1/1:2,26:28:69.23:1069,69,0	0/0:18,0:18:42.14:0,42,894	0/0:9,0:9:18.06:0,18,382	0/0:59,0:59:99:0,163,3404	0/0:17,0:17:48.16:0,48,1039	1/1:2,13:15:30.10:469,30,0	0/0:30,0:30:87.30:0,87,1868	0/0:23,0:23:69.24:0,69,1494	0/0:25,0:25:63.22:0,63,1357	0/0:13,0:13:33.11:0,33,714	0/0:13,0:13:36.12:0,36,777
chr10	87235527	.	TTGGCAG	T	1608.26	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.171;DP=486;FS=2.746;HRun=0;HaplotypeScore=145.9324;InbreedingCoeff=0.9084;MQ=77.71;MQ0=0;MQRankSum=-6.409;QD=48.74;ReadPosRankSum=0.205;VQSLOD=3.8263;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.19:0,66,2130	1/1:0,2:2:6.02:105,6,0	0/0:14,0:14:27.41:0,27,983	0/0:9,0:9:24.08:0,24,832	0/0:11,0:11:24.06:0,24,671	0/0:9,0:9:24.08:0,24,833	0/0:34,0:34:93.32:0,93,3075	0/0:25,0:25:69.23:0,69,2254	0/0:17,0:17:48.16:0,48,1583	1/1:3,9:11:33.11:675,33,0	1/1:0,4:4:12.04:279,12,0	0/0:23,0:23:57.03:0,57,1876	0/0:13,0:13:39.13:0,39,1287	0/0:25,0:25:72.25:0,72,2512	0/0:33,0:33:87.28:0,87,2885	0/0:16,0:16:48.16:0,48,1662	1/1:5,10:15:30.10:699,30,0	0/0:25,0:25:75.26:0,75,2543	0/0:28,0:28:78.25:0,78,2483	0/0:8,0:8:24.03:0,24,695	0/0:50,0:50:99:0,123,4217	0/0:12,0:12:36.12:0,36,1220	0/0:6,0:6:18.06:0,18,581	0/0:20,0:20:57.20:0,57,2014	0/0:13,0:13:36.12:0,36,1181	0/0:14,0:14:36.12:0,36,1265	0/0:20,0:20:51.18:0,51,1753	0/0:2,0:2:2.85:0,3,106
chr10	87236044	.	CGTGAGTGGAGGGA	C	12654.39	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=13.799;DP=524;FS=10.408;HRun=0;HaplotypeScore=196.8014;InbreedingCoeff=0.9837;MQ=81.74;MQ0=0;MQRankSum=-13.338;QD=59.41;ReadPosRankSum=-0.686;VQSLOD=3.7366;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,22:29:45.15:1736,45,0	1/1:2,8:10:21.07:821,21,0	0/0:20,0:20:57.20:0,57,2736	0/0:26,0:24:50.95:0,51,2346	0/0:20,0:20:48.16:0,48,2762	0/0:25,0:25:69.24:0,69,4444	0/0:19,0:19:57.20:0,57,3687	1/1:9,7:16:18.03:444,18,0	0/0:26,0:26:69.24:0,69,4210	1/1:2,9:11:27.09:1015,27,0	1/1:1,6:7:15.05:574,15,0	0/0:34,0:34:96.29:0,96,5577	0/0:19,0:19:51.18:0,51,3202	0/0:11,0:11:33.11:0,33,2086	0/0:26,0:26:72.25:0,72,4234	0/0:28,0:28:84.29:0,84,5437	1/1:3,18:21:39.13:1479,39,0	1/1:5,10:15:21.07:822,21,0	1/1:6,6:12:14.98:302,15,0	1/1:3,8:11:21.07:743,21,0	1/1:15,16:31:30.57:1174,31,0	0/0:8,0:8:24.08:0,24,1500	1/1:2,7:9:9.03:352,9,0	0/0:26,0:26:69.24:0,69,4273	0/0:23,0:23:63.20:0,63,3257	1/1:3,10:12:27.07:962,27,0	1/1:5,13:17:36.12:1408,36,0	1/1:1,8:9:21.07:822,21,0
chr10	87236182	.	C	CT	751.55	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.070;DP=510;FS=3.845;HRun=8;HaplotypeScore=58.7494;InbreedingCoeff=0.9649;MQ=58.16;MQ0=1;MQRankSum=0.802;QD=22.77;ReadPosRankSum=1.434;VQSLOD=4.3633;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:90.03:0,90,821	0/0:13,0:13:36.02:0,36,330	0/0:11,0:9:23.99:0,24,212	0/0:7,0:6:15.01:0,15,136	0/0:15,0:15:42.02:0,42,384	0/0:25,0:25:69.02:0,69,631	0/0:16,0:16:38.99:0,39,351	0/0:29,0:29:62.96:0,63,563	0/0:16,0:16:39.01:0,39,356	0/0:22,0:22:57:0,57,517	0/0:12,0:12:36.02:0,36,329	0/0:22,0:22:48.01:0,48,438	0/0:14,0:14:36.02:0,36,329	0/0:8,0:8:24:0,24,215	0/0:28,0:28:72.02:0,72,656	0/0:19,0:19:48.01:0,48,434	0/0:28,0:28:75.04:0,75,686	1/1:2,26:27:64.43:730,64,0	0/0:19,0:19:42.01:0,42,384	0/0:27,0:27:81.04:0,81,741	0/0:11,0:11:33:0,33,296	0/0:5,0:5:15:0,15,133	1/1:1,4:5:12.04:138,12,0	0/0:16,0:16:36.02:0,36,329	0/0:27,0:27:75.04:0,75,686	0/0:17,0:17:48.03:0,48,439	0/0:19,0:19:51.02:0,51,466	0/0:14,0:14:33.01:0,33,302
chr10	87236333	.	TTA	T	98.33	PASS	AB=0.800;AC=2;AF=0.036;AN=56;BaseQRankSum=3.727;DP=504;FS=6.802;HRun=0;HaplotypeScore=66.2218;InbreedingCoeff=-0.0462;MQ=47.10;MQ0=45;MQRankSum=-3.000;QD=4.10;ReadPosRankSum=-1.058;VQSLOD=0.6947;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:26:75.26:0,75,1518	0/0:8,0:8:24.08:0,24,472	0/0:9,0:4:12.04:0,12,228	0/0:11,0:2:6.02:0,6,106	0/0:20,0:20:45.15:0,45,881	0/0:24,0:23:69.24:0,69,1374	0/0:21,0:21:60.21:0,60,1175	0/0:30,0:28:81.28:0,81,1640	0/0:23,0:23:60.21:0,60,1187	0/0:15,0:13:39.13:0,39,792	0/0:2,0:2:6.02:0,6,97	0/0:17,0:17:48.16:0,48,953	0/0:19,0:17:39.09:0,39,751	0/0:11,0:11:33.11:0,33,667	0/0:26,0:26:75.26:0,75,1506	0/0:31,0:27:84.29:0,84,1674	0/0:21,0:19:51.17:0,51,997	0/1:11,2:11:62.12:62,0,399	0/0:19,0:19:51.17:0,51,1011	0/0:21,0:21:63.21:0,63,1204	0/0:22,0:15:42.14:0,42,833	0/0:7,0:7:21.07:0,21,426	0/1:7,4:10:99:125,0,123	0/0:19,0:17:48.16:0,48,938	0/0:16,0:15:42.14:0,42,823	0/0:23,0:19:57.15:0,57,1093	0/0:19,0:17:48.12:0,48,915	0/0:14,0:10:27.09:0,27,548
chr10	87236435	.	A	AGG	2503.65	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=10.472;DP=554;FS=1.113;HRun=6;HaplotypeScore=82.3854;InbreedingCoeff=0.9979;MQ=79.48;MQ0=0;MQRankSum=-2.297;QD=12.77;ReadPosRankSum=-1.016;VQSLOD=-0.3147;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,35:37:84.29:1418,84,0	0/0:16,0:16:39.12:0,39,476	0/0:18,0:18:31.09:0,31,369	0/0:18,0:18:43.90:0,44,463	0/0:15,0:15:36.09:0,36,426	0/0:15,0:15:39.12:0,39,476	0/0:23,0:24:54.64:0,55,740	1/1:1,0:18:41.13:187,41,0	0/0:26,0:26:72.22:0,72,877	0/0:15,0:15:45.13:0,45,539	0/0:11,0:11:33.10:0,33,402	0/0:24,0:24:57.17:0,57,695	0/0:18,0:18:48.15:0,48,584	0/0:19,0:19:51.15:0,51,610	0/0:28,0:28:81.25:0,81,987	0/0:32,0:32:84.17:0,84,991	0/0:18,0:18:51.13:0,51,606	1/1:0,0:12:30.05:106,30,0	1/1:2,0:25:59.03:242,59,0	1/1:4,0:16:24.95:87,25,0	1/1:2,0:27:59.89:210,60,0	0/0:15,0:15:30.09:0,30,365	1/1:0,0:11:27.45:97,27,0	0/0:30,0:30:81.24:0,81,988	0/0:16,0:16:45.14:0,45,548	1/1:1,0:16:37.31:131,37,0	1/1:2,0:23:52.40:184,52,0	1/1:1,0:11:17.47:61,17,0
chr10	87236705	.	A	AT	329.63	PASS	AB=0.958;AC=8;AF=0.143;AN=56;BaseQRankSum=-3.544;DP=620;FS=0.635;HRun=14;HaplotypeScore=73.6534;InbreedingCoeff=0.3481;MQ=70.87;MQ0=2;MQRankSum=-0.851;QD=3.36;ReadPosRankSum=-3.281;VQSLOD=-0.3309;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,1:48:57.06:0,57,577	0/0:18,0:18:15.57:0,16,192	0/1:17,0:12:8.73:9,0,54	0/1:17,0:15:3.86:4,0,42	0/0:20,0:20:2.93:0,3,247	0/0:26,1:32:46.74:0,47,399	0/0:30,0:30:70.87:0,71,461	0/0:28,1:31:30.20:0,30,298	0/0:18,0:18:34.95:0,35,230	0/0:20,0:21:16.48:0,16,101	0/0:12,0:12:17.55:0,18,112	0/1:24,0:24:8.97:9,0,194	0/0:18,0:18:13.76:0,14,190	0/0:16,0:16:26.40:0,26,173	0/0:22,0:22:38.32:0,38,247	0/0:28,0:29:43.20:0,43,273	0/0:36,0:37:53.83:0,54,442	1/1:4,17:21:6.45:304,6,0	0/0:18,0:19:34.46:0,34,217	0/0:18,0:18:38.05:0,38,239	0/0:31,0:34:68.27:0,68,408	0/0:13,1:15:2.26:0,2,132	1/1:4,7:11:14.88:116,15,0	0/0:21,0:23:40.53:0,41,305	0/0:10,0:10:20.65:0,21,135	0/0:30,0:30:40.38:0,40,334	0/0:19,0:21:31.45:0,31,195	0/1:4,1:5:17.46:17,0,30
chr10	87240430	.	GGTAGGA	G	8212.18	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.497;DP=546;FS=8.668;HRun=0;HaplotypeScore=116.8638;InbreedingCoeff=0.9948;MQ=92.00;MQ0=0;MQRankSum=-15.311;QD=59.08;ReadPosRankSum=-0.784;VQSLOD=4.7492;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:21:54.18:1341,54,0	0/0:6,0:6:15.05:0,15,564	0/0:26,0:26:75.26:0,75,2719	0/0:25,0:26:67.89:0,68,2361	0/0:13,0:13:36.12:0,36,1316	0/0:17,0:17:51.18:0,51,1913	0/0:23,0:23:69.24:0,69,2591	1/1:0,8:8:18.03:461,18,0	0/0:23,0:23:63.22:0,63,2298	0/0:21,0:21:63.22:0,63,2339	0/0:21,0:21:60.21:0,60,2227	0/0:23,0:23:69.24:0,69,2528	0/0:13,0:13:39.12:0,39,1366	0/0:30,0:30:87.28:0,87,3134	0/0:27,0:27:81.28:0,81,3008	0/0:28,0:28:84.29:0,84,3173	0/0:42,0:42:99:0,123,4626	1/1:0,9:9:24.08:543,24,0	1/1:1,8:9:24.08:615,24,0	1/1:1,11:12:27.09:667,27,0	1/1:0,26:26:48.55:1035,49,0	0/0:10,0:10:30.10:0,30,1127	1/1:1,11:12:27.09:690,27,0	0/0:41,0:41:99:0,120,4378	0/0:17,0:17:51.18:0,51,1857	1/1:2,15:17:51.15:1251,51,0	1/1:1,13:14:42.14:1071,42,0	1/1:0,11:11:21.07:538,21,0
chr10	87240431	.	GTAGGA	G	4048.02	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.473;DP=544;FS=7.912;HRun=0;HaplotypeScore=120.8443;InbreedingCoeff=0.9948;MQ=92.73;MQ0=0;MQRankSum=-15.352;QD=29.33;ReadPosRankSum=-0.401;VQSLOD=2.7241;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,1:21:51.63:649,52,0	0/0:6,0:6:15.05:0,15,500	0/0:26,0:26:75.26:0,75,2409	0/0:27,0:27:67.88:0,68,2134	0/0:13,0:13:36.12:0,36,1170	0/0:17,0:17:51.18:0,51,1696	0/0:23,0:23:69.24:0,69,2289	1/1:8,0:8:18.06:228,18,0	0/0:23,0:23:63.20:0,63,2012	0/0:21,0:21:63.22:0,63,2073	0/0:21,0:21:60.21:0,60,1972	0/0:23,0:23:69.22:0,69,2219	0/0:13,0:13:36.12:0,36,1182	0/0:29,0:29:84.29:0,84,2734	0/0:27,0:27:81.28:0,81,2656	0/0:28,0:28:84.29:0,84,2797	0/0:41,0:41:99:0,123,4094	1/1:9,0:9:23.98:267,24,0	1/1:8,0:8:24.08:304,24,0	1/1:11,0:12:27.09:342,27,0	1/1:26,0:26:42.14:494,42,0	0/0:10,0:10:30.10:0,30,998	1/1:11,1:12:27.09:345,27,0	0/0:41,0:41:99:0,120,3915	0/0:17,0:17:51.16:0,51,1624	1/1:15,2:17:48.15:617,48,0	1/1:13,1:14:42.14:538,42,0	1/1:11,0:11:21.07:266,21,0
chr10	87241294	.	C	CA	12641.32	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=18.271;DP=654;FS=5.323;HRun=0;HaplotypeScore=83.0237;InbreedingCoeff=0.9973;MQ=89.72;MQ0=0;MQRankSum=-7.279;QD=40.52;ReadPosRankSum=3.095;VQSLOD=5.5579;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,41:43:99:1713,114,0	1/1:0,8:8:24.08:360,24,0	0/0:27,0:27:75.09:0,75,982	0/0:31,0:31:78.19:0,78,1021	0/0:12,0:12:36.08:0,36,480	0/0:15,0:15:45.15:0,45,626	0/0:35,0:35:99:0,105,1468	1/1:0,22:22:66.19:949,66,0	0/0:21,0:21:63.19:0,63,848	1/1:1,23:24:69.23:991,69,0	1/1:0,14:14:39.13:585,39,0	0/0:27,0:27:78.26:0,78,1085	0/0:23,0:23:69.23:0,69,962	0/0:28,0:28:84.28:0,84,1164	0/0:30,0:30:90.29:0,90,1243	0/0:27,0:27:81.25:0,81,1100	1/1:1,41:42:99:1625,108,0	1/1:0,30:30:81.27:1219,81,0	1/1:1,24:25:67.48:1063,67,0	1/1:0,11:11:30.10:452,30,0	1/1:2,33:35:84.28:1265,84,0	0/0:20,0:20:60.20:0,60,834	1/1:2,8:10:26.76:363,27,0	0/0:30,0:30:87.29:0,87,1216	0/0:16,0:16:45.15:0,45,619	1/1:0,24:24:72.23:1065,72,0	1/1:0,17:17:51.17:766,51,0	1/1:0,7:7:15.05:225,15,0
chr10	87242550	.	TA	T	1018.27	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.574;DP=680;FS=4.747;HRun=7;HaplotypeScore=70.0623;InbreedingCoeff=0.9624;MQ=70.12;MQ0=2;MQRankSum=-1.477;QD=20.78;ReadPosRankSum=1.850;VQSLOD=3.3526;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1160	0/0:16,0:16:42.12:0,42,493	0/0:15,0:8:9.21:0,9,113	0/0:22,0:13:14.31:0,14,104	0/0:16,0:16:42.05:0,42,482	0/0:28,0:28:75.19:0,75,871	0/0:21,0:21:56.75:0,57,657	0/0:34,0:33:88.09:0,88,973	0/0:19,0:18:45.14:0,45,551	0/0:26,0:26:72.19:0,72,846	0/0:22,0:22:41.70:0,42,565	0/0:35,0:35:87.22:0,87,1015	0/0:22,0:22:66.19:0,66,784	0/0:22,0:22:66.15:0,66,748	0/0:22,0:22:58.98:0,59,679	0/0:19,0:19:54.16:0,54,648	0/0:34,0:34:93.27:0,93,1124	1/1:3,28:31:72.07:729,72,0	0/0:20,0:20:57.12:0,57,632	0/0:24,0:24:69.18:0,69,810	0/0:27,0:27:69.17:0,69,799	0/0:32,0:32:83.67:0,84,955	1/1:4,14:18:42:411,42,0	0/0:18,0:18:54.12:0,54,614	0/0:26,0:26:63.34:0,63,749	0/0:31,0:31:75.19:0,75,858	0/0:30,0:30:65.58:0,66,770	0/0:15,0:15:30.09:0,30,367
chr10	87243070	.	A	AGTTGAC	1997.17	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.606;DP=764;FS=1.808;HRun=0;HaplotypeScore=156.3223;InbreedingCoeff=0.9983;MQ=79.40;MQ0=0;MQRankSum=-7.794;QD=62.41;ReadPosRankSum=1.694;VQSLOD=4.2374;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,153,3383	0/0:15,0:15:39.13:0,39,855	0/0:40,0:40:99:0,102,2264	0/0:28,0:28:71.84:0,72,1588	0/0:21,0:21:54.19:0,54,1207	0/0:15,0:15:42.13:0,42,915	0/0:26,0:26:72.22:0,72,1486	0/0:43,0:43:99:0,117,2540	0/0:24,0:24:60.21:0,60,1349	0/0:33,0:33:93.32:0,93,2101	0/0:18,0:18:51.18:0,51,1165	0/0:24,0:24:66.21:0,66,1464	0/0:24,0:24:69.22:0,69,1505	0/0:15,0:15:42.14:0,42,955	0/0:31,0:31:84.27:0,84,1868	0/0:40,0:40:99:0,114,2603	0/0:41,0:41:99:0,117,2646	1/1:3,11:14:26.97:872,27,0	0/0:26,0:26:69.16:0,69,1420	0/0:18,0:18:51.18:0,51,1165	0/0:44,0:44:99:0,120,2662	0/0:29,0:29:81.24:0,81,1740	1/1:3,13:18:36.12:1247,36,0	0/0:27,0:27:72.25:0,72,1632	0/0:20,0:20:57.20:0,57,1235	0/0:28,0:28:84.26:0,84,1828	0/0:38,0:38:99:0,111,2489	0/0:8,0:8:24.08:0,24,501
chr10	87243950	.	A	AG	9244.14	PASS	AB=0.989;AC=52;AF=0.929;AN=56;BaseQRankSum=2.642;DP=601;FS=15.007;HRun=1;HaplotypeScore=215.4892;InbreedingCoeff=-0.0875;MQ=81.51;MQ0=0;MQRankSum=2.798;QD=15.38;ReadPosRankSum=8.987;VQSLOD=2.4960;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:49,1:50:99:894,116,0	1/1:7,0:7:17.69:117,18,0	1/1:21,1:22:12.57:201,13,0	0/1:17,0:16:20.66:175,0,21	0/1:20,1:21:2.51:292,0,3	1/1:19,0:19:3.38:231,3,0	1/1:27,0:27:61.69:397,62,0	0/1:29,0:29:40.55:323,0,41	1/1:19,0:19:55.93:364,56,0	1/1:23,0:23:21.65:316,22,0	1/1:12,0:12:32.46:242,32,0	1/1:15,0:15:40.99:250,41,0	1/1:24,0:24:67.11:429,67,0	1/1:27,0:27:76.15:471,76,0	1/1:18,0:18:52.38:302,52,0	1/1:17,0:17:16.02:217,16,0	1/1:24,0:24:48.72:415,49,0	1/1:23,0:23:67.66:436,68,0	1/1:11,0:11:4.51:141,5,0	1/1:17,0:17:48.03:308,48,0	1/1:35,0:35:42.92:521,43,0	1/1:12,0:12:6.20:128,6,0	1/1:22,1:23:45.22:428,45,0	1/1:27,0:27:23.82:353,24,0	1/1:18,0:18:30.07:292,30,0	1/1:23,1:24:50.26:421,50,0	1/1:21,0:21:40.93:361,41,0	0/1:19,0:19:25.75:220,0,26
chr10	87245639	.	CA	C	1116.22	PASS	AB=0.839;AC=34;AF=0.607;AN=56;BaseQRankSum=2.426;DP=506;FS=4.867;HRun=17;HaplotypeScore=63.7433;InbreedingCoeff=0.2779;MQ=51.67;MQ0=27;MQRankSum=-0.937;QD=2.70;ReadPosRankSum=2.608;VQSLOD=-0.7612;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,3:27:17.86:18,0,125	1/1:2,5:7:11.68:67,12,0	1/1:12,0:4:2.06:10,2,0	0/0:13,0:5:7.58:0,8,45	0/1:21,2:25:29.05:29,0,147	0/0:13,3:17:6.27:0,6,159	0/1:21,2:23:4.86:5,0,226	1/1:14,2:26:16.95:58,17,0	0/1:11,0:10:3.41:3,0,79	1/1:3,14:18:31.44:225,31,0	1/1:5,7:12:16.54:89,17,0	0/0:16,0:15:14.01:0,14,102	0/1:9,2:11:6.89:38,0,7	0/0:9,0:7:8.97:0,9,70	0/0:22,0:20:25.86:0,26,247	0/0:12,0:12:11.06:0,11,104	1/1:16,19:34:31.65:215,32,0	0/1:12,9:17:0.30:67,0,0	1/1:14,0:25:28.47:82,28,0	1/1:9,0:16:12.10:34,12,0	1/1:7,0:15:14.23:41,14,0	0/1:5,3:8:26.64:27,0,71	0/1:9,2:11:21.60:22,0,31	0/1:10,0:10:4.26:4,0,74	0/1:15,8:27:20.81:71,0,21	1/1:10,1:21:20.87:76,21,0	1/1:8,1:18:27.09:86,27,0	1/1:5,0:12:10.41:32,10,0
chr10	87246779	.	AT	A	2339.97	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.131;DP=498;FS=13.110;HRun=9;HaplotypeScore=72.0069;InbreedingCoeff=0.9576;MQ=73.81;MQ0=3;MQRankSum=-1.090;QD=18.42;ReadPosRankSum=-1.648;VQSLOD=2.2472;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:72.20:0,72,814	0/0:7,0:7:18.94:0,19,208	0/0:29,2:19:11.09:0,11,187	0/0:11,0:10:7.58:0,8,73	0/0:25,0:25:63.14:0,63,696	0/0:17,0:17:39.12:0,39,450	0/0:12,0:12:29.95:0,30,318	1/1:15,7:20:38.89:339,39,0	0/0:10,0:10:24.07:0,24,276	0/0:24,0:23:57.16:0,57,643	0/0:17,0:17:42.12:0,42,483	0/0:17,0:17:42.11:0,42,473	0/0:14,0:14:39.10:0,39,440	0/0:13,0:13:36.10:0,36,405	0/0:27,0:27:75.22:0,75,855	0/0:18,0:18:44.36:0,44,345	0/0:24,0:24:59.22:0,59,644	0/0:20,0:20:38.56:0,39,355	1/1:8,8:15:35.85:327,36,0	1/1:5,19:24:66.01:593,66,0	1/1:2,3:5:11.98:104,12,0	0/0:4,0:4:9.03:0,9,104	0/0:20,0:20:50.45:0,50,425	0/0:12,0:12:30.09:0,30,346	0/0:19,0:19:48.12:0,48,540	1/1:5,21:26:16.18:493,16,0	1/1:5,15:20:59.79:517,60,0	1/1:2,12:14:18.01:162,18,0
chr10	87246789	.	CTT	C	2209.14	PASS	AB=0.706;AC=13;AF=0.232;AN=56;BaseQRankSum=10.185;DP=480;FS=7.790;HRun=11;HaplotypeScore=75.6919;InbreedingCoeff=0.8539;MQ=66.54;MQ0=7;MQRankSum=-3.032;QD=18.26;ReadPosRankSum=-0.234;VQSLOD=2.3199;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:73.45:0,73,971	0/0:7,0:7:17.89:0,18,245	0/0:30,0:11:15.48:0,15,142	0/0:14,0:12:22.03:0,22,221	0/0:23,0:24:62.65:0,63,821	0/0:15,0:15:39.12:0,39,580	0/0:9,0:10:29.54:0,30,398	1/1:8,12:17:39.03:395,39,0	0/0:11,0:11:30.09:0,30,429	0/0:20,0:19:51.14:0,51,759	0/0:17,0:17:36.07:0,36,506	0/0:14,0:14:33.03:0,33,454	0/0:15,0:15:36.01:0,36,454	0/0:13,0:13:30.04:0,30,415	0/0:27,0:27:66.16:0,66,962	0/0:3,0:18:29.82:0,30,102	0/0:23,0:24:62.51:0,63,854	0/0:1,0:19:35.16:0,35,130	1/1:7,8:14:29.97:296,30,0	1/1:5,18:23:57.09:579,57,0	1/1:3,2:5:12:118,12,0	0/0:2,0:2:3.01:0,3,46	0/0:3,0:18:31.98:0,32,109	0/0:12,0:12:27.09:0,27,416	0/0:19,0:19:48.15:0,48,694	0/1:14,10:24:39.64:344,0,40	1/1:8,13:21:50.99:506,51,0	1/1:8,5:13:15.03:157,15,0
chr10	87247067	.	TTTG	T	1644.12	PASS	AB=0.942;AC=14;AF=0.250;AN=56;BaseQRankSum=0.949;DP=600;FS=0.421;HRun=0;HaplotypeScore=104.9138;InbreedingCoeff=-0.1770;MQ=53.76;MQ0=2;MQRankSum=-4.604;QD=5.91;ReadPosRankSum=-6.425;VQSLOD=0.0314;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:99:0,99,1886	0/1:3,3:6:16.99:180,0,17	0/0:20,0:10:9.20:0,9,300	0/0:11,0:6:0.11:0,0,41	0/0:29,0:29:78.13:0,78,1416	0/0:16,0:16:44.96:0,45,761	0/0:25,0:24:29.07:0,29,1048	0/1:26,0:24:87.99:138,0,88	0/0:19,0:19:50.94:0,51,824	0/1:35,6:40:99:458,0,327	0/1:22,4:26:99:267,0,193	0/0:18,0:18:48.08:0,48,930	0/0:14,0:14:36.73:0,37,729	0/0:14,0:14:41.88:0,42,624	0/0:26,0:25:75.17:0,75,1332	0/0:18,0:18:50.99:0,51,812	0/1:39,5:43:99:384,0,500	1/1:20,0:20:7.64:54,8,0	0/1:17,0:17:8.15:8,0,244	0/1:12,0:12:46.41:46,0,65	0/1:17,0:17:10.44:10,0,95	0/0:9,0:9:27.09:0,27,462	0/1:19,0:19:29.08:29,0,32	0/0:35,0:35:85.13:0,85,1719	0/0:33,0:33:87.23:0,87,1615	0/1:22,0:21:99:121,0,153	0/1:18,0:17:82.77:83,0,99	0/1:10,0:9:21.59:22,0,53
chr10	87247068	.	TTG	T	2049.52	PASS	AB=0.997;AC=20;AF=0.357;AN=56;BaseQRankSum=6.694;DP=591;FS=3.764;HRun=0;HaplotypeScore=91.7998;InbreedingCoeff=0.3279;MQ=53.74;MQ0=2;MQRankSum=-5.836;QD=7.24;ReadPosRankSum=-4.410;VQSLOD=2.2466;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:99:0,99,1551	0/1:6,0:6:2.77:115,0,3	0/0:18,0:10:8.54:0,9,236	0/1:11,0:6:2.53:3,0,26	0/0:28,0:28:81.14:0,81,1188	0/0:16,0:16:44.94:0,45,613	0/0:27,0:26:32.04:0,32,837	1/1:25,1:24:18.30:257,18,0	0/0:19,0:19:50.81:0,51,666	0/1:41,0:40:99:351,0,118	0/1:25,0:25:48.83:242,0,49	0/0:18,0:18:48.08:0,48,746	0/0:15,0:15:43.88:0,44,618	0/0:14,0:14:41.87:0,42,532	0/0:26,0:25:75.16:0,75,1139	0/0:20,0:20:56.98:0,57,739	0/1:42,1:42:99:279,0,202	1/1:17,3:20:37.33:275,37,0	0/1:16,0:16:43.09:43,0,88	1/1:12,0:12:4.18:77,4,0	0/1:16,0:16:28.48:29,0,28	0/0:9,0:9:27.08:0,27,393	1/1:18,0:18:17.46:193,17,0	0/0:34,0:34:72.32:0,72,1385	0/0:29,0:29:87.26:0,87,1328	0/1:21,0:20:37.50:177,0,38	1/1:18,0:17:2.98:115,3,0	1/1:10,0:9:1.89:73,2,0
chr10	87247069	.	TG	T	3865.15	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=8.894;DP=589;FS=2.482;HRun=1;HaplotypeScore=77.0382;InbreedingCoeff=0.8923;MQ=53.75;MQ0=2;MQRankSum=-3.780;QD=13.66;ReadPosRankSum=-4.367;VQSLOD=1.2503;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:99:0,99,1183	1/1:6,0:6:10.59:109,11,0	0/0:18,0:10:0.83:0,1,164	0/1:11,0:6:11.11:17,0,11	0/0:28,0:28:81.08:0,81,930	0/0:16,0:16:44.79:0,45,477	0/0:27,0:26:37.59:0,38,664	1/1:26,0:24:54.30:412,54,0	0/0:17,0:17:50.71:0,51,511	1/1:40,1:40:62.72:530,63,0	1/1:24,1:25:46.55:344,47,0	0/0:16,0:16:48.08:0,48,573	0/0:15,0:15:44.36:0,44,482	0/0:14,0:14:41.87:0,42,439	0/0:26,0:25:75.04:0,75,887	0/0:20,0:20:56.74:0,57,575	1/1:41,1:41:47.38:371,47,0	1/1:4,16:20:38.82:437,39,0	1/1:14,1:15:19.75:162,20,0	1/1:12,0:12:28.08:188,28,0	1/1:16,0:16:13.33:91,13,0	0/0:10,0:10:29.92:0,30,315	1/1:8,10:18:35.13:438,35,0	0/0:34,1:35:72.81:0,73,1101	0/0:29,0:29:87.22:0,87,1040	1/1:23,0:21:41.32:315,41,0	1/1:16,2:17:40.52:295,41,0	1/1:10,0:9:22.21:156,22,0
chr10	87247935	.	TGAA	T	878.03	PASS	AB=0.929;AC=9;AF=0.167;AN=54;BaseQRankSum=5.599;DP=337;FS=3.661;HRun=0;HaplotypeScore=55.4759;InbreedingCoeff=0.7635;MQ=73.53;MQ0=1;MQRankSum=1.913;QD=17.56;ReadPosRankSum=2.042;VQSLOD=3.2694;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:45.15:0,45,892	1/1:0,2:2:6.02:87,6,0	0/0:22,0:18:20.22:0,20,422	0/0:21,0:18:14.33:0,14,208	0/1:12,1:13:13.29:13,0,507	0/0:11,0:11:18.06:0,18,367	0/0:14,0:14:39.09:0,39,726	0/0:10,0:10:18.06:0,18,320	0/0:14,0:14:36.12:0,36,713	1/1:3,9:12:27.07:349,27,0	1/1:3,5:8:15:192,15,0	0/0:14,0:14:33.11:0,33,652	0/0:6,0:6:12.04:0,12,223	0/0:9,0:9:24.07:0,24,431	0/0:17,0:17:30.09:0,30,558	0/0:9,0:9:24.06:0,24,420	1/1:4,11:15:27.09:390,27,0	0/0:10,0:10:24.05:0,24,401	0/0:5,0:5:6.02:0,6,110	0/0:16,0:16:30.55:0,31,519	0/0:24,0:24:45.11:0,45,843	0/0:13,0:13:30.10:0,30,579	0/0:8,0:8:15.04:0,15,259	0/0:18,0:18:51.09:0,51,876	0/0:5,0:5:6.01:0,6,87	0/0:12,0:12:33.11:0,33,664	0/0:4,0:4:12.03:0,12,197	./.
chr10	87249855	.	CTTTATTTA	C	13499.28	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=16.357;DP=508;FS=5.625;HRun=0;HaplotypeScore=154.5443;InbreedingCoeff=0.9837;MQ=77.38;MQ0=0;MQRankSum=-15.312;QD=56.96;ReadPosRankSum=2.072;VQSLOD=4.4186;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:23:48.16:1287,48,0	1/1:0,11:11:30.10:818,30,0	0/0:13,0:13:33.11:0,33,1153	0/0:22,0:22:60.18:0,60,2245	0/0:23,0:23:66.23:0,66,2873	0/0:30,0:30:87.28:0,87,3642	0/0:24,0:24:63.22:0,63,2677	1/1:5,14:19:39.10:1028,39,0	0/0:19,0:19:54.17:0,54,2206	1/1:11,16:27:48.15:1251,48,0	1/1:0,16:16:27.09:733,27,0	0/0:12,0:12:36.11:0,36,1475	0/0:15,0:15:42.14:0,42,1674	0/0:16,0:16:42.14:0,42,1816	0/0:17,0:17:51.18:0,51,2165	0/0:22,0:22:66.23:0,66,2875	1/1:3,13:16:30.10:810,30,0	1/1:0,7:7:18.06:504,18,0	1/1:5,12:17:36.05:867,36,0	1/1:0,25:25:48.16:1317,48,0	1/1:1,6:7:6.02:141,6,0	0/0:22,0:22:63.22:0,63,2652	1/1:2,13:15:21.07:576,21,0	0/0:20,0:20:60.21:0,60,2548	0/0:16,0:16:45.15:0,45,1943	1/1:2,26:28:78.26:2070,78,0	1/1:0,14:14:39.13:1091,39,0	1/1:0,12:12:36.12:1007,36,0
chr10	87250656	.	TAA	T	2710.14	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=3.509;DP=535;FS=1.826;HRun=14;HaplotypeScore=74.1072;InbreedingCoeff=0.9621;MQ=65.69;MQ0=1;MQRankSum=-0.227;QD=17.26;ReadPosRankSum=0.974;VQSLOD=3.0749;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:22:50.62:0,51,634	0/0:8,0:9:27.09:0,27,365	0/0:29,0:13:15.32:0,15,149	0/0:20,1:12:5.17:0,5,131	0/0:23,0:26:56.39:0,56,657	0/0:7,0:9:21.06:0,21,258	0/0:12,0:15:33.91:0,34,331	1/1:6,26:34:31.71:622,32,0	0/0:16,0:19:47.11:0,47,561	0/0:25,0:27:55.39:0,55,655	0/0:16,0:17:38.56:0,39,486	0/0:12,0:15:33.02:0,33,379	0/0:10,0:12:29.57:0,30,361	0/0:12,0:16:40.53:0,41,425	0/0:13,0:15:38.10:0,38,476	0/0:28,0:32:72.11:0,72,886	0/0:20,0:24:65.53:0,66,724	0/0:17,0:20:59.52:0,60,696	1/1:7,13:21:41.71:365,42,0	1/1:9,12:21:32.90:298,33,0	1/1:0,5:5:15.02:139,15,0	0/0:8,0:9:26.58:0,27,345	0/0:11,0:13:33.05:0,33,413	0/0:6,0:7:14.49:0,14,131	0/0:19,0:19:45.13:0,45,613	1/1:9,28:38:13:635,13,0	1/1:4,21:25:63.03:583,63,0	1/1:1,10:11:19.36:264,19,0
chr10	87250857	.	TAC	T	3648.05	PASS	AB=0.865;AC=18;AF=0.321;AN=56;BaseQRankSum=4.020;DP=768;FS=5.387;HRun=0;HaplotypeScore=124.0215;InbreedingCoeff=0.5248;MQ=56.57;MQ0=28;MQRankSum=1.281;QD=10.08;ReadPosRankSum=0.188;VQSLOD=3.2882;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:48:38.55:0,39,342	0/0:6,0:10:16.61:0,17,128	0/1:58,0:30:8.79:9,0,151	0/0:50,0:24:24.11:0,24,324	0/0:16,0:16:39.06:0,39,560	0/0:17,0:17:28.65:0,29,428	0/0:22,1:24:6.93:0,7,508	1/1:18,23:42:21.71:638,22,0	0/0:32,3:35:11.56:0,12,1077	0/0:14,0:22:44.91:0,45,402	0/0:10,0:17:11.73:0,12,87	0/1:21,2:23:19.12:19,0,655	0/0:24,0:24:33.98:0,34,817	0/0:20,0:20:51.17:0,51,798	0/1:32,5:37:27.30:27,0,954	0/0:42,2:44:67.17:0,67,1496	0/0:16,0:20:17.07:0,17,126	0/0:6,0:23:30.49:0,30,354	1/1:6,14:19:36.07:406,36,0	1/1:5,11:16:21.06:246,21,0	1/1:23,48:66:99:1152,102,0	0/1:10,2:12:34.21:34,0,412	0/0:8,0:10:11.23:0,11,62	0/0:19,3:22:6.90:0,7,542	0/1:13,1:14:2.69:3,0,393	1/1:11,22:30:10.46:455,10,0	1/1:6,17:21:41.86:468,42,0	0/1:3,6:8:2.91:190,0,3
chr10	87250902	.	AAT	A	327.08	PASS	AB=0.933;AC=7;AF=0.125;AN=56;BaseQRankSum=7.401;DP=742;FS=3.183;HRun=0;HaplotypeScore=135.2367;InbreedingCoeff=0.1855;MQ=65.26;MQ0=7;MQRankSum=-6.408;QD=3.89;ReadPosRankSum=-4.987;VQSLOD=1.0373;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:90.22:0,90,1568	0/1:5,3:8:90.59:91,0,149	0/0:38,0:27:60.12:0,60,1141	0/0:46,0:35:60.07:0,60,1459	0/0:20,0:20:60.21:0,60,1158	0/0:19,0:19:54.17:0,54,996	0/0:27,0:27:78.23:0,78,1419	0/0:31,0:30:90.28:0,90,1586	0/0:39,0:39:81.78:0,82,2091	0/1:23,0:23:88.29:88,0,481	0/1:14,0:14:13.91:55,0,14	0/0:30,0:29:87.30:0,87,1700	0/0:27,0:27:81.28:0,81,1536	0/0:27,0:27:78.10:0,78,1462	0/0:36,0:36:99:0,102,1852	0/0:39,0:39:99:0,117,2166	0/1:14,1:15:65.27:65,0,219	0/1:16,0:16:46.16:46,0,456	0/0:26,0:25:64.71:0,65,1307	0/0:13,0:13:36.11:0,36,658	0/0:61,0:59:99:0,122,3096	0/0:15,0:15:45.14:0,45,834	1/1:8,0:8:14.95:117,15,0	0/0:23,0:23:66.22:0,66,1251	0/0:18,0:18:23.75:0,24,931	0/0:28,1:26:50.67:0,51,1180	0/0:35,0:34:99:0,102,1909	0/0:17,0:17:51.17:0,51,959
chr10	87250904	.	T	TGAGAGAGA	4514.86	PASS	AB=0.968;AC=13;AF=0.232;AN=56;BaseQRankSum=0.828;DP=741;FS=5.104;HRun=0;HaplotypeScore=204.3564;InbreedingCoeff=0.8765;MQ=65.99;MQ0=7;MQRankSum=-9.083;QD=37.62;ReadPosRankSum=-3.660;VQSLOD=3.8326;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:81.24:0,81,1831	1/1:8,0:8:11.23:283,11,0	0/0:39,0:28:60.77:0,61,1186	0/0:47,0:35:42.29:0,42,1463	0/0:20,0:20:57.19:0,57,1391	0/0:18,0:18:51.14:0,51,1226	0/0:26,0:26:69.24:0,69,1697	0/0:29,0:28:51.16:0,51,1174	0/0:39,0:39:99:0,108,2630	1/1:6,19:26:60.19:1905,60,0	1/1:7,7:14:9.03:212,9,0	0/0:30,0:29:75.26:0,75,1972	0/0:27,0:27:69.24:0,69,1749	0/0:25,0:25:63.22:0,63,1585	0/0:34,0:34:79.13:0,79,1856	0/0:39,0:39:93.28:0,93,2225	1/1:3,11:17:31.35:960,31,0	1/1:12,3:16:24.08:748,24,0	0/0:26,0:25:54.18:0,54,1247	0/0:13,0:13:27.02:0,27,638	0/0:62,0:60:99:0,151,3723	0/0:15,0:15:39.12:0,39,772	1/1:0,9:9:15.05:343,15,0	0/0:23,0:23:60.18:0,60,1351	0/0:18,0:18:48.16:0,48,1146	0/1:29,1:27:65.15:65,0,1334	0/0:34,0:33:90.25:0,90,2176	0/0:18,0:18:45.14:0,45,1039
chr10	87251680	.	C	CTTT	2409.54	PASS	AB=0.947;AC=15;AF=0.268;AN=56;BaseQRankSum=-2.988;DP=601;FS=0.467;HRun=13;HaplotypeScore=118.4469;InbreedingCoeff=0.8293;MQ=70.43;MQ0=2;MQRankSum=-2.837;QD=15.35;ReadPosRankSum=-1.767;VQSLOD=1.9396;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,15:29:36.05:516,36,0	1/1:2,3:6:13.55:173,14,0	0/0:39,0:23:26.44:0,26,219	0/0:32,0:13:6.39:0,6,105	0/0:19,0:23:45.79:0,46,437	0/1:13,0:18:5.33:5,0,225	0/0:13,0:17:6.02:0,6,218	0/0:26,0:26:20.58:0,21,338	0/0:21,0:23:3.89:0,4,384	1/1:5,17:24:53.84:637,54,0	1/1:3,14:20:29.91:380,30,0	0/0:18,0:19:33.11:0,33,313	0/0:17,0:18:25.85:0,26,210	0/0:13,0:13:29.97:0,30,312	0/0:21,0:22:2.88:0,3,125	0/0:15,0:17:29.71:0,30,290	1/1:9,13:28:29.96:315,30,0	1/1:11,4:15:26.84:319,27,0	0/0:19,0:19:38.73:0,39,366	0/0:17,0:17:26.68:0,27,271	0/0:34,0:35:77.09:0,77,757	0/0:14,0:17:27.63:0,28,250	1/1:6,8:17:18.01:257,18,0	0/0:19,0:21:36.73:0,37,379	0/0:17,0:18:41.76:0,42,399	0/0:23,0:23:53.99:0,54,551	0/0:33,0:33:68.99:0,69,707	0/0:9,0:9:11.57:0,12,129
chr10	87254019	.	AGCGCGCGCGCGCGC	A	2134.65	PASS	AB=0.891;AC=15;AF=0.268;AN=56;BaseQRankSum=6.053;DP=353;FS=6.655;HRun=0;HaplotypeScore=129.9652;InbreedingCoeff=0.3990;MQ=76.45;MQ0=9;MQRankSum=-1.939;QD=12.41;ReadPosRankSum=0.334;VQSLOD=2.1481;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:39.11:0,39,1637	1/1:2,2:4:6.02:235,6,0	0/1:24,0:10:1.98:5,0,2	0/1:34,0:16:3.25:3,0,231	0/0:8,0:8:15.03:0,15,594	0/0:13,0:13:24.08:0,24,1322	0/0:12,0:12:27.08:0,27,1318	0/1:20,0:21:27.09:27,0,81	0/0:6,0:6:15.05:0,15,729	1/1:12,12:23:30.56:890,31,0	1/1:3,5:8:3.48:71,3,0	0/0:7,0:7:3.01:0,3,204	0/0:3,0:3:3.01:0,3,31	0/1:4,0:5:88.85:89,0,162	0/0:5,0:5:12.02:0,12,581	0/0:10,0:10:12.04:0,12,645	1/1:7,10:18:9.03:362,9,0	1/1:4,9:14:12.04:483,12,0	0/0:4,0:7:10.55:0,11,86	0/0:9,0:16:11.85:0,12,148	0/0:9,0:16:0.47:0,0,1	0/0:7,0:11:17.26:0,17,516	0/0:5,0:5:6.02:0,6,378	0/0:9,0:9:9.03:0,9,609	0/0:17,0:17:30.10:0,30,1260	0/1:10,1:20:99:130,0,339	0/0:5,0:15:2.89:0,3,207	0/0:4,0:4:5.17:0,5,20
chr10	87257517	.	GAC	G	1223.97	PASS	AB=0.926;AC=27;AF=0.500;AN=54;BaseQRankSum=8.784;DP=558;FS=0.520;HRun=0;HaplotypeScore=85.1383;InbreedingCoeff=-0.1100;MQ=65.71;MQ0=9;MQRankSum=-1.285;QD=2.85;ReadPosRankSum=-1.980;VQSLOD=1.0611;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,23:39:74.70:785,75,0	1/1:5,0:5:2.80:13,3,0	0/0:27,0:9:0.68:0,1,42	0/0:32,0:12:9.50:0,10,133	0/0:12,0:13:24.08:0,24,357	1/1:13,0:13:5.60:26,6,0	0/1:25,0:25:25.15:44,0,25	0/1:13,4:17:74.46:107,0,74	0/1:16,3:19:59.23:59,0,452	0/1:10,0:10:12.66:14,0,13	./.	0/1:26,2:27:16.42:16,0,607	0/1:14,1:15:0.68:1,0,381	0/1:20,2:22:56.19:56,0,498	0/1:17,2:19:3.70:4,0,361	0/0:27,1:28:15.23:0,15,778	1/1:24,0:24:8.39:38,8,0	1/1:18,0:18:5.54:24,6,0	0/0:13,0:13:9.03:0,9,137	0/1:14,1:15:6.70:7,0,336	0/1:24,3:27:22.56:23,0,519	0/1:16,0:16:4.66:5,0,19	1/1:10,0:10:2.80:13,3,0	0/1:36,7:43:99:117,0,938	0/1:23,2:25:25.44:25,0,491	0/1:18,1:19:3.22:3,0,377	0/1:19,1:20:0.68:1,0,421	0/0:10,0:10:18.06:0,18,275
chr10	87257543	.	CACACACACTGACAT	C	1552.96	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=6.742;DP=720;FS=2.539;HRun=0;HaplotypeScore=213.8966;InbreedingCoeff=0.8447;MQ=56.38;MQ0=26;MQRankSum=-3.473;QD=9.83;ReadPosRankSum=-0.284;VQSLOD=2.3192;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,129,5227	1/1:1,4:5:6.02:182,6,0	0/0:65,0:16:39.01:0,39,869	0/0:71,0:26:34.58:0,35,1258	0/0:14,0:14:30.10:0,30,1483	1/1:4,18:22:6.02:246,6,0	1/1:31,0:31:18.04:277,18,0	0/0:19,0:19:46.88:0,47,1321	0/0:21,0:21:60.20:0,60,2748	1/1:16,0:16:27.07:495,27,0	0/1:7,0:7:0:0,0,0	0/0:25,0:24:63.21:0,63,3211	0/0:18,0:18:48.16:0,48,2378	0/0:26,0:26:56.98:0,57,2966	0/0:24,0:24:51.16:0,51,2513	0/0:35,0:35:87.29:0,87,3954	1/1:29,0:29:8.77:196,9,0	1/1:24,0:24:5.95:92,6,0	0/0:21,0:18:38.96:0,39,1219	0/0:19,0:19:36.10:0,36,1775	0/0:36,0:36:78.18:0,78,3674	1/1:16,1:17:3:120,3,0	1/1:2,5:7:3.01:123,3,0	0/0:39,0:39:99:0,108,5574	0/0:30,0:30:72.23:0,72,3210	0/0:24,0:24:55.67:0,56,2609	0/0:18,0:16:48.16:0,48,2039	0/0:8,0:8:24.07:0,24,1074
chr10	87257545	.	CACACACTGACAT	C	1919.89	PASS	AB=0.538;AC=17;AF=0.304;AN=56;BaseQRankSum=6.168;DP=733;FS=4.620;HRun=0;HaplotypeScore=198.2954;InbreedingCoeff=0.8419;MQ=54.95;MQ0=25;MQRankSum=-3.636;QD=12.23;ReadPosRankSum=-0.135;VQSLOD=2.5939;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,129,4447	1/1:5,0:5:6.02:149,6,0	0/0:65,0:17:44.98:0,45,941	0/0:73,0:27:20.33:0,20,1171	0/0:15,0:15:33.11:0,33,1395	1/1:22,0:22:6.02:180,6,0	1/1:28,3:31:18.06:453,18,0	0/0:21,0:21:55.58:0,56,1462	0/0:22,0:22:63.21:0,63,2481	1/1:3,13:16:27.08:645,27,0	0/1:1,6:7:0:0,0,0	0/0:25,0:25:66.22:0,66,2877	0/0:18,0:18:48.16:0,48,2078	0/0:27,0:27:59.99:0,60,2655	0/0:25,0:25:54.17:0,54,2302	0/0:34,0:34:87.29:0,87,3510	1/1:1,28:29:8.58:329,9,0	1/1:23,1:24:5.65:163,6,0	0/0:21,0:18:38.92:0,39,1140	0/0:19,0:19:36.10:0,36,1542	0/0:37,0:37:81.23:0,81,3293	1/1:16,0:16:2.81:87,3,0	1/1:7,0:7:3:90,3,0	0/0:41,0:41:99:0,114,4992	0/0:31,0:31:75.24:0,75,2900	0/0:24,0:24:55.39:0,55,2314	0/0:18,0:16:48.16:0,48,1780	0/0:11,0:11:33.10:0,33,1163
chr10	87257547	.	CACACTGACAT	C	1737.63	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=6.346;DP=728;FS=4.582;HRun=0;HaplotypeScore=176.7922;InbreedingCoeff=0.8414;MQ=55.87;MQ0=25;MQRankSum=-3.452;QD=11.36;ReadPosRankSum=0.104;VQSLOD=2.4569;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,129,3728	1/1:5,0:5:6.02:135,6,0	0/0:68,0:20:53.79:0,54,1086	0/0:73,0:27:20.81:0,21,1074	0/0:13,0:13:33.11:0,33,1249	1/1:21,0:21:6.02:152,6,0	1/1:10,22:32:18.06:501,18,0	0/0:22,0:22:57.96:0,58,1501	0/0:21,0:21:63.21:0,63,2174	1/1:15,0:15:27.08:570,27,0	0/1:7,0:7:0:0,0,0	0/0:24,0:24:66.22:0,66,2484	0/0:18,0:18:48.03:0,48,1824	0/0:27,0:27:60.04:0,60,2284	0/0:25,0:25:54.17:0,54,2042	0/0:34,0:34:87.29:0,87,3104	1/1:29,0:29:8.30:231,8,0	1/1:1,21:22:5.82:175,6,0	0/0:21,0:18:41.87:0,42,1148	0/0:18,0:18:36.10:0,36,1338	0/0:37,0:37:84.25:0,84,2951	1/1:2,13:15:2.81:73,3,0	1/1:7,0:7:2.89:76,3,0	0/0:42,0:42:99:0,117,4347	0/0:31,0:31:78.19:0,78,2607	0/0:23,0:23:55.40:0,55,2028	0/0:18,0:16:48.16:0,48,1591	0/0:11,0:11:33.10:0,33,1027
chr10	87258568	.	CTA	C	69.73	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.078;DP=1139;FS=11.595;HRun=0;HaplotypeScore=160.3372;InbreedingCoeff=0.9915;MQ=70.55;MQ0=0;MQRankSum=-2.473;QD=3.67;ReadPosRankSum=-3.742;VQSLOD=1.3388;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:16:17.86:160,18,0	0/0:13,0:13:39.09:0,39,624	0/0:40,0:35:99:0,102,1568	0/0:42,0:41:99:0,108,1604	0/0:30,0:30:81.24:0,81,1406	0/0:41,0:41:99:0,108,1859	0/0:36,0:36:90.23:0,90,1472	0/0:65,0:65:99:0,172,2935	0/0:52,0:52:99:0,147,2626	0/0:57,0:57:99:0,166,2927	0/0:22,0:22:66.17:0,66,1097	0/0:52,0:52:99:0,150,2592	0/0:46,0:46:99:0,129,2307	0/0:43,0:43:99:0,126,2217	0/0:64,0:64:99:0,181,3117	0/0:51,0:51:99:0,147,2439	0/0:32,1:32:67.31:0,67,1526	0/0:35,0:34:84.36:0,84,1649	0/0:16,0:16:45.15:0,45,809	0/0:33,0:33:90.29:0,90,1603	0/0:95,1:94:99:0,241,4043	0/0:37,0:37:99:0,105,1886	0/0:45,0:45:99:0,126,2248	0/0:42,0:42:99:0,120,2056	0/0:29,0:29:75.26:0,75,1359	0/0:55,0:53:99:0,151,2736	0/0:20,0:19:51.16:0,51,903	0/0:25,0:25:75.16:0,75,1273
chr10	87258734	.	TTGTGTGTGTG	T	1271.90	PASS	AB=0.833;AC=9;AF=0.161;AN=56;BaseQRankSum=3.901;DP=967;FS=1.794;HRun=0;HaplotypeScore=268.3389;InbreedingCoeff=0.7343;MQ=47.69;MQ0=49;MQRankSum=-4.016;QD=9.09;ReadPosRankSum=-2.027;VQSLOD=1.9172;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,9:34:61.53:238,0,62	0/0:3,0:6:12.04:0,12,462	0/0:35,0:1:2.97:0,3,20	0/0:30,0:3:3.98:0,4,161	0/0:41,0:41:75.21:0,75,2610	1/1:4,11:15:17.77:383,18,0	1/1:10,14:21:6.02:169,6,0	0/0:43,0:39:71.80:0,72,966	0/0:35,0:33:75.26:0,75,3108	0/0:33,0:31:66.21:0,66,2047	0/0:5,0:10:15.05:0,15,535	0/0:40,0:39:81.26:0,81,3390	0/0:39,0:40:93.35:0,93,3726	0/0:43,0:40:84.29:0,84,3419	0/0:54,0:51:99:0,102,4191	0/0:55,0:54:99:0,124,4963	0/0:13,0:32:41.90:0,42,1361	0/0:14,0:16:38.71:0,39,1249	0/0:16,0:9:20.99:0,21,301	0/0:28,0:26:48.14:0,48,1412	0/0:84,0:61:87.30:0,87,3931	1/1:5,23:28:12.04:312,12,0	1/1:4,24:28:11.92:321,12,0	0/0:41,0:44:99:0,109,4109	0/0:25,0:25:42.12:0,42,1673	0/0:37,0:41:69.14:0,69,1902	0/0:24,0:25:39.13:0,39,1690	0/0:14,0:9:15.05:0,15,622
chr10	87258882	.	TTGTGTGTGTG	T	35.89	PASS	AB=0.609;AC=3;AF=0.063;AN=48;BaseQRankSum=1.960;DP=818;FS=5.792;HRun=0;HaplotypeScore=199.2315;InbreedingCoeff=0.3176;MQ=45.43;MQ0=50;MQRankSum=-2.478;QD=0.56;ReadPosRankSum=-1.209;VQSLOD=2.2932;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,32:50:41.08:61,0,41	./.	0/0:35,0:1:2.98:0,3,22	0/0:38,0:4:3.01:0,3,32	0/0:30,0:31:48:0,48,1222	1/1:3,0:6:3.01:64,3,0	./.	0/0:48,0:34:20.90:0,21,190	0/0:36,0:35:51.03:0,51,1430	0/0:12,0:10:17.97:0,18,244	./.	0/0:43,0:47:84.21:0,84,2724	0/0:28,0:29:54.06:0,54,1770	0/0:32,0:34:63.20:0,63,2454	0/0:37,0:39:75.18:0,75,2255	0/0:38,0:38:87.14:0,87,2831	0/0:2,0:2:0:0,0,0	0/0:5,0:2:3.01:0,3,59	0/0:12,0:7:6.01:0,6,87	0/0:44,0:37:69.16:0,69,2037	0/0:91,0:73:78.96:0,79,2400	./.	0/0:11,0:4:5.96:0,6,43	0/0:45,0:39:78.14:0,78,2487	0/0:23,0:23:36.08:0,36,1201	0/0:45,0:44:66.09:0,66,1475	0/0:20,0:18:18.03:0,18,486	0/0:15,0:14:17.72:0,18,680
chr10	87260401	.	AGGG	A	1412.71	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.652;DP=637;FS=0.000;HRun=3;HaplotypeScore=129.5341;InbreedingCoeff=0.9632;MQ=74.24;MQ0=0;MQRankSum=-8.565;QD=22.79;ReadPosRankSum=-1.413;VQSLOD=0.1580;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,2503	0/0:13,0:13:36.12:0,36,874	0/0:19,0:18:54.13:0,54,1023	0/0:21,0:20:45.62:0,46,858	0/0:23,0:23:69.18:0,69,1404	1/1:3,15:18:32.25:506,32,0	1/1:8,14:22:14.39:542,14,0	0/0:32,0:32:93.28:0,93,1926	0/0:29,0:29:87.25:0,87,1924	0/0:24,0:24:72.21:0,72,1643	0/0:11,0:11:30.10:0,30,726	0/0:34,0:34:99:0,102,2407	0/0:20,0:20:60.15:0,60,1257	0/0:28,0:28:84.24:0,84,1907	0/0:19,0:19:57.18:0,57,1299	0/0:26,0:26:78.23:0,78,1762	0/0:43,0:43:99:0,126,2890	0/0:32,0:32:90.24:0,90,2071	0/0:17,0:17:50.16:0,50,986	0/0:5,0:5:15.04:0,15,316	0/0:45,0:45:99:0,135,2968	1/1:7,7:14:18.36:333,18,0	1/1:3,5:8:7.19:184,7,0	0/0:32,0:32:96.33:0,96,2364	0/0:9,0:9:27.02:0,27,609	0/0:31,0:31:90.29:0,90,2111	0/0:15,0:15:45.15:0,45,1101	0/0:8,0:8:24.08:0,24,591
chr10	87260407	.	GA	G	571.61	PASS	AB=0.576;AC=7;AF=0.125;AN=56;BaseQRankSum=10.682;DP=623;FS=1.204;HRun=2;HaplotypeScore=100.8709;InbreedingCoeff=0.8159;MQ=72.53;MQ0=0;MQRankSum=-10.055;QD=10.39;ReadPosRankSum=0.388;VQSLOD=1.6075;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,1505	0/0:13,0:13:33.11:0,33,494	0/0:17,0:16:48.12:0,48,659	0/0:20,0:19:29.33:0,29,661	0/0:26,0:26:72.22:0,72,1031	1/1:2,15:17:21.76:235,22,0	0/1:5,14:19:9.29:247,0,9	0/0:31,0:31:87.29:0,87,1280	0/0:27,0:27:78.26:0,78,1150	0/0:27,0:27:75.24:0,75,1087	0/0:12,0:12:30.09:0,30,430	0/0:34,0:34:99:0,102,1526	0/0:18,0:18:54.17:0,54,790	0/0:25,0:25:75.24:0,75,1100	0/0:18,0:18:54.17:0,54,788	0/0:24,0:24:72.22:0,72,1039	0/0:41,0:41:99:0,120,1794	0/0:35,0:35:99:0,99,1409	0/0:14,0:14:36.12:0,36,522	0/0:4,0:4:12.04:0,12,178	0/0:45,0:45:99:0,135,1976	1/1:4,7:11:8.77:139,9,0	1/1:3,5:8:13.44:91,13,0	0/0:35,0:35:99:0,105,1550	0/0:10,0:10:30.10:0,30,447	0/0:31,0:31:90.29:0,90,1308	0/0:16,0:16:48.15:0,48,699	0/0:8,0:8:24.08:0,24,359
chr10	87261374	.	C	CT	3663.18	PASS	AB=0.636;AC=17;AF=0.304;AN=56;BaseQRankSum=-7.195;DP=587;FS=7.767;HRun=10;HaplotypeScore=67.4257;InbreedingCoeff=0.8409;MQ=76.66;MQ0=1;MQRankSum=-0.082;QD=20.81;ReadPosRankSum=-0.362;VQSLOD=4.3261;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:36:94.87:0,95,762	1/1:1,10:11:27.03:276,27,0	0/0:27,0:22:7.86:0,8,205	0/0:19,0:16:12.35:0,12,137	0/0:15,2:17:9.91:0,10,282	0/1:6,8:14:40.85:223,0,41	1/1:6,27:34:52.67:801,53,0	0/0:21,0:21:41.91:0,42,341	0/0:20,0:20:53.91:0,54,439	1/1:4,17:21:48.09:501,48,0	1/1:2,10:12:5.39:251,5,0	0/0:29,0:29:62.81:0,63,507	0/0:16,0:16:41.91:0,42,341	0/0:18,0:19:49.96:0,50,400	0/0:27,1:28:33.82:0,34,474	0/0:17,0:17:47.94:0,48,394	1/1:5,15:20:38.93:398,39,0	1/1:6,20:27:20.63:462,21,0	0/0:18,1:19:4.16:0,4,239	0/0:14,0:14:29.93:0,30,246	0/0:19,1:21:21.07:0,21,365	1/1:3,9:12:21.94:226,22,0	1/1:5,20:25:10.86:526,11,0	0/0:23,0:25:66.99:0,67,526	0/0:24,0:25:64.95:0,65,523	0/0:21,0:21:47.92:0,48,392	0/0:27,0:27:62.87:0,63,513	0/0:9,0:9:20.96:0,21,172
chr10	87261789	.	CA	C	3494.61	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.509;DP=697;FS=8.438;HRun=3;HaplotypeScore=70.5841;InbreedingCoeff=0.9985;MQ=84.76;MQ0=0;MQRankSum=-2.590;QD=32.97;ReadPosRankSum=0.510;VQSLOD=3.8034;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,147,2075	1/1:1,8:9:21.07:260,21,0	0/0:19,0:19:47.63:0,48,662	0/0:26,0:26:60.39:0,60,948	0/0:26,0:26:72.70:0,73,1019	0/0:18,0:18:54.18:0,54,777	0/0:22,0:22:66.22:0,66,950	0/0:23,0:23:66.22:0,66,950	0/0:12,0:12:36.12:0,36,518	1/1:3,22:25:66.21:818,66,0	1/1:2,15:17:45.14:558,45,0	0/0:30,0:30:90.29:0,90,1279	0/0:22,0:22:63.21:0,63,891	0/0:36,0:36:99:0,108,1539	0/0:35,0:35:99:0,105,1511	0/0:31,0:31:93.31:0,93,1340	1/1:2,25:27:69.22:855,69,0	1/1:0,28:28:81.25:1003,81,0	0/0:27,0:27:75.24:0,75,1063	0/0:18,0:18:54.18:0,54,777	0/0:37,0:37:99:0,108,1496	0/0:23,0:23:63.21:0,63,896	0/0:26,0:26:69.23:0,69,994	0/0:25,0:25:75.21:0,75,1056	0/0:26,0:26:72.03:0,72,1027	0/0:26,0:26:75.25:0,75,1080	0/0:26,0:26:78.25:0,78,1106	0/0:8,0:8:24.08:0,24,346
chr10	87262141	.	A	ACAG	27363.41	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-15.013;DP=720;FS=5.239;HRun=0;HaplotypeScore=95.5962;InbreedingCoeff=0.9995;MQ=76.63;MQ0=0;MQRankSum=-6.521;QD=61.63;ReadPosRankSum=0.358;VQSLOD=6.5918;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,39:44:99:2838,117,0	1/1:0,11:11:24.08:591,24,0	0/0:22,0:22:59.91:0,60,939	0/0:15,0:15:39.60:0,40,671	0/0:26,0:26:78.25:0,78,1413	1/1:0,21:23:54.19:1296,54,0	1/1:1,21:25:57.20:1391,57,0	1/1:5,26:31:90.31:2170,90,0	0/0:38,0:38:99:0,111,2000	1/1:0,30:32:96.33:2308,96,0	1/1:2,17:19:39.13:943,39,0	0/0:29,0:29:84.29:0,84,1566	0/0:17,0:17:51.17:0,51,942	0/0:20,0:20:57.18:0,57,1021	0/0:34,0:34:99:0,102,1884	0/0:28,0:28:81.27:0,81,1482	1/1:1,31:33:84.29:2061,84,0	1/1:1,26:29:75.26:1847,75,0	1/1:6,25:36:99:2311,101,0	1/1:1,19:20:57.20:1362,57,0	1/1:3,28:33:75.26:1809,75,0	1/1:1,17:22:51.18:1241,51,0	1/1:2,13:19:44.93:1074,45,0	0/0:29,0:29:87.30:0,87,1614	0/0:18,0:18:54.17:0,54,961	1/1:2,27:30:90.28:2148,90,0	1/1:0,20:25:54.19:1307,54,0	1/1:0,12:12:27.09:665,27,0
chr10	87262612	.	G	GA	1075.27	PASS	AB=0.897;AC=10;AF=0.179;AN=56;BaseQRankSum=1.446;DP=498;FS=2.051;HRun=9;HaplotypeScore=80.3911;InbreedingCoeff=0.7464;MQ=73.88;MQ0=1;MQRankSum=-3.853;QD=13.79;ReadPosRankSum=-1.798;VQSLOD=3.5096;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:62.02:0,62,526	0/0:4,0:4:12:0,12,104	0/1:24,1:15:1.38:1,0,187	0/0:26,0:18:12.08:0,12,77	0/0:27,0:27:77.97:0,78,674	1/1:4,11:15:36.09:391,36,0	1/1:3,11:12:24.06:264,24,0	0/0:31,0:31:74.94:0,75,643	0/0:13,0:13:32.99:0,33,286	0/0:24,0:24:62.98:0,63,547	0/0:13,0:13:35.08:0,35,310	0/0:12,0:12:23.95:0,24,201	0/1:4,1:5:21.18:21,0,66	0/0:18,0:17:14.54:0,15,288	0/0:19,0:19:47.95:0,48,413	0/0:15,0:15:44.95:0,45,381	0/0:20,1:21:29.84:0,30,487	0/0:19,0:19:35.97:0,36,312	0/0:15,0:15:41.99:0,42,364	0/0:24,0:24:68.98:0,69,599	0/0:4,0:4:5.99:0,6,52	1/1:0,3:3:9.02:100,9,0	1/1:3,13:16:42.11:459,42,0	0/0:9,0:9:20.98:0,21,182	0/0:30,0:30:83.94:0,84,721	0/0:23,0:23:65.98:0,66,573	0/0:27,0:26:65.97:0,66,570	0/0:16,0:16:44.98:0,45,391
chr10	87262633	.	CTT	C	4386.85	PASS	AB=0.573;AC=20;AF=0.357;AN=56;BaseQRankSum=0.168;DP=490;FS=0.801;HRun=11;HaplotypeScore=80.8557;InbreedingCoeff=0.6807;MQ=71.96;MQ0=3;MQRankSum=-0.429;QD=18.91;ReadPosRankSum=-0.237;VQSLOD=3.9407;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:25:54.12:568,54,0	0/0:1,0:4:4.99:0,5,17	0/0:29,0:17:13.19:0,13,129	0/0:25,0:16:17.89:0,18,255	0/0:32,0:32:90.29:0,90,1360	0/1:3,1:13:4.63:5,0,55	0/1:3,1:7:15.97:16,0,38	1/1:6,20:26:60.12:638,60,0	0/0:12,0:12:24.08:0,24,369	0/0:5,1:22:13.64:0,14,160	0/0:1,0:12:21.98:0,22,76	0/0:11,0:11:25.64:0,26,373	0/0:6,0:7:17.55:0,18,238	0/0:14,0:14:38.62:0,39,563	0/0:17,0:17:51.17:0,51,771	0/0:16,0:16:45.14:0,45,664	0/0:3,0:19:42.42:0,42,145	0/1:3,1:18:1.48:1,0,64	1/1:1,18:19:54.11:562,54,0	1/1:1,25:27:65.85:681,66,0	1/1:1,1:2:5.81:45,6,0	0/0:0,0:1:2.50:0,2,9	0/1:4,1:14:6.45:6,0,51	0/0:3,0:4:11.53:0,12,147	0/0:29,0:29:80.73:0,81,1167	1/1:5,24:29:58.89:692,59,0	1/1:4,27:30:72.15:757,72,0	1/1:3,13:16:39.09:415,39,0
chr10	87263887	.	TA	T	7789.21	PASS	AB=0.941;AC=35;AF=0.625;AN=56;BaseQRankSum=10.643;DP=521;FS=1.134;HRun=9;HaplotypeScore=51.7663;InbreedingCoeff=0.9221;MQ=75.77;MQ0=0;MQRankSum=-1.827;QD=22.71;ReadPosRankSum=0.238;VQSLOD=5.4358;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,41:43:99:1043,114,0	1/1:0,9:9:27.01:247,27,0	0/1:15,1:16:18.03:18,0,246	0/0:7,0:8:17.99:0,18,177	0/0:23,1:24:44.70:0,45,746	1/1:1,25:26:66.04:604,66,0	1/1:4,20:24:57.02:522,57,0	1/1:2,23:25:68.96:616,69,0	0/0:18,0:18:51.15:0,51,588	1/1:1,19:20:57.03:522,57,0	1/1:1,7:8:21.01:192,21,0	0/0:23,0:23:66.20:0,66,762	0/0:28,1:29:41.70:0,42,711	0/0:18,0:18:51.14:0,51,580	0/0:16,0:16:36.10:0,36,407	0/0:13,0:13:39.12:0,39,450	1/1:2,21:23:57.02:522,57,0	1/1:3,22:25:63.02:576,63,0	1/1:3,13:16:38.96:341,39,0	1/1:2,7:9:21.01:192,21,0	1/1:1,16:17:45.02:412,45,0	1/1:1,13:14:32.84:281,33,0	1/1:1,12:13:36.02:329,36,0	0/0:19,0:19:54.13:0,54,603	0/0:10,0:10:30.09:0,30,346	1/1:1,18:19:54.03:494,54,0	1/1:2,24:26:69.03:631,69,0	1/1:1,9:10:27.01:247,27,0
chr10	87264793	.	T	TG	6300.41	PASS	AB=0.533;AC=21;AF=0.375;AN=56;BaseQRankSum=-14.216;DP=657;FS=4.385;HRun=7;HaplotypeScore=64.3577;InbreedingCoeff=0.9286;MQ=77.53;MQ0=0;MQRankSum=0.070;QD=26.92;ReadPosRankSum=-0.617;VQSLOD=5.3592;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,99,949	0/0:12,0:12:36.06:0,36,348	0/0:18,0:18:38.95:0,39,363	0/0:16,0:16:21.47:0,21,199	0/0:15,0:15:19.26:0,19,354	1/1:2,18:20:45.14:543,45,0	1/1:2,23:25:66.20:797,66,0	1/1:9,19:28:48.13:566,48,0	0/0:25,0:25:75.10:0,75,718	0/0:27,0:27:75.11:0,75,720	0/0:16,0:16:42.06:0,42,405	0/0:30,0:29:75.11:0,75,724	0/0:19,0:19:57.09:0,57,550	0/0:25,0:25:72.12:0,72,695	0/0:25,0:25:72.12:0,72,695	0/0:24,0:24:69.10:0,69,661	0/0:53,0:53:99:0,141,1355	0/0:28,0:28:75.12:0,75,724	1/1:6,12:18:36.11:434,36,0	1/1:2,9:11:27.04:310,27,0	1/1:7,36:43:90.26:1075,90,0	1/1:2,13:15:39.12:471,39,0	1/1:4,22:27:60.05:703,60,0	0/0:30,2:32:20.68:0,21,767	0/0:19,0:19:42.05:0,42,405	0/1:2,14:16:9.77:459,0,10	1/1:2,21:22:54.17:652,54,0	1/1:0,8:8:24.07:290,24,0
chr10	87266923	.	AGC	A	1378.23	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=4.859;DP=410;FS=7.952;HRun=0;HaplotypeScore=78.9737;InbreedingCoeff=0.9099;MQ=79.54;MQ0=6;MQRankSum=-7.325;QD=17.67;ReadPosRankSum=-1.374;VQSLOD=2.5346;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:57.20:0,57,1064	0/0:8,0:8:15.05:0,15,265	0/0:27,0:20:43.69:0,44,856	0/0:37,0:27:65.87:0,66,1094	0/0:8,0:8:18.06:0,18,336	0/0:14,0:14:36.12:0,36,672	0/0:18,0:18:48.16:0,48,889	1/1:3,12:15:36.12:530,36,0	0/0:16,0:16:39.12:0,39,682	0/0:17,0:17:48.16:0,48,898	0/0:9,0:9:27.08:0,27,454	0/0:14,0:14:36.12:0,36,670	0/0:16,0:16:45.15:0,45,831	0/0:8,0:8:24.08:0,24,447	0/0:16,0:16:48.15:0,48,857	0/0:15,0:15:39.13:0,39,727	0/0:14,0:13:36.12:0,36,640	0/0:14,0:14:36.12:0,36,639	1/1:2,8:10:18.06:259,18,0	1/1:0,7:7:3.01:44,3,0	1/1:9,11:20:3.01:44,3,0	0/0:12,0:12:33.11:0,33,611	0/0:10,0:10:30.06:0,30,520	0/0:24,0:24:56.99:0,57,1047	0/0:12,0:12:36.12:0,36,661	1/1:0,9:9:27.09:378,27,0	1/1:3,6:8:9.03:132,9,0	1/1:1,7:7:12.04:171,12,0
chr10	87266977	.	TCACACACACACACACACACACACACACACA	T	818.48	PASS	AC=8;AF=0.190;AN=42;BaseQRankSum=3.517;DP=378;FS=4.041;HRun=0;HaplotypeScore=123.2520;InbreedingCoeff=0.4115;MQ=26.81;MQ0=122;MQRankSum=-2.630;QD=17.05;ReadPosRankSum=0.703;VQSLOD=1.7575;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,1:1:3.01:228,3,0	./.	./.	0/0:9,0:8:6.02:0,6,723	0/0:19,0:11:6.91:0,7,386	0/0:20,0:13:2.23:0,2,5	0/0:17,0:12:2.94:0,3,19	0/0:20,0:7:5.04:0,5,379	1/1:11,2:8:5.99:456,6,0	./.	0/0:17,0:11:4.51:0,5,23	0/0:12,0:9:9.03:0,9,559	0/0:17,0:9:5.32:0,5,651	0/0:14,0:8:6.02:0,6,689	0/0:18,0:11:9.97:0,10,1069	./.	1/1:20,0:8:5.61:239,6,0	0/0:8,0:6:3.01:0,3,147	./.	0/0:16,0:8:0.47:0,0,1	1/1:8,0:9:0.47:1,0,0	0/0:3,0:2:3.01:0,3,200	0/0:36,0:23:9.66:0,10,1110	0/0:12,0:9:6.91:0,7,703	0/0:10,0:7:10.28:0,10,351	0/0:13,0:12:6.49:0,6,130	./.
chr10	87268140	.	CGTGCGT	C	842.27	PASS	AB=0.986;AC=11;AF=0.220;AN=50;BaseQRankSum=2.805;DP=310;FS=0.000;HRun=0;HaplotypeScore=66.7707;InbreedingCoeff=0.2530;MQ=43.73;MQ0=54;MQRankSum=0.546;QD=7.26;ReadPosRankSum=2.047;VQSLOD=1.4504;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:26.50:0,26,178	1/1:3,0:2:6:73,6,0	./.	0/0:2,0:1:3:0,3,25	0/0:4,0:4:9.02:0,9,172	0/0:16,0:9:2.73:0,3,44	0/0:31,0:21:13.01:0,13,130	0/0:11,0:6:17.82:0,18,200	0/0:7,0:6:9:0,9,166	1/1:4,0:2:6:54,6,0	0/0:2,6:6:0:0,0,0	0/0:10,0:9:15.03:0,15,254	0/0:6,0:6:15.91:0,16,292	0/0:8,0:8:12.04:0,12,222	./.	0/0:5,0:3:6.02:0,6,146	1/1:32,0:27:48.09:513,48,0	0/1:15,0:14:35.07:211,0,35	0/0:12,0:8:21.07:0,21,404	0/0:9,0:8:12.04:0,12,236	0/1:31,0:21:23.14:23,0,757	0/1:11,0:9:32.86:41,0,33	./.	0/0:29,0:23:24.55:0,25,571	0/0:5,0:5:9.03:0,9,216	0/1:12,0:8:18.10:18,0,315	0/1:7,0:7:54.80:55,0,101	0/0:7,0:5:14.64:0,15,223
chr10	87270887	.	A	AGGG	2242.42	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.910;DP=709;FS=2.662;HRun=8;HaplotypeScore=113.0979;InbreedingCoeff=0.9878;MQ=84.12;MQ0=0;MQRankSum=-5.345;QD=17.25;ReadPosRankSum=-1.580;VQSLOD=0.7242;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:33:28.66:62,29,0	1/1:2,4:6:12.04:221,12,0	0/0:27,0:27:53.28:0,53,654	0/0:19,0:19:32.09:0,32,430	0/0:17,0:17:48.12:0,48,615	0/0:19,0:19:54.16:0,54,710	0/0:33,0:33:66.60:0,67,1102	0/0:28,0:28:63.16:0,63,814	0/0:24,0:24:69.20:0,69,891	1/1:14,6:23:18.02:272,18,0	1/1:8,2:11:15.03:232,15,0	0/0:43,0:43:99:0,120,1577	0/0:31,0:31:66.15:0,66,867	0/0:21,0:21:57.17:0,57,748	0/0:37,0:37:99:0,99,1300	0/0:26,0:26:72.21:0,72,932	1/1:11,21:35:54.12:973,54,0	1/1:4,15:22:36.10:667,36,0	0/0:27,0:27:66.16:0,66,844	0/0:19,0:19:54.17:0,54,707	0/0:58,0:58:99:0,150,1969	0/0:22,0:22:57.15:0,57,739	0/0:13,0:14:26.98:0,27,333	0/0:37,0:37:96.19:0,96,1221	0/0:24,0:24:60.13:0,60,772	0/0:25,0:25:24.11:0,24,749	0/0:17,0:17:36.08:0,36,458	0/0:11,0:11:30.09:0,30,394
chr10	87272079	.	TTATC	T	2877.03	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.437;DP=820;FS=20.094;HRun=0;HaplotypeScore=200.2107;InbreedingCoeff=0.9495;MQ=69.53;MQ0=6;MQRankSum=-3.023;QD=23.02;ReadPosRankSum=1.893;VQSLOD=1.8368;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:65:87.96:0,88,1157	1/1:5,6:11:24.95:328,25,0	0/0:46,0:35:72.59:0,73,1163	0/0:30,0:21:36:0,36,497	0/0:24,0:24:66.23:0,66,1522	0/0:24,0:24:50.12:0,50,772	0/0:19,0:21:51:0,51,823	0/0:45,0:45:99:0,107,1618	0/0:23,0:23:66.20:0,66,1393	1/1:51,0:51:99:1707,141,0	1/1:26,0:25:5.97:65,6,0	0/0:37,0:37:99:0,102,2055	0/0:16,0:16:45.14:0,45,929	0/0:16,0:16:39.13:0,39,878	0/0:30,0:29:84.26:0,84,1651	0/0:36,0:36:99:0,105,2041	1/1:17,3:20:38.94:504,39,0	1/1:13,4:17:38.89:442,39,0	0/0:18,0:18:37.82:0,38,574	0/0:32,0:31:19.99:0,20,237	0/0:32,0:32:66.12:0,66,980	0/0:32,0:32:56.74:0,57,751	0/0:34,0:32:78.19:0,78,1259	0/0:27,0:27:69.17:0,69,1336	0/0:22,0:22:60.13:0,60,1208	0/0:41,0:41:99:0,119,2004	0/0:33,0:30:13.72:0,14,185	0/0:10,0:10:7.24:0,7,92
chr10	87272081	.	ATCTATCTG	A	5566.59	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.612;DP=825;FS=14.645;HRun=0;HaplotypeScore=245.3752;InbreedingCoeff=0.9334;MQ=68.09;MQ0=7;MQRankSum=-3.038;QD=44.53;ReadPosRankSum=0.539;VQSLOD=3.0596;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:68,0:67:79.65:0,80,1694	1/1:11,0:11:27.07:598,27,0	0/0:44,0:33:68.97:0,69,1606	0/0:30,0:21:39.61:0,40,708	0/0:24,0:24:66.23:0,66,2526	0/0:24,0:24:2.41:0,2,1173	0/0:23,0:22:51.53:0,52,1292	0/0:46,0:46:99:0,117,2468	0/0:24,0:24:69.22:0,69,2331	1/1:1,51:52:99:3232,150,0	1/1:3,23:24:17.76:255,18,0	0/0:34,0:34:99:0,102,3384	0/0:15,0:15:45.14:0,45,1509	0/0:16,0:16:39.13:0,39,1458	0/0:29,0:28:84.29:0,84,2740	0/0:37,0:37:99:0,108,3384	1/1:20,0:20:41.60:809,42,0	1/1:16,0:16:39:672,39,0	0/0:17,0:17:41.82:0,42,876	0/0:33,0:32:22.32:0,22,381	0/0:33,0:33:66.19:0,66,1521	0/0:33,0:33:59.76:0,60,1077	0/0:35,0:33:81.19:0,81,2021	0/0:26,0:26:69.21:0,69,2183	0/0:22,0:22:63.14:0,63,2000	0/0:41,0:41:99:0,119,3175	0/0:36,0:33:16.47:0,16,276	0/0:10,0:10:7.27:0,7,162
chr10	87272093	.	GTCTGTCTA	G	2320.12	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=11.668;DP=799;FS=6.150;HRun=0;HaplotypeScore=247.2365;InbreedingCoeff=0.5104;MQ=58.38;MQ0=9;MQRankSum=-3.589;QD=13.41;ReadPosRankSum=2.215;VQSLOD=2.0427;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:59:0.05:0,0,455	1/1:2,5:8:23.99:418,24,0	0/0:29,0:18:27.04:0,27,416	0/1:24,0:16:0.80:1,0,142	0/0:26,0:26:75.17:0,75,2337	0/1:23,0:23:4.71:5,0,529	0/0:25,0:24:45.81:0,46,472	0/0:51,0:51:99:0,143,1133	0/0:25,0:25:72.12:0,72,2122	0/1:55,0:55:84.10:1103,0,84	0/1:27,0:25:36.74:94,0,37	0/0:34,0:34:99:0,99,2493	0/0:17,0:17:50.90:0,51,1449	0/0:15,0:15:45.09:0,45,1323	0/0:30,0:29:78.09:0,78,1749	0/0:33,0:33:96.12:0,96,2506	1/1:17,3:20:23.54:480,24,0	1/1:12,4:16:38.79:373,39,0	0/0:16,0:16:33.27:0,33,389	0/0:32,0:31:15.75:0,16,131	0/0:28,0:28:50.93:0,51,622	0/0:33,0:33:47.61:0,48,470	0/0:34,0:32:67.71:0,68,924	0/0:28,0:28:60.09:0,60,1599	0/0:24,0:24:69.14:0,69,2000	0/0:40,0:40:99:0,117,2057	0/0:34,0:32:10.24:0,10,126	0/0:11,0:10:9.03:0,9,221
chr10	87272097	.	G	GTCTGTCTATCTA	6307.46	PASS	AB=0.775;AC=21;AF=0.375;AN=56;BaseQRankSum=-4.148;DP=817;FS=19.683;HRun=0;HaplotypeScore=293.2235;InbreedingCoeff=0.7292;MQ=57.89;MQ0=9;MQRankSum=-0.662;QD=15.73;ReadPosRankSum=-4.414;VQSLOD=1.3007;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:59:67.99:501,68,0	0/0:8,0:8:3.39:0,3,161	0/0:27,0:17:42.05:0,42,414	0/0:24,0:16:28.68:0,29,265	0/0:26,0:26:75.09:0,75,1709	0/1:16,0:28:99:269,0,256	0/1:24,0:23:7.30:7,0,283	1/1:52,0:52:99:819,110,0	0/0:24,0:24:69.11:0,69,1586	0/0:54,0:54:99:0,139,2075	0/0:30,0:28:18.05:0,18,292	0/0:34,0:34:99:0,99,1910	0/0:16,0:16:47.82:0,48,1025	0/0:15,0:15:45.08:0,45,1120	0/0:18,0:31:76.66:0,77,562	0/0:34,0:34:99:0,99,1955	0/0:21,0:21:33.08:0,33,372	0/0:17,0:17:10.17:0,10,242	1/1:14,0:14:32.19:611,32,0	1/1:3,28:34:12:204,12,0	1/1:26,0:26:35.94:345,36,0	0/1:14,0:35:99:403,0,171	1/1:33,0:31:68.77:986,69,0	0/0:13,0:30:33.14:0,33,459	0/0:24,0:24:69.14:0,69,1556	1/1:3,0:43:99:1639,112,0	1/1:6,20:38:8.73:267,9,0	1/1:1,0:10:9.03:258,9,0
chr10	87272457	.	GTGTGTA	G	2206.87	PASS	AB=0.963;AC=13;AF=0.232;AN=56;BaseQRankSum=9.155;DP=654;FS=0.000;HRun=0;HaplotypeScore=136.7258;InbreedingCoeff=0.8568;MQ=64.20;MQ0=14;MQRankSum=-9.611;QD=13.37;ReadPosRankSum=-0.187;VQSLOD=2.4718;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,19:32:18.06:335,18,0	1/1:3,5:9:21.06:378,21,0	0/0:35,0:21:23.60:0,24,518	0/0:39,0:29:45.05:0,45,1096	0/0:34,0:34:84.27:0,84,2594	0/0:17,0:17:30.10:0,30,1003	0/0:12,0:12:30.09:0,30,833	0/0:36,0:34:57.17:0,57,1629	0/0:23,0:22:54.17:0,54,1616	1/1:16,11:27:24.01:412,24,0	1/1:2,8:10:3.01:38,3,0	0/0:21,0:21:57.18:0,57,1789	0/0:19,0:19:48.16:0,48,1307	0/0:16,0:16:33.07:0,33,934	0/0:29,0:28:69.19:0,69,1982	0/0:17,0:16:39.13:0,39,1303	1/1:9,23:32:36.02:718,36,0	1/1:9,19:28:26.94:494,27,0	0/0:30,0:25:33.07:0,33,773	0/0:16,0:16:30.10:0,30,901	0/0:30,0:28:54.64:0,55,1710	0/0:21,0:21:42.11:0,42,1167	0/0:20,0:19:30.10:0,30,956	0/0:19,0:19:48.16:0,48,1563	0/0:25,0:24:48.12:0,48,1264	0/1:25,0:25:15.67:16,0,1160	0/0:22,0:22:45.15:0,45,1460	0/0:8,0:8:12.04:0,12,363
chr10	87272498	.	G	GGT	1168.04	PASS	AB=0.864;AC=23;AF=0.442;AN=52;BaseQRankSum=1.314;DP=713;FS=2.401;HRun=0;HaplotypeScore=129.3150;InbreedingCoeff=0.5145;MQ=45.66;MQ0=73;MQRankSum=-2.666;QD=3.11;ReadPosRankSum=-1.855;VQSLOD=2.5324;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:42,1:44:21.38:203,21,0	0/0:12,0:11:11.97:0,12,115	./.	./.	0/0:27,0:26:9.02:0,9,98	0/1:9,8:16:20.48:122,0,20	1/1:16,1:18:9:112,9,0	1/1:40,0:29:6.93:33,7,0	0/0:24,0:23:17.71:0,18,176	0/1:26,0:21:3.51:4,0,29	0/0:21,0:18:11.22:0,11,88	0/1:26,1:24:27.12:27,0,132	0/0:18,0:16:14.87:0,15,144	0/0:18,0:18:23.89:0,24,241	0/0:28,0:27:24.06:0,24,260	0/0:22,0:20:27.07:0,27,292	0/0:33,0:30:11.15:0,11,240	0/0:30,0:30:30.61:0,31,264	1/1:28,0:19:5.96:45,6,0	1/1:9,0:13:4.56:45,5,0	1/1:40,1:36:17.02:185,17,0	1/1:21,0:17:2.89:66,3,0	0/1:14,5:17:20.47:121,0,20	0/0:33,0:36:50.84:0,51,479	0/0:18,0:16:24.06:0,24,260	0/1:31,1:29:4.79:196,0,5	1/1:13,3:22:12.48:124,12,0	1/1:4,2:6:6.01:71,6,0
chr10	87273065	.	A	AGTACAGGGATCACAT	32396.11	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=2.950;DP=569;FS=5.945;HRun=0;HaplotypeScore=229.3106;InbreedingCoeff=0.9825;MQ=80.61;MQ0=0;MQRankSum=-15.968;QD=121.79;ReadPosRankSum=-2.849;VQSLOD=3.4812;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:69.18:3837,69,0	1/1:5,2:9:15.52:1100,16,0	0/0:18,0:18:38.18:0,38,1501	0/0:21,0:21:57.16:0,57,1848	0/0:11,0:11:24.08:0,24,1045	0/0:14,0:14:39.13:0,39,1652	0/0:30,0:30:84.22:0,84,2979	1/1:31,0:31:81.26:4095,81,0	0/0:17,0:17:51.18:0,51,2146	1/1:11,4:15:42.14:2568,42,0	1/1:13,3:17:21.07:1534,21,0	0/0:28,0:28:75.26:0,75,3225	0/0:22,0:22:60.19:0,60,2487	0/0:23,0:23:63.20:0,63,2519	0/0:31,0:31:90.30:0,90,3591	0/0:21,0:21:63.17:0,63,2397	1/1:17,4:24:48.16:2910,48,0	1/1:14,6:22:42.14:3085,42,0	1/1:17,4:26:60.17:2710,60,0	1/1:5,6:14:27.02:1777,27,0	1/1:25,5:33:45.02:2403,45,0	0/0:10,0:10:30.10:0,30,1199	0/0:13,0:13:33.11:0,33,1221	0/0:27,0:27:72.25:0,72,2881	0/0:17,0:17:51.18:0,51,2102	1/1:11,8:19:54.19:3705,54,0	1/1:9,5:16:33.58:2388,34,0	1/1:10,0:10:6.02:283,6,0
chr10	87273337	.	CGTGTGTGTGT	C	1464.31	PASS	AB=0.986;AC=15;AF=0.268;AN=56;BaseQRankSum=5.598;DP=628;FS=3.329;HRun=0;HaplotypeScore=184.2734;InbreedingCoeff=0.2776;MQ=57.89;MQ0=13;MQRankSum=-5.423;QD=7.59;ReadPosRankSum=-2.649;VQSLOD=2.2160;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:40:15.76:0,16,705	0/0:14,0:11:21.07:0,21,692	0/0:44,0:20:54.18:0,54,1430	0/0:47,0:29:74.36:0,74,1676	0/0:10,0:10:21.07:0,21,856	1/1:11,5:16:3.62:378,4,0	0/1:16,2:18:13.10:114,0,13	0/1:17,0:17:99:173,0,316	0/0:14,0:14:30.03:0,30,924	0/0:18,0:18:51.15:0,51,1817	0/0:14,0:14:21.07:0,21,731	0/0:33,0:33:79.58:0,80,3169	0/0:18,0:18:54.19:0,54,2080	0/0:20,0:20:57.20:0,57,2111	0/0:26,0:26:72.25:0,72,2783	0/0:11,0:11:33.11:0,33,1472	0/0:35,0:35:86.15:0,86,3194	0/0:21,0:21:63.18:0,63,2262	0/1:13,0:11:99:164,0,184	0/1:13,0:13:14.31:14,0,35	0/1:46,0:42:37.99:38,0,174	1/1:7,3:10:16.26:307,16,0	1/1:7,4:11:13.59:247,14,0	0/0:47,0:47:99:0,126,5056	0/0:21,0:21:51.17:0,51,1920	0/1:27,0:25:99:158,0,575	0/1:17,0:16:5.60:6,0,209	1/1:5,0:5:0.54:28,1,0
chr10	87273346	.	GTGCC	G	2511.37	PASS	AB=0.870;AC=21;AF=0.375;AN=56;BaseQRankSum=10.009;DP=613;FS=10.564;HRun=0;HaplotypeScore=125.1340;InbreedingCoeff=0.6886;MQ=52.79;MQ0=17;MQRankSum=-4.969;QD=10.51;ReadPosRankSum=-2.587;VQSLOD=2.1225;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:40.35:0,40,647	0/0:15,0:12:26.44:0,26,398	0/0:37,0:15:28.94:0,29,566	0/1:43,0:22:29.20:29,0,497	0/0:10,1:11:21.07:0,21,458	1/1:21,0:21:27.07:289,27,0	1/1:23,0:22:24.01:226,24,0	0/1:18,0:18:53.40:403,0,53	0/0:15,0:15:21.10:0,21,368	0/0:19,0:18:47.94:0,48,746	0/0:13,0:13:24.07:0,24,380	0/0:32,1:33:60.24:0,60,1372	0/0:20,0:20:18.54:0,19,1123	0/0:23,0:22:59.41:0,59,1154	0/0:29,0:28:71.93:0,72,1420	0/0:10,0:10:30.10:0,30,729	0/0:32,0:32:46.28:0,46,1603	0/0:19,0:19:54.17:0,54,937	0/1:4,7:9:19.78:280,0,20	1/1:1,11:12:2.68:58,3,0	1/1:9,34:39:8.92:103,9,0	1/1:8,0:8:9.02:97,9,0	1/1:14,0:14:11.95:114,12,0	0/0:45,0:45:92.96:0,93,2290	0/0:16,3:19:31.52:0,32,744	1/1:23,1:22:59.41:774,59,0	1/1:4,13:16:20.88:303,21,0	1/1:5,0:5:3.01:37,3,0
chr10	87273349	.	CCT	C	1303.25	PASS	AB=0.993;AC=23;AF=0.411;AN=56;BaseQRankSum=12.614;DP=605;FS=4.461;HRun=0;HaplotypeScore=108.8949;InbreedingCoeff=0.7159;MQ=51.78;MQ0=18;MQRankSum=-1.978;QD=5.30;ReadPosRankSum=-1.009;VQSLOD=2.8724;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:27.49:0,27,376	0/0:15,0:12:15.63:0,16,252	0/0:37,0:14:34.51:0,35,293	0/1:42,1:17:1.38:1,0,233	0/0:14,0:14:27.07:0,27,428	1/1:5,10:20:26.21:234,26,0	1/1:7,12:20:20.82:260,21,0	0/1:16,0:16:6.90:188,0,7	0/1:15,0:15:5.31:5,0,163	0/0:17,0:16:17.34:0,17,368	0/0:13,0:13:15.30:0,15,221	0/0:33,0:33:43.38:0,43,915	0/0:18,1:19:17.01:0,17,774	0/0:22,0:21:59.26:0,59,723	0/0:27,0:26:55.46:0,55,951	0/0:10,0:10:30.07:0,30,503	0/0:34,0:34:48.27:0,48,1118	0/0:20,0:20:16.48:0,16,479	1/1:10,0:8:1.76:119,2,0	1/1:11,0:11:2.74:12,3,0	1/1:41,0:37:8.78:61,9,0	1/1:0,5:8:8.52:43,9,0	1/1:4,5:14:9.36:42,9,0	0/0:43,1:44:42.82:0,43,1430	0/0:18,0:18:26.50:0,26,438	1/1:24,0:22:58.82:400,59,0	1/1:17,0:16:20.11:117,20,0	1/1:5,0:5:2.94:18,3,0
chr10	87273350	.	CTG	C	688.62	PASS	AB=0.933;AC=26;AF=0.520;AN=50;BaseQRankSum=8.002;DP=618;FS=1.206;HRun=0;HaplotypeScore=113.3731;InbreedingCoeff=-0.0134;MQ=51.30;MQ0=18;MQRankSum=-1.146;QD=1.75;ReadPosRankSum=0.058;VQSLOD=1.9215;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:37:12.77:0,13,160	0/1:13,1:11:16.57:17,0,171	./.	./.	0/0:13,0:14:21.03:0,21,257	1/1:20,0:20:24.08:148,24,0	1/1:21,0:20:17.74:153,18,0	0/1:17,0:17:0.87:1,0,27	0/1:7,1:15:20.25:28,0,20	0/1:15,2:16:72.74:73,0,112	0/1:11,2:13:24.22:24,0,55	0/0:33,0:34:10.89:0,11,523	0/0:18,0:19:13.52:0,14,572	0/0:21,0:20:27.05:0,27,329	0/1:25,2:26:22.17:22,0,527	0/0:10,0:10:21.07:0,21,320	0/1:33,3:36:37.76:38,0,719	0/1:20,2:22:55.31:55,0,205	0/1:10,0:8:0.25:3,0,0	1/1:12,0:12:2.43:9,2,0	1/1:42,0:38:2.48:9,2,0	1/1:8,0:8:8.52:42,9,0	1/1:14,0:14:2.40:23,2,0	0/1:42,3:45:82.79:83,0,885	0/1:15,2:18:57.38:57,0,204	1/1:25,0:23:2.29:28,2,0	0/1:18,0:17:21.68:32,0,22	./.
chr10	87274189	.	TA	T	1200.50	PASS	AB=0.850;AC=30;AF=0.536;AN=56;BaseQRankSum=6.131;DP=603;FS=2.876;HRun=16;HaplotypeScore=78.9315;InbreedingCoeff=0.3954;MQ=71.17;MQ0=2;MQRankSum=1.266;QD=2.95;ReadPosRankSum=4.704;VQSLOD=-0.0616;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:35:34.91:101,35,0	1/1:3,0:4:2.01:6,2,0	0/0:32,0:19:3.12:0,3,104	0/1:21,0:15:11.69:12,0,54	0/0:14,0:15:6.09:0,6,159	0/0:17,4:22:5.12:0,5,275	0/1:19,2:22:15.96:16,0,146	1/1:16,12:29:25.99:153,26,0	0/0:14,1:16:10.79:0,11,190	1/1:11,0:22:6.93:36,7,0	1/1:3,0:13:16.71:47,17,0	0/1:21,5:26:16.29:16,0,266	0/0:16,0:17:14.79:0,15,214	0/1:21,1:22:2.43:2,0,188	0/0:23,3:27:5.57:0,6,236	0/1:23,4:27:6.33:6,0,360	1/1:4,0:23:27.99:80,28,0	1/1:8,0:18:19.87:57,20,0	0/1:15,7:26:29.43:136,0,29	1/1:15,3:20:17.20:101,17,0	1/1:4,7:11:14.61:90,15,0	0/1:13,1:14:5.37:5,0,95	0/0:13,1:14:9.96:0,10,155	0/0:28,0:29:35.25:0,35,313	0/0:19,1:23:17.39:0,17,259	1/1:12,14:27:25.39:214,25,0	1/1:14,8:28:18.59:178,19,0	0/1:7,11:18:0.21:129,0,0
chr10	87277203	.	A	ATG	1107.23	PASS	AB=1.000;AC=31;AF=0.816;AN=38;BaseQRankSum=-1.875;DP=588;FS=9.286;HRun=0;HaplotypeScore=81.9907;InbreedingCoeff=0.4529;MQ=67.70;MQ0=14;MQRankSum=1.782;QD=3.38;ReadPosRankSum=-0.162;VQSLOD=1.2281;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:7,0:7:9.03:121,9,0	./.	./.	1/1:14,0:14:8.99:76,9,0	1/1:23,0:22:9.01:95,9,0	1/1:25,0:24:0.43:1,0,0	./.	1/1:27,0:27:3.01:43,3,0	1/1:16,0:16:9.02:95,9,0	1/1:11,0:11:3:25,3,0	./.	1/1:8,2:13:3.01:43,3,0	0/1:17,0:17:0:0,0,0	0/0:20,1:25:2.99:0,3,31	1/1:23,0:23:5.89:78,6,0	1/1:35,0:35:15.05:199,15,0	1/1:26,0:26:24.46:237,24,0	1/1:12,0:11:0.42:1,0,0	./.	0/0:60,0:63:5.44:0,5,24	1/1:15,0:15:9.02:110,9,0	./.	1/1:36,7:46:6.02:87,6,0	./.	1/1:17,0:15:0.47:2,0,0	./.	0/0:5,0:6:2.84:0,3,14
chr10	87278581	.	G	GA	1931.72	PASS	AB=0.556;AC=9;AF=0.161;AN=56;BaseQRankSum=-1.759;DP=676;FS=1.389;HRun=10;HaplotypeScore=78.1400;InbreedingCoeff=0.8820;MQ=78.55;MQ0=3;MQRankSum=-0.439;QD=20.55;ReadPosRankSum=-0.276;VQSLOD=4.2894;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:58:99:0,156,1221	0/1:1,4:5:3.68:112,0,4	0/0:34,0:29:7.39:0,7,210	0/0:31,0:24:28.03:0,28,222	0/0:13,0:13:29.96:0,30,246	0/0:21,0:21:47.28:0,47,377	0/0:24,1:25:34.15:0,34,483	0/0:28,0:30:35.51:0,36,457	0/0:17,0:17:26.94:0,27,222	1/1:3,21:24:38.09:580,38,0	1/1:1,12:13:35.97:345,36,0	0/0:20,0:21:55.96:0,56,446	0/0:21,1:23:33.14:0,33,419	0/0:23,0:23:62.84:0,63,504	0/0:22,0:22:59.89:0,60,485	0/0:27,0:27:45.49:0,45,567	1/1:5,24:29:14.01:555,14,0	1/1:3,19:23:34.41:503,34,0	0/0:29,0:29:31.43:0,31,399	0/0:19,1:20:22.13:0,22,382	0/0:33,0:33:83.84:0,84,684	0/0:20,0:21:58.92:0,59,468	0/0:8,0:9:22.95:0,23,169	0/0:23,0:24:61.91:0,62,490	0/0:11,0:11:20.96:0,21,170	0/0:41,2:43:44.29:0,44,769	0/0:33,0:33:88.03:0,88,683	0/0:10,0:10:20.97:0,21,172
chr10	87279061	.	G	GA	3605.29	PASS	AB=0.886;AC=11;AF=0.196;AN=56;BaseQRankSum=-11.272;DP=690;FS=5.022;HRun=5;HaplotypeScore=69.4368;InbreedingCoeff=0.8866;MQ=86.28;MQ0=0;MQRankSum=-1.581;QD=26.13;ReadPosRankSum=0.223;VQSLOD=3.4109;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,146,1551	1/1:1,12:13:30.10:395,30,0	0/0:32,0:32:51.08:0,51,600	0/0:26,0:24:59.89:0,60,588	0/0:25,0:25:63.16:0,63,677	0/0:17,0:17:48.12:0,48,515	0/0:24,0:24:66.16:0,66,707	0/0:24,0:24:60.12:0,60,620	0/0:34,0:34:99:0,99,1056	1/1:1,26:27:78.24:1011,78,0	1/1:0,13:13:33.11:434,33,0	0/0:30,0:30:84.21:0,84,903	0/0:17,0:17:51.09:0,51,530	0/0:26,0:26:66.14:0,66,694	0/0:19,0:19:54.13:0,54,580	0/0:25,0:25:72.14:0,72,756	1/1:2,29:31:72.23:947,72,0	1/1:3,20:23:57.19:750,57,0	0/0:18,0:18:51.11:0,51,539	0/0:21,0:21:57.14:0,57,612	0/0:31,0:31:81.20:0,81,870	0/0:16,0:16:45.07:0,45,483	0/0:14,0:14:33.97:0,34,356	0/0:37,0:37:99:0,105,1114	0/0:25,0:25:69.17:0,69,740	0/1:27,4:30:67.70:68,0,737	0/0:25,0:25:69.17:0,69,741	0/0:12,0:12:33.08:0,33,354
chr10	87280062	.	CT	C	901.16	PASS	AB=0.744;AC=23;AF=0.411;AN=56;BaseQRankSum=3.223;DP=502;FS=10.547;HRun=14;HaplotypeScore=54.3287;InbreedingCoeff=0.5892;MQ=64.01;MQ0=9;MQRankSum=-1.086;QD=3.72;ReadPosRankSum=3.899;VQSLOD=-0.5493;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,16:28:14.65:98,15,0	1/1:3,5:6:5.93:41,6,0	0/0:18,0:11:15.34:0,15,115	0/0:8,1:6:8.93:0,9,69	0/0:24,0:26:37.61:0,38,447	0/0:19,0:19:21.35:0,21,317	0/0:22,1:25:24.26:0,24,347	0/1:16,8:21:18.79:41,0,19	0/0:14,0:15:26.18:0,26,269	1/1:14,12:25:24.65:151,25,0	1/1:8,1:12:9.65:52,10,0	0/0:15,0:16:26.07:0,26,244	0/1:12,0:13:6.44:6,0,111	0/0:14,1:13:18:0,18,160	0/0:12,0:14:22.92:0,23,213	0/0:19,0:18:13.40:0,13,260	1/1:6,12:20:26.86:161,27,0	1/1:4,11:15:22.77:146,23,0	1/1:11,4:13:7.94:60,8,0	1/1:4,10:15:22.44:133,22,0	0/1:11,4:13:11.51:14,0,12	0/0:17,0:18:36.84:0,37,317	0/0:16,0:17:25:0,25,198	0/0:21,0:21:29.83:0,30,245	0/0:26,1:27:6.83:0,7,186	1/1:7,10:14:14.77:103,15,0	0/1:4,9:12:13.25:49,0,13	0/1:6,5:9:16:50,0,16
chr10	87280847	.	C	CGGAGGTGGA	1248.39	PASS	AC=8;AF=0.182;AN=44;BaseQRankSum=-2.325;DP=223;FS=0.000;HRun=0;HaplotypeScore=63.8814;InbreedingCoeff=0.6724;MQ=104.90;MQ0=0;MQRankSum=-4.845;QD=32.01;ReadPosRankSum=-2.520;VQSLOD=2.2102;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:6.02:0,6,145	0/0:4,0:4:6.02:0,6,154	0/0:16,0:16:33.11:0,33,844	0/0:14,0:14:30.07:0,30,681	0/0:4,0:4:3.01:0,3,85	0/0:5,0:5:9.03:0,9,256	0/0:20,0:20:45.15:0,45,1221	./.	0/0:6,0:6:15.03:0,15,329	0/0:5,0:5:6.02:0,6,142	./.	0/0:10,0:10:24.08:0,24,631	0/0:8,0:8:18.06:0,18,512	0/0:6,0:6:15.05:0,15,414	0/0:13,0:13:33.11:0,33,910	0/0:7,0:7:15.05:0,15,389	0/0:12,0:12:30.09:0,30,765	0/0:8,0:8:18.06:0,18,512	1/1:14,2:16:24.08:747,24,0	./.	1/1:16,2:18:3.01:73,3,0	./.	./.	0/0:11,0:11:24.08:0,24,657	0/0:4,0:4:3.01:0,3,85	./.	1/1:1,3:4:9.03:417,9,0	1/1:0,1:1:3.01:139,3,0
chr10	87281300	.	A	AGAGG	955.42	PASS	AB=0.882;AC=7;AF=0.140;AN=50;BaseQRankSum=-3.715;DP=402;FS=4.562;HRun=0;HaplotypeScore=69.7883;InbreedingCoeff=0.5995;MQ=63.48;MQ0=9;MQRankSum=0.175;QD=18.37;ReadPosRankSum=0.230;VQSLOD=2.4860;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:72.20:0,72,1096	./.	0/0:18,0:10:5.99:0,6,52	0/0:24,0:16:12:0,12,158	0/0:6,0:6:12.03:0,12,172	0/0:7,0:7:12:0,12,167	0/0:31,0:30:66.18:0,66,1012	0/0:14,0:14:3.01:0,3,49	0/0:22,0:22:48.12:0,48,743	1/1:2,5:8:14.79:240,15,0	./.	0/0:15,0:15:27.09:0,27,442	0/0:9,0:9:21.04:0,21,315	0/0:20,0:20:48.13:0,48,719	0/0:22,0:21:47.81:0,48,718	0/0:22,0:22:48.15:0,48,733	1/1:6,16:22:27.09:643,27,0	1/1:4,3:6:5.89:88,6,0	0/0:17,0:15:15.04:0,15,218	0/0:2,0:2:3.01:0,3,49	0/0:40,0:38:72.22:0,72,1112	0/0:7,0:7:18.03:0,18,264	0/0:2,0:2:6.01:0,6,74	0/0:14,0:14:15.39:0,15,371	./.	0/1:13,2:15:99:119,0,314	0/0:11,0:11:30.10:0,30,485	0/0:2,0:2:6.02:0,6,95
chr10	87281729	.	CT	C	2007.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.424;DP=694;FS=21.414;HRun=2;HaplotypeScore=64.5782;InbreedingCoeff=0.9957;MQ=81.37;MQ0=0;MQRankSum=-4.620;QD=33.46;ReadPosRankSum=0.538;VQSLOD=1.7918;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,60:60:99:2103,163,0	0/0:15,0:15:45.15:0,45,674	0/0:24,0:24:45.82:0,46,896	0/0:15,0:15:39.09:0,39,505	0/0:22,0:22:63.21:0,63,944	0/0:14,0:14:42.14:0,42,629	0/0:19,0:19:54.15:0,54,768	0/0:23,0:23:69.23:0,69,1034	0/0:22,0:22:66.21:0,66,968	0/0:28,0:28:81.27:0,81,1201	0/0:15,0:15:45.15:0,45,674	0/0:24,0:24:72.23:0,72,1058	0/0:22,0:22:63.20:0,63,924	0/0:22,0:22:60.20:0,60,899	0/0:20,0:20:60.18:0,60,861	0/0:20,0:20:60.19:0,60,878	0/0:28,0:28:84.26:0,84,1236	0/0:28,0:28:84.28:0,84,1253	0/0:26,0:26:75.25:0,75,1107	0/0:12,0:12:36.09:0,36,500	0/0:61,0:61:99:0,184,2742	0/0:25,0:25:75.25:0,75,1123	0/0:21,0:21:63.20:0,63,926	0/0:31,0:31:93.30:0,93,1375	0/0:24,0:24:69.18:0,69,992	0/0:29,0:28:87.29:0,87,1303	0/0:37,0:37:99:0,108,1542	0/0:7,0:7:21.07:0,21,313
chr10	87283055	.	C	CTGTG	9836.72	PASS	AB=0.932;AC=13;AF=0.232;AN=56;BaseQRankSum=-8.335;DP=1169;FS=2.734;HRun=0;HaplotypeScore=204.6692;InbreedingCoeff=0.8950;MQ=60.11;MQ0=8;MQRankSum=-1.892;QD=37.40;ReadPosRankSum=1.426;VQSLOD=5.1870;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,58:68:99:2771,111,0	1/1:5,8:13:18.06:420,18,0	0/0:41,0:18:24.93:0,25,369	0/0:66,0:32:16.72:0,17,614	0/0:23,0:23:57.16:0,57,933	0/0:29,0:29:74.04:0,74,1086	0/0:36,0:36:74.29:0,74,1337	0/0:62,0:61:99:0,126,2019	0/0:44,0:44:99:0,118,2034	1/1:20,22:42:99:2337,108,0	1/1:9,7:16:26.87:584,27,0	0/0:52,0:52:99:0,144,2429	0/0:49,0:49:99:0,132,2225	0/0:37,0:37:99:0,102,1652	0/0:56,0:56:99:0,147,2444	0/0:40,0:40:99:0,99,1734	1/1:10,22:32:78.24:1836,78,0	1/1:18,17:36:89.53:1732,90,0	0/0:32,0:30:72.16:0,72,1111	0/0:24,0:24:60.10:0,60,927	0/0:114,0:113:99:0,300,4912	0/0:36,0:36:99:0,102,1605	0/0:31,0:31:84.09:0,84,1380	0/0:69,0:68:99:0,171,2807	0/0:34,0:34:96.28:0,96,1536	0/1:51,4:54:99:158,0,1989	0/0:21,0:21:63.17:0,63,1019	0/0:7,0:7:21.07:0,21,362
chr10	87283128	.	CTG	C	4053.27	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.862;DP=1307;FS=0.357;HRun=0;HaplotypeScore=172.9643;InbreedingCoeff=0.9925;MQ=56.09;MQ0=46;MQRankSum=2.774;QD=26.67;ReadPosRankSum=1.506;VQSLOD=4.3796;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:87.30:0,87,1472	1/1:2,4:6:14.96:173,15,0	0/0:90,0:10:16.87:0,17,244	0/0:118,1:29:33.83:0,34,617	0/0:27,0:27:66.21:0,66,1083	0/0:23,0:23:57.18:0,57,929	0/0:48,0:48:99:0,105,1745	0/0:68,0:66:99:0,146,2280	0/0:47,0:47:99:0,126,2024	1/1:11,44:52:41.43:1387,41,0	1/1:1,15:15:21.07:273,21,0	0/0:49,0:50:99:0,135,2172	0/0:52,0:52:99:0,138,2199	0/0:40,0:40:99:0,99,1666	0/0:53,0:53:99:0,144,2260	0/0:51,0:51:99:0,105,1968	1/1:6,29:34:83.78:1090,84,0	1/1:16,24:39:84.94:1130,85,0	0/0:39,0:37:81.21:0,81,1289	0/0:29,0:29:78.02:0,78,1227	0/0:105,0:103:99:0,250,4134	0/0:37,0:37:93.30:0,93,1545	0/0:30,0:30:75.19:0,75,1169	0/0:71,2:72:48.50:0,48,2384	0/0:28,0:28:72.21:0,72,1166	0/0:65,1:63:90.28:0,90,2477	0/0:20,0:20:60.15:0,60,954	0/0:9,0:9:27.09:0,27,453
chr10	87283138	.	GTC	G	1102.44	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=16.395;DP=1300;FS=2.986;HRun=0;HaplotypeScore=183.0363;InbreedingCoeff=0.5146;MQ=58.42;MQ0=43;MQRankSum=0.184;QD=6.98;ReadPosRankSum=3.085;VQSLOD=3.1229;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:99:0,99,1715	0/1:8,0:8:13.85:52,0,14	0/0:90,0:16:31.57:0,32,378	0/0:116,1:33:48.19:0,48,758	0/0:26,0:26:72.17:0,72,1221	0/0:23,0:23:60.16:0,60,1055	0/0:44,0:44:90.32:0,90,1939	0/0:67,0:65:99:0,163,2766	0/0:47,0:47:99:0,135,2411	0/1:53,0:52:69.58:350,0,70	1/1:15,0:14:20:103,20,0	0/0:52,0:52:99:0,147,2625	0/0:49,0:49:99:0,144,2610	0/0:39,0:39:99:0,102,1885	0/0:52,0:52:99:0,147,2511	0/0:45,1:46:79.43:0,79,2205	0/1:41,0:40:38.71:338,0,39	1/1:40,1:40:20.39:401,20,0	0/0:36,0:35:96.17:0,96,1541	0/0:33,0:33:77.40:0,77,1485	0/0:112,0:110:99:0,304,5084	0/0:35,0:35:99:0,99,1806	0/0:30,0:30:81.26:0,81,1468	0/0:72,0:72:99:0,135,2939	0/0:28,1:29:78.01:0,78,1342	0/0:63,0:60:99:0,154,3059	0/0:25,0:25:75.17:0,75,1233	0/0:10,0:10:29.75:0,30,465
chr10	87283472	.	CTGTGTA	C	5647.18	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.931;DP=1059;FS=18.915;HRun=0;HaplotypeScore=281.8220;InbreedingCoeff=0.9966;MQ=63.71;MQ0=0;MQRankSum=-9.039;QD=37.90;ReadPosRankSum=-2.904;VQSLOD=2.7193;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,132,3855	1/1:2,7:9:18.03:365,18,0	0/0:51,0:37:68.53:0,69,2068	0/0:40,0:32:44.96:0,45,1088	0/0:15,0:15:42.14:0,42,1328	0/0:26,0:26:54.19:0,54,1750	0/0:31,0:31:89.32:0,89,2589	0/0:53,0:53:99:0,141,4095	0/0:37,0:37:99:0,99,3200	1/1:5,50:55:99:2630,144,0	1/1:6,18:24:24:454,24,0	0/0:57,0:57:99:0,136,4888	0/0:40,0:40:99:0,105,3264	0/0:34,0:34:90.28:0,90,2786	0/0:54,0:54:99:0,138,4363	0/0:43,0:43:99:0,114,3719	1/1:17,14:31:60.47:1024,60,0	1/1:21,9:30:33.35:1174,33,0	0/0:24,0:23:59.55:0,60,1550	0/0:30,0:30:75.26:0,75,2370	0/0:72,0:72:99:0,186,5485	0/0:28,0:28:78.24:0,78,2460	0/0:35,0:35:96.33:0,96,3125	0/0:62,0:62:99:0,156,4786	0/0:28,0:28:62.77:0,63,2301	0/0:61,1:62:49.64:0,50,4711	0/0:33,0:33:90.31:0,90,2911	0/0:7,0:7:21.07:0,21,496
chr10	87283695	.	T	TC	2089.85	PASS	AB=0.970;AC=11;AF=0.196;AN=56;BaseQRankSum=8.703;DP=593;FS=1.359;HRun=0;HaplotypeScore=103.8714;InbreedingCoeff=0.8616;MQ=54.80;MQ0=19;MQRankSum=-2.976;QD=14.93;ReadPosRankSum=5.032;VQSLOD=5.5019;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:67.17:0,67,428	1/1:3,3:6:18:160,18,0	0/0:6,0:3:8.23:0,8,65	0/0:16,0:8:17.39:0,17,128	0/0:18,0:18:40.38:0,40,398	0/0:24,0:23:53.92:0,54,557	0/0:21,0:21:53.64:0,54,593	0/0:25,0:24:59.87:0,60,554	0/0:15,0:15:25.63:0,26,303	1/1:11,20:31:90.43:724,90,0	1/1:2,17:18:44.54:361,45,0	0/0:27,0:26:48.43:0,48,559	0/0:16,0:16:41.92:0,42,400	0/0:10,0:9:20.72:0,21,217	0/0:39,0:39:94.32:0,94,961	0/0:22,0:22:42.43:0,42,395	1/1:10,23:30:84.02:668,84,0	1/1:8,11:18:41.79:344,42,0	0/0:32,0:29:75.49:0,75,751	0/0:21,0:21:49.22:0,49,438	0/0:7,0:7:12.01:0,12,132	0/0:16,0:16:40.82:0,41,390	0/0:18,0:17:37.12:0,37,323	0/0:23,0:21:12.90:0,13,156	0/0:21,0:21:50.75:0,51,427	0/1:31,1:29:11.25:11,0,505	0/0:31,0:31:70.92:0,71,664	0/0:11,0:9:15.65:0,16,148
chr10	87283697	.	T	TC	497.35	PASS	AB=0.673;AC=9;AF=0.161;AN=56;BaseQRankSum=11.289;DP=594;FS=3.665;HRun=0;HaplotypeScore=91.1336;InbreedingCoeff=0.7878;MQ=53.31;MQ0=19;MQRankSum=0.547;QD=4.48;ReadPosRankSum=5.269;VQSLOD=3.2059;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:71.24:0,71,473	1/1:4,3:7:12.50:68,12,0	0/0:5,0:2:5.80:0,6,44	0/0:16,0:8:6.07:0,6,64	0/0:19,0:19:43.37:0,43,427	0/0:23,0:22:59.91:0,60,611	0/0:21,0:21:56.65:0,57,638	0/0:25,0:24:60.73:0,61,575	0/0:15,0:15:28.55:0,29,311	1/1:14,16:31:23.48:195,23,0	1/1:7,12:18:11.61:119,12,0	0/0:27,0:26:56.85:0,57,616	0/0:15,0:15:41.97:0,42,380	0/0:10,0:9:23.66:0,24,224	0/0:39,0:39:99:0,101,1021	0/0:22,0:22:49.86:0,50,458	0/1:17,16:30:20.13:155,0,20	1/1:11,10:19:16.39:118,16,0	0/0:30,0:27:76.31:0,76,794	0/0:22,0:22:50.60:0,51,452	0/0:7,0:7:12:0,12,132	0/0:16,0:16:41.98:0,42,413	0/0:17,0:16:38.80:0,39,339	0/0:23,0:21:15.88:0,16,176	0/0:22,0:22:52.54:0,53,466	0/0:29,1:27:49.17:0,49,605	0/0:30,0:30:70.41:0,70,659	0/0:13,0:11:15.67:0,16,152
chr10	87284158	.	CCTCT	C	1095.95	PASS	AB=0.871;AC=22;AF=0.423;AN=52;BaseQRankSum=3.174;DP=542;FS=8.921;HRun=0;HaplotypeScore=105.2914;InbreedingCoeff=0.3397;MQ=69.00;MQ0=9;MQRankSum=-2.316;QD=4.25;ReadPosRankSum=0.853;VQSLOD=1.2620;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,1:26:32.57:33,0,52	1/1:5,4:8:3.01:47,3,0	./.	./.	0/0:22,0:23:12.24:0,12,191	0/0:17,0:17:15.17:0,15,192	0/0:21,0:30:17.47:0,17,148	1/1:23,0:19:2.60:10,3,0	0/0:21,0:22:27.71:0,28,535	1/1:8,8:17:3.15:354,3,0	1/1:11,4:15:10.57:82,11,0	0/0:20,0:20:15.03:0,15,300	0/0:18,0:18:18.06:0,18,370	0/0:16,0:16:11.78:0,12,222	0/0:12,0:22:15.51:0,16,234	0/0:13,0:13:12.04:0,12,282	1/1:9,8:16:9.03:141,9,0	1/1:8,14:22:12.04:188,12,0	0/1:23,0:20:17.47:17,0,74	0/1:13,0:22:8.03:85,0,8	0/1:22,0:22:16.49:16,0,52	0/0:9,0:15:8.62:0,9,115	0/0:17,0:17:2.62:0,3,69	0/1:14,1:15:61.63:62,0,369	0/0:17,0:17:8.85:0,9,110	0/1:16,0:20:35.90:36,0,62	1/1:13,0:20:19.83:170,20,0	1/1:3,0:6:3:28,3,0
chr10	87286263	.	G	GTT	1852.20	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=2.676;DP=649;FS=0.457;HRun=11;HaplotypeScore=106.0615;InbreedingCoeff=0.9174;MQ=73.71;MQ0=2;MQRankSum=-2.072;QD=23.15;ReadPosRankSum=-3.434;VQSLOD=2.4844;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:37:64.11:0,64,735	1/1:3,3:7:11.53:139,12,0	0/0:25,1:22:34.76:0,35,294	0/0:17,0:15:19.81:0,20,169	0/0:30,0:33:53.24:0,53,533	0/0:14,0:17:26.91:0,27,361	0/0:33,0:33:62.40:0,62,776	0/0:26,0:26:35.39:0,35,519	0/0:30,0:31:68.79:0,69,701	1/1:6,18:24:57.03:680,57,0	1/1:13,3:16:33.89:339,34,0	0/0:33,0:33:74.61:0,75,702	0/0:23,0:23:42.56:0,43,561	0/0:23,0:24:50.81:0,51,576	0/0:17,0:18:38.98:0,39,422	0/0:14,0:14:39.02:0,39,365	1/1:5,19:24:39.13:565,39,0	1/1:1,8:9:23.99:301,24,0	0/0:22,0:25:46.64:0,47,453	0/0:30,0:30:3.22:0,3,400	0/0:26,0:26:56.95:0,57,545	0/0:27,0:27:40.65:0,41,584	0/0:20,0:20:41.71:0,42,407	0/0:25,0:25:45.15:0,45,616	0/0:19,0:21:35.84:0,36,390	0/0:13,0:14:3.81:0,4,168	0/0:27,0:31:56.92:0,57,597	0/0:17,0:17:20.93:0,21,204
chr10	87287339	.	G	GA	2109.35	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-5.736;DP=628;FS=3.207;HRun=10;HaplotypeScore=59.7475;InbreedingCoeff=0.9803;MQ=65.10;MQ0=0;MQRankSum=0.262;QD=17.58;ReadPosRankSum=0.857;VQSLOD=4.3144;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,1:20:34.51:209,35,0	1/1:2,6:8:15.04:158,15,0	0/0:18,0:15:17.59:0,18,194	0/0:6,0:6:8.05:0,8,72	0/0:30,0:31:82.91:0,83,665	0/0:31,0:31:74.87:0,75,612	0/0:12,0:12:29.96:0,30,246	0/0:27,0:27:62.82:0,63,507	0/0:22,0:22:50.90:0,51,415	1/1:7,19:26:35.33:545,35,0	1/1:2,18:21:44.49:428,44,0	0/0:23,0:23:59.89:0,60,489	0/0:21,0:21:53.67:0,54,426	0/0:26,1:29:40.90:0,41,511	0/0:30,0:31:85.89:0,86,688	0/0:28,0:29:73.89:0,74,590	1/1:2,17:21:38.76:380,39,0	1/1:1,23:24:54.14:576,54,0	0/0:21,0:21:40.77:0,41,369	0/0:25,1:27:29.95:0,30,442	0/0:21,0:21:28.79:0,29,393	0/0:23,0:23:62.89:0,63,512	0/0:18,0:18:44.93:0,45,367	0/0:29,0:29:70.45:0,70,570	0/0:19,0:19:41.91:0,42,345	0/0:26,0:27:64.93:0,65,521	0/0:24,0:26:63.98:0,64,504	0/0:16,0:16:38.90:0,39,315
chr10	87288241	.	GA	G	997.55	PASS	AB=0.790;AC=12;AF=0.214;AN=56;BaseQRankSum=6.084;DP=572;FS=1.463;HRun=14;HaplotypeScore=66.1244;InbreedingCoeff=0.5599;MQ=67.04;MQ0=0;MQRankSum=0.249;QD=7.07;ReadPosRankSum=3.912;VQSLOD=2.7107;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:26:39.47:0,39,504	1/1:2,6:8:14.86:103,15,0	0/0:25,0:13:22.27:0,22,158	0/0:16,0:11:6.39:0,6,65	0/0:16,0:16:31.16:0,31,286	0/0:22,0:25:58.15:0,58,519	0/0:16,0:16:42.05:0,42,390	0/0:29,2:31:9.40:0,9,319	0/0:20,2:23:9.71:0,10,355	1/1:10,14:25:18.13:240,18,0	1/1:6,11:17:11.33:202,11,0	0/0:16,0:16:38.94:0,39,343	0/0:17,0:18:46.58:0,47,413	0/1:17,4:22:28.29:28,0,305	0/0:18,0:22:44.87:0,45,398	0/0:15,1:16:18.26:0,18,286	1/1:5,20:26:54.32:360,54,0	0/1:4,13:17:8.62:205,0,9	0/0:23,0:27:27.35:0,27,322	0/0:22,3:26:18.61:0,19,412	0/1:7,1:8:5.57:6,0,96	0/0:16,0:16:36.89:0,37,323	0/1:14,2:18:23.29:23,0,236	0/0:14,0:19:32.86:0,33,288	0/0:22,0:22:21.45:0,21,323	0/0:22,0:24:43.91:0,44,407	0/0:24,1:27:42.02:0,42,478	0/0:19,0:20:32.83:0,33,279
chr10	87289293	.	TA	T	3619.76	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.433;DP=512;FS=6.081;HRun=3;HaplotypeScore=45.9816;InbreedingCoeff=0.9970;MQ=75.51;MQ0=0;MQRankSum=-1.041;QD=37.32;ReadPosRankSum=2.142;VQSLOD=3.9677;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.22:0,75,1029	1/1:0,8:8:21.07:293,21,0	0/0:14,0:13:39.10:0,39,492	0/0:8,0:8:23.81:0,24,265	0/0:26,0:26:78.17:0,78,1028	0/0:25,0:25:72.13:0,72,945	0/0:18,0:18:54.12:0,54,699	0/0:34,0:34:99:0,102,1375	0/0:17,0:17:51.17:0,51,719	1/1:1,29:30:88.81:1167,89,0	1/1:1,20:21:57.09:742,57,0	0/0:18,0:18:54.13:0,54,715	0/0:16,0:16:48.16:0,48,685	0/0:10,0:10:30.07:0,30,390	0/0:15,0:15:45.13:0,45,611	0/0:17,0:17:51.17:0,51,729	1/1:0,22:22:54.18:751,54,0	1/1:0,16:16:48.16:667,48,0	0/0:20,0:20:60.18:0,60,808	0/0:24,0:24:72.13:0,72,899	0/0:16,0:16:48.14:0,48,663	0/0:19,0:19:57.16:0,57,776	0/0:18,0:18:54.16:0,54,749	0/0:14,0:14:42.12:0,42,581	0/0:18,0:18:54.18:0,54,771	0/0:20,1:21:21.35:0,21,784	0/0:13,0:13:39.13:0,39,557	0/0:9,0:9:24.08:0,24,342
chr10	87289611	.	AAAT	A	4522.92	PASS	AB=0.917;AC=11;AF=0.196;AN=56;BaseQRankSum=13.051;DP=721;FS=4.206;HRun=0;HaplotypeScore=105.5727;InbreedingCoeff=0.8620;MQ=70.75;MQ0=0;MQRankSum=-4.755;QD=30.77;ReadPosRankSum=0.610;VQSLOD=5.2692;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,175,3919	1/1:0,6:6:14.65:255,15,0	0/0:20,0:20:6.05:0,6,989	0/0:25,0:25:29.82:0,30,1068	0/0:29,0:29:84.28:0,84,1802	0/0:28,0:28:84.29:0,84,1923	0/0:23,0:23:69.24:0,69,1568	0/0:39,0:39:99:0,114,2612	0/0:25,0:25:72.23:0,72,1613	1/1:1,18:19:54.17:893,54,0	1/1:0,30:30:73.74:1177,74,0	0/0:26,0:26:69.24:0,69,1589	0/0:18,0:18:54.15:0,54,1113	0/0:25,0:25:72.24:0,72,1594	0/0:28,0:28:75.23:0,75,1632	0/0:21,0:21:63.21:0,63,1410	1/1:0,26:26:66.23:1126,66,0	1/1:1,21:22:60.20:1007,60,0	0/0:28,0:28:84.27:0,84,1839	0/0:16,0:16:45.15:0,45,1019	0/0:36,0:36:99:0,102,2255	0/0:24,0:24:72.25:0,72,1646	0/0:23,0:23:69.22:0,69,1519	0/0:21,0:21:63.21:0,63,1361	0/0:23,0:23:63.22:0,63,1426	0/1:40,4:44:65.06:65,0,2536	0/0:23,0:22:69.23:0,69,1488	0/0:13,0:13:39.13:0,39,899
chr10	87290238	.	CACACAT	C	2069.70	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=4.881;DP=661;FS=1.248;HRun=0;HaplotypeScore=148.0001;InbreedingCoeff=0.3201;MQ=51.96;MQ0=25;MQRankSum=-2.853;QD=7.19;ReadPosRankSum=-5.976;VQSLOD=0.1729;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:49.54:384,50,0	1/1:3,10:12:15.05:295,15,0	0/0:31,0:7:5.16:0,5,73	0/0:43,0:7:4.82:0,5,40	0/0:24,0:23:50.92:0,51,963	0/0:23,0:23:60.13:0,60,1594	0/0:18,0:18:50.82:0,51,510	0/1:33,0:26:99:165,0,120	0/0:23,0:23:35.93:0,36,881	1/1:4,15:17:40.74:402,41,0	1/1:1,14:15:6.02:104,6,0	0/0:19,0:18:42.07:0,42,829	0/0:16,0:16:5.20:0,5,554	0/0:15,0:15:41.55:0,42,559	0/0:21,0:20:51.07:0,51,1079	0/0:21,0:21:54.06:0,54,910	1/1:26,0:25:44.70:387,45,0	0/1:16,0:16:5.55:294,0,6	0/1:19,0:17:12.86:13,0,157	0/1:24,0:24:24.43:24,0,397	0/1:25,0:24:4.09:4,0,584	0/0:29,0:28:71.72:0,72,1367	0/0:34,0:33:72.02:0,72,1484	0/0:28,0:28:66.09:0,66,1358	0/0:27,0:27:35.44:0,35,1551	0/1:31,0:31:80.47:80,0,560	0/1:31,0:30:68.51:69,0,637	0/1:7,0:7:30.87:31,0,34
chr10	87290244	.	TAC	T	2395.52	PASS	AB=0.979;AC=20;AF=0.357;AN=56;BaseQRankSum=3.297;DP=637;FS=0.000;HRun=0;HaplotypeScore=105.7567;InbreedingCoeff=0.6825;MQ=52.78;MQ0=25;MQRankSum=-0.576;QD=9.07;ReadPosRankSum=-0.620;VQSLOD=3.2222;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,10:26:36.51:408,37,0	1/1:12,0:11:11.50:47,11,0	0/0:24,0:7:17.63:0,18,205	0/0:37,0:10:14.11:0,14,190	0/0:22,0:21:18.84:0,19,426	0/0:23,0:23:51.12:0,51,738	0/0:19,0:19:33.08:0,33,450	1/1:27,2:23:34.82:366,35,0	0/0:23,0:23:54.03:0,54,773	0/1:17,0:15:1.42:8,0,1	1/1:14,0:14:2.80:13,3,0	0/0:18,0:17:29.97:0,30,430	0/0:15,1:16:9.14:0,9,362	0/0:14,0:14:4.54:0,5,369	0/0:19,1:19:14.62:0,15,677	0/0:20,0:20:45.15:0,45,695	0/1:27,0:26:8.50:27,0,9	0/0:17,0:16:12.43:0,12,104	1/1:19,0:17:14.71:167,15,0	0/1:20,1:22:28.10:162,0,28	1/1:24,2:25:24.80:336,25,0	0/0:29,0:28:60.04:0,60,858	0/0:33,0:32:58.67:0,59,764	0/0:28,0:28:66.09:0,66,969	0/0:28,0:28:54.19:0,54,849	1/1:32,0:32:6.47:527,6,0	1/1:27,4:31:23.38:435,23,0	0/1:7,0:7:1.56:96,0,2
chr10	87291391	.	A	ACC	2953.25	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.431;DP=662;FS=2.011;HRun=7;HaplotypeScore=91.8254;InbreedingCoeff=0.9956;MQ=81.60;MQ0=0;MQRankSum=-2.068;QD=29.24;ReadPosRankSum=0.832;VQSLOD=3.5977;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,105,1195	1/1:3,6:9:24.08:344,24,0	0/0:16,0:16:29.99:0,30,333	0/0:21,0:21:42.41:0,42,459	0/0:28,0:28:81.24:0,81,943	0/0:18,0:18:51.14:0,51,583	0/0:19,0:19:42.11:0,42,489	0/0:24,0:24:57.16:0,57,664	0/0:21,0:21:60.18:0,60,699	1/1:6,13:19:42.13:565,42,0	1/1:6,10:16:35.64:407,36,0	0/0:27,0:27:75.21:0,75,864	0/0:22,0:22:66.20:0,66,769	0/0:28,0:28:75.21:0,75,863	0/0:19,0:19:48.11:0,48,548	0/0:29,0:29:78.22:0,78,909	1/1:9,20:29:73.30:943,73,0	1/1:9,19:28:62.88:870,63,0	0/0:20,0:20:33.08:0,33,385	0/0:18,0:18:51.14:0,51,594	0/0:38,0:38:93.23:0,93,1073	0/0:26,0:26:75.20:0,75,860	0/0:26,0:26:57.13:0,57,663	0/0:27,0:27:72.18:0,72,816	0/0:28,0:28:78.23:0,78,908	0/0:30,0:30:72.19:0,72,838	0/0:26,0:26:75.22:0,75,874	0/0:6,0:6:15.04:0,15,175
chr10	87291399	.	AT	A	2787.85	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.613;DP=656;FS=3.688;HRun=1;HaplotypeScore=77.3772;InbreedingCoeff=0.9881;MQ=82.46;MQ0=0;MQRankSum=-3.309;QD=28.16;ReadPosRankSum=1.024;VQSLOD=3.5066;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,1981	1/1:2,7:9:24.06:271,24,0	0/0:15,0:15:11.66:0,12,444	0/0:23,0:23:62.64:0,63,781	0/0:29,0:29:84.27:0,84,1315	0/0:18,0:18:54.17:0,54,823	0/0:21,0:21:63.20:0,63,964	0/0:25,0:25:75.21:0,75,1088	0/0:22,0:22:66.22:0,66,1046	1/1:0,20:20:60.06:685,60,0	1/1:4,11:15:31.86:347,32,0	0/0:26,0:26:78.22:0,78,1169	0/0:23,0:23:69.22:0,69,1075	0/0:27,0:27:81.27:0,81,1276	0/0:20,0:20:60.18:0,60,897	0/0:30,0:30:90.26:0,90,1362	1/1:5,20:25:69.05:741,69,0	1/1:9,21:30:78.16:919,78,0	0/0:15,0:15:45.11:0,45,650	0/0:18,0:18:51.17:0,51,814	0/0:34,0:34:99:0,102,1556	0/0:25,0:25:75.24:0,75,1171	0/0:20,0:20:60.20:0,60,944	0/0:30,0:30:90.26:0,90,1370	0/0:30,0:30:90.26:0,90,1361	0/0:28,0:28:84.25:0,84,1261	0/0:30,0:30:90.28:0,90,1400	0/0:5,0:5:15.05:0,15,239
chr10	87292141	.	CT	C	1528.77	PASS	AB=0.925;AC=15;AF=0.268;AN=56;BaseQRankSum=-1.472;DP=504;FS=7.552;HRun=12;HaplotypeScore=88.9084;InbreedingCoeff=0.5846;MQ=66.21;MQ0=8;MQRankSum=0.858;QD=7.84;ReadPosRankSum=1.398;VQSLOD=2.5374;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,14:20:47.29:356,47,0	0/0:11,0:10:24.02:0,24,234	0/1:28,0:16:1.67:2,0,121	0/0:19,0:10:6.75:0,7,60	0/0:24,2:26:22.46:0,22,544	1/1:3,15:19:34.89:261,35,0	1/1:5,21:27:55.80:424,56,0	0/0:29,0:25:26.81:0,27,251	0/0:17,0:17:39.04:0,39,383	0/0:27,0:28:59.92:0,60,581	0/0:22,1:22:12.83:0,13,311	0/0:20,0:20:44.14:0,44,451	0/0:20,0:20:45.06:0,45,439	0/0:14,1:15:6.64:0,7,211	0/0:19,1:20:27.84:0,28,451	0/0:12,0:12:27.04:0,27,269	0/0:8,0:8:14.47:0,14,131	0/0:11,0:11:15.01:0,15,144	0/0:15,0:15:10.99:0,11,279	0/1:9,2:11:22.76:23,0,133	0/0:7,0:6:9.02:0,9,91	1/1:0,12:12:26.87:209,27,0	1/1:2,23:25:53.58:418,54,0	0/1:22,1:23:7.65:8,0,342	0/0:13,0:13:27.02:0,27,264	0/1:8,1:10:5.46:5,0,95	0/1:18,2:20:1.05:1,0,256	0/0:14,0:14:39.05:0,39,383
chr10	87292169	.	TG	T	2461.37	PASS	AB=0.902;AC=27;AF=0.482;AN=56;BaseQRankSum=8.475;DP=550;FS=5.405;HRun=1;HaplotypeScore=93.6692;InbreedingCoeff=0.8332;MQ=56.47;MQ0=17;MQRankSum=-6.227;QD=9.58;ReadPosRankSum=-3.611;VQSLOD=-0.0854;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:17.60:309,18,0	1/1:8,0:7:8.99:132,9,0	0/1:32,4:10:22.09:22,0,55	0/0:33,1:10:0.34:0,0,36	0/0:30,0:30:34.38:0,34,627	0/0:26,0:25:37.28:0,37,660	0/0:26,0:26:65.88:0,66,664	1/1:33,0:28:43.72:285,44,0	0/0:17,0:17:44.54:0,45,385	1/1:34,1:33:5.70:588,6,0	1/1:28,2:27:41.21:410,41,0	0/0:22,0:21:53.05:0,53,511	0/0:15,0:15:31.81:0,32,311	0/0:16,0:15:38.90:0,39,343	0/0:22,0:22:53.17:0,53,500	0/0:14,0:14:28:0,28,376	1/1:8,0:8:15.31:113,15,0	1/1:13,1:14:12.28:134,12,0	1/1:12,0:10:27.22:192,27,0	1/1:6,0:6:11.91:70,12,0	1/1:5,0:2:3.85:22,4,0	0/0:16,0:16:44.44:0,44,447	0/0:22,0:22:37:0,37,541	0/0:25,0:25:23.12:0,23,477	0/0:8,0:8:21.01:0,21,231	1/1:11,0:10:13.70:64,14,0	1/1:16,0:15:16.86:100,17,0	1/1:14,0:14:32.46:236,32,0
chr10	87292179	.	TTTG	T	1512.12	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=7.414;DP=527;FS=0.426;HRun=0;HaplotypeScore=104.2108;InbreedingCoeff=0.4645;MQ=55.48;MQ0=15;MQRankSum=-5.012;QD=7.68;ReadPosRankSum=-4.992;VQSLOD=1.1253;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,11:20:12.27:178,12,0	1/1:7,0:6:16.50:126,16,0	0/0:42,0:10:9.57:0,10,105	0/0:34,0:9:9.53:0,10,57	0/0:31,0:31:83.63:0,84,897	0/0:26,0:25:71.78:0,72,1068	0/0:23,0:23:59.88:0,60,789	0/1:31,0:25:3.73:133,0,4	0/0:15,0:15:38.75:0,39,524	1/1:32,0:30:46.41:550,46,0	1/1:28,0:25:35.90:348,36,0	0/0:23,0:22:17.71:0,18,567	0/0:13,0:13:35.57:0,36,426	0/0:19,0:18:50.68:0,51,642	0/0:22,0:22:50.60:0,51,718	0/0:14,0:14:41.91:0,42,575	1/1:6,0:6:10.36:61,10,0	1/1:13,0:13:3.61:80,4,0	0/1:10,0:8:4.95:68,0,5	0/1:7,0:7:18.72:19,0,58	0/1:5,0:2:9.24:14,0,9	0/0:15,0:15:34.83:0,35,546	0/0:22,0:22:45.33:0,45,598	0/0:22,0:22:50.30:0,50,626	0/0:9,0:9:15.22:0,15,169	0/1:12,0:11:28.39:28,0,62	0/1:14,0:13:4.24:4,0,105	0/1:12,0:12:21.67:89,0,22
chr10	87292181	.	TG	T	2357.80	PASS	AB=0.984;AC=29;AF=0.518;AN=56;BaseQRankSum=9.743;DP=512;FS=17.260;HRun=1;HaplotypeScore=83.6390;InbreedingCoeff=0.7109;MQ=55.76;MQ0=13;MQRankSum=-8.577;QD=8.86;ReadPosRankSum=-2.692;VQSLOD=-0.6421;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:25.82:166,26,0	1/1:7,0:6:16.18:124,16,0	0/1:39,2:10:15.76:16,0,62	0/0:33,1:9:0.56:0,1,26	0/0:30,0:30:7.21:0,7,387	0/0:27,0:26:39.61:0,40,620	0/0:24,0:24:44.40:0,44,479	1/1:30,0:24:39.26:253,39,0	0/0:15,0:15:15.82:0,16,238	1/1:29,1:28:74.95:611,75,0	1/1:22,3:22:57:439,57,0	0/1:24,0:23:11.09:11,0,273	0/1:13,0:13:8.51:9,0,135	0/0:19,0:18:31.90:0,32,382	0/0:20,0:20:25.03:0,25,418	0/0:15,0:15:20.71:0,21,325	1/1:6,0:6:11.43:74,11,0	1/1:9,1:10:20.77:167,21,0	1/1:10,0:8:21.68:153,22,0	1/1:6,0:6:10.91:56,11,0	1/1:4,0:2:4.21:23,4,0	0/0:15,0:15:34.75:0,35,329	0/0:21,0:21:40.83:0,41,371	0/0:19,0:19:26.49:0,26,336	0/0:7,0:7:9.14:0,9,103	1/1:11,0:10:20.74:102,21,0	1/1:13,0:12:16.79:80,17,0	1/1:16,0:16:42.24:286,42,0
chr10	87292435	.	A	AT	1413.09	PASS	AB=0.835;AC=11;AF=0.196;AN=56;BaseQRankSum=-7.315;DP=579;FS=1.024;HRun=12;HaplotypeScore=58.8077;InbreedingCoeff=0.7114;MQ=70.97;MQ0=0;MQRankSum=0.290;QD=10.79;ReadPosRankSum=-0.310;VQSLOD=2.8717;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:26:44.82:0,45,129	1/1:1,7:8:18.03:175,18,0	0/1:14,1:13:9.39:9,0,38	0/0:11,0:10:7.71:0,8,39	0/0:27,2:29:39.32:0,39,448	0/0:16,0:17:46.76:0,47,332	0/0:18,0:19:40.69:0,41,286	0/0:34,0:34:42.16:0,42,467	0/0:21,0:21:53.57:0,54,384	1/1:3,12:15:32.89:306,33,0	1/1:6,26:32:19.18:491,19,0	0/0:27,1:29:47.01:0,47,459	0/1:18,1:20:6.65:7,0,241	0/0:19,0:19:32.74:0,33,239	0/0:22,0:22:47.69:0,48,348	0/0:17,0:17:38.68:0,39,283	0/1:9,14:24:2.64:243,0,3	1/1:1,15:16:36.06:350,36,0	0/0:20,1:22:22.10:0,22,295	0/0:18,0:18:38.71:0,39,279	0/0:20,0:22:46.61:0,47,325	0/0:15,1:16:35.76:0,36,263	0/0:31,0:31:68.49:0,68,498	0/0:15,0:15:35.76:0,36,263	0/0:18,1:20:14.56:0,15,256	0/0:20,0:20:19.16:0,19,271	0/0:22,0:23:60.71:0,61,427	0/0:15,0:15:38.71:0,39,282
chr10	87293455	.	AT	A	827.39	PASS	AB=0.951;AC=6;AF=0.107;AN=56;BaseQRankSum=2.580;DP=638;FS=2.694;HRun=10;HaplotypeScore=77.0282;InbreedingCoeff=0.3112;MQ=71.22;MQ0=1;MQRankSum=-0.700;QD=7.88;ReadPosRankSum=1.372;VQSLOD=2.2735;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,36:45:99:912,105,0	0/0:7,0:7:15.04:0,15,166	0/1:10,0:9:3.84:4,0,101	0/1:13,0:12:14.94:15,0,50	0/0:26,0:26:72.16:0,72,783	0/0:19,1:20:28.06:0,28,517	0/0:30,0:30:72:0,72,760	0/0:21,2:23:19.06:0,19,429	0/0:22,0:22:60.15:0,60,656	0/0:19,0:19:45.12:0,45,492	0/1:16,2:18:10.50:10,0,315	0/0:19,0:19:45.59:0,46,499	0/0:20,0:20:60.15:0,60,656	0/0:25,1:26:43.19:0,43,688	0/0:19,0:19:51.10:0,51,550	0/0:13,0:13:36.09:0,36,390	0/0:38,0:38:99:0,102,1118	0/0:25,1:26:43.13:0,43,704	0/0:15,0:16:38.92:0,39,397	0/0:20,0:21:62.99:0,63,661	0/0:48,0:49:99:0,124,1273	0/0:30,0:30:75.17:0,75,812	0/1:17,2:19:3.08:3,0,404	0/0:24,1:25:37.12:0,37,638	0/0:10,0:10:30.06:0,30,316	0/0:24,0:24:66.17:0,66,720	0/0:38,0:38:99:0,111,1179	0/0:12,0:12:30.08:0,30,331
chr10	87293893	.	G	GA	1234.08	PASS	AB=0.933;AC=3;AF=0.054;AN=56;BaseQRankSum=-7.096;DP=563;FS=19.595;HRun=9;HaplotypeScore=57.8373;InbreedingCoeff=0.6090;MQ=77.36;MQ0=0;MQRankSum=0.174;QD=15.05;ReadPosRankSum=-1.161;VQSLOD=1.9066;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,49:54:99:1327,120,0	0/0:10,0:10:26.98:0,27,234	0/0:7,0:7:7.23:0,7,55	0/0:16,0:16:20.94:0,21,177	0/0:22,0:22:50.95:0,51,438	0/0:26,0:26:56.97:0,57,495	0/0:17,0:17:38.99:0,39,339	0/0:27,0:27:68.97:0,69,599	0/0:17,0:17:47.99:0,48,416	0/1:24,2:28:7.49:7,0,320	0/0:19,0:19:38.96:0,39,338	0/0:13,0:13:32.97:0,33,286	0/0:19,1:20:14.79:0,15,356	0/0:16,0:16:44.99:0,45,390	0/0:18,0:18:44.96:0,45,387	0/0:13,0:13:35.97:0,36,309	0/0:29,0:29:71.98:0,72,625	0/0:22,0:23:62.02:0,62,527	0/0:15,0:16:47.03:0,47,397	0/0:18,2:20:8.77:0,9,305	0/0:11,0:11:32.99:0,33,287	0/0:19,0:19:53.98:0,54,469	0/0:17,0:17:41.12:0,41,363	0/0:21,0:21:50.94:0,51,437	0/0:16,0:16:38.96:0,39,335	0/0:25,0:25:68.98:0,69,599	0/0:29,0:29:74.97:0,75,651	0/0:14,0:14:38.98:0,39,338
chr10	87294500	.	C	CACACAA	3704.48	PASS	AB=0.949;AC=13;AF=0.232;AN=56;BaseQRankSum=0.918;DP=562;FS=3.027;HRun=0;HaplotypeScore=154.0296;InbreedingCoeff=0.4549;MQ=58.71;MQ0=9;MQRankSum=-3.985;QD=23.01;ReadPosRankSum=-3.127;VQSLOD=2.8165;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:27:1.77:304,0,2	1/1:1,2:10:6:96,6,0	0/0:31,0:14:32.10:0,32,324	0/0:40,0:17:19.65:0,20,355	0/0:19,0:19:45.05:0,45,854	0/0:25,0:25:69.10:0,69,1142	0/0:15,0:15:42.03:0,42,628	0/1:19,0:19:23.52:24,0,227	0/0:18,0:19:54.09:0,54,1059	1/1:1,13:20:56.85:1113,57,0	1/1:14,3:20:47.94:686,48,0	0/0:38,0:38:99:0,105,1897	0/0:18,0:18:50.99:0,51,1053	0/0:12,0:12:33.04:0,33,656	0/0:15,0:15:42.06:0,42,723	0/0:17,0:17:48.13:0,48,1052	0/1:22,3:27:16.30:706,0,16	1/1:13,3:16:47.65:646,48,0	0/0:12,0:12:5.08:0,5,205	0/0:9,0:9:2.99:0,3,24	0/0:36,0:37:1.61:0,2,307	0/0:20,0:20:47.06:0,47,981	0/0:13,0:13:33.96:0,34,623	0/0:22,0:22:57.11:0,57,1117	0/0:20,0:20:53.96:0,54,909	0/1:15,0:15:80.34:80,0,163	0/0:16,0:17:13.28:0,13,172	0/1:2,0:2:18.94:49,0,19
chr10	87294683	.	G	GCA	4420.08	PASS	AB=0.552;AC=9;AF=0.161;AN=56;BaseQRankSum=-11.781;DP=805;FS=0.000;HRun=0;HaplotypeScore=105.3211;InbreedingCoeff=0.8606;MQ=63.33;MQ0=7;MQRankSum=2.118;QD=34.53;ReadPosRankSum=2.006;VQSLOD=7.1300;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:57.18:0,57,713	1/1:1,9:11:24.06:395,24,0	0/0:36,0:22:35.49:0,35,382	0/0:30,0:16:22.65:0,23,299	0/0:38,0:40:99:0,108,1327	0/0:24,0:25:75.07:0,75,914	0/0:25,0:25:59.93:0,60,750	0/0:45,0:45:99:0,102,1264	0/0:25,0:25:66.19:0,66,812	1/1:5,34:39:58.78:1499,59,0	0/1:6,26:32:71.88:1010,0,72	0/0:43,0:43:99:0,123,1499	0/0:24,0:24:45.14:0,45,563	0/0:21,0:21:54.17:0,54,675	0/0:21,0:21:42.13:0,42,525	0/0:32,0:32:87.25:0,87,1063	1/1:5,19:24:54.18:873,54,0	1/1:3,18:20:39.13:644,39,0	0/0:10,0:8:18.05:0,18,214	0/0:31,1:32:40.75:0,41,1027	0/0:44,0:44:96.31:0,96,1200	0/0:36,0:36:96.31:0,96,1201	0/0:24,0:24:63.20:0,63,788	0/0:29,0:29:66.21:0,66,825	0/0:21,0:21:50.95:0,51,636	0/0:29,2:31:14.73:0,15,869	0/0:42,0:41:99:0,108,1337	0/0:15,0:15:42.13:0,42,525
chr10	87295442	.	C	CA	1748.78	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-9.279;DP=810;FS=2.828;HRun=1;HaplotypeScore=77.8757;InbreedingCoeff=0.9702;MQ=82.00;MQ0=0;MQRankSum=-3.804;QD=38.86;ReadPosRankSum=0.416;VQSLOD=4.2357;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,44:45:99:1844,123,0	0/0:12,0:12:36.12:0,36,467	0/0:20,0:21:51.14:0,51,637	0/0:24,0:23:51.13:0,51,634	0/0:35,0:35:99:0,102,1310	0/0:22,0:22:66.20:0,66,842	0/0:56,0:56:99:0,165,2099	0/0:35,0:35:96.30:0,96,1235	0/0:26,0:26:75.24:0,75,974	0/0:27,0:27:81.25:0,81,1038	0/0:19,0:19:48.14:0,48,608	0/0:26,0:26:78.24:0,78,998	0/0:34,0:34:99:0,99,1271	0/0:20,0:20:60.18:0,60,764	0/0:31,0:31:90.28:0,90,1155	0/0:24,0:24:69.20:0,69,868	0/0:38,0:38:99:0,114,1479	0/0:36,0:36:99:0,105,1347	0/0:28,0:28:84.27:0,84,1090	0/0:21,0:21:63.20:0,63,817	0/0:60,0:60:99:0,171,2179	0/0:21,0:21:60.19:0,60,779	0/0:26,0:26:72.19:0,72,893	0/0:40,0:40:99:0,114,1478	0/0:27,0:27:78.25:0,78,1012	0/0:26,0:26:72.23:0,72,922	0/0:25,0:25:66.21:0,66,857	0/0:4,0:4:12.04:0,12,156
chr10	87295830	.	CTT	C	2882.24	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=0.381;DP=508;FS=15.067;HRun=11;HaplotypeScore=72.4492;InbreedingCoeff=0.9849;MQ=69.56;MQ0=9;MQRankSum=1.254;QD=18.84;ReadPosRankSum=0.715;VQSLOD=0.9538;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:31:69.07:0,69,658	0/0:2,0:8:9.71:0,10,33	0/0:13,0:11:21.03:0,21,256	0/0:16,0:12:17.71:0,18,151	0/0:21,0:21:47.75:0,48,700	0/0:20,0:19:48.12:0,48,656	0/0:14,0:14:33.07:0,33,481	1/1:6,18:24:51.09:542,51,0	0/0:12,0:12:21.07:0,21,312	0/0:3,0:22:37.87:0,38,145	0/0:5,0:13:22.97:0,23,115	0/0:14,0:14:33.11:0,33,498	0/0:17,0:17:45.15:0,45,683	0/0:8,0:8:24.07:0,24,331	0/0:14,0:15:26.06:0,26,339	0/0:8,0:8:18.06:0,18,276	0/0:9,0:29:59.55:0,60,219	0/0:7,0:21:29.94:0,30,103	1/1:10,14:24:42.07:447,42,0	1/1:3,18:20:45.02:464,45,0	1/1:4,19:23:39.08:415,39,0	0/0:17,0:17:48.12:0,48,691	0/0:18,0:18:47.64:0,48,679	0/0:13,0:13:35.56:0,36,471	0/0:17,0:16:42.13:0,42,626	1/1:3,17:20:51.12:543,51,0	1/1:7,15:22:32.83:351,33,0	1/1:3,16:19:30.07:319,30,0
chr10	87295928	.	AC	A	773	PASS	AB=0.891;AC=26;AF=0.481;AN=54;BaseQRankSum=-1.160;DP=332;FS=3.126;HRun=12;HaplotypeScore=37.8815;InbreedingCoeff=0.3315;MQ=57.94;MQ0=59;MQRankSum=0.406;QD=3.88;ReadPosRankSum=2.507;VQSLOD=-0.7210;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:10:2.92:0,3,17	1/1:4,0:4:2.96:20,3,0	0/0:8,1:8:5.11:0,5,93	0/0:11,0:5:2.99:0,3,25	0/0:11,0:8:2.88:0,3,15	1/1:5,4:7:8.94:68,9,0	1/1:10,9:18:22.59:166,23,0	1/1:14,1:10:14.80:107,15,0	1/1:7,2:8:5.93:46,6,0	0/1:6,1:6:16.75:17,0,17	1/1:4,0:9:8.62:25,9,0	0/0:18,0:11:5.97:0,6,50	0/1:6,0:3:0.89:1,0,15	0/0:12,0:10:14.93:0,15,127	0/0:9,0:9:6:0,6,55	0/0:8,0:6:5.96:0,6,50	0/1:22,4:23:6.57:136,0,7	1/1:15,5:16:1.06:143,1,0	1/1:7,1:5:5.97:46,6,0	0/0:7,1:8:0:0,0,0	1/1:7,6:11:5.02:29,5,0	./.	1/1:6,1:8:11.52:72,12,0	0/0:14,0:9:6:0,6,54	0/1:15,1:8:14.26:14,0,36	0/1:11,1:7:0:0,0,0	0/0:12,0:11:2.04:0,2,6	0/1:11,1:12:9.52:39,0,10
chr10	87298941	.	C	CAG	1940.35	PASS	AB=0.917;AC=11;AF=0.196;AN=56;BaseQRankSum=7.020;DP=931;FS=3.912;HRun=0;HaplotypeScore=198.5177;InbreedingCoeff=-0.2264;MQ=62.41;MQ0=14;MQRankSum=-6.256;QD=6.14;ReadPosRankSum=-5.567;VQSLOD=1.4274;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,11:51:63.08:0,63,795	0/1:9,0:9:31.59:32,0,248	0/0:55,0:30:6.79:0,7,304	0/0:109,0:43:3.10:0,3,326	0/0:40,0:40:63.14:0,63,801	0/0:30,0:30:69.21:0,69,899	0/0:27,0:27:69.21:0,69,888	0/1:56,2:58:99:454,0,1032	0/0:27,0:27:66.20:0,66,861	0/1:22,6:26:99:137,0,674	0/0:29,1:30:24.08:0,24,319	0/0:35,0:35:99:0,99,1297	0/0:27,0:27:69.17:0,69,893	0/0:24,0:24:48.11:0,48,602	0/0:25,0:25:51.14:0,51,661	0/0:31,0:31:84.25:0,84,1085	0/1:17,11:27:16.41:16,0,348	0/1:21,1:22:99:269,0,282	0/1:31,2:30:99:187,0,547	0/1:24,2:25:95.35:95,0,237	0/1:46,1:46:99:201,0,471	0/0:28,0:27:39.06:0,39,485	0/0:31,0:31:54.09:0,54,670	0/0:28,0:28:78.26:0,78,1035	0/0:14,0:14:33.08:0,33,415	0/1:37,4:41:99:405,0,749	0/1:15,3:18:99:218,0,160	0/1:6,0:6:6.97:74,0,7
chr10	87299340	.	G	GT	6807.06	PASS	AB=0.944;AC=25;AF=0.446;AN=56;BaseQRankSum=-12.508;DP=574;FS=2.885;HRun=9;HaplotypeScore=54.9200;InbreedingCoeff=0.8957;MQ=74.71;MQ0=0;MQRankSum=-0.632;QD=24.40;ReadPosRankSum=0.125;VQSLOD=5.6099;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:83.97:0,84,729	1/1:0,7:7:21.06:232,21,0	0/0:19,0:17:28.37:0,28,221	0/1:16,1:15:31.91:32,0,109	0/0:29,0:30:70.98:0,71,599	0/0:23,0:23:53.94:0,54,465	0/0:19,0:19:47.97:0,48,412	1/1:5,26:31:75.10:788,75,0	0/0:17,0:17:24.40:0,24,336	1/1:1,28:29:84.18:909,84,0	1/1:4,29:33:81.14:869,81,0	0/0:21,0:21:56.98:0,57,495	0/0:12,0:12:35.99:0,36,310	0/0:14,0:15:38.01:0,38,316	0/0:25,0:25:62.94:0,63,540	0/0:16,0:16:44.98:0,45,391	1/1:1,23:24:36.93:577,37,0	1/1:2,6:8:18.05:199,18,0	1/1:6,18:24:54.05:553,54,0	1/1:3,34:36:93.21:1008,93,0	1/1:3,5:8:17.98:184,18,0	0/0:16,0:16:44.97:0,45,387	0/0:27,0:27:65.97:0,66,573	0/0:8,0:8:20.99:0,21,182	0/0:17,0:17:41.98:0,42,365	1/1:5,16:21:2:460,2,0	1/1:3,20:22:42.11:465,42,0	1/1:0,17:17:48.13:531,48,0
chr10	87301465	.	CTCTCTCTG	C	3777.48	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.910;DP=702;FS=8.644;HRun=0;HaplotypeScore=222.2648;InbreedingCoeff=0.9213;MQ=66.10;MQ0=16;MQRankSum=-8.882;QD=48.43;ReadPosRankSum=-3.754;VQSLOD=1.7595;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:44.70:0,45,1405	1/1:1,6:7:17.73:369,18,0	0/0:44,0:25:36.94:0,37,962	0/0:86,0:51:41.34:0,41,1036	0/0:20,0:19:42.09:0,42,1297	0/0:29,0:27:61.24:0,61,2272	0/0:19,0:19:45.15:0,45,1679	0/0:39,0:38:24.79:0,25,1523	0/0:17,0:17:36.16:0,36,1484	1/1:9,21:30:90.29:2114,90,0	1/1:7,6:13:17.57:359,18,0	0/0:22,0:22:60.18:0,60,1920	0/0:18,0:18:51.16:0,51,1793	0/0:28,0:27:42.14:0,42,1409	0/0:29,0:29:72.25:0,72,2587	0/0:23,0:22:57.16:0,57,1632	1/1:10,3:13:22.39:371,22,0	1/1:8,7:15:30.06:565,30,0	0/0:22,0:22:41.10:0,41,907	0/0:17,0:17:25.73:0,26,542	0/0:29,0:28:60.55:0,61,1341	0/0:15,0:15:42.09:0,42,1405	0/0:18,0:18:42.14:0,42,1574	0/0:28,0:27:62.81:0,63,2330	0/0:19,0:19:48.15:0,48,1829	0/0:34,0:34:1:0,1,1655	0/0:26,0:26:43.44:0,43,1500	0/0:12,0:12:6.41:0,6,709
chr10	87301473	.	G	GTC	5462.66	PASS	AB=0.984;AC=20;AF=0.357;AN=56;BaseQRankSum=5.504;DP=716;FS=17.327;HRun=0;HaplotypeScore=158.1299;InbreedingCoeff=0.7159;MQ=62.37;MQ0=22;MQRankSum=-6.208;QD=22.30;ReadPosRankSum=-3.873;VQSLOD=3.3627;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:30.10:0,30,381	0/1:7,0:7:2.74:3,0,22	0/0:56,0:25:40.62:0,41,390	0/0:99,0:46:17.18:0,17,273	0/0:22,0:21:39.10:0,39,471	0/0:28,0:26:53.67:0,54,674	0/0:21,0:21:48.10:0,48,568	1/1:21,17:37:78.50:1211,79,0	0/0:20,0:20:42.13:0,42,586	0/1:29,0:29:80.89:81,0,161	0/1:13,0:13:2.20:2,0,14	0/0:25,0:25:58.04:0,58,672	0/0:20,0:20:47.62:0,48,551	0/0:24,0:22:32.99:0,33,412	0/0:27,0:27:57.16:0,57,711	0/0:24,0:23:39.11:0,39,476	1/1:12,0:12:3.39:67,3,0	0/1:14,1:15:13.79:79,0,14	1/1:11,8:19:47.99:619,48,0	1/1:6,10:16:20.86:300,21,0	1/1:16,12:27:41.65:639,42,0	0/0:14,0:14:39.09:0,39,466	0/0:18,0:18:42.02:0,42,528	0/0:27,0:26:61.73:0,62,720	0/0:20,0:20:45.12:0,45,572	1/1:16,17:33:80.94:1267,81,0	1/1:9,14:23:54.16:879,54,0	1/1:6,6:12:21:317,21,0
chr10	87301499	.	TTC	T	215.99	PASS	AB=0.916;AC=23;AF=0.426;AN=54;BaseQRankSum=4.672;DP=623;FS=9.730;HRun=0;HaplotypeScore=158.6435;InbreedingCoeff=0.1352;MQ=56.72;MQ0=35;MQRankSum=-4.576;QD=0.57;ReadPosRankSum=0.158;VQSLOD=2.2629;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:20:3.07:3,0,6	1/1:7,0:7:0.39:0,0,0	./.	0/1:94,0:28:0:0,0,0	0/0:15,0:15:15.04:0,15,195	0/0:19,0:19:8.81:0,9,74	0/0:28,0:28:34.67:0,35,291	0/1:26,0:23:1.16:1,0,1	0/0:17,0:17:24.08:0,24,338	1/1:25,0:25:8.95:31,9,0	1/1:10,0:10:0.90:2,1,0	0/0:28,0:29:44.32:0,44,580	0/0:15,0:15:23.73:0,24,279	0/1:15,12:26:19.72:126,0,20	0/1:26,1:27:56.50:57,0,357	0/1:12,2:13:14.99:15,0,205	0/0:10,0:11:1.62:0,2,16	0/1:12,0:12:4.81:12,0,5	0/1:13,0:13:0.80:1,0,4	0/0:15,0:15:2.69:0,3,13	1/1:15,0:14:0.77:3,1,0	0/0:12,0:12:6.02:0,6,89	0/0:21,0:21:14.99:0,15,134	0/1:25,2:26:5.51:6,0,303	0/1:16,0:16:39.26:39,0,132	1/1:21,0:21:2.38:43,2,0	0/1:16,0:16:3.98:4,0,16	1/1:8,0:7:2.04:6,2,0
chr10	87301518	.	T	TC	1304.59	PASS	AB=0.950;AC=14;AF=0.250;AN=56;BaseQRankSum=5.986;DP=517;FS=1.223;HRun=1;HaplotypeScore=127.9997;InbreedingCoeff=0.6469;MQ=44.94;MQ0=36;MQRankSum=-5.906;QD=10.78;ReadPosRankSum=-0.971;VQSLOD=1.3285;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:33.03:0,33,361	0/0:9,0:9:9.01:0,9,94	0/1:30,0:2:9.04:9,0,32	0/0:53,0:6:8.59:0,9,61	0/0:17,0:16:31.65:0,32,388	0/0:19,0:16:31.84:0,32,321	0/0:27,0:27:45.10:0,45,431	1/1:10,4:9:27.05:343,27,0	0/0:17,0:17:47.96:0,48,616	0/0:23,0:23:12.23:0,12,453	0/1:7,0:8:2.94:3,0,42	0/0:26,0:26:61.31:0,61,803	0/0:13,0:13:39.11:0,39,488	0/0:24,0:21:26.64:0,27,237	0/0:27,0:27:69.02:0,69,823	0/0:19,0:18:45.05:0,45,541	0/0:14,0:14:27.75:0,28,300	0/0:9,0:9:20.95:0,21,211	1/1:6,3:7:19.88:252,20,0	1/1:8,1:11:7.98:82,8,0	0/1:9,0:8:3.94:34,0,4	0/0:14,0:14:33.11:0,33,418	0/0:22,0:22:33.81:0,34,363	0/0:30,0:29:65.35:0,65,823	0/0:13,0:13:30:0,30,350	1/1:9,6:17:33.15:471,33,0	0/1:8,2:12:8.20:203,0,8	1/1:10,0:7:8.61:83,9,0
chr10	87301519	.	CT	C	1172.66	PASS	AB=0.881;AC=14;AF=0.250;AN=56;BaseQRankSum=5.720;DP=521;FS=0.000;HRun=1;HaplotypeScore=128.9898;InbreedingCoeff=0.5545;MQ=44.78;MQ0=36;MQRankSum=-5.849;QD=9.46;ReadPosRankSum=-1.346;VQSLOD=0.5655;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:32.04:0,32,348	0/0:9,0:9:11.06:0,11,99	0/1:31,0:2:9.04:9,0,32	0/0:52,0:6:9:0,9,85	0/0:15,0:14:33.10:0,33,450	0/0:20,0:17:36.11:0,36,454	0/0:28,0:28:63.16:0,63,778	1/1:12,6:12:29.06:347,29,0	0/0:17,0:17:47.97:0,48,686	0/0:23,1:24:16.54:0,17,460	0/1:9,0:9:2.45:2,0,55	0/0:26,0:26:67.44:0,67,977	0/0:13,0:13:39.12:0,39,558	0/0:26,0:23:21.77:0,22,190	0/0:27,0:27:69.84:0,70,916	0/0:19,0:18:44.16:0,44,574	0/0:13,0:13:27.96:0,28,313	0/0:9,0:9:19.24:0,19,219	1/1:6,3:7:19.88:241,20,0	1/1:5,5:10:3.81:71,4,0	0/1:7,3:10:16.38:31,0,16	0/0:14,0:14:36.12:0,36,475	0/0:22,0:22:39.11:0,39,475	0/0:30,0:29:67.98:0,68,918	0/0:13,0:13:28.99:0,29,364	1/1:10,4:17:9.33:414,9,0	0/1:9,4:14:39.17:209,0,39	1/1:4,0:2:3.35:16,3,0
chr10	87301523	.	CT	C	618.27	PASS	AB=0.846;AC=8;AF=0.143;AN=56;BaseQRankSum=7.409;DP=521;FS=15.076;HRun=1;HaplotypeScore=132.8713;InbreedingCoeff=-0.1845;MQ=45.20;MQ0=34;MQRankSum=-8.140;QD=5.15;ReadPosRankSum=2.103;VQSLOD=-0.7228;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:38.02:0,38,381	0/1:4,2:6:60.92:70,0,61	0/1:26,0:2:5.48:5,0,32	0/0:45,0:2:3.01:0,3,38	0/0:17,0:16:42.12:0,42,548	0/0:21,0:18:42.13:0,42,530	0/0:28,0:28:63.18:0,63,794	0/1:16,0:10:21.47:21,0,112	0/0:16,0:16:44.96:0,45,649	0/1:13,8:23:99:345,0,173	0/1:7,2:9:28.58:66,0,29	0/0:27,0:27:70.45:0,70,1022	0/0:13,0:13:39.13:0,39,571	0/0:26,0:23:24.78:0,25,228	0/0:27,0:27:69.83:0,70,910	0/0:18,0:17:41.15:0,41,536	0/1:8,4:12:98.85:151,0,99	0/1:6,2:9:80.94:81,0,133	0/0:12,0:9:2.25:0,2,62	0/0:14,0:15:12.22:0,12,68	0/0:13,0:12:6.68:0,7,49	0/0:13,0:13:33.11:0,33,438	0/0:23,0:23:45.11:0,45,536	0/0:31,0:30:70.99:0,71,958	0/0:13,0:13:28.99:0,29,364	0/1:18,0:19:8.85:9,0,96	0/0:13,0:15:17.21:0,17,173	0/0:6,0:3:8.61:0,9,80
chr10	87301532	.	TC	T	300.28	PASS	AB=0.825;AC=4;AF=0.071;AN=56;BaseQRankSum=5.671;DP=511;FS=5.522;HRun=1;HaplotypeScore=133.9614;InbreedingCoeff=-0.1097;MQ=45.30;MQ0=29;MQRankSum=-6.717;QD=4.69;ReadPosRankSum=-0.686;VQSLOD=0.0194;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:43.94:0,44,478	0/0:7,0:7:15.04:0,15,174	0/0:19,0:1:3.01:0,3,38	0/0:40,0:4:3.01:0,3,37	0/0:17,0:16:42.13:0,42,562	0/0:21,0:18:45.12:0,45,548	0/0:27,0:27:60.17:0,60,756	0/1:15,2:13:36.76:37,0,269	0/0:17,0:17:47.96:0,48,673	0/0:23,0:23:22.39:0,22,572	0/0:9,0:9:9.01:0,9,95	0/0:25,0:25:67.08:0,67,984	0/0:15,0:15:39.13:0,39,568	0/0:26,0:23:27.79:0,28,265	0/0:27,0:27:69.84:0,70,916	0/0:19,0:18:44.17:0,44,584	0/0:15,0:15:21.84:0,22,286	0/0:9,0:9:13.36:0,13,194	0/1:11,3:11:85.30:85,0,181	0/0:14,1:15:2.33:0,2,183	0/0:9,1:9:6.44:0,6,73	0/0:14,0:14:36.12:0,36,476	0/0:21,0:21:35.98:0,36,423	0/0:29,0:28:64.49:0,64,878	0/0:12,0:12:25.98:0,26,326	0/1:12,6:18:99:260,0,194	0/1:12,3:15:26.63:27,0,289	0/0:6,0:3:8.76:0,9,96
chr10	87301539	.	CCTCT	C	3733.43	PASS	AB=0.727;AC=22;AF=0.393;AN=56;BaseQRankSum=7.824;DP=509;FS=11.759;HRun=0;HaplotypeScore=141.2335;InbreedingCoeff=0.7742;MQ=49.29;MQ0=30;MQRankSum=-10.225;QD=24.40;ReadPosRankSum=-2.189;VQSLOD=2.4995;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:43.68:0,44,902	1/1:2,5:7:14.99:195,15,0	0/0:28,0:6:11.32:0,11,97	0/0:39,0:6:2.84:0,3,40	0/0:17,0:16:39.13:0,39,955	0/0:20,0:17:29.13:0,29,614	0/0:26,0:26:48.16:0,48,1137	1/1:7,9:12:27.09:452,27,0	0/0:16,0:16:42.13:0,42,921	1/1:9,9:18:42.13:677,42,0	1/1:5,3:9:1.87:50,2,0	0/0:24,0:24:54.15:0,54,1219	0/0:13,0:13:30.10:0,30,642	0/0:28,0:25:36.10:0,36,760	0/0:27,0:27:63.22:0,63,1485	0/0:19,0:18:41.81:0,42,857	0/1:9,6:17:15.74:206,0,16	0/1:5,4:10:9.81:255,0,10	1/1:7,7:11:24.08:407,24,0	1/1:5,10:16:20.99:295,21,0	1/1:3,6:9:7.44:89,7,0	0/0:14,0:14:33.11:0,33,797	0/0:16,0:17:21.07:0,21,440	0/0:31,0:30:68.49:0,68,1527	0/0:12,0:12:24.08:0,24,558	1/1:11,5:17:30.10:477,30,0	1/1:6,6:14:35.30:478,35,0	1/1:5,1:3:9.03:153,9,0
chr10	87301587	.	ACT	A	7055.60	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=13.686;DP=610;FS=3.484;HRun=0;HaplotypeScore=128.0288;InbreedingCoeff=0.9900;MQ=81.99;MQ0=0;MQRankSum=-5.067;QD=30.41;ReadPosRankSum=1.138;VQSLOD=6.3996;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.26:0,87,1421	1/1:2,8:10:24.08:315,24,0	0/0:41,0:30:57.90:0,58,757	0/0:57,0:37:17.62:0,18,462	0/0:18,0:18:51.17:0,51,863	0/0:23,0:23:66.22:0,66,1112	0/0:22,0:22:57.18:0,57,951	1/1:6,20:26:60.17:759,60,0	0/0:12,0:12:30.10:0,30,514	1/1:5,22:27:66.21:863,66,0	1/1:3,13:16:26.63:353,27,0	0/0:16,0:16:48.14:0,48,793	0/0:13,0:13:36.12:0,36,616	0/0:17,0:16:35.68:0,36,598	0/0:25,0:25:63.22:0,63,1071	0/0:18,0:18:51.17:0,51,874	1/1:1,23:24:54.17:709,54,0	1/1:1,18:19:45.15:591,45,0	1/1:3,18:21:54.03:670,54,0	1/1:2,21:23:60.20:788,60,0	1/1:2,13:15:33.11:433,33,0	0/0:13,0:13:39.13:0,39,669	0/0:16,0:16:45.15:0,45,772	0/0:38,0:38:96.33:0,96,1636	0/0:15,0:15:41.99:0,42,651	1/1:1,27:28:75.24:983,75,0	1/1:3,15:17:36.12:473,36,0	1/1:2,3:5:9.03:118,9,0
chr10	87302378	.	A	AAG	13948.73	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-14.921;DP=815;FS=0.000;HRun=0;HaplotypeScore=95.4476;InbreedingCoeff=1.0000;MQ=88.37;MQ0=5;MQRankSum=-4.956;QD=44.56;ReadPosRankSum=1.093;VQSLOD=6.3253;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,163,2267	1/1:1,13:15:36.11:603,36,0	0/0:27,0:27:69.19:0,69,899	0/0:36,0:36:89.97:0,90,1173	0/0:22,0:22:54.17:0,54,738	0/0:25,0:25:72.23:0,72,991	0/0:30,0:30:75.25:0,75,1050	1/1:3,28:32:87.27:1483,87,0	0/0:37,0:37:99:0,105,1451	1/1:2,29:31:90.31:1596,90,0	1/1:0,15:15:39.13:686,39,0	0/0:38,0:38:99:0,108,1503	0/0:25,0:25:63.19:0,63,862	0/0:25,0:25:72.24:0,72,1001	0/0:29,0:29:84.28:0,84,1176	0/0:33,0:33:90.28:0,90,1226	1/1:2,27:29:69.24:1225,69,0	1/1:4,21:25:63.22:1102,63,0	1/1:2,18:19:51.17:918,51,0	1/1:1,18:19:54.18:956,54,0	1/1:2,41:42:99:1837,102,0	0/0:26,0:26:75.24:0,75,1033	0/0:31,0:31:90.27:0,90,1222	0/0:37,0:37:99:0,99,1363	0/0:23,0:23:66.19:0,66,889	1/1:5,26:31:78.24:1341,78,0	1/1:2,35:35:81.28:1445,81,0	1/1:1,14:15:42.14:756,42,0
chr10	87302497	.	TGTGCACACACAA	T	5066.70	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.979;DP=928;FS=13.475;HRun=0;HaplotypeScore=323.3239;InbreedingCoeff=0.9839;MQ=60.25;MQ0=2;MQRankSum=-9.531;QD=44.06;ReadPosRankSum=-0.275;VQSLOD=2.9973;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,141,7342	1/1:1,12:13:12.04:432,12,0	0/0:33,0:20:48.08:0,48,1894	0/0:43,0:24:54.65:0,55,1639	0/0:30,0:30:81.27:0,81,4341	0/0:20,0:20:48.16:0,48,2503	0/0:44,0:44:99:0,108,4800	0/0:32,0:32:66.23:0,66,3260	0/0:47,0:47:99:0,135,7292	1/1:6,31:37:87.23:2857,87,0	1/1:7,23:30:16.41:542,16,0	0/0:55,0:55:99:0,147,7890	0/0:46,0:46:99:0,129,6629	0/0:31,0:31:90.25:0,90,4807	0/0:37,0:37:78.27:0,78,4313	0/0:33,0:33:90.30:0,90,4872	1/1:11,9:20:17.40:646,17,0	1/1:9,6:15:26.98:589,27,0	0/0:25,0:24:63.21:0,63,3340	0/0:22,0:22:60.21:0,60,3312	0/0:73,0:73:99:0,199,10498	0/0:26,0:26:65.47:0,65,3678	0/0:21,0:21:54.17:0,54,2578	0/0:35,0:35:78.24:0,78,4155	0/0:21,0:21:54.19:0,54,2765	0/0:40,0:40:99:0,102,5712	0/0:38,0:38:99:0,102,5379	0/0:6,0:6:15.05:0,15,829
chr10	87302508	.	AAG	A	772.70	PASS	AB=0.850;AC=8;AF=0.143;AN=56;BaseQRankSum=11.495;DP=931;FS=7.183;HRun=0;HaplotypeScore=162.9341;InbreedingCoeff=0.6884;MQ=60.95;MQ0=2;MQRankSum=-9.371;QD=7.58;ReadPosRankSum=0.687;VQSLOD=2.7213;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,160,3098	1/1:12,0:12:11.50:60,12,0	0/0:40,0:24:56.59:0,57,1105	0/0:44,0:25:56.56:0,57,896	0/0:31,0:31:90.30:0,90,1768	0/0:16,0:16:48.16:0,48,975	0/0:44,0:44:99:0,126,2429	0/0:27,0:27:81.28:0,81,1592	0/0:51,0:51:99:0,151,2959	1/1:32,0:32:41.06:490,41,0	1/1:24,0:24:14.84:76,15,0	0/0:54,0:54:99:0,163,3184	0/0:43,0:43:99:0,129,2485	0/0:38,0:38:99:0,114,2185	0/0:28,0:28:84.29:0,84,1706	0/0:34,0:34:99:0,102,2002	0/1:16,2:18:22.83:117,0,23	0/1:12,4:16:45.82:180,0,46	0/0:26,0:25:74.27:0,74,1409	0/0:20,0:20:60.21:0,60,1218	0/0:84,0:85:99:0,238,4650	0/0:30,0:30:86.19:0,86,1694	0/0:21,0:21:60.17:0,60,1119	0/0:32,0:32:87.27:0,87,1645	0/0:22,0:22:63.22:0,63,1240	0/0:41,0:41:99:0,120,2379	0/0:42,0:42:99:0,102,2059	0/0:5,0:5:15.05:0,15,305
chr10	87302593	.	T	TGCAC	6887.99	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=-1.425;DP=844;FS=1.044;HRun=0;HaplotypeScore=172.0544;InbreedingCoeff=0.8177;MQ=58.72;MQ0=19;MQRankSum=-2.731;QD=19.51;ReadPosRankSum=-2.318;VQSLOD=4.4645;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:47,0:47:99:210,0,445	1/1:7,3:9:17.99:362,18,0	0/0:52,0:15:35.09:0,35,390	0/0:46,0:27:54.51:0,55,639	0/0:30,0:29:17.52:0,18,186	0/0:20,0:20:52.93:0,53,804	0/0:35,0:35:81.98:0,82,1126	1/1:39,0:39:76.73:592,77,0	0/0:31,0:31:73.28:0,73,1132	1/1:22,8:30:80.47:1213,80,0	1/1:17,7:24:42.70:653,43,0	0/0:42,0:42:99:0,114,1768	0/0:29,0:29:72.19:0,72,1164	0/0:30,0:30:87.11:0,87,1254	0/0:36,0:36:99:0,99,1611	0/0:30,0:30:81.18:0,81,1273	1/1:14,9:24:29.36:1054,29,0	1/1:14,11:25:47.08:1236,47,0	1/1:25,0:22:56.82:438,57,0	0/1:19,0:19:12.97:53,0,13	1/1:56,0:56:52.84:521,53,0	0/0:26,0:26:62.55:0,63,798	0/0:17,0:17:35.24:0,35,506	0/0:44,0:44:99:0,123,1935	0/0:23,0:23:63.05:0,63,968	1/1:24,0:24:38.25:287,38,0	1/1:24,0:24:6.95:210,7,0	1/1:6,0:6:3.01:60,3,0
chr10	87302594	.	G	GCACGCACACACACA	6306.94	PASS	AB=0.909;AC=19;AF=0.339;AN=56;BaseQRankSum=-2.847;DP=873;FS=0.000;HRun=0;HaplotypeScore=327.8385;InbreedingCoeff=0.5566;MQ=58.44;MQ0=19;MQRankSum=-2.894;QD=19.11;ReadPosRankSum=-5.147;VQSLOD=2.1629;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:51:37.80:0,38,697	1/1:9,0:8:7.46:190,7,0	0/0:52,0:15:35.08:0,35,412	0/0:45,0:26:54.51:0,55,637	0/0:10,0:28:60.88:0,61,983	0/0:19,0:20:52.93:0,53,1501	0/0:29,0:34:84.97:0,85,2219	1/1:36,0:36:86.64:1442,87,0	0/0:27,0:30:81.16:0,81,2281	0/1:31,0:31:84.05:454,0,84	0/1:24,0:24:97.58:166,0,98	0/0:40,0:43:99:0,114,3440	0/0:26,0:30:72.03:0,72,2035	0/0:29,0:30:87.14:0,87,2287	0/0:31,0:36:99:0,99,3111	0/0:29,0:31:81.18:0,81,2462	0/1:24,0:24:99:160,0,139	0/1:25,0:25:99:177,0,150	1/1:25,0:23:60.51:834,61,0	0/1:4,15:25:13.21:201,0,13	1/1:61,0:61:74.79:886,75,0	0/0:24,0:27:62.66:0,63,1327	0/0:15,0:17:42.06:0,42,949	0/0:43,0:45:99:0,123,3722	0/0:23,0:23:63.14:0,63,1873	1/1:8,0:32:63.66:1055,64,0	1/1:4,16:29:12.46:632,12,0	1/1:0,0:7:3.01:111,3,0
chr10	87302596	.	A	ACG	4276.78	PASS	AB=0.992;AC=21;AF=0.375;AN=56;BaseQRankSum=4.907;DP=862;FS=0.663;HRun=0;HaplotypeScore=164.0909;InbreedingCoeff=0.5771;MQ=57.78;MQ0=19;MQRankSum=-3.381;QD=12.40;ReadPosRankSum=-0.435;VQSLOD=4.4733;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:28.30:0,28,463	1/1:10,0:9:7.98:154,8,0	0/0:52,0:15:38.08:0,38,410	0/0:44,0:25:54.51:0,55,607	0/1:29,0:28:99:217,0,111	0/0:21,0:21:55.89:0,56,696	0/0:35,0:35:87.93:0,88,1020	0/1:34,0:34:12.40:429,0,12	0/0:29,0:29:61.96:0,62,923	1/1:27,3:30:59.60:855,60,0	1/1:20,2:23:19.73:403,20,0	0/0:44,0:44:99:0,114,1479	0/0:32,0:32:75.15:0,75,991	0/0:31,0:31:87.12:0,87,1069	0/0:35,0:35:99:0,99,1314	0/0:30,0:30:84.15:0,84,1089	1/1:21,0:21:43.18:539,43,0	1/1:23,4:27:11.53:695,12,0	1/1:27,0:23:22.53:297,23,0	0/1:25,0:25:12.98:27,0,13	1/1:62,0:62:13.23:406,13,0	0/0:27,0:27:66.03:0,66,748	0/0:16,0:16:20.99:0,21,483	0/0:47,0:47:99:0,123,1621	0/0:22,0:22:63.97:0,64,794	0/1:26,0:26:26.73:124,0,27	0/1:23,1:24:24.86:97,0,25	1/1:7,0:7:3.01:34,3,0
chr10	87303331	.	CGTGTGTGT	C	678.12	PASS	AB=0.905;AC=13;AF=0.260;AN=50;BaseQRankSum=5.875;DP=600;FS=4.937;HRun=0;HaplotypeScore=148.6350;InbreedingCoeff=0.6985;MQ=68.39;MQ0=14;MQRankSum=-6.494;QD=4.91;ReadPosRankSum=-0.325;VQSLOD=2.1620;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:32:17.98:0,18,163	./.	./.	./.	0/0:13,0:13:9.03:0,9,295	0/0:15,0:15:3.01:0,3,98	1/1:18,5:23:5.79:66,6,0	0/0:32,0:32:15.46:0,15,147	0/0:22,0:21:27.09:0,27,850	1/1:11,0:15:9.03:167,9,0	1/1:14,0:22:6.66:113,7,0	0/0:16,0:17:18.04:0,18,533	0/0:22,0:22:24.07:0,24,626	0/0:17,0:20:24.08:0,24,685	0/0:19,0:25:27.05:0,27,373	0/0:18,0:17:30.10:0,30,964	1/1:15,0:17:6.02:112,6,0	0/1:17,0:19:68.82:103,0,69	0/0:12,0:14:18.01:0,18,283	0/0:10,0:14:15.02:0,15,269	0/0:37,0:39:24.05:0,24,407	1/1:12,7:19:6.01:105,6,0	1/1:16,7:23:12.38:171,12,0	0/0:23,0:26:21.07:0,21,753	0/0:19,0:20:24.08:0,24,691	0/0:21,0:21:3.96:0,4,276	0/0:15,0:17:21.07:0,21,386	0/0:11,0:14:10.85:0,11,226
chr10	87304361	.	A	AT	3580.79	PASS	AB=0.933;AC=11;AF=0.196;AN=56;BaseQRankSum=-10.865;DP=591;FS=7.889;HRun=2;HaplotypeScore=67.9056;InbreedingCoeff=0.9163;MQ=73.18;MQ0=0;MQRankSum=-0.105;QD=28.88;ReadPosRankSum=1.350;VQSLOD=2.5656;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.21:0,87,1013	1/1:0,4:4:9.03:129,9,0	0/0:15,0:15:22.72:0,23,287	0/0:13,0:13:31.69:0,32,351	0/0:17,0:17:51.02:0,51,561	0/0:17,0:17:51.14:0,51,618	0/0:28,0:28:78.15:0,78,888	0/0:34,0:34:98.97:0,99,1115	0/0:17,0:17:51.14:0,51,618	1/1:0,20:20:60.18:825,60,0	1/1:0,18:18:54.07:728,54,0	0/0:17,0:17:51.14:0,51,610	0/0:16,0:16:48.13:0,48,561	0/0:31,0:31:81.24:0,81,989	0/0:20,0:20:60.15:0,60,698	0/0:13,0:13:39.11:0,39,470	1/1:1,23:24:54.18:776,54,0	1/1:2,28:30:78.26:1121,78,0	0/0:21,0:21:63.17:0,63,744	0/0:23,0:23:66.19:0,66,795	0/0:20,0:20:54.10:0,54,608	0/0:26,0:26:75.21:0,75,904	0/0:26,0:26:69.96:0,70,899	0/0:21,0:21:54.15:0,54,643	0/0:21,0:21:57.18:0,57,705	0/1:26,2:28:1.69:2,0,849	0/0:22,0:22:66.15:0,66,759	0/0:20,0:20:60.19:0,60,742
chr10	87304494	.	G	GAA	3183.38	PASS	AB=0.705;AC=21;AF=0.375;AN=56;BaseQRankSum=1.477;DP=490;FS=1.311;HRun=12;HaplotypeScore=80.7291;InbreedingCoeff=0.7621;MQ=83.64;MQ0=0;MQRankSum=1.370;QD=14.28;ReadPosRankSum=-3.102;VQSLOD=2.0364;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:25:41.42:0,41,419	0/0:8,0:8:14.97:0,15,139	0/0:26,0:21:18.38:0,18,118	0/1:21,0:18:10.19:10,0,45	0/0:11,0:13:20.56:0,21,221	1/1:2,1:17:37.94:163,38,0	0/1:4,0:19:19.59:68,0,20	1/1:11,18:35:60.65:669,61,0	0/0:20,0:22:47.39:0,47,408	0/0:8,0:8:14.99:0,15,139	0/0:15,0:15:35.97:0,36,331	0/0:12,0:12:5.10:0,5,225	0/0:13,0:13:32.99:0,33,298	0/0:19,0:22:50.32:0,50,487	0/0:14,0:15:29.85:0,30,324	0/0:14,0:14:11.09:0,11,280	0/0:29,0:30:63.77:0,64,631	0/0:16,0:16:38.97:0,39,355	1/1:13,14:30:33.18:666,33,0	1/1:3,9:13:26.90:277,27,0	1/1:1,7:9:18.05:239,18,0	0/1:3,1:15:5.50:109,0,5	1/1:4,0:14:22.17:77,22,0	0/0:11,0:13:14.72:0,15,228	0/0:14,0:14:29.96:0,30,277	1/1:7,16:23:20.79:511,21,0	1/1:2,11:16:26.06:312,26,0	1/1:0,10:10:21.07:295,21,0
chr10	87304900	.	C	CAT	908.06	PASS	AB=0.915;AC=19;AF=0.339;AN=56;BaseQRankSum=10.201;DP=423;FS=46.582;HRun=0;HaplotypeScore=69.6461;InbreedingCoeff=-0.2631;MQ=34.35;MQ0=9;MQRankSum=-6.251;QD=3.07;ReadPosRankSum=3.101;VQSLOD=-0.3190;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:11.54:0,12,165	0/0:12,0:12:16.58:0,17,180	1/1:7,0:1:2.74:12,3,0	0/0:13,0:4:11.09:0,11,82	0/1:21,1:20:5.06:5,0,15	1/1:11,1:11:5.84:43,6,0	0/0:13,0:12:7.87:0,8,86	0/1:21,4:20:99:285,0,407	0/0:5,0:5:4.52:0,5,73	0/1:22,7:27:99:227,0,676	0/1:20,0:20:2.71:3,0,119	0/1:13,1:14:36.58:37,0,173	0/1:12,1:12:10.60:11,0,39	0/1:9,0:9:13.41:13,0,39	0/0:12,0:12:13.01:0,13,199	0/1:13,1:14:27.44:27,0,32	0/0:8,0:8:17.54:0,18,201	0/0:10,0:10:24.04:0,24,294	0/1:23,1:24:64.59:65,0,611	0/1:25,4:28:83.67:89,0,84	0/0:9,0:9:2.89:0,3,122	0/1:12,2:14:7.25:7,0,45	0/1:11,1:12:4.26:4,0,32	0/0:6,0:6:3.01:0,3,30	0/1:14,1:14:24.38:24,0,65	0/1:18,4:22:99:186,0,416	0/1:12,2:13:22.91:23,0,119	0/0:29,0:27:64.96:0,65,885
chr10	87307954	.	T	TC	4567.40	PASS	AB=0.573;AC=22;AF=0.393;AN=56;BaseQRankSum=-8.960;DP=613;FS=10.487;HRun=9;HaplotypeScore=66.1593;InbreedingCoeff=0.8433;MQ=84.55;MQ0=0;MQRankSum=-3.347;QD=18.34;ReadPosRankSum=0.448;VQSLOD=4.5247;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,105,892	0/1:3,8:11:7.98:143,0,8	0/0:22,0:23:15.23:0,15,335	0/0:24,0:23:45.85:0,46,346	0/0:24,0:24:62.93:0,63,536	0/0:22,0:22:56.96:0,57,492	0/0:24,0:24:53.97:0,54,468	1/1:8,8:16:17.98:173,18,0	0/0:17,0:17:50.96:0,51,436	1/1:5,17:22:45.09:485,45,0	0/1:4,13:17:19.24:231,0,19	0/0:19,0:19:47.97:0,48,416	0/0:14,0:14:41.96:0,42,357	0/0:13,0:13:38.99:0,39,339	0/0:24,0:24:65.94:0,66,563	0/0:20,0:20:56.97:0,57,491	1/1:2,23:25:57.15:631,57,0	1/1:2,24:26:60.16:664,60,0	1/1:13,5:18:12.01:122,12,0	1/1:5,12:16:8.06:305,8,0	1/1:10,14:24:33.08:357,33,0	0/0:29,0:29:77.84:0,78,649	0/0:20,0:20:50.98:0,51,443	0/0:26,0:26:62.95:0,63,542	0/0:21,0:22:55.99:0,56,471	1/1:8,20:29:45.07:467,45,0	1/1:2,23:25:31.07:559,31,0	1/1:2,17:19:39.11:431,39,0
chr10	87308677	.	CGTGTGTGTGT	C	1480.51	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=5.824;DP=527;FS=2.957;HRun=0;HaplotypeScore=150.3024;InbreedingCoeff=0.8270;MQ=64.54;MQ0=10;MQRankSum=-5.555;QD=25.97;ReadPosRankSum=-1.442;VQSLOD=2.7902;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:70.08:0,70,2641	0/0:2,0:2:0.84:0,1,2	./.	0/0:36,0:21:2.37:0,2,8	0/0:13,0:18:33.11:0,33,1165	1/1:7,6:13:12.04:358,12,0	1/1:8,5:14:18.06:518,18,0	0/0:14,0:14:24.08:0,24,845	0/0:12,0:12:15.05:0,15,646	0/0:18,0:18:36.12:0,36,1613	0/0:7,0:7:6.02:0,6,166	0/0:22,0:24:39.13:0,39,1481	0/0:13,0:14:24.08:0,24,935	0/0:12,0:14:23.90:0,24,753	0/0:9,0:8:12.04:0,12,465	0/0:13,0:15:33.11:0,33,1385	0/0:20,0:20:15.41:0,15,528	0/0:13,0:15:21.04:0,21,729	0/0:28,0:26:35.15:0,35,1461	0/0:18,0:18:5.68:0,6,156	0/0:29,0:28:15.04:0,15,368	1/1:4,8:13:15.05:346,15,0	1/1:7,9:17:21.07:409,21,0	0/0:15,0:25:33.10:0,33,1251	0/0:24,0:25:54.17:0,54,2371	0/0:31,0:30:41.93:0,42,1417	0/0:18,0:22:24.06:0,24,969	0/0:9,0:8:16.87:0,17,601
chr10	87310037	.	ACGACACAC	A	10636.67	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=16.159;DP=655;FS=11.441;HRun=0;HaplotypeScore=173.7874;InbreedingCoeff=0.9860;MQ=69.69;MQ0=2;MQRankSum=-14.115;QD=43.24;ReadPosRankSum=0.047;VQSLOD=3.9640;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,156,6204	1/1:3,13:16:36.12:954,36,0	0/0:34,0:31:66.23:0,66,2372	0/0:18,0:17:36.12:0,36,1360	0/0:32,0:32:87.30:0,87,3679	0/0:17,0:17:42.13:0,42,1694	0/0:29,0:29:81.28:0,81,3364	1/1:6,22:28:66.20:1523,66,0	0/0:28,0:28:78.27:0,78,3290	1/1:3,8:11:24.08:589,24,0	1/1:3,18:21:24.08:634,24,0	0/0:27,0:27:78.27:0,78,3108	0/0:18,0:18:51.18:0,51,1985	0/0:21,0:21:57.20:0,57,2394	0/0:21,0:21:60.19:0,60,2407	0/0:16,0:16:39.13:0,39,1573	1/1:6,20:25:33.11:885,33,0	1/1:3,17:19:27.09:725,27,0	1/1:5,9:14:27.08:541,27,0	1/1:2,22:24:33.11:879,33,0	1/1:7,13:20:6.89:154,7,0	0/0:18,0:18:45.15:0,45,1756	0/0:19,0:19:42.13:0,42,1470	0/0:42,0:42:99:0,105,4382	0/0:14,0:14:36.12:0,36,1542	1/1:5,22:27:69.19:1748,69,0	1/1:4,19:23:54.19:1442,54,0	1/1:4,12:16:21.07:563,21,0
chr10	87312253	.	A	AC	1806.65	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.588;DP=567;FS=0.505;HRun=8;HaplotypeScore=75.5410;InbreedingCoeff=0.9671;MQ=76.91;MQ0=0;MQRankSum=-0.251;QD=21.77;ReadPosRankSum=1.570;VQSLOD=4.0797;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,2:42:70.43:0,70,894	1/1:1,5:6:6.02:69,6,0	0/0:29,0:28:46.80:0,47,440	0/0:8,0:8:20.97:0,21,181	0/0:19,0:19:36:0,36,329	0/0:14,0:14:27.01:0,27,247	0/0:35,0:35:81:0,81,730	0/0:34,0:34:80.96:0,81,723	0/0:20,0:20:40.95:0,41,454	1/1:4,11:16:30.09:346,30,0	1/1:1,15:16:42.12:484,42,0	0/0:23,0:23:51.01:0,51,465	0/0:12,0:12:33.02:0,33,302	0/0:14,0:14:23.98:0,24,215	0/0:32,0:32:84.04:0,84,768	0/0:22,0:22:66.02:0,66,599	1/1:4,17:21:45.13:518,45,0	1/1:3,21:24:26.69:560,27,0	0/0:9,0:9:14.68:0,15,121	0/0:23,0:23:53.98:0,54,483	0/0:31,0:31:87:0,87,781	0/0:11,0:11:30.01:0,30,275	0/0:17,0:17:41.05:0,41,362	0/0:24,0:24:62.89:0,63,556	0/0:20,0:20:51.02:0,51,466	0/0:19,0:19:53.90:0,54,480	0/0:20,0:20:56.96:0,57,512	0/0:6,0:6:18.01:0,18,165
chr10	87314039	.	G	GTGAA	6063.62	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-13.102;DP=774;FS=1.367;HRun=0;HaplotypeScore=115.9861;InbreedingCoeff=0.9658;MQ=66.71;MQ0=1;MQRankSum=1.013;QD=44.26;ReadPosRankSum=2.629;VQSLOD=5.3383;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,99,1581	1/1:4,14:18:30.10:740,30,0	0/0:20,0:16:29.97:0,30,408	0/0:22,0:22:20.41:0,20,274	0/0:39,0:39:84.29:0,84,1381	0/0:29,0:29:63.20:0,63,1016	0/0:19,0:19:39.12:0,39,610	0/0:24,0:23:30.09:0,30,442	0/0:22,0:22:54.17:0,54,843	1/1:9,26:36:84.24:1853,84,0	1/1:4,19:25:56.83:958,57,0	0/0:38,0:38:99:0,99,1617	0/0:39,0:39:84.27:0,84,1357	0/0:22,0:22:51.15:0,51,779	0/0:34,0:34:84.24:0,84,1304	0/0:26,0:26:72.21:0,72,1136	1/1:7,21:30:63.22:1552,63,0	1/1:5,23:28:39.13:961,39,0	0/0:26,0:26:51.16:0,51,786	0/0:26,0:26:60.08:0,60,929	0/0:28,0:28:63.14:0,63,944	0/0:23,0:23:54.15:0,54,866	0/0:20,0:20:51.13:0,51,781	0/0:32,0:32:78.22:0,78,1224	0/0:21,0:21:51.17:0,51,831	0/0:31,1:32:4.22:0,4,1089	0/0:30,0:30:69.18:0,69,1063	0/0:26,0:26:69.18:0,69,1041
chr10	87315430	.	AT	A	1156.25	PASS	AB=0.763;AC=10;AF=0.179;AN=56;BaseQRankSum=5.705;DP=647;FS=9.086;HRun=12;HaplotypeScore=74.7032;InbreedingCoeff=0.5536;MQ=69.18;MQ0=0;MQRankSum=-2.313;QD=9.56;ReadPosRankSum=4.784;VQSLOD=2.3564;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:45:62.64:0,63,384	1/1:5,7:12:17.91:139,18,0	0/1:15,0:14:38.19:38,0,143	0/0:9,0:9:11.89:0,12,106	0/0:29,1:34:54.49:0,54,673	0/0:3,0:17:25.73:0,26,145	0/0:4,0:33:59.76:0,60,304	0/0:35,2:38:34.51:0,35,693	0/0:14,0:16:29.16:0,29,298	1/1:7,18:25:50.75:395,51,0	1/1:1,14:15:26.85:209,27,0	0/0:28,0:29:67.07:0,67,621	0/0:25,0:25:62.99:0,63,590	0/0:18,1:19:12.82:0,13,305	0/0:24,0:25:41.24:0,41,445	0/0:13,0:13:33.52:0,34,325	0/1:4,17:21:6.87:318,0,7	0/1:8,16:24:39.52:213,0,40	0/0:15,2:17:12.82:0,13,302	0/0:23,1:25:33.85:0,34,496	0/0:25,0:26:53.21:0,53,548	0/0:24,1:25:22.75:0,23,395	0/0:9,0:10:26.88:0,27,253	0/0:34,0:35:63.38:0,63,831	0/0:22,2:26:20.51:0,21,521	0/0:31,1:32:33.84:0,34,501	0/0:22,1:27:32.55:0,33,483	0/1:8,1:9:2.23:2,0,144
chr10	87315950	.	AAC	A	1771.23	PASS	AB=0.927;AC=18;AF=0.321;AN=56;BaseQRankSum=9.431;DP=694;FS=4.295;HRun=0;HaplotypeScore=97.5301;InbreedingCoeff=0.4089;MQ=70.45;MQ0=2;MQRankSum=1.883;QD=6.73;ReadPosRankSum=1.607;VQSLOD=3.1779;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:37:11.25:0,11,107	0/0:9,0:9:3:0,3,26	0/0:29,0:26:17.09:0,17,230	0/1:30,1:25:19.14:19,0,136	0/1:15,2:17:35.32:35,0,360	0/0:23,1:24:13.67:0,14,608	0/0:44,1:45:46.72:0,47,1106	0/1:22,9:31:31.86:230,0,32	0/0:31,0:32:23.05:0,23,741	0/0:23,0:23:38.84:0,39,385	0/0:17,0:18:2.67:0,3,26	0/0:26,3:29:23.01:0,23,788	0/0:16,1:17:1.86:0,2,442	0/1:15,0:15:7.08:7,0,342	0/0:33,0:33:66.99:0,67,1086	0/0:26,0:25:60.14:0,60,831	0/0:35,0:35:20.91:0,21,188	0/0:16,0:16:15.39:0,15,145	1/1:8,7:16:20.80:186,21,0	1/1:5,6:11:11.87:137,12,0	1/1:19,19:40:47.54:484,48,0	0/1:29,2:31:23.90:24,0,566	0/1:16,0:16:7.12:7,0,340	0/0:33,3:36:0.79:0,1,856	0/0:22,0:22:44.94:0,45,660	1/1:11,11:25:41.11:417,41,0	1/1:10,12:22:26.91:288,27,0	1/1:2,2:6:14.70:122,15,0
chr10	87319078	.	AC	A	11025.37	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=16.139;DP=628;FS=2.038;HRun=1;HaplotypeScore=60.1196;InbreedingCoeff=0.9995;MQ=81.81;MQ0=0;MQRankSum=-2.838;QD=39.80;ReadPosRankSum=0.959;VQSLOD=5.4667;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.24:0,69,1097	1/1:1,14:15:23.11:543,23,0	0/0:20,0:20:54.17:0,54,822	0/0:13,0:13:36.08:0,36,534	0/0:35,0:35:99:0,105,1677	0/0:18,0:18:54.17:0,54,829	0/0:23,0:23:69.24:0,69,1099	1/1:0,37:37:99:1476,108,0	0/0:27,0:27:81.26:0,81,1266	1/1:0,31:31:93.31:1301,93,0	1/1:0,24:24:68.91:905,69,0	0/0:16,0:16:48.15:0,48,744	0/0:17,0:17:51.17:0,51,813	0/0:17,0:17:51.15:0,51,769	0/0:26,0:25:78.24:0,78,1194	0/0:14,0:14:42.14:0,42,668	1/1:0,17:17:45.15:629,45,0	1/1:0,18:18:48.16:671,48,0	1/1:0,22:22:66.19:888,66,0	1/1:0,39:39:99:1592,117,0	1/1:0,11:11:33.11:461,33,0	0/0:22,0:22:66.21:0,66,1031	0/0:40,0:40:99:0,120,1797	0/0:13,0:13:39.11:0,39,593	0/0:27,0:27:81.26:0,81,1267	1/1:0,27:27:81.27:1133,81,0	1/1:0,24:24:72.24:1006,72,0	1/1:0,12:12:30.10:419,30,0
chr10	87319599	.	GGT	G	1130.60	PASS	AB=0.855;AC=30;AF=0.577;AN=52;BaseQRankSum=5.264;DP=544;FS=6.316;HRun=0;HaplotypeScore=86.6101;InbreedingCoeff=0.0590;MQ=53.07;MQ0=16;MQRankSum=-2.295;QD=2.87;ReadPosRankSum=0.621;VQSLOD=1.4706;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:33:16.91:84,17,0	1/1:2,0:8:8.83:40,9,0	./.	./.	0/1:10,2:12:68.80:69,0,117	0/0:16,0:17:5.75:0,6,40	0/0:17,0:17:4.55:0,5,30	1/1:23,0:24:2.79:13,3,0	0/1:10,1:11:34.82:35,0,57	0/1:8,0:15:13.24:38,0,13	1/1:9,0:13:5.68:28,6,0	0/0:18,0:17:27.02:0,27,349	0/1:11,1:10:17.69:18,0,163	0/1:21,2:23:43.47:43,0,324	0/1:16,2:18:8.66:9,0,289	0/1:20,1:22:5.98:6,0,279	1/1:15,0:25:14.16:69,14,0	1/1:11,0:17:8.52:42,9,0	1/1:18,1:17:3.01:33,3,0	1/1:15,4:19:4.43:200,4,0	0/1:36,10:47:48.33:113,0,48	0/0:16,0:15:9:0,9,92	0/0:11,0:11:0.47:0,0,1	0/1:22,2:29:62.16:62,0,145	0/0:17,0:17:23.93:0,24,336	1/1:13,2:17:14.86:135,15,0	1/1:7,5:13:14.87:145,15,0	0/1:9,3:13:12.36:112,0,12
chr10	87319640	.	G	GTGTGTA	253.54	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=1.984;DP=540;FS=4.921;HRun=0;HaplotypeScore=132.0604;InbreedingCoeff=0.5480;MQ=60.97;MQ0=23;MQRankSum=-2.535;QD=2.46;ReadPosRankSum=-2.223;VQSLOD=1.6222;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:68.66:0,69,694	0/0:8,0:8:13.81:0,14,156	0/0:33,0:16:28.37:0,28,345	0/0:27,0:13:38.96:0,39,369	0/0:18,0:18:45.46:0,45,562	1/1:4,13:20:5.92:190,6,0	1/1:1,14:16:5.86:130,6,0	0/0:19,0:16:35.78:0,36,335	0/0:17,0:16:35.95:0,36,390	0/0:18,0:18:25.07:0,25,385	0/0:12,0:12:29.90:0,30,288	0/1:19,0:19:8.92:9,0,437	0/0:19,0:19:53.89:0,54,603	0/0:19,0:19:48.06:0,48,788	0/0:15,0:15:39.06:0,39,650	0/0:14,0:14:41.86:0,42,638	0/0:22,0:21:13.82:0,14,416	0/0:14,0:14:29.86:0,30,311	0/0:16,0:16:43.73:0,44,404	0/0:33,0:32:57.68:0,58,724	0/0:28,0:28:41.01:0,41,432	1/1:5,0:15:2.59:11,3,0	0/0:1,5:5:0.45:0,0,1	0/1:31,0:30:37.27:37,0,449	0/0:15,0:15:39.05:0,39,568	0/0:20,0:20:50.63:0,51,494	0/0:13,0:13:33:0,33,407	0/0:15,0:14:10.54:0,11,312
chr10	87319843	.	T	TA	7168.89	PASS	AB=0.764;AC=32;AF=0.571;AN=56;BaseQRankSum=5.198;DP=526;FS=1.593;HRun=10;HaplotypeScore=68.8539;InbreedingCoeff=0.8590;MQ=75.26;MQ0=1;MQRankSum=-1.752;QD=21.53;ReadPosRankSum=-1.169;VQSLOD=5.3869;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:26:54.98:0,55,430	1/1:1,7:8:21.05:224,21,0	0/1:12,0:12:1.25:1,0,128	0/0:7,0:7:18.03:0,18,99	0/0:23,1:24:56.05:0,56,466	1/1:6,17:23:26.32:469,26,0	1/1:1,9:10:24.06:256,24,0	1/1:4,23:28:25.70:647,26,0	0/0:10,0:11:29:0,29,228	1/1:3,15:19:20.31:405,20,0	1/1:5,18:23:32.50:551,32,0	0/0:16,0:16:41.94:0,42,345	0/0:24,0:24:65.92:0,66,542	0/0:14,0:14:35.95:0,36,296	0/0:17,0:17:41.05:0,41,343	0/0:21,0:21:56.93:0,57,468	1/1:2,22:24:57.14:608,57,0	1/1:0,16:16:39.10:416,39,0	0/1:7,14:21:22.41:381,0,22	1/1:3,23:26:35.32:524,35,0	1/1:5,11:16:33.97:354,34,0	1/1:2,19:22:56.98:590,57,0	1/1:5,18:23:51.13:544,51,0	0/0:9,0:9:23.97:0,24,197	0/0:24,0:24:56.92:0,57,468	1/1:5,19:24:35.51:583,36,0	1/1:7,23:30:35.51:583,36,0	1/1:2,3:5:3.01:32,3,0
chr10	87320718	.	ATGGG	A	109.56	PASS	AC=6;AF=0.273;AN=22;BaseQRankSum=1.047;DP=112;FS=0.000;HRun=0;HaplotypeScore=20.0981;InbreedingCoeff=0.4751;MQ=80.14;MQ0=0;MQRankSum=0.786;QD=5.22;ReadPosRankSum=-0.698;VQSLOD=0.6260;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,3:10:6.02:100,6,0	./.	./.	0/0:10,0:6:6.01:0,6,101	0/0:4,0:4:6.02:0,6,146	0/0:4,0:4:5.98:0,6,94	./.	./.	./.	1/1:4,2:6:6.01:78,6,0	1/1:5,0:5:3:26,3,0	./.	./.	./.	./.	./.	./.	./.	./.	0/0:4,0:4:6.02:0,6,138	0/0:15,0:14:9.03:0,9,216	./.	0/0:4,0:4:6.02:0,6,143	./.	./.	0/0:1,0:1:3.01:0,3,73	./.	0/0:1,0:1:3.01:0,3,41
chr10	87320795	.	TAC	T	79.68	PASS	AB=0.733;AC=6;AF=0.300;AN=20;BaseQRankSum=2.357;DP=32;FS=5.180;HRun=0;HaplotypeScore=26.5024;InbreedingCoeff=-0.2638;MQ=73.38;MQ0=0;MQRankSum=-2.793;QD=3.19;ReadPosRankSum=0.960;VQSLOD=0.8227;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:6.02:0,6,120	./.	0/1:6,3:5:33.93:34,0,114	0/1:7,1:4:11.60:12,0,113	0/0:1,0:1:3:0,3,25	./.	./.	0/0:2,0:2:3:0,3,61	./.	0/0:1,0:1:3.01:0,3,61	./.	./.	./.	./.	./.	./.	0/1:1,1:2:40.32:40,0,55	0/0:1,0:1:3.01:0,3,61	./.	./.	0/1:2,3:4:39.33:39,0,112	./.	./.	1/1:0,1:1:3.01:43,3,0	./.	./.	./.	./.
chr10	87320844	.	ATGGG	A	289.50	PASS	AB=0.750;AC=7;AF=0.438;AN=16;BaseQRankSum=-2.177;DP=94;FS=0.000;HRun=0;HaplotypeScore=28.6546;MQ=32.80;MQ0=16;MQRankSum=2.475;QD=6.89;ReadPosRankSum=0.471;VQSLOD=1.2686;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:18,0:3:2.85:0,3,30	0/0:20,0:4:0:0,0,0	./.	0/0:1,0:1:2.92:0,3,17	./.	1/1:2,0:2:3:25,3,0	./.	./.	./.	./.	./.	./.	./.	./.	0/1:2,1:3:4.63:44,0,5	1/1:1,1:2:3.01:51,3,0	./.	./.	1/1:11,24:33:14.40:253,14,0	./.	./.	0/0:1,0:1:3.01:0,3,75	./.	./.	./.	./.
chr10	87321426	.	GGGTGGGTA	G	2619.10	PASS	AB=1.000;AC=21;AF=0.404;AN=52;BaseQRankSum=7.136;DP=266;FS=3.456;HRun=0;HaplotypeScore=79.3345;InbreedingCoeff=0.7482;MQ=51.46;MQ0=9;MQRankSum=-6.800;QD=30.45;ReadPosRankSum=-2.611;VQSLOD=2.8735;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:7:40.11:40,0,464	1/1:0,2:2:6.02:166,6,0	0/0:27,0:13:32.98:0,33,885	0/0:27,0:12:35.91:0,36,1107	0/0:9,0:9:18.06:0,18,617	0/0:14,0:14:38.48:0,38,1357	0/0:11,0:11:4.26:0,4,1088	1/1:4,9:12:23.87:406,24,0	0/0:13,0:13:36.12:0,36,1496	1/1:3,8:11:21.06:473,21,0	1/1:0,3:3:3.01:58,3,0	0/0:13,0:13:18.53:0,19,1235	0/0:11,0:11:30.10:0,30,1148	0/0:9,0:9:27.09:0,27,1085	0/0:8,0:8:21.07:0,21,833	0/0:8,0:8:24.08:0,24,1012	1/1:7,4:10:18.06:468,18,0	1/1:4,3:7:0.14:296,0,0	1/1:4,1:2:6.02:122,6,0	./.	1/1:12,2:12:9.03:163,9,0	0/0:8,0:8:21.06:0,21,608	0/0:1,0:1:3.01:0,3,75	0/0:14,0:14:42.14:0,42,1564	0/0:7,0:7:18.04:0,18,436	1/1:6,2:7:18.06:384,18,0	1/1:3,1:4:12.04:233,12,0	./.
chr10	87321501	.	TG	T	4669.26	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=12.872;DP=387;FS=0.000;HRun=6;HaplotypeScore=72.9073;InbreedingCoeff=0.8511;MQ=73.48;MQ0=0;MQRankSum=-4.631;QD=26.23;ReadPosRankSum=0.444;VQSLOD=4.9072;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:1:0:0,0,0	1/1:0,1:1:3.01:32,3,0	0/0:22,0:21:43.50:0,43,487	0/0:13,0:13:33.09:0,33,392	0/0:5,0:5:2.54:0,3,39	0/0:15,0:15:45.11:0,45,574	0/0:30,0:30:78.25:0,78,1026	1/1:1,12:13:30.06:315,30,0	0/0:11,0:11:30.09:0,30,380	1/1:0,11:11:33.05:338,33,0	1/1:0,5:5:9.02:97,9,0	0/0:15,0:15:45.13:0,45,564	0/0:18,0:18:54.16:0,54,696	0/0:13,0:13:39.10:0,39,483	0/0:17,0:17:48.16:0,48,631	0/0:16,0:16:48.14:0,48,617	1/1:2,20:21:57.14:611,57,0	1/1:1,18:19:42.10:452,42,0	1/1:1,13:13:36.06:375,36,0	1/1:0,7:7:9.02:96,9,0	1/1:2,57:59:99:1580,147,0	0/0:3,0:3:9.03:0,9,118	0/0:2,0:2:3.01:0,3,39	0/0:21,0:21:60.20:0,60,789	0/0:7,0:7:15.05:0,15,197	1/1:2,13:15:39.10:419,39,0	1/1:0,11:11:30.07:322,30,0	1/1:0,1:1:3.01:32,3,0
chr10	87322574	.	AACACAC	A	1690.50	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=3.414;DP=726;FS=0.000;HRun=0;HaplotypeScore=180.9090;InbreedingCoeff=0.5434;MQ=53.08;MQ0=22;MQRankSum=-5.570;QD=10.50;ReadPosRankSum=-0.720;VQSLOD=1.9487;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:34:22.31:0,22,308	0/0:15,0:16:8.76:0,9,63	0/0:41,0:16:9.02:0,9,136	0/0:54,0:21:24.02:0,24,385	0/0:19,0:18:21.05:0,21,580	1/1:8,12:20:24.88:504,25,0	1/1:13,6:18:7.11:443,7,0	0/0:34,0:27:34.83:0,35,349	0/0:18,0:20:33.10:0,33,918	0/0:30,0:31:56.61:0,57,625	0/0:15,0:16:11.21:0,11,196	0/0:30,0:30:51.18:0,51,1621	0/0:19,0:19:33.11:0,33,1080	0/0:32,0:31:60.12:0,60,1425	0/0:18,0:19:33.10:0,33,922	0/0:12,0:15:39.13:0,39,1105	0/0:18,0:18:12.36:0,12,167	0/0:12,0:14:9.88:0,10,210	0/1:20,0:12:49.40:90,0,49	0/0:17,0:17:6.78:0,7,64	0/0:50,0:52:32.81:0,33,487	1/1:21,8:28:12.01:480,12,0	1/1:15,3:17:14.87:191,15,0	0/0:44,0:46:84.24:0,84,2449	0/0:13,0:13:24.01:0,24,529	0/1:27,0:24:40.77:41,0,179	0/1:21,0:21:50.89:105,0,51	0/0:10,0:9:2.91:0,3,19
chr10	87322593	.	ACACACACACACTCACAC	A	2184.65	PASS	AB=0.954;AC=9;AF=0.161;AN=56;BaseQRankSum=2.398;DP=930;FS=23.018;HRun=0;HaplotypeScore=346.6869;InbreedingCoeff=-0.2087;MQ=40.57;MQ0=48;MQRankSum=-5.530;QD=6.68;ReadPosRankSum=0.729;VQSLOD=0.7649;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:40.39:0,40,808	0/0:16,0:16:15.05:0,15,298	0/0:54,0:4:3.01:0,3,36	0/0:77,0:21:25.45:0,25,769	0/0:18,0:18:26.73:0,27,849	0/0:17,0:16:29.88:0,30,811	0/0:30,0:29:10.63:0,11,1328	0/1:58,0:41:99:121,0,962	0/0:28,0:28:66.65:0,67,2489	0/0:54,0:47:36.36:0,36,1696	0/0:23,0:21:22.33:0,22,607	0/0:31,0:30:68.82:0,69,3180	0/0:17,0:17:35.42:0,35,1770	0/0:32,0:31:58.22:0,58,2605	0/0:25,0:25:4.08:0,4,2067	0/0:20,0:20:51.18:0,51,2512	0/1:30,0:25:22.35:22,0,595	0/0:21,0:20:1.25:0,1,900	0/1:26,1:11:98.05:510,0,98	0/1:23,0:20:99:166,0,185	0/1:92,0:88:51.69:52,0,1103	0/0:34,0:31:23.03:0,23,1109	0/1:16,0:13:1.90:2,0,321	0/0:51,0:51:99:0,111,5641	0/0:15,0:15:30.06:0,30,1227	0/1:29,13:35:99:732,0,555	0/1:10,2:12:19.13:613,0,19	0/1:7,0:6:62.79:101,0,63
chr10	87322644	.	CCA	C	816.80	PASS	AB=0.871;AC=7;AF=0.125;AN=56;BaseQRankSum=2.037;DP=988;FS=20.281;HRun=0;HaplotypeScore=223.6647;InbreedingCoeff=-0.0510;MQ=44.95;MQ0=65;MQRankSum=-4.326;QD=2.05;ReadPosRankSum=-0.918;VQSLOD=0.9535;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,3:27:20.08:0,20,460	0/0:23,0:23:45.14:0,45,644	0/0:34,0:9:5.38:0,5,67	0/1:55,1:13:0:0,0,0	0/0:15,0:15:30.06:0,30,487	0/0:19,0:19:36.11:0,36,552	0/0:35,0:35:15.37:0,15,896	0/1:41,3:30:99:101,0,541	0/0:30,0:32:69.96:0,70,1125	0/0:59,0:51:99:0,107,1610	0/0:18,0:17:30.09:0,30,441	0/0:30,0:30:60.68:0,61,975	0/0:13,0:13:30.22:0,30,413	0/0:32,0:30:65.68:0,66,1090	0/0:21,0:24:45.09:0,45,645	0/0:19,1:20:42.11:0,42,647	0/0:44,0:36:89.91:0,90,1194	0/0:36,0:34:66.42:0,66,885	0/1:23,3:14:52.53:53,0,319	0/1:11,6:15:98.21:165,0,98	0/1:134,38:131:99:276,0,1332	0/0:28,0:27:39.01:0,39,625	0/0:17,0:14:21.07:0,21,335	0/0:57,1:58:55.93:0,56,1830	0/0:17,0:17:34:0,34,524	0/1:42,7:36:99:235,0,439	0/1:21,5:24:99:109,0,187	0/0:4,0:4:6.49:0,6,87
chr10	87322663	.	CCA	C	7864.63	PASS	AB=0.722;AC=25;AF=0.446;AN=56;BaseQRankSum=5.759;DP=963;FS=12.268;HRun=0;HaplotypeScore=180.1773;InbreedingCoeff=0.8591;MQ=49.14;MQ0=47;MQRankSum=-4.835;QD=14.95;ReadPosRankSum=-0.313;VQSLOD=4.1057;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,8:25:27.75:286,28,0	1/1:9,12:21:41.95:496,42,0	0/0:51,0:12:12.82:0,13,150	0/0:62,0:9:10.72:0,11,178	0/0:14,0:14:42.13:0,42,658	0/0:14,0:14:33.11:0,33,537	0/0:35,1:35:31.02:0,31,1012	1/1:19,4:16:0.03:195,0,0	0/0:30,0:30:66.18:0,66,1034	1/1:13,44:49:99:1422,115,0	1/1:11,9:18:35.15:396,35,0	0/0:33,0:33:75.24:0,75,1199	0/0:12,0:12:19.19:0,19,425	0/0:35,0:33:61.01:0,61,1001	0/0:22,0:22:54.16:0,54,842	0/0:19,0:19:45.10:0,45,663	1/1:17,29:42:71.49:988,71,0	1/1:6,30:34:60.19:759,60,0	1/1:18,5:14:10.27:205,10,0	0/1:8,5:12:33.98:138,0,34	1/1:110,71:138:99:1972,130,0	0/0:21,0:20:29.64:0,30,495	0/0:15,0:14:15.05:0,15,236	0/0:56,1:56:88.23:0,88,1824	0/0:15,0:15:30.10:0,30,474	1/1:21,21:28:46.40:593,46,0	1/1:10,15:23:23.97:280,24,0	1/1:6,2:8:6.68:135,7,0
chr10	87322750	.	CCA	C	1005.73	PASS	AB=0.914;AC=15;AF=0.278;AN=54;BaseQRankSum=5.913;DP=1219;DS;FS=6.626;HRun=0;HaplotypeScore=192.6421;InbreedingCoeff=-0.2206;MQ=38.85;MQ0=105;MQRankSum=-5.080;QD=1.64;ReadPosRankSum=-3.171;VQSLOD=1.6080;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:26:1.81:0,2,409	0/1:12,0:11:35.50:36,0,159	./.	0/0:65,0:2:0.94:0,1,1	0/0:15,0:10:24.08:0,24,394	0/1:5,0:11:5.33:52,0,5	0/1:18,5:25:7.64:179,0,8	0/1:125,3:70:35.28:35,0,1048	0/0:18,0:17:35.79:0,36,576	0/1:89,4:75:99:143,0,1397	0/1:24,1:22:99:143,0,275	0/0:33,0:30:52.30:0,52,894	0/0:19,1:19:3.93:0,4,543	0/0:35,0:31:62.69:0,63,970	0/0:22,1:21:35.23:0,35,534	0/0:26,0:25:57.19:0,57,920	0/1:46,2:42:40.19:40,0,817	0/1:42,3:43:99:219,0,910	0/1:40,3:20:36.46:36,0,378	0/1:39,0:35:89.72:90,0,454	0/0:209,6:166:32.61:0,33,1930	1/1:21,0:18:2.76:20,3,0	0/0:16,0:12:0:0,0,0	0/0:48,0:44:84.60:0,85,1333	0/0:19,1:19:3.95:0,4,601	0/1:66,4:53:97.47:97,0,971	0/1:19,3:24:31.11:31,0,449	0/1:13,1:14:30.18:30,0,198
chr10	87322780	.	C	CCA	1552.37	PASS	AB=0.879;AC=12;AF=0.214;AN=56;BaseQRankSum=4.715;DP=944;DS;FS=2.404;HRun=0;HaplotypeScore=164.3778;InbreedingCoeff=0.2878;MQ=39.43;MQ0=81;MQRankSum=-5.347;QD=5.73;ReadPosRankSum=-1.267;VQSLOD=3.2033;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:3.01:0,3,34	1/1:7,5:13:21.40:324,21,0	0/0:65,0:2:6.02:0,6,66	0/0:80,0:4:11.05:0,11,69	0/0:11,0:10:21.07:0,21,266	0/0:17,0:15:27.90:0,28,317	0/0:30,0:25:52.37:0,52,623	0/0:55,0:28:42.28:0,42,499	0/0:19,0:19:55.06:0,55,678	0/1:46,6:43:66.99:274,0,67	1/1:13,3:15:9.73:119,10,0	0/0:33,0:30:71.96:0,72,896	0/0:26,0:25:50.28:0,50,616	0/0:34,0:29:66.03:0,66,801	0/0:14,0:12:30.09:0,30,375	0/0:20,0:20:51.16:0,51,639	0/1:31,3:30:50.31:472,0,50	0/1:28,4:34:90.45:369,0,90	1/1:32,1:13:7.77:98,8,0	0/0:19,0:15:12.70:0,13,150	0/0:134,0:102:78.47:0,78,1006	0/0:17,0:14:12.04:0,12,151	0/0:19,1:17:15.01:0,15,170	0/0:42,0:39:92.96:0,93,1142	0/0:17,0:16:30.10:0,30,378	0/1:45,0:42:30.10:30,0,410	0/1:21,0:21:8.50:9,0,65	0/1:7,0:8:18.59:19,0,30
chr10	87322816	.	C	CCA	940.13	PASS	AB=0.914;AC=10;AF=0.185;AN=54;BaseQRankSum=4.460;DP=949;DS;FS=25.151;HRun=0;HaplotypeScore=143.2464;InbreedingCoeff=-0.2296;MQ=37.26;MQ0=103;MQRankSum=-6.515;QD=2.19;ReadPosRankSum=-1.688;VQSLOD=0.8660;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:17.94:0,18,197	0/1:14,1:11:79.17:79,0,96	0/0:65,0:6:8.81:0,9,86	0/0:83,0:6:17.09:0,17,92	0/0:13,0:8:18.06:0,18,225	0/0:14,0:13:26.71:0,27,294	0/0:42,0:39:44.51:0,45,480	0/1:60,4:36:99:188,0,564	0/0:27,0:26:69.16:0,69,805	0/1:40,1:31:25.11:25,0,398	0/0:15,1:12:8.81:0,9,89	0/0:37,0:33:71.88:0,72,839	0/0:28,0:28:44.46:0,44,631	0/0:35,0:33:75.20:0,75,888	0/0:14,0:14:36.11:0,36,450	0/0:26,0:26:63.16:0,63,767	0/1:27,1:27:45.40:45,0,315	0/1:25,1:30:11.49:11,0,243	0/1:32,2:13:78.43:166,0,78	0/1:18,0:7:16.44:16,0,45	0/1:103,12:94:99:111,0,262	0/0:12,0:10:11.71:0,12,123	0/0:19,0:16:15.05:0,15,187	0/0:51,0:51:99:0,129,1595	0/0:8,0:6:9.03:0,9,112	0/1:25,9:27:99:254,0,212	0/1:6,5:12:13.55:185,0,14	./.
chr10	87323457	.	CAGAA	C	4965.94	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=14.758;DP=560;FS=4.421;HRun=0;HaplotypeScore=141.9769;InbreedingCoeff=0.9926;MQ=74.56;MQ0=4;MQRankSum=-14.220;QD=24.58;ReadPosRankSum=-1.199;VQSLOD=4.4988;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:56.27:0,56,1213	1/1:6,3:9:18.01:188,18,0	0/0:24,0:22:41:0,41,832	0/0:36,0:33:53.52:0,54,1132	0/0:32,0:32:81.25:0,81,1935	0/0:31,0:30:69.24:0,69,1679	0/0:13,0:13:33.10:0,33,737	1/1:11,14:25:58.03:701,58,0	0/0:20,0:20:57.18:0,57,1371	1/1:17,10:28:48.36:642,48,0	1/1:7,6:13:26.76:236,27,0	0/0:24,0:24:69.22:0,69,1668	0/0:15,0:15:45.14:0,45,1074	0/0:18,0:18:51.15:0,51,1264	0/0:18,0:18:54.18:0,54,1284	0/0:15,0:15:45.13:0,45,1061	1/1:12,11:23:47.33:538,47,0	1/1:8,4:13:20.82:251,21,0	1/1:14,3:16:27.76:303,28,0	1/1:5,8:13:30.02:333,30,0	1/1:7,5:12:18.91:182,19,0	0/0:27,0:26:75.19:0,75,1700	0/0:20,0:20:45.15:0,45,1094	0/0:21,0:21:57.18:0,57,1362	0/0:16,0:16:48.15:0,48,1111	1/1:3,13:16:42.10:558,42,0	1/1:11,18:28:71.62:862,72,0	1/1:0,4:4:12.04:171,12,0
chr10	87323469	.	CAGAA	C	5911.10	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=14.924;DP=585;FS=2.474;HRun=0;HaplotypeScore=151.0225;InbreedingCoeff=0.9956;MQ=67.63;MQ0=7;MQRankSum=-14.913;QD=30.01;ReadPosRankSum=-1.366;VQSLOD=4.5337;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:58.05:0,58,1069	1/1:3,3:6:17.99:193,18,0	0/0:42,0:30:56.82:0,57,1126	0/0:61,1:35:58.45:0,58,1056	0/0:25,0:25:75.21:0,75,1707	0/0:30,0:29:66.07:0,66,1426	0/0:13,0:12:32.90:0,33,719	1/1:12,14:26:68.95:850,69,0	0/0:18,0:18:54.17:0,54,1312	1/1:16,10:25:62.90:737,63,0	1/1:6,6:12:22.91:248,23,0	0/0:24,0:24:72.20:0,72,1720	0/0:14,0:14:42.13:0,42,1024	0/0:21,0:21:63.20:0,63,1457	0/0:18,0:18:48.15:0,48,1183	0/0:15,0:15:45.15:0,45,1065	1/1:9,12:21:35.80:585,36,0	1/1:8,4:11:16.94:260,17,0	1/1:9,4:13:32.24:390,32,0	1/1:6,8:14:36.04:444,36,0	1/1:6,5:11:27.07:315,27,0	0/0:26,0:24:66.17:0,66,1443	0/0:18,0:17:48.02:0,48,1062	0/0:20,0:20:60.09:0,60,1177	0/0:15,0:15:42.12:0,42,961	1/1:7,13:20:59.69:727,60,0	1/1:10,18:27:77.71:949,78,0	1/1:5,3:6:17.91:212,18,0
chr10	87323489	.	A	AAGAG	790.98	PASS	AB=0.923;AC=15;AF=0.268;AN=56;BaseQRankSum=6.855;DP=636;FS=20.710;HRun=0;HaplotypeScore=189.6875;InbreedingCoeff=0.1984;MQ=60.97;MQ0=19;MQRankSum=-5.739;QD=3.41;ReadPosRankSum=-3.981;VQSLOD=0.3008;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,11:23:15.84:86,0,16	0/1:5,0:5:32.10:65,0,32	0/0:61,0:29:58.78:0,59,832	0/0:92,0:31:34.38:0,34,582	0/0:20,0:20:54.18:0,54,833	0/0:25,0:23:5.95:0,6,306	0/1:20,0:20:85.69:86,0,144	0/1:34,0:33:18.37:27,0,18	0/0:15,0:15:42.14:0,42,687	1/1:15,5:19:16.21:204,16,0	0/1:12,2:18:25.75:29,0,26	0/0:19,0:19:51.12:0,51,814	0/0:13,0:13:39.11:0,39,603	0/0:16,0:16:48.16:0,48,790	0/0:16,0:16:42.14:0,42,691	0/0:13,0:13:39.11:0,39,597	1/1:19,1:21:9.72:185,10,0	1/1:9,2:11:11.46:178,11,0	0/1:12,0:12:11.22:11,0,51	0/0:16,0:16:8.38:0,8,70	0/1:10,0:10:0:0,0,0	0/1:27,0:25:16.74:17,0,425	0/1:28,0:27:68.84:69,0,348	0/0:23,0:23:57.19:0,57,975	0/0:17,0:17:36.10:0,36,577	0/0:21,0:21:10.31:0,10,65	0/0:29,0:28:36.65:0,37,285	0/0:7,0:6:8.99:0,9,76
chr10	87323491	.	GAGAC	G	1502.69	PASS	AB=0.988;AC=16;AF=0.296;AN=54;BaseQRankSum=10.018;DP=647;FS=1.923;HRun=0;HaplotypeScore=173.1694;InbreedingCoeff=0.2810;MQ=60.81;MQ0=19;MQRankSum=-9.199;QD=6.68;ReadPosRankSum=0.447;VQSLOD=2.9729;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:55.85:56,0,87	0/1:5,0:5:24.94:25,0,58	0/0:60,0:28:24.52:0,25,420	0/0:92,0:30:37.44:0,37,309	0/0:23,0:23:65.88:0,66,872	0/0:24,0:22:26.83:0,27,201	0/0:22,0:21:6.46:0,6,299	1/1:34,0:33:41.67:425,42,0	0/0:16,0:16:44.95:0,45,562	0/1:22,0:21:99:115,0,165	0/1:19,0:19:7.92:8,0,76	0/0:20,0:20:54.05:0,54,893	0/0:15,0:15:44.90:0,45,619	0/0:16,0:16:22.09:0,22,650	0/0:17,0:17:20.90:0,21,488	0/0:14,0:14:41.98:0,42,541	0/1:20,0:20:65.93:66,0,103	0/1:12,0:11:43.33:43,0,125	1/1:12,0:12:30.47:224,30,0	0/1:16,1:17:32.41:47,0,32	./.	0/0:27,0:25:32.69:0,33,256	0/0:27,0:25:29.12:0,29,264	0/0:22,0:22:60.07:0,60,1058	0/0:16,0:16:42.04:0,42,702	0/1:22,1:23:50.42:264,0,50	1/1:29,1:29:22.38:265,22,0	1/1:7,1:6:14.73:144,15,0
chr10	87323493	.	GAC	G	2982.06	PASS	AB=1.000;AC=18;AF=0.333;AN=54;BaseQRankSum=10.063;DP=654;FS=8.293;HRun=0;HaplotypeScore=150.4062;InbreedingCoeff=0.5292;MQ=60.66;MQ0=19;MQRankSum=-9.831;QD=13.08;ReadPosRankSum=-0.997;VQSLOD=2.5653;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:11.82:79,0,12	0/1:5,0:5:18.80:27,0,19	0/0:60,0:27:24.48:0,24,420	0/0:95,0:30:37.23:0,37,308	0/0:23,0:23:45.88:0,46,614	0/0:23,0:21:6.64:0,7,193	0/0:22,0:21:20.36:0,20,204	1/1:12,21:32:86.52:725,87,0	0/0:17,0:17:26.76:0,27,438	0/1:20,0:19:0.07:201,0,0	0/1:19,0:19:25.23:29,0,25	0/0:21,0:21:47.04:0,47,665	0/0:15,0:15:44.84:0,45,448	0/0:16,0:16:47.19:0,47,534	0/0:17,0:17:10.22:0,10,352	0/0:15,0:15:13.18:0,13,388	0/1:19,0:19:25.29:80,0,25	0/1:12,0:11:33.49:59,0,33	1/1:2,10:12:35.94:368,36,0	1/1:6,12:18:20.68:205,21,0	./.	0/0:26,0:24:32.32:0,32,252	0/0:26,0:24:20.27:0,20,208	0/0:23,0:23:32.77:0,33,701	0/0:16,0:16:41.86:0,42,532	1/1:25,1:26:37.22:480,37,0	1/1:19,13:31:74.11:778,74,0	1/1:7,1:6:17.78:142,18,0
chr10	87323495	.	C	CAGAGAGAGAG	2148.11	PASS	AB=1.000;AC=26;AF=0.481;AN=54;BaseQRankSum=-0.181;DP=665;FS=2.191;HRun=0;HaplotypeScore=242.8998;InbreedingCoeff=0.1547;MQ=61.15;MQ0=21;MQRankSum=-3.220;QD=5.02;ReadPosRankSum=-6.842;VQSLOD=0.9384;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:28.23:32,0,28	0/1:5,0:5:62.92:63,0,70	0/1:61,0:26:0:0,0,0	0/0:96,0:31:1.30:0,1,6	0/0:25,0:25:16.73:0,17,292	1/1:18,6:28:12.04:424,12,0	1/1:21,0:20:18.95:535,19,0	1/1:33,0:32:16.55:98,17,0	0/1:16,0:16:6.15:6,0,277	1/1:19,0:18:25.63:274,26,0	0/1:17,0:17:59.80:60,0,60	0/0:22,0:23:20.03:0,20,646	0/0:16,0:16:15.01:0,15,313	0/0:15,0:16:18.06:0,18,490	0/1:14,0:16:6.90:7,0,361	0/0:15,0:16:3.77:0,4,268	0/1:18,0:18:3.22:219,0,3	1/1:12,0:10:11.59:123,12,0	0/1:12,0:12:9.14:9,0,134	0/1:20,0:20:6.79:7,0,166	./.	1/1:26,0:24:2.90:85,3,0	1/1:26,0:24:9.03:205,9,0	0/0:23,0:26:39.04:0,39,964	0/1:17,0:17:0.89:1,0,472	0/1:24,0:24:99:125,0,104	0/1:31,0:30:45.13:45,0,587	0/0:8,0:6:9.03:0,9,158
chr10	87324152	.	TTCCACTCCTTC	T	7643.80	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=12.864;DP=679;FS=11.237;HRun=0;HaplotypeScore=218.5192;InbreedingCoeff=0.9998;MQ=79.28;MQ0=0;MQRankSum=-13.205;QD=80.46;ReadPosRankSum=1.406;VQSLOD=3.7722;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,7483	0/0:10,0:10:30.10:0,30,1513	0/0:23,0:23:69.10:0,69,2867	0/0:12,0:14:40.95:0,41,1857	0/0:19,0:19:54.19:0,54,2891	1/1:0,28:28:63.22:2338,63,0	1/1:0,30:30:57.20:2116,57,0	0/0:38,0:38:99:0,114,5669	0/0:21,0:21:63.22:0,63,3471	0/0:25,0:25:75.26:0,75,3969	0/0:16,0:16:48.16:0,48,2576	0/0:19,0:19:57.20:0,57,2961	0/0:24,0:24:72.22:0,72,3576	0/0:29,0:29:87.30:0,87,4742	0/0:21,0:21:63.22:0,63,3600	0/0:21,0:21:63.22:0,63,3340	0/0:24,0:24:72.25:0,72,3640	0/0:15,0:15:45.15:0,45,2633	0/0:18,0:18:54.19:0,54,2549	0/0:33,0:33:99:0,99,5094	0/0:45,0:45:99:0,135,6451	1/1:0,18:18:48.10:1634,48,0	1/1:0,19:19:42.14:1555,42,0	0/0:30,0:30:90.29:0,90,4363	0/0:26,0:26:78.26:0,78,4143	0/0:28,0:28:84.29:0,84,4675	0/0:35,0:35:99:0,105,5860	./.
chr10	87325327	.	TCC	T	829.81	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.954;DP=494;FS=9.561;HRun=9;HaplotypeScore=103.8226;InbreedingCoeff=0.9458;MQ=71.47;MQ0=1;MQRankSum=-3.772;QD=28.61;ReadPosRankSum=-1.384;VQSLOD=2.5709;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,21:29:81.22:925,81,0	0/0:7,0:7:15.03:0,15,210	0/0:24,0:18:42.88:0,43,514	0/0:22,0:16:26.70:0,27,330	0/0:25,0:25:69.17:0,69,1055	0/0:7,0:11:18.02:0,18,177	0/0:12,0:18:39.03:0,39,390	0/0:26,0:26:71.05:0,71,529	0/0:18,0:18:51.15:0,51,808	0/0:13,0:13:36.10:0,36,544	0/0:21,0:21:54.15:0,54,793	0/0:23,0:23:66.16:0,66,996	0/0:13,0:13:30.06:0,30,462	0/0:10,0:10:30.09:0,30,466	0/0:14,0:14:42.14:0,42,670	0/0:15,0:15:42.12:0,42,637	0/0:27,0:27:75.26:0,75,1224	0/0:30,0:30:84.19:0,84,1291	0/0:21,0:21:44.75:0,45,343	0/0:20,0:20:50.79:0,51,392	0/0:8,0:8:17.89:0,18,141	0/0:10,0:11:24:0,24,233	0/0:5,0:5:15.01:0,15,137	0/0:14,0:14:36.11:0,36,559	0/0:12,0:12:33.10:0,33,511	0/0:20,0:20:56.79:0,57,447	0/0:28,0:28:71.77:0,72,565	0/0:7,0:7:20.92:0,21,164
chr10	87325331	.	C	CA	4785.53	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=8.652;DP=489;FS=25.059;HRun=0;HaplotypeScore=81.0258;InbreedingCoeff=0.8783;MQ=68.76;MQ0=1;MQRankSum=-1.881;QD=34.18;ReadPosRankSum=-1.758;VQSLOD=2.8770;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.57:0,85,500	0/0:6,0:6:15.05:0,15,208	0/0:25,0:18:48.08:0,48,582	0/0:19,0:12:1.49:0,1,253	0/0:25,0:25:68.02:0,68,939	0/0:12,0:12:20.83:0,21,155	0/0:17,0:17:24.33:0,24,226	1/1:8,20:28:77.79:1006,78,0	0/0:19,0:19:57.14:0,57,758	0/0:14,0:14:36.09:0,36,483	0/0:21,0:21:57.11:0,57,727	0/0:22,0:22:66.17:0,66,881	0/0:11,0:11:33.05:0,33,421	0/0:10,0:10:30.09:0,30,403	0/0:14,0:14:42.14:0,42,585	0/0:15,0:15:45.12:0,45,581	0/0:27,0:27:78.21:0,78,1050	0/0:30,0:30:90.25:0,90,1198	1/1:5,15:20:54.15:718,54,0	1/1:4,14:18:51.13:695,51,0	1/1:4,4:8:18.05:237,18,0	0/1:11,0:11:8:20,0,8	0/0:7,0:7:14.92:0,15,120	0/0:13,0:13:39.09:0,39,522	0/0:12,0:12:36.07:0,36,465	1/1:6,15:21:60.03:759,60,0	1/1:2,24:27:78.23:1053,78,0	1/1:0,7:7:21.07:299,21,0
chr10	87325355	.	AT	A	3521.18	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=11.139;DP=421;FS=6.538;HRun=9;HaplotypeScore=64.7274;InbreedingCoeff=0.9283;MQ=71.06;MQ0=0;MQRankSum=-4.313;QD=19.56;ReadPosRankSum=-1.434;VQSLOD=3.6159;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:29:59.96:541,60,0	0/0:4,0:4:12.04:0,12,138	0/1:11,0:11:4.07:4,0,143	0/0:16,0:14:26.70:0,27,245	0/0:19,0:19:57.17:0,57,657	1/1:3,9:12:24.01:220,24,0	1/1:3,5:8:15:135,15,0	1/1:3,19:22:60.02:545,60,0	0/0:21,0:21:54.13:0,54,595	0/0:15,0:15:45.13:0,45,519	0/0:24,0:24:60.17:0,60,682	0/0:16,0:16:45.12:0,45,509	0/0:11,0:11:33.09:0,33,370	0/0:9,0:9:24.03:0,24,260	0/0:13,0:13:39.12:0,39,450	0/0:14,0:14:39.12:0,39,450	0/0:27,0:27:60.18:0,60,692	0/0:22,2:24:17.28:0,17,707	1/1:5,16:21:47.99:430,48,0	1/1:0,12:12:36.02:329,36,0	1/1:1,5:6:9:82,9,0	1/1:0,8:8:24.01:219,24,0	1/1:1,9:10:27.01:247,27,0	0/0:15,0:15:45.13:0,45,519	0/0:13,0:13:26.21:0,26,310	1/1:8,10:18:33.01:302,33,0	1/1:6,12:18:36.01:329,36,0	1/1:0,5:5:15.01:137,15,0
chr10	87325632	.	C	CT	1289.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.912;DP=517;FS=2.969;HRun=8;HaplotypeScore=53.4759;InbreedingCoeff=0.9319;MQ=60.95;MQ0=16;MQRankSum=-1.878;QD=29.31;ReadPosRankSum=0.815;VQSLOD=3.9113;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,43:43:99:1384,120,0	0/0:8,0:7:21.01:0,21,192	0/0:13,0:5:11.60:0,12,90	0/0:11,0:6:14.91:0,15,119	0/0:19,0:19:57.03:0,57,522	0/0:18,0:17:45.01:0,45,407	0/0:23,0:23:59.98:0,60,538	0/0:20,0:19:42.01:0,42,380	0/0:13,0:11:30.02:0,30,275	0/0:31,0:31:84.03:0,84,766	0/0:23,0:23:66.04:0,66,604	0/0:15,0:14:39.02:0,39,357	0/0:13,0:13:39.02:0,39,357	0/0:17,0:17:41.99:0,42,379	0/0:12,0:11:30.01:0,30,275	0/0:17,0:13:33.01:0,33,302	0/0:27,0:27:75.04:0,75,686	0/0:7,0:7:18.01:0,18,165	0/0:19,0:17:39.01:0,39,357	0/0:18,0:17:45.01:0,45,412	0/0:21,0:21:58.10:0,58,506	0/0:7,0:7:18.01:0,18,165	0/0:23,0:21:38.48:0,38,524	0/0:25,0:23:69.04:0,69,632	0/0:19,0:19:54.02:0,54,494	0/0:23,0:22:54.02:0,54,494	0/0:19,0:17:48.02:0,48,439	0/0:10,0:9:27.01:0,27,247
chr10	87326134	.	AC	A	419.81	PASS	AB=0.917;AC=11;AF=0.204;AN=54;BaseQRankSum=0.354;DP=128;FS=16.832;HRun=7;HaplotypeScore=20.9383;InbreedingCoeff=0.5202;MQ=76.78;MQ0=0;MQRankSum=-0.946;QD=12.35;ReadPosRankSum=-0.688;VQSLOD=0.5874;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:24.08:0,24,298	1/1:0,3:3:3.01:31,3,0	0/0:2,0:2:5.98:0,6,58	0/1:10,1:10:49:49,0,115	0/0:4,0:4:9.03:0,9,113	0/0:4,0:4:9.03:0,9,113	0/0:10,0:10:21.05:0,21,251	./.	0/0:4,0:4:12.01:0,12,124	1/1:0,1:1:3.01:31,3,0	1/1:0,3:3:6.01:61,6,0	0/0:4,0:4:9.03:0,9,113	0/0:1,0:1:3.01:0,3,38	0/0:5,0:5:15.04:0,15,176	0/0:2,0:2:6.02:0,6,75	0/0:3,0:3:5.98:0,6,58	1/1:1,8:9:21.04:214,21,0	1/1:1,6:7:18.04:183,18,0	0/0:4,0:4:12.04:0,12,151	0/0:2,0:1:3.01:0,3,38	0/0:13,0:13:36.12:0,36,453	0/0:6,0:6:18.06:0,18,226	0/0:2,0:2:6.02:0,6,75	0/0:2,0:2:3.01:0,3,38	0/0:4,0:4:12.04:0,12,151	0/0:3,0:2:6.02:0,6,75	0/0:4,0:4:12:0,12,134	0/0:2,0:2:6.02:0,6,75
chr10	87327451	.	AC	A	3450.10	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=2.530;DP=681;FS=4.408;HRun=2;HaplotypeScore=94.0181;InbreedingCoeff=0.9995;MQ=79.42;MQ0=0;MQRankSum=-2.688;QD=36.70;ReadPosRankSum=1.300;VQSLOD=4.0608;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,1892	1/1:0,8:8:24.08:312,24,0	0/0:24,0:24:69.22:0,69,982	0/0:17,0:16:45.04:0,45,615	0/0:36,0:36:99:0,108,1617	0/0:19,0:19:57.19:0,57,853	0/0:23,0:23:66.19:0,66,947	0/0:31,0:31:93.28:0,93,1328	0/0:19,0:19:57.19:0,57,853	1/1:0,23:23:69.20:879,69,0	1/1:2,24:26:66.21:857,66,0	0/0:19,0:19:57.19:0,57,854	0/0:19,0:19:57.15:0,57,811	0/0:27,0:27:81.27:0,81,1211	0/0:27,0:27:81.27:0,81,1211	0/0:19,0:19:54.17:0,54,791	1/1:0,22:22:63.20:818,63,0	1/1:0,15:15:45.15:584,45,0	0/0:21,0:21:60.20:0,60,898	0/0:35,0:35:99:0,102,1505	0/0:48,0:48:99:0,144,2150	0/0:23,0:23:69.23:0,69,1034	0/0:17,0:17:51.17:0,51,764	0/0:15,0:15:45.15:0,45,675	0/0:24,0:24:69.23:0,69,1033	0/0:36,1:37:72.41:0,72,1562	0/0:29,0:28:87.29:0,87,1302	0/0:12,0:12:36.12:0,36,539
chr10	87328556	.	A	AT	440.97	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-4.562;DP=429;FS=9.744;HRun=9;HaplotypeScore=39.4800;InbreedingCoeff=0.5907;MQ=72.37;MQ0=0;MQRankSum=0.380;QD=15.21;ReadPosRankSum=0.047;VQSLOD=2.3289;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:20:48.13:531,48,0	0/0:7,0:7:18:0,18,156	0/1:9,0:9:14.21:14,0,39	0/0:5,0:5:5.79:0,6,52	0/0:23,0:23:65.97:0,66,569	0/0:20,0:20:47.97:0,48,417	0/0:14,0:14:32.99:0,33,286	0/0:30,0:30:74.94:0,75,645	0/0:13,0:13:35.98:0,36,310	0/0:17,0:17:35.99:0,36,312	0/0:15,0:15:38.99:0,39,339	0/0:13,0:13:14.53:0,15,288	0/0:11,0:11:32.99:0,33,286	0/0:12,0:12:26.19:0,26,216	0/0:20,0:20:56.99:0,57,495	0/0:12,0:12:35.99:0,36,313	0/0:15,0:15:41.99:0,42,365	0/0:19,0:19:44.96:0,45,391	0/0:23,0:23:53.98:0,54,469	0/0:19,0:19:26.72:0,27,392	0/0:10,0:10:29.99:0,30,260	0/0:10,0:10:29.99:0,30,260	0/0:14,0:14:32.97:0,33,282	0/0:9,0:9:17.98:0,18,156	0/0:12,0:12:32.98:0,33,281	0/0:16,0:16:44.98:0,45,389	0/0:34,0:34:69.45:0,69,754	0/0:7,0:7:21:0,21,182
chr10	87332163	.	TCA	T	251.32	PASS	AB=0.891;AC=10;AF=0.200;AN=50;BaseQRankSum=1.703;DP=727;FS=1.907;HRun=0;HaplotypeScore=82.8443;InbreedingCoeff=0.1472;MQ=68.03;MQ0=52;MQRankSum=0.206;QD=1.48;ReadPosRankSum=0.003;VQSLOD=1.3115;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:14.97:0,15,121	0/0:6,0:6:5.91:0,6,58	./.	./.	0/0:11,0:11:9.03:0,9,124	1/1:11,1:15:8.68:60,9,0	0/1:28,6:35:23.45:136,0,23	0/0:26,0:24:5.93:0,6,40	0/0:18,0:17:24.03:0,24,310	0/0:24,0:24:18.94:0,19,249	0/0:13,0:13:9.01:0,9,106	0/1:20,0:21:22.21:22,0,239	0/1:19,3:22:5.09:5,0,290	0/1:16,1:17:14.10:14,0,201	0/0:25,0:25:18.04:0,18,245	0/1:16,4:20:46.26:46,0,158	0/0:35,2:37:9.94:0,10,494	0/0:32,1:31:3.80:0,4,406	0/0:12,0:12:11.95:0,12,105	0/0:23,0:23:14.95:0,15,118	0/0:59,0:59:36.06:0,36,400	0/1:20,0:21:16.12:29,0,16	1/1:17,0:16:8.81:77,9,0	0/0:29,1:28:27.07:0,27,376	0/0:16,0:16:18.06:0,18,263	0/0:28,0:26:26.98:0,27,257	0/0:15,0:14:9:0,9,89	./.
chr10	87332175	.	A	ACACACG	319.93	PASS	AB=0.763;AC=2;AF=0.036;AN=56;BaseQRankSum=0.996;DP=797;FS=2.964;HRun=0;HaplotypeScore=138.0484;InbreedingCoeff=0.0802;MQ=52.80;MQ0=56;MQRankSum=-3.103;QD=4.38;ReadPosRankSum=0.872;VQSLOD=2.6783;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,27:39:5.91:372,0,6	0/0:6,0:6:17.98:0,18,168	0/0:62,0:13:23.98:0,24,228	0/0:63,0:11:23.64:0,24,242	0/0:15,0:15:35.92:0,36,335	0/0:20,0:20:47.98:0,48,466	0/0:46,0:45:95.57:0,96,970	0/0:30,0:28:31.02:0,31,439	0/0:23,0:21:51.02:0,51,686	0/0:24,0:24:71.96:0,72,734	0/0:16,0:16:32.96:0,33,273	0/0:29,0:29:73.47:0,73,811	0/0:25,0:24:45.35:0,45,765	0/0:24,0:24:62.85:0,63,707	0/0:25,0:25:62.99:0,63,740	0/0:23,0:23:45.02:0,45,536	0/0:49,0:49:99:0,126,1441	0/1:32,0:31:36.77:37,0,814	0/0:13,0:13:20.26:0,20,225	0/0:18,0:18:7.24:0,7,93	0/0:66,0:66:2.72:0,3,756	0/0:24,0:23:50.90:0,51,437	0/0:17,0:16:27:0,27,274	0/0:35,0:33:65.92:0,66,843	0/0:25,0:25:59.99:0,60,675	0/0:29,0:27:27.56:0,28,371	0/0:15,0:14:7.25:0,7,104	0/0:2,0:2:5.96:0,6,44
chr10	87332181	.	A	ACG	1386.24	PASS	AB=0.718;AC=11;AF=0.196;AN=56;BaseQRankSum=-6.322;DP=802;FS=4.372;HRun=0;HaplotypeScore=88.3926;InbreedingCoeff=0.6270;MQ=52.29;MQ0=56;MQRankSum=1.316;QD=7.45;ReadPosRankSum=-1.266;VQSLOD=2.9128;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:14.48:0,14,140	0/0:6,0:6:14.99:0,15,137	0/0:48,0:9:23.89:0,24,194	0/0:65,0:12:23.90:0,24,203	0/0:15,0:15:35.90:0,36,313	0/0:22,0:22:53.89:0,54,438	0/0:46,0:45:98.86:0,99,835	0/1:34,0:32:20.47:369,0,20	0/0:22,0:20:51.01:0,51,544	0/0:24,0:24:68.77:0,69,653	0/0:17,0:17:35.96:0,36,299	0/0:29,0:29:74.90:0,75,708	0/0:25,0:24:38.04:0,38,574	0/0:25,0:25:68.93:0,69,644	0/0:24,0:24:68.99:0,69,676	0/0:23,0:23:47.98:0,48,458	0/0:48,0:48:99:0,129,1223	0/0:33,0:31:60.83:0,61,762	1/1:2,12:15:11.02:232,11,0	1/1:4,15:19:15.05:262,15,0	0/1:26,44:70:93.92:94,0,189	0/0:24,0:23:53.91:0,54,442	0/0:18,0:17:32.97:0,33,279	0/0:33,0:31:68.85:0,69,700	0/0:26,0:26:65.98:0,66,632	1/1:3,26:29:27.44:453,27,0	0/1:2,11:12:9.35:97,0,9	1/1:3,0:3:5.95:43,6,0
chr10	87332381	.	C	CG	17276.16	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-16.049;DP=692;FS=1.299;HRun=1;HaplotypeScore=66.1778;InbreedingCoeff=0.9954;MQ=83.63;MQ0=0;MQRankSum=-2.158;QD=39.09;ReadPosRankSum=1.500;VQSLOD=5.5237;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,53:55:99:2241,151,0	1/1:0,9:9:27.09:404,27,0	0/0:24,0:24:69.14:0,69,823	0/0:19,0:19:45.02:0,45,508	0/0:13,0:13:39.13:0,39,505	1/1:2,21:23:60.20:897,60,0	1/1:0,30:30:78.26:1166,78,0	1/1:1,29:30:84.16:1115,84,0	0/0:23,0:23:66.13:0,66,794	1/1:0,29:30:90.30:1329,90,0	1/1:1,16:17:48.11:683,48,0	0/0:30,0:30:78.24:0,78,989	0/0:24,0:25:71.93:0,72,901	0/0:21,0:21:60.17:0,60,749	0/0:32,0:32:96.31:0,96,1245	0/0:19,0:19:57.16:0,57,712	1/1:0,25:25:72.24:1078,72,0	1/1:0,24:24:60.20:898,60,0	1/1:1,22:23:66.12:917,66,0	1/1:0,24:24:72.15:1026,72,0	1/1:0,32:32:69.23:1033,69,0	1/1:2,22:25:63.16:914,63,0	1/1:1,29:30:72.13:1043,72,0	0/0:26,0:26:78.25:0,78,1000	0/0:18,0:18:54.16:0,54,675	1/1:0,31:31:90.28:1322,90,0	1/1:0,30:30:69.23:1032,69,0	1/1:0,4:4:12.04:179,12,0
chr10	87333082	.	CTTGA	C	6165.58	PASS	AB=0.500;AC=33;AF=0.589;AN=56;BaseQRankSum=13.017;DP=450;FS=8.689;HRun=0;HaplotypeScore=139.0373;InbreedingCoeff=0.8637;MQ=84.85;MQ0=1;MQRankSum=-13.413;QD=30.37;ReadPosRankSum=4.111;VQSLOD=4.6133;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:0,17:20:0:0,0,0	1/1:0,6:7:9.03:158,9,0	0/0:26,0:23:69.08:0,69,1682	0/0:33,0:30:70.35:0,70,1909	0/0:25,0:25:75.24:0,75,1890	1/1:0,9:13:12.04:194,12,0	1/1:0,7:7:3.01:62,3,0	1/1:0,20:20:60.19:1211,60,0	0/0:17,0:17:51.18:0,51,1437	1/1:0,7:11:27.09:523,27,0	1/1:1,7:13:15.01:239,15,0	0/0:16,0:16:48.16:0,48,1357	0/0:24,0:24:72.25:0,72,1968	0/0:18,0:18:54.19:0,54,1497	0/0:21,0:21:63.22:0,63,1800	0/0:16,0:16:48.16:0,48,1356	1/1:0,10:11:8.99:167,9,0	1/1:0,11:15:39.13:759,39,0	1/1:1,9:11:30.10:609,30,0	1/1:0,4:9:12.04:207,12,0	1/1:1,11:14:2.53:52,3,0	1/1:0,3:7:9.03:145,9,0	1/1:0,5:11:15.05:240,15,0	0/0:28,0:28:84.25:0,84,2300	0/0:22,0:22:66.23:0,66,1829	1/1:0,8:10:27.09:504,27,0	1/1:0,14:23:57.20:1058,57,0	1/1:0,1:1:3.01:39,3,0
chr10	87333086	.	AACACACACACACACGCACGCGTGCGCGCG	A	10677.55	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=13.750;DP=430;FS=3.880;HRun=0;HaplotypeScore=322.6376;InbreedingCoeff=0.8802;MQ=79.78;MQ0=1;MQRankSum=-13.681;QD=52.60;ReadPosRankSum=3.631;VQSLOD=3.1164;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,3:20:9.91:112,10,0	1/1:6,1:7:9.02:452,9,0	0/0:24,0:19:57.17:0,57,1293	0/0:31,0:27:78.13:0,78,1867	0/0:19,0:19:57.15:0,57,5617	1/1:9,4:13:12.04:853,12,0	1/1:7,0:7:3:26,3,0	1/1:20,0:20:52.57:412,53,0	0/0:17,0:17:51.17:0,51,5314	1/1:7,4:11:12.51:767,13,0	1/1:8,5:13:15.05:1063,15,0	0/0:16,0:16:48.16:0,48,4237	0/0:21,0:21:63.22:0,63,6636	0/0:17,0:17:51.17:0,51,5518	0/0:20,0:20:60.20:0,60,5237	0/0:15,0:15:45.15:0,45,4245	1/1:10,1:11:7.26:243,7,0	1/1:11,4:15:27.91:1072,28,0	1/1:10,1:11:29.25:440,29,0	1/1:4,5:9:12.03:665,12,0	1/1:12,2:14:4.38:213,4,0	1/1:3,4:7:9.03:639,9,0	1/1:5,6:11:15.05:1064,15,0	0/0:27,0:27:81.24:0,81,9240	0/0:20,0:20:60.21:0,60,5517	1/1:8,2:10:23.16:557,23,0	1/1:14,9:23:53.01:2101,53,0	0/1:1,0:1:0:0,0,0
chr10	87333416	.	ATTTTCTTTCTTT	A	2207.87	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=1.656;DP=412;FS=0.687;HRun=0;HaplotypeScore=171.5449;InbreedingCoeff=0.8176;MQ=58.51;MQ0=7;MQRankSum=-0.701;QD=49.06;ReadPosRankSum=0.681;VQSLOD=3.1234;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:62.26:0,62,862	0/0:9,0:9:21.04:0,21,468	0/0:22,0:11:25.23:0,25,492	0/0:9,0:6:8.93:0,9,239	0/0:32,0:32:84.20:0,84,3008	1/1:6,10:18:47.99:1313,48,0	1/1:6,3:6:15.05:429,15,0	0/0:28,0:28:47.94:0,48,506	0/0:6,0:6:12.04:0,12,397	0/0:13,0:12:19.69:0,20,361	0/0:17,0:17:21.12:0,21,356	0/0:12,0:12:33.11:0,33,1633	0/0:13,0:12:30.99:0,31,1381	0/0:9,0:9:27.09:0,27,1014	0/0:14,0:14:33.03:0,33,1272	0/0:8,0:8:24.04:0,24,646	0/0:31,0:27:69.83:0,70,1324	0/0:20,0:18:30.98:0,31,657	0/0:22,0:21:33.03:0,33,193	0/1:6,0:6:3.93:4,0,76	0/0:9,0:9:13.67:0,14,195	1/1:0,6:6:12.04:264,12,0	1/1:3,3:6:17.96:353,18,0	0/0:15,0:15:34.65:0,35,1465	0/0:13,0:13:33.09:0,33,1359	0/0:22,0:22:37.16:0,37,288	0/0:12,0:12:22.44:0,22,238	0/0:4,0:1:2.84:0,3,14
chr10	87333417	.	TTTTC	T	4928.69	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=4.187;DP=411;FS=5.244;HRun=0;HaplotypeScore=102.9416;InbreedingCoeff=0.9018;MQ=58.27;MQ0=7;MQRankSum=-3.320;QD=19.18;ReadPosRankSum=1.060;VQSLOD=4.4332;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:26,1:26:55.81:657,56,0	1/1:9,0:9:14:106,14,0	0/0:22,0:11:2.55:0,3,174	0/0:9,0:6:5.80:0,6,71	0/0:33,0:33:76.34:0,76,1093	1/1:18,0:18:44.04:321,44,0	1/1:9,0:6:13.25:111,13,0	1/1:28,0:28:53.95:579,54,0	0/0:6,0:6:8.97:0,9,120	1/1:13,0:12:26.96:233,27,0	1/1:17,0:17:24.73:203,25,0	0/0:11,0:11:33.08:0,33,582	0/0:13,0:12:33.04:0,33,514	0/0:9,0:9:25.63:0,26,313	0/0:14,0:14:27.03:0,27,463	0/0:8,0:8:20.96:0,21,210	1/1:27,4:27:51.67:537,52,0	1/1:20,0:18:22.69:230,23,0	1/1:22,0:21:51.09:600,51,0	1/1:6,0:6:17.95:199,18,0	1/1:8,0:8:17.92:140,18,0	1/1:6,0:6:11.91:89,12,0	1/1:6,0:6:11.98:104,12,0	0/0:16,0:16:14.67:0,15,482	0/0:13,0:13:29.72:0,30,482	1/1:21,0:21:45.02:523,45,0	1/1:12,0:12:24.02:257,24,0	1/1:4,0:1:3.01:39,3,0
chr10	87333421	.	CTTTCTTT	C	4961.44	PASS	AB=0.978;AC=28;AF=0.500;AN=56;BaseQRankSum=0.789;DP=403;FS=0.000;HRun=0;HaplotypeScore=123.9344;InbreedingCoeff=0.5929;MQ=54.57;MQ0=8;MQRankSum=-2.553;QD=20.42;ReadPosRankSum=1.935;VQSLOD=4.3777;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:28:11.42:334,11,0	0/0:9,0:9:0.68:0,1,100	0/0:21,0:10:3.22:0,3,233	0/0:8,0:5:5.80:0,6,110	0/0:33,0:32:88.96:0,89,1972	1/1:18,0:18:29.28:514,29,0	1/1:8,0:5:12.78:128,13,0	1/1:16,5:25:51.08:768,51,0	0/0:7,0:7:15.04:0,15,301	0/1:11,0:10:16.51:129,0,17	0/1:15,1:16:10.92:149,0,11	0/0:12,0:12:36.11:0,36,1009	0/0:14,0:14:36.58:0,37,1023	0/0:9,0:9:27.09:0,27,642	0/0:11,0:11:30.03:0,30,754	0/0:8,0:8:23.99:0,24,397	0/1:33,0:30:69.23:69,0,345	0/1:21,0:19:92.76:93,0,164	1/1:12,10:22:47.07:894,47,0	1/1:2,2:6:18.02:286,18,0	1/1:7,0:7:17.92:140,18,0	1/1:6,0:6:11.92:109,12,0	1/1:6,0:6:11.89:143,12,0	0/0:15,0:15:35.66:0,36,859	0/0:12,0:12:33.06:0,33,817	1/1:10,6:17:45.11:785,45,0	1/1:6,5:12:7.18:353,7,0	1/1:4,0:1:3.01:69,3,0
chr10	87333422	.	TTTC	T	5039.10	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=3.923;DP=403;FS=0.000;HRun=0;HaplotypeScore=96.9025;InbreedingCoeff=0.9153;MQ=54.38;MQ0=8;MQRankSum=-4.805;QD=20.16;ReadPosRankSum=-0.230;VQSLOD=4.5653;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:28:62.47:600,62,0	1/1:5,3:8:19.50:213,20,0	0/0:20,0:10:4.86:0,5,142	0/0:8,0:5:5.74:0,6,60	0/0:34,0:33:80.36:0,80,947	1/1:18,0:18:43.94:283,44,0	1/1:8,0:5:11.96:97,12,0	1/1:25,0:25:57.83:551,58,0	0/0:7,0:7:11.76:0,12,123	1/1:10,1:10:26.97:253,27,0	1/1:3,13:16:26.82:253,27,0	0/0:12,0:12:35.82:0,36,493	0/0:15,0:14:35.81:0,36,449	0/0:9,0:9:22.43:0,22,250	0/0:11,0:11:26.72:0,27,374	0/0:8,0:8:20.74:0,21,166	1/1:27,7:30:17.16:596,17,0	1/1:20,1:19:41.36:386,41,0	1/1:23,0:22:57.43:581,57,0	1/1:6,0:6:16.79:164,17,0	1/1:7,0:7:17.92:141,18,0	1/1:6,0:6:11.89:83,12,0	1/1:6,0:6:11.94:92,12,0	0/0:15,0:15:23.18:0,23,422	0/0:13,0:13:25.49:0,25,398	1/1:16,0:16:44.69:473,45,0	1/1:12,0:12:24.84:237,25,0	1/1:4,0:1:3.01:35,3,0
chr10	87333423	.	TTC	T	4624.90	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=4.292;DP=398;FS=1.504;HRun=0;HaplotypeScore=90.5863;InbreedingCoeff=0.9037;MQ=54.14;MQ0=10;MQRankSum=-4.875;QD=18.80;ReadPosRankSum=-0.405;VQSLOD=4.4969;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:27:66.38:560,66,0	1/1:8,0:8:20.96:209,21,0	0/0:21,0:10:9.09:0,9,118	0/0:8,0:5:5.73:0,6,50	0/0:34,0:33:54.74:0,55,748	1/1:18,0:18:43.69:266,44,0	1/1:8,0:5:14.30:95,14,0	1/1:24,1:24:58.22:517,58,0	0/0:7,0:7:13.66:0,14,107	1/1:11,0:10:26.96:239,27,0	1/1:14,0:14:26.82:220,27,0	0/0:12,0:12:35.89:0,36,397	0/0:15,0:14:32.51:0,33,335	0/0:9,0:9:10.24:0,10,165	0/0:10,0:10:23.03:0,23,284	0/0:8,0:8:18.09:0,18,115	1/1:31,3:30:4.28:487,4,0	1/1:19,2:19:38.65:347,39,0	1/1:23,0:22:59.79:559,60,0	1/1:6,0:6:16.55:148,17,0	1/1:6,0:6:17.92:141,18,0	1/1:6,0:6:11.83:77,12,0	1/1:5,0:5:11.82:80,12,0	0/0:15,0:15:23:0,23,333	0/0:13,0:13:27.57:0,28,326	1/1:16,0:16:44.12:426,44,0	1/1:12,0:12:25.23:225,25,0	1/1:5,0:1:3:28,3,0
chr10	87333424	.	TC	T	4200.99	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=4.439;DP=399;FS=11.104;HRun=1;HaplotypeScore=85.0713;InbreedingCoeff=0.7466;MQ=53.82;MQ0=14;MQRankSum=-5.779;QD=15.85;ReadPosRankSum=-1.412;VQSLOD=2.2825;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:26:66.17:473,66,0	1/1:7,1:8:20.94:176,21,0	0/0:21,0:10:10.55:0,11,110	0/0:8,0:5:5.73:0,6,43	0/0:33,0:32:45.06:0,45,567	1/1:18,0:18:45.04:260,45,0	1/1:8,0:5:14.09:88,14,0	1/1:25,0:24:58.47:460,58,0	0/0:7,0:7:11.99:0,12,82	1/1:11,0:10:26.96:233,27,0	1/1:14,0:14:26.79:200,27,0	0/0:12,0:12:31.98:0,32,299	0/0:14,1:14:4.91:0,5,225	0/1:9,0:9:39.38:39,0,96	0/0:9,1:10:5.47:0,5,200	0/1:8,0:8:5.40:5,0,82	1/1:33,1:30:9.23:410,9,0	1/1:22,1:19:40.46:335,40,0	1/1:23,0:22:58.33:476,58,0	1/1:7,0:6:17.47:129,17,0	1/1:6,0:6:17.92:141,18,0	1/1:6,0:6:11.50:71,11,0	1/1:5,0:5:11.16:67,11,0	0/0:15,0:15:23.87:0,24,255	0/0:13,0:13:26.03:0,26,263	1/1:16,0:16:44.97:398,45,0	1/1:11,0:11:26.64:213,27,0	1/1:6,0:1:3:27,3,0
chr10	87333455	.	CG	C	4936.52	PASS	AB=0.594;AC=31;AF=0.596;AN=52;BaseQRankSum=8.456;DP=344;FS=7.564;HRun=2;HaplotypeScore=75.4034;InbreedingCoeff=0.6776;MQ=38.26;MQ0=39;MQRankSum=-5.108;QD=22.96;ReadPosRankSum=2.231;VQSLOD=4.3764;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:7,17:21:40.14:600,0,40	1/1:0,5:5:15.05:195,15,0	./.	./.	0/0:23,0:21:36.11:0,36,514	1/1:1,13:14:24.08:305,24,0	1/1:5,11:9:15.05:194,15,0	1/1:2,17:17:51.16:650,51,0	0/0:14,0:13:29.15:0,29,433	1/1:1,7:8:18.94:232,19,0	1/1:2,6:6:15.05:189,15,0	0/0:12,0:10:27.09:0,27,384	0/0:10,0:9:18.06:0,18,257	0/0:10,0:7:14.87:0,15,222	0/0:20,0:19:48.16:0,48,686	0/0:14,0:12:24.08:0,24,354	1/1:8,18:19:5.26:433,5,0	0/1:8,9:12:65.67:208,0,66	1/1:1,10:9:27.09:346,27,0	1/1:1,5:5:12.04:152,12,0	1/1:3,5:5:12.04:155,12,0	1/1:1,1:1:3.01:39,3,0	1/1:4,6:6:18.06:232,18,0	0/0:10,0:10:18.95:0,19,265	0/0:14,0:14:36.07:0,36,485	0/1:2,11:12:8.84:388,0,9	1/1:1,20:20:45.15:579,45,0	1/1:5,2:2:3.01:39,3,0
chr10	87333461	.	TGGGGACCGAACCCAGG	T	2581.78	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=6.654;DP=362;FS=15.357;HRun=0;HaplotypeScore=177.4626;InbreedingCoeff=0.8706;MQ=38.85;MQ0=40;MQRankSum=-4.627;QD=61.47;ReadPosRankSum=3.931;VQSLOD=2.4247;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:22:63.22:0,63,4161	0/0:6,0:6:18.06:0,18,1170	./.	./.	0/0:20,0:18:39.13:0,39,2929	1/1:5,9:14:21.07:1004,21,0	1/1:9,7:9:15.05:718,15,0	0/0:22,0:20:54.19:0,54,3275	0/0:15,0:14:36.12:0,36,2877	0/0:10,0:10:30.10:0,30,2376	0/0:9,0:7:18.06:0,18,1275	0/0:12,0:10:27.09:0,27,1991	0/0:10,0:9:18.06:0,18,1259	0/0:11,0:8:17.90:0,18,1436	0/0:21,0:20:51.18:0,51,4009	0/0:12,0:10:24.08:0,24,1918	0/0:30,0:23:54.19:0,54,3903	0/0:16,0:11:23.61:0,24,1823	0/0:14,0:11:30.10:0,30,2135	0/0:7,0:6:15.05:0,15,1180	0/0:9,0:5:12.04:0,12,915	1/1:1,1:1:3.01:144,3,0	1/1:4,6:6:18.06:861,18,0	0/0:11,0:11:27.09:0,27,1963	0/0:14,0:14:36.12:0,36,2845	0/0:17,0:16:48.16:0,48,3525	0/0:22,0:21:48.16:0,48,3778	0/0:7,0:2:3.01:0,3,238
chr10	87333879	.	G	GCAAA	5583.91	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=11.655;DP=472;FS=12.127;HRun=0;HaplotypeScore=110.5991;InbreedingCoeff=0.2489;MQ=78.28;MQ0=0;MQRankSum=-8.066;QD=19.32;ReadPosRankSum=-0.786;VQSLOD=3.5196;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:38.70:398,0,39	0/1:9,0:9:15.55:52,0,16	0/0:13,0:13:17.55:0,18,260	0/0:17,0:17:29.66:0,30,384	0/0:20,0:20:54.09:0,54,906	1/1:2,14:17:27.09:653,27,0	1/1:6,16:22:39.12:887,39,0	0/1:22,0:22:69.64:320,0,70	0/0:20,0:20:60.17:0,60,1019	0/1:20,0:20:75.52:94,0,76	0/1:16,0:16:46.73:98,0,47	0/0:13,0:13:39.12:0,39,640	0/0:9,0:9:24.06:0,24,374	0/0:16,0:16:42.11:0,42,637	0/0:18,0:18:45.14:0,45,748	0/0:13,0:13:39.12:0,39,652	0/1:21,0:21:54.32:122,0,54	1/1:20,0:20:28.22:240,28,0	0/1:15,0:15:59.48:159,0,59	0/1:16,0:16:10.52:375,0,11	0/1:19,0:19:63.27:252,0,63	1/1:6,10:16:30.02:651,30,0	1/1:0,8:9:17.80:394,18,0	0/0:29,0:29:84.25:0,84,1363	0/0:15,0:15:42.14:0,42,721	0/1:22,0:22:61.29:393,0,61	1/1:16,0:16:21.74:453,22,0	1/1:3,0:3:3.01:41,3,0
chr10	87333884	.	C	CAAAA	9046.22	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=8.482;DP=537;FS=4.713;HRun=10;HaplotypeScore=122.7252;InbreedingCoeff=0.7130;MQ=73.47;MQ0=0;MQRankSum=-7.546;QD=26.15;ReadPosRankSum=-4.251;VQSLOD=2.2647;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:9,23:35:39.12:804,39,0	1/1:2,0:10:16.74:174,17,0	0/0:10,0:10:12.05:0,12,168	0/0:17,0:17:20.91:0,21,300	0/0:23,0:23:53.45:0,53,716	0/1:18,0:18:12.52:441,0,13	0/1:23,0:24:19.30:613,0,19	1/1:9,17:31:58.81:916,59,0	0/0:20,0:21:57.08:0,57,782	1/1:5,0:22:41.93:429,42,0	1/1:12,0:18:39.09:448,39,0	0/0:17,0:17:38.92:0,39,507	0/0:9,0:9:17.94:0,18,254	0/0:16,0:16:35.18:0,35,437	0/0:18,0:18:39.06:0,39,552	0/0:12,0:13:36.06:0,36,491	1/1:5,0:23:30.04:354,30,0	1/1:1,0:22:54.06:636,54,0	1/1:8,5:17:23.99:402,24,0	1/1:4,13:21:36.05:657,36,0	1/1:5,18:25:18.06:423,18,0	0/1:15,0:15:11.63:437,0,12	0/1:9,0:9:2.96:267,0,3	0/0:27,0:30:75.11:0,75,1005	0/0:17,0:17:45.10:0,45,615	1/1:11,20:34:71.93:1031,72,0	1/1:11,6:20:56.59:953,57,0	1/1:1,1:2:3.01:62,3,0
chr10	87334889	.	G	GTC	16009.82	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-11.115;DP=509;FS=3.221;HRun=0;HaplotypeScore=68.0866;InbreedingCoeff=0.9967;MQ=58.72;MQ0=1;MQRankSum=0.210;QD=50.99;ReadPosRankSum=1.317;VQSLOD=5.8297;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:32:60.21:1216,60,0	1/1:0,8:9:20.93:426,21,0	0/0:14,0:14:39.08:0,39,569	0/0:22,0:20:52.96:0,53,729	0/0:18,0:18:51.16:0,51,806	1/1:1,18:20:54.19:1096,54,0	1/1:0,20:21:57.20:1154,57,0	1/1:1,20:21:60.19:1137,60,0	0/0:25,0:25:60.18:0,60,954	1/1:1,17:18:54.19:1072,54,0	1/1:1,15:16:39.13:792,39,0	0/0:9,0:9:24.05:0,24,341	0/0:20,0:20:48.09:0,48,757	0/0:16,0:16:39.11:0,39,611	0/0:13,0:13:39.13:0,39,636	0/0:21,0:20:57.15:0,57,858	1/1:0,19:19:39.13:791,39,0	1/1:1,23:23:57.20:1156,57,0	1/1:1,13:14:39.13:792,39,0	1/1:0,17:17:45.15:913,45,0	1/1:0,29:29:72.05:1460,72,0	1/1:1,18:20:48.05:961,48,0	1/1:0,12:12:32.87:670,33,0	0/0:19,0:18:48.16:0,48,777	0/0:17,0:17:48.16:0,48,782	1/1:0,19:19:54.19:1097,54,0	1/1:1,16:18:48.16:973,48,0	1/1:0,5:5:15.05:304,15,0
chr10	87335715	.	A	AG	9504.76	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-8.571;DP=488;FS=4.730;HRun=3;HaplotypeScore=55.4977;InbreedingCoeff=0.9168;MQ=64.12;MQ0=6;MQRankSum=-3.890;QD=29.43;ReadPosRankSum=2.429;VQSLOD=4.3289;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:30:66.22:923,66,0	1/1:3,5:8:14.84:188,15,0	0/0:14,0:8:21.05:0,21,240	0/0:19,0:15:42.02:0,42,464	0/0:20,0:20:54.17:0,54,648	1/1:3,16:19:39.03:546,39,0	1/1:0,16:16:48.12:650,48,0	1/1:3,11:13:33.11:459,33,0	0/0:17,0:17:45.10:0,45,524	1/1:7,16:23:60.13:794,60,0	1/1:2,13:15:36.08:482,36,0	0/0:19,0:19:51.16:0,51,612	0/0:24,0:24:72.22:0,72,863	0/0:10,0:10:30.09:0,30,360	0/0:20,0:20:60.17:0,60,709	0/0:14,0:14:42.13:0,42,504	1/1:4,26:30:69.17:965,69,0	1/1:0,13:14:28.34:455,28,0	1/1:4,7:10:15.05:210,15,0	1/1:5,17:22:33.11:462,33,0	1/1:2,21:23:60.20:840,60,0	1/1:0,16:16:39.13:546,39,0	1/1:1,11:12:24.08:336,24,0	0/1:19,0:19:27.05:27,0,489	0/0:7,0:7:18.06:0,18,216	1/1:1,17:19:43.39:665,43,0	1/1:2,16:17:42.10:560,42,0	1/1:1,11:12:30.06:398,30,0
chr10	87335789	.	GA	G	2157.30	PASS	AB=0.746;AC=28;AF=0.519;AN=54;BaseQRankSum=4.347;DP=401;FS=19.126;HRun=8;HaplotypeScore=90.3322;InbreedingCoeff=0.5327;MQ=49.15;MQ0=19;MQRankSum=-8.984;QD=9.42;ReadPosRankSum=4.149;VQSLOD=0.7214;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:19:13.65:218,14,0	1/1:2,2:4:5.98:50,6,0	0/1:29,0:5:7.19:7,0,79	0/0:48,0:9:11.94:0,12,105	0/0:11,0:11:23.90:0,24,266	1/1:3,9:12:26.72:242,27,0	1/1:3,8:9:21.02:202,21,0	1/1:8,8:10:21.03:203,21,0	0/0:17,0:17:33.19:0,33,346	1/1:6,5:11:20.92:182,21,0	1/1:3,2:5:5.99:58,6,0	0/0:13,0:13:27.54:0,28,315	0/0:14,0:14:35.26:0,35,383	0/0:12,0:11:20.85:0,21,230	0/0:13,0:13:35.74:0,36,376	0/0:15,0:15:39.92:0,40,385	0/1:11,8:17:15.25:152,0,15	0/1:2,4:6:21.21:100,0,21	0/1:8,8:13:5.13:198,0,5	1/1:4,12:16:6.66:211,7,0	./.	1/1:3,5:8:9.01:87,9,0	1/1:2,4:6:6:57,6,0	0/0:16,0:15:18.01:0,18,201	0/0:8,0:8:15.46:0,15,166	0/1:11,10:19:11.43:227,0,11	1/1:5,9:12:10.88:115,11,0	0/1:10,2:9:2.71:47,0,3
chr10	87335797	.	AGAACC	A	2561.89	PASS	AB=0.904;AC=18;AF=0.333;AN=54;BaseQRankSum=3.065;DP=434;FS=0.482;HRun=0;HaplotypeScore=97.2104;InbreedingCoeff=0.1576;MQ=47.92;MQ0=25;MQRankSum=-5.378;QD=15.25;ReadPosRankSum=-3.304;VQSLOD=2.4182;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:26:25.04:0,25,213	0/1:2,0:2:8.48:41,0,8	0/0:44,0:7:6:0,6,277	0/0:61,0:10:12.91:0,13,105	0/0:10,0:10:26.86:0,27,332	1/1:11,0:13:21.59:320,22,0	0/1:11,0:10:26.54:139,0,27	0/0:17,1:9:21.58:0,22,119	0/0:14,0:14:41.16:0,41,724	0/1:8,1:9:21.44:105,0,21	0/1:3,1:5:12.38:161,0,12	0/0:12,0:12:20.21:0,20,528	0/0:14,0:14:8.31:0,8,481	0/0:10,1:10:24.07:0,24,494	0/0:10,0:10:26.62:0,27,487	0/0:14,0:14:41.70:0,42,692	1/1:13,9:20:24.73:521,25,0	1/1:7,2:9:7.52:270,8,0	0/1:17,0:17:99:112,0,221	0/1:17,2:19:25.86:284,0,26	./.	1/1:7,0:7:2.40:140,2,0	0/1:4,2:6:0.17:113,0,0	0/0:18,0:16:18.22:0,18,293	0/0:11,0:11:33.06:0,33,558	0/1:19,2:19:99:366,0,188	0/1:15,0:12:39.53:121,0,40	0/1:10,1:9:40.79:41,0,63
chr10	87335803	.	A	AAG	2081.43	PASS	AB=0.901;AC=15;AF=0.278;AN=54;BaseQRankSum=-0.044;DP=435;FS=1.877;HRun=0;HaplotypeScore=93.0412;InbreedingCoeff=0.1376;MQ=47.80;MQ0=28;MQRankSum=-5.887;QD=9.01;ReadPosRankSum=-0.171;VQSLOD=3.3557;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,13:31:25.88:589,26,0	0/0:2,0:2:5.20:0,5,28	0/1:46,0:8:13.14:13,0,212	0/0:64,0:11:10:0,10,81	0/0:9,0:9:15.05:0,15,226	0/0:13,0:13:7.09:0,7,109	0/1:13,0:12:14.27:14,0,74	1/1:11,6:8:9.16:223,9,0	0/0:15,0:15:35.09:0,35,491	0/1:10,0:10:21.71:22,0,37	0/0:6,0:6:9.05:0,9,42	0/0:12,0:12:24.04:0,24,327	0/0:13,0:13:27.03:0,27,362	0/0:10,0:9:21.03:0,21,295	0/0:7,0:7:21.05:0,21,299	0/0:13,0:13:39.08:0,39,551	0/1:22,0:20:7.52:8,0,101	0/0:7,0:7:19.18:0,19,89	0/1:14,5:18:54:366,0,54	0/1:12,6:18:45.88:212,0,46	./.	0/0:7,0:7:10.17:0,10,56	0/1:7,0:7:7.79:8,0,25	0/0:16,0:14:15.07:0,15,220	0/0:10,0:10:29.93:0,30,424	0/1:14,8:19:12.24:453,0,12	0/1:12,3:12:12:149,0,12	1/1:9,2:9:10.78:190,11,0
chr10	87335805	.	ACC	A	3080.40	PASS	AB=0.935;AC=34;AF=0.630;AN=54;BaseQRankSum=6.374;DP=399;FS=5.963;HRun=2;HaplotypeScore=70.9293;InbreedingCoeff=0.5260;MQ=50.71;MQ0=27;MQRankSum=-6.399;QD=11.32;ReadPosRankSum=-2.724;VQSLOD=-0.3783;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:26,3:30:2.35:325,2,0	1/1:2,0:2:3.89:31,4,0	0/0:48,0:9:16.81:0,17,198	0/1:62,1:11:15.14:15,0,78	0/0:7,0:7:17.91:0,18,203	1/1:3,9:12:33:401,33,0	1/1:2,7:8:20.26:226,20,0	1/1:11,2:5:2.08:40,2,0	0/0:13,2:15:2.28:0,2,349	1/1:5,3:8:3.69:187,4,0	1/1:4,0:4:10.79:93,11,0	0/1:9,0:9:13.40:13,0,249	0/1:11,0:12:37.74:38,0,237	0/0:9,1:9:19.90:0,20,261	0/0:7,0:7:14.44:0,14,260	0/0:14,0:14:28.29:0,28,361	1/1:12,9:19:48.75:488,49,0	1/1:3,4:7:21.05:260,21,0	1/1:11,4:14:10.16:223,10,0	1/1:10,5:15:30.72:284,31,0	./.	1/1:2,2:4:11.82:112,12,0	1/1:6,0:6:12:123,12,0	0/0:16,0:14:13.72:0,14,168	0/0:10,0:10:28.45:0,28,282	1/1:11,9:17:17.39:262,17,0	1/1:5,4:7:13.53:124,14,0	0/1:8,2:9:18.22:26,0,18
chr10	87335996	.	CAT	C	3729.97	PASS	AB=0.800;AC=33;AF=0.611;AN=54;BaseQRankSum=6.231;DP=244;FS=5.455;HRun=0;HaplotypeScore=29.6843;InbreedingCoeff=0.6845;MQ=61.62;MQ0=2;MQRankSum=1.205;QD=20.38;ReadPosRankSum=0.367;VQSLOD=2.9166;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:14:24.08:308,24,0	1/1:2,2:4:6.02:77,6,0	./.	0/0:10,0:3:2.99:0,3,23	0/0:13,0:13:27.09:0,27,442	1/1:1,16:17:15.05:193,15,0	1/1:0,3:3:6.02:77,6,0	1/1:4,25:23:54.12:689,54,0	0/0:6,0:6:9.03:0,9,151	1/1:4,4:8:12.02:138,12,0	1/1:2,4:6:9.03:116,9,0	0/0:2,0:2:3.01:0,3,51	0/0:4,0:4:6.02:0,6,101	0/0:4,0:4:12.04:0,12,193	0/0:3,0:2:3.01:0,3,51	0/0:3,0:3:9.03:0,9,152	1/1:2,25:27:42.14:540,42,0	1/1:2,21:23:33.11:424,33,0	1/1:2,10:11:27.06:326,27,0	1/1:0,1:1:3.01:39,3,0	1/1:2,6:8:9.03:116,9,0	0/1:3,1:4:18.93:33,0,19	1/1:0,5:5:3.01:39,3,0	0/0:5,0:5:11.99:0,12,162	0/0:7,0:7:15.05:0,15,253	1/1:3,8:11:21.07:270,21,0	1/1:0,6:6:15.05:192,15,0	1/1:0,5:5:12.04:154,12,0
chr10	87336305	.	G	GA	722.25	PASS	AB=0.838;AC=12;AF=0.214;AN=56;BaseQRankSum=-0.706;DP=616;FS=11.059;HRun=15;HaplotypeScore=141.0122;InbreedingCoeff=0.1375;MQ=70.02;MQ0=0;MQRankSum=0.634;QD=3.37;ReadPosRankSum=-2.175;VQSLOD=-0.3616;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,3:48:18.47:0,18,450	0/0:4,0:4:11.77:0,12,72	0/0:26,0:22:17.88:0,18,105	0/0:18,0:14:7.87:0,8,37	0/0:8,0:11:18.70:0,19,101	0/1:10,11:23:38.65:122,0,39	0/1:10,13:23:15.90:232,0,16	0/1:27,2:29:6.07:6,0,189	0/0:16,2:18:4.12:0,4,136	0/0:25,0:26:54.89:0,55,326	0/0:7,0:7:14.69:0,15,90	0/0:23,4:27:17.70:0,18,211	0/1:10,2:14:0.63:1,0,95	0/1:16,3:20:45.26:45,0,186	0/0:30,1:31:29.87:0,30,288	0/0:18,0:19:37.66:0,38,221	0/0:32,0:35:91.20:0,91,535	0/0:23,0:26:35.74:0,36,299	0/1:19,5:28:45.20:45,0,132	0/0:12,0:15:30.38:0,30,171	0/1:29,3:36:41.70:42,0,209	1/1:7,4:15:20.13:223,20,0	1/1:3,5:9:17.82:140,18,0	0/0:33,4:39:36.01:0,36,422	0/1:15,0:15:20.87:21,0,87	0/0:19,0:22:26.40:0,26,143	0/0:21,0:26:14.47:0,14,151	0/0:3,0:3:2.94:0,3,18
chr10	87338038	.	A	AGT	10771.94	PASS	AC=34;AF=0.630;AN=54;BaseQRankSum=-8.839;DP=376;FS=11.834;HRun=0;HaplotypeScore=39.3302;InbreedingCoeff=0.9814;MQ=59.94;MQ0=2;MQRankSum=-0.610;QD=41.59;ReadPosRankSum=0.213;VQSLOD=5.5121;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:18:45.15:810,45,0	1/1:1,6:8:21.07:376,21,0	./.	0/0:14,0:7:11.60:0,12,107	0/0:13,0:13:39.13:0,39,546	1/1:2,28:30:78.27:1404,78,0	1/1:3,12:15:36.12:648,36,0	1/1:3,20:23:57.14:962,57,0	0/0:9,0:9:24.07:0,24,319	1/1:0,11:12:33.11:576,33,0	1/1:1,10:12:18.06:323,18,0	0/0:11,0:11:30.10:0,30,420	0/0:13,0:13:39.13:0,39,546	0/0:11,0:11:27.09:0,27,377	0/0:12,0:12:33.11:0,33,462	0/0:10,0:10:30.10:0,30,420	1/1:2,24:25:48.16:864,48,0	1/1:2,13:15:36.12:648,36,0	1/1:2,11:13:30.08:499,30,0	1/1:0,8:8:21.07:378,21,0	1/1:1,10:11:25.90:437,26,0	1/1:0,14:13:24.08:432,24,0	1/1:1,17:18:42.14:756,42,0	0/0:10,0:10:30.10:0,30,419	0/0:10,0:10:21.06:0,21,278	1/1:1,19:21:60.16:1010,60,0	1/1:0,12:12:27.09:486,27,0	1/1:0,3:3:9.03:162,9,0
chr10	87338132	.	CAA	C	3517.04	PASS	AB=0.721;AC=30;AF=0.577;AN=52;BaseQRankSum=4.448;DP=219;FS=4.708;HRun=6;HaplotypeScore=33.5245;InbreedingCoeff=0.6913;MQ=43.79;MQ0=6;MQRankSum=-6.526;QD=22.12;ReadPosRankSum=0.940;VQSLOD=0.4877;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,4:7:12.04:160,12,0	1/1:1,3:4:9.03:120,9,0	./.	./.	0/0:10,0:10:21.07:0,21,333	1/1:9,5:14:30.02:337,30,0	1/1:0,2:2:6.02:80,6,0	1/1:7,16:21:45.14:598,45,0	0/0:4,0:4:6.02:0,6,90	1/1:3,7:9:24.08:318,24,0	1/1:3,7:10:18.06:239,18,0	0/0:4,0:4:9.03:0,9,144	0/0:7,0:6:15.05:0,15,261	0/0:4,0:4:9.01:0,9,107	0/0:5,0:5:9.03:0,9,144	0/0:6,0:6:12.04:0,12,199	1/1:6,14:15:13.18:379,13,0	1/1:3,6:7:18.06:240,18,0	1/1:5,8:12:18.62:368,19,0	0/1:5,3:8:5.38:71,0,5	1/1:3,0:3:2.92:17,3,0	1/1:3,5:8:9.03:114,9,0	1/1:4,4:8:12.04:159,12,0	0/0:3,0:3:8.99:0,9,119	0/0:13,0:13:17.99:0,18,270	0/1:6,4:10:49.39:132,0,49	1/1:4,6:10:3.65:185,4,0	0/0:4,0:3:8.52:0,9,43
chr10	87338133	.	AAAAAAT	A	2619.82	PASS	AB=1.000;AC=21;AF=0.404;AN=52;BaseQRankSum=0.729;DP=216;FS=9.757;HRun=0;HaplotypeScore=49.1023;InbreedingCoeff=0.1672;MQ=43.70;MQ0=6;MQRankSum=-8.039;QD=17.58;ReadPosRankSum=1.288;VQSLOD=1.3715;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:15.03:0,15,174	0/1:5,0:5:61.35:68,0,61	./.	./.	0/0:10,0:10:21.07:0,21,439	1/1:8,4:12:30.10:498,30,0	0/1:2,0:2:24.49:34,0,24	1/1:23,0:21:45.10:578,45,0	0/0:4,0:4:6.02:0,6,90	1/1:9,0:8:10.80:265,11,0	0/1:10,0:10:24.45:141,0,24	0/0:4,0:4:9.03:0,9,197	0/0:7,0:6:15.05:0,15,473	0/0:4,0:4:9.01:0,9,160	0/0:5,0:5:9.03:0,9,190	0/0:6,0:6:12.04:0,12,304	0/1:20,0:15:99:127,0,100	0/1:9,0:7:32.26:102,0,32	0/1:13,0:12:33.57:349,0,34	0/1:8,0:8:57.57:71,0,58	1/1:3,0:3:2.92:17,3,0	1/1:7,0:7:9.03:114,9,0	1/1:8,0:8:12.04:159,12,0	0/0:3,0:3:8.99:0,9,172	0/0:12,0:12:18.05:0,18,376	0/1:10,0:10:99:132,0,182	0/1:10,0:10:74.53:141,0,75	0/0:5,0:4:9.03:0,9,200
chr10	87338135	.	A	AAT	3454.20	PASS	AB=0.975;AC=28;AF=0.538;AN=52;BaseQRankSum=0.352;DP=210;FS=0.652;HRun=0;HaplotypeScore=35.3067;InbreedingCoeff=0.5967;MQ=42.65;MQ0=5;MQRankSum=-7.204;QD=22.43;ReadPosRankSum=0.999;VQSLOD=3.4272;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:8.15:0,8,24	0/1:5,0:5:18.86:69,0,19	./.	./.	0/0:9,0:9:21.07:0,21,317	1/1:12,0:12:10.38:253,10,0	0/1:2,0:2:1.06:35,0,1	1/1:27,0:25:60.11:756,60,0	0/0:4,0:4:6.02:0,6,90	1/1:9,0:9:12.70:266,13,0	1/1:8,0:8:3.89:147,4,0	0/0:3,0:3:9.03:0,9,136	0/0:6,0:6:15.05:0,15,229	0/0:4,0:4:9.01:0,9,99	0/0:4,0:4:9.03:0,9,136	0/0:5,0:5:12.04:0,12,182	0/1:20,0:15:14.40:190,0,14	0/1:8,1:7:3.19:105,0,3	1/1:13,1:12:33.10:438,33,0	1/1:7,1:8:12.02:161,12,0	1/1:2,0:2:2.92:17,3,0	1/1:7,0:7:9.03:114,9,0	1/1:7,0:7:12.04:159,12,0	0/0:3,0:3:8.99:0,9,111	0/0:12,0:12:17.49:0,17,254	1/1:6,3:9:23.61:297,24,0	1/1:9,1:9:21.06:280,21,0	1/1:1,4:4:9.03:168,9,0
chr10	87338484	.	AAG	A	2524.19	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.206;DP=549;FS=7.043;HRun=0;HaplotypeScore=87.2840;InbreedingCoeff=0.9906;MQ=97.66;MQ0=0;MQRankSum=-0.778;QD=32.36;ReadPosRankSum=1.259;VQSLOD=5.8981;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.30:0,87,1537	0/0:6,0:6:15.05:0,15,252	0/0:35,0:34:31:0,31,902	0/0:40,0:39:66.14:0,66,1203	0/0:20,0:19:54.18:0,54,955	1/1:2,23:25:66.22:924,66,0	1/1:2,28:30:69.23:962,69,0	0/0:32,0:32:78.27:0,78,1401	0/0:16,0:16:48.16:0,48,848	0/0:19,0:19:54.17:0,54,914	0/0:7,0:7:18.06:0,18,307	0/0:26,0:26:69.24:0,69,1209	0/0:12,0:12:30.10:0,30,540	0/0:13,0:13:39.13:0,39,686	0/0:23,0:23:66.23:0,66,1161	0/0:16,0:16:45.15:0,45,778	0/0:15,0:15:39.13:0,39,669	0/0:13,0:13:39.13:0,39,687	0/0:26,0:26:72.25:0,72,1279	0/0:8,0:8:24.08:0,24,432	0/0:32,0:32:90.31:0,90,1586	1/1:1,11:12:24.08:336,24,0	1/1:0,11:11:33.11:462,33,0	0/0:29,0:29:75.26:0,75,1350	0/0:9,0:9:21.07:0,21,352	0/0:18,0:18:51.16:0,51,890	0/0:13,0:12:39.13:0,39,702	0/0:11,0:11:33.11:0,33,561
chr10	87338583	.	ACGCG	A	3120.62	PASS	AB=0.909;AC=31;AF=0.596;AN=52;BaseQRankSum=7.929;DP=321;FS=24.076;HRun=0;HaplotypeScore=66.2038;InbreedingCoeff=0.8006;MQ=52.51;MQ0=25;MQRankSum=-1.849;QD=20.53;ReadPosRankSum=-4.817;VQSLOD=0.4628;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:11.88:211,12,0	1/1:4,0:3:3.01:45,3,0	0/0:8,0:6:13.95:0,14,202	0/1:9,1:5:28.78:29,0,37	0/0:8,0:8:11.96:0,12,198	1/1:18,0:18:32.97:528,33,0	1/1:17,0:13:24.03:350,24,0	1/1:5,0:2:6.01:59,6,0	0/0:21,0:17:33.11:0,33,527	1/1:8,0:6:14.98:184,15,0	1/1:5,0:5:12.04:190,12,0	0/0:22,0:19:32.30:0,32,511	0/0:10,0:10:23.97:0,24,343	0/0:13,0:13:26.51:0,27,569	0/0:11,0:11:27.09:0,27,517	0/0:12,0:12:27.07:0,27,533	1/1:11,0:11:21.52:286,22,0	1/1:9,0:8:21.94:307,22,0	1/1:2,0:1:0.89:2,1,0	./.	1/1:21,0:20:30.57:490,31,0	./.	1/1:0,8:8:0.89:2,1,0	0/0:32,0:32:67.77:0,68,1371	0/0:15,0:14:27.09:0,27,571	1/1:9,0:6:15.03:210,15,0	1/1:6,0:6:15.04:200,15,0	1/1:6,0:5:15.05:228,15,0
chr10	87338745	.	CTT	C	2656.01	PASS	AB=0.678;AC=28;AF=0.500;AN=56;BaseQRankSum=7.344;DP=441;FS=0.000;HRun=15;HaplotypeScore=75.1634;InbreedingCoeff=0.6820;MQ=75.45;MQ0=1;MQRankSum=-1.984;QD=10.71;ReadPosRankSum=3.266;VQSLOD=2.5022;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,17:24:52.73:429,53,0	1/1:0,2:2:3:26,3,0	0/1:18,0:13:4.41:4,0,113	0/0:17,0:15:10.57:0,11,64	0/0:17,0:19:44.60:0,45,532	0/0:4,0:15:22.46:0,22,78	0/1:9,2:18:21.53:22,0,86	1/1:10,15:30:44.21:413,44,0	0/0:15,0:15:33.03:0,33,386	1/1:12,8:21:12.70:167,13,0	1/1:2,1:4:5.71:38,6,0	0/0:21,0:21:47.99:0,48,550	0/0:13,0:13:18.03:0,18,210	0/0:15,0:15:33.05:0,33,384	0/0:18,0:18:48.01:0,48,574	0/0:11,0:11:29.56:0,30,343	1/1:5,14:19:13.39:174,13,0	1/1:5,15:21:20.11:322,20,0	1/1:7,9:18:26.32:243,26,0	1/1:2,12:15:35.94:317,36,0	0/1:1,5:6:8.29:91,0,8	0/1:0,2:8:12.99:13,0,32	0/0:3,0:11:16.73:0,17,83	0/0:15,0:16:35.60:0,36,457	0/0:19,0:20:38.49:0,38,455	1/1:5,10:18:21.42:265,21,0	1/1:4,12:17:29.92:264,30,0	1/1:1,6:7:8.93:79,9,0
chr10	87339008	.	TTTTGTTG	T	6970.56	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=12.338;DP=349;FS=15.494;HRun=0;HaplotypeScore=95.0109;InbreedingCoeff=0.8720;MQ=65.02;MQ0=2;MQRankSum=-10.159;QD=41.00;ReadPosRankSum=2.924;VQSLOD=3.5718;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:27.04:589,27,0	1/1:0,2:2:6.02:154,6,0	0/0:19,0:13:35.70:0,36,1031	0/0:22,0:18:19.73:0,20,1066	0/0:17,0:17:51.17:0,51,1730	1/1:1,14:14:24.08:615,24,0	1/1:2,7:9:2.96:20,3,0	1/1:3,9:12:27.05:389,27,0	0/0:17,0:17:51.17:0,51,1853	1/1:0,17:17:45.15:1043,45,0	1/1:0,4:4:12.04:307,12,0	0/0:23,0:23:66.23:0,66,2394	0/0:15,0:15:42.14:0,42,1456	0/0:11,0:11:30.10:0,30,961	0/0:14,0:14:39.13:0,39,1149	0/0:21,0:21:60.20:0,60,1884	1/1:0,16:16:21.07:538,21,0	1/1:2,7:9:6.02:154,6,0	1/1:0,14:14:42.06:652,42,0	1/1:0,5:5:6.02:154,6,0	1/1:0,4:4:3.01:32,3,0	1/1:0,1:1:3.01:77,3,0	1/1:0,8:8:18.06:461,18,0	0/0:9,0:9:26.88:0,27,831	0/0:11,0:11:30.10:0,30,1167	1/1:0,17:17:45.10:940,45,0	1/1:1,10:11:17.99:460,18,0	1/1:0,7:7:15.05:385,15,0
chr10	87339070	.	TGTTG	T	511.69	PASS	AB=0.955;AC=15;AF=0.278;AN=54;BaseQRankSum=7.602;DP=347;FS=53.138;HRun=0;HaplotypeScore=103.1347;InbreedingCoeff=-0.2360;MQ=54.11;MQ0=9;MQRankSum=-7.947;QD=3.43;ReadPosRankSum=-2.731;VQSLOD=-0.5123;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,1:12:23.74:24,0,198	0/1:3,0:2:11.02:11,0,12	0/0:21,0:9:17.96:0,18,430	0/1:33,0:9:15:15,0,142	0/0:21,0:21:63.20:0,63,1582	0/1:14,0:14:99:128,0,193	0/1:10,0:11:55.98:56,0,71	0/0:24,0:21:3.64:0,4,484	0/0:12,0:12:36.11:0,36,865	0/1:8,0:7:28.71:59,0,29	0/1:6,0:6:30.24:47,0,30	0/0:16,0:16:42.13:0,42,1001	0/0:15,0:15:42.14:0,42,1006	0/0:7,0:7:21.05:0,21,497	0/0:18,0:18:51.17:0,51,1259	0/0:22,0:22:60.21:0,60,1520	0/1:9,0:10:32.75:48,0,33	0/1:9,0:9:18.17:18,0,26	0/0:15,0:10:8.71:0,9,346	1/1:2,0:2:5.81:52,6,0	./.	0/1:2,0:2:6.92:7,0,35	0/1:5,2:7:68.81:69,0,80	0/0:13,0:13:34.70:0,35,892	0/0:10,0:10:30.09:0,30,667	0/1:13,0:12:40.32:40,0,155	0/1:14,1:13:90.79:91,0,259	0/0:3,0:3:6.02:0,6,85
chr10	87339078	.	TG	T	1388.40	PASS	AB=1.000;AC=27;AF=0.519;AN=52;BaseQRankSum=9.662;DP=307;FS=5.006;HRun=1;HaplotypeScore=75.0831;InbreedingCoeff=0.8005;MQ=57.04;MQ0=10;MQRankSum=-9.853;QD=10.85;ReadPosRankSum=-3.832;VQSLOD=0.2163;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:13:20.77:140,21,0	0/0:2,0:1:1.82:0,2,5	0/0:21,0:9:17.93:0,18,236	0/0:33,1:9:7.98:0,8,87	0/0:19,0:19:57.19:0,57,814	1/1:13,1:14:22.05:183,22,0	1/1:11,0:11:10.72:103,11,0	1/1:17,0:16:38.32:297,38,0	0/0:12,0:12:36.10:0,36,494	1/1:6,0:5:8.95:74,9,0	1/1:4,0:4:11.27:80,11,0	0/0:12,0:12:36.12:0,36,513	0/0:12,0:12:36.11:0,36,495	0/0:7,0:7:21.06:0,21,282	0/0:17,0:17:48.16:0,48,686	0/0:20,0:20:54.15:0,54,734	1/1:9,0:8:15.57:82,16,0	1/1:6,0:6:6.84:46,7,0	1/1:11,0:7:17.91:136,18,0	1/1:3,0:2:4.61:18,5,0	./.	1/1:1,1:2:2.98:23,3,0	0/1:5,0:5:22.17:47,0,22	0/0:13,1:14:32.63:0,33,508	0/0:8,0:8:24.06:0,24,324	1/1:8,2:8:20.77:150,21,0	1/1:14,2:15:18.90:213,19,0	./.
chr10	87339084	.	TG	T	1356.06	PASS	AB=0.800;AC=27;AF=0.519;AN=52;BaseQRankSum=10.902;DP=311;FS=13.426;HRun=1;HaplotypeScore=74.5752;InbreedingCoeff=0.7660;MQ=59.58;MQ0=9;MQRankSum=-8.819;QD=11.02;ReadPosRankSum=-3.402;VQSLOD=-0.2125;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:10:20.78:142,21,0	0/0:2,0:1:2.50:0,2,9	0/0:22,1:11:14.90:0,15,292	0/0:33,5:13:4.80:0,5,164	0/0:20,0:20:60.20:0,60,836	1/1:9,5:14:31.58:240,32,0	1/1:13,1:14:24.29:183,24,0	1/1:13,0:12:25:188,25,0	0/0:15,0:15:45.09:0,45,557	1/1:8,0:7:12.06:75,12,0	1/1:5,0:5:3.81:58,4,0	0/0:12,0:12:36.09:0,36,462	0/0:12,0:12:33.10:0,33,449	0/0:8,0:8:24.04:0,24,284	0/0:16,0:16:48.12:0,48,647	0/0:19,0:19:51.14:0,51,676	1/1:8,1:8:1.17:35,1,0	1/1:6,0:6:6.86:47,7,0	1/1:7,0:5:12.43:95,12,0	1/1:2,1:2:5.80:40,6,0	./.	1/1:1,0:2:2.97:21,3,0	0/1:3,1:4:7.08:28,0,7	0/0:15,0:15:38.77:0,39,518	0/0:7,0:7:21.07:0,21,292	1/1:8,2:8:20.84:157,21,0	1/1:15,1:15:27.70:243,28,0	./.
chr10	87339090	.	TG	T	1387.36	PASS	AB=0.900;AC=30;AF=0.556;AN=54;BaseQRankSum=10.654;DP=309;FS=13.344;HRun=1;HaplotypeScore=72.4240;InbreedingCoeff=0.7290;MQ=63.54;MQ0=8;MQRankSum=-9.407;QD=8.89;ReadPosRankSum=-3.130;VQSLOD=-0.7496;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:10:17.81:123,18,0	0/0:1,0:1:2.37:0,2,8	0/0:27,0:15:34.15:0,34,390	0/1:33,0:13:20.91:21,0,189	0/0:21,0:21:63.14:0,63,838	1/1:9,4:14:31.11:235,31,0	1/1:14,0:14:24.28:181,24,0	1/1:12,0:11:16:106,16,0	0/0:17,0:17:51.11:0,51,654	1/1:8,0:8:16.17:119,16,0	1/1:3,2:5:6.71:67,7,0	0/0:10,0:10:27.08:0,27,376	0/0:12,0:12:36.10:0,36,475	0/0:7,0:7:21.04:0,21,258	0/0:15,0:15:45.14:0,45,611	0/0:21,0:21:57.12:0,57,722	1/1:8,1:8:4.82:48,5,0	1/1:3,0:3:5.97:44,6,0	1/1:9,0:7:15.86:116,16,0	1/1:3,0:2:5.80:40,6,0	./.	1/1:2,0:2:2.97:21,3,0	0/1:3,1:4:7.11:28,0,7	0/0:15,0:15:40.93:0,41,529	0/0:6,0:6:18.06:0,18,251	1/1:9,1:8:20.83:154,21,0	1/1:15,0:14:27.80:247,28,0	1/1:3,0:3:6.80:41,7,0
chr10	87339096	.	TG	T	1355.62	PASS	AB=0.857;AC=27;AF=0.519;AN=52;BaseQRankSum=10.547;DP=289;FS=22.525;HRun=1;HaplotypeScore=72.9476;InbreedingCoeff=0.7833;MQ=70.53;MQ0=7;MQRankSum=-7.936;QD=12.21;ReadPosRankSum=-3.717;VQSLOD=0.1147;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:9:23.75:161,24,0	0/0:1,0:1:2.22:0,2,7	0/0:25,0:15:7.85:0,8,304	0/0:31,0:14:2.89:0,3,166	0/0:20,0:20:60.13:0,60,733	1/1:13,1:14:31.88:250,32,0	1/1:12,0:12:24.29:185,24,0	1/1:9,0:9:7.91:58,8,0	0/0:17,0:17:51.12:0,51,631	1/1:8,0:8:16.49:121,16,0	1/1:4,1:5:7.51:74,8,0	0/0:9,0:9:27.06:0,27,326	0/0:12,0:12:36.03:0,36,409	0/0:6,0:6:18.06:0,18,239	0/0:15,0:15:45.10:0,45,549	0/0:20,0:20:54.11:0,54,694	1/1:7,0:6:2.96:33,3,0	./.	1/1:8,0:7:15.85:115,16,0	1/1:2,0:2:5.80:40,6,0	./.	1/1:1,0:1:2.98:22,3,0	0/1:5,1:6:0.84:55,0,1	0/0:15,0:15:36:0,36,453	0/0:6,0:6:17.95:0,18,215	1/1:10,1:9:17.32:161,17,0	1/1:14,0:13:28.05:235,28,0	1/1:3,0:3:6.80:41,7,0
chr10	87339293	.	ATC	A	84.33	PASS	AB=0.768;AC=7;AF=0.135;AN=52;BaseQRankSum=3.924;DP=184;FS=10.960;HRun=0;HaplotypeScore=38.8800;InbreedingCoeff=-0.0001;MQ=54.36;MQ0=0;MQRankSum=-3.616;QD=1.92;ReadPosRankSum=-1.778;VQSLOD=-0.5596;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:18.06:0,18,346	0/0:3,0:3:9.03:0,9,174	1/1:1,0:1:2.22:7,2,0	0/0:3,0:2:2.88:0,3,42	0/0:6,0:6:18.06:0,18,348	0/0:14,0:13:11.01:0,11,524	0/1:3,1:3:31.72:32,0,141	0/1:24,4:25:21.64:22,0,1056	0/0:8,0:8:21.07:0,21,406	0/0:7,0:7:15.52:0,16,282	0/1:1,1:2:18.98:38,0,19	0/0:3,0:3:9.03:0,9,174	0/0:6,0:6:18.06:0,18,348	0/0:5,0:5:15.05:0,15,290	0/0:7,0:7:18.06:0,18,348	0/0:8,0:8:21.07:0,21,405	0/0:11,0:11:27.09:0,27,511	0/0:10,0:9:21.07:0,21,366	0/0:10,0:10:27.08:0,27,453	0/0:3,0:3:9.02:0,9,141	0/1:2,1:3:37.48:37,0,52	./.	./.	0/0:1,0:1:2.97:0,3,20	0/0:8,0:8:24.08:0,24,464	0/1:4,2:6:67.23:67,0,156	0/0:6,0:5:12.04:0,12,217	0/0:14,0:14:36.74:0,37,649
chr10	87339297	.	T	TAATAAATAAATA	4436.10	PASS	AC=26;AF=0.565;AN=46;BaseQRankSum=2.336;DP=187;FS=27.902;HRun=0;HaplotypeScore=67.6274;InbreedingCoeff=0.7056;MQ=54.41;MQ0=0;MQRankSum=-5.540;QD=34.39;ReadPosRankSum=-3.521;VQSLOD=1.6103;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:5.99:90,6,0	./.	0/0:1,0:1:2.60:0,3,10	0/0:2,0:2:2.49:0,2,19	0/0:6,0:6:18.06:0,18,635	1/1:8,0:13:12.04:630,12,0	1/1:4,0:3:3.01:103,3,0	1/1:28,0:25:18.05:507,18,0	0/0:8,0:8:9.02:0,9,239	1/1:4,0:6:9.03:227,9,0	1/1:1,0:1:3.01:75,3,0	0/0:3,0:3:3.01:0,3,106	0/0:6,0:6:12.04:0,12,344	0/0:5,0:5:12.04:0,12,423	0/0:6,0:6:18.06:0,18,635	0/0:7,0:7:15.05:0,15,498	1/1:9,0:12:6.02:154,6,0	1/1:7,0:14:12.04:309,12,0	1/1:6,2:11:18.03:678,18,0	./.	1/1:3,0:3:6.02:343,6,0	./.	./.	./.	0/0:8,0:8:15.04:0,15,449	1/1:6,0:6:9.03:257,9,0	1/1:3,2:5:3.01:178,3,0	1/1:9,5:14:15.05:887,15,0
chr10	87339545	.	CT	C	7352.03	PASS	AB=1.000;AC=33;AF=0.611;AN=54;BaseQRankSum=11.643;DP=358;FS=0.942;HRun=4;HaplotypeScore=58.3777;InbreedingCoeff=0.8790;MQ=65.02;MQ0=1;MQRankSum=0.594;QD=28.83;ReadPosRankSum=0.402;VQSLOD=4.2445;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,43:45:99:1296,110,0	1/1:0,1:1:3.01:36,3,0	0/0:10,0:9:23.41:0,23,231	0/1:8,0:7:1.98:2,0,93	0/0:5,0:5:12.04:0,12,168	1/1:0,16:16:42.13:501,42,0	1/1:3,13:16:30.06:345,30,0	1/1:1,21:22:63.15:710,63,0	0/0:10,0:10:24.05:0,24,298	1/1:0,12:12:36.09:410,36,0	1/1:0,4:4:8.94:88,9,0	0/0:16,0:16:48.15:0,48,653	0/0:5,0:5:15.04:0,15,193	0/0:14,0:14:42.10:0,42,537	0/0:10,0:10:27.08:0,27,358	0/0:11,0:11:27.09:0,27,377	1/1:0,19:19:45.14:539,45,0	1/1:0,22:22:57.17:682,57,0	1/1:0,25:25:65.81:719,66,0	1/1:0,2:2:6.02:71,6,0	1/1:0,21:21:57.14:668,57,0	./.	1/1:0,3:3:5.99:71,6,0	0/0:16,0:16:48.14:0,48,638	0/0:6,0:6:18.05:0,18,234	1/1:0,11:11:33.03:355,33,0	1/1:0,9:9:27.08:323,27,0	1/1:1,17:18:45.14:536,45,0
chr10	87339719	.	GATTATTATTATT	G	1014.63	PASS	AC=10;AF=0.208;AN=48;BaseQRankSum=3.949;DP=224;FS=4.342;HRun=0;HaplotypeScore=81.0404;InbreedingCoeff=0.6009;MQ=64.15;MQ0=0;MQRankSum=-4.027;QD=25.37;ReadPosRankSum=0.510;VQSLOD=1.9964;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:27.09:0,27,1461	1/1:0,1:1:3.01:98,3,0	./.	0/0:17,0:5:0.47:0,0,1	0/0:7,0:7:9.03:0,9,416	0/0:8,0:11:21.07:0,21,965	0/0:2,0:2:3.01:0,3,176	0/0:35,0:35:54.19:0,54,2194	0/0:3,0:3:3.01:0,3,176	1/1:5,1:6:3.01:104,3,0	1/1:5,2:7:6.02:196,6,0	0/0:5,0:5:6.02:0,6,352	0/0:5,0:5:9.03:0,9,526	0/0:5,0:5:15.05:0,15,687	0/0:4,0:4:6.02:0,6,352	0/0:6,0:6:6.02:0,6,306	1/1:10,5:15:9.03:299,9,0	1/1:7,4:11:15.05:454,15,0	0/0:14,0:15:21.07:0,21,1026	0/0:2,0:2:6.02:0,6,288	./.	./.	./.	0/0:9,0:9:9.03:0,9,418	0/0:11,0:11:21.07:0,21,1198	0/0:4,0:4:6.02:0,6,214	0/0:9,0:9:18.06:0,18,679	0/0:5,0:6:6.02:0,6,299
chr10	87339788	.	T	TGTCCC	15466.53	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=1.416;DP=336;FS=10.497;HRun=0;HaplotypeScore=75.5876;InbreedingCoeff=0.9700;MQ=92.31;MQ0=0;MQRankSum=-14.129;QD=75.08;ReadPosRankSum=-1.621;VQSLOD=5.4538;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,12:21:45.15:1279,45,0	1/1:1,11:12:36.12:1108,36,0	0/0:20,0:20:48.16:0,48,976	0/0:19,0:18:54.17:0,54,1033	0/0:8,0:8:24.08:0,24,504	1/1:3,8:11:30.10:923,30,0	1/1:2,7:8:24.08:705,24,0	1/1:8,22:31:90.29:2554,90,0	0/0:13,0:13:39.12:0,39,779	1/1:0,10:11:33.11:973,33,0	1/1:4,4:10:18.06:542,18,0	0/0:8,0:8:24.08:0,24,492	0/0:15,0:15:45.15:0,45,945	0/0:8,0:8:21.07:0,21,441	0/0:11,0:11:33.10:0,33,643	0/0:7,0:7:21.07:0,21,441	1/1:3,16:19:45.15:1385,45,0	1/1:3,9:12:27.09:835,27,0	1/1:3,10:14:36.12:1101,36,0	1/1:2,7:9:24.08:738,24,0	1/1:2,5:7:12.04:363,12,0	1/1:0,5:5:12.04:348,12,0	1/1:0,5:5:15.05:463,15,0	0/0:12,0:12:36.12:0,36,756	0/0:9,0:9:27.07:0,27,527	1/1:2,12:14:36.09:1040,36,0	1/1:3,9:11:30.10:924,30,0	1/1:1,2:3:6.02:185,6,0
chr10	87340325	.	C	CT	4540.71	PASS	AB=0.756;AC=33;AF=0.589;AN=56;BaseQRankSum=-2.650;DP=470;FS=0.000;HRun=11;HaplotypeScore=70.6227;InbreedingCoeff=0.6590;MQ=76.35;MQ0=1;MQRankSum=-2.850;QD=14.23;ReadPosRankSum=-1.927;VQSLOD=4.5862;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:23:28.12:138,28,0	1/1:1,7:8:21.04:213,21,0	0/0:19,0:17:12.02:0,12,158	0/0:13,0:14:18.95:0,19,127	0/0:20,0:22:34.81:0,35,261	1/1:5,0:13:22.97:126,23,0	1/1:4,0:13:22.88:120,23,0	1/1:12,24:39:19.51:663,20,0	0/0:13,0:13:29.86:0,30,232	0/1:16,8:23:12.18:237,0,12	1/1:2,12:14:32.99:313,33,0	0/0:14,0:15:27.45:0,27,229	0/0:15,0:15:32.83:0,33,253	0/0:15,1:16:5.58:0,6,225	0/1:7,1:8:15.52:16,0,78	0/0:15,0:15:29.84:0,30,232	1/1:4,14:19:27.70:441,28,0	1/1:1,10:11:30.06:303,30,0	0/1:10,12:22:23.82:220,0,24	1/1:0,6:7:17.87:167,18,0	1/1:3,10:12:18.51:183,19,0	1/1:5,0:12:25.24:129,25,0	1/1:7,0:14:21.72:107,22,0	0/0:21,1:22:20.35:0,20,341	0/1:9,1:11:4.51:5,0,142	1/1:7,14:21:33.01:313,33,0	0/1:9,23:33:0.73:521,0,1	1/1:1,12:14:15.67:326,16,0
chr10	87340441	.	CTTAG	C	10911.59	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=10.807;DP=368;FS=17.636;HRun=0;HaplotypeScore=67.7195;InbreedingCoeff=0.9731;MQ=90.05;MQ0=0;MQRankSum=-5.400;QD=45.28;ReadPosRankSum=2.320;VQSLOD=4.0786;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:39.13:728,39,0	1/1:0,8:8:15.05:280,15,0	0/0:14,0:14:36.12:0,36,925	0/0:17,0:17:38.85:0,39,949	0/0:15,0:15:42.14:0,42,1036	1/1:1,8:8:21.07:392,21,0	1/1:0,6:5:12.04:224,12,0	1/1:5,24:29:72.25:1307,72,0	0/0:9,0:9:21.07:0,21,553	1/1:1,15:16:45.15:829,45,0	1/1:1,16:17:42.06:722,42,0	0/0:13,0:13:36.11:0,36,904	0/0:11,0:11:30.10:0,30,772	0/0:10,0:10:30.09:0,30,743	0/0:10,0:10:24.08:0,24,611	0/0:7,0:7:21.07:0,21,560	1/1:2,21:23:51.17:952,51,0	1/1:0,20:20:57.20:1064,57,0	1/1:1,15:16:45.14:810,45,0	1/1:0,18:18:51.11:894,51,0	1/1:1,10:11:24.08:448,24,0	1/1:1,3:4:6.02:112,6,0	1/1:0,9:9:24.08:406,24,0	0/0:11,0:11:27.07:0,27,655	0/0:10,0:10:30.10:0,30,799	1/1:2,17:19:51.15:907,51,0	1/1:0,10:10:30.10:560,30,0	1/1:3,6:9:15.05:280,15,0
chr10	87340594	.	T	TGG	90.24	PASS	AB=0.993;AC=6;AF=0.115;AN=52;BaseQRankSum=2.199;DP=539;FS=15.176;HRun=0;HaplotypeScore=57.1155;InbreedingCoeff=0.1172;MQ=29.67;MQ0=234;MQRankSum=-0.747;QD=0.68;ReadPosRankSum=0.195;VQSLOD=-0.3742;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:20:42.91:0,43,396	0/1:8,0:5:1.29:1,0,44	./.	./.	0/0:26,0:20:53.94:0,54,616	0/0:14,0:9:7.62:0,8,180	0/0:19,0:11:18.43:0,18,200	0/1:26,0:9:34.07:34,0,57	0/0:12,0:8:18.03:0,18,192	0/0:27,0:16:38.56:0,39,406	0/0:25,0:17:34:0,34,291	0/0:16,0:9:6.02:0,6,66	0/0:8,0:6:17.99:0,18,219	0/0:13,0:5:12.03:0,12,135	0/0:11,0:6:15.04:0,15,181	0/0:10,0:4:5.67:0,6,36	0/0:32,0:19:35.20:0,35,306	0/0:24,0:9:17.61:0,18,197	0/1:71,2:17:53.34:53,0,183	0/1:13,0:9:21.75:22,0,47	0/0:13,0:4:5.81:0,6,49	0/0:4,0:2:4.19:0,4,13	1/1:12,1:7:9.56:94,10,0	0/0:12,0:4:2.89:0,3,28	0/0:18,0:10:15.05:0,15,183	0/0:32,0:13:16.66:0,17,163	0/0:21,1:9:1.17:0,1,77	0/0:22,0:7:11.61:0,12,92
chr10	87341362	.	A	AAAAC	13305.73	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=11.234;DP=616;FS=0.000;HRun=0;HaplotypeScore=117.7364;InbreedingCoeff=0.7662;MQ=66.07;MQ0=2;MQRankSum=-0.801;QD=33.52;ReadPosRankSum=-0.241;VQSLOD=4.8311;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,21:32:51.17:1229,51,0	1/1:3,9:12:24.08:579,24,0	0/0:17,0:13:3.01:0,3,30	0/0:10,0:10:15.02:0,15,217	0/0:42,0:42:99:0,102,1634	0/1:17,0:17:18.66:58,0,19	1/1:14,0:14:7.59:37,8,0	1/1:25,12:42:53.95:830,54,0	0/0:16,0:16:42.14:0,42,680	1/1:11,24:35:72.24:1680,72,0	1/1:6,23:30:63.15:1416,63,0	0/0:15,0:15:39.12:0,39,610	0/0:18,0:18:42.12:0,42,657	0/0:19,0:19:45.14:0,45,707	0/0:26,0:26:69.24:0,69,1121	0/0:13,0:13:27.09:0,27,440	1/1:6,18:24:45.15:1083,45,0	1/1:5,7:12:9.03:217,9,0	1/1:7,11:17:10.24:529,10,0	1/1:9,21:31:57.14:1320,57,0	1/1:3,6:9:15.05:362,15,0	1/1:15,0:15:0.13:30,0,0	0/1:32,0:32:22.74:97,0,23	0/0:15,0:15:30.10:0,30,488	0/0:27,0:27:69.20:0,69,1035	1/1:4,28:33:87.24:1963,87,0	1/1:9,17:28:45.63:1082,46,0	1/1:1,10:11:33.11:794,33,0
chr10	87341378	.	C	CAA	3931.83	PASS	AB=0.996;AC=20;AF=0.357;AN=56;BaseQRankSum=18.965;DP=630;FS=7.213;HRun=3;HaplotypeScore=133.7826;InbreedingCoeff=0.0530;MQ=63.50;MQ0=2;MQRankSum=-3.515;QD=10.57;ReadPosRankSum=9.220;VQSLOD=-0.4701;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:99:192,0,185	0/1:15,0:15:85.21:85,0,152	0/0:14,0:9:17.78:0,18,228	0/0:13,0:12:25.32:0,25,331	0/0:41,0:41:99:0,120,1659	1/1:3,12:19:44.99:592,45,0	1/1:3,7:10:23.52:370,24,0	0/0:36,0:35:5.11:0,5,900	0/0:16,0:16:48.16:0,48,670	0/1:37,0:37:99:236,0,337	0/1:34,0:34:99:199,0,273	0/0:15,0:15:45.13:0,45,611	0/0:21,0:21:63.19:0,63,856	0/0:19,0:19:51.17:0,51,713	0/0:25,0:25:72.24:0,72,1007	0/0:11,0:11:30.10:0,30,420	0/1:24,0:24:99:174,0,151	0/1:10,0:10:31.49:31,0,65	0/1:21,0:20:15.99:16,0,482	0/1:30,0:30:99:202,0,207	0/1:11,0:11:50.66:51,0,122	1/1:6,7:13:30.55:476,31,0	1/1:12,19:31:46.46:725,46,0	0/0:17,0:17:45.11:0,45,593	0/0:30,0:30:87.28:0,87,1197	0/1:34,0:34:99:297,0,189	0/1:30,0:30:99:159,0,261	0/1:17,0:18:99:127,0,179
chr10	87342937	.	GA	G	2717.39	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.166;DP=598;FS=2.037;HRun=4;HaplotypeScore=61.8431;InbreedingCoeff=0.9993;MQ=83.87;MQ0=0;MQRankSum=0.359;QD=28.01;ReadPosRankSum=0.785;VQSLOD=3.3286;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,1511	0/0:8,0:8:24.08:0,24,336	0/0:20,0:20:46.70:0,47,619	0/0:17,0:17:38.23:0,38,478	0/0:34,0:34:99:0,102,1397	1/1:0,26:26:66.20:791,66,0	1/1:0,28:28:63.19:756,63,0	0/0:24,0:24:66.20:0,66,905	0/0:16,0:16:42.14:0,42,588	0/0:23,0:23:66.14:0,66,899	0/0:21,0:21:63.18:0,63,836	0/0:20,0:20:51.16:0,51,696	0/0:19,0:19:54.10:0,54,740	0/0:18,0:18:51.17:0,51,714	0/0:12,0:12:36.06:0,36,450	0/0:20,0:20:57.18:0,57,783	0/0:33,0:33:93.21:0,93,1259	0/0:21,0:21:63.21:0,63,878	0/0:18,0:17:51.11:0,51,673	0/0:23,0:23:69.21:0,69,933	0/0:17,0:17:48.16:0,48,670	1/1:0,16:16:39.12:468,39,0	1/1:2,25:27:72.17:863,72,0	0/0:27,0:27:75.21:0,75,1028	0/0:19,0:19:57.19:0,57,794	0/0:23,0:23:66.21:0,66,909	0/0:17,0:16:48.16:0,48,671	0/0:12,0:12:33.11:0,33,462
chr10	87343044	.	CTTT	C	2735.06	PASS	AB=0.589;AC=23;AF=0.426;AN=54;BaseQRankSum=2.856;DP=468;FS=5.152;HRun=16;HaplotypeScore=85.2805;InbreedingCoeff=0.7751;MQ=57.72;MQ0=2;MQRankSum=0.757;QD=10.81;ReadPosRankSum=5.459;VQSLOD=0.5983;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,27:35:62.73:675,63,0	1/1:4,1:13:21.16:150,21,0	./.	0/0:7,0:4:6:0,6,53	0/0:24,0:26:55.88:0,56,570	1/1:3,18:24:47.78:514,48,0	1/1:3,16:20:29.95:308,30,0	0/1:9,1:20:26.91:32,0,27	0/0:9,0:10:22.58:0,23,289	1/1:3,2:14:32.41:222,32,0	1/1:7,0:25:37.52:258,38,0	0/0:14,0:15:31.16:0,31,382	0/0:11,0:10:20.81:0,21,303	0/0:12,0:12:29.96:0,30,392	0/0:11,0:11:26.96:0,27,353	0/0:18,0:18:39.08:0,39,604	1/1:6,0:34:19.77:336,20,0	1/1:7,0:16:20.49:123,20,0	0/0:17,0:22:24.82:0,25,151	0/0:4,0:10:12.17:0,12,56	0/0:2,0:7:7.94:0,8,30	1/1:6,7:13:7.53:161,8,0	1/1:4,8:13:10.52:127,11,0	0/0:24,0:25:41.88:0,42,498	0/0:16,0:18:36.86:0,37,442	0/0:5,1:16:15.94:0,16,68	0/1:7,1:18:6.90:33,0,7	0/1:0,0:4:2.10:2,0,2
chr10	87343320	.	AG	A	1649.95	PASS	AB=0.876;AC=26;AF=0.464;AN=56;BaseQRankSum=5.432;DP=474;FS=3.967;HRun=11;HaplotypeScore=61.4885;InbreedingCoeff=-0.0489;MQ=75.48;MQ0=2;MQRankSum=0.226;QD=4.85;ReadPosRankSum=3.116;VQSLOD=1.0345;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:29:42.78:124,43,0	1/1:0,2:3:5.03:31,5,0	0/1:18,0:14:25.49:25,0,75	0/0:16,0:14:8.93:0,9,124	0/1:11,5:16:74.22:78,0,74	0/0:14,0:14:24.04:0,24,247	0/1:33,4:37:23.68:24,0,588	0/0:11,1:12:2.44:0,2,231	0/1:17,1:18:14.39:14,0,241	1/1:9,4:12:14.97:123,15,0	1/1:4,10:16:30.08:214,30,0	0/1:10,1:11:9.62:10,0,99	0/1:11,1:12:3.51:4,0,170	0/1:10,2:12:9.60:10,0,105	0/0:24,2:26:5.24:0,5,427	0/0:16,1:17:5.42:0,5,258	1/1:7,23:32:78.98:627,79,0	1/1:7,8:15:26.96:221,27,0	0/1:10,4:14:71.47:71,0,132	0/1:14,4:18:56.33:56,0,269	0/1:11,7:18:85.64:117,0,86	0/0:18,1:19:2.40:0,2,223	0/1:9,1:10:9.60:10,0,113	0/1:20,3:23:50.99:51,0,306	0/1:9,1:10:4.37:4,0,142	0/1:12,1:14:9.61:10,0,113	0/0:22,2:24:26.49:0,26,486	0/0:6,0:6:12.50:0,13,128
chr10	87344345	.	CT	C	1385.05	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.258;DP=691;FS=4.983;HRun=11;HaplotypeScore=83.4943;InbreedingCoeff=0.8401;MQ=73.13;MQ0=9;MQRankSum=0.051;QD=14.13;ReadPosRankSum=0.878;VQSLOD=4.0694;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,117,1200	0/0:2,0:9:13.94:0,14,71	0/0:49,1:17:2.18:0,2,189	0/0:45,0:24:1.46:0,1,100	0/0:25,0:25:63.15:0,63,664	1/1:6,18:24:18.94:362,19,0	1/1:1,23:24:44.95:370,45,0	0/0:28,0:30:65.50:0,65,669	0/0:22,0:22:48.59:0,49,513	0/0:6,0:28:46.05:0,46,226	0/0:3,0:18:37.52:0,38,191	0/0:11,1:12:8.37:0,8,271	0/0:17,0:17:45.11:0,45,477	0/0:11,2:13:8.44:0,8,295	0/0:21,0:21:51.10:0,51,527	0/0:12,1:13:8.44:0,8,295	0/0:9,0:33:51.13:0,51,256	0/0:5,0:19:24.73:0,25,127	0/0:26,1:28:47.20:0,47,675	0/0:29,1:32:56.21:0,56,763	0/0:23,0:23:48.12:0,48,512	1/1:4,17:22:46.96:375,47,0	1/1:5,23:28:27.77:436,28,0	0/0:25,0:25:63.16:0,63,671	0/0:16,0:17:47.95:0,48,494	0/0:24,0:25:47.32:0,47,667	0/0:29,0:29:78.18:0,78,823	0/0:11,0:11:30.94:0,31,312
chr10	87344627	.	G	GT	976.56	PASS	AB=0.901;AC=24;AF=0.429;AN=56;BaseQRankSum=-2.586;DP=548;FS=0.492;HRun=15;HaplotypeScore=75.6291;InbreedingCoeff=-0.1102;MQ=67.90;MQ0=2;MQRankSum=0.513;QD=2.70;ReadPosRankSum=-2.562;VQSLOD=-0.7051;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:35:10.62:0,11,144	1/1:1,5:6:7.24:53,7,0	0/0:13,0:9:11.42:0,11,60	0/1:8,0:7:7.58:8,0,14	0/1:22,4:27:25.91:26,0,88	0/0:28,0:29:26.37:0,26,217	0/0:16,0:17:31.76:0,32,177	0/0:25,2:28:5.85:0,6,140	0/0:17,0:22:39.79:0,40,218	1/1:13,17:30:23.85:293,24,0	1/1:6,12:22:9.16:124,9,0	0/1:18,1:21:22.89:23,0,76	0/1:22,0:22:0.18:0,0,99	0/1:13,0:13:27.10:27,0,67	0/0:17,0:18:28.18:0,28,166	0/1:8,3:11:18.12:18,0,83	0/1:11,10:21:6.06:172,0,6	1/1:5,18:24:13.45:200,13,0	0/1:17,4:23:41.43:41,0,115	0/1:18,4:27:87.24:92,0,87	0/1:12,1:12:10.67:11,0,57	0/0:23,0:24:30.64:0,31,241	0/1:18,0:19:10.20:10,0,113	0/1:12,1:13:7.65:8,0,72	0/1:12,2:14:7.73:8,0,72	0/1:18,0:19:6.73:7,0,61	0/1:21,0:26:9.32:9,0,141	0/1:2,1:3:16.30:16,0,27
chr10	87344642	.	T	TA	1000.10	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.209;DP=518;FS=5.239;HRun=2;HaplotypeScore=68.0715;InbreedingCoeff=0.8974;MQ=69.88;MQ0=1;MQRankSum=-0.697;QD=11.63;ReadPosRankSum=1.941;VQSLOD=2.1213;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:59.74:0,60,542	0/0:8,0:8:8.55:0,9,71	0/0:14,0:10:19:0,19,152	0/0:5,0:8:1.60:0,2,51	0/0:20,0:20:43.67:0,44,374	1/1:23,2:25:51.07:371,51,0	1/1:13,0:13:21.49:93,21,0	0/0:25,0:25:52.21:0,52,489	0/0:23,0:23:53.86:0,54,540	0/0:20,0:20:25.74:0,26,184	0/0:25,0:25:39.84:0,40,319	0/0:17,0:17:41.70:0,42,378	0/0:20,0:20:41.25:0,41,401	0/0:11,0:11:17.12:0,17,182	0/0:21,0:21:53.98:0,54,533	0/0:14,0:14:24.39:0,24,285	0/0:17,0:17:10.62:0,11,159	0/0:27,0:27:14.73:0,15,161	0/0:22,0:22:53.31:0,53,472	0/0:27,0:27:50.17:0,50,426	0/0:13,0:12:29.82:0,30,292	1/1:21,3:24:35.64:289,36,0	1/1:22,2:24:54.86:406,55,0	0/0:11,0:11:23.84:0,24,253	0/0:12,0:12:29.84:0,30,308	0/0:20,0:20:47.97:0,48,452	0/0:23,0:23:45.77:0,46,454	0/0:6,0:6:11.82:0,12,122
chr10	87346160	.	GA	G	634.43	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.390;DP=581;FS=8.045;HRun=10;HaplotypeScore=74.7059;InbreedingCoeff=0.9329;MQ=64.51;MQ0=6;MQRankSum=-1.116;QD=15.86;ReadPosRankSum=2.559;VQSLOD=3.9006;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,38:40:83.96:729,84,0	0/0:8,0:8:21.06:0,21,232	0/0:27,0:15:24.06:0,24,265	0/0:26,0:10:11.78:0,12,144	0/0:31,0:31:81.22:0,81,896	0/0:14,0:14:39.10:0,39,424	0/0:16,0:16:42.10:0,42,456	0/0:27,1:29:75.04:0,75,809	0/0:10,0:10:24.06:0,24,266	0/0:21,0:21:60.15:0,60,656	0/0:20,0:20:53.96:0,54,563	0/0:23,0:23:66.17:0,66,722	0/0:11,0:11:30.08:0,30,332	0/0:13,0:13:36.08:0,36,385	0/0:8,0:8:24.06:0,24,266	0/0:16,0:16:13.11:0,13,356	0/0:33,3:36:24.07:0,24,932	0/0:34,0:34:90.69:0,91,985	0/0:22,0:21:57.14:0,57,616	0/0:23,0:23:63.13:0,63,683	0/0:24,1:25:49.09:0,49,748	0/0:17,0:17:48.13:0,48,531	0/0:22,0:22:34.31:0,34,605	0/0:18,0:18:49.95:0,50,536	0/0:21,0:21:60.15:0,60,650	0/0:19,0:19:51.13:0,51,554	0/0:21,0:21:54:0,54,571	0/0:9,0:9:24.03:0,24,247
chr10	87346624	.	G	GA	1901.11	PASS	AB=0.785;AC=17;AF=0.304;AN=56;BaseQRankSum=-7.757;DP=514;FS=0.484;HRun=13;HaplotypeScore=70.7584;InbreedingCoeff=0.1548;MQ=89.42;MQ0=3;MQRankSum=0.497;QD=6.74;ReadPosRankSum=-1.817;VQSLOD=2.0517;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,14:22:45.62:259,0,46	0/0:0,0:1:2.04:0,2,6	0/1:47,0:30:3.41:3,0,49	0/0:31,0:19:9.74:0,10,76	0/1:14,3:20:32.75:33,0,214	0/0:14,0:14:23.70:0,24,164	0/0:13,2:15:3.88:0,4,160	0/1:9,11:20:19.50:242,0,19	0/0:18,0:18:30.43:0,30,242	0/0:6,0:20:39.65:0,40,152	0/0:3,0:13:21.29:0,21,74	0/1:12,1:15:5.94:6,0,158	0/0:14,0:16:28.75:0,29,191	0/0:14,0:17:33.82:0,34,217	0/1:9,1:12:8.94:9,0,75	0/0:17,0:17:20.35:0,20,263	0/0:1,0:18:30.55:0,31,89	0/0:4,0:13:24.61:0,25,96	1/1:6,12:21:20.29:330,20,0	0/1:7,15:22:1.14:281,0,1	1/1:2,12:15:26.09:273,26,0	0/1:15,2:20:13.99:14,0,177	0/0:17,0:18:28.73:0,29,188	0/1:19,2:22:1.07:1,0,262	0/0:18,0:21:40.62:0,41,269	1/1:6,16:23:29.66:384,30,0	0/1:5,8:13:11.45:168,0,11	0/1:5,5:10:43.72:66,0,44
chr10	87347694	.	C	CT	2172.18	PASS	AB=0.619;AC=15;AF=0.278;AN=54;BaseQRankSum=-5.649;DP=373;FS=0.658;HRun=7;HaplotypeScore=49.3578;InbreedingCoeff=0.7026;MQ=37.55;MQ0=63;MQRankSum=-1.809;QD=14.20;ReadPosRankSum=-3.030;VQSLOD=2.3645;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,16:25:46.06:524,46,0	0/0:4,0:3:3:0,3,29	./.	0/0:1,0:1:0.89:0,1,2	0/0:15,0:14:24.03:0,24,231	0/0:18,0:15:33.02:0,33,310	0/0:16,0:11:9.99:0,10,155	1/1:9,15:19:39.08:454,39,0	0/0:11,0:8:8.98:0,9,81	0/0:15,0:13:24.02:0,24,225	0/0:16,0:12:21.02:0,21,198	0/0:3,0:3:6:0,6,58	0/0:5,0:5:9.01:0,9,85	0/0:7,0:6:9:0,9,87	0/0:11,0:9:11.97:0,12,116	0/0:8,0:8:18.03:0,18,174	0/0:28,0:21:8.22:0,8,69	0/0:18,0:12:4.89:0,5,53	1/1:14,10:21:1.08:280,1,0	0/1:5,8:12:4.88:229,0,5	1/1:8,1:3:6.02:72,6,0	0/0:6,0:5:6.01:0,6,58	0/0:7,0:5:11.99:0,12,108	0/0:17,0:13:24.04:0,24,232	0/0:12,0:12:26.93:0,27,247	1/1:13,7:15:31.64:355,32,0	1/1:3,10:14:24.07:289,24,0	1/1:9,5:6:12.04:145,12,0
chr10	87349031	.	CACAAACAA	C	2466.59	PASS	AB=0.630;AC=9;AF=0.161;AN=56;BaseQRankSum=8.162;DP=557;FS=10.830;HRun=0;HaplotypeScore=138.0461;InbreedingCoeff=0.8351;MQ=63.79;MQ0=3;MQRankSum=-8.150;QD=26.52;ReadPosRankSum=-0.028;VQSLOD=2.3661;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:81.28:0,81,3309	1/1:3,4:7:12.04:272,12,0	0/0:20,0:15:19.31:0,19,751	0/0:22,0:21:39.08:0,39,1390	0/0:18,0:18:33.11:0,33,1205	0/0:2,0:11:20.95:0,21,171	0/0:8,0:11:11.97:0,12,97	0/0:22,0:22:30.09:0,30,987	0/0:31,0:31:78.27:0,78,3104	1/1:6,10:16:30.09:687,30,0	1/1:7,6:13:12.04:303,12,0	0/0:23,0:23:57.19:0,57,2113	0/0:26,0:26:48.14:0,48,1883	0/0:20,0:20:39.13:0,39,1615	0/0:28,0:28:63.20:0,63,2235	0/0:16,0:16:39.13:0,39,1627	1/1:12,16:28:18.06:465,18,0	0/1:12,17:28:78.64:899,0,79	0/0:18,0:19:30.09:0,30,1076	0/0:12,0:13:30.09:0,30,1138	0/0:33,0:33:78.27:0,78,3171	0/0:7,0:13:20.97:0,21,190	0/0:2,0:9:20.95:0,21,171	0/0:27,0:29:66.19:0,66,2395	0/0:12,0:12:27.09:0,27,1120	0/0:24,0:24:66.22:0,66,2522	0/0:18,0:18:42.14:0,42,1748	0/0:7,0:7:21.07:0,21,876
chr10	87349335	.	C	CTT	9080.02	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=4.119;DP=624;FS=1.027;HRun=5;HaplotypeScore=91.3461;InbreedingCoeff=0.9964;MQ=86.83;MQ0=0;MQRankSum=-2.222;QD=22.53;ReadPosRankSum=0.670;VQSLOD=2.7211;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:43:99:357,101,0	1/1:2,0:8:14.97:53,15,0	0/0:26,0:26:60.16:0,60,744	0/0:16,0:16:39.12:0,39,494	0/0:16,0:16:42.10:0,42,508	1/1:1,0:21:47.41:169,47,0	1/1:1,0:37:87.34:311,87,0	1/1:2,24:27:72.21:1173,72,0	0/0:19,0:19:57.14:0,57,708	1/1:0,0:28:63.81:261,64,0	1/1:0,0:22:54.90:195,55,0	0/0:30,0:30:81.24:0,81,1018	0/0:19,0:19:54.17:0,54,688	0/0:15,0:15:45.14:0,45,570	0/0:27,0:26:78.25:0,78,992	0/0:11,0:11:33.11:0,33,421	1/1:2,0:25:52.28:186,52,0	1/1:2,0:23:47.41:168,47,0	1/1:4,19:24:66.17:1084,66,0	1/1:1,15:16:45.08:711,45,0	1/1:3,26:29:72.25:1259,72,0	1/1:0,0:14:29.94:106,30,0	1/1:1,0:19:37.42:133,37,0	0/0:35,0:35:99:0,102,1296	0/0:7,0:7:18.06:0,18,229	1/1:1,21:23:66.17:1067,66,0	1/1:5,19:25:56.68:953,57,0	1/1:1,18:19:51.17:892,51,0
chr10	87349487	.	A	AG	2723.17	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-8.774;DP=590;FS=0.000;HRun=3;HaplotypeScore=59.4554;InbreedingCoeff=0.9707;MQ=86.86;MQ0=0;MQRankSum=-1.047;QD=34.47;ReadPosRankSum=-0.640;VQSLOD=3.6953;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:95.83:0,96,1151	1/1:0,3:3:9.03:124,9,0	0/0:26,0:26:72.11:0,72,838	0/0:24,0:24:54.07:0,54,587	0/0:13,0:13:39.12:0,39,468	0/0:14,0:14:42.13:0,42,504	0/0:35,0:35:96.29:0,96,1152	0/0:39,0:39:99:0,108,1286	0/0:20,0:20:60.17:0,60,707	1/1:2,13:15:39.13:546,39,0	1/1:1,12:13:30.10:418,30,0	0/0:28,0:27:81.25:0,81,970	0/0:18,0:17:45.12:0,45,528	0/0:20,0:20:54.17:0,54,648	0/0:25,0:25:69.21:0,69,828	0/0:14,0:14:33.10:0,33,396	1/1:2,20:22:54.18:756,54,0	1/1:1,25:26:75.25:1050,75,0	0/0:38,0:38:99:0,105,1250	0/0:23,0:23:69.21:0,69,828	0/0:48,0:48:99:0,135,1620	0/0:6,0:6:18.06:0,18,216	0/0:11,0:11:30.08:0,30,346	0/0:24,0:24:66.20:0,66,792	0/0:12,0:12:36.11:0,36,432	0/0:15,0:15:45.14:0,45,539	0/0:20,0:20:48.14:0,48,576	0/0:3,0:3:9.03:0,9,108
chr10	87350671	.	T	TA	2797.41	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-8.794;DP=626;FS=1.903;HRun=9;HaplotypeScore=62.2155;InbreedingCoeff=0.9940;MQ=79.12;MQ0=0;MQRankSum=-0.353;QD=25.43;ReadPosRankSum=-0.543;VQSLOD=4.1319;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:41:67.22:0,67,197	1/1:2,6:8:18.05:199,18,0	0/0:23,1:22:27.90:0,28,348	0/0:20,0:18:28.40:0,28,223	0/0:34,0:34:92.97:0,93,807	0/0:25,0:25:68.98:0,69,599	0/0:30,0:30:65.97:0,66,573	0/0:18,0:18:41.99:0,42,365	0/0:17,0:17:50.99:0,51,443	1/1:4,22:26:63.17:696,63,0	1/1:5,27:32:72.15:783,72,0	0/0:18,0:18:44.99:0,45,391	0/0:21,0:21:59.99:0,60,521	0/0:20,0:20:50.99:0,51,443	0/0:22,0:22:62.95:0,63,539	0/0:18,0:18:41.97:0,42,365	1/1:1,26:27:72.19:796,72,0	1/1:2,15:17:45.12:498,45,0	0/0:23,0:23:59.98:0,60,521	0/0:25,0:25:59.98:0,60,521	0/0:16,0:16:47.99:0,48,417	0/0:17,0:17:44.97:0,45,391	0/0:25,0:25:65.97:0,66,569	0/0:19,0:19:56.99:0,57,495	0/0:17,0:17:50.99:0,51,443	0/0:33,0:33:86.97:0,87,755	0/0:28,0:28:83.98:0,84,729	0/0:5,0:5:15:0,15,130
chr10	87350962	.	CA	C	2290.07	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=3.808;DP=558;FS=5.938;HRun=8;HaplotypeScore=104.5308;InbreedingCoeff=0.8806;MQ=69.94;MQ0=3;MQRankSum=1.734;QD=16.96;ReadPosRankSum=3.054;VQSLOD=3.3229;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:26.99:322,27,0	0/0:5,0:9:11.36:0,11,57	0/0:17,0:16:33.02:0,33,346	0/0:25,0:17:29.45:0,29,322	0/0:37,0:37:99:0,99,1195	1/1:2,13:15:36.06:348,36,0	1/1:1,14:15:42.07:406,42,0	0/0:19,0:20:17.91:0,18,273	0/0:19,0:19:51.13:0,51,591	0/0:18,0:21:15.74:0,16,195	0/0:23,0:39:59.93:0,60,315	0/0:17,0:17:42.13:0,42,507	0/0:18,0:18:51.15:0,51,606	0/0:14,0:14:42.12:0,42,496	0/0:28,0:28:81.16:0,81,958	0/0:13,0:13:36.11:0,36,435	0/0:12,0:18:35.21:0,35,159	0/0:4,0:11:19.37:0,19,92	0/1:14,0:15:3.10:3,0,271	0/0:25,0:27:53.46:0,53,484	0/0:4,0:4:6.02:0,6,70	1/1:2,25:27:63.09:608,63,0	1/1:0,31:31:78.33:778,78,0	0/0:20,0:20:54.17:0,54,651	0/0:16,0:16:42.13:0,42,507	0/0:23,0:24:47.95:0,48,503	0/0:19,0:20:38.89:0,39,385	0/0:3,0:4:11.85:0,12,108
chr10	87350970	.	AG	A	2898.27	PASS	AB=0.975;AC=25;AF=0.446;AN=56;BaseQRankSum=11.555;DP=558;FS=5.996;HRun=1;HaplotypeScore=108.6532;InbreedingCoeff=0.4599;MQ=64.40;MQ0=5;MQRankSum=-1.639;QD=8.63;ReadPosRankSum=-0.471;VQSLOD=0.7515;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:33:75.14:990,75,0	1/1:6,1:7:14.72:98,15,0	0/0:19,0:16:47.90:0,48,479	0/0:21,0:13:34.46:0,34,356	0/0:35,0:35:99:0,105,1375	0/1:16,0:16:41.83:42,0,44	1/1:15,0:15:0.73:39,1,0	0/1:19,1:20:7.35:191,0,7	0/0:16,0:16:45.08:0,45,605	1/1:20,2:21:26.19:284,26,0	1/1:34,5:38:90.05:584,90,0	0/0:16,0:16:45.09:0,45,579	0/0:18,0:18:54.13:0,54,681	0/0:19,0:19:54.10:0,54,645	0/0:28,0:28:78.22:0,78,1030	0/0:14,0:14:42.11:0,42,535	1/1:16,0:16:30.05:176,30,0	1/1:9,0:9:19.82:105,20,0	0/1:17,3:18:9.66:171,0,10	0/1:23,0:23:4.51:57,0,5	0/1:3,0:3:1.44:1,0,2	0/1:28,0:28:41.48:41,0,44	1/1:32,0:32:20.68:101,21,0	0/0:22,0:22:63.16:0,63,788	0/0:14,0:14:42.14:0,42,560	0/1:29,0:29:1.21:126,0,1	0/1:19,1:20:7.65:79,0,8	0/1:3,0:3:5.34:5,0,6
chr10	87351002	.	G	GA	738.09	PASS	AB=0.777;AC=9;AF=0.161;AN=56;BaseQRankSum=10.918;DP=625;FS=4.790;HRun=7;HaplotypeScore=152.3344;InbreedingCoeff=0.0488;MQ=65.12;MQ0=5;MQRankSum=-8.092;QD=5.09;ReadPosRankSum=-2.569;VQSLOD=-0.3898;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:75.23:0,75,898	0/0:9,0:9:24.06:0,24,276	0/0:35,0:16:24.93:0,25,363	0/0:52,0:29:7.31:0,7,410	0/0:34,0:34:99:0,102,1188	0/0:17,0:17:51.15:0,51,602	0/0:13,0:13:33.10:0,33,391	0/1:25,5:29:87.91:88,0,640	0/0:18,0:18:45.14:0,45,540	0/0:22,0:22:55.90:0,56,706	0/0:38,0:38:71.84:0,72,1020	0/0:16,0:16:45.12:0,45,528	0/0:18,0:18:54.16:0,54,644	0/0:23,0:23:63.18:0,63,744	0/0:24,0:24:66.20:0,66,791	0/0:21,0:21:60.14:0,60,704	0/0:17,0:17:35.48:0,35,497	0/1:10,0:10:7.03:7,0,236	0/1:18,5:22:81.61:82,0,476	0/1:15,10:25:99:187,0,417	1/1:4,0:3:8.98:92,9,0	0/0:24,0:24:69.21:0,69,823	0/0:30,0:30:85.14:0,85,1000	0/0:21,0:21:48.88:0,49,606	0/0:12,0:12:36.11:0,36,432	0/1:14,10:24:99:160,0,372	0/1:15,7:22:99:133,0,428	0/1:2,5:7:50.91:131,0,51
chr10	87351006	.	G	GA	1024.09	PASS	AB=0.962;AC=10;AF=0.179;AN=56;BaseQRankSum=10.590;DP=630;FS=5.577;HRun=3;HaplotypeScore=150.7653;InbreedingCoeff=-0.0164;MQ=66.26;MQ0=7;MQRankSum=-8.751;QD=5.02;ReadPosRankSum=-1.258;VQSLOD=-0.1019;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:69.21:0,69,823	0/0:9,0:9:23.64:0,24,234	0/0:41,0:20:38.64:0,39,452	0/1:56,0:31:32.38:32,0,381	0/0:32,0:32:93.27:0,93,1103	0/0:17,0:17:42.13:0,42,504	0/0:12,0:12:30.08:0,30,349	0/1:28,3:30:91.38:91,0,586	0/0:17,0:17:45.14:0,45,540	0/0:23,0:23:31.47:0,31,564	0/0:38,0:38:42.21:0,42,927	0/0:16,0:16:45.14:0,45,540	0/0:18,0:18:51.16:0,51,612	0/0:24,0:24:66.19:0,66,780	0/0:22,0:22:60.17:0,60,709	0/0:20,0:20:60.18:0,60,720	0/0:17,0:17:29.14:0,29,413	0/1:11,0:10:2.01:2,0,209	0/1:21,2:22:99:128,0,438	0/1:25,1:26:99:288,0,416	1/1:0,4:3:6.02:70,6,0	0/0:25,0:25:75.23:0,75,899	0/0:30,0:30:88.11:0,88,1011	0/0:21,0:21:1.23:0,1,493	0/0:12,0:12:36.11:0,36,432	0/1:22,1:23:99:216,0,356	0/1:21,1:22:99:192,0,430	0/1:7,0:7:50.86:144,0,51
chr10	87351007	.	AAATT	A	1837.63	PASS	AB=0.831;AC=11;AF=0.196;AN=56;BaseQRankSum=9.208;DP=635;FS=1.077;HRun=0;HaplotypeScore=181.2373;InbreedingCoeff=-0.0347;MQ=66.15;MQ0=7;MQRankSum=-7.600;QD=9.47;ReadPosRankSum=0.084;VQSLOD=3.1792;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:69.23:0,69,1715	0/0:9,0:9:22.89:0,23,409	0/0:43,0:21:53.20:0,53,862	0/0:59,0:33:42.97:0,43,773	0/0:31,0:31:93.32:0,93,2458	0/0:17,0:17:42.05:0,42,832	0/0:12,0:12:30.06:0,30,574	0/1:29,4:32:99:133,0,1413	0/0:17,0:17:48.16:0,48,1220	0/1:24,0:24:1.97:2,0,1097	0/0:38,0:38:61.86:0,62,1924	0/0:16,0:16:48.16:0,48,1198	0/0:18,0:18:51.17:0,51,1368	0/0:24,0:24:66.23:0,66,1644	0/0:21,0:21:60.19:0,60,1573	0/0:20,0:20:60.21:0,60,1585	0/0:17,0:17:42.93:0,43,885	0/1:10,1:10:22.44:22,0,416	0/1:19,3:21:99:205,0,932	0/1:17,10:27:99:524,0,970	1/1:4,0:3:6.02:76,6,0	0/0:25,0:25:75.25:0,75,1446	0/0:30,0:30:88.16:0,88,1628	0/1:21,0:21:8.67:9,0,1092	0/0:12,0:12:36.12:0,36,916	0/1:14,9:23:99:426,0,777	0/1:15,7:22:99:350,0,996	0/1:2,5:7:99:236,0,141
chr10	87351011	.	T	TAAAGAAAAGA	11969.30	PASS	AB=0.984;AC=26;AF=0.464;AN=56;BaseQRankSum=4.305;DP=650;FS=2.791;HRun=0;HaplotypeScore=228.2827;InbreedingCoeff=0.8256;MQ=66.55;MQ0=7;MQRankSum=-11.019;QD=35.10;ReadPosRankSum=-2.977;VQSLOD=3.9196;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:41.67:0,42,945	1/1:4,6:10:15.05:653,15,0	0/0:41,0:19:17.78:0,18,268	0/1:58,0:33:24.94:25,0,195	0/0:32,0:32:75.23:0,75,1983	0/0:14,0:14:33.11:0,33,991	0/0:10,0:10:18.06:0,18,468	1/1:34,0:33:60.18:1063,60,0	0/0:16,0:16:42.14:0,42,1131	1/1:7,20:30:78.22:2624,78,0	1/1:23,15:40:42.09:1448,42,0	0/0:17,0:17:33.11:0,33,957	0/0:18,0:18:39.12:0,39,1070	0/0:23,0:23:45.15:0,45,1332	0/0:19,0:19:36.11:0,36,976	0/0:20,0:20:54.17:0,54,1554	1/1:13,8:23:18.06:790,18,0	1/1:8,2:10:8.73:241,9,0	1/1:23,0:22:42.14:897,42,0	1/1:29,0:29:60.20:1149,60,0	1/1:4,0:3:6.02:109,6,0	0/0:25,0:25:54.17:0,54,1420	0/0:28,0:28:49.37:0,49,1250	0/1:20,0:20:60.79:61,0,630	0/0:14,0:14:18.02:0,18,308	1/1:19,5:27:57.20:1421,57,0	1/1:23,0:23:60.17:1151,60,0	1/1:7,0:7:18.06:336,18,0
chr10	87351039	.	A	AG	995.19	PASS	AB=0.869;AC=8;AF=0.143;AN=56;BaseQRankSum=6.259;DP=580;FS=5.203;HRun=0;HaplotypeScore=129.0053;InbreedingCoeff=-0.1891;MQ=72.02;MQ0=4;MQRankSum=-6.282;QD=5.16;ReadPosRankSum=-3.912;VQSLOD=2.0228;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:54.13:0,54,714	0/0:11,0:11:1.67:0,2,184	0/0:33,0:23:63.01:0,63,767	0/0:43,0:28:51.82:0,52,584	0/0:27,0:27:81.24:0,81,1084	0/0:17,0:17:48.16:0,48,670	0/0:12,0:12:33.09:0,33,430	0/1:22,10:31:99:302,0,541	0/0:20,0:20:57.17:0,57,766	0/1:26,0:26:31.09:31,0,488	0/0:26,0:26:1.60:0,2,480	0/0:15,0:15:45.15:0,45,629	0/0:21,0:21:63.19:0,63,846	0/0:16,0:16:48.16:0,48,671	0/0:15,0:15:45.14:0,45,613	0/0:21,0:21:63.21:0,63,881	0/0:20,0:20:26.51:0,27,405	0/0:11,0:11:10.99:0,11,296	0/1:24,5:29:99:179,0,709	0/1:20,4:24:99:145,0,698	0/0:10,0:9:20.78:0,21,230	0/0:18,0:18:54.17:0,54,737	0/0:20,0:20:54.12:0,54,691	0/1:16,2:18:30.09:30,0,574	0/0:7,0:7:21.07:0,21,293	0/1:25,2:27:73.90:74,0,780	0/1:20,9:29:99:340,0,590	0/1:7,1:8:27.99:28,0,191
chr10	87351244	.	AATAC	A	2422.93	PASS	AB=0.935;AC=12;AF=0.214;AN=56;BaseQRankSum=9.549;DP=559;FS=6.145;HRun=0;HaplotypeScore=111.6793;InbreedingCoeff=0.7809;MQ=70.63;MQ0=3;MQRankSum=2.075;QD=20.71;ReadPosRankSum=2.340;VQSLOD=3.2041;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:26:26.42:0,26,452	1/1:1,4:5:12.04:197,12,0	0/0:45,0:26:24.08:0,24,520	0/0:34,0:24:32.29:0,32,600	0/0:23,0:23:29.24:0,29,1196	0/0:12,0:12:18.06:0,18,435	0/0:25,0:25:60.21:0,60,1418	0/0:28,0:28:36.06:0,36,693	0/0:20,0:20:54.19:0,54,1267	1/1:5,15:20:45.15:729,45,0	1/1:2,14:16:33.07:499,33,0	0/1:14,1:15:10.02:10,0,784	0/0:12,0:12:30.10:0,30,726	0/0:13,0:13:30.10:0,30,680	0/0:13,0:13:33.11:0,33,795	0/0:18,0:18:42.11:0,42,925	1/1:7,19:26:54.18:874,54,0	1/1:1,6:7:15.05:246,15,0	0/0:12,0:11:21.04:0,21,402	0/0:19,0:19:42.14:0,42,991	0/0:36,0:36:87.25:0,87,1965	0/0:18,0:18:45.11:0,45,957	0/0:24,0:24:57.20:0,57,1350	0/0:17,0:17:36.12:0,36,841	0/0:10,0:10:18.06:0,18,439	0/1:26,2:28:47.10:47,0,990	0/0:24,0:24:51.18:0,51,1214	0/0:12,0:12:30.10:0,30,688
chr10	87352155	.	TTGTG	T	2368.42	PASS	AB=0.843;AC=30;AF=0.600;AN=50;BaseQRankSum=7.490;DP=654;FS=12.091;HRun=0;HaplotypeScore=123.5897;InbreedingCoeff=0.0687;MQ=60.05;MQ0=18;MQRankSum=-2.079;QD=4.93;ReadPosRankSum=3.332;VQSLOD=1.0075;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:33:15.87:22,0,16	1/1:6,7:13:8.61:120,9,0	./.	./.	0/0:23,0:22:17.85:0,18,280	1/1:21,0:22:5.96:47,6,0	1/1:27,0:26:2.97:20,3,0	1/1:23,0:23:2.74:12,3,0	0/1:20,1:22:58.12:58,0,204	0/1:23,4:27:38.49:250,0,38	0/1:16,4:20:8.32:19,0,8	0/0:13,0:16:21.36:0,21,376	0/1:12,1:19:24.92:88,0,25	0/0:14,0:13:15.03:0,15,253	0/0:21,0:20:20.09:0,20,362	1/1:7,12:19:21.03:280,21,0	1/1:17,13:29:42.13:626,42,0	1/1:10,10:20:12.04:185,12,0	1/1:16,0:16:5.98:63,6,0	0/1:15,9:21:2.59:157,0,3	0/1:49,0:45:12.52:46,0,13	1/1:16,0:19:3:28,3,0	./.	0/0:40,0:41:50.79:0,51,746	0/1:19,2:21:20.39:20,0,421	1/1:19,8:27:1.04:213,1,0	0/1:20,4:26:9.48:149,0,9	0/1:10,2:14:58.26:130,0,58
chr10	87353522	.	T	TA	1154.18	PASS	AB=1.000;AC=18;AF=0.429;AN=42;BaseQRankSum=4.345;DP=321;FS=1.312;HRun=7;HaplotypeScore=62.2241;InbreedingCoeff=0.5991;MQ=83.22;MQ0=2;MQRankSum=1.091;QD=7.08;ReadPosRankSum=-1.492;VQSLOD=0.0367;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:5,0:5:4.83:30,5,0	0/0:23,1:12:13.07:0,13,101	0/1:20,0:14:7.85:8,0,15	0/0:23,0:23:66:0,66,607	1/1:3,8:10:9.03:106,9,0	1/1:3,10:13:4.09:309,4,0	./.	0/0:10,0:10:29.99:0,30,276	1/1:30,0:29:20.55:155,21,0	0/1:18,0:18:1.27:51,0,1	0/0:18,0:18:50.99:0,51,473	0/0:10,0:10:20.95:0,21,182	0/0:18,0:18:50.93:0,51,465	0/0:16,0:16:41.89:0,42,363	0/0:18,0:18:42.01:0,42,390	0/1:26,0:26:18.05:51,0,18	0/1:12,0:12:2.30:15,0,2	./.	./.	./.	1/1:0,8:8:24.07:283,24,0	1/1:1,16:17:27.04:303,27,0	0/0:8,0:8:18.03:0,18,173	0/0:13,0:13:36.04:0,36,339	1/1:1,0:1:0.47:1,0,0	./.	./.
chr10	87354007	.	C	CT	955.12	PASS	AB=1.000;AC=9;AF=0.225;AN=40;BaseQRankSum=5.546;DP=292;FS=0.000;HRun=11;HaplotypeScore=46.4045;InbreedingCoeff=0.7826;MQ=60.97;MQ0=9;MQRankSum=0.818;QD=17.69;ReadPosRankSum=0.519;VQSLOD=4.2364;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:8,0:8:14.97:0,15,142	0/0:9,0:4:5.92:0,6,44	0/1:8,0:3:6.28:6,0,25	0/0:19,0:17:38.92:0,39,379	1/1:3,8:10:15.05:184,15,0	1/1:2,10:12:24.08:296,24,0	./.	0/0:13,0:12:23.27:0,23,221	0/0:13,0:13:33.07:0,33,335	0/0:11,0:11:26.99:0,27,253	0/0:12,0:11:1.15:0,1,191	0/0:12,0:11:24.25:0,24,288	0/0:18,0:18:45.09:0,45,452	0/0:14,0:13:27.04:0,27,268	0/0:10,0:10:27.06:0,27,274	0/0:32,0:30:78.12:0,78,775	0/0:17,0:18:38.11:0,38,372	./.	./.	./.	1/1:4,8:12:13.84:235,14,0	1/1:2,9:11:33.07:378,33,0	0/0:32,0:32:82.87:0,83,854	0/0:13,0:13:33.06:0,33,330	./.	./.	./.
chr10	87354129	.	G	GT	1449.79	PASS	AC=8;AF=0.190;AN=42;BaseQRankSum=-1.738;DP=318;FS=10.464;HRun=5;HaplotypeScore=99.3422;InbreedingCoeff=0.9427;MQ=87.10;MQ0=0;MQRankSum=-4.394;QD=30.85;ReadPosRankSum=1.460;VQSLOD=3.2752;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:10,0:10:27.07:0,27,290	0/0:31,0:31:87.17:0,87,906	0/0:22,0:22:51.11:0,51,537	0/0:11,0:11:30.08:0,30,322	1/1:0,9:9:24.08:316,24,0	1/1:1,16:17:45.02:533,45,0	./.	0/0:15,0:15:35.98:0,36,375	0/0:19,0:19:57.14:0,57,612	0/0:6,0:6:15.03:0,15,161	0/0:13,0:13:36.09:0,36,387	0/0:17,0:17:48.12:0,48,516	0/0:20,0:20:57.12:0,57,601	0/0:15,0:15:42.09:0,42,443	0/0:19,0:19:57.14:0,57,612	0/0:25,0:25:75.19:0,75,806	0/0:13,0:13:36.09:0,36,387	./.	./.	./.	1/1:0,13:13:33.11:434,33,0	1/1:0,8:8:24.08:315,24,0	0/0:27,0:27:69.17:0,69,741	0/0:7,0:7:21.05:0,21,225	0/0:1,0:1:3.01:0,3,32	./.	./.
chr10	87354876	.	GA	G	3224.61	PASS	AB=0.552;AC=15;AF=0.268;AN=56;BaseQRankSum=10.530;DP=509;FS=1.226;HRun=10;HaplotypeScore=61.0164;InbreedingCoeff=0.8797;MQ=58.87;MQ0=8;MQRankSum=-6.788;QD=19.66;ReadPosRankSum=0.131;VQSLOD=4.4398;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:68.96:599,69,0	0/0:4,0:4:9.02:0,9,100	0/0:11,0:7:17.67:0,18,158	0/0:10,0:8:21.05:0,21,225	0/0:25,0:24:66.18:0,66,730	0/0:25,0:24:63.17:0,63,697	0/0:21,0:19:54.12:0,54,585	1/1:6,27:32:77.64:661,78,0	0/0:15,0:15:36.10:0,36,398	0/0:21,0:20:54.15:0,54,597	0/0:20,0:20:42.11:0,42,465	0/0:17,1:17:16.06:0,16,405	0/0:13,0:13:39.07:0,39,419	0/0:13,1:14:7.02:0,7,299	0/0:8,0:8:21.06:0,21,232	0/0:15,0:15:44.91:0,45,477	0/0:29,0:29:75.16:0,75,809	0/0:30,2:32:35.13:0,35,842	1/1:1,17:18:50.97:439,51,0	1/1:3,18:20:47.97:417,48,0	1/1:0,8:7:21:182,21,0	0/0:19,0:19:39.10:0,39,430	0/0:15,0:15:30.97:0,31,333	0/0:20,0:20:45.12:0,45,498	0/0:10,0:10:24.54:0,25,266	0/1:3,13:16:21.37:294,0,21	1/1:0,14:14:32.99:286,33,0	1/1:2,22:23:62.98:547,63,0
chr10	87355096	.	T	TAGAG	8154.51	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-13.131;DP=712;FS=28.727;HRun=0;HaplotypeScore=143.2544;InbreedingCoeff=0.9998;MQ=70.73;MQ0=0;MQRankSum=-3.492;QD=60.85;ReadPosRankSum=3.451;VQSLOD=3.9010;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:95.96:0,96,1798	1/1:0,13:13:33.11:879,33,0	0/0:31,0:31:87.13:0,87,1488	0/0:21,0:20:54.13:0,54,886	0/0:28,0:28:75.24:0,75,1349	0/0:22,0:22:57.17:0,57,970	0/0:28,0:28:81.25:0,81,1430	0/0:25,0:25:69.20:0,69,1138	0/0:30,0:30:81.28:0,81,1500	1/1:3,28:32:87.27:2162,87,0	1/1:2,21:23:54.19:1437,54,0	0/0:28,0:28:84.24:0,84,1501	0/0:27,0:27:75.26:0,75,1374	0/0:18,0:18:54.16:0,54,968	0/0:28,0:28:78.27:0,78,1445	0/0:25,0:25:75.26:0,75,1389	1/1:5,32:38:84.29:2213,84,0	1/1:6,21:28:30.81:1463,31,0	0/0:16,0:16:48.14:0,48,795	0/0:17,0:17:48.08:0,48,748	0/0:37,0:37:99:0,103,1836	0/0:28,0:28:81.17:0,81,1216	0/0:27,0:27:75.12:0,75,1174	0/0:24,0:24:72.25:0,72,1331	0/0:23,0:23:60.21:0,60,1106	0/0:18,0:18:48.13:0,48,770	0/0:21,0:21:57.20:0,57,1054	0/0:12,0:12:33.05:0,33,517
chr10	87355785	.	C	CTG	14959.85	PASS	AB=0.529;AC=23;AF=0.411;AN=56;BaseQRankSum=-18.749;DP=748;FS=0.579;HRun=0;HaplotypeScore=79.2047;InbreedingCoeff=0.9465;MQ=84.89;MQ0=3;MQRankSum=-3.538;QD=43.24;ReadPosRankSum=0.339;VQSLOD=6.0065;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,42:46:99:2108,120,0	0/0:13,0:13:39.12:0,39,521	0/0:25,0:25:32.36:0,32,605	0/0:23,0:23:56.74:0,57,730	0/0:32,0:32:90.29:0,90,1219	1/1:2,20:22:57.20:1011,57,0	1/1:5,18:23:39.13:692,39,0	1/1:2,23:25:69.24:1221,69,0	0/0:25,0:25:72.23:0,72,972	0/0:30,0:30:84.27:0,84,1137	0/0:30,0:30:87.29:0,87,1192	0/0:17,0:17:51.17:0,51,701	0/0:28,0:28:78.26:0,78,1071	0/0:25,0:25:72.24:0,72,989	0/0:25,0:25:72.24:0,72,989	0/0:32,0:32:90.27:0,90,1205	0/0:31,0:31:90.24:0,90,1198	0/0:14,0:14:39.13:0,39,536	1/1:7,27:33:84.29:1485,84,0	1/1:4,22:27:63.21:1096,63,0	1/1:3,35:37:90.31:1597,90,0	1/1:3,21:25:60.21:1059,60,0	1/1:2,20:22:63.22:1115,63,0	0/0:28,0:28:81.23:0,81,1078	0/0:24,0:24:72.24:0,72,988	0/1:3,24:27:4.21:1199,0,4	1/1:4,38:44:99:1898,108,0	1/1:2,10:11:27.09:479,27,0
chr10	87357088	.	A	AT	4671.72	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=-2.404;DP=506;FS=2.093;HRun=9;HaplotypeScore=57.3881;InbreedingCoeff=0.8962;MQ=76.92;MQ0=0;MQRankSum=-0.021;QD=20.05;ReadPosRankSum=-1.299;VQSLOD=4.8286;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:63.17:697,63,0	0/0:10,0:10:26.94:0,27,225	0/0:26,1:23:19.93:0,20,196	0/1:10,0:8:6.17:6,0,107	0/0:26,0:26:59.04:0,59,516	1/1:1,0:20:45.45:227,45,0	1/1:0,0:6:11.36:57,11,0	1/1:5,15:20:22.04:454,22,0	0/0:15,0:15:38.98:0,39,339	0/0:21,0:21:53.98:0,54,469	0/0:24,0:25:68.02:0,68,579	0/0:17,0:17:41.98:0,42,365	0/0:17,0:17:44.94:0,45,384	0/0:13,0:13:35.97:0,36,307	0/0:17,0:17:47.99:0,48,417	0/0:14,0:14:41.98:0,42,361	0/0:17,0:17:39.46:0,39,339	0/0:16,0:16:41.97:0,42,359	1/1:5,6:11:12.03:133,12,0	1/1:3,25:28:26.16:718,26,0	1/1:0,12:12:36.10:398,36,0	1/1:3,0:13:31.57:171,32,0	1/1:2,0:20:39.77:199,40,0	0/0:15,0:15:35.98:0,36,313	0/0:23,0:23:59.92:0,60,508	1/1:9,21:31:0.51:649,1,0	1/1:5,21:26:54.15:597,54,0	1/1:0,14:14:33.09:365,33,0
chr10	87357317	.	C	CTT	3596.10	PASS	AB=0.767;AC=26;AF=0.464;AN=56;BaseQRankSum=-2.108;DP=555;FS=3.533;HRun=12;HaplotypeScore=79.3389;InbreedingCoeff=0.8238;MQ=70.12;MQ0=3;MQRankSum=0.813;QD=11.42;ReadPosRankSum=-1.594;VQSLOD=2.0690;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:34:17.83:150,18,0	0/1:1,1:7:14.90:22,0,15	0/1:26,0:19:8:8,0,117	0/0:14,0:12:7.02:0,7,59	0/0:26,0:27:62.74:0,63,566	0/0:3,0:15:29.73:0,30,125	0/0:6,0:15:19.15:0,19,83	1/1:17,21:40:66.23:759,66,0	0/0:14,0:15:29.70:0,30,262	1/1:7,1:28:57.17:269,57,0	1/1:3,0:18:27.05:93,27,0	0/0:20,0:20:41.94:0,42,384	0/0:16,0:16:42.03:0,42,388	0/0:18,0:18:32.82:0,33,304	0/0:13,0:13:33.02:0,33,305	0/0:14,0:14:33:0,33,300	1/1:3,1:25:42.94:180,43,0	1/1:4,0:19:5.17:78,5,0	1/1:7,8:16:23.72:267,24,0	1/1:4,18:26:55.86:564,56,0	1/1:4,8:13:9.03:126,9,0	0/0:5,0:16:18.44:0,18,89	0/0:3,0:13:27.26:0,27,116	0/0:25,0:28:56.30:0,56,542	0/0:16,0:16:38.65:0,39,333	1/1:6,11:21:31.90:410,32,0	1/1:5,16:22:38.61:500,39,0	1/1:7,8:16:12.04:168,12,0
chr10	87358026	.	A	AAC	8848.63	PASS	AB=0.689;AC=21;AF=0.375;AN=56;BaseQRankSum=6.625;DP=1006;FS=121.825;HRun=0;HaplotypeScore=257.4544;InbreedingCoeff=0.7838;MQ=49.60;MQ0=20;MQRankSum=-10.372;QD=21.74;ReadPosRankSum=-9.887;VQSLOD=1.1002;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,17:31:84.17:504,0,84	0/0:13,0:13:36.12:0,36,467	0/0:51,0:23:54.15:0,54,686	0/0:60,0:23:22.91:0,23,380	0/0:29,0:29:75.24:0,75,986	1/1:6,10:15:33.11:533,33,0	1/1:19,21:40:55.72:778,56,0	0/1:23,13:32:36.12:859,0,36	0/0:50,0:50:99:0,132,1720	0/0:57,0:57:99:0,159,2042	0/0:31,0:31:84.25:0,84,1084	0/0:38,0:38:99:0,108,1405	0/0:31,0:31:87.28:0,87,1138	0/0:27,0:27:72.19:0,72,912	0/0:42,0:42:99:0,114,1478	0/0:39,0:39:99:0,109,1420	0/0:34,0:34:75.38:0,75,1055	0/0:29,0:28:19.21:0,19,741	1/1:10,10:19:36.12:616,36,0	1/1:14,25:37:51.68:754,52,0	1/1:31,36:64:57.63:949,58,0	1/1:17,38:51:27.56:917,28,0	1/1:15,18:33:34.41:572,34,0	0/0:44,0:43:99:0,114,1467	0/0:24,0:24:69.22:0,69,906	0/1:21,19:39:6.57:1300,0,7	1/1:5,15:20:45.15:721,45,0	1/1:1,7:7:21.07:345,21,0
chr10	87358033	.	A	ACG	4602.77	PASS	AB=0.975;AC=19;AF=0.339;AN=56;BaseQRankSum=16.411;DP=1016;FS=113.341;HRun=0;HaplotypeScore=284.5686;InbreedingCoeff=0.5971;MQ=51.07;MQ0=21;MQRankSum=-9.681;QD=11.36;ReadPosRankSum=-6.825;VQSLOD=1.6047;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,1:27:99:261,0,132	0/0:13,0:13:39.06:0,39,554	0/0:48,0:20:54.18:0,54,817	0/0:63,0:28:37.89:0,38,506	0/0:29,0:29:81.19:0,81,1187	1/1:16,0:15:32.87:312,33,0	0/1:44,0:44:77.19:307,0,77	0/1:40,0:34:99:377,0,182	0/0:52,0:52:99:0,149,2146	0/0:58,0:58:99:0,174,2512	0/0:32,0:32:90.18:0,90,1286	0/0:38,0:38:99:0,114,1666	0/0:33,0:33:96.28:0,96,1399	0/0:27,0:27:81.18:0,81,1125	0/0:42,0:42:99:0,123,1807	0/0:40,0:40:99:0,115,1700	0/0:33,0:33:87.47:0,87,1268	0/0:28,0:27:53.43:0,53,950	0/1:18,0:18:61.13:258,0,61	1/1:38,4:41:39.14:388,39,0	1/1:61,0:58:51.87:503,52,0	1/1:54,0:50:18.87:495,19,0	1/1:32,0:31:14.74:276,15,0	0/0:45,0:44:99:0,123,1762	0/0:24,0:24:72.23:0,72,1079	0/1:37,4:40:89.76:754,0,90	1/1:19,1:20:30.90:439,31,0	1/1:9,0:8:23.98:232,24,0
chr10	87358049	.	T	TCA	6623.74	PASS	AB=0.752;AC=22;AF=0.393;AN=56;BaseQRankSum=14.865;DP=993;FS=95.031;HRun=0;HaplotypeScore=291.2968;InbreedingCoeff=0.8484;MQ=52.96;MQ0=12;MQRankSum=-13.121;QD=17.52;ReadPosRankSum=-2.699;VQSLOD=1.6434;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,8:25:43.77:224,0,44	0/0:11,0:11:30.07:0,30,380	0/0:49,0:25:39.94:0,40,552	0/0:57,0:31:39.54:0,40,449	0/0:25,0:25:66.17:0,66,827	1/1:7,8:15:27.09:436,27,0	1/1:25,17:43:48.72:897,49,0	1/1:19,17:31:55.59:906,56,0	0/0:56,0:56:99:0,153,1946	0/0:62,0:62:99:0,160,2081	0/0:33,0:33:93.24:0,93,1186	0/0:40,0:40:99:0,105,1344	0/0:34,0:34:99:0,99,1255	0/0:27,0:27:78.24:0,78,1019	0/0:45,0:45:99:0,117,1490	0/0:38,0:38:80.97:0,81,1190	0/0:30,0:30:84.19:0,84,1050	0/0:29,0:29:56.66:0,57,855	1/1:8,7:14:30.10:452,30,0	1/1:26,14:42:31.45:567,31,0	1/1:37,11:47:18.67:324,19,0	1/1:41,10:51:48.01:639,48,0	1/1:30,6:36:28.40:320,28,0	0/0:50,0:49:99:0,135,1723	0/0:28,0:28:78.23:0,78,1019	0/1:27,14:41:23.48:1080,0,23	1/1:9,7:16:30.06:453,30,0	1/1:4,5:9:21.07:326,21,0
chr10	87358055	.	A	ACT	5192.32	PASS	AB=0.864;AC=23;AF=0.411;AN=56;BaseQRankSum=17.198;DP=982;FS=76.621;HRun=0;HaplotypeScore=303.7026;InbreedingCoeff=0.8932;MQ=51.46;MQ0=9;MQRankSum=-13.946;QD=13.85;ReadPosRankSum=-2.192;VQSLOD=2.0053;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,4:22:13.94:156,14,0	0/0:12,0:12:34.33:0,34,439	0/0:44,0:24:60.44:0,60,724	0/0:50,0:28:52.89:0,53,690	0/0:25,0:25:63.17:0,63,846	1/1:15,1:17:5.98:276,6,0	0/1:40,8:51:54.52:501,0,55	1/1:25,4:27:11.57:508,12,0	0/0:56,0:56:99:0,162,2189	0/0:60,0:60:99:0,177,2409	0/0:33,0:33:90.29:0,90,1265	0/0:38,0:38:99:0,105,1421	0/0:36,0:36:99:0,99,1345	0/0:27,0:27:78.25:0,78,1097	0/0:42,0:42:99:0,117,1644	0/0:35,0:35:99:0,102,1366	0/0:33,0:33:90.24:0,90,1208	0/0:33,0:32:55.34:0,55,935	1/1:13,3:14:12.07:348,12,0	1/1:27,18:45:28.17:436,28,0	1/1:39,0:36:14.22:186,14,0	1/1:25,22:49:29.98:653,30,0	1/1:14,20:34:28.13:410,28,0	0/0:54,0:53:99:0,141,1911	0/0:29,0:29:84.18:0,84,1151	1/1:28,14:44:47.18:1092,47,0	1/1:15,3:18:15.71:358,16,0	1/1:5,3:8:21.06:267,21,0
chr10	87358057	.	T	TCA	2036.63	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=17.196;DP=978;FS=60.213;HRun=0;HaplotypeScore=311.2700;InbreedingCoeff=0.5300;MQ=51.54;MQ0=10;MQRankSum=-15.274;QD=5.49;ReadPosRankSum=-1.916;VQSLOD=0.9594;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:22:9.05:59,9,0	0/0:12,0:12:21.05:0,21,454	0/0:46,0:24:57.61:0,58,747	0/0:49,0:27:52.81:0,53,744	0/0:24,0:24:60.20:0,60,853	0/1:18,0:18:39.08:98,0,39	0/1:50,0:50:99:152,0,186	0/1:33,0:27:59.95:122,0,60	0/0:56,0:56:99:0,162,2224	0/0:60,0:60:99:0,178,2463	0/0:33,0:33:90.30:0,90,1281	0/0:36,0:36:96.32:0,96,1371	0/0:35,0:35:99:0,102,1393	0/0:27,0:27:78.25:0,78,1099	0/0:44,0:44:99:0,114,1564	0/0:36,0:36:99:0,100,1397	0/0:33,0:33:92.58:0,93,1202	0/0:33,0:32:53.51:0,54,907	0/1:17,0:14:7.79:139,0,8	1/1:45,0:45:3.01:183,3,0	1/1:32,4:32:11.73:73,12,0	1/1:47,0:47:10.50:340,11,0	1/1:35,0:35:28.30:258,28,0	0/0:53,0:52:99:0,144,2011	0/0:29,0:29:84.25:0,84,1156	1/1:43,0:43:2.57:517,3,0	0/1:17,0:17:13.56:152,0,14	1/1:8,0:8:19.78:132,20,0
chr10	87358061	.	T	TCA	1176.12	PASS	AB=0.852;AC=11;AF=0.196;AN=56;BaseQRankSum=9.715;DP=970;FS=21.346;HRun=0;HaplotypeScore=303.5373;InbreedingCoeff=-0.2437;MQ=51.69;MQ0=9;MQRankSum=-8.284;QD=3.61;ReadPosRankSum=-2.344;VQSLOD=1.0829;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,3:18:14.66:0,15,108	0/1:11,1:12:20.70:21,0,321	0/0:43,0:22:45.59:0,46,627	0/0:49,0:27:57.73:0,58,686	0/0:24,0:24:57.18:0,57,739	0/1:18,1:19:17.63:18,0,237	0/1:42,8:50:75.31:75,0,679	0/1:32,3:29:14.19:14,0,503	0/0:59,0:59:99:0,141,1803	0/0:62,0:62:99:0,150,1917	0/0:31,0:31:87.26:0,87,1111	0/0:34,0:34:96.27:0,96,1226	0/0:35,0:35:93.30:0,93,1200	0/0:27,0:27:81.25:0,81,1039	0/0:42,0:42:99:0,105,1336	0/0:39,0:39:99:0,106,1350	0/0:33,1:34:71.26:0,71,901	0/0:32,0:31:46.95:0,47,644	0/1:14,3:14:99:101,0,173	0/1:33,10:43:52.86:53,0,217	0/0:34,0:31:21.18:0,21,136	0/1:33,12:44:99:320,0,133	0/1:27,13:40:39.93:201,0,40	0/0:51,0:50:99:0,120,1560	0/0:29,0:29:72.22:0,72,922	0/1:33,8:41:99:419,0,332	0/1:15,1:16:22.21:22,0,177	0/1:5,3:8:80.26:80,0,94
chr10	87358078	.	TAC	T	1465.94	PASS	AB=0.896;AC=10;AF=0.179;AN=56;BaseQRankSum=8.545;DP=957;FS=102.782;HRun=0;HaplotypeScore=311.8616;InbreedingCoeff=0.2530;MQ=53.30;MQ0=8;MQRankSum=-9.106;QD=7.22;ReadPosRankSum=-1.674;VQSLOD=0.6304;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,2:19:8.57:144,0,9	0/0:9,0:9:4.65:0,5,339	0/0:40,0:21:35.36:0,35,493	0/0:46,0:29:42.62:0,43,774	0/0:21,0:21:60.21:0,60,1042	0/0:22,0:22:50.70:0,51,806	0/0:50,0:50:99:0,106,1563	1/1:25,6:27:37.19:446,37,0	0/0:54,0:54:99:0,154,2633	0/0:53,0:53:99:0,139,2363	0/0:34,0:34:93.28:0,93,1550	0/0:42,0:42:99:0,111,1816	0/0:35,0:35:93.32:0,93,1588	0/0:30,0:30:78.25:0,78,1338	0/0:40,0:40:66.40:0,66,1663	0/0:38,0:38:99:0,111,1917	0/0:32,0:32:83.73:0,84,1302	0/0:30,0:29:53.46:0,53,1170	0/1:13,2:12:82.33:190,0,82	0/1:34,8:42:32.87:161,0,33	1/1:35,3:35:7.01:51,7,0	0/0:55,0:54:56.30:0,56,906	0/0:45,0:45:53.82:0,54,820	0/0:49,0:48:99:0,132,2279	0/0:28,0:28:78.27:0,78,1352	0/1:33,3:35:30.01:446,0,30	0/1:11,2:14:13.68:137,0,14	0/1:8,0:8:43.99:44,0,44
chr10	87358083	.	A	ACT	1556.90	PASS	AB=0.834;AC=8;AF=0.143;AN=56;BaseQRankSum=8.160;DP=972;FS=107.515;HRun=0;HaplotypeScore=319.1855;InbreedingCoeff=-0.0564;MQ=53.83;MQ0=9;MQRankSum=-9.263;QD=7.56;ReadPosRankSum=-2.505;VQSLOD=0.8077;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,3:18:52.20:194,0,52	0/0:9,0:9:7.64:0,8,322	0/0:40,0:22:37.01:0,37,472	0/0:53,0:31:54.61:0,55,855	0/0:21,0:21:63.20:0,63,938	0/0:22,0:22:50.99:0,51,639	0/0:50,0:50:99:0,108,1415	0/1:26,6:28:94.19:395,0,94	0/0:54,0:54:99:0,160,2369	0/0:52,0:52:99:0,144,2138	0/0:32,0:32:93.28:0,93,1367	0/0:44,0:44:99:0,123,1708	0/0:34,0:34:99:0,99,1453	0/0:31,0:31:87.23:0,87,1244	0/0:42,0:42:78.13:0,78,1539	0/0:38,0:38:99:0,114,1714	0/0:32,0:32:84.13:0,84,1190	0/0:35,0:34:42.54:0,43,1051	0/1:12,3:13:90.67:164,0,91	0/1:37,8:45:99:199,0,194	0/1:35,4:35:0.77:46,0,1	0/0:57,0:56:64.19:0,64,868	0/0:43,0:43:57.39:0,57,696	0/0:48,0:47:99:0,138,2050	0/0:27,0:27:78.26:0,78,1191	0/1:31,7:37:99:515,0,354	0/1:11,3:14:65.22:127,0,65	0/1:3,2:5:52.65:53,0,89
chr10	87358089	.	ACT	A	2487.08	PASS	AB=0.767;AC=18;AF=0.321;AN=56;BaseQRankSum=13.523;DP=958;FS=4.045;HRun=0;HaplotypeScore=311.5035;InbreedingCoeff=0.6378;MQ=55.27;MQ0=7;MQRankSum=-13.442;QD=6.93;ReadPosRankSum=-2.422;VQSLOD=2.3325;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,7:18:23.05:177,23,0	0/0:10,0:10:24.04:0,24,261	0/0:38,0:23:55.24:0,55,719	0/0:51,0:30:55.03:0,55,1006	0/0:20,0:20:60.21:0,60,1152	0/0:17,0:21:11.58:0,12,334	0/1:41,0:51:52.77:53,0,689	1/1:27,11:33:17.64:665,18,0	0/0:53,0:53:99:0,153,2845	0/0:46,0:46:99:0,120,1834	0/0:30,0:30:84.02:0,84,1038	0/0:46,0:46:99:0,126,2305	0/0:34,0:34:93.15:0,93,1666	0/0:32,0:32:96.29:0,96,1751	0/0:38,0:38:99:0,110,1881	0/0:38,0:38:99:0,114,2041	0/0:27,0:27:68.61:0,69,726	0/0:35,1:35:72.49:0,72,829	0/1:9,6:14:17.15:149,0,17	1/1:19,23:42:36.68:444,37,0	1/1:34,6:36:7.66:33,8,0	0/1:40,0:54:99:129,0,278	0/1:26,0:41:43.51:44,0,313	0/0:49,0:48:99:0,135,2503	0/0:29,0:29:81.28:0,81,1532	1/1:21,19:39:44.22:755,44,0	1/1:9,5:14:9.23:133,9,0	1/1:1,4:5:11.52:104,12,0
chr10	87358091	.	T	TCA	5654.51	PASS	AB=0.832;AC=15;AF=0.268;AN=56;BaseQRankSum=4.918;DP=957;FS=78.016;HRun=0;HaplotypeScore=301.4155;InbreedingCoeff=0.2751;MQ=55.32;MQ0=7;MQRankSum=-8.386;QD=14.88;ReadPosRankSum=-2.648;VQSLOD=2.0299;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,1:18:2.71:199,0,3	0/0:10,0:10:23.92:0,24,187	0/0:38,0:24:41.41:0,41,487	0/0:51,0:31:26.01:0,26,617	0/0:21,0:21:60.15:0,60,776	1/1:7,15:22:26.08:705,26,0	0/1:29,25:54:6.90:1083,0,7	0/1:21,18:34:1.52:890,0,2	0/0:53,0:53:99:0,138,1817	0/0:44,0:44:99:0,117,994	0/0:29,0:29:77.78:0,78,641	0/0:47,0:47:99:0,120,1548	0/0:32,0:32:87.24:0,87,1128	0/0:33,0:33:93.28:0,93,1205	0/0:38,0:38:96.03:0,96,1232	0/0:40,0:40:99:0,99,1296	0/0:25,0:25:68.11:0,68,515	0/0:37,0:36:58.35:0,58,592	1/1:14,0:14:8.06:207,8,0	0/1:38,2:40:57.22:331,0,57	1/1:40,1:37:6.48:39,6,0	0/1:26,26:51:52.90:649,0,53	0/1:25,16:41:11.54:672,0,12	0/0:49,0:48:99:0,126,1658	0/0:29,0:29:78.25:0,78,1032	0/1:39,1:39:66.73:665,0,67	0/1:11,1:13:11.06:149,0,11	0/1:5,0:5:14:67,0,14
chr10	87358093	.	ACACAC	A	2315.46	PASS	AB=0.893;AC=13;AF=0.232;AN=56;BaseQRankSum=14.456;DP=975;FS=43.668;HRun=0;HaplotypeScore=356.5394;InbreedingCoeff=-0.3024;MQ=55.31;MQ0=7;MQRankSum=-12.172;QD=5.66;ReadPosRankSum=-4.685;VQSLOD=0.7162;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,4:18:99:154,0,164	0/0:11,0:11:23.61:0,24,203	0/0:39,0:25:63.21:0,63,1517	0/0:51,0:32:41.79:0,42,1516	0/0:21,0:21:63.17:0,63,1714	0/1:22,0:22:38.18:38,0,813	0/1:56,0:56:99:317,0,1224	0/1:34,5:34:99:204,0,1100	0/0:56,0:56:99:0,151,4310	0/0:46,0:46:99:0,123,1257	0/0:29,0:29:78.11:0,78,815	0/0:48,0:48:99:0,126,3618	0/0:34,0:34:93.19:0,93,2538	0/0:34,0:34:99:0,99,2863	0/0:40,0:40:95.84:0,96,2963	0/0:40,0:40:99:0,105,3009	0/1:22,2:24:54.09:54,0,542	0/0:36,1:36:40.40:0,40,729	0/1:14,1:15:45.64:46,0,356	0/1:26,13:39:99:392,0,526	0/1:41,2:40:42.02:45,0,42	0/1:53,0:51:99:394,0,705	0/1:40,0:40:99:167,0,817	0/0:50,0:49:99:0,136,3909	0/0:29,0:29:81.28:0,81,2383	0/1:29,10:38:99:485,0,1008	0/1:12,3:15:90.36:90,0,368	0/1:3,2:5:82.47:82,0,118
chr10	87358098	.	CCA	C	4554.53	PASS	AB=0.996;AC=16;AF=0.286;AN=56;BaseQRankSum=8.947;DP=948;FS=21.283;HRun=0;HaplotypeScore=289.0727;InbreedingCoeff=0.4934;MQ=55.88;MQ0=6;MQRankSum=-0.451;QD=15.18;ReadPosRankSum=1.414;VQSLOD=3.2294;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:19:0.81:1,0,182	1/1:1,9:10:20.97:280,21,0	0/0:44,0:28:72.13:0,72,1096	0/0:50,0:29:47.81:0,48,858	0/0:24,0:24:60.21:0,60,1025	0/0:20,0:20:42.42:0,42,489	0/0:45,0:47:46.56:0,47,719	0/0:39,0:34:8.60:0,9,674	0/0:53,0:54:99:0,138,2332	1/1:17,30:47:99:1459,111,0	1/1:4,23:27:66.22:879,66,0	0/0:50,0:50:99:0,135,2268	0/0:32,0:32:78.18:0,78,1290	0/0:36,0:36:99:0,102,1714	0/0:38,0:38:99:0,107,1766	0/0:35,0:35:93.32:0,93,1604	1/1:7,17:24:62.68:783,63,0	1/1:4,30:36:61.54:1022,62,0	0/0:13,0:12:3.71:0,4,213	0/1:36,1:38:44.91:45,0,353	0/1:30,0:36:2.41:2,0,138	0/0:45,0:47:4.37:0,4,371	0/0:33,0:35:25.53:0,26,447	0/0:52,0:51:99:0,138,2316	0/0:29,0:29:78.27:0,78,1341	0/1:36,0:37:62.98:63,0,606	0/1:15,0:16:9.38:9,0,169	0/1:4,0:4:12.72:13,0,60
chr10	87358136	.	ACACT	A	2853.79	PASS	AB=0.775;AC=12;AF=0.214;AN=56;BaseQRankSum=12.307;DP=945;FS=67.851;HRun=0;HaplotypeScore=338.5104;InbreedingCoeff=-0.2715;MQ=52.54;MQ0=5;MQRankSum=-12.853;QD=8.22;ReadPosRankSum=-3.721;VQSLOD=0.2402;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,5:15:97.50:97,0,159	0/0:14,0:14:36.12:0,36,954	0/0:31,0:18:46.72:0,47,1002	0/0:42,0:27:69.29:0,69,1575	0/0:22,0:22:66.23:0,66,1748	0/1:14,8:21:99:346,0,417	0/1:26,8:34:99:133,0,468	0/1:21,11:27:99:398,0,476	0/0:50,0:50:99:0,150,3803	0/0:55,0:55:99:0,147,3709	0/0:22,0:22:63.20:0,63,1540	0/0:59,0:59:99:0,163,4311	0/0:23,0:23:63.10:0,63,1693	0/0:42,0:42:99:0,120,3016	0/0:45,0:45:99:0,122,3134	0/0:41,0:41:99:0,115,2968	0/0:26,0:25:38.04:0,38,1588	0/0:38,0:38:93.23:0,93,2056	0/1:14,0:12:13.39:13,0,393	0/1:22,16:38:91.97:358,0,92	0/1:32,2:34:67.66:68,0,150	0/1:40,20:57:99:211,0,452	0/1:25,15:40:99:185,0,315	0/0:56,0:56:99:0,151,3726	0/0:32,0:32:81.26:0,81,2094	0/1:19,15:34:99:722,0,560	0/1:10,8:18:53.15:340,0,53	0/1:4,2:6:99:134,0,114
chr10	87358140	.	TCACACTCACATA	T	1655.63	PASS	AB=0.983;AC=15;AF=0.268;AN=56;BaseQRankSum=13.321;DP=926;FS=12.162;HRun=0;HaplotypeScore=447.2674;InbreedingCoeff=0.4707;MQ=51.97;MQ0=6;MQRankSum=-13.403;QD=5.91;ReadPosRankSum=-4.597;VQSLOD=-0.4172;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,1:14:12.96:103,13,0	0/0:13,0:13:33.11:0,33,1515	0/0:32,0:16:2.30:0,2,794	0/0:42,0:25:24.69:0,25,1285	0/0:23,0:23:69.24:0,69,3131	0/1:21,0:20:63.72:64,0,163	0/1:32,0:32:21.61:22,0,193	1/1:31,1:27:37.76:401,38,0	0/0:51,0:51:99:0,141,6785	0/0:53,0:53:99:0,135,6724	0/0:23,0:23:57.20:0,57,2692	0/0:62,0:62:99:0,166,8512	0/0:25,0:25:67.49:0,67,2988	0/0:40,0:40:99:0,108,5272	0/0:45,0:45:99:0,101,5613	0/0:47,0:47:75.73:0,76,5688	0/0:27,0:26:68.71:0,69,2002	0/0:35,0:35:14.31:0,14,3514	0/0:10,0:9:0.47:0,0,1	1/1:30,4:34:23.61:141,24,0	0/0:32,0:34:5.86:0,6,70	0/1:56,0:54:34.68:35,0,241	0/1:37,0:37:38.54:39,0,98	0/0:54,0:54:99:0,132,6346	0/0:29,0:29:78.27:0,78,3751	0/1:29,3:32:99:744,0,112	1/1:15,0:16:20.17:225,20,0	1/1:5,1:6:8.72:63,9,0
chr10	87358141	.	CACACTCACAT	C	3713.94	PASS	AB=0.993;AC=14;AF=0.250;AN=56;BaseQRankSum=14.158;DP=933;FS=20.434;HRun=0;HaplotypeScore=416.0533;InbreedingCoeff=-0.0733;MQ=51.76;MQ0=6;MQRankSum=-13.377;QD=10.09;ReadPosRankSum=-3.715;VQSLOD=0.4805;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:27.30:114,0,27	0/0:13,0:13:36.10:0,36,1552	0/0:31,0:15:38.81:0,39,1022	0/0:42,0:26:65.93:0,66,1738	0/0:23,0:23:69.24:0,69,3049	0/1:22,0:21:99:378,0,274	0/1:33,0:33:99:170,0,341	0/1:32,0:27:99:424,0,119	0/0:50,0:50:99:0,144,6527	0/0:54,0:54:99:0,147,6572	0/0:23,0:23:63.22:0,63,2739	0/0:62,0:62:99:0,172,8157	0/0:26,0:26:73.98:0,74,3113	0/0:40,0:40:99:0,111,5087	0/0:45,0:45:99:0,101,5455	0/0:45,1:46:34.70:0,35,5302	0/0:27,0:26:72.01:0,72,2248	0/1:32,2:35:88.91:89,0,3515	0/1:10,0:9:41.96:42,0,127	0/1:34,0:34:0.55:393,0,1	0/1:37,1:37:15.01:15,0,117	0/1:56,0:54:99:213,0,364	0/1:37,0:37:99:213,0,178	0/0:54,0:54:99:0,138,6153	0/0:29,0:29:84.29:0,84,3576	0/1:34,0:34:99:1123,0,198	1/1:17,0:17:23.69:419,24,0	0/1:6,0:6:25.74:121,0,26
chr10	87358147	.	CACAT	C	3164.12	PASS	AB=0.734;AC=16;AF=0.286;AN=56;BaseQRankSum=13.784;DP=901;FS=36.167;HRun=0;HaplotypeScore=316.7342;InbreedingCoeff=0.2913;MQ=51.51;MQ0=7;MQRankSum=-12.668;QD=10.73;ReadPosRankSum=-2.831;VQSLOD=1.4974;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,5:11:11.38:142,11,0	0/0:13,0:13:36.12:0,36,869	0/0:32,0:13:1.56:0,2,542	0/0:40,0:24:63.05:0,63,1256	0/0:24,0:24:72.14:0,72,1716	0/1:13,8:20:99:442,0,202	0/1:24,7:31:99:182,0,129	1/1:16,11:21:21.25:328,21,0	0/0:49,0:49:99:0,144,3612	0/0:54,0:54:99:0,154,3914	0/0:23,0:23:66.21:0,66,1649	0/0:65,0:65:99:0,184,4723	0/0:30,0:30:84.17:0,84,1956	0/0:39,0:39:99:0,111,2858	0/0:49,0:49:99:0,135,3496	0/0:44,0:44:91.29:0,91,3068	0/0:29,0:28:49.12:0,49,1488	0/0:35,0:35:19.08:0,19,2057	1/1:6,1:6:6.02:108,6,0	1/1:14,16:30:23.65:404,24,0	0/1:30,3:31:15.12:27,0,15	0/1:37,18:53:99:194,0,286	0/1:18,14:32:99:197,0,101	0/0:49,0:49:99:0,132,3234	0/0:31,0:31:84.27:0,84,2107	0/1:13,15:29:49.08:879,0,49	0/1:7,8:15:13.41:333,0,13	0/1:2,2:4:2.53:104,0,3
chr10	87358163	.	CTCACAT	C	576.52	PASS	AB=0.873;AC=7;AF=0.125;AN=56;BaseQRankSum=8.465;DP=943;FS=9.990;HRun=0;HaplotypeScore=380.5530;InbreedingCoeff=-0.1613;MQ=50.19;MQ0=8;MQRankSum=-8.461;QD=2.67;ReadPosRankSum=-4.281;VQSLOD=0.4944;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,1:17:3.13:3,0,185	0/0:12,0:12:33.11:0,33,1100	0/0:36,0:18:44.41:0,44,759	0/0:29,0:17:2.07:0,2,643	0/0:20,0:20:60.18:0,60,1940	0/1:20,2:21:99:128,0,287	0/1:29,8:37:99:200,0,143	0/0:34,0:28:30.34:0,30,435	0/0:53,0:53:99:0,133,4668	0/0:57,0:57:99:0,165,5115	0/0:21,0:21:63.22:0,63,1969	0/0:69,0:69:99:0,198,6363	0/0:33,0:33:94.51:0,95,2917	0/0:37,0:37:99:0,108,3549	0/0:50,0:50:99:0,146,4453	0/0:45,0:45:99:0,135,4104	0/0:31,0:31:0.41:0,0,1404	0/0:40,0:40:99:0,105,2870	0/0:8,0:6:15.05:0,15,297	0/0:36,0:36:30.09:0,30,402	0/1:34,7:38:77.16:166,0,77	0/1:38,18:54:99:176,0,289	0/1:21,6:27:6.75:7,0,35	0/0:48,0:48:99:0,126,3867	0/0:26,0:26:78.24:0,78,2633	0/0:36,0:35:51.03:0,51,841	0/1:16,0:16:16.29:16,0,100	0/0:5,0:5:1.48:0,1,41
chr10	87358182	.	A	ACACT	8830.71	PASS	AB=0.954;AC=19;AF=0.339;AN=56;BaseQRankSum=-9.202;DP=937;FS=0.345;HRun=0;HaplotypeScore=318.5044;InbreedingCoeff=0.2897;MQ=54.57;MQ0=10;MQRankSum=0.797;QD=21.13;ReadPosRankSum=0.754;VQSLOD=3.6187;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:13.23:0,13,169	1/1:9,4:13:35.89:654,36,0	0/0:41,0:17:44.74:0,45,560	0/0:37,0:23:52.29:0,52,612	0/0:19,0:19:51.12:0,51,810	0/1:20,0:19:18.55:19,0,317	0/1:39,0:41:30.18:30,0,294	0/1:29,0:29:99:109,0,303	0/0:48,0:48:99:0,133,2259	1/1:8,47:56:99:3294,141,0	1/1:9,8:17:48.15:1151,48,0	0/0:61,0:61:99:0,147,2397	0/0:36,0:36:99:0,99,1667	0/0:33,0:33:90.25:0,90,1468	0/0:44,0:44:99:0,123,2092	0/0:47,0:47:99:0,118,2173	1/1:18,16:33:27.42:1510,27,0	1/1:17,20:37:42.08:1853,42,0	0/1:14,0:12:33.77:34,0,244	0/0:40,0:40:25.91:0,26,422	0/1:42,0:38:7.92:8,0,191	0/1:47,0:45:9.74:10,0,280	0/0:22,0:22:9.97:0,10,144	0/0:46,0:46:99:0,117,1832	0/0:24,0:24:63.16:0,63,1040	0/1:35,1:36:85.04:85,0,701	0/1:14,0:15:39.08:39,0,193	0/1:10,0:11:34.76:35,0,130
chr10	87358189	.	C	CAT	2376.10	PASS	AB=0.972;AC=16;AF=0.286;AN=56;BaseQRankSum=10.735;DP=984;FS=67.690;HRun=0;HaplotypeScore=313.9953;InbreedingCoeff=0.3654;MQ=55.78;MQ0=11;MQRankSum=-9.865;QD=6.77;ReadPosRankSum=-1.218;VQSLOD=1.0314;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:3.58:80,0,4	0/0:16,0:16:19.72:0,20,227	0/0:46,0:25:71.03:0,71,824	0/0:44,0:28:41.41:0,41,748	0/0:21,0:21:60.14:0,60,838	0/1:19,1:19:7.16:158,0,7	1/1:41,2:43:23.99:358,24,0	0/1:32,1:30:56.10:450,0,56	0/0:50,0:50:99:0,138,2073	0/0:62,0:62:99:0,113,823	0/0:21,0:21:45.45:0,45,296	0/0:58,0:58:99:0,162,2355	0/0:39,0:39:99:0,108,1577	0/0:32,0:32:87.26:0,87,1285	0/0:49,0:49:99:0,141,2017	0/0:47,0:48:99:0,141,2024	0/0:38,0:37:47.46:0,47,309	0/0:36,0:36:50.85:0,51,277	1/1:18,2:17:15.07:407,15,0	1/1:37,0:37:25.65:223,26,0	0/1:41,0:37:13.17:57,0,13	0/1:42,2:41:65.93:124,0,66	0/1:24,3:27:9.59:53,0,10	0/0:49,0:49:99:0,132,1809	0/0:24,0:24:66.21:0,66,986	0/1:34,0:34:6.59:452,0,7	0/1:18,0:18:21.71:85,0,22	1/1:11,0:11:7.07:107,7,0
chr10	87358198	.	TTA	T	98.24	PASS	AB=0.896;AC=4;AF=0.071;AN=56;BaseQRankSum=8.299;DP=974;FS=56.405;HRun=0;HaplotypeScore=302.6797;InbreedingCoeff=-0.0716;MQ=57.69;MQ0=10;MQRankSum=-7.873;QD=0.95;ReadPosRankSum=-3.002;VQSLOD=0.4495;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:29.38:0,29,309	0/0:12,0:12:22.66:0,23,562	0/0:49,0:32:57.64:0,58,1440	0/0:56,0:37:15.11:0,15,1101	0/0:19,0:19:57.20:0,57,1127	0/0:24,1:24:12.89:0,13,633	0/0:37,3:40:57.25:0,57,1148	0/0:33,1:32:38.95:0,39,1432	0/0:50,0:50:99:0,146,2888	0/0:65,0:65:99:0,189,3534	0/0:21,0:21:60.31:0,60,1120	0/0:51,0:51:99:0,150,2986	0/0:39,0:39:99:0,117,2345	0/0:27,0:27:81.28:0,81,1611	0/0:52,0:52:99:0,157,3106	0/0:47,0:47:99:0,141,2747	0/0:33,0:34:88.24:0,88,1572	0/0:34,0:34:75.80:0,76,1830	0/0:18,0:17:45.08:0,45,788	0/0:32,4:36:47.67:0,48,756	0/0:37,2:36:20.29:0,20,500	0/1:27,12:37:48.07:48,0,720	0/0:21,5:26:35.08:0,35,480	0/0:46,0:46:99:0,129,2504	0/0:25,0:25:75.26:0,75,1489	0/1:30,2:32:70.46:70,0,1285	0/1:18,1:19:79.02:79,0,394	0/1:12,1:13:2.63:3,0,545
chr10	87358233	.	C	CACACACACACTA	8692.07	PASS	AB=0.824;AC=20;AF=0.357;AN=56;BaseQRankSum=2.996;DP=977;FS=83.995;HRun=0;HaplotypeScore=390.6143;InbreedingCoeff=0.6767;MQ=54.37;MQ0=12;MQRankSum=-10.922;QD=23.49;ReadPosRankSum=-5.346;VQSLOD=-0.1712;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:28.38:212,0,28	0/0:11,0:11:27.09:0,27,943	0/0:45,0:27:23.93:0,24,259	0/0:54,0:34:29.39:0,29,393	0/0:18,0:18:45.12:0,45,1316	0/1:27,2:29:52.12:1225,0,52	1/1:48,0:48:9.20:779,9,0	1/1:52,0:49:53.98:791,54,0	0/0:47,0:47:99:0,115,2982	0/0:61,0:61:99:0,120,3248	0/0:10,0:10:18.05:0,18,553	0/0:46,0:46:96.09:0,96,2820	0/0:48,0:48:99:0,102,2615	0/0:26,0:26:60.10:0,60,1382	0/0:52,0:52:99:0,111,3262	0/0:47,0:47:99:0,102,2961	0/0:42,0:42:65.75:0,66,1700	0/0:33,0:33:75:0,75,1965	1/1:22,0:20:20.90:349,21,0	0/1:19,17:38:25.94:190,0,26	1/1:44,1:44:21.65:353,22,0	1/1:32,2:33:41.03:897,41,0	1/1:25,1:27:44.59:841,45,0	0/0:47,0:46:99:0,109,3398	0/0:20,0:20:24.90:0,25,1016	0/1:14,11:25:86.86:1226,0,87	1/1:11,2:13:25.22:797,25,0	1/1:9,2:11:32.92:1031,33,0
chr10	87358283	.	T	TACAC	4807.62	PASS	AB=0.756;AC=23;AF=0.411;AN=56;BaseQRankSum=3.664;DP=987;FS=0.779;HRun=0;HaplotypeScore=247.4726;InbreedingCoeff=0.6683;MQ=50.48;MQ0=18;MQRankSum=-2.783;QD=10.64;ReadPosRankSum=-5.006;VQSLOD=3.3953;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:18.53:0,19,281	1/1:8,0:14:13.67:61,14,0	0/0:43,0:17:8.05:0,8,82	0/1:52,0:24:0.35:0,0,39	0/0:21,0:22:32.73:0,33,441	0/1:26,0:26:59.36:59,0,273	0/0:42,0:46:29.89:0,30,591	1/1:39,0:38:30.29:459,30,0	0/0:38,0:38:59.74:0,60,937	1/1:35,0:50:22.19:330,22,0	0/1:6,0:16:28.65:54,0,29	0/0:47,0:49:72.10:0,72,1073	0/0:40,0:40:72.10:0,72,1070	0/0:32,0:37:84.03:0,84,1236	0/0:41,0:42:63.03:0,63,956	0/0:50,0:50:99:0,114,1744	0/1:13,0:40:26.47:240,0,26	1/1:18,0:30:17.28:185,17,0	1/1:11,6:19:23.80:469,24,0	1/1:17,11:29:17.78:381,18,0	0/1:18,40:75:2.84:742,0,3	0/0:40,0:41:44.95:0,45,642	0/0:22,0:23:20.91:0,21,333	0/0:47,0:46:65.99:0,66,1031	0/0:21,0:20:21.05:0,21,337	1/1:23,6:34:58.72:828,59,0	1/1:8,13:22:30.10:711,30,0	1/1:1,4:5:12.04:288,12,0
chr10	87358689	.	GGTGTGT	G	46.37	PASS	AB=0.929;AC=11;AF=0.289;AN=38;BaseQRankSum=3.220;DP=532;FS=6.763;HRun=0;HaplotypeScore=113.0933;InbreedingCoeff=0.4820;MQ=69.39;MQ0=8;MQRankSum=-2.560;QD=0.31;ReadPosRankSum=1.040;VQSLOD=1.7617;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/0:13,0:13:9.01:0,9,209	1/1:16,0:15:0.89:2,1,0	0/1:24,0:26:0:0,0,0	./.	0/0:17,0:17:12.04:0,12,334	0/0:18,0:17:2.60:0,3,6	./.	0/0:20,0:20:24.04:0,24,427	0/0:13,0:12:12:0,12,249	0/0:22,0:21:15.02:0,15,260	0/0:20,0:20:11.99:0,12,166	0/0:9,0:9:9.03:0,9,264	0/0:21,2:22:2.97:0,3,20	1/1:21,5:26:2.90:59,3,0	./.	0/0:13,0:13:0.43:0,0,1	1/1:46,0:44:0.47:1,0,0	./.	0/0:11,3:14:3.47:0,3,26	0/0:39,0:37:39.12:0,39,893	0/0:10,0:10:3:0,3,25	1/1:19,0:21:3.01:42,3,0	1/1:12,0:13:2.64:41,3,0	./.
chr10	87359210	.	GACAC	G	37.24	PASS	AB=0.784;AC=6;AF=0.115;AN=52;BaseQRankSum=2.622;DP=327;FS=7.880;HRun=0;HaplotypeScore=168.2474;InbreedingCoeff=0.3402;MQ=36.95;MQ0=2;MQRankSum=-0.774;QD=0.74;ReadPosRankSum=-1.109;VQSLOD=1.9458;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:2.15:0,2,70	0/0:7,0:6:3.01:0,3,38	./.	./.	0/0:18,0:18:13.24:0,13,239	0/1:5,16:21:3.96:36,0,4	1/1:5,3:8:0.84:5,1,0	0/0:12,0:12:20.86:0,21,324	0/0:12,0:12:6.70:0,7,203	0/0:11,0:11:16.02:0,16,277	0/0:9,0:8:6.02:0,6,103	0/0:15,0:15:23.57:0,24,467	0/0:9,0:10:11.43:0,11,181	0/1:10,0:10:0.18:0,0,1	0/0:9,0:12:12.91:0,13,240	0/0:12,0:15:7.54:0,8,290	0/0:16,0:15:3.01:0,3,34	0/0:9,0:9:18.03:0,18,294	0/0:9,0:9:11.25:0,11,165	0/0:7,0:7:3.01:0,3,51	0/0:14,0:12:12.04:0,12,206	1/1:6,5:11:7.58:93,8,0	0/0:4,1:5:2.86:0,3,25	0/0:10,0:11:3.93:0,4,73	0/0:12,0:12:8.75:0,9,109	0/0:21,0:21:53.52:0,54,889	0/0:20,0:19:25.45:0,25,452	0/0:5,0:5:9.03:0,9,176
chr10	87359550	.	C	CT	2632.28	PASS	AB=1.000;AC=25;AF=0.463;AN=54;BaseQRankSum=5.376;DP=185;FS=0.000;HRun=6;HaplotypeScore=44.6379;InbreedingCoeff=0.5670;MQ=72.16;MQ0=1;MQRankSum=-0.944;QD=19.07;ReadPosRankSum=0.930;VQSLOD=2.7834;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,5:7:9.02:101,9,0	1/1:3,3:6:0.24:83,0,0	0/0:7,0:4:2.92:0,3,21	0/1:15,0:9:8.11:8,0,17	0/0:6,0:6:9.81:0,10,145	0/0:8,0:8:0.21:0,0,24	0/0:1,0:1:2.99:0,3,24	1/1:12,14:26:62.54:573,63,0	0/0:4,0:4:12.01:0,12,115	1/1:1,3:4:9.02:98,9,0	1/1:7,2:9:8.49:87,8,0	0/0:2,0:2:3:0,3,25	0/0:1,0:1:3.01:0,3,31	0/0:1,0:1:3.01:0,3,31	0/0:2,0:2:3.01:0,3,31	0/0:1,0:1:3.01:0,3,31	1/1:4,8:12:20.41:293,20,0	1/1:2,3:5:4.74:120,5,0	1/1:7,11:18:47.32:465,47,0	1/1:3,2:5:9.02:88,9,0	./.	0/0:2,0:2:5.82:0,6,33	0/0:1,0:1:2.50:0,2,9	0/0:3,0:3:6.01:0,6,61	0/0:7,0:7:21.05:0,21,214	1/1:0,4:4:12.03:129,12,0	1/1:1,9:9:27.07:297,27,0	1/1:5,12:17:42.11:467,42,0
chr10	87359561	.	A	AAT	5197.61	PASS	AB=0.649;AC=27;AF=0.519;AN=52;BaseQRankSum=4.271;DP=224;FS=0.000;HRun=0;HaplotypeScore=43.6843;InbreedingCoeff=0.4745;MQ=68.28;MQ0=1;MQRankSum=-3.095;QD=31.31;ReadPosRankSum=1.269;VQSLOD=5.7764;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:17.97:268,18,0	0/1:2,0:5:55.17:99,0,55	0/0:9,0:5:3.37:0,3,67	0/0:11,0:4:6.45:0,6,24	0/0:7,0:7:20.28:0,20,276	1/1:0,0:10:14.97:122,15,0	./.	1/1:8,22:30:61.75:1044,62,0	0/0:4,0:4:12.04:0,12,179	0/1:3,0:6:11.72:145,0,12	0/1:5,0:8:20.24:107,0,20	./.	0/0:2,0:2:6.02:0,6,90	0/0:4,0:4:9.03:0,9,133	0/0:2,0:2:6.02:0,6,90	0/0:3,0:3:9.02:0,9,117	0/1:3,2:14:34.98:354,0,35	0/1:3,0:6:23.17:140,0,23	1/1:4,18:23:65.90:960,66,0	1/1:5,3:8:20.89:233,21,0	1/1:3,0:2:3.01:42,3,0	1/1:0,0:3:8.92:66,9,0	1/1:2,0:3:8.92:67,9,0	0/0:4,0:4:12.04:0,12,179	0/0:11,0:11:33.09:0,33,441	1/1:1,4:7:18.04:260,18,0	1/1:0,12:11:33.11:549,33,0	1/1:7,12:19:48.13:741,48,0
chr10	87360209	.	G	GGGA	2122.57	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-5.758;DP=330;FS=14.342;HRun=0;HaplotypeScore=60.2855;InbreedingCoeff=0.8613;MQ=72.24;MQ0=4;MQRankSum=-1.654;QD=18.46;ReadPosRankSum=1.555;VQSLOD=2.0787;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:17:11.58:134,12,0	0/0:10,0:10:20.96:0,21,177	0/0:20,0:13:31.67:0,32,291	0/0:16,0:11:20.22:0,20,151	0/0:6,0:6:6.47:0,6,52	0/0:2,0:2:2.98:0,3,21	0/0:22,0:21:44.96:0,45,399	1/1:6,12:20:20.49:359,20,0	0/0:5,0:5:11.98:0,12,118	0/0:5,0:5:8.92:0,9,64	0/0:7,0:7:17.97:0,18,149	0/0:8,0:8:18.01:0,18,158	0/0:6,0:6:18:0,18,156	0/0:8,0:8:18.02:0,18,185	0/0:11,0:10:20.94:0,21,171	0/0:8,0:8:11.96:0,12,96	0/0:21,0:20:35.99:0,36,324	0/0:22,0:21:39.93:0,40,370	1/1:3,8:14:24.90:448,25,0	1/1:3,2:8:18.42:230,18,0	1/1:5,14:23:8:195,8,0	0/0:10,0:10:23.92:0,24,198	0/0:8,0:8:14.59:0,15,137	0/0:13,0:13:26.97:0,27,231	0/0:7,0:7:9.47:0,9,80	1/1:2,10:13:5.94:405,6,0	1/1:4,9:12:14.92:287,15,0	1/1:2,5:7:7.09:257,7,0
chr10	87361684	.	C	CTAGT	23695.89	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-15.543;DP=703;FS=13.160;HRun=0;HaplotypeScore=102.9757;InbreedingCoeff=0.9998;MQ=73.33;MQ0=0;MQRankSum=-8.324;QD=69.08;ReadPosRankSum=1.385;VQSLOD=6.6071;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,49:57:99:3581,129,0	0/0:9,0:9:27.09:0,27,539	0/0:14,0:14:41.97:0,42,753	0/0:15,0:15:39.13:0,39,717	0/0:20,0:20:54.18:0,54,1078	1/1:2,21:25:63.22:1762,63,0	1/1:4,17:23:63.18:1643,63,0	1/1:5,23:30:87.30:2337,87,0	0/0:24,0:24:69.22:0,69,1342	0/0:33,0:33:99:0,99,1911	0/0:18,0:18:51.17:0,51,1018	0/0:33,0:33:96.33:0,96,1917	0/0:25,0:25:75.26:0,75,1483	0/0:21,0:21:63.19:0,63,1189	0/0:22,0:22:66.21:0,66,1282	0/0:16,0:16:48.16:0,48,950	0/0:44,0:44:99:0,129,2522	0/0:21,0:21:60.16:0,60,1138	1/1:4,20:26:72.22:1840,72,0	1/1:4,24:29:78.22:2051,78,0	1/1:4,21:27:60.16:1553,60,0	1/1:4,19:24:63.22:1694,63,0	1/1:4,13:19:42.14:1122,42,0	0/0:20,0:20:60.19:0,60,1154	0/0:25,0:25:75.26:0,75,1480	1/1:6,34:42:54.46:2914,54,0	1/1:6,22:28:81.27:2193,81,0	1/1:0,12:12:36.12:1006,36,0
chr10	87362219	.	CTTTT	C	5027.41	PASS	AB=0.611;AC=17;AF=0.304;AN=56;BaseQRankSum=0.249;DP=586;FS=0.000;HRun=15;HaplotypeScore=115.5552;InbreedingCoeff=0.9040;MQ=63.86;MQ0=1;MQRankSum=-4.677;QD=21.76;ReadPosRankSum=5.641;VQSLOD=3.5816;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,34:39:70.76:944,71,0	0/0:1,0:7:9.75:0,10,65	0/0:11,0:8:17.54:0,18,226	0/0:17,1:15:24.86:0,25,277	0/0:21,0:23:45.94:0,46,821	0/0:6,0:20:24.92:0,25,159	0/1:8,1:22:29.15:29,0,145	1/1:10,22:32:66:877,66,0	0/0:14,0:17:41.69:0,42,858	0/0:7,0:18:40.70:0,41,321	0/0:4,0:12:29.37:0,29,178	0/0:20,0:22:60.12:0,60,1130	0/0:13,0:16:33.09:0,33,583	0/0:16,0:20:48.04:0,48,843	0/0:18,0:22:63.21:0,63,1272	0/0:18,0:20:42.03:0,42,749	0/0:12,0:28:40.01:0,40,430	0/0:8,0:26:46.21:0,46,380	1/1:9,7:16:20.80:265,21,0	1/1:10,13:23:35.06:489,35,0	1/1:6,18:26:50.48:660,50,0	0/0:5,0:16:26.30:0,26,152	0/0:5,0:11:20.56:0,21,125	0/0:17,0:21:51.09:0,51,1032	0/0:17,0:22:60.13:0,60,1104	1/1:9,15:25:30.82:579,31,0	1/1:11,20:31:52.87:734,53,0	1/1:2,15:17:33.04:450,33,0
chr10	87362495	.	A	AG	1395.29	PASS	AB=0.979;AC=18;AF=0.321;AN=56;BaseQRankSum=-3.653;DP=435;FS=69.724;HRun=0;HaplotypeScore=77.9555;InbreedingCoeff=0.5485;MQ=56.45;MQ0=20;MQRankSum=4.108;QD=7.71;ReadPosRankSum=3.681;VQSLOD=1.0564;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:0.26:7,0,0	0/0:11,0:9:18.42:0,18,124	0/0:24,0:8:10.96:0,11,106	0/0:20,0:7:11.24:0,11,75	0/0:18,0:18:34.05:0,34,220	0/1:17,0:17:4.93:213,0,5	0/1:12,0:11:11.12:120,0,11	1/1:16,14:30:12.21:276,12,0	0/0:12,0:12:26.02:0,26,185	0/0:27,0:26:61.10:0,61,410	0/0:19,0:18:34.63:0,35,221	0/0:13,0:13:31.56:0,32,245	0/0:13,0:13:32.63:0,33,211	0/0:15,0:13:22.87:0,23,182	0/0:10,0:10:20.85:0,21,175	0/0:15,0:15:34.40:0,34,231	0/0:17,0:15:33.23:0,33,203	0/0:12,0:12:21.11:0,21,133	0/1:17,0:16:0.35:196,0,0	1/1:17,1:18:40.21:253,40,0	1/1:6,0:5:11.48:65,11,0	0/1:9,0:9:16.28:83,0,16	0/1:10,0:10:1.80:83,0,2	0/0:7,0:6:5.30:0,5,42	0/0:21,0:21:16.81:0,17,267	1/1:5,9:13:20.23:166,20,0	1/1:19,0:18:20.78:103,21,0	0/1:6,1:6:9.05:15,0,9
chr10	87364128	.	AAG	A	46.35	PASS	AB=0.883;AC=8;AF=0.148;AN=54;BaseQRankSum=1.278;DP=150;FS=2.321;HRun=0;HaplotypeScore=30.3399;InbreedingCoeff=-0.1831;MQ=29.25;MQ0=14;MQRankSum=-2.942;QD=0.93;ReadPosRankSum=2.411;VQSLOD=1.1438;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:13.58:0,14,161	0/0:1,0:1:2.94:0,3,18	0/1:4,0:1:0:0,0,0	./.	0/1:5,3:8:10.27:10,0,163	0/1:7,0:7:6.38:6,0,196	0/0:12,0:2:3.01:0,3,53	0/0:22,0:2:6.02:0,6,68	0/0:3,0:3:6.02:0,6,94	0/0:6,0:4:10.11:0,10,116	0/0:5,2:6:2.76:0,3,37	0/0:2,0:2:3.01:0,3,58	0/0:5,0:5:12.04:0,12,213	0/0:4,0:4:12.04:0,12,201	0/0:3,0:3:9.03:0,9,169	0/0:6,0:6:10.85:0,11,177	0/0:2,0:1:3.01:0,3,58	0/0:3,0:3:6:0,6,78	0/0:7,0:7:19.79:0,20,214	0/1:3,0:2:5.53:6,0,31	0/0:1,0:1:3.01:0,3,40	0/1:6,3:9:71.45:71,0,150	0/1:6,1:4:17.12:17,0,45	0/0:2,1:2:3:0,3,31	0/1:7,0:7:10.19:10,0,77	0/1:3,2:5:38.43:38,0,114	0/0:1,0:1:3.01:0,3,53	0/0:7,0:6:15.05:0,15,247
chr10	87364176	.	AAGCAGCAGCAGCAGC	A	6087.60	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=0.903;DP=344;FS=4.494;HRun=0;HaplotypeScore=132.2922;InbreedingCoeff=0.3352;MQ=45.20;MQ0=18;MQRankSum=-4.712;QD=36.67;ReadPosRankSum=-2.743;VQSLOD=3.7574;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:13:86.55:87,0,165	0/0:4,0:4:12.02:0,12,211	0/0:12,0:6:18.04:0,18,652	0/0:9,0:6:18.06:0,18,607	0/0:14,0:13:15.05:0,15,619	0/1:16,0:13:26.70:547,0,27	1/1:19,0:10:24.01:702,24,0	1/1:13,20:26:59.09:1071,59,0	0/0:11,0:10:24.08:0,24,1070	0/0:16,0:13:33.84:0,34,465	0/0:8,0:6:2.92:0,3,17	0/0:7,0:7:18.06:0,18,882	0/0:12,0:12:33.11:0,33,1452	0/0:8,0:8:18.06:0,18,904	0/0:11,0:11:30.10:0,30,1429	0/0:10,0:10:24.08:0,24,1176	0/0:13,0:12:35.80:0,36,420	0/0:11,0:11:23.85:0,24,305	1/1:7,9:13:12.55:410,13,0	0/1:6,0:6:32.75:393,0,33	1/1:6,0:6:3.01:122,3,0	0/1:12,0:11:43.81:628,0,44	1/1:13,0:10:18.06:498,18,0	0/0:16,0:15:39.13:0,39,1662	0/0:16,0:15:15.05:0,15,675	0/1:11,0:11:30.96:791,0,31	0/1:8,0:8:17.74:561,0,18	0/1:12,0:11:99:280,0,248
chr10	87364179	.	C	CAGA	1717.23	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=6.983;DP=349;FS=5.255;HRun=0;HaplotypeScore=85.8313;InbreedingCoeff=0.6618;MQ=46.41;MQ0=14;MQRankSum=-1.639;QD=9.81;ReadPosRankSum=-0.961;VQSLOD=2.4478;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:12:7.47:66,7,0	1/1:4,0:4:12.04:193,12,0	0/0:15,0:9:21:0,21,278	0/0:13,0:9:13.84:0,14,193	0/1:14,0:13:13.01:13,0,215	1/1:14,0:11:5.32:34,5,0	1/1:19,0:10:5.88:38,6,0	0/0:27,0:26:24.96:0,25,146	0/0:12,0:11:24.05:0,24,361	1/1:17,0:14:40.99:507,41,0	1/1:1,7:6:5.69:30,6,0	0/0:7,0:7:18.06:0,18,285	0/0:13,0:13:34.19:0,34,458	0/0:9,0:9:16.26:0,16,270	0/0:11,0:11:30.02:0,30,437	0/0:10,0:10:24.02:0,24,310	1/1:14,0:13:36.11:564,36,0	1/1:11,0:11:27.01:372,27,0	0/0:16,0:13:15.65:0,16,89	1/1:6,0:6:3.06:12,3,0	0/1:8,0:8:0:1,0,0	0/0:10,0:9:1.58:0,2,11	1/1:12,0:9:3.64:21,4,0	0/0:16,0:15:39.13:0,39,609	0/0:15,0:14:17.84:0,18,255	0/1:12,0:12:3.22:35,0,3	1/1:9,0:9:2.92:18,3,0	1/1:14,0:13:0.30:2,0,0
chr10	87364189	.	AGC	A	151.44	PASS	AB=0.961;AC=10;AF=0.179;AN=56;BaseQRankSum=7.502;DP=377;FS=12.548;HRun=0;HaplotypeScore=89.0532;InbreedingCoeff=0.0872;MQ=56.68;MQ0=13;MQRankSum=3.926;QD=1.56;ReadPosRankSum=5.400;VQSLOD=0.2402;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:28.54:0,29,208	0/1:5,0:5:4.87:17,0,5	0/0:22,0:15:45.12:0,45,653	0/0:17,0:13:17.40:0,17,447	0/0:14,0:13:18.06:0,18,334	0/0:14,0:11:4.11:0,4,50	0/0:22,0:15:26.81:0,27,146	0/0:20,0:20:27.69:0,28,253	0/0:13,0:12:30.10:0,30,545	0/1:14,2:14:73.96:76,0,74	0/0:8,0:6:2.04:0,2,6	0/0:10,0:10:24.08:0,24,434	0/0:16,0:16:45.15:0,45,807	0/0:9,0:9:21.07:0,21,395	0/0:12,0:12:33.11:0,33,634	0/0:12,0:12:30.10:0,30,536	0/1:12,4:15:35.18:35,0,52	1/1:8,3:11:0.48:29,0,0	0/1:13,0:10:5.57:6,0,113	0/1:7,0:7:1.84:15,0,2	0/1:9,0:9:1.60:2,0,25	0/1:10,0:9:18.88:19,0,34	0/0:14,0:11:9.36:0,9,77	0/0:17,0:16:42.14:0,42,804	0/0:16,0:15:21.07:0,21,373	0/1:10,0:10:7.38:83,0,7	0/0:10,0:10:6.89:0,7,60	0/0:19,0:18:12.57:0,13,188
chr10	87364468	.	G	GTCTC	17663.42	PASS	AB=0.938;AC=25;AF=0.446;AN=56;BaseQRankSum=-16.687;DP=647;FS=3.121;HRun=0;HaplotypeScore=99.7094;InbreedingCoeff=0.9265;MQ=89.30;MQ0=0;MQRankSum=-6.422;QD=55.03;ReadPosRankSum=3.056;VQSLOD=5.9439;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,28:38:69.24:1792,69,0	0/0:7,0:7:18.06:0,18,305	0/0:24,0:24:66.22:0,66,1136	0/0:31,0:31:47.88:0,48,1269	0/0:30,0:30:87.30:0,87,1529	1/1:4,18:22:48.16:1246,48,0	1/1:1,22:23:51.18:1323,51,0	1/1:13,15:33:66.20:1499,66,0	0/0:17,0:17:51.17:0,51,889	0/0:20,0:20:54.04:0,54,905	0/1:14,1:15:44.58:45,0,475	0/0:21,0:21:63.22:0,63,1131	0/0:24,0:24:66.21:0,66,1144	0/0:14,0:14:39.03:0,39,663	0/0:29,0:29:72.23:0,72,1265	0/0:26,0:26:66.20:0,66,1155	0/0:27,0:27:78.25:0,78,1370	0/0:12,0:12:33.11:0,33,593	1/1:4,18:22:54.17:1348,54,0	1/1:4,11:16:33.11:856,33,0	1/1:2,16:18:42.14:1086,42,0	1/1:2,18:21:48.16:1245,48,0	1/1:1,18:18:36.12:934,36,0	0/0:25,0:25:72.22:0,72,1237	0/0:19,0:19:45.15:0,45,797	1/1:4,23:28:78.25:1933,78,0	1/1:5,35:41:99:2722,105,0	1/1:4,21:25:63.22:1635,63,0
chr10	87364719	.	CT	C	1017.17	PASS	AB=0.825;AC=21;AF=0.375;AN=56;BaseQRankSum=4.676;DP=590;FS=31.820;HRun=16;HaplotypeScore=77.4996;InbreedingCoeff=0.4378;MQ=74.52;MQ0=12;MQRankSum=1.308;QD=3.90;ReadPosRankSum=2.586;VQSLOD=-0.4837;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:22:18.04:52,18,0	0/1:6,1:7:6.01:6,0,64	0/0:53,1:22:6.75:0,7,77	0/0:44,1:22:5.80:0,6,39	0/0:26,2:31:13.95:0,14,331	0/0:26,0:26:35.45:0,35,448	0/0:20,0:20:23.80:0,24,227	1/1:11,11:24:33.23:190,33,0	0/0:9,1:11:2.81:0,3,120	0/1:14,3:17:14.64:15,0,114	0/1:15,3:18:24.08:24,0,138	0/0:18,0:18:12.39:0,12,189	0/1:11,1:12:3.34:3,0,72	0/1:7,3:11:16.41:16,0,51	0/0:11,1:12:11.56:0,12,190	0/0:13,3:16:11.97:0,12,202	0/0:20,3:23:11.62:0,12,187	0/0:18,0:18:23.84:0,24,285	1/1:11,6:18:16.46:94,16,0	1/1:11,19:30:49.61:302,50,0	1/1:4,2:7:8.68:50,9,0	0/0:12,0:14:6.82:0,7,125	0/0:16,1:20:19.15:0,19,230	0/1:9,2:12:0.13:0,0,96	0/0:19,1:21:21.72:0,22,262	1/1:17,13:30:10.99:172,11,0	1/1:5,24:29:29.48:187,29,0	0/1:9,12:23:22.68:92,0,23
chr10	87364908	.	T	TC	8103.59	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=1.489;DP=461;FS=18.741;HRun=6;HaplotypeScore=68.4576;InbreedingCoeff=0.9174;MQ=76.27;MQ0=2;MQRankSum=-0.983;QD=27.47;ReadPosRankSum=-2.340;VQSLOD=2.7286;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:16,13:29:67.02:769,67,0	1/1:2,3:5:2.96:38,3,0	0/0:22,0:19:31.01:0,31,237	0/0:13,0:8:4.04:0,4,57	0/0:14,0:14:29.82:0,30,269	1/1:16,6:22:51.06:577,51,0	1/1:15,14:29:68.81:857,69,0	1/1:8,2:10:6.02:75,6,0	0/0:12,0:12:33.06:0,33,330	1/1:1,8:10:24.08:299,24,0	1/1:7,2:9:15.03:162,15,0	0/0:16,0:16:29.75:0,30,403	0/0:16,0:16:35.68:0,36,360	0/0:10,0:10:27.06:0,27,274	0/0:7,1:8:21.03:0,21,206	0/0:26,0:26:65.93:0,66,649	1/1:2,24:26:57.18:715,57,0	1/1:0,10:10:24.08:302,24,0	1/1:14,12:26:60.17:735,60,0	1/1:5,4:9:20.85:249,21,0	1/1:31,10:41:96.61:1153,97,0	1/1:5,3:8:15.95:206,16,0	1/1:9,4:14:33.02:384,33,0	0/0:17,0:17:48.11:0,48,490	0/0:11,0:11:21.02:0,21,206	1/1:10,16:26:78.22:936,78,0	1/1:15,3:18:48.13:570,48,0	1/1:3,0:3:6.02:75,6,0
chr10	87364919	.	AG	A	4111.86	PASS	AB=0.805;AC=24;AF=0.444;AN=54;BaseQRankSum=8.698;DP=483;FS=12.216;HRun=10;HaplotypeScore=82.4327;InbreedingCoeff=0.5951;MQ=76.75;MQ0=2;MQRankSum=-2.410;QD=15.23;ReadPosRankSum=-2.252;VQSLOD=2.1901;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:20,10:30:3.44:413,0,3	./.	0/0:21,0:17:14.63:0,15,143	0/0:18,0:12:8.97:0,9,81	0/1:14,2:16:25.06:25,0,194	1/1:15,5:20:50.64:423,51,0	1/1:20,9:30:63.37:530,63,0	0/1:4,4:9:9.43:82,0,9	0/0:17,0:17:42.07:0,42,443	0/0:13,1:14:7.03:0,7,300	0/1:5,1:6:13.27:13,0,87	0/0:21,0:21:60.14:0,60,648	0/0:14,0:15:38.93:0,39,404	0/0:11,0:11:30.08:0,30,328	0/1:7,1:8:7.99:8,0,148	0/0:23,1:24:34.13:0,34,605	0/0:27,0:28:63:0,63,678	0/0:13,0:13:27.07:0,27,299	1/1:12,7:19:8.80:304,9,0	1/1:6,4:10:23.95:200,24,0	1/1:32,11:43:92.73:775,93,0	1/1:5,5:10:29.95:252,30,0	1/1:12,2:14:29.84:239,30,0	0/0:22,0:22:51.07:0,51,532	0/0:8,0:8:11.98:0,12,133	1/1:20,9:29:18.85:335,19,0	1/1:12,5:17:41.97:358,42,0	0/1:6,3:9:0.40:154,0,0
chr10	87366141	.	TC	T	7607.38	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.544;DP=678;FS=2.649;HRun=1;HaplotypeScore=66.0204;InbreedingCoeff=0.9999;MQ=88.47;MQ0=0;MQRankSum=-1.918;QD=38.04;ReadPosRankSum=2.185;VQSLOD=5.5773;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1648	1/1:0,13:13:36.12:503,36,0	0/0:27,0:27:69.10:0,69,1012	0/0:24,0:24:55.29:0,55,824	0/0:21,0:21:63.21:0,63,1007	1/1:0,22:22:57.19:796,57,0	1/1:0,26:26:66.22:922,66,0	0/0:35,0:35:99:0,105,1650	0/0:24,0:24:72.25:0,72,1147	1/1:0,23:23:69.21:946,69,0	1/1:0,25:25:72.16:981,72,0	0/0:25,0:25:75.26:0,75,1197	0/0:20,0:20:60.20:0,60,957	0/0:25,0:25:75.26:0,75,1194	0/0:23,0:23:69.20:0,69,1043	0/0:23,0:23:69.22:0,69,1080	1/1:0,27:27:75.25:1048,75,0	1/1:0,20:20:48.16:671,48,0	0/0:16,0:16:48.16:0,48,767	0/0:30,0:30:90.31:0,90,1432	0/0:31,0:31:93.32:0,93,1486	1/1:0,23:23:66.09:876,66,0	1/1:0,21:21:63.20:864,63,0	0/0:30,0:30:87.30:0,87,1364	0/0:20,0:20:60.18:0,60,934	0/0:24,1:25:33.27:0,33,1065	0/0:31,0:31:90.29:0,90,1406	0/0:11,0:11:33.11:0,33,527
chr10	87366624	.	A	ACACAC	1080.87	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.323;DP=1209;FS=11.562;HRun=0;HaplotypeScore=221.6472;InbreedingCoeff=0.7432;MQ=44.18;MQ0=95;MQRankSum=-3.825;QD=27.71;ReadPosRankSum=-1.971;VQSLOD=1.9388;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,21:32:44.89:1175,45,0	0/0:18,0:14:23.87:0,24,434	0/0:80,0:11:6.02:0,6,94	0/0:85,0:12:3:0,3,36	0/0:20,0:20:37.37:0,37,697	0/0:43,0:34:32.53:0,33,1006	0/0:87,0:65:99:0,114,1969	0/0:27,0:13:10.24:0,10,247	0/0:31,0:30:66.11:0,66,1215	0/0:64,0:51:99:0,106,1900	0/0:17,0:16:23.41:0,23,449	0/0:45,0:43:85.82:0,86,1668	0/0:32,0:30:67.11:0,67,1251	0/0:43,0:42:75.13:0,75,1435	0/0:35,0:31:51.17:0,51,980	0/0:36,0:36:81.28:0,81,1519	0/0:65,0:57:99:0,114,2083	0/0:47,0:45:95.26:0,95,1671	0/0:23,0:17:30.10:0,30,529	0/0:21,0:21:54.02:0,54,968	0/0:102,0:87:99:0,109,1804	0/0:47,0:36:70.48:0,70,1244	0/0:28,0:25:45.15:0,45,757	0/0:75,0:71:99:0,148,2703	0/0:38,0:36:87.28:0,87,1540	0/0:33,0:26:52.42:0,52,928	0/0:10,0:10:27.07:0,27,475	0/0:11,0:11:18.06:0,18,334
chr10	87366671	.	A	AAC	148.19	PASS	AB=0.989;AC=8;AF=0.148;AN=54;BaseQRankSum=6.688;DP=1113;FS=14.096;HRun=0;HaplotypeScore=167.6223;InbreedingCoeff=0.0300;MQ=41.73;MQ0=157;MQRankSum=-5.415;QD=0.97;ReadPosRankSum=-3.864;VQSLOD=0.8985;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:19:4.74:0,5,141	0/0:15,0:8:9.08:0,9,114	0/0:87,0:5:6.87:0,7,75	./.	0/0:22,0:17:32.44:0,32,416	0/0:56,0:44:5.90:0,6,606	0/0:121,0:85:99:0,116,1634	0/0:31,0:20:20.98:0,21,259	0/0:30,0:27:54.15:0,54,662	0/0:54,2:41:24.37:0,24,751	0/0:21,1:22:25.28:0,25,332	0/0:40,0:35:63.04:0,63,777	0/0:34,0:31:74.51:0,75,887	0/0:25,0:24:30.51:0,31,362	0/0:31,0:28:51.10:0,51,610	0/0:24,0:23:51.16:0,51,630	0/0:52,0:43:61.52:0,62,906	0/1:36,2:30:99:131,0,451	0/1:21,0:15:4.99:5,0,49	0/1:7,0:5:13.68:14,0,14	0/1:53,1:36:45.21:45,0,70	0/0:66,1:52:97.16:0,97,1155	0/0:43,0:34:18.57:0,19,575	0/0:63,1:63:93.06:0,93,1599	0/0:30,0:27:43.36:0,43,519	0/1:20,0:12:54.91:55,0,60	1/1:6,0:5:2.88:15,3,0	0/1:5,0:5:5.52:6,0,30
chr10	87366718	.	CCACA	C	2124.54	PASS	AB=0.932;AC=16;AF=0.286;AN=56;BaseQRankSum=3.667;DP=965;FS=71.289;HRun=0;HaplotypeScore=163.6168;InbreedingCoeff=-0.0520;MQ=40.90;MQ0=130;MQRankSum=-4.477;QD=4.76;ReadPosRankSum=-1.635;VQSLOD=0.0570;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:5:0:0,0,0	0/1:10,0:10:21.89:22,0,55	0/0:72,0:8:6.02:0,6,77	0/0:90,0:4:6.01:0,6,91	0/0:27,0:22:42.14:0,42,823	0/1:29,10:33:48.45:462,0,48	0/1:67,9:52:99:411,0,296	0/1:34,0:16:50.70:51,0,93	0/0:21,0:21:41.90:0,42,840	0/1:41,1:33:99:198,0,136	0/1:23,0:22:45.84:71,0,46	0/0:49,0:36:50.34:0,50,1032	0/0:39,0:36:38.11:0,38,1452	0/0:34,0:31:55.39:0,55,1065	0/0:47,0:39:86.49:0,86,1626	0/0:20,0:19:48.16:0,48,1014	0/1:21,0:22:33.81:71,0,34	0/1:17,1:15:66.49:66,0,90	0/0:14,0:7:11.42:0,11,75	0/1:6,0:5:29.67:33,0,30	1/1:47,0:27:1.66:4,2,0	1/1:39,9:38:42.06:585,42,0	0/1:27,2:27:8.47:278,0,8	0/0:51,0:45:71.19:0,71,1282	0/0:27,0:22:35.81:0,36,756	0/1:21,0:7:26.69:27,0,51	0/0:5,0:4:0:0,0,0	0/0:9,0:6:9.03:0,9,168
chr10	87366807	.	A	AAC	2229.21	PASS	AB=0.861;AC=18;AF=0.321;AN=56;BaseQRankSum=5.163;DP=775;FS=27.391;HRun=0;HaplotypeScore=149.2257;InbreedingCoeff=0.2316;MQ=46.08;MQ0=37;MQRankSum=-7.156;QD=7.77;ReadPosRankSum=-2.352;VQSLOD=1.5356;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:27.01:0,27,302	0/1:14,2:11:11.16:81,0,11	0/0:65,0:9:16.95:0,17,117	0/0:77,0:8:4.30:0,4,27	0/0:23,0:23:50.70:0,51,626	0/1:24,6:24:99:198,0,114	0/1:33,6:25:99:135,0,253	0/1:15,0:9:25.99:47,0,26	0/0:31,0:31:61.36:0,61,731	0/1:30,9:32:99:441,0,235	1/1:9,6:13:13.72:303,14,0	0/0:55,0:52:99:0,130,1446	0/0:34,0:33:73.84:0,74,793	0/0:31,0:30:46.58:0,47,626	0/0:40,0:37:48.12:0,48,831	0/0:37,0:35:78.49:0,78,945	0/1:20,7:21:10.82:296,0,11	1/1:9,11:17:29.79:461,30,0	0/0:7,0:3:3.01:0,3,38	0/0:5,0:4:3.07:0,3,11	1/1:13,1:9:6.39:46,6,0	0/1:32,7:25:36.52:249,0,37	0/1:17,4:16:20.40:92,0,20	0/0:45,0:42:41:0,41,961	0/0:16,0:16:9.26:0,9,255	1/1:5,0:5:6.61:26,7,0	0/0:6,0:4:2.43:0,2,9	1/1:6,0:5:9.99:32,10,0
chr10	87366833	.	AAC	A	1665.92	PASS	AB=0.895;AC=22;AF=0.407;AN=54;BaseQRankSum=8.381;DP=841;FS=5.574;HRun=0;HaplotypeScore=156.7177;InbreedingCoeff=0.2861;MQ=43.52;MQ0=43;MQRankSum=-2.757;QD=3.27;ReadPosRankSum=-1.111;VQSLOD=2.3930;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:18:27.29:0,27,232	1/1:11,4:10:12:125,12,0	0/0:46,0:9:15.39:0,15,174	0/0:59,0:6:10.58:0,11,113	0/0:26,1:28:27.07:0,27,797	0/1:22,0:27:15.45:92,0,15	1/1:36,0:31:16.43:80,16,0	0/0:19,0:11:2.03:0,2,25	0/1:32,5:37:98.12:98,0,786	0/1:33,8:31:14.03:276,0,14	1/1:12,9:18:28.53:285,29,0	0/1:54,4:56:44.93:45,0,1445	0/1:37,2:39:44.59:45,0,867	0/0:40,1:40:3.37:0,3,812	0/1:42,1:37:3.17:3,0,827	0/0:34,1:34:31.52:0,32,899	1/1:19,6:19:18.05:207,18,0	1/1:20,7:22:23.19:246,23,0	0/0:16,0:6:5.48:0,5,29	0/0:9,0:8:4.56:0,5,41	./.	1/1:32,0:27:16.49:82,16,0	1/1:14,0:19:19.39:93,19,0	0/1:42,5:44:99:157,0,642	0/0:27,0:27:54.41:0,54,748	0/1:16,1:14:14.22:14,0,75	0/0:11,0:8:2.03:0,2,6	0/0:6,0:5:7.41:0,7,30
chr10	87366939	.	T	TACCTTGCTGAGGTCATGTTAA	41645.83	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=2.509;DP=651;FS=131.925;HRun=0;HaplotypeScore=315.1103;InbreedingCoeff=0.9916;MQ=93.56;MQ0=0;MQRankSum=-17.609;QD=169.29;ReadPosRankSum=-3.405;VQSLOD=1.3574;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,3:16:25.28:1490,25,0	1/1:2,3:4:12.04:703,12,0	0/0:35,0:35:98.50:0,98,4203	0/0:32,0:32:92.98:0,93,3466	0/0:27,0:27:81.28:0,81,4532	1/1:5,3:11:24.08:1732,24,0	1/1:11,2:16:36.12:2743,36,0	1/1:29,0:29:81.26:4927,81,0	0/0:49,0:49:99:0,144,7685	1/1:8,9:20:60.20:4080,60,0	1/1:2,4:7:18.06:1299,18,0	0/0:53,0:53:99:0,157,8387	0/0:32,0:32:96.30:0,96,4983	0/0:31,0:31:93.28:0,93,4834	0/0:58,0:58:99:0,166,8614	0/0:33,0:32:96.32:0,96,5301	1/1:7,1:8:24.04:1237,24,0	1/1:7,4:10:30.10:1984,30,0	1/1:6,0:6:18.02:575,18,0	1/1:5,6:12:36.12:2738,36,0	1/1:10,2:17:36.12:2441,36,0	1/1:10,9:18:42.14:3579,42,0	1/1:6,6:14:26.96:2172,27,0	0/0:29,0:29:84.25:0,84,4595	0/0:26,0:26:78.26:0,78,4296	1/1:21,0:21:57.15:3589,57,0	1/1:7,8:17:51.17:4476,51,0	1/1:2,5:8:20.80:1881,21,0
chr10	87367307	.	G	GC	6553.55	PASS	AB=0.909;AC=33;AF=0.611;AN=54;BaseQRankSum=-3.497;DP=295;FS=13.370;HRun=0;HaplotypeScore=39.4838;InbreedingCoeff=0.8726;MQ=58.78;MQ0=4;MQRankSum=-5.585;QD=37.66;ReadPosRankSum=0.244;VQSLOD=3.0835;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:14:30.10:479,30,0	1/1:0,3:3:9.03:138,9,0	0/0:30,0:15:9.75:0,10,323	0/0:26,0:12:23.74:0,24,372	0/0:9,0:9:24.08:0,24,334	1/1:2,13:15:36.12:575,36,0	1/1:1,12:12:36.12:572,36,0	1/1:1,14:15:42.13:639,42,0	0/0:5,0:5:15.05:0,15,210	1/1:0,7:6:18.06:278,18,0	1/1:0,5:5:12.04:190,12,0	0/0:10,0:10:30.09:0,30,404	0/0:9,0:8:24.08:0,24,335	0/0:8,0:8:24.07:0,24,319	0/0:5,0:5:15.05:0,15,210	0/0:11,0:11:27.09:0,27,378	1/1:0,2:2:6.02:88,6,0	./.	1/1:0,8:8:24.08:381,24,0	1/1:0,8:8:24.08:371,24,0	1/1:0,11:11:33.11:526,33,0	1/1:1,15:16:39.13:611,39,0	1/1:0,5:5:12.04:192,12,0	0/1:18,2:20:41.71:42,0,600	0/0:7,0:7:21.07:0,21,294	1/1:0,8:8:24.08:380,24,0	1/1:0,13:13:39.13:621,39,0	1/1:1,10:11:30.10:472,30,0
chr10	87367350	.	CCG	C	106.43	PASS	AB=0.750;AC=9;AF=0.188;AN=48;BaseQRankSum=2.786;DP=206;FS=4.059;HRun=0;HaplotypeScore=39.1702;InbreedingCoeff=0.4978;MQ=45.79;MQ0=7;MQRankSum=-0.157;QD=4.26;ReadPosRankSum=2.083;VQSLOD=1.5387;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:14.80:0,15,103	0/0:2,0:2:2.97:0,3,20	0/0:10,0:4:10.03:0,10,86	0/0:15,0:8:0.47:0,0,71	0/0:8,0:8:5.99:0,6,48	0/0:11,0:11:8.64:0,9,60	0/0:17,0:16:10.47:0,10,60	1/1:4,0:3:5.30:25,5,0	0/0:6,0:6:6.16:0,6,42	0/0:5,0:4:7.20:0,7,45	./.	0/0:9,0:9:14.96:0,15,124	0/0:10,0:9:11.98:0,12,100	0/0:12,0:12:16.19:0,16,121	0/0:3,0:3:5.96:0,6,44	0/0:9,0:8:17.96:0,18,189	./.	0/0:5,0:5:11.89:0,12,82	./.	./.	1/1:4,3:7:11.79:88,12,0	0/0:12,0:12:10.45:0,10,109	0/0:3,0:3:0:0,0,0	0/0:12,0:12:5.66:0,6,78	0/0:9,0:9:18.41:0,18,143	1/1:4,1:5:8.90:60,9,0	1/1:2,1:3:3:25,3,0	0/1:4,2:6:16.29:40,0,16
chr10	87367365	.	GAGA	G	1272.93	PASS	AB=0.964;AC=24;AF=0.429;AN=56;BaseQRankSum=0.331;DP=221;FS=0.000;HRun=0;HaplotypeScore=55.2342;InbreedingCoeff=0.6900;MQ=68.87;MQ0=2;MQRankSum=-4.334;QD=17.44;ReadPosRankSum=-3.429;VQSLOD=2.2199;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:2.43:2,0,3	1/1:1,0:1:3.01:47,3,0	0/0:17,0:13:36.10:0,36,634	0/0:15,0:9:16.90:0,17,306	0/0:10,0:11:24.08:0,24,438	1/1:5,2:7:21.07:301,21,0	1/1:10,4:15:23.49:346,23,0	0/0:5,0:5:1.46:0,1,36	0/0:12,0:12:30.10:0,30,566	1/1:2,4:6:15.05:223,15,0	1/1:2,0:3:4.26:41,4,0	0/0:13,0:13:27.09:0,27,468	0/0:9,0:9:27.09:0,27,522	0/0:14,0:15:31.33:0,31,587	0/0:7,0:7:18.06:0,18,316	0/0:7,0:6:12.04:0,12,224	1/1:2,0:2:5.60:39,6,0	1/1:2,0:2:6.01:69,6,0	1/1:5,0:5:3.02:23,3,0	0/0:4,1:5:2.04:0,2,6	1/1:6,0:6:2.91:6,3,0	1/1:3,0:3:9.03:141,9,0	1/1:6,0:6:15.05:219,15,0	0/0:10,0:10:25.90:0,26,427	0/0:12,0:13:26.93:0,27,500	0/0:4,0:4:6.85:0,7,37	0/0:5,0:5:5.27:0,5,60	0/1:4,0:4:2.20:2,0,27
chr10	87368775	.	TAATA	T	3073.27	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=10.428;DP=405;FS=1.743;HRun=0;HaplotypeScore=59.0210;InbreedingCoeff=0.8898;MQ=51.82;MQ0=6;MQRankSum=-2.418;QD=23.46;ReadPosRankSum=1.068;VQSLOD=2.9156;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:72.20:0,72,1717	1/1:6,3:9:9.03:153,9,0	0/0:11,0:5:12.04:0,12,276	0/1:10,0:3:2.95:3,0,129	0/0:25,0:25:51.16:0,51,1217	1/1:3,13:15:33.11:560,33,0	1/1:1,6:7:18.06:305,18,0	0/0:30,0:29:54.17:0,54,1237	0/0:12,0:12:27.09:0,27,674	1/1:10,13:22:39.13:637,39,0	1/1:9,10:18:21.07:357,21,0	0/0:10,0:10:21.07:0,21,522	0/0:16,0:15:36.12:0,36,889	0/0:3,0:3:6.02:0,6,150	0/0:13,0:13:30.09:0,30,675	0/0:7,0:7:18.06:0,18,423	1/1:3,12:14:33.11:560,33,0	1/1:2,5:7:9.03:153,9,0	0/0:25,0:24:54.19:0,54,1348	0/0:12,0:12:24.08:0,24,599	0/0:9,0:9:18.06:0,18,423	1/1:6,7:13:18.06:305,18,0	1/1:5,7:12:15.05:248,15,0	0/0:4,0:4:9.03:0,9,155	0/0:21,0:21:60.21:0,60,1489	0/0:17,0:17:36.12:0,36,891	0/0:10,0:9:24.08:0,24,599	0/0:16,0:14:30.10:0,30,687
chr10	87370873	.	G	GC	1123	PASS	AB=0.955;AC=18;AF=0.333;AN=54;BaseQRankSum=-3.412;DP=229;FS=7.488;HRun=6;HaplotypeScore=31.6987;InbreedingCoeff=0.7169;MQ=76.81;MQ0=0;MQRankSum=-0.472;QD=13.86;ReadPosRankSum=1.400;VQSLOD=1.5149;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:38.93:0,39,364	1/1:1,2:3:6:61,6,0	0/0:5,0:5:7.54:0,8,64	0/1:5,0:5:1.17:1,0,24	0/0:2,0:2:6.01:0,6,61	1/1:2,5:7:9.03:110,9,0	1/1:2,16:18:27.56:341,28,0	0/0:8,0:8:12.02:0,12,122	0/0:4,0:4:6.01:0,6,61	1/1:1,6:7:9.03:106,9,0	./.	0/0:15,0:15:39.08:0,39,391	0/0:7,0:7:17.73:0,18,141	0/0:13,0:13:7.06:0,7,101	0/0:12,0:12:35.62:0,36,312	0/0:3,0:3:9.01:0,9,85	1/1:1,9:10:15.05:189,15,0	1/1:1,7:8:15.05:189,15,0	0/0:8,0:8:15.01:0,15,145	0/0:3,0:3:6.01:0,6,61	0/0:27,0:27:54.11:0,54,549	1/1:2,7:9:15.05:189,15,0	1/1:0,4:4:9.03:112,9,0	0/0:8,0:8:15.03:0,15,153	0/0:6,0:6:15.03:0,15,153	0/1:9,1:10:13.67:14,0,190	0/0:4,0:4:12.03:0,12,121	0/0:7,0:7:21.05:0,21,214
chr10	87373853	.	GT	G	4294.77	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-1.195;DP=580;FS=13.884;HRun=10;HaplotypeScore=70.5211;InbreedingCoeff=0.8929;MQ=69.03;MQ0=0;MQRankSum=-0.826;QD=18.84;ReadPosRankSum=3.362;VQSLOD=4.6827;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:86.96:755,87,0	1/1:0,7:7:17.99:156,18,0	0/0:13,0:11:5.25:0,5,89	0/0:7,0:6:5.83:0,6,38	0/0:31,0:32:76.05:0,76,852	1/1:2,19:21:53.98:469,54,0	1/1:2,14:16:32.99:286,33,0	0/0:30,1:31:14.50:0,15,350	0/0:21,0:21:57.01:0,57,603	1/1:1,27:28:80.94:694,81,0	1/1:2,12:15:32.01:266,32,0	0/0:25,0:25:62.16:0,62,650	0/0:16,1:17:16:0,16,370	0/0:18,0:18:51.10:0,51,545	0/0:24,1:25:43.10:0,43,685	0/0:19,1:21:16.51:0,17,500	1/1:3,26:30:68.02:579,68,0	1/1:3,28:31:68.94:592,69,0	0/1:22,0:22:3.23:3,0,164	0/0:28,0:28:41.14:0,41,361	0/0:19,0:19:44.71:0,45,293	1/1:2,6:8:14.98:130,15,0	1/1:0,17:17:41.99:364,42,0	0/0:14,1:15:7.05:0,7,298	0/0:13,0:13:26.25:0,26,356	0/0:29,0:29:27.18:0,27,316	0/0:25,1:26:49.89:0,50,393	0/0:11,0:11:26.94:0,27,163
chr10	87373974	.	G	GTT	4076.56	PASS	AB=0.589;AC=29;AF=0.518;AN=56;BaseQRankSum=6.901;DP=633;FS=5.256;HRun=11;HaplotypeScore=94.7983;InbreedingCoeff=0.5722;MQ=72.52;MQ0=0;MQRankSum=-1.701;QD=10.12;ReadPosRankSum=1.050;VQSLOD=1.9539;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:20:23.87:112,24,0	1/1:3,1:15:4.36:109,4,0	0/0:13,0:12:4.21:0,4,148	0/0:12,0:13:12.23:0,12,112	0/0:35,0:35:71.89:0,72,669	1/1:3,22:27:51.17:724,51,0	1/1:3,12:17:35.09:452,35,0	0/1:12,1:34:10.18:149,0,10	0/0:24,0:24:46.71:0,47,463	0/1:7,0:24:6.05:66,0,6	1/1:6,0:29:0.57:133,1,0	0/0:24,0:25:39.89:0,40,568	0/0:19,0:19:36.95:0,37,419	0/0:19,0:21:44.73:0,45,419	0/0:26,0:25:63.02:0,63,611	0/0:22,0:22:47.99:0,48,465	1/1:9,0:27:16.33:117,16,0	0/1:7,1:22:36.35:95,0,36	1/1:3,0:17:9.34:106,9,0	1/1:7,1:32:12.50:241,13,0	1/1:7,0:21:1.35:65,1,0	1/1:4,14:18:13.13:512,13,0	1/1:4,22:28:60.93:837,61,0	0/0:8,0:8:18.02:0,18,174	0/0:22,0:22:54:0,54,509	0/1:12,0:28:37.68:104,0,38	1/1:5,1:33:31.82:203,32,0	0/1:1,0:11:0.62:52,0,1
chr10	87374556	.	GTT	G	899.29	PASS	AB=0.787;AC=20;AF=0.357;AN=56;BaseQRankSum=7.067;DP=321;FS=0.000;HRun=16;HaplotypeScore=56.2251;InbreedingCoeff=0.5295;MQ=74.19;MQ0=2;MQRankSum=-1.809;QD=7.31;ReadPosRankSum=5.085;VQSLOD=-0.4465;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:0.61:1,0,110	0/0:0,0:5:11.98:0,12,104	0/0:27,0:13:10.27:0,10,110	0/0:15,0:9:8.75:0,9,66	0/0:20,0:20:40.94:0,41,449	0/1:1,1:6:14.34:14,0,45	0/1:4,1:5:11.33:11,0,82	1/1:3,6:9:17.77:141,18,0	0/1:9,1:10:4.07:4,0,186	0/0:5,0:13:22.27:0,22,182	0/0:3,0:13:35.97:0,36,359	0/0:9,0:9:9.03:0,9,118	0/0:11,0:11:26.39:0,26,279	0/1:8,0:10:4.76:5,0,171	0/0:4,0:7:17.36:0,17,138	0/0:11,1:14:8.36:0,8,315	0/0:4,0:13:24.04:0,24,249	0/0:13,0:22:32.43:0,32,343	1/1:5,2:7:6.40:50,6,0	1/1:4,14:20:43.50:343,43,0	1/1:3,3:6:8.92:75,9,0	0/0:4,0:7:7.73:0,8,39	0/1:1,1:10:4.97:5,0,70	0/0:10,0:12:28.19:0,28,266	0/0:7,0:9:22.19:0,22,206	1/1:1,5:7:17.70:137,18,0	1/1:3,10:14:28.99:248,29,0	1/1:0,5:5:5.99:50,6,0
chr10	87375530	.	A	AACAC	6351.72	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-4.291;DP=584;FS=5.816;HRun=0;HaplotypeScore=87.0972;InbreedingCoeff=0.9873;MQ=67.16;MQ0=5;MQRankSum=-0.914;QD=31.44;ReadPosRankSum=2.378;VQSLOD=4.5912;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:38:67.10:305,67,0	1/1:0,8:6:12.04:292,12,0	0/0:35,0:18:18.46:0,18,579	0/0:20,0:13:20.76:0,21,264	0/0:23,0:23:66.23:0,66,1154	1/1:5,16:21:36.12:890,36,0	1/1:1,18:18:21.07:536,21,0	0/0:28,0:27:63.19:0,63,1020	0/0:18,0:18:45.14:0,45,761	1/1:6,20:26:57.13:1177,57,0	1/1:1,15:12:24.08:604,24,0	0/0:14,0:14:36.12:0,36,621	0/0:15,0:15:42.14:0,42,710	0/0:14,0:14:39.13:0,39,683	0/0:23,0:23:54.12:0,54,883	0/0:16,0:16:42.14:0,42,709	1/1:5,19:23:39.13:931,39,0	1/1:1,14:15:30.10:766,30,0	0/0:22,0:22:54.16:0,54,876	0/0:22,0:22:57.16:0,57,934	0/0:20,0:20:60.19:0,60,1019	1/1:3,11:12:11.74:306,12,0	1/1:2,14:15:23.09:544,23,0	0/0:17,0:17:42.14:0,42,736	0/0:34,0:34:99:0,99,1726	0/0:22,0:22:63.20:0,63,1077	0/0:20,0:20:54.17:0,54,919	0/0:19,0:19:54.17:0,54,918
chr10	87375788	.	ATGTTT	A	329.17	PASS	AB=1.000;AC=11;AF=0.239;AN=46;BaseQRankSum=4.114;DP=556;FS=19.373;HRun=0;HaplotypeScore=88.0492;InbreedingCoeff=0.6978;MQ=59.43;MQ0=18;MQRankSum=-0.573;QD=2.79;ReadPosRankSum=-1.028;VQSLOD=0.2533;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,13:12:9.03:170,9,0	./.	0/1:34,0:25:12.72:13,0,609	0/0:34,1:25:37.33:0,37,762	0/0:22,0:22:57.20:0,57,1628	./.	./.	0/0:27,0:24:36.12:0,36,1003	0/0:18,0:18:48.16:0,48,1372	1/1:8,13:10:6.02:113,6,0	1/1:9,12:10:3.01:57,3,0	0/0:30,0:29:66.23:0,66,1871	0/0:13,0:13:18.06:0,18,514	0/0:13,0:13:33.10:0,33,884	0/0:20,0:20:39.13:0,39,1122	0/0:27,0:27:42.11:0,42,1149	./.	./.	0/0:20,0:20:24.05:0,24,457	0/0:18,0:18:39.08:0,39,999	0/0:28,0:27:54.19:0,54,1526	1/1:4,5:6:3.01:57,3,0	1/1:3,10:8:3.01:57,3,0	0/0:23,0:23:57.20:0,57,1648	0/0:25,0:25:66.23:0,66,1902	0/0:25,2:24:48.16:0,48,1377	0/0:24,0:24:54.19:0,54,1545	0/0:6,0:6:15.05:0,15,434
chr10	87376285	.	G	GATTA	3709.51	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=7.989;DP=570;FS=11.946;HRun=0;HaplotypeScore=107.2212;InbreedingCoeff=0.5580;MQ=59.25;MQ0=1;MQRankSum=-0.102;QD=19.73;ReadPosRankSum=-1.564;VQSLOD=1.9309;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:15.33:343,15,0	0/1:11,0:11:0.12:0,0,172	0/0:24,0:19:56.94:0,57,548	0/0:22,0:15:41.30:0,41,499	0/0:26,0:26:74.94:0,75,1079	1/1:1,13:15:24.08:656,24,0	1/1:3,13:17:20.99:464,21,0	0/0:28,0:28:75.01:0,75,819	0/0:23,0:23:63.11:0,63,1035	0/1:32,0:32:99:317,0,239	0/1:19,0:19:99:172,0,126	0/0:29,0:29:87.07:0,87,1244	0/0:13,0:13:36.11:0,36,714	0/0:16,0:16:48.11:0,48,851	0/0:21,0:21:57.13:0,57,970	0/0:16,0:16:48.07:0,48,725	0/1:22,0:23:99:106,0,266	0/1:18,0:18:99:145,0,151	0/0:18,0:16:48.01:0,48,730	0/0:9,0:9:27.02:0,27,446	0/0:19,0:19:57.07:0,57,918	1/1:1,19:22:56.77:1288,57,0	1/1:0,18:18:14.79:219,15,0	0/0:21,0:21:63.06:0,63,972	0/0:19,0:19:54.07:0,54,903	0/0:31,1:32:6.12:0,6,1450	0/0:28,0:28:81.17:0,81,1519	0/0:18,0:17:51.05:0,51,826
chr10	87376781	.	TTCTCTCTCTCTC	T	2163.41	PASS	AB=0.700;AC=17;AF=0.370;AN=46;BaseQRankSum=4.791;DP=310;FS=15.956;HRun=0;HaplotypeScore=98.0188;InbreedingCoeff=0.5784;MQ=67.25;MQ0=18;MQRankSum=-5.680;QD=24.87;ReadPosRankSum=-1.232;VQSLOD=1.0556;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:13:3.01:0,3,67	./.	0/0:39,0:25:66.18:0,66,3195	0/0:38,0:20:51.60:0,52,2352	0/0:17,0:17:18.06:0,18,759	1/1:6,1:7:3.90:50,4,0	1/1:4,9:13:3.01:101,3,0	1/1:3,6:8:18.06:586,18,0	0/0:11,0:11:30.10:0,30,1298	0/1:7,4:11:30.46:576,0,30	./.	0/0:8,0:8:21.02:0,21,886	0/0:9,0:9:21.07:0,21,845	0/0:14,0:14:24.54:0,25,890	0/0:13,0:13:24.05:0,24,852	0/0:11,0:11:24.08:0,24,953	0/1:6,3:9:53.69:95,0,54	1/1:4,0:4:2.99:24,3,0	1/1:4,8:12:24.02:676,24,0	1/1:6,1:6:6.01:85,6,0	0/1:3,5:6:0:0,0,0	./.	./.	0/0:13,0:13:21.07:0,21,999	0/0:7,0:7:18.06:0,18,423	1/1:4,3:5:6.01:128,6,0	./.	0/0:3,1:4:3.01:0,3,150
chr10	87376817	.	G	GCA	133.44	PASS	AB=0.975;AC=20;AF=0.385;AN=52;BaseQRankSum=6.425;DP=262;FS=4.841;HRun=0;HaplotypeScore=58.6094;InbreedingCoeff=-0.0886;MQ=28.08;MQ0=20;MQRankSum=-1.140;QD=0.89;ReadPosRankSum=-5.422;VQSLOD=-0.2677;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:4.03:4,0,29	./.	0/0:10,0:1:2.94:0,3,18	0/0:14,0:1:3.01:0,3,43	0/0:14,0:14:1.69:0,2,19	0/1:12,0:10:0.56:1,0,28	0/0:7,0:7:2.64:0,3,32	0/1:13,0:13:91.92:92,0,147	0/1:8,0:8:4.32:4,0,73	0/1:12,1:12:17.23:17,0,210	0/0:4,0:3:2.14:0,2,29	0/1:9,0:9:0.10:0,0,2	0/0:6,0:6:3.90:0,4,48	0/0:12,0:12:1.53:0,2,75	0/1:14,0:13:8.18:8,0,37	1/1:7,0:7:0.93:3,1,0	0/0:8,1:8:5.36:0,5,51	0/0:1,0:1:3.01:0,3,39	0/0:16,0:14:19.54:0,20,324	1/1:7,0:7:1.36:3,1,0	./.	1/1:6,0:5:0.94:3,1,0	1/1:5,1:6:0.94:3,1,0	0/0:13,0:12:5.25:0,5,82	1/1:3,1:4:2.97:11,3,0	0/1:14,2:12:59.54:60,0,172	0/1:10,0:9:2.29:2,0,30	0/1:9,0:9:38.54:39,0,60
chr10	87377283	.	T	TG	120.61	PASS	AB=0.583;AC=14;AF=0.500;AN=28;BaseQRankSum=-0.312;DP=58;FS=7.782;HRun=1;HaplotypeScore=10.0622;InbreedingCoeff=0.3579;MQ=51.96;MQ0=25;MQRankSum=-0.101;QD=4.31;ReadPosRankSum=2.074;VQSLOD=0.3548;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:0,1:1:0:0,0,0	0/0:0,4:4:0.46:0,0,1	0/0:13,0:1:3:0,3,27	0/1:10,0:1:0:0,0,0	./.	0/1:0,2:2:0:0,0,0	1/1:0,1:1:0.47:1,0,0	./.	./.	./.	./.	0/0:0,5:5:0.42:0,0,1	./.	./.	0/1:0,2:2:0:0,0,0	./.	./.	./.	1/1:2,1:1:3.01:47,3,0	0/1:0,2:2:0.13:0,0,0	./.	0/1:0,2:2:0:0,0,0	0/0:1,0:1:0.89:0,1,2	./.	./.	1/1:1,0:2:6.02:66,6,0	1/1:0,3:3:5.30:80,5,0	./.
chr10	87377334	.	A	ATCGAC	10354.26	PASS	AC=48;AF=0.960;AN=50;BaseQRankSum=0.625;DP=179;FS=0.000;HRun=0;HaplotypeScore=172.1713;InbreedingCoeff=0.3304;MQ=39.11;MQ0=0;MQRankSum=-1.732;QD=58.83;ReadPosRankSum=0.767;VQSLOD=4.8190;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,4:14:21.07:683,21,0	1/1:3,3:6:12.04:395,12,0	./.	0/0:1,0:1:3.01:0,3,50	1/1:2,3:5:9.03:245,9,0	1/1:5,3:8:15.05:490,15,0	1/1:5,2:7:18.06:430,18,0	1/1:12,1:13:39.13:800,39,0	1/1:1,5:6:18.06:520,18,0	1/1:2,4:6:15.05:474,15,0	./.	1/1:5,5:10:15.05:457,15,0	1/1:2,4:6:15.05:416,15,0	1/1:4,5:9:21.07:663,21,0	1/1:1,6:7:21.07:604,21,0	1/1:1,4:5:15.05:493,15,0	1/1:3,6:9:12.04:369,12,0	1/1:4,5:9:18.06:591,18,0	1/1:3,1:3:8.86:211,9,0	1/1:1,1:3:3:78,3,0	1/1:10,2:12:6.02:194,6,0	1/1:2,3:4:6.02:132,6,0	1/1:3,5:8:18.06:465,18,0	1/1:1,1:2:3.01:63,3,0	1/1:3,2:5:6.02:177,6,0	1/1:1,6:7:18.06:590,18,0	1/1:5,5:10:30.07:814,30,0	./.
chr10	87377342	.	AG	A	5765.80	PASS	AB=0.500;AC=49;AF=0.907;AN=54;BaseQRankSum=0.017;DP=191;FS=0.000;HRun=2;HaplotypeScore=151.5927;InbreedingCoeff=0.4512;MQ=38.44;MQ0=0;MQRankSum=-1.585;QD=31.00;ReadPosRankSum=2.255;VQSLOD=4.4066;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:33.11:459,33,0	1/1:0,6:6:15.05:203,15,0	0/0:2,0:2:3.01:0,3,37	0/0:2,0:1:3:0,3,29	0/1:0,5:5:1.26:57,0,1	1/1:0,8:8:24.08:328,24,0	1/1:0,7:7:21.07:279,21,0	1/1:0,12:12:36.12:502,36,0	1/1:0,6:6:18.06:243,18,0	1/1:0,7:7:21.07:284,21,0	./.	1/1:0,10:10:27.07:346,27,0	1/1:0,6:6:18.05:234,18,0	1/1:0,9:9:21.06:269,21,0	1/1:0,7:7:20.73:213,21,0	1/1:0,5:5:15.05:209,15,0	1/1:0,13:13:21.07:272,21,0	1/1:0,10:10:27.09:371,27,0	1/1:0,4:3:9.03:126,9,0	1/1:0,3:3:5.91:57,6,0	1/1:0,12:12:16.77:280,17,0	1/1:0,5:4:5.05:43,5,0	1/1:1,7:8:17.36:189,17,0	1/1:0,3:3:2.56:10,3,0	1/1:0,6:6:12.03:145,12,0	1/1:0,6:6:18.06:247,18,0	1/1:0,10:10:27.08:359,27,0	1/1:0,1:1:3.01:42,3,0
chr10	87377488	.	CTT	C	8241.17	PASS	AB=0.970;AC=35;AF=0.625;AN=56;BaseQRankSum=7.519;DP=565;FS=0.778;HRun=11;HaplotypeScore=122.0181;InbreedingCoeff=0.8896;MQ=76.93;MQ0=7;MQRankSum=-0.898;QD=22.46;ReadPosRankSum=2.209;VQSLOD=4.0769;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:38:93.21:990,93,0	1/1:1,6:7:18.04:192,18,0	0/0:64,0:35:2.72:0,3,440	0/1:62,0:30:3.92:4,0,252	0/0:16,0:18:44.31:0,44,617	1/1:0,18:18:51.13:543,51,0	1/1:1,17:18:42.10:447,42,0	1/1:5,15:20:45.07:479,45,0	0/0:8,0:10:23.05:0,23,277	1/1:1,14:15:42.10:447,42,0	1/1:2,15:17:42.10:447,42,0	0/0:20,0:21:41.58:0,42,559	0/0:11,0:12:32.60:0,33,463	0/0:9,0:11:28.99:0,29,357	0/0:14,0:15:38.62:0,39,559	0/0:18,0:19:47.61:0,48,666	1/1:1,33:34:93.23:990,93,0	1/1:3,28:31:81.20:862,81,0	1/1:2,13:15:39.07:405,39,0	1/1:1,11:12:27.05:287,27,0	1/1:2,8:10:24.06:255,24,0	1/1:2,5:7:15.03:160,15,0	1/1:0,8:8:24.06:255,24,0	0/0:12,0:12:36.11:0,36,533	0/0:13,0:14:35.57:0,36,485	1/1:2,20:22:57.12:607,57,0	1/1:0,28:28:80.94:842,81,0	1/1:1,1:2:3.01:32,3,0
chr10	87377696	.	CT	C	9661.69	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=13.206;DP=471;FS=0.000;HRun=3;HaplotypeScore=58.7009;InbreedingCoeff=0.9858;MQ=65.51;MQ0=3;MQRankSum=-0.576;QD=30.77;ReadPosRankSum=2.296;VQSLOD=4.6180;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,35:37:87.27:1075,87,0	1/1:0,6:6:18.06:222,18,0	0/0:12,0:8:18.68:0,19,274	0/0:9,0:6:9:0,9,97	0/0:26,0:26:72.10:0,72,984	1/1:0,17:17:45.14:557,45,0	1/1:0,9:9:18.06:223,18,0	1/1:1,28:28:81.15:895,81,0	0/0:10,0:10:24.05:0,24,308	1/1:1,22:23:63.13:748,63,0	1/1:0,16:16:45.13:556,45,0	0/0:17,0:17:48.13:0,48,639	0/0:16,0:16:48.14:0,48,655	0/0:9,0:9:27.08:0,27,370	0/0:11,0:11:33.08:0,33,438	0/0:13,0:13:39.08:0,39,488	1/1:1,21:22:54.17:668,54,0	1/1:0,27:27:75.24:927,75,0	1/1:2,16:17:48.12:577,48,0	1/1:1,10:11:27.08:333,27,0	1/1:1,15:16:30.09:371,30,0	1/1:0,7:7:18.06:222,18,0	1/1:2,12:14:24.07:296,24,0	0/0:8,0:8:24.04:0,24,321	0/0:24,0:24:69.23:0,69,979	1/1:2,24:26:72.21:878,72,0	1/1:0,22:22:48.15:594,48,0	1/1:0,14:14:42.13:519,42,0
chr10	87378007	.	GCC	G	1598.72	PASS	AB=0.972;AC=12;AF=0.214;AN=56;BaseQRankSum=0.629;DP=521;FS=7.439;HRun=8;HaplotypeScore=106.3206;InbreedingCoeff=0.5841;MQ=70.79;MQ0=3;MQRankSum=0.421;QD=12.49;ReadPosRankSum=-2.684;VQSLOD=0.3609;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:44.05:0,44,158	0/1:5,0:5:7.77:8,0,83	0/0:36,0:24:25.51:0,26,507	0/0:31,0:22:34.44:0,34,528	0/0:20,0:20:60.17:0,60,933	1/1:2,7:9:15.05:183,15,0	1/1:16,14:30:66.91:715,67,0	0/0:23,0:22:45.22:0,45,267	0/0:19,0:19:54.09:0,54,801	0/1:20,1:21:41.86:42,0,257	0/1:13,1:14:46.33:46,0,163	0/0:18,0:18:25.91:0,26,571	0/0:12,0:12:33.10:0,33,522	0/0:26,0:26:72.17:0,72,1062	0/0:14,0:14:36.11:0,36,581	0/0:17,0:17:39.11:0,39,595	0/1:23,0:23:13.03:13,0,324	0/0:23,0:23:18.48:0,18,382	0/0:14,0:14:26.83:0,27,217	0/0:12,0:12:22.97:0,23,105	0/0:19,0:19:51.62:0,52,393	1/1:1,10:11:30.09:365,30,0	1/1:2,13:15:33.10:400,33,0	0/0:26,0:26:74.96:0,75,1141	0/0:11,0:11:33.10:0,33,533	0/0:17,0:17:41.85:0,42,308	0/0:14,0:14:22.37:0,22,90	0/0:10,0:10:26.86:0,27,113
chr10	87378014	.	CCACA	C	3872.02	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-1.168;DP=536;FS=9.407;HRun=0;HaplotypeScore=121.2519;InbreedingCoeff=0.9967;MQ=66.95;MQ0=5;MQRankSum=-1.146;QD=27.66;ReadPosRankSum=0.692;VQSLOD=3.0298;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:30:56.52:401,57,0	0/0:7,0:7:18.95:0,19,390	0/0:42,0:21:50.65:0,51,630	0/0:35,0:23:43.02:0,43,634	0/0:19,0:19:51.09:0,51,1131	0/0:9,0:9:18.05:0,18,234	0/0:31,0:31:66.94:0,67,783	1/1:7,17:23:45.13:703,45,0	0/0:20,0:20:48.14:0,48,1038	0/0:25,0:25:68.03:0,68,1379	0/0:15,0:15:32.92:0,33,700	0/0:14,0:14:38.87:0,39,885	0/0:13,0:13:33.11:0,33,790	0/0:27,0:27:60.21:0,60,1404	0/0:14,0:14:39.11:0,39,836	0/0:15,0:15:36.09:0,36,739	0/0:22,0:22:51.15:0,51,1178	0/0:23,0:23:60.21:0,60,1366	1/1:5,6:11:23.93:286,24,0	1/1:2,10:12:32.99:466,33,0	1/1:12,7:19:39.06:508,39,0	0/0:11,0:11:33.09:0,33,402	0/0:14,0:14:36.01:0,36,390	0/0:25,0:25:60.17:0,60,1379	0/0:13,0:13:36.11:0,36,814	1/1:4,14:18:42.05:554,42,0	1/1:1,11:12:27.09:445,27,0	1/1:0,13:13:30.10:507,30,0
chr10	87378015	.	CACA	C	2272.14	PASS	AB=0.969;AC=12;AF=0.214;AN=56;BaseQRankSum=1.541;DP=533;FS=12.172;HRun=0;HaplotypeScore=115.9145;InbreedingCoeff=0.5566;MQ=67.96;MQ0=5;MQRankSum=-1.987;QD=16.96;ReadPosRankSum=2.983;VQSLOD=2.7953;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:57.19:1044,57,0	0/0:7,0:7:21.07:0,21,380	0/0:43,0:22:65.21:0,65,872	0/0:38,0:25:33.21:0,33,709	0/0:19,0:19:57.18:0,57,1184	0/0:9,0:9:18.02:0,18,182	0/0:31,0:31:79.61:0,80,747	0/1:22,0:22:56.82:304,0,57	0/0:20,0:20:57.17:0,57,1111	0/0:25,0:25:73.60:0,74,1333	0/0:15,0:15:38.66:0,39,680	0/0:14,0:14:41.35:0,41,832	0/0:13,0:13:39.11:0,39,767	0/0:27,0:27:78.21:0,78,1451	0/0:14,0:14:42.13:0,42,837	0/0:15,0:15:42.11:0,42,814	0/0:22,0:22:56.51:0,57,1091	0/0:23,0:23:65.70:0,66,1290	0/1:10,0:11:68.99:87,0,69	1/1:12,0:12:8.40:241,8,0	0/1:16,0:16:34.01:131,0,34	0/0:11,0:11:32.98:0,33,308	0/0:15,0:15:38.93:0,39,344	0/0:24,0:24:72.21:0,72,1452	0/0:12,0:12:36.12:0,36,788	0/1:17,0:17:52.74:200,0,53	1/1:12,0:12:26.66:201,27,0	1/1:13,0:13:29.90:237,30,0
chr10	87382255	.	CT	C	854.94	PASS	AB=0.701;AC=4;AF=0.071;AN=56;BaseQRankSum=8.908;DP=644;FS=17.199;HRun=2;HaplotypeScore=71.9317;InbreedingCoeff=-0.0773;MQ=70.84;MQ0=0;MQRankSum=-7.178;QD=11.25;ReadPosRankSum=-2.989;VQSLOD=0.0524;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,147,2156	0/0:7,0:7:18.06:0,18,269	0/0:23,0:22:56.81:0,57,850	0/0:18,0:18:46.63:0,47,584	0/0:30,0:30:87.27:0,87,1263	0/0:20,0:20:54.12:0,54,753	0/0:33,0:33:96.30:0,96,1398	0/1:19,14:33:99:545,0,428	0/0:24,0:24:72.24:0,72,1072	0/0:21,0:21:60.20:0,60,900	0/0:15,0:15:42.14:0,42,616	0/0:25,0:25:69.23:0,69,1022	0/0:19,0:19:57.16:0,57,812	0/0:27,0:27:78.23:0,78,1128	0/0:35,0:35:99:0,105,1533	0/0:22,0:22:66.22:0,66,989	0/0:32,0:32:87.15:0,87,1205	0/0:20,0:19:51.14:0,51,723	0/0:20,0:20:60.18:0,60,861	0/0:25,0:25:75.24:0,75,1103	0/1:10,6:16:80.04:80,0,365	0/0:13,0:13:33.10:0,33,474	0/0:17,0:17:51.17:0,51,764	0/0:22,0:22:66.21:0,66,969	0/0:16,0:16:48.16:0,48,719	0/1:13,6:19:99:205,0,409	0/0:28,0:27:81.27:0,81,1212	0/1:3,5:7:99:134,0,114
chr10	87382443	.	TA	T	830.45	PASS	AB=0.747;AC=7;AF=0.125;AN=56;BaseQRankSum=6.230;DP=645;FS=8.542;HRun=11;HaplotypeScore=80.2048;InbreedingCoeff=0.2272;MQ=63.47;MQ0=9;MQRankSum=-2.458;QD=6.75;ReadPosRankSum=0.036;VQSLOD=1.7142;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:20:47.32:0,47,476	0/0:14,0:14:33.08:0,33,346	0/1:27,2:16:12.89:13,0,112	0/0:21,0:11:14.86:0,15,135	0/0:38,1:40:83.57:0,84,1042	0/0:16,0:16:42.11:0,42,448	0/0:17,0:17:30.02:0,30,298	1/1:6,15:19:44.90:363,45,0	0/0:20,0:20:54.12:0,54,567	0/0:29,0:30:74.79:0,75,745	0/0:26,0:26:63.11:0,63,658	0/0:16,0:16:36.05:0,36,366	0/0:20,0:20:45.07:0,45,466	0/0:20,0:19:51.11:0,51,534	0/0:23,0:23:54.12:0,54,566	0/0:25,0:25:69.17:0,69,734	0/0:23,0:23:63.16:0,63,671	0/0:18,0:17:39.07:0,39,406	0/0:17,1:19:11.02:0,11,261	0/0:28,2:30:20.10:0,20,622	0/1:6,9:14:12.42:188,0,12	0/1:20,2:22:1.15:1,0,367	0/0:28,0:28:66.09:0,66,678	0/0:18,0:18:42.58:0,43,448	0/0:41,3:43:48.94:0,49,912	0/1:11,11:21:17.37:231,0,17	0/0:29,1:28:48.35:0,48,691	0/1:5,8:13:60.59:164,0,61
chr10	87382513	.	A	ATGTTTTGTTT	2822.93	PASS	AB=0.677;AC=7;AF=0.125;AN=56;BaseQRankSum=1.066;DP=586;FS=13.477;HRun=0;HaplotypeScore=168.0166;InbreedingCoeff=0.7818;MQ=70.42;MQ0=2;MQRankSum=-8.061;QD=44.11;ReadPosRankSum=-5.176;VQSLOD=1.1004;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:57.20:0,57,1675	0/0:9,0:9:21.06:0,21,554	0/0:37,0:27:21.01:0,21,466	0/0:36,0:31:17.03:0,17,691	0/0:21,0:21:54.12:0,54,1296	0/0:18,0:18:33.07:0,33,913	0/0:21,0:21:48.16:0,48,1421	1/1:24,0:21:35.92:773,36,0	0/0:21,0:21:45.14:0,45,1228	0/0:35,0:35:69.23:0,69,2012	0/0:12,0:12:30.10:0,30,915	0/0:19,0:19:51.15:0,51,1407	0/0:20,0:20:42.11:0,42,1209	0/0:12,0:12:27.08:0,27,701	0/0:14,0:14:33.11:0,33,955	0/0:19,0:19:48.14:0,48,1296	0/0:36,0:36:96.27:0,96,2604	0/0:11,0:11:27.07:0,27,732	0/0:18,0:18:45.15:0,45,1324	0/0:21,0:22:45.12:0,45,1270	1/1:13,1:14:12.04:489,12,0	0/0:22,0:22:51.18:0,51,1537	0/0:19,0:19:36.11:0,36,1032	0/0:18,0:18:54.19:0,54,1646	0/0:29,0:29:42.14:0,42,1212	0/1:11,10:20:52.45:1478,0,52	0/0:26,0:26:69.24:0,69,2103	1/1:5,0:5:6.02:221,6,0
chr10	87382800	.	C	CTTT	3931.47	PASS	AB=0.583;AC=14;AF=0.250;AN=56;BaseQRankSum=2.574;DP=637;FS=8.683;HRun=9;HaplotypeScore=95.0025;InbreedingCoeff=0.8309;MQ=67.04;MQ0=3;MQRankSum=-2.127;QD=21.37;ReadPosRankSum=-2.300;VQSLOD=0.9941;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,1236	1/1:2,7:10:18.06:339,18,0	0/0:20,0:12:24.02:0,24,288	0/0:24,0:17:16.65:0,17,247	0/0:27,0:27:66.12:0,66,816	0/0:23,0:23:63.18:0,63,782	0/0:25,0:25:69.17:0,69,844	1/1:10,0:33:36.64:137,37,0	0/0:15,0:15:36.06:0,36,441	1/1:6,21:28:66.19:1163,66,0	1/1:6,11:19:40.36:680,40,0	0/0:21,0:21:63.17:0,63,768	0/0:16,0:16:45.11:0,45,540	0/0:19,0:19:42.10:0,42,530	0/0:24,0:24:69.20:0,69,857	0/0:18,0:18:45.10:0,45,555	1/1:15,22:38:85.59:1472,86,0	0/0:20,0:20:51.10:0,51,628	0/0:17,0:17:42.12:0,42,527	0/0:34,0:33:84.12:0,84,999	0/1:3,0:13:20.70:28,0,21	0/0:13,0:13:36.10:0,36,440	0/0:22,0:22:29.20:0,29,517	0/0:25,0:25:69.16:0,69,844	0/0:19,0:19:36.01:0,36,442	1/1:5,0:31:34.64:109,35,0	0/0:30,0:32:64.25:0,64,765	0/1:4,0:12:4.12:4,0,29
chr10	87383972	.	C	CCACACA	1074.55	PASS	AB=0.659;AC=17;AF=0.340;AN=50;BaseQRankSum=3.032;DP=500;FS=3.763;HRun=0;HaplotypeScore=111.2510;InbreedingCoeff=0.6945;MQ=58.39;MQ0=17;MQRankSum=-4.988;QD=5.32;ReadPosRankSum=-2.628;VQSLOD=1.6914;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:34:9.43:0,9,123	1/1:9,0:9:5.23:56,5,0	./.	./.	0/0:13,0:15:5.40:0,5,296	0/0:10,0:10:9.50:0,10,154	0/0:26,0:26:23.45:0,23,264	1/1:22,0:18:13.89:110,14,0	0/0:9,0:10:8.98:0,9,111	1/1:18,0:17:15.49:280,15,0	1/1:11,0:11:12.01:206,12,0	0/0:17,0:16:14.73:0,15,159	0/0:16,0:16:18.33:0,18,385	0/0:16,0:15:19.36:0,19,277	0/0:13,0:13:0.71:0,1,162	0/0:14,0:14:7.84:0,8,72	1/1:18,0:32:11.75:205,12,0	0/1:14,0:28:4.21:4,0,108	1/1:11,0:10:1.36:3,1,0	0/0:12,0:12:14.39:0,14,196	1/1:23,16:44:3:40,3,0	0/0:7,0:9:11.17:0,11,92	0/0:10,0:10:5.69:0,6,87	0/0:39,0:39:47.93:0,48,729	0/0:13,0:14:17.86:0,18,260	1/1:23,0:22:21.02:338,21,0	0/0:11,0:10:12.02:0,12,174	./.
chr10	87384419	.	A	AGTGACTGTC	5983.72	PASS	AB=0.605;AC=7;AF=0.125;AN=56;BaseQRankSum=0.915;DP=669;FS=6.363;HRun=0;HaplotypeScore=183.9277;InbreedingCoeff=0.8145;MQ=80.52;MQ0=0;MQRankSum=-10.699;QD=73.87;ReadPosRankSum=-2.617;VQSLOD=4.0249;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.26:0,96,2655	0/0:12,0:12:33.11:0,33,1023	0/0:20,0:20:56.28:0,56,1488	0/0:24,0:24:66.87:0,67,1698	0/0:28,0:28:81.28:0,81,2509	0/0:16,0:15:48.16:0,48,1420	0/0:27,0:27:78.24:0,78,2250	1/1:18,3:22:51.17:1790,51,0	0/0:30,0:30:87.28:0,87,2570	0/0:29,0:29:84.28:0,84,2452	0/0:18,0:18:51.18:0,51,1583	0/0:29,0:29:78.27:0,78,2415	0/0:21,0:21:63.22:0,63,1955	0/0:16,0:16:45.15:0,45,1384	0/0:27,0:27:81.28:0,81,2484	0/0:27,0:27:72.22:0,72,2067	0/0:35,0:35:99:0,99,2929	0/0:27,0:27:72.25:0,72,2181	0/0:24,0:24:72.25:0,72,2142	0/0:22,0:22:63.22:0,63,1955	1/1:11,8:24:9.03:414,9,0	0/0:31,0:31:93.30:0,93,2794	0/0:25,0:25:75.23:0,75,2165	0/0:23,0:23:66.21:0,66,1943	0/0:18,0:18:54.19:0,54,1670	0/1:9,14:26:99:2821,0,204	0/0:26,0:26:72.25:0,72,2156	1/1:5,4:9:21.07:958,21,0
chr10	87385644	.	T	TTTG	1036.18	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=-2.113;DP=376;FS=0.000;HRun=0;HaplotypeScore=66.2281;InbreedingCoeff=0.6798;MQ=41.54;MQ0=36;MQRankSum=2.628;QD=10.16;ReadPosRankSum=-0.342;VQSLOD=2.8674;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:16:15.87:16,0,85	0/0:6,0:4:11.99:0,12,105	0/1:6,0:3:7.89:10,0,8	0/0:7,0:3:7.18:0,7,25	0/0:16,0:16:30.87:0,31,261	0/0:22,0:19:38.37:0,38,296	0/0:18,0:15:25.75:0,26,181	1/1:7,15:27:43.21:501,43,0	0/0:5,0:5:7.09:0,7,94	0/0:11,0:11:18.59:0,19,174	0/0:12,0:10:20.83:0,21,152	0/0:10,0:9:20.88:0,21,176	0/0:10,0:9:14.90:0,15,121	0/0:5,0:5:8.94:0,9,71	0/0:11,0:8:11.82:0,12,90	0/0:12,0:10:26.26:0,26,223	0/0:27,0:22:38.69:0,39,316	0/0:14,0:7:9.39:0,9,65	0/0:18,0:18:42.19:0,42,354	0/0:12,0:11:21.73:0,22,157	1/1:5,8:10:14.89:242,15,0	0/0:8,0:8:15.22:0,15,114	0/0:8,0:5:5.35:0,5,38	0/0:14,0:10:20.81:0,21,200	0/0:12,0:10:26.90:0,27,253	1/1:23,1:21:18.75:196,19,0	0/0:16,0:14:33.44:0,33,353	1/1:2,6:11:18.04:235,18,0
chr10	87385767	.	T	TGG	68.59	PASS	AB=0.818;AC=3;AF=0.060;AN=50;BaseQRankSum=-2.223;DP=355;FS=22.252;HRun=0;HaplotypeScore=45.9104;InbreedingCoeff=0.4249;MQ=38.26;MQ0=78;MQRankSum=-3.120;QD=3.12;ReadPosRankSum=-1.038;VQSLOD=0.2222;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:2:1.25:0,1,3	./.	0/0:15,0:3:5.80:0,6,45	./.	0/0:21,0:18:49.21:0,49,510	0/0:24,0:21:52.41:0,52,669	0/0:16,0:13:37.53:0,38,414	1/1:10,2:6:11.13:109,11,0	0/0:11,0:9:17.75:0,18,197	0/0:7,0:2:2.96:0,3,19	0/0:3,0:1:1.25:0,1,3	0/0:13,0:11:28.88:0,29,325	0/0:7,0:7:18.03:0,18,193	0/0:8,0:7:20.87:0,21,219	0/0:15,0:12:27.06:0,27,317	0/0:9,0:8:21.04:0,21,233	0/0:13,0:6:12.49:0,12,128	0/0:19,0:13:39.10:0,39,461	0/0:28,0:22:60.07:0,60,701	0/0:20,0:17:49.28:0,49,514	./.	0/0:8,0:7:19.56:0,20,194	0/0:12,0:10:23.98:0,24,246	0/0:13,0:9:20.55:0,21,257	0/0:11,0:8:12.01:0,12,127	0/1:7,2:6:56.38:56,0,90	0/0:27,0:22:60.01:0,60,681	0/0:8,1:3:3.01:0,3,36
chr10	87385804	.	A	AC	2247.89	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=11.317;DP=299;FS=3.128;HRun=4;HaplotypeScore=75.3129;InbreedingCoeff=0.8984;MQ=65.62;MQ0=7;MQRankSum=-9.123;QD=25.54;ReadPosRankSum=-4.669;VQSLOD=1.3380;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:12:26.94:266,27,0	1/1:9,0:9:27.08:337,27,0	0/0:4,0:2:2.65:0,3,28	0/0:7,0:8:10.85:0,11,106	0/0:9,0:9:21.06:0,21,238	0/0:17,0:17:48.14:0,48,544	0/0:14,0:14:36.08:0,36,396	1/1:7,4:10:27.07:327,27,0	0/0:11,0:11:33.07:0,33,357	1/1:10,0:10:30.08:355,30,0	1/1:10,0:10:26.95:274,27,0	0/0:15,0:15:42.12:0,42,476	0/0:12,0:12:30.09:0,30,340	0/0:8,0:8:24.06:0,24,264	0/0:10,0:10:24.07:0,24,272	0/0:10,0:10:30.09:0,30,340	0/1:8,0:7:1.81:146,0,2	0/0:13,0:11:30.09:0,30,340	0/0:15,0:15:45.13:0,45,510	0/0:10,0:10:27.08:0,27,306	1/1:8,0:7:14.82:117,15,0	0/0:11,0:11:30.09:0,30,340	0/0:14,0:13:30.09:0,30,340	0/0:10,0:10:30.06:0,30,324	0/0:4,0:4:9.02:0,9,101	1/1:8,4:12:36.06:434,36,0	0/0:16,0:15:42.10:0,42,467	1/1:6,0:6:15.05:197,15,0
chr10	87386834	.	G	GA	1727.24	PASS	AB=0.950;AC=10;AF=0.179;AN=56;BaseQRankSum=-6.217;DP=552;FS=6.314;HRun=10;HaplotypeScore=53.2240;InbreedingCoeff=0.7351;MQ=61.32;MQ0=3;MQRankSum=0.321;QD=16.77;ReadPosRankSum=1.008;VQSLOD=4.1045;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,114,936	1/1:2,5:7:5.95:91,6,0	0/0:5,0:3:5.97:0,6,47	0/1:7,0:4:3.43:3,0,19	0/0:26,0:26:62.91:0,63,514	0/0:20,0:20:53.93:0,54,443	0/0:15,0:15:38.95:0,39,320	0/0:28,0:29:42.39:0,42,516	0/0:13,0:13:28.39:0,28,246	1/1:3,17:20:51.13:543,51,0	1/1:5,13:18:19.46:382,19,0	0/0:19,1:20:47.89:0,48,389	0/0:16,0:16:47.91:0,48,388	0/0:10,0:11:28.98:0,29,224	0/0:31,0:31:82.93:0,83,671	0/0:30,0:30:62.83:0,63,510	1/1:4,29:32:59.57:837,60,0	0/0:23,1:24:18.90:0,19,356	0/1:15,2:18:29.30:29,0,192	0/0:16,0:16:37.96:0,38,298	0/0:21,0:21:58.97:0,59,473	0/0:15,0:15:35.94:0,36,296	0/0:16,0:15:38.94:0,39,319	0/0:26,0:26:68.90:0,69,566	0/0:17,0:17:38.88:0,39,314	0/0:29,1:30:45.80:0,46,571	0/0:18,0:17:47.94:0,48,394	0/0:7,0:6:17.98:0,18,148
chr10	87387501	.	T	TA	3461.78	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.078;DP=510;FS=3.480;HRun=1;HaplotypeScore=60.7129;InbreedingCoeff=0.9945;MQ=71.96;MQ0=0;MQRankSum=-1.822;QD=24.73;ReadPosRankSum=0.211;VQSLOD=3.5373;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1491	1/1:1,10:11:24.04:258,24,0	0/0:13,0:11:17.65:0,18,217	0/0:14,0:14:35.73:0,36,368	0/0:20,0:20:60.19:0,60,820	0/0:12,0:12:36.12:0,36,504	0/0:22,0:22:63.19:0,63,850	1/1:10,30:40:77.74:934,78,0	0/0:26,0:26:78.26:0,78,1090	1/1:0,17:17:50.77:500,51,0	1/1:2,11:13:27.91:283,28,0	0/0:20,0:20:60.19:0,60,821	0/0:18,0:18:48.16:0,48,671	0/0:13,0:13:33.09:0,33,430	0/0:16,0:16:48.15:0,48,654	0/0:18,0:18:54.17:0,54,737	1/1:2,16:18:39.42:442,39,0	0/0:7,0:7:18.06:0,18,250	0/0:32,0:32:84.88:0,85,1195	0/0:18,0:18:54.17:0,54,738	1/1:1,9:10:18.04:192,18,0	0/0:13,0:13:39.13:0,39,540	0/0:16,0:16:48.16:0,48,666	0/0:22,0:22:63.21:0,63,867	0/0:18,0:18:54.18:0,54,748	1/1:2,21:23:60.55:649,61,0	0/0:16,0:16:48.16:0,48,667	1/1:1,6:8:20.84:203,21,0
chr10	87387693	.	T	TAA	5453.66	PASS	AB=0.929;AC=18;AF=0.321;AN=56;BaseQRankSum=-10.993;DP=516;FS=10.574;HRun=9;HaplotypeScore=68.1229;InbreedingCoeff=0.8176;MQ=79.66;MQ0=7;MQRankSum=-0.945;QD=28.40;ReadPosRankSum=-2.526;VQSLOD=3.3323;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.21:0,84,893	1/1:1,2:3:6.02:92,6,0	0/0:39,0:24:26.40:0,26,221	0/1:32,0:19:35.07:35,0,122	0/0:28,0:28:69.13:0,69,734	0/0:11,0:11:30.06:0,30,312	0/0:15,0:15:36.08:0,36,383	1/1:11,31:44:96.32:1345,96,0	0/0:13,0:13:33.08:0,33,351	1/1:4,15:19:45.13:668,45,0	1/1:1,16:19:54.04:717,54,0	0/0:14,0:14:42.08:0,42,431	0/0:14,0:14:42.11:0,42,447	0/0:10,0:10:30.06:0,30,312	0/0:21,0:22:65.87:0,66,671	0/0:11,0:11:33.08:0,33,351	1/1:2,23:26:57.19:878,57,0	0/1:5,1:6:34.66:35,0,83	0/0:24,0:24:60.14:0,60,631	0/0:21,0:21:63.14:0,63,662	1/1:2,10:12:27.09:416,27,0	0/0:9,0:9:27.07:0,27,287	0/0:13,0:13:24.04:0,24,254	0/0:11,0:11:27.06:0,27,287	0/0:20,0:20:54.12:0,54,574	1/1:5,16:21:57.17:807,57,0	0/0:18,0:19:41.80:0,42,418	1/1:0,10:10:30.10:462,30,0
chr10	87388832	.	TTTTA	T	775.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.870;DP=365;FS=7.038;HRun=0;HaplotypeScore=58.6555;InbreedingCoeff=0.7015;MQ=62.06;MQ0=5;MQRankSum=0.005;QD=29.81;ReadPosRankSum=2.191;VQSLOD=2.7236;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:22:48.06:870,48,0	0/0:5,0:5:15.05:0,15,404	0/0:6,0:2:6.02:0,6,107	0/0:10,0:6:7.73:0,8,134	0/0:15,0:15:45.14:0,45,1158	0/0:17,0:17:51.18:0,51,1350	0/0:12,0:12:36.11:0,36,833	0/0:33,0:33:93.22:0,93,2095	0/0:15,0:15:36.12:0,36,938	0/0:15,0:15:39.13:0,39,1000	0/0:11,0:11:33.11:0,33,889	0/0:10,0:10:27.09:0,27,694	0/0:15,0:15:39.13:0,39,1041	0/0:13,0:13:39.13:0,39,1053	0/0:9,0:9:27.09:0,27,726	0/0:13,0:13:39.13:0,39,1050	0/0:16,0:16:45.12:0,45,1099	0/0:12,0:12:33.11:0,33,874	0/0:14,0:12:33.09:0,33,739	0/0:13,0:13:39.13:0,39,1038	0/0:3,0:3:6.02:0,6,153	0/0:3,0:3:5.90:0,6,162	0/0:10,0:10:30.10:0,30,810	0/0:8,0:8:24.08:0,24,648	0/0:20,0:20:57.20:0,57,1501	0/0:10,0:10:30.09:0,30,738	0/0:13,0:13:36.08:0,36,843	0/0:18,0:18:53.93:0,54,1274
chr10	87388887	.	C	CCCCG	3637.26	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=2.900;DP=423;FS=8.017;HRun=0;HaplotypeScore=74.6021;InbreedingCoeff=0.9726;MQ=60.81;MQ0=0;MQRankSum=-6.173;QD=45.47;ReadPosRankSum=-0.334;VQSLOD=3.7246;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:28:66.14:0,66,1091	1/1:1,3:4:9.03:233,9,0	0/0:12,0:9:12.03:0,12,180	0/0:11,0:11:24.06:0,24,365	0/0:15,0:15:42.14:0,42,786	0/0:23,0:23:60.18:0,60,1061	0/0:16,0:16:45.15:0,45,836	1/1:13,5:17:33.10:793,33,0	0/0:15,0:15:42.14:0,42,741	1/1:4,4:8:15.04:382,15,0	1/1:3,8:11:27.09:679,27,0	0/0:18,0:18:51.17:0,51,954	0/0:11,0:11:30.10:0,30,561	0/0:24,0:24:72.18:0,72,1221	0/0:18,0:18:48.15:0,48,840	0/0:23,0:23:69.21:0,69,1231	1/1:2,5:12:12.04:311,12,0	0/0:17,0:17:51.10:0,51,855	0/0:20,0:20:54.17:0,54,978	0/0:11,0:11:27.98:0,28,493	1/1:6,10:16:27.09:696,27,0	0/0:10,0:10:24.05:0,24,448	0/0:16,0:16:48.16:0,48,893	0/0:16,0:16:45.15:0,45,842	0/0:19,0:19:57.13:0,57,937	1/1:3,7:10:21.07:544,21,0	0/0:16,0:16:45.15:0,45,842	./.
chr10	87390079	.	G	GA	1398.50	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-5.915;DP=460;FS=0.544;HRun=9;HaplotypeScore=51.7410;InbreedingCoeff=0.8625;MQ=56.09;MQ0=9;MQRankSum=-2.763;QD=18.65;ReadPosRankSum=-1.080;VQSLOD=3.3802;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:18.03:0,18,309	0/0:12,0:12:29.99:0,30,260	0/1:13,0:5:0.27:0,0,23	0/0:8,0:3:3:0,3,26	0/0:22,0:23:50.02:0,50,423	0/0:24,0:24:59.95:0,60,516	0/0:8,0:8:17.99:0,18,156	1/1:3,17:18:22.10:462,22,0	0/0:7,0:7:17.99:0,18,156	0/0:27,0:27:39.80:0,40,517	0/0:25,0:25:65.98:0,66,573	0/0:9,0:9:23.98:0,24,205	0/0:14,0:14:38.99:0,39,339	0/0:11,0:11:23.99:0,24,208	0/0:15,0:15:38.99:0,39,338	0/0:10,0:10:23.99:0,24,208	0/0:22,0:22:38.99:0,39,339	0/0:23,0:22:56.98:0,57,495	0/0:16,0:15:35.92:0,36,301	0/0:29,0:29:68.98:0,69,599	1/1:1,11:12:24.06:265,24,0	0/0:16,0:16:44.99:0,45,390	0/0:17,0:17:38.02:0,38,318	0/0:9,0:9:20.97:0,21,182	0/0:22,0:22:62.97:0,63,545	1/1:1,17:18:25.08:505,25,0	0/0:18,0:18:47.99:0,48,417	1/1:1,10:12:9.92:320,10,0
chr10	87391681	.	C	CA	844.24	PASS	AB=0.792;AC=18;AF=0.321;AN=56;BaseQRankSum=3.716;DP=386;FS=1.805;HRun=14;HaplotypeScore=72.9996;InbreedingCoeff=0.2471;MQ=58.91;MQ0=18;MQRankSum=-3.548;QD=4.26;ReadPosRankSum=-2.772;VQSLOD=0.8634;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,15:29:9.30:201,0,9	0/0:7,0:6:8.83:0,9,58	0/1:12,0:7:20.37:20,0,26	0/0:6,0:4:1.36:0,1,13	0/1:13,2:15:17.13:17,0,156	0/1:7,10:18:14.64:145,0,15	1/1:6,5:9:8.04:58,8,0	1/1:9,0:15:23:121,23,0	0/0:9,0:9:13.57:0,14,80	0/0:14,0:14:26.47:0,26,170	0/1:14,1:15:7.73:8,0,78	0/0:7,0:7:13.98:0,14,81	0/0:10,0:9:15.98:0,16,85	0/0:3,0:5:7.94:0,8,44	0/0:10,0:11:13.82:0,14,82	0/0:8,0:6:11.78:0,12,76	0/0:15,0:14:32.50:0,33,210	0/1:6,10:16:14.21:122,0,14	0/0:24,1:24:28.74:0,29,299	0/0:23,0:22:4.18:0,4,179	1/1:3,0:3:2.84:14,3,0	0/1:4,1:5:10.43:32,0,10	0/1:11,1:12:15.56:16,0,37	0/0:10,0:10:17.71:0,18,114	0/0:18,1:19:14.04:0,14,210	1/1:18,0:22:22.17:162,22,0	0/0:13,1:13:24.67:0,25,183	1/1:9,0:16:7.97:102,8,0
chr10	87391718	.	TTTTTTTTTG	T	2976.98	PASS	AB=1.000;AC=14;AF=0.259;AN=54;BaseQRankSum=3.886;DP=362;FS=6.676;HRun=0;HaplotypeScore=122.5770;InbreedingCoeff=0.7607;MQ=63.64;MQ0=3;MQRankSum=-5.192;QD=29.19;ReadPosRankSum=-0.858;VQSLOD=2.5210;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:75.71:0,76,2716	1/1:3,3:6:15.05:361,15,0	0/0:34,0:11:20.60:0,21,279	0/0:21,0:9:8.89:0,9,259	0/0:25,0:25:67.41:0,67,2399	0/0:17,0:17:36.13:0,36,1135	0/0:4,0:4:12.04:0,12,428	1/1:17,0:17:0.99:149,1,0	0/0:10,0:10:27.05:0,27,950	1/1:9,9:18:50.92:970,51,0	1/1:6,9:15:33.84:572,34,0	0/0:7,0:7:21.07:0,21,693	0/0:9,0:9:5.02:0,5,512	./.	0/0:7,0:7:18.03:0,18,630	0/0:5,0:5:11.99:0,12,502	1/1:9,5:14:20.23:542,20,0	0/0:18,0:17:39.04:0,39,1312	0/0:17,0:17:38.16:0,38,1404	0/0:9,0:9:24.05:0,24,778	0/1:1,0:1:0:0,0,0	0/0:3,0:3:9.03:0,9,248	0/0:10,0:10:27.09:0,27,905	0/0:4,0:4:12.04:0,12,515	0/0:21,0:20:60.07:0,60,2061	1/1:18,0:18:25.65:303,26,0	0/0:10,0:10:27.07:0,27,1012	0/1:13,0:12:99:254,0,103
chr10	87391719	.	TTTTTTTTG	T	3004.87	PASS	AB=0.906;AC=14;AF=0.259;AN=54;BaseQRankSum=3.297;DP=364;FS=10.703;HRun=0;HaplotypeScore=114.9647;InbreedingCoeff=0.7936;MQ=62.06;MQ0=4;MQRankSum=-6.177;QD=29.46;ReadPosRankSum=-1.157;VQSLOD=2.2274;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:75.71:0,76,2430	1/1:6,0:6:15.04:284,15,0	0/0:35,0:10:20.33:0,20,251	0/0:21,0:9:7.69:0,8,248	0/0:25,0:25:66.08:0,66,2161	0/0:17,0:17:35.85:0,36,976	0/0:4,0:4:12.04:0,12,380	1/1:17,0:17:37.92:322,38,0	0/0:10,0:10:27.04:0,27,839	1/1:17,1:18:48.08:820,48,0	1/1:13,2:15:34.17:491,34,0	0/0:7,0:7:21.07:0,21,633	0/0:8,0:8:4.93:0,5,457	./.	0/0:7,0:7:18.02:0,18,575	0/0:7,0:7:18:0,18,618	1/1:13,1:13:7.59:434,8,0	0/0:18,0:17:39.03:0,39,1177	0/0:17,0:17:38.13:0,38,1223	0/0:8,0:8:24.06:0,24,693	0/1:1,0:1:0:0,0,0	0/0:4,0:3:9.01:0,9,209	0/0:9,0:9:27.09:0,27,787	0/0:4,0:4:12.04:0,12,459	0/0:22,0:21:63.08:0,63,1923	1/1:17,1:18:45.37:480,45,0	0/0:10,0:10:27.06:0,27,899	0/1:10,3:12:34.90:355,0,35
chr10	87391720	.	TTTTTTTG	T	2996.61	PASS	AB=0.933;AC=14;AF=0.259;AN=54;BaseQRankSum=3.141;DP=368;FS=11.778;HRun=0;HaplotypeScore=104.5041;InbreedingCoeff=0.7975;MQ=61.81;MQ0=4;MQRankSum=-6.676;QD=29.38;ReadPosRankSum=-1.137;VQSLOD=2.3909;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:75.21:0,75,2117	1/1:6,0:6:15.01:255,15,0	0/0:36,0:10:20.22:0,20,230	0/0:21,0:9:6.27:0,6,223	0/0:26,0:26:68.15:0,68,1970	0/0:17,0:17:35.78:0,36,839	0/0:4,0:4:12.04:0,12,325	1/1:15,2:17:41.86:387,42,0	0/0:10,0:10:27.03:0,27,729	1/1:18,0:18:42.52:743,43,0	1/1:15,0:15:31.05:434,31,0	0/0:7,0:7:21.07:0,21,545	0/0:8,0:8:4.86:0,5,403	./.	0/0:7,0:7:18.01:0,18,503	0/0:7,0:7:17.98:0,18,537	1/1:14,0:13:1.87:393,2,0	0/0:18,0:17:38.99:0,39,1020	0/0:17,0:17:38.09:0,38,1047	0/0:8,0:8:24.06:0,24,615	0/1:1,0:1:0:0,0,0	0/0:4,0:3:9.01:0,9,181	0/0:9,0:9:27.09:0,27,667	0/0:4,0:4:12.04:0,12,404	0/0:22,0:21:63.07:0,63,1681	1/1:15,3:18:47.89:570,48,0	0/0:10,0:10:27.05:0,27,786	0/1:11,2:12:3.16:389,0,3
chr10	87391726	.	TG	T	1812.19	PASS	AB=0.967;AC=17;AF=0.327;AN=52;BaseQRankSum=3.978;DP=372;FS=2.035;HRun=1;HaplotypeScore=72.2074;InbreedingCoeff=0.6238;MQ=57.15;MQ0=6;MQRankSum=-6.195;QD=13.94;ReadPosRankSum=-2.108;VQSLOD=2.2020;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:47.47:0,47,521	1/1:5,0:5:14.75:98,15,0	0/0:37,0:8:19.28:0,19,111	0/0:20,1:8:7.44:0,7,64	0/0:28,0:28:54:0,54,500	0/1:18,0:18:4.78:5,0,190	0/0:5,0:5:4.17:0,4,14	1/1:16,0:16:44.82:363,45,0	0/0:11,0:11:4.61:0,5,163	1/1:17,0:17:50.73:392,51,0	1/1:13,1:14:35.68:252,36,0	0/1:7,0:7:12.97:13,0,85	0/0:5,0:5:4.91:0,5,117	./.	0/0:7,0:7:15.28:0,15,98	0/0:8,0:8:18.30:0,18,164	1/1:13,0:12:34.53:237,35,0	0/0:17,0:16:32.75:0,33,286	0/0:19,0:19:4.32:0,4,275	0/0:7,1:8:3.85:0,4,171	./.	0/0:4,0:3:8.66:0,9,57	0/1:8,1:9:41.27:41,0,98	0/0:4,0:4:11.92:0,12,105	0/0:23,1:22:16.90:0,17,414	1/1:17,0:17:50.58:387,51,0	0/0:11,0:11:25.88:0,26,183	1/1:14,0:13:32.39:210,32,0
chr10	87393405	.	CGTGTGTGTGTGTCT	C	501.99	PASS	AB=0.833;AC=9;AF=0.161;AN=56;BaseQRankSum=1.077;DP=513;FS=6.182;HRun=0;HaplotypeScore=160.6148;InbreedingCoeff=0.6934;MQ=41.58;MQ0=57;MQRankSum=-2.072;QD=9.47;ReadPosRankSum=-0.673;VQSLOD=2.2150;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:23:23.62:0,24,245	1/1:4,3:7:3.01:121,3,0	0/0:26,0:4:9.36:0,9,96	0/0:32,0:10:23.68:0,24,179	0/0:15,0:15:24.08:0,24,327	0/0:16,0:15:20.59:0,21,846	0/0:13,0:12:24.05:0,24,853	0/0:30,0:20:57:0,57,735	0/0:21,0:21:38.81:0,39,1497	1/1:15,0:14:26.90:221,27,0	1/1:2,11:13:3.01:54,3,0	0/0:19,0:14:26.99:0,27,1261	0/0:13,0:12:24.03:0,24,1092	0/0:15,0:14:17.56:0,18,788	0/0:26,0:23:36.09:0,36,1065	0/0:20,0:18:26.72:0,27,1226	1/1:12,1:12:17.86:227,18,0	0/0:20,0:18:46.13:0,46,1464	0/0:16,0:14:35.34:0,35,969	0/0:20,0:17:33.07:0,33,1223	0/0:20,0:17:23.88:0,24,182	0/0:14,0:14:23.30:0,23,620	0/0:19,0:18:26.17:0,26,953	0/0:34,0:28:59.53:0,60,2278	0/0:8,0:8:8.54:0,9,203	0/0:19,0:18:3.06:0,3,473	0/0:15,0:14:39.11:0,39,1626	0/1:4,0:5:24.71:25,0,66
chr10	87393418	.	CTGTGTGTG	C	633.03	PASS	AB=0.927;AC=12;AF=0.240;AN=50;BaseQRankSum=3.800;DP=559;FS=0.000;HRun=0;HaplotypeScore=145.0551;InbreedingCoeff=0.6432;MQ=43.05;MQ0=46;MQRankSum=-2.256;QD=5.36;ReadPosRankSum=-1.998;VQSLOD=1.4820;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:4,0:4:3.01:53,3,0	./.	./.	0/0:15,0:15:5.98:0,6,166	0/0:17,0:17:17.46:0,17,471	0/0:14,0:14:20.94:0,21,599	0/1:29,6:27:39.65:122,0,40	0/0:25,0:23:26.13:0,26,878	0/0:10,0:10:2.99:0,3,24	0/1:11,0:11:0:0,0,0	0/0:18,0:18:33.04:0,33,903	0/0:16,0:14:27.08:0,27,702	0/0:18,0:18:14.60:0,15,435	0/0:13,0:26:8.29:0,8,291	0/0:21,0:20:23.51:0,24,724	1/1:16,0:12:3.90:55,4,0	0/0:22,0:22:37.62:0,38,982	0/0:24,0:17:24.08:0,24,760	0/0:20,0:19:20.23:0,20,632	1/1:23,0:19:9.49:103,9,0	0/0:15,0:16:8.65:0,9,194	0/0:13,0:15:20.44:0,20,520	0/0:37,0:30:42.04:0,42,1366	0/0:12,0:12:8.38:0,8,261	1/1:13,7:20:22.29:354,22,0	0/0:13,0:15:35.86:0,36,863	1/1:1,7:8:5.99:93,6,0
chr10	87394299	.	T	TAC	5594.04	PASS	AB=0.646;AC=13;AF=0.232;AN=56;BaseQRankSum=-6.692;DP=1024;FS=3.733;HRun=0;HaplotypeScore=177.2347;InbreedingCoeff=0.7030;MQ=48.81;MQ0=42;MQRankSum=2.383;QD=18.10;ReadPosRankSum=-0.270;VQSLOD=4.9009;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,102,1238	1/1:2,6:8:9.03:141,9,0	0/0:45,0:10:21.06:0,21,255	0/0:61,0:13:15.99:0,16,140	0/0:22,0:22:30.09:0,30,366	0/0:22,0:22:30.08:0,30,354	0/0:38,0:38:75.23:0,75,911	1/1:56,15:59:6.20:575,6,0	0/0:32,0:33:72.03:0,72,842	1/1:20,13:25:18.85:498,19,0	1/1:12,9:21:33.11:501,33,0	0/0:46,0:47:80.03:0,80,1062	0/0:35,0:35:75.17:0,75,875	0/0:30,0:30:69.22:0,69,843	0/0:41,0:41:87.24:0,87,1034	0/0:40,0:40:78.24:0,78,952	0/1:15,15:30:2.25:884,0,2	0/0:30,0:31:79.01:0,79,863	0/0:35,0:24:50.73:0,51,560	0/0:28,0:28:48.45:0,48,565	0/1:68,37:101:39.04:2058,0,39	0/0:34,0:35:51.45:0,51,583	0/0:31,0:31:50.98:0,51,588	0/0:54,0:54:99:0,119,1409	0/0:17,0:18:33.10:0,33,403	1/1:16,17:29:31.30:848,31,0	0/0:19,0:19:27.08:0,27,330	0/1:1,7:8:26.65:88,0,27
chr10	87394366	.	AAC	A	241.47	PASS	AB=0.939;AC=16;AF=0.308;AN=52;BaseQRankSum=3.826;DP=754;FS=6.930;HRun=0;HaplotypeScore=146.9055;InbreedingCoeff=-0.1480;MQ=51.39;MQ0=33;MQRankSum=1.436;QD=0.63;ReadPosRankSum=0.866;VQSLOD=1.8078;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:24:8.28:0,8,56	0/0:9,0:8:2.90:0,3,16	./.	./.	0/0:16,0:16:5.83:0,6,78	0/1:18,1:19:17.40:17,0,119	0/0:35,0:36:15.56:0,16,303	0/0:42,0:41:4.21:0,4,13	0/0:20,0:20:12.02:0,12,137	0/1:20,0:21:2.80:3,0,121	0/0:14,0:15:15.03:0,15,185	0/1:33,3:36:99:114,0,290	0/0:19,0:19:10.58:0,11,130	0/1:25,0:25:6.56:7,0,266	0/0:34,3:37:6.07:0,6,464	0/1:32,1:33:22.70:23,0,456	0/0:17,0:20:12.65:0,13,209	0/1:25,1:26:33.46:33,0,190	0/1:23,1:21:11.36:11,0,220	0/1:15,0:15:23.46:23,0,80	1/1:60,0:61:3.56:34,4,0	0/1:19,1:21:18.27:18,0,202	0/0:23,0:23:6.02:0,6,89	0/1:39,6:44:1.71:2,0,407	0/0:11,0:12:11.92:0,12,131	0/1:21,0:21:15.26:15,0,35	0/1:14,4:18:11.68:12,0,208	1/1:9,0:12:16.35:75,16,0
chr10	87397912	.	CT	C	2139.25	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.749;DP=700;FS=1.612;HRun=2;HaplotypeScore=68.8383;InbreedingCoeff=0.9762;MQ=79.81;MQ0=0;MQRankSum=-0.651;QD=32.41;ReadPosRankSum=1.138;VQSLOD=3.6062;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:99:0,120,1767	1/1:0,7:7:18.06:234,18,0	0/0:15,0:15:45.10:0,45,599	0/0:18,0:18:16.77:0,17,433	0/0:16,0:16:45.10:0,45,629	0/0:19,0:19:57.19:0,57,852	0/0:28,0:28:81.26:0,81,1193	0/0:24,0:24:72.22:0,72,1024	0/0:26,0:26:75.24:0,75,1103	1/1:0,19:19:57.19:740,57,0	1/1:0,9:9:18.06:234,18,0	0/0:33,0:33:99:0,99,1463	0/0:26,0:26:78.24:0,78,1144	0/0:34,0:34:99:0,102,1476	0/0:30,0:30:90.30:0,90,1349	0/0:22,0:22:66.21:0,66,962	1/1:0,31:31:84.27:1091,84,0	0/0:33,0:33:99:0,99,1478	0/0:22,0:22:54.17:0,54,792	0/0:11,0:11:27.09:0,27,403	0/0:66,0:65:99:0,178,2620	0/0:24,0:24:72.24:0,72,1059	0/0:20,0:20:57.18:0,57,829	0/0:52,0:52:99:0,150,2198	0/0:26,0:26:72.23:0,72,1041	0/0:22,0:22:39.46:0,39,880	0/0:22,0:22:60.20:0,60,899	0/0:3,0:3:9.03:0,9,135
chr10	87399830	.	CTCT	C	809.60	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=4.537;DP=518;FS=0.649;HRun=0;HaplotypeScore=86.0825;InbreedingCoeff=0.5787;MQ=81.18;MQ0=6;MQRankSum=-7.194;QD=9.10;ReadPosRankSum=-4.423;VQSLOD=1.3863;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:61.66:62,0,544	1/1:2,2:4:3.01:39,3,0	0/0:39,0:22:49.69:0,50,920	0/0:40,0:29:50.37:0,50,741	0/0:11,0:11:33.10:0,33,686	0/0:21,0:21:57.18:0,57,1239	0/0:19,0:19:51.17:0,51,1154	0/0:20,0:20:6.18:0,6,439	0/0:20,0:20:54.15:0,54,1099	1/1:6,0:6:15.02:198,15,0	1/1:7,0:7:12.04:176,12,0	0/0:20,0:20:54.12:0,54,1053	0/0:15,0:15:42.13:0,42,897	0/0:19,0:19:54.15:0,54,1112	0/0:25,0:25:66.15:0,66,1236	0/0:23,0:23:63.18:0,63,1274	1/1:6,3:9:27.04:385,27,0	0/0:25,0:25:71.95:0,72,1227	0/0:22,0:22:33.83:0,34,1110	0/0:3,0:3:9.03:0,9,177	0/1:21,0:21:11.50:11,0,479	0/0:25,0:25:69.14:0,69,1346	0/0:11,0:11:33.09:0,33,662	0/0:33,0:33:94.09:0,94,1864	0/0:14,0:14:39.13:0,39,898	0/1:16,0:16:99:99,0,294	0/0:14,0:14:39.08:0,39,716	0/0:7,0:7:18.06:0,18,222
chr10	87399835	.	CCCCT	C	449.65	PASS	AB=0.600;AC=5;AF=0.089;AN=56;BaseQRankSum=7.542;DP=504;FS=0.000;HRun=0;HaplotypeScore=94.4105;InbreedingCoeff=0.6958;MQ=73.98;MQ0=6;MQRankSum=-5.924;QD=21.41;ReadPosRankSum=-0.157;VQSLOD=3.1685;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.23:0,69,1632	0/0:3,0:3:0:0,0,0	0/0:36,0:16:36.12:0,36,782	0/0:43,0:26:35.23:0,35,668	0/0:10,0:10:27.09:0,27,695	0/0:20,0:20:57.20:0,57,1525	0/0:21,0:21:63.21:0,63,1505	0/0:17,0:17:45.15:0,45,1142	0/0:16,0:16:45.15:0,45,1187	1/1:2,4:6:14.84:178,15,0	1/1:2,4:6:12.04:165,12,0	0/0:17,0:17:45.15:0,45,1195	0/0:15,0:15:45.15:0,45,1063	0/0:20,0:20:57.20:0,57,1533	0/0:24,0:24:66.22:0,66,1609	0/0:26,0:26:75.24:0,75,1797	0/1:3,6:9:5.94:228,0,6	0/0:25,0:25:72.22:0,72,1759	0/0:22,0:22:66.09:0,66,1426	0/0:4,0:4:9.03:0,9,245	0/0:19,0:19:45.11:0,45,1158	0/0:24,0:24:69.22:0,69,1691	0/0:11,0:11:30.10:0,30,821	0/0:33,0:34:91.36:0,91,2583	0/0:14,0:14:20.13:0,20,1001	0/0:13,1:14:1.27:0,1,884	0/0:16,0:16:42.14:0,42,972	0/0:7,0:7:18.06:0,18,492
chr10	87399836	.	CCCT	C	451.63	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=6.894;DP=498;FS=0.961;HRun=0;HaplotypeScore=84.3243;InbreedingCoeff=0.8759;MQ=72.86;MQ0=6;MQRankSum=-6.827;QD=21.51;ReadPosRankSum=0.467;VQSLOD=3.5851;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.17:0,66,1147	./.	0/0:36,0:15:33.10:0,33,557	0/0:43,0:26:21.95:0,22,380	0/0:9,0:9:24.08:0,24,500	0/0:20,0:20:57.18:0,57,1091	0/0:21,0:21:51.17:0,51,1037	0/0:17,0:17:39.13:0,39,794	0/0:16,0:16:45.14:0,45,840	1/1:5,1:6:15.05:196,15,0	1/1:4,2:6:12.04:156,12,0	0/0:16,0:16:45.15:0,45,922	0/0:15,0:15:36.09:0,36,695	0/0:20,0:20:57.19:0,57,1075	0/0:22,0:22:60.20:0,60,1165	0/0:26,0:26:63.20:0,63,1260	1/1:9,0:9:18.06:233,18,0	0/0:24,0:24:60.21:0,60,1264	0/0:21,0:22:45.15:0,45,897	0/0:4,0:4:9.03:0,9,191	0/0:18,0:18:42.14:0,42,856	0/0:24,0:24:57.18:0,57,1155	0/0:11,0:11:30.10:0,30,639	0/0:34,0:34:96.32:0,96,1919	0/0:14,0:14:34.09:0,34,742	0/0:14,0:14:0.60:0,1,668	0/0:16,0:16:33.11:0,33,687	0/0:7,0:7:18.06:0,18,364
chr10	87401402	.	C	CCCAT	2450.39	PASS	AB=0.736;AC=11;AF=0.220;AN=50;BaseQRankSum=-6.644;DP=737;FS=0.000;HRun=0;HaplotypeScore=118.6361;InbreedingCoeff=0.8595;MQ=50.28;MQ0=37;MQRankSum=2.730;QD=17.38;ReadPosRankSum=-0.364;VQSLOD=3.2817;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:37:37.28:0,37,336	1/1:10,5:15:11.84:266,12,0	./.	./.	1/1:11,8:19:24.08:556,24,0	0/0:17,0:17:18.02:0,18,247	0/0:27,0:26:20.63:0,21,290	./.	0/0:8,0:26:42.52:0,43,392	1/1:16,8:25:27.06:532,27,0	1/1:17,6:23:12.04:261,12,0	0/0:39,0:38:51.13:0,51,742	0/0:20,0:20:30.08:0,30,408	0/0:19,0:18:27:0,27,331	0/0:25,0:24:36.09:0,36,520	0/0:40,0:40:81.25:0,81,1181	0/1:25,12:39:9.34:724,0,9	0/0:20,0:20:30.03:0,30,388	0/0:25,0:21:21.07:0,21,313	0/0:14,0:14:15.03:0,15,206	0/0:40,0:35:51.16:0,51,753	0/0:25,0:25:21.07:0,21,316	1/1:12,8:19:12.51:279,13,0	0/0:30,0:30:54.11:0,54,765	0/0:20,0:19:33.11:0,33,499	0/0:27,0:25:30.06:0,30,395	0/0:23,0:22:42.11:0,42,593	0/0:8,0:8:12.04:0,12,179
chr10	87402391	.	AC	A	1661.52	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.161;DP=496;FS=6.536;HRun=2;HaplotypeScore=60.6373;InbreedingCoeff=0.9306;MQ=89.58;MQ0=0;MQRankSum=-0.906;QD=32.58;ReadPosRankSum=2.294;VQSLOD=3.3741;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.15:0,69,983	1/1:0,5:5:15.05:194,15,0	0/0:25,0:25:69.11:0,69,931	0/0:18,0:18:48.02:0,48,660	0/0:13,0:13:36.11:0,36,516	0/0:18,0:18:51.16:0,51,738	0/0:25,0:25:75.21:0,75,1091	0/0:24,0:24:66.12:0,66,902	0/0:22,0:22:63.21:0,63,940	1/1:2,17:19:54.17:690,54,0	1/1:0,4:4:9.03:117,9,0	0/0:31,0:31:90.27:0,90,1278	0/0:20,0:20:57.19:0,57,846	0/0:22,0:22:66.20:0,66,941	0/0:19,0:19:54.18:0,54,805	0/0:16,0:16:48.16:0,48,716	1/1:0,23:23:63.20:815,63,0	0/0:27,0:27:75.25:0,75,1116	0/0:15,0:15:45.09:0,45,625	0/0:11,0:11:33.09:0,33,471	0/0:39,0:39:99:0,111,1637	0/0:5,0:5:15.04:0,15,204	0/0:7,0:7:21.07:0,21,313	0/0:17,0:17:51.14:0,51,738	0/0:14,0:14:39.11:0,39,544	0/0:15,1:16:6.19:0,6,588	0/0:14,0:14:42.10:0,42,603	0/0:3,0:3:9.03:0,9,135
chr10	87408638	.	CT	C	6621.90	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.682;DP=617;FS=1.091;HRun=2;HaplotypeScore=63.6183;InbreedingCoeff=0.9982;MQ=81.91;MQ0=0;MQRankSum=-3.885;QD=35.41;ReadPosRankSum=-0.250;VQSLOD=5.0525;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1637	1/1:0,7:7:18.06:234,18,0	0/0:15,0:15:41.54:0,42,530	0/0:19,0:19:45.09:0,45,627	0/0:13,0:13:39.12:0,39,562	0/0:21,0:21:60.17:0,60,875	0/0:33,0:33:99:0,99,1460	1/1:0,19:19:57.19:740,57,0	0/0:20,0:20:60.19:0,60,878	1/1:0,12:12:36.12:467,36,0	1/1:0,12:12:33.11:428,33,0	0/0:26,0:26:78.25:0,78,1130	0/0:18,0:18:54.18:0,54,809	0/0:14,0:14:42.14:0,42,629	0/0:16,0:16:48.15:0,48,701	0/0:20,0:20:60.20:0,60,899	1/1:2,40:42:99:1441,111,0	0/0:37,0:37:99:0,105,1574	0/0:24,0:24:66.19:0,66,949	0/0:10,0:10:30.10:0,30,449	1/1:0,63:63:99:2182,169,0	0/0:15,0:15:45.14:0,45,655	0/0:10,0:10:30.10:0,30,449	0/0:39,0:39:99:0,117,1753	0/0:22,0:22:66.22:0,66,989	1/1:1,20:21:60.19:779,60,0	0/0:21,0:21:63.21:0,63,944	1/1:0,11:11:27.09:351,27,0
chr10	87408794	.	TTTTG	T	4816.29	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.376;DP=635;FS=5.044;HRun=0;HaplotypeScore=116.2849;InbreedingCoeff=0.9966;MQ=70.71;MQ0=2;MQRankSum=-2.417;QD=29.91;ReadPosRankSum=2.011;VQSLOD=4.4971;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,105,2519	1/1:3,8:11:21.07:347,21,0	0/0:23,0:22:24.03:0,24,536	0/0:19,0:19:30.57:0,31,653	0/0:20,0:20:50.95:0,51,1137	0/0:20,0:20:60.21:0,60,1425	0/0:28,0:28:63.18:0,63,1393	1/1:7,17:24:51.11:762,51,0	0/0:30,0:30:69.21:0,69,1552	1/1:6,19:24:54.17:868,54,0	1/1:4,15:18:33.06:514,33,0	0/0:21,0:21:42.13:0,42,943	0/0:20,0:20:33.11:0,33,807	0/0:19,0:19:45.15:0,45,1076	0/0:31,0:31:78.24:0,78,1772	0/0:32,0:32:81.26:0,81,1878	1/1:6,22:27:54.14:892,54,0	0/0:25,0:25:60.17:0,60,1356	0/0:23,0:23:39.13:0,39,907	0/0:21,0:21:57.20:0,57,1363	1/1:6,11:17:18.06:297,18,0	0/0:12,0:12:30.09:0,30,685	0/0:14,0:14:33.10:0,33,728	0/0:26,0:26:60.21:0,60,1451	0/0:14,0:14:30.10:0,30,705	1/1:11,18:29:51.14:788,51,0	0/0:33,0:33:84.25:0,84,1934	1/1:1,7:8:21.07:346,21,0
chr10	87409853	.	A	ATACGCCCACAGTCCACCTCCACCCAC	12963.11	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=1.277;DP=568;FS=15.990;HRun=0;HaplotypeScore=351.6997;InbreedingCoeff=0.9536;MQ=87.88;MQ0=0;MQRankSum=-12.002;QD=127.09;ReadPosRankSum=-3.294;VQSLOD=3.2265;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:14,1:22:27.09:1895,27,0	0/0:10,0:10:12.04:0,12,648	0/0:19,0:20:51.17:0,51,1774	0/0:28,0:28:57.16:0,57,2012	0/0:27,0:27:66.23:0,66,3524	0/0:18,0:18:39.13:0,39,2335	0/0:27,0:27:78.25:0,78,4425	1/1:25,0:37:84.27:4775,84,0	0/0:19,0:19:54.19:0,54,3422	0/0:20,0:20:57.20:0,57,3070	0/0:12,0:12:33.11:0,33,2158	0/0:16,0:16:39.12:0,39,2266	0/0:17,0:17:42.14:0,42,2643	0/0:16,0:16:45.15:0,45,2445	0/0:25,0:25:66.23:0,66,3988	0/0:16,0:16:42.12:0,42,2144	0/0:27,0:27:72.20:0,72,3932	0/0:18,0:18:51.17:0,51,2657	0/0:25,0:25:56.28:0,56,2295	0/0:26,0:26:72.23:0,72,3749	1/1:8,0:8:9.03:328,9,0	0/0:18,0:18:51.17:0,51,2974	0/0:31,0:31:75.23:0,75,3975	0/0:20,0:20:48.16:0,48,2248	0/0:11,0:11:33.09:0,33,1696	1/1:20,3:29:75.26:5255,75,0	0/0:19,0:19:51.17:0,51,2627	1/1:1,1:6:6.02:710,6,0
chr10	87410189	.	G	GTT	3783.41	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=4.150;DP=653;FS=10.315;HRun=12;HaplotypeScore=94.4197;InbreedingCoeff=0.9537;MQ=75.31;MQ0=1;MQRankSum=-1.468;QD=18.73;ReadPosRankSum=-4.164;VQSLOD=1.0032;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,35:43:86.05:1150,86,0	1/1:1,0:5:12.02:115,12,0	0/0:22,0:18:16.05:0,16,134	0/0:18,0:16:12.30:0,12,64	0/0:25,0:28:58.50:0,58,516	0/0:20,0:24:10.57:0,11,342	0/0:18,0:20:26.40:0,26,320	1/1:20,0:30:35.27:305,35,0	0/0:22,0:22:54.01:0,54,499	1/1:7,2:27:63.54:656,64,0	1/1:5,0:18:36.08:390,36,0	0/0:28,0:28:68.92:0,69,618	0/0:27,0:27:74.76:0,75,678	0/0:17,0:21:42.31:0,42,437	0/0:29,0:32:59.54:0,60,586	0/0:26,0:29:56.28:0,56,542	1/1:9,4:22:36.07:385,36,0	0/0:16,0:18:50.54:0,51,440	0/0:15,0:15:29.65:0,30,254	0/0:26,0:26:55.53:0,56,504	1/1:12,0:23:24.88:225,25,0	0/0:15,0:17:32.37:0,32,267	0/0:21,0:22:50.65:0,51,456	0/0:24,0:27:50.77:0,51,488	0/0:24,0:24:62.61:0,63,560	1/1:12,0:29:51.09:530,51,0	0/0:28,0:29:65.64:0,66,595	1/1:1,0:2:3:29,3,0
chr10	87411576	.	TCTC	T	5577.13	PASS	AB=0.531;AC=9;AF=0.161;AN=56;BaseQRankSum=11.085;DP=672;FS=14.038;HRun=0;HaplotypeScore=107.6047;InbreedingCoeff=0.8637;MQ=78.29;MQ0=2;MQRankSum=-1.140;QD=39.55;ReadPosRankSum=2.791;VQSLOD=5.4045;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:39:84.24:1336,84,0	0/0:5,0:5:15.05:0,15,340	0/0:36,0:34:72.35:0,72,1385	0/0:44,0:37:89.37:0,89,1675	0/0:18,0:18:48.16:0,48,1064	0/0:15,0:15:45.15:0,45,1019	0/0:26,0:26:69.24:0,69,1520	1/1:1,19:20:57.14:866,57,0	0/0:22,0:22:66.23:0,66,1482	0/0:22,0:22:66.22:0,66,1453	0/0:12,0:12:33.11:0,33,727	0/0:34,0:34:99:0,102,2191	0/0:9,0:9:27.09:0,27,609	0/0:19,0:19:54.19:0,54,1223	0/0:30,0:30:90.31:0,90,2005	0/0:18,0:18:54.17:0,54,1145	0/0:39,0:39:99:0,111,2470	0/0:19,0:19:54.19:0,54,1222	0/0:15,0:15:45.15:0,45,969	0/0:24,0:24:69.24:0,69,1544	1/1:3,43:46:99:1731,107,0	0/0:29,0:29:87.28:0,87,1854	0/0:13,0:13:39.13:0,39,854	0/0:37,0:37:99:0,99,2132	0/0:16,0:16:48.12:0,48,1035	0/1:2,15:17:84.87:696,0,85	0/0:28,0:28:81.28:0,81,1789	1/1:0,19:19:57.19:949,57,0
chr10	87412560	.	AT	A	1497.18	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=6.379;DP=419;FS=1.626;HRun=4;HaplotypeScore=53.4147;InbreedingCoeff=0.8898;MQ=68.61;MQ0=7;MQRankSum=-2.849;QD=9.98;ReadPosRankSum=-2.881;VQSLOD=-0.1256;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:20.23:121,20,0	1/1:1,6:7:11.94:110,12,0	0/1:26,0:12:14.67:15,0,148	0/0:16,0:8:20.80:0,21,217	0/0:13,0:13:18.46:0,18,364	0/0:19,0:19:48.13:0,48,619	0/0:12,0:12:31.32:0,31,387	1/1:16,0:13:17.14:113,17,0	0/0:18,0:17:47.87:0,48,541	1/1:1,12:13:32.96:302,33,0	1/1:2,8:10:17.94:190,18,0	0/0:10,0:10:29.87:0,30,360	0/0:10,0:10:20.92:0,21,258	0/0:10,0:10:30.04:0,30,326	0/0:24,0:24:63.10:0,63,644	0/0:20,0:20:17.63:0,18,518	1/1:1,29:30:53.38:610,53,0	0/0:29,0:29:81.20:0,81,1040	0/0:19,1:20:25.90:0,26,559	0/0:13,0:13:27.33:0,27,330	1/1:8,0:7:10.17:69,10,0	0/0:9,0:9:24.03:0,24,271	0/0:4,0:4:11.99:0,12,143	0/0:12,0:12:36.03:0,36,411	0/0:10,0:10:24.04:0,24,280	1/1:16,0:15:17.52:99,18,0	0/0:20,0:19:48.51:0,49,524	1/1:11,0:10:10.80:78,11,0
chr10	87412563	.	T	TAAA	367.33	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=4.519;DP=428;FS=0.892;HRun=0;HaplotypeScore=77.2281;InbreedingCoeff=0.6070;MQ=68.64;MQ0=7;MQRankSum=-2.683;QD=4.77;ReadPosRankSum=-2.154;VQSLOD=1.6668;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,6:14:10.17:166,10,0	0/1:7,0:7:7.94:8,0,54	0/0:26,0:13:10.61:0,11,337	0/0:17,0:9:24.06:0,24,369	0/0:11,0:11:33.11:0,33,581	0/0:22,0:22:60.18:0,60,1012	0/0:13,0:13:39.11:0,39,635	1/1:12,2:11:0.84:95,1,0	0/0:17,0:16:51.15:0,51,858	0/1:12,0:12:30.23:30,0,65	0/0:8,0:9:3.99:0,4,110	0/0:11,0:11:30.10:0,30,531	0/0:11,0:11:30.10:0,30,503	0/0:10,0:10:30.10:0,30,532	0/0:24,0:24:72.16:0,72,1127	0/0:20,0:20:58.98:0,59,972	0/0:35,0:35:65.45:0,65,503	0/0:28,0:28:84.29:0,84,1521	0/0:22,0:22:60.04:0,60,974	0/0:17,0:17:42.09:0,42,644	1/1:4,0:5:4.45:39,4,0	0/0:10,0:10:27.04:0,27,436	0/0:4,0:4:12.04:0,12,206	0/0:13,0:13:35.42:0,35,599	0/0:12,0:12:26.72:0,27,438	1/1:13,1:14:11.91:161,12,0	0/0:19,0:18:54.18:0,54,940	1/1:5,0:9:2.96:20,3,0
chr10	87413546	.	T	TA	216.42	PASS	AB=1.000;AC=8;AF=0.148;AN=54;BaseQRankSum=6.070;DP=588;FS=0.719;HRun=0;HaplotypeScore=98.6434;InbreedingCoeff=0.6714;MQ=61.52;MQ0=19;MQRankSum=-1.288;QD=4.51;ReadPosRankSum=1.564;VQSLOD=3.4573;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:33.85:0,34,250	0/0:10,0:10:26.85:0,27,291	0/0:43,0:9:14.94:0,15,120	0/0:61,0:21:16.32:0,16,124	0/0:33,0:33:87.96:0,88,1138	1/1:12,1:13:27.64:163,28,0	1/1:2,1:3:5.70:31,6,0	0/0:33,0:32:58.77:0,59,421	0/1:15,0:15:8.50:9,0,40	0/0:27,0:27:58.39:0,58,776	0/0:29,0:29:77.80:0,78,907	0/0:15,0:15:42.32:0,42,484	0/0:20,0:19:54.02:0,54,665	0/0:21,0:21:56.41:0,56,655	0/0:9,0:9:22.73:0,23,283	0/0:13,0:13:32.90:0,33,267	0/0:20,0:19:49.14:0,49,631	1/1:8,3:11:19.58:135,20,0	0/0:24,0:24:66.15:0,66,811	0/0:29,0:28:71.92:0,72,976	0/0:6,0:6:14.60:0,15,95	./.	0/1:5,0:5:19.63:22,0,20	0/0:20,0:20:57.09:0,57,685	0/0:25,0:25:72.15:0,72,900	0/0:33,0:31:72.60:0,73,475	0/0:20,0:20:58.18:0,58,712	0/0:12,0:12:26.11:0,26,176
chr10	87413547	.	T	TG	228.10	PASS	AB=0.895;AC=9;AF=0.167;AN=54;BaseQRankSum=8.145;DP=590;FS=2.724;HRun=0;HaplotypeScore=97.2118;InbreedingCoeff=-0.0344;MQ=61.43;MQ0=19;MQRankSum=-0.600;QD=1.80;ReadPosRankSum=0.508;VQSLOD=2.4073;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:26.89:0,27,229	0/0:10,0:10:26.87:0,27,297	0/0:45,0:9:14.63:0,15,116	0/0:61,0:22:6.53:0,7,110	0/0:33,0:33:87.96:0,88,1145	0/1:12,0:13:15.60:16,0,92	1/1:3,0:3:1.50:7,2,0	0/1:32,1:32:99:110,0,109	0/1:15,0:15:9.20:9,0,39	0/0:26,0:26:58.33:0,58,741	0/0:29,0:29:83.64:0,84,948	0/0:15,0:15:43.56:0,44,501	0/0:21,0:20:54.02:0,54,664	0/0:21,0:21:59.42:0,59,691	0/0:9,0:9:20.66:0,21,282	0/0:13,0:13:32.90:0,33,268	0/0:21,0:20:49.14:0,49,631	0/1:9,0:11:7.62:8,0,31	0/0:24,0:24:66.14:0,66,808	0/0:29,0:28:72.45:0,72,982	0/1:6,0:6:8.58:9,0,47	./.	0/0:5,0:5:8.74:0,9,55	0/0:20,0:20:57.10:0,57,686	0/0:25,0:25:72.15:0,72,904	0/1:20,11:31:99:117,0,120	0/0:20,0:20:58.20:0,58,718	0/1:10,2:12:30.34:79,0,30
chr10	87413551	.	T	TTA	232.11	PASS	AB=0.969;AC=6;AF=0.111;AN=54;BaseQRankSum=4.924;DP=582;FS=0.774;HRun=0;HaplotypeScore=107.4744;InbreedingCoeff=0.5320;MQ=59.41;MQ0=16;MQRankSum=-1.196;QD=3.52;ReadPosRankSum=1.020;VQSLOD=2.5815;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:81.60:98,0,82	0/0:11,0:11:9.89:0,10,277	0/0:38,0:7:14.94:0,15,132	0/0:57,0:19:25.78:0,26,193	0/0:30,0:30:86.80:0,87,1139	0/1:14,1:14:23.34:43,0,23	1/1:2,1:3:8.93:74,9,0	0/0:33,0:32:57.94:0,58,445	0/0:15,0:15:25.53:0,26,139	0/0:26,0:26:62.47:0,62,755	0/0:30,0:30:80.27:0,80,981	0/0:15,0:15:43.61:0,44,533	0/0:19,0:18:51.16:0,51,688	0/0:20,0:20:56.88:0,57,675	0/0:8,0:8:23.84:0,24,279	0/0:13,0:13:32.98:0,33,292	0/0:23,0:22:62.91:0,63,750	1/1:10,3:13:14.16:144,14,0	0/0:27,0:27:72.17:0,72,897	0/0:31,0:30:86.62:0,87,1092	0/0:6,0:6:17.33:0,17,112	./.	0/0:3,0:3:2.58:0,3,13	0/0:20,0:20:54.12:0,54,688	0/0:25,0:25:69.20:0,69,920	0/0:32,0:30:73.99:0,74,581	0/0:21,0:21:60.74:0,61,765	0/0:13,0:13:34.37:0,34,267
chr10	87413554	.	TTTG	T	792.62	PASS	AB=0.959;AC=12;AF=0.222;AN=54;BaseQRankSum=5.674;DP=575;FS=1.062;HRun=0;HaplotypeScore=110.3605;InbreedingCoeff=0.4999;MQ=59.83;MQ0=15;MQRankSum=-6.452;QD=6.72;ReadPosRankSum=-5.517;VQSLOD=0.8647;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:41.74:0,42,615	0/0:11,0:11:30.88:0,31,417	0/0:38,0:9:20.79:0,21,197	0/0:53,0:16:10.68:0,11,111	0/0:28,0:28:78.22:0,78,1276	0/1:14,0:13:8.86:92,0,9	1/1:3,0:3:7.99:52,8,0	0/1:27,5:31:81.78:342,0,82	0/0:15,0:15:27.05:0,27,305	0/0:26,0:26:65.22:0,65,954	0/0:29,0:29:80.83:0,81,1145	0/0:14,0:14:16.21:0,16,535	0/0:19,0:18:49.96:0,50,759	0/0:18,0:18:47.80:0,48,748	0/0:7,0:7:21.01:0,21,298	0/0:13,0:13:32.68:0,33,253	0/0:25,0:24:68.51:0,69,865	1/1:12,0:12:12.45:104,12,0	0/0:27,0:27:63.51:0,64,954	0/0:30,0:29:80.96:0,81,1349	0/1:6,0:6:7.57:31,0,8	./.	1/1:3,0:3:0.47:1,0,0	0/0:21,0:21:56.85:0,57,768	0/0:23,0:23:56.90:0,57,912	0/1:32,1:31:99:138,0,142	0/0:24,0:24:56.61:0,57,849	1/1:15,0:15:11.89:184,12,0
chr10	87413679	.	C	CA	10689.70	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-2.566;DP=568;FS=1.403;HRun=1;HaplotypeScore=71.3480;InbreedingCoeff=0.9905;MQ=80.00;MQ0=0;MQRankSum=-2.921;QD=43.45;ReadPosRankSum=2.008;VQSLOD=4.9126;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,41:43:99:1822,114,0	0/0:5,0:5:15.05:0,15,209	0/0:11,0:11:33.11:0,33,460	0/0:17,0:17:47.94:0,48,610	0/0:13,0:13:39.13:0,39,545	1/1:0,20:20:54.18:863,54,0	1/1:0,30:30:81.23:1267,81,0	1/1:0,31:31:90.29:1415,90,0	0/0:15,0:15:42.14:0,42,584	0/0:25,0:25:66.22:0,66,922	0/0:12,0:12:36.12:0,36,503	0/0:19,0:19:51.16:0,51,694	0/0:16,0:16:42.13:0,42,569	0/0:20,0:20:57.18:0,57,780	0/0:10,0:10:30.10:0,30,419	0/0:22,0:22:63.20:0,63,862	0/0:25,0:25:72.24:0,72,1004	1/1:0,24:24:63.21:1007,63,0	0/0:28,0:28:84.27:0,84,1156	0/0:14,0:14:36.11:0,36,486	1/1:0,55:55:99:2351,148,0	1/1:0,4:4:12.04:192,12,0	1/1:0,6:6:15.05:240,15,0	0/0:32,0:32:96.28:0,96,1316	0/0:16,0:16:48.16:0,48,671	1/1:1,19:20:57.19:910,57,0	0/0:22,0:22:63.21:0,63,879	1/1:0,13:13:39.13:623,39,0
chr10	87415116	.	T	TC	1037.43	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=7.909;DP=601;FS=0.000;HRun=1;HaplotypeScore=94.0139;InbreedingCoeff=0.8863;MQ=54.18;MQ0=26;MQRankSum=-1.827;QD=8.87;ReadPosRankSum=2.581;VQSLOD=1.1689;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:72.41:0,72,542	0/0:2,0:2:0.89:0,1,2	0/0:62,0:8:19.65:0,20,135	0/0:63,0:16:17.90:0,18,135	0/0:22,0:21:30.73:0,31,207	0/0:22,0:21:39.66:0,40,316	0/0:22,0:21:32.90:0,33,212	1/1:23,0:22:34.49:246,34,0	0/0:18,0:18:30.10:0,30,214	1/1:7,9:15:25.49:209,25,0	1/1:13,2:15:17.41:132,17,0	0/0:20,0:19:38.08:0,38,310	0/0:10,0:9:23.91:0,24,206	0/0:19,0:18:24.35:0,24,189	0/0:18,0:17:33.28:0,33,244	0/0:21,0:21:29.11:0,29,302	1/1:11,6:17:30.56:227,31,0	0/0:22,0:22:42.59:0,43,290	0/1:14,0:13:2.75:3,0,132	0/0:19,0:18:32.57:0,33,259	1/1:13,0:13:24.34:179,24,0	0/0:13,0:13:33.78:0,34,277	0/0:18,0:18:35.78:0,36,267	0/0:30,0:28:46.92:0,47,389	0/0:11,0:11:25.83:0,26,218	1/1:15,0:15:28.07:201,28,0	0/0:34,0:32:42.61:0,43,329	1/1:3,0:2:5.71:31,6,0
chr10	87416196	.	GGC	G	714.74	PASS	AB=1.000;AC=17;AF=0.327;AN=52;BaseQRankSum=-0.423;DP=206;FS=3.581;HRun=0;HaplotypeScore=112.7603;InbreedingCoeff=0.4567;MQ=71.39;MQ0=0;MQRankSum=-1.514;QD=10.51;ReadPosRankSum=-0.473;VQSLOD=3.2890;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:3.74:25,4,0	./.	0/0:19,1:9:11.11:0,11,115	0/0:19,0:8:5.61:0,6,69	0/0:9,0:9:11.78:0,12,61	1/1:2,7:9:9.96:127,10,0	1/1:1,12:13:23.95:316,24,0	1/1:3,0:2:5.46:29,5,0	0/0:10,0:10:11.98:0,12,103	0/0:2,0:2:5.96:0,6,46	1/1:3,0:2:1.72:4,2,0	0/0:11,0:11:4.45:0,4,57	0/0:6,0:6:12:0,12,108	0/0:6,0:5:5.66:0,6,39	0/0:9,0:9:2.52:0,3,23	0/0:7,0:7:7.67:0,8,59	0/0:15,0:14:3.60:0,4,125	1/1:2,6:8:7.27:89,7,0	0/1:5,0:5:10.72:11,0,17	0/0:4,0:4:2.37:0,2,8	0/0:4,0:4:5.27:0,5,39	1/1:0,7:7:18.06:257,18,0	./.	0/1:8,0:8:9.87:10,0,64	0/0:4,0:4:0.64:0,1,7	0/0:3,0:3:4.54:0,5,41	0/0:7,0:7:9:0,9,79	0/1:1,0:1:0:0,0,0
chr10	87416197	.	GC	G	512.31	PASS	AB=0.949;AC=31;AF=0.574;AN=54;BaseQRankSum=0.074;DP=194;FS=3.063;HRun=1;HaplotypeScore=110.5050;InbreedingCoeff=0.3384;MQ=70.63;MQ0=0;MQRankSum=-2.628;QD=4.17;ReadPosRankSum=-0.596;VQSLOD=0.1214;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:11:10.54:94,11,0	./.	0/1:16,1:7:11.53:12,0,86	0/0:15,0:8:4.19:0,4,42	0/0:9,0:9:0.78:0,1,11	1/1:9,0:9:11.35:59,11,0	1/1:13,0:13:21.37:123,21,0	1/1:2,1:2:5.98:62,6,0	0/0:9,0:9:3.23:0,3,30	0/0:2,0:2:2.53:0,3,12	1/1:3,0:2:2.29:6,2,0	1/1:10,1:11:2.97:46,3,0	0/0:6,0:6:11.04:0,11,50	1/1:6,0:5:7.01:36,7,0	1/1:9,0:9:1.67:9,2,0	0/1:7,0:7:12.58:13,0,14	0/0:15,0:14:5.15:0,5,30	1/1:7,0:7:5.87:35,6,0	0/1:3,1:4:3.42:31,0,3	1/1:4,0:4:1.82:5,2,0	0/0:3,0:3:6.82:0,7,23	1/1:7,0:7:17.62:111,18,0	0/1:1,0:1:0:0,0,0	0/1:6,0:6:8.46:15,0,8	1/1:4,0:4:2.52:8,3,0	0/0:3,0:3:2.03:0,2,12	0/0:7,0:7:7.76:0,8,36	1/1:1,0:1:0.47:1,0,0
chr10	87416223	.	G	GT	1055.53	PASS	AB=0.500;AC=39;AF=0.848;AN=46;BaseQRankSum=2.167;DP=74;FS=0.000;HRun=1;HaplotypeScore=105.1079;InbreedingCoeff=0.3592;MQ=65.38;MQ0=0;MQRankSum=-0.830;QD=15.52;ReadPosRankSum=2.167;VQSLOD=3.6618;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:5.60:39,6,0	./.	0/0:3,0:2:3:0,3,27	0/0:2,0:2:0:0,0,0	1/1:0,8:8:14.75:72,15,0	1/1:0,4:4:8.04:50,8,0	1/1:0,5:5:13.57:116,14,0	./.	1/1:0,4:4:12.01:112,12,0	./.	1/1:0,1:1:1.55:4,2,0	1/1:0,4:4:10.11:58,10,0	1/1:0,3:3:9.01:82,9,0	1/1:0,1:1:2.99:24,3,0	1/1:0,7:7:13.58:76,14,0	1/1:0,4:4:8.29:61,8,0	1/1:0,7:7:16.20:130,16,0	0/1:0,1:1:0:0,0,0	1/1:0,2:2:3:28,3,0	1/1:0,1:1:3:28,3,0	0/0:0,1:1:1.25:0,1,3	1/1:0,5:5:15.01:136,15,0	./.	./.	1/1:0,3:3:4.13:31,4,0	1/1:0,2:2:3.01:30,3,0	1/1:0,3:3:8.86:66,9,0	1/1:0,1:1:1.55:4,2,0
chr10	87416231	.	CA	C	1380.07	PASS	AB=0.750;AC=40;AF=0.870;AN=46;BaseQRankSum=3.873;DP=74;FS=8.862;HRun=1;HaplotypeScore=104.0783;InbreedingCoeff=0.2799;MQ=71.72;MQ0=0;MQRankSum=-1.583;QD=19.44;ReadPosRankSum=3.040;VQSLOD=3.3809;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:5.95:53,6,0	./.	0/0:2,0:2:3.01:0,3,39	0/1:3,0:3:2.08:2,0,13	0/1:0,8:8:3.04:32,0,3	1/1:0,4:4:11.11:79,11,0	1/1:0,5:5:14.41:150,14,0	./.	1/1:0,4:4:12.04:142,12,0	./.	1/1:0,1:1:2.60:10,3,0	1/1:0,4:4:10.95:82,11,0	1/1:0,3:3:9.03:102,9,0	1/1:0,1:1:3.01:30,3,0	1/1:0,7:7:14.69:108,15,0	1/1:0,4:4:10.07:83,10,0	1/1:0,7:7:16.60:172,17,0	1/1:0,1:1:0.47:1,0,0	1/1:0,2:2:3.48:39,3,0	1/1:0,1:1:3.01:35,3,0	0/0:0,1:1:0.89:0,1,2	1/1:0,5:5:15.04:172,15,0	./.	./.	1/1:0,3:3:5.50:44,6,0	1/1:0,2:2:3.90:40,4,0	1/1:0,3:3:9:98,9,0	1/1:0,1:1:2.37:8,2,0
chr10	87416234	.	TC	T	1376.91	PASS	AB=0.500;AC=39;AF=0.848;AN=46;BaseQRankSum=4.167;DP=74;FS=22.480;HRun=1;HaplotypeScore=104.0863;InbreedingCoeff=0.3619;MQ=71.72;MQ0=0;MQRankSum=-1.228;QD=20.25;ReadPosRankSum=3.123;VQSLOD=2.5919;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:5.95:53,6,0	./.	0/0:2,0:2:3:0,3,25	0/0:3,0:3:6.02:0,6,89	0/1:0,8:8:2.31:33,0,2	1/1:0,4:4:11.11:79,11,0	1/1:0,5:5:14.41:150,14,0	./.	1/1:0,4:4:12.04:142,12,0	./.	1/1:0,1:1:2.60:10,3,0	1/1:0,4:4:10.95:82,11,0	1/1:0,3:3:9.03:103,9,0	1/1:0,1:1:3.01:31,3,0	1/1:0,7:7:14.69:108,15,0	1/1:0,4:4:10.07:83,10,0	1/1:0,7:7:16.75:172,17,0	1/1:0,1:1:0.47:1,0,0	1/1:0,2:2:3.48:39,3,0	1/1:0,1:1:3.01:35,3,0	0/0:0,1:1:0.89:0,1,2	1/1:0,5:5:15.04:173,15,0	./.	./.	1/1:0,3:3:5.50:45,6,0	1/1:0,2:2:3.90:40,4,0	1/1:0,3:3:9:98,9,0	1/1:0,1:1:2.50:9,2,0
chr10	87416242	.	TG	T	1337.87	PASS	AB=0.500;AC=38;AF=0.826;AN=46;BaseQRankSum=4.254;DP=73;FS=22.333;HRun=1;HaplotypeScore=104.2596;InbreedingCoeff=0.3548;MQ=65.80;MQ0=0;MQRankSum=-2.309;QD=19.67;ReadPosRankSum=1.071;VQSLOD=2.5375;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:5.95:54,6,0	./.	0/0:1,0:1:3.01:0,3,47	0/0:3,0:3:6.02:0,6,90	0/1:0,8:8:2.36:32,0,2	1/1:0,4:4:11.12:81,11,0	1/1:0,5:5:14.41:152,14,0	./.	1/1:0,4:4:9.91:110,10,0	./.	1/1:0,1:1:2.60:10,3,0	1/1:0,4:4:11.30:83,11,0	1/1:0,3:3:9.03:107,9,0	1/1:0,1:1:3.01:36,3,0	1/1:0,7:7:14.82:113,15,0	1/1:0,4:4:10.07:85,10,0	1/1:0,7:7:14.99:141,15,0	0/1:0,1:1:0:0,0,0	1/1:0,2:2:3.48:37,3,0	1/1:0,1:1:3.01:36,3,0	0/0:0,1:1:0.89:0,1,2	1/1:0,5:5:15.05:179,15,0	./.	./.	1/1:0,3:3:5.50:46,6,0	1/1:0,2:2:3.90:39,4,0	1/1:0,3:3:9.01:96,9,0	1/1:0,1:1:2.50:9,2,0
chr10	87416245	.	TC	T	1261.67	PASS	AB=0.500;AC=37;AF=0.804;AN=46;BaseQRankSum=4.370;DP=73;FS=20.422;HRun=1;HaplotypeScore=104.5713;InbreedingCoeff=0.4013;MQ=65.80;MQ0=0;MQRankSum=-2.504;QD=21.03;ReadPosRankSum=0.795;VQSLOD=2.5089;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:5.95:54,6,0	./.	0/0:1,0:1:3.01:0,3,32	0/0:3,0:3:6.02:0,6,92	0/0:0,8:8:0.19:0,0,6	1/1:0,4:4:11.12:81,11,0	1/1:0,5:5:14.41:152,14,0	./.	1/1:0,4:4:6.73:104,7,0	./.	1/1:0,1:1:2.60:10,3,0	1/1:0,4:4:11.30:83,11,0	1/1:0,3:3:9.03:107,9,0	1/1:0,1:1:3.01:36,3,0	1/1:0,7:7:14.82:113,15,0	1/1:0,4:4:10.07:85,10,0	1/1:0,7:7:10.71:103,11,0	0/1:0,1:1:0:0,0,0	1/1:0,2:2:3.48:37,3,0	1/1:0,1:1:3.01:36,3,0	0/0:0,1:1:0.89:0,1,2	1/1:0,5:5:15.05:179,15,0	./.	./.	1/1:0,3:3:5.50:46,6,0	1/1:0,2:2:3.90:39,4,0	1/1:0,3:3:9.01:96,9,0	1/1:0,1:1:2.50:9,2,0
chr10	87417642	.	TGAGCAC	T	3853.78	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.222;DP=735;FS=1.084;HRun=0;HaplotypeScore=152.1851;InbreedingCoeff=0.9986;MQ=79.58;MQ0=0;MQRankSum=-11.152;QD=52.79;ReadPosRankSum=-0.249;VQSLOD=3.8161;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,151,5046	1/1:0,13:13:39.13:933,39,0	0/0:23,0:23:63.22:0,63,2105	0/0:25,0:25:69.24:0,69,2301	0/0:17,0:17:51.18:0,51,1838	0/0:23,0:22:69.24:0,69,2481	0/0:31,0:31:93.32:0,93,3191	0/0:21,0:21:54.18:0,54,1839	0/0:28,0:28:84.29:0,84,2908	1/1:0,20:20:60.21:1389,60,0	1/1:0,19:19:39.09:884,39,0	0/0:26,0:26:78.27:0,78,2811	0/0:18,0:18:54.17:0,54,1860	0/0:24,0:24:69.22:0,69,2403	0/0:35,0:35:99:0,99,3466	0/0:27,0:27:81.28:0,81,2844	1/1:5,16:21:27.09:648,27,0	0/0:26,0:26:75.26:0,75,2704	0/0:29,0:29:87.30:0,87,2823	0/0:19,0:19:57.20:0,57,2015	0/0:88,0:88:99:0,265,9372	0/0:20,0:20:60.19:0,60,2037	0/0:23,0:23:69.24:0,69,2396	0/0:25,0:25:75.21:0,75,2518	0/0:17,0:17:51.18:0,51,1802	0/0:31,1:32:24.23:0,24,3205	0/0:27,0:27:72.25:0,72,2509	0/0:8,0:8:24.08:0,24,865
chr10	87418319	.	AAAG	A	2445.85	PASS	AB=0.939;AC=9;AF=0.161;AN=56;BaseQRankSum=10.323;DP=695;FS=6.508;HRun=0;HaplotypeScore=114.0569;InbreedingCoeff=0.8765;MQ=77.74;MQ0=0;MQRankSum=-1.061;QD=22.03;ReadPosRankSum=1.093;VQSLOD=3.4201;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,126,2632	1/1:0,11:11:30.06:433,30,0	0/0:32,0:32:73.49:0,73,1330	0/0:22,0:19:38.34:0,38,540	0/0:28,0:28:72.25:0,72,1478	0/0:25,0:25:66.23:0,66,1380	0/0:24,0:24:63.20:0,63,1296	0/0:29,0:29:75.23:0,75,1483	0/0:19,0:19:54.19:0,54,1145	1/1:6,22:28:63.16:915,63,0	1/1:2,11:13:20.99:270,21,0	0/0:18,0:18:48.15:0,48,979	0/0:23,0:23:51.16:0,51,1042	0/0:23,0:23:60.18:0,60,1225	0/0:36,0:36:99:0,99,2099	0/0:25,0:25:72.23:0,72,1489	1/1:4,24:28:66.15:982,66,0	0/0:21,0:21:57.17:0,57,1163	0/0:20,0:20:51.16:0,51,1016	0/0:20,0:20:57.18:0,57,1161	0/0:26,0:26:66.21:0,66,1339	0/0:22,0:22:60.19:0,60,1204	0/0:23,0:23:63.20:0,63,1260	0/0:28,0:28:72.23:0,72,1470	0/0:27,0:27:78.25:0,78,1615	0/1:29,2:31:10.33:10,0,1461	0/0:35,0:34:84.29:0,84,1760	0/0:12,0:12:33.11:0,33,690
chr10	87419346	.	TTG	T	1922.13	PASS	AB=0.846;AC=33;AF=0.717;AN=46;BaseQRankSum=6.160;DP=658;FS=0.917;HRun=0;HaplotypeScore=98.3613;InbreedingCoeff=0.2631;MQ=59.88;MQ0=16;MQRankSum=-1.107;QD=4.34;ReadPosRankSum=2.842;VQSLOD=2.6027;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:33,10:46:4.99:226,5,0	1/1:2,0:5:5.64:27,6,0	./.	./.	1/1:9,0:9:3.01:33,3,0	0/1:21,0:21:99:107,0,130	0/1:26,1:27:25.83:26,0,182	0/0:35,0:32:3.01:0,3,35	1/1:18,4:22:12.03:131,12,0	1/1:15,0:20:11.36:56,11,0	./.	1/1:21,6:27:9.02:98,9,0	1/1:19,1:20:11.86:112,12,0	1/1:15,6:21:18.05:196,18,0	1/1:32,7:40:23.88:243,24,0	0/1:14,10:24:17.72:186,0,18	1/1:20,0:27:11.36:56,11,0	0/0:21,0:21:18.53:0,19,270	./.	1/1:14,4:17:6.02:65,6,0	1/1:27,0:29:8.26:37,8,0	0/0:18,0:18:12.02:0,12,141	0/0:15,0:14:12.04:0,12,179	0/1:28,11:39:56.26:232,0,56	1/1:8,2:12:8.69:61,9,0	./.	0/1:20,5:24:23.84:157,0,24	1/1:4,0:7:5.68:28,6,0
chr10	87419556	.	T	TCCCAG	11114.92	PASS	AB=0.857;AC=54;AF=0.964;AN=56;BaseQRankSum=-8.661;DP=376;FS=27.762;HRun=0;HaplotypeScore=535.8188;InbreedingCoeff=-0.0688;MQ=44.63;MQ0=0;MQRankSum=2.094;QD=29.56;ReadPosRankSum=-6.519;VQSLOD=3.5107;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:19:32.68:604,33,0	1/1:9,0:9:8.68:218,9,0	1/1:1,0:2:3.01:71,3,0	0/1:3,1:5:7.98:161,0,8	1/1:12,0:12:18.06:420,18,0	1/1:14,0:14:3.99:252,4,0	1/1:14,0:14:37.51:679,38,0	1/1:16,0:15:24.51:432,25,0	1/1:11,0:11:11.34:423,11,0	1/1:24,0:24:23.07:704,23,0	1/1:9,0:9:13.52:243,14,0	1/1:17,0:17:18.34:503,18,0	1/1:13,0:12:28.28:544,28,0	1/1:12,0:12:2.44:146,2,0	1/1:23,0:23:29.42:651,29,0	1/1:13,0:13:10.86:332,11,0	1/1:10,0:10:3.62:189,4,0	1/1:6,0:6:15.87:211,16,0	1/1:9,0:9:13.16:328,13,0	1/1:15,0:15:20.96:496,21,0	1/1:7,0:7:12.65:200,13,0	0/1:14,0:14:9.46:119,0,9	1/1:20,0:20:32.76:789,33,0	1/1:11,0:11:23.55:421,24,0	1/1:23,0:24:14.15:619,14,0	1/1:15,0:15:33.62:534,34,0	1/1:18,0:18:16.50:492,16,0	1/1:13,0:13:17.58:335,18,0
chr10	87421883	.	C	CAG	2118.51	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-8.426;DP=644;FS=4.318;HRun=0;HaplotypeScore=88.9156;InbreedingCoeff=0.7308;MQ=57.06;MQ0=20;MQRankSum=-2.359;QD=16.81;ReadPosRankSum=-1.519;VQSLOD=3.0290;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:84.06:0,84,930	0/0:1,0:5:2.80:0,3,14	0/0:23,0:8:5.79:0,6,58	0/0:44,0:13:3.06:0,3,62	0/0:21,0:20:45.14:0,45,539	0/0:15,0:15:26.86:0,27,294	0/0:19,0:19:48.07:0,48,541	1/1:15,13:26:42.09:604,42,0	0/0:20,0:21:47.93:0,48,521	0/0:8,0:27:32.52:0,33,164	0/0:1,0:14:2.70:0,3,14	0/0:23,0:23:60.18:0,60,718	0/0:10,0:11:29.92:0,30,335	0/0:23,0:26:56.97:0,57,627	0/0:26,0:26:63.18:0,63,744	0/0:29,0:30:68.53:0,69,748	0/1:4,0:23:5.30:5,0,44	0/0:18,0:18:39.10:0,39,451	0/0:17,0:16:27.08:0,27,324	0/0:21,0:20:50.90:0,51,543	1/1:13,25:35:36.12:576,36,0	0/0:10,0:10:24.07:0,24,287	0/0:18,0:18:30.05:0,30,341	0/0:42,0:42:93.26:0,93,1101	0/0:22,0:22:51.16:0,51,611	1/1:6,13:18:6.20:526,6,0	0/0:25,0:25:63.19:0,63,754	1/1:2,14:16:25.42:562,25,0
chr10	87423236	.	G	GGC	798.96	PASS	AB=0.775;AC=9;AF=0.161;AN=56;BaseQRankSum=3.567;DP=414;FS=1.926;HRun=0;HaplotypeScore=66.3977;InbreedingCoeff=0.6952;MQ=80.57;MQ0=16;MQRankSum=0.066;QD=9.99;ReadPosRankSum=-0.842;VQSLOD=3.0722;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:52.83:381,53,0	0/0:6,0:6:7.40:0,7,76	0/0:19,0:12:20.02:0,20,213	0/0:55,0:34:0.94:0,1,302	0/0:8,0:7:13.29:0,13,91	1/1:15,1:16:35.84:310,36,0	1/1:4,14:20:6.02:107,6,0	0/0:18,0:17:46.16:0,46,399	0/0:12,0:12:7.76:0,8,197	0/0:16,0:16:21.40:0,21,322	0/0:11,0:11:19.64:0,20,201	0/0:10,0:9:23.98:0,24,228	0/0:14,0:14:37.95:0,38,269	0/0:13,0:12:35.96:0,36,341	0/0:12,0:11:26.98:0,27,240	0/0:7,0:6:11.99:0,12,103	0/0:15,0:15:32.72:0,33,285	0/1:6,2:8:1.38:140,0,1	0/0:15,0:14:28.74:0,29,236	0/0:9,0:9:20.63:0,21,162	0/0:25,0:23:42.78:0,43,361	0/1:1,9:10:0:0,0,0	0/1:4,0:3:0.56:1,0,4	0/0:18,0:18:18.86:0,19,299	0/0:8,0:8:23.91:0,24,216	0/0:17,0:17:39.46:0,39,361	0/0:7,0:7:16.78:0,17,124	0/0:19,0:17:29.92:0,30,256
chr10	87423239	.	GCT	G	81.31	PASS	AB=0.970;AC=13;AF=0.271;AN=48;BaseQRankSum=3.124;DP=446;FS=4.980;HRun=0;HaplotypeScore=67.4374;InbreedingCoeff=-0.0887;MQ=75.71;MQ0=25;MQRankSum=-0.652;QD=0.51;ReadPosRankSum=-0.544;VQSLOD=0.7492;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,2:24:27.69:32,0,28	0/1:6,0:6:2.19:2,0,7	./.	./.	0/1:8,0:7:19.95:20,0,27	0/0:16,0:16:2.89:0,3,29	0/0:23,0:21:4.36:0,4,32	0/0:20,0:19:3.38:0,3,8	0/0:9,0:13:9:0,9,94	0/1:18,0:17:31.53:39,0,32	0/1:12,0:12:4.15:4,0,8	0/1:15,2:15:21.35:21,0,150	./.	0/0:14,0:12:12.03:0,12,158	0/0:15,0:14:6:0,6,68	1/1:7,0:6:0.47:1,0,0	0/0:13,0:13:6:0,6,63	0/0:8,0:8:11.82:0,12,109	1/1:16,0:17:2.48:31,2,0	0/1:9,0:9:7.09:38,0,7	0/0:25,1:24:5.12:0,5,88	0/0:11,0:11:0:0,0,1	0/0:5,1:5:3.01:0,3,30	0/1:24,0:22:2.08:2,0,142	0/0:11,0:11:8.39:0,8,86	0/1:16,0:16:7.55:8,0,21	./.	0/0:13,1:10:2.01:0,2,22
chr10	87423281	.	TCTCTCC	T	953.39	PASS	AB=0.946;AC=15;AF=0.278;AN=54;BaseQRankSum=1.127;DP=396;FS=4.327;HRun=0;HaplotypeScore=78.8719;InbreedingCoeff=0.3614;MQ=48.10;MQ0=45;MQRankSum=-0.190;QD=6.49;ReadPosRankSum=1.635;VQSLOD=0.8326;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:22:43.65:0,44,421	1/1:6,0:6:14.87:111,15,0	./.	0/0:6,0:1:3.01:0,3,32	0/1:9,0:7:16.95:17,0,50	0/0:17,0:16:29.56:0,30,282	0/0:30,0:26:29.45:0,29,375	1/1:17,0:13:12.48:128,12,0	0/0:15,0:15:32.99:0,33,427	0/1:7,11:17:4.20:254,0,4	1/1:4,0:4:2.41:25,2,0	0/0:16,0:15:34.76:0,35,696	0/0:13,0:13:17.19:0,17,147	0/0:17,0:16:33.69:0,34,433	0/0:12,0:12:27.48:0,27,371	0/0:19,0:13:18.27:0,18,155	1/1:15,0:13:7.74:181,8,0	0/0:12,0:12:30.49:0,30,457	0/1:18,0:11:11.07:11,0,89	0/1:11,0:8:7.15:7,0,58	0/1:23,0:22:20.88:169,0,21	0/0:9,0:9:11.45:0,11,107	0/0:13,0:11:15.01:0,15,186	0/0:24,0:21:38.01:0,38,532	0/0:10,0:10:17.34:0,17,182	0/1:14,0:13:0.56:181,0,1	0/0:11,0:9:21.02:0,21,267	0/1:12,0:4:13.45:34,0,13
chr10	87423866	.	TCACACACACACACACA	T	55.35	PASS	AB=1.000;AC=3;AF=0.060;AN=50;BaseQRankSum=3.082;DP=611;FS=0.000;HRun=0;HaplotypeScore=216.6088;InbreedingCoeff=0.3824;MQ=50.06;MQ0=47;MQRankSum=-2.231;QD=1.73;ReadPosRankSum=-0.004;VQSLOD=2.5027;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:34:41.48:0,41,1140	1/1:10,1:10:3.01:93,3,0	./.	./.	0/0:19,0:15:18.06:0,18,606	0/0:21,0:20:11.96:0,12,295	0/0:23,0:22:7.17:0,7,134	0/0:22,0:21:6.02:0,6,108	0/0:20,0:20:18.06:0,18,661	0/1:21,0:20:4.12:53,0,4	./.	0/0:20,0:19:21.07:0,21,630	0/0:21,0:21:33.07:0,33,971	0/0:30,0:30:18.06:0,18,616	0/0:25,0:23:21.07:0,21,1069	0/0:21,0:18:19.88:0,20,978	0/0:27,6:29:8.28:0,8,40	0/0:22,0:19:31.80:0,32,862	0/0:13,0:13:15.94:0,16,736	0/0:11,0:11:6.02:0,6,300	0/0:29,0:23:18.01:0,18,608	0/0:24,0:24:15.05:0,15,536	0/0:18,0:16:18.06:0,18,516	0/0:46,0:43:60.17:0,60,2316	0/0:18,0:16:21.05:0,21,696	0/0:22,0:20:21.07:0,21,547	0/0:11,0:8:15.05:0,15,704	0/0:11,0:15:1.08:0,1,250
chr10	87424401	.	G	GA	2357.67	PASS	AB=0.571;AC=7;AF=0.125;AN=56;BaseQRankSum=-8.387;DP=706;FS=0.433;HRun=9;HaplotypeScore=68.4100;InbreedingCoeff=0.8610;MQ=74.15;MQ0=0;MQRankSum=-0.281;QD=24.56;ReadPosRankSum=1.557;VQSLOD=4.4307;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,102,885	0/1:2,6:8:8.01:145,0,8	0/0:31,0:25:42.57:0,43,350	0/0:17,0:16:26.40:0,26,212	0/0:31,0:31:77.96:0,78,676	0/0:26,0:26:65.93:0,66,564	0/0:21,0:21:56.86:0,57,480	0/0:33,0:33:57.95:0,58,641	0/0:21,0:21:56.96:0,57,490	1/1:6,29:35:81.01:967,81,0	1/1:4,13:17:45.11:486,45,0	0/0:24,0:24:65.47:0,65,556	0/0:17,0:17:47.78:0,48,400	0/0:25,0:25:65.95:0,66,570	0/0:30,0:30:53.78:0,54,691	0/0:29,0:29:77.97:0,78,677	1/1:3,32:36:84.06:908,84,0	0/0:26,0:25:68.95:0,69,593	0/0:18,0:18:41.96:0,42,362	0/0:19,0:19:42.46:0,42,366	0/0:20,0:20:53.94:0,54,459	0/0:19,0:19:50.95:0,51,435	0/0:17,0:17:44.96:0,45,385	0/0:23,0:23:62.98:0,63,546	0/0:28,0:28:74.98:0,75,651	0/0:34,0:34:86.96:0,87,752	0/0:38,0:39:95.51:0,96,837	0/0:20,0:20:59.99:0,60,520
chr10	87425981	.	G	GT	367.25	PASS	AB=0.844;AC=13;AF=0.260;AN=50;BaseQRankSum=-1.099;DP=195;FS=1.910;HRun=0;HaplotypeScore=31.9070;InbreedingCoeff=0.4833;MQ=79.51;MQ0=0;MQRankSum=-0.206;QD=5.10;ReadPosRankSum=-0.052;VQSLOD=2.9547;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:29.85:0,30,243	1/1:4,0:4:5.88:36,6,0	0/1:12,0:8:3.25:3,0,67	0/0:11,0:9:18.94:0,19,127	./.	0/0:6,0:6:10.17:0,10,62	0/0:19,0:19:56.42:0,56,451	1/1:12,0:13:23.92:205,24,0	0/0:9,0:9:20.89:0,21,168	1/1:1,0:1:3:28,3,0	1/1:4,0:4:2.96:20,3,0	0/0:9,0:9:20.96:0,21,175	0/0:4,0:4:8.94:0,9,67	0/0:3,0:3:8.90:0,9,69	0/0:3,0:3:8.93:0,9,68	0/0:2,0:2:6:0,6,61	0/1:8,0:7:14.28:63,0,14	0/0:12,0:12:27.75:0,28,229	0/0:4,0:4:9.01:0,9,83	0/0:3,0:3:6.01:0,6,66	0/1:3,19:24:25.54:57,0,26	./.	0/0:2,0:2:6:0,6,53	0/0:9,0:9:17.98:0,18,167	0/0:5,0:5:11.88:0,12,87	1/1:2,4:6:9.01:106,9,0	0/0:4,0:4:8.98:0,9,73	./.
chr10	87426139	.	ACCGGATCGCGGG	A	2947.17	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.727;DP=487;FS=10.297;HRun=0;HaplotypeScore=167.8946;InbreedingCoeff=0.9520;MQ=89.73;MQ0=1;MQRankSum=-6.894;QD=54.58;ReadPosRankSum=0.331;VQSLOD=2.9522;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.30:0,90,4915	1/1:2,5:7:5.53:231,6,0	0/0:15,0:15:32.28:0,32,1529	0/0:27,0:27:72.24:0,72,3051	0/0:7,0:7:18.06:0,18,1124	0/0:13,0:13:30.10:0,30,1836	0/0:29,0:29:87.24:0,87,4771	0/0:14,0:14:39.08:0,39,1772	0/0:15,0:15:45.15:0,45,2660	1/1:2,17:19:48.07:1369,48,0	1/1:0,8:8:11.87:252,12,0	0/0:22,0:22:66.23:0,66,3962	0/0:9,0:9:24.06:0,24,1208	0/0:18,0:18:54.19:0,54,3263	0/0:13,0:13:39.12:0,39,2123	0/0:7,0:7:21.07:0,21,1304	1/1:3,17:19:33.11:1246,33,0	0/0:34,0:34:99:0,102,6070	0/0:22,0:22:66.22:0,66,3634	0/0:15,0:15:42.14:0,42,2354	0/0:40,0:40:99:0,117,7008	0/0:9,0:9:24.08:0,24,1448	0/0:7,0:7:21.07:0,21,1065	0/0:22,0:22:63.22:0,63,3642	0/0:19,0:19:51.18:0,51,2401	0/0:16,0:16:48.16:0,48,2849	0/0:15,0:15:42.11:0,42,2232	0/0:15,0:15:45.15:0,45,2631
chr10	87434262	.	GGT	G	45.54	PASS	AB=0.892;AC=11;AF=0.229;AN=48;BaseQRankSum=2.164;DP=339;FS=13.731;HRun=0;HaplotypeScore=28.7892;InbreedingCoeff=0.0711;MQ=71.59;MQ0=63;MQRankSum=-0.151;QD=0.46;ReadPosRankSum=4.643;VQSLOD=-0.2940;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:13:8.86:0,9,59	./.	0/0:26,0:17:22.34:0,22,258	0/1:17,0:10:0.46:0,0,98	./.	0/0:14,1:11:2.94:0,3,18	1/1:11,5:7:3.01:33,3,0	1/1:5,0:1:2.04:6,2,0	0/0:13,1:11:2.76:0,3,18	0/0:13,1:8:15.30:0,15,146	0/0:6,1:5:2.94:0,3,18	0/0:7,0:7:2.92:0,3,17	0/0:17,0:14:3:0,3,25	0/0:8,0:7:2.94:0,3,18	0/0:10,1:10:5.77:0,6,39	0/0:4,0:2:2.97:0,3,20	0/1:16,5:16:27.84:52,0,28	1/1:6,5:7:3.46:24,3,0	0/1:8,1:6:15.26:35,0,15	0/1:8,4:12:3.08:3,0,14	0/0:15,5:14:8.98:0,9,72	./.	./.	0/0:13,2:9:5.90:0,6,38	0/0:10,0:6:2.96:0,3,19	0/1:9,0:6:5.06:5,0,102	0/0:13,2:11:8.89:0,9,62	0/0:7,2:8:2.98:0,3,22
chr10	87434590	.	T	TGC	203.65	PASS	AB=0.971;AC=18;AF=0.563;AN=32;BaseQRankSum=0.026;DP=321;FS=5.798;HRun=0;HaplotypeScore=37.3923;InbreedingCoeff=0.3284;MQ=27.70;MQ0=186;MQRankSum=0.489;QD=1.22;ReadPosRankSum=-1.414;VQSLOD=-0.1717;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:11:0.03:0,0,0	./.	./.	0/0:6,0:2:3:0,3,26	./.	./.	./.	0/1:9,0:5:6.17:56,0,6	0/0:13,0:5:9.03:0,9,110	1/1:10,0:4:5.69:30,6,0	./.	0/0:12,0:10:6.02:0,6,74	./.	0/0:10,0:4:3.01:0,3,35	1/1:14,0:9:3:26,3,0	./.	1/1:27,0:15:8.94:44,9,0	1/1:6,4:5:3.01:51,3,0	0/1:9,0:4:0.17:27,0,0	./.	0/0:16,0:4:0:0,0,0	0/1:13,2:4:0:0,0,0	./.	1/1:18,7:10:3.01:36,3,0	./.	1/1:15,0:4:4.76:23,5,0	1/1:8,0:4:2.90:16,3,0	./.
chr10	87435014	.	CTG	C	178.22	PASS	AC=6;AF=0.333;AN=18;BaseQRankSum=0.765;DP=323;FS=0.000;HRun=0;HaplotypeScore=20.3670;MQ=13.01;MQ0=274;MQRankSum=-3.337;QD=4.57;ReadPosRankSum=-1.072;VQSLOD=1.2937;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:1:3.01:0,3,35	./.	./.	0/0:11,0:4:2.99:0,3,23	1/1:2,8:1:2.97:20,3,0	./.	./.	./.	0/0:14,0:2:6.02:0,6,110	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/0:15,0:8:18.06:0,18,309	./.	1/1:1,14:9:5.98:63,6,0	1/1:2,12:9:15.01:191,15,0	./.	0/0:10,0:4:6.01:0,6,109	0/0:18,0:4:12.04:0,12,213	./.	./.
chr10	87436674	.	AAC	A	9487.82	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=10.890;DP=694;FS=1.967;HRun=0;HaplotypeScore=91.6329;InbreedingCoeff=0.9993;MQ=74.02;MQ0=5;MQRankSum=-1.029;QD=24.58;ReadPosRankSum=3.415;VQSLOD=5.6054;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:84.21:0,84,1265	1/1:3,14:17:42.09:497,42,0	0/0:52,0:36:58.86:0,59,708	0/0:59,0:40:54.79:0,55,893	0/0:22,0:22:48.16:0,48,764	1/1:5,13:18:30.09:367,30,0	1/1:5,14:19:27.07:317,27,0	1/1:7,13:20:39.12:476,39,0	0/0:11,0:11:30.10:0,30,476	1/1:3,24:27:75.22:904,75,0	1/1:5,18:24:53.92:604,54,0	0/0:16,0:16:45.15:0,45,708	0/0:22,0:22:51.17:0,51,824	0/0:13,0:13:33.11:0,33,533	0/0:22,1:23:63.21:0,63,991	0/0:24,1:25:32.57:0,33,1029	1/1:2,21:23:51.16:623,51,0	1/1:2,16:18:30.01:366,30,0	1/1:2,9:11:27.08:328,27,0	1/1:5,18:23:39.12:477,39,0	1/1:5,30:35:69.22:843,69,0	1/1:2,18:20:54.13:643,54,0	1/1:0,15:15:36.01:440,36,0	1/1:6,24:31:57.18:697,57,0	0/0:22,0:22:51.17:0,51,805	1/1:8,18:26:54.17:659,54,0	1/1:11,30:41:65.76:806,66,0	1/1:6,12:18:36.11:440,36,0
chr10	87437173	.	TCACA	T	5346.97	PASS	AB=0.945;AC=9;AF=0.161;AN=56;BaseQRankSum=14.603;DP=1266;FS=3.860;HRun=0;HaplotypeScore=271.8842;InbreedingCoeff=0.8676;MQ=61.81;MQ0=0;MQRankSum=-4.583;QD=32.02;ReadPosRankSum=2.280;VQSLOD=4.7472;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,3333	1/1:0,9:9:27.01:464,27,0	0/0:45,0:42:99:0,101,2555	0/0:43,0:40:99:0,104,2448	0/0:44,0:44:99:0,126,3151	0/0:20,0:20:45.15:0,45,1169	0/0:36,0:36:81.28:0,81,2083	0/0:53,0:53:99:0,141,3443	0/0:55,0:55:99:0,149,3818	1/1:6,49:55:99:2909,157,0	1/1:0,22:22:39.13:726,39,0	0/0:64,0:64:99:0,184,4638	0/0:51,0:51:99:0,138,3446	0/0:51,0:51:99:0,151,3891	0/0:68,0:68:99:0,199,5055	0/0:65,0:65:99:0,166,4969	1/1:4,25:29:68.48:1221,68,0	0/0:28,0:28:68.70:0,69,1868	0/0:27,0:27:75.26:0,75,1923	0/0:42,0:42:99:0,111,2918	0/0:108,0:108:99:0,280,7176	0/0:43,0:43:99:0,123,3134	0/0:36,0:36:99:0,105,2676	0/0:65,0:67:99:0,175,4506	0/0:38,0:38:99:0,105,2394	0/1:49,3:52:26.26:26,0,3284	0/0:45,0:45:99:0,129,3388	0/0:23,0:23:69.24:0,69,1839
chr10	87437318	.	T	TCACACTCA	41025.65	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-5.530;DP=1273;FS=3.462;HRun=0;HaplotypeScore=361.5535;InbreedingCoeff=0.9998;MQ=56.15;MQ0=1;MQRankSum=-14.183;QD=61.79;ReadPosRankSum=-6.019;VQSLOD=2.6345;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,140,3671	1/1:13,5:19:45.01:1158,45,0	0/0:46,0:34:53.22:0,53,1005	0/0:51,0:43:48.53:0,49,919	0/0:40,0:40:99:0,102,2507	1/1:15,13:28:49.95:1650,50,0	1/1:37,13:50:72.20:2291,72,0	1/1:6,42:57:99:3496,153,0	0/0:62,0:62:99:0,162,3558	1/1:51,37:87:99:7188,220,0	1/1:10,11:21:48.07:1371,48,0	0/0:65,0:65:99:0,177,4016	0/0:63,0:63:99:0,174,3879	0/0:49,0:49:99:0,138,3242	0/0:71,0:71:99:0,199,4430	0/0:70,0:70:99:0,202,4933	1/1:19,3:22:35.75:540,36,0	1/1:12,5:17:26.99:891,27,0	1/1:3,30:34:93.17:2391,93,0	1/1:14,14:28:78.15:2148,78,0	1/1:56,16:72:61.89:2447,62,0	1/1:20,20:40:87.72:2779,88,0	1/1:13,15:29:64.38:1989,64,0	1/1:34,3:37:51.75:886,52,0	0/0:31,0:31:83.98:0,84,1657	1/1:30,37:67:99:5954,177,0	1/1:2,37:39:65.25:2612,65,0	1/1:5,8:13:36.07:1233,36,0
chr10	87437382	.	ACG	A	8793.99	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.276;DP=1427;FS=13.868;HRun=0;HaplotypeScore=265.0351;InbreedingCoeff=0.9985;MQ=58.09;MQ0=7;MQRankSum=1.824;QD=33.44;ReadPosRankSum=2.761;VQSLOD=2.9035;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:71,0:71:99:0,192,3305	0/0:16,0:16:18.68:0,19,725	0/0:49,1:30:58.83:0,59,1175	0/0:55,0:41:81.70:0,82,1361	0/0:30,0:30:87.23:0,87,1565	1/1:10,27:37:87.23:1281,87,0	1/1:3,44:47:98.31:1523,98,0	0/0:52,0:52:99:0,138,2471	0/0:62,0:62:99:0,184,3305	0/0:78,0:77:99:0,204,3828	0/0:31,0:31:84.13:0,84,1574	0/0:65,0:65:99:0,186,3211	0/0:49,0:49:99:0,141,2624	0/0:63,0:63:99:0,180,3220	0/0:92,0:92:99:0,273,4936	0/0:75,0:75:99:0,217,3949	0/0:26,0:26:65.89:0,66,1181	1/1:5,22:27:75.12:1048,75,0	0/0:36,0:36:99:0,102,1804	0/0:39,0:39:66.55:0,67,1788	0/0:110,0:111:99:0,190,4125	1/1:12,35:47:99:1482,103,0	1/1:3,39:42:96.14:1464,96,0	1/1:7,54:63:99:1995,132,0	0/0:41,0:41:99:0,111,1947	0/0:64,0:64:99:0,163,3210	0/0:38,0:37:84.19:0,84,1513	0/0:18,0:18:30.45:0,30,688
chr10	87437626	.	CACACTCACAT	C	5040.15	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.657;DP=1482;FS=23.152;HRun=0;HaplotypeScore=535.3527;InbreedingCoeff=0.9941;MQ=51.03;MQ0=21;MQRankSum=-12.205;QD=34.76;ReadPosRankSum=-5.125;VQSLOD=2.4901;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:72,0:72:99:0,99,4354	1/1:7,6:13:16.19:581,16,0	0/0:49,0:21:29.99:0,30,468	0/0:70,0:34:25.81:0,26,657	0/0:37,0:37:93.32:0,93,4020	0/0:30,0:30:61.74:0,62,2509	0/0:51,0:50:75.23:0,75,2768	0/0:52,0:50:84.29:0,84,2458	0/0:66,0:66:99:0,153,6183	1/1:50,24:71:97.25:3131,97,0	1/1:17,4:21:20.54:425,21,0	0/0:68,0:68:99:0,169,6825	0/0:50,0:50:99:0,111,3878	0/0:64,0:64:99:0,153,6526	0/0:79,0:79:99:0,193,7321	0/0:88,0:88:99:0,187,7929	1/1:32,5:36:61.09:903,61,0	0/0:30,0:30:52.85:0,53,2398	0/0:30,0:24:23.56:0,24,1642	0/0:37,0:37:44.53:0,45,2668	0/0:145,0:144:99:0,171,8701	0/0:53,0:53:91.71:0,92,4620	0/0:32,0:32:42.04:0,42,1641	0/0:69,0:69:39.91:0,40,3715	0/0:40,0:40:90.31:0,90,4045	0/0:65,0:64:99:0,149,6022	0/0:37,0:37:63.37:0,63,2779	0/0:23,0:23:45.12:0,45,1730
chr10	87437644	.	CAT	C	1716.59	PASS	AB=0.874;AC=6;AF=0.107;AN=56;BaseQRankSum=16.146;DP=1506;FS=49.297;HRun=0;HaplotypeScore=428.1596;InbreedingCoeff=0.2204;MQ=49.84;MQ0=22;MQRankSum=-14.028;QD=9.54;ReadPosRankSum=-4.820;VQSLOD=1.9262;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:68,1:69:20.71:0,21,2235	1/1:14,0:14:13.84:161,14,0	0/0:47,0:19:56.84:0,57,823	0/0:66,0:29:77.06:0,77,1065	0/0:36,0:36:99:0,108,2039	0/0:32,0:32:77.82:0,78,1493	0/0:50,0:49:86.05:0,86,1494	0/0:55,0:52:99:0,153,2883	0/0:68,0:68:99:0,199,3592	0/1:59,10:66:99:1022,0,510	0/1:15,4:19:42.86:143,0,43	0/0:67,0:67:99:0,199,3591	0/0:54,0:54:99:0,162,2971	0/0:60,0:60:99:0,175,3250	0/0:83,0:83:99:0,244,4543	0/0:67,0:67:99:0,196,3717	0/1:33,9:41:99:504,0,191	0/1:35,1:36:14.28:14,0,1412	0/0:28,0:24:3.92:0,4,949	0/0:39,0:39:68.51:0,69,1277	0/0:146,8:153:67.29:0,67,5232	0/0:60,0:60:99:0,109,2130	0/0:41,1:42:40.33:0,40,1030	0/0:75,5:80:80.45:0,80,2269	0/0:37,0:37:99:0,108,2013	0/0:70,1:70:99:0,113,3373	0/0:37,0:37:55.44:0,55,1383	0/0:23,0:23:15.45:0,15,849
chr10	87437691	.	A	ACACT	45479.65	PASS	AB=0.861;AC=35;AF=0.625;AN=56;BaseQRankSum=-2.914;DP=1552;FS=38.216;HRun=0;HaplotypeScore=461.7087;InbreedingCoeff=0.9237;MQ=49.47;MQ0=23;MQRankSum=-12.760;QD=44.15;ReadPosRankSum=-2.296;VQSLOD=2.6968;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:52,0:62:99:191,0,1687	1/1:5,9:18:43.65:884,44,0	0/0:44,0:22:39.65:0,40,574	0/0:51,0:20:38.81:0,39,505	0/0:27,0:27:81.23:0,81,1427	1/1:15,16:38:51.99:1719,52,0	1/1:10,39:61:96.26:2460,96,0	1/1:11,39:63:99:2828,173,0	0/0:47,0:47:99:0,129,2313	1/1:28,46:93:99:4702,264,0	1/1:10,8:27:57.09:990,57,0	0/0:61,0:61:99:0,168,2967	0/0:53,0:53:99:0,153,2725	0/0:59,0:59:99:0,162,2801	0/0:78,0:79:99:0,191,3971	0/0:65,0:65:99:0,184,3218	1/1:19,18:42:29.65:1744,30,0	1/1:15,27:47:99:2649,118,0	1/1:6,16:27:71.53:1236,72,0	1/1:17,23:48:99:2398,111,0	1/1:53,89:145:99:7192,246,0	1/1:17,30:62:99:3125,143,0	1/1:3,32:43:93.17:2225,93,0	1/1:18,37:65:99:2819,104,0	0/0:35,0:35:99:0,102,1816	1/1:17,42:79:99:4304,196,0	1/1:4,30:45:99:2396,117,0	1/1:6,25:34:61.75:1619,62,0
chr10	87439505	.	T	TCA	1511.08	PASS	AB=0.775;AC=8;AF=0.143;AN=56;BaseQRankSum=-6.454;DP=646;FS=1.326;HRun=0;HaplotypeScore=84.7544;InbreedingCoeff=0.7722;MQ=67.63;MQ0=2;MQRankSum=0.394;QD=19.13;ReadPosRankSum=2.831;VQSLOD=3.4946;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:90.22:0,90,1077	1/1:1,7:7:18.06:294,18,0	0/0:16,0:13:17.03:0,17,173	0/0:29,0:26:37.92:0,38,437	0/0:15,0:15:21.07:0,21,258	0/0:18,0:18:42.12:0,42,506	0/0:40,0:40:90.27:0,90,1095	0/0:27,0:27:54.14:0,54,625	0/0:20,0:20:48.13:0,48,578	0/1:8,11:19:0.83:480,0,1	1/1:2,10:13:24.08:388,24,0	0/0:24,0:25:60.01:0,60,704	0/0:20,0:20:42.13:0,42,517	0/0:28,0:28:78.22:0,78,937	0/0:22,0:22:57.16:0,57,678	0/0:28,0:29:74.94:0,75,862	1/1:3,12:17:27.09:440,27,0	0/0:24,0:24:62.83:0,63,722	0/0:21,0:21:36.08:0,36,416	0/0:14,0:14:42.12:0,42,505	0/0:53,0:56:99:0,132,1453	0/0:22,0:23:57.01:0,57,679	0/0:16,0:16:42.13:0,42,517	0/0:39,2:42:13.22:0,13,1131	0/0:19,0:19:51.14:0,51,607	0/1:20,2:22:62.35:62,0,302	0/0:15,0:17:38.79:0,39,434	0/0:10,0:10:30.09:0,30,369
chr10	87440878	.	AGAG	A	2599.03	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=2.419;DP=390;FS=13.156;HRun=0;HaplotypeScore=77.7179;InbreedingCoeff=0.9075;MQ=51.89;MQ0=9;MQRankSum=-2.408;QD=16.66;ReadPosRankSum=-4.851;VQSLOD=0.8742;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:50.20:0,50,929	0/0:4,0:4:12.04:0,12,193	0/0:17,0:7:19.77:0,20,285	0/0:13,0:6:17.59:0,18,225	0/0:13,0:13:23.86:0,24,405	1/1:9,0:9:14.13:158,14,0	1/1:12,0:12:10.20:70,10,0	1/1:2,13:15:37.88:354,38,0	0/0:17,0:17:39:0,39,724	0/0:19,0:19:44.79:0,45,760	0/0:17,0:17:38.99:0,39,608	0/0:8,0:8:14.94:0,15,252	0/0:12,0:14:20.90:0,21,350	0/0:16,0:16:29.63:0,30,474	0/0:16,0:15:32.35:0,32,604	0/0:13,0:13:26.85:0,27,445	0/0:27,0:27:42.81:0,43,652	1/1:10,0:10:1.88:169,2,0	1/1:17,1:18:41.63:506,42,0	1/1:11,0:10:23.76:265,24,0	1/1:11,0:10:20.02:269,20,0	1/1:11,1:12:12.16:103,12,0	1/1:14,0:14:25.26:279,25,0	1/1:10,0:11:9.41:221,9,0	0/0:11,0:11:20.96:0,21,377	1/1:14,1:17:24.64:222,25,0	1/1:8,0:8:3.24:149,3,0	1/1:6,0:3:8.69:53,9,0
chr10	87443838	.	TACACACAC	T	7797.84	PASS	AB=0.698;AC=30;AF=0.536;AN=56;BaseQRankSum=8.022;DP=547;FS=28.592;HRun=0;HaplotypeScore=151.3769;InbreedingCoeff=0.6662;MQ=47.46;MQ0=4;MQRankSum=-10.374;QD=25.24;ReadPosRankSum=1.692;VQSLOD=2.8571;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:43:27.44:0,27,630	1/1:3,10:13:14.72:455,15,0	0/0:26,0:20:9.03:0,9,305	0/0:25,0:17:23.24:0,23,460	0/0:19,0:20:51.18:0,51,1772	1/1:9,3:12:14.31:355,14,0	0/1:18,13:32:32.56:579,0,33	1/1:19,3:22:6.52:398,7,0	0/0:10,0:10:24.08:0,24,888	0/1:12,8:21:59.66:752,0,60	1/1:4,11:15:20.71:536,21,0	0/0:14,0:15:30.10:0,30,1025	0/0:17,0:18:48.13:0,48,1684	0/0:19,0:19:45.15:0,45,1784	0/0:23,0:23:45.10:0,45,1297	0/0:12,0:13:27.08:0,27,1024	0/1:20,6:26:7.98:482,0,8	1/1:7,8:15:18.06:457,18,0	1/1:8,2:9:11.98:152,12,0	1/1:5,8:13:20.94:420,21,0	1/1:18,2:17:5.93:92,6,0	1/1:10,13:23:32.85:610,33,0	1/1:5,9:16:23.89:358,24,0	1/1:14,14:28:19.48:341,19,0	0/0:23,0:23:51.16:0,51,1748	0/1:6,15:21:26.32:972,0,26	1/1:3,11:15:27.02:610,27,0	1/1:4,2:6:9.03:229,9,0
chr10	87443901	.	GCGCGCA	G	2892.69	PASS	AB=0.835;AC=21;AF=0.375;AN=56;BaseQRankSum=6.712;DP=435;FS=7.192;HRun=0;HaplotypeScore=157.5986;InbreedingCoeff=0.6574;MQ=57.08;MQ0=1;MQRankSum=-10.338;QD=16.82;ReadPosRankSum=-1.479;VQSLOD=2.6397;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:72.22:0,72,2366	0/0:9,0:9:8.56:0,9,216	0/0:9,0:4:6.01:0,6,68	0/0:14,0:8:11.53:0,12,63	0/0:10,0:10:27.08:0,27,764	0/1:11,4:15:46.14:209,0,46	1/1:23,12:35:11.79:497,12,0	1/1:6,2:8:13.79:135,14,0	0/0:15,0:15:45.11:0,45,1302	0/0:16,0:16:14.24:0,14,435	0/0:19,0:19:17.89:0,18,550	0/0:17,0:17:45.13:0,45,1282	0/0:15,0:15:36.11:0,36,1054	0/0:18,0:18:48.15:0,48,1555	0/0:18,0:18:45.13:0,45,1239	0/0:13,0:13:33.06:0,33,837	0/0:27,0:27:31.11:0,31,596	1/1:5,3:8:15.05:332,15,0	1/1:10,1:9:24.34:439,24,0	1/1:4,5:9:6.40:41,6,0	0/0:5,3:8:0.47:0,0,1	0/1:12,1:13:52.61:61,0,53	1/1:8,0:8:6.40:41,6,0	1/1:18,10:28:6.77:97,7,0	0/0:18,0:18:54.17:0,54,1723	0/1:16,6:22:60.91:754,0,61	1/1:6,5:11:15.05:308,15,0	1/1:3,1:4:11.97:177,12,0
chr10	87443904	.	CG	C	409.04	PASS	AB=0.815;AC=16;AF=0.286;AN=56;BaseQRankSum=7.177;DP=421;FS=0.000;HRun=1;HaplotypeScore=141.4249;InbreedingCoeff=0.2683;MQ=57.69;MQ0=1;MQRankSum=-8.125;QD=2.66;ReadPosRankSum=1.339;VQSLOD=-0.4202;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:72.24:0,72,1109	0/0:8,0:8:7.85:0,8,101	0/1:10,0:4:5:5,0,32	0/0:14,0:8:0.22:0,0,65	0/0:10,0:10:27.09:0,27,419	0/1:11,3:14:3.27:27,0,3	1/1:17,17:34:17.59:131,18,0	0/1:7,0:7:2.66:3,0,64	0/0:15,0:15:42.14:0,42,641	0/0:16,0:16:18.53:0,19,255	0/0:18,0:18:17.09:0,17,241	0/0:19,0:19:51.17:0,51,770	0/0:15,0:15:39.12:0,39,565	0/0:17,0:17:48.16:0,48,746	0/0:18,0:18:47.65:0,48,683	0/0:13,0:13:30.10:0,30,460	0/0:29,0:29:16.32:0,16,323	1/1:4,2:6:13.72:65,14,0	0/1:5,5:9:30.89:69,0,31	1/1:7,1:8:5.93:40,6,0	0/0:6,3:9:6.11:0,6,18	0/0:6,4:10:2.99:0,3,15	1/1:2,4:6:3.32:21,3,0	0/1:17,8:25:4.52:12,0,5	0/0:20,0:20:57.17:0,57,866	0/1:14,6:20:56.96:120,0,57	0/1:8,2:10:22.27:55,0,22	0/1:2,2:4:18.91:25,0,19
chr10	87443906	.	CA	C	43.87	PASS	AB=0.798;AC=14;AF=0.250;AN=56;BaseQRankSum=7.422;DP=425;FS=2.199;HRun=1;HaplotypeScore=139.0167;InbreedingCoeff=0.3565;MQ=58.93;MQ0=2;MQRankSum=-8.334;QD=0.30;ReadPosRankSum=2.866;VQSLOD=-0.5720;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:75.26:0,75,1194	0/0:7,0:7:8.06:0,8,99	0/1:11,0:4:1.58:2,0,51	0/0:15,0:9:8.79:0,9,81	0/0:10,0:10:30.10:0,30,476	0/1:10,3:13:2.58:13,0,3	1/1:16,17:33:4.41:31,4,0	0/0:7,0:7:0.51:0,1,46	0/0:15,0:15:45.15:0,45,714	0/0:16,0:16:21.50:0,21,286	0/0:19,0:19:17.09:0,17,246	0/0:20,0:20:48.16:0,48,758	0/0:13,0:13:39.13:0,39,622	0/0:18,0:18:48.16:0,48,766	0/0:20,0:20:50.67:0,51,770	0/0:14,0:14:36.09:0,36,540	0/0:29,0:29:19.38:0,19,330	1/1:4,2:6:10.39:31,10,0	0/1:5,5:9:21.11:25,0,21	0/1:7,1:8:0.14:0,0,0	0/0:6,3:9:2.04:0,2,7	0/0:6,4:10:7.61:0,8,24	1/1:3,4:7:0.30:1,0,0	0/1:17,8:25:1.77:2,0,4	0/0:22,0:22:66.22:0,66,1037	0/1:13,6:19:32.89:43,0,33	0/1:8,2:10:0.32:23,0,0	0/1:2,2:4:0.70:7,0,1
chr10	87443909	.	GCC	G	959.68	PASS	AB=0.815;AC=16;AF=0.286;AN=56;BaseQRankSum=8.311;DP=436;FS=6.564;HRun=3;HaplotypeScore=141.4640;InbreedingCoeff=0.2728;MQ=55.66;MQ0=2;MQRankSum=-9.315;QD=5.16;ReadPosRankSum=0.891;VQSLOD=-0.0773;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:75.03:0,75,1362	0/0:7,0:7:8.46:0,8,89	0/0:10,0:3:8.48:0,8,47	0/1:11,0:8:2.14:2,0,31	0/0:11,0:11:27.06:0,27,416	0/1:10,3:13:9.37:65,0,9	0/1:19,17:36:6.65:124,0,7	1/1:7,0:7:4.93:39,5,0	0/0:16,0:16:48.15:0,48,885	0/0:17,0:17:21.05:0,21,321	0/0:21,0:21:17.69:0,18,264	0/0:18,0:18:51.13:0,51,879	0/0:15,0:15:39.12:0,39,703	0/0:18,0:18:51.17:0,51,945	0/0:20,0:20:52.76:0,53,975	0/0:12,0:12:32.81:0,33,589	0/1:28,0:28:17.77:18,0,181	1/1:5,2:7:5.97:103,6,0	1/1:4,5:8:21.17:150,21,0	0/0:7,1:8:1.97:0,2,7	0/0:6,3:9:2.52:0,3,12	0/1:7,4:11:4.73:5,0,40	0/0:6,4:10:2.19:0,2,12	0/1:18,8:26:17.86:18,0,26	0/0:26,0:26:72.18:0,72,1208	0/1:15,7:22:11.27:331,0,11	0/1:9,2:11:6.13:160,0,6	1/1:2,2:4:11.99:108,12,0
chr10	87443914	.	C	CGT	2314.50	PASS	AB=0.925;AC=30;AF=0.536;AN=56;BaseQRankSum=10.378;DP=466;FS=1.593;HRun=0;HaplotypeScore=146.0446;InbreedingCoeff=0.5422;MQ=53.48;MQ0=5;MQRankSum=-12.207;QD=8.45;ReadPosRankSum=-3.441;VQSLOD=2.9340;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:72.69:0,73,965	1/1:7,0:7:6.29:31,6,0	0/0:16,0:5:3.81:0,4,22	0/1:13,0:7:13.64:14,0,23	0/0:14,0:13:35.37:0,35,382	0/1:9,4:13:6.39:107,0,6	1/1:35,5:40:33.40:296,33,0	1/1:10,1:11:24:263,24,0	0/0:17,0:17:51.13:0,51,658	0/1:19,0:19:4.64:41,0,5	0/1:18,0:18:5.70:6,0,31	0/0:20,0:20:51.15:0,51,665	0/0:14,0:14:39.11:0,39,508	0/0:24,0:24:63.09:0,63,764	0/0:20,0:20:45.36:0,45,588	0/0:14,0:14:38.73:0,39,449	0/1:25,0:25:7.64:56,0,8	1/1:6,1:7:18.02:220,18,0	1/1:9,0:8:21.06:235,21,0	1/1:10,1:11:3.40:20,3,0	1/1:6,3:9:2.74:12,3,0	1/1:7,4:12:9.17:78,9,0	1/1:9,4:13:7.28:35,7,0	0/1:19,7:26:3.23:43,0,3	0/0:22,0:22:66.17:0,66,858	1/1:18,7:25:50.75:649,51,0	1/1:8,3:11:26.66:275,27,0	1/1:4,1:5:8.09:132,8,0
chr10	87443921	.	G	GCGCACACACACACA	11003.73	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=9.220;DP=566;FS=5.552;HRun=0;HaplotypeScore=260.2655;InbreedingCoeff=0.7571;MQ=49.53;MQ0=11;MQRankSum=-12.493;QD=32.65;ReadPosRankSum=-2.731;VQSLOD=3.1854;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:41:93.18:0,93,2665	1/1:4,3:13:11.77:597,12,0	0/0:26,0:6:6.88:0,7,74	0/0:15,0:7:2.18:0,2,51	0/0:15,0:15:41.93:0,42,1639	1/1:11,0:11:3.62:467,4,0	1/1:46,0:46:30.70:604,31,0	1/1:12,0:11:25.91:337,26,0	0/0:17,0:19:54.07:0,54,1659	1/1:13,18:32:56.03:2528,56,0	1/1:20,1:21:9:143,9,0	0/0:21,0:21:60.08:0,60,2048	0/0:11,0:14:39.07:0,39,1278	0/0:22,0:23:66.12:0,66,2125	0/0:14,0:17:51.13:0,51,1711	0/0:15,0:15:32.35:0,32,1400	1/1:4,3:26:14.95:824,15,0	1/1:7,0:7:17.69:245,18,0	1/1:9,0:7:19.84:367,20,0	1/1:14,0:14:3.05:152,3,0	0/1:11,0:9:0.04:0,0,0	1/1:20,0:20:4.50:167,5,0	1/1:16,0:16:1.60:168,2,0	1/1:31,0:30:2.10:156,2,0	0/0:19,0:21:63.12:0,63,2004	1/1:37,0:37:66.13:1890,66,0	1/1:23,0:23:41.36:1918,41,0	0/1:8,0:8:0.73:438,0,1
chr10	87444148	.	T	TG	4519	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-8.932;DP=644;FS=3.795;HRun=8;HaplotypeScore=67.7770;InbreedingCoeff=0.9946;MQ=86.20;MQ0=0;MQRankSum=-2.648;QD=26.12;ReadPosRankSum=-1.613;VQSLOD=5.1178;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:87.04:0,87,796	0/0:8,0:8:21.01:0,21,192	0/0:23,0:23:23.65:0,24,398	0/0:26,0:26:29.95:0,30,267	0/0:12,0:12:33.02:0,33,302	0/0:21,0:21:42:0,42,380	0/0:38,0:38:96.04:0,96,878	1/1:3,18:21:51.62:590,52,0	0/0:26,0:26:69.03:0,69,632	0/0:16,0:16:42.02:0,42,383	0/0:11,0:11:17.98:0,18,165	0/0:18,0:18:45:0,45,406	0/0:27,0:27:60.01:0,60,548	0/0:33,0:33:84.03:0,84,769	0/0:29,0:30:77.07:0,77,692	0/0:30,0:30:63:0,63,576	0/0:24,0:24:66.03:0,66,604	0/0:22,0:22:54.02:0,54,494	1/1:5,17:22:51.15:587,51,0	1/1:1,9:10:21.06:240,21,0	1/1:4,35:39:90.27:1039,90,0	0/0:11,0:11:24.01:0,24,219	0/0:10,0:10:18:0,18,163	0/0:32,0:32:87.03:0,87,796	0/0:18,0:18:48.01:0,48,439	1/1:10,20:30:57.14:644,57,0	1/1:4,29:32:78.23:900,78,0	1/1:3,15:18:45.13:519,45,0
chr10	87444957	.	AACACACACACACACAC	A	891.78	PASS	AB=0.835;AC=10;AF=0.192;AN=52;BaseQRankSum=5.191;DP=572;FS=2.359;HRun=0;HaplotypeScore=227.1375;InbreedingCoeff=0.6036;MQ=63.45;MQ0=29;MQRankSum=-2.655;QD=8.74;ReadPosRankSum=0.357;VQSLOD=2.3519;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:39.10:0,39,795	1/1:3,0:6:5.14:209,5,0	0/0:30,0:20:1.55:0,2,4	0/0:32,0:23:15.01:0,15,248	0/0:22,0:21:36.08:0,36,1807	./.	./.	0/0:25,0:24:34.60:0,35,957	0/0:20,0:17:24.08:0,24,1245	1/1:14,0:22:17.66:321,18,0	0/1:7,0:11:0:0,0,0	0/0:22,0:22:30.57:0,31,1866	0/0:14,0:15:21.54:0,22,1090	0/0:22,0:22:30.10:0,30,1643	0/0:23,0:20:19.72:0,20,1756	0/0:21,0:21:39.13:0,39,2261	1/1:11,6:17:4.57:94,5,0	1/1:7,7:14:8.69:343,9,0	0/0:17,0:17:17.27:0,17,567	0/0:12,0:12:3.01:0,3,211	0/0:36,0:31:42.12:0,42,2010	0/0:10,4:15:5.87:0,6,40	0/0:7,7:15:2.99:0,3,25	0/0:13,10:26:0:0,0,0	0/0:14,0:13:18.06:0,18,870	0/1:26,0:25:62.32:62,0,3124	0/0:20,0:20:24.55:0,25,1300	0/0:9,0:4:12.04:0,12,530
chr10	87445975	.	T	TGG	1084.99	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-2.258;DP=644;FS=3.353;HRun=9;HaplotypeScore=95.8584;InbreedingCoeff=0.9329;MQ=79.54;MQ0=0;MQRankSum=-2.308;QD=15.96;ReadPosRankSum=-1.640;VQSLOD=1.7952;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,114,1204	1/1:7,4:11:15.46:184,15,0	0/0:12,0:12:17.96:0,18,175	0/0:20,0:21:38.60:0,39,382	0/0:22,0:22:60.12:0,60,630	0/0:17,0:17:45.04:0,45,461	0/0:26,0:26:59.84:0,60,610	0/0:22,0:22:36.02:0,36,383	0/0:22,0:22:45.07:0,45,479	1/1:10,4:15:15.03:209,15,0	1/1:2,4:8:3.01:46,3,0	0/0:34,0:34:84.17:0,84,878	0/0:23,0:23:60.09:0,60,629	0/0:17,0:17:42.10:0,42,444	0/0:18,0:18:45.10:0,45,479	0/0:22,0:22:54.11:0,54,575	1/1:9,23:34:53.67:794,54,0	0/0:24,0:24:63.12:0,63,658	0/0:19,0:19:48.01:0,48,488	0/0:25,0:25:54.11:0,54,574	0/0:48,0:49:90.39:0,90,1123	0/0:23,0:23:57.03:0,57,578	0/0:18,0:18:30:0,30,303	0/0:32,0:33:87.16:0,87,973	0/0:20,0:21:45.05:0,45,534	0/0:23,0:23:63.15:0,63,670	0/0:18,0:18:45.11:0,45,478	0/0:16,0:17:14.42:0,14,330
chr10	87448946	.	C	CTGCCCACCTGTTAGCT	7398.20	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=1.351;DP=578;FS=8.661;HRun=0;HaplotypeScore=224.3154;InbreedingCoeff=0.9817;MQ=87.53;MQ0=0;MQRankSum=-8.796;QD=57.35;ReadPosRankSum=-4.184;VQSLOD=2.7089;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:93.18:0,93,3260	0/0:10,0:10:21.02:0,21,580	0/0:25,0:25:26.15:0,26,499	0/0:20,0:20:20.87:0,21,216	0/0:33,0:33:68.92:0,69,2001	1/1:5,10:18:18.06:874,18,0	1/1:29,0:32:68.61:2022,69,0	0/0:26,0:26:14.97:0,15,382	0/0:14,0:14:36.08:0,36,1351	0/0:21,0:21:48.11:0,48,1669	0/0:18,0:18:51.06:0,51,1659	0/0:24,0:24:63.14:0,63,2202	0/0:19,0:19:39.13:0,39,1506	0/0:14,0:14:36.12:0,36,1462	0/0:18,0:18:29.99:0,30,800	0/0:22,0:22:57.18:0,57,2154	0/0:20,0:20:42.10:0,42,1543	1/1:12,7:19:15.05:979,15,0	0/0:23,0:23:35.90:0,36,788	0/0:22,0:22:48.03:0,48,1609	0/0:15,0:15:27.07:0,27,984	1/1:7,12:21:24:1384,24,0	1/1:9,9:19:12.04:839,12,0	1/1:6,12:20:21.07:1300,21,0	0/0:16,0:16:42.10:0,42,1434	0/0:21,0:21:45.01:0,45,1419	0/0:19,0:19:45.05:0,45,1668	0/0:10,0:10:27.04:0,27,943
chr10	87449454	.	CA	C	4030.26	PASS	AB=0.649;AC=32;AF=0.571;AN=56;BaseQRankSum=10.903;DP=610;FS=11.422;HRun=13;HaplotypeScore=71.6962;InbreedingCoeff=0.7372;MQ=61.86;MQ0=7;MQRankSum=-0.336;QD=10.36;ReadPosRankSum=2.042;VQSLOD=2.1029;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,2:46:51.69:0,52,933	0/1:2,8:10:11.32:92,0,11	0/1:29,1:14:1.05:1,0,110	0/0:27,1:11:5.68:0,6,56	0/0:26,0:27:59.91:0,60,558	1/1:4,20:25:32.52:393,33,0	1/1:3,13:17:17.92:250,18,0	1/1:6,1:24:37.77:122,38,0	0/0:14,0:14:29.84:0,30,256	1/1:6,11:17:38.71:280,39,0	1/1:2,21:24:58.56:411,59,0	0/0:24,0:24:59.95:0,60,538	0/0:20,1:21:22.67:0,23,351	0/0:9,0:9:23.98:0,24,218	0/0:17,1:19:16.92:0,17,295	0/0:13,1:14:8.14:0,8,241	1/1:4,17:22:53.16:379,53,0	1/1:2,20:22:56.67:416,57,0	1/1:10,1:17:24.05:96,24,0	1/1:6,0:19:34.63:100,35,0	1/1:4,0:22:32.59:94,33,0	1/1:5,18:23:47.70:350,48,0	1/1:6,16:22:44.71:328,45,0	0/1:6,28:34:30.18:460,0,30	0/0:15,0:17:44.89:0,45,414	1/1:4,0:25:40.69:118,41,0	1/1:2,0:22:34.63:100,35,0	0/1:1,0:12:3.78:39,0,4
chr10	87449548	.	G	GA	5002.89	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-9.706;DP=518;FS=1.189;HRun=9;HaplotypeScore=53.0891;InbreedingCoeff=0.9719;MQ=63.12;MQ0=12;MQRankSum=1.038;QD=23.94;ReadPosRankSum=-0.730;VQSLOD=5.3116;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,922	1/1:0,7:7:21.06:232,21,0	0/0:20,0:7:18.40:0,18,129	0/0:25,1:11:26.40:0,26,203	0/0:31,1:32:53.58:0,54,682	0/0:19,0:19:56.97:0,57,491	0/0:17,1:18:14.77:0,15,349	1/1:3,17:20:45.11:489,45,0	0/0:15,0:15:41.99:0,42,365	1/1:3,18:21:57.15:630,57,0	1/1:3,8:10:21.04:223,21,0	0/0:18,0:18:41.96:0,42,360	0/0:13,0:13:35.99:0,36,313	0/0:8,0:7:20.98:0,21,179	0/0:16,0:16:44.98:0,45,391	0/0:8,0:8:23.98:0,24,206	1/1:4,32:37:66.52:890,67,0	0/0:16,0:16:35.93:0,36,301	1/1:10,12:21:10.04:334,10,0	1/1:6,16:21:45.04:474,45,0	1/1:3,15:18:22.08:472,22,0	0/0:19,0:19:47.97:0,48,417	0/0:14,0:14:38.99:0,39,339	0/0:18,0:18:44.75:0,45,390	0/0:12,0:12:35.83:0,36,300	1/1:4,14:17:39.09:422,39,0	1/1:5,22:27:49.15:770,49,0	1/1:4,1:5:6.02:66,6,0
chr10	87449871	.	G	GT	1968.98	PASS	AB=0.998;AC=16;AF=0.286;AN=56;BaseQRankSum=10.948;DP=676;FS=2.094;HRun=9;HaplotypeScore=138.7637;InbreedingCoeff=0.2461;MQ=59.10;MQ0=16;MQRankSum=-8.092;QD=5.67;ReadPosRankSum=0.429;VQSLOD=0.8529;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:33:61.83:0,62,754	0/1:9,0:9:15.05:15,0,37	0/1:58,0:22:18.84:19,0,138	0/1:65,1:24:47.74:63,0,48	0/0:29,0:29:74.95:0,75,646	0/0:16,1:17:8.79:0,9,305	0/0:14,0:14:35.95:0,36,305	0/1:35,0:35:77.79:241,0,78	0/0:20,0:20:47.90:0,48,406	0/1:21,0:19:31.58:32,0,64	0/1:20,0:19:54.27:54,0,67	0/0:21,0:21:29.81:0,30,487	0/0:18,0:19:48.84:0,49,401	0/0:15,0:15:38.99:0,39,338	0/0:17,0:17:47.99:0,48,415	0/0:17,0:17:38.95:0,39,335	0/0:25,0:25:6.97:0,7,182	0/0:26,1:27:36:0,36,540	0/1:23,0:22:10.47:269,0,10	1/1:28,0:25:7.69:426,8,0	1/1:18,0:17:18.55:195,19,0	0/0:23,0:23:59.98:0,60,521	0/0:19,0:19:44.02:0,44,433	0/0:12,0:12:29.95:0,30,253	0/0:21,0:21:56.98:0,57,495	0/1:26,0:26:74.57:272,0,75	1/1:31,0:31:23.81:431,24,0	1/1:11,0:11:4.54:125,5,0
chr10	87449876	.	T	TG	4707.21	PASS	AB=0.637;AC=12;AF=0.214;AN=56;BaseQRankSum=2.532;DP=703;FS=3.062;HRun=0;HaplotypeScore=139.0619;InbreedingCoeff=0.7763;MQ=61.47;MQ0=18;MQRankSum=-5.651;QD=27.69;ReadPosRankSum=-1.612;VQSLOD=4.2214;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:92.08:0,92,1294	0/0:9,0:9:16.79:0,17,216	0/0:72,0:29:29.84:0,30,337	0/0:80,0:28:28.11:0,28,291	0/0:28,0:28:84.25:0,84,1125	0/0:18,0:18:43.97:0,44,617	0/0:13,0:13:36.12:0,36,501	0/1:15,18:33:19.08:751,0,19	0/0:18,0:18:54.16:0,54,717	0/0:19,0:17:20.15:0,20,285	0/0:20,0:19:25.01:0,25,373	0/0:21,0:21:56.83:0,57,832	0/0:19,0:19:54.06:0,54,693	0/0:16,0:16:42.13:0,42,569	0/0:17,0:17:48.16:0,48,670	0/0:18,0:18:54.13:0,54,676	0/0:26,0:26:47.68:0,48,611	0/0:29,0:29:65.93:0,66,981	1/1:6,18:23:19.94:668,20,0	1/1:5,22:24:23.25:836,23,0	1/1:6,11:16:34.12:481,34,0	0/0:22,0:22:66.21:0,66,893	0/0:22,0:22:50.20:0,50,753	0/0:12,0:12:30.10:0,30,417	0/0:21,0:21:63.20:0,63,852	0/1:11,16:27:18.31:656,0,18	1/1:10,21:31:60.13:1031,60,0	1/1:5,6:11:10.60:284,11,0
chr10	87449877	.	T	TTTTG	4472.37	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=11.399;DP=718;FS=1.251;HRun=0;HaplotypeScore=182.2916;InbreedingCoeff=0.3595;MQ=61.80;MQ0=18;MQRankSum=-9.246;QD=15.42;ReadPosRankSum=-0.196;VQSLOD=4.1520;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.13:0,93,1440	1/1:6,3:9:24.08:467,24,0	0/1:74,0:31:21.16:21,0,220	0/0:81,0:29:31.41:0,31,287	0/0:28,0:28:75.22:0,75,1151	0/0:18,0:18:38.79:0,39,493	0/0:13,0:13:27.09:0,27,434	0/0:37,0:37:13.36:0,13,311	0/0:18,0:18:48.10:0,48,761	1/1:16,5:19:55.50:870,56,0	1/1:13,8:20:50.43:980,50,0	0/0:21,0:21:60.04:0,60,950	0/0:19,0:19:54.15:0,54,773	0/0:16,0:16:45.13:0,45,683	0/0:17,0:17:51.16:0,51,816	0/0:18,0:18:42.13:0,42,629	1/1:23,3:26:42.12:856,42,0	0/0:29,0:29:75.03:0,75,1026	0/1:27,0:26:93.62:94,0,211	0/1:27,0:24:99:434,0,183	0/1:17,0:16:59.54:60,0,112	0/0:22,0:22:62.99:0,63,862	0/0:23,0:23:56.95:0,57,741	0/0:13,0:13:27.02:0,27,411	0/0:21,0:21:57.19:0,57,912	0/1:27,0:27:99:417,0,146	0/1:30,0:30:99:202,0,269	0/1:11,0:11:48.50:71,0,49
chr10	87449881	.	G	GTTTGT	7823.66	PASS	AB=0.995;AC=27;AF=0.482;AN=56;BaseQRankSum=12.371;DP=711;FS=1.974;HRun=0;HaplotypeScore=183.6925;InbreedingCoeff=0.6111;MQ=60.98;MQ0=18;MQRankSum=-12.344;QD=18.90;ReadPosRankSum=-2.124;VQSLOD=4.0281;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:84.23:0,84,1468	1/1:8,0:8:20.80:275,21,0	0/1:71,0:27:21.45:21,0,151	0/0:77,0:28:18.56:0,19,221	0/0:29,0:29:72.19:0,72,1225	0/1:16,0:16:29.90:30,0,279	0/0:13,0:13:24.07:0,24,277	1/1:32,0:38:65.21:671,65,0	0/0:16,0:16:45.13:0,45,815	1/1:22,0:20:50.90:778,51,0	1/1:21,0:20:47.65:745,48,0	0/0:21,0:21:54.10:0,54,826	0/0:20,0:20:42.11:0,42,683	0/0:16,0:16:39.12:0,39,703	0/0:19,0:19:54.13:0,54,894	0/0:16,0:16:41.98:0,42,690	1/1:25,0:26:31.40:605,31,0	0/1:30,0:30:15.81:16,0,637	1/1:22,2:26:50.83:677,51,0	1/1:13,13:23:65.04:1176,65,0	1/1:14,1:14:29.62:376,30,0	0/1:24,0:24:26.81:27,0,528	0/1:24,0:24:11.51:12,0,535	0/0:15,0:15:0.28:0,0,243	0/0:20,0:20:51.16:0,51,938	1/1:14,10:27:71.45:1302,71,0	1/1:20,6:28:59.12:890,59,0	1/1:6,2:8:14.84:224,15,0
chr10	87449885	.	GT	G	639.91	PASS	AB=0.823;AC=5;AF=0.089;AN=56;BaseQRankSum=2.651;DP=724;FS=10.300;HRun=4;HaplotypeScore=162.3731;InbreedingCoeff=-0.0055;MQ=59.34;MQ0=19;MQRankSum=-1.553;QD=4.18;ReadPosRankSum=-0.052;VQSLOD=-0.5314;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1402	0/1:4,4:8:5.65:127,0,6	0/1:74,0:28:6.43:6,0,380	0/0:78,1:26:48.91:0,49,442	0/0:33,0:33:93.30:0,93,1277	0/0:15,0:15:42.13:0,42,572	0/0:13,0:13:30.10:0,30,420	0/0:35,0:35:83.80:0,84,1027	0/0:17,0:17:51.15:0,51,695	0/1:19,4:21:99:172,0,252	0/1:16,5:20:99:170,0,123	0/0:20,0:20:60.20:0,60,840	0/0:21,0:21:60.19:0,60,812	0/0:17,0:17:48.15:0,48,653	0/0:21,0:21:63.20:0,63,863	0/0:15,0:15:45.15:0,45,629	0/1:19,7:26:99:279,0,211	0/0:31,0:31:81.23:0,81,1112	0/0:25,0:24:66.13:0,66,807	0/0:26,0:23:68.89:0,69,725	0/0:15,0:14:36.11:0,36,461	0/0:26,0:26:75.25:0,75,1046	0/0:24,0:24:68.89:0,69,918	0/0:18,0:18:45.15:0,45,622	0/0:19,0:19:57.19:0,57,797	0/0:29,0:29:77.91:0,78,849	0/0:27,0:27:78.04:0,78,926	0/0:10,0:10:21.01:0,21,250
chr10	87449900	.	C	CTTTTG	9938.67	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=11.826;DP=746;FS=1.445;HRun=0;HaplotypeScore=194.8111;InbreedingCoeff=0.7836;MQ=60.98;MQ0=12;MQRankSum=-13.114;QD=31.55;ReadPosRankSum=-3.995;VQSLOD=4.0157;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1935	1/1:4,4:8:9.78:501,10,0	0/0:75,0:29:29.39:0,29,659	0/0:77,0:30:19.30:0,19,519	0/0:33,0:33:96.25:0,96,1738	0/1:16,0:16:10.35:10,0,342	0/1:16,0:16:15.44:15,0,269	1/1:38,0:38:73.13:698,73,0	0/0:17,0:17:51.15:0,51,999	1/1:13,10:22:57.32:1602,57,0	1/1:13,11:23:69.01:1387,69,0	0/0:20,0:20:51.11:0,51,901	0/0:18,0:18:51.15:0,51,950	0/0:17,0:17:45.14:0,45,878	0/0:21,0:21:57.18:0,57,1114	0/0:18,0:18:42.13:0,42,827	1/1:19,8:27:53.45:1196,53,0	0/0:36,0:36:7.93:0,8,667	1/1:24,0:23:40.84:519,41,0	1/1:29,0:26:64.05:1193,64,0	1/1:15,0:15:24.38:346,24,0	0/0:25,0:25:38.11:0,38,693	0/1:29,0:29:7.26:7,0,613	0/0:22,0:22:27.92:0,28,332	0/0:17,0:17:51.18:0,51,1056	1/1:27,0:27:66.08:1296,66,0	1/1:29,0:29:59.09:897,59,0	1/1:10,0:10:20.83:273,21,0
chr10	87449914	.	GT	G	6082.48	PASS	AB=0.533;AC=33;AF=0.589;AN=56;BaseQRankSum=12.762;DP=678;FS=0.358;HRun=11;HaplotypeScore=136.8337;InbreedingCoeff=0.9009;MQ=61.38;MQ0=6;MQRankSum=-1.865;QD=15.72;ReadPosRankSum=1.443;VQSLOD=3.9588;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,1:36:65.38:0,65,867	1/1:4,3:7:8.86:65,9,0	0/0:49,1:21:15.73:0,16,213	0/0:47,1:20:6.02:0,6,222	0/0:30,1:31:53.52:0,54,754	1/1:2,14:16:35.94:295,36,0	1/1:4,13:18:34.99:277,35,0	1/1:14,22:37:26.90:417,27,0	0/0:16,0:16:42.05:0,42,405	1/1:7,21:28:62.84:517,63,0	1/1:9,16:24:47.44:370,47,0	0/0:19,0:19:45.11:0,45,479	0/0:15,0:15:36.07:0,36,369	0/0:13,2:15:8.40:0,8,278	0/0:20,0:20:51.12:0,51,538	0/0:17,0:17:48.11:0,48,505	1/1:6,22:28:48.57:415,49,0	1/1:8,30:38:44.86:601,45,0	1/1:1,16:17:44.91:364,45,0	1/1:9,16:22:29.67:231,30,0	0/1:1,7:8:7.99:143,0,8	1/1:4,20:24:56.89:468,57,0	1/1:4,24:28:59.92:493,60,0	1/1:4,25:29:39.04:447,39,0	0/0:22,0:22:48.10:0,48,502	1/1:8,15:25:48.91:374,49,0	1/1:4,16:21:49.84:387,50,0	1/1:2,11:13:26.97:221,27,0
chr10	87450075	.	CT	C	985	PASS	AB=0.805;AC=25;AF=0.446;AN=56;BaseQRankSum=3.381;DP=564;FS=2.254;HRun=16;HaplotypeScore=71.2491;InbreedingCoeff=0.1941;MQ=70.61;MQ0=2;MQRankSum=0.469;QD=3.01;ReadPosRankSum=3.669;VQSLOD=-0.2495;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,6:43:32.72:0,33,420	0/1:8,0:10:6.25:6,0,44	0/0:32,0:15:10.69:0,11,64	0/0:23,0:13:14.12:0,14,87	0/0:16,0:20:23.92:0,24,190	1/1:10,9:19:14.34:87,14,0	1/1:8,5:13:8.67:54,9,0	1/1:14,12:28:4.13:116,4,0	0/1:8,2:10:0.16:0,0,96	0/0:17,5:22:18.23:0,18,242	0/0:9,0:10:11.15:0,11,120	0/1:21,0:21:12.33:12,0,109	0/0:18,0:18:2.32:0,2,107	0/0:19,0:19:26.92:0,27,216	0/1:18,3:21:12.25:12,0,107	0/0:20,1:21:6.07:0,6,251	0/0:26,0:27:19.53:0,20,234	0/1:12,11:26:20.42:66,0,20	1/1:8,6:16:21.62:119,22,0	1/1:6,12:19:28.22:164,28,0	0/1:10,4:15:15.76:16,0,17	0/1:11,1:14:9.59:10,0,45	0/1:9,6:15:11.40:47,0,11	1/1:3,16:21:13.35:168,13,0	0/1:15,4:19:9.08:9,0,145	0/1:12,11:25:31.28:108,0,31	1/1:12,8:20:14.40:89,14,0	0/1:7,8:15:10.21:85,0,10
chr10	87451091	.	AG	A	1087.74	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=5.758;DP=322;FS=13.314;HRun=8;HaplotypeScore=40.0521;InbreedingCoeff=0.7697;MQ=88.00;MQ0=1;MQRankSum=-0.556;QD=20.92;ReadPosRankSum=1.867;VQSLOD=2.5611;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:42.11:0,42,494	1/1:1,3:4:9.01:87,9,0	0/0:18,0:16:32.43:0,32,376	0/0:23,0:19:16.03:0,16,231	0/0:14,0:14:39.11:0,39,457	0/0:11,0:11:33.10:0,33,398	0/0:18,0:18:51.16:0,51,615	0/0:3,0:2:3.47:0,3,28	0/0:17,0:17:48.10:0,48,543	1/1:2,18:20:54.08:521,54,0	1/1:2,11:13:33.05:319,33,0	0/0:25,0:25:57.17:0,57,684	0/0:9,0:9:27.07:0,27,313	0/0:6,0:6:18.06:0,18,217	0/0:21,0:21:60.14:0,60,680	0/0:13,0:13:33.05:0,33,381	1/1:0,10:10:30.05:290,30,0	0/0:10,0:10:18.06:0,18,217	0/0:2,0:2:2.90:0,3,16	0/0:2,0:2:2.94:0,3,18	0/1:2,0:2:0.01:0,0,0	0/0:17,0:17:42.06:0,42,506	0/0:16,0:16:39.11:0,39,460	0/0:9,0:9:24.07:0,24,290	0/0:15,0:15:42.10:0,42,482	1/1:2,1:3:3:29,3,0	0/0:4,0:4:2.84:0,3,14	./.
chr10	87451270	.	AACAACACAACAACCACAACAAAAACC	A	4490.02	PASS	AB=0.552;AC=7;AF=0.125;AN=56;BaseQRankSum=8.700;DP=659;FS=2.435;HRun=0;HaplotypeScore=403.7847;InbreedingCoeff=0.8153;MQ=74.05;MQ0=6;MQRankSum=-3.323;QD=71.27;ReadPosRankSum=2.167;VQSLOD=3.0872;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:81.22:0,81,6613	1/1:2,6:8:6:421,6,0	0/0:61,0:37:97.41:0,97,5391	0/0:72,0:52:99:0,99,6777	0/0:14,0:14:39.12:0,39,3693	0/0:18,0:18:54.19:0,54,5221	0/0:28,0:28:75.26:0,75,7745	0/0:27,0:26:78.27:0,78,4435	0/0:35,0:35:99:0,102,9344	1/1:4,21:25:42.06:1824,42,0	0/1:3,13:16:8.51:1192,0,9	0/0:30,0:30:90.31:0,90,8968	0/0:21,0:21:63.22:0,63,6247	0/0:17,0:17:51.18:0,51,4288	0/0:30,0:30:87.30:0,87,9476	0/0:25,0:25:75.26:0,75,7153	1/1:3,11:14:15.05:1053,15,0	0/0:12,0:12:36.12:0,36,3715	0/0:13,0:13:33.11:0,33,3183	0/0:13,0:13:36.12:0,36,3028	0/0:34,0:34:69.13:0,69,4975	0/0:20,0:20:57.20:0,57,5595	0/0:12,0:12:33.11:0,33,2855	0/0:24,0:24:69.24:0,69,7064	0/0:24,0:24:72.20:0,72,6292	0/0:16,0:16:45.15:0,45,3211	0/0:7,0:7:21.07:0,21,2249	0/0:11,0:11:30.10:0,30,3324
chr10	87451275	.	C	CACA	5208.13	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-10.181;DP=667;FS=3.156;HRun=0;HaplotypeScore=125.6350;InbreedingCoeff=0.9704;MQ=76.40;MQ0=6;MQRankSum=-0.010;QD=38.30;ReadPosRankSum=-0.607;VQSLOD=5.6355;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:75.17:0,75,1087	0/0:6,0:6:5.82:0,6,42	0/0:62,0:38:80.59:0,81,1031	0/0:77,0:56:82.57:0,83,1284	0/0:12,0:12:36.09:0,36,511	0/0:18,0:18:51.16:0,51,760	0/0:26,0:26:72.23:0,72,1087	1/1:9,21:29:63.20:1221,63,0	0/0:34,0:34:90.28:0,90,1339	0/0:21,0:21:20.69:0,21,139	0/0:14,0:15:12.44:0,12,101	0/0:30,0:30:81.26:0,81,1203	0/0:21,0:21:60.17:0,60,880	0/0:18,0:18:45.14:0,45,664	0/0:33,0:33:93.31:0,93,1417	0/0:25,0:25:70.75:0,71,1017	0/0:11,0:11:14.88:0,15,105	0/0:12,0:12:30.08:0,30,442	1/1:4,11:19:45.09:779,45,0	1/1:1,11:12:29.98:522,30,0	1/1:8,26:34:48.16:986,48,0	0/0:19,0:19:57.19:0,57,868	0/0:11,0:11:27.09:0,27,414	0/0:26,0:26:69.20:0,69,1015	0/0:25,0:25:63.19:0,63,929	1/1:6,12:19:33.05:606,33,0	1/1:0,9:11:21.07:449,21,0	1/1:0,11:11:30.10:644,30,0
chr10	87451644	.	C	CACAAA	6264.33	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-0.953;DP=699;FS=31.348;HRun=0;HaplotypeScore=131.5698;InbreedingCoeff=0.9983;MQ=81.49;MQ0=0;MQRankSum=-8.181;QD=56.44;ReadPosRankSum=-0.112;VQSLOD=3.0686;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,114,2174	0/0:9,0:9:24.08:0,24,469	0/0:28,0:28:72.22:0,72,1346	0/0:18,0:19:43.32:0,43,809	0/0:19,0:19:45.12:0,45,806	1/1:5,15:20:26.26:1291,26,0	1/1:5,11:16:24.08:718,24,0	0/0:43,0:43:93.03:0,93,1635	0/0:30,0:30:78.25:0,78,1488	0/0:28,0:27:75.25:0,75,1465	0/0:17,0:17:42.14:0,42,832	0/0:24,0:24:57.16:0,57,1058	0/0:18,0:18:45.15:0,45,899	0/0:22,0:22:54.18:0,54,1045	0/0:25,0:25:75.21:0,75,1354	0/0:27,0:27:69.20:0,69,1262	0/0:23,0:23:57.20:0,57,1139	1/1:2,20:22:57.12:1570,57,0	0/0:28,0:28:63.18:0,63,1101	0/0:20,0:20:51.17:0,51,975	0/0:44,0:44:99:0,120,2193	1/1:8,15:23:45.15:1236,45,0	1/1:1,8:9:24.08:711,24,0	1/1:1,20:21:27.05:739,27,0	0/0:25,0:25:66.22:0,66,1270	0/0:24,0:24:57.20:0,57,1140	0/0:39,0:39:99:0,102,1935	0/0:27,0:27:66.23:0,66,1292
chr10	87451807	.	GGT	G	1032.01	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=4.226;DP=419;FS=1.839;HRun=0;HaplotypeScore=65.8238;InbreedingCoeff=0.8000;MQ=28.78;MQ0=130;MQRankSum=-0.695;QD=14.74;ReadPosRankSum=1.067;VQSLOD=3.5679;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:13:30.10:0,30,538	1/1:3,3:4:6.02:84,6,0	./.	./.	0/0:15,0:12:33.11:0,33,592	0/0:11,0:9:18.06:0,18,320	0/0:10,0:2:3.01:0,3,54	0/0:24,0:21:57.19:0,57,1008	0/0:13,0:12:33.11:0,33,592	1/1:3,17:17:48.16:671,48,0	1/1:2,5:5:6.02:84,6,0	0/0:13,0:9:18.06:0,18,323	0/0:11,0:9:24.08:0,24,430	0/0:12,0:9:21.07:0,21,377	0/0:11,0:10:24.08:0,24,431	0/0:17,0:13:36.12:0,36,645	1/1:23,14:14:24.08:336,24,0	0/0:26,0:13:30.06:0,30,505	0/0:25,0:21:51.17:0,51,904	0/0:20,0:18:45.15:0,45,807	0/0:26,0:2:6.02:0,6,108	0/0:7,0:7:9.03:0,9,161	0/0:7,0:5:9.03:0,9,146	0/0:4,0:2:6.02:0,6,108	0/0:18,0:16:39.13:0,39,698	0/0:21,0:20:51.17:0,51,899	0/0:22,0:19:54.19:0,54,970	0/0:9,0:6:15.05:0,15,270
chr10	87451861	.	TA	T	1711.94	PASS	AB=0.750;AC=14;AF=0.250;AN=56;BaseQRankSum=0.998;DP=311;FS=11.609;HRun=10;HaplotypeScore=44.5216;InbreedingCoeff=0.6060;MQ=61.87;MQ0=21;MQRankSum=-0.202;QD=16.30;ReadPosRankSum=0.696;VQSLOD=2.6662;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:39.02:0,39,407	0/0:7,0:6:18.04:0,18,193	0/0:10,0:8:5.05:0,5,103	0/0:3,0:2:3:0,3,28	0/0:11,0:10:27.06:0,27,292	0/0:16,1:16:19.07:0,19,438	0/0:4,0:4:11.87:0,12,114	1/1:8,20:22:20.80:407,21,0	0/0:5,0:5:15.01:0,15,147	0/0:10,0:8:15.03:0,15,152	0/0:18,0:18:51.12:0,51,555	0/0:4,0:3:3.01:0,3,33	0/1:4,1:4:17.03:17,0,57	0/0:12,0:12:30.08:0,30,332	0/0:2,0:2:3.01:0,3,33	0/0:8,0:8:24.06:0,24,262	0/0:26,1:23:27.90:0,28,491	0/0:27,0:24:57.15:0,57,630	1/1:1,15:15:41.99:364,42,0	1/1:1,13:14:35.77:287,36,0	1/1:1,1:1:3:26,3,0	0/0:2,0:2:3.01:0,3,33	0/0:1,0:1:3.01:0,3,33	0/0:5,0:5:15.03:0,15,158	0/0:13,1:13:10.02:0,10,324	0/1:5,5:10:15.19:112,0,15	1/1:2,11:13:29.98:260,30,0	1/1:0,17:17:47.99:417,48,0
chr10	87451906	.	CA	C	1030.30	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.048;DP=363;FS=2.897;HRun=9;HaplotypeScore=60.4441;InbreedingCoeff=0.8625;MQ=63.99;MQ0=0;MQRankSum=-0.735;QD=17.76;ReadPosRankSum=0.614;VQSLOD=3.7765;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:20:48.10:0,48,538	0/0:9,0:9:27.08:0,27,312	0/0:6,0:6:11.88:0,12,100	0/0:5,0:4:5.95:0,6,48	0/0:26,0:26:78.22:0,78,890	1/1:1,13:14:33.01:302,33,0	1/1:2,9:11:24.01:219,24,0	0/0:20,0:20:54.08:0,54,581	0/0:8,0:8:21.06:0,21,242	0/0:13,0:13:39.12:0,39,450	0/0:22,2:24:8.22:0,8,588	0/0:4,0:4:12.04:0,12,138	0/0:6,0:6:18.05:0,18,208	0/0:10,0:10:30.09:0,30,346	0/0:5,0:5:15.04:0,15,173	0/0:6,0:6:11.99:0,12,124	0/0:26,0:26:66.67:0,67,762	1/1:3,17:20:44.04:410,44,0	0/0:22,0:22:54.16:0,54,623	0/0:18,0:18:51.07:0,51,555	0/0:2,0:2:3.01:0,3,35	1/1:1,4:5:12.01:110,12,0	1/1:0,3:3:3:27,3,0	1/1:0,5:5:15.01:137,15,0	0/0:21,0:21:60.15:0,60,679	0/0:9,0:9:27.08:0,27,311	0/0:15,0:15:44.94:0,45,481	0/0:28,0:28:81.24:0,81,935
chr10	87451963	.	AC	A	1487.20	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=9.179;DP=430;FS=0.000;HRun=3;HaplotypeScore=91.8787;InbreedingCoeff=0.6744;MQ=68.93;MQ0=10;MQRankSum=-8.924;QD=10.26;ReadPosRankSum=3.933;VQSLOD=1.4872;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:16.09:0,16,172	0/0:9,0:9:22.86:0,23,264	0/0:51,0:18:39.96:0,40,296	0/0:39,0:16:32.65:0,33,292	0/0:28,0:28:75.11:0,75,920	1/1:3,6:9:24.04:267,24,0	1/1:3,8:11:32.86:353,33,0	0/0:34,0:34:5.59:0,6,247	0/0:8,0:8:21.07:0,21,301	0/0:10,0:9:27.06:0,27,347	0/0:13,0:13:39:0,39,485	0/0:9,0:9:24.54:0,25,327	0/0:10,0:10:22.26:0,22,315	0/0:6,0:6:18.05:0,18,242	0/0:8,0:8:21.06:0,21,276	0/0:5,0:5:15.05:0,15,214	0/0:19,0:19:46.09:0,46,472	1/1:5,5:10:16.77:263,17,0	0/1:22,0:22:18.37:18,0,77	0/1:16,0:16:19.18:43,0,19	1/1:5,0:5:8.33:25,8,0	1/1:1,6:6:11.51:164,12,0	1/1:0,7:7:21.06:255,21,0	1/1:3,6:7:15.04:170,15,0	0/0:18,0:18:50.78:0,51,627	0/1:11,0:10:3.36:28,0,3	0/1:12,0:12:17.23:17,0,59	1/1:26,0:26:24.60:88,25,0
chr10	87451966	.	CT	C	2776.46	PASS	AB=0.957;AC=27;AF=0.482;AN=56;BaseQRankSum=4.425;DP=439;FS=9.527;HRun=10;HaplotypeScore=88.4654;InbreedingCoeff=0.7513;MQ=67.00;MQ0=10;MQRankSum=-6.890;QD=13.41;ReadPosRankSum=2.714;VQSLOD=3.0504;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,1:24:36.26:36,0,49	0/0:9,0:9:17.41:0,17,174	0/0:51,1:17:2.09:0,2,96	0/0:41,0:16:29.15:0,29,213	0/0:30,0:30:65.80:0,66,656	1/1:9,0:9:19.69:116,20,0	1/1:11,0:11:22.81:127,23,0	1/1:12,18:30:50.65:451,51,0	0/0:9,0:9:24.02:0,24,252	0/0:10,0:9:21.02:0,21,220	0/0:15,0:15:33.07:0,33,347	0/0:10,0:10:21.52:0,22,224	0/1:9,1:10:1.98:2,0,208	0/0:6,0:6:15.04:0,15,166	0/0:7,0:7:18.05:0,18,199	0/0:6,0:6:15.04:0,15,166	0/0:18,1:19:13.57:0,14,316	0/1:12,0:12:32.90:60,0,33	1/1:2,17:19:50.97:436,51,0	1/1:2,14:16:41.96:356,42,0	1/1:0,5:5:11.99:101,12,0	1/1:7,0:6:6.77:64,7,0	1/1:7,0:7:20.18:115,20,0	1/1:9,0:7:11.81:76,12,0	0/0:18,0:18:44.60:0,45,466	1/1:3,8:10:26.96:224,27,0	1/1:5,6:11:23.98:205,24,0	1/1:5,20:25:74.62:623,75,0
chr10	87451976	.	TC	T	716.98	PASS	AB=0.955;AC=21;AF=0.375;AN=56;BaseQRankSum=7.396;DP=433;FS=8.945;HRun=1;HaplotypeScore=94.3646;InbreedingCoeff=0.5994;MQ=62.52;MQ0=15;MQRankSum=-7.685;QD=3.30;ReadPosRankSum=1.212;VQSLOD=-0.3865;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:24:3.26:38,0,3	0/0:7,0:7:18.01:0,18,189	0/0:48,0:13:1.08:0,1,84	0/1:40,2:15:5.38:5,0,105	0/0:24,0:24:66.16:0,66,768	0/1:9,1:10:19.87:20,0,29	0/1:9,0:9:5.40:5,0,28	1/1:23,0:22:33.87:137,34,0	0/0:10,0:10:27.01:0,27,297	0/0:10,1:9:19.29:0,19,215	0/0:17,0:17:23.01:0,23,313	0/0:8,0:8:21.20:0,21,212	0/0:9,0:9:17.02:0,17,242	0/0:5,0:5:15.03:0,15,170	0/0:8,0:8:24:0,24,250	0/0:8,0:8:7.73:0,8,195	0/0:17,0:16:15.83:0,16,311	0/0:19,0:18:10.74:0,11,190	1/1:21,0:21:16.15:108,16,0	1/1:17,0:17:37.93:165,38,0	1/1:6,0:6:10.52:47,11,0	1/1:6,0:5:3.80:20,4,0	0/0:8,0:8:5.01:0,5,36	0/1:9,1:8:2.18:2,0,18	0/0:17,0:17:44.33:0,44,512	1/1:12,0:11:21.21:73,21,0	1/1:11,0:11:22.19:97,22,0	1/1:25,0:25:49.61:191,50,0
chr10	87451977	.	CTTTTTCTTTTTTTTTTTT	C	486.67	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.022;DP=425;FS=0.000;HRun=0;HaplotypeScore=206.8264;InbreedingCoeff=0.7762;MQ=60.44;MQ0=15;MQRankSum=0.278;QD=20.28;ReadPosRankSum=-0.605;VQSLOD=2.4980;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,19:23:15.05:575,15,0	0/0:7,0:7:18.05:0,18,632	0/0:46,0:12:3.70:0,4,255	0/0:41,0:14:25.49:0,25,418	0/0:25,0:25:69.24:0,69,3968	0/0:10,0:10:27.09:0,27,1490	0/0:9,0:9:27.09:0,27,1119	0/0:21,0:21:60.18:0,60,1626	0/0:10,0:10:27.09:0,27,1730	0/0:11,0:9:21.96:0,22,867	0/0:16,0:16:42.14:0,42,1558	0/0:8,0:8:18.95:0,19,1487	0/0:9,0:9:24.08:0,24,1349	0/0:5,0:5:12.04:0,12,645	0/0:8,0:8:24.08:0,24,1416	0/0:8,0:8:24.08:0,24,1750	0/0:16,0:15:35.99:0,36,1298	0/0:19,0:18:54.15:0,54,2626	0/0:21,0:21:51.17:0,51,1447	0/0:17,0:17:51.17:0,51,1480	0/0:6,0:6:15.05:0,15,472	0/0:6,0:5:15.01:0,15,382	0/0:8,0:8:24.08:0,24,1154	0/0:10,0:8:18.06:0,18,934	0/0:17,0:17:48.16:0,48,2576	0/0:12,0:11:33.06:0,33,1004	0/0:9,0:9:24.08:0,24,686	0/0:25,0:25:75.12:0,75,1927
chr10	87451983	.	CTTTTTT	C	3615.12	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-0.151;DP=423;FS=3.469;HRun=15;HaplotypeScore=114.0102;InbreedingCoeff=0.8367;MQ=54.11;MQ0=17;MQRankSum=-5.196;QD=21.39;ReadPosRankSum=1.865;VQSLOD=1.3332;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:21:8.98:124,9,0	0/0:3,0:6:9.62:0,10,75	0/0:43,0:9:6.32:0,6,78	0/1:35,0:11:42.65:43,0,81	0/0:24,0:27:60.10:0,60,1365	0/0:5,0:11:30.07:0,30,417	0/0:5,0:9:18.06:0,18,262	1/1:18,8:25:44.91:649,45,0	0/0:9,0:10:21.07:0,21,542	0/0:6,0:8:11.15:0,11,68	0/0:4,0:18:26.88:0,27,116	0/0:5,0:7:18.53:0,19,532	0/0:10,0:10:24.03:0,24,518	0/0:6,0:6:11.99:0,12,221	0/0:5,0:7:18.06:0,18,421	0/0:8,0:9:26.75:0,27,632	0/0:8,0:18:5.20:0,5,102	0/0:9,0:18:50.12:0,50,653	1/1:9,6:16:39.03:596,39,0	1/1:12,8:20:41.43:599,41,0	1/1:3,3:6:14.93:201,15,0	0/0:4,0:4:11.20:0,11,106	0/0:5,0:8:21.07:0,21,319	0/0:7,0:10:23.81:0,24,253	0/0:16,0:17:30.07:0,30,834	1/1:2,10:11:27.05:465,27,0	1/1:7,2:9:14.96:211,15,0	1/1:8,12:21:41.97:729,42,0
chr10	87452795	.	GACACACACAGACACACACACACAC	G	5294.66	PASS	AB=0.879;AC=20;AF=0.370;AN=54;BaseQRankSum=5.572;DP=517;FS=10.654;HRun=0;HaplotypeScore=255.6437;InbreedingCoeff=0.5176;MQ=56.90;MQ0=17;MQRankSum=-5.638;QD=25.83;ReadPosRankSum=1.894;VQSLOD=2.2478;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:69.19:0,69,5894	1/1:2,0:8:3.01:170,3,0	./.	0/0:31,0:7:8.59:0,9,153	0/0:10,0:10:27.02:0,27,2137	1/1:2,13:15:9.03:576,9,0	0/0:2,21:23:2.96:0,3,19	0/1:9,0:6:63.73:64,0,363	0/0:24,0:24:63.19:0,63,5485	0/1:2,0:30:99:1364,0,233	1/1:3,0:10:3.01:171,3,0	0/0:25,0:24:69.21:0,69,6166	0/0:17,0:17:48.16:0,48,3958	0/0:20,0:20:42.08:0,42,3223	0/0:19,0:19:39.13:0,39,2801	0/0:18,0:18:51.13:0,51,3258	1/1:11,0:14:17.90:571,18,0	1/1:2,12:15:9.03:555,9,0	0/0:13,0:12:21.16:0,21,1587	0/0:18,0:18:5.77:0,6,406	0/1:30,0:27:89.86:90,0,2641	1/1:1,1:17:16.61:720,17,0	1/1:4,13:17:12.04:768,12,0	1/1:3,20:23:4.83:197,5,0	0/0:23,0:23:54.14:0,54,4817	0/0:12,0:12:30.10:0,30,2140	0/1:17,0:17:47.72:48,0,2550	0/0:5,0:5:9.03:0,9,634
chr10	87452801	.	CACAG	C	3181.39	PASS	AC=34;AF=0.630;AN=54;BaseQRankSum=4.773;DP=527;FS=1.498;HRun=0;HaplotypeScore=121.4257;InbreedingCoeff=0.8070;MQ=53.62;MQ0=20;MQRankSum=-4.251;QD=11.20;ReadPosRankSum=-1.154;VQSLOD=2.8812;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:69.07:0,69,1312	1/1:8,0:8:3.01:31,3,0	./.	0/0:29,0:5:8.52:0,9,43	0/0:11,0:11:2.24:0,2,409	1/1:13,0:13:9.02:94,9,0	1/1:22,0:22:3:25,3,0	1/1:14,0:10:22.22:185,22,0	0/0:23,0:23:64.36:0,64,1197	1/1:29,0:29:31.92:311,32,0	1/1:9,0:9:3.01:31,3,0	0/0:26,0:25:45.40:0,45,1269	0/0:17,0:17:46.28:0,46,808	0/0:23,0:22:24.89:0,25,666	0/0:18,0:18:38.35:0,38,289	0/0:19,0:19:50.91:0,51,416	1/1:13,0:13:17.89:152,18,0	1/1:13,0:13:9.02:94,9,0	1/1:2,10:11:24.07:238,24,0	1/1:3,20:23:6.02:92,6,0	1/1:31,2:30:19.13:492,19,0	1/1:17,0:16:15.04:158,15,0	1/1:14,0:14:12.03:125,12,0	1/1:21,0:21:3.01:31,3,0	0/0:25,0:25:27.91:0,28,957	1/1:2,14:16:34.95:493,35,0	1/1:18,4:22:59.84:680,60,0	1/1:1,4:5:9.03:149,9,0
chr10	87452805	.	GAC	G	1001.41	PASS	AB=0.913;AC=33;AF=0.635;AN=52;BaseQRankSum=8.718;DP=523;FS=3.195;HRun=0;HaplotypeScore=118.7481;InbreedingCoeff=0.3970;MQ=52.03;MQ0=22;MQRankSum=-3.333;QD=3.18;ReadPosRankSum=4.309;VQSLOD=2.4076;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:39.13:0,39,588	1/1:6,0:6:2.84:14,3,0	./.	0/0:29,0:5:2.98:0,3,21	0/1:8,1:11:29.57:30,0,154	1/1:13,0:13:8.52:41,9,0	./.	0/0:14,0:10:3.42:0,3,22	0/0:23,1:24:12.08:0,12,574	1/1:29,0:29:14.14:80,14,0	1/1:8,0:8:2.84:14,3,0	0/0:27,0:27:37.95:0,38,665	0/0:18,0:18:33.09:0,33,472	0/0:20,0:20:15.98:0,16,390	1/1:8,10:18:15.04:168,15,0	1/1:7,11:18:30.09:335,30,0	1/1:12,0:12:8.52:42,9,0	1/1:13,0:13:8.52:42,9,0	0/1:13,0:10:11.75:12,0,17	1/1:22,0:22:5.31:23,5,0	0/1:32,0:29:12.59:13,0,15	1/1:17,0:16:14.20:69,14,0	1/1:14,0:14:11.36:55,11,0	1/1:21,0:21:2.84:14,3,0	0/1:18,7:25:48.15:48,0,536	0/1:15,0:15:22.15:47,0,22	1/1:23,0:23:21.40:98,21,0	1/1:5,0:5:8.10:35,8,0
chr10	87453151	.	CG	C	1550.31	PASS	AB=1.000;AC=31;AF=0.596;AN=52;BaseQRankSum=4.205;DP=275;FS=5.318;HRun=8;HaplotypeScore=39.8824;InbreedingCoeff=0.7303;MQ=64.01;MQ0=10;MQRankSum=0.497;QD=9.94;ReadPosRankSum=2.376;VQSLOD=0.9952;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:44.82:0,45,463	1/1:1,2:3:9.01:85,9,0	0/0:25,0:9:8.33:0,8,174	0/1:30,0:11:18.05:18,0,81	0/0:5,0:5:12.02:0,12,131	1/1:4,3:6:12.02:113,12,0	./.	1/1:7,4:11:1.07:153,1,0	0/0:8,0:8:18.05:0,18,207	1/1:4,4:7:8.99:86,9,0	1/1:4,3:7:6:57,6,0	0/0:15,0:15:36.09:0,36,413	0/0:5,0:5:6.02:0,6,72	0/0:12,0:12:17.91:0,18,185	0/0:9,0:9:27.07:0,27,314	0/0:8,0:8:18:0,18,164	1/1:12,4:16:26.99:242,27,0	1/1:3,7:10:18.01:170,18,0	1/1:4,3:6:12.01:116,12,0	1/1:3,2:5:9.01:87,9,0	1/1:2,12:13:18.03:174,18,0	1/1:3,2:5:6:56,6,0	1/1:6,3:9:15.01:138,15,0	1/1:2,6:8:12:108,12,0	0/0:5,0:5:6.02:0,6,72	1/1:3,5:8:12.02:116,12,0	1/1:7,1:8:2.99:29,3,0	./.
chr10	87453160	.	TG	T	1067.57	PASS	AB=1.000;AC=21;AF=0.389;AN=54;BaseQRankSum=3.764;DP=279;FS=1.477;HRun=9;HaplotypeScore=42.9228;InbreedingCoeff=0.8211;MQ=79.40;MQ0=9;MQRankSum=1.359;QD=14.43;ReadPosRankSum=1.948;VQSLOD=3.2281;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:42.53:0,43,468	1/1:2,2:4:11.99:103,12,0	0/0:35,0:13:16.34:0,16,146	0/0:35,0:18:8.42:0,8,65	0/1:5,0:5:7.84:8,0,91	1/1:4,4:8:21:185,21,0	1/1:4,0:3:8.96:73,9,0	0/0:11,0:11:20.35:0,20,163	0/0:6,0:6:18.05:0,18,207	1/1:3,9:11:18:162,18,0	1/1:0,3:3:6:54,6,0	0/0:12,0:12:26.42:0,26,265	0/0:5,0:5:12.23:0,12,107	0/0:11,0:11:8.97:0,9,162	0/0:12,0:12:30.03:0,30,327	0/0:7,0:7:21.04:0,21,229	1/1:3,9:12:21:186,21,0	1/1:2,6:8:21:188,21,0	0/0:5,0:5:3.54:0,4,56	0/0:5,0:5:11.78:0,12,102	0/0:12,0:12:17.87:0,18,127	1/1:2,2:4:8.99:75,9,0	1/1:4,3:7:14.99:130,15,0	1/1:3,4:7:12.01:107,12,0	0/0:4,0:4:11.98:0,12,123	0/0:12,0:12:26.97:0,27,271	0/0:8,0:8:15.77:0,16,131	./.
chr10	87454077	.	A	AG	4393.08	PASS	AB=0.590;AC=21;AF=0.375;AN=56;BaseQRankSum=-4.245;DP=525;FS=7.836;HRun=7;HaplotypeScore=64.3132;InbreedingCoeff=0.9278;MQ=71.65;MQ0=5;MQRankSum=1.401;QD=22.64;ReadPosRankSum=-2.026;VQSLOD=3.7155;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:60.09:0,60,577	1/1:5,3:8:21.03:215,21,0	0/0:44,0:25:26.93:0,27,242	0/0:27,0:10:3.56:0,4,56	0/0:22,0:22:59.85:0,60,531	0/0:23,0:23:56.96:0,57,528	0/0:14,0:14:39.01:0,39,359	1/1:6,11:17:30.05:322,30,0	0/0:14,0:14:37.32:0,37,310	1/1:4,20:24:40.77:606,41,0	1/1:3,12:16:30.03:328,30,0	0/0:13,0:13:38.89:0,39,346	0/0:17,0:17:42.05:0,42,398	0/0:10,0:10:23.95:0,24,217	0/0:16,0:16:41.95:0,42,385	0/0:20,0:20:51:0,51,458	1/1:8,18:26:72.09:787,72,0	0/0:22,0:22:28.26:0,28,430	0/1:7,16:22:0.03:464,0,0	1/1:5,15:20:32.84:330,33,0	1/1:6,2:8:9.49:106,9,0	0/0:11,0:11:30.04:0,30,289	0/0:17,0:17:41.86:0,42,367	0/0:19,0:19:45.02:0,45,421	0/0:15,0:15:39.05:0,39,372	1/1:6,16:23:45.09:498,45,0	1/1:1,16:17:48.14:562,48,0	1/1:1,9:10:15.04:177,15,0
chr10	87454167	.	CAAAA	C	4572.77	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=2.969;DP=513;FS=3.061;HRun=15;HaplotypeScore=94.2395;InbreedingCoeff=0.9019;MQ=63.89;MQ0=3;MQRankSum=-3.134;QD=21.27;ReadPosRankSum=1.016;VQSLOD=4.0729;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:34:45.03:0,45,819	1/1:2,8:10:24.02:321,24,0	0/0:40,0:13:16.86:0,17,381	0/1:27,0:9:7.60:8,0,190	0/0:14,0:17:48.16:0,48,978	0/0:5,0:18:44.96:0,45,603	0/0:2,0:12:18.06:0,18,223	1/1:11,11:22:29.74:387,30,0	0/0:11,0:11:27.07:0,27,500	1/1:12,5:17:34.78:388,35,0	1/1:3,16:19:11.02:419,11,0	0/0:8,0:8:21.07:0,21,452	0/0:13,0:13:33.11:0,33,665	0/0:8,0:8:17.41:0,17,265	0/0:13,0:13:30.10:0,30,691	0/0:16,0:16:29.84:0,30,634	1/1:5,27:32:59.75:800,60,0	0/0:13,1:25:23.42:0,23,730	1/1:9,7:16:29.68:360,30,0	1/1:11,6:17:4.43:306,4,0	1/1:1,17:18:33.07:425,33,0	0/0:10,0:20:54.07:0,54,693	0/0:5,0:18:51.16:0,51,660	0/0:7,0:20:51.14:0,51,646	0/0:18,0:22:48.14:0,48,908	1/1:1,13:14:35.86:443,36,0	1/1:4,10:14:39.05:486,39,0	1/1:5,3:8:12.49:229,12,0
chr10	87454245	.	GAGAAC	G	5245.56	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=2.017;DP=618;FS=0.904;HRun=0;HaplotypeScore=137.4373;InbreedingCoeff=0.9991;MQ=80.30;MQ0=0;MQRankSum=-3.178;QD=43.00;ReadPosRankSum=1.549;VQSLOD=4.8834;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:96.33:0,96,2969	0/0:8,0:8:24.08:0,24,655	0/0:17,0:17:42.12:0,42,1084	0/0:20,0:20:45.29:0,45,986	0/0:25,0:25:72.25:0,72,2184	1/1:0,21:21:54.14:1090,54,0	1/1:2,28:26:48.16:932,48,0	0/0:19,0:19:54.17:0,54,1529	0/0:24,0:24:72.25:0,72,2227	0/0:28,0:28:78.27:0,78,2384	0/0:21,0:21:54.19:0,54,1578	0/0:20,0:20:57.20:0,57,1764	0/0:20,0:20:57.20:0,57,1764	0/0:19,0:19:57.20:0,57,1736	0/0:24,0:24:72.25:0,72,2211	0/0:22,0:22:60.21:0,60,1842	0/0:48,0:48:99:0,126,3705	1/1:6,9:15:27.09:548,27,0	0/0:23,0:23:69.24:0,69,2059	0/0:19,0:19:48.16:0,48,1418	0/0:25,0:25:69.24:0,69,2073	1/1:1,11:12:27.09:567,27,0	1/1:3,13:17:38.84:791,39,0	1/1:2,25:27:63.22:1318,63,0	0/0:20,0:20:57.20:0,57,1723	0/0:25,0:25:69.24:0,69,2095	0/0:17,0:17:48.16:0,48,1482	0/0:11,0:11:33.11:0,33,1023
chr10	87454981	.	TCAAAAAAAAAAAAAAAGAA	T	66.79	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.378;DP=303;FS=4.437;HRun=0;HaplotypeScore=124.2009;InbreedingCoeff=0.2961;MQ=48.88;MQ0=17;MQRankSum=-1.405;QD=5.57;ReadPosRankSum=0.423;VQSLOD=2.0177;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:36.58:0,37,1723	0/0:3,0:3:6.02:0,6,349	0/0:14,0:5:15.05:0,15,390	0/0:15,0:4:6.01:0,6,90	0/0:13,0:12:9.03:0,9,579	0/0:7,0:6:15.05:0,15,730	0/0:8,0:8:12.04:0,12,558	0/0:21,0:12:15.05:0,15,484	0/0:8,0:8:14.98:0,15,723	0/0:13,0:13:15.52:0,16,780	0/0:10,0:9:6.02:0,6,121	0/0:14,0:14:24.08:0,24,1138	0/0:5,0:5:9.02:0,9,336	0/0:10,0:10:18.06:0,18,960	0/0:13,0:13:27.09:0,27,1625	0/0:8,0:8:12.04:0,12,781	0/0:14,0:13:14.28:0,14,502	0/0:9,0:9:18.06:0,18,832	0/0:8,0:7:8.61:0,9,190	1/1:8,4:12:3.01:144,3,0	0/0:6,0:6:3.01:0,3,184	0/0:11,0:11:9.03:0,9,345	0/0:12,0:11:8.98:0,9,223	0/0:6,0:6:9.03:0,9,459	0/0:6,0:6:15.05:0,15,938	0/0:8,0:8:24.08:0,24,1096	0/0:13,0:12:18.06:0,18,900	0/0:7,0:6:6.01:0,6,180
chr10	87455001	.	C	CA	1173.44	PASS	AB=0.861;AC=18;AF=0.321;AN=56;BaseQRankSum=-2.994;DP=421;FS=7.413;HRun=15;HaplotypeScore=64.4713;InbreedingCoeff=0.0539;MQ=54.16;MQ0=22;MQRankSum=0.920;QD=4.58;ReadPosRankSum=-3.599;VQSLOD=0.5287;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,5:30:3.29:163,0,3	0/1:6,0:7:18.36:31,0,18	0/0:29,1:10:0.62:0,1,39	0/1:23,0:6:8.29:16,0,8	0/1:11,3:14:27.84:28,0,84	0/0:5,0:10:5.66:0,6,16	0/0:5,0:10:5.26:0,5,15	0/1:33,5:30:33.09:144,0,33	0/1:8,0:8:10.06:10,0,14	0/1:7,5:11:27.26:80,0,27	0/1:14,1:14:20.82:60,0,21	0/0:14,0:14:9.64:0,10,53	0/0:5,0:5:3.84:0,4,12	0/0:14,0:11:9.45:0,9,27	0/0:14,0:14:8.73:0,9,74	0/0:7,0:7:8.54:0,9,52	1/1:30,1:28:18.97:194,19,0	0/0:15,0:18:7.18:0,7,20	0/1:19,3:20:10.06:212,0,10	0/0:4,0:4:2.16:0,2,7	1/1:4,4:8:5.76:50,6,0	0/0:4,0:9:10.62:0,11,30	0/0:3,0:8:5.56:0,6,15	0/0:3,0:6:4.06:0,4,12	0/0:14,0:13:11.84:0,12,130	1/1:10,4:14:0.10:100,0,0	1/1:22,1:21:10.81:158,11,0	0/1:5,3:7:3.03:85,0,3
chr10	87455183	.	C	CT	2007.73	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-10.344;DP=506;FS=13.135;HRun=8;HaplotypeScore=66.6458;InbreedingCoeff=0.8239;MQ=65.67;MQ0=3;MQRankSum=1.137;QD=19.12;ReadPosRankSum=-1.583;VQSLOD=2.0667;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,900	0/0:4,0:4:11.08:0,11,50	0/0:15,0:10:3:0,3,113	0/0:10,0:7:11.16:0,11,123	0/0:22,0:22:26.45:0,26,409	1/1:0,19:19:45.13:519,45,0	1/1:2,10:12:24.07:277,24,0	0/0:38,0:33:69.81:0,70,294	0/0:11,0:11:30:0,30,270	0/0:15,0:15:33.25:0,33,124	0/0:18,0:18:25.86:0,26,220	0/0:18,0:18:45:0,45,407	0/0:18,0:18:51.02:0,51,467	0/0:11,0:10:30.02:0,30,274	0/0:10,0:10:27.01:0,27,247	0/0:12,0:12:32.22:0,32,276	0/0:37,0:37:65.50:0,66,390	1/1:2,17:19:48.14:554,48,0	0/0:26,0:24:41.07:0,41,179	0/0:16,0:16:45.11:0,45,216	0/0:9,0:9:22.35:0,22,102	1/1:1,5:6:15.04:173,15,0	1/1:2,12:14:36.11:415,36,0	1/1:0,10:10:18.05:208,18,0	0/0:17,1:18:48:0,48,431	0/0:27,0:27:31.26:0,31,215	0/0:27,0:27:4.09:0,4,229	0/1:25,0:25:48.20:48,0,203
chr10	87455397	.	C	CTT	3694.03	PASS	AB=0.682;AC=29;AF=0.518;AN=56;BaseQRankSum=4.417;DP=579;FS=5.845;HRun=12;HaplotypeScore=89.1088;InbreedingCoeff=0.6218;MQ=67.75;MQ0=0;MQRankSum=-1.473;QD=10.74;ReadPosRankSum=-2.245;VQSLOD=1.9338;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:35:71.42:0,71,634	1/1:1,0:4:7.49:26,7,0	0/0:8,0:9:17.36:0,17,122	0/0:11,0:12:9.62:0,10,138	0/0:16,0:18:26.73:0,27,344	1/1:2,23:28:59.67:777,60,0	1/1:7,21:32:58.99:689,59,0	1/1:12,0:29:16.14:137,16,0	0/0:23,0:23:26.57:0,27,415	0/1:7,0:16:4.43:61,0,4	1/1:5,0:14:20.72:71,21,0	0/0:30,0:31:43.70:0,44,569	0/0:22,0:22:20.59:0,21,358	0/0:24,0:26:62.35:0,62,545	0/0:19,0:21:50.39:0,50,440	0/0:17,0:19:32.45:0,32,383	0/1:12,0:24:60.12:125,0,60	1/1:5,10:15:24.01:312,24,0	0/1:20,0:33:40.97:103,0,41	1/1:4,0:17:0.19:59,0,0	0/1:15,0:22:3.79:94,0,4	1/1:1,6:7:15.05:210,15,0	1/1:2,8:11:18.06:252,18,0	1/1:3,21:27:40.60:489,41,0	0/0:18,0:18:37.53:0,38,406	0/1:11,0:27:7.35:157,0,7	1/1:11,0:33:11.90:98,12,0	1/1:0,0:5:9.98:35,10,0
chr10	87455552	.	C	CTGCT	5209.95	PASS	AB=0.794;AC=20;AF=0.400;AN=50;BaseQRankSum=-8.015;DP=746;FS=10.484;HRun=0;HaplotypeScore=126.8215;InbreedingCoeff=0.7321;MQ=67.52;MQ0=2;MQRankSum=-1.223;QD=17.42;ReadPosRankSum=-2.816;VQSLOD=3.6093;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:42.12:0,42,619	0/1:3,7:10:30.96:210,0,31	./.	./.	0/0:33,0:33:30.08:0,30,437	0/0:13,0:28:29.16:0,29,253	0/0:17,0:25:18.02:0,18,166	./.	0/0:24,0:24:33.11:0,33,503	1/1:22,8:33:0.48:385,0,0	1/1:14,11:25:26.96:526,27,0	0/0:31,0:31:48.16:0,48,730	0/0:27,0:27:33.11:0,33,502	0/0:29,0:29:60.14:0,60,857	0/0:32,0:32:51.17:0,51,778	0/0:27,0:27:42.12:0,42,620	1/1:24,25:48:14.33:1267,14,0	0/1:17,0:23:29.38:29,0,182	1/1:18,2:19:6.02:139,6,0	1/1:17,9:28:29.96:548,30,0	1/1:26,19:45:45.15:1024,45,0	0/0:13,0:19:11.80:0,12,111	0/0:13,0:24:15.41:0,15,212	0/0:16,0:34:54.05:0,54,500	0/0:17,0:17:24:0,24,337	1/1:17,1:22:24.02:341,24,0	1/1:9,11:21:30.10:689,30,0	1/1:22,0:22:3.01:52,3,0
chr10	87458045	.	C	CT	2008.20	PASS	AB=0.962;AC=10;AF=0.179;AN=56;BaseQRankSum=-8.553;DP=592;FS=0.973;HRun=9;HaplotypeScore=56.5474;InbreedingCoeff=0.8091;MQ=80.77;MQ0=0;MQRankSum=-0.689;QD=15.81;ReadPosRankSum=-1.147;VQSLOD=3.4389;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:41.99:0,42,365	1/1:1,10:11:30.08:332,30,0	0/0:16,0:18:37.03:0,37,298	0/1:13,0:13:3.28:3,0,149	0/0:30,0:30:80.96:0,81,700	0/0:23,0:23:53.27:0,53,468	0/0:14,0:14:35.99:0,36,313	0/0:27,0:27:62.90:0,63,544	0/0:11,0:11:32.99:0,33,286	1/1:5,20:24:31.08:562,31,0	1/1:5,23:28:31.10:571,31,0	0/0:21,0:21:37.44:0,37,472	0/0:20,0:20:53.98:0,54,469	0/0:14,0:14:35.98:0,36,313	0/0:34,0:34:98.98:0,99,859	0/0:21,0:21:53.99:0,54,469	1/1:3,23:26:63.17:697,63,0	0/0:13,0:13:35.99:0,36,312	0/0:13,0:13:23.94:0,24,203	0/0:37,0:37:92.95:0,93,807	0/0:11,0:11:26.98:0,27,234	0/0:29,0:29:77.95:0,78,677	0/0:21,1:23:28.83:0,29,468	0/1:22,2:24:6.38:6,0,409	0/0:23,0:23:59.96:0,60,518	0/0:26,1:27:29.79:0,30,485	0/0:29,0:29:86.93:0,87,745	0/0:13,0:12:38.99:0,39,338
chr10	87461880	.	GGA	G	4916.01	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.082;DP=710;FS=13.202;HRun=0;HaplotypeScore=102.9456;InbreedingCoeff=0.9326;MQ=82.43;MQ0=4;MQRankSum=-2.377;QD=30.53;ReadPosRankSum=3.202;VQSLOD=6.0806;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,2101	0/0:7,0:7:18.06:0,18,306	0/0:32,0:30:61:0,61,1062	0/0:39,0:34:48.82:0,49,1140	0/0:16,0:16:45.15:0,45,751	1/1:1,19:20:54.18:702,54,0	1/1:6,20:26:51.16:663,51,0	0/0:38,0:38:87.30:0,87,1480	0/0:30,0:30:78.74:0,79,1321	0/0:21,0:21:60.21:0,60,1010	0/0:14,0:14:36.12:0,36,612	0/0:32,0:32:90.31:0,90,1513	0/0:18,0:18:48.16:0,48,816	0/0:30,0:30:81.28:0,81,1378	0/0:18,0:18:45.14:0,45,739	0/0:23,0:23:69.24:0,69,1168	0/0:35,0:35:93.32:0,93,1575	1/1:4,26:30:78.25:1014,78,0	0/0:24,0:24:63.22:0,63,1072	0/0:15,0:15:0.97:0,1,574	0/0:54,0:54:99:0,153,2536	1/1:5,19:23:45.15:585,45,0	1/1:0,16:16:36.12:468,36,0	1/1:3,42:45:99:1483,114,0	0/0:16,0:16:48.16:0,48,817	0/0:22,0:22:63.19:0,63,1011	0/0:20,0:20:54.18:0,54,918	0/0:2,0:2:6.02:0,6,99
chr10	87462487	.	CCCCTGT	C	160.28	PASS	AB=0.833;AC=3;AF=0.054;AN=56;BaseQRankSum=3.962;DP=299;FS=11.604;HRun=0;HaplotypeScore=70.9929;InbreedingCoeff=-0.0796;MQ=63.69;MQ0=1;MQRankSum=-3.847;QD=5.17;ReadPosRankSum=1.661;VQSLOD=-0.1140;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:48.16:0,48,1549	0/0:2,0:2:3.01:0,3,112	0/1:12,0:7:12.01:12,0,276	0/0:12,0:8:24.05:0,24,432	0/0:4,0:4:12.04:0,12,309	0/0:8,0:7:11.98:0,12,292	0/0:22,0:22:39.13:0,39,1357	0/0:10,0:10:30.10:0,30,696	0/0:16,0:15:41.73:0,42,1197	0/0:6,0:6:18.05:0,18,351	0/0:3,0:3:6.01:0,6,138	0/0:16,0:16:48.14:0,48,1503	0/0:8,0:8:24.08:0,24,813	0/0:13,0:12:36.12:0,36,1168	0/0:9,0:9:27.09:0,27,883	0/0:10,0:10:30.10:0,30,921	0/0:12,3:15:29.71:0,30,837	0/1:4,3:7:99:188,0,267	0/0:12,0:12:36.11:0,36,911	0/0:3,0:3:9.03:0,9,275	0/0:43,0:40:99:0,114,3375	0/0:4,0:4:5.67:0,6,47	0/0:4,0:4:9.03:0,9,309	0/1:9,3:12:57.50:57,0,228	0/0:10,0:10:27.09:0,27,874	0/0:5,0:5:12.04:0,12,379	0/0:8,0:8:24.08:0,24,878	0/0:7,0:7:21.07:0,21,583
chr10	87462495	.	CCCCTGA	C	125	PASS	AB=0.887;AC=5;AF=0.089;AN=56;BaseQRankSum=4.033;DP=285;FS=13.352;HRun=0;HaplotypeScore=68.4905;InbreedingCoeff=-0.0043;MQ=64.48;MQ0=3;MQRankSum=-3.415;QD=2.91;ReadPosRankSum=1.310;VQSLOD=0.4362;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:39.13:0,39,1150	0/0:1,0:1:3.01:0,3,102	0/1:13,0:8:13.42:13,0,240	0/1:12,0:7:11.68:12,0,64	0/0:4,0:4:9.03:0,9,299	0/0:6,0:5:9.03:0,9,287	0/0:23,0:23:30.10:0,30,945	0/0:7,0:7:12.04:0,12,297	0/0:15,0:15:33.07:0,33,936	0/0:6,0:6:12.04:0,12,330	0/0:1,0:1:3.01:0,3,83	0/0:17,0:17:45.14:0,45,1263	0/0:7,0:7:15.05:0,15,490	0/0:11,0:11:30.10:0,30,889	0/0:12,0:12:30.10:0,30,916	0/0:9,0:9:21.07:0,21,684	0/0:11,3:14:24.07:0,24,642	0/1:3,3:6:99:159,0,249	0/0:13,0:11:24.08:0,24,664	0/0:7,0:7:12.04:0,12,329	0/0:42,0:41:88.55:0,89,2667	0/1:2,0:2:0:0,0,0	0/0:4,0:4:9.03:0,9,284	0/1:7,3:10:44.90:45,0,192	0/0:7,0:7:18.06:0,18,536	0/0:8,0:8:15.05:0,15,462	0/0:7,0:7:18.06:0,18,592	0/0:4,0:4:12.03:0,12,332
chr10	87462529	.	CCCCTGA	C	1434.86	PASS	AC=18;AF=0.333;AN=54;BaseQRankSum=6.252;DP=334;FS=0.845;HRun=0;HaplotypeScore=65.8780;InbreedingCoeff=0.8028;MQ=58.42;MQ0=5;MQRankSum=-6.441;QD=16.12;ReadPosRankSum=-0.003;VQSLOD=2.6217;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:18:45.15:0,45,1531	./.	0/0:11,0:5:12.03:0,12,307	0/0:14,0:5:9.03:0,9,231	0/0:6,0:6:15.05:0,15,510	1/1:10,0:9:3.01:37,3,0	1/1:28,0:28:3.90:40,4,0	0/0:7,0:6:13.29:0,13,458	0/0:15,0:14:33.11:0,33,1018	1/1:1,7:8:24.08:490,24,0	1/1:0,2:2:3.01:66,3,0	0/0:15,0:15:39.13:0,39,1241	0/0:10,0:10:27.09:0,27,892	0/0:15,0:14:36.12:0,36,1125	0/0:16,0:16:39.13:0,39,1257	0/0:12,0:12:33.11:0,33,1048	1/1:13,2:15:15.52:331,16,0	1/1:9,0:9:3.01:102,3,0	0/0:9,0:7:18.06:0,18,518	0/0:7,0:7:18.06:0,18,574	0/0:57,1:54:99:0,141,4244	1/1:0,3:3:9.03:179,9,0	1/1:0,4:4:6.02:112,6,0	1/1:10,0:10:12.01:260,12,0	0/0:8,0:8:21.07:0,21,712	0/0:12,0:12:32.90:0,33,930	0/0:5,0:5:6.02:0,6,165	0/0:3,0:3:9.03:0,9,188
chr10	87462535	.	A	ACCCTGCAC	2256.17	PASS	AC=18;AF=0.333;AN=54;BaseQRankSum=2.707;DP=365;FS=1.684;HRun=0;HaplotypeScore=88.0794;InbreedingCoeff=0.8295;MQ=57.62;MQ0=6;MQRankSum=-7.353;QD=21.90;ReadPosRankSum=-1.800;VQSLOD=2.6269;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:19:45.15:0,45,1246	./.	0/0:12,0:5:12.04:0,12,296	0/0:13,0:5:8.99:0,9,231	0/0:8,0:8:18.04:0,18,438	1/1:2,7:9:3.01:131,3,0	1/1:7,25:35:8.25:326,8,0	0/0:7,0:6:13.30:0,13,412	0/0:15,0:14:33.11:0,33,883	1/1:11,0:11:33.11:686,33,0	1/1:3,0:2:3.01:66,3,0	0/0:15,0:15:39.13:0,39,1059	0/0:11,0:11:27.09:0,27,744	0/0:18,0:17:16.22:0,16,953	0/0:15,0:15:42.14:0,42,1129	0/0:13,0:13:36.11:0,36,921	1/1:6,8:17:17.80:478,18,0	1/1:4,4:8:3.01:90,3,0	0/0:10,0:9:18.06:0,18,469	0/0:8,0:8:18.06:0,18,499	0/0:61,0:57:99:0,153,3740	1/1:3,0:3:9.03:179,9,0	1/1:4,0:4:6.02:112,6,0	1/1:2,8:12:12.04:372,12,0	0/0:8,0:8:21.07:0,21,582	0/0:14,0:14:34.86:0,35,874	0/0:6,0:6:12.04:0,12,291	0/0:3,0:3:9.03:0,9,188
chr10	87464840	.	GGT	G	1273.23	PASS	AB=0.906;AC=33;AF=0.660;AN=50;BaseQRankSum=3.818;DP=551;FS=8.553;HRun=0;HaplotypeScore=79.6760;InbreedingCoeff=-0.1347;MQ=67.52;MQ0=16;MQRankSum=2.521;QD=3.10;ReadPosRankSum=0.388;VQSLOD=0.6343;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,1:27:14.58:112,15,0	1/1:5,0:7:5.68:28,6,0	./.	./.	0/1:16,0:16:27.03:27,0,98	1/1:14,0:14:3.01:32,3,0	0/1:28,0:28:69.16:101,0,69	./.	0/1:13,1:14:14.05:14,0,178	1/1:18,0:22:5.34:23,5,0	1/1:8,0:11:2.84:14,3,0	0/1:13,1:14:23.04:23,0,79	0/1:14,0:14:20.15:20,0,84	0/1:13,0:14:25.65:26,0,76	0/0:19,0:19:15.04:0,15,203	0/0:16,0:16:6:0,6,67	1/1:22,0:25:2.84:14,3,0	0/1:17,7:25:1.12:297,0,1	0/1:12,2:14:28.69:55,0,29	1/1:17,3:19:11.39:104,11,0	1/1:35,1:35:8.48:142,8,0	0/1:12,6:18:4.48:84,0,4	0/1:13,5:17:16.79:26,0,17	1/1:17,5:24:20.72:188,21,0	0/0:20,0:21:2.52:0,3,204	0/1:20,0:19:18.80:25,0,19	1/1:9,3:11:3:32,3,0	1/1:12,2:14:3.01:32,3,0
chr10	87466906	.	TTGGA	T	2050.04	PASS	AB=1.000;AC=19;AF=0.396;AN=48;BaseQRankSum=0.731;DP=887;FS=13.687;HRun=0;HaplotypeScore=170.6064;InbreedingCoeff=0.7408;MQ=57.62;MQ0=12;MQRankSum=4.305;QD=6.55;ReadPosRankSum=2.746;VQSLOD=1.9582;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:51,15:65:54.13:814,54,0	0/0:6,0:6:7.59:0,8,28	./.	./.	0/0:22,0:21:15.03:0,15,298	0/0:23,0:22:16.84:0,17,144	0/0:37,0:35:7.41:0,7,73	./.	0/0:40,0:37:33.11:0,33,761	0/0:35,0:29:15.02:0,15,57	0/1:18,0:14:4.46:4,0,11	0/0:41,0:37:36.10:0,36,741	0/0:41,0:41:27.09:0,27,595	0/0:35,0:34:18.06:0,18,392	0/0:38,0:36:33.09:0,33,676	0/0:44,0:40:33.11:0,33,716	./.	1/1:26,0:27:2.16:40,2,0	1/1:25,4:26:15.02:202,15,0	1/1:25,1:26:2.97:45,3,0	1/1:58,11:66:45.05:629,45,0	0/0:24,0:20:4.56:0,5,33	1/1:22,0:19:5.75:41,6,0	0/0:46,0:46:8.18:0,8,140	0/0:28,0:29:12.92:0,13,188	1/1:25,3:28:12.04:181,12,0	1/1:18,4:20:13.28:224,13,0	1/1:6,0:6:3.01:45,3,0
chr10	87466935	.	TG	T	933.05	PASS	AB=0.864;AC=8;AF=0.143;AN=56;BaseQRankSum=6.715;DP=956;FS=24.221;HRun=2;HaplotypeScore=139.4738;InbreedingCoeff=0.6920;MQ=42.85;MQ0=103;MQRankSum=-6.937;QD=10.03;ReadPosRankSum=-0.716;VQSLOD=0.1226;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:55:99:0,100,1209	1/1:1,3:4:7.80:114,8,0	0/0:27,1:9:16.56:0,17,220	0/0:33,0:11:21.27:0,21,265	0/0:19,0:15:36.11:0,36,510	0/0:21,0:19:45.15:0,45,646	0/0:42,1:29:56.98:0,57,825	0/0:31,0:13:33.10:0,33,456	0/0:44,0:36:99:0,102,1467	1/1:8,16:18:22.91:526,23,0	1/1:2,11:11:21.45:167,21,0	0/0:47,0:39:99:0,108,1544	0/0:42,0:40:90.73:0,91,1260	0/0:45,1:39:99:0,105,1430	0/0:44,1:37:85.32:0,85,1357	0/0:49,0:41:99:0,108,1508	0/1:15,9:18:99:265,0,170	0/0:30,0:24:44.38:0,44,668	0/0:32,0:22:49.48:0,49,552	0/0:36,1:29:67.71:0,68,910	0/0:100,0:81:99:0,136,1680	0/0:15,0:13:24.07:0,24,329	0/0:18,0:15:26.98:0,27,363	0/0:44,0:43:54.09:0,54,1180	0/0:30,0:26:63.16:0,63,825	0/0:33,0:24:16.10:0,16,655	0/1:28,0:24:6.03:6,0,537	0/0:13,0:7:13.60:0,14,178
chr10	87466951	.	TG	T	227.21	PASS	AB=0.787;AC=2;AF=0.036;AN=56;BaseQRankSum=5.514;DP=971;FS=1.059;HRun=2;HaplotypeScore=149.4211;InbreedingCoeff=0.1029;MQ=38.19;MQ0=130;MQRankSum=-4.772;QD=6.14;ReadPosRankSum=1.128;VQSLOD=0.7238;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:65,1:56:99:0,101,1066	0/1:6,3:7:44.07:122,0,44	0/0:39,1:3:3.48:0,3,42	0/0:49,4:6:8.68:0,9,154	0/0:16,0:11:30.06:0,30,415	0/0:23,0:20:35.32:0,35,276	0/0:40,2:22:16.49:0,16,370	0/0:36,0:13:36.06:0,36,452	0/0:46,0:36:92.90:0,93,1239	0/1:22,6:19:99:193,0,326	0/0:5,2:3:0.47:0,0,1	0/0:48,0:41:96.27:0,96,1341	0/0:37,0:33:72.71:0,73,1038	0/0:47,0:40:87.48:0,87,1228	0/0:43,1:37:86.88:0,87,1213	0/0:51,0:44:99:0,111,1525	0/0:28,2:24:41.87:0,42,495	0/0:29,0:22:4.59:0,5,502	0/0:28,0:21:49.87:0,50,572	0/0:32,1:22:43.56:0,44,536	0/0:97,0:74:99:0,124,1475	0/0:15,1:14:17.90:0,18,181	0/0:17,0:14:26.64:0,27,256	0/0:30,0:29:56.88:0,57,622	0/0:26,0:21:49.29:0,49,578	0/0:28,0:16:36.16:0,36,349	0/0:32,0:23:23.56:0,24,434	0/0:12,0:5:7.58:0,8,89
chr10	87466953	.	G	GATA	1738.56	PASS	AB=0.864;AC=6;AF=0.107;AN=56;BaseQRankSum=1.885;DP=987;FS=0.000;HRun=0;HaplotypeScore=171.4544;InbreedingCoeff=-0.0985;MQ=37.56;MQ0=140;MQRankSum=-0.551;QD=11.36;ReadPosRankSum=-0.246;VQSLOD=3.2496;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:69,0:58:99:0,130,1698	0/0:9,0:7:10.39:0,10,70	0/0:44,0:3:3.01:0,3,49	0/0:56,0:6:9.15:0,9,173	0/0:16,0:11:27.09:0,27,458	0/1:17,5:19:67.43:451,0,67	0/1:39,2:21:99:335,0,136	0/0:38,0:13:33:0,33,445	0/0:49,0:38:94.16:0,94,1499	0/0:29,0:19:47.24:0,47,493	0/0:8,0:3:1.64:0,2,5	0/0:50,0:43:99:0,102,1605	0/0:38,0:34:75.18:0,75,1206	0/0:44,0:37:93.57:0,94,1387	0/0:43,0:36:87.28:0,87,1415	0/0:52,0:45:99:0,108,1745	0/0:29,0:23:41.50:0,41,569	0/1:30,0:23:37.88:38,0,431	0/0:29,0:20:54.15:0,54,744	0/0:32,0:20:42.04:0,42,592	0/0:97,0:73:99:0,141,1988	0/1:13,2:13:65.74:156,0,66	0/1:10,6:13:34.72:288,0,35	0/1:22,7:28:99:594,0,215	0/0:26,0:21:37.53:0,38,511	0/0:32,0:17:45.07:0,45,544	0/0:32,0:23:48.09:0,48,634	0/0:12,0:5:9.03:0,9,132
chr10	87467022	.	GGAT	G	666.58	PASS	AB=0.988;AC=15;AF=0.268;AN=56;BaseQRankSum=6.192;DP=937;FS=21.714;HRun=0;HaplotypeScore=141.0171;InbreedingCoeff=-0.0888;MQ=33.84;MQ0=215;MQRankSum=-2.183;QD=1.76;ReadPosRankSum=-2.219;VQSLOD=0.9081;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:37:30.12:0,30,1018	0/1:14,0:12:52.88:129,0,53	0/0:8,0:1:3.01:0,3,38	0/0:15,0:1:3.01:0,3,39	0/0:30,0:12:21.07:0,21,352	0/1:21,0:18:21.09:21,0,111	0/0:32,0:17:7.70:0,8,83	0/0:46,0:7:8.96:0,9,87	0/0:44,0:35:59.38:0,59,1307	0/1:40,0:21:40.80:41,0,494	1/1:12,0:6:5.68:63,6,0	0/0:51,0:47:99:0,105,1691	0/0:43,0:35:67:0,67,1264	0/0:50,0:43:88.25:0,88,1646	0/0:47,0:31:75.25:0,75,1213	0/0:58,0:50:99:0,123,1777	0/1:21,0:15:44:44,0,178	0/1:22,0:13:98.05:98,0,164	0/1:38,1:16:79.04:79,0,96	1/1:21,2:15:4:23,4,0	0/1:89,2:55:91.56:173,0,92	0/0:27,0:21:24.79:0,25,169	0/0:8,0:4:5.52:0,6,25	0/1:16,0:10:24.14:24,0,78	0/0:34,0:22:45.15:0,45,796	0/1:43,1:20:99:118,0,191	0/1:23,0:14:3.82:4,0,259	0/1:10,0:6:1.34:1,0,26
chr10	87467041	.	GGATGGATA	G	982.62	PASS	AB=0.924;AC=7;AF=0.125;AN=56;BaseQRankSum=6.658;DP=921;FS=6.328;HRun=0;HaplotypeScore=165.2388;InbreedingCoeff=0.1429;MQ=31.60;MQ0=267;MQRankSum=-5.896;QD=8.47;ReadPosRankSum=-1.380;VQSLOD=2.1768;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:27:47.55:0,48,1245	1/1:8,6:12:13.22:503,13,0	0/0:31,0:1:3.01:0,3,64	0/0:32,0:1:3.01:0,3,82	0/0:23,0:10:18.06:0,18,568	0/0:20,0:15:24.04:0,24,453	0/1:28,0:14:28.88:29,0,96	0/0:37,0:4:11.98:0,12,138	0/0:44,0:36:69.09:0,69,2075	0/1:27,4:15:99:306,0,183	0/1:9,2:7:7.50:81,0,7	0/0:50,0:45:90.17:0,90,2898	0/0:44,0:32:69.24:0,69,2226	0/0:55,0:43:92.88:0,93,2898	0/0:50,0:33:72.11:0,72,1984	0/0:57,0:42:89.96:0,90,2805	0/1:14,2:8:61.15:165,0,61	0/0:20,0:13:29.97:0,30,443	0/0:27,0:13:28.43:0,28,337	0/0:25,0:16:5.27:0,5,69	0/0:93,0:48:64.89:0,65,1076	0/0:23,0:20:35.90:0,36,522	0/0:10,0:7:8.90:0,9,86	0/0:17,0:10:14.96:0,15,221	0/0:34,0:23:36.08:0,36,1078	0/0:36,0:18:50.62:0,51,605	0/0:25,0:19:35.52:0,36,516	0/1:16,0:5:31.13:31,0,142
chr10	87467048	.	TAATG	T	241.14	PASS	AB=0.984;AC=6;AF=0.107;AN=56;BaseQRankSum=7.752;DP=842;FS=17.474;HRun=0;HaplotypeScore=126.1649;InbreedingCoeff=0.2839;MQ=31.05;MQ0=266;MQRankSum=-6.227;QD=2.98;ReadPosRankSum=-0.086;VQSLOD=1.2502;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:24:29.36:0,29,397	1/1:10,1:10:8.09:133,8,0	0/0:34,0:1:2.98:0,3,21	0/0:38,0:1:2.98:0,3,22	0/0:21,0:10:15.03:0,15,314	0/0:20,0:15:29.10:0,29,318	0/0:20,0:8:6.02:0,6,137	0/0:33,0:4:12.04:0,12,339	0/0:45,0:38:65.40:0,65,1341	0/1:28,2:17:28.88:173,0,29	0/1:11,0:8:0.49:0,0,12	0/0:45,0:39:78.16:0,78,1780	0/0:46,0:31:62.35:0,62,1356	0/0:47,0:38:81.21:0,81,2042	0/0:40,1:26:57.17:0,57,1341	0/0:51,0:36:81.27:0,81,2120	0/1:13,0:5:1.51:37,0,2	0/0:19,0:12:26.94:0,27,493	0/0:23,0:11:24.04:0,24,428	0/0:20,0:13:11.93:0,12,124	0/0:84,1:46:38.03:0,38,901	0/0:22,0:18:31.57:0,32,354	0/0:11,0:8:8.72:0,9,106	0/0:18,0:11:9.53:0,10,185	0/0:26,0:19:21.07:0,21,591	0/0:30,0:17:48.11:0,48,940	0/0:20,0:15:21.43:0,21,332	0/1:16,0:4:10.99:11,0,96
chr10	87467113	.	TGATGGATG	T	1811.94	PASS	AB=0.942;AC=15;AF=0.313;AN=48;BaseQRankSum=3.046;DP=975;FS=47.962;HRun=0;HaplotypeScore=120.7818;InbreedingCoeff=-0.1324;MQ=18.85;MQ0=415;MQRankSum=2.596;QD=3.85;ReadPosRankSum=-0.496;VQSLOD=0.4726;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:14:15.05:0,15,325	1/1:18,1:15:13.02:159,13,0	./.	./.	./.	0/1:11,2:9:2.95:253,0,3	0/1:14,0:6:13.99:33,0,14	0/0:63,0:6:12.04:0,12,330	0/1:53,0:31:5.40:5,0,428	0/1:59,3:38:99:575,0,1727	0/1:30,3:24:99:129,0,115	0/0:43,0:20:6.01:0,6,149	0/0:50,0:22:11.61:0,12,352	0/0:42,0:21:12.03:0,12,288	0/0:44,0:20:5.23:0,5,312	0/0:52,0:29:33.10:0,33,966	0/1:11,1:5:22.57:23,0,153	0/1:7,2:5:12.17:229,0,12	0/0:30,0:5:9.03:0,9,293	0/1:28,0:19:0:0,0,0	0/1:97,0:25:0.06:0,0,0	0/1:29,3:25:47.03:290,0,47	0/1:24,2:21:33.14:96,0,33	0/1:6,1:5:26.87:111,0,27	0/0:19,0:11:3.01:0,3,94	0/1:45,1:14:45.19:45,0,971	0/0:23,0:14:16.10:0,16,315	./.
chr10	87467117	.	G	GGAT	1516.98	PASS	AB=0.979;AC=13;AF=0.271;AN=48;BaseQRankSum=3.426;DP=1019;FS=44.167;HRun=0;HaplotypeScore=116.9061;InbreedingCoeff=-0.1394;MQ=18.77;MQ0=427;MQRankSum=0.517;QD=3.78;ReadPosRankSum=-1.491;VQSLOD=0.4171;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:19:14.87:0,15,169	1/1:15,2:13:6.40:178,6,0	./.	./.	./.	0/1:14,0:9:32.82:143,0,33	0/1:21,0:7:11.03:33,0,11	0/0:62,0:5:12.04:0,12,196	0/0:59,0:32:21.34:0,21,293	0/1:59,8:40:99:603,0,868	0/1:34,2:25:78.87:204,0,79	0/0:49,0:22:3.35:0,3,50	0/0:53,0:23:12.03:0,12,175	0/0:48,0:23:12.36:0,12,190	0/0:48,0:21:14.94:0,15,206	0/0:54,0:28:33.09:0,33,500	0/1:12,1:5:57.80:58,0,89	0/1:10,0:5:10.19:67,0,10	0/0:31,0:5:9.03:0,9,142	0/0:27,0:18:3.01:0,3,46	0/1:101,0:22:0.01:0,0,0	0/1:34,0:25:31.20:207,0,31	0/1:29,0:23:12.29:95,0,12	0/1:10,0:5:12.51:60,0,13	0/0:20,0:11:3.01:0,3,49	0/1:49,0:14:5.38:5,0,497	0/0:30,0:18:14.67:0,15,193	./.
chr10	87467151	.	GGAT	G	219.74	PASS	AB=0.977;AC=16;AF=0.333;AN=48;BaseQRankSum=5.372;DP=1035;FS=10.227;HRun=0;HaplotypeScore=106.1059;InbreedingCoeff=0.0278;MQ=19.64;MQ0=425;MQRankSum=-2.180;QD=0.50;ReadPosRankSum=1.076;VQSLOD=1.5730;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:55,0:18:4.88:5,0,242	0/1:15,0:10:2.11:18,0,2	./.	./.	./.	0/0:11,0:6:6.01:0,6,78	0/1:23,0:8:5.80:6,0,29	./.	0/1:64,1:27:35.92:36,0,342	0/1:52,3:28:99:103,0,300	0/1:33,2:20:0.21:7,0,0	0/1:55,0:28:14.85:15,0,376	0/0:54,0:25:15.05:0,15,274	0/1:55,0:20:1.84:2,0,320	0/0:60,1:24:14.69:0,15,199	0/0:72,0:41:33.58:0,34,528	1/1:13,0:5:5.88:37,6,0	1/1:12,0:5:6:66,6,0	0/0:41,0:4:6.02:0,6,106	0/0:22,0:14:3.01:0,3,39	0/0:93,1:24:22.15:0,22,405	0/1:21,3:19:10.73:11,0,24	1/1:22,2:17:0.05:4,0,0	0/1:9,0:5:28.41:45,0,28	0/0:27,0:16:9.02:0,9,134	0/0:60,0:13:33:0,33,499	0/0:38,0:20:1.17:0,1,309	0/0:20,0:6:9.03:0,9,122
chr10	87467158	.	G	GGAT	91.51	PASS	AB=0.989;AC=6;AF=0.120;AN=50;BaseQRankSum=3.743;DP=1012;FS=1.206;HRun=0;HaplotypeScore=106.1529;InbreedingCoeff=0.0474;MQ=20.95;MQ0=413;MQRankSum=-2.942;QD=0.49;ReadPosRankSum=3.239;VQSLOD=1.1895;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:16:16.93:0,17,227	0/0:9,0:6:1.44:0,1,42	./.	./.	0/0:18,0:12:3:0,3,25	0/0:9,0:5:9.03:0,9,120	0/0:22,0:7:5.97:0,6,44	./.	0/1:67,0:30:13.36:13,0,453	0/1:40,2:17:63.81:64,0,244	1/1:23,4:14:5.72:92,6,0	0/0:59,0:35:35.45:0,35,524	0/0:56,0:28:18.95:0,19,277	0/0:57,0:22:27.67:0,28,376	0/0:65,0:26:12.28:0,12,171	0/0:72,0:43:33.05:0,33,453	0/0:12,0:5:3.14:0,3,12	0/1:13,0:5:26.80:27,0,70	0/0:44,0:3:6:0,6,73	0/0:24,0:17:9.02:0,9,112	0/0:91,0:27:31.32:0,31,481	0/0:18,0:14:6.04:0,6,33	0/0:18,0:11:6:0,6,29	0/0:9,0:5:8.98:0,9,85	0/0:29,0:18:12.02:0,12,164	0/0:67,0:16:39:0,39,550	0/1:39,0:20:9.95:10,0,233	0/0:19,0:6:9.03:0,9,144
chr10	87467166	.	GGAT	G	160.47	PASS	AB=0.973;AC=14;AF=0.280;AN=50;BaseQRankSum=6.681;DP=1004;FS=5.742;HRun=0;HaplotypeScore=103.7398;InbreedingCoeff=-0.0190;MQ=22.40;MQ0=397;MQRankSum=-5.101;QD=0.50;ReadPosRankSum=2.855;VQSLOD=1.3606;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:52,2:18:51.17:51,0,238	0/1:8,0:5:8.19:20,0,8	./.	./.	0/0:20,0:15:3.01:0,3,62	0/0:10,0:5:9.03:0,9,151	0/0:21,1:8:8.77:0,9,70	./.	0/0:64,0:32:35.46:0,35,833	0/1:35,3:17:99:108,0,177	1/1:19,2:11:0.19:0,0,0	0/0:59,0:37:54.63:0,55,1004	0/1:50,1:24:25.45:25,0,288	0/1:61,0:26:10.62:11,0,668	0/0:71,0:32:36.28:0,36,594	0/0:74,0:45:48.93:0,49,836	1/1:10,1:4:2.74:12,3,0	0/1:16,0:5:17.95:18,0,61	0/0:42,0:3:6.02:0,6,106	0/0:25,0:16:9.03:0,9,168	0/0:86,0:25:40.38:0,40,779	0/0:15,3:14:5.59:0,6,48	1/1:13,2:9:1.34:7,1,0	0/1:9,1:6:6.63:7,0,43	0/0:26,0:16:12.04:0,12,243	0/0:67,0:18:53.95:0,54,850	0/1:38,0:19:33.02:33,0,339	0/0:18,0:6:11.53:0,12,182
chr10	87467198	.	TTGATA	T	306.86	PASS	AB=0.958;AC=13;AF=0.250;AN=52;BaseQRankSum=8.561;DP=894;FS=13.416;HRun=0;HaplotypeScore=135.3474;InbreedingCoeff=-0.1452;MQ=31.38;MQ0=242;MQRankSum=-8.702;QD=0.83;ReadPosRankSum=0.036;VQSLOD=2.0195;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,1:35:36.51:0,37,2146	0/1:8,0:8:1.72:2,0,317	./.	./.	0/0:21,0:20:27.09:0,27,790	0/0:6,1:5:3.48:0,3,39	0/1:22,2:16:11.73:12,0,373	0/0:38,0:10:30.10:0,30,819	0/0:51,2:33:59.75:0,60,2002	0/1:19,2:16:24.64:25,0,1072	0/0:5,0:4:2.51:0,3,11	0/0:59,1:45:47.34:0,47,2774	0/1:44,3:30:90.34:90,0,1204	0/1:56,2:40:47.40:47,0,2480	0/1:59,2:38:3.83:4,0,2335	0/1:61,3:43:99:100,0,2090	1/1:5,0:3:5.85:48,6,0	0/1:25,1:14:4.82:5,0,187	0/0:27,0:8:21.07:0,21,642	0/0:25,0:23:27.09:0,27,825	0/0:69,0:41:99:0,114,3533	0/1:15,1:15:45.08:45,0,178	0/1:12,0:10:18.02:18,0,217	0/0:12,2:10:9.74:0,10,135	0/0:21,0:17:27.09:0,27,892	0/0:40,0:21:63.19:0,63,1878	0/1:27,1:15:52.06:52,0,518	0/0:19,1:14:20.84:0,21,877
chr10	87467202	.	TA	T	1281.68	PASS	AB=0.737;AC=13;AF=0.250;AN=52;BaseQRankSum=10.028;DP=920;FS=0.000;HRun=1;HaplotypeScore=106.7673;InbreedingCoeff=0.2016;MQ=32.13;MQ0=230;MQRankSum=-4.898;QD=6.05;ReadPosRankSum=0.372;VQSLOD=0.3751;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,2:36:69.11:0,69,1185	0/0:7,1:8:14.17:0,14,178	./.	./.	0/0:22,0:21:30.10:0,30,477	1/1:6,2:5:2.34:41,2,0	0/1:8,16:16:99:268,0,177	0/0:37,0:11:33.10:0,33,503	0/0:54,2:37:55.67:0,56,1079	0/0:22,0:17:30.92:0,31,632	0/0:4,0:4:2.59:0,3,11	0/0:61,2:48:64.18:0,64,1483	0/0:47,1:32:17.10:0,17,638	0/0:60,0:43:25.83:0,26,1329	0/0:67,0:44:55.53:0,56,1283	0/1:56,6:43:15.09:15,0,1022	1/1:2,3:3:5.38:44,5,0	0/1:6,20:14:16.54:345,0,17	0/0:27,0:8:21.07:0,21,336	0/0:26,0:24:30.10:0,30,479	0/0:72,0:46:99:0,120,1889	0/1:9,7:16:40.86:257,0,41	0/1:5,7:10:38.92:240,0,39	1/1:3,9:10:12.92:169,13,0	0/0:24,0:20:30.10:0,30,478	0/0:40,0:22:63.20:0,63,983	0/1:26,0:15:0.79:1,0,262	0/1:14,4:15:50.59:51,0,398
chr10	87467230	.	TG	T	448.64	PASS	AB=0.713;AC=5;AF=0.096;AN=52;BaseQRankSum=4.333;DP=1013;FS=4.199;HRun=2;HaplotypeScore=119.8379;InbreedingCoeff=0.2349;MQ=30.86;MQ0=291;MQRankSum=-2.665;QD=10.43;ReadPosRankSum=-2.652;VQSLOD=0.8664;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:43:99:0,102,1472	0/1:1,4:5:7.95:105,0,8	./.	./.	0/0:25,0:18:30.10:0,30,450	0/0:12,0:4:3.01:0,3,45	0/0:27,0:17:31.26:0,31,362	0/0:44,0:11:33.11:0,33,495	0/0:66,0:41:87.77:0,88,1296	0/1:14,11:15:78.31:367,0,78	1/1:3,2:3:2.99:39,3,0	0/0:62,1:47:79.02:0,79,1580	0/0:50,0:29:51.17:0,51,751	0/0:64,1:46:35.96:0,36,1399	0/0:72,0:47:99:0,105,1506	0/0:57,1:40:80.84:0,81,1178	0/1:7,1:4:34.76:49,0,35	0/0:28,0:14:35.91:0,36,504	0/0:25,0:7:21.07:0,21,315	0/0:30,0:26:33.11:0,33,495	0/0:82,0:53:99:0,123,1841	0/0:16,0:15:21.69:0,22,274	0/0:14,0:8:21.07:0,21,304	0/0:19,0:12:21.89:0,22,288	0/0:30,0:20:36.12:0,36,540	0/0:47,1:26:75.23:0,75,1096	0/0:26,0:14:28.55:0,29,403	0/0:23,1:17:33.04:0,33,447
chr10	87467242	.	TAATG	T	321.80	PASS	AB=1.000;AC=7;AF=0.135;AN=52;BaseQRankSum=7.142;DP=918;FS=11.900;HRun=0;HaplotypeScore=124.9397;InbreedingCoeff=0.6202;MQ=30.58;MQ0=292;MQRankSum=-4.904;QD=7.85;ReadPosRankSum=-3.760;VQSLOD=0.7705;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:41:60.21:0,60,1455	1/1:3,3:5:1.62:133,2,0	./.	./.	0/0:24,0:15:26.43:0,26,447	0/0:9,0:2:3.01:0,3,87	0/0:23,0:17:24.06:0,24,389	0/0:39,0:7:20.97:0,21,214	0/0:52,0:35:81.06:0,81,1765	1/1:20,2:13:22.65:266,23,0	1/1:4,2:3:3.01:36,3,0	0/0:61,0:43:79.80:0,80,1805	0/0:43,0:23:38.79:0,39,880	0/0:61,0:46:25.67:0,26,1814	0/0:61,0:39:95.73:0,96,2007	0/0:47,0:34:53.31:0,53,1527	0/1:7,0:3:1.18:8,0,1	0/0:22,0:13:28.56:0,29,645	0/0:22,0:8:24.05:0,24,532	0/0:26,0:22:7.07:0,7,536	0/0:77,0:51:99:0,110,2113	0/0:14,0:13:16.41:0,16,291	0/0:13,0:8:20.83:0,21,363	0/0:17,0:12:4:0,4,369	0/0:23,0:16:32.68:0,33,685	0/0:52,0:26:68.08:0,68,1573	0/0:18,0:13:1.41:0,1,405	0/0:20,0:13:25.89:0,26,561
chr10	87467294	.	ATGGG	A	189.12	PASS	AB=0.937;AC=12;AF=0.300;AN=40;BaseQRankSum=5.215;DP=893;FS=7.388;HRun=0;HaplotypeScore=78.7441;InbreedingCoeff=0.0822;MQ=18.79;MQ0=420;MQRankSum=-1.879;QD=0.62;ReadPosRankSum=1.127;VQSLOD=0.8927;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,2:20:17.34:0,17,286	0/1:9,0:8:12.97:13,0,178	./.	./.	./.	./.	0/1:19,4:15:9.92:10,0,52	0/0:50,0:3:8.99:0,9,181	0/0:57,0:28:31.18:0,31,559	0/0:20,0:5:5.60:0,6,182	1/1:12,0:9:0.47:1,0,0	0/0:52,0:26:23.91:0,24,535	0/0:62,0:25:16.07:0,16,281	0/1:62,0:31:1.72:2,0,251	0/0:53,0:30:42.03:0,42,821	0/1:53,1:27:48.36:48,0,312	1/1:11,1:4:11.75:110,12,0	0/1:16,5:11:53.91:104,0,54	./.	0/0:23,0:12:2.99:0,3,24	0/1:100,2:36:15.57:16,0,54	1/1:9,0:6:0.47:1,0,0	./.	0/0:12,4:8:0.29:0,0,2	./.	0/0:36,2:7:20.76:0,21,404	0/0:21,0:8:5.92:0,6,60	./.
chr10	87467319	.	GGAT	G	176.58	PASS	AB=0.988;AC=11;AF=0.262;AN=42;BaseQRankSum=4.412;DP=1026;FS=16.287;HRun=0;HaplotypeScore=90.1669;InbreedingCoeff=-0.2077;MQ=18.22;MQ0=440;MQRankSum=-0.375;QD=0.42;ReadPosRankSum=-0.457;VQSLOD=0.7458;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:24:6.79:0,7,301	0/1:10,0:10:21.16:21,0,265	./.	./.	./.	1/1:15,0:8:5.58:26,6,0	0/1:34,0:17:51.52:52,0,174	0/0:69,0:3:6:0,6,78	0/0:61,0:31:13.86:0,14,383	0/0:18,0:4:9.03:0,9,201	./.	0/1:56,1:29:4.81:5,0,592	0/1:58,1:26:58.09:58,0,300	0/1:61,2:36:69.93:70,0,331	0/1:72,1:40:30.96:31,0,706	0/1:64,0:29:22.84:23,0,414	0/1:11,0:4:9.42:9,0,29	0/0:25,1:15:14.80:0,15,323	0/1:33,1:2:6.53:7,0,61	./.	0/0:119,1:48:11.74:0,12,213	0/0:12,0:6:4.53:0,5,12	0/0:13,0:8:3.01:0,3,39	0/0:16,1:7:6.94:0,7,49	./.	0/0:54,0:10:27.01:0,27,490	0/0:23,0:9:2.96:0,3,20	./.
chr10	87467334	.	GGAT	G	169.49	PASS	AB=0.976;AC=11;AF=0.250;AN=44;BaseQRankSum=4.932;DP=1096;FS=18.342;HRun=0;HaplotypeScore=92.5562;InbreedingCoeff=-0.1588;MQ=18.07;MQ0=460;MQRankSum=0.476;QD=0.35;ReadPosRankSum=1.049;VQSLOD=0.5552;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:57,0:22:8.47:8,0,226	0/0:12,0:10:18.05:0,18,286	./.	./.	./.	1/1:13,1:8:4.90:17,5,0	0/1:36,1:17:63.13:63,0,228	0/0:97,0:2:6.02:0,6,124	0/0:62,0:32:12.97:0,13,428	0/0:19,0:5:14.91:0,15,186	./.	0/0:55,0:31:14.01:0,14,552	0/1:63,0:31:2.19:2,0,375	0/0:72,0:40:25.90:0,26,465	0/1:70,0:39:4.06:4,0,730	0/1:61,2:30:72.09:72,0,415	0/1:11,1:5:37.49:37,0,104	0/1:26,0:16:18.46:18,0,350	0/0:37,0:5:2.10:0,2,170	0/0:30,0:13:3.01:0,3,39	0/1:124,4:50:50.22:50,0,220	0/0:12,0:6:7.54:0,8,51	0/0:16,0:8:1.25:0,1,3	0/1:16,1:8:19.63:20,0,50	./.	0/0:69,0:15:33.11:0,33,632	0/0:25,0:8:6.02:0,6,134	./.
chr10	87467352	.	G	GGAT	215.08	PASS	AB=0.958;AC=5;AF=0.104;AN=48;BaseQRankSum=2.393;DP=1059;FS=9.655;HRun=0;HaplotypeScore=100.0435;InbreedingCoeff=0.1319;MQ=20.69;MQ0=418;MQRankSum=-1.541;QD=4.89;ReadPosRankSum=0.351;VQSLOD=1.3648;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:15:12:0,12,166	0/1:6,1:5:13.05:32,0,13	./.	./.	0/0:28,0:6:3.01:0,3,49	0/1:12,0:8:44.77:45,0,50	0/0:27,0:9:2.46:0,2,153	0/0:84,0:1:3.01:0,3,49	0/0:56,0:33:30.06:0,30,460	1/1:13,3:3:9.03:201,9,0	./.	0/0:58,0:34:27.41:0,27,641	0/0:65,0:35:13.44:0,13,621	0/0:76,0:47:35.87:0,36,573	0/0:77,0:46:60.30:0,60,853	0/0:65,0:33:41.84:0,42,615	0/1:9,0:5:41.86:50,0,42	0/0:23,0:14:32.84:0,33,385	0/0:39,0:7:21.03:0,21,281	0/0:35,0:16:6.02:0,6,98	0/0:122,0:56:24.12:0,24,295	0/0:8,0:1:3.01:0,3,45	./.	0/0:19,0:9:11.46:0,11,109	0/0:41,0:16:8.94:0,9,81	0/0:66,2:15:27.09:0,27,421	0/0:28,0:12:14.77:0,15,245	0/0:17,0:8:3.01:0,3,33
chr10	87467397	.	AGGAT	A	140.73	PASS	AB=0.956;AC=11;AF=0.196;AN=56;BaseQRankSum=4.917;DP=774;FS=16.192;HRun=0;HaplotypeScore=102.6740;InbreedingCoeff=0.4615;MQ=32.48;MQ0=210;MQRankSum=-4.354;QD=2.51;ReadPosRankSum=-1.917;VQSLOD=0.7667;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:13:24:0,24,466	0/0:5,0:5:6.02:0,6,135	0/0:28,0:2:5.81:0,6,58	0/0:40,0:1:3:0,3,28	0/0:22,0:17:21.03:0,21,472	1/1:5,2:4:0.89:2,1,0	1/1:5,5:5:8.82:116,9,0	0/0:37,0:8:24.08:0,24,590	0/0:49,0:40:78.27:0,78,1837	0/0:16,0:9:15.03:0,15,265	0/0:6,0:6:0.47:0,0,1	0/0:63,0:53:99:0,99,2455	0/0:52,0:42:65.14:0,65,2002	0/0:64,0:49:99:0,99,2324	0/0:57,0:45:90.31:0,90,2161	0/0:47,0:34:72.67:0,73,1697	0/1:6,0:6:6.62:7,0,106	0/1:11,2:7:39.98:40,0,101	0/0:21,0:7:15.04:0,15,358	0/0:21,0:13:18.53:0,19,437	0/0:61,0:32:39.12:0,39,943	1/1:2,3:5:3.01:52,3,0	1/1:3,2:4:3.90:51,4,0	0/1:9,0:6:0.82:1,0,35	0/0:30,0:23:45.15:0,45,1037	0/0:34,0:18:45.03:0,45,929	0/0:21,0:12:27.09:0,27,568	0/0:16,0:10:21.07:0,21,493
chr10	87467503	.	G	GGAT	788.72	PASS	AB=0.913;AC=5;AF=0.089;AN=56;BaseQRankSum=6.752;DP=1504;FS=1.729;HRun=0;HaplotypeScore=208.6551;InbreedingCoeff=0.2129;MQ=34.57;MQ0=206;MQRankSum=-5.058;QD=7.24;ReadPosRankSum=-3.825;VQSLOD=2.6513;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:46:83.80:0,84,1252	0/1:21,2:15:99:248,0,120	0/0:19,0:5:10.54:0,11,116	0/0:24,0:12:25.88:0,26,454	0/0:30,0:22:42.10:0,42,640	0/0:44,0:31:57.32:0,57,863	0/0:95,0:55:68.91:0,69,1039	0/0:67,0:21:48.16:0,48,783	0/0:80,0:68:99:0,163,2612	0/1:49,4:27:99:414,0,382	1/1:17,0:7:3:25,3,0	0/0:80,0:65:99:0,136,2588	0/0:63,0:47:99:0,120,1844	0/0:78,0:64:99:0,168,2596	0/0:91,0:74:99:0,182,2853	0/0:84,0:60:99:0,151,2428	0/1:14,2:13:99:213,0,158	0/0:64,0:48:88.60:0,89,1878	0/0:35,0:16:48.16:0,48,765	0/0:35,0:28:49.01:0,49,752	0/0:160,0:103:99:0,148,2330	0/0:33,0:24:48.06:0,48,684	0/0:25,0:21:30.59:0,31,428	0/0:50,0:35:46.21:0,46,733	0/0:29,0:21:36.12:0,36,571	0/0:79,0:56:99:0,150,2342	0/0:45,0:29:69.14:0,69,1074	0/0:20,0:15:24.07:0,24,339
chr10	87467584	.	TG	T	786.05	PASS	AB=0.898;AC=9;AF=0.161;AN=56;BaseQRankSum=9.313;DP=1281;FS=7.554;HRun=2;HaplotypeScore=164.3809;InbreedingCoeff=-0.2073;MQ=37.33;MQ0=178;MQRankSum=-7.570;QD=2.79;ReadPosRankSum=0.950;VQSLOD=-0.2968;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:52:99:0,100,1373	0/1:17,4:10:68.84:69,0,128	0/0:8,0:4:8.35:0,8,73	0/0:16,0:2:2.97:0,3,20	0/0:26,0:18:30.10:0,30,444	0/1:30,1:22:36.36:36,0,99	0/1:49,2:24:11.07:11,0,93	0/0:75,0:30:78.22:0,78,1133	0/0:63,3:54:99:0,108,1811	0/1:37,9:19:99:227,0,167	0/0:15,5:10:2.97:0,3,20	0/0:67,3:58:46.80:0,47,1759	0/0:69,1:54:99:0,127,1788	0/0:63,1:53:99:0,130,1892	0/0:63,0:48:74.74:0,75,1441	0/0:83,0:66:99:0,136,2250	0/1:13,6:16:99:173,0,223	0/1:31,3:24:99:123,0,330	0/0:47,0:15:39.13:0,39,574	0/0:31,0:21:51.17:0,51,748	0/0:164,1:109:99:0,214,3092	0/1:27,0:14:26.09:26,0,114	0/1:16,2:10:30.04:101,0,30	0/1:30,4:27:99:158,0,159	0/0:27,0:21:48.99:0,49,668	0/0:47,1:27:63.07:0,63,1046	0/0:37,1:31:36.43:0,36,1008	0/0:18,0:15:30.06:0,30,402
chr10	87467607	.	T	TGATG	1306.37	PASS	AB=0.884;AC=8;AF=0.143;AN=56;BaseQRankSum=4.291;DP=1268;FS=49.217;HRun=0;HaplotypeScore=204.0340;InbreedingCoeff=0.1083;MQ=38.93;MQ0=149;MQRankSum=-7.623;QD=5.23;ReadPosRankSum=-1.199;VQSLOD=1.2682;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:57:88.31:0,88,1579	0/1:13,8:15:11.02:233,0,11	0/0:9,0:4:9.03:0,9,133	0/0:12,0:5:14.99:0,15,151	0/0:26,0:15:24.08:0,24,401	0/0:27,0:20:2.64:0,3,398	0/0:49,0:33:30.83:0,31,453	0/0:59,0:17:33.10:0,33,527	0/0:55,1:57:82.84:0,83,1795	1/1:33,6:20:45.09:854,45,0	0/1:19,1:12:80.24:96,0,80	0/1:68,0:64:21.45:21,0,1988	0/0:63,0:53:37.64:0,38,1266	0/0:58,0:53:49.27:0,49,1522	0/0:53,0:49:76.62:0,77,1613	0/0:68,0:60:49.11:0,49,1664	0/1:15,1:16:50.46:206,0,50	0/0:27,0:24:53.25:0,53,720	0/0:55,0:22:36.12:0,36,590	0/0:34,0:22:35.71:0,36,594	0/0:146,0:106:99:0,170,2849	0/1:34,0:19:6.87:7,0,277	0/0:15,0:8:3.96:0,4,172	0/1:34,0:31:27.54:28,0,673	0/0:30,0:21:42.12:0,42,705	0/0:44,0:25:54.18:0,54,897	0/0:37,0:34:58.74:0,59,891	0/0:14,0:12:17.95:0,18,257
chr10	87468975	.	CA	C	1581.82	PASS	AB=0.912;AC=9;AF=0.161;AN=56;BaseQRankSum=1.719;DP=601;FS=0.000;HRun=1;HaplotypeScore=71.8245;InbreedingCoeff=0.8404;MQ=75.68;MQ0=0;MQRankSum=-1.357;QD=21.67;ReadPosRankSum=-1.495;VQSLOD=3.1958;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,1889	1/1:0,4:4:12.04:167,12,0	0/0:15,0:15:39.11:0,39,563	0/0:10,0:10:12.82:0,13,278	0/0:14,0:14:42.14:0,42,665	0/0:18,0:18:23.29:0,23,293	0/0:32,0:32:22.47:0,22,443	0/0:16,0:16:48.16:0,48,748	0/0:23,0:23:69.22:0,69,1079	1/1:0,11:11:33.11:455,33,0	1/1:0,7:7:18.06:251,18,0	0/0:37,0:37:99:0,111,1744	0/0:28,0:28:84.27:0,84,1319	0/0:29,0:29:84.29:0,84,1337	0/0:20,0:20:60.18:0,60,913	0/0:22,0:22:66.20:0,66,1004	1/1:0,20:20:60.20:838,60,0	0/0:30,0:29:44.79:0,45,431	0/0:24,0:24:69.23:0,69,1076	0/0:13,0:13:36.12:0,36,574	0/0:62,0:62:99:0,177,2683	0/0:18,0:18:22.07:0,22,249	0/0:4,0:4:11.69:0,12,82	0/0:36,0:36:42.65:0,43,531	0/0:13,0:13:39.13:0,39,622	0/1:28,3:31:32.22:32,0,1226	0/0:14,0:14:39.09:0,39,574	0/0:7,0:7:21.05:0,21,311
chr10	87469994	.	G	GA	2854.88	PASS	AB=0.880;AC=34;AF=0.607;AN=56;BaseQRankSum=-2.248;DP=505;FS=0.000;HRun=11;HaplotypeScore=58.7877;InbreedingCoeff=0.5439;MQ=52.62;MQ0=21;MQRankSum=-0.196;QD=7.57;ReadPosRankSum=-2.074;VQSLOD=1.3463;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,35:43:58.14:726,58,0	1/1:4,0:4:3.81:19,4,0	0/1:37,0:10:5.35:5,0,57	0/0:45,0:11:12.14:0,12,143	0/0:10,0:10:23.91:0,24,185	1/1:12,1:14:12.66:74,13,0	0/1:14,1:14:8.73:40,0,9	1/1:17,20:35:51.24:473,51,0	0/0:15,0:15:35.86:0,36,278	1/1:18,0:17:0.36:10,0,0	1/1:11,0:11:6.25:15,6,0	0/0:15,0:14:17.91:0,18,137	0/0:9,0:9:20.88:0,21,162	0/0:14,0:14:23.90:0,24,185	0/0:12,0:12:29.88:0,30,232	0/1:16,1:17:6.64:7,0,136	0/1:17,0:15:1.26:1,0,2	1/1:17,1:17:5.26:81,5,0	1/1:6,11:17:26.73:328,27,0	1/1:4,15:21:9.29:223,9,0	1/1:8,14:21:12.02:122,12,0	1/1:6,1:7:7.32:52,7,0	0/1:10,2:11:3.23:102,0,3	1/1:16,0:16:2.85:53,3,0	0/0:7,0:6:14.93:0,15,114	1/1:4,16:19:36.04:352,36,0	0/1:3,18:21:0.85:268,0,1	1/1:5,3:5:9.02:91,9,0
chr10	87470005	.	AGAG	A	1639.07	PASS	AB=0.982;AC=23;AF=0.411;AN=56;BaseQRankSum=4.972;DP=488;FS=11.503;HRun=0;HaplotypeScore=82.3754;InbreedingCoeff=0.6233;MQ=64.59;MQ0=12;MQRankSum=-5.567;QD=8.58;ReadPosRankSum=-3.908;VQSLOD=0.3323;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:43.21:0,43,1199	1/1:0,1:6:14.91:151,15,0	0/0:47,0:19:43.15:0,43,474	0/0:54,0:21:36.33:0,36,550	0/0:12,0:12:33.09:0,33,627	1/1:14,0:14:31.59:268,32,0	0/1:9,1:9:3.59:101,0,4	0/1:35,0:34:72.37:72,0,1087	0/0:13,0:13:39.05:0,39,641	1/1:7,8:15:15.41:191,15,0	1/1:1,7:10:21.91:280,22,0	0/0:13,0:14:27.05:0,27,479	0/0:11,0:11:27.06:0,27,558	0/0:10,0:10:24.06:0,24,456	0/0:11,0:11:30.08:0,30,616	0/0:16,0:16:39.08:0,39,793	1/1:7,7:12:11.28:148,11,0	1/1:9,0:9:18.12:160,18,0	0/1:17,0:17:8.88:9,0,566	0/0:19,0:19:35.47:0,35,530	0/0:18,0:17:24.08:0,24,339	1/1:5,0:5:7.26:40,7,0	1/1:9,0:9:8.63:173,9,0	1/1:16,0:16:13.80:228,14,0	0/0:6,0:6:18.06:0,18,379	0/1:22,0:21:7.31:7,0,512	0/0:19,0:19:6.11:0,6,481	0/1:6,0:5:14.95:15,0,176
chr10	87470175	.	AGTGT	A	650.74	PASS	AB=0.933;AC=11;AF=0.196;AN=56;BaseQRankSum=4.925;DP=330;FS=13.930;HRun=0;HaplotypeScore=78.3649;InbreedingCoeff=0.6123;MQ=75.66;MQ0=5;MQRankSum=-3.410;QD=11.42;ReadPosRankSum=1.542;VQSLOD=1.7986;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:82.37:0,82,1321	1/1:0,3:5:15.05:211,15,0	0/0:14,0:12:23.91:0,24,406	0/0:15,0:12:5.29:0,5,380	0/0:9,0:9:24.06:0,24,467	0/0:8,0:9:11.19:0,11,68	0/0:4,0:4:3.47:0,3,26	0/0:48,0:44:99:0,120,1861	0/0:8,0:8:24.08:0,24,493	1/1:7,0:8:21.07:279,21,0	1/1:8,2:10:15.05:224,15,0	0/0:9,0:9:21.07:0,21,476	0/0:10,0:10:27.06:0,27,460	0/0:8,0:9:21.07:0,21,434	0/0:15,0:15:36.12:0,36,740	0/0:13,0:13:24.07:0,24,547	1/1:17,2:19:6.02:72,6,0	0/0:13,0:15:2.82:0,3,107	0/0:18,0:17:39.12:0,39,598	0/0:6,0:5:8.52:0,9,113	0/0:9,0:9:12.01:0,12,170	1/1:1,0:1:0.47:1,0,0	0/0:2,0:2:2.57:0,3,23	0/0:2,0:2:2.52:0,3,19	0/0:4,0:4:9.01:0,9,173	0/1:13,1:14:13.68:14,0,383	0/0:10,0:10:14.33:0,14,135	0/0:10,0:9:14.26:0,14,85
chr10	87470178	.	GTGTGTA	G	1147.86	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=6.683;DP=323;FS=23.279;HRun=0;HaplotypeScore=85.4320;InbreedingCoeff=0.3751;MQ=73.17;MQ0=5;MQRankSum=-5.391;QD=12.34;ReadPosRankSum=1.426;VQSLOD=0.6888;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:50.50:0,51,1688	1/1:5,0:5:15.05:343,15,0	0/0:15,0:12:23.89:0,24,405	0/0:13,0:10:4.96:0,5,356	0/0:8,0:8:24.08:0,24,639	0/0:9,0:9:4.81:0,5,87	0/0:5,0:4:3.48:0,3,55	0/0:52,0:47:99:0,102,2035	0/0:8,0:8:24.08:0,24,579	1/1:3,5:8:21.07:484,21,0	1/1:8,2:10:15.05:259,15,0	0/0:8,0:8:21.07:0,21,618	0/0:10,0:10:27.06:0,27,570	0/0:9,0:9:21.07:0,21,504	0/0:13,0:13:36.12:0,36,903	0/0:12,0:12:27.07:0,27,751	1/1:2,14:16:7.26:110,7,0	0/1:16,0:15:6.02:6,0,268	0/0:17,0:16:37.92:0,38,608	0/1:6,0:5:10.21:10,0,92	0/0:9,0:9:12.04:0,12,198	1/1:1,0:1:0.47:1,0,0	0/0:2,0:2:2.58:0,3,52	0/0:2,0:2:2.52:0,3,19	0/0:5,0:5:12.02:0,12,332	0/1:14,0:14:43.55:44,0,355	0/1:9,0:9:26.33:26,0,83	0/1:8,0:7:29.10:29,0,93
chr10	87470182	.	GTA	G	1118.54	PASS	AB=0.892;AC=25;AF=0.500;AN=50;BaseQRankSum=6.780;DP=306;FS=2.290;HRun=0;HaplotypeScore=63.0306;InbreedingCoeff=0.1946;MQ=71.00;MQ0=8;MQRankSum=-1.676;QD=5.15;ReadPosRankSum=-2.866;VQSLOD=1.9482;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:35.23:35,0,332	1/1:5,0:5:14.54:83,15,0	1/1:15,0:11:0.21:1,0,0	./.	0/1:6,3:9:47.21:47,0,212	0/1:8,0:8:16.41:16,0,33	0/0:5,0:4:3.01:0,3,39	0/1:30,21:45:9.99:400,0,10	0/1:8,0:8:6.19:6,0,131	1/1:7,0:7:17.68:110,18,0	1/1:10,0:10:2.98:21,3,0	0/1:7,1:8:17.46:17,0,211	0/0:8,0:8:9:0,9,114	0/0:10,0:10:12.03:0,12,164	0/0:13,0:13:2.83:0,3,229	0/0:7,3:10:6.97:0,7,267	1/1:16,0:16:4.05:24,4,0	0/0:15,0:14:8.69:0,9,188	1/1:8,7:14:6.51:125,7,0	1/1:5,0:4:5.96:43,6,0	0/0:9,0:9:2.74:0,3,12	./.	0/0:2,0:2:3.01:0,3,38	./.	0/0:3,0:3:9.03:0,9,120	1/1:12,0:12:26.30:222,26,0	1/1:9,0:9:8.97:70,9,0	0/1:8,1:7:14.30:55,0,14
chr10	87470200	.	ATATATG	A	1988.97	PASS	AB=0.914;AC=26;AF=0.520;AN=50;BaseQRankSum=4.343;DP=258;FS=0.616;HRun=0;HaplotypeScore=74.1060;InbreedingCoeff=0.2577;MQ=56.48;MQ0=10;MQRankSum=-3.290;QD=9.52;ReadPosRankSum=-1.703;VQSLOD=1.7814;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,12:28:99:99,0,369	1/1:5,0:5:14.86:138,15,0	0/1:7,0:4:0:0,0,0	./.	0/1:10,0:10:8.69:9,0,392	0/1:8,0:8:16.41:16,0,33	0/0:2,0:1:3.01:0,3,39	1/1:42,0:32:8.40:551,8,0	0/1:5,0:5:3.19:3,0,325	1/1:7,0:7:20.61:128,21,0	1/1:6,0:6:2.99:24,3,0	0/1:7,0:7:14.46:14,0,407	0/0:5,0:5:12.03:0,12,300	0/0:7,0:7:15.04:0,15,375	0/0:9,0:9:5.84:0,6,359	0/0:12,0:12:26.41:0,26,628	1/1:17,0:17:4.05:24,4,0	0/1:16,0:15:44.45:44,0,176	1/1:11,0:10:13.68:200,14,0	1/1:2,5:6:5.98:89,6,0	0/0:3,2:5:2.74:0,3,12	./.	0/0:1,0:1:3.01:0,3,38	./.	0/0:5,0:5:15.02:0,15,228	1/1:2,9:11:29.75:404,30,0	1/1:1,10:11:8.76:211,9,0	0/1:4,7:9:14.23:196,0,14
chr10	87470204	.	ATGTATGTATGTATG	A	548.75	PASS	AB=0.933;AC=11;AF=0.220;AN=50;BaseQRankSum=4.969;DP=256;FS=14.252;HRun=0;HaplotypeScore=110.8454;InbreedingCoeff=0.1890;MQ=54.57;MQ0=11;MQRankSum=-0.969;QD=4.99;ReadPosRankSum=-0.202;VQSLOD=1.4337;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:50.52:0,51,1276	1/1:5,0:5:0.46:235,0,0	0/1:6,0:2:0:0,0,0	./.	0/0:10,0:10:14.33:0,14,927	0/1:7,0:7:0.48:0,0,17	0/0:2,0:1:2.90:0,3,16	0/1:41,0:31:4.46:4,0,547	0/0:6,0:7:21.07:0,21,984	0/0:7,0:7:0.23:0,0,9	1/1:6,0:6:3.01:75,3,0	0/0:7,0:7:10.19:0,10,847	0/0:5,0:6:15.05:0,15,770	0/0:6,0:6:15.05:0,15,775	0/0:7,0:9:24.08:0,24,822	0/0:12,0:12:27.09:0,27,1424	1/1:18,0:18:1.55:4,2,0	0/1:8,8:15:79.44:222,0,79	0/0:11,0:10:2.40:0,2,301	0/0:6,0:6:6.02:0,6,109	0/0:4,0:4:3.01:0,3,79	./.	0/0:1,0:1:2.90:0,3,16	./.	0/0:5,0:5:14.26:0,14,490	0/1:11,0:11:99:118,0,219	0/0:11,0:11:9.03:0,9,217	0/0:11,0:9:18.01:0,18,326
chr10	87470889	.	C	CT	1395.94	PASS	AB=0.793;AC=24;AF=0.429;AN=56;BaseQRankSum=-2.205;DP=418;FS=0.578;HRun=15;HaplotypeScore=59.3052;InbreedingCoeff=0.3231;MQ=52.34;MQ0=16;MQRankSum=-2.312;QD=4.99;ReadPosRankSum=-3.109;VQSLOD=1.0305;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,20:37:24.52:185,25,0	0/1:4,4:8:19.09:55,0,19	0/0:10,0:4:2.89:0,3,17	0/0:13,0:5:2.90:0,3,18	0/1:16,1:16:1.53:2,0,71	0/0:4,0:12:9.80:0,10,28	0/0:4,0:9:8.99:0,9,35	1/1:14,19:26:8.61:248,9,0	0/1:8,1:10:8.52:9,0,61	0/1:6,12:18:12.42:101,0,12	1/1:3,9:11:6.42:45,6,0	0/0:6,0:4:8.71:0,9,53	0/0:17,0:17:23.13:0,23,141	0/0:10,0:11:19.61:0,20,113	0/1:16,1:18:3.08:3,0,91	0/0:11,0:11:8.60:0,9,54	1/1:8,16:24:9.69:273,10,0	0/0:4,0:13:14.22:0,14,41	1/1:12,9:18:5.59:186,6,0	1/1:4,8:11:12.38:89,12,0	1/1:5,3:7:3:25,3,0	1/1:1,0:2:0.47:1,0,0	0/0:1,0:3:4.06:0,4,12	0/0:3,0:13:16.29:0,16,47	0/0:16,2:18:0.95:0,1,113	0/1:20,2:21:10.80:11,0,57	0/1:14,11:24:0.18:201,0,0	0/1:5,6:10:0.84:128,0,1
chr10	87472420	.	C	CT	83.98	PASS	AB=1.000;AC=11;AF=0.500;AN=22;BaseQRankSum=1.164;DP=156;FS=0.000;HRun=2;HaplotypeScore=10.6278;InbreedingCoeff=0.3034;MQ=14.43;MQ0=104;MQRankSum=-0.423;QD=3.65;ReadPosRankSum=-0.635;VQSLOD=-0.2103;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,2:2:3.01:42,3,0	./.	./.	0/0:5,0:4:6.02:0,6,70	0/0:9,0:1:2.97:0,3,20	./.	./.	./.	1/1:3,2:2:5.98:62,6,0	1/1:0,3:3:3.01:42,3,0	./.	./.	./.	0/0:7,0:2:2.97:0,3,20	./.	./.	./.	./.	0/1:4,0:3:9.71:12,0,10	./.	./.	1/1:4,0:4:4.74:16,5,0	./.	0/0:5,0:2:3.01:0,3,35	0/0:4,1:1:3:0,3,25	./.	1/1:5,0:1:2.22:7,2,0
chr10	87473468	.	TTCTCTCTCTC	T	990.04	PASS	AB=0.845;AC=8;AF=0.154;AN=52;BaseQRankSum=5.315;DP=477;FS=4.420;HRun=0;HaplotypeScore=132.3886;InbreedingCoeff=0.4546;MQ=65.25;MQ0=11;MQRankSum=-6.015;QD=9.17;ReadPosRankSum=-0.535;VQSLOD=2.4285;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,1:35:99:104,0,166	./.	./.	0/0:33,0:10:2.03:0,2,5	0/0:10,0:10:6.02:0,6,197	0/0:14,0:14:2.19:0,2,130	0/0:24,0:24:18.06:0,18,705	0/0:23,0:22:18.05:0,18,286	0/0:12,0:13:21.07:0,21,692	1/1:18,2:21:5.56:241,6,0	1/1:4,5:9:15.05:419,15,0	0/0:15,0:15:9.03:0,9,374	0/0:10,0:11:9.03:0,9,328	0/0:16,0:16:15.05:0,15,596	0/0:9,0:12:12.02:0,12,423	0/0:14,0:14:27.09:0,27,1219	1/1:18,4:21:12.04:354,12,0	0/0:15,0:15:18.06:0,18,619	0/0:16,0:16:10.57:0,11,118	0/0:11,0:10:9.02:0,9,112	0/0:21,0:21:9:0,9,156	0/0:18,0:18:2.19:0,2,116	0/0:11,0:10:3.01:0,3,145	0/0:24,0:24:15.05:0,15,598	0/0:17,0:17:18.05:0,18,740	0/1:19,0:21:3.07:3,0,269	0/0:10,0:14:13.40:0,13,108	0/0:9,0:9:9.03:0,9,129
chr10	87474764	.	AGAG	A	2361.32	PASS	AB=0.947;AC=9;AF=0.161;AN=56;BaseQRankSum=6.102;DP=807;FS=1.037;HRun=0;HaplotypeScore=133.1230;InbreedingCoeff=0.8742;MQ=54.93;MQ0=25;MQRankSum=1.597;QD=18.89;ReadPosRankSum=1.863;VQSLOD=3.1227;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:53:99:0,110,2223	1/1:3,0:3:6.01:71,6,0	0/1:33,1:9:3.05:3,0,49	0/0:44,0:14:17.69:0,18,220	0/0:29,0:29:78.24:0,78,1537	0/0:22,0:20:52.94:0,53,911	0/0:32,0:32:56.35:0,56,936	0/0:30,0:26:60.20:0,60,1069	0/0:17,0:17:48.16:0,48,972	1/1:3,30:33:93.30:1364,93,0	1/1:2,8:10:20.96:263,21,0	0/0:35,0:35:87.28:0,87,1635	0/0:24,0:23:60.18:0,60,1170	0/0:24,0:24:51.15:0,51,989	0/0:33,0:33:81.27:0,81,1606	0/0:29,0:29:84.26:0,84,1664	1/1:7,36:43:19.88:813,20,0	0/0:27,0:26:57.16:0,57,1094	0/0:20,0:17:39.07:0,39,652	0/0:20,0:18:48.13:0,48,897	0/0:55,0:54:99:0,140,2595	0/0:24,0:24:54.13:0,54,975	0/0:19,0:19:38.56:0,39,664	0/0:51,0:51:99:0,104,1697	0/0:21,0:21:57.18:0,57,1130	0/0:31,0:31:87.23:0,87,1615	0/0:22,0:21:60.11:0,60,1077	0/0:17,0:14:42.14:0,42,743
chr10	87474779	.	A	AGAG	4816.50	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.077;DP=835;FS=0.443;HRun=0;HaplotypeScore=127.9779;InbreedingCoeff=0.9962;MQ=58.69;MQ0=26;MQRankSum=0.271;QD=27.21;ReadPosRankSum=4.960;VQSLOD=4.6355;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:99:0,108,1542	0/0:6,0:6:18.01:0,18,222	0/0:43,0:11:23.62:0,24,276	0/0:54,0:16:26.65:0,27,254	0/0:30,0:30:81.21:0,81,1177	1/1:7,20:26:42.14:843,42,0	1/1:6,17:24:36.06:711,36,0	0/0:30,0:28:46.36:0,46,659	0/0:18,0:18:48.15:0,48,702	0/0:36,0:36:93.30:0,93,1324	0/0:8,0:8:21.07:0,21,290	0/0:38,0:38:99:0,102,1404	0/0:24,0:23:57.18:0,57,838	0/0:18,0:18:48.16:0,48,718	0/0:33,0:33:90.23:0,90,1296	0/0:35,0:35:99:0,102,1476	0/0:41,0:41:34.27:0,34,909	1/1:8,20:29:33.11:695,33,0	0/0:21,0:18:33.11:0,33,493	0/0:19,0:17:39:0,39,552	0/0:65,0:64:99:0,153,2222	1/1:3,22:25:39.13:820,39,0	1/1:4,14:18:24.08:495,24,0	1/1:15,38:53:60.21:1254,60,0	0/0:21,0:21:57.16:0,57,798	0/0:30,0:30:87.29:0,87,1290	0/0:24,0:23:50.52:0,51,700	0/0:18,0:15:33.11:0,33,483
chr10	87478565	.	A	ATCCACAG	36634.53	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-3.467;DP=686;FS=0.994;HRun=0;HaplotypeScore=170.2225;InbreedingCoeff=0.9871;MQ=74.55;MQ0=6;MQRankSum=-19.639;QD=83.07;ReadPosRankSum=-4.249;VQSLOD=4.5055;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,37:54:99:4002,108,0	1/1:1,6:7:15.05:559,15,0	0/0:23,0:23:63.21:0,63,1482	0/0:20,0:20:51.17:0,51,1253	0/0:26,0:26:78.25:0,78,1961	1/1:5,19:26:63.22:2380,63,0	1/1:15,14:31:69.24:2454,69,0	1/1:13,12:25:72.25:2713,72,0	0/0:24,0:24:72.23:0,72,1844	1/1:8,18:26:78.27:2996,78,0	1/1:2,10:13:18.06:724,18,0	0/0:31,0:31:87.30:0,87,2287	0/0:20,0:20:54.19:0,54,1417	0/0:23,0:23:66.23:0,66,1707	0/0:29,0:29:87.30:0,87,2282	0/0:25,0:25:72.25:0,72,1869	1/1:7,12:20:36.12:1427,36,0	1/1:6,8:13:24.08:962,24,0	1/1:18,8:27:81.26:2990,81,0	1/1:4,11:18:27.09:1084,27,0	1/1:12,13:26:36.10:1405,36,0	1/1:9,23:33:78.27:3021,78,0	1/1:4,11:14:24.08:964,24,0	1/1:13,20:33:63.11:2235,63,0	0/0:24,0:24:72.25:0,72,1832	1/1:11,23:35:99:3883,102,0	1/1:6,18:27:66.23:2601,66,0	1/1:2,1:6:9.03:236,9,0
chr10	87479845	.	A	ATCCCAGCT	6996.98	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=11.313;DP=715;FS=7.260;HRun=0;HaplotypeScore=186.1991;InbreedingCoeff=0.8844;MQ=79.39;MQ0=0;MQRankSum=-11.983;QD=61.92;ReadPosRankSum=-1.322;VQSLOD=3.6924;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,3227	1/1:2,6:8:21.07:912,21,0	0/0:22,0:22:37.63:0,38,1033	0/0:20,0:20:45.63:0,46,1062	0/0:19,0:19:57.20:0,57,1614	0/0:26,0:26:72.25:0,72,2011	0/0:25,0:25:60.19:0,60,1606	0/0:39,0:39:99:0,114,3043	0/0:23,0:23:69.24:0,69,1898	1/1:14,19:30:81.24:3094,81,0	1/1:1,8:9:24.08:920,24,0	0/0:33,0:33:96.33:0,96,2626	0/0:31,0:31:87.30:0,87,2411	0/0:34,0:34:99:0,99,2685	0/0:26,0:26:78.27:0,78,2175	0/0:27,0:27:78.25:0,78,2103	1/1:18,14:32:60.63:2064,61,0	0/0:28,0:28:81.28:0,81,2191	0/0:22,0:22:63.22:0,63,1732	0/0:14,0:14:39.13:0,39,1081	0/0:35,0:35:99:0,102,2815	0/0:20,0:20:57.18:0,57,1519	0/0:22,0:22:63.20:0,63,1722	0/0:22,0:22:66.18:0,66,1803	0/0:20,0:20:57.20:0,57,1605	0/1:31,0:31:7.48:7,0,2239	0/0:33,0:33:87.30:0,87,2402	0/0:20,0:20:57.16:0,57,1421
chr10	87479850	.	G	GA	2370.51	PASS	AB=0.529;AC=7;AF=0.125;AN=56;BaseQRankSum=10.202;DP=709;FS=9.985;HRun=0;HaplotypeScore=91.8963;InbreedingCoeff=0.8387;MQ=82.23;MQ0=0;MQRankSum=-12.164;QD=32.92;ReadPosRankSum=-0.208;VQSLOD=2.2609;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1636	1/1:0,7:7:21.07:321,21,0	0/0:24,0:24:61.72:0,62,729	0/0:20,0:20:51.13:0,51,664	0/0:20,0:20:60.18:0,60,820	0/0:28,0:28:81.27:0,81,1131	0/0:22,0:22:66.20:0,66,890	0/0:40,0:40:99:0,117,1619	0/0:23,0:23:69.23:0,69,964	1/1:0,28:25:72.24:1101,72,0	0/1:1,8:9:17.20:244,0,17	0/0:35,0:35:99:0,105,1450	0/0:29,0:29:87.29:0,87,1214	0/0:33,0:33:99:0,99,1366	0/0:27,0:27:81.26:0,81,1113	0/0:27,0:27:78.26:0,78,1091	1/1:4,24:28:37.63:853,38,0	0/0:28,0:28:84.25:0,84,1140	0/0:23,0:23:69.21:0,69,935	0/0:13,0:13:39.13:0,39,545	0/0:36,0:36:99:0,108,1510	0/0:19,0:19:54.17:0,54,733	0/0:24,0:24:72.22:0,72,974	0/0:23,0:23:69.22:0,69,949	0/0:24,0:24:69.22:0,69,950	0/0:30,0:30:90.29:0,90,1243	0/0:30,0:30:90.30:0,90,1251	0/0:20,0:20:60.20:0,60,839
chr10	87481362	.	C	CGT	2365.80	PASS	AB=0.878;AC=9;AF=0.161;AN=56;BaseQRankSum=12.167;DP=835;FS=3.572;HRun=0;HaplotypeScore=160.2373;InbreedingCoeff=0.5268;MQ=54.78;MQ0=11;MQRankSum=-4.819;QD=16.20;ReadPosRankSum=-1.778;VQSLOD=3.4940;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:86.87:0,87,1043	1/1:5,5:10:12.04:186,12,0	0/0:57,0:29:66.40:0,66,779	0/0:33,0:18:29.80:0,30,368	0/0:30,0:30:81.25:0,81,1006	0/0:18,0:18:9.55:0,10,225	0/0:29,0:29:41:0,41,524	0/0:31,0:31:60.10:0,60,712	0/0:40,0:40:93.28:0,93,1156	1/1:12,19:31:69.23:1075,69,0	0/1:9,9:18:7.77:398,0,8	0/0:40,0:40:90.28:0,90,1131	0/0:32,0:32:87.28:0,87,1093	0/0:29,0:29:75.24:0,75,945	0/0:31,0:31:84.24:0,84,1042	0/0:31,0:31:84.23:0,84,1042	1/1:17,14:30:54.17:824,54,0	0/0:32,0:32:44.83:0,45,705	0/0:18,0:18:36.09:0,36,443	0/0:19,0:19:45.14:0,45,567	0/0:88,0:88:99:0,196,2430	0/0:20,0:20:1.26:0,1,259	0/0:12,0:12:0.09:0,0,200	0/1:25,0:25:15.36:15,0,197	0/0:24,0:24:66.04:0,66,808	0/1:30,1:30:21.06:21,0,712	0/0:26,0:26:72.02:0,72,875	0/0:9,0:10:20.90:0,21,241
chr10	87481378	.	AGT	A	1527.77	PASS	AB=0.896;AC=13;AF=0.232;AN=56;BaseQRankSum=8.897;DP=865;FS=5.148;HRun=0;HaplotypeScore=150.5991;InbreedingCoeff=0.4082;MQ=53.27;MQ0=19;MQRankSum=-2.018;QD=7.64;ReadPosRankSum=-0.951;VQSLOD=3.1853;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,1:38:57.76:0,58,1368	1/1:2,4:7:18.02:182,18,0	0/0:58,0:23:2.56:0,3,46	0/0:37,0:15:3.31:0,3,24	0/0:24,1:25:5.26:0,5,532	0/0:7,0:18:11.23:0,11,62	0/0:23,0:37:8.74:0,9,66	0/0:23,0:23:0.76:0,1,449	0/1:33,2:36:5.31:5,0,1018	1/1:17,13:30:60.04:592,60,0	1/1:12,7:19:30.04:330,30,0	0/0:38,2:39:16.59:0,17,1166	0/0:32,2:34:78.15:0,78,1206	0/0:33,0:33:42.88:0,43,1015	0/0:31,0:31:43.25:0,43,1124	0/0:36,0:36:81.27:0,81,1257	1/1:19,5:26:44.76:452,45,0	0/0:24,0:40:22.03:0,22,220	0/1:19,1:18:2.24:2,0,432	0/1:14,3:18:25.55:26,0,549	0/0:83,0:83:99:0,117,2417	0/0:16,0:26:7.97:0,8,33	0/0:8,0:15:8.38:0,8,66	0/0:19,0:34:13.99:0,14,90	0/0:28,0:28:69.22:0,69,1050	0/1:25,4:28:64.94:65,0,802	0/0:25,0:26:56.77:0,57,832	0/1:11,2:13:40.30:40,0,345
chr10	87486495	.	AGATT	A	342.87	PASS	AB=0.803;AC=2;AF=0.036;AN=56;BaseQRankSum=-5.690;DP=505;FS=4.699;HRun=0;HaplotypeScore=71.4650;InbreedingCoeff=-0.0479;MQ=58.38;MQ0=19;MQRankSum=-9.357;QD=11.82;ReadPosRankSum=-8.244;VQSLOD=-0.6933;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:35.67:0,36,1096	0/0:7,0:7:13.37:0,13,273	0/0:34,0:9:27.09:0,27,581	0/0:33,0:8:20.23:0,20,283	0/0:22,0:21:34.43:0,34,790	0/1:9,4:13:99:231,0,382	0/0:8,1:7:12.10:0,12,307	0/0:30,0:28:55.47:0,55,1183	0/0:25,0:25:47.14:0,47,1089	0/0:25,0:22:38.26:0,38,811	0/0:19,0:18:40.85:0,41,861	0/0:13,0:13:25.32:0,25,537	0/0:14,0:14:35.23:0,35,815	0/0:9,0:9:20.47:0,20,467	0/0:17,0:16:37.27:0,37,728	0/0:14,0:14:33.54:0,34,815	0/0:24,0:23:42.71:0,43,931	0/0:9,0:9:27.09:0,27,566	0/0:17,0:16:38.91:0,39,828	0/0:21,0:21:39.25:0,39,916	0/0:8,0:8:11.17:0,11,261	0/0:6,0:11:2.55:0,3,101	0/1:13,3:16:99:201,0,434	0/0:10,0:10:30.09:0,30,582	0/0:21,0:21:46.35:0,46,956	0/0:17,0:17:39.28:0,39,792	0/0:22,0:21:55.86:0,56,1223	0/0:14,0:13:32.43:0,32,711
chr10	87487481	.	T	TG	9976.27	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-15.625;DP=742;FS=2.444;HRun=2;HaplotypeScore=69.9243;InbreedingCoeff=0.9986;MQ=63.88;MQ0=0;MQRankSum=0.554;QD=41.40;ReadPosRankSum=1.600;VQSLOD=4.9708;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,172,2219	1/1:0,10:10:18.06:270,18,0	0/0:17,0:15:44.76:0,45,514	0/0:21,0:19:44.89:0,45,530	0/0:28,0:28:81.25:0,81,1032	1/1:2,18:20:54.14:784,54,0	1/1:0,33:33:99:1484,99,0	0/0:36,0:36:99:0,108,1374	0/0:24,0:24:72.23:0,72,935	1/1:2,30:32:90.29:1326,90,0	1/1:0,11:11:33.11:495,33,0	0/0:23,0:23:69.22:0,69,895	0/0:27,0:27:78.25:0,78,1011	0/0:21,0:21:60.19:0,60,777	0/0:38,0:38:99:0,111,1440	0/0:22,0:22:63.20:0,63,809	1/1:0,33:33:90.30:1349,90,0	1/1:0,27:27:81.27:1214,81,0	0/0:23,0:22:63.20:0,63,818	0/0:25,0:25:75.22:0,75,943	0/0:39,0:39:99:0,114,1480	1/1:0,22:22:60.20:898,60,0	1/1:0,17:17:45.15:674,45,0	1/1:0,36:36:99:1484,99,0	0/0:25,0:25:75.13:0,75,884	0/0:25,1:26:28.50:0,28,854	0/0:38,0:37:99:0,111,1406	0/0:11,0:11:33.11:0,33,428
chr10	87487908	.	GC	G	5342.10	PASS	AB=0.857;AC=21;AF=0.375;AN=56;BaseQRankSum=16.021;DP=575;FS=4.701;HRun=7;HaplotypeScore=78.6486;InbreedingCoeff=0.9270;MQ=82.99;MQ0=0;MQRankSum=-3.671;QD=24.17;ReadPosRankSum=1.646;VQSLOD=5.4807;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:57.14:0,57,692	1/1:2,6:8:21.05:213,21,0	0/0:19,0:19:38.19:0,38,405	0/0:17,0:17:45.08:0,45,516	0/0:17,0:17:45.14:0,45,564	1/1:1,16:17:48.11:489,48,0	1/1:0,29:29:69.16:704,69,0	0/0:19,0:19:51.05:0,51,593	0/1:5,1:6:12.54:13,0,169	1/1:4,28:32:72.15:734,72,0	1/1:0,16:16:45.10:458,45,0	0/0:23,0:23:66.18:0,66,792	0/0:23,0:23:66.21:0,66,828	0/0:21,0:21:60.19:0,60,755	0/0:27,0:27:81.23:0,81,993	0/0:13,0:13:39.11:0,39,476	1/1:3,31:34:81.14:815,81,0	1/1:1,22:23:60.14:612,60,0	0/0:16,0:16:39.12:0,39,488	0/0:14,0:14:33.10:0,33,402	0/0:37,0:37:99:0,102,1240	1/1:0,14:14:39.09:397,39,0	1/1:1,12:13:39.05:387,39,0	1/1:5,24:29:51.07:520,51,0	0/0:16,0:16:39.11:0,39,473	0/0:30,2:32:38.65:0,39,776	0/0:13,0:13:36.12:0,36,453	0/0:15,0:15:42.12:0,42,514
chr10	87488020	.	AAAC	A	826.23	PASS	AB=0.818;AC=5;AF=0.089;AN=56;BaseQRankSum=4.592;DP=567;FS=3.734;HRun=0;HaplotypeScore=104.3910;InbreedingCoeff=-0.0892;MQ=82.03;MQ0=0;MQRankSum=-7.991;QD=7.51;ReadPosRankSum=-1.641;VQSLOD=2.8157;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,2531	0/0:10,0:10:30.08:0,30,386	0/0:25,0:25:72.24:0,72,1482	0/0:15,0:15:36.12:0,36,769	0/0:17,0:17:45.15:0,45,1031	0/0:14,0:14:42.09:0,42,508	0/1:20,16:36:99:350,0,701	0/0:20,0:20:60.21:0,60,1356	0/0:23,0:23:69.24:0,69,1579	0/1:14,12:26:99:439,0,816	0/0:15,0:15:39.08:0,39,459	0/0:26,0:26:75.26:0,75,1635	0/0:19,0:19:57.20:0,57,1301	0/0:23,0:23:69.24:0,69,1518	0/0:38,0:38:99:0,111,2430	0/0:13,0:13:39.13:0,39,872	0/0:22,0:22:45.12:0,45,552	0/1:11,0:11:0.48:0,0,437	0/0:18,0:18:45.15:0,45,963	0/0:10,0:10:21.06:0,21,430	0/0:30,0:30:90.31:0,90,2064	0/0:9,0:9:24.07:0,24,344	0/1:12,8:20:99:128,0,410	0/1:17,0:17:17.91:18,0,302	0/0:13,0:13:36.12:0,36,803	0/0:25,0:25:69.22:0,69,1519	0/0:28,0:28:84.29:0,84,1925	0/0:4,0:4:12.04:0,12,277
chr10	87488023	.	C	CAAGCAGCAGATCCCCAAGGGGCTA	32537.66	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=8.736;DP=637;FS=1.705;HRun=0;HaplotypeScore=340.8360;InbreedingCoeff=0.9927;MQ=78.07;MQ0=0;MQRankSum=-15.491;QD=133.90;ReadPosRankSum=1.156;VQSLOD=3.7067;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,105,5448	1/1:7,3:19:21.54:2180,22,0	0/0:25,0:25:51.17:0,51,1750	0/0:14,0:14:30.07:0,30,1043	0/0:17,0:17:45.14:0,45,2408	1/1:12,2:26:33.11:2791,33,0	1/1:35,0:35:81.26:5568,81,0	0/0:21,0:21:51.17:0,51,2389	0/0:23,0:23:69.24:0,69,3641	1/1:25,0:25:66.23:4640,66,0	1/1:14,1:26:27.09:2193,27,0	0/0:27,0:27:69.24:0,69,3796	0/0:19,0:19:45.15:0,45,2388	0/0:24,0:24:57.12:0,57,2663	0/0:39,0:39:99:0,102,5775	0/0:13,0:13:36.12:0,36,2173	1/1:18,3:31:57.20:4927,57,0	1/1:8,2:21:21.07:2059,21,0	0/0:16,0:16:39.13:0,39,1478	0/0:10,0:10:21.07:0,21,867	0/0:34,0:34:99:0,99,5140	1/1:8,1:13:21.07:2091,21,0	1/1:19,0:19:39.13:2369,39,0	1/1:13,4:28:39.13:3720,39,0	0/0:13,0:13:33.10:0,33,1313	0/0:25,0:25:69.23:0,69,3165	0/0:29,0:29:84.27:0,84,4671	0/0:4,0:4:12.04:0,12,775
chr10	87488741	.	CAG	C	2549.06	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.733;DP=748;FS=4.604;HRun=0;HaplotypeScore=93.2979;InbreedingCoeff=0.9945;MQ=83.55;MQ0=0;MQRankSum=-3.028;QD=36.42;ReadPosRankSum=1.749;VQSLOD=5.3748;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,2474	1/1:1,9:10:24.08:353,24,0	0/0:25,0:26:65.41:0,65,1273	0/0:30,0:30:83.35:0,83,1418	0/0:13,0:13:39.12:0,39,680	0/0:21,0:21:57.20:0,57,1067	0/0:31,0:31:90.27:0,90,1614	0/0:31,0:31:93.31:0,93,1679	0/0:31,0:31:90.29:0,90,1653	1/1:0,23:23:69.21:985,69,0	1/1:0,7:7:15.05:221,15,0	0/0:38,0:38:99:0,111,1988	0/0:24,0:24:72.23:0,72,1303	0/0:36,0:36:99:0,108,1998	0/0:25,0:25:72.25:0,72,1326	0/0:22,0:22:66.23:0,66,1225	1/1:2,28:30:78.26:1148,78,0	0/0:35,0:34:99:0,105,1919	0/0:27,0:27:75.26:0,75,1383	0/0:12,0:12:30.10:0,30,551	0/0:91,0:91:99:0,271,4771	0/0:12,0:12:36.12:0,36,660	0/0:17,0:17:51.17:0,51,929	0/0:40,0:40:99:0,120,2199	0/0:13,0:13:36.12:0,36,667	0/0:31,0:31:87.28:0,87,1567	0/0:18,0:18:51.16:0,51,903	0/0:9,0:9:27.09:0,27,506
chr10	87494100	.	C	CTT	2527.43	PASS	AB=0.590;AC=19;AF=0.339;AN=56;BaseQRankSum=2.791;DP=578;FS=15.846;HRun=12;HaplotypeScore=77.9215;InbreedingCoeff=0.8461;MQ=64.15;MQ0=10;MQRankSum=-1.667;QD=12.76;ReadPosRankSum=3.453;VQSLOD=0.7030;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:41:66.15:0,66,642	1/1:3,0:9:18.33:99,18,0	0/0:22,0:8:7.93:0,8,50	0/0:12,0:7:9.98:0,10,66	0/0:20,0:23:43.62:0,44,448	1/1:1,13:14:27.09:379,27,0	1/1:4,16:20:29.69:388,30,0	0/0:30,0:30:41.32:0,41,501	0/0:15,0:15:31.49:0,31,281	1/1:6,0:20:27.45:95,27,0	1/1:3,0:9:2.63:37,3,0	0/0:22,0:22:55.44:0,55,455	0/0:19,0:19:41.96:0,42,385	0/0:17,0:19:47.20:0,47,400	0/0:24,0:25:47.87:0,48,484	0/0:17,0:17:35.97:0,36,327	0/1:14,1:46:7.32:157,0,7	1/1:15,13:28:54.57:636,55,0	0/0:30,0:27:37.92:0,38,463	0/0:20,0:20:41.29:0,41,362	0/0:10,0:10:20.86:0,21,194	1/1:4,8:11:18.48:226,18,0	1/1:3,7:12:15.52:181,16,0	1/1:4,17:24:42.02:536,42,0	0/0:13,0:13:23.28:0,23,233	0/0:20,0:24:0.86:0,1,260	0/0:17,0:16:40.32:0,40,348	0/0:14,0:15:29.63:0,30,260
chr10	87496923	.	C	CT	3569.99	PASS	AB=0.564;AC=19;AF=0.339;AN=56;BaseQRankSum=-6.225;DP=533;FS=2.784;HRun=11;HaplotypeScore=59.8700;InbreedingCoeff=0.8152;MQ=65.82;MQ0=1;MQRankSum=-0.701;QD=17.67;ReadPosRankSum=1.925;VQSLOD=4.8765;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,3:41:25.87:0,26,536	1/1:1,9:10:3.82:220,4,0	0/0:10,0:8:11.32:0,11,54	0/0:12,0:9:1.47:0,1,45	0/0:19,1:20:23.14:0,23,347	0/1:5,15:22:45.17:285,0,45	1/1:2,12:16:32.66:281,33,0	0/0:26,0:26:49.58:0,50,375	0/0:12,0:12:28.93:0,29,215	1/1:10,18:28:27.85:457,28,0	1/1:9,18:28:36.74:513,37,0	0/0:16,0:16:32.79:0,33,252	0/0:19,0:19:53.79:0,54,418	0/0:13,0:13:31.92:0,32,238	0/0:19,0:19:53.78:0,54,418	0/0:10,0:10:26.89:0,27,209	1/1:3,26:29:48.90:677,49,0	1/1:8,17:26:7.47:425,7,0	0/0:24,1:26:27.42:0,27,376	0/0:20,0:21:31.46:0,31,356	0/0:12,0:13:34.91:0,35,261	1/1:4,11:16:6.65:231,7,0	1/1:3,12:15:6.84:251,7,0	1/1:4,7:12:24.77:230,25,0	0/0:15,0:18:39.89:0,40,290	0/0:22,0:23:43.84:0,44,330	0/0:18,0:18:41.81:0,42,325	0/0:11,0:12:28.93:0,29,215
chr10	87497307	.	C	CAT	630.75	PASS	AB=0.774;AC=12;AF=0.214;AN=56;BaseQRankSum=11.683;DP=424;FS=36.601;HRun=0;HaplotypeScore=110.2899;InbreedingCoeff=-0.1882;MQ=48.61;MQ0=6;MQRankSum=-9.810;QD=3.60;ReadPosRankSum=-2.077;VQSLOD=0.4635;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.18:0,69,990	0/1:6,4:9:73.95:74,0,156	0/0:3,0:2:1.82:0,2,5	0/1:5,0:3:0:0,0,0	0/1:10,10:20:42.18:42,0,286	0/0:10,2:12:22.49:0,22,448	0/1:11,2:12:22.32:22,0,337	0/0:17,0:16:30.10:0,30,441	0/0:9,0:9:27.09:0,27,413	0/0:11,5:16:10.32:0,10,434	0/1:7,6:11:5.21:5,0,167	0/0:14,2:16:23.30:0,23,507	0/1:8,3:11:10.59:11,0,254	0/0:5,0:4:12.04:0,12,184	0/0:18,0:17:45.14:0,45,660	0/0:12,2:14:9.08:0,9,347	0/0:23,0:22:63.21:0,63,960	0/0:22,0:22:63.21:0,63,964	0/0:15,0:11:30.05:0,30,415	0/1:11,3:13:90.79:91,0,265	0/0:9,0:9:24.08:0,24,367	0/1:13,7:19:99:190,0,453	0/1:10,5:14:12.09:12,0,250	0/0:22,2:24:25.32:0,25,879	0/1:14,11:25:99:180,0,530	0/1:11,7:18:81.99:82,0,413	0/0:19,1:20:47.81:0,48,733	0/1:9,2:11:63.07:63,0,314
chr10	87499670	.	C	CT	1832.52	PASS	AB=0.783;AC=30;AF=0.536;AN=56;BaseQRankSum=-0.409;DP=536;FS=4.285;HRun=16;HaplotypeScore=94.9800;InbreedingCoeff=-0.0433;MQ=71.07;MQ0=18;MQRankSum=-3.572;QD=4.27;ReadPosRankSum=-4.067;VQSLOD=0.4492;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,3:28:37.98:38,0,143	1/1:2,0:6:7.06:34,7,0	0/0:23,0:14:2.76:0,3,16	0/1:18,0:14:5.24:15,0,5	0/0:19,0:20:34.25:0,34,173	0/1:7,3:10:11.21:68,0,11	0/1:10,12:23:17.84:176,0,18	0/1:26,9:36:6.24:171,0,6	0/0:21,0:20:20.52:0,21,102	1/1:18,0:22:32.28:184,32,0	1/1:18,1:22:29.93:155,30,0	0/0:18,1:19:0.68:0,1,77	0/0:15,0:14:9.74:0,10,51	0/0:8,0:8:12.15:0,12,51	0/1:9,2:11:3.61:4,0,28	0/1:14,2:17:41.58:42,0,76	1/1:12,0:17:16.46:105,16,0	1/1:14,5:20:0.67:141,1,0	1/1:14,5:18:0.88:85,1,0	0/1:20,14:33:11.06:187,0,11	1/1:4,5:8:14.97:120,15,0	0/1:13,7:19:1.28:73,0,1	0/1:9,3:12:7.93:30,0,8	0/1:15,9:23:4.69:85,0,5	0/1:14,2:21:33.07:33,0,95	0/1:6,11:17:3.71:147,0,4	1/1:16,3:19:0.35:86,0,0	0/1:8,5:13:10.77:18,0,11
chr10	87500113	.	AATGCTCAATGCTCATGCACG	A	6128.56	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.669;DP=829;FS=0.000;HRun=0;HaplotypeScore=424.8578;InbreedingCoeff=0.9747;MQ=86.53;MQ0=0;MQRankSum=-7.779;QD=88.82;ReadPosRankSum=1.836;VQSLOD=3.7031;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,159,11973	1/1:1,7:8:9.03:499,9,0	0/0:30,0:30:81.28:0,81,5031	0/0:26,0:26:66.23:0,66,3547	0/0:31,0:31:84.10:0,84,7516	0/0:29,0:29:84.29:0,84,7373	0/0:46,0:46:99:0,129,9937	0/0:28,0:28:69.22:0,69,5252	0/0:38,0:38:99:0,111,9464	1/1:8,21:29:63.20:3051,63,0	1/1:3,15:18:39.09:1914,39,0	0/0:37,0:37:99:0,108,8647	0/0:33,0:33:93.31:0,93,7617	0/0:41,0:41:99:0,117,9927	0/0:51,0:51:99:0,144,12431	0/0:46,0:46:99:0,129,10392	1/1:6,8:14:12.04:665,12,0	0/0:17,0:17:45.15:0,45,4140	0/0:21,0:21:51.16:0,51,3224	0/0:25,0:25:66.18:0,66,5195	0/0:46,0:46:99:0,135,11274	0/0:19,0:19:51.17:0,51,4416	0/0:15,0:15:39.13:0,39,3327	0/0:26,0:26:69.18:0,69,5825	0/0:19,0:19:54.19:0,54,4350	0/0:32,0:32:90.31:0,90,7520	0/0:34,0:34:96.33:0,96,8287	0/0:11,0:11:33.11:0,33,2996
chr10	87503419	.	G	GAAAAAAGA	2429.16	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.155;DP=520;FS=1.256;HRun=0;HaplotypeScore=124.6307;InbreedingCoeff=0.9666;MQ=57.52;MQ0=2;MQRankSum=0.004;QD=32.83;ReadPosRankSum=-2.351;VQSLOD=3.0229;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.13:0,57,846	1/1:0,7:7:18.02:412,18,0	0/0:16,0:9:11.51:0,12,109	0/0:20,0:9:15.50:0,16,157	0/0:27,0:27:75.21:0,75,1171	0/0:22,0:22:57.16:0,57,903	0/0:17,0:17:45.12:0,45,604	0/0:26,0:26:56.18:0,56,588	0/0:17,0:17:42.12:0,42,647	1/1:2,11:15:36.11:840,36,0	1/1:3,18:25:49:1022,49,0	0/0:16,0:16:39.13:0,39,930	0/0:15,0:15:36.05:0,36,630	0/0:22,0:22:57.15:0,57,857	0/0:11,0:11:27.06:0,27,331	0/0:11,0:11:33.09:0,33,502	1/1:1,21:27:11.83:312,12,0	0/0:22,0:22:55.89:0,56,1028	0/0:18,0:17:42.07:0,42,534	0/0:26,0:26:68.91:0,69,877	0/0:6,0:6:18.05:0,18,242	0/0:13,0:13:33.09:0,33,451	0/0:20,0:20:60.16:0,60,837	0/0:18,0:18:51.14:0,51,840	0/0:24,0:24:24.50:0,25,847	0/0:30,0:32:14.32:0,14,1511	0/0:18,0:18:54.14:0,54,747	0/0:9,0:9:27.09:0,27,602
chr10	87503537	.	GA	G	1446.96	PASS	AB=0.871;AC=20;AF=0.357;AN=56;BaseQRankSum=7.698;DP=531;FS=2.505;HRun=13;HaplotypeScore=67.4539;InbreedingCoeff=0.5109;MQ=63.47;MQ0=32;MQRankSum=0.276;QD=5.63;ReadPosRankSum=5.667;VQSLOD=2.1500;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,1:29:50:0,50,614	1/1:15,0:15:7.73:20,8,0	0/0:21,0:8:5.22:0,5,34	0/0:30,0:12:12.63:0,13,91	0/0:17,1:16:14.13:0,14,291	1/1:3,20:23:11.62:239,12,0	0/1:10,11:23:32.61:191,0,33	0/0:18,1:18:8.84:0,9,334	0/0:14,0:14:23.50:0,24,227	0/1:14,0:12:8.36:20,0,8	1/1:11,0:9:0.70:4,1,0	0/0:16,0:16:35.71:0,36,319	0/0:11,0:11:24.02:0,24,224	0/0:15,1:17:19.90:0,20,322	0/0:16,0:16:36.05:0,36,344	0/0:10,0:11:26.87:0,27,243	0/1:32,0:32:1.69:30,0,2	1/1:8,26:36:19.36:437,19,0	0/1:17,1:18:16.57:17,0,219	0/1:16,2:16:1.81:2,0,291	0/1:8,4:14:44.40:44,0,77	1/1:4,5:8:17.71:123,18,0	1/1:7,10:17:22.83:153,23,0	1/1:1,17:22:52.89:352,53,0	0/0:19,0:17:20.07:0,20,332	0/0:13,1:14:8.94:0,9,221	0/0:20,0:19:33.03:0,33,311	0/0:16,0:13:21.03:0,21,204
chr10	87503547	.	AAAAC	A	1188.88	PASS	AB=0.964;AC=8;AF=0.143;AN=56;BaseQRankSum=3.552;DP=585;FS=0.485;HRun=0;HaplotypeScore=108.6785;InbreedingCoeff=0.8383;MQ=74.71;MQ0=16;MQRankSum=-1.228;QD=10.16;ReadPosRankSum=-2.768;VQSLOD=2.3326;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:80.98:0,81,1589	1/1:10,1:11:20.81:166,21,0	0/1:34,0:22:1.31:1,0,274	0/0:37,0:22:31.89:0,32,409	0/0:18,0:17:42.13:0,42,851	0/0:30,0:29:59.84:0,60,739	0/0:24,0:24:62.83:0,63,744	0/0:22,0:22:66.14:0,66,1098	0/0:14,0:14:36.03:0,36,664	1/1:18,3:20:46.68:418,47,0	0/1:12,1:12:0.24:112,0,0	0/0:14,0:14:32.43:0,32,798	0/0:12,0:12:30.01:0,30,598	0/0:20,0:20:57.14:0,57,1006	0/0:16,0:16:42.06:0,42,795	0/0:11,0:11:29.92:0,30,568	1/1:32,6:38:76.66:639,77,0	0/0:41,0:40:89.14:0,89,1089	0/0:19,0:18:50.94:0,51,808	0/0:26,0:25:58.10:0,58,1101	0/0:15,0:15:22.53:0,23,430	0/0:9,0:9:20.95:0,21,216	0/0:13,0:13:26.46:0,26,274	0/0:27,0:26:71.57:0,72,755	0/0:20,0:18:49.26:0,49,961	0/0:16,0:16:40.73:0,41,722	0/0:20,0:19:47.89:0,48,816	0/0:12,0:10:30.03:0,30,498
chr10	87503548	.	AAAC	A	1805.01	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=2.027;DP=587;FS=4.812;HRun=0;HaplotypeScore=97.1195;InbreedingCoeff=0.8774;MQ=75.44;MQ0=14;MQRankSum=-2.587;QD=15.17;ReadPosRankSum=-2.484;VQSLOD=2.6461;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:80.93:0,81,1282	1/1:1,10:11:21.03:269,21,0	0/1:33,0:22:8.32:8,0,212	0/0:38,0:23:35.08:0,35,323	0/0:18,0:17:42.10:0,42,685	0/0:30,0:29:49.34:0,49,500	0/0:24,0:24:59.19:0,59,524	0/0:22,0:22:65.95:0,66,868	0/0:14,0:14:35.95:0,36,526	1/1:17,3:20:55.81:509,56,0	1/1:10,3:12:23.41:186,23,0	0/0:14,0:14:31.60:0,32,644	0/0:12,0:12:29.99:0,30,484	0/0:20,0:20:57.10:0,57,798	0/0:16,0:16:42.02:0,42,639	0/0:11,0:11:29.90:0,30,456	1/1:31,10:41:95.91:995,96,0	0/0:41,0:40:52.18:0,52,724	0/0:18,0:18:48.37:0,48,633	0/0:26,0:25:56.30:0,56,899	0/0:16,0:16:23.57:0,24,349	0/0:8,0:8:19.18:0,19,139	0/0:13,0:13:19.78:0,20,162	0/0:27,0:26:64.12:0,64,485	0/0:20,0:18:49.24:0,49,784	0/0:16,0:16:28.12:0,28,583	0/0:20,0:19:47.85:0,48,677	0/0:12,0:10:30.02:0,30,410
chr10	87503550	.	AC	A	1532.30	PASS	AB=0.974;AC=13;AF=0.232;AN=56;BaseQRankSum=4.817;DP=575;FS=9.415;HRun=1;HaplotypeScore=77.3162;InbreedingCoeff=0.5227;MQ=77.59;MQ0=5;MQRankSum=-3.975;QD=7.44;ReadPosRankSum=-0.997;VQSLOD=-0.3872;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:79.87:0,80,736	1/1:11,0:11:20.86:153,21,0	0/1:34,0:22:9.16:9,0,161	0/0:40,0:25:15.24:0,15,165	0/0:18,0:18:42.85:0,43,402	0/0:29,0:29:13.31:0,13,180	0/0:21,0:21:16.80:0,17,191	0/0:23,0:23:53.33:0,53,489	0/0:13,0:13:20.62:0,21,284	1/1:20,1:21:59.68:496,60,0	1/1:11,0:11:26.83:205,27,0	0/0:12,0:12:36.06:0,36,370	0/0:13,0:13:31.83:0,32,288	0/0:20,0:20:52.80:0,53,437	0/0:15,0:15:44.84:0,45,391	0/0:11,0:11:29.53:0,30,257	1/1:39,0:39:98.49:754,98,0	0/1:41,1:41:3.70:4,0,221	0/0:18,0:18:9.77:0,10,343	0/0:23,1:24:42.62:0,43,544	0/0:15,0:15:13.83:0,14,211	0/1:8,0:8:7.33:7,0,21	0/1:12,1:13:23.89:49,0,24	0/1:26,1:26:29.96:30,0,109	0/0:18,0:18:48.72:0,49,468	0/0:18,0:18:21.61:0,22,388	0/0:19,0:19:47.48:0,47,432	0/0:11,0:10:29.76:0,30,250
chr10	87503698	.	G	GT	8537.67	PASS	AB=0.929;AC=21;AF=0.375;AN=56;BaseQRankSum=-12.032;DP=582;FS=3.307;HRun=0;HaplotypeScore=61.0774;InbreedingCoeff=0.9216;MQ=83.34;MQ0=0;MQRankSum=-3.161;QD=36.33;ReadPosRankSum=1.530;VQSLOD=4.7056;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1425	1/1:0,7:7:18.06:288,18,0	0/0:21,0:21:63.10:0,63,787	0/0:13,0:13:19.05:0,19,387	0/0:12,0:12:33.11:0,33,461	1/1:2,26:28:75.26:1199,75,0	1/1:4,25:29:72.16:1095,72,0	0/0:30,0:30:90.28:0,90,1226	0/0:20,0:20:60.20:0,60,839	1/1:0,21:21:57.17:866,57,0	1/1:3,10:14:30.10:467,30,0	0/0:16,0:16:48.14:0,48,652	0/0:20,0:20:57.19:0,57,796	0/0:15,0:15:45.14:0,45,608	0/0:27,0:27:78.24:0,78,1072	0/0:24,0:24:69.23:0,69,963	1/1:0,33:33:87.30:1391,87,0	1/1:0,20:20:54.18:863,54,0	0/0:21,0:20:57.17:0,57,792	0/0:18,0:18:48.16:0,48,670	0/0:20,0:20:57.19:0,57,797	1/1:1,11:12:24.08:383,24,0	1/1:0,14:14:39.13:623,39,0	1/1:1,30:31:84.29:1343,84,0	0/0:8,0:8:24.08:0,24,335	0/1:24,2:26:20.72:21,0,889	0/0:27,0:27:75.25:0,75,1048	0/0:19,0:19:57.19:0,57,787
chr10	87504028	.	ACGCGCG	A	3754.15	PASS	AB=0.773;AC=21;AF=0.375;AN=56;BaseQRankSum=6.443;DP=516;FS=4.595;HRun=0;HaplotypeScore=142.3434;InbreedingCoeff=0.8231;MQ=56.30;MQ0=4;MQRankSum=-7.270;QD=21.21;ReadPosRankSum=2.387;VQSLOD=3.2754;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:42.09:0,42,949	1/1:1,1:3:9.03:156,9,0	0/0:20,0:13:23.63:0,24,308	0/1:12,0:13:24.59:25,0,187	0/0:8,0:8:21.07:0,21,648	1/1:3,4:7:6.01:73,6,0	1/1:4,21:25:35.37:741,35,0	0/0:9,0:9:21.06:0,21,412	0/0:16,0:16:42.14:0,42,1342	1/1:17,2:18:24.97:645,25,0	1/1:7,2:9:11.49:166,11,0	0/0:29,0:29:12.88:0,13,1693	0/0:16,0:16:48.15:0,48,1390	0/0:17,0:17:48.16:0,48,1390	0/0:17,0:17:27.08:0,27,569	0/0:11,0:11:33.06:0,33,804	1/1:25,5:31:56.18:849,56,0	1/1:6,11:18:33.41:784,33,0	0/0:13,0:13:31.31:0,31,709	0/0:18,0:18:45.15:0,45,1211	0/0:67,0:67:99:0,177,4796	1/1:7,6:13:3.01:68,3,0	1/1:7,5:12:6.02:125,6,0	1/1:5,17:22:6.49:122,6,0	0/0:15,0:15:42.14:0,42,1258	0/0:18,0:18:48.16:0,48,1482	0/0:22,0:22:62.80:0,63,1623	0/0:8,0:8:9.03:0,9,265
chr10	87504032	.	GCGCGCGCACACACACA	G	2151.87	PASS	AB=0.982;AC=16;AF=0.286;AN=56;BaseQRankSum=3.762;DP=500;FS=7.982;HRun=0;HaplotypeScore=224.5696;InbreedingCoeff=0.3759;MQ=55.11;MQ0=6;MQRankSum=-6.672;QD=13.37;ReadPosRankSum=-0.148;VQSLOD=1.6171;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:42.09:0,42,1455	0/1:3,0:3:24.78:25,0,64	0/0:16,0:9:23.63:0,24,331	0/1:14,0:11:24.57:25,0,213	0/0:8,0:8:20.85:0,21,1039	1/1:6,0:6:6.01:73,6,0	1/1:25,0:25:35.29:643,35,0	0/0:10,0:9:27.08:0,27,915	0/0:15,0:15:42.14:0,42,2681	0/1:17,0:15:99:180,0,331	0/1:8,0:8:56.42:56,0,93	0/0:26,0:26:35.69:0,36,3267	0/0:16,0:16:48.15:0,48,2578	0/0:18,0:18:51.18:0,51,2806	0/0:18,0:18:27.08:0,27,1440	0/0:11,0:11:33.06:0,33,1690	0/1:31,0:31:99:215,0,590	0/1:15,2:17:65.62:707,0,66	0/0:13,0:13:37.76:0,38,1355	0/0:16,0:16:45.15:0,45,2234	0/0:67,0:67:99:0,183,8782	1/1:8,1:9:2.32:67,2,0	1/1:8,2:10:6.91:207,7,0	1/1:19,1:20:8.49:128,8,0	0/0:16,0:16:48.16:0,48,2606	0/0:21,0:20:60.20:0,60,3296	0/0:25,0:25:64.77:0,65,3030	0/0:8,0:8:15.05:0,15,851
chr10	87504036	.	G	GCA	136.01	PASS	AB=0.938;AC=7;AF=0.125;AN=56;BaseQRankSum=3.356;DP=496;FS=10.997;HRun=0;HaplotypeScore=122.7963;InbreedingCoeff=0.2133;MQ=53.24;MQ0=8;MQRankSum=-0.089;QD=1.39;ReadPosRankSum=1.338;VQSLOD=1.9524;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:23.65:0,24,284	0/1:5,0:5:0.59:1,0,10	0/0:13,0:6:8.97:0,9,84	0/0:10,0:7:10.28:0,10,56	0/0:9,0:9:27.02:0,27,339	0/1:5,0:5:0:0,0,0	0/1:23,0:23:1.33:1,0,59	0/0:12,0:10:26.36:0,26,264	0/0:14,0:14:39.13:0,39,573	0/0:17,0:15:6.98:0,7,92	0/0:8,0:8:6.71:0,7,33	0/0:25,0:25:62.67:0,63,843	0/0:15,0:15:43.68:0,44,594	0/0:19,0:19:54.09:0,54,735	0/1:4,14:18:42.48:209,0,42	0/0:10,0:10:26.81:0,27,335	0/0:30,0:30:14.26:0,14,162	0/1:18,0:18:2.31:2,0,97	0/0:14,0:14:32.07:0,32,393	0/0:17,0:17:39.06:0,39,513	0/0:70,0:69:99:0,165,2183	0/1:8,0:8:0:0,0,0	0/0:8,0:8:3.31:0,3,15	0/1:21,0:21:0.41:0,0,1	0/0:18,0:18:51.09:0,51,687	0/0:22,0:21:57.02:0,57,735	0/0:26,0:26:64:0,64,814	0/0:8,0:8:14.99:0,15,169
chr10	87504038	.	G	GCA	246.67	PASS	AB=0.951;AC=9;AF=0.188;AN=48;BaseQRankSum=1.201;DP=478;FS=0.866;HRun=0;HaplotypeScore=116.0809;InbreedingCoeff=-0.1003;MQ=52.73;MQ0=8;MQRankSum=1.703;QD=1.70;ReadPosRankSum=0.037;VQSLOD=2.3679;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:6,20:28:26.11:85,0,26	0/1:5,0:5:3.11:3,0,7	./.	./.	0/0:9,0:9:14.98:0,15,147	./.	0/0:22,0:22:16.24:0,16,83	0/0:12,0:10:3.51:0,4,96	0/0:14,0:15:22.21:0,22,340	0/1:16,0:14:22.18:22,0,47	0/0:8,0:8:5.77:0,6,31	0/0:22,0:24:13.57:0,14,363	0/1:13,0:14:15.39:15,0,265	0/0:19,0:19:44.88:0,45,463	0/1:18,0:18:22.12:210,0,22	0/1:9,0:10:1.02:1,0,185	0/0:29,0:29:27.19:0,27,159	0/1:18,0:18:18.89:19,0,106	0/0:15,0:15:14.02:0,14,163	0/1:14,0:15:3.60:4,0,229	0/0:63,0:64:99:0,104,1069	./.	0/0:8,0:8:2.84:0,3,14	0/1:20,0:20:0:0,0,0	0/0:19,0:19:41.74:0,42,397	0/0:18,0:21:40.13:0,40,501	0/0:26,0:26:15.02:0,15,311	0/0:8,0:8:14.95:0,15,134
chr10	87504060	.	ACG	A	504.09	PASS	AB=0.926;AC=17;AF=0.315;AN=54;BaseQRankSum=8.293;DP=497;FS=2.533;HRun=0;HaplotypeScore=130.2111;InbreedingCoeff=0.1708;MQ=50.12;MQ0=10;MQRankSum=-2.737;QD=2.71;ReadPosRankSum=0.777;VQSLOD=2.7200;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:22.13:0,22,194	1/1:1,6:7:5.34:43,5,0	./.	0/0:7,0:3:5.96:0,6,44	0/0:12,0:11:0.05:0,0,240	1/1:6,0:6:2.94:18,3,0	0/1:28,0:28:13.29:13,0,60	0/0:11,0:9:3.63:0,4,166	0/0:16,0:16:28.20:0,28,578	0/1:12,1:12:13.20:151,0,13	0/1:8,0:8:16.17:16,0,22	0/0:20,0:20:3.06:0,3,580	0/0:12,0:12:21.37:0,21,494	0/0:18,0:18:25.41:0,25,685	0/0:17,0:17:7.08:0,7,251	0/1:10,1:11:22.69:23,0,341	0/1:13,17:30:18.82:196,0,19	0/1:24,0:24:82.13:102,0,82	0/0:15,0:15:24.53:0,25,341	0/1:16,0:16:18.19:18,0,396	0/0:64,0:62:99:0,112,1816	1/1:13,0:13:5.84:34,6,0	1/1:9,0:9:5.77:30,6,0	1/1:21,0:21:2.92:18,3,0	0/0:17,0:17:37.90:0,38,674	0/0:27,0:26:27.86:0,28,767	0/0:26,0:26:44.77:0,45,750	0/0:11,2:13:14.16:0,14,317
chr10	87504062	.	GCA	G	263.90	PASS	AB=0.866;AC=12;AF=0.222;AN=54;BaseQRankSum=7.752;DP=485;FS=2.818;HRun=0;HaplotypeScore=130.6610;InbreedingCoeff=0.3880;MQ=50.60;MQ0=9;MQRankSum=-6.654;QD=2.00;ReadPosRankSum=2.769;VQSLOD=2.6005;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:27.05:0,27,381	0/1:7,0:7:10.42:10,0,11	./.	0/0:8,0:4:9.03:0,9,157	0/0:11,0:10:21.05:0,21,350	1/1:4,2:6:3.01:31,3,0	0/1:16,10:26:40.34:40,0,107	0/0:11,0:9:20.09:0,20,305	0/0:16,0:16:41.96:0,42,688	0/0:13,0:13:3.61:0,4,135	0/0:9,0:9:6.40:0,6,80	0/0:18,0:18:40.34:0,40,690	0/0:12,0:12:34.67:0,35,596	0/0:18,0:18:36.72:0,37,718	0/0:17,0:17:27.96:0,28,434	0/0:13,0:13:16.07:0,16,491	0/1:30,0:30:10.70:11,0,177	0/1:14,8:23:99:188,0,245	0/0:15,0:15:28.84:0,29,415	0/0:15,0:15:38.32:0,38,594	0/0:62,0:60:99:0,150,2374	1/1:6,7:13:5.95:49,6,0	1/1:5,4:9:5.60:44,6,0	1/1:13,5:18:2.76:36,3,0	0/0:17,0:17:41.99:0,42,710	0/0:27,0:26:63.02:0,63,995	0/0:25,0:25:62.86:0,63,996	0/0:13,0:13:21.98:0,22,452
chr10	87504064	.	ACG	A	448.87	PASS	AB=0.977;AC=13;AF=0.232;AN=56;BaseQRankSum=8.928;DP=484;FS=2.205;HRun=0;HaplotypeScore=125.9179;InbreedingCoeff=0.1869;MQ=50.65;MQ0=9;MQRankSum=-4.475;QD=2.86;ReadPosRankSum=1.158;VQSLOD=2.6346;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:30.02:0,30,498	0/1:7,0:7:19.16:28,0,19	0/0:4,0:2:6.02:0,6,77	0/0:10,0:6:15:0,15,219	0/0:11,0:10:24.01:0,24,390	1/1:7,0:7:2.92:17,3,0	0/1:27,0:27:14.93:15,0,77	0/0:11,0:9:21.06:0,21,361	0/0:17,0:17:45.10:0,45,755	0/1:11,0:11:38.79:116,0,39	0/1:10,0:10:27.09:57,0,27	0/0:17,0:17:42.06:0,42,719	0/0:13,0:13:36.58:0,37,644	0/0:17,0:17:41.49:0,41,703	0/0:17,0:17:30.07:0,30,521	0/0:13,0:13:5.65:0,6,550	0/1:28,1:29:71.57:170,0,72	0/1:21,2:23:99:117,0,163	0/0:14,0:14:31.70:0,32,454	0/0:14,0:14:39.12:0,39,669	0/0:64,0:62:99:0,150,2619	1/1:13,1:14:5.74:30,6,0	1/1:7,2:9:5.90:42,6,0	0/1:19,1:20:8.72:11,0,9	0/0:15,0:15:39.13:0,39,717	0/0:25,0:24:43.63:0,44,1031	0/0:21,0:21:54.18:0,54,1011	0/0:12,0:12:21.84:0,22,510
chr10	87504078	.	GCGCGCACGCACGCACA	G	944.38	PASS	AB=0.947;AC=12;AF=0.214;AN=56;BaseQRankSum=6.773;DP=468;FS=2.080;HRun=0;HaplotypeScore=218.1923;InbreedingCoeff=0.6585;MQ=55.69;MQ0=9;MQRankSum=-5.934;QD=11.38;ReadPosRankSum=-2.698;VQSLOD=2.4440;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:48.89:0,49,1245	0/0:6,0:6:2.67:0,3,46	0/0:11,0:8:23.55:0,24,544	0/0:15,0:12:36.09:0,36,989	0/0:14,0:13:33.11:0,33,1560	1/1:4,0:4:1.55:4,2,0	1/1:25,0:25:29.71:312,30,0	0/0:17,0:15:27.11:0,27,556	0/0:15,0:15:45.15:0,45,2544	0/0:17,0:17:29.65:0,30,617	0/1:9,0:9:15.08:15,0,50	0/0:16,0:16:42.14:0,42,2262	0/0:13,0:13:36.92:0,37,1859	0/0:22,0:22:60.21:0,60,3145	0/0:20,0:20:38.74:0,39,1664	0/0:14,0:14:39.02:0,39,1771	0/0:23,0:23:12.58:0,13,323	0/1:15,2:17:10.06:438,0,10	0/0:13,0:13:28.34:0,28,1124	0/0:11,0:11:30.06:0,30,1289	0/0:55,0:53:99:0,110,5974	1/1:9,1:10:8.55:85,9,0	1/1:5,2:7:4.83:130,5,0	1/1:10,1:11:10.43:116,10,0	0/0:15,0:15:39.13:0,39,2102	0/0:22,0:22:60.18:0,60,2459	0/0:19,0:19:57.15:0,57,2512	0/0:12,0:12:33.11:0,33,1916
chr10	87505887	.	AGAACC	A	2090.19	PASS	AB=0.878;AC=22;AF=0.393;AN=56;BaseQRankSum=5.776;DP=487;FS=45.816;HRun=0;HaplotypeScore=86.0560;InbreedingCoeff=-0.4680;MQ=31.07;MQ0=60;MQRankSum=-1.706;QD=6.13;ReadPosRankSum=-1.970;VQSLOD=-0.0994;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,1:26:99:146,0,390	0/1:4,1:6:8.97:119,0,9	0/0:26,0:2:2.92:0,3,17	0/0:49,0:5:7.74:0,8,123	0/1:21,0:21:99:148,0,117	0/1:10,6:14:57.93:261,0,58	0/1:9,6:12:99:339,0,104	0/1:18,7:21:99:141,0,479	0/0:8,0:4:4.46:0,4,112	0/1:11,2:11:53.34:87,0,53	0/1:20,1:24:99:148,0,106	0/1:10,0:7:25.94:26,0,129	0/0:6,0:6:2.45:0,2,78	0/1:9,1:9:25.96:26,0,79	0/0:6,1:7:10.37:0,10,121	0/0:11,0:11:30.97:0,31,308	0/1:11,1:11:56:56,0,154	0/1:16,1:12:94.29:94,0,236	0/1:21,1:23:23.97:24,0,562	0/1:17,1:14:99:120,0,215	0/1:9,0:6:5.78:6,0,71	1/1:4,6:9:0.37:199,0,0	0/1:8,2:9:25.55:82,0,26	1/1:13,2:9:3.99:98,4,0	0/0:16,0:13:8.99:0,9,124	0/0:18,0:18:16.05:0,16,431	0/1:20,0:19:32.13:32,0,383	0/1:29,0:19:91.32:91,0,246
chr10	87505891	.	CCA	C	635.67	PASS	AB=0.959;AC=26;AF=0.464;AN=56;BaseQRankSum=8.484;DP=500;FS=44.668;HRun=0;HaplotypeScore=74.1844;InbreedingCoeff=-0.5413;MQ=33.07;MQ0=67;MQRankSum=-2.660;QD=1.57;ReadPosRankSum=2.492;VQSLOD=-0.1664;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,1:25:79.34:79,0,115	1/1:6,0:6:5.75:37,6,0	0/1:31,0:3:0.86:1,0,11	0/0:53,0:6:0.57:0,1,35	0/1:20,0:20:47.67:53,0,48	0/1:16,0:14:23.90:56,0,24	0/1:13,0:12:31.18:101,0,31	0/1:26,0:22:8.48:8,0,217	0/1:8,0:4:7.04:7,0,39	0/1:15,0:12:23.22:30,0,23	0/1:26,0:24:33.21:33,0,54	0/1:10,0:6:0.37:0,0,56	0/1:6,0:6:11.63:26,0,12	0/1:9,0:9:13.93:14,0,39	0/1:7,0:7:8.87:9,0,33	0/1:13,1:14:13.18:13,0,109	0/0:14,0:11:0.29:0,0,73	0/1:16,1:12:15.07:15,0,82	0/1:23,1:24:31.27:31,0,254	0/1:13,3:13:43.86:60,0,44	0/0:10,0:6:4.62:0,5,23	0/1:10,0:9:0.40:57,0,0	0/1:10,0:9:8.30:58,0,8	1/1:17,0:11:5.51:33,6,0	0/1:15,1:13:6.12:6,0,35	0/0:17,1:16:6.10:0,6,186	0/1:19,1:18:25.25:25,0,147	0/1:30,0:18:24.49:24,0,106
chr10	87505902	.	A	ACC	46.15	PASS	AB=0.907;AC=4;AF=0.071;AN=56;BaseQRankSum=3.406;DP=521;FS=0.000;HRun=0;HaplotypeScore=85.5704;InbreedingCoeff=-0.0886;MQ=38.28;MQ0=65;MQRankSum=-0.854;QD=0.60;ReadPosRankSum=-1.109;VQSLOD=1.5216;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:25:60.19:0,60,815	0/1:6,3:9:48.73:49,0,113	0/1:36,0:4:3.29:3,0,42	0/0:49,0:8:2.68:0,3,107	0/0:22,0:21:56.39:0,56,718	0/0:12,0:11:24.07:0,24,295	0/0:11,0:8:21.52:0,22,249	0/0:28,0:26:66.49:0,66,835	0/0:6,0:3:9.03:0,9,110	0/1:18,1:15:77.03:77,0,208	0/0:24,0:23:28.52:0,29,376	0/0:12,0:9:24.07:0,24,326	0/0:5,0:5:9.03:0,9,123	0/0:8,0:8:18.06:0,18,253	0/0:8,0:8:21.06:0,21,281	0/0:14,0:14:39.13:0,39,522	0/1:12,1:10:18.30:18,0,84	0/0:19,0:14:36.12:0,36,490	0/0:28,0:24:63.18:0,63,834	0/0:17,0:14:33.05:0,33,419	0/0:10,0:6:15.05:0,15,208	0/0:13,0:12:22.57:0,23,233	0/0:12,0:11:30.06:0,30,372	0/0:17,0:12:4.93:0,5,39	0/0:19,0:16:33.09:0,33,419	0/0:27,0:24:60.19:0,60,822	0/0:24,0:22:56.67:0,57,749	0/0:31,0:21:54.17:0,54,731
chr10	87506064	.	TTA	T	3515.73	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=11.938;DP=520;FS=7.474;HRun=0;HaplotypeScore=71.7342;InbreedingCoeff=0.8631;MQ=73.45;MQ0=4;MQRankSum=1.078;QD=19.86;ReadPosRankSum=4.140;VQSLOD=3.5174;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.17:0,66,1114	0/1:9,0:9:2.56:3,0,52	0/0:29,0:17:45.73:0,46,480	0/0:24,0:10:8.77:0,9,145	0/0:28,0:28:84.13:0,84,1316	1/1:0,35:34:72.24:1026,72,0	1/1:0,17:17:21.07:299,21,0	0/0:32,0:32:96.21:0,96,1595	0/0:11,0:11:33.07:0,33,478	1/1:21,0:21:32.80:143,33,0	0/1:21,0:21:8.18:29,0,8	0/0:13,0:12:36.09:0,36,577	0/0:14,0:14:39.11:0,39,689	0/0:13,0:13:33.10:0,33,582	0/0:12,0:12:33.10:0,33,568	0/0:19,0:19:54.11:0,54,920	1/1:20,0:20:17.75:45,18,0	1/1:0,11:11:24.08:342,24,0	0/0:21,0:21:63.14:0,63,978	0/0:17,0:17:50.91:0,51,803	0/0:12,0:12:36.11:0,36,639	1/1:0,11:11:29.96:381,30,0	1/1:0,20:21:62.95:864,63,0	1/1:0,11:11:27.09:384,27,0	0/0:8,0:8:24.07:0,24,416	0/0:32,0:31:88.97:0,89,1527	0/0:22,0:22:63.17:0,63,1054	0/0:13,0:13:36.05:0,36,540
chr10	87506065	.	TA	T	3104.73	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=11.498;DP=523;FS=5.188;HRun=4;HaplotypeScore=63.9521;InbreedingCoeff=0.9934;MQ=75.71;MQ0=4;MQRankSum=1.133;QD=17.54;ReadPosRankSum=3.646;VQSLOD=3.0136;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.13:0,63,776	1/1:2,7:9:18.05:215,18,0	0/0:29,0:18:42.47:0,42,391	0/0:26,0:12:13.28:0,13,158	0/0:28,0:28:68.66:0,69,903	1/1:35,0:34:70.10:400,70,0	1/1:17,0:17:20.45:117,20,0	0/0:32,0:32:93.22:0,93,1142	0/0:11,0:11:33.06:0,33,367	1/1:1,21:21:63.13:707,63,0	1/1:3,17:20:35.07:444,35,0	0/0:13,0:12:33.08:0,33,404	0/0:14,0:14:39.11:0,39,497	0/0:13,0:13:33.09:0,33,418	0/0:12,0:12:33.09:0,33,409	0/0:19,0:19:53.19:0,53,650	1/1:0,20:20:54.17:642,54,0	1/1:11,0:11:23.40:134,23,0	0/0:21,0:21:57.10:0,57,668	0/0:17,0:17:48.09:0,48,569	0/0:12,0:12:36.10:0,36,459	1/1:11,0:11:29.28:173,29,0	1/1:21,0:21:61.11:344,61,0	1/1:11,0:11:26.28:150,26,0	0/0:8,0:8:24.07:0,24,302	0/0:33,1:33:51.49:0,51,1016	0/0:22,0:22:63.14:0,63,765	0/0:10,0:11:27.95:0,28,340
chr10	87506722	.	AAAAC	A	4373.20	PASS	AB=0.986;AC=32;AF=0.571;AN=56;BaseQRankSum=10.634;DP=677;FS=3.963;HRun=0;HaplotypeScore=127.5998;InbreedingCoeff=0.7876;MQ=53.32;MQ0=20;MQRankSum=-5.839;QD=11.98;ReadPosRankSum=-0.900;VQSLOD=4.3099;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:58:84.29:0,84,1455	1/1:10,0:10:8.80:69,9,0	0/0:26,0:8:6.02:0,6,129	0/0:29,0:15:6.49:0,6,133	0/0:22,0:22:33.11:0,33,754	1/1:9,0:9:6.01:56,6,0	1/1:24,0:24:21.02:195,21,0	0/0:29,0:26:18.04:0,18,349	0/0:27,1:28:9.90:0,10,1172	1/1:25,0:25:35.81:335,36,0	1/1:28,0:28:35.90:331,36,0	1/1:6,11:17:24.08:378,24,0	1/1:7,15:22:30.07:446,30,0	1/1:12,15:27:36.12:567,36,0	0/0:34,0:34:57.20:0,57,1279	0/0:30,0:30:51.18:0,51,1191	1/1:26,0:26:27.03:250,27,0	1/1:19,0:19:9.01:84,9,0	1/1:13,6:17:18.02:256,18,0	1/1:9,12:20:30.10:473,30,0	0/0:36,0:36:63.22:0,63,1406	0/1:18,0:18:10.52:22,0,11	1/1:16,0:16:8.01:64,8,0	1/1:33,0:33:24.02:222,24,0	0/0:9,0:9:18.06:0,18,422	0/1:33,1:34:8.98:9,0,1266	1/1:3,14:17:39.13:615,39,0	0/0:10,0:10:21.06:0,21,453
chr10	87506754	.	CAAACAAAT	C	6422.22	PASS	AB=0.742;AC=20;AF=0.357;AN=56;BaseQRankSum=7.665;DP=646;FS=0.000;HRun=0;HaplotypeScore=158.5076;InbreedingCoeff=0.8242;MQ=56.43;MQ0=11;MQRankSum=-8.421;QD=27.21;ReadPosRankSum=0.888;VQSLOD=4.5015;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:57:99:0,130,3877	1/1:0,5:5:14.94:307,15,0	0/0:18,0:5:4.40:0,4,299	0/0:23,0:9:4.40:0,4,287	0/0:17,0:17:51.08:0,51,1670	1/1:0,10:10:6.02:179,6,0	1/1:0,24:24:21.07:624,21,0	0/0:25,0:24:70.03:0,70,1433	0/0:23,0:23:69.19:0,69,2542	1/1:0,21:21:63.12:1365,63,0	1/1:0,20:20:54.07:1239,54,0	0/0:18,0:18:43.50:0,44,451	0/0:20,0:20:31.05:0,31,473	0/0:22,0:22:57.03:0,57,686	0/0:36,0:36:99:0,108,2976	0/0:25,0:25:75.17:0,75,2471	1/1:0,33:33:26.72:800,27,0	0/1:1,19:20:0.52:308,0,1	0/0:21,0:20:59.92:0,60,624	0/0:17,0:16:48.04:0,48,585	0/0:36,0:36:99:0,108,3289	1/1:0,17:17:35.50:340,35,0	1/1:0,23:23:29.54:502,30,0	1/1:1,28:29:14.95:744,15,0	0/0:11,0:11:33.04:0,33,933	0/1:33,1:34:13.33:13,0,2942	0/0:24,0:24:69.08:0,69,798	0/0:16,0:16:43.93:0,44,1065
chr10	87508720	.	GACACACACACACAC	G	2395.69	PASS	AB=0.844;AC=19;AF=0.352;AN=54;BaseQRankSum=6.233;DP=562;FS=0.888;HRun=0;HaplotypeScore=204.2740;InbreedingCoeff=0.5021;MQ=68.59;MQ0=16;MQRankSum=-4.726;QD=10.33;ReadPosRankSum=0.031;VQSLOD=2.7184;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:15.05:0,15,296	0/0:5,0:5:6.02:0,6,106	0/0:28,0:23:2.22:0,2,7	0/0:32,0:28:1.82:0,2,5	0/0:14,0:15:12.04:0,12,635	1/1:13,1:16:12.04:352,12,0	./.	1/1:26,0:26:1.50:24,1,0	0/0:17,0:17:18.50:0,18,847	0/0:22,0:24:9.36:0,9,350	0/1:6,0:11:34.05:62,0,34	0/0:25,0:23:27.09:0,27,1278	0/0:25,0:24:32.60:0,33,1598	0/0:14,0:14:18.06:0,18,1027	0/0:26,0:26:40:0,40,1941	0/0:17,0:19:30.10:0,30,1670	0/1:17,0:22:43.68:44,0,222	0/1:14,0:16:0:0,0,0	0/0:11,0:11:2.22:0,2,7	0/0:16,4:18:0:0,0,0	1/1:40,1:41:8.57:74,9,0	1/1:9,8:17:15.05:448,15,0	1/1:13,1:15:5.71:184,6,0	1/1:16,4:20:9.03:351,9,0	0/0:10,0:12:12.04:0,12,549	0/1:19,1:22:13.08:429,0,13	1/1:12,3:19:13.71:593,14,0	0/1:4,0:4:0.01:0,0,0
chr10	87509971	.	CTTCT	C	54.11	PASS	AB=0.952;AC=9;AF=0.161;AN=56;BaseQRankSum=5.087;DP=386;FS=5.513;HRun=0;HaplotypeScore=67.4216;InbreedingCoeff=-0.0955;MQ=64.30;MQ0=3;MQRankSum=0.699;QD=0.47;ReadPosRankSum=3.322;VQSLOD=0.5952;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:30.16:0,30,364	0/1:9,0:9:1.34:1,0,73	0/0:24,0:11:14.01:0,14,151	0/0:15,0:8:8.88:0,9,113	0/0:13,0:13:28.04:0,28,269	0/0:10,0:10:17.64:0,18,131	0/1:9,0:8:15.63:16,0,63	0/0:29,0:27:38.61:0,39,400	0/1:8,0:8:0.05:0,0,0	0/1:10,5:15:14.38:14,0,183	0/1:16,0:16:22.80:23,0,118	0/0:14,0:14:23.73:0,24,226	0/0:5,0:5:8.80:0,9,101	0/0:10,0:10:16.29:0,16,119	0/0:15,0:15:26.88:0,27,253	0/0:15,0:15:34.25:0,34,316	0/1:20,1:20:52.42:52,0,73	0/1:12,1:13:22.03:22,0,125	0/0:18,0:18:37.72:0,38,350	0/0:12,0:12:21.64:0,22,186	0/0:12,0:12:26.95:0,27,331	0/0:3,0:3:5.90:0,6,41	0/1:14,0:15:45.78:46,0,109	0/1:9,0:9:2.25:2,0,19	0/0:18,0:18:30.03:0,30,391	0/0:9,0:9:19.10:0,19,273	0/0:18,0:16:25.76:0,26,363	0/0:7,0:6:14.95:0,15,118
chr10	87510971	.	CT	C	4000.18	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.027;DP=638;FS=0.377;HRun=3;HaplotypeScore=120.0852;InbreedingCoeff=0.9982;MQ=95.43;MQ0=4;MQRankSum=-14.933;QD=27.97;ReadPosRankSum=2.105;VQSLOD=2.8774;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1558	1/1:0,11:10:27.08:319,27,0	0/0:37,0:37:99:0,105,1423	0/0:28,0:28:57.59:0,58,767	0/0:18,0:18:54.18:0,54,774	1/1:0,15:13:36.11:435,36,0	1/1:0,17:16:45.14:535,45,0	0/0:33,0:33:99:0,99,1422	0/0:16,0:16:45.15:0,45,644	1/1:2,13:14:42.11:487,42,0	1/1:0,18:17:36.11:430,36,0	0/0:31,0:31:93.31:0,93,1335	0/0:21,0:21:60.19:0,60,848	0/0:33,0:33:96.32:0,96,1382	0/0:38,0:38:99:0,108,1533	0/0:42,0:42:99:0,120,1725	1/1:1,14:14:30.08:359,30,0	1/1:0,10:10:30.09:361,30,0	0/0:16,0:16:42.14:0,42,601	0/0:23,0:23:69.18:0,69,952	0/0:29,0:29:87.29:0,87,1248	1/1:1,10:11:30.09:361,30,0	1/1:0,20:19:45.14:533,45,0	1/1:3,8:11:17.73:180,18,0	0/0:22,0:22:66.16:0,66,889	0/0:31,0:31:90.29:0,90,1280	0/0:30,0:30:81.26:0,81,1145	0/0:10,0:10:30.10:0,30,432
chr10	87510979	.	TA	T	876.64	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.334;DP=630;FS=0.000;HRun=2;HaplotypeScore=128.4134;InbreedingCoeff=0.9769;MQ=92.47;MQ0=5;MQRankSum=-12.183;QD=6.74;ReadPosRankSum=3.851;VQSLOD=0.8755;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1506	1/1:4,7:10:17.63:106,18,0	0/0:38,0:37:99:0,99,1438	0/0:24,1:25:15.58:0,16,743	0/0:18,0:18:54.18:0,54,808	1/1:7,6:11:11.75:70,12,0	1/1:7,9:15:25.45:143,25,0	0/0:34,0:34:99:0,99,1483	0/0:19,0:19:57.13:0,57,791	1/1:4,9:12:26.08:164,26,0	1/1:8,9:16:25.03:129,25,0	0/0:30,0:30:90.29:0,90,1329	0/0:22,0:22:66.20:0,66,966	0/0:31,0:31:84.28:0,84,1259	0/0:38,0:38:99:0,114,1670	0/0:46,0:46:99:0,132,1976	1/1:8,6:13:14.36:85,14,0	1/1:6,4:10:14.05:85,14,0	0/0:13,0:13:39.12:0,39,563	0/0:24,0:24:69.23:0,69,1032	0/0:31,0:31:90.29:0,90,1327	1/1:5,5:10:14.70:94,15,0	1/1:4,14:17:27.91:158,28,0	1/1:2,6:8:11.03:59,11,0	0/0:20,0:20:57.19:0,57,852	0/0:30,0:30:81.27:0,81,1196	0/0:33,0:33:99:0,99,1437	0/0:13,0:13:39.13:0,39,584
chr10	87510982	.	TCTTAATTTCTCTTCTCAA	T	8849.10	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.473;DP=560;FS=2.823;HRun=0;HaplotypeScore=288.5880;InbreedingCoeff=0.9835;MQ=91.93;MQ0=1;MQRankSum=-13.380;QD=114.92;ReadPosRankSum=3.709;VQSLOD=4.4428;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,7942	1/1:0,7:7:18.06:835,18,0	0/0:36,0:35:99:0,102,5285	0/0:20,0:20:57.67:0,58,3556	0/0:18,0:18:54.17:0,54,4294	1/1:1,5:5:15.05:612,15,0	1/1:0,9:9:27.09:1194,27,0	0/0:36,0:36:99:0,108,7051	0/0:19,0:19:57.20:0,57,4908	1/1:0,9:9:27.09:1256,27,0	1/1:0,9:9:27.09:1061,27,0	0/0:30,0:30:90.31:0,90,7405	0/0:22,0:22:66.21:0,66,5397	0/0:29,0:29:87.30:0,87,7125	0/0:36,0:36:99:0,108,8769	0/0:44,0:44:99:0,132,10871	1/1:0,6:6:18.06:746,18,0	1/1:1,4:5:15.05:689,15,0	0/0:14,0:14:42.14:0,42,2710	0/0:24,0:24:72.25:0,72,5810	0/0:29,0:29:87.26:0,87,6612	1/1:0,5:5:15.05:603,15,0	1/1:2,13:14:36.12:1365,36,0	1/1:0,6:6:10.45:489,10,0	0/0:19,0:19:57.20:0,57,4526	0/0:25,0:25:75.24:0,75,5678	0/0:35,0:34:99:0,105,8356	0/0:13,0:13:39.13:0,39,3493
chr10	87510995	.	TCTC	T	4118.35	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.738;DP=594;FS=4.506;HRun=0;HaplotypeScore=140.5450;InbreedingCoeff=0.9951;MQ=79.10;MQ0=1;MQRankSum=-14.446;QD=36.13;ReadPosRankSum=1.940;VQSLOD=4.2134;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,2385	1/1:7,1:8:21.07:340,21,0	0/0:29,0:24:63.20:0,63,1365	0/0:22,0:20:57.66:0,58,1277	0/0:20,0:20:60.19:0,60,1419	1/1:5,7:12:29.68:480,30,0	1/1:10,0:10:27.50:403,27,0	0/0:36,0:36:99:0,105,2416	0/0:20,0:20:60.21:0,60,1453	1/1:12,3:14:39.13:611,39,0	1/1:13,0:13:20.96:305,21,0	0/0:29,0:29:87.28:0,87,2055	0/0:23,0:23:69.24:0,69,1698	0/0:27,0:27:81.28:0,81,1993	0/0:37,0:37:99:0,111,2494	0/0:44,0:44:99:0,132,3192	1/1:6,6:12:29.92:477,30,0	1/1:5,0:5:15.05:242,15,0	0/0:15,0:15:45.15:0,45,1024	0/0:24,0:24:72.23:0,72,1720	0/0:28,0:28:84.26:0,84,1925	1/1:5,4:9:20.74:304,21,0	1/1:13,3:16:34.84:565,35,0	1/1:6,8:14:24.08:391,24,0	0/0:22,0:22:63.19:0,63,1485	0/0:23,0:23:69.24:0,69,1668	0/0:34,0:33:99:0,102,2453	0/0:13,0:13:39.13:0,39,960
chr10	87510997	.	TCAA	T	4142.81	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.732;DP=594;FS=3.784;HRun=0;HaplotypeScore=141.2932;InbreedingCoeff=0.9951;MQ=77.11;MQ0=1;MQRankSum=-14.274;QD=35.41;ReadPosRankSum=1.894;VQSLOD=4.2042;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,2432	1/1:8,0:8:21.07:342,21,0	0/0:27,0:21:54.18:0,54,1225	0/0:22,0:20:57.14:0,57,1178	0/0:21,0:21:63.22:0,63,1517	1/1:12,0:12:29.68:481,30,0	1/1:10,0:10:27.50:408,27,0	0/0:34,0:34:99:0,99,2381	0/0:19,0:19:57.20:0,57,1401	1/1:17,0:16:42.12:644,42,0	1/1:9,5:14:20.96:307,21,0	0/0:30,0:30:90.31:0,90,2200	0/0:25,0:25:75.26:0,75,1829	0/0:27,0:27:81.28:0,81,1945	0/0:34,0:34:99:0,102,2436	0/0:47,0:47:99:0,141,3359	1/1:12,0:12:29.92:477,30,0	1/1:5,0:5:15.04:223,15,0	0/0:15,0:15:45.15:0,45,1107	0/0:24,0:24:72.25:0,72,1718	0/0:29,0:29:87.28:0,87,2032	1/1:9,0:9:20.74:303,21,0	1/1:16,0:16:34.14:565,34,0	1/1:14,0:14:24.08:392,24,0	0/0:20,0:20:60.21:0,60,1456	0/0:23,0:23:69.24:0,69,1643	0/0:33,0:32:99:0,99,2439	0/0:13,0:13:39.13:0,39,961
chr10	87511944	.	G	GGGC	3552.18	PASS	AB=0.882;AC=17;AF=0.315;AN=54;BaseQRankSum=15.653;DP=600;FS=0.374;HRun=0;HaplotypeScore=178.9112;InbreedingCoeff=0.9117;MQ=87.47;MQ0=0;MQRankSum=-15.659;QD=26.31;ReadPosRankSum=-0.452;VQSLOD=3.6116;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,2152	1/1:6,0:6:17.39:171,17,0	0/0:22,0:22:63.08:0,63,1006	0/0:25,0:25:63.68:0,64,1105	0/0:19,0:19:45.15:0,45,821	1/1:12,3:15:44.27:449,44,0	1/1:20,3:24:67.61:649,68,0	0/0:33,0:33:93.31:0,93,1686	0/0:25,0:25:75.18:0,75,1263	1/1:8,7:15:44.95:567,45,0	1/1:8,4:12:25.21:350,25,0	0/0:31,0:31:93.29:0,93,1660	0/0:23,0:23:69.21:0,69,1220	0/0:17,0:17:51.17:0,51,937	0/0:37,0:37:99:0,111,2068	0/0:29,0:29:87.22:0,87,1485	1/1:15,3:18:35.64:395,36,0	./.	0/0:17,0:17:51.17:0,51,911	0/0:13,0:13:36.12:0,36,668	0/0:63,0:63:99:0,185,3285	1/1:9,5:14:38.80:420,39,0	1/1:11,5:16:20.91:324,21,0	0/1:13,2:15:19.72:227,0,20	0/0:17,0:17:51.17:0,51,933	0/0:24,1:25:20.63:0,21,1221	0/0:17,0:17:51.17:0,51,950	0/0:10,0:10:30.10:0,30,558
chr10	87511945	.	T	TATAA	3999.54	PASS	AB=0.866;AC=17;AF=0.304;AN=56;BaseQRankSum=15.936;DP=611;FS=2.263;HRun=0;HaplotypeScore=191.3760;InbreedingCoeff=0.6555;MQ=87.10;MQ0=0;MQRankSum=-15.527;QD=24.24;ReadPosRankSum=0.893;VQSLOD=3.6534;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,2524	1/1:6,0:7:14.60:191,15,0	0/0:24,0:24:66.14:0,66,1254	0/0:23,0:23:65.13:0,65,1290	0/0:19,0:19:48.13:0,48,953	1/1:13,3:16:45.07:627,45,0	1/1:20,3:23:26.46:707,26,0	0/0:34,0:34:96.31:0,96,1939	0/0:24,0:24:72.25:0,72,1463	1/1:7,7:14:42.12:707,42,0	0/1:8,4:12:28.76:328,0,29	0/0:31,0:31:90.31:0,90,1886	0/0:24,0:24:69.24:0,69,1417	0/0:17,0:17:51.18:0,51,1068	0/0:37,0:37:99:0,111,2328	0/0:30,0:30:84.26:0,84,1657	1/1:18,3:21:35.38:445,35,0	0/1:2,0:2:0:0,0,0	0/0:18,0:18:51.17:0,51,1033	0/0:13,0:13:39.12:0,39,780	0/0:63,0:63:99:0,190,3834	0/1:9,5:14:10.03:395,0,10	1/1:11,5:16:13.49:303,13,0	0/1:13,2:15:73.84:293,0,74	0/0:20,0:20:51.18:0,51,1065	0/1:24,1:25:4.11:4,0,1369	0/0:17,0:17:51.18:0,51,1070	0/0:10,0:10:30.10:0,30,629
chr10	87511948	.	C	CCAGACCTGGACTGGAT	21208.58	PASS	AB=0.960;AC=21;AF=0.375;AN=56;BaseQRankSum=15.068;DP=628;FS=7.352;HRun=0;HaplotypeScore=298.9306;InbreedingCoeff=0.9102;MQ=86.84;MQ0=0;MQRankSum=-15.301;QD=122.59;ReadPosRankSum=2.273;VQSLOD=3.7851;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,5175	1/1:6,0:6:14.88:667,15,0	0/0:25,0:25:58.08:0,58,2198	0/0:23,0:23:43.68:0,44,2257	0/0:18,0:18:48.16:0,48,2077	1/1:16,3:19:22.13:2827,22,0	1/1:28,3:31:80.56:4726,81,0	0/0:36,0:36:99:0,102,3679	0/0:25,0:25:72.23:0,72,3169	1/1:15,7:22:63.22:4229,63,0	1/1:6,3:10:18.06:1151,18,0	0/0:32,0:32:93.32:0,93,4107	0/0:23,0:23:63.22:0,63,2873	0/0:18,0:18:51.18:0,51,2399	0/0:38,0:38:99:0,114,5268	0/0:29,0:29:84.26:0,84,3525	1/1:10,3:13:29.90:1492,30,0	1/1:4,0:4:9.03:322,9,0	0/0:16,0:16:48.16:0,48,1995	0/0:14,0:14:39.13:0,39,1777	0/0:64,0:64:99:0,190,8308	1/1:12,5:17:42.14:2644,42,0	1/1:8,4:13:24.08:1633,24,0	1/1:12,2:14:24.08:1362,24,0	0/0:22,0:22:57.20:0,57,2306	0/1:23,1:24:99:156,0,3225	0/0:18,0:18:54.17:0,54,2447	0/0:11,0:11:30.10:0,30,1377
chr10	87513402	.	GGT	G	918.26	PASS	AB=0.841;AC=35;AF=0.761;AN=46;BaseQRankSum=1.455;DP=508;FS=0.914;HRun=0;HaplotypeScore=73.0904;InbreedingCoeff=0.0021;MQ=73.87;MQ0=11;MQRankSum=-0.834;QD=2.48;ReadPosRankSum=2.366;VQSLOD=1.2881;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,4:19:26.22:26,0,38	./.	./.	./.	1/1:4,0:5:2.98:22,3,0	1/1:5,0:9:5.68:28,6,0	1/1:20,0:31:17.03:95,17,0	1/1:22,0:26:0.47:1,0,0	1/1:10,5:17:17.71:157,18,0	1/1:9,0:9:0.88:2,1,0	./.	0/1:16,9:27:20.95:154,0,21	1/1:7,3:9:2.94:18,3,0	0/1:23,1:24:1.42:1,0,222	1/1:3,3:8:8.69:60,9,0	1/1:9,8:20:14.87:143,15,0	0/1:12,10:23:47.88:140,0,48	0/1:19,0:22:14:14,0,149	1/1:12,0:13:2.84:14,3,0	./.	0/0:45,0:52:0:0,0,0	1/1:4,0:5:2.84:14,3,0	0/0:6,0:10:11.99:0,12,102	0/1:23,1:40:34.02:34,0,228	0/1:9,4:14:35.40:37,0,35	1/1:16,0:23:8.73:43,9,0	1/1:9,0:11:2.53:13,3,0	1/1:9,0:9:5.68:28,6,0
chr10	87515183	.	C	CCG	217.19	PASS	AB=0.670;AC=12;AF=0.222;AN=54;BaseQRankSum=5.732;DP=293;FS=0.772;HRun=0;HaplotypeScore=55.4197;InbreedingCoeff=0.0692;MQ=74.71;MQ0=0;MQRankSum=0.270;QD=2.53;ReadPosRankSum=0.528;VQSLOD=1.6333;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:68.01:0,68,955	./.	0/0:11,0:10:16.34:0,16,279	0/1:12,0:11:10.02:10,0,210	0/0:4,0:4:9:0,9,96	0/1:2,1:5:17.83:22,0,18	0/1:5,0:14:54.62:55,0,71	0/0:10,0:11:26.89:0,27,338	0/0:6,0:6:9.02:0,9,141	0/1:2,0:6:12.64:13,0,24	1/1:1,0:2:2.77:22,3,0	0/0:9,0:11:24.34:0,24,322	0/0:6,0:6:12.03:0,12,183	0/0:12,0:12:35.87:0,36,468	0/0:8,0:8:21.01:0,21,285	0/0:10,0:10:20.78:0,21,265	0/1:4,0:19:30.39:136,0,30	0/1:5,0:10:47.79:61,0,48	0/0:11,0:11:30.01:0,30,423	0/0:2,0:2:2.80:0,3,13	0/0:38,0:39:74.30:0,74,1167	1/1:4,0:4:2.04:6,2,0	0/1:1,0:2:0:0,0,0	0/1:5,0:12:11.74:28,0,12	0/0:11,0:11:26.91:0,27,321	0/0:11,0:11:27.01:0,27,358	0/0:18,0:18:43.89:0,44,622	0/0:2,0:2:6.02:0,6,97
chr10	87515291	.	G	GGTGT	155.88	PASS	AB=0.876;AC=8;AF=0.211;AN=38;BaseQRankSum=-1.496;DP=442;FS=2.007;HRun=0;HaplotypeScore=86.8584;InbreedingCoeff=0.3316;MQ=63.23;MQ0=17;MQRankSum=1.496;QD=1.34;ReadPosRankSum=0.976;VQSLOD=1.5545;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:19,3:26:3.17:64,0,3	0/1:6,0:6:0:0,0,0	./.	./.	./.	0/0:7,0:7:2.49:0,2,9	0/0:18,0:18:6.02:0,6,91	0/0:16,0:15:2.60:0,3,10	0/0:13,0:13:3.01:0,3,46	0/0:7,0:10:3:0,3,28	0/0:4,0:4:0.05:0,0,0	0/0:16,0:16:5.61:0,6,88	0/0:16,0:16:6.01:0,6,67	0/1:15,0:14:0:0,0,0	./.	0/1:13,4:17:0:0,0,0	./.	0/0:15,0:15:12.03:0,12,158	./.	./.	0/0:63,0:61:3.95:0,4,30	0/0:7,0:7:1.72:0,2,4	./.	1/1:21,0:23:9.03:176,9,0	./.	1/1:17,0:16:2.69:8,3,0	0/0:12,0:13:5.67:0,6,51	0/0:4,0:5:3:0,3,28
chr10	87516626	.	T	TC	6411.28	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-13.813;DP=639;FS=1.058;HRun=7;HaplotypeScore=61.2797;InbreedingCoeff=0.9928;MQ=76.20;MQ0=0;MQRankSum=-1.694;QD=30.68;ReadPosRankSum=1.752;VQSLOD=5.1208;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:96.14:0,96,926	1/1:0,8:9:20.90:254,21,0	0/0:15,0:15:24.01:0,24,224	0/0:19,0:18:17.64:0,18,268	0/0:24,0:24:66.10:0,66,637	1/1:1,15:16:39.12:471,39,0	1/1:2,28:30:81.25:978,81,0	0/0:26,0:26:63.08:0,63,604	0/0:25,0:25:57.07:0,57,545	1/1:4,13:17:39.12:470,39,0	1/1:0,15:15:39.12:471,39,0	0/0:43,0:43:99:0,117,1113	0/0:19,0:19:48.07:0,48,463	0/0:26,0:26:72.11:0,72,695	0/0:21,0:21:54.07:0,54,516	0/0:14,0:14:42.06:0,42,400	1/1:1,31:32:90.28:1087,90,0	1/1:4,23:27:66.20:796,66,0	0/0:29,0:29:78.09:0,78,748	0/0:15,0:15:36:0,36,337	0/0:38,0:38:99:0,105,1008	1/1:0,15:15:45.14:543,45,0	1/1:2,11:13:24.07:290,24,0	1/1:6,29:35:87.27:1051,87,0	0/0:18,0:18:48.08:0,48,463	0/0:31,0:31:81.08:0,81,768	0/0:22,0:22:63.10:0,63,608	0/0:6,0:6:12.02:0,12,116
chr10	87517756	.	TG	T	2031.35	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.514;DP=628;FS=24.503;HRun=5;HaplotypeScore=62.2338;InbreedingCoeff=0.9936;MQ=92.51;MQ0=0;MQRankSum=-1.236;QD=29.44;ReadPosRankSum=0.516;VQSLOD=1.7477;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,1935	1/1:0,7:7:21.06:238,21,0	0/0:19,0:19:57.16:0,57,744	0/0:36,0:36:99:0,99,1296	0/0:12,0:12:36.11:0,36,475	0/0:22,0:22:63.21:0,63,861	0/0:28,0:28:78.25:0,78,1051	0/0:22,0:22:60.18:0,60,790	0/0:19,0:19:57.18:0,57,764	1/1:0,21:21:60.14:661,60,0	1/1:1,8:9:27.08:305,27,0	0/0:43,0:43:99:0,117,1601	0/0:19,0:19:57.18:0,57,763	0/0:20,0:20:57.17:0,57,762	0/0:23,0:23:69.23:0,69,941	0/0:17,0:17:45.15:0,45,612	1/1:1,31:32:87.25:987,87,0	0/0:24,0:24:63.21:0,63,862	0/0:12,0:12:30.10:0,30,407	0/0:12,0:12:27.06:0,27,350	0/0:65,0:65:99:0,178,2385	0/0:18,0:18:51.17:0,51,697	0/0:19,0:19:57.14:0,57,724	0/0:24,0:24:72.23:0,72,970	0/0:14,0:14:36.11:0,36,478	0/0:21,0:21:54.17:0,54,724	0/0:14,0:14:39.13:0,39,533	0/0:7,0:7:15.04:0,15,189
chr10	87520211	.	GCGCTCTCTCTCTCT	G	802	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=1.450;DP=513;FS=3.712;HRun=0;HaplotypeScore=192.8202;InbreedingCoeff=0.9419;MQ=72.22;MQ0=8;MQRankSum=-3.517;QD=17.82;ReadPosRankSum=-1.471;VQSLOD=2.1438;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:74.63:0,75,1575	1/1:0,9:9:15.05:226,15,0	0/0:29,0:16:38.62:0,39,363	0/0:31,0:15:31.71:0,32,229	0/0:4,0:4:11.96:0,12,186	0/0:22,0:21:52.25:0,52,1736	0/0:29,0:29:72.03:0,72,1904	0/0:19,0:19:47.41:0,47,536	0/0:18,0:18:47.89:0,48,994	1/1:12,0:13:33.31:356,33,0	1/1:3,8:9:6.02:74,6,0	0/0:21,0:21:50.38:0,50,1036	0/0:13,0:12:27.54:0,28,744	0/0:11,0:11:23.74:0,24,1032	0/0:26,0:26:74.77:0,75,1264	0/0:12,0:12:27.47:0,27,871	1/1:9,3:12:28.23:298,28,0	0/0:17,0:17:38.89:0,39,1128	0/0:14,0:14:40.70:0,41,788	0/0:9,0:9:17.93:0,18,353	0/0:43,0:43:99:0,114,2554	0/0:15,0:14:26.65:0,27,394	0/0:7,0:7:17.97:0,18,238	0/0:34,0:37:69.50:0,69,2407	0/0:7,0:7:11.96:0,12,114	0/0:22,0:22:65.88:0,66,2170	0/0:15,0:14:41.93:0,42,792	0/0:11,0:11:30.73:0,31,504
chr10	87520213	.	G	GCTCT	1468.51	PASS	AB=0.944;AC=29;AF=0.537;AN=54;BaseQRankSum=-0.648;DP=573;FS=6.618;HRun=0;HaplotypeScore=135.7221;InbreedingCoeff=0.2076;MQ=68.72;MQ0=12;MQRankSum=3.423;QD=3.37;ReadPosRankSum=2.340;VQSLOD=2.1521;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,13:45:20.29:203,0,20	1/1:9,0:9:0.47:1,0,0	0/1:28,0:15:0:0,0,0	0/1:30,0:14:0.34:0,0,0	1/1:6,0:6:2.99:24,3,0	1/1:26,0:28:12.91:94,13,0	0/1:29,0:29:2.91:3,0,216	0/1:21,0:21:11.51:15,0,12	0/0:20,0:20:8.91:0,9,109	0/0:13,0:13:2.96:0,3,19	0/1:10,0:8:0:0,0,0	0/0:19,0:20:8.97:0,9,131	0/1:13,0:13:13.81:14,0,66	0/0:15,0:15:4.38:0,4,130	0/0:29,0:29:6.96:0,7,94	0/0:11,0:13:12.50:0,12,149	./.	1/1:21,0:18:21.45:289,21,0	1/1:16,0:16:2.50:21,3,0	1/1:12,0:12:0.61:5,1,0	0/1:41,0:42:52.20:108,0,52	1/1:17,0:16:1.39:33,1,0	0/0:9,0:9:0.47:0,0,1	1/1:40,3:43:35.87:622,36,0	0/0:6,0:6:0.47:0,0,1	0/1:25,0:33:93.13:93,0,160	1/1:14,1:17:5.75:82,6,0	1/1:11,0:11:1.25:3,1,0
chr10	87520271	.	GCGCT	G	1669.37	PASS	AB=0.971;AC=11;AF=0.196;AN=56;BaseQRankSum=8.696;DP=497;FS=17.778;HRun=0;HaplotypeScore=109.2170;InbreedingCoeff=0.0934;MQ=71.11;MQ0=7;MQRankSum=2.275;QD=8.39;ReadPosRankSum=4.408;VQSLOD=1.0552;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:97.80:0,98,2017	0/1:9,1:10:6.82:96,0,7	0/0:14,0:9:17.32:0,17,119	0/0:22,0:10:4.15:0,4,21	0/0:12,0:12:30.10:0,30,657	0/1:24,0:24:1.27:279,0,1	0/1:30,1:31:36.44:162,0,36	0/0:13,0:13:23.86:0,24,382	0/0:17,0:17:22.50:0,23,773	0/1:23,0:23:87.88:228,0,88	1/1:10,0:10:15.76:130,16,0	0/0:19,0:19:50.49:0,50,934	0/0:12,0:12:33.10:0,33,708	0/0:14,0:14:41.15:0,41,614	0/0:20,0:20:60.12:0,60,1251	0/0:14,0:14:38.95:0,39,686	0/1:18,0:17:14.11:181,0,14	0/1:21,0:19:22.50:153,0,23	0/0:10,0:9:24.03:0,24,364	0/0:8,0:8:15.04:0,15,292	0/0:34,0:34:93.17:0,93,1749	0/1:10,2:11:5.75:131,0,6	0/1:11,0:10:40.35:40,0,56	0/1:39,0:38:21.12:421,0,21	0/0:10,0:10:30.10:0,30,698	0/0:24,0:24:69.14:0,69,1274	0/0:10,0:10:10.49:0,10,416	0/0:2,0:2:6.02:0,6,120
chr10	87520275	.	TCGCG	T	3665.10	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=5.189;DP=507;FS=24.441;HRun=0;HaplotypeScore=103.5335;InbreedingCoeff=0.8538;MQ=71.12;MQ0=8;MQRankSum=-0.351;QD=17.62;ReadPosRankSum=3.940;VQSLOD=1.6307;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:91.31:0,91,1850	1/1:9,3:12:11.99:170,12,0	0/0:13,0:9:8.21:0,8,46	0/0:20,0:10:1.53:0,2,4	0/0:12,0:12:33.11:0,33,595	1/1:6,15:22:21.37:471,21,0	1/1:6,23:29:19:314,19,0	0/0:15,0:15:23.89:0,24,320	0/0:17,0:17:28.73:0,29,701	1/1:8,14:23:18.16:546,18,0	1/1:6,2:10:17.94:270,18,0	0/0:20,0:20:45.68:0,46,789	0/0:12,0:12:33.09:0,33,586	0/0:15,0:14:25.82:0,26,492	0/0:20,0:21:54.84:0,55,1047	0/0:16,0:16:30.05:0,30,589	1/1:5,13:18:24.08:391,24,0	1/1:8,11:17:12.26:304,12,0	0/0:10,0:10:18.03:0,18,217	0/0:7,0:7:15.04:0,15,270	0/0:34,0:34:84.04:0,84,1524	1/1:10,2:12:15.52:237,16,0	1/1:5,7:11:6.02:104,6,0	1/1:11,29:39:51.62:842,52,0	0/0:13,0:13:39.05:0,39,749	0/0:25,0:25:58.58:0,59,1027	0/1:10,0:10:14.33:14,0,317	0/0:4,0:4:11.99:0,12,155
chr10	87520289	.	GCA	G	179.84	PASS	AB=0.938;AC=15;AF=0.268;AN=56;BaseQRankSum=2.346;DP=503;FS=2.327;HRun=0;HaplotypeScore=94.7253;InbreedingCoeff=-0.2719;MQ=67.93;MQ0=6;MQRankSum=-1.499;QD=0.65;ReadPosRankSum=0.166;VQSLOD=1.9360;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:45,2:47:6.77:7,0,914	0/1:13,0:13:24.45:24,0,54	0/0:9,0:7:0.47:0,0,1	0/1:12,0:6:0:0,0,0	0/0:14,0:14:26.84:0,27,311	0/0:22,0:22:6.89:0,7,64	0/0:27,0:27:14.27:0,14,64	0/0:14,0:14:9.86:0,10,104	0/1:15,0:17:64.37:64,0,316	0/0:23,0:23:12.55:0,13,198	0/1:11,0:11:7.89:8,0,31	0/1:20,3:23:26.51:27,0,423	0/1:13,1:15:1.92:2,0,288	0/0:18,0:17:38.96:0,39,420	0/1:20,4:25:29.14:29,0,525	0/0:12,3:15:1.32:0,1,392	0/1:18,0:17:0.24:0,0,60	0/0:15,0:14:14.59:0,15,54	0/1:11,1:10:5.84:6,0,53	0/1:4,2:6:51.58:52,0,134	0/1:30,6:36:6.65:7,0,693	0/0:11,0:11:11.12:0,11,51	0/0:8,0:8:4.93:0,5,20	0/0:37,0:36:8.40:0,8,89	0/0:15,0:15:34.66:0,35,492	0/1:24,0:24:26.43:26,0,475	0/1:8,0:7:9.84:10,0,128	0/1:8,0:8:52.87:53,0,153
chr10	87520499	.	G	GT	9436.15	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-12.703;DP=667;FS=21.102;HRun=1;HaplotypeScore=66.7476;InbreedingCoeff=0.9993;MQ=88.45;MQ0=2;MQRankSum=-3.486;QD=42.89;ReadPosRankSum=1.103;VQSLOD=2.8186;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,153,2120	1/1:1,9:10:27.09:431,27,0	0/0:19,0:20:55.72:0,56,693	0/0:29,0:29:63.61:0,64,1062	0/0:11,0:11:24.08:0,24,336	1/1:0,20:20:54.18:863,54,0	1/1:1,27:28:72.25:1151,72,0	0/0:24,0:24:72.24:0,72,1004	0/0:21,0:21:60.18:0,60,821	1/1:0,30:31:90.31:1430,90,0	1/1:1,9:10:27.09:432,27,0	0/0:36,0:36:99:0,102,1409	0/0:24,0:24:72.24:0,72,1007	0/0:25,0:25:72.23:0,72,982	0/0:24,0:24:72.19:0,72,967	0/0:24,0:24:72.22:0,72,989	1/1:0,27:27:72.25:1149,72,0	1/1:0,33:33:96.33:1535,96,0	0/0:17,0:17:51.17:0,51,710	0/0:15,0:15:42.14:0,42,576	0/0:52,0:50:99:0,141,1953	1/1:0,15:15:33.11:527,33,0	1/1:0,17:17:45.15:719,45,0	1/1:2,27:29:75.26:1199,75,0	0/0:19,0:19:57.19:0,57,797	0/0:26,1:27:33.28:0,33,1039	0/0:16,0:16:48.16:0,48,671	0/0:12,0:12:36.12:0,36,495
chr10	87524870	.	GT	G	762.72	PASS	AB=0.868;AC=10;AF=0.179;AN=56;BaseQRankSum=5.703;DP=357;FS=4.720;HRun=11;HaplotypeScore=39.9652;InbreedingCoeff=0.7528;MQ=72.58;MQ0=7;MQRankSum=0.346;QD=11.92;ReadPosRankSum=-0.469;VQSLOD=2.4689;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:56.71:0,57,592	1/1:1,2:3:8.99:74,9,0	0/0:22,0:9:11.50:0,11,103	0/0:16,0:10:16.50:0,16,143	0/0:14,0:14:36.55:0,37,377	0/0:14,1:16:20.30:0,20,405	0/0:9,0:9:12.03:0,12,128	0/0:29,1:30:41.36:0,41,623	0/0:8,0:9:26.90:0,27,270	1/1:0,15:15:44.93:366,45,0	1/1:2,6:8:14.98:123,15,0	0/0:9,0:9:18.04:0,18,185	0/0:4,0:4:12.03:0,12,128	0/0:8,0:8:18.05:0,18,192	0/1:7,1:8:0.56:1,0,200	0/0:8,0:8:21.03:0,21,210	1/1:2,17:19:43.97:351,44,0	0/0:12,0:12:36.08:0,36,376	0/0:19,1:18:20.41:0,20,393	0/0:15,0:15:35.01:0,35,437	0/0:9,0:11:29.90:0,30,296	0/0:5,0:7:20.72:0,21,186	0/0:11,0:10:24.06:0,24,256	0/0:7,0:7:21.03:0,21,215	0/0:11,0:11:0.53:0,1,200	0/0:19,1:21:35.35:0,35,551	0/1:9,2:9:0.60:1,0,191	0/0:8,0:8:18.03:0,18,183
chr10	87526351	.	C	CCACT	2258.28	PASS	AC=4;AF=0.080;AN=50;BaseQRankSum=-6.726;DP=393;FS=0.734;HRun=0;HaplotypeScore=76.8645;InbreedingCoeff=0.7088;MQ=89.59;MQ0=0;MQRankSum=-1.847;QD=55.08;ReadPosRankSum=4.821;VQSLOD=4.8934;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.25:0,72,1321	./.	0/0:18,0:18:37.29:0,37,606	0/0:17,0:16:33.11:0,33,585	0/0:7,0:7:9.03:0,9,164	0/0:9,0:9:18.06:0,18,331	0/0:19,0:19:51.65:0,52,938	0/0:21,0:21:51.16:0,51,878	0/0:12,0:12:24.03:0,24,377	./.	1/1:0,1:1:3.01:70,3,0	0/0:13,0:13:36.08:0,36,624	0/0:13,0:13:36.12:0,36,662	0/0:7,0:7:18.06:0,18,323	0/0:15,0:15:33.03:0,33,536	0/0:8,0:8:17.98:0,18,255	1/1:1,39:40:87.30:2295,87,0	0/0:26,0:26:69.21:0,69,1236	0/0:20,0:20:41.95:0,42,662	0/0:2,0:2:0:0,0,0	0/0:51,0:51:99:0,141,2560	0/0:2,0:2:6.02:0,6,110	0/0:1,0:1:3.01:0,3,55	0/0:31,0:31:81.75:0,82,1480	./.	0/0:10,0:10:21.07:0,21,386	0/0:6,0:6:15.05:0,15,275	0/0:12,0:12:36.10:0,36,600
chr10	87526492	.	T	TG	283.99	PASS	AB=0.714;AC=10;AF=0.192;AN=52;BaseQRankSum=-1.883;DP=168;FS=4.884;HRun=9;HaplotypeScore=30.5130;InbreedingCoeff=0.2552;MQ=101.58;MQ0=0;MQRankSum=1.216;QD=7.89;ReadPosRankSum=-2.089;VQSLOD=-0.1832;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:35.99:0,36,312	0/0:1,0:1:3:0,3,26	0/1:11,0:11:14.03:14,0,72	0/0:8,0:9:4.02:0,4,44	0/0:4,0:4:8.99:0,9,78	0/1:1,1:2:20.04:27,0,20	0/1:3,7:10:8:148,0,8	0/0:6,0:6:8.99:0,9,78	0/0:4,0:4:11.98:0,12,101	0/0:2,0:2:6:0,6,52	0/0:3,0:3:6:0,6,52	0/0:11,1:12:20.96:0,21,179	0/0:10,0:10:26.99:0,27,234	0/0:7,0:7:8.98:0,9,78	0/0:4,0:4:9:0,9,78	0/0:7,0:7:17.98:0,18,153	0/0:3,0:3:9:0,9,78	1/1:0,3:3:6.02:66,6,0	./.	0/0:2,0:2:3:0,3,26	0/0:20,0:20:50.97:0,51,443	1/1:1,2:3:6.01:63,6,0	1/1:0,1:1:3.01:33,3,0	0/1:2,3:6:14.19:69,0,14	0/0:6,0:6:18:0,18,156	0/0:5,0:5:6:0,6,52	0/0:12,0:12:32.99:0,33,286	./.
chr10	87528815	.	T	TG	981.28	PASS	AB=0.981;AC=12;AF=0.214;AN=56;BaseQRankSum=-0.362;DP=606;FS=1.202;HRun=9;HaplotypeScore=83.7867;InbreedingCoeff=0.3562;MQ=79.92;MQ0=0;MQRankSum=0.542;QD=7.38;ReadPosRankSum=-4.617;VQSLOD=0.9691;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:98.45:0,98,823	1/1:1,7:8:15.04:164,15,0	0/0:23,0:22:12.98:0,13,291	0/0:24,0:23:38.93:0,39,328	0/0:26,0:28:67.97:0,68,568	0/1:9,0:9:35.22:35,0,48	0/0:23,0:23:17.27:0,17,178	0/0:34,0:34:77.95:0,78,673	0/0:21,0:21:53.93:0,54,461	0/1:11,0:11:11.02:102,0,11	1/1:4,5:9:12.03:133,12,0	0/0:29,0:29:68.96:0,69,599	0/0:13,0:13:32.97:0,33,283	0/0:23,0:23:56.88:0,57,480	0/0:34,0:34:86.96:0,87,755	0/0:27,0:27:77.98:0,78,674	1/1:2,23:25:54.15:597,54,0	0/1:18,0:18:23.14:23,0,85	0/0:13,0:13:32.98:0,33,286	0/0:21,0:21:23.71:0,24,386	0/0:53,0:53:99:0,131,1108	0/1:11,0:11:13.41:13,0,44	0/0:7,0:7:11.54:0,12,72	0/1:34,0:34:64.66:65,0,154	0/0:23,0:23:42.21:0,42,480	0/0:20,0:20:17.73:0,18,366	0/0:22,0:22:50.96:0,51,438	0/1:7,1:8:15.18:15,0,112
chr10	87530449	.	GA	G	2554.10	PASS	AB=0.857;AC=23;AF=0.411;AN=56;BaseQRankSum=14.766;DP=574;FS=23.248;HRun=11;HaplotypeScore=105.3306;InbreedingCoeff=0.8822;MQ=54.73;MQ0=17;MQRankSum=-14.181;QD=12.52;ReadPosRankSum=0.674;VQSLOD=1.6815;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,4:21:15.48:242,15,0	1/1:5,0:5:5.98:48,6,0	0/0:22,0:7:17.62:0,18,152	0/0:17,0:5:14.88:0,15,122	0/0:26,3:29:1.09:0,1,611	1/1:11,2:12:26.93:214,27,0	1/1:13,4:17:32.75:262,33,0	0/0:21,1:22:45.07:0,45,462	0/0:17,1:18:26.44:0,26,469	1/1:23,6:29:44.88:532,45,0	1/1:16,4:19:38.59:283,39,0	0/0:23,0:23:57.14:0,57,606	0/0:27,1:28:50.58:0,51,742	0/0:21,0:21:54.07:0,54,550	0/0:21,0:21:51.13:0,51,542	0/0:28,0:28:72.15:0,72,756	1/1:17,4:21:23.77:231,24,0	1/1:5,2:7:11.97:96,12,0	0/0:23,2:25:19.88:0,20,616	0/0:23,0:23:29.91:0,30,513	0/1:13,3:18:4.46:4,0,336	1/1:17,2:19:41.81:324,42,0	1/1:21,6:27:32.61:438,33,0	1/1:4,3:6:11.96:96,12,0	0/0:18,1:19:32.06:0,32,505	0/0:22,1:23:34.32:0,34,555	0/0:29,0:29:72.15:0,72,751	0/0:18,0:20:50.61:0,51,507
chr10	87530459	.	A	AGAATCAT	10805.25	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.210;DP=604;FS=17.628;HRun=0;HaplotypeScore=157.7903;InbreedingCoeff=0.9866;MQ=68.73;MQ0=8;MQRankSum=-16.413;QD=58.41;ReadPosRankSum=0.394;VQSLOD=3.4565;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,9:18:22.35:797,22,0	1/1:4,2:6:12.02:277,12,0	0/0:21,0:16:41.51:0,42,641	0/0:19,0:11:22.55:0,23,367	0/0:36,0:36:96.30:0,96,2183	1/1:6,7:12:30.05:750,30,0	1/1:11,7:17:38.66:937,39,0	0/0:21,0:20:57.15:0,57,1291	0/0:24,0:24:63.14:0,63,1471	1/1:16,17:34:84.05:2288,84,0	1/1:12,7:18:38.87:1047,39,0	0/0:22,0:22:63.04:0,63,1615	0/0:26,0:26:75.19:0,75,1716	0/0:23,0:23:66.14:0,66,1529	0/0:24,0:24:60.19:0,60,1474	0/0:29,0:29:78.24:0,78,1908	1/1:8,9:18:38.98:1078,39,0	1/1:5,1:6:10.83:230,11,0	0/0:29,0:29:59.63:0,60,1879	0/0:27,0:27:45:0,45,1618	0/0:22,0:22:54.14:0,54,1257	1/1:5,12:17:45.12:1318,45,0	1/1:11,16:27:38.78:1777,39,0	1/1:7,2:6:15:307,15,0	0/0:25,0:25:41.42:0,41,1498	0/0:23,0:23:43.39:0,43,1567	0/0:27,0:27:78.25:0,78,1945	0/0:21,0:21:54.01:0,54,1221
chr10	87530461	.	GA	G	1811.19	PASS	AB=0.672;AC=17;AF=0.304;AN=56;BaseQRankSum=15.796;DP=607;FS=2.897;HRun=11;HaplotypeScore=115.9001;InbreedingCoeff=0.5555;MQ=70.50;MQ0=5;MQRankSum=-14.574;QD=9.84;ReadPosRankSum=5.436;VQSLOD=2.6833;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:5,14:19:0.40:167,0,0	1/1:4,2:6:7.78:49,8,0	0/0:22,0:18:25.54:0,26,546	0/0:18,0:11:29.97:0,30,405	0/0:34,0:34:99:0,102,1432	1/1:5,7:12:20.06:132,20,0	0/1:10,8:17:8.51:127,0,9	0/0:23,0:23:63.17:0,63,900	0/0:25,0:25:72.17:0,72,1005	0/1:15,17:34:24.25:418,0,24	1/1:4,12:16:0.14:230,0,0	0/0:23,0:23:69.21:0,69,990	0/0:28,0:28:84.19:0,84,1119	0/0:22,0:22:63.19:0,63,899	0/0:24,0:24:63.20:0,63,920	0/0:29,0:29:87.25:0,87,1222	1/1:4,14:18:13.61:212,14,0	0/1:4,2:6:6.42:40,0,6	0/0:31,0:31:93.22:0,93,1310	0/0:26,0:26:72.24:0,72,1066	0/0:25,0:25:71.31:0,71,914	1/1:5,12:17:38.02:258,38,0	1/1:11,16:27:0.42:300,0,0	0/1:4,5:8:7.46:55,0,7	0/0:25,0:25:72.22:0,72,1035	0/0:23,0:23:66.09:0,66,958	0/0:25,0:25:75.25:0,75,1114	0/0:20,0:20:57.11:0,57,776
chr10	87530462	.	A	AATCATAG	13701.42	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=10.034;DP=638;FS=4.037;HRun=0;HaplotypeScore=162.4941;InbreedingCoeff=0.9748;MQ=71.07;MQ0=4;MQRankSum=-15.362;QD=64.33;ReadPosRankSum=2.553;VQSLOD=5.0755;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:24.08:859,24,0	1/1:6,4:10:12.04:449,12,0	0/0:22,0:19:36.91:0,37,839	0/0:17,0:12:21.07:0,21,441	0/0:35,0:35:87.30:0,87,2068	1/1:11,3:15:24.08:887,24,0	1/1:14,6:19:30.09:1056,30,0	0/0:24,0:24:51.12:0,51,1078	0/0:26,0:26:66.21:0,66,1484	1/1:27,7:41:93.29:3158,93,0	1/1:18,0:18:39.13:1383,39,0	0/0:24,0:24:63.21:0,63,1475	0/0:28,0:28:63.19:0,63,1448	0/0:22,0:22:60.19:0,60,1409	0/0:24,0:24:60.20:0,60,1394	0/0:29,0:29:78.24:0,78,1782	1/1:19,0:19:39.13:1404,39,0	1/1:6,0:6:6.02:230,6,0	0/0:31,0:31:81.24:0,81,1773	0/0:24,0:24:66.23:0,66,1539	0/0:25,0:25:69.18:0,69,1402	1/1:16,4:20:45.15:1688,45,0	1/1:26,4:32:57.20:2146,57,0	1/1:11,1:9:12.04:440,12,0	0/0:26,0:26:66.19:0,66,1441	0/0:23,0:23:57.20:0,57,1402	0/0:25,0:25:69.24:0,69,1691	0/0:20,0:20:45.15:0,45,1051
chr10	87530570	.	A	AT	730.50	PASS	AB=0.830;AC=10;AF=0.179;AN=56;BaseQRankSum=7.271;DP=669;FS=0.607;HRun=0;HaplotypeScore=150.7469;InbreedingCoeff=-0.2165;MQ=73.78;MQ0=0;MQRankSum=-9.321;QD=3.87;ReadPosRankSum=-5.611;VQSLOD=2.2545;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,3:19:71.83:72,0,243	0/0:12,0:12:33.08:0,33,364	0/0:14,0:14:42.13:0,42,554	0/0:24,0:24:56.32:0,56,775	0/0:21,0:21:63.20:0,63,862	0/1:16,3:19:62.26:62,0,277	0/1:13,3:16:99:116,0,135	0/0:29,0:29:81.24:0,81,1088	0/0:36,0:36:99:0,108,1489	0/1:17,7:24:99:196,0,461	0/1:18,2:20:72.21:72,0,313	0/0:28,0:28:72.23:0,72,988	0/0:35,0:35:99:0,105,1432	0/0:26,0:26:69.23:0,69,964	0/0:38,0:38:99:0,111,1518	0/0:35,0:35:99:0,102,1423	0/1:7,5:12:38.48:177,0,38	0/1:7,2:9:18.58:19,0,169	0/0:31,0:31:90.28:0,90,1239	0/0:34,0:34:99:0,99,1328	0/0:51,0:51:99:0,147,1965	0/1:29,6:35:64.61:65,0,619	0/1:21,3:24:80.23:80,0,344	0/1:8,3:11:16.82:17,0,118	0/0:12,0:12:36.12:0,36,503	0/0:23,0:23:69.20:0,69,918	0/0:21,0:21:57.18:0,57,780	0/0:10,0:10:30.10:0,30,419
chr10	87530575	.	A	AG	4442.89	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.747;DP=622;FS=12.336;HRun=0;HaplotypeScore=133.0835;InbreedingCoeff=0.9346;MQ=72.75;MQ0=0;MQRankSum=-14.601;QD=28.66;ReadPosRankSum=4.984;VQSLOD=3.8446;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,10:17:11.41:405,11,0	1/1:0,8:8:24.08:377,24,0	0/0:13,0:13:39.04:0,39,511	0/0:23,0:23:66.10:0,66,861	0/0:18,0:18:54.18:0,54,755	1/1:2,9:14:21.84:417,22,0	1/1:1,8:12:15.36:322,15,0	0/0:32,0:32:84.28:0,84,1174	0/0:35,0:35:99:0,105,1465	1/1:0,16:23:50.72:789,51,0	1/1:0,15:17:36.18:602,36,0	0/0:31,0:31:90.30:0,90,1257	0/0:35,0:35:99:0,102,1407	0/0:27,0:27:72.24:0,72,1007	0/0:40,0:40:99:0,111,1535	0/0:35,0:35:99:0,102,1393	1/1:1,3:9:2.43:93,2,0	1/1:2,2:6:6.91:97,7,0	0/0:30,0:30:90.28:0,90,1240	0/0:30,0:30:87.29:0,87,1217	0/0:52,0:52:99:0,147,2038	1/1:0,20:26:16.45:835,16,0	1/1:1,10:14:17.46:367,17,0	1/1:2,4:9:6.60:138,7,0	0/0:13,0:13:39.13:0,39,546	0/0:20,0:20:60.20:0,60,839	0/0:23,0:23:63.20:0,63,864	0/0:10,0:10:26.96:0,27,278
chr10	87530578	.	A	AATGTGAAG	17324.86	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=17.716;DP=645;FS=14.383;HRun=0;HaplotypeScore=182.5266;InbreedingCoeff=0.9942;MQ=71.84;MQ0=0;MQRankSum=-18.290;QD=99.00;ReadPosRankSum=1.460;VQSLOD=4.7636;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,10:22:42.14:1598,42,0	1/1:1,8:9:27.09:1214,27,0	0/0:13,0:13:39.12:0,39,1048	0/0:24,0:24:66.22:0,66,1852	0/0:18,0:18:54.19:0,54,1635	1/1:7,9:16:45.15:1595,45,0	1/1:7,7:14:42.13:1258,42,0	0/0:34,0:34:96.29:0,96,2631	0/0:37,0:37:99:0,111,3182	1/1:10,16:26:78.27:2902,78,0	1/1:6,15:21:54.18:2088,54,0	0/0:33,0:33:93.29:0,93,2654	0/0:34,0:34:99:0,102,2914	0/0:27,0:27:69.24:0,69,2071	0/0:41,0:41:99:0,114,3278	0/0:35,0:35:99:0,102,3023	1/1:10,3:13:37.01:1097,37,0	1/1:3,2:5:15.05:509,15,0	0/0:28,0:28:84.22:0,84,2339	0/0:32,0:32:96.32:0,96,2741	0/0:52,0:52:99:0,157,4566	1/1:7,18:25:75.25:2931,75,0	1/1:3,10:13:36.06:1326,36,0	1/1:7,4:11:18.53:806,19,0	0/0:13,0:13:39.13:0,39,1180	0/0:19,0:19:57.20:0,57,1726	0/0:25,0:25:69.24:0,69,2014	0/0:5,0:5:15.05:0,15,404
chr10	87531296	.	GTA	G	1088.18	PASS	AB=0.819;AC=16;AF=0.381;AN=42;BaseQRankSum=1.233;DP=271;FS=7.703;HRun=0;HaplotypeScore=39.9156;InbreedingCoeff=0.3038;MQ=65.37;MQ0=2;MQRankSum=2.219;QD=8.24;ReadPosRankSum=-1.069;VQSLOD=1.2802;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:2.98:0,3,21	0/0:0,0:5:8.90:0,9,68	./.	./.	0/1:12,1:13:17.11:17,0,170	0/0:3,0:3:0:0,0,0	./.	1/1:17,16:35:35.81:546,36,0	0/0:4,0:4:6.02:0,6,94	0/0:0,0:7:3:0,3,26	0/0:11,0:11:3:0,3,25	0/1:16,1:17:14.08:14,0,262	./.	0/0:3,0:3:3.01:0,3,43	0/0:11,0:11:12.02:0,12,164	1/1:4,1:5:3.01:35,3,0	0/0:1,0:18:9:0,9,78	0/0:6,0:6:5.99:0,6,48	0/1:8,7:16:26.31:165,0,26	1/1:2,1:4:5.85:49,6,0	1/1:8,0:11:5.83:38,6,0	./.	./.	./.	0/0:8,0:8:12.01:0,12,163	1/1:3,4:7:11.85:93,12,0	0/1:9,5:14:35.55:93,0,36	1/1:4,5:10:17.88:181,18,0
chr10	87531740	.	A	ACT	2057.21	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=0.422;DP=344;FS=1.923;HRun=0;HaplotypeScore=50.8867;InbreedingCoeff=0.8710;MQ=74.56;MQ0=0;MQRankSum=-1.054;QD=16.33;ReadPosRankSum=1.427;VQSLOD=3.3986;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:26.28:148,26,0	1/1:6,0:6:11.95:123,12,0	0/0:18,0:14:14.53:0,15,137	0/0:18,0:12:1.02:0,1,123	0/0:11,0:11:24.05:0,24,272	1/1:3,20:23:19.39:622,19,0	1/1:2,2:4:6.02:96,6,0	0/0:40,0:40:83.96:0,84,983	0/0:8,0:8:16.29:0,16,184	1/1:13,0:13:26.94:258,27,0	1/1:8,0:8:11.80:87,12,0	0/0:11,0:11:27.06:0,27,311	0/0:6,0:6:12.03:0,12,140	0/0:6,0:6:12.01:0,12,116	0/0:11,0:11:27.04:0,27,289	0/0:9,0:9:24.06:0,24,286	1/1:21,0:20:21.06:249,21,0	1/1:5,12:17:24.08:387,24,0	0/0:17,0:16:38.86:0,39,413	0/0:12,0:12:33.07:0,33,369	0/0:6,0:6:6.01:0,6,56	1/1:2,6:8:14.76:134,15,0	1/1:2,4:5:5.93:66,6,0	1/1:2,3:5:6.02:97,6,0	0/0:11,0:11:33.11:0,33,424	0/0:3,0:3:9.01:0,9,90	0/0:18,0:18:31.95:0,32,530	0/0:13,0:13:36.07:0,36,410
chr10	87531749	.	C	CTCT	1882.63	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=3.801;DP=348;FS=1.847;HRun=0;HaplotypeScore=62.9659;InbreedingCoeff=0.7319;MQ=74.13;MQ0=0;MQRankSum=0.455;QD=15.69;ReadPosRankSum=2.816;VQSLOD=3.1102;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:24.01:96,24,0	1/1:0,5:6:11.96:211,12,0	0/0:17,0:10:20.08:0,20,187	0/0:24,0:13:12.68:0,13,165	0/0:10,0:10:27.01:0,27,361	1/1:25,0:25:0.23:312,0,0	1/1:2,0:2:6:52,6,0	0/0:39,0:42:99:0,101,1391	0/0:8,0:8:16.28:0,16,237	1/1:1,9:13:32.95:373,33,0	1/1:0,7:7:14.76:136,15,0	0/0:10,0:10:27.04:0,27,391	0/0:6,0:6:17.95:0,18,220	0/0:4,0:4:12.01:0,12,130	0/0:10,0:10:30.03:0,30,364	0/0:10,0:10:24.04:0,24,366	1/1:4,14:21:24.08:517,24,0	0/1:15,0:15:13.26:182,0,13	0/0:20,0:19:50.87:0,51,616	0/0:10,0:12:33.07:0,33,461	0/0:1,0:2:6.01:0,6,62	1/1:6,0:6:14.77:112,15,0	1/1:5,0:4:5.93:44,6,0	0/1:4,0:4:12.79:45,0,13	0/0:12,0:12:33.10:0,33,571	0/0:6,0:6:8.94:0,9,103	0/0:16,0:18:47.52:0,48,769	0/0:15,0:15:36:0,36,516
chr10	87531750	.	T	TC	1139.07	PASS	AB=0.992;AC=17;AF=0.304;AN=56;BaseQRankSum=6.116;DP=347;FS=1.883;HRun=1;HaplotypeScore=52.3074;InbreedingCoeff=0.5424;MQ=76.59;MQ0=0;MQRankSum=0.167;QD=9.90;ReadPosRankSum=4.166;VQSLOD=1.6502;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:27.08:356,27,0	1/1:6,0:6:11.85:81,12,0	0/0:16,0:10:19.99:0,20,177	0/0:28,0:15:15.44:0,15,153	0/0:10,0:10:30.06:0,30,343	0/1:23,1:24:30.77:231,0,31	1/1:2,0:2:5.87:35,6,0	0/0:41,1:42:99:0,113,1335	0/0:8,0:8:19.25:0,19,216	0/1:11,0:11:21.95:141,0,22	1/1:6,0:6:11.63:73,12,0	0/0:10,0:10:30.06:0,30,354	0/0:6,0:6:18.04:0,18,209	0/0:4,0:4:12.01:0,12,119	0/0:10,0:10:30.06:0,30,331	0/0:10,0:10:24.07:0,24,304	0/1:21,0:20:0.74:125,0,1	0/1:15,0:15:30.71:114,0,31	0/0:21,0:19:56.30:0,56,611	0/0:13,0:13:32.81:0,33,359	0/0:2,0:2:5.88:0,6,42	1/1:6,0:6:14.72:104,15,0	1/1:4,0:4:5.87:35,6,0	0/1:4,0:4:21.24:28,0,21	0/0:13,0:13:33.11:0,33,457	0/0:6,0:6:15:0,15,144	0/0:18,0:18:50.72:0,51,599	0/0:15,0:15:45.02:0,45,500
chr10	87532791	.	AAAAAG	A	712.18	PASS	AB=0.964;AC=11;AF=0.196;AN=56;BaseQRankSum=5.457;DP=576;FS=3.556;HRun=0;HaplotypeScore=111.6840;InbreedingCoeff=0.1794;MQ=62.97;MQ0=11;MQRankSum=-1.885;QD=4.91;ReadPosRankSum=-0.385;VQSLOD=2.2386;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,104,1285	1/1:1,0:1:2.97:20,3,0	0/0:36,0:16:29.05:0,29,387	0/0:21,0:7:17.72:0,18,287	0/0:25,0:25:66.05:0,66,1166	0/0:12,0:12:1.87:0,2,14	0/1:17,0:17:2.82:48,0,3	0/0:32,0:32:68.18:0,68,1030	0/0:23,0:23:57.11:0,57,1011	0/1:16,3:19:30.88:299,0,31	0/1:15,1:16:28.06:121,0,28	0/0:18,0:18:33.97:0,34,702	0/0:18,0:18:42.09:0,42,835	0/0:13,0:13:28.31:0,28,545	0/0:31,0:31:58.40:0,58,1463	0/0:29,0:29:62.86:0,63,1081	1/1:21,2:23:5.56:68,6,0	0/1:15,0:14:16.77:103,0,17	0/0:17,0:17:43.75:0,44,677	0/0:19,0:19:53.39:0,53,1010	0/0:14,0:13:29.99:0,30,494	0/1:12,0:12:62.64:75,0,63	0/1:15,1:16:7.61:47,0,8	0/1:26,0:26:44.63:76,0,45	0/0:18,0:18:42.60:0,43,974	0/0:23,0:23:21.29:0,21,691	0/0:25,0:25:50:0,50,1130	0/0:8,0:7:18.03:0,18,290
chr10	87532792	.	AAAAG	A	1291.43	PASS	AB=0.846;AC=19;AF=0.339;AN=56;BaseQRankSum=5.258;DP=571;FS=2.258;HRun=0;HaplotypeScore=100.7884;InbreedingCoeff=0.8407;MQ=63.07;MQ0=11;MQRankSum=-1.192;QD=8.17;ReadPosRankSum=-1.064;VQSLOD=2.4648;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:67.17:0,67,885	1/1:0,1:1:3.01:44,3,0	0/0:36,0:16:22.17:0,22,306	0/0:21,0:7:11.53:0,12,228	0/0:25,0:25:65.98:0,66,925	1/1:12,0:12:2.52:15,3,0	1/1:16,2:18:14.37:99,14,0	0/0:31,0:31:54.55:0,55,778	0/0:23,0:23:57.06:0,57,801	1/1:17,2:19:34.85:380,35,0	1/1:16,0:16:21.98:152,22,0	0/0:17,0:17:33.71:0,34,547	0/0:17,0:17:39.07:0,39,659	0/0:13,0:13:24.50:0,25,409	0/0:31,0:31:55.27:0,55,1163	0/0:28,0:28:62.19:0,62,885	1/1:6,17:23:5.40:52,5,0	1/1:15,1:15:27.39:224,27,0	0/0:16,0:16:35.74:0,36,499	0/0:19,0:19:53.20:0,53,768	0/0:14,0:13:28.71:0,29,358	0/1:9,2:11:4.95:125,0,5	1/1:2,14:16:7.71:82,8,0	1/1:24,2:26:44.42:317,44,0	0/0:19,0:19:44.99:0,45,816	0/0:23,0:23:19.99:0,20,556	0/0:25,0:25:61.33:0,61,891	0/0:7,0:6:18.02:0,18,239
chr10	87532793	.	AAAG	A	1637.55	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=5.065;DP=568;FS=2.136;HRun=0;HaplotypeScore=90.5714;InbreedingCoeff=0.9185;MQ=63.38;MQ0=11;MQRankSum=-2.669;QD=10.56;ReadPosRankSum=-1.118;VQSLOD=3.2687;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,1:46:29.08:0,29,556	1/1:1,0:1:3:28,3,0	0/0:33,0:14:12.07:0,12,253	0/0:23,0:9:23.60:0,24,248	0/0:25,0:25:59.87:0,60,686	1/1:10,2:12:5.81:51,6,0	1/1:6,12:18:17.71:136,18,0	0/0:29,1:30:57.04:0,57,645	0/0:24,0:24:56.80:0,57,618	1/1:20,0:20:44.72:380,45,0	1/1:16,0:16:26.47:170,26,0	0/0:17,0:17:27.78:0,28,396	0/0:17,0:17:35.92:0,36,504	0/0:13,0:13:23.25:0,23,310	0/0:34,0:34:60.99:0,61,971	0/0:29,0:29:65.02:0,65,733	1/1:22,0:22:5.61:46,6,0	1/1:14,0:14:35.62:261,36,0	0/0:15,0:15:22.88:0,23,360	0/0:19,0:19:47.02:0,47,533	0/0:14,0:13:17.31:0,17,230	1/1:10,0:10:20.01:160,20,0	1/1:16,0:16:8.65:68,9,0	1/1:17,9:26:50.88:545,51,0	0/0:19,0:19:41.99:0,42,638	0/0:23,0:23:19.04:0,19,455	0/0:25,0:25:53.20:0,53,678	0/0:7,0:6:17.99:0,18,193
chr10	87532794	.	AAG	A	1590.43	PASS	AB=0.989;AC=22;AF=0.393;AN=56;BaseQRankSum=5.008;DP=547;FS=6.800;HRun=0;HaplotypeScore=78.9896;InbreedingCoeff=0.7898;MQ=64.94;MQ0=11;MQRankSum=-4.665;QD=7.20;ReadPosRankSum=-1.328;VQSLOD=2.2411;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:42,1:43:16.98:17,0,389	1/1:1,0:1:2.99:23,3,0	0/1:33,0:14:5.77:6,0,191	0/0:24,0:10:23.41:0,23,212	0/0:25,0:25:57.14:0,57,517	1/1:2,9:11:6:59,6,0	1/1:16,1:17:17.90:143,18,0	0/0:30,0:30:54.81:0,55,494	0/0:24,0:24:51.46:0,51,440	1/1:15,1:16:44.88:373,45,0	1/1:3,11:14:27.68:194,28,0	0/0:18,0:18:30.05:0,30,315	0/0:16,0:16:33.22:0,33,379	0/0:12,0:12:23.10:0,23,235	0/0:33,0:33:56.56:0,57,736	0/0:27,0:27:63.51:0,64,591	1/1:22,0:22:5.50:40,5,0	1/1:13,1:14:35.82:277,36,0	0/0:16,0:16:32.15:0,32,311	0/0:20,0:20:30.32:0,30,386	0/0:13,0:13:16.10:0,16,193	1/1:9,0:9:20.95:174,21,0	1/1:16,0:16:8.19:63,8,0	1/1:24,1:25:51.39:429,51,0	0/0:17,0:17:24.48:0,24,483	0/0:22,0:22:17.60:0,18,363	0/0:22,0:22:38.11:0,38,513	0/0:7,0:6:17.98:0,18,169
chr10	87532795	.	AG	A	1336.56	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=6.566;DP=520;FS=31.432;HRun=1;HaplotypeScore=69.1098;InbreedingCoeff=0.8713;MQ=65.56;MQ0=11;MQRankSum=-4.578;QD=9.83;ReadPosRankSum=-2.578;VQSLOD=-0.7251;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:38.20:0,38,485	1/1:1,0:1:2.90:16,3,0	0/0:32,1:14:0.85:0,1,139	0/0:24,0:10:20.69:0,21,173	0/0:22,0:22:25.52:0,26,360	1/1:11,0:11:5.90:38,6,0	1/1:15,1:16:17.80:122,18,0	0/0:28,0:28:38.96:0,39,350	0/0:22,0:22:13.06:0,13,277	1/1:15,0:15:44.44:325,44,0	1/1:14,0:14:28.06:181,28,0	0/0:16,0:16:26.92:0,27,243	0/0:12,3:15:15.49:0,15,268	0/0:11,0:11:22.88:0,23,182	0/0:29,1:30:33.96:0,34,544	0/0:24,1:25:47.68:0,48,465	1/1:20,0:20:5.55:34,6,0	1/1:14,0:14:35.69:257,36,0	0/0:14,1:15:28.49:0,28,270	0/0:19,0:19:6.90:0,7,257	0/0:13,0:13:25.13:0,25,198	1/1:8,0:8:20.87:168,21,0	1/1:15,0:15:9.71:57,10,0	1/1:22,0:22:50.69:342,51,0	0/0:18,0:18:27.10:0,27,400	0/0:20,2:22:14.48:0,14,295	0/0:22,0:22:37.03:0,37,397	0/0:7,0:6:17.95:0,18,149
chr10	87533333	.	G	GA	2100.79	PASS	AB=0.826;AC=28;AF=0.500;AN=56;BaseQRankSum=-5.356;DP=615;FS=0.000;HRun=16;HaplotypeScore=86.8512;InbreedingCoeff=-0.0789;MQ=71.25;MQ0=3;MQRankSum=0.104;QD=4.84;ReadPosRankSum=-4.178;VQSLOD=0.7133;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:43:0.26:0,0,82	0/1:5,1:7:14.53:16,0,15	0/1:25,0:15:2.91:3,0,21	0/1:10,1:7:15.80:21,0,16	0/0:16,0:20:14.60:0,15,67	1/1:7,16:24:10.03:165,10,0	1/1:9,21:31:1.68:224,2,0	0/1:18,10:31:9.43:285,0,9	0/1:21,1:23:1.75:2,0,83	0/0:18,2:23:5.20:0,5,109	0/1:10,1:12:28.72:30,0,29	0/1:32,1:36:21.20:21,0,149	0/1:14,2:19:12.48:12,0,112	0/0:16,0:17:0.89:0,1,57	0/0:32,0:34:12.53:0,13,143	0/0:23,0:24:45.31:0,45,256	0/0:16,0:20:26.98:0,27,144	0/1:10,20:31:4.96:359,0,5	0/1:16,6:26:5.29:182,0,5	1/1:8,8:16:17.71:119,18,0	0/1:5,6:11:15.53:76,0,16	1/1:6,9:16:1.37:122,1,0	1/1:8,9:19:9.17:77,9,0	1/1:12,5:19:2.53:146,3,0	0/1:11,2:14:35.67:39,0,36	1/1:16,5:21:4.66:124,5,0	0/1:8,11:21:6.01:97,0,6	0/1:14,5:20:9.08:137,0,9
chr10	87536167	.	A	AGC	2856.62	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=9.196;DP=665;FS=17.833;HRun=0;HaplotypeScore=97.1352;InbreedingCoeff=0.5309;MQ=74.65;MQ0=9;MQRankSum=-2.494;QD=7.70;ReadPosRankSum=0.101;VQSLOD=1.5047;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,26:35:6.91:93,7,0	1/1:9,0:8:13.56:147,14,0	0/0:35,0:24:62.31:0,62,700	0/0:36,0:30:77.47:0,77,757	0/0:12,0:11:33.02:0,33,366	1/1:8,2:10:19.61:145,20,0	1/1:16,3:19:44.02:376,44,0	0/0:25,0:24:48.26:0,48,526	0/1:23,0:23:97.46:97,0,240	1/1:17,0:17:42.39:319,42,0	1/1:9,2:11:22.49:253,22,0	0/0:33,0:33:77.74:0,78,873	0/0:27,0:27:69.01:0,69,708	0/0:33,0:33:77.62:0,78,814	0/0:33,0:32:89.93:0,90,931	0/0:40,0:40:99:0,108,1190	1/1:15,4:19:31:350,31,0	1/1:4,21:26:20.62:256,21,0	0/1:11,0:11:3.69:4,0,184	0/1:20,0:20:64.25:64,0,221	0/1:43,0:43:46.38:46,0,400	1/1:23,0:23:41.63:327,42,0	1/1:3,1:4:6.02:82,6,0	1/1:21,3:23:26.29:184,26,0	0/0:20,0:20:51.06:0,51,576	0/1:27,0:27:15.37:15,0,464	0/1:38,0:37:99:199,0,321	1/1:12,0:12:0.88:105,1,0
chr10	87536168	.	G	GCA	2544.80	PASS	AB=0.910;AC=29;AF=0.558;AN=52;BaseQRankSum=-0.034;DP=696;FS=7.311;HRun=0;HaplotypeScore=108.4555;InbreedingCoeff=0.2237;MQ=72.16;MQ0=9;MQRankSum=1.071;QD=5.97;ReadPosRankSum=-3.021;VQSLOD=1.7885;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:40:12.94:37,0,13	0/1:8,0:7:26.89:37,0,27	./.	./.	0/0:13,0:12:15.02:0,15,157	0/1:12,0:12:1.68:26,0,2	1/1:24,0:24:15.30:133,15,0	1/1:25,3:27:8.22:65,8,0	1/1:14,9:24:24.07:349,24,0	0/1:17,0:17:11.09:11,0,25	0/1:12,0:12:19.94:93,0,20	0/0:28,0:33:38.60:0,39,406	0/0:22,0:27:1:0,1,272	0/0:29,0:34:35.76:0,36,355	0/0:27,0:33:44.27:0,44,389	0/0:33,0:40:59.48:0,59,571	0/1:22,0:22:95.68:112,0,96	1/1:28,0:28:14.08:123,14,0	1/1:9,2:11:6.02:90,6,0	0/1:12,8:20:44.41:203,0,44	1/1:30,16:48:18.06:268,18,0	1/1:24,0:24:10.11:45,10,0	1/1:5,0:5:5.95:42,6,0	1/1:24,0:24:3.01:30,3,0	0/0:16,0:20:26.88:0,27,265	0/1:21,6:27:57.84:214,0,58	0/1:19,20:38:17.27:576,0,17	1/1:3,9:12:18.06:268,18,0
chr10	87536214	.	TCA	T	1513.18	PASS	AB=0.821;AC=10;AF=0.179;AN=56;BaseQRankSum=6.667;DP=756;FS=10.551;HRun=0;HaplotypeScore=129.5764;InbreedingCoeff=0.6781;MQ=72.68;MQ0=11;MQRankSum=-2.199;QD=11.38;ReadPosRankSum=3.481;VQSLOD=3.1581;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:59.26:0,59,555	0/0:10,0:9:23.34:0,23,250	0/0:27,0:20:57.19:0,57,994	0/0:52,0:33:88.10:0,88,1490	0/0:14,0:13:33.11:0,33,619	0/1:12,8:20:33.57:178,0,34	1/1:20,7:26:11.90:363,12,0	0/0:32,0:32:93.24:0,93,1595	0/0:30,0:30:76.13:0,76,1354	0/0:18,0:18:52.54:0,53,406	0/0:14,0:13:22.04:0,22,323	0/0:45,0:45:99:0,120,2124	0/0:24,0:24:59.97:0,60,1112	0/0:36,0:36:96.29:0,96,1716	0/0:37,0:35:96.31:0,96,1808	0/0:46,0:46:99:0,129,2332	0/0:26,0:26:70.85:0,71,825	0/1:24,2:26:11.59:563,0,12	0/0:8,0:8:24:0,24,398	0/0:18,0:18:47.92:0,48,877	0/0:55,0:55:99:0,138,2444	1/1:20,4:24:39.92:459,40,0	1/1:4,8:12:1.48:4,1,0	1/1:8,16:24:8.52:95,9,0	0/0:26,0:26:63.20:0,63,1138	0/0:26,0:26:70.47:0,70,1298	0/0:29,0:27:69.21:0,69,1252	0/0:13,0:13:39.11:0,39,698
chr10	87536216	.	A	ACT	1046.82	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.331;DP=755;FS=14.552;HRun=0;HaplotypeScore=136.3576;InbreedingCoeff=0.9438;MQ=74.06;MQ0=11;MQRankSum=-4.035;QD=8.24;ReadPosRankSum=2.741;VQSLOD=2.7109;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:57:0,57,769	0/0:12,0:11:24.01:0,24,318	0/0:29,0:22:60.19:0,60,824	0/0:52,0:33:85.29:0,85,1162	0/0:14,0:13:33.10:0,33,453	1/1:18,0:19:17.79:137,18,0	1/1:23,2:24:38.57:319,39,0	0/0:33,0:33:90.29:0,90,1254	0/0:29,0:29:75.22:0,75,1023	0/0:19,0:19:54.16:0,54,706	0/0:12,0:11:30.07:0,30,382	0/0:46,0:46:99:0,114,1624	0/0:22,0:22:60.18:0,60,838	0/0:37,0:37:96.29:0,96,1335	0/0:40,0:38:99:0,99,1398	0/0:46,0:46:99:0,129,1769	0/0:27,0:27:53.72:0,54,868	1/1:24,0:24:42.89:416,43,0	0/0:8,0:8:17.99:0,18,256	0/0:18,0:18:47.91:0,48,639	0/0:53,0:53:99:0,132,1839	1/1:25,0:25:39.24:252,39,0	1/1:10,0:10:0.45:1,0,0	1/1:22,2:24:8.91:92,9,0	0/0:27,0:27:63.20:0,63,882	0/0:28,0:28:69.21:0,69,951	0/0:29,0:27:66.20:0,66,918	0/0:13,0:13:36.10:0,36,512
chr10	87537264	.	T	TC	4853.80	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=7.492;DP=448;FS=5.515;HRun=8;HaplotypeScore=55.2619;InbreedingCoeff=0.9512;MQ=78.20;MQ0=0;MQRankSum=-0.996;QD=25.96;ReadPosRankSum=2.989;VQSLOD=5.7155;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,28:32:75.21:856,75,0	1/1:1,4:5:5.87:69,6,0	0/0:12,0:13:18.46:0,18,143	0/0:8,0:8:17.73:0,18,148	0/0:13,0:13:32.96:0,33,293	1/1:3,13:14:11.68:388,12,0	1/1:4,28:32:69.20:796,69,0	0/0:12,0:12:14.99:0,15,137	0/0:15,0:15:27:0,27,247	1/1:1,9:10:24.03:253,24,0	1/1:0,4:4:9.03:104,9,0	0/0:26,0:26:66.01:0,66,600	0/0:20,0:20:57.01:0,57,516	0/0:16,0:16:48:0,48,431	0/0:18,0:18:50.76:0,51,451	0/0:21,0:21:63.02:0,63,570	1/1:1,14:15:39.12:450,39,0	1/1:1,18:19:45.13:519,45,0	0/0:15,0:15:38.99:0,39,351	0/0:5,0:5:14.99:0,15,132	0/0:36,0:36:93:0,93,839	1/1:1,10:12:30.09:344,30,0	1/1:3,12:15:30.09:346,30,0	1/1:2,25:27:63.19:727,63,0	0/0:16,1:17:10.37:0,10,337	0/0:6,0:6:17.99:0,18,158	0/0:16,0:16:45.02:0,45,411	0/0:4,0:4:11.23:0,11,90
chr10	87538141	.	TAG	T	5203.75	PASS	AB=0.969;AC=24;AF=0.429;AN=56;BaseQRankSum=13.019;DP=613;FS=3.344;HRun=0;HaplotypeScore=104.2761;InbreedingCoeff=0.8308;MQ=81.07;MQ0=6;MQRankSum=-0.442;QD=17.01;ReadPosRankSum=1.912;VQSLOD=4.9969;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,30:40:81.08:955,81,0	1/1:1,11:12:30.09:362,30,0	0/0:47,0:29:30.49:0,30,380	0/1:70,0:38:16.57:17,0,442	0/1:14,1:15:3.08:3,0,426	1/1:4,14:18:30.07:347,30,0	1/1:2,9:11:18.06:217,18,0	0/0:23,0:23:16.53:0,17,537	0/0:18,0:18:36.12:0,36,573	1/1:9,17:25:54.60:615,55,0	1/1:5,12:17:27.08:320,27,0	0/0:13,0:13:36.12:0,36,549	0/0:14,2:16:5.93:0,6,545	0/0:18,1:19:5.94:0,6,586	0/0:27,0:27:75.24:0,75,1178	0/0:20,1:21:8.96:0,9,635	1/1:6,25:31:66.03:774,66,0	1/1:2,14:16:36.11:432,36,0	0/0:20,0:20:48.11:0,48,722	0/0:20,0:20:48.16:0,48,743	0/0:22,1:23:17.99:0,18,775	1/1:4,11:16:33.02:365,33,0	1/1:3,6:9:15.05:181,15,0	1/1:5,19:24:51.16:615,51,0	0/0:15,0:15:33.11:0,33,522	0/0:19,1:20:11.96:0,12,665	0/0:17,0:17:36.12:0,36,577	0/0:8,0:8:21.07:0,21,326
chr10	87540489	.	T	TGG	2746.91	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-3.580;DP=498;FS=0.000;HRun=8;HaplotypeScore=65.5408;InbreedingCoeff=0.8866;MQ=81.54;MQ0=1;MQRankSum=-3.573;QD=24.97;ReadPosRankSum=-1.016;VQSLOD=2.6957;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:12:17.34:60,17,0	0/0:9,0:9:21.05:0,21,234	0/0:20,0:20:6.57:0,7,230	0/0:12,0:11:0.79:0,1,58	0/0:9,0:9:15.03:0,15,167	1/1:1,11:13:32.70:486,33,0	1/1:5,21:28:56.16:807,56,0	0/0:11,0:11:18.03:0,18,199	0/0:15,0:15:17.37:0,17,379	0/0:21,0:21:57.14:0,57,635	0/0:6,0:6:15.04:0,15,167	0/0:45,0:45:99:0,105,1159	0/0:26,0:26:54.06:0,54,592	0/0:25,0:25:63.13:0,63,701	0/0:21,0:21:51.04:0,51,535	0/0:25,0:25:57.13:0,57,635	0/0:23,0:23:57.13:0,57,635	1/1:4,9:15:21.03:293,21,0	0/0:9,0:9:21.04:0,21,234	0/0:7,0:7:21.06:0,21,234	0/0:63,0:63:99:0,147,1626	1/1:1,7:8:18.06:274,18,0	1/1:0,3:3:9.03:143,9,0	1/1:5,23:29:57.14:876,57,0	0/0:13,0:13:36.10:0,36,401	0/0:15,0:15:45.12:0,45,501	0/0:11,0:11:27.07:0,27,299	0/0:2,0:2:3:0,3,33
chr10	87541175	.	G	GC	1645.90	PASS	AB=1.000;AC=21;AF=0.389;AN=54;BaseQRankSum=-6.235;DP=231;FS=2.907;HRun=6;HaplotypeScore=24.9016;InbreedingCoeff=0.8055;MQ=86.61;MQ0=0;MQRankSum=-1.984;QD=21.95;ReadPosRankSum=2.558;VQSLOD=2.1965;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:30.10:377,30,0	1/1:0,1:1:3.01:38,3,0	0/0:9,0:9:10.66:0,11,137	0/1:7,0:7:0.07:0,0,97	0/0:3,0:3:9.02:0,9,92	1/1:1,4:5:9.03:113,9,0	1/1:2,9:11:21.07:264,21,0	0/0:26,0:26:63.14:0,63,642	0/0:10,0:10:30.07:0,30,305	./.	1/1:1,4:5:9.03:113,9,0	0/0:14,0:14:42.06:0,42,417	0/0:7,0:7:21.05:0,21,214	0/0:9,0:9:27.06:0,27,274	0/0:9,0:9:27.05:0,27,269	0/0:3,0:3:9.02:0,9,92	1/1:1,9:10:21.07:260,21,0	1/1:0,12:12:33.11:415,33,0	0/0:7,0:7:18.04:0,18,183	0/0:4,0:4:12.03:0,12,122	0/0:28,0:28:63.12:0,63,635	1/1:0,2:2:3.01:38,3,0	1/1:2,1:3:6.02:70,6,0	1/1:1,4:5:12.04:151,12,0	0/0:8,0:8:24.05:0,24,245	0/0:11,0:11:27.06:0,27,275	0/0:4,0:4:12.03:0,12,122	0/0:1,0:1:2.97:0,3,20
chr10	87542855	.	A	AGGTGGTGGTGGT	2276.11	PASS	AB=1.000;AC=22;AF=0.407;AN=54;BaseQRankSum=2.962;DP=406;FS=1.748;HRun=0;HaplotypeScore=139.2997;InbreedingCoeff=0.6834;MQ=72.75;MQ0=1;MQRankSum=-5.111;QD=16.03;ReadPosRankSum=-3.909;VQSLOD=0.9239;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:9.01:120,9,0	./.	0/1:26,0:20:21.65:22,0,92	0/0:18,0:16:6.02:0,6,144	0/0:10,0:10:9.03:0,9,310	1/1:7,3:9:6.02:349,6,0	1/1:10,2:12:12.04:595,12,0	0/0:14,0:14:14.93:0,15,237	0/0:18,0:18:27.07:0,27,851	1/1:8,0:8:9.03:346,9,0	1/1:5,0:5:2.99:24,3,0	0/0:21,0:21:39.13:0,39,1181	0/0:22,0:22:42.13:0,42,1273	0/0:12,0:12:27.08:0,27,829	0/0:26,0:26:45.14:0,45,1472	0/0:28,0:29:51.28:0,51,1758	1/1:10,0:10:3.01:96,3,0	1/1:12,0:12:6.02:157,6,0	0/1:19,0:18:0.92:1,0,298	0/0:4,0:4:8.82:0,9,194	0/0:30,0:30:42.14:0,42,1368	1/1:9,0:9:6.02:158,6,0	1/1:6,1:8:3.48:176,3,0	1/1:8,0:8:12.04:417,12,0	0/0:18,0:18:36.11:0,36,1162	0/0:15,0:15:18.04:0,18,408	0/0:15,0:14:33.11:0,33,1052	0/0:8,0:8:12.04:0,12,413
chr10	87545110	.	A	AAGG	7870.37	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-12.583;DP=634;FS=9.904;HRun=0;HaplotypeScore=84.4341;InbreedingCoeff=0.9616;MQ=75.85;MQ0=0;MQRankSum=-1.179;QD=35.29;ReadPosRankSum=3.637;VQSLOD=5.3785;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:57.20:1199,57,0	1/1:2,2:4:9.03:187,9,0	0/0:26,0:24:23.43:0,23,669	0/0:20,0:19:4.43:0,4,351	0/0:11,0:11:33.10:0,33,480	1/1:1,10:12:27.09:572,27,0	1/1:3,21:26:39.09:783,39,0	0/0:24,0:24:63.18:0,63,894	0/0:21,0:21:54.18:0,54,812	1/1:3,9:12:27.07:446,27,0	1/1:0,10:11:26.93:412,27,0	0/0:43,0:43:99:0,117,1721	0/0:32,0:32:87.25:0,87,1247	0/0:24,0:24:69.22:0,69,1018	0/0:27,0:27:69.23:0,69,1044	0/0:37,0:37:99:0,99,1472	1/1:7,27:35:54.19:1139,54,0	1/1:5,28:35:54.19:1145,54,0	0/0:26,0:26:64.27:0,64,890	0/0:11,0:11:33.10:0,33,478	0/0:27,0:27:54.16:0,54,790	1/1:0,9:9:21.02:400,21,0	1/1:1,14:15:17.85:381,18,0	1/1:5,29:34:57.20:1208,57,0	0/0:19,0:19:57.17:0,57,822	0/0:23,0:23:9.43:0,9,897	0/0:26,0:25:63.17:0,63,864	0/0:14,0:14:39.09:0,39,548
chr10	87545570	.	C	CA	1725.43	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=-1.944;DP=596;FS=2.178;HRun=10;HaplotypeScore=95.0047;InbreedingCoeff=0.6379;MQ=77.54;MQ0=4;MQRankSum=1.032;QD=8.10;ReadPosRankSum=-1.440;VQSLOD=2.2130;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:38:30.54:0,31,90	0/1:10,0:10:17.07:17,0,22	0/1:35,0:21:25.29:25,0,116	0/0:25,0:15:2.71:0,3,41	0/0:16,0:16:6.99:0,7,188	1/1:1,20:22:11.34:305,11,0	1/1:2,14:18:32.86:311,33,0	0/0:23,0:23:35.38:0,35,222	0/0:20,0:22:44.04:0,44,343	1/1:14,0:14:8.74:65,9,0	0/1:17,0:17:5.80:13,0,6	0/0:29,0:29:27.74:0,28,353	0/0:12,0:14:27.89:0,28,199	0/0:16,0:16:32.86:0,33,263	0/0:27,0:27:56.82:0,57,456	0/0:27,0:28:33.72:0,34,266	0/1:29,0:29:10.52:115,0,11	1/1:5,4:10:26.86:244,27,0	0/0:28,0:28:48.39:0,48,293	0/0:21,0:21:31.71:0,32,227	0/0:11,0:13:23.52:0,24,136	1/1:2,13:15:11.80:267,12,0	1/1:2,8:11:14.38:133,14,0	1/1:6,24:32:44.73:425,45,0	0/0:21,0:21:47.81:0,48,373	0/0:11,0:11:16.80:0,17,110	0/0:20,0:23:33.75:0,34,200	0/0:27,0:27:42.82:0,43,358
chr10	87545686	.	C	CT	14200.70	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-7.776;DP=563;FS=1.921;HRun=2;HaplotypeScore=63.6677;InbreedingCoeff=0.9949;MQ=87.08;MQ0=0;MQRankSum=-3.424;QD=38.91;ReadPosRankSum=1.636;VQSLOD=5.4389;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:93.31:1339,93,0	1/1:0,5:5:15.05:216,15,0	0/0:18,0:18:41.49:0,41,435	0/0:19,0:20:47.33:0,47,518	0/0:13,0:13:33.10:0,33,407	1/1:0,10:10:30.10:432,30,0	1/1:1,19:20:57.19:821,57,0	1/1:2,25:27:78.25:1098,78,0	0/0:19,0:19:51.15:0,51,620	1/1:2,15:17:42.14:604,42,0	1/1:0,10:10:27.09:389,27,0	0/0:24,0:24:72.21:0,72,878	0/0:16,0:16:48.14:0,48,582	0/0:16,0:16:42.13:0,42,521	0/0:33,0:33:93.29:0,93,1153	0/0:25,0:25:69.22:0,69,855	1/1:1,29:30:81.27:1167,81,0	1/1:1,22:23:63.21:907,63,0	1/1:0,21:21:60.18:843,60,0	1/1:0,12:12:36.08:495,36,0	1/1:1,45:46:99:1898,132,0	1/1:2,15:17:45.15:642,45,0	1/1:2,13:15:36.05:518,36,0	1/1:1,17:18:48.16:691,48,0	0/0:14,0:14:36.11:0,36,446	1/1:1,22:23:66.20:931,66,0	1/1:2,29:30:69.23:994,69,0	1/1:0,7:7:15.05:216,15,0
chr10	87546625	.	CT	C	1054.49	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.813;DP=718;FS=25.706;HRun=3;HaplotypeScore=66.6068;InbreedingCoeff=0.9966;MQ=82.89;MQ0=0;MQRankSum=-1.370;QD=27.04;ReadPosRankSum=-0.327;VQSLOD=1.7625;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:39:93.29:1149,93,0	0/0:9,0:9:27.09:0,27,389	0/0:15,0:15:42.11:0,42,584	0/0:25,0:25:69.08:0,69,913	0/0:30,0:30:87.28:0,87,1233	0/0:37,0:37:99:0,111,1554	0/0:29,0:29:84.24:0,84,1185	0/0:47,0:47:99:0,135,1849	0/0:29,0:29:84.28:0,84,1208	0/0:25,0:25:72.22:0,72,990	0/0:17,0:17:42.14:0,42,604	0/0:36,0:36:99:0,102,1435	0/0:31,0:31:90.26:0,90,1229	0/0:28,0:28:81.25:0,81,1130	0/0:24,0:24:69.23:0,69,994	0/0:41,0:41:99:0,123,1738	0/0:27,0:27:81.25:0,81,1143	0/0:8,0:8:24.04:0,24,322	0/0:18,0:18:48.16:0,48,690	0/0:20,0:20:60.18:0,60,844	0/0:21,0:21:60.20:0,60,863	0/0:33,0:33:93.27:0,93,1259	0/0:26,0:26:72.23:0,72,1018	0/0:25,0:25:72.24:0,72,1034	0/0:13,0:13:39.13:0,39,560	0/0:26,0:26:75.24:0,75,1064	0/0:27,0:26:81.23:0,81,1128	0/0:12,0:12:33.02:0,33,395
chr10	87546991	.	CG	C	5348.46	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=11.074;DP=472;FS=2.684;HRun=6;HaplotypeScore=47.7814;InbreedingCoeff=0.9557;MQ=78.35;MQ0=0;MQRankSum=-0.883;QD=26.88;ReadPosRankSum=1.527;VQSLOD=5.0287;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:33:78.20:838,78,0	1/1:3,2:5:3.01:32,3,0	0/0:11,0:11:27.08:0,27,329	0/0:12,0:12:25.89:0,26,300	0/0:6,0:6:18.06:0,18,235	1/1:1,15:16:42.11:451,42,0	1/1:2,31:33:84.21:902,84,0	0/0:13,0:13:24.04:0,24,296	0/0:7,0:7:18.06:0,18,237	1/1:1,11:12:33.08:354,33,0	1/1:2,8:10:21.05:226,21,0	0/0:31,0:31:87.27:0,87,1129	0/0:14,0:14:33.10:0,33,420	0/0:22,0:22:54.16:0,54,696	0/0:24,0:24:69.21:0,69,894	0/0:30,0:30:84.26:0,84,1091	1/1:1,18:19:51.13:548,51,0	1/1:0,29:29:78.20:838,78,0	0/0:17,0:17:48.13:0,48,604	0/0:8,0:8:21.05:0,21,259	0/0:54,0:54:99:0,153,1932	1/1:3,11:14:33.08:354,33,0	1/1:1,13:14:39.10:418,39,0	1/1:0,14:14:36.09:387,36,0	0/0:4,0:4:12.04:0,12,158	0/0:12,0:12:33.09:0,33,419	0/0:5,0:5:15.05:0,15,197	0/0:3,0:3:9.03:0,9,118
chr10	87549945	.	GA	G	853.90	PASS	AB=0.824;AC=14;AF=0.250;AN=56;BaseQRankSum=-2.034;DP=506;FS=5.713;HRun=15;HaplotypeScore=78.3299;InbreedingCoeff=0.6558;MQ=48.88;MQ0=20;MQRankSum=-1.091;QD=5.58;ReadPosRankSum=1.599;VQSLOD=2.7516;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:21:16.60:0,17,87	0/0:3,0:12:20.19:0,20,117	0/0:3,0:1:2.98:0,3,21	0/0:3,0:2:4.88:0,5,20	0/0:27,1:26:20.15:0,20,271	0/0:5,0:10:8.56:0,9,43	0/0:4,0:9:11.82:0,12,67	1/1:19,15:35:30.80:231,31,0	0/1:6,1:7:4.27:4,0,84	0/0:22,0:33:49.01:0,49,339	0/0:18,0:24:48.13:0,48,299	0/0:18,0:18:26.68:0,27,211	0/0:14,0:15:23.19:0,23,223	0/0:12,0:13:20.11:0,20,201	0/0:15,1:17:6.79:0,7,200	0/0:19,2:21:13.94:0,14,211	0/0:17,0:31:25.72:0,26,156	0/0:9,0:14:17.31:0,17,96	1/1:11,9:18:29.45:191,29,0	1/1:11,10:21:23.46:154,23,0	1/1:3,2:4:2.94:19,3,0	0/0:2,0:3:2.84:0,3,14	0/0:12,0:22:15.85:0,16,105	0/0:8,0:8:5.41:0,5,28	0/0:26,2:28:29.83:0,30,474	1/1:8,9:16:25.93:160,26,0	1/1:12,13:27:5.49:187,5,0	0/1:12,5:14:7.72:81,0,8
chr10	87551166	.	G	GT	349.76	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.030;DP=694;FS=11.775;HRun=8;HaplotypeScore=67.3847;InbreedingCoeff=0.9604;MQ=66.17;MQ0=3;MQRankSum=-1.733;QD=16.66;ReadPosRankSum=-0.168;VQSLOD=2.3484;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,14:21:23.12:443,23,0	0/0:7,0:7:15:0,15,137	0/0:30,0:21:34.49:0,34,292	0/0:14,0:9:14.04:0,14,119	0/0:42,0:42:99:0,111,1004	0/0:21,0:21:60.03:0,60,549	0/0:17,0:17:48.03:0,48,439	0/0:31,0:31:65.95:0,66,640	0/0:24,0:24:65.98:0,66,590	0/0:30,0:30:75.02:0,75,686	0/0:27,0:27:78.04:0,78,714	0/0:43,0:43:99:0,117,1054	0/0:27,0:27:81.02:0,81,735	0/0:20,0:20:54.03:0,54,494	0/0:35,0:35:99:0,102,920	0/0:39,0:39:99:0,108,980	0/0:26,0:26:56.95:0,57,508	0/0:16,0:15:41.99:0,42,378	0/0:35,0:34:84.04:0,84,769	0/0:23,0:23:63.02:0,63,572	0/0:10,0:10:24.01:0,24,220	0/0:12,0:12:30:0,30,270	0/0:16,0:16:45.02:0,45,412	0/0:16,0:16:48:0,48,432	0/0:35,0:35:99:0,99,901	0/0:29,0:29:75.02:0,75,683	0/0:26,0:26:72.01:0,72,653	0/0:22,0:22:60.03:0,60,549
chr10	87551294	.	C	CA	493.30	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.792;DP=636;FS=2.122;HRun=3;HaplotypeScore=64.2322;InbreedingCoeff=0.9942;MQ=81.66;MQ0=0;MQRankSum=-3.504;QD=32.89;ReadPosRankSum=2.511;VQSLOD=4.1830;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:42.14:588,42,0	0/0:7,0:7:21.06:0,21,252	0/0:23,0:23:57.16:0,57,668	0/0:21,1:22:25.79:0,26,592	0/0:25,0:25:72.22:0,72,864	0/0:26,0:26:75.23:0,75,900	0/0:36,0:36:99:0,102,1223	0/0:42,0:42:99:0,114,1342	0/0:19,0:19:51.16:0,51,612	0/0:17,0:17:48.15:0,48,573	0/0:20,0:20:60.16:0,60,706	0/0:30,0:30:90.25:0,90,1057	0/0:29,0:29:78.24:0,78,936	0/0:17,0:17:45.14:0,45,540	0/0:29,0:29:78.24:0,78,936	0/0:33,0:33:96.28:0,96,1140	0/0:26,0:26:72.19:0,72,849	0/0:20,0:20:54.16:0,54,647	0/0:20,0:20:54.15:0,54,628	0/0:30,0:30:87.27:0,87,1044	0/0:27,0:27:78.21:0,78,912	0/0:19,0:19:57.17:0,57,684	0/0:13,0:13:36.11:0,36,432	0/0:16,0:16:48.15:0,48,576	0/0:17,0:17:51.16:0,51,612	0/0:18,0:18:51.16:0,51,612	0/0:29,0:29:87.27:0,87,1044	0/0:11,0:11:33.10:0,33,395
chr10	87552236	.	TAC	T	2466.52	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.701;DP=1207;FS=10.366;HRun=0;HaplotypeScore=160.7588;InbreedingCoeff=0.9987;MQ=55.44;MQ0=24;MQRankSum=0.366;QD=20.73;ReadPosRankSum=1.660;VQSLOD=3.7838;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,2:49:44.87:0,45,1601	1/1:2,10:12:24.02:286,24,0	0/0:49,0:8:23.96:0,24,287	0/0:39,0:15:39.04:0,39,548	0/0:35,1:35:49.09:0,49,1284	0/0:30,0:30:66.16:0,66,1005	0/0:36,0:36:72.25:0,72,1173	0/0:65,0:51:99:0,119,1708	0/0:38,0:38:81.28:0,81,1345	1/1:8,38:44:99:1291,102,0	1/1:5,26:30:40.37:499,40,0	0/0:67,0:66:99:0,174,2735	0/0:57,0:57:99:0,148,2404	0/0:54,1:55:94.37:0,94,2090	0/0:69,0:69:99:0,156,2911	0/0:83,1:84:99:0,179,3427	1/1:5,25:27:33.18:551,33,0	0/0:30,0:28:60.12:0,60,939	0/0:31,0:25:60.11:0,60,927	0/0:33,0:32:77.78:0,78,1242	0/0:81,0:80:99:0,176,3198	0/0:32,0:32:69.18:0,69,1057	0/0:24,0:24:48.15:0,48,769	0/0:42,0:42:90:0,90,1454	0/0:26,0:26:63.19:0,63,1010	0/0:64,1:65:99:0,142,2767	0/0:33,0:31:87.10:0,87,1377	0/0:17,0:17:45.13:0,45,721
chr10	87552260	.	T	TAC	4282.56	PASS	AB=0.615;AC=11;AF=0.196;AN=56;BaseQRankSum=-12.982;DP=1100;FS=1.377;HRun=0;HaplotypeScore=144.6113;InbreedingCoeff=0.8791;MQ=56.70;MQ0=18;MQRankSum=1.020;QD=24.75;ReadPosRankSum=2.372;VQSLOD=5.6935;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:59.50:0,59,936	0/0:8,0:9:17.71:0,18,183	0/0:49,0:12:20.73:0,21,232	0/0:38,0:19:21.35:0,21,389	0/0:33,0:33:81.25:0,81,993	0/1:9,15:24:37.72:453,0,38	1/1:7,25:33:51.17:832,51,0	0/0:58,0:54:97.50:0,98,1493	0/0:25,0:25:57.13:0,57,675	0/0:46,0:44:99:0,99,1199	0/0:25,0:23:48.12:0,48,575	0/0:58,0:59:99:0,138,1648	0/0:47,0:48:99:0,120,1441	0/0:42,0:43:99:0,120,1428	0/0:68,0:68:99:0,163,1992	0/0:84,0:84:99:0,208,2467	0/0:28,0:25:54.17:0,54,664	1/1:7,21:28:36.59:588,37,0	0/0:31,0:25:54.16:0,54,646	0/0:31,0:31:81.09:0,81,958	0/0:82,0:83:99:0,152,1882	1/1:6,23:29:14.25:746,14,0	1/1:4,19:23:42.14:685,42,0	1/1:8,27:36:60.20:979,60,0	0/0:19,0:19:45.11:0,45,528	0/0:60,0:60:99:0,132,1611	0/0:29,0:28:60.14:0,60,696	0/0:16,0:16:42.13:0,42,514
chr10	87555039	.	T	TA	1271.27	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.372;DP=622;FS=1.237;HRun=7;HaplotypeScore=67.5925;InbreedingCoeff=0.9136;MQ=65.08;MQ0=1;MQRankSum=-1.716;QD=30.27;ReadPosRankSum=1.215;VQSLOD=4.0723;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,39:42:99:1366,116,0	0/0:7,0:7:18.02:0,18,174	0/0:23,0:20:44.97:0,45,413	0/0:17,0:13:8.13:0,8,188	0/0:30,0:30:90.15:0,90,868	0/0:20,0:20:54.08:0,54,521	0/0:18,0:18:51.08:0,51,492	0/0:27,0:27:40.37:0,40,510	0/0:20,0:20:51.08:0,51,492	0/0:16,0:16:48.08:0,48,462	0/0:11,0:11:30.03:0,30,284	0/0:33,0:33:93.13:0,93,892	0/0:26,0:26:62.95:0,63,588	0/0:28,0:28:81.12:0,81,775	0/0:32,0:32:84.11:0,84,805	0/0:34,0:34:87.12:0,87,838	0/0:30,0:30:60.60:0,61,751	0/0:36,0:36:93.14:0,93,897	0/0:18,0:18:45.07:0,45,434	0/0:16,0:16:42.06:0,42,406	0/0:16,0:16:42.07:0,42,405	0/0:13,0:13:36.06:0,36,345	0/0:19,0:19:47.11:0,47,440	0/0:26,0:26:66.10:0,66,637	0/0:13,0:13:36.06:0,36,348	0/0:21,0:21:60.09:0,60,579	0/0:24,0:23:57.07:0,57,544	0/0:5,0:5:15.02:0,15,145
chr10	87555337	.	G	GA	1707.35	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-7.830;DP=618;FS=2.531;HRun=8;HaplotypeScore=62.7946;InbreedingCoeff=0.9867;MQ=84.28;MQ0=0;MQRankSum=-4.383;QD=24.05;ReadPosRankSum=0.416;VQSLOD=4.4540;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.01:0,63,567	1/1:1,7:8:15.04:169,15,0	0/0:17,0:16:30.03:0,30,243	0/0:27,0:27:37.77:0,38,409	0/0:29,0:29:84.01:0,84,757	0/0:23,0:23:60.02:0,60,544	0/0:15,0:16:38.02:0,38,326	0/0:42,0:42:83.96:0,84,747	0/0:13,0:13:30:0,30,271	1/1:3,20:23:57.17:660,57,0	1/1:0,7:7:20.99:214,21,0	0/0:28,0:28:78.01:0,78,704	0/0:24,0:24:69.02:0,69,627	0/0:30,0:30:83.99:0,84,751	0/0:34,0:34:90:0,90,810	0/0:59,0:59:99:0,117,1342	1/1:2,31:33:72.20:822,72,0	0/0:29,0:29:74.98:0,75,673	0/0:14,0:14:39:0,39,349	0/0:15,0:15:44.99:0,45,402	0/0:6,0:6:15.01:0,15,137	0/0:15,0:15:39.02:0,39,357	0/0:12,0:12:23.98:0,24,214	0/0:24,0:24:69.04:0,69,631	0/0:9,0:9:21:0,21,192	0/0:19,0:19:48.01:0,48,436	0/0:29,0:29:75.01:0,75,681	0/0:11,0:11:20.92:0,21,170
chr10	87555649	.	C	CG	2095.58	PASS	AB=0.741;AC=29;AF=0.518;AN=56;BaseQRankSum=-2.742;DP=427;FS=14.259;HRun=10;HaplotypeScore=64.9999;InbreedingCoeff=0.1712;MQ=77.84;MQ0=0;MQRankSum=-1.256;QD=7.43;ReadPosRankSum=-2.353;VQSLOD=0.0445;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,1:14:5.80:33,6,0	1/1:3,0:3:3:26,3,0	0/1:11,0:11:2.86:3,0,76	0/1:16,0:16:1.70:2,0,83	0/0:9,0:9:20.96:0,21,172	0/1:7,9:16:3.59:171,0,4	0/1:5,13:19:20.09:240,0,20	1/1:8,10:18:21.30:186,21,0	0/0:15,0:15:20.91:0,21,172	1/1:4,0:6:2.84:14,3,0	1/1:4,0:4:2.73:25,3,0	0/0:24,0:25:18.99:0,19,300	0/0:14,0:14:26.91:0,27,221	0/0:17,0:19:34.95:0,35,275	0/0:24,1:25:12.87:0,13,312	0/0:24,2:26:21.89:0,22,386	1/1:8,1:19:20.23:118,20,0	0/1:6,20:27:35.17:264,0,35	0/1:11,2:13:49.61:50,0,54	0/1:6,1:7:18.62:26,0,19	0/1:10,23:33:53.34:307,0,53	0/1:4,2:6:37.26:52,0,37	1/1:4,1:5:9.49:92,9,0	0/1:13,18:31:4.41:371,0,4	0/0:12,0:12:17.96:0,18,148	1/1:4,7:11:8.98:77,9,0	1/1:6,10:16:1.89:193,2,0	0/1:3,4:7:18.58:26,0,19
chr10	87557564	.	A	AT	3468.92	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-10.916;DP=642;FS=1.757;HRun=9;HaplotypeScore=63.8313;InbreedingCoeff=0.9848;MQ=71.03;MQ0=0;MQRankSum=0.497;QD=26.08;ReadPosRankSum=1.062;VQSLOD=4.2613;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:86.97:0,87,755	0/0:11,0:11:29.98:0,30,257	0/0:12,0:12:20.97:0,21,176	0/0:10,0:9:11.91:0,12,95	0/0:21,0:22:62.01:0,62,523	1/1:3,28:31:75.20:830,75,0	1/1:3,19:22:51.14:564,51,0	0/0:42,0:42:99:0,104,907	0/0:18,0:18:53.99:0,54,469	0/0:21,0:21:53.98:0,54,469	0/0:21,1:23:25.84:0,26,442	0/0:33,0:33:71.95:0,72,625	0/0:17,0:17:47.97:0,48,413	0/0:19,0:19:50.97:0,51,439	0/0:32,0:32:89.96:0,90,781	0/0:32,0:32:86.98:0,87,755	0/0:34,0:34:89.89:0,90,769	1/1:2,16:19:38.17:459,38,0	0/0:21,0:21:44.98:0,45,391	0/0:27,0:27:74.98:0,75,651	0/0:19,0:19:47.99:0,48,417	1/1:1,20:21:57.15:631,57,0	1/1:1,15:17:38.94:411,39,0	1/1:4,19:23:11.17:575,11,0	0/0:23,0:23:65.99:0,66,573	0/0:19,0:19:53.96:0,54,463	0/0:22,0:22:53.98:0,54,469	0/0:20,0:20:56.99:0,57,495
chr10	87560225	.	CAG	C	1509.50	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.268;DP=525;FS=2.045;HRun=0;HaplotypeScore=77.2504;InbreedingCoeff=0.9900;MQ=75.66;MQ0=1;MQRankSum=-1.957;QD=16.96;ReadPosRankSum=3.017;VQSLOD=3.7986;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:38.98:0,39,495	0/0:10,0:10:29.09:0,29,167	0/0:22,0:20:45.13:0,45,544	0/0:13,0:14:26.86:0,27,342	0/0:20,0:20:35.56:0,36,467	1/1:2,12:13:21.06:290,21,0	1/1:5,15:20:30.08:406,30,0	0/0:15,0:15:29.99:0,30,468	0/0:18,0:18:48.02:0,48,719	0/0:18,0:18:38.03:0,38,253	0/0:17,0:17:40.69:0,41,281	0/0:21,0:21:51.01:0,51,734	0/0:19,0:19:42.01:0,42,643	0/0:31,0:31:75.15:0,75,1086	0/0:26,0:26:59.74:0,60,910	0/0:35,0:35:81.59:0,82,1279	0/0:26,0:26:70.12:0,70,429	1/1:1,11:12:18.05:247,18,0	0/0:17,0:17:35.87:0,36,433	0/0:20,0:20:44.75:0,45,516	0/0:15,0:15:35.89:0,36,515	1/1:5,9:14:15.16:195,15,0	1/1:4,11:15:18.05:239,18,0	1/1:5,9:14:24.06:317,24,0	0/0:13,0:13:20.95:0,21,306	0/0:25,0:25:45.09:0,45,609	0/0:21,0:21:47.85:0,48,647	0/0:11,0:11:21.07:0,21,361
chr10	87560226	.	AGAG	A	559	PASS	AB=0.938;AC=11;AF=0.196;AN=56;BaseQRankSum=8.161;DP=521;FS=2.901;HRun=0;HaplotypeScore=89.1640;InbreedingCoeff=0.9104;MQ=74.25;MQ0=1;MQRankSum=-3.197;QD=6.28;ReadPosRankSum=3.237;VQSLOD=2.3995;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:38.98:0,39,589	0/0:11,0:11:30.03:0,30,274	0/0:21,0:20:44.95:0,45,727	0/0:12,0:12:26.98:0,27,466	0/0:20,0:20:35.80:0,36,587	1/1:13,1:13:19.19:120,19,0	1/1:17,2:19:27.45:192,27,0	0/0:15,0:15:30.97:0,31,595	0/0:18,0:18:48.12:0,48,908	0/0:17,0:17:37.01:0,37,325	0/0:18,0:18:50.30:0,50,413	0/0:23,0:23:54.14:0,54,989	0/0:19,0:19:45.03:0,45,827	0/0:31,0:31:75.17:0,75,1376	0/0:26,0:26:59.75:0,60,1142	0/0:33,0:33:81.69:0,82,1614	0/0:26,0:26:72.03:0,72,644	1/1:11,1:12:16.40:107,16,0	0/0:16,0:16:36.07:0,36,543	0/0:20,0:20:45.01:0,45,639	0/0:15,0:15:36.11:0,36,690	0/1:14,1:15:3.91:46,0,4	1/1:14,1:15:14.97:100,15,0	1/1:12,2:14:22.09:170,22,0	0/0:13,0:13:21.05:0,21,391	0/0:26,0:26:48.10:0,48,799	0/0:19,0:20:48.12:0,48,876	0/0:9,0:9:21.07:0,21,463
chr10	87560228	.	AG	A	1136.88	PASS	AB=0.939;AC=20;AF=0.357;AN=56;BaseQRankSum=8.649;DP=520;FS=6.718;HRun=10;HaplotypeScore=75.7903;InbreedingCoeff=0.2610;MQ=77.11;MQ0=1;MQRankSum=-2.058;QD=4.57;ReadPosRankSum=4.462;VQSLOD=0.6588;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:21.05:0,21,224	1/1:1,11:12:26.99:234,27,0	0/0:24,0:22:32.85:0,33,340	0/0:13,0:13:20.72:0,21,206	0/0:18,0:18:27.48:0,27,283	0/1:15,0:14:8.47:8,0,44	0/1:21,0:21:14.74:15,0,52	0/0:14,1:15:4.08:0,4,263	0/0:15,1:16:13.05:0,13,365	1/1:9,7:16:20.97:182,21,0	1/1:5,11:17:32.03:266,32,0	0/0:25,0:25:19.08:0,19,422	0/0:19,2:21:21.95:0,22,428	0/0:28,0:28:60.13:0,60,640	0/0:29,0:33:47.96:0,48,512	0/0:28,2:30:43.14:0,43,704	1/1:8,18:26:53.98:469,54,0	1/1:12,0:12:6.92:20,7,0	0/1:14,3:17:25.09:25,0,182	0/1:19,3:22:45.14:45,0,215	0/1:12,3:15:19.02:19,0,256	0/1:15,0:15:1.75:2,0,20	0/1:16,0:16:7.42:7,0,19	0/1:14,0:14:14.81:15,0,34	0/1:10,1:11:5.01:5,0,171	0/0:20,0:20:30.06:0,30,321	0/1:18,2:20:4.01:4,0,398	0/0:8,0:8:21.06:0,21,232
chr10	87562195	.	C	CT	633.02	PASS	AB=0.974;AC=4;AF=0.071;AN=56;BaseQRankSum=0.661;DP=550;FS=0.000;HRun=11;HaplotypeScore=82.2331;InbreedingCoeff=0.4436;MQ=73.47;MQ0=1;MQRankSum=-0.762;QD=9.59;ReadPosRankSum=-3.921;VQSLOD=2.0381;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,24:37:37.56:691,38,0	0/0:9,0:9:17.91:0,18,139	0/0:13,0:15:9.91:0,10,145	0/1:11,0:11:14.25:42,0,14	0/0:16,0:18:30.86:0,31,220	0/0:17,0:17:31.89:0,32,238	0/0:14,0:14:26.86:0,27,209	0/0:20,0:21:37.83:0,38,284	0/0:17,0:17:38.80:0,39,302	0/0:16,0:17:34.90:0,35,261	0/0:12,0:12:23.16:0,23,185	0/0:27,0:27:65.69:0,66,511	0/0:24,0:25:58.77:0,59,447	0/0:15,0:15:32.81:0,33,255	0/0:20,0:22:40.76:0,41,305	0/0:16,0:16:41.83:0,42,325	0/0:29,0:29:53.73:0,54,411	0/0:19,0:22:41.95:0,42,296	0/0:22,0:22:47.77:0,48,368	0/0:22,1:24:43.78:0,44,329	0/0:20,3:23:14.35:0,14,295	0/0:24,0:24:27.91:0,28,294	0/1:17,1:17:14.29:14,0,96	0/0:19,0:19:25.39:0,25,190	0/0:15,0:15:32.81:0,33,250	0/0:18,2:20:17.35:0,17,317	0/0:21,1:22:17.23:0,17,318	0/0:17,1:18:11.35:0,11,271
chr10	87562246	.	G	GGAAAA	1922.03	PASS	AB=0.630;AC=11;AF=0.196;AN=56;BaseQRankSum=10.282;DP=559;FS=30.905;HRun=0;HaplotypeScore=132.2819;InbreedingCoeff=0.2810;MQ=76.99;MQ0=1;MQRankSum=-2.361;QD=11.72;ReadPosRankSum=-0.420;VQSLOD=1.2571;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:99:233,0,135	0/0:1,0:7:1.13:0,1,19	0/0:17,0:14:24.87:0,25,400	0/0:28,0:19:9.36:0,9,328	0/0:13,0:13:39.02:0,39,753	0/1:4,0:21:12.39:376,0,12	1/1:6,1:11:0.60:255,1,0	0/0:22,0:22:59.82:0,60,1228	0/0:17,0:17:48.06:0,48,1004	0/0:3,0:15:30.39:0,30,216	0/1:1,0:14:16.79:17,0,51	0/0:29,0:29:87.24:0,87,1738	0/0:19,0:19:51.06:0,51,878	0/0:25,0:25:75.20:0,75,1523	0/0:22,0:22:63.10:0,63,1181	0/0:24,0:24:72.23:0,72,1588	0/0:2,0:27:35.44:0,35,144	1/1:4,0:25:5.43:482,5,0	0/0:20,0:20:60.15:0,60,1224	0/0:18,0:18:54.11:0,54,1017	0/0:22,0:22:63.19:0,63,1335	0/1:3,0:18:56.39:210,0,56	0/1:3,0:21:36.77:165,0,37	1/1:4,0:19:9.12:330,9,0	0/0:18,0:18:51.14:0,51,1104	0/0:23,0:22:44.11:0,44,1302	0/0:16,0:16:31.68:0,32,776	0/0:13,0:13:36.07:0,36,735
chr10	87562251	.	A	AAAAG	3680.88	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=8.739;DP=556;FS=22.837;HRun=0;HaplotypeScore=119.2936;InbreedingCoeff=0.3843;MQ=77.68;MQ0=1;MQRankSum=-1.249;QD=17.04;ReadPosRankSum=1.914;VQSLOD=1.8525;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,23:33:81.04:1606,81,0	1/1:7,0:7:9.12:32,9,0	0/1:18,0:15:24.17:24,0,143	0/0:30,0:20:5.43:0,5,104	0/0:13,0:13:36.07:0,36,517	1/1:21,0:20:9.24:421,9,0	0/1:13,0:13:42.42:212,0,42	0/0:23,0:23:63.06:0,63,917	0/0:17,0:17:47.93:0,48,728	0/0:14,0:14:3.18:0,3,94	0/1:14,0:14:9.71:10,0,25	0/0:28,0:28:75.20:0,75,1181	0/0:16,0:16:39.02:0,39,512	0/0:24,0:24:66.15:0,66,1039	0/0:23,0:23:54.14:0,54,832	0/0:27,0:27:75.21:0,75,1184	0/1:27,0:27:24.79:28,0,25	1/1:25,0:25:1.54:649,2,0	0/0:20,0:20:35.09:0,35,707	0/0:14,0:14:39.09:0,39,601	0/0:21,0:21:58.68:0,59,858	0/1:15,0:15:8.97:231,0,9	0/1:23,0:22:9.02:99,0,9	1/1:20,0:20:7.17:368,7,0	0/0:19,0:19:54.14:0,54,838	0/0:22,0:21:55.10:0,55,858	0/0:16,0:16:29.82:0,30,476	0/0:13,0:13:30.07:0,30,465
chr10	87563145	.	GA	G	2603.27	PASS	AB=0.870;AC=15;AF=0.268;AN=56;BaseQRankSum=10.621;DP=600;FS=6.025;HRun=10;HaplotypeScore=66.8398;InbreedingCoeff=0.7734;MQ=82.99;MQ0=2;MQRankSum=-0.800;QD=17.59;ReadPosRankSum=-1.616;VQSLOD=3.6717;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:5.94:0,6,190	0/0:10,1:11:4.04:0,4,273	0/0:38,1:27:12.50:0,13,294	0/0:25,0:21:14.71:0,15,283	0/0:29,0:29:75.17:0,75,813	0/0:23,1:24:43.14:0,43,704	0/0:15,1:16:10.02:0,10,321	1/1:5,22:28:67.97:569,68,0	0/0:21,0:21:60.13:0,60,644	0/0:22,0:22:57.15:0,57,629	0/0:22,0:22:60.13:0,60,645	0/0:23,0:23:57.15:0,57,631	0/0:19,2:21:8.94:0,9,531	0/0:29,2:31:48.06:0,48,797	0/0:24,1:25:34.12:0,34,604	0/0:23,1:25:42.91:0,43,664	0/0:30,0:30:75.20:0,75,830	0/1:17,3:20:26.96:27,0,413	1/1:2,10:12:29.99:259,30,0	1/1:3,18:21:50.97:443,51,0	1/1:1,8:9:23.99:208,24,0	0/0:14,1:15:19.05:0,19,422	0/0:14,1:15:10.02:0,10,316	0/0:17,2:19:2.09:0,2,461	0/0:21,2:23:2.04:0,2,469	1/1:1,20:21:59.93:510,60,0	1/1:4,23:27:62.98:547,63,0	1/1:1,9:10:26.98:234,27,0
chr10	87563386	.	T	TGTTTTG	411.57	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.018;DP=578;FS=1.321;HRun=0;HaplotypeScore=145.9985;InbreedingCoeff=0.9738;MQ=71.32;MQ0=8;MQRankSum=-1.775;QD=15.24;ReadPosRankSum=1.543;VQSLOD=3.2854;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,14:27:17.73:502,18,0	0/0:7,0:7:21:0,21,316	0/0:40,0:18:34.26:0,34,333	0/0:23,0:10:16.16:0,16,120	0/0:23,0:23:68.05:0,68,851	0/0:21,0:21:63.14:0,63,973	0/0:24,0:24:54.08:0,54,795	0/0:29,0:27:62.91:0,63,777	0/0:18,0:18:51.80:0,52,697	0/0:15,0:15:38.02:0,38,444	0/0:13,0:13:38.70:0,39,592	0/0:17,0:17:42.02:0,42,578	0/0:16,0:16:48:0,48,594	0/0:15,0:15:42.13:0,42,661	0/0:21,0:21:48.11:0,48,705	0/0:29,0:29:76.08:0,76,1154	0/0:33,0:33:87.03:0,87,1232	0/0:14,0:14:42.09:0,42,644	0/0:24,0:24:62.55:0,63,698	0/0:20,0:20:54.67:0,55,543	0/0:11,0:11:29.70:0,30,408	0/0:16,0:16:45.07:0,45,649	0/0:18,0:18:47.96:0,48,708	0/0:31,0:31:84.15:0,84,1373	0/0:17,0:16:45.07:0,45,627	0/0:21,0:21:63.14:0,63,883	0/0:15,0:15:38.90:0,39,389	0/0:20,0:20:32.34:0,32,371
chr10	87564976	.	GC	G	786	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.406;DP=661;FS=1.722;HRun=1;HaplotypeScore=65.4365;InbreedingCoeff=0.9805;MQ=76.49;MQ0=0;MQRankSum=-3.051;QD=32.75;ReadPosRankSum=-0.345;VQSLOD=3.2073;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:63.21:881,63,0	0/0:15,0:15:45.15:0,45,719	0/0:23,0:22:49.44:0,49,894	0/0:27,0:23:59.42:0,59,942	0/0:20,0:20:54.18:0,54,850	0/0:18,0:18:54.18:0,54,863	0/0:33,0:33:99:0,99,1554	0/0:29,0:29:87.29:0,87,1366	0/0:22,0:22:66.23:0,66,1055	0/0:20,0:20:60.20:0,60,937	0/0:14,0:14:42.14:0,42,672	0/0:32,0:32:96.33:0,96,1534	0/0:27,0:27:81.26:0,81,1270	0/0:17,0:17:51.17:0,51,815	0/0:36,0:36:99:0,108,1721	0/0:36,0:36:99:0,108,1722	0/0:33,0:33:96.30:0,96,1507	0/0:24,0:24:72.25:0,72,1148	0/0:20,0:20:51.15:0,51,791	0/0:20,0:20:60.20:0,60,959	0/0:45,0:45:99:0,129,2062	0/0:7,0:7:21.07:0,21,335	0/0:14,0:14:42.14:0,42,669	0/0:29,0:29:87.27:0,87,1360	0/0:24,0:24:69.24:0,69,1099	0/0:23,0:23:66.21:0,66,1032	0/0:24,0:24:72.25:0,72,1147	0/0:5,0:5:15.05:0,15,240
chr10	87565575	.	CTGTGTGTGTGTGTG	C	612.22	PASS	AC=10;AF=0.217;AN=46;BaseQRankSum=4.148;DP=608;FS=8.692;HRun=0;HaplotypeScore=177.2043;InbreedingCoeff=0.6419;MQ=65.46;MQ0=48;MQRankSum=-4.031;QD=6.58;ReadPosRankSum=1.554;VQSLOD=2.2602;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:6.02:0,6,131	./.	./.	0/0:56,0:26:0.47:0,0,1	0/0:21,0:21:21.05:0,21,800	1/1:11,0:6:2.96:19,3,0	1/1:30,0:27:3.07:169,3,0	0/0:40,0:39:19.83:0,20,490	0/0:13,0:10:6.02:0,6,345	1/1:10,2:12:4.69:228,5,0	0/0:5,1:8:0.94:0,1,1	0/0:26,0:26:36.12:0,36,1486	0/0:9,0:9:12.04:0,12,631	0/0:18,0:18:21.07:0,21,814	0/0:22,0:22:18.06:0,18,834	0/0:33,0:32:20.99:0,21,866	1/1:16,2:18:6.02:118,6,0	1/1:22,0:21:8.92:207,9,0	0/0:18,0:17:12.01:0,12,326	0/0:15,0:14:9.03:0,9,389	0/0:30,0:29:6.02:0,6,342	./.	./.	./.	0/0:14,0:13:12.04:0,12,477	0/0:23,0:21:36.12:0,36,1593	0/0:17,0:17:21.07:0,21,952	0/0:11,0:8:3.01:0,3,47
chr10	87565589	.	GTGTGTGTGTGTGT	G	910.87	PASS	AB=0.759;AC=11;AF=0.196;AN=56;BaseQRankSum=4.424;DP=580;FS=2.040;HRun=0;HaplotypeScore=135.2134;InbreedingCoeff=0.4707;MQ=49.37;MQ0=82;MQRankSum=-2.744;QD=6.28;ReadPosRankSum=1.269;VQSLOD=2.7603;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:29:39.56:0,40,582	0/0:7,0:7:9.03:0,9,115	0/0:44,0:7:18.06:0,18,223	0/0:48,0:18:27.13:0,27,463	0/0:18,0:18:39.13:0,39,1174	1/1:8,0:7:8.80:144,9,0	1/1:3,20:24:3.88:275,4,0	0/0:33,0:30:88.20:0,88,1709	0/0:12,0:9:18.06:0,18,532	0/1:9,0:7:99:133,0,141	0/0:8,0:8:3.95:0,4,39	0/0:27,0:25:51.17:0,51,1885	0/0:10,0:10:24.08:0,24,967	0/0:23,0:23:40.07:0,40,1207	0/0:19,0:18:27.56:0,28,1061	0/0:30,0:27:39.37:0,39,1208	0/1:18,0:13:9.89:10,0,300	0/1:5,16:19:22.04:367,0,22	0/0:21,0:19:22.71:0,23,943	0/0:13,0:12:18.53:0,19,565	0/0:25,0:20:26.74:0,27,628	1/1:8,0:6:9.03:120,9,0	0/1:6,10:13:0.20:0,0,1	0/1:11,0:21:0.05:0,0,0	0/0:17,0:16:15.05:0,15,616	0/0:23,0:19:54.18:0,54,2342	0/0:16,0:15:42.14:0,42,1386	0/0:9,0:5:15.05:0,15,231
chr10	87565626	.	TGAGAGAGAGAGAGAGA	T	419.09	PASS	AB=0.833;AC=8;AF=0.160;AN=50;BaseQRankSum=4.720;DP=489;FS=12.890;HRun=0;HaplotypeScore=152.0097;InbreedingCoeff=0.2560;MQ=36.85;MQ0=70;MQRankSum=-1.795;QD=4.76;ReadPosRankSum=-1.114;VQSLOD=2.0905;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:28:26.06:0,26,573	./.	./.	./.	0/0:12,0:12:9.03:0,9,338	0/0:17,0:11:9.01:0,9,195	0/0:24,0:23:12.04:0,12,396	0/0:17,0:14:10.28:0,10,216	0/0:13,0:10:12.04:0,12,541	0/1:13,3:15:4.19:363,0,4	1/1:9,2:11:0.47:1,0,0	0/0:27,0:25:33.05:0,33,1013	0/0:9,0:9:3.01:0,3,158	0/0:19,0:18:12.04:0,12,629	0/0:29,0:28:14.25:0,14,834	0/0:36,0:32:34.41:0,34,1375	1/1:13,7:15:1.71:126,2,0	0/0:19,0:14:15.05:0,15,459	0/1:15,0:17:26.59:27,0,115	0/0:14,0:13:2.24:0,2,64	0/0:19,0:15:5.18:0,5,49	0/0:16,0:14:9.01:0,9,202	1/1:20,0:17:0.47:1,0,0	0/0:27,0:19:3.77:0,4,80	0/0:12,0:12:2.84:0,3,14	0/0:28,0:24:45.12:0,45,1062	0/0:15,0:14:11.44:0,11,298	0/0:9,0:3:6.02:0,6,125
chr10	87569418	.	GGAAGGGGGCT	G	962.35	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.142;DP=675;FS=3.669;HRun=0;HaplotypeScore=195.1425;InbreedingCoeff=0.9366;MQ=81.97;MQ0=0;MQRankSum=-5.415;QD=43.74;ReadPosRankSum=-0.097;VQSLOD=3.2923;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:39.13:1057,39,0	0/0:8,0:8:24.08:0,24,1242	0/0:16,0:18:51.11:0,51,2188	0/0:20,0:21:50.33:0,50,2140	0/0:17,0:17:51.14:0,51,2573	0/0:25,0:25:75.26:0,75,3537	0/0:30,0:30:87.30:0,87,3998	0/0:21,0:21:63.21:0,63,2565	0/0:21,0:21:63.22:0,63,3283	0/0:20,0:20:54.17:0,54,2351	0/0:4,0:4:12.04:0,12,530	0/0:42,0:42:99:0,123,5467	0/0:40,0:40:99:0,120,5708	0/0:44,0:44:99:0,132,6213	0/0:33,0:33:99:0,99,4907	0/0:28,0:28:84.29:0,84,4320	0/0:31,0:31:93.32:0,93,4805	0/0:28,0:28:84.27:0,84,4312	0/0:23,0:23:63.18:0,63,3047	0/0:13,0:13:36.10:0,36,1631	0/0:62,0:62:99:0,181,8831	0/0:12,0:12:36.12:0,36,1708	0/0:8,0:8:21.07:0,21,1052	0/0:44,0:44:99:0,126,6102	0/0:18,0:18:54.19:0,54,2832	0/0:23,0:23:69.24:0,69,3447	0/0:15,0:15:45.15:0,45,2297	0/0:4,0:4:12.04:0,12,580
chr10	87569565	.	T	TTGTG	838.71	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.822;DP=634;FS=9.146;HRun=0;HaplotypeScore=149.5288;InbreedingCoeff=0.7293;MQ=71.88;MQ0=7;MQRankSum=-1.223;QD=18.23;ReadPosRankSum=0.127;VQSLOD=2.8391;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,20:46:47.60:933,48,0	0/0:8,0:8:9.01:0,9,84	0/0:44,0:31:35.06:0,35,323	0/0:37,0:29:43.37:0,43,540	0/0:15,0:15:33.10:0,33,511	0/0:15,0:15:15.03:0,15,172	0/0:23,0:23:36.09:0,36,494	0/0:21,0:20:15.03:0,15,215	0/0:18,0:18:36.11:0,36,578	0/0:32,0:32:57.06:0,57,505	0/0:11,0:11:27.03:0,27,253	0/0:28,0:28:54.12:0,54,865	0/0:33,0:33:84.23:0,84,1343	0/0:24,0:24:54.12:0,54,858	0/0:27,0:27:60.20:0,60,981	0/0:33,0:34:69.23:0,69,1120	0/0:29,0:29:45.04:0,45,416	0/0:23,0:23:33.11:0,33,513	0/0:17,0:18:15.49:0,15,142	0/0:14,0:13:21.03:0,21,202	0/0:25,0:25:23.60:0,24,353	0/0:17,0:17:21.06:0,21,320	0/0:8,0:8:9.02:0,9,107	0/0:18,0:18:18.05:0,18,267	0/0:15,0:15:27.09:0,27,435	0/0:24,0:24:21.09:0,21,235	0/0:24,0:24:32.91:0,33,310	0/0:3,0:3:3.01:0,3,50
chr10	87569580	.	TGTGGGGG	T	4068.90	PASS	AB=0.969;AC=10;AF=0.179;AN=56;BaseQRankSum=5.851;DP=564;FS=12.660;HRun=0;HaplotypeScore=155.2590;InbreedingCoeff=0.7366;MQ=65.62;MQ0=8;MQRankSum=-8.014;QD=41.52;ReadPosRankSum=2.694;VQSLOD=3.0408;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:57.20:0,57,1810	1/1:0,6:6:9.03:241,9,0	0/0:44,0:28:42.22:0,42,1410	0/0:35,0:26:33.11:0,33,1567	0/0:20,0:20:54.15:0,54,1859	0/0:14,0:13:7.56:0,8,629	0/0:23,0:23:61.82:0,62,1431	0/0:16,0:15:11.63:0,12,599	0/0:22,0:22:63.18:0,63,2119	1/1:1,30:31:72.22:1794,72,0	1/1:2,10:12:27.09:723,27,0	0/0:26,0:26:75.24:0,75,2658	0/0:34,0:33:96.30:0,96,3682	0/0:23,0:23:69.22:0,69,2572	0/0:26,0:26:75.23:0,75,2676	0/0:30,0:30:90.30:0,90,3233	1/1:2,23:25:45.15:1205,45,0	0/0:21,0:21:42.34:0,42,1430	0/1:9,0:9:1.69:2,0,338	0/0:13,0:11:24.08:0,24,486	0/0:18,0:18:34.68:0,35,803	0/0:13,0:13:36.59:0,37,885	0/0:5,0:5:9.03:0,9,222	0/0:18,0:18:42.11:0,42,1002	0/0:13,0:13:33.10:0,33,1119	0/1:14,1:15:99:104,0,450	0/0:19,0:19:39.13:0,39,801	0/0:4,0:4:9.03:0,9,212
chr10	87569581	.	GT	G	2903.37	PASS	AB=0.954;AC=31;AF=0.554;AN=56;BaseQRankSum=5.562;DP=556;FS=22.942;HRun=1;HaplotypeScore=99.7443;InbreedingCoeff=0.6836;MQ=64.85;MQ0=8;MQRankSum=-5.800;QD=11.21;ReadPosRankSum=-3.503;VQSLOD=-0.0504;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:53.55:0,54,402	1/1:6,0:6:8.71:49,9,0	0/0:41,1:26:33.67:0,34,517	0/0:33,0:24:39.80:0,40,504	0/0:19,0:19:45.22:0,45,590	1/1:9,3:11:13.16:228,13,0	0/1:23,2:25:9.67:164,0,10	1/1:15,2:16:16.35:164,16,0	0/0:22,0:22:38.81:0,39,686	1/1:31,0:31:59.28:342,59,0	1/1:10,2:12:26.17:148,26,0	0/0:25,0:25:75.12:0,75,904	0/0:34,0:33:99:0,99,1238	0/0:23,0:23:69.17:0,69,879	0/0:25,1:26:64.15:0,64,884	0/0:33,0:33:82.07:0,82,1078	1/1:23,0:23:43.54:246,44,0	1/1:20,1:21:0.17:151,0,0	1/1:1,8:9:20.72:232,21,0	1/1:0,13:11:20.74:256,21,0	1/1:17,0:17:14.91:170,15,0	0/1:14,1:15:3.86:117,0,4	1/1:4,1:5:2.05:77,2,0	0/1:17,0:17:29.37:68,0,29	0/0:11,0:11:6.62:0,7,341	1/1:13,1:14:13.64:180,14,0	1/1:1,18:19:38.68:492,39,0	1/1:3,0:3:0.59:25,1,0
chr10	87570134	.	T	TGCAGCA	474	PASS	AB=1.000;AC=7;AF=0.184;AN=38;BaseQRankSum=-1.121;DP=540;FS=8.588;HRun=0;HaplotypeScore=112.2698;InbreedingCoeff=0.5977;MQ=82.40;MQ0=9;MQRankSum=-2.422;QD=9.12;ReadPosRankSum=-0.684;VQSLOD=1.4709;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:0:0,0,0	1/1:6,0:6:3.01:73,3,0	./.	./.	./.	./.	0/0:48,0:49:57.09:0,57,948	0/0:26,0:26:2.98:0,3,22	0/0:23,0:23:48.11:0,48,811	1/1:6,0:6:0.47:1,0,0	./.	0/0:38,0:39:48.15:0,48,912	0/0:24,0:24:21.07:0,21,422	0/0:33,0:34:48.13:0,48,873	0/0:32,0:33:48.11:0,48,806	0/0:31,0:31:48.15:0,48,930	1/1:13,12:29:17.99:499,18,0	0/0:23,0:23:36.08:0,36,638	./.	0/0:6,0:6:0:0,0,0	0/0:28,0:27:2.99:0,3,24	./.	0/0:1,0:1:0:0,0,0	0/0:36,0:38:63.17:0,63,1124	./.	./.	0/0:24,0:24:30.09:0,30,550	0/0:2,0:2:3.01:0,3,60
chr10	87576872	.	GA	G	2603.62	PASS	AB=0.969;AC=24;AF=0.429;AN=56;BaseQRankSum=7.376;DP=579;FS=3.026;HRun=12;HaplotypeScore=76.5973;InbreedingCoeff=0.8439;MQ=61.91;MQ0=3;MQRankSum=0.940;QD=9.27;ReadPosRankSum=4.270;VQSLOD=3.1007;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:38:63.14:182,63,0	1/1:3,0:8:12:35,12,0	0/1:14,1:6:3.57:15,0,4	0/1:12,0:7:3.64:4,0,41	0/0:14,1:17:9.39:0,9,242	1/1:4,21:25:47.80:371,48,0	1/1:4,28:32:54.22:557,54,0	0/0:6,0:17:39.03:0,39,250	0/0:23,0:23:57.11:0,57,578	1/1:3,0:25:42.87:123,43,0	1/1:3,0:19:28.28:82,28,0	0/0:25,0:24:64.93:0,65,638	0/0:7,0:7:15.01:0,15,144	0/0:17,0:17:42.08:0,42,425	0/0:25,3:28:9.19:0,9,616	0/0:29,1:30:57.88:0,58,756	1/1:1,1:28:49.84:159,50,0	1/1:1,22:23:47.81:371,48,0	0/0:10,0:19:41.24:0,41,243	0/0:11,0:24:48.80:0,49,280	0/0:5,0:11:11.49:0,11,63	1/1:1,15:16:32.84:255,33,0	1/1:2,17:19:41.80:325,42,0	1/1:4,17:21:20.36:341,20,0	0/0:20,1:23:2.53:0,3,337	0/0:5,0:22:41.95:0,42,239	0/0:9,1:21:13.97:0,14,155	0/0:5,0:12:30.76:0,31,178
chr10	87577532	.	CT	C	2597.44	PASS	AB=0.914;AC=15;AF=0.268;AN=56;BaseQRankSum=11.190;DP=734;FS=1.174;HRun=10;HaplotypeScore=76.1749;InbreedingCoeff=0.7823;MQ=83.34;MQ0=0;MQRankSum=-1.753;QD=12.80;ReadPosRankSum=1.447;VQSLOD=3.7136;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,1:43:82.16:0,82,1097	0/0:9,0:9:15.03:0,15,158	0/0:23,0:23:44.83:0,45,436	0/1:20,2:21:6.20:6,0,130	0/0:30,1:31:58.21:0,58,847	1/1:2,17:20:50.98:443,51,0	1/1:1,18:21:52.06:429,52,0	0/1:28,3:31:1.83:2,0,618	0/0:22,0:22:54.15:0,54,597	0/0:28,1:30:24.91:0,25,481	0/0:27,0:27:69.16:0,69,745	0/0:31,2:33:41.07:0,41,880	0/0:29,0:29:78.17:0,78,833	0/0:23,0:23:66.16:0,66,721	0/0:34,1:36:76.05:0,76,1050	0/0:31,1:33:67.01:0,67,935	0/0:26,2:28:14.14:0,14,602	1/1:3,19:22:53.94:462,54,0	0/1:19,2:21:7.02:7,0,365	0/0:27,0:27:66.18:0,66,730	0/0:34,0:34:78.19:0,78,848	1/1:2,24:26:68.02:579,68,0	1/1:3,10:13:23.99:208,24,0	1/1:1,26:27:74.98:651,75,0	0/0:20,0:20:48.11:0,48,517	0/0:30,1:31:78.20:0,78,856	0/0:34,0:35:89.70:0,90,939	0/0:17,0:17:48.13:0,48,531
chr10	87578562	.	G	GA	2889.54	PASS	AB=0.968;AC=14;AF=0.250;AN=56;BaseQRankSum=6.369;DP=634;FS=4.924;HRun=9;HaplotypeScore=88.7369;InbreedingCoeff=0.8221;MQ=68.38;MQ0=5;MQRankSum=1.709;QD=16.51;ReadPosRankSum=1.599;VQSLOD=3.9232;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:68.82:0,69,561	0/0:10,0:10:24.40:0,24,195	0/0:27,0:15:23.03:0,23,132	0/1:27,0:14:19.78:20,0,49	0/0:27,0:28:54.44:0,54,449	1/1:3,29:32:23.10:711,23,0	1/1:1,9:11:26.94:280,27,0	0/0:32,0:32:74.91:0,75,644	0/0:21,0:21:41.95:0,42,364	0/0:23,0:23:26.51:0,27,350	0/0:19,0:19:34.20:0,34,348	0/1:18,0:18:4.56:5,0,288	0/0:25,0:25:27.86:0,28,484	0/0:18,0:18:47.97:0,48,414	0/0:30,0:30:74.94:0,75,644	0/0:27,0:27:65.95:0,66,569	0/0:25,0:25:25.18:0,25,411	1/1:6,24:30:63.16:690,63,0	0/0:23,0:23:52.36:0,52,424	0/0:30,1:31:50.57:0,51,642	0/0:20,0:20:38.96:0,39,332	1/1:5,13:18:14.51:344,15,0	1/1:1,20:22:57.15:631,57,0	1/1:1,14:15:36.10:398,36,0	0/0:14,0:14:38.99:0,39,339	0/0:27,1:28:44.77:0,45,610	0/0:24,0:23:71.97:0,72,621	0/0:4,0:4:12:0,12,104
chr10	87578585	.	AAAAAGG	A	2661.92	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=6.222;DP=634;FS=0.000;HRun=0;HaplotypeScore=147.0180;InbreedingCoeff=0.4659;MQ=65.10;MQ0=7;MQRankSum=-4.652;QD=11.78;ReadPosRankSum=-3.407;VQSLOD=1.8855;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,20:27:33.04:624,33,0	1/1:1,10:11:23.83:330,24,0	0/0:41,0:20:18.76:0,19,384	0/1:32,0:13:30.88:31,0,170	0/0:26,0:26:66.60:0,67,1583	0/1:24,0:24:18.84:19,0,870	0/1:14,0:14:73.84:74,0,326	0/0:26,0:26:60.08:0,60,1163	0/0:18,0:18:45.13:0,45,1260	1/1:1,16:17:48.12:891,48,0	1/1:6,15:21:38.78:425,39,0	0/0:10,0:10:24.08:0,24,658	0/0:25,0:25:63.13:0,63,1481	0/0:15,0:15:39.11:0,39,1093	0/0:28,0:28:66.16:0,66,1749	0/0:27,0:27:72.18:0,72,1764	1/1:8,17:25:18.06:344,18,0	0/0:32,0:32:10.20:0,10,989	0/0:29,0:29:69.08:0,69,1285	0/0:31,0:31:75.17:0,75,1797	0/0:17,0:17:42.09:0,42,1047	0/1:18,0:18:63.36:63,0,478	0/1:23,0:23:33.47:33,0,610	0/1:14,0:14:16.76:17,0,509	0/0:17,0:17:48.02:0,48,951	0/0:30,1:31:15.16:0,15,1833	0/0:27,0:26:78.19:0,78,2030	0/0:8,0:8:24.06:0,24,603
chr10	87580425	.	A	AACTGTTTGTCTCCTGTTACTCAGGAGG	58982.86	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=7.383;DP=734;FS=1.667;HRun=0;HaplotypeScore=460.4877;InbreedingCoeff=0.9260;MQ=80.51;MQ0=0;MQRankSum=-19.885;QD=193.39;ReadPosRankSum=-0.382;VQSLOD=4.1361;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,7:41:87.30:8706,87,0	1/1:11,2:15:39.13:2790,39,0	0/0:25,0:25:75.23:0,75,3773	0/0:23,0:23:63.22:0,63,3016	0/0:22,0:22:63.21:0,63,3937	1/1:16,4:23:57.19:5740,57,0	1/1:27,0:27:75.24:5303,75,0	0/0:34,0:34:90.30:0,90,5005	0/0:24,0:24:69.22:0,69,3955	1/1:25,5:34:99:8487,99,0	1/1:18,6:25:63.21:4971,63,0	0/0:34,0:34:99:0,99,6331	0/0:28,0:28:72.23:0,72,4565	0/0:32,0:32:84.29:0,84,5272	0/0:46,0:46:99:0,138,8815	0/0:37,0:37:99:0,108,6772	1/1:18,6:27:66.23:5728,66,0	1/1:9,3:14:36.12:3542,36,0	0/0:21,0:21:54.18:0,54,2474	0/0:28,0:28:78.26:0,78,4693	0/0:27,0:27:72.23:0,72,4215	1/1:23,4:28:63.22:5807,63,0	1/1:22,1:25:66.22:4788,66,0	1/1:16,2:23:36.12:2802,36,0	0/0:14,0:14:42.12:0,42,2447	0/1:23,0:23:99:319,0,3791	0/0:23,0:23:63.20:0,63,4273	0/0:11,0:11:27.09:0,27,1959
chr10	87583054	.	A	AG	227.13	PASS	AB=0.594;AC=1;AF=0.018;AN=56;BaseQRankSum=4.339;DP=674;FS=15.960;HRun=0;HaplotypeScore=64.2784;InbreedingCoeff=-0.0193;MQ=69.97;MQ0=1;MQRankSum=-4.786;QD=11.95;ReadPosRankSum=-0.300;VQSLOD=2.8908;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,13:19:99:302,0,209	0/0:13,0:13:39.13:0,39,543	0/0:17,0:17:51.16:0,51,696	0/0:19,0:18:51.15:0,51,665	0/0:21,0:21:60.20:0,60,838	0/0:24,0:24:72.22:0,72,988	0/0:17,0:17:51.17:0,51,713	0/0:43,0:43:99:0,126,1715	0/0:19,0:19:57.19:0,57,797	0/0:40,0:40:99:0,117,1617	0/0:20,0:20:60.19:0,60,821	0/0:27,0:27:81.27:0,81,1133	0/0:32,0:32:96.32:0,96,1341	0/0:22,0:22:66.22:0,66,923	0/0:33,0:33:93.31:0,93,1300	0/0:41,0:41:99:0,123,1719	0/0:33,0:32:99:0,99,1360	0/0:17,0:17:51.17:0,51,709	0/0:26,0:26:66.18:0,66,881	0/0:22,0:22:63.20:0,63,864	0/0:18,0:18:51.17:0,51,713	0/0:16,0:16:45.15:0,45,629	0/0:19,0:19:57.19:0,57,796	0/0:22,0:22:66.21:0,66,904	0/0:14,0:14:42.13:0,42,571	0/0:29,0:29:87.29:0,87,1217	0/0:42,0:42:99:0,126,1760	0/0:9,0:8:12.04:0,12,168
chr10	87583605	.	AGTGTGTGT	A	570.34	PASS	AB=0.955;AC=19;AF=0.452;AN=42;BaseQRankSum=4.834;DP=496;FS=11.382;HRun=0;HaplotypeScore=120.2941;InbreedingCoeff=0.4109;MQ=57.73;MQ0=27;MQRankSum=-3.230;QD=2.81;ReadPosRankSum=-0.782;VQSLOD=1.3886;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,1:18:3.01:74,3,0	./.	./.	./.	0/0:12,0:11:3.01:0,3,67	./.	1/1:19,4:18:3.48:75,3,0	./.	0/0:12,0:12:9.02:0,9,252	0/1:32,0:31:0.90:1,0,2	1/1:12,0:11:2.97:21,3,0	0/0:23,0:19:30.10:0,30,936	0/0:17,0:17:21.07:0,21,619	0/0:17,0:16:21.07:0,21,738	0/0:23,0:22:18.06:0,18,450	0/0:31,0:31:45.15:0,45,1438	0/1:21,0:19:99:103,0,197	1/1:11,6:17:3:74,3,0	1/1:18,1:19:3.01:74,3,0	1/1:9,2:11:2.85:73,3,0	./.	0/1:16,2:19:32.78:121,0,33	1/1:16,1:17:3.01:74,3,0	./.	0/0:17,0:16:21.04:0,21,549	0/0:20,0:20:9.03:0,9,162	1/1:14,0:14:2.94:18,3,0	0/0:2,0:3:2.99:0,3,24
chr10	87583651	.	TGTGTGTGTGG	T	795.28	PASS	AB=0.986;AC=10;AF=0.179;AN=56;BaseQRankSum=5.256;DP=426;FS=4.098;HRun=0;HaplotypeScore=117.5138;InbreedingCoeff=0.4765;MQ=56.09;MQ0=28;MQRankSum=-1.245;QD=10.46;ReadPosRankSum=2.117;VQSLOD=2.2785;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:34.89:0,35,378	1/1:2,0:2:3:25,3,0	0/0:28,0:15:37.97:0,38,344	0/0:27,0:15:34.76:0,35,335	0/0:9,0:9:17.96:0,18,378	0/0:7,0:6:14.94:0,15,131	0/0:23,0:20:23.50:0,23,354	0/0:12,0:9:21.58:0,22,185	0/0:11,0:10:27.04:0,27,605	1/1:4,14:15:32.22:321,32,0	1/1:10,0:10:23.95:213,24,0	0/0:18,0:16:42.09:0,42,1321	0/0:14,0:14:36.09:0,36,1040	0/0:19,0:17:44.75:0,45,1179	0/0:18,0:18:36.08:0,36,938	0/0:26,0:25:69.16:0,69,2182	0/1:15,1:15:99:307,0,215	0/0:20,0:20:25:0,25,242	0/1:7,0:7:7.12:7,0,109	0/0:10,0:10:5.62:0,6,147	0/0:12,0:11:21.83:0,22,171	0/1:11,0:11:67.81:68,0,119	0/1:11,0:11:1.37:1,0,83	0/0:21,0:19:41.92:0,42,357	0/0:18,0:16:47.99:0,48,1059	0/0:15,0:13:35.82:0,36,398	0/0:13,0:12:31.26:0,31,242	0/0:6,0:6:11.83:0,12,223
chr10	87583768	.	T	TG	1675.79	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.174;DP=702;FS=0.596;HRun=2;HaplotypeScore=72.9405;InbreedingCoeff=0.9988;MQ=94.79;MQ0=0;MQRankSum=-4.996;QD=37.24;ReadPosRankSum=1.111;VQSLOD=4.2413;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,42:45:99:1771,123,0	0/0:11,0:11:33.10:0,33,406	0/0:28,0:28:81.06:0,81,948	0/0:38,0:38:99:0,108,1252	0/0:15,0:15:42.12:0,42,508	0/0:20,0:20:57.18:0,57,707	0/0:34,0:34:99:0,99,1172	0/0:24,0:24:60.17:0,60,732	0/0:19,0:19:54.17:0,54,667	0/0:24,0:24:66.18:0,66,809	0/0:19,0:19:54.17:0,54,669	0/0:28,0:28:78.08:0,78,928	0/0:30,0:30:90.27:0,90,1103	0/0:29,0:29:84.26:0,84,1040	0/0:38,0:38:99:0,111,1348	0/0:30,0:30:87.26:0,87,1067	0/0:29,0:28:84.24:0,84,1026	0/0:23,0:23:63.20:0,63,781	0/0:15,0:15:39.12:0,39,484	0/0:17,0:17:45.13:0,45,545	0/0:51,0:51:99:0,147,1807	0/0:15,0:15:42.11:0,42,498	0/0:15,0:15:42.13:0,42,521	0/0:42,0:42:99:0,126,1548	0/0:16,0:16:48.15:0,48,595	0/0:24,0:24:69.21:0,69,845	0/0:11,0:11:33.09:0,33,396	0/0:12,0:12:30.09:0,30,371
chr10	87584342	.	CT	C	1305.50	PASS	AB=0.748;AC=21;AF=0.375;AN=56;BaseQRankSum=2.413;DP=393;FS=12.866;HRun=12;HaplotypeScore=59.1785;InbreedingCoeff=0.6444;MQ=63.54;MQ0=11;MQRankSum=0.771;QD=9.00;ReadPosRankSum=2.926;VQSLOD=1.1029;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,15:18:20.83:162,21,0	0/1:2,5:7:15.50:78,0,15	0/0:36,0:10:12.92:0,13,102	0/0:44,1:11:3.27:0,3,24	0/0:7,0:6:12.01:0,12,111	1/1:3,4:8:13.95:114,14,0	1/1:5,3:8:11.94:93,12,0	0/0:21,1:21:17.42:0,17,335	0/0:5,0:5:12.01:0,12,115	1/1:2,9:11:23.88:186,24,0	1/1:8,5:13:23.83:183,24,0	0/0:17,1:18:33.52:0,34,326	0/0:7,0:7:6:0,6,54	0/0:10,0:10:14.77:0,15,124	0/0:11,0:11:7.75:0,8,100	0/0:15,0:15:4.82:0,5,193	0/1:19,12:31:20.84:288,0,21	1/1:7,6:13:20.90:162,21,0	0/0:17,1:18:12.75:0,13,294	0/0:8,0:7:18.03:0,18,181	0/0:11,0:11:26.61:0,27,232	1/1:1,4:5:8.95:70,9,0	1/1:1,3:4:8.96:70,9,0	1/1:2,6:8:11.95:93,12,0	0/1:15,1:16:5.21:5,0,128	0/0:16,1:17:11.79:0,12,269	0/0:14,0:14:18.04:0,18,183	0/0:1,0:1:3.01:0,3,30
chr10	87584387	.	TTTTTC	T	204.31	PASS	AB=0.944;AC=12;AF=0.214;AN=56;BaseQRankSum=1.401;DP=384;FS=18.667;HRun=0;HaplotypeScore=55.2222;InbreedingCoeff=0.5616;MQ=38.54;MQ0=41;MQRankSum=-3.116;QD=2.20;ReadPosRankSum=2.905;VQSLOD=-0.0586;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:19:41.97:0,42,722	0/0:4,0:4:9.03:0,9,168	1/1:54,0:3:1.78:5,2,0	0/0:61,0:2:3.01:0,3,56	0/0:8,0:7:17.92:0,18,268	0/1:11,0:10:10.19:61,0,10	1/1:3,3:5:5.83:103,6,0	0/0:21,0:19:41.49:0,41,573	0/0:2,0:2:5.97:0,6,81	0/0:16,0:14:38.97:0,39,519	0/0:19,0:19:40.82:0,41,663	0/0:9,0:8:15.96:0,16,244	0/0:4,0:3:9.02:0,9,123	0/0:13,0:8:20.77:0,21,295	0/0:8,0:8:14.97:0,15,224	0/0:6,0:5:12.03:0,12,185	0/0:24,0:23:45.01:0,45,743	1/1:6,1:7:11.51:105,12,0	0/0:11,0:9:25.72:0,26,351	0/0:6,0:4:12.04:0,12,210	0/0:8,0:7:18.47:0,18,246	1/1:3,0:2:2.98:22,3,0	1/1:3,0:3:5.21:34,5,0	0/1:7,1:7:13.99:21,0,14	0/0:11,0:11:23.07:0,23,197	0/0:16,0:15:42.54:0,43,708	0/0:9,0:9:23.33:0,23,404	0/0:12,0:7:18.42:0,18,214
chr10	87584388	.	TTTTC	T	177.59	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=2.436;DP=365;FS=19.041;HRun=0;HaplotypeScore=47.5630;InbreedingCoeff=0.7278;MQ=38.24;MQ0=37;MQRankSum=-3.269;QD=2.11;ReadPosRankSum=3.052;VQSLOD=0.0660;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:19:44.89:0,45,629	0/0:4,0:4:9:0,9,133	1/1:53,0:3:1.79:5,2,0	0/0:58,0:2:3.01:0,3,50	0/0:9,0:8:14.90:0,15,194	1/1:2,6:7:6.02:80,6,0	1/1:5,0:4:6.02:70,6,0	0/0:21,0:20:42.85:0,43,433	0/0:2,0:2:5.97:0,6,72	0/0:15,0:13:38.76:0,39,420	0/0:19,0:19:45.04:0,45,518	0/0:7,0:6:14.66:0,15,171	0/0:4,0:3:9.01:0,9,94	0/0:13,0:8:19.92:0,20,247	0/0:7,0:7:11.98:0,12,165	0/0:6,0:5:12.02:0,12,144	0/0:24,0:23:38.92:0,39,540	1/1:5,0:5:11.70:89,12,0	0/0:9,0:8:20.73:0,21,280	0/0:8,0:6:17.92:0,18,212	0/0:8,0:7:18.46:0,18,188	1/1:3,0:2:3.01:46,3,0	1/1:3,0:3:4.68:18,5,0	1/1:6,0:5:4.80:24,5,0	0/0:7,0:7:10.50:0,10,69	0/0:15,0:14:39.04:0,39,561	0/0:9,0:9:23.31:0,23,324	0/0:12,0:7:15.46:0,15,175
chr10	87584464	.	ACCCCC	A	1541.10	PASS	AC=16;AF=0.333;AN=48;BaseQRankSum=1.359;DP=269;FS=4.463;HRun=11;HaplotypeScore=40.0766;InbreedingCoeff=0.6389;MQ=48.86;MQ0=53;MQRankSum=-3.920;QD=19.76;ReadPosRankSum=1.948;VQSLOD=-0.5970;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:11:15.05:0,15,298	1/1:4,1:8:14.78:167,15,0	0/0:40,0:1:3:0,3,29	0/0:43,0:9:13.88:0,14,176	0/0:8,0:6:6.02:0,6,175	1/1:6,4:10:15.01:217,15,0	1/1:6,1:6:10.84:143,11,0	0/0:16,0:11:8.15:0,8,225	./.	1/1:3,5:10:27.09:430,27,0	1/1:1,1:4:2.42:38,2,0	./.	0/0:4,0:4:6.02:0,6,175	0/0:11,0:8:12.04:0,12,299	0/0:7,0:6:6.02:0,6,139	0/0:5,0:6:9.03:0,9,251	1/1:7,2:18:33.08:486,33,0	1/1:6,3:6:12.03:170,12,0	0/0:7,0:4:6.02:0,6,136	0/0:5,0:3:6.02:0,6,149	./.	./.	1/1:5,1:4:3.01:54,3,0	0/0:4,2:5:0:0,0,0	0/0:2,0:2:3.01:0,3,85	0/0:5,0:6:3.01:0,3,74	0/0:3,0:4:5.99:0,6,95	0/0:4,0:3:3.01:0,3,84
chr10	87585479	.	TG	T	2428.19	PASS	AB=0.926;AC=9;AF=0.161;AN=56;BaseQRankSum=10.541;DP=616;FS=3.736;HRun=1;HaplotypeScore=71.0872;InbreedingCoeff=0.8813;MQ=85.70;MQ0=1;MQRankSum=-3.754;QD=27.28;ReadPosRankSum=2.469;VQSLOD=3.6422;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.25:0,72,1145	1/1:0,8:8:24.08:336,24,0	0/0:25,0:24:66.21:0,66,1030	0/0:16,0:16:41.80:0,42,603	0/0:20,0:20:60.20:0,60,954	0/0:12,0:12:36.11:0,36,552	0/0:18,0:18:54.18:0,54,863	0/0:38,0:38:99:0,111,1750	0/0:23,0:23:69.24:0,69,1100	1/1:2,18:20:60.19:823,60,0	1/1:0,24:24:69.14:921,69,0	0/0:23,0:23:69.22:0,69,1078	0/0:21,0:21:63.21:0,63,1007	0/0:24,0:24:72.25:0,72,1151	0/0:41,0:41:99:0,123,1944	0/0:29,0:29:87.30:0,87,1377	1/1:0,12:12:36.12:504,36,0	0/0:12,0:12:30.10:0,30,479	0/0:13,0:13:39.08:0,39,575	0/0:27,0:27:81.28:0,81,1292	0/0:33,0:33:99:0,99,1571	0/0:14,0:14:42.14:0,42,671	0/0:21,0:21:63.21:0,63,1007	0/0:20,0:20:54.18:0,54,863	0/0:27,0:27:81.28:0,81,1295	0/1:23,2:25:8.70:9,0,1027	0/0:30,0:30:90.31:0,90,1435	0/0:16,0:16:48.16:0,48,767
chr10	87586498	.	G	GT	1982.25	PASS	AB=0.838;AC=10;AF=0.179;AN=56;BaseQRankSum=-9.156;DP=594;FS=2.005;HRun=10;HaplotypeScore=59.5082;InbreedingCoeff=0.4847;MQ=75.75;MQ0=0;MQRankSum=-1.018;QD=15.61;ReadPosRankSum=-1.670;VQSLOD=3.5377;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:80.88:0,81,665	0/1:2,8:10:6.57:142,0,7	0/1:13,0:13:26.82:27,0,52	0/0:10,0:11:13.98:0,14,139	0/0:22,0:22:40.27:0,40,487	0/0:23,0:23:47.89:0,48,394	0/0:25,0:25:65.92:0,66,542	0/0:25,0:26:58.93:0,59,474	0/0:24,0:24:59.87:0,60,489	1/1:3,29:32:78.16:820,78,0	1/1:3,16:20:29.28:488,29,0	0/0:24,2:28:44.21:0,44,546	0/0:18,1:20:8.98:0,9,269	0/0:16,0:16:38.94:0,39,320	0/0:28,3:32:3.96:0,4,432	0/0:18,0:18:41.93:0,42,343	1/1:2,24:26:60.15:640,60,0	0/0:10,0:10:23.95:0,24,197	0/0:16,1:17:3.94:0,4,236	0/0:21,2:23:12.90:0,13,307	0/0:17,1:18:6.92:0,7,260	0/0:15,0:15:38.93:0,39,316	0/0:16,0:16:35.95:0,36,296	0/0:22,1:23:27.92:0,28,436	0/1:15,2:17:19.03:19,0,275	0/0:32,1:33:48.89:0,49,608	0/0:35,1:36:60.85:0,61,701	0/1:8,1:9:5.01:5,0,170
chr10	87586636	.	G	GATTT	7394.39	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-10.080;DP=460;FS=0.435;HRun=0;HaplotypeScore=68.8787;InbreedingCoeff=0.9554;MQ=60.73;MQ0=0;MQRankSum=-0.170;QD=49.96;ReadPosRankSum=0.832;VQSLOD=5.3018;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,20:27:60.21:1522,60,0	1/1:1,5:6:12.04:305,12,0	0/0:10,0:10:21.07:0,21,357	0/0:9,0:8:12.04:0,12,208	0/0:26,0:26:66.19:0,66,1088	1/1:4,8:13:18.06:457,18,0	1/1:2,7:9:21.07:533,21,0	0/0:30,0:30:66.23:0,66,1142	0/0:15,0:15:39.13:0,39,678	1/1:3,14:17:45.14:1092,45,0	1/1:3,14:18:35.99:745,36,0	0/0:25,0:25:72.22:0,72,1196	0/0:18,0:18:39.13:0,39,673	0/0:9,0:9:18.06:0,18,313	0/0:17,0:17:33.10:0,33,546	0/0:18,0:18:42.12:0,42,677	1/1:3,17:21:45.15:1143,45,0	1/1:3,11:14:33.11:838,33,0	0/0:18,0:18:33.09:0,33,541	0/0:25,0:25:66.23:0,66,1133	0/0:11,0:11:27.09:0,27,469	1/1:3,2:5:6.02:152,6,0	1/1:5,6:11:18.06:456,18,0	1/1:2,2:6:6.02:152,6,0	0/0:16,0:15:30.10:0,30,516	0/0:24,0:24:63.22:0,63,1093	0/0:32,0:32:90.27:0,90,1507	0/0:9,0:9:21.07:0,21,365
chr10	87587154	.	T	TA	1733.38	PASS	AB=0.832;AC=25;AF=0.446;AN=56;BaseQRankSum=-3.997;DP=447;FS=1.663;HRun=13;HaplotypeScore=54.9357;InbreedingCoeff=0.3611;MQ=75.28;MQ0=4;MQRankSum=0.351;QD=6.10;ReadPosRankSum=1.464;VQSLOD=1.9794;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:34.68:0,35,289	1/1:2,6:8:15.02:139,15,0	0/0:36,0:18:5.72:0,6,77	0/1:22,0:13:1.32:1,0,6	0/0:24,1:25:47.21:0,47,317	1/1:1,12:14:20.86:182,21,0	1/1:0,10:10:14.89:126,15,0	0/1:41,1:42:11.78:12,0,316	0/0:6,0:6:14.40:0,14,91	1/1:10,8:18:0.45:147,0,0	1/1:6,12:20:28.96:276,29,0	0/0:9,0:9:17.78:0,18,119	0/1:7,1:8:7.49:7,0,86	0/0:7,0:8:13.87:0,14,86	0/0:6,0:8:7.94:0,8,45	0/0:10,0:11:21.87:0,22,132	0/1:8,19:27:6.54:364,0,7	1/1:3,19:25:42.45:351,42,0	0/1:19,2:20:0.49:0,0,253	0/0:10,0:10:12.71:0,13,86	0/0:5,0:5:14.86:0,15,101	0/1:1,3:4:11.57:47,0,12	1/1:3,8:11:15.02:140,15,0	1/1:1,3:4:6.01:56,6,0	0/1:11,4:14:50.80:51,0,131	0/1:19,4:24:13.01:13,0,208	0/0:19,1:21:9.81:0,10,201	0/1:8,1:9:7.03:7,0,101
chr10	87587634	.	C	CT	860.27	PASS	AB=0.908;AC=20;AF=0.357;AN=56;BaseQRankSum=8.640;DP=530;FS=12.928;HRun=11;HaplotypeScore=86.7286;InbreedingCoeff=0.5593;MQ=71.66;MQ0=2;MQRankSum=-3.716;QD=4.37;ReadPosRankSum=-3.634;VQSLOD=-0.4984;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:27,2:29:55.73:56,0,63	1/1:0,5:5:5.96:49,6,0	0/0:24,0:15:6.28:0,6,40	0/0:23,0:12:0.18:0,0,70	0/0:20,0:21:50.73:0,51,375	0/1:23,0:22:20.06:71,0,20	1/1:16,2:18:15.91:106,16,0	0/0:34,0:34:20.10:0,20,381	0/0:11,0:12:25.89:0,26,187	1/1:20,1:20:14.58:208,15,0	1/1:3,13:16:24.36:176,24,0	0/0:20,1:21:14.29:0,14,288	0/0:25,0:26:61.23:0,61,456	0/0:15,0:15:37.41:0,37,282	0/0:19,0:19:36.23:0,36,297	0/0:18,0:19:46.86:0,47,354	1/1:7,15:23:6.82:192,7,0	1/1:15,1:15:9.36:45,9,0	0/0:20,0:22:51.53:0,52,371	0/0:32,0:32:67.71:0,68,513	0/1:6,3:9:18.49:18,0,58	1/1:8,0:8:5.29:39,5,0	0/1:17,1:13:30.62:31,0,34	1/1:10,0:10:9.05:60,9,0	0/0:12,0:12:29.86:0,30,232	0/0:21,0:21:56.76:0,57,441	0/0:23,0:24:49.76:0,50,375	0/0:6,0:6:11.17:0,11,76
chr10	87587653	.	TC	T	1283.92	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=10.498;DP=517;FS=4.352;HRun=1;HaplotypeScore=70.1347;InbreedingCoeff=0.7844;MQ=56.26;MQ0=4;MQRankSum=-5.558;QD=10.97;ReadPosRankSum=-4.242;VQSLOD=0.0566;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:43.85:44,0,99	0/1:4,0:4:2.31:2,0,10	0/0:25,0:7:17.49:0,17,167	0/0:32,0:11:11.11:0,11,135	0/0:17,0:17:47.88:0,48,565	1/1:10,8:17:43.40:463,43,0	1/1:12,6:18:31.49:275,31,0	0/0:31,0:31:47.11:0,47,894	0/0:11,0:11:33.09:0,33,411	0/0:24,0:23:36.14:0,36,471	0/0:12,0:11:1.02:0,1,135	0/0:24,0:24:64.76:0,65,823	0/0:25,0:25:75.16:0,75,898	0/0:13,0:13:38.80:0,39,404	0/0:15,0:15:45.06:0,45,535	0/0:21,0:21:59.95:0,60,687	0/0:24,0:24:21.90:0,22,307	1/1:13,3:14:14.12:176,14,0	0/0:27,0:26:60.84:0,61,775	0/0:29,0:29:65.82:0,66,850	0/0:5,0:5:15.05:0,15,198	1/1:4,0:4:11.96:98,12,0	1/1:12,4:12:28.70:234,29,0	1/1:7,3:10:20.01:178,20,0	0/0:11,0:11:32.88:0,33,387	0/0:24,0:23:62.95:0,63,718	0/0:24,0:24:56.52:0,57,736	0/0:6,0:6:18.02:0,18,218
chr10	87588409	.	C	CTT	783.49	PASS	AB=0.820;AC=14;AF=0.250;AN=56;BaseQRankSum=0.503;DP=643;FS=0.598;HRun=14;HaplotypeScore=93.1343;InbreedingCoeff=0.5992;MQ=67.84;MQ0=3;MQRankSum=0.353;QD=5.22;ReadPosRankSum=-0.035;VQSLOD=0.1462;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:27:7.80:33,0,8	0/0:10,0:10:17.55:0,18,136	0/0:23,0:10:5.86:0,6,81	0/0:29,0:14:15.05:0,15,95	0/0:28,0:34:16.68:0,17,211	1/1:5,12:19:13.77:135,14,0	1/1:2,11:15:16.78:174,17,0	0/0:24,0:24:23.27:0,23,183	0/0:22,0:25:37.72:0,38,285	0/0:31,0:31:43.76:0,44,336	0/0:29,0:33:22.97:0,23,323	0/0:24,0:24:31.67:0,32,255	0/0:18,0:18:26.44:0,26,253	0/0:22,0:23:26.61:0,27,187	0/0:28,0:29:47.21:0,47,386	0/0:22,0:27:49.89:0,50,386	0/0:34,0:36:44.13:0,44,394	1/1:6,19:27:13.58:124,14,0	0/0:17,0:19:19.78:0,20,129	0/0:34,0:35:50.48:0,50,382	0/1:11,0:11:25.01:25,0,82	1/1:4,9:13:18:212,18,0	1/1:6,14:20:15.61:181,16,0	0/1:4,4:8:15.85:70,0,16	0/0:15,0:17:21.07:0,21,140	0/0:20,0:22:12.35:0,12,130	0/0:29,0:31:61.60:0,62,480	0/1:10,0:10:11.50:12,0,61
chr10	87589380	.	G	GTTT	877.08	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=6.761;DP=602;FS=0.691;HRun=4;HaplotypeScore=107.8690;InbreedingCoeff=0.5709;MQ=65.65;MQ0=6;MQRankSum=0.141;QD=25.06;ReadPosRankSum=-2.743;VQSLOD=-0.2537;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,13:24:57.82:955,58,0	0/1:10,0:10:27.46:27,0,126	0/0:32,0:11:2.89:0,3,118	0/0:42,0:27:46.87:0,47,735	0/0:31,0:31:78.25:0,78,1171	0/0:23,0:22:63.21:0,63,957	0/0:15,0:15:45.12:0,45,643	0/0:30,0:29:72.22:0,72,1069	0/0:23,0:23:63.17:0,63,895	0/0:23,0:24:28.11:0,28,424	0/0:27,0:27:39.52:0,40,492	0/0:21,0:21:63.21:0,63,959	0/0:19,0:19:51.17:0,51,771	0/0:10,0:10:26.98:0,27,384	0/0:16,0:16:39.13:0,39,595	0/0:26,0:26:75.24:0,75,1122	0/0:28,0:28:20.07:0,20,467	0/0:18,0:19:42.89:0,43,598	0/0:16,0:16:45.14:0,45,664	0/0:17,0:17:51.17:0,51,779	0/0:14,0:14:42.12:0,42,614	0/0:12,0:12:36.10:0,36,524	0/0:14,0:13:36.10:0,36,522	0/0:25,0:25:75.23:0,75,1122	0/0:15,0:13:39.08:0,39,524	0/0:22,0:22:66.19:0,66,979	0/0:31,0:31:90.22:0,90,1299	0/0:15,0:15:33.02:0,33,433
chr10	87589558	.	G	GT	675.41	PASS	AB=0.819;AC=13;AF=0.232;AN=56;BaseQRankSum=-4.960;DP=490;FS=3.343;HRun=13;HaplotypeScore=46.6577;InbreedingCoeff=0.4756;MQ=63.38;MQ0=19;MQRankSum=1.524;QD=4.89;ReadPosRankSum=2.273;VQSLOD=1.2043;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:19:35.39:0,35,237	0/0:2,0:2:2.98:0,3,21	0/1:36,0:7:13.14:13,0,21	0/1:24,0:11:28.54:34,0,29	0/0:26,0:25:59.44:0,59,409	1/1:6,14:18:18.43:293,18,0	1/1:2,3:3:6.01:56,6,0	0/0:45,0:46:67.24:0,67,521	0/0:13,0:13:29.72:0,30,205	0/0:15,0:15:34.73:0,35,232	0/0:18,0:18:16.84:0,17,260	0/0:15,0:17:33.79:0,34,217	0/0:14,0:13:29.74:0,30,206	0/0:12,0:12:20.74:0,21,141	0/0:13,0:13:29.68:0,30,202	0/0:13,0:14:25.81:0,26,170	0/0:35,0:31:71.21:0,71,473	1/1:5,11:15:25.27:225,25,0	0/0:29,1:27:16.54:0,17,252	0/0:11,0:11:26.71:0,27,184	0/0:3,0:2:2.96:0,3,21	1/1:3,3:6:11.91:99,12,0	0/1:5,5:8:11.52:47,0,12	0/1:1,4:5:7.30:72,0,7	0/1:12,2:14:1.12:1,0,137	0/0:21,0:21:53.52:0,54,370	0/0:24,0:24:44.49:0,44,306	0/0:10,0:10:20.73:0,21,139
chr10	87589766	.	TGCGCGCGCGC	T	643.14	PASS	AB=0.781;AC=13;AF=0.241;AN=54;BaseQRankSum=5.925;DP=340;FS=4.455;HRun=0;HaplotypeScore=99.2789;InbreedingCoeff=0.3933;MQ=59.42;MQ0=8;MQRankSum=-1.376;QD=5.95;ReadPosRankSum=2.346;VQSLOD=1.3726;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:11:26.36:0,26,241	0/1:2,0:3:39.95:40,0,74	0/0:11,0:6:2.26:0,2,24	0/1:12,0:5:5.06:13,0,5	0/0:11,0:11:24.04:0,24,851	1/1:0,14:14:6.02:188,6,0	1/1:1,6:7:3.01:91,3,0	0/0:24,0:22:42.12:0,42,907	0/0:10,0:9:17.61:0,18,732	0/0:2,0:8:3.71:0,4,108	0/1:6,0:8:9.05:9,0,193	0/0:13,0:12:30.09:0,30,1017	0/0:7,0:7:15.94:0,16,557	0/0:13,0:13:33.09:0,33,1264	0/0:11,0:11:15.05:0,15,534	0/0:4,0:4:12.04:0,12,444	0/1:25,0:30:99:168,0,597	1/1:3,11:10:6.02:180,6,0	0/0:12,0:17:44.99:0,45,797	0/0:5,0:9:14.99:0,15,412	0/0:14,0:30:24.08:0,24,838	./.	1/1:3,2:4:3.01:97,3,0	0/1:1,12:12:0:0,0,0	0/0:15,0:15:45.07:0,45,1674	0/0:12,0:12:33.10:0,33,836	0/0:11,0:11:27.09:0,27,732	0/0:5,0:3:9.03:0,9,353
chr10	87593907	.	T	TTGTG	1306.04	PASS	AB=0.751;AC=25;AF=0.481;AN=52;BaseQRankSum=5.533;DP=642;FS=13.205;HRun=0;HaplotypeScore=138.5598;InbreedingCoeff=0.5270;MQ=60.08;MQ0=8;MQRankSum=1.277;QD=3.82;ReadPosRankSum=-1.743;VQSLOD=1.5331;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:3.01:46,3,0	0/0:11,0:11:9.03:0,9,129	./.	./.	0/0:28,0:30:23.75:0,24,461	1/1:9,1:24:9.03:154,9,0	1/1:25,0:25:21.06:315,21,0	1/1:30,0:31:14.47:103,14,0	0/0:24,0:25:36.08:0,36,478	0/1:26,0:27:3.68:4,0,223	0/0:13,0:14:15.04:0,15,209	0/0:27,0:30:57.14:0,57,772	0/0:16,0:18:24.06:0,24,337	0/0:21,0:23:30.07:0,30,424	0/0:35,0:36:48.02:0,48,663	0/0:28,0:29:23.34:0,23,626	0/0:29,0:30:44.50:0,44,626	1/1:11,0:11:6.63:72,7,0	1/1:16,0:21:16.78:88,17,0	0/1:13,0:23:30.62:44,0,31	0/1:9,0:21:43.60:44,0,58	0/1:8,1:22:15.91:144,0,16	1/1:22,0:21:3.01:54,3,0	1/1:15,0:15:6.02:102,6,0	0/0:14,0:16:33.08:0,33,447	0/1:22,0:29:55.45:87,0,55	1/1:19,0:30:20.58:142,21,0	1/1:5,0:9:13.84:97,14,0
chr10	87594941	.	TA	T	771.16	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.450;DP=559;FS=5.173;HRun=1;HaplotypeScore=56.5122;InbreedingCoeff=0.9519;MQ=72.33;MQ0=0;MQRankSum=-2.161;QD=29.66;ReadPosRankSum=1.350;VQSLOD=3.2646;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:63.21:866,63,0	0/0:7,0:7:21.05:0,21,251	0/0:15,1:14:18.07:0,18,211	0/0:10,0:10:14.86:0,15,162	0/0:41,0:41:99:0,123,1398	0/0:23,0:23:69.10:0,69,781	0/0:14,0:14:42.07:0,42,471	0/0:32,0:32:88.70:0,89,985	0/0:20,0:20:60.06:0,60,689	0/0:32,0:32:96.27:0,96,1167	0/0:32,0:32:96.26:0,96,1156	0/0:13,0:13:39.11:0,39,476	0/0:15,0:15:43:0,43,513	0/0:15,0:15:45.11:0,45,523	0/0:20,0:20:58.04:0,58,694	0/0:21,0:21:63.18:0,63,767	0/0:19,0:19:56.98:0,57,606	0/0:24,0:24:69.09:0,69,805	0/0:26,0:26:71.94:0,72,862	0/0:31,0:31:87.19:0,87,1033	0/0:7,0:7:21.07:0,21,264	0/0:16,0:16:48.15:0,48,601	0/0:20,0:20:57.06:0,57,667	0/0:5,0:5:15.05:0,15,189	0/0:24,0:24:72.17:0,72,854	0/0:20,0:20:60.16:0,60,717	0/0:22,0:22:41.04:0,41,620	0/0:8,0:8:24.03:0,24,261
chr10	87594942	.	AT	A	213.39	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.388;DP=558;FS=1.689;HRun=12;HaplotypeScore=58.7738;InbreedingCoeff=0.9349;MQ=72.30;MQ0=0;MQRankSum=-1.609;QD=8.21;ReadPosRankSum=1.945;VQSLOD=2.4706;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:59.85:308,60,0	0/0:7,0:7:18.04:0,18,183	0/0:17,0:14:26.56:0,27,215	0/0:10,0:10:14:0,14,87	0/0:39,0:40:99:0,99,973	0/0:23,0:23:56.97:0,57,557	0/0:14,0:14:33.07:0,33,335	0/0:30,1:31:42.88:0,43,607	0/0:18,0:19:56.95:0,57,562	0/0:32,0:32:90.13:0,90,899	0/0:32,0:32:87.17:0,87,883	0/0:13,0:13:36.03:0,36,354	0/0:13,1:14:18.83:0,19,363	0/0:15,0:15:39.07:0,39,390	0/0:18,1:19:30.86:0,31,488	0/0:21,0:21:57.10:0,57,573	0/0:18,0:19:38.91:0,39,380	0/0:24,0:24:63.04:0,63,612	0/0:26,0:26:60.12:0,60,609	0/0:33,0:33:81.13:0,81,805	0/0:7,0:7:21.04:0,21,213	0/0:16,0:16:48.07:0,48,475	0/0:21,0:21:48.09:0,48,482	0/0:5,0:5:15.03:0,15,152	0/0:24,0:24:63.10:0,63,630	0/0:20,0:20:51.09:0,51,513	0/0:21,1:22:20.40:0,20,377	0/0:8,0:8:18.04:0,18,183
chr10	87599173	.	T	TTTTG	4760.20	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.827;DP=743;FS=7.936;HRun=0;HaplotypeScore=120.4086;InbreedingCoeff=0.9760;MQ=62.23;MQ0=2;MQRankSum=0.458;QD=28.33;ReadPosRankSum=1.600;VQSLOD=4.1223;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:45.01:0,45,674	0/0:18,0:18:36.05:0,36,521	0/0:21,0:17:15.01:0,15,193	0/0:20,0:18:15.41:0,15,234	0/0:32,0:32:75.21:0,75,1140	1/1:15,27:44:8.67:1194,9,0	1/1:12,10:25:15.05:359,15,0	0/0:43,0:43:66.13:0,66,852	0/0:17,0:17:42.12:0,42,634	0/0:28,0:28:63.12:0,63,924	0/0:19,0:19:48.14:0,48,729	0/0:16,0:16:42.12:0,42,627	0/0:29,0:29:66.21:0,66,1044	0/0:19,0:19:36.10:0,36,537	0/0:30,0:30:60.16:0,60,881	0/0:24,0:24:63.19:0,63,972	0/0:29,0:29:72.10:0,72,1057	1/1:7,13:21:21.07:504,21,0	0/0:34,0:32:42.12:0,42,615	0/0:25,0:25:51.12:0,51,773	0/0:26,0:26:47.16:0,47,752	1/1:6,15:21:39.13:830,39,0	1/1:9,12:24:32.96:680,33,0	1/1:19,13:33:54.09:1193,54,0	0/0:24,0:24:57.19:0,57,915	0/0:44,0:45:93.30:0,93,1444	0/0:46,0:46:99:0,114,1705	0/0:8,0:8:21.07:0,21,337
chr10	87599605	.	CT	C	529.32	PASS	AB=1.000;AC=12;AF=0.286;AN=42;BaseQRankSum=-2.273;DP=229;FS=6.282;HRun=2;HaplotypeScore=15.9214;InbreedingCoeff=0.3826;MQ=28.71;MQ0=93;MQRankSum=1.930;QD=5.04;ReadPosRankSum=-0.957;VQSLOD=0.1546;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:11,0:1:2.88:0,3,15	./.	0/0:5,0:2:5.97:0,6,46	./.	./.	1/1:16,8:10:7.12:173,7,0	0/0:4,0:3:5.58:0,6,33	0/0:3,0:1:2.99:0,3,24	0/0:3,0:1:2.98:0,3,21	0/0:6,0:5:14.93:0,15,115	0/0:5,0:4:8.96:0,9,69	0/0:6,0:4:5.80:0,6,50	0/1:10,0:6:2.12:2,0,101	0/0:5,0:4:4.80:0,5,30	0/0:16,0:6:8.90:0,9,60	0/0:6,0:2:5.99:0,6,52	0/1:10,0:1:0:0,0,0	1/1:3,3:4:8.93:63,9,0	1/1:7,0:5:11.61:74,12,0	./.	0/0:3,0:2:2.97:0,3,20	./.	0/0:21,0:9:11.35:0,11,153	0/1:13,0:6:10.95:116,0,11	0/1:10,0:9:7.86:75,0,8	1/1:25,0:17:23.13:160,23,0
chr10	87600777	.	GTTTTTTTGT	G	494.30	PASS	AB=1.000;AC=9;AF=0.188;AN=48;BaseQRankSum=1.931;DP=338;FS=7.593;HRun=0;HaplotypeScore=63.1514;InbreedingCoeff=0.6636;MQ=34.57;MQ0=118;MQRankSum=-4.186;QD=8.83;ReadPosRankSum=2.829;VQSLOD=0.5276;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:32:62.06:0,62,1685	0/0:6,0:5:13.58:0,14,220	./.	./.	0/0:10,0:8:15.05:0,15,537	1/1:2,7:8:9.03:258,9,0	./.	0/0:19,0:13:35.60:0,36,1210	0/0:9,0:7:18.06:0,18,728	0/0:12,0:7:19.73:0,20,387	0/0:7,0:6:11.07:0,11,296	0/0:11,0:7:15.52:0,16,653	0/0:13,0:10:18.02:0,18,487	0/0:9,0:7:21.07:0,21,830	0/0:14,0:8:21.07:0,21,865	0/0:11,0:9:24.08:0,24,895	0/1:27,0:14:19.86:20,0,617	1/1:3,4:8:7.58:176,8,0	0/0:10,0:6:18.04:0,18,612	0/0:7,0:6:18.06:0,18,644	0/0:9,0:6:15.05:0,15,523	./.	1/1:0,3:3:3.01:86,3,0	1/1:2,6:6:3.01:86,3,0	0/0:7,0:5:15.05:0,15,410	0/0:19,0:11:33.11:0,33,1296	0/0:21,0:17:39.60:0,40,1455	0/0:3,0:3:9.03:0,9,282
chr10	87600785	.	GT	G	1197.87	PASS	AC=20;AF=0.400;AN=50;BaseQRankSum=5.477;DP=356;FS=2.222;HRun=9;HaplotypeScore=31.4764;InbreedingCoeff=0.8631;MQ=35.62;MQ0=124;MQRankSum=-0.839;QD=9.82;ReadPosRankSum=3.284;VQSLOD=0.7917;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:28:63.03:576,63,0	1/1:0,6:5:15.01:137,15,0	./.	./.	0/0:12,0:10:19.87:0,20,213	1/1:7,0:7:7.49:28,7,0	1/1:1,8:8:3:27,3,0	0/0:20,0:15:33.53:0,34,365	0/0:11,0:9:24.07:0,24,273	1/1:1,10:7:21.01:192,21,0	1/1:1,7:7:12.01:110,12,0	0/0:11,0:8:18.01:0,18,190	0/0:12,0:9:18.01:0,18,193	0/0:8,0:7:21.06:0,21,242	0/0:14,0:8:21.06:0,21,240	0/0:10,1:9:24.07:0,24,271	1/1:7,24:17:27.02:252,27,0	1/1:5,0:5:7.99:45,8,0	0/0:12,0:7:18.02:0,18,194	0/0:9,0:8:24.07:0,24,277	0/0:8,0:6:15.04:0,15,170	./.	1/1:3,0:3:2.50:9,2,0	1/1:8,0:6:2.50:9,2,0	0/0:8,0:6:15.04:0,15,173	0/0:20,0:12:36.11:0,36,416	0/0:20,0:17:36.11:0,36,412	0/0:4,0:4:12.03:0,12,133
chr10	87600958	.	GA	G	904.68	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=8.624;DP=424;FS=1.279;HRun=10;HaplotypeScore=46.0054;InbreedingCoeff=0.9262;MQ=60.79;MQ0=9;MQRankSum=1.553;QD=16.75;ReadPosRankSum=1.505;VQSLOD=3.9232;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:22:51.40:0,51,531	0/0:5,0:5:15.04:0,15,166	0/0:31,0:5:11.90:0,12,90	0/0:31,0:11:4.60:0,5,26	0/0:17,0:18:41.09:0,41,415	1/1:0,12:12:29.98:260,30,0	1/1:0,7:7:12:104,12,0	0/0:28,1:28:40.99:0,41,657	0/0:13,0:13:33.08:0,33,358	0/0:16,0:16:27.07:0,27,292	0/0:14,1:15:10.03:0,10,322	0/0:11,0:11:27.07:0,27,297	0/0:10,0:10:24.06:0,24,265	0/0:6,0:6:18.05:0,18,199	0/0:5,0:5:12.02:0,12,124	0/0:16,0:16:42.11:0,42,463	0/0:26,0:26:75.20:0,75,829	1/1:3,14:17:26.30:346,26,0	0/0:18,0:16:42.11:0,42,464	0/0:13,0:13:36.09:0,36,389	0/0:11,0:11:33.07:0,33,354	./.	1/1:0,10:10:23.91:208,24,0	1/1:1,7:8:17.62:156,18,0	0/0:24,0:24:65.03:0,65,678	0/0:13,0:13:32.30:0,32,337	0/0:27,0:27:75.17:0,75,806	0/0:9,0:9:18.05:0,18,199
chr10	87601442	.	TTTCTC	T	3069.91	PASS	AB=0.931;AC=9;AF=0.161;AN=56;BaseQRankSum=8.948;DP=527;FS=2.426;HRun=0;HaplotypeScore=101.2865;InbreedingCoeff=0.8587;MQ=80.20;MQ0=0;MQRankSum=-1.474;QD=34.49;ReadPosRankSum=1.244;VQSLOD=3.4390;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.24:0,87,2552	1/1:0,4:4:12.04:256,12,0	0/0:19,0:19:52.07:0,52,1316	0/0:27,0:26:57.43:0,57,1688	0/0:20,0:20:60.21:0,60,1731	0/0:17,0:17:51.17:0,51,1545	0/0:14,0:14:42.13:0,42,1175	0/0:26,0:26:69.22:0,69,2029	0/0:15,0:15:45.14:0,45,1291	1/1:0,21:21:63.14:1143,63,0	1/1:1,19:20:51.13:1041,51,0	0/0:22,0:22:57.16:0,57,1711	0/0:20,0:20:57.20:0,57,1734	0/0:21,0:21:63.22:0,63,1972	0/0:26,0:26:78.25:0,78,2208	0/0:15,0:15:36.12:0,36,1075	1/1:1,16:17:36.12:767,36,0	0/0:24,0:24:72.23:0,72,2061	0/0:23,0:23:65.41:0,65,1949	0/0:18,0:18:48.16:0,48,1410	0/0:17,0:17:48.15:0,48,1387	0/0:13,0:13:39.12:0,39,1103	0/0:16,0:16:42.14:0,42,1167	0/0:14,0:14:42.14:0,42,1289	0/0:13,0:13:39.13:0,39,1220	0/1:25,2:27:27.09:27,0,2092	0/0:20,0:19:57.18:0,57,1712	0/0:8,0:8:24.03:0,24,542
chr10	87601812	.	G	GA	1791.93	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=-5.866;DP=489;FS=0.000;HRun=10;HaplotypeScore=56.5693;InbreedingCoeff=0.7633;MQ=79.80;MQ0=0;MQRankSum=0.350;QD=15.58;ReadPosRankSum=0.796;VQSLOD=3.7741;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:59.13:0,59,511	1/1:0,5:5:12.03:128,12,0	0/1:20,0:20:2.06:2,0,119	0/1:12,0:12:2.18:2,0,95	0/0:27,0:27:77.91:0,78,640	0/0:13,0:13:29.96:0,30,246	0/0:9,0:9:23.95:0,24,193	0/0:22,0:22:50.89:0,51,414	0/0:20,0:20:44.94:0,45,369	1/1:3,21:24:63.13:662,63,0	1/1:3,13:17:38.85:373,39,0	0/0:16,0:16:32.94:0,33,268	0/0:15,1:16:6.97:0,7,263	0/0:20,0:20:44.94:0,45,369	0/0:15,0:15:35.73:0,36,292	0/0:18,1:19:18.99:0,19,362	1/1:7,29:37:75.02:782,75,0	0/0:20,0:21:49.89:0,50,388	0/0:15,0:15:7.20:0,7,263	0/0:15,1:17:12:0,12,294	0/0:15,0:15:41.94:0,42,344	0/0:7,0:7:14.97:0,15,123	0/0:12,0:12:22.61:0,23,236	0/0:16,0:16:38.94:0,39,320	0/0:16,0:16:47.92:0,48,391	0/0:16,1:17:6.81:0,7,253	0/0:23,0:23:47.92:0,48,394	0/0:13,0:13:32.85:0,33,261
chr10	87604126	.	C	CTTTG	4279.11	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.572;DP=599;FS=1.070;HRun=0;HaplotypeScore=92.2423;InbreedingCoeff=0.9731;MQ=62.80;MQ0=0;MQRankSum=3.019;QD=36.26;ReadPosRankSum=1.669;VQSLOD=4.5392;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,120,1919	0/0:13,0:13:33.11:0,33,546	0/0:20,0:17:12.50:0,13,177	0/0:14,0:13:11.04:0,11,197	0/0:26,0:26:59.97:0,60,821	1/1:9,14:24:33.11:812,33,0	1/1:11,13:25:30.10:738,30,0	0/0:30,0:30:51.16:0,51,796	0/0:23,0:23:54.14:0,54,824	0/0:20,0:20:39.11:0,39,596	0/0:16,0:16:27.05:0,27,373	0/0:24,0:24:54.09:0,54,836	0/0:12,0:12:24.05:0,24,346	0/0:16,0:16:42.13:0,42,670	0/0:18,0:18:39.13:0,39,645	0/0:21,0:21:51.17:0,51,834	0/0:36,0:36:87.21:0,87,1285	1/1:6,16:23:36.09:884,36,0	0/0:25,0:25:48.15:0,48,751	0/0:19,0:19:42.14:0,42,695	0/0:21,0:21:54.18:0,54,899	1/1:3,6:9:15.05:369,15,0	1/1:7,7:14:12.04:296,12,0	1/1:4,18:23:48.16:1181,48,0	0/0:18,0:18:39.13:0,39,627	0/0:25,0:25:60.15:0,60,935	0/0:29,0:29:75.19:0,75,1147	0/0:8,0:8:15:0,15,195
chr10	87604582	.	CTT	C	1318.44	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.132;DP=386;FS=9.999;HRun=15;HaplotypeScore=56.3517;InbreedingCoeff=0.8246;MQ=61.07;MQ0=8;MQRankSum=1.163;QD=11.77;ReadPosRankSum=2.798;VQSLOD=1.7240;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,19:33:41.18:391,41,0	0/0:5,0:6:15.03:0,15,176	0/0:33,0:6:3.01:0,3,30	0/0:19,0:8:14.21:0,14,92	0/0:14,0:14:14.48:0,14,350	1/1:5,16:21:32.93:289,33,0	1/1:4,8:12:14.92:132,15,0	0/0:32,0:33:59.93:0,60,694	0/0:4,0:4:6.02:0,6,82	0/0:17,0:18:40.15:0,40,470	0/0:10,0:10:21.06:0,21,269	0/0:7,0:7:15.03:0,15,187	0/0:9,0:10:23.56:0,24,280	0/0:2,0:3:8.52:0,9,90	0/0:13,0:14:26.55:0,27,316	0/0:5,0:5:12.02:0,12,146	0/0:30,0:31:85.97:0,86,1008	1/1:8,18:27:44.57:426,45,0	0/0:23,0:23:45.08:0,45,531	0/0:2,0:3:0.47:0,0,1	0/0:7,0:7:15.05:0,15,204	0/0:1,0:2:0:0,0,0	1/1:3,4:7:14.65:117,15,0	1/1:4,6:10:17.70:142,18,0	0/0:3,0:4:6.01:0,6,69	0/0:12,0:12:18.05:0,18,229	0/0:6,0:7:14.48:0,14,130	0/0:4,0:5:14.53:0,15,157
chr10	87606906	.	CCCAGTG	C	2389.89	PASS	AB=0.914;AC=9;AF=0.161;AN=56;BaseQRankSum=7.737;DP=652;FS=5.947;HRun=0;HaplotypeScore=137.4715;InbreedingCoeff=0.8257;MQ=84.95;MQ0=0;MQRankSum=-8.645;QD=26.55;ReadPosRankSum=0.257;VQSLOD=3.0924;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,172,4423	1/1:0,2:2:6.02:141,6,0	0/0:24,0:24:66.21:0,66,1959	0/0:19,0:19:52.99:0,53,1497	0/0:17,0:17:48.14:0,48,1598	0/0:23,0:23:66.21:0,66,2174	0/0:29,0:29:81.28:0,81,2693	0/0:16,0:16:45.12:0,45,1254	0/0:27,0:27:75.22:0,75,2317	1/1:0,19:19:56.98:1089,57,0	1/1:0,5:5:12.04:281,12,0	0/0:24,0:24:69.24:0,69,2429	0/0:19,0:19:54.19:0,54,1857	0/0:15,0:15:42.13:0,42,1403	0/0:25,0:25:72.22:0,72,2317	0/0:18,0:18:54.16:0,54,1615	1/1:7,25:32:39.13:915,39,0	0/0:35,0:35:99:0,99,3483	0/0:19,0:19:51.17:0,51,1566	0/0:20,0:20:54.16:0,54,1510	0/0:51,0:51:99:0,141,4568	0/0:12,0:12:36.12:0,36,1254	0/0:14,0:14:42.13:0,42,1403	0/0:45,0:45:99:0,129,4221	0/0:21,0:21:60.17:0,60,1883	0/1:29,3:32:99:121,0,2448	0/0:26,0:26:75.22:0,75,2427	0/0:5,0:5:15.05:0,15,531
chr10	87607640	.	C	CG	370.77	PASS	AB=0.700;AC=6;AF=0.150;AN=40;BaseQRankSum=-0.622;DP=171;FS=2.393;HRun=9;HaplotypeScore=34.4711;InbreedingCoeff=0.1741;MQ=81.08;MQ0=0;MQRankSum=0.114;QD=10.02;ReadPosRankSum=0.067;VQSLOD=1.1765;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:14.98:0,15,129	./.	0/0:6,0:6:6.24:0,6,35	0/0:6,0:3:2.99:0,3,24	0/0:1,0:1:2.50:0,2,9	./.	0/0:22,0:22:51.58:0,52,487	./.	0/0:3,0:3:6:0,6,52	1/1:4,3:7:7.26:69,7,0	1/1:2,0:2:0.89:2,1,0	./.	0/0:2,0:2:6:0,6,52	0/0:2,0:2:3:0,3,26	0/0:5,0:5:11.98:0,12,103	0/0:1,0:1:3:0,3,26	0/1:8,16:24:29.71:383,0,30	0/0:21,0:22:50.01:0,50,421	0/1:3,1:4:15.15:15,0,42	./.	0/0:27,0:27:19.79:0,20,328	0/0:1,0:1:3:0,3,26	./.	0/0:12,0:12:29.99:0,30,260	./.	0/0:6,0:6:5.73:0,6,37	0/0:2,0:2:6:0,6,52	./.
chr10	87610665	.	CGTGTGTGT	C	194.77	PASS	AB=0.911;AC=6;AF=0.176;AN=34;BaseQRankSum=3.104;DP=279;FS=4.769;HRun=0;HaplotypeScore=60.5481;InbreedingCoeff=0.0537;MQ=53.46;MQ0=22;MQRankSum=-1.597;QD=2.86;ReadPosRankSum=-0.843;VQSLOD=1.1804;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:13:0:0,0,0	./.	./.	./.	0/0:4,0:3:6.01:0,6,109	./.	0/1:22,0:22:45.19:45,0,53	./.	0/0:5,0:4:6.02:0,6,141	1/1:5,0:6:5.97:86,6,0	./.	0/0:5,0:5:9:0,9,107	0/0:10,0:10:18.04:0,18,560	0/0:9,0:9:9.03:0,9,184	0/0:4,0:3:9.03:0,9,322	0/0:7,0:7:9.03:0,9,365	0/1:19,2:21:45.79:93,0,46	0/1:9,4:13:19.83:66,0,20	./.	./.	0/0:39,0:37:33.07:0,33,1002	./.	./.	./.	0/0:2,0:2:6.01:0,6,96	0/0:6,0:7:9.03:0,9,267	0/1:5,0:5:10.92:11,0,23	0/0:4,0:4:6.02:0,6,143
chr10	87611039	.	ACT	A	2795.69	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.771;DP=696;FS=6.959;HRun=0;HaplotypeScore=79.5336;InbreedingCoeff=0.9997;MQ=91.63;MQ0=0;MQRankSum=-2.984;QD=34.51;ReadPosRankSum=1.541;VQSLOD=5.9908;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,159,2805	1/1:0,11:11:30.10:425,30,0	0/0:30,0:29:87.25:0,87,1549	0/0:27,0:27:78.27:0,78,1399	0/0:18,0:18:51.16:0,51,882	0/0:23,0:23:60.21:0,60,1099	0/0:33,0:33:96.33:0,96,1752	0/0:21,0:21:51.16:0,51,880	0/0:20,0:20:60.21:0,60,1091	1/1:0,19:19:54.18:774,54,0	1/1:0,15:15:33.11:467,33,0	0/0:29,0:29:81.25:0,81,1424	0/0:26,0:26:78.27:0,78,1428	0/0:25,0:25:75.26:0,75,1375	0/0:27,0:27:78.25:0,78,1399	0/0:19,0:19:57.20:0,57,1034	1/1:2,34:36:90.30:1290,90,0	0/0:16,0:16:48.16:0,48,873	0/0:23,0:23:63.20:0,63,1111	0/0:16,0:16:45.15:0,45,813	0/0:55,0:55:99:0,163,2920	0/0:22,0:22:66.23:0,66,1203	0/0:16,0:16:48.16:0,48,872	0/0:27,0:27:75.26:0,75,1352	0/0:14,0:14:36.12:0,36,660	0/0:34,0:34:96.32:0,96,1729	0/0:27,0:27:81.28:0,81,1474	0/0:11,0:11:33.11:0,33,604
chr10	87611535	.	GT	G	922.33	PASS	AB=0.792;AC=13;AF=0.232;AN=56;BaseQRankSum=5.070;DP=567;FS=15.081;HRun=14;HaplotypeScore=72.2576;InbreedingCoeff=0.3789;MQ=76.62;MQ0=0;MQRankSum=-0.303;QD=5.24;ReadPosRankSum=5.432;VQSLOD=0.6720;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:42,4:46:2.93:3,0,594	0/0:5,0:5:9:0,9,81	0/0:26,0:21:3.45:0,3,101	0/0:13,0:10:3.76:0,4,16	0/0:24,4:28:12.80:0,13,232	1/1:2,12:14:29.74:205,30,0	1/1:9,16:26:20.93:285,21,0	0/0:23,2:24:19.66:0,20,299	0/0:19,0:23:25.09:0,25,242	0/0:24,1:25:1.71:0,2,279	0/0:13,0:14:9.05:0,9,201	0/0:24,0:24:53.52:0,54,470	0/1:12,2:14:14.15:14,0,165	0/1:13,2:15:20.15:20,0,115	0/0:22,3:25:21.43:0,21,330	0/0:13,2:17:0.55:0,1,262	0/0:24,2:27:21.74:0,22,349	0/1:5,10:15:1.10:138,0,1	0/0:27,1:27:15.86:0,16,256	0/0:12,1:13:1.64:0,2,138	0/0:18,1:20:24:0,24,212	0/1:8,7:15:6.99:102,0,7	1/1:5,5:10:14.65:98,15,0	1/1:6,15:21:10.80:219,11,0	0/0:14,0:14:27:0,27,238	0/0:26,3:29:3.09:0,3,280	0/0:17,3:20:1.17:0,1,113	0/0:14,1:15:15.35:0,15,253
chr10	87611631	.	CCTGCCT	C	595.55	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.275;DP=519;FS=30.334;HRun=0;HaplotypeScore=104.2549;InbreedingCoeff=0.7396;MQ=73.43;MQ0=7;MQRankSum=-5.337;QD=18.61;ReadPosRankSum=-0.836;VQSLOD=1.4564;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,18:32:33.11:690,33,0	0/0:7,0:7:12.04:0,12,346	0/0:28,0:20:20.86:0,21,569	0/0:18,0:17:11.87:0,12,203	0/0:9,0:9:9.03:0,9,297	0/0:18,0:18:33.11:0,33,1057	0/0:22,0:22:45.15:0,45,1319	0/0:21,0:20:33.99:0,34,890	0/0:23,0:23:45.15:0,45,1452	0/0:18,0:17:21.05:0,21,594	0/0:9,0:9:10.28:0,10,281	0/0:18,0:17:39.13:0,39,1168	0/0:13,0:13:33.11:0,33,1073	0/0:16,0:16:33.11:0,33,1025	0/0:34,0:34:72.25:0,72,2307	0/0:19,0:19:42.14:0,42,1384	0/0:24,0:25:51.17:0,51,1585	0/0:27,0:27:69.18:0,69,2023	0/0:19,0:18:30.08:0,30,783	0/0:9,0:9:12.04:0,12,395	0/0:32,0:31:57.18:0,57,1728	0/0:7,0:7:13.27:0,13,322	0/0:4,0:4:6.02:0,6,196	0/0:24,0:24:54.19:0,54,1767	0/0:7,0:7:18.06:0,18,498	0/0:18,0:18:27.09:0,27,807	0/0:31,0:31:72.25:0,72,2277	0/0:11,0:11:27.09:0,27,788
chr10	87611939	.	C	CT	2276.01	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.352;DP=535;FS=3.171;HRun=0;HaplotypeScore=65.3156;InbreedingCoeff=0.9882;MQ=63.67;MQ0=2;MQRankSum=-1.300;QD=32.99;ReadPosRankSum=1.430;VQSLOD=3.2418;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1655	1/1:0,6:5:15.05:193,15,0	0/0:20,0:16:45.14:0,45,610	0/0:20,0:18:54.18:0,54,750	0/0:22,0:22:66.22:0,66,922	0/0:12,0:12:36.12:0,36,502	0/0:23,0:23:69.20:0,69,926	0/0:25,0:25:69.20:0,69,931	0/0:15,0:15:45.14:0,45,612	1/1:3,20:23:59.71:814,60,0	1/1:1,4:5:15.04:195,15,0	0/0:17,0:17:48.16:0,48,671	0/0:11,0:11:33.11:0,33,461	0/0:16,0:16:45.14:0,45,609	0/0:14,0:14:39.12:0,39,529	0/0:15,0:15:45.14:0,45,612	1/1:0,35:35:90.29:1231,90,0	0/0:27,0:27:78.26:0,78,1091	0/0:16,0:16:37.91:0,38,461	0/0:18,0:18:54.17:0,54,739	0/0:42,0:42:99:0,126,1740	0/0:12,0:12:33.11:0,33,461	0/0:9,0:9:27.09:0,27,378	0/0:22,0:22:60.19:0,60,822	0/0:21,0:20:57.19:0,57,797	0/0:23,1:24:29.44:0,29,918	0/0:19,0:19:57.19:0,57,797	0/0:6,0:6:18.06:0,18,252
chr10	87613548	.	TC	T	3001.85	PASS	AB=0.924;AC=36;AF=0.643;AN=56;BaseQRankSum=-1.091;DP=422;FS=18.645;HRun=11;HaplotypeScore=49.8681;InbreedingCoeff=0.6286;MQ=72.95;MQ0=1;MQRankSum=0.161;QD=9.41;ReadPosRankSum=2.971;VQSLOD=0.8035;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:17,1:18:6.59:7,0,141	0/0:4,0:4:0:0,0,0	0/1:27,1:17:16.49:16,0,170	0/0:27,0:20:37.48:0,37,295	0/0:11,0:10:12.02:0,12,119	1/1:6,11:17:23.95:197,24,0	1/1:3,14:17:6.79:263,7,0	1/1:14,11:25:26.23:217,26,0	0/0:16,0:15:31.25:0,31,285	1/1:6,10:16:23.95:197,24,0	1/1:5,1:6:2.98:25,3,0	0/1:15,1:16:3.59:4,0,147	0/0:11,0:11:7.85:0,8,94	0/0:5,0:5:6.02:0,6,64	0/1:12,3:15:3.63:4,0,148	0/0:21,1:22:26.27:0,26,440	1/1:1,18:19:44.95:369,45,0	1/1:7,17:24:38.93:320,39,0	1/1:8,7:15:26.90:216,27,0	1/1:5,5:10:17.92:141,18,0	1/1:5,8:13:23.96:197,24,0	1/1:1,8:9:20.97:172,21,0	1/1:7,6:13:14.88:110,15,0	1/1:4,6:10:17.97:147,18,0	0/0:7,0:6:6.02:0,6,64	1/1:11,8:19:23.93:197,24,0	1/1:1,15:15:32.95:271,33,0	1/1:6,6:12:14.96:123,15,0
chr10	87613727	.	CGAACTCACAGAGA	C	795.02	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=4.466;DP=382;FS=11.034;HRun=0;HaplotypeScore=129.0593;InbreedingCoeff=0.8009;MQ=68.79;MQ0=5;MQRankSum=-4.005;QD=53.00;ReadPosRankSum=0.493;VQSLOD=2.6404;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:36.12:0,36,2117	1/1:0,2:2:6.02:230,6,0	0/0:26,0:16:35.68:0,36,1913	0/0:25,0:17:39.13:0,39,1691	0/0:8,0:8:12.04:0,12,724	0/0:15,0:15:42.14:0,42,2425	0/0:18,0:18:42.14:0,42,2339	0/0:15,0:14:36.11:0,36,1532	0/0:13,0:13:36.12:0,36,2268	1/1:1,0:1:3.01:109,3,0	./.	0/0:15,0:15:39.13:0,39,2384	0/0:12,0:12:30.10:0,30,1722	0/0:9,0:9:24.08:0,24,1538	0/0:13,0:13:33.11:0,33,1999	0/0:18,0:18:51.18:0,51,3171	1/1:4,8:12:15.05:575,15,0	0/0:28,0:28:69.22:0,69,4117	0/0:13,0:12:33.11:0,33,1647	0/0:5,0:5:12.04:0,12,628	0/0:31,0:31:78.27:0,78,4459	0/0:8,0:8:18.06:0,18,850	0/0:4,0:4:6.02:0,6,374	0/0:37,0:37:99:0,102,6138	0/0:6,0:6:9.03:0,9,532	0/0:10,0:10:24.08:0,24,1465	0/0:11,0:11:33.11:0,33,1947	0/0:5,0:5:15.05:0,15,943
chr10	87613958	.	CGA	C	688.48	PASS	AB=0.923;AC=27;AF=0.563;AN=48;BaseQRankSum=-1.029;DP=224;FS=1.499;HRun=0;HaplotypeScore=133.8376;InbreedingCoeff=-0.0370;MQ=63.34;MQ0=1;MQRankSum=0.504;QD=4.12;ReadPosRankSum=0.365;VQSLOD=3.0829;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:4,0:4:2.76:20,3,0	0/1:10,0:7:19.54:20,0,34	0/1:8,0:6:14.16:14,0,25	0/0:5,0:5:0.47:0,0,1	0/1:8,0:10:3.20:12,0,3	1/1:10,0:10:4.16:32,4,0	1/1:11,0:11:11.88:83,12,0	0/1:8,2:10:17.79:24,0,18	0/1:11,0:11:14.35:102,0,14	./.	0/1:11,0:11:3.52:13,0,4	1/1:8,1:9:0.04:51,0,0	0/1:10,1:11:43.36:55,0,43	0/1:7,0:7:5.97:6,0,21	0/1:4,5:9:11.17:113,0,11	0/0:6,0:5:2.51:0,3,7	0/0:7,0:10:11.86:0,12,64	1/1:10,0:10:1.08:17,1,0	1/1:3,0:3:0.89:2,1,0	1/1:4,1:5:3:25,3,0	./.	./.	0/0:7,0:8:0.84:0,1,2	0/0:4,0:4:2.99:0,3,24	1/1:17,0:17:28.63:187,29,0	1/1:8,0:8:5.94:41,6,0	0/0:1,0:1:1.55:0,2,4
chr10	87613959	.	GAGTGCGTC	G	2028.37	PASS	AB=0.992;AC=33;AF=0.688;AN=48;BaseQRankSum=-5.234;DP=209;FS=2.979;HRun=0;HaplotypeScore=133.6140;InbreedingCoeff=-0.1696;MQ=62.74;MQ0=1;MQRankSum=1.443;QD=11.40;ReadPosRankSum=-2.089;VQSLOD=2.5538;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:4,0:4:3.01:38,3,0	0/1:10,0:7:49.28:129,0,49	0/1:8,0:5:13.19:48,0,13	0/1:5,0:5:0:0,0,0	0/1:10,0:10:41.37:64,0,41	1/1:10,0:10:8.92:87,9,0	1/1:0,7:7:20.95:275,21,0	0/1:10,0:10:37.26:54,0,37	0/1:11,0:11:45.90:300,0,46	./.	1/1:12,0:11:3.06:60,3,0	0/1:9,0:9:15.19:103,0,15	0/1:10,0:10:56.83:57,0,123	0/1:6,0:6:23.64:24,0,56	0/1:9,0:9:5.56:6,0,108	1/1:6,0:5:0.65:47,1,0	0/1:8,0:8:1.38:1,0,204	1/1:0,8:8:17.86:178,18,0	1/1:0,3:3:3.01:41,3,0	1/1:5,0:5:3.01:39,3,0	./.	./.	0/0:7,0:7:0.44:0,0,1	0/0:3,0:3:3.01:0,3,50	1/1:18,0:18:41.86:400,42,0	1/1:0,7:7:6.02:169,6,0	1/1:1,0:1:3.01:41,3,0
chr10	87613963	.	GCGTC	G	1650.42	PASS	AB=0.992;AC=37;AF=0.771;AN=48;BaseQRankSum=-1.986;DP=231;FS=0.000;HRun=0;HaplotypeScore=134.6203;InbreedingCoeff=-0.1082;MQ=57.93;MQ0=1;MQRankSum=1.298;QD=7.86;ReadPosRankSum=1.493;VQSLOD=2.8066;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:8:0:0,0,0	1/1:4,0:4:3.01:37,3,0	0/1:10,0:6:48.20:73,0,48	0/1:9,0:5:19.46:20,0,19	./.	0/1:11,0:11:7.28:48,0,7	1/1:12,0:12:8.72:49,9,0	1/1:7,0:7:11.99:150,12,0	0/1:9,1:10:11.88:44,0,12	1/1:14,0:13:22.78:206,23,0	0/1:5,0:5:0:0,0,0	1/1:12,1:12:8.94:84,9,0	1/1:11,0:11:16.12:122,16,0	0/1:9,0:9:47.83:48,0,53	0/1:8,0:8:4.46:4,0,7	0/1:12,0:12:17.38:49,0,17	1/1:6,0:5:5.54:52,6,0	0/1:9,0:9:27.08:27,0,43	1/1:8,0:8:14.86:108,15,0	1/1:3,0:3:2.92:17,3,0	1/1:4,1:5:3.01:47,3,0	./.	./.	0/1:8,0:8:0.10:0,0,0	./.	1/1:0,19:19:50.60:483,51,0	1/1:7,0:7:6.02:83,6,0	1/1:1,0:1:2.96:19,3,0
chr10	87617124	.	GCGTGCGCGCGCGCACACACACACACA	G	2010.97	PASS	AB=0.558;AC=3;AF=0.054;AN=56;BaseQRankSum=2.733;DP=289;FS=3.583;HRun=0;HaplotypeScore=173.6157;InbreedingCoeff=0.1851;MQ=57.58;MQ0=6;MQRankSum=-0.508;QD=71.82;ReadPosRankSum=-0.445;VQSLOD=3.1809;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:11.80:0,12,510	0/0:8,0:7:17.64:0,18,917	0/0:3,0:1:3.01:0,3,59	0/0:6,0:5:7.55:0,8,106	0/0:9,0:9:21.07:0,21,1683	0/0:10,0:9:12.04:0,12,580	0/0:10,0:9:5.97:0,6,325	0/0:13,0:13:24.08:0,24,836	0/0:5,0:5:15.04:0,15,1166	0/0:18,0:18:51.17:0,51,2621	0/0:24,0:24:45.15:0,45,2342	0/0:3,0:3:9.03:0,9,654	0/0:8,0:8:20.10:0,20,1042	0/0:6,0:6:12.04:0,12,818	0/0:2,0:2:6.02:0,6,491	0/0:3,0:3:9.03:0,9,400	0/0:32,0:32:62.50:0,63,2729	0/0:22,0:22:24.08:0,24,1888	0/0:10,0:8:24.08:0,24,817	0/0:6,0:5:5.79:0,6,373	0/0:9,0:8:12.04:0,12,490	0/0:7,0:7:8.96:0,9,411	0/0:7,0:7:2.54:0,3,72	0/0:10,0:10:5.27:0,5,99	0/0:7,0:7:8.19:0,8,612	0/1:5,18:21:99:1888,0,219	0/0:9,0:9:24.07:0,24,925	1/1:3,1:4:3.01:213,3,0
chr10	87617136	.	G	GCGCACACA	1278.19	PASS	AB=0.836;AC=17;AF=0.315;AN=54;BaseQRankSum=-1.616;DP=323;FS=4.393;HRun=0;HaplotypeScore=111.2422;InbreedingCoeff=-0.0161;MQ=52.69;MQ0=12;MQRankSum=0.243;QD=6.69;ReadPosRankSum=-0.971;VQSLOD=1.8496;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:17:28.90:41,0,29	0/1:5,0:8:32.94:33,0,68	./.	0/0:4,0:3:2.84:0,3,22	0/0:13,0:13:30.06:0,30,503	1/1:2,5:7:3.01:134,3,0	0/0:5,9:12:1.86:0,2,23	0/0:10,0:12:8.94:0,9,67	0/0:4,0:4:11.98:0,12,195	0/1:10,0:17:99:117,0,268	0/1:9,0:23:98.18:126,0,98	0/1:3,0:5:6.44:6,0,12	0/1:5,0:6:8.35:69,0,8	0/1:1,0:6:6.24:6,0,11	0/1:3,0:2:18.94:19,0,81	0/0:3,0:4:6.02:0,6,123	0/1:19,0:34:99:166,0,121	1/1:6,19:28:6.06:569,6,0	0/0:7,0:7:17.78:0,18,195	0/0:7,0:11:6.01:0,6,92	0/0:4,0:10:3:0,3,25	1/1:0,6:9:2.84:132,3,0	0/1:3,5:11:0:0,0,0	0/1:0,8:14:0:0,0,0	0/0:5,0:11:8.98:0,9,72	0/0:23,0:20:5.48:0,5,383	0/0:3,0:7:14.69:0,15,192	0/0:1,0:1:3.01:0,3,56
chr10	87619221	.	TG	T	635.50	PASS	AB=0.888;AC=22;AF=0.393;AN=56;BaseQRankSum=0.853;DP=196;FS=4.695;HRun=8;HaplotypeScore=45.9751;InbreedingCoeff=0.6935;MQ=84.15;MQ0=0;MQRankSum=-4.760;QD=10.09;ReadPosRankSum=0.465;VQSLOD=1.2965;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:8,1:9:13.93:14,0,130	1/1:1,2:3:8.23:65,8,0	0/0:15,0:14:26.33:0,26,242	0/0:13,0:12:17.04:0,17,167	0/0:8,0:8:21.06:0,21,246	1/1:0,7:7:21.03:202,21,0	1/1:4,5:9:17.97:168,18,0	0/0:12,0:12:27.03:0,27,287	0/0:7,0:7:21.06:0,21,247	1/1:1,2:3:3:29,3,0	1/1:2,1:3:6.01:57,6,0	0/0:9,0:9:17.72:0,18,169	0/0:5,0:5:15.05:0,15,179	0/0:9,0:9:24.06:0,24,267	0/0:10,0:10:27.08:0,27,318	0/0:5,0:5:12.03:0,12,138	1/1:4,1:5:8.03:58,8,0	1/1:6,1:7:8.67:49,9,0	0/1:6,1:7:10.93:11,0,156	0/0:4,0:4:9.49:0,9,100	0/0:6,0:6:12.04:0,12,145	1/1:1,3:4:9.01:86,9,0	1/1:2,3:5:8.50:67,9,0	1/1:1,0:1:2.99:24,3,0	0/0:3,0:3:9.03:0,9,107	0/0:2,0:2:6.02:0,6,72	0/0:14,0:14:42.11:0,42,486	0/0:11,0:11:30.08:0,30,344
chr10	87619466	.	C	CG	6887.84	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=-6.825;DP=517;FS=13.808;HRun=1;HaplotypeScore=70.2403;InbreedingCoeff=0.8208;MQ=81.17;MQ0=0;MQRankSum=-1.948;QD=23.27;ReadPosRankSum=-1.362;VQSLOD=3.3566;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:10:20.88:159,21,0	0/1:2,0:2:0:0,0,0	0/1:13,0:13:14.56:15,0,265	0/0:14,0:15:15.76:0,16,218	0/0:14,0:14:39.07:0,39,471	1/1:1,0:15:2.90:22,3,0	1/1:1,0:26:29.73:215,30,0	1/1:0,28:28:78.10:1010,78,0	0/0:26,0:26:69.15:0,69,845	0/0:8,0:8:16.24:0,16,136	0/0:4,0:4:5.04:0,5,33	0/0:29,0:29:87.22:0,87,1078	0/0:25,0:25:72.23:0,72,930	0/0:24,0:24:63.16:0,63,783	0/0:24,0:24:72.16:0,72,892	0/0:16,0:16:48.16:0,48,618	0/0:24,0:24:29.29:0,29,110	1/1:0,1:28:41.11:297,41,0	1/1:0,21:21:63.02:807,63,0	1/1:1,11:12:30.10:436,30,0	1/1:0,50:50:99:2011,138,0	1/1:0,0:11:5.96:43,6,0	1/1:0,1:11:3.01:34,3,0	1/1:1,0:23:16.88:165,17,0	0/0:12,0:12:36.08:0,36,436	1/1:0,18:18:48.14:679,48,0	1/1:0,19:19:48.12:699,48,0	1/1:0,7:8:21.07:297,21,0
chr10	87619669	.	CT	C	1135.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.520;DP=561;FS=10.055;HRun=1;HaplotypeScore=68.5951;InbreedingCoeff=0.9264;MQ=78.32;MQ0=0;MQRankSum=-3.229;QD=35.50;ReadPosRankSum=0.555;VQSLOD=3.1455;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:90.25:1231,90,0	0/0:3,0:3:9.03:0,9,131	0/0:20,0:20:57.18:0,57,817	0/0:15,0:15:29.83:0,30,399	0/0:11,0:11:30.10:0,30,431	0/0:11,0:11:27.08:0,27,393	0/0:34,0:34:99:0,99,1365	0/0:19,0:19:51.11:0,51,707	0/0:22,0:22:66.21:0,66,945	0/0:14,0:14:39.11:0,39,545	0/0:11,0:11:33.09:0,33,444	0/0:21,0:21:54.16:0,54,771	0/0:21,0:21:63.21:0,63,919	0/0:22,0:22:63.20:0,63,899	0/0:34,0:34:99:0,102,1485	0/0:19,0:19:57.18:0,57,813	0/0:31,0:31:90.30:0,90,1311	0/0:20,0:20:60.14:0,60,832	0/0:25,0:25:72.05:0,72,999	0/0:11,0:11:30.08:0,30,408	0/0:59,0:59:99:0,168,2240	0/0:10,0:10:30.05:0,30,395	0/0:12,0:12:36.09:0,36,479	0/0:30,0:29:67.41:0,67,1036	0/0:9,0:9:24.08:0,24,347	0/0:14,0:14:40.02:0,40,571	0/0:26,0:26:72.02:0,72,972	0/0:5,0:5:15.05:0,15,217
chr10	87622783	.	CCA	C	387.01	PASS	AB=0.928;AC=20;AF=0.385;AN=52;BaseQRankSum=8.519;DP=696;FS=12.495;HRun=0;HaplotypeScore=120.2130;InbreedingCoeff=0.2326;MQ=58.38;MQ0=20;MQRankSum=-3.219;QD=1.21;ReadPosRankSum=0.778;VQSLOD=1.8299;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:34:10.21:0,10,218	1/1:8,0:8:5.60:26,6,0	0/0:29,0:13:3.01:0,3,46	0/0:35,0:20:11.96:0,12,111	0/1:21,2:22:57.77:58,0,58	1/1:27,0:24:17.26:79,17,0	1/1:35,0:35:3.74:15,4,0	0/1:35,0:34:8.14:8,0,459	0/0:29,0:27:36.26:0,36,909	0/1:23,0:21:3.78:38,0,4	1/1:14,0:14:2.65:13,3,0	0/1:27,2:29:38.65:39,0,754	0/1:13,1:13:18.61:19,0,224	0/0:21,1:22:19.20:0,19,727	0/0:26,4:30:5.25:0,5,1003	0/1:23,5:28:9.82:10,0,755	1/1:21,0:21:21.75:97,22,0	0/1:16,0:16:8.52:9,0,13	0/0:24,0:22:23.91:0,24,327	0/0:27,1:28:17.90:0,18,272	0/0:36,0:35:10.87:0,11,954	1/1:17,0:17:3.12:14,3,0	./.	./.	0/0:21,0:19:14.86:0,15,342	0/1:22,7:28:99:128,0,559	0/0:37,0:36:83.72:0,84,1292	0/0:10,0:10:24.06:0,24,353
chr10	87622800	.	CACACACACAT	C	2607.07	PASS	AB=0.892;AC=20;AF=0.357;AN=56;BaseQRankSum=7.501;DP=775;FS=19.913;HRun=0;HaplotypeScore=201.7691;InbreedingCoeff=0.5982;MQ=49.15;MQ0=28;MQRankSum=-7.463;QD=9.02;ReadPosRankSum=-1.702;VQSLOD=0.9770;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:36:20.41:20,0,751	1/1:3,5:8:6.02:190,6,0	0/1:40,0:12:23.48:23,0,250	0/0:49,0:20:21.11:0,21,407	0/0:22,0:21:14.86:0,15,330	1/1:5,21:23:29.96:637,30,0	0/1:9,28:37:1.80:193,0,2	0/0:36,0:35:78.20:0,78,1828	0/0:31,0:29:78.67:0,79,3036	1/1:9,13:20:28.31:482,28,0	1/1:3,12:14:3.01:95,3,0	0/0:34,0:34:84.18:0,84,2812	0/0:14,0:13:33.11:0,33,1075	0/0:27,0:27:69.16:0,69,2527	0/0:35,0:35:90.28:0,90,3754	0/0:27,0:27:60.19:0,60,2482	1/1:6,19:25:7.88:585,8,0	0/1:15,0:15:40.63:346,0,41	0/0:28,0:26:49.10:0,49,1137	0/0:27,0:27:30.66:0,31,918	0/0:45,0:43:99:0,114,3821	1/1:5,19:23:8.65:132,9,0	1/1:2,10:11:2.94:18,3,0	1/1:7,21:27:6.02:74,6,0	0/0:26,0:24:9.12:0,9,1095	0/0:39,0:35:85.85:0,86,2526	0/0:33,0:32:87.30:0,87,4175	0/0:13,0:13:33.05:0,33,1231
chr10	87627459	.	C	CAATCAG	509.37	PASS	AB=0.960;AC=18;AF=0.321;AN=56;BaseQRankSum=4.610;DP=510;FS=32.218;HRun=0;HaplotypeScore=278.6108;InbreedingCoeff=-0.2242;MQ=38.01;MQ0=0;MQRankSum=-6.553;QD=1.63;ReadPosRankSum=-0.463;VQSLOD=1.3306;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:26:46.96:47,0,113	0/1:10,2:12:22.99:23,0,72	0/0:5,0:3:6.02:0,6,113	0/0:13,0:10:20.15:0,20,281	0/0:18,0:18:5.75:0,6,97	1/1:14,0:14:2.97:22,3,0	0/0:20,0:20:13.26:0,13,245	0/1:27,0:27:23.70:24,0,691	0/0:24,0:24:17.14:0,17,330	0/1:36,1:35:99:101,0,1253	0/1:16,1:17:2.11:2,0,66	0/1:21,0:21:14.79:15,0,218	0/1:13,0:12:11.75:12,0,97	0/0:7,1:8:8.91:0,9,215	0/1:17,0:16:13.52:14,0,227	0/1:21,0:21:23.17:62,0,23	0/0:11,0:10:18.86:0,19,305	0/0:11,0:12:20.69:0,21,386	0/1:19,0:18:31.63:32,0,562	0/0:17,1:18:17.81:0,18,235	0/0:25,0:25:25.04:0,25,485	1/1:15,1:15:3.47:73,3,0	0/1:12,6:18:22.27:22,0,247	0/0:26,0:26:16.81:0,17,340	0/0:18,0:18:7.18:0,7,148	0/1:32,0:32:99:127,0,885	0/1:9,1:10:4.81:5,0,93	0/1:11,0:11:85.11:85,0,172
chr10	87627463	.	CAT	C	264.46	PASS	AB=0.897;AC=8;AF=0.143;AN=56;BaseQRankSum=7.257;DP=547;FS=30.247;HRun=0;HaplotypeScore=255.3657;InbreedingCoeff=0.0786;MQ=41.52;MQ0=0;MQRankSum=-6.556;QD=1.89;ReadPosRankSum=1.588;VQSLOD=1.2993;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:10.56:0,11,144	0/0:12,0:12:8.38:0,8,90	0/0:8,0:6:8.14:0,8,120	0/0:17,0:15:23.97:0,24,260	0/0:18,0:20:6:0,6,82	0/1:13,0:14:0.03:7,0,0	0/0:20,0:20:14.88:0,15,197	0/0:30,0:30:69.22:0,69,959	0/0:23,0:24:10.02:0,10,250	0/1:28,9:38:99:321,0,859	0/1:16,2:18:5.96:6,0,69	0/0:21,1:22:11.60:0,12,162	0/0:14,0:13:20.10:0,20,158	0/0:8,0:8:9.03:0,9,170	0/0:18,0:17:6.07:0,6,214	0/1:22,0:22:16.29:24,0,16	0/0:11,0:11:2.45:0,2,247	0/0:12,0:13:8.70:0,9,237	0/0:20,0:19:45.79:0,46,633	0/0:19,2:21:20.56:0,21,206	0/0:31,0:31:38.68:0,39,480	1/1:16,0:15:1.24:10,1,0	0/1:16,3:19:3.11:3,0,176	0/0:24,0:25:15.03:0,15,290	0/0:18,3:21:16.40:0,16,187	0/0:28,2:30:6.87:0,7,865	0/0:9,0:10:6.90:0,7,93	0/1:10,1:11:3.73:4,0,162
chr10	87627561	.	A	AT	252.21	PASS	AB=0.915;AC=8;AF=0.143;AN=56;BaseQRankSum=8.598;DP=639;FS=51.595;HRun=0;HaplotypeScore=187.0757;InbreedingCoeff=-0.0582;MQ=39.73;MQ0=51;MQRankSum=-7.583;QD=1.59;ReadPosRankSum=-2.423;VQSLOD=1.0287;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,2:36:48.04:0,48,614	0/0:5,1:5:7.57:0,8,87	1/1:7,0:1:0.47:1,0,0	0/0:15,0:4:6.02:0,6,79	0/0:21,0:18:3.22:0,3,44	0/0:15,0:14:17.27:0,17,212	0/0:29,0:25:49.69:0,50,661	0/0:14,0:11:33.11:0,33,457	0/1:22,2:23:41.32:41,0,397	0/1:37,1:35:14.77:15,0,839	0/0:12,1:11:15.67:0,16,206	0/0:31,3:31:72.11:0,72,953	0/0:19,1:18:9.34:0,9,440	0/0:14,0:10:17.91:0,18,249	0/0:28,2:25:33.03:0,33,458	0/0:23,1:23:33.11:0,33,457	0/0:22,0:19:51.03:0,51,641	0/0:19,0:18:50.92:0,51,624	0/0:13,0:9:23.99:0,24,289	0/0:11,1:9:11.86:0,12,165	0/0:59,0:52:61.25:0,61,866	0/0:25,1:24:19.63:0,20,285	0/0:16,1:16:11.69:0,12,166	0/0:37,0:35:42.73:0,43,523	0/1:25,2:23:77.48:77,0,100	0/1:33,2:34:91.08:91,0,746	0/1:12,1:12:11.70:12,0,309	0/1:11,4:15:99:136,0,373
chr10	87629568	.	AG	A	1891	PASS	AB=0.826;AC=19;AF=0.339;AN=56;BaseQRankSum=10.666;DP=403;FS=2.663;HRun=1;HaplotypeScore=52.1478;InbreedingCoeff=0.7771;MQ=49.13;MQ0=13;MQRankSum=-5.329;QD=13.41;ReadPosRankSum=-3.014;VQSLOD=1.5882;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,4:19:46.19:197,0,46	1/1:4,1:5:11.74:77,12,0	0/0:6,0:3:4.30:0,4,38	0/0:16,0:7:2.70:0,3,36	0/0:23,0:22:20.19:0,20,248	1/1:14,3:17:40.55:349,41,0	1/1:7,3:9:21.37:170,21,0	0/0:27,1:28:36.47:0,36,484	0/0:19,0:18:27.90:0,28,233	1/1:16,0:15:38.75:314,39,0	1/1:10,1:11:32.85:266,33,0	0/0:4,0:4:8.10:0,8,55	0/0:10,0:10:8.21:0,8,148	0/0:15,2:17:2.34:0,2,288	0/0:15,0:13:29.89:0,30,248	0/0:7,0:7:17.16:0,17,111	1/1:29,4:28:57.92:456,58,0	1/1:12,2:8:19.55:135,20,0	0/0:11,0:9:23.76:0,24,209	0/0:15,0:15:32.67:0,33,287	0/0:11,0:11:29.88:0,30,252	1/1:0,0:4:11.73:80,12,0	1/1:3,1:9:9.57:49,10,0	0/0:8,8:13:3.07:0,3,52	0/0:20,1:20:53.36:0,53,437	0/0:16,0:16:31.79:0,32,324	0/0:18,0:18:49.71:0,50,365	0/0:9,0:7:15.94:0,16,110
chr10	87629571	.	AAG	A	1681.53	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=10.196;DP=411;FS=3.617;HRun=0;HaplotypeScore=60.1877;InbreedingCoeff=0.7809;MQ=51.08;MQ0=13;MQRankSum=-2.126;QD=10.64;ReadPosRankSum=-2.120;VQSLOD=2.9253;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:99:149,0,120	1/1:5,1:6:14.84:107,15,0	0/0:6,0:3:9.03:0,9,147	0/0:17,1:8:10.12:0,10,135	0/0:23,0:22:44.87:0,45,704	1/1:16,1:17:41.19:340,41,0	1/1:10,0:9:7.20:130,7,0	0/0:29,0:29:69.69:0,70,1202	0/0:18,0:17:33.06:0,33,534	1/1:16,0:15:36.02:271,36,0	1/1:11,0:11:27.37:224,27,0	0/0:6,0:6:15.05:0,15,238	0/0:11,0:11:30.06:0,30,479	0/0:18,0:18:44.86:0,45,724	0/0:16,0:14:33.10:0,33,546	0/0:7,0:7:18.06:0,18,332	1/1:33,2:28:53.65:423,54,0	1/1:15,0:8:17.87:150,18,0	0/0:12,0:10:30.08:0,30,493	0/0:15,0:15:42.14:0,42,755	0/0:11,0:11:27.09:0,27,497	1/1:4,0:4:11.23:62,11,0	1/1:9,0:9:2.92:20,3,0	0/1:17,0:14:10.45:10,0,82	0/0:22,0:21:57.19:0,57,1021	0/0:12,0:12:36.12:0,36,664	0/0:18,0:18:51.17:0,51,895	0/0:11,0:9:24.08:0,24,413
chr10	87629572	.	AG	A	1697.45	PASS	AB=0.909;AC=20;AF=0.357;AN=56;BaseQRankSum=9.704;DP=414;FS=3.547;HRun=1;HaplotypeScore=56.0307;InbreedingCoeff=0.8031;MQ=51.60;MQ0=13;MQRankSum=-1.536;QD=10.48;ReadPosRankSum=-2.428;VQSLOD=0.7546;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,4:18:94.44:159,0,94	1/1:6,0:6:14.69:105,15,0	0/0:7,0:4:9.03:0,9,123	0/0:18,1:9:13.43:0,13,131	0/0:23,0:22:43.91:0,44,579	1/1:17,1:18:43.20:360,43,0	1/1:9,1:9:14.14:124,14,0	0/0:27,0:27:69.69:0,70,999	0/0:19,0:18:36.03:0,36,471	1/1:16,0:15:36.87:289,37,0	1/1:10,1:11:28.46:225,28,0	0/0:6,0:6:15.02:0,15,192	0/0:10,0:10:29.70:0,30,378	0/0:17,0:17:36.17:0,36,533	0/0:16,0:14:33.02:0,33,420	0/0:7,0:7:18.06:0,18,256	1/1:36,0:30:56.50:443,57,0	1/1:15,1:9:11.24:110,11,0	0/0:12,0:10:30.08:0,30,414	0/0:15,0:15:42.06:0,42,605	0/0:11,0:11:27.09:0,27,398	1/1:4,0:4:11.37:63,11,0	1/1:9,0:9:2.94:20,3,0	0/1:17,0:14:4.60:5,0,72	0/0:22,0:21:57.19:0,57,846	0/0:12,0:12:36.12:0,36,547	0/0:18,0:18:51.15:0,51,716	0/0:11,0:9:23.98:0,24,310
chr10	87630344	.	A	AC	7186.90	PASS	AB=0.583;AC=49;AF=0.875;AN=56;BaseQRankSum=-2.097;DP=490;FS=21.758;HRun=1;HaplotypeScore=215.9233;InbreedingCoeff=0.4503;MQ=66.70;MQ0=13;MQRankSum=-3.587;QD=19.48;ReadPosRankSum=4.499;VQSLOD=2.4544;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:23:38.03:399,38,0	1/1:1,2:3:8.92:80,9,0	0/0:65,0:20:36.93:0,37,355	0/0:56,0:30:39.33:0,39,391	0/1:4,9:13:24.51:87,0,25	1/1:1,13:14:39.09:416,39,0	1/1:4,19:23:36.07:363,36,0	1/1:13,16:29:71.88:790,72,0	1/1:7,6:13:26.93:240,27,0	1/1:6,12:18:33.55:482,34,0	1/1:1,6:7:0.34:98,0,0	1/1:0,11:11:32.98:316,33,0	1/1:2,9:11:27.06:279,27,0	1/1:3,14:17:39.04:396,39,0	1/1:0,14:14:33.04:333,33,0	1/1:3,9:12:24:233,24,0	1/1:3,5:8:4.98:62,5,0	1/1:0,13:13:21.05:247,21,0	1/1:6,8:13:33.01:366,33,0	1/1:5,5:10:11.48:147,11,0	0/1:3,21:24:1.39:64,0,1	1/1:3,12:15:30.04:301,30,0	1/1:3,7:10:16.82:148,17,0	1/1:4,19:23:9.83:139,10,0	0/1:4,6:10:17.48:136,0,17	1/1:7,13:20:54.14:641,54,0	1/1:1,7:8:20.85:214,21,0	1/1:1,5:6:18.05:214,18,0
chr10	87630345	.	CA	C	7237.35	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=-0.676;DP=474;FS=11.373;HRun=1;HaplotypeScore=207.4817;InbreedingCoeff=0.4517;MQ=67.56;MQ0=13;MQRankSum=-3.420;QD=20.33;ReadPosRankSum=5.113;VQSLOD=3.4008;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:41.87:387,42,0	1/1:2,1:3:8.89:76,9,0	0/0:63,0:19:35.27:0,35,385	0/0:53,1:29:37.87:0,38,411	0/1:13,0:13:31.79:125,0,32	1/1:14,0:14:39.08:400,39,0	1/1:20,0:20:36.05:348,36,0	1/1:19,7:26:61.98:799,62,0	1/1:8,3:11:21.05:234,21,0	1/1:17,1:18:28.44:479,28,0	1/1:7,0:7:0.32:114,0,0	1/1:11,0:11:32.94:303,33,0	1/1:9,2:11:27.04:269,27,0	1/1:14,2:16:39.09:423,39,0	1/1:14,0:14:33.05:341,33,0	1/1:9,3:12:24.06:267,24,0	1/1:6,1:7:10.93:91,11,0	1/1:13,0:13:18.05:216,18,0	1/1:11,1:11:30.08:355,30,0	1/1:8,2:10:16.34:188,16,0	1/1:24,0:24:2.73:63,3,0	1/1:13,1:14:30.06:310,30,0	1/1:10,0:10:13.58:156,14,0	1/1:22,1:23:0.20:144,0,0	0/1:10,0:10:15.41:132,0,15	1/1:16,4:20:49.04:607,49,0	1/1:8,0:8:20.72:204,21,0	1/1:6,0:6:18.05:207,18,0
chr10	87630348	.	AC	A	6325.19	PASS	AB=0.565;AC=50;AF=0.893;AN=56;BaseQRankSum=-1.314;DP=468;FS=7.742;HRun=1;HaplotypeScore=209.1427;InbreedingCoeff=0.4649;MQ=65.92;MQ0=13;MQRankSum=-0.572;QD=17.77;ReadPosRankSum=5.361;VQSLOD=4.6500;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:42.05:412,42,0	1/1:0,2:3:8.81:71,9,0	0/0:57,1:16:4.80:0,5,235	0/0:54,0:29:20.13:0,20,356	0/1:2,11:13:28.61:105,0,29	1/1:0,14:14:42.03:398,42,0	1/1:1,19:20:36.02:327,36,0	1/1:7,19:26:44.11:596,44,0	1/1:3,8:11:18.33:177,18,0	1/1:1,17:18:45.48:519,45,0	1/1:1,6:7:6.19:77,6,0	1/1:0,11:11:32.91:284,33,0	1/1:2,9:11:24:219,24,0	1/1:2,14:16:30.15:297,30,0	1/1:0,14:14:31.56:277,32,0	1/1:3,9:12:15.19:167,15,0	1/1:4,3:7:6.33:43,6,0	1/1:3,10:13:18.03:206,18,0	1/1:2,10:11:25.32:300,25,0	1/1:3,7:10:18.09:174,18,0	1/1:8,16:24:9.01:65,9,0	1/1:1,13:14:34.66:310,35,0	1/1:1,9:10:21.16:184,21,0	1/1:3,20:23:6.18:70,6,0	0/1:3,7:10:9.70:171,0,10	1/1:4,16:20:37.62:481,38,0	1/1:1,7:8:13.52:193,14,0	1/1:0,6:6:18.05:201,18,0
chr10	87630390	.	ACTCTC	A	890.74	PASS	AB=0.934;AC=19;AF=0.339;AN=56;BaseQRankSum=3.504;DP=370;FS=8.112;HRun=0;HaplotypeScore=197.9890;InbreedingCoeff=-0.4867;MQ=51.05;MQ0=2;MQRankSum=-3.487;QD=3.53;ReadPosRankSum=-4.606;VQSLOD=0.6259;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:8.57:9,0,505	0/1:5,3:8:99:184,0,101	0/1:17,0:6:8.16:8,0,81	0/1:7,0:6:8.62:9,0,70	0/1:12,3:15:35.72:36,0,321	0/1:14,0:14:5:5,0,384	0/1:10,0:10:10.18:57,0,10	0/1:10,0:10:21.15:21,0,205	0/0:4,0:4:9.03:0,9,151	0/1:15,2:17:99:109,0,522	0/1:4,0:4:33.92:42,0,34	0/0:12,0:12:17.81:0,18,344	0/0:4,0:3:3.01:0,3,56	0/1:14,0:14:14.36:14,0,221	0/0:9,0:9:0.56:0,1,181	0/0:13,0:13:21.07:0,21,381	0/1:9,0:9:31.81:32,0,141	0/1:12,0:12:2.90:3,0,42	0/1:11,0:10:4:4,0,153	0/1:9,3:12:99:112,0,255	0/0:30,0:30:9.70:0,10,87	0/1:14,4:18:46.80:47,0,302	0/1:16,2:18:73.88:74,0,335	0/0:22,0:22:12.45:0,12,168	0/1:16,7:23:99:268,0,655	0/0:17,0:17:21.06:0,21,582	0/1:7,0:7:5.06:5,0,209	0/0:7,0:7:15.94:0,16,269
chr10	87633968	.	T	TC	2576.24	PASS	AB=0.969;AC=23;AF=0.411;AN=56;BaseQRankSum=1.609;DP=640;FS=63.603;HRun=0;HaplotypeScore=83.1799;InbreedingCoeff=0.1116;MQ=48.76;MQ0=149;MQRankSum=1.357;QD=5.88;ReadPosRankSum=4.957;VQSLOD=0.8247;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:37:99:426,0,106	1/1:8,0:7:20.59:131,21,0	0/0:24,0:11:3.70:0,4,105	0/1:41,0:11:6.52:27,0,7	0/0:29,0:24:63.14:0,63,462	0/1:18,0:16:39.37:124,0,39	1/1:17,1:18:24.45:237,24,0	0/1:26,0:20:58.15:249,0,58	0/0:11,0:9:21.64:0,22,143	0/1:19,0:14:27.49:114,0,27	1/1:14,0:12:1.01:107,1,0	0/0:15,0:13:37.37:0,37,259	0/0:13,0:9:22.15:0,22,140	0/0:16,0:9:24.08:0,24,141	0/0:14,0:13:32.17:0,32,239	0/0:17,0:15:39.96:0,40,276	0/1:21,22:35:25.37:25,0,78	0/1:25,0:21:62.07:160,0,62	0/1:61,0:18:31.33:206,0,31	0/1:24,0:22:47.46:239,0,47	1/1:27,0:11:9.50:197,9,0	1/1:12,0:11:12.16:103,12,0	0/1:20,0:18:8.14:168,0,8	1/1:16,0:15:2.44:145,2,0	0/0:24,0:19:53.68:0,54,399	0/0:25,0:16:40.47:0,40,339	0/1:23,0:20:99:101,0,145	0/0:14,0:7:17.64:0,18,133
chr10	87635848	.	C	CTA	1183.50	PASS	AB=0.819;AC=21;AF=0.457;AN=46;BaseQRankSum=-1.763;DP=250;FS=2.422;HRun=0;HaplotypeScore=45.9828;InbreedingCoeff=0.3022;MQ=95.79;MQ0=5;MQRankSum=-1.066;QD=8.97;ReadPosRankSum=-0.983;VQSLOD=2.7627;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:5,0:5:0.89:2,1,0	0/1:30,1:16:11.76:12,0,31	0/0:61,0:30:9.83:0,10,77	0/0:7,0:7:9.03:0,9,108	1/1:8,0:8:9.03:145,9,0	1/1:3,0:3:3.01:48,3,0	1/1:8,13:21:9.16:631,9,0	0/0:3,0:3:9.03:0,9,109	0/0:3,0:3:0.47:0,0,1	./.	0/0:6,0:6:6.02:0,6,73	0/0:4,0:4:3.01:0,3,36	0/0:4,0:4:9.03:0,9,109	0/0:4,0:4:9.01:0,9,97	0/0:3,0:3:9.03:0,9,109	0/1:6,4:10:1.13:1,0,16	1/1:7,5:12:6.02:88,6,0	0/1:3,2:5:27.38:85,0,27	1/1:6,0:6:3.01:48,3,0	1/1:3,5:7:6.02:97,6,0	./.	./.	./.	0/0:7,0:7:9.03:0,9,109	1/1:5,0:7:6:51,6,0	0/1:9,0:9:19.25:39,0,19	0/1:4,0:7:21.41:84,0,21
chr10	87635864	.	ATC	A	70.36	PASS	AB=1.000;AC=12;AF=0.261;AN=46;BaseQRankSum=3.413;DP=235;FS=4.234;HRun=0;HaplotypeScore=56.1265;InbreedingCoeff=0.3714;MQ=100.45;MQ0=9;MQRankSum=-0.303;QD=0.63;ReadPosRankSum=-1.881;VQSLOD=0.8865;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,1:3:2.93:20,3,0	0/0:43,0:20:1.33:0,1,116	0/1:81,0:37:2.58:3,0,124	0/0:4,0:4:12.04:0,12,212	0/0:1,3:4:0.02:0,0,0	0/0:0,1:1:0.47:0,0,1	0/0:23,0:22:13.41:0,13,347	0/0:4,0:4:9.03:0,9,173	1/1:2,1:3:3.01:38,3,0	./.	0/0:3,0:3:6.02:0,6,115	0/0:1,0:1:3.01:0,3,58	0/0:3,0:3:9.03:0,9,164	0/0:3,0:3:9.01:0,9,139	0/0:3,0:3:9.03:0,9,173	1/1:6,2:8:11.12:76,11,0	1/1:6,0:6:5.50:38,6,0	0/0:8,0:8:0.47:0,0,152	0/0:2,1:3:3.86:0,4,22	0/0:7,0:6:6.47:0,6,51	./.	./.	./.	0/0:5,0:5:12.03:0,12,198	1/1:3,0:3:1.40:5,1,0	0/1:7,0:7:14.63:15,0,52	0/0:6,0:6:7.85:0,8,73
chr10	87635940	.	ATGTGTGTGTG	A	97.71	PASS	AC=4;AF=0.118;AN=34;BaseQRankSum=2.064;DP=62;FS=2.431;HRun=0;HaplotypeScore=22.0369;InbreedingCoeff=0.2817;MQ=51.99;MQ0=10;MQRankSum=-2.732;QD=13.96;ReadPosRankSum=1.822;VQSLOD=0.6977;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:4,0:2:6:0,6,153	0/0:2,0:2:6.02:0,6,222	./.	./.	0/0:16,0:12:30.07:0,30,1079	0/0:3,0:3:6.02:0,6,236	./.	./.	0/0:1,0:1:3.01:0,3,142	0/0:1,0:1:3.01:0,3,71	0/0:1,0:1:3.01:0,3,124	./.	0/0:1,0:1:3.01:0,3,155	1/1:0,3:3:3.01:87,3,0	1/1:3,1:3:5.05:99,5,0	0/0:6,0:4:12.03:0,12,420	0/0:2,0:2:6.01:0,6,150	0/0:3,0:3:6.02:0,6,215	./.	./.	./.	0/0:1,0:1:3:0,3,26	0/0:1,0:1:3.01:0,3,35	0/0:2,0:2:3.01:0,3,120	0/0:1,0:1:0.47:0,0,1
chr10	87636074	.	TGG	T	4044.93	PASS	AB=0.866;AC=52;AF=0.963;AN=54;BaseQRankSum=-6.391;DP=186;FS=34.643;HRun=7;HaplotypeScore=35.0575;InbreedingCoeff=-0.1019;MQ=114.94;MQ0=3;MQRankSum=-4.509;QD=21.75;ReadPosRankSum=2.487;VQSLOD=0.1097;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:9:24.08:306,24,0	1/1:0,1:1:3.01:38,3,0	0/1:25,4:20:96.04:96,0,231	0/1:24,5:23:99:141,0,251	1/1:1,3:4:12.02:139,12,0	1/1:0,5:5:12.04:152,12,0	1/1:0,5:5:9.03:115,9,0	1/1:3,12:15:36.09:442,36,0	1/1:0,4:4:9.03:115,9,0	1/1:2,4:6:15.05:188,15,0	1/1:0,3:3:9.03:115,9,0	1/1:0,2:2:3.01:38,3,0	1/1:1,1:2:5.69:49,6,0	1/1:0,2:2:6.02:76,6,0	1/1:0,5:5:9.03:115,9,0	1/1:0,3:3:9.03:115,9,0	1/1:1,4:4:9.03:115,9,0	1/1:0,2:2:6.02:76,6,0	1/1:0,5:5:15.05:191,15,0	./.	1/1:3,17:20:39.12:491,39,0	1/1:1,5:6:15.01:170,15,0	1/1:0,2:2:6.02:76,6,0	1/1:0,7:7:15.05:191,15,0	1/1:1,1:2:3.01:38,3,0	1/1:0,2:2:6.02:73,6,0	1/1:1,6:7:18.05:229,18,0	1/1:0,4:4:12.04:153,12,0
chr10	87638217	.	GA	G	2488.25	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=8.600;DP=494;FS=5.885;HRun=10;HaplotypeScore=56.6998;InbreedingCoeff=0.9937;MQ=71.98;MQ0=4;MQRankSum=-1.122;QD=16.59;ReadPosRankSum=3.171;VQSLOD=4.1548;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:73.44:0,73,794	1/1:0,7:7:18:156,18,0	0/0:29,0:17:17.98:0,18,302	0/0:40,0:27:49.39:0,49,442	0/0:17,0:17:48.13:0,48,531	1/1:3,16:19:29.99:260,30,0	1/1:3,11:14:26.99:234,27,0	0/0:42,1:43:79.22:0,79,1095	0/0:9,0:9:24.06:0,24,265	1/1:0,16:17:50.03:422,50,0	1/1:5,12:17:35.99:312,36,0	0/0:13,0:13:36.10:0,36,398	0/0:10,0:11:29.91:0,30,313	0/0:10,0:10:24.06:0,24,265	0/0:13,0:13:39.11:0,39,431	0/0:11,0:10:30.08:0,30,332	1/1:3,19:22:41.99:365,42,0	1/1:4,12:15:26.99:234,27,0	0/0:21,1:22:31.15:0,31,554	0/0:18,0:18:54.06:0,54,581	0/0:7,0:7:18.05:0,18,199	1/1:1,7:8:17.99:156,18,0	1/1:3,12:15:32.60:284,33,0	1/1:2,13:15:32.99:286,33,0	0/0:12,0:12:30.08:0,30,332	0/0:30,0:30:61.22:0,61,901	0/0:12,0:12:33.09:0,33,365	0/0:15,0:15:36.02:0,36,371
chr10	87639029	.	C	CTG	377.94	PASS	AB=0.966;AC=20;AF=0.435;AN=46;BaseQRankSum=-2.309;DP=457;FS=1.186;HRun=0;HaplotypeScore=85.1521;InbreedingCoeff=-0.0095;MQ=72.15;MQ0=8;MQRankSum=-0.148;QD=1.44;ReadPosRankSum=0.421;VQSLOD=1.7760;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:30:8.68:85,0,9	1/1:5,0:5:2.22:7,2,0	./.	./.	0/0:11,0:11:3:0,3,27	0/0:24,0:24:3.15:0,3,12	0/0:28,0:27:2.45:0,2,23	./.	0/1:16,2:17:43.30:73,0,43	0/1:14,0:14:3.69:47,0,4	0/0:7,0:7:1.95:0,2,6	0/1:9,0:9:0:0,0,0	0/1:13,0:13:0:0,0,0	0/1:10,1:11:25.60:38,0,26	0/1:8,2:10:51.16:75,0,51	1/1:13,3:19:3.01:44,3,0	0/1:15,1:16:22.96:35,0,23	0/0:13,0:13:1.86:0,2,20	./.	./.	0/1:35,0:39:9.27:9,0,47	0/1:14,0:14:0:0,0,0	0/0:7,0:7:3.01:0,3,32	0/0:27,0:27:8.12:0,8,44	1/1:23,0:23:3.01:41,3,0	0/1:18,0:18:0:0,0,0	1/1:9,0:9:5.89:39,6,0	0/1:13,0:12:0.01:0,0,0
chr10	87639077	.	GTGTGTC	G	1064.76	PASS	AB=0.913;AC=15;AF=0.268;AN=56;BaseQRankSum=2.929;DP=550;FS=13.019;HRun=0;HaplotypeScore=125.8580;InbreedingCoeff=0.4777;MQ=53.20;MQ0=17;MQRankSum=0.478;QD=5.82;ReadPosRankSum=-1.167;VQSLOD=1.7530;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:47.35:0,47,635	1/1:15,0:14:5.49:144,5,0	0/0:21,0:8:7.22:0,7,116	0/0:19,0:4:8.90:0,9,69	0/0:20,0:20:44.99:0,45,726	0/0:22,0:20:2.96:0,3,19	1/1:24,0:22:12.34:213,12,0	0/0:25,0:22:59.85:0,60,507	0/0:13,0:12:30.05:0,30,593	0/1:18,0:18:99:121,0,257	0/1:11,0:10:54.57:80,0,55	0/0:16,0:16:32.82:0,33,413	0/0:16,0:16:32.15:0,32,284	0/0:15,0:15:35.99:0,36,497	0/0:20,0:20:36.40:0,36,584	0/0:17,0:17:26.99:0,27,340	0/1:24,0:24:99:151,0,408	1/1:11,0:11:23.60:171,24,0	0/0:13,0:11:26.87:0,27,220	0/0:14,0:14:35.58:0,36,329	0/0:45,0:41:68.25:0,68,890	0/1:4,14:18:0:1,0,0	1/1:5,14:19:0.01:1,0,0	1/1:29,1:30:38.52:306,39,0	0/0:16,0:16:21.01:0,21,302	0/0:18,0:18:51.02:0,51,582	0/1:13,0:13:41.89:42,0,89	0/0:11,0:11:26.92:0,27,255
chr10	87639081	.	GTC	G	1403.73	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=3.726;DP=549;FS=9.743;HRun=0;HaplotypeScore=96.7946;InbreedingCoeff=0.6584;MQ=53.96;MQ0=16;MQRankSum=0.158;QD=7.55;ReadPosRankSum=-0.482;VQSLOD=2.5190;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:45.37:0,45,586	1/1:15,1:15:26.94:218,27,0	0/0:21,0:8:7.24:0,7,116	0/0:22,0:7:7.88:0,8,79	0/0:20,0:20:44.50:0,45,400	1/1:4,17:19:3.01:46,3,0	0/1:25,0:23:2.36:239,0,2	0/0:27,0:24:68.78:0,69,588	0/0:14,0:13:25.33:0,25,280	1/1:18,0:18:21.04:271,21,0	0/1:10,0:10:2.28:104,0,2	0/0:16,0:16:35.72:0,36,278	0/0:16,0:16:31.72:0,32,237	0/0:15,0:15:38.98:0,39,370	0/0:19,0:19:41.88:0,42,417	0/0:16,0:16:26.94:0,27,234	1/1:24,1:25:13.22:288,13,0	1/1:11,0:11:5.65:137,6,0	0/0:14,0:12:29.77:0,30,248	0/0:14,0:14:38.51:0,39,302	0/0:40,0:36:21.77:0,22,508	0/1:17,0:17:0:1,0,0	0/0:18,0:18:2.75:0,3,43	1/1:30,0:30:19.60:269,20,0	0/0:14,0:14:2.86:0,3,188	0/0:21,0:21:33.04:0,33,448	0/1:13,0:13:6.48:6,0,110	0/0:11,0:11:26.65:0,27,199
chr10	87640414	.	C	CTT	1190.81	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=2.640;DP=363;FS=1.948;HRun=8;HaplotypeScore=66.1524;InbreedingCoeff=0.6257;MQ=76.13;MQ0=6;MQRankSum=-2.972;QD=21.26;ReadPosRankSum=-0.222;VQSLOD=2.2200;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:33.05:0,33,356	1/1:0,3:3:9.03:130,9,0	0/0:25,0:13:25.77:0,26,246	0/0:33,0:15:28.44:0,28,259	0/0:14,0:14:33.56:0,34,368	0/0:5,0:5:12.03:0,12,134	0/0:15,0:15:39.03:0,39,418	0/0:21,0:21:42.03:0,42,468	0/0:20,0:20:51.11:0,51,558	1/1:3,10:13:34.65:503,35,0	1/1:3,6:9:24.04:330,24,0	0/0:14,0:14:38.94:0,39,434	0/1:9,0:9:27.92:28,0,119	0/0:5,0:5:8.86:0,9,100	0/0:14,0:14:29.81:0,30,334	0/0:11,0:11:21:0,21,219	1/1:2,10:11:24.03:352,24,0	0/1:10,0:10:8.37:8,0,119	0/0:15,0:15:42.11:0,42,468	0/0:13,0:13:36.10:0,36,401	0/0:11,0:10:6:0,6,67	0/0:2,0:2:3:0,3,33	0/0:8,0:8:8.94:0,9,85	0/0:11,0:10:12.90:0,13,126	0/0:16,0:16:33.05:0,33,356	0/0:13,0:13:33.07:0,33,361	0/0:9,0:9:12.03:0,12,134	0/0:9,0:9:1.88:0,2,149
chr10	87640439	.	TTC	T	2270.42	PASS	AB=0.945;AC=30;AF=0.536;AN=56;BaseQRankSum=2.311;DP=395;FS=15.999;HRun=0;HaplotypeScore=55.5571;InbreedingCoeff=0.4718;MQ=58.31;MQ0=17;MQRankSum=-0.495;QD=9.54;ReadPosRankSum=-5.642;VQSLOD=0.3800;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,2:17:40.72:351,41,0	1/1:4,0:4:11.92:91,12,0	0/0:44,0:7:15.39:0,15,94	0/1:52,0:20:5.60:6,0,96	0/0:16,0:16:20.94:0,21,399	0/1:5,0:5:14.12:14,0,38	0/0:13,0:13:35.58:0,36,323	1/1:19,0:19:48.91:351,49,0	0/0:19,0:19:25.27:0,25,462	1/1:11,0:11:29.75:246,30,0	1/1:10,0:10:18.42:150,18,0	0/0:13,0:13:35.82:0,36,345	0/1:7,0:6:3.36:3,0,99	0/0:9,0:9:10.29:0,10,82	0/0:16,0:16:30.42:0,30,345	0/0:10,0:10:6.93:0,7,215	1/1:14,0:13:22.53:154,23,0	0/1:13,0:13:1.66:2,0,146	1/1:15,0:12:35.90:299,36,0	1/1:3,9:12:29.75:219,30,0	0/1:2,7:8:2.25:40,0,2	0/1:2,0:2:11.85:17,0,12	0/1:9,0:7:28.21:28,0,91	0/1:10,0:9:37.67:38,0,78	0/0:17,0:17:25.58:0,26,367	1/1:2,13:15:43.62:384,44,0	1/1:9,0:8:2.97:20,3,0	1/1:4,0:4:9.72:55,10,0
chr10	87640577	.	GCCACCA	G	1009.27	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.158;DP=368;FS=22.574;HRun=0;HaplotypeScore=82.8117;InbreedingCoeff=0.6182;MQ=78.45;MQ0=0;MQRankSum=-5.894;QD=43.88;ReadPosRankSum=-1.064;VQSLOD=1.6414;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,16:23:51.13:1104,51,0	0/0:3,0:3:9.02:0,9,234	0/0:15,0:15:36.12:0,36,1145	0/0:18,0:18:36.39:0,36,941	0/0:4,0:5:12.04:0,12,363	0/0:9,0:9:12.04:0,12,415	0/0:15,0:15:36.12:0,36,1180	0/0:8,0:8:21.07:0,21,727	0/0:23,0:23:66.23:0,66,2262	0/0:10,0:10:27.09:0,27,913	0/0:4,0:4:12.04:0,12,416	0/0:20,0:20:51.18:0,51,1743	0/0:10,0:10:30.10:0,30,1039	0/0:12,0:12:27.08:0,27,833	0/0:15,0:15:36.12:0,36,1231	0/0:8,0:8:21.07:0,21,728	0/0:25,0:25:75.26:0,75,2583	0/0:9,0:9:18.06:0,18,623	0/0:14,0:14:33.11:0,33,1098	0/0:3,0:3:6.02:0,6,208	0/0:32,0:32:79.50:0,79,2565	0/0:1,0:1:3.01:0,3,103	0/0:2,0:2:5.98:0,6,124	0/0:31,0:31:11.71:0,12,1715	0/0:14,0:14:39.09:0,39,1117	0/0:19,0:19:45.15:0,45,1534	0/0:12,0:12:36.11:0,36,1106	0/0:8,0:8:24.08:0,24,829
chr10	87640613	.	T	TTTTTGTTTTG	4277.17	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=-0.057;DP=446;FS=0.675;HRun=0;HaplotypeScore=130.9562;InbreedingCoeff=0.9196;MQ=62.17;MQ0=2;MQRankSum=-8.601;QD=58.59;ReadPosRankSum=-2.866;VQSLOD=4.2645;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:29:34.84:0,35,827	./.	0/0:13,0:8:6.02:0,6,136	0/0:13,0:11:14.99:0,15,342	0/0:11,0:11:15.04:0,15,345	1/1:6,8:14:27.09:1232,27,0	1/1:10,6:16:21.07:1002,21,0	0/0:20,0:20:24.08:0,24,711	0/0:22,0:22:42.09:0,42,1012	0/0:20,0:20:33.09:0,33,794	0/0:8,0:8:24.08:0,24,641	0/0:18,0:18:30.10:0,30,899	0/0:14,0:14:30.09:0,30,787	0/0:11,0:11:30.06:0,30,829	0/0:14,0:14:30.08:0,30,728	0/0:11,0:11:27.05:0,27,702	0/0:27,0:27:51.16:0,51,1432	1/1:6,4:12:15.05:732,15,0	0/0:28,0:27:27.06:0,27,686	0/0:8,0:8:17.95:0,18,523	0/0:38,0:38:84.27:0,84,2391	1/1:3,0:3:6.02:203,6,0	1/1:3,0:3:6.01:171,6,0	1/1:12,11:25:24.08:937,24,0	0/0:13,0:13:24.08:0,24,719	0/0:27,0:27:57.18:0,57,1644	0/0:15,0:15:33.11:0,33,947	0/0:11,0:11:27.09:0,27,790
chr10	87640788	.	AGGCT	A	2654.30	PASS	AB=0.936;AC=22;AF=0.393;AN=56;BaseQRankSum=-3.613;DP=503;FS=8.211;HRun=0;HaplotypeScore=117.4264;InbreedingCoeff=0.0858;MQ=66.65;MQ0=0;MQRankSum=-1.458;QD=7.69;ReadPosRankSum=2.201;VQSLOD=1.4482;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,10:25:11.97:188,12,0	0/1:9,0:9:33.97:34,0,61	0/1:18,0:15:3.76:4,0,393	0/0:24,0:21:22.06:0,22,350	0/0:19,0:19:18.06:0,18,413	0/1:21,0:19:49.91:138,0,50	1/1:14,0:14:19.78:207,20,0	1/1:32,0:31:33.68:534,34,0	0/0:15,0:15:33.11:0,33,735	0/1:19,0:19:99:136,0,103	0/1:18,0:18:15.09:60,0,15	0/0:19,0:19:48.15:0,48,1076	0/0:18,0:18:42.14:0,42,982	0/0:12,0:12:30.10:0,30,649	0/0:12,0:12:33.11:0,33,736	0/0:7,0:7:15.05:0,15,347	0/1:40,0:40:99:303,0,298	0/1:15,0:14:2.79:300,0,3	0/1:20,0:20:90.10:161,0,90	0/1:17,0:17:61.89:62,0,187	0/1:30,0:30:99:352,0,137	0/1:3,11:14:0.39:0,0,0	1/1:9,0:9:12.04:153,12,0	0/1:2,11:13:0:0,0,0	0/0:22,0:22:45.15:0,45,991	0/1:18,0:18:77.16:77,0,139	0/0:10,0:10:20.13:0,20,169	0/1:12,0:12:66.34:121,0,66
chr10	87640841	.	ATC	A	1258.44	PASS	AB=0.812;AC=10;AF=0.185;AN=54;BaseQRankSum=3.024;DP=465;FS=14.273;HRun=0;HaplotypeScore=91.9708;InbreedingCoeff=0.3749;MQ=64.38;MQ0=11;MQRankSum=-0.248;QD=13.11;ReadPosRankSum=-1.115;VQSLOD=1.8265;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:57.11:0,57,964	0/0:6,0:6:11.99:0,12,102	0/0:22,0:9:0.71:0,1,107	0/0:19,0:10:14.75:0,15,152	0/0:14,0:14:33.11:0,33,584	1/1:13,14:22:11.67:512,12,0	0/1:5,5:10:55.01:158,0,55	0/0:29,0:26:78.09:0,78,1205	0/0:15,0:15:45.14:0,45,814	0/1:19,0:19:91:91,0,293	0/1:15,0:15:82.83:84,0,83	0/0:16,0:16:45.14:0,45,796	0/0:17,0:17:48.10:0,48,710	0/0:10,0:10:24.08:0,24,443	0/0:15,0:15:45.12:0,45,811	0/0:13,0:13:39.13:0,39,732	0/0:34,0:34:42.17:0,42,510	0/1:5,13:17:11.86:422,0,12	0/0:25,0:25:72.17:0,72,1208	0/0:21,0:21:59.67:0,60,1034	0/0:12,0:12:36.11:0,36,639	./.	1/1:1,1:2:3.01:46,3,0	1/1:4,1:5:6.02:90,6,0	0/0:23,0:23:69.22:0,69,1274	0/0:24,0:23:72.21:0,72,1267	0/0:20,0:20:60.01:0,60,1078	0/0:6,0:6:18.04:0,18,313
chr10	87640843	.	C	CTA	2915.01	PASS	AB=0.894;AC=18;AF=0.333;AN=54;BaseQRankSum=3.557;DP=460;FS=1.633;HRun=0;HaplotypeScore=87.5927;InbreedingCoeff=0.7641;MQ=64.73;MQ0=10;MQRankSum=0.961;QD=18.45;ReadPosRankSum=2.363;VQSLOD=3.8339;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:57.13:0,57,699	1/1:0,6:6:12.04:202,12,0	0/1:20,0:9:4.21:4,0,47	0/0:19,0:10:7.68:0,8,56	0/0:14,0:14:30.10:0,30,386	0/1:19,7:21:0.35:316,0,0	1/1:10,0:10:2.12:57,2,0	0/0:30,0:28:60.14:0,60,747	0/0:15,0:15:42.14:0,42,539	1/1:2,18:20:54.18:881,54,0	1/1:3,12:15:30.10:504,30,0	0/0:15,0:15:42.14:0,42,540	0/0:16,0:16:33.10:0,33,417	0/0:8,0:8:24.08:0,24,309	0/0:16,0:16:45.10:0,45,547	0/0:13,0:13:39.11:0,39,488	1/1:5,29:35:57.19:957,57,0	1/1:18,0:18:3.43:89,3,0	0/0:24,0:24:69.21:0,69,861	0/0:21,0:21:54.16:0,54,680	0/0:12,0:12:33.11:0,33,423	./.	1/1:2,0:2:2.94:18,3,0	1/1:3,1:4:6.01:68,6,0	0/0:23,0:23:66.20:0,66,834	0/0:23,1:23:13.18:0,13,720	0/0:20,0:20:57.16:0,57,716	0/0:6,0:6:15.05:0,15,193
chr10	87643719	.	C	CGTGTGT	2949.87	PASS	AB=0.833;AC=26;AF=0.542;AN=48;BaseQRankSum=-0.939;DP=666;FS=6.933;HRun=0;HaplotypeScore=168.1281;InbreedingCoeff=0.7257;MQ=63.88;MQ0=12;MQRankSum=1.267;QD=8.31;ReadPosRankSum=-3.308;VQSLOD=1.2771;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:35:18.04:422,18,0	1/1:7,0:11:3.01:39,3,0	./.	./.	0/0:21,0:21:18.06:0,18,364	1/1:27,0:26:12.04:339,12,0	1/1:22,0:21:15.46:235,15,0	0/1:32,0:30:0:0,0,0	0/1:13,0:26:20.46:20,0,111	1/1:25,7:35:33.06:676,33,0	1/1:6,6:16:9.03:116,9,0	0/0:25,0:26:29.90:0,30,525	0/0:10,0:10:15.05:0,15,291	0/0:21,0:21:20.98:0,21,425	0/0:26,0:26:11.76:0,12,243	0/0:21,0:24:27.97:0,28,512	1/1:14,6:22:9.03:213,9,0	1/1:8,0:17:3.01:78,3,0	0/0:11,0:15:9.03:0,9,116	0/0:11,0:24:9.03:0,9,126	./.	1/1:20,0:25:6.02:149,6,0	1/1:15,0:15:15.02:277,15,0	1/1:23,0:38:1.80:5,2,0	0/0:26,0:31:26.81:0,27,471	1/1:17,0:30:48.01:561,48,0	0/0:12,0:19:11.95:0,12,143	./.
chr10	87643907	.	C	CCATT	6432.61	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-9.129;DP=548;FS=3.238;HRun=0;HaplotypeScore=89.2811;InbreedingCoeff=0.9975;MQ=90.67;MQ0=0;MQRankSum=-5.332;QD=63.06;ReadPosRankSum=1.002;VQSLOD=6.8174;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,108,1961	0/0:9,0:9:24.08:0,24,448	0/0:23,0:23:54.14:0,54,889	0/0:23,0:23:54.16:0,54,914	0/0:16,0:16:39.13:0,39,724	1/1:1,8:9:18.06:438,18,0	1/1:3,22:25:72.25:1868,72,0	0/0:26,0:26:72.21:0,72,1229	0/0:22,0:22:66.23:0,66,1232	0/0:18,0:18:54.19:0,54,1008	0/0:9,0:8:27.09:0,27,504	0/0:21,0:21:57.20:0,57,1063	0/0:11,0:11:33.11:0,33,616	0/0:23,0:23:63.21:0,63,1137	0/0:20,0:20:54.19:0,54,1005	0/0:21,0:21:63.22:0,63,1176	0/0:21,1:22:63.20:0,63,1144	1/1:2,13:15:39.09:980,39,0	0/0:22,0:22:63.22:0,63,1171	0/0:16,0:16:45.15:0,45,820	0/0:28,0:28:72.25:0,72,1332	1/1:3,9:14:33.07:802,33,0	1/1:4,8:12:33.07:782,33,0	1/1:3,22:25:60.21:1563,60,0	0/0:19,0:19:53.96:0,54,974	0/0:18,0:18:54.18:0,54,979	0/0:27,0:27:75.26:0,75,1397	0/0:12,0:12:36.12:0,36,672
chr10	87644228	.	AGTGTGTGT	A	235.45	PASS	AB=0.907;AC=10;AF=0.200;AN=50;BaseQRankSum=2.541;DP=611;FS=3.381;HRun=0;HaplotypeScore=168.5642;InbreedingCoeff=0.1223;MQ=69.56;MQ0=11;MQRankSum=-2.922;QD=1.41;ReadPosRankSum=-0.744;VQSLOD=2.7265;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:40,8:46:18.48:69,0,18	0/0:10,0:10:12.04:0,12,464	./.	./.	0/0:11,0:11:8.96:0,9,299	0/0:16,0:20:2.97:0,3,43	0/1:23,1:25:36.90:66,0,37	1/1:17,0:17:1.30:66,1,0	0/0:19,0:19:27.56:0,28,776	0/0:26,0:26:33.10:0,33,934	0/0:9,0:10:2.97:0,3,122	0/0:18,1:23:41.91:0,42,1364	0/0:14,0:14:21.07:0,21,646	0/0:14,0:14:21.07:0,21,667	0/0:16,0:19:30.10:0,30,1003	0/0:18,0:18:30.05:0,30,983	0/0:47,0:49:93.05:0,93,2803	0/1:12,1:14:35.08:78,0,35	0/0:12,0:14:5.99:0,6,49	1/1:13,0:15:0.47:1,0,0	0/0:32,0:35:18:0,18,190	0/0:15,5:20:3.01:0,3,43	1/1:12,0:16:0.07:0,0,0	0/1:31,0:31:35.05:68,0,35	0/0:18,0:20:27.09:0,27,913	0/0:23,0:22:27.06:0,27,464	0/0:23,0:31:10.80:0,11,216	./.
chr10	87645015	.	TCTACCTCTGA	T	5982.14	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.006;DP=423;FS=5.607;HRun=0;HaplotypeScore=125.8573;InbreedingCoeff=0.9641;MQ=89.16;MQ0=0;MQRankSum=-12.643;QD=62.97;ReadPosRankSum=-0.448;VQSLOD=3.8699;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:63.22:1991,63,0	0/0:5,0:5:15.05:0,15,747	0/0:25,0:25:74.75:0,75,3121	0/0:18,0:18:51.18:0,51,2135	0/0:12,0:12:30.10:0,30,1375	1/1:0,13:13:29.97:836,30,0	1/1:1,18:19:45.15:1460,45,0	0/0:29,0:29:78.25:0,78,3706	0/0:9,0:9:27.09:0,27,1441	0/0:22,0:22:63.22:0,63,3294	0/0:12,0:12:36.12:0,36,1660	0/0:9,0:9:27.08:0,27,1303	0/0:14,0:14:39.12:0,39,1858	0/0:9,0:9:27.09:0,27,1348	0/0:23,0:23:66.21:0,66,3366	0/0:10,0:10:24.08:0,24,1281	0/0:31,0:31:90.31:0,90,4659	1/1:0,12:12:30.03:918,30,0	0/0:15,0:15:45.12:0,45,1910	0/0:7,0:7:21.07:0,21,1100	0/0:22,0:22:63.22:0,63,3248	1/1:0,4:5:12.04:397,12,0	1/1:1,6:7:11.89:198,12,0	1/1:0,10:10:6.02:182,6,0	0/0:12,0:12:36.11:0,36,1722	0/0:10,0:10:30.10:0,30,1242	0/0:18,0:18:54.19:0,54,2632	0/0:16,0:16:48.16:0,48,2489
chr10	87645272	.	T	TTTTG	8897.73	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=3.465;DP=759;FS=6.529;HRun=0;HaplotypeScore=159.5680;InbreedingCoeff=0.9973;MQ=69.12;MQ0=1;MQRankSum=-7.369;QD=27.98;ReadPosRankSum=-1.487;VQSLOD=3.6487;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,3:56:81.70:1305,82,0	1/1:1,14:15:36.12:874,36,0	0/0:41,0:38:36.12:0,36,544	0/0:30,0:29:35.73:0,36,545	0/0:18,0:18:36.12:0,36,586	1/1:18,0:27:32.60:500,33,0	1/1:26,0:33:43.52:618,44,0	0/0:38,0:38:66.23:0,66,1071	0/0:27,0:27:66.17:0,66,1052	1/1:16,26:43:90.25:1952,90,0	1/1:12,11:27:39.13:898,39,0	0/0:28,0:28:57.18:0,57,902	0/0:14,0:14:24.07:0,24,365	0/0:18,0:18:42.14:0,42,684	0/0:29,0:29:48.16:0,48,759	0/0:25,0:25:51.15:0,51,780	1/1:5,20:25:51.17:1238,51,0	1/1:13,0:18:17.95:279,18,0	0/0:21,0:21:33.09:0,33,491	0/0:23,0:23:45.15:0,45,727	0/0:48,0:48:99:0,105,1687	1/1:15,0:23:32.68:379,33,0	1/1:13,1:21:33.10:521,33,0	1/1:25,0:30:24.06:335,24,0	0/0:14,0:14:21.07:0,21,342	0/0:24,0:24:51.16:0,51,787	0/0:26,0:26:57.19:0,57,913	0/0:17,0:17:30.10:0,30,488
chr10	87647611	.	GAT	G	5644.23	PASS	AB=1.000;AC=48;AF=0.960;AN=50;BaseQRankSum=-1.049;DP=201;FS=13.625;HRun=0;HaplotypeScore=33.3443;InbreedingCoeff=-0.1001;MQ=47.32;MQ0=1;MQRankSum=-3.195;QD=28.36;ReadPosRankSum=3.949;VQSLOD=4.7026;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:24.08:353,24,0	1/1:0,1:1:3.01:44,3,0	0/1:18,0:14:99:118,0,165	0/1:16,0:9:44.29:93,0,44	1/1:0,6:6:9.03:132,9,0	1/1:1,8:9:21.07:309,21,0	1/1:1,12:12:30.10:441,30,0	1/1:3,20:22:60.20:880,60,0	1/1:0,7:7:12.04:176,12,0	1/1:0,5:5:12.04:173,12,0	1/1:0,3:3:6.02:88,6,0	1/1:0,5:5:15.05:221,15,0	1/1:0,5:5:12.04:176,12,0	./.	1/1:0,8:8:18.06:265,18,0	1/1:0,9:9:27.09:388,27,0	1/1:2,10:12:18.06:265,18,0	1/1:1,3:4:9.03:132,9,0	1/1:3,8:11:24.06:331,24,0	1/1:0,1:1:3.01:44,3,0	1/1:1,1:2:3.01:44,3,0	./.	1/1:0,1:1:3.01:44,3,0	1/1:1,3:4:6.02:88,6,0	1/1:0,8:8:21.07:309,21,0	1/1:1,11:12:33.11:486,33,0	1/1:0,4:4:3.01:44,3,0	./.
chr10	87650559	.	T	TA	3703.39	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.832;DP=551;FS=1.368;HRun=4;HaplotypeScore=50.0108;InbreedingCoeff=0.9724;MQ=77.62;MQ0=0;MQRankSum=-3.267;QD=34.29;ReadPosRankSum=2.551;VQSLOD=4.1486;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1120	0/0:13,0:13:39.11:0,39,441	0/0:17,0:16:34.29:0,34,336	0/0:13,0:12:5.94:0,6,179	0/0:17,0:17:44.69:0,45,467	1/1:2,21:23:63.21:856,63,0	1/1:1,15:16:30.10:408,30,0	0/0:19,0:19:54.13:0,54,590	0/0:22,0:22:57.15:0,57,638	0/0:18,0:18:54.14:0,54,603	0/0:19,0:19:48.10:0,48,517	0/0:18,0:18:54.13:0,54,595	0/0:28,0:28:81.23:0,81,918	0/0:23,0:23:66.19:0,66,747	0/0:16,0:16:42.12:0,42,475	0/0:17,0:17:48.11:0,48,527	0/0:22,0:22:60.16:0,60,669	1/1:1,20:22:51.17:688,51,0	0/0:27,0:27:69.15:0,69,748	0/0:21,0:21:60.17:0,60,680	0/0:21,0:21:60.14:0,60,659	1/1:1,14:15:42.14:571,42,0	1/1:1,19:20:57.19:773,57,0	1/1:0,12:12:30.10:408,30,0	0/0:24,0:24:66.15:0,66,713	0/0:25,0:25:75.21:0,75,841	0/0:23,0:23:66.09:0,66,719	0/0:6,0:6:12.03:0,12,136
chr10	87650800	.	T	TA	1963.06	PASS	AB=0.923;AC=13;AF=0.232;AN=56;BaseQRankSum=-4.624;DP=469;FS=3.617;HRun=11;HaplotypeScore=57.4956;InbreedingCoeff=0.8587;MQ=70.47;MQ0=0;MQRankSum=-0.314;QD=18.70;ReadPosRankSum=-0.055;VQSLOD=4.6251;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,122,942	0/0:11,0:11:32.86:0,33,253	0/1:11,1:11:24.17:24,0,37	0/0:13,0:10:4.91:0,5,76	0/0:16,0:16:38.53:0,39,298	1/1:2,20:22:60.12:609,60,0	1/1:5,17:23:30.84:451,31,0	0/0:26,0:26:62.74:0,63,486	0/0:10,0:10:23.90:0,24,186	0/0:17,0:17:38.81:0,39,301	0/0:9,0:9:23.91:0,24,186	0/0:17,0:17:38.78:0,39,302	0/0:6,0:6:17.93:0,18,139	0/0:12,0:12:26.86:0,27,209	0/0:14,0:14:35.84:0,36,276	0/0:9,0:10:25.94:0,26,192	0/0:30,0:30:57.88:0,58,469	1/1:5,22:27:60.12:609,60,0	0/0:24,0:26:60.74:0,61,442	0/0:13,0:13:29.81:0,30,226	0/0:11,0:11:26.87:0,27,209	1/1:0,4:4:9.02:91,9,0	1/1:2,7:9:18.04:183,18,0	1/1:0,8:8:18.04:183,18,0	0/0:13,0:14:37.90:0,38,285	0/0:22,0:22:43.95:0,44,325	0/0:27,0:27:68.73:0,69,534	0/0:13,0:13:23.79:0,24,182
chr10	87651016	.	CAG	C	1215.76	PASS	AB=1.000;AC=24;AF=0.480;AN=50;BaseQRankSum=0.147;DP=1054;FS=1.351;HRun=0;HaplotypeScore=76.3830;InbreedingCoeff=0.1132;MQ=24.09;MQ0=415;MQRankSum=3.273;QD=1.46;ReadPosRankSum=-2.746;VQSLOD=0.6514;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:54,0:20:23.52:181,24,0	0/0:12,0:1:0.47:0,0,1	./.	./.	0/0:24,5:15:5.90:0,6,38	1/1:40,0:17:5.59:43,6,0	0/1:62,0:17:6.02:6,0,6	0/0:15,0:8:5.70:0,6,61	0/1:42,0:16:19.11:19,0,96	0/0:35,0:5:2.98:0,3,21	./.	0/1:43,0:22:23.22:23,0,123	0/1:32,0:13:5.58:6,0,7	0/0:22,0:10:8.51:0,9,54	0/1:47,0:19:25.38:25,0,123	0/1:45,0:14:12.98:13,0,55	0/0:32,0:11:13.91:0,14,97	1/1:44,0:12:4.99:74,5,0	0/1:29,0:6:34.16:34,0,58	1/1:26,0:12:20.91:169,21,0	1/1:145,0:61:50.87:496,51,0	0/0:16,7:10:0.44:0,0,1	1/1:25,0:12:5.84:47,6,0	0/1:83,0:40:0.26:0,0,1	0/0:41,0:19:8.92:0,9,111	0/1:46,0:14:72.47:79,0,72	1/1:22,0:11:15.10:104,15,0	0/1:47,0:15:33.54:48,0,34
chr10	87651092	.	TA	T	1993.70	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.910;DP=463;FS=1.771;HRun=2;HaplotypeScore=66.3121;InbreedingCoeff=0.9838;MQ=60.89;MQ0=12;MQRankSum=-0.958;QD=32.16;ReadPosRankSum=-0.707;VQSLOD=3.1897;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:32:96.25:0,96,1362	1/1:0,4:4:12.04:155,12,0	0/0:21,0:17:48.14:0,48,681	0/0:25,0:18:48.11:0,48,661	0/0:11,0:11:23.43:0,23,357	0/0:10,0:10:23.38:0,23,322	0/0:15,0:15:42.12:0,42,594	0/0:23,0:23:69.19:0,69,993	0/0:17,0:16:38.43:0,38,582	1/1:0,16:16:48.16:623,48,0	1/1:1,10:12:33.09:412,33,0	0/0:12,0:10:27.09:0,27,405	0/0:10,0:9:24.08:0,24,359	0/0:8,0:8:24.08:0,24,359	0/0:14,0:14:42.14:0,42,616	0/0:13,0:13:31.97:0,32,493	1/1:3,27:27:75.24:961,75,0	0/0:11,0:10:30.06:0,30,422	0/0:8,0:8:24.04:0,24,334	0/0:16,0:16:46.38:0,46,656	0/0:51,0:47:99:0,132,1945	0/0:12,0:11:29.85:0,30,371	0/0:9,0:9:27.09:0,27,404	0/0:19,0:17:47.55:0,48,717	0/0:7,0:6:16.30:0,16,228	0/0:26,1:26:36.29:0,36,1037	0/0:15,0:15:42.09:0,42,584	0/0:11,0:11:33.11:0,33,493
chr10	87651806	.	G	GT	1014.47	PASS	AB=0.914;AC=35;AF=0.625;AN=56;BaseQRankSum=0.146;DP=469;FS=4.098;HRun=14;HaplotypeScore=99.7926;InbreedingCoeff=0.2379;MQ=48.74;MQ0=7;MQRankSum=-2.170;QD=2.86;ReadPosRankSum=-2.249;VQSLOD=0.3502;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:24:19.72:91,20,0	1/1:8,2:8:3:27,3,0	0/0:33,0:11:5.58:0,6,24	0/0:23,0:4:2.32:0,2,9	0/1:13,1:13:5.36:5,0,9	0/0:10,0:9:0.11:0,0,2	0/1:11,0:11:0.13:26,0,0	1/1:20,9:28:6.25:108,6,0	1/1:11,0:11:9.50:50,10,0	1/1:17,1:18:12.36:94,12,0	1/1:9,1:11:12.88:79,13,0	0/1:12,1:13:7.93:21,0,8	0/0:7,0:6:5.93:0,6,34	0/0:15,0:15:12.35:0,12,76	0/0:9,0:10:6.35:0,6,34	0/1:8,3:10:34.25:34,0,37	1/1:24,2:26:8.87:119,9,0	1/1:17,0:15:0.41:15,0,0	0/1:19,2:19:7.74:115,0,8	1/1:15,1:14:14.86:107,15,0	1/1:8,0:8:0.94:2,1,0	1/1:7,0:6:2.90:17,3,0	1/1:12,0:12:1.26:11,1,0	1/1:17,0:17:1.54:11,2,0	0/1:18,0:19:16.51:17,0,30	0/1:27,4:29:45.73:46,0,81	1/1:18,5:21:14:178,14,0	0/0:15,1:15:15.47:0,15,83
chr10	87651819	.	TTC	T	2395.43	PASS	AB=0.977;AC=36;AF=0.643;AN=56;BaseQRankSum=-1.014;DP=443;FS=6.567;HRun=0;HaplotypeScore=88.3870;InbreedingCoeff=-0.2568;MQ=43.61;MQ0=8;MQRankSum=-0.559;QD=5.79;ReadPosRankSum=-6.722;VQSLOD=-0.2045;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:5.38:120,5,0	0/1:10,0:7:4.28:19,0,4	0/1:27,1:9:9.52:10,0,56	0/0:18,0:2:2.90:0,3,16	1/1:14,1:14:12.85:192,13,0	1/1:6,1:6:15.83:123,16,0	1/1:12,0:12:23.44:169,23,0	0/1:23,0:22:58.80:59,0,71	0/1:10,1:10:5.31:76,0,5	0/1:16,0:13:29.39:33,0,29	1/1:11,1:11:26.38:175,26,0	0/1:17,2:18:3.16:216,0,3	0/1:9,0:8:29.19:29,0,29	0/1:16,0:16:47.66:113,0,48	0/1:9,1:10:7.04:70,0,7	0/1:12,0:11:9.55:56,0,10	0/1:24,0:22:33.11:54,0,33	1/1:21,2:19:13.37:229,13,0	0/1:21,0:19:52.46:83,0,52	0/0:11,0:9:16.48:0,16,72	1/1:6,0:6:2.45:55,2,0	1/1:8,0:7:11.88:85,12,0	1/1:9,1:10:14.86:133,15,0	1/1:16,0:16:16.68:148,17,0	0/1:17,0:17:45.43:74,0,45	0/1:26,0:21:60.35:81,0,60	0/1:23,0:21:14.28:113,0,14	0/1:14,1:13:34.80:44,0,35
chr10	87651820	.	TC	T	4358.25	PASS	AB=0.964;AC=53;AF=0.946;AN=56;BaseQRankSum=-1.065;DP=430;FS=2.004;HRun=1;HaplotypeScore=78.3987;InbreedingCoeff=0.2937;MQ=43.38;MQ0=8;MQRankSum=-0.900;QD=10.58;ReadPosRankSum=-1.874;VQSLOD=2.2187;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:25:40.86:257,41,0	1/1:10,0:7:10.14:63,10,0	0/1:26,1:9:50.56:51,0,52	0/0:18,0:2:1.25:0,1,3	1/1:14,1:14:34.47:241,34,0	1/1:8,0:7:20.85:154,21,0	1/1:11,0:11:23.29:152,23,0	1/1:23,0:22:45.41:229,45,0	1/1:11,0:10:25.31:167,25,0	1/1:14,1:12:25.20:140,25,0	1/1:11,0:10:26.57:174,27,0	1/1:16,1:16:33.32:246,33,0	1/1:8,0:7:11.81:85,12,0	1/1:14,2:16:25.25:232,25,0	1/1:9,1:10:16.50:114,17,0	1/1:11,2:12:26.67:178,27,0	1/1:23,0:21:34.22:195,34,0	1/1:18,3:17:34.49:244,34,0	1/1:19,1:18:40.78:200,41,0	1/1:11,0:9:9.98:33,10,0	1/1:5,1:6:13.57:92,14,0	1/1:7,0:6:11.81:81,12,0	1/1:5,5:10:14.85:104,15,0	1/1:11,2:13:16.97:119,17,0	1/1:12,4:16:30.02:177,30,0	1/1:26,0:21:35.57:226,36,0	1/1:23,0:21:48.33:304,48,0	1/1:15,0:13:16.25:99,16,0
chr10	87651871	.	TAG	T	1172.79	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.495;DP=349;FS=0.000;HRun=0;HaplotypeScore=107.9172;InbreedingCoeff=0.8636;MQ=57.76;MQ0=7;MQRankSum=-6.673;QD=30.86;ReadPosRankSum=0.116;VQSLOD=5.4614;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:48.16:0,48,974	0/0:5,0:4:6.02:0,6,122	0/0:31,0:7:11.61:0,12,73	0/0:30,0:8:8.45:0,8,40	0/0:6,0:5:12.04:0,12,244	0/0:7,0:7:21.07:0,21,425	0/0:20,0:20:51.17:0,51,995	1/1:0,3:3:9.03:138,9,0	0/0:8,0:7:18.06:0,18,364	0/0:18,0:13:30.10:0,30,609	0/0:5,0:5:12.04:0,12,242	0/0:13,0:12:33.11:0,33,647	0/0:13,0:13:36.12:0,36,729	0/0:6,0:6:18.06:0,18,365	0/0:11,0:11:27.09:0,27,547	0/0:11,0:10:24.08:0,24,487	0/0:22,0:20:33.11:0,33,669	0/0:23,0:20:54.19:0,54,1097	1/1:0,5:4:12.04:184,12,0	1/1:0,11:10:30.10:451,30,0	1/1:0,8:8:18.02:239,18,0	0/0:14,0:13:33.11:0,33,651	0/0:6,0:6:6.02:0,6,121	0/0:12,0:12:24.08:0,24,487	0/0:8,0:8:18.06:0,18,366	0/0:18,0:14:39.13:0,39,792	1/1:0,10:9:21.07:319,21,0	1/1:0,0:1:2.84:14,3,0
chr10	87652073	.	GA	G	2354.30	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=3.311;DP=221;FS=1.873;HRun=3;HaplotypeScore=103.7513;InbreedingCoeff=0.2881;MQ=69.34;MQ0=0;MQRankSum=-4.181;QD=10.95;ReadPosRankSum=3.791;VQSLOD=1.8009;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:31.64:175,32,0	1/1:0,5:5:13.95:65,14,0	0/0:5,0:6:1.30:0,1,39	0/1:8,0:8:8.80:11,0,9	1/1:1,4:5:9.63:47,10,0	1/1:1,4:5:14.31:77,14,0	1/1:3,6:9:17.89:94,18,0	1/1:6,11:17:32.20:201,32,0	1/1:1,3:4:8.73:48,9,0	1/1:1,10:11:22.41:127,22,0	1/1:1,9:10:25.28:129,25,0	1/1:0,8:8:22.84:118,23,0	1/1:2,2:4:5.78:31,6,0	1/1:0,6:6:17.47:111,17,0	1/1:1,9:10:23.17:140,23,0	1/1:1,8:9:20.10:114,20,0	1/1:2,6:8:11.21:55,11,0	1/1:2,4:6:11.65:67,12,0	1/1:2,6:8:17.80:127,18,0	1/1:6,9:15:28.53:147,29,0	1/1:3,3:6:5.72:33,6,0	1/1:0,6:6:16.97:83,17,0	1/1:3,6:9:14.23:79,14,0	1/1:2,7:9:14.09:70,14,0	1/1:0,6:6:16.91:83,17,0	1/1:3,6:8:14.75:99,15,0	1/1:0,4:4:8.70:54,9,0	1/1:0,4:4:11.61:66,12,0
chr10	87652077	.	G	GTGT	8201.40	PASS	AB=1.000;AC=54;AF=0.964;AN=56;BaseQRankSum=-0.323;DP=194;FS=19.514;HRun=0;HaplotypeScore=97.0952;InbreedingCoeff=-0.0380;MQ=68.00;MQ0=0;MQRankSum=-2.361;QD=42.28;ReadPosRankSum=3.403;VQSLOD=4.8849;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:33.11:578,33,0	1/1:0,5:5:15.05:248,15,0	0/1:6,0:6:13.60:14,0,34	0/1:6,0:6:22.05:65,0,22	1/1:1,4:5:13.86:200,14,0	1/1:0,4:4:12.04:203,12,0	1/1:1,6:7:21.07:345,21,0	1/1:8,11:19:41.12:665,41,0	1/1:0,3:3:9.03:158,9,0	1/1:1,10:11:24.08:421,24,0	1/1:0,9:9:27.09:457,27,0	1/1:0,8:8:24.08:411,24,0	1/1:0,2:2:6.02:104,6,0	1/1:0,6:6:18.06:331,18,0	1/1:0,9:9:24.08:433,24,0	1/1:0,8:8:21.07:370,21,0	1/1:0,6:6:12.04:201,12,0	1/1:0,4:4:12.04:214,12,0	1/1:0,6:6:18.06:348,18,0	1/1:2,9:11:30.10:512,30,0	1/1:3,3:6:0.84:99,1,0	1/1:0,6:6:18.06:302,18,0	1/1:0,6:6:15.05:262,15,0	1/1:1,7:8:18.06:302,18,0	1/1:0,6:6:18.06:302,18,0	1/1:0,6:5:15.05:283,15,0	1/1:0,4:4:9.03:163,9,0	1/1:0,4:4:12.04:212,12,0
chr10	87652100	.	A	AG	2706.37	PASS	AC=50;AF=1.000;AN=50;DP=119;FS=0.000;HRun=2;HaplotypeScore=75.8254;InbreedingCoeff=-0.0461;MQ=28.41;MQ0=0;QD=23.13;VQSLOD=3.3834;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,6:8:11.74:71,12,0	1/1:1,3:4:11.88:101,12,0	./.	./.	1/1:1,3:4:6.02:72,6,0	1/1:0,4:4:11.87:108,12,0	1/1:2,2:4:11.87:111,12,0	1/1:3,12:15:42.07:571,42,0	1/1:0,3:3:8.79:52,9,0	1/1:3,6:9:15.05:215,15,0	1/1:0,4:4:11.85:106,12,0	1/1:0,7:7:20.66:158,21,0	1/1:0,2:2:5.85:34,6,0	1/1:0,3:3:8.86:70,9,0	1/1:0,6:6:14.71:104,15,0	1/1:2,2:4:11.83:91,12,0	1/1:0,5:5:12.04:160,12,0	./.	1/1:0,2:2:6.02:85,6,0	1/1:2,5:7:20.65:147,21,0	1/1:0,5:5:8.94:90,9,0	1/1:0,3:3:6.90:75,7,0	1/1:1,2:3:8.78:52,9,0	1/1:1,2:3:2.92:17,3,0	1/1:1,2:3:8.94:91,9,0	1/1:0,4:3:9.03:127,9,0	1/1:2,1:3:2.97:20,3,0	1/1:0,2:2:5.95:55,6,0
chr10	87652498	.	C	CT	2367.43	PASS	AB=0.800;AC=14;AF=0.250;AN=56;BaseQRankSum=-1.832;DP=545;FS=3.989;HRun=10;HaplotypeScore=67.6044;InbreedingCoeff=0.8110;MQ=55.78;MQ0=24;MQRankSum=-0.216;QD=13.23;ReadPosRankSum=0.868;VQSLOD=3.7527;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:29:51.42:267,51,0	0/0:5,0:5:14.98:0,15,123	0/0:15,0:10:9.60:0,10,80	0/0:6,0:5:8.90:0,9,71	0/1:15,0:15:1.92:2,0,188	1/1:1,13:17:44.78:444,45,0	1/1:13,10:24:38.34:345,38,0	0/0:35,0:33:67.72:0,68,531	0/0:14,0:14:34.99:0,35,277	0/0:22,0:23:58.01:0,58,455	0/0:14,0:14:32.96:0,33,271	0/0:21,0:20:18.88:0,19,233	0/0:17,0:18:49.97:0,50,397	0/0:16,0:16:41.93:0,42,342	0/0:14,1:15:6.97:0,7,264	0/0:7,0:7:17.98:0,18,148	0/0:31,0:33:86.87:0,87,670	1/1:10,23:28:63.09:649,63,0	0/0:22,0:20:35.90:0,36,291	0/0:20,0:20:50.94:0,51,419	0/0:15,0:15:26.95:0,27,222	0/1:7,14:21:10.07:272,0,10	1/1:5,8:12:15.04:160,15,0	1/1:9,17:21:39.10:416,39,0	0/0:18,0:18:32.92:0,33,271	0/0:29,1:29:48.92:0,49,600	0/0:25,0:24:53.36:0,53,526	0/0:10,0:10:26.97:0,27,222
chr10	87652618	.	G	GGTGT	3458.80	PASS	AB=0.913;AC=30;AF=0.556;AN=54;BaseQRankSum=-0.701;DP=594;FS=1.920;HRun=0;HaplotypeScore=127.7019;InbreedingCoeff=0.5034;MQ=60.02;MQ0=10;MQRankSum=-4.882;QD=8.82;ReadPosRankSum=-3.631;VQSLOD=2.2351;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,1:38:8.82:201,9,0	1/1:0,0:13:9.03:155,9,0	0/0:33,0:13:5.99:0,6,95	0/1:43,0:25:25.65:26,0,35	0/0:14,0:14:30.09:0,30,456	1/1:17,0:16:2.97:50,3,0	1/1:26,0:26:8.77:98,9,0	0/1:23,5:31:18:330,0,18	0/0:24,0:24:57.17:0,57,863	1/1:4,1:22:14.69:274,15,0	1/1:0,0:12:6.02:103,6,0	0/0:18,0:18:39.07:0,39,616	0/0:10,0:9:14.96:0,15,209	0/0:19,0:19:21.07:0,21,336	0/1:23,0:23:4.75:5,0,534	0/0:15,0:18:42.11:0,42,583	1/1:5,0:28:15.02:242,15,0	1/1:8,1:15:3.01:52,3,0	0/1:10,2:11:32.97:235,0,33	1/1:6,5:11:12.04:288,12,0	1/1:29,24:55:5.90:1116,6,0	./.	1/1:11,0:9:2.99:24,3,0	1/1:17,0:17:2.90:64,3,0	0/0:15,0:16:30.09:0,30,430	0/0:29,0:32:2.53:0,3,631	1/1:10,2:14:8.65:196,9,0	0/0:4,0:5:15.04:0,15,220
chr10	87653012	.	TTTTC	T	5646.03	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.337;DP=656;FS=3.424;HRun=0;HaplotypeScore=112.3697;InbreedingCoeff=0.9997;MQ=82.02;MQ0=0;MQRankSum=0.355;QD=42.13;ReadPosRankSum=1.975;VQSLOD=5.2783;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:50:99:0,144,3681	0/0:17,0:17:51.18:0,51,1303	0/0:23,0:23:60.21:0,60,1425	0/0:20,0:20:48.15:0,48,1097	0/0:28,0:28:81.27:0,81,2022	1/1:1,16:17:45.11:786,45,0	1/1:5,23:28:57.19:1025,57,0	0/0:19,0:19:45.13:0,45,1126	0/0:21,0:21:63.22:0,63,1623	0/0:36,0:36:99:0,99,2592	0/0:10,0:10:29.97:0,30,691	0/0:29,0:29:84.29:0,84,2167	0/0:20,0:20:60.21:0,60,1570	0/0:18,0:18:54.18:0,54,1358	0/0:19,0:19:57.19:0,57,1407	0/0:20,0:20:57.20:0,57,1466	0/0:39,0:39:99:0,105,2749	1/1:1,14:15:36.08:621,36,0	0/0:11,0:11:30.09:0,30,680	0/0:24,0:24:69.23:0,69,1744	0/0:29,0:29:81.26:0,81,1995	1/1:1,24:25:63.17:1114,63,0	1/1:1,21:22:57.15:1005,57,0	1/1:3,24:27:60.21:1095,60,0	0/0:11,0:11:33.11:0,33,858	0/0:35,0:35:93.32:0,93,2302	0/0:29,0:29:84.28:0,84,2143	0/0:13,0:13:39.12:0,39,967
chr10	87654213	.	GT	G	1924.24	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.633;DP=675;FS=5.832;HRun=7;HaplotypeScore=66.8467;InbreedingCoeff=0.9975;MQ=80.55;MQ0=0;MQRankSum=-1.214;QD=24.99;ReadPosRankSum=0.443;VQSLOD=4.2698;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,1:43:89.83:0,90,1402	1/1:2,7:9:18.04:184,18,0	0/0:29,0:26:51.44:0,51,589	0/0:22,0:22:42.15:0,42,506	0/0:26,0:26:75.21:0,75,906	0/0:17,0:17:51.16:0,51,642	0/0:22,0:22:45.07:0,45,511	0/0:33,0:33:78.24:0,78,966	0/0:21,0:21:60.17:0,60,729	1/1:2,24:26:72.11:713,72,0	1/1:1,15:16:45.09:453,45,0	0/0:22,0:22:66.20:0,66,817	0/0:21,0:21:60.17:0,60,730	0/0:21,0:21:57.15:0,57,685	0/0:24,0:24:69.21:0,69,855	0/0:24,1:25:38.61:0,39,800	1/1:1,25:26:72.16:734,72,0	0/0:13,0:13:36.06:0,36,421	0/0:14,0:14:36.10:0,36,430	0/0:37,0:37:99:0,111,1362	0/0:27,0:27:78.22:0,78,950	0/0:31,0:31:93.30:0,93,1170	0/0:28,0:28:75.23:0,75,928	0/0:34,0:34:96.29:0,96,1183	0/0:26,0:26:66.20:0,66,818	0/0:25,0:25:69.20:0,69,845	0/0:26,0:26:75.20:0,75,905	0/0:10,0:10:30.10:0,30,377
chr10	87655653	.	T	TG	12737.89	PASS	AB=0.919;AC=23;AF=0.411;AN=56;BaseQRankSum=-17.277;DP=714;FS=4.115;HRun=0;HaplotypeScore=63.5382;InbreedingCoeff=0.9262;MQ=82.85;MQ0=0;MQRankSum=-2.014;QD=39.56;ReadPosRankSum=4.165;VQSLOD=5.4867;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,46:46:99:2062,129,0	1/1:0,11:11:33.11:528,33,0	0/0:25,0:24:69.14:0,69,910	0/0:21,0:21:57.15:0,57,753	0/0:19,0:19:54.18:0,54,754	1/1:0,37:37:99:1775,111,0	1/1:1,26:27:69.24:1103,69,0	0/0:27,0:27:75.23:0,75,1016	0/0:31,0:31:93.29:0,93,1282	1/1:1,26:27:78.22:1197,78,0	1/1:0,23:23:60.20:958,60,0	0/0:18,0:18:51.17:0,51,713	0/0:19,0:19:54.17:0,54,736	0/0:18,0:18:54.18:0,54,753	0/0:33,0:33:99:0,99,1366	0/0:27,0:27:81.27:0,81,1133	1/1:2,25:27:69.24:1103,69,0	1/1:2,19:21:57.19:901,57,0	0/0:33,0:33:96.30:0,96,1302	0/0:22,0:22:66.21:0,66,906	0/0:35,0:35:99:0,105,1469	1/1:0,32:32:96.33:1535,96,0	1/1:1,12:13:36.12:576,36,0	1/1:0,24:24:60.20:959,60,0	0/0:16,0:15:48.16:0,48,671	0/1:31,3:34:41.63:42,0,1198	0/0:30,0:30:87.29:0,87,1214	0/0:18,0:18:51.17:0,51,708
chr10	87656050	.	TTGTC	T	8305.81	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.092;DP=710;FS=1.973;HRun=0;HaplotypeScore=119.5594;InbreedingCoeff=0.9908;MQ=73.71;MQ0=1;MQRankSum=-3.784;QD=32.57;ReadPosRankSum=5.227;VQSLOD=4.9679;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,42:48:96.33:1621,96,0	1/1:0,4:4:12.04:203,12,0	0/0:25,0:25:38.15:0,38,772	0/0:26,0:24:41.77:0,42,903	0/0:18,0:18:42.14:0,42,1001	1/1:4,13:17:36.12:608,36,0	1/1:4,22:26:51.17:861,51,0	0/0:32,0:32:69.23:0,69,1640	0/0:29,0:29:69.24:0,69,1678	1/1:9,14:22:33.11:557,33,0	1/1:5,12:17:27.09:456,27,0	0/0:22,0:22:51.16:0,51,1193	0/0:18,0:18:42.13:0,42,969	0/0:22,0:22:63.20:0,63,1517	0/0:32,0:32:84.27:0,84,2040	0/0:29,0:29:69.24:0,69,1691	1/1:8,27:35:60.21:1013,60,0	1/1:6,18:24:45.15:760,45,0	0/0:34,0:34:63.21:0,63,1467	0/0:16,0:16:39.12:0,39,866	0/0:69,0:69:99:0,175,4176	1/1:5,11:16:30.10:506,30,0	1/1:2,11:13:33.11:557,33,0	1/1:5,27:32:69.24:1165,69,0	0/0:14,0:14:39.13:0,39,938	0/0:29,0:29:66.23:0,66,1589	0/0:32,0:32:69.24:0,69,1686	0/0:8,0:8:12.04:0,12,299
chr10	87656262	.	CT	C	3731.08	PASS	AC=22;AF=0.423;AN=52;BaseQRankSum=7.251;DP=590;FS=6.304;HRun=10;HaplotypeScore=68.1415;InbreedingCoeff=0.9632;MQ=54.35;MQ0=35;MQRankSum=0.097;QD=15.88;ReadPosRankSum=5.934;VQSLOD=3.9924;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:9,31:39:74.96:651,75,0	1/1:4,3:7:11.97:99,12,0	./.	0/0:17,1:7:1.25:0,1,3	0/0:30,0:27:52:0,52,547	1/1:6,11:15:23.89:252,24,0	1/1:4,17:20:47.99:416,48,0	0/0:33,1:30:28.02:0,28,497	0/0:13,0:12:23.97:0,24,231	1/1:8,13:19:35.86:309,36,0	1/1:5,8:13:23.99:208,24,0	0/0:19,0:19:47.93:0,48,487	0/0:14,0:14:24.04:0,24,249	0/0:14,0:14:23.82:0,24,224	0/0:23,0:23:48.12:0,48,524	0/0:19,0:18:32.88:0,33,332	1/1:13,22:30:38.47:563,38,0	1/1:9,16:22:45.54:368,46,0	0/0:21,0:21:44.12:0,44,397	0/0:28,0:28:40.09:0,40,462	0/0:19,0:14:16.76:0,17,133	1/1:6,10:16:26.95:233,27,0	1/1:4,11:15:32.98:286,33,0	1/1:9,15:23:14.67:347,15,0	0/0:15,0:14:31.87:0,32,318	0/0:29,1:30:37.09:0,37,626	0/0:30,0:29:63.08:0,63,652	./.
chr10	87657015	.	T	TAAA	1760.80	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=8.459;DP=372;FS=2.574;HRun=0;HaplotypeScore=80.1324;InbreedingCoeff=0.7821;MQ=55.67;MQ0=31;MQRankSum=-8.299;QD=17.61;ReadPosRankSum=0.232;VQSLOD=3.4878;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:12:53.64:116,0,54	1/1:4,0:4:12.02:116,12,0	0/0:28,0:9:19.27:0,19,220	0/1:17,0:2:11.62:12,0,15	0/0:20,0:20:39.13:0,39,689	1/1:0,3:4:9.03:165,9,0	1/1:1,3:3:9.03:165,9,0	0/0:37,0:36:99:0,102,1768	0/0:8,0:8:24.08:0,24,427	1/1:9,0:8:24:229,24,0	1/1:16,1:16:39.51:334,40,0	0/0:10,0:10:21.01:0,21,369	0/0:10,0:9:24.08:0,24,429	0/0:10,0:10:24.06:0,24,438	0/0:12,0:12:30.09:0,30,519	0/0:15,0:12:24.06:0,24,397	1/1:12,0:9:23.42:223,23,0	1/1:3,5:6:15.05:304,15,0	0/0:13,0:12:36.07:0,36,553	0/0:18,0:16:45.11:0,45,777	0/0:12,0:10:27.05:0,27,441	1/1:1,4:4:11.91:144,12,0	1/1:0,3:3:2.98:53,3,0	1/1:2,0:2:6.02:107,6,0	0/0:14,0:13:31.91:0,32,539	0/0:22,0:21:35.62:0,36,857	0/0:19,0:18:42.59:0,43,714	0/0:23,0:20:42.14:0,42,763
chr10	87657016	.	T	TAA	1787.82	PASS	AB=0.875;AC=21;AF=0.375;AN=56;BaseQRankSum=9.220;DP=370;FS=1.878;HRun=1;HaplotypeScore=73.4430;InbreedingCoeff=0.8025;MQ=55.28;MQ0=33;MQRankSum=-8.889;QD=22.07;ReadPosRankSum=-0.133;VQSLOD=1.6201;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:11:13.02:226,0,13	1/1:4,0:4:12.04:207,12,0	0/0:29,0:9:18.39:0,18,180	0/0:16,0:2:4.98:0,5,24	0/0:20,0:20:39.07:0,39,537	1/1:3,0:3:8.34:38,8,0	1/1:4,0:3:8.38:40,8,0	0/0:38,0:37:99:0,99,1385	0/0:8,0:8:24.04:0,24,329	1/1:9,0:8:24.08:389,24,0	1/1:13,4:16:41.88:585,42,0	0/0:10,0:10:20.56:0,21,273	0/0:10,0:9:24.06:0,24,327	0/0:10,0:10:24.55:0,25,349	0/0:11,0:11:30.07:0,30,430	0/0:13,0:12:21.03:0,21,277	1/1:12,0:9:8.94:343,9,0	1/1:8,0:5:14.50:81,15,0	0/0:14,0:14:36.08:0,36,462	0/0:18,0:16:44.93:0,45,602	0/0:11,0:9:24.06:0,24,330	1/1:4,0:3:5.96:25,6,0	1/1:4,0:3:2.74:12,3,0	1/1:2,0:2:5.80:42,6,0	0/0:13,0:13:31.32:0,31,412	0/0:22,0:21:9.63:0,10,674	0/0:18,0:17:39.02:0,39,565	0/0:23,0:20:42.12:0,42,587
chr10	87659065	.	T	TAC	5624.61	PASS	AB=1.000;AC=19;AF=0.352;AN=54;BaseQRankSum=-1.851;DP=637;FS=1.704;HRun=0;HaplotypeScore=85.7522;InbreedingCoeff=0.8557;MQ=62.67;MQ0=3;MQRankSum=2.321;QD=25.45;ReadPosRankSum=3.601;VQSLOD=5.6781;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:33.09:0,33,413	1/1:6,0:6:14.99:132,15,0	./.	0/0:18,0:9:2.82:0,3,32	0/0:38,0:38:84.06:0,84,1042	1/1:3,20:23:45.14:739,45,0	1/1:2,22:25:45.15:765,45,0	0/0:31,0:31:75.21:0,75,927	0/0:26,0:25:66.12:0,66,768	0/1:30,0:29:99:281,0,121	1/1:29,0:28:4.38:361,4,0	0/0:20,0:20:51.11:0,51,604	0/0:18,0:18:45.07:0,45,510	0/0:19,0:19:51.11:0,51,604	0/0:31,0:31:90.24:0,90,1123	0/0:17,0:17:42.11:0,42,517	1/1:19,0:19:8.21:365,8,0	1/1:5,10:15:42.03:618,42,0	0/0:19,0:19:36.08:0,36,427	0/0:28,0:28:66.17:0,66,814	0/0:19,0:19:45.12:0,45,555	1/1:5,18:23:39.12:636,39,0	1/1:5,25:29:66.23:1117,66,0	1/1:3,18:20:36.12:612,36,0	0/0:21,0:21:54.04:0,54,673	0/0:32,0:32:87.22:0,87,1042	0/0:31,0:31:90.19:0,90,1064	0/0:23,0:23:62.88:0,63,769
chr10	87659073	.	C	CAT	4999.72	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=2.684;DP=648;FS=4.520;HRun=0;HaplotypeScore=91.3835;InbreedingCoeff=0.9492;MQ=65.44;MQ0=3;MQRankSum=2.737;QD=22.32;ReadPosRankSum=4.335;VQSLOD=5.0777;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:13.06:0,13,351	1/1:0,6:6:15.05:250,15,0	1/1:10,0:3:0.47:1,0,0	0/0:24,0:14:7.73:0,8,54	0/0:35,0:35:77.99:0,78,956	1/1:21,0:21:42:374,42,0	1/1:24,0:24:24.15:361,24,0	0/0:39,0:39:99:0,99,1133	0/0:27,0:26:60.14:0,60,708	1/1:7,23:29:66.15:967,66,0	1/1:4,22:26:48.16:802,48,0	0/0:23,0:23:63.06:0,63,710	0/0:18,0:18:45.11:0,45,531	0/0:19,0:19:39.12:0,39,496	0/0:31,0:31:87.24:0,87,1063	0/0:16,0:16:39.10:0,39,468	1/1:2,22:24:48.16:802,48,0	1/1:16,0:16:9.25:264,9,0	0/0:20,0:20:48.06:0,48,533	0/0:24,0:24:63.17:0,63,772	0/0:18,0:18:51.12:0,51,605	1/1:19,0:19:36:325,36,0	1/1:29,0:28:23.39:533,23,0	1/1:18,0:17:36.01:320,36,0	0/0:23,0:23:51.03:0,51,621	0/0:34,0:34:84.09:0,84,993	0/0:30,0:30:75.20:0,75,910	0/0:23,0:23:62.87:0,63,779
chr10	87659129	.	A	AAC	3128.85	PASS	AB=0.833;AC=13;AF=0.232;AN=56;BaseQRankSum=-3.387;DP=596;FS=0.449;HRun=0;HaplotypeScore=86.9796;InbreedingCoeff=0.4913;MQ=63.84;MQ0=7;MQRankSum=2.058;QD=16.64;ReadPosRankSum=1.220;VQSLOD=3.4803;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,2:32:66.01:610,66,0	0/0:7,0:7:18.04:0,18,198	0/0:30,0:15:17.72:0,18,173	0/0:23,0:18:20.27:0,20,220	0/0:29,0:29:47.76:0,48,515	0/1:12,7:19:53.35:293,0,53	1/1:9,11:20:4.48:525,4,0	0/0:34,0:34:24.50:0,24,257	0/0:17,0:18:41.92:0,42,450	0/0:15,0:15:33.10:0,33,381	0/0:22,0:22:38.67:0,39,411	0/0:20,0:20:39.10:0,39,440	0/0:16,0:17:41.93:0,42,444	0/0:22,0:22:51.14:0,51,579	0/0:17,0:17:44.94:0,45,481	0/0:16,0:16:39.12:0,39,450	0/1:21,1:23:10.70:11,0,324	1/1:3,15:19:39.13:606,39,0	0/1:18,0:20:12.35:12,0,194	0/0:22,0:23:41.96:0,42,464	0/0:25,0:26:30.05:0,30,608	0/1:7,5:12:5.12:249,0,5	1/1:8,12:19:10.50:608,11,0	0/1:15,7:21:67.80:384,0,68	0/0:20,0:20:41.91:0,42,442	0/0:33,0:35:77.89:0,78,859	0/0:18,0:18:48.14:0,48,554	0/0:12,0:13:26.91:0,27,291
chr10	87659530	.	TA	T	1858.33	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=7.934;DP=526;FS=2.071;HRun=10;HaplotypeScore=54.4212;InbreedingCoeff=0.9006;MQ=63.91;MQ0=0;MQRankSum=1.206;QD=17.05;ReadPosRankSum=1.035;VQSLOD=4.2177;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:90.03:0,90,956	0/0:5,0:5:12.03:0,12,133	0/0:7,1:7:8.99:0,9,80	0/0:19,0:16:27.04:0,27,281	0/0:23,0:23:66.11:0,66,700	1/1:1,16:17:35.92:304,36,0	1/1:2,15:17:38.99:338,39,0	0/0:27,0:27:34.49:0,34,597	0/0:19,0:19:48.13:0,48,531	0/0:31,0:31:66.15:0,66,715	0/0:19,1:20:37.63:0,38,539	0/0:16,0:16:42.11:0,42,462	0/1:8,0:8:6.47:6,0,87	0/0:17,0:17:45.07:0,45,483	0/0:20,0:20:51.12:0,51,555	0/0:17,0:17:45.11:0,45,489	0/0:27,0:27:69.17:0,69,754	1/1:0,16:16:35.99:312,36,0	0/0:19,0:19:54.06:0,54,570	0/0:27,0:27:72.19:0,72,789	0/0:12,0:12:30.08:0,30,332	1/1:1,16:17:44.94:384,45,0	1/1:2,12:14:32.99:286,33,0	1/1:0,20:20:47.99:417,48,0	0/0:19,0:22:62.82:0,63,645	0/0:23,0:23:51.10:0,51,545	0/0:16,0:16:39.09:0,39,422	0/0:12,0:12:36.10:0,36,398
chr10	87660054	.	CAT	C	1714.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.636;DP=590;FS=0.632;HRun=0;HaplotypeScore=75.3677;InbreedingCoeff=0.8367;MQ=94.88;MQ0=0;MQRankSum=-4.494;QD=41.81;ReadPosRankSum=1.481;VQSLOD=5.4090;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:41:99:1809,111,0	0/0:5,0:5:15.05:0,15,292	0/0:39,0:39:99:0,117,2309	0/0:27,0:27:78.26:0,78,1491	0/0:11,0:11:30.10:0,30,609	0/0:23,0:23:66.21:0,66,1304	0/0:22,0:22:66.21:0,66,1290	0/0:28,0:28:81.28:0,81,1639	0/0:25,0:25:75.24:0,75,1476	0/0:34,0:34:99:0,102,1921	0/0:8,0:8:24.07:0,24,431	0/0:26,0:26:78.25:0,78,1548	0/0:10,0:10:30.10:0,30,609	0/0:28,0:28:84.27:0,84,1667	0/0:30,0:30:90.31:0,90,1817	0/0:13,0:13:39.13:0,39,792	0/0:33,0:33:99:0,99,1864	0/0:24,0:24:72.25:0,72,1463	0/0:15,0:15:45.15:0,45,880	0/0:11,0:11:33.11:0,33,670	0/0:22,0:22:66.21:0,66,1302	0/0:13,0:13:39.12:0,39,756	0/0:13,0:13:39.13:0,39,791	0/0:28,0:28:84.27:0,84,1668	0/0:11,0:11:33.11:0,33,670	0/0:26,0:26:78.27:0,78,1579	0/0:23,0:23:69.22:0,69,1363	0/0:1,0:1:3.01:0,3,61
chr10	87660879	.	CT	C	1765.11	PASS	AB=0.719;AC=26;AF=0.464;AN=56;BaseQRankSum=5.503;DP=489;FS=21.952;HRun=15;HaplotypeScore=75.2918;InbreedingCoeff=0.3940;MQ=66.15;MQ0=5;MQRankSum=-0.423;QD=5.83;ReadPosRankSum=1.649;VQSLOD=0.8151;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,13:31:2.15:241,0,2	1/1:2,0:5:6.26:17,6,0	0/0:23,0:8:7.57:0,8,40	0/0:18,0:12:1.40:0,1,33	0/0:13,1:20:10.04:0,10,178	1/1:10,9:22:4:233,4,0	1/1:15,7:23:8.66:132,9,0	0/1:18,8:27:11.12:146,0,11	0/0:16,0:16:29.91:0,30,244	1/1:7,0:14:15.15:47,15,0	1/1:10,1:19:22.52:75,23,0	0/0:20,0:20:36.73:0,37,299	0/0:14,0:14:35.48:0,35,271	0/0:11,1:12:23.98:0,24,204	0/0:13,1:17:13.54:0,14,224	0/1:13,2:16:5.76:6,0,175	1/1:14,0:24:30.67:99,31,0	0/1:9,5:14:5.48:93,0,5	0/1:10,14:26:25.38:210,0,25	1/1:5,5:10:15.24:97,15,0	0/1:6,8:15:23.41:78,0,23	0/1:3,1:4:17.43:29,0,17	1/1:6,8:14:33.22:205,33,0	1/1:16,8:23:32.74:201,33,0	0/0:13,0:14:36.22:0,36,286	0/0:12,0:24:34.68:0,35,187	0/1:6,9:15:11.88:50,0,12	0/0:3,0:8:11.52:0,12,69
chr10	87660902	.	TC	T	3986.32	PASS	AC=22;AF=0.407;AN=54;BaseQRankSum=8.110;DP=416;FS=16.203;HRun=2;HaplotypeScore=56.7302;InbreedingCoeff=0.9529;MQ=50.95;MQ0=10;MQRankSum=-3.398;QD=23.73;ReadPosRankSum=4.937;VQSLOD=2.0968;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:31:63.13:767,63,0	1/1:0,6:6:15.05:192,15,0	./.	0/0:6,0:1:2.84:0,3,14	0/0:15,0:15:33.07:0,33,419	1/1:1,19:20:33.11:424,33,0	1/1:0,16:16:27.08:338,27,0	0/0:24,0:22:62.48:0,62,645	0/0:15,0:15:33.09:0,33,439	1/1:0,13:13:30.04:354,30,0	1/1:1,15:17:38.86:403,39,0	0/0:11,0:11:21.05:0,21,281	0/0:13,0:13:33.10:0,33,455	0/0:10,0:10:15.05:0,15,213	0/0:20,0:20:42.12:0,42,568	0/0:14,0:14:36.11:0,36,491	1/1:4,14:18:39.12:484,39,0	1/1:1,11:12:18.06:231,18,0	0/0:21,1:20:37.41:0,37,475	0/0:14,1:15:42.12:0,42,574	0/0:15,0:15:30.07:0,30,364	1/1:0,3:3:9.03:115,9,0	1/1:1,9:10:15:193,15,0	1/1:3,19:20:42:487,42,0	0/0:14,0:14:33.08:0,33,436	0/0:15,0:15:14.44:0,14,466	0/0:20,0:20:41.82:0,42,482	0/0:6,0:6:18.06:0,18,255
chr10	87661659	.	CAG	C	4328.68	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.236;DP=716;FS=3.683;HRun=0;HaplotypeScore=87.9306;InbreedingCoeff=0.9997;MQ=83.41;MQ0=0;MQRankSum=-2.841;QD=45.09;ReadPosRankSum=3.184;VQSLOD=6.1851;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,175,3458	1/1:0,10:10:27.09:441,27,0	0/0:27,0:27:81.14:0,81,1577	0/0:18,0:18:47.62:0,48,849	0/0:27,0:27:81.28:0,81,1597	0/0:22,0:22:60.21:0,60,1219	0/0:28,0:28:84.27:0,84,1635	0/0:30,0:30:90.30:0,90,1740	0/0:26,0:26:78.27:0,78,1555	1/1:0,20:20:60.19:951,60,0	1/1:0,28:28:81.28:1322,81,0	0/0:28,0:28:81.26:0,81,1598	0/0:22,0:22:66.23:0,66,1328	0/0:18,0:18:54.17:0,54,1061	0/0:24,0:24:72.22:0,72,1377	0/0:21,0:21:63.21:0,63,1212	1/1:0,38:38:99:1615,99,0	0/0:25,0:25:72.20:0,72,1401	0/0:27,0:27:81.27:0,81,1587	0/0:30,0:30:87.30:0,87,1759	0/0:25,0:25:72.25:0,72,1429	0/0:16,0:16:48.16:0,48,951	0/0:23,0:23:66.23:0,66,1284	0/0:29,0:29:87.30:0,87,1759	0/0:18,0:18:54.17:0,54,1060	0/0:33,0:33:99:0,99,1942	0/0:29,0:29:87.30:0,87,1736	0/0:15,0:15:45.15:0,45,914
chr10	87663437	.	G	GA	4670.37	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-14.247;DP=803;FS=0.342;HRun=8;HaplotypeScore=77.0803;InbreedingCoeff=0.9865;MQ=75.21;MQ0=0;MQRankSum=-2.729;QD=29.37;ReadPosRankSum=0.576;VQSLOD=4.7263;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,1:46:91.27:0,91,1065	0/0:13,0:12:30.02:0,30,275	0/0:21,0:21:57:0,57,515	0/0:17,0:17:8.45:0,8,290	0/0:33,0:33:93.03:0,93,846	1/1:2,27:29:75.22:863,75,0	1/1:3,31:34:81.24:934,81,0	0/0:38,0:38:96.02:0,96,871	0/0:32,0:32:81.01:0,81,737	0/0:37,0:37:96.05:0,96,879	0/0:13,0:13:33:0,33,297	0/0:36,0:36:92.99:0,93,838	0/0:30,0:30:84:0,84,761	0/0:31,0:31:78.02:0,78,709	0/0:49,0:49:99:0,135,1236	0/0:44,0:44:99:0,129,1174	0/0:25,0:25:57.02:0,57,521	1/1:2,10:12:30.09:346,30,0	0/0:20,0:20:54.03:0,54,494	0/0:29,0:29:81.04:0,81,741	0/0:28,0:28:72.03:0,72,659	1/1:2,21:23:60.18:692,60,0	1/1:2,29:31:81.24:934,81,0	1/1:2,28:30:78.23:900,78,0	0/0:22,0:21:48.02:0,48,439	0/0:35,0:35:90.03:0,90,820	0/0:33,0:33:79.14:0,79,785	0/0:12,0:12:35.98:0,36,319
chr10	87663533	.	TCTG	T	1168.29	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.751;DP=717;FS=1.284;HRun=0;HaplotypeScore=130.8793;InbreedingCoeff=0.9883;MQ=78.02;MQ0=1;MQRankSum=-8.655;QD=27.17;ReadPosRankSum=0.621;VQSLOD=3.9983;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,2996	1/1:1,6:6:15.05:191,15,0	0/0:23,0:17:14.74:0,15,375	0/0:31,0:26:33.84:0,34,592	0/0:25,0:25:69.24:0,69,1650	0/0:22,0:22:63.22:0,63,1553	0/0:37,0:37:99:0,111,2736	0/0:13,0:13:39.13:0,39,954	0/0:28,0:28:84.29:0,84,2050	1/1:0,16:14:42.13:530,42,0	1/1:2,4:6:18.04:198,18,0	0/0:31,0:31:93.32:0,93,2283	0/0:22,0:22:66.23:0,66,1620	0/0:27,0:27:81.28:0,81,1985	0/0:37,0:37:99:0,111,2632	0/0:34,0:34:99:0,102,2504	1/1:3,11:14:35.98:407,36,0	0/0:10,0:10:30.10:0,30,735	0/0:12,0:12:36.12:0,36,888	0/0:22,0:22:63.22:0,63,1542	0/0:48,0:48:99:0,144,3500	0/0:22,0:22:63.22:0,63,1490	0/0:28,0:28:72.25:0,72,1734	0/0:31,0:31:87.30:0,87,2145	0/0:27,0:27:69.22:0,69,1648	0/0:33,1:34:64.81:0,65,2349	0/0:42,0:42:99:0,126,3051	0/0:23,0:23:69.24:0,69,1692
chr10	87663537	.	AGTTTGGTCACTCAG	A	3784.11	PASS	AB=0.972;AC=9;AF=0.161;AN=56;BaseQRankSum=9.887;DP=721;FS=4.091;HRun=0;HaplotypeScore=283.3651;InbreedingCoeff=0.8677;MQ=77.20;MQ0=1;MQRankSum=-8.776;QD=52.56;ReadPosRankSum=2.100;VQSLOD=2.9714;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,8562	1/1:0,6:5:15.05:575,15,0	0/0:24,0:16:41.97:0,42,1288	0/0:34,0:28:40.17:0,40,1146	0/0:23,0:23:63.22:0,63,4046	0/0:20,0:20:60.19:0,60,3950	0/0:37,0:37:99:0,111,7429	0/0:16,0:16:48.16:0,48,2964	0/0:28,0:28:84.29:0,84,5514	1/1:0,16:14:42.14:1607,42,0	1/1:0,4:4:12.04:453,12,0	0/0:31,0:31:93.32:0,93,6268	0/0:24,0:24:72.25:0,72,4698	0/0:26,0:26:78.27:0,78,5085	0/0:38,0:38:99:0,114,7733	0/0:35,0:35:99:0,105,7411	1/1:0,11:11:30.10:1140,30,0	0/0:10,0:10:30.10:0,30,1959	0/0:13,0:13:39.13:0,39,2169	0/0:23,0:23:66.23:0,66,4346	0/0:50,0:50:99:0,151,10238	0/0:21,0:21:63.22:0,63,4244	0/0:29,0:29:75.24:0,75,4600	0/0:31,0:31:93.30:0,93,5768	0/0:25,0:25:66.23:0,66,4453	0/1:34,1:35:9.06:9,0,6403	0/0:44,0:44:99:0,132,8694	0/0:23,0:23:69.24:0,69,4550
chr10	87664362	.	ATAGAGGTGAGTGGTCTCTGAGTGCAGCAGGAGG	A	306.45	PASS	AB=1.000;AC=5;AF=0.114;AN=44;BaseQRankSum=-1.932;DP=753;FS=1.985;HRun=0;HaplotypeScore=255.5221;InbreedingCoeff=0.6276;MQ=32.38;MQ0=212;MQRankSum=2.614;QD=4.79;ReadPosRankSum=-0.956;VQSLOD=2.5854;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:26:7.20:0,7,96	0/0:17,0:8:11.88:0,12,147	./.	./.	0/0:25,0:23:9.02:0,9,179	./.	./.	0/0:27,0:15:14.93:0,15,117	0/0:25,0:19:12.04:0,12,234	0/0:45,0:24:32.42:0,32,571	0/0:13,0:10:0:0,0,0	0/0:32,0:24:9.03:0,9,149	0/0:32,0:24:12.43:0,12,200	0/0:32,0:21:17.98:0,18,337	0/0:34,0:31:22.25:0,22,353	0/0:26,0:23:18.58:0,19,271	0/0:17,0:13:9.03:0,9,202	1/1:14,0:13:9:165,9,0	0/0:18,0:8:9.50:0,10,217	0/1:30,0:23:0:0,0,0	0/0:79,0:64:31.63:0,32,452	./.	./.	1/1:20,0:16:11.99:245,12,0	0/0:14,0:13:3.01:0,3,77	0/0:28,0:19:21.03:0,21,427	0/0:32,0:25:15.39:0,15,126	0/0:7,0:4:6.02:0,6,116
chr10	87664944	.	A	AGCCTACGGATG	25333.29	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-6.871;DP=580;FS=2.160;HRun=0;HaplotypeScore=177.9519;InbreedingCoeff=0.9251;MQ=61.47;MQ0=0;MQRankSum=-17.539;QD=95.96;ReadPosRankSum=1.072;VQSLOD=4.6711;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,25:34:63.22:3212,63,0	1/1:0,10:11:30.10:1711,30,0	0/0:26,0:26:57.58:0,58,1845	0/0:20,0:18:41.93:0,42,1035	0/0:17,0:17:48.15:0,48,1613	1/1:4,9:17:27.05:1390,27,0	1/1:18,12:33:84.29:4059,84,0	0/0:29,0:29:81.27:0,81,2567	0/0:17,0:17:45.14:0,45,1508	1/1:12,9:21:57.20:2821,57,0	1/1:6,12:22:21.07:1171,21,0	0/0:22,0:22:63.22:0,63,2058	0/0:18,0:18:51.14:0,51,1560	0/0:16,0:16:45.14:0,45,1469	0/0:22,0:22:63.22:0,63,2143	0/0:13,0:13:39.13:0,39,1361	1/1:9,13:23:54.19:2938,54,0	1/1:6,9:14:33.11:1886,33,0	0/0:18,0:18:54.19:0,54,1783	0/0:17,0:17:45.15:0,45,1575	0/0:40,0:40:99:0,108,3580	1/1:8,16:26:51.18:2716,51,0	1/1:6,10:17:30.10:1580,30,0	1/1:14,9:25:42.57:1782,43,0	0/0:13,0:13:36.12:0,36,1170	0/1:20,0:20:67.88:68,0,1826	0/0:19,0:19:57.18:0,57,1866	0/0:9,0:9:27.09:0,27,953
chr10	87665526	.	TC	T	585.03	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=7.085;DP=344;FS=39.422;HRun=2;HaplotypeScore=45.5983;InbreedingCoeff=0.7754;MQ=57.00;MQ0=16;MQRankSum=-5.820;QD=10.83;ReadPosRankSum=1.110;VQSLOD=-0.4247;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:13:30.03:0,30,399	1/1:2,2:3:6:53,6,0	0/0:11,1:4:1.21:0,1,8	0/1:15,0:6:1.51:2,0,17	0/0:14,0:13:36.01:0,36,468	0/0:13,0:13:18.04:0,18,230	0/0:10,0:8:17.97:0,18,217	0/0:24,0:22:56.95:0,57,699	0/0:18,0:18:54.14:0,54,747	1/1:5,4:8:23.76:183,24,0	1/1:6,6:12:20.15:225,20,0	0/0:21,0:21:54.14:0,54,730	0/0:5,0:5:15.04:0,15,203	0/0:21,0:21:63.17:0,63,865	0/0:11,0:10:30.09:0,30,429	0/0:8,0:8:24.07:0,24,339	1/1:10,4:12:32.85:273,33,0	0/0:12,0:10:27.07:0,27,370	0/0:19,0:18:51.14:0,51,718	0/0:12,0:12:33.07:0,33,431	0/0:12,0:11:30.10:0,30,445	0/0:4,0:3:9.02:0,9,116	0/0:3,0:2:6.01:0,6,70	0/0:9,0:9:23.09:0,23,294	0/0:12,0:12:36.06:0,36,437	0/0:15,0:15:45.13:0,45,634	0/0:15,0:15:35.24:0,35,496	0/0:5,0:3:6.02:0,6,90
chr10	87665531	.	AAAAAAGAAAAG	A	1432.33	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.716;DP=382;FS=36.753;HRun=0;HaplotypeScore=120.7490;InbreedingCoeff=0.9200;MQ=67.11;MQ0=12;MQRankSum=-6.741;QD=42.13;ReadPosRankSum=3.314;VQSLOD=1.6389;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:22:48.13:0,48,1517	1/1:1,2:3:6.02:171,6,0	0/0:19,0:9:26.74:0,27,583	0/0:24,0:13:27.97:0,28,458	0/0:17,0:16:38.78:0,39,1495	0/0:11,0:11:11.99:0,12,251	0/0:9,0:8:20.96:0,21,537	0/0:26,0:24:60.11:0,60,2431	0/0:21,0:21:57.17:0,57,2941	1/1:5,4:8:18.02:418,18,0	1/1:5,5:10:23.82:584,24,0	0/0:20,0:20:45.10:0,45,2120	0/0:4,0:4:12.04:0,12,641	0/0:24,0:24:60.05:0,60,2406	0/0:11,0:10:27.03:0,27,931	0/0:7,0:7:21.07:0,21,904	1/1:8,4:10:21.03:410,21,0	0/0:12,0:10:24.05:0,24,733	0/0:19,0:17:51.18:0,51,2228	0/0:11,0:11:27:0,27,1149	0/0:13,0:13:34.34:0,34,1776	0/0:6,0:5:14.69:0,15,166	0/0:6,0:5:15.03:0,15,359	0/0:9,0:9:23.86:0,24,350	0/0:14,0:14:27.03:0,27,1330	0/0:19,0:19:54.16:0,54,2620	0/0:14,0:14:39.11:0,39,1679	0/0:6,0:4:9.03:0,9,381
chr10	87667219	.	G	GT	10044.72	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-15.249;DP=751;FS=0.286;HRun=4;HaplotypeScore=71.0163;InbreedingCoeff=0.9984;MQ=83.61;MQ0=0;MQRankSum=-2.100;QD=34.76;ReadPosRankSum=2.512;VQSLOD=5.4044;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,46:50:99:1841,135,0	1/1:1,14:15:35.89:492,36,0	0/0:23,0:23:63.15:0,63,694	0/0:20,0:20:22.32:0,22,473	0/0:34,0:34:90.24:0,90,1008	1/1:1,19:20:54.18:739,54,0	1/1:4,19:23:54.14:718,54,0	0/0:23,0:23:66.18:0,66,740	0/0:32,0:32:87.25:0,87,987	1/1:1,23:24:69.23:942,69,0	1/1:2,8:10:18.06:246,18,0	0/0:29,0:29:87.23:0,87,977	0/0:21,0:21:57.14:0,57,634	0/0:25,0:25:75.19:0,75,839	0/0:32,0:32:93.26:0,93,1054	0/0:26,0:26:69.20:0,69,783	1/1:5,26:31:75.25:1026,75,0	1/1:1,28:29:78.26:1067,78,0	0/0:22,0:22:60.16:0,60,673	0/0:32,0:32:87.23:0,87,976	0/0:49,0:49:99:0,135,1521	1/1:2,29:31:80.96:1107,81,0	1/1:3,19:22:47.98:652,48,0	1/1:4,30:34:90.29:1215,90,0	0/0:25,0:25:66.17:0,66,739	0/0:33,0:33:93.25:0,93,1045	0/0:23,0:23:66.17:0,66,738	0/0:13,0:13:39.11:0,39,442
chr10	87667875	.	TA	T	1102.75	PASS	AB=0.971;AC=11;AF=0.196;AN=56;BaseQRankSum=10.458;DP=442;FS=0.523;HRun=12;HaplotypeScore=46.9975;InbreedingCoeff=0.7211;MQ=58.55;MQ0=27;MQRankSum=0.896;QD=10.31;ReadPosRankSum=2.275;VQSLOD=2.5463;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,1:24:54.10:0,54,544	1/1:2,8:10:23.91:186,24,0	0/0:12,0:9:14.58:0,15,118	0/1:8,0:4:0.89:1,0,9	0/1:19,2:21:1.31:1,0,330	0/0:18,0:17:42.06:0,42,418	0/0:10,0:10:24.01:0,24,233	0/0:35,0:29:35.63:0,36,471	0/0:11,0:11:26.78:0,27,250	1/1:6,19:23:58.96:444,59,0	1/1:1,12:11:32.87:255,33,0	0/1:7,0:7:3.34:3,0,134	0/0:14,0:14:35.95:0,36,331	0/0:11,0:11:23.97:0,24,224	0/0:18,0:16:36.07:0,36,365	0/0:12,0:13:26.64:0,27,253	1/1:5,18:20:47.77:371,48,0	0/0:20,0:15:27.01:0,27,263	0/0:19,0:18:21.86:0,22,394	0/0:14,0:13:33.03:0,33,324	0/0:7,0:6:18.03:0,18,179	0/0:4,0:4:9.02:0,9,91	0/0:7,0:6:11.98:0,12,112	0/0:9,0:7:2.53:0,3,137	0/0:25,0:23:57.11:0,57,579	0/0:22,0:20:51.04:0,51,493	0/0:27,0:25:66.08:0,66,649	0/0:13,0:11:23.18:0,23,268
chr10	87669885	.	C	CA	665.82	PASS	AB=0.814;AC=9;AF=0.161;AN=56;BaseQRankSum=-2.707;DP=583;FS=4.678;HRun=13;HaplotypeScore=69.5622;InbreedingCoeff=0.3225;MQ=58.36;MQ0=37;MQRankSum=-0.410;QD=4.01;ReadPosRankSum=-1.964;VQSLOD=0.7276;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:33:44.79:0,45,129	1/1:2,4:7:11.85:98,12,0	0/0:41,0:10:11.49:0,11,63	0/1:31,0:7:0.81:1,0,15	0/0:18,1:21:29.64:0,30,178	0/1:19,3:25:26.81:27,0,249	0/0:16,1:19:6.73:0,7,176	0/0:26,0:27:39.73:0,40,249	0/0:13,0:13:29.53:0,30,194	1/1:10,14:25:21.24:311,21,0	0/1:6,10:17:13.63:131,0,14	0/0:14,0:15:25.70:0,26,165	0/0:15,0:16:19.70:0,20,129	0/0:14,0:14:26.71:0,27,184	0/0:14,2:15:6.91:0,7,182	0/0:15,0:15:18.12:0,18,207	0/1:21,22:42:94.21:221,0,94	0/0:21,1:24:9.68:0,10,197	0/0:17,1:17:28.72:0,29,223	0/0:18,0:16:22.32:0,22,160	0/0:15,0:15:29.54:0,30,196	0/0:4,0:6:9.98:0,10,53	0/0:19,1:21:22.82:0,23,274	0/0:21,0:25:50.42:0,50,311	0/0:11,0:14:26.57:0,27,161	0/0:22,0:21:41.59:0,42,287	0/0:16,0:18:38.33:0,38,232	0/1:12,2:13:20.92:21,0,155
chr10	87670109	.	GGAC	G	1293.49	PASS	AB=0.795;AC=6;AF=0.107;AN=56;BaseQRankSum=8.620;DP=530;FS=2.159;HRun=0;HaplotypeScore=102.6958;InbreedingCoeff=-0.1226;MQ=78.89;MQ0=0;MQRankSum=-6.009;QD=9.87;ReadPosRankSum=-1.895;VQSLOD=2.7076;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.85:0,82,1101	0/0:8,0:8:21.07:0,21,286	0/0:34,0:30:79.80:0,80,1512	0/0:21,0:17:38.01:0,38,615	0/0:15,0:15:39.13:0,39,860	0/1:20,9:29:99:302,0,655	0/1:16,5:21:99:283,0,373	0/0:29,0:29:84.23:0,84,1722	0/0:17,0:17:51.17:0,51,1063	0/0:19,0:19:30.23:0,30,683	0/0:10,0:10:22.92:0,23,325	0/0:20,0:20:54.19:0,54,1221	0/0:13,0:13:36.12:0,36,784	0/0:18,0:18:54.19:0,54,1149	0/0:14,0:14:39.13:0,39,872	0/0:15,0:15:45.15:0,45,1018	0/0:25,1:26:9.72:0,10,784	0/1:12,2:14:63.36:63,0,456	0/0:23,0:23:63.19:0,63,1287	0/0:15,0:15:36.12:0,36,782	0/0:18,0:18:51.17:0,51,1126	0/1:11,7:18:99:320,0,360	0/1:11,3:14:99:122,0,361	0/1:25,10:35:99:327,0,888	0/0:13,0:13:39.13:0,39,860	0/0:11,0:11:33.11:0,33,724	0/0:20,0:20:60.21:0,60,1317	0/0:9,0:9:27.09:0,27,606
chr10	87671635	.	C	CT	1824.56	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.288;DP=705;FS=0.000;HRun=1;HaplotypeScore=67.4017;InbreedingCoeff=0.9983;MQ=82.76;MQ0=0;MQRankSum=-4.681;QD=38.82;ReadPosRankSum=-1.081;VQSLOD=3.6314;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,45:47:99:1919,129,0	0/0:9,0:9:27.07:0,27,336	0/0:23,0:23:63.04:0,63,775	0/0:26,0:26:65.54:0,66,871	0/0:16,0:16:45.15:0,45,584	0/0:20,0:20:54.18:0,54,701	0/0:26,0:26:75.23:0,75,959	0/0:27,0:27:72.23:0,72,935	0/0:30,0:30:90.28:0,90,1153	0/0:14,0:14:39.13:0,39,505	0/0:10,0:10:30.10:0,30,389	0/0:20,0:20:57.16:0,57,712	0/0:20,0:20:54.11:0,54,665	0/0:35,0:35:99:0,105,1348	0/0:38,0:37:99:0,114,1466	0/0:27,0:27:81.26:0,81,1051	0/0:37,0:37:99:0,108,1402	0/0:14,0:14:39.11:0,39,492	0/0:26,0:26:72.23:0,72,923	0/0:17,0:17:48.16:0,48,623	0/0:52,0:52:99:0,157,2026	0/0:18,0:18:54.18:0,54,701	0/0:16,0:16:45.15:0,45,584	0/0:37,0:37:99:0,108,1402	0/0:22,0:22:66.21:0,66,856	0/0:28,0:28:78.25:0,78,1001	0/0:30,0:30:90.29:0,90,1169	0/0:20,0:20:60.18:0,60,765
chr10	87673699	.	C	CTT	751.56	PASS	AB=0.862;AC=24;AF=0.429;AN=56;BaseQRankSum=5.022;DP=535;FS=0.516;HRun=15;HaplotypeScore=115.3578;InbreedingCoeff=0.6595;MQ=68.32;MQ0=11;MQRankSum=-1.181;QD=3.80;ReadPosRankSum=-2.060;VQSLOD=-0.0679;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,1:24:4.57:106,5,0	1/1:3,0:3:5.48:32,5,0	0/0:46,0:15:5.46:0,5,48	0/0:46,1:22:10.76:0,11,63	0/0:25,0:25:23.14:0,23,268	1/1:14,0:21:4.89:109,5,0	1/1:6,3:14:9.58:39,10,0	0/0:41,0:39:32.05:0,32,328	0/0:6,0:6:5.80:0,6,47	0/1:16,0:20:2.01:88,0,2	1/1:10,1:14:13.11:86,13,0	0/1:9,0:10:17.15:17,0,45	0/0:9,0:8:1.28:0,1,21	1/1:6,0:6:0.89:2,1,0	0/0:14,0:14:14.35:0,14,118	0/0:6,0:9:8.29:0,8,47	1/1:26,3:31:10.75:166,11,0	1/1:15,0:24:7.21:108,7,0	0/0:30,0:30:50.45:0,50,403	0/0:11,0:12:29.57:0,30,222	0/0:16,0:17:17.32:0,17,127	1/1:1,0:3:4.87:17,5,0	1/1:7,0:13:9.96:36,10,0	1/1:8,0:10:19.52:136,20,0	0/0:7,0:7:8.86:0,9,71	0/0:18,0:19:32.23:0,32,244	0/0:17,0:17:20.32:0,20,163	0/0:29,0:28:47.29:0,47,362
chr10	87673718	.	AT	A	673.21	PASS	AB=0.915;AC=14;AF=0.259;AN=54;BaseQRankSum=5.892;DP=599;FS=12.344;HRun=12;HaplotypeScore=80.9236;InbreedingCoeff=0.5441;MQ=57.96;MQ0=32;MQRankSum=-1.310;QD=4.34;ReadPosRankSum=2.503;VQSLOD=0.5600;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:26:24.26:81,24,0	1/1:3,2:4:6.45:47,6,0	0/0:53,0:14:17.84:0,18,144	0/0:55,0:18:21.85:0,22,140	0/0:26,1:26:25.89:0,26,466	0/0:22,0:25:17.84:0,18,351	0/0:15,0:13:19.62:0,20,159	0/0:46,0:40:42.06:0,42,454	0/0:6,0:6:11.05:0,11,97	1/1:8,11:17:29.36:238,29,0	1/1:6,6:12:18.33:116,18,0	0/0:13,0:12:24.02:0,24,233	0/1:5,1:5:11.19:11,0,79	0/1:6,0:6:9.94:10,0,81	0/0:16,0:15:36.01:0,36,353	0/0:11,0:10:20.53:0,21,190	1/1:27,10:34:0.35:317,0,0	0/0:24,0:23:44.03:0,44,424	0/0:39,1:35:41.29:0,41,636	0/0:20,0:19:43.02:0,43,455	0/0:14,0:13:14.66:0,15,141	./.	0/0:12,0:12:16.59:0,17,139	0/0:11,0:11:21.51:0,22,214	0/1:5,1:6:10.74:11,0,79	0/0:28,0:27:64.45:0,64,577	0/0:20,0:22:43.10:0,43,482	0/1:32,2:29:9.44:9,0,456
chr10	87677589	.	T	TA	1433.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.289;DP=663;FS=2.298;HRun=3;HaplotypeScore=62.1851;InbreedingCoeff=0.9996;MQ=84.59;MQ0=0;MQRankSum=-4.548;QD=34.95;ReadPosRankSum=1.529;VQSLOD=4.3490;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,40:41:99:1528,102,0	0/0:11,0:11:33.11:0,33,426	0/0:20,0:20:56.19:0,56,674	0/0:22,0:22:59.98:0,60,702	0/0:26,0:26:75.24:0,75,971	0/0:25,0:25:69.22:0,69,895	0/0:27,0:27:78.19:0,78,964	0/0:28,0:28:84.26:0,84,1074	0/0:22,0:22:57.18:0,57,737	0/0:21,0:21:63.20:0,63,817	0/0:20,0:20:51.17:0,51,662	0/0:21,0:21:63.20:0,63,816	0/0:13,0:13:36.12:0,36,467	0/0:20,0:20:57.19:0,57,740	0/0:16,0:16:48.16:0,48,623	0/0:23,0:23:69.21:0,69,880	0/0:22,0:21:63.20:0,63,818	0/0:23,0:23:63.20:0,63,817	0/0:28,0:28:71.16:0,71,929	0/0:19,0:19:57.17:0,57,725	0/0:26,0:26:75.24:0,75,974	0/0:27,0:27:78.25:0,78,1012	0/0:22,0:22:66.20:0,66,842	0/0:26,0:26:72.23:0,72,935	0/0:29,0:29:84.27:0,84,1091	0/0:37,0:37:99:0,108,1390	0/0:25,0:24:75.24:0,75,971	0/0:23,0:23:69.22:0,69,895
chr10	87677658	.	TTCTCTCTC	T	56.86	PASS	AC=10;AF=0.238;AN=42;BaseQRankSum=0.959;DP=530;FS=4.869;HRun=0;HaplotypeScore=120.6034;InbreedingCoeff=0.4059;MQ=65.25;MQ0=21;MQRankSum=1.115;QD=0.56;ReadPosRankSum=1.892;VQSLOD=1.9591;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:3.01:0,3,32	1/1:10,0:10:2.87:26,3,0	./.	0/0:49,0:18:0.47:0,0,1	./.	./.	./.	0/0:20,0:20:0.89:0,1,2	0/0:18,0:18:9.02:0,9,155	1/1:30,0:29:1.46:26,1,0	./.	0/0:14,0:14:9.01:0,9,147	0/0:18,0:17:0:0,0,0	0/0:9,0:9:3.01:0,3,73	0/0:17,0:16:6.01:0,6,91	0/0:9,0:9:6.02:0,6,182	1/1:18,4:20:2.87:73,3,0	1/1:15,0:14:3.48:12,3,0	0/0:18,0:17:9.02:0,9,142	./.	0/0:7,0:7:3.01:0,3,62	0/0:21,0:21:0:0,0,0	./.	1/1:24,0:23:2.99:27,3,0	0/0:24,0:23:0:0,0,0	0/0:25,0:24:9.03:0,9,202	0/0:12,0:12:3.01:0,3,64	0/0:16,0:12:6.02:0,6,174
chr10	87679762	.	CA	C	1841.97	PASS	AB=0.733;AC=16;AF=0.286;AN=56;BaseQRankSum=-1.370;DP=685;FS=5.886;HRun=14;HaplotypeScore=111.2464;InbreedingCoeff=0.1174;MQ=72.11;MQ0=6;MQRankSum=1.081;QD=5.87;ReadPosRankSum=3.433;VQSLOD=2.7250;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,1:35:19.98:0,20,204	0/0:1,0:7:7.24:0,7,32	0/0:38,2:23:24.09:0,24,199	0/0:32,1:16:16.73:0,17,92	0/1:24,2:27:4.03:4,0,268	0/1:11,12:26:99:218,0,99	0/1:11,9:20:6.48:153,0,6	0/1:19,13:33:99:170,0,135	0/0:17,1:20:25.23:0,25,307	0/0:11,0:32:16.53:0,17,179	0/0:2,0:17:23.48:0,23,125	0/0:17,1:19:11.38:0,11,210	0/0:20,0:20:42.01:0,42,377	0/0:22,0:22:33.23:0,33,416	0/1:31,4:35:25.96:26,0,416	0/0:29,0:29:24.91:0,25,469	0/0:2,0:15:5.68:0,6,29	1/1:13,6:19:3.81:160,4,0	0/1:10,13:23:5.58:213,0,6	0/1:9,14:26:65.45:242,0,65	0/1:10,12:22:27.10:130,0,27	1/1:3,9:12:14.79:103,15,0	0/1:17,10:29:22.59:226,0,23	0/1:18,3:21:46.94:142,0,47	0/0:20,1:21:9.99:0,10,359	0/0:27,1:37:34.49:0,34,275	1/1:11,10:21:25.82:223,26,0	0/0:8,0:23:28.54:0,29,151
chr10	87680502	.	GT	G	698.31	PASS	AB=0.900;AC=19;AF=0.339;AN=56;BaseQRankSum=5.527;DP=330;FS=7.315;HRun=1;HaplotypeScore=45.6009;InbreedingCoeff=0.7670;MQ=70.20;MQ0=4;MQRankSum=0.806;QD=7.05;ReadPosRankSum=5.290;VQSLOD=0.7724;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:26:19.92:57,20,0	1/1:2,0:2:1.82:5,2,0	0/0:17,0:8:15.11:0,15,213	0/0:13,0:8:23.75:0,24,296	0/0:13,0:12:29.97:0,30,382	1/1:2,14:16:9.03:120,9,0	1/1:5,1:5:12.04:164,12,0	0/0:31,0:30:60.66:0,61,879	0/0:3,0:3:3.01:0,3,36	0/0:9,0:9:7.16:0,7,45	1/1:4,0:4:2.50:27,2,0	0/0:13,0:12:21.07:0,21,309	0/0:5,0:5:15.03:0,15,209	0/1:8,1:9:0:0,0,0	0/0:12,0:12:21.06:0,21,276	0/0:4,0:4:9.03:0,9,124	0/0:21,0:20:1.78:0,2,51	1/1:3,16:18:18.33:245,18,0	0/0:27,0:26:71.50:0,72,1002	0/0:11,0:10:21.48:0,21,272	0/0:9,0:8:17.94:0,18,216	1/1:2,0:2:5.99:60,6,0	1/1:2,1:3:6.02:80,6,0	1/1:1,11:11:9.03:120,9,0	0/0:9,0:9:21.06:0,21,282	0/0:8,0:8:17.86:0,18,172	0/0:17,0:16:48.09:0,48,633	0/0:9,0:9:20.63:0,21,234
chr10	87681262	.	GTGTCTGTCTGTC	G	4394.29	PASS	AB=0.667;AC=19;AF=0.339;AN=56;BaseQRankSum=10.053;DP=582;FS=1.158;HRun=0;HaplotypeScore=199.6387;InbreedingCoeff=0.8026;MQ=70.60;MQ0=1;MQRankSum=-11.167;QD=23.75;ReadPosRankSum=-0.356;VQSLOD=4.1633;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,19:31:30.10:1040,30,0	0/0:2,0:8:0.03:0,0,14	0/0:33,0:30:15.01:0,15,483	0/0:22,0:14:9.02:0,9,115	0/0:14,0:14:24.08:0,24,1094	1/1:10,21:31:45.15:1560,45,0	1/1:7,13:20:12.04:415,12,0	0/0:33,0:33:36.12:0,36,1518	0/0:24,0:24:45.15:0,45,2322	0/1:9,0:18:1.44:1,0,118	1/1:3,0:10:6.22:15,6,0	0/0:16,0:16:39.13:0,39,2216	0/0:15,0:15:24.08:0,24,1384	0/0:23,0:23:42.14:0,42,2336	0/0:8,0:27:39.82:0,40,1042	0/0:25,0:27:60.19:0,60,3086	1/1:9,0:17:4.66:11,5,0	1/1:10,13:23:12.04:416,12,0	0/0:14,0:13:27.08:0,27,1187	0/0:13,0:13:24.08:0,24,1257	0/0:51,0:51:84.25:0,84,4417	1/1:5,3:8:6.02:208,6,0	1/1:2,9:11:18.06:624,18,0	1/1:7,9:16:3.01:105,3,0	0/0:14,0:14:27.08:0,27,1434	0/0:12,0:13:9.84:0,10,574	0/0:30,0:29:60.17:0,60,2942	0/0:19,0:20:36.12:0,36,1771
chr10	87682346	.	T	TAAAC	6277.99	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-0.700;DP=619;FS=10.783;HRun=0;HaplotypeScore=110.0951;InbreedingCoeff=0.9985;MQ=69.40;MQ0=0;MQRankSum=-8.153;QD=51.88;ReadPosRankSum=-1.389;VQSLOD=5.3813;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,21:36:72.23:1608,72,0	1/1:2,8:10:24.08:593,24,0	0/0:19,0:18:26.89:0,27,362	0/0:17,0:17:39.08:0,39,589	0/0:23,0:22:54.18:0,54,889	0/0:20,0:20:48.16:0,48,803	0/0:23,0:23:33.20:0,33,816	0/0:21,0:21:39.11:0,39,603	0/0:15,0:15:33.09:0,33,525	1/1:4,26:30:81.20:1794,81,0	1/1:7,15:22:57.18:1223,57,0	0/0:28,0:28:78.22:0,78,1217	0/0:16,0:16:42.13:0,42,671	0/0:11,0:11:24.07:0,24,378	0/0:15,0:15:33.10:0,33,526	0/0:25,0:25:66.21:0,66,1075	1/1:8,15:22:48.10:1060,48,0	0/0:23,0:23:50.84:0,51,852	0/0:32,0:32:66.15:0,66,1010	0/0:40,0:40:84.29:0,84,1405	0/0:17,0:17:39.13:0,39,652	0/0:20,0:20:51.17:0,51,852	0/0:27,0:27:54.18:0,54,903	0/0:19,0:19:51.15:0,51,814	0/0:18,0:18:45.15:0,45,753	0/0:21,0:21:51.16:0,51,820	0/0:32,0:31:81.22:0,81,1272	0/0:15,0:16:39.11:0,39,630
chr10	87682376	.	C	CTT	1982	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=8.235;DP=605;FS=13.325;HRun=11;HaplotypeScore=98.2017;InbreedingCoeff=0.7448;MQ=63.93;MQ0=4;MQRankSum=-7.350;QD=17.23;ReadPosRankSum=-2.112;VQSLOD=0.6647;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:44.59:0,45,432	1/1:5,3:9:14.52:164,15,0	0/1:17,0:10:6.37:6,0,44	0/1:13,0:9:13.41:13,0,39	0/0:25,0:26:59.73:0,60,559	0/0:21,0:21:41.97:0,42,400	0/0:17,0:17:36.02:0,36,349	0/0:25,0:27:47.16:0,47,425	0/0:15,0:16:41.79:0,42,384	1/1:15,10:26:53.46:657,53,0	1/1:4,19:25:53.54:659,54,0	0/0:22,0:22:54.01:0,54,510	0/0:16,0:16:39.01:0,39,372	0/0:9,0:10:14.70:0,15,128	0/0:17,0:19:41.67:0,42,434	0/0:23,0:24:56.78:0,57,530	1/1:9,14:24:50.14:647,50,0	0/0:28,0:27:43.45:0,43,427	0/0:32,0:32:62.88:0,63,641	0/0:30,0:32:71.30:0,71,711	0/0:19,0:21:37.94:0,38,353	0/0:18,0:18:35.97:0,36,341	0/0:24,0:26:64.53:0,65,582	0/0:19,0:20:47.79:0,48,494	0/0:16,0:16:4.58:0,5,379	0/0:23,0:23:21.50:0,22,364	0/0:29,0:28:62.74:0,63,593	0/0:15,0:15:42.07:0,42,407
chr10	87683706	.	G	GC	2300.99	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-10.448;DP=669;FS=7.755;HRun=7;HaplotypeScore=72.3673;InbreedingCoeff=0.9994;MQ=88.57;MQ0=0;MQRankSum=-4.054;QD=27.72;ReadPosRankSum=0.108;VQSLOD=4.1454;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.11:0,96,913	1/1:1,15:16:39.12:470,39,0	0/0:25,0:25:57.86:0,58,523	0/0:28,0:28:29.82:0,30,431	0/0:19,0:19:48.07:0,48,463	0/0:26,0:26:66.08:0,66,632	0/0:24,0:24:63.08:0,63,602	0/0:28,0:28:60.07:0,60,572	0/0:36,0:36:87.05:0,87,819	1/1:3,21:24:63.19:761,63,0	1/1:4,20:24:57.02:650,57,0	0/0:29,0:29:84.11:0,84,801	0/0:33,0:33:93.13:0,93,892	0/0:25,0:25:66.07:0,66,626	0/0:33,0:33:99:0,99,956	0/0:29,0:29:78.10:0,78,744	1/1:0,19:19:48.15:580,48,0	0/0:16,0:16:48.08:0,48,463	0/0:13,0:13:36.02:0,36,339	0/0:22,1:23:26.85:0,27,537	0/0:22,0:22:60.06:0,60,572	0/0:16,0:16:45.06:0,45,429	0/0:17,0:17:48.04:0,48,452	0/0:26,0:26:63.02:0,63,592	0/0:12,0:12:33.02:0,33,308	0/0:29,0:29:81.11:0,81,773	0/0:23,0:23:60.01:0,60,549	0/0:19,0:19:45.07:0,45,435
chr10	87684641	.	GATAA	G	6773.04	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.122;DP=675;FS=0.778;HRun=0;HaplotypeScore=110.9451;InbreedingCoeff=0.9995;MQ=87.79;MQ0=0;MQRankSum=-1.895;QD=50.17;ReadPosRankSum=3.238;VQSLOD=5.6497;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,3939	0/0:8,0:8:24.08:0,24,671	0/0:22,0:22:66.19:0,66,1749	0/0:26,0:26:47.33:0,47,1854	0/0:25,0:25:72.23:0,72,1879	1/1:0,16:16:45.15:875,45,0	1/1:0,31:31:69.15:1377,69,0	0/0:40,0:40:99:0,114,3176	0/0:30,0:30:90.31:0,90,2489	0/0:31,0:31:90.30:0,90,2434	0/0:17,0:17:51.18:0,51,1403	0/0:24,0:24:69.24:0,69,1930	0/0:30,0:30:87.30:0,87,2420	0/0:13,0:13:39.13:0,39,1044	0/0:18,0:18:54.19:0,54,1500	0/0:20,0:20:57.20:0,57,1560	0/0:34,0:34:99:0,102,2799	1/1:0,26:26:66.23:1318,66,0	0/0:19,0:19:57.20:0,57,1581	0/0:17,0:17:51.18:0,51,1422	0/0:30,0:30:90.31:0,90,2501	1/1:1,20:21:57.20:1138,57,0	1/1:0,19:19:44.89:868,45,0	1/1:0,22:22:60.21:1197,60,0	0/0:15,0:15:45.15:0,45,1261	0/0:28,0:28:84.29:0,84,2347	0/0:32,0:32:96.33:0,96,2675	0/0:13,0:13:39.13:0,39,1091
chr10	87685587	.	GA	G	454.72	PASS	AB=0.955;AC=3;AF=0.054;AN=56;BaseQRankSum=4.968;DP=444;FS=1.897;HRun=10;HaplotypeScore=54.6848;InbreedingCoeff=0.6188;MQ=77.57;MQ0=0;MQRankSum=-0.862;QD=9.89;ReadPosRankSum=0.676;VQSLOD=2.3315;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:62.98:547,63,0	0/0:11,0:11:27.07:0,27,298	0/0:19,0:17:28.87:0,29,291	0/1:20,1:19:10.37:10,0,241	0/0:24,0:24:65.54:0,66,705	0/0:17,0:18:48.10:0,48,512	0/0:10,0:10:30.04:0,30,318	0/0:22,0:22:51.14:0,51,564	0/0:9,0:9:24.06:0,24,266	0/0:13,0:13:30.08:0,30,330	0/0:13,0:14:29.91:0,30,313	0/0:16,1:18:21.27:0,21,428	0/0:14,0:14:30.08:0,30,332	0/0:14,0:14:36.08:0,36,387	0/0:16,0:16:36.10:0,36,398	0/0:13,0:13:30.08:0,30,331	0/0:21,0:21:51.12:0,51,549	0/0:22,0:22:48.13:0,48,531	0/0:19,0:19:54.14:0,54,590	0/0:17,0:18:44.94:0,45,469	0/0:6,0:6:15.04:0,15,166	0/0:16,0:16:32.58:0,33,341	0/0:6,0:6:15.04:0,15,166	0/0:4,0:4:9.02:0,9,100	0/0:13,0:13:33.08:0,33,357	0/0:27,0:27:69.19:0,69,763	0/0:22,1:23:48.10:0,48,513	0/0:8,0:8:18.01:0,18,186
chr10	87685916	.	T	TTTTG	3095.04	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=3.787;DP=572;FS=0.000;HRun=0;HaplotypeScore=109.1116;InbreedingCoeff=0.9633;MQ=70.78;MQ0=5;MQRankSum=-7.471;QD=35.17;ReadPosRankSum=-0.974;VQSLOD=3.5226;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:83.35:0,83,1313	0/0:8,0:8:21.07:0,21,345	0/0:40,0:17:14.71:0,15,176	0/0:48,0:31:4.80:0,5,239	0/0:29,0:29:72.25:0,72,1191	1/1:7,8:13:27.09:661,27,0	1/1:6,7:12:26.88:597,27,0	0/0:26,0:26:42.09:0,42,631	0/0:16,0:16:36.12:0,36,597	0/0:19,0:19:45.15:0,45,724	0/0:16,0:16:39.13:0,39,622	0/0:19,0:18:33.10:0,33,525	0/0:10,0:10:18.06:0,18,299	0/0:11,0:11:24.08:0,24,398	0/0:27,0:27:60.15:0,60,938	0/0:19,0:19:33.10:0,33,524	0/0:29,0:28:70.08:0,70,1089	1/1:13,6:19:27.09:620,27,0	0/0:20,0:19:36.12:0,36,594	0/0:16,0:16:42.14:0,42,697	0/0:14,0:14:30.10:0,30,498	1/1:4,5:9:18.06:440,18,0	1/1:3,7:8:21.07:466,21,0	1/1:15,7:22:24.50:498,24,0	0/0:12,0:12:21.05:0,21,319	0/0:22,0:22:51.17:0,51,824	0/0:27,0:27:60.19:0,60,971	0/0:14,0:14:39.09:0,39,572
chr10	87685943	.	GT	G	4943.46	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=13.036;DP=518;FS=9.846;HRun=8;HaplotypeScore=66.3239;InbreedingCoeff=0.9703;MQ=61.16;MQ0=7;MQRankSum=-0.647;QD=23.21;ReadPosRankSum=0.862;VQSLOD=5.2490;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,37:38:99:957,100,0	1/1:0,8:8:24.04:231,24,0	0/0:32,0:11:28.71:0,29,306	0/0:36,0:14:2.83:0,3,92	0/0:25,0:25:72.22:0,72,868	1/1:3,12:13:36.06:347,36,0	1/1:3,14:17:30.04:288,30,0	0/0:25,0:24:57.17:0,57,689	0/0:11,0:11:30.09:0,30,362	1/1:1,21:22:63.07:596,63,0	1/1:1,17:18:47.80:463,48,0	0/0:17,0:16:45.13:0,45,535	0/0:8,0:8:18.06:0,18,217	0/0:12,0:12:24.07:0,24,290	0/0:16,0:16:39.12:0,39,467	0/0:14,0:14:42.13:0,42,507	1/1:2,26:28:75.12:724,75,0	1/1:6,18:24:43.41:474,43,0	0/0:20,0:18:44.49:0,44,504	0/0:16,0:16:39.11:0,39,457	0/0:10,0:10:27.08:0,27,326	1/1:1,6:7:18.03:172,18,0	1/1:2,9:10:27.03:254,27,0	1/1:6,19:25:33.47:438,33,0	0/0:7,0:7:21.04:0,21,240	0/0:22,0:22:51.13:0,51,606	0/0:24,0:24:66.20:0,66,797	0/0:9,0:9:27.08:0,27,326
chr10	87686337	.	CGGT	C	4360.89	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.878;DP=679;FS=8.569;HRun=0;HaplotypeScore=116.4056;InbreedingCoeff=0.9940;MQ=71.46;MQ0=0;MQRankSum=-0.159;QD=25.21;ReadPosRankSum=3.613;VQSLOD=4.7870;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,32:46:68.36:1002,68,0	0/0:8,0:8:18.06:0,18,362	0/0:25,0:24:45.13:0,45,834	0/0:22,0:22:41.88:0,42,744	0/0:25,0:25:45.15:0,45,897	1/1:2,17:19:42.14:610,42,0	1/1:9,18:27:33.11:480,33,0	0/0:34,0:34:66.21:0,66,1269	0/0:19,0:19:42.12:0,42,824	0/0:29,0:29:60.21:0,60,1224	0/0:16,0:16:24.08:0,24,478	0/0:33,0:33:72.23:0,72,1431	0/0:25,0:25:66.23:0,66,1297	0/0:22,0:22:51.18:0,51,1048	0/0:26,0:26:60.21:0,60,1228	0/0:21,0:21:54.19:0,54,1080	0/0:43,0:43:99:0,105,2082	1/1:5,23:28:63.21:917,63,0	0/0:16,0:16:30.05:0,30,514	0/0:12,0:12:20.82:0,21,428	0/0:52,0:52:99:0,120,2390	1/1:11,11:22:36.12:523,36,0	1/1:7,6:13:18.06:262,18,0	1/1:4,14:18:39.13:567,39,0	0/0:12,0:12:27.09:0,27,545	0/0:22,0:22:30.09:0,30,580	0/0:35,0:35:69.24:0,69,1416	0/0:8,0:8:18.06:0,18,368
chr10	87687424	.	C	CT	1628.32	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.667;DP=382;FS=5.346;HRun=1;HaplotypeScore=45.5436;InbreedingCoeff=0.9517;MQ=60.66;MQ0=3;MQRankSum=-1.055;QD=21.71;ReadPosRankSum=3.941;VQSLOD=3.7784;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:32:37.64:0,38,363	0/0:8,0:8:24.08:0,24,333	0/0:6,0:3:9.03:0,9,124	0/0:10,0:8:20.39:0,20,258	0/0:17,0:17:48.15:0,48,653	1/1:1,10:12:29.75:312,30,0	1/1:2,11:13:32.69:321,33,0	0/0:19,0:18:54.18:0,54,747	0/0:12,0:12:36.12:0,36,503	0/0:20,0:20:57.12:0,57,772	0/0:5,0:5:15.05:0,15,209	0/0:15,0:15:45.14:0,45,612	0/0:11,0:10:30.10:0,30,419	0/0:13,0:13:36.12:0,36,502	0/0:17,0:17:45.14:0,45,607	0/0:12,0:12:33.10:0,33,444	0/0:24,0:24:66.12:0,66,877	1/1:3,7:10:18.02:192,18,0	0/0:21,0:21:63.21:0,63,873	0/0:8,0:8:24.08:0,24,335	0/0:12,0:12:36.10:0,36,485	1/1:1,5:6:15.01:156,15,0	1/1:3,7:10:12.51:181,13,0	1/1:3,20:23:61.39:651,61,0	0/0:11,0:10:33.11:0,33,462	0/0:20,0:20:60.19:0,60,816	0/0:12,0:12:33.11:0,33,461	0/0:2,0:2:6.02:0,6,84
chr10	87687686	.	CT	C	1742.56	PASS	AB=0.840;AC=16;AF=0.286;AN=56;BaseQRankSum=9.883;DP=440;FS=15.254;HRun=13;HaplotypeScore=66.7359;InbreedingCoeff=0.7120;MQ=62.17;MQ0=4;MQRankSum=0.150;QD=11.39;ReadPosRankSum=3.856;VQSLOD=1.7302;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:29:56.52:415,57,0	0/0:2,0:2:3:0,3,25	0/0:15,0:11:9:0,9,80	0/0:6,0:5:5.67:0,6,27	0/0:18,2:20:11:0,11,251	1/1:2,14:15:32.77:241,33,0	1/1:5,15:20:41.59:306,42,0	0/0:24,0:23:39.01:0,39,365	0/1:5,1:6:6.87:7,0,102	0/0:12,0:21:31.92:0,32,164	0/0:9,0:15:13.61:0,14,68	0/0:19,0:19:26.42:0,26,369	0/0:6,0:6:18.02:0,18,170	0/0:13,0:13:18.87:0,19,158	0/0:17,0:20:41.88:0,42,380	0/0:9,0:8:21.03:0,21,204	0/0:7,0:42:76.84:0,77,391	1/1:3,24:28:59.59:437,60,0	0/0:14,1:18:16.60:0,17,275	0/0:5,0:6:5.01:0,5,67	0/0:23,0:22:45.54:0,46,435	1/1:1,4:5:8.93:65,9,0	1/1:1,8:9:17.86:131,18,0	1/1:7,19:26:39.26:317,39,0	0/1:9,2:14:15.03:15,0,198	0/0:15,0:14:24.01:0,24,222	0/0:4,0:7:1.91:0,2,37	0/0:5,0:5:15.02:0,15,146
chr10	87689046	.	TTTG	T	2149.41	PASS	AB=0.980;AC=30;AF=0.536;AN=56;BaseQRankSum=1.529;DP=530;FS=33.281;HRun=0;HaplotypeScore=96.8404;InbreedingCoeff=-0.4360;MQ=40.39;MQ0=99;MQRankSum=-3.267;QD=4.81;ReadPosRankSum=0.872;VQSLOD=0.6923;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:11:17.04:17,0,44	1/1:3,2:2:6.02:76,6,0	0/0:34,0:7:5.34:0,5,45	0/0:39,0:11:14.27:0,14,113	0/1:19,0:15:51.21:54,0,51	0/1:13,0:13:41.11:67,0,41	0/1:14,0:14:17.29:17,0,126	0/1:34,0:27:23:197,0,23	1/1:10,0:6:2.03:45,2,0	1/1:7,21:22:55.62:719,56,0	1/1:5,8:10:12.17:209,12,0	0/0:10,0:9:2.35:0,2,62	0/1:13,0:9:10.53:11,0,96	0/1:7,0:6:1.94:2,0,42	0/1:8,0:3:17.69:22,0,18	0/1:14,0:14:31.52:32,0,126	0/1:13,13:18:48.88:87,0,49	0/1:13,1:12:1.44:74,0,1	0/1:31,0:23:66.60:114,0,67	0/1:18,0:12:20.82:72,0,21	1/1:8,1:5:8.62:49,9,0	0/1:8,0:7:3.78:4,0,66	0/1:20,0:18:59.84:60,0,124	0/1:13,0:13:10.85:11,0,47	0/1:19,0:15:24.53:25,0,61	0/1:30,0:21:89.07:89,0,170	0/1:25,0:20:24.32:162,0,24	0/1:40,0:19:54.40:93,0,54
chr10	87689048	.	TGG	T	5423.37	PASS	AB=0.881;AC=46;AF=0.821;AN=56;BaseQRankSum=-1.513;DP=525;FS=48.766;HRun=2;HaplotypeScore=79.1549;InbreedingCoeff=0.0454;MQ=38.61;MQ0=104;MQRankSum=0.364;QD=11.84;ReadPosRankSum=0.208;VQSLOD=-0.5618;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,3:11:32.24:84,0,32	1/1:5,0:2:6.01:60,6,0	0/0:30,1:6:1.58:0,2,5	0/0:36,0:10:5.76:0,6,94	1/1:8,11:15:1.26:173,1,0	1/1:9,3:12:28.38:284,28,0	0/1:14,0:13:20.12:144,0,20	1/1:16,20:27:59.23:636,59,0	1/1:6,4:6:16.02:142,16,0	1/1:27,0:21:56.51:503,57,0	1/1:14,0:11:24.39:226,24,0	1/1:9,1:9:18.57:141,19,0	1/1:10,3:9:17.05:135,17,0	1/1:4,2:5:8.44:65,8,0	1/1:6,2:3:8.21:67,8,0	1/1:13,1:14:0.55:198,1,0	0/1:25,1:18:33.95:37,0,34	1/1:6,8:12:3.64:132,4,0	1/1:22,10:23:34.75:455,35,0	1/1:12,6:12:14.27:214,14,0	1/1:8,1:4:10.96:72,11,0	0/1:7,2:7:24.94:54,0,25	0/1:14,5:17:22.74:172,0,23	1/1:12,0:12:3.94:91,4,0	1/1:15,5:14:22.49:186,22,0	0/1:26,4:21:5.67:273,0,6	1/1:15,11:20:52.57:566,53,0	1/1:34,6:19:30.42:313,30,0
chr10	87689087	.	T	TC	321.31	PASS	AB=0.798;AC=7;AF=0.130;AN=54;BaseQRankSum=2.498;DP=497;FS=89.290;HRun=0;HaplotypeScore=97.3232;InbreedingCoeff=-0.1137;MQ=40.04;MQ0=116;MQRankSum=-1.755;QD=3.31;ReadPosRankSum=2.770;VQSLOD=-0.7047;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:13:19.48:48,0,19	0/0:6,0:5:15.05:0,15,192	0/0:44,0:10:20.11:0,20,149	0/0:53,0:6:12.67:0,13,84	0/0:16,0:12:16.49:0,16,93	0/1:9,7:15:99:135,0,109	0/1:7,4:8:35.40:84,0,35	0/0:25,0:19:50.93:0,51,307	0/0:6,0:6:10.93:0,11,59	0/0:15,0:10:27.53:0,28,340	0/0:7,0:3:5.98:0,6,60	0/0:8,0:6:12.30:0,12,79	0/0:9,0:7:17:0,17,104	./.	0/0:13,0:10:3.60:0,4,67	0/0:6,0:6:11.85:0,12,78	0/0:15,0:10:24.08:0,24,313	0/1:11,3:11:61.23:61,0,132	0/0:21,0:16:35.23:0,35,269	0/0:19,0:11:24.87:0,25,169	0/0:10,0:3:0.47:0,0,1	0/1:6,4:8:48.31:60,0,48	0/1:11,2:10:20.95:21,0,79	0/1:10,5:13:40.68:41,0,45	0/0:14,0:11:5.76:0,6,93	0/0:22,0:14:36.09:0,36,251	0/0:25,0:22:51.73:0,52,349	0/0:64,0:16:15.72:0,16,92
chr10	87689091	.	TTTTTGG	T	1090.14	PASS	AB=0.871;AC=8;AF=0.148;AN=54;BaseQRankSum=6.529;DP=475;FS=24.966;HRun=0;HaplotypeScore=108.1062;InbreedingCoeff=0.2096;MQ=41.20;MQ0=108;MQRankSum=-1.099;QD=12.25;ReadPosRankSum=2.501;VQSLOD=0.6804;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:14:15.01:0,15,116	0/0:6,0:5:14.97:0,15,147	0/0:47,0:10:18.69:0,19,324	0/0:56,0:6:14.11:0,14,131	0/0:14,0:10:14.87:0,15,146	0/1:8,6:14:13.16:349,0,13	0/1:8,1:6:12.21:115,0,12	0/0:18,0:13:32.11:0,32,378	0/0:6,0:6:5.90:0,6,53	0/0:16,0:11:32.88:0,33,356	0/0:10,0:6:8.91:0,9,90	0/0:9,0:7:12.40:0,12,188	0/0:5,0:5:8.86:0,9,85	./.	0/1:14,0:11:15.63:16,0,155	0/0:7,0:7:12:0,12,115	0/0:13,0:10:26.10:0,26,276	0/1:11,4:12:0.86:231,0,1	0/0:21,0:16:22.71:0,23,168	0/0:19,0:13:17.67:0,18,197	0/0:10,0:3:4.37:0,4,40	0/1:9,1:8:18.16:90,0,18	1/1:10,4:11:7.53:275,8,0	0/1:12,1:11:1.74:146,0,2	0/0:10,0:8:15.01:0,15,211	0/0:19,0:14:17.78:0,18,259	0/0:21,0:19:39.58:0,40,516	0/0:59,0:12:3.01:0,3,36
chr10	87689101	.	T	TCC	154.83	PASS	AB=0.913;AC=5;AF=0.089;AN=56;BaseQRankSum=4.068;DP=377;FS=61.794;HRun=0;HaplotypeScore=91.6991;InbreedingCoeff=-0.0901;MQ=48.98;MQ0=29;MQRankSum=-2.836;QD=2.82;ReadPosRankSum=2.716;VQSLOD=-0.7617;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:2,7:9:13.46:210,0,13	0/0:5,0:5:12.04:0,12,195	0/0:50,0:10:20.47:0,20,211	0/0:63,0:6:6.01:0,6,73	0/0:11,0:11:24.07:0,24,344	0/1:15,0:15:28.96:29,0,136	0/1:9,0:7:9.48:9,0,66	0/0:13,0:13:39.13:0,39,622	0/0:5,0:5:15.04:0,15,206	0/0:11,0:11:30.09:0,30,462	0/0:10,0:10:24.08:0,24,343	0/0:9,0:9:21.07:0,21,318	0/0:4,0:4:9.03:0,9,142	0/0:6,0:6:18.02:0,18,264	0/0:9,0:8:18.06:0,18,282	0/0:5,0:5:12.04:0,12,177	0/0:15,0:12:36.08:0,36,544	0/1:9,0:8:6.28:6,0,73	0/0:13,0:13:36.10:0,36,517	0/0:15,0:13:30.07:0,30,400	0/0:8,0:8:24.02:0,24,323	0/0:12,0:11:9.41:0,9,99	0/1:13,0:13:2.14:2,0,144	0/0:13,0:13:5.22:0,5,108	0/0:7,0:6:18.06:0,18,272	0/0:12,0:12:33.11:0,33,504	0/0:18,0:18:42.09:0,42,627	0/0:7,0:6:6.02:0,6,90
chr10	87689643	.	G	GGTAGTA	2319.73	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-2.112;DP=720;FS=18.153;HRun=0;HaplotypeScore=152.2615;InbreedingCoeff=0.9176;MQ=65.58;MQ0=7;MQRankSum=-6.717;QD=19.01;ReadPosRankSum=-1.635;VQSLOD=1.9691;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:59.50:0,60,961	0/0:16,0:16:24.06:0,24,427	0/0:24,0:15:18.01:0,18,184	0/0:40,0:27:5.06:0,5,80	0/0:29,0:29:24.05:0,24,412	1/1:3,8:14:14.98:411,15,0	1/1:8,12:22:9.03:230,9,0	0/0:36,0:35:36.07:0,36,487	0/0:23,0:23:45.09:0,45,728	0/0:34,0:34:51.89:0,52,943	0/0:16,0:16:24.06:0,24,429	0/0:30,0:30:60.17:0,60,1105	0/0:27,0:27:57.01:0,57,1131	0/0:24,0:24:45.31:0,45,1075	0/0:25,0:28:57.16:0,57,1003	0/0:22,0:22:39.11:0,39,731	0/0:22,0:22:28.83:0,29,715	1/1:3,8:13:8.96:215,9,0	0/0:18,0:17:24.05:0,24,383	0/0:27,0:29:48.06:0,48,884	0/0:48,0:48:96.21:0,96,1651	1/1:10,16:27:30.07:961,30,0	1/1:6,11:19:14.75:479,15,0	1/1:10,13:27:6.02:196,6,0	0/0:25,0:25:36.06:0,36,565	0/0:37,0:37:50.63:0,51,1121	0/0:23,0:23:45.12:0,45,836	0/0:8,0:8:21.07:0,21,399
chr10	87689810	.	C	CCACACACACACA	7261.30	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=2.799;DP=753;FS=4.470;HRun=0;HaplotypeScore=276.6749;InbreedingCoeff=0.9440;MQ=59.24;MQ0=3;MQRankSum=-9.647;QD=33.31;ReadPosRankSum=-3.890;VQSLOD=3.5248;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:48:47.21:0,47,835	1/1:7,0:13:14.87:436,15,0	0/0:28,0:17:17.47:0,17,292	0/0:14,0:8:4.23:0,4,186	0/0:30,0:32:81.25:0,81,2507	1/1:14,1:17:15.05:694,15,0	1/1:28,2:32:18.06:957,18,0	0/0:21,0:22:27.06:0,27,808	0/0:24,0:25:30.20:0,30,1707	1/1:10,0:25:51.14:1115,51,0	1/1:8,0:12:5.64:153,6,0	0/0:30,0:33:72.22:0,72,2227	0/0:41,0:43:79.32:0,79,3283	0/0:32,0:35:72.21:0,72,2132	0/0:30,0:32:55.43:0,55,1672	0/0:17,0:18:42.13:0,42,1239	1/1:20,0:26:27.05:554,27,0	1/1:7,4:14:12.04:707,12,0	0/0:20,0:23:42.10:0,42,1117	0/0:23,0:24:51.16:0,51,1610	0/0:57,0:59:99:0,105,3270	1/1:13,6:22:18.06:939,18,0	1/1:12,4:20:18.06:880,18,0	1/1:29,5:36:13.95:825,14,0	0/0:32,0:34:78.25:0,78,2304	0/0:24,0:27:69.24:0,69,2218	0/0:21,0:22:57.19:0,57,1902	0/0:14,0:14:33.11:0,33,1156
chr10	87691026	.	T	TAGTA	18814.86	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-14.810;DP=744;FS=15.396;HRun=0;HaplotypeScore=114.4149;InbreedingCoeff=0.9997;MQ=87.22;MQ0=0;MQRankSum=-6.148;QD=62.93;ReadPosRankSum=3.730;VQSLOD=5.9532;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:40:87.26:2281,87,0	1/1:3,11:14:33.11:885,33,0	0/0:33,0:33:93.30:0,93,1671	0/0:22,0:22:58.68:0,59,973	0/0:18,0:18:54.19:0,54,1015	1/1:2,21:23:45.15:1215,45,0	1/1:6,23:29:72.25:1926,72,0	0/0:26,0:26:78.27:0,78,1470	0/0:22,0:22:66.23:0,66,1253	1/1:6,39:46:99:3513,135,0	1/1:1,23:24:66.23:1780,66,0	0/0:27,0:27:81.26:0,81,1506	0/0:28,0:28:81.26:0,81,1495	0/0:22,0:22:63.22:0,63,1196	0/0:40,0:40:99:0,111,2092	0/0:29,0:29:81.28:0,81,1538	1/1:1,23:24:66.23:1774,66,0	1/1:5,22:29:69.24:1842,69,0	0/0:21,0:21:63.22:0,63,1196	0/0:19,0:19:54.19:0,54,1025	0/0:23,0:23:66.23:0,66,1245	1/1:5,19:24:45.11:1148,45,0	1/1:6,19:25:57.05:1486,57,0	1/1:2,18:20:36.12:965,36,0	0/0:20,0:20:51.17:0,51,968	0/0:34,1:35:24.32:0,24,1826	0/0:44,0:44:99:0,126,2336	0/0:16,0:16:48.16:0,48,911
chr10	87691341	.	GA	G	954.04	PASS	AB=0.744;AC=15;AF=0.268;AN=56;BaseQRankSum=7.476;DP=573;FS=41.249;HRun=14;HaplotypeScore=72.4116;InbreedingCoeff=0.4887;MQ=70.60;MQ0=3;MQRankSum=1.266;QD=5.18;ReadPosRankSum=4.730;VQSLOD=-0.4845;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:21:33.93:110,34,0	0/0:5,0:5:8.97:0,9,76	0/0:17,0:12:8.46:0,8,54	0/0:12,0:8:1.67:0,2,5	0/1:16,3:20:17.01:17,0,251	1/1:3,8:12:22.84:150,23,0	0/1:7,11:20:17.30:140,0,17	0/0:23,3:26:30.92:0,31,414	0/0:21,1:22:27.41:0,27,377	0/0:23,1:26:25.84:0,26,382	0/0:18,0:21:44.05:0,44,407	0/0:23,3:26:20.09:0,20,440	0/0:20,0:21:35.11:0,35,328	0/0:11,2:13:12.38:0,12,234	0/0:22,2:25:12.02:0,12,400	0/0:23,0:24:23.37:0,23,322	0/0:32,0:34:64.98:0,65,589	1/1:7,14:23:30.79:197,31,0	0/0:19,1:22:38.69:0,39,326	0/0:13,1:14:3.12:0,3,136	0/1:12,2:14:28.58:29,0,165	1/1:3,11:17:23.81:139,24,0	1/1:3,11:15:25.46:169,25,0	0/1:6,21:29:15.91:177,0,16	0/1:10,2:13:9.16:9,0,204	0/0:27,2:30:35.12:0,35,545	0/0:34,0:35:48.31:0,48,434	0/0:12,1:14:15.25:0,15,260
chr10	87692536	.	GGGGTC	G	786.40	PASS	AB=0.962;AC=19;AF=0.339;AN=56;BaseQRankSum=-0.816;DP=371;FS=2.561;HRun=0;HaplotypeScore=53.9011;InbreedingCoeff=-0.1878;MQ=37.32;MQ0=60;MQRankSum=-2.683;QD=5.24;ReadPosRankSum=3.404;VQSLOD=1.1883;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:8:29.75:30,0,66	0/0:3,0:2:3.01:0,3,39	0/0:55,0:5:8.66:0,9,157	0/0:75,0:8:15.26:0,15,368	0/1:26,0:20:93.49:93,0,195	0/0:4,0:3:6.01:0,6,68	0/1:5,4:7:24.13:136,0,24	0/1:10,3:10:92.33:92,0,199	0/1:9,0:8:19.65:20,0,114	0/0:8,0:7:13.59:0,14,163	0/1:11,0:10:41.72:42,0,71	0/1:10,0:7:44.73:68,0,45	0/1:6,0:5:28.51:29,0,68	0/0:3,0:2:5.23:0,5,47	0/0:9,0:8:10.82:0,11,157	0/1:8,0:8:58.22:58,0,131	0/0:14,0:11:23.67:0,24,240	1/1:7,1:6:9.01:99,9,0	0/0:9,0:6:9.31:0,9,152	0/1:6,0:6:4.20:4,0,94	0/1:3,0:3:38.30:38,0,41	0/0:1,0:1:2.99:0,3,23	1/1:3,0:2:3.01:36,3,0	1/1:3,1:3:3.01:68,3,0	0/1:8,0:7:6.28:6,0,121	0/0:8,4:9:4.93:0,5,79	0/1:13,0:12:97.09:123,0,97	0/0:28,0:11:8.87:0,9,140
chr10	87695178	.	C	CA	1156.82	PASS	AB=0.835;AC=20;AF=0.357;AN=56;BaseQRankSum=1.570;DP=520;FS=15.760;HRun=15;HaplotypeScore=74.7225;InbreedingCoeff=0.3915;MQ=53.65;MQ0=17;MQRankSum=-0.511;QD=4.78;ReadPosRankSum=-0.158;VQSLOD=0.4599;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,1:33:30.46:0,30,284	0/0:1,0:3:4.06:0,4,12	0/1:15,0:6:12.30:20,0,12	0/1:11,0:6:4.25:4,0,6	0/0:23,0:25:39.13:0,39,227	1/1:9,10:19:15.45:127,15,0	0/1:14,4:19:23.78:128,0,24	1/1:13,15:29:25.40:275,25,0	0/0:14,0:13:3.35:0,3,119	0/0:4,0:12:12.30:0,12,36	0/0:8,0:18:22.12:0,22,83	0/0:16,0:16:18.23:0,18,109	0/0:18,0:17:30.67:0,31,174	0/0:18,0:18:12.85:0,13,66	0/0:23,1:24:31.41:0,31,180	0/0:17,0:18:23.31:0,23,143	0/0:10,0:26:26.15:0,26,94	1/1:11,7:19:15.94:112,16,0	0/1:9,6:14:1.21:88,0,1	1/1:3,8:11:5.91:149,6,0	1/1:9,3:11:7.35:53,7,0	0/1:10,5:16:21.91:75,0,22	0/1:4,6:10:8.55:42,0,9	1/1:15,8:23:5.35:128,5,0	0/0:19,0:19:13.95:0,14,87	0/0:23,0:26:30.85:0,31,278	0/1:20,5:26:9.20:134,0,9	0/1:14,1:15:2.02:2,0,93
chr10	87695537	.	AAG	A	526.11	PASS	AC=6;AF=0.188;AN=32;BaseQRankSum=3.122;DP=181;FS=2.262;HRun=0;HaplotypeScore=41.3912;InbreedingCoeff=0.8222;MQ=49.14;MQ0=24;MQRankSum=0.670;QD=25.05;ReadPosRankSum=-3.665;VQSLOD=3.0206;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.11:0,63,771	./.	./.	./.	0/0:10,0:9:27.09:0,27,409	./.	0/0:3,0:1:0:0,0,0	1/1:3,9:10:30.07:419,30,0	0/0:13,0:12:33.10:0,33,455	./.	./.	0/0:9,0:7:18.94:0,19,247	0/0:13,0:13:34.65:0,35,462	0/0:13,0:11:33.11:0,33,484	0/0:13,0:11:33.04:0,33,437	0/0:11,0:11:18.75:0,19,402	./.	./.	./.	./.	1/1:6,0:3:9.03:136,9,0	./.	./.	0/0:1,0:1:0.89:0,1,2	0/0:9,0:8:24.08:0,24,379	0/0:22,0:21:63.20:0,63,892	1/1:0,3:3:6.02:87,6,0	0/0:13,0:10:30.10:0,30,436
chr10	87695539	.	G	GA	950.17	PASS	AB=0.789;AC=9;AF=0.250;AN=36;BaseQRankSum=6.821;DP=210;FS=5.052;HRun=2;HaplotypeScore=59.0705;InbreedingCoeff=0.7556;MQ=47.49;MQ0=24;MQRankSum=-3.229;QD=20.22;ReadPosRankSum=-1.727;VQSLOD=3.0671;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:59.86:0,60,708	./.	./.	./.	0/0:10,0:9:27.09:0,27,368	./.	0/0:3,0:1:0:0,0,0	1/1:12,1:11:29.98:340,30,0	0/0:14,0:13:33.10:0,33,441	./.	./.	0/0:11,0:9:24.01:0,24,278	0/0:11,0:11:33.11:0,33,448	0/0:14,0:12:33.11:0,33,459	0/0:11,0:9:24.05:0,24,334	0/0:11,0:11:33.10:0,33,438	./.	./.	1/1:3,0:3:9.02:115,9,0	1/1:6,0:6:6.02:87,6,0	0/1:11,4:12:6.77:221,0,7	./.	./.	0/0:1,0:1:1.25:0,1,3	0/0:11,0:10:24.06:0,24,316	0/0:21,0:20:60.20:0,60,825	1/1:10,0:10:27.05:322,27,0	0/0:13,0:10:30.10:0,30,412
chr10	87695549	.	AAG	A	284.73	PASS	AC=12;AF=0.250;AN=48;BaseQRankSum=3.233;DP=321;FS=1.253;HRun=0;HaplotypeScore=47.5806;InbreedingCoeff=0.7624;MQ=50.45;MQ0=25;MQRankSum=2.765;QD=13.56;ReadPosRankSum=-2.889;VQSLOD=2.8547;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.30:0,90,1311	1/1:2,0:1:3.01:48,3,0	./.	0/0:8,0:8:19.42:0,19,192	0/0:18,0:17:45.14:0,45,655	1/1:1,4:4:6.02:96,6,0	1/1:5,0:3:6.02:96,6,0	0/0:24,0:22:66.22:0,66,952	0/0:17,0:16:45.15:0,45,645	1/1:4,0:2:6.02:90,6,0	1/1:2,0:2:3.01:47,3,0	0/0:10,0:8:21.54:0,22,309	0/0:16,0:16:46.69:0,47,641	0/0:13,0:12:36.09:0,36,488	0/0:20,0:18:51.16:0,51,724	0/0:14,0:13:24.76:0,25,492	1/1:3,0:1:3.01:48,3,0	./.	0/0:6,0:5:13.86:0,14,180	0/0:6,0:6:18.06:0,18,263	0/0:22,0:19:51.12:0,51,705	./.	./.	0/0:1,0:1:2.37:0,2,8	0/0:21,0:20:55.08:0,55,802	0/0:24,0:23:66.16:0,66,879	0/0:13,0:13:36.12:0,36,526	0/0:26,0:24:69.13:0,69,917
chr10	87696474	.	GA	G	280.21	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.305;DP=506;FS=2.993;HRun=1;HaplotypeScore=64.2660;InbreedingCoeff=0.8464;MQ=84.23;MQ0=0;MQRankSum=-2.357;QD=9.04;ReadPosRankSum=-1.701;VQSLOD=0.4845;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,4:31:5.51:360,6,0	0/0:8,0:8:24.08:0,24,321	0/0:24,0:24:61.29:0,61,654	0/0:17,1:18:22.65:0,23,299	0/0:22,0:22:66.09:0,66,818	0/0:18,0:18:32.80:0,33,262	0/0:23,0:23:62.81:0,63,552	0/0:17,0:17:44.99:0,45,413	0/0:22,0:22:60.09:0,60,703	0/0:18,0:18:45.08:0,45,556	0/0:17,0:17:21.31:0,21,499	0/0:24,0:24:68.60:0,69,894	0/0:17,0:17:51.13:0,51,670	0/0:22,1:23:60.16:0,60,762	0/0:30,0:30:84.42:0,84,1038	0/0:18,0:18:49.95:0,50,648	0/0:24,0:24:50.44:0,50,753	0/0:14,0:14:29.85:0,30,253	0/0:11,0:11:32.52:0,33,259	0/0:10,0:10:29.87:0,30,255	0/0:11,0:11:17.95:0,18,143	0/0:12,0:12:20.74:0,21,150	0/0:13,0:13:23.70:0,24,195	0/0:22,0:22:50.81:0,51,437	0/0:12,0:12:36.07:0,36,422	0/0:17,0:17:43.35:0,43,536	0/0:18,0:19:24.58:0,25,155	0/0:10,0:10:30.10:0,30,410
chr10	87698117	.	CA	C	4270.51	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.829;DP=686;FS=2.273;HRun=1;HaplotypeScore=65.4913;InbreedingCoeff=0.9972;MQ=85.61;MQ0=0;MQRankSum=-2.674;QD=38.13;ReadPosRankSum=-1.197;VQSLOD=4.9514;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,148,2337	0/0:7,0:7:21.07:0,21,316	0/0:28,0:28:81.23:0,81,1220	0/0:27,0:26:66.16:0,66,1001	0/0:23,0:23:69.22:0,69,1077	0/0:21,0:21:63.21:0,63,1004	0/0:19,0:19:57.19:0,57,909	1/1:0,25:25:75.22:1013,75,0	0/0:17,0:17:48.16:0,48,764	0/0:31,0:31:93.29:0,93,1440	0/0:16,0:16:48.14:0,48,717	0/0:37,0:37:99:0,111,1699	0/0:31,0:31:93.30:0,93,1452	0/0:22,0:22:66.21:0,66,1032	0/0:45,0:45:99:0,135,2129	0/0:31,0:31:93.32:0,93,1484	0/0:29,0:29:84.25:0,84,1294	0/0:26,0:26:78.27:0,78,1241	1/1:1,17:18:54.18:745,54,0	1/1:0,17:17:39.13:540,39,0	1/1:0,31:31:87.29:1217,87,0	0/0:19,0:19:57.18:0,57,888	0/0:23,0:23:69.24:0,69,1099	0/0:22,0:22:63.21:0,63,1000	0/0:20,0:20:60.20:0,60,959	0/0:25,0:25:75.23:0,75,1155	1/1:0,21:21:54.18:755,54,0	0/0:6,0:6:18.03:0,18,262
chr10	87699206	.	GA	G	4785.30	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.199;DP=663;FS=6.686;HRun=1;HaplotypeScore=66.9293;InbreedingCoeff=0.9957;MQ=82.78;MQ0=0;MQRankSum=-0.898;QD=39.55;ReadPosRankSum=-2.464;VQSLOD=4.3210;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1745	0/0:12,0:12:33.11:0,33,527	0/0:17,0:17:42.09:0,42,603	0/0:19,1:20:37.59:0,38,668	0/0:24,0:24:69.23:0,69,1085	0/0:22,0:22:66.22:0,66,1051	0/0:25,0:25:75.26:0,75,1195	1/1:0,31:31:93.30:1283,93,0	0/0:32,0:32:90.28:0,90,1391	0/0:26,0:26:78.20:0,78,1217	0/0:8,0:8:24.07:0,24,361	0/0:42,0:42:99:0,126,1964	0/0:26,0:26:78.25:0,78,1223	0/0:34,0:34:99:0,99,1555	0/0:21,0:21:60.20:0,60,959	0/0:32,0:32:96.33:0,96,1535	0/0:26,0:26:78.25:0,78,1221	0/0:27,0:27:78.27:0,78,1247	1/1:0,14:14:42.14:581,42,0	1/1:0,14:14:39.13:545,39,0	1/1:0,46:46:99:1719,123,0	0/0:14,0:14:42.13:0,42,641	0/0:22,0:22:60.19:0,60,933	0/0:21,0:21:63.20:0,63,980	0/0:27,0:27:81.28:0,81,1289	0/0:22,0:22:66.22:0,66,1029	1/1:1,15:16:48.15:657,48,0	0/0:5,0:5:15.05:0,15,240
chr10	87699536	.	A	AGT	11373.23	PASS	AB=0.923;AC=21;AF=0.375;AN=56;BaseQRankSum=-13.974;DP=571;FS=8.863;HRun=0;HaplotypeScore=62.4064;InbreedingCoeff=0.9185;MQ=83.45;MQ0=1;MQRankSum=-1.518;QD=48.60;ReadPosRankSum=0.615;VQSLOD=5.5031;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:36:99:1854,99,0	1/1:0,7:7:21.07:392,21,0	0/0:20,0:20:54.15:0,54,757	0/0:16,0:16:30.38:0,30,588	0/0:11,0:11:30.10:0,30,442	0/0:17,0:17:51.16:0,51,731	0/0:21,0:21:63.21:0,63,926	1/1:4,23:27:72.25:1339,72,0	0/0:29,0:29:87.28:0,87,1260	1/1:2,15:17:48.16:879,48,0	1/1:0,5:5:15.05:281,15,0	0/0:33,0:33:99:0,99,1419	0/0:19,0:19:54.18:0,54,795	0/0:20,0:20:60.19:0,60,865	0/0:39,0:39:99:0,114,1678	0/0:27,0:27:75.25:0,75,1104	1/1:1,41:42:99:2244,120,0	0/0:18,0:18:54.17:0,54,774	1/1:5,21:28:72.25:1329,72,0	1/1:0,6:6:15.05:281,15,0	1/1:3,27:30:78.27:1461,78,0	0/0:10,0:10:30.10:0,30,439	0/0:11,0:11:33.10:0,33,467	0/0:22,0:22:63.21:0,63,928	0/0:10,0:10:30.10:0,30,442	0/1:11,1:12:23.10:23,0,409	1/1:0,23:22:69.24:1291,69,0	0/0:14,0:14:42.14:0,42,605
chr10	87699759	.	C	CATT	2428.05	PASS	AC=32;AF=0.667;AN=48;BaseQRankSum=-5.054;DP=284;FS=0.000;HRun=0;HaplotypeScore=42.2046;InbreedingCoeff=0.6711;MQ=73.08;MQ0=1;MQRankSum=-2.082;QD=14.81;ReadPosRankSum=-2.868;VQSLOD=2.4545;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:12:9.50:119,10,0	0/0:7,0:7:12.04:0,12,160	./.	./.	1/1:2,3:5:8.96:134,9,0	0/0:26,0:26:48.14:0,48,623	0/0:1,0:1:3.01:0,3,40	1/1:34,0:33:15.04:256,15,0	1/1:5,3:8:6.02:116,6,0	0/0:8,0:8:6.02:0,6,80	./.	1/1:5,5:10:12.04:232,12,0	1/1:4,1:5:3.01:58,3,0	1/1:0,4:4:12.04:232,12,0	1/1:8,3:11:9.03:174,9,0	1/1:7,3:10:6.02:116,6,0	0/0:26,0:26:34.32:0,34,423	0/0:19,0:19:36.08:0,36,457	1/1:7,1:8:3.01:58,3,0	1/1:6,1:7:3.01:58,3,0	1/1:2,5:7:12.04:232,12,0	./.	0/0:2,0:2:3.01:0,3,40	0/0:5,0:5:3.01:0,3,40	1/1:5,6:11:14.98:250,15,0	1/1:8,0:8:2.96:19,3,0	1/1:8,7:15:21.07:406,21,0	1/1:6,0:9:12:137,12,0
chr10	87701270	.	T	TTTTTG	819.95	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-0.781;DP=490;FS=15.277;HRun=0;HaplotypeScore=101.3478;InbreedingCoeff=0.5610;MQ=68.86;MQ0=5;MQRankSum=-2.715;QD=13.23;ReadPosRankSum=0.552;VQSLOD=1.4274;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,24:35:21.10:911,21,0	0/0:7,0:7:12.18:0,12,99	0/0:41,0:14:11.37:0,11,206	0/1:27,0:9:8.59:9,0,70	0/0:14,0:14:30.41:0,30,367	0/0:14,0:14:28.91:0,29,420	0/0:15,0:15:41.45:0,41,582	0/0:26,0:26:36.43:0,36,482	0/0:12,0:12:31.82:0,32,443	0/0:19,0:19:27.88:0,28,262	0/0:11,0:11:29.86:0,30,238	0/0:23,0:23:49.06:0,49,919	0/0:19,0:19:45.08:0,45,602	0/0:17,0:17:43.30:0,43,584	0/0:19,0:19:51.09:0,51,715	0/0:17,0:17:45.11:0,45,685	0/0:27,0:27:17.60:0,18,202	0/0:27,0:27:77.86:0,78,884	0/0:16,0:16:43.71:0,44,438	0/0:12,0:12:26.90:0,27,284	0/0:6,0:6:6.02:0,6,85	0/0:5,0:5:14.95:0,15,223	0/0:13,0:13:9.86:0,10,339	0/0:17,0:17:47.97:0,48,802	0/0:8,0:8:15.02:0,15,175	0/0:18,0:18:54.11:0,54,711	0/0:15,0:15:35.76:0,36,425	0/0:10,0:10:26.82:0,27,416
chr10	87701275	.	T	TG	1851.08	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-9.240;DP=482;FS=4.766;HRun=0;HaplotypeScore=62.2021;InbreedingCoeff=0.9407;MQ=71.63;MQ0=5;MQRankSum=2.656;QD=24.36;ReadPosRankSum=0.510;VQSLOD=4.7369;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:44.40:0,44,306	0/0:5,0:5:6.72:0,7,46	0/0:43,0:16:27.91:0,28,232	0/0:27,0:9:11.16:0,11,92	0/0:16,0:16:39.84:0,40,385	0/0:11,0:11:33.08:0,33,387	0/0:15,0:15:45.08:0,45,546	1/1:5,22:27:39.65:615,40,0	0/0:12,0:12:32.98:0,33,356	0/0:18,0:18:41.29:0,41,318	0/0:12,0:12:30.86:0,31,220	0/0:23,0:23:69.05:0,69,764	0/0:15,0:15:45.08:0,45,512	0/0:18,0:18:46.34:0,46,521	0/0:17,0:17:51.11:0,51,610	0/0:16,0:16:48.11:0,48,574	0/0:27,0:27:27.64:0,28,231	0/0:27,0:27:78.03:0,78,829	1/1:0,18:18:50.85:520,51,0	1/1:1,10:11:32.96:373,33,0	1/1:0,5:5:6.02:73,6,0	0/0:5,0:5:15.03:0,15,178	0/0:12,0:12:26.73:0,27,290	0/0:16,0:16:48.13:0,48,607	0/0:9,0:9:24.04:0,24,262	0/0:19,0:19:51.84:0,52,554	1/1:0,15:15:36.11:440,36,0	0/0:12,0:12:30.84:0,31,313
chr10	87709707	.	TAA	T	37.83	PASS	AB=0.975;AC=7;AF=0.130;AN=54;BaseQRankSum=6.999;DP=538;FS=0.000;HRun=2;HaplotypeScore=252.1398;InbreedingCoeff=0.1467;MQ=29.65;MQ0=0;MQRankSum=-1.406;QD=0.29;ReadPosRankSum=2.636;VQSLOD=-0.7646;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,1:30:17.18:0,17,58	0/0:11,0:11:4.57:0,5,128	./.	0/0:1,0:1:3.01:0,3,61	0/0:9,1:10:1.83:0,2,3	0/0:17,0:17:6.01:0,6,64	0/0:20,0:20:5.93:0,6,45	0/0:27,0:27:48.68:0,49,1117	0/0:24,1:25:31.23:0,31,221	0/1:35,0:35:42.77:43,0,655	0/0:10,0:10:2.27:0,2,5	0/0:38,0:38:38.35:0,38,247	0/0:30,0:30:21.17:0,21,294	0/0:27,0:27:34.11:0,34,187	0/1:42,0:42:52.86:53,0,92	0/0:34,0:34:21.46:0,21,171	0/0:13,0:13:7.52:0,8,159	0/0:10,0:10:16.98:0,17,310	0/1:10,1:10:6.57:7,0,368	0/0:14,0:14:2.34:0,2,5	0/0:15,1:16:22.82:0,23,227	0/0:25,1:24:4.58:0,5,8	0/0:16,0:16:5.27:0,5,13	0/0:9,1:10:2.60:0,3,10	0/1:23,1:24:1.01:3,0,1	0/0:18,0:18:10.57:0,11,423	0/1:17,0:17:8.59:9,0,421	1/1:0,1:1:3.01:35,3,0
chr10	87709713	.	T	TGA	182.80	PASS	AB=0.965;AC=18;AF=0.333;AN=54;BaseQRankSum=3.534;DP=620;FS=0.000;HRun=0;HaplotypeScore=300.8407;InbreedingCoeff=-0.0730;MQ=33.24;MQ0=0;MQRankSum=-0.118;QD=0.53;ReadPosRankSum=-2.701;VQSLOD=1.5410;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:5.59:6,0,24	0/1:12,0:13:6.92:7,0,107	./.	0/0:5,0:4:5.61:0,6,55	1/1:15,0:15:0.12:1,0,0	0/0:18,0:18:1.30:0,1,30	0/1:23,0:23:9.42:9,0,36	0/0:29,0:29:24.95:0,25,761	0/0:26,0:26:27.71:0,28,264	0/1:41,0:41:34.46:34,0,512	0/0:13,0:14:3.20:0,3,26	0/0:40,0:41:21.31:0,21,231	0/1:33,0:35:15.68:16,0,341	0/0:27,0:29:25.38:0,25,248	0/1:44,1:45:61.77:62,0,86	0/0:38,1:39:4.31:0,4,204	0/0:14,0:14:20.14:0,20,187	0/0:13,0:13:9.35:0,9,289	0/1:12,2:13:21.76:22,0,259	0/0:18,0:18:5.21:0,5,25	0/0:21,0:21:14.69:0,15,183	1/1:28,0:27:0.65:2,1,0	0/1:16,0:16:0.70:1,0,1	1/1:14,0:14:0.89:2,1,0	1/1:25,0:25:1.12:5,1,0	0/1:17,1:18:99:117,0,241	0/1:20,2:22:26.59:27,0,274	0/0:5,0:5:2.50:0,2,9
chr10	87709714	.	GTGCGC	G	1448.58	PASS	AB=0.999;AC=26;AF=0.481;AN=54;BaseQRankSum=4.269;DP=627;FS=5.235;HRun=0;HaplotypeScore=307.3448;InbreedingCoeff=-0.2514;MQ=33.21;MQ0=0;MQRankSum=-0.701;QD=3.01;ReadPosRankSum=-1.972;VQSLOD=1.2980;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:3.20:3,0,37	0/1:13,0:13:16.38:16,0,189	./.	0/0:7,0:5:8.38:0,8,95	0/0:15,0:15:2.01:0,2,19	0/1:18,0:18:0.63:1,0,50	0/1:23,0:23:46.64:47,0,47	0/1:30,0:30:97.35:97,0,1137	0/0:26,0:26:22.51:0,23,372	0/1:41,1:42:99:700,0,569	0/1:14,0:14:15.78:16,0,27	0/0:41,0:41:24.13:0,24,354	0/1:35,0:35:15.05:15,0,548	0/0:29,0:29:1.40:0,1,339	0/1:46,0:46:26.09:26,0,149	0/1:39,0:39:16.79:17,0,304	0/1:14,0:14:14.50:14,0,280	0/1:14,0:14:84.85:85,0,487	0/1:14,0:13:25.89:26,0,410	1/1:16,2:18:4.13:18,4,0	0/0:22,0:22:10.63:0,11,259	1/1:23,6:27:3.50:9,3,0	1/1:12,4:16:4.23:26,4,0	0/1:14,0:14:0:0,0,0	1/1:20,5:25:3.67:11,4,0	0/1:18,0:18:99:237,0,413	0/1:22,0:22:99:185,0,423	1/1:5,0:5:5.98:47,6,0
chr10	87709715	.	TGCG	T	587.06	PASS	AB=0.988;AC=19;AF=0.352;AN=54;BaseQRankSum=6.577;DP=633;FS=7.674;HRun=0;HaplotypeScore=303.7674;InbreedingCoeff=-0.0512;MQ=33.19;MQ0=0;MQRankSum=-2.370;QD=1.75;ReadPosRankSum=-0.969;VQSLOD=1.1224;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:3.19:3,0,45	0/1:13,0:13:7.64:8,0,162	./.	0/0:8,0:6:6.82:0,7,77	0/0:15,0:15:1.93:0,2,15	0/1:18,0:18:0.04:0,0,47	0/1:23,0:23:11.42:11,0,49	0/0:31,0:31:9.14:0,9,1098	0/0:26,0:26:24.36:0,24,423	0/1:40,3:43:99:334,0,474	0/1:13,1:14:4.67:5,0,40	0/0:41,0:41:24.76:0,25,405	0/0:36,0:36:9.16:0,9,545	0/0:29,0:29:15.13:0,15,401	0/1:46,0:46:99:113,0,167	0/0:39,0:39:6.71:0,7,365	0/0:13,0:14:4.96:0,5,304	0/1:14,0:14:26.54:27,0,446	0/1:14,0:13:19.73:20,0,378	1/1:18,0:18:2.29:7,2,0	0/0:22,0:22:14.93:0,15,283	1/1:29,0:27:0.75:5,1,0	0/0:17,0:17:1.68:0,2,6	0/0:14,0:14:0:0,0,0	1/1:26,0:26:3.47:19,3,0	0/1:18,0:18:51.57:52,0,395	0/1:22,0:22:93.95:94,0,364	1/1:5,0:5:5.57:30,6,0
chr10	87709716	.	GCGC	G	1649.85	PASS	AB=0.923;AC=29;AF=0.537;AN=54;BaseQRankSum=4.956;DP=638;FS=3.608;HRun=0;HaplotypeScore=301.5541;InbreedingCoeff=-0.3103;MQ=33.22;MQ0=0;MQRankSum=-2.266;QD=3.12;ReadPosRankSum=-1.858;VQSLOD=2.0442;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:33:3.20:3,0,29	0/1:10,3:13:35.78:36,0,121	./.	0/1:9,0:7:12.60:13,0,34	1/1:12,3:15:1.19:4,1,0	0/1:14,4:18:0.04:0,0,31	0/1:22,1:23:26.12:28,0,26	0/1:27,3:31:99:104,0,684	0/0:25,1:26:24.35:0,24,310	0/1:43,1:44:99:653,0,291	0/1:12,2:14:5.37:5,0,19	0/0:39,2:41:23.33:0,23,283	0/1:31,4:36:26.06:26,0,362	0/1:27,2:29:2.41:2,0,265	0/1:40,6:46:99:164,0,117	0/1:36,3:39:16.40:16,0,242	0/1:13,0:14:12.50:12,0,195	0/1:13,2:15:99:105,0,283	0/1:14,0:13:54.72:55,0,234	1/1:17,1:18:2.04:7,2,0	0/0:23,0:23:14.92:0,15,182	1/1:24,5:27:0.75:5,1,0	1/1:13,4:17:2.34:6,2,0	0/0:12,2:14:0:0,0,0	1/1:24,2:26:3.47:19,3,0	0/1:17,1:18:99:198,0,258	0/1:22,0:22:99:243,0,239	1/1:6,0:6:8.98:87,9,0
chr10	87709723	.	GTC	G	308.65	PASS	AB=0.926;AC=13;AF=0.232;AN=56;BaseQRankSum=9.772;DP=757;FS=10.688;HRun=0;HaplotypeScore=357.0054;InbreedingCoeff=-0.2070;MQ=34.62;MQ0=0;MQRankSum=-6.575;QD=0.92;ReadPosRankSum=2.197;VQSLOD=0.9273;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,1:34:1.67:2,0,39	0/1:14,1:15:3.72:4,0,150	0/0:12,0:8:13.87:0,14,241	0/0:13,0:9:17.65:0,18,242	0/0:14,1:15:2.45:0,2,48	0/0:13,2:18:0.57:0,1,14	0/1:25,2:27:17.09:17,0,91	0/0:37,1:41:49.27:0,49,1332	0/0:28,2:31:31.76:0,32,415	0/1:43,5:50:99:217,0,776	0/1:19,0:20:2.42:2,0,109	0/0:41,4:47:27.57:0,28,347	0/0:36,5:44:8.08:0,8,579	0/0:28,5:34:22.62:0,23,473	0/1:39,0:51:20.47:20,0,172	0/0:31,7:45:1.40:0,1,375	0/0:17,0:18:20.10:0,20,270	0/0:16,0:17:8.86:0,9,443	0/0:21,0:20:49.21:0,49,667	0/1:16,1:20:17.24:17,0,71	0/0:27,0:27:31.27:0,31,517	1/1:29,2:29:0.65:3,1,0	0/0:21,0:21:4.41:0,4,55	0/0:16,0:18:6:0,6,79	0/1:29,0:29:3.67:4,0,20	0/1:20,3:23:69.78:70,0,497	0/1:24,3:27:68.79:69,0,340	0/1:7,0:7:12.75:13,0,90
chr10	87709774	.	A	AG	20238.70	PASS	AB=0.958;AC=53;AF=0.946;AN=56;BaseQRankSum=-4.861;DP=961;FS=1.097;HRun=1;HaplotypeScore=389.5370;InbreedingCoeff=0.7266;MQ=48.75;MQ0=3;MQRankSum=-1.262;QD=21.90;ReadPosRankSum=3.925;VQSLOD=3.1436;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,49:52:62.99:996,63,0	1/1:5,11:18:31.51:386,32,0	0/1:22,1:6:5.82:6,0,114	0/0:35,0:15:28.10:0,28,234	1/1:9,21:30:26.89:414,27,0	1/1:2,16:18:18.03:276,18,0	1/1:5,24:29:36.01:512,36,0	1/1:6,22:28:80.80:1166,81,0	1/1:3,28:31:44.95:718,45,0	1/1:14,38:57:99:2122,159,0	1/1:5,21:30:24.15:375,24,0	1/1:4,42:46:35.75:563,36,0	1/1:8,34:44:65.44:967,65,0	1/1:3,23:29:18.06:288,18,0	1/1:6,41:48:44.90:633,45,0	1/1:7,31:40:60.11:828,60,0	1/1:2,22:25:54.34:791,54,0	1/1:0,25:25:69.23:1084,69,0	1/1:1,13:15:42.13:648,42,0	1/1:8,19:31:44.84:648,45,0	1/1:4,51:54:99:1560,99,0	1/1:11,30:40:26.31:396,26,0	1/1:9,22:31:26.89:388,27,0	1/1:3,35:38:50.98:815,51,0	1/1:18,30:49:42.67:604,43,0	1/1:9,28:37:99:1456,102,0	1/1:7,28:37:72.09:1022,72,0	1/1:4,12:16:42.23:580,42,0
chr10	87710774	.	C	CG	9840	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-13.790;DP=755;FS=6.457;HRun=3;HaplotypeScore=76.6665;InbreedingCoeff=0.9912;MQ=79.98;MQ0=0;MQRankSum=-2.213;QD=36.04;ReadPosRankSum=-2.409;VQSLOD=4.3516;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,40:42:99:1553,111,0	1/1:1,14:15:36.12:503,36,0	0/0:23,0:23:45.58:0,46,514	0/0:14,0:14:36.07:0,36,395	0/0:20,0:20:51.15:0,51,611	0/0:28,0:28:75.17:0,75,862	0/0:35,0:35:99:0,99,1171	1/1:3,22:25:54.11:670,54,0	0/0:21,0:21:57.13:0,57,667	1/1:1,22:23:66.21:908,66,0	1/1:1,12:13:33.11:462,33,0	0/0:48,0:48:99:0,135,1606	0/0:29,0:29:87.27:0,87,1042	0/0:36,0:36:99:0,102,1223	0/0:33,0:33:90.27:0,90,1079	0/0:26,0:26:72.22:0,72,864	1/1:1,41:42:99:1470,105,0	0/0:44,0:44:99:0,129,1545	1/1:1,17:18:51.14:692,51,0	1/1:1,13:14:39.09:522,39,0	1/1:1,50:51:99:1931,138,0	0/0:16,0:16:39.12:0,39,468	0/0:12,0:12:33.10:0,33,396	0/0:47,0:47:99:0,120,1426	0/0:23,0:23:60.13:0,60,691	0/0:23,0:23:69.21:0,69,826	1/1:1,29:29:81.27:1131,81,0	0/0:4,0:4:9.03:0,9,108
chr10	87713702	.	GC	G	8633.89	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=0.864;DP=351;FS=0.000;HRun=4;HaplotypeScore=36.0651;InbreedingCoeff=0.3826;MQ=46.18;MQ0=5;MQRankSum=0.207;QD=25.10;ReadPosRankSum=2.237;VQSLOD=3.2725;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:21.06:251,21,0	1/1:0,8:8:24.07:284,24,0	0/1:9,0:2:16.94:27,0,17	0/0:7,0:1:3.01:0,3,37	1/1:1,16:17:39.12:467,39,0	1/1:0,9:9:18.06:216,18,0	1/1:0,14:12:27.08:323,27,0	1/1:2,10:10:27.08:323,27,0	1/1:2,9:9:21.06:252,21,0	1/1:0,14:13:39.12:466,39,0	1/1:0,15:15:36.11:431,36,0	1/1:0,10:10:24.07:286,24,0	1/1:0,7:7:21.06:252,21,0	1/1:0,13:12:27.08:324,27,0	1/1:0,15:14:33.10:393,33,0	1/1:1,15:16:39.12:466,39,0	1/1:2,17:17:27.08:324,27,0	1/1:4,14:17:33.10:396,33,0	1/1:2,8:9:21.06:250,21,0	1/1:0,14:14:36.11:429,36,0	1/1:1,3:4:3.01:36,3,0	1/1:1,16:17:30.09:356,30,0	1/1:0,11:11:21.06:252,21,0	1/1:0,8:8:9.03:108,9,0	1/1:0,17:17:51.16:611,51,0	1/1:0,20:19:54.16:647,54,0	1/1:1,11:11:24.07:285,24,0	1/1:1,11:11:15.05:180,15,0
chr10	87713961	.	A	ATG	11554.39	PASS	AB=0.939;AC=21;AF=0.375;AN=56;BaseQRankSum=-16.501;DP=797;FS=0.610;HRun=0;HaplotypeScore=91.8642;InbreedingCoeff=0.9105;MQ=76.98;MQ0=0;MQRankSum=-7.649;QD=35.23;ReadPosRankSum=-1.645;VQSLOD=6.4833;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,43:47:99:1771,105,0	1/1:2,5:7:18.06:303,18,0	0/0:29,0:30:63.31:0,63,788	0/0:28,0:29:41.03:0,41,778	0/0:26,0:26:66.20:0,66,833	0/0:19,0:18:45.15:0,45,579	0/0:34,0:34:87.27:0,87,1103	1/1:8,30:38:90.31:1509,90,0	0/0:28,0:28:81.26:0,81,1042	1/1:1,29:31:81.26:1338,81,0	1/1:1,17:18:51.17:860,51,0	0/0:45,0:45:99:0,117,1505	0/0:35,0:35:90.27:0,90,1142	0/0:38,0:38:99:0,99,1274	0/0:49,0:49:99:0,132,1670	0/0:26,0:26:54.16:0,54,681	1/1:8,23:32:66.23:1108,66,0	0/0:19,0:19:48.11:0,48,599	1/1:3,19:23:60.17:936,60,0	1/1:3,16:19:39.13:658,39,0	1/1:10,53:63:99:2255,135,0	0/0:28,0:28:66.20:0,66,835	0/0:14,0:14:36.12:0,36,463	0/0:25,0:25:57.19:0,57,734	0/0:18,0:18:48.15:0,48,617	0/1:29,2:31:14.01:14,0,955	1/1:2,17:19:48.16:804,48,0	0/0:6,0:6:6.02:0,6,77
chr10	87714820	.	G	GC	87.51	PASS	AB=0.948;AC=7;AF=0.125;AN=56;BaseQRankSum=4.824;DP=442;FS=11.299;HRun=0;HaplotypeScore=131.4282;InbreedingCoeff=-0.0564;MQ=37.06;MQ0=6;MQRankSum=-4.387;QD=0.98;ReadPosRankSum=1.249;VQSLOD=1.9160;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:15.01:0,15,173	0/0:3,0:3:3.01:0,3,39	0/0:6,0:2:6.02:0,6,81	0/0:9,0:7:18.06:0,18,243	0/0:15,0:14:6.02:0,6,83	0/1:13,0:13:14.82:15,0,94	0/0:19,0:19:18.05:0,18,228	0/1:21,6:26:99:145,0,348	0/0:14,0:14:14.53:0,15,165	0/0:23,0:19:49.84:0,50,504	0/0:7,0:7:9.01:0,9,103	0/0:35,0:35:38.45:0,38,438	0/0:17,0:17:9.23:0,9,225	0/0:13,0:13:5.97:0,6,49	0/0:15,0:15:14.91:0,15,174	0/0:12,0:12:8.81:0,9,106	0/0:28,0:27:4.56:0,5,289	0/0:15,0:15:4.60:0,5,311	0/1:11,1:10:20.31:20,0,230	0/1:11,0:10:1.71:2,0,37	0/1:24,0:21:8.21:8,0,129	0/0:12,0:12:9.46:0,9,103	0/0:16,0:15:14.62:0,15,184	0/0:22,1:23:6:0,6,66	0/0:12,0:12:5.96:0,6,67	0/0:19,0:19:42.44:0,42,411	0/0:13,0:13:24.04:0,24,272	1/1:2,0:2:0.47:1,0,0
chr10	87714823	.	C	CTGG	645.93	PASS	AB=0.985;AC=11;AF=0.204;AN=54;BaseQRankSum=6.767;DP=403;FS=15.240;HRun=0;HaplotypeScore=128.9876;InbreedingCoeff=-0.0891;MQ=35.75;MQ0=5;MQRankSum=-1.685;QD=4.28;ReadPosRankSum=4.060;VQSLOD=1.6701;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:13.66:0,14,137	./.	0/0:4,0:2:6.02:0,6,72	0/0:7,0:5:11.62:0,12,109	0/0:15,0:14:5.63:0,6,65	0/1:12,0:12:7.15:7,0,15	0/0:16,0:16:7.98:0,8,92	0/1:24,1:24:99:475,0,119	0/0:14,0:14:6.56:0,7,117	0/0:23,0:19:0.25:0,0,155	0/0:6,0:6:2.12:0,2,17	0/1:30,1:31:16.11:16,0,173	0/0:16,0:16:14.32:0,14,204	1/1:13,0:13:1.71:5,2,0	0/1:14,0:14:0.02:0,0,55	0/0:12,0:12:4.79:0,5,59	0/1:26,1:26:98.59:99,0,123	0/0:12,0:12:18.51:0,19,212	0/1:8,0:7:64.66:65,0,102	0/0:9,0:8:5.69:0,6,52	0/0:18,2:17:0.88:0,1,42	0/0:10,0:10:5.74:0,6,61	0/0:14,0:13:10.81:0,11,137	0/0:23,0:23:1.36:0,1,39	0/0:11,1:12:2.01:0,2,40	0/1:18,0:18:90.38:90,0,110	0/0:10,0:10:11.69:0,12,107	1/1:3,0:3:2.60:10,3,0
chr10	87714829	.	T	TG	1296.78	PASS	AC=50;AF=1.000;AN=50;BaseQRankSum=-2.391;DP=340;FS=3.846;HRun=1;HaplotypeScore=107.9926;InbreedingCoeff=0.0166;MQ=32.87;MQ0=1;MQRankSum=-0.490;QD=3.85;ReadPosRankSum=-1.737;VQSLOD=-0.2990;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,3:20:5.54:28,6,0	./.	./.	./.	1/1:10,2:12:2.99:24,3,0	1/1:8,2:10:10.23:51,10,0	1/1:11,8:19:2.97:20,3,0	1/1:16,3:18:33.17:189,33,0	1/1:12,5:17:2.94:18,3,0	1/1:16,3:15:37.47:247,37,0	1/1:5,1:6:5.66:47,6,0	1/1:23,4:27:14.54:92,15,0	1/1:11,3:14:2.74:12,3,0	1/1:11,2:13:4.80:27,5,0	1/1:11,4:15:2.97:20,3,0	1/1:9,6:15:5.95:42,6,0	1/1:16,6:21:12.95:68,13,0	1/1:7,0:7:2.98:21,3,0	1/1:3,0:3:2.12:28,2,0	1/1:3,2:5:2.22:7,2,0	1/1:9,7:13:10.48:56,10,0	1/1:8,2:10:3:25,3,0	1/1:9,1:9:2.46:23,2,0	1/1:15,5:20:1.82:5,2,0	1/1:6,4:10:2.22:7,2,0	1/1:12,3:15:37.63:241,38,0	1/1:9,0:9:8.87:60,9,0	1/1:0,4:4:2.90:16,3,0
chr10	87714915	.	A	ATG	11168.07	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-8.680;DP=672;FS=3.041;HRun=0;HaplotypeScore=142.3358;InbreedingCoeff=0.9973;MQ=80.57;MQ0=0;MQRankSum=0.037;QD=45.21;ReadPosRankSum=-1.959;VQSLOD=4.7973;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,31:42:84.27:1474,84,0	1/1:1,8:9:24.08:410,24,0	0/0:26,0:26:74.26:0,74,973	0/0:32,0:30:76.84:0,77,1021	0/0:16,0:15:33.02:0,33,401	0/0:18,0:18:54.18:0,54,749	0/0:22,0:21:60.20:0,60,819	1/1:4,27:31:87.29:1535,87,0	0/0:30,0:30:84.28:0,84,1167	1/1:6,20:26:68.62:1115,69,0	1/1:3,16:19:51:883,51,0	0/0:49,0:49:99:0,135,1789	0/0:16,0:16:45.13:0,45,595	0/0:19,0:19:46.47:0,46,593	0/0:23,0:23:66.35:0,66,798	0/0:32,0:31:93.31:0,93,1286	1/1:1,25:27:75.26:1346,75,0	0/0:13,0:13:36.09:0,36,483	1/1:4,24:28:81.26:1422,81,0	1/1:1,19:20:57.18:986,57,0	1/1:3,24:27:62.90:1109,63,0	0/0:14,0:14:39.04:0,39,501	0/0:15,0:15:39.04:0,39,496	0/0:30,0:30:74.71:0,75,984	0/0:31,0:31:87.02:0,87,1119	0/0:32,0:32:96.27:0,96,1318	1/1:0,18:18:51.17:888,51,0	0/0:7,0:7:15.05:0,15,210
chr10	87715140	.	CAAGAAAGAAAGA	C	1041.88	PASS	AB=1.000;AC=5;AF=0.093;AN=54;BaseQRankSum=2.065;DP=598;FS=1.065;HRun=0;HaplotypeScore=204.6744;InbreedingCoeff=0.7547;MQ=59.11;MQ0=9;MQRankSum=-0.369;QD=25.41;ReadPosRankSum=1.883;VQSLOD=3.0933;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:27.09:0,27,534	0/0:9,0:9:9.03:0,9,270	./.	0/1:14,0:12:0:0,0,0	0/0:16,0:16:21.07:0,21,842	0/0:23,0:21:27.08:0,27,903	0/0:14,0:14:18.06:0,18,399	0/0:27,0:20:6.01:0,6,60	0/0:33,0:33:42.14:0,42,1947	0/0:22,0:22:30.10:0,30,727	0/0:14,0:13:24.08:0,24,660	0/0:41,0:41:60.21:0,60,2685	0/0:26,0:26:39.13:0,39,1954	0/0:20,0:20:18.06:0,18,920	0/0:20,0:20:36.12:0,36,1984	0/0:23,0:23:42.14:0,42,2391	0/0:31,0:31:49.52:0,50,1276	0/0:16,0:12:16.30:0,16,318	0/0:20,0:19:18.06:0,18,614	0/0:19,0:18:33.11:0,33,901	0/0:15,0:15:3.01:0,3,71	0/0:20,0:20:12.04:0,12,384	0/0:22,0:20:33.11:0,33,931	0/0:20,0:19:24.08:0,24,587	0/0:26,0:27:51.18:0,51,2828	1/1:9,12:21:33.09:848,33,0	0/0:31,0:28:21.07:0,21,626	1/1:1,5:6:9.03:306,9,0
chr10	87715210	.	A	AAG	8798.21	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=10.816;DP=738;FS=12.653;HRun=0;HaplotypeScore=126.4270;InbreedingCoeff=0.9174;MQ=63.46;MQ0=7;MQRankSum=-2.119;QD=31.53;ReadPosRankSum=-0.306;VQSLOD=5.7709;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,16:18:40.36:633,40,0	1/1:1,6:8:14.71:333,15,0	0/0:41,0:26:67.50:0,68,764	0/0:31,0:16:14.05:0,14,311	0/0:17,0:16:48.11:0,48,622	0/0:32,0:30:45.51:0,46,901	0/0:18,0:18:48.12:0,48,623	1/1:11,31:43:99:1561,102,0	0/0:33,0:33:93.27:0,93,1227	1/1:6,24:29:78:1240,78,0	1/1:1,13:14:33.11:569,33,0	0/0:34,0:34:97.51:0,98,1220	0/0:30,0:30:85.49:0,85,1084	0/0:20,0:20:60.18:0,60,793	0/0:34,0:34:99:0,102,1355	0/0:27,0:27:72.19:0,72,903	1/1:10,30:39:82.60:1346,83,0	0/1:22,0:19:56.46:56,0,465	1/1:6,16:22:54.13:847,54,0	1/1:5,19:24:53.50:802,54,0	1/1:5,14:19:20.92:506,21,0	0/0:21,0:21:51.13:0,51,678	0/0:20,0:18:23.50:0,23,534	0/0:26,0:25:45.40:0,45,881	0/0:32,0:32:95.65:0,96,1164	0/0:31,1:32:38.20:0,38,1011	1/1:11,21:29:56.81:906,57,0	0/0:11,0:11:33.11:0,33,451
chr10	87715215	.	A	AG	2353.08	PASS	AB=0.991;AC=14;AF=0.250;AN=56;BaseQRankSum=16.096;DP=731;FS=7.280;HRun=1;HaplotypeScore=131.1723;InbreedingCoeff=0.3033;MQ=65.32;MQ0=5;MQRankSum=-3.101;QD=8.72;ReadPosRankSum=3.280;VQSLOD=1.1606;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:17:9.89:227,10,0	1/1:8,0:8:18.60:108,19,0	0/0:42,0:28:73.93:0,74,856	0/0:32,0:17:35.76:0,36,412	0/0:18,0:17:51.13:0,51,679	0/0:30,2:30:23.04:0,23,910	0/0:18,0:18:48.12:0,48,632	0/1:36,0:36:13:392,0,13	0/0:33,0:33:96.31:0,96,1309	0/1:30,0:29:22.77:342,0,23	0/1:15,0:14:7.84:150,0,8	0/0:34,0:34:99:0,101,1303	0/0:31,0:31:91.82:0,92,1184	0/0:20,0:20:60.18:0,60,803	0/0:35,0:35:99:0,105,1406	0/0:25,0:25:72.21:0,72,945	1/1:31,3:34:78.56:476,79,0	0/1:23,0:19:31.56:32,0,487	0/1:24,1:25:99:180,0,195	0/1:27,0:26:1.29:245,0,1	0/1:22,0:22:45.57:133,0,46	0/0:19,1:20:54.14:0,54,722	0/0:17,1:17:23.50:0,24,540	0/0:28,0:27:47.89:0,48,927	0/0:32,0:32:89.78:0,90,1175	0/0:32,0:32:75.76:0,76,1109	0/1:30,1:28:29.29:242,0,29	0/0:11,0:11:33.11:0,33,458
chr10	87716000	.	GGCACT	G	3544.38	PASS	AB=0.950;AC=9;AF=0.161;AN=56;BaseQRankSum=11.219;DP=735;FS=6.442;HRun=0;HaplotypeScore=137.9089;InbreedingCoeff=0.8609;MQ=73.09;MQ0=0;MQRankSum=-7.153;QD=38.95;ReadPosRankSum=0.569;VQSLOD=3.0485;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:50:99:0,144,4290	1/1:1,10:11:33.11:691,33,0	0/0:10,0:10:23.93:0,24,515	0/0:15,0:15:33.08:0,33,776	0/0:16,0:16:42.13:0,42,1227	0/0:18,0:18:54.19:0,54,1654	0/0:49,0:49:99:0,147,4311	0/0:39,0:39:99:0,99,2774	0/0:36,0:36:96.33:0,96,2912	1/1:3,21:24:63.16:1190,63,0	1/1:0,7:7:8.49:145,8,0	0/0:39,0:39:99:0,114,3404	0/0:28,0:28:81.28:0,81,2461	0/0:42,0:42:99:0,126,3829	0/0:34,0:34:99:0,99,3022	0/0:35,0:35:99:0,102,3151	1/1:2,28:30:72.25:1509,72,0	0/0:33,0:33:93.32:0,93,2883	0/0:13,0:13:33.11:0,33,1014	0/0:9,0:9:27.09:0,27,818	0/0:76,0:76:99:0,211,6217	0/0:14,0:14:39.12:0,39,1126	0/0:7,0:7:18.06:0,18,558	0/0:27,0:26:78.27:0,78,2395	0/0:21,0:21:57.20:0,57,1700	0/1:18,1:19:8.77:9,0,1378	0/0:14,0:14:39.13:0,39,1149	0/0:18,0:18:54.15:0,54,1535
chr10	87720932	.	CGT	C	359.91	PASS	AB=0.928;AC=14;AF=0.259;AN=54;BaseQRankSum=4.556;DP=578;FS=2.496;HRun=0;HaplotypeScore=67.9078;InbreedingCoeff=-0.2772;MQ=66.66;MQ0=11;MQRankSum=-0.218;QD=1.17;ReadPosRankSum=2.315;VQSLOD=1.2884;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:25:8.97:0,9,71	0/0:5,0:5:2.97:0,3,20	0/0:26,0:16:0:0,0,0	0/1:36,0:26:0:0,0,0	0/1:11,0:10:28.78:29,0,36	0/1:11,3:14:17.20:17,0,141	0/1:37,1:38:53.30:53,0,135	0/0:23,0:23:2.98:0,3,21	0/0:13,0:13:2.99:0,3,24	0/0:17,0:15:9.43:0,9,70	0/0:14,0:14:5.85:0,6,58	0/0:31,0:30:17.98:0,18,162	0/1:8,0:8:0.54:1,0,78	0/0:16,0:15:17.98:0,18,182	0/1:9,1:10:20.45:20,0,99	0/1:19,2:21:37.74:38,0,242	0/1:38,6:44:99:133,0,225	0/1:25,3:28:71.48:71,0,154	0/0:20,0:19:12.04:0,12,171	./.	0/1:46,0:45:7.01:7,0,140	0/1:10,1:10:23.23:23,0,53	0/0:9,0:9:14.84:0,15,184	0/0:28,0:39:24:0,24,237	0/1:8,4:12:12.94:85,0,13	0/0:21,0:20:19.01:0,19,174	0/1:15,1:14:11.25:11,0,161	0/1:11,0:10:4.87:5,0,73
chr10	87723128	.	ACT	A	5292.28	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.413;DP=642;FS=4.400;HRun=0;HaplotypeScore=79.0549;InbreedingCoeff=0.9861;MQ=81.25;MQ0=0;MQRankSum=-1.654;QD=34.14;ReadPosRankSum=4.396;VQSLOD=6.9310;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,160,2829	0/0:4,0:4:9.03:0,9,152	0/0:17,0:17:45.13:0,45,754	0/0:16,0:16:33.10:0,33,567	0/0:18,0:18:54.13:0,54,882	1/1:2,28:30:72.24:1008,72,0	1/1:2,28:30:60.20:840,60,0	0/0:40,0:40:99:0,114,2013	0/0:15,0:15:42.14:0,42,756	0/0:18,0:18:54.19:0,54,967	0/0:12,0:12:36.11:0,36,599	0/0:29,0:29:84.29:0,84,1509	0/0:16,0:16:45.14:0,45,761	0/0:28,0:28:81.28:0,81,1425	0/0:36,0:36:99:0,105,1833	0/0:23,0:23:69.22:0,69,1213	0/0:30,0:30:84.29:0,84,1497	1/1:2,25:27:69.23:965,69,0	0/0:20,0:20:45.15:0,45,798	0/0:10,0:10:24.03:0,24,371	0/0:40,0:40:99:0,120,2122	1/1:1,17:18:51.17:714,51,0	1/1:0,14:14:32.85:462,33,0	1/1:2,34:36:93.31:1302,93,0	0/0:13,0:13:39.13:0,39,702	0/0:17,0:17:39.13:0,39,676	0/0:23,0:23:57.20:0,57,1025	0/0:6,0:6:18.06:0,18,324
chr10	87725730	.	T	TG	5842.92	PASS	AB=0.923;AC=21;AF=0.375;AN=56;BaseQRankSum=-8.305;DP=535;FS=1.587;HRun=6;HaplotypeScore=95.3584;InbreedingCoeff=0.9303;MQ=73.37;MQ0=0;MQRankSum=-1.086;QD=28.36;ReadPosRankSum=-0.993;VQSLOD=4.6022;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:35:96.31:1204,96,0	1/1:2,5:7:18:206,18,0	0/0:10,0:10:17.40:0,17,156	0/0:22,0:23:18.31:0,18,237	0/0:13,0:13:27.06:0,27,275	0/0:20,0:20:54.03:0,54,525	0/0:27,0:27:72.16:0,72,734	1/1:3,26:29:75.21:926,75,0	0/0:16,0:16:42.06:0,42,417	1/1:2,14:16:38.94:477,39,0	1/1:2,14:16:27.09:337,27,0	0/0:35,0:35:99:0,102,1032	0/0:20,0:20:51.11:0,51,520	0/0:17,0:17:42.03:0,42,410	0/0:29,0:29:72.16:0,72,735	0/0:31,0:31:90.17:0,90,900	1/1:2,19:21:54.17:679,54,0	0/0:21,0:21:54.09:0,54,542	1/1:2,11:13:36.09:424,36,0	1/1:1,12:13:33.10:402,33,0	1/1:6,17:24:45.01:543,45,0	0/0:19,0:19:54.08:0,54,538	0/0:14,0:14:27.06:0,27,275	0/0:19,0:19:54.12:0,54,551	0/0:10,0:10:30.04:0,30,296	0/1:11,1:12:4.67:5,0,273	1/1:2,18:20:51.16:641,51,0	0/0:3,0:3:9.02:0,9,92
chr10	87725886	.	A	AC	25146.57	PASS	AC=54;AF=0.964;AN=56;BaseQRankSum=-4.161;DP=681;FS=11.391;HRun=3;HaplotypeScore=62.7841;InbreedingCoeff=0.6788;MQ=64.58;MQ0=0;MQRankSum=-4.189;QD=37.36;ReadPosRankSum=2.469;VQSLOD=4.7112;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,32:37:99:1425,102,0	1/1:1,6:7:15.05:209,15,0	1/1:5,2:7:6.24:109,6,0	0/0:8,0:8:2.57:0,3,75	1/1:2,21:23:54.18:754,54,0	1/1:2,29:31:78.25:1074,78,0	1/1:2,27:29:78.26:1092,78,0	1/1:0,37:37:99:1539,111,0	1/1:1,30:31:90.30:1260,90,0	1/1:1,26:27:81.27:1131,81,0	1/1:1,16:17:33.11:462,33,0	1/1:1,41:42:99:1637,117,0	1/1:1,18:19:54.18:756,54,0	1/1:1,24:25:72.24:1002,72,0	1/1:2,21:23:57.19:798,57,0	1/1:3,38:41:99:1428,102,0	1/1:1,46:47:99:1764,126,0	1/1:0,23:23:69.23:966,69,0	1/1:1,19:20:57.16:777,57,0	1/1:2,15:17:43.69:588,44,0	1/1:2,27:29:75.25:1050,75,0	1/1:2,17:19:42.14:587,42,0	1/1:0,16:16:45.15:629,45,0	1/1:2,24:26:66.22:918,66,0	1/1:2,16:18:51.17:712,51,0	1/1:1,24:25:72.24:1008,72,0	1/1:1,24:25:72.24:1008,72,0	1/1:0,11:11:33.11:461,33,0
chr10	87726319	.	AGT	A	1144.90	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.082;DP=604;FS=3.751;HRun=0;HaplotypeScore=108.8640;InbreedingCoeff=0.9415;MQ=64.36;MQ0=8;MQRankSum=-9.509;QD=5.28;ReadPosRankSum=-1.003;VQSLOD=2.5022;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:21.61:105,22,0	1/1:10,0:10:19.95:99,20,0	0/0:34,0:14:11.92:0,12,92	0/0:27,0:16:15.11:0,15,102	0/0:21,0:21:31.24:0,31,660	0/0:19,0:19:33.10:0,33,469	0/0:24,0:24:48.10:0,48,642	1/1:36,0:35:39.02:219,39,0	0/0:17,0:17:42.08:0,42,578	1/1:21,0:21:46.70:238,47,0	1/1:15,0:15:25.59:120,26,0	0/0:24,0:24:7.42:0,7,755	0/0:24,1:25:18.11:0,18,659	0/0:15,0:15:25.44:0,25,486	0/0:16,0:16:36.10:0,36,526	0/0:23,1:24:17.51:0,18,816	1/1:24,0:24:14.15:72,14,0	0/0:32,0:32:60.22:0,60,1016	1/1:15,0:15:20.40:120,20,0	1/1:20,0:20:29.78:138,30,0	1/1:18,0:19:2.60:10,3,0	0/0:17,1:18:17.03:0,17,654	0/0:13,0:13:30.06:0,30,409	0/0:29,1:30:47.97:0,48,1104	0/0:19,0:18:14.50:0,14,510	0/0:22,0:22:54.10:0,54,722	1/1:25,0:25:44.95:238,45,0	0/0:7,0:7:18.05:0,18,253
chr10	87726335	.	TGTGTGCGC	T	8154.63	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.927;DP=587;FS=1.280;HRun=0;HaplotypeScore=138.9915;InbreedingCoeff=0.9653;MQ=55.65;MQ0=9;MQRankSum=-8.430;QD=40.98;ReadPosRankSum=0.172;VQSLOD=4.1630;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:29:27.09:742,27,0	1/1:2,8:10:24.08:647,24,0	0/0:27,0:9:15.05:0,15,227	0/0:18,0:7:14.67:0,15,252	0/0:21,0:21:60.18:0,60,2141	0/0:18,0:18:45.15:0,45,1647	0/0:22,0:22:60.21:0,60,2072	1/1:3,16:18:51.14:1031,51,0	0/0:18,0:18:51.16:0,51,1799	1/1:3,18:22:57.28:1442,57,0	1/1:0,16:16:30.10:829,30,0	0/0:24,0:24:65.03:0,65,2430	0/0:23,0:23:63.19:0,63,2114	0/0:18,0:18:48.15:0,48,1629	0/0:19,0:19:54.15:0,54,1672	0/0:25,0:25:75.26:0,75,2665	1/1:3,26:28:14.84:437,15,0	0/0:31,0:31:93.32:0,93,3362	1/1:1,13:14:39.11:712,39,0	1/1:1,18:19:36.12:1002,36,0	1/1:3,19:21:3.01:55,3,0	0/0:21,0:21:63.20:0,63,2272	0/0:17,0:17:45.15:0,45,1354	0/0:34,0:34:99:0,102,3812	0/0:19,0:18:48.16:0,48,1745	0/0:25,0:25:72.24:0,72,2362	1/1:3,16:19:48.15:1257,48,0	0/0:7,0:7:21.07:0,21,802
chr10	87729147	.	CGTGTGTGTGTGTGT	C	906.35	PASS	AC=14;AF=0.269;AN=52;BaseQRankSum=4.619;DP=593;FS=1.175;HRun=0;HaplotypeScore=209.1713;InbreedingCoeff=0.6724;MQ=64.70;MQ0=8;MQRankSum=-1.438;QD=6.38;ReadPosRankSum=0.753;VQSLOD=2.8189;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,2:28:9.02:191,9,0	1/1:4,3:7:2.42:27,2,0	./.	0/0:28,0:21:3.01:0,3,45	0/0:14,0:15:6.02:0,6,230	0/0:26,0:25:39.13:0,39,1998	0/0:23,0:30:27.09:0,27,1000	1/1:26,0:23:1.82:5,2,0	0/0:14,0:14:18.06:0,18,728	1/1:16,4:19:1.07:170,1,0	./.	0/0:23,0:26:33.10:0,33,1168	0/0:15,0:18:36.12:0,36,1634	0/0:16,0:15:21.07:0,21,914	0/0:18,0:19:19.60:0,20,878	0/0:22,0:22:30.55:0,31,1087	1/1:24,9:33:14.98:397,15,0	0/0:21,0:28:54.19:0,54,2208	0/0:16,0:16:0.47:0,0,1	1/1:10,1:13:2.95:98,3,0	0/0:29,16:45:0.47:0,0,1	0/0:8,0:8:9.03:0,9,291	0/0:14,0:16:18.06:0,18,675	0/0:29,0:32:54.18:0,54,1877	0/0:28,0:28:36.12:0,36,1691	0/0:20,0:21:20.76:0,21,826	1/1:7,4:12:4.73:165,5,0	0/0:3,0:3:6.02:0,6,302
chr10	87729865	.	C	CTG	7470.56	PASS	AB=0.923;AC=19;AF=0.339;AN=56;BaseQRankSum=13.728;DP=706;FS=4.139;HRun=0;HaplotypeScore=121.7168;InbreedingCoeff=0.8855;MQ=78.80;MQ0=0;MQRankSum=-7.116;QD=34.91;ReadPosRankSum=-2.506;VQSLOD=6.1769;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,29:35:63.21:1179,63,0	1/1:3,9:12:2.15:423,2,0	0/0:17,0:17:36.12:0,36,519	0/0:22,0:22:57.08:0,57,757	0/0:17,0:17:51.17:0,51,750	0/0:25,0:25:69.20:0,69,975	0/0:30,0:30:90.27:0,90,1282	1/1:3,19:22:57.20:1058,57,0	0/0:24,0:24:72.24:0,72,1060	1/1:1,17:18:54.14:972,54,0	1/1:2,12:14:21.07:393,21,0	0/0:52,0:52:99:0,147,2104	0/0:34,0:34:61.48:0,61,1375	0/0:29,0:29:87.27:0,87,1242	0/0:35,0:35:99:0,105,1507	0/0:45,0:45:99:0,132,1943	0/0:42,0:42:99:0,123,1811	0/0:24,0:24:66.18:0,66,947	1/1:0,17:19:57.12:986,57,0	1/1:2,7:9:15.05:281,15,0	1/1:2,43:45:72.69:1350,73,0	0/0:19,0:19:48.16:0,48,704	0/0:21,0:21:54.18:0,54,794	0/0:35,0:35:99:0,102,1500	0/0:13,0:13:36.12:0,36,530	0/1:22,2:24:43.07:43,0,849	1/1:0,16:16:42.14:786,42,0	0/0:8,0:8:24.08:0,24,353
chr10	87730115	.	GTC	G	9012.91	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.545;DP=775;FS=2.444;HRun=0;HaplotypeScore=92.0901;InbreedingCoeff=0.9992;MQ=79.76;MQ0=1;MQRankSum=-7.062;QD=36.20;ReadPosRankSum=0.388;VQSLOD=6.9081;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,43:47:99:1513,108,0	1/1:0,9:9:27.09:377,27,0	0/0:21,0:20:54.18:0,54,894	0/0:22,0:22:59.79:0,60,962	0/0:17,0:17:51.16:0,51,876	0/0:25,0:25:75.26:0,75,1323	0/0:34,0:34:96.33:0,96,1683	1/1:4,22:26:66.22:907,66,0	0/0:21,0:21:63.22:0,63,1130	1/1:0,20:20:60.20:837,60,0	1/1:0,16:16:39.60:545,40,0	0/0:50,0:50:99:0,147,2570	0/0:50,0:50:99:0,141,2503	0/0:32,0:32:93.32:0,93,1669	0/0:39,0:39:99:0,114,1959	0/0:38,0:38:99:0,114,2038	1/1:0,24:24:63.21:882,63,0	0/0:31,0:31:93.32:0,93,1662	1/1:1,13:14:39.13:531,39,0	1/1:0,19:19:51.13:692,51,0	1/1:2,52:54:99:2015,144,0	0/0:29,0:29:81.28:0,81,1454	0/0:21,0:21:60.17:0,60,1046	0/0:43,0:43:99:0,123,2145	0/0:17,0:17:51.16:0,51,844	0/0:29,0:29:81.28:0,81,1443	1/1:1,19:19:51.17:714,51,0	0/0:7,0:7:21.05:0,21,346
chr10	87730883	.	GA	G	478.56	PASS	AB=0.988;AC=30;AF=0.536;AN=56;BaseQRankSum=8.679;DP=428;FS=83.178;HRun=1;HaplotypeScore=270.0416;InbreedingCoeff=-0.1507;MQ=47.78;MQ0=0;MQRankSum=-5.490;QD=1.25;ReadPosRankSum=6.919;VQSLOD=-0.7101;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:13.06:57,0,13	1/1:3,0:4:4.55:14,5,0	0/1:3,0:3:2.55:3,0,5	0/0:8,0:8:6.67:0,7,70	1/1:7,0:7:1.53:9,2,0	1/1:15,0:15:7.78:27,8,0	0/1:33,0:33:32.79:48,0,33	0/0:21,0:21:9.97:0,10,160	0/1:16,0:16:8.76:16,0,9	0/1:12,0:12:18.52:19,0,69	1/1:4,0:4:7.23:20,7,0	0/1:35,0:35:29.42:52,0,29	0/1:8,0:8:3.46:8,0,3	1/1:17,1:18:32.48:100,32,0	0/1:16,0:16:16.48:16,0,34	0/1:22,0:22:23.82:26,0,24	0/1:24,0:24:14.98:19,0,15	0/0:12,0:12:9.63:0,10,28	0/1:13,0:13:14.99:15,0,55	0/0:1,0:1:1.55:0,2,4	1/1:40,1:40:27.83:95,28,0	0/1:9,1:10:26.77:27,0,29	1/1:8,0:8:4.11:14,4,0	0/1:19,0:19:2.74:20,0,3	0/1:8,1:9:1.30:10,0,1	0/1:14,0:14:8.88:9,0,83	0/1:18,0:18:10.31:10,0,44	0/0:3,0:3:5.17:0,5,15
chr10	87730885	.	CG	C	13059.55	PASS	AB=0.889;AC=55;AF=0.982;AN=56;BaseQRankSum=0.556;DP=390;FS=4.907;HRun=1;HaplotypeScore=221.0580;InbreedingCoeff=-0.0341;MQ=48.68;MQ0=0;MQRankSum=-2.787;QD=33.49;ReadPosRankSum=2.649;VQSLOD=4.2619;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:78.23:1014,78,0	1/1:1,3:4:11.95:137,12,0	1/1:2,1:3:5.38:50,5,0	0/1:7,1:8:29.32:29,0,84	1/1:2,4:6:9.49:105,9,0	1/1:1,14:15:45.15:592,45,0	1/1:4,27:31:90.25:1149,90,0	1/1:0,16:16:48.16:643,48,0	1/1:2,14:16:48.12:594,48,0	1/1:4,7:11:33.05:392,33,0	1/1:0,4:4:12.04:159,12,0	1/1:4,30:34:99:1230,101,0	1/1:1,7:8:24.08:311,24,0	1/1:1,17:18:54.17:686,54,0	1/1:2,13:15:41.97:528,42,0	1/1:1,19:20:60.19:778,60,0	1/1:2,19:21:57.17:736,57,0	1/1:2,10:12:33.11:436,33,0	1/1:1,9:10:30.03:360,30,0	1/1:0,1:1:3.01:31,3,0	1/1:1,33:33:52.73:699,53,0	1/1:2,6:8:21.06:263,21,0	1/1:0,8:8:15.05:188,15,0	1/1:3,14:17:36.12:471,36,0	1/1:2,6:8:21.07:280,21,0	1/1:0,11:11:33.11:434,33,0	1/1:2,15:17:51.11:639,51,0	1/1:0,3:3:9.03:126,9,0
chr10	87730887	.	CAG	C	11063.78	PASS	AB=1.000;AC=55;AF=0.982;AN=56;BaseQRankSum=1.389;DP=377;FS=0.000;HRun=0;HaplotypeScore=231.5215;InbreedingCoeff=0.3264;MQ=50.03;MQ0=0;MQRankSum=-2.839;QD=29.35;ReadPosRankSum=2.289;VQSLOD=5.2138;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:76.42:848,76,0	1/1:4,0:4:12.03:136,12,0	1/1:3,0:3:5.50:38,6,0	0/1:9,0:9:1.43:1,0,108	1/1:5,1:6:9.89:115,10,0	1/1:15,0:15:44.97:514,45,0	1/1:28,2:30:87.15:1002,87,0	1/1:16,0:16:47.97:542,48,0	1/1:14,1:15:45.14:545,45,0	1/1:7,2:9:27.06:321,27,0	1/1:4,0:4:12.01:126,12,0	1/1:31,3:34:99:1147,102,0	1/1:8,0:8:23.94:266,24,0	1/1:18,0:18:54.16:636,54,0	1/1:12,0:13:36.97:400,37,0	1/1:20,0:20:59.91:688,60,0	1/1:20,0:20:54.16:626,54,0	1/1:11,0:11:28.43:353,28,0	1/1:10,0:10:26.11:269,26,0	1/1:1,0:1:3.01:32,3,0	1/1:34,0:33:52.93:563,53,0	1/1:7,1:8:21.05:239,21,0	1/1:8,0:8:15.02:160,15,0	1/1:15,0:15:32.89:344,33,0	1/1:7,0:7:18.02:186,18,0	1/1:11,0:11:33.08:383,33,0	1/1:15,0:15:45.08:518,45,0	1/1:3,0:3:8.94:65,9,0
chr10	87730888	.	AG	A	9502.39	PASS	AB=0.800;AC=55;AF=0.982;AN=56;BaseQRankSum=0.479;DP=374;FS=0.000;HRun=1;HaplotypeScore=230.1782;InbreedingCoeff=0.1851;MQ=48.29;MQ0=0;MQRankSum=-3.431;QD=25.41;ReadPosRankSum=1.142;VQSLOD=4.3585;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:77.90:728,78,0	1/1:1,3:4:11.51:99,12,0	1/1:2,1:3:5.99:62,6,0	0/1:6,2:8:5.24:5,0,83	1/1:1,5:6:9.45:80,9,0	1/1:1,13:14:42.10:448,42,0	1/1:4,26:30:86.80:838,87,0	1/1:1,15:16:48.13:539,48,0	1/1:1,14:15:44.87:446,45,0	1/1:2,7:9:26.51:271,27,0	1/1:0,4:4:11.92:98,12,0	1/1:6,28:34:99:911,101,0	1/1:1,7:8:24.02:246,24,0	1/1:0,18:18:54.02:515,54,0	1/1:1,12:13:38.32:350,38,0	1/1:0,19:19:57.12:581,57,0	1/1:1,19:20:54.12:566,54,0	1/1:1,10:11:30.07:334,30,0	1/1:1,9:10:26.89:279,27,0	1/1:0,0:1:2.97:20,3,0	1/1:1,33:33:55.32:482,55,0	1/1:1,7:8:20.88:187,21,0	1/1:0,8:8:14.75:114,15,0	1/1:2,13:15:32.99:304,33,0	1/1:0,7:7:17.89:149,18,0	1/1:0,11:11:33.07:352,33,0	1/1:0,15:15:44.41:425,44,0	1/1:3,0:3:8.98:73,9,0
chr10	87730892	.	CAG	C	11265.22	PASS	AB=1.000;AC=52;AF=0.963;AN=54;BaseQRankSum=-0.596;DP=399;FS=0.000;HRun=0;HaplotypeScore=252.5576;InbreedingCoeff=-0.0358;MQ=45.08;MQ0=0;MQRankSum=-3.842;QD=28.23;ReadPosRankSum=1.549;VQSLOD=4.6770;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,3:33:84.29:895,84,0	1/1:5,0:5:12.03:135,12,0	0/1:3,0:3:5.34:23,0,5	0/1:8,0:8:28.76:29,0,84	1/1:6,0:6:9.37:82,9,0	1/1:13,1:14:39.08:449,39,0	1/1:28,2:30:87.26:1039,87,0	1/1:15,1:16:48.14:568,48,0	1/1:15,0:15:45.13:539,45,0	1/1:10,0:10:29.97:324,30,0	1/1:3,1:4:6.64:48,7,0	1/1:33,4:37:99:1294,111,0	1/1:8,0:8:24.02:264,24,0	1/1:19,2:21:63.09:722,63,0	1/1:14,1:15:45.03:476,45,0	1/1:21,0:21:63.19:735,63,0	1/1:18,2:20:48.14:565,48,0	1/1:11,1:12:30.09:372,30,0	1/1:14,0:14:38.69:407,39,0	1/1:2,0:2:2.92:17,3,0	1/1:37,0:36:50.75:500,51,0	1/1:7,1:8:19.87:220,20,0	1/1:6,2:8:14.65:137,15,0	1/1:15,1:16:33.06:376,33,0	1/1:7,0:7:14.70:118,15,0	1/1:12,1:13:36.10:417,36,0	1/1:15,1:16:45.07:513,45,0	./.
chr10	87730893	.	AG	A	9605.85	PASS	AB=0.813;AC=52;AF=0.963;AN=54;BaseQRankSum=-0.491;DP=398;FS=1.928;HRun=1;HaplotypeScore=252.9607;InbreedingCoeff=0.0055;MQ=44.87;MQ0=0;MQRankSum=-3.842;QD=24.14;ReadPosRankSum=1.547;VQSLOD=4.4568;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:33:81.10:737,81,0	1/1:0,5:5:12:114,12,0	0/1:2,1:3:5.19:36,0,5	0/1:6,1:7:11.53:12,0,69	1/1:0,6:6:9.84:81,10,0	1/1:2,11:13:38.99:388,39,0	1/1:2,28:30:87.09:870,87,0	1/1:1,15:16:47.97:527,48,0	1/1:0,15:15:45.10:474,45,0	1/1:0,10:10:29.99:301,30,0	1/1:1,3:4:6.64:40,7,0	1/1:5,31:36:99:1001,107,0	1/1:1,7:8:24.02:239,24,0	1/1:5,16:21:62.63:565,63,0	1/1:2,13:15:44.51:383,45,0	1/1:0,21:21:63.14:665,63,0	1/1:3,17:20:48.43:476,48,0	1/1:1,11:12:30.08:345,30,0	1/1:0,14:14:40.03:391,40,0	1/1:1,1:2:2.99:24,3,0	1/1:3,36:38:55.55:453,56,0	1/1:1,7:8:19.81:179,20,0	1/1:2,6:8:14.66:102,15,0	1/1:1,15:16:32.73:299,33,0	1/1:0,7:7:14.69:108,15,0	1/1:1,12:13:36.57:373,37,0	1/1:1,15:16:43.31:424,43,0	./.
chr10	87730901	.	CG	C	10434.36	PASS	AB=0.889;AC=55;AF=0.982;AN=56;BaseQRankSum=1.606;DP=414;FS=15.002;HRun=1;HaplotypeScore=233.5740;InbreedingCoeff=0.1095;MQ=50.74;MQ0=0;MQRankSum=-2.398;QD=25.20;ReadPosRankSum=2.424;VQSLOD=1.9304;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,24:30:77.99:773,78,0	1/1:1,5:6:18.01:187,18,0	1/1:2,2:4:6.02:84,6,0	0/1:7,1:8:5.44:5,0,66	1/1:2,5:7:3.29:118,3,0	1/1:6,9:15:37.76:406,38,0	1/1:6,26:32:90.16:958,90,0	1/1:6,13:19:27.94:422,28,0	1/1:2,12:14:41.92:433,42,0	1/1:2,7:9:21.91:229,22,0	1/1:1,3:4:3.01:37,3,0	1/1:6,31:37:99:1080,105,0	1/1:0,5:5:15.03:161,15,0	1/1:8,16:24:67.17:623,67,0	1/1:3,13:16:47.76:450,48,0	1/1:2,18:20:60.09:649,60,0	1/1:6,16:22:59.84:595,60,0	1/1:4,12:17:37.22:473,37,0	1/1:2,11:13:38.88:395,39,0	1/1:1,2:3:6:61,6,0	1/1:11,31:42:63.39:722,63,0	1/1:3,5:8:15.01:147,15,0	1/1:4,6:10:15.75:132,16,0	1/1:2,13:15:38.10:391,38,0	1/1:0,3:3:6.01:64,6,0	1/1:3,9:12:34.63:330,35,0	1/1:3,15:18:50.66:490,51,0	1/1:0,1:1:2.97:20,3,0
chr10	87730905	.	TG	T	12203.14	PASS	AB=0.900;AC=55;AF=0.982;AN=56;BaseQRankSum=-0.347;DP=443;FS=2.474;HRun=4;HaplotypeScore=230.8710;InbreedingCoeff=-0.0377;MQ=55.34;MQ0=0;MQRankSum=-0.980;QD=27.55;ReadPosRankSum=1.161;VQSLOD=3.1122;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:78.20:914,78,0	1/1:0,7:7:18.06:215,18,0	1/1:3,3:6:9.03:108,9,0	0/1:6,1:9:25.72:26,0,35	1/1:0,7:7:15.52:180,16,0	1/1:2,13:15:42.02:467,42,0	1/1:3,32:35:87.16:1004,87,0	1/1:3,19:22:54.15:634,54,0	1/1:2,12:14:36.11:429,36,0	1/1:1,9:10:24.07:287,24,0	1/1:0,5:5:6.02:72,6,0	1/1:3,34:37:99:1207,105,0	1/1:1,5:6:15.05:179,15,0	1/1:3,21:24:68.98:782,69,0	1/1:1,16:17:48.15:572,48,0	1/1:1,19:20:57.17:679,57,0	1/1:2,21:23:54.16:645,54,0	1/1:1,17:18:48.10:559,48,0	1/1:1,13:14:35.85:393,36,0	1/1:1,2:3:6.02:71,6,0	1/1:5,46:51:80.32:900,80,0	1/1:1,7:8:15.04:177,15,0	1/1:2,8:10:18.06:215,18,0	1/1:0,16:16:35.75:410,36,0	1/1:0,3:3:5.97:55,6,0	1/1:2,12:14:36.09:418,36,0	1/1:2,16:18:48.15:571,48,0	1/1:0,1:1:3.01:36,3,0
chr10	87733021	.	T	TG	2043.68	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=1.687;DP=566;FS=0.468;HRun=9;HaplotypeScore=64.4533;InbreedingCoeff=0.9080;MQ=89.21;MQ0=0;MQRankSum=-0.524;QD=15.48;ReadPosRankSum=-1.420;VQSLOD=3.4586;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,16:25:7.25:306,7,0	0/0:1,0:1:3:0,3,26	0/0:24,0:24:52.70:0,53,415	0/0:27,0:27:39.22:0,39,453	0/0:16,0:16:41.99:0,42,364	0/0:16,0:17:44.03:0,44,370	0/0:21,0:21:44.91:0,45,380	1/1:5,18:23:21.98:428,22,0	0/0:24,0:24:53.95:0,54,469	0/0:15,0:15:26.98:0,27,234	0/0:10,0:10:23.99:0,24,208	0/0:24,0:24:59.82:0,60,509	0/0:19,0:19:44.97:0,45,390	0/0:20,0:20:53.98:0,54,469	0/0:29,0:29:71.94:0,72,621	0/0:41,0:41:99:0,108,929	0/0:30,0:30:83.98:0,84,729	0/0:17,0:17:38.98:0,39,339	1/1:9,8:17:27.02:276,27,0	1/1:2,6:8:14.98:143,15,0	1/1:10,24:34:27.97:508,28,0	0/0:13,0:13:35.87:0,36,301	0/0:14,0:14:2.69:0,3,242	0/0:18,0:18:44.98:0,45,391	0/0:19,0:19:24.19:0,24,341	0/0:20,0:20:47.99:0,48,417	1/1:2,23:25:51.14:563,51,0	0/0:14,0:14:38.95:0,39,329
chr10	87733775	.	GC	G	6142.96	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=11.689;DP=598;FS=28.779;HRun=6;HaplotypeScore=57.7380;InbreedingCoeff=0.9872;MQ=87.82;MQ0=0;MQRankSum=-1.102;QD=26.48;ReadPosRankSum=0.584;VQSLOD=2.9076;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:39:99:1063,99,0	1/1:0,4:4:12.03:129,12,0	0/0:20,0:20:54.15:0,54,666	0/0:22,0:22:50.62:0,51,554	0/0:11,0:11:33.09:0,33,418	0/0:10,0:10:30.10:0,30,392	0/0:36,0:36:99:0,102,1324	1/1:4,19:23:54.10:563,54,0	0/0:17,0:17:45.11:0,45,548	1/1:4,14:18:42.10:447,42,0	1/1:0,11:11:24.06:258,24,0	0/0:28,0:28:84.23:0,84,1053	0/0:16,0:16:48.10:0,48,598	0/0:19,0:19:48.15:0,48,624	0/0:27,0:27:78.25:0,78,1026	0/0:32,0:32:90.28:0,90,1161	1/1:1,49:50:99:1386,129,0	0/0:43,0:43:99:0,126,1654	1/1:4,19:23:57.10:589,57,0	1/1:1,10:11:27.07:290,27,0	1/1:1,34:35:87.22:934,87,0	0/0:10,0:10:30.10:0,30,389	0/0:11,0:11:33.11:0,33,433	0/0:28,0:28:72.22:0,72,931	0/0:10,0:10:27.09:0,27,355	0/0:15,1:16:9.89:0,10,479	1/1:1,17:18:45.11:483,45,0	0/0:10,0:10:27.09:0,27,355
chr10	87734834	.	TC	T	4186.08	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=12.479;DP=532;FS=1.669;HRun=8;HaplotypeScore=62.5347;InbreedingCoeff=0.9871;MQ=73.39;MQ0=0;MQRankSum=-0.514;QD=21.25;ReadPosRankSum=-1.081;VQSLOD=3.4972;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:48.07:463,48,0	1/1:2,7:9:21.02:201,21,0	0/0:12,0:12:23.27:0,23,254	0/0:11,0:11:18.05:0,18,208	0/0:11,0:12:29.94:0,30,319	0/0:16,0:16:39.12:0,39,470	0/0:23,0:23:63.17:0,63,738	1/1:5,13:18:36.05:348,36,0	0/0:15,0:15:42.13:0,42,503	1/1:4,11:15:39.05:372,39,0	1/1:2,3:5:12.01:113,12,0	0/0:28,0:28:81.24:0,81,970	0/0:19,0:19:57.12:0,57,647	0/0:30,0:31:84.11:0,84,989	0/0:25,0:25:78.11:0,78,919	0/0:28,0:28:78.24:0,78,941	1/1:9,33:42:92.07:997,92,0	0/0:30,0:30:81.25:0,81,976	1/1:2,12:14:36.04:340,36,0	1/1:3,14:17:39.01:363,39,0	1/1:7,32:39:60.47:759,60,0	0/0:13,0:13:27.07:0,27,315	0/0:6,0:6:12.01:0,12,122	0/0:31,0:31:69.21:0,69,833	0/0:10,0:10:24.06:0,24,278	0/0:15,0:15:33.09:0,33,388	1/1:1,11:12:24.04:232,24,0	0/0:9,0:9:21.05:0,21,242
chr10	87734917	.	C	CG	2395.87	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.587;DP=629;FS=0.476;HRun=6;HaplotypeScore=81.3687;InbreedingCoeff=0.9689;MQ=80.11;MQ0=0;MQRankSum=-2.983;QD=29.22;ReadPosRankSum=0.132;VQSLOD=4.0128;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,1215	1/1:1,8:9:21.07:261,21,0	0/0:17,0:17:24.60:0,25,375	0/0:16,0:16:34.76:0,35,355	0/0:23,0:23:69.14:0,69,696	0/0:20,0:20:54.12:0,54,551	0/0:19,0:19:54.12:0,54,550	0/0:20,0:20:39.05:0,39,388	0/0:24,0:24:66.13:0,66,665	1/1:6,17:23:54.17:672,54,0	1/1:2,10:12:24.08:302,24,0	0/0:22,0:22:60.13:0,60,612	0/0:27,0:27:75.16:0,75,764	0/0:27,0:27:75.15:0,75,757	0/0:30,0:30:84.19:0,84,857	0/0:28,0:28:81.17:0,81,820	1/1:3,35:38:99:1321,105,0	0/0:30,0:30:78.17:0,78,796	0/0:20,0:20:45.09:0,45,453	0/0:15,0:15:36.08:0,36,367	0/0:38,0:38:99:0,105,1071	0/0:24,0:24:69.15:0,69,704	0/0:11,0:11:30.07:0,30,306	0/0:33,0:33:90.18:0,90,911	0/0:14,0:14:36.08:0,36,367	0/0:22,0:22:54.12:0,54,550	0/0:21,0:21:63.14:0,63,643	0/0:2,0:2:6.01:0,6,61
chr10	87735238	.	TAGA	T	8155.09	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.025;DP=671;FS=1.546;HRun=0;HaplotypeScore=102.1855;InbreedingCoeff=0.9990;MQ=86.23;MQ0=0;MQRankSum=-7.263;QD=46.34;ReadPosRankSum=-0.356;VQSLOD=6.6416;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,48:48:99:2164,117,0	0/0:10,0:10:30.07:0,30,680	0/0:17,0:17:51.17:0,51,1218	0/0:30,0:31:59.52:0,60,1759	0/0:26,0:26:75.26:0,75,1847	0/0:21,0:21:63.22:0,63,1541	0/0:28,0:28:84.29:0,84,2041	1/1:0,23:23:66.22:1192,66,0	0/0:20,0:20:60.21:0,60,1472	0/0:17,0:17:51.18:0,51,1255	0/0:14,0:14:42.14:0,42,1030	0/0:32,0:32:96.33:0,96,2328	0/0:16,0:16:48.16:0,48,1182	0/0:25,0:25:71.97:0,72,1695	0/0:39,0:38:99:0,117,2874	0/0:45,0:45:99:0,135,3322	0/0:27,0:27:78.27:0,78,1910	0/0:23,0:23:69.24:0,69,1678	1/1:0,18:18:54.17:953,54,0	1/1:0,19:19:45.15:837,45,0	1/1:0,41:41:93.07:1729,93,0	0/0:23,0:23:66.21:0,66,1570	0/0:13,0:13:39.13:0,39,954	0/0:19,0:19:57.20:0,57,1398	0/0:19,0:19:57.20:0,57,1375	0/0:23,0:23:66.23:0,66,1623	1/1:1,26:27:69.24:1280,69,0	0/0:7,0:7:21.07:0,21,511
chr10	87735517	.	GGT	G	5706.37	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.635;DP=727;FS=8.247;HRun=0;HaplotypeScore=106.0836;InbreedingCoeff=0.9714;MQ=71.60;MQ0=2;MQRankSum=-0.935;QD=22.73;ReadPosRankSum=-0.308;VQSLOD=5.2089;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,12:34:77.69:735,78,0	1/1:2,11:13:33.10:409,33,0	0/0:32,0:24:27.80:0,28,333	0/0:21,0:19:6.38:0,6,247	0/0:30,0:30:69.05:0,69,1063	0/0:28,1:29:41.05:0,41,1165	0/0:45,0:45:99:0,117,1890	1/1:7,21:28:63.11:760,63,0	0/0:17,0:17:45.15:0,45,738	1/1:7,15:22:42.13:518,42,0	1/1:1,13:14:14.84:186,15,0	0/0:30,0:31:78.24:0,78,1231	0/0:17,0:17:36.12:0,36,587	0/0:29,0:29:78.26:0,78,1226	0/0:31,0:31:93.28:0,93,1446	0/0:34,0:34:93.27:0,93,1441	1/1:4,29:33:51.16:627,51,0	0/0:37,1:38:62.12:0,62,1511	1/1:6,15:22:47.98:566,48,0	1/1:3,14:16:33.04:390,33,0	1/1:12,39:52:99:1279,105,0	0/0:15,1:16:7.96:0,8,648	0/0:13,0:13:33.08:0,33,477	0/0:37,0:37:96.28:0,96,1522	0/0:21,0:21:54.18:0,54,863	0/0:19,0:19:48.16:0,48,777	1/1:4,11:15:20.63:237,21,0	0/0:16,0:16:33.10:0,33,511
chr10	87738200	.	C	CT	3534.66	PASS	AB=0.985;AC=17;AF=0.304;AN=56;BaseQRankSum=3.395;DP=635;FS=8.661;HRun=9;HaplotypeScore=89.7552;InbreedingCoeff=0.6382;MQ=67.94;MQ0=0;MQRankSum=-3.856;QD=15.78;ReadPosRankSum=-3.129;VQSLOD=2.6183;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,17:22:57.14:621,57,0	0/1:7,0:7:14.14:14,0,31	0/1:15,0:14:9.78:10,0,51	0/1:11,0:10:7.10:7,0,55	0/0:24,0:24:50.93:0,51,435	0/0:28,0:28:71.95:0,72,621	0/0:16,0:16:32.99:0,33,286	1/1:10,31:40:84.22:921,84,0	0/0:29,0:29:71.95:0,72,619	0/1:24,0:24:0.52:1,0,131	0/0:18,0:18:30.83:0,31,169	0/0:30,0:30:83.91:0,84,712	0/0:21,0:21:53.96:0,54,465	0/0:23,0:23:56.98:0,57,495	0/0:30,0:30:83.91:0,84,715	0/0:53,0:53:99:0,144,1245	0/1:23,0:23:10.17:10,0,89	0/0:15,0:15:32.99:0,33,286	1/1:2,11:13:33.07:354,33,0	1/1:8,16:25:45.04:471,45,0	1/1:2,6:8:21.04:221,21,0	0/0:25,0:25:65.96:0,66,571	0/0:18,0:18:47.99:0,48,417	0/0:14,0:14:35.93:0,36,300	0/0:22,0:22:62.97:0,63,543	0/0:29,0:29:59.93:0,60,513	1/1:8,26:34:84.17:905,84,0	0/0:16,0:16:47.99:0,48,417
chr10	87738229	.	C	CATTT	5012.42	PASS	AB=0.988;AC=17;AF=0.304;AN=56;BaseQRankSum=8.688;DP=697;FS=13.071;HRun=0;HaplotypeScore=132.3122;InbreedingCoeff=0.5730;MQ=59.30;MQ0=4;MQRankSum=-1.559;QD=18.99;ReadPosRankSum=-4.843;VQSLOD=2.6487;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:18:20.71:208,21,0	1/1:1,10:11:2.90:385,3,0	0/0:26,0:12:20.68:0,21,213	0/0:21,0:13:20.37:0,20,243	0/0:25,0:26:24.93:0,25,1018	0/0:24,0:24:66.01:0,66,797	0/0:21,0:21:53.97:0,54,729	0/1:41,0:39:60.30:510,0,60	0/0:30,0:30:78.13:0,78,1235	1/1:4,25:30:58.98:1458,59,0	1/1:0,17:18:38.79:569,39,0	0/0:34,0:35:99:0,102,1695	0/0:22,0:22:63.10:0,63,969	0/0:27,0:27:81.16:0,81,1321	0/0:36,0:36:99:0,99,1604	0/0:47,0:48:99:0,144,2192	1/1:2,15:18:21.07:574,21,0	0/0:16,0:16:41.65:0,42,561	0/1:18,0:17:66.40:120,0,66	0/1:22,0:22:3.20:280,0,3	0/1:17,0:17:49.49:137,0,49	0/0:22,0:23:63.09:0,63,929	0/0:27,0:27:75.08:0,75,1071	0/0:16,0:16:39.10:0,39,686	0/0:24,0:24:69.09:0,69,1032	0/1:29,2:32:74.16:74,0,1285	1/1:21,0:37:69.23:696,69,0	0/0:10,0:10:30.08:0,30,544
chr10	87738433	.	TCTTC	T	3742.06	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=7.778;DP=760;FS=5.820;HRun=0;HaplotypeScore=136.6204;InbreedingCoeff=0.9346;MQ=61.67;MQ0=1;MQRankSum=0.386;QD=19.49;ReadPosRankSum=0.008;VQSLOD=3.2429;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,24:40:57.19:900,57,0	0/0:10,0:12:24.07:0,24,298	0/0:27,0:23:9.03:0,9,159	./.	0/0:29,0:29:36.12:0,36,856	0/0:12,0:20:30.10:0,30,480	0/0:18,0:25:27.04:0,27,349	1/1:28,11:39:30.07:389,30,0	0/0:25,1:26:3.79:0,4,1046	0/0:23,0:26:33.10:0,33,469	0/0:12,0:16:9.01:0,9,105	0/0:32,0:32:51.18:0,51,1190	0/0:32,0:32:66.23:0,66,1437	0/0:31,0:31:54.17:0,54,1205	0/0:39,0:39:93.30:0,93,2066	0/0:51,0:51:99:0,103,2262	0/0:16,0:20:21.54:0,22,278	0/0:11,0:18:24.08:0,24,362	1/1:13,5:18:15.05:237,15,0	1/1:10,17:28:45.04:633,45,0	1/1:18,21:39:54.18:852,54,0	0/0:21,0:35:47.65:0,48,741	0/0:6,0:12:15.03:0,15,215	0/0:22,0:31:27.32:0,27,276	0/0:19,0:19:30.09:0,30,649	0/0:40,0:40:87.28:0,87,1937	1/1:8,20:28:48.16:731,48,0	0/0:14,0:14:15.05:0,15,331
chr10	87738750	.	TTTTC	T	747.48	PASS	AB=0.954;AC=11;AF=0.196;AN=56;BaseQRankSum=8.913;DP=535;FS=3.708;HRun=0;HaplotypeScore=117.8086;InbreedingCoeff=0.5962;MQ=67.56;MQ0=3;MQRankSum=-7.785;QD=5.30;ReadPosRankSum=2.427;VQSLOD=2.3109;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,1:27:17.31:189,17,0	0/0:4,0:4:5.67:0,6,15	0/0:26,0:17:42.70:0,43,442	0/0:19,0:12:16.02:0,16,144	0/0:18,0:18:54.06:0,54,1057	0/0:20,0:20:60.15:0,60,1330	0/0:17,0:17:48.04:0,48,1035	0/1:30,0:28:40.35:195,0,40	0/0:9,0:9:27.06:0,27,560	0/1:19,0:19:0.37:0,0,115	0/0:13,0:13:15.64:0,16,43	0/0:21,0:20:51.17:0,51,1166	0/0:14,0:14:42.07:0,42,927	0/0:17,0:17:51.14:0,51,1085	0/0:16,0:16:48.15:0,48,1143	0/0:35,0:35:99:0,102,2375	0/0:35,0:34:47.12:0,47,155	0/0:35,0:34:75.92:0,76,2087	0/1:21,4:24:58.85:266,0,59	1/1:13,0:13:5.19:95,5,0	1/1:13,0:13:3.57:80,4,0	0/0:17,0:17:47.99:0,48,735	0/0:12,0:12:36.03:0,36,673	0/0:19,0:19:57.20:0,57,1478	0/0:17,0:17:51.15:0,51,1231	0/0:22,0:22:64.99:0,65,1303	1/1:13,0:13:14.26:73,14,0	0/0:8,0:8:24.08:0,24,526
chr10	87738751	.	TTTC	T	3193.46	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=14.278;DP=526;FS=3.939;HRun=0;HaplotypeScore=98.1705;InbreedingCoeff=0.8898;MQ=66.72;MQ0=4;MQRankSum=-8.146;QD=17.17;ReadPosRankSum=3.974;VQSLOD=3.4397;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,16:26:55.67:660,56,0	1/1:4,0:4:7.49:27,7,0	0/0:26,1:17:6.23:0,6,274	0/0:17,0:10:12.82:0,13,111	0/0:18,0:18:54:0,54,859	0/0:20,0:20:60.14:0,60,1080	0/0:16,0:16:44.96:0,45,839	1/1:5,22:25:67.60:724,68,0	0/0:9,0:9:27.05:0,27,472	0/1:21,0:21:12.36:111,0,12	1/1:13,0:13:22.78:90,23,0	0/0:21,0:20:51.14:0,51,934	0/0:14,0:14:42.07:0,42,774	0/0:17,0:17:51.11:0,51,885	0/0:16,0:16:48.13:0,48,944	0/0:35,0:35:99:0,102,1992	1/1:35,0:34:54.82:200,55,0	0/0:35,0:34:78.07:0,78,1715	1/1:5,16:20:53.77:621,54,0	1/1:0,12:12:24.05:371,24,0	1/1:0,13:13:27.01:368,27,0	0/0:16,0:16:47.94:0,48,594	0/0:12,0:12:36.03:0,36,553	0/0:19,0:19:57.18:0,57,1210	0/0:18,0:18:54.15:0,54,1039	0/0:22,0:22:53.25:0,53,1013	1/1:0,13:13:14.95:233,15,0	0/0:8,0:8:24.03:0,24,398
chr10	87738752	.	TTC	T	3602.78	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.385;DP=529;FS=6.115;HRun=0;HaplotypeScore=87.5844;InbreedingCoeff=0.9763;MQ=65.80;MQ0=4;MQRankSum=-6.072;QD=19.58;ReadPosRankSum=4.332;VQSLOD=3.7345;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:26:56.40:443,56,0	1/1:0,4:4:9.03:119,9,0	0/0:29,0:18:24:0,24,292	0/0:16,0:9:8.57:0,9,58	0/0:18,0:18:53.91:0,54,692	0/0:20,0:20:60.05:0,60,866	0/0:15,0:15:37.68:0,38,623	1/1:24,3:25:59.04:489,59,0	0/0:8,0:8:24.06:0,24,366	1/1:2,18:20:21.85:525,22,0	1/1:0,13:13:27.02:333,27,0	0/0:21,0:20:50.49:0,50,724	0/0:16,0:16:48.07:0,48,681	0/0:17,0:17:51.11:0,51,738	0/0:17,0:17:48.13:0,48,762	0/0:35,0:35:99:0,102,1605	1/1:2,32:33:69.22:897,69,0	0/0:35,0:34:79.01:0,79,1376	1/1:21,0:20:39.71:333,40,0	1/1:12,0:12:23.90:186,24,0	1/1:13,0:13:18.92:161,19,0	0/0:16,0:16:41.96:0,42,473	0/0:12,0:12:36.03:0,36,469	0/0:19,0:19:57.19:0,57,964	0/0:19,0:19:57.13:0,57,865	0/0:23,1:24:26.29:0,26,821	1/1:13,0:13:14.84:117,15,0	0/0:8,0:8:24.03:0,24,360
chr10	87738858	.	TTA	T	3435.18	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=1.750;DP=638;FS=0.821;HRun=0;HaplotypeScore=83.5685;InbreedingCoeff=0.6476;MQ=75.92;MQ0=31;MQRankSum=-1.501;QD=16.20;ReadPosRankSum=-1.630;VQSLOD=3.2737;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,35:36:66.15:857,66,0	0/1:8,0:8:28.85:29,0,94	0/0:69,0:30:72.99:0,73,819	0/0:72,0:24:34.43:0,34,373	0/0:20,0:20:51.02:0,51,836	0/0:22,0:22:60.08:0,60,963	0/0:21,0:21:60.05:0,60,876	1/1:5,28:32:86.83:946,87,0	0/0:9,0:7:21.06:0,21,332	0/1:21,0:21:39.11:39,0,200	0/1:18,0:17:60.32:60,0,137	0/0:26,0:26:57.52:0,58,1136	0/0:10,0:8:24.06:0,24,364	0/0:21,0:21:63.17:0,63,1020	0/0:17,0:17:48.11:0,48,710	0/0:24,0:24:69.19:0,69,1123	0/1:35,0:32:11.51:12,0,409	0/0:26,0:21:60.14:0,60,924	1/1:0,16:15:45.11:562,45,0	1/1:3,12:14:40.86:486,41,0	1/1:2,10:10:12:142,12,0	0/0:18,0:18:53.95:0,54,786	0/0:17,0:17:47.53:0,48,677	0/0:13,0:12:36.11:0,36,599	0/0:11,0:11:32.93:0,33,462	0/0:17,0:17:50.10:0,50,718	1/1:2,13:15:24.05:303,24,0	0/0:13,0:13:36.11:0,36,578
chr10	87739897	.	C	CT	5462.39	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-4.464;DP=470;FS=0.385;HRun=1;HaplotypeScore=50.0996;InbreedingCoeff=0.9508;MQ=86.29;MQ0=0;MQRankSum=-1.712;QD=41.70;ReadPosRankSum=-0.115;VQSLOD=4.9300;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:75.25:1124,75,0	0/0:6,0:6:15.05:0,15,195	0/0:12,0:12:33.08:0,33,394	0/0:20,0:21:54.13:0,54,652	0/0:6,0:6:18.06:0,18,233	0/0:9,0:9:27.09:0,27,350	0/0:31,0:31:93.30:0,93,1207	1/1:4,21:25:63.20:922,63,0	0/0:25,0:25:72.21:0,72,918	0/0:13,0:13:39.12:0,39,495	0/0:6,0:6:18.06:0,18,234	0/0:38,0:38:99:0,114,1479	0/0:11,0:11:33.11:0,33,428	0/0:21,0:21:60.20:0,60,779	0/0:9,0:9:27.09:0,27,351	0/0:33,0:33:87.27:0,87,1116	0/0:25,0:25:72.18:0,72,899	0/0:20,0:20:57.19:0,57,740	1/1:2,9:11:30.10:449,30,0	1/1:0,4:4:12.04:180,12,0	1/1:0,57:57:99:2427,163,0	0/0:4,0:4:9.03:0,9,116	0/0:2,0:2:6.02:0,6,78	0/0:19,0:19:57.19:0,57,740	0/0:9,0:9:27.09:0,27,351	0/0:14,0:14:42.13:0,42,533	1/1:0,8:8:24.08:360,24,0	0/0:5,0:5:15.05:0,15,195
chr10	87745759	.	TTCTCTCTCTCTCTC	T	1351.76	PASS	AB=0.884;AC=12;AF=0.261;AN=46;BaseQRankSum=5.263;DP=552;FS=17.260;HRun=0;HaplotypeScore=211.1833;InbreedingCoeff=0.5895;MQ=68.43;MQ0=22;MQRankSum=-2.608;QD=9.20;ReadPosRankSum=1.346;VQSLOD=1.2652;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,8:32:0:0,0,0	1/1:4,1:6:5.30:154,5,0	./.	0/0:45,0:26:0:0,0,0	./.	0/0:14,0:14:15.05:0,15,474	0/0:18,0:19:9.03:0,9,282	./.	0/0:12,0:11:18.03:0,18,456	1/1:15,4:21:19.51:651,20,0	./.	0/0:20,0:20:18.06:0,18,845	0/0:18,0:18:18.05:0,18,738	0/0:9,0:8:9.03:0,9,452	0/0:7,0:7:6.02:0,6,261	0/0:17,0:25:21.03:0,21,491	1/1:20,2:21:12.02:285,12,0	0/0:12,0:13:12.04:0,12,492	1/1:24,1:24:3.70:195,4,0	./.	0/1:31,0:27:39.60:40,0,85	0/0:18,0:19:18.04:0,18,605	0/0:14,0:14:9.03:0,9,312	0/0:38,0:44:39.13:0,39,1548	0/0:13,0:12:3.01:0,3,75	0/0:25,0:25:9.03:0,9,382	1/1:5,3:8:6.02:170,6,0	0/0:8,0:8:3.01:0,3,133
chr10	87745816	.	TGTGTGC	T	785.29	PASS	AB=0.821;AC=6;AF=0.111;AN=54;BaseQRankSum=6.397;DP=531;FS=30.758;HRun=0;HaplotypeScore=115.4674;InbreedingCoeff=0.5628;MQ=43.76;MQ0=50;MQRankSum=-7.433;QD=13.54;ReadPosRankSum=-1.380;VQSLOD=1.0768;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:34:6.83:0,7,788	0/1:4,5:9:60:89,0,60	0/0:29,0:3:9.03:0,9,117	0/0:37,0:1:3.01:0,3,36	0/0:9,0:9:18.06:0,18,424	0/0:14,0:13:27.09:0,27,627	0/0:24,0:20:16.29:0,16,724	0/0:22,0:20:41.67:0,42,773	0/0:16,0:16:38.96:0,39,858	1/1:11,7:16:43.75:560,44,0	./.	0/0:22,0:21:48.09:0,48,1096	0/0:12,0:12:15.97:0,16,446	0/0:13,0:12:15.04:0,15,266	0/0:20,0:19:48.64:0,49,1235	0/0:24,0:23:50.92:0,51,1055	1/1:14,5:15:28.75:263,29,0	0/0:14,0:12:28.34:0,28,617	0/0:13,0:10:26.90:0,27,476	0/0:9,0:6:9.03:0,9,228	0/0:30,0:24:26.92:0,27,667	0/1:12,0:12:2.35:2,0,345	0/0:13,0:12:23.63:0,24,517	0/0:48,0:46:76.34:0,76,1768	0/0:15,0:15:30.10:0,30,807	0/0:21,0:18:48.08:0,48,1086	0/0:14,0:14:32.09:0,32,522	0/0:7,0:5:15.05:0,15,346
chr10	87745836	.	TGTGTGC	T	761.02	PASS	AB=0.964;AC=11;AF=0.212;AN=52;BaseQRankSum=5.975;DP=569;FS=3.754;HRun=0;HaplotypeScore=134.8585;InbreedingCoeff=0.1410;MQ=45.43;MQ0=48;MQRankSum=-1.598;QD=3.77;ReadPosRankSum=-3.112;VQSLOD=1.4183;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:33:6.22:0,6,880	0/1:7,0:7:18.30:45,0,18	0/1:28,0:2:0.96:1,0,10	./.	0/0:10,0:10:26.53:0,27,343	0/1:15,0:14:37.57:38,0,309	0/1:30,1:27:78.63:79,0,266	0/0:27,0:22:53.61:0,54,317	0/0:18,0:18:40.17:0,40,682	1/1:18,0:15:27.08:243,27,0	./.	0/0:23,0:22:54.34:0,54,975	0/0:13,0:12:13.60:0,14,491	0/0:12,0:12:6.79:0,7,170	0/0:19,0:19:50.58:0,51,887	0/0:22,0:21:48.07:0,48,1143	1/1:21,1:17:3.38:119,3,0	0/0:17,0:15:23.97:0,24,267	0/0:12,0:10:17.70:0,18,125	0/0:10,0:8:8.96:0,9,148	0/0:43,0:38:53.40:0,53,931	0/1:15,0:15:28.11:28,0,293	0/1:12,3:14:40.16:40,0,230	0/1:48,3:49:99:313,0,1007	0/0:16,0:16:32.53:0,33,524	0/0:24,0:22:32.20:0,32,473	0/0:12,0:12:27.53:0,28,477	0/0:8,0:6:15.01:0,15,323
chr10	87745840	.	TGC	T	735.46	PASS	AB=0.965;AC=17;AF=0.315;AN=54;BaseQRankSum=7.879;DP=574;FS=0.000;HRun=0;HaplotypeScore=103.0480;InbreedingCoeff=0.0383;MQ=46.04;MQ0=47;MQRankSum=-0.885;QD=2.64;ReadPosRankSum=-2.694;VQSLOD=1.5904;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:32:13.81:14,0,565	0/1:10,0:10:15.93:67,0,16	0/1:24,0:2:0.96:1,0,10	./.	0/0:9,0:9:22.41:0,22,203	0/0:15,0:14:4.24:0,4,120	0/1:30,2:28:99:134,0,153	0/0:30,0:24:59.76:0,60,380	0/0:18,0:18:39.90:0,40,441	1/1:18,0:14:24.98:199,25,0	1/1:8,0:7:3:25,3,0	0/0:23,0:22:35.71:0,36,669	0/1:14,0:13:7.66:8,0,258	0/1:11,0:11:17.68:18,0,106	0/0:19,0:19:22.61:0,23,485	0/0:21,0:20:8.45:0,8,578	1/1:18,1:14:17.99:143,18,0	0/1:14,3:14:86.17:86,0,137	0/0:13,0:12:18.62:0,19,100	0/0:10,0:8:8.96:0,9,100	0/0:47,0:43:36.35:0,36,627	0/1:14,1:15:6.97:7,0,119	0/0:16,0:15:7:0,7,175	0/1:52,1:52:99:137,0,469	0/0:18,0:18:35.46:0,35,400	0/0:23,0:21:31.80:0,32,357	0/1:12,0:12:51.20:51,0,190	0/1:8,1:7:6.39:6,0,122
chr10	87745842	.	C	CGT	894.81	PASS	AB=0.902;AC=14;AF=0.280;AN=50;BaseQRankSum=2.989;DP=574;FS=6.600;HRun=0;HaplotypeScore=108.1320;InbreedingCoeff=0.2697;MQ=46.14;MQ0=48;MQRankSum=1.042;QD=4.22;ReadPosRankSum=-0.773;VQSLOD=2.0428;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:30:17.61:0,18,310	1/1:10,0:10:2.22:7,2,0	./.	./.	0/0:8,0:9:14.87:0,15,138	1/1:16,1:16:16.86:167,17,0	1/1:32,0:29:3.84:94,4,0	0/0:32,0:27:4.06:0,4,49	0/0:19,0:19:23.78:0,24,233	0/0:16,0:12:3.98:0,4,17	./.	0/0:23,0:22:35.89:0,36,336	0/0:11,0:10:18.01:0,18,194	0/0:11,0:11:10.59:0,11,64	0/0:19,0:21:26.72:0,27,247	0/0:21,0:21:43.81:0,44,422	0/1:18,0:14:2.49:59,0,2	0/1:17,0:14:9.62:10,0,14	0/0:14,0:14:4.84:0,5,37	0/0:8,0:6:3.01:0,3,33	0/0:44,1:43:5.67:0,6,353	0/1:10,0:15:25.56:57,0,26	0/1:16,0:15:53.62:54,0,54	1/1:43,4:50:47.32:461,47,0	0/0:17,0:18:20.65:0,21,160	0/1:24,0:21:20.69:105,0,21	0/0:12,0:13:20.90:0,21,162	0/1:5,3:8:33.23:33,0,47
chr10	87748603	.	GGGT	G	5504.38	PASS	AB=0.832;AC=50;AF=0.926;AN=54;BaseQRankSum=-2.935;DP=334;FS=6.696;HRun=0;HaplotypeScore=65.0902;InbreedingCoeff=0.0876;MQ=60.29;MQ0=2;MQRankSum=-1.278;QD=17.42;ReadPosRankSum=0.911;VQSLOD=3.8554;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:27.04:341,27,0	1/1:2,0:2:2.98:22,3,0	0/1:7,2:7:1.21:127,0,1	0/1:9,2:8:18.38:203,0,18	./.	1/1:15,0:15:24.07:322,24,0	1/1:28,0:28:35.98:462,36,0	1/1:10,0:10:26.53:230,27,0	1/1:14,0:14:27.08:342,27,0	1/1:15,0:15:34.34:340,34,0	1/1:8,0:8:8.77:115,9,0	1/1:14,0:14:21.06:258,21,0	1/1:9,0:9:21.01:232,21,0	1/1:15,0:15:20.81:291,21,0	1/1:16,0:16:30.09:359,30,0	1/1:15,0:15:32.96:361,33,0	1/1:16,0:16:15.01:164,15,0	1/1:10,0:9:11.78:142,12,0	1/1:10,0:10:23.35:163,23,0	0/0:10,0:10:0.47:0,0,1	1/1:10,0:10:3.01:52,3,0	1/1:9,0:9:2.35:51,2,0	1/1:11,0:11:8.18:112,8,0	1/1:14,0:13:14.71:203,15,0	1/1:4,1:5:3.01:34,3,0	1/1:18,0:18:41.80:295,42,0	1/1:6,1:7:15.04:175,15,0	1/1:6,0:6:11.93:108,12,0
chr10	87748607	.	GT	G	2384.44	PASS	AB=0.943;AC=48;AF=0.889;AN=54;BaseQRankSum=-2.925;DP=317;FS=22.773;HRun=1;HaplotypeScore=65.1119;InbreedingCoeff=0.2295;MQ=61.88;MQ0=5;MQRankSum=-4.097;QD=7.79;ReadPosRankSum=2.477;VQSLOD=-0.6317;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:21.81:132,22,0	./.	0/1:11,1:7:14.37:35,0,14	0/1:13,3:9:32.38:32,0,48	0/1:6,0:6:0:0,0,0	1/1:15,0:15:17.50:107,17,0	1/1:27,0:27:33.60:206,34,0	1/1:9,0:9:18.86:98,19,0	1/1:15,0:15:24.81:152,25,0	1/1:14,0:14:30.77:156,31,0	1/1:7,0:7:4.25:20,4,0	1/1:12,0:12:20.71:135,21,0	1/1:7,0:7:14.76:94,15,0	1/1:15,0:15:20.61:134,21,0	1/1:15,0:15:29.60:194,30,0	1/1:15,0:15:32.42:212,32,0	1/1:11,0:11:14.81:103,15,0	1/1:9,0:8:11.50:81,12,0	1/1:9,0:9:20.27:110,20,0	0/0:10,0:10:0.47:0,0,1	1/1:10,0:10:2.88:15,3,0	1/1:7,0:7:2.86:15,3,0	1/1:11,0:11:8.37:51,8,0	1/1:14,0:13:12.35:74,12,0	0/1:5,0:5:0:0,0,0	1/1:17,0:17:40.73:233,41,0	1/1:6,0:6:13.67:84,14,0	1/1:3,0:3:2.68:11,3,0
chr10	87748902	.	CAA	C	367.97	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.516;DP=318;FS=2.485;HRun=9;HaplotypeScore=47.1084;InbreedingCoeff=0.8250;MQ=67.80;MQ0=0;MQRankSum=-0.566;QD=24.53;ReadPosRankSum=-2.461;VQSLOD=2.2780;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:56.40:0,56,885	0/0:3,0:3:9.03:0,9,148	0/0:19,0:17:29.63:0,30,364	0/0:14,0:11:17.85:0,18,256	1/1:0,10:10:30.09:344,30,0	0/0:8,0:9:26.58:0,27,401	0/0:3,0:3:9.03:0,9,148	0/0:17,0:17:48.13:0,48,755	1/1:1,4:5:12.04:140,12,0	0/0:20,0:20:59.68:0,60,912	0/0:18,0:18:51.11:0,51,777	0/0:3,0:3:9.03:0,9,148	0/0:12,0:12:36.09:0,36,562	0/0:5,0:5:12.04:0,12,196	0/0:8,0:8:24.07:0,24,370	0/0:12,0:12:36.08:0,36,539	0/0:3,0:10:17.47:0,17,61	0/0:9,0:9:27.09:0,27,443	0/0:24,0:24:63.20:0,63,1009	0/0:19,0:19:57.19:0,57,934	0/0:7,0:7:18.05:0,18,272	0/0:3,0:3:9.03:0,9,148	0/0:5,0:5:12.04:0,12,197	0/0:5,0:5:12.04:0,12,196	0/0:15,0:15:45.15:0,45,738	0/0:9,0:9:27.09:0,27,443	0/0:23,0:23:66.23:0,66,1082	0/0:11,0:11:33.10:0,33,509
chr10	87748936	.	C	CA	401.08	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.306;DP=364;FS=23.403;HRun=9;HaplotypeScore=43.2490;InbreedingCoeff=0.6963;MQ=54.65;MQ0=1;MQRankSum=-3.219;QD=21.11;ReadPosRankSum=-0.941;VQSLOD=1.9777;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:62.91:0,63,539	0/0:1,0:1:3:0,3,26	0/0:8,0:7:11.36:0,11,84	0/0:4,0:4:5.98:0,6,48	0/0:17,0:17:47.99:0,48,416	0/0:17,0:17:44.98:0,45,390	0/0:9,0:9:23.99:0,24,208	0/0:17,0:17:41.97:0,42,364	0/0:7,0:7:21:0,21,182	0/0:18,1:19:14.81:0,15,357	0/0:15,0:16:37.93:0,38,310	0/0:7,0:7:17.99:0,18,156	0/0:15,0:15:38.98:0,39,338	0/0:7,0:7:14.98:0,15,130	0/0:7,0:7:21:0,21,182	0/0:15,0:15:38.99:0,39,338	1/1:4,15:18:45.12:496,45,0	0/0:9,0:9:20.96:0,21,177	0/0:24,1:25:42.25:0,42,500	0/0:15,0:15:41.99:0,42,364	0/0:16,0:16:38.98:0,39,338	0/0:6,0:6:15:0,15,130	0/0:7,0:7:21:0,21,182	0/0:5,0:5:12:0,12,104	0/0:13,0:13:35.99:0,36,312	0/0:16,0:16:38.98:0,39,339	0/0:29,0:29:74.92:0,75,646	0/0:12,0:12:23.99:0,24,208
chr10	87749266	.	G	GC	5412.51	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-6.801;DP=409;FS=22.170;HRun=5;HaplotypeScore=42.6926;InbreedingCoeff=0.9861;MQ=76.49;MQ0=0;MQRankSum=0.127;QD=32.03;ReadPosRankSum=1.421;VQSLOD=2.8390;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:30:72.23:946,72,0	1/1:1,4:5:12.04:158,12,0	0/0:12,0:11:16.97:0,17,169	0/0:10,0:10:20.58:0,21,207	0/0:8,0:8:21.05:0,21,225	0/0:12,0:12:36.08:0,36,379	0/0:22,0:22:48.05:0,48,500	1/1:2,16:18:45.12:563,45,0	0/0:12,0:12:33.08:0,33,353	1/1:1,12:13:36.11:460,36,0	1/1:0,6:7:21.06:265,21,0	0/0:13,0:13:33.05:0,33,344	0/0:17,0:17:51.10:0,51,537	0/0:16,0:16:48.11:0,48,509	0/0:21,0:21:63.16:0,63,676	0/0:10,0:10:27.05:0,27,281	1/1:3,30:33:81.26:1066,81,0	0/0:25,0:25:66.16:0,66,708	1/1:3,12:15:39.03:431,39,0	1/1:0,8:8:23.99:293,24,0	1/1:4,27:31:43.02:915,43,0	0/0:9,0:9:27.07:0,27,290	0/0:6,0:6:15.04:0,15,161	0/0:18,0:18:48.10:0,48,506	0/0:12,0:12:33.08:0,33,353	0/0:11,0:11:30.08:0,30,322	1/1:0,9:9:24.08:316,24,0	0/0:6,0:6:15.04:0,15,161
chr10	87749619	.	CTGTG	C	1165.06	PASS	AB=0.805;AC=14;AF=0.259;AN=54;BaseQRankSum=3.423;DP=823;FS=2.241;HRun=0;HaplotypeScore=144.9275;InbreedingCoeff=0.3473;MQ=56.44;MQ0=22;MQRankSum=-0.292;QD=4.18;ReadPosRankSum=-1.444;VQSLOD=2.3088;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,25:47:17.17:230,17,0	0/1:5,0:8:25.60:35,0,26	0/0:39,0:19:1.25:0,1,3	./.	0/0:10,0:11:17.80:0,18,347	0/0:21,0:22:40.95:0,41,820	0/0:34,0:38:56.90:0,57,1118	0/1:47,0:43:23.14:103,0,23	0/0:26,0:27:50.91:0,51,1083	0/1:13,1:25:60.28:60,0,107	0/0:5,0:8:10.98:0,11,49	0/0:38,0:42:54.17:0,54,1212	0/0:33,0:37:48.09:0,48,1085	0/0:31,0:34:68.59:0,69,1233	0/0:45,0:52:99:0,112,2017	0/0:35,1:36:21.26:0,21,1396	0/1:17,1:30:37.44:37,0,102	0/0:23,0:24:44.65:0,45,727	1/1:22,0:19:3.61:112,4,0	1/1:4,7:11:15.05:236,15,0	0/1:38,20:57:53.08:353,0,53	0/0:16,0:16:26.97:0,27,455	0/1:13,0:13:21.42:21,0,364	0/0:51,0:52:98.90:0,99,2093	0/0:17,0:17:30.06:0,30,622	0/0:29,0:28:45.07:0,45,811	1/1:7,9:16:9.03:144,9,0	0/0:10,0:10:24.08:0,24,573
chr10	87752277	.	G	GA	247.56	PASS	AB=0.722;AC=7;AF=0.125;AN=56;BaseQRankSum=7.147;DP=632;FS=3.240;HRun=0;HaplotypeScore=79.2060;InbreedingCoeff=0.7920;MQ=70.34;MQ0=0;MQRankSum=-6.689;QD=8.84;ReadPosRankSum=-1.516;VQSLOD=3.4320;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,150,2054	1/1:3,1:4:7.95:55,8,0	0/0:25,0:23:63.03:0,63,831	0/0:21,0:21:60.17:0,60,786	0/0:18,0:18:54.15:0,54,717	0/0:28,0:27:81.23:0,81,1080	0/0:43,0:43:99:0,126,1688	0/0:28,0:28:75.24:0,75,1030	0/0:18,0:18:54.16:0,54,737	1/1:5,4:9:23.72:180,24,0	1/1:2,0:2:2.60:10,3,0	0/0:33,0:33:99:0,99,1327	0/0:20,0:20:60.18:0,60,819	0/0:22,0:22:66.22:0,66,919	0/0:20,0:20:60.20:0,60,834	0/0:23,0:23:69.23:0,69,964	0/1:8,5:13:4.47:132,0,4	0/0:28,0:28:84.26:0,84,1152	0/0:14,0:14:39.13:0,39,540	0/0:7,0:7:21.07:0,21,294	0/0:60,0:60:99:0,175,2375	0/0:20,0:20:57.16:0,57,756	0/0:19,0:19:54.15:0,54,731	0/0:33,0:33:96.32:0,96,1340	0/0:27,0:27:75.23:0,75,1020	0/0:21,0:20:57.15:0,57,733	0/0:15,0:15:45.12:0,45,592	0/0:10,0:9:27.08:0,27,362
chr10	87753222	.	GTTTTGT	G	2810.34	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.734;DP=539;FS=2.498;HRun=0;HaplotypeScore=113.6485;InbreedingCoeff=0.9825;MQ=70.12;MQ0=7;MQRankSum=-5.834;QD=45.33;ReadPosRankSum=-2.254;VQSLOD=3.2161;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:76.68:0,77,1513	1/1:2,9:11:20.84:370,21,0	0/0:43,0:16:33.04:0,33,600	0/0:55,0:21:31.90:0,32,585	0/0:23,0:23:69.23:0,69,1927	0/0:20,0:20:57.19:0,57,1912	0/0:12,0:12:30.10:0,30,1017	0/0:26,0:26:64.44:0,64,1896	0/0:10,0:10:30.09:0,30,943	1/1:0,26:26:75.07:1586,75,0	1/1:1,9:10:24:457,24,0	0/0:14,0:14:42.14:0,42,1298	0/0:8,0:8:24.07:0,24,668	0/0:13,0:13:39.13:0,39,1258	0/0:13,0:13:36.11:0,36,1088	0/0:14,0:14:39.13:0,39,1324	1/1:3,12:15:24.08:556,24,0	0/0:30,0:30:87.23:0,87,2527	0/0:19,0:18:12.99:0,13,706	0/0:16,0:16:16.23:0,16,739	0/0:17,0:17:42.11:0,42,1206	0/0:12,0:12:36.09:0,36,1023	0/0:7,0:7:18.02:0,18,551	0/0:12,0:12:22.08:0,22,903	0/0:23,0:23:66.22:0,66,2018	0/0:33,0:33:99:0,99,3128	0/0:18,0:17:24.22:0,24,646	0/0:12,0:12:33.09:0,33,1001
chr10	87753227	.	GT	G	2163.60	PASS	AB=0.963;AC=17;AF=0.304;AN=56;BaseQRankSum=11.777;DP=526;FS=5.838;HRun=9;HaplotypeScore=67.0716;InbreedingCoeff=0.9248;MQ=70.70;MQ0=5;MQRankSum=-3.257;QD=11.63;ReadPosRankSum=1.294;VQSLOD=2.9273;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:79.86:719,80,0	1/1:9,0:9:16.81:80,17,0	0/0:40,2:17:32.36:0,32,312	0/1:49,1:20:6.17:6,0,168	0/0:24,0:24:69.04:0,69,775	0/0:19,0:19:54.16:0,54,623	0/0:12,0:12:33.09:0,33,371	0/0:26,0:26:57.13:0,57,625	0/0:11,0:11:30.07:0,30,335	1/1:26,0:26:58.33:266,58,0	1/1:9,0:9:16.60:75,17,0	0/0:14,0:14:36.11:0,36,415	0/0:9,0:9:24.07:0,24,276	0/0:15,0:15:42.12:0,42,476	0/0:12,0:12:30.08:0,30,336	0/0:13,0:13:39.12:0,39,450	1/1:12,0:12:22.14:100,22,0	0/0:30,0:30:81.20:0,81,919	1/1:4,12:15:36.02:329,36,0	1/1:0,16:16:48.03:439,48,0	0/0:14,0:14:33.10:0,33,381	0/0:11,0:11:30.09:0,30,346	0/0:8,0:8:18.05:0,18,208	0/0:13,0:14:22.80:0,23,347	0/0:23,0:23:63.19:0,63,727	0/0:32,0:32:84.25:0,84,969	1/1:1,17:18:39.02:357,39,0	0/0:11,0:11:30.09:0,30,346
chr10	87754651	.	C	CCA	2525.55	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.069;DP=514;FS=1.751;HRun=0;HaplotypeScore=82.4966;InbreedingCoeff=0.9953;MQ=76.07;MQ0=0;MQRankSum=-1.122;QD=37.69;ReadPosRankSum=2.745;VQSLOD=5.6765;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.13:0,60,774	1/1:1,7:8:21.04:332,21,0	0/0:18,0:18:53.53:0,54,577	0/0:17,0:15:25.80:0,26,317	0/0:22,0:22:56.89:0,57,661	0/0:13,0:13:35.66:0,36,431	0/0:24,0:24:63.12:0,63,814	0/0:20,0:20:51.08:0,51,641	0/0:30,0:30:90.21:0,90,1176	1/1:0,11:12:33.10:544,33,0	1/1:3,8:12:18.05:309,18,0	0/0:18,0:18:51.17:0,51,738	0/0:15,0:15:42.14:0,42,608	0/0:12,0:12:33.10:0,33,458	0/0:24,0:24:72.19:0,72,964	0/0:18,0:18:48.10:0,48,636	1/1:1,33:35:87.29:1500,87,0	0/0:20,0:20:54.14:0,54,727	0/0:21,0:21:63.06:0,63,765	0/0:10,0:10:23.33:0,23,273	0/0:23,0:23:51.08:0,51,624	0/0:18,0:18:54.18:0,54,778	0/0:16,0:16:39.10:0,39,508	0/0:20,0:20:60.11:0,60,758	0/0:18,0:18:48.11:0,48,609	0/0:17,0:17:51.07:0,51,594	0/0:18,0:18:51.11:0,51,664	0/0:13,0:13:36.04:0,36,428
chr10	87755067	.	A	ATC	1691.08	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.698;DP=496;FS=2.417;HRun=0;HaplotypeScore=59.5265;InbreedingCoeff=0.8858;MQ=62.68;MQ0=7;MQRankSum=-3.488;QD=29.67;ReadPosRankSum=-1.176;VQSLOD=4.5569;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:78.25:0,78,1172	1/1:0,5:1:3.01:58,3,0	0/0:23,0:11:32.45:0,32,397	0/0:27,0:17:1.85:0,2,472	0/0:14,0:14:42.14:0,42,643	0/0:23,0:23:66.19:0,66,967	0/0:13,0:13:39.13:0,39,597	0/0:38,0:38:99:0,114,1720	0/0:14,0:14:42.14:0,42,641	1/1:0,6:8:24.02:360,24,0	1/1:1,10:10:18.06:347,18,0	0/0:14,0:14:42.14:0,42,640	0/0:14,0:14:42.13:0,42,619	0/0:20,0:20:54.17:0,54,805	0/0:17,0:17:48.15:0,48,714	0/0:18,0:18:54.15:0,54,784	1/1:4,29:28:57.20:1076,57,0	0/0:27,0:27:72.24:0,72,1102	0/0:11,0:11:24.08:0,24,368	0/0:5,0:5:15.03:0,15,208	0/0:35,0:35:99:0,105,1603	0/0:13,0:13:39.13:0,39,587	0/0:9,0:9:27.07:0,27,390	0/0:17,0:17:45.14:0,45,670	0/0:8,0:8:24.08:0,24,364	0/0:21,0:20:57.17:0,57,832	0/0:18,0:18:54.11:0,54,757	0/0:11,0:11:33.11:0,33,502
chr10	87755182	.	C	CAAATAAATAAATAAAT	1304.84	PASS	AB=1.000;AC=7;AF=0.140;AN=50;BaseQRankSum=2.101;DP=300;FS=0.000;HRun=0;HaplotypeScore=123.4662;InbreedingCoeff=0.3969;MQ=55.69;MQ0=4;MQRankSum=-4.649;QD=29.00;ReadPosRankSum=-0.456;VQSLOD=2.4388;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:45.15:0,45,1648	./.	./.	0/0:2,0:1:3.01:0,3,42	0/0:11,0:11:18.06:0,18,586	0/0:17,0:17:45.15:0,45,1746	0/0:5,0:5:9:0,9,122	0/0:33,0:29:51.17:0,51,1449	0/0:8,0:8:6.02:0,6,194	1/1:4,0:4:0.47:1,0,0	1/1:4,1:6:3.01:227,3,0	0/0:8,0:7:6.01:0,6,157	./.	0/0:7,0:7:6.02:0,6,233	0/0:12,0:12:9.03:0,9,392	0/0:11,0:11:21.04:0,21,652	1/1:15,2:16:15.05:997,15,0	0/0:17,0:17:36.12:0,36,1536	0/0:17,0:16:30.10:0,30,1030	0/0:14,0:14:9.03:0,9,349	0/0:7,0:7:9.03:0,9,308	0/0:10,0:10:3.01:0,3,72	0/0:16,0:16:9.03:0,9,382	0/0:6,0:6:1.55:0,2,101	0/0:8,0:8:15.05:0,15,602	0/1:18,0:18:99:191,0,1251	0/0:14,0:13:27.09:0,27,1011	0/0:7,0:7:9.03:0,9,395
chr10	87755351	.	C	CT	751.92	PASS	AB=0.889;AC=9;AF=0.161;AN=56;BaseQRankSum=-1.981;DP=460;FS=9.666;HRun=10;HaplotypeScore=47.1452;InbreedingCoeff=0.7353;MQ=68.34;MQ0=6;MQRankSum=0.730;QD=12.13;ReadPosRankSum=-0.192;VQSLOD=1.8350;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:29.01:0,29,650	1/1:0,1:1:3.01:32,3,0	0/0:18,0:8:11.02:0,11,79	0/0:16,0:11:2.59:0,3,117	0/1:14,2:16:20.80:21,0,250	0/0:15,0:15:35.88:0,36,279	0/0:16,0:15:35.95:0,36,296	0/0:32,0:31:69.48:0,69,549	0/0:9,0:9:23.96:0,24,197	1/1:5,6:11:21.01:206,21,0	1/1:3,9:11:21.05:223,21,0	0/0:12,0:12:28.78:0,29,226	0/0:11,0:11:23.90:0,24,191	0/0:9,0:9:14.54:0,15,122	0/0:10,0:11:23:0,23,178	0/0:13,0:13:7.42:0,7,220	1/1:7,15:22:41.59:425,42,0	0/0:31,0:30:74.89:0,75,613	0/0:34,0:34:89.84:0,90,730	0/0:13,0:13:20.97:0,21,172	0/0:30,0:31:77.80:0,78,623	0/0:6,0:5:14.97:0,15,121	0/0:11,0:11:32.94:0,33,268	0/0:19,0:19:53.87:0,54,434	0/0:9,0:9:26.97:0,27,222	0/0:20,0:19:15.68:0,16,319	0/0:14,0:14:23.94:0,24,197	0/0:10,0:11:17:0,17,129
chr10	87757011	.	TA	T	1168.69	PASS	AB=0.939;AC=10;AF=0.179;AN=56;BaseQRankSum=7.819;DP=514;FS=22.512;HRun=1;HaplotypeScore=127.2114;InbreedingCoeff=0.7223;MQ=62.85;MQ0=19;MQRankSum=-8.928;QD=8.99;ReadPosRankSum=1.484;VQSLOD=-0.0625;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,16:30:50.57:379,51,0	0/0:7,0:7:8.45:0,8,62	0/0:43,2:11:5.90:0,6,38	0/0:44,1:14:18.39:0,18,124	0/0:22,0:22:23.66:0,24,363	0/0:19,0:19:57.02:0,57,522	0/0:8,0:7:17.90:0,18,153	0/0:32,0:32:12.67:0,13,437	0/0:10,0:10:25.93:0,26,240	0/0:25,0:23:30.09:0,30,257	0/0:23,1:24:6.53:0,7,126	0/0:12,0:12:29.65:0,30,277	0/0:8,0:8:16.97:0,17,148	0/1:10,1:11:5.42:5,0,155	0/0:15,0:15:33.20:0,33,289	0/0:5,0:5:15.01:0,15,151	0/1:24,1:25:4.92:5,0,110	0/0:27,0:27:77.76:0,78,688	1/1:11,2:12:22.39:200,22,0	1/1:17,13:29:48.08:383,48,0	0/0:11,0:8:20.53:0,21,168	0/0:5,0:5:11.98:0,12,104	0/0:11,0:11:32.94:0,33,282	0/0:4,0:4:11.69:0,12,97	0/0:17,0:16:42.27:0,42,383	0/0:22,0:22:65.45:0,65,613	1/1:13,7:20:54.72:358,55,0	0/0:7,0:7:18.02:0,18,175
chr10	87757012	.	AT	A	856.02	PASS	AB=0.984;AC=15;AF=0.268;AN=56;BaseQRankSum=2.701;DP=527;FS=0.952;HRun=15;HaplotypeScore=129.0334;InbreedingCoeff=0.3841;MQ=61.07;MQ0=22;MQRankSum=1.100;QD=3.21;ReadPosRankSum=1.374;VQSLOD=0.9006;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:30:22.60:23,0,37	1/1:2,5:7:14.70:95,15,0	0/0:49,0:11:3.34:0,3,56	0/1:52,0:13:0.49:0,0,10	0/0:25,0:25:17.62:0,18,254	0/0:19,0:19:40.20:0,40,158	0/0:8,0:7:6.99:0,7,26	0/1:32,0:33:14.75:15,0,229	0/0:11,0:11:17.95:0,18,146	1/1:8,15:22:34.50:266,34,0	1/1:5,18:24:50.26:307,50,0	0/0:12,0:12:26.72:0,27,216	0/0:9,0:9:8.69:0,9,73	0/1:10,1:11:11.62:12,0,138	0/1:15,0:15:6.81:7,0,151	0/0:6,0:6:12:0,12,105	1/1:6,20:26:43.83:274,44,0	0/0:27,0:27:44.45:0,44,166	0/1:13,0:12:0.43:19,0,0	0/1:30,0:29:8.47:8,0,126	0/0:11,0:8:14.99:0,15,128	0/0:4,0:4:7.77:0,8,33	0/0:11,0:11:15.33:0,15,63	0/0:4,0:4:7.34:0,7,26	0/0:17,0:16:32.68:0,33,265	0/0:20,1:21:20.89:0,21,117	0/0:18,0:18:3.92:0,4,103	0/0:7,0:7:13.51:0,14,57
chr10	87757013	.	T	TG	808.14	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.312;DP=539;FS=7.054;HRun=0;HaplotypeScore=132.4178;InbreedingCoeff=0.9146;MQ=62.41;MQ0=25;MQRankSum=-10.815;QD=8.78;ReadPosRankSum=2.037;VQSLOD=3.7055;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,2:29:28.53:226,29,0	0/0:7,0:7:20.99:0,21,180	0/0:54,0:12:16.91:0,17,132	0/0:58,0:15:21.42:0,21,118	0/0:25,0:25:56.99:0,57,605	0/0:19,0:19:54.11:0,54,651	0/0:8,0:7:17.99:0,18,190	0/0:32,0:32:71.32:0,71,673	0/0:11,0:11:30:0,30,301	0/0:24,0:22:63.02:0,63,576	0/0:24,0:24:65.92:0,66,574	0/0:12,0:12:35.72:0,36,385	0/0:10,0:10:17.95:0,18,179	0/0:11,0:11:31.25:0,31,312	0/0:16,0:16:39.07:0,39,448	0/0:6,0:6:15.02:0,15,173	0/0:27,0:26:56.93:0,57,481	0/0:27,0:27:77.94:0,78,845	1/1:13,0:12:10.46:150,10,0	1/1:28,2:29:4.74:324,5,0	0/0:12,0:9:21.05:0,21,246	0/0:4,0:4:11.98:0,12,121	0/0:11,0:11:33.05:0,33,352	0/0:4,0:4:11.76:0,12,119	0/0:16,0:15:36.06:0,36,451	0/0:21,0:21:63.16:0,63,777	1/1:18,1:18:49.58:257,50,0	0/0:7,0:7:18.05:0,18,226
chr10	87757024	.	TTTTG	T	953.44	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.572;DP=594;FS=0.543;HRun=0;HaplotypeScore=148.6064;InbreedingCoeff=0.9117;MQ=53.98;MQ0=39;MQRankSum=-7.327;QD=9.93;ReadPosRankSum=1.593;VQSLOD=3.0535;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,16:34:37.35:408,37,0	0/0:5,0:5:14.07:0,14,154	0/0:82,0:13:24.90:0,25,163	0/0:78,0:10:2.26:0,2,54	0/0:22,0:22:48.87:0,49,939	0/0:19,0:18:53.37:0,53,818	0/0:8,0:7:17.65:0,18,209	0/0:31,0:31:84.88:0,85,1277	0/0:7,0:7:21.06:0,21,396	0/0:24,0:22:46.21:0,46,629	0/0:26,0:26:54.09:0,54,719	0/0:9,0:9:27.09:0,27,631	0/0:11,0:11:21.03:0,21,276	0/0:13,0:13:36.09:0,36,625	0/0:16,0:16:42.05:0,42,671	0/0:6,0:6:18.05:0,18,341	0/0:34,0:33:42.15:0,42,633	0/0:29,0:29:81.09:0,81,1112	1/1:9,2:9:19.07:136,19,0	1/1:16,13:28:33.60:310,34,0	0/0:12,0:8:21.06:0,21,398	0/0:4,0:4:11.70:0,12,140	0/0:11,0:11:32.86:0,33,421	0/0:5,0:5:12.03:0,12,177	0/0:15,0:14:39.11:0,39,854	0/0:20,0:20:58.97:0,59,860	1/1:13,7:19:17.29:257,17,0	0/0:10,0:9:18.01:0,18,300
chr10	87757026	.	TTG	T	1155.76	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=8.808;DP=591;FS=1.675;HRun=0;HaplotypeScore=131.8894;InbreedingCoeff=0.8410;MQ=53.74;MQ0=39;MQRankSum=-7.957;QD=6.42;ReadPosRankSum=0.201;VQSLOD=3.1739;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,6:34:25.04:452,25,0	0/0:5,0:5:13.10:0,13,67	0/0:81,0:13:12.82:0,13,126	0/1:79,0:10:5.72:6,0,34	0/0:23,0:23:44.91:0,45,654	0/0:19,0:18:54.07:0,54,642	0/0:7,0:6:17.92:0,18,179	0/0:31,0:31:63.06:0,63,810	0/0:7,0:7:21.05:0,21,281	0/0:23,0:21:51.67:0,52,287	0/0:25,0:25:49.25:0,49,301	0/0:11,0:11:33:0,33,451	0/0:9,0:9:14.70:0,15,158	0/0:12,0:12:32.69:0,33,383	0/0:14,0:14:25.53:0,26,369	0/0:6,0:6:18.05:0,18,234	0/0:35,0:34:68.85:0,69,387	0/0:29,0:29:80.67:0,81,872	1/1:11,3:12:30.33:257,30,0	1/1:25,4:28:20.90:359,21,0	0/0:12,0:8:21.06:0,21,303	0/0:4,0:4:11.97:0,12,117	0/0:8,0:8:24:0,24,275	0/0:6,0:6:15.02:0,15,162	0/0:15,0:14:39.10:0,39,570	0/0:19,0:19:55.52:0,56,624	1/1:22,0:21:9.24:240,9,0	0/0:10,0:9:18.02:0,18,227
chr10	87757039	.	TC	T	1530.42	PASS	AB=0.986;AC=10;AF=0.179;AN=56;BaseQRankSum=6.397;DP=558;FS=0.511;HRun=7;HaplotypeScore=106.3100;InbreedingCoeff=0.7100;MQ=52.28;MQ0=36;MQRankSum=-8.171;QD=10.55;ReadPosRankSum=0.812;VQSLOD=1.9348;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,31:36:48.47:527,48,0	0/0:6,0:5:2.84:0,3,10	0/0:62,1:11:0.37:0,0,92	0/0:72,0:7:7.57:0,8,38	0/0:19,0:19:34.19:0,34,345	0/0:19,0:18:47.92:0,48,446	0/0:8,0:8:20.73:0,21,159	0/0:35,0:34:53.44:0,53,550	0/0:10,0:10:21.01:0,21,208	0/1:20,0:19:0.29:67,0,0	0/0:22,0:21:14.63:0,15,46	0/0:11,0:11:29.96:0,30,298	0/0:9,0:9:18.02:0,18,184	0/0:12,0:12:24.05:0,24,269	0/0:12,0:12:13.27:0,13,138	0/0:6,0:6:15.33:0,15,139	0/1:33,1:33:42.67:66,0,43	0/0:27,0:27:74.95:0,75,695	1/1:1,18:18:47.96:441,48,0	1/1:5,17:22:36.04:345,36,0	0/0:15,0:12:24.05:0,24,269	0/0:5,0:5:12.86:0,13,101	0/0:12,0:12:32.90:0,33,283	0/0:9,0:9:22.23:0,22,184	0/0:17,0:17:36.04:0,36,388	0/0:15,0:13:29.02:0,29,288	1/1:4,9:12:26.99:250,27,0	0/0:8,0:7:15.05:0,15,182
chr10	87758639	.	ATG	A	1601.82	PASS	AB=1.000;AC=21;AF=0.404;AN=52;BaseQRankSum=5.009;DP=756;FS=5.612;HRun=0;HaplotypeScore=132.3672;InbreedingCoeff=0.6208;MQ=53.53;MQ0=23;MQRankSum=0.614;QD=5.20;ReadPosRankSum=-0.667;VQSLOD=2.7680;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:33:23.81:0,24,212	1/1:9,4:14:14.87:144,15,0	./.	./.	0/1:6,0:7:20.53:21,0,103	0/0:16,0:16:5.87:0,6,54	0/1:41,0:40:0.22:1,0,0	1/1:20,8:28:24.50:251,25,0	0/0:32,2:34:23.02:0,23,708	1/1:28,2:31:19.82:181,20,0	1/1:5,4:9:9.02:99,9,0	0/0:31,0:33:5.75:0,6,50	0/0:29,0:29:17.46:0,17,187	0/0:29,0:29:4.96:0,5,52	0/0:36,0:38:34.91:0,35,801	0/0:35,7:42:3.14:0,3,847	1/1:16,23:40:47.79:489,48,0	0/0:13,0:17:21.05:0,21,243	0/0:21,0:21:12.03:0,12,131	0/0:15,0:14:2.68:0,3,24	1/1:41,23:63:30.04:447,30,0	0/0:13,0:13:2.98:0,3,22	1/1:20,0:19:0.42:2,0,0	0/0:37,0:45:2.68:0,3,11	0/1:18,0:18:4.15:4,0,328	1/1:14,0:24:21.24:101,21,0	0/0:28,0:28:26.88:0,27,312	1/1:5,0:8:8.52:42,9,0
chr10	87761301	.	C	CT	1801.58	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-3.473;DP=632;FS=2.273;HRun=10;HaplotypeScore=100.4619;InbreedingCoeff=0.8885;MQ=74.08;MQ0=2;MQRankSum=0.693;QD=16.09;ReadPosRankSum=-0.879;VQSLOD=3.5721;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:40.43:0,40,580	1/1:3,10:14:23.88:225,24,0	0/0:33,0:25:29.77:0,30,221	0/0:16,0:12:6.84:0,7,57	0/0:23,0:23:50.85:0,51,416	0/0:26,0:26:59.75:0,60,476	0/0:25,0:25:53.85:0,54,441	0/0:32,1:34:44.89:0,45,557	0/0:22,0:22:38.90:0,39,317	1/1:10,18:28:13.79:528,14,0	1/1:4,12:19:44.69:415,45,0	0/0:16,0:16:35.83:0,36,284	0/0:19,0:19:38.87:0,39,317	0/0:13,0:13:26.95:0,27,221	0/0:28,0:28:77.45:0,77,616	0/0:23,0:24:46.90:0,47,375	1/1:2,33:36:56.39:789,56,0	0/0:23,0:23:56.93:0,57,468	0/0:24,0:24:50.88:0,51,418	0/0:12,0:12:32.96:0,33,271	0/0:13,0:13:17.13:0,17,129	0/1:14,0:15:1.01:1,0,133	0/0:16,0:16:20.87:0,21,172	0/0:18,0:18:44.90:0,45,365	0/0:18,0:19:29.37:0,29,224	0/0:30,0:30:36.91:0,37,509	0/0:28,0:30:66.92:0,67,525	0/0:14,0:14:17.92:0,18,148
chr10	87762013	.	A	AT	1290.42	PASS	AB=0.697;AC=15;AF=0.268;AN=56;BaseQRankSum=-6.058;DP=495;FS=0.000;HRun=13;HaplotypeScore=69.9596;InbreedingCoeff=0.2678;MQ=77.25;MQ0=0;MQRankSum=1.428;QD=6.52;ReadPosRankSum=1.191;VQSLOD=2.3816;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:35:55.90:0,56,172	0/0:4,0:4:5.93:0,6,41	0/0:27,0:21:0.81:0,1,89	0/0:19,0:14:8.11:0,8,49	0/0:16,0:17:10.16:0,10,166	1/1:3,12:17:2.51:268,3,0	0/1:8,16:24:3.34:243,0,3	0/1:21,1:22:1.32:1,0,133	0/0:13,0:13:17.71:0,18,123	0/0:17,1:18:5.94:0,6,149	0/0:7,0:10:24.48:0,24,139	1/1:6,16:22:15.01:135,15,0	1/1:5,9:15:0.24:122,0,0	0/1:8,13:20:2.61:113,0,3	0/0:14,0:16:7.32:0,7,166	0/0:11,0:11:5.78:0,6,41	0/0:32,0:33:61.23:0,61,410	0/1:8,17:25:2.12:268,0,2	0/0:8,0:22:35.78:0,36,135	0/0:2,0:10:14.23:0,14,41	0/1:18,3:22:15.06:15,0,189	1/1:2,5:7:6.01:56,6,0	0/1:2,4:6:29.02:44,0,29	0/1:7,9:17:28.40:177,0,28	0/0:14,2:16:7.85:0,8,198	0/0:13,0:13:29.67:0,30,201	0/0:6,0:15:19.22:0,19,68	0/0:9,1:14:3.98:0,4,133
chr10	87762929	.	ACTCGACAGT	A	8773.08	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.688;DP=542;FS=3.724;HRun=0;HaplotypeScore=161.6449;InbreedingCoeff=0.9435;MQ=83.90;MQ0=0;MQRankSum=-15.149;QD=56.24;ReadPosRankSum=2.127;VQSLOD=4.7698;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.25:0,78,3196	0/0:2,0:2:6.02:0,6,292	0/0:11,0:11:30.10:0,30,996	0/0:30,0:30:69.65:0,70,2362	0/0:12,0:12:30.10:0,30,1343	1/1:1,16:17:45.15:1160,45,0	1/1:2,20:22:54.66:1651,55,0	0/0:21,0:21:57.15:0,57,2386	0/0:27,0:27:78.25:0,78,3565	0/0:15,0:15:42.14:0,42,1754	0/0:5,0:5:12.04:0,12,545	1/1:3,21:24:45.15:1375,45,0	1/1:2,16:18:39.13:1190,39,0	1/1:2,26:27:63.22:1926,63,0	0/0:23,0:23:69.24:0,69,3336	0/0:25,0:25:69.24:0,69,3259	0/0:26,0:26:75.21:0,75,3460	1/1:3,13:16:21.07:590,21,0	0/0:14,0:14:39.13:0,39,1835	0/0:7,0:7:21.07:0,21,1006	0/0:67,0:67:99:0,202,9212	1/1:3,9:11:14.94:458,15,0	0/0:2,6:8:0.21:0,0,0	1/1:5,14:19:14.71:423,15,0	0/0:10,0:10:30.06:0,30,1088	0/0:21,0:21:60.16:0,60,2678	0/0:18,0:18:51.18:0,51,2365	0/0:15,0:15:45.15:0,45,2126
chr10	87763243	.	C	CAA	3021.27	PASS	AB=0.800;AC=11;AF=0.196;AN=56;BaseQRankSum=0.680;DP=318;FS=11.309;HRun=0;HaplotypeScore=59.1208;InbreedingCoeff=0.7763;MQ=83.47;MQ0=5;MQRankSum=-3.397;QD=26.98;ReadPosRankSum=2.398;VQSLOD=4.0494;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,20:29:60.12:872,60,0	0/0:2,0:2:6.01:0,6,61	0/0:32,0:14:27.71:0,28,323	0/0:23,0:16:13.07:0,13,302	0/0:14,0:14:36.10:0,36,542	0/0:9,0:9:24.05:0,24,243	0/0:12,0:12:21.01:0,21,216	0/0:10,0:10:15.04:0,15,209	0/0:2,0:2:6.02:0,6,93	0/0:4,0:4:5.77:0,6,57	0/0:5,0:5:15.03:0,15,166	0/0:7,0:7:15.03:0,15,156	0/0:5,0:5:12.02:0,12,133	0/0:5,0:5:5.81:0,6,55	0/0:9,0:9:24.55:0,25,370	0/0:6,0:6:18.04:0,18,247	0/0:13,0:13:35.34:0,35,316	0/0:9,0:9:15.03:0,15,155	0/1:12,3:16:5.25:381,0,5	1/1:2,11:13:29.53:407,30,0	0/0:12,0:12:36.11:0,36,553	0/0:6,0:6:5.98:0,6,48	0/0:8,0:8:17.68:0,18,191	0/0:6,0:6:9:0,9,81	0/0:7,0:6:21.06:0,21,316	1/1:3,15:18:46.40:690,46,0	1/1:8,8:19:29.35:389,29,0	1/1:1,12:17:30.09:459,30,0
chr10	87763244	.	C	CA	2926.14	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=2.655;DP=320;FS=3.975;HRun=7;HaplotypeScore=55.6022;InbreedingCoeff=0.7199;MQ=84.53;MQ0=5;MQRankSum=-2.177;QD=12.35;ReadPosRankSum=2.221;VQSLOD=2.3445;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:28:60.92:345,61,0	1/1:0,2:2:6.02:72,6,0	0/0:32,0:15:18.31:0,18,145	0/1:21,0:15:18.76:19,0,114	0/0:15,0:15:35.94:0,36,317	1/1:1,8:9:21.06:251,21,0	1/1:4,8:12:8.82:85,9,0	0/1:8,0:8:2.21:2,0,67	0/0:2,0:2:5.96:0,6,44	1/1:0,4:4:11.98:106,12,0	1/1:2,3:5:9.03:108,9,0	1/1:1,5:7:14.99:163,15,0	1/1:1,4:5:9.03:108,9,0	1/1:1,5:6:6.02:72,6,0	0/0:9,0:9:20.91:0,21,185	0/0:6,0:6:12.02:0,12,116	1/1:7,7:14:33.07:363,33,0	1/1:0,9:9:15.05:180,15,0	1/1:11,1:19:37.95:250,38,0	1/1:12,0:13:29.01:172,29,0	0/0:12,0:12:32.95:0,33,291	1/1:1,5:6:3.01:36,3,0	1/1:3,6:9:12.04:144,12,0	1/1:1,4:6:6.01:62,6,0	0/0:7,0:6:18:0,18,165	1/1:17,0:18:45.91:244,46,0	1/1:14,0:18:32.12:197,32,0	1/1:16,0:17:28.41:142,28,0
chr10	87763420	.	G	GCC	5413.14	PASS	AB=0.526;AC=37;AF=0.661;AN=56;BaseQRankSum=-0.217;DP=479;FS=2.713;HRun=8;HaplotypeScore=74.4928;InbreedingCoeff=0.8612;MQ=79.53;MQ0=1;MQRankSum=-1.857;QD=17.41;ReadPosRankSum=-0.077;VQSLOD=2.8640;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:21:34.93:120,35,0	1/1:1,0:8:9.98:34,10,0	0/0:11,0:11:30.05:0,30,313	0/0:16,0:16:25.46:0,25,348	0/0:12,0:12:24.05:0,24,268	1/1:4,11:15:18.95:288,19,0	1/1:3,21:25:54.18:857,54,0	0/0:21,0:21:27.03:0,27,294	0/0:23,0:24:51:0,51,627	1/1:2,0:14:25.33:102,25,0	1/1:2,0:8:9.86:34,10,0	1/1:3,13:17:26.49:389,26,0	1/1:8,5:13:10.16:146,10,0	1/1:2,11:15:23.57:342,24,0	0/0:24,0:25:74.92:0,75,806	0/0:10,0:11:32.83:0,33,346	1/1:3,0:29:64.75:222,65,0	1/1:3,25:28:66.23:1048,66,0	1/1:6,0:13:13.72:88,14,0	0/1:1,0:10:10.60:46,0,11	0/0:32,0:33:70.15:0,70,777	1/1:0,6:6:18.06:282,18,0	1/1:1,7:8:12.04:191,12,0	1/1:8,15:29:55:730,55,0	0/0:15,0:15:36.08:0,36,401	1/1:19,0:20:38.87:361,39,0	1/1:3,0:21:9.49:104,9,0	1/1:3,0:9:3:29,3,0
chr10	87764273	.	C	CGG	846.91	PASS	AB=0.967;AC=10;AF=0.179;AN=56;BaseQRankSum=-1.418;DP=461;FS=9.063;HRun=2;HaplotypeScore=75.5204;InbreedingCoeff=0.6889;MQ=60.64;MQ0=5;MQRankSum=1.216;QD=12.10;ReadPosRankSum=-1.681;VQSLOD=-0.5189;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:66.16:0,66,850	1/1:1,0:1:3.01:50,3,0	0/0:14,0:6:9.03:0,9,128	0/1:13,0:8:0.34:0,0,85	0/0:23,0:23:51.03:0,51,616	0/0:20,0:20:45.10:0,45,630	0/0:22,0:21:54.15:0,54,728	0/0:24,0:24:41.58:0,42,583	0/0:13,0:13:27.04:0,27,361	1/1:1,14:15:39.11:641,39,0	1/1:10,0:10:15.05:191,15,0	0/0:18,0:19:35.68:0,36,482	0/0:13,0:13:34.36:0,34,480	0/0:13,0:13:33.10:0,33,448	0/0:15,0:15:33.09:0,33,433	0/0:21,0:21:53.78:0,54,672	1/1:17,0:17:3.01:48,3,0	0/0:15,0:15:36.03:0,36,457	0/0:17,0:17:42.14:0,42,577	0/0:19,0:19:45.13:0,45,592	0/0:14,0:14:30.10:0,30,416	0/0:16,0:16:36.12:0,36,504	0/0:12,0:12:30.08:0,30,399	0/0:20,0:19:51.12:0,51,678	0/0:12,0:12:24.07:0,24,316	0/1:13,1:14:61.61:62,0,408	0/0:19,0:19:51.17:0,51,697	0/0:19,0:17:42.14:0,42,556
chr10	87764699	.	ATG	A	214.80	PASS	AB=0.943;AC=21;AF=0.420;AN=50;BaseQRankSum=2.227;DP=482;FS=1.123;HRun=0;HaplotypeScore=68.5665;InbreedingCoeff=0.0133;MQ=61.84;MQ0=20;MQRankSum=0.392;QD=0.82;ReadPosRankSum=1.269;VQSLOD=1.5599;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:31:5.93:28,6,0	1/1:2,0:4:2.84:14,3,0	./.	./.	0/0:9,0:9:3.01:0,3,44	0/1:20,1:21:38.92:39,0,116	0/1:24,1:25:20.11:20,0,111	0/0:33,0:32:3.01:0,3,36	0/1:12,1:13:23.12:23,0,73	./.	1/1:7,0:9:5.68:28,6,0	0/1:13,2:14:21.31:21,0,80	0/0:8,0:8:3.01:0,3,44	0/0:12,0:12:6.02:0,6,87	1/1:16,0:15:5.91:42,6,0	0/1:9,0:9:19.62:20,0,38	1/1:21,0:29:11.12:52,11,0	0/0:21,0:22:9.95:0,10,275	0/0:23,0:22:9.03:0,9,118	0/0:14,0:13:8.70:0,9,100	0/1:26,0:25:11.34:11,0,120	0/0:7,3:10:15.05:0,15,217	1/1:6,0:5:2.99:23,3,0	0/1:18,3:19:14.10:14,0,184	0/1:13,2:13:20.12:20,0,107	0/0:21,0:20:18:0,18,189	0/1:19,0:19:12.86:13,0,82	0/0:7,0:9:3:0,3,26
chr10	87764835	.	GT	G	2562.08	PASS	AB=0.857;AC=40;AF=0.714;AN=56;BaseQRankSum=6.819;DP=446;FS=0.000;HRun=13;HaplotypeScore=52.2901;InbreedingCoeff=0.4690;MQ=55.07;MQ0=19;MQRankSum=-0.036;QD=7.16;ReadPosRankSum=4.217;VQSLOD=1.9214;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,26:30:65.59:481,66,0	1/1:3,5:8:17.59:120,18,0	0/1:41,1:13:16.72:17,0,22	0/0:23,0:7:6.85:0,7,42	0/0:15,1:18:1.10:0,1,183	1/1:1,0:8:12.22:35,12,0	1/1:3,0:11:10.18:29,10,0	0/1:21,2:17:10.65:11,0,216	0/1:7,0:6:9.74:10,0,65	1/1:3,6:11:21.93:140,22,0	1/1:4,8:13:21.72:142,22,0	1/1:5,0:12:15.42:45,15,0	1/1:0,0:5:10.19:29,10,0	1/1:4,0:8:4.05:12,4,0	0/0:16,0:16:36:0,36,336	0/0:9,0:9:20.94:0,21,187	1/1:9,28:38:24.23:495,24,0	1/1:5,0:24:34.61:100,35,0	1/1:13,12:22:35.66:256,36,0	1/1:5,10:15:0.62:168,1,0	0/0:11,0:9:18:0,18,163	1/1:1,0:2:2.03:6,2,0	1/1:1,0:8:10.18:29,10,0	1/1:0,0:12:18.33:53,18,0	0/0:10,1:11:6.01:0,6,210	1/1:5,9:15:2.66:173,3,0	0/1:3,12:16:12.05:168,0,12	1/1:2,12:14:29.66:218,30,0
chr10	87765586	.	CTG	C	2645.28	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.383;DP=782;FS=2.135;HRun=0;HaplotypeScore=93.4780;InbreedingCoeff=0.9994;MQ=91.77;MQ0=2;MQRankSum=0.531;QD=31.12;ReadPosRankSum=-0.061;VQSLOD=5.3778;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1849	1/1:2,10:12:30.10:420,30,0	0/0:33,0:33:86.90:0,87,1341	0/0:33,0:33:77.33:0,77,1300	0/0:18,0:18:51.14:0,51,857	0/0:18,0:18:51.16:0,51,880	0/0:31,0:31:90.28:0,90,1537	0/0:37,0:37:99:0,105,1855	0/0:36,0:36:96.32:0,96,1678	1/1:0,21:21:60.17:792,60,0	1/1:0,16:16:33.11:461,33,0	0/0:34,0:34:99:0,102,1823	0/0:31,0:31:90.29:0,90,1587	0/0:38,0:38:99:0,108,1824	0/0:36,0:36:99:0,102,1775	0/0:44,0:44:99:0,129,2215	1/1:2,33:34:81.27:1133,81,0	0/0:18,0:18:54.13:0,54,891	0/0:15,0:15:45.14:0,45,750	0/0:17,0:17:48.13:0,48,803	0/0:78,0:78:99:0,226,3916	0/0:15,0:15:39.13:0,39,701	0/0:16,0:16:36.12:0,36,641	0/0:33,0:33:96.33:0,96,1716	0/0:10,0:10:27.09:0,27,486	0/0:23,0:23:63.19:0,63,1051	0/0:31,0:31:90.25:0,90,1555	0/0:14,0:14:39.13:0,39,701
chr10	87765774	.	ATCC	A	7630.54	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.388;DP=648;FS=1.948;HRun=0;HaplotypeScore=98.1337;InbreedingCoeff=0.9979;MQ=84.98;MQ0=0;MQRankSum=-3.697;QD=35.99;ReadPosRankSum=6.417;VQSLOD=4.8954;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,2497	0/0:9,0:9:27.09:0,27,596	0/0:22,0:22:66.22:0,66,1310	0/0:24,0:23:57.02:0,57,1066	0/0:12,0:12:36.12:0,36,775	1/1:0,20:20:39.09:598,39,0	1/1:3,29:32:78.27:1252,78,0	0/0:22,0:22:51.17:0,51,1086	0/0:20,0:20:60.21:0,60,1266	0/0:11,0:11:30.10:0,30,631	0/0:10,0:10:27.09:0,27,582	1/1:2,32:34:78.27:1253,78,0	1/1:1,29:30:75.26:1204,75,0	1/1:5,26:31:78.27:1253,78,0	0/0:26,0:26:72.25:0,72,1567	0/0:33,0:33:93.32:0,93,2009	0/0:32,0:32:90.31:0,90,1969	1/1:0,18:18:48.16:771,48,0	0/0:22,0:22:54.19:0,54,1168	0/0:14,0:14:39.12:0,39,796	0/0:65,0:65:99:0,181,3863	1/1:2,13:15:18.01:289,18,0	1/1:0,12:12:24.08:386,24,0	1/1:3,17:20:39.13:627,39,0	0/0:16,0:15:45.14:0,45,952	0/0:21,0:21:54.19:0,54,1149	0/0:21,0:21:57.20:0,57,1239	0/0:13,0:13:36.12:0,36,794
chr10	87767252	.	TC	T	1405.81	PASS	AB=0.886;AC=17;AF=0.304;AN=56;BaseQRankSum=0.075;DP=394;FS=1.100;HRun=11;HaplotypeScore=59.1750;InbreedingCoeff=0.4213;MQ=75.03;MQ0=1;MQRankSum=0.244;QD=7.99;ReadPosRankSum=1.003;VQSLOD=2.0606;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,18:33:70.70:534,71,0	0/0:3,0:3:2.94:0,3,18	0/0:16,0:16:13.32:0,13,165	0/0:9,0:6:2.12:0,2,44	0/1:15,2:17:18.36:18,0,110	0/1:13,1:14:5.65:6,0,129	0/0:10,0:10:3.21:0,3,203	0/1:19,0:19:31.70:32,0,74	0/0:18,0:18:33.06:0,33,343	0/0:8,0:9:2.78:0,3,14	0/0:7,0:7:3.01:0,3,31	0/1:14,3:17:9.62:10,0,97	0/0:14,0:14:29.99:0,30,277	0/0:13,0:13:27.02:0,27,269	0/0:14,0:14:24.04:0,24,242	0/0:19,0:19:36.06:0,36,368	0/0:24,0:26:36.42:0,36,229	0/0:14,2:16:8.44:0,8,287	1/1:5,9:15:31.68:233,32,0	1/1:5,6:12:14.01:105,14,0	0/1:6,3:9:15.63:16,0,47	0/0:10,0:9:9.02:0,9,94	0/0:12,0:12:9.02:0,9,95	0/0:11,0:11:21.02:0,21,212	0/0:7,0:10:2.84:0,3,14	1/1:4,10:14:26.83:208,27,0	1/1:4,17:21:44.94:369,45,0	1/1:3,2:5:8.03:55,8,0
chr10	87767520	.	C	CT	679.53	PASS	AB=0.849;AC=11;AF=0.196;AN=56;BaseQRankSum=8.112;DP=528;FS=33.806;HRun=0;HaplotypeScore=72.0043;InbreedingCoeff=0.6855;MQ=74.61;MQ0=0;MQRankSum=-4.120;QD=7.90;ReadPosRankSum=-7.745;VQSLOD=0.6321;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:5,24:29:0.07:0,0,0	0/1:3,0:3:0.96:1,0,14	0/0:22,0:22:56.85:0,57,699	0/0:12,0:12:24.93:0,25,310	0/0:14,0:14:30:0,30,357	0/0:22,0:22:63.17:0,63,853	0/0:36,0:36:99:0,108,1358	0/0:10,0:10:21.03:0,21,268	0/0:19,0:19:54.18:0,54,750	0/0:7,0:7:5.98:0,6,49	1/1:4,0:4:0.47:1,0,0	0/0:30,0:30:87.23:0,87,1161	0/0:20,0:20:60.15:0,60,795	0/0:43,0:43:99:0,123,1685	0/0:16,0:16:42.12:0,42,553	0/0:19,0:19:57.06:0,57,727	0/0:14,0:14:5.15:0,5,54	0/0:26,0:26:78.17:0,78,1041	1/1:15,0:15:32.77:295,33,0	1/1:11,0:11:11.87:83,12,0	0/0:56,0:56:99:0,165,2119	0/0:9,0:9:24.04:0,24,312	0/0:10,0:10:20.98:0,21,248	0/0:39,0:39:99:0,114,1477	0/0:17,0:17:51.09:0,51,649	0/1:7,0:7:3.71:112,0,4	1/1:17,0:17:41.82:330,42,0	0/0:1,0:1:2.22:0,2,7
chr10	87768005	.	TTG	T	946.62	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=5.451;DP=498;FS=7.172;HRun=0;HaplotypeScore=60.9715;InbreedingCoeff=0.1029;MQ=79.06;MQ0=4;MQRankSum=-0.064;QD=2.76;ReadPosRankSum=5.163;VQSLOD=0.1512;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:14.12:0,14,469	1/1:10,1:12:26.73:263,27,0	0/1:45,0:15:0:0,0,111	0/1:38,0:21:43.11:43,0,55	0/0:17,0:17:25.64:0,26,301	0/1:14,0:14:3.33:3,0,89	0/1:26,0:26:10.32:10,0,110	0/0:18,0:18:26.34:0,26,276	0/0:15,0:15:4.59:0,5,328	1/1:2,13:15:20.68:144,21,0	1/1:3,0:13:11.78:100,12,0	0/1:9,0:9:12.03:12,0,65	0/1:12,0:12:10.47:50,0,10	0/1:12,0:12:12.63:13,0,44	0/0:24,0:24:32.38:0,32,469	0/0:18,0:18:51.46:0,51,483	1/1:2,28:30:14.26:174,14,0	1/1:20,0:20:17.13:103,17,0	0/1:14,0:14:9.33:9,0,263	0/0:13,0:13:8.64:0,9,195	0/1:11,0:11:31.13:31,0,133	0/0:10,0:10:0.94:0,1,1	0/1:11,0:11:10.02:53,0,10	1/1:26,0:26:6.11:53,6,0	0/1:14,0:14:2.73:3,0,236	0/1:11,0:11:25.22:28,0,25	0/0:13,0:13:23.64:0,24,317	0/1:10,0:10:15.12:31,0,15
chr10	87768204	.	T	TTCCGTC	9325.01	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-3.821;DP=646;FS=14.346;HRun=0;HaplotypeScore=133.9590;InbreedingCoeff=0.9594;MQ=76.55;MQ0=0;MQRankSum=-12.709;QD=50.96;ReadPosRankSum=-1.420;VQSLOD=4.0758;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,20:31:57.20:1802,57,0	1/1:1,6:8:15.05:509,15,0	0/0:18,0:18:42.11:0,42,840	0/0:22,0:22:48.16:0,48,1026	0/0:14,0:14:30.10:0,30,664	0/0:16,0:16:42.14:0,42,932	0/0:27,0:27:75.26:0,75,1616	0/0:31,0:31:78.22:0,78,1681	0/0:28,0:28:84.29:0,84,1813	1/1:16,12:28:36.12:1194,36,0	1/1:6,2:8:6.02:204,6,0	0/0:30,0:30:78.27:0,78,1697	0/0:18,0:18:51.15:0,51,1062	0/0:30,0:30:84.27:0,84,1804	0/0:35,0:35:96.32:0,96,2081	0/0:20,0:20:39.13:0,39,864	1/1:12,10:23:18.06:596,18,0	0/0:30,0:30:72.18:0,72,1500	1/1:18,8:27:48.10:1396,48,0	1/1:4,4:9:12.04:408,12,0	0/0:64,0:64:99:0,178,3820	0/0:9,0:9:21.07:0,21,449	0/0:13,0:13:33.09:0,33,621	0/0:39,0:39:93.32:0,93,2059	0/0:19,0:19:51.18:0,51,1130	1/1:8,16:25:54.17:1677,54,0	1/1:8,14:21:45.15:1490,45,0	1/1:2,0:2:5.99:48,6,0
chr10	87769223	.	AAAAAG	A	6047.10	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=8.990;DP=501;FS=10.436;HRun=0;HaplotypeScore=105.2754;InbreedingCoeff=0.9852;MQ=75.95;MQ0=0;MQRankSum=-2.704;QD=46.52;ReadPosRankSum=4.397;VQSLOD=4.6997;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.23:0,72,2055	0/0:8,0:8:18.06:0,18,512	0/0:13,0:12:27.39:0,27,512	0/0:18,0:16:13.10:0,13,440	0/0:21,0:20:60.21:0,60,1783	1/1:0,12:12:30.10:600,30,0	1/1:2,6:8:18.06:359,18,0	0/0:39,0:39:99:0,108,3149	0/0:12,0:12:36.12:0,36,1074	0/0:12,0:12:27.09:0,27,807	0/0:23,0:23:63.22:0,63,1793	1/1:1,8:9:12.04:240,12,0	1/1:0,10:10:30.10:599,30,0	1/1:2,14:16:36.12:717,36,0	0/0:21,0:21:63.22:0,63,1872	0/0:12,0:12:36.11:0,36,1011	0/0:39,0:39:99:0,114,3296	1/1:2,20:22:57.20:1139,57,0	0/0:20,0:20:51.18:0,51,1460	0/0:26,0:26:72.25:0,72,2148	0/0:8,0:8:21.07:0,21,626	1/1:6,15:21:39.13:774,39,0	1/1:0,24:24:63.22:1259,63,0	1/1:1,7:8:18.53:361,19,0	0/0:28,0:28:81.28:0,81,2403	0/0:21,0:21:60.21:0,60,1792	0/0:13,0:13:33.11:0,33,961	0/0:7,0:7:17.84:0,18,512
chr10	87769260	.	C	CT	2455.03	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-7.586;DP=463;FS=2.231;HRun=7;HaplotypeScore=68.3594;InbreedingCoeff=0.8602;MQ=61.23;MQ0=8;MQRankSum=1.880;QD=20.81;ReadPosRankSum=1.232;VQSLOD=3.2825;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,21:25:40.18:643,40,0	0/0:4,0:4:11.99:0,12,108	0/0:6,0:4:5.34:0,5,28	0/1:10,0:8:19.86:20,0,50	0/0:21,0:21:48.07:0,48,463	0/0:12,0:12:30.05:0,30,289	0/0:4,0:4:12.02:0,12,114	0/0:39,0:38:90.12:0,90,859	0/0:9,0:9:27.04:0,27,261	0/0:14,0:13:30.04:0,30,290	0/0:17,0:17:45.06:0,45,429	0/0:11,0:11:24.03:0,24,228	0/0:13,0:13:30.04:0,30,290	0/0:14,0:14:30.03:0,30,284	0/0:17,0:17:39.01:0,39,367	0/0:11,0:11:33.03:0,33,307	0/0:35,0:35:81.10:0,81,775	0/0:23,0:23:54.02:0,54,510	1/1:7,18:23:54.12:633,54,0	1/1:7,17:22:42.09:486,42,0	0/0:12,0:12:33.05:0,33,317	0/0:17,0:17:39.06:0,39,376	0/0:26,0:26:51.06:0,51,490	0/0:16,0:16:32.84:0,33,318	0/0:24,0:24:63.08:0,63,603	1/1:6,12:17:16.12:462,16,0	1/1:2,7:8:15.05:181,15,0	1/1:0,6:6:18.06:217,18,0
chr10	87769986	.	CG	C	920.28	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.346;DP=663;FS=0.000;HRun=1;HaplotypeScore=63.4332;InbreedingCoeff=0.9983;MQ=79.62;MQ0=0;MQRankSum=-2.670;QD=35.40;ReadPosRankSum=0.743;VQSLOD=3.6044;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:99:0,144,2240	0/0:10,0:10:30.10:0,30,479	0/0:17,0:17:41.87:0,42,598	0/0:15,0:15:33.48:0,33,617	0/0:19,0:18:57.17:0,57,883	0/0:20,0:20:60.19:0,60,934	0/0:28,0:28:84.25:0,84,1292	0/0:25,0:25:72.20:0,72,1122	0/0:25,0:25:75.26:0,75,1196	0/0:31,0:31:93.30:0,93,1444	0/0:13,0:13:36.12:0,36,571	0/0:24,0:24:72.24:0,72,1131	0/0:25,0:25:75.26:0,75,1191	0/0:31,0:31:93.32:0,93,1485	0/0:28,0:28:84.24:0,84,1287	0/0:31,0:31:93.32:0,93,1481	0/0:24,0:24:72.23:0,72,1118	0/0:32,0:32:96.33:0,96,1532	0/0:21,0:21:63.19:0,63,963	0/0:19,0:19:57.19:0,57,909	0/0:33,0:33:96.27:0,96,1459	0/0:25,0:25:75.26:0,75,1198	0/0:21,0:21:63.20:0,63,983	0/0:27,0:27:81.28:0,81,1294	0/0:11,0:11:33.10:0,33,502	1/1:0,18:18:51.17:706,51,0	0/0:32,0:31:96.31:0,96,1500	1/1:0,8:8:24.08:336,24,0
chr10	87770186	.	CA	C	7375.58	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.036;DP=665;FS=1.699;HRun=5;HaplotypeScore=67.8334;InbreedingCoeff=0.9962;MQ=84.65;MQ0=0;MQRankSum=-2.408;QD=31.25;ReadPosRankSum=-0.429;VQSLOD=5.2555;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:72.20:817,72,0	1/1:2,9:11:27.08:306,27,0	0/0:28,0:28:72.21:0,72,913	0/0:15,0:15:36.03:0,36,431	0/0:31,0:31:75.19:0,75,1005	0/0:24,0:24:66.22:0,66,902	0/0:26,0:26:78.26:0,78,1066	0/0:25,0:25:69.22:0,69,931	0/0:18,0:18:51.17:0,51,697	1/1:0,39:39:99:1300,117,0	1/1:1,22:23:57.16:647,57,0	0/0:24,0:24:72.24:0,72,984	0/0:20,0:20:57.17:0,57,762	0/0:22,0:22:63.21:0,63,862	0/0:28,0:28:81.25:0,81,1091	0/0:29,0:29:84.28:0,84,1149	1/1:0,26:26:75.21:849,75,0	0/0:26,2:28:13.16:0,13,924	1/1:1,24:24:69.15:755,69,0	1/1:0,26:26:69.19:782,69,0	0/0:14,0:14:42.14:0,42,575	0/0:24,0:24:72.24:0,72,984	0/0:26,0:26:75.19:0,75,975	0/0:26,0:26:78.26:0,78,1067	0/0:21,0:21:60.20:0,60,819	1/1:1,24:25:72.17:797,72,0	1/1:0,17:17:51.15:578,51,0	1/1:0,17:17:48.14:544,48,0
chr10	87772495	.	CTAGGTTTCTAAGT	C	9313.47	PASS	AB=0.571;AC=11;AF=0.196;AN=56;BaseQRankSum=13.735;DP=586;FS=0.449;HRun=0;HaplotypeScore=219.2097;InbreedingCoeff=0.8849;MQ=84.59;MQ0=0;MQRankSum=-12.022;QD=78.93;ReadPosRankSum=1.807;VQSLOD=4.6934;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:22:51.18:1996,51,0	0/0:13,0:13:36.12:0,36,2180	0/0:19,0:19:48.16:0,48,2380	0/0:21,0:21:54.19:0,54,3072	0/0:20,0:20:60.20:0,60,3788	0/0:22,0:22:66.21:0,66,3683	0/0:22,0:22:66.23:0,66,3737	0/0:33,0:33:93.32:0,93,5718	0/0:15,0:15:45.15:0,45,2737	0/0:19,0:19:57.20:0,57,3579	0/0:21,0:21:54.19:0,54,3280	0/0:21,0:21:62.70:0,63,3424	0/0:22,0:22:66.21:0,66,3608	0/0:17,0:17:45.15:0,45,2500	0/0:21,0:21:60.18:0,60,3176	0/0:14,0:14:39.13:0,39,2545	0/0:33,0:32:93.32:0,93,5645	0/0:24,0:24:72.25:0,72,4358	1/1:5,17:22:45.14:1629,45,0	1/1:2,16:18:39.13:1513,39,0	0/0:34,0:34:99:0,99,5936	0/0:13,0:13:39.13:0,39,2373	0/0:16,0:16:36:0,36,2068	0/0:28,0:28:84.25:0,84,5012	0/0:20,0:20:57.20:0,57,3589	0/1:6,18:24:99:1887,0,142	1/1:3,17:20:39.13:1563,39,0	1/1:5,7:12:18.06:726,18,0
chr10	87773860	.	TTTTC	T	1669.89	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.948;DP=673;FS=5.265;HRun=0;HaplotypeScore=144.7330;InbreedingCoeff=0.9569;MQ=65.05;MQ0=5;MQRankSum=-2.402;QD=33.40;ReadPosRankSum=0.326;VQSLOD=3.6951;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:81.21:0,81,1323	0/0:4,0:4:12.04:0,12,203	0/0:25,0:13:19.82:0,20,353	0/0:18,0:10:10.20:0,10,355	0/0:20,0:20:51.15:0,51,1162	0/0:20,0:20:54.18:0,54,1272	0/0:30,0:30:84.27:0,84,1960	0/0:36,0:36:96.17:0,96,1996	0/0:30,0:30:75.24:0,75,1666	0/0:34,0:34:87.29:0,87,1468	0/0:10,0:10:24.08:0,24,444	0/0:20,0:20:48.13:0,48,1078	0/0:30,0:30:81.23:0,81,1804	0/0:14,0:14:36.10:0,36,808	0/0:23,0:23:66.15:0,66,1385	0/0:30,0:30:81.23:0,81,1769	0/0:34,0:34:87.20:0,87,1438	0/0:29,0:29:81.20:0,81,1867	0/0:22,0:22:42.06:0,42,622	0/0:14,0:14:30.06:0,30,461	0/0:21,0:21:48.15:0,48,1085	0/0:16,0:16:48.14:0,48,1037	0/0:16,0:16:45.05:0,45,997	0/0:38,0:38:99:0,99,2126	0/0:16,0:16:39.09:0,39,787	1/1:4,29:32:37.55:1365,38,0	0/0:37,0:37:81.10:0,81,1375	1/1:0,17:17:24.08:426,24,0
chr10	87773884	.	CT	C	2733.05	PASS	AB=0.875;AC=16;AF=0.286;AN=56;BaseQRankSum=12.589;DP=580;FS=4.485;HRun=7;HaplotypeScore=93.4468;InbreedingCoeff=0.8138;MQ=60.10;MQ0=11;MQRankSum=-2.188;QD=15.80;ReadPosRankSum=2.367;VQSLOD=3.6554;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:54.12:550,54,0	1/1:0,2:2:6.01:61,6,0	0/0:32,0:11:22.25:0,22,236	0/1:26,2:13:12.40:12,0,119	0/0:19,1:20:17.53:0,18,520	0/0:19,0:19:48.12:0,48,582	0/0:24,0:24:59.97:0,60,737	0/0:29,0:29:60.18:0,60,744	0/0:24,0:24:63.20:0,63,791	1/1:10,17:27:48.10:489,48,0	1/1:0,9:9:18.04:183,18,0	0/0:18,0:18:51.16:0,51,641	0/0:24,0:24:66.12:0,66,780	0/0:16,0:16:39.08:0,39,450	0/0:21,0:20:54.17:0,54,679	0/0:25,0:25:69.21:0,69,854	1/1:4,31:33:81.18:824,81,0	0/0:34,0:34:93.28:0,93,1150	0/1:10,3:11:8.65:79,0,9	1/1:0,7:7:18.04:182,18,0	0/0:16,0:16:48.14:0,48,590	0/0:19,0:19:51.15:0,51,629	0/0:12,0:12:30.10:0,30,375	0/0:30,0:30:87.28:0,87,1093	0/0:9,0:9:21.05:0,21,249	0/0:28,1:29:35.52:0,36,735	1/1:1,24:25:53.75:550,54,0	0/0:6,0:6:15.05:0,15,189
chr10	87774112	.	T	TG	906.63	PASS	AC=34;AF=0.944;AN=36;BaseQRankSum=-2.168;DP=86;FS=12.430;HRun=4;HaplotypeScore=19.1127;InbreedingCoeff=0.1478;MQ=65.40;MQ0=0;MQRankSum=-2.381;QD=14.17;ReadPosRankSum=-0.604;VQSLOD=0.9084;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,2:4:3.01:41,3,0	./.	./.	0/0:4,0:4:5.93:0,6,41	./.	./.	1/1:4,0:4:3.01:30,3,0	1/1:4,0:4:11.89:86,12,0	1/1:6,0:6:8.98:76,9,0	1/1:2,4:6:12.04:158,12,0	1/1:0,1:1:3.01:41,3,0	1/1:5,0:5:5.99:53,6,0	1/1:6,0:6:5.95:53,6,0	1/1:5,0:5:9.02:101,9,0	1/1:4,0:4:5.99:53,6,0	1/1:3,0:3:5.99:51,6,0	1/1:4,1:5:6.02:82,6,0	1/1:3,0:3:6.01:57,6,0	1/1:0,1:1:3.01:41,3,0	./.	./.	./.	1/1:3,0:3:3.01:30,3,0	1/1:2,0:2:2.99:23,3,0	1/1:2,0:2:2.99:23,3,0	./.	./.	./.
chr10	87774114	.	G	GT	1210.14	PASS	AB=1.000;AC=32;AF=0.842;AN=38;BaseQRankSum=0.203;DP=71;FS=8.346;HRun=0;HaplotypeScore=16.6906;InbreedingCoeff=0.1546;MQ=66.89;MQ0=0;MQRankSum=-0.830;QD=21.61;ReadPosRankSum=1.973;VQSLOD=4.1299;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:2,0:2:13.96:15,0,14	0/0:2,0:2:3:0,3,25	./.	0/0:2,0:3:5.64:0,6,55	./.	./.	1/1:0,3:3:3.01:48,3,0	1/1:0,4:4:12.04:190,12,0	1/1:0,5:5:9.03:143,9,0	1/1:5,0:5:11.73:72,12,0	1/1:1,0:1:2.98:21,3,0	1/1:0,4:4:6.02:96,6,0	1/1:3,3:6:11.98:139,12,0	1/1:0,4:4:9.03:139,9,0	1/1:0,4:4:6.02:96,6,0	1/1:0,3:3:6.02:94,6,0	0/1:5,0:5:24.01:24,0,29	1/1:0,2:2:6.02:95,6,0	1/1:1,0:1:2.84:14,3,0	./.	./.	./.	1/1:0,3:3:3.01:48,3,0	1/1:0,2:2:3.01:48,3,0	1/1:0,2:2:3.01:41,3,0	./.	./.	./.
chr10	87774402	.	AAC	A	1513.65	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=9.100;DP=294;FS=65.894;HRun=0;HaplotypeScore=74.4901;InbreedingCoeff=0.8379;MQ=74.76;MQ0=9;MQRankSum=-7.279;QD=20.45;ReadPosRankSum=-1.252;VQSLOD=1.1433;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,5:6:9.03:108,9,0	1/1:0,4:4:12.04:145,12,0	0/1:16,0:10:5.88:6,0,313	0/0:31,0:21:45.46:0,45,791	0/0:6,0:6:15.05:0,15,248	0/0:9,0:8:21.06:0,21,294	0/0:14,0:13:16.16:0,16,453	0/0:24,0:24:61.77:0,62,1022	0/0:10,0:10:24.06:0,24,315	1/1:0,7:7:21.07:282,21,0	1/1:0,2:2:2.99:36,3,0	0/0:4,0:4:12.03:0,12,148	0/0:15,0:15:39.10:0,39,549	0/0:7,0:6:12.04:0,12,173	0/0:9,0:9:21.07:0,21,305	0/0:5,0:5:15.05:0,15,243	1/1:0,5:5:15.05:183,15,0	0/0:15,0:15:45.15:0,45,644	1/1:3,5:7:15.50:189,15,0	1/1:0,11:11:30.09:356,30,0	0/0:25,0:24:60.09:0,60,790	0/0:6,0:6:15.05:0,15,230	0/0:5,0:5:15.05:0,15,238	0/0:30,0:30:35.32:0,35,841	0/0:5,0:5:14.54:0,15,209	1/1:0,4:4:12.04:161,12,0	1/1:0,6:6:18.05:212,18,0	1/1:1,4:4:3.01:40,3,0
chr10	87774431	.	CACCACTGTTGTTA	C	5795.84	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.567;DP=430;FS=87.175;HRun=0;HaplotypeScore=177.3599;InbreedingCoeff=0.9456;MQ=97.96;MQ0=1;MQRankSum=-9.307;QD=81.63;ReadPosRankSum=4.377;VQSLOD=0.9716;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,9:15:24.08:934,24,0	1/1:1,3:4:9.03:350,9,0	0/0:25,0:25:66.23:0,66,3509	0/0:37,0:36:78.27:0,78,4164	0/0:9,0:9:27.09:0,27,1754	0/0:13,0:13:39.13:0,39,2454	0/0:23,0:23:69.24:0,69,3946	0/0:37,0:36:96.32:0,96,5323	0/0:14,0:14:42.14:0,42,2656	1/1:1,9:10:27.09:1051,27,0	1/1:1,2:3:2.80:117,3,0	0/0:13,0:13:39.13:0,39,2443	0/0:16,0:16:48.16:0,48,2826	0/0:12,0:12:36.12:0,36,2298	0/0:16,0:16:48.16:0,48,3116	0/0:11,0:11:33.11:0,33,2121	1/1:2,7:9:18.06:700,18,0	0/0:18,0:18:51.13:0,51,2936	1/1:5,4:9:12.04:309,12,0	1/1:1,12:13:36.12:1401,36,0	0/0:31,0:31:82.48:0,82,4586	0/0:10,0:10:27.09:0,27,1685	0/0:10,0:10:30.10:0,30,1863	0/0:39,0:39:99:0,108,5907	0/0:9,0:9:24.08:0,24,1558	0/0:9,0:9:27.09:0,27,1697	1/1:0,8:8:24.08:934,24,0	0/0:7,0:7:12.04:0,12,778
chr10	87774579	.	TCA	T	5830.62	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.579;DP=625;FS=3.743;HRun=0;HaplotypeScore=82.6454;InbreedingCoeff=0.9941;MQ=68.64;MQ0=2;MQRankSum=-4.364;QD=35.99;ReadPosRankSum=0.199;VQSLOD=7.0724;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,39:41:96.32:1409,96,0	1/1:0,6:6:15.05:221,15,0	0/0:19,0:18:49.90:0,50,773	0/0:28,0:26:29.52:0,30,571	0/0:20,0:20:51.14:0,51,885	0/0:14,0:13:36.11:0,36,641	0/0:26,0:26:75.21:0,75,1301	0/0:22,0:22:57.16:0,57,949	0/0:23,0:23:69.22:0,69,1249	1/1:2,17:19:48.16:706,48,0	1/1:1,13:14:24.08:337,24,0	0/0:28,0:28:81.24:0,81,1435	0/0:22,0:22:63.22:0,63,1160	0/0:33,0:33:93.27:0,93,1644	0/0:27,0:27:78.27:0,78,1458	0/0:23,0:23:66.23:0,66,1228	1/1:1,35:36:90.30:1323,90,0	0/0:20,0:20:60.14:0,60,1052	1/1:0,12:12:36.12:512,36,0	1/1:0,6:6:18.06:264,18,0	0/0:59,0:59:99:0,172,3128	0/0:12,0:12:33.09:0,33,584	0/0:6,0:6:18.06:0,18,336	0/0:37,0:37:99:0,108,1988	0/0:12,0:12:36.12:0,36,674	0/0:18,0:18:48.16:0,48,899	1/1:0,28:26:72.24:1058,72,0	0/0:14,0:14:39.13:0,39,730
chr10	87774927	.	C	CGT	5539.09	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=9.604;DP=474;FS=0.878;HRun=0;HaplotypeScore=74.2806;InbreedingCoeff=0.9378;MQ=65.11;MQ0=1;MQRankSum=-0.911;QD=30.60;ReadPosRankSum=2.257;VQSLOD=6.1146;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,26:33:51.17:843,51,0	1/1:1,13:14:2.51:306,3,0	0/0:10,0:8:15.82:0,16,122	0/0:6,0:5:9.01:0,9,96	0/0:21,0:21:51.17:0,51,678	0/0:19,0:19:42.14:0,42,556	0/0:11,0:11:33.07:0,33,407	0/0:30,0:30:78.20:0,78,988	0/0:11,0:11:30.10:0,30,398	1/1:6,19:27:52.19:977,52,0	1/1:2,12:15:27.09:425,27,0	0/0:13,0:13:36.12:0,36,479	0/0:15,0:15:45.15:0,45,598	0/0:8,0:8:21.06:0,21,264	0/0:16,0:16:45.13:0,45,582	0/0:10,0:10:30.10:0,30,399	1/1:5,25:30:9.60:977,10,0	0/0:23,0:23:61.75:0,62,801	1/1:6,21:27:12.74:804,13,0	1/1:4,10:14:20.22:390,20,0	0/0:12,0:12:36.12:0,36,475	0/0:8,0:8:24.08:0,24,319	0/0:18,0:18:51.17:0,51,678	0/0:5,0:5:15.05:0,15,200	0/0:21,0:21:57.15:0,57,732	0/0:22,0:22:52.75:0,53,333	1/1:6,15:21:54.13:819,54,0	0/0:14,0:14:38.73:0,39,277
chr10	87775769	.	T	TA	7598.31	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-14.702;DP=699;FS=1.011;HRun=4;HaplotypeScore=65.1333;InbreedingCoeff=0.9993;MQ=83.66;MQ0=0;MQRankSum=-2.091;QD=33.04;ReadPosRankSum=1.564;VQSLOD=5.4848;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,36:40:87.29:1190,87,0	1/1:2,8:10:21.03:266,21,0	0/0:29,0:29:72.19:0,72,803	0/0:22,0:22:42.26:0,42,527	0/0:22,0:22:60.17:0,60,680	0/0:22,0:22:60.15:0,60,669	0/0:23,0:23:54.15:0,54,610	0/0:30,0:30:81.23:0,81,919	0/0:26,0:26:72.20:0,72,816	1/1:2,19:22:60.19:804,60,0	1/1:3,28:31:78.22:1045,78,0	0/0:24,0:24:66.19:0,66,749	0/0:18,0:18:51.15:0,51,578	0/0:26,0:26:72.19:0,72,807	0/0:25,0:25:63.18:0,63,714	0/0:32,0:32:84.24:0,84,952	1/1:3,35:38:90.30:1231,90,0	0/0:23,0:23:60.14:0,60,667	1/1:2,30:32:87.24:1153,87,0	1/1:3,17:20:45.15:611,45,0	0/0:19,0:19:51.15:0,51,579	0/0:17,0:17:48.14:0,48,545	0/0:17,0:17:45.13:0,45,511	0/0:23,0:23:63.16:0,63,704	0/0:20,0:20:54.15:0,54,612	0/0:33,0:33:62.34:0,62,928	1/1:4,33:37:96.31:1297,96,0	0/0:18,0:18:54.15:0,54,611
chr10	87776594	.	GA	G	2601.76	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-3.226;DP=481;FS=3.680;HRun=10;HaplotypeScore=70.1452;InbreedingCoeff=0.9377;MQ=72.66;MQ0=0;MQRankSum=0.645;QD=20.33;ReadPosRankSum=0.205;VQSLOD=4.6264;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:80:0,80,532	0/0:6,0:6:14.74:0,15,91	0/0:11,0:10:15.75:0,16,93	0/0:7,0:7:0.33:0,0,22	0/0:28,0:31:77.70:0,78,797	1/1:0,20:20:53.99:469,54,0	1/1:2,8:10:20.99:182,21,0	0/0:40,0:40:99:0,108,1174	0/0:13,0:13:30.06:0,30,322	0/0:16,0:16:40.75:0,41,234	0/0:25,0:25:65.13:0,65,446	1/1:1,8:9:18:156,18,0	1/1:2,15:17:38.99:339,39,0	1/1:1,14:15:41.99:365,42,0	0/0:19,0:19:51.14:0,51,564	0/0:9,0:9:24.05:0,24,255	0/0:22,0:22:56.25:0,56,373	1/1:1,14:15:41.99:365,42,0	0/0:21,0:21:52.91:0,53,334	0/0:23,1:24:27.35:0,27,307	0/0:4,0:4:9:0,9,83	1/1:0,12:12:32.99:287,33,0	1/1:2,20:22:56.99:495,57,0	1/1:1,7:8:18:156,18,0	0/0:18,0:18:45.12:0,45,498	0/0:13,1:14:10.62:0,11,132	0/0:24,0:24:62.05:0,62,395	0/0:19,0:19:41.02:0,41,230
chr10	87777994	.	TTC	T	1077.93	PASS	AB=0.969;AC=23;AF=0.442;AN=52;BaseQRankSum=1.303;DP=388;FS=1.920;HRun=0;HaplotypeScore=44.2150;InbreedingCoeff=-0.2424;MQ=38.35;MQ0=29;MQRankSum=1.811;QD=3.89;ReadPosRankSum=0.766;VQSLOD=1.6306;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:26,2:19:13.41:162,0,13	1/1:6,1:7:2.22:125,2,0	./.	./.	0/0:16,0:15:35.43:0,35,291	0/1:13,0:11:23.93:24,0,63	0/1:15,0:8:10.05:10,0,31	0/0:23,0:17:44.70:0,45,417	0/0:17,0:17:33.45:0,33,351	0/1:7,7:10:1.55:116,0,2	0/1:15,1:13:27.67:28,0,41	0/1:11,0:8:13.47:13,0,26	0/1:10,0:9:18.75:19,0,21	0/1:11,0:10:37.30:54,0,37	0/0:17,0:15:29.93:0,30,302	0/0:16,0:15:39.46:0,39,444	0/1:27,2:23:28.32:119,0,28	0/1:18,0:17:30.76:31,0,94	1/1:5,2:5:14.90:119,15,0	0/1:8,0:7:25.57:39,0,26	0/1:13,0:10:8.54:9,0,149	0/1:8,0:6:16.84:17,0,25	0/1:8,0:8:1.37:20,0,1	0/1:18,0:13:5.02:42,0,5	0/0:12,0:12:27.91:0,28,248	0/1:13,0:12:48.88:49,0,50	1/1:10,1:10:17.56:135,18,0	0/1:19,0:17:29.55:109,0,30
chr10	87780615	.	C	CG	85.76	PASS	AB=0.545;AC=3;AF=0.058;AN=52;BaseQRankSum=4.701;DP=234;FS=4.600;HRun=0;HaplotypeScore=32.2312;InbreedingCoeff=0.2772;MQ=87.85;MQ0=0;MQRankSum=0.565;QD=6.60;ReadPosRankSum=1.269;VQSLOD=2.8527;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:1,0:1:2.84:0,3,14	0/0:13,0:10:23.87:0,24,306	0/0:15,0:14:21.45:0,21,439	0/0:13,0:13:39.12:0,39,527	0/0:12,0:12:33.11:0,33,452	0/0:6,0:6:18.04:0,18,233	0/0:23,0:23:69.19:0,69,902	0/0:5,0:5:12.04:0,12,168	./.	0/0:4,0:4:3:0,3,26	0/0:13,0:13:39.13:0,39,544	0/0:7,0:7:21.07:0,21,292	0/0:14,0:14:42.11:0,42,546	0/0:7,0:7:21.07:0,21,291	0/0:10,0:10:30.10:0,30,418	0/0:3,0:3:9.03:0,9,112	0/0:11,0:11:33.11:0,33,458	0/0:6,0:6:8.16:0,8,127	0/0:3,0:3:6.02:0,6,83	0/0:15,0:15:39.13:0,39,543	0/0:9,0:9:24.05:0,24,300	0/0:10,0:10:30.10:0,30,416	0/0:8,0:8:24.08:0,24,334	0/0:9,0:9:24.06:0,24,317	0/1:2,10:12:41.30:146,0,41	0/0:4,0:4:5.95:0,6,78	1/1:0,1:1:3.01:30,3,0
chr10	87784221	.	GTT	G	3620.09	PASS	AB=0.941;AC=9;AF=0.161;AN=56;BaseQRankSum=9.244;DP=566;FS=2.707;HRun=2;HaplotypeScore=68.2867;InbreedingCoeff=0.9228;MQ=83.19;MQ0=0;MQRankSum=-2.034;QD=37.71;ReadPosRankSum=2.093;VQSLOD=3.8128;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,2059	1/1:0,8:8:21.07:343,21,0	0/0:16,0:16:48.15:0,48,927	0/0:16,0:16:43.95:0,44,759	0/0:33,0:33:99:0,99,1980	0/0:20,0:20:60.21:0,60,1209	0/0:14,0:14:42.14:0,42,832	0/0:24,0:24:69.22:0,69,1361	0/0:14,0:14:42.14:0,42,853	1/1:0,26:26:78.22:1221,78,0	1/1:0,17:17:48.16:783,48,0	0/0:27,0:27:81.28:0,81,1643	0/0:17,0:17:51.18:0,51,1033	0/0:22,0:22:66.19:0,66,1297	0/0:16,0:16:48.16:0,48,964	0/0:23,0:23:69.24:0,69,1400	1/1:0,29:29:78.27:1273,78,0	0/0:22,0:22:66.23:0,66,1296	0/0:23,0:23:69.24:0,69,1400	0/0:23,0:23:66.21:0,66,1301	0/0:18,0:18:51.16:0,51,999	0/0:14,0:14:42.13:0,42,818	0/0:27,0:27:81.24:0,81,1557	0/0:10,0:10:30.10:0,30,610	0/0:19,0:19:57.18:0,57,1111	0/1:15,1:16:0.80:1,0,864	0/0:30,0:29:90.31:0,90,1823	0/0:8,0:8:24.08:0,24,488
chr10	87785397	.	CAG	C	14624.44	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=17.381;DP=694;FS=1.768;HRun=0;HaplotypeScore=88.4416;InbreedingCoeff=0.9999;MQ=81.07;MQ0=0;MQRankSum=-3.735;QD=32.07;ReadPosRankSum=3.450;VQSLOD=7.1713;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:48.16:631,48,0	1/1:1,10:11:30.10:394,30,0	0/0:18,0:19:45.63:0,46,764	0/0:17,0:17:36.12:0,36,610	0/0:25,0:25:72.25:0,72,1234	1/1:5,20:24:54.18:710,54,0	1/1:3,17:20:45.15:591,45,0	0/0:31,0:31:78.25:0,78,1288	0/0:24,0:24:66.23:0,66,1131	1/1:3,16:19:48.13:613,48,0	1/1:5,17:21:51.17:670,51,0	1/1:5,20:25:57.19:749,57,0	1/1:3,29:32:72.23:946,72,0	1/1:4,23:27:60.20:788,60,0	0/0:40,0:40:99:0,111,1897	0/0:38,0:38:99:0,102,1743	1/1:2,13:15:39.13:512,39,0	1/1:4,15:19:45.15:591,45,0	1/1:6,17:23:51.13:652,51,0	1/1:4,33:37:87.28:1143,87,0	0/0:27,0:27:75.23:0,75,1253	1/1:2,27:29:81.26:1064,81,0	1/1:1,28:29:72.23:946,72,0	1/1:1,23:24:66.21:863,66,0	0/0:17,0:17:45.15:0,45,772	1/1:4,23:27:69.22:907,69,0	1/1:4,36:40:99:1379,105,0	1/1:1,12:13:36.12:473,36,0
chr10	87786062	.	A	AT	6445.22	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.286;DP=723;FS=5.362;HRun=4;HaplotypeScore=98.4330;InbreedingCoeff=0.9961;MQ=77.63;MQ0=0;MQRankSum=-2.760;QD=26.74;ReadPosRankSum=-1.933;VQSLOD=3.0875;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,34:46:99:1122,102,0	1/1:1,8:9:27.06:319,27,0	0/0:16,0:16:13.54:0,14,382	0/0:18,0:18:51.02:0,51,538	0/0:36,0:36:99:0,102,1130	0/0:21,0:21:63.18:0,63,714	0/0:21,0:21:63.10:0,63,697	0/0:28,0:28:66.18:0,66,749	0/0:18,0:18:48.14:0,48,544	1/1:3,19:22:57.15:674,57,0	1/1:5,23:28:50.32:705,50,0	0/0:32,0:32:84.22:0,84,940	0/0:25,0:25:72.19:0,72,807	0/0:17,0:17:51.15:0,51,578	0/0:30,0:30:90.24:0,90,1011	0/0:19,0:19:51.13:0,51,569	1/1:1,25:26:63.20:780,63,0	0/0:19,0:19:54.12:0,54,591	1/1:7,18:25:60.04:656,60,0	1/1:6,35:41:93.05:1073,93,0	0/0:30,0:30:72.18:0,72,805	0/0:25,0:25:63.14:0,63,693	0/0:32,0:32:90.24:0,90,1010	0/0:18,0:18:54.15:0,54,612	0/0:24,0:24:57.15:0,57,638	0/0:24,1:25:32.03:0,32,696	1/1:7,36:44:81.19:1116,81,0	0/0:28,0:28:75.21:0,75,847
chr10	87787015	.	AGCCAGCCTGGTCTACAAAGCAAATTCCAG	A	3570.36	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.819;DP=453;FS=2.796;HRun=0;HaplotypeScore=313.4113;InbreedingCoeff=0.9565;MQ=56.37;MQ0=2;MQRankSum=-4.551;QD=81.14;ReadPosRankSum=0.880;VQSLOD=2.3964;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,5:15:24.03:1049,24,0	0/0:10,0:10:27.08:0,27,2536	0/0:20,0:17:42.11:0,42,2678	0/0:13,0:11:27.04:0,27,1620	0/0:12,0:12:33.11:0,33,3857	0/0:12,0:12:33.11:0,33,3355	0/0:22,0:22:60.21:0,60,4917	0/0:19,0:19:45.15:0,45,3399	0/0:20,0:20:51.18:0,51,4648	0/0:16,0:16:45.15:0,45,4839	0/0:7,0:7:18.06:0,18,2063	0/0:19,0:19:51.18:0,51,5489	0/0:14,0:14:39.13:0,39,4660	0/0:29,0:29:87.28:0,87,8441	0/0:24,0:24:66.21:0,66,7974	0/0:23,0:23:54.19:0,54,6483	0/0:32,0:31:84.23:0,84,8048	0/0:25,0:25:63.18:0,63,6673	1/1:8,3:10:24.04:882,24,0	1/1:2,5:7:15.05:953,15,0	0/0:17,0:17:45.15:0,45,4430	0/0:6,0:6:18.06:0,18,2318	0/0:12,0:12:36.02:0,36,3175	0/0:22,0:22:51.14:0,51,4353	0/0:10,0:10:27.09:0,27,3314	0/0:21,0:21:57.20:0,57,5931	1/1:3,8:11:9.03:686,9,0	0/0:4,0:4:9.03:0,9,902
chr10	87787077	.	GA	G	1345.95	PASS	AB=0.974;AC=30;AF=0.536;AN=56;BaseQRankSum=10.744;DP=465;FS=4.078;HRun=11;HaplotypeScore=126.5442;InbreedingCoeff=0.4178;MQ=55.21;MQ0=4;MQRankSum=-5.569;QD=4.40;ReadPosRankSum=0.935;VQSLOD=1.6539;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:22:8.30:8,0,62	0/1:5,0:5:3.24:10,0,3	0/1:17,0:8:10.64:11,0,85	0/0:17,0:9:3.92:0,4,55	0/0:21,0:21:51.12:0,51,538	1/1:10,6:17:36.49:244,36,0	1/1:2,10:11:21.96:109,22,0	0/0:23,1:23:10.73:0,11,508	0/0:14,0:14:31.32:0,31,323	0/1:17,0:21:11.35:11,0,35	0/1:7,0:7:0.54:1,0,3	0/1:17,1:18:21.10:74,0,21	0/1:13,3:16:27.18:102,0,27	1/1:9,2:12:6.78:66,7,0	0/0:21,0:21:51.13:0,51,544	0/0:20,0:20:38.20:0,38,442	0/1:27,0:27:9:20,0,9	1/1:19,8:27:35.61:265,36,0	0/0:9,0:9:5.11:0,5,25	1/1:17,0:17:11.65:31,12,0	0/0:10,0:12:29.74:0,30,283	1/1:9,3:12:29.57:224,30,0	1/1:13,4:17:24.02:162,24,0	1/1:7,7:14:14.54:119,15,0	0/0:18,1:19:20.44:0,20,408	1/1:20,0:19:11.99:41,12,0	1/1:18,0:19:5.55:30,6,0	1/1:2,0:2:3.11:9,3,0
chr10	87787083	.	A	AC	698.71	PASS	AB=0.969;AC=12;AF=0.214;AN=56;BaseQRankSum=2.888;DP=467;FS=1.582;HRun=0;HaplotypeScore=128.4165;InbreedingCoeff=0.3761;MQ=53.74;MQ0=6;MQRankSum=2.289;QD=4.75;ReadPosRankSum=1.066;VQSLOD=3.3254;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:22:42.81:0,43,296	0/0:6,0:6:15.19:0,15,114	0/0:18,0:8:8.40:0,8,116	0/0:20,0:8:10.05:0,10,122	0/0:21,0:21:54.03:0,54,721	0/1:17,0:17:0.27:98,0,0	0/1:14,0:13:15.98:78,0,16	0/0:27,0:25:71.90:0,72,869	0/0:13,0:13:37.35:0,37,474	0/0:18,0:17:47.27:0,47,364	0/0:10,0:10:13.22:0,13,105	0/1:15,1:16:35.22:130,0,35	0/1:16,1:17:40.27:40,0,44	0/1:12,1:12:20.84:41,0,21	0/0:20,0:20:57.17:0,57,763	0/0:21,0:21:63.06:0,63,758	0/0:30,0:28:59.58:0,60,413	1/1:24,2:25:24.08:160,24,0	0/0:9,0:7:17.44:0,17,108	0/0:15,0:15:32.35:0,32,242	0/0:11,0:11:22.60:0,23,346	1/1:13,1:14:7.27:145,7,0	1/1:10,3:13:17.02:127,17,0	0/1:17,0:17:31.90:43,0,32	0/0:19,0:19:57.10:0,57,687	0/0:19,0:18:47.83:0,48,408	0/0:19,0:19:48.46:0,48,350	0/0:2,0:2:6.01:0,6,57
chr10	87787084	.	AAAAAC	A	2825.27	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=5.113;DP=465;FS=5.024;HRun=0;HaplotypeScore=143.5329;InbreedingCoeff=0.5169;MQ=53.82;MQ0=6;MQRankSum=-8.812;QD=11.44;ReadPosRankSum=-0.120;VQSLOD=2.7028;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:18.63:316,19,0	1/1:6,0:6:15.44:135,15,0	0/1:18,0:8:2.18:2,0,80	0/0:20,0:8:4.10:0,4,73	0/0:21,0:21:60.42:0,60,1383	0/0:17,0:17:10.44:0,10,178	0/1:14,0:13:17.59:18,0,201	0/0:28,0:26:75.37:0,75,1438	0/0:13,0:13:15.23:0,15,777	1/1:16,2:17:30.47:391,30,0	1/1:10,0:10:18.35:121,18,0	0/0:15,0:15:6:0,6,329	0/0:17,0:17:7.29:0,7,334	0/1:13,0:12:26.13:26,0,45	0/0:20,0:20:34.18:0,34,1197	0/0:19,0:19:43.20:0,43,1150	1/1:28,2:28:53.48:526,53,0	0/1:26,0:25:75.73:76,0,214	1/1:9,0:7:7.75:100,8,0	1/1:12,2:14:38.67:386,39,0	0/0:11,0:11:33.11:0,33,753	0/1:14,0:14:14.33:14,0,64	0/1:13,0:13:34.79:35,0,88	0/0:17,0:17:23.09:0,23,175	0/0:20,0:20:60.19:0,60,1442	1/1:19,0:18:42.33:356,42,0	1/1:19,1:20:51.15:484,51,0	1/1:2,0:2:5.96:43,6,0
chr10	87787085	.	AAAAC	A	4818.50	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=5.163;DP=475;FS=0.000;HRun=0;HaplotypeScore=132.0756;InbreedingCoeff=0.2193;MQ=56.02;MQ0=7;MQRankSum=-10.801;QD=14.17;ReadPosRankSum=-1.754;VQSLOD=3.9952;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,9:21:32.72:508,33,0	1/1:2,4:6:17.99:242,18,0	0/1:19,0:10:10.48:10,0,51	0/1:21,0:9:8.59:9,0,50	0/0:22,0:22:63.42:0,63,1235	0/1:18,0:18:27.93:28,0,43	0/1:13,0:12:66.02:66,0,107	0/0:29,0:27:77.92:0,78,1327	0/0:13,0:13:15.22:0,15,684	1/1:12,7:18:47.85:566,48,0	1/1:10,1:11:23.81:211,24,0	0/1:13,0:14:14.03:14,0,229	0/1:16,0:17:51.54:52,0,194	0/1:12,0:12:24.50:73,0,24	0/0:21,0:21:37.17:0,37,1070	0/0:19,0:19:37.43:0,37,999	1/1:22,8:28:61.40:712,61,0	0/1:25,0:26:88.82:162,0,89	1/1:10,0:7:13.83:132,14,0	1/1:7,7:14:38.85:485,39,0	0/0:11,0:11:33.09:0,33,648	0/1:13,0:14:10.10:90,0,10	0/1:12,0:13:25.65:105,0,26	0/1:18,0:18:9.09:9,0,73	0/0:20,0:20:60.19:0,60,1218	1/1:18,1:18:44.94:620,45,0	1/1:12,8:20:42.20:624,42,0	1/1:2,0:2:6.02:98,6,0
chr10	87787086	.	AAAC	A	3079.37	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=5.558;DP=473;FS=2.876;HRun=0;HaplotypeScore=128.7814;InbreedingCoeff=0.3892;MQ=56.06;MQ0=7;MQRankSum=-9.944;QD=10.06;ReadPosRankSum=-2.848;VQSLOD=3.1326;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:38.77:316,39,0	1/1:6,0:6:16.55:151,17,0	0/1:19,0:10:6.29:6,0,27	0/1:20,0:9:13.15:13,0,56	0/0:22,0:22:62.95:0,63,1041	0/1:18,0:18:2.93:3,0,59	0/1:14,0:13:5.51:6,0,86	0/0:29,0:27:76.35:0,76,1091	0/0:13,0:13:15.18:0,15,555	1/1:18,0:17:38.28:362,38,0	1/1:10,1:11:23.77:176,24,0	0/0:14,0:14:6.45:0,6,189	0/1:17,0:17:12.46:12,0,146	0/1:14,0:13:28.65:29,0,36	0/0:21,0:21:37.13:0,37,885	0/0:19,0:19:34.76:0,35,829	1/1:28,2:28:59.45:541,59,0	0/1:27,0:26:47.70:48,0,101	1/1:9,0:6:10.23:88,10,0	1/1:13,1:14:38.93:385,39,0	0/0:11,0:11:33.03:0,33,522	0/1:13,0:13:7.64:23,0,8	0/1:14,0:13:20.47:45,0,20	0/0:18,0:18:14.84:0,15,84	0/0:20,0:20:60.16:0,60,997	1/1:5,13:17:45.02:527,45,0	1/1:20,0:20:35.29:467,35,0	1/1:0,2:2:6.02:79,6,0
chr10	87787088	.	AC	A	2868.34	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=12.990;DP=472;FS=0.000;HRun=1;HaplotypeScore=116.3410;InbreedingCoeff=0.6480;MQ=57.59;MQ0=7;MQRankSum=-8.503;QD=8.54;ReadPosRankSum=0.196;VQSLOD=0.7349;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:23.95:240,24,0	1/1:6,0:6:11.59:104,12,0	0/1:19,0:10:16.92:17,0,34	0/1:22,0:10:10.85:11,0,40	0/0:24,0:24:65.88:0,66,683	1/1:17,0:17:29.93:126,30,0	1/1:14,0:13:17.69:58,18,0	0/0:29,0:27:72.37:0,72,691	0/0:13,0:13:15.11:0,15,348	1/1:18,1:18:24.03:240,24,0	1/1:11,0:11:23.39:157,23,0	0/1:13,0:13:19.41:57,0,19	1/1:19,0:19:25.87:128,26,0	1/1:13,0:12:2.51:18,3,0	0/0:21,0:21:40.11:0,40,588	0/0:17,0:17:33.66:0,34,506	1/1:29,1:28:57.51:384,58,0	1/1:27,0:26:36.97:149,37,0	0/1:8,0:6:5.35:60,0,5	1/1:14,1:15:41.64:299,42,0	0/0:11,0:11:32.52:0,33,309	1/1:13,0:13:28.42:116,28,0	1/1:15,0:14:25.99:104,26,0	1/1:17,0:17:23.85:120,24,0	0/0:21,0:21:59.84:0,60,613	1/1:16,0:16:43.22:281,43,0	1/1:17,2:19:44.14:361,44,0	1/1:2,0:2:5.95:41,6,0
chr10	87787092	.	A	AC	2548.42	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=3.666;DP=472;FS=14.343;HRun=0;HaplotypeScore=118.2571;InbreedingCoeff=0.8762;MQ=58.73;MQ0=9;MQRankSum=-0.710;QD=17.34;ReadPosRankSum=0.617;VQSLOD=5.0459;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:35.32:0,35,263	0/0:7,0:7:17.62:0,18,119	0/0:19,0:10:14.42:0,14,88	0/0:23,0:11:12.94:0,13,122	0/0:25,0:25:69.08:0,69,932	1/1:10,7:17:21.82:436,22,0	1/1:3,10:12:35.93:344,36,0	0/0:28,0:26:75.16:0,75,956	0/0:10,0:10:30.10:0,30,419	0/0:20,0:19:49.04:0,49,309	0/0:12,0:12:23.31:0,23,146	0/1:15,0:15:10.06:170,0,10	1/1:12,5:17:16.59:285,17,0	1/1:2,8:12:6.13:146,6,0	0/0:18,0:18:51.14:0,51,691	0/0:17,0:17:51.09:0,51,673	0/0:31,0:29:45.88:0,46,292	1/1:22,7:28:38.56:401,39,0	0/0:9,0:6:17.07:0,17,130	0/0:13,0:13:34.46:0,34,192	0/0:10,0:10:30.10:0,30,405	1/1:8,4:12:32.27:380,32,0	1/1:10,3:12:28.09:284,28,0	1/1:12,6:18:31.84:305,32,0	0/0:21,0:21:63.20:0,63,866	0/0:20,0:18:47.72:0,48,261	0/0:18,0:18:46.22:0,46,281	0/0:2,0:2:5.72:0,6,30
chr10	87787095	.	AC	A	3015.69	PASS	AB=0.980;AC=38;AF=0.679;AN=56;BaseQRankSum=13.660;DP=467;FS=5.039;HRun=1;HaplotypeScore=111.5485;InbreedingCoeff=0.7618;MQ=58.92;MQ0=10;MQRankSum=-7.423;QD=9.39;ReadPosRankSum=-0.693;VQSLOD=1.0165;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:16.44:181,16,0	1/1:7,0:7:3.79:58,4,0	0/0:19,1:9:2.65:0,3,16	0/1:23,1:10:14.30:14,0,70	0/0:24,0:24:55.02:0,55,743	1/1:18,0:18:45.64:305,46,0	1/1:13,0:12:26.87:143,27,0	0/0:28,0:26:63.06:0,63,789	0/0:10,0:10:30.07:0,30,350	1/1:21,1:20:4.27:145,4,0	1/1:13,0:13:26.12:154,26,0	1/1:15,0:15:34.10:196,34,0	1/1:15,0:15:23.21:177,23,0	1/1:12,0:11:8.30:60,8,0	0/0:18,0:18:42.03:0,42,582	0/0:16,0:16:31.56:0,32,511	1/1:30,1:29:44.15:229,44,0	1/1:28,0:27:53.30:311,53,0	0/1:9,0:6:1.87:55,0,2	1/1:13,0:13:33.96:168,34,0	0/0:10,0:10:30.07:0,30,346	1/1:10,1:11:32.46:257,32,0	1/1:11,0:10:25.99:188,26,0	1/1:19,0:19:37.35:237,37,0	0/0:20,0:20:60.19:0,60,747	1/1:19,1:18:28.75:99,29,0	1/1:17,1:18:36.81:230,37,0	1/1:3,0:3:3.37:9,3,0
chr10	87787096	.	CAA	C	2273.27	PASS	AB=0.939;AC=17;AF=0.304;AN=56;BaseQRankSum=3.066;DP=471;FS=2.681;HRun=8;HaplotypeScore=119.9148;InbreedingCoeff=0.7325;MQ=56.55;MQ0=10;MQRankSum=-5.828;QD=14.21;ReadPosRankSum=-2.846;VQSLOD=0.7604;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:9,9:19:19.45:294,19,0	1/1:1,6:7:14.25:146,14,0	0/0:21,0:8:1.96:0,2,67	0/0:23,1:9:10.49:0,10,141	0/0:25,0:25:63.10:0,63,987	0/1:18,0:18:2.47:2,0,108	0/0:13,0:12:24.22:0,24,194	0/0:28,0:26:58.36:0,58,919	0/0:10,0:10:24.08:0,24,400	1/1:8,12:20:29.34:414,29,0	1/1:3,10:13:17.98:260,18,0	0/0:15,0:15:16.63:0,17,229	0/0:15,0:15:18.10:0,18,204	0/0:12,0:11:3.89:0,4,79	0/0:18,0:18:50.89:0,51,772	0/0:16,0:16:40.67:0,41,635	1/1:10,21:29:35.91:406,36,0	0/0:28,0:27:34.12:0,34,276	0/1:7,1:6:1.20:93,0,1	1/1:3,10:13:33.09:386,33,0	0/0:10,0:10:24.08:0,24,403	0/0:12,0:12:15.50:0,15,87	0/1:11,0:10:37.60:38,0,44	0/0:19,0:19:17.95:0,18,159	0/0:21,0:21:63.20:0,63,1016	0/0:9,0:19:47.33:0,47,209	1/1:8,9:17:36.19:429,36,0	0/0:1,0:3:7.83:0,8,33
chr10	87787204	.	GA	G	1176.27	PASS	AB=0.771;AC=16;AF=0.286;AN=56;BaseQRankSum=1.369;DP=466;FS=0.558;HRun=9;HaplotypeScore=92.5978;InbreedingCoeff=0.8006;MQ=55.96;MQ0=16;MQRankSum=-4.270;QD=8.98;ReadPosRankSum=-0.590;VQSLOD=2.1678;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:3,7:9:2.57:46,0,3	1/1:0,4:4:9:82,9,0	0/1:20,0:5:9.19:9,0,66	0/0:27,0:8:0.30:0,0,86	0/0:23,0:23:56.66:0,57,604	0/0:19,0:18:47.35:0,47,523	0/0:11,0:10:21.06:0,21,242	0/0:23,0:23:48.61:0,49,555	0/0:8,0:8:18.04:0,18,199	1/1:5,11:15:26.98:242,27,0	1/1:2,13:15:24.01:219,24,0	0/0:17,0:17:39.12:0,39,450	0/0:17,0:17:33.07:0,33,362	0/0:18,0:17:42.11:0,42,474	0/0:15,0:15:42.12:0,42,484	0/0:7,0:7:18.04:0,18,196	1/1:5,20:23:29.38:254,29,0	0/0:25,0:24:53.83:0,54,600	1/1:7,5:9:14.98:134,15,0	1/1:2,9:10:14.99:137,15,0	0/0:5,0:4:12.04:0,12,138	0/0:21,0:21:45.13:0,45,519	0/0:28,0:27:54.11:0,54,599	0/0:28,0:28:60.16:0,60,681	0/0:20,0:22:50.81:0,51,541	0/0:7,0:16:40.19:0,40,224	1/1:4,13:16:27.01:247,27,0	0/0:2,0:5:14.34:0,14,78
chr10	87787236	.	AC	A	5497.42	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=9.928;DP=551;FS=1.695;HRun=2;HaplotypeScore=97.3632;InbreedingCoeff=0.9796;MQ=60.33;MQ0=25;MQRankSum=-5.511;QD=20.36;ReadPosRankSum=2.934;VQSLOD=5.0819;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:20:42.02:496,42,0	0/0:7,0:7:15.66:0,16,52	0/0:54,1:13:20.06:0,20,147	0/0:54,0:16:10.88:0,11,103	0/0:28,0:28:84.11:0,84,1068	1/1:20,0:19:47.65:346,48,0	1/1:5,0:5:14.89:107,15,0	0/0:22,0:21:56.23:0,56,629	0/0:10,0:10:30.08:0,30,404	0/0:22,0:22:28.88:0,29,82	0/0:13,0:13:12.48:0,12,50	1/1:13,0:13:23.84:174,24,0	1/1:16,0:16:29.45:214,29,0	1/1:22,0:21:50.54:362,51,0	0/0:16,0:16:48.08:0,48,663	0/0:7,0:7:17.47:0,17,264	0/0:19,0:19:32.62:0,33,143	1/1:27,0:26:62.61:459,63,0	1/1:7,21:24:63.66:776,64,0	1/1:2,13:13:39.13:494,39,0	0/0:5,0:5:12.02:0,12,139	1/1:10,0:10:29.76:215,30,0	1/1:18,0:18:47.68:349,48,0	1/1:29,0:29:65.60:495,66,0	0/0:21,0:21:51.53:0,52,749	1/1:18,0:18:44.69:321,45,0	1/1:4,9:13:32.83:382,33,0	1/1:14,0:14:41.71:307,42,0
chr10	87787237	.	CCA	C	7430.37	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=9.190;DP=546;FS=0.770;HRun=0;HaplotypeScore=96.9522;InbreedingCoeff=0.9185;MQ=60.67;MQ0=24;MQRankSum=-5.080;QD=27.93;ReadPosRankSum=4.090;VQSLOD=5.7905;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:23.55:79,24,0	0/0:7,0:7:20.84:0,21,151	0/0:55,0:13:23.34:0,23,238	0/0:54,0:16:8.58:0,9,177	0/0:28,0:28:84.26:0,84,1548	1/1:2,18:19:48.15:761,48,0	1/1:0,5:5:15.05:237,15,0	0/0:22,0:21:60.05:0,60,871	0/0:10,0:10:30.08:0,30,535	0/0:23,0:23:59.75:0,60,385	0/0:11,0:11:29.66:0,30,205	1/1:0,13:13:24.08:381,24,0	1/1:1,15:16:30.97:474,31,0	1/1:0,22:21:51.17:801,51,0	0/0:17,0:17:51.09:0,51,925	0/0:8,0:8:24.01:0,24,415	0/0:19,0:19:41.73:0,42,330	1/1:1,26:26:63.18:977,63,0	1/1:28,0:24:11.59:106,12,0	1/1:15,0:13:22.31:63,22,0	0/0:4,0:4:12.03:0,12,203	1/1:0,10:10:30.02:448,30,0	1/1:0,18:18:48.11:736,48,0	1/1:1,27:29:66.22:1040,66,0	0/0:21,0:21:60.10:0,60,1067	1/1:1,17:18:45.07:659,45,0	0/1:12,0:12:6.89:24,0,7	1/1:1,13:14:42.13:644,42,0
chr10	87787591	.	A	AT	3115.27	PASS	AB=0.549;AC=16;AF=0.286;AN=56;BaseQRankSum=-12.832;DP=472;FS=1.888;HRun=9;HaplotypeScore=60.3952;InbreedingCoeff=0.8340;MQ=63.26;MQ0=0;MQRankSum=3.178;QD=23.42;ReadPosRankSum=-1.350;VQSLOD=4.0478;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:53.86:0,54,458	0/0:9,0:9:26.98:0,27,230	0/0:7,0:7:13.77:0,14,95	0/0:3,0:3:6:0,6,52	0/0:26,0:26:74.99:0,75,651	1/1:3,17:20:51.14:564,51,0	1/1:2,10:12:27.07:299,27,0	0/0:34,0:35:82.91:0,83,688	0/0:13,0:13:32.99:0,33,286	0/0:20,0:20:56.98:0,57,493	0/0:18,0:18:50.36:0,50,424	1/1:0,11:11:33.09:365,33,0	0/1:4,15:19:6.98:386,0,7	1/1:3,17:20:48.13:531,48,0	0/0:18,0:18:50.97:0,51,439	0/0:14,0:14:32.99:0,33,287	0/0:19,0:19:47.98:0,48,412	1/1:4,21:25:54.21:625,54,0	0/0:17,0:18:50.02:0,50,422	0/0:26,0:26:68.96:0,69,598	0/0:13,0:13:29.98:0,30,260	0/1:1,6:7:6.69:148,0,7	1/1:2,8:10:18.05:199,18,0	1/1:1,8:9:18.05:199,18,0	0/0:14,0:14:35.99:0,36,313	0/0:26,0:26:68.94:0,69,592	0/0:23,0:23:65.77:0,66,555	0/0:17,0:17:44.99:0,45,391
chr10	87789293	.	GGAAACAA	G	11659.99	PASS	AB=0.963;AC=17;AF=0.304;AN=56;BaseQRankSum=17.060;DP=613;FS=13.837;HRun=0;HaplotypeScore=161.6314;InbreedingCoeff=0.9210;MQ=87.72;MQ0=0;MQRankSum=-15.774;QD=54.49;ReadPosRankSum=1.585;VQSLOD=4.0265;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:66.22:1794,66,0	1/1:0,12:12:33.11:920,33,0	0/0:27,0:27:81.28:0,81,2962	0/0:25,0:25:75.19:0,75,2623	0/0:21,0:21:63.22:0,63,2624	0/0:18,0:18:54.19:0,54,2259	0/0:11,0:11:33.11:0,33,1384	0/0:39,0:39:99:0,117,4284	0/0:21,0:21:63.22:0,63,2485	1/1:0,28:28:84.28:2171,84,0	1/1:0,21:21:57.12:1383,57,0	0/0:19,0:19:57.20:0,57,2363	0/0:20,0:20:60.21:0,60,2509	0/0:26,0:26:78.25:0,78,3065	0/0:22,0:22:66.23:0,66,2610	0/0:28,0:28:84.28:0,84,3210	1/1:0,13:13:8.91:187,9,0	0/0:10,0:10:30.07:0,30,1153	1/1:0,17:17:48.15:1201,48,0	1/1:0,27:27:69.16:1618,69,0	0/0:34,0:34:99:0,99,3888	0/0:22,0:22:66.23:0,66,2748	0/0:19,0:19:57.20:0,57,2318	0/0:11,0:11:33.11:0,33,1385	0/0:21,0:21:63.20:0,63,2544	0/1:25,1:26:5.46:5,0,3068	1/1:0,35:35:86.97:2380,87,0	0/0:5,0:5:15.05:0,15,548
chr10	87790423	.	C	CA	5401	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-13.285;DP=605;FS=3.671;HRun=6;HaplotypeScore=57.8392;InbreedingCoeff=0.9833;MQ=85.13;MQ0=0;MQRankSum=-1.819;QD=30.17;ReadPosRankSum=2.653;VQSLOD=5.6342;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.20:0,90,918	0/0:2,0:2:6.01:0,6,61	0/0:18,0:18:42.05:0,42,411	0/0:23,0:23:27.77:0,28,318	0/0:26,0:26:69.15:0,69,701	1/1:2,22:24:63.20:792,63,0	1/1:5,15:20:42.13:528,42,0	0/0:31,0:31:84.14:0,84,836	0/0:19,0:19:54.10:0,54,543	0/0:23,0:23:60.13:0,60,612	0/0:17,0:17:45.10:0,45,459	1/1:3,11:14:30.07:362,30,0	1/1:0,17:17:45.14:566,45,0	1/1:2,21:23:54.17:679,54,0	0/0:24,0:24:72.16:0,72,735	0/0:15,0:15:36.07:0,36,362	0/0:22,0:22:57.13:0,57,582	1/1:1,22:23:63.20:792,63,0	0/0:24,0:24:72.14:0,72,724	0/0:27,0:27:75.12:0,75,751	0/0:20,0:20:54.12:0,54,551	1/1:1,19:20:48.15:604,48,0	1/1:2,20:22:54.64:678,55,0	1/1:5,11:16:33.08:399,33,0	0/0:22,0:22:60.13:0,60,612	0/0:23,1:24:28.41:0,28,605	0/0:35,0:35:99:0,99,1009	0/0:21,0:21:45.07:0,45,451
chr10	87792606	.	CA	C	2014.02	PASS	AB=0.880;AC=24;AF=0.429;AN=56;BaseQRankSum=2.655;DP=476;FS=4.840;HRun=9;HaplotypeScore=100.1903;InbreedingCoeff=0.3757;MQ=62.91;MQ0=3;MQRankSum=-1.371;QD=8.36;ReadPosRankSum=2.882;VQSLOD=1.9986;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:10,2:19:49.72:50,0,63	0/1:9,3:12:6.41:98,0,6	0/0:23,0:11:9.97:0,10,78	0/1:30,0:12:15.62:16,0,49	0/0:27,0:28:78.05:0,78,866	1/1:3,8:11:27.01:247,27,0	1/1:3,3:6:14.99:131,15,0	0/0:23,1:24:29.71:0,30,595	0/0:9,0:9:27.05:0,27,291	0/1:32,2:34:99:127,0,185	0/1:22,2:24:47.48:95,0,47	1/1:4,12:16:37.83:334,38,0	1/1:1,9:10:1.80:121,2,0	1/1:4,11:15:32.12:290,32,0	0/0:22,0:22:44.56:0,45,491	0/0:18,0:18:40.37:0,40,476	0/1:10,2:12:45.20:63,0,45	1/1:4,10:14:29.23:252,29,0	0/1:9,0:13:17.82:18,0,60	0/0:5,0:21:16.56:0,17,143	0/0:8,0:8:18.01:0,18,176	1/1:0,4:4:12.01:109,12,0	1/1:3,5:8:7.62:116,8,0	0/1:3,6:9:10.11:143,0,10	0/0:24,0:24:59.71:0,60,652	0/0:14,0:15:41.32:0,41,438	0/0:4,0:26:9.91:0,10,129	0/0:16,0:17:47.97:0,48,526
chr10	87792614	.	A	AC	431.15	PASS	AB=0.832;AC=9;AF=0.161;AN=56;BaseQRankSum=9.517;DP=480;FS=9.333;HRun=0;HaplotypeScore=112.1661;InbreedingCoeff=-0.0281;MQ=69.28;MQ0=3;MQRankSum=-9.307;QD=2.89;ReadPosRankSum=3.397;VQSLOD=2.5634;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:18:45.42:55,0,45	0/1:5,7:12:6.31:75,0,6	0/0:32,0:15:8.50:0,9,172	0/0:39,0:16:4.34:0,4,69	0/0:28,0:28:74.09:0,74,1063	0/0:12,0:12:1.43:0,1,109	0/0:6,0:6:17.36:0,17,100	0/0:23,0:23:65.98:0,66,831	0/0:9,0:9:27.07:0,27,345	0/1:20,11:31:89.73:90,0,233	0/1:12,12:24:62.69:139,0,63	0/0:14,0:14:9.95:0,10,148	0/0:11,0:11:17.11:0,17,86	0/0:16,0:16:38.28:0,38,218	0/0:20,0:20:48.15:0,48,643	0/0:19,0:19:54.11:0,54,671	0/1:8,3:11:31.83:32,0,84	0/0:15,0:15:37.52:0,38,225	1/1:12,1:12:1.59:112,2,0	0/1:18,0:18:34.55:35,0,52	0/0:8,0:8:18.01:0,18,199	0/0:4,0:4:3.98:0,4,35	0/0:7,0:7:17.42:0,17,105	0/0:9,0:9:12.97:0,13,104	0/0:25,0:25:69.21:0,69,906	0/0:16,0:16:40.97:0,41,571	0/1:20,0:20:18.28:29,0,18	0/0:18,0:18:40.99:0,41,602
chr10	87792615	.	A	AAAAAAAAC	6471.96	PASS	AB=0.952;AC=14;AF=0.250;AN=56;BaseQRankSum=3.966;DP=485;FS=4.704;HRun=0;HaplotypeScore=152.4045;InbreedingCoeff=0.3792;MQ=69.11;MQ0=3;MQRankSum=-9.991;QD=29.02;ReadPosRankSum=1.751;VQSLOD=4.5333;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:18:34.94:579,0,35	1/1:6,7:13:20.11:835,20,0	0/1:32,0:15:40.92:41,0,137	0/1:36,0:16:39.67:40,0,86	0/0:28,0:28:84.18:0,84,1771	0/0:12,0:12:24.98:0,25,445	0/0:6,0:6:15.55:0,16,198	0/0:24,0:24:67.25:0,67,1369	0/0:9,0:9:27.07:0,27,567	0/1:20,11:31:43.90:1380,0,44	1/1:11,12:24:35.55:1569,36,0	0/0:14,0:14:32.15:0,32,576	0/0:11,0:11:17.75:0,18,307	0/0:17,0:17:28.20:0,28,612	0/0:20,0:20:46.83:0,47,880	0/0:19,0:19:47.59:0,48,871	1/1:9,3:12:16.31:343,16,0	0/0:15,0:15:34.19:0,34,451	0/1:13,0:12:69.90:70,0,110	0/1:18,0:18:83.75:563,0,84	0/0:8,0:8:17.76:0,18,293	0/0:4,0:4:1.82:0,2,161	0/0:7,0:7:12.84:0,13,190	0/0:9,0:9:11.94:0,12,265	0/0:25,0:25:68.41:0,68,1322	0/0:16,0:16:47.71:0,48,950	1/1:20,0:20:12.01:1053,12,0	0/0:18,0:18:51.15:0,51,1097
chr10	87792652	.	AAAAAG	A	1280.38	PASS	AB=0.982;AC=14;AF=0.250;AN=56;BaseQRankSum=5.931;DP=468;FS=10.986;HRun=0;HaplotypeScore=112.2949;InbreedingCoeff=0.3408;MQ=70.21;MQ0=8;MQRankSum=-2.922;QD=7.81;ReadPosRankSum=4.406;VQSLOD=1.5371;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,1:17:99:125,0,114	1/1:8,1:9:4.69:84,5,0	0/0:36,0:12:20.57:0,21,183	0/0:33,0:11:11.47:0,11,102	0/0:35,0:34:90:0,90,1513	0/0:10,0:10:15.92:0,16,319	0/0:12,0:12:34.64:0,35,452	0/0:19,0:19:45.53:0,46,775	0/0:11,0:11:26.98:0,27,296	0/1:16,1:17:24.59:191,0,25	1/1:20,1:21:26.28:214,26,0	0/0:12,0:12:25.79:0,26,348	0/0:5,0:5:9.02:0,9,107	0/0:12,0:12:22.74:0,23,245	0/0:13,0:13:27.07:0,27,517	0/0:17,0:17:40.89:0,41,698	0/1:14,0:14:19.52:77,0,20	0/0:21,0:21:50.74:0,51,572	1/1:16,0:16:2.86:205,3,0	1/1:20,1:21:15.89:246,16,0	0/0:15,0:15:30.03:0,30,487	0/0:7,0:7:15.86:0,16,208	0/0:8,0:8:22.83:0,23,390	0/0:9,0:9:15.86:0,16,205	0/0:26,0:26:67.70:0,68,1265	0/1:22,0:22:52.10:185,0,52	0/1:15,0:15:54.42:111,0,54	0/1:11,0:11:8.91:9,0,54
chr10	87792653	.	AAAAG	A	2535.49	PASS	AB=0.833;AC=18;AF=0.321;AN=56;BaseQRankSum=3.579;DP=459;FS=3.527;HRun=0;HaplotypeScore=97.5253;InbreedingCoeff=0.7931;MQ=69.67;MQ0=8;MQRankSum=-3.555;QD=16.05;ReadPosRankSum=4.119;VQSLOD=3.3601;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:9,9:17:77.38:232,0,77	1/1:8,1:9:13.61:147,14,0	0/0:36,0:12:10.34:0,10,97	0/0:31,0:9:14.88:0,15,110	0/0:34,0:33:74.97:0,75,1144	0/0:10,0:10:17.78:0,18,271	0/0:12,0:12:18.29:0,18,321	0/0:20,0:20:27.84:0,28,580	0/0:10,0:10:20.97:0,21,215	1/1:2,14:16:38.74:453,39,0	1/1:10,11:21:25.52:255,26,0	0/0:13,0:13:29.28:0,29,324	0/0:6,0:6:11.96:0,12,105	0/0:10,0:10:16.53:0,17,169	0/0:13,0:13:24.04:0,24,385	0/0:18,0:18:37.85:0,38,549	1/1:5,9:14:20.60:258,21,0	0/0:21,0:21:43.41:0,43,423	1/1:5,9:14:19.04:315,19,0	1/1:17,4:21:38.87:425,39,0	0/0:15,0:15:30.03:0,30,415	0/0:7,0:7:17.56:0,18,170	0/0:8,0:8:22.78:0,23,316	0/0:9,0:9:13.12:0,13,154	0/0:26,0:26:62.92:0,63,994	1/1:21,1:22:7.48:297,7,0	1/1:10,5:15:23.60:295,24,0	0/1:8,0:8:28.10:63,0,28
chr10	87792654	.	AAAG	A	1890.66	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=5.572;DP=448;FS=1.727;HRun=0;HaplotypeScore=88.2645;InbreedingCoeff=0.8265;MQ=67.55;MQ0=8;MQRankSum=-3.542;QD=12.28;ReadPosRankSum=1.634;VQSLOD=3.1650;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:17:12.11:147,0,12	1/1:8,1:9:15.02:149,15,0	0/0:33,0:11:5.06:0,5,66	0/0:26,0:7:8.94:0,9,85	0/0:33,0:32:65.66:0,66,841	0/0:10,0:10:15.03:0,15,208	0/0:12,0:12:21.90:0,22,237	0/0:22,0:22:33.17:0,33,441	0/0:10,0:10:12:0,12,130	1/1:16,0:16:29.99:268,30,0	1/1:18,0:18:23.87:190,24,0	0/0:13,0:13:21.01:0,21,232	0/0:6,0:6:5.99:0,6,47	0/0:10,0:10:8.92:0,9,107	0/0:14,0:14:18.04:0,18,266	0/0:18,0:18:24.05:0,24,361	1/1:12,2:14:21.04:218,21,0	0/0:21,0:21:23.58:0,24,250	1/1:12,2:14:30.01:282,30,0	1/1:21,0:21:39.01:348,39,0	0/0:15,0:15:30.03:0,30,349	0/0:7,0:7:9:0,9,94	0/0:9,0:9:21:0,21,261	0/0:9,0:9:9.02:0,9,115	0/0:26,0:26:51.09:0,51,710	1/1:22,0:22:33.35:262,33,0	1/1:14,0:14:21:188,21,0	1/1:8,0:8:5.98:46,6,0
chr10	87792656	.	AGAAG	A	2041.65	PASS	AB=0.959;AC=23;AF=0.411;AN=56;BaseQRankSum=6.255;DP=378;FS=28.268;HRun=0;HaplotypeScore=77.6570;InbreedingCoeff=0.3892;MQ=65.31;MQ0=2;MQRankSum=-3.356;QD=10.80;ReadPosRankSum=-0.555;VQSLOD=1.1188;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:14:11.07:135,0,11	1/1:8,0:8:16.82:116,17,0	0/0:19,0:8:1.93:0,2,121	0/0:12,0:3:9.02:0,9,112	0/0:30,0:30:74.71:0,75,1365	0/0:9,0:9:9.15:0,9,274	0/1:12,0:14:35.12:35,0,447	0/0:23,0:23:56.05:0,56,948	0/0:8,0:8:17.77:0,18,292	1/1:15,0:15:17.45:178,17,0	0/1:14,0:14:2.20:88,0,2	0/1:11,0:12:12.53:13,0,345	0/0:6,0:6:1.06:0,1,77	0/1:8,0:8:64.58:65,0,126	0/0:11,0:11:27.04:0,27,447	0/0:15,0:15:20:0,20,658	1/1:11,0:11:19.77:156,20,0	0/1:19,0:21:87.44:87,0,423	1/1:12,0:12:9.37:104,9,0	1/1:14,0:14:24.82:172,25,0	0/0:14,0:14:30.04:0,30,566	0/0:7,0:7:2.81:0,3,152	0/0:9,0:9:4.98:0,5,410	0/1:9,0:9:48.87:49,0,188	0/0:23,0:23:47.96:0,48,1089	1/1:3,17:20:54.88:719,55,0	1/1:10,1:11:20.09:167,20,0	1/1:1,4:5:9.02:150,9,0
chr10	87792896	.	GA	G	15969.30	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=12.177;DP=727;FS=6.977;HRun=3;HaplotypeScore=78.7631;InbreedingCoeff=0.9999;MQ=81.48;MQ0=0;MQRankSum=-4.794;QD=32.66;ReadPosRankSum=3.911;VQSLOD=5.2016;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,49:50:99:1519,123,0	1/1:0,10:10:30.09:365,30,0	0/0:15,0:15:39.12:0,39,530	0/0:28,0:28:78.17:0,78,1033	0/0:33,0:32:84.26:0,84,1161	1/1:1,28:29:72.23:889,72,0	1/1:1,21:22:57.18:706,57,0	0/0:25,0:25:75.24:0,75,1042	0/0:32,0:32:96.31:0,96,1356	1/1:1,36:37:99:1329,111,0	1/1:0,24:24:66.21:810,66,0	1/1:1,23:24:66.21:813,66,0	1/1:0,24:24:69.22:854,69,0	1/1:1,19:20:32.25:610,32,0	0/0:25,0:25:72.24:0,72,1030	0/0:27,0:27:78.23:0,78,1091	1/1:0,18:18:48.15:594,48,0	1/1:0,19:19:51.16:628,51,0	1/1:0,23:23:69.17:824,69,0	1/1:0,18:18:48.15:591,48,0	0/0:28,0:28:81.23:0,81,1105	1/1:0,23:23:54.17:660,54,0	1/1:1,24:25:66.21:807,66,0	1/1:0,35:35:81.25:1003,81,0	0/0:25,0:25:75.25:0,75,1068	1/1:2,32:34:96.07:1149,96,0	1/1:1,37:38:99:1224,99,0	1/1:0,16:16:48.15:593,48,0
chr10	87794475	.	TTA	T	87.45	PASS	AB=0.781;AC=4;AF=0.071;AN=56;BaseQRankSum=4.416;DP=480;FS=6.073;HRun=0;HaplotypeScore=58.0447;InbreedingCoeff=-0.0900;MQ=53.49;MQ0=16;MQRankSum=-4.000;QD=2.03;ReadPosRankSum=0.347;VQSLOD=0.6301;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:2:6.02:0,6,116	0/0:4,0:4:9.03:0,9,133	0/0:25,0:7:16.80:0,17,221	0/0:41,0:6:9.03:0,9,152	0/0:18,0:18:54.18:0,54,1072	0/0:23,0:23:54.19:0,54,1086	0/0:13,0:12:33.11:0,33,671	0/0:44,0:44:99:0,132,2621	0/0:21,0:21:60.21:0,60,1189	0/1:10,2:10:18.52:19,0,517	0/0:10,5:14:21.07:0,21,402	0/0:12,0:12:36.12:0,36,671	0/0:15,0:15:42.14:0,42,853	0/0:12,0:12:36.12:0,36,684	0/0:12,0:12:33.11:0,33,653	0/0:14,0:14:39.13:0,39,792	0/1:11,3:12:18.46:18,0,515	0/0:43,0:39:99:0,102,2007	0/1:6,2:7:59.49:59,0,266	0/0:15,1:16:45.15:0,45,868	0/0:13,0:13:39.13:0,39,786	0/0:3,0:3:6.02:0,6,105	0/0:17,0:17:45.11:0,45,849	0/0:20,0:18:51.17:0,51,994	0/0:18,0:18:51.17:0,51,1019	0/0:23,0:23:69.24:0,69,1394	0/1:4,5:8:99:99,0,165	0/0:12,0:12:36.01:0,36,575
chr10	87794639	.	A	AAT	3862.94	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=0.301;DP=449;FS=12.474;HRun=0;HaplotypeScore=75.3238;InbreedingCoeff=0.9165;MQ=73.03;MQ0=4;MQRankSum=-6.318;QD=28.20;ReadPosRankSum=2.022;VQSLOD=4.4093;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,7:9:14.84:210,15,0	1/1:0,5:5:15.05:244,15,0	0/0:34,0:14:30.12:0,30,251	0/0:24,0:13:5.11:0,5,168	0/0:25,0:25:75.21:0,75,976	0/0:17,0:17:47.83:0,48,570	0/0:11,0:11:30.08:0,30,383	0/0:34,0:32:84.66:0,85,1042	0/0:16,0:16:45.10:0,45,576	1/1:3,12:15:16.51:519,17,0	1/1:4,10:13:8.82:444,9,0	0/0:13,0:13:33.07:0,33,412	0/0:11,0:11:27.07:0,27,347	0/0:11,0:11:21.06:0,21,278	0/0:16,0:16:45.12:0,45,593	0/0:14,0:14:42.12:0,42,555	1/1:5,21:26:40.52:782,41,0	0/0:25,0:25:63.11:0,63,771	1/1:2,11:12:33.08:486,33,0	1/1:0,6:7:15.05:248,15,0	0/0:9,0:9:27.04:0,27,313	0/0:3,0:3:9:0,9,93	0/0:11,0:11:30.07:0,30,386	0/0:11,0:10:27.06:0,27,342	0/0:27,0:27:78.21:0,78,1001	1/1:0,1:22:65.89:434,66,0	1/1:3,9:14:18.95:437,19,0	1/1:2,0:8:0.74:58,1,0
chr10	87795105	.	CAAT	C	1155.09	PASS	AB=0.531;AC=3;AF=0.054;AN=56;BaseQRankSum=7.029;DP=627;FS=0.718;HRun=0;HaplotypeScore=99.7494;InbreedingCoeff=0.6195;MQ=75.16;MQ0=0;MQRankSum=-2.697;QD=37.26;ReadPosRankSum=0.418;VQSLOD=4.5076;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.25:0,72,1654	0/0:9,0:9:27.08:0,27,578	0/0:20,0:20:48.13:0,48,977	0/0:16,0:16:42.14:0,42,934	0/0:23,0:23:69.22:0,69,1507	0/0:20,0:20:60.21:0,60,1363	0/0:17,0:17:45.15:0,45,1036	0/0:35,0:35:99:0,105,2271	0/0:21,0:21:63.20:0,63,1383	0/0:33,0:33:96.78:0,97,2076	0/0:20,0:20:57.20:0,57,1268	0/0:16,0:16:48.16:0,48,1104	0/0:30,0:30:87.21:0,87,1896	0/0:22,0:22:66.21:0,66,1470	0/0:40,0:40:99:0,114,2583	0/0:20,0:20:60.21:0,60,1363	0/0:21,0:21:60.14:0,60,1321	0/0:27,0:27:75.21:0,75,1680	0/0:30,0:30:87.29:0,87,1929	0/0:25,0:25:75.24:0,75,1684	0/0:16,0:16:48.16:0,48,1086	0/0:23,0:23:63.56:0,64,1460	0/0:19,0:19:57.20:0,57,1299	0/0:21,0:21:60.21:0,60,1340	0/0:21,0:21:60.21:0,60,1383	0/1:3,23:26:99:1052,0,129	0/0:26,0:25:78.27:0,78,1765	1/1:0,5:5:12.04:203,12,0
chr10	87795219	.	G	GA	4159.29	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-11.854;DP=610;FS=5.636;HRun=4;HaplotypeScore=58.0397;InbreedingCoeff=0.9990;MQ=80.54;MQ0=0;MQRankSum=-0.837;QD=35.86;ReadPosRankSum=2.355;VQSLOD=4.2217;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:87.29:1189,87,0	0/0:9,0:9:27.05:0,27,293	0/0:20,0:20:51.12:0,51,560	0/0:16,0:16:36.06:0,36,392	0/0:36,0:36:99:0,105,1172	0/0:16,0:16:48.14:0,48,544	0/0:18,0:18:45.11:0,45,500	0/0:30,0:30:84.24:0,84,953	0/0:25,0:25:72.19:0,72,806	0/0:26,0:26:66.17:0,66,738	0/0:24,0:24:69.19:0,69,774	0/0:12,0:12:33.08:0,33,365	0/0:15,0:15:39.11:0,39,441	0/0:17,0:17:51.10:0,51,564	0/0:36,0:36:99:0,102,1142	0/0:20,0:20:57.16:0,57,646	0/0:13,0:13:39.06:0,39,410	0/0:16,0:16:48.09:0,48,522	1/1:2,19:21:57.15:755,57,0	1/1:2,27:29:78.26:1067,78,0	0/0:19,0:19:51.14:0,51,578	0/0:32,0:32:84.16:0,84,918	0/0:24,0:24:63.18:0,63,714	0/0:13,0:13:39.11:0,39,442	0/0:20,0:20:54.15:0,54,612	0/0:29,0:29:81.22:0,81,910	1/1:3,31:34:84.28:1148,84,0	0/0:8,0:8:24.07:0,24,269
chr10	87795944	.	TGAGAGAGAGAGAGAGAGA	T	492.43	PASS	AB=0.870;AC=12;AF=0.273;AN=44;BaseQRankSum=1.473;DP=413;FS=8.654;HRun=0;HaplotypeScore=212.1734;InbreedingCoeff=0.4237;MQ=64.18;MQ0=16;MQRankSum=0.802;QD=5.02;ReadPosRankSum=0.703;VQSLOD=1.4509;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:9,0:9:11.94:0,12,312	0/0:22,0:11:3.01:0,3,130	0/0:22,0:12:3.01:0,3,50	0/0:11,0:10:21.54:0,22,1220	1/1:5,5:10:2.99:25,3,0	./.	0/0:20,0:20:16.30:0,16,568	0/0:8,0:8:12.02:0,12,636	0/0:24,0:24:45.15:0,45,2342	0/0:14,0:14:9.47:0,9,113	./.	0/1:13,6:20:42.94:43,0,198	1/1:9,1:10:3.01:50,3,0	0/0:14,0:14:18.06:0,18,1359	0/0:5,0:5:3.01:0,3,196	0/0:14,0:14:15.37:0,15,438	1/1:18,2:19:9.03:347,9,0	0/0:14,0:14:5.99:0,6,51	1/1:14,0:13:0.47:1,0,0	0/0:27,0:25:33.10:0,33,1548	1/1:7,0:6:3:25,3,0	./.	./.	0/0:16,0:16:24.07:0,24,1303	0/0:19,0:17:27.09:0,27,1557	0/1:17,0:17:12.93:129,0,13	./.
chr10	87795974	.	AGAGAGAGAGAGAGAGAGTGT	A	782.69	PASS	AB=0.965;AC=20;AF=0.385;AN=52;BaseQRankSum=6.718;DP=419;FS=10.410;HRun=0;HaplotypeScore=180.8695;InbreedingCoeff=0.3818;MQ=36.46;MQ0=49;MQRankSum=-3.646;QD=4.72;ReadPosRankSum=-2.402;VQSLOD=1.5016;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,5:29:1.54:33,0,2	0/1:15,0:14:64.75:65,0,221	0/0:3,0:1:3.01:0,3,108	0/0:7,0:1:3.01:0,3,35	0/0:24,0:22:57.20:0,57,2945	1/1:12,0:11:3.01:50,3,0	0/0:17,0:15:3.02:0,3,7	0/0:28,0:26:56.98:0,57,1258	0/0:11,0:10:15.05:0,15,1004	0/0:25,0:24:5.75:0,6,2379	0/0:16,0:15:5.15:0,5,46	1/1:6,0:5:3.01:30,3,0	0/1:16,0:15:16.46:16,0,217	1/1:3,0:3:3:25,3,0	0/0:14,0:12:30.57:0,31,2367	0/0:5,0:4:9.03:0,9,476	0/1:15,0:13:56.61:57,0,410	1/1:19,0:17:13.37:405,13,0	1/1:7,0:6:4.47:25,4,0	1/1:15,0:15:2.31:18,2,0	0/0:45,0:37:60.99:0,61,2304	1/1:9,0:6:0.47:1,0,0	./.	./.	0/0:17,0:13:33.11:0,33,1764	0/0:14,0:12:35.09:0,35,1573	1/1:14,0:14:8.57:215,9,0	0/0:7,0:2:3.01:0,3,186
chr10	87796000	.	TGTGTGTGTGTGTGTGC	T	2154.52	PASS	AB=0.913;AC=12;AF=0.261;AN=46;BaseQRankSum=6.706;DP=384;FS=3.973;HRun=0;HaplotypeScore=152.0036;InbreedingCoeff=0.3458;MQ=41.49;MQ0=41;MQRankSum=-6.626;QD=19.41;ReadPosRankSum=3.371;VQSLOD=2.4361;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:2.65:0,3,13	1/1:4,7:10:9.03:406,9,0	0/0:3,0:1:2.22:0,2,7	0/0:9,0:2:5.93:0,6,48	0/0:21,0:19:54.19:0,54,3394	./.	1/1:23,0:21:3.48:43,3,0	0/0:27,0:25:72.16:0,72,3005	0/0:9,0:8:15.05:0,15,977	0/1:10,4:13:99:776,0,164	1/1:9,3:11:0.94:2,1,0	1/1:7,0:6:3.01:74,3,0	0/0:15,0:14:5.97:0,6,180	./.	0/0:13,0:11:33.11:0,33,2411	0/0:7,0:6:15.05:0,15,953	0/1:9,2:12:4.45:608,0,4	0/1:19,0:17:60.15:370,0,60	0/0:14,0:12:27.50:0,27,640	0/0:17,0:16:3.15:0,3,53	0/0:37,0:29:53.77:0,54,3230	./.	0/1:11,0:10:0:0,0,0	./.	0/0:17,0:14:33.11:0,33,2126	./.	0/0:16,0:15:9.75:0,10,513	0/0:5,0:1:3.01:0,3,172
chr10	87796004	.	TGTGTGTGTGTGC	T	2011.37	PASS	AB=0.894;AC=18;AF=0.391;AN=46;BaseQRankSum=7.847;DP=387;FS=0.000;HRun=0;HaplotypeScore=143.5799;InbreedingCoeff=0.3742;MQ=45.36;MQ0=39;MQRankSum=-7.310;QD=11.49;ReadPosRankSum=2.531;VQSLOD=2.4127;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:29:2.02:24,2,0	1/1:10,0:9:9.03:290,9,0	0/0:6,0:3:1.55:0,2,4	0/0:13,0:4:6.32:0,6,35	0/0:22,0:20:54.16:0,54,2528	./.	1/1:6,17:21:3.95:79,4,0	0/0:26,0:24:67.63:0,68,2046	0/0:9,0:8:15.05:0,15,711	0/1:14,0:13:99:585,0,115	1/1:9,0:8:0.94:1,1,0	1/1:2,5:6:3.01:112,3,0	0/1:4,11:14:11.06:11,0,113	./.	0/0:13,0:11:33.11:0,33,1821	0/0:7,0:6:15.05:0,15,734	1/1:17,1:16:7.73:400,8,0	1/1:6,11:15:20.58:635,21,0	0/1:14,0:13:8.31:8,0,276	0/0:17,0:16:2.89:0,3,14	0/0:38,0:30:59.45:0,59,2456	./.	0/0:2,8:9:0:0,0,0	./.	0/0:17,0:14:33.11:0,33,1563	./.	0/1:17,0:16:10.37:10,0,216	0/0:5,0:1:3.01:0,3,123
chr10	87796026	.	TGCGCGC	T	2782.44	PASS	AB=0.500;AC=15;AF=0.300;AN=50;BaseQRankSum=8.685;DP=423;FS=0.607;HRun=0;HaplotypeScore=135.7764;InbreedingCoeff=0.7290;MQ=71.38;MQ0=18;MQRankSum=-7.259;QD=19.32;ReadPosRankSum=1.262;VQSLOD=2.8681;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,33:39:2.52:74,3,0	1/1:2,0:9:12.04:279,12,0	0/0:22,0:13:7.13:0,7,87	0/0:43,0:22:8.06:0,8,67	0/0:17,0:17:48.16:0,48,1605	./.	0/0:26,0:25:20.54:0,21,321	0/0:14,0:14:36.11:0,36,976	0/0:8,0:7:21.07:0,21,571	1/1:1,8:16:7.56:782,8,0	0/1:0,7:10:0.01:0,0,0	0/0:5,0:5:2.80:0,3,13	0/0:13,0:13:8.60:0,9,128	0/0:5,0:5:9.03:0,9,150	0/0:15,0:13:39.13:0,39,1179	0/0:4,0:4:12.04:0,12,425	1/1:6,10:17:22.19:437,22,0	0/0:15,0:15:22.66:0,23,245	1/1:1,12:13:37.64:714,38,0	1/1:2,16:18:3.01:74,3,0	0/0:35,0:34:84.27:0,84,2531	0/0:8,0:7:6.02:0,6,109	0/0:12,0:11:5.89:0,6,147	./.	0/0:15,0:13:39.13:0,39,1301	./.	1/1:1,18:19:27.04:589,27,0	0/0:2,0:1:3.01:0,3,56
chr10	87796257	.	T	TA	614.59	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.814;DP=579;FS=40.599;HRun=2;HaplotypeScore=60.1894;InbreedingCoeff=0.9801;MQ=73.91;MQ0=0;MQRankSum=-6.202;QD=27.94;ReadPosRankSum=0.610;VQSLOD=1.0961;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.21:0,66,818	0/0:6,0:6:15.05:0,15,186	0/0:17,0:17:45.13:0,45,534	0/0:11,0:11:23:0,23,276	0/0:20,0:20:60.19:0,60,744	0/0:21,0:21:63.20:0,63,781	0/0:21,0:21:60.19:0,60,744	0/0:29,0:29:78.23:0,78,944	0/0:27,0:27:81.24:0,81,991	0/0:35,0:35:99:0,105,1284	0/0:27,0:27:78.24:0,78,967	0/0:20,0:20:60.18:0,60,731	0/0:19,0:19:57.18:0,57,707	0/0:32,0:32:93.28:0,93,1139	0/0:27,0:27:78.23:0,78,955	0/0:18,0:18:54.17:0,54,670	0/0:22,0:22:51.13:0,51,617	0/0:21,0:21:48.09:0,48,563	0/0:20,0:20:60.18:0,60,745	0/0:28,0:28:78.24:0,78,967	0/0:9,0:9:21.07:0,21,260	0/0:17,0:17:45.14:0,45,558	0/0:14,0:14:36.10:0,36,434	0/0:13,0:12:39.12:0,39,483	0/0:27,0:27:75.20:0,75,894	1/1:0,13:13:36.12:517,36,0	0/0:33,0:33:87.27:0,87,1078	1/1:4,5:9:15.05:216,15,0
chr10	87796305	.	CA	C	774	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.870;DP=629;FS=15.916;HRun=2;HaplotypeScore=84.5532;InbreedingCoeff=0.9823;MQ=84.55;MQ0=0;MQRankSum=-6.570;QD=32.25;ReadPosRankSum=0.717;VQSLOD=2.0003;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.18:0,54,809	0/0:5,0:5:12.04:0,12,179	0/0:27,0:27:74.90:0,75,1081	0/0:22,0:22:61.70:0,62,846	0/0:18,0:18:54.14:0,54,784	0/0:18,0:18:48.16:0,48,714	0/0:24,0:24:72.24:0,72,1056	0/0:34,0:34:99:0,99,1425	0/0:25,0:25:75.25:0,75,1124	0/0:38,0:38:99:0,114,1643	0/0:22,0:22:63.21:0,63,949	0/0:23,0:23:69.21:0,69,989	0/0:27,0:27:81.25:0,81,1175	0/0:32,0:32:96.33:0,96,1439	0/0:34,0:34:99:0,102,1524	0/0:30,0:30:90.30:0,90,1341	0/0:20,0:20:48.16:0,48,719	0/0:24,0:24:69.23:0,69,1034	0/0:20,0:19:57.18:0,57,839	0/0:17,0:17:45.15:0,45,674	0/0:17,0:17:51.17:0,51,759	0/0:25,0:25:75.25:0,75,1119	0/0:17,0:17:51.16:0,51,744	0/0:19,0:18:57.19:0,57,842	0/0:21,0:21:63.21:0,63,942	1/1:0,17:17:48.16:622,48,0	0/0:28,0:28:75.24:0,75,1103	1/1:0,7:7:21.07:272,21,0
chr10	87796336	.	G	GACTC	9385.41	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-12.637;DP=584;FS=0.000;HRun=0;HaplotypeScore=97.1656;InbreedingCoeff=0.9881;MQ=78.77;MQ0=0;MQRankSum=-4.004;QD=59.78;ReadPosRankSum=1.006;VQSLOD=6.1921;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:16:36.12:955,36,0	1/1:1,8:9:18.06:479,18,0	0/0:26,0:25:60.20:0,60,1082	0/0:21,0:21:53.32:0,53,885	0/0:15,0:15:33.10:0,33,585	0/0:13,0:13:27.09:0,27,504	0/0:27,0:27:78.27:0,78,1444	0/0:34,0:34:90.24:0,90,1553	0/0:19,0:19:54.17:0,54,965	1/1:2,26:28:78.20:1857,78,0	1/1:2,17:19:39.13:1036,39,0	0/0:20,0:20:60.21:0,60,1107	0/0:27,0:27:78.27:0,78,1455	0/0:23,0:23:60.19:0,60,1081	0/0:33,0:33:93.26:0,93,1691	0/0:27,0:27:69.15:0,69,1241	1/1:2,24:26:60.21:1598,60,0	0/0:30,0:30:84.29:0,84,1567	1/1:3,16:19:54.14:1313,54,0	1/1:0,12:12:24.08:639,24,0	0/0:28,0:28:78.24:0,78,1443	0/0:17,0:17:48.10:0,48,826	0/0:14,0:14:30.10:0,30,559	0/0:25,0:24:75.13:0,75,1291	0/0:13,0:13:36.02:0,36,566	0/0:11,0:11:29.97:0,30,314	1/1:5,21:28:57.20:1507,57,0	0/0:3,0:3:8.97:0,9,88
chr10	87796375	.	CCTGCCT	C	356.76	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=3.449;DP=558;FS=17.940;HRun=0;HaplotypeScore=132.9373;InbreedingCoeff=0.9852;MQ=63.54;MQ0=0;MQRankSum=-3.632;QD=39.64;ReadPosRankSum=1.849;VQSLOD=2.3659;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.31:0,90,3060	0/0:9,0:9:24.08:0,24,763	0/0:19,0:16:33.11:0,33,928	0/0:18,0:16:39.02:0,39,1233	0/0:16,0:16:30.10:0,30,1015	0/0:18,0:18:48.16:0,48,1656	0/0:34,0:34:96.31:0,96,3174	0/0:29,0:29:60.21:0,60,1976	0/0:16,0:16:45.15:0,45,1495	0/0:17,0:17:45.15:0,45,1545	0/0:15,0:15:21.07:0,21,704	0/0:19,0:19:54.19:0,54,1726	0/0:24,0:24:66.20:0,66,1966	0/0:22,0:22:60.19:0,60,1814	0/0:26,0:26:75.23:0,75,2357	0/0:17,0:17:39.13:0,39,1306	0/0:21,0:21:60.21:0,60,2073	0/0:23,0:23:66.23:0,66,2272	0/0:25,0:25:63.22:0,63,2177	0/0:17,0:16:23.97:0,24,758	0/0:43,0:43:99:0,123,4211	0/0:12,0:12:28.04:0,28,900	0/0:12,0:12:30.57:0,31,1037	0/0:29,0:29:84.29:0,84,2801	0/0:10,0:10:30.10:0,30,1038	1/1:3,6:9:21.07:449,21,0	0/0:24,0:24:69.24:0,69,2336	./.
chr10	87796589	.	CAG	C	16910.68	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=14.086;DP=736;FS=0.298;HRun=0;HaplotypeScore=99.1144;InbreedingCoeff=0.9999;MQ=75.82;MQ0=0;MQRankSum=-3.255;QD=34.51;ReadPosRankSum=2.356;VQSLOD=7.1723;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,38:42:99:1427,102,0	1/1:0,11:11:30.10:420,30,0	0/0:21,0:22:55.65:0,56,937	0/0:25,0:25:39.54:0,40,848	0/0:23,0:23:63.22:0,63,1102	1/1:2,22:24:54.18:756,54,0	1/1:0,17:17:45.15:630,45,0	0/0:20,0:20:57.19:0,57,991	0/0:36,0:36:99:0,99,1746	1/1:2,33:35:99:1347,99,0	1/1:1,25:26:60.20:835,60,0	1/1:0,24:24:60.20:840,60,0	1/1:2,22:24:66.22:924,66,0	1/1:2,27:29:69.23:966,69,0	0/0:40,0:40:99:0,111,1964	0/0:26,0:26:78.24:0,78,1346	1/1:0,27:27:69.23:966,69,0	1/1:0,14:14:39.13:546,39,0	1/1:2,27:29:75.18:984,75,0	1/1:2,20:22:45.15:629,45,0	0/0:28,0:28:81.28:0,81,1451	1/1:0,35:35:69.23:965,69,0	1/1:3,18:21:45.15:630,45,0	1/1:4,36:39:99:1422,102,0	0/0:25,0:25:72.25:0,72,1296	1/1:2,26:28:78.20:1030,78,0	1/1:1,27:28:72.24:1008,72,0	1/1:0,14:14:42.14:587,42,0
chr10	87797245	.	C	CT	733.13	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.858;DP=650;FS=4.542;HRun=9;HaplotypeScore=73.8123;InbreedingCoeff=0.9792;MQ=67.45;MQ0=1;MQRankSum=-0.917;QD=22.91;ReadPosRankSum=0.632;VQSLOD=4.5640;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,1:38:71.79:0,72,852	0/0:15,0:15:29.98:0,30,260	0/0:13,0:11:26.99:0,27,236	0/0:12,0:11:14.49:0,14,113	0/0:28,0:28:71.98:0,72,625	0/0:26,0:26:71.97:0,72,625	0/0:31,0:30:71.96:0,72,625	0/0:34,1:35:38.75:0,39,553	0/0:25,0:25:62.93:0,63,543	0/0:27,0:27:74.78:0,75,638	0/0:30,0:29:71.95:0,72,621	0/0:17,0:17:47.99:0,48,417	0/0:13,0:13:29.96:0,30,257	0/0:25,0:25:68.97:0,69,599	0/0:31,1:32:53.76:0,54,690	0/0:17,0:17:32.97:0,33,286	0/0:39,0:39:99:0,105,906	0/0:9,0:8:21:0,21,182	0/0:21,0:21:44.97:0,45,391	0/0:24,0:24:56.98:0,57,495	0/0:26,0:26:56.95:0,57,490	0/0:21,0:21:50.98:0,51,443	0/0:25,0:25:47.96:0,48,417	0/0:22,0:22:56.95:0,57,491	0/0:17,0:17:38.99:0,39,338	1/1:3,22:25:43.09:686,43,0	0/0:29,0:30:76.99:0,77,653	1/1:1,6:7:15.04:166,15,0
chr10	87798316	.	TA	T	1345.50	PASS	AB=0.897;AC=13;AF=0.232;AN=56;BaseQRankSum=10.148;DP=543;FS=0.398;HRun=13;HaplotypeScore=62.9987;InbreedingCoeff=0.7632;MQ=76.42;MQ0=0;MQRankSum=1.141;QD=8.85;ReadPosRankSum=0.577;VQSLOD=2.6595;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:25:41.99:0,42,396	1/1:0,10:10:24.34:176,24,0	0/0:17,0:15:6.88:0,7,69	0/0:12,0:11:5.97:0,6,48	0/0:30,3:35:36.79:0,37,623	0/0:26,2:29:34.07:0,34,626	0/0:6,1:9:1.62:0,2,133	0/0:26,3:30:19.12:0,19,487	0/0:10,1:11:8.13:0,8,237	1/1:6,14:20:43.78:312,44,0	1/1:10,23:33:16.23:445,16,0	0/0:15,0:16:38.89:0,39,359	0/0:14,2:16:14.14:0,14,294	0/0:12,0:12:33.04:0,33,315	0/0:20,0:20:51.06:0,51,486	0/0:15,0:15:36.04:0,36,341	1/1:3,20:23:24.51:343,25,0	0/0:25,0:28:66.58:0,67,589	0/0:21,0:25:42.90:0,43,561	0/1:23,3:26:11.74:12,0,358	0/0:14,0:14:30.03:0,30,282	0/0:9,1:10:2.16:0,2,182	0/0:19,1:20:23.14:0,23,380	0/0:5,0:5:9.01:0,9,88	0/0:17,1:21:22.85:0,23,356	1/1:6,1:32:59.62:204,60,0	0/0:19,2:21:13.33:0,13,452	1/1:0,0:8:12.56:37,13,0
chr10	87799101	.	A	AT	1091.07	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-5.233;DP=388;FS=5.019;HRun=11;HaplotypeScore=47.4596;InbreedingCoeff=0.7424;MQ=62.76;MQ0=4;MQRankSum=0.619;QD=16.53;ReadPosRankSum=-0.176;VQSLOD=4.1578;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:74:0,74,577	1/1:3,2:5:6.48:62,6,0	0/0:10,0:7:3.29:0,3,44	0/0:6,0:4:8.93:0,9,64	0/0:25,0:25:46.80:0,47,346	0/0:17,0:16:44.81:0,45,347	0/0:9,0:9:20.85:0,21,157	0/0:34,0:31:67.71:0,68,514	0/0:7,0:7:20.82:0,21,152	1/1:6,10:16:27.05:274,27,0	1/1:3,4:7:14.99:141,15,0	0/0:6,0:6:14.94:0,15,116	0/0:9,0:9:20.92:0,21,163	0/0:7,0:7:11.88:0,12,86	0/0:10,0:10:26.89:0,27,209	0/0:9,0:9:26.90:0,27,209	1/1:4,30:34:75.15:761,75,0	0/0:13,0:14:31.91:0,32,235	0/0:18,1:17:2.41:0,2,200	0/0:15,0:15:29.88:0,30,232	0/0:10,0:10:11.94:0,12,93	0/0:6,0:6:17.93:0,18,138	0/0:9,0:9:17.93:0,18,139	0/1:4,0:4:6.22:6,0,58	0/0:14,0:14:32.86:0,33,255	0/0:23,1:24:26.33:0,26,387	0/0:8,0:10:18.99:0,19,125	0/0:18,0:19:26.05:0,26,328
chr10	87799785	.	GTT	G	2891.82	PASS	AB=0.561;AC=17;AF=0.304;AN=56;BaseQRankSum=0.437;DP=554;FS=8.104;HRun=14;HaplotypeScore=91.3534;InbreedingCoeff=0.9407;MQ=77.69;MQ0=0;MQRankSum=-1.049;QD=17.01;ReadPosRankSum=6.133;VQSLOD=2.5485;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:25:31.78:0,32,282	0/0:8,0:8:15:0,15,132	0/0:27,0:20:15.91:0,16,101	0/0:15,0:13:18.49:0,18,112	0/0:17,0:22:50.02:0,50,513	1/1:1,10:12:29.76:261,30,0	1/1:8,16:26:47.35:404,47,0	0/0:21,0:23:39.08:0,39,467	0/0:15,0:15:27.03:0,27,308	0/0:8,0:16:33:0,33,300	0/0:6,0:18:44.95:0,45,438	1/1:7,12:19:19.93:341,20,0	1/1:5,14:19:50.92:455,51,0	1/1:8,6:15:13.69:273,14,0	0/0:29,0:30:83.01:0,83,1000	0/0:22,0:25:65.16:0,65,798	0/0:13,0:26:63.07:0,63,633	1/1:6,13:19:32.72:346,33,0	0/0:16,0:17:23.15:0,23,179	0/0:12,0:26:52.41:0,52,450	0/0:10,0:14:26.57:0,27,332	1/1:5,12:21:17.42:352,17,0	0/1:5,16:23:0.73:350,0,1	1/1:3,11:16:23.75:316,24,0	0/0:12,0:12:20.99:0,21,238	0/0:12,0:28:68.47:0,68,603	0/0:1,0:16:20.99:0,21,200	0/0:4,0:19:36.03:0,36,335
chr10	87799869	.	C	CTT	5266.82	PASS	AB=0.861;AC=37;AF=0.661;AN=56;BaseQRankSum=5.779;DP=488;FS=0.000;HRun=14;HaplotypeScore=102.2454;InbreedingCoeff=0.7962;MQ=60.86;MQ0=0;MQRankSum=-7.117;QD=15.18;ReadPosRankSum=-5.025;VQSLOD=2.6089;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,2:31:38.14:388,0,38	1/1:2,0:5:14.92:141,15,0	0/0:11,0:9:1.74:0,2,5	0/0:2,0:3:5.70:0,6,33	0/0:20,0:23:10.43:0,10,177	1/1:10,4:16:19.79:213,20,0	1/1:12,6:21:42.34:357,42,0	0/0:8,0:10:5.65:0,6,79	0/0:13,0:15:24.61:0,25,180	1/1:5,0:15:24.29:208,24,0	1/1:14,0:15:16.76:132,17,0	1/1:15,4:20:32.89:341,33,0	1/1:12,1:14:29.95:294,30,0	1/1:9,5:15:28.93:318,29,0	0/0:16,0:17:35.64:0,36,305	0/0:20,0:21:36.75:0,37,303	1/1:12,2:24:48.24:465,48,0	1/1:8,7:16:26.43:306,26,0	1/1:13,2:17:28.74:251,29,0	1/1:18,2:21:25.90:224,26,0	0/0:16,0:18:28.90:0,29,203	1/1:8,5:14:13.21:226,13,0	1/1:12,3:17:1.69:221,2,0	1/1:5,8:14:7.93:323,8,0	0/0:22,0:22:31.70:0,32,274	1/1:22,1:26:51.54:423,52,0	1/1:20,0:23:27.52:241,28,0	1/1:17,0:20:22.77:195,23,0
chr10	87800455	.	T	TA	46.17	PASS	AB=0.908;AC=6;AF=0.107;AN=56;BaseQRankSum=4.258;DP=213;FS=7.129;HRun=0;HaplotypeScore=36.1420;InbreedingCoeff=-0.0433;MQ=64.19;MQ0=1;MQRankSum=-2.420;QD=0.74;ReadPosRankSum=1.119;VQSLOD=-0.3069;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,1:13:10.16:10,0,104	0/0:1,0:1:3.01:0,3,42	0/0:4,0:3:5.51:0,6,51	0/1:3,0:3:0:0,0,0	0/0:10,0:10:30.10:0,30,416	0/0:4,0:4:11.91:0,12,121	0/0:3,0:3:9.02:0,9,111	0/0:22,0:22:63.14:0,63,776	0/0:5,0:5:15.03:0,15,191	0/0:3,0:3:9.03:0,9,126	0/0:3,0:3:9.03:0,9,126	0/0:5,0:5:14.92:0,15,182	0/0:6,0:6:17.97:0,18,226	0/0:2,0:2:5.89:0,6,57	0/0:3,0:3:9.03:0,9,124	0/0:4,0:4:12.03:0,12,152	0/0:12,0:12:22.41:0,22,377	0/0:12,0:12:36.03:0,36,477	0/1:18,5:22:72.45:72,0,116	0/1:5,0:5:10.73:11,0,42	0/0:6,0:6:18.06:0,18,252	0/0:1,0:1:2.90:0,3,16	0/0:4,0:4:11.93:0,12,142	0/1:4,0:4:3.93:4,0,98	0/0:11,0:11:30.10:0,30,419	0/0:13,0:13:39.04:0,39,403	0/1:8,6:14:53.78:54,0,68	0/0:17,0:17:42:0,42,458
chr10	87800456	.	T	TTTATTTA	2578.54	PASS	AB=0.798;AC=16;AF=0.286;AN=56;BaseQRankSum=8.015;DP=226;FS=27.665;HRun=0;HaplotypeScore=55.1136;InbreedingCoeff=-0.3223;MQ=63.65;MQ0=1;MQRankSum=-3.997;QD=17.78;ReadPosRankSum=1.825;VQSLOD=1.0577;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:12,1:13:78.80:215,0,79	0/0:1,0:1:3.01:0,3,36	0/0:5,0:3:6.01:0,6,63	0/0:3,0:3:2.22:0,2,7	0/0:10,0:10:30.10:0,30,676	0/1:3,0:6:72.16:72,0,80	0/0:3,0:3:6.02:0,6,72	0/0:21,0:21:54.12:0,54,863	0/0:5,0:5:15.04:0,15,290	0/0:4,0:4:9.03:0,9,108	0/0:3,0:3:9.03:0,9,108	0/1:4,0:6:68.55:69,0,129	0/1:5,0:8:66.05:66,0,162	0/1:1,0:4:30.01:79,0,30	0/0:3,0:3:9.03:0,9,230	0/0:4,0:4:9.03:0,9,228	0/1:11,0:11:99:227,0,219	0/1:11,0:15:48.11:48,0,360	0/1:18,5:23:99:748,0,137	0/1:5,0:5:46.98:75,0,47	0/0:6,0:6:18.06:0,18,420	1/1:1,0:1:3.01:92,3,0	0/1:4,0:4:80.66:81,0,96	0/1:4,0:4:73.06:73,0,80	0/0:13,0:13:33.09:0,33,750	0/1:4,0:13:99:146,0,107	0/1:8,6:14:67.58:628,0,68	0/1:8,0:17:99:114,0,210
chr10	87802456	.	GTCC	G	3661.51	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.048;DP=663;FS=6.621;HRun=0;HaplotypeScore=111.7667;InbreedingCoeff=0.9998;MQ=82.68;MQ0=0;MQRankSum=-2.168;QD=39.80;ReadPosRankSum=1.831;VQSLOD=5.0617;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:31:66.22:1065,66,0	0/0:10,0:10:30.10:0,30,670	0/0:18,0:18:48.16:0,48,1026	0/0:21,0:20:54.05:0,54,1113	0/0:29,0:29:78.24:0,78,1645	0/0:23,0:23:66.23:0,66,1438	0/0:23,0:23:69.24:0,69,1541	0/0:38,0:38:96.33:0,96,2147	0/0:29,0:29:87.30:0,87,1944	0/0:23,0:23:69.24:0,69,1540	0/0:19,0:19:57.20:0,57,1271	0/0:24,0:24:72.23:0,72,1565	0/0:18,0:18:54.19:0,54,1190	0/0:25,0:25:75.26:0,75,1676	0/0:31,0:31:93.32:0,93,2051	0/0:33,0:33:93.32:0,93,2077	0/0:23,0:23:66.22:0,66,1410	0/0:19,0:19:51.18:0,51,1139	1/1:1,12:13:36.12:588,36,0	1/1:1,18:19:48.16:784,48,0	0/0:27,0:27:75.26:0,75,1648	0/0:21,0:21:60.21:0,60,1336	0/0:21,0:21:63.22:0,63,1382	0/0:32,0:32:96.33:0,96,2116	0/0:17,0:17:51.18:0,51,1140	0/0:33,0:33:87.30:0,87,1922	1/1:3,25:28:75.26:1224,75,0	0/0:14,0:14:42.11:0,42,853
chr10	87802559	.	C	CT	4098.82	PASS	AB=0.826;AC=27;AF=0.482;AN=56;BaseQRankSum=-3.101;DP=656;FS=7.537;HRun=11;HaplotypeScore=77.4295;InbreedingCoeff=0.7459;MQ=74.51;MQ0=0;MQRankSum=0.833;QD=12.50;ReadPosRankSum=1.329;VQSLOD=3.3495;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,2:40:51.46:289,51,0	0/1:13,1:14:3.56:4,0,159	0/0:21,0:19:23.56:0,24,176	0/0:13,0:14:21.76:0,22,132	0/0:28,1:29:41.28:0,41,503	1/1:4,19:23:45.09:457,45,0	0/1:9,12:21:47.86:290,0,48	0/0:34,1:36:43.26:0,43,509	0/1:18,2:20:14.27:14,0,260	0/0:31,1:33:43.31:0,43,509	0/0:32,0:33:76.70:0,77,586	1/1:2,22:24:51.10:518,51,0	1/1:4,14:18:9.83:281,10,0	1/1:5,20:25:36.07:366,36,0	0/0:26,0:26:62.71:0,63,487	0/0:24,1:27:53.17:0,53,503	0/0:32,1:33:62.20:0,62,665	1/1:2,8:11:0.13:215,0,0	1/1:8,1:18:9.10:154,9,0	1/1:4,0:18:29.12:154,29,0	0/0:17,0:17:38.84:0,39,302	1/1:7,16:23:33.07:335,33,0	1/1:9,15:25:9.66:266,10,0	1/1:2,21:24:47.16:512,47,0	0/0:29,0:29:62.46:0,62,473	0/0:18,1:19:11.38:0,11,271	1/1:2,2:24:42.94:246,43,0	0/0:10,0:10:23.34:0,23,184
chr10	87803138	.	A	AAAACAAAC	9552.61	PASS	AB=0.583;AC=15;AF=0.268;AN=56;BaseQRankSum=4.521;DP=716;FS=1.737;HRun=0;HaplotypeScore=191.3571;InbreedingCoeff=0.8877;MQ=68.55;MQ0=0;MQRankSum=-11.478;QD=48.49;ReadPosRankSum=-1.591;VQSLOD=4.2104;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:41:45.81:1871,46,0	1/1:2,0:4:5.96:45,6,0	0/0:30,0:27:21.54:0,22,478	0/0:19,0:18:20.19:0,20,514	0/0:35,0:35:87.30:0,87,2158	0/0:23,0:23:54.16:0,54,1242	0/0:30,0:30:63.17:0,63,1362	0/0:35,0:35:51.16:0,51,1089	0/0:22,0:22:45.15:0,45,1090	0/1:4,0:14:43.82:213,0,44	1/1:8,0:16:27.01:296,27,0	0/0:22,0:22:51.16:0,51,1229	0/0:22,0:22:45.15:0,45,1136	0/0:24,0:24:51.16:0,51,1218	0/0:40,0:40:81.28:0,81,2024	0/0:33,0:33:78.26:0,78,1906	1/1:13,0:27:47.96:465,48,0	0/0:18,0:18:39.13:0,39,972	1/1:15,9:28:57.13:1646,57,0	1/1:17,12:31:51.07:1800,51,0	0/0:29,0:29:63.19:0,63,1464	0/0:27,0:27:57.19:0,57,1314	0/0:32,0:32:72.25:0,72,1833	0/0:23,0:23:50:0,50,1165	0/0:24,0:24:42.14:0,42,1075	0/0:21,0:22:32.67:0,33,1309	1/1:14,21:36:78.27:3218,78,0	0/0:9,0:9:27.09:0,27,691
chr10	87804303	.	TA	T	3140.30	PASS	AB=0.682;AC=29;AF=0.518;AN=56;BaseQRankSum=6.556;DP=431;FS=42.376;HRun=11;HaplotypeScore=63.3190;InbreedingCoeff=0.8396;MQ=54.13;MQ0=2;MQRankSum=-4.776;QD=15.17;ReadPosRankSum=0.447;VQSLOD=1.2536;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:33:71.90:591,72,0	0/0:8,0:8:24.05:0,24,246	0/0:9,0:4:8.05:0,8,67	0/1:5,1:4:0.16:0,0,0	0/0:27,0:27:32.65:0,33,533	1/1:1,8:9:23.97:197,24,0	1/1:1,5:6:8.98:74,9,0	0/0:40,0:37:84.14:0,84,871	0/0:16,2:18:11.46:0,11,327	0/0:14,0:14:39.10:0,39,416	0/0:12,0:12:27.04:0,27,276	0/1:2,7:9:0.84:105,0,1	1/1:1,8:9:17.96:148,18,0	1/1:0,8:8:20.98:172,21,0	0/0:16,0:16:33.05:0,33,340	0/0:22,0:22:54.10:0,54,562	0/0:27,2:29:16.85:0,17,571	1/1:3,10:12:23.93:191,24,0	0/1:6,9:12:2.04:192,0,2	1/1:3,15:18:41.91:342,42,0	0/0:12,0:12:27.07:0,27,287	1/1:1,4:5:8.98:74,9,0	1/1:4,9:13:14.92:117,15,0	1/1:1,8:9:20.98:172,21,0	0/0:16,1:17:17.43:0,17,371	1/1:2,16:17:47.94:393,48,0	1/1:3,9:12:6.51:155,7,0	1/1:3,20:23:28.12:430,28,0
chr10	87804449	.	TG	T	4520.25	PASS	AC=48;AF=1.000;AN=48;DP=262;FS=0.000;HRun=4;HaplotypeScore=94.7457;InbreedingCoeff=-0.0455;MQ=28.53;MQ0=0;QD=19.07;VQSLOD=3.9940;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:18:15.05:180,15,0	1/1:1,8:9:21.06:252,21,0	./.	./.	./.	1/1:1,11:12:27.08:315,27,0	1/1:1,4:5:6.01:72,6,0	1/1:1,20:21:57.17:678,57,0	1/1:1,5:6:9.03:108,9,0	1/1:0,11:11:30.09:360,30,0	1/1:0,8:8:8.98:92,9,0	1/1:0,7:7:9.03:108,9,0	1/1:0,8:8:3.01:36,3,0	1/1:0,9:9:18.05:207,18,0	1/1:2,9:11:9.03:108,9,0	1/1:2,11:13:30.09:359,30,0	1/1:2,9:11:12.04:144,12,0	1/1:0,6:6:18.06:216,18,0	1/1:6,7:10:21.06:252,21,0	1/1:3,8:11:6.02:72,6,0	./.	1/1:0,4:4:9.03:108,9,0	1/1:0,4:4:3.01:36,3,0	1/1:1,6:7:6.02:72,6,0	1/1:1,17:18:27.08:321,27,0	1/1:9,0:9:23.61:162,24,0	1/1:1,12:12:18.06:216,18,0	1/1:3,0:3:8.73:50,9,0
chr10	87804452	.	GGAT	G	492.94	PASS	AB=1.000;AC=9;AF=0.188;AN=48;BaseQRankSum=-1.809;DP=232;FS=12.761;HRun=0;HaplotypeScore=109.1974;InbreedingCoeff=0.4978;MQ=28.70;MQ0=0;MQRankSum=-0.213;QD=17.00;ReadPosRankSum=2.271;VQSLOD=2.9718;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:14.51:0,15,81	0/0:8,0:8:20.51:0,21,126	./.	./.	./.	0/0:11,0:11:21.84:0,22,142	0/0:4,0:4:3.31:0,3,21	0/0:20,0:20:53.44:0,53,353	0/0:5,0:5:8.84:0,9,56	0/0:11,0:11:26.19:0,26,162	0/1:8,0:8:7.90:14,0,8	0/0:7,0:7:8.77:0,9,52	0/0:8,0:8:2.90:0,3,16	0/0:9,0:9:14.53:0,15,90	0/0:9,0:9:2.20:0,2,19	0/0:11,0:11:26.32:0,26,163	0/0:9,0:9:3.06:0,3,21	0/0:6,0:6:17.75:0,18,116	0/0:7,0:7:20.74:0,21,139	0/0:8,0:8:5.87:0,6,36	./.	0/0:4,0:4:2.19:0,2,19	1/1:4,0:4:0.89:2,1,0	1/1:6,0:6:1.77:4,2,0	0/0:17,0:17:20.40:0,20,134	1/1:0,8:8:24.08:425,24,0	0/0:12,0:11:13.71:0,14,81	1/1:0,3:3:9.03:167,9,0
chr10	87804603	.	C	CCTTCCTTTTTTT	3056.97	PASS	AB=0.682;AC=3;AF=0.054;AN=56;BaseQRankSum=-0.658;DP=519;FS=5.996;HRun=0;HaplotypeScore=192.3542;InbreedingCoeff=0.6304;MQ=78.82;MQ0=0;MQRankSum=-6.045;QD=127.37;ReadPosRankSum=-0.353;VQSLOD=3.5488;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:36.12:0,36,1243	0/0:7,0:7:18.52:0,19,596	0/0:21,0:20:57.19:0,57,1864	0/0:21,0:21:47.47:0,47,1842	0/0:18,0:18:36.12:0,36,1295	0/0:18,0:18:47.35:0,47,1561	0/0:19,0:19:54.18:0,54,1856	0/0:25,0:25:69.20:0,69,2339	0/0:36,0:36:93.28:0,93,3295	0/0:16,0:16:45.15:0,45,1513	0/0:8,0:8:21.07:0,21,736	0/0:13,0:13:33.08:0,33,1044	0/0:32,0:32:90.31:0,90,3325	0/0:14,0:14:39.12:0,39,1322	0/0:32,0:32:93.32:0,93,3350	0/0:33,0:33:84.29:0,84,3004	0/0:23,0:23:66.18:0,66,2330	0/0:14,0:14:42.14:0,42,1582	0/0:11,0:11:33.06:0,33,960	0/0:15,0:15:36.12:0,36,1368	0/0:26,0:26:69.21:0,69,2326	0/0:8,0:8:18.06:0,18,651	0/0:9,0:9:24.08:0,24,874	0/0:16,0:16:45.11:0,45,1612	0/0:20,0:20:54.19:0,54,1932	0/1:8,6:15:68.91:2177,0,69	0/0:18,0:17:41.73:0,42,1474	1/1:5,4:9:18.06:984,18,0
chr10	87804616	.	T	TC	1037.68	PASS	AB=0.888;AC=19;AF=0.339;AN=56;BaseQRankSum=-0.426;DP=456;FS=22.488;HRun=10;HaplotypeScore=65.1481;InbreedingCoeff=0.5434;MQ=66.37;MQ0=0;MQRankSum=3.186;QD=6.03;ReadPosRankSum=-3.491;VQSLOD=-0.4498;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:13,9:22:12.48:120,12,0	1/1:3,2:5:3.01:32,3,0	0/1:13,0:11:12.07:12,0,50	0/0:16,0:16:11.75:0,12,119	0/1:10,1:12:4.21:4,0,108	0/0:17,0:17:32.45:0,32,264	0/0:18,1:19:47.90:0,48,390	0/1:21,0:21:9.68:10,0,62	0/0:28,0:29:58.95:0,59,473	1/1:5,5:10:12.01:119,12,0	1/1:7,0:7:5.96:44,6,0	0/0:8,0:11:20.01:0,20,153	0/0:28,0:29:61.92:0,62,495	0/0:13,1:14:3.95:0,4,239	0/0:27,0:27:65.88:0,66,541	0/0:25,0:25:53.91:0,54,443	1/1:18,3:24:45.65:348,46,0	0/0:15,0:16:46.93:0,47,368	1/1:5,5:10:12.03:128,12,0	0/1:4,10:15:8.90:102,0,9	0/0:22,0:24:46.86:0,47,366	0/0:10,0:10:20.97:0,21,172	0/0:9,0:9:14.93:0,15,116	0/0:15,0:15:32.95:0,33,270	0/0:19,0:19:38.87:0,39,311	0/1:15,1:16:7.31:7,0,141	1/1:3,13:17:8.45:294,8,0	0/0:3,0:4:11.03:0,11,80
chr10	87804667	.	TG	T	410.83	PASS	AB=0.565;AC=3;AF=0.054;AN=56;BaseQRankSum=6.616;DP=502;FS=0.940;HRun=4;HaplotypeScore=64.1858;InbreedingCoeff=0.7519;MQ=87.68;MQ0=1;MQRankSum=-2.840;QD=24.17;ReadPosRankSum=0.967;VQSLOD=2.5364;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.18:0,60,817	0/0:11,0:11:33.10:0,33,443	0/0:18,0:18:25.45:0,25,531	0/0:28,0:28:77.80:0,78,977	0/0:11,0:11:20.81:0,21,287	0/0:32,0:32:90.77:0,91,1245	0/0:32,0:32:90.29:0,90,1242	0/0:32,0:32:90.28:0,90,1211	0/0:26,0:26:78.26:0,78,1085	0/0:19,0:19:54.18:0,54,756	0/0:7,0:7:18.06:0,18,251	0/0:14,0:14:42.13:0,42,561	0/0:19,0:19:54.17:0,54,735	0/0:13,0:13:39.11:0,39,527	0/0:29,0:29:81.27:0,81,1131	0/0:21,0:21:60.19:0,60,816	0/0:27,0:27:75.23:0,75,1031	0/0:16,0:16:48.16:0,48,672	0/0:13,0:13:39.13:0,39,546	0/0:9,0:9:24.08:0,24,332	0/0:19,0:19:51.17:0,51,714	0/0:14,0:14:30.10:0,30,420	0/0:9,0:9:21.07:0,21,290	0/0:21,0:21:63.21:0,63,881	0/0:7,0:7:18.06:0,18,251	0/1:3,10:13:2.94:367,0,3	0/0:14,0:14:36.12:0,36,502	1/1:0,4:4:12.04:144,12,0
chr10	87804732	.	T	TG	818.89	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.091;DP=619;FS=8.628;HRun=3;HaplotypeScore=71.5451;InbreedingCoeff=0.9832;MQ=88.01;MQ0=0;MQRankSum=-5.824;QD=28.24;ReadPosRankSum=0.210;VQSLOD=2.2619;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1246	0/0:12,0:12:36.10:0,36,420	0/0:26,0:26:62.95:0,63,726	0/0:25,0:25:69.17:0,69,803	0/0:19,0:19:54.15:0,54,636	0/0:28,0:28:81.25:0,81,972	0/0:22,0:22:60.14:0,60,700	0/0:30,0:30:84.20:0,84,979	0/0:21,0:21:63.19:0,63,755	0/0:28,0:28:84.22:0,84,972	0/0:14,0:14:36.11:0,36,428	0/0:17,0:17:51.16:0,51,611	0/0:25,0:25:69.21:0,69,825	0/0:14,0:14:36.11:0,36,432	0/0:37,0:37:90.23:0,90,1062	0/0:30,0:30:90.28:0,90,1079	0/0:37,0:37:99:0,108,1271	0/0:20,0:20:54.15:0,54,634	0/0:15,0:15:45.12:0,45,522	0/0:19,0:19:48.10:0,48,557	0/0:17,0:17:45.12:0,45,527	0/0:16,0:16:45.14:0,45,539	0/0:17,0:17:51.16:0,51,610	0/0:26,0:26:72.22:0,72,864	0/0:16,0:16:48.14:0,48,569	1/1:5,20:25:27.16:772,27,0	0/0:22,0:22:66.16:0,66,775	1/1:0,4:4:12.04:163,12,0
chr10	87805684	.	CCTTTT	C	3097.47	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=0.695;DP=579;FS=0.878;HRun=0;HaplotypeScore=130.9131;InbreedingCoeff=0.7931;MQ=64.11;MQ0=13;MQRankSum=-5.956;QD=14.68;ReadPosRankSum=1.152;VQSLOD=3.0765;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:64.21:732,64,0	0/0:11,0:11:26.96:0,27,428	0/0:47,0:21:20.34:0,20,282	0/0:52,0:17:8.98:0,9,91	0/0:27,0:27:45.42:0,45,846	1/1:4,5:9:8.90:114,9,0	1/1:14,1:15:26.94:346,27,0	0/0:40,0:40:83.64:0,84,957	0/0:14,0:14:30:0,30,473	0/0:19,0:19:51.06:0,51,765	0/0:28,0:28:69.13:0,69,1191	1/1:14,0:14:27.07:346,27,0	1/1:17,0:17:28.76:280,29,0	1/1:10,0:10:21.03:239,21,0	0/0:21,0:21:44.98:0,45,667	0/0:15,0:15:29.92:0,30,449	0/0:31,0:31:75.11:0,75,1231	1/1:15,1:16:32.47:334,32,0	1/1:21,0:20:12.53:214,13,0	0/1:14,0:14:33.96:34,0,66	0/0:11,0:11:14.89:0,15,177	1/1:4,9:13:20.88:222,21,0	1/1:11,1:12:20.51:226,21,0	1/1:13,0:13:14.99:153,15,0	0/0:13,0:13:24.52:0,25,413	0/0:24,0:24:0.98:0,1,428	0/1:23,0:23:73.18:73,0,124	0/0:15,0:15:17.79:0,18,156
chr10	87805690	.	CTTTTCTTTTTTTT	C	1941.99	PASS	AB=0.972;AC=9;AF=0.161;AN=56;BaseQRankSum=-0.862;DP=601;FS=4.140;HRun=0;HaplotypeScore=218.8313;InbreedingCoeff=0.0534;MQ=56.12;MQ0=18;MQRankSum=-2.886;QD=11.63;ReadPosRankSum=2.421;VQSLOD=2.2593;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,14:33:89.84:1674,90,0	0/0:13,0:13:30.09:0,30,1217	0/0:44,0:14:15.04:0,15,385	0/0:50,0:13:19.76:0,20,178	0/0:28,0:28:63.15:0,63,2391	0/0:9,0:10:18.06:0,18,414	0/1:16,0:16:36.30:36,0,656	0/0:45,0:45:99:0,111,3114	0/0:17,0:17:45.12:0,45,1583	0/0:22,0:22:63.08:0,63,2101	0/0:28,0:28:78.16:0,78,3155	0/0:18,0:18:41.49:0,41,949	0/1:15,0:16:38.50:39,0,633	0/1:10,0:11:53.16:53,0,428	0/0:22,0:22:57.11:0,57,2093	0/0:15,0:15:36.10:0,36,1517	0/0:29,0:29:78.20:0,78,3228	0/0:18,0:18:34.03:0,34,897	0/1:22,0:21:15.10:15,0,798	0/0:14,0:14:16.19:0,16,971	0/0:10,0:10:24.85:0,25,476	0/0:13,0:13:24.03:0,24,514	0/0:12,0:12:2.66:0,3,426	0/1:16,0:15:24.93:25,0,61	0/0:14,0:14:37.42:0,37,1446	0/1:24,0:24:99:218,0,762	0/1:28,0:28:27.79:28,0,1975	0/0:12,0:12:20.99:0,21,238
chr10	87805691	.	TTTTC	T	3116.79	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=2.927;DP=603;FS=2.237;HRun=0;HaplotypeScore=123.3166;InbreedingCoeff=0.7490;MQ=54.89;MQ0=19;MQRankSum=-5.049;QD=13.55;ReadPosRankSum=1.520;VQSLOD=3.0457;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:76.75:740,77,0	0/0:12,0:12:29.94:0,30,442	0/0:42,0:12:19.57:0,20,264	0/0:50,0:13:10.39:0,10,100	0/0:28,0:28:39.12:0,39,710	0/1:11,0:11:12.69:99,0,13	1/1:16,1:16:17.07:305,17,0	0/0:45,0:45:95.21:0,95,986	0/0:17,0:17:32.52:0,33,426	0/0:22,0:22:56.88:0,57,770	0/0:28,0:28:74.95:0,75,1107	1/1:15,2:17:7.11:286,7,0	1/1:16,0:16:18.33:307,18,0	1/1:12,0:11:16.03:221,16,0	0/0:23,0:23:51.18:0,51,617	0/0:15,0:15:35.07:0,35,401	0/0:29,0:29:78.07:0,78,1154	1/1:18,0:18:31.53:309,32,0	1/1:21,1:21:44.02:306,44,0	0/1:14,0:14:16.94:84,0,17	0/0:10,0:10:18.63:0,19,172	1/1:12,1:13:20.87:188,21,0	1/1:15,0:15:23.14:209,23,0	1/1:13,1:13:14.93:139,15,0	0/0:16,0:16:34.87:0,35,448	0/0:24,0:24:17.03:0,17,371	0/1:28,0:28:39.52:138,0,40	0/0:12,0:12:10.71:0,11,135
chr10	87805692	.	TTTC	T	3565.89	PASS	AB=0.923;AC=25;AF=0.446;AN=56;BaseQRankSum=2.134;DP=609;FS=1.663;HRun=0;HaplotypeScore=113.3569;InbreedingCoeff=0.8782;MQ=54.08;MQ0=21;MQRankSum=-6.486;QD=15.30;ReadPosRankSum=-0.161;VQSLOD=3.5769;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:84.74:769,85,0	0/0:12,0:12:29.80:0,30,378	0/0:43,0:12:18.79:0,19,231	0/0:49,0:12:10.88:0,11,96	0/0:28,0:28:22.25:0,22,587	0/1:11,1:12:14.94:90,0,15	1/1:17,1:16:11.98:277,12,0	0/0:46,0:46:80.52:0,81,869	0/0:17,0:17:34.91:0,35,364	0/0:22,0:22:56.86:0,57,675	0/0:29,0:29:77.64:0,78,949	1/1:16,1:17:7.73:294,8,0	1/1:17,0:17:15.08:286,15,0	1/1:12,0:11:13.22:205,13,0	0/0:23,0:23:46.74:0,47,522	0/0:16,0:16:34:0,34,335	0/0:29,0:29:78.04:0,78,996	1/1:19,0:19:31.70:287,32,0	1/1:22,0:21:48.23:383,48,0	1/1:14,1:15:18.41:147,18,0	0/0:10,0:10:5.70:0,6,131	1/1:12,0:12:20.84:168,21,0	1/1:16,0:16:29.25:236,29,0	1/1:13,0:12:14.19:135,14,0	0/0:17,0:17:30.60:0,31,391	0/0:25,0:25:37.01:0,37,355	1/1:28,0:28:20.34:287,20,0	0/0:10,0:10:12.05:0,12,129
chr10	87805693	.	TTC	T	3826.21	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=0.749;DP=607;FS=6.896;HRun=0;HaplotypeScore=102.9164;InbreedingCoeff=0.8453;MQ=53.68;MQ0=22;MQRankSum=-5.977;QD=13.76;ReadPosRankSum=-1.487;VQSLOD=2.9168;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:84.42:748,84,0	0/0:12,0:12:24.83:0,25,299	0/0:43,0:12:10.76:0,11,187	0/0:49,0:12:11.25:0,11,92	0/1:27,0:27:4.83:5,0,446	1/1:12,0:12:4.66:88,5,0	1/1:19,0:17:15.34:275,15,0	0/0:46,0:46:73.36:0,73,760	0/0:16,0:16:15.78:0,16,272	0/0:22,0:22:56.78:0,57,573	0/0:27,0:27:77.07:0,77,763	1/1:17,0:17:18.30:286,18,0	1/1:17,0:17:17.55:270,18,0	1/1:12,0:11:21.65:206,22,0	0/0:24,0:24:19.09:0,19,391	0/0:16,0:16:24.30:0,24,252	0/0:28,0:28:77.86:0,78,822	1/1:19,0:19:37.56:307,38,0	1/1:20,2:21:52.75:486,53,0	1/1:14,1:15:33.84:202,34,0	0/0:10,0:10:4.51:0,5,125	1/1:12,0:12:20.82:155,21,0	1/1:16,0:16:32.59:254,33,0	1/1:13,0:12:14.70:127,15,0	0/1:19,0:18:1.25:1,0,264	0/0:27,0:27:47.53:0,48,357	1/1:26,1:27:47.48:417,47,0	0/0:9,0:9:16.16:0,16,134
chr10	87805694	.	TC	T	3899.58	PASS	AB=0.977;AC=29;AF=0.518;AN=56;BaseQRankSum=0.888;DP=605;FS=25.205;HRun=1;HaplotypeScore=94.7270;InbreedingCoeff=0.7484;MQ=53.63;MQ0=22;MQRankSum=-6.781;QD=13.09;ReadPosRankSum=-0.737;VQSLOD=1.1319;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,1:31:81.37:677,81,0	0/0:12,0:12:24.79:0,25,241	0/0:43,0:12:6.78:0,7,168	0/0:49,0:12:9.29:0,9,81	0/1:25,2:27:38.69:39,0,349	1/1:13,0:13:9.01:93,9,0	1/1:17,1:16:12.20:249,12,0	0/0:44,0:44:86.44:0,86,689	0/1:16,0:16:2.35:2,0,185	0/0:22,0:22:56.42:0,56,483	0/0:27,0:27:76.20:0,76,610	1/1:16,1:17:15.94:264,16,0	1/1:16,1:17:15.21:282,15,0	1/1:12,1:12:26.76:220,27,0	0/0:22,1:24:8.84:0,9,311	0/0:12,3:15:4.12:0,4,202	0/0:27,0:27:76.91:0,77,660	1/1:19,0:19:42.18:323,42,0	1/1:21,1:21:55.11:448,55,0	1/1:13,2:15:38.51:287,39,0	0/0:10,0:10:3.99:0,4,121	1/1:12,0:12:20.79:144,21,0	1/1:15,1:16:34.37:252,34,0	1/1:14,0:13:17.05:139,17,0	0/1:21,0:20:2.63:3,0,198	0/0:27,0:27:60.91:0,61,387	1/1:23,4:27:63.01:479,63,0	0/0:7,0:7:16.19:0,16,134
chr10	87805698	.	T	TC	612.36	PASS	AB=0.963;AC=7;AF=0.125;AN=56;BaseQRankSum=-3.051;DP=609;FS=12.453;HRun=0;HaplotypeScore=111.8422;InbreedingCoeff=0.6942;MQ=51.47;MQ0=27;MQRankSum=6.225;QD=6.88;ReadPosRankSum=4.143;VQSLOD=3.0598;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:81.10:0,81,563	1/1:14,0:14:2.67:52,3,0	0/0:41,0:10:8.13:0,8,133	0/0:47,0:10:4.48:0,4,35	0/0:28,0:28:67.34:0,67,611	0/0:14,0:13:26.74:0,27,210	0/0:17,0:15:42.60:0,43,302	0/0:40,0:40:99:0,102,859	0/0:15,0:15:40.51:0,41,372	1/1:21,1:22:27.92:207,28,0	1/1:24,3:27:30.31:308,30,0	0/0:18,0:18:49.87:0,50,397	0/0:19,0:19:49.91:0,50,400	0/0:15,0:14:32.78:0,33,275	0/0:23,0:23:56.39:0,56,420	0/0:15,0:15:34.51:0,35,312	0/1:25,1:26:10.13:183,0,10	0/0:20,0:20:47.46:0,47,365	0/0:21,0:20:56.01:0,56,437	0/0:16,0:16:39.74:0,40,291	0/0:12,0:10:23.52:0,24,200	0/0:16,0:15:25.37:0,25,161	0/0:15,0:15:37.13:0,37,267	0/0:14,0:13:4.37:0,4,82	0/0:21,0:20:53.52:0,54,529	0/0:25,0:25:40.40:0,40,402	0/0:26,0:26:58.26:0,58,401	0/0:6,0:5:14.57:0,15,110
chr10	87805713	.	TC	T	1827.37	PASS	AB=0.982;AC=28;AF=0.500;AN=56;BaseQRankSum=5.794;DP=547;FS=161.791;HRun=1;HaplotypeScore=83.6835;InbreedingCoeff=-0.1555;MQ=47.55;MQ0=23;MQRankSum=-1.572;QD=4.56;ReadPosRankSum=-2.935;VQSLOD=0.1042;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:29.79:207,30,0	0/1:11,1:12:0.47:0,0,119	1/1:19,3:4:1.08:4,1,0	0/0:32,1:6:3.42:0,3,25	0/1:28,1:29:58.17:58,0,267	0/0:17,0:16:9.32:0,9,168	0/1:19,0:17:22.54:23,0,198	0/1:28,0:28:99:111,0,205	0/0:12,1:13:11.66:0,12,132	0/0:26,0:25:62.76:0,63,539	0/0:28,0:28:46.37:0,46,413	0/1:18,0:18:89.40:89,0,177	0/1:17,0:17:74.51:115,0,75	0/1:12,0:11:51.50:51,0,109	0/1:18,2:20:86.18:90,0,86	0/1:17,0:17:99:99,0,114	0/0:28,1:29:12.03:0,12,410	0/1:18,0:18:99:115,0,140	1/1:17,0:17:17:135,17,0	0/1:17,0:17:3.98:155,0,4	0/1:8,0:6:21.81:22,0,40	0/1:18,0:17:90.39:102,0,90	0/1:10,1:11:51.15:101,0,51	0/1:11,0:10:2.82:3,0,57	0/1:25,0:24:19.68:20,0,323	1/1:15,2:17:20.13:259,20,0	1/1:27,0:27:21.18:222,21,0	1/1:5,0:3:2.80:13,3,0
chr10	87805714	.	C	CT	810.29	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=4.796;DP=544;FS=2.222;HRun=18;HaplotypeScore=92.1784;InbreedingCoeff=0.7276;MQ=47.68;MQ0=22;MQRankSum=-4.460;QD=5.37;ReadPosRankSum=0.511;VQSLOD=2.1900;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:32:45.78:295,46,0	0/0:12,0:12:23.64:0,24,189	./.	0/1:32,0:6:0:0,0,0	0/0:28,0:28:35.94:0,36,313	0/0:18,0:17:12.49:0,12,195	0/0:20,0:18:32.93:0,33,276	0/0:28,0:28:11.49:0,11,234	0/0:14,0:14:11.71:0,12,101	0/0:24,1:24:23.77:0,24,429	0/0:28,0:28:38.89:0,39,329	0/0:18,0:18:26.87:0,27,230	0/0:17,0:17:20.34:0,20,170	0/0:12,0:11:17.99:0,18,155	0/1:19,0:19:19.12:19,0,111	0/0:18,0:18:13.51:0,14,165	0/0:28,0:28:56.72:0,57,476	0/0:18,0:18:21.91:0,22,202	1/1:10,7:17:21.42:188,21,0	1/1:9,8:17:16.66:144,17,0	0/0:8,0:6:5.37:0,5,51	0/0:18,0:17:17.74:0,18,147	0/0:11,0:11:8.97:0,9,77	0/0:11,0:10:8.78:0,9,78	0/0:25,0:24:34.24:0,34,302	0/0:17,0:17:10.49:0,10,31	1/1:12,16:28:33.91:321,34,0	0/1:5,0:3:0:0,0,0
chr10	87805995	.	ACCT	A	870.69	PASS	AB=0.568;AC=3;AF=0.054;AN=56;BaseQRankSum=7.339;DP=639;FS=0.832;HRun=0;HaplotypeScore=101.7595;InbreedingCoeff=0.5920;MQ=88.18;MQ0=0;MQRankSum=-7.670;QD=33.49;ReadPosRankSum=0.078;VQSLOD=3.9706;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.25:0,84,1886	0/0:7,0:7:21.06:0,21,450	0/0:28,0:28:80.78:0,81,1561	0/0:22,0:22:63.14:0,63,1154	0/0:10,0:10:27.09:0,27,638	0/0:19,0:19:57.20:0,57,1316	0/0:29,0:29:87.28:0,87,2007	0/0:28,0:28:78.25:0,78,1687	0/0:27,0:27:81.28:0,81,1893	0/0:14,0:14:42.14:0,42,993	0/0:19,0:19:51.16:0,51,1160	0/0:32,0:32:93.31:0,93,2153	0/0:30,0:30:90.30:0,90,2073	0/0:22,0:22:63.22:0,63,1489	0/0:34,0:34:99:0,99,2246	0/0:30,0:30:90.30:0,90,2061	0/0:40,0:40:99:0,120,2740	0/0:28,0:28:84.25:0,84,1888	0/0:15,0:15:44.88:0,45,929	0/0:16,0:16:48.16:0,48,1133	0/0:39,0:39:99:0,114,2513	0/0:14,0:14:42.13:0,42,929	0/0:12,0:12:33.10:0,33,733	0/0:31,0:31:93.31:0,93,2129	0/0:14,0:14:39.13:0,39,919	0/1:5,16:21:82.08:810,0,82	0/0:25,0:25:75.24:0,75,1721	1/1:2,3:5:9.03:158,9,0
chr10	87806075	.	AC	A	697.59	PASS	AB=0.524;AC=3;AF=0.054;AN=56;BaseQRankSum=7.516;DP=667;FS=2.620;HRun=4;HaplotypeScore=68.9884;InbreedingCoeff=0.6267;MQ=79.52;MQ0=0;MQRankSum=-1.740;QD=25.84;ReadPosRankSum=1.551;VQSLOD=2.5768;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,1643	0/0:12,0:12:33.11:0,33,462	0/0:31,0:31:89.74:0,90,1159	0/0:25,0:25:66.07:0,66,833	0/0:26,0:26:75.24:0,75,1030	0/0:20,1:21:24.26:0,24,726	0/0:25,0:25:72.23:0,72,990	0/0:29,0:29:84.25:0,84,1128	0/0:25,0:25:72.22:0,72,990	0/0:28,0:28:81.27:0,81,1134	0/0:19,0:19:54.18:0,54,752	0/0:26,0:26:78.23:0,78,1044	0/0:19,0:19:54.17:0,54,736	0/0:22,0:22:60.20:0,60,840	0/0:28,0:28:84.28:0,84,1175	0/0:32,0:32:93.30:0,93,1285	0/0:33,0:33:87.29:0,87,1218	0/0:24,0:24:72.23:0,72,991	0/0:21,0:21:54.15:0,54,735	0/0:22,0:22:66.20:0,66,905	0/0:32,0:32:96.29:0,96,1310	0/0:21,0:21:60.19:0,60,822	0/0:14,0:14:39.13:0,39,541	0/0:21,0:21:57.19:0,57,798	0/0:14,0:14:36.08:0,36,477	0/1:2,20:22:17.81:654,0,18	0/0:27,0:27:78.24:0,78,1069	1/1:1,4:5:12.04:144,12,0
chr10	87806365	.	C	CT	207.23	PASS	AB=0.770;AC=2;AF=0.036;AN=56;BaseQRankSum=4.870;DP=604;FS=0.000;HRun=1;HaplotypeScore=77.9605;InbreedingCoeff=-0.0437;MQ=82.30;MQ0=0;MQRankSum=-5.008;QD=9.01;ReadPosRankSum=0.527;VQSLOD=0.9664;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,1800	0/0:6,0:6:18.06:0,18,248	0/0:31,0:28:82.96:0,83,1079	0/0:29,0:27:68.72:0,69,823	0/0:22,0:22:66.22:0,66,918	0/0:27,0:27:72.22:0,72,974	0/0:25,0:25:75.25:0,75,1049	0/0:25,0:25:75.24:0,75,1018	0/0:21,0:21:63.20:0,63,865	0/0:23,0:23:69.23:0,69,963	0/0:15,0:15:42.12:0,42,566	0/0:19,0:19:54.18:0,54,755	0/0:18,0:18:54.18:0,54,755	0/0:23,0:23:66.22:0,66,923	0/0:26,0:25:78.05:0,78,1062	0/0:26,0:26:78.25:0,78,1074	0/0:26,0:26:75.25:0,75,1049	0/0:17,1:19:3.27:0,3,601	0/0:19,0:19:57.18:0,57,782	0/0:11,0:11:30.10:0,30,419	0/0:37,0:37:99:0,102,1427	0/0:20,0:20:60.20:0,60,837	0/0:18,0:18:54.17:0,54,732	0/0:20,0:20:60.19:0,60,820	0/0:7,0:7:21.07:0,21,294	0/1:11,5:16:99:192,0,352	0/0:25,0:25:75.25:0,75,1048	0/1:5,2:7:99:104,0,147
chr10	87806432	.	GT	G	399.28	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=6.155;DP=642;FS=0.000;HRun=1;HaplotypeScore=74.4676;InbreedingCoeff=0.9958;MQ=87.81;MQ0=0;MQRankSum=-6.159;QD=30.71;ReadPosRankSum=3.157;VQSLOD=3.3518;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,157,2483	0/0:7,0:7:21.07:0,21,336	0/0:27,0:27:78.20:0,78,1154	0/0:21,0:21:54.07:0,54,778	0/0:17,0:17:51.17:0,51,815	0/0:23,0:23:69.22:0,69,1072	0/0:35,0:35:99:0,105,1679	0/0:23,0:23:69.24:0,69,1096	0/0:18,0:18:51.17:0,51,815	0/0:23,0:23:69.23:0,69,1087	0/0:13,0:13:36.12:0,36,575	0/0:32,0:32:96.31:0,96,1499	0/0:17,0:17:51.16:0,51,782	0/0:25,0:25:75.26:0,75,1191	0/0:28,0:27:84.23:0,84,1270	0/0:31,0:31:93.30:0,93,1464	0/0:23,0:23:69.19:0,69,1052	0/0:21,0:21:60.20:0,60,959	0/0:25,0:25:72.24:0,72,1123	0/0:19,0:19:54.18:0,54,856	0/0:41,0:41:99:0,117,1846	0/0:21,0:21:63.21:0,63,1000	0/0:16,0:16:48.15:0,48,739	0/0:28,0:28:84.29:0,84,1336	0/0:19,0:19:57.17:0,57,886	1/1:0,13:13:39.12:494,39,0	0/0:23,0:23:69.24:0,69,1103	./.
chr10	87806435	.	TCTGGGAGGCCTG	T	1359.97	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=6.201;DP=646;FS=0.000;HRun=0;HaplotypeScore=227.4906;InbreedingCoeff=0.9958;MQ=87.14;MQ0=0;MQRankSum=-6.402;QD=104.61;ReadPosRankSum=2.420;VQSLOD=3.3683;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,160,9257	0/0:7,0:7:21.07:0,21,1219	0/0:25,0:25:72.22:0,72,3196	0/0:23,0:23:63.20:0,63,2737	0/0:18,0:18:54.19:0,54,3163	0/0:25,0:25:72.25:0,72,4142	0/0:36,0:36:99:0,102,6035	0/0:23,0:23:66.22:0,66,3426	0/0:18,0:18:51.18:0,51,3132	0/0:23,0:23:66.23:0,66,3678	0/0:13,0:13:36.12:0,36,2174	0/0:31,0:31:93.32:0,93,5778	0/0:15,0:15:45.15:0,45,2676	0/0:25,0:25:75.26:0,75,4532	0/0:28,0:27:81.28:0,81,4819	0/0:31,0:31:90.31:0,90,5260	0/0:23,0:23:69.24:0,69,4138	0/0:21,0:21:60.21:0,60,3645	0/0:23,0:23:66.22:0,66,3842	0/0:20,0:20:57.20:0,57,3372	0/0:42,0:42:99:0,120,6748	0/0:21,0:21:63.22:0,63,3573	0/0:17,0:17:51.18:0,51,3031	0/0:28,0:28:84.29:0,84,5113	0/0:18,0:18:54.19:0,54,3274	1/1:0,13:13:39.13:1454,39,0	0/0:24,0:24:69.24:0,69,4025	./.
chr10	87806894	.	TAA	T	2603.10	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.852;DP=584;FS=0.869;HRun=13;HaplotypeScore=78.3936;InbreedingCoeff=0.9632;MQ=70.00;MQ0=0;MQRankSum=-0.126;QD=20.34;ReadPosRankSum=2.669;VQSLOD=3.3781;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,39:44:99:1007,105,0	0/0:3,0:4:8.52:0,9,95	0/0:22,0:20:24.51:0,25,274	0/0:14,0:9:5.45:0,5,144	0/0:16,0:17:39.55:0,40,508	0/0:18,0:18:45.14:0,45,633	0/0:13,0:14:38.61:0,39,513	0/0:30,0:33:78.68:0,79,1036	0/0:14,0:14:39.13:0,39,563	0/0:16,0:16:36.07:0,36,480	0/0:19,0:20:44.42:0,44,506	0/0:16,0:16:36.12:0,36,520	0/0:27,0:28:75.25:0,75,1067	0/0:23,0:27:61.51:0,62,708	0/0:22,0:23:59.65:0,60,778	0/0:31,0:33:83.73:0,84,1127	0/0:30,1:31:72.24:0,72,1033	0/0:27,0:29:74.69:0,75,970	1/1:4,10:14:30.02:289,30,0	1/1:3,16:19:38.97:378,39,0	0/0:17,0:18:42.11:0,42,539	0/0:21,0:23:53.14:0,53,693	0/0:17,0:21:42.40:0,42,490	0/0:20,0:22:53.67:0,54,744	0/0:12,0:12:30.10:0,30,435	1/1:0,17:17:51.08:494,51,0	1/1:6,13:20:38.76:361,39,0	1/1:2,12:14:27.02:261,27,0
chr10	87807412	.	T	TA	5985.40	PASS	AB=0.545;AC=33;AF=0.611;AN=54;BaseQRankSum=-3.766;DP=441;FS=1.470;HRun=9;HaplotypeScore=47.4605;InbreedingCoeff=0.7842;MQ=61.78;MQ0=31;MQRankSum=-2.393;QD=21.53;ReadPosRankSum=2.164;VQSLOD=5.4641;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:26:50.40:650,50,0	1/1:2,10:11:30.07:323,30,0	0/0:11,0:7:6.16:0,6,40	0/0:14,1:10:12.79:0,13,110	0/0:31,0:30:77.97:0,78,677	1/1:4,16:19:19.07:438,19,0	1/1:2,6:6:12.03:133,12,0	0/0:34,0:28:77.94:0,78,669	0/0:13,0:12:14.99:0,15,130	1/1:10,12:16:36.05:377,36,0	1/1:5,13:14:33.01:348,33,0	1/1:2,12:13:30.07:322,30,0	0/1:2,10:12:20.19:175,0,20	1/1:3,15:17:13.05:372,13,0	0/0:16,0:14:26.99:0,27,234	0/0:17,0:16:38.99:0,39,338	1/1:5,11:16:27.07:299,27,0	1/1:5,26:30:0.27:625,0,0	1/1:5,8:10:27.06:292,27,0	1/1:6,19:22:31.10:571,31,0	0/0:8,0:6:9:0,9,78	1/1:0,1:1:3.01:33,3,0	1/1:0,4:4:9.02:100,9,0	1/1:2,8:9:21.05:232,21,0	0/0:13,0:10:20.98:0,21,180	0/0:3,0:1:3:0,3,26	1/1:5,22:23:63.17:697,63,0	./.
chr10	87807430	.	T	TA	1536.34	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=-0.076;DP=445;FS=0.537;HRun=9;HaplotypeScore=73.9032;InbreedingCoeff=0.8155;MQ=71.82;MQ0=1;MQRankSum=-3.720;QD=15.84;ReadPosRankSum=-2.993;VQSLOD=3.2469;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:68.98:0,69,599	1/1:4,9:12:20.41:246,20,0	0/1:19,0:14:3.13:3,0,88	0/0:24,0:14:7.83:0,8,78	0/0:33,0:32:80.96:0,81,703	0/0:21,0:21:35.99:0,36,312	0/0:8,0:8:18:0,18,156	0/0:24,1:25:23.77:0,24,433	0/0:12,0:12:21:0,21,182	1/1:2,16:16:41.95:443,42,0	1/1:3,17:18:48.13:526,48,0	0/0:14,0:14:29.98:0,30,257	0/0:11,0:11:23.91:0,24,207	0/0:18,0:18:44.99:0,45,390	0/0:15,0:15:29.99:0,30,260	0/0:18,0:18:38.99:0,39,339	1/1:12,12:24:19.04:418,19,0	0/0:32,0:32:74.94:0,75,644	0/0:12,0:12:29.99:0,30,260	0/0:22,0:22:65.99:0,66,573	0/0:3,0:3:6:0,6,52	0/0:1,0:1:3:0,3,26	0/0:6,0:6:15:0,15,130	0/0:12,0:12:29.99:0,30,260	0/0:11,0:11:29.99:0,30,260	1/1:0,2:2:6.02:66,6,0	0/0:22,0:22:59.97:0,60,517	./.
chr10	87807471	.	C	CGAGGAG	426.10	PASS	AB=0.615;AC=1;AF=0.019;AN=54;BaseQRankSum=0.222;DP=470;FS=19.812;HRun=0;HaplotypeScore=109.6471;InbreedingCoeff=-0.0231;MQ=67.42;MQ0=0;MQRankSum=-3.767;QD=53.26;ReadPosRankSum=0.771;VQSLOD=2.4729;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:93.32:0,93,2121	0/0:11,0:10:27.09:0,27,616	0/0:7,0:7:21.07:0,21,467	0/0:9,0:7:15.05:0,15,342	0/0:28,0:28:75.26:0,75,1688	0/0:25,0:25:57.20:0,57,1297	0/0:9,0:9:18.06:0,18,399	0/0:30,0:30:78.22:0,78,1646	0/0:15,0:15:24.08:0,24,516	0/0:21,0:20:51.09:0,51,1041	0/0:21,0:21:63.22:0,63,1404	0/0:23,0:23:48.16:0,48,1051	0/0:13,0:13:33.11:0,33,753	0/0:19,0:19:42.14:0,42,955	0/0:18,0:18:39.13:0,39,872	0/0:17,0:17:39.05:0,39,837	0/0:28,0:28:66.23:0,66,1476	0/0:30,0:30:66.23:0,66,1500	0/0:19,0:19:51.16:0,51,1012	0/0:20,0:20:57.20:0,57,1301	0/0:5,0:5:15.05:0,15,340	0/0:3,0:3:9.03:0,9,206	0/0:8,0:8:18.06:0,18,396	0/0:13,0:13:33.11:0,33,753	0/0:13,0:13:33.11:0,33,753	0/1:3,5:8:99:500,0,116	0/0:22,0:22:57.15:0,57,1144	./.
chr10	87807571	.	A	ATCTTGGCG	806.31	PASS	AB=0.910;AC=8;AF=0.148;AN=54;BaseQRankSum=6.064;DP=540;FS=5.877;HRun=0;HaplotypeScore=146.0400;InbreedingCoeff=0.0917;MQ=57.27;MQ0=5;MQRankSum=-5.256;QD=6.30;ReadPosRankSum=-0.120;VQSLOD=2.1496;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.23:0,66,1999	0/0:7,0:7:18.06:0,18,518	0/0:9,0:6:18.06:0,18,497	0/0:16,0:13:36.12:0,36,1072	0/1:22,2:24:99:213,0,1602	0/0:14,1:15:42.14:0,42,1215	0/1:19,0:19:19.10:19,0,1383	0/0:25,0:24:69.23:0,69,2065	0/0:24,0:24:66.23:0,66,1973	0/0:19,0:18:51.18:0,51,1525	0/0:13,0:13:32.70:0,33,926	0/0:24,0:24:66.23:0,66,1948	0/0:19,0:18:48.15:0,48,1313	0/0:23,0:23:63.22:0,63,1829	0/1:25,0:26:99:101,0,1784	0/0:28,0:28:78.24:0,78,2126	0/0:24,0:24:41.67:0,42,1659	0/0:31,0:29:75.17:0,75,2142	0/0:17,0:17:51.18:0,51,1545	0/0:19,0:19:54.19:0,54,1586	0/0:23,0:21:54.19:0,54,1636	0/1:11,2:12:99:105,0,862	0/1:14,1:15:95.83:96,0,1127	0/0:28,0:28:72.25:0,72,2175	0/0:16,0:16:45.15:0,45,1323	1/1:2,0:4:9.02:194,9,0	0/1:19,4:22:99:216,0,1512	./.
chr10	87808471	.	T	TTCTTCC	12164.89	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-9.069;DP=638;FS=9.126;HRun=0;HaplotypeScore=120.7345;InbreedingCoeff=0.9717;MQ=66.45;MQ0=3;MQRankSum=-13.048;QD=41.38;ReadPosRankSum=0.158;VQSLOD=4.4365;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,16:35:30.10:865,30,0	0/0:7,0:7:15.05:0,15,314	0/0:30,0:19:20.81:0,21,362	0/0:29,0:19:20.13:0,20,354	0/0:23,0:23:60.21:0,60,1257	1/1:11,7:22:21.07:690,21,0	1/1:10,6:16:21.07:626,21,0	0/0:43,0:43:63.19:0,63,1136	0/0:19,0:19:48.11:0,48,929	0/0:14,0:14:33.11:0,33,655	0/0:17,0:17:33.11:0,33,692	1/1:8,18:27:45.15:1475,45,0	1/1:9,9:19:21.07:654,21,0	1/1:9,17:26:42.14:1323,42,0	0/0:28,0:28:69.24:0,69,1425	0/0:37,0:37:90.23:0,90,1779	0/0:17,0:17:30.08:0,30,590	1/1:7,8:17:9.03:297,9,0	1/1:12,2:14:21.04:500,21,0	1/1:4,17:24:51.13:1441,51,0	0/0:23,0:23:51.16:0,51,1033	1/1:8,21:30:45.15:1385,45,0	1/1:5,14:20:36.12:1093,36,0	1/1:11,14:25:33.07:846,33,0	0/0:29,0:29:60.21:0,60,1247	0/0:5,0:25:46.93:0,47,611	1/1:8,9:19:33.07:969,33,0	0/0:0,0:3:6.02:0,6,84
chr10	87810698	.	AC	A	10923.95	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=17.766;DP=883;FS=0.551;HRun=1;HaplotypeScore=110.8430;InbreedingCoeff=0.9999;MQ=81.49;MQ0=0;MQRankSum=-1.248;QD=38.33;ReadPosRankSum=4.366;VQSLOD=4.7092;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,178,2826	0/0:15,0:15:45.15:0,45,715	0/0:25,0:25:69.22:0,69,1055	0/0:22,0:22:63.21:0,63,961	0/0:28,0:28:84.29:0,84,1342	1/1:0,26:26:75.25:1049,75,0	1/1:0,34:34:93.31:1300,93,0	0/0:27,0:27:81.27:0,81,1264	0/0:32,0:32:96.28:0,96,1500	0/0:37,0:37:99:0,108,1722	0/0:17,0:17:51.17:0,51,812	1/1:0,41:41:99:1595,114,0	1/1:0,36:36:99:1424,102,0	1/1:0,46:46:99:1719,123,0	0/0:61,0:60:99:0,184,2873	0/0:32,0:32:96.33:0,96,1529	0/0:22,0:21:66.21:0,66,1032	1/1:0,20:20:51.17:713,51,0	0/0:27,0:27:81.28:0,81,1295	0/0:32,0:32:96.31:0,96,1509	0/0:66,0:66:99:0,196,3034	1/1:0,23:23:66.18:901,66,0	1/1:0,22:22:56.87:797,57,0	1/1:0,37:37:99:1427,102,0	0/0:19,0:19:54.18:0,54,863	0/0:41,0:41:99:0,114,1797	0/0:24,0:24:69.24:0,69,1095	0/0:11,0:11:30.08:0,30,453
chr10	87811024	.	GCATGTGTGT	G	2582.07	PASS	AB=0.588;AC=3;AF=0.054;AN=56;BaseQRankSum=9.651;DP=1307;FS=23.130;HRun=0;HaplotypeScore=372.0348;InbreedingCoeff=0.5944;MQ=56.15;MQ0=2;MQRankSum=-6.132;QD=45.30;ReadPosRankSum=1.193;VQSLOD=2.5787;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,150,6340	0/0:17,0:17:45.10:0,45,1874	0/0:42,0:28:53.96:0,54,2143	0/0:40,0:20:51.18:0,51,1833	0/0:42,0:42:86.96:0,87,3516	0/0:32,0:32:90.31:0,90,3835	0/0:48,0:48:99:0,135,5558	0/0:59,0:58:99:0,169,6031	0/0:66,0:66:99:0,178,7402	0/0:76,0:76:99:0,205,8504	0/0:18,0:18:42.04:0,42,1726	0/0:70,0:70:99:0,169,7105	0/0:58,0:58:99:0,157,6935	0/0:58,0:58:99:0,153,5937	0/0:115,0:115:99:0,301,12801	0/0:81,0:81:99:0,202,8948	0/0:35,0:35:90.29:0,90,3714	0/0:16,0:16:45.09:0,45,1649	0/0:33,0:33:78.26:0,78,2980	0/0:34,0:34:78.27:0,78,3335	0/0:105,0:105:99:0,271,11142	0/0:31,0:31:63.22:0,63,2653	0/0:30,0:30:63.22:0,63,2847	0/0:31,0:31:81.28:0,81,3486	0/0:30,0:30:75.26:0,75,3267	0/1:15,35:50:46.65:2413,0,47	0/0:24,0:24:60.19:0,60,2434	1/1:3,4:7:9.03:266,9,0
chr10	87811129	.	G	GTGTATGTA	2511.94	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=-1.885;DP=1134;FS=15.435;HRun=0;HaplotypeScore=366.9735;InbreedingCoeff=0.4772;MQ=53.76;MQ0=10;MQRankSum=-4.518;QD=16.64;ReadPosRankSum=-0.732;VQSLOD=1.1226;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:38.16:0,38,829	0/0:13,0:13:9.03:0,9,189	0/0:32,0:18:2.18:0,2,55	0/0:32,0:18:11.65:0,12,124	0/0:41,0:41:57.18:0,57,1369	0/0:36,0:36:47.98:0,48,1149	0/0:34,0:34:34.17:0,34,1145	0/0:56,0:56:84.26:0,84,1484	0/0:48,0:48:93.27:0,93,2179	0/1:66,0:66:43.84:44,0,1417	0/0:22,0:22:24.08:0,24,485	0/0:48,0:48:69.20:0,69,1545	0/0:48,0:48:72.06:0,72,1752	0/0:51,0:51:81.20:0,81,1676	0/0:91,0:93:99:0,144,3204	0/0:62,0:62:99:0,99,2335	0/1:30,0:30:22.71:23,0,641	0/0:21,0:21:27.07:0,27,597	0/0:34,0:30:48.15:0,48,1076	0/0:35,0:36:82.36:0,82,1770	0/0:83,0:86:99:0,138,2850	0/0:43,0:44:66.05:0,66,1483	0/0:23,0:24:24.08:0,24,600	0/0:27,0:27:27.05:0,27,612	0/0:32,0:32:39.12:0,39,895	1/1:31,12:49:35.63:2447,36,0	0/0:28,0:29:38.75:0,39,776	1/1:4,2:6:3.01:124,3,0
chr10	87811349	.	TCTGACACAAACC	T	6918.30	PASS	AC=22;AF=0.524;AN=42;BaseQRankSum=9.407;DP=359;FS=5.066;HRun=0;HaplotypeScore=85.7489;InbreedingCoeff=0.8408;MQ=25.06;MQ0=138;MQRankSum=-3.406;QD=64.66;ReadPosRankSum=2.837;VQSLOD=4.3973;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,5:5:9.03:338,9,0	0/0:13,0:13:36.12:0,36,1851	./.	./.	0/0:19,0:18:27.09:0,27,1218	1/1:1,10:10:24.08:902,24,0	1/1:0,2:2:3.01:113,3,0	./.	./.	0/0:25,0:20:60.16:0,60,3298	0/0:13,0:12:18.06:0,18,729	1/1:6,4:6:15.05:564,15,0	1/1:1,7:7:15.05:564,15,0	1/1:1,8:8:18.02:584,18,0	0/0:26,0:12:6.02:0,6,317	0/0:29,0:11:15.05:0,15,670	0/0:15,0:2:3.01:0,3,185	1/1:0,1:1:3.01:113,3,0	./.	1/1:2,20:21:36.12:1353,36,0	./.	1/1:0,12:12:18.06:602,18,0	1/1:1,13:14:27.09:883,27,0	./.	0/0:17,0:13:24.08:0,24,1186	0/0:21,0:8:24.08:0,24,1348	1/1:0,11:11:24.08:902,24,0	0/0:7,0:3:6.02:0,6,279
chr10	87811677	.	T	TTC	8949.69	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=7.024;DP=481;FS=11.599;HRun=0;HaplotypeScore=70.0050;InbreedingCoeff=0.9729;MQ=46.24;MQ0=22;MQRankSum=-0.131;QD=39.25;ReadPosRankSum=4.519;VQSLOD=6.4950;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:18:39.13:787,39,0	0/0:10,0:10:30.10:0,30,434	0/0:31,0:8:21.07:0,21,319	0/0:25,0:9:20.90:0,21,318	0/0:21,0:21:57.19:0,57,904	1/1:1,11:12:24.08:462,24,0	1/1:0,9:8:21.07:424,21,0	0/0:34,0:29:84.29:0,84,1340	0/0:12,0:12:36.12:0,36,572	0/0:12,0:12:36.12:0,36,517	0/0:25,0:25:75.25:0,75,1039	1/1:0,8:8:21.07:424,21,0	1/1:0,15:13:33.11:666,33,0	1/1:2,8:8:9.03:180,9,0	0/0:19,0:19:57.19:0,57,908	0/0:21,0:21:63.21:0,63,992	0/0:21,0:21:51.17:0,51,724	1/1:0,23:22:51.17:1034,51,0	1/1:3,9:10:27.07:459,27,0	1/1:2,28:25:60.14:1163,60,0	0/0:9,0:8:24.08:0,24,383	1/1:0,8:7:21.07:415,21,0	1/1:0,20:18:38.97:788,39,0	1/1:0,8:7:18.06:337,18,0	0/0:13,0:12:33.11:0,33,526	1/1:3,0:23:59.32:649,59,0	1/1:1,20:20:54.19:1088,54,0	1/1:0,0:4:6.02:72,6,0
chr10	87812137	.	GATTTAACCTTTCAAAACACTTT	G	1175.49	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.776;DP=490;FS=7.758;HRun=0;HaplotypeScore=264.2487;InbreedingCoeff=0.9093;MQ=70.78;MQ0=0;MQRankSum=-3.002;QD=90.42;ReadPosRankSum=-1.320;VQSLOD=2.0563;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:69.24:0,69,5388	0/0:6,0:6:18.06:0,18,1386	0/0:18,0:18:45.15:0,45,2978	0/0:17,0:16:38.18:0,38,2008	0/0:16,0:16:33.11:0,33,2880	0/0:21,0:21:57.20:0,57,4934	0/0:25,0:25:69.22:0,69,6021	0/0:47,0:47:99:0,129,10232	0/0:14,0:14:33.11:0,33,2825	0/0:15,0:15:45.15:0,45,3597	0/0:7,0:7:12.98:0,13,990	0/0:13,0:13:36.12:0,36,3113	0/0:13,0:13:39.09:0,39,3026	0/0:18,0:18:48.16:0,48,3922	0/0:26,0:26:75.26:0,75,6873	0/0:18,0:18:48.15:0,48,3804	0/0:17,0:17:45.13:0,45,2980	0/0:19,0:19:57.18:0,57,4857	0/0:14,0:14:39.13:0,39,2915	0/0:17,0:16:30.10:0,30,1406	0/0:24,0:24:69.24:0,69,6291	0/0:9,0:9:24.08:0,24,1677	0/0:7,0:7:12.51:0,13,829	0/0:22,0:22:60.16:0,60,5044	0/0:10,0:10:24.08:0,24,2235	1/1:1,8:9:24.04:1190,24,0	0/0:33,0:33:84.29:0,84,8178	1/1:4,0:4:6.02:96,6,0
chr10	87812198	.	G	GCA	340.86	PASS	AB=0.978;AC=7;AF=0.159;AN=44;BaseQRankSum=6.776;DP=324;FS=21.962;HRun=0;HaplotypeScore=70.0904;InbreedingCoeff=-0.1242;MQ=34.98;MQ0=6;MQRankSum=-5.490;QD=3.87;ReadPosRankSum=0.161;VQSLOD=0.5117;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:3.01:0,3,30	./.	0/0:2,0:1:3.01:0,3,47	0/0:7,0:2:6.01:0,6,75	./.	0/0:20,0:20:1.60:0,2,23	0/0:20,0:20:19.57:0,20,297	0/1:25,1:24:99:297,0,517	0/0:12,0:11:5.97:0,6,115	0/0:7,0:7:20.43:0,20,243	./.	0/0:16,0:16:7.57:0,8,118	0/0:15,0:15:9.28:0,9,78	0/0:10,0:10:10.07:0,10,104	0/0:18,0:18:3.01:0,3,46	0/1:15,0:15:10.19:10,0,118	0/1:11,0:11:16.16:16,0,61	0/0:11,0:11:33.06:0,33,398	0/1:16,0:13:75.43:75,0,328	./.	0/0:11,0:10:21.07:0,21,304	1/1:7,0:7:0.89:2,1,0	./.	0/0:12,0:12:6.01:0,6,59	0/0:11,0:11:5.95:0,6,67	0/1:12,1:13:46.59:47,0,276	0/0:17,1:18:25.77:0,26,213	./.
chr10	87812205	.	T	TA	54.62	PASS	AB=0.892;AC=4;AF=0.105;AN=38;BaseQRankSum=3.064;DP=270;FS=4.713;HRun=0;HaplotypeScore=64.4582;InbreedingCoeff=0.1758;MQ=33.60;MQ0=6;MQRankSum=-1.658;QD=1.44;ReadPosRankSum=0.584;VQSLOD=0.8040;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:2.99:0,3,24	./.	./.	./.	./.	0/0:17,2:19:5.95:0,6,57	0/0:16,1:17:11.98:0,12,127	0/1:18,3:19:80.59:81,0,489	0/0:8,1:8:3.01:0,3,42	0/0:5,0:5:12.40:0,12,138	./.	0/0:14,1:15:9.01:0,9,103	0/0:14,1:15:5.49:0,5,28	0/0:7,0:7:3.88:0,4,27	./.	0/0:12,2:14:8.51:0,9,93	1/1:5,2:7:6.66:52,7,0	0/0:10,0:10:24.07:0,24,289	0/0:14,0:12:32.99:0,33,379	./.	0/0:7,0:7:12.04:0,12,159	0/0:6,1:7:0:0,0,0	./.	0/0:10,0:10:5.84:0,6,34	0/0:9,1:10:5.95:0,6,82	0/1:9,1:10:18.62:19,0,259	0/0:13,0:13:14.23:0,14,136	./.
chr10	87812208	.	G	GCA	669.43	PASS	AB=0.966;AC=21;AF=0.457;AN=46;BaseQRankSum=2.945;DP=244;FS=11.688;HRun=0;HaplotypeScore=109.6519;InbreedingCoeff=0.1025;MQ=33.39;MQ0=4;MQRankSum=-3.454;QD=4.21;ReadPosRankSum=2.997;VQSLOD=1.2791;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,3:11:3.01:38,3,0	./.	./.	./.	./.	0/1:18,0:18:2.40:2,0,7	0/1:15,0:15:29.16:77,0,29	0/1:18,0:17:76.65:77,0,149	0/0:9,0:8:1.85:0,2,50	1/1:5,0:5:3.11:9,3,0	./.	0/1:12,1:13:0:0,0,28	1/1:12,2:14:8.80:114,9,0	0/0:7,0:7:2.03:0,2,5	0/0:14,0:14:2.04:0,2,6	0/1:14,0:14:28.95:29,0,68	1/1:5,0:5:1.25:3,1,0	0/1:8,2:10:15.78:102,0,16	0/1:13,0:11:20.41:24,0,20	0/0:8,0:8:3.81:0,4,30	0/0:6,0:6:9.03:0,9,131	0/0:7,0:7:1.54:0,2,14	0/0:5,0:5:2.90:0,3,16	0/0:10,0:10:5.70:0,6,31	0/0:10,0:10:5.95:0,6,67	1/1:7,2:9:10.71:142,11,0	1/1:6,6:12:8.84:182,9,0	1/1:2,0:2:0.89:2,1,0
chr10	87814437	.	ACACACACAT	A	467.66	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=8.868;DP=603;FS=27.498;HRun=0;HaplotypeScore=178.6254;InbreedingCoeff=0.3105;MQ=53.25;MQ0=16;MQRankSum=-5.705;QD=3.90;ReadPosRankSum=-0.660;VQSLOD=0.9894;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:32.43:0,32,537	0/0:5,0:4:9.01:0,9,160	0/0:34,0:8:17.59:0,18,227	0/1:36,0:4:1.96:2,0,43	0/0:15,0:14:26.44:0,26,929	0/1:21,0:21:11.66:12,0,171	0/0:27,0:26:28.73:0,29,469	0/0:23,0:23:57.19:0,57,1116	0/0:16,0:16:39.13:0,39,1089	0/0:20,0:20:40.03:0,40,776	0/0:16,0:16:11.76:0,12,153	0/0:34,0:33:12.11:0,12,192	0/1:15,0:15:1.13:1,0,128	0/0:31,0:31:24.32:0,24,485	0/0:31,0:30:84.29:0,84,2835	0/0:21,0:20:54.19:0,54,1959	0/0:23,0:23:25.30:0,25,456	0/0:18,0:15:1.27:0,1,227	0/1:21,0:21:1.39:1,0,709	0/0:11,0:11:27.08:0,27,430	0/0:63,0:63:99:0,158,4824	0/0:18,0:18:16:0,16,284	0/0:5,0:5:3.01:0,3,48	0/0:25,0:22:9.92:0,10,142	0/0:11,0:11:33.11:0,33,1086	1/1:3,9:12:27.09:464,27,0	0/1:10,0:9:31.71:32,0,206	1/1:5,0:5:6.02:83,6,0
chr10	87814446	.	TCACACA	T	1788.15	PASS	AB=0.836;AC=31;AF=0.646;AN=48;BaseQRankSum=8.622;DP=611;FS=25.577;HRun=0;HaplotypeScore=150.7419;InbreedingCoeff=0.6330;MQ=51.77;MQ0=21;MQRankSum=-7.520;QD=5.18;ReadPosRankSum=-0.422;VQSLOD=0.4861;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,17:36:0.73:1,1,0	1/1:7,0:5:5.85:62,6,0	./.	./.	0/0:16,0:15:20.56:0,21,550	1/1:19,0:19:17.65:218,18,0	1/1:26,0:25:3.87:44,4,0	0/0:24,0:24:18.53:0,19,386	0/0:15,0:15:15.05:0,15,484	1/1:14,4:18:9.02:148,9,0	0/1:7,5:16:0.41:0,0,1	1/1:33,0:32:2.83:42,3,0	1/1:14,0:14:15.05:208,15,0	1/1:33,0:33:23.76:285,24,0	0/0:25,0:29:54.18:0,54,1508	0/0:18,0:20:48.16:0,48,1330	1/1:15,10:26:21.07:392,21,0	1/1:18,0:15:23.55:284,24,0	1/1:16,0:18:6.02:84,6,0	0/1:11,0:12:0.02:0,0,0	0/0:66,0:67:99:0,107,2605	1/1:17,0:17:3.37:43,3,0	./.	1/1:26,0:23:0.20:0,0,0	0/0:10,0:11:24.04:0,24,533	0/1:13,0:13:56.19:56,0,108	1/1:7,0:11:2.21:83,2,0	./.
chr10	87814450	.	ACACACAC	A	2992.12	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=10.577;DP=631;FS=1.020;HRun=0;HaplotypeScore=156.8269;InbreedingCoeff=0.6600;MQ=51.43;MQ0=22;MQRankSum=-3.835;QD=11.87;ReadPosRankSum=2.562;VQSLOD=2.5800;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:29.72:0,30,378	0/1:7,0:5:0.35:0,0,87	0/0:36,0:7:17.40:0,17,203	0/0:41,0:3:5.61:0,6,49	0/0:15,0:14:26.45:0,26,843	1/1:1,12:20:30.17:526,30,0	1/1:3,3:24:29.66:302,30,0	0/0:24,0:24:64.09:0,64,1185	0/0:16,0:16:39.13:0,39,968	0/0:17,0:17:24.78:0,25,541	0/0:16,0:16:11.90:0,12,130	1/1:29,0:34:14.36:173,14,0	1/1:0,11:12:18.04:426,18,0	1/1:4,19:34:42.89:722,43,0	0/0:33,0:32:93.31:0,93,2692	0/0:21,0:20:60.20:0,60,1981	0/1:26,0:26:23.97:24,0,271	1/1:0,9:14:33.06:647,33,0	0/1:13,0:13:33.86:34,0,381	0/0:13,0:12:26.95:0,27,343	0/0:78,0:77:99:0,198,5287	1/1:0,10:17:21.03:222,21,0	1/1:0,5:6:2.94:23,3,0	1/1:3,10:23:7.04:50,7,0	0/0:12,0:12:36.12:0,36,992	0/0:19,0:19:38.56:0,39,848	0/1:13,0:12:45.47:45,0,162	0/0:4,0:4:9.02:0,9,139
chr10	87814451	.	CACACACA	C	2984.23	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=10.657;DP=633;FS=1.006;HRun=0;HaplotypeScore=157.4732;InbreedingCoeff=0.6553;MQ=51.47;MQ0=22;MQRankSum=-2.945;QD=11.94;ReadPosRankSum=2.332;VQSLOD=2.9143;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:26.72:0,27,353	0/1:6,0:4:0.35:0,0,87	0/0:36,0:7:17.39:0,17,191	0/0:39,0:3:2.97:0,3,38	0/0:16,0:15:26.45:0,26,848	1/1:20,0:20:29.32:525,29,0	1/1:25,0:24:29.65:302,30,0	0/0:25,0:25:67.10:0,67,1292	0/0:17,0:17:42.11:0,42,1000	0/0:17,0:17:24.90:0,25,541	0/0:16,0:16:11.90:0,12,130	1/1:10,26:34:14.36:167,14,0	1/1:12,0:12:18.04:426,18,0	1/1:32,0:32:42.89:721,43,0	0/0:33,0:32:93.31:0,93,2693	0/0:22,0:21:63.21:0,63,2052	0/1:25,0:26:23.97:24,0,271	1/1:17,0:14:33.06:647,33,0	0/1:14,0:14:32:32,0,384	0/0:13,0:12:26.95:0,27,344	0/0:79,0:78:99:0,201,5330	1/1:17,0:17:21.03:222,21,0	1/1:6,0:6:2.94:23,3,0	1/1:25,0:23:7.04:50,7,0	0/0:12,0:12:36.12:0,36,994	0/0:19,0:19:39.27:0,39,872	0/1:13,0:12:45.51:46,0,161	0/0:5,0:5:12.04:0,12,194
chr10	87815124	.	C	CT	2185.06	PASS	AB=0.834;AC=21;AF=0.375;AN=56;BaseQRankSum=-1.383;DP=648;FS=0.813;HRun=14;HaplotypeScore=91.3704;InbreedingCoeff=0.6159;MQ=65.24;MQ0=9;MQRankSum=-1.476;QD=7.97;ReadPosRankSum=-0.251;VQSLOD=2.8395;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,13:26:19.76:385,20,0	0/0:4,0:6:7:0,7,31	0/1:24,0:11:13.74:14,0,23	0/0:22,0:15:14.92:0,15,82	0/0:21,0:20:23.85:0,24,220	1/1:9,10:18:24.62:304,25,0	1/1:6,16:22:22.31:291,22,0	0/0:40,1:42:38.46:0,38,364	0/0:15,0:15:30.34:0,30,182	0/0:7,0:23:37.56:0,38,140	0/0:8,0:16:11.65:0,12,37	1/1:17,7:24:19:221,19,0	0/1:5,8:14:14.76:55,0,15	1/1:17,5:22:11.07:210,11,0	0/0:26,0:26:62.35:0,62,398	0/0:28,1:31:12.82:0,13,259	0/0:11,0:27:40.31:0,40,150	0/1:8,12:20:2.54:228,0,3	0/0:26,0:27:29.53:0,30,242	0/1:20,1:21:25.28:25,0,127	0/0:18,0:19:43.23:0,43,268	1/1:6,15:20:36.32:299,36,0	1/1:11,7:19:13.45:217,13,0	1/1:7,12:19:2.14:131,2,0	0/1:20,1:22:0.92:1,0,228	0/0:31,1:36:25.98:0,26,255	0/0:24,0:27:46.59:0,47,287	0/0:27,2:28:12.30:0,12,321
chr10	87815884	.	C	CT	912.49	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.666;DP=620;FS=1.631;HRun=4;HaplotypeScore=66.1400;InbreedingCoeff=0.9974;MQ=79.23;MQ0=0;MQRankSum=-4.024;QD=32.59;ReadPosRankSum=2.676;VQSLOD=4.3949;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1236	0/0:17,0:17:45.11:0,45,501	0/0:29,0:29:78.15:0,78,834	0/0:25,0:25:59.81:0,60,623	0/0:26,0:26:72.19:0,72,806	0/0:24,0:24:66.18:0,66,740	0/0:26,0:26:69.18:0,69,773	0/0:48,0:47:99:0,114,1271	0/0:14,0:14:39.11:0,39,442	0/0:25,0:25:66.16:0,66,730	0/0:13,0:13:39.10:0,39,434	0/0:13,0:13:39.08:0,39,423	0/0:22,0:22:66.17:0,66,738	0/0:16,0:16:48.11:0,48,525	0/0:24,0:24:66.19:0,66,749	0/0:26,0:26:72.16:0,72,789	0/0:24,0:24:66.16:0,66,736	0/0:20,0:20:54.12:0,54,593	0/0:20,0:20:60.15:0,60,665	0/0:16,0:16:45.11:0,45,497	0/0:41,0:41:99:0,120,1320	0/0:19,0:19:51.13:0,51,569	0/0:17,0:17:45.13:0,45,510	0/0:18,0:18:51.07:0,51,542	0/0:15,0:15:42.12:0,42,476	1/1:2,18:20:23.15:705,23,0	0/0:15,0:15:36.10:0,36,408	1/1:0,8:8:24.08:328,24,0
chr10	87817109	.	G	GAGACAAC	18407.32	PASS	AB=0.583;AC=27;AF=0.500;AN=54;BaseQRankSum=-10.212;DP=507;FS=30.456;HRun=0;HaplotypeScore=114.2402;InbreedingCoeff=0.9088;MQ=93.82;MQ0=1;MQRankSum=-17.289;QD=93.91;ReadPosRankSum=2.475;VQSLOD=3.1856;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:25:51.16:2129,51,0	0/0:9,0:9:24.08:0,24,602	0/0:28,0:28:81.28:0,81,2118	0/0:27,0:27:78.17:0,78,1797	0/0:18,0:18:48.15:0,48,1167	1/1:3,10:15:33.11:1305,33,0	1/1:6,18:25:63.22:2524,63,0	0/0:17,0:17:48.15:0,48,1134	0/0:22,0:22:66.21:0,66,1716	0/0:18,0:18:54.19:0,54,1400	0/0:21,0:21:60.18:0,60,1447	1/1:1,17:19:54.19:2176,54,0	1/1:0,13:16:38.87:1574,39,0	1/1:1,8:9:24.08:926,24,0	0/0:29,0:29:84.29:0,84,2244	0/0:43,0:43:99:0,126,3369	0/0:23,0:23:66.18:0,66,1743	1/1:1,8:11:27.09:1129,27,0	1/1:1,5:7:21.07:871,21,0	1/1:0,2:3:6.02:179,6,0	0/0:38,0:37:99:0,105,2890	1/1:1,13:16:39.13:1627,39,0	1/1:4,9:13:33.11:1006,33,0	1/1:3,9:15:18.95:736,19,0	0/0:17,0:17:48.16:0,48,1342	0/1:2,5:7:99:606,0,124	1/1:0,13:13:39.13:1619,39,0	./.
chr10	87817305	.	A	AGGTGGT	1818.56	PASS	AB=1.000;AC=31;AF=0.620;AN=50;BaseQRankSum=5.166;DP=473;FS=3.637;HRun=0;HaplotypeScore=130.8767;InbreedingCoeff=0.7320;MQ=46.73;MQ0=10;MQRankSum=-4.591;QD=8.70;ReadPosRankSum=-2.341;VQSLOD=2.3930;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:9.03:115,9,0	1/1:9,0:9:6:90,6,0	0/0:27,0:14:19.64:0,20,374	0/0:28,0:7:8.99:0,9,150	0/0:6,0:5:6.02:0,6,129	1/1:9,0:6:3.01:43,3,0	1/1:20,0:18:21.19:227,21,0	0/0:16,0:16:18.04:0,18,289	0/0:22,0:22:45.13:0,45,892	1/1:16,13:26:21.03:524,21,0	./.	0/1:13,0:9:11.76:26,0,12	1/1:9,0:9:14.56:114,15,0	1/1:13,0:12:11.93:151,12,0	0/0:17,0:17:30.03:0,30,596	0/0:22,0:22:56.90:0,57,1131	1/1:4,10:16:6.02:178,6,0	1/1:8,0:7:11.97:133,12,0	1/1:17,0:13:11.88:102,12,0	1/1:14,0:14:11.93:125,12,0	0/0:97,0:96:99:0,186,3432	1/1:9,0:9:3.41:19,3,0	1/1:9,0:9:5.94:41,6,0	1/1:19,0:19:14.77:100,15,0	0/0:21,0:21:42.13:0,42,738	./.	1/1:4,0:4:3.83:20,4,0	./.
chr10	87817320	.	TGAG	T	718.99	PASS	AB=0.888;AC=17;AF=0.327;AN=52;BaseQRankSum=6.988;DP=465;FS=8.432;HRun=0;HaplotypeScore=89.5110;InbreedingCoeff=-0.2434;MQ=44.61;MQ0=14;MQRankSum=-5.855;QD=3.74;ReadPosRankSum=-1.073;VQSLOD=1.1516;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,1:12:28.67:29,0,250	0/1:4,3:7:40.60:41,0,90	0/0:29,0:12:8.72:0,9,407	0/0:27,0:5:3.09:0,3,203	0/0:4,0:4:6.02:0,6,137	0/1:11,0:9:30.02:35,0,30	0/1:23,1:24:79.44:79,0,428	0/0:12,0:12:30.09:0,30,588	0/0:19,0:19:49.70:0,50,1012	0/1:20,0:18:88.41:88,0,210	0/0:7,0:7:3.01:0,3,51	0/1:9,1:7:52.89:53,0,133	1/1:9,1:10:18.39:155,18,0	0/1:14,0:12:51.53:52,0,159	0/0:18,0:18:38.80:0,39,758	0/0:26,0:26:75.08:0,75,1564	0/1:17,1:17:65.38:65,0,71	0/1:5,1:6:65.20:65,0,124	0/0:15,0:7:17.95:0,18,235	1/1:10,0:10:0.89:110,1,0	0/0:97,0:95:99:0,244,5037	0/1:4,1:5:29.07:29,0,45	0/1:3,5:8:24.67:25,0,90	0/1:25,2:25:21.42:21,0,359	0/0:18,0:17:45.15:0,45,916	./.	0/1:5,1:6:27.04:27,0,83	./.
chr10	87817383	.	T	TGGTGATGGTGGA	4293.41	PASS	AB=0.778;AC=25;AF=0.481;AN=52;BaseQRankSum=3.695;DP=596;FS=11.080;HRun=0;HaplotypeScore=192.5480;InbreedingCoeff=0.7820;MQ=44.54;MQ0=37;MQRankSum=-4.147;QD=19.79;ReadPosRankSum=-0.087;VQSLOD=2.8142;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:22:3.28:186,3,0	0/0:8,0:8:17.88:0,18,410	0/0:28,0:12:23.64:0,24,205	0/0:46,0:13:24.89:0,25,277	0/0:12,0:12:27.03:0,27,633	1/1:12,0:10:18.06:253,18,0	1/1:31,0:31:45:811,45,0	0/0:31,0:27:57.14:0,57,889	0/0:20,0:20:33.02:0,33,526	0/0:16,0:12:18.01:0,18,430	0/0:10,0:9:12.03:0,12,289	1/1:19,0:17:12.58:562,13,0	1/1:1,6:10:3.01:179,3,0	1/1:21,0:21:38.97:968,39,0	0/0:21,0:21:54.15:0,54,1193	0/0:34,0:34:62.53:0,63,1844	0/0:24,0:24:48.14:0,48,1265	0/1:5,0:7:40.93:205,0,41	1/1:17,2:9:6:202,6,0	1/1:7,0:6:5.95:69,6,0	0/0:116,0:112:99:0,201,4470	1/1:10,0:7:5.94:67,6,0	1/1:9,0:7:6.48:61,6,0	1/1:25,0:21:26.60:350,27,0	0/0:10,0:9:16.28:0,16,428	./.	1/1:4,9:16:6.90:381,7,0	./.
chr10	87817413	.	TGAG	T	109.28	PASS	AB=0.990;AC=8;AF=0.154;AN=52;BaseQRankSum=7.026;DP=495;FS=14.830;HRun=0;HaplotypeScore=89.6525;InbreedingCoeff=-0.0169;MQ=46.76;MQ0=12;MQRankSum=-5.311;QD=1.03;ReadPosRankSum=-3.283;VQSLOD=0.0123;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,1:12:31.54:32,0,264	0/0:5,0:5:15.05:0,15,342	0/0:15,0:5:14.60:0,15,187	0/0:24,0:7:6.55:0,7,343	0/0:12,0:12:33.11:0,33,756	0/0:17,0:13:24.06:0,24,506	0/0:33,2:34:55.31:0,55,1516	0/0:20,0:19:57.20:0,57,1335	0/0:18,0:18:39.13:0,39,850	0/0:12,1:13:18.16:0,18,705	0/0:4,0:4:12.04:0,12,258	0/1:29,0:27:90.63:91,0,891	0/1:15,0:15:29:29,0,261	0/1:28,0:27:61.38:61,0,761	0/0:25,0:24:60.20:0,60,1289	0/0:32,0:32:73.14:0,73,1784	0/0:26,0:26:66.19:0,66,1538	0/1:8,0:8:4.74:5,0,261	0/0:13,0:8:16.38:0,16,328	0/0:6,0:5:2.99:0,3,24	0/0:89,0:86:99:0,200,4433	0/0:5,0:4:9.01:0,9,211	1/1:2,0:2:1.55:4,2,0	0/0:17,1:15:17.42:0,17,386	0/0:10,0:9:21.07:0,21,461	./.	0/1:8,0:8:1.48:1,0,194	./.
chr10	87817500	.	TGGTGAG	T	816.58	PASS	AB=0.952;AC=14;AF=0.280;AN=50;BaseQRankSum=7.900;DP=525;FS=15.302;HRun=0;HaplotypeScore=110.1964;InbreedingCoeff=0.1717;MQ=44.07;MQ0=27;MQRankSum=-4.271;QD=4.06;ReadPosRankSum=-1.126;VQSLOD=0.8603;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,7:13:23.57:357,24,0	0/0:4,0:3:3:0,3,58	0/0:19,0:1:3.01:0,3,43	0/0:16,0:1:3.01:0,3,79	0/0:4,0:3:8.06:0,8,180	0/0:19,0:14:2.96:0,3,389	0/1:44,0:41:37.82:38,0,1003	0/0:23,0:16:42.14:0,42,1017	0/0:26,0:26:69.23:0,69,1826	0/0:7,0:3:5.96:0,6,50	0/0:6,0:4:6.02:0,6,120	0/0:30,0:27:12.43:0,12,773	0/1:24,0:23:59.28:59,0,523	0/1:26,0:25:67.82:68,0,618	0/0:24,0:24:29.33:0,29,1081	0/0:29,0:28:57:0,57,2053	0/1:23,0:23:65.70:66,0,968	0/0:11,0:11:5.26:0,5,274	0/1:6,4:5:65.10:181,0,65	1/1:1,2:3:2.94:70,3,0	0/0:96,0:87:99:0,174,5001	1/1:8,0:4:3.27:13,3,0	./.	0/1:42,0:38:0.75:1,0,217	0/0:7,0:4:9.03:0,9,317	./.	1/1:2,1:3:6.02:110,6,0	./.
chr10	87817503	.	TGAG	T	1262.84	PASS	AB=0.849;AC=16;AF=0.320;AN=50;BaseQRankSum=7.947;DP=510;FS=17.290;HRun=0;HaplotypeScore=87.9496;InbreedingCoeff=-0.0791;MQ=44.81;MQ0=23;MQRankSum=-5.367;QD=4.95;ReadPosRankSum=-0.562;VQSLOD=0.9429;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,1:12:22.72:213,23,0	0/0:3,0:3:3.01:0,3,57	0/0:20,0:1:2.92:0,3,17	0/0:15,0:2:2.60:0,3,70	0/0:4,0:3:8.06:0,8,147	0/1:11,8:15:34.76:35,0,291	0/1:35,6:39:99:161,0,858	0/0:25,0:19:51.17:0,51,980	0/0:25,0:25:66.22:0,66,1380	0/0:6,0:3:3.48:0,3,32	0/0:6,0:4:6.02:0,6,120	0/1:27,2:27:38.78:39,0,594	0/1:18,5:22:99:228,0,455	0/1:22,4:25:99:237,0,485	0/0:21,1:22:29.33:0,29,789	0/0:28,0:28:61.79:0,62,1487	0/1:24,2:26:99:110,0,821	0/1:11,0:11:8.06:8,0,259	0/1:9,1:5:55.04:138,0,55	1/1:2,1:3:2.93:27,3,0	0/0:92,0:85:99:0,180,3826	0/1:7,2:5:41.53:42,0,45	./.	0/1:17,22:36:99:111,0,201	0/0:6,0:5:12.03:0,12,237	./.	1/1:1,1:2:6.01:67,6,0	./.
chr10	87818670	.	GTATT	G	2527.14	PASS	AB=0.947;AC=19;AF=0.352;AN=54;BaseQRankSum=8.369;DP=590;FS=0.963;HRun=0;HaplotypeScore=132.3872;InbreedingCoeff=0.8021;MQ=54.56;MQ0=1;MQRankSum=0.524;QD=12.51;ReadPosRankSum=1.464;VQSLOD=3.1920;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:41:18.04:0,18,308	0/0:13,0:13:26.93:0,27,271	0/0:7,0:6:5.80:0,6,42	0/0:5,0:3:2.17:0,2,48	0/0:29,0:29:75.15:0,75,1300	1/1:15,8:23:41.93:450,42,0	1/1:18,1:19:26.94:243,27,0	0/0:50,0:50:99:0,102,924	0/0:21,0:21:51.06:0,51,828	0/0:19,0:19:44.98:0,45,551	0/0:12,0:12:17.98:0,18,209	1/1:6,6:12:3.01:50,3,0	1/1:7,15:22:17.85:300,18,0	1/1:17,3:20:32.65:301,33,0	0/0:18,0:18:12.03:0,12,538	0/0:29,0:29:66.12:0,66,1063	0/0:19,0:19:35.92:0,36,403	1/1:17,0:17:26.69:190,27,0	0/0:3,0:13:27.52:0,28,404	0/0:2,0:22:32.97:0,33,358	0/0:18,0:18:42.09:0,42,730	1/1:18,5:23:31.60:303,32,0	1/1:4,10:14:2.35:49,2,0	./.	0/0:21,0:21:30.78:0,31,722	1/1:27,7:34:51.02:608,51,0	0/0:2,0:25:12.03:0,12,174	0/1:17,1:18:16.20:232,0,16
chr10	87819905	.	CT	C	3699.62	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=11.900;DP=525;FS=5.172;HRun=10;HaplotypeScore=55.4375;InbreedingCoeff=0.9579;MQ=68.83;MQ0=0;MQRankSum=-1.251;QD=19.57;ReadPosRankSum=2.174;VQSLOD=4.6365;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:81.22:0,81,895	0/0:10,0:10:30.08:0,30,331	0/0:9,0:7:10.83:0,11,71	0/0:15,0:11:0.53:0,1,106	0/0:18,0:20:53.80:0,54,550	1/1:3,17:20:47.99:417,48,0	1/1:3,14:17:35.99:313,36,0	0/0:41,0:41:93.24:0,93,1021	0/0:14,0:14:42.09:0,42,453	0/0:16,0:16:39.11:0,39,431	0/0:26,0:26:63.15:0,63,685	1/1:5,12:17:32.99:286,33,0	1/1:0,17:17:47.99:417,48,0	1/1:3,14:17:35.98:313,36,0	0/0:21,0:21:54.15:0,54,597	0/0:17,0:17:51.12:0,51,555	0/0:17,1:18:22.07:0,22,471	1/1:3,20:24:56.02:475,56,0	0/0:13,0:15:41.75:0,42,409	0/0:34,0:34:81.18:0,81,883	0/0:11,0:11:30.08:0,30,331	1/1:3,13:16:35.99:313,36,0	1/1:6,13:19:32.99:287,33,0	1/1:3,12:15:32.99:286,33,0	0/0:24,0:24:57.15:0,57,631	1/1:4,16:20:47.96:412,48,0	0/0:11,0:11:27.06:0,27,290	1/1:0,7:7:21:182,21,0
chr10	87820152	.	CCG	C	2467.47	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-0.880;DP=512;FS=43.866;HRun=0;HaplotypeScore=85.9216;InbreedingCoeff=0.9090;MQ=81.95;MQ0=2;MQRankSum=-1.047;QD=14.10;ReadPosRankSum=-7.721;VQSLOD=0.6535;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:77.94:0,78,679	0/0:10,0:10:11.99:0,12,106	0/0:22,0:20:43.80:0,44,455	0/1:19,0:18:18.87:19,0,282	0/0:15,0:15:38.91:0,39,592	1/1:14,2:16:36.37:315,36,0	1/1:18,4:22:45.36:383,45,0	0/0:27,0:26:65.95:0,66,981	0/0:15,0:15:42.09:0,42,679	0/0:12,0:12:32.81:0,33,274	0/0:9,0:9:14.94:0,15,121	1/1:18,2:20:28.13:323,28,0	1/1:10,2:12:24.89:192,25,0	1/1:7,1:8:14.68:134,15,0	0/0:26,0:26:77.99:0,78,1255	0/0:15,0:15:45.11:0,45,730	0/0:21,0:21:12.31:0,12,313	1/1:18,1:19:15.87:256,16,0	0/0:19,0:19:47.93:0,48,418	0/0:21,0:21:62.91:0,63,549	0/0:49,0:49:99:0,147,2318	1/1:13,1:14:29.66:280,30,0	1/1:8,1:9:16.18:145,16,0	1/1:10,2:12:26.98:253,27,0	0/0:27,0:27:78.25:0,78,1289	1/1:14,0:14:29.42:205,29,0	0/0:21,0:21:54.03:0,54,497	1/1:7,2:9:20.31:185,20,0
chr10	87820153	.	CG	C	2992.01	PASS	AB=0.952;AC=23;AF=0.411;AN=56;BaseQRankSum=-2.784;DP=511;FS=51.409;HRun=1;HaplotypeScore=75.1920;InbreedingCoeff=0.9186;MQ=81.24;MQ0=2;MQRankSum=-1.790;QD=16.90;ReadPosRankSum=-7.869;VQSLOD=-0.0951;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:73.22:0,73,413	0/0:9,0:9:11.31:0,11,55	0/0:22,0:19:37.63:0,38,373	0/1:19,1:18:2.13:2,0,188	0/0:15,0:15:38.91:0,39,470	1/1:14,1:15:38.88:317,39,0	1/1:16,6:22:47.67:454,48,0	0/0:26,0:25:68.94:0,69,801	0/0:14,0:14:42.09:0,42,534	0/0:11,0:11:31.40:0,31,167	0/0:9,0:9:14.54:0,15,95	1/1:17,3:20:48.67:385,49,0	1/1:13,0:13:26.98:247,27,0	1/1:7,1:8:14.99:141,15,0	0/0:26,0:26:72.06:0,72,973	0/0:15,0:15:45.10:0,45,574	0/0:20,0:20:3.01:0,3,150	1/1:16,2:18:31.71:405,32,0	0/0:18,0:18:45.12:0,45,247	0/0:21,0:21:60.42:0,60,327	0/0:52,0:52:99:0,156,1900	1/1:13,2:15:32.94:289,33,0	1/1:9,2:11:20.91:170,21,0	1/1:9,4:13:32.24:318,32,0	0/0:26,0:26:78.12:0,78,1006	1/1:0,13:13:29.78:248,30,0	0/0:21,0:21:51.66:0,52,274	1/1:8,1:9:26.96:237,27,0
chr10	87820154	.	G	GC	2676.53	PASS	AB=0.987;AC=22;AF=0.393;AN=56;BaseQRankSum=-4.523;DP=515;FS=0.912;HRun=8;HaplotypeScore=78.8160;InbreedingCoeff=0.6307;MQ=78.14;MQ0=2;MQRankSum=-0.830;QD=12.00;ReadPosRankSum=0.671;VQSLOD=2.9915;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,25:31:63.19:727,63,0	1/1:0,1:9:11.53:78,12,0	0/0:20,0:17:14.86:0,15,95	0/0:17,0:16:9.91:0,10,95	0/0:15,0:15:39.01:0,39,356	0/0:14,0:14:1.70:0,2,5	0/0:21,0:22:18.39:0,18,54	0/0:25,0:24:47.99:0,48,436	0/0:14,0:14:39.02:0,39,357	1/1:2,3:13:28.79:175,29,0	1/1:4,1:10:5.68:29,6,0	0/1:19,0:19:8.92:9,0,24	0/0:14,0:14:1.44:0,1,4	0/0:8,0:8:3.36:0,3,9	0/0:25,0:26:74.08:0,74,665	0/0:15,0:15:45.02:0,45,412	1/1:3,0:19:36.92:194,37,0	0/1:17,0:18:2.98:3,0,17	1/1:6,13:19:17.98:407,18,0	1/1:4,18:22:54.16:623,54,0	0/0:52,0:52:99:0,141,1276	0/0:14,0:14:5.11:0,5,14	0/1:12,0:12:0.39:20,0,0	0/1:13,0:13:5.85:6,0,15	0/0:25,1:26:43.43:0,43,652	1/1:15,0:15:1.25:3,1,0	1/1:4,18:23:53.98:591,54,0	0/0:9,0:9:5.47:0,5,15
chr10	87821675	.	CA	C	2257.99	PASS	AB=0.809;AC=22;AF=0.393;AN=56;BaseQRankSum=-1.017;DP=471;FS=0.909;HRun=12;HaplotypeScore=66.2338;InbreedingCoeff=0.7439;MQ=71.56;MQ0=0;MQRankSum=-0.561;QD=11.01;ReadPosRankSum=4.526;VQSLOD=3.3010;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:33:43.39:0,43,237	0/0:0,0:4:5.80:0,6,34	0/1:12,0:9:16.73:17,0,48	0/1:12,0:9:4.03:4,0,77	0/0:11,0:11:20.16:0,20,183	1/1:3,14:18:40.87:308,41,0	0/1:4,9:14:1.51:163,0,2	0/0:34,1:35:40.37:0,40,560	0/0:20,0:23:47.88:0,48,405	0/0:8,0:23:47.76:0,48,279	0/0:5,0:10:16.44:0,16,100	1/1:2,9:12:16.96:122,17,0	1/1:4,11:15:9.86:209,10,0	0/1:8,9:17:0.62:179,0,1	0/0:15,0:17:15.77:0,16,315	0/0:18,0:18:38.71:0,39,354	0/0:0,0:23:34.22:0,34,178	1/1:6,20:27:37.34:463,37,0	0/0:6,0:14:19.53:0,20,115	0/0:5,0:13:18.92:0,19,112	0/0:13,0:13:14.99:0,15,137	1/1:3,12:15:12.82:232,13,0	1/1:4,5:10:13.98:99,14,0	1/1:3,10:13:20.87:159,21,0	0/0:8,0:8:21.04:0,21,213	1/1:7,17:26:15.40:349,15,0	0/0:8,0:21:11.54:0,12,64	1/1:6,8:14:20.86:162,21,0
chr10	87823387	.	CTGTGTGTGTGTG	C	9438.97	PASS	AB=0.713;AC=32;AF=0.571;AN=56;BaseQRankSum=12.969;DP=806;FS=4.883;HRun=0;HaplotypeScore=275.1616;InbreedingCoeff=0.4491;MQ=58.76;MQ0=13;MQRankSum=-12.197;QD=18.88;ReadPosRankSum=0.718;VQSLOD=3.0972;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:43:23.91:590,24,0	0/1:3,0:4:5.74:78,0,6	0/0:22,0:16:6:0,6,52	0/0:21,0:16:6.02:0,6,101	0/0:21,0:21:26.75:0,27,824	0/1:7,11:21:50.45:441,0,50	0/1:19,11:30:87.90:271,0,88	0/0:29,0:28:42.13:0,42,991	0/0:22,0:27:47.41:0,47,1737	0/1:16,0:34:41.60:533,0,42	1/1:5,0:11:6.02:167,6,0	1/1:11,41:56:37.74:1717,38,0	1/1:9,15:27:32.71:1080,33,0	1/1:17,14:34:50.76:1499,51,0	0/0:39,0:42:90.31:0,90,4081	0/0:43,0:47:99:0,105,4352	1/1:9,1:28:3.01:84,3,0	1/1:7,11:19:18.06:484,18,0	1/1:17,0:25:9.50:218,10,0	1/1:3,0:14:12.04:335,12,0	0/0:64,0:69:99:0,112,4559	1/1:7,9:16:2.68:59,3,0	1/1:6,8:15:3.01:84,3,0	1/1:23,30:53:18.48:625,18,0	0/0:20,0:23:33.10:0,33,970	0/1:17,1:35:67.42:517,0,67	1/1:4,0:16:21.06:586,21,0	0/1:9,0:11:71.55:72,0,178
chr10	87823680	.	G	GGT	2496.78	PASS	AB=0.858;AC=32;AF=0.615;AN=52;BaseQRankSum=0.737;DP=817;FS=10.050;HRun=0;HaplotypeScore=148.6433;InbreedingCoeff=0.2634;MQ=63.37;MQ0=9;MQRankSum=0.313;QD=4.20;ReadPosRankSum=-0.940;VQSLOD=2.3202;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,1:38:5.55:34,6,0	./.	0/1:24,0:14:0:0,0,0	./.	0/0:19,0:19:8.84:0,9,71	1/1:10,6:16:9.03:134,9,0	0/1:26,11:41:87.13:236,0,87	0/0:31,0:31:4.57:0,5,55	0/0:38,0:39:26.73:0,27,256	1/1:29,0:29:21.25:184,21,0	1/1:10,0:10:5.99:48,6,0	0/1:28,6:40:98.95:154,0,99	0/1:24,3:28:34.82:67,0,35	1/1:24,8:35:27.97:385,28,0	0/0:32,0:34:35.49:0,35,335	0/0:32,0:34:29.74:0,30,289	1/1:12,0:13:7.25:58,7,0	0/1:16,9:25:34.31:161,0,34	1/1:22,0:21:5.96:44,6,0	1/1:20,0:18:11.80:98,12,0	0/1:92,1:97:9.17:9,0,252	1/1:11,2:14:3.01:45,3,0	0/0:22,0:22:5.88:0,6,61	0/1:34,16:55:49.71:513,0,50	0/1:26,0:26:18.75:20,0,19	1/1:18,2:26:27.76:257,28,0	1/1:12,0:16:11.86:90,12,0	1/1:12,2:18:12.02:132,12,0
chr10	87824409	.	CCT	C	6950.12	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.489;DP=733;FS=3.216;HRun=0;HaplotypeScore=96.0259;InbreedingCoeff=0.9971;MQ=90.01;MQ0=2;MQRankSum=-6.023;QD=35.28;ReadPosRankSum=3.964;VQSLOD=7.1998;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,40:42:99:1512,108,0	1/1:0,11:11:27.09:378,27,0	0/0:33,0:33:51.50:0,51,1309	0/0:40,0:39:61.05:0,61,1452	0/0:23,0:23:63.20:0,63,1092	0/0:19,0:19:54.18:0,54,963	0/0:28,0:28:78.27:0,78,1403	0/0:38,0:38:99:0,102,1820	0/0:24,0:24:72.25:0,72,1286	1/1:3,24:27:72.24:1008,72,0	1/1:2,17:19:42.10:566,42,0	0/0:18,0:18:51.17:0,51,917	0/0:22,0:22:63.22:0,63,1128	0/0:28,0:28:75.24:0,75,1304	0/0:35,0:35:99:0,102,1818	0/0:39,0:39:99:0,117,2065	1/1:1,35:36:87.29:1219,87,0	0/0:26,0:26:72.25:0,72,1289	1/1:1,12:13:36.12:502,36,0	1/1:0,19:19:54.18:756,54,0	0/0:38,0:38:96.31:0,96,1651	0/0:18,0:18:51.17:0,51,888	0/0:12,0:12:36.12:0,36,648	0/0:42,0:42:99:0,109,1854	0/0:19,0:19:57.19:0,57,1004	0/0:28,1:29:45.28:0,45,1439	1/1:2,28:28:72.24:1008,72,0	0/0:5,0:5:15.05:0,15,270
chr10	87825605	.	GA	G	7627.25	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.525;DP=621;FS=1.779;HRun=1;HaplotypeScore=82.9564;InbreedingCoeff=0.9989;MQ=86.45;MQ0=0;MQRankSum=-1.347;QD=35.15;ReadPosRankSum=3.855;VQSLOD=5.0343;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,2219	0/0:7,0:7:21.07:0,21,336	0/0:25,0:25:71.83:0,72,1100	0/0:16,0:16:45.10:0,45,659	0/0:10,0:10:27.09:0,27,405	1/1:0,18:18:45.15:584,45,0	1/1:2,36:38:93.30:1206,93,0	0/0:35,0:35:99:0,102,1609	0/0:22,0:22:66.23:0,66,1055	0/0:23,0:23:69.23:0,69,1083	0/0:19,0:19:51.16:0,51,788	1/1:1,21:22:63.20:818,63,0	1/1:0,18:18:48.16:621,48,0	1/1:0,20:20:54.18:700,54,0	0/0:37,0:37:99:0,111,1770	0/0:30,0:29:90.31:0,90,1438	0/0:16,0:16:48.16:0,48,767	1/1:0,10:10:27.09:351,27,0	0/0:27,0:27:81.26:0,81,1272	0/0:14,0:14:42.14:0,42,669	0/0:29,0:29:87.30:0,87,1381	1/1:0,20:20:57.19:738,57,0	1/1:0,12:12:36.12:467,36,0	1/1:0,21:21:63.20:818,63,0	0/0:17,0:17:45.15:0,45,717	1/1:1,25:26:27.22:858,27,0	0/0:29,0:29:87.30:0,87,1390	1/1:0,12:12:36.12:467,36,0
chr10	87826282	.	CT	C	2083.91	PASS	AB=0.785;AC=22;AF=0.393;AN=56;BaseQRankSum=2.227;DP=607;FS=0.398;HRun=13;HaplotypeScore=78.7095;InbreedingCoeff=0.6836;MQ=70.91;MQ0=6;MQRankSum=0.807;QD=7.92;ReadPosRankSum=3.310;VQSLOD=2.8444;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,2:40:46.58:0,47,739	0/0:2,0:10:14.53:0,15,101	0/1:38,2:23:9.15:9,0,112	0/0:32,0:22:3.18:0,3,83	0/0:17,0:17:11.89:0,12,143	1/1:4,12:16:11.23:216,11,0	1/1:7,17:24:37:265,37,0	0/0:38,0:40:58.85:0,59,647	0/0:15,0:15:35.06:0,35,315	0/0:2,0:17:33.43:0,33,178	0/0:5,0:16:22.73:0,23,126	0/1:4,9:13:37.12:89,0,37	1/1:0,8:8:20.88:153,21,0	1/1:4,12:18:19.21:136,19,0	0/0:19,0:20:17:0,17,314	0/0:26,0:25:30.39:0,30,491	0/0:9,0:34:45.45:0,45,258	1/1:10,14:24:11.54:238,12,0	0/1:21,0:22:5.37:5,0,264	0/0:18,0:19:4.94:0,5,187	0/0:16,0:16:27.10:0,27,224	1/1:5,11:17:9.71:199,10,0	0/1:11,13:25:2.39:253,0,2	1/1:4,15:19:38.74:284,39,0	0/0:20,0:22:42.62:0,43,403	1/1:5,12:17:37.80:266,38,0	0/0:17,0:17:20.27:0,20,351	1/1:2,17:19:23.86:175,24,0
chr10	87827023	.	G	GAAAAA	3539.35	PASS	AB=0.976;AC=16;AF=0.296;AN=54;BaseQRankSum=7.244;DP=411;FS=0.529;HRun=8;HaplotypeScore=109.6783;InbreedingCoeff=0.2867;MQ=47.68;MQ0=11;MQRankSum=-3.927;QD=23.29;ReadPosRankSum=-3.130;VQSLOD=-0.0280;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:31:3.76:0,4,587	0/0:10,0:10:23.98:0,24,338	./.	0/0:4,0:4:1.59:0,2,4	0/0:14,0:14:7.63:0,8,152	1/1:8,0:7:12.04:254,12,0	0/1:15,1:15:66.76:287,0,67	0/0:29,0:27:53.74:0,54,610	0/0:11,0:11:23.96:0,24,281	0/0:16,0:16:24.31:0,24,253	0/0:15,0:15:14.66:0,15,185	0/1:12,0:12:38.95:80,0,39	1/1:9,0:9:21.07:522,21,0	1/1:10,1:10:12.04:254,12,0	0/0:21,0:21:35.67:0,36,508	0/0:17,0:17:41.87:0,42,617	0/0:36,0:36:86.88:0,87,1206	0/1:28,1:27:69.51:751,0,70	0/0:14,0:13:9.55:0,10,245	0/0:15,0:15:23.79:0,24,270	0/0:8,0:8:11.83:0,12,81	0/1:7,0:7:18.94:98,0,19	0/1:10,0:8:16.80:225,0,17	0/1:8,1:9:3.25:257,0,3	0/1:13,0:13:38.62:39,0,132	1/1:14,0:12:27.07:507,27,0	0/0:12,0:12:16.79:0,17,152	0/1:13,0:13:4.93:265,0,5
chr10	87827042	.	G	GA	1110.81	PASS	AB=0.924;AC=20;AF=0.357;AN=56;BaseQRankSum=7.512;DP=518;FS=0.926;HRun=13;HaplotypeScore=79.4073;InbreedingCoeff=0.1671;MQ=59.85;MQ0=7;MQRankSum=-0.606;QD=4.22;ReadPosRankSum=3.694;VQSLOD=1.2470;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,8:35:16.48:356,16,0	0/0:7,0:7:17.85:0,18,123	0/1:14,0:7:15.10:15,0,22	0/0:16,0:11:5.55:0,6,42	0/0:20,0:20:36.57:0,37,297	1/1:13,0:11:6.24:39,6,0	0/1:15,0:14:10.14:10,0,97	0/0:46,0:46:12.96:0,13,381	0/0:15,0:15:26.11:0,26,172	0/0:16,0:16:27.40:0,27,170	0/0:19,0:19:10.43:0,10,160	0/1:11,0:11:5.53:6,0,17	0/1:14,0:15:17.88:18,0,47	0/1:10,1:11:23.14:46,0,23	0/0:14,0:16:22.04:0,22,250	0/0:21,0:21:44.55:0,45,306	0/0:35,0:35:64.20:0,64,424	1/1:30,0:29:6.33:169,6,0	0/1:18,5:24:44.15:189,0,44	0/1:8,9:17:36.40:105,0,36	0/0:9,0:9:8.84:0,9,59	0/0:9,0:9:9.73:0,10,64	0/1:14,0:13:31.53:32,0,57	0/1:9,1:11:20.87:53,0,21	0/0:23,0:23:35.24:0,35,322	0/1:27,0:26:41.96:42,0,149	1/1:9,2:11:17.76:150,18,0	1/1:10,0:10:13.82:61,14,0
chr10	87827043	.	A	AAAAG	1934.63	PASS	AB=0.946;AC=14;AF=0.250;AN=56;BaseQRankSum=3.057;DP=522;FS=16.525;HRun=0;HaplotypeScore=107.5174;InbreedingCoeff=-0.1275;MQ=60.83;MQ0=7;MQRankSum=1.103;QD=9.72;ReadPosRankSum=6.186;VQSLOD=1.3531;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:35:54.85:0,55,478	0/0:8,0:8:21.04:0,21,335	0/1:15,0:8:0.12:0,0,63	0/1:17,0:11:10.60:11,0,59	0/0:20,0:20:51.49:0,51,720	0/1:13,0:11:72.46:143,0,72	0/1:12,5:16:82.23:82,0,146	0/0:48,0:47:86.50:0,87,1165	0/0:16,0:16:32.40:0,32,419	0/0:16,0:16:35.90:0,36,384	0/0:18,0:18:40.60:0,41,516	0/1:4,7:11:48.10:62,0,48	0/1:16,0:16:79.08:79,0,169	0/1:11,0:11:49.62:152,0,50	0/0:16,0:16:22.93:0,23,672	0/0:21,0:21:63.04:0,63,889	0/0:35,0:35:72.77:0,73,1166	0/1:27,0:26:80.51:574,0,81	0/0:24,0:24:47.97:0,48,457	0/0:17,0:17:31.39:0,31,253	0/0:9,0:9:11.94:0,12,127	0/1:9,0:9:47.40:47,0,53	0/1:15,0:14:79.47:79,0,154	0/1:11,0:11:74.52:180,0,75	0/0:24,0:23:63.22:0,63,793	0/1:26,1:26:99:438,0,242	0/0:11,0:11:22.69:0,23,157	1/1:10,0:10:14.90:243,15,0
chr10	87827601	.	A	AC	4630.22	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=5.863;DP=548;FS=3.295;HRun=1;HaplotypeScore=117.9169;InbreedingCoeff=0.9059;MQ=53.28;MQ0=21;MQRankSum=-10.404;QD=25.44;ReadPosRankSum=-0.023;VQSLOD=4.7084;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:75.07:0,75,845	0/0:9,0:10:30.07:0,30,341	0/0:35,0:11:2.87:0,3,104	0/1:21,0:9:5.99:6,0,60	0/0:31,0:30:84.07:0,84,995	1/1:1,14:15:42.05:558,42,0	1/1:2,8:9:26.96:349,27,0	0/0:32,0:31:82.60:0,83,919	0/0:17,0:17:48.06:0,48,581	0/0:26,0:26:72.02:0,72,796	0/0:18,0:18:47.87:0,48,525	1/1:4,8:12:32.70:367,33,0	1/1:5,7:11:26.92:314,27,0	1/1:3,5:8:20.97:248,21,0	0/0:26,0:26:74.93:0,75,852	0/0:15,0:15:44.96:0,45,530	0/0:33,0:33:92.85:0,93,1026	1/1:13,13:25:65.56:699,66,0	0/0:31,0:27:69.57:0,70,781	0/0:19,0:18:51.04:0,51,567	0/0:7,0:7:21.06:0,21,258	1/1:8,14:20:47.81:526,48,0	1/1:6,10:16:42.01:501,42,0	1/1:4,11:15:23.98:279,24,0	0/0:16,0:16:45.11:0,45,563	1/1:6,16:21:53.57:659,54,0	0/0:21,0:21:54.45:0,54,553	1/1:0,3:3:9.03:126,9,0
chr10	87827606	.	AAC	A	3805.36	PASS	AB=0.989;AC=30;AF=0.536;AN=56;BaseQRankSum=16.016;DP=535;FS=6.804;HRun=0;HaplotypeScore=125.5258;InbreedingCoeff=0.4082;MQ=52.61;MQ0=20;MQRankSum=-8.518;QD=11.50;ReadPosRankSum=5.512;VQSLOD=2.9691;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:24:47.32:161,0,47	0/1:9,1:10:17.91:62,0,18	0/0:36,0:12:33.02:0,33,456	0/0:22,0:11:9.22:0,9,240	0/0:31,0:30:81.25:0,81,1329	1/1:16,0:16:39.71:358,40,0	1/1:12,1:12:33.12:277,33,0	0/0:32,0:32:87.09:0,87,1282	0/0:17,0:17:45.14:0,45,791	0/1:25,0:25:99:115,0,135	0/1:18,0:18:99:102,0,112	1/1:12,0:12:26.64:213,27,0	1/1:9,0:8:22.60:220,23,0	1/1:8,0:8:18.71:145,19,0	0/0:27,0:27:69.21:0,69,1127	0/0:16,0:16:45.15:0,45,783	0/1:29,0:29:85.25:85,0,259	1/1:22,1:22:51.03:418,51,0	0/1:28,0:24:63.55:64,0,247	0/1:18,0:17:63.95:80,0,64	0/0:8,0:8:24.08:0,24,437	1/1:22,1:21:39.02:319,39,0	1/1:13,3:16:40.67:369,41,0	1/1:15,0:15:17.20:144,17,0	0/0:15,0:15:45.15:0,45,787	1/1:20,1:21:46.28:491,46,0	0/1:18,0:18:24.24:95,0,24	1/1:3,0:3:9.01:88,9,0
chr10	87827619	.	AC	A	5249.15	PASS	AB=0.588;AC=37;AF=0.661;AN=56;BaseQRankSum=16.374;DP=499;FS=2.012;HRun=1;HaplotypeScore=111.7330;InbreedingCoeff=0.7945;MQ=56.96;MQ0=10;MQRankSum=-7.187;QD=16.66;ReadPosRankSum=4.348;VQSLOD=5.3990;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,18:25:25.10:421,25,0	1/1:2,8:10:10.80:176,11,0	0/0:24,0:13:37.94:0,38,550	0/0:21,1:15:7.58:0,8,475	0/0:21,0:21:63.14:0,63,954	1/1:4,10:14:38.65:296,39,0	1/1:2,9:11:32.67:229,33,0	0/0:33,0:33:99:0,99,1534	0/0:18,0:18:51.17:0,51,785	1/1:7,14:21:5.14:318,5,0	1/1:6,11:17:0.66:227,1,0	1/1:3,10:13:35.77:271,36,0	1/1:2,7:9:26.72:185,27,0	1/1:3,6:9:23.88:187,24,0	0/0:24,0:24:72.19:0,72,1058	0/0:18,0:18:54.17:0,54,823	1/1:6,16:22:19.32:330,19,0	1/1:11,13:23:56.29:425,56,0	1/1:9,11:23:0.59:315,1,0	0/1:6,9:19:12.06:257,0,12	0/0:8,0:8:24.08:0,24,371	1/1:6,14:20:53.59:397,54,0	1/1:9,11:20:53.19:369,53,0	1/1:5,5:10:12.18:82,12,0	0/0:15,0:15:45.15:0,45,703	1/1:6,17:23:49.52:455,50,0	1/1:3,13:16:6.29:221,6,0	1/1:1,3:4:11.93:87,12,0
chr10	87827620	.	C	CA	2262.07	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=10.264;DP=504;FS=2.384;HRun=2;HaplotypeScore=124.3003;InbreedingCoeff=0.9378;MQ=58.25;MQ0=8;MQRankSum=-7.981;QD=12.29;ReadPosRankSum=0.602;VQSLOD=2.4736;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:58.39:0,58,236	0/0:11,0:11:23.54:0,24,92	0/0:25,0:14:22.94:0,23,407	0/0:23,0:15:30.01:0,30,421	0/0:21,0:21:60.19:0,60,737	1/1:14,0:14:25.94:204,26,0	1/1:10,1:11:20.51:208,21,0	0/0:33,0:33:99:0,99,1212	0/0:19,0:19:51.13:0,51,601	0/0:21,0:21:44.14:0,44,194	0/0:16,0:16:39.93:0,40,183	1/1:11,3:14:26.66:199,27,0	1/1:8,2:10:19.43:161,19,0	1/1:7,2:9:19.18:150,19,0	0/0:24,0:24:72.19:0,72,863	0/0:18,0:18:54.17:0,54,668	0/1:22,0:22:1.70:2,0,125	1/1:20,5:24:18.60:378,19,0	0/0:25,0:23:42.23:0,42,186	0/0:20,0:19:18.93:0,19,137	0/0:8,0:8:24.07:0,24,294	1/1:17,4:21:33.73:261,34,0	1/1:15,6:21:44.04:354,44,0	1/1:10,0:10:9.48:80,9,0	0/0:15,0:15:45.14:0,45,557	1/1:19,4:23:39.63:388,40,0	0/0:16,0:16:39.34:0,39,164	1/1:3,1:4:11.93:99,12,0
chr10	87827621	.	AAC	A	8036.88	PASS	AB=0.714;AC=37;AF=0.661;AN=56;BaseQRankSum=15.714;DP=516;FS=2.481;HRun=0;HaplotypeScore=114.8399;InbreedingCoeff=0.9235;MQ=60.95;MQ0=8;MQRankSum=-8.162;QD=25.04;ReadPosRankSum=5.239;VQSLOD=5.4328;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,18:25:36.86:518,37,0	1/1:3,8:11:15.30:220,15,0	0/0:27,0:17:48:0,48,620	0/0:24,0:16:23.87:0,24,457	0/0:21,0:21:60.21:0,60,1090	1/1:14,0:14:37.32:453,37,0	1/1:12,0:12:33.08:440,33,0	0/0:36,0:36:99:0,108,1577	0/0:20,0:20:56.36:0,56,801	1/1:5,15:20:14.86:383,15,0	1/1:5,11:16:13.05:266,13,0	1/1:14,0:14:36.12:494,36,0	1/1:10,0:10:27.04:353,27,0	1/1:10,0:10:24.95:319,25,0	0/0:24,0:24:72.19:0,72,1138	0/0:18,0:18:54.17:0,54,913	1/1:7,16:23:27.85:396,28,0	1/1:25,0:24:58.30:740,58,0	1/1:14,11:23:7.16:339,7,0	0/1:12,8:19:1.07:283,0,1	0/0:9,0:9:27.09:0,27,469	1/1:21,0:21:54.02:663,54,0	1/1:21,0:21:57.04:691,57,0	1/1:11,0:11:14.74:176,15,0	0/0:16,0:16:48.15:0,48,803	1/1:23,0:23:54.81:850,55,0	1/1:4,12:16:16.24:292,16,0	1/1:4,0:4:12.04:163,12,0
chr10	87827622	.	AC	A	5483.39	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=16.404;DP=514;FS=1.964;HRun=1;HaplotypeScore=114.6068;InbreedingCoeff=0.9877;MQ=61.10;MQ0=8;MQRankSum=-8.402;QD=17.35;ReadPosRankSum=5.231;VQSLOD=5.3944;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:47:446,47,0	1/1:11,0:11:22.45:190,22,0	0/0:27,0:17:46.71:0,47,515	0/0:23,2:17:27.41:0,27,430	0/0:20,0:20:60.20:0,60,864	1/1:5,9:14:38.71:299,39,0	1/1:3,9:12:32.72:233,33,0	0/0:37,0:37:99:0,111,1402	0/0:20,0:20:56.05:0,56,666	1/1:20,0:20:26.50:349,26,0	1/1:16,0:16:20.23:228,20,0	1/1:4,9:13:35.84:276,36,0	1/1:3,7:10:26.75:189,27,0	1/1:5,5:10:26.90:217,27,0	0/0:25,0:25:75.21:0,75,1007	0/0:19,0:19:57.17:0,57,789	1/1:21,0:21:42.38:375,42,0	1/1:12,11:22:55.23:417,55,0	1/1:25,0:23:25.35:311,25,0	1/1:19,1:19:16.87:256,17,0	0/0:9,0:9:27.07:0,27,373	1/1:7,14:21:53.63:401,54,0	1/1:10,11:21:55.41:392,55,0	1/1:6,5:11:13.90:92,14,0	0/0:16,0:16:48.15:0,48,663	1/1:6,17:23:60.38:477,60,0	1/1:16,0:16:27.76:245,28,0	1/1:1,3:4:11.94:89,12,0
chr10	87827623	.	C	CAAAA	4409.26	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=6.188;DP=518;FS=10.830;HRun=6;HaplotypeScore=150.1520;InbreedingCoeff=0.7552;MQ=60.62;MQ0=8;MQRankSum=-8.838;QD=18.30;ReadPosRankSum=-2.089;VQSLOD=0.6823;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:33.29:0,33,164	0/1:11,0:11:3.14:3,0,58	0/0:27,0:18:41.11:0,41,556	0/0:24,0:16:25.92:0,26,408	0/0:20,0:20:60.20:0,60,970	1/1:14,0:14:30.23:312,30,0	1/1:12,0:12:27.17:317,27,0	0/0:38,0:38:77.48:0,77,1466	0/0:20,0:20:48.12:0,48,706	0/1:20,0:20:1.75:2,0,110	0/0:16,0:16:24.95:0,25,106	1/1:13,0:13:35.93:403,36,0	1/1:10,0:10:26.85:255,27,0	1/1:10,0:10:26.97:322,27,0	0/0:26,0:26:72.22:0,72,1121	0/0:19,0:19:57.18:0,57,886	0/1:20,0:20:35.60:36,0,77	1/1:22,0:22:21.09:712,21,0	0/1:24,0:22:30.70:31,0,48	0/0:20,0:19:25.08:0,25,104	0/0:9,0:9:27.07:0,27,412	1/1:21,0:21:51.91:559,52,0	1/1:21,0:21:50.33:590,50,0	1/1:6,5:14:14.96:162,15,0	0/0:16,0:16:48.15:0,48,749	1/1:24,0:24:60.10:578,60,0	0/0:16,0:16:23.58:0,24,127	1/1:4,0:4:11.95:128,12,0
chr10	87828245	.	T	TTG	9079.16	PASS	AB=0.756;AC=22;AF=0.393;AN=56;BaseQRankSum=-15.175;DP=728;FS=1.034;HRun=0;HaplotypeScore=104.0904;InbreedingCoeff=0.8659;MQ=63.37;MQ0=8;MQRankSum=1.311;QD=29.29;ReadPosRankSum=5.549;VQSLOD=6.5162;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:58.83:0,59,355	0/0:14,0:14:26.05:0,26,159	0/0:24,0:11:26.51:0,27,248	0/0:15,0:8:22.76:0,23,199	0/0:29,0:29:75.13:0,75,957	1/1:2,26:28:53.83:857,54,0	0/1:1,18:20:5.68:555,0,6	0/0:28,0:28:67.32:0,67,801	0/0:21,0:21:62.33:0,62,758	0/0:32,0:30:78.56:0,79,595	0/0:27,0:27:64.67:0,65,459	1/1:0,23:24:42.14:697,42,0	1/1:1,23:25:36.11:598,36,0	1/1:0,13:14:33.11:540,33,0	0/0:30,0:30:84:0,84,1071	0/0:32,0:31:85.54:0,86,1099	0/1:28,0:27:32.16:32,0,201	1/1:1,25:26:48.14:795,48,0	0/0:19,0:18:49.88:0,50,520	0/0:35,0:35:89.82:0,90,726	0/0:20,0:20:57.13:0,57,798	1/1:0,20:21:54:794,54,0	1/1:3,21:24:39.84:596,40,0	1/1:0,32:30:75.26:1243,75,0	0/0:26,0:26:74.69:0,75,950	1/1:3,41:43:72.32:1776,72,0	0/0:34,0:33:68.66:0,69,527	1/1:5,19:24:36.06:596,36,0
chr10	87828251	.	T	TTTTG	4706.83	PASS	AB=0.833;AC=16;AF=0.286;AN=56;BaseQRankSum=0.886;DP=717;FS=10.453;HRun=0;HaplotypeScore=149.1255;InbreedingCoeff=0.4870;MQ=60.69;MQ0=10;MQRankSum=3.313;QD=15.28;ReadPosRankSum=-1.410;VQSLOD=3.7036;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:31:24.27:586,24,0	1/1:1,1:17:29.58:426,30,0	0/0:22,0:9:20.89:0,21,189	0/0:15,0:8:17.02:0,17,123	0/0:26,0:26:56.39:0,56,666	0/0:31,0:31:25.98:0,26,254	0/0:22,0:22:26.79:0,27,209	0/0:26,0:26:32.78:0,33,505	0/0:22,0:23:42.77:0,43,673	1/1:2,0:36:93.93:1150,94,0	1/1:2,1:26:50.48:698,50,0	0/0:26,0:26:37.14:0,37,249	0/0:23,0:23:33.86:0,34,168	0/0:14,0:14:12.64:0,13,128	0/0:28,0:27:40.21:0,40,939	0/0:30,0:29:45.50:0,46,827	1/1:4,0:26:38.63:648,39,0	0/0:25,0:25:34.02:0,34,193	0/1:14,0:20:99:147,0,113	0/1:14,0:34:95.88:579,0,96	0/0:19,0:19:47.97:0,48,669	0/1:19,0:19:37.36:37,0,94	0/1:23,0:23:4.57:5,0,121	0/0:32,0:30:43.07:0,43,307	0/0:24,0:24:59.44:0,59,802	0/1:40,0:40:47.90:48,0,311	0/1:13,1:28:21.34:382,0,21	0/0:23,0:23:40.30:0,40,219
chr10	87829115	.	G	GA	9699.52	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-13.799;DP=631;FS=0.986;HRun=1;HaplotypeScore=64.0030;InbreedingCoeff=0.9998;MQ=81.93;MQ0=0;MQRankSum=-0.403;QD=40.08;ReadPosRankSum=3.339;VQSLOD=5.4860;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.21:0,90,1118	0/0:10,0:10:30.10:0,30,389	0/0:23,0:21:42.10:0,42,520	0/0:32,0:29:75.48:0,75,874	0/0:16,0:16:42.03:0,42,500	1/1:1,22:23:60.20:899,60,0	1/1:1,27:28:69.23:1034,69,0	0/0:30,0:30:84.26:0,84,1065	0/0:20,0:20:60.20:0,60,779	0/0:19,0:19:54.18:0,54,700	0/0:13,0:13:39.11:0,39,491	1/1:0,20:20:57.19:853,57,0	1/1:0,16:15:42.14:627,42,0	1/1:3,13:16:36.12:539,36,0	0/0:31,0:31:93.30:0,93,1207	0/0:25,0:25:75.24:0,75,973	0/0:26,0:26:78.25:0,78,1013	1/1:0,24:24:66.22:989,66,0	0/0:26,0:26:72.22:0,72,907	0/0:17,0:17:48.16:0,48,623	0/0:41,0:41:99:0,123,1553	1/1:0,19:19:54.18:809,54,0	1/1:0,16:16:42.14:629,42,0	1/1:1,38:39:99:1619,108,0	0/0:14,0:14:42.11:0,42,517	1/1:1,30:31:87.24:1252,87,0	0/0:15,0:15:39.13:0,39,504	1/1:0,10:10:30.10:449,30,0
chr10	87829240	.	GA	G	655	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=14.652;DP=560;FS=0.000;HRun=1;HaplotypeScore=71.0119;InbreedingCoeff=0.5610;MQ=75.61;MQ0=0;MQRankSum=-0.726;QD=4.20;ReadPosRankSum=3.999;VQSLOD=0.5204;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:20.35:104,0,20	1/1:2,0:2:5.12:20,5,0	0/0:12,0:12:35.86:0,36,490	0/0:16,0:16:44.56:0,45,548	0/0:13,0:13:39.07:0,39,510	0/0:18,0:18:54.17:0,54,829	0/0:20,0:20:60.13:0,60,837	0/0:22,0:22:63.18:0,63,914	0/0:18,0:18:54.18:0,54,856	0/1:27,0:27:32.90:102,0,33	1/1:11,4:15:13.25:157,13,0	0/0:26,0:26:72.18:0,72,1038	0/0:11,0:11:33.11:0,33,523	0/0:17,0:17:51.16:0,51,782	0/0:28,0:28:84.23:0,84,1252	0/0:16,0:16:45.09:0,45,686	0/1:32,0:32:6.84:111,0,7	0/0:23,0:23:69.21:0,69,1065	0/1:29,0:29:31.57:76,0,32	1/1:14,0:14:30.14:175,30,0	0/0:63,0:63:99:0,186,2794	0/0:11,0:11:20.70:0,21,285	0/0:9,0:9:26.96:0,27,315	0/0:33,0:33:96.26:0,96,1443	0/0:16,0:16:45.14:0,45,678	0/0:23,0:23:69.03:0,69,915	1/1:13,0:13:27.70:80,28,0	0/0:9,0:9:27.05:0,27,401
chr10	87829241	.	AC	A	4001.17	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.843;DP=563;FS=4.401;HRun=7;HaplotypeScore=60.3873;InbreedingCoeff=0.9800;MQ=74.81;MQ0=0;MQRankSum=-0.153;QD=25.32;ReadPosRankSum=2.830;VQSLOD=4.3296;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:60.13:612,60,0	1/1:1,1:2:6.01:61,6,0	0/0:12,0:12:30.08:0,30,344	0/0:15,0:15:31.91:0,32,376	0/0:13,0:13:33.11:0,33,412	0/0:19,0:19:51.16:0,51,642	0/0:20,0:20:54.17:0,54,678	0/0:21,0:21:54.17:0,54,668	0/0:18,0:18:54.17:0,54,671	1/1:4,24:28:69.15:704,69,0	1/1:5,10:15:35.94:353,36,0	0/0:26,0:26:69.19:0,69,832	0/0:11,0:11:33.11:0,33,415	0/0:17,0:17:48.15:0,48,604	0/0:28,0:28:81.25:0,81,1006	0/0:16,0:16:42.13:0,42,524	1/1:3,29:32:75.17:765,75,0	0/0:23,0:23:66.21:0,66,830	1/1:4,26:30:75.10:747,75,0	1/1:0,14:14:36.07:363,36,0	0/0:62,0:62:99:0,181,2238	0/0:13,0:13:23.78:0,24,264	0/0:9,0:9:18.06:0,18,226	0/0:34,0:34:96.20:0,96,1146	0/0:16,0:16:48.15:0,48,591	0/0:23,0:23:60.19:0,60,751	1/1:0,13:13:39.09:398,39,0	0/0:9,0:9:24.08:0,24,302
chr10	87830834	.	CCCCG	C	908.42	PASS	AB=0.957;AC=12;AF=0.214;AN=56;BaseQRankSum=6.486;DP=288;FS=13.890;HRun=0;HaplotypeScore=56.1740;InbreedingCoeff=0.0149;MQ=72.65;MQ0=1;MQRankSum=-3.490;QD=8.26;ReadPosRankSum=9.430;VQSLOD=-0.1914;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:7.38:0,7,47	0/0:4,0:4:2.97:0,3,20	0/0:20,0:13:23.15:0,23,324	0/0:4,0:5:7.44:0,7,38	0/0:6,0:6:8.55:0,9,52	0/1:8,0:8:40.66:78,0,41	1/1:22,1:23:6.03:326,6,0	0/0:8,0:8:11.28:0,11,74	0/0:9,0:9:14.93:0,15,114	0/0:5,0:5:1.51:0,2,4	0/0:5,0:5:3:0,3,25	0/1:9,0:9:28.07:28,0,52	0/1:4,2:6:34.56:111,0,35	0/1:13,0:13:54.80:55,0,73	0/0:7,0:7:14.87:0,15,121	0/0:27,0:27:37.99:0,38,322	0/0:22,0:22:16.70:0,17,165	0/1:18,2:20:26.83:198,0,27	0/0:8,0:8:11.85:0,12,126	0/0:3,0:3:5.96:0,6,44	0/0:22,0:22:17.25:0,17,144	1/1:4,0:4:8.99:81,9,0	0/0:9,0:9:17.91:0,18,138	0/1:12,0:12:26.30:126,0,26	0/0:9,0:9:8.93:0,9,64	0/1:10,0:10:28.91:29,0,117	0/0:2,0:2:5.99:0,6,49	0/1:5,0:5:21.98:27,0,22
chr10	87831491	.	C	CT	1119.58	PASS	AB=0.850;AC=10;AF=0.179;AN=56;BaseQRankSum=-8.950;DP=599;FS=0.501;HRun=14;HaplotypeScore=86.1246;InbreedingCoeff=0.2570;MQ=61.24;MQ0=15;MQRankSum=0.364;QD=5.68;ReadPosRankSum=-2.411;VQSLOD=2.1425;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,15:42:7.55:483,0,8	0/1:1,3:6:1.67:42,0,2	0/1:20,0:9:8.75:9,0,13	0/1:19,0:7:0.46:25,0,0	0/0:25,2:28:19.82:0,20,247	0/0:20,0:19:47.19:0,47,307	0/0:21,0:20:56.09:0,56,363	0/0:24,0:30:21.61:0,22,102	0/1:15,0:16:21.99:22,0,75	0/1:9,8:18:5.10:109,0,5	1/1:5,12:17:26.91:223,27,0	0/0:13,0:13:29.34:0,29,189	0/0:15,0:15:32.38:0,32,210	0/0:15,0:15:35.31:0,35,228	0/0:19,0:21:7.12:0,7,153	0/0:22,0:26:39.45:0,39,241	0/1:27,13:41:99:344,0,145	0/0:32,0:32:64.72:0,65,420	0/0:17,0:20:17.80:0,18,94	0/1:16,1:16:10.15:10,0,66	0/0:12,0:16:16.77:0,17,80	0/0:17,0:17:32.46:0,32,211	0/0:24,0:24:58.99:0,59,382	0/0:17,0:17:41.14:0,41,266	0/0:19,0:22:20.66:0,21,113	0/0:22,0:21:47.05:0,47,304	0/0:23,0:28:29.26:0,29,170	0/0:15,0:15:32.44:0,32,211
chr10	87831826	.	T	TTATC	5482.15	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-11.639;DP=440;FS=4.372;HRun=0;HaplotypeScore=81.4536;InbreedingCoeff=0.9005;MQ=66.42;MQ0=6;MQRankSum=1.644;QD=36.55;ReadPosRankSum=1.105;VQSLOD=4.4452;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,19:25:36.12:896,36,0	1/1:0,8:8:20.81:350,21,0	0/0:10,0:7:13.70:0,14,137	0/0:12,0:10:14.95:0,15,174	0/0:23,0:23:60.14:0,60,861	0/0:16,0:16:33.09:0,33,369	0/0:11,0:11:23.98:0,24,233	0/0:33,0:33:65.82:0,66,795	0/0:9,0:9:18.04:0,18,257	1/1:2,13:15:39.08:776,39,0	1/1:6,7:14:20.90:384,21,0	0/0:13,0:13:26.53:0,27,301	0/0:17,0:17:33.06:0,33,359	0/0:9,0:9:15.04:0,15,171	0/0:18,0:18:30.05:0,30,409	0/0:12,0:12:33.09:0,33,491	1/1:7,26:34:63.22:1572,63,0	0/0:30,1:31:0.25:0,0,702	1/1:8,7:13:21.06:476,21,0	1/1:2,9:11:23.91:430,24,0	0/0:4,0:4:12.03:0,12,178	0/0:1,0:1:3.01:0,3,32	0/0:12,0:12:24.05:0,24,252	0/0:5,0:5:9.03:0,9,103	0/0:25,0:25:66.20:0,66,1050	0/0:19,0:19:42.58:0,43,469	1/1:7,19:26:24.08:599,24,0	0/0:10,0:10:14.93:0,15,145
chr10	87831838	.	CTATT	C	4020.50	PASS	AB=0.588;AC=21;AF=0.375;AN=56;BaseQRankSum=0.974;DP=417;FS=10.676;HRun=0;HaplotypeScore=80.8210;InbreedingCoeff=0.8376;MQ=63.22;MQ0=6;MQRankSum=3.815;QD=29.13;ReadPosRankSum=2.503;VQSLOD=2.5263;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:45.11:0,45,783	0/0:8,0:8:12.04:0,12,231	0/0:10,0:7:5.84:0,6,40	0/0:10,0:8:18.06:0,18,324	0/0:23,0:23:51.14:0,51,1099	1/1:2,15:17:30.10:503,30,0	1/1:4,4:8:12.04:201,12,0	0/0:30,0:30:54.60:0,55,965	0/0:9,0:9:15.04:0,15,323	0/0:14,0:14:33.11:0,33,593	0/0:13,0:12:33.01:0,33,471	1/1:1,13:14:23.10:401,23,0	1/1:3,14:17:30.10:493,30,0	1/1:3,8:11:15.05:252,15,0	0/0:17,0:17:27.09:0,27,598	0/0:13,0:13:33.11:0,33,730	0/0:34,0:33:72.20:0,72,1307	0/1:9,21:30:21.57:894,0,22	0/0:15,0:13:27.06:0,27,442	0/0:10,0:10:18.06:0,18,358	0/0:4,0:4:9.03:0,9,214	1/1:1,0:1:3.01:48,3,0	1/1:4,8:12:14.59:251,15,0	1/1:0,7:7:9.03:151,9,0	0/0:24,0:24:63.19:0,63,1462	1/1:2,14:16:42.13:675,42,0	0/0:21,0:21:30.07:0,30,512	1/1:2,3:5:9.03:151,9,0
chr10	87833311	.	CTG	C	1138	PASS	AB=0.934;AC=35;AF=0.729;AN=48;BaseQRankSum=4.467;DP=668;FS=2.082;HRun=0;HaplotypeScore=91.7994;InbreedingCoeff=0.0122;MQ=62.28;MQ0=34;MQRankSum=2.257;QD=2.19;ReadPosRankSum=2.849;VQSLOD=1.7137;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:37:2.63:14,3,0	1/1:7,0:11:5.52:27,6,0	./.	./.	0/1:19,0:18:10.49:10,0,187	0/1:13,11:24:26.13:26,0,38	1/1:27,6:33:3.01:32,3,0	0/0:27,0:25:10.58:0,11,57	0/1:24,1:25:30.97:31,0,287	1/1:17,0:19:6.35:38,6,0	./.	1/1:34,0:33:9.79:153,10,0	1/1:18,5:22:8.02:71,8,0	1/1:24,0:22:20.46:203,20,0	0/0:25,0:25:8.36:0,8,131	0/1:18,2:17:17.14:17,0,111	1/1:25,0:26:6.15:29,6,0	0/1:24,0:22:33.03:66,0,33	1/1:19,0:19:2.84:14,3,0	0/0:8,0:9:0:0,0,0	0/1:65,1:64:99:135,0,232	1/1:13,7:18:2.62:32,3,0	1/1:16,1:19:11.84:97,12,0	1/1:13,13:28:17.71:156,18,0	0/1:10,0:10:26.42:26,0,37	1/1:18,0:17:8.85:72,9,0	1/1:7,0:11:5.68:28,6,0	./.
chr10	87833480	.	A	AATTCATTC	10391.04	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-2.651;DP=610;FS=0.995;HRun=0;HaplotypeScore=162.2903;InbreedingCoeff=0.7938;MQ=72.48;MQ0=0;MQRankSum=-9.373;QD=27.34;ReadPosRankSum=0.220;VQSLOD=4.5779;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:39:2.70:10,3,0	0/0:7,0:7:0.39:0,0,10	0/0:19,0:18:6:0,6,152	0/0:20,0:19:15.05:0,15,322	0/0:15,0:15:27.09:0,27,663	1/1:5,15:20:36.12:1493,36,0	1/1:7,12:21:30.09:1054,30,0	0/0:32,0:32:51.17:0,51,1096	0/0:28,0:28:60.21:0,60,1503	0/1:34,0:34:0:4,0,0	1/1:16,0:16:8.66:57,9,0	1/1:4,11:15:18.06:742,18,0	1/1:4,9:15:27.09:1053,27,0	1/1:8,15:24:36.12:1491,36,0	0/0:28,0:28:63.19:0,63,1487	0/0:26,0:26:60.19:0,60,1421	0/1:21,0:21:0:2,0,0	1/1:11,7:20:15.05:622,15,0	1/1:17,0:17:6.01:57,6,0	1/1:19,0:19:6.47:58,6,0	0/0:33,0:33:87.28:0,87,2035	1/1:5,17:25:45.10:1647,45,0	1/1:9,9:20:24.07:892,24,0	1/1:8,8:16:12.04:410,12,0	0/0:22,0:22:42.14:0,42,1072	1/1:13,0:34:65.94:626,66,0	0/1:10,0:10:0.22:0,0,0	1/1:6,0:14:20.98:173,21,0
chr10	87833498	.	T	TTCA	9965.99	PASS	AB=0.994;AC=27;AF=0.482;AN=56;BaseQRankSum=1.062;DP=587;FS=11.279;HRun=0;HaplotypeScore=105.7137;InbreedingCoeff=0.2119;MQ=73.60;MQ0=0;MQRankSum=-6.588;QD=26.79;ReadPosRankSum=6.761;VQSLOD=3.9127;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,35:38:72.25:1551,72,0	1/1:1,7:8:20.98:452,21,0	0/0:22,0:21:18.39:0,18,424	0/0:16,0:15:33.07:0,33,463	0/0:12,0:12:36.12:0,36,571	0/1:19,0:19:99:285,0,126	0/1:22,0:22:99:201,0,109	0/0:34,0:34:87.30:0,87,1356	0/0:28,0:28:81.25:0,81,1248	1/1:2,27:29:81.27:1684,81,0	1/1:1,14:15:42.14:825,42,0	0/1:15,0:15:84.21:131,0,84	0/1:18,0:18:99:180,0,201	0/1:25,0:25:99:275,0,225	0/0:26,0:26:72.25:0,72,1160	0/0:24,0:24:72.24:0,72,1138	1/1:0,19:19:45.15:1005,45,0	0/1:18,0:18:97.14:97,0,273	1/1:3,12:15:36.12:659,36,0	1/1:5,15:21:42.14:853,42,0	0/0:35,0:35:99:0,102,1616	0/1:25,0:25:99:312,0,141	0/1:18,0:18:34.56:185,0,35	0/1:16,0:16:50.71:51,0,245	0/0:18,0:18:54.18:0,54,860	0/1:27,2:29:99:607,0,127	1/1:3,10:13:21.07:440,21,0	0/1:9,0:9:19.57:171,0,20
chr10	87834868	.	C	CTGTG	2456.50	PASS	AB=0.984;AC=30;AF=0.556;AN=54;BaseQRankSum=5.573;DP=737;FS=2.584;HRun=0;HaplotypeScore=175.0513;InbreedingCoeff=0.4277;MQ=60.31;MQ0=25;MQRankSum=-2.198;QD=6.10;ReadPosRankSum=-2.134;VQSLOD=2.5286;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:23:0:0,0,0	0/1:12,0:11:0:0,0,0	0/0:54,0:30:17.97:0,18,217	0/0:43,0:23:7.72:0,8,144	0/0:28,0:24:14.74:0,15,385	1/1:21,4:24:29.30:452,29,0	1/1:27,1:27:24.39:434,24,0	0/0:35,0:34:33.55:0,34,461	0/0:12,0:11:14.96:0,15,221	0/1:32,0:25:2.22:145,0,2	0/1:18,0:18:0:0,0,0	1/1:22,0:22:3.40:58,3,0	1/1:21,0:20:15.01:239,15,0	1/1:24,0:24:21.55:262,22,0	0/0:29,0:29:29.77:0,30,532	0/0:31,0:31:57.18:0,57,862	1/1:18,0:14:7.45:70,7,0	0/1:32,0:31:17.75:140,0,18	1/1:26,0:24:21.08:175,21,0	./.	0/0:86,0:87:99:0,108,1458	1/1:23,1:23:1.81:37,2,0	1/1:9,1:10:2.43:71,2,0	0/1:23,3:26:10.44:397,0,10	0/1:22,0:22:18.19:18,0,345	0/1:17,0:17:36.88:70,0,37	1/1:14,0:13:3.13:35,3,0	1/1:6,0:6:3:25,3,0
chr10	87834897	.	TG	T	3148.84	PASS	AB=0.849;AC=29;AF=0.518;AN=56;BaseQRankSum=8.727;DP=664;FS=3.594;HRun=2;HaplotypeScore=111.5535;InbreedingCoeff=0.3424;MQ=44.18;MQ0=40;MQRankSum=-4.512;QD=8.24;ReadPosRankSum=-3.312;VQSLOD=0.0015;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:15,13:27:23.31:223,23,0	1/1:5,4:8:1.25:4,1,0	0/0:40,0:13:30.07:0,30,338	0/0:42,0:15:26.82:0,27,340	0/0:24,0:20:49.15:0,49,584	1/1:19,4:21:18.31:341,18,0	1/1:15,10:25:16.68:329,17,0	0/1:25,2:24:7.34:7,0,703	0/0:17,0:14:34.48:0,34,390	0/1:17,18:30:58.48:516,0,58	0/1:9,0:9:0:0,0,0	0/1:18,1:19:8.84:53,0,9	1/1:10,6:15:19.80:297,20,0	1/1:15,8:24:22.76:291,23,0	0/0:21,1:19:49.62:0,50,630	0/0:27,0:27:69.35:0,69,913	1/1:13,7:16:23.30:256,23,0	0/1:32,1:31:40.06:58,0,40	0/1:14,6:18:99:249,0,134	1/1:9,3:11:1.82:5,2,0	0/0:82,1:80:99:0,154,1937	1/1:11,4:14:11.08:142,11,0	0/1:6,2:9:6.04:66,0,6	0/1:18,5:21:22.19:126,0,22	0/0:20,1:20:7.20:0,7,429	0/1:11,7:17:99:232,0,199	1/1:5,9:12:14.87:139,15,0	0/0:6,0:6:2.50:0,2,9
chr10	87834898	.	G	GTGTG	2167.47	PASS	AB=0.775;AC=30;AF=0.556;AN=54;BaseQRankSum=5.566;DP=672;FS=2.585;HRun=0;HaplotypeScore=143.0707;InbreedingCoeff=0.4608;MQ=44.47;MQ0=40;MQRankSum=-2.451;QD=6.12;ReadPosRankSum=-0.260;VQSLOD=2.2247;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:24:1.34:0,1,4	0/1:6,0:9:0:0,0,0	0/0:38,0:12:17.97:0,18,217	0/0:42,0:14:7.73:0,8,144	0/0:24,0:20:14.74:0,15,385	1/1:21,0:21:29.38:452,29,0	1/1:26,0:27:21.24:415,21,0	0/0:27,0:24:33.08:0,33,460	0/0:17,0:14:14.65:0,15,221	1/1:28,0:31:1.31:81,1,0	0/1:1,0:9:0:0,0,0	1/1:5,1:22:3.40:58,3,0	1/1:10,0:15:15.01:239,15,0	1/1:19,0:23:21.83:262,22,0	0/0:22,0:19:29.77:0,30,532	0/0:27,0:27:57.18:0,57,862	1/1:10,0:17:7.35:69,7,0	0/1:7,0:33:3.47:71,0,3	1/1:13,0:15:14.92:65,15,0	./.	0/0:76,0:81:99:0,108,1458	1/1:7,0:14:2.21:37,2,0	1/1:9,0:10:2.43:71,2,0	0/1:22,0:22:10.18:397,0,10	0/1:21,0:21:18.19:18,0,345	0/1:15,0:17:38.86:46,0,39	1/1:11,0:13:2.64:34,3,0	1/1:1,0:8:3:25,3,0
chr10	87835538	.	AC	A	2955.92	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=4.623;DP=333;FS=3.017;HRun=9;HaplotypeScore=57.0815;InbreedingCoeff=0.9427;MQ=78.50;MQ0=0;MQRankSum=-2.580;QD=11.73;ReadPosRankSum=1.953;VQSLOD=2.8737;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:26:30.55:90,31,0	1/1:0,0:5:10.19:30,10,0	0/0:11,0:9:15.47:0,15,150	0/0:10,0:8:19.15:0,19,168	0/0:6,0:6:15.04:0,15,173	1/1:2,4:6:12:110,12,0	1/1:3,11:14:30.01:274,30,0	0/0:13,0:13:24.06:0,24,266	0/0:11,0:11:24.06:0,24,266	1/1:3,0:17:29.08:88,29,0	1/1:0,0:12:21.93:63,22,0	1/1:2,10:12:26.95:239,27,0	1/1:4,4:8:8.99:82,9,0	1/1:1,8:9:27.01:247,27,0	1/1:4,15:19:45.02:410,45,0	0/0:9,0:9:24.07:0,24,277	1/1:5,0:20:24.44:72,24,0	1/1:1,11:12:21.01:192,21,0	1/1:4,0:17:25.33:74,25,0	1/1:2,0:11:18.33:54,18,0	0/0:13,0:13:30.06:0,30,326	1/1:2,10:12:26.97:247,27,0	1/1:1,3:4:12.01:109,12,0	1/1:6,8:14:24.01:219,24,0	0/0:8,0:7:21.06:0,21,242	1/1:2,17:19:50.96:449,51,0	1/1:2,0:13:20.37:60,20,0	1/1:0,2:2:6:55,6,0
chr10	87835624	.	T	TC	1653.77	PASS	AB=0.853;AC=25;AF=0.463;AN=54;BaseQRankSum=-2.296;DP=415;FS=36.753;HRun=0;HaplotypeScore=43.9757;InbreedingCoeff=0.1292;MQ=42.31;MQ0=98;MQRankSum=0.728;QD=5.84;ReadPosRankSum=2.098;VQSLOD=1.5773;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,2:25:51.90:163,0,52	0/1:3,2:4:12.37:42,0,12	./.	0/0:13,0:6:14.29:0,14,91	0/0:8,0:7:14.83:0,15,112	1/1:8,0:5:11.04:56,11,0	0/1:12,0:8:23.96:24,0,30	0/0:22,0:21:43.05:0,43,330	0/0:10,0:4:11.96:0,12,111	1/1:12,4:15:7.51:194,8,0	1/1:8,1:8:9.10:81,9,0	0/1:11,1:6:14.68:71,0,15	0/0:7,0:4:0.52:0,1,3	0/1:7,0:7:25.05:40,0,25	0/0:14,0:10:23.32:0,23,192	0/0:13,0:10:24.72:0,25,193	1/1:20,3:15:22.58:194,23,0	0/1:23,1:13:11.58:56,0,12	1/1:15,2:13:27.06:193,27,0	0/1:10,5:13:13.35:135,0,13	0/0:11,0:8:22.10:0,22,171	0/1:5,10:14:24.86:79,0,25	0/1:6,3:7:5.02:83,0,5	1/1:10,2:9:3.58:61,4,0	0/0:11,0:8:23.95:0,24,227	0/1:20,1:16:47.08:146,0,47	1/1:18,3:15:19.53:170,20,0	0/1:15,0:8:45.44:45,0,50
chr10	87838534	.	C	CAAT	536.09	PASS	AC=20;AF=0.526;AN=38;BaseQRankSum=0.994;DP=295;FS=0.000;HRun=0;HaplotypeScore=70.8145;InbreedingCoeff=0.6530;MQ=60.91;MQ0=1;MQRankSum=-2.002;QD=4.39;ReadPosRankSum=-1.370;VQSLOD=1.5538;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:0.47:1,0,0	./.	1/1:12,0:12:0.89:2,1,0	./.	0/0:11,0:10:3.01:0,3,40	1/1:13,0:13:16.33:140,16,0	1/1:4,0:4:0.89:2,1,0	0/0:32,0:32:29.38:0,29,437	0/0:7,0:7:6.01:0,6,65	0/0:23,0:23:11.83:0,12,76	./.	1/1:6,0:6:5.83:33,6,0	./.	1/1:7,0:7:5.57:30,6,0	0/0:9,0:9:6.01:0,6,65	0/0:6,0:7:8.98:0,9,86	0/0:16,0:14:8.79:0,9,52	1/1:11,0:11:4.75:25,5,0	0/0:7,0:7:2.97:0,3,20	./.	./.	./.	./.	./.	1/1:5,10:15:12.04:234,12,0	1/1:17,0:17:9.35:89,9,0	0/0:14,0:14:14.64:0,15,87	1/1:14,0:14:13.72:119,14,0
chr10	87838541	.	AATAATAATAATAATAATAATAATAAT	A	867.79	PASS	AB=0.965;AC=8;AF=0.167;AN=48;BaseQRankSum=-2.555;DP=271;FS=0.000;HRun=0;HaplotypeScore=203.5131;InbreedingCoeff=0.1242;MQ=55.26;MQ0=1;MQRankSum=-0.421;QD=9.43;ReadPosRankSum=3.741;VQSLOD=2.5505;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,1:24:5.97:6,0,187	0/0:3,0:3:3.01:0,3,136	1/1:7,0:7:3.01:47,3,0	./.	0/0:7,0:6:9.02:0,9,746	0/0:13,0:13:30.10:0,30,1585	0/0:4,0:4:3.01:0,3,166	0/0:39,0:38:75.24:0,75,4360	0/0:7,0:7:12.04:0,12,633	0/1:22,1:23:99:673,0,313	1/1:7,1:8:3.01:51,3,0	0/0:4,0:4:9.03:0,9,364	./.	0/0:4,0:4:9.03:0,9,329	0/0:10,0:10:12.04:0,12,1156	0/0:6,0:6:12.04:0,12,1237	0/1:15,1:14:80.72:81,0,478	0/0:10,0:10:15.05:0,15,766	0/0:6,0:6:5.98:0,6,117	0/0:8,0:8:11.84:0,12,78	0/0:3,0:3:6.02:0,6,287	./.	0/0:3,0:3:3.01:0,3,237	./.	0/0:14,0:14:18.06:0,18,1769	0/0:14,0:14:24.08:0,24,916	0/1:14,0:14:99:129,0,884	0/0:17,0:17:36.06:0,36,1933
chr10	87838561	.	TAATAA	T	1640.96	PASS	AB=0.975;AC=21;AF=0.389;AN=54;BaseQRankSum=6.209;DP=274;FS=5.552;HRun=0;HaplotypeScore=109.0761;InbreedingCoeff=0.3167;MQ=44.08;MQ0=5;MQRankSum=-5.867;QD=10.19;ReadPosRankSum=0.834;VQSLOD=2.2998;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,2:21:13.57:119,0,14	1/1:4,0:4:9.01:86,9,0	0/1:9,0:2:0.86:11,0,1	0/0:17,0:4:8.25:0,8,58	0/0:4,0:3:9.03:0,9,239	0/1:13,0:13:24.37:24,0,279	0/0:3,0:3:1.94:0,2,26	0/0:47,0:45:73.22:0,73,1806	0/0:4,0:4:12.03:0,12,225	1/1:19,2:20:36:435,36,0	1/1:10,0:10:8.23:66,8,0	0/0:7,0:7:2.38:0,2,123	0/0:1,0:1:3:0,3,28	0/1:5,0:5:12.98:13,0,55	0/0:4,0:4:12.04:0,12,297	0/0:5,0:5:15.01:0,15,296	1/1:13,3:15:33.04:402,33,0	0/1:8,0:8:15.66:16,0,124	1/1:5,0:5:12:125,12,0	1/1:10,0:10:15.03:147,15,0	0/0:3,0:3:4.23:0,4,26	./.	0/0:2,0:2:5.91:0,6,78	0/0:1,0:1:3:0,3,28	0/0:13,0:13:21.06:0,21,485	0/1:11,0:11:49.37:49,0,200	1/1:11,1:11:17.89:286,18,0	0/1:15,0:15:40.07:40,0,438
chr10	87838565	.	AAT	A	2325.58	PASS	AB=0.887;AC=25;AF=0.463;AN=54;BaseQRankSum=4.158;DP=272;FS=4.434;HRun=0;HaplotypeScore=94.9942;InbreedingCoeff=0.3201;MQ=43.62;MQ0=5;MQRankSum=-6.266;QD=14.72;ReadPosRankSum=0.905;VQSLOD=3.0179;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:18.57:151,19,0	1/1:4,0:4:9.01:86,9,0	0/0:9,0:1:2.96:0,3,19	0/0:21,0:5:11.36:0,11,87	0/0:4,0:3:9.03:0,9,149	0/1:13,0:13:99:209,0,108	0/1:2,1:3:4.74:24,0,5	0/0:47,2:46:6.35:0,6,706	0/0:4,0:4:9.02:0,9,119	1/1:19,0:18:36.06:361,36,0	1/1:8,1:9:9.02:96,9,0	0/1:8,0:8:27.41:50,0,27	0/0:1,0:1:2.50:0,2,9	0/1:3,2:5:6.73:98,0,7	0/0:4,0:4:12.04:0,12,186	0/0:6,0:6:13.99:0,14,224	1/1:15,1:14:33.05:346,33,0	0/1:8,0:8:43.08:137,0,43	1/1:4,1:5:12.02:134,12,0	1/1:9,0:9:15.03:147,15,0	1/1:2,0:2:3.01:41,3,0	./.	0/0:2,0:2:2.51:0,3,18	0/0:2,0:2:2.74:0,3,12	0/0:12,0:12:18.05:0,18,227	0/1:9,1:10:37.95:130,0,38	1/1:12,0:11:33.08:373,33,0	0/1:12,3:15:99:125,0,136
chr10	87838567	.	T	TC	2663.26	PASS	AB=0.821;AC=25;AF=0.463;AN=54;BaseQRankSum=4.434;DP=276;FS=6.180;HRun=0;HaplotypeScore=95.6450;InbreedingCoeff=0.3273;MQ=43.68;MQ0=6;MQRankSum=-5.598;QD=17.18;ReadPosRankSum=1.303;VQSLOD=5.4215;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,7:17:11.21:275,11,0	1/1:1,3:4:9.03:143,9,0	0/0:11,0:1:2.94:0,3,18	0/0:21,0:5:11.81:0,12,86	0/0:5,0:4:9.03:0,9,126	0/1:6,0:14:99:127,0,108	0/1:5,0:6:15.79:19,0,16	0/0:51,0:48:77.48:0,77,1139	0/0:3,0:3:9.03:0,9,120	1/1:5,9:13:39.13:546,39,0	1/1:5,3:8:8.98:111,9,0	0/1:6,0:8:16.12:16,0,103	0/0:1,0:1:2.98:0,3,22	0/1:6,0:7:29.53:49,0,30	0/0:5,0:5:12.04:0,12,167	0/0:7,0:7:21:0,21,253	1/1:6,9:14:36.02:493,36,0	0/1:4,0:8:50.05:93,0,50	1/1:3,3:6:15.03:206,15,0	1/1:1,5:6:15.05:236,15,0	1/1:2,0:2:2.84:14,3,0	./.	0/0:2,0:2:5.86:0,6,37	0/0:2,0:2:5.86:0,6,37	0/0:13,0:13:20.94:0,21,195	0/1:9,0:10:39.12:39,0,98	1/1:6,7:12:36.01:456,36,0	0/1:17,0:15:24.65:25,0,211
chr10	87838572	.	T	TC	99.92	PASS	AB=0.712;AC=11;AF=0.204;AN=54;BaseQRankSum=1.470;DP=280;FS=5.946;HRun=0;HaplotypeScore=107.5659;InbreedingCoeff=0.2440;MQ=43.51;MQ0=7;MQRankSum=-4.803;QD=1.59;ReadPosRankSum=0.574;VQSLOD=1.8111;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:14.79:0,15,98	0/0:4,0:4:11.83:0,12,76	0/0:11,0:1:3.01:0,3,32	0/0:21,0:5:11.89:0,12,95	0/0:6,0:5:15.05:0,15,204	0/1:10,4:14:15.98:16,0,150	0/0:5,1:6:1.97:0,2,52	0/0:50,0:47:99:0,123,1666	0/0:2,0:2:6.02:0,6,83	0/0:14,0:13:36.26:0,36,193	0/0:8,0:8:8.57:0,9,47	0/1:1,6:7:4.12:42,0,4	1/1:0,1:1:2.50:9,2,0	0/1:7,1:8:4.28:4,0,56	0/0:5,0:5:15.05:0,15,210	0/0:8,0:8:24.07:0,24,318	0/0:15,0:14:32.02:0,32,201	0/0:8,0:8:20.84:0,21,175	0/0:8,0:7:17.51:0,18,122	0/0:6,0:6:14.61:0,15,92	0/0:2,0:2:3.01:0,3,38	./.	1/1:0,2:2:4.63:16,5,0	1/1:0,2:2:4.07:12,4,0	0/0:14,0:14:21.07:0,21,294	0/1:5,5:11:36.09:36,0,47	0/0:12,0:11:34.81:0,35,209	0/1:9,9:16:11.93:96,0,12
chr10	87838573	.	A	ATC	660.72	PASS	AB=0.845;AC=16;AF=0.296;AN=54;BaseQRankSum=3.670;DP=286;FS=3.077;HRun=0;HaplotypeScore=111.7335;InbreedingCoeff=0.1425;MQ=43.36;MQ0=9;MQRankSum=-5.354;QD=6.35;ReadPosRankSum=0.594;VQSLOD=2.9410;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:9.97:0,10,30	0/0:4,0:4:7.18:0,7,21	0/0:11,0:1:2.84:0,3,14	0/0:21,0:5:10.71:0,11,64	0/0:6,0:5:14.97:0,15,192	0/1:10,4:14:88.94:89,0,158	0/1:5,1:6:18.08:18,0,37	0/0:50,0:47:99:0,123,1800	0/0:2,0:2:6.02:0,6,84	0/1:16,0:14:12.48:39,0,12	0/0:8,0:8:4.59:0,5,15	0/1:1,6:7:12.72:116,0,13	1/1:1,1:2:2.98:22,3,0	0/1:8,1:9:31.39:31,0,38	0/0:5,0:5:15.05:0,15,239	0/0:8,0:8:24.07:0,24,362	0/0:16,0:15:13.44:0,13,73	0/1:8,0:8:1.21:1,0,237	0/1:9,0:7:12.81:13,0,61	0/0:6,0:6:7.94:0,8,27	0/0:2,0:2:3.01:0,3,31	./.	1/1:0,2:2:5.94:42,6,0	1/1:0,2:2:5.91:38,6,0	0/0:13,0:13:24.07:0,24,369	0/1:6,5:11:21.16:106,0,21	0/0:12,0:11:10.57:0,11,32	1/1:9,9:16:26.16:302,26,0
chr10	87838578	.	TA	T	282.27	PASS	AB=0.856;AC=7;AF=0.130;AN=54;BaseQRankSum=-1.300;DP=304;FS=6.649;HRun=2;HaplotypeScore=112.3365;InbreedingCoeff=-0.1882;MQ=44.10;MQ0=9;MQRankSum=-1.982;QD=3.76;ReadPosRankSum=-0.144;VQSLOD=0.1407;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:23.98:0,24,214	0/0:4,0:4:12.02:0,12,118	0/0:13,0:3:9.03:0,9,122	0/0:24,0:8:5.64:0,6,137	0/0:7,0:6:18.06:0,18,257	0/1:9,6:15:83.65:137,0,84	0/1:6,1:7:26.61:27,0,63	0/0:47,0:44:99:0,102,1422	0/0:2,0:2:6.02:0,6,87	0/0:16,0:14:38.19:0,38,332	0/0:9,0:9:7.76:0,8,65	0/1:6,1:7:13.62:14,0,74	0/0:2,0:2:2.90:0,3,16	0/1:7,1:9:24.93:25,0,44	0/0:5,0:5:15.05:0,15,225	0/0:10,0:10:30.09:0,30,422	0/0:16,0:15:36:0,36,341	0/1:5,3:8:30.79:136,0,31	0/0:9,0:7:17.99:0,18,174	0/0:6,0:6:15.03:0,15,146	0/0:3,0:3:6.02:0,6,81	./.	0/0:2,0:2:5.86:0,6,35	0/0:3,0:3:5.91:0,6,39	0/0:14,0:14:24.08:0,24,355	0/1:8,1:9:47.86:48,0,76	0/0:14,0:13:39.85:0,40,348	0/1:20,0:18:22.35:22,0,161
chr10	87838831	.	TAA	T	2424.04	PASS	AB=0.611;AC=34;AF=0.630;AN=54;BaseQRankSum=8.888;DP=407;FS=1.772;HRun=14;HaplotypeScore=68.0331;InbreedingCoeff=0.6969;MQ=55.13;MQ0=20;MQRankSum=1.963;QD=10.36;ReadPosRankSum=5.479;VQSLOD=2.0794;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,18:25:53.89:476,54,0	1/1:3,4:8:14.78:123,15,0	0/0:47,0:5:8.99:0,9,90	0/0:47,0:8:12.41:0,12,107	./.	0/1:4,0:20:13.25:27,0,13	0/1:3,0:5:6.78:19,0,7	0/0:23,0:23:57.09:0,57,717	0/0:6,0:7:21.01:0,21,257	1/1:2,12:14:35.96:321,36,0	1/1:4,13:17:38.89:347,39,0	1/1:1,0:10:9.75:26,10,0	0/0:0,0:2:1.36:0,1,3	1/1:1,0:9:13.75:38,14,0	0/0:12,0:12:26.93:0,27,298	0/0:15,0:15:38.44:0,38,466	1/1:8,21:27:12.41:402,12,0	1/1:3,0:27:29.84:79,30,0	1/1:5,10:18:35.50:290,36,0	1/1:1,3:4:9.01:83,9,0	0/0:9,0:9:18.01:0,18,214	1/1:0,0:2:2.04:6,2,0	1/1:3,0:4:0.93:20,1,0	1/1:1,0:1:1.82:5,2,0	0/0:9,0:9:27.03:0,27,339	1/1:1,0:12:21.48:68,21,0	1/1:4,12:15:29.96:266,30,0	1/1:0,0:7:7.49:20,7,0
chr10	87841442	.	G	GGC	1056.38	PASS	AB=0.949;AC=7;AF=0.125;AN=56;BaseQRankSum=10.283;DP=433;FS=9.960;HRun=0;HaplotypeScore=95.6266;InbreedingCoeff=0.0218;MQ=72.11;MQ0=0;MQRankSum=-9.059;QD=10.89;ReadPosRankSum=-1.703;VQSLOD=2.2182;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,3:35:99:445,0,309	0/0:3,0:3:6.02:0,6,88	0/0:8,0:8:9.56:0,10,271	0/0:9,0:9:7.59:0,8,224	0/0:4,0:4:12.04:0,12,177	0/0:13,0:13:39.13:0,39,572	0/0:32,0:32:93.31:0,93,1368	0/0:9,0:9:24.06:0,24,333	0/0:14,0:14:36.12:0,36,530	0/1:9,2:11:99:109,0,152	0/0:3,0:3:3.01:0,3,44	0/0:25,0:25:72.24:0,72,1057	0/0:10,0:10:24.08:0,24,353	0/0:11,0:11:25.64:0,26,357	0/0:12,0:12:36.12:0,36,527	0/0:11,0:11:30.10:0,30,442	0/1:26,0:26:99:132,0,213	0/0:31,0:31:87.29:0,87,1275	0/1:11,0:11:99:142,0,231	1/1:2,0:2:2.94:18,3,0	0/0:59,0:59:99:0,166,2409	0/0:10,0:10:27.09:0,27,391	0/0:10,0:10:30.10:0,30,439	0/0:45,0:45:99:0,123,1781	0/0:3,0:3:9.02:0,9,113	0/0:10,0:10:2.79:0,3,288	0/1:12,0:12:50.55:335,0,51	0/0:4,0:4:9.03:0,9,133
chr10	87841452	.	G	GGCGC	1914.99	PASS	AB=0.847;AC=10;AF=0.179;AN=56;BaseQRankSum=6.930;DP=413;FS=13.572;HRun=0;HaplotypeScore=102.2030;InbreedingCoeff=-0.0326;MQ=75.87;MQ0=0;MQRankSum=-6.896;QD=15.32;ReadPosRankSum=-2.402;VQSLOD=2.0507;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,19:36:99:953,0,133	0/1:4,0:4:18.51:19,0,32	0/0:11,0:11:21.35:0,21,483	0/0:9,0:9:27.03:0,27,386	0/0:4,0:4:12.04:0,12,238	0/0:10,0:10:25.20:0,25,239	0/0:28,0:28:29.43:0,29,658	0/0:11,0:11:33.11:0,33,649	0/0:12,0:12:36.12:0,36,731	0/1:13,2:15:99:192,0,188	0/0:4,0:4:9.01:0,9,83	0/0:25,0:25:73.05:0,73,773	0/0:11,0:11:33.08:0,33,354	0/1:9,0:9:22.91:23,0,192	0/0:9,0:9:27.08:0,27,524	0/0:9,0:9:24.08:0,24,489	0/1:11,9:20:5.90:438,0,6	0/0:29,0:29:87.18:0,87,884	0/1:17,1:18:99:100,0,250	1/1:0,1:1:3.01:62,3,0	0/0:55,0:55:99:0,160,3224	0/0:10,0:10:30.07:0,30,322	0/0:9,0:9:2.07:0,2,224	0/0:36,0:36:45.89:0,46,851	0/0:3,0:3:9.03:0,9,182	0/1:10,1:11:25.74:26,0,255	0/1:6,5:11:99:244,0,113	0/0:3,0:3:9.02:0,9,93
chr10	87841453	.	A	AGG	814.54	PASS	AB=0.803;AC=8;AF=0.143;AN=56;BaseQRankSum=7.170;DP=418;FS=5.228;HRun=1;HaplotypeScore=90.8386;InbreedingCoeff=0.0091;MQ=75.57;MQ0=0;MQRankSum=-6.664;QD=8.23;ReadPosRankSum=-0.862;VQSLOD=-0.0517;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,19:36:99:432,0,117	0/0:6,0:6:8.14:0,8,49	0/0:11,0:11:25.83:0,26,403	0/0:9,0:9:20.22:0,20,327	0/0:4,0:4:12.04:0,12,195	0/0:11,0:11:29.56:0,30,198	0/0:28,0:28:82.67:0,83,533	0/0:11,0:11:33.11:0,33,516	0/0:12,0:12:36.12:0,36,567	0/1:13,2:15:99:142,0,132	0/1:4,0:4:16.16:16,0,25	0/0:25,0:25:49.02:0,49,467	0/0:11,0:11:7.17:0,7,165	0/0:9,0:9:26.62:0,27,175	0/0:9,0:9:27.07:0,27,412	0/0:9,0:9:24.55:0,25,391	0/1:12,9:21:41.76:199,0,42	0/0:29,0:29:85.51:0,86,544	0/0:16,1:17:6.20:0,6,209	1/1:1,0:2:3:28,3,0	0/0:55,0:55:99:0,163,2584	0/0:10,0:10:29.56:0,30,204	0/0:10,0:10:26.58:0,27,172	0/0:36,0:36:69.53:0,70,588	0/0:4,0:4:9:0,9,120	0/1:10,1:11:28.04:28,0,133	0/1:5,5:10:99:101,0,102	0/0:3,0:3:8.87:0,9,58
chr10	87841640	.	CTTT	C	3082	PASS	AB=0.727;AC=39;AF=0.696;AN=56;BaseQRankSum=3.430;DP=485;FS=1.712;HRun=19;HaplotypeScore=82.0855;InbreedingCoeff=0.8242;MQ=74.11;MQ0=9;MQRankSum=-3.411;QD=11.37;ReadPosRankSum=6.351;VQSLOD=-0.1423;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,6:28:22.34:212,22,0	1/1:5,3:8:5.44:56,5,0	0/0:65,0:18:12.82:0,13,93	0/0:46,0:23:21.48:0,21,197	0/0:9,0:12:27.04:0,27,358	1/1:2,8:11:17.73:157,18,0	1/1:7,5:13:7.06:81,7,0	0/0:29,0:39:83.56:0,84,1131	0/0:7,0:12:23.51:0,24,275	1/1:7,3:11:6.96:80,7,0	1/1:6,9:16:26.33:240,26,0	1/1:9,5:16:17.11:145,17,0	1/1:1,9:12:25.36:238,25,0	1/1:3,7:10:11.75:111,12,0	0/1:5,1:8:7:7,0,178	0/0:8,0:10:22.29:0,22,272	1/1:7,10:20:23.40:235,23,0	1/1:4,14:23:38.53:353,39,0	1/1:5,1:12:19.65:119,20,0	1/1:5,0:14:13.64:87,14,0	0/0:6,0:8:18.03:0,18,263	1/1:2,3:7:10.32:101,10,0	1/1:3,2:9:8.53:95,9,0	1/1:1,11:13:29.84:269,30,0	0/0:14,0:18:31.30:0,31,405	1/1:2,12:16:41.77:372,42,0	1/1:2,0:7:3.95:31,4,0	1/1:1,13:17:14.78:300,15,0
chr10	87842194	.	G	GC	495.77	PASS	AB=0.808;AC=24;AF=0.480;AN=50;BaseQRankSum=5.056;DP=226;FS=2.560;HRun=8;HaplotypeScore=42.0406;InbreedingCoeff=0.5852;MQ=93.48;MQ0=0;MQRankSum=-1.753;QD=5.97;ReadPosRankSum=-3.323;VQSLOD=-0.7072;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:4,8:12:2.45:137,0,2	./.	0/0:16,0:16:11.69:0,12,254	0/0:11,0:11:16.03:0,16,109	0/0:16,0:16:42.02:0,42,384	1/1:5,0:6:2.37:14,2,0	1/1:9,0:13:17.93:107,18,0	0/0:15,0:15:33:0,33,302	0/1:10,1:11:4.60:5,0,217	0/0:6,0:6:11.51:0,12,62	0/0:4,0:4:8.31:0,8,39	1/1:3,0:5:5.18:38,5,0	0/1:1,0:1:0:0,0,0	1/1:5,0:5:2.75:12,3,0	0/0:11,0:12:29.04:0,29,253	0/0:16,0:16:42:0,42,380	0/0:14,0:14:29.45:0,29,173	1/1:4,0:5:3.65:17,4,0	1/1:5,1:6:5.93:52,6,0	0/1:3,2:5:9.70:29,0,10	0/0:11,0:11:30.02:0,30,275	1/1:1,0:1:2.90:16,3,0	./.	./.	0/0:14,0:14:36:0,36,324	1/1:3,0:4:3.14:9,3,0	1/1:0,4:4:12.03:131,12,0	1/1:1,2:5:11.73:98,12,0
chr10	87842374	.	A	AGT	12598.44	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=2.555;DP=459;FS=9.972;HRun=0;HaplotypeScore=74.8708;InbreedingCoeff=0.9479;MQ=89.93;MQ0=1;MQRankSum=-2.714;QD=45.98;ReadPosRankSum=2.430;VQSLOD=6.0630;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:69.24:1263,69,0	1/1:0,4:5:12.01:185,12,0	0/0:14,0:14:36.57:0,37,511	0/0:24,0:24:10.19:0,10,630	0/0:10,0:10:30.10:0,30,425	1/1:3,9:12:24.08:439,24,0	1/1:2,28:30:81.25:1451,81,0	0/0:18,0:18:51.16:0,51,716	0/0:16,0:16:48.14:0,48,668	1/1:3,10:13:33.11:603,33,0	1/1:1,5:8:21.07:375,21,0	1/1:1,13:14:36.12:645,36,0	1/1:1,9:10:30.10:529,30,0	1/1:1,16:18:48.16:867,48,0	0/0:18,0:18:48.16:0,48,688	0/0:20,0:20:57.19:0,57,817	1/1:1,36:37:96.33:1759,96,0	1/1:1,12:14:33.11:604,33,0	1/1:0,14:14:42.14:770,42,0	1/1:0,3:3:9.03:165,9,0	0/0:55,0:55:99:0,156,2197	1/1:1,3:4:6.02:110,6,0	1/1:1,3:4:9.03:164,9,0	1/1:1,20:23:54.19:987,54,0	0/0:10,0:10:27.08:0,27,369	1/1:0,18:18:51.15:866,51,0	1/1:2,10:11:33.11:596,33,0	1/1:0,4:4:12.04:220,12,0
chr10	87842651	.	TG	T	7119.71	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.405;DP=626;FS=12.641;HRun=5;HaplotypeScore=67.1261;InbreedingCoeff=0.9993;MQ=84.67;MQ0=0;MQRankSum=-2.128;QD=30.82;ReadPosRankSum=2.307;VQSLOD=4.7000;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,48:49:99:1565,138,0	1/1:0,9:9:27.08:305,27,0	0/0:16,0:16:42.12:0,42,534	0/0:24,0:24:63.16:0,63,820	0/0:12,0:12:36.11:0,36,470	0/0:19,0:19:54.18:0,54,736	0/0:30,0:30:81.24:0,81,1076	0/0:25,0:25:66.16:0,66,853	0/0:23,0:23:66.22:0,66,902	1/1:0,22:22:66.17:737,66,0	1/1:0,13:13:39.11:442,39,0	0/0:24,0:24:69.22:0,69,921	0/0:10,0:10:30.10:0,30,408	0/0:17,0:17:39.13:0,39,532	0/0:23,0:23:69.23:0,69,943	0/0:19,0:19:54.17:0,54,723	1/1:3,46:49:99:1565,138,0	0/0:29,0:29:81.27:0,81,1106	1/1:7,13:20:39.08:430,39,0	1/1:0,14:14:39.11:442,39,0	0/0:55,0:55:99:0,153,2040	0/0:10,0:10:24.08:0,24,328	0/0:10,0:10:30.10:0,30,410	0/0:31,0:31:81.25:0,81,1087	0/0:18,0:18:51.16:0,51,682	1/1:4,18:22:54.15:613,54,0	1/1:0,16:16:48.14:544,48,0	1/1:0,17:17:42.12:476,42,0
chr10	87843245	.	C	CT	1900.08	PASS	AB=0.549;AC=8;AF=0.143;AN=56;BaseQRankSum=-4.339;DP=228;FS=0.000;HRun=3;HaplotypeScore=27.0351;InbreedingCoeff=0.6329;MQ=73.55;MQ0=0;MQRankSum=-0.320;QD=30.16;ReadPosRankSum=0.109;VQSLOD=2.4895;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:24.08:0,24,297	0/0:1,0:1:3.01:0,3,37	0/0:9,0:8:21.05:0,21,246	0/0:9,0:8:21.04:0,21,232	0/0:15,0:15:39.12:0,39,474	0/0:9,0:9:23.89:0,24,297	0/0:8,0:8:17.27:0,17,221	0/0:8,0:6:15.52:0,16,187	0/0:6,0:6:18.04:0,18,210	0/0:8,0:6:18.06:0,18,223	0/0:7,0:7:15.48:0,15,156	0/0:5,0:5:12.04:0,12,148	0/0:5,0:5:15.05:0,15,185	0/0:6,0:6:16.86:0,17,189	0/0:8,0:8:21.07:0,21,260	0/0:5,0:5:15.03:0,15,173	0/0:7,0:7:14.84:0,15,162	0/0:5,0:5:12.04:0,12,149	1/1:4,13:17:8.29:556,8,0	0/1:4,11:14:25.48:379,0,25	0/0:13,0:12:29.04:0,29,336	0/0:5,0:5:14.99:0,15,150	0/0:10,0:10:30.07:0,30,343	0/0:3,0:3:5.85:0,6,48	0/0:4,0:4:8.92:0,9,90	1/1:0,14:14:42.13:581,42,0	0/1:1,11:12:1.79:358,0,2	1/1:1,4:5:12.04:173,12,0
chr10	87843689	.	TAAA	T	1075.31	PASS	AB=0.627;AC=10;AF=0.179;AN=56;BaseQRankSum=2.961;DP=353;FS=3.372;HRun=15;HaplotypeScore=55.5459;InbreedingCoeff=0.5082;MQ=67.42;MQ0=2;MQRankSum=2.327;QD=11.95;ReadPosRankSum=4.853;VQSLOD=0.3241;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,23:30:47.97:522,48,0	1/1:1,2:3:2.99:34,3,0	0/0:27,0:13:27.09:0,27,392	0/0:14,0:10:18.35:0,18,219	0/0:8,0:8:18.04:0,18,258	0/0:9,0:12:30.05:0,30,425	0/0:18,1:19:2.65:0,3,444	0/0:18,0:18:39.13:0,39,642	0/0:8,0:12:27.05:0,27,413	1/1:4,1:5:2.96:34,3,0	0/1:5,2:9:9.23:58,0,9	0/0:2,0:2:3.01:0,3,55	0/0:5,0:5:12.04:0,12,200	0/0:2,0:2:3:0,3,25	0/0:13,0:15:42.09:0,42,612	0/0:9,0:9:24.06:0,24,347	1/1:3,21:25:50.98:556,51,0	0/0:20,0:20:51.16:0,51,824	0/0:4,0:10:9.20:0,9,34	0/1:4,1:18:20.47:20,0,30	0/0:14,0:15:36.12:0,36,621	0/0:4,0:5:12.04:0,12,168	0/0:2,0:2:3.01:0,3,42	0/0:13,0:17:39.07:0,39,574	0/0:8,0:8:18.04:0,18,290	0/0:6,0:16:26.48:0,26,188	0/0:9,0:16:3.74:0,4,8	0/0:6,0:9:11.97:0,12,124
chr10	87844165	.	CCAAA	C	4376.37	PASS	AB=0.975;AC=35;AF=0.625;AN=56;BaseQRankSum=-7.872;DP=421;FS=6.492;HRun=0;HaplotypeScore=83.1030;InbreedingCoeff=-0.5811;MQ=60.02;MQ0=8;MQRankSum=3.875;QD=10.40;ReadPosRankSum=-2.400;VQSLOD=2.4428;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:29:70.09:575,70,0	1/1:7,0:7:20.92:194,21,0	0/1:25,0:10:18.46:129,0,18	0/1:26,0:7:19.74:30,0,20	0/1:8,0:8:29.94:62,0,30	0/1:12,0:12:87.69:88,0,127	0/1:16,0:16:47.98:48,0,150	0/1:27,0:27:99:341,0,113	0/1:10,0:10:47.99:126,0,48	1/1:11,0:12:25.98:219,26,0	1/1:0,8:8:17.48:101,17,0	0/1:15,0:15:99:103,0,103	0/1:10,0:10:74.30:76,0,74	0/1:9,0:9:56.75:77,0,57	1/1:8,1:9:19.25:161,19,0	0/1:22,0:22:53.84:280,0,54	1/1:21,0:21:54.57:530,55,0	0/1:25,0:23:97.41:97,0,209	0/1:2,0:5:28.57:76,0,29	1/1:13,0:13:19.86:170,20,0	0/1:15,0:15:27.89:157,0,28	0/1:5,0:4:15.12:16,0,15	0/1:8,0:7:19.35:53,0,19	0/1:20,0:19:99:101,0,121	0/1:11,0:11:37.37:88,0,37	0/1:12,0:12:95.82:124,0,96	0/1:10,0:12:2.85:109,0,3	0/1:28,0:27:99:243,0,123
chr10	87844332	.	T	TG	4086.38	PASS	AB=0.579;AC=19;AF=0.339;AN=56;BaseQRankSum=-9.134;DP=437;FS=1.348;HRun=6;HaplotypeScore=47.2684;InbreedingCoeff=0.8986;MQ=89.19;MQ0=0;MQRankSum=0.920;QD=29.40;ReadPosRankSum=2.659;VQSLOD=4.1751;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:57.18:717,57,0	1/1:1,0:1:3.01:38,3,0	0/0:21,0:21:44.04:0,44,409	0/0:21,0:21:39.54:0,40,376	0/0:14,0:14:30.05:0,30,299	0/0:17,0:17:48.11:0,48,489	0/0:18,0:18:51.07:0,51,506	0/0:17,0:17:42.09:0,42,427	0/0:7,0:7:18.04:0,18,183	1/1:4,13:17:39.10:465,39,0	1/1:1,9:10:27.09:338,27,0	0/0:11,0:11:30.07:0,30,306	0/0:10,0:10:27.06:0,27,274	0/0:9,0:9:24.03:0,24,234	0/0:11,0:11:24.05:0,24,244	0/0:20,0:20:57.12:0,57,575	1/1:0,32:32:87.28:1094,87,0	0/0:14,0:14:39.09:0,39,398	1/1:0,7:7:21.07:262,21,0	1/1:1,13:14:39.12:486,39,0	0/0:39,0:39:99:0,105,1071	0/0:14,0:14:36.08:0,36,367	0/0:18,0:18:51.08:0,51,509	0/0:24,0:24:60.13:0,60,611	0/0:13,0:13:39.09:0,39,397	0/1:3,8:11:3.53:275,0,4	1/1:2,11:13:27.08:335,27,0	1/1:1,3:4:6.02:75,6,0
chr10	87845197	.	TATTATC	T	1640.70	PASS	AB=0.991;AC=21;AF=0.375;AN=56;BaseQRankSum=5.674;DP=304;FS=4.519;HRun=0;HaplotypeScore=59.0086;InbreedingCoeff=0.0488;MQ=75.90;MQ0=0;MQRankSum=-4.298;QD=9.43;ReadPosRankSum=-1.084;VQSLOD=1.2812;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:26:1.15:298,1,0	1/1:2,0:2:5.99:48,6,0	0/0:12,0:11:21.01:0,21,276	0/0:10,0:9:11.18:0,11,147	0/0:11,0:11:32.79:0,33,355	0/1:21,0:21:82.90:331,0,83	0/1:4,0:4:15.97:80,0,16	0/0:24,0:24:63.06:0,63,966	0/0:8,0:8:23.72:0,24,470	1/1:8,0:8:7.21:114,7,0	1/1:8,0:8:6.13:93,6,0	0/1:10,0:10:70.38:70,0,81	0/1:13,0:13:96.91:144,0,97	0/1:9,0:9:74.96:130,0,75	0/0:7,0:7:21.03:0,21,429	0/0:6,0:6:18.06:0,18,627	0/0:25,0:25:13.32:0,13,42	0/1:16,0:16:69.92:144,0,70	0/1:6,0:6:34.54:88,0,35	0/1:6,0:6:71.67:72,0,100	0/0:11,0:11:30.04:0,30,642	0/0:6,0:6:8.99:0,9,75	0/1:11,0:11:58.60:59,0,170	0/0:3,0:3:5.99:0,6,48	0/0:7,0:7:18.02:0,18,353	1/1:8,0:8:7.70:93,8,0	0/1:17,0:17:40.44:40,0,582	0/1:8,1:9:6.49:11,0,6
chr10	87845200	.	TATC	T	1640.01	PASS	AB=0.991;AC=23;AF=0.411;AN=56;BaseQRankSum=8.076;DP=292;FS=3.275;HRun=0;HaplotypeScore=41.9186;InbreedingCoeff=0.4392;MQ=69.43;MQ0=1;MQRankSum=-3.723;QD=10.19;ReadPosRankSum=0.546;VQSLOD=2.7645;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:22.01:198,22,0	1/1:2,0:2:5.99:48,6,0	0/0:8,0:7:21.01:0,21,240	0/0:9,0:8:11.18:0,11,147	0/0:11,0:11:32.77:0,33,287	0/1:21,0:21:24.30:24,0,95	0/1:4,0:4:5.06:5,0,18	0/0:24,0:24:59.64:0,60,767	0/0:8,0:8:23.70:0,24,316	1/1:0,8:8:23.99:250,24,0	1/1:9,0:9:27:274,27,0	0/0:10,0:10:6.23:0,6,90	0/1:13,0:13:18.60:19,0,99	0/1:9,0:9:18.72:19,0,78	0/0:7,0:7:21.02:0,21,305	0/0:6,0:6:18.06:0,18,413	1/1:0,22:22:18.06:305,18,0	0/0:15,0:15:6.40:0,6,85	1/1:7,0:6:15.01:155,15,0	0/1:6,0:6:36.10:77,0,36	0/0:10,0:10:30.03:0,30,446	0/0:4,0:4:8.99:0,9,75	0/0:12,0:12:18.15:0,18,191	0/1:3,0:3:7.98:8,0,39	0/0:7,0:7:21:0,21,263	1/1:0,8:8:21.88:224,22,0	0/1:14,1:15:99:113,0,239	1/1:2,7:9:8.96:120,9,0
chr10	87845203	.	CATTATT	C	1645.79	PASS	AB=1.000;AC=17;AF=0.327;AN=52;BaseQRankSum=1.339;DP=281;FS=8.433;HRun=0;HaplotypeScore=54.3512;InbreedingCoeff=0.6693;MQ=66.49;MQ0=2;MQRankSum=-8.104;QD=15.24;ReadPosRankSum=0.796;VQSLOD=1.2372;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:33.78:164,0,34	0/0:2,0:2:0.89:0,1,2	0/0:7,0:6:3.01:0,3,98	./.	0/0:10,0:10:9.01:0,9,159	1/1:5,16:21:27.09:534,27,0	1/1:1,3:4:6.02:124,6,0	0/0:24,0:24:42.09:0,42,751	0/0:8,0:8:15.04:0,15,372	0/0:8,0:8:7.26:0,7,65	0/0:9,0:9:12.47:0,12,111	1/1:4,6:10:6.02:124,6,0	1/1:5,7:12:12.04:242,12,0	1/1:4,5:9:12.04:224,12,0	0/0:7,0:7:12.04:0,12,342	0/0:6,0:6:18.06:0,18,571	0/0:23,0:23:21.02:0,21,207	1/1:4,10:14:12.04:249,12,0	0/0:6,0:5:6.02:0,6,104	0/0:6,0:6:7.84:0,8,174	0/0:9,0:9:18.04:0,18,467	./.	1/1:7,4:11:6.02:124,6,0	1/1:3,0:3:3.01:34,3,0	0/0:7,0:7:12.04:0,12,344	0/0:8,0:8:10.71:0,11,90	0/0:14,0:14:33.09:0,33,891	0/0:8,0:8:6.01:0,6,63
chr10	87845581	.	G	GAACA	4226.49	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=0.472;DP=424;FS=5.459;HRun=0;HaplotypeScore=75.9691;InbreedingCoeff=0.9103;MQ=59.39;MQ0=1;MQRankSum=-5.989;QD=44.49;ReadPosRankSum=0.650;VQSLOD=4.9402;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:33.11:0,33,529	1/1:4,2:6:12.04:289,12,0	0/0:17,0:15:7.20:0,7,156	0/0:8,0:6:15.05:0,15,223	0/0:13,0:13:33.11:0,33,527	0/0:19,0:19:45.15:0,45,713	0/0:11,0:11:30.10:0,30,472	0/0:31,0:31:39.13:0,39,627	0/0:16,0:16:30.10:0,30,483	1/1:6,10:16:27.09:650,27,0	1/1:5,5:10:30.10:623,30,0	0/0:10,0:10:21.07:0,21,338	0/0:4,0:4:6.02:0,6,97	0/0:12,0:12:27.09:0,27,435	0/0:27,0:27:60.20:0,60,961	0/0:17,0:17:30.10:0,30,483	1/1:14,7:21:30.52:624,31,0	0/0:23,0:23:41.28:0,41,763	0/0:20,0:20:30.08:0,30,448	0/0:2,0:2:6.02:0,6,97	0/0:3,0:3:6.02:0,6,97	0/0:7,0:7:18.06:0,18,290	0/0:13,0:13:39.12:0,39,601	0/0:17,0:17:36.12:0,36,565	0/0:19,0:19:48.14:0,48,726	1/1:10,10:20:36.12:844,36,0	0/0:19,0:20:42.04:0,42,638	1/1:9,13:22:51.18:1196,51,0
chr10	87845623	.	C	CTT	2657.36	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=6.569;DP=369;FS=11.320;HRun=11;HaplotypeScore=65.0419;InbreedingCoeff=0.8231;MQ=61.05;MQ0=4;MQRankSum=-6.128;QD=17.60;ReadPosRankSum=0.905;VQSLOD=1.2295;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:20.87:174,21,0	1/1:7,0:7:12.48:113,12,0	0/0:10,0:8:14.83:0,15,124	0/0:10,0:6:2.98:0,3,29	0/0:18,0:18:44.96:0,45,417	0/0:18,0:18:45.05:0,45,435	0/0:10,0:10:18:0,18,175	0/0:33,0:29:62.94:0,63,592	0/0:10,0:9:17.98:0,18,175	1/1:12,0:12:21.02:195,21,0	1/1:13,0:13:30.04:281,30,0	0/0:4,0:4:8.99:0,9,82	0/0:4,0:4:5.98:0,6,58	0/0:7,0:7:21.03:0,21,204	0/0:17,0:17:29.99:0,30,290	0/0:11,0:11:27.02:0,27,260	1/1:12,1:12:30.04:296,30,0	0/0:24,0:24:54.07:0,54,523	1/1:12,12:22:7.02:448,7,0	1/1:2,2:4:6.02:87,6,0	0/0:3,0:3:9:0,9,81	0/0:7,0:7:11.97:0,12,107	0/0:11,0:11:25.21:0,25,219	0/1:11,0:11:29.96:30,0,75	0/0:21,0:21:41.94:0,42,400	1/1:13,0:13:21.04:217,21,0	1/1:3,14:18:35.50:486,36,0	1/1:20,1:21:52.42:540,52,0
chr10	87845634	.	T	TTTTA	3574.43	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=7.663;DP=334;FS=8.466;HRun=0;HaplotypeScore=61.7617;InbreedingCoeff=0.7008;MQ=54.70;MQ0=12;MQRankSum=-4.706;QD=26.88;ReadPosRankSum=0.941;VQSLOD=2.4166;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:13:21.07:476,21,0	1/1:0,4:4:12.04:317,12,0	0/0:7,0:5:14.89:0,15,171	0/0:5,0:2:3.01:0,3,52	0/0:17,0:17:48.10:0,48,741	0/0:20,0:20:48.08:0,48,783	0/0:7,0:6:18.06:0,18,315	0/0:34,0:24:72.10:0,72,1082	0/0:7,0:6:18.06:0,18,315	1/1:2,6:8:24.03:518,24,0	1/1:0,13:14:30.10:771,30,0	0/0:4,0:4:9.02:0,9,130	0/0:3,0:3:8.39:0,8,113	0/0:8,0:8:21.07:0,21,367	0/0:12,0:12:33.04:0,33,523	0/0:10,0:10:27.09:0,27,467	1/1:2,10:12:30.09:707,30,0	0/0:26,0:24:57.13:0,57,955	0/1:19,0:16:38.42:38,0,99	1/1:5,0:5:3.63:10,4,0	0/0:5,0:3:9.01:0,9,129	0/0:6,0:6:12.01:0,12,175	0/0:12,0:12:24.05:0,24,361	0/1:10,0:9:3.62:4,0,193	0/0:18,0:18:45.08:0,45,713	1/1:1,0:12:32.84:270,33,0	0/1:15,0:15:9.51:28,0,10	1/1:3,0:19:49.78:436,50,0
chr10	87846597	.	AACAC	A	208.05	PASS	AB=1.000;AC=21;AF=0.656;AN=32;BaseQRankSum=0.973;DP=489;FS=6.037;HRun=0;HaplotypeScore=97.8553;InbreedingCoeff=0.2247;MQ=56.17;MQ0=24;MQRankSum=0.417;QD=0.92;ReadPosRankSum=0.655;VQSLOD=1.1477;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:49,0:42:3:28,3,0	./.	./.	./.	0/0:13,0:13:5.86:0,6,38	1/1:18,0:18:5.97:46,6,0	0/0:27,0:24:0:0,0,0	./.	1/1:15,0:15:2.98:21,3,0	./.	1/1:13,0:13:0.89:2,1,0	./.	./.	./.	0/1:14,0:13:3.77:42,0,4	0/0:17,0:17:5.91:0,6,37	1/1:24,0:23:2.04:6,2,0	1/1:15,4:18:2.33:44,2,0	1/1:15,0:13:2.22:7,2,0	./.	0/0:27,0:24:9.01:0,9,110	./.	1/1:9,0:9:2.94:18,3,0	0/1:22,0:21:2.12:49,0,2	0/1:17,0:17:5.99:6,0,61	./.	./.	1/1:11,0:10:0.67:43,1,0
chr10	87846633	.	CACACACACACACACACACACACACACAA	C	864.26	PASS	AB=0.863;AC=5;AF=0.089;AN=56;BaseQRankSum=-2.121;DP=505;FS=24.773;HRun=0;HaplotypeScore=285.7230;InbreedingCoeff=0.3202;MQ=48.86;MQ0=42;MQRankSum=1.623;QD=9.19;ReadPosRankSum=-2.833;VQSLOD=1.0863;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:34:52.50:52,0,834	0/0:13,0:12:4.12:0,4,824	0/0:6,0:2:5.96:0,6,47	0/0:18,0:8:16.49:0,16,244	0/0:18,0:16:39.11:0,39,2143	0/0:20,0:20:45.19:0,45,2540	0/0:20,0:18:37.13:0,37,1372	0/0:11,0:6:17.98:0,18,467	0/0:16,0:14:24.01:0,24,1168	0/1:22,0:18:0.72:1,0,1395	0/0:10,0:9:15.05:0,15,580	0/0:7,0:6:15.52:0,16,1033	0/0:9,0:9:18.05:0,18,734	0/0:10,0:9:24.05:0,24,1473	0/0:16,0:15:36.58:0,37,2219	0/0:23,0:23:43.43:0,43,2136	0/0:26,0:25:37.99:0,38,2705	0/0:25,0:23:57.12:0,57,2383	0/0:7,0:6:11.25:0,11,521	0/0:13,0:12:30.09:0,30,1486	0/0:39,0:34:81.02:0,81,4342	0/0:17,0:14:31:0,31,1422	0/0:12,0:12:29.30:0,29,1445	0/0:36,0:33:78.08:0,78,4364	0/0:20,0:20:48.16:0,48,3298	1/1:23,0:20:45.94:491,46,0	0/0:18,0:16:41.08:0,41,1304	0/1:3,7:9:99:436,0,281
chr10	87846732	.	TTTTTTTTTTTTC	T	1467.84	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=6.684;DP=468;FS=26.933;HRun=0;HaplotypeScore=113.7276;InbreedingCoeff=0.5425;MQ=48.83;MQ0=51;MQRankSum=-5.106;QD=10.05;ReadPosRankSum=3.486;VQSLOD=0.4979;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:24:99:136,0,109	1/1:0,10:10:9.03:296,9,0	0/0:30,0:4:9.03:0,9,255	0/1:20,0:7:7.77:8,0,39	0/0:24,0:22:54.16:0,54,1911	0/0:28,0:26:54.12:0,54,1885	0/0:14,0:14:39.02:0,39,1233	0/0:22,0:17:49.06:0,49,1911	0/0:12,0:8:21.07:0,21,786	1/1:6,6:10:15.13:293,15,0	1/1:4,9:12:20.78:516,21,0	0/0:12,0:11:24.03:0,24,784	0/0:7,0:4:12.02:0,12,288	0/0:8,0:8:21.02:0,21,659	0/0:12,0:11:21.07:0,21,858	0/0:12,0:12:24.64:0,25,811	1/1:9,16:20:11.92:347,12,0	0/0:21,0:19:36.08:0,36,1231	0/0:11,0:10:30.07:0,30,666	0/0:9,0:9:15.05:0,15,416	0/0:17,0:13:36.36:0,36,1164	0/0:13,0:12:27.08:0,27,949	0/0:11,0:9:27.05:0,27,834	0/0:25,0:18:33.01:0,33,1080	0/0:13,0:12:22.32:0,22,684	0/1:26,0:23:23.63:24,0,643	0/0:21,0:20:45.92:0,46,1340	0/1:6,0:3:15.47:15,0,31
chr10	87846733	.	TTTTTTTTTTTC	T	1478.16	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=6.559;DP=456;FS=36.878;HRun=0;HaplotypeScore=105.3748;InbreedingCoeff=0.6211;MQ=47.62;MQ0=51;MQRankSum=-4.895;QD=10.19;ReadPosRankSum=2.432;VQSLOD=0.3744;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,2:20:12.01:262,12,0	1/1:10,0:10:9.03:239,9,0	0/0:30,0:4:9.01:0,9,219	0/1:19,0:6:5.04:5,0,20	0/0:24,0:22:53.75:0,54,1664	0/0:27,0:25:51.13:0,51,1638	0/0:14,0:14:36.02:0,36,1053	0/0:20,0:15:43.36:0,43,1672	0/0:12,0:8:21.07:0,21,699	1/1:9,1:8:15.45:294,15,0	1/1:11,1:11:20.94:433,21,0	0/0:13,0:12:27.01:0,27,716	0/0:6,0:3:9.02:0,9,232	0/0:8,0:8:21.02:0,21,573	0/0:12,0:11:21.07:0,21,757	0/0:11,0:11:21.87:0,22,694	1/1:21,2:19:11.94:329,12,0	0/0:21,0:19:36.05:0,36,1073	0/0:11,0:10:29.71:0,30,540	0/1:10,0:10:2.57:3,0,325	0/0:17,0:13:36.02:0,36,1012	0/0:13,0:12:27.08:0,27,835	0/0:11,0:9:26.65:0,27,729	0/0:25,0:18:33.01:0,33,959	0/0:13,0:12:21.95:0,22,600	0/1:26,0:23:71.60:72,0,425	0/0:23,0:22:46.21:0,46,1149	0/1:6,0:3:13.77:16,0,14
chr10	87846741	.	TTTC	T	1293.33	PASS	AB=0.788;AC=20;AF=0.357;AN=56;BaseQRankSum=6.905;DP=420;FS=24.028;HRun=0;HaplotypeScore=56.3963;InbreedingCoeff=0.7609;MQ=44.25;MQ0=49;MQRankSum=-3.952;QD=8.51;ReadPosRankSum=5.152;VQSLOD=0.9519;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:17:39.83:279,40,0	1/1:10,0:10:9.02:89,9,0	0/0:20,0:1:2.97:0,3,20	0/1:14,0:3:5.03:5,0,9	0/0:23,0:21:39.18:0,39,313	0/0:29,0:27:41.64:0,42,307	0/0:16,0:16:39.51:0,40,309	0/0:22,0:17:44.49:0,44,334	0/0:17,0:13:32.69:0,33,235	1/1:10,0:8:14.95:132,15,0	1/1:12,0:11:20.92:185,21,0	0/0:10,0:9:15.70:0,16,102	0/0:5,0:2:2.99:0,3,25	0/0:7,0:7:17.94:0,18,153	0/0:10,0:9:11.95:0,12,104	0/0:11,0:11:22.84:0,23,170	1/1:23,0:19:12.02:119,12,0	0/0:22,0:20:13.87:0,14,206	1/1:1,5:5:8.91:99,9,0	1/1:11,0:11:20.65:156,21,0	0/0:16,0:13:10.10:0,10,174	0/0:16,0:15:33.44:0,33,241	0/0:10,0:8:21.71:0,22,186	0/0:21,0:15:29.90:0,30,273	0/0:13,0:12:14.60:0,15,108	1/1:21,0:18:50.73:395,51,0	0/1:4,11:15:7.20:11,0,7	1/1:4,0:1:2.98:22,3,0
chr10	87847415	.	TGGTTTATGCAG	T	4250.08	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.481;DP=581;FS=7.062;HRun=0;HaplotypeScore=188.1540;InbreedingCoeff=0.9921;MQ=84.21;MQ0=0;MQRankSum=-10.686;QD=48.85;ReadPosRankSum=0.814;VQSLOD=3.9690;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,21:31:39.13:1288,39,0	1/1:1,7:8:15.05:525,15,0	0/0:20,0:21:59.01:0,59,2913	0/0:17,0:17:51.14:0,51,2479	0/0:17,0:17:51.14:0,51,2258	0/0:14,0:14:42.14:0,42,2217	0/0:32,0:32:84.29:0,84,4307	0/0:25,0:25:72.25:0,72,3683	0/0:17,0:17:51.15:0,51,2674	1/1:4,10:14:30.10:1003,30,0	1/1:5,6:11:15.05:494,15,0	0/0:24,0:24:69.24:0,69,3902	0/0:21,0:21:63.22:0,63,3254	0/0:31,0:31:87.28:0,87,4844	0/0:21,0:21:63.20:0,63,3327	0/0:22,0:22:66.23:0,66,3480	1/1:9,14:23:27.09:940,27,0	0/0:23,0:23:66.23:0,66,3624	0/0:26,0:26:78.22:0,78,3538	0/0:16,0:16:48.16:0,48,2158	0/0:40,0:40:99:0,114,6037	0/0:24,0:24:69.24:0,69,3400	0/0:15,0:15:45.15:0,45,2433	0/0:26,0:26:78.24:0,78,4111	0/0:18,0:18:54.19:0,54,2852	0/0:17,0:17:51.16:0,51,2534	0/0:17,0:17:45.15:0,45,2115	0/0:10,0:10:30.10:0,30,1577
chr10	87848408	.	AGT	A	1127.07	PASS	AB=0.851;AC=19;AF=0.380;AN=50;BaseQRankSum=3.931;DP=618;FS=0.657;HRun=0;HaplotypeScore=83.2933;InbreedingCoeff=0.3344;MQ=62.99;MQ0=15;MQRankSum=1.611;QD=4.37;ReadPosRankSum=3.185;VQSLOD=2.3534;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:34:4.24:0,4,28	0/0:10,0:10:11.97:0,12,110	./.	./.	0/1:12,0:14:13.72:48,0,14	1/1:9,6:15:15.04:161,15,0	1/1:13,3:17:8.85:78,9,0	0/0:23,0:21:2.97:0,3,20	0/0:18,0:18:9.03:0,9,132	0/0:26,0:27:27.01:0,27,217	0/0:8,0:7:1.55:0,2,4	1/1:12,6:18:25.71:245,26,0	1/1:11,5:16:11.77:128,12,0	1/1:16,2:17:3.01:32,3,0	0/0:30,0:30:27.07:0,27,372	0/1:28,6:34:77.45:77,0,460	0/0:42,0:44:1.73:0,2,184	0/0:18,0:17:18.06:0,18,264	0/0:20,0:19:3.01:0,3,44	0/0:12,0:12:6.02:0,6,88	0/1:38,1:38:20.67:21,0,94	1/1:16,0:14:6.01:62,6,0	1/1:13,1:15:8.74:62,9,0	0/1:24,13:39:43.65:321,0,44	0/0:18,0:18:6.01:0,6,68	0/0:16,0:21:18.01:0,18,165	0/1:12,2:15:57.37:57,0,156	./.
chr10	87848603	.	TC	T	4631.58	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.831;DP=634;FS=2.748;HRun=1;HaplotypeScore=66.2021;InbreedingCoeff=0.9531;MQ=75.37;MQ0=2;MQRankSum=-2.724;QD=39.59;ReadPosRankSum=2.934;VQSLOD=5.6602;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:42:99:1636,117,0	1/1:1,13:14:36.07:500,36,0	0/0:14,0:13:1.95:0,2,204	0/0:16,0:12:26.59:0,27,372	0/0:14,0:14:39.13:0,39,619	0/0:20,0:20:59.57:0,60,916	0/0:31,0:31:93.29:0,93,1434	0/0:41,0:41:99:0,111,1754	0/0:22,0:22:66.21:0,66,1031	1/1:0,19:18:54.18:756,54,0	1/1:0,13:13:39.09:523,39,0	0/0:16,0:16:45.15:0,45,720	0/0:17,0:17:51.17:0,51,812	0/0:24,0:24:66.20:0,66,1047	0/0:34,0:34:99:0,102,1605	0/0:37,0:37:99:0,108,1724	1/1:0,29:29:87.29:1217,87,0	0/0:24,0:24:69.24:0,69,1103	0/0:25,0:25:75.26:0,75,1186	0/0:13,0:13:39.13:0,39,623	0/0:33,0:33:99:0,99,1556	0/0:19,0:19:48.16:0,48,762	0/0:18,0:18:51.17:0,51,815	0/0:35,0:35:99:0,102,1627	0/0:17,0:17:48.16:0,48,765	0/0:24,1:25:33.28:0,33,1108	0/0:14,0:14:42.13:0,42,642	0/0:8,0:8:24.08:0,24,383
chr10	87849100	.	CTT	C	5695.11	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.571;DP=679;FS=2.132;HRun=2;HaplotypeScore=87.0077;InbreedingCoeff=0.9988;MQ=86.05;MQ0=2;MQRankSum=-1.795;QD=41.88;ReadPosRankSum=2.551;VQSLOD=5.0468;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,45:45:99:1857,114,0	1/1:0,8:8:21.07:342,21,0	0/0:23,0:23:69.17:0,69,1257	0/0:21,0:21:53.81:0,54,875	0/0:19,0:19:54.17:0,54,1059	0/0:30,0:30:90.31:0,90,1809	0/0:33,0:33:99:0,99,1959	0/0:31,0:31:90.31:0,90,1828	0/0:15,0:15:45.15:0,45,902	1/1:0,23:23:63.19:970,63,0	1/1:0,17:17:42.14:677,42,0	0/0:16,0:16:48.15:0,48,940	0/0:14,0:14:42.14:0,42,808	0/0:12,0:12:36.11:0,36,694	0/0:34,0:34:99:0,102,2036	0/0:22,0:22:66.22:0,66,1295	1/1:0,41:41:99:1851,114,0	0/0:42,0:42:99:0,123,2404	0/0:22,0:22:63.18:0,63,1205	0/0:15,0:15:45.14:0,45,873	0/0:47,0:47:99:0,138,2802	0/0:24,0:24:72.25:0,72,1453	0/0:15,0:15:45.15:0,45,903	0/0:22,0:22:66.20:0,66,1302	0/0:21,0:21:63.20:0,63,1187	0/0:30,0:30:90.31:0,90,1827	0/0:26,0:26:78.27:0,78,1570	0/0:9,0:9:27.09:0,27,548
chr10	87849633	.	T	TTGTG	4503.17	PASS	AB=0.790;AC=36;AF=0.667;AN=54;BaseQRankSum=0.929;DP=668;FS=6.657;HRun=0;HaplotypeScore=157.3040;InbreedingCoeff=0.4642;MQ=69.53;MQ0=15;MQRankSum=-2.937;QD=10.26;ReadPosRankSum=1.367;VQSLOD=4.0572;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:35:4.88:191,5,0	1/1:2,0:3:2.89:51,3,0	0/0:35,0:18:2.99:0,3,24	./.	0/0:14,0:14:9.03:0,9,141	1/1:10,2:14:3.01:70,3,0	1/1:27,9:36:22.85:501,23,0	0/1:28,0:28:27.12:27,0,197	0/0:25,0:28:42.07:0,42,597	1/1:19,0:19:19.88:288,20,0	1/1:4,0:5:6.01:77,6,0	1/1:15,8:29:20.81:438,21,0	0/1:11,5:19:31.99:268,0,32	0/1:15,4:22:28.89:268,0,29	0/0:27,0:27:33.10:0,33,496	0/0:21,0:21:17.59:0,18,387	1/1:21,0:31:13.81:155,14,0	1/1:14,7:27:18.48:354,18,0	1/1:27,0:27:18.53:258,19,0	1/1:10,0:11:3.01:68,3,0	0/0:58,0:58:23.15:0,23,432	1/1:10,6:21:6.02:141,6,0	1/1:7,4:12:2.29:70,2,0	0/1:26,15:44:17.15:607,0,17	0/0:11,0:11:15.04:0,15,213	1/1:15,0:16:15.05:260,15,0	1/1:16,0:16:12.04:196,12,0	1/1:9,0:12:15.50:216,16,0
chr10	87850010	.	TTC	T	1065.39	PASS	AB=1.000;AC=30;AF=0.556;AN=54;BaseQRankSum=7.736;DP=447;FS=50.177;HRun=0;HaplotypeScore=65.0230;InbreedingCoeff=-0.1713;MQ=33.33;MQ0=107;MQRankSum=0.594;QD=2.86;ReadPosRankSum=2.143;VQSLOD=-0.6774;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,4:21:47.08:339,47,0	1/1:4,0:2:5.90:36,6,0	1/1:5,0:2:2.53:17,3,0	./.	0/1:23,0:17:30.29:30,0,258	0/1:20,0:16:6.88:89,0,7	1/1:22,0:16:22.07:125,22,0	0/1:32,0:31:6.49:6,0,873	0/1:16,0:13:9.89:10,0,291	0/1:13,0:10:25.16:116,0,25	1/1:3,0:2:2.97:20,3,0	0/1:18,0:13:11.88:62,0,12	0/1:14,0:12:1.80:51,0,2	0/1:13,0:9:3.48:64,0,3	1/1:14,0:11:7.27:35,7,0	0/0:20,0:19:42.14:0,42,667	0/1:15,0:7:1.21:56,0,1	0/1:23,0:15:37.58:38,0,68	0/0:16,0:15:2.79:0,3,202	0/1:13,0:6:0.26:0,0,57	0/0:13,0:9:1.50:0,2,212	0/1:15,0:13:48.69:49,0,61	0/1:8,0:5:8.06:24,0,8	1/1:13,0:5:3.92:12,4,0	0/1:17,0:14:17.40:17,0,324	0/0:14,0:11:21.16:0,21,400	0/1:20,0:16:10.15:10,0,161	0/1:22,0:13:10.37:10,0,281
chr10	87850012	.	CTT	C	1688.88	PASS	AB=0.957;AC=23;AF=0.426;AN=54;BaseQRankSum=2.502;DP=447;FS=32.440;HRun=8;HaplotypeScore=64.0864;InbreedingCoeff=0.3133;MQ=33.88;MQ0=105;MQRankSum=-2.304;QD=7.31;ReadPosRankSum=5.677;VQSLOD=-0.6919;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,16:21:42.59:503,43,0	1/1:1,3:2:6.02:73,6,0	0/1:4,0:2:0.01:0,0,0	./.	0/0:23,0:17:20.93:0,21,270	1/1:22,0:18:16.37:245,16,0	0/1:22,0:16:31.93:94,0,32	0/0:32,0:32:70.42:0,70,962	0/0:18,0:15:24.93:0,25,372	0/1:5,9:11:23.65:265,0,24	1/1:1,2:2:3.01:37,3,0	0/1:16,0:11:2.54:88,0,3	1/1:14,0:12:8.20:77,8,0	0/1:13,0:9:12.57:34,0,13	0/1:13,0:10:19.89:66,0,20	0/0:20,0:19:42.14:0,42,674	1/1:9,7:7:12.04:143,12,0	0/1:23,0:15:27.51:28,0,31	0/0:16,0:15:24.55:0,25,161	0/0:12,0:6:8.84:0,9,55	0/0:13,0:10:22.94:0,23,236	0/1:14,0:12:29.84:139,0,30	1/1:9,0:6:4.21:57,4,0	0/1:14,0:6:13.90:20,0,14	0/0:17,0:14:30.05:0,30,355	0/0:15,0:12:27.51:0,28,403	0/0:20,0:16:33.37:0,33,199	0/0:21,0:13:27.04:0,27,396
chr10	87850019	.	TTC	T	2056.90	PASS	AB=0.846;AC=31;AF=0.596;AN=52;BaseQRankSum=7.031;DP=390;FS=20.382;HRun=0;HaplotypeScore=53.9584;InbreedingCoeff=0.4304;MQ=33.48;MQ0=93;MQRankSum=-1.893;QD=8.36;ReadPosRankSum=4.425;VQSLOD=1.2374;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:23:14.89:201,0,15	1/1:4,0:2:5.81:31,6,0	./.	./.	0/0:20,0:14:18.40:0,18,268	1/1:5,14:16:33.09:468,33,0	1/1:10,6:11:17.31:232,17,0	0/0:31,0:30:78.23:0,78,1090	0/0:16,0:13:24.55:0,25,418	0/1:13,0:11:72.22:107,0,72	1/1:2,0:2:2.94:18,3,0	1/1:8,7:10:11.05:177,11,0	1/1:3,10:11:8.99:134,9,0	0/1:5,5:6:28.32:73,0,28	1/1:5,8:10:14.85:174,15,0	0/0:21,0:20:45.14:0,45,808	0/1:16,0:9:42.82:43,0,54	1/1:10,6:8:4.88:87,5,0	1/1:13,0:12:8.59:50,9,0	1/1:13,0:8:2.65:6,3,0	0/0:10,0:7:14.41:0,14,218	0/1:3,10:11:33.52:262,0,34	1/1:2,5:5:9.03:121,9,0	1/1:10,7:9:2.47:43,2,0	0/0:14,0:11:23.94:0,24,350	0/0:14,0:11:30.08:0,30,496	1/1:14,0:10:1.60:11,2,0	0/0:16,0:10:24:0,24,359
chr10	87850020	.	TC	T	1096.31	PASS	AB=1.000;AC=24;AF=0.462;AN=52;BaseQRankSum=3.149;DP=357;FS=8.136;HRun=2;HaplotypeScore=46.0237;InbreedingCoeff=0.7165;MQ=33.20;MQ0=93;MQRankSum=-1.580;QD=6.90;ReadPosRankSum=1.094;VQSLOD=0.3957;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:23:43.18:0,43,204	0/0:6,0:4:5.60:0,6,27	./.	./.	0/0:17,0:11:14.96:0,15,186	1/1:19,0:16:31:160,31,0	1/1:12,0:7:16.94:89,17,0	0/0:26,0:25:65.89:0,66,747	0/0:13,0:10:21:0,21,271	0/0:13,0:11:30.07:0,30,181	0/0:2,0:2:2.68:0,3,11	1/1:12,0:7:11.61:62,12,0	1/1:12,0:10:8.71:47,9,0	0/1:10,0:6:10.61:17,0,11	1/1:11,0:8:12.99:60,13,0	0/0:19,0:18:45.14:0,45,608	0/0:17,0:10:23.04:0,23,151	1/1:14,0:6:5.81:32,6,0	1/1:1,9:9:24.02:268,24,0	1/1:6,7:8:9.03:115,9,0	0/0:9,0:6:11.97:0,12,144	0/1:13,0:11:18.73:89,0,19	1/1:7,0:5:7.81:36,8,0	1/1:15,0:7:2.19:14,2,0	0/0:12,0:9:20.97:0,21,253	0/0:14,0:10:30.04:0,30,368	1/1:3,8:8:24.08:303,24,0	0/0:16,0:10:17.96:0,18,185
chr10	87851302	.	CTTAG	C	6209.59	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.470;DP=756;FS=1.673;HRun=0;HaplotypeScore=125.7371;InbreedingCoeff=0.9999;MQ=80.31;MQ0=0;MQRankSum=-3.748;QD=44.67;ReadPosRankSum=3.320;VQSLOD=5.6591;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,168,4287	0/0:13,0:13:39.13:0,39,1040	0/0:14,0:15:38.60:0,39,883	0/0:24,0:24:58.76:0,59,1429	0/0:22,0:22:60.21:0,60,1591	1/1:0,18:18:45.15:840,45,0	1/1:3,23:26:60.21:1119,60,0	0/0:36,0:36:99:0,102,2637	0/0:28,0:28:75.24:0,75,1936	0/0:29,0:29:78.26:0,78,2001	0/0:11,0:11:33.11:0,33,834	1/1:2,33:35:84.29:1567,84,0	0/0:26,0:26:78.27:0,78,2079	1/1:1,24:25:63.22:1173,63,0	0/0:43,0:43:99:0,123,3182	0/0:24,0:24:69.24:0,69,1837	0/0:47,0:47:99:0,138,3591	1/1:0,14:14:39.13:728,39,0	0/0:30,0:30:75.23:0,75,1888	0/0:18,0:18:48.16:0,48,1279	0/0:53,0:53:99:0,151,3966	1/1:4,17:21:42.14:782,42,0	0/0:22,0:22:60.16:0,60,1511	0/0:27,0:27:78.27:0,78,2078	0/0:22,0:22:66.23:0,66,1761	0/0:23,0:23:66.23:0,66,1759	0/0:25,0:25:75.26:0,75,1992	0/0:21,0:21:63.22:0,63,1680
chr10	87851619	.	CAA	C	1201.79	PASS	AB=0.733;AC=17;AF=0.304;AN=56;BaseQRankSum=2.749;DP=594;FS=1.611;HRun=16;HaplotypeScore=80.9429;InbreedingCoeff=0.5241;MQ=53.10;MQ0=26;MQRankSum=2.318;QD=4.50;ReadPosRankSum=1.585;VQSLOD=-0.4999;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,4:46:7.65:8,0,290	0/0:5,0:11:20.84:0,21,140	0/0:13,0:6:3.36:0,3,96	0/0:13,0:9:8.86:0,9,112	0/0:20,0:22:52.65:0,53,521	1/1:6,14:19:32.78:276,33,0	1/1:11,10:21:15.91:217,16,0	0/0:23,0:26:57.92:0,58,518	0/0:17,0:17:34.73:0,35,271	0/1:13,2:26:10.87:11,0,147	0/1:13,2:21:23.40:23,0,77	1/1:4,12:16:20.51:174,21,0	0/0:16,0:16:34.19:0,34,259	1/1:6,6:12:20.79:175,21,0	0/0:22,0:23:49.01:0,49,459	0/0:24,0:25:50.86:0,51,520	0/1:17,2:27:25.23:25,0,131	1/1:14,8:19:23.23:211,23,0	0/1:24,2:22:8.16:8,0,317	0/0:20,0:20:29.30:0,29,290	0/0:14,1:15:3.68:0,4,244	1/1:5,16:20:29.38:263,29,0	0/0:13,1:17:22.80:0,23,189	0/0:16,0:16:32.06:0,32,309	0/0:22,0:21:38.27:0,38,443	0/0:25,1:28:29.78:0,30,439	0/0:17,0:16:3.28:0,3,159	0/0:17,0:15:34.89:0,35,372
chr10	87851979	.	CA	C	4907.98	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.136;DP=599;FS=1.640;HRun=2;HaplotypeScore=61.2894;InbreedingCoeff=0.9989;MQ=89.23;MQ0=0;MQRankSum=-2.212;QD=35.57;ReadPosRankSum=3.322;VQSLOD=5.4349;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1617	0/0:8,0:8:21.07:0,21,314	0/0:32,0:32:90.26:0,90,1324	0/0:20,0:20:51.16:0,51,733	0/0:23,0:23:63.21:0,63,944	1/1:2,25:27:75.24:974,75,0	1/1:0,26:26:72.23:935,72,0	0/0:39,0:39:99:0,117,1736	0/0:21,0:21:63.21:0,63,944	0/0:23,0:23:66.22:0,66,971	0/0:14,0:14:42.14:0,42,629	1/1:1,23:24:69.22:896,69,0	0/0:23,0:23:69.23:0,69,1030	1/1:0,16:16:45.15:584,45,0	0/0:22,0:22:66.22:0,66,989	0/0:18,0:18:54.15:0,54,756	0/0:29,0:29:87.29:0,87,1300	1/1:1,23:24:63.20:818,63,0	0/0:14,0:14:39.13:0,39,583	0/0:15,0:15:45.15:0,45,668	0/0:18,0:18:54.17:0,54,789	1/1:0,21:21:54.18:701,54,0	0/0:18,0:18:48.16:0,48,708	0/0:22,0:21:66.22:0,66,989	0/0:17,0:17:48.15:0,48,700	0/0:27,0:27:81.25:0,81,1175	0/0:9,0:9:27.09:0,27,405	0/0:13,0:13:35.38:0,35,538
chr10	87852108	.	CA	C	817.66	PASS	AB=0.942;AC=15;AF=0.268;AN=56;BaseQRankSum=13.235;DP=515;FS=3.312;HRun=1;HaplotypeScore=80.2636;InbreedingCoeff=0.7329;MQ=86.59;MQ0=0;MQRankSum=-0.390;QD=5.56;ReadPosRankSum=5.294;VQSLOD=0.8705;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:50.02:0,50,336	0/0:8,0:8:23.70:0,24,157	0/0:18,0:18:21.72:0,22,615	0/0:21,0:20:50.48:0,50,530	0/0:18,0:18:54.09:0,54,688	1/1:16,0:16:34.39:118,34,0	1/1:17,0:17:15.98:115,16,0	0/0:24,0:24:72.19:0,72,917	0/0:13,0:13:30.08:0,30,404	0/0:15,0:15:39.75:0,40,265	0/0:10,0:10:26.73:0,27,202	0/1:16,1:17:3.18:118,0,3	0/0:24,0:24:72.19:0,72,973	1/1:12,1:13:29.65:109,30,0	0/0:16,0:16:43.95:0,44,598	0/0:14,0:14:42.11:0,42,575	0/0:34,0:34:94.65:0,95,631	1/1:29,1:30:17.26:181,17,0	1/1:7,0:7:10.85:32,11,0	0/1:15,1:16:29.30:83,0,29	0/0:35,0:35:99:0,105,1412	1/1:14,1:15:7.92:134,8,0	0/0:9,0:9:27.09:0,27,391	0/0:37,0:37:99:0,111,1448	0/0:22,0:22:63.19:0,63,886	0/0:21,0:21:63.19:0,63,863	0/1:15,1:15:15.19:116,0,15	0/0:5,0:5:15.05:0,15,219
chr10	87852109	.	AC	A	3833.09	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=7.225;DP=513;FS=5.400;HRun=7;HaplotypeScore=71.7368;InbreedingCoeff=0.9927;MQ=87.36;MQ0=0;MQRankSum=-3.543;QD=25.73;ReadPosRankSum=2.558;VQSLOD=4.4649;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:24:37.03:0,37,190	0/0:3,0:8:17.17:0,17,92	0/0:18,0:18:20.81:0,21,456	0/0:21,0:21:21.08:0,21,314	0/0:18,0:18:48.15:0,48,600	1/1:1,16:17:45.10:459,45,0	1/1:1,16:17:45.10:459,45,0	0/0:24,0:24:51.13:0,51,604	0/0:13,0:13:27.07:0,27,327	0/0:6,0:15:32.63:0,33,159	0/0:1,0:9:20.01:0,20,107	1/1:3,14:17:45.08:451,45,0	0/0:24,0:24:63.17:0,63,757	1/1:1,12:13:39.09:398,39,0	0/0:15,0:15:42.13:0,42,521	0/0:14,0:14:36.11:0,36,450	0/0:5,0:33:76.08:0,76,384	1/1:5,25:30:79.42:796,79,0	1/1:0,7:7:21.04:210,21,0	1/1:3,13:16:36.07:364,36,0	0/0:36,0:36:93.22:0,93,1123	1/1:3,13:16:42:407,42,0	0/0:9,0:9:27.08:0,27,326	0/0:34,0:34:87.26:0,87,1080	0/0:22,0:22:63.19:0,63,778	0/0:21,0:21:57.17:0,57,706	1/1:3,13:15:30.02:290,30,0	0/0:5,0:5:15.05:0,15,189
chr10	87852185	.	AG	A	2278.09	PASS	AB=0.933;AC=15;AF=0.278;AN=54;BaseQRankSum=1.060;DP=451;FS=5.519;HRun=10;HaplotypeScore=67.7847;InbreedingCoeff=0.6320;MQ=75.51;MQ0=0;MQRankSum=-1.757;QD=14.89;ReadPosRankSum=3.491;VQSLOD=4.0554;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:14:15.58:0,16,122	0/0:2,0:3:5.85:0,6,47	0/1:13,0:13:30.08:30,0,108	0/1:8,0:9:28.65:29,0,42	0/0:21,0:21:45.11:0,45,490	1/1:4,16:20:50.98:442,51,0	1/1:4,17:21:50.99:443,51,0	0/0:12,0:12:24.48:0,24,237	0/0:13,1:14:10.03:0,10,314	0/0:10,0:19:19.77:0,20,118	0/0:6,0:10:11.53:0,12,57	1/1:5,8:13:23.91:201,24,0	0/0:17,0:17:35.10:0,35,353	1/1:4,12:16:32.96:282,33,0	0/0:14,0:14:30.08:0,30,332	0/0:13,0:13:30.06:0,30,310	0/0:18,0:40:90.46:0,90,558	1/1:6,30:36:23.63:663,24,0	0/0:7,0:13:14.29:0,14,84	0/0:3,0:3:0.67:0,1,21	0/0:30,0:30:72.18:0,72,788	1/1:4,12:16:41.99:364,42,0	0/1:8,1:9:11.01:11,0,118	0/0:33,0:33:93.07:0,93,1001	0/0:16,1:17:10.04:0,10,338	0/0:10,0:14:14.34:0,14,108	0/0:9,0:9:5.82:0,6,37	./.
chr10	87852253	.	CGTGTGTGT	C	1567.89	PASS	AB=0.960;AC=9;AF=0.161;AN=56;BaseQRankSum=2.388;DP=597;FS=1.469;HRun=0;HaplotypeScore=178.0290;InbreedingCoeff=0.6778;MQ=60.92;MQ0=8;MQRankSum=-3.595;QD=15.22;ReadPosRankSum=2.174;VQSLOD=2.7959;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,2:17:12.91:259,13,0	0/0:3,0:3:2.19:0,2,11	0/0:18,0:10:5.98:0,6,60	0/0:22,0:17:3.01:0,3,58	0/0:19,0:20:29.45:0,29,662	0/0:16,0:17:26.89:0,27,480	0/0:27,0:29:20.82:0,21,297	0/0:16,0:16:14.99:0,15,168	0/1:22,0:24:17.88:18,0,639	1/1:25,7:31:40.89:771,41,0	1/1:1,3:4:2.73:14,3,0	0/0:28,0:26:35.95:0,36,671	0/0:15,0:15:15.02:0,15,356	0/0:21,0:23:38.30:0,38,766	0/0:19,0:19:23.89:0,24,569	0/0:13,0:13:21.05:0,21,575	1/1:20,5:25:35.95:657,36,0	0/0:23,0:27:41.41:0,41,875	0/0:16,0:16:4.70:0,5,320	0/0:13,0:14:27.02:0,27,719	0/0:62,0:63:96.10:0,96,2945	0/0:21,0:23:22.16:0,22,340	0/0:11,0:12:24.06:0,24,669	0/0:34,0:37:66.20:0,66,1847	0/0:15,0:15:24.08:0,24,740	0/0:36,0:35:60.17:0,60,1329	0/0:13,0:13:27.06:0,27,700	0/0:10,0:8:24.08:0,24,814
chr10	87852350	.	CTG	C	4440.87	PASS	AB=0.919;AC=30;AF=0.536;AN=56;BaseQRankSum=4.931;DP=714;FS=5.393;HRun=0;HaplotypeScore=138.6598;InbreedingCoeff=0.3393;MQ=57.60;MQ0=11;MQRankSum=0.405;QD=10.97;ReadPosRankSum=-0.128;VQSLOD=4.3022;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,2:41:42.09:0,42,1097	0/1:5,1:6:20.70:21,0,133	0/0:50,0:15:2.10:0,2,23	0/1:67,0:23:13.89:14,0,139	0/1:6,0:6:20.67:21,0,167	1/1:9,9:18:25.82:290,26,0	1/1:15,15:31:47.95:694,48,0	0/1:27,4:31:88.85:89,0,565	0/0:18,0:17:39.06:0,39,539	0/1:25,2:27:45.56:46,0,593	0/0:10,2:12:21.07:0,21,334	1/1:7,14:21:20.37:458,20,0	0/1:12,2:14:36.31:36,0,346	1/1:15,13:29:60:660,60,0	0/0:16,1:17:39.09:0,39,536	0/0:18,2:20:8.75:0,9,544	0/1:28,2:32:37.72:38,0,645	1/1:12,11:23:44.59:513,45,0	1/1:13,10:23:27.08:322,27,0	1/1:3,5:8:15.04:179,15,0	0/0:95,3:96:88.23:0,88,2648	1/1:11,3:16:18.05:214,18,0	0/1:10,1:11:10.43:10,0,287	0/0:34,1:35:42.41:0,42,1058	0/0:15,1:16:3.39:0,3,537	1/1:7,21:28:62.86:663,63,0	1/1:5,3:7:9.02:107,9,0	1/1:4,2:6:2.83:66,3,0
chr10	87853325	.	C	CCTT	3755.43	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.355;DP=621;FS=5.326;HRun=0;HaplotypeScore=86.7338;InbreedingCoeff=0.9928;MQ=70.14;MQ0=0;MQRankSum=-5.173;QD=50.07;ReadPosRankSum=-2.623;VQSLOD=5.1318;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,1809	0/0:7,0:7:21.07:0,21,337	0/0:19,0:19:44.08:0,44,547	0/0:23,0:19:45.02:0,45,663	0/0:21,0:21:51.17:0,51,817	0/0:26,0:26:72.25:0,72,1156	0/0:20,0:20:54.18:0,54,867	0/0:22,0:22:57.66:0,58,896	0/0:13,0:13:36.11:0,36,555	0/0:34,0:34:96.30:0,96,1491	0/0:11,0:11:33.10:0,33,505	0/0:23,0:23:66.22:0,66,1050	0/0:20,0:20:54.17:0,54,821	0/0:23,0:23:66.21:0,66,1024	0/0:19,0:19:57.19:0,57,884	0/0:21,0:21:60.20:0,60,933	0/0:35,0:35:93.25:0,93,1421	0/0:22,0:22:48.15:0,48,746	1/1:8,17:27:66.17:1216,66,0	1/1:4,17:22:59.86:1165,60,0	0/0:39,0:39:92.88:0,93,1481	0/0:21,0:21:60.19:0,60,906	0/0:15,0:15:39.13:0,39,596	0/0:25,0:25:75.24:0,75,1170	0/0:17,0:17:48.16:0,48,750	0/0:24,0:24:69.23:0,69,1088	1/1:3,22:25:63.22:1375,63,0	0/0:5,0:5:15.05:0,15,241
chr10	87854083	.	T	TTG	5450.52	PASS	AB=0.753;AC=29;AF=0.518;AN=56;BaseQRankSum=-2.158;DP=515;FS=1.549;HRun=0;HaplotypeScore=81.3151;InbreedingCoeff=0.5750;MQ=74.01;MQ0=4;MQRankSum=-2.430;QD=18.79;ReadPosRankSum=1.434;VQSLOD=4.8229;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,19:34:0.60:486,1,0	0/1:2,2:4:26.52:85,0,27	0/0:49,0:33:38.64:0,39,398	0/0:34,0:27:25.12:0,25,496	0/0:10,0:9:18.06:0,18,213	1/1:6,9:15:19.88:291,20,0	1/1:9,23:32:9.61:630,10,0	0/0:21,0:23:29.52:0,30,305	0/0:9,0:10:20.89:0,21,227	1/1:15,7:22:33.08:491,33,0	1/1:3,2:6:14.97:206,15,0	0/1:3,8:11:41:350,0,41	0/0:13,0:14:26.91:0,27,298	1/1:5,13:18:27.09:416,27,0	0/0:7,0:7:15.04:0,15,177	0/0:8,0:8:15.05:0,15,178	1/1:9,22:31:13.09:677,13,0	1/1:10,24:35:54.18:856,54,0	1/1:14,0:17:23.94:199,24,0	0/1:7,0:8:2.25:15,0,2	0/0:35,0:38:68.79:0,69,710	0/1:5,6:12:47.02:261,0,47	0/0:5,0:6:3.01:0,3,36	0/0:25,0:25:66.15:0,66,755	0/1:7,0:7:28.91:29,0,160	1/1:15,1:20:35.87:323,36,0	1/1:14,0:13:12.77:84,13,0	1/1:0,0:2:6:53,6,0
chr10	87854109	.	GGGTGGC	G	1911.35	PASS	AB=1.000;AC=13;AF=0.260;AN=50;BaseQRankSum=4.570;DP=406;FS=19.511;HRun=0;HaplotypeScore=108.4388;InbreedingCoeff=0.6809;MQ=63.63;MQ0=3;MQRankSum=-5.697;QD=15.54;ReadPosRankSum=-0.983;VQSLOD=1.5997;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,5:18:24.08:426,24,0	1/1:1,2:3:6.02:123,6,0	0/0:28,0:15:0.47:0,0,1	0/1:34,0:28:5.38:5,0,39	0/0:6,0:5:6.02:0,6,141	0/0:14,0:14:12.04:0,12,391	0/0:27,0:27:48.15:0,48,1375	./.	0/0:9,0:9:12.04:0,12,382	1/1:9,9:18:24.01:451,24,0	1/1:6,3:9:3.01:61,3,0	0/0:15,0:15:21.07:0,21,607	0/0:10,0:10:15.05:0,15,488	0/0:11,0:11:9.03:0,9,292	0/0:5,0:5:6.02:0,6,118	0/0:7,0:7:12.04:0,12,391	1/1:20,5:25:23.99:392,24,0	0/0:26,0:26:48.16:0,48,1517	0/0:11,0:11:4.26:0,4,48	0/0:6,0:6:3.01:0,3,36	0/0:37,0:35:42.13:0,42,1198	0/0:13,0:13:9.03:0,9,270	./.	0/0:29,0:29:75.26:0,75,2334	0/0:7,0:7:6:0,6,121	1/1:7,9:16:30.10:616,30,0	0/0:5,0:9:15.05:0,15,282	./.
chr10	87854483	.	G	GGCTGGGGAG	1671.50	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=4.190;DP=432;FS=2.028;HRun=0;HaplotypeScore=115.6240;InbreedingCoeff=0.7652;MQ=69.64;MQ0=5;MQRankSum=-6.039;QD=19.66;ReadPosRankSum=-0.006;VQSLOD=2.5570;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,12:24:3.01:87,3,0	1/1:5,0:5:3.01:115,3,0	0/0:24,0:17:21.07:0,21,481	0/0:16,0:13:15.05:0,15,397	0/1:3,0:2:0:0,0,0	0/0:13,0:12:15.03:0,15,322	0/0:24,0:23:45.08:0,45,1081	0/0:13,0:12:9.03:0,9,237	0/0:23,0:22:39.12:0,39,944	1/1:12,0:12:8.51:240,9,0	1/1:2,0:2:3.01:51,3,0	0/0:23,0:23:30.10:0,30,792	0/0:9,0:9:21.07:0,21,549	0/0:15,0:15:36.11:0,36,907	0/0:13,0:13:21.06:0,21,526	0/0:12,0:12:21.07:0,21,577	1/1:27,0:26:18.05:634,18,0	0/0:32,0:32:66.17:0,66,1711	0/0:23,0:23:18.06:0,18,479	./.	0/0:43,0:42:66.23:0,66,1768	0/0:9,0:9:18.05:0,18,428	0/0:6,0:6:6.02:0,6,167	0/0:23,0:23:39.08:0,39,963	0/0:11,0:10:7.27:0,7,239	1/1:8,0:8:15.05:592,15,0	0/0:12,0:12:21.07:0,21,585	1/1:4,0:4:3.01:115,3,0
chr10	87854489	.	GGAGGCTGCTA	G	1223.35	PASS	AB=0.919;AC=12;AF=0.222;AN=54;BaseQRankSum=3.387;DP=415;FS=0.883;HRun=0;HaplotypeScore=108.2577;InbreedingCoeff=0.5115;MQ=63.79;MQ0=7;MQRankSum=-6.061;QD=15.68;ReadPosRankSum=1.083;VQSLOD=2.2591;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,1:20:20.48:20,0,64	0/1:4,0:4:17.98:90,0,18	0/0:22,0:15:30.08:0,30,700	0/0:16,0:10:23.91:0,24,616	0/1:3,0:2:0:0,0,0	0/0:17,0:15:22.66:0,23,727	0/0:23,0:22:60.19:0,60,1869	0/0:15,0:12:24.05:0,24,519	0/0:22,0:21:47.94:0,48,1541	1/1:9,3:12:8.51:198,9,0	1/1:2,0:2:3.01:51,3,0	0/0:21,0:21:43.03:0,43,1374	0/0:10,0:9:27.08:0,27,1065	0/0:16,0:15:39.10:0,39,1186	0/0:11,0:11:27.08:0,27,787	0/0:11,0:11:27.09:0,27,1037	0/1:16,10:25:99:446,0,322	0/0:30,0:30:75.26:0,75,2846	0/0:15,0:15:21.03:0,21,682	./.	0/0:42,0:41:81.25:0,81,2684	0/0:10,0:10:20.79:0,21,612	0/0:6,0:6:8.57:0,9,292	0/0:22,0:22:57.13:0,57,2078	0/0:11,0:10:8.51:0,9,340	1/1:2,5:7:15.05:471,15,0	0/0:14,0:14:32.95:0,33,1208	1/1:0,4:4:3.01:96,3,0
chr10	87855635	.	TTCCTCC	T	3786.67	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.616;DP=584;FS=0.506;HRun=0;HaplotypeScore=129.1899;InbreedingCoeff=0.9923;MQ=86.72;MQ0=1;MQRankSum=-10.033;QD=43.03;ReadPosRankSum=0.457;VQSLOD=3.4944;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:32.97:593,33,0	0/0:8,0:8:24.08:0,24,821	0/0:32,0:30:60.19:0,60,1683	0/0:29,0:30:47.26:0,47,1103	0/0:14,0:14:42.14:0,42,1416	0/0:17,0:17:48.14:0,48,1565	0/0:23,0:23:63.20:0,63,1942	0/0:36,0:36:90.27:0,90,2736	0/0:20,0:20:57.20:0,57,1903	0/0:17,0:17:51.17:0,51,1600	0/0:20,0:20:54.19:0,54,1822	0/0:24,0:24:72.23:0,72,2277	0/0:25,0:25:69.19:0,69,2073	0/0:31,0:31:84.27:0,84,2659	0/0:28,0:28:72.25:0,72,2472	0/0:22,0:22:56.95:0,57,1709	0/0:29,0:29:75.22:0,75,2293	0/0:28,0:28:81.20:0,81,2411	1/1:2,8:10:21.05:397,21,0	1/1:3,10:13:32.99:594,33,0	0/0:27,0:27:81.22:0,81,2544	0/0:17,0:17:42.13:0,42,1344	0/0:15,0:15:39.13:0,39,1321	0/0:16,0:16:45.14:0,45,1391	0/0:17,0:17:45.13:0,45,1410	1/1:3,17:20:44.99:866,45,0	1/1:1,17:18:48.16:1068,48,0	1/1:2,4:6:12.04:268,12,0
chr10	87856848	.	G	GT	4513.85	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-1.446;DP=716;FS=10.964;HRun=9;HaplotypeScore=96.8193;InbreedingCoeff=0.9972;MQ=67.54;MQ0=5;MQRankSum=1.357;QD=17.84;ReadPosRankSum=-1.714;VQSLOD=3.5249;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,3:29:54:313,54,0	1/1:2,0:11:25.46:134,25,0	0/0:23,0:20:40.96:0,41,335	0/0:10,0:9:14.79:0,15,109	0/0:31,1:32:68.07:0,68,753	0/0:24,0:24:68.98:0,69,597	0/0:21,0:21:59.99:0,60,521	0/0:31,0:31:77.95:0,78,671	0/0:25,0:25:65.94:0,66,567	1/1:6,0:35:79.25:443,79,0	1/1:1,1:19:48.03:254,48,0	0/0:34,0:34:89.97:0,90,780	0/0:18,0:18:47.99:0,48,416	0/0:15,0:15:44.96:0,45,383	0/0:17,0:17:44.99:0,45,391	0/0:33,0:33:98.97:0,99,856	1/1:6,0:24:54.62:285,55,0	0/0:33,0:33:89.95:0,90,778	1/1:6,16:23:34.15:555,34,0	1/1:5,15:20:48.02:501,48,0	0/0:24,0:24:52.98:0,53,446	0/0:32,0:32:83.95:0,84,720	0/0:30,0:30:83.98:0,84,729	0/0:35,0:35:99:0,102,881	0/0:25,0:25:65.98:0,66,573	1/1:7,27:38:63.67:868,64,0	1/1:7,23:30:63.17:696,63,0	1/1:4,18:22:42.11:465,42,0
chr10	87857740	.	AGAGG	A	1291.02	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.558;DP=553;FS=1.457;HRun=0;HaplotypeScore=115.2938;InbreedingCoeff=0.9491;MQ=65.23;MQ0=4;MQRankSum=-2.879;QD=25.82;ReadPosRankSum=-1.017;VQSLOD=3.2816;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:74.75:0,75,1655	1/1:1,7:8:14.99:227,15,0	0/0:35,0:21:41.84:0,42,630	0/0:43,0:23:3.73:0,4,599	0/0:14,0:14:39.13:0,39,973	0/0:19,0:19:48.16:0,48,1211	0/0:18,0:18:54.10:0,54,1222	0/0:26,0:26:57.15:0,57,1220	0/0:20,0:20:48.15:0,48,1130	1/1:8,11:18:33.08:493,33,0	1/1:0,10:10:21.03:316,21,0	0/0:19,0:19:51.14:0,51,1137	0/0:22,0:22:51.18:0,51,1232	0/0:15,0:15:36.12:0,36,908	0/0:17,0:17:48.11:0,48,1082	0/0:16,0:16:36.11:0,36,857	1/1:3,10:13:24.08:413,24,0	0/0:14,0:14:39.13:0,39,968	0/0:18,0:18:33.11:0,33,784	0/0:13,0:13:33.07:0,33,753	0/0:21,0:21:48.16:0,48,1157	0/0:23,0:23:49.04:0,49,1122	0/0:12,0:12:30.10:0,30,712	0/0:27,0:27:56.41:0,56,1305	0/0:15,0:15:36.10:0,36,809	0/0:25,0:25:60.20:0,60,1397	0/0:28,0:28:69.23:0,69,1664	0/0:7,0:7:18.06:0,18,427
chr10	87857819	.	GAGAGAGAGAGAGAGAGAT	G	3880.79	PASS	AB=0.947;AC=24;AF=0.429;AN=56;BaseQRankSum=8.197;DP=452;FS=6.166;HRun=0;HaplotypeScore=203.1785;InbreedingCoeff=0.3508;MQ=51.15;MQ0=35;MQRankSum=-0.484;QD=15.71;ReadPosRankSum=0.609;VQSLOD=1.4904;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:22:16.35:100,0,16	0/1:10,0:10:72.77:73,0,207	0/0:21,0:12:22.14:0,22,231	0/0:23,0:7:2.94:0,3,51	0/0:15,0:15:30.03:0,30,667	1/1:16,0:16:23.76:324,24,0	0/1:14,0:12:5.70:208,0,6	0/0:28,0:27:76.64:0,77,885	0/0:12,0:10:17.26:0,17,436	0/1:18,0:17:95.91:96,0,760	0/1:15,0:14:58.81:59,0,129	0/1:10,0:9:4.13:126,0,4	0/0:8,0:8:21.02:0,21,527	1/1:4,0:4:8.33:55,8,0	0/0:15,0:12:27.03:0,27,569	0/0:15,0:15:36.10:0,36,1645	0/1:14,0:12:44.76:45,0,284	1/1:11,0:11:28.44:268,28,0	1/1:12,0:9:17.62:221,18,0	1/1:4,12:15:3.01:138,3,0	0/0:19,0:14:30.05:0,30,765	1/1:12,0:12:4.40:47,4,0	0/0:19,0:19:33.10:0,33,1050	0/0:22,0:21:37.35:0,37,1848	0/0:7,0:7:14.96:0,15,290	0/1:7,20:27:53.03:872,0,53	1/1:8,23:29:12.48:1043,12,0	1/1:7,7:11:6.02:207,6,0
chr10	87857821	.	GAGAGAGAGAGAGAGAT	G	4064.01	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=7.437;DP=441;FS=5.000;HRun=0;HaplotypeScore=185.2713;InbreedingCoeff=0.4570;MQ=56.01;MQ0=34;MQRankSum=-0.641;QD=17.67;ReadPosRankSum=0.922;VQSLOD=1.9650;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,13:19:3.01:142,3,0	0/1:10,0:10:89.75:90,0,153	0/0:21,0:12:21.60:0,22,223	0/0:26,0:10:7.38:0,7,75	0/0:15,0:15:30.03:0,30,635	1/1:16,0:16:46.60:564,47,0	1/1:14,0:12:21.08:253,21,0	0/0:28,0:27:80.98:0,81,812	0/0:11,0:9:14.29:0,14,380	0/1:16,0:15:99:100,0,632	0/1:16,0:15:81.33:81,0,95	1/1:10,0:9:1.77:184,2,0	0/0:8,0:8:24.01:0,24,478	1/1:4,0:4:12.03:175,12,0	0/0:16,0:13:30.02:0,30,496	0/0:16,0:16:39.09:0,39,1522	0/1:14,0:12:45.13:45,0,268	1/1:12,0:12:32.95:397,33,0	0/1:12,0:9:3.52:155,0,4	1/1:13,0:12:3.01:105,3,0	0/0:18,0:14:30.02:0,30,619	1/1:12,0:12:4.81:49,5,0	0/0:20,0:20:36.06:0,36,895	0/0:25,0:23:43.39:0,43,1743	0/0:7,0:7:14.96:0,15,264	0/1:22,0:22:30.41:626,0,30	1/1:28,0:26:24.06:891,24,0	1/1:11,0:8:6.02:206,6,0
chr10	87857835	.	GAT	G	2934.32	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=6.153;DP=451;FS=3.923;HRun=0;HaplotypeScore=112.1801;InbreedingCoeff=0.9057;MQ=60.23;MQ0=23;MQRankSum=-1.787;QD=12.03;ReadPosRankSum=1.294;VQSLOD=3.6116;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:3:25,3,0	1/1:9,1:10:16.23:162,16,0	0/0:28,0:19:36.95:0,37,349	0/0:28,0:12:13.77:0,14,103	0/0:17,0:17:38.85:0,39,305	1/1:17,3:20:59.70:468,60,0	1/1:15,0:15:38.87:313,39,0	0/0:31,0:30:77.88:0,78,668	0/0:10,0:10:16.71:0,17,190	1/1:17,0:17:22.50:280,22,0	1/1:20,0:19:29.72:241,30,0	1/1:10,1:10:22.33:177,22,0	0/0:8,0:8:22.78:0,23,176	1/1:10,0:10:29.74:219,30,0	0/0:15,0:13:29.98:0,30,278	0/0:15,0:15:33.03:0,33,429	1/1:13,0:11:13.94:115,14,0	1/1:11,2:13:35.83:287,36,0	1/1:16,0:13:12.08:190,12,0	1/1:13,0:12:2.22:7,2,0	0/0:15,0:13:32.89:0,33,259	1/1:0,13:13:5.93:53,6,0	0/0:13,0:13:32.63:0,33,287	0/0:18,0:17:38.55:0,39,449	0/0:8,0:8:23.94:0,24,209	1/1:22,0:22:41.96:376,42,0	1/1:28,0:26:23.99:206,24,0	1/1:9,0:8:5.37:35,5,0
chr10	87859232	.	AAG	A	1247.56	PASS	AB=0.987;AC=18;AF=0.321;AN=56;BaseQRankSum=4.038;DP=513;FS=4.645;HRun=0;HaplotypeScore=88.3995;InbreedingCoeff=-0.1086;MQ=57.52;MQ0=11;MQRankSum=-5.401;QD=4.44;ReadPosRankSum=-7.247;VQSLOD=-0.1495;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:42,2:42:54.97:475,55,0	0/1:5,0:5:15.88:35,0,16	0/0:16,0:7:20.92:0,21,206	0/0:15,0:12:35.34:0,35,323	0/0:22,0:22:55.84:0,56,716	0/1:12,0:12:18:71,0,18	0/1:21,0:21:55.55:56,0,79	0/0:25,0:25:68.67:0,69,847	0/0:23,0:23:58.92:0,59,798	0/1:20,0:19:9.64:168,0,10	0/1:14,1:14:37.16:69,0,37	1/1:6,0:5:7.93:48,8,0	0/0:11,0:11:26.98:0,27,324	0/1:17,0:15:13.98:90,0,14	0/0:23,0:21:56.94:0,57,772	0/0:21,0:21:51.06:0,51,680	0/1:26,1:26:66.70:136,0,67	0/1:23,0:20:21.97:22,0,113	0/1:18,0:18:36.24:36,0,43	0/1:9,0:9:4.16:20,0,4	0/0:25,0:25:62.81:0,63,849	0/1:11,1:12:16.76:17,0,24	0/0:11,0:11:32.78:0,33,459	0/0:23,0:21:24.36:0,24,634	0/0:17,0:17:41.95:0,42,560	0/1:24,0:23:45.45:105,0,45	0/1:18,0:17:42.11:50,0,42	0/1:10,0:9:21.73:22,0,38
chr10	87859233	.	AG	A	3657.89	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=8.234;DP=509;FS=2.159;HRun=1;HaplotypeScore=73.1262;InbreedingCoeff=0.9781;MQ=57.83;MQ0=10;MQRankSum=-5.085;QD=13.02;ReadPosRankSum=-4.702;VQSLOD=0.7763;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,21:42:93.07:936,93,0	1/1:5,0:5:9.26:67,9,0	0/0:16,0:7:20.83:0,21,179	0/0:15,0:12:32.87:0,33,288	0/0:21,0:21:48.38:0,48,529	1/1:9,3:12:18.21:206,18,0	1/1:20,1:21:17.07:198,17,0	0/0:25,0:25:67.04:0,67,682	0/0:22,0:22:45.91:0,46,591	1/1:16,4:19:45.13:346,45,0	1/1:12,3:14:18.51:145,19,0	1/1:6,0:5:11.91:91,12,0	0/0:11,0:11:25.85:0,26,254	1/1:15,2:15:30.40:211,30,0	0/0:22,1:21:50.12:0,50,585	0/0:21,0:21:50.82:0,51,518	1/1:27,0:26:53.76:352,54,0	1/1:23,0:21:24.97:183,25,0	1/1:19,0:19:20.01:125,20,0	1/1:8,0:8:18.74:110,19,0	0/0:24,0:24:58.85:0,59,635	1/1:8,4:12:17.63:141,18,0	0/0:11,0:11:25.86:0,26,331	0/0:22,0:20:24.13:0,24,474	0/0:17,0:17:41.90:0,42,435	1/1:23,1:23:41.69:245,42,0	1/1:19,0:18:29.89:185,30,0	1/1:7,2:8:16.14:117,16,0
chr10	87859312	.	CAG	C	1599.35	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.395;DP=522;FS=1.307;HRun=0;HaplotypeScore=81.5784;InbreedingCoeff=0.9941;MQ=87.49;MQ0=0;MQRankSum=-3.088;QD=35.54;ReadPosRankSum=2.043;VQSLOD=5.9280;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:75.26:0,75,1401	1/1:0,8:8:24.08:353,24,0	0/0:29,0:27:56.37:0,56,1138	0/0:35,0:33:85.91:0,86,1500	0/0:13,0:13:39.12:0,39,691	0/0:15,0:15:39.12:0,39,698	0/0:22,0:22:60.16:0,60,1084	0/0:26,0:26:72.20:0,72,1244	0/0:18,0:18:54.17:0,54,956	1/1:0,9:9:24.08:353,24,0	1/1:0,9:9:21.07:309,21,0	0/0:17,0:17:45.15:0,45,826	0/0:11,0:11:30.09:0,30,530	0/0:15,0:15:42.14:0,42,776	0/0:21,0:21:57.20:0,57,1059	0/0:20,0:20:60.18:0,60,1055	1/1:2,17:19:51.17:744,51,0	0/0:26,0:26:75.26:0,75,1390	0/0:14,0:14:39.13:0,39,704	0/0:8,0:8:24.08:0,24,449	0/0:50,0:50:99:0,144,2528	0/0:12,0:12:33.11:0,33,616	0/0:7,0:7:21.07:0,21,392	0/0:30,0:30:87.30:0,87,1628	0/0:25,0:25:69.10:0,69,1251	0/0:19,0:19:54.18:0,54,981	0/0:7,0:6:21.07:0,21,393	0/0:8,0:8:24.07:0,24,420
chr10	87859376	.	TGTGTGTGTGTGTGTGA	T	874.24	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=0.680;DP=597;FS=8.757;HRun=0;HaplotypeScore=202.2856;InbreedingCoeff=-0.0171;MQ=49.29;MQ0=27;MQRankSum=-0.785;QD=4.07;ReadPosRankSum=-3.592;VQSLOD=1.1760;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:30:14.79:147,0,15	0/1:7,0:7:51.63:52,0,272	0/0:40,0:13:36.40:0,36,349	0/0:38,0:21:50.32:0,50,691	0/0:16,0:15:36.08:0,36,1208	0/0:12,0:12:9.50:0,10,455	0/1:18,0:17:44.24:44,0,646	0/0:30,0:28:84.22:0,84,1857	0/0:26,0:26:72.09:0,72,2918	0/1:14,0:12:34.55:35,0,674	0/1:12,0:12:3.81:4,0,996	0/1:25,0:25:35.37:35,0,1016	0/0:11,0:11:19.42:0,19,1050	0/1:19,0:16:52.14:52,0,324	0/0:17,0:17:42.12:0,42,2106	0/0:13,0:13:33.09:0,33,1703	0/0:36,0:35:33.11:0,33,1329	0/1:26,0:26:37.11:37,0,1806	0/1:13,0:12:57.32:57,0,346	0/0:17,0:15:4.99:0,5,25	0/0:61,0:59:99:0,141,6239	0/1:13,0:13:19.85:20,0,533	0/0:12,0:11:20.59:0,21,728	0/0:39,0:38:96.22:0,96,4609	0/0:14,0:14:39.11:0,39,1875	1/1:11,1:12:15.41:237,15,0	0/1:18,0:18:14.56:15,0,44	1/1:1,4:5:8.96:303,9,0
chr10	87859378	.	TGTGTGTGTGTGTGA	T	869.62	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=2.200;DP=587;FS=9.077;HRun=0;HaplotypeScore=182.6270;InbreedingCoeff=0.0625;MQ=50.02;MQ0=26;MQRankSum=-1.672;QD=3.68;ReadPosRankSum=-2.927;VQSLOD=1.0486;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,20:28:2.65:113,3,0	0/1:7,0:7:54.63:55,0,174	0/0:39,0:13:36.37:0,36,319	0/0:36,0:21:52.47:0,52,601	0/0:16,0:15:36.04:0,36,978	0/1:12,0:12:12.37:12,0,369	0/1:15,0:14:48.85:49,0,511	0/0:29,0:27:75.15:0,75,1428	0/0:26,0:26:69.07:0,69,2496	0/1:14,0:12:63.76:64,0,521	0/1:12,0:12:3.81:4,0,825	0/1:26,0:26:60.81:61,0,786	0/0:10,0:10:19:0,19,895	0/1:18,0:15:53:53,0,246	0/0:16,0:16:42.12:0,42,1800	0/0:14,0:14:36.08:0,36,1507	0/0:37,0:36:33.11:0,33,1040	0/1:26,0:25:40.33:40,0,1437	0/1:12,0:11:57.54:58,0,208	1/1:17,0:15:4.27:23,4,0	0/0:62,0:60:99:0,122,5245	0/1:13,0:13:19.90:20,0,391	0/0:12,0:11:23.59:0,24,611	0/0:40,0:39:99:0,99,4018	0/0:14,0:14:39.10:0,39,1576	1/1:9,0:9:14.94:203,15,0	0/1:20,0:20:9.62:68,0,10	1/1:5,0:5:6.02:218,6,0
chr10	87859384	.	TGTGTGTGAGA	T	757.20	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=4.992;DP=577;FS=0.000;HRun=0;HaplotypeScore=151.1804;InbreedingCoeff=0.7608;MQ=54.87;MQ0=22;MQRankSum=-3.033;QD=9.01;ReadPosRankSum=2.230;VQSLOD=2.5123;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:0.32:1,0,0	0/0:5,0:5:7.43:0,7,99	0/0:39,0:17:48.05:0,48,836	0/0:32,0:20:57.64:0,58,1117	0/0:15,0:14:39.13:0,39,907	0/0:11,0:11:9.03:0,9,217	0/0:18,0:17:14.84:0,15,292	0/0:26,0:24:69.12:0,69,1154	0/0:25,0:25:66.23:0,66,2126	0/0:14,0:12:17.25:0,17,324	0/0:11,0:11:15.05:0,15,592	0/0:23,0:23:29.92:0,30,463	0/0:13,0:13:30.10:0,30,820	0/0:20,0:18:6.22:0,6,29	0/0:17,0:17:39.13:0,39,1364	0/0:18,0:18:45.15:0,45,1397	0/0:40,0:39:23.51:0,24,410	0/0:27,0:26:40.63:0,41,795	1/1:9,0:8:18.06:263,18,0	1/1:5,12:15:5.90:139,6,0	0/0:60,0:58:99:0,141,4118	0/0:12,0:12:13.22:0,13,182	0/0:11,0:10:21.07:0,21,474	0/0:40,0:39:99:0,99,3262	0/0:16,0:16:45.15:0,45,1312	0/1:10,0:10:2.23:54,0,2	1/1:3,15:18:11.40:322,11,0	1/1:5,0:5:6.02:125,6,0
chr10	87859388	.	TGTGA	T	2026.12	PASS	AB=0.933;AC=25;AF=0.446;AN=56;BaseQRankSum=2.882;DP=569;FS=1.988;HRun=0;HaplotypeScore=97.5077;InbreedingCoeff=0.4522;MQ=59.53;MQ0=20;MQRankSum=-0.712;QD=7.91;ReadPosRankSum=1.281;VQSLOD=2.0408;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:14.88:111,15,0	1/1:5,0:5:14.95:143,15,0	0/0:42,0:20:56.91:0,57,523	0/0:34,0:22:56.16:0,56,600	0/0:15,0:14:15.58:0,16,293	0/1:11,0:11:36.78:37,0,49	0/1:18,0:17:51.76:185,0,52	0/0:22,0:20:54.75:0,55,478	0/0:24,0:24:63.90:0,64,969	0/1:14,0:13:30.91:192,0,31	0/1:15,0:15:72.65:73,0,154	0/1:24,0:24:7.02:143,0,7	0/0:14,0:14:4.33:0,4,316	1/1:18,0:16:23.91:194,24,0	0/0:15,0:15:36.06:0,36,614	0/0:20,0:20:50.81:0,51,634	0/1:4,31:35:5.07:272,0,5	0/1:25,0:24:99:205,0,103	1/1:8,0:7:17.89:132,18,0	1/1:15,0:13:5.75:48,6,0	0/0:59,0:57:99:0,107,1640	1/1:11,0:11:9.06:127,9,0	0/0:9,0:9:20.49:0,20,143	0/0:40,0:39:96.01:0,96,1467	0/0:19,0:19:21.61:0,22,507	1/1:11,0:11:20.93:183,21,0	1/1:17,0:17:11.62:105,12,0	1/1:4,0:4:6.02:78,6,0
chr10	87859390	.	TGAGA	T	549.74	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=6.142;DP=572;FS=11.772;HRun=0;HaplotypeScore=105.0918;InbreedingCoeff=0.6208;MQ=61.48;MQ0=18;MQRankSum=-3.488;QD=4.62;ReadPosRankSum=3.323;VQSLOD=0.8178;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:0.32:1,0,0	1/1:5,0:5:1.07:22,1,0	0/0:43,0:21:60.10:0,60,1049	0/0:35,0:23:63.62:0,64,1190	0/0:14,0:14:30.57:0,31,523	0/0:11,0:11:3.28:0,3,19	0/0:17,0:16:5.67:0,6,22	0/0:22,0:21:60.20:0,60,1073	0/0:25,0:25:69.21:0,69,1308	0/0:14,0:13:11.93:0,12,53	0/0:15,0:15:14.62:0,15,223	0/0:22,0:22:13.96:0,14,101	0/0:14,0:14:24.87:0,25,506	0/0:20,0:18:3.99:0,4,10	0/0:15,0:15:36.12:0,36,782	0/0:21,0:21:50.98:0,51,919	0/1:34,0:34:7.05:128,0,7	0/0:26,0:25:10.80:0,11,89	1/1:2,6:7:18.06:263,18,0	1/1:15,0:13:6.02:79,6,0	0/0:60,0:58:99:0,141,2556	0/0:12,0:12:5.14:0,5,34	0/0:10,0:10:21.07:0,21,316	0/0:39,0:38:96.31:0,96,1896	0/0:18,0:18:45.61:0,46,808	0/1:11,0:11:3.05:12,0,3	1/1:17,0:17:11.90:160,12,0	1/1:4,0:4:5.93:41,6,0
chr10	87860543	.	TAC	T	4299.69	PASS	AB=0.926;AC=13;AF=0.232;AN=56;BaseQRankSum=13.158;DP=753;FS=5.838;HRun=0;HaplotypeScore=87.6442;InbreedingCoeff=0.9022;MQ=84.90;MQ0=1;MQRankSum=-4.413;QD=25.75;ReadPosRankSum=4.693;VQSLOD=5.8750;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,150,2470	0/0:11,0:11:30.10:0,30,495	0/0:36,0:35:68.27:0,68,1384	0/0:32,0:32:69.05:0,69,1115	0/0:25,0:25:69.24:0,69,1155	1/1:0,10:10:27.09:348,27,0	1/1:6,26:32:69.22:888,69,0	0/0:45,0:45:99:0,111,1864	0/0:30,0:30:81.28:0,81,1347	0/0:29,0:29:81.28:0,81,1367	0/0:14,0:14:39.13:0,39,658	1/1:2,27:28:75.24:965,75,0	0/0:14,0:14:33.11:0,33,557	1/1:4,19:23:45.15:579,45,0	0/0:34,0:34:99:0,99,1670	0/0:28,0:28:81.28:0,81,1366	0/0:25,0:25:69.23:0,69,1142	1/1:4,19:23:54.18:695,54,0	0/1:23,2:25:14.04:14,0,850	0/0:23,0:23:21.60:0,22,917	0/0:44,0:44:99:0,126,2107	1/1:2,23:25:63.20:811,63,0	0/0:25,0:25:51.17:0,51,843	0/0:25,0:25:72.25:0,72,1215	0/0:20,0:20:57.20:0,57,961	0/0:33,0:33:87.30:0,87,1467	0/0:29,0:29:78.25:0,78,1260	0/0:10,0:10:27.09:0,27,456
chr10	87861839	.	AG	A	241.34	PASS	AC=8;AF=0.160;AN=50;BaseQRankSum=1.364;DP=113;FS=3.468;HRun=8;HaplotypeScore=22.8829;InbreedingCoeff=0.5888;MQ=84.97;MQ0=0;MQRankSum=-3.714;QD=15.08;ReadPosRankSum=1.895;VQSLOD=2.2459;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:17.97:0,18,184	0/0:5,0:5:15.05:0,15,179	0/0:8,0:8:10.75:0,11,177	0/0:7,0:4:2.20:0,2,67	0/0:7,0:7:12.02:0,12,133	1/1:0,5:5:12.02:116,12,0	./.	0/0:9,0:9:21.06:0,21,254	0/0:6,0:6:18.06:0,18,217	0/0:3,0:3:9.03:0,9,108	0/0:2,0:2:6.02:0,6,72	1/1:0,5:5:8.98:87,9,0	0/0:3,0:3:6.02:0,6,72	./.	0/0:3,0:3:8.99:0,9,92	0/0:2,0:2:3.01:0,3,36	0/0:5,0:5:9:0,9,94	1/1:0,4:4:12.02:116,12,0	0/0:4,0:4:12.04:0,12,145	0/0:4,0:4:9.01:0,9,95	0/0:2,0:2:3.01:0,3,36	1/1:0,2:2:6.01:58,6,0	./.	0/0:3,0:3:3.01:0,3,36	0/0:8,0:8:24.06:0,24,277	0/0:3,0:3:9.02:0,9,97	0/0:5,0:5:11.98:0,12,116	0/0:1,0:1:3.01:0,3,36
chr10	87863433	.	AGAG	A	2859.46	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.221;DP=791;FS=2.040;HRun=0;HaplotypeScore=143.4950;InbreedingCoeff=0.9130;MQ=60.80;MQ0=6;MQRankSum=-2.002;QD=17.33;ReadPosRankSum=1.491;VQSLOD=3.2770;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:90.24:0,90,1712	0/0:5,0:9:4.08:0,4,76	0/0:32,0:19:14.25:0,14,251	0/0:30,0:21:7.05:0,7,191	0/0:17,0:17:42.12:0,42,755	1/1:8,18:26:39.12:536,39,0	1/1:15,16:31:7.68:320,8,0	0/0:32,0:32:39.12:0,39,551	0/0:26,0:26:51.17:0,51,986	0/0:8,0:30:71.97:0,72,849	0/0:8,0:19:27.80:0,28,398	1/1:8,21:28:42.14:595,42,0	0/0:31,0:31:78.25:0,78,1492	1/1:8,20:28:42.04:548,42,0	0/0:42,0:42:84.23:0,84,1557	0/0:33,0:33:72.23:0,72,1383	0/0:15,0:38:63.10:0,63,829	1/1:12,15:27:7.12:410,7,0	0/0:15,0:13:21.29:0,21,401	0/0:15,0:15:39.13:0,39,764	0/0:62,0:62:99:0,135,2486	1/1:5,19:23:50.95:628,51,0	0/0:15,0:15:36.12:0,36,683	0/0:40,0:40:99:0,102,1986	0/0:21,0:21:51.16:0,51,976	0/0:29,0:29:69.22:0,69,1317	0/0:32,0:30:66.15:0,66,1238	0/0:7,0:7:15.03:0,15,265
chr10	87865447	.	ACCTCTGGCTTCCAAGCAG	A	3515.15	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.274;DP=673;FS=3.317;HRun=0;HaplotypeScore=313.5891;InbreedingCoeff=0.9985;MQ=86.33;MQ0=0;MQRankSum=-6.565;QD=71.74;ReadPosRankSum=-0.973;VQSLOD=2.5344;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:96.33:0,96,7499	0/0:9,0:9:24.08:0,24,1546	0/0:21,0:21:57.20:0,57,3422	0/0:24,0:24:72.25:0,72,4494	0/0:18,0:18:54.19:0,54,4182	0/0:17,0:17:48.16:0,48,3577	0/0:32,0:32:87.28:0,87,6639	0/0:31,0:31:87.30:0,87,6400	0/0:29,0:29:78.27:0,78,6465	0/0:22,0:22:63.22:0,63,4553	0/0:18,0:18:51.16:0,51,3668	0/0:22,0:22:66.23:0,66,4937	0/0:28,0:28:78.24:0,78,5952	0/0:27,0:27:75.26:0,75,5784	0/0:21,0:21:54.17:0,54,3962	0/0:22,0:22:57.18:0,57,4452	0/0:33,0:33:96.33:0,96,7790	0/0:30,0:30:78.22:0,78,5599	1/1:7,12:19:36.08:1378,36,0	1/1:2,12:14:30.10:882,30,0	0/0:61,0:61:99:0,178,12929	0/0:24,0:24:69.24:0,69,5372	0/0:18,0:18:54.19:0,54,4126	0/0:25,0:25:66.23:0,66,5507	0/0:24,0:24:69.24:0,69,5591	0/0:21,0:21:60.21:0,60,4500	1/1:5,11:16:27.09:1255,27,0	0/0:10,0:10:30.10:0,30,2308
chr10	87866749	.	GGAAGATACCCAGTCTACTTTGCCCCT	G	1541.75	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.829;DP=724;FS=0.000;HRun=0;HaplotypeScore=447.7409;InbreedingCoeff=0.9820;MQ=91.41;MQ0=0;MQRankSum=-4.851;QD=39.53;ReadPosRankSum=1.034;VQSLOD=0.8399;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,32:39:24.08:1635,24,0	0/0:13,0:13:33.10:0,33,2478	0/0:36,0:36:81.26:0,81,4744	0/0:23,0:23:54.06:0,54,3304	0/0:34,0:34:93.14:0,93,8777	0/0:19,0:18:48.16:0,48,4948	0/0:27,0:27:72.22:0,72,6217	0/0:38,0:37:78.26:0,78,5693	0/0:19,0:19:51.15:0,51,4702	0/0:25,0:25:69.23:0,69,6722	0/0:18,0:18:48.15:0,48,4208	0/0:28,0:28:72.25:0,72,8173	0/0:25,0:25:69.22:0,69,6348	0/0:27,0:27:72.25:0,72,8020	0/0:19,0:19:51.18:0,51,5536	0/0:30,0:30:81.26:0,81,8458	0/0:43,0:43:99:0,114,10481	0/0:15,0:15:45.15:0,45,4470	0/0:24,0:24:57.15:0,57,4100	0/0:23,0:23:60.21:0,60,6030	0/0:38,0:38:99:0,102,9384	0/0:30,0:30:84.29:0,84,8468	0/0:15,0:15:36.10:0,36,3117	0/0:27,0:27:75.24:0,75,7142	0/0:23,0:23:60.20:0,60,6135	0/0:36,0:36:99:0,99,9408	0/0:23,0:22:63.22:0,63,6536	0/0:7,0:7:15.03:0,15,1355
chr10	87868070	.	AGT	A	9173.73	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=17.249;DP=1031;FS=0.569;HRun=0;HaplotypeScore=145.3245;InbreedingCoeff=0.9913;MQ=60.88;MQ0=9;MQRankSum=2.470;QD=34.23;ReadPosRankSum=3.055;VQSLOD=6.7667;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,50:53:99:1702,107,0	1/1:0,12:12:36.12:504,36,0	0/0:49,0:23:63.16:0,63,1014	0/0:65,0:46:99:0,100,1670	0/0:25,0:25:72.23:0,72,1258	0/0:25,0:25:66.23:0,66,1172	0/0:37,0:37:99:0,108,1858	0/0:45,0:43:99:0,117,2019	0/0:38,0:38:99:0,108,1908	1/1:2,24:26:75.21:1006,75,0	1/1:0,24:24:51.16:714,51,0	0/0:44,0:44:99:0,123,2185	0/0:18,0:18:48.16:0,48,856	0/0:30,0:30:84.26:0,84,1426	0/0:41,0:41:99:0,123,2185	0/0:34,0:34:93.32:0,93,1674	1/1:4,39:42:71.74:1277,72,0	0/0:39,0:39:99:0,108,1876	1/1:2,16:17:48.15:652,48,0	1/1:4,20:24:36.32:696,36,0	0/0:128,0:128:99:0,331,5774	0/0:29,0:29:80.93:0,81,1450	0/0:22,0:22:60.17:0,60,1018	0/0:74,0:74:99:0,183,3239	0/0:19,0:19:54.17:0,54,942	1/1:1,40:41:99:1615,120,0	1/1:0,22:22:63.21:882,63,0	1/1:1,4:5:9.03:126,9,0
chr10	87868901	.	GGTGTGTGTGTGTGTGTGTGT	G	2322.18	PASS	AB=0.584;AC=8;AF=0.148;AN=54;BaseQRankSum=6.168;DP=487;FS=38.374;HRun=0;HaplotypeScore=235.2721;InbreedingCoeff=0.5213;MQ=65.08;MQ0=13;MQRankSum=-5.356;QD=29.39;ReadPosRankSum=-0.558;VQSLOD=1.5585;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:25:4.83:482,5,0	0/0:4,0:4:6.02:0,6,231	0/0:24,0:15:12.04:0,12,161	0/0:24,0:17:6.01:0,6,76	0/0:9,0:9:9.03:0,9,543	0/0:11,0:11:12.04:0,12,906	0/0:27,0:28:25.99:0,26,1120	0/0:21,0:21:33.06:0,33,600	0/0:20,0:20:23.95:0,24,1450	0/0:10,0:15:21.06:0,21,456	./.	0/0:22,0:22:33.11:0,33,1708	0/0:15,0:18:36.12:0,36,2160	0/0:20,0:20:19.37:0,19,1186	0/0:11,0:11:18.05:0,18,1012	0/0:11,0:13:24.08:0,24,1442	0/0:10,0:16:39.10:0,39,974	0/0:13,0:15:30.01:0,30,1887	1/1:10,6:16:7.41:604,7,0	1/1:6,0:6:2.97:20,3,0	0/0:49,0:47:57.16:0,57,2787	0/0:14,0:14:5.49:0,5,286	0/0:12,0:12:6.02:0,6,329	0/0:36,0:38:75.24:0,75,5030	0/0:10,0:9:12.04:0,12,546	0/1:6,0:16:9.41:543,0,9	0/1:3,13:16:3.08:800,0,3	0/0:9,0:9:8.65:0,9,60
chr10	87868991	.	GGT	G	3484.75	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=13.104;DP=531;FS=3.297;HRun=0;HaplotypeScore=129.8881;InbreedingCoeff=0.7442;MQ=71.18;MQ0=0;MQRankSum=-8.475;QD=10.82;ReadPosRankSum=1.495;VQSLOD=3.5826;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:18:35.23:217,35,0	1/1:2,5:6:12.04:148,12,0	0/1:19,0:15:62.41:62,0,75	0/0:28,0:23:22.97:0,23,414	0/0:17,0:17:39.21:0,39,651	1/1:15,0:15:39.77:198,40,0	1/1:26,0:26:62.68:317,63,0	0/0:23,0:23:27.07:0,27,366	0/0:25,0:25:66.22:0,66,1056	1/1:4,8:12:24.02:257,24,0	1/1:2,9:11:27.08:330,27,0	1/1:22,0:22:51.22:258,51,0	0/0:21,0:21:56.86:0,57,816	1/1:14,0:14:36.93:184,37,0	0/0:25,0:25:69.21:0,69,1067	0/0:12,0:12:36.12:0,36,584	1/1:6,24:31:65.86:789,66,0	1/1:11,0:11:19.98:102,20,0	1/1:14,0:14:20.16:73,20,0	1/1:16,0:16:20.55:58,21,0	0/0:44,0:44:99:0,99,1479	1/1:19,0:19:42.76:216,43,0	0/1:12,0:12:36.65:37,0,154	0/1:38,0:37:36.87:37,0,449	0/0:14,0:14:39.10:0,39,576	1/1:16,1:17:11.53:79,12,0	1/1:14,0:14:20.88:87,21,0	1/1:5,0:5:5.88:35,6,0
chr10	87869000	.	GTGT	G	4854.97	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.981;DP=531;FS=1.843;HRun=0;HaplotypeScore=128.6956;InbreedingCoeff=0.9330;MQ=66.07;MQ0=2;MQRankSum=-14.124;QD=41.14;ReadPosRankSum=1.992;VQSLOD=6.3410;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:49.21:0,49,468	0/0:6,0:6:13.72:0,14,82	0/0:20,0:15:35.48:0,35,577	0/0:23,0:18:50.82:0,51,966	0/0:18,0:18:54.18:0,54,1206	1/1:2,14:16:45.14:741,45,0	1/1:2,24:26:71.72:1145,72,0	0/0:20,0:20:54.11:0,54,1010	0/0:24,0:24:72.25:0,72,1701	0/0:12,0:12:31.37:0,31,236	0/0:10,0:10:27.23:0,27,138	1/1:2,19:21:54.18:917,54,0	0/0:23,0:23:63.22:0,63,1460	1/1:4,13:17:44.46:691,44,0	0/0:26,0:26:78.27:0,78,1817	0/0:14,0:14:42.14:0,42,964	0/0:30,0:30:55.52:0,56,353	1/1:2,7:9:24.86:372,25,0	0/0:15,0:13:39.11:0,39,529	0/0:18,0:16:33.11:0,33,469	0/0:48,0:48:99:0,138,2939	1/1:2,16:18:47.81:743,48,0	0/0:12,0:12:32.76:0,33,627	0/0:39,0:38:99:0,111,2055	0/0:15,0:15:44.64:0,45,1000	1/1:2,5:7:0.04:143,0,0	0/0:16,0:15:35.72:0,36,452	1/1:0,4:4:6.02:102,6,0
chr10	87869004	.	GTGT	G	6075.90	PASS	AB=0.965;AC=21;AF=0.375;AN=56;BaseQRankSum=13.162;DP=532;FS=1.640;HRun=0;HaplotypeScore=124.3876;InbreedingCoeff=0.7422;MQ=62.40;MQ0=4;MQRankSum=-12.392;QD=30.53;ReadPosRankSum=-1.614;VQSLOD=4.9999;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,12:19:57.18:898,57,0	0/0:5,0:5:8.88:0,9,28	0/1:17,1:13:12.69:13,0,270	0/0:20,0:15:41.56:0,42,784	0/0:18,0:18:54.08:0,54,1072	1/1:16,0:16:45.13:737,45,0	1/1:27,0:27:74.56:1133,75,0	0/0:18,0:18:48.12:0,48,804	0/0:24,0:24:72.24:0,72,1583	0/0:10,0:11:13.37:0,13,112	0/0:10,0:10:20.36:0,20,80	1/1:21,0:21:55.07:913,55,0	0/0:23,0:23:63.20:0,63,1330	1/1:18,0:18:49.61:715,50,0	0/0:27,0:27:81.24:0,81,1684	0/0:14,0:14:42.13:0,42,897	0/0:29,0:30:30.92:0,31,187	1/1:9,0:9:26.94:391,27,0	0/1:16,0:14:61.03:84,0,61	0/0:19,0:17:25.20:0,25,97	0/0:48,0:48:99:0,138,2662	1/1:17,0:17:48.03:773,48,0	0/0:11,0:12:8.53:0,9,321	0/0:37,0:36:44.12:0,44,1000	0/0:16,0:16:48.15:0,48,947	1/1:12,0:12:17.36:244,17,0	0/1:17,0:16:36.18:65,0,36	1/1:5,0:5:8.39:111,8,0
chr10	87869006	.	GT	G	4006.45	PASS	AB=0.938;AC=33;AF=0.589;AN=56;BaseQRankSum=14.411;DP=537;FS=3.403;HRun=1;HaplotypeScore=113.8572;InbreedingCoeff=0.6342;MQ=62.70;MQ0=4;MQRankSum=-8.136;QD=12.33;ReadPosRankSum=0.185;VQSLOD=2.3661;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,9:22:62.94:507,63,0	1/1:5,0:5:9.49:32,9,0	0/1:15,2:12:51.61:52,0,137	0/0:19,0:15:27.50:0,28,424	0/0:18,0:18:45.21:0,45,648	1/1:16,0:16:42.75:214,43,0	1/1:26,0:26:66.45:332,66,0	0/0:18,0:18:45.09:0,45,525	0/0:25,0:25:75.16:0,75,1010	0/1:12,1:13:74.33:80,0,74	0/1:10,0:10:3.80:54,0,4	1/1:21,0:21:51.30:242,51,0	0/0:23,0:23:62.87:0,63,809	1/1:19,0:19:50.24:248,50,0	0/0:29,0:29:84.20:0,84,1094	0/0:16,0:16:48.12:0,48,636	1/1:27,1:28:23.21:137,23,0	1/1:9,0:9:25.74:134,26,0	1/1:0,16:14:42.11:526,42,0	1/1:0,18:16:30.10:418,30,0	0/0:48,0:48:99:0,138,1746	1/1:17,0:17:43.59:215,44,0	0/1:11,2:13:42.39:76,0,42	0/1:37,0:35:94.63:95,0,139	0/0:16,0:16:48.11:0,48,601	1/1:12,0:12:24.88:147,25,0	1/1:1,17:16:35.98:461,36,0	1/1:5,0:5:8.09:37,8,0
chr10	87869009	.	G	GA	1947.38	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.831;DP=548;FS=0.000;HRun=0;HaplotypeScore=125.5261;InbreedingCoeff=0.9317;MQ=63.42;MQ0=4;MQRankSum=-11.636;QD=17.08;ReadPosRankSum=-1.271;VQSLOD=4.8432;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:26:13.91:0,14,292	0/0:5,0:5:12.04:0,12,147	0/0:13,0:9:16.69:0,17,167	0/0:20,0:16:36.28:0,36,480	0/0:16,0:16:48.14:0,48,648	1/1:14,1:15:44.29:296,44,0	1/1:25,2:27:66.57:457,67,0	0/0:18,0:18:45.12:0,45,578	0/0:25,0:25:75.24:0,75,1029	0/0:14,0:14:39.08:0,39,457	0/0:11,0:11:30.06:0,30,351	1/1:20,2:22:60.29:349,60,0	0/0:23,0:23:63.17:0,63,827	1/1:18,5:23:67.87:527,68,0	0/0:29,0:29:81.26:0,81,1115	0/0:16,0:16:48.16:0,48,670	0/0:29,0:29:72.19:0,72,867	1/1:9,1:10:29.73:236,30,0	0/0:17,0:15:5.28:0,5,186	0/0:19,0:17:29.74:0,30,205	0/0:47,0:47:99:0,138,1828	1/1:15,2:17:44.50:270,45,0	0/0:13,0:13:36.89:0,37,390	0/0:36,1:35:93.64:0,94,1129	0/0:14,0:14:42.14:0,42,584	0/0:15,0:15:8.04:0,8,153	0/0:18,0:16:16.51:0,17,179	0/0:5,0:6:7.19:0,7,44
chr10	87870888	.	C	CTT	1460.27	PASS	AB=0.992;AC=26;AF=0.464;AN=56;BaseQRankSum=5.519;DP=451;FS=6.606;HRun=10;HaplotypeScore=102.9344;InbreedingCoeff=0.6309;MQ=67.01;MQ0=5;MQRankSum=-5.451;QD=6.40;ReadPosRankSum=-3.309;VQSLOD=-0.3291;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:41.83:0,42,417	1/1:7,1:8:11.96:123,12,0	0/1:26,0:15:24.11:24,0,172	0/0:32,0:15:23.78:0,24,200	0/0:14,0:15:24.39:0,24,225	0/1:10,0:10:5.07:5,0,9	1/1:15,0:15:2.51:75,3,0	0/0:23,0:21:45.02:0,45,449	0/0:17,0:17:29.99:0,30,302	1/1:10,3:13:22.61:250,23,0	1/1:3,12:14:29.40:282,29,0	1/1:14,0:15:17.14:107,17,0	0/1:13,0:13:9.58:10,0,130	1/1:11,0:11:18.38:123,18,0	0/0:23,0:23:45.03:0,45,456	0/0:16,0:17:35.70:0,36,390	1/1:18,5:24:29.56:381,30,0	1/1:3,0:7:5.10:16,5,0	0/1:27,0:29:15.55:80,0,16	1/1:17,0:19:17.37:75,17,0	0/0:9,0:9:2.65:0,3,30	1/1:4,0:4:1.25:3,1,0	0/0:10,0:10:23.98:0,24,231	0/0:17,0:16:17.06:0,17,180	0/0:6,0:6:15.02:0,15,152	0/0:16,0:16:38.90:0,39,358	1/1:15,2:18:13.37:107,13,0	0/0:6,0:6:15:0,15,152
chr10	87870899	.	CT	C	680.17	PASS	AB=0.946;AC=12;AF=0.214;AN=56;BaseQRankSum=-1.243;DP=460;FS=6.318;HRun=13;HaplotypeScore=70.9462;InbreedingCoeff=0.2736;MQ=58.63;MQ0=17;MQRankSum=0.374;QD=3.82;ReadPosRankSum=0.426;VQSLOD=0.7668;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,22:30:7.11:322,7,0	0/0:4,0:5:3:0,3,29	0/1:24,0:12:12.05:12,0,18	0/0:27,0:11:6.74:0,7,52	0/0:14,1:19:29.20:0,29,221	0/0:15,0:14:18.17:0,18,121	0/0:13,0:13:16:0,16,96	0/0:25,0:25:46.64:0,47,381	0/1:18,1:18:22.24:22,0,194	0/0:8,0:13:23.29:0,23,138	0/0:15,0:15:8.72:0,9,51	0/0:15,0:15:20.26:0,20,110	0/0:13,0:13:26.82:0,27,230	0/0:10,0:10:11.45:0,11,110	0/0:22,0:23:29.50:0,30,364	0/0:17,0:17:27.67:0,28,244	0/0:15,0:24:25.20:0,25,134	0/1:9,0:8:3.07:3,0,47	1/1:22,3:25:22.99:173,23,0	1/1:15,4:19:19.89:163,20,0	0/0:7,1:7:3:0,3,28	0/0:3,0:3:4.20:0,4,22	0/1:10,1:11:19.71:20,0,137	0/1:15,2:17:18.15:18,0,111	0/0:8,0:7:17.97:0,18,160	0/0:15,0:14:14.11:0,14,136	0/1:17,2:16:21.55:103,0,22	0/0:7,0:7:11.39:0,11,135
chr10	87871139	.	TC	T	239.19	PASS	AB=0.861;AC=9;AF=0.167;AN=54;BaseQRankSum=5.760;DP=434;FS=0.948;HRun=1;HaplotypeScore=65.1983;InbreedingCoeff=0.5907;MQ=54.58;MQ0=17;MQRankSum=-3.659;QD=4.43;ReadPosRankSum=-1.283;VQSLOD=-0.0844;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:93.21:0,93,1217	0/0:8,0:7:18.05:0,18,227	0/0:13,0:3:5.80:0,6,43	0/1:12,0:5:3.71:4,0,7	0/0:15,0:15:35.99:0,36,485	0/1:5,1:6:3.22:31,0,3	1/1:9,3:10:13.31:126,13,0	0/0:32,0:30:76.89:0,77,932	0/0:14,0:14:41.86:0,42,538	0/0:20,1:18:48.29:0,48,609	0/0:15,0:15:42.10:0,42,534	1/1:3,1:4:5.94:41,6,0	0/0:10,0:10:30.07:0,30,383	1/1:1,11:11:5.65:93,6,0	0/0:12,0:11:30.10:0,30,415	0/0:16,0:16:45.08:0,45,573	0/0:35,0:35:91.94:0,92,1172	0/1:5,3:7:43.31:83,0,43	0/0:31,0:26:78.15:0,78,1020	0/0:8,0:8:24.08:0,24,329	0/0:12,0:11:33.09:0,33,442	./.	0/0:13,0:13:33.08:0,33,426	0/0:30,0:29:81.16:0,81,1049	0/0:12,0:12:36.12:0,36,502	0/0:20,0:18:15.80:0,16,242	0/0:19,0:17:45.06:0,45,584	0/0:7,0:7:10.96:0,11,60
chr10	87871141	.	TTTTTC	T	1124.30	PASS	AB=0.962;AC=14;AF=0.259;AN=54;BaseQRankSum=1.284;DP=435;FS=1.072;HRun=0;HaplotypeScore=88.4600;InbreedingCoeff=-0.1932;MQ=54.58;MQ0=17;MQRankSum=-0.589;QD=5.13;ReadPosRankSum=-2.962;VQSLOD=1.2532;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:32:99:198,0,1094	0/1:8,0:7:36.95:37,0,86	0/0:15,0:3:5.85:0,6,37	0/0:11,0:4:0.57:0,1,38	0/0:15,0:15:39.05:0,39,729	0/1:6,0:6:26.24:26,0,47	0/1:12,0:10:13.25:19,0,13	0/0:31,0:29:63.08:0,63,788	0/0:14,0:14:36.05:0,36,632	0/1:22,0:19:68.23:68,0,507	0/1:15,0:15:24.79:25,0,327	0/1:4,0:4:13.73:14,0,14	0/0:11,0:11:33:0,33,536	0/0:12,0:11:4.91:0,5,15	0/0:12,0:11:29.99:0,30,597	0/0:16,0:16:39.54:0,40,829	0/1:35,0:35:99:173,0,578	0/0:7,0:6:9.60:0,10,56	0/1:30,0:26:99:167,0,829	0/1:8,0:8:7.61:8,0,316	0/0:12,0:11:33.04:0,33,619	./.	0/0:13,0:13:30.05:0,30,613	0/0:31,0:30:75.04:0,75,1401	0/0:15,0:15:44.94:0,45,891	0/1:3,16:17:31.47:304,0,31	0/1:19,0:17:52.39:52,0,545	1/1:2,5:7:9.03:186,9,0
chr10	87871145	.	TC	T	470.12	PASS	AB=0.950;AC=14;AF=0.259;AN=54;BaseQRankSum=6.554;DP=417;FS=3.177;HRun=1;HaplotypeScore=62.6217;InbreedingCoeff=0.7169;MQ=54.61;MQ0=16;MQRankSum=-2.173;QD=6.44;ReadPosRankSum=-0.478;VQSLOD=0.5037;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:84.43:0,84,441	0/0:7,0:6:11.78:0,12,91	0/0:15,0:3:1.19:0,1,16	0/1:8,1:4:8.01:8,0,27	0/0:15,0:15:38.54:0,39,392	1/1:5,0:5:3.64:30,4,0	1/1:9,2:9:12.86:110,13,0	0/0:30,0:28:74.47:0,74,778	0/0:13,0:13:36.07:0,36,415	0/0:21,0:18:44.39:0,44,402	0/0:14,0:14:24.43:0,24,253	1/1:5,0:4:5.94:41,6,0	0/0:11,0:11:32.73:0,33,288	1/1:10,2:11:11.98:122,12,0	0/0:14,0:13:36.02:0,36,397	0/0:14,0:14:39.10:0,39,449	0/0:34,0:34:81.24:0,81,691	1/1:5,1:5:9.54:104,10,0	0/0:28,0:24:69.31:0,69,429	0/0:8,0:8:23.29:0,23,146	0/0:12,0:11:33.09:0,33,391	./.	0/0:12,0:12:30.09:0,30,366	0/0:29,0:28:75.10:0,75,848	0/0:15,0:15:44.41:0,44,471	0/1:19,0:17:4.20:160,0,4	0/0:18,0:16:33.02:0,33,220	1/1:6,0:6:8.93:63,9,0
chr10	87871146	.	C	CT	2547.61	PASS	AB=0.962;AC=24;AF=0.444;AN=54;BaseQRankSum=1.160;DP=428;FS=0.976;HRun=10;HaplotypeScore=56.7488;InbreedingCoeff=0.6550;MQ=54.28;MQ0=17;MQRankSum=-1.727;QD=11.22;ReadPosRankSum=2.122;VQSLOD=2.8617;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:33:81.04:844,81,0	1/1:7,0:6:5.98:49,6,0	0/0:16,0:3:5.85:0,6,36	0/1:9,0:4:0.56:1,0,20	0/0:16,0:16:29.79:0,30,244	0/1:6,0:6:7.02:7,0,15	0/0:12,0:9:2.33:0,2,18	0/0:30,0:28:59.38:0,59,477	0/0:13,0:13:29.96:0,30,246	1/1:21,0:18:37.83:237,38,0	1/1:15,0:15:14.32:102,14,0	0/1:6,0:5:0:0,0,0	0/1:9,2:11:39.93:40,0,123	0/0:12,0:11:4.60:0,5,12	0/0:14,0:13:29.93:0,30,243	0/0:14,0:14:32.71:0,33,267	1/1:34,0:34:59.85:391,60,0	0/0:6,0:5:6.91:0,7,29	1/1:10,19:25:50.96:525,51,0	1/1:3,6:9:15.04:160,15,0	0/0:12,0:11:26.94:0,27,219	./.	0/0:12,0:12:29.97:0,30,246	0/0:28,0:27:62.89:0,63,512	0/0:15,0:15:38.94:0,39,319	1/1:19,0:17:15.66:141,16,0	1/1:8,10:16:2.76:230,3,0	1/1:7,0:6:3.99:11,4,0
chr10	87871156	.	T	TC	1748.50	PASS	AB=0.813;AC=12;AF=0.214;AN=56;BaseQRankSum=2.390;DP=409;FS=0.000;HRun=1;HaplotypeScore=58.3846;InbreedingCoeff=0.1978;MQ=54.25;MQ0=19;MQRankSum=-0.900;QD=9.82;ReadPosRankSum=4.333;VQSLOD=1.4189;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:33:25.96:153,26,0	0/1:1,4:5:9.47:71,0,9	0/0:17,0:3:5.83:0,6,33	0/0:10,0:3:4.56:0,5,40	0/0:19,0:19:39.08:0,39,450	0/1:4,0:5:4.70:5,0,45	0/0:12,0:8:11.87:0,12,91	0/0:27,0:25:69.03:0,69,798	0/0:11,0:11:33.10:0,33,414	1/1:7,13:20:27.17:502,27,0	0/1:3,7:12:5.69:193,0,6	0/0:5,0:4:8.92:0,9,65	0/0:9,0:9:13.14:0,13,239	0/0:8,0:7:8.82:0,9,62	0/0:13,0:12:33.05:0,33,393	0/0:13,0:13:33.06:0,33,382	0/1:7,27:36:2.09:811,0,2	0/0:7,0:6:16.19:0,16,99	0/1:23,0:20:22.77:69,0,23	0/1:8,0:8:16.82:17,0,31	0/0:15,0:13:33.07:0,33,378	0/0:1,0:1:2.97:0,3,20	0/0:16,0:16:42.05:0,42,480	0/0:25,0:24:66.19:0,66,825	0/0:16,0:16:48.10:0,48,577	0/1:19,0:18:34.45:41,0,34	0/1:13,0:12:43.62:44,0,48	0/0:7,0:5:8.72:0,9,57
chr10	87871233	.	C	CCCTAGGCTTTTCTTTTT	7273.93	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.168;DP=406;FS=16.766;HRun=0;HaplotypeScore=168.2820;InbreedingCoeff=0.9526;MQ=62.75;MQ0=8;MQRankSum=-8.874;QD=169.16;ReadPosRankSum=-0.380;VQSLOD=3.7072;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:66.23:0,66,3247	0/0:4,0:4:9.03:0,9,449	0/0:14,0:9:27.09:0,27,1043	0/0:17,0:12:32.85:0,33,1359	0/0:16,0:15:39.13:0,39,1813	1/1:4,4:8:18.06:1385,18,0	1/1:5,2:5:15.05:1115,15,0	0/0:17,0:17:48.16:0,48,2180	0/0:8,0:7:21.07:0,21,927	0/0:18,0:17:45.15:0,45,1889	0/0:21,0:21:54.18:0,54,2248	1/1:8,3:10:27.09:1737,27,0	0/0:11,0:11:30.10:0,30,1418	1/1:9,1:11:27.09:1735,27,0	0/0:12,0:12:36.12:0,36,1736	0/0:10,0:10:30.09:0,30,1373	0/0:33,0:33:81.20:0,81,3349	1/1:2,0:2:6.02:504,6,0	0/0:17,0:16:48.16:0,48,2210	0/0:11,0:11:30.06:0,30,1364	0/0:24,0:23:66.21:0,66,3109	1/1:3,1:4:12.04:798,12,0	0/0:20,0:20:51.18:0,51,2131	0/0:26,0:26:75.26:0,75,3390	0/0:9,0:9:21.07:0,21,1029	0/0:19,0:19:54.19:0,54,2464	0/0:20,0:19:54.19:0,54,2602	0/0:11,0:10:30.06:0,30,1368
chr10	87871318	.	AAG	A	818.86	PASS	AB=0.909;AC=15;AF=0.268;AN=56;BaseQRankSum=4.029;DP=389;FS=10.791;HRun=0;HaplotypeScore=53.3456;InbreedingCoeff=0.4779;MQ=58.90;MQ0=6;MQRankSum=-2.650;QD=8.19;ReadPosRankSum=-5.017;VQSLOD=0.7151;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:37.06:0,37,797	0/0:3,0:3:9.03:0,9,153	0/0:33,0:10:22.52:0,23,199	0/0:21,0:3:4.26:0,4,54	0/0:14,0:14:35.86:0,36,571	1/1:4,2:6:12.04:176,12,0	1/1:1,8:9:8.99:100,9,0	0/0:24,0:23:60.18:0,60,858	0/0:11,0:11:28.23:0,28,409	0/1:11,0:11:23.39:23,0,306	0/0:9,0:9:27.01:0,27,376	1/1:8,1:9:23.99:290,24,0	0/0:6,0:6:13.11:0,13,187	1/1:6,2:8:17.92:190,18,0	0/0:10,0:10:16.86:0,17,242	0/0:13,0:13:12.26:0,12,410	0/0:40,0:40:78.95:0,79,1411	0/1:1,5:6:41.81:79,0,42	0/1:22,0:20:0.81:1,0,531	0/0:17,0:16:42.57:0,43,515	0/1:9,0:9:5.16:5,0,261	1/1:0,5:4:8.99:101,9,0	0/0:11,0:11:6.17:0,6,351	0/0:14,0:13:35.58:0,36,432	0/0:14,0:14:14.95:0,15,374	0/1:15,0:15:25.88:26,0,401	0/0:16,0:15:2.17:0,2,415	0/0:11,0:11:13.17:0,13,169
chr10	87871439	.	CTT	C	1271.17	PASS	AB=0.723;AC=12;AF=0.214;AN=56;BaseQRankSum=5.926;DP=484;FS=3.620;HRun=12;HaplotypeScore=61.1695;InbreedingCoeff=0.7621;MQ=64.59;MQ0=5;MQRankSum=0.082;QD=12.46;ReadPosRankSum=3.903;VQSLOD=1.9847;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:84.74:0,85,1228	0/0:5,0:6:15.04:0,15,208	0/0:14,0:11:11.06:0,11,155	0/1:12,0:7:22.32:22,0,23	0/0:12,0:12:26.96:0,27,325	1/1:0,12:11:24.04:244,24,0	1/1:6,12:18:27.03:275,27,0	0/0:29,0:30:50.76:0,51,608	0/0:11,0:12:24.07:0,24,335	0/0:23,0:24:47.47:0,47,721	0/0:12,0:12:22.27:0,22,273	1/1:2,10:12:21.04:214,21,0	0/0:11,0:11:21.01:0,21,253	1/1:4,13:17:30.01:292,30,0	0/0:10,0:11:24.06:0,24,320	0/0:13,0:13:30.08:0,30,422	0/0:33,0:36:88.98:0,89,1184	0/1:5,14:19:71.58:290,0,72	0/0:14,0:14:24.08:0,24,357	0/0:17,0:17:41.63:0,42,575	0/0:18,0:21:52.58:0,53,647	1/1:5,4:9:11.97:114,12,0	0/0:15,0:15:36.08:0,36,473	0/0:14,1:16:14.64:0,15,556	0/0:19,0:19:48.06:0,48,606	0/0:18,0:20:38.61:0,39,511	0/0:24,0:26:57.83:0,58,717	0/0:10,0:10:15.05:0,15,223
chr10	87872011	.	CGT	C	3976.08	PASS	AB=0.887;AC=36;AF=0.667;AN=54;BaseQRankSum=5.320;DP=788;FS=10.111;HRun=0;HaplotypeScore=123.6369;InbreedingCoeff=0.1842;MQ=56.14;MQ0=11;MQRankSum=-0.064;QD=6.02;ReadPosRankSum=2.477;VQSLOD=2.5377;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,1:45:19:180,19,0	1/1:4,1:14:19.68:97,20,0	./.	0/0:19,0:7:3:0,3,25	0/0:20,2:22:14.06:0,14,565	1/1:8,11:20:35.77:368,36,0	1/1:15,25:40:0.69:430,1,0	0/1:28,4:31:68.64:69,0,177	0/0:31,0:30:24.12:0,24,643	0/1:11,0:30:32.25:131,0,32	1/1:9,0:21:8.41:42,8,0	1/1:16,11:26:27.79:288,28,0	0/1:18,6:24:99:119,0,430	1/1:15,9:25:29.28:292,29,0	0/0:40,1:41:16:0,16,974	0/1:14,2:17:80.64:81,0,268	1/1:5,0:19:25.57:125,26,0	1/1:13,19:31:34.48:405,34,0	1/1:12,9:21:27.01:291,27,0	1/1:14,1:17:23.58:207,24,0	0/1:76,4:83:63.01:63,0,970	1/1:15,18:32:41.91:452,42,0	0/1:18,2:19:41.09:41,0,223	0/1:49,2:52:8.04:8,0,1273	0/1:17,1:19:25.16:25,0,444	0/1:27,1:28:2.72:3,0,242	1/1:13,10:23:23.87:258,24,0	0/1:13,0:12:0.82:1,0,133
chr10	87872013	.	T	TGC	1018.45	PASS	AB=0.912;AC=7;AF=0.125;AN=56;BaseQRankSum=-1.603;DP=786;FS=1.636;HRun=0;HaplotypeScore=137.8190;InbreedingCoeff=0.1401;MQ=55.90;MQ0=11;MQRankSum=1.304;QD=6.49;ReadPosRankSum=-1.640;VQSLOD=2.7018;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:44:61.03:0,61,598	0/0:15,0:14:10.98:0,11,151	0/0:11,0:3:2.17:0,2,47	0/0:18,0:5:12:0,12,110	0/0:21,0:21:54.02:0,54,667	0/1:20,0:20:1.11:1,0,240	0/1:40,0:39:28.52:29,0,313	0/0:32,0:31:35.02:0,35,626	0/0:33,0:32:80.53:0,81,908	0/0:30,0:30:51.41:0,51,548	0/0:20,0:20:17.73:0,18,140	0/0:28,0:26:27.60:0,28,369	0/0:25,0:25:56.01:0,56,651	0/0:25,0:25:46.71:0,47,428	0/0:42,0:42:99:0,108,1282	0/0:16,0:16:44.87:0,45,477	0/0:19,0:19:38.80:0,39,294	0/0:32,0:31:55.04:0,55,422	0/0:21,0:21:51.06:0,51,338	0/0:17,0:17:8.03:0,8,187	0/0:83,0:82:9.20:0,9,1409	0/1:34,0:33:49.38:49,0,259	0/0:23,0:22:43.35:0,43,500	0/0:51,0:51:99:0,141,1744	0/0:21,0:21:27.67:0,28,550	1/1:6,21:27:1.31:732,1,0	0/1:22,0:22:5.08:5,0,214	0/1:3,9:13:4:315,0,4
chr10	87874036	.	TCTTTC	T	673.95	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=1.941;DP=364;FS=3.764;HRun=0;HaplotypeScore=84.6945;InbreedingCoeff=0.5473;MQ=67.12;MQ0=3;MQRankSum=-4.604;QD=9.23;ReadPosRankSum=-1.377;VQSLOD=2.0964;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:25.16:0,25,515	0/0:9,0:9:17.43:0,17,289	0/0:18,0:13:35.72:0,36,474	0/0:17,0:12:23.27:0,23,356	0/0:17,0:17:30.36:0,30,743	1/1:14,0:13:32.48:301,32,0	0/1:10,0:10:23.30:84,0,23	0/0:14,0:12:23.44:0,23,470	0/0:15,0:15:5.18:0,5,512	0/1:8,0:8:1:1,0,302	0/0:16,0:16:38.93:0,39,544	1/1:12,0:11:23.33:221,23,0	0/0:10,0:10:28.91:0,29,580	0/1:6,0:6:1.58:24,0,2	0/0:9,0:9:24.02:0,24,477	0/0:12,0:12:36.10:0,36,654	0/0:17,0:16:28.53:0,29,383	0/1:18,0:18:52.57:136,0,53	0/0:14,0:14:13.68:0,14,464	0/0:15,0:15:31.73:0,32,419	0/0:12,0:12:27.56:0,28,557	1/1:0,5:5:5.99:59,6,0	0/0:6,0:6:15.05:0,15,254	0/0:20,0:19:47.62:0,48,920	0/0:9,0:9:24.49:0,24,408	0/0:13,0:12:11.29:0,11,354	0/0:15,0:15:42.27:0,42,663	0/0:10,0:10:21.02:0,21,376
chr10	87874037	.	CTTTCTT	C	1287.91	PASS	AB=0.876;AC=8;AF=0.143;AN=56;BaseQRankSum=-1.470;DP=424;FS=5.819;HRun=0;HaplotypeScore=110.8961;InbreedingCoeff=0.3749;MQ=61.73;MQ0=4;MQRankSum=-2.602;QD=14.80;ReadPosRankSum=-0.712;VQSLOD=2.5046;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:6.48:0,6,577	0/0:11,0:10:21.91:0,22,275	0/0:17,0:12:29.15:0,29,483	0/0:18,0:12:11.23:0,11,308	0/0:18,0:18:42.05:0,42,855	0/1:15,3:19:14.77:416,0,15	0/1:14,2:16:29.74:228,0,30	0/0:16,0:14:27.28:0,27,497	0/0:15,0:15:29.66:0,30,679	0/0:10,0:10:18.32:0,18,326	0/0:23,0:22:56.92:0,57,714	1/1:13,1:14:10.37:286,10,0	0/0:11,0:11:33.03:0,33,759	1/1:7,0:7:9.53:83,10,0	0/0:9,0:9:18.02:0,18,450	0/0:12,0:12:32.90:0,33,614	0/0:20,0:19:23.66:0,24,415	0/1:15,3:21:11.08:402,0,11	0/0:15,0:15:28.05:0,28,362	0/0:18,0:18:42.78:0,43,534	0/0:12,0:12:14.49:0,14,584	0/1:7,0:7:12.61:13,0,23	0/0:6,0:6:15.48:0,15,226	0/0:20,0:19:45.06:0,45,1045	0/0:9,0:9:25.11:0,25,542	0/0:18,0:16:42.61:0,43,574	0/0:22,0:21:53.27:0,53,798	0/0:11,0:11:20.98:0,21,356
chr10	87874041	.	CTT	C	828.47	PASS	AB=0.840;AC=23;AF=0.411;AN=56;BaseQRankSum=5.294;DP=456;FS=4.098;HRun=17;HaplotypeScore=92.6636;InbreedingCoeff=0.2428;MQ=54.90;MQ0=10;MQRankSum=-4.589;QD=3.01;ReadPosRankSum=4.215;VQSLOD=-0.5837;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,2:26:20.88:82,0,21	1/1:9,3:11:8.26:68,8,0	0/0:17,0:12:5.99:0,6,59	0/0:14,0:8:9.02:0,9,101	0/0:21,0:22:31.73:0,32,326	1/1:21,0:20:8.39:118,8,0	1/1:18,0:18:6.40:113,6,0	0/1:13,1:14:2.31:2,0,153	0/0:14,0:16:26.87:0,27,256	0/1:8,1:10:8.21:24,0,8	0/1:18,4:22:35.32:35,0,62	0/1:15,0:14:18.74:19,0,31	0/0:11,0:11:30.05:0,30,346	1/1:7,0:7:2.81:18,3,0	0/0:7,0:8:12.01:0,12,136	0/0:11,0:11:17.52:0,18,175	1/1:14,5:18:11.49:87,11,0	1/1:24,0:22:16.09:111,16,0	0/1:11,3:15:16.18:81,0,16	0/1:11,9:20:21.65:122,0,22	0/0:15,0:17:26.80:0,27,253	1/1:7,0:7:2.36:16,2,0	0/0:5,0:6:5.38:0,5,44	0/0:22,0:22:30:0,30,376	0/1:8,1:9:1.46:1,0,188	0/0:20,1:19:6.77:0,7,135	0/1:22,7:28:47.49:107,0,47	0/0:8,1:12:13.21:0,13,83
chr10	87874045	.	T	TC	74.95	PASS	AB=0.880;AC=5;AF=0.089;AN=56;BaseQRankSum=4.985;DP=497;FS=45.560;HRun=0;HaplotypeScore=102.0918;InbreedingCoeff=-0.0964;MQ=51.70;MQ0=15;MQRankSum=-3.909;QD=0.82;ReadPosRankSum=3.507;VQSLOD=-0.0805;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:78.43:0,78,571	0/0:13,0:12:27.78:0,28,220	0/1:17,0:12:0.51:1,0,132	0/0:13,0:7:11.01:0,11,108	0/0:21,0:21:57.53:0,58,504	0/1:17,5:21:74.92:75,0,214	0/1:13,6:19:47.53:48,0,218	0/0:17,0:15:28.27:0,28,265	0/0:15,0:14:31.57:0,32,317	0/0:11,0:11:31.17:0,31,233	0/0:25,0:24:62.26:0,62,443	0/0:16,0:15:29.32:0,29,243	0/0:11,0:11:32.22:0,32,279	0/0:6,1:7:3.62:0,4,68	0/0:12,0:10:26.76:0,27,228	0/0:10,0:10:29.25:0,29,276	0/0:21,0:18:32.48:0,32,231	0/1:22,2:22:33.97:34,0,160	0/0:17,0:17:46.19:0,46,241	0/0:24,0:23:51.07:0,51,308	0/0:19,0:19:44.67:0,45,390	0/1:8,1:8:26.99:27,0,44	0/0:8,0:8:20.89:0,21,168	0/0:25,0:23:56.49:0,56,508	0/0:11,0:11:29.89:0,30,274	0/0:28,0:24:60.97:0,61,436	0/0:32,0:31:77.76:0,78,451	0/0:16,0:14:26.77:0,27,210
chr10	87874579	.	CT	C	2326.88	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.173;DP=490;FS=0.000;HRun=6;HaplotypeScore=52.6730;InbreedingCoeff=0.9685;MQ=78.87;MQ0=0;MQRankSum=0.344;QD=22.81;ReadPosRankSum=2.603;VQSLOD=2.7392;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.25:0,78,1020	0/0:2,0:2:6.02:0,6,79	0/0:17,1:19:10.43:0,10,417	0/0:17,0:15:22.37:0,22,297	0/0:17,0:17:45.14:0,45,579	1/1:0,22:22:54.14:580,54,0	1/1:3,15:18:33.08:355,33,0	0/0:18,0:18:48.14:0,48,597	0/0:17,0:17:51.17:0,51,669	0/0:23,0:23:66.14:0,66,817	0/0:15,0:15:42.14:0,42,552	1/1:0,11:11:24.06:258,24,0	0/0:12,0:12:36.12:0,36,468	1/1:0,12:12:33.08:355,33,0	0/0:19,0:19:57.18:0,57,744	0/0:10,0:10:24.08:0,24,316	0/0:28,0:28:81.24:0,81,1033	1/1:2,16:18:42.10:451,42,0	0/0:18,0:18:54.14:0,54,688	0/0:20,0:20:54.18:0,54,709	0/0:14,0:14:42.09:0,42,504	1/1:0,21:21:48.12:516,48,0	0/0:9,0:9:24.06:0,24,301	0/0:17,0:17:45.15:0,45,592	0/0:26,0:26:75.23:0,75,971	0/0:22,0:22:54.18:0,54,710	0/0:24,0:23:69.21:0,69,891	0/0:12,0:12:36.12:0,36,472
chr10	87875052	.	TA	T	4840.92	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=12.601;DP=579;FS=1.080;HRun=9;HaplotypeScore=59.7469;InbreedingCoeff=0.9977;MQ=74.43;MQ0=0;MQRankSum=0.003;QD=22.94;ReadPosRankSum=2.565;VQSLOD=5.7439;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,41:46:99:1042,114,0	1/1:1,8:9:21.01:192,21,0	0/0:13,0:11:18.43:0,18,163	0/0:18,0:16:23.91:0,24,209	0/0:28,0:28:84.18:0,84,905	0/0:20,0:20:57.15:0,57,644	0/0:30,0:30:87.20:0,87,956	0/0:34,0:34:87.22:0,87,963	0/0:13,0:13:33.08:0,33,369	1/1:4,17:21:51.01:463,51,0	1/1:0,16:16:47.80:408,48,0	0/0:18,0:18:48.12:0,48,537	0/0:14,0:14:36.10:0,36,407	0/0:20,0:20:51.15:0,51,588	0/0:29,0:29:87.13:0,87,931	0/0:21,0:21:57.14:0,57,631	1/1:2,27:29:75.04:686,75,0	0/0:18,0:19:57:0,57,637	1/1:3,18:21:54.02:490,54,0	1/1:2,17:19:44.98:404,45,0	0/0:16,0:16:45.11:0,45,499	0/0:14,0:14:36.09:0,36,405	0/0:27,0:27:69.16:0,69,780	0/0:17,0:17:48.14:0,48,553	0/0:16,0:16:39.09:0,39,431	1/1:4,19:23:56.94:499,57,0	1/1:1,17:18:45.02:411,45,0	1/1:0,9:9:27.01:247,27,0
chr10	87875431	.	C	CTATAA	5556.82	PASS	AB=0.637;AC=4;AF=0.071;AN=56;BaseQRankSum=13.640;DP=645;FS=0.000;HRun=0;HaplotypeScore=159.9320;InbreedingCoeff=-0.0761;MQ=59.63;MQ0=5;MQRankSum=-13.196;QD=51.93;ReadPosRankSum=4.345;VQSLOD=5.2637;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,21:34:99:1737,0,184	0/0:7,0:7:21.07:0,21,489	0/0:28,0:22:60.19:0,60,1277	0/0:20,0:11:33.11:0,33,768	0/0:34,0:33:96.79:0,97,2147	0/0:15,0:15:45.15:0,45,1031	0/0:31,0:31:93.31:0,93,2123	0/0:21,0:21:60.19:0,60,1299	0/0:27,0:27:81.27:0,81,1843	0/0:32,0:32:84.14:0,84,1831	0/0:22,0:22:60.17:0,60,1206	0/0:22,0:22:66.21:0,66,1487	0/0:22,0:22:63.20:0,63,1410	0/0:21,0:21:60.21:0,60,1382	0/0:20,0:20:60.21:0,60,1392	0/0:28,0:28:81.26:0,81,1810	0/0:24,0:24:72.23:0,72,1624	0/0:17,0:17:48.16:0,48,1118	0/1:12,8:20:26.96:912,0,27	0/1:10,18:28:41.48:1480,0,41	0/0:40,0:40:99:0,117,2678	0/0:12,0:12:36.11:0,36,796	0/0:20,0:20:54.19:0,54,1237	0/0:24,0:24:72.25:0,72,1678	0/0:10,0:10:30.09:0,30,644	0/0:31,0:30:90.29:0,90,1999	0/1:8,16:24:99:1428,0,109	0/0:10,0:10:30.10:0,30,699
chr10	87875432	.	C	CGGGATCT	8420.64	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.112;DP=646;FS=2.424;HRun=0;HaplotypeScore=175.6025;InbreedingCoeff=0.9983;MQ=59.71;MQ0=5;MQRankSum=-12.806;QD=78.70;ReadPosRankSum=1.093;VQSLOD=4.8907;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,20:34:85.93:2535,86,0	0/0:7,0:7:21.07:0,21,560	0/0:30,0:24:42.11:0,42,1307	0/0:21,0:12:33.11:0,33,854	0/0:33,0:32:90.78:0,91,2245	0/0:15,0:15:45.14:0,45,1121	0/0:30,0:30:90.31:0,90,2411	0/0:23,0:23:60.09:0,60,1427	0/0:27,0:27:78.27:0,78,2047	0/0:30,0:30:83.83:0,84,1858	0/0:21,0:21:57:0,57,1207	0/0:22,0:22:66.22:0,66,1687	0/0:22,0:22:63.12:0,63,1548	0/0:21,0:21:60.21:0,60,1541	0/0:20,0:20:60.21:0,60,1579	0/0:27,0:27:78.23:0,78,1917	0/0:26,0:26:69.22:0,69,1800	0/0:17,0:17:48.16:0,48,1292	1/1:12,8:20:38.70:1358,39,0	1/1:10,18:28:81.23:2384,81,0	0/0:40,0:40:99:0,114,2990	0/0:12,0:12:36.09:0,36,864	0/0:20,0:20:54.14:0,54,1347	0/0:24,0:24:72.25:0,72,1935	0/0:9,0:9:27.06:0,27,661	0/0:30,0:29:84.25:0,84,2130	1/1:8,16:24:72.18:2143,72,0	0/0:12,0:11:30.10:0,30,808
chr10	87875726	.	A	ATT	3698.90	PASS	AB=0.838;AC=25;AF=0.446;AN=56;BaseQRankSum=4.813;DP=494;FS=17.990;HRun=13;HaplotypeScore=80.6070;InbreedingCoeff=0.7858;MQ=69.00;MQ0=5;MQRankSum=-3.477;QD=14.91;ReadPosRankSum=-1.761;VQSLOD=0.4761;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:23,11:35:60.44:681,60,0	1/1:1,0:2:2.50:9,2,0	0/0:31,1:13:9.99:0,10,70	0/0:29,0:16:12.67:0,13,73	0/0:18,0:18:38.96:0,39,343	1/1:8,10:18:45.06:547,45,0	1/1:9,10:20:45.82:544,46,0	0/0:23,0:24:52.79:0,53,437	0/0:13,0:13:20.97:0,21,185	1/1:13,1:27:33.24:144,33,0	0/1:12,2:15:3.75:113,0,4	1/1:4,13:19:26.76:337,27,0	0/0:12,0:12:29.92:0,30,262	1/1:8,2:11:18.05:228,18,0	0/1:9,0:9:0.35:0,0,44	0/0:13,0:13:8.74:0,9,79	1/1:13,0:24:27.31:113,27,0	1/1:15,12:27:60.39:680,60,0	0/0:27,0:30:57.26:0,57,461	0/0:11,0:11:17.94:0,18,158	0/0:11,0:12:26.67:0,27,221	1/1:1,3:5:11.53:131,12,0	0/0:7,0:7:14.99:0,15,132	0/0:22,0:23:45.48:0,45,376	0/0:12,0:12:23.96:0,24,211	0/1:15,0:23:15.19:80,0,15	0/0:8,0:9:23.68:0,24,197	1/1:3,0:7:17.86:92,18,0
chr10	87875819	.	A	AC	1917.20	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=2.949;DP=533;FS=16.304;HRun=4;HaplotypeScore=112.9689;InbreedingCoeff=0.9977;MQ=65.41;MQ0=2;MQRankSum=0.984;QD=32.49;ReadPosRankSum=2.219;VQSLOD=1.9476;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1121	1/1:0,8:8:24.08:327,24,0	0/0:15,0:15:30.98:0,31,305	0/0:16,0:11:32.99:0,33,332	0/0:18,0:18:51.13:0,51,565	0/0:27,0:27:76.24:0,76,758	0/0:19,0:19:47.79:0,48,447	0/0:23,0:22:60.14:0,60,661	0/0:17,0:17:51.13:0,51,568	1/1:1,13:14:36.12:491,36,0	1/1:2,11:13:33.11:444,33,0	0/0:14,0:14:39.04:0,39,401	0/0:17,0:17:51.14:0,51,575	0/0:13,0:13:36.09:0,36,380	0/0:17,0:17:51.15:0,51,578	0/0:17,0:17:51.15:0,51,578	1/1:2,22:24:60.20:814,60,0	0/0:27,0:27:75.13:0,75,792	0/0:23,0:23:63.18:0,63,712	0/0:23,0:23:48.08:0,48,528	0/0:37,0:37:99:0,108,1204	0/0:13,0:13:36.07:0,36,372	0/0:13,0:12:30.09:0,30,340	0/0:27,0:27:78.22:0,78,884	0/0:15,0:15:42.12:0,42,474	0/0:24,0:24:72.09:0,72,712	0/0:15,0:15:42.10:0,42,465	0/0:9,0:9:21:0,21,209
chr10	87875829	.	CGA	C	5460.26	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.014;DP=575;FS=3.249;HRun=0;HaplotypeScore=116.4028;InbreedingCoeff=0.9990;MQ=71.42;MQ0=2;MQRankSum=-5.624;QD=35.00;ReadPosRankSum=1.654;VQSLOD=6.7488;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,1994	0/0:9,0:9:27.08:0,27,449	0/0:16,0:16:40.67:0,41,664	0/0:21,0:16:39.12:0,39,609	0/0:19,0:19:54.18:0,54,951	1/1:3,24:27:66.22:901,66,0	1/1:1,17:18:51.17:700,51,0	0/0:24,0:23:60.21:0,60,1053	0/0:19,0:19:57.20:0,57,1011	0/0:14,0:14:39.13:0,39,690	0/0:14,0:14:36.12:0,36,634	1/1:0,13:13:39.13:536,39,0	0/0:22,0:22:60.16:0,60,987	1/1:0,16:16:39.13:535,39,0	0/0:19,0:19:57.18:0,57,983	0/0:18,0:18:54.19:0,54,958	0/0:26,0:26:66.23:0,66,1169	1/1:2,29:31:75.25:1024,75,0	0/0:23,0:23:63.22:0,63,1116	0/0:21,0:21:45.15:0,45,780	0/0:39,0:39:99:0,111,1958	1/1:1,15:16:36.12:489,36,0	0/0:12,0:12:36.08:0,36,605	0/0:30,0:30:81.26:0,81,1408	0/0:17,0:17:45.15:0,45,793	1/1:1,24:25:72.24:987,72,0	0/0:15,0:15:39.13:0,39,685	1/1:3,7:10:21.07:288,21,0
chr10	87877218	.	TG	T	313.44	PASS	AB=0.750;AC=30;AF=0.833;AN=36;BaseQRankSum=-0.955;DP=51;FS=0.000;HRun=1;HaplotypeScore=22.0903;InbreedingCoeff=0.1818;MQ=84.65;MQ0=0;MQRankSum=-2.563;QD=8.25;ReadPosRankSum=-0.452;VQSLOD=0.4884;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	1/1:5,0:4:0.34:14,0,0	0/0:2,0:2:0.89:0,1,2	./.	1/1:1,0:1:3.01:41,3,0	./.	1/1:1,0:1:3:27,3,0	./.	1/1:0,3:3:8.77:53,9,0	./.	./.	./.	1/1:1,0:1:3.01:41,3,0	1/1:0,3:3:2.90:16,3,0	1/1:1,0:1:2.98:22,3,0	0/1:2,0:2:0:0,0,0	1/1:0,2:2:2.80:13,3,0	1/1:0,2:2:5.60:36,6,0	1/1:3,0:3:5.98:61,6,0	./.	1/1:1,0:1:3:25,3,0	./.	1/1:1,2:3:2.90:16,3,0	0/1:0,2:2:0:0,0,0	1/1:1,0:1:2.98:21,3,0	0/0:2,1:3:2.90:0,3,16	1/1:0,7:7:2.74:12,3,0
chr10	87877286	.	C	CTCT	1913.43	PASS	AB=0.978;AC=23;AF=0.411;AN=56;BaseQRankSum=15.049;DP=591;FS=81.246;HRun=0;HaplotypeScore=176.9999;InbreedingCoeff=-0.6380;MQ=34.71;MQ0=4;MQRankSum=-5.598;QD=3.83;ReadPosRankSum=6.131;VQSLOD=-0.2539;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:74.26:0,74,916	0/1:8,0:8:22.47:22,0,227	0/0:10,0:6:12.04:0,12,187	0/1:9,0:7:0.68:1,0,171	0/1:20,0:20:2.22:2,0,347	0/1:14,1:14:99:135,0,185	0/1:14,0:14:65.34:65,0,233	0/1:42,0:26:99:149,0,191	0/1:22,0:21:85.21:85,0,469	0/1:30,0:28:99:157,0,403	0/1:23,0:23:82.16:82,0,435	0/1:14,1:15:23.85:24,0,515	0/1:21,0:20:62.42:62,0,372	0/1:11,0:11:99:121,0,226	0/1:21,0:21:12.47:12,0,632	0/1:22,0:22:19.39:19,0,494	0/1:18,0:18:29.95:30,0,302	0/0:11,4:15:27.28:0,27,463	0/1:25,0:25:69.33:69,0,226	0/1:40,0:39:99:159,0,813	0/0:15,0:15:13.90:0,14,427	0/1:13,9:21:99:521,0,329	0/1:27,0:27:49.01:49,0,398	0/0:20,0:20:23.84:0,24,336	0/1:24,0:23:5.50:6,0,450	0/1:29,0:28:7.26:7,0,740	0/1:32,0:31:99:262,0,253	0/1:9,0:9:24.88:25,0,129
chr10	87877294	.	CCTT	C	5967.43	PASS	AB=0.777;AC=22;AF=0.393;AN=56;BaseQRankSum=15.280;DP=637;FS=74.122;HRun=0;HaplotypeScore=165.2974;InbreedingCoeff=-0.6386;MQ=37.92;MQ0=4;MQRankSum=-8.709;QD=11.48;ReadPosRankSum=6.706;VQSLOD=1.1202;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:77.26:0,77,1486	0/1:5,3:8:99:135,0,343	0/0:16,0:11:33.03:0,33,443	0/0:15,0:8:17.11:0,17,345	0/1:17,5:23:26.55:27,0,639	0/1:9,6:14:99:278,0,316	0/1:11,6:17:99:248,0,466	0/1:31,12:26:99:496,0,220	0/1:18,5:22:99:217,0,730	0/1:19,13:30:99:696,0,629	0/1:16,7:23:99:297,0,695	0/0:15,0:15:44.81:0,45,843	0/1:14,7:20:99:302,0,557	0/1:9,3:12:91.20:91,0,407	0/1:20,4:24:99:163,0,976	0/1:19,5:24:99:222,0,767	0/1:15,6:21:99:163,0,535	0/0:17,0:17:39.06:0,39,708	0/1:17,8:25:99:409,0,249	0/1:28,15:42:99:526,0,1329	0/1:15,2:17:6.20:6,0,743	0/1:22,2:23:99:158,0,646	0/1:13,15:28:99:331,0,627	0/0:17,4:21:38.74:0,39,635	0/1:17,7:23:99:156,0,615	0/1:25,6:30:99:282,0,1043	0/1:19,12:32:99:613,0,466	0/1:5,4:9:99:152,0,246
chr10	87877313	.	C	CT	1717.03	PASS	AB=0.942;AC=18;AF=0.321;AN=56;BaseQRankSum=18.515;DP=693;FS=58.964;HRun=0;HaplotypeScore=166.6408;InbreedingCoeff=-0.4696;MQ=49.49;MQ0=2;MQRankSum=-12.761;QD=3.74;ReadPosRankSum=5.276;VQSLOD=1.1858;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,3:33:55.16:55,0,896	0/1:9,0:9:0.63:1,0,204	0/0:23,0:19:44.94:0,45,600	0/0:29,0:21:20.70:0,21,544	0/1:25,0:25:38.78:39,0,646	0/1:12,6:17:99:212,0,329	0/0:17,0:17:29.16:0,29,604	0/0:34,0:23:1.60:0,2,540	0/1:26,0:26:11.93:12,0,722	0/1:32,0:30:99:106,0,370	0/1:26,1:27:98.50:99,0,518	0/0:18,0:18:38.42:0,38,626	0/1:27,0:26:69.17:69,0,532	0/1:11,1:14:75.79:76,0,338	0/0:26,0:26:43.68:0,44,806	0/1:23,0:23:21.33:21,0,604	0/0:25,0:26:42.34:0,42,832	0/0:14,0:14:42.11:0,42,566	0/1:15,1:17:90.68:91,0,369	0/1:37,0:45:99:126,0,986	0/0:22,0:22:27.49:0,27,763	0/1:24,3:26:99:178,0,441	0/1:33,0:33:99:102,0,533	0/0:25,0:25:23.27:0,23,763	0/1:22,0:22:78.99:79,0,325	0/1:25,7:32:99:286,0,620	0/1:27,3:35:99:264,0,559	0/1:10,1:11:58.18:58,0,143
chr10	87878039	.	AT	A	33.03	PASS	AB=0.827;AC=6;AF=0.107;AN=56;BaseQRankSum=-1.496;DP=489;FS=0.798;HRun=15;HaplotypeScore=119.1789;InbreedingCoeff=0.1593;MQ=72.24;MQ0=0;MQRankSum=2.618;QD=0.40;ReadPosRankSum=2.768;VQSLOD=-0.1074;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:7:5.98:18,6,0	0/0:3,0:6:15.29:0,15,72	0/0:25,0:18:3.11:0,3,59	0/0:11,0:8:2.96:0,3,20	0/0:27,3:30:24.67:0,25,368	0/0:15,0:17:32.60:0,33,175	0/0:9,0:10:22.99:0,23,138	0/1:32,4:37:59.59:60,0,274	0/0:11,0:11:24:0,24,211	0/0:16,0:16:27.83:0,28,163	0/0:19,0:22:41.63:0,42,204	0/0:12,0:11:21.07:0,21,112	0/1:10,1:11:4.20:4,0,91	0/0:17,0:17:37.46:0,37,216	0/0:20,0:21:47.80:0,48,401	0/0:17,1:18:22.72:0,23,318	0/0:8,0:14:6.93:0,7,32	0/0:8,0:10:19.84:0,20,115	0/0:23,0:25:55.34:0,55,319	0/0:10,0:13:32.33:0,32,167	0/1:4,2:6:7.27:7,0,67	0/0:15,0:15:37.73:0,38,216	0/1:13,5:19:55.14:55,0,206	0/0:9,0:12:16.84:0,17,154	0/0:15,0:17:38.81:0,39,324	0/0:29,0:28:63.57:0,64,349	0/0:32,0:38:83.58:0,84,425	0/0:15,0:16:37.83:0,38,186
chr10	87878101	.	GAAA	G	1910.82	PASS	AB=0.710;AC=16;AF=0.286;AN=56;BaseQRankSum=-2.242;DP=428;FS=2.476;HRun=15;HaplotypeScore=82.8948;InbreedingCoeff=0.6523;MQ=80.56;MQ0=3;MQRankSum=-1.901;QD=14.15;ReadPosRankSum=4.587;VQSLOD=2.1159;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:18:46.14:0,46,426	0/1:3,1:8:19.01:24,0,19	0/0:37,0:20:20.65:0,21,216	0/1:19,0:10:2.16:2,0,63	0/0:21,0:24:52.42:0,52,854	1/1:0,11:12:25.59:300,26,0	1/1:2,12:14:29.98:336,30,0	0/0:15,0:17:36.11:0,36,615	0/0:6,0:11:24.08:0,24,370	0/0:3,0:13:13.43:0,13,46	0/1:3,1:11:18.95:19,0,24	1/1:1,10:13:31.48:351,31,0	0/0:9,0:11:33.07:0,33,526	1/1:2,5:8:13.41:165,13,0	0/0:14,0:15:36.10:0,36,629	0/0:15,0:16:30.08:0,30,503	0/0:0,0:20:28.40:0,28,95	1/1:0,10:10:30.09:337,30,0	0/0:12,0:23:50.79:0,51,548	0/0:4,0:13:35.96:0,36,391	0/0:8,0:8:18.06:0,18,320	1/1:2,16:20:49.55:553,50,0	0/0:12,0:17:42.10:0,42,655	0/0:11,0:12:27.98:0,28,484	0/0:6,0:6:9.03:0,9,165	0/0:3,0:8:6.23:0,6,14	0/0:9,0:23:53.70:0,54,509	0/1:9,1:20:13.47:13,0,47
chr10	87878455	.	C	CT	2115.91	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=9.464;DP=502;FS=2.334;HRun=13;HaplotypeScore=72.5968;InbreedingCoeff=0.8654;MQ=71.04;MQ0=2;MQRankSum=0.034;QD=9.53;ReadPosRankSum=0.507;VQSLOD=3.1159;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:48.32:255,48,0	0/0:11,0:11:29.68:0,30,202	0/1:17,0:12:10.05:10,0,10	0/0:20,0:14:10.22:0,10,56	0/0:16,1:17:7.80:0,8,198	1/1:20,0:20:48.73:252,49,0	1/1:14,0:14:25.81:130,26,0	0/0:26,0:30:49.39:0,49,327	0/0:14,0:15:40.68:0,41,273	0/0:18,2:21:18.68:0,19,261	0/0:19,0:21:45.47:0,45,299	1/1:7,0:7:11.47:58,11,0	0/0:19,0:19:41.54:0,42,286	1/1:8,0:8:8.63:44,9,0	0/0:21,0:21:46.76:0,47,312	0/0:20,0:21:43.61:0,44,292	0/0:16,0:18:43.63:0,44,292	1/1:12,0:12:19.96:99,20,0	1/1:9,18:27:39.93:465,40,0	1/1:8,14:23:14.33:246,14,0	0/0:10,0:11:16.84:0,17,109	1/1:9,0:9:18.12:108,18,0	0/0:24,0:25:52.47:0,52,355	0/0:14,2:16:13.76:0,14,237	0/0:11,0:12:25.81:0,26,170	1/1:22,0:22:0.77:118,1,0	1/1:5,18:24:24.41:356,24,0	1/1:21,0:21:43.62:192,44,0
chr10	87878468	.	T	TTA	3469.71	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=3.555;DP=517;FS=9.593;HRun=0;HaplotypeScore=75.7311;InbreedingCoeff=0.9009;MQ=71.91;MQ0=3;MQRankSum=0.549;QD=20.17;ReadPosRankSum=2.380;VQSLOD=3.6027;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:22:49.39:285,49,0	0/0:11,0:11:33.01:0,33,390	0/0:21,0:14:17.41:0,17,193	0/1:27,0:18:20.02:20,0,118	0/0:18,0:18:49.90:0,50,552	1/1:1,17:22:54.06:836,54,0	1/1:1,14:17:27.09:450,27,0	0/0:24,0:24:66:0,66,738	0/0:16,0:16:35.14:0,35,538	0/0:22,0:22:64.34:0,64,677	0/0:24,0:25:71.88:0,72,757	1/1:0,4:6:11.96:172,12,0	0/0:16,0:16:42.01:0,42,522	1/1:0,8:8:9.03:155,9,0	0/0:21,0:21:59.24:0,59,643	0/0:18,0:18:51.04:0,51,598	0/0:20,0:20:57.04:0,57,638	1/1:1,13:15:21.07:347,21,0	0/0:25,0:25:16.03:0,16,261	0/0:20,0:20:16.22:0,16,285	0/0:11,0:11:32.94:0,33,330	1/1:0,10:13:38.78:453,39,0	0/0:25,0:25:68.64:0,69,783	0/0:17,0:17:47.54:0,48,539	0/0:11,0:11:33.01:0,33,379	1/1:2,2:25:31.35:475,31,0	0/0:24,0:24:30.34:0,30,220	1/1:0,0:17:46.79:278,47,0
chr10	87878641	.	CT	C	2172.60	PASS	AB=0.777;AC=25;AF=0.446;AN=56;BaseQRankSum=4.753;DP=490;FS=25.401;HRun=12;HaplotypeScore=58.3743;InbreedingCoeff=0.7651;MQ=69.09;MQ0=6;MQRankSum=1.171;QD=10.60;ReadPosRankSum=2.127;VQSLOD=1.0121;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,4:52:8.49:0,8,756	0/1:1,4:6:13.46:82,0,13	0/0:15,0:14:14.96:0,15,129	0/0:13,0:10:6.16:0,6,47	0/0:16,0:16:33.02:0,33,317	1/1:1,9:10:20.92:163,21,0	1/1:4,11:17:9.53:237,10,0	0/0:26,1:27:26.93:0,27,477	0/0:17,1:18:15.82:0,16,325	1/1:15,9:23:18.71:214,19,0	1/1:4,12:16:32.85:255,33,0	1/1:4,7:11:17.89:139,18,0	0/0:12,0:13:29.94:0,30,269	1/1:1,6:6:11.95:93,12,0	0/0:15,1:15:9.86:0,10,275	0/0:14,0:14:42.06:0,42,413	1/1:10,22:32:18.51:461,19,0	1/1:6,15:21:38.81:302,39,0	0/0:17,1:26:17.21:0,17,207	0/0:3,0:17:39.94:0,40,216	0/0:20,0:20:34.41:0,34,410	1/1:3,5:8:11.87:86,12,0	0/1:9,1:10:4.74:5,0,128	0/1:17,2:21:2.39:2,0,360	0/0:8,0:8:21.04:0,21,213	1/1:4,7:10:20.89:160,21,0	0/0:11,1:28:8.64:0,9,149	1/1:0,10:10:23.91:186,24,0
chr10	87878915	.	AGT	A	269.21	PASS	AB=0.950;AC=17;AF=0.386;AN=44;BaseQRankSum=4.433;DP=554;FS=0.000;HRun=0;HaplotypeScore=76.6359;InbreedingCoeff=0.5438;MQ=68.32;MQ0=8;MQRankSum=-2.416;QD=1.27;ReadPosRankSum=1.917;VQSLOD=0.8636;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,1:35:3:32,3,0	./.	./.	./.	0/0:20,0:20:9.03:0,9,129	0/0:15,0:14:11.95:0,12,94	0/0:30,0:29:21.01:0,21,205	./.	0/1:14,2:16:14.05:14,0,143	1/1:25,0:25:3.86:23,4,0	1/1:12,0:17:8.65:39,9,0	0/0:10,0:10:14.99:0,15,154	./.	0/0:13,0:13:2.87:0,3,26	0/1:23,1:24:23.08:23,0,39	0/0:15,0:15:15.03:0,15,199	1/1:19,0:25:14.16:69,14,0	0/0:17,0:17:8.96:0,9,69	0/0:14,0:14:15.03:0,15,177	0/0:13,0:16:12.03:0,12,155	0/0:35,0:35:18.03:0,18,224	0/1:9,0:9:0:0,0,0	./.	1/1:33,6:38:18.03:192,18,0	0/0:16,0:15:8.97:0,9,128	1/1:19,0:20:2.84:14,3,0	0/0:19,0:25:17.93:0,18,138	1/1:1,0:2:2.84:14,3,0
chr10	87878924	.	G	GTGTG	668.02	PASS	AB=1.000;AC=15;AF=0.326;AN=46;BaseQRankSum=-4.164;DP=572;FS=11.048;HRun=0;HaplotypeScore=100.4200;InbreedingCoeff=0.4032;MQ=58.75;MQ0=11;MQRankSum=2.432;QD=4.15;ReadPosRankSum=-0.167;VQSLOD=0.9858;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:2.99:0,3,23	./.	./.	./.	0/0:21,0:21:3:0,3,45	1/1:15,0:14:12.03:199,12,0	1/1:29,0:28:18.05:248,18,0	./.	0/0:20,0:20:9.01:0,9,118	0/0:27,0:27:0.16:0,0,6	0/0:17,0:17:6.44:0,6,57	1/1:10,0:10:11.54:157,12,0	0/1:19,0:19:0:0,0,0	1/1:11,0:10:1.51:40,2,0	0/0:21,0:21:3:0,3,28	0/0:18,0:18:9.02:0,9,135	0/0:32,0:32:18.32:0,18,138	1/1:13,6:21:6:90,6,0	0/1:17,0:17:22.14:22,0,39	0/1:13,0:13:6.47:6,0,14	0/0:37,0:37:6.01:0,6,92	0/0:9,0:9:0:0,0,0	./.	0/0:45,0:44:17.76:0,18,167	0/0:16,0:15:0.46:0,0,1	0/0:17,0:16:3:0,3,28	1/1:26,0:26:3.01:41,3,0	0/0:2,0:2:3:0,3,28
chr10	87879236	.	GA	G	2314.56	PASS	AB=0.801;AC=30;AF=0.536;AN=56;BaseQRankSum=4.070;DP=578;FS=0.403;HRun=14;HaplotypeScore=65.2746;InbreedingCoeff=0.2600;MQ=68.82;MQ0=3;MQRankSum=0.617;QD=5.66;ReadPosRankSum=3.494;VQSLOD=2.2830;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,31:37:39.62:410,40,0	0/1:6,5:11:11.38:50,0,11	0/1:21,0:10:8.42:8,0,59	0/1:18,0:13:12.04:12,0,34	0/0:23,0:23:42.74:0,43,367	1/1:8,11:21:7.99:175,8,0	1/1:5,17:22:8:198,8,0	0/1:23,3:26:14.25:14,0,240	0/0:14,0:16:32.86:0,33,289	1/1:8,13:21:7.73:198,8,0	0/1:7,8:15:10.10:84,0,10	0/1:4,13:16:2.91:120,0,3	0/1:15,4:20:2.30:2,0,241	1/1:5,10:17:16.83:109,17,0	0/0:18,2:19:7.53:0,8,324	0/0:17,0:17:44.94:0,45,402	1/1:7,27:34:62.12:431,62,0	1/1:4,7:13:12.96:73,13,0	0/0:20,3:23:6.63:0,7,311	0/0:17,1:21:21.01:0,21,302	0/1:8,6:14:37.72:38,0,112	1/1:9,6:15:14.81:102,15,0	0/1:9,1:11:17.15:17,0,123	0/0:30,1:31:51.42:0,51,615	0/0:15,3:17:0.39:0,0,138	1/1:13,22:39:10.06:299,10,0	0/1:18,5:23:16.71:17,0,269	1/1:4,9:13:20.77:144,21,0
chr10	87879893	.	CT	C	1787.64	PASS	AB=0.917;AC=32;AF=0.571;AN=56;BaseQRankSum=4.746;DP=504;FS=4.148;HRun=15;HaplotypeScore=75.3127;InbreedingCoeff=0.7983;MQ=65.27;MQ0=21;MQRankSum=1.375;QD=6.52;ReadPosRankSum=2.970;VQSLOD=3.0218;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:40:76.22:0,76,452	1/1:2,0:11:17.89:52,18,0	0/0:21,0:14:6.19:0,6,69	0/0:23,0:7:1.55:0,2,4	0/0:16,0:15:6.29:0,6,156	1/1:6,6:14:22.03:142,22,0	1/1:8,12:21:22.02:137,22,0	0/0:23,0:23:33.51:0,34,270	0/0:20,0:18:31.87:0,32,245	1/1:7,0:24:22.18:74,22,0	1/1:2,0:6:8.30:27,8,0	1/1:10,4:14:20.03:179,20,0	0/0:9,0:9:10.41:0,10,81	1/1:6,10:15:23.54:148,24,0	0/1:9,0:8:2.18:2,0,78	0/0:10,0:10:18.87:0,19,156	1/1:5,0:14:16.06:47,16,0	1/1:18,15:34:58.07:359,58,0	1/1:14,7:19:28.83:183,29,0	1/1:11,7:18:18.74:115,19,0	0/0:21,1:23:8.81:0,9,182	1/1:4,8:11:23.45:147,23,0	0/1:8,2:10:0.99:1,0,96	0/0:16,1:18:16.57:0,17,259	0/0:17,1:19:16.57:0,17,257	1/1:10,6:15:36.91:228,37,0	1/1:8,15:25:11.10:146,11,0	1/1:2,0:2:1.99:6,2,0
chr10	87880149	.	TGAGGGATACCTAGGG	T	15525.94	PASS	AB=0.743;AC=18;AF=0.321;AN=56;BaseQRankSum=16.605;DP=599;FS=13.016;HRun=0;HaplotypeScore=258.7222;InbreedingCoeff=0.8032;MQ=80.72;MQ0=1;MQRankSum=-16.461;QD=79.21;ReadPosRankSum=3.126;VQSLOD=3.2906;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,18:25:39.05:1480,39,0	0/0:7,0:7:15.05:0,15,845	0/0:13,0:13:39.13:0,39,2369	0/0:25,0:25:75.04:0,75,3997	0/0:16,0:16:48.15:0,48,3096	1/1:4,11:15:30.10:1323,30,0	1/1:9,21:28:57.15:2401,57,0	0/0:26,0:26:72.24:0,72,4829	0/0:23,0:22:63.20:0,63,4368	0/0:23,0:23:66.23:0,66,4896	0/0:11,0:11:33.11:0,33,2040	1/1:3,21:24:60.16:2534,60,0	0/1:15,1:15:92.82:93,0,2823	1/1:5,22:27:63.22:2834,63,0	0/0:23,0:23:60.21:0,60,4388	0/0:15,0:15:45.14:0,45,3173	0/0:38,0:38:99:0,111,7274	1/1:6,10:16:18.02:695,18,0	0/0:15,0:15:45.13:0,45,2902	0/0:13,0:13:39.13:0,39,2751	0/0:74,0:74:99:0,223,15023	1/1:2,14:16:42.10:1568,42,0	0/0:12,0:12:36.11:0,36,2423	0/0:24,0:24:69.24:0,69,4785	0/0:14,0:14:42.14:0,42,3095	0/1:4,20:24:99:2463,0,165	0/0:31,0:31:93.30:0,93,6074	1/1:1,2:3:3.01:135,3,0
chr10	87881010	.	GA	G	6275.26	PASS	AB=0.767;AC=32;AF=0.571;AN=56;BaseQRankSum=9.707;DP=535;FS=0.743;HRun=10;HaplotypeScore=61.3614;InbreedingCoeff=0.8311;MQ=71.64;MQ0=4;MQRankSum=-0.748;QD=18.84;ReadPosRankSum=3.607;VQSLOD=5.5639;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,36:39:98.96:859,99,0	0/1:1,2:3:24.18:43,0,24	0/0:23,1:18:21.38:0,21,371	0/0:17,0:12:21.95:0,22,188	0/0:25,0:25:65.15:0,65,721	1/1:1,8:9:21:182,21,0	1/1:1,8:9:15:130,15,0	0/0:27,0:26:74.01:0,74,801	0/1:13,1:14:1.99:2,0,208	1/1:4,27:31:79.53:680,80,0	1/1:3,22:25:56.97:493,57,0	1/1:2,13:15:32.99:287,33,0	0/0:13,0:13:27.07:0,27,299	1/1:1,11:12:26.99:234,27,0	0/0:9,1:10:1.02:0,1,238	0/0:15,0:15:41.95:0,42,445	1/1:4,35:39:95.98:833,96,0	1/1:5,18:23:25.57:345,26,0	1/1:3,12:15:5.80:276,6,0	1/1:4,12:16:35.98:312,36,0	0/0:11,0:12:35.91:0,36,369	1/1:2,19:21:50.98:441,51,0	0/0:22,0:22:54.13:0,54,589	0/0:21,0:21:57.15:0,57,630	0/0:16,0:15:39.08:0,39,420	1/1:2,22:24:65.66:558,66,0	1/1:0,12:12:29.99:260,30,0	1/1:7,19:26:38.81:338,39,0
chr10	87882779	.	G	GT	2189.57	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=10.952;DP=652;FS=0.000;HRun=9;HaplotypeScore=101.4218;InbreedingCoeff=0.8477;MQ=66.35;MQ0=2;MQRankSum=-1.428;QD=8.26;ReadPosRankSum=-2.911;VQSLOD=1.5702;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:33:25.58:200,26,0	1/1:16,0:16:2.02:8,2,0	0/0:22,0:20:33.09:0,33,255	0/0:15,0:14:13.21:0,13,164	0/0:38,2:40:47.63:0,48,855	1/1:9,11:21:15.13:261,15,0	1/1:10,11:21:26.43:345,26,0	0/0:29,0:29:14.09:0,14,460	0/0:43,0:43:99:0,105,895	1/1:26,1:27:17.68:111,18,0	0/1:17,0:17:1.07:31,0,1	1/1:7,11:18:20.66:206,21,0	0/0:22,0:22:59.95:0,60,515	1/1:19,5:24:22.29:342,22,0	0/0:27,0:27:74.95:0,75,643	0/0:30,0:30:80.98:0,81,703	1/1:19,1:19:2.01:32,2,0	1/1:4,12:16:29.98:313,30,0	0/0:26,0:25:33.21:0,33,156	0/0:21,0:21:7.53:0,8,147	0/0:18,0:18:50.96:0,51,439	1/1:16,6:22:3.53:264,4,0	0/0:27,0:27:71.98:0,72,625	0/0:15,0:14:38.76:0,39,338	0/0:31,0:31:86.95:0,87,747	1/1:3,0:21:43.55:213,44,0	0/0:20,1:21:8.41:0,8,164	1/1:0,3:8:11.53:76,12,0
chr10	87882788	.	TGTTG	T	3593.59	PASS	AB=0.918;AC=16;AF=0.286;AN=56;BaseQRankSum=5.131;DP=655;FS=12.925;HRun=0;HaplotypeScore=133.1883;InbreedingCoeff=0.2693;MQ=61.71;MQ0=2;MQRankSum=0.867;QD=14.61;ReadPosRankSum=-7.345;VQSLOD=0.1678;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:29:63.62:64,0,348	1/1:0,14:14:17.75:310,18,0	0/0:26,0:19:50.52:0,51,909	0/0:17,0:15:24.88:0,25,566	0/0:41,0:41:99:0,111,2571	0/1:17,0:19:5.85:6,0,273	0/1:15,0:19:83.44:83,0,264	0/0:27,0:28:23.29:0,23,1296	0/0:40,0:40:99:0,114,2522	1/1:2,27:29:83.57:1358,84,0	1/1:2,15:17:40.48:719,40,0	0/1:14,0:15:29.39:29,0,88	0/0:22,0:22:66.20:0,66,1565	0/1:20,0:21:99:222,0,148	0/0:25,0:25:75.22:0,75,1620	0/0:31,0:31:93.30:0,93,2129	1/1:2,18:19:29.46:565,29,0	0/1:14,0:16:29.72:30,0,172	0/0:23,0:26:0.89:0,1,300	0/0:17,0:20:19.13:0,19,412	0/0:20,0:20:57.15:0,57,1289	0/1:22,0:25:80.32:80,0,306	0/0:27,0:27:81.26:0,81,1781	0/0:17,0:16:51.17:0,51,1211	0/0:36,0:36:99:0,108,2414	0/1:21,0:21:99:127,0,600	0/0:25,0:25:7.40:0,7,443	0/0:8,0:8:12.04:0,12,208
chr10	87882791	.	TG	T	872.61	PASS	AB=0.956;AC=14;AF=0.250;AN=56;BaseQRankSum=10.562;DP=654;FS=2.618;HRun=1;HaplotypeScore=104.1422;InbreedingCoeff=0.3833;MQ=63.00;MQ0=2;MQRankSum=-2.744;QD=4.18;ReadPosRankSum=-2.795;VQSLOD=-0.6998;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:30:49.18:49,0,249	1/1:14,0:14:12.72:66,13,0	0/0:31,0:24:63.32:0,63,903	0/0:19,0:16:17.56:0,18,458	0/0:41,0:41:99:0,121,1809	0/0:18,1:19:10.52:0,11,333	0/1:17,2:19:80.52:81,0,247	0/0:26,0:26:72.21:0,72,1039	0/0:40,0:40:99:0,115,1748	1/1:29,0:29:24.12:320,24,0	1/1:17,0:17:20.51:153,21,0	0/1:14,1:15:17.18:17,0,124	0/0:21,0:21:63.20:0,63,976	0/1:20,0:20:99:165,0,179	0/0:24,0:24:72.23:0,72,1092	0/0:32,0:32:96.29:0,96,1462	1/1:20,0:19:0.64:114,1,0	0/1:15,2:17:0.72:1,0,200	0/0:23,0:23:48.60:0,49,447	0/0:21,0:21:53.45:0,53,518	0/0:18,0:18:54.18:0,54,846	0/1:27,0:27:73.47:73,0,505	0/0:28,0:28:84.25:0,84,1260	0/0:17,0:16:51.17:0,51,802	0/0:33,0:33:99:0,99,1540	0/0:20,0:20:37.68:0,38,584	0/0:24,0:24:64.21:0,64,628	0/0:8,0:8:12.04:0,12,187
chr10	87883445	.	C	CT	2126.27	PASS	AB=0.822;AC=20;AF=0.357;AN=56;BaseQRankSum=-8.718;DP=589;FS=8.903;HRun=13;HaplotypeScore=70.9531;InbreedingCoeff=0.3523;MQ=71.45;MQ0=1;MQRankSum=1.860;QD=7.33;ReadPosRankSum=-0.389;VQSLOD=1.8803;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,25:40:11.60:382,12,0	0/0:11,0:12:19.80:0,20,129	0/0:14,0:9:16.39:0,16,97	0/0:18,0:18:12.06:0,12,149	0/0:23,0:26:32.49:0,32,201	0/1:11,18:29:2.12:268,0,2	0/1:8,9:18:14.97:191,0,15	0/0:33,0:36:65.46:0,65,428	0/0:16,3:19:1.73:0,2,155	0/0:21,1:23:14.85:0,15,230	0/0:14,0:16:36.77:0,37,238	1/1:4,13:17:0.92:293,1,0	0/0:17,0:17:20.62:0,21,144	0/1:4,13:19:12.13:203,0,12	0/0:14,0:14:17.74:0,18,123	0/1:11,1:12:1.13:1,0,138	0/0:24,0:27:38.70:0,39,244	1/1:7,21:32:25.58:414,26,0	0/1:22,2:25:7.04:7,0,230	0/0:19,1:24:22.89:0,23,278	0/1:19,1:23:10.85:11,0,164	1/1:3,13:17:14.18:161,14,0	0/1:10,0:11:6.27:6,0,71	0/1:16,2:19:12.05:12,0,207	0/0:18,1:23:16.91:0,17,236	1/1:7,13:22:13.50:302,14,0	0/0:26,0:26:24.11:0,24,277	1/1:0,2:3:2.07:50,2,0
chr10	87883770	.	GT	G	159.22	PASS	AB=0.942;AC=9;AF=0.161;AN=56;BaseQRankSum=6.296;DP=730;FS=247.978;HRun=2;HaplotypeScore=195.7087;InbreedingCoeff=-0.2025;MQ=79.16;MQ0=0;MQRankSum=14.363;QD=0.75;ReadPosRankSum=3.251;VQSLOD=-0.7535;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:28.75:0,29,698	0/1:7,0:7:4.68:5,0,103	0/1:16,13:29:90.42:90,0,355	0/1:18,7:26:24.50:24,0,245	0/0:29,0:29:51.43:0,51,402	0/0:27,0:27:38.86:0,39,568	0/0:37,0:37:53.64:0,54,794	0/0:32,0:32:1.82:0,2,472	0/0:24,0:24:34.91:0,35,309	0/1:24,0:23:57.77:58,0,289	0/1:20,0:20:27.41:27,0,122	0/0:34,0:34:63.76:0,64,754	0/0:17,0:17:19.88:0,20,184	0/0:22,0:22:28.48:0,28,392	0/0:31,0:31:46.99:0,47,442	0/0:25,0:25:50.09:0,50,420	0/0:33,0:33:27.62:0,28,768	0/0:25,0:25:3.36:0,3,363	0/0:26,0:26:4.07:0,4,349	0/0:21,0:21:19.83:0,20,289	0/0:45,0:45:54.91:0,55,896	0/1:31,0:31:45.58:46,0,366	0/0:16,0:16:10.77:0,11,159	0/1:20,0:20:2.50:2,0,272	0/1:24,0:24:25.94:26,0,392	0/1:30,0:30:10.63:11,0,424	0/0:21,0:21:47.89:0,48,320	0/0:10,0:10:14.56:0,15,181
chr10	87883832	.	C	CTG	2169.69	PASS	AB=0.771;AC=9;AF=0.161;AN=56;BaseQRankSum=9.277;DP=701;FS=81.578;HRun=0;HaplotypeScore=152.4330;InbreedingCoeff=-0.1968;MQ=69.28;MQ0=0;MQRankSum=-7.961;QD=11.67;ReadPosRankSum=-0.456;VQSLOD=0.3946;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,14:47:78.25:0,78,1247	0/0:4,7:11:12.04:0,12,196	0/1:15,2:17:99:114,0,430	0/1:17,1:18:47.56:48,0,497	0/0:12,7:19:29.69:0,30,489	0/0:12,11:23:33.11:0,33,538	0/0:28,9:37:81.28:0,81,1311	0/1:13,6:19:99:310,0,530	0/0:19,11:30:48.12:0,48,754	0/1:9,9:18:99:492,0,386	0/0:5,9:14:14.73:0,15,238	0/0:24,8:32:60.12:0,60,920	0/0:14,9:23:42.14:0,42,685	0/0:16,5:21:47.76:0,48,775	0/0:12,18:30:33.09:0,33,538	0/1:11,6:17:27.31:27,0,427	0/0:49,6:55:99:0,130,2293	0/1:21,7:28:99:280,0,946	0/1:14,6:20:99:299,0,536	0/0:8,9:17:23.27:0,23,380	0/0:63,7:70:99:0,149,2317	0/0:17,12:29:41.82:0,42,678	0/0:12,5:17:33.03:0,33,498	0/0:14,4:18:42.14:0,42,686	0/0:12,7:19:32.60:0,33,537	0/1:11,12:23:99:662,0,371	0/1:15,11:26:79.87:80,0,610	0/0:3,0:3:9.03:0,9,139
chr10	87884053	.	G	GA	944.35	PASS	AB=0.941;AC=8;AF=0.143;AN=56;BaseQRankSum=8.021;DP=377;FS=0.000;HRun=9;HaplotypeScore=42.0179;InbreedingCoeff=0.6301;MQ=75.33;MQ0=0;MQRankSum=0.873;QD=12.11;ReadPosRankSum=-0.334;VQSLOD=2.0962;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:77.91:0,78,664	0/0:5,0:5:12:0,12,104	0/0:18,0:16:5.30:0,5,69	0/0:7,0:5:5.99:0,6,52	0/0:12,0:12:32.99:0,33,286	0/0:12,0:12:29.99:0,30,260	0/0:16,0:16:47.99:0,48,417	0/1:16,1:17:7.16:7,0,340	0/0:14,0:14:20.97:0,21,182	0/0:15,0:16:44.01:0,44,366	0/0:3,0:3:2.99:0,3,26	0/0:15,0:15:41.99:0,42,365	0/0:8,0:8:23.99:0,24,208	0/0:10,0:10:17.98:0,18,156	0/0:19,0:19:44.99:0,45,391	0/0:15,0:15:35.96:0,36,309	0/0:12,0:12:29.99:0,30,260	0/0:14,0:14:35.98:0,36,313	1/1:8,14:22:21.97:437,22,0	1/1:1,11:12:7.05:306,7,0	0/0:22,0:22:59.98:0,60,521	0/0:3,0:3:9:0,9,78	0/0:3,0:3:9:0,9,78	0/0:18,0:18:44.99:0,45,391	0/1:14,1:15:0.19:0,0,227	0/0:17,0:17:38.96:0,39,335	1/1:0,12:12:30.08:332,30,0	0/0:8,0:8:20.99:0,21,182
chr10	87884834	.	C	CTCTCTA	11485.99	PASS	AB=0.958;AC=40;AF=0.714;AN=56;BaseQRankSum=-3.304;DP=575;FS=0.417;HRun=0;HaplotypeScore=157.3948;InbreedingCoeff=0.0962;MQ=67.49;MQ0=7;MQRankSum=-9.094;QD=23.16;ReadPosRankSum=-1.251;VQSLOD=4.3754;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,1:24:15.46:244,0,15	1/1:2,1:16:27.09:656,27,0	0/0:27,0:17:11.78:0,12,202	0/0:35,0:16:9.44:0,9,147	0/1:19,0:19:94.88:95,0,367	1/1:3,22:28:42.01:1356,42,0	1/1:3,24:28:42.14:1314,42,0	0/1:28,0:27:99:334,0,183	0/1:18,0:18:81.83:82,0,333	1/1:9,5:30:67.33:1144,67,0	1/1:15,0:15:11.85:250,12,0	1/1:1,13:14:15.05:530,15,0	0/1:18,0:18:99:115,0,344	1/1:3,11:17:24.08:773,24,0	0/1:18,0:18:25.88:26,0,427	0/0:17,0:16:21.15:0,21,509	1/1:3,2:23:24.01:580,24,0	1/1:2,15:18:21.07:744,21,0	1/1:22,0:18:43.78:465,44,0	1/1:20,0:20:14.42:206,14,0	0/1:16,0:16:21.84:22,0,371	1/1:1,15:16:14.92:524,15,0	0/1:17,0:17:63.34:63,0,333	0/1:14,0:12:79.50:80,0,163	0/1:22,0:22:85.83:86,0,399	1/1:2,16:20:50.50:879,50,0	1/1:10,0:24:24.04:498,24,0	1/1:5,2:7:18:420,18,0
chr10	87884876	.	CTGTGTGTG	C	1365.47	PASS	AB=0.937;AC=18;AF=0.375;AN=48;BaseQRankSum=4.661;DP=475;FS=0.861;HRun=0;HaplotypeScore=123.7883;InbreedingCoeff=0.4034;MQ=59.46;MQ0=28;MQRankSum=-5.380;QD=8.48;ReadPosRankSum=2.399;VQSLOD=2.4133;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:6:3:0,3,26	./.	./.	0/0:19,0:17:21.07:0,21,626	1/1:15,3:17:18.05:346,18,0	1/1:10,2:11:2.97:20,3,0	0/0:30,0:28:3.01:0,3,48	0/0:11,0:10:6.02:0,6,245	0/0:16,0:16:7.53:0,8,129	0/1:11,0:11:49.72:50,0,74	1/1:8,2:10:8.99:168,9,0	0/0:17,0:16:24.08:0,24,649	1/1:16,1:16:11.65:275,12,0	0/0:13,0:13:21.07:0,21,636	0/0:14,0:13:27.09:0,27,600	0/0:22,0:22:5.93:0,6,205	1/1:18,1:17:1.22:71,1,0	./.	1/1:10,0:10:5.89:96,6,0	0/0:23,0:21:31.92:0,32,798	0/1:15,1:17:77.90:117,0,78	0/0:11,0:11:6.02:0,6,218	0/0:20,0:19:24.08:0,24,866	0/0:17,0:17:15.02:0,15,308	0/1:19,0:19:20.80:21,0,32	0/1:14,2:16:46.44:143,0,46	1/1:5,5:9:9.03:222,9,0
chr10	87885348	.	AGACCG	A	8432.76	PASS	AB=0.531;AC=15;AF=0.268;AN=56;BaseQRankSum=14.368;DP=606;FS=8.883;HRun=0;HaplotypeScore=119.2639;InbreedingCoeff=0.9082;MQ=80.51;MQ0=1;MQRankSum=-7.171;QD=52.70;ReadPosRankSum=4.500;VQSLOD=5.1022;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:99:0,108,3358	0/0:10,0:10:30.10:0,30,921	0/0:31,0:31:87.29:0,87,2554	0/0:22,0:22:63.20:0,63,1828	0/0:11,0:11:30.10:0,30,909	1/1:1,18:18:48.16:1070,48,0	1/1:3,21:24:45.15:1001,45,0	0/0:32,0:32:93.32:0,93,2879	0/0:17,0:17:45.15:0,45,1447	0/0:22,0:22:66.23:0,66,2058	0/0:18,0:18:51.18:0,51,1579	1/1:0,23:23:57.20:1270,57,0	0/0:15,0:15:45.15:0,45,1443	1/1:0,22:22:57.20:1269,57,0	0/0:26,0:26:78.27:0,78,2466	0/0:25,0:25:75.26:0,75,2417	0/0:27,0:27:78.27:0,78,2406	1/1:2,16:18:42.14:936,42,0	0/0:25,0:25:72.25:0,72,2231	0/0:12,0:12:30.09:0,30,897	0/0:51,0:51:99:0,151,4652	1/1:1,19:20:42.14:932,42,0	0/0:12,0:12:33.11:0,33,1060	0/0:23,0:23:69.24:0,69,2197	0/0:10,0:10:30.10:0,30,841	0/1:3,23:26:99:1419,0,119	0/0:21,0:21:63.22:0,63,2034	1/1:0,8:8:24.08:535,24,0
chr10	87887532	.	G	GGT	2526.53	PASS	AB=0.762;AC=9;AF=0.161;AN=56;BaseQRankSum=-7.144;DP=545;FS=0.000;HRun=0;HaplotypeScore=76.5937;InbreedingCoeff=0.5517;MQ=70.97;MQ0=1;MQRankSum=-0.080;QD=20.71;ReadPosRankSum=1.195;VQSLOD=3.5614;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,25:35:60.20:965,60,0	1/1:1,3:5:6.02:97,6,0	0/0:27,0:14:1.60:0,2,50	0/1:21,0:16:5.63:6,0,153	0/0:15,0:15:27.04:0,27,292	0/0:20,0:23:56.83:0,57,636	0/0:23,0:26:59.68:0,60,660	0/0:15,0:15:27.08:0,27,327	0/0:20,0:20:45.11:0,45,522	0/1:5,5:10:15.33:269,0,15	0/1:5,8:13:59.35:263,0,59	0/0:15,0:15:33.10:0,33,400	0/0:13,0:14:26.90:0,27,294	0/0:22,0:22:36.11:0,36,437	0/0:14,0:14:33.09:0,33,390	0/0:12,0:12:27.08:0,27,327	1/1:8,25:38:35.86:1076,36,0	0/0:25,0:27:59.88:0,60,683	0/0:11,0:11:18.06:0,18,218	0/0:10,0:10:21.03:0,21,222	0/0:48,0:52:99:0,120,1338	0/0:12,0:12:27.08:0,27,327	0/0:14,0:14:36.09:0,36,412	0/0:32,0:32:75.20:0,75,884	0/0:18,0:18:42.12:0,42,499	0/0:12,0:12:30.09:0,30,364	0/0:21,0:21:48.13:0,48,571	0/0:11,0:11:24.07:0,24,291
chr10	87891000	.	TA	T	988.88	PASS	AB=0.899;AC=9;AF=0.161;AN=56;BaseQRankSum=6.872;DP=580;FS=2.478;HRun=10;HaplotypeScore=63.9198;InbreedingCoeff=0.6320;MQ=67.71;MQ0=2;MQRankSum=1.881;QD=10.19;ReadPosRankSum=0.179;VQSLOD=2.5963;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:40:82.90:0,83,419	0/1:10,1:11:1.98:2,0,208	0/0:25,1:22:36.45:0,36,368	0/0:18,0:14:19.69:0,20,178	0/0:26,0:26:72.17:0,72,784	0/1:12,2:14:9.91:10,0,356	0/0:26,0:26:48.97:0,49,650	0/0:32,0:31:81.21:0,81,891	0/0:14,0:14:36.08:0,36,390	0/0:22,0:22:56.25:0,56,615	0/0:14,0:14:36.04:0,36,358	0/0:14,0:14:33.08:0,33,358	0/0:15,0:15:33.09:0,33,365	0/0:14,0:14:36.10:0,36,397	0/0:23,0:23:57.15:0,57,631	0/0:26,0:26:57.15:0,57,629	0/0:34,1:35:61.16:0,61,887	0/0:21,3:23:19.02:0,19,416	1/1:4,13:17:38.98:338,39,0	1/1:0,20:20:59.81:497,60,0	0/0:21,1:21:24.99:0,25,469	0/0:16,0:16:42.10:0,42,456	0/1:17,2:19:3.99:4,0,408	0/0:22,0:22:57.14:0,57,623	0/0:19,0:19:36.10:0,36,398	0/0:24,1:25:42.78:0,43,606	1/1:3,13:15:32.98:286,33,0	0/0:8,1:9:1.01:0,1,230
chr10	87892544	.	TACACAC	T	2281.24	PASS	AB=0.656;AC=29;AF=0.558;AN=52;BaseQRankSum=5.131;DP=331;FS=0.745;HRun=0;HaplotypeScore=77.5610;InbreedingCoeff=0.6786;MQ=64.31;MQ0=10;MQRankSum=-6.595;QD=15.31;ReadPosRankSum=0.818;VQSLOD=2.7446;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:22:8.34:0,8,253	1/1:2,0:3:3.01:42,3,0	./.	./.	0/0:10,0:11:21.07:0,21,609	1/1:10,6:16:15.01:222,15,0	1/1:10,0:10:2.99:25,3,0	0/0:27,0:27:15:0,15,252	0/0:4,0:4:3.01:0,3,97	1/1:6,0:7:3.01:42,3,0	1/1:8,0:13:6.02:84,6,0	1/1:1,2:4:6.49:104,6,0	0/0:11,0:11:15.05:0,15,426	1/1:2,1:4:3.90:53,4,0	0/0:7,0:7:14.92:0,15,403	0/0:4,0:4:6.02:0,6,188	0/1:10,0:21:35.59:219,0,36	1/1:8,3:11:12.04:208,12,0	1/1:4,5:8:15.02:248,15,0	1/1:5,2:8:9.02:142,9,0	0/0:29,0:28:33.11:0,33,940	1/1:0,3:3:5.99:77,6,0	0/0:7,0:7:6.02:0,6,194	0/0:17,0:18:30.10:0,30,874	0/0:7,0:8:15.05:0,15,400	1/1:2,11:13:29.85:484,30,0	1/1:10,4:15:15.01:237,15,0	1/1:4,6:10:15.52:285,16,0
chr10	87893878	.	CTCA	C	787.68	PASS	AC=22;AF=0.917;AN=24;BaseQRankSum=0.919;DP=91;FS=12.041;HRun=0;HaplotypeScore=14.0743;InbreedingCoeff=0.1133;MQ=16.06;MQ0=48;MQRankSum=1.327;QD=19.21;ReadPosRankSum=-0.306;VQSLOD=1.0300;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:3:6.02:110,6,0	./.	./.	0/0:8,0:1:3.01:0,3,65	./.	1/1:0,2:2:6.02:110,6,0	./.	./.	1/1:0,3:1:3.01:52,3,0	1/1:2,1:2:6.02:107,6,0	1/1:1,2:1:3.01:55,3,0	1/1:0,1:1:3.01:55,3,0	./.	./.	./.	./.	1/1:0,1:1:3.01:55,3,0	./.	1/1:5,6:2:6.02:107,6,0	./.	./.	./.	./.	./.	./.	1/1:1,3:3:6.02:111,6,0	1/1:0,4:2:3.01:55,3,0	1/1:2,1:1:3.01:55,3,0
chr10	87894025	.	T	TTA	380.70	PASS	AC=10;AF=0.714;AN=14;BaseQRankSum=-1.557;DP=96;FS=18.195;HRun=0;HaplotypeScore=15.1193;MQ=38.19;MQ0=68;MQRankSum=0.934;QD=20.04;ReadPosRankSum=1.557;VQSLOD=1.5242;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,1:1:3.01:52,3,0	0/0:19,0:3:5.10:0,5,47	0/0:9,0:2:2.61:0,3,19	1/1:2,3:3:8.94:102,9,0	./.	./.	./.	./.	./.	1/1:1,2:2:6.02:102,6,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:1,1:1:3.01:52,3,0	./.	./.	./.	./.	./.	./.	./.	1/1:4,3:3:9.03:158,9,0
chr10	87894519	.	CTCCTCCTCTCTCTCTTCA	C	619.29	PASS	AB=0.773;AC=2;AF=0.038;AN=52;BaseQRankSum=4.215;DP=399;FS=0.000;HRun=0;HaplotypeScore=177.4138;InbreedingCoeff=-0.0626;MQ=66.23;MQ0=6;MQRankSum=-1.685;QD=17.69;ReadPosRankSum=0.603;VQSLOD=1.8945;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:3,15:18:76.83:647,0,77	./.	0/0:50,0:14:37.54:0,38,636	0/0:61,0:36:76.08:0,76,2116	0/0:1,0:1:3.01:0,3,258	0/0:13,0:13:33.03:0,33,1896	0/0:18,0:18:41.88:0,42,1936	0/0:21,0:20:51.18:0,51,3086	0/0:9,0:9:27.02:0,27,1485	0/0:11,0:11:30.05:0,30,1918	0/0:6,0:6:11.90:0,12,554	0/0:8,0:8:14.64:0,15,688	0/0:11,0:11:27.05:0,27,1649	0/0:15,0:15:41.88:0,42,2189	0/0:16,0:16:45.09:0,45,2631	0/0:16,0:16:38.97:0,39,2114	0/0:16,0:16:42.07:0,42,2208	0/0:8,0:8:24.06:0,24,1273	0/0:18,0:18:42.12:0,42,2389	0/0:2,0:2:5.93:0,6,40	0/1:17,0:17:60.12:60,0,2120	0/0:8,0:8:11.97:0,12,586	0/0:3,0:3:3.01:0,3,259	0/0:17,0:17:42.14:0,42,2171	./.	0/0:11,0:11:18.03:0,18,1189	0/0:15,0:15:38.96:0,39,1976	0/0:6,0:6:17.99:0,18,356
chr10	87895166	.	T	TA	1949.53	PASS	AB=0.933;AC=36;AF=0.643;AN=56;BaseQRankSum=3.315;DP=412;FS=22.552;HRun=14;HaplotypeScore=59.4542;InbreedingCoeff=0.4783;MQ=77.04;MQ0=4;MQRankSum=-1.034;QD=6.37;ReadPosRankSum=-1.950;VQSLOD=0.2064;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,3:28:23.67:151,24,0	1/1:5,0:5:2.99:24,3,0	0/0:15,0:8:2.11:0,2,7	0/0:18,0:12:3.58:0,4,21	0/1:20,0:21:14.56:15,0,111	1/1:1,0:17:22.73:113,23,0	1/1:4,0:16:14.20:71,14,0	0/1:11,0:11:10.79:23,0,11	0/0:10,0:10:11.67:0,12,77	1/1:5,4:9:8.96:70,9,0	1/1:7,10:17:2.57:134,3,0	1/1:1,0:9:11.48:62,11,0	0/0:9,0:9:17.62:0,18,114	1/1:6,0:13:4.87:21,5,0	0/1:13,1:14:38.24:38,0,120	0/0:9,0:9:0.10:0,0,95	1/1:7,18:25:45.72:386,46,0	1/1:5,0:17:25.22:123,25,0	1/1:10,8:18:8.70:170,9,0	1/1:4,11:15:25.91:196,26,0	0/1:6,2:8:11.64:12,0,59	1/1:1,2:7:8.64:47,9,0	0/0:16,1:20:12.11:0,12,182	0/0:9,0:9:11.68:0,12,77	0/0:14,0:14:17.48:0,17,113	1/1:12,1:27:35.42:199,35,0	1/1:12,4:15:29.77:237,30,0	1/1:7,0:13:8.52:42,9,0
chr10	87895924	.	CAAGAAGAAGAAGAAG	C	2981.36	PASS	AB=0.816;AC=22;AF=0.407;AN=54;BaseQRankSum=8.675;DP=593;FS=2.805;HRun=0;HaplotypeScore=229.9981;InbreedingCoeff=0.5701;MQ=60.72;MQ0=10;MQRankSum=-4.023;QD=14.54;ReadPosRankSum=0.834;VQSLOD=2.7001;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:46.01:0,46,1857	0/1:6,0:10:14.48:14,0,40	./.	0/0:24,0:14:0.15:0,0,35	0/0:26,0:26:51.63:0,52,1720	1/1:8,11:19:12.04:394,12,0	1/1:17,0:17:15.04:366,15,0	0/0:32,0:31:15.94:0,16,452	0/0:24,0:24:51.17:0,51,2481	0/1:9,0:25:99:409,0,106	1/1:10,0:14:2.74:13,3,0	1/1:6,8:14:6.02:213,6,0	0/0:14,0:14:21.07:0,21,1123	1/1:9,9:18:15.05:543,15,0	0/0:29,0:29:57.20:0,57,2541	0/0:28,0:28:48.16:0,48,2711	0/1:14,0:14:67.70:147,0,68	1/1:11,0:11:9.03:245,9,0	0/0:14,0:14:15.05:0,15,726	0/0:17,0:17:42.14:0,42,1726	0/0:30,0:30:60.21:0,60,2721	1/1:5,11:16:6.02:164,6,0	0/0:15,0:15:24.07:0,24,928	0/0:39,0:39:99:0,99,4379	0/1:15,0:16:62.92:63,0,1662	1/1:14,0:24:21.46:393,21,0	0/0:28,0:28:42.14:0,42,2113	1/1:6,0:6:12.04:209,12,0
chr10	87896251	.	GT	G	1311.32	PASS	AB=0.883;AC=20;AF=0.357;AN=56;BaseQRankSum=0.002;DP=465;FS=7.331;HRun=11;HaplotypeScore=62.3868;InbreedingCoeff=0.5467;MQ=66.02;MQ0=7;MQRankSum=0.641;QD=5.99;ReadPosRankSum=-0.502;VQSLOD=1.2432;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,21:28:13.24:223,13,0	0/0:8,0:8:15.03:0,15,156	0/0:31,0:14:7.78:0,8,53	0/1:19,0:9:6.66:7,0,72	0/1:16,0:16:3.17:3,0,223	1/1:9,1:10:22.14:176,22,0	0/1:5,10:15:3.77:19,0,4	0/0:25,1:27:40.68:0,41,548	0/0:7,0:7:5.88:0,6,43	0/1:20,0:20:6.91:7,0,320	0/0:11,0:11:1.98:0,2,117	1/1:6,0:6:17.66:134,18,0	0/0:7,0:7:13.22:0,13,118	1/1:10,3:13:22.57:163,23,0	0/0:6,0:6:11.62:0,12,104	0/0:14,1:15:8.24:0,8,268	0/1:26,0:26:0.97:1,0,321	0/1:9,7:15:33.85:157,0,34	0/0:30,0:28:46.05:0,46,660	0/0:17,0:18:20.31:0,20,401	0/0:19,0:18:32.98:0,33,332	1/1:5,6:11:8.96:71,9,0	0/0:8,0:8:24.01:0,24,243	0/0:14,0:13:26.93:0,27,268	0/0:24,0:24:56.33:0,56,534	1/1:4,20:24:53.79:431,54,0	0/0:20,0:19:38.68:0,39,375	1/1:6,7:12:14.65:109,15,0
chr10	87896270	.	T	TC	1396.64	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.287;DP=438;FS=4.523;HRun=0;HaplotypeScore=55.1251;InbreedingCoeff=0.9400;MQ=52.24;MQ0=28;MQRankSum=1.961;QD=21.49;ReadPosRankSum=4.301;VQSLOD=5.5456;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:29:48.67:0,49,460	0/0:8,0:7:17.97:0,18,162	0/0:25,0:8:16.09:0,16,98	0/0:16,0:6:11.77:0,12,117	0/0:13,0:12:32.64:0,33,269	0/0:12,0:11:32.78:0,33,315	0/0:13,0:11:14.79:0,15,135	0/0:22,0:20:54.33:0,54,480	0/0:7,0:5:10.80:0,11,99	0/0:13,0:12:36.01:0,36,329	0/0:13,0:10:29.86:0,30,234	0/0:7,0:6:17.99:0,18,166	0/0:6,0:6:18:0,18,195	0/0:10,0:10:26.28:0,26,229	0/0:8,0:7:18:0,18,180	0/0:15,0:14:35.92:0,36,334	0/0:26,0:26:62.80:0,63,508	0/0:19,0:18:30.51:0,31,326	1/1:3,25:25:71.56:753,72,0	1/1:1,11:11:32.70:335,33,0	0/0:19,0:17:43.38:0,43,380	0/0:6,0:6:11.91:0,12,101	0/0:10,0:8:23.96:0,24,222	0/0:15,0:12:31.51:0,32,310	0/0:24,0:24:66:0,66,616	0/0:23,0:23:64.94:0,65,574	1/1:4,20:23:39.86:452,40,0	0/0:10,0:9:21.03:0,21,249
chr10	87896356	.	TG	T	630.64	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=7.379;DP=370;FS=5.071;HRun=1;HaplotypeScore=53.3431;InbreedingCoeff=0.6190;MQ=59.69;MQ0=16;MQRankSum=-2.968;QD=7.51;ReadPosRankSum=-3.699;VQSLOD=-0.6870;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,2:21:17.98:0,18,98	1/1:0,1:1:3:28,3,0	0/0:12,0:7:16.60:0,17,226	0/1:15,0:8:4.99:39,0,5	0/0:15,0:14:33:0,33,440	0/0:5,0:4:12.04:0,12,179	0/0:18,0:17:51:0,51,706	0/0:28,0:26:74.11:0,74,978	0/0:6,0:6:18.05:0,18,249	1/1:7,6:12:28.73:236,29,0	1/1:4,4:7:17.91:142,18,0	0/0:10,0:9:27.09:0,27,402	0/0:5,0:5:11.91:0,12,176	0/0:8,0:6:18.04:0,18,248	0/0:15,0:14:39.03:0,39,580	0/0:10,0:9:21.07:0,21,313	1/1:8,11:19:40.95:298,41,0	0/0:14,0:14:36.12:0,36,537	0/1:20,0:17:14.88:15,0,246	0/1:8,0:6:18.89:38,0,19	0/0:13,0:12:30.02:0,30,418	0/0:8,0:8:21.07:0,21,312	0/0:7,0:6:15.05:0,15,222	0/0:17,0:16:48.14:0,48,690	0/0:10,0:10:24.08:0,24,359	0/0:24,0:22:60.13:0,60,869	0/0:17,0:16:8.95:0,9,231	0/0:21,0:20:54.41:0,54,822
chr10	87896362	.	TTG	T	1377.18	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=7.948;DP=379;FS=19.633;HRun=0;HaplotypeScore=59.7265;InbreedingCoeff=0.7474;MQ=63.73;MQ0=11;MQRankSum=-5.712;QD=11.29;ReadPosRankSum=-5.574;VQSLOD=0.8445;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:24,1:23:46.39:406,46,0	1/1:1,0:1:3.01:42,3,0	0/0:15,0:10:21.59:0,22,230	0/0:15,0:8:7.67:0,8,36	0/0:13,0:13:36.08:0,36,498	0/0:4,0:4:12.02:0,12,164	0/0:17,0:16:47.72:0,48,619	0/0:26,0:24:69.91:0,70,942	0/0:6,0:6:18.06:0,18,279	1/1:16,1:17:31.52:287,32,0	1/1:8,0:7:16.86:199,17,0	0/0:9,0:9:27.09:0,27,419	0/0:5,0:5:11.99:0,12,177	0/0:9,0:7:21.02:0,21,297	0/0:18,0:18:48.09:0,48,688	0/0:11,0:11:27.08:0,27,388	1/1:22,3:25:47.59:459,48,0	0/0:13,0:13:39.08:0,39,568	0/1:22,0:18:7.35:80,0,7	1/1:7,0:5:8.73:39,9,0	0/0:13,0:12:29.98:0,30,404	0/0:9,0:9:23.70:0,24,271	0/0:5,0:5:15.05:0,15,221	0/0:18,0:17:51.16:0,51,760	0/0:9,0:9:24.03:0,24,286	0/0:21,0:21:52.84:0,53,515	0/1:17,0:16:46.95:47,0,61	0/0:21,0:20:59.98:0,60,550
chr10	87896363	.	TG	T	1804.47	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=7.746;DP=375;FS=16.227;HRun=1;HaplotypeScore=51.9112;InbreedingCoeff=0.8876;MQ=64.11;MQ0=9;MQRankSum=-6.224;QD=13.57;ReadPosRankSum=-5.164;VQSLOD=0.1053;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,10:22:46.38:395,46,0	1/1:0,1:1:3:29,3,0	0/0:15,0:10:21.70:0,22,178	0/1:14,0:8:3.15:3,0,17	0/0:13,0:13:35.96:0,36,380	0/0:4,0:4:12.02:0,12,130	0/0:17,0:16:44.95:0,45,473	0/0:29,0:27:56.12:0,56,767	0/0:6,0:6:18.05:0,18,213	1/1:13,3:16:43.82:372,44,0	1/1:3,4:7:21:187,21,0	0/0:9,0:9:27.08:0,27,319	0/0:5,0:5:8.34:0,8,122	0/0:9,0:7:21.01:0,21,233	0/0:17,0:17:47.99:0,48,534	0/0:11,0:11:27.06:0,27,300	1/1:17,8:25:56.19:425,56,0	0/0:13,0:13:39.06:0,39,435	1/1:21,1:18:43.96:333,44,0	1/1:7,0:5:14.30:104,14,0	0/0:12,0:11:29.94:0,30,312	0/0:9,0:9:19.68:0,20,202	0/0:5,0:5:15.03:0,15,162	0/0:18,0:17:51.13:0,51,583	0/0:8,0:8:23.82:0,24,229	0/0:21,0:21:50.16:0,50,320	1/1:16,0:16:27.15:157,27,0	0/0:21,0:20:56.58:0,57,304
chr10	87896364	.	G	GT	1094.89	PASS	AB=0.958;AC=15;AF=0.268;AN=56;BaseQRankSum=-1.907;DP=372;FS=12.603;HRun=10;HaplotypeScore=54.2700;InbreedingCoeff=0.4726;MQ=64.34;MQ0=7;MQRankSum=0.762;QD=8.42;ReadPosRankSum=-2.517;VQSLOD=0.1451;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:10.70:0,11,31	0/0:1,0:1:1.82:0,2,5	0/1:15,0:10:3.59:4,0,100	0/0:15,0:8:7.64:0,8,47	0/0:12,0:12:32.95:0,33,270	0/0:4,0:4:8.99:0,9,74	0/0:17,0:16:37.99:0,38,301	0/0:29,0:27:55.53:0,56,438	0/0:6,0:6:11.96:0,12,99	0/0:16,0:16:8.07:0,8,26	0/1:7,0:7:10.57:12,0,11	0/0:9,0:9:23.96:0,24,197	0/1:5,0:5:7.74:8,0,62	0/0:9,0:7:20.97:0,21,172	0/0:17,0:17:44.83:0,45,369	0/0:11,0:11:26.97:0,27,221	0/0:25,0:25:19.68:0,20,67	0/0:13,0:13:35.93:0,36,291	1/1:22,0:18:2.26:86,2,0	1/1:6,0:5:9.72:61,10,0	0/0:11,0:11:26.96:0,27,221	0/1:7,1:9:11.97:12,0,109	0/0:5,0:5:8.97:0,9,74	0/0:17,0:17:31.17:0,31,368	0/1:7,1:8:17.01:17,0,84	1/1:5,16:21:45.11:479,45,0	1/1:16,0:16:13.20:73,13,0	1/1:4,17:20:49.01:514,49,0
chr10	87896373	.	TTA	T	250.23	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.236;DP=362;FS=0.944;HRun=0;HaplotypeScore=61.9140;InbreedingCoeff=0.7757;MQ=67.61;MQ0=2;MQRankSum=-4.976;QD=10.88;ReadPosRankSum=-0.819;VQSLOD=3.1535;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,10:22:43.72:345,44,0	0/0:1,0:1:1.82:0,2,5	0/0:15,0:10:30.08:0,30,384	0/0:11,0:7:12:0,12,152	0/0:13,0:13:39.11:0,39,665	0/0:4,0:4:12.03:0,12,194	0/0:17,0:15:45:0,45,746	0/0:29,0:28:83.51:0,84,1236	0/0:7,0:7:21.03:0,21,298	0/0:15,0:15:41.88:0,42,443	0/0:8,0:8:19.23:0,19,164	0/0:12,0:12:36.04:0,36,541	0/0:5,0:5:15.04:0,15,241	0/0:9,0:9:27.07:0,27,443	0/0:17,0:17:51.15:0,51,888	0/0:11,0:11:33.09:0,33,552	0/0:24,0:24:41.60:0,42,439	0/0:15,0:15:45.08:0,45,715	0/0:21,0:19:49.29:0,49,584	0/0:6,0:5:15.04:0,15,185	0/0:11,0:11:27.09:0,27,502	0/0:7,0:7:20.94:0,21,331	0/0:4,0:4:12.03:0,12,194	0/0:19,0:19:57.17:0,57,989	0/0:5,0:5:15.05:0,15,260	0/0:19,0:19:51.13:0,51,600	0/0:15,0:15:39.30:0,39,335	0/0:19,0:18:54.14:0,54,665
chr10	87896644	.	TAAATAAATAAAA	T	1454.76	PASS	AB=1.000;AC=24;AF=0.444;AN=54;BaseQRankSum=2.001;DP=193;FS=10.180;HRun=0;HaplotypeScore=60.0370;InbreedingCoeff=0.4076;MQ=55.97;MQ0=5;MQRankSum=0.471;QD=14.69;ReadPosRankSum=-1.880;VQSLOD=0.1070;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:2.90:20,3,0	0/1:4,0:4:18.97:19,0,130	0/0:3,0:1:3:0,3,27	0/0:9,0:1:2.99:0,3,24	0/0:3,0:3:9.02:0,9,210	1/1:0,11:11:9.03:336,9,0	1/1:5,0:5:14.92:168,15,0	0/0:21,0:20:60.08:0,60,1072	0/0:4,0:4:12.02:0,12,209	0/1:6,0:6:34.54:97,0,35	0/0:2,0:2:3.90:0,4,142	1/1:0,5:5:3.01:112,3,0	0/0:3,0:3:9.02:0,9,176	1/1:0,4:4:3.01:112,3,0	0/0:3,0:3:9.02:0,9,222	0/0:5,0:5:15.02:0,15,157	0/0:34,0:33:20.26:0,20,2646	1/1:1,11:12:6.02:190,6,0	0/1:10,0:9:70.26:70,0,240	1/1:4,0:4:8.84:55,9,0	0/0:2,0:2:6.02:0,6,192	1/1:2,0:2:5.92:42,6,0	0/0:2,0:2:6:0,6,54	./.	0/0:3,0:3:9.01:0,9,83	1/1:0,8:8:23.93:238,24,0	0/1:10,0:10:59.86:60,0,746	1/1:0,9:9:3.01:112,3,0
chr10	87896648	.	TAAATAAAA	T	1268.72	PASS	AB=1.000;AC=27;AF=0.500;AN=54;BaseQRankSum=3.404;DP=203;FS=4.186;HRun=0;HaplotypeScore=52.8893;InbreedingCoeff=0.3906;MQ=59.04;MQ0=5;MQRankSum=1.351;QD=9.13;ReadPosRankSum=-1.308;VQSLOD=1.3087;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:6.02:120,6,0	0/1:2,0:2:18.97:19,0,78	0/0:4,0:2:5.75:0,6,39	0/0:9,0:1:2.99:0,3,24	0/0:3,0:3:9.01:0,9,133	1/1:11,0:11:9.03:194,9,0	1/1:6,0:6:17.92:154,18,0	0/0:23,0:22:63.05:0,63,789	0/0:5,0:5:15.02:0,15,187	1/1:7,0:7:7.59:126,8,0	0/1:3,0:3:18.49:18,0,83	1/1:5,0:5:3.01:65,3,0	0/0:3,0:3:9.02:0,9,130	1/1:4,0:4:3.01:64,3,0	0/0:4,0:4:12.02:0,12,164	0/0:5,0:5:12.01:0,12,112	0/1:34,0:33:54.55:55,0,1319	1/1:12,0:12:6.02:117,6,0	0/1:10,0:9:91.08:91,0,111	1/1:5,0:5:8.83:55,9,0	0/0:2,0:2:6.01:0,6,109	1/1:3,0:3:8.91:66,9,0	0/0:3,0:3:9:0,9,81	./.	0/0:3,0:3:9.01:0,9,83	1/1:8,0:8:22.94:169,23,0	0/1:11,0:11:73.84:74,0,473	1/1:9,0:9:3.01:65,3,0
chr10	87897499	.	CT	C	605.21	PASS	AB=0.863;AC=13;AF=0.232;AN=56;BaseQRankSum=-1.509;DP=477;FS=1.794;HRun=16;HaplotypeScore=66.2251;InbreedingCoeff=0.3411;MQ=59.21;MQ0=9;MQRankSum=2.597;QD=3.83;ReadPosRankSum=4.090;VQSLOD=0.4063;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:34:19.36:0,19,102	0/0:7,0:10:17.82:0,18,98	0/0:12,0:6:5.48:0,5,24	0/0:15,1:7:5.49:0,5,34	0/0:13,2:15:0.83:0,1,83	1/1:13,6:18:0.55:113,1,0	1/1:16,14:29:8.87:246,9,0	0/1:22,3:25:25.03:25,0,145	0/0:4,0:4:6.85:0,7,37	0/0:9,0:19:32.82:0,33,190	0/0:7,0:13:13.12:0,13,62	0/1:13,0:14:24.53:44,0,25	0/0:5,0:5:6.70:0,7,63	0/1:11,1:12:13.33:26,0,13	0/0:17,0:17:30.14:0,30,239	0/0:12,0:12:20.64:0,21,150	0/0:4,0:28:17.22:0,17,98	0/1:19,4:23:3.17:79,0,3	0/0:21,1:22:14.62:0,15,186	0/0:16,4:20:16.15:0,16,117	0/0:12,0:12:12.40:0,12,93	1/1:5,3:9:10.80:60,11,0	0/0:16,1:20:6.26:0,6,223	0/0:22,0:23:51.15:0,51,369	0/0:13,0:13:12.36:0,12,133	0/1:11,6:16:20.15:98,0,20	0/0:23,0:22:26.97:0,27,266	1/1:5,3:7:11.76:72,12,0
chr10	87898325	.	T	TA	517.26	PASS	AB=0.563;AC=6;AF=0.107;AN=56;BaseQRankSum=2.901;DP=340;FS=0.693;HRun=0;HaplotypeScore=56.7706;InbreedingCoeff=0.5081;MQ=55.21;MQ0=12;MQRankSum=-2.994;QD=10.35;ReadPosRankSum=-0.042;VQSLOD=3.6459;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:42.57:0,43,524	0/1:2,6:10:30.32:161,0,30	0/0:5,0:2:6:0,6,54	0/0:7,0:4:8.48:0,8,44	0/0:20,0:18:54.07:0,54,674	0/0:9,0:9:21.03:0,21,261	0/0:5,0:5:9.03:0,9,120	0/0:16,0:13:33.09:0,33,422	0/0:10,0:10:30.05:0,30,377	1/1:11,6:16:17.89:209,18,0	1/1:5,2:6:9.01:83,9,0	0/0:6,0:6:18.06:0,18,244	0/0:6,0:6:18.06:0,18,251	0/0:8,0:8:21.07:0,21,283	0/0:14,0:14:36.11:0,36,483	0/0:9,0:9:23.87:0,24,299	0/1:4,12:15:11.30:193,0,11	0/0:20,0:20:57.17:0,57,741	0/0:15,0:12:20.12:0,20,395	0/0:19,0:19:51.17:0,51,676	0/0:14,0:8:18.03:0,18,218	0/0:1,0:1:3.01:0,3,37	0/0:7,0:7:14.96:0,15,201	0/0:9,0:9:18.02:0,18,226	0/0:16,0:16:48.16:0,48,666	0/0:19,0:20:58.97:0,59,731	0/0:15,0:11:26.91:0,27,331	0/0:17,0:17:48.11:0,48,609
chr10	87898326	.	TA	T	2397.06	PASS	AB=0.800;AC=25;AF=0.446;AN=56;BaseQRankSum=1.245;DP=348;FS=12.800;HRun=12;HaplotypeScore=52.1316;InbreedingCoeff=0.8548;MQ=56.79;MQ0=11;MQRankSum=-0.321;QD=14.35;ReadPosRankSum=3.156;VQSLOD=3.0628;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,14:22:35.74:268,36,0	0/0:11,0:11:25.80:0,26,144	0/0:4,0:2:6.01:0,6,58	0/0:8,0:5:11.29:0,11,77	0/0:22,0:21:10.64:0,11,387	1/1:3,7:10:20.81:156,21,0	1/1:0,5:5:8.97:70,9,0	0/0:16,0:13:27:0,27,253	0/0:10,0:10:26.90:0,27,248	0/0:18,0:17:34.45:0,34,185	0/0:7,0:7:11.50:0,11,61	1/1:0,6:6:17.93:139,18,0	0/0:7,0:7:18.02:0,18,175	1/1:3,5:8:14.94:116,15,0	0/0:13,0:13:30.01:0,30,288	0/0:9,0:9:21.04:0,21,213	0/0:17,0:15:22.28:0,22,113	1/1:4,16:20:47.79:368,48,0	1/1:5,11:13:32.86:254,33,0	1/1:5,13:19:37.86:284,38,0	0/0:12,0:8:16.59:0,17,156	1/1:0,1:1:2.99:23,3,0	0/1:6,2:8:31.48:31,0,66	0/0:9,0:9:14.95:0,15,137	0/0:16,0:16:45.09:0,45,457	1/1:4,16:20:49.82:376,50,0	1/1:3,10:11:26.72:204,27,0	1/1:2,15:17:31.84:328,32,0
chr10	87898413	.	TTC	T	926.43	PASS	AB=0.947;AC=14;AF=0.250;AN=56;BaseQRankSum=7.217;DP=386;FS=40.712;HRun=0;HaplotypeScore=61.1473;InbreedingCoeff=0.0917;MQ=47.26;MQ0=52;MQRankSum=0.506;QD=7.18;ReadPosRankSum=-6.037;VQSLOD=0.0370;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:44.96:0,45,525	0/0:5,0:5:2.93:0,3,70	0/0:11,0:3:7.78:0,8,50	0/0:19,0:4:2.70:0,3,37	0/0:30,0:29:64.54:0,65,841	0/1:13,1:11:68.60:69,0,115	1/1:5,1:4:8.96:69,9,0	0/0:28,0:21:50.24:0,50,620	0/0:10,0:9:26.78:0,27,315	0/0:16,0:13:15.62:0,16,321	0/0:12,0:11:21.90:0,22,188	0/1:9,0:8:26.06:101,0,26	0/0:15,0:10:7.95:0,8,216	1/1:6,0:3:5.84:41,6,0	0/0:19,0:13:30.76:0,31,456	0/0:10,0:10:27.09:0,27,384	0/0:19,0:14:28.98:0,29,219	0/1:18,1:10:57.30:57,0,58	0/1:21,1:19:99:223,0,195	0/1:6,2:7:25.12:78,0,25	0/0:5,0:2:6.02:0,6,89	0/1:7,0:7:52.48:89,0,52	0/0:9,0:9:14.08:0,14,131	0/0:16,0:8:9.03:0,9,131	0/0:13,0:11:17.96:0,18,247	0/1:13,1:13:80.61:164,0,81	0/1:15,0:13:81.76:82,0,98	1/1:9,0:8:5.48:111,5,0
chr10	87898885	.	T	TC	699.76	PASS	AB=0.794;AC=10;AF=0.179;AN=56;BaseQRankSum=10.358;DP=522;FS=86.931;HRun=0;HaplotypeScore=105.9501;InbreedingCoeff=-0.2158;MQ=57.25;MQ0=0;MQRankSum=-8.580;QD=5.38;ReadPosRankSum=4.688;VQSLOD=-0.0122;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,2:31:19.03:0,19,1024	0/1:1,1:2:28:28,0,36	0/0:25,0:16:48.16:0,48,648	0/0:15,0:9:17.82:0,18,252	0/0:34,0:34:99:0,102,1425	0/0:18,1:19:12.74:0,13,615	0/0:18,1:19:38.49:0,38,636	0/0:29,0:29:84.26:0,84,1143	0/0:20,0:20:57.19:0,57,797	0/1:9,5:14:99:125,0,331	0/1:13,2:15:27.10:27,0,422	0/0:12,0:12:30.10:0,30,419	0/0:13,0:13:39.13:0,39,544	0/1:12,4:16:91.82:92,0,455	0/0:22,0:22:66.19:0,66,889	0/0:24,0:24:72.24:0,72,1007	0/0:30,1:31:50.51:0,51,1121	0/0:20,0:20:57.19:0,57,797	0/1:9,1:9:12.99:13,0,308	0/1:3,3:6:93.50:94,0,108	0/0:23,0:23:66.22:0,66,923	0/1:7,1:8:13.24:13,0,269	0/0:15,0:15:45.11:0,45,607	0/0:19,0:19:57.19:0,57,796	0/0:20,0:20:57.19:0,57,797	0/1:13,4:17:99:107,0,493	0/1:20,2:22:13.69:14,0,694	0/1:10,10:20:99:331,0,359
chr10	87898888	.	C	CA	796.83	PASS	AB=0.791;AC=10;AF=0.179;AN=56;BaseQRankSum=10.236;DP=520;FS=88.884;HRun=0;HaplotypeScore=103.7025;InbreedingCoeff=-0.2189;MQ=55.05;MQ0=0;MQRankSum=-9.154;QD=6.27;ReadPosRankSum=5.598;VQSLOD=-0.4096;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,2:32:16.10:0,16,1021	0/1:1,1:2:30.83:31,0,36	0/0:25,0:15:45.11:0,45,598	0/0:16,0:7:18.95:0,19,254	0/0:35,0:35:99:0,105,1448	0/0:18,1:19:10.08:0,10,630	0/0:18,1:19:32.96:0,33,597	0/0:27,0:27:78.26:0,78,1091	0/0:21,0:21:63.19:0,63,860	0/1:8,5:13:99:139,0,296	0/1:13,2:15:29.43:29,0,460	0/0:13,0:13:33.11:0,33,461	0/0:12,0:12:36.12:0,36,503	0/1:12,4:16:99:104,0,455	0/0:20,0:20:60.20:0,60,839	0/0:23,0:23:69.23:0,69,965	0/0:31,1:32:47.31:0,47,1095	0/0:20,0:20:57.19:0,57,797	0/1:8,1:9:16.38:16,0,308	0/1:3,3:6:99:103,0,108	0/0:23,0:23:69.21:0,69,947	0/1:7,1:8:15.80:16,0,266	0/0:15,0:15:42.14:0,42,587	0/0:20,0:20:60.18:0,60,820	0/0:21,0:21:60.19:0,60,822	0/1:12,4:16:99:124,0,440	0/1:20,2:22:17.08:17,0,730	0/1:10,10:20:99:362,0,341
chr10	87898891	.	T	TACAC	2287.70	PASS	AB=0.836;AC=14;AF=0.250;AN=56;BaseQRankSum=10.468;DP=517;FS=78.196;HRun=0;HaplotypeScore=126.1292;InbreedingCoeff=-0.3264;MQ=55.04;MQ0=0;MQRankSum=-8.881;QD=10.03;ReadPosRankSum=5.531;VQSLOD=-0.4058;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,2:32:62.81:63,0,1525	0/1:1,1:2:56.80:62,0,57	0/0:24,0:14:42.14:0,42,881	0/0:16,0:7:17.31:0,17,365	0/0:35,0:35:99:0,102,2128	0/1:19,1:20:33.26:33,0,956	0/1:19,1:20:13.90:14,0,962	0/0:27,0:27:78.19:0,78,1600	0/0:20,0:20:60.19:0,60,1207	0/1:8,5:13:99:333,0,464	0/1:13,2:15:99:117,0,713	0/0:13,0:13:36.12:0,36,741	0/0:12,0:12:36.12:0,36,755	0/1:11,4:15:99:278,0,647	0/0:20,0:20:60.21:0,60,1258	0/0:23,0:23:69.24:0,69,1446	0/1:31,1:32:6.03:6,0,1563	0/0:20,0:20:57.20:0,57,1178	0/1:9,1:10:57.45:57,0,476	0/1:3,3:6:99:235,0,171	0/0:23,0:23:69.24:0,69,1447	0/1:7,1:8:59.85:60,0,416	0/0:14,0:14:42.14:0,42,881	0/0:21,0:21:63.20:0,63,1246	0/0:21,0:21:63.19:0,63,1274	0/1:11,4:15:99:289,0,647	0/1:19,2:21:99:109,0,1064	0/1:9,10:19:99:787,0,509
chr10	87899207	.	CTTCTTTCT	C	2016.75	PASS	AB=0.793;AC=15;AF=0.313;AN=48;BaseQRankSum=3.111;DP=561;FS=23.133;HRun=0;HaplotypeScore=148.0418;InbreedingCoeff=0.8089;MQ=65.05;MQ0=1;MQRankSum=-6.361;QD=12.37;ReadPosRankSum=-0.781;VQSLOD=1.1937;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:36:60.19:0,60,2137	0/0:1,0:4:8.99:0,9,229	./.	./.	1/1:16,8:24:12.04:252,12,0	0/0:20,0:28:27.05:0,27,755	0/0:17,0:21:12.04:0,12,345	./.	1/1:16,7:23:12.04:294,12,0	0/0:16,0:19:27.09:0,27,880	0/0:12,0:15:27.09:0,27,710	0/0:9,0:21:30.08:0,30,926	1/1:11,8:19:17.85:438,18,0	0/0:25,0:25:36.12:0,36,1349	1/1:13,10:23:21.07:515,21,0	1/1:10,3:16:12.04:241,12,0	0/0:19,0:31:30.10:0,30,924	0/0:12,0:12:9.03:0,9,318	0/0:16,0:16:12.03:0,12,392	0/0:8,0:17:29.72:0,30,902	./.	0/0:19,0:19:27.09:0,27,1010	1/1:15,3:18:2.33:72,2,0	0/1:17,6:23:11.88:12,0,37	1/1:10,7:17:15.05:368,15,0	0/0:20,0:28:26.96:0,27,251	0/0:19,0:26:38.95:0,39,1189	0/0:17,0:21:11.93:0,12,90
chr10	87901564	.	CT	C	1222.75	PASS	AB=0.881;AC=25;AF=0.446;AN=56;BaseQRankSum=-0.877;DP=646;FS=0.436;HRun=16;HaplotypeScore=101.2482;InbreedingCoeff=0.3462;MQ=60.05;MQ0=17;MQRankSum=2.230;QD=3.10;ReadPosRankSum=1.212;VQSLOD=0.3954;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:41,13:55:9.63:347,10,0	1/1:4,3:8:10.36:55,10,0	0/1:39,0:17:3.74:4,0,56	0/1:37,3:20:13.94:14,0,50	0/0:30,1:31:48.97:0,49,423	1/1:12,9:21:6.92:40,7,0	1/1:16,4:20:17.20:107,17,0	0/0:30,0:30:30.95:0,31,240	0/0:16,0:15:26.80:0,27,212	1/1:11,4:15:27.36:154,27,0	0/1:13,1:17:8.37:36,0,8	0/1:23,2:22:8.13:92,0,8	0/0:11,0:11:14.94:0,15,119	0/1:15,0:15:12.54:13,0,33	0/0:25,0:24:26.53:0,27,285	0/0:15,0:16:38.09:0,38,276	1/1:19,13:32:3.09:154,3,0	0/1:17,11:30:4.06:132,0,4	0/0:24,1:24:11.72:0,12,256	0/1:15,2:17:1.71:2,0,131	0/0:19,1:20:3.76:0,4,143	1/1:9,9:17:4.26:35,4,0	0/1:10,1:9:10.56:11,0,76	0/0:36,2:37:16.41:0,16,355	0/0:21,0:19:32.77:0,33,258	1/1:4,13:16:29.65:167,30,0	0/0:15,0:15:37.51:0,38,305	0/1:9,2:10:32.41:47,0,32
chr10	87902182	.	A	AAAAC	10502.61	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=14.067;DP=676;FS=21.224;HRun=0;HaplotypeScore=125.5248;InbreedingCoeff=0.9416;MQ=57.07;MQ0=1;MQRankSum=-4.972;QD=28.23;ReadPosRankSum=0.930;VQSLOD=3.3665;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:43,0:43:75.30:1079,75,0	1/1:10,0:10:24.07:301,24,0	0/0:28,0:17:13.48:0,13,199	0/0:14,0:9:6.39:0,6,90	0/0:29,0:29:66.18:0,66,990	1/1:22,0:21:30.10:518,30,0	1/1:12,0:12:9.03:155,9,0	0/0:32,0:32:63.18:0,63,972	0/0:22,0:22:42.12:0,42,617	1/1:37,0:37:99:1172,99,0	1/1:10,0:10:21.06:252,21,0	1/1:15,0:15:24.08:404,24,0	0/0:30,0:30:72.18:0,72,1092	1/1:24,0:24:27.09:459,27,0	0/0:26,0:26:57.18:0,57,909	0/0:22,0:22:57.19:0,57,950	1/1:40,0:40:84.26:1011,84,0	1/1:14,0:14:9.03:156,9,0	1/1:10,12:23:37.98:672,38,0	1/1:8,24:32:68.95:1414,69,0	0/0:21,0:21:54.17:0,54,859	1/1:38,0:38:53.58:839,54,0	0/0:20,0:20:51.17:0,51,830	0/0:37,0:37:93.24:0,93,1431	0/0:23,0:23:57.18:0,57,928	1/1:18,0:18:39.12:627,39,0	1/1:2,26:30:57.20:1391,57,0	1/1:2,0:2:3.01:52,3,0
chr10	87902195	.	A	AAACAAAC	10499.41	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=7.818;DP=693;FS=25.685;HRun=0;HaplotypeScore=160.4975;InbreedingCoeff=0.7524;MQ=61.65;MQ0=1;MQRankSum=-5.889;QD=27.63;ReadPosRankSum=6.847;VQSLOD=2.8748;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:44:76.31:521,76,0	1/1:0,0:14:23.35:186,23,0	0/0:25,0:14:20.71:0,21,348	0/0:15,0:10:21.62:0,22,262	0/0:32,0:32:96.25:0,96,1927	1/1:0,22:23:30.10:1167,30,0	1/1:1,8:14:6.02:233,6,0	0/0:34,0:34:90.27:0,90,1829	0/0:17,0:17:42.12:0,42,942	1/1:1,0:37:99:683,105,0	1/1:1,0:12:29.25:195,29,0	1/1:1,19:24:24.08:927,24,0	0/0:28,0:28:81.24:0,81,1816	1/1:1,15:21:27.09:1049,27,0	0/0:29,0:29:87.24:0,87,1775	0/0:23,0:23:63.21:0,63,1564	1/1:0,0:38:81.45:483,81,0	1/1:1,8:13:9.03:351,9,0	0/1:21,0:20:99:176,0,228	0/1:29,0:28:25.79:390,0,26	0/0:25,0:25:69.21:0,69,1498	1/1:0,27:33:63.11:1980,63,0	0/0:21,0:21:51.17:0,51,1278	0/0:40,0:40:99:0,114,2516	0/0:24,0:24:69.21:0,69,1554	1/1:0,18:21:60.07:1617,60,0	0/1:30,0:30:8.26:419,0,8	1/1:1,1:4:4.57:121,5,0
chr10	87902606	.	A	AT	210.41	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=2.264;DP=184;FS=7.027;HRun=0;HaplotypeScore=37.2223;InbreedingCoeff=0.3275;MQ=75.18;MQ0=9;MQRankSum=-1.217;QD=17.53;ReadPosRankSum=1.342;VQSLOD=4.9818;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,6:10:27.04:301,27,0	0/0:2,0:2:3:0,3,28	0/0:44,0:19:13.03:0,13,186	0/0:43,0:14:15.22:0,15,104	0/0:2,0:2:5.89:0,6,57	0/0:5,0:4:8.93:0,9,66	0/0:1,0:1:2.97:0,3,20	0/0:12,0:12:23.85:0,24,309	0/0:2,0:2:6.01:0,6,66	0/0:2,0:2:6.01:0,6,68	0/0:4,0:4:11.98:0,12,113	0/0:3,0:3:5.94:0,6,41	0/0:1,0:1:0:0,0,0	./.	0/0:2,0:2:6.02:0,6,84	0/0:4,0:4:9.02:0,9,111	0/0:14,0:14:31.27:0,31,338	0/0:4,0:4:11.87:0,12,80	0/0:7,0:7:19.76:0,20,108	1/1:2,0:2:0.46:1,0,0	0/0:1,0:1:3.01:0,3,41	0/0:1,0:1:2.97:0,3,20	0/0:2,0:2:2.90:0,3,16	./.	0/0:1,0:1:3:0,3,28	0/0:5,0:4:8.87:0,9,59	0/0:8,0:8:18.43:0,18,89	0/0:1,0:1:3:0,3,26
chr10	87902610	.	A	AT	689.39	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=-0.818;DP=189;FS=4.467;HRun=0;HaplotypeScore=35.6242;InbreedingCoeff=0.5293;MQ=77.71;MQ0=9;MQRankSum=-1.709;QD=25.53;ReadPosRankSum=2.144;VQSLOD=4.5652;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:27.04:290,27,0	0/0:2,0:2:3:0,3,27	0/0:43,0:18:32.74:0,33,226	0/0:43,0:15:18.93:0,19,116	0/0:4,0:4:6.90:0,7,71	0/0:5,0:4:8.92:0,9,68	0/0:1,0:1:2.92:0,3,17	0/0:17,0:17:41.33:0,41,477	0/0:2,0:2:6.01:0,6,68	0/0:1,0:1:3.01:0,3,39	0/0:4,0:4:12.01:0,12,117	0/0:2,0:2:5.89:0,6,37	0/0:1,0:1:3:0,3,25	./.	0/0:2,0:2:6.02:0,6,83	0/0:3,0:3:9.02:0,9,111	0/0:16,0:16:40.28:0,40,420	0/0:4,0:4:11.70:0,12,67	1/1:1,8:9:24.01:262,24,0	1/1:0,1:1:3.01:39,3,0	0/0:1,0:1:3.01:0,3,41	0/0:1,0:1:1.25:0,1,3	0/0:2,0:2:0:0,0,0	./.	0/0:1,0:1:3:0,3,28	0/0:4,0:3:8.86:0,9,56	1/1:1,6:7:18.04:236,18,0	0/0:1,0:1:3:0,3,26
chr10	87902613	.	AT	A	314.31	PASS	AB=0.956;AC=12;AF=0.231;AN=52;BaseQRankSum=2.100;DP=196;FS=3.207;HRun=1;HaplotypeScore=37.9231;InbreedingCoeff=0.3130;MQ=76.34;MQ0=9;MQRankSum=1.624;QD=2.71;ReadPosRankSum=0.425;VQSLOD=-0.5892;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:30.07:0,30,203	1/1:0,2:2:5.98:61,6,0	0/1:36,1:15:2.50:3,0,54	0/1:38,1:14:8.59:9,0,30	0/0:4,0:4:11.99:0,12,109	0/1:6,1:6:7.44:7,0,70	0/0:1,0:1:2.84:0,3,14	0/0:17,0:17:47.95:0,48,470	0/0:4,0:4:11.60:0,12,96	1/1:1,0:1:1.55:4,2,0	1/1:3,1:4:10.21:90,10,0	0/0:4,0:4:10.42:0,10,67	0/0:1,0:1:2.99:0,3,24	./.	0/0:2,0:2:6.02:0,6,74	0/0:4,0:4:12.02:0,12,134	1/1:18,1:19:37.97:268,38,0	0/0:5,0:5:14.26:0,14,76	0/0:10,0:10:24.52:0,25,211	0/0:1,0:1:2.98:0,3,22	0/0:1,0:1:2.99:0,3,24	0/0:1,0:1:2.84:0,3,14	0/0:2,0:2:2.74:0,3,12	./.	0/0:3,0:3:8.87:0,9,65	0/1:4,0:4:9.46:9,0,36	0/0:7,0:7:20.91:0,21,171	0/0:1,0:1:2.99:0,3,24
chr10	87902656	.	G	GA	304.54	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=2.614;DP=314;FS=1.299;HRun=9;HaplotypeScore=59.9647;InbreedingCoeff=0.4886;MQ=99.66;MQ0=3;MQRankSum=0.150;QD=5.97;ReadPosRankSum=0.453;VQSLOD=0.5321;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:15:36.10:398,36,0	0/0:7,0:7:21:0,21,182	0/0:36,1:26:4.24:0,4,230	0/1:34,0:22:3.04:3,0,184	0/0:9,0:9:26.99:0,27,234	0/0:13,0:12:29.98:0,30,260	0/0:3,0:3:9:0,9,78	0/0:24,0:25:50.01:0,50,420	0/0:14,0:14:38.98:0,39,339	0/0:7,0:7:18:0,18,156	0/0:9,0:9:23.99:0,24,208	0/0:8,0:8:23.98:0,24,205	0/0:5,0:5:12:0,12,104	0/0:5,0:5:15:0,15,130	0/0:4,0:4:5.98:0,6,52	0/0:7,0:7:20.98:0,21,179	0/0:22,0:22:56.98:0,57,495	0/0:6,0:6:18:0,18,156	0/0:13,0:13:32.97:0,33,281	0/0:5,0:5:12:0,12,104	0/0:5,0:5:11.99:0,12,104	0/0:10,0:10:26.98:0,27,234	0/0:6,0:6:14.99:0,15,130	0/0:3,0:3:5.99:0,6,52	0/0:5,0:5:15:0,15,130	0/0:10,0:10:26.98:0,27,234	0/0:20,0:20:59.99:0,60,521	0/0:5,0:5:15:0,15,130
chr10	87903841	.	C	CA	7390.14	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-10.549;DP=587;FS=0.729;HRun=1;HaplotypeScore=55.8225;InbreedingCoeff=0.9891;MQ=73.95;MQ0=0;MQRankSum=0.949;QD=38.29;ReadPosRankSum=0.109;VQSLOD=5.0517;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1363	0/0:6,0:6:17.97:0,18,211	0/0:13,0:13:38.96:0,39,435	0/0:9,0:9:8.98:0,9,234	0/0:15,0:15:36.10:0,36,452	1/1:0,18:18:39.13:584,39,0	1/1:1,28:29:75.25:1123,75,0	0/0:31,0:30:87.16:0,87,1041	0/0:19,0:19:57.18:0,57,727	0/0:23,0:23:66.20:0,66,844	0/0:10,0:10:27.09:0,27,350	1/1:0,19:19:45.15:673,45,0	0/0:27,0:27:78.25:0,78,1006	1/1:0,20:20:48.16:708,48,0	0/0:12,0:12:30.10:0,30,389	0/0:16,0:16:45.15:0,45,584	0/0:35,0:35:99:0,102,1286	1/1:3,30:33:93.31:1366,93,0	1/1:1,29:30:87.22:1219,87,0	1/1:0,10:10:29.84:415,30,0	0/0:45,0:45:99:0,129,1658	1/1:0,18:18:44.99:674,45,0	0/0:14,0:14:39.13:0,39,502	0/0:38,0:38:99:0,114,1457	0/0:14,0:14:42.12:0,42,531	0/0:18,0:18:45.13:0,45,555	1/1:0,16:16:42.14:629,42,0	0/0:11,0:11:33.11:0,33,427
chr10	87903988	.	A	AG	448.78	PASS	AB=0.954;AC=12;AF=0.214;AN=56;BaseQRankSum=8.776;DP=373;FS=1.621;HRun=1;HaplotypeScore=45.4463;InbreedingCoeff=0.0643;MQ=54.04;MQ0=24;MQRankSum=3.626;QD=3.18;ReadPosRankSum=1.775;VQSLOD=-0.0716;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,1:37:29.40:0,29,982	1/1:3,0:3:6.57:22,7,0	0/0:16,0:4:7.26:0,7,70	0/0:16,0:4:2.81:0,3,26	0/1:10,2:12:51.81:52,0,246	0/1:6,1:7:27.50:27,0,65	0/0:14,0:10:26.22:0,26,160	0/0:33,0:21:54.01:0,54,578	0/0:12,0:10:26.88:0,27,267	0/1:6,1:6:14.84:51,0,15	0/1:12,1:13:11.90:100,0,12	0/0:8,0:7:11.75:0,12,71	0/0:12,0:12:28.02:0,28,330	0/0:3,0:3:8.90:0,9,60	0/0:7,0:8:23.37:0,23,216	0/0:9,0:8:24.06:0,24,293	0/1:38,0:35:89.63:155,0,90	0/0:14,0:14:32.77:0,33,236	0/1:17,0:10:0.09:36,0,0	0/1:6,0:6:10.05:16,0,10	0/0:12,0:9:24.03:0,24,277	0/0:4,0:4:11.74:0,12,73	0/0:8,0:8:23.99:0,24,272	0/0:19,0:15:36.02:0,36,422	0/0:6,0:6:18.04:0,18,197	0/1:14,0:12:3.22:43,0,3	0/1:16,0:16:39.86:65,0,40	0/1:8,0:7:5.62:33,0,6
chr10	87903989	.	G	GA	2278.03	PASS	AB=0.925;AC=23;AF=0.442;AN=52;BaseQRankSum=-4.489;DP=374;FS=0.000;HRun=9;HaplotypeScore=37.8403;InbreedingCoeff=0.5910;MQ=54.01;MQ0=23;MQRankSum=0.393;QD=12.94;ReadPosRankSum=0.373;VQSLOD=2.3214;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:61.10:0,61,680	1/1:0,3:3:9.02:100,9,0	0/0:16,0:4:8.73:0,9,59	0/1:17,0:4:3.39:3,0,18	0/1:12,0:12:17.87:18,0,155	1/1:6,0:6:2.98:22,3,0	0/0:13,0:10:1.53:0,2,4	0/0:33,0:20:44.81:0,45,371	0/0:12,0:10:14.99:0,15,130	0/1:4,3:6:10.99:102,0,11	1/1:3,11:14:27.05:288,27,0	./.	0/1:11,1:12:6.24:6,0,165	./.	0/0:8,0:8:16.23:0,16,133	0/0:9,0:8:24:0,24,207	1/1:9,30:36:11.58:633,12,0	0/0:12,0:12:1.79:0,2,5	1/1:6,12:11:30.04:318,30,0	1/1:2,4:6:9.02:98,9,0	0/0:13,0:10:23.99:0,24,207	0/1:4,0:4:0:0,0,0	0/0:8,0:8:17.99:0,18,156	0/0:19,0:15:32.70:0,33,286	0/0:6,0:6:18:0,18,156	1/1:3,10:12:32.92:345,33,0	1/1:3,13:16:32.83:362,33,0	1/1:2,6:7:15.04:166,15,0
chr10	87904176	.	TA	T	569.47	PASS	AB=0.900;AC=12;AF=0.273;AN=44;BaseQRankSum=3.636;DP=272;FS=0.806;HRun=10;HaplotypeScore=59.6976;InbreedingCoeff=0.6448;MQ=73.62;MQ0=19;MQRankSum=-4.971;QD=12.65;ReadPosRankSum=0.493;VQSLOD=3.2912;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:24.03:0,24,248	1/1:0,3:3:9:78,9,0	0/0:32,2:10:13.60:0,14,94	0/0:29,0:13:13.99:0,14,98	0/0:13,0:13:30.08:0,30,329	./.	1/1:1,0:1:0.89:2,1,0	0/0:26,0:24:60.08:0,60,629	0/0:6,0:6:12.03:0,12,133	1/1:2,10:11:26.94:225,27,0	1/1:1,7:8:14.98:130,15,0	./.	0/0:5,0:5:14.87:0,15,146	./.	0/0:3,0:3:9.02:0,9,100	./.	1/1:3,10:12:29.87:260,30,0	./.	0/0:14,0:14:33.02:0,33,333	0/1:4,0:4:9.80:10,0,88	0/0:6,0:5:9.02:0,9,100	./.	0/1:3,1:4:14.01:14,0,88	0/0:9,0:7:12.03:0,12,133	0/0:8,0:8:21.04:0,21,222	0/0:15,1:15:7.07:0,7,304	0/0:10,0:10:12.75:0,13,113	0/0:21,0:20:49.08:0,49,559
chr10	87904190	.	CT	C	2281.01	PASS	AB=1.000;AC=23;AF=0.523;AN=44;BaseQRankSum=5.022;DP=336;FS=10.614;HRun=4;HaplotypeScore=62.4387;InbreedingCoeff=0.8458;MQ=80.95;MQ0=8;MQRankSum=-3.158;QD=11.29;ReadPosRankSum=2.598;VQSLOD=0.7000;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,20:24:25.04:337,25,0	1/1:4,0:4:9.98:53,10,0	0/1:55,0:21:7.85:8,0,109	0/0:39,0:15:19.89:0,20,149	0/0:11,0:11:24.70:0,25,308	./.	1/1:1,0:1:2.22:7,2,0	0/0:32,0:32:87.16:0,87,1033	0/0:7,0:7:16.87:0,17,213	1/1:15,0:14:27.51:145,28,0	1/1:11,0:11:23.34:103,23,0	./.	0/0:6,0:6:15.04:0,15,171	./.	0/0:3,0:3:9.03:0,9,116	./.	1/1:21,0:21:8.64:72,9,0	./.	1/1:0,18:18:50.70:480,51,0	1/1:5,1:6:12.74:109,13,0	0/0:7,0:7:21.01:0,21,258	./.	0/0:5,0:5:15.03:0,15,182	0/0:10,0:10:29.91:0,30,344	0/0:11,0:11:33.10:0,33,438	1/1:11,3:14:42.05:429,42,0	1/1:1,9:10:18.05:211,18,0	1/1:15,6:20:51.04:510,51,0
chr10	87904193	.	T	TA	496.88	PASS	AB=1.000;AC=9;AF=0.205;AN=44;BaseQRankSum=3.905;DP=347;FS=1.509;HRun=0;HaplotypeScore=75.8103;InbreedingCoeff=0.8537;MQ=82.31;MQ0=7;MQRankSum=-3.955;QD=9.20;ReadPosRankSum=1.883;VQSLOD=3.3874;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:31.36:0,31,121	1/1:1,3:4:8.90:72,9,0	0/0:58,0:24:42.27:0,42,280	0/0:42,0:16:16.32:0,16,176	0/0:12,0:12:33.10:0,33,434	./.	0/1:1,0:1:0:0,0,0	0/0:33,0:33:90.27:0,90,1202	0/0:7,0:7:18.06:0,18,250	1/1:6,9:14:12.80:196,13,0	1/1:6,6:12:18.38:176,18,0	./.	0/0:6,0:6:15.03:0,15,191	./.	0/0:3,0:3:9.03:0,9,125	./.	1/1:10,11:22:8.02:191,8,0	./.	0/0:19,0:19:25.50:0,26,98	0/0:6,0:6:7.66:0,8,50	0/0:7,0:7:21.06:0,21,272	./.	0/0:5,0:5:15.05:0,15,208	0/0:11,0:11:30.09:0,30,392	0/0:12,0:12:36.11:0,36,475	0/0:14,0:14:27.83:0,28,106	0/0:10,0:10:14.35:0,14,49	0/0:16,0:18:33.98:0,34,145
chr10	87904208	.	G	GA	1841.04	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-0.856;DP=399;FS=0.552;HRun=13;HaplotypeScore=64.5184;InbreedingCoeff=0.8683;MQ=69.82;MQ0=4;MQRankSum=-6.170;QD=13.74;ReadPosRankSum=1.572;VQSLOD=4.2398;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:45.06:0,45,426	0/0:4,0:4:8.11:0,8,44	0/0:45,0:19:24.87:0,25,187	0/1:33,0:11:0.16:0,0,0	0/0:13,0:13:32.94:0,33,306	1/1:1,7:8:6.02:68,6,0	1/1:1,12:13:26.23:260,26,0	0/0:26,0:26:72.09:0,72,688	0/0:9,0:9:18.01:0,18,172	0/0:17,0:17:28.05:0,28,209	0/0:15,0:15:30.62:0,31,218	1/1:0,11:11:21.06:232,21,0	0/0:7,0:7:14.85:0,15,130	1/1:0,8:8:15.03:155,15,0	0/0:5,0:5:5.97:0,6,57	0/0:2,0:2:3:0,3,29	0/0:26,0:26:17.28:0,17,144	1/1:1,11:11:24.07:281,24,0	0/0:13,0:13:33.02:0,33,317	0/0:5,0:5:8.82:0,9,86	0/0:10,0:10:21.02:0,21,202	1/1:1,10:11:24.54:265,25,0	0/0:8,0:8:8.87:0,9,86	0/0:12,0:12:21.01:0,21,202	0/0:11,0:11:24.01:0,24,223	1/1:11,4:14:30.05:315,30,0	0/0:11,0:11:24.04:0,24,229	1/1:15,6:21:44.91:461,45,0
chr10	87904636	.	C	CCACA	683.15	PASS	AB=0.879;AC=13;AF=0.241;AN=54;BaseQRankSum=-1.585;DP=610;FS=0.000;HRun=0;HaplotypeScore=112.2582;InbreedingCoeff=0.4002;MQ=59.75;MQ0=38;MQRankSum=0.060;QD=3.32;ReadPosRankSum=-2.563;VQSLOD=0.9979;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:37:1.63:0,2,26	0/1:5,0:10:13.98:14,0,22	./.	0/1:43,0:18:0:0,0,0	0/0:15,0:15:11.63:0,12,114	1/1:10,5:18:5.75:83,6,0	1/1:29,1:31:17.82:227,18,0	0/1:29,0:28:16.27:16,0,120	0/0:21,0:22:39.04:0,39,586	0/0:10,0:12:6.01:0,6,56	0/0:6,0:9:4.25:0,4,31	0/1:8,4:18:3.83:67,0,4	0/0:22,0:18:25.67:0,26,347	1/1:12,1:12:8.39:116,8,0	0/0:20,0:21:17.98:0,18,256	0/0:21,0:24:27.90:0,28,488	0/0:26,0:26:8.60:0,9,66	1/1:12,5:22:19.18:254,19,0	0/0:5,0:4:3:0,3,28	0/0:9,0:18:9.01:0,9,84	0/0:41,0:44:26.86:0,27,364	0/1:13,4:19:61.49:61,0,78	0/0:11,0:11:9.03:0,9,132	0/0:40,0:42:45.09:0,45,625	0/0:9,0:9:9.02:0,9,121	0/0:11,0:17:5.99:0,6,50	0/0:7,0:14:17.96:0,18,167	0/0:8,0:9:6.01:0,6,56
chr10	87906323	.	ATGTGTGTGTG	A	1784.41	PASS	AC=14;AF=0.292;AN=48;BaseQRankSum=5.311;DP=611;FS=27.774;HRun=0;HaplotypeScore=163.5742;InbreedingCoeff=0.8063;MQ=71.32;MQ0=11;MQRankSum=-7.224;QD=12.22;ReadPosRankSum=-0.539;VQSLOD=1.2132;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:21:0,21,265	0/0:5,0:5:6.02:0,6,154	./.	./.	0/0:15,0:15:21.04:0,21,658	1/1:11,5:16:9.03:266,9,0	1/1:21,6:28:12.04:336,12,0	0/0:20,0:18:12.27:0,12,144	0/0:17,0:19:39.11:0,39,1458	0/0:20,0:20:15.05:0,15,494	0/0:17,0:17:12.04:0,12,383	1/1:13,4:18:11.73:313,12,0	0/0:20,0:20:30.10:0,30,869	1/1:15,4:18:3.48:78,3,0	0/0:21,0:26:18.06:0,18,708	0/0:18,0:27:30.09:0,30,1075	0/0:20,0:24:18.06:0,18,557	1/1:21,7:28:18.06:521,18,0	0/0:15,0:15:5.92:0,6,98	0/0:17,0:17:21.07:0,21,871	0/0:33,0:42:30.09:0,30,1205	1/1:15,6:21:3.01:89,3,0	./.	0/0:29,0:37:48.16:0,48,1335	0/0:9,0:15:6.02:0,6,272	./.	0/0:14,0:12:6.02:0,6,147	1/1:8,0:16:15.05:349,15,0
chr10	87907049	.	G	GGGTGTA	13323.15	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-5.346;DP=357;FS=28.904;HRun=0;HaplotypeScore=73.6726;InbreedingCoeff=0.9586;MQ=99.17;MQ0=0;MQRankSum=-14.285;QD=70.12;ReadPosRankSum=0.586;VQSLOD=2.9508;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,17:26:60.21:1982,60,0	1/1:2,0:4:9.03:252,9,0	0/0:25,0:25:50.33:0,50,1172	0/0:20,0:20:54.15:0,54,1077	0/0:5,0:5:15.05:0,15,355	1/1:2,9:11:27.09:925,27,0	1/1:10,12:25:57.20:1940,57,0	0/0:9,0:9:24.07:0,24,522	0/0:15,0:15:39.13:0,39,878	1/1:5,0:7:12.03:285,12,0	1/1:4,0:12:24.08:515,24,0	1/1:3,13:16:39.13:1355,39,0	0/0:12,0:12:36.12:0,36,851	1/1:4,7:13:24.08:714,24,0	0/0:18,0:18:51.18:0,51,1174	0/0:6,0:6:18.06:0,18,407	1/1:5,0:12:15.05:405,15,0	1/1:7,5:13:30.10:1032,30,0	1/1:5,6:11:30.10:930,30,0	1/1:1,6:8:9.03:320,9,0	0/0:25,0:25:66.22:0,66,1487	1/1:4,4:9:18.06:595,18,0	0/0:4,0:4:9.03:0,9,213	0/0:17,0:17:42.14:0,42,993	0/0:11,0:11:33.09:0,33,690	1/1:2,5:7:21.07:715,21,0	1/1:1,9:11:27.09:959,27,0	1/1:2,2:4:12.04:397,12,0
chr10	87907917	.	A	AGTGT	1429.51	PASS	AB=0.936;AC=14;AF=0.280;AN=50;BaseQRankSum=-0.057;DP=652;FS=7.519;HRun=0;HaplotypeScore=145.1402;InbreedingCoeff=0.4530;MQ=70.00;MQ0=17;MQRankSum=2.490;QD=6.87;ReadPosRankSum=-0.487;VQSLOD=2.3156;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:41:1.40:0,1,5	0/0:2,0:5:6.01:0,6,55	./.	./.	0/0:14,0:14:15.05:0,15,233	1/1:25,0:25:20.52:326,21,0	0/1:38,0:38:18.96:205,0,19	0/0:26,0:23:3.47:0,3,45	0/0:11,0:11:12.03:0,12,153	0/0:30,0:30:13.87:0,14,116	./.	0/0:9,9:22:1.37:0,1,6	0/0:15,0:15:21.03:0,21,296	1/1:26,0:25:14.83:182,15,0	0/0:17,0:17:24.07:0,24,354	0/0:15,0:18:8.40:0,8,267	0/0:31,0:30:6.35:0,6,44	0/1:17,5:25:19.02:73,0,19	1/1:24,0:24:12:161,12,0	1/1:14,0:12:12.04:274,12,0	0/0:41,0:39:36.10:0,36,496	0/1:18,0:18:31.90:147,0,32	0/1:23,0:23:0.98:1,0,198	0/0:31,0:31:54.09:0,54,760	0/0:17,0:17:18.04:0,18,237	0/0:20,0:20:0:0,0,0	1/1:14,0:14:11.82:221,12,0	0/0:2,0:1:3:0,3,28
chr10	87907949	.	TGTGTGTGTGTAG	T	1700.52	PASS	AB=0.860;AC=13;AF=0.241;AN=54;BaseQRankSum=6.556;DP=652;FS=1.348;HRun=0;HaplotypeScore=183.7222;InbreedingCoeff=0.6460;MQ=50.97;MQ0=34;MQRankSum=1.273;QD=10.63;ReadPosRankSum=-0.331;VQSLOD=2.7951;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,26:44:15.74:110,0,16	1/1:10,0:10:17.82:281,18,0	0/1:15,0:4:2.96:3,0,83	0/0:20,0:4:10.85:0,11,217	0/0:22,0:22:42.14:0,42,1589	0/0:21,0:21:54.66:0,55,1836	0/0:37,0:35:7.76:0,8,2374	0/0:29,0:25:32.10:0,32,1485	0/0:14,0:14:36.12:0,36,1214	1/1:8,20:27:23.31:719,23,0	./.	0/0:22,0:22:7.26:0,7,151	0/0:16,0:15:39.60:0,40,1760	0/0:28,0:27:57.20:0,57,1991	0/0:24,0:24:56.86:0,57,2105	0/0:26,0:26:48.88:0,49,2048	1/1:10,14:21:9.03:291,9,0	0/0:26,0:25:45.11:0,45,1237	0/0:20,0:17:37.91:0,38,1253	0/0:20,0:17:36.12:0,36,1282	0/0:48,0:44:90.26:0,90,3492	0/0:18,0:17:36.08:0,36,1364	0/0:23,0:23:51.16:0,51,1983	0/0:41,0:41:99:0,105,4045	0/0:22,0:21:39.13:0,39,1637	1/1:3,13:16:17.85:336,18,0	0/1:16,0:15:9.48:9,0,801	1/1:1,3:3:3.01:118,3,0
chr10	87907959	.	TAG	T	876.71	PASS	AB=0.945;AC=19;AF=0.352;AN=54;BaseQRankSum=6.073;DP=608;FS=5.603;HRun=0;HaplotypeScore=97.8062;InbreedingCoeff=0.1561;MQ=53.67;MQ0=32;MQRankSum=1.640;QD=2.56;ReadPosRankSum=-1.132;VQSLOD=1.4967;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:40:2.80:29,3,0	1/1:10,1:11:14.83:157,15,0	0/1:16,0:10:10.63:11,0,199	0/0:17,0:7:15.90:0,16,209	0/0:22,0:22:30.08:0,30,405	0/0:20,0:20:3.63:0,4,475	0/1:33,0:32:20.71:21,0,622	0/1:24,3:23:32.12:32,0,281	0/0:12,0:12:17.90:0,18,260	1/1:28,0:27:23.68:370,24,0	./.	0/1:22,0:23:20.92:21,0,169	0/0:16,0:15:23.92:0,24,359	0/0:20,0:21:36.03:0,36,484	0/0:25,0:25:44.81:0,45,635	0/0:23,0:23:5.87:0,6,539	1/1:23,0:20:3:28,3,0	0/0:24,0:23:7.54:0,8,513	0/0:13,0:10:15.05:0,15,230	0/1:18,0:17:5.73:6,0,371	0/1:45,0:42:32.08:32,0,560	0/0:17,0:17:30.36:0,30,410	0/0:17,0:18:12.97:0,13,354	0/1:35,4:39:6.53:7,0,789	0/0:21,0:20:30.10:0,30,457	0/1:17,0:17:8.94:277,0,9	0/1:10,1:13:24.14:24,0,91	1/1:4,0:3:3:28,3,0
chr10	87912387	.	A	AGT	18497.70	PASS	AB=0.597;AC=27;AF=0.482;AN=56;BaseQRankSum=-2.874;DP=1225;FS=22.856;HRun=0;HaplotypeScore=210.2922;InbreedingCoeff=0.6710;MQ=58.74;MQ0=17;MQRankSum=0.419;QD=29.50;ReadPosRankSum=4.461;VQSLOD=4.1285;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,38:54:5.18:1080,5,0	1/1:1,12:13:26.56:466,27,0	0/0:41,0:16:29.78:0,30,373	0/0:62,0:30:47.04:0,47,490	0/0:36,0:36:81.24:0,81,1044	1/1:1,23:25:45.15:779,45,0	0/1:25,32:53:66.70:1551,0,67	0/0:53,0:52:99:0,117,1460	0/0:35,0:36:75.60:0,76,1244	0/1:13,37:52:61.11:1607,0,61	1/1:6,21:28:47.80:827,48,0	1/1:7,54:60:84.56:2130,85,0	0/0:40,0:40:99:0,105,1290	1/1:12,44:56:37.03:1396,37,0	0/0:50,0:50:99:0,132,1628	0/0:43,0:43:99:0,117,1465	0/1:11,36:47:4.46:1395,0,4	0/1:15,16:31:65.93:1041,0,66	1/1:6,20:21:48.19:799,48,0	1/1:9,32:41:74.42:1486,74,0	0/0:112,0:111:99:0,283,3666	1/1:10,38:47:11.50:1226,11,0	0/0:28,0:28:78.22:0,78,991	0/0:58,0:58:99:0,129,1815	0/0:35,0:35:87.24:0,87,1123	0/1:8,40:47:0.41:1476,0,0	1/1:9,11:20:13.63:669,14,0	1/1:3,12:15:33.11:571,33,0
chr10	87912455	.	TGA	T	586.99	PASS	AB=0.980;AC=6;AF=0.107;AN=56;BaseQRankSum=8.134;DP=1019;FS=18.018;HRun=0;HaplotypeScore=263.1624;InbreedingCoeff=0.3826;MQ=50.87;MQ0=23;MQRankSum=-4.765;QD=4.52;ReadPosRankSum=1.324;VQSLOD=0.7619;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:45.14:0,45,828	0/0:7,0:7:13.34:0,13,184	0/1:37,0:4:2.17:23,0,2	0/0:57,0:11:5.45:0,5,168	0/0:16,0:16:41.99:0,42,651	0/0:33,0:33:73.89:0,74,1199	0/0:27,0:23:58.18:0,58,760	0/0:45,0:45:99:0,120,1911	0/0:53,0:53:99:0,150,2644	0/0:50,1:50:44.73:0,45,1938	0/0:15,0:15:33.09:0,33,541	0/0:58,0:57:99:0,128,1943	0/0:32,0:32:87.62:0,88,1385	0/0:46,0:46:85.50:0,86,1333	0/0:45,0:45:99:0,120,1941	0/0:47,0:47:99:0,123,2195	0/0:30,0:30:69.25:0,69,1113	0/1:22,1:23:0.25:0,0,836	0/1:21,0:17:84.41:84,0,113	0/1:25,1:25:18.71:165,0,19	0/0:119,0:117:99:0,302,5326	0/0:26,0:26:44.41:0,44,619	0/0:24,0:23:69.22:0,69,1261	0/0:57,0:57:99:0,151,2474	0/0:29,0:28:78.22:0,78,1328	0/0:28,0:27:62.03:0,62,1153	1/1:21,2:23:53.54:437,54,0	0/0:14,0:14:39.03:0,39,603
chr10	87912457	.	AGT	A	1432.41	PASS	AB=0.957;AC=7;AF=0.125;AN=56;BaseQRankSum=7.658;DP=1013;FS=15.222;HRun=0;HaplotypeScore=260.4413;InbreedingCoeff=0.8076;MQ=50.68;MQ0=24;MQRankSum=-3.998;QD=16.09;ReadPosRankSum=0.681;VQSLOD=2.3187;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:44.82:0,45,724	0/0:7,0:7:11.53:0,12,159	0/0:39,0:4:8.13:0,8,71	0/0:55,0:11:16.23:0,16,199	0/0:17,0:17:39.08:0,39,564	0/0:34,0:34:78.91:0,79,1092	0/0:25,0:21:49.14:0,49,594	0/0:43,0:43:99:0,102,1620	0/0:53,0:53:99:0,144,2275	0/0:51,0:50:66.26:0,66,1627	0/0:12,0:12:27.07:0,27,407	0/0:57,0:56:99:0,107,1575	0/0:34,0:34:86.32:0,86,1313	0/0:46,0:46:73.48:0,73,1052	0/0:45,0:45:96.18:0,96,1473	0/0:46,0:46:99:0,123,1928	0/0:28,0:28:56.57:0,57,835	0/1:21,1:22:15.48:15,0,699	1/1:13,7:17:21.06:259,21,0	1/1:10,14:23:49.86:567,50,0	0/0:119,0:120:99:0,290,4404	0/0:24,0:24:34.86:0,35,414	0/0:24,0:23:66.19:0,66,1057	0/0:59,0:59:99:0,138,2045	0/0:29,0:28:66.18:0,66,1038	0/0:29,0:28:63.04:0,63,1011	1/1:6,17:23:43.84:738,44,0	0/0:14,0:14:33.11:0,33,545
chr10	87912481	.	T	TGTGTGTGA	19370.79	PASS	AB=0.929;AC=31;AF=0.554;AN=56;BaseQRankSum=12.468;DP=970;FS=0.000;HRun=0;HaplotypeScore=320.5370;InbreedingCoeff=0.9535;MQ=49.79;MQ0=20;MQRankSum=-14.045;QD=44.12;ReadPosRankSum=-4.626;VQSLOD=3.1863;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,5:35:54.66:1271,55,0	1/1:6,0:6:5.67:117,6,0	0/0:42,0:10:15.14:0,15,440	0/0:61,0:19:33.04:0,33,660	0/0:13,0:13:30.10:0,30,754	1/1:34,0:34:72.72:2221,73,0	1/1:32,0:26:33.62:925,34,0	0/0:47,0:47:87.24:0,87,1816	0/0:58,0:58:99:0,138,3148	1/1:38,5:42:92.94:2420,93,0	0/1:12,1:13:0:0,0,0	1/1:51,0:51:80.22:2165,80,0	0/0:34,0:34:78.27:0,78,1913	1/1:48,0:48:80.53:2304,81,0	0/0:38,0:38:68.91:0,69,1674	0/0:40,0:40:99:0,102,2525	1/1:24,1:25:12.65:640,13,0	1/1:27,1:28:46.01:1218,46,0	1/1:11,0:9:27.08:760,27,0	1/1:19,0:19:27.08:668,27,0	0/0:105,0:103:99:0,200,5409	1/1:22,1:23:20.94:578,21,0	0/0:19,0:19:45.14:0,45,1019	0/0:54,0:54:99:0,115,2794	0/0:18,0:18:42.14:0,42,912	1/1:23,2:23:36.12:1080,36,0	1/1:28,0:28:66.17:1756,66,0	1/1:8,7:15:39.13:1246,39,0
chr10	87912498	.	GCT	G	4621.68	PASS	AB=0.803;AC=18;AF=0.321;AN=56;BaseQRankSum=16.987;DP=912;FS=15.063;HRun=0;HaplotypeScore=274.1624;InbreedingCoeff=-0.1573;MQ=49.24;MQ0=13;MQRankSum=-14.390;QD=10.93;ReadPosRankSum=-3.156;VQSLOD=3.0318;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,10:35:99:302,0,407	0/1:6,3:9:3.18:14,0,3	0/0:38,0:12:34:0,34,565	0/0:44,0:16:35.90:0,36,634	0/0:15,0:15:16.86:0,17,607	1/1:20,12:32:2.62:504,3,0	0/1:23,8:26:47.84:128,0,48	0/0:34,1:35:67.79:0,68,1752	0/0:54,0:54:99:0,158,2692	0/1:31,10:39:99:810,0,142	1/1:3,4:7:5.85:69,6,0	0/1:39,11:48:37.70:628,0,38	0/0:33,0:33:92.97:0,93,1610	0/1:34,9:43:58.52:513,0,59	0/0:33,0:33:92.88:0,93,1541	0/0:46,0:46:99:0,103,2478	0/1:15,9:24:7.99:215,0,8	0/1:19,8:27:68.09:357,0,68	0/1:11,4:12:99:161,0,135	0/1:14,3:17:20.95:113,0,21	0/0:100,1:99:99:0,120,4119	0/1:21,6:25:46.66:47,0,47	0/0:19,0:19:54.18:0,54,1001	0/0:51,2:53:95.80:0,96,2354	0/0:17,0:18:33.63:0,34,736	0/1:16,3:17:99:134,0,301	0/1:20,9:29:86.30:381,0,86	0/1:12,2:14:69.10:248,0,69
chr10	87912500	.	TTG	T	2135.52	PASS	AB=0.931;AC=21;AF=0.375;AN=56;BaseQRankSum=6.505;DP=913;FS=0.000;HRun=0;HaplotypeScore=284.5544;InbreedingCoeff=0.3151;MQ=49.10;MQ0=12;MQRankSum=-2.978;QD=4.54;ReadPosRankSum=-4.737;VQSLOD=1.4839;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,1:38:42.02:0,42,458	0/0:9,0:9:5.29:0,5,22	0/0:37,0:12:3:0,3,26	0/0:41,0:16:5.88:0,6,37	0/1:15,0:15:4.62:5,0,280	1/1:23,8:31:25.59:311,26,0	1/1:17,12:26:31.70:322,32,0	0/1:32,1:32:24.50:24,0,258	0/0:49,4:53:4.29:0,4,1279	0/0:40,0:41:39.79:0,40,387	0/0:6,0:7:0.47:0,0,2	1/1:41,6:46:1.48:266,1,0	0/0:32,1:33:45.57:0,46,967	0/1:36,8:44:18.65:367,0,19	0/1:29,3:33:20.29:20,0,727	0/0:46,0:47:54.37:0,54,1290	0/0:22,0:24:11.55:0,12,78	1/1:19,7:27:24.99:334,25,0	1/1:15,0:12:3.30:20,3,0	1/1:17,0:17:21.54:133,22,0	0/1:95,5:99:99:113,0,1628	1/1:20,7:26:6.13:236,6,0	0/0:18,0:18:30.07:0,30,419	0/0:51,1:54:35.30:0,35,1401	0/1:16,3:19:67.17:67,0,279	0/0:17,0:20:38.60:0,39,312	0/1:28,0:28:95.90:96,0,128	0/0:10,0:14:20.92:0,21,167
chr10	87912502	.	G	GTGAGCT	11118.41	PASS	AB=0.941;AC=20;AF=0.357;AN=56;BaseQRankSum=14.727;DP=909;FS=0.000;HRun=0;HaplotypeScore=316.7362;InbreedingCoeff=0.1022;MQ=49.08;MQ0=12;MQRankSum=-16.454;QD=26.10;ReadPosRankSum=-4.122;VQSLOD=3.2732;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:38:99:383,0,353	0/1:9,0:9:5.48:66,0,5	0/0:35,0:10:24.05:0,24,420	0/0:41,0:16:28.51:0,29,569	0/0:16,0:16:13.33:0,13,737	1/1:27,4:31:46.80:1505,47,0	1/1:30,1:26:8.45:712,8,0	0/0:32,0:31:52.58:0,53,1573	0/0:55,0:55:99:0,144,2989	0/1:42,0:40:99:1048,0,204	0/1:7,0:7:44.35:44,0,64	0/1:30,16:45:0.03:1337,0,0	0/0:33,0:33:88.39:0,88,1948	0/1:32,12:44:10.64:1450,0,11	0/0:32,0:32:84.13:0,84,1769	0/0:46,0:46:99:0,128,2864	0/1:24,0:24:61:279,0,61	0/1:24,2:26:91.15:709,0,91	0/1:15,0:12:43.64:542,0,44	1/1:17,0:17:11.74:493,12,0	0/0:101,0:99:99:0,254,5080	0/1:23,5:26:17.45:583,0,17	0/0:17,0:17:48.16:0,48,1055	0/0:57,0:57:99:0,110,2993	0/0:18,0:18:23.68:0,24,847	0/1:24,0:22:99:369,0,186	0/1:26,0:26:51.35:1041,0,51	1/1:14,0:14:5.25:557,5,0
chr10	87912504	.	G	GAGCT	8873.65	PASS	AB=0.921;AC=17;AF=0.304;AN=56;BaseQRankSum=16.106;DP=904;FS=2.142;HRun=0;HaplotypeScore=295.3767;InbreedingCoeff=-0.2188;MQ=49.00;MQ0=12;MQRankSum=-16.507;QD=20.88;ReadPosRankSum=-4.149;VQSLOD=3.1377;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:38:99:355,0,524	0/1:9,1:10:15.89:66,0,16	0/0:34,0:9:22.63:0,23,437	0/0:38,0:14:34.61:0,35,632	0/0:16,0:16:36.78:0,37,749	0/1:26,5:31:71.61:1125,0,72	0/1:28,3:25:99:470,0,207	0/0:32,0:31:92.99:0,93,1692	0/0:54,0:54:99:0,150,2943	0/1:41,1:40:99:849,0,427	0/1:7,0:7:44.26:44,0,99	0/1:40,5:43:99:1066,0,136	0/0:36,0:36:93.37:0,93,1815	0/1:33,9:42:99:919,0,265	0/0:33,0:33:87.27:0,87,1674	0/0:45,0:45:99:0,128,2614	0/1:25,0:25:99:250,0,111	0/1:22,3:25:99:450,0,238	0/1:13,3:13:90.37:504,0,90	1/1:10,7:17:28.05:593,28,0	0/0:99,0:97:99:0,253,4857	0/1:28,2:28:99:331,0,118	0/0:16,0:16:48.16:0,48,987	0/0:58,0:58:99:0,150,2924	0/0:18,0:18:44.89:0,45,808	0/1:24,0:22:99:268,0,328	0/1:18,7:26:9.21:1138,0,9	0/1:13,0:13:4.55:445,0,5
chr10	87912508	.	G	GCT	1167.18	PASS	AB=0.991;AC=14;AF=0.250;AN=56;BaseQRankSum=14.000;DP=892;FS=3.238;HRun=0;HaplotypeScore=279.8664;InbreedingCoeff=-0.1359;MQ=49.49;MQ0=13;MQRankSum=-13.470;QD=3.17;ReadPosRankSum=-9.692;VQSLOD=0.1134;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:38:61.74:62,0,303	0/1:10,0:10:17.89:18,0,60	0/0:33,0:8:18.94:0,19,322	0/0:39,0:14:23.68:0,24,398	0/0:14,0:14:39.12:0,39,588	0/1:30,0:30:99:216,0,141	0/1:29,0:24:0.67:1,0,293	0/0:29,0:28:84.24:0,84,1257	0/0:53,0:53:99:0,153,2304	0/1:41,0:39:99:130,0,664	0/0:6,0:6:6.02:0,6,69	0/1:44,0:42:99:219,0,234	0/0:37,0:37:99:0,103,1558	0/1:45,0:45:99:175,0,453	0/0:35,0:35:90.21:0,90,1332	0/0:46,0:46:99:0,132,2046	0/1:25,1:26:27.15:27,0,132	0/1:25,0:25:65.10:65,0,286	0/1:15,0:12:48.37:48,0,277	0/0:16,1:17:16.18:0,16,316	0/0:92,0:90:99:0,252,3684	0/0:27,2:27:23.37:0,23,333	0/0:17,0:17:48.14:0,48,730	0/0:59,0:59:99:0,152,2330	0/0:17,0:17:45.01:0,45,630	0/1:25,0:23:83.26:83,0,349	0/1:24,2:26:99:144,0,253	1/1:10,2:12:17.59:136,18,0
chr10	87912525	.	TGTGC	T	1508.19	PASS	AB=0.958;AC=11;AF=0.196;AN=56;BaseQRankSum=1.738;DP=869;FS=10.961;HRun=0;HaplotypeScore=279.2811;InbreedingCoeff=0.2712;MQ=51.23;MQ0=4;MQRankSum=-2.863;QD=7.90;ReadPosRankSum=-1.799;VQSLOD=0.5429;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:43:48.17:0,48,1105	0/1:9,0:9:12.91:36,0,13	0/0:19,0:7:10.61:0,11,110	0/0:23,0:13:7.24:0,7,193	0/0:17,0:17:44.97:0,45,743	0/0:27,0:27:46.27:0,46,318	0/0:35,0:30:49.21:0,49,419	0/0:22,0:21:39.92:0,40,687	0/0:52,0:52:99:0,150,2754	0/1:37,0:36:99:110,0,384	0/1:7,0:7:0.68:19,0,1	0/0:40,0:38:14.74:0,15,277	0/0:38,0:38:99:0,101,1931	0/0:45,0:45:82.07:0,82,729	0/0:31,0:31:59.84:0,60,1550	0/0:40,0:40:88.66:0,89,2373	0/1:29,0:29:28.88:123,0,29	0/0:25,0:25:17.45:0,17,292	1/1:13,0:12:22.26:174,22,0	1/1:18,3:21:44.96:597,45,0	0/0:86,0:84:99:0,126,3278	0/0:35,0:33:43.79:0,44,359	0/0:16,0:16:41.98:0,42,762	0/0:64,0:64:99:0,170,3104	0/0:18,0:18:29.82:0,30,631	0/1:29,0:27:99:176,0,249	0/1:18,13:31:51.70:393,0,52	0/1:15,0:15:38.74:39,0,180
chr10	87912527	.	TGC	T	1917.07	PASS	AB=0.996;AC=22;AF=0.393;AN=56;BaseQRankSum=9.651;DP=842;FS=5.912;HRun=0;HaplotypeScore=234.7398;InbreedingCoeff=0.2274;MQ=51.89;MQ0=4;MQRankSum=-2.976;QD=4.73;ReadPosRankSum=3.288;VQSLOD=2.5017;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:42:47.64:0,48,721	1/1:9,0:9:5.99:48,6,0	0/0:18,0:8:10.44:0,10,75	0/0:18,0:12:1.19:0,1,127	0/0:16,0:16:32.76:0,33,479	0/1:27,0:27:82.57:83,0,122	0/1:37,0:32:55.89:56,0,212	0/0:21,0:20:41.94:0,42,361	0/0:51,0:51:94.12:0,94,1620	0/1:34,0:33:8.75:285,0,9	1/1:7,0:7:8.84:58,9,0	0/1:39,0:37:59.75:114,0,60	0/0:36,1:37:49.49:0,49,1130	0/1:43,0:44:99:106,0,245	0/0:31,0:31:57.38:0,57,931	0/0:40,0:40:81.97:0,82,1346	1/1:28,0:28:25.46:183,25,0	0/1:25,1:26:99:113,0,119	1/1:15,0:14:25.09:198,25,0	1/1:19,2:21:44.77:346,45,0	0/0:84,0:82:95.37:0,95,1953	0/1:31,0:29:53:53,0,178	0/0:13,0:13:38.91:0,39,481	0/0:61,1:62:84.45:0,84,1792	0/1:18,0:18:1.09:1,0,284	0/1:27,0:25:11.19:256,0,11	1/1:28,0:28:5.86:128,6,0	0/1:14,0:14:8.58:72,0,9
chr10	87913072	.	TTGTG	T	1497.46	PASS	AB=0.812;AC=18;AF=0.375;AN=48;BaseQRankSum=3.564;DP=571;FS=5.653;HRun=0;HaplotypeScore=98.8695;InbreedingCoeff=0.5190;MQ=66.01;MQ0=7;MQRankSum=-1.437;QD=6.01;ReadPosRankSum=1.690;VQSLOD=1.3522;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:23.85:0,24,489	0/0:3,0:5:5.49:0,5,24	./.	./.	0/0:19,0:22:17.51:0,18,251	1/1:14,7:21:9.03:139,9,0	1/1:23,6:31:11.58:276,12,0	./.	0/0:16,0:16:18.01:0,18,290	0/0:13,0:16:12.63:0,13,121	./.	1/1:16,2:20:17.97:190,18,0	0/0:15,0:15:21.07:0,21,420	1/1:10,8:17:21.06:307,21,0	0/0:22,0:24:32.58:0,33,573	0/0:19,0:18:15.05:0,15,351	0/1:20,2:32:82.56:105,0,83	1/1:22,6:29:27.05:374,27,0	0/1:14,1:18:35.46:35,0,49	0/1:10,2:14:0.44:109,0,0	1/1:34,0:34:0.46:1,0,0	1/1:13,5:18:6.02:93,6,0	0/1:11,1:11:34.42:34,0,185	0/0:30,0:37:40.82:0,41,635	0/0:14,0:14:6.02:0,6,141	0/0:12,0:12:2.74:0,3,12	0/0:10,0:12:8.47:0,8,45	0/0:7,0:7:6:0,6,67
chr10	87913291	.	GC	G	5213.50	PASS	AB=0.923;AC=26;AF=0.464;AN=56;BaseQRankSum=10.366;DP=565;FS=1.908;HRun=9;HaplotypeScore=60.8032;InbreedingCoeff=0.8161;MQ=77.76;MQ0=0;MQRankSum=-2.911;QD=20.94;ReadPosRankSum=2.420;VQSLOD=5.6703;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.27:0,96,1098	1/1:0,4:4:8.99:82,9,0	0/1:12,1:13:12.59:13,0,242	0/0:17,0:17:38.25:0,38,393	0/0:13,1:14:8.64:0,9,353	1/1:3,22:25:60.03:549,60,0	1/1:2,22:24:63.03:576,63,0	0/0:28,1:29:41.85:0,42,701	0/0:18,0:18:48.14:0,48,551	1/1:1,15:16:42.01:384,42,0	1/1:4,10:15:4.46:201,4,0	1/1:4,21:25:60.03:549,60,0	0/0:16,1:17:11.63:0,12,376	1/1:1,16:17:45.02:412,45,0	0/0:21,1:22:29.70:0,30,594	0/0:18,0:18:48.13:0,48,544	1/1:2,30:32:90.05:824,90,0	1/1:2,18:20:51.03:467,51,0	0/0:14,0:14:36.11:0,36,415	0/1:10,1:11:3.40:3,0,218	0/0:51,0:51:99:0,135,1496	1/1:2,17:19:45.02:412,45,0	0/0:12,1:13:2.61:0,3,274	0/0:30,1:33:68.48:0,68,1005	0/0:16,0:16:36.57:0,37,408	1/1:1,20:21:60.03:549,60,0	0/0:18,0:18:51.15:0,51,587	1/1:0,7:7:21.01:192,21,0
chr10	87914713	.	C	CCGTTCTT	1591.82	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.094;DP=315;FS=0.959;HRun=0;HaplotypeScore=73.8640;InbreedingCoeff=0.8415;MQ=82.35;MQ0=0;MQRankSum=-6.333;QD=93.64;ReadPosRankSum=-0.417;VQSLOD=3.8971;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.25:0,72,1749	0/0:2,0:2:6.01:0,6,99	0/0:19,0:19:30.08:0,30,614	0/0:9,0:8:18.06:0,18,403	0/0:10,0:10:24.06:0,24,538	0/0:12,0:12:27.08:0,27,619	0/0:7,0:7:21.07:0,21,520	0/0:26,0:26:63.10:0,63,1407	0/0:2,0:2:3.01:0,3,74	0/0:11,0:11:24.08:0,24,594	0/0:12,0:12:30.10:0,30,741	0/0:8,0:8:24.07:0,24,545	0/0:9,0:9:27.08:0,27,594	0/0:9,0:9:27.09:0,27,664	0/0:12,0:12:36.12:0,36,891	0/0:8,0:8:21.06:0,21,467	0/0:17,0:17:48.13:0,48,1061	0/0:10,0:10:30.10:0,30,717	0/0:14,0:14:36.11:0,36,797	0/0:16,0:16:45.15:0,45,1114	0/0:12,0:12:33.09:0,33,762	0/0:11,0:11:30.10:0,30,716	0/0:12,0:12:24.08:0,24,591	0/0:9,0:9:24.07:0,24,520	0/0:9,0:9:24.07:0,24,544	1/1:4,9:13:39.13:1296,39,0	0/0:8,0:8:24.07:0,24,545	1/1:1,3:4:12.04:412,12,0
chr10	87914782	.	GT	G	1273.14	PASS	AB=0.740;AC=31;AF=0.554;AN=56;BaseQRankSum=6.577;DP=352;FS=6.620;HRun=15;HaplotypeScore=46.8477;InbreedingCoeff=0.5107;MQ=78.33;MQ0=1;MQRankSum=-1.905;QD=5.79;ReadPosRankSum=2.006;VQSLOD=1.9262;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:24,1:25:10.32:10,0,264	1/1:0,1:2:4.99:25,5,0	0/0:22,0:13:23.38:0,23,167	0/0:14,0:12:1.67:0,2,14	0/1:11,3:14:24.81:25,0,178	1/1:3,7:10:14.76:96,15,0	1/1:3,4:8:10.87:64,11,0	0/0:18,0:18:23.99:0,24,208	0/1:2,2:4:10.27:10,0,44	1/1:2,0:8:14.03:40,14,0	1/1:6,0:14:10.08:29,10,0	0/1:2,4:7:9.51:66,0,10	0/0:9,0:10:26.71:0,27,213	1/1:5,5:12:21.75:126,22,0	0/0:10,2:12:1.73:0,2,139	0/0:10,0:11:13.52:0,14,225	1/1:0,0:16:32.59:94,33,0	1/1:2,10:13:25.63:157,26,0	1/1:1,15:18:48.40:299,48,0	0/1:6,6:12:11.82:62,0,12	0/0:9,1:11:4.44:0,4,141	1/1:7,7:14:17.57:111,18,0	0/0:14,0:14:26.97:0,27,231	0/0:4,0:5:11.84:0,12,93	0/0:12,1:14:3.69:0,4,173	1/1:7,0:26:39.54:124,40,0	1/1:3,4:10:17.93:94,18,0	1/1:0,0:7:12.22:35,12,0
chr10	87915434	.	CCTCTCT	C	1291.33	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=5.771;DP=577;FS=2.906;HRun=0;HaplotypeScore=120.4543;InbreedingCoeff=0.8059;MQ=70.20;MQ0=13;MQRankSum=-5.861;QD=10.76;ReadPosRankSum=1.046;VQSLOD=2.7664;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:28:27.47:0,27,583	1/1:5,0:6:6.02:104,6,0	0/0:41,0:16:15.05:0,15,390	0/0:50,0:28:30:0,30,796	0/0:16,0:16:15.05:0,15,437	0/0:28,0:26:15.05:0,15,333	0/0:29,0:27:18.06:0,18,428	0/0:28,0:29:35.21:0,35,723	0/0:16,0:19:21.07:0,21,554	1/1:4,4:8:9.03:164,9,0	1/1:3,2:5:3.01:62,3,0	0/0:30,0:28:5.89:0,6,156	0/0:7,0:7:18.06:0,18,532	0/0:21,0:21:5.31:0,5,91	0/0:23,0:26:35.33:0,35,1028	0/0:15,0:16:18.53:0,19,428	1/1:15,15:31:27.09:540,27,0	0/0:12,0:15:18.06:0,18,453	1/1:13,0:17:7.53:89,8,0	1/1:8,0:11:9.03:126,9,0	0/0:27,0:27:36.12:0,36,909	0/0:24,0:24:5.61:0,6,137	0/0:4,0:4:6.02:0,6,145	0/0:24,0:26:60.19:0,60,1679	0/0:17,0:17:21.07:0,21,656	1/1:14,0:19:14.96:184,15,0	1/1:9,0:16:12.04:168,12,0	1/1:5,0:6:3.01:42,3,0
chr10	87917173	.	CTG	C	4542.40	PASS	AB=0.884;AC=21;AF=0.375;AN=56;BaseQRankSum=3.310;DP=838;FS=1.201;HRun=0;HaplotypeScore=133.3377;InbreedingCoeff=0.5534;MQ=66.68;MQ0=6;MQRankSum=1.530;QD=10.12;ReadPosRankSum=3.852;VQSLOD=4.5795;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,28:62:59.94:870,60,0	0/0:4,0:10:11.99:0,12,104	1/1:27,0:15:2.75:14,3,0	0/0:34,0:23:12.09:0,12,134	0/1:16,2:19:38.30:38,0,468	1/1:5,16:23:47.81:513,48,0	1/1:16,24:41:29.45:604,29,0	0/0:26,0:26:36.10:0,36,516	0/0:28,0:29:52.04:0,52,937	0/0:14,0:33:56.81:0,57,535	0/0:6,0:17:27.87:0,28,242	1/1:14,24:40:65.86:721,66,0	0/0:35,0:35:36.44:0,36,805	1/1:10,28:39:31.43:798,31,0	0/1:25,6:33:99:130,0,789	0/1:27,1:31:4.93:5,0,794	0/0:13,0:35:50.89:0,51,459	1/1:14,15:30:38.95:430,39,0	0/0:19,0:21:23.98:0,24,215	0/0:8,0:13:13.71:0,14,101	0/1:60,3:63:15.42:15,0,1300	1/1:6,12:19:35.94:395,36,0	0/0:16,2:18:1.34:0,1,478	0/0:48,1:48:64.24:0,64,1362	0/1:17,1:20:9.74:10,0,386	0/0:14,0:32:55.58:0,56,464	0/0:11,0:27:27.47:0,27,238	0/0:3,0:6:2.50:0,2,9
chr10	87918908	.	A	AT	19680.94	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-17.391;DP=808;FS=0.820;HRun=0;HaplotypeScore=69.5751;InbreedingCoeff=0.9997;MQ=83.31;MQ0=0;MQRankSum=-3.419;QD=43.54;ReadPosRankSum=3.840;VQSLOD=5.3804;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:90.31:1434,90,0	1/1:0,11:12:33.11:514,33,0	0/0:23,0:23:69.15:0,69,864	0/0:26,0:26:69.03:0,69,817	0/0:36,0:36:99:0,108,1508	1/1:0,27:27:75.26:1197,75,0	1/1:0,27:27:72.25:1149,72,0	0/0:35,0:35:99:0,105,1412	0/0:34,0:34:99:0,102,1406	1/1:0,45:45:99:2056,135,0	1/1:0,25:25:69.24:1098,69,0	1/1:1,31:32:81.28:1292,81,0	0/0:30,0:30:90.28:0,90,1217	1/1:0,35:35:93.32:1485,93,0	0/0:26,0:26:78.21:0,78,1011	0/0:29,0:29:87.27:0,87,1185	1/1:0,20:20:60.20:951,60,0	1/1:0,25:25:66.23:1054,66,0	1/1:1,18:19:54.14:773,54,0	1/1:0,32:33:96.31:1507,96,0	0/0:34,0:34:96.30:0,96,1323	1/1:0,29:29:84.20:1308,84,0	0/0:28,0:28:84.28:0,84,1172	0/0:22,0:22:66.17:0,66,852	0/0:33,0:33:96.28:0,96,1318	1/1:0,34:33:99:1628,102,0	1/1:0,43:44:99:1852,117,0	1/1:0,8:8:24.08:383,24,0
chr10	87923069	.	AT	A	2196.88	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-2.539;DP=390;FS=0.936;HRun=11;HaplotypeScore=67.4585;InbreedingCoeff=0.9121;MQ=64.88;MQ0=8;MQRankSum=-0.484;QD=10.72;ReadPosRankSum=-0.393;VQSLOD=2.9066;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.13:0,51,541	1/1:3,1:12:18.91:71,19,0	0/0:13,0:7:7.98:0,8,54	0/0:6,0:5:2.87:0,3,31	1/1:2,15:17:46.98:375,47,0	0/0:12,0:12:30.12:0,30,126	0/0:7,0:7:13.72:0,14,58	1/1:14,22:34:49.78:509,50,0	1/1:1,8:9:23.97:197,24,0	1/1:5,1:22:29.75:104,30,0	1/1:2,0:9:8.15:24,8,0	0/0:12,0:12:28.11:0,28,124	1/1:1,4:5:11.99:99,12,0	0/0:5,0:5:8.17:0,8,35	1/1:3,8:11:17.97:148,18,0	1/1:4,4:7:8.98:74,9,0	1/1:9,0:34:45.31:130,45,0	0/0:17,0:17:30.35:0,30,135	0/0:11,0:11:22.52:0,23,115	0/0:12,0:12:32.29:0,32,211	1/1:3,4:5:11.99:99,12,0	0/0:10,0:9:9.33:0,9,43	1/1:1,5:6:11.97:99,12,0	1/1:0,8:8:20.98:172,21,0	1/1:1,16:17:38.95:320,39,0	0/0:8,0:27:54.05:0,54,307	0/0:19,0:18:46.28:0,46,264	0/0:5,0:13:31.70:0,32,186
chr10	87923070	.	T	TA	1718.16	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-8.430;DP=398;FS=6.428;HRun=1;HaplotypeScore=74.8501;InbreedingCoeff=0.8988;MQ=64.32;MQ0=8;MQRankSum=1.457;QD=25.64;ReadPosRankSum=2.447;VQSLOD=3.3875;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.13:0,57,732	0/0:13,0:12:35.67:0,36,254	0/0:13,0:7:0.14:0,0,27	0/0:6,0:5:7.89:0,8,71	0/0:19,0:18:42.16:0,42,271	1/1:0,12:12:33.11:447,33,0	1/1:1,7:8:15.04:204,15,0	0/0:37,0:35:94.69:0,95,688	0/0:9,0:9:21.59:0,22,151	0/0:23,0:22:62.06:0,62,454	0/0:9,0:9:14.89:0,15,109	1/1:2,12:14:31.92:437,32,0	0/0:5,0:5:11.77:0,12,73	1/1:1,4:5:9.02:123,9,0	0/0:13,0:13:26.63:0,27,184	0/0:8,0:7:17.70:0,18,134	0/0:34,0:33:80.16:0,80,561	1/1:2,15:17:27.57:404,28,0	0/0:11,0:11:30.01:0,30,353	0/0:12,0:12:33.11:0,33,453	0/0:6,0:4:11.77:0,12,73	1/1:2,9:10:21.06:285,21,0	0/0:7,0:7:17.68:0,18,111	0/0:9,0:9:20.59:0,21,128	0/0:18,0:18:41.23:0,41,260	0/0:28,0:26:55.25:0,55,373	0/0:19,0:18:51.16:0,51,670	0/0:13,0:13:35.22:0,35,214
chr10	87923375	.	TC	T	265.66	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.711;DP=667;FS=1.869;HRun=1;HaplotypeScore=98.8409;InbreedingCoeff=0.9904;MQ=88.80;MQ0=0;MQRankSum=-6.340;QD=12.08;ReadPosRankSum=0.818;VQSLOD=2.1852;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:50.16:361,50,0	0/0:7,0:7:18.06:0,18,288	0/0:24,0:23:60.16:0,60,898	0/0:37,1:37:78.92:0,79,1344	0/0:26,0:26:66.21:0,66,1032	0/0:20,0:20:60.20:0,60,956	0/0:32,0:32:93.30:0,93,1463	0/0:24,0:24:66.22:0,66,1032	0/0:26,0:26:78.25:0,78,1224	0/0:30,0:29:81.26:0,81,1252	0/0:11,0:11:30.10:0,30,478	0/0:36,0:36:99:0,108,1719	0/0:26,0:26:75.22:0,75,1151	0/0:30,0:30:90.31:0,90,1439	0/0:36,0:36:99:0,108,1692	0/0:33,0:33:99:0,99,1535	0/0:12,0:12:36.12:0,36,573	0/0:20,0:20:60.20:0,60,959	0/0:26,0:26:78.27:0,78,1248	0/0:14,0:14:42.14:0,42,671	0/0:37,0:37:99:0,111,1692	0/0:21,0:21:60.20:0,60,957	0/0:18,0:18:51.17:0,51,813	0/0:23,0:23:69.24:0,69,1096	0/0:15,0:15:45.15:0,45,717	0/0:20,0:20:60.20:0,60,959	0/0:31,0:31:90.31:0,90,1420	0/0:9,0:9:27.09:0,27,432
chr10	87923377	.	TCCACGACGCTATCTTTTGAATA	T	2742.37	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.468;DP=667;FS=0.845;HRun=0;HaplotypeScore=384.1411;InbreedingCoeff=0.9904;MQ=86.68;MQ0=0;MQRankSum=-6.531;QD=124.65;ReadPosRankSum=1.162;VQSLOD=2.4048;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:59.52:2837,60,0	0/0:6,0:6:18.06:0,18,1865	0/0:23,0:23:69.17:0,69,3753	0/0:33,0:32:87.26:0,87,5642	0/0:27,0:27:81.28:0,81,7106	0/0:20,0:20:60.21:0,60,6036	0/0:32,0:32:96.33:0,96,8791	0/0:25,0:25:75.26:0,75,4820	0/0:25,0:25:75.26:0,75,7420	0/0:31,0:30:84.22:0,84,7470	0/0:10,0:10:30.10:0,30,2650	0/0:34,0:34:99:0,102,9420	0/0:26,0:26:75.26:0,75,6506	0/0:30,0:30:90.31:0,90,8217	0/0:36,0:36:99:0,108,9825	0/0:34,0:34:99:0,102,9847	0/0:12,0:12:36.12:0,36,3569	0/0:22,0:22:66.23:0,66,6389	0/0:28,0:28:84.29:0,84,5833	0/0:17,0:17:51.18:0,51,4784	0/0:35,0:35:99:0,105,8844	0/0:21,0:21:63.22:0,63,6502	0/0:18,0:18:54.17:0,54,4957	0/0:22,0:22:66.23:0,66,6567	0/0:16,0:16:48.16:0,48,4914	0/0:20,0:20:60.21:0,60,5606	0/0:32,0:32:96.29:0,96,7218	0/0:9,0:9:27.09:0,27,1972
chr10	87926173	.	AGGG	A	8186.62	PASS	AB=0.593;AC=25;AF=0.446;AN=56;BaseQRankSum=2.435;DP=668;FS=14.075;HRun=12;HaplotypeScore=109.1098;InbreedingCoeff=0.9403;MQ=72.76;MQ0=2;MQRankSum=-2.008;QD=26.75;ReadPosRankSum=7.587;VQSLOD=1.8724;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:25.34:0,25,235	1/1:3,6:9:17.10:208,17,0	0/0:26,0:26:12.56:0,13,703	0/0:18,0:13:14.64:0,15,170	0/0:14,0:14:33.10:0,33,551	1/1:1,13:14:39.12:493,39,0	1/1:13,35:48:96.13:1210,96,0	0/0:14,0:15:15.03:0,15,232	0/0:21,0:25:39.05:0,39,657	1/1:3,19:22:57.16:719,57,0	1/1:2,10:12:27.08:341,27,0	1/1:2,33:35:90.28:1137,90,0	0/0:21,0:23:18.06:0,18,351	1/1:4,17:21:45.10:566,45,0	0/0:20,0:20:39.11:0,39,691	0/0:20,0:21:45.13:0,45,836	1/1:5,29:34:78.22:986,78,0	1/1:4,26:30:60.16:758,60,0	0/0:5,0:13:8.89:0,9,38	0/1:5,3:16:0.84:96,0,1	0/0:43,0:44:75.18:0,75,1250	1/1:4,15:19:36.05:437,36,0	0/0:18,0:18:24.08:0,24,427	0/0:31,0:35:63.09:0,63,1098	0/0:14,0:17:27.07:0,27,436	1/1:7,23:32:72:855,72,0	0/0:5,0:25:23.67:0,24,51	1/1:1,13:14:33.02:381,33,0
chr10	87926184	.	GGA	G	714.91	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=1.092;DP=623;FS=15.588;HRun=0;HaplotypeScore=115.6044;InbreedingCoeff=0.3300;MQ=74.55;MQ0=2;MQRankSum=0.003;QD=7.53;ReadPosRankSum=3.234;VQSLOD=2.5565;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,48:50:54.09:691,54,0	0/0:9,0:9:24.14:0,24,145	0/0:29,1:28:8.10:0,8,539	0/0:19,0:14:30.89:0,31,273	0/0:13,0:13:13.57:0,14,400	0/0:16,0:16:41.84:0,42,215	0/0:41,0:41:86.14:0,86,461	0/0:16,0:16:44.64:0,45,416	0/0:19,0:19:50.64:0,51,646	0/0:22,0:22:30.34:0,30,224	0/0:13,0:13:27.71:0,28,147	0/0:36,0:36:83.46:0,83,387	0/0:16,0:16:41.98:0,42,487	0/0:19,0:19:37:0,37,185	0/0:17,0:17:46.65:0,47,645	0/0:16,0:16:48.05:0,48,774	0/0:35,0:35:83.74:0,84,430	0/0:28,0:28:47.83:0,48,214	0/1:10,0:10:22.70:33,0,23	0/1:13,0:13:20.86:21,0,80	0/0:47,0:46:99:0,105,1305	0/0:18,0:18:31.44:0,31,154	0/0:8,0:8:24.05:0,24,331	0/0:29,0:29:80.88:0,81,1146	0/0:13,0:13:32.95:0,33,362	0/0:31,0:31:45.87:0,46,300	0/1:22,0:22:18.29:93,0,18	0/0:17,0:17:41.85:0,42,235
chr10	87927218	.	G	GA	5028.64	PASS	AB=0.889;AC=21;AF=0.375;AN=56;BaseQRankSum=-13.236;DP=583;FS=6.862;HRun=9;HaplotypeScore=56.6656;InbreedingCoeff=0.9361;MQ=77.01;MQ0=0;MQRankSum=-1.296;QD=22.75;ReadPosRankSum=0.786;VQSLOD=5.6846;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:86.90:0,87,743	1/1:1,11:12:27.07:299,27,0	0/0:20,0:17:29.08:0,29,262	0/0:19,0:18:28.33:0,28,235	0/0:25,1:26:38.80:0,39,565	1/1:6,21:28:7.90:526,8,0	1/1:4,17:21:48.13:531,48,0	0/0:27,0:27:68.97:0,69,599	0/0:23,0:23:62.91:0,63,533	1/1:3,21:24:63.13:673,63,0	1/1:5,16:21:45.08:483,45,0	1/1:0,15:15:45.12:498,45,0	0/1:14,2:16:0.20:0,0,227	1/1:2,14:16:7.05:306,7,0	0/0:23,0:24:62.01:0,62,524	0/0:22,0:22:59.98:0,60,521	1/1:3,29:32:49.18:770,49,0	1/1:2,20:23:56.99:611,57,0	0/0:20,0:20:59.98:0,60,518	0/0:29,0:29:56.90:0,57,487	0/0:11,0:11:26.99:0,27,234	1/1:2,11:13:30.08:332,30,0	0/0:24,0:24:62.98:0,63,546	0/0:11,0:11:32.99:0,33,286	0/0:16,0:16:38.98:0,39,335	0/0:22,1:23:35.77:0,36,529	0/0:18,0:18:38.93:0,39,326	0/0:16,0:16:44.98:0,45,388
chr10	87928609	.	A	AC	2302.52	PASS	AB=0.634;AC=10;AF=0.179;AN=56;BaseQRankSum=-5.526;DP=497;FS=0.443;HRun=9;HaplotypeScore=56.6543;InbreedingCoeff=0.1087;MQ=74.54;MQ0=1;MQRankSum=-3.145;QD=13.31;ReadPosRankSum=-0.903;VQSLOD=3.0218;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:31:34.61:0,35,102	0/0:4,0:4:11.99:0,12,103	0/0:13,0:12:20.96:0,21,177	0/0:13,0:13:4.39:0,4,161	0/0:9,0:9:17.95:0,18,153	0/1:5,11:16:59.75:82,0,60	0/1:7,12:19:15.97:296,0,16	0/0:20,0:20:35.96:0,36,310	0/0:16,0:17:46.95:0,47,384	0/0:21,0:21:40.54:0,41,344	0/0:12,0:12:29.97:0,30,255	0/1:9,20:29:35.32:454,0,35	0/0:19,0:21:51.97:0,52,413	0/1:7,15:22:65.36:258,0,65	0/0:31,0:31:80.40:0,80,675	0/0:12,0:12:32.99:0,33,284	0/0:21,0:21:50.92:0,51,430	1/1:5,23:28:7.90:545,8,0	0/1:17,4:21:13.09:293,0,13	0/1:4,9:13:2.10:178,0,2	0/0:32,0:32:62.21:0,62,518	0/1:2,9:11:5:178,0,5	0/0:10,0:10:26.96:0,27,229	0/0:23,0:23:56.98:0,57,495	0/0:20,1:21:17.80:0,18,383	0/0:8,0:8:17.98:0,18,156	0/1:8,6:14:74.05:165,0,74	0/0:5,0:5:15:0,15,130
chr10	87932239	.	C	CGGA	3451.79	PASS	AB=0.957;AC=9;AF=0.161;AN=56;BaseQRankSum=-7.030;DP=514;FS=4.092;HRun=0;HaplotypeScore=75.9723;InbreedingCoeff=0.8739;MQ=85.18;MQ0=0;MQRankSum=-3.895;QD=37.12;ReadPosRankSum=0.786;VQSLOD=4.2803;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1843	1/1:1,8:9:24.08:513,24,0	0/0:24,0:24:42.55:0,43,918	0/0:13,0:13:35.61:0,36,557	0/0:15,0:15:42.14:0,42,700	0/0:10,0:10:30.10:0,30,499	0/0:15,0:15:33.11:0,33,549	0/0:23,0:23:51.17:0,51,844	0/0:17,0:17:48.16:0,48,799	1/1:4,6:10:21.07:447,21,0	1/1:1,12:14:30.10:613,30,0	0/0:21,0:21:51.17:0,51,849	0/0:24,0:24:66.21:0,66,1073	0/0:14,0:14:33.07:0,33,519	0/0:20,0:20:54.17:0,54,874	0/0:21,0:21:63.22:0,63,1044	1/1:4,32:37:84.03:1868,84,0	0/0:15,0:15:33.11:0,33,548	0/0:13,0:13:39.12:0,39,618	0/0:10,0:10:30.06:0,30,469	0/0:38,0:38:99:0,111,1839	0/0:15,0:15:42.14:0,42,699	0/0:10,0:10:24.08:0,24,394	0/0:22,0:22:66.23:0,66,1099	0/0:13,0:13:36.12:0,36,600	0/1:21,1:22:10.85:11,0,818	0/0:17,0:17:42.14:0,42,698	0/0:12,0:12:30.10:0,30,500
chr10	87933863	.	AC	A	220.87	PASS	AC=16;AF=0.571;AN=28;BaseQRankSum=0.858;DP=27;FS=4.771;HRun=7;HaplotypeScore=10.5831;InbreedingCoeff=0.4284;MQ=84.55;MQ0=0;MQRankSum=-0.634;QD=14.72;ReadPosRankSum=2.723;VQSLOD=1.2725;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:1:3.01:0,3,38	./.	0/0:2,0:1:4.81:0,5,29	./.	0/0:2,0:2:6.02:0,6,75	./.	1/1:1,0:1:2.88:15,3,0	0/0:1,0:1:2.97:0,3,20	0/0:1,0:1:0:0,0,0	1/1:1,0:1:2.99:23,3,0	./.	1/1:2,0:2:2.84:19,3,0	./.	1/1:1,0:1:3.01:30,3,0	./.	0/0:1,0:1:3.01:0,3,38	./.	./.	1/1:1,4:5:14.95:124,15,0	1/1:0,2:2:5.95:41,6,0	./.	1/1:1,0:1:3.01:30,3,0	./.	./.	./.	./.	1/1:0,2:2:5.91:45,6,0	./.
chr10	87934244	.	G	GCTCGTCCCCCTC	39106.66	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-1.773;DP=615;FS=1.358;HRun=0;HaplotypeScore=196.1863;InbreedingCoeff=0.9703;MQ=79.92;MQ0=0;MQRankSum=-19.072;QD=135.32;ReadPosRankSum=-0.467;VQSLOD=5.1640;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,5275	1/1:2,5:7:21.07:1309,21,0	0/0:24,0:24:62.70:0,63,2106	0/0:17,0:17:42.14:0,42,1355	0/0:11,0:11:33.11:0,33,1274	1/1:8,7:17:39.13:2327,39,0	1/1:11,6:19:42.14:2301,42,0	0/0:28,0:28:84.27:0,84,2755	0/0:24,0:24:72.23:0,72,2649	1/1:15,7:23:66.22:3684,66,0	1/1:4,1:9:3.01:187,3,0	1/1:16,17:36:99:5613,102,0	0/0:17,0:17:48.16:0,48,1778	1/1:9,15:27:75.26:4045,75,0	0/0:31,0:31:93.29:0,93,3327	0/0:24,0:24:69.24:0,69,2554	1/1:14,10:27:57.16:3233,57,0	1/1:7,11:19:48.16:2999,48,0	1/1:18,6:26:75.24:3369,75,0	1/1:9,3:14:21.07:1137,21,0	0/0:49,0:49:99:0,144,5295	1/1:7,7:15:30.10:1765,30,0	0/0:11,0:11:33.11:0,33,1223	0/0:32,0:32:96.33:0,96,3598	0/0:8,0:8:24.08:0,24,920	1/1:8,8:19:57.17:2865,57,0	1/1:14,10:27:63.22:3528,63,0	1/1:2,2:4:12.04:744,12,0
chr10	87935009	.	GTCCATCCA	G	5101.23	PASS	AB=0.640;AC=19;AF=0.365;AN=52;BaseQRankSum=8.550;DP=725;FS=6.349;HRun=0;HaplotypeScore=188.9979;InbreedingCoeff=0.8498;MQ=67.18;MQ0=2;MQRankSum=-10.497;QD=21.62;ReadPosRankSum=2.634;VQSLOD=3.9953;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:60.13:0,60,1764	1/1:5,2:7:11.97:190,12,0	./.	./.	0/0:26,0:26:57.13:0,57,1909	1/1:9,11:20:18.06:445,18,0	1/1:10,11:21:5.88:145,6,0	0/0:25,0:25:12.03:0,12,156	0/0:28,0:30:62.37:0,62,1816	1/1:11,17:28:39.01:788,39,0	1/1:7,8:15:8.99:163,9,0	1/1:8,28:36:41.90:1046,42,0	0/0:29,0:29:54.12:0,54,1778	1/1:11,22:33:32.80:791,33,0	0/0:30,0:31:66.18:0,66,2139	0/0:24,0:24:63.18:0,63,1970	1/1:14,14:28:18.06:427,18,0	0/1:7,8:16:40.78:264,0,41	0/0:17,0:17:3.01:0,3,121	0/0:14,0:23:29.83:0,30,489	0/0:49,0:47:96.22:0,96,3041	1/1:10,22:32:36.55:842,37,0	0/0:21,0:21:45.01:0,45,1010	0/0:35,0:35:72.19:0,72,2291	0/0:10,0:28:24.06:0,24,680	0/0:12,0:29:52.03:0,52,421	0/0:14,0:25:25.31:0,25,753	0/0:12,0:21:26.61:0,27,204
chr10	87937277	.	T	TA	7624.84	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-4.210;DP=485;FS=19.642;HRun=7;HaplotypeScore=56.9311;InbreedingCoeff=0.9292;MQ=78.07;MQ0=0;MQRankSum=0.262;QD=27.23;ReadPosRankSum=2.669;VQSLOD=3.3037;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:93.06:0,93,881	1/1:0,8:8:21.06:254,21,0	0/1:9,0:9:7.06:7,0,77	0/0:12,0:12:22.97:0,23,180	0/0:16,0:16:27.02:0,27,254	1/1:5,13:19:39.11:461,39,0	1/1:3,11:14:24.07:290,24,0	0/0:40,0:39:99:0,105,1011	0/0:13,0:13:33.05:0,33,319	1/1:3,16:19:48.13:568,48,0	1/1:4,22:27:63.11:742,63,0	1/1:2,17:20:42.13:507,42,0	0/0:11,0:11:33.05:0,33,317	1/1:2,12:14:30.09:362,30,0	0/0:13,0:13:36.05:0,36,348	0/0:12,0:12:36.05:0,36,342	1/1:5,26:31:69.21:834,69,0	1/1:0,24:24:66.20:797,66,0	1/1:1,17:18:51.10:578,51,0	1/1:3,10:13:33.10:396,33,0	0/0:14,0:14:33.05:0,33,318	1/1:1,3:4:8.94:89,9,0	0/0:13,0:13:33.03:0,33,313	0/0:10,0:10:21.02:0,21,197	0/0:15,0:15:33.01:0,33,307	1/1:2,24:26:72.22:869,72,0	1/1:3,20:23:45.14:544,45,0	1/1:2,9:11:27.08:326,27,0
chr10	87938918	.	GT	G	3687.68	PASS	AB=0.792;AC=30;AF=0.536;AN=56;BaseQRankSum=13.925;DP=699;FS=14.103;HRun=10;HaplotypeScore=110.4601;InbreedingCoeff=0.8658;MQ=87.14;MQ0=5;MQRankSum=-3.049;QD=11.35;ReadPosRankSum=1.798;VQSLOD=1.6031;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:25.19:57,0,25	1/1:2,10:12:32.65:231,33,0	0/0:55,1:42:48.66:0,49,516	0/0:40,1:29:31.08:0,31,409	0/0:27,0:27:75.18:0,75,817	1/1:10,21:31:63.05:551,63,0	1/1:2,24:26:53.91:458,54,0	0/0:37,3:40:24.53:0,25,737	0/0:24,0:24:72.18:0,72,787	1/1:16,12:29:29.68:314,30,0	1/1:3,12:15:41.54:304,42,0	1/1:2,14:16:17.98:155,18,0	0/0:24,0:24:60.13:0,60,641	0/1:4,10:14:6.20:175,0,6	0/0:30,1:31:64.14:0,64,901	0/0:27,2:29:52.02:0,52,770	1/1:6,12:18:35.71:258,36,0	1/1:4,15:19:20.08:246,20,0	1/1:5,0:14:20.06:69,20,0	1/1:0,0:27:43.22:158,43,0	0/0:19,0:19:54.07:0,54,563	1/1:2,17:19:20.10:285,20,0	0/0:24,0:24:66.61:0,67,700	0/0:34,1:35:67.15:0,67,935	0/0:22,0:24:65.48:0,65,645	1/1:11,4:15:25.89:150,26,0	1/1:3,0:31:38.69:118,39,0	1/1:1,7:9:20.03:161,20,0
chr10	87938928	.	TG	T	835.91	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=8.084;DP=736;FS=4.020;HRun=7;HaplotypeScore=132.0139;InbreedingCoeff=0.6330;MQ=85.63;MQ0=5;MQRankSum=-2.233;QD=4.62;ReadPosRankSum=2.961;VQSLOD=0.0728;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:28:35.02:375,35,0	1/1:12,0:12:30.09:131,30,0	0/0:59,0:45:52.99:0,53,573	0/0:40,0:28:34.37:0,34,329	0/0:31,0:31:86.41:0,86,956	0/1:27,0:27:4.78:5,0,78	0/1:28,0:28:16.20:16,0,29	0/0:38,0:38:87.03:0,87,959	0/0:31,0:31:93.20:0,93,1045	1/1:29,0:29:7.01:202,7,0	1/1:16,0:16:33.57:144,34,0	0/1:21,0:21:6.83:7,0,100	0/0:24,0:24:69.18:0,69,800	0/0:15,0:16:5.51:0,6,98	0/0:34,0:34:90.71:0,91,1055	0/0:31,0:31:84.64:0,85,940	1/1:20,0:20:30.66:131,31,0	0/0:19,0:19:10.74:0,11,71	0/0:14,0:14:31.51:0,32,186	0/0:33,0:33:37.40:0,37,324	0/0:19,0:20:53.67:0,54,561	0/0:21,0:21:5.06:0,5,71	0/0:30,0:30:77.98:0,78,841	0/0:32,0:32:81.16:0,81,945	0/0:21,0:21:57.14:0,57,667	0/0:21,0:20:9.51:0,10,174	0/0:31,0:31:48.14:0,48,341	0/0:9,0:9:2.06:0,2,33
chr10	87938935	.	GA	G	5689.16	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=13.970;DP=693;FS=17.320;HRun=1;HaplotypeScore=105.4249;InbreedingCoeff=0.9105;MQ=80.43;MQ0=4;MQRankSum=-3.419;QD=17.51;ReadPosRankSum=2.243;VQSLOD=3.9491;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:34.81:89,0,35	1/1:0,12:12:33.10:403,33,0	0/0:37,3:32:29.44:0,29,784	0/0:28,6:25:5.48:0,5,368	0/0:32,0:32:77.13:0,77,1172	1/1:26,1:27:72.75:628,73,0	1/1:27,0:27:62.15:548,62,0	0/0:35,0:35:90.47:0,90,1312	0/0:32,0:32:96.28:0,96,1305	1/1:0,27:27:75.91:868,76,0	1/1:0,14:14:39.05:462,39,0	1/1:16,1:17:32.27:293,32,0	0/0:24,0:24:72.19:0,72,952	1/1:12,1:13:26.07:240,26,0	0/0:33,0:33:99:0,99,1343	0/0:31,0:31:84.24:0,84,1131	1/1:1,23:24:39.06:451,39,0	1/1:15,1:16:34.10:273,34,0	1/1:14,0:14:25.95:131,26,0	1/1:24,2:26:40.55:187,41,0	0/0:20,0:20:56.08:0,56,676	1/1:18,0:18:34.31:361,34,0	0/0:30,0:30:84.23:0,84,1122	0/0:33,0:33:90.14:0,90,1137	0/0:24,0:24:69.06:0,69,862	1/1:22,1:22:46.68:353,47,0	1/1:26,1:27:53.17:237,53,0	1/1:10,0:10:21.26:165,21,0
chr10	87939189	.	G	GGA	6141.15	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=9.819;DP=808;FS=5.675;HRun=0;HaplotypeScore=115.9752;InbreedingCoeff=0.3939;MQ=72.45;MQ0=5;MQRankSum=0.840;QD=16.46;ReadPosRankSum=4.813;VQSLOD=4.7579;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:45:99:0,102,1317	1/1:2,6:8:12.04:199,12,0	0/0:41,0:32:24.59:0,25,388	0/0:47,0:39:16.67:0,17,404	0/0:16,0:17:47.93:0,48,530	0/1:24,0:24:42.28:295,0,42	0/1:37,0:37:99:342,0,105	0/0:34,0:34:66.14:0,66,741	0/0:37,0:37:90.17:0,90,1035	1/1:3,24:27:66.12:932,66,0	1/1:1,11:12:24.08:399,24,0	1/1:32,0:32:45.01:557,45,0	0/0:28,0:28:60.13:0,60,702	1/1:32,0:32:28.17:495,28,0	0/0:36,0:36:90.21:0,90,1067	0/0:40,0:40:99:0,105,1241	1/1:7,29:36:25.42:958,25,0	0/1:21,0:20:56.29:306,0,56	0/1:14,0:14:80.79:84,0,81	0/1:35,0:35:32.44:379,0,32	0/0:51,0:51:99:0,141,1707	0/1:28,0:28:99:273,0,113	0/0:22,0:22:66.04:0,66,804	0/0:23,0:23:66.19:0,66,817	0/0:12,0:12:33.09:0,33,403	1/1:30,1:29:23.99:463,24,0	0/1:27,0:27:23.47:375,0,23	0/1:9,0:9:30.61:82,0,31
chr10	87939200	.	G	GAC	9141.53	PASS	AB=0.911;AC=25;AF=0.446;AN=56;BaseQRankSum=-8.750;DP=833;FS=7.659;HRun=0;HaplotypeScore=113.3974;InbreedingCoeff=0.6261;MQ=72.71;MQ0=5;MQRankSum=0.930;QD=23.56;ReadPosRankSum=7.238;VQSLOD=5.1382;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,111,1321	0/1:8,0:8:24.72:84,0,25	0/0:40,0:30:49.54:0,50,496	0/0:52,0:44:6.80:0,7,449	0/0:18,0:18:47.79:0,48,550	1/1:6,16:22:42.14:694,42,0	1/1:11,29:40:51.12:816,51,0	0/0:30,0:30:72.13:0,72,786	0/0:34,0:34:84.19:0,84,989	0/1:31,0:31:99:282,0,148	0/1:14,0:14:11.74:171,0,12	1/1:4,32:38:66.07:1090,66,0	0/0:25,0:25:54:0,54,622	1/1:3,27:31:63.22:1047,63,0	0/0:35,0:35:93.16:0,93,1076	0/0:40,0:40:99:0,102,1188	0/1:36,0:36:58.86:441,0,59	1/1:5,17:21:42.14:698,42,0	1/1:9,7:16:18.02:262,18,0	1/1:7,21:28:51.17:842,51,0	0/0:60,0:60:99:0,162,1889	0/1:6,25:31:30.21:603,0,30	0/0:24,0:24:69.20:0,69,844	0/0:27,0:26:78.17:0,78,916	0/0:15,0:15:36.08:0,36,415	1/1:4,25:28:75.14:1097,75,0	1/1:6,22:28:50.89:815,51,0	1/1:3,10:13:12.04:199,12,0
chr10	87939420	.	CTCAT	C	11846.17	PASS	AB=0.941;AC=31;AF=0.554;AN=56;BaseQRankSum=17.842;DP=768;FS=4.893;HRun=0;HaplotypeScore=143.5918;InbreedingCoeff=0.9180;MQ=70.58;MQ0=0;MQRankSum=-3.415;QD=30.14;ReadPosRankSum=4.703;VQSLOD=4.2801;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,123,2904	1/1:4,8:12:24.08:388,24,0	0/0:24,0:19:16.30:0,16,362	0/0:18,0:15:9.03:0,9,215	0/0:28,0:28:54.19:0,54,1280	1/1:5,16:21:45.15:727,45,0	1/1:5,15:20:36.12:582,36,0	0/0:43,0:43:51.17:0,51,1154	0/0:35,0:35:84.27:0,84,1950	1/1:9,26:35:78.24:1232,78,0	1/1:4,9:13:27.09:436,27,0	1/1:14,30:44:84.20:1357,84,0	0/0:22,0:22:51.18:0,51,1193	1/1:11,21:32:60.20:969,60,0	0/0:29,0:29:75.26:0,75,1799	0/0:32,0:32:72.20:0,72,1592	1/1:7,19:26:48.16:772,48,0	1/1:6,13:19:36.12:582,36,0	1/1:12,10:22:30.10:484,30,0	1/1:6,19:25:57.11:862,57,0	0/0:46,0:46:96.33:0,96,2260	1/1:12,16:28:39.13:630,39,0	0/0:21,0:21:51.18:0,51,1232	0/1:15,1:16:21.38:21,0,547	0/0:21,0:21:45.15:0,45,1056	1/1:13,27:40:84.29:1350,84,0	1/1:6,16:21:41.97:678,42,0	1/1:1,17:18:48.16:775,48,0
chr10	87939910	.	G	GACAC	3700.57	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-6.784;DP=804;FS=0.482;HRun=0;HaplotypeScore=129.2634;InbreedingCoeff=0.8622;MQ=57.64;MQ0=25;MQRankSum=0.545;QD=22.29;ReadPosRankSum=2.466;VQSLOD=3.2034;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:80.74:0,81,1271	0/0:4,0:4:9.01:0,9,123	0/0:31,0:9:17.19:0,17,181	0/1:28,0:12:8.19:8,0,214	0/0:16,0:15:33.11:0,33,551	0/0:24,0:23:45.12:0,45,677	0/0:18,0:18:42.14:0,42,666	0/0:39,0:38:66.46:0,66,1141	0/0:30,0:30:66.13:0,66,937	0/0:25,0:22:38.35:0,38,682	0/0:18,0:18:33.09:0,33,514	0/0:23,0:23:60.19:0,60,945	0/0:36,0:35:69.23:0,69,1137	0/0:13,0:13:24.06:0,24,364	0/0:34,0:35:69.21:0,69,1094	0/0:24,0:24:54.18:0,54,880	0/0:38,0:38:55.09:0,55,1104	0/0:14,0:14:36.12:0,36,570	1/1:18,5:23:18.04:348,18,0	1/1:9,12:19:24.08:593,24,0	0/0:71,0:70:99:0,153,2404	0/0:26,0:26:57.16:0,57,889	0/0:32,0:30:63.22:0,63,1038	0/0:44,0:43:95.56:0,96,1615	0/0:18,0:18:45.13:0,45,704	1/1:17,17:34:6.74:1001,7,0	1/1:7,21:33:25.41:1046,25,0	1/1:7,10:20:38.07:704,38,0
chr10	87940918	.	G	GAA	1152.01	PASS	AB=0.912;AC=9;AF=0.161;AN=56;BaseQRankSum=7.179;DP=683;FS=8.899;HRun=0;HaplotypeScore=127.5623;InbreedingCoeff=0.7438;MQ=74.24;MQ0=5;MQRankSum=-4.264;QD=11.64;ReadPosRankSum=-3.137;VQSLOD=2.4172;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1836	1/1:3,3:7:17.03:175,17,0	0/0:35,0:24:49.10:0,49,651	0/0:26,0:18:3.13:0,3,295	0/0:26,0:26:78.20:0,78,1116	0/0:23,0:23:43.13:0,43,250	0/0:16,0:16:15.74:0,16,97	0/0:38,0:38:99:0,108,1562	0/0:25,0:25:72.16:0,72,1156	1/1:13,2:18:7.01:239,7,0	1/1:6,16:23:33.15:402,33,0	0/0:26,0:26:30.34:0,30,227	0/0:24,0:24:66.22:0,66,1043	0/0:30,0:30:53.73:0,54,440	0/0:31,0:31:84.26:0,84,1295	0/0:25,0:25:75.26:0,75,1207	1/1:3,15:20:39.25:475,39,0	0/0:17,0:17:48.46:0,48,335	0/0:23,0:23:5.41:0,5,367	0/1:28,2:31:18.55:19,0,272	0/0:16,0:16:48.15:0,48,748	0/0:15,0:14:23.05:0,23,200	0/0:29,0:29:81.25:0,81,1227	0/0:24,0:24:72.24:0,72,1143	0/0:28,0:28:78.17:0,78,1252	0/0:28,0:28:14.79:0,15,632	0/0:22,0:21:4.48:0,4,201	0/0:15,0:15:29.41:0,29,409
chr10	87940919	.	G	GAA	7161.19	PASS	AB=0.771;AC=30;AF=0.536;AN=56;BaseQRankSum=10.294;DP=694;FS=2.401;HRun=11;HaplotypeScore=113.2256;InbreedingCoeff=0.8381;MQ=73.23;MQ0=5;MQRankSum=-4.572;QD=20.40;ReadPosRankSum=-2.171;VQSLOD=3.7337;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:42:80.96:0,81,834	1/1:8,0:8:18:201,18,0	0/0:35,0:24:31.46:0,31,256	0/1:25,0:17:27.94:28,0,53	0/0:22,0:24:38.61:0,39,396	1/1:1,0:24:47.63:557,48,0	1/1:0,0:16:24.07:289,24,0	0/0:36,0:37:77.94:0,78,715	0/0:25,0:26:53.37:0,53,476	1/1:16,0:16:11.57:230,12,0	1/1:22,0:22:49.14:485,49,0	1/1:1,0:29:47:516,47,0	0/0:25,0:25:45.68:0,46,455	0/1:5,1:32:14.06:522,0,14	0/0:28,0:31:56.89:0,57,593	0/0:23,0:25:59.42:0,59,536	1/1:22,0:22:36.96:479,37,0	1/1:4,0:17:5.99:397,6,0	1/1:12,11:24:45.11:609,45,0	1/1:14,17:32:81.66:1078,82,0	0/0:16,0:16:26.98:0,27,312	1/1:0,1:14:33.06:371,33,0	0/0:25,0:29:39.81:0,40,494	0/0:25,0:25:63.02:0,63,608	0/0:28,0:28:70.37:0,70,690	1/1:16,10:29:49.61:616,50,0	1/1:5,16:24:46.47:516,46,0	1/1:10,5:15:21.04:267,21,0
chr10	87942150	.	AT	A	4311.67	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.151;DP=545;FS=4.813;HRun=9;HaplotypeScore=54.8797;InbreedingCoeff=0.9584;MQ=69.19;MQ0=0;MQRankSum=-1.134;QD=23.06;ReadPosRankSum=1.390;VQSLOD=5.8436;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.18:0,84,942	1/1:1,3:4:9:82,9,0	0/0:12,0:11:11.98:0,12,135	0/0:15,0:13:3.65:0,4,226	0/0:25,0:25:66.19:0,66,759	0/0:20,0:20:57.14:0,57,638	0/0:26,0:26:78.23:0,78,899	0/0:35,1:36:65.80:0,66,992	0/0:14,0:14:39.11:0,39,447	1/1:2,17:19:51.03:467,51,0	1/1:2,18:20:48.02:439,48,0	0/0:27,0:27:72.21:0,72,830	0/0:14,0:14:36.09:0,36,405	0/0:15,0:15:45.13:0,45,518	0/0:19,0:19:51.15:0,51,589	0/0:15,0:15:39.07:0,39,436	1/1:1,32:34:92.08:830,92,0	0/0:23,0:23:54.14:0,54,612	1/1:4,19:23:57.02:518,57,0	1/1:4,24:28:63.02:577,63,0	0/0:15,0:15:36.11:0,36,414	0/0:8,0:8:15.04:0,15,173	0/0:15,0:15:42.12:0,42,484	0/0:14,0:14:21.20:0,21,429	0/0:16,0:16:42.12:0,42,485	1/1:0,24:24:69.03:631,69,0	1/1:3,17:20:44.66:411,45,0	1/1:1,14:15:39.02:357,39,0
chr10	87942322	.	A	AC	3422.81	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-9.976;DP=562;FS=0.909;HRun=4;HaplotypeScore=56.6831;InbreedingCoeff=0.9876;MQ=91.37;MQ0=0;MQRankSum=-1.451;QD=34.93;ReadPosRankSum=-0.171;VQSLOD=3.8923;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1361	0/0:7,0:7:15.04:0,15,170	0/0:35,0:34:90.26:0,90,1021	0/0:14,0:14:23.77:0,24,327	0/0:18,0:18:39.11:0,39,442	0/0:18,0:18:54.15:0,54,612	0/0:22,0:22:63.16:0,63,704	0/0:44,0:44:99:0,120,1354	0/0:16,0:16:48.14:0,48,543	0/0:24,0:23:63.18:0,63,713	0/0:16,0:16:45.12:0,45,506	0/0:26,0:26:72.20:0,72,816	0/0:11,0:11:33.09:0,33,374	0/0:15,0:15:39.11:0,39,442	0/0:23,0:23:60.17:0,60,681	0/0:19,0:19:57.16:0,57,646	0/0:17,0:17:48.14:0,48,544	0/0:23,0:23:63.18:0,63,714	1/1:2,22:24:66.20:885,66,0	1/1:1,14:15:36.12:491,36,0	0/0:17,0:17:45.13:0,45,510	0/0:7,0:7:12.03:0,12,136	0/0:18,0:18:51.13:0,51,568	0/0:20,0:20:57.16:0,57,646	0/0:12,0:12:33.09:0,33,373	1/1:0,24:24:72.24:981,72,0	1/1:1,24:25:57.19:779,57,0	1/1:2,8:10:21.07:287,21,0
chr10	87942573	.	TTC	T	585.36	PASS	AB=0.976;AC=18;AF=0.321;AN=56;BaseQRankSum=0.912;DP=489;FS=44.646;HRun=0;HaplotypeScore=79.9903;InbreedingCoeff=-0.2571;MQ=45.18;MQ0=30;MQRankSum=-5.499;QD=2.08;ReadPosRankSum=-2.228;VQSLOD=-0.4264;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,3:39:9.93:10,0,406	0/1:2,0:2:12.01:12,0,34	1/1:40,0:6:2.18:18,2,0	0/0:56,0:11:11.99:0,12,112	0/0:25,0:25:40.07:0,40,430	0/0:16,0:14:12.60:0,13,171	0/0:6,0:4:0.18:0,0,50	0/1:21,2:22:67.77:68,0,260	0/1:7,1:8:3.18:3,0,93	0/0:24,0:22:39.78:0,40,431	0/1:19,2:20:2.18:2,0,310	0/1:10,0:8:19.79:20,0,128	0/0:11,0:9:8.58:0,9,97	0/1:13,0:13:35.22:35,0,123	0/0:10,0:10:6.59:0,7,156	0/0:13,0:12:12.58:0,13,73	0/0:19,0:17:17.54:0,18,358	0/1:12,0:11:6.73:7,0,94	0/1:22,0:21:10.20:143,0,10	0/1:11,0:8:0.05:26,0,0	0/1:5,0:5:9.15:9,0,25	0/1:5,0:4:24.27:24,0,29	0/0:10,0:10:0.30:0,0,148	0/0:16,1:16:17.53:0,18,149	0/1:22,1:23:86.19:86,0,263	0/1:18,0:17:23.79:141,0,24	0/1:17,0:15:3.44:98,0,3	0/1:11,0:9:12.45:29,0,12
chr10	87942609	.	TTC	T	888.87	PASS	AB=0.993;AC=18;AF=0.346;AN=52;BaseQRankSum=3.709;DP=382;FS=20.358;HRun=0;HaplotypeScore=66.9950;InbreedingCoeff=0.2749;MQ=40.84;MQ0=32;MQRankSum=-3.657;QD=5.08;ReadPosRankSum=5.735;VQSLOD=0.2400;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:35:57.89:0,58,856	1/1:0,4:4:3.01:43,3,0	./.	./.	0/0:18,0:18:33.47:0,33,479	0/1:17,1:15:12.30:35,0,12	0/1:11,0:7:7.82:12,0,8	0/0:19,0:17:47.94:0,48,648	0/0:10,0:9:19.52:0,20,222	1/1:4,10:11:23.96:295,24,0	1/1:1,13:14:12.45:296,12,0	0/0:14,0:12:1.99:0,2,29	0/0:10,0:9:17.96:0,18,249	0/1:14,0:14:9.72:10,0,117	0/0:11,0:11:21.03:0,21,270	0/0:9,0:8:21.02:0,21,316	1/1:6,8:13:15.85:247,16,0	0/1:14,0:13:1.16:1,0,77	0/0:16,0:15:1.23:0,1,64	1/1:11,0:10:7.38:46,7,0	0/0:7,0:4:6.01:0,6,81	0/1:11,0:8:21.21:28,0,21	0/0:8,0:8:21.52:0,22,320	0/0:17,0:15:26.78:0,27,422	0/0:17,0:17:43.21:0,43,668	0/1:15,0:14:28.33:28,0,59	0/1:10,0:10:5.88:6,0,20	0/1:25,0:17:7.05:7,0,40
chr10	87942610	.	TC	T	2111.96	PASS	AB=0.553;AC=28;AF=0.538;AN=52;BaseQRankSum=5.330;DP=312;FS=3.488;HRun=2;HaplotypeScore=40.6769;InbreedingCoeff=0.7470;MQ=42.34;MQ0=32;MQRankSum=-5.669;QD=13.04;ReadPosRankSum=3.043;VQSLOD=2.7560;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:25:48.05:0,48,603	1/1:4,0:4:2.92:17,3,0	./.	./.	0/0:14,0:14:32.99:0,33,360	1/1:6,9:13:24.05:279,24,0	1/1:4,6:7:18:207,18,0	0/0:18,0:16:36.01:0,36,426	0/0:8,0:7:17.91:0,18,169	1/1:12,0:9:23.43:139,23,0	1/1:14,0:14:26.32:157,26,0	1/1:1,9:8:6.02:76,6,0	0/0:9,0:8:14.85:0,15,171	0/1:2,9:11:53.60:239,0,54	0/0:9,0:9:18.02:0,18,199	0/0:10,0:9:21.01:0,21,234	1/1:10,0:9:20.49:124,20,0	0/1:2,8:9:28.76:103,0,29	1/1:1,9:9:18.06:224,18,0	1/1:1,8:8:8.56:79,9,0	0/0:5,0:2:6.01:0,6,66	1/1:3,5:5:5.93:40,6,0	0/0:9,0:9:23.90:0,24,251	0/0:14,0:12:24.04:0,24,306	0/0:15,0:15:39.08:0,39,478	1/1:3,8:10:24.03:287,24,0	1/1:1,6:7:11.99:152,12,0	1/1:9,12:13:15.05:191,15,0
chr10	87943449	.	TA	T	4255.18	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.564;DP=651;FS=0.000;HRun=10;HaplotypeScore=67.6737;InbreedingCoeff=0.9951;MQ=60.72;MQ0=0;MQRankSum=1.225;QD=20.36;ReadPosRankSum=0.985;VQSLOD=5.6684;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:86.37:0,86,909	1/1:1,13:14:35.99:312,36,0	0/0:27,0:23:19.77:0,20,374	0/0:9,0:7:15.03:0,15,155	0/0:26,0:26:63.14:0,63,679	0/0:22,0:22:54.12:0,54,580	0/0:22,0:22:48.11:0,48,520	0/0:28,2:30:31.10:0,31,564	0/0:28,0:28:75.15:0,75,801	1/1:5,16:21:47.97:417,48,0	1/1:7,17:24:50.96:443,51,0	0/0:24,0:24:45.11:0,45,486	0/0:26,0:26:63.15:0,63,684	0/0:19,0:19:35.25:0,35,554	0/0:26,0:26:75.19:0,75,819	0/0:23,1:24:43.13:0,43,704	1/1:3,25:28:68.96:599,69,0	0/0:22,0:22:57.03:0,57,613	1/1:8,14:22:44.95:384,45,0	1/1:2,25:27:74.98:649,75,0	0/0:12,0:12:33.09:0,33,365	0/0:14,0:15:41.95:0,42,446	0/0:31,0:31:81.18:0,81,866	0/0:16,0:16:39.99:0,40,433	0/0:25,2:27:46.09:0,46,718	1/1:6,16:22:17.80:384,18,0	1/1:3,26:29:74.98:651,75,0	1/1:1,21:22:47.99:417,48,0
chr10	87944512	.	CGT	C	6703.40	PASS	AB=0.520;AC=19;AF=0.339;AN=56;BaseQRankSum=6.914;DP=732;FS=3.783;HRun=0;HaplotypeScore=105.6840;InbreedingCoeff=0.9149;MQ=71.13;MQ0=2;MQRankSum=-1.504;QD=28.28;ReadPosRankSum=3.215;VQSLOD=6.2300;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,147,2391	1/1:1,4:5:9.03:115,9,0	0/0:27,1:27:31.72:0,32,911	0/0:23,0:23:57.06:0,57,849	0/0:20,0:20:51.17:0,51,856	1/1:2,7:9:18.06:231,18,0	1/1:3,24:27:51.17:656,51,0	0/0:30,0:30:66.21:0,66,1085	0/0:23,0:23:63.22:0,63,1057	1/1:4,21:25:60.19:771,60,0	1/1:1,8:9:24.08:308,24,0	1/1:4,34:37:83.63:1079,84,0	0/0:25,0:25:31.10:0,31,1047	1/1:5,25:30:75.24:963,75,0	0/0:27,0:27:72.23:0,72,1178	0/0:22,0:21:60.21:0,60,1004	1/1:7,42:49:99:1389,108,0	1/1:3,29:32:60.19:768,60,0	0/0:4,0:28:65.53:0,66,586	0/0:3,0:18:48.01:0,48,421	0/0:57,0:57:81.46:0,81,2134	0/1:1,12:13:11.45:424,0,11	0/0:23,0:23:36.31:0,36,883	0/0:39,0:39:99:0,105,1732	0/0:18,0:18:42.14:0,42,703	0/0:8,0:29:69.05:0,69,655	0/0:5,0:18:48.01:0,48,423	0/0:1,0:13:30.01:0,30,267
chr10	87945686	.	T	TA	6092.51	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-9.289;DP=687;FS=0.319;HRun=9;HaplotypeScore=73.1558;InbreedingCoeff=0.9965;MQ=75.52;MQ0=0;MQRankSum=0.053;QD=24.08;ReadPosRankSum=0.289;VQSLOD=5.4572;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,107,916	0/0:13,0:13:35.99:0,36,312	0/0:22,0:22:52.96:0,53,440	0/0:18,0:18:47.93:0,48,408	0/0:21,0:21:53.98:0,54,469	1/1:9,13:22:28.05:517,28,0	1/1:1,22:23:63.17:697,63,0	0/0:46,0:46:99:0,123,1065	0/0:22,0:22:59.97:0,60,521	0/0:33,0:33:86.96:0,87,750	0/0:17,0:17:17.59:0,18,314	1/1:9,19:28:60.14:652,60,0	0/0:19,0:19:53.99:0,54,469	1/1:3,20:23:22.07:472,22,0	0/0:28,0:28:80.96:0,81,700	0/0:26,0:26:71.98:0,72,625	0/0:28,0:28:80.94:0,81,693	1/1:0,13:13:33.09:365,33,0	1/1:5,16:21:48.09:503,48,0	1/1:6,22:28:60.12:650,60,0	0/0:29,0:29:62.93:0,63,545	1/1:4,21:25:63.13:682,63,0	0/0:27,0:27:56.97:0,57,495	0/0:15,0:15:38.96:0,39,332	0/0:23,0:23:65.98:0,66,573	1/1:6,15:21:22.06:459,22,0	1/1:4,33:37:81.05:896,81,0	1/1:2,10:12:18.05:199,18,0
chr10	87946730	.	G	GA	6210.60	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-13.389;DP=529;FS=14.501;HRun=7;HaplotypeScore=48.9100;InbreedingCoeff=0.9980;MQ=83.81;MQ0=0;MQRankSum=-1.262;QD=30.90;ReadPosRankSum=2.336;VQSLOD=3.8458;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.08:0,81,768	0/0:7,0:7:21.02:0,21,197	0/0:24,0:23:47.29:0,47,478	0/0:14,0:15:19.61:0,20,232	0/0:24,0:24:63.09:0,63,604	1/1:3,14:17:42.13:507,42,0	1/1:1,24:25:48.15:580,48,0	0/0:42,0:42:99:0,111,1068	0/0:13,0:13:33.04:0,33,314	0/0:23,0:23:66.10:0,66,634	0/0:17,0:17:45.05:0,45,427	1/1:1,11:12:24.07:290,24,0	0/0:12,0:12:33.04:0,33,313	1/1:1,13:14:39.12:471,39,0	0/0:12,0:12:27.04:0,27,261	0/0:17,0:17:51.07:0,51,487	0/0:21,0:21:60.10:0,60,579	1/1:2,11:13:33.10:399,33,0	1/1:2,20:22:60.18:722,60,0	1/1:1,21:22:57.17:689,57,0	0/0:14,0:14:39.05:0,39,372	1/1:0,19:19:54.08:633,54,0	0/0:19,0:19:54.09:0,54,521	0/0:14,0:14:42.07:0,42,405	0/0:24,0:24:69.11:0,69,666	1/1:3,19:22:57.17:689,57,0	1/1:1,22:23:66.20:797,66,0	1/1:0,12:12:36.11:435,36,0
chr10	87947587	.	T	TA	1251.59	PASS	AB=0.960;AC=13;AF=0.232;AN=56;BaseQRankSum=4.256;DP=441;FS=0.551;HRun=11;HaplotypeScore=77.7090;InbreedingCoeff=0.6872;MQ=63.26;MQ0=5;MQRankSum=-1.309;QD=9.07;ReadPosRankSum=-1.289;VQSLOD=2.4827;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:43.45:0,43,331	0/0:8,0:8:15.04:0,15,62	0/0:34,0:11:16.42:0,16,99	0/1:17,1:2:0.01:0,0,0	0/0:19,0:20:19.45:0,19,261	0/0:13,0:13:22.77:0,23,143	0/1:13,1:14:4.10:4,0,120	0/0:22,0:22:28.81:0,29,392	0/0:10,0:9:17.91:0,18,137	0/0:16,0:16:3.33:0,3,94	0/0:14,0:14:23.86:0,24,123	0/0:12,0:12:19.67:0,20,99	0/0:10,0:10:17.91:0,18,139	0/0:14,0:14:19.64:0,20,120	0/0:13,0:15:29.99:0,30,225	0/0:16,0:15:38.83:0,39,298	0/1:30,0:30:14.76:15,0,226	0/0:27,0:27:53.99:0,54,313	1/1:3,6:7:15.03:152,15,0	1/1:8,7:16:33.98:346,34,0	0/0:8,0:7:14.88:0,15,108	0/0:5,0:5:8.82:0,9,57	0/0:13,0:13:29.88:0,30,232	0/0:5,0:5:14.94:0,15,116	0/0:23,0:23:53.73:0,54,412	1/1:14,10:24:44.82:433,45,0	1/1:9,12:20:10.25:436,10,0	1/1:5,1:5:3.01:30,3,0
chr10	87947600	.	C	CA	2033.67	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=8.016;DP=446;FS=1.491;HRun=9;HaplotypeScore=69.1113;InbreedingCoeff=0.7459;MQ=68.14;MQ0=6;MQRankSum=-1.102;QD=9.42;ReadPosRankSum=-0.962;VQSLOD=2.0037;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:40.41:0,40,350	0/0:7,0:7:17.67:0,18,141	0/1:40,0:16:29.47:29,0,50	0/0:20,0:4:2.81:0,3,19	0/0:16,0:17:46.82:0,47,381	1/1:2,15:17:16.36:285,16,0	1/1:3,6:9:0.99:121,1,0	0/0:23,0:23:53.96:0,54,464	0/0:8,0:7:17.99:0,18,156	0/0:18,0:18:41.96:0,42,358	0/0:14,0:14:30.67:0,31,282	1/1:0,9:9:21.06:231,21,0	0/0:9,0:9:20.97:0,21,178	1/1:3,10:14:17.94:181,18,0	0/1:14,0:14:0.39:0,0,153	0/0:15,0:14:38.96:0,39,332	0/0:35,0:35:83.90:0,84,717	1/1:5,25:30:1.88:435,2,0	1/1:5,1:8:17.41:106,17,0	1/1:4,1:19:52.74:343,53,0	0/0:9,0:8:17.96:0,18,150	1/1:1,3:4:6.02:66,6,0	0/0:11,0:11:20.98:0,21,182	0/0:7,0:7:17.99:0,18,156	0/0:19,0:19:47.95:0,48,408	1/1:9,0:25:50.79:265,51,0	1/1:12,0:23:31.14:166,31,0	0/1:1,0:1:0:0,0,0
chr10	87947783	.	GAA	G	1788.39	PASS	AB=0.558;AC=12;AF=0.214;AN=56;BaseQRankSum=6.279;DP=543;FS=10.307;HRun=13;HaplotypeScore=76.5333;InbreedingCoeff=0.7653;MQ=58.95;MQ0=17;MQRankSum=2.711;QD=12.42;ReadPosRankSum=6.790;VQSLOD=1.2812;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:70:0,70,837	0/0:3,0:10:12.20:0,12,42	0/0:30,0:7:13.66:0,14,101	0/0:36,0:10:18.10:0,18,135	0/0:21,0:22:37.61:0,38,451	1/1:3,15:18:41.80:390,42,0	1/1:3,18:25:43.73:408,44,0	0/0:32,0:34:83.62:0,84,972	0/0:19,0:19:44.44:0,44,546	0/0:7,1:21:10.87:0,11,122	0/0:4,0:12:17.47:0,17,60	1/1:5,21:26:46.35:485,46,0	0/0:18,0:18:50.93:0,51,648	1/1:6,10:15:14.96:145,15,0	0/0:13,0:13:33.08:0,33,411	0/0:10,0:11:27.78:0,28,335	0/1:4,4:26:82.42:84,0,82	0/1:6,17:23:14.46:281,0,14	0/0:20,0:19:41.30:0,41,454	0/0:12,0:14:31.59:0,32,318	0/0:13,0:14:38.22:0,38,473	1/1:2,7:9:18:175,18,0	0/0:12,0:12:21.06:0,21,285	0/0:10,0:12:24.06:0,24,299	0/0:16,0:16:45.11:0,45,612	0/0:20,0:19:44.91:0,45,544	0/0:27,0:27:64.06:0,64,844	0/0:7,0:9:21.07:0,21,288
chr10	87948792	.	CA	C	7736.49	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=15.269;DP=677;FS=14.247;HRun=8;HaplotypeScore=84.3255;InbreedingCoeff=0.9993;MQ=79.16;MQ0=0;MQRankSum=-0.378;QD=23.88;ReadPosRankSum=2.889;VQSLOD=4.3518;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,165,1974	1/1:1,7:8:21.03:203,21,0	0/0:18,0:19:36.75:0,37,393	0/0:19,0:18:36.03:0,36,371	0/0:26,0:26:78.20:0,78,907	1/1:1,19:20:54.09:521,54,0	1/1:6,22:28:54.08:521,54,0	0/0:25,0:25:63.18:0,63,749	0/0:32,0:32:93.27:0,93,1104	1/1:1,23:24:66.10:637,66,0	1/1:0,19:19:51.08:492,51,0	1/1:4,23:27:63.10:608,63,0	0/0:26,0:26:78.23:0,78,932	1/1:2,18:20:48.07:463,48,0	0/0:22,0:22:60.17:0,60,713	0/0:22,0:22:60.16:0,60,700	1/1:5,26:31:69.10:666,69,0	1/1:2,21:23:48.08:464,48,0	1/1:1,26:27:78.07:734,78,0	1/1:4,12:16:36.05:346,36,0	0/0:40,0:41:99:0,111,1305	1/1:1,22:23:63.10:608,63,0	0/0:12,0:12:30.09:0,30,357	0/0:33,0:33:87.27:0,87,1050	0/0:17,0:17:48.14:0,48,568	1/1:2,20:22:60.08:573,60,0	1/1:1,22:23:57.09:550,57,0	1/1:1,12:13:36.06:348,36,0
chr10	87949219	.	CG	C	5908.94	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.082;DP=674;FS=4.343;HRun=5;HaplotypeScore=67.2604;InbreedingCoeff=0.9996;MQ=81.44;MQ0=0;MQRankSum=-0.752;QD=29.99;ReadPosRankSum=1.717;VQSLOD=5.5855;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,147,1993	1/1:0,10:10:30.09:340,30,0	0/0:23,0:23:60.18:0,60,778	0/0:11,0:11:27.48:0,27,322	0/0:33,0:33:90.27:0,90,1186	0/0:18,0:18:51.17:0,51,697	0/0:15,0:15:39.13:0,39,531	0/0:37,0:37:99:0,102,1364	0/0:13,0:13:39.13:0,39,533	1/1:1,32:33:93.26:1054,93,0	1/1:4,15:19:42.01:458,42,0	0/0:32,0:32:93.31:0,93,1264	0/0:22,0:22:60.20:0,60,818	0/0:31,0:31:90.27:0,90,1188	0/0:30,0:30:84.28:0,84,1148	0/0:30,0:30:87.22:0,87,1142	1/1:0,40:40:99:1293,114,0	0/0:19,0:19:51.17:0,51,697	1/1:2,16:18:48.14:544,48,0	1/1:3,15:18:39.08:429,39,0	0/0:30,0:30:90.26:0,90,1193	0/0:20,0:20:60.18:0,60,788	0/0:27,0:27:63.19:0,63,829	0/0:18,0:18:51.17:0,51,696	0/0:14,0:14:39.12:0,39,518	1/1:1,32:33:90.24:1009,90,0	1/1:0,16:16:42.12:476,42,0	1/1:1,9:10:27.08:306,27,0
chr10	87950084	.	G	GT	71.97	PASS	AB=0.792;AC=8;AF=0.143;AN=56;BaseQRankSum=10.372;DP=467;FS=44.390;HRun=0;HaplotypeScore=99.8952;InbreedingCoeff=-0.1641;MQ=74.16;MQ0=0;MQRankSum=-7.690;QD=0.59;ReadPosRankSum=3.673;VQSLOD=-0.0717;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:63.14:0,63,867	0/0:4,0:4:9.03:0,9,125	0/0:20,0:20:44.63:0,45,624	0/0:10,0:10:27.03:0,27,322	0/0:14,5:19:21.54:0,22,293	0/0:14,1:14:16.18:0,16,488	0/0:15,2:17:25.05:0,25,425	0/1:16,4:20:39.52:40,0,568	0/0:18,2:20:18.83:0,19,597	0/1:8,4:12:39.45:39,0,255	0/0:11,4:15:28.55:0,29,421	0/0:10,1:11:21.31:0,21,405	0/1:12,4:16:17.41:17,0,452	0/1:8,4:12:31.47:31,0,292	0/1:15,5:20:48.25:48,0,487	0/0:18,2:20:25.93:0,26,718	0/0:17,1:18:32.71:0,33,604	0/0:23,1:24:39.86:0,40,822	0/0:16,0:16:45.12:0,45,624	0/0:14,1:15:9.31:0,9,394	0/0:21,1:22:45.90:0,46,582	0/1:10,7:17:0.07:0,0,326	0/0:9,5:14:13.37:0,13,254	0/0:14,1:15:7.17:0,7,197	0/0:14,4:18:4.10:0,4,463	0/1:16,3:19:15.94:16,0,552	0/0:22,2:24:40.42:0,40,818	0/1:4,1:5:3.12:3,0,152
chr10	88104314	.	ATTGT	A	1626.85	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.120;DP=593;FS=0.000;HRun=0;HaplotypeScore=115.8143;InbreedingCoeff=0.9891;MQ=68.53;MQ0=0;MQRankSum=-0.995;QD=43.97;ReadPosRankSum=3.186;VQSLOD=4.3037;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:37:93.26:1722,93,0	0/0:12,0:12:33.09:0,33,799	0/0:12,0:10:26.85:0,27,494	0/0:16,0:13:29.05:0,29,573	0/0:24,0:24:69.22:0,69,1728	0/0:18,0:18:51.18:0,51,1296	0/0:19,0:19:57.20:0,57,1463	0/0:34,0:34:96.26:0,96,2293	0/0:25,0:25:75.21:0,75,1891	0/0:26,0:26:69.23:0,69,1717	0/0:24,0:24:69.17:0,69,1666	0/0:18,0:18:51.10:0,51,1216	0/0:22,0:22:63.20:0,63,1586	0/0:19,0:19:57.20:0,57,1478	0/0:19,0:19:57.15:0,57,1425	0/0:25,0:25:69.24:0,69,1754	0/0:21,0:21:54.18:0,54,1331	0/0:16,0:16:48.16:0,48,1256	0/0:40,0:40:99:0,120,2886	0/0:22,0:22:63.22:0,63,1606	0/0:22,0:22:63.22:0,63,1633	0/0:20,0:20:57.20:0,57,1433	0/0:22,0:22:57.14:0,57,1377	0/0:16,0:16:48.16:0,48,1223	0/0:9,0:9:27.04:0,27,594	0/0:24,0:24:69.17:0,69,1693	0/0:25,0:25:72.22:0,72,1810	0/0:6,0:6:18.06:0,18,440
chr10	88105166	.	C	CG	2008.96	PASS	AB=0.988;AC=25;AF=0.463;AN=54;BaseQRankSum=-1.905;DP=390;FS=41.023;HRun=0;HaplotypeScore=179.7202;InbreedingCoeff=-0.2156;MQ=78.40;MQ0=0;MQRankSum=-2.677;QD=6.50;ReadPosRankSum=-10.131;VQSLOD=0.3432;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:36,1:37:5.18:339,5,0	0/0:7,0:7:8.21:0,8,23	0/0:17,0:17:47.88:0,48,378	0/0:16,0:16:41.56:0,42,315	1/1:13,0:13:9.16:134,9,0	0/1:13,0:13:11.41:26,0,11	0/1:12,0:12:11.47:101,0,11	0/0:15,0:15:12.64:0,13,32	0/1:9,1:10:3.88:107,0,4	0/1:13,0:13:17.26:40,0,17	0/1:13,0:13:13.03:92,0,13	0/1:18,0:18:10.54:159,0,11	0/1:14,0:14:19.79:99,0,20	0/1:15,1:16:26:73,0,26	0/1:11,0:11:9.87:10,0,28	0/1:12,0:12:11.76:12,0,30	0/1:19,1:20:13.62:46,0,14	1/1:5,0:5:0.26:2,0,0	0/0:6,0:5:2.08:0,2,6	0/1:20,0:20:6.75:200,0,7	1/1:20,2:22:25.89:336,26,0	0/1:19,0:19:8.90:199,0,9	0/1:12,0:12:3.79:97,0,4	0/1:8,0:8:2.18:2,0,4	0/1:11,0:11:19.23:42,0,19	0/0:18,0:18:15.07:0,15,50	0/1:10,0:10:26.22:48,0,26	./.
chr10	88110044	.	CCACACCCACACGCACACACA	C	8650.18	PASS	AB=0.552;AC=22;AF=0.393;AN=56;BaseQRankSum=12.434;DP=603;FS=19.430;HRun=0;HaplotypeScore=248.0173;InbreedingCoeff=0.7516;MQ=53.99;MQ0=52;MQRankSum=-7.728;QD=43.91;ReadPosRankSum=3.111;VQSLOD=2.5865;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:30.27:0,30,663	1/1:0,6:6:3.01:167,3,0	0/0:32,0:11:22.06:0,22,990	0/0:41,0:21:42.39:0,42,2234	0/0:21,0:21:39.13:0,39,3092	1/1:1,11:12:18.06:1000,18,0	0/1:8,24:27:18.98:161,0,19	0/0:24,0:23:66.13:0,66,3285	0/0:15,0:13:39.01:0,39,2508	1/1:3,24:25:60.88:1783,61,0	1/1:0,11:11:9.03:500,9,0	1/1:3,13:14:8.50:499,9,0	0/0:20,0:18:47.97:0,48,3227	1/1:3,10:11:6.02:333,6,0	0/0:17,0:16:45.02:0,45,2818	0/0:20,0:19:57.12:0,57,3987	1/1:2,11:12:9.03:500,9,0	0/1:2,14:15:44.91:607,0,45	0/0:21,0:21:57.20:0,57,3786	0/0:10,0:10:18.95:0,19,1367	0/0:70,0:65:99:0,181,14069	1/1:0,25:25:27.09:1407,27,0	0/0:12,0:12:19.70:0,20,1684	0/0:42,0:38:91.29:0,91,7104	0/0:21,0:21:51.13:0,51,4273	1/1:3,19:20:45.07:1528,45,0	0/0:15,0:14:33.11:0,33,1936	1/1:0,4:4:3.01:167,3,0
chr10	88110056	.	G	GCACA	1634.15	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-4.405;DP=650;FS=1.438;HRun=0;HaplotypeScore=153.4242;InbreedingCoeff=0.6769;MQ=52.52;MQ0=24;MQRankSum=-0.269;QD=17.96;ReadPosRankSum=-2.713;VQSLOD=3.2562;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:34:7.85:132,8,0	0/0:6,0:6:3:0,3,28	0/0:40,0:13:0.85:0,1,142	0/0:44,0:25:27.39:0,27,340	0/0:18,0:19:36.12:0,36,581	0/0:11,0:11:18.02:0,18,167	0/0:28,0:26:2.75:0,3,28	0/0:36,0:34:47.45:0,47,890	0/0:13,0:14:27.08:0,27,419	0/0:26,0:24:7.17:0,7,180	0/0:11,0:11:9.01:0,9,84	0/0:13,0:13:9.01:0,9,84	0/0:17,0:17:38.74:0,39,573	0/0:10,0:10:5.80:0,6,41	0/0:18,0:18:39.07:0,39,588	0/0:22,0:22:36.07:0,36,542	0/0:11,0:11:9.01:0,9,84	0/0:16,0:15:10.26:0,10,86	1/1:8,18:26:12.72:888,13,0	1/1:6,4:11:8.75:220,9,0	0/0:79,0:82:99:0,185,2938	0/0:25,0:25:24.03:0,24,223	0/0:10,0:11:18.05:0,18,274	0/0:48,0:49:91.06:0,91,1324	0/0:18,0:18:39.12:0,39,608	0/0:20,0:19:12.04:0,12,184	1/1:4,11:16:26.56:538,27,0	0/0:4,0:4:3:0,3,28
chr10	88111682	.	A	AT	3006.22	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=14.436;DP=481;FS=8.688;HRun=7;HaplotypeScore=110.8117;InbreedingCoeff=0.8342;MQ=76.97;MQ0=1;MQRankSum=-9.227;QD=11.56;ReadPosRankSum=-0.295;VQSLOD=1.7779;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:18:39.89:205,40,0	1/1:8,0:10:12:63,12,0	0/0:29,0:25:15.13:0,15,279	0/0:10,0:10:20.69:0,21,176	0/0:18,0:18:47.58:0,48,426	1/1:6,15:20:42.92:450,43,0	1/1:6,6:12:20.84:190,21,0	0/0:23,0:23:60.04:0,60,553	0/0:18,0:18:48.06:0,48,459	1/1:16,0:16:16.26:85,16,0	1/1:18,0:19:29.10:157,29,0	1/1:4,12:16:33.09:374,33,0	0/0:15,0:15:45.04:0,45,421	1/1:8,4:12:12.85:143,13,0	0/0:21,0:21:60.07:0,60,570	0/0:17,0:16:48.05:0,48,454	1/1:10,0:11:15.10:89,15,0	1/1:6,3:9:8.98:87,9,0	0/1:19,0:19:51.46:51,0,84	1/1:24,0:24:42.50:177,42,0	0/0:15,0:15:39.04:0,39,367	1/1:6,6:12:21.01:223,21,0	0/0:20,0:20:53.96:0,54,485	0/0:16,0:18:49.14:0,49,446	0/0:17,0:17:36.04:0,36,347	1/1:6,15:21:45.67:449,46,0	0/1:25,0:24:17.20:119,0,17	1/1:2,11:12:32.86:367,33,0
chr10	88111689	.	T	TG	2189.22	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=3.837;DP=434;FS=10.440;HRun=8;HaplotypeScore=100.3989;InbreedingCoeff=0.6665;MQ=78.38;MQ0=1;MQRankSum=-6.888;QD=13.27;ReadPosRankSum=3.907;VQSLOD=2.4023;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:34.25:0,34,137	0/0:2,0:5:10.37:0,10,31	0/0:26,0:22:23.31:0,23,214	0/0:10,0:10:7.46:0,7,77	0/0:18,0:18:42.91:0,43,384	1/1:14,0:17:8.26:130,8,0	0/1:6,0:9:11.17:47,0,11	0/0:24,0:24:56.95:0,57,498	0/0:19,0:19:54:0,54,483	0/0:3,0:8:15.35:0,15,55	0/0:3,0:12:19.08:0,19,59	1/1:11,0:12:27.14:148,27,0	0/0:15,0:15:39.01:0,39,356	0/1:8,0:9:22.55:23,0,45	0/0:22,0:22:57.01:0,57,518	0/0:19,0:18:50.99:0,51,452	0/0:3,0:7:8.15:0,8,24	1/1:6,0:6:1.54:19,2,0	1/1:8,12:20:42.03:436,42,0	1/1:5,23:28:65.90:675,66,0	0/0:15,0:15:38.98:0,39,344	0/1:8,0:9:9.89:60,0,10	0/0:19,0:19:44.54:0,45,373	0/0:18,0:18:53.75:0,54,458	0/0:15,0:15:41.75:0,42,363	1/1:14,0:16:23.28:137,23,0	1/1:5,21:25:49.17:617,49,0	1/1:12,0:12:2.53:92,3,0
chr10	88112651	.	T	TG	1176.03	PASS	AB=1.000;AC=20;AF=0.370;AN=54;BaseQRankSum=0.810;DP=335;FS=106.484;HRun=0;HaplotypeScore=54.7704;InbreedingCoeff=0.7695;MQ=67.38;MQ0=7;MQRankSum=-8.602;QD=10.05;ReadPosRankSum=5.337;VQSLOD=0.2984;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:15:13.07:28,0,13	./.	0/0:28,0:14:35.58:0,36,272	0/0:24,0:9:14.12:0,14,124	0/0:19,0:19:46.05:0,46,404	1/1:11,0:11:29.31:175,29,0	1/1:9,0:9:26.34:152,26,0	0/0:34,0:33:77.81:0,78,690	0/0:5,0:5:12.01:0,12,120	1/1:16,0:16:8.72:207,9,0	1/1:14,0:14:11.39:66,11,0	1/1:16,0:15:44:265,44,0	0/0:8,0:8:14.93:0,15,118	1/1:5,0:5:14.76:98,15,0	0/0:16,0:16:45.03:0,45,474	0/0:10,0:10:29.84:0,30,265	1/1:6,0:6:14.64:85,15,0	0/0:1,4:4:0:0,0,0	0/0:15,0:14:34.74:0,35,304	0/0:14,0:14:27.53:0,28,194	0/0:5,0:5:15.03:0,15,159	1/1:10,0:10:21.30:140,21,0	0/0:8,0:8:16.23:0,16,143	0/0:3,0:3:3:0,3,28	0/0:6,0:6:11.62:0,12,98	0/1:9,0:9:4.39:106,0,4	0/0:17,0:17:36.12:0,36,286	1/1:3,0:3:8.83:53,9,0
chr10	88112953	.	TA	T	1831.01	PASS	AC=42;AF=1.000;AN=42;BaseQRankSum=-1.683;DP=100;FS=0.000;HRun=8;HaplotypeScore=42.8728;InbreedingCoeff=-0.0632;MQ=58.54;MQ0=0;MQRankSum=-1.732;QD=19.48;ReadPosRankSum=1.683;VQSLOD=3.0033;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:4:12.01:111,12,0	./.	1/1:1,1:2:1.61:26,2,0	./.	1/1:0,5:5:12.01:112,12,0	1/1:0,3:3:9.01:87,9,0	1/1:0,2:2:6.01:58,6,0	1/1:1,7:7:18.03:174,18,0	1/1:3,4:6:11.95:104,12,0	1/1:1,6:7:18.02:174,18,0	1/1:4,3:7:3:29,3,0	./.	1/1:0,3:3:9.01:87,9,0	./.	1/1:0,2:2:6.01:58,6,0	1/1:0,8:7:20.95:190,21,0	./.	./.	1/1:3,5:8:15.02:145,15,0	1/1:3,4:7:11.90:94,12,0	1/1:0,2:2:3:29,3,0	1/1:0,3:3:9.01:87,9,0	1/1:0,2:1:2.92:17,3,0	1/1:0,2:2:6.01:58,6,0	1/1:0,1:1:2.96:19,3,0	1/1:2,5:7:15.02:145,15,0	1/1:0,4:4:11.96:104,12,0	./.
chr10	88115228	.	AC	A	6537.86	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=15.144;DP=576;FS=2.337;HRun=6;HaplotypeScore=73.3507;InbreedingCoeff=0.9915;MQ=63.71;MQ0=4;MQRankSum=-3.166;QD=27.24;ReadPosRankSum=2.191;VQSLOD=5.4854;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,114,1498	1/1:2,14:16:36:369,36,0	0/0:13,0:9:19.63:0,20,308	0/0:12,0:7:11.03:0,11,129	0/0:22,0:22:60.19:0,60,788	1/1:1,16:17:45.11:481,45,0	1/1:4,24:27:69.17:734,69,0	0/0:19,0:18:51.10:0,51,618	0/0:16,0:16:42.14:0,42,550	1/1:1,21:22:63.16:676,63,0	1/1:1,15:16:45.11:480,45,0	1/1:3,15:17:45.07:470,45,0	0/0:15,0:15:36.12:0,36,467	1/1:2,20:22:54.13:580,54,0	0/0:20,0:20:60.18:0,60,774	0/0:23,0:23:69.21:0,69,892	1/1:3,31:33:87.22:935,87,0	1/1:1,18:19:51.13:547,51,0	0/0:12,0:11:27.09:0,27,350	0/0:22,0:22:60.19:0,60,783	0/0:29,0:29:81.26:0,81,1048	1/1:1,13:14:36.04:373,36,0	0/0:20,0:20:57.18:0,57,739	0/0:18,0:18:48.14:0,48,616	0/0:20,0:20:51.14:0,51,641	1/1:4,25:29:69.15:731,69,0	0/0:32,0:31:90.29:0,90,1171	1/1:0,5:5:15.04:161,15,0
chr10	88116617	.	GAA	G	8854.37	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=15.949;DP=607;FS=4.968;HRun=7;HaplotypeScore=85.7029;InbreedingCoeff=0.9990;MQ=66.26;MQ0=2;MQRankSum=0.350;QD=32.55;ReadPosRankSum=3.410;VQSLOD=4.8527;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:25:60.19:764,60,0	1/1:1,14:15:39.12:497,39,0	0/0:20,0:17:39.08:0,39,584	0/0:13,0:11:20.37:0,20,253	0/0:31,0:31:90.31:0,90,1574	1/1:0,24:24:57.18:726,57,0	1/1:1,11:12:30.09:382,30,0	0/0:38,0:38:94.20:0,94,1604	0/0:14,0:14:39.13:0,39,679	1/1:3,18:21:54.15:673,54,0	1/1:2,26:28:62.99:803,63,0	1/1:0,17:17:45.14:574,45,0	0/0:23,0:23:60.21:0,60,1049	1/1:0,15:14:39.12:497,39,0	0/0:24,0:24:63.22:0,63,1093	0/0:23,0:23:66.23:0,66,1155	1/1:1,23:24:66.21:841,66,0	1/1:1,23:24:69.22:879,69,0	0/0:27,0:27:66.23:0,66,1154	0/0:25,0:25:69.24:0,69,1207	0/0:8,0:8:24.08:0,24,407	1/1:1,24:25:66.21:841,66,0	0/0:21,0:21:60.21:0,60,1049	0/0:20,0:20:57.20:0,57,994	0/0:23,0:23:66.18:0,66,1122	1/1:3,21:23:60.19:765,60,0	0/0:25,0:25:72.25:0,72,1258	1/1:0,18:18:48.15:612,48,0
chr10	88117139	.	G	GT	754.11	PASS	AC=20;AF=0.435;AN=46;BaseQRankSum=3.169;DP=214;FS=0.000;HRun=0;HaplotypeScore=56.5815;InbreedingCoeff=0.6980;MQ=74.48;MQ0=5;MQRankSum=-3.997;QD=8.02;ReadPosRankSum=3.567;VQSLOD=3.2419;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,4:7:11:74,11,0	1/1:4,0:4:8.97:70,9,0	0/0:30,0:12:19.61:0,20,150	0/0:20,0:9:2.58:0,3,129	./.	1/1:8,0:8:13.56:58,14,0	1/1:20,0:18:31.95:164,32,0	0/0:1,0:1:2.37:0,2,8	0/0:4,0:4:5.87:0,6,41	./.	0/0:1,0:1:1.55:0,2,4	1/1:7,0:7:14.62:84,15,0	0/0:5,0:5:2.99:0,3,24	1/1:7,1:8:2.04:70,2,0	0/0:9,0:9:17.91:0,18,144	0/0:9,0:9:8.03:0,8,56	1/1:16,1:17:4.49:199,4,0	1/1:6,0:6:15.61:74,16,0	0/0:9,0:8:18:0,18,158	./.	0/0:7,0:6:7.24:0,7,55	1/1:6,0:6:6.34:34,6,0	0/0:3,0:3:5.99:0,6,49	0/0:2,0:2:5.99:0,6,49	./.	1/1:11,0:9:18.75:95,19,0	0/0:11,0:11:14.96:0,15,120	./.
chr10	88117152	.	GCCCT	G	1704.68	PASS	AC=20;AF=0.417;AN=48;BaseQRankSum=6.194;DP=178;FS=22.378;HRun=0;HaplotypeScore=49.7334;InbreedingCoeff=0.7836;MQ=79.94;MQ0=4;MQRankSum=-7.617;QD=25.83;ReadPosRankSum=5.715;VQSLOD=1.0811;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:26.89:289,27,0	./.	0/0:25,0:11:15.91:0,16,281	0/0:21,0:11:27.91:0,28,471	./.	1/1:4,1:5:12.04:167,12,0	1/1:9,5:12:27.51:379,28,0	0/0:6,0:6:17.95:0,18,376	0/0:5,0:5:9.03:0,9,203	1/1:0,3:3:6.02:93,6,0	./.	1/1:1,3:4:8.99:127,9,0	0/0:3,0:3:3.01:0,3,72	1/1:5,0:5:9.03:102,9,0	0/0:7,0:7:18.06:0,18,430	0/0:10,0:9:15.05:0,15,354	1/1:0,8:8:9.03:168,9,0	1/1:5,1:6:18.06:297,18,0	0/0:5,0:4:12.04:0,12,287	0/0:3,0:3:3.01:0,3,56	0/0:6,0:5:12.02:0,12,213	1/1:2,0:2:6.02:71,6,0	0/0:1,0:1:3.01:0,3,83	0/0:4,0:4:12.04:0,12,288	0/0:1,0:1:3.01:0,3,72	1/1:5,1:5:15.05:195,15,0	0/0:12,0:11:33.11:0,33,792	./.
chr10	88117153	.	CCCT	C	1434.08	PASS	AC=20;AF=0.400;AN=50;BaseQRankSum=6.685;DP=184;FS=19.434;HRun=0;HaplotypeScore=46.8648;InbreedingCoeff=0.7619;MQ=79.37;MQ0=3;MQRankSum=-7.820;QD=22.41;ReadPosRankSum=6.032;VQSLOD=1.5762;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:12:27.01:460,27,0	./.	0/0:24,0:11:15.85:0,16,256	0/0:22,0:11:28.59:0,29,466	0/0:1,0:1:3.01:0,3,45	1/1:5,0:5:12.03:124,12,0	1/1:14,0:12:26.97:264,27,0	0/0:8,0:8:21.96:0,22,464	0/0:5,0:5:9.03:0,9,192	1/1:3,0:3:6.02:82,6,0	./.	1/1:4,0:4:6.02:71,6,0	0/0:3,0:3:3.01:0,3,70	1/1:4,0:4:9:78,9,0	0/0:8,0:8:21.07:0,21,451	0/0:11,0:9:15.05:0,15,351	1/1:8,0:8:9.03:124,9,0	1/1:6,0:6:18.05:214,18,0	0/0:6,0:5:15.04:0,15,307	0/0:4,0:4:3.01:0,3,54	0/0:7,0:6:15.03:0,15,251	1/1:2,0:2:6.01:55,6,0	0/0:1,0:1:3.01:0,3,71	0/0:4,0:4:12.04:0,12,281	0/0:1,0:1:3.01:0,3,70	1/1:6,0:5:15.02:147,15,0	0/0:13,0:12:36.12:0,36,797	./.
chr10	88117399	.	TA	T	6140.51	PASS	AB=0.533;AC=45;AF=0.938;AN=48;BaseQRankSum=-4.098;DP=283;FS=0.000;HRun=1;HaplotypeScore=370.2139;InbreedingCoeff=0.3743;MQ=26.66;MQ0=4;MQRankSum=-0.752;QD=22.25;ReadPosRankSum=5.482;VQSLOD=3.2129;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,10:11:24.53:318,25,0	1/1:0,6:5:8.39:92,8,0	./.	./.	1/1:1,23:19:31.33:440,31,0	1/1:0,6:4:9.03:126,9,0	1/1:1,12:13:34.98:428,35,0	1/1:0,8:7:21.07:291,21,0	1/1:0,8:8:7.83:199,8,0	1/1:0,15:14:28.77:461,29,0	1/1:1,13:11:17.07:237,17,0	0/1:1,7:7:1.28:112,0,1	1/1:1,8:7:13.81:225,14,0	1/1:0,14:11:22.79:263,23,0	1/1:0,9:7:17.79:221,18,0	1/1:0,14:12:23.53:369,24,0	1/1:1,12:10:21.17:207,21,0	1/1:1,4:4:9.03:126,9,0	1/1:0,9:8:16.87:215,17,0	1/1:1,13:10:16.75:283,17,0	./.	1/1:0,14:14:10.58:209,11,0	1/1:0,11:10:19.67:224,20,0	0/0:0,3:2:2.37:0,2,8	1/1:1,12:11:20.51:238,21,0	1/1:1,20:18:40.29:506,40,0	1/1:2,14:14:29.82:351,30,0	./.
chr10	88117406	.	TG	T	5530.46	PASS	AB=0.500;AC=46;AF=0.958;AN=48;BaseQRankSum=-4.402;DP=275;FS=5.303;HRun=3;HaplotypeScore=420.0956;InbreedingCoeff=0.1457;MQ=26.89;MQ0=1;MQRankSum=0.562;QD=20.33;ReadPosRankSum=6.433;VQSLOD=1.8664;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:10.69:164,11,0	1/1:0,6:5:8.39:92,8,0	./.	./.	1/1:1,23:20:33.09:443,33,0	1/1:0,7:5:9.03:124,9,0	1/1:0,12:12:29.91:342,30,0	1/1:0,7:6:17.65:217,18,0	1/1:0,10:10:1.35:187,1,0	1/1:1,17:17:28.27:459,28,0	1/1:0,12:10:14.07:211,14,0	0/1:0,7:7:1.28:111,0,1	1/1:0,8:7:13.81:226,14,0	1/1:0,13:10:19.56:212,20,0	1/1:0,11:9:17.67:218,18,0	1/1:0,13:13:23.53:364,24,0	1/1:0,10:9:18.15:157,18,0	1/1:0,4:3:9.03:125,9,0	1/1:0,8:7:13.64:144,14,0	1/1:2,15:14:12.24:236,12,0	./.	1/1:0,14:14:10.58:207,11,0	1/1:0,11:10:19.67:222,20,0	0/1:0,5:4:0.53:2,0,1	1/1:0,13:11:20.21:234,20,0	1/1:0,19:18:40.29:504,40,0	1/1:1,14:15:29.32:332,29,0	./.
chr10	88117410	.	GA	G	3067.60	PASS	AB=0.500;AC=46;AF=0.958;AN=48;BaseQRankSum=-4.170;DP=274;FS=0.910;HRun=3;HaplotypeScore=429.1780;InbreedingCoeff=0.1120;MQ=26.88;MQ0=1;MQRankSum=0.805;QD=11.32;ReadPosRankSum=7.155;VQSLOD=0.9491;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,6:8:7.57:75,8,0	1/1:2,4:5:8.04:58,8,0	./.	./.	1/1:2,22:20:27.26:251,27,0	1/1:0,7:5:9:77,9,0	1/1:0,12:12:27.79:207,28,0	1/1:2,5:6:6.75:77,7,0	1/1:0,10:10:0.94:109,1,0	1/1:0,18:17:28.02:299,28,0	1/1:1,11:10:14:128,14,0	0/1:0,7:7:1.32:64,0,1	1/1:2,6:7:10.62:105,11,0	1/1:1,12:10:12.22:105,12,0	1/1:0,11:9:16.90:133,17,0	1/1:0,13:13:22.95:209,23,0	1/1:0,10:9:17.92:114,18,0	1/1:0,4:3:9.01:84,9,0	1/1:1,7:7:10.62:74,11,0	1/1:1,15:13:9.35:124,9,0	./.	1/1:1,13:14:6.37:118,6,0	1/1:1,10:10:11.69:122,12,0	0/1:0,5:4:0.54:1,0,1	1/1:0,13:11:18.85:146,19,0	1/1:2,17:18:32.77:265,33,0	1/1:0,15:15:23.43:200,23,0	./.
chr10	88117414	.	GC	G	3536.33	PASS	AB=0.500;AC=46;AF=0.958;AN=48;BaseQRankSum=-4.057;DP=256;FS=0.000;HRun=3;HaplotypeScore=441.2254;InbreedingCoeff=0.1226;MQ=27.22;MQ0=1;MQRankSum=0.092;QD=13.92;ReadPosRankSum=6.310;VQSLOD=0.7073;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:6:7.59:85,8,0	1/1:0,4:3:8.04:62,8,0	./.	./.	1/1:0,22:18:32.41:291,32,0	1/1:0,7:5:9.01:88,9,0	1/1:0,12:12:28.84:233,29,0	1/1:0,5:4:7.54:82,8,0	1/1:0,10:10:1.33:130,1,0	1/1:0,18:17:28.08:315,28,0	1/1:0,11:9:14.03:141,14,0	0/1:0,7:7:1.30:75,0,1	1/1:0,6:6:10.71:123,11,0	1/1:1,11:9:12.72:123,13,0	1/1:0,11:9:16.94:152,17,0	1/1:0,13:13:23.22:243,23,0	1/1:0,10:9:17.69:96,18,0	1/1:0,4:3:9.02:91,9,0	1/1:1,6:6:10.63:78,11,0	1/1:1,15:13:12.33:164,12,0	./.	1/1:1,12:13:6.73:132,7,0	1/1:0,10:9:12.88:136,13,0	0/1:0,5:4:0.53:1,0,1	1/1:0,13:11:18.87:164,19,0	1/1:1,16:16:32.88:284,33,0	1/1:0,15:15:28.77:248,29,0	./.
chr10	88117423	.	TG	T	4594.42	PASS	AB=0.500;AC=48;AF=0.960;AN=50;BaseQRankSum=-3.538;DP=276;FS=0.000;HRun=1;HaplotypeScore=542.3610;InbreedingCoeff=0.0791;MQ=28.89;MQ0=0;MQRankSum=1.023;QD=16.65;ReadPosRankSum=3.791;VQSLOD=1.2870;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:0.90:97,1,0	1/1:0,3:3:8.24:84,8,0	./.	./.	1/1:0,22:22:37.68:398,38,0	1/1:0,7:6:9.91:108,10,0	1/1:0,15:15:17.93:285,18,0	1/1:1,6:7:11.10:118,11,0	1/1:0,10:10:4.71:158,5,0	1/1:0,19:19:29.98:399,30,0	0/1:0,13:13:7.94:171,0,8	1/1:0,8:8:1.63:109,2,0	1/1:0,9:9:6.66:158,7,0	1/1:0,12:12:22.33:186,22,0	1/1:0,8:8:17.30:184,17,0	1/1:0,14:14:24.99:311,25,0	1/1:0,9:9:9.11:42,9,0	1/1:0,3:3:9.03:112,9,0	1/1:0,6:6:10.63:94,11,0	1/1:0,13:13:14.44:210,14,0	./.	1/1:0,15:15:7.76:199,8,0	1/1:0,9:9:17.17:191,17,0	0/1:0,4:4:0.53:1,0,1	1/1:0,15:15:19.54:205,20,0	1/1:0,21:21:37.48:398,37,0	1/1:0,25:25:36.73:366,37,0	1/1:0,2:2:3.85:11,4,0
chr10	88117427	.	GC	G	4603.58	PASS	AB=0.500;AC=48;AF=0.960;AN=50;BaseQRankSum=-3.454;DP=276;FS=0.000;HRun=1;HaplotypeScore=542.3223;InbreedingCoeff=0.0833;MQ=28.89;MQ0=0;MQRankSum=-0.981;QD=16.68;ReadPosRankSum=2.364;VQSLOD=1.2677;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:1.27:97,1,0	1/1:0,3:3:8.24:84,8,0	./.	./.	1/1:0,22:22:37.57:395,38,0	1/1:0,7:6:9.50:107,9,0	1/1:0,15:15:18.68:281,19,0	1/1:0,6:7:11.10:118,11,0	1/1:1,9:10:4.40:144,4,0	1/1:0,19:19:29.98:398,30,0	0/1:0,13:13:6.21:201,0,6	1/1:0,8:8:1.63:109,2,0	1/1:0,9:9:6.62:157,7,0	1/1:0,12:12:22.69:185,23,0	1/1:0,8:8:17.30:183,17,0	1/1:0,14:14:24.99:310,25,0	1/1:0,9:9:9.11:42,9,0	1/1:0,3:3:9.03:111,9,0	1/1:0,6:6:10.63:94,11,0	1/1:0,13:13:14.89:218,15,0	./.	1/1:0,15:15:7.69:198,8,0	1/1:0,9:9:16.77:184,17,0	0/1:0,4:4:0.53:1,0,1	1/1:0,15:15:24.02:215,24,0	1/1:0,21:21:37.48:397,37,0	1/1:0,25:25:36.69:364,37,0	1/1:0,2:2:3.85:11,4,0
chr10	88117434	.	GA	G	5084.20	PASS	AB=0.500;AC=45;AF=0.900;AN=50;BaseQRankSum=-4.468;DP=313;FS=5.445;HRun=2;HaplotypeScore=616.8228;InbreedingCoeff=0.0186;MQ=28.87;MQ0=0;MQRankSum=0.663;QD=16.24;ReadPosRankSum=2.334;VQSLOD=0.8798;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:10.86:130,11,0	1/1:1,2:3:7.97:58,8,0	./.	./.	1/1:0,23:23:38.39:426,38,0	0/1:0,10:9:13.54:101,0,14	1/1:1,16:17:31.47:321,31,0	1/1:1,8:9:2.96:107,3,0	1/1:0,13:13:0.01:196,0,0	1/1:0,20:20:25.31:391,25,0	0/1:0,13:13:4.40:207,0,4	0/1:0,11:11:25.94:117,0,26	1/1:0,13:13:11.94:249,12,0	1/1:0,12:12:24.69:216,25,0	1/1:0,10:10:23.33:235,23,0	1/1:0,15:15:28.29:350,28,0	1/1:0,9:9:9.12:45,9,0	1/1:0,3:3:9.03:114,9,0	1/1:0,7:7:11.11:96,11,0	1/1:0,16:16:10.72:234,11,0	./.	1/1:0,16:16:4.10:201,4,0	1/1:0,10:10:19.80:202,20,0	0/1:0,5:5:0.53:1,0,1	1/1:0,20:20:9.83:247,10,0	1/1:0,21:21:38.41:412,38,0	1/1:0,27:27:41.11:423,41,0	0/1:0,3:3:0.06:4,0,0
chr10	88117440	.	TG	T	1794.28	PASS	AB=0.544;AC=41;AF=0.820;AN=50;BaseQRankSum=-4.240;DP=320;FS=2.273;HRun=1;HaplotypeScore=649.6733;InbreedingCoeff=0.0079;MQ=28.91;MQ0=0;MQRankSum=-1.381;QD=5.66;ReadPosRankSum=-1.043;VQSLOD=0.7269;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,6:8:9.60:71,10,0	1/1:0,3:3:7.91:42,8,0	./.	./.	1/1:3,20:24:34.36:191,34,0	0/1:1,9:9:8.22:50,0,8	1/1:7,9:16:2.47:71,2,0	0/1:3,5:8:6.33:6,0,14	0/1:1,12:13:9.23:80,0,9	1/1:6,16:22:6.52:93,7,0	0/1:1,13:14:10.01:88,0,10	0/1:1,10:11:26.12:56,0,26	1/1:0,14:14:9.74:114,10,0	1/1:1,13:14:9.62:90,10,0	1/1:1,9:10:15.96:108,16,0	1/1:1,13:14:20.46:148,20,0	1/1:2,7:9:8.62:28,9,0	1/1:1,2:3:5.97:44,6,0	1/1:0,7:7:10.03:63,10,0	1/1:3,14:17:6.89:70,7,0	./.	0/1:3,13:16:4.80:59,0,5	1/1:3,7:10:9.31:46,9,0	0/1:1,4:5:0.53:1,0,1	1/1:3,17:20:24.60:140,25,0	1/1:8,12:20:18.19:74,18,0	1/1:5,24:29:26.22:180,26,0	0/0:0,3:3:1.19:0,1,4
chr10	88117445	.	AC	A	1622.80	PASS	AB=0.500;AC=40;AF=0.800;AN=50;BaseQRankSum=-2.400;DP=263;FS=1.489;HRun=1;HaplotypeScore=577.2172;InbreedingCoeff=-0.0460;MQ=28.89;MQ0=0;MQRankSum=0.447;QD=6.24;ReadPosRankSum=-1.063;VQSLOD=0.8144;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:6:5.03:46,5,0	1/1:0,3:3:8.03:57,8,0	./.	./.	1/1:1,20:21:33.64:207,34,0	0/1:0,9:8:11.06:38,0,11	0/1:0,9:9:9.49:11,0,9	0/1:0,5:5:4.77:5,0,6	0/1:0,12:12:10.07:75,0,10	1/1:0,16:16:1.51:91,2,0	0/1:0,13:13:13.17:92,0,13	0/1:0,10:10:29.05:44,0,29	1/1:0,14:14:10.95:143,11,0	1/1:0,13:13:8:84,8,0	1/1:0,9:9:15.23:103,15,0	1/1:0,13:13:18.50:150,19,0	1/1:0,7:7:8.87:31,9,0	1/1:0,2:2:5.98:48,6,0	1/1:0,7:7:10.04:66,10,0	1/1:0,14:14:4.28:71,4,0	./.	0/1:0,13:13:10.22:56,0,10	1/1:0,7:7:4.76:42,5,0	0/1:0,4:4:0.53:1,0,1	1/1:0,17:17:19.17:102,19,0	1/1:0,12:12:9.97:59,10,0	1/1:0,24:24:16.77:127,17,0	0/0:0,3:3:0.97:0,1,4
chr10	88117451	.	AAC	A	4028.16	PASS	AB=0.500;AC=46;AF=0.920;AN=50;BaseQRankSum=-1.349;DP=263;FS=27.715;HRun=0;HaplotypeScore=574.6415;InbreedingCoeff=0.2527;MQ=28.89;MQ0=0;MQRankSum=-0.949;QD=15.55;ReadPosRankSum=-1.218;VQSLOD=1.4130;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:6:4.52:120,5,0	1/1:0,3:3:7.58:95,8,0	./.	./.	1/1:0,21:21:29.03:416,29,0	1/1:0,9:8:12.49:107,12,0	0/1:0,9:9:6.92:88,0,7	1/1:0,5:5:0.44:2,0,0	1/1:0,12:12:26.41:260,26,0	1/1:0,16:16:21.34:271,21,0	1/1:0,13:13:13.50:225,14,0	1/1:0,10:10:15.60:117,16,0	1/1:0,14:14:17.71:305,18,0	1/1:0,13:13:14.54:188,15,0	1/1:0,9:9:20.55:250,21,0	1/1:0,13:13:15.11:337,15,0	0/1:0,7:7:3.62:23,0,4	1/1:0,2:2:6.02:90,6,0	1/1:0,7:7:4.91:102,5,0	1/1:0,14:14:22.78:203,23,0	./.	1/1:0,13:13:13.14:125,13,0	1/1:0,7:7:8.51:82,9,0	0/0:0,4:4:3.28:0,3,8	1/1:0,17:17:27.02:234,27,0	1/1:0,12:12:21.26:120,21,0	1/1:0,24:24:29.34:252,29,0	1/1:0,3:3:4.33:13,4,0
chr10	88117458	.	TG	T	3966.07	PASS	AB=0.500;AC=47;AF=0.940;AN=50;BaseQRankSum=-1.956;DP=321;FS=0.644;HRun=1;HaplotypeScore=692.1934;InbreedingCoeff=-0.0949;MQ=28.91;MQ0=0;MQRankSum=-0.787;QD=12.36;ReadPosRankSum=-0.878;VQSLOD=0.0170;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:10.25:117,10,0	1/1:0,5:5:6.96:90,7,0	./.	./.	1/1:0,24:24:38.99:398,39,0	0/1:0,13:12:23.61:68,0,24	1/1:0,12:12:20.77:164,21,0	1/1:0,7:7:0.33:79,0,0	1/1:0,17:17:4.55:199,5,0	1/1:0,20:20:10.05:248,10,0	1/1:0,14:14:0.10:204,0,0	0/1:0,12:12:37.18:84,0,37	1/1:0,16:16:16.08:283,16,0	1/1:0,13:13:19.06:190,19,0	1/1:0,13:13:19.04:214,19,0	1/1:0,14:14:22.25:303,22,0	1/1:0,8:8:1.86:38,2,0	1/1:0,2:2:6.02:83,6,0	1/1:0,9:9:11.78:118,12,0	1/1:0,14:14:6.85:159,7,0	./.	0/1:0,15:15:0.77:103,0,1	1/1:0,9:9:11.83:105,12,0	1/1:0,6:6:1.54:8,2,0	1/1:0,18:18:27.93:237,28,0	1/1:0,15:15:20.18:161,20,0	1/1:0,31:31:38.62:290,39,0	1/1:0,6:6:6.22:23,6,0
chr10	88117465	.	AC	A	1138.36	PASS	AB=0.500;AC=40;AF=0.800;AN=50;BaseQRankSum=-0.395;DP=294;FS=1.396;HRun=1;HaplotypeScore=628.7580;InbreedingCoeff=-0.1932;MQ=32.39;MQ0=0;MQRankSum=0.078;QD=3.89;ReadPosRankSum=-2.324;VQSLOD=-0.4131;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:3.03:34,3,0	1/1:0,4:4:1.53:25,2,0	./.	./.	1/1:0,20:20:16.91:76,17,0	0/1:0,14:13:25.92:33,0,26	0/1:0,11:11:2.27:73,0,2	1/1:0,8:7:3.28:68,3,0	0/1:0,15:15:11.31:44,0,11	1/1:0,18:18:10.86:101,11,0	0/1:0,12:12:21.92:22,0,22	0/1:0,12:12:15.85:16,0,46	1/1:0,14:14:1.78:80,2,0	0/1:0,10:10:1.20:13,0,1	1/1:0,13:13:13.23:138,13,0	1/1:0,12:12:11.79:107,12,0	1/1:0,7:7:1.54:20,2,0	1/1:0,1:1:3.01:35,3,0	0/1:0,7:7:1.64:27,0,2	0/1:0,12:12:2.05:27,0,2	./.	0/1:0,12:12:11.27:11,0,18	1/1:0,8:8:0.61:22,1,0	0/1:0,6:6:0.33:0,0,2	1/1:0,17:17:18.40:85,18,0	1/1:0,16:16:11.97:83,12,0	1/1:0,31:31:18.99:104,19,0	1/1:0,6:6:2.22:10,2,0
chr10	88117468	.	TG	T	1153.52	PASS	AB=0.500;AC=43;AF=0.827;AN=52;BaseQRankSum=-0.467;DP=294;FS=0.000;HRun=1;HaplotypeScore=628.7191;InbreedingCoeff=-0.1795;MQ=32.39;MQ0=0;MQRankSum=-1.056;QD=3.92;ReadPosRankSum=-2.104;VQSLOD=-0.3263;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:0.77:26,1,0	1/1:0,4:4:1.54:25,2,0	./.	0/1:0,0:1:0:0,0,0	1/1:0,20:20:20.92:99,21,0	0/1:0,14:13:25.71:40,0,26	0/1:0,11:11:1.56:83,0,2	1/1:0,8:7:3.31:76,3,0	0/1:0,15:15:10.24:47,0,10	1/1:0,18:18:10.95:103,11,0	0/1:0,12:12:11.06:11,0,24	0/1:0,12:12:16.87:17,0,45	1/1:0,14:14:2.45:83,2,0	1/1:0,10:10:0.02:12,0,0	1/1:0,13:13:13.98:103,14,0	1/1:0,12:12:12.15:101,12,0	1/1:0,7:7:1.60:21,2,0	1/1:0,1:1:2.98:22,3,0	0/1:0,7:7:1.28:31,0,1	0/1:0,12:12:1.79:27,0,2	./.	0/1:0,12:12:11.63:12,0,18	1/1:0,8:8:1.09:23,1,0	1/1:0,6:6:1.48:14,1,0	1/1:0,17:17:18.65:88,19,0	1/1:0,16:16:11.98:84,12,0	1/1:0,31:31:19.68:107,20,0	1/1:0,6:6:2.22:10,2,0
chr10	88117472	.	GA	G	2620.77	PASS	AB=0.500;AC=46;AF=0.885;AN=52;BaseQRankSum=-1.571;DP=294;FS=2.271;HRun=1;HaplotypeScore=623.2441;InbreedingCoeff=-0.0352;MQ=32.39;MQ0=0;MQRankSum=-0.614;QD=8.94;ReadPosRankSum=-0.344;VQSLOD=0.5034;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:5.25:57,5,0	1/1:0,4:4:3.94:48,4,0	./.	0/0:1,0:1:2.90:0,3,16	1/1:0,20:20:31.23:232,31,0	0/1:0,14:13:23.07:64,0,23	1/1:0,11:11:18.73:190,19,0	1/1:0,8:7:3.34:121,3,0	1/1:0,15:15:0.41:118,0,0	1/1:0,18:18:14.43:217,14,0	0/1:0,12:12:11.35:50,0,11	0/1:0,12:12:42.15:42,0,42	1/1:0,14:14:11.27:200,11,0	1/1:1,9:10:10.02:60,10,0	1/1:0,13:13:19.23:206,19,0	1/1:0,12:12:17.15:218,17,0	1/1:0,7:7:1.86:38,2,0	1/1:0,1:1:3.01:38,3,0	1/1:0,7:7:7.91:68,8,0	1/1:0,12:12:0.83:75,1,0	./.	0/1:0,12:12:20.13:24,0,20	1/1:0,8:8:10.70:67,11,0	1/1:0,6:6:2.47:22,2,0	1/1:0,17:17:24.91:194,25,0	1/1:0,16:16:18.64:158,19,0	1/1:0,31:31:32.35:206,32,0	1/1:0,6:6:6.22:23,6,0
chr10	88117478	.	AG	A	2253.15	PASS	AB=0.518;AC=41;AF=0.820;AN=50;BaseQRankSum=-1.498;DP=331;FS=0.000;HRun=2;HaplotypeScore=722.3692;InbreedingCoeff=0.0345;MQ=32.03;MQ0=0;MQRankSum=0.595;QD=6.83;ReadPosRankSum=0.787;VQSLOD=0.2485;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,7:8:4.77:51,5,0	0/1:1,3:4:0.11:5,0,0	./.	0/0:1,0:1:3.01:0,3,35	1/1:0,22:22:32.41:227,32,0	0/1:1,15:15:23.21:23,0,28	1/1:0,12:12:18.91:205,19,0	1/1:2,12:13:21.40:344,21,0	0/1:1,14:15:4.51:67,0,5	1/1:0,19:19:16.44:234,16,0	0/1:0,14:14:16:44,0,16	0/1:1,13:14:1.91:2,0,53	1/1:1,15:16:4.40:138,4,0	1/1:0,10:10:8.85:54,9,0	1/1:3,11:14:9.63:71,10,0	1/1:1,11:12:10.71:125,11,0	1/1:0,7:7:8.41:44,8,0	./.	1/1:0,8:8:8.98:98,9,0	0/1:0,18:18:8.57:32,0,9	./.	0/1:0,14:14:20.72:21,0,25	1/1:0,10:10:1.28:46,1,0	1/1:1,5:6:5.04:53,5,0	1/1:1,18:19:14.99:127,15,0	1/1:0,19:19:19.59:155,20,0	1/1:0,33:33:32.63:195,33,0	1/1:0,6:6:5.13:19,5,0
chr10	88117489	.	GA	G	2152.20	PASS	AB=0.502;AC=40;AF=0.769;AN=52;BaseQRankSum=-2.086;DP=320;FS=2.133;HRun=3;HaplotypeScore=667.6975;InbreedingCoeff=0.0375;MQ=32.10;MQ0=0;MQRankSum=-0.195;QD=7.13;ReadPosRankSum=3.158;VQSLOD=0.1410;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:2.49:54,2,0	1/1:0,3:3:0.38:3,0,0	./.	0/0:1,0:1:3.01:0,3,35	1/1:0,22:22:33.66:270,34,0	0/1:0,17:16:27.53:28,0,28	1/1:0,12:12:23.65:244,24,0	1/1:0,11:10:30.10:416,30,0	0/1:1,15:16:9.94:38,0,10	1/1:0,18:18:6.67:126,7,0	0/1:0,13:13:9.06:49,0,9	0/0:1,16:17:2.38:0,2,70	0/1:0,16:16:14.67:85,0,15	1/1:0,9:9:7.99:60,8,0	1/1:0,11:11:9.50:80,9,0	0/1:0,7:7:2.57:11,0,3	1/1:0,8:8:15.02:87,15,0	1/1:0,1:1:2.04:6,2,0	1/1:0,5:5:8.63:124,9,0	0/1:0,20:20:0.20:55,0,0	./.	0/1:0,11:11:2.28:24,0,2	0/1:0,10:10:2.55:44,0,3	1/1:0,4:4:2.33:44,2,0	1/1:0,19:19:15.12:134,15,0	1/1:0,19:19:14.26:93,14,0	1/1:2,33:34:32.49:178,32,0	1/1:0,6:6:6.22:23,6,0
chr10	88117502	.	TA	T	1728.09	PASS	AB=0.502;AC=39;AF=0.780;AN=50;BaseQRankSum=-2.164;DP=319;FS=2.023;HRun=1;HaplotypeScore=660.9570;InbreedingCoeff=-0.0377;MQ=32.14;MQ0=0;MQRankSum=1.920;QD=5.76;ReadPosRankSum=0.768;VQSLOD=0.8054;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:2.49:40,2,0	0/0:0,2:2:0.58:0,1,3	./.	./.	1/1:0,24:24:18.31:200,18,0	0/1:0,15:15:27.82:28,0,28	1/1:0,14:14:7.58:197,8,0	1/1:0,13:12:22.14:382,22,0	0/1:0,18:18:9.61:27,0,10	1/1:0,17:17:5.24:112,5,0	0/1:0,11:11:18.07:28,0,18	0/0:0,16:16:6.69:0,7,80	0/1:1,16:17:15.56:70,0,16	1/1:0,7:7:4.38:27,4,0	1/1:0,11:11:9.04:64,9,0	1/1:0,7:7:3.66:21,4,0	1/1:0,7:7:12.14:61,12,0	1/1:0,1:1:2.04:6,2,0	1/1:0,4:4:11.83:128,12,0	0/1:0,19:19:4.44:47,0,4	./.	0/1:0,8:8:6.34:16,0,6	0/1:0,10:10:24.95:34,0,25	1/1:0,4:4:2.10:37,2,0	1/1:0,19:19:7.92:102,8,0	1/1:0,22:22:14.41:91,14,0	1/1:0,37:37:5.39:117,5,0	1/1:0,7:7:6.37:22,6,0
chr10	88117509	.	AG	A	1671.30	PASS	AB=0.528;AC=38;AF=0.760;AN=50;BaseQRankSum=-2.050;DP=337;FS=3.893;HRun=1;HaplotypeScore=695.1325;InbreedingCoeff=-0.0623;MQ=31.98;MQ0=0;MQRankSum=0.596;QD=5.19;ReadPosRankSum=-0.773;VQSLOD=0.7157;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:4.64:46,5,0	0/1:1,2:3:1.10:2,0,1	./.	./.	1/1:0,25:25:33.99:223,34,0	0/1:0,17:17:27.32:27,0,35	1/1:1,12:13:9.80:195,10,0	1/1:3,14:16:12.60:345,13,0	0/1:0,18:18:14.31:26,0,14	0/1:1,20:21:1.12:121,0,1	0/1:1,11:12:14.81:27,0,15	0/0:0,14:14:2.92:0,3,68	0/1:3,15:18:10.50:72,0,11	0/1:2,7:9:3.35:23,0,3	1/1:0,13:13:10.39:66,10,0	1/1:0,8:8:10.15:32,10,0	1/1:0,4:4:3.57:37,4,0	1/1:0,2:2:3.59:10,4,0	1/1:1,3:4:9.50:116,9,0	0/1:1,19:20:5.22:45,0,5	./.	0/1:0,8:8:12.31:12,0,14	0/1:1,9:10:3.02:3,0,4	1/1:1,3:4:4.32:40,4,0	1/1:2,18:20:7.05:100,7,0	1/1:1,22:23:11.08:85,11,0	1/1:0,37:37:14.96:125,15,0	1/1:0,7:7:6.37:21,6,0
chr10	88117516	.	TA	T	1580.36	PASS	AB=0.512;AC=39;AF=0.780;AN=50;BaseQRankSum=-2.185;DP=347;FS=2.152;HRun=3;HaplotypeScore=717.5420;InbreedingCoeff=-0.0852;MQ=31.91;MQ0=0;MQRankSum=0.741;QD=4.89;ReadPosRankSum=-0.680;VQSLOD=0.1220;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:0.24:40,0,0	1/1:0,4:4:0.01:9,0,0	./.	./.	1/1:1,28:29:32.36:232,32,0	0/1:1,18:19:26.83:27,0,38	1/1:0,11:11:12.77:156,13,0	1/1:3,14:17:2.63:214,3,0	1/1:1,16:17:3.40:38,3,0	0/1:1,19:20:4.47:119,0,4	0/1:1,12:13:10.30:38,0,10	0/0:0,14:14:2.38:0,2,67	0/1:0,20:20:13.82:73,0,14	0/1:0,9:9:4.04:43,0,4	1/1:2,13:15:8.10:65,8,0	1/1:0,7:7:10.37:33,10,0	1/1:1,3:4:3.56:38,4,0	1/1:0,3:3:4.84:14,5,0	1/1:0,5:5:3.78:121,4,0	0/1:3,17:20:2.97:45,0,3	./.	0/1:0,9:9:12.98:20,0,13	0/0:0,9:9:0.05:0,0,5	1/1:0,4:4:4.32:40,4,0	1/1:1,19:20:6.38:101,6,0	1/1:3,20:23:10.91:89,11,0	1/1:2,37:37:16.97:126,17,0	1/1:0,7:7:5.89:20,6,0
chr10	88117556	.	AT	A	1823.78	PASS	AB=0.500;AC=40;AF=0.741;AN=54;BaseQRankSum=-1.319;DP=335;FS=6.221;HRun=1;HaplotypeScore=672.8312;InbreedingCoeff=0.0128;MQ=32.03;MQ0=0;MQRankSum=0.714;QD=5.65;ReadPosRankSum=-2.584;VQSLOD=0.6024;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:6.65:59,7,0	1/1:0,7:7:4.48:79,4,0	./.	0/0:1,0:1:3.01:0,3,46	1/1:0,26:26:14.16:117,14,0	0/1:0,17:17:13.67:69,0,14	0/0:0,7:7:0.20:0,0,3	0/1:0,14:14:4.06:23,0,4	1/1:0,13:13:7.51:108,8,0	0/1:0,19:19:20.42:52,0,20	0/1:0,12:12:2.89:83,0,3	0/1:0,14:14:29.38:59,0,29	0/1:0,14:14:9.03:72,0,9	0/1:0,8:8:4.13:17,0,4	1/1:0,17:17:7.99:158,8,0	1/1:0,10:10:12.87:57,13,0	1/1:0,2:2:0.01:4,0,0	1/1:0,5:4:6.23:23,6,0	1/1:0,15:15:5.74:116,6,0	1/1:0,24:24:10.07:185,10,0	1/1:0,3:3:4.99:16,5,0	0/1:0,6:6:2.35:39,0,2	1/1:0,13:13:2.79:77,3,0	0/0:0,4:4:3.16:0,3,9	1/1:0,17:17:4.82:133,5,0	1/1:0,23:23:14.52:163,15,0	1/1:1,28:28:16.66:191,17,0	1/1:0,6:6:11.26:54,11,0
chr10	88117560	.	AT	A	1952.75	PASS	AB=0.500;AC=41;AF=0.759;AN=54;BaseQRankSum=-1.533;DP=335;FS=6.302;HRun=1;HaplotypeScore=672.3456;InbreedingCoeff=0.0175;MQ=32.03;MQ0=0;MQRankSum=0.396;QD=5.92;ReadPosRankSum=-1.573;VQSLOD=0.6752;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:6.91:81,7,0	1/1:1,6:7:4.48:79,4,0	./.	0/0:1,0:1:3.01:0,3,32	1/1:0,26:26:14.64:139,15,0	0/1:0,17:17:14.89:71,0,15	0/1:0,7:7:0.75:1,0,2	0/1:0,14:14:3.33:25,0,3	1/1:0,13:13:7.52:111,8,0	0/1:0,19:19:17.73:60,0,18	0/1:0,12:12:2.95:88,0,3	0/1:0,14:14:29.38:60,0,29	0/1:0,14:14:9.02:73,0,9	0/1:0,8:8:4.13:17,0,4	1/1:0,17:17:8:160,8,0	1/1:0,10:10:12.84:57,13,0	1/1:0,2:2:0.01:4,0,0	1/1:0,5:4:6.44:45,6,0	1/1:0,15:15:6.96:125,7,0	1/1:0,24:24:10.21:187,10,0	1/1:0,3:3:5.30:16,5,0	0/1:0,6:6:2.33:39,0,2	1/1:0,13:13:2.94:78,3,0	0/0:0,4:4:3.94:0,4,10	1/1:0,17:17:4.82:138,5,0	1/1:0,23:23:14.80:175,15,0	1/1:0,29:28:18.71:198,19,0	1/1:0,6:6:11.26:56,11,0
chr10	88117585	.	TG	T	4759.15	PASS	AB=0.500;AC=48;AF=0.889;AN=54;BaseQRankSum=-6.027;DP=326;FS=16.306;HRun=1;HaplotypeScore=593.2723;InbreedingCoeff=0.1957;MQ=32.11;MQ0=0;MQRankSum=1.241;QD=14.73;ReadPosRankSum=0.139;VQSLOD=1.1324;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:12.76:132,13,0	1/1:0,7:7:5.31:114,5,0	./.	0/0:1,0:1:3.01:0,3,36	1/1:0,21:21:17.35:191,17,0	1/1:0,14:14:9.57:208,10,0	1/1:0,6:6:6.72:89,7,0	1/1:0,7:7:11.37:66,11,0	1/1:0,16:16:18.56:278,19,0	0/1:0,20:20:5.37:181,0,5	1/1:0,12:12:0.45:143,0,0	1/1:0,18:18:6.29:335,6,0	0/1:0,15:15:3.46:112,0,3	1/1:0,11:11:4.90:133,5,0	1/1:0,16:16:19.93:281,20,0	1/1:0,12:12:22.03:181,22,0	0/0:0,2:2:1.55:0,2,4	1/1:0,7:6:12.43:114,12,0	1/1:0,10:10:2.95:190,3,0	1/1:0,24:24:28.45:417,28,0	1/1:0,4:4:6.32:53,6,0	1/1:0,5:5:0.40:71,0,0	1/1:0,13:13:15.75:173,16,0	1/1:0,6:6:2.99:40,3,0	1/1:0,20:20:25.42:364,25,0	1/1:0,20:20:26.26:346,26,0	1/1:0,24:23:25.20:376,25,0	1/1:0,6:6:15.10:173,15,0
chr10	88117588	.	GC	G	3552.07	PASS	AB=0.584;AC=47;AF=0.904;AN=52;BaseQRankSum=-5.073;DP=325;FS=12.757;HRun=3;HaplotypeScore=619.5704;InbreedingCoeff=0.0205;MQ=28.91;MQ0=0;MQRankSum=-0.762;QD=11.00;ReadPosRankSum=1.779;VQSLOD=-0.1888;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,7:9:12.75:107,13,0	1/1:1,6:7:4.52:86,5,0	./.	./.	1/1:10,11:21:16.65:139,17,0	1/1:3,11:14:9.56:165,10,0	1/1:1,5:6:6.13:66,6,0	1/1:5,2:7:0.20:10,0,0	1/1:4,12:16:17.45:214,17,0	0/1:6,14:20:6.76:137,0,7	1/1:2,10:12:0.29:110,0,0	1/1:5,13:18:6.10:258,6,0	0/1:4,11:15:6.37:85,0,6	1/1:0,11:11:4.89:108,5,0	1/1:1,15:16:19.91:223,20,0	1/1:2,10:12:21.81:144,22,0	0/0:1,1:2:1.55:0,2,4	1/1:3,4:6:9.12:53,9,0	0/1:3,7:10:2.90:78,0,3	1/1:5,19:24:27.98:320,28,0	1/1:1,3:4:6.75:45,7,0	1/1:1,4:5:0.39:55,0,0	1/1:3,10:13:13.46:134,13,0	1/1:2,4:6:2.99:31,3,0	1/1:3,17:20:25.36:285,25,0	1/1:6,14:20:27.24:282,27,0	1/1:9,15:22:21.09:282,21,0	1/1:0,6:6:15.09:134,15,0
chr10	88117595	.	CG	C	1736.77	PASS	AB=0.667;AC=49;AF=0.875;AN=56;BaseQRankSum=-3.376;DP=247;FS=9.511;HRun=1;HaplotypeScore=444.0034;InbreedingCoeff=0.1581;MQ=46.12;MQ0=0;MQRankSum=-0.455;QD=7.09;ReadPosRankSum=3.220;VQSLOD=0.3407;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:12.46:61,12,0	1/1:0,6:6:3.99:41,4,0	0/0:1,0:1:1.55:0,2,4	0/1:4,0:4:6.49:6,0,7	1/1:0,11:11:11.30:62,11,0	1/1:0,11:11:6.42:80,6,0	1/1:0,5:5:10.49:53,10,0	1/1:0,2:2:0.48:5,0,0	1/1:0,12:12:18.11:110,18,0	0/1:0,14:14:5.49:76,0,5	0/1:0,10:10:0.31:48,0,0	1/1:0,12:13:20.18:132,20,0	1/1:0,11:11:4.31:42,4,0	1/1:0,10:11:4.60:62,5,0	1/1:0,15:15:16.95:107,17,0	1/1:0,10:10:16.97:78,17,0	0/0:0,1:1:1.55:0,2,4	1/1:0,4:4:3.75:20,4,0	1/1:0,7:7:0.62:41,1,0	1/1:0,19:19:25.04:164,25,0	1/1:0,3:3:6.67:30,7,0	1/1:0,4:4:0.11:27,0,0	1/1:0,10:10:12.35:72,12,0	1/1:0,4:4:2.90:16,3,0	1/1:0,17:17:19.54:140,20,0	1/1:0,14:14:20.14:139,20,0	1/1:0,15:14:17.86:141,18,0	1/1:0,6:6:14.83:79,15,0
chr10	88118802	.	AAAAAAC	A	4800.28	PASS	AB=0.860;AC=18;AF=0.321;AN=56;BaseQRankSum=10.876;DP=543;FS=0.402;HRun=0;HaplotypeScore=140.6106;InbreedingCoeff=0.8604;MQ=76.73;MQ0=3;MQRankSum=-10.342;QD=26.67;ReadPosRankSum=-2.881;VQSLOD=4.2287;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,6:19:43.10:521,43,0	0/0:10,0:10:27.07:0,27,685	0/1:31,0:17:2.10:2,0,323	0/0:24,0:20:28.85:0,29,669	0/0:32,0:32:70.56:0,71,2035	1/1:10,9:19:51.08:821,51,0	1/1:7,6:13:28.59:427,29,0	0/0:32,0:32:84.19:0,84,2252	0/0:22,0:22:63.09:0,63,1561	0/0:22,0:22:60.14:0,60,1517	0/0:23,0:23:65.88:0,66,1749	1/1:6,11:17:48:752,48,0	0/0:16,0:16:38.27:0,38,1044	1/1:9,4:13:32.91:382,33,0	0/0:13,0:13:36.09:0,36,950	0/0:17,0:17:48.13:0,48,1400	0/0:26,0:26:68.42:0,68,1698	1/1:7,3:10:12.91:206,13,0	0/0:11,0:11:30.07:0,30,798	0/0:38,0:38:99:0,111,2700	0/0:8,0:8:21.06:0,21,577	1/1:7,5:12:28.23:398,28,0	0/0:15,0:15:41.86:0,42,1187	0/0:11,0:11:24.08:0,24,562	0/0:18,0:18:54.18:0,54,1502	0/1:19,12:31:19.35:994,0,19	0/0:25,0:25:72.70:0,73,1889	1/1:12,3:15:20.98:297,21,0
chr10	88118864	.	TAAA	T	4098.08	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=9.241;DP=541;FS=1.296;HRun=13;HaplotypeScore=110.0428;InbreedingCoeff=0.9776;MQ=70.05;MQ0=2;MQRankSum=-2.817;QD=25.45;ReadPosRankSum=5.147;VQSLOD=2.8280;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:15:32.33:195,32,0	0/0:4,0:17:32.88:0,33,495	0/0:34,0:15:18.04:0,18,269	0/0:30,0:13:15.35:0,15,179	0/0:24,0:26:63.16:0,63,1049	1/1:5,20:26:49.61:580,50,0	1/1:2,12:14:30.08:365,30,0	0/0:30,0:32:72.08:0,72,1018	0/0:8,0:10:27.03:0,27,414	0/0:9,0:26:54.15:0,54,732	0/0:13,0:21:51.11:0,51,676	1/1:4,14:18:42.03:492,42,0	0/0:16,0:17:45.10:0,45,691	1/1:4,11:15:27.88:342,28,0	0/0:17,0:18:48.08:0,48,721	0/0:11,0:12:33.08:0,33,531	0/0:11,0:23:54.14:0,54,737	1/1:1,10:11:27.07:328,27,0	0/0:14,0:16:36.07:0,36,564	0/0:23,0:23:60.14:0,60,979	0/0:3,0:4:9.01:0,9,138	1/1:3,12:15:35.93:399,36,0	0/0:14,0:15:33.53:0,34,528	0/0:2,0:3:9.03:0,9,158	0/0:22,0:24:60.17:0,60,1043	1/1:4,25:30:35.32:849,35,0	0/0:24,0:27:73.44:0,73,1239	1/1:2,15:17:45.11:547,45,0
chr10	88119648	.	C	CAAAA	4352.19	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=3.467;DP=534;FS=13.109;HRun=13;HaplotypeScore=110.6513;InbreedingCoeff=0.9330;MQ=69.61;MQ0=5;MQRankSum=-2.322;QD=24.18;ReadPosRankSum=-5.699;VQSLOD=0.7021;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:37:64.53:713,65,0	0/0:11,0:11:17.90:0,18,228	0/0:35,0:17:11.67:0,12,213	0/0:22,0:15:10.11:0,10,131	0/0:17,0:19:28:0,28,330	1/1:14,7:26:33.02:553,33,0	1/1:1,4:7:12.04:236,12,0	0/0:28,0:31:53.16:0,53,638	0/0:20,0:21:54.03:0,54,669	0/0:19,0:20:43.11:0,43,525	0/0:13,0:16:40.13:0,40,461	1/1:13,4:18:24.08:499,24,0	0/0:14,0:14:26.82:0,27,328	1/1:15,3:19:17.99:313,18,0	0/0:11,0:14:17.57:0,18,183	0/0:13,0:14:25.11:0,25,307	0/0:13,0:14:40.33:0,40,482	1/1:9,1:14:15.03:246,15,0	0/0:12,0:14:3.56:0,4,266	0/0:19,0:22:26.33:0,26,312	0/0:13,0:17:28.04:0,28,316	1/1:11,5:19:33.11:646,33,0	0/0:13,0:14:26.75:0,27,300	0/0:17,0:20:27.48:0,27,522	0/0:19,0:21:37.82:0,38,450	1/1:16,7:31:61.91:1062,62,0	0/0:10,0:11:23.88:0,24,269	1/1:2,1:7:5.93:84,6,0
chr10	88119795	.	A	AT	372.15	PASS	AB=0.924;AC=6;AF=0.107;AN=56;BaseQRankSum=6.140;DP=454;FS=0.643;HRun=3;HaplotypeScore=53.9931;InbreedingCoeff=0.0545;MQ=66.76;MQ0=4;MQRankSum=0.334;QD=3.80;ReadPosRankSum=0.185;VQSLOD=0.1488;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:3,15:18:9.04:381,0,9	0/0:8,0:8:21.05:0,21,237	0/0:26,0:8:14.42:0,14,88	0/1:29,0:13:33.75:34,0,42	0/0:15,0:15:33.05:0,33,357	0/1:18,0:18:4.52:32,0,5	0/1:9,0:9:12.97:13,0,23	0/0:17,0:16:45.07:0,45,475	0/0:8,0:8:24.04:0,24,263	0/0:23,0:23:56.33:0,56,604	0/0:21,0:21:54.12:0,54,596	0/0:12,0:12:1.26:0,1,70	0/0:14,0:14:36.01:0,36,378	0/1:12,0:12:3.27:25,0,3	0/0:11,0:11:16.38:0,16,173	0/0:11,0:11:33.06:0,33,354	0/0:26,0:25:64.46:0,64,698	0/0:22,0:22:1.67:0,2,158	0/0:13,0:12:33.07:0,33,362	0/0:25,0:25:75.16:0,75,828	0/0:13,0:13:36.02:0,36,369	0/1:12,0:12:3.80:4,0,27	0/0:23,0:23:59.87:0,60,607	0/0:14,0:14:30.09:0,30,356	0/0:15,0:15:42.07:0,42,444	0/0:19,0:19:11.65:0,12,183	0/0:15,0:15:42.11:0,42,478	0/0:4,0:3:3.76:0,4,45
chr10	88119798	.	T	TA	1676.27	PASS	AB=0.819;AC=19;AF=0.339;AN=56;BaseQRankSum=-2.018;DP=457;FS=0.000;HRun=13;HaplotypeScore=49.0644;InbreedingCoeff=0.6182;MQ=68.30;MQ0=4;MQRankSum=-0.743;QD=8.64;ReadPosRankSum=-0.635;VQSLOD=1.9192;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:15.77:157,16,0	0/0:7,0:8:9.08:0,9,115	0/1:29,0:10:0.46:0,0,23	0/1:29,0:14:20.07:23,0,20	0/0:12,0:12:26.73:0,27,185	1/1:1,16:17:42.05:390,42,0	1/1:1,7:9:17.86:154,18,0	0/0:18,0:18:32.59:0,33,222	0/0:8,0:8:17.81:0,18,123	0/0:25,0:25:50.39:0,50,343	0/0:22,0:22:44.52:0,45,307	0/1:3,7:11:2.61:108,0,3	0/0:14,0:14:26.68:0,27,182	1/1:2,12:14:27.03:251,27,0	0/1:7,1:10:10.97:11,0,69	0/0:11,0:11:20.77:0,21,142	0/0:23,1:24:24.67:0,25,300	0/1:7,12:20:16.86:276,0,17	0/0:14,0:13:32.69:0,33,224	0/0:27,0:27:62.42:0,62,430	0/0:11,0:12:22.79:0,23,147	1/1:1,9:10:9.45:230,9,0	0/0:24,0:25:49.34:0,49,322	0/0:11,0:11:29.76:0,30,206	0/0:14,0:16:36.72:0,37,235	1/1:6,14:21:14.47:240,14,0	0/0:15,0:15:38.62:0,39,266	1/1:4,0:3:3:28,3,0
chr10	88119950	.	A	AC	6883.37	PASS	AB=0.853;AC=19;AF=0.339;AN=56;BaseQRankSum=-13.183;DP=524;FS=1.546;HRun=2;HaplotypeScore=48.7504;InbreedingCoeff=0.7949;MQ=67.22;MQ0=0;MQRankSum=1.026;QD=36.04;ReadPosRankSum=3.022;VQSLOD=5.2101;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:81.27:1166,81,0	0/0:8,0:8:24.05:0,24,282	0/1:5,0:5:15.94:23,0,16	0/1:7,0:8:1.25:1,0,150	0/0:26,0:26:78.22:0,78,941	1/1:1,27:28:78.26:1123,78,0	1/1:0,13:13:36.12:518,36,0	0/0:33,0:33:90.27:0,90,1096	0/0:16,0:16:45.14:0,45,558	0/0:29,0:29:87.27:0,87,1065	0/0:19,0:19:54.17:0,54,669	1/1:3,14:17:42.14:604,42,0	0/0:17,0:17:48.14:0,48,583	1/1:0,13:13:36.12:518,36,0	0/0:17,0:17:51.13:0,51,605	0/0:18,0:18:51.16:0,51,632	0/0:16,0:16:48.15:0,48,594	0/1:4,15:19:23.21:596,0,23	0/0:20,0:20:60.17:0,60,730	0/0:35,0:35:99:0,99,1214	0/0:10,0:10:27.07:0,27,321	1/1:0,20:20:57.19:819,57,0	0/0:18,0:18:54.16:0,54,658	0/0:9,0:9:24.08:0,24,297	0/0:19,0:19:57.17:0,57,696	1/1:3,26:29:44.07:1082,44,0	0/0:23,0:23:66.19:0,66,805	1/1:2,9:11:33.05:432,33,0
chr10	88120620	.	A	AT	168.72	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.888;DP=371;FS=3.934;HRun=4;HaplotypeScore=99.5071;InbreedingCoeff=0.6777;MQ=86.45;MQ0=0;MQRankSum=-0.909;QD=15.34;ReadPosRankSum=-2.254;VQSLOD=2.6728;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:11:21.03:261,21,0	0/0:9,0:9:24.07:0,24,270	0/0:19,0:19:48.46:0,48,509	0/0:17,0:17:36.44:0,36,375	0/0:20,0:20:32.59:0,33,373	0/0:18,0:18:45.13:0,45,510	0/0:9,0:9:24.07:0,24,272	0/0:24,0:24:60.16:0,60,671	0/0:12,0:12:24.06:0,24,272	0/0:12,0:12:36.10:0,36,408	0/0:22,0:22:57.16:0,57,645	0/0:7,0:7:18.05:0,18,204	0/0:12,0:12:36.10:0,36,407	0/0:10,0:10:24.07:0,24,272	0/0:17,0:17:42.12:0,42,473	0/0:7,0:7:15.03:0,15,160	0/0:14,0:13:24.07:0,24,272	0/0:5,0:5:12.03:0,12,136	0/0:8,0:8:24.06:0,24,264	0/0:33,0:33:81.23:0,81,912	0/0:5,0:5:6.02:0,6,68	0/0:11,0:11:30.08:0,30,334	0/0:21,0:21:51.14:0,51,572	0/0:6,0:6:6.01:0,6,66	0/0:12,0:12:28.53:0,29,337	0/0:16,0:16:36.10:0,36,408	0/0:13,0:13:33.08:0,33,363	0/0:1,0:1:3.01:0,3,34
chr10	88120638	.	T	TACAAATCAGAGAGCATGAACC	1613.53	PASS	AB=0.657;AC=10;AF=0.833;AN=12;BaseQRankSum=-0.594;DP=16;FS=10.212;HRun=0;HaplotypeScore=38.1737;MQ=212.77;MQ0=0;MQRankSum=-1.444;QD=107.57;ReadPosRankSum=-0.934;VQSLOD=1.3748;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:2,0:6:7.57:673,0,8	0/1:3,1:5:5.64:860,0,6	./.	./.	./.	1/1:1,0:1:3:27,3,0	./.	1/1:1,0:1:3:28,3,0	./.	./.	1/1:1,0:1:3.01:50,3,0	./.	./.	./.	1/1:1,0:1:3.01:49,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	88124552	.	TG	T	566.46	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.907;DP=649;FS=12.811;HRun=2;HaplotypeScore=63.6619;InbreedingCoeff=0.9448;MQ=92.91;MQ0=0;MQRankSum=-3.785;QD=29.81;ReadPosRankSum=0.468;VQSLOD=1.9250;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:51.17:661,51,0	0/0:11,0:11:33.08:0,33,472	0/0:34,0:34:93.27:0,93,1291	0/0:22,0:22:63.17:0,63,888	0/0:26,0:26:78.25:0,78,1147	0/0:33,0:33:99:0,99,1460	0/0:19,0:19:57.18:0,57,833	0/0:33,0:33:99:0,99,1445	0/0:32,0:32:96.31:0,96,1419	0/0:22,0:22:60.20:0,60,897	0/0:20,0:20:57.18:0,57,834	0/0:34,0:34:99:0,102,1525	0/0:28,0:28:84.28:0,84,1258	0/0:20,0:20:60.17:0,60,858	0/0:27,0:27:81.26:0,81,1191	0/0:21,0:21:60.20:0,60,899	0/0:15,0:15:45.15:0,45,673	0/0:20,0:20:60.20:0,60,899	0/0:21,0:21:63.19:0,63,901	0/0:24,0:24:69.16:0,69,1033	0/0:34,0:34:99:0,99,1438	0/0:11,0:11:33.10:0,33,476	0/0:21,0:21:63.21:0,63,939	0/0:23,0:23:69.22:0,69,1011	0/0:20,0:20:57.19:0,57,852	0/0:26,0:26:75.23:0,75,1086	0/0:30,0:30:90.29:0,90,1322	0/0:3,0:3:9.03:0,9,135
chr10	88124682	.	T	TCAAAACAAAA	7184.80	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=4.787;DP=688;FS=0.867;HRun=0;HaplotypeScore=207.2461;InbreedingCoeff=0.9590;MQ=58.75;MQ0=2;MQRankSum=-7.234;QD=24.03;ReadPosRankSum=-1.894;VQSLOD=3.8076;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:47.53:607,48,0	1/1:8,0:8:8.71:47,9,0	0/0:28,0:22:18.06:0,18,433	0/0:23,0:11:13.01:0,13,181	0/0:20,0:20:45.14:0,45,1278	1/1:37,0:37:42.14:1968,42,0	1/1:17,0:17:9.01:155,9,0	0/0:31,0:31:36.08:0,36,745	0/0:27,0:27:54.18:0,54,1552	1/1:32,0:32:42.85:239,43,0	1/1:21,0:20:20.55:163,21,0	1/1:28,0:28:33.11:1554,33,0	0/0:23,0:23:39.12:0,39,1088	1/1:21,0:21:15.05:706,15,0	0/0:28,0:28:45.15:0,45,1340	0/0:24,0:24:48.15:0,48,1351	1/1:20,0:20:34.98:199,35,0	1/1:11,3:15:6.02:252,6,0	0/0:18,0:17:24.08:0,24,648	0/0:30,0:30:45.15:0,45,1287	0/0:23,0:23:48.15:0,48,1323	1/1:20,0:20:18.06:795,18,0	0/0:33,0:33:60.21:0,60,1695	0/0:30,0:30:33.11:0,33,1228	0/0:25,0:25:57.20:0,57,1700	1/1:37,0:37:52.34:377,52,0	0/0:26,0:26:51.17:0,51,1439	1/1:11,0:11:17.80:122,18,0
chr10	88124713	.	C	CAAAACAAAAT	14423.02	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=6.152;DP=686;FS=4.573;HRun=0;HaplotypeScore=192.3819;InbreedingCoeff=0.9973;MQ=65.70;MQ0=0;MQRankSum=-6.513;QD=48.89;ReadPosRankSum=0.138;VQSLOD=4.5609;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:35:92.41:1042,92,0	1/1:2,0:9:23.74:244,24,0	0/0:26,0:20:43.13:0,43,849	0/0:26,0:20:48.55:0,49,592	0/0:23,0:23:63.11:0,63,1590	1/1:9,22:33:69.24:3341,69,0	1/1:15,0:15:40.29:609,40,0	0/0:30,0:30:84.08:0,84,1265	0/0:29,0:29:84.14:0,84,1963	1/1:5,0:38:99:1424,111,0	1/1:3,0:15:32.90:428,33,0	1/1:5,14:23:48.16:2258,48,0	0/0:17,0:17:48.10:0,48,1278	1/1:5,12:23:27.09:1265,27,0	0/0:30,0:30:84.07:0,84,1812	0/0:24,0:24:72.14:0,72,1743	1/1:1,0:24:39.11:512,39,0	1/1:8,1:9:17.94:481,18,0	0/0:26,0:25:59.38:0,59,1039	0/0:22,0:22:63.07:0,63,1568	0/0:21,0:21:60.15:0,60,1588	1/1:5,14:21:50.66:1402,51,0	0/0:26,0:26:78.17:0,78,2021	0/0:29,0:29:73:0,73,1556	0/0:29,0:29:87.14:0,87,2135	1/1:3,0:36:99:1177,99,0	0/0:33,0:33:81.05:0,81,1849	1/1:0,0:14:18.06:242,18,0
chr10	88126058	.	A	AT	4968.19	PASS	AB=0.625;AC=25;AF=0.446;AN=56;BaseQRankSum=6.162;DP=545;FS=0.683;HRun=8;HaplotypeScore=62.4087;InbreedingCoeff=0.9346;MQ=88.78;MQ0=0;MQRankSum=-2.369;QD=20.53;ReadPosRankSum=2.037;VQSLOD=4.9726;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:80.21:555,80,0	0/1:4,6:10:9.41:155,0,9	0/0:24,0:24:54.02:0,54,492	0/0:17,0:17:34.52:0,35,308	0/0:27,0:27:72.01:0,72,653	1/1:24,0:24:59.23:393,59,0	1/1:12,0:12:29.56:189,30,0	0/0:34,0:34:84.03:0,84,769	0/0:17,0:17:41.61:0,42,367	1/1:1,18:19:54.16:623,54,0	1/1:4,20:24:60.18:692,60,0	1/1:26,0:26:68:436,68,0	0/0:20,0:20:57.03:0,57,522	1/1:9,0:9:23.71:158,24,0	0/0:20,0:20:57.02:0,57,517	0/0:19,0:19:51.02:0,51,467	1/1:1,15:16:45.13:519,45,0	1/1:14,0:14:38.48:253,38,0	0/0:13,0:13:30.01:0,30,275	0/0:23,0:23:60.01:0,60,545	0/0:16,0:16:45.02:0,45,412	1/1:23,0:23:62.12:401,62,0	0/0:18,0:18:51.03:0,51,466	0/0:12,0:12:33.01:0,33,302	0/0:20,0:20:60.02:0,60,545	1/1:20,2:22:61.60:392,62,0	0/0:23,0:23:69.04:0,69,632	1/1:12,0:12:29.69:202,30,0
chr10	88126060	.	T	TA	6987.33	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=-6.644;DP=547;FS=0.662;HRun=0;HaplotypeScore=55.2041;InbreedingCoeff=0.8504;MQ=87.88;MQ0=0;MQRankSum=-8.105;QD=28.17;ReadPosRankSum=3.817;VQSLOD=5.4075;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:81.27:1183,81,0	0/1:10,0:10:12.59:13,0,97	0/0:24,0:24:65.38:0,65,832	0/0:15,0:15:41.07:0,41,536	0/0:27,0:27:81.24:0,81,1079	1/1:1,25:26:60.20:876,60,0	1/1:1,12:13:30.10:439,30,0	0/0:34,0:34:99:0,99,1315	0/0:16,0:16:48.14:0,48,634	1/1:20,0:20:12.13:77,12,0	0/1:24,0:24:50.36:91,0,50	1/1:0,25:25:69.23:1010,69,0	0/0:19,0:19:57.19:0,57,796	1/1:0,8:8:24.08:351,24,0	0/0:19,0:19:57.19:0,57,796	0/0:20,0:20:57.17:0,57,764	1/1:17,0:17:14.31:96,14,0	1/1:1,13:14:42.01:585,42,0	0/0:12,0:12:36.10:0,36,471	0/0:23,0:23:66.20:0,66,891	0/0:16,0:16:45.15:0,45,628	1/1:0,24:24:69.08:957,69,0	0/0:18,0:18:51.17:0,51,711	0/0:13,0:13:39.08:0,39,507	0/0:20,0:20:60.20:0,60,837	1/1:2,20:22:64.63:873,65,0	0/0:23,0:23:69.23:0,69,963	1/1:0,12:12:30.10:439,30,0
chr10	88126150	.	T	TA	1931.52	PASS	AB=0.909;AC=9;AF=0.161;AN=56;BaseQRankSum=-8.343;DP=604;FS=4.396;HRun=10;HaplotypeScore=62.1543;InbreedingCoeff=0.8542;MQ=78.81;MQ0=0;MQRankSum=-0.265;QD=17.56;ReadPosRankSum=0.333;VQSLOD=4.1951;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:59.30:0,59,476	1/1:2,4:6:12.03:128,12,0	0/0:15,0:16:33.91:0,34,244	0/0:14,0:14:15.93:0,16,124	0/0:26,0:27:61.93:0,62,498	0/0:29,0:29:65.90:0,66,541	0/0:15,0:15:32.94:0,33,271	0/0:35,0:35:74.84:0,75,613	0/0:20,0:20:47.92:0,48,394	1/1:3,23:26:66.14:694,66,0	1/1:6,16:22:48.12:512,48,0	0/0:21,0:21:56.93:0,57,468	0/0:32,0:32:77.87:0,78,640	0/0:14,0:14:41.95:0,42,345	0/0:26,0:26:68.91:0,69,566	0/0:18,0:18:47.92:0,48,394	1/1:1,25:26:69.17:736,69,0	0/0:16,0:16:38.93:0,39,320	0/0:25,0:25:30.91:0,31,460	0/0:27,0:28:67.91:0,68,544	0/0:17,0:17:35.93:0,36,296	0/0:15,0:16:37.99:0,38,301	0/0:18,0:18:20.88:0,21,320	0/0:28,0:28:65.59:0,66,542	0/0:29,0:29:71.90:0,72,591	0/1:26,3:30:25.04:25,0,425	0/0:16,0:16:38.94:0,39,320	0/0:8,0:8:20.96:0,21,172
chr10	88126831	.	A	AT	7943.22	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-4.290;DP=617;FS=0.660;HRun=8;HaplotypeScore=60.5823;InbreedingCoeff=0.9294;MQ=77.10;MQ0=0;MQRankSum=0.146;QD=26.66;ReadPosRankSum=3.745;VQSLOD=5.4368;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:34:81.24:935,81,0	1/1:3,9:12:27.08:312,27,0	0/0:12,0:12:23.99:0,24,215	0/1:16,0:16:16.30:16,0,165	0/0:25,0:25:63.03:0,63,577	1/1:2,22:24:66.20:762,66,0	1/1:1,14:15:39.12:450,39,0	0/0:36,0:36:90.01:0,90,814	0/0:16,0:16:36.01:0,36,329	1/1:10,26:36:78.23:900,78,0	1/1:1,14:15:42.12:483,42,0	1/1:1,19:20:57.17:656,57,0	0/0:31,0:31:84.04:0,84,769	1/1:1,14:15:39.12:450,39,0	0/0:27,0:27:72.03:0,72,659	0/0:19,0:18:45.02:0,45,412	1/1:2,16:17:33.10:381,33,0	1/1:1,11:12:33.10:381,33,0	0/0:22,0:22:57.03:0,57,521	0/0:20,0:20:60.03:0,60,549	0/0:11,0:10:27.01:0,27,247	1/1:4,24:28:66.07:729,66,0	0/0:25,0:25:63.01:0,63,571	0/0:24,0:24:72.03:0,72,654	0/0:25,0:25:65.99:0,66,593	1/1:1,32:33:96.29:1108,96,0	0/0:26,0:25:72:0,72,649	1/1:7,13:20:33.10:381,33,0
chr10	88127842	.	A	AT	2012.50	PASS	AB=0.835;AC=17;AF=0.304;AN=56;BaseQRankSum=-8.747;DP=341;FS=5.494;HRun=10;HaplotypeScore=38.3952;InbreedingCoeff=0.5457;MQ=78.65;MQ0=0;MQRankSum=0.786;QD=16.50;ReadPosRankSum=-0.299;VQSLOD=3.3137;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:68.87:0,69,559	0/0:3,0:4:11.01:0,11,76	0/1:6,0:6:13.83:14,0,19	0/1:9,0:9:26.27:28,0,26	0/0:8,0:8:20.96:0,21,172	1/1:1,4:5:12.03:128,12,0	0/1:9,16:26:22.94:380,0,23	0/0:19,0:19:32.93:0,33,269	0/0:4,0:4:11.99:0,12,99	0/0:12,1:13:0.95:0,1,211	0/1:9,0:9:1.83:2,0,148	1/1:0,10:10:27.07:288,27,0	0/0:6,0:6:11.58:0,12,84	1/1:3,9:12:24.06:255,24,0	0/0:5,0:5:14.98:0,15,123	0/0:7,0:7:17.97:0,18,148	0/0:33,0:34:85.91:0,86,696	1/1:0,26:26:69.17:734,69,0	0/0:20,0:20:38.93:0,39,320	0/0:6,0:6:17.97:0,18,145	0/0:18,0:18:41.90:0,42,341	1/1:1,8:9:15.04:160,15,0	0/0:3,0:3:5.99:0,6,49	0/0:29,0:29:83.86:0,84,684	0/0:11,0:10:29.95:0,30,246	0/1:2,6:8:3.77:145,0,4	0/0:7,0:7:20.98:0,21,172	1/1:0,2:2:6.02:64,6,0
chr10	88129032	.	GT	G	1247.64	PASS	AB=0.839;AC=33;AF=0.589;AN=56;BaseQRankSum=9.535;DP=601;FS=4.198;HRun=17;HaplotypeScore=84.1172;InbreedingCoeff=0.2968;MQ=73.84;MQ0=3;MQRankSum=-2.436;QD=2.90;ReadPosRankSum=4.024;VQSLOD=-0.1655;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,21:33:54.32:286,54,0	1/1:1,4:7:7.84:39,8,0	0/0:49,0:22:8.22:0,8,121	0/0:18,0:10:6.37:0,6,39	0/1:16,5:22:17.15:17,0,220	1/1:3,0:16:22.37:63,22,0	1/1:4,0:22:30.51:86,31,0	0/1:26,1:29:4.01:4,0,214	0/1:9,6:15:41.97:42,0,54	1/1:12,13:28:1.13:168,1,0	0/1:10,3:15:2.43:70,0,2	1/1:4,0:15:20.51:58,21,0	0/1:20,4:24:10.66:11,0,278	1/1:3,0:19:22.36:63,22,0	0/0:20,2:22:34.05:0,34,353	0/0:18,7:26:7:0,7,254	1/1:5,15:28:18.74:156,19,0	1/1:1,0:9:18.32:52,18,0	0/0:21,0:24:44.37:0,44,308	0/1:21,8:29:17.28:17,0,227	0/1:10,1:11:19.62:20,0,49	1/1:5,0:16:22.36:63,22,0	0/0:19,0:19:10.66:0,11,248	0/0:11,1:12:6.51:0,7,169	0/1:17,1:19:19.30:19,0,120	1/1:6,0:23:36.15:102,36,0	0/1:19,2:22:11.93:12,0,201	1/1:9,0:25:30.45:86,30,0
chr10	88129197	.	GGGTAGAGGGCACAGTGCTCTGA	G	11587.56	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.051;DP=695;FS=16.015;HRun=0;HaplotypeScore=387.5417;InbreedingCoeff=0.9481;MQ=88.87;MQ0=0;MQRankSum=-12.019;QD=93.45;ReadPosRankSum=5.504;VQSLOD=3.0771;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,12291	0/0:11,0:11:33.11:0,33,3360	0/0:26,0:26:72.22:0,72,4609	0/0:30,0:29:84.26:0,84,5781	0/0:21,0:21:63.22:0,63,6373	1/1:2,11:13:21.07:1287,21,0	1/1:10,12:22:21.07:1287,21,0	0/0:45,0:44:99:0,129,10661	0/0:27,0:27:81.28:0,81,8067	0/0:24,0:24:69.24:0,69,6309	0/0:20,0:20:54.16:0,54,4973	1/1:0,20:20:42.14:2574,42,0	0/0:31,0:31:90.28:0,90,8181	1/1:2,18:20:45.15:2758,45,0	0/0:27,0:27:78.27:0,78,7315	0/0:19,0:19:54.19:0,54,5196	0/0:38,0:38:99:0,111,10290	1/1:5,6:10:3.01:184,3,0	0/0:22,0:22:63.22:0,63,5267	0/0:20,0:20:57.18:0,57,5002	0/0:55,0:55:99:0,160,15376	1/1:2,9:11:15.05:919,15,0	0/0:24,0:24:72.25:0,72,6646	0/0:28,0:28:84.29:0,84,8086	0/0:31,0:31:93.26:0,93,8626	1/1:3,14:17:42.13:2211,42,0	0/0:25,0:25:75.26:0,75,6301	1/1:4,6:10:6.02:368,6,0
chr10	88130683	.	A	ATT	3065.36	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.583;DP=577;FS=0.965;HRun=9;HaplotypeScore=69.3476;InbreedingCoeff=0.9793;MQ=64.52;MQ0=0;MQRankSum=2.019;QD=31.93;ReadPosRankSum=0.522;VQSLOD=3.8235;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.15:0,66,702	1/1:2,9:11:24.04:343,24,0	0/0:10,0:10:21.05:0,21,218	0/0:8,0:7:9:0,9,93	0/0:35,0:35:87.14:0,87,905	0/0:22,0:22:60.11:0,60,629	0/0:17,0:17:42.09:0,42,447	0/0:35,0:35:69.10:0,69,734	0/0:17,0:17:42.10:0,42,447	1/1:2,18:22:54.18:829,54,0	1/1:3,24:28:74.65:1057,75,0	0/0:18,0:18:45.03:0,45,449	0/0:16,0:16:45.10:0,45,479	0/0:15,0:15:33.07:0,33,351	0/0:24,0:25:60.05:0,60,683	0/0:21,0:21:57.09:0,57,595	1/1:2,31:35:66.22:997,66,0	0/0:25,0:25:72.08:0,72,736	0/0:17,0:17:39.07:0,39,415	0/0:21,0:21:48.07:0,48,502	0/0:8,0:8:18.03:0,18,192	0/0:22,0:22:57.13:0,57,606	0/0:27,0:27:75.14:0,75,782	0/0:10,0:10:24.02:0,24,247	0/0:21,0:21:48.05:0,48,492	0/0:20,0:20:54.12:0,54,568	0/0:28,0:27:81.16:0,81,850	0/0:17,0:17:45.11:0,45,479
chr10	88131245	.	G	GGT	6377	PASS	AB=0.607;AC=36;AF=0.643;AN=56;BaseQRankSum=1.028;DP=813;FS=2.580;HRun=0;HaplotypeScore=212.2306;InbreedingCoeff=0.6228;MQ=53.31;MQ0=2;MQRankSum=-0.913;QD=11.11;ReadPosRankSum=-0.130;VQSLOD=4.2261;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:5.47:45,5,0	0/1:4,10:14:3.08:438,0,3	0/0:33,0:18:23.86:0,24,250	0/0:24,0:13:18.28:0,18,144	1/1:29,1:34:8.51:57,9,0	0/0:30,0:32:60.01:0,60,700	0/0:21,0:23:0.32:0,0,284	1/1:42,0:42:22.60:158,23,0	1/1:19,0:30:22.64:177,23,0	1/1:14,20:34:35.94:982,36,0	0/1:13,17:30:12.12:313,0,12	0/0:28,0:29:36.10:0,36,421	0/1:12,1:32:21.29:76,0,21	0/0:33,0:34:45.14:0,45,542	1/1:24,0:34:26.82:216,27,0	1/1:26,0:34:1.30:69,1,0	1/1:5,19:24:54.13:826,54,0	0/0:26,0:28:28.52:0,29,678	1/1:18,0:15:9.86:74,10,0	1/1:24,0:29:14.92:118,15,0	1/1:21,0:21:1.55:4,2,0	0/0:36,0:36:66.19:0,66,783	0/1:7,0:23:0.02:0,0,0	1/1:22,0:28:12.91:99,13,0	1/1:9,2:30:9.01:99,9,0	1/1:13,33:46:76.64:1543,77,0	1/1:13,0:17:9.48:120,9,0	1/1:3,23:26:60.20:963,60,0
chr10	88131370	.	A	ATG	1220.07	PASS	AB=0.871;AC=26;AF=0.520;AN=50;BaseQRankSum=6.406;DP=553;FS=6.832;HRun=0;HaplotypeScore=145.0679;InbreedingCoeff=0.4186;MQ=44.58;MQ0=10;MQRankSum=-2.638;QD=5.15;ReadPosRankSum=1.633;VQSLOD=2.5249;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:0:0,0,0	./.	0/0:47,0:24:47.87:0,48,488	0/0:62,0:25:45:0,45,529	1/1:7,2:9:6:71,6,0	0/0:32,0:31:3.81:0,4,184	0/0:30,0:30:29.69:0,30,238	1/1:25,0:23:15.02:180,15,0	1/1:6,2:8:2.62:47,3,0	./.	./.	0/0:35,0:35:25.15:0,25,369	1/1:8,4:12:14.93:180,15,0	0/0:42,0:42:8.24:0,8,235	0/0:8,8:16:2.46:0,2,11	0/1:0,10:10:0.12:0,0,0	0/1:4,0:4:0.30:0,0,0	0/1:18,0:17:32.29:32,0,84	1/1:4,0:2:3:26,3,0	0/1:5,3:8:6.05:44,0,6	1/1:23,9:30:9:127,9,0	0/0:33,0:32:14.63:0,15,164	1/1:5,5:10:18.05:275,18,0	1/1:15,16:31:12.47:136,12,0	1/1:3,6:9:0.89:3,1,0	0/1:32,0:32:99:129,0,212	1/1:5,4:9:8.64:96,9,0	0/1:15,0:15:33.24:33,0,126
chr10	88131380	.	C	CTG	3428.24	PASS	AB=0.933;AC=35;AF=0.625;AN=56;BaseQRankSum=3.480;DP=486;FS=0.710;HRun=0;HaplotypeScore=125.9948;InbreedingCoeff=0.5022;MQ=41.50;MQ0=6;MQRankSum=3.806;QD=10.05;ReadPosRankSum=3.889;VQSLOD=3.4067;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:0:0,0,0	0/0:1,0:1:0:0,0,0	0/0:48,0:26:31.27:0,31,521	0/0:61,0:27:41:0,41,493	0/1:6,0:6:0:1,0,0	1/1:12,16:27:29.36:317,29,0	1/1:16,13:29:20.79:195,21,0	0/1:8,0:6:0:0,0,0	1/1:5,0:5:3.83:21,4,0	1/1:1,0:1:3.01:39,3,0	0/0:6,0:6:0:0,0,0	1/1:15,17:32:20.93:209,21,0	1/1:10,1:9:11.89:112,12,0	1/1:14,25:39:16.47:150,16,0	0/0:8,0:8:2.46:0,2,11	0/1:9,0:9:0.12:0,0,0	0/1:2,2:4:0:0,0,0	1/1:9,10:19:18.96:445,19,0	0/0:1,0:1:1.82:0,2,5	0/1:6,0:6:5.27:12,0,5	1/1:22,0:20:2.90:25,3,0	1/1:11,25:35:5.94:74,6,0	1/1:8,0:8:10.80:78,11,0	1/1:21,0:21:6.81:46,7,0	0/0:8,0:8:1.40:0,1,9	1/1:15,20:35:87.09:1246,87,0	1/1:7,0:7:2.23:25,2,0	1/1:6,9:15:35.96:434,36,0
chr10	88131386	.	GTATATA	G	1230.14	PASS	AB=0.969;AC=33;AF=0.611;AN=54;BaseQRankSum=-2.105;DP=449;FS=33.053;HRun=0;HaplotypeScore=146.6024;InbreedingCoeff=0.0669;MQ=40.63;MQ0=5;MQRankSum=6.153;QD=3.79;ReadPosRankSum=-3.015;VQSLOD=0.3738;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:1.10:0,1,2	0/1:2,0:2:0:0,0,0	0/0:40,0:24:54.79:0,55,1653	0/0:54,0:25:57.12:0,57,1683	0/0:4,2:6:0.94:0,1,3	0/1:28,0:27:3.97:116,0,4	1/1:29,0:29:15.32:122,15,0	./.	1/1:3,1:5:5.99:73,6,0	0/1:2,0:2:9.17:11,0,9	0/1:6,0:6:0:0,0,0	0/1:29,0:29:4.21:126,0,4	0/1:6,4:8:37:87,0,37	0/1:36,0:36:31.80:91,0,32	1/1:5,2:7:2.17:31,2,0	0/0:4,4:8:0.23:0,0,1	0/1:3,0:3:0.09:0,0,0	0/1:17,0:18:51.90:52,0,230	1/1:1,0:1:2.98:21,3,0	1/1:4,3:7:7.77:69,8,0	1/1:13,5:17:4.89:34,5,0	1/1:32,0:32:3.88:26,4,0	1/1:7,0:7:10.84:142,11,0	1/1:4,14:18:4:104,4,0	1/1:4,3:7:0.53:9,1,0	0/1:36,0:36:71.93:72,0,710	1/1:5,3:9:7.34:97,7,0	0/1:15,0:15:83.86:84,0,199
chr10	88131416	.	GTGAGTGTGTGTA	G	405.92	PASS	AB=1.000;AC=16;AF=0.320;AN=50;BaseQRankSum=2.559;DP=503;FS=4.152;HRun=0;HaplotypeScore=208.5829;InbreedingCoeff=0.4973;MQ=47.30;MQ0=8;MQRankSum=-1.913;QD=4.56;ReadPosRankSum=-1.359;VQSLOD=2.2920;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:10.76:0,11,297	0/0:6,0:6:5.87:0,6,246	0/0:56,0:24:58.47:0,58,1620	0/0:53,0:27:70.62:0,71,2189	0/0:0,17:17:3.28:0,3,6	0/0:16,0:14:13.19:0,13,406	0/0:22,0:22:18.33:0,18,546	./.	1/1:2,0:2:3.01:68,3,0	0/0:20,0:20:57.54:0,58,1458	0/0:15,0:15:20.92:0,21,693	0/0:28,0:28:32.78:0,33,975	0/1:4,0:4:49.96:50,0,70	0/0:35,0:35:22.39:0,22,685	1/1:10,0:10:3.01:47,3,0	1/1:3,0:3:3.01:90,3,0	0/0:10,0:10:19.15:0,19,556	0/1:21,0:19:41.46:41,0,985	1/1:1,0:1:3.01:89,3,0	0/0:0,18:18:1.38:0,1,3	1/1:20,0:18:3.90:53,4,0	0/0:31,0:31:20.85:0,21,654	./.	1/1:15,0:15:2.38:37,2,0	./.	0/0:38,0:38:99:0,99,2694	1/1:13,0:13:2.39:77,2,0	0/0:13,0:11:15.05:0,15,514
chr10	88131417	.	TGA	T	45.54	PASS	AB=1.000;AC=14;AF=0.280;AN=50;BaseQRankSum=1.676;DP=503;FS=0.000;HRun=0;HaplotypeScore=170.7750;InbreedingCoeff=0.6258;MQ=46.18;MQ0=8;MQRankSum=-0.755;QD=0.47;ReadPosRankSum=-2.468;VQSLOD=2.2036;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:10.98:0,11,149	0/0:6,0:6:6.02:0,6,115	0/0:56,0:24:41.27:0,41,739	0/0:53,0:26:51.30:0,51,864	0/1:17,0:17:0:0,0,0	0/0:16,0:14:12.84:0,13,232	0/0:21,1:22:17.61:0,18,298	./.	1/1:2,1:3:2.68:11,3,0	0/0:21,0:21:61.67:0,62,907	0/0:15,0:15:20.98:0,21,362	0/0:27,0:27:35.69:0,36,566	0/0:4,0:4:1.99:0,2,54	0/0:34,0:34:13.33:0,13,353	1/1:8,2:10:2.94:25,3,0	1/1:1,2:3:3.01:36,3,0	0/0:12,0:12:14.42:0,14,301	0/0:19,2:19:17.21:0,17,585	0/0:1,0:1:1.55:0,2,4	0/1:18,0:18:0:0,0,0	1/1:17,1:17:2.54:24,3,0	0/0:31,0:31:21.03:0,21,357	./.	1/1:11,2:13:5.34:38,5,0	./.	0/0:37,1:38:70.48:0,70,1519	1/1:13,0:13:4.56:43,5,0	0/0:13,0:11:15.05:0,15,280
chr10	88131419	.	AGTGTGTGTATGT	A	352.05	PASS	AB=0.880;AC=18;AF=0.333;AN=54;BaseQRankSum=1.698;DP=545;FS=0.976;HRun=0;HaplotypeScore=234.9501;InbreedingCoeff=0.4813;MQ=45.53;MQ0=10;MQRankSum=-2.759;QD=2.79;ReadPosRankSum=-2.642;VQSLOD=1.9406;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:10.76:0,11,390	0/0:6,0:6:5.87:0,6,293	0/0:58,0:25:60.37:0,60,1731	0/0:52,0:25:68.51:0,69,2098	0/0:17,0:17:3.28:0,3,6	0/0:15,0:13:13.19:0,13,502	0/0:23,0:23:17.97:0,18,691	1/1:3,0:3:8.97:70,9,0	1/1:9,0:9:3.95:51,4,0	0/0:24,0:23:69.16:0,69,2030	0/0:15,0:15:20.92:0,21,864	0/0:29,0:29:35.06:0,35,1252	0/1:6,0:6:40.09:40,0,63	0/0:34,0:34:31.34:0,31,881	1/1:14,0:14:3.93:23,4,0	1/1:8,0:8:3.95:73,4,0	0/0:13,0:13:22.01:0,22,736	0/1:24,0:22:26.15:26,0,1152	1/1:2,0:1:3.01:69,3,0	0/0:18,0:18:1.38:0,1,3	1/1:23,0:21:9.67:56,10,0	0/0:32,0:32:20.85:0,21,817	./.	0/1:18,0:18:15.30:25,0,15	1/1:5,0:5:0.94:1,1,0	0/0:37,0:37:99:0,105,2990	0/1:1,12:13:0.59:77,0,1	0/0:13,0:11:15.05:0,15,515
chr10	88131428	.	A	ATG	7532.86	PASS	AB=1.000;AC=43;AF=0.796;AN=54;BaseQRankSum=-0.332;DP=605;FS=0.000;HRun=0;HaplotypeScore=183.7699;InbreedingCoeff=0.3750;MQ=48.40;MQ0=12;MQRankSum=2.456;QD=16.63;ReadPosRankSum=0.871;VQSLOD=4.6923;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:23:11.65:213,12,0	1/1:0,7:7:5.89:106,6,0	0/0:53,0:18:33.70:0,34,430	0/0:51,0:21:44.44:0,44,563	0/0:17,0:17:0:0,0,0	1/1:2,16:18:12.04:213,12,0	1/1:4,20:25:18.03:319,18,0	1/1:12,0:10:6:54,6,0	0/1:14,0:14:4.33:52,0,4	1/1:2,25:26:78.27:1317,78,0	1/1:0,17:17:20.94:372,21,0	1/1:4,28:34:36.05:637,36,0	0/1:9,0:9:10.34:68,0,10	1/1:14,21:35:32.97:572,33,0	1/1:18,0:18:0.55:1,1,0	1/1:15,0:15:2.80:25,3,0	1/1:7,8:15:30.10:490,30,0	1/1:13,12:23:43.84:694,44,0	0/1:4,0:3:12.64:16,0,13	0/0:18,0:18:0:0,0,0	1/1:33,0:30:2.20:21,2,0	1/1:5,26:31:20.26:371,20,0	./.	1/1:20,0:20:6.38:70,6,0	1/1:8,0:8:3.81:27,4,0	1/1:11,27:38:99:1696,99,0	1/1:12,0:12:2.87:21,3,0	1/1:2,9:9:11.97:177,12,0
chr10	88131508	.	CTG	C	186.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.877;DP=1093;FS=16.650;HRun=0;HaplotypeScore=301.6198;InbreedingCoeff=0.9126;MQ=51.53;MQ0=19;MQRankSum=-5.043;QD=7.19;ReadPosRankSum=-3.963;VQSLOD=1.4237;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:21,5:25:7.48:269,7,0	0/0:13,0:13:32.92:0,33,484	0/0:65,0:23:45.39:0,45,816	0/0:60,0:32:81.96:0,82,1160	0/0:47,0:47:72.13:0,72,1240	0/0:34,0:34:48.16:0,48,850	0/0:40,0:39:73.60:0,74,1267	0/0:50,0:49:99:0,123,1910	0/0:43,0:43:72.11:0,72,1203	0/0:46,0:46:99:0,126,2027	0/0:35,1:36:49.19:0,49,1473	0/0:40,0:40:75.11:0,75,1268	0/0:33,0:33:84.28:0,84,1443	0/0:33,0:33:66.21:0,66,1147	0/0:44,0:44:56:0,56,941	0/0:49,0:49:99:0,102,1648	0/0:41,0:41:99:0,99,1706	0/0:31,0:29:70.12:0,70,1058	0/0:27,0:20:54.18:0,54,922	0/0:34,0:34:51.13:0,51,875	0/0:72,0:71:99:0,102,1709	0/0:39,0:39:68.81:0,69,1193	0/0:33,0:33:51.17:0,51,894	0/0:47,0:47:59.83:0,60,993	0/0:28,0:28:48.16:0,48,825	0/0:43,0:43:99:0,120,1947	0/0:23,0:23:35.98:0,36,620	0/0:16,0:14:23.87:0,24,505
chr10	88131551	.	ATGTGTGTGTG	A	4757.12	PASS	AB=0.816;AC=37;AF=0.661;AN=56;BaseQRankSum=0.158;DP=941;FS=3.482;HRun=0;HaplotypeScore=303.8979;InbreedingCoeff=0.2714;MQ=44.21;MQ0=46;MQRankSum=-4.094;QD=6.71;ReadPosRankSum=-2.281;VQSLOD=2.7564;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:19:0.14:2,0,0	0/0:7,0:12:14.51:0,15,129	0/0:54,0:14:6.02:0,6,141	0/0:66,0:17:6.02:0,6,138	1/1:27,0:45:15.58:127,16,0	1/1:10,9:18:12.43:166,12,0	1/1:20,13:30:4.25:109,4,0	0/1:59,0:53:40.66:41,0,58	1/1:20,0:32:2.92:71,3,0	0/0:28,0:42:65.17:0,65,580	0/0:23,0:27:4.71:0,5,235	1/1:15,12:27:20.75:374,21,0	1/1:13,1:21:12.01:251,12,0	1/1:13,11:24:18.13:253,18,0	1/1:17,0:35:12.90:138,13,0	1/1:20,0:36:10.36:213,10,0	0/0:25,0:26:33.04:0,33,374	0/1:27,13:40:99:150,0,166	1/1:17,7:22:21.02:463,21,0	0/1:10,17:30:6.44:469,0,6	0/1:64,0:59:84.79:230,0,85	1/1:13,24:35:41.42:639,41,0	1/1:14,0:30:15.93:98,16,0	0/1:23,1:28:34.54:166,0,35	1/1:10,1:30:0.39:88,0,0	0/1:30,1:31:99:293,0,191	0/1:7,13:20:22.72:291,0,23	1/1:5,4:8:6.02:126,6,0
chr10	88131863	.	AT	A	9903.15	PASS	AB=0.696;AC=52;AF=0.929;AN=56;BaseQRankSum=-5.052;DP=553;FS=5.687;HRun=11;HaplotypeScore=85.3329;InbreedingCoeff=0.4825;MQ=73.25;MQ0=0;MQRankSum=-3.776;QD=18.37;ReadPosRankSum=4.227;VQSLOD=5.7236;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:17:26.25:76,26,0	1/1:2,6:8:17.96:148,18,0	0/0:13,0:14:14.93:0,15,210	0/1:14,3:16:13.17:13,0,239	1/1:4,36:40:98.79:806,99,0	1/1:3,16:19:38.94:320,39,0	1/1:0,15:15:38.96:320,39,0	1/1:8,20:28:62.36:499,62,0	1/1:0,16:16:44.95:369,45,0	1/1:2,16:18:47.94:394,48,0	1/1:3,25:28:65.87:541,66,0	1/1:0,13:13:38.96:320,39,0	1/1:2,6:8:14.98:123,15,0	1/1:1,8:9:17.97:148,18,0	1/1:1,24:25:68.92:567,69,0	1/1:3,17:20:50.92:419,51,0	1/1:1,30:31:83.90:690,84,0	1/1:2,14:16:35.95:296,36,0	1/1:3,15:18:44.91:365,45,0	1/1:5,29:34:77.82:635,78,0	0/1:2,10:13:2.98:174,0,3	1/1:2,17:20:46.98:375,47,0	1/1:0,12:12:29.96:246,30,0	1/1:1,12:13:35.96:296,36,0	1/1:4,27:31:65.90:542,66,0	1/1:6,20:26:59.88:492,60,0	1/1:7,22:29:56.82:468,57,0	1/1:2,13:15:6.97:264,7,0
chr10	88132965	.	GTAAA	G	5657.21	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=1.780;DP=328;FS=11.362;HRun=0;HaplotypeScore=102.8097;InbreedingCoeff=0.5399;MQ=64.83;MQ0=0;MQRankSum=-3.851;QD=18.55;ReadPosRankSum=2.977;VQSLOD=3.4420;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:31.01:318,31,0	1/1:2,0:2:3:29,3,0	0/0:7,0:7:6.02:0,6,118	0/0:12,0:12:18.94:0,19,356	1/1:18,0:18:26.93:316,27,0	1/1:20,0:20:44.82:378,45,0	1/1:4,0:4:3:25,3,0	1/1:35,2:34:50.89:505,51,0	./.	1/1:11,0:11:20.87:168,21,0	1/1:15,0:15:35.90:311,36,0	1/1:8,0:8:12.01:110,12,0	1/1:3,1:4:8.99:130,9,0	1/1:4,0:3:5.99:49,6,0	1/1:6,1:7:12.04:168,12,0	1/1:7,0:7:12.04:170,12,0	1/1:32,0:31:50.96:455,51,0	1/1:19,0:19:29.92:248,30,0	1/1:13,2:14:32.78:412,33,0	1/1:13,0:13:18.05:236,18,0	1/1:2,0:2:3:28,3,0	1/1:3,0:3:6.01:59,6,0	1/1:2,0:2:3.01:41,3,0	1/1:3,0:3:6.02:84,6,0	1/1:11,0:11:21.04:254,21,0	1/1:16,0:16:38.95:374,39,0	1/1:17,0:16:30.08:374,30,0	1/1:13,2:15:44.87:415,45,0
chr10	88132982	.	TAAA	T	4426.79	PASS	AB=0.974;AC=41;AF=0.732;AN=56;BaseQRankSum=4.691;DP=326;FS=1.716;HRun=3;HaplotypeScore=102.0318;InbreedingCoeff=0.0437;MQ=62.94;MQ0=2;MQRankSum=-2.620;QD=14.37;ReadPosRankSum=8.162;VQSLOD=1.3147;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:12.43:146,12,0	1/1:2,0:1:2.92:17,3,0	0/0:4,0:3:6.02:0,6,141	0/0:14,0:12:30.03:0,30,500	1/1:1,15:16:31.97:420,32,0	1/1:20,0:20:18.11:167,18,0	0/1:5,0:5:2.74:3,0,22	0/1:32,0:29:31.02:243,0,31	1/1:6,0:6:16.29:77,16,0	0/1:13,0:13:39.94:49,0,40	1/1:14,0:14:7.34:116,7,0	0/1:6,0:6:1.10:42,0,1	0/1:3,2:5:3.24:128,0,3	0/1:7,0:6:21.35:21,0,22	1/1:1,3:4:12.04:180,12,0	1/1:3,4:7:20.24:259,20,0	0/1:32,0:31:11.78:199,0,12	0/1:15,0:15:1.61:113,0,2	1/1:6,11:16:40.68:526,41,0	1/1:6,8:14:3.13:347,3,0	0/1:2,0:2:5.35:11,0,5	0/1:4,0:4:12.37:23,0,12	1/1:4,1:5:14.15:121,14,0	1/1:0,3:3:6.02:104,6,0	1/1:7,5:12:27.78:253,28,0	0/1:19,0:19:17.02:140,0,17	1/1:7,9:16:40.14:506,40,0	1/1:16,0:16:35.36:216,35,0
chr10	88132985	.	ATT	A	8133.67	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=4.145;DP=324;FS=18.645;HRun=2;HaplotypeScore=82.4172;InbreedingCoeff=0.2075;MQ=63.32;MQ0=2;MQRankSum=-1.975;QD=27.20;ReadPosRankSum=7.886;VQSLOD=2.1386;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,11:17:44.79:528,45,0	1/1:1,3:3:6.02:87,6,0	0/0:4,0:3:6:0,6,78	0/0:15,0:13:29.86:0,30,412	0/1:16,0:16:20.01:148,0,20	1/1:3,18:21:54.07:767,54,0	1/1:4,1:5:11.99:124,12,0	1/1:7,26:30:75.67:1020,76,0	0/0:6,0:6:16.11:0,16,81	1/1:7,6:13:38.95:440,39,0	1/1:0,12:12:36.04:528,36,0	1/1:0,6:6:17.97:240,18,0	0/1:4,0:4:4.48:70,0,4	1/1:0,6:5:11.91:108,12,0	1/1:4,0:4:12.01:110,12,0	0/1:7,0:7:14.89:87,0,15	1/1:4,28:31:63.59:958,64,0	1/1:2,12:14:39.07:538,39,0	1/1:16,0:15:0.33:216,0,0	0/1:15,0:15:99:117,0,110	1/1:0,2:2:5.99:70,6,0	1/1:0,4:4:11.96:138,12,0	0/1:5,0:5:19.81:20,0,29	1/1:3,0:3:5.99:50,6,0	0/1:10,0:10:42.42:99,0,42	1/1:2,17:19:57:761,57,0	0/1:15,0:14:36.27:191,0,36	1/1:2,14:16:48.13:720,48,0
chr10	88132987	.	T	TA	3502.79	PASS	AB=0.971;AC=49;AF=0.875;AN=56;BaseQRankSum=-8.064;DP=332;FS=18.396;HRun=8;HaplotypeScore=93.7857;InbreedingCoeff=0.3807;MQ=64.49;MQ0=2;MQRankSum=0.849;QD=11.16;ReadPosRankSum=-6.190;VQSLOD=-0.4188;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:19:25.19:155,25,0	1/1:3,0:3:2.94:18,3,0	0/0:4,0:3:2.99:0,3,27	0/0:14,0:12:18:0,18,162	1/1:15,1:16:38.88:360,39,0	0/1:19,0:21:3.83:55,0,4	1/1:1,0:5:7.42:41,7,0	1/1:29,1:30:33.74:220,34,0	1/1:0,7:7:18.05:202,18,0	1/1:6,0:13:22.62:124,23,0	0/1:12,0:12:1.29:18,0,1	1/1:7,0:7:6.08:50,6,0	1/1:4,1:5:8.99:83,9,0	1/1:6,0:5:7.52:42,8,0	1/1:4,0:4:8.95:71,9,0	1/1:5,3:8:21.03:211,21,0	1/1:29,0:32:5.48:76,5,0	1/1:12,0:14:3.33:45,3,0	1/1:14,3:16:43.96:398,44,0	1/1:9,7:16:17.44:371,17,0	1/1:2,0:2:2.44:14,2,0	1/1:4,0:4:5.68:29,6,0	1/1:1,4:5:15.04:164,15,0	1/1:3,0:3:6:52,6,0	1/1:5,4:9:23.96:238,24,0	1/1:17,1:19:11.38:82,11,0	1/1:9,7:15:41.89:382,42,0	0/1:16,0:16:0.55:1,0,12
chr10	88133311	.	AATGT	A	5865.60	PASS	AB=0.944;AC=40;AF=0.714;AN=56;BaseQRankSum=-6.416;DP=497;FS=8.792;HRun=0;HaplotypeScore=98.0200;InbreedingCoeff=-0.1035;MQ=67.79;MQ0=8;MQRankSum=-1.922;QD=13.33;ReadPosRankSum=3.974;VQSLOD=3.2809;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,1:32:50.09:499,50,0	1/1:0,6:6:6.02:125,6,0	0/0:30,0:16:13.75:0,14,258	0/0:27,0:14:26.59:0,27,269	0/1:12,0:12:95.83:96,0,159	0/1:21,1:25:29.84:343,0,30	1/1:1,0:20:1.25:3,1,0	1/1:24,0:24:21.71:549,22,0	0/1:13,0:13:82.82:83,0,250	1/1:12,3:15:41.88:482,42,0	1/1:0,11:11:11.74:162,12,0	1/1:11,1:14:14.84:226,15,0	0/1:14,0:15:87.99:200,0,88	1/1:8,1:11:3.32:146,3,0	0/1:21,0:22:99:222,0,260	0/1:17,0:19:99:184,0,226	1/1:0,26:27:30.10:601,30,0	1/1:12,0:15:40.19:354,40,0	1/1:14,0:14:41.90:346,42,0	1/1:1,1:14:8.24:111,8,0	0/1:24,0:24:73.53:311,0,74	1/1:0,0:11:4.36:11,4,0	0/1:11,0:12:76.81:77,0,113	0/1:22,0:26:99:177,0,344	0/1:13,0:13:90.84:91,0,244	0/1:10,0:11:49.56:170,0,50	1/1:0,24:25:12.51:219,13,0	0/1:7,0:8:47.08:78,0,47
chr10	88133497	.	G	GC	9268.69	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-11.165;DP=608;FS=2.740;HRun=1;HaplotypeScore=57.4167;InbreedingCoeff=0.9999;MQ=92.61;MQ0=0;MQRankSum=-2.875;QD=39.61;ReadPosRankSum=2.493;VQSLOD=5.5564;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,1685	0/0:12,0:12:36.12:0,36,467	0/0:24,0:24:60.12:0,60,711	0/0:28,0:28:70.65:0,71,871	1/1:0,26:26:72.18:1046,72,0	0/0:23,0:23:69.21:0,69,877	0/0:20,0:20:60.19:0,60,766	0/0:31,0:31:93.27:0,93,1160	1/1:0,16:16:48.16:718,48,0	0/0:24,0:24:72.15:0,72,910	0/0:18,0:18:51.17:0,51,661	0/0:25,0:25:75.24:0,75,973	1/1:1,16:17:48.16:718,48,0	0/0:14,0:14:42.12:0,42,528	1/1:3,21:25:57.19:847,57,0	1/1:2,28:30:84.28:1258,84,0	0/0:17,0:17:42.12:0,42,530	0/0:19,0:19:51.15:0,51,646	1/1:2,19:21:54.14:760,54,0	1/1:0,16:16:45.07:645,45,0	0/0:21,0:21:60.16:0,60,748	0/0:15,0:15:45.15:0,45,584	1/1:0,17:17:45.15:674,45,0	1/1:0,21:21:60.20:899,60,0	1/1:0,15:15:39.13:583,39,0	0/0:20,0:20:60.19:0,60,765	1/1:1,29:30:75.25:1122,75,0	0/0:16,0:16:45.15:0,45,584
chr10	88133889	.	CTT	C	9255.99	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-0.485;DP=363;FS=0.602;HRun=3;HaplotypeScore=47.7577;InbreedingCoeff=0.8517;MQ=77.99;MQ0=15;MQRankSum=-5.113;QD=35.06;ReadPosRankSum=4.429;VQSLOD=4.5062;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.09:0,42,738	1/1:0,8:8:24.08:367,24,0	0/0:45,0:18:53.14:0,53,791	0/0:39,0:16:35.50:0,35,506	1/1:0,15:15:39.06:566,39,0	1/1:2,10:11:30.10:458,30,0	1/1:1,4:5:12.04:182,12,0	1/1:2,18:20:48.16:734,48,0	1/1:2,6:7:18.06:275,18,0	1/1:3,9:12:27.03:346,27,0	1/1:3,10:12:27.09:413,27,0	1/1:0,8:8:24.08:367,24,0	1/1:1,6:7:18.06:275,18,0	1/1:2,3:5:6.02:91,6,0	1/1:3,14:17:30.10:458,30,0	1/1:1,6:7:15.05:229,15,0	1/1:3,6:8:15.05:229,15,0	1/1:0,9:9:15.02:204,15,0	1/1:2,19:20:37.04:744,37,0	1/1:0,11:11:33.11:504,33,0	1/1:0,7:7:6.02:92,6,0	1/1:0,2:2:6.02:90,6,0	1/1:2,9:11:24.08:360,24,0	1/1:0,7:7:15.05:227,15,0	1/1:0,5:5:12.04:184,12,0	1/1:1,18:19:54.18:826,54,0	1/1:5,13:18:51.13:713,51,0	1/1:1,7:7:21.07:321,21,0
chr10	88133991	.	TG	T	6183.96	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.128;DP=504;FS=12.219;HRun=3;HaplotypeScore=84.7565;InbreedingCoeff=0.9931;MQ=87.46;MQ0=0;MQRankSum=-0.695;QD=32.55;ReadPosRankSum=2.194;VQSLOD=4.3577;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:99:0,102,1392	0/0:4,0:4:12.03:0,12,156	0/0:18,0:18:54.17:0,54,726	0/0:19,0:19:48.08:0,48,616	1/1:0,26:26:75.24:929,75,0	0/0:19,0:19:54.18:0,54,776	0/0:21,0:21:63.21:0,63,905	0/0:27,0:27:75.21:0,75,1051	1/1:0,14:13:30.09:371,30,0	0/0:22,0:22:63.15:0,63,832	0/0:13,0:13:36.12:0,36,518	0/0:11,0:11:33.10:0,33,453	1/1:1,15:16:42.13:520,42,0	0/0:13,0:13:39.12:0,39,542	1/1:0,13:13:36.11:446,36,0	1/1:0,17:17:48.15:595,48,0	0/0:32,0:32:84.21:0,84,1161	0/0:18,0:18:48.15:0,48,672	1/1:1,16:17:42.13:518,42,0	1/1:1,13:14:36.08:430,36,0	0/0:22,0:22:63.20:0,63,882	0/0:11,0:11:33.11:0,33,475	1/1:0,5:5:15.05:186,15,0	1/1:2,28:30:75.23:929,75,0	1/1:0,16:16:45.14:557,45,0	0/0:17,0:17:51.16:0,51,718	1/1:0,22:22:57.18:704,57,0	0/0:11,0:11:33.07:0,33,452
chr10	88134668	.	CTTTTTTTTTTTT	C	20320.85	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=0.104;DP=424;FS=10.127;HRun=17;HaplotypeScore=195.1937;InbreedingCoeff=0.8937;MQ=52.38;MQ0=10;MQRankSum=-2.873;QD=55.52;ReadPosRankSum=4.002;VQSLOD=1.7057;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,15:27:63.12:1522,63,0	1/1:3,3:6:15.02:327,15,0	0/0:27,0:8:21.07:0,21,441	0/0:28,0:11:21.54:0,22,538	1/1:5,21:26:57.09:1292,57,0	1/1:10,11:21:21.93:1294,22,0	1/1:10,5:15:42.02:700,42,0	1/1:15,0:15:26.93:357,27,0	1/1:4,5:9:27.09:617,27,0	1/1:14,8:22:57.03:1152,57,0	1/1:5,11:16:42.09:1107,42,0	1/1:7,6:13:36.07:814,36,0	1/1:1,4:5:15.05:406,15,0	1/1:4,3:7:18.03:404,18,0	1/1:10,7:17:45.13:984,45,0	1/1:8,5:13:33.05:702,33,0	1/1:9,5:14:36.04:694,36,0	1/1:4,2:5:15.03:295,15,0	1/1:9,3:12:26.98:502,27,0	1/1:5,16:21:57.11:1446,57,0	0/0:2,0:2:0:0,0,0	1/1:7,6:13:37.67:822,38,0	1/1:5,5:10:27.06:558,27,0	1/1:5,3:8:17.87:288,18,0	1/1:10,11:21:54.09:1310,54,0	1/1:14,7:21:41.95:935,42,0	1/1:8,13:20:54.11:1374,54,0	1/1:4,3:7:21.06:419,21,0
chr10	88134673	.	T	TGG	8519.12	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=0.697;DP=392;FS=23.302;HRun=0;HaplotypeScore=155.9573;InbreedingCoeff=0.8870;MQ=54.93;MQ0=13;MQRankSum=-2.539;QD=26.13;ReadPosRankSum=2.890;VQSLOD=4.1350;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:20,4:24:58.30:504,58,0	1/1:4,1:5:14.24:105,14,0	0/0:31,0:9:22.68:0,23,202	0/0:33,0:12:20.09:0,20,250	1/1:21,3:24:56.09:496,56,0	1/1:16,5:21:62.43:598,62,0	1/1:11,3:14:41.81:452,42,0	1/1:5,4:9:27.08:366,27,0	1/1:7,2:9:26.68:255,27,0	1/1:8,12:20:56.20:603,56,0	1/1:11,3:14:41.06:298,41,0	1/1:10,3:13:35.54:320,36,0	1/1:5,0:5:14.79:117,15,0	1/1:4,2:6:17.82:189,18,0	1/1:14,1:15:44.43:421,44,0	1/1:9,2:11:19.64:258,20,0	1/1:8,5:13:35.80:357,36,0	1/1:4,2:5:14.97:160,15,0	1/1:6,3:9:26.95:299,27,0	1/1:17,2:19:40.07:403,40,0	0/0:2,0:1:0:0,0,0	1/1:9,4:13:22.70:365,23,0	1/1:8,2:10:26.66:271,27,0	1/1:6,1:8:14.72:137,15,0	1/1:17,1:18:53.39:477,53,0	1/1:9,5:14:41.75:435,42,0	1/1:15,3:17:52.34:429,52,0	1/1:8,0:7:20.91:203,21,0
chr10	88134675	.	T	TC	172.17	PASS	AB=0.845;AC=18;AF=0.321;AN=56;BaseQRankSum=-9.441;DP=387;FS=6.054;HRun=0;HaplotypeScore=174.4238;InbreedingCoeff=-0.3792;MQ=55.80;MQ0=15;MQRankSum=1.071;QD=0.76;ReadPosRankSum=-5.819;VQSLOD=0.1588;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,1:23:33.20:0,33,299	0/1:3,1:4:3.25:3,0,59	0/1:33,0:9:4.27:4,0,64	0/0:36,0:13:14.13:0,14,169	0/0:21,3:24:11.61:0,12,252	0/1:17,4:21:7.70:8,0,234	0/0:11,2:13:4:0,4,106	0/1:7,1:8:9.30:21,0,9	0/1:7,2:9:28.69:29,0,85	0/1:15,3:18:35.73:36,0,145	0/0:12,2:14:32.58:0,33,255	0/1:9,2:11:24.60:25,0,126	0/0:5,0:5:4.19:0,4,78	0/1:3,2:5:9.22:9,0,55	0/1:14,1:15:0.50:0,0,168	0/1:9,2:11:0.86:1,0,110	0/1:9,3:12:4.51:5,0,112	0/1:4,2:5:13.79:14,0,27	0/1:8,3:9:36.27:54,0,36	0/0:16,2:18:13.05:0,13,288	0/0:2,0:1:0:0,0,0	0/1:9,4:13:29.46:29,0,105	0/1:8,2:10:13.96:14,0,72	0/1:7,1:8:3.21:3,0,45	0/0:17,0:17:9.06:0,9,218	0/1:13,1:14:44.61:45,0,109	0/1:16,2:17:12.25:12,0,262	0/0:8,0:7:17.68:0,18,102
chr10	88134690	.	C	CT	6395.21	PASS	AB=0.681;AC=50;AF=0.893;AN=56;BaseQRankSum=2.210;DP=363;FS=0.000;HRun=2;HaplotypeScore=140.2126;InbreedingCoeff=0.2468;MQ=49.40;MQ0=21;MQRankSum=-3.111;QD=19.32;ReadPosRankSum=3.209;VQSLOD=4.8644;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:54.09:533,54,0	1/1:0,5:5:11.98:109,12,0	0/1:28,0:4:9.40:9,0,22	0/0:31,0:8:8.84:0,9,51	1/1:4,16:20:35.99:317,36,0	1/1:1,15:16:37.76:399,38,0	1/1:0,11:11:27.05:273,27,0	0/1:1,6:7:2.33:155,0,2	1/1:0,8:8:21.02:201,21,0	1/1:1,8:9:24.02:241,24,0	1/1:1,15:16:39.01:356,39,0	1/1:0,11:11:30.03:286,30,0	1/1:0,7:7:18.03:183,18,0	1/1:0,6:6:18.03:177,18,0	1/1:1,11:11:20.49:230,20,0	0/1:2,7:9:7.71:95,0,8	1/1:1,11:11:23.97:225,24,0	1/1:1,11:11:5.13:181,5,0	1/1:4,4:6:18.03:183,18,0	1/1:3,19:22:9.43:390,9,0	0/1:2,3:4:0.67:47,0,1	1/1:1,10:11:7.79:234,8,0	1/1:2,12:14:4.81:206,5,0	1/1:0,8:9:13.78:156,14,0	1/1:0,14:14:36.04:337,36,0	1/1:0,12:12:36.09:389,36,0	1/1:1,18:19:28.24:398,28,0	1/1:2,3:3:9.01:87,9,0
chr10	88135848	.	GA	G	2338.87	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.024;DP=607;FS=13.707;HRun=1;HaplotypeScore=80.5114;InbreedingCoeff=0.9716;MQ=91.50;MQ0=0;MQRankSum=-3.233;QD=32.04;ReadPosRankSum=-1.600;VQSLOD=1.8154;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1726	0/0:6,0:6:18.06:0,18,262	0/0:21,0:21:56.06:0,56,782	0/0:33,0:31:93.05:0,93,1200	0/0:18,0:18:54.15:0,54,741	0/0:21,0:21:63.13:0,63,840	0/0:15,0:15:45.14:0,45,639	1/1:0,34:34:93.27:1234,93,0	0/0:18,0:18:54.15:0,54,749	0/0:29,0:29:84.27:0,84,1214	0/0:16,0:16:48.15:0,48,678	0/0:19,0:19:57.13:0,57,757	0/0:26,0:26:78.19:0,78,1067	0/0:20,0:20:60.20:0,60,876	0/0:27,0:27:81.23:0,81,1120	0/0:25,0:25:72.19:0,72,980	0/0:22,0:22:63.19:0,63,896	0/0:23,0:23:66.16:0,66,902	0/0:19,0:19:54.60:0,55,715	0/0:25,0:25:72.21:0,72,1016	1/1:0,16:16:30.10:419,30,0	0/0:21,0:21:63.16:0,63,842	0/0:20,0:20:60.12:0,60,832	0/0:33,0:33:99:0,99,1425	0/0:19,0:19:57.19:0,57,832	1/1:1,16:17:7.21:589,7,0	0/0:17,0:16:51.14:0,51,698	1/1:0,6:6:18.06:251,18,0
chr10	88136465	.	T	TTA	6753.77	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=1.127;DP=285;FS=7.213;HRun=0;HaplotypeScore=78.7695;InbreedingCoeff=0.6203;MQ=41.42;MQ0=12;MQRankSum=-2.439;QD=27.34;ReadPosRankSum=2.264;VQSLOD=5.8099;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,2:10:29.97:337,30,0	1/1:3,2:5:11.83:154,12,0	0/0:23,0:3:5.75:0,6,58	0/0:15,0:5:8.61:0,9,88	1/1:14,0:11:23.64:227,24,0	1/1:4,7:11:33.11:513,33,0	./.	1/1:27,0:26:75.01:859,75,0	1/1:6,0:6:17.63:163,18,0	1/1:10,3:13:39.05:521,39,0	1/1:7,0:6:15.05:184,15,0	1/1:4,1:5:15.05:220,15,0	1/1:7,0:6:14.48:79,14,0	1/1:2,1:2:6.02:88,6,0	1/1:8,0:6:17.76:161,18,0	1/1:4,0:4:12.02:146,12,0	1/1:9,3:12:29.93:402,30,0	1/1:7,2:7:18.06:269,18,0	1/1:19,0:16:47.66:466,48,0	1/1:10,0:9:27.02:296,27,0	1/1:2,0:2:5.91:53,6,0	1/1:2,0:2:6.01:63,6,0	1/1:8,0:7:6.02:87,6,0	1/1:1,0:1:3.01:36,3,0	1/1:15,0:13:26.76:266,27,0	1/1:18,0:16:22.65:355,23,0	1/1:15,0:14:38.51:349,39,0	1/1:14,0:14:36.05:461,36,0
chr10	88136472	.	T	TA	298.85	PASS	AB=0.951;AC=22;AF=0.423;AN=52;BaseQRankSum=-2.237;DP=262;FS=5.910;HRun=0;HaplotypeScore=90.8817;InbreedingCoeff=0.1593;MQ=39.73;MQ0=12;MQRankSum=-0.381;QD=1.92;ReadPosRankSum=-4.278;VQSLOD=0.4862;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,1:11:5.35:0,5,27	0/1:4,2:6:4.58:29,0,5	0/0:23,0:3:6.01:0,6,56	0/0:15,0:5:4.63:0,5,39	0/1:13,0:10:13.02:13,0,44	1/1:5,7:12:21.80:132,22,0	./.	0/1:21,0:18:25.85:34,0,26	0/0:7,0:7:5.14:0,5,58	1/1:4,3:7:1.55:54,2,0	0/1:6,0:5:0.01:0,0,1	1/1:3,1:4:2.59:17,3,0	0/0:8,0:7:14.47:0,14,81	1/1:1,1:1:2.94:18,3,0	0/0:7,0:5:9.22:0,9,51	1/1:4,0:4:6.37:42,6,0	0/1:10,2:12:15.64:16,0,30	1/1:6,2:6:8.54:46,9,0	0/1:22,0:16:17.80:18,0,69	0/0:7,0:6:1.39:0,1,12	0/0:2,0:2:2.44:0,2,15	./.	0/0:7,0:6:0:0,0,0	0/0:1,0:1:1.55:0,2,4	0/1:11,0:9:4.05:4,0,37	0/1:15,0:14:3.02:3,0,84	0/0:17,0:15:14.75:0,15,99	1/1:13,0:13:0.42:17,0,0
chr10	88136475	.	T	TATTTA	2180.41	PASS	AB=0.983;AC=35;AF=0.673;AN=52;BaseQRankSum=-3.339;DP=271;FS=6.069;HRun=0;HaplotypeScore=102.0903;InbreedingCoeff=0.2727;MQ=34.71;MQ0=14;MQRankSum=-0.263;QD=10.14;ReadPosRankSum=-3.593;VQSLOD=0.2921;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:15.53:109,16,0	1/1:4,2:6:10.45:131,10,0	0/0:21,0:1:2.96:0,3,19	0/0:14,0:4:5.88:0,6,54	0/1:13,0:10:2.26:76,0,2	1/1:6,6:13:28.46:434,28,0	./.	1/1:22,0:19:28.95:213,29,0	0/0:6,0:6:8.48:0,8,27	1/1:5,3:8:20.54:240,21,0	1/1:6,0:5:6.39:34,6,0	1/1:3,0:4:11.55:100,12,0	0/0:8,0:7:10.70:0,11,34	1/1:1,1:1:3.01:57,3,0	0/1:7,0:5:5.13:5,0,10	1/1:6,0:6:8.24:118,8,0	0/1:13,2:14:10.04:204,0,10	1/1:7,2:6:11.62:147,12,0	1/1:22,0:16:10.69:119,11,0	1/1:8,0:7:10.79:73,11,0	0/1:2,0:2:1.43:8,0,1	./.	0/0:7,0:6:1.25:0,1,3	1/1:1,0:1:2.68:11,3,0	0/1:12,0:10:7.07:49,0,7	0/1:16,0:15:45.87:75,0,46	0/1:17,0:15:10.76:59,0,11	1/1:11,0:11:9.62:69,10,0
chr10	88136715	.	CTG	C	876.59	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.263;DP=440;FS=4.686;HRun=0;HaplotypeScore=52.4969;InbreedingCoeff=0.9870;MQ=90.17;MQ0=0;MQRankSum=-4.028;QD=36.52;ReadPosRankSum=0.280;VQSLOD=5.3007;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:66.22:971,66,0	0/0:8,0:8:24.08:0,24,449	0/0:14,0:14:36.12:0,36,674	0/0:20,0:20:53.95:0,54,956	0/0:12,0:12:33.11:0,33,618	0/0:16,0:16:42.11:0,42,722	0/0:19,0:19:54.19:0,54,1003	0/0:28,0:28:81.28:0,81,1510	0/0:16,0:16:48.16:0,48,899	0/0:10,0:10:30.10:0,30,560	0/0:7,0:7:18.04:0,18,305	0/0:15,0:15:45.15:0,45,836	0/0:17,0:17:51.17:0,51,955	0/0:21,0:21:63.22:0,63,1177	0/0:17,0:17:45.15:0,45,827	0/0:15,0:15:45.15:0,45,842	0/0:25,0:25:75.21:0,75,1328	0/0:11,0:11:33.11:0,33,602	0/0:15,0:14:33.11:0,33,611	0/0:17,0:17:48.16:0,48,889	0/0:11,0:11:33.11:0,33,617	0/0:10,0:10:27.09:0,27,500	0/0:12,0:12:33.11:0,33,618	0/0:16,0:16:48.16:0,48,898	0/0:17,0:17:51.17:0,51,952	0/0:18,0:18:48.16:0,48,899	0/0:15,0:13:42.14:0,42,786	0/0:14,0:14:42.14:0,42,785
chr10	88137803	.	CT	C	11445.69	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.283;DP=481;FS=21.288;HRun=7;HaplotypeScore=58.7174;InbreedingCoeff=0.9621;MQ=74.42;MQ0=1;MQRankSum=-5.369;QD=25.55;ReadPosRankSum=4.639;VQSLOD=3.2520;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:83.56:834,84,0	1/1:1,7:8:18.04:184,18,0	0/0:14,0:11:11.93:0,12,248	0/0:19,0:16:21.73:0,22,270	1/1:1,18:19:48.06:479,48,0	1/1:0,18:18:54.12:551,54,0	1/1:0,13:13:27.06:275,27,0	1/1:5,16:21:17.66:401,18,0	1/1:1,13:14:36.08:367,36,0	1/1:1,21:22:63.12:630,63,0	1/1:1,8:9:18.04:184,18,0	1/1:1,11:12:33.08:337,33,0	1/1:0,8:8:18.04:184,18,0	1/1:0,9:9:27.06:275,27,0	1/1:3,9:12:24.05:245,24,0	1/1:0,13:13:33.08:337,33,0	1/1:1,24:25:66.15:673,66,0	1/1:3,17:20:51.11:520,51,0	1/1:1,14:15:42.08:421,42,0	1/1:0,19:19:54.12:551,54,0	1/1:2,27:29:66.15:673,66,0	1/1:0,12:12:30.07:306,30,0	1/1:0,16:16:42.01:428,42,0	1/1:1,13:14:33.07:337,33,0	1/1:0,29:29:72.16:735,72,0	1/1:1,19:20:57.10:573,57,0	1/1:1,20:21:51.10:520,51,0	1/1:3,14:17:42.09:428,42,0
chr10	88138295	.	C	CTT	6090.81	PASS	AB=0.648;AC=48;AF=0.857;AN=56;BaseQRankSum=-0.201;DP=587;FS=9.385;HRun=11;HaplotypeScore=105.5914;InbreedingCoeff=0.0896;MQ=76.62;MQ0=1;MQRankSum=-2.066;QD=10.65;ReadPosRankSum=2.042;VQSLOD=2.5841;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:40:27.72:140,0,28	1/1:1,3:4:12.03:156,12,0	0/1:23,0:21:42.87:43,0,76	0/0:14,0:9:11.99:0,12,108	1/1:7,0:37:34.64:188,35,0	1/1:3,0:18:8.84:91,9,0	1/1:10,0:24:6.34:82,6,0	1/1:8,17:27:57.87:736,58,0	1/1:5,0:27:21.80:145,22,0	1/1:5,18:23:54.06:651,54,0	1/1:4,18:22:51.07:673,51,0	1/1:4,0:24:13.83:108,14,0	1/1:7,0:15:6.21:98,6,0	0/1:3,0:19:1.14:58,0,1	1/1:3,0:24:47.41:163,47,0	1/1:4,0:25:13.83:108,14,0	1/1:5,18:24:44.61:596,45,0	1/1:3,1:12:20.48:103,20,0	0/1:8,0:16:19.57:31,0,20	1/1:2,0:14:32.99:127,33,0	1/1:3,14:20:38.07:459,38,0	1/1:2,0:19:5.96:82,6,0	0/1:7,0:24:0.59:58,0,1	0/1:3,0:20:12.72:91,0,13	1/1:3,0:20:6.36:83,6,0	1/1:6,20:28:63.15:853,63,0	1/1:4,0:17:30.45:124,30,0	1/1:1,4:5:3.01:43,3,0
chr10	88138531	.	T	TA	1378.25	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-7.937;DP=514;FS=0.542;HRun=10;HaplotypeScore=53.3134;InbreedingCoeff=0.9736;MQ=71.72;MQ0=0;MQRankSum=-1.876;QD=19.97;ReadPosRankSum=-1.710;VQSLOD=3.7243;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:95.85:0,96,783	0/0:6,0:6:14.91:0,15,114	0/0:14,0:15:27.85:0,28,209	0/0:12,0:12:20.89:0,21,162	0/0:20,0:20:50.89:0,51,415	0/0:16,2:19:14.99:0,15,319	0/0:13,0:13:16.50:0,17,273	1/1:9,27:36:74.35:788,74,0	0/0:18,0:18:50.92:0,51,415	0/0:32,0:32:62.88:0,63,514	0/0:21,0:21:56.77:0,57,453	0/0:13,0:13:29.84:0,30,236	0/0:13,0:13:32.96:0,33,271	0/0:14,0:14:32.91:0,33,262	0/0:18,0:18:41.91:0,42,340	0/0:12,0:12:26.16:0,26,204	0/0:26,0:26:64.47:0,64,521	0/0:15,0:15:35.92:0,36,290	0/0:19,0:19:50.93:0,51,416	0/0:21,0:21:23.88:0,24,345	1/1:1,8:9:21.05:224,21,0	0/0:20,2:22:19.15:0,19,359	0/0:21,0:21:47.91:0,48,394	0/0:18,0:18:41.95:0,42,345	0/0:12,0:12:32.96:0,33,271	1/1:5,14:19:39.05:395,39,0	0/0:30,0:30:89.78:0,90,727	1/1:0,5:5:12.03:128,12,0
chr10	88138651	.	AT	A	786.24	PASS	AB=0.803;AC=9;AF=0.161;AN=56;BaseQRankSum=-0.294;DP=565;FS=11.071;HRun=13;HaplotypeScore=91.9960;InbreedingCoeff=0.6854;MQ=72.34;MQ0=0;MQRankSum=-0.074;QD=7.78;ReadPosRankSum=-1.274;VQSLOD=1.3869;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.09:0,84,800	0/0:11,0:11:10.49:0,10,217	0/0:31,0:19:13.54:0,14,109	0/1:18,0:10:0.80:14,0,1	0/0:27,0:29:30.50:0,31,444	0/0:22,0:23:28.47:0,28,190	0/0:24,0:24:28.75:0,29,173	1/1:9,18:27:53.51:387,54,0	0/0:16,0:16:41.88:0,42,382	0/1:17,4:22:6.66:7,0,381	0/0:17,2:19:7.27:0,7,394	0/0:13,0:13:36.69:0,37,182	0/0:12,0:13:23.72:0,24,257	0/0:10,1:11:3.62:0,4,92	0/0:19,0:19:53.89:0,54,487	0/0:20,0:22:62.58:0,63,538	0/0:31,1:32:59.20:0,59,725	0/0:31,0:30:65.02:0,65,293	0/0:13,0:13:18.54:0,19,218	0/0:35,0:36:77.35:0,77,639	0/1:2,5:9:2.27:99,0,2	0/0:11,0:11:23.07:0,23,113	0/0:22,0:23:44.45:0,44,347	0/0:15,0:15:41.94:0,42,386	0/0:25,0:25:53.98:0,54,551	1/1:3,13:16:16.31:258,16,0	0/0:15,0:16:30.92:0,31,340	1/1:1,8:9:23.86:175,24,0
chr10	88139877	.	GA	G	6187.51	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.853;DP=694;FS=5.395;HRun=4;HaplotypeScore=67.4976;InbreedingCoeff=0.9996;MQ=88.91;MQ0=0;MQRankSum=-2.534;QD=32.74;ReadPosRankSum=0.680;VQSLOD=5.4723;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.27:0,87,1200	1/1:1,10:11:24.07:288,24,0	0/0:22,0:22:56.51:0,57,714	0/0:29,0:29:60.14:0,60,808	0/0:24,0:24:72.24:0,72,1005	0/0:24,0:24:72.23:0,72,987	0/0:25,0:25:75.23:0,75,1016	1/1:0,28:28:84.22:975,84,0	0/0:23,0:23:69.22:0,69,938	1/1:0,25:25:75.23:900,75,0	1/1:0,19:19:51.11:596,51,0	0/0:15,0:15:42.14:0,42,575	0/0:33,0:33:99:0,99,1386	0/0:27,0:27:81.27:0,81,1132	0/0:20,0:20:60.20:0,60,840	0/0:17,0:17:51.17:0,51,714	1/1:2,38:40:99:1186,99,0	0/0:23,0:23:63.19:0,63,864	0/0:27,0:27:75.25:0,75,1050	0/0:26,0:26:75.24:0,75,1033	1/1:0,18:18:48.15:576,48,0	0/0:28,0:28:81.27:0,81,1133	0/0:16,0:16:42.14:0,42,583	0/0:40,0:40:99:0,117,1587	0/0:29,0:29:84.27:0,84,1161	1/1:0,26:26:78.21:911,78,0	0/0:27,0:27:81.25:0,81,1116	1/1:0,22:22:63.19:756,63,0
chr10	88140190	.	AGT	A	1423.63	PASS	AB=0.883;AC=34;AF=0.607;AN=56;BaseQRankSum=8.513;DP=538;FS=1.258;HRun=0;HaplotypeScore=87.0198;InbreedingCoeff=0.0916;MQ=61.96;MQ0=4;MQRankSum=1.004;QD=3.32;ReadPosRankSum=1.572;VQSLOD=1.8134;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:28:31.36:159,31,0	0/1:17,1:17:3.77:4,0,307	0/0:40,0:24:5.99:0,6,67	0/0:34,0:19:1.98:0,2,43	1/1:3,0:15:5.68:29,6,0	0/1:7,0:8:5.07:5,0,61	0/1:20,4:24:43.50:44,0,246	0/1:15,4:20:16.13:97,0,16	1/1:6,0:8:3.73:16,4,0	0/1:22,2:24:46.48:46,0,206	0/1:21,1:22:0.69:1,0,378	0/1:15,0:15:6.89:7,0,168	1/1:1,0:6:14.20:70,14,0	0/0:13,0:13:24.08:0,24,353	1/1:5,0:8:5.68:28,6,0	1/1:3,0:10:8.52:43,9,0	0/1:33,3:36:33.92:34,0,801	0/1:19,2:21:3.71:4,0,359	0/0:12,0:12:5.89:0,6,61	0/1:13,1:15:6.71:7,0,298	1/1:25,27:53:44.86:487,45,0	0/1:10,3:13:40.52:41,0,264	1/1:2,0:10:0.47:1,0,0	1/1:8,0:19:5.55:28,6,0	0/1:8,0:18:6.22:34,0,6	1/1:10,8:18:7.71:205,8,0	0/0:10,0:10:21.07:0,21,317	1/1:13,6:19:15.21:202,15,0
chr10	88140570	.	CT	C	3490.08	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=0.141;DP=576;FS=5.841;HRun=9;HaplotypeScore=70.0448;InbreedingCoeff=0.9492;MQ=66.29;MQ0=5;MQRankSum=1.289;QD=19.39;ReadPosRankSum=0.727;VQSLOD=4.0984;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:95.84:0,96,1049	1/1:0,12:12:33.02:301,33,0	0/0:37,0:19:13.04:0,13,248	0/1:19,0:11:0.24:0,0,156	0/0:14,0:14:36.09:0,36,396	0/0:20,0:20:51.13:0,51,571	0/0:27,0:26:63.12:0,63,688	1/1:6,17:23:54.62:475,55,0	0/0:24,0:24:60.16:0,60,682	1/1:1,24:25:72:650,72,0	1/1:5,19:24:51.02:466,51,0	0/0:25,0:25:60.12:0,60,656	0/0:12,0:12:36.10:0,36,403	0/0:19,0:19:54.07:0,54,600	0/0:27,0:27:75.08:0,75,834	0/0:18,0:17:42.12:0,42,484	1/1:1,28:29:66.04:604,66,0	0/0:21,0:19:54.02:0,54,598	0/0:19,0:18:39.10:0,39,439	0/0:13,0:11:30.09:0,30,346	1/1:2,8:10:18.01:165,18,0	0/0:9,0:9:24.07:0,24,269	0/0:12,0:11:29.94:0,30,314	0/0:29,1:31:40.32:0,40,856	0/0:16,0:16:42.12:0,42,485	1/1:2,24:26:71.07:637,71,0	0/0:19,0:19:54.16:0,54,622	1/1:0,11:11:21.01:192,21,0
chr10	88140580	.	G	GTT	1156.46	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.045;DP=578;FS=0.728;HRun=9;HaplotypeScore=88.0902;InbreedingCoeff=0.9486;MQ=63.28;MQ0=7;MQRankSum=0.385;QD=34.01;ReadPosRankSum=0.121;VQSLOD=3.6281;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:34:83.76:1251,84,0	0/0:14,0:14:36.08:0,36,389	0/0:34,0:13:16.09:0,16,159	0/0:21,0:10:14.61:0,15,176	0/0:15,0:15:33.06:0,33,358	0/0:20,0:20:42.08:0,42,456	0/0:26,0:25:60.12:0,60,649	0/0:25,0:25:50.37:0,50,533	0/0:24,0:24:57.11:0,57,625	0/0:29,0:28:69.16:0,69,754	0/0:20,0:20:48.11:0,48,524	0/0:21,0:22:44.81:0,45,480	0/0:13,0:13:27.03:0,27,283	0/0:19,0:19:42.06:0,42,450	0/0:27,0:27:60.05:0,60,649	0/0:15,0:16:45.11:0,45,491	0/0:29,0:29:69.17:0,69,746	0/0:22,0:20:45.10:0,45,501	0/0:16,0:15:33.07:0,33,359	0/0:15,0:12:36.07:0,36,383	0/0:10,0:10:23.95:0,24,237	0/0:10,0:10:18.04:0,18,199	0/0:12,0:10:18.04:0,18,201	0/0:28,0:28:72.17:0,72,795	0/0:17,0:17:51.14:0,51,565	0/0:28,0:27:60.13:0,60,647	0/0:19,0:19:36.03:0,36,390	0/0:11,0:11:21.06:0,21,231
chr10	88140881	.	TA	T	3793.06	PASS	AB=0.820;AC=32;AF=0.571;AN=56;BaseQRankSum=-1.221;DP=532;FS=2.759;HRun=13;HaplotypeScore=70.0997;InbreedingCoeff=0.6930;MQ=75.59;MQ0=4;MQRankSum=0.390;QD=10.78;ReadPosRankSum=-0.082;VQSLOD=3.2805;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:32:50.92:147,51,0	1/1:1,5:6:17.76:123,18,0	0/1:21,1:19:15.72:16,0,69	0/0:18,0:12:15.25:0,15,115	0/0:15,0:18:44.70:0,45,393	0/1:4,13:19:12.54:229,0,13	1/1:3,15:18:35.78:263,36,0	1/1:5,17:23:18.91:261,19,0	0/0:16,0:17:21.31:0,21,279	1/1:5,18:24:29.52:368,30,0	1/1:3,20:23:53.45:378,53,0	1/1:1,10:14:35.94:237,36,0	0/0:14,1:15:17.06:0,17,303	1/1:2,13:15:23.83:175,24,0	0/0:18,1:19:29.12:0,29,430	0/1:21,3:24:11.47:11,0,328	1/1:4,17:21:44.23:316,44,0	1/1:2,8:11:25.86:178,26,0	0/0:21,0:21:38.28:0,38,398	0/0:19,1:22:3.18:0,3,294	1/1:4,15:19:35.79:263,36,0	1/1:1,11:12:20.76:149,21,0	0/0:17,0:17:22.85:0,23,209	0/0:13,0:13:29.84:0,30,255	0/0:17,3:20:23.12:0,23,377	1/1:2,26:29:79.44:562,79,0	0/1:23,4:27:8.59:9,0,399	1/1:3,7:10:14.89:109,15,0
chr10	88141318	.	G	GACAGACAGAC	10939.59	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-3.311;DP=726;FS=2.282;HRun=0;HaplotypeScore=233.9403;InbreedingCoeff=0.9127;MQ=55.98;MQ0=7;MQRankSum=-12.101;QD=56.10;ReadPosRankSum=-2.914;VQSLOD=3.7059;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:50:99:0,141,3483	1/1:1,1:7:3.01:102,3,0	0/0:21,0:12:24.08:0,24,519	0/0:31,0:14:26.90:0,27,374	0/0:27,0:27:68.88:0,69,1635	0/0:15,0:17:51.16:0,51,1485	0/0:29,0:30:81:0,81,2118	1/1:34,0:31:33.72:1802,34,0	0/0:37,0:37:99:0,99,2635	1/1:4,23:31:87.80:3315,88,0	1/1:3,19:25:12.04:631,12,0	0/0:22,0:24:65.94:0,66,1567	0/0:26,0:26:75.13:0,75,1944	0/0:19,0:20:57.20:0,57,1636	0/0:27,0:27:75.24:0,75,2166	0/0:27,0:27:68.88:0,69,1677	1/1:9,20:30:27.09:1310,27,0	0/0:26,0:27:52.79:0,53,2110	0/0:21,0:21:38.11:0,38,1152	0/0:29,0:29:78.11:0,78,2022	1/1:30,0:28:0.72:309,1,0	0/0:22,0:23:63.16:0,63,1712	0/0:21,0:21:13.12:0,13,1459	0/0:22,0:22:60.19:0,60,1746	0/0:13,0:13:38.99:0,39,994	1/1:32,0:32:87.18:2936,87,0	0/0:36,0:36:99:0,105,2270	1/1:5,0:5:12.04:533,12,0
chr10	88141320	.	C	CAGACAGACAG	10392.69	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-3.804;DP=720;FS=0.378;HRun=0;HaplotypeScore=228.1606;InbreedingCoeff=0.9591;MQ=55.70;MQ0=7;MQRankSum=-9.803;QD=53.57;ReadPosRankSum=-2.624;VQSLOD=4.1435;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:99:0,144,3935	1/1:6,0:6:3.01:86,3,0	0/0:22,0:12:32.09:0,32,629	0/0:33,0:14:27.09:0,27,490	0/0:23,0:23:69.23:0,69,1875	0/0:17,0:17:51.17:0,51,1552	0/0:29,0:29:71.35:0,71,2293	1/1:32,0:31:64.34:953,64,0	0/0:36,0:36:99:0,102,2909	1/1:28,0:28:74.17:2728,74,0	1/1:23,0:23:11.95:564,12,0	0/0:24,0:24:53.32:0,53,1673	0/0:26,0:26:75.26:0,75,2262	0/0:19,0:19:57.20:0,57,1774	0/0:28,0:28:81.25:0,81,2422	0/0:25,0:25:69.22:0,69,1908	1/1:29,0:28:27.08:1145,27,0	0/0:27,0:27:78.27:0,78,2303	0/0:22,0:22:56.72:0,57,1381	0/0:30,0:30:84.24:0,84,2310	1/1:23,4:27:25.36:425,25,0	0/0:23,0:23:66.15:0,66,1808	0/0:23,0:23:42.97:0,43,1708	0/0:21,0:21:60.21:0,60,1927	0/0:13,0:13:39.13:0,39,1142	1/1:2,32:38:99:3884,105,0	0/0:35,0:35:99:0,105,2622	1/1:0,4:7:12.04:607,12,0
chr10	88142131	.	G	GC	2598.51	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-8.651;DP=445;FS=9.740;HRun=8;HaplotypeScore=40.8546;InbreedingCoeff=0.9868;MQ=81.00;MQ0=0;MQRankSum=-0.883;QD=24.06;ReadPosRankSum=1.865;VQSLOD=3.8267;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.03:0,66,604	0/0:9,0:9:24.01:0,24,219	0/0:19,0:19:36.01:0,36,383	0/0:7,0:7:14.94:0,15,125	0/0:18,0:18:51.03:0,51,466	1/1:2,18:21:53.99:603,54,0	1/1:3,16:19:45.13:519,45,0	0/0:24,0:24:60.01:0,60,545	0/0:18,2:20:19.40:0,19,426	0/0:17,0:17:42.01:0,42,384	0/0:23,0:23:59.92:0,60,529	1/1:4,17:21:42.12:481,42,0	0/0:13,0:13:33:0,33,297	1/1:5,16:21:14.66:423,15,0	0/0:17,0:17:48.01:0,48,435	0/0:13,0:14:35.05:0,35,308	0/0:17,0:17:45:0,45,407	1/1:2,18:20:51.15:585,51,0	0/0:11,0:11:30.01:0,30,275	0/0:12,0:12:27:0,27,247	0/0:10,0:10:27:0,27,242	1/1:0,6:6:15.04:173,15,0	0/0:12,0:12:33.02:0,33,302	0/0:11,0:11:24:0,24,219	0/0:14,0:14:39.01:0,39,357	0/0:23,0:23:62.30:0,62,572	0/0:14,0:14:36.01:0,36,329	0/0:9,0:9:24.01:0,24,219
chr10	88142241	.	CT	C	7897.46	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=5.935;DP=479;FS=4.161;HRun=10;HaplotypeScore=53.8767;InbreedingCoeff=0.9817;MQ=70.59;MQ0=0;MQRankSum=-0.472;QD=20.89;ReadPosRankSum=1.274;VQSLOD=5.8597;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,17:25:41.96:365,42,0	1/1:0,6:6:18:156,18,0	0/0:16,0:15:29.54:0,30,295	0/0:5,0:5:8.60:0,9,70	1/1:4,27:31:80.98:702,81,0	0/0:14,0:14:33.07:0,33,349	0/0:18,0:18:48.13:0,48,531	1/1:6,24:30:35.75:533,36,0	1/1:1,14:15:38.99:339,39,0	1/1:1,22:23:65.98:573,66,0	1/1:1,20:21:56.98:495,57,0	0/0:12,0:12:33.02:0,33,349	1/1:0,11:11:32.99:287,33,0	0/0:12,0:12:27.07:0,27,299	1/1:2,17:19:44.99:391,45,0	1/1:1,15:16:35.99:313,36,0	1/1:3,24:26:65.99:573,66,0	0/0:18,0:18:48.13:0,48,531	1/1:3,20:22:59.96:516,60,0	1/1:4,13:17:35.99:313,36,0	1/1:0,6:6:15:130,15,0	0/0:0,0:6:17.04:0,17,85	1/1:2,14:16:32.77:286,33,0	1/1:2,6:8:17.98:156,18,0	1/1:3,13:16:35.98:313,36,0	1/1:4,14:18:41.97:360,42,0	1/1:5,19:24:55.80:474,56,0	1/1:1,25:26:71.98:625,72,0
chr10	88142346	.	C	CA	3783.01	PASS	AB=0.636;AC=15;AF=0.268;AN=56;BaseQRankSum=13.878;DP=464;FS=4.052;HRun=0;HaplotypeScore=63.2648;InbreedingCoeff=0.9083;MQ=87.20;MQ0=0;MQRankSum=-4.517;QD=29.33;ReadPosRankSum=-0.120;VQSLOD=3.5555;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.20:0,60,839	0/1:3,4:7:36.72:120,0,37	0/0:13,0:13:39.13:0,39,545	0/0:24,0:24:59.60:0,60,705	0/0:24,0:24:60.20:0,60,838	0/0:15,0:15:45.15:0,45,628	0/0:17,0:17:51.15:0,51,680	1/1:2,13:16:42.94:425,43,0	0/0:9,0:9:27.09:0,27,378	1/1:2,27:29:66.31:872,66,0	1/1:4,14:18:37.73:508,38,0	0/0:16,0:16:48.12:0,48,649	0/0:15,0:15:45.15:0,45,629	0/0:11,0:11:33.10:0,33,444	0/0:14,0:14:33.11:0,33,461	0/0:11,0:11:33.11:0,33,461	1/1:3,14:17:34:479,34,0	0/0:14,0:14:42.14:0,42,588	0/0:21,0:21:63.17:0,63,816	0/0:18,0:18:48.15:0,48,655	1/1:2,7:9:27.06:295,27,0	0/0:12,0:12:36.12:0,36,503	0/0:14,0:14:39.13:0,39,545	0/0:18,0:18:51.16:0,51,696	0/0:19,0:19:48.15:0,48,655	1/1:5,17:22:66.17:751,66,0	0/0:27,0:27:60.20:0,60,839	1/1:1,10:11:33.05:333,33,0
chr10	88142347	.	C	CA	3739.69	PASS	AB=0.583;AC=15;AF=0.268;AN=56;BaseQRankSum=14.927;DP=463;FS=2.854;HRun=0;HaplotypeScore=64.2300;InbreedingCoeff=0.9089;MQ=87.93;MQ0=0;MQRankSum=-5.321;QD=28.33;ReadPosRankSum=-0.032;VQSLOD=3.5561;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.20:0,60,838	0/1:2,4:7:20.97:155,0,21	0/0:14,0:14:39.13:0,39,544	0/0:24,0:24:41.16:0,41,629	0/0:24,0:24:63.17:0,63,857	0/0:15,0:15:45.15:0,45,628	0/0:16,0:16:48.15:0,48,654	1/1:6,13:19:47.82:469,48,0	0/0:10,0:10:27.09:0,27,377	1/1:2,27:29:84.17:913,84,0	1/1:3,14:17:48.03:478,48,0	0/0:16,0:16:45.15:0,45,629	0/0:16,0:16:45.15:0,45,628	0/0:10,0:10:30.10:0,30,419	0/0:14,0:14:33.10:0,33,444	0/0:11,0:11:33.11:0,33,461	1/1:4,14:18:51.03:497,51,0	0/0:14,0:14:42.14:0,42,587	0/0:19,0:19:57.18:0,57,780	0/0:17,0:17:48.15:0,48,653	1/1:2,7:9:24.03:251,24,0	0/0:12,0:12:36.12:0,36,503	0/0:14,0:14:39.12:0,39,528	0/0:17,0:17:48.15:0,48,654	0/0:18,0:18:45.15:0,45,629	1/1:4,17:21:57.15:650,57,0	0/0:27,0:27:60.20:0,60,838	1/1:2,10:12:33.01:327,33,0
chr10	88142435	.	C	CAT	5757.04	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-0.255;DP=400;FS=3.454;HRun=0;HaplotypeScore=71.1245;InbreedingCoeff=0.8270;MQ=69.93;MQ0=4;MQRankSum=-1.852;QD=17.93;ReadPosRankSum=-1.401;VQSLOD=4.5045;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:12:6.49:100,6,0	1/1:5,1:10:23.46:237,23,0	0/0:17,0:9:20.95:0,21,232	0/0:6,0:5:11.30:0,11,85	1/1:6,16:25:44.64:529,45,0	0/0:13,0:13:29.95:0,30,359	0/0:11,0:13:29.30:0,29,389	1/1:2,1:26:71.67:666,72,0	1/1:2,9:13:3.01:55,3,0	1/1:6,0:24:62.62:626,63,0	1/1:17,0:25:55.44:518,55,0	0/1:11,0:11:7.57:8,0,133	1/1:7,0:7:11.91:88,12,0	0/0:6,0:7:14.89:0,15,188	1/1:2,13:15:10.85:166,11,0	1/1:0,11:14:9.03:168,9,0	1/1:11,0:12:17.45:157,17,0	0/0:11,0:14:29.83:0,30,361	1/1:4,16:24:56.32:631,56,0	1/1:2,6:12:24.22:232,24,0	1/1:4,0:8:22.51:191,23,0	0/0:8,0:9:17.82:0,18,176	1/1:5,4:10:25.21:344,25,0	1/1:0,7:7:12.04:227,12,0	1/1:0,10:12:9.02:144,9,0	1/1:10,0:15:26.85:269,27,0	1/1:6,3:25:20.87:280,21,0	1/1:8,0:10:16.69:122,17,0
chr10	88142453	.	G	GA	2699.74	PASS	AB=0.962;AC=17;AF=0.304;AN=56;BaseQRankSum=-1.148;DP=338;FS=13.953;HRun=3;HaplotypeScore=54.4447;InbreedingCoeff=0.8279;MQ=80.59;MQ0=4;MQRankSum=-2.610;QD=20.00;ReadPosRankSum=2.530;VQSLOD=2.1544;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:3.01:0,3,33	1/1:3,6:9:15.05:206,15,0	0/1:23,1:14:2.38:2,0,252	0/0:9,0:8:2.76:0,3,24	0/0:24,0:24:54.11:0,54,584	0/0:11,0:11:24.06:0,24,276	0/0:15,0:15:24.05:0,24,273	1/1:13,5:18:36.12:494,36,0	0/0:11,0:11:21.06:0,21,248	1/1:9,5:14:42.13:553,42,0	1/1:5,13:18:42.09:533,42,0	0/0:13,0:13:36.10:0,36,418	0/0:6,0:6:15.02:0,15,150	0/0:7,0:7:18.06:0,18,215	0/0:6,0:6:12.03:0,12,138	0/0:7,0:7:12.01:0,12,125	1/1:0,9:8:6.02:83,6,0	0/0:13,0:13:33.09:0,33,390	0/0:19,0:19:20.91:0,21,462	0/0:14,0:14:41.99:0,42,450	1/1:3,6:9:6.02:84,6,0	0/0:7,0:7:18.05:0,18,214	0/0:12,0:12:24.06:0,24,266	0/0:6,0:6:14.97:0,15,154	0/0:6,0:6:12.04:0,12,138	1/1:15,5:20:48.15:652,48,0	0/0:13,0:13:29.94:0,30,338	1/1:0,13:13:21.07:287,21,0
chr10	88142543	.	C	CTTTTCT	4877.86	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-3.289;DP=453;FS=1.181;HRun=0;HaplotypeScore=104.5751;InbreedingCoeff=0.9273;MQ=72.57;MQ0=5;MQRankSum=-6.238;QD=29.38;ReadPosRankSum=-2.357;VQSLOD=4.2816;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:18.05:0,18,293	0/0:6,0:6:18.04:0,18,288	0/0:29,0:19:31.44:0,31,466	0/0:43,0:17:9.28:0,9,258	1/1:7,13:20:21.54:486,22,0	0/0:10,0:10:24.08:0,24,425	0/0:14,0:14:22.25:0,22,346	0/0:28,0:27:45.15:0,45,729	1/1:3,8:11:6.02:200,6,0	0/0:17,0:17:39.12:0,39,596	0/0:18,0:18:45.14:0,45,759	0/0:9,0:9:18.06:0,18,262	1/1:8,7:16:15.05:443,15,0	0/0:7,0:7:18.06:0,18,311	1/1:10,2:10:15.05:441,15,0	1/1:5,12:17:18.06:593,18,0	0/0:18,0:17:30.10:0,30,528	0/0:22,0:22:39.04:0,39,605	1/1:11,1:11:21.03:409,21,0	1/1:5,14:19:21.07:573,21,0	0/0:5,0:5:12.04:0,12,212	0/0:13,0:13:36.12:0,36,631	1/1:8,2:10:15.05:429,15,0	1/1:3,4:7:3.01:100,3,0	1/1:4,9:13:12.04:339,12,0	0/0:18,0:18:27.06:0,27,397	1/1:9,18:26:27.01:865,27,0	0/0:20,0:20:45.15:0,45,771
chr10	88142554	.	C	CT	903.31	PASS	AB=0.929;AC=12;AF=0.214;AN=56;BaseQRankSum=7.851;DP=471;FS=1.848;HRun=5;HaplotypeScore=89.7270;InbreedingCoeff=-0.0627;MQ=68.89;MQ0=10;MQRankSum=-5.113;QD=5.38;ReadPosRankSum=3.032;VQSLOD=-0.3229;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:11:11.93:0,12,167	0/0:7,0:7:21.04:0,21,228	0/0:34,0:20:28.30:0,28,336	0/0:49,0:18:9.45:0,9,206	1/1:17,2:19:3.34:248,3,0	0/0:9,0:9:24.07:0,24,272	0/0:15,0:15:32.20:0,32,400	0/0:27,0:26:53.97:0,54,572	0/1:11,0:11:17.94:18,0,24	0/0:19,0:19:46.01:0,46,506	0/0:22,0:22:60.08:0,60,658	0/0:9,0:9:21.06:0,21,237	0/1:13,0:13:22.25:46,0,22	0/0:8,0:8:24.07:0,24,269	0/1:8,3:13:54.77:87,0,55	0/1:18,1:18:47.09:109,0,47	0/0:21,0:18:32.98:0,33,347	0/0:24,0:24:54.05:0,54,578	0/1:11,3:12:99:157,0,104	0/1:19,0:19:72.38:136,0,72	0/0:4,0:4:12.03:0,12,136	0/0:13,0:12:36.10:0,36,408	0/1:8,2:10:75.57:76,0,137	0/1:8,0:8:5.83:6,0,83	0/1:12,0:12:24.68:25,0,52	0/0:14,0:13:36.09:0,36,392	0/1:28,0:26:3.68:145,0,4	0/0:15,0:15:45.13:0,45,508
chr10	88142571	.	T	TC	3031.98	PASS	AB=0.976;AC=41;AF=0.732;AN=56;BaseQRankSum=-2.639;DP=468;FS=54.091;HRun=0;HaplotypeScore=78.9247;InbreedingCoeff=0.1558;MQ=48.03;MQ0=16;MQRankSum=2.339;QD=8.31;ReadPosRankSum=3.230;VQSLOD=1.6305;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:11:28.17:0,28,200	1/1:5,0:5:14.72:103,15,0	0/0:44,0:8:21.06:0,21,179	0/0:45,0:11:4.85:0,5,46	0/1:15,2:17:43.29:43,0,48	1/1:8,0:8:21.15:131,21,0	1/1:12,0:12:9:108,9,0	1/1:24,0:23:33.71:292,34,0	0/1:11,0:11:23.72:29,0,24	1/1:15,0:15:33.91:247,34,0	1/1:24,0:24:54.47:337,54,0	1/1:9,0:9:6.83:125,7,0	0/1:9,0:9:15.19:53,0,15	1/1:10,0:9:23.19:136,23,0	1/1:11,4:13:6.40:78,6,0	1/1:17,1:17:12.10:107,12,0	0/1:20,1:18:9.13:67,0,9	0/1:21,0:21:46.05:147,0,46	0/1:17,0:14:55.22:103,0,55	1/1:21,1:22:4.62:107,5,0	1/1:4,0:4:11.79:76,12,0	1/1:17,0:16:32.89:255,33,0	1/1:14,0:14:9.91:117,10,0	0/1:8,0:8:1.08:38,0,1	0/1:12,0:12:4:45,0,4	1/1:12,0:11:6.36:169,6,0	0/1:26,2:27:0.45:152,0,0	1/1:12,0:12:15.96:128,16,0
chr10	88143208	.	GA	G	4374.59	PASS	AB=0.886;AC=24;AF=0.429;AN=56;BaseQRankSum=2.007;DP=586;FS=0.693;HRun=11;HaplotypeScore=70.2668;InbreedingCoeff=0.8314;MQ=72.11;MQ0=0;MQRankSum=1.699;QD=15.68;ReadPosRankSum=2.777;VQSLOD=5.6293;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:29:60.02:0,60,831	0/0:12,0:12:24.06:0,24,256	0/0:12,0:11:20.84:0,21,201	0/0:20,0:21:14.91:0,15,172	1/1:2,33:36:99:819,101,0	0/0:1,0:28:71.05:0,71,356	0/0:3,1:13:7.04:0,7,136	0/0:32,0:32:78.20:0,78,832	1/1:1,15:16:38.95:320,39,0	0/0:24,1:26:44.35:0,44,654	0/0:21,1:22:32.50:0,32,550	0/0:2,0:17:37.09:0,37,202	1/1:2,24:26:65.88:542,66,0	0/0:4,0:18:42.88:0,43,220	1/1:1,15:16:12.97:313,13,0	1/1:2,20:22:53.92:443,54,0	0/1:23,3:26:4.76:5,0,571	0/0:4,0:17:43.18:0,43,267	1/1:1,8:9:23.95:197,24,0	1/1:2,22:24:53.88:443,54,0	0/0:11,0:12:29.94:0,30,302	0/0:11,0:33:71.91:0,72,390	1/1:7,14:21:38.94:320,39,0	1/1:3,11:14:3.97:239,4,0	1/1:3,16:19:18.94:362,19,0	0/1:24,4:28:20.39:20,0,620	1/1:6,15:22:43.97:351,44,0	0/0:13,0:15:35.92:0,36,366
chr10	88144177	.	AG	A	1111.69	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.990;DP=516;FS=12.073;HRun=2;HaplotypeScore=47.4692;InbreedingCoeff=0.9750;MQ=73.58;MQ0=0;MQRankSum=-1.241;QD=33.69;ReadPosRankSum=0.884;VQSLOD=2.5239;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:93.30:1207,93,0	0/0:6,0:6:18.06:0,18,270	0/0:14,0:14:42.09:0,42,575	0/0:12,0:12:33.04:0,33,447	0/0:18,0:18:54.18:0,54,809	0/0:28,0:28:81.27:0,81,1209	0/0:20,0:20:60.20:0,60,898	0/0:38,0:38:99:0,114,1690	0/0:20,0:20:60.19:0,60,870	0/0:16,0:16:45.15:0,45,674	0/0:11,0:11:30.10:0,30,450	0/0:17,0:17:51.16:0,51,744	0/0:15,0:15:45.15:0,45,674	0/0:20,0:20:60.20:0,60,889	0/0:19,0:19:57.17:0,57,813	0/0:16,0:16:48.16:0,48,719	0/0:28,0:28:84.27:0,84,1238	0/0:24,0:24:72.23:0,72,1058	0/0:31,0:31:90.25:0,90,1273	0/0:12,0:12:33.11:0,33,493	0/0:23,0:23:69.19:0,69,1006	0/0:6,0:6:18.06:0,18,270	0/0:6,0:6:18.05:0,18,250	0/0:16,0:16:45.14:0,45,653	0/0:15,0:15:45.14:0,45,653	0/0:24,0:24:72.23:0,72,1058	0/0:18,0:18:54.17:0,54,786	0/0:10,0:10:30.10:0,30,447
chr10	88144900	.	CT	C	1223.37	PASS	AB=1.000;AC=23;AF=0.426;AN=54;BaseQRankSum=-2.473;DP=324;FS=1.953;HRun=3;HaplotypeScore=58.2860;InbreedingCoeff=0.8245;MQ=50.40;MQ0=28;MQRankSum=-1.107;QD=9.48;ReadPosRankSum=-1.345;VQSLOD=0.6162;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,1:15:17.93:153,18,0	0/0:6,0:4:11.53:0,12,66	0/1:10,0:4:1.02:1,0,25	0/0:11,0:7:8.82:0,9,46	1/1:18,1:18:20.72:148,21,0	0/0:19,0:16:26.07:0,26,256	0/0:6,0:5:11.79:0,12,76	0/0:24,0:16:40.94:0,41,254	1/1:11,0:11:11.93:95,12,0	0/0:15,0:13:34.78:0,35,212	0/0:17,0:16:43.57:0,44,255	0/0:8,0:8:16.88:0,17,96	1/1:3,0:3:2.99:24,3,0	0/0:5,0:5:8.56:0,9,46	1/1:6,0:6:8.86:59,9,0	1/1:8,0:8:17.82:127,18,0	0/0:18,0:16:40.90:0,41,251	0/0:24,0:24:49.16:0,49,298	1/1:15,0:15:31.94:235,32,0	1/1:12,0:11:23.69:165,24,0	0/0:1,0:1:2.97:0,3,20	0/0:3,0:3:8.72:0,9,52	./.	1/1:5,0:5:3:25,3,0	1/1:9,0:9:20.77:152,21,0	0/0:20,0:17:46.49:0,46,274	1/1:14,0:13:23.61:243,24,0	0/0:13,0:9:23.26:0,23,134
chr10	88144902	.	TTAAA	T	2210.92	PASS	AB=0.925;AC=26;AF=0.481;AN=54;BaseQRankSum=-0.262;DP=323;FS=0.527;HRun=0;HaplotypeScore=65.2875;InbreedingCoeff=0.4924;MQ=50.88;MQ0=25;MQRankSum=0.829;QD=11.40;ReadPosRankSum=2.340;VQSLOD=1.9404;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:3,0:15:8.62:30,0,9	0/1:5,0:4:12.93:13,0,21	0/0:14,0:4:5.04:0,5,68	0/0:12,0:7:18.90:0,19,212	1/1:2,14:17:20.72:236,21,0	0/0:18,0:16:42.10:0,42,392	0/0:5,0:5:11.96:0,12,106	0/0:24,0:16:37.84:0,38,245	1/1:0,11:11:11.97:183,12,0	0/1:15,0:13:1.63:82,0,2	0/1:17,0:16:51.91:52,0,101	0/0:7,0:7:17.24:0,17,114	1/1:0,3:3:3.01:53,3,0	0/0:4,0:4:8.97:0,9,76	1/1:0,5:6:8.88:88,9,0	1/1:4,3:8:17.87:203,18,0	0/1:18,0:16:19.99:92,0,20	0/0:23,0:23:46.19:0,46,369	1/1:0,15:16:36.26:342,36,0	1/1:6,4:10:19.54:222,20,0	0/0:2,0:2:2.50:0,2,9	0/0:3,0:3:9:0,9,83	./.	1/1:0,5:5:2.84:54,3,0	1/1:7,2:9:20.78:210,21,0	0/1:21,0:18:2.66:3,0,138	1/1:4,10:13:33.04:537,33,0	0/0:12,0:9:18.56:0,19,73
chr10	88145443	.	G	GA	1448.75	PASS	AB=0.715;AC=19;AF=0.339;AN=56;BaseQRankSum=-5.181;DP=577;FS=5.050;HRun=15;HaplotypeScore=99.2650;InbreedingCoeff=0.5933;MQ=56.00;MQ0=11;MQRankSum=-0.201;QD=5.66;ReadPosRankSum=-2.946;VQSLOD=2.0700;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,3:36:17.58:0,18,209	0/0:3,0:10:12.20:0,12,35	0/1:17,0:7:1.49:1,0,20	0/0:20,0:7:4.89:0,5,34	0/1:8,12:21:27.40:96,0,27	0/0:2,0:14:22.39:0,22,64	0/0:3,0:19:24.43:0,24,70	0/0:15,0:25:15.59:0,16,46	1/1:6,11:17:19.68:152,20,0	0/0:13,0:29:32.71:0,33,104	0/0:3,1:11:9.91:0,10,30	0/0:5,0:15:18.31:0,18,52	1/1:12,7:19:8.98:73,9,0	0/0:2,0:16:24.63:0,25,71	0/1:5,9:16:0.92:119,0,1	1/1:6,10:15:12.08:119,12,0	0/0:6,0:31:50.64:0,51,165	0/0:4,0:13:16.24:0,16,46	1/1:16,12:29:23.55:271,24,0	1/1:9,11:20:4.92:142,5,0	0/0:8,0:13:5.58:0,6,17	0/0:10,0:30:34.51:0,35,99	0/1:15,10:24:5.32:65,0,5	1/1:7,16:25:14.61:320,15,0	0/1:8,14:22:45.27:86,0,45	0/0:10,0:22:21.56:0,22,63	1/1:6,18:25:11.78:192,12,0	0/0:7,0:11:15.06:0,15,43
chr10	88145596	.	G	GTC	1138.68	PASS	AB=0.993;AC=25;AF=0.463;AN=54;BaseQRankSum=-1.270;DP=1002;FS=0.473;HRun=0;HaplotypeScore=237.2680;InbreedingCoeff=-0.3369;MQ=32.54;MQ0=33;MQRankSum=-0.412;QD=1.60;ReadPosRankSum=1.317;VQSLOD=2.4939;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:26.34:0,26,214	0/0:22,0:20:10.17:0,10,77	0/0:25,0:6:15.72:0,16,101	0/0:45,0:10:25.65:0,26,226	./.	0/1:24,0:23:16.32:16,0,40	0/1:33,3:32:41.84:242,0,42	0/1:31,0:27:99:241,0,180	1/1:26,0:24:8.78:56,9,0	0/0:82,0:72:67.85:0,68,775	1/1:44,0:40:0.76:2,1,0	0/1:23,1:21:17.94:68,0,18	0/1:23,0:22:55.34:55,0,178	1/1:15,0:15:2.98:22,3,0	0/1:34,0:34:10.21:44,0,10	0/1:27,0:27:38.06:38,0,58	0/0:24,0:23:20.12:0,20,158	0/1:15,0:13:39.06:88,0,39	0/1:19,0:14:42.04:42,0,234	0/1:52,0:50:7.34:7,0,81	0/1:43,0:37:21.26:129,0,21	0/1:61,0:57:7.05:7,0,99	0/1:55,0:50:14.09:35,0,14	0/1:26,0:24:10.12:10,0,58	1/1:51,0:48:2.70:26,3,0	0/1:48,0:41:52.73:53,0,346	0/1:34,0:33:65.95:66,0,214	0/1:25,0:24:46.22:48,0,46
chr10	88145610	.	GTGTA	G	984.23	PASS	AB=0.970;AC=21;AF=0.375;AN=56;BaseQRankSum=4.791;DP=1156;FS=56.881;HRun=0;HaplotypeScore=275.8248;InbreedingCoeff=-0.2064;MQ=31.30;MQ0=37;MQRankSum=-1.741;QD=1.27;ReadPosRankSum=-0.246;VQSLOD=0.7539;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:49,0:48:15.61:16,0,544	0/1:23,1:22:0.65:2,0,1	0/0:28,0:2:6.02:0,6,132	0/0:38,0:1:2.98:0,3,21	1/1:51,7:57:2.98:21,3,0	0/0:37,0:36:17.95:0,18,395	0/1:40,2:38:29.16:29,0,548	0/0:41,0:30:34.25:0,34,1162	1/1:28,0:26:4.29:26,4,0	0/1:85,9:83:99:418,0,1373	0/0:51,3:48:9.03:0,9,242	0/0:26,0:23:12.38:0,12,211	0/1:29,0:28:28.68:29,0,152	0/0:23,0:23:1.69:0,2,46	0/1:40,1:40:4.69:86,0,5	0/1:38,0:38:42.89:43,0,55	0/1:21,0:21:24.13:24,0,288	0/0:20,0:19:9.39:0,9,383	0/1:21,0:17:48.61:49,0,171	0/1:55,1:54:16.35:50,0,16	0/0:46,0:38:18.49:0,18,366	0/0:65,6:66:27.09:0,27,607	0/1:55,6:57:32.64:54,0,33	0/1:25,0:23:14.33:14,0,38	1/1:57,3:56:7.21:50,7,0	0/1:56,5:54:99:128,0,1117	0/1:39,0:37:25.31:25,0,215	0/1:23,2:24:77.55:78,0,196
chr10	88145612	.	GTA	G	1173.47	PASS	AB=0.969;AC=22;AF=0.393;AN=56;BaseQRankSum=5.525;DP=1171;FS=30.923;HRun=0;HaplotypeScore=263.2898;InbreedingCoeff=-0.1804;MQ=31.20;MQ0=36;MQRankSum=-1.489;QD=1.50;ReadPosRankSum=-0.248;VQSLOD=0.9075;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:49,1:48:59.25:59,0,414	1/1:25,0:23:3.79:24,4,0	0/0:30,0:2:6.02:0,6,114	0/0:37,0:1:2.98:0,3,22	1/1:58,1:58:2.98:21,3,0	0/0:37,0:36:17.96:0,18,331	0/1:43,0:39:80.85:81,0,422	0/0:40,0:28:54.03:0,54,922	1/1:26,0:24:6.85:48,7,0	0/1:94,1:83:99:208,0,1095	0/0:52,1:48:9.03:0,9,174	0/0:27,0:24:7.12:0,7,177	0/1:28,1:28:43.18:43,0,166	0/0:24,0:24:2.96:0,3,24	0/1:38,3:40:3.86:126,0,4	0/1:35,3:38:47.05:47,0,47	0/1:22,0:22:39.14:39,0,240	0/0:22,0:21:7.36:0,7,320	0/1:22,1:19:96.64:97,0,129	0/1:51,3:55:34.14:38,0,34	0/0:49,0:41:20.71:0,21,285	0/0:68,0:65:27.08:0,27,474	0/1:61,1:58:25.63:93,0,26	0/1:24,1:23:14.32:14,0,41	1/1:58,2:57:8.23:65,8,0	0/1:58,4:55:99:209,0,893	0/1:38,1:37:62.20:62,0,166	0/1:24,0:23:62.74:63,0,167
chr10	88145618	.	GTGTC	G	830.07	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=3.428;DP=1239;FS=0.927;HRun=0;HaplotypeScore=289.4151;InbreedingCoeff=0.2436;MQ=30.97;MQ0=43;MQRankSum=-2.081;QD=1.16;ReadPosRankSum=-0.384;VQSLOD=1.7664;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:53,0:51:17.48:17,0,615	0/1:25,0:23:0.68:1,0,1	0/0:31,0:2:6.02:0,6,125	0/0:34,0:1:3.01:0,3,58	1/1:62,0:59:2.98:21,3,0	0/0:41,0:40:23.94:0,24,556	0/0:42,0:38:15.87:0,16,668	0/0:46,0:32:82.75:0,83,1638	1/1:28,0:25:3.41:25,3,0	0/1:98,0:86:99:121,0,1765	0/0:59,0:53:12.04:0,12,314	0/0:27,0:24:8.27:0,8,350	0/1:28,0:27:95.64:99,0,96	0/0:30,0:30:8.93:0,9,155	1/1:47,0:45:16.46:129,16,0	0/1:40,0:40:36.38:36,0,48	0/1:21,0:21:9.24:9,0,301	0/0:20,0:19:32.67:0,33,639	0/1:26,0:22:99:118,0,152	1/1:59,0:57:4.74:44,5,0	0/0:50,0:42:21.04:0,21,505	0/0:77,0:72:27.09:0,27,724	1/1:64,3:63:23.34:161,23,0	1/1:28,1:27:8.98:72,9,0	1/1:65,0:61:8.60:63,9,0	0/0:68,0:59:59.72:0,60,1739	0/1:42,0:40:81.16:81,0,319	0/1:24,0:23:8.63:9,0,331
chr10	88145620	.	GTC	G	1110.98	PASS	AB=0.987;AC=26;AF=0.464;AN=56;BaseQRankSum=4.300;DP=1244;FS=4.668;HRun=0;HaplotypeScore=276.3476;InbreedingCoeff=0.1045;MQ=30.94;MQ0=42;MQRankSum=-0.105;QD=1.34;ReadPosRankSum=-0.744;VQSLOD=1.8537;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:54,0:52:53.24:53,0,444	1/1:25,0:23:3.93:40,4,0	0/0:31,0:2:6.02:0,6,115	0/0:32,0:1:3.01:0,3,57	1/1:58,3:58:2.98:21,3,0	0/0:41,0:40:23.95:0,24,417	0/1:41,0:37:15.24:15,0,465	0/0:46,1:33:70.02:0,70,1304	1/1:29,0:26:5.97:48,6,0	0/1:96,2:85:99:138,0,1429	0/0:59,0:53:12.04:0,12,231	0/0:26,0:23:2.48:0,2,281	0/1:28,0:27:45.45:45,0,108	0/0:30,0:30:8.96:0,9,130	1/1:46,0:44:17.12:145,17,0	0/1:39,1:40:36.91:37,0,43	0/1:21,0:21:17.07:17,0,190	0/0:23,0:22:18.67:0,19,445	0/1:27,2:25:99:147,0,217	1/1:59,0:57:5.27:45,5,0	0/0:51,0:43:21.04:0,21,368	0/0:75,2:72:27.09:0,27,515	1/1:65,1:62:26.84:203,27,0	1/1:29,0:27:5.88:48,6,0	1/1:65,0:61:8.48:72,8,0	0/1:70,0:61:32.91:33,0,1181	0/1:41,1:40:99:100,0,342	0/1:24,0:23:82.39:82,0,207
chr10	88145622	.	CTG	C	214.94	PASS	AB=0.986;AC=20;AF=0.357;AN=56;BaseQRankSum=5.030;DP=1260;FS=10.011;HRun=0;HaplotypeScore=284.0695;InbreedingCoeff=0.1449;MQ=30.89;MQ0=43;MQRankSum=-2.904;QD=0.31;ReadPosRankSum=0.956;VQSLOD=1.1007;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:53,0:51:9.73:10,0,417	1/1:25,0:23:1.60:24,2,0	0/0:31,0:2:6.02:0,6,96	0/0:30,0:1:3.01:0,3,52	1/1:60,0:57:1.82:5,2,0	0/0:42,0:41:24.94:0,25,412	0/0:42,1:39:9.96:0,10,465	0/0:50,0:35:88.08:0,88,1181	0/0:33,0:30:0.48:0,0,1	0/1:93,7:87:95.13:95,0,1383	0/0:55,4:53:12.04:0,12,208	0/0:27,0:24:9.04:0,9,244	0/1:26,1:26:1.96:2,0,131	0/0:31,0:31:8.97:0,9,142	1/1:47,0:45:11.62:47,12,0	0/1:38,0:39:1.41:1,0,55	0/1:21,0:21:15.70:16,0,156	0/0:23,0:22:26.74:0,27,432	0/1:29,0:25:10.83:11,0,297	0/1:59,1:58:3.73:4,0,29	0/0:53,0:44:18.06:0,18,312	0/0:74,5:74:27.09:0,27,463	1/1:65,0:62:10.86:43,11,0	0/1:28,0:26:2.27:2,0,15	1/1:65,1:62:6.60:23,7,0	0/0:71,0:62:11.27:0,11,1262	0/1:43,0:41:17.96:18,0,376	0/1:24,0:23:68.69:69,0,194
chr10	88145656	.	A	ATG	1069.38	PASS	AB=0.905;AC=10;AF=0.179;AN=56;BaseQRankSum=8.806;DP=1263;FS=50.524;HRun=0;HaplotypeScore=265.4547;InbreedingCoeff=-0.2593;MQ=32.38;MQ0=24;MQRankSum=-5.108;QD=2.67;ReadPosRankSum=0.195;VQSLOD=1.1952;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,6:44:21.73:0,22,316	0/0:23,0:23:5.62:0,6,51	0/0:42,0:7:15.01:0,15,183	0/0:37,0:7:17.07:0,17,179	0/0:49,5:52:3.01:0,3,40	0/0:32,0:39:23.59:0,24,318	0/0:38,0:35:36.12:0,36,477	0/0:47,1:36:52.59:0,53,679	0/1:27,6:32:25.96:26,0,86	0/1:75,0:73:99:398,0,626	0/0:57,1:57:11.91:0,12,154	0/1:29,0:28:15.69:16,0,142	0/1:25,2:26:90.53:111,0,91	0/0:25,0:38:13.61:0,14,140	0/0:42,10:50:8.64:0,9,119	0/1:31,15:45:29.39:29,0,87	0/0:21,0:21:12.78:0,13,246	0/1:22,0:22:51.13:51,0,387	0/1:27,3:30:94.87:95,0,427	0/0:55,4:58:8.82:0,9,120	0/0:54,0:46:15.05:0,15,192	0/0:76,1:78:27.09:0,27,359	0/0:60,3:60:21.07:0,21,279	0/0:24,1:24:3.01:0,3,40	0/0:72,1:69:6.34:0,6,80	0/1:60,0:52:85.61:86,0,677	0/1:29,14:41:99:273,0,106	0/1:28,1:28:99:127,0,229
chr10	88145672	.	GTGCA	G	1700.84	PASS	AB=0.980;AC=17;AF=0.304;AN=56;BaseQRankSum=8.553;DP=1095;FS=4.929;HRun=0;HaplotypeScore=236.0057;InbreedingCoeff=0.0164;MQ=32.57;MQ0=16;MQRankSum=-5.893;QD=3.53;ReadPosRankSum=1.063;VQSLOD=2.4305;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,2:40:4.25:0,4,640	1/1:19,1:18:1.61:6,2,0	0/0:62,0:13:31.79:0,32,718	0/0:44,0:11:26.30:0,26,609	0/0:41,2:42:3.01:0,3,84	0/0:35,0:35:25.60:0,26,606	0/0:26,0:26:29.84:0,30,751	0/1:38,0:33:99:180,0,140	0/0:29,0:29:7.09:0,7,170	0/1:57,4:56:63.65:422,0,64	0/1:49,0:50:2.22:3,0,2	0/1:26,1:25:0.23:0,0,320	0/1:25,0:25:16.69:17,0,240	0/0:33,0:33:12.67:0,13,298	0/0:43,2:43:8.88:0,9,252	0/1:41,0:40:49.54:50,0,156	1/1:18,0:18:20.78:90,21,0	0/1:19,0:19:11.89:12,0,852	0/1:23,1:21:58.68:59,0,776	0/0:47,0:47:9.03:0,9,252	0/1:47,1:42:10.30:10,0,32	0/0:72,1:68:27.09:0,27,717	0/0:47,2:49:21.07:0,21,588	0/0:23,0:22:3.01:0,3,84	0/0:53,3:59:6:0,6,168	0/1:39,0:35:69.47:303,0,69	0/1:38,0:36:99:117,0,349	1/1:25,2:28:57.64:590,58,0
chr10	88145673	.	TGC	T	600.99	PASS	AB=0.974;AC=10;AF=0.179;AN=56;BaseQRankSum=9.034;DP=1013;FS=19.177;HRun=0;HaplotypeScore=210.8830;InbreedingCoeff=0.0231;MQ=32.83;MQ0=16;MQRankSum=-5.538;QD=2.09;ReadPosRankSum=1.119;VQSLOD=1.1678;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:39:12.36:0,12,471	0/0:18,0:15:1.74:0,2,4	0/0:62,0:13:32.83:0,33,515	0/0:44,0:11:26.87:0,27,424	0/0:35,0:35:3.01:0,3,61	0/0:35,0:35:24.84:0,25,446	0/0:25,0:25:29.97:0,30,557	0/1:36,0:31:8.28:8,0,90	0/0:28,0:28:6.02:0,6,122	0/1:51,0:46:99:108,0,153	0/0:44,2:44:4.59:0,5,15	0/0:27,0:25:4.02:0,4,231	0/1:20,3:23:10.56:11,0,189	0/0:32,0:32:12.28:0,12,209	0/0:38,0:37:8.93:0,9,182	0/1:40,1:40:18.44:18,0,112	0/1:15,0:15:1.41:38,0,1	0/0:19,0:19:31.49:0,31,653	0/1:22,1:20:91.44:91,0,443	0/0:41,0:41:9.03:0,9,183	0/0:47,0:41:13.39:0,13,68	0/0:65,1:62:27.09:0,27,536	0/0:43,0:42:21.07:0,21,425	0/0:19,2:20:3.01:0,3,61	0/0:57,0:55:5.99:0,6,122	0/1:34,1:32:99:153,0,115	0/1:36,0:35:42.44:42,0,219	1/1:27,1:27:14.54:272,15,0
chr10	88145674	.	GCAT	G	2561.19	PASS	AB=0.682;AC=13;AF=0.232;AN=56;BaseQRankSum=1.099;DP=877;FS=4.991;HRun=0;HaplotypeScore=175.8260;InbreedingCoeff=0.2589;MQ=33.44;MQ0=15;MQRankSum=-2.192;QD=9.18;ReadPosRankSum=-0.915;VQSLOD=3.1178;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:38:23.02:0,23,577	1/1:6,6:13:1.62:54,2,0	0/0:63,0:13:33.58:0,34,747	0/0:43,0:11:27.50:0,27,604	0/0:17,0:25:3.01:0,3,74	0/0:26,0:32:21.91:0,22,514	0/0:20,0:21:26.96:0,27,632	0/1:13,18:30:99:728,0,217	0/0:19,0:24:10.69:0,11,171	0/1:15,15:32:99:571,0,149	1/1:24,10:38:5.39:97,5,0	0/0:18,0:19:15.01:0,15,315	0/0:12,0:15:7.25:0,7,289	0/0:26,0:31:15.45:0,15,280	0/0:28,0:31:9.03:0,9,222	0/1:30,0:38:4.86:5,0,149	1/1:2,10:13:0.91:209,1,0	0/0:15,0:16:32.68:0,33,789	0/0:21,0:20:37.47:0,37,891	0/0:25,0:35:9.03:0,9,222	1/1:10,30:36:7.87:166,8,0	0/0:44,0:55:27.08:0,27,609	0/0:23,0:32:21.07:0,21,518	0/0:14,0:15:3.01:0,3,74	0/0:26,0:44:6.49:0,6,149	0/1:16,12:30:99:614,0,154	0/0:23,0:29:25.68:0,26,493	0/1:15,4:27:40.87:265,0,41
chr10	88145713	.	T	TG	206.67	PASS	AC=20;AF=1.000;AN=20;DP=55;FS=0.000;HRun=0;HaplotypeScore=8.5070;InbreedingCoeff=-0.1663;MQ=36.96;MQ0=0;QD=7.13;VQSLOD=2.8905;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	1/1:2,1:3:2.99:24,3,0	1/1:2,0:2:2.99:24,3,0	./.	1/1:2,0:2:3:25,3,0	1/1:5,0:4:2.97:20,3,0	1/1:1,0:1:2.99:23,3,0	./.	./.	1/1:6,0:6:5.99:48,6,0	./.	./.	./.	1/1:1,2:3:5.92:39,6,0	./.	1/1:2,0:2:3:25,3,0	1/1:4,0:4:2.99:24,3,0	./.	./.	./.	./.	1/1:1,0:1:3:25,3,0	./.	./.
chr10	88145799	.	TG	T	1191.30	PASS	AB=0.933;AC=9;AF=0.161;AN=56;BaseQRankSum=-0.269;DP=572;FS=1.217;HRun=9;HaplotypeScore=122.6483;InbreedingCoeff=0.6898;MQ=48.66;MQ0=13;MQRankSum=-3.039;QD=10.73;ReadPosRankSum=2.864;VQSLOD=2.4972;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:15.47:0,15,114	0/0:6,0:5:6.02:0,6,68	0/0:23,0:8:20.70:0,21,190	0/0:27,0:16:42.36:0,42,477	0/0:15,0:15:11.84:0,12,138	0/0:26,0:26:17.92:0,18,106	0/0:30,0:30:15.12:0,15,92	1/1:1,24:23:66.01:597,66,0	0/0:30,0:29:48.28:0,48,435	0/0:26,0:24:45.13:0,45,518	0/0:11,0:10:3.01:0,3,35	0/0:17,0:16:10.18:0,10,63	0/0:12,0:12:11.99:0,12,123	0/0:18,0:18:10.07:0,10,70	0/0:36,0:35:43.51:0,44,370	0/0:15,0:14:26.40:0,26,223	0/0:18,1:19:17.52:0,18,411	0/0:22,0:22:38.74:0,39,260	0/0:23,0:22:45.09:0,45,500	0/1:13,1:14:5.93:6,0,183	1/1:19,23:34:14.44:131,14,0	0/0:11,0:11:2.96:0,3,19	0/0:8,0:8:9.03:0,9,104	0/0:30,0:30:48.40:0,48,479	0/0:13,0:12:14.70:0,15,163	1/1:6,16:19:48.02:439,48,0	0/0:9,0:7:17.82:0,18,175	1/1:3,5:8:4.19:169,4,0
chr10	88146017	.	ATG	A	1554.84	PASS	AB=0.857;AC=11;AF=0.220;AN=50;BaseQRankSum=-6.190;DP=680;FS=9.799;HRun=0;HaplotypeScore=139.0011;InbreedingCoeff=0.5810;MQ=52.01;MQ0=7;MQRankSum=4.840;QD=8.99;ReadPosRankSum=1.156;VQSLOD=3.0688;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:28:2.99:0,3,23	0/0:8,0:10:9.96:0,10,99	./.	./.	0/1:33,0:33:3.35:3,0,48	1/1:9,7:15:17.81:199,18,0	0/1:16,4:21:15.80:215,0,16	0/0:35,0:34:18.01:0,18,139	0/0:27,0:27:19.25:0,19,216	0/0:32,0:32:35:0,35,326	./.	1/1:15,6:22:38.13:375,38,0	0/0:23,0:23:29.86:0,30,221	0/1:22,9:31:38.35:349,0,38	0/0:28,0:28:19.94:0,20,194	0/0:24,0:23:23.01:0,23,237	0/0:4,0:18:23.51:0,24,209	1/1:19,5:25:30.03:375,30,0	0/0:31,0:30:29.48:0,29,241	0/0:32,0:32:9.46:0,9,75	0/0:32,0:37:53.41:0,53,484	1/1:18,6:24:18.05:199,18,0	0/0:19,0:19:2.99:0,3,24	0/0:31,0:31:27.47:0,27,217	0/0:20,0:20:8.87:0,9,60	0/0:26,0:27:29.77:0,30,237	0/0:18,0:18:19.51:0,20,143	0/0:7,0:9:13.62:0,14,90
chr10	88146041	.	G	GTGTGTT	7923.71	PASS	AB=0.946;AC=22;AF=0.393;AN=56;BaseQRankSum=-0.360;DP=716;FS=0.000;HRun=0;HaplotypeScore=190.3485;InbreedingCoeff=0.8219;MQ=47.79;MQ0=10;MQRankSum=-2.858;QD=26.15;ReadPosRankSum=-2.457;VQSLOD=4.2376;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:5.98:0,6,47	0/0:12,0:12:12.94:0,13,94	0/0:26,0:11:30.01:0,30,275	0/0:31,0:12:35.68:0,36,319	0/1:29,1:33:35.52:310,0,36	0/0:15,0:14:16.63:0,17,261	0/0:22,0:22:35.91:0,36,463	0/0:31,0:30:76.90:0,77,622	1/1:18,9:29:70.25:1071,70,0	0/0:32,0:29:50.46:0,50,478	0/0:17,0:16:8.98:0,9,72	0/0:24,0:23:45.34:0,45,565	1/1:13,8:23:59.14:1048,59,0	0/0:33,0:32:67.91:0,68,865	1/1:21,5:28:59.63:943,60,0	1/1:15,9:24:66.87:1178,67,0	0/0:25,0:25:49.58:0,50,302	0/0:29,0:29:74.84:0,75,781	1/1:21,3:22:36.24:800,36,0	1/1:34,3:38:22.58:415,23,0	0/0:38,0:37:62.68:0,63,446	0/0:29,0:27:20.80:0,21,265	1/1:20,0:20:22.72:257,23,0	1/1:33,2:36:46.13:795,46,0	1/1:15,1:16:29.07:368,29,0	0/0:27,0:27:34.47:0,34,386	1/1:11,7:17:41.64:720,42,0	0/1:12,0:11:19.62:20,0,27
chr10	88146656	.	T	TG	9648.86	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-15.193;DP=637;FS=5.903;HRun=5;HaplotypeScore=76.4282;InbreedingCoeff=0.9997;MQ=93.03;MQ0=0;MQRankSum=-7.860;QD=35.09;ReadPosRankSum=4.819;VQSLOD=4.7109;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,37:42:99:1366,105,0	0/0:12,0:12:33.04:0,33,336	0/0:32,0:31:80.15:0,80,749	0/0:27,0:25:63.84:0,64,579	1/1:1,15:16:48.15:621,48,0	0/0:25,0:25:72.18:0,72,774	0/0:19,0:19:51.13:0,51,548	0/0:32,0:32:87.22:0,87,935	1/1:3,21:24:60.20:790,60,0	0/0:22,0:22:60.15:0,60,639	0/0:29,0:29:78.18:0,78,830	0/0:12,0:12:33.08:0,33,354	1/1:1,26:28:75.24:982,75,0	0/0:18,0:18:51.11:0,51,540	1/1:1,18:19:54.18:711,54,0	1/1:0,18:18:51.09:671,51,0	0/0:23,0:23:63.16:0,63,677	0/0:20,0:20:54.10:0,54,568	1/1:0,17:17:51.15:655,51,0	1/1:1,21:22:60.19:786,60,0	0/0:44,0:44:99:0,126,1343	0/0:16,0:16:39.10:0,39,419	1/1:2,13:15:33.11:434,33,0	1/1:2,17:19:54.17:706,54,0	1/1:2,19:20:57.18:745,57,0	0/0:22,0:22:63.13:0,63,652	1/1:3,31:34:90.29:1184,90,0	0/0:9,0:9:27.07:0,27,290
chr10	88148282	.	G	GT	795.89	PASS	AB=0.838;AC=16;AF=0.286;AN=56;BaseQRankSum=-0.114;DP=523;FS=1.060;HRun=14;HaplotypeScore=73.1416;InbreedingCoeff=-0.0722;MQ=77.28;MQ0=1;MQRankSum=2.534;QD=3.10;ReadPosRankSum=-2.599;VQSLOD=-0.3486;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,10:19:11.79:136,0,12	0/0:9,2:12:2.31:0,2,133	1/1:25,0:17:10.56:35,11,0	0/1:18,0:12:14.66:15,0,21	0/0:31,2:32:7.13:0,7,276	0/0:21,2:22:20.84:0,21,257	0/0:22,2:24:0.29:0,0,241	0/1:12,1:12:33.36:62,0,33	0/1:13,1:14:2.76:3,0,110	0/1:14,2:16:32.14:32,0,75	0/1:17,2:19:1.67:2,0,198	0/0:16,0:16:26.37:0,26,169	0/0:16,0:16:4.05:0,4,99	0/1:11,1:14:1.85:2,0,100	0/0:6,0:7:10.77:0,11,61	0/1:16,4:20:37.66:38,0,169	0/0:23,1:27:31.32:0,31,311	0/0:18,0:20:50.47:0,50,310	0/1:18,2:21:68.57:69,0,89	0/0:16,0:19:13.58:0,14,165	0/1:9,12:21:23.30:107,0,23	0/0:14,0:14:32.31:0,32,204	0/1:10,1:13:0.97:1,0,98	0/0:15,1:15:3.08:0,3,145	0/0:12,2:15:4.65:0,5,137	0/1:9,15:25:16.15:207,0,16	0/0:19,3:24:19.26:0,19,244	1/1:5,11:17:13.76:238,14,0
chr10	88150696	.	C	CTTCT	2276.74	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=0.694;DP=497;FS=1.470;HRun=0;HaplotypeScore=160.4864;InbreedingCoeff=0.0613;MQ=59.01;MQ0=2;MQRankSum=-2.528;QD=6.04;ReadPosRankSum=-4.037;VQSLOD=0.9969;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:9.34:19,0,9	0/0:8,0:8:21.07:0,21,323	0/0:24,0:21:14.48:0,14,85	0/0:16,0:10:1.02:0,1,30	1/1:22,0:22:6.19:79,6,0	0/1:25,0:24:28.60:62,0,29	0/1:20,0:20:13.82:14,0,94	1/1:18,0:18:13.73:194,14,0	0/1:15,0:15:20.29:30,0,20	0/0:24,0:24:57.17:0,57,869	0/0:14,0:14:9.09:0,9,425	0/1:20,0:20:35.88:47,0,36	1/1:20,0:20:17.21:124,17,0	0/1:24,0:24:14.92:42,0,15	0/1:19,0:19:7.21:40,0,7	1/1:16,0:16:6.77:82,7,0	0/0:18,0:18:23.89:0,24,346	0/0:5,0:5:15.02:0,15,156	0/0:11,0:10:3.43:0,3,21	1/1:18,0:18:3.62:11,4,0	1/1:7,0:7:9.03:184,9,0	0/1:18,0:18:6.67:62,0,7	0/1:11,0:11:14.54:15,0,22	0/1:18,0:18:9.97:10,0,37	0/1:21,0:21:3.90:113,0,4	1/1:8,19:27:57.18:1202,57,0	0/1:28,0:28:29.86:51,0,30	1/1:1,11:12:3.01:74,3,0
chr10	88151584	.	TTATCTATATCTATCTATCTATCTATC	T	1883.52	PASS	AB=0.723;AC=19;AF=0.413;AN=46;BaseQRankSum=-1.411;DP=367;FS=6.239;HRun=0;HaplotypeScore=120.9894;InbreedingCoeff=0.3977;MQ=55.67;MQ0=42;MQRankSum=-0.470;QD=12.64;ReadPosRankSum=4.812;VQSLOD=1.6737;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:15:2.96:0,3,19	0/0:2,4:5:0:0,0,0	0/0:19,0:13:30.10:0,30,454	0/0:16,0:11:20.08:0,20,248	0/0:6,0:17:9.03:0,9,213	1/1:2,8:10:3.01:36,3,0	./.	1/1:19,0:9:21.05:267,21,0	./.	1/1:3,15:18:27.08:792,27,0	./.	0/0:3,8:10:0.47:0,0,1	0/1:5,0:16:27.68:28,0,378	0/0:1,0:12:2.96:0,3,19	0/0:2,0:12:6.02:0,6,69	0/0:1,0:9:6.02:0,6,193	1/1:13,0:11:4.83:48,5,0	1/1:7,0:3:3.01:36,3,0	0/1:7,0:4:26.51:76,0,27	0/0:2,0:15:3.01:0,3,34	1/1:15,0:12:4.69:25,5,0	./.	1/1:14,0:8:3.01:43,3,0	./.	0/0:3,0:15:18.05:0,18,235	0/1:6,0:17:9.85:504,0,10	0/0:2,0:12:5.23:0,5,39	1/1:8,0:6:14.26:178,14,0
chr10	88151588	.	CTA	C	1850.72	PASS	AB=0.812;AC=39;AF=0.848;AN=46;BaseQRankSum=3.027;DP=349;FS=8.528;HRun=0;HaplotypeScore=55.0973;InbreedingCoeff=0.3972;MQ=47.51;MQ0=42;MQRankSum=-4.754;QD=6.73;ReadPosRankSum=-0.346;VQSLOD=1.5931;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,3:13:2.90:16,3,0	0/1:5,0:4:0:0,0,0	0/0:16,0:10:30.10:0,30,454	0/0:14,0:9:20.42:0,20,250	1/1:20,0:16:8.71:47,9,0	1/1:10,0:10:2.90:16,3,0	./.	1/1:1,15:7:21.05:279,21,0	./.	1/1:17,0:17:21.03:259,21,0	./.	0/1:10,1:10:0:0,0,0	1/1:17,0:15:11.69:90,12,0	1/1:12,0:12:2.90:16,3,0	1/1:14,0:12:5.81:31,6,0	1/1:10,0:9:5.83:33,6,0	0/1:1,13:12:22.55:76,0,23	1/1:2,5:3:4.26:39,4,0	1/1:0,6:3:9.03:128,9,0	1/1:15,0:14:2.90:16,3,0	1/1:1,14:12:6.18:85,6,0	./.	1/1:3,10:7:3.01:43,3,0	./.	1/1:16,0:14:14.51:82,15,0	1/1:20,0:17:36.01:446,36,0	1/1:13,0:12:5.91:58,6,0	1/1:1,7:6:15.05:214,15,0
chr10	88152121	.	G	GT	6369.74	PASS	AB=0.552;AC=23;AF=0.411;AN=56;BaseQRankSum=5.216;DP=525;FS=1.601;HRun=9;HaplotypeScore=65.9270;InbreedingCoeff=0.9300;MQ=79.25;MQ0=0;MQRankSum=-0.648;QD=24.22;ReadPosRankSum=2.401;VQSLOD=5.7465;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:21:45.12:498,45,0	0/0:9,0:9:26.97:0,27,230	0/0:18,0:15:18.36:0,18,206	0/0:19,0:17:23.76:0,24,198	1/1:5,27:32:75.16:814,75,0	0/0:16,0:16:44.97:0,45,386	0/0:11,0:11:29.94:0,30,248	0/0:29,0:29:74.95:0,75,644	1/1:2,21:23:60.16:664,60,0	0/0:17,1:19:13.84:0,14,332	0/0:20,0:20:53.98:0,54,469	0/0:8,0:8:18:0,18,156	0/1:3,13:16:6.96:378,0,7	0/0:15,0:15:41.95:0,42,365	1/1:6,20:26:15.93:523,16,0	1/1:1,9:10:24.06:266,24,0	0/0:16,0:16:41.99:0,42,365	0/0:8,0:8:20.99:0,21,182	1/1:4,12:16:36.10:398,36,0	1/1:5,22:28:62.97:666,63,0	0/0:12,0:12:29.96:0,30,256	0/0:15,0:15:41.99:0,42,365	1/1:2,17:20:24.92:486,25,0	1/1:1,13:14:36.10:398,36,0	1/1:5,19:24:51.14:564,51,0	0/0:31,0:31:83.97:0,84,727	1/1:7,26:32:45.81:715,46,0	0/0:16,0:16:47.99:0,48,416
chr10	88153141	.	TAAAACAAAACAAAAC	T	9830.84	PASS	AB=0.618;AC=37;AF=0.661;AN=56;BaseQRankSum=3.134;DP=616;FS=3.456;HRun=0;HaplotypeScore=251.4885;InbreedingCoeff=0.3491;MQ=63.73;MQ0=6;MQRankSum=-7.610;QD=21.42;ReadPosRankSum=-0.675;VQSLOD=3.5020;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,34:49:18.21:1157,18,0	1/1:6,3:9:6.02:249,6,0	0/0:24,0:21:6.49:0,6,102	0/0:28,0:16:11.07:0,11,168	0/0:10,0:27:0.08:0,0,142	1/1:7,10:17:27.09:1122,27,0	1/1:6,8:14:6.02:248,6,0	1/1:17,12:29:10.96:364,11,0	1/1:14,0:28:12.66:36,13,0	1/1:8,13:21:39.11:1239,39,0	1/1:8,12:20:27.09:973,27,0	1/1:6,14:20:15.05:585,15,0	1/1:9,0:18:5.05:13,5,0	1/1:8,14:22:15.05:623,15,0	0/1:6,0:16:14.15:14,0,118	0/1:12,0:31:20.07:20,0,36	0/1:13,10:23:36.04:484,0,36	0/1:3,9:12:16.07:362,0,16	0/0:14,0:18:18.06:0,18,601	0/0:15,0:26:45.14:0,45,1311	1/1:8,0:8:5.93:87,6,0	1/1:8,8:16:15.05:623,15,0	0/1:9,0:27:3.83:4,0,50	0/1:6,0:18:5.48:5,0,34	0/1:10,0:26:12.38:18,0,12	1/1:9,18:27:51.11:1354,51,0	0/0:11,0:33:54.18:0,54,1592	1/1:0,7:7:6.02:249,6,0
chr10	88153538	.	CT	C	2372.49	PASS	AB=0.889;AC=22;AF=0.393;AN=56;BaseQRankSum=-7.480;DP=628;FS=1.676;HRun=13;HaplotypeScore=93.0629;InbreedingCoeff=0.8375;MQ=70.24;MQ0=2;MQRankSum=-0.040;QD=9.23;ReadPosRankSum=0.383;VQSLOD=3.1230;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.76:0,73,428	0/0:10,1:12:11.26:0,11,250	0/1:21,3:16:27.95:28,0,92	0/1:14,2:12:44.50:44,0,61	0/0:30,0:30:72.67:0,73,440	1/1:5,14:20:27.85:187,28,0	1/1:4,18:22:50.67:371,51,0	1/1:12,10:23:40.49:289,40,0	0/0:28,0:28:66.59:0,67,371	0/0:20,0:20:41.73:0,42,381	0/0:20,0:21:42.71:0,43,408	1/1:8,8:17:19.70:134,20,0	0/0:24,0:24:60.60:0,61,322	1/1:6,10:16:14.84:109,15,0	0/0:18,0:18:49.18:0,49,266	0/0:22,0:21:49.07:0,49,263	0/0:25,0:24:13.40:0,13,437	1/1:6,10:16:17.87:129,18,0	0/0:19,0:19:42.07:0,42,207	0/0:27,0:27:69.49:0,69,399	1/1:9,13:27:42.89:268,43,0	1/1:11,12:24:40.03:288,40,0	0/0:26,0:26:58.46:0,58,357	0/0:22,0:22:55.17:0,55,309	0/0:18,0:18:47.17:0,47,319	1/1:9,22:33:69.49:473,69,0	0/0:31,0:31:69.44:0,69,376	1/1:7,12:19:38.27:272,38,0
chr10	88154558	.	TTCTCTC	T	2547.15	PASS	AC=18;AF=0.346;AN=52;BaseQRankSum=-2.028;DP=663;FS=23.666;HRun=0;HaplotypeScore=175.3946;InbreedingCoeff=0.6773;MQ=72.46;MQ0=22;MQRankSum=1.459;QD=13.48;ReadPosRankSum=-0.005;VQSLOD=1.5848;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:32:2.85:19,3,0	0/0:12,0:12:17.94:0,18,140	./.	0/0:41,0:26:0.89:0,1,2	./.	1/1:22,0:22:18.05:318,18,0	1/1:15,0:14:11.58:240,12,0	0/0:25,0:23:1.14:0,1,4	0/0:30,0:30:30.10:0,30,719	0/0:34,0:34:32.94:0,33,358	0/0:21,0:21:9:0,9,104	1/1:18,0:18:30.10:599,30,0	0/0:24,0:24:6.49:0,6,120	1/1:22,0:22:18.05:333,18,0	0/0:27,0:27:24.55:0,25,565	0/0:27,0:27:3.48:0,3,78	0/0:22,0:20:2.93:0,3,151	1/1:12,0:10:18.06:360,18,0	0/0:15,0:13:3.48:0,3,60	0/0:28,0:28:2:0,2,34	1/1:26,0:26:23.93:367,24,0	0/0:10,12:21:2.36:0,2,5	0/0:21,0:21:0:0,0,0	0/0:29,0:29:6.02:0,6,146	0/0:22,0:22:0.47:0,0,1	1/1:22,0:21:24.07:378,24,0	0/0:27,0:26:35.73:0,36,627	1/1:20,0:18:6.49:104,6,0
chr10	88154572	.	C	CTCTT	6063.30	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=-3.641;DP=670;FS=9.789;HRun=0;HaplotypeScore=165.0764;InbreedingCoeff=-0.2811;MQ=56.35;MQ0=34;MQRankSum=0.369;QD=9.73;ReadPosRankSum=-3.446;VQSLOD=2.9903;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:61.38:421,61,0	0/1:11,0:10:31.36:31,0,37	0/0:19,0:9:17.94:0,18,188	0/0:28,0:13:20.65:0,21,232	1/1:21,0:21:31.83:203,32,0	0/1:29,0:28:99:206,0,129	0/1:17,0:15:33.09:125,0,33	0/1:19,0:17:33.01:275,0,33	1/1:23,0:23:40.96:786,41,0	1/1:29,0:28:0.96:390,1,0	1/1:21,0:20:19.92:210,20,0	0/1:19,0:18:70.87:71,0,165	0/1:23,0:23:12.58:46,0,13	0/1:25,0:25:80.79:187,0,81	1/1:27,0:26:62.88:838,63,0	0/1:31,0:30:33.36:45,0,33	0/1:22,0:19:58.03:222,0,58	0/1:13,0:11:30.53:31,0,144	0/1:17,0:15:33.60:254,0,34	1/1:13,15:29:6.01:180,6,0	0/1:37,0:36:99:210,0,210	0/1:31,0:30:4.52:183,0,5	1/1:22,0:22:24.35:188,24,0	1/1:4,22:28:5.99:102,6,0	1/1:5,17:21:2.23:8,2,0	0/1:25,0:24:99:133,0,249	0/1:28,0:27:46.41:512,0,46	0/1:19,0:16:8.57:205,0,9
chr10	88154574	.	C	CTT	5789.40	PASS	AB=0.934;AC=38;AF=0.679;AN=56;BaseQRankSum=2.557;DP=669;FS=82.185;HRun=1;HaplotypeScore=153.8511;InbreedingCoeff=-0.1199;MQ=55.00;MQ0=34;MQRankSum=1.947;QD=9.26;ReadPosRankSum=4.037;VQSLOD=0.1143;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:47.34:393,47,0	1/1:11,0:10:13.94:75,14,0	0/0:19,0:9:17.94:0,18,188	0/0:25,0:11:20.95:0,21,232	1/1:5,18:23:31.65:203,32,0	0/1:30,0:29:26.32:221,0,26	1/1:17,0:15:24.59:169,25,0	0/1:19,0:17:34:276,0,34	1/1:23,0:23:37.24:635,37,0	1/1:29,0:28:26.88:454,27,0	1/1:20,0:19:30.12:229,30,0	0/1:18,0:17:1.50:107,0,1	0/1:2,20:22:5.60:54,0,6	0/1:24,0:24:9.60:208,0,10	1/1:26,0:25:48.52:640,49,0	0/1:6,25:30:9.43:9,0,45	0/1:22,0:19:19.05:229,0,19	0/1:13,0:11:31.71:48,0,32	0/1:18,0:16:57.74:233,0,58	1/1:30,0:30:6.37:181,6,0	0/1:38,0:37:84.90:229,0,85	0/1:31,0:30:22.89:177,0,23	1/1:15,9:24:24.35:188,24,0	1/1:27,0:27:5.05:43,5,0	1/1:21,0:18:2.36:8,2,0	0/1:25,0:24:99:150,0,173	0/1:29,0:28:93.35:415,0,93	0/1:19,0:16:3.73:212,0,4
chr10	88154604	.	CTGTGTGTG	C	210.38	PASS	AB=0.676;AC=7;AF=0.135;AN=52;BaseQRankSum=5.794;DP=566;FS=5.315;HRun=0;HaplotypeScore=201.7530;InbreedingCoeff=0.5365;MQ=49.06;MQ0=23;MQRankSum=-2.192;QD=2.36;ReadPosRankSum=-3.311;VQSLOD=1.9506;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,15:38:11.97:252,12,0	1/1:12,0:11:0.07:1,0,0	./.	./.	0/0:18,0:18:18.06:0,18,524	0/0:31,0:31:47.18:0,47,1354	0/0:18,0:16:16.82:0,17,463	0/0:20,0:16:27.09:0,27,621	0/0:25,0:25:33.11:0,33,885	0/1:12,0:23:55.62:56,0,62	1/1:7,0:14:2.81:6,3,0	0/0:20,0:18:11.68:0,12,293	0/0:19,0:19:21.07:0,21,622	0/0:24,0:24:22.78:0,23,624	0/0:26,0:25:40.62:0,41,1248	0/0:24,0:22:24.08:0,24,775	0/0:16,0:12:7.46:0,7,30	0/0:17,0:15:34:0,34,871	0/0:12,0:11:21.07:0,21,643	0/0:23,0:23:10.46:0,10,399	0/0:39,0:38:57.11:0,57,1410	0/0:33,0:32:8.67:0,9,395	0/0:21,0:20:18.06:0,18,476	0/0:22,0:22:23.95:0,24,777	0/0:12,0:9:3.01:0,3,100	0/0:22,0:22:33.11:0,33,996	0/0:24,0:24:42.14:0,42,1129	0/0:11,0:10:17.75:0,18,468
chr10	88155366	.	A	ATG	140.90	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-0.067;DP=421;FS=0.000;HRun=0;HaplotypeScore=182.1002;InbreedingCoeff=0.4313;MQ=55.83;MQ0=9;MQRankSum=2.242;QD=3.13;ReadPosRankSum=-3.137;VQSLOD=2.1791;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,19:29:15.16:222,15,0	0/0:7,0:7:3.01:0,3,40	1/1:6,0:5:4.94:22,5,0	0/1:10,0:8:4.94:5,0,7	0/0:18,0:18:11.77:0,12,148	0/0:15,0:15:1.85:0,2,60	0/0:15,0:15:23.77:0,24,229	0/0:19,0:17:47.82:0,48,478	0/0:18,0:18:22.20:0,22,210	0/0:23,0:23:56.60:0,57,579	0/0:14,0:14:2.53:0,3,20	0/0:22,0:22:11.87:0,12,93	0/0:14,0:14:12.46:0,12,126	0/0:8,0:8:8.99:0,9,77	0/0:14,0:14:8.94:0,9,115	0/0:9,0:9:15.04:0,15,172	0/0:10,0:9:6.78:0,7,41	0/0:8,0:7:11.90:0,12,98	0/0:12,0:11:21.04:0,21,232	0/0:21,0:21:12.03:0,12,138	0/0:16,0:14:8.62:0,9,109	0/0:9,0:9:7.73:0,8,65	0/0:13,0:13:15.05:0,15,181	0/0:20,0:20:2.67:0,3,34	0/0:29,0:29:24.07:0,24,285	0/0:27,0:26:57.48:0,57,497	0/0:10,0:10:17.23:0,17,142	0/0:5,0:3:6.02:0,6,71
chr10	88155378	.	G	GCACACA	2791.04	PASS	AB=0.875;AC=28;AF=0.500;AN=56;BaseQRankSum=-4.005;DP=443;FS=9.896;HRun=0;HaplotypeScore=194.8689;InbreedingCoeff=0.6539;MQ=44.22;MQ0=14;MQRankSum=1.933;QD=12.24;ReadPosRankSum=-1.313;VQSLOD=2.0019;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:22.76:0,23,254	0/1:7,1:8:2.66:49,0,3	1/1:5,0:4:2.22:7,2,0	0/0:3,0:1:0:0,0,0	0/0:20,0:20:13.29:0,13,239	1/1:14,1:15:5.79:93,6,0	1/1:14,1:16:6.55:132,7,0	1/1:21,0:16:7.66:123,8,0	0/0:16,0:15:16.42:0,16,162	1/1:11,11:25:23.32:590,23,0	1/1:7,6:14:1.15:16,1,0	1/1:18,2:22:23.83:437,24,0	0/0:12,0:12:12.18:0,12,169	1/1:13,0:13:5.40:173,5,0	0/0:16,0:16:9.02:0,9,174	0/0:11,0:11:15.05:0,15,218	1/1:4,5:13:17.80:445,18,0	1/1:8,0:8:6.78:61,7,0	0/0:9,0:7:17.91:0,18,170	0/0:22,0:22:12.04:0,12,188	1/1:16,0:21:0.62:1,1,0	1/1:11,0:11:5.72:68,6,0	0/0:15,0:15:15.04:0,15,266	0/0:22,0:23:2.88:0,3,32	0/0:29,0:30:23.63:0,24,379	0/1:21,2:24:1.01:720,0,1	0/0:7,0:7:14.87:0,15,172	1/1:6,0:4:4.15:60,4,0
chr10	88155380	.	GCACACACACACACACA	G	4306.23	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=1.152;DP=487;FS=3.045;HRun=0;HaplotypeScore=230.1040;InbreedingCoeff=0.8253;MQ=43.91;MQ0=14;MQRankSum=-3.573;QD=23.28;ReadPosRankSum=3.189;VQSLOD=3.7571;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:28.67:0,29,1600	0/0:10,0:10:6.02:0,6,290	0/0:5,0:5:6.02:0,6,179	0/0:4,0:2:3.01:0,3,133	1/1:6,12:18:12.41:535,12,0	0/0:15,0:15:9.41:0,9,264	0/0:22,0:22:15.51:0,16,385	0/0:24,0:19:30.10:0,30,1099	1/1:5,11:15:14.92:325,15,0	0/0:28,0:28:78.22:0,78,3363	0/0:16,0:15:12.30:0,12,461	0/0:27,0:27:27.02:0,27,1122	1/1:4,11:15:12.04:503,12,0	0/0:17,0:17:12.03:0,12,540	1/1:2,16:18:8.84:401,9,0	1/1:2,10:12:8.99:287,9,0	0/0:19,0:18:23.82:0,24,1233	0/0:10,0:9:15.05:0,15,475	1/1:6,3:7:9.03:249,9,0	1/1:8,14:22:8.97:287,9,0	0/0:24,0:22:9.03:0,9,334	0/0:12,0:12:9.03:0,9,389	1/1:3,12:16:14.99:555,15,0	1/1:5,18:23:3.31:76,3,0	1/1:15,14:29:17.74:688,18,0	0/0:28,0:27:72.16:0,72,2645	1/1:2,4:7:9.03:400,9,0	0/0:6,0:6:15.05:0,15,547
chr10	88155417	.	ATG	A	87.37	PASS	AB=0.873;AC=9;AF=0.161;AN=56;BaseQRankSum=6.248;DP=688;FS=15.212;HRun=0;HaplotypeScore=204.6173;InbreedingCoeff=0.1194;MQ=43.62;MQ0=34;MQRankSum=-2.629;QD=0.58;ReadPosRankSum=0.381;VQSLOD=1.4723;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,1:43:63.38:0,63,1370	0/0:7,0:7:15.03:0,15,304	0/0:30,0:13:24.72:0,25,572	0/0:47,0:19:27.86:0,28,820	0/0:19,0:19:36.07:0,36,649	0/1:12,3:14:12.58:13,0,14	0/1:16,0:17:5.34:25,0,5	0/0:28,0:21:57.20:0,57,1157	0/0:26,0:25:28.20:0,28,597	0/0:34,0:28:84.29:0,84,1658	0/0:18,0:17:35.76:0,36,606	0/1:15,8:25:52.57:67,0,53	0/0:27,0:27:45.11:0,45,881	0/1:14,6:20:8.19:65,0,8	0/0:27,0:27:48.06:0,48,922	0/0:17,0:17:15.05:0,15,287	0/0:33,1:33:75.31:0,75,1500	0/1:15,1:15:21.65:22,0,40	0/0:14,0:11:25.09:0,25,489	0/0:23,0:23:30.09:0,30,587	0/0:57,0:55:99:0,111,2208	1/1:9,5:14:2.85:18,3,0	0/0:19,0:19:27.01:0,27,455	0/0:32,0:32:20.82:0,21,425	0/0:26,0:26:44.99:0,45,835	0/1:30,3:31:0.01:0,0,1326	0/0:10,0:10:21.07:0,21,391	0/1:9,0:7:5.49:5,0,289
chr10	88155419	.	GCACATA	G	602.35	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.787;DP=706;FS=10.652;HRun=0;HaplotypeScore=235.5826;InbreedingCoeff=0.9131;MQ=43.92;MQ0=33;MQRankSum=-6.187;QD=5.79;ReadPosRankSum=-0.864;VQSLOD=0.8111;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:58.36:0,58,2081	0/0:8,0:8:18.06:0,18,566	0/0:33,0:15:17.14:0,17,825	0/0:50,0:20:48.01:0,48,1187	0/0:23,0:23:44.95:0,45,1224	1/1:8,5:13:5.47:35,5,0	1/1:6,10:16:14.91:221,15,0	0/0:31,0:24:63.20:0,63,1810	0/0:26,0:25:32.78:0,33,962	0/0:34,0:28:81.22:0,81,2623	0/0:19,0:18:36.38:0,36,999	1/1:20,6:25:6.65:82,7,0	0/0:28,0:28:45.15:0,45,1313	1/1:8,12:20:14.78:118,15,0	0/0:28,0:28:51.17:0,51,1449	0/0:17,0:17:15.05:0,15,389	0/0:35,0:34:78.27:0,78,2472	1/1:5,10:14:17.86:256,18,0	0/0:16,0:13:22.32:0,22,631	0/0:23,0:23:30.08:0,30,897	0/0:57,0:55:99:0,114,3731	1/1:7,7:14:5.67:59,6,0	0/0:19,0:19:27.09:0,27,643	0/0:32,0:32:21.54:0,22,696	0/0:26,0:26:45.15:0,45,1216	0/0:33,0:31:81:0,81,2269	0/0:13,0:13:33.07:0,33,753	0/0:9,0:7:18.06:0,18,559
chr10	88156162	.	CAG	C	4405.45	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.417;DP=504;FS=8.346;HRun=0;HaplotypeScore=82.3492;InbreedingCoeff=0.9948;MQ=79.75;MQ0=1;MQRankSum=0.342;QD=37.33;ReadPosRankSum=2.376;VQSLOD=6.7897;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,102,1806	0/0:7,0:7:21.04:0,21,346	0/0:9,0:9:18.05:0,18,281	0/0:19,0:19:19.69:0,20,470	0/0:13,0:13:33.11:0,33,594	1/1:0,16:16:45.15:630,45,0	1/1:1,24:25:72.24:1008,72,0	0/0:40,0:40:99:0,108,1852	0/0:16,0:16:45.15:0,45,805	0/0:20,0:20:54.17:0,54,895	0/0:9,0:9:21.05:0,21,347	1/1:0,25:25:63.21:882,63,0	0/0:13,0:13:36.08:0,36,586	1/1:1,18:19:48.16:672,48,0	0/0:18,0:17:42.13:0,42,727	0/0:13,0:13:33.11:0,33,594	0/0:23,0:23:69.19:0,69,1179	1/1:0,17:17:48.16:672,48,0	0/0:22,0:22:57.19:0,57,1001	0/0:10,0:10:27.09:0,27,484	0/0:17,0:17:39.12:0,39,672	1/1:2,14:16:39.13:540,39,0	0/0:11,0:11:27.08:0,27,450	0/0:24,0:24:66.23:0,66,1183	0/0:12,0:12:33.11:0,33,594	0/0:18,0:18:45.15:0,45,783	0/0:23,0:23:57.20:0,57,1026	0/0:10,0:10:27.09:0,27,486
chr10	88156291	.	AT	A	5735.43	PASS	AB=0.917;AC=41;AF=0.732;AN=56;BaseQRankSum=4.759;DP=453;FS=0.000;HRun=11;HaplotypeScore=71.8934;InbreedingCoeff=0.8676;MQ=66.97;MQ0=2;MQRankSum=0.434;QD=16.11;ReadPosRankSum=1.345;VQSLOD=5.6503;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:30:50.87:147,51,0	1/1:0,11:11:29.97:246,30,0	0/0:7,0:4:6.01:0,6,60	0/1:10,1:9:5.89:6,0,98	1/1:4,19:24:58.95:474,59,0	0/0:10,1:11:3.97:0,4,228	0/0:16,0:16:39.10:0,39,416	1/1:9,31:40:86.85:714,87,0	1/1:2,11:13:32.95:271,33,0	1/1:3,8:11:20.19:154,20,0	1/1:2,9:11:20.93:172,21,0	0/0:16,0:16:27.06:0,27,281	1/1:5,12:17:32.92:271,33,0	0/0:12,1:13:18.05:0,18,192	1/1:2,9:11:17.97:148,18,0	1/1:1,5:6:11.98:99,12,0	1/1:4,37:40:95.87:788,96,0	0/0:26,0:26:75.15:0,75,782	1/1:4,13:17:35.94:296,36,0	1/1:3,14:17:32.50:270,32,0	1/1:3,9:12:23.96:197,24,0	0/0:8,0:8:18.05:0,18,192	1/1:3,12:14:32.94:271,33,0	1/1:4,12:16:35.95:295,36,0	1/1:4,7:11:17.96:148,18,0	1/1:4,11:15:26.94:222,27,0	1/1:1,15:16:47.94:394,48,0	1/1:3,7:11:20.02:154,20,0
chr10	88156446	.	GGTGTGTGTGTGTGT	G	1115.98	PASS	AB=0.837;AC=11;AF=0.220;AN=50;BaseQRankSum=5.700;DP=465;FS=10.407;HRun=0;HaplotypeScore=155.2430;InbreedingCoeff=0.4430;MQ=56.15;MQ0=17;MQRankSum=-5.306;QD=10.94;ReadPosRankSum=-1.916;VQSLOD=1.6926;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:17.19:0,17,461	0/0:4,0:3:9.03:0,9,420	./.	0/0:35,0:18:0:0,0,0	0/1:14,0:14:18.87:60,0,19	0/0:13,0:13:9.03:0,9,407	0/0:24,0:26:27.08:0,27,1014	0/0:23,0:22:9.02:0,9,193	./.	0/0:15,0:15:26.30:0,26,907	0/0:12,0:12:9.03:0,9,487	0/0:17,0:16:36.10:0,36,1448	1/1:9,1:12:6.02:215,6,0	0/0:14,0:18:27.09:0,27,1262	1/1:9,5:14:3.01:117,3,0	0/1:10,5:14:15.12:225,0,15	0/0:27,0:32:34.19:0,34,2280	0/0:11,0:11:15.05:0,15,628	0/0:13,0:13:23.30:0,23,386	0/1:11,0:16:53.15:78,0,53	0/0:14,0:14:13.58:0,14,241	0/0:15,0:17:15.05:0,15,601	1/1:15,1:16:6.02:233,6,0	./.	1/1:11,2:15:9.03:331,9,0	0/0:14,0:18:29.10:0,29,500	0/0:10,0:10:5.99:0,6,65	0/0:1,0:2:6.02:0,6,127
chr10	88157567	.	AG	A	608.31	PASS	AB=0.600;AC=15;AF=0.341;AN=44;BaseQRankSum=-0.878;DP=161;FS=24.881;HRun=6;HaplotypeScore=27.3887;InbreedingCoeff=0.6252;MQ=75.09;MQ0=1;MQRankSum=-5.018;QD=10.49;ReadPosRankSum=3.220;VQSLOD=0.1467;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:31.59:0,32,331	0/0:8,0:7:15.04:0,15,182	0/0:8,0:8:11.34:0,11,161	0/0:10,0:8:8.50:0,8,70	./.	0/0:1,0:1:3.01:0,3,39	0/0:8,0:8:15.03:0,15,181	0/0:4,0:3:2.69:0,3,38	1/1:0,6:6:15.03:157,15,0	./.	0/0:5,0:5:6.02:0,6,78	0/0:4,0:3:9.03:0,9,118	1/1:0,9:9:9.02:96,9,0	0/0:8,0:8:11.99:0,12,157	1/1:2,9:11:5.45:149,5,0	1/1:0,5:5:12.03:126,12,0	0/0:5,0:5:12.04:0,12,150	0/0:4,0:4:6:0,6,62	1/1:8,1:9:2.73:50,3,0	./.	0/0:4,0:4:3.01:0,3,39	./.	1/1:3,2:5:6.01:64,6,0	1/1:3,4:7:6.01:63,6,0	./.	0/0:5,0:5:6.02:0,6,79	0/1:2,4:6:1.39:56,0,1	./.
chr10	88158536	.	A	AAAAAGAAC	2985.79	PASS	AB=0.813;AC=8;AF=0.148;AN=54;BaseQRankSum=-7.503;DP=362;FS=15.156;HRun=0;HaplotypeScore=136.2105;InbreedingCoeff=0.4884;MQ=38.24;MQ0=16;MQRankSum=0.129;QD=41.47;ReadPosRankSum=4.670;VQSLOD=2.3114;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:16:19.87:0,20,158	1/1:0,2:4:3.01:125,3,0	0/0:18,0:4:5.98:0,6,49	0/0:21,0:5:4.78:0,5,108	0/0:15,0:15:23.53:0,24,150	0/0:15,0:15:35.69:0,36,280	0/0:11,0:8:13.89:0,14,85	0/0:13,0:9:11.85:0,12,79	0/0:14,0:10:8.89:0,9,59	1/1:2,15:20:48.14:1634,48,0	1/1:0,13:17:21.07:875,21,0	0/0:11,0:9:9.93:0,10,76	0/0:12,0:12:9.21:0,9,55	0/1:11,0:9:2.13:2,0,123	0/0:14,0:12:14.93:0,15,131	0/0:16,0:14:17.90:0,18,156	0/1:8,8:19:40.53:486,0,41	0/0:8,0:6:8.96:0,9,89	0/0:17,0:16:30.95:0,31,282	0/0:8,0:8:15.01:0,15,216	./.	0/0:5,0:4:8.90:0,9,60	0/0:6,0:5:5.91:0,6,38	0/0:5,0:5:4.72:0,5,21	0/0:11,0:7:8.86:0,9,56	0/0:20,0:19:27.03:0,27,174	0/0:26,0:26:28.90:0,29,263	0/0:3,0:2:5.96:0,6,43
chr10	88158550	.	AAC	A	2264.87	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-5.794;DP=352;FS=29.575;HRun=0;HaplotypeScore=92.5474;InbreedingCoeff=0.3020;MQ=46.12;MQ0=14;MQRankSum=-0.891;QD=9.52;ReadPosRankSum=-6.679;VQSLOD=0.4202;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:15:23.78:247,24,0	0/0:6,0:6:7.56:0,8,67	0/0:23,0:7:8.03:0,8,102	0/0:33,0:13:15.29:0,15,179	0/1:12,0:12:6.05:54,0,6	0/1:19,0:19:39.47:100,0,39	0/1:10,0:7:14.72:15,0,29	1/1:19,0:14:33.34:218,33,0	0/1:8,0:4:6.98:15,0,7	0/0:15,0:15:45.13:0,45,611	0/0:14,0:14:21.06:0,21,259	1/1:9,0:7:0.86:67,1,0	0/1:8,0:8:5.98:34,0,6	0/1:10,0:8:3.10:3,0,38	0/1:10,0:8:1.47:1,0,39	0/1:11,0:8:32.13:32,0,39	0/0:13,0:13:15.04:0,15,191	0/0:6,0:4:4.37:0,4,46	1/1:8,11:17:43.62:481,44,0	1/1:6,5:11:21.29:291,21,0	1/1:4,0:4:5.93:40,6,0	0/1:6,0:4:10.15:10,0,18	1/1:5,0:5:3.33:46,3,0	1/1:3,0:3:4.12:18,4,0	1/1:13,0:8:17.85:114,18,0	1/1:26,0:26:53.60:333,54,0	1/1:13,6:19:29.62:327,30,0	0/0:4,0:3:4.03:0,4,17
chr10	88158551	.	AC	A	2670.84	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=-3.774;DP=345;FS=18.695;HRun=1;HaplotypeScore=87.2660;InbreedingCoeff=0.6117;MQ=50.32;MQ0=13;MQRankSum=-3.014;QD=11.18;ReadPosRankSum=-4.637;VQSLOD=-0.3778;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,7:15:30.76:252,31,0	0/0:6,0:6:7.80:0,8,52	0/0:23,0:7:7.95:0,8,97	0/0:34,0:15:4.01:0,4,103	1/1:11,0:11:22.76:123,23,0	1/1:19,0:19:32.65:198,33,0	1/1:10,0:7:7.50:53,7,0	1/1:14,5:14:37.24:243,37,0	1/1:7,0:3:4.69:38,5,0	0/0:15,0:15:45.05:0,45,444	0/0:14,0:14:20.83:0,21,166	1/1:8,0:6:13.36:91,13,0	1/1:7,0:7:3.85:35,4,0	1/1:9,0:8:6.71:41,7,0	0/1:9,0:7:7.34:27,0,7	1/1:10,1:8:10.92:81,11,0	0/0:13,0:13:17.98:0,18,159	1/1:6,0:4:2.44:25,2,0	1/1:17,2:17:44.60:380,45,0	1/1:8,3:11:27.37:226,27,0	1/1:3,1:4:5.93:40,6,0	1/1:6,0:4:5.52:37,6,0	1/1:4,0:4:9.96:51,10,0	1/1:2,1:3:5.80:32,6,0	1/1:11,2:8:21.61:148,22,0	1/1:22,2:24:67.04:445,67,0	1/1:17,2:19:29.85:267,30,0	0/1:4,0:3:5.74:15,0,6
chr10	88158557	.	AC	A	2404.13	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=-2.597;DP=365;FS=13.924;HRun=1;HaplotypeScore=96.4113;InbreedingCoeff=0.3782;MQ=65.70;MQ0=8;MQRankSum=-5.498;QD=8.53;ReadPosRankSum=-3.111;VQSLOD=-0.7179;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,4:13:29.86:246,30,0	0/1:6,0:6:7.46:7,0,77	0/1:29,0:15:19.34:19,0,158	0/0:40,0:19:28.80:0,29,268	1/1:10,0:10:21.02:120,21,0	1/1:20,0:20:32.66:196,33,0	1/1:9,0:7:6.68:53,7,0	1/1:22,2:18:47.95:315,48,0	1/1:7,1:4:6.73:53,7,0	0/0:17,0:17:48.13:0,48,542	0/0:13,0:13:21.06:0,21,228	1/1:8,0:6:12.75:90,13,0	1/1:7,0:7:3.23:36,3,0	1/1:9,0:8:6.77:40,7,0	1/1:9,0:8:8.88:68,9,0	1/1:12,0:9:12.76:105,13,0	0/0:13,0:13:24.01:0,24,269	1/1:6,0:5:5.07:42,5,0	0/1:21,0:19:20.74:129,0,21	0/1:11,0:11:6.63:111,0,7	1/1:4,0:4:5.93:40,6,0	1/1:6,0:4:4.46:35,4,0	1/1:5,0:5:12.95:73,13,0	1/1:3,0:3:6.25:33,6,0	1/1:14,0:9:21.61:148,22,0	1/1:24,0:24:70.64:490,71,0	0/1:20,0:20:11.13:116,0,11	1/1:3,0:2:3.56:13,4,0
chr10	88158561	.	AAC	A	1727.08	PASS	AB=0.989;AC=33;AF=0.589;AN=56;BaseQRankSum=-4.164;DP=371;FS=23.490;HRun=0;HaplotypeScore=107.0103;InbreedingCoeff=0.1744;MQ=65.88;MQ0=8;MQRankSum=-2.174;QD=6.75;ReadPosRankSum=-4.414;VQSLOD=0.7153;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:14,2:15:28.44:273,28,0	0/1:5,0:5:12.32:12,0,86	0/0:28,0:15:28.79:0,29,339	0/0:39,0:19:33.69:0,34,339	1/1:13,0:13:1.10:58,1,0	0/1:20,0:20:30.89:98,0,31	0/1:9,0:7:19.29:19,0,20	1/1:26,0:20:46.56:286,47,0	0/1:8,0:4:2:30,0,2	0/0:19,0:19:51.81:0,52,759	0/0:13,0:13:21.07:0,21,326	1/1:8,0:6:3.68:66,4,0	0/1:7,0:7:6.20:15,0,6	0/1:9,0:8:4.64:5,0,40	0/1:9,0:8:17.15:17,0,33	0/1:13,0:10:27.44:59,0,27	0/0:13,0:13:20.98:0,21,299	0/1:7,0:6:4.54:5,0,40	1/1:20,0:19:15.52:146,16,0	0/1:10,0:10:6.92:63,0,7	1/1:4,1:5:5.91:38,6,0	0/1:6,1:5:10.73:48,0,11	1/1:5,0:5:8.38:72,8,0	1/1:4,0:4:3.28:26,3,0	1/1:14,0:9:18.18:116,18,0	1/1:23,0:23:59.41:360,59,0	1/1:18,0:18:9.73:94,10,0	0/0:3,0:2:4.83:0,5,19
chr10	88158562	.	AC	A	2940.07	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-1.955;DP=368;FS=10.891;HRun=1;HaplotypeScore=98.4039;InbreedingCoeff=0.8107;MQ=66.11;MQ0=8;MQRankSum=-3.694;QD=11.67;ReadPosRankSum=-1.990;VQSLOD=0.5241;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,1:15:32.86:270,33,0	0/0:5,0:5:3.95:0,4,68	0/0:27,0:15:25.91:0,26,221	0/0:37,2:19:22.67:0,23,255	1/1:12,0:12:24.19:144,24,0	1/1:20,0:20:34.18:203,34,0	1/1:9,0:7:10.52:65,11,0	1/1:26,0:20:55.72:368,56,0	1/1:8,0:4:8.84:62,9,0	0/0:19,0:19:49.48:0,49,585	0/0:13,0:13:21.05:0,21,227	1/1:8,0:6:14.40:96,14,0	1/1:7,0:7:2.78:20,3,0	1/1:9,0:8:8.65:44,9,0	1/1:9,0:8:11.17:67,11,0	1/1:13,0:10:19.38:133,19,0	0/0:13,0:13:20.99:0,21,224	1/1:7,0:6:8.51:46,9,0	1/1:19,1:19:47.86:338,48,0	1/1:9,1:10:23.18:194,23,0	1/1:5,0:5:5.91:38,6,0	1/1:7,0:5:9.81:60,10,0	1/1:5,0:5:13.93:81,14,0	1/1:4,0:4:11.69:71,12,0	1/1:14,0:9:22:157,22,0	1/1:23,0:23:67.95:470,68,0	1/1:16,1:17:24.07:183,24,0	1/1:3,0:2:3.56:13,4,0
chr10	88158569	.	A	AG	1440.15	PASS	AB=0.974;AC=27;AF=0.482;AN=56;BaseQRankSum=0.930;DP=371;FS=47.175;HRun=0;HaplotypeScore=113.3977;InbreedingCoeff=0.3026;MQ=70.92;MQ0=4;MQRankSum=-3.623;QD=6.92;ReadPosRankSum=3.801;VQSLOD=1.6744;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:17.92:161,18,0	0/0:3,0:3:6.02:0,6,84	0/0:27,0:17:46.25:0,46,496	0/0:37,0:24:32.93:0,33,432	1/1:12,2:14:6.80:145,7,0	0/1:20,0:20:52.46:103,0,52	1/1:8,0:6:14.19:107,14,0	0/1:27,0:21:48.78:165,0,49	1/1:5,0:4:5.93:49,6,0	0/0:19,0:19:57.16:0,57,742	0/0:13,0:13:24.07:0,24,317	0/1:8,0:7:5.39:65,0,5	1/1:0,5:5:2.84:14,3,0	0/1:10,1:10:41.29:41,0,43	0/1:10,0:9:34.32:34,0,54	0/1:13,1:11:0.17:106,0,0	0/0:12,0:12:24.02:0,24,293	0/1:7,0:6:6.39:6,0,55	0/0:19,0:18:29.61:0,30,243	0/0:10,0:10:5.42:0,5,98	1/1:8,0:8:8.82:58,9,0	1/1:7,0:5:14.31:103,14,0	1/1:3,2:5:14.94:143,15,0	1/1:5,0:6:3.38:32,3,0	0/1:14,0:10:4.01:50,0,4	0/1:21,2:23:26.35:242,0,26	0/0:21,0:21:14.50:0,14,82	0/0:2,0:2:5.57:0,6,30
chr10	88158572	.	A	AC	774.58	PASS	AB=1.000;AC=10;AF=0.185;AN=54;BaseQRankSum=-4.142;DP=332;FS=10.102;HRun=2;HaplotypeScore=111.9000;InbreedingCoeff=0.3755;MQ=74.80;MQ0=3;MQRankSum=-1.376;QD=8.07;ReadPosRankSum=-0.877;VQSLOD=-0.0712;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:35.10:0,35,239	0/0:3,0:3:3.06:0,3,9	0/0:23,0:17:38.49:0,38,344	0/0:35,0:23:39.91:0,40,341	0/0:13,0:13:18.96:0,19,192	0/0:12,0:12:18.80:0,19,108	0/0:7,0:6:11.34:0,11,84	0/0:27,0:21:41.75:0,42,297	0/0:3,0:3:5.60:0,6,40	0/1:19,0:19:24.79:25,0,53	0/1:13,0:13:3.24:3,0,48	0/1:5,0:4:12.50:12,0,42	0/0:5,0:5:2.98:0,3,21	0/0:7,0:6:11.68:0,12,71	0/0:5,0:5:10.52:0,11,82	0/0:14,0:11:15.08:0,15,119	0/1:12,0:12:10.04:10,0,24	0/0:3,0:3:2.98:0,3,22	1/1:5,12:18:39.53:409,40,0	1/1:3,5:9:16.52:237,17,0	0/0:10,0:9:11.88:0,12,84	0/0:6,0:5:14.35:0,14,84	0/0:5,0:5:3.34:0,3,46	0/0:7,0:7:5.94:0,6,42	0/0:12,0:10:17.33:0,17,113	0/0:21,0:21:47.23:0,47,345	1/1:3,16:19:10.45:226,10,0	./.
chr10	88158617	.	T	TACC	2859.55	PASS	AB=0.667;AC=17;AF=0.315;AN=54;BaseQRankSum=-0.962;DP=311;FS=6.850;HRun=0;HaplotypeScore=81.3139;InbreedingCoeff=0.7551;MQ=68.98;MQ0=16;MQRankSum=-3.388;QD=35.74;ReadPosRankSum=-0.994;VQSLOD=3.9272;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:11:5.57:0,6,96	0/0:5,0:5:9.03:0,9,145	0/0:35,0:12:26.85:0,27,459	0/0:52,0:23:44.97:0,45,744	0/0:17,0:17:20.33:0,20,335	1/1:1,4:5:9.03:175,9,0	1/1:1,7:8:3.01:57,3,0	1/1:4,9:12:27.09:572,27,0	0/0:6,0:6:15.05:0,15,239	0/0:8,0:8:24.08:0,24,366	0/0:9,0:8:9.85:0,10,142	1/1:0,7:7:15.05:295,15,0	0/0:5,0:5:15.05:0,15,238	1/1:1,2:4:5.98:82,6,0	0/0:4,0:4:12.04:0,12,192	0/0:8,0:8:18.06:0,18,286	0/0:12,0:12:21.07:0,21,331	1/1:2,6:8:17.71:392,18,0	0/0:17,0:16:33.10:0,33,503	0/0:2,0:2:6.02:0,6,96	1/1:15,1:14:24.08:527,24,0	1/1:3,0:3:3.48:67,3,0	0/0:8,0:8:12.04:0,12,184	0/0:8,0:8:11.86:0,12,192	0/0:5,0:5:6.02:0,6,96	0/1:8,8:16:3.07:875,0,3	0/0:17,0:15:8.60:0,9,267	./.
chr10	88158621	.	A	AC	1019.72	PASS	AB=1.000;AC=17;AF=0.315;AN=54;BaseQRankSum=5.617;DP=326;FS=1.699;HRun=2;HaplotypeScore=78.6442;InbreedingCoeff=0.7056;MQ=64.17;MQ0=20;MQRankSum=-3.624;QD=12.29;ReadPosRankSum=0.443;VQSLOD=2.2760;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:11:5.57:0,6,77	0/0:5,0:5:9.03:0,9,117	0/0:34,0:11:26.85:0,27,363	0/0:49,0:20:48.61:0,49,600	0/0:17,0:17:20.64:0,21,267	1/1:6,0:5:9.03:109,9,0	1/1:7,0:7:3.01:36,3,0	0/1:14,0:11:69.73:135,0,70	0/0:8,0:8:15.05:0,15,190	0/0:9,0:8:24.07:0,24,300	0/0:11,0:10:4.71:0,5,101	1/1:7,0:7:15.04:173,15,0	0/0:5,0:5:15.05:0,15,189	1/1:4,0:4:5.98:54,6,0	0/0:5,0:5:12.04:0,12,153	0/0:8,0:8:21.95:0,22,260	0/0:15,0:15:21.07:0,21,264	1/1:8,0:8:17.77:170,18,0	0/0:17,0:16:36.08:0,36,435	0/0:3,0:3:6.02:0,6,78	1/1:4,13:15:23.78:191,24,0	1/1:0,2:2:3.40:18,3,0	0/0:9,0:9:11.86:0,12,151	0/0:9,0:9:11.71:0,12,155	0/0:6,0:6:6.02:0,6,78	1/1:11,6:17:7.91:314,8,0	0/0:19,0:17:13.49:0,13,214	./.
chr10	88158624	.	CTGTGTG	C	1179.91	PASS	AC=28;AF=0.583;AN=48;BaseQRankSum=2.278;DP=340;FS=0.000;HRun=0;HaplotypeScore=93.6629;InbreedingCoeff=0.5544;MQ=61.70;MQ0=21;MQRankSum=-4.841;QD=8.55;ReadPosRankSum=1.546;VQSLOD=1.7010;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:11:5.87:0,6,134	./.	0/0:33,0:10:3.01:0,3,39	0/0:49,0:20:3.95:0,4,40	1/1:6,9:17:2.91:42,3,0	1/1:3,0:4:9.03:164,9,0	1/1:6,0:7:3.01:53,3,0	1/1:13,0:10:2.14:7,2,0	1/1:5,6:10:9.03:158,9,0	0/0:12,0:11:12.44:0,12,234	0/0:14,0:14:8.96:0,9,181	1/1:3,0:7:12.04:216,12,0	1/1:3,2:6:6.02:103,6,0	1/1:2,0:3:3.01:52,3,0	1/1:3,2:5:3.01:62,3,0	1/1:4,4:8:15.05:280,15,0	0/0:16,0:16:18.02:0,18,407	1/1:9,0:9:5.02:100,5,0	0/0:15,0:14:12.04:0,12,338	0/0:5,0:3:3.01:0,3,66	1/1:20,0:18:0.17:1,0,0	0/0:2,0:2:0.47:0,0,1	1/1:4,4:9:3.01:42,3,0	./.	./.	1/1:16,0:17:2.74:54,3,0	0/0:18,0:17:8.46:0,8,182	./.
chr10	88159008	.	C	CT	8377.54	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=0.117;DP=507;FS=0.000;HRun=10;HaplotypeScore=77.5184;InbreedingCoeff=0.7091;MQ=76.64;MQ0=0;MQRankSum=-1.682;QD=17.82;ReadPosRankSum=0.789;VQSLOD=5.3799;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:80.76:0,81,655	1/1:0,5:5:15.04:160,15,0	0/1:14,0:14:5.75:6,0,144	0/0:7,0:8:13.86:0,14,94	1/1:2,1:27:66.33:352,66,0	1/1:0,14:14:36.09:384,36,0	1/1:6,11:18:8.27:278,8,0	1/1:9,25:34:53.72:758,54,0	1/1:2,0:16:37:186,37,0	1/1:6,26:32:84.20:886,84,0	1/1:3,21:23:57.06:583,57,0	1/1:1,14:15:27.07:288,27,0	1/1:5,1:18:10.03:156,10,0	1/1:1,14:15:36.09:384,36,0	1/1:5,0:30:59.73:298,60,0	1/1:1,0:12:25.57:128,26,0	1/1:4,15:19:22.77:426,23,0	1/1:1,9:10:2.42:231,2,0	1/1:7,3:21:40.31:253,40,0	1/1:3,0:22:46.25:242,46,0	1/1:0,10:10:27.07:288,27,0	1/1:1,15:16:42.07:436,42,0	1/1:4,0:15:25.67:129,26,0	1/1:0,0:6:11.36:57,11,0	1/1:0,1:19:45.69:246,46,0	1/1:4,19:23:57.10:589,57,0	1/1:0,0:16:31.35:157,31,0	1/1:4,14:18:45.11:479,45,0
chr10	88159396	.	C	CG	5873	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-14.114;DP=695;FS=0.688;HRun=5;HaplotypeScore=66.1230;InbreedingCoeff=0.9720;MQ=82.30;MQ0=0;MQRankSum=-4.283;QD=32.63;ReadPosRankSum=-0.719;VQSLOD=5.0521;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,123,1301	0/0:8,0:8:21.05:0,21,226	0/0:26,0:27:60.86:0,61,637	0/0:12,0:12:27.02:0,27,269	0/0:35,0:35:96.18:0,96,1011	0/0:15,0:15:45.11:0,45,483	0/0:25,0:25:63.16:0,63,676	1/1:1,18:19:51.13:625,51,0	0/0:30,0:30:84.21:0,84,903	0/0:47,0:47:99:0,132,1419	0/0:27,0:27:81.16:0,81,858	0/0:31,0:31:84.21:0,84,903	0/0:26,0:26:75.19:0,75,805	0/0:16,0:16:42.07:0,42,440	0/0:20,0:20:60.15:0,60,644	0/0:19,0:19:57.14:0,57,612	0/0:22,0:22:66.17:0,66,709	0/0:15,0:15:39.06:0,39,407	1/1:4,15:19:45.06:527,45,0	1/1:3,31:34:90.27:1165,90,0	1/1:2,30:32:84.27:1105,84,0	0/0:26,0:26:75.19:0,75,806	0/0:21,0:21:57.14:0,57,612	0/0:31,0:31:87.20:0,87,926	0/0:17,0:17:42.09:0,42,444	1/1:5,36:41:4.10:1267,4,0	1/1:2,20:22:57.19:750,57,0	1/1:2,11:13:33.11:434,33,0
chr10	88159659	.	GAA	G	6193.29	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=16.392;DP=636;FS=2.108;HRun=2;HaplotypeScore=86.8161;InbreedingCoeff=0.9999;MQ=93.23;MQ0=0;MQRankSum=-7.445;QD=44.56;ReadPosRankSum=2.022;VQSLOD=4.8507;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,2260	0/0:11,0:11:33.10:0,33,634	0/0:29,0:29:78.27:0,78,1506	0/0:27,0:27:69.55:0,70,1367	0/0:25,0:25:75.26:0,75,1503	1/1:0,17:17:45.15:732,45,0	1/1:0,28:28:72.25:1173,72,0	0/0:32,0:32:93.32:0,93,1865	0/0:23,0:23:69.24:0,69,1388	0/0:14,0:14:42.14:0,42,848	0/0:15,0:15:45.15:0,45,905	1/1:0,21:21:63.22:1027,63,0	0/0:23,0:23:69.24:0,69,1373	1/1:0,22:22:66.23:1076,66,0	0/0:25,0:25:75.24:0,75,1461	0/0:25,0:25:75.26:0,75,1514	0/0:28,0:28:84.26:0,84,1631	1/1:0,23:23:57.19:920,57,0	0/0:20,0:20:60.21:0,60,1199	0/0:19,0:19:57.20:0,57,1150	0/0:21,0:21:63.22:0,63,1253	1/1:0,28:28:78.26:1266,78,0	0/0:15,0:15:45.15:0,45,892	0/0:36,0:36:99:0,108,2195	0/0:14,0:14:42.14:0,42,842	0/0:24,0:24:72.25:0,72,1449	0/0:22,0:22:66.23:0,66,1325	0/0:11,0:11:33.11:0,33,670
chr10	88160258	.	TGA	T	3110.82	PASS	AB=0.943;AC=27;AF=0.482;AN=56;BaseQRankSum=-0.637;DP=643;FS=4.523;HRun=0;HaplotypeScore=141.7884;InbreedingCoeff=0.7499;MQ=57.89;MQ0=7;MQRankSum=2.562;QD=9.20;ReadPosRankSum=4.872;VQSLOD=3.3633;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,1:40:27.97:0,28,599	1/1:3,0:13:22.84:117,23,0	0/1:26,0:12:0:0,0,0	0/0:41,0:15:3.01:0,3,34	1/1:7,11:19:27.02:309,27,0	0/0:16,0:16:5:0,5,248	0/0:24,1:25:22.79:0,23,492	0/0:34,0:34:46.64:0,47,543	1/1:6,10:18:9.28:279,9,0	1/1:17,0:20:8.95:66,9,0	1/1:8,0:18:20.03:104,20,0	0/0:20,2:22:12.14:0,12,353	1/1:13,10:23:36.57:412,37,0	0/0:21,1:22:7.76:0,8,373	1/1:13,8:21:37.49:393,37,0	1/1:11,13:25:47.94:509,48,0	1/1:16,0:25:22.96:122,23,0	0/1:27,2:29:4.26:4,0,520	0/0:19,0:18:20.98:0,21,217	0/1:15,2:17:7.30:7,0,220	0/0:17,0:16:2.99:0,3,30	0/0:23,0:23:18.40:0,18,338	1/1:10,13:23:7.68:286,8,0	1/1:14,25:42:44.63:472,45,0	1/1:6,11:17:20.96:237,21,0	0/0:26,0:25:50.17:0,50,513	0/0:14,0:14:33.07:0,33,377	0/0:6,0:6:11.91:0,12,106
chr10	88160277	.	G	GAC	632.21	PASS	AB=0.966;AC=9;AF=0.161;AN=56;BaseQRankSum=1.407;DP=634;FS=4.128;HRun=0;HaplotypeScore=168.0674;InbreedingCoeff=0.2192;MQ=54.54;MQ0=11;MQRankSum=0.738;QD=4.61;ReadPosRankSum=-0.816;VQSLOD=3.0066;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:74.65:0,75,1022	1/1:10,1:11:10.45:93,10,0	0/0:17,0:5:2.31:0,2,29	0/0:37,0:10:2.23:0,2,87	0/0:19,0:19:34.95:0,35,257	0/1:19,0:18:22.79:23,0,93	0/0:25,0:25:23.63:0,24,173	0/0:34,0:34:93.61:0,94,944	0/0:23,0:23:45.37:0,45,366	0/1:21,2:22:96.76:235,0,97	1/1:16,1:17:8.38:154,8,0	0/1:24,0:24:71.04:71,0,114	0/0:21,0:21:47.77:0,48,309	0/1:23,0:23:27.02:27,0,136	0/0:22,0:21:53.49:0,53,413	0/0:26,0:26:17.16:0,17,310	0/1:18,2:20:69.74:173,0,70	0/0:29,0:29:15.82:0,16,247	0/0:24,0:22:42.32:0,42,575	0/0:14,0:14:38.98:0,39,458	0/0:15,0:13:12.77:0,13,101	0/0:25,0:25:10.49:0,10,143	0/0:19,0:19:24.01:0,24,274	0/0:41,0:41:25.56:0,26,300	0/0:19,0:18:35.26:0,35,251	0/0:28,0:27:18.02:0,18,498	0/0:15,0:15:41.99:0,42,575	0/0:6,0:6:4.55:0,5,86
chr10	88160287	.	GAC	G	618.83	PASS	AB=0.978;AC=14;AF=0.250;AN=56;BaseQRankSum=2.974;DP=614;FS=2.900;HRun=0;HaplotypeScore=171.3363;InbreedingCoeff=0.1613;MQ=61.20;MQ0=10;MQRankSum=1.434;QD=2.51;ReadPosRankSum=1.767;VQSLOD=2.9043;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:33.99:0,34,1067	0/0:12,0:12:18.49:0,18,82	0/0:26,0:16:18.92:0,19,223	0/1:39,0:14:12.09:12,0,50	1/1:15,0:15:1.51:61,2,0	0/0:20,0:19:10.05:0,10,501	0/0:23,0:23:52.28:0,52,987	0/0:36,0:36:85.26:0,85,867	0/1:26,0:26:51.76:52,0,183	0/0:16,0:15:0.09:0,0,148	0/0:13,0:13:10.49:0,10,38	0/0:24,0:24:47.96:0,48,769	1/1:20,0:20:11.20:116,11,0	0/0:23,0:23:49.33:0,49,823	0/1:16,1:16:20.78:129,0,21	1/1:22,0:22:6.20:106,6,0	0/0:17,0:17:39.71:0,40,212	0/0:32,0:32:34.08:0,34,1081	0/0:22,0:20:54.22:0,54,613	0/0:11,0:11:23.17:0,23,419	0/1:16,0:14:1.18:1,0,147	0/0:22,0:22:42.05:0,42,571	0/1:19,0:19:57.76:74,0,58	0/1:37,1:38:30.82:112,0,31	0/1:18,2:19:64.49:105,0,64	0/0:25,0:24:47.90:0,48,716	0/1:15,0:15:0.32:0,0,541	0/0:10,0:10:23.59:0,24,234
chr10	88160362	.	AGAAT	A	296.38	PASS	AB=0.923;AC=11;AF=0.196;AN=56;BaseQRankSum=6.125;DP=635;FS=3.054;HRun=0;HaplotypeScore=140.7468;InbreedingCoeff=0.8539;MQ=63.36;MQ0=8;MQRankSum=-0.781;QD=2.43;ReadPosRankSum=2.265;VQSLOD=2.7489;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:69.23:0,69,1364	0/0:7,0:7:15.05:0,15,323	0/0:21,0:15:29.79:0,30,644	0/0:30,0:19:38.69:0,39,607	0/0:23,0:22:42.14:0,42,704	1/1:23,1:24:13.32:147,13,0	1/1:20,0:20:6.22:17,6,0	0/0:38,0:38:96.30:0,96,1535	0/0:29,0:29:59.94:0,60,1003	0/0:24,0:23:56.93:0,57,1066	0/0:18,0:18:47.76:0,48,720	1/1:18,2:20:12.24:129,12,0	0/0:18,0:18:33.09:0,33,570	1/1:26,0:26:3.09:9,3,0	0/0:17,0:17:29.75:0,30,447	0/0:27,0:27:60.20:0,60,1009	0/0:21,0:21:43.08:0,43,789	1/1:19,1:20:15.25:144,15,0	0/0:24,0:23:36.12:0,36,601	0/0:18,0:17:33.10:0,33,567	0/0:29,0:29:52.01:0,52,835	0/1:11,1:11:0.01:0,0,1	0/0:5,0:5:5.61:0,6,101	0/0:28,0:28:63.18:0,63,979	0/0:26,0:26:59.87:0,60,973	0/0:27,0:27:63.70:0,64,1274	0/0:19,0:18:36.45:0,36,548	0/0:14,0:12:21.07:0,21,370
chr10	88160364	.	AAT	A	866.12	PASS	AB=0.814;AC=13;AF=0.232;AN=56;BaseQRankSum=5.404;DP=564;FS=10.038;HRun=0;HaplotypeScore=106.1510;InbreedingCoeff=0.4351;MQ=68.54;MQ0=8;MQRankSum=-0.567;QD=5.12;ReadPosRankSum=-2.120;VQSLOD=1.9904;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:69.22:0,69,1081	0/0:6,0:6:15:0,15,256	0/0:21,0:16:32.80:0,33,691	0/0:33,0:22:44.66:0,45,679	0/0:20,0:19:11.69:0,12,652	0/1:4,17:21:14.40:158,0,14	0/1:1,14:15:17.27:175,0,17	0/0:38,0:38:99:0,105,1674	0/1:25,0:25:2.33:2,0,801	0/0:22,0:22:48.69:0,49,950	0/0:17,0:17:46.77:0,47,653	1/1:2,18:20:18.02:242,18,0	0/0:14,0:14:39.11:0,39,586	1/1:2,21:23:6.02:98,6,0	0/0:14,0:14:27.23:0,27,413	0/0:24,0:24:60.09:0,60,842	0/1:16,0:16:33.55:34,0,573	1/1:3,16:19:20.98:276,21,0	0/1:19,0:18:3.71:4,0,615	0/0:14,0:14:12.17:0,12,533	0/0:24,1:25:32.25:0,32,811	1/1:4,7:10:2.55:36,3,0	0/0:3,0:3:5.61:0,6,101	0/0:28,0:28:61.45:0,61,905	0/0:23,0:23:8.27:0,8,840	0/0:26,0:26:69.01:0,69,1183	0/0:15,0:14:10.25:0,10,464	0/0:9,0:7:21.07:0,21,360
chr10	88160542	.	TACACACACACACACAC	T	461.70	PASS	AC=14;AF=0.292;AN=48;BaseQRankSum=2.060;DP=494;FS=9.589;HRun=0;HaplotypeScore=216.5538;InbreedingCoeff=0.5999;MQ=63.48;MQ0=20;MQRankSum=-0.650;QD=3.58;ReadPosRankSum=1.277;VQSLOD=1.8284;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:18.03:0,18,812	1/1:9,0:10:3.01:112,3,0	./.	./.	0/0:13,0:13:18.06:0,18,1122	0/0:17,0:16:5.61:0,6,47	1/1:30,0:30:2.67:24,3,0	0/0:12,0:12:6.58:0,7,29	0/0:15,0:17:9.03:0,9,495	1/1:9,0:9:0.47:1,0,0	1/1:11,0:11:2.98:22,3,0	./.	0/0:13,0:13:21.54:0,22,1329	1/1:14,5:19:9.03:389,9,0	0/0:16,0:15:9.03:0,9,470	0/0:13,0:13:6.49:0,6,387	0/0:21,0:20:12.21:0,12,74	1/1:30,0:30:2.07:40,2,0	0/0:14,0:14:3.95:0,4,145	0/0:11,0:12:15.05:0,15,732	0/0:31,0:29:27.09:0,27,1626	./.	0/0:9,0:9:11.78:0,12,518	0/0:32,0:32:33.52:0,34,1535	1/1:20,0:19:0.46:1,0,0	0/0:17,0:17:21.52:0,22,924	0/0:12,0:12:30.10:0,30,1437	0/0:6,0:6:7.58:0,8,437
chr10	88161114	.	AT	A	6686.96	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.497;DP=696;FS=16.143;HRun=1;HaplotypeScore=98.2667;InbreedingCoeff=0.9820;MQ=88.14;MQ0=0;MQRankSum=-3.412;QD=39.80;ReadPosRankSum=-0.951;VQSLOD=2.8514;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:99:0,132,1998	1/1:0,8:8:24.08:336,24,0	0/0:25,0:25:65.37:0,65,1048	0/0:24,0:24:66.12:0,66,939	0/0:20,0:20:57.19:0,57,908	0/0:22,0:22:66.23:0,66,1054	0/0:34,0:33:99:0,102,1625	1/1:0,27:27:81.24:1110,81,0	0/0:31,0:31:93.32:0,93,1483	1/1:3,27:30:87.29:1216,87,0	1/1:0,16:16:48.12:638,48,0	0/0:29,0:29:87.28:0,87,1367	0/0:39,0:39:99:0,117,1845	0/0:26,0:26:78.25:0,78,1221	0/0:20,0:20:60.20:0,60,959	0/0:31,0:31:93.32:0,93,1478	1/1:0,26:26:72.24:1007,72,0	0/0:30,0:30:90.31:0,90,1438	0/0:15,0:15:45.15:0,45,700	0/0:15,0:15:42.13:0,42,646	1/1:0,33:33:90.21:1210,90,0	0/0:19,0:19:57.17:0,57,865	0/0:12,0:12:36.12:0,36,575	0/0:41,1:42:84.47:0,84,1901	0/0:24,0:24:69.24:0,69,1102	1/1:0,26:26:78.26:1086,78,0	0/0:26,0:25:78.27:0,78,1246	1/1:0,2:2:6.02:84,6,0
chr10	88161231	.	T	TC	15756.18	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-6.219;DP=706;FS=7.452;HRun=2;HaplotypeScore=107.0771;InbreedingCoeff=0.9988;MQ=81.36;MQ0=0;MQRankSum=-2.883;QD=39.39;ReadPosRankSum=1.215;VQSLOD=4.3446;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,117,1438	1/1:0,12:12:33.11:475,33,0	0/0:15,0:15:45.11:0,45,512	0/0:25,0:25:62.23:0,62,765	0/0:21,0:21:63.17:0,63,764	1/1:1,14:15:39.13:562,39,0	1/1:2,22:24:63.21:907,63,0	1/1:2,26:28:75.25:1080,75,0	0/0:33,0:33:87.27:0,87,1079	1/1:0,27:27:78.26:1123,78,0	1/1:0,17:17:51.17:734,51,0	1/1:1,30:31:81.27:1166,81,0	0/0:24,0:24:69.22:0,69,855	1/1:0,20:20:60.20:864,60,0	0/0:33,0:33:93.29:0,93,1153	0/0:28,0:28:78.23:0,78,955	1/1:0,36:36:99:1490,105,0	1/1:1,42:43:99:1662,117,0	1/1:2,23:25:69.23:990,69,0	1/1:0,15:14:39.13:557,39,0	1/1:2,40:42:99:1555,108,0	1/1:0,13:13:39.13:561,39,0	0/0:15,0:15:45.14:0,45,558	0/0:46,0:46:99:0,126,1562	0/0:23,0:23:69.22:0,69,855	1/1:1,24:25:72.24:1037,72,0	1/1:1,20:20:51.17:734,51,0	1/1:0,6:6:18.06:259,18,0
chr10	88161710	.	GGTTT	G	12205.69	PASS	AB=0.545;AC=25;AF=0.446;AN=56;BaseQRankSum=15.477;DP=583;FS=1.851;HRun=0;HaplotypeScore=104.7510;InbreedingCoeff=0.9273;MQ=73.14;MQ0=0;MQRankSum=-6.236;QD=42.38;ReadPosRankSum=2.546;VQSLOD=5.5121;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,3046	0/0:10,0:10:30.10:0,30,795	0/0:14,0:14:27.22:0,27,807	0/0:14,0:14:39.11:0,39,890	0/0:21,0:21:57.20:0,57,1520	1/1:4,17:21:48.16:896,48,0	1/1:4,22:26:51.17:951,51,0	1/1:7,26:33:75.24:1360,75,0	0/0:28,0:28:81.28:0,81,2153	0/0:23,0:23:63.22:0,63,1634	0/0:13,0:13:39.13:0,39,1035	1/1:4,23:27:57.20:1063,57,0	0/0:12,0:12:36.12:0,36,960	1/1:0,19:19:36.12:672,36,0	0/0:20,0:20:51.18:0,51,1322	0/0:19,0:19:54.19:0,54,1407	0/0:35,0:35:96.33:0,96,2560	1/1:1,18:19:48.16:896,48,0	1/1:0,23:23:69.24:1257,69,0	1/1:3,15:18:42.10:748,42,0	1/1:1,33:34:75.26:1394,75,0	1/1:1,20:21:51.17:951,51,0	0/0:10,0:10:30.06:0,30,740	0/0:24,0:24:72.25:0,72,1892	0/0:12,0:12:33.11:0,33,880	0/1:3,15:18:99:787,0,102	1/1:0,15:15:36.12:672,36,0	1/1:4,10:14:30.10:560,30,0
chr10	88162098	.	TC	T	3457.95	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.737;DP=511;FS=0.417;HRun=3;HaplotypeScore=53.8237;InbreedingCoeff=0.9994;MQ=86.88;MQ0=0;MQRankSum=-0.544;QD=32.02;ReadPosRankSum=1.181;VQSLOD=3.6942;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.31:0,93,1338	0/0:12,0:12:36.12:0,36,518	0/0:27,0:27:62.84:0,63,793	0/0:15,0:14:39.09:0,39,523	0/0:22,0:22:66.22:0,66,931	1/1:0,20:20:51.16:632,51,0	1/1:0,19:19:54.17:670,54,0	0/0:29,0:29:78.10:0,78,1071	0/0:9,0:9:27.09:0,27,381	0/0:19,0:19:51.17:0,51,734	0/0:17,0:17:51.17:0,51,727	1/1:1,15:16:36.11:446,36,0	0/0:12,0:12:33.11:0,33,473	1/1:0,20:20:54.64:669,55,0	0/0:14,0:14:42.14:0,42,605	0/0:17,0:17:51.17:0,51,735	0/0:16,0:16:45.15:0,45,648	1/1:0,15:15:45.14:558,45,0	0/0:17,0:17:45.15:0,45,648	0/0:19,0:19:54.18:0,54,777	0/0:19,0:19:54.15:0,54,739	1/1:0,18:18:39.12:483,39,0	0/0:10,0:10:27.09:0,27,386	0/0:27,0:27:81.27:0,81,1164	0/0:14,0:14:42.14:0,42,605	0/0:20,0:20:57.19:0,57,820	0/0:21,0:21:63.20:0,63,887	0/0:14,0:14:42.14:0,42,603
chr10	88162267	.	ATGTGTGTGTGTGTGTGTGTGTGTGTGTG	A	9164.49	PASS	AB=0.624;AC=14;AF=0.259;AN=54;BaseQRankSum=10.369;DP=700;FS=4.775;HRun=0;HaplotypeScore=411.2844;InbreedingCoeff=0.7861;MQ=52.97;MQ0=17;MQRankSum=-6.712;QD=44.70;ReadPosRankSum=5.877;VQSLOD=1.9999;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:39:73.08:0,73,6749	0/0:7,0:7:9.03:0,9,402	0/0:28,0:16:15.05:0,15,418	0/0:18,0:10:18.06:0,18,746	0/0:13,0:18:24.40:0,24,1869	1/1:9,16:25:18.06:1310,18,0	./.	0/0:35,0:34:54.16:0,54,2449	0/0:14,0:20:33.11:0,33,2630	0/0:20,0:24:57.20:0,57,3078	0/0:19,0:32:26.92:0,27,1526	1/1:5,19:24:17.24:1309,17,0	0/0:18,0:16:36.58:0,37,2689	1/1:12,19:31:27.09:1966,27,0	0/0:17,0:26:42.14:0,42,3735	0/0:20,0:29:50.59:0,51,4115	0/0:21,0:34:44.17:0,44,2389	0/1:10,11:21:11.79:428,0,12	1/1:15,13:27:35.99:628,36,0	1/1:9,17:26:15.05:929,15,0	0/0:43,0:46:97.22:0,97,8107	1/1:9,15:23:12.04:874,12,0	0/0:10,0:19:30.10:0,30,2760	0/0:14,0:22:33.11:0,33,3039	0/0:16,0:19:39.12:0,39,3254	0/0:18,0:25:69.24:0,69,5540	0/1:8,18:26:63.87:1721,0,64	0/0:13,0:13:30.10:0,30,2716
chr10	88163017	.	AC	A	4708.93	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=10.406;DP=524;FS=5.854;HRun=4;HaplotypeScore=55.7650;InbreedingCoeff=0.9958;MQ=63.00;MQ0=5;MQRankSum=-1.454;QD=28.89;ReadPosRankSum=2.136;VQSLOD=4.7215;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:83.81:0,84,1134	0/0:8,0:8:24.08:0,24,336	0/0:7,0:5:14.83:0,15,139	0/0:14,0:12:30.10:0,30,401	0/0:16,0:16:45.12:0,45,594	1/1:1,10:11:27.08:324,27,0	1/1:0,29:29:75.23:896,75,0	0/0:34,0:33:93.27:0,93,1259	0/0:21,0:21:63.20:0,63,867	0/0:26,0:26:75.24:0,75,1034	0/0:14,0:14:42.11:0,42,546	1/1:0,16:16:45.14:539,45,0	0/0:9,0:9:27.01:0,27,336	1/1:0,17:17:42.13:504,42,0	0/0:9,0:9:24.06:0,24,303	0/0:16,0:16:45.13:0,45,610	0/0:37,0:37:99:0,102,1424	1/1:2,19:21:23.14:482,23,0	1/1:4,19:21:43.96:633,44,0	1/1:0,15:15:39.12:467,39,0	0/0:30,0:29:87.26:0,87,1181	1/1:0,13:13:33.10:396,33,0	0/0:22,0:22:63.21:0,63,879	0/0:11,0:11:30.07:0,30,399	0/0:19,0:19:54.16:0,54,723	0/0:27,0:27:78.24:0,78,1057	1/1:0,18:18:39.12:468,39,0	0/0:11,0:11:33.11:0,33,461
chr10	88163362	.	AGAC	A	2308.12	PASS	AB=0.960;AC=14;AF=0.250;AN=56;BaseQRankSum=-3.287;DP=576;FS=9.461;HRun=0;HaplotypeScore=157.9377;InbreedingCoeff=0.6497;MQ=63.71;MQ0=1;MQRankSum=4.393;QD=12.54;ReadPosRankSum=0.430;VQSLOD=2.8487;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:50.53:0,51,954	0/0:6,0:6:12.72:0,13,245	0/0:15,0:12:27.53:0,28,494	0/0:24,0:23:46.11:0,46,827	0/0:21,0:21:27.09:0,27,432	1/1:23,0:23:25.42:395,25,0	1/1:21,0:21:17.81:393,18,0	0/0:31,0:29:72.25:0,72,1313	0/0:26,0:26:69.23:0,69,1102	0/0:25,0:25:72.25:0,72,1289	0/0:17,0:17:42.14:0,42,689	1/1:17,0:17:11.34:277,11,0	0/0:31,0:31:81.26:0,81,1329	0/1:27,0:27:3.16:281,0,3	0/0:23,0:23:42.13:0,42,658	0/0:25,0:25:42.14:0,42,697	0/0:24,0:24:66.22:0,66,1074	1/1:20,0:20:25.48:310,25,0	1/1:15,4:18:2.25:306,2,0	0/1:12,2:14:1.14:60,0,1	0/0:20,0:20:26.85:0,27,454	0/1:15,0:15:16.57:72,0,17	0/0:21,0:21:32.87:0,33,504	0/0:17,0:17:26.66:0,27,393	0/0:20,0:20:45.92:0,46,937	0/0:16,0:16:45.13:0,45,721	0/1:27,1:28:29.67:391,0,30	0/0:12,0:12:24.08:0,24,382
chr10	88163367	.	A	ACATCAT	8214.38	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=11.147;DP=558;FS=0.000;HRun=0;HaplotypeScore=168.5651;InbreedingCoeff=0.2000;MQ=62.21;MQ0=1;MQRankSum=-13.437;QD=20.48;ReadPosRankSum=0.075;VQSLOD=4.3565;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.22:0,63,1473	0/0:6,0:6:15.05:0,15,245	0/0:16,0:13:27.09:0,27,590	0/0:24,0:21:61.24:0,61,1124	0/1:16,0:16:99:153,0,259	1/1:22,0:22:18.01:536,18,0	1/1:20,0:20:14.47:520,14,0	0/1:33,0:31:99:366,0,1468	0/1:25,0:25:99:216,0,1003	0/0:26,0:26:78.16:0,78,1465	0/0:19,0:19:42.13:0,42,813	1/1:14,0:14:16.98:549,17,0	0/1:30,0:30:99:418,0,765	1/1:25,0:25:31.92:1061,32,0	0/1:21,0:21:66.23:66,0,625	0/1:23,0:23:99:237,0,359	0/0:26,0:26:66.21:0,66,1061	1/1:16,0:16:11.24:354,11,0	1/1:17,1:17:49.35:820,49,0	1/1:13,2:15:12.50:284,12,0	0/1:19,0:19:14.28:14,0,520	1/1:15,0:15:28.94:914,29,0	0/1:18,0:18:99:111,0,398	0/1:16,0:16:99:122,0,260	0/0:19,0:19:51.18:0,51,1230	0/1:17,0:17:99:144,0,550	1/1:21,5:26:63.20:1281,63,0	0/1:12,0:12:48.06:48,0,345
chr10	88163370	.	A	ACATCATCAT	15554.62	PASS	AB=0.659;AC=41;AF=0.732;AN=56;BaseQRankSum=0.263;DP=620;FS=0.693;HRun=0;HaplotypeScore=209.9346;InbreedingCoeff=0.7875;MQ=59.77;MQ0=1;MQRankSum=-9.691;QD=32.41;ReadPosRankSum=-0.953;VQSLOD=4.0736;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:22:45.10:0,45,1152	0/0:1,0:6:4.98:0,5,10	0/0:17,0:13:14.32:0,14,192	0/0:27,0:21:6.02:0,6,158	1/1:4,11:18:15.05:679,15,0	1/1:24,0:24:25.12:494,25,0	1/1:20,0:20:12.04:309,12,0	1/1:36,0:34:54.12:1429,54,0	1/1:21,9:33:27.09:1209,27,0	0/1:13,0:27:21.90:52,0,22	0/0:10,0:20:7.48:0,7,16	1/1:12,0:12:15.05:398,15,0	1/1:15,16:32:48.12:2051,48,0	1/1:24,0:24:33.11:873,33,0	1/1:12,9:26:9.03:408,9,0	1/1:11,15:27:27.09:1224,27,0	0/0:5,0:27:22.31:0,22,49	1/1:16,0:16:14.55:329,15,0	1/1:26,0:26:40.17:888,40,0	1/1:18,0:18:6.49:228,6,0	1/1:21,0:21:9.02:226,9,0	1/1:15,0:15:30.10:841,30,0	1/1:7,10:19:12.04:544,12,0	1/1:7,8:18:12.01:543,12,0	0/0:21,0:21:33.10:0,33,785	1/1:11,1:21:43.59:1391,44,0	1/1:29,0:29:38.95:944,39,0	1/1:11,0:18:15.01:497,15,0
chr10	88163403	.	T	TCATCAC	10618.50	PASS	AB=0.968;AC=31;AF=0.554;AN=56;BaseQRankSum=16.732;DP=668;FS=4.661;HRun=0;HaplotypeScore=194.2479;InbreedingCoeff=-0.0511;MQ=55.43;MQ0=1;MQRankSum=-11.241;QD=19.77;ReadPosRankSum=3.987;VQSLOD=4.1657;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.05:0,72,1249	0/1:7,0:7:8.72:9,0,35	0/0:29,0:25:62.58:0,63,708	0/0:27,0:17:44.97:0,45,517	0/1:24,0:24:99:256,0,222	1/1:19,4:24:59.89:922,60,0	1/1:2,14:20:15.01:454,15,0	0/1:45,0:43:99:586,0,587	0/1:25,0:25:99:432,0,168	0/1:20,0:20:12.50:13,0,181	0/0:23,0:23:13.73:0,14,254	1/1:1,17:21:15.05:542,15,0	0/1:24,0:24:99:780,0,100	1/1:3,20:27:33.11:1193,33,0	0/1:20,0:20:99:145,0,187	0/1:25,0:25:99:434,0,154	0/1:34,0:34:22.38:22,0,215	0/1:1,16:20:1.71:421,0,2	1/1:24,0:25:70.73:731,71,0	1/1:20,0:22:35.89:464,36,0	0/1:20,0:20:99:124,0,131	1/1:2,19:23:33.04:1099,33,0	0/1:23,0:23:99:190,0,250	0/1:21,0:21:99:207,0,160	0/0:24,0:24:69.06:0,69,996	0/1:18,0:18:99:302,0,206	1/1:24,0:29:71.89:1167,72,0	0/1:19,0:19:99:126,0,267
chr10	88163418	.	TAAC	T	794.25	PASS	AB=0.918;AC=11;AF=0.196;AN=56;BaseQRankSum=9.524;DP=648;FS=38.074;HRun=0;HaplotypeScore=165.8785;InbreedingCoeff=0.2326;MQ=56.80;MQ0=0;MQRankSum=-3.466;QD=4.54;ReadPosRankSum=-1.622;VQSLOD=1.1523;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.24:0,78,1568	0/0:10,0:10:23.87:0,24,466	0/0:29,0:26:60.54:0,61,1163	0/0:26,0:17:42.10:0,42,688	0/0:28,0:28:66.09:0,66,1149	0/1:21,3:24:44.05:148,0,44	1/1:12,2:14:8.51:77,9,0	0/0:35,0:35:90.29:0,90,1739	0/0:27,0:27:66.08:0,66,1189	0/0:24,0:24:63.22:0,63,1327	0/0:29,0:29:75.08:0,75,1451	1/1:17,2:19:9.71:100,10,0	0/0:24,0:24:53.96:0,54,880	0/1:19,1:20:39.47:111,0,39	0/0:23,0:23:54.18:0,54,1053	0/0:25,0:25:66.10:0,66,1234	0/0:36,0:36:93.24:0,93,1854	0/1:15,1:16:2.44:53,0,2	0/1:17,3:20:38.52:206,0,39	0/1:18,1:19:21.85:99,0,22	0/0:15,0:15:36.05:0,36,666	0/1:16,3:19:76.64:102,0,77	0/0:22,0:22:57.18:0,57,1092	0/0:21,0:21:45.08:0,45,846	0/0:28,0:28:54.52:0,55,1507	0/0:23,0:23:66.15:0,66,1125	0/1:23,1:24:53.29:53,0,127	0/0:21,0:21:57.20:0,57,1206
chr10	88163603	.	CCAGT	C	5204.93	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.553;DP=522;FS=0.419;HRun=0;HaplotypeScore=93.1999;InbreedingCoeff=0.9907;MQ=79.00;MQ0=1;MQRankSum=-4.310;QD=42.66;ReadPosRankSum=2.921;VQSLOD=5.1547;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:63.15:0,63,1499	0/0:5,0:5:15.03:0,15,344	0/0:15,0:15:39.13:0,39,970	0/0:14,0:14:25.15:0,25,531	0/0:20,0:20:42.13:0,42,1024	1/1:2,10:12:21.07:392,21,0	1/1:0,9:9:21.03:356,21,0	0/0:29,0:29:78.27:0,78,2044	0/0:17,0:17:45.15:0,45,1182	0/0:20,0:20:51.14:0,51,1294	0/0:12,0:12:30.10:0,30,765	1/1:2,15:17:42.14:784,42,0	0/0:26,0:26:72.25:0,72,1918	1/1:2,14:16:42.14:766,42,0	0/0:22,0:22:60.21:0,60,1566	0/0:11,0:11:27.09:0,27,719	0/0:31,0:31:87.28:0,87,2236	1/1:1,19:19:48.16:887,48,0	1/1:2,5:7:15.02:246,15,0	1/1:3,17:20:48.08:824,48,0	0/0:36,0:36:93.32:0,93,2433	1/1:1,6:7:15.05:280,15,0	0/0:14,0:14:36.12:0,36,959	0/0:29,0:29:84.25:0,84,2141	0/0:29,0:29:84.29:0,84,2240	0/0:21,0:21:54.19:0,54,1433	1/1:1,13:14:36.12:671,36,0	0/0:24,0:24:66.23:0,66,1759
chr10	88163742	.	TGAGAGA	T	200.78	PASS	AB=1.000;AC=13;AF=0.650;AN=20;BaseQRankSum=2.793;DP=370;FS=20.792;HRun=0;HaplotypeScore=86.1416;InbreedingCoeff=0.3483;MQ=80.52;MQ0=9;MQRankSum=-2.793;QD=1.84;ReadPosRankSum=0.135;VQSLOD=0.2577;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/1:42,0:22:0:0,0,0	./.	./.	./.	./.	1/1:9,1:10:3.01:54,3,0	./.	./.	1/1:14,0:14:2.98:22,3,0	1/1:5,0:6:3.31:15,3,0	1/1:13,0:14:3.01:42,3,0	1/1:6,3:9:3.01:54,3,0	./.	./.	0/0:11,0:11:0.47:0,0,1	./.	./.	./.	./.	0/0:9,0:9:9.03:0,9,131	./.	./.	0/0:11,0:11:0.89:0,1,2	1/1:13,0:13:6.02:96,6,0	./.
chr10	88163795	.	GA	G	187.12	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=3.571;DP=335;FS=9.041;HRun=1;HaplotypeScore=70.9059;InbreedingCoeff=0.6151;MQ=43.44;MQ0=26;MQRankSum=-5.052;QD=6.93;ReadPosRankSum=-1.873;VQSLOD=-0.6376;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:15:38.99:0,39,464	1/1:0,1:1:3.01:38,3,0	0/0:18,0:4:11.93:0,12,123	0/0:32,0:3:9.03:0,9,108	0/0:20,0:20:27.08:0,27,337	0/0:17,0:17:41.96:0,42,500	0/0:15,0:15:33.10:0,33,410	0/0:11,0:10:24.60:0,25,290	0/0:5,0:5:2.76:0,3,44	1/1:4,6:6:15.04:180,15,0	1/1:4,5:8:2.61:23,3,0	0/0:11,0:11:30.08:0,30,360	0/0:10,0:10:26.98:0,27,331	0/0:9,0:9:17.91:0,18,224	0/0:13,0:13:11.16:0,11,181	0/0:7,0:6:14.94:0,15,187	0/1:7,0:5:4.89:71,0,5	0/0:12,0:11:30.50:0,31,339	0/0:6,0:5:7.90:0,8,76	0/0:6,0:4:8.95:0,9,71	0/0:15,0:14:36.03:0,36,449	0/0:9,0:8:18.43:0,18,225	0/0:14,0:13:17.55:0,18,224	0/0:12,0:10:16.79:0,17,221	0/0:10,0:10:21.07:0,21,262	0/0:16,0:16:46.22:0,46,517	0/0:13,0:10:11.27:0,11,128	0/0:9,0:8:16.86:0,17,192
chr10	88163811	.	A	AG	509.95	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.139;DP=373;FS=3.660;HRun=1;HaplotypeScore=85.7324;InbreedingCoeff=0.8230;MQ=52.56;MQ0=20;MQRankSum=-2.278;QD=18.21;ReadPosRankSum=0.918;VQSLOD=3.9981;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:50.93:0,51,581	0/0:2,0:2:4.56:0,5,38	0/0:28,0:8:15.04:0,15,182	0/0:42,0:8:18.53:0,19,228	0/0:19,0:19:46.36:0,46,277	0/0:18,0:17:43:0,43,241	0/0:15,0:15:43.10:0,43,238	0/0:14,0:13:29.84:0,30,374	0/0:5,0:5:14.70:0,15,92	0/0:13,0:9:13.71:0,14,118	0/0:10,0:9:20.76:0,21,187	0/0:13,0:13:34.24:0,34,186	0/0:10,0:10:28.80:0,29,159	0/0:11,0:11:31.90:0,32,192	0/0:10,0:10:23.17:0,23,161	0/0:7,0:6:17.27:0,17,93	0/0:6,0:5:8.30:0,8,45	0/0:12,0:12:34.30:0,34,181	1/1:4,1:4:3.47:75,3,0	1/1:6,2:6:15.05:189,15,0	0/0:15,0:15:36.99:0,37,469	0/0:9,0:9:23.69:0,24,110	0/0:13,0:12:32.80:0,33,168	0/0:12,0:11:24.77:0,25,129	0/0:12,0:12:36.12:0,36,467	0/0:18,0:18:50.56:0,51,553	1/1:7,8:13:29.93:375,30,0	0/0:10,0:10:9.55:0,10,320
chr10	88163831	.	G	GGA	5561.05	PASS	AB=0.929;AC=34;AF=0.607;AN=56;BaseQRankSum=1.298;DP=398;FS=5.294;HRun=0;HaplotypeScore=88.0633;InbreedingCoeff=0.5214;MQ=61.72;MQ0=10;MQRankSum=-4.786;QD=19.58;ReadPosRankSum=-0.776;VQSLOD=4.4032;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:41.73:0,42,612	1/1:0,2:2:6.02:99,6,0	0/1:24,0:10:12.68:13,0,146	0/1:39,0:16:5.68:6,0,119	1/1:6,13:19:39.12:618,39,0	0/0:17,0:16:39.04:0,39,441	0/0:19,0:19:39.10:0,39,462	1/1:16,3:17:16.16:419,16,0	1/1:2,3:5:12.04:193,12,0	1/1:10,5:14:30.10:465,30,0	0/1:7,5:12:51.50:226,0,51	0/0:9,0:9:18.06:0,18,225	1/1:4,6:10:21.07:341,21,0	0/0:9,0:9:21.07:0,21,262	1/1:5,6:12:21.07:341,21,0	1/1:6,3:9:21.07:318,21,0	1/1:5,1:5:3.01:49,3,0	0/0:12,0:12:30.07:0,30,360	0/1:11,0:10:59.64:60,0,63	0/1:12,0:11:25.96:26,0,69	1/1:5,6:11:17.80:294,18,0	0/0:9,0:9:27.09:0,27,337	1/1:7,7:14:24.08:388,24,0	1/1:1,6:7:15.05:247,15,0	0/0:15,0:15:19.99:0,20,431	1/1:5,13:18:42.14:688,42,0	0/1:15,0:14:70.30:70,0,76	1/1:9,11:20:16.62:703,17,0
chr10	88163864	.	TA	T	3770.43	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=8.369;DP=421;FS=9.220;HRun=10;HaplotypeScore=89.2995;InbreedingCoeff=0.9273;MQ=74.89;MQ0=0;MQRankSum=-3.145;QD=14.73;ReadPosRankSum=0.443;VQSLOD=3.2078;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.11:0,66,693	1/1:1,6:7:17.95:149,18,0	0/0:18,0:14:18.48:0,18,207	0/0:20,0:15:29.83:0,30,266	1/1:2,0:23:40.52:120,41,0	0/0:13,1:14:13.06:0,13,372	0/0:16,0:16:36.64:0,37,400	1/1:4,18:20:50.90:429,51,0	1/1:0,0:11:18.33:54,18,0	1/1:1,16:17:47.90:398,48,0	1/1:3,16:19:41.88:355,42,0	0/0:12,0:12:30.03:0,30,317	1/1:1,0:10:18.33:54,18,0	0/0:12,0:12:33.08:0,33,358	1/1:1,0:13:22.41:66,22,0	1/1:0,0:12:22.41:66,22,0	1/1:1,6:7:17.99:156,18,0	0/0:13,0:12:36.10:0,36,398	1/1:3,17:20:50.95:433,51,0	1/1:1,14:15:41.96:358,42,0	1/1:4,6:10:4.10:139,4,0	0/0:16,1:17:22.07:0,22,463	1/1:0,0:19:34.63:102,35,0	1/1:1,0:4:4.07:12,4,0	0/0:18,2:20:5.02:0,5,492	1/1:7,7:14:20.98:182,21,0	1/1:6,7:13:23.95:203,24,0	1/1:1,19:20:56.98:494,57,0
chr10	88165266	.	GACAGCT	G	11967.72	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.256;DP=787;FS=7.866;HRun=0;HaplotypeScore=194.4397;InbreedingCoeff=0.9997;MQ=89.97;MQ0=0;MQRankSum=-18.974;QD=61.37;ReadPosRankSum=3.208;VQSLOD=4.7359;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,148,5058	0/0:9,0:9:27.08:0,27,887	0/0:35,0:35:99:0,105,3357	0/0:34,0:34:75.68:0,76,2673	1/1:2,20:22:45.15:1081,45,0	0/0:22,0:22:66.23:0,66,2307	0/0:29,0:29:84.27:0,84,2915	0/0:32,0:32:93.32:0,93,3288	1/1:1,25:26:75.26:1802,75,0	0/0:27,0:27:78.25:0,78,2526	0/0:11,0:11:33.11:0,33,1188	0/0:31,0:31:93.32:0,93,3271	1/1:1,33:34:96.33:2291,96,0	0/0:29,0:29:84.29:0,84,3011	1/1:1,43:44:99:2812,120,0	1/1:2,29:31:84.29:2018,84,0	0/0:37,0:37:99:0,111,3979	0/0:16,0:16:48.16:0,48,1604	0/0:32,0:32:87.30:0,87,3081	0/0:27,0:27:81.26:0,81,2804	0/0:48,0:48:99:0,141,4926	0/0:27,0:27:81.27:0,81,2829	1/1:2,16:18:45.15:1028,45,0	1/1:1,19:20:38.73:936,39,0	0/0:21,0:21:60.21:0,60,2120	0/0:28,0:28:84.29:0,84,2929	0/0:33,0:32:93.32:0,93,3256	0/0:14,0:14:30.10:0,30,1033
chr10	88165835	.	C	CATTAGTT	20678.51	PASS	AB=0.964;AC=19;AF=0.339;AN=56;BaseQRankSum=0.911;DP=712;FS=2.582;HRun=0;HaplotypeScore=156.2887;InbreedingCoeff=0.9199;MQ=91.52;MQ0=0;MQRankSum=-19.564;QD=80.46;ReadPosRankSum=-1.215;VQSLOD=5.3290;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,3502	0/0:13,0:13:39.13:0,39,999	0/0:34,0:34:80.41:0,80,2055	0/0:31,0:31:81.75:0,82,1640	0/0:27,0:27:81.26:0,81,2015	1/1:8,25:34:96.33:3440,96,0	1/1:6,14:22:51.17:1910,51,0	0/0:30,0:30:84.27:0,84,2002	0/0:37,0:37:99:0,105,2655	0/0:22,0:22:66.23:0,66,1720	0/0:16,0:16:45.15:0,45,1123	1/1:4,15:20:57.16:1928,57,0	0/0:17,0:17:51.18:0,51,1277	1/1:8,18:31:69.19:2360,69,0	0/0:17,0:17:51.16:0,51,1291	0/0:13,0:13:36.12:0,36,905	0/0:39,0:39:99:0,111,2821	1/1:2,7:11:24.08:968,24,0	1/1:15,12:27:69:2292,69,0	1/1:5,14:19:57.20:2058,57,0	0/0:41,0:41:99:0,114,2844	1/1:7,26:36:93.27:3266,93,0	0/0:11,0:11:30.10:0,30,773	0/0:29,0:29:81.25:0,81,2005	0/0:17,0:17:51.15:0,51,1280	0/1:26,1:27:39.58:40,0,1943	1/1:8,19:30:69.24:2416,69,0	0/0:12,0:12:36.12:0,36,935
chr10	88166375	.	TAACA	T	5167.82	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=6.213;DP=664;FS=0.844;HRun=0;HaplotypeScore=156.1462;InbreedingCoeff=0.9845;MQ=57.23;MQ0=1;MQRankSum=4.408;QD=29.70;ReadPosRankSum=2.745;VQSLOD=4.5361;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:93.31:0,93,2054	0/0:11,0:11:27.08:0,27,553	0/0:29,0:20:31.04:0,31,853	0/0:17,0:16:14.08:0,14,710	1/1:6,23:29:63.21:1032,63,0	0/0:22,0:22:29.77:0,30,456	0/0:14,0:14:12.04:0,12,166	0/0:25,0:25:48.16:0,48,1154	1/1:9,18:27:45.15:737,45,0	0/0:37,0:37:87.30:0,87,2119	0/0:24,0:24:57.20:0,57,1378	0/0:20,0:20:29.67:0,30,443	1/1:7,12:19:33.11:541,33,0	0/0:26,0:26:39.13:0,39,661	1/1:7,13:20:39.13:639,39,0	1/1:5,13:18:30.10:492,30,0	0/0:23,0:23:42.14:0,42,1024	0/0:16,0:16:12.04:0,12,174	0/0:19,0:19:40.35:0,40,628	0/0:21,0:21:35.79:0,36,582	0/0:26,0:26:48.16:0,48,1133	0/0:22,0:22:38.61:0,39,585	1/1:15,14:29:42.08:646,42,0	1/1:7,25:32:66.23:1081,66,0	0/0:21,0:21:51.18:0,51,1244	0/0:41,0:41:96.33:0,96,2290	0/0:24,0:24:38.99:0,39,607	0/0:14,0:14:30.05:0,30,629
chr10	88166399	.	A	AAACAAACAAAC	14607.49	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-11.892;DP=726;FS=1.815;HRun=0;HaplotypeScore=215.0613;InbreedingCoeff=0.9879;MQ=64.79;MQ0=0;MQRankSum=-12.317;QD=61.12;ReadPosRankSum=3.261;VQSLOD=4.8489;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,3003	0/0:13,0:13:33.11:0,33,789	0/0:44,0:37:81.52:0,82,1581	0/0:23,0:22:42.68:0,43,1145	0/0:27,0:27:76.81:0,77,1898	1/1:2,19:29:27.09:1401,27,0	1/1:2,14:19:9.03:513,9,0	0/0:33,0:33:99:0,99,2112	0/0:25,0:25:66.20:0,66,1501	0/0:34,0:34:99:0,102,2826	0/0:28,0:28:81.27:0,81,2207	1/1:2,21:26:30.06:1542,30,0	0/0:18,0:18:47.37:0,47,1065	1/1:3,22:34:33.11:1782,33,0	0/0:16,0:16:48.10:0,48,1103	0/0:18,0:18:45.15:0,45,1058	0/0:22,0:22:52.62:0,53,1711	1/1:4,11:18:15.05:723,15,0	1/1:4,19:26:66.22:2596,66,0	1/1:1,19:22:36.12:1913,36,0	0/0:21,0:21:57.19:0,57,1537	1/1:3,22:26:39.13:1953,39,0	0/0:19,0:19:53.75:0,54,1037	0/0:29,0:29:76.98:0,77,1746	0/0:28,0:28:84.26:0,84,2177	0/0:37,0:37:99:0,105,2995	1/1:1,30:39:38.72:2185,39,0	0/0:10,0:10:30.10:0,30,932
chr10	88167005	.	A	AT	2120.67	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-10.329;DP=448;FS=0.494;HRun=7;HaplotypeScore=54.5879;InbreedingCoeff=0.8754;MQ=71.80;MQ0=1;MQRankSum=-0.142;QD=22.80;ReadPosRankSum=1.289;VQSLOD=3.5108;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.11:0,69,666	0/0:8,0:8:15.01:0,15,145	0/0:11,0:9:9.01:0,9,85	0/1:14,0:9:28.42:28,0,31	0/0:27,0:27:69.10:0,69,666	1/1:0,17:17:39.12:471,39,0	1/1:0,13:13:36.11:435,36,0	0/0:18,0:18:45.07:0,45,434	0/0:10,0:10:27.04:0,27,260	0/0:29,0:29:66.08:0,66,629	0/0:15,0:15:42.05:0,42,401	1/1:1,8:9:21.06:254,21,0	0/0:9,0:9:21.03:0,21,203	1/1:2,11:13:30.09:362,30,0	0/0:21,0:21:60.07:0,60,570	0/0:18,0:18:51.08:0,51,492	0/0:28,0:28:75.56:0,76,717	1/1:1,21:22:51.16:614,51,0	0/0:18,0:18:54.07:0,54,511	0/0:18,0:18:42.05:0,42,399	0/0:9,0:9:27.04:0,27,259	1/1:0,5:5:12.04:145,12,0	0/0:18,0:18:47.90:0,48,445	0/0:14,0:14:39.05:0,39,371	0/0:10,0:10:30.05:0,30,289	0/0:22,0:22:63.10:0,63,608	0/0:20,0:20:60.08:0,60,572	0/0:8,0:8:15.02:0,15,145
chr10	88167028	.	GA	G	3030.76	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=6.615;DP=475;FS=5.049;HRun=7;HaplotypeScore=54.0949;InbreedingCoeff=0.9913;MQ=72.21;MQ0=0;MQRankSum=-0.006;QD=25.05;ReadPosRankSum=3.079;VQSLOD=4.3520;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.24:0,75,942	0/0:4,0:4:12.04:0,12,151	0/0:8,0:7:21.07:0,21,264	0/0:12,0:9:21:0,21,232	1/1:0,28:28:81.10:812,81,0	0/0:18,0:18:48.15:0,48,604	0/0:14,0:14:39.10:0,39,465	0/0:25,0:25:63.20:0,63,793	1/1:1,10:11:30.07:306,30,0	0/0:23,0:23:63.20:0,63,792	0/0:15,0:15:45.13:0,45,553	0/0:11,0:11:33.08:0,33,389	1/1:0,11:11:27.06:275,27,0	0/0:12,0:12:30.08:0,30,364	1/1:1,20:21:54.12:551,54,0	1/1:2,16:18:42.09:428,42,0	0/0:33,0:33:90.76:0,91,1133	0/0:23,0:23:48.13:0,48,588	0/0:19,0:19:57.18:0,57,717	0/0:21,0:21:63.20:0,63,792	0/0:8,0:8:24.08:0,24,302	0/0:8,0:8:21.05:0,21,251	1/1:1,17:18:48.11:489,48,0	1/1:0,14:14:36.08:367,36,0	0/0:18,0:18:54.15:0,54,655	0/0:23,0:23:66.21:0,66,828	0/0:20,0:20:51.15:0,51,629	0/0:10,0:10:30.10:0,30,375
chr10	88167687	.	CCCACT	C	13939.10	PASS	AB=0.944;AC=35;AF=0.625;AN=56;BaseQRankSum=4.256;DP=550;FS=6.823;HRun=0;HaplotypeScore=129.5429;InbreedingCoeff=0.9174;MQ=83.05;MQ0=0;MQRankSum=-8.611;QD=40.64;ReadPosRankSum=3.877;VQSLOD=4.6692;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:87.30:0,87,2606	1/1:1,9:10:27.09:523,27,0	0/0:19,0:19:57.05:0,57,1425	0/0:21,0:21:42.14:0,42,1184	1/1:4,11:15:24.04:394,24,0	1/1:2,18:20:36.12:709,36,0	1/1:3,25:28:56.93:1065,57,0	0/0:25,0:25:60.21:0,60,1733	1/1:7,14:21:36.12:731,36,0	1/1:2,17:19:51.17:1014,51,0	1/1:0,14:14:30.06:568,30,0	1/1:2,24:26:69.19:1337,69,0	1/1:4,22:26:57.20:1157,57,0	1/1:3,11:14:24.08:487,24,0	1/1:0,25:25:72.24:1386,72,0	1/1:2,9:11:24.08:487,24,0	1/1:1,18:19:36.12:731,36,0	1/1:2,20:22:48.16:974,48,0	0/0:19,0:19:51.17:0,51,1366	0/0:11,0:11:33.11:0,33,999	0/0:33,0:33:87.30:0,87,2540	1/1:0,21:21:54.18:1043,54,0	1/1:2,11:13:20.94:400,21,0	1/1:2,20:22:42.14:853,42,0	0/0:21,0:21:57.20:0,57,1718	0/1:16,1:17:79.59:80,0,992	0/0:19,0:19:51.16:0,51,1424	0/0:4,0:4:12.04:0,12,345
chr10	88167691	.	CTCCA	C	4390.88	PASS	AB=0.969;AC=28;AF=0.500;AN=56;BaseQRankSum=15.831;DP=534;FS=2.881;HRun=0;HaplotypeScore=149.6323;InbreedingCoeff=0.4672;MQ=82.64;MQ0=0;MQRankSum=-10.067;QD=13.35;ReadPosRankSum=8.199;VQSLOD=3.7058;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.31:0,90,2557	1/1:9,1:10:22.37:174,22,0	0/0:19,0:19:37.47:0,37,1414	0/0:23,0:23:69.14:0,69,1608	0/1:14,0:14:80.02:80,0,104	1/1:18,0:18:32.81:242,33,0	0/1:27,0:27:3.74:296,0,4	0/0:25,0:25:72.24:0,72,1922	0/1:18,1:19:76.38:217,0,76	1/1:17,0:17:50.23:353,50,0	1/1:14,0:14:16.92:185,17,0	1/1:24,0:24:51.33:447,51,0	1/1:25,1:26:0.86:356,1,0	0/1:13,1:14:39.08:146,0,39	1/1:25,0:25:56.97:452,57,0	0/1:10,0:10:8.41:149,0,8	1/1:18,0:18:35.80:264,36,0	1/1:22,0:22:14.90:315,15,0	0/0:20,0:20:60.21:0,60,1670	0/0:11,0:11:33.11:0,33,956	0/0:33,0:33:96.28:0,96,2585	1/1:21,0:21:42.80:344,43,0	0/1:12,1:13:5.20:109,0,5	0/1:22,0:22:14.70:260,0,15	0/0:20,0:20:60.21:0,60,1678	0/1:14,1:15:1.37:1,0,1018	0/0:17,0:17:51.18:0,51,1441	0/0:4,0:4:12.04:0,12,348
chr10	88167757	.	TCGCCACCAGCTGTGG	T	4370.96	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.925;DP=526;FS=8.405;HRun=0;HaplotypeScore=254.5632;InbreedingCoeff=0.9881;MQ=78.76;MQ0=0;MQRankSum=-8.126;QD=89.20;ReadPosRankSum=2.710;VQSLOD=3.1518;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.29:0,84,6172	1/1:3,6:9:18.06:820,18,0	0/0:17,0:17:48.16:0,48,2605	0/0:14,0:13:15.42:0,15,1497	0/0:13,0:13:36.12:0,36,2321	0/0:19,0:19:54.19:0,54,3307	0/0:28,0:27:69.15:0,69,4194	0/0:22,0:22:63.22:0,63,4030	0/0:19,0:19:51.11:0,51,3537	1/1:3,6:9:18.06:820,18,0	1/1:6,9:15:23.69:1092,24,0	0/0:21,0:21:60.21:0,60,3317	0/0:21,0:21:57.18:0,57,3752	0/0:15,0:15:39.09:0,39,2334	0/0:26,0:26:72.03:0,72,4573	0/0:15,0:15:45.15:0,45,3206	1/1:4,12:15:36.12:1639,36,0	0/0:28,0:28:78.27:0,78,5077	0/0:13,0:13:36.12:0,36,2171	0/0:19,0:19:57.10:0,57,3702	0/0:42,0:42:99:0,111,7109	0/0:17,0:17:36.12:0,36,2429	0/0:14,0:14:27.09:0,27,1888	0/0:23,0:23:63.22:0,63,4259	0/0:17,0:17:51.16:0,51,3256	0/0:17,0:17:48.16:0,48,3457	0/0:19,0:19:54.19:0,54,3652	0/0:6,0:6:18.06:0,18,1209
chr10	88169266	.	TCTGAGCC	T	1822.37	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.684;DP=517;FS=14.737;HRun=0;HaplotypeScore=127.4519;InbreedingCoeff=0.9892;MQ=73.57;MQ0=0;MQRankSum=-7.446;QD=56.95;ReadPosRankSum=0.858;VQSLOD=2.8280;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,4176	0/0:8,0:8:24.08:0,24,936	0/0:19,0:18:45.15:0,45,1525	0/0:20,0:20:51.17:0,51,1806	0/0:20,0:20:57.20:0,57,2234	0/0:15,0:15:42.14:0,42,1621	0/0:14,0:14:42.14:0,42,1671	0/0:25,0:25:69.22:0,69,2444	0/0:16,0:16:48.16:0,48,1916	0/0:21,0:21:63.21:0,63,2362	0/0:18,0:18:48.16:0,48,1895	0/0:15,0:15:42.13:0,42,1555	0/0:15,0:15:45.15:0,45,1798	0/0:14,0:14:42.14:0,42,1646	0/0:18,0:18:54.09:0,54,1775	0/0:15,0:15:39.13:0,39,1552	0/0:30,0:30:87.30:0,87,3398	0/0:21,0:21:60.21:0,60,2327	1/1:2,6:8:21.07:513,21,0	1/1:1,17:18:39.13:1011,39,0	0/0:43,0:43:99:0,126,5008	0/0:15,0:15:45.15:0,45,1749	0/0:13,0:13:39.09:0,39,1388	0/0:27,0:27:78.27:0,78,3045	0/0:20,0:20:60.21:0,60,2398	0/0:19,0:19:54.17:0,54,1862	1/1:0,6:6:18.06:439,18,0	0/0:5,0:5:15.05:0,15,556
chr10	88171173	.	T	TCTC	8950.37	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-4.077;DP=704;FS=0.000;HRun=0;HaplotypeScore=126.7617;InbreedingCoeff=0.9609;MQ=53.05;MQ0=19;MQRankSum=-0.537;QD=29.74;ReadPosRankSum=-1.037;VQSLOD=4.5695;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,15:35:74.59:1288,75,0	1/1:1,10:11:14.97:259,15,0	0/0:83,0:19:14.81:0,15,158	0/0:79,0:22:20.69:0,21,259	0/0:25,0:25:51.16:0,51,695	1/1:9,0:16:27.08:364,27,0	1/1:14,0:18:30.02:362,30,0	1/1:18,10:27:30.08:480,30,0	0/0:25,0:25:55.13:0,55,769	1/1:16,16:32:57.15:995,57,0	1/1:2,19:21:51.17:984,51,0	1/1:11,0:19:34.64:432,35,0	0/0:13,0:13:30.09:0,30,409	1/1:8,0:14:27.09:361,27,0	0/0:12,0:13:3.07:0,3,355	0/0:24,0:24:57.16:0,57,757	1/1:4,12:16:36.12:726,36,0	1/1:9,0:12:24.03:310,24,0	0/0:4,0:11:23.74:0,24,164	0/0:16,0:25:53.26:0,53,394	1/1:5,15:19:17.81:419,18,0	1/1:11,0:21:53.99:662,54,0	0/0:27,0:27:69.14:0,69,895	0/0:27,0:27:60.15:0,60,826	0/0:23,0:23:45.13:0,45,617	1/1:3,21:24:60.17:1127,60,0	0/0:13,0:27:50.10:0,50,357	1/1:4,5:10:9.03:182,9,0
chr10	88171234	.	CTT	C	789.48	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.221;DP=601;FS=5.949;HRun=2;HaplotypeScore=179.0168;InbreedingCoeff=0.9459;MQ=59.66;MQ0=12;MQRankSum=-6.961;QD=15.48;ReadPosRankSum=0.246;VQSLOD=0.8141;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.84:0,85,879	0/0:13,0:13:30.97:0,31,389	0/0:44,0:21:42.45:0,42,822	0/0:68,0:26:51.14:0,51,787	0/0:20,0:20:42.65:0,43,581	0/0:16,0:16:41.79:0,42,446	0/0:18,0:18:48.13:0,48,487	0/0:19,0:18:39.13:0,39,792	0/0:25,0:25:61.69:0,62,706	0/0:31,0:31:30.33:0,30,720	0/0:15,0:15:7.94:0,8,298	0/0:16,0:14:42.10:0,42,481	0/0:10,0:9:27.06:0,27,304	0/0:11,0:10:26.53:0,27,310	0/0:14,0:14:39.09:0,39,413	0/0:20,0:20:60.06:0,60,608	0/0:17,0:17:31.02:0,31,447	0/0:19,0:19:31.17:0,31,533	1/1:1,5:6:14.96:121,15,0	1/1:2,12:14:9.62:203,10,0	0/0:25,0:25:66.23:0,66,1324	0/0:20,0:20:51.08:0,51,539	0/0:22,0:22:65.76:0,66,662	0/0:25,0:25:61.75:0,62,646	0/0:18,0:18:54.19:0,54,1087	0/0:21,0:21:63.22:0,63,1228	1/1:4,27:31:48.46:601,48,0	0/0:7,0:7:18.06:0,18,318
chr10	88171237	.	CCT	C	781	PASS	AB=0.615;AC=5;AF=0.089;AN=56;BaseQRankSum=7.830;DP=604;FS=7.338;HRun=0;HaplotypeScore=180.3316;InbreedingCoeff=0.7821;MQ=58.69;MQ0=15;MQRankSum=-6.335;QD=14.46;ReadPosRankSum=0.629;VQSLOD=2.9404;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:71.52:0,72,827	0/0:13,0:13:34.55:0,35,391	0/0:42,0:19:44.73:0,45,714	0/0:66,0:26:26.17:0,26,753	0/0:20,0:20:33.79:0,34,577	0/0:18,0:18:43.15:0,43,460	0/0:18,0:18:48.18:0,48,497	0/0:20,0:19:45.15:0,45,856	0/0:26,0:26:65.08:0,65,721	0/0:30,0:30:51.96:0,52,738	0/0:15,0:15:30.46:0,30,304	0/0:17,0:15:38.73:0,39,468	0/0:10,0:9:27.04:0,27,296	0/0:11,0:10:26.60:0,27,308	0/0:16,0:16:42.07:0,42,439	0/0:21,0:21:63.11:0,63,652	0/0:16,0:16:45:0,45,442	0/0:18,0:18:48.61:0,49,562	0/1:3,5:8:10.31:86,0,10	1/1:4,11:15:11.24:197,11,0	0/0:25,0:25:66.23:0,66,1324	0/0:21,0:21:51.05:0,51,521	0/0:24,0:24:68.52:0,69,675	0/0:25,0:25:60.45:0,60,640	0/0:18,0:18:54.19:0,54,1096	0/0:19,0:19:57.20:0,57,1141	1/1:4,27:31:65.74:623,66,0	0/0:9,0:9:24.06:0,24,389
chr10	88171258	.	TTC	T	9649.62	PASS	AB=0.964;AC=36;AF=0.643;AN=56;BaseQRankSum=10.827;DP=598;FS=2.594;HRun=0;HaplotypeScore=129.4378;InbreedingCoeff=0.8830;MQ=61.46;MQ0=14;MQRankSum=-0.767;QD=25.46;ReadPosRankSum=2.634;VQSLOD=5.8040;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:33:75.20:936,75,0	0/0:14,0:14:39.12:0,39,627	0/1:39,0:17:6.19:6,0,143	0/0:55,0:23:24.25:0,24,252	1/1:2,20:22:60.12:728,60,0	1/1:4,17:21:54.16:676,54,0	1/1:4,21:25:51.12:631,51,0	0/0:22,0:22:45.15:0,45,752	1/1:4,19:23:57.18:725,57,0	0/0:31,0:31:81.26:0,81,1291	0/1:12,1:13:2.08:2,0,491	1/1:3,15:16:42.13:534,42,0	1/1:2,7:8:15.05:186,15,0	1/1:1,9:9:27.09:340,27,0	1/1:0,15:15:42.10:517,42,0	1/1:3,16:19:45.14:573,45,0	0/0:15,0:15:45.13:0,45,718	1/1:3,17:20:54.16:669,54,0	1/1:3,5:8:11.66:152,12,0	1/1:4,14:18:42.07:499,42,0	0/0:23,0:23:51.17:0,51,843	1/1:1,14:15:39.12:496,39,0	1/1:2,22:24:54.17:687,54,0	1/1:2,16:18:30.10:382,30,0	0/0:17,0:17:42.14:0,42,703	0/0:26,0:26:72.25:0,72,1180	1/1:3,25:28:72.23:910,72,0	0/0:16,0:16:48.16:0,48,802
chr10	88171331	.	TTTTC	T	5271.42	PASS	AB=0.594;AC=11;AF=0.196;AN=56;BaseQRankSum=11.406;DP=665;FS=0.394;HRun=0;HaplotypeScore=127.2040;InbreedingCoeff=0.8862;MQ=64.92;MQ0=3;MQRankSum=-1.214;QD=41.18;ReadPosRankSum=3.145;VQSLOD=5.1340;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:78.21:0,78,1743	0/0:13,0:13:33.11:0,33,809	0/0:30,0:18:24.77:0,25,640	0/0:43,0:29:37.67:0,38,623	0/0:23,0:23:63.18:0,63,1487	1/1:7,21:28:63.21:1056,63,0	1/1:7,6:12:28.65:461,29,0	0/0:25,0:24:66.23:0,66,1594	0/0:25,0:25:66.23:0,66,1631	0/0:36,0:36:90.31:0,90,2241	0/0:20,0:20:54.19:0,54,1352	1/1:6,13:19:51.15:830,51,0	0/0:21,0:21:57.16:0,57,1326	1/1:3,16:19:48.16:838,48,0	0/0:22,0:22:66.23:0,66,1641	0/0:24,0:24:60.21:0,60,1439	0/0:24,0:24:69.24:0,69,1696	0/1:6,13:18:38.07:684,0,38	0/0:15,0:15:33.11:0,33,756	0/0:18,0:18:48.16:0,48,1184	0/0:20,0:20:54.19:0,54,1374	1/1:2,28:30:81.28:1403,81,0	0/0:28,0:28:66.22:0,66,1489	0/0:25,0:25:57.20:0,57,1412	0/0:20,0:20:57.20:0,57,1373	0/0:27,0:27:75.24:0,75,1745	0/0:28,0:28:72.25:0,72,1821	0/0:15,0:15:42.14:0,42,894
chr10	88171339	.	CT	C	741	PASS	AB=0.985;AC=9;AF=0.161;AN=56;BaseQRankSum=14.860;DP=678;FS=0.000;HRun=3;HaplotypeScore=99.7837;InbreedingCoeff=0.6116;MQ=63.72;MQ0=3;MQRankSum=-2.341;QD=5.88;ReadPosRankSum=3.906;VQSLOD=0.6104;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:92.19:0,92,1193	0/0:12,0:12:36.12:0,36,517	0/0:31,0:15:33.89:0,34,503	0/0:39,0:26:47.85:0,48,595	0/0:24,0:24:72.21:0,72,1004	1/1:25,1:26:13.35:198,13,0	0/1:13,0:12:11.92:88,0,12	0/0:28,0:28:78.72:0,79,1087	0/0:27,0:27:78.23:0,78,1081	0/0:38,0:38:99:0,108,1515	0/0:20,0:20:57.19:0,57,817	1/1:15,3:18:40.68:199,41,0	0/0:26,0:26:70.05:0,70,897	1/1:16,2:18:37.16:124,37,0	0/0:24,0:24:72.24:0,72,1031	0/0:23,0:23:66.22:0,66,938	0/0:25,0:25:72.24:0,72,1035	0/1:20,1:20:54.45:147,0,54	0/0:15,0:15:42.14:0,42,597	0/0:16,0:16:48.15:0,48,675	0/0:21,0:21:63.21:0,63,899	0/1:30,0:30:14.18:141,0,14	0/0:26,0:26:66.20:0,66,925	0/0:26,0:26:63.21:0,63,903	0/0:22,0:22:66.22:0,66,938	0/0:27,0:27:81.26:0,81,1128	0/0:31,0:31:84.28:0,84,1192	0/0:15,0:15:45.15:0,45,631
chr10	88172219	.	C	CGT	3780.71	PASS	AB=0.863;AC=20;AF=0.357;AN=56;BaseQRankSum=-6.384;DP=684;FS=12.518;HRun=0;HaplotypeScore=135.2900;InbreedingCoeff=0.1354;MQ=52.50;MQ0=31;MQRankSum=3.925;QD=10.27;ReadPosRankSum=-2.524;VQSLOD=2.4355;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:65.92:0,66,671	0/0:8,0:8:2.88:0,3,24	0/1:28,0:13:9.59:10,0,45	0/0:27,0:9:4.52:0,5,66	0/0:24,0:23:20.77:0,21,184	1/1:2,8:10:18.05:258,18,0	0/1:13,14:26:73.43:255,0,73	0/1:18,0:26:38:63,0,38	0/0:24,0:23:19.75:0,20,96	0/0:18,0:19:25.84:0,26,153	0/0:14,0:15:6.04:0,6,38	1/1:12,11:22:15.52:223,16,0	0/0:20,0:20:8.47:0,8,61	0/1:19,16:34:97.89:378,0,98	0/0:33,0:33:19.79:0,20,96	0/1:21,0:20:18.67:19,0,19	0/0:25,0:34:6.97:0,7,106	0/1:6,11:20:4.34:387,0,4	1/1:22,0:22:23.26:262,23,0	1/1:17,0:16:42.01:501,42,0	0/1:51,0:52:99:526,0,116	0/1:11,8:17:99:205,0,103	0/0:16,0:16:6.93:0,7,31	0/0:43,0:42:2.84:0,3,14	0/0:14,0:17:28.45:0,28,339	1/1:28,0:26:5.84:272,6,0	0/1:12,0:12:21.76:255,0,22	0/1:14,0:14:22.39:167,0,22
chr10	88172238	.	GTGTGTGTGTT	G	2535.56	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=1.262;DP=731;FS=0.496;HRun=0;HaplotypeScore=218.5737;InbreedingCoeff=0.4691;MQ=51.84;MQ0=38;MQRankSum=-4.678;QD=8.37;ReadPosRankSum=2.321;VQSLOD=2.6302;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:37:99:0,108,2711	0/1:8,0:8:67.27:80,0,67	0/0:30,0:12:32.21:0,32,373	0/0:32,0:10:29.95:0,30,435	0/1:21,0:20:74.07:76,0,74	0/0:11,0:10:21.02:0,21,847	0/0:27,0:25:41.02:0,41,1323	0/0:28,0:25:37.13:0,37,807	1/1:2,23:23:23.98:738,24,0	0/1:31,0:26:50.45:50,0,542	0/0:20,0:19:27.62:0,28,296	0/0:23,0:22:35.11:0,35,931	1/1:2,15:17:10.11:248,10,0	0/0:30,0:29:57.61:0,58,2200	1/1:1,35:36:24.08:714,24,0	1/1:3,19:21:8.55:266,9,0	0/1:36,0:36:82.18:82,0,536	0/0:21,0:21:46.29:0,46,1507	0/0:19,0:18:44.85:0,45,780	0/1:25,0:24:14.73:15,0,1215	0/0:60,0:50:69.68:0,70,2822	0/0:23,0:20:49.21:0,49,1457	1/1:3,18:21:8.40:294,8,0	1/1:5,41:45:8.94:149,9,0	0/0:17,0:16:31.15:0,31,1628	0/0:33,0:30:36.91:0,37,1492	0/1:15,0:15:11.80:12,0,849	0/0:14,0:14:27.08:0,27,982
chr10	88172239	.	TGTGTG	T	1605.04	PASS	AB=0.875;AC=15;AF=0.268;AN=56;BaseQRankSum=10.837;DP=727;FS=2.241;HRun=0;HaplotypeScore=176.3187;InbreedingCoeff=0.3174;MQ=51.97;MQ0=37;MQRankSum=-8.350;QD=5.69;ReadPosRankSum=5.129;VQSLOD=1.9381;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:37:92.18:0,92,1358	1/1:2,5:9:11.47:216,11,0	0/0:29,0:11:33.10:0,33,544	0/0:32,0:10:30.10:0,30,561	0/1:21,0:20:16.79:17,0,194	0/0:11,0:10:24.08:0,24,552	0/0:28,0:26:51.12:0,51,1027	0/0:29,0:26:72.94:0,73,757	1/1:25,0:23:8.73:206,9,0	0/1:22,8:27:60.76:369,0,61	0/1:8,10:19:49.01:164,0,49	0/0:23,0:22:45.62:0,46,877	0/1:17,0:17:33.12:62,0,33	0/0:30,0:29:60.15:0,60,1448	0/1:36,0:36:11.76:197,0,12	1/1:21,0:20:7.83:78,8,0	0/1:23,11:36:99:351,0,116	0/0:21,0:21:48.16:0,48,1083	0/0:18,0:17:51.17:0,51,1067	0/0:25,0:24:66.22:0,66,1312	0/0:59,0:49:99:0,130,1847	0/0:23,0:20:45.10:0,45,1040	1/1:20,0:20:8.60:95,9,0	0/1:45,0:44:22.60:23,0,61	0/0:17,0:16:42.14:0,42,1123	0/0:32,0:29:76.43:0,76,993	0/0:15,0:15:45.13:0,45,939	0/0:14,0:14:26.58:0,27,507
chr10	88172240	.	GTGTGTGTT	G	1914.58	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=5.884;DP=725;FS=0.942;HRun=0;HaplotypeScore=201.2305;InbreedingCoeff=0.5009;MQ=52.00;MQ0=37;MQRankSum=-5.288;QD=5.61;ReadPosRankSum=3.625;VQSLOD=2.4356;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:37:0.69:1,0,1937	0/1:9,0:9:33.40:33,0,48	0/0:29,0:11:32.26:0,32,346	0/0:32,0:10:29.89:0,30,300	1/1:4,17:20:16:374,16,0	0/0:11,0:10:24.02:0,24,718	0/0:29,0:27:31.49:0,31,1123	0/0:29,0:26:12.73:0,13,640	1/1:25,0:23:23.97:456,24,0	0/1:33,0:28:82.79:83,0,393	0/0:20,0:19:10.78:0,11,224	0/0:23,0:22:39.81:0,40,767	1/1:16,0:16:8.50:152,9,0	0/0:28,0:27:57.13:0,57,1783	1/1:36,0:36:20.18:438,20,0	1/1:20,0:20:8.53:160,9,0	0/1:36,0:36:74.43:74,0,400	0/0:21,0:21:46.62:0,47,1184	0/0:18,0:17:41.41:0,41,566	0/1:25,0:24:35.71:36,0,821	0/0:58,0:48:43.28:0,43,2227	0/0:23,0:20:49.16:0,49,1157	1/1:20,0:20:8.20:188,8,0	1/1:45,0:44:6.41:80,6,0	0/0:17,0:16:41.50:0,41,1297	0/0:32,0:29:39.13:0,39,1213	0/1:15,0:15:30.22:30,0,635	0/0:14,0:14:27.08:0,27,778
chr10	88172244	.	G	GTT	5865.63	PASS	AB=0.966;AC=27;AF=0.482;AN=56;BaseQRankSum=-2.035;DP=742;FS=15.486;HRun=1;HaplotypeScore=138.9051;InbreedingCoeff=0.0774;MQ=52.38;MQ0=35;MQRankSum=-0.458;QD=11.35;ReadPosRankSum=2.059;VQSLOD=0.5351;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:38:47.12:298,0,47	1/1:10,0:10:27.18:204,27,0	0/0:32,0:13:25.44:0,25,280	0/0:33,0:13:32.92:0,33,331	0/0:19,0:19:19.91:0,20,104	0/1:11,0:10:23.14:88,0,23	0/1:31,0:29:99:122,0,298	1/1:27,1:25:49.27:516,49,0	0/0:25,0:23:16.59:0,17,95	1/1:34,0:29:64.31:481,64,0	1/1:22,0:21:23.97:310,24,0	0/1:23,0:22:74.43:74,0,156	0/0:16,0:16:11.32:0,11,54	0/1:29,0:28:99:145,0,247	0/0:36,0:36:16.61:0,17,91	0/1:21,0:20:19.29:25,0,19	1/1:39,0:39:50.74:514,51,0	0/1:22,0:22:92.86:177,0,93	0/1:17,0:16:67.77:68,0,85	0/1:26,0:25:99:144,0,170	1/1:42,16:48:10.80:1352,11,0	0/1:24,0:21:66.59:67,0,281	0/1:20,0:20:8.10:8,0,19	0/0:45,0:44:8.69:0,9,48	0/0:18,0:17:10.30:0,10,501	1/1:4,27:28:55.65:864,56,0	0/1:17,0:17:76.29:76,0,207	0/1:3,11:14:2.95:333,0,3
chr10	88172246	.	GTT	G	1130.34	PASS	AB=0.989;AC=18;AF=0.321;AN=56;BaseQRankSum=2.135;DP=743;FS=0.417;HRun=3;HaplotypeScore=154.9142;InbreedingCoeff=0.6047;MQ=52.56;MQ0=35;MQRankSum=-3.036;QD=4.30;ReadPosRankSum=-1.056;VQSLOD=-0.6016;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:38:99:0,103,1434	0/0:10,0:10:14.04:0,14,124	0/0:32,0:13:6.81:0,7,221	0/0:34,0:15:24.66:0,25,289	0/1:19,0:18:33.28:33,0,89	0/0:12,0:11:26.98:0,27,243	0/0:30,1:29:33.52:0,34,559	0/0:28,0:25:6.06:0,6,427	1/1:25,0:23:23.77:165,24,0	0/0:36,0:31:58.14:0,58,584	0/0:23,0:22:41.56:0,42,349	0/1:20,1:20:28.81:29,0,241	0/1:16,0:16:21.67:46,0,22	0/0:29,1:29:38.65:0,39,655	1/1:36,0:36:23.76:163,24,0	1/1:20,0:19:8.86:69,9,0	0/0:40,0:40:64.15:0,64,579	0/0:22,0:22:25.47:0,25,313	1/1:8,8:15:20.60:178,21,0	1/1:26,1:26:14.66:343,15,0	0/0:57,0:47:32.15:0,32,1079	0/0:24,0:21:52:0,52,522	1/1:20,0:20:8.23:62,8,0	1/1:45,0:44:8.82:55,9,0	0/0:18,0:17:29.38:0,29,639	0/0:29,0:26:40.79:0,41,670	0/1:18,0:18:24.68:181,0,25	0/0:14,0:14:18.84:0,19,317
chr10	88172891	.	G	GA	9846.45	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-12.147;DP=683;FS=2.592;HRun=9;HaplotypeScore=78.5659;InbreedingCoeff=0.9970;MQ=76.04;MQ0=0;MQRankSum=0.125;QD=26.19;ReadPosRankSum=2.597;VQSLOD=5.3776;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:29:84.01:895,84,0	0/0:9,0:9:23.97:0,24,205	0/0:18,0:16:14.93:0,15,130	0/0:17,0:17:23.21:0,23,173	1/1:8,43:51:99:1410,134,0	1/1:5,22:27:54:732,54,0	1/1:2,20:22:54.15:597,54,0	0/0:25,0:25:62.97:0,63,545	1/1:2,25:27:60.16:664,60,0	0/0:28,0:28:74.95:0,75,645	0/0:25,0:25:70.54:0,71,603	1/1:2,14:16:42.11:461,42,0	1/1:2,17:19:33.05:365,33,0	1/1:2,17:20:48.13:528,48,0	1/1:3,19:22:30.74:541,31,0	1/1:3,26:30:63:677,63,0	0/0:35,0:35:72.75:0,73,618	1/1:1,13:14:42.01:447,42,0	0/0:15,0:15:38.96:0,39,334	0/0:35,1:36:58.77:0,59,716	0/0:15,0:15:38.95:0,39,330	1/1:7,26:34:81.04:867,81,0	1/1:4,30:35:82.77:900,83,0	1/1:3,27:30:69.19:763,69,0	0/0:26,0:26:35.79:0,36,536	0/0:17,0:17:44.98:0,45,389	0/0:25,0:25:74.99:0,75,651	0/0:16,0:16:44.96:0,45,384
chr10	88172961	.	TA	T	1885.07	PASS	AB=0.770;AC=25;AF=0.446;AN=56;BaseQRankSum=6.899;DP=630;FS=5.572;HRun=14;HaplotypeScore=97.3476;InbreedingCoeff=0.5271;MQ=73.15;MQ0=1;MQRankSum=0.229;QD=5.78;ReadPosRankSum=2.123;VQSLOD=2.8651;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:29:66.13:0,66,378	1/1:3,6:12:23.91:141,24,0	0/0:24,1:18:9.45:0,9,75	0/1:20,1:13:2.21:2,0,35	0/0:34,3:41:4.29:0,4,510	1/1:6,1:19:29.60:98,30,0	1/1:5,0:16:24.76:72,25,0	0/0:16,1:20:26.56:0,27,200	0/0:26,0:26:56.82:0,57,494	0/1:10,16:29:8.16:266,0,8	0/1:9,7:16:31.95:96,0,32	1/1:2,0:15:29.07:87,29,0	0/0:29,0:29:47.92:0,48,420	1/1:5,1:13:17.21:62,17,0	0/1:20,0:20:9.51:10,0,173	0/0:20,2:25:12.32:0,12,338	1/1:8,22:32:38.43:329,38,0	1/1:4,0:25:40.73:118,41,0	0/1:8,9:17:40.56:146,0,41	1/1:4,18:25:33.47:347,33,0	0/0:7,0:9:20.54:0,21,154	1/1:9,0:25:33.78:97,34,0	0/0:25,1:26:33.42:0,33,437	0/1:17,3:21:31.31:31,0,292	0/0:17,0:22:41.71:0,42,359	0/0:23,0:28:62.20:0,62,500	0/1:6,12:20:3.72:188,0,4	0/0:20,0:23:56.48:0,56,470
chr10	88174249	.	T	TAAA	4003.06	PASS	AB=0.930;AC=38;AF=0.679;AN=56;BaseQRankSum=0.134;DP=483;FS=11.519;HRun=17;HaplotypeScore=81.6322;InbreedingCoeff=0.6503;MQ=58.81;MQ0=10;MQRankSum=-5.134;QD=11.21;ReadPosRankSum=-0.254;VQSLOD=-0.5145;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:24:54.01:547,54,0	0/1:5,0:9:0.36:0,0,80	0/0:25,0:10:8.13:0,8,64	0/1:22,0:6:4.68:5,0,11	1/1:28,0:28:47.62:412,48,0	1/1:3,15:20:9:118,9,0	1/1:4,9:13:5.98:68,6,0	0/1:26,0:32:16.49:16,0,122	1/1:10,0:10:20.90:195,21,0	0/0:17,0:19:19.04:0,19,164	0/0:15,0:17:7.28:0,7,177	1/1:18,0:18:19.73:384,20,0	1/1:15,0:15:14.89:123,15,0	1/1:5,0:12:10.23:78,10,0	1/1:4,8:13:11.94:126,12,0	1/1:13,0:12:29.93:279,30,0	0/0:15,0:20:41.34:0,41,316	1/1:17,1:21:40.99:383,41,0	1/1:27,0:27:53.89:362,54,0	1/1:19,0:19:32.28:275,32,0	0/0:9,0:11:14.51:0,15,125	1/1:8,0:8:11.94:95,12,0	1/1:16,0:16:22.60:164,23,0	1/1:9,0:9:8.98:82,9,0	0/0:10,0:12:11.27:0,11,87	0/0:17,0:21:9.35:0,9,162	1/1:16,0:16:30.52:274,31,0	0/1:5,0:8:15.41:15,0,33
chr10	88174272	.	CACTG	C	1417.42	PASS	AB=0.600;AC=5;AF=0.089;AN=56;BaseQRankSum=2.889;DP=414;FS=1.482;HRun=0;HaplotypeScore=83.3921;InbreedingCoeff=0.8029;MQ=78.16;MQ0=2;MQRankSum=-5.002;QD=32.21;ReadPosRankSum=1.750;VQSLOD=3.2142;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:32.32:0,32,797	0/0:6,0:6:15.05:0,15,393	0/0:20,0:16:33.10:0,33,737	0/0:19,0:11:26.22:0,26,551	0/0:14,0:14:33.11:0,33,878	0/0:15,0:15:30.10:0,30,719	0/0:17,0:17:42.14:0,42,1120	0/0:29,0:29:54.19:0,54,1407	0/0:14,0:14:39.13:0,39,1038	0/0:16,0:16:45.15:0,45,1157	0/0:17,0:17:42.14:0,42,1068	0/0:17,0:17:39.13:0,39,1038	0/0:8,0:8:15.05:0,15,397	0/0:13,0:13:27.09:0,27,642	0/0:12,0:12:27.09:0,27,670	0/0:6,0:6:15.01:0,15,333	0/0:22,0:22:63.22:0,63,1645	0/0:24,0:24:63.22:0,63,1651	0/1:7,14:20:2.98:656,0,3	1/1:0,15:15:36.05:609,36,0	0/0:18,0:18:48.16:0,48,1180	0/0:12,0:12:24.08:0,24,593	0/0:10,0:10:8.83:0,9,239	0/0:10,0:10:18.06:0,18,440	0/0:9,0:9:24.08:0,24,616	0/0:20,0:20:45.15:0,45,1050	1/1:2,6:8:15.05:279,15,0	0/0:5,0:5:12.04:0,12,320
chr10	88174704	.	A	AACCCC	4985.30	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.530;DP=637;FS=25.011;HRun=0;HaplotypeScore=110.3279;InbreedingCoeff=0.9958;MQ=91.58;MQ0=0;MQRankSum=-5.237;QD=68.29;ReadPosRankSum=1.863;VQSLOD=3.9041;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,2696	1/1:0,6:6:18.06:550,18,0	0/0:36,0:36:83.15:0,83,1609	0/0:20,0:20:45.12:0,45,883	0/0:17,0:17:45.15:0,45,923	0/0:23,0:23:69.23:0,69,1381	0/0:28,0:28:66.23:0,66,1352	0/0:26,0:26:75.25:0,75,1498	0/0:29,0:29:72.25:0,72,1448	1/1:4,10:14:30.09:835,30,0	1/1:4,11:15:30.10:912,30,0	0/0:27,0:27:69.24:0,69,1415	0/0:25,0:25:63.20:0,63,1255	0/0:14,0:14:42.13:0,42,825	0/0:25,0:25:72.25:0,72,1461	0/0:21,0:21:63.22:0,63,1292	1/1:5,31:38:90.31:2688,90,0	0/0:19,0:19:45.10:0,45,811	0/0:14,0:14:30.10:0,30,615	0/0:9,0:9:21.07:0,21,420	0/0:39,0:39:99:0,105,2142	0/0:11,0:11:27.09:0,27,554	0/0:13,0:13:39.13:0,39,800	0/0:32,0:32:96.31:0,96,1919	0/0:14,0:14:36.12:0,36,738	0/0:22,0:22:60.21:0,60,1218	0/0:31,0:30:87.29:0,87,1749	0/0:22,0:22:57.20:0,57,1169
chr10	88174958	.	C	CATTTATTTATT	2199.75	PASS	AB=0.966;AC=18;AF=0.333;AN=54;BaseQRankSum=3.010;DP=286;FS=18.404;HRun=0;HaplotypeScore=91.9406;InbreedingCoeff=-0.0652;MQ=71.58;MQ0=1;MQRankSum=-5.635;QD=12.29;ReadPosRankSum=-3.142;VQSLOD=-0.4311;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:33.11:0,33,571	./.	0/0:11,0:9:15.02:0,15,189	0/0:6,0:5:3.01:0,3,42	0/0:17,0:17:30.09:0,30,436	0/1:11,0:11:26.98:112,0,27	0/1:5,0:5:15.10:15,0,112	0/1:33,0:32:1.71:2,0,927	0/0:10,0:10:12.04:0,12,272	0/1:4,0:4:75.02:122,0,75	0/1:11,0:11:65.62:66,0,75	0/1:5,0:5:21.37:21,0,75	0/0:12,0:12:12.04:0,12,342	0/1:6,0:6:20.67:21,0,36	0/0:5,0:5:12.02:0,12,136	0/0:3,0:3:3.01:0,3,34	0/1:17,0:16:99:230,0,358	0/1:13,0:13:23.98:132,0,24	1/1:5,0:5:12.03:266,12,0	1/1:7,7:14:24.08:626,24,0	0/1:3,0:4:32.99:85,0,33	0/0:7,0:7:9.03:0,9,125	0/0:12,0:12:14.66:0,15,174	0/0:3,0:3:6.02:0,6,81	0/0:7,0:7:12.03:0,12,219	0/1:13,0:13:90.60:91,0,263	1/1:6,8:14:8.67:477,9,0	0/1:17,0:23:99:100,0,540
chr10	88174972	.	T	TTTATTTA	1575.62	PASS	AB=1.000;AC=20;AF=0.385;AN=52;BaseQRankSum=-0.282;DP=227;FS=5.782;HRun=0;HaplotypeScore=54.9086;InbreedingCoeff=0.2027;MQ=51.58;MQ0=2;MQRankSum=-2.533;QD=14.19;ReadPosRankSum=2.847;VQSLOD=1.2777;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:99:156,0,160	./.	./.	0/0:2,0:1:3:0,3,25	0/0:14,0:14:5.50:0,6,122	1/1:1,7:8:12.04:462,12,0	1/1:1,1:2:3.01:106,3,0	0/0:44,0:39:90.30:0,90,1260	0/0:9,0:9:6.02:0,6,98	0/0:3,0:3:9.03:0,9,126	0/0:3,0:3:6.02:0,6,84	1/1:2,2:4:3.01:116,3,0	0/0:10,0:10:12.04:0,12,195	1/1:1,3:4:3.01:105,3,0	0/0:3,0:3:2.58:0,3,48	0/0:1,0:1:0.47:0,0,1	0/1:16,0:15:32.78:33,0,250	1/1:1,12:13:15.05:529,15,0	0/0:6,0:6:18.04:0,18,209	0/1:5,0:5:68.49:102,0,68	0/1:3,0:3:13.92:29,0,14	1/1:3,0:3:3.01:37,3,0	1/1:7,0:7:2.19:6,2,0	0/0:2,0:2:3.01:0,3,49	0/0:4,0:4:9.01:0,9,171	0/0:10,0:10:20.92:0,21,250	0/1:9,0:8:22.96:23,0,96	0/1:23,0:23:27.86:28,0,618
chr10	88174975	.	ATTTATTTAT	A	1253.96	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=3.749;DP=220;FS=7.454;HRun=0;HaplotypeScore=59.9423;InbreedingCoeff=0.6872;MQ=49.78;MQ0=3;MQRankSum=-0.807;QD=26.68;ReadPosRankSum=0.478;VQSLOD=1.7960;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:33.17:0,33,432	./.	0/0:4,0:2:0:0,0,0	0/0:2,0:1:3.01:0,3,41	1/1:1,13:14:36.11:544,36,0	0/0:8,0:8:12.04:0,12,474	0/0:2,0:2:3.01:0,3,94	0/0:38,0:32:96.33:0,96,2797	1/1:0,8:8:6.02:186,6,0	0/0:3,0:3:9.03:0,9,230	0/0:4,0:4:12.04:0,12,362	0/0:4,0:4:6.02:0,6,163	1/1:0,12:12:12.04:372,12,0	0/0:3,0:3:3.01:0,3,92	1/1:0,3:3:6.02:130,6,0	1/1:1,0:2:6.02:74,6,0	0/0:16,0:15:34.36:0,34,698	0/0:13,0:13:18.06:0,18,614	0/0:7,0:7:21.07:0,21,511	0/0:4,0:4:12.04:0,12,518	0/0:4,0:4:12.04:0,12,262	0/0:2,0:2:5.98:0,6,98	1/1:0,6:6:4.80:72,5,0	1/1:2,0:2:3.01:37,3,0	0/0:5,0:5:12.04:0,12,376	0/0:9,0:9:27.09:0,27,765	0/0:9,0:8:12.04:0,12,469	0/0:23,0:23:54.15:0,54,1575
chr10	88174979	.	AT	A	385.23	PASS	AB=0.522;AC=19;AF=0.352;AN=54;BaseQRankSum=5.023;DP=217;FS=0.797;HRun=3;HaplotypeScore=36.3644;InbreedingCoeff=0.5215;MQ=48.78;MQ0=3;MQRankSum=-0.829;QD=6.32;ReadPosRankSum=1.991;VQSLOD=0.6428;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:1,11:12:5.81:367,0,6	./.	0/0:5,0:2:3.01:0,3,41	0/0:2,0:1:3:0,3,25	1/1:13,0:13:2.45:15,2,0	0/0:8,0:8:0.04:0,0,55	1/1:1,0:1:3:28,3,0	0/0:38,0:31:93.31:0,93,1301	1/1:8,0:8:4.44:14,4,0	0/0:4,0:4:12.03:0,12,154	0/0:5,0:5:12.04:0,12,167	0/0:3,0:3:2.60:0,3,10	1/1:12,0:12:8.88:28,9,0	1/1:3,0:3:3:28,3,0	1/1:3,0:3:2.22:8,2,0	0/0:2,0:2:2.84:0,3,9	0/0:16,0:14:33.02:0,33,418	0/0:13,0:13:13.09:0,13,68	0/0:8,0:8:24.07:0,24,304	0/0:4,0:4:12.04:0,12,158	0/0:4,0:4:12.04:0,12,165	1/1:0,2:2:3.01:37,3,0	1/1:6,0:6:1.69:4,2,0	1/1:1,0:1:1.25:3,1,0	0/0:5,0:5:15.03:0,15,191	0/0:8,0:8:21.06:0,21,281	0/0:9,0:8:12.04:0,12,170	0/0:22,0:22:51.16:0,51,701
chr10	88175531	.	CTGTG	C	2553.60	PASS	AB=0.854;AC=21;AF=0.375;AN=56;BaseQRankSum=9.021;DP=649;FS=2.383;HRun=0;HaplotypeScore=169.7888;InbreedingCoeff=0.7832;MQ=57.29;MQ0=4;MQRankSum=-5.581;QD=8.93;ReadPosRankSum=-0.514;VQSLOD=3.1684;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:50:45.12:0,45,812	1/1:5,9:14:18.06:286,18,0	0/0:19,0:11:3.01:0,3,63	0/0:14,0:9:2.97:0,3,20	0/0:25,1:28:47.87:0,48,973	0/0:14,0:19:6.49:0,6,105	0/0:30,0:30:12.04:0,12,248	1/1:23,0:33:19.56:168,20,0	0/0:13,0:20:27.09:0,27,552	1/1:12,13:28:46.40:686,46,0	1/1:9,11:22:15.05:239,15,0	0/0:18,0:24:15.05:0,15,260	0/0:19,0:23:43.69:0,44,923	0/0:9,0:14:9.03:0,9,168	0/0:21,0:22:42.10:0,42,1052	0/0:13,0:13:33.08:0,33,649	1/1:14,13:28:30.10:457,30,0	0/0:13,0:17:12.04:0,12,217	1/1:17,0:23:14.97:140,15,0	1/1:9,1:24:18.03:187,18,0	0/1:22,0:24:0:0,0,0	0/1:11,0:20:0:0,0,0	0/0:22,0:21:28.30:0,28,675	0/0:33,0:34:54.79:0,55,1232	0/0:14,0:14:27.07:0,27,516	1/1:12,0:23:18.02:168,18,0	1/1:13,0:29:32.85:305,33,0	0/1:7,0:16:17.36:117,0,17
chr10	88175569	.	G	GCA	804.40	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-0.582;DP=662;FS=9.309;HRun=0;HaplotypeScore=155.9779;InbreedingCoeff=0.2556;MQ=51.67;MQ0=10;MQRankSum=4.355;QD=2.23;ReadPosRankSum=-3.237;VQSLOD=1.0070;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,38:49:11.81:204,12,0	0/0:15,0:15:0.22:0,0,5	1/1:25,0:3:2.04:6,2,0	0/0:35,0:7:14.80:0,15,137	0/1:27,0:27:21.25:21,0,139	1/1:13,0:13:7.35:54,7,0	1/1:28,0:28:8.12:56,8,0	0/0:41,0:40:99:0,114,1466	0/1:19,0:19:43.79:225,0,44	0/1:33,0:33:0.04:88,0,0	0/1:17,0:17:2.16:2,0,22	1/1:21,0:21:7.96:74,8,0	0/0:25,0:25:7.58:0,8,206	1/1:5,0:5:2.98:27,3,0	0/1:26,0:26:36.30:36,0,147	0/1:17,0:17:13.76:14,0,71	0/1:32,0:32:7.34:67,0,7	1/1:10,0:10:6.49:36,6,0	0/1:14,0:12:10.54:32,0,11	0/1:25,0:25:17.14:32,0,17	0/0:26,0:26:39.13:0,39,536	0/0:22,2:24:1.04:0,1,4	0/0:18,0:17:20.08:0,20,132	0/0:39,0:39:32.77:0,33,228	0/0:18,0:18:48.13:0,48,656	0/0:19,0:19:51.12:0,51,652	0/0:24,0:24:24.95:0,25,72	0/0:16,0:15:33.11:0,33,437
chr10	88176225	.	A	AGATGGCATG	61558.31	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-10.634;DP=750;FS=0.648;HRun=0;HaplotypeScore=178.5304;InbreedingCoeff=0.9986;MQ=72.55;MQ0=0;MQRankSum=-19.280;QD=111.72;ReadPosRankSum=2.350;VQSLOD=5.1489;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,14:34:66.23:2944,66,0	1/1:3,5:9:20.71:894,21,0	0/0:24,0:25:63.65:0,64,1777	0/0:17,0:17:48.10:0,48,1227	1/1:10,23:36:78.22:3628,78,0	1/1:5,15:23:54.19:2569,54,0	1/1:6,16:24:54.19:2491,54,0	0/0:33,0:33:96.31:0,96,2677	1/1:10,18:30:84.29:3721,84,0	1/1:15,28:46:99:5914,129,0	1/1:8,12:22:39.13:1846,39,0	1/1:6,22:29:81.28:3696,81,0	1/1:5,16:25:60.21:2936,60,0	1/1:5,18:23:69.24:3299,69,0	1/1:7,25:37:90.31:4409,90,0	1/1:7,15:24:60.21:2774,60,0	1/1:5,10:18:45.15:2128,45,0	1/1:1,7:10:24.08:1120,24,0	1/1:12,12:25:72.20:2883,72,0	1/1:8,21:33:72.20:3372,72,0	0/0:38,0:38:99:0,105,3265	1/1:9,22:33:81.28:3781,81,0	1/1:2,14:20:45.01:2218,45,0	1/1:10,10:21:27.03:1323,27,0	0/0:30,0:30:87.29:0,87,2614	0/0:36,0:36:99:0,108,3406	1/1:8,18:29:75.26:3611,75,0	0/0:20,0:20:60.21:0,60,1833
chr10	88178255	.	CT	C	12738.23	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=13.612;DP=688;FS=2.940;HRun=5;HaplotypeScore=77.8334;InbreedingCoeff=0.9996;MQ=86.38;MQ0=0;MQRankSum=-4.129;QD=29.62;ReadPosRankSum=2.463;VQSLOD=5.5801;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,48:53:99:1242,111,0	1/1:1,16:17:42.12:476,42,0	0/0:26,0:26:69.19:0,69,886	0/0:19,0:19:54.15:0,54,697	1/1:3,23:26:69.20:783,69,0	0/0:21,0:21:57.17:0,57,750	0/0:22,0:22:63.19:0,63,844	1/1:2,37:39:99:1230,111,0	1/1:2,25:27:69.20:783,69,0	1/1:1,23:24:69.20:783,69,0	1/1:0,14:14:33.09:374,33,0	0/0:26,0:26:69.22:0,69,927	1/1:1,26:27:69.20:783,69,0	0/0:25,0:25:75.25:0,75,1025	1/1:1,22:23:63.18:714,63,0	1/1:1,25:26:69.20:783,69,0	1/1:1,35:36:99:1123,99,0	0/0:16,0:16:48.16:0,48,656	0/0:16,0:15:42.13:0,42,561	0/0:22,0:22:66.22:0,66,903	1/1:2,33:35:93.26:1050,93,0	0/0:13,0:13:33.11:0,33,451	1/1:0,15:15:42.12:476,42,0	1/1:2,34:36:96.27:1087,96,0	0/0:28,0:28:81.26:0,81,1093	1/1:2,22:24:69.19:779,69,0	0/0:24,0:24:72.23:0,72,968	1/1:0,8:8:24.07:272,24,0
chr10	88178429	.	C	CAG	29660.87	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-0.372;DP=664;FS=5.367;HRun=0;HaplotypeScore=113.3411;InbreedingCoeff=0.9992;MQ=79.91;MQ0=0;MQRankSum=-8.349;QD=48.47;ReadPosRankSum=2.526;VQSLOD=5.7720;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,50:51:99:2540,132,0	1/1:2,13:15:42.14:806,42,0	0/0:17,0:17:48.13:0,48,674	0/0:20,0:20:51.15:0,51,727	1/1:4,23:27:51.17:983,51,0	1/1:0,16:17:45.15:869,45,0	1/1:0,20:20:51.17:985,51,0	1/1:4,25:32:93.24:1648,93,0	1/1:2,29:31:84.29:1617,84,0	1/1:3,15:18:51.13:947,51,0	1/1:3,18:21:43.72:865,44,0	1/1:1,18:19:45.05:864,45,0	1/1:4,22:27:63.19:1177,63,0	1/1:1,22:23:66.23:1271,66,0	1/1:1,13:14:36.12:694,36,0	1/1:0,17:17:39.13:753,39,0	1/1:6,41:48:99:2315,121,0	1/1:1,23:24:63.22:1217,63,0	1/1:4,17:24:69.12:1136,69,0	1/1:1,18:19:48.16:927,48,0	1/1:5,37:42:90.31:1737,90,0	1/1:0,21:21:54.19:1043,54,0	1/1:2,23:25:66.23:1273,66,0	1/1:2,26:28:66.23:1274,66,0	0/0:15,0:15:45.15:0,45,689	1/1:2,15:17:48.16:927,48,0	1/1:1,23:24:69.24:1330,69,0	1/1:0,8:8:24.08:464,24,0
chr10	88178821	.	ATG	A	17637.71	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=12.254;DP=761;FS=3.256;HRun=0;HaplotypeScore=143.9047;InbreedingCoeff=0.9601;MQ=69.63;MQ0=3;MQRankSum=-2.500;QD=29.64;ReadPosRankSum=6.694;VQSLOD=6.1329;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,53:56:99:1833,144,0	1/1:0,13:13:39.12:497,39,0	0/0:41,0:38:34.62:0,35,1268	0/0:35,0:29:59.94:0,60,953	1/1:1,25:26:60.19:764,60,0	1/1:2,13:15:33.11:420,33,0	1/1:4,24:28:66.21:840,66,0	1/1:9,30:39:90.24:1092,90,0	1/1:1,24:25:63.20:802,63,0	1/1:3,25:28:75.24:953,75,0	1/1:3,29:32:66:840,66,0	1/1:0,16:16:42.13:535,42,0	1/1:4,19:23:53.87:687,54,0	1/1:3,25:28:63.07:802,63,0	1/1:2,19:21:54.17:688,54,0	1/1:3,34:37:84.27:1070,84,0	1/1:4,36:40:99:1299,102,0	1/1:3,19:23:4.28:599,4,0	0/0:31,0:31:78.26:0,78,1279	0/0:21,0:21:54.18:0,54,903	1/1:6,24:30:63.20:802,63,0	1/1:4,25:29:57.18:726,57,0	1/1:1,21:22:38.93:496,39,0	1/1:2,36:38:90.29:1146,90,0	0/0:13,0:13:33.11:0,33,552	1/1:2,18:19:51.14:634,51,0	0/0:25,0:25:60.16:0,60,972	1/1:2,3:5:9.03:115,9,0
chr10	88179015	.	CTT	C	8450.85	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-7.387;DP=606;FS=0.666;HRun=10;HaplotypeScore=123.5384;InbreedingCoeff=0.9763;MQ=66.74;MQ0=2;MQRankSum=-1.043;QD=28.17;ReadPosRankSum=4.163;VQSLOD=4.3705;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,42:44:99:1304,117,0	1/1:0,9:9:24.06:267,24,0	0/0:6,0:6:3.46:0,3,132	0/0:15,0:14:26.23:0,26,324	1/1:1,35:36:93.22:1034,93,0	0/0:3,0:15:32.94:0,33,129	0/0:5,0:18:27.95:0,28,110	0/0:4,0:26:56.74:0,57,248	1/1:2,13:15:36.02:386,36,0	1/1:0,26:26:78.21:869,78,0	1/1:0,27:27:65.91:718,66,0	0/0:2,0:20:32.44:0,32,111	1/1:3,17:20:45.12:502,45,0	0/0:2,0:25:50.15:0,50,209	1/1:3,29:32:66.04:778,66,0	1/1:1,26:27:75.20:836,75,0	1/1:1,19:20:51.13:569,51,0	0/0:2,0:20:37.43:0,37,129	0/0:2,0:14:32.93:0,33,126	0/0:1,0:23:50.68:0,51,192	0/0:1,0:23:49.91:0,50,171	0/0:1,0:23:42.09:0,42,174	1/1:1,13:14:39.01:418,39,0	1/1:2,26:28:69.18:769,69,0	0/0:16,0:16:46.96:0,47,695	0/0:2,0:23:49.31:0,49,176	0/0:2,0:27:54.50:0,54,187	0/0:3,0:12:22.46:0,22,77
chr10	88179192	.	CG	C	6530.71	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=-4.319;DP=443;FS=16.689;HRun=2;HaplotypeScore=96.1704;InbreedingCoeff=0.4754;MQ=61.26;MQ0=17;MQRankSum=-1.431;QD=19.44;ReadPosRankSum=-0.839;VQSLOD=3.4956;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,16:24:56.91:642,57,0	1/1:0,5:5:8.88:115,9,0	0/0:39,1:15:30.16:0,30,319	0/0:47,1:20:12.74:0,13,171	1/1:9,14:22:48.04:552,48,0	0/1:13,0:12:48.76:74,0,49	0/0:6,0:6:12.70:0,13,48	1/1:7,5:12:32.58:318,33,0	1/1:6,6:12:27.08:332,27,0	1/1:0,12:11:30.06:356,30,0	1/1:1,18:19:32.81:293,33,0	0/1:10,0:9:17.44:17,0,33	1/1:3,8:11:18.01:201,18,0	0/1:14,0:14:35.03:82,0,35	1/1:13,5:18:50.83:525,51,0	1/1:4,3:7:21.05:244,21,0	1/1:1,21:21:39.13:497,39,0	0/1:18,0:18:48.46:48,0,62	1/1:1,7:8:23.80:227,24,0	1/1:0,11:11:24.04:291,24,0	1/1:8,7:15:20.40:217,20,0	0/1:15,0:15:14.73:103,0,15	1/1:6,6:12:15.04:169,15,0	1/1:7,6:12:35.30:304,35,0	0/0:11,0:11:32.67:0,33,405	1/1:2,14:16:38.84:425,39,0	1/1:0,16:16:17.82:225,18,0	1/1:7,3:8:23.99:273,24,0
chr10	88179218	.	AAAAG	A	966.25	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=-0.774;DP=459;FS=0.000;HRun=0;HaplotypeScore=124.6973;InbreedingCoeff=0.2346;MQ=60.80;MQ0=10;MQRankSum=-2.089;QD=4.98;ReadPosRankSum=-2.777;VQSLOD=1.8780;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:32.95:458,33,0	0/1:4,0:4:18.37:18,0,39	0/0:21,0:6:10.94:0,11,182	0/0:36,0:17:23.78:0,24,405	0/1:22,0:20:33.91:34,0,128	0/1:18,0:17:10.04:10,0,92	0/1:10,0:10:31.35:31,0,50	1/1:18,0:18:40.40:288,40,0	0/0:13,0:13:16.30:0,16,46	0/1:17,0:17:36.93:37,0,314	0/0:17,0:17:14:0,14,316	0/1:10,0:10:38.36:38,0,50	0/1:3,0:3:5.90:6,0,16	0/0:9,0:9:15.15:0,15,71	0/0:21,0:21:5.28:0,5,88	0/0:6,0:6:7.16:0,7,34	0/1:24,0:23:10.64:11,0,455	0/0:21,0:21:17.44:0,17,120	0/0:18,0:17:47.61:0,48,801	0/0:25,0:25:66.06:0,66,1243	1/1:13,0:13:6.21:36,6,0	0/0:8,0:8:13.93:0,14,78	0/0:18,0:18:2.61:0,3,94	0/0:19,0:18:19.07:0,19,72	0/0:16,0:16:48.05:0,48,1038	1/1:15,0:15:3.67:102,4,0	0/0:17,0:17:35.30:0,35,676	1/1:11,1:10:4.95:70,5,0
chr10	88179219	.	AAAG	A	2255.23	PASS	AB=0.976;AC=33;AF=0.589;AN=56;BaseQRankSum=4.149;DP=456;FS=2.008;HRun=0;HaplotypeScore=112.7774;InbreedingCoeff=0.2398;MQ=62.36;MQ0=8;MQRankSum=-5.878;QD=7.32;ReadPosRankSum=2.532;VQSLOD=2.7545;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:29.43:226,29,0	0/1:4,0:4:20.09:26,0,20	0/0:20,0:6:10.95:0,11,148	0/0:36,0:18:34.46:0,34,374	0/1:21,1:20:72.17:130,0,72	1/1:18,1:18:9.35:189,9,0	1/1:10,0:10:14.81:69,15,0	1/1:4,14:18:42.01:503,42,0	1/1:13,0:13:19.84:69,20,0	0/1:17,0:17:38.67:39,0,204	0/0:17,0:17:9.34:0,9,224	0/1:10,1:11:25.41:80,0,25	1/1:2,1:3:3.04:52,3,0	0/1:9,0:9:25.51:26,0,26	1/1:19,2:21:3.14:152,3,0	1/1:5,0:5:0.94:21,1,0	0/1:25,0:24:49:49,0,259	0/1:20,1:21:37.85:74,0,38	0/0:17,0:16:26.31:0,26,632	0/0:26,0:26:63.61:0,64,1019	1/1:3,10:13:7.45:129,7,0	0/1:8,0:8:17.93:18,0,38	1/1:17,1:18:18.75:121,19,0	0/1:19,1:19:6.27:46,0,6	0/0:16,0:16:41.51:0,42,818	1/1:8,5:13:27.24:303,27,0	0/0:16,0:16:35.32:0,35,590	1/1:3,8:10:11.51:122,12,0
chr10	88179220	.	AAG	A	4488.77	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=3.168;DP=444;FS=0.000;HRun=0;HaplotypeScore=97.8936;InbreedingCoeff=0.6220;MQ=64.20;MQ0=8;MQRankSum=-5.490;QD=14.12;ReadPosRankSum=1.060;VQSLOD=4.6842;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:28.21:175,28,0	0/1:4,0:4:4.90:55,0,5	0/0:18,0:7:10.77:0,11,108	0/0:33,0:17:27.73:0,28,271	1/1:8,13:19:35.98:385,36,0	1/1:11,8:18:39.18:542,39,0	1/1:2,7:9:20.82:223,21,0	1/1:15,0:15:41.84:325,42,0	1/1:1,12:13:23.93:301,24,0	0/1:17,0:17:59.26:59,0,65	0/1:17,0:17:10.25:10,0,82	1/1:9,2:11:10.25:192,10,0	1/1:2,1:3:8.59:69,9,0	1/1:2,7:9:15.05:188,15,0	1/1:7,14:21:33.05:382,33,0	1/1:6,0:6:8.30:62,8,0	0/1:25,0:24:67.87:68,0,98	1/1:6,15:21:26.79:298,27,0	0/0:17,0:16:41.91:0,42,464	0/0:25,0:25:60.05:0,60,788	1/1:12,0:12:8.52:65,9,0	1/1:3,5:8:12.04:150,12,0	1/1:3,15:18:32.84:361,33,0	1/1:7,13:19:23.81:276,24,0	0/0:16,0:16:39.13:0,39,619	1/1:11,0:11:23.90:201,24,0	0/0:16,0:16:35.55:0,36,468	1/1:10,1:10:11.95:102,12,0
chr10	88179221	.	AG	A	2853.14	PASS	AB=0.922;AC=42;AF=0.750;AN=56;BaseQRankSum=6.888;DP=438;FS=3.026;HRun=1;HaplotypeScore=97.2531;InbreedingCoeff=0.7343;MQ=65.93;MQ0=6;MQRankSum=-5.109;QD=9.09;ReadPosRankSum=2.785;VQSLOD=1.5840;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:14.15:109,14,0	1/1:4,0:4:5.94:46,6,0	0/0:18,0:8:13.27:0,13,107	0/0:30,0:17:12.99:0,13,200	0/1:20,1:19:31.78:166,0,32	1/1:17,1:18:50.46:336,50,0	1/1:8,1:9:20.54:143,21,0	1/1:15,0:15:41.12:274,41,0	1/1:12,1:13:23.41:137,23,0	1/1:17,1:18:31.03:192,31,0	1/1:15,1:16:14.14:102,14,0	1/1:10,1:11:23.52:158,24,0	1/1:2,1:3:8.84:71,9,0	1/1:9,0:9:14.64:87,15,0	1/1:20,1:21:16:167,16,0	1/1:1,5:6:8.97:100,9,0	1/1:25,0:24:23.65:179,24,0	1/1:20,0:20:8.96:156,9,0	0/0:17,0:16:31.71:0,32,362	0/0:25,0:25:44.89:0,45,606	1/1:11,1:12:9.18:50,9,0	0/1:7,1:8:4.41:55,0,4	1/1:18,0:18:31.06:176,31,0	1/1:17,2:18:7.68:138,8,0	0/0:17,0:17:45.07:0,45,537	1/1:11,0:11:14.40:138,14,0	0/0:16,0:16:36.04:0,36,395	1/1:10,0:10:11.60:63,12,0
chr10	88179354	.	CTTTCT	C	11853.69	PASS	AB=0.679;AC=43;AF=0.768;AN=56;BaseQRankSum=4.620;DP=456;FS=6.000;HRun=0;HaplotypeScore=122.6279;InbreedingCoeff=0.8718;MQ=63.56;MQ0=5;MQRankSum=-10.467;QD=37.39;ReadPosRankSum=1.595;VQSLOD=4.7438;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,1:21:45.15:769,45,0	1/1:10,0:10:27.07:435,27,0	0/0:17,0:8:13.60:0,14,256	0/0:38,0:22:44.99:0,45,648	1/1:14,23:37:81.27:1446,81,0	1/1:9,0:8:15.05:261,15,0	1/1:12,1:13:36.10:531,36,0	1/1:16,10:26:48.16:840,48,0	1/1:6,4:10:30.10:515,30,0	1/1:14,0:14:30.09:482,30,0	1/1:21,4:24:54.17:925,54,0	1/1:11,1:12:33.11:539,33,0	1/1:3,5:8:15.05:293,15,0	1/1:9,0:9:27.09:455,27,0	1/1:4,3:7:15.05:288,15,0	1/1:6,6:12:27.09:504,27,0	1/1:20,2:22:37.81:725,38,0	1/1:13,1:14:24.08:412,24,0	0/0:23,0:22:39.13:0,39,1089	0/0:22,0:22:48.15:0,48,1249	1/1:7,3:10:15.05:293,15,0	1/1:10,0:10:24.08:419,24,0	1/1:4,7:11:27.09:498,27,0	1/1:6,7:13:21.07:384,21,0	0/0:20,0:20:60.21:0,60,1752	0/1:10,9:18:21.49:685,0,21	0/0:19,0:19:54.16:0,54,1338	1/1:3,2:5:9.03:153,9,0
chr10	88179358	.	CT	C	1012.35	PASS	AB=0.976;AC=25;AF=0.446;AN=56;BaseQRankSum=13.673;DP=444;FS=0.437;HRun=4;HaplotypeScore=130.4672;InbreedingCoeff=-0.1206;MQ=66.02;MQ0=5;MQRankSum=-12.131;QD=3.54;ReadPosRankSum=5.678;VQSLOD=-0.4621;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:16.10:69,16,0	0/1:10,0:10:2.11:2,0,37	0/0:19,0:9:18.53:0,19,236	0/0:42,0:26:17.22:0,17,550	0/1:32,3:35:76.20:157,0,76	0/1:8,0:7:0.03:0,0,66	0/1:12,0:13:5.11:104,0,5	0/1:20,2:22:99:158,0,146	1/1:10,1:11:9.65:112,10,0	0/0:14,0:14:0.57:0,1,47	0/1:22,1:22:9.07:41,0,9	0/1:12,0:12:24.94:25,0,51	0/1:6,0:6:20.04:20,0,27	0/1:9,0:9:1.67:19,0,2	1/1:7,0:7:12.50:54,12,0	0/1:11,0:11:41.55:42,0,60	0/1:20,2:22:20.23:86,0,20	0/1:12,0:12:4.96:5,0,98	0/0:20,0:19:48.16:0,48,658	0/0:20,0:20:51.17:0,51,704	0/1:9,0:9:25.09:52,0,25	0/1:9,0:9:26.74:43,0,27	1/1:9,1:10:21.07:89,21,0	0/1:12,1:13:22.33:22,0,82	0/0:22,0:22:66.22:0,66,922	0/1:17,1:16:49.12:76,0,49	0/0:21,0:21:57.19:0,57,796	0/1:5,0:5:3.45:3,0,44
chr10	88179363	.	CT	C	5690.85	PASS	AB=0.779;AC=29;AF=0.518;AN=56;BaseQRankSum=8.904;DP=460;FS=16.338;HRun=4;HaplotypeScore=122.5356;InbreedingCoeff=-0.0556;MQ=65.95;MQ0=5;MQRankSum=-11.328;QD=18.18;ReadPosRankSum=6.480;VQSLOD=3.4208;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,16:24:29.07:415,0,29	1/1:2,8:10:8.53:281,9,0	0/0:21,0:11:19.58:0,20,288	0/0:42,0:26:26.70:0,27,558	1/1:34,0:34:30.24:583,30,0	0/1:2,6:7:5.51:156,0,6	1/1:4,8:12:34.64:321,35,0	0/1:22,2:24:99:268,0,125	0/1:13,0:13:37.79:186,0,38	0/1:5,7:12:29.25:283,0,29	1/1:10,13:22:16.29:498,16,0	0/1:7,7:14:18.85:320,0,19	1/1:6,0:6:14.97:122,15,0	0/1:3,8:11:16.72:246,0,17	0/1:6,1:7:40.11:119,0,40	0/1:10,2:12:4.83:186,0,5	1/1:10,12:22:11.44:481,11,0	0/1:7,6:13:37.22:225,0,37	0/0:18,0:17:42.14:0,42,576	0/0:19,0:19:51.15:0,51,683	0/1:7,0:7:13.21:86,0,13	0/1:5,7:12:11.02:233,0,11	0/1:12,2:14:91.56:178,0,92	0/1:13,1:14:82.16:154,0,82	0/0:22,0:22:66.22:0,66,924	0/1:15,3:16:39.87:264,0,40	0/0:25,0:25:72.17:0,72,896	1/1:3,0:3:9:84,9,0
chr10	88179374	.	TTA	T	4321.74	PASS	AB=0.957;AC=36;AF=0.643;AN=56;BaseQRankSum=10.713;DP=461;FS=9.899;HRun=0;HaplotypeScore=136.2537;InbreedingCoeff=-0.0763;MQ=66.11;MQ0=4;MQRankSum=-11.121;QD=10.89;ReadPosRankSum=2.591;VQSLOD=4.2486;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,15:22:27.27:498,27,0	1/1:2,8:10:15.85:337,16,0	0/0:16,0:8:17.64:0,18,210	0/1:38,0:25:6.44:6,0,497	0/1:32,0:32:45.33:171,0,45	1/1:5,5:9:15.54:275,16,0	1/1:8,6:14:13.05:266,13,0	0/1:27,0:27:55.99:56,0,206	0/1:12,0:12:45.76:46,0,52	0/1:9,6:15:2.69:334,0,3	1/1:10,12:21:35.77:459,36,0	1/1:9,7:16:12.05:331,12,0	1/1:6,0:6:9.45:75,9,0	1/1:7,7:14:18:305,18,0	0/1:10,0:10:8.82:9,0,70	0/1:12,0:12:59.48:59,0,92	0/1:10,9:20:24.10:292,0,24	1/1:7,5:12:6.79:186,7,0	0/1:18,0:17:30.96:31,0,305	0/1:22,0:22:86.09:86,0,343	0/1:6,0:6:13.15:38,0,13	1/1:6,6:12:14.83:252,15,0	0/1:14,0:14:40.05:40,0,127	0/1:15,0:15:65.77:76,0,66	0/0:24,0:24:72.22:0,72,1190	0/1:15,0:13:67:67,0,67	0/0:24,0:24:48.34:0,48,425	1/1:2,0:2:5.64:27,6,0
chr10	88179376	.	A	AT	6004.94	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=5.190;DP=471;FS=2.275;HRun=8;HaplotypeScore=127.9478;InbreedingCoeff=0.9021;MQ=65.49;MQ0=4;MQRankSum=-5.309;QD=15.24;ReadPosRankSum=-0.579;VQSLOD=3.9236;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:23:47.56:200,48,0	1/1:8,0:10:25.76:120,26,0	0/0:16,0:8:17.02:0,17,127	0/0:36,0:24:18.98:0,19,254	1/1:2,31:33:65.59:653,66,0	1/1:8,0:9:21.64:89,22,0	1/1:9,0:15:20.51:87,21,0	1/1:5,25:30:72.18:808,72,0	1/1:0,10:10:27.01:293,27,0	1/1:9,0:18:43.64:211,44,0	1/1:19,0:20:32.93:147,33,0	1/1:8,0:17:25.44:113,25,0	1/1:2,4:6:15.04:171,15,0	1/1:9,0:14:20.10:83,20,0	1/1:1,10:11:21.06:242,21,0	1/1:4,8:12:2.59:269,3,0	1/1:14,0:19:25.43:120,25,0	1/1:7,0:12:22.84:98,23,0	1/1:2,1:20:49.28:277,49,0	1/1:4,0:22:50.47:265,50,0	1/1:1,5:6:15.04:172,15,0	1/1:7,0:12:28.10:128,28,0	1/1:0,15:15:39.03:430,39,0	1/1:2,13:15:24.03:259,24,0	0/0:25,0:25:69.01:0,69,620	1/1:3,11:13:38.85:398,39,0	1/1:4,0:24:48.01:254,48,0	1/1:2,2:4:12:116,12,0
chr10	88180285	.	A	ATTT	8020.49	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-1.789;DP=529;FS=20.845;HRun=13;HaplotypeScore=94.7256;InbreedingCoeff=0.6439;MQ=69.90;MQ0=0;MQRankSum=-3.021;QD=16.04;ReadPosRankSum=-1.088;VQSLOD=1.5775;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,16:31:16.58:238,17,0	1/1:2,9:12:13.27:187,13,0	0/0:15,0:12:16.72:0,17,148	0/0:12,0:11:5.86:0,6,52	1/1:4,10:18:35.11:428,35,0	1/1:7,8:21:21.05:310,21,0	1/1:14,5:22:18:231,18,0	1/1:8,0:24:15.01:317,15,0	1/1:11,0:11:9.02:119,9,0	1/1:9,9:21:36.06:506,36,0	1/1:3,13:21:45:611,45,0	1/1:6,4:14:15.05:233,15,0	1/1:9,9:19:21.94:334,22,0	1/1:7,7:14:14.05:153,14,0	1/1:13,9:24:16.25:191,16,0	1/1:6,9:17:14.92:183,15,0	1/1:6,20:32:60.18:981,60,0	1/1:9,9:21:30.08:476,30,0	1/1:10,8:19:33.07:493,33,0	1/1:5,9:17:28.23:318,28,0	1/1:5,0:22:20.42:143,20,0	1/1:7,1:14:23.06:271,23,0	1/1:5,5:12:9.48:128,9,0	1/1:1,12:16:24.02:336,24,0	0/1:18,0:19:15.70:16,0,258	1/1:2,2:22:49.13:448,49,0	1/1:6,3:22:19.24:233,19,0	1/1:5,0:13:17.93:137,18,0
chr10	88180583	.	A	AGTGTGTGT	5703.79	PASS	AB=0.859;AC=34;AF=0.680;AN=50;BaseQRankSum=-6.080;DP=691;FS=0.000;HRun=0;HaplotypeScore=186.8278;InbreedingCoeff=0.5164;MQ=53.41;MQ0=16;MQRankSum=-5.766;QD=11.18;ReadPosRankSum=-1.802;VQSLOD=3.0972;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:36:4.86:81,5,0	./.	0/1:41,0:12:5.10:5,0,53	0/1:61,0:23:1.80:2,0,84	1/1:15,0:14:3.01:50,3,0	1/1:8,7:18:4.32:245,4,0	1/1:21,13:36:13.77:494,14,0	0/1:17,0:27:29.31:171,0,29	1/1:16,9:27:12.04:451,12,0	0/0:6,0:16:17.55:0,18,288	./.	1/1:9,9:21:5.94:235,6,0	1/1:8,9:23:17.69:628,18,0	1/1:9,12:23:8.17:369,8,0	1/1:13,11:29:11.70:490,12,0	1/1:16,11:30:20.51:828,21,0	0/0:8,0:19:9.01:0,9,115	1/1:9,5:16:2.54:123,3,0	1/1:23,0:23:30.29:575,30,0	1/1:12,0:12:5.94:41,6,0	0/0:38,0:72:81.36:0,81,902	0/0:5,7:16:0.47:0,0,1	./.	1/1:17,6:24:5.46:247,5,0	0/0:22,0:22:29.62:0,30,587	0/1:12,0:21:1.61:2,0,203	1/1:15,1:24:20.69:666,21,0	0/0:6,0:15:23.43:0,23,246
chr10	88180787	.	C	CATAAGTCTGTGGTACC	21981.72	PASS	AB=0.767;AC=54;AF=0.964;AN=56;BaseQRankSum=0.476;DP=237;FS=40.343;HRun=0;HaplotypeScore=274.0604;InbreedingCoeff=-0.0725;MQ=65.13;MQ0=3;MQRankSum=-3.489;QD=92.75;ReadPosRankSum=2.189;VQSLOD=3.3262;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:33.11:1786,33,0	1/1:8,0:8:18.06:933,18,0	0/1:4,0:7:32.69:523,0,33	0/1:4,1:5:39.56:445,0,40	1/1:10,0:10:21.03:744,21,0	1/1:11,0:11:24.06:1437,24,0	1/1:14,0:14:33.11:1765,33,0	1/1:8,0:8:24.08:891,24,0	1/1:4,0:4:3.01:57,3,0	1/1:13,0:13:36.11:1736,36,0	1/1:9,0:9:24.08:892,24,0	1/1:6,0:6:6:228,6,0	1/1:5,0:5:3.01:57,3,0	1/1:9,0:9:21.07:1027,21,0	1/1:6,0:6:9.03:486,9,0	1/1:11,0:11:15.01:670,15,0	1/1:7,0:7:15.05:710,15,0	1/1:6,0:5:9.03:623,9,0	1/1:8,0:8:20.86:1143,21,0	1/1:11,0:11:30.07:1120,30,0	1/1:6,0:6:15.04:553,15,0	1/1:12,0:12:27.09:1206,27,0	1/1:9,0:8:12.04:637,12,0	1/1:9,0:8:15.05:706,15,0	1/1:6,0:6:9.03:212,9,0	1/1:7,0:7:9.92:460,10,0	1/1:5,0:5:12.04:597,12,0	1/1:6,0:6:6.02:342,6,0
chr10	88182890	.	CA	C	4664.55	PASS	AB=0.971;AC=54;AF=0.964;AN=56;BaseQRankSum=0.378;DP=433;FS=1.565;HRun=2;HaplotypeScore=122.2053;InbreedingCoeff=-0.0438;MQ=79.73;MQ0=0;MQRankSum=-2.461;QD=10.77;ReadPosRankSum=4.851;VQSLOD=3.2180;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:79.35:416,79,0	1/1:0,4:4:11.21:53,11,0	0/1:15,0:16:20.32:72,0,20	0/1:14,0:14:14.15:111,0,14	1/1:0,13:13:16.30:132,16,0	1/1:1,17:18:12.80:164,13,0	1/1:0,21:21:43.23:183,43,0	1/1:0,18:18:49.26:226,49,0	1/1:1,17:18:44.61:214,45,0	1/1:1,15:16:28.03:171,28,0	1/1:0,5:5:8.09:34,8,0	1/1:0,16:16:44.27:211,44,0	1/1:1,10:11:25.46:134,25,0	1/1:1,8:9:20.84:94,21,0	1/1:0,15:15:30.22:139,30,0	1/1:1,9:10:21.05:95,21,0	1/1:1,19:20:45.44:242,45,0	1/1:1,22:23:34.93:237,35,0	1/1:1,19:20:27.08:223,27,0	1/1:0,14:14:39.50:221,39,0	1/1:1,34:35:78.80:399,79,0	1/1:0,6:6:13.72:60,14,0	1/1:0,9:9:21.96:96,22,0	1/1:1,25:26:60.56:308,61,0	1/1:0,8:8:16.32:70,16,0	1/1:1,14:15:15.94:159,16,0	1/1:0,13:13:24.93:113,25,0	1/1:0,7:7:19.37:87,19,0
chr10	88183067	.	CTTTT	C	4112.37	PASS	AB=0.660;AC=28;AF=0.500;AN=56;BaseQRankSum=3.708;DP=602;FS=6.437;HRun=16;HaplotypeScore=115.7489;InbreedingCoeff=0.8252;MQ=69.82;MQ0=5;MQRankSum=-2.253;QD=13.06;ReadPosRankSum=5.941;VQSLOD=0.3649;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,2:33:26.74:132,27,0	1/1:0,0:5:14.81:108,15,0	0/0:43,0:23:8.71:0,9,350	0/0:16,0:5:11.93:0,12,139	1/1:7,14:23:40.02:436,40,0	0/0:15,0:24:56.91:0,57,697	0/0:6,0:19:30.08:0,30,359	0/1:18,0:31:32.51:33,0,107	1/1:9,16:25:35.91:473,36,0	1/1:6,1:27:57.88:448,58,0	1/1:4,0:12:23.83:188,24,0	0/0:16,0:28:44.64:0,45,605	1/1:9,12:22:26.80:355,27,0	0/0:3,0:22:38.95:0,39,466	1/1:9,20:30:49.65:611,50,0	1/1:4,11:16:28.24:358,28,0	1/1:4,0:19:23.84:188,24,0	0/0:18,0:29:75.79:0,76,1013	0/0:10,0:20:30.27:0,30,612	0/0:8,0:10:21.07:0,21,328	1/1:8,0:13:5.19:14,5,0	0/0:9,0:19:36.05:0,36,408	1/1:6,9:15:20.79:256,21,0	1/1:4,15:20:38.30:496,38,0	0/0:16,0:16:43.93:0,44,741	0/1:9,0:23:16.11:16,0,19	0/0:18,0:27:59.99:0,60,715	0/0:2,0:11:18.75:0,19,143
chr10	88184164	.	G	GA	9547.10	PASS	AB=0.923;AC=39;AF=0.696;AN=56;BaseQRankSum=-11.830;DP=479;FS=1.818;HRun=9;HaplotypeScore=57.6273;InbreedingCoeff=0.9160;MQ=80.82;MQ0=0;MQRankSum=-0.501;QD=27.28;ReadPosRankSum=0.100;VQSLOD=4.9732;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:36:99:1108,102,0	1/1:1,12:13:33.09:365,33,0	0/0:19,0:19:17.15:0,17,173	0/1:11,0:12:8.35:8,0,100	1/1:6,25:31:52.12:783,52,0	0/0:18,0:19:53.03:0,53,448	0/0:15,0:15:38.97:0,39,334	1/1:3,22:25:66.11:692,66,0	1/1:0,9:9:24.06:265,24,0	1/1:4,13:17:32.17:422,32,0	1/1:2,21:23:60.16:664,60,0	0/0:13,0:13:29.96:0,30,257	1/1:1,14:15:39.11:432,39,0	0/0:10,0:10:26.99:0,27,234	1/1:0,14:14:36.10:398,36,0	1/1:2,8:10:24.06:265,24,0	1/1:4,22:27:53.98:578,54,0	0/0:18,0:18:47.99:0,48,417	1/1:0,23:23:69.16:747,69,0	1/1:1,22:23:66.14:716,66,0	1/1:0,5:5:15.04:166,15,0	0/0:9,0:9:23.99:0,24,206	1/1:2,10:12:27.07:299,27,0	1/1:0,4:4:12.03:133,12,0	0/0:26,0:25:77.96:0,78,672	1/1:1,17:18:51.14:564,51,0	1/1:1,20:22:60:644,60,0	1/1:2,9:11:27.07:299,27,0
chr10	88184556	.	G	GT	6803.14	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-11.738;DP=647;FS=0.316;HRun=8;HaplotypeScore=66.2075;InbreedingCoeff=0.9978;MQ=85.24;MQ0=0;MQRankSum=-0.220;QD=28.71;ReadPosRankSum=2.733;VQSLOD=5.1448;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:96.02:0,96,868	1/1:1,6:7:18.04:197,18,0	0/0:27,0:26:36.90:0,37,422	0/0:30,1:29:21.16:0,21,283	1/1:2,29:31:93.11:1019,93,0	0/0:31,0:31:84.04:0,84,768	0/0:30,0:30:80.95:0,81,719	0/0:33,0:33:67.69:0,68,544	1/1:3,25:28:72.21:831,72,0	1/1:7,13:20:42.11:469,42,0	1/1:2,19:21:32.61:599,33,0	0/0:19,0:19:54.01:0,54,489	1/1:3,25:28:66.20:762,66,0	0/0:15,0:15:42.01:0,42,379	1/1:0,14:14:39.12:450,39,0	1/1:0,16:16:45.13:519,45,0	1/1:2,29:31:55.88:843,56,0	0/0:29,0:29:74.98:0,75,679	0/0:16,0:16:38.82:0,39,320	0/0:11,0:11:30.01:0,30,274	0/0:24,0:26:49.45:0,49,588	0/0:15,0:15:44.39:0,44,393	1/1:1,18:19:51.15:588,51,0	1/1:3,19:22:23.77:526,24,0	0/0:19,0:19:48.01:0,48,434	0/0:28,1:29:46.43:0,46,679	0/0:25,0:25:72:0,72,649	0/0:19,0:19:51.02:0,51,466
chr10	88185067	.	A	AT	2293.20	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-1.175;DP=572;FS=0.000;HRun=8;HaplotypeScore=91.4647;InbreedingCoeff=0.8367;MQ=68.45;MQ0=1;MQRankSum=-1.203;QD=24.66;ReadPosRankSum=-3.645;VQSLOD=2.3567;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:42:0,42,378	0/0:9,0:9:23.98:0,24,216	0/0:14,0:11:26.03:0,26,201	0/1:9,0:8:15.58:16,0,68	0/0:25,0:25:72.03:0,72,653	0/0:24,0:24:63.03:0,63,576	0/0:23,0:23:63.01:0,63,571	0/0:34,0:34:90:0,90,809	0/0:17,0:17:51.03:0,51,466	0/0:28,0:28:81.04:0,81,738	0/0:20,0:20:60.02:0,60,545	0/0:21,0:21:50.99:0,51,457	0/0:21,0:21:54.01:0,54,494	0/0:8,0:8:23.99:0,24,214	0/0:17,0:17:42:0,42,384	0/0:12,0:12:36.01:0,36,325	0/0:32,0:33:83.06:0,83,741	0/0:16,0:16:38.99:0,39,351	1/1:8,10:18:45.10:490,45,0	1/1:10,23:33:84.23:952,84,0	0/0:6,0:6:18.01:0,18,164	0/0:21,0:21:57.03:0,57,521	0/0:21,0:21:56.99:0,57,512	0/0:13,0:13:39.01:0,39,353	0/0:21,0:21:63.03:0,63,576	0/0:40,0:40:99:0,102,925	1/1:10,23:33:87.24:984,87,0	0/0:18,0:18:32.98:0,33,302
chr10	88185119	.	G	GA	13952.08	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-3.883;DP=565;FS=15.923;HRun=9;HaplotypeScore=76.0812;InbreedingCoeff=0.8059;MQ=74.46;MQ0=0;MQRankSum=-3.894;QD=25.74;ReadPosRankSum=2.243;VQSLOD=3.9399;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:42.11:464,42,0	1/1:1,6:8:20.89:213,21,0	0/0:8,0:8:14.47:0,14,107	0/1:13,0:13:6.43:6,0,62	1/1:1,30:31:74.96:749,75,0	1/1:3,12:15:36.10:398,36,0	1/1:1,17:18:45.12:498,45,0	1/1:5,14:19:39.09:422,39,0	1/1:3,16:19:48.13:531,48,0	1/1:11,22:33:66.13:716,66,0	1/1:2,17:19:51.04:536,51,0	1/1:0,17:17:42.11:465,42,0	1/1:2,18:20:51.14:564,51,0	1/1:3,12:15:42.10:456,42,0	1/1:2,19:21:48.13:531,48,0	1/1:0,14:14:36.10:398,36,0	1/1:4,22:26:54.15:597,54,0	1/1:2,13:15:36.10:398,36,0	1/1:7,11:18:13:352,13,0	1/1:4,31:36:95.94:990,96,0	1/1:4,9:13:21.06:232,21,0	1/1:2,16:18:48.09:517,48,0	1/1:2,22:24:60.16:664,60,0	1/1:1,8:9:24.06:266,24,0	0/0:15,0:15:29.96:0,30,260	1/1:4,36:40:99:1195,108,0	1/1:7,35:42:82.84:1096,83,0	1/1:0,23:23:63.17:697,63,0
chr10	88185649	.	A	AG	4351.35	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.203;DP=657;FS=2.821;HRun=3;HaplotypeScore=80.5188;InbreedingCoeff=0.9983;MQ=86.40;MQ0=0;MQRankSum=-0.647;QD=33.73;ReadPosRankSum=0.628;VQSLOD=5.3521;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,187,2139	0/0:9,0:9:24.07:0,24,288	0/0:23,0:23:66.15:0,66,734	0/0:21,0:21:40.15:0,40,487	0/0:17,0:17:48.13:0,48,561	1/1:0,24:24:57.19:798,57,0	1/1:0,20:20:57.19:798,57,0	0/0:31,0:31:87.26:0,87,1035	0/0:27,0:27:75.23:0,75,899	0/0:22,0:22:60.18:0,60,718	0/0:9,0:9:21.05:0,21,240	1/1:0,28:28:75.25:1048,75,0	0/0:21,0:21:60.18:0,60,720	1/1:1,11:12:27.09:378,27,0	0/0:26,0:26:75.23:0,75,899	0/0:23,0:23:66.16:0,66,766	0/0:30,0:30:81.21:0,81,946	1/1:5,21:26:54.18:756,54,0	0/0:18,0:18:48.10:0,48,551	0/0:9,0:9:27.08:0,27,324	0/0:43,0:43:99:0,123,1422	1/1:3,16:19:42.14:573,42,0	0/0:15,0:15:38.85:0,39,443	0/0:31,0:31:93.21:0,93,1074	0/0:17,0:17:48.15:0,48,576	0/0:27,0:27:66.67:0,67,878	0/0:27,0:27:75.08:0,75,842	0/0:19,0:19:57.17:0,57,684
chr10	88187622	.	GGTGT	G	1405.34	PASS	AB=0.905;AC=34;AF=0.680;AN=50;BaseQRankSum=0.023;DP=599;FS=3.308;HRun=0;HaplotypeScore=119.1055;InbreedingCoeff=0.1517;MQ=56.15;MQ0=3;MQRankSum=1.176;QD=3.00;ReadPosRankSum=1.846;VQSLOD=2.3206;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:53,1:56:61.35:61,0,98	1/1:5,0:6:5.75:40,6,0	./.	./.	0/1:11,6:18:0.01:0,0,0	1/1:18,0:18:5.85:84,6,0	1/1:27,10:38:18:213,18,0	0/1:24,0:24:0:0,0,0	1/1:11,8:20:15.04:212,15,0	0/1:22,1:23:27.63:44,0,28	0/1:15,1:16:11.83:48,0,12	1/1:9,4:13:6.02:93,6,0	1/1:10,6:16:5.14:91,5,0	1/1:8,3:11:6.02:91,6,0	1/1:21,4:24:3.01:47,3,0	1/1:9,2:11:3.01:47,3,0	0/1:21,1:37:48.83:49,0,90	1/1:14,1:15:2.97:47,3,0	0/0:16,0:16:8.99:0,9,87	0/0:7,0:7:9:0,9,107	0/1:40,0:39:43.65:69,0,44	1/1:15,3:18:3.01:47,3,0	1/1:8,3:11:3.01:47,3,0	1/1:22,8:30:11.40:186,11,0	0/0:17,0:18:14.79:0,15,221	0/1:20,0:20:17.65:40,0,18	0/0:16,0:16:6.91:0,7,144	./.
chr10	88188074	.	CTACTT	C	17146.16	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=4.443;DP=510;FS=6.565;HRun=0;HaplotypeScore=120.3426;InbreedingCoeff=0.9967;MQ=79.42;MQ0=0;MQRankSum=-8.573;QD=49.70;ReadPosRankSum=4.797;VQSLOD=4.9759;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:66.23:1405,66,0	1/1:1,11:12:33.11:703,33,0	0/0:16,0:16:39.13:0,39,1122	0/0:16,0:16:39.11:0,39,1046	1/1:2,20:22:36.12:766,36,0	0/0:23,0:23:60.14:0,60,1668	0/0:20,0:20:57.20:0,57,1786	1/1:4,21:26:66.23:1392,66,0	1/1:1,15:16:42.14:894,42,0	1/1:2,19:21:57.20:1214,57,0	1/1:0,13:13:27.09:575,27,0	0/0:21,0:21:57.15:0,57,1610	1/1:3,19:22:51.18:1085,51,0	0/0:12,0:12:33.11:0,33,1014	1/1:1,12:13:27.09:575,27,0	1/1:1,14:15:42.14:894,42,0	1/1:0,30:30:72.25:1534,72,0	0/0:24,0:24:66.23:0,66,2053	1/1:3,4:7:15.05:318,15,0	1/1:0,11:11:30.10:639,30,0	1/1:3,21:24:48.16:1022,48,0	0/0:16,0:16:48.16:0,48,1493	1/1:0,19:19:32.65:702,33,0	1/1:2,17:19:42.14:895,42,0	0/0:17,0:17:51.16:0,51,1527	1/1:1,21:22:63.19:1263,63,0	1/1:1,12:13:27.09:575,27,0	1/1:0,12:12:33.11:692,33,0
chr10	88188286	.	ATGTG	A	4415.98	PASS	AB=0.715;AC=41;AF=0.820;AN=50;BaseQRankSum=3.892;DP=596;FS=2.319;HRun=0;HaplotypeScore=140.8870;InbreedingCoeff=0.4841;MQ=61.27;MQ0=7;MQRankSum=-3.910;QD=9.42;ReadPosRankSum=1.905;VQSLOD=4.4325;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:37:8.97:75,9,0	0/1:5,1:10:32.56:33,0,57	./.	./.	1/1:15,7:26:14.55:304,15,0	1/1:13,0:22:26.53:259,27,0	1/1:14,0:21:18.02:167,18,0	./.	1/1:7,7:15:21.06:310,21,0	0/0:18,0:23:21.13:0,21,163	0/0:7,0:14:16.47:0,16,73	1/1:9,0:16:15.01:137,15,0	1/1:8,8:17:18.05:263,18,0	1/1:11,0:23:24.01:218,24,0	1/1:12,9:22:18.05:263,18,0	1/1:5,13:19:30.09:433,30,0	0/1:15,5:25:99:245,0,125	0/1:17,0:23:95.30:115,0,95	1/1:16,0:20:9.01:84,9,0	1/1:17,0:36:45.05:418,45,0	1/1:8,0:9:3:28,3,0	1/1:14,0:25:21.02:196,21,0	1/1:9,6:16:11.84:169,12,0	1/1:22,8:30:25.63:453,26,0	0/0:20,0:22:29.74:0,30,481	1/1:15,0:29:9.01:84,9,0	1/1:10,0:19:11.87:106,12,0	1/1:4,0:6:6.01:56,6,0
chr10	88188875	.	A	AT	17241.80	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-7.429;DP=663;FS=6.403;HRun=5;HaplotypeScore=71.4935;InbreedingCoeff=0.9965;MQ=89.21;MQ0=1;MQRankSum=-7.753;QD=31.93;ReadPosRankSum=3.220;VQSLOD=5.5674;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,1226	1/1:0,9:9:21.07:276,21,0	0/0:28,0:26:37.32:0,37,592	0/0:33,0:29:39.78:0,40,591	1/1:1,20:21:54.06:664,54,0	1/1:2,15:17:45.11:573,45,0	1/1:4,27:31:60.20:789,60,0	1/1:4,30:34:90.26:1142,90,0	1/1:2,27:29:72.23:947,72,0	1/1:1,25:26:75.20:932,75,0	1/1:1,14:15:42.14:551,42,0	1/1:3,24:27:66.21:866,66,0	1/1:0,18:18:45.14:592,45,0	1/1:0,21:21:54.18:710,54,0	1/1:1,24:25:63.20:829,63,0	1/1:0,19:19:45.15:592,45,0	1/1:2,21:23:51.17:671,51,0	1/1:0,13:13:33.11:432,33,0	1/1:5,17:22:51.13:641,51,0	1/1:2,23:25:60.12:751,60,0	1/1:1,27:28:75.24:986,75,0	1/1:1,15:16:36.12:474,36,0	1/1:3,24:27:75.24:979,75,0	1/1:1,25:26:48.16:632,48,0	0/0:21,0:21:57.14:0,57,612	1/1:2,31:33:92.97:1191,93,0	1/1:3,26:29:60.20:788,60,0	1/1:0,6:6:18.06:237,18,0
chr10	88189753	.	TAAGCTGTGTCTTTGCGCATGCCTGTCAGGC	T	2574.10	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=6.260;DP=606;FS=4.712;HRun=0;HaplotypeScore=437.9643;InbreedingCoeff=0.8738;MQ=88.07;MQ0=0;MQRankSum=-3.630;QD=12.32;ReadPosRankSum=2.633;VQSLOD=0.2480;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:72.06:0,72,3461	1/1:9,0:9:8.84:112,9,0	0/0:27,0:27:9:0,9,82	0/0:26,0:26:4.04:0,4,16	0/0:14,1:15:2.96:0,3,7	0/0:21,0:21:36.01:0,36,1633	0/0:23,0:23:45.05:0,45,1281	0/0:35,0:35:30.03:0,30,280	1/1:13,0:13:17.94:176,18,0	1/1:14,4:18:24.02:332,24,0	1/1:7,0:7:0.89:2,1,0	0/0:31,0:31:54.09:0,54,2979	1/1:10,0:10:11.98:128,12,0	0/0:29,0:29:51.04:0,51,2476	1/1:24,0:24:32.94:389,33,0	1/1:16,0:16:21.06:360,21,0	1/1:33,0:33:44.83:496,45,0	0/0:28,0:28:60.14:0,60,4415	1/1:31,0:31:15.01:219,15,0	1/1:12,0:12:10.20:104,10,0	0/0:65,0:64:99:0,129,7517	0/0:13,0:13:12.03:0,12,712	1/1:4,0:4:3:26,3,0	1/1:18,0:18:20.97:223,21,0	0/0:11,0:11:27.03:0,27,507	0/0:21,0:21:36.08:0,36,1044	1/1:14,0:14:17.98:220,18,0	0/0:16,0:16:27.04:0,27,818
chr10	88189980	.	TC	T	8671.83	PASS	AB=0.895;AC=31;AF=0.554;AN=56;BaseQRankSum=-1.215;DP=654;FS=35.130;HRun=10;HaplotypeScore=103.0306;InbreedingCoeff=0.8649;MQ=69.01;MQ0=0;MQRankSum=0.659;QD=20.12;ReadPosRankSum=3.890;VQSLOD=3.4606;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,28:40:79.98:683,80,0	1/1:1,10:11:26.99:234,27,0	0/0:21,0:23:13.40:0,13,216	0/0:16,0:13:5.57:0,6,117	0/0:11,0:15:17.23:0,17,104	1/1:1,22:23:62.99:547,63,0	1/1:3,33:36:89.97:781,90,0	1/1:5,17:22:50.96:438,51,0	0/0:7,0:16:5.87:0,6,39	1/1:4,32:36:99:884,102,0	1/1:2,27:29:80.88:693,81,0	1/1:2,33:36:74.02:631,74,0	0/0:3,0:5:2.84:0,3,14	1/1:1,16:17:38.99:339,39,0	0/0:5,0:18:28.52:0,29,161	0/0:3,0:18:19.92:0,20,100	1/1:5,21:27:59.02:501,59,0	1/1:2,32:34:86.86:744,87,0	0/1:15,2:17:15.98:16,0,294	0/0:29,0:29:69.18:0,69,759	1/1:3,21:24:20.80:410,21,0	1/1:6,24:30:71.98:625,72,0	0/0:10,0:18:23:0,23,129	0/0:9,0:20:19.92:0,20,100	0/0:14,0:14:16.14:0,16,389	1/1:2,32:34:93.45:808,93,0	0/0:29,1:30:52.13:0,52,783	1/1:1,14:15:38.99:338,39,0
chr10	88190112	.	AGTGTGTGTGTGTGTGCATGTGTGAGT	A	2192.81	PASS	AB=0.991;AC=18;AF=0.333;AN=54;BaseQRankSum=-2.117;DP=826;FS=5.897;HRun=0;HaplotypeScore=366.7815;InbreedingCoeff=0.3983;MQ=47.13;MQ0=45;MQRankSum=-1.303;QD=7.31;ReadPosRankSum=1.848;VQSLOD=0.9491;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:2.60:0,3,10	1/1:9,0:9:0.89:2,1,0	0/0:84,0:20:29.57:0,30,791	0/0:80,0:29:35.99:0,36,819	0/1:23,0:23:0:0,0,0	1/1:5,22:27:3.01:177,3,0	1/1:15,0:20:9.02:176,9,0	0/0:22,0:21:36.63:0,37,320	0/0:20,0:19:2.84:0,3,14	0/0:26,0:24:50.98:0,51,1349	./.	1/1:4,23:28:9.08:591,9,0	0/0:18,0:18:4.74:0,5,74	1/1:4,16:20:17.94:984,18,0	0/1:22,0:22:12.43:12,0,62	0/0:22,0:22:14.20:0,14,71	0/0:33,0:34:22.04:0,22,675	0/1:13,0:17:23:238,0,23	0/0:22,0:13:20.35:0,20,130	0/1:28,0:28:7.37:28,0,7	0/0:67,0:64:2.90:0,3,22	1/1:8,18:26:2.99:89,3,0	0/0:10,0:10:5.60:0,6,30	0/1:47,0:47:0:0,0,0	0/0:23,0:23:63.22:0,63,4240	0/1:32,0:31:49.84:50,0,309	0/0:39,0:39:36.54:0,37,211	0/0:11,0:11:17.17:0,17,92
chr10	88190118	.	TGTGTGTGTGCATGTGTGA	T	7398.52	PASS	AB=0.991;AC=43;AF=0.768;AN=56;BaseQRankSum=5.209;DP=833;FS=5.326;HRun=0;HaplotypeScore=271.4014;InbreedingCoeff=0.3346;MQ=45.44;MQ0=48;MQRankSum=-1.087;QD=11.54;ReadPosRankSum=2.253;VQSLOD=2.9397;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:38:2.97:20,3,0	1/1:9,0:9:3.01:39,3,0	0/0:88,0:17:29.45:0,29,624	0/0:78,0:21:19.79:0,20,594	0/1:22,1:23:0:1,0,0	1/1:29,0:28:5.98:119,6,0	0/1:21,0:21:25.31:41,0,25	1/1:24,0:23:33.69:523,34,0	1/1:19,0:18:3.01:91,3,0	0/1:28,0:26:99:191,0,347	0/1:7,0:7:0:0,0,0	1/1:28,0:28:9.18:378,9,0	1/1:17,2:18:19.76:583,20,0	1/1:18,0:18:21.06:548,21,0	1/1:20,1:21:11.95:391,12,0	1/1:23,0:23:15.05:453,15,0	0/1:29,0:29:26.74:27,0,166	0/1:17,0:17:43.07:135,0,43	1/1:24,0:15:8.84:312,9,0	1/1:25,4:29:8.19:379,8,0	1/1:69,0:65:2.98:21,3,0	1/1:26,0:25:2.50:9,2,0	1/1:11,0:11:9.42:197,9,0	0/1:42,1:43:0.02:0,0,0	0/0:25,0:25:66.23:0,66,3901	1/1:33,0:32:66.44:1258,66,0	1/1:41,0:41:39.60:1144,40,0	1/1:12,0:12:18.06:539,18,0
chr10	88190120	.	TGTGTGTGCATGTGTGA	T	10185.60	PASS	AB=0.920;AC=40;AF=0.714;AN=56;BaseQRankSum=5.207;DP=826;FS=1.854;HRun=0;HaplotypeScore=245.1155;InbreedingCoeff=0.3407;MQ=44.46;MQ0=48;MQRankSum=-1.698;QD=17.96;ReadPosRankSum=2.856;VQSLOD=3.6219;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:39:2.80:13,3,0	1/1:9,0:9:3.01:38,3,0	0/0:86,0:14:29.45:0,29,617	0/0:78,0:20:22.86:0,23,618	0/1:2,23:25:0:0,0,0	1/1:28,0:27:6.45:105,6,0	0/1:21,0:21:24.79:25,0,110	1/1:7,16:22:24.23:839,24,0	1/1:8,11:18:3.01:138,3,0	0/1:28,0:26:99:338,0,121	0/1:7,0:7:0:0,0,0	1/1:27,0:27:8.81:336,9,0	1/1:5,14:18:20.60:807,21,0	1/1:18,0:18:20.93:464,21,0	1/1:4,18:22:11.59:497,12,0	1/1:3,19:22:15.05:687,15,0	0/1:29,0:29:56.83:57,0,73	0/1:17,0:17:99:149,0,143	1/1:14,9:14:0:589,0,0	1/1:6,23:29:8.01:356,8,0	1/1:20,45:62:3.01:61,3,0	0/0:26,0:25:2.90:0,3,16	1/1:4,7:11:9.39:290,9,0	0/0:11,31:42:0.22:0,0,1	0/0:26,0:26:69.24:0,69,3768	1/1:6,27:32:71.22:1794,71,0	1/1:3,38:41:42.61:1785,43,0	1/1:2,10:12:18.06:820,18,0
chr10	88190122	.	TGTGTGCATGTGTGA	T	8348.34	PASS	AB=0.994;AC=42;AF=0.750;AN=56;BaseQRankSum=8.867;DP=814;FS=2.617;HRun=0;HaplotypeScore=231.8867;InbreedingCoeff=0.4297;MQ=43.23;MQ0=49;MQRankSum=-2.797;QD=14.05;ReadPosRankSum=5.164;VQSLOD=3.3728;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:40,1:41:3.01:40,3,0	1/1:8,0:8:3.01:38,3,0	0/0:86,0:13:32.45:0,32,625	0/0:81,0:21:25.85:0,26,684	0/1:24,1:25:0:0,0,0	1/1:27,0:26:6.45:91,6,0	0/1:21,0:21:15.72:16,0,193	1/1:22,0:21:10.88:641,11,0	1/1:17,1:17:3.01:103,3,0	1/1:26,1:25:49.66:552,50,0	0/1:7,0:7:0:0,0,0	1/1:26,0:26:8.81:294,9,0	1/1:18,1:18:20.72:666,21,0	1/1:17,0:17:18.16:380,18,0	1/1:20,1:21:11.72:379,12,0	1/1:22,0:22:15.05:515,15,0	1/1:28,0:28:14.90:187,15,0	0/1:17,0:17:99:111,0,218	0/1:21,0:12:50.98:483,0,51	1/1:30,0:30:7.73:293,8,0	1/1:63,0:59:3.01:42,3,0	0/0:25,0:25:2.97:0,3,21	1/1:10,1:11:9.29:217,9,0	0/1:41,0:41:0.01:0,0,0	0/0:27,0:27:75.26:0,75,3708	1/1:31,0:30:66.29:1375,66,0	1/1:40,0:40:42.10:1311,42,0	1/1:11,0:11:18.06:613,18,0
chr10	88190124	.	TGTGCATGTGTGA	T	8166.83	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=8.245;DP=801;FS=0.000;HRun=0;HaplotypeScore=216.5629;InbreedingCoeff=0.3351;MQ=42.93;MQ0=48;MQRankSum=-2.395;QD=13.96;ReadPosRankSum=5.348;VQSLOD=2.7391;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,36:41:3.01:83,3,0	1/1:7,0:7:3.01:37,3,0	0/0:84,0:12:29.11:0,29,582	0/0:79,0:18:25.87:0,26,645	0/1:25,0:25:0:1,0,0	1/1:25,0:24:5.98:77,6,0	0/1:18,0:18:40.09:40,0,160	0/1:23,0:22:49.07:578,0,49	1/1:17,0:16:3.01:89,3,0	1/1:29,0:27:78.94:1126,79,0	0/1:7,0:7:0:0,0,0	1/1:25,0:25:8.70:252,9,0	1/1:19,0:18:20.83:563,21,0	1/1:17,0:17:0.24:297,0,0	1/1:21,0:21:11.83:324,12,0	1/1:22,0:22:15.05:445,15,0	1/1:26,1:27:21.44:360,21,0	0/1:17,0:17:90.51:91,0,208	0/1:20,0:11:74.96:441,0,75	1/1:30,0:30:7.73:251,8,0	1/1:61,0:57:3.01:42,3,0	0/0:26,0:25:3:0,3,31	1/1:11,0:11:7.74:180,8,0	0/1:41,0:41:0:0,0,0	0/0:27,0:27:75.26:0,75,3374	1/1:31,0:30:67.11:1248,67,0	1/1:40,0:40:33.94:1113,34,0	1/1:11,0:11:18.06:529,18,0
chr10	88190126	.	TGCATGTGTGA	T	8029.44	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=7.620;DP=781;FS=1.127;HRun=0;HaplotypeScore=199.8387;InbreedingCoeff=0.2985;MQ=42.56;MQ0=49;MQRankSum=-2.627;QD=14.04;ReadPosRankSum=4.920;VQSLOD=3.7847;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:40:3.01:55,3,0	1/1:5,2:7:3.01:57,3,0	0/0:83,0:12:28.85:0,29,561	0/0:76,0:16:25.81:0,26,592	0/1:25,0:25:0:1,0,0	1/1:25,0:24:5.98:63,6,0	0/1:17,0:17:39.92:40,0,137	0/1:22,0:21:71.14:573,0,71	1/1:16,0:15:2.69:75,3,0	1/1:28,2:28:84.24:1698,84,0	0/1:6,0:6:0:0,0,0	1/1:25,0:25:8.60:209,9,0	1/1:18,0:17:20.83:480,21,0	0/1:17,0:17:26.90:240,0,27	1/1:21,0:21:11.93:268,12,0	1/1:20,0:20:15.05:375,15,0	1/1:10,18:28:21.50:497,21,0	0/1:18,0:18:46.23:46,0,220	0/1:20,0:11:98.91:406,0,99	1/1:30,0:30:7.75:209,8,0	1/1:57,0:53:3.01:42,3,0	0/0:23,0:22:2.37:0,2,8	1/1:11,0:11:8.05:153,8,0	0/1:38,0:38:0:0,0,0	0/0:27,0:27:75.26:0,75,3010	1/1:31,0:30:55.18:1128,55,0	1/1:39,0:39:42.13:968,42,0	1/1:11,0:11:18.06:445,18,0
chr10	88190127	.	GCA	G	3479.17	PASS	AB=0.908;AC=37;AF=0.685;AN=54;BaseQRankSum=8.638;DP=758;FS=0.000;HRun=0;HaplotypeScore=170.6061;InbreedingCoeff=0.3151;MQ=42.56;MQ0=47;MQRankSum=-3.111;QD=7.03;ReadPosRankSum=5.136;VQSLOD=3.1505;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:38,1:39:3.01:36,3,0	1/1:2,5:7:3.01:37,3,0	0/0:81,1:12:29.85:0,30,414	0/0:70,2:15:25.05:0,25,461	0/1:25,0:25:0:0,0,0	0/0:24,0:23:2.74:0,3,12	0/1:15,0:15:20.75:21,0,169	0/1:19,1:20:31.91:394,0,32	1/1:13,0:13:2.90:17,3,0	1/1:16,14:28:84.10:1043,84,0	0/1:0,6:6:0:0,0,0	1/1:24,0:24:8.48:42,8,0	1/1:18,0:17:20.40:152,20,0	0/1:16,1:17:56.40:56,0,64	1/1:20,0:20:11.63:65,12,0	1/1:19,0:19:14.57:84,15,0	1/1:19,9:28:22.05:236,22,0	0/1:16,0:16:31.38:31,0,270	0/1:20,0:11:67.53:218,0,68	1/1:30,0:30:6.62:42,7,0	1/1:56,0:52:2.97:21,3,0	0/0:21,0:20:2.98:0,3,22	1/1:9,0:10:7.57:36,8,0	./.	0/0:27,0:27:75.26:0,75,1468	1/1:30,1:30:65.31:605,65,0	1/1:39,0:39:40.46:244,40,0	1/1:10,0:10:17.48:99,17,0
chr10	88190130	.	TGTGTGA	T	3754.49	PASS	AB=1.000;AC=37;AF=0.685;AN=54;BaseQRankSum=8.715;DP=748;FS=1.169;HRun=0;HaplotypeScore=185.6006;InbreedingCoeff=0.2678;MQ=42.89;MQ0=42;MQRankSum=-3.631;QD=7.23;ReadPosRankSum=5.892;VQSLOD=2.2771;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:39:2.96:19,3,0	1/1:6,1:7:2.94:18,3,0	0/0:77,0:10:9.91:0,10,361	0/0:70,0:13:22.74:0,23,465	0/1:25,0:25:0:0,0,0	1/1:24,0:23:5.84:35,6,0	0/1:17,0:17:3.39:3,0,163	0/1:21,0:20:48.34:48,0,189	1/1:14,0:13:3.01:42,3,0	1/1:21,9:28:75.07:1032,75,0	0/1:6,0:6:0:0,0,0	1/1:24,0:24:8.84:126,9,0	1/1:18,0:17:20.71:246,21,0	0/1:17,0:17:79.46:108,0,79	1/1:20,0:20:11.50:138,11,0	1/1:19,0:19:15.05:211,15,0	1/1:20,8:28:22.15:320,22,0	0/1:17,0:17:28.86:29,0,334	0/1:19,0:12:99:122,0,205	1/1:30,0:30:9.02:115,9,0	0/1:53,0:51:0.01:0,0,0	0/0:20,0:20:2.04:0,2,6	1/1:10,0:10:8.82:95,9,0	./.	0/0:26,0:26:69.16:0,69,1876	0/1:31,0:30:45.16:315,0,45	1/1:39,0:39:12.27:483,12,0	1/1:10,0:10:18.06:248,18,0
chr10	88190136	.	AGT	A	1014.55	PASS	AB=0.985;AC=36;AF=0.667;AN=54;BaseQRankSum=7.182;DP=743;FS=5.125;HRun=0;HaplotypeScore=174.7098;InbreedingCoeff=0.4364;MQ=42.04;MQ0=35;MQRankSum=-5.524;QD=2.08;ReadPosRankSum=5.739;VQSLOD=2.0105;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:39:0:0,0,0	1/1:7,0:7:0.89:2,1,0	0/0:74,0:11:21.02:0,21,281	0/0:72,0:12:18.06:0,18,282	0/1:25,0:25:0:0,0,0	0/1:22,1:23:0.40:0,0,5	1/1:3,11:14:11.97:146,12,0	0/0:22,0:21:9.55:0,10,181	1/1:14,0:13:2.74:12,3,0	1/1:28,0:27:12.43:87,12,0	./.	1/1:24,0:24:8.58:48,9,0	1/1:18,0:17:13.31:56,13,0	1/1:17,0:17:1.02:108,1,0	0/1:20,0:20:4.05:27,0,4	1/1:19,0:19:13.94:63,14,0	1/1:28,0:28:13.38:54,13,0	1/1:7,10:17:3.64:262,4,0	0/1:17,0:13:3.44:3,0,125	1/1:29,0:30:6.23:27,6,0	0/0:52,0:52:5.59:0,6,33	0/1:20,0:21:8.12:8,0,13	1/1:10,0:10:6.31:25,6,0	0/1:37,0:37:0:0,0,0	0/0:24,1:25:48.15:0,48,750	0/1:30,0:30:38.01:38,0,81	1/1:38,0:39:26.48:133,26,0	1/1:10,0:10:16.21:71,16,0
chr10	88190427	.	TGTC	T	4703.17	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.799;DP=571;FS=5.907;HRun=0;HaplotypeScore=90.3674;InbreedingCoeff=0.9975;MQ=83.32;MQ0=0;MQRankSum=-3.652;QD=43.15;ReadPosRankSum=1.812;VQSLOD=6.0968;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.20:0,66,1427	0/0:6,0:6:18.04:0,18,369	0/0:24,0:24:65.68:0,66,1318	0/0:12,0:12:33.11:0,33,681	0/0:28,0:28:78.27:0,78,1745	1/1:2,27:29:75.26:1278,75,0	1/1:2,17:19:42.14:714,42,0	0/0:27,0:27:66.22:0,66,1380	0/0:23,0:23:63.22:0,63,1425	0/0:21,0:21:63.18:0,63,1402	0/0:13,0:13:39.12:0,39,845	1/1:0,9:9:27.09:460,27,0	0/0:24,0:24:69.22:0,69,1531	1/1:2,13:15:42.10:679,42,0	0/0:10,0:10:27.08:0,27,578	0/0:18,0:18:54.17:0,54,1173	0/0:16,0:15:45.15:0,45,1001	1/1:0,10:10:27.09:460,27,0	0/0:20,0:20:60.16:0,60,1258	0/0:42,0:42:99:0,120,2679	0/0:17,0:17:45.15:0,45,1007	1/1:1,26:27:69.15:1112,69,0	0/0:27,0:27:81.26:0,81,1796	0/0:10,0:10:27.09:0,27,610	0/0:28,0:28:84.29:0,84,1873	0/0:22,0:22:60.21:0,60,1361	0/0:32,0:31:87.26:0,87,1948	0/0:19,0:19:57.20:0,57,1292
chr10	88190964	.	CT	C	3639.05	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.600;DP=721;FS=7.192;HRun=1;HaplotypeScore=90.6455;InbreedingCoeff=0.9976;MQ=86.82;MQ0=0;MQRankSum=0.225;QD=35.33;ReadPosRankSum=0.737;VQSLOD=3.4926;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:82.24:0,82,1134	0/0:11,0:11:33.11:0,33,486	0/0:39,0:37:99:0,104,1382	0/0:43,0:42:78.11:0,78,1067	0/0:26,0:26:78.23:0,78,1111	0/0:25,0:25:75.22:0,75,1068	0/0:30,0:30:87.27:0,87,1261	1/1:0,22:22:63.10:755,63,0	0/0:20,1:21:51.65:0,52,837	0/0:27,0:27:81.26:0,81,1155	0/0:13,0:13:33.11:0,33,477	0/0:29,0:29:87.23:0,87,1218	0/0:33,0:33:96.26:0,96,1314	0/0:20,0:20:60.19:0,60,878	0/0:18,0:18:54.16:0,54,745	0/0:26,0:26:78.25:0,78,1125	0/0:26,0:26:69.23:0,69,1107	0/0:19,0:19:54.11:0,54,730	0/0:13,0:13:39.12:0,39,540	0/0:26,0:26:72.21:0,72,1011	1/1:0,37:37:84.28:1167,84,0	0/0:34,0:34:99:0,102,1407	0/0:28,0:28:81.16:0,81,1116	0/0:33,0:33:99:0,99,1331	0/0:18,0:18:54.17:0,54,775	1/1:0,38:37:99:1467,111,0	0/0:30,0:30:87.27:0,87,1195	1/1:0,6:6:18.06:251,18,0
chr10	88191164	.	G	GA	3530.01	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-9.713;DP=592;FS=7.347;HRun=8;HaplotypeScore=58.7749;InbreedingCoeff=0.9977;MQ=76.70;MQ0=0;MQRankSum=1.284;QD=24.01;ReadPosRankSum=1.613;VQSLOD=4.3338;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,33:41:96.28:1105,96,0	0/0:8,0:8:21.01:0,21,192	0/0:26,0:26:56.25:0,56,466	0/0:18,0:18:31.66:0,32,263	0/0:20,0:20:51.01:0,51,466	0/0:19,0:19:48.02:0,48,439	0/0:26,0:26:75.04:0,75,686	1/1:10,21:31:54.13:610,54,0	0/0:22,0:22:57.03:0,57,522	0/0:23,0:23:63.03:0,63,576	0/0:7,0:7:21.01:0,21,192	0/0:21,0:21:51.02:0,51,466	0/0:15,0:15:36.02:0,36,328	0/0:27,0:27:66.01:0,66,599	0/0:12,0:12:33.01:0,33,302	0/0:18,0:18:51.03:0,51,467	0/0:26,0:26:72.03:0,72,658	0/0:26,0:26:68.98:0,69,618	0/0:22,0:22:60.01:0,60,543	0/0:17,0:17:42.02:0,42,384	1/1:8,21:31:29.37:555,29,0	0/0:17,0:17:48.03:0,48,439	0/0:16,0:16:39.01:0,39,357	0/0:17,0:17:39:0,39,352	0/0:16,0:16:45.02:0,45,412	1/1:2,22:24:41.76:711,42,0	0/0:26,0:26:72.02:0,72,654	1/1:0,18:20:50.82:548,51,0
chr10	88191330	.	CAG	C	4554.26	PASS	AB=1.000;AC=52;AF=0.929;AN=56;BaseQRankSum=1.718;DP=475;FS=27.454;HRun=0;HaplotypeScore=95.4669;InbreedingCoeff=0.3568;MQ=45.91;MQ0=26;MQRankSum=3.212;QD=9.86;ReadPosRankSum=0.073;VQSLOD=2.6759;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:28,2:30:29.56:269,30,0	1/1:5,0:5:14.91:114,15,0	0/1:34,0:7:6.19:6,0,76	0/1:41,0:16:46.23:46,0,140	1/1:13,2:14:11.89:102,12,0	1/1:5,5:10:5.93:44,6,0	1/1:16,2:17:17.81:151,18,0	1/1:15,0:15:35.63:257,36,0	1/1:1,21:22:5.91:49,6,0	1/1:13,1:12:31.65:259,32,0	1/1:10,1:10:5.98:47,6,0	1/1:9,2:10:11.50:98,11,0	1/1:14,1:14:24.88:192,25,0	1/1:8,1:9:11.82:86,12,0	1/1:10,3:12:17.96:159,18,0	1/1:13,0:13:20.95:211,21,0	1/1:19,0:17:32.87:312,33,0	1/1:9,0:8:18.18:114,18,0	1/1:11,12:20:28.22:399,28,0	1/1:15,0:14:8.92:64,9,0	1/1:23,1:19:21.73:220,22,0	1/1:19,1:20:26.64:217,27,0	1/1:0,8:8:3:29,3,0	1/1:19,1:19:29.96:301,30,0	0/0:13,0:13:27.08:0,27,482	1/1:2,12:14:32.86:274,33,0	1/1:25,2:25:48.58:473,49,0	1/1:6,1:4:8.91:61,9,0
chr10	88191340	.	CACACACAG	C	2486.57	PASS	AB=1.000;AC=43;AF=0.796;AN=54;BaseQRankSum=-1.135;DP=451;FS=1.796;HRun=0;HaplotypeScore=131.4310;InbreedingCoeff=0.3007;MQ=44.78;MQ0=27;MQRankSum=-0.322;QD=6.56;ReadPosRankSum=-2.041;VQSLOD=2.2260;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:17.90:137,18,0	1/1:6,0:6:9.80:67,10,0	0/0:20,0:5:2.94:0,3,20	0/0:26,0:6:0.47:0,0,1	0/1:14,0:12:8.44:16,0,8	1/1:10,4:14:6.08:83,6,0	1/1:13,2:14:13.67:172,14,0	1/1:14,0:14:23.44:142,23,0	1/1:22,0:22:0.60:2,1,0	1/1:18,0:15:25.35:183,25,0	./.	1/1:8,2:9:8.10:142,8,0	1/1:12,0:11:11.65:99,12,0	1/1:7,1:8:6.46:48,6,0	1/1:11,0:10:4.53:14,5,0	1/1:12,0:12:12.70:107,13,0	1/1:21,0:19:28.96:216,29,0	1/1:12,0:10:13.69:94,14,0	0/1:24,0:20:48.97:49,0,112	0/1:15,0:14:11.33:20,0,11	1/1:25,0:20:25.36:216,25,0	1/1:20,0:20:17.38:129,17,0	0/1:8,0:8:0.05:0,0,0	1/1:21,0:20:23.46:247,23,0	0/0:15,0:15:25.61:0,26,798	1/1:14,0:14:27.73:313,28,0	0/1:27,0:24:57.51:58,0,146	1/1:6,0:3:6.48:70,6,0
chr10	88191344	.	CACAG	C	4327.33	PASS	AC=48;AF=0.923;AN=52;BaseQRankSum=3.777;DP=427;FS=5.884;HRun=0;HaplotypeScore=107.1333;InbreedingCoeff=0.5702;MQ=43.54;MQ0=23;MQRankSum=1.537;QD=11.66;ReadPosRankSum=0.243;VQSLOD=4.0399;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,1:30:23.86:318,24,0	1/1:6,0:6:17.89:136,18,0	0/0:11,0:2:2.98:0,3,21	./.	1/1:13,0:11:5.99:55,6,0	1/1:14,0:14:4.37:43,4,0	1/1:17,0:16:17.79:157,18,0	1/1:16,0:16:38.40:246,38,0	1/1:22,0:22:5.78:69,6,0	1/1:17,1:15:38.03:347,38,0	./.	1/1:9,0:8:8.48:87,8,0	1/1:12,0:11:21.49:186,21,0	1/1:9,0:9:9.45:74,9,0	1/1:8,2:9:6.01:107,6,0	1/1:13,0:13:20.63:265,21,0	1/1:21,0:19:42.60:455,43,0	1/1:12,0:10:20.05:128,20,0	1/1:21,0:17:25.82:237,26,0	1/1:14,0:13:8.91:63,9,0	1/1:25,0:20:28.99:239,29,0	1/1:18,0:18:17.23:129,17,0	1/1:8,0:8:3.48:50,3,0	1/1:19,0:18:23.90:310,24,0	0/0:15,0:15:21.05:0,21,470	1/1:13,0:13:27.75:277,28,0	1/1:25,0:22:32.41:272,32,0	1/1:5,1:3:8.96:77,9,0
chr10	88191346	.	CAG	C	4160.67	PASS	AC=48;AF=0.923;AN=52;BaseQRankSum=4.626;DP=419;FS=4.112;HRun=0;HaplotypeScore=98.8354;InbreedingCoeff=0.5853;MQ=43.78;MQ0=23;MQRankSum=0.302;QD=11.28;ReadPosRankSum=0.097;VQSLOD=3.4055;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:30,1:31:23.91:230,24,0	1/1:6,0:6:17.90:137,18,0	0/0:9,0:2:2.98:0,3,21	./.	1/1:13,1:11:5.99:63,6,0	1/1:13,0:13:3:27,3,0	1/1:17,0:16:17.77:143,18,0	1/1:16,0:16:41.35:265,41,0	1/1:20,2:22:5.91:50,6,0	1/1:5,13:15:40.22:316,40,0	./.	1/1:9,0:8:11.44:92,11,0	1/1:11,1:11:21.39:174,21,0	1/1:9,0:9:9.45:74,9,0	1/1:8,1:8:6.01:68,6,0	1/1:14,0:14:25.10:227,25,0	1/1:21,0:19:44.66:392,45,0	1/1:12,0:10:20.26:136,20,0	1/1:21,0:17:31:345,31,0	1/1:14,0:13:8.78:63,9,0	1/1:23,0:18:29.47:242,29,0	1/1:17,0:17:17.45:130,17,0	1/1:8,0:8:6:54,6,0	1/1:18,1:18:23.98:257,24,0	0/0:15,0:15:20.07:0,20,306	1/1:13,0:13:28.09:226,28,0	1/1:25,0:22:34.62:387,35,0	1/1:6,0:3:8.93:63,9,0
chr10	88191362	.	CAGAGAGAG	C	105.06	PASS	AB=1.000;AC=5;AF=0.096;AN=52;BaseQRankSum=0.590;DP=385;FS=4.796;HRun=0;HaplotypeScore=137.9420;InbreedingCoeff=0.0498;MQ=43.06;MQ0=13;MQRankSum=0.403;QD=1.33;ReadPosRankSum=0.360;VQSLOD=2.6006;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,9:26:2.97:62,3,0	0/0:4,0:4:6.08:0,6,105	./.	./.	0/0:11,0:9:6.02:0,6,228	0/0:16,0:16:3.01:0,3,53	0/0:15,0:14:5.88:0,6,58	0/0:12,0:12:8.89:0,9,63	0/0:22,0:22:3.01:0,3,115	0/0:17,0:14:24.04:0,24,507	0/0:12,0:12:2.99:0,3,23	0/0:9,0:8:3.90:0,4,80	0/0:15,0:14:18.04:0,18,480	0/0:10,0:10:12.04:0,12,211	0/0:12,0:11:3.01:0,3,100	0/0:17,0:17:15.05:0,15,511	0/0:19,0:17:17.02:0,17,223	0/0:10,0:8:21.07:0,21,496	0/0:19,0:17:7.38:0,7,35	0/0:15,0:14:2.37:0,2,8	0/1:21,0:19:10.87:11,0,26	0/0:14,0:14:11.54:0,12,126	0/0:11,0:11:9.03:0,9,313	0/0:16,0:15:9.17:0,9,198	0/0:15,0:15:9.03:0,9,323	0/0:15,0:15:19.39:0,19,170	0/1:25,0:22:21.73:75,0,22	0/1:7,0:4:12.45:63,0,12
chr10	88191666	.	A	ATT	6565.05	PASS	AB=0.772;AC=51;AF=0.911;AN=56;BaseQRankSum=0.770;DP=474;FS=3.920;HRun=14;HaplotypeScore=109.5361;InbreedingCoeff=0.2128;MQ=60.55;MQ0=5;MQRankSum=-2.400;QD=14.18;ReadPosRankSum=-1.638;VQSLOD=3.6676;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,14:28:8.82:354,0,9	1/1:4,2:6:8.98:88,9,0	0/0:11,0:9:1.16:0,1,3	0/1:13,0:11:4.51:5,0,16	1/1:10,1:19:41.90:399,42,0	1/1:3,15:19:38.49:479,38,0	1/1:12,6:21:34.51:275,35,0	1/1:16,0:22:34.22:303,34,0	1/1:10,2:14:30.38:283,30,0	1/1:9,0:16:26.76:229,27,0	1/1:4,3:8:17.39:167,17,0	1/1:7,5:15:11.93:117,12,0	1/1:10,1:17:19.29:207,19,0	1/1:13,10:22:22.06:175,22,0	1/1:8,2:18:30.55:279,31,0	1/1:12,2:20:28:275,28,0	1/1:9,3:17:36.01:378,36,0	1/1:8,3:13:22.70:210,23,0	1/1:13,0:14:34.36:289,34,0	1/1:17,0:20:26.60:222,27,0	1/1:6,1:10:3.42:30,3,0	1/1:8,4:12:11.99:137,12,0	1/1:7,3:22:32.75:293,33,0	1/1:11,1:16:12.90:126,13,0	0/1:7,0:13:14.40:26,0,14	1/1:8,1:16:31.20:277,31,0	1/1:20,1:23:61.82:626,62,0	1/1:9,0:15:33.01:319,33,0
chr10	88192538	.	T	TTTA	7119.20	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-12.314;DP=470;FS=9.372;HRun=0;HaplotypeScore=60.9455;InbreedingCoeff=0.9496;MQ=65.89;MQ0=0;MQRankSum=-0.179;QD=43.95;ReadPosRankSum=1.349;VQSLOD=5.6769;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:64.71:0,65,1410	1/1:0,4:4:12.04:248,12,0	0/0:4,0:2:6.02:0,6,80	0/0:10,0:10:8.51:0,9,115	1/1:4,22:27:66.22:1289,66,0	0/0:11,0:11:33.11:0,33,480	0/0:12,0:12:18.06:0,18,264	0/0:38,0:38:78.24:0,78,1085	1/1:5,6:11:18.06:348,18,0	1/1:4,19:23:57.20:1175,57,0	1/1:4,17:21:51.17:1007,51,0	0/0:8,0:8:21.07:0,21,305	1/1:2,10:12:24.08:495,24,0	0/0:16,0:16:39.13:0,39,571	1/1:5,8:13:30.10:603,30,0	1/1:3,7:10:24.08:487,24,0	1/1:5,17:23:45.15:928,45,0	0/0:22,0:22:47.79:0,48,702	0/0:21,0:21:54.14:0,54,731	0/0:24,0:24:45.14:0,45,638	0/0:8,0:8:21.07:0,21,307	0/0:6,0:6:9.03:0,9,132	1/1:5,8:13:18.06:363,18,0	1/1:2,3:5:9.03:177,9,0	0/0:22,0:22:60.20:0,60,879	0/0:29,0:29:72.23:0,72,1035	0/0:28,0:28:69.23:0,69,1009	0/0:12,0:12:36.12:0,36,527
chr10	88192790	.	CT	C	3795.05	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.206;DP=611;FS=7.099;HRun=4;HaplotypeScore=75.3268;InbreedingCoeff=0.9967;MQ=75.72;MQ0=0;MQRankSum=-2.708;QD=30.61;ReadPosRankSum=0.002;VQSLOD=3.7001;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,37:40:99:1259,105,0	0/0:7,0:7:18.06:0,18,252	0/0:24,0:24:66.20:0,66,891	0/0:16,0:16:36.08:0,36,483	0/0:31,0:31:93.31:0,93,1302	0/0:23,0:23:63.21:0,63,878	0/0:19,0:19:57.18:0,57,781	1/1:2,26:28:75.23:899,75,0	0/0:29,0:29:84.28:0,84,1175	0/0:26,0:26:75.25:0,75,1047	0/0:27,0:27:75.23:0,75,1015	0/0:21,0:21:60.20:0,60,839	0/0:23,0:23:63.19:0,63,846	0/0:24,0:24:69.23:0,69,966	0/0:28,0:28:75.24:0,75,1032	0/0:21,0:21:60.17:0,60,819	0/0:17,0:17:42.14:0,42,588	0/0:14,0:14:42.14:0,42,588	0/0:21,0:21:48.16:0,48,672	0/0:16,0:16:45.15:0,45,630	1/1:2,22:24:57.17:684,57,0	0/0:17,0:17:51.17:0,51,714	0/0:19,0:19:54.18:0,54,756	0/0:17,0:17:48.16:0,48,672	0/0:16,0:16:45.15:0,45,630	1/1:1,20:21:21.15:665,21,0	0/0:31,0:30:87.27:0,87,1198	1/1:3,8:11:24.07:288,24,0
chr10	88192907	.	CTCCT	C	1755.69	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.539;DP=663;FS=2.072;HRun=0;HaplotypeScore=138.8364;InbreedingCoeff=0.9391;MQ=54.67;MQ0=15;MQRankSum=-1.456;QD=25.44;ReadPosRankSum=-0.352;VQSLOD=3.6792;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:31.93:0,32,271	0/0:7,0:7:15.05:0,15,324	0/0:34,0:22:33.07:0,33,626	0/0:37,0:26:33.08:0,33,618	0/0:29,0:29:74.94:0,75,1572	0/0:17,0:17:19.97:0,20,625	0/0:23,0:23:48.14:0,48,1096	0/0:24,0:22:14.86:0,15,119	0/0:26,0:26:63.22:0,63,1463	0/0:23,0:23:60.19:0,60,1290	0/0:18,0:18:27.08:0,27,588	0/0:20,0:19:42.12:0,42,858	0/0:30,0:29:60.19:0,60,1351	0/0:28,0:27:51.17:0,51,1168	0/0:26,0:26:69.05:0,69,1490	0/0:21,0:21:51.13:0,51,1110	0/0:25,0:25:44.63:0,45,965	0/0:25,0:24:42.13:0,42,841	1/1:16,8:20:36.11:552,36,0	1/1:9,8:15:33.09:496,33,0	0/0:19,0:19:5.08:0,5,113	0/0:24,0:24:39.13:0,39,861	0/0:13,0:13:30.10:0,30,696	0/0:38,0:37:66.60:0,67,1456	0/0:25,0:25:51.17:0,51,1217	0/0:20,0:19:17.56:0,18,284	1/1:18,10:28:54.15:851,54,0	0/0:11,0:11:19.59:0,20,229
chr10	88192934	.	CTCCTTCCTTCCTTCCT	C	7751.03	PASS	AB=0.939;AC=38;AF=0.826;AN=46;BaseQRankSum=2.426;DP=544;FS=2.566;HRun=0;HaplotypeScore=215.2376;InbreedingCoeff=0.1269;MQ=44.92;MQ0=21;MQRankSum=-3.034;QD=16.67;ReadPosRankSum=-1.553;VQSLOD=3.8740;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:17:4.93:12,5,0	1/1:2,6:8:6.02:183,6,0	./.	./.	1/1:28,0:28:23.99:541,24,0	1/1:7,0:7:8.96:157,9,0	1/1:22,0:20:29.95:659,30,0	./.	1/1:25,0:25:14.08:874,14,0	1/1:21,0:18:20.85:271,21,0	1/1:7,8:15:12.04:223,12,0	1/1:10,15:24:12.04:386,12,0	1/1:25,0:26:32.97:766,33,0	1/1:16,17:32:11.97:341,12,0	1/1:22,0:22:27.05:695,27,0	1/1:19,0:18:15.61:467,16,0	1/1:12,13:25:8.20:280,8,0	0/1:11,0:26:93.96:94,0,109	0/1:31,0:25:19.91:540,0,20	0/1:18,0:16:68.64:231,0,69	./.	1/1:9,11:20:8.96:196,9,0	1/1:12,0:12:15.04:384,15,0	0/1:30,0:30:99:255,0,105	0/0:27,0:26:45.14:0,45,2089	0/1:10,0:10:0:0,0,0	0/1:20,0:20:58.77:197,0,59	./.
chr10	88192950	.	T	TTTC	4700.57	PASS	AB=0.859;AC=24;AF=0.429;AN=56;BaseQRankSum=3.861;DP=506;FS=35.780;HRun=0;HaplotypeScore=114.0916;InbreedingCoeff=-0.2108;MQ=46.53;MQ0=17;MQRankSum=-3.803;QD=12.91;ReadPosRankSum=-1.048;VQSLOD=2.5207;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:6:10.67:42,11,0	0/0:7,0:7:8.95:0,9,122	0/0:6,0:2:6.02:0,6,80	0/0:11,0:6:5.19:0,5,97	0/1:20,4:24:99:258,0,648	0/1:12,0:12:99:228,0,184	0/1:20,3:21:99:652,0,246	1/1:20,0:12:27.09:545,27,0	0/1:20,7:27:99:206,0,715	0/1:15,1:14:99:143,0,392	0/1:11,0:11:37.81:208,0,38	0/1:21,0:20:25.41:25,0,242	0/1:17,11:28:99:257,0,552	0/0:27,0:26:27.68:0,28,497	0/1:14,6:20:99:270,0,400	0/1:17,3:20:99:103,0,630	0/0:24,0:23:18.65:0,19,518	0/0:26,0:25:41.86:0,42,568	0/1:20,0:18:99:332,0,309	0/1:11,0:18:99:210,0,291	1/1:11,0:11:27.09:494,27,0	0/0:15,0:15:20.80:0,21,280	0/1:11,3:15:99:194,0,272	0/1:25,12:37:99:109,0,843	0/0:26,0:25:46.25:0,46,1083	0/1:7,0:6:60.84:61,0,62	0/1:12,0:17:79.43:79,0,511	1/1:5,0:5:15.05:283,15,0
chr10	88192968	.	CCTTCCTTCCTTCCTTT	C	7509.16	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=8.838;DP=480;FS=2.072;HRun=0;HaplotypeScore=187.9132;InbreedingCoeff=-0.4746;MQ=53.54;MQ0=11;MQRankSum=-4.199;QD=18.18;ReadPosRankSum=7.841;VQSLOD=2.5292;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:13:32.20:0,32,196	0/1:7,0:7:30.96:135,0,31	0/0:19,0:14:38.96:0,39,435	0/0:8,0:5:9.69:0,10,167	0/1:13,0:13:19.09:384,0,19	0/1:11,0:11:6.03:190,0,6	0/1:29,0:27:92.54:636,0,93	0/1:18,0:14:68.94:279,0,69	0/1:24,0:24:84.94:600,0,85	0/1:13,0:12:64.86:124,0,65	0/1:9,0:9:9.96:137,0,10	0/1:22,0:22:99:298,0,129	0/1:23,0:23:72.67:492,0,73	0/1:23,0:24:92.92:236,0,93	0/1:20,0:20:99:500,0,117	0/1:13,0:12:38.89:369,0,39	0/1:22,0:21:99:195,0,144	0/1:24,0:23:48.49:48,0,253	1/1:19,2:19:54.05:1060,54,0	1/1:17,3:20:32.97:545,33,0	0/1:17,0:17:93.91:225,0,94	0/1:17,0:17:99:113,0,139	0/1:13,0:13:71.02:300,0,71	0/1:21,0:20:99:148,0,222	0/0:25,0:25:66.12:0,66,2443	0/1:11,0:11:6.01:6,0,192	1/1:11,1:12:14.76:328,15,0	0/1:9,0:9:70.92:157,0,71
chr10	88192971	.	TCCTTCCTTCCTTTC	T	3733.15	PASS	AB=0.956;AC=19;AF=0.339;AN=56;BaseQRankSum=11.081;DP=486;FS=6.183;HRun=0;HaplotypeScore=189.6176;InbreedingCoeff=-0.5239;MQ=54.09;MQ0=10;MQRankSum=-7.660;QD=10.64;ReadPosRankSum=5.805;VQSLOD=1.5576;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:16:42.14:0,42,755	0/1:7,0:7:49.70:50,0,101	0/0:19,0:14:39.13:0,39,720	0/0:9,0:6:14.66:0,15,285	0/1:9,4:13:27.14:326,0,27	0/1:12,0:12:13.33:13,0,118	0/1:28,0:26:99:120,0,462	0/0:19,0:15:33.20:0,33,355	0/1:21,3:24:99:497,0,128	0/1:10,0:10:15.91:16,0,345	0/0:9,0:9:3.66:0,4,76	0/1:24,0:24:99:102,0,443	0/1:21,1:22:70.68:433,0,71	0/1:25,0:25:99:107,0,316	0/1:17,3:20:82.60:439,0,83	0/1:9,4:12:55.51:318,0,56	0/1:23,0:22:99:110,0,376	0/1:24,0:23:99:133,0,514	0/1:21,0:19:99:389,0,142	0/1:19,0:19:70.75:135,0,71	0/0:17,0:17:40.55:0,41,521	0/1:18,0:18:24.05:24,0,473	0/1:12,1:13:57.47:250,0,57	0/1:23,0:22:99:112,0,247	0/0:24,0:24:69.21:0,69,2821	0/0:11,0:11:31.66:0,32,534	0/1:12,0:12:23.03:159,0,23	0/0:9,0:9:19.93:0,20,253
chr10	88193077	.	A	AC	1389.61	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.491;DP=577;FS=1.324;HRun=0;HaplotypeScore=83.7135;InbreedingCoeff=0.9553;MQ=87.98;MQ0=1;MQRankSum=-6.291;QD=30.21;ReadPosRankSum=-2.277;VQSLOD=2.8662;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:9:17.75:254,18,0	0/0:8,0:8:24.08:0,24,335	0/0:25,0:25:56.80:0,57,783	0/0:29,0:28:65.39:0,65,792	0/0:24,0:24:66.20:0,66,900	0/0:20,0:19:54.17:0,54,737	0/0:29,0:29:78.26:0,78,1091	1/1:0,13:13:38.98:481,39,0	0/0:27,0:27:78.24:0,78,1072	0/0:27,0:27:75.25:0,75,1049	0/0:11,0:11:33.11:0,33,461	0/0:19,0:18:51.17:0,51,712	0/0:25,0:25:72.24:0,72,1005	0/0:22,0:22:60.19:0,60,821	0/0:21,0:21:60.20:0,60,838	0/0:26,0:26:69.23:0,69,961	0/0:26,0:26:72.22:0,72,985	0/0:19,0:19:48.13:0,48,651	0/0:22,0:22:63.21:0,63,880	0/0:18,0:18:54.14:0,54,733	1/1:1,10:10:27.45:350,27,0	0/0:20,0:20:48.16:0,48,671	0/0:20,0:20:57.19:0,57,797	0/0:45,0:45:99:0,120,1675	0/0:20,0:20:54.18:0,54,755	1/1:0,11:11:30.10:429,30,0	0/0:28,0:28:81.21:0,81,1083	1/1:1,1:1:3.01:42,3,0
chr10	88193084	.	C	CCTT	2253.83	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.684;DP=571;FS=0.640;HRun=0;HaplotypeScore=101.4065;InbreedingCoeff=0.9544;MQ=81.74;MQ0=0;MQRankSum=-8.068;QD=40.98;ReadPosRankSum=-3.138;VQSLOD=4.0713;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,7:12:24.04:479,24,0	0/0:9,0:9:27.08:0,27,435	0/0:18,0:18:48.11:0,48,749	0/0:26,0:26:18.71:0,19,536	0/0:27,0:27:69.22:0,69,1133	0/0:21,0:20:45.14:0,45,730	0/0:27,0:27:78.20:0,78,1201	1/1:10,6:15:45.13:915,45,0	0/0:23,0:23:66.21:0,66,1085	0/0:27,0:27:72.24:0,72,1187	0/0:13,0:13:36.11:0,36,588	0/0:18,0:17:48.15:0,48,781	0/0:26,0:26:69.15:0,69,1132	0/0:21,0:21:63.22:0,63,1072	0/0:22,0:22:57.15:0,57,933	0/0:25,0:25:69.23:0,69,1138	0/0:27,0:27:63.20:0,63,1048	0/0:20,0:20:54.17:0,54,888	0/0:21,0:21:60.21:0,60,1022	0/0:15,0:15:42.14:0,42,707	1/1:4,10:13:20.93:432,21,0	0/0:19,0:19:51.15:0,51,814	0/0:17,0:17:45.15:0,45,745	0/0:43,0:43:99:0,111,1882	0/0:22,0:22:57.18:0,57,922	1/1:3,7:10:24.08:550,24,0	0/0:28,0:28:82.49:0,82,1349	1/1:3,0:3:3.01:46,3,0
chr10	88195258	.	T	TA	9786.53	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=19.179;DP=646;FS=0.625;HRun=4;HaplotypeScore=158.5933;InbreedingCoeff=0.9994;MQ=81.93;MQ0=0;MQRankSum=-6.217;QD=35.46;ReadPosRankSum=2.350;VQSLOD=3.2121;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,45:51:99:1681,123,0	0/0:13,0:13:39.09:0,39,429	0/0:27,0:27:67.71:0,68,712	0/0:15,0:16:24.70:0,25,295	0/0:16,0:16:45.11:0,45,500	1/1:1,14:15:42.14:574,42,0	1/1:2,25:27:75.25:1025,75,0	1/1:1,19:20:54.18:738,54,0	0/0:19,0:19:54.15:0,54,613	0/0:31,0:31:78.21:0,78,876	0/0:16,0:16:42.12:0,42,476	1/1:1,19:20:57.19:779,57,0	0/0:21,0:21:57.16:0,57,646	1/1:2,22:24:66.22:902,66,0	0/0:22,0:22:66.17:0,66,739	0/0:22,0:22:54.14:0,54,603	0/0:25,0:25:72.18:0,72,804	1/1:2,16:18:42.14:574,42,0	0/0:29,0:29:81.23:0,81,918	0/0:27,0:27:72.20:0,72,816	1/1:6,13:19:39.13:531,39,0	1/1:4,31:35:93.31:1271,93,0	0/0:18,0:18:54.15:0,54,613	0/0:28,0:28:75.20:0,75,839	0/0:22,0:22:66.19:0,66,749	1/1:4,35:39:74.30:1383,74,0	0/0:18,0:18:48.14:0,48,544	1/1:0,8:8:24.08:328,24,0
chr10	88195381	.	TTG	T	1406.52	PASS	AB=0.917;AC=29;AF=0.537;AN=54;BaseQRankSum=7.468;DP=620;FS=7.058;HRun=0;HaplotypeScore=117.6840;InbreedingCoeff=0.0413;MQ=61.58;MQ0=11;MQRankSum=-1.494;QD=3.47;ReadPosRankSum=0.989;VQSLOD=2.2018;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:44:52.32:0,52,563	0/1:12,1:13:14.96:15,0,159	./.	0/0:31,0:20:0:0,0,0	0/0:20,0:20:27.09:0,27,404	1/1:13,4:17:15.46:152,15,0	0/1:14,7:22:38.44:221,0,38	0/1:18,0:18:4.11:4,0,42	0/1:26,0:26:32.75:33,0,371	0/0:28,0:27:21.05:0,21,276	0/1:10,0:9:22.64:23,0,81	1/1:10,0:10:6.02:65,6,0	0/1:20,2:22:41.47:41,0,211	1/1:14,5:20:17.85:166,18,0	0/1:14,1:15:11.88:12,0,242	0/1:22,1:23:5.89:6,0,307	0/0:31,1:31:18.04:0,18,614	1/1:11,11:22:30.08:329,30,0	0/1:12,0:14:14.17:30,0,14	1/1:6,0:14:12.92:61,13,0	0/1:39,0:39:19.96:20,0,369	0/1:18,7:27:8.99:218,0,9	0/1:14,1:15:11.91:12,0,208	0/0:29,4:33:24.24:0,24,776	0/1:18,1:19:2.86:3,0,366	1/1:24,0:27:14.20:70,14,0	1/1:14,0:22:17.04:84,17,0	1/1:4,0:5:2.84:14,3,0
chr10	88197703	.	C	CA	11091.93	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=2.120;DP=598;FS=0.307;HRun=3;HaplotypeScore=91.8305;InbreedingCoeff=0.9955;MQ=69.72;MQ0=0;MQRankSum=-1.211;QD=37.47;ReadPosRankSum=0.717;VQSLOD=4.7146;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:30:78.26:1092,78,0	0/0:11,0:11:30.09:0,30,360	0/0:18,0:17:45.13:0,45,532	0/0:18,0:16:48:0,48,538	0/0:41,0:41:99:0,114,1366	1/1:0,22:22:57.19:798,57,0	1/1:2,13:15:39.13:541,39,0	1/1:1,35:36:99:1349,99,0	0/0:20,0:20:57.17:0,57,684	0/0:18,0:18:48.15:0,48,576	0/0:23,0:23:69.20:0,69,818	1/1:0,20:20:51.17:714,51,0	0/0:23,0:23:63.19:0,63,756	1/1:0,16:16:42.14:588,42,0	0/0:27,0:27:78.24:0,78,936	0/0:10,0:10:30.09:0,30,360	0/0:35,0:35:99:0,99,1187	1/1:0,18:18:48.16:672,48,0	1/1:0,20:20:54.18:754,54,0	1/1:1,30:31:90.30:1260,90,0	1/1:0,13:13:27.09:378,27,0	1/1:1,21:22:57.19:797,57,0	0/0:15,0:15:39.12:0,39,468	0/0:21,0:21:60.18:0,60,720	0/0:22,0:22:57.16:0,57,672	1/1:1,29:30:54.29:1181,54,0	1/1:0,19:19:57.19:798,57,0	1/1:0,4:4:12.04:168,12,0
chr10	88197974	.	TCC	T	8578.39	PASS	AB=0.519;AC=21;AF=0.375;AN=56;BaseQRankSum=13.771;DP=587;FS=6.765;HRun=2;HaplotypeScore=79.7773;InbreedingCoeff=0.9220;MQ=80.08;MQ0=0;MQRankSum=-4.905;QD=44.22;ReadPosRankSum=-0.779;VQSLOD=4.0689;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:87.23:1371,87,0	0/0:12,0:12:36.12:0,36,716	0/0:26,0:25:75.20:0,75,1344	0/0:26,0:27:42.39:0,42,1172	0/0:22,0:22:66.20:0,66,1250	1/1:0,10:10:30.10:477,30,0	1/1:0,30:30:84.29:1357,84,0	1/1:0,33:33:99:1505,99,0	0/0:24,0:24:72.16:0,72,1377	0/0:17,0:17:51.18:0,51,1015	0/0:21,0:21:63.22:0,63,1279	1/1:0,17:17:48.16:772,48,0	0/0:26,0:26:78.21:0,78,1505	1/1:1,9:10:27.09:440,27,0	0/0:20,0:20:60.19:0,60,1156	0/0:33,0:33:99:0,99,1920	0/0:37,0:37:99:0,111,2207	1/1:2,11:13:36.11:557,36,0	0/0:22,0:22:66.22:0,66,1267	0/0:17,0:17:51.18:0,51,1025	1/1:0,21:21:60.01:826,60,0	1/1:0,6:6:15.04:244,15,0	0/0:21,0:21:63.19:0,63,1198	0/0:29,0:29:87.28:0,87,1711	0/0:18,0:18:54.19:0,54,1085	0/1:1,13:14:18.75:589,0,19	0/0:21,0:21:63.22:0,63,1254	1/1:0,9:9:27.09:440,27,0
chr10	88198054	.	G	GA	6369.92	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.535;DP=562;FS=59.351;HRun=0;HaplotypeScore=94.8373;InbreedingCoeff=0.9897;MQ=82.96;MQ0=0;MQRankSum=-9.218;QD=40.06;ReadPosRankSum=0.400;VQSLOD=-0.1470;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:19:42.06:637,42,0	0/0:12,0:12:36.07:0,36,480	0/0:25,0:25:66.98:0,67,803	0/0:16,0:16:45.08:0,45,496	0/0:28,0:28:84.27:0,84,1157	1/1:0,16:16:42.08:638,42,0	1/1:0,16:16:42.14:669,42,0	1/1:0,13:11:33.04:471,33,0	0/0:31,0:31:90.29:0,90,1240	0/0:26,0:26:78.23:0,78,1071	0/0:21,0:21:63.19:0,63,848	1/1:0,9:9:24.08:383,24,0	0/0:28,0:28:84.26:0,84,1149	1/1:1,7:8:18.06:287,18,0	0/0:27,0:27:81.23:0,81,1095	0/0:26,0:26:78.26:0,78,1083	0/0:29,0:29:87.28:0,87,1198	1/1:0,13:13:39.13:623,39,0	0/0:24,0:24:66.22:0,66,922	0/0:24,0:24:72.24:0,72,1002	1/1:0,19:19:51.09:783,51,0	1/1:0,21:21:57.13:878,57,0	0/0:20,0:20:60.17:0,60,792	0/0:34,0:34:99:0,102,1390	0/0:11,0:11:33.11:0,33,461	1/1:2,16:18:9.17:694,9,0	0/0:21,0:21:63.21:0,63,880	1/1:1,6:7:21.02:306,21,0
chr10	88198622	.	GT	G	8300.88	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=18.256;DP=736;FS=5.843;HRun=9;HaplotypeScore=98.9790;InbreedingCoeff=0.9994;MQ=63.11;MQ0=3;MQRankSum=-1.365;QD=22.02;ReadPosRankSum=2.305;VQSLOD=5.2513;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,42:48:99:980,108,0	0/0:13,0:13:33.06:0,33,360	0/0:23,0:19:33.08:0,33,358	0/0:17,0:16:30.77:0,31,323	0/0:26,0:26:72.20:0,72,821	1/1:4,24:28:69.03:631,69,0	1/1:3,21:24:57.03:522,57,0	1/1:5,27:30:65.92:590,66,0	0/0:29,0:29:81.21:0,81,907	0/0:35,0:35:96.27:0,96,1098	0/0:23,1:24:41.73:0,42,726	1/1:2,15:17:45.02:411,45,0	0/0:31,0:31:84.23:0,84,954	1/1:1,11:12:30.01:274,30,0	0/0:32,0:32:84.23:0,84,950	0/0:30,0:30:75.21:0,75,856	0/0:36,0:36:96.26:0,96,1090	1/1:0,31:31:84.05:768,84,0	1/1:5,17:22:50.98:452,51,0	1/1:5,20:26:22.36:451,22,0	1/1:4,31:35:81.03:741,81,0	1/1:2,19:21:56.40:502,56,0	0/0:23,0:23:63.16:0,63,704	0/0:20,0:20:57.16:0,57,649	0/0:19,0:19:48.14:0,48,554	1/1:0,27:27:81.04:741,81,0	1/1:3,26:29:63.03:576,63,0	1/1:0,24:25:72.04:659,72,0
chr10	88199110	.	T	TC	8818.27	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=16.766;DP=528;FS=4.410;HRun=0;HaplotypeScore=116.3716;InbreedingCoeff=0.9794;MQ=56.07;MQ0=2;MQRankSum=-7.674;QD=36.74;ReadPosRankSum=0.688;VQSLOD=4.2630;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,19:25:46.64:852,47,0	0/0:7,0:7:21.06:0,21,278	0/0:14,0:12:33.07:0,33,439	0/0:14,0:13:17.52:0,18,189	0/0:24,0:24:66.18:0,66,871	1/1:1,16:17:51.15:722,51,0	1/1:0,12:12:33.11:479,33,0	1/1:0,28:27:81.24:1126,81,0	0/0:21,0:21:60.10:0,60,708	0/0:28,0:28:78.18:0,78,994	0/0:18,0:18:54.14:0,54,693	1/1:1,8:9:27.08:370,27,0	0/0:15,0:15:42.12:0,42,554	1/1:2,8:10:26.81:357,27,0	0/0:20,0:20:60.16:0,60,763	0/0:23,0:23:69.23:0,69,964	0/0:33,0:33:96.26:0,96,1287	1/1:1,21:22:57.17:830,57,0	1/1:1,11:11:30.02:368,30,0	1/1:2,21:23:69.06:947,69,0	1/1:1,16:17:33.10:464,33,0	1/1:1,18:19:51.01:675,51,0	0/0:11,0:11:30.08:0,30,386	0/0:37,0:37:99:0,111,1499	0/0:23,0:23:61.81:0,62,915	1/1:3,14:17:6.11:591,6,0	1/1:3,19:22:65.99:864,66,0	1/1:1,6:6:12.04:175,12,0
chr10	88199178	.	TA	T	6803.30	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=15.514;DP=465;FS=1.140;HRun=2;HaplotypeScore=124.9344;InbreedingCoeff=0.9834;MQ=74.31;MQ0=0;MQRankSum=-10.562;QD=33.35;ReadPosRankSum=-0.275;VQSLOD=4.3247;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:57.14:717,57,0	0/0:6,0:6:17:0,17,93	0/0:23,0:22:54.48:0,54,617	0/0:18,1:19:11.04:0,11,542	0/0:23,0:23:42.25:0,42,325	1/1:0,23:23:66.21:854,66,0	1/1:0,10:10:30.10:388,30,0	1/1:1,13:16:39.02:465,39,0	0/0:22,0:22:61.60:0,62,304	0/0:18,0:18:45.96:0,46,210	0/0:21,0:21:33.25:0,33,302	1/1:1,12:13:30.10:388,30,0	0/0:16,0:16:44.52:0,45,237	1/1:0,11:11:32.99:387,33,0	0/0:15,0:15:40.29:0,40,200	0/0:16,0:16:17.46:0,17,157	0/0:31,0:31:61.12:0,61,392	1/1:0,10:11:33.01:389,33,0	1/1:0,10:10:27.09:346,27,0	1/1:0,16:16:39.13:504,39,0	1/1:0,11:11:23.35:309,23,0	1/1:0,17:18:45.15:581,45,0	0/0:17,0:17:42.94:0,43,235	0/0:20,0:20:56.27:0,56,282	0/0:14,0:14:42.14:0,42,620	1/1:1,13:14:29.47:472,29,0	1/1:0,25:25:69.22:886,69,0	1/1:0,4:4:9.03:117,9,0
chr10	88200332	.	AG	A	2588.21	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.485;DP=527;FS=5.997;HRun=2;HaplotypeScore=57.8131;InbreedingCoeff=0.9899;MQ=83.42;MQ0=0;MQRankSum=-1.289;QD=34.51;ReadPosRankSum=0.907;VQSLOD=3.8693;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1525	0/0:8,0:8:24.08:0,24,360	0/0:18,0:18:53.94:0,54,709	0/0:21,0:21:60.16:0,60,814	0/0:19,0:19:57.18:0,57,832	0/0:11,0:11:33.10:0,33,476	0/0:24,0:24:72.23:0,72,1058	1/1:1,13:14:39.13:506,39,0	0/0:25,0:25:72.24:0,72,1078	0/0:14,0:13:39.06:0,39,535	0/0:11,0:11:33.11:0,33,489	0/0:11,0:11:33.11:0,33,492	0/0:12,0:12:30.10:0,30,450	0/0:11,0:11:33.11:0,33,494	0/0:17,0:17:51.17:0,51,762	0/0:15,0:15:42.14:0,42,629	0/0:30,0:30:90.21:0,90,1293	0/0:22,0:22:66.22:0,66,987	0/0:22,0:21:63.20:0,63,921	0/0:23,0:22:69.21:0,69,1000	1/1:1,46:47:99:1710,132,0	0/0:17,0:17:48.16:0,48,719	0/0:12,0:12:27.08:0,27,386	0/0:36,0:36:99:0,108,1572	0/0:17,0:17:51.17:0,51,762	1/1:0,10:10:30.08:374,30,0	0/0:22,0:22:63.19:0,63,897	1/1:0,4:4:12.04:155,12,0
chr10	88200435	.	CCCCCA	C	1153.01	PASS	AB=1.000;AC=7;AF=0.135;AN=52;BaseQRankSum=3.244;DP=210;FS=39.642;HRun=0;HaplotypeScore=53.5314;InbreedingCoeff=0.6169;MQ=71.73;MQ0=1;MQRankSum=-4.495;QD=31.16;ReadPosRankSum=-1.458;VQSLOD=1.4749;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:9.02:0,9,227	0/0:4,0:4:9.02:0,9,135	0/0:16,0:11:17.26:0,17,329	0/0:18,0:13:21.57:0,22,466	0/0:3,0:3:5.83:0,6,124	0/0:5,0:5:12.02:0,12,288	0/0:13,0:13:36.09:0,36,823	0/0:6,0:6:12.03:0,12,240	0/0:3,0:3:9.03:0,9,183	0/0:4,0:3:9.03:0,9,178	0/0:6,0:6:9.03:0,9,211	0/1:2,0:2:8.97:9,0,19	0/0:6,0:6:15.03:0,15,215	0/0:2,0:2:6.02:0,6,146	0/0:8,0:8:9.03:0,9,187	0/0:8,0:8:21.54:0,22,404	0/0:13,0:13:10.19:0,10,513	0/0:3,0:3:9.03:0,9,266	1/1:1,13:14:36.09:640,36,0	1/1:0,6:5:5.97:81,6,0	0/0:15,0:15:35.63:0,36,931	0/0:10,0:10:24.54:0,25,614	./.	0/0:14,0:14:29.39:0,29,433	0/0:6,0:6:18.06:0,18,487	0/0:3,0:3:9.03:0,9,256	1/1:0,15:15:27:558,27,0	./.
chr10	88200447	.	CT	C	1196.80	PASS	AC=20;AF=0.385;AN=52;BaseQRankSum=-4.681;DP=197;FS=47.783;HRun=1;HaplotypeScore=46.9906;InbreedingCoeff=0.8172;MQ=73.41;MQ0=1;MQRankSum=1.007;QD=21.76;ReadPosRankSum=1.397;VQSLOD=0.8781;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:18.02:0,18,220	1/1:0,3:3:6.02:76,6,0	0/0:15,0:10:21.39:0,21,243	0/0:20,0:14:21.65:0,22,264	1/1:0,2:2:6.02:77,6,0	0/0:5,0:5:11.25:0,11,138	0/0:8,0:8:23.97:0,24,300	0/0:4,0:4:8.97:0,9,102	1/1:0,4:4:9.03:126,9,0	1/1:0,5:5:11.97:143,12,0	1/1:0,3:3:6.02:84,6,0	0/0:2,0:2:3.01:0,3,39	1/1:1,2:3:9.02:108,9,0	0/0:4,0:4:6.01:0,6,84	1/1:0,6:6:9.03:119,9,0	1/1:0,8:8:18.06:244,18,0	1/1:0,12:12:18.06:244,18,0	0/0:4,0:4:12.01:0,12,152	0/0:12,0:12:31.55:0,32,186	0/0:5,0:4:2.80:0,3,13	0/0:14,0:14:42.10:0,42,530	0/0:10,0:10:21.01:0,21,285	./.	1/1:0,9:9:12.04:167,12,0	0/0:7,0:7:17.99:0,18,224	0/0:7,0:7:21.05:0,21,254	0/0:18,0:18:35.01:0,35,228	./.
chr10	88200506	.	ACCCATGC	A	2935.58	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.602;DP=329;FS=1.677;HRun=0;HaplotypeScore=93.4034;InbreedingCoeff=0.9311;MQ=81.28;MQ0=0;MQRankSum=-9.448;QD=56.45;ReadPosRankSum=-0.061;VQSLOD=3.2605;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:70.12:0,70,2717	0/0:5,0:5:15.05:0,15,599	0/0:19,0:18:51.17:0,51,1670	0/0:17,0:17:45.15:0,45,1753	0/0:9,0:9:27.09:0,27,1056	1/1:0,5:5:12.04:311,12,0	1/1:3,17:20:48.16:1246,48,0	0/0:13,0:13:39.13:0,39,1523	0/0:13,0:13:36.12:0,36,1438	0/0:14,0:14:42.14:0,42,1673	0/0:8,0:8:18.06:0,18,720	1/1:0,7:7:18.06:467,18,0	0/0:6,0:6:15.05:0,15,598	1/1:1,8:9:24.08:622,24,0	0/0:2,0:2:6.02:0,6,240	0/0:9,0:9:21.07:0,21,839	0/0:13,0:13:33.11:0,33,1320	1/1:2,4:6:9.03:234,9,0	0/0:16,0:16:42.14:0,42,1656	0/0:9,0:9:24.08:0,24,922	0/0:19,0:19:57.20:0,57,2259	1/1:1,4:5:9.03:234,9,0	0/0:11,0:11:33.11:0,33,1300	0/0:16,0:16:39.13:0,39,1534	0/0:10,0:10:30.10:0,30,1199	0/0:15,0:15:45.15:0,45,1755	0/0:25,0:25:66.23:0,66,2616	0/0:4,0:4:12.04:0,12,479
chr10	88200812	.	TCTCCTTCTC	T	1600.38	PASS	AB=0.969;AC=39;AF=0.813;AN=48;BaseQRankSum=3.242;DP=436;FS=5.781;HRun=0;HaplotypeScore=67.4286;InbreedingCoeff=-0.0765;MQ=30.53;MQ0=133;MQRankSum=-0.065;QD=4.06;ReadPosRankSum=-1.323;VQSLOD=0.8369;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:14:47.93:76,0,48	1/1:8,0:4:6:53,6,0	./.	./.	1/1:18,0:14:20.88:177,21,0	0/1:17,0:11:28.23:50,0,28	0/1:17,0:10:9.60:10,0,38	0/1:21,8:15:24.96:236,0,25	1/1:20,0:18:8.93:70,9,0	1/1:18,0:16:30.48:266,30,0	1/1:11,0:7:5.90:43,6,0	1/1:8,0:1:2.98:22,3,0	1/1:22,0:15:5.96:43,6,0	./.	1/1:12,0:11:2.97:20,3,0	1/1:24,0:19:2.66:20,3,0	0/1:18,0:6:11.37:24,0,11	0/1:21,0:7:7.66:32,0,8	1/1:7,0:4:9.42:88,9,0	1/1:10,0:4:2.22:7,2,0	0/1:19,0:10:63.28:63,0,64	./.	1/1:11,0:5:5.95:42,6,0	1/1:33,0:19:11.53:99,12,0	0/0:30,0:19:39.08:0,39,632	1/1:25,0:14:3.10:142,3,0	1/1:9,0:7:3.01:38,3,0	1/1:14,0:6:11.62:115,12,0
chr10	88200815	.	CCTT	C	831.71	PASS	AB=0.987;AC=30;AF=0.625;AN=48;BaseQRankSum=4.648;DP=431;FS=9.308;HRun=0;HaplotypeScore=52.6159;InbreedingCoeff=0.1313;MQ=31.16;MQ0=128;MQRankSum=1.120;QD=2.52;ReadPosRankSum=1.394;VQSLOD=0.2573;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:14:8.67:0,9,78	1/1:7,0:4:6.01:59,6,0	./.	./.	1/1:18,0:14:20.83:151,21,0	1/1:17,0:11:9.74:46,10,0	1/1:17,0:10:15.74:80,16,0	0/1:26,0:15:30.26:30,0,77	0/1:20,0:18:2.86:56,0,3	1/1:19,0:17:16.62:249,17,0	1/1:11,0:7:5.94:41,6,0	1/1:8,0:1:2.97:20,3,0	1/1:20,0:13:5.96:44,6,0	./.	1/1:11,0:10:2.98:21,3,0	1/1:24,0:20:0.16:17,0,0	0/1:15,0:4:21.79:22,0,32	0/1:21,0:7:22.12:22,0,32	0/0:7,0:4:7.12:0,7,35	0/0:10,0:4:1.67:0,2,18	0/0:20,0:11:5.42:0,5,73	./.	1/1:12,0:6:5.94:41,6,0	0/1:37,0:23:6.77:32,0,7	0/0:29,0:18:42.09:0,42,627	0/1:24,1:14:31.96:32,0,120	0/1:8,0:6:7.91:12,0,8	0/1:13,1:6:2.88:6,0,3
chr10	88200818	.	TCTC	T	2006.79	PASS	AB=0.959;AC=37;AF=0.771;AN=48;BaseQRankSum=2.311;DP=433;FS=8.926;HRun=0;HaplotypeScore=49.9474;InbreedingCoeff=0.1759;MQ=31.72;MQ0=126;MQRankSum=1.630;QD=5.65;ReadPosRankSum=-0.839;VQSLOD=0.0440;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:15:11.59:12,0,103	1/1:7,0:4:6.02:87,6,0	./.	./.	1/1:19,0:15:21.07:316,21,0	0/1:17,0:11:16.96:17,0,31	0/0:17,0:10:7.72:0,8,47	0/1:25,0:15:40.39:182,0,40	1/1:20,0:18:9.03:136,9,0	1/1:20,0:18:36:525,36,0	1/1:11,0:7:6.02:81,6,0	1/1:7,0:1:0.89:2,1,0	1/1:18,0:13:6.02:90,6,0	./.	1/1:11,0:10:3.01:45,3,0	1/1:23,0:19:3.01:45,3,0	0/1:13,3:5:15.59:42,0,16	0/0:21,0:7:6.04:0,6,55	1/1:8,0:4:4.83:47,5,0	1/1:10,0:4:2.68:11,3,0	0/1:19,1:11:30.25:30,0,93	./.	1/1:12,0:6:6.02:90,6,0	1/1:39,0:25:9.43:108,9,0	0/0:28,0:17:39.13:0,39,792	1/1:25,2:16:20.74:206,21,0	1/1:2,5:5:3:27,3,0	1/1:14,0:6:7.93:55,8,0
chr10	88200821	.	C	CCTT	2369.02	PASS	AB=1.000;AC=30;AF=0.625;AN=48;BaseQRankSum=-0.463;DP=429;FS=3.103;HRun=0;HaplotypeScore=50.1385;InbreedingCoeff=0.4561;MQ=33.57;MQ0=118;MQRankSum=2.152;QD=8.03;ReadPosRankSum=-0.803;VQSLOD=2.0242;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:15:15.45:0,15,114	1/1:3,4:5:6.02:118,6,0	./.	./.	1/1:4,15:16:21.07:459,21,0	0/0:17,0:11:11.56:0,12,51	0/0:15,0:9:13.72:0,14,98	0/1:23,0:15:21.07:184,0,21	1/1:1,18:18:9.03:192,9,0	1/1:3,15:18:38.76:669,39,0	1/1:4,8:10:6.02:110,6,0	0/0:7,0:1:2.90:0,3,16	1/1:4,13:14:6.02:132,6,0	./.	1/1:2,11:12:3.01:67,3,0	1/1:4,18:19:3.01:67,3,0	0/1:16,0:5:30.21:42,0,30	0/0:21,0:7:13.76:0,14,78	1/1:7,0:3:0.18:11,0,0	0/0:10,0:4:2.04:0,2,6	0/1:19,0:10:2.29:2,0,90	./.	1/1:8,4:6:6.02:132,6,0	1/1:19,18:26:10.46:147,10,0	0/0:29,0:18:42.14:0,42,684	1/1:25,0:15:17.27:188,17,0	1/1:7,0:5:2.22:7,2,0	0/1:14,0:6:1.03:1,0,1
chr10	88200836	.	CCTT	C	201.05	PASS	AB=1.000;AC=17;AF=0.327;AN=52;BaseQRankSum=1.590;DP=409;FS=7.745;HRun=0;HaplotypeScore=57.4850;InbreedingCoeff=0.3872;MQ=38.95;MQ0=81;MQRankSum=-4.915;QD=1.58;ReadPosRankSum=-1.150;VQSLOD=0.1234;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:14:7.44:7,0,70	0/0:8,0:7:14.98:0,15,171	0/0:3,0:1:3.01:0,3,39	./.	0/0:18,0:18:27.07:0,27,491	1/1:8,4:8:9:89,9,0	1/1:10,0:6:7.01:32,7,0	0/0:18,0:14:13.91:0,14,120	0/0:21,0:19:15.02:0,15,231	0/0:17,0:16:33.52:0,34,519	0/0:16,0:14:24.05:0,24,369	1/1:8,0:2:2.97:20,3,0	0/0:19,0:17:15.05:0,15,266	1/1:8,0:2:1.55:4,2,0	0/0:18,0:18:21.01:0,21,266	0/0:25,0:24:21.05:0,21,310	0/0:13,0:8:11.99:0,12,231	0/1:16,0:8:36.39:36,0,38	0/1:6,0:2:1.17:1,0,6	1/1:5,0:2:3.01:46,3,0	0/0:17,0:10:9.34:0,9,60	./.	0/0:12,0:8:14.80:0,15,259	0/0:44,0:33:38.78:0,39,567	0/0:28,0:19:42.03:0,42,780	0/1:25,0:15:82.47:90,0,82	1/1:6,0:5:1.82:5,2,0	0/1:16,0:8:10.96:19,0,11
chr10	88200858	.	TTCCTCCTCC	T	1507.46	PASS	AB=0.917;AC=17;AF=0.304;AN=56;BaseQRankSum=0.639;DP=406;FS=2.775;HRun=0;HaplotypeScore=100.9349;InbreedingCoeff=0.4194;MQ=52.03;MQ0=39;MQRankSum=-2.248;QD=12.16;ReadPosRankSum=-2.925;VQSLOD=1.7475;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:4,9:14:20.74:80,0,21	0/0:12,0:12:32.98:0,33,714	0/0:11,0:6:18.06:0,18,473	0/0:12,0:9:25.33:0,25,646	0/0:19,0:19:39.13:0,39,1360	1/1:13,0:11:24.04:322,24,0	1/1:14,0:12:29.88:316,30,0	1/1:12,0:11:14.71:155,15,0	0/0:24,0:21:36.55:0,37,1104	0/0:16,0:16:42.06:0,42,1220	0/0:20,0:20:42.14:0,42,1229	1/1:6,0:2:3:28,3,0	0/0:21,0:20:36.12:0,36,1076	1/1:8,0:6:4.05:153,4,0	0/0:22,0:22:42.08:0,42,1317	0/0:22,0:22:39.13:0,39,1145	0/0:14,0:12:33.11:0,33,820	0/1:12,0:8:48.65:141,0,49	0/0:5,0:1:2.98:0,3,21	0/0:5,0:4:2.58:0,3,10	0/1:12,0:10:20.34:160,0,20	1/1:4,0:3:6.02:76,6,0	0/0:15,0:14:35.79:0,36,921	0/0:40,0:35:51.02:0,51,1563	0/0:19,0:15:39.12:0,39,1390	0/1:22,0:19:99:193,0,190	0/0:5,0:5:0.79:0,1,20	0/1:7,0:6:44.35:60,0,44
chr10	88200867	.	C	CTCT	1826.66	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=1.365;DP=419;FS=6.390;HRun=0;HaplotypeScore=75.3830;InbreedingCoeff=0.8071;MQ=59.56;MQ0=20;MQRankSum=-0.939;QD=15.61;ReadPosRankSum=-1.292;VQSLOD=2.5506;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:5.01:0,5,50	0/0:12,0:12:29.87:0,30,242	0/0:13,0:8:23.92:0,24,318	0/0:14,0:11:19.39:0,19,402	0/0:22,0:22:48.12:0,48,733	1/1:12,0:11:23.83:235,24,0	1/1:15,0:13:32.23:297,32,0	1/1:11,0:11:29.17:239,29,0	0/0:26,0:25:50.57:0,51,698	0/0:19,0:19:53.44:0,53,369	0/0:20,0:20:47.76:0,48,383	1/1:8,0:4:8.95:70,9,0	0/0:21,0:20:36.12:0,36,599	1/1:8,0:6:14:135,14,0	0/0:23,0:23:45.07:0,45,706	0/0:22,0:22:44.91:0,45,652	0/0:15,0:14:38.92:0,39,327	1/1:10,0:9:5.04:160,5,0	0/0:7,0:3:8.99:0,9,77	0/1:6,0:6:3.47:3,0,42	1/1:11,0:10:22.47:170,22,0	1/1:7,0:6:11.97:121,12,0	0/0:18,0:18:41.83:0,42,565	0/0:39,0:37:56.92:0,57,810	0/0:15,0:15:42.06:0,42,603	1/1:6,18:22:17.14:487,17,0	0/0:5,0:5:10.74:0,11,83	0/1:5,0:5:7.63:114,0,8
chr10	88201006	.	AC	A	986.68	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.667;DP=465;FS=0.000;HRun=2;HaplotypeScore=62.1902;InbreedingCoeff=0.9908;MQ=60.13;MQ0=4;MQRankSum=-1.021;QD=30.83;ReadPosRankSum=-1.264;VQSLOD=2.7763;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:42.10:0,42,604	0/0:8,0:8:21.03:0,21,290	0/0:27,0:24:69.11:0,69,934	0/0:22,0:20:57.13:0,57,726	0/0:15,0:15:36.11:0,36,519	0/0:15,0:14:30.10:0,30,447	0/0:19,0:19:54.18:0,54,807	0/0:21,0:20:57.19:0,57,854	0/0:26,0:26:72.24:0,72,1076	0/0:19,0:18:51.17:0,51,763	0/0:12,0:11:33.11:0,33,494	0/0:12,0:12:36.12:0,36,535	0/0:17,0:17:48.16:0,48,717	0/0:16,0:16:48.08:0,48,667	0/0:17,0:17:45.15:0,45,673	0/0:13,0:12:33.11:0,33,492	0/0:25,0:25:69.23:0,69,1033	0/0:13,0:12:36.09:0,36,516	1/1:0,13:12:36.12:467,36,0	1/1:0,10:10:27.09:351,27,0	0/0:32,0:32:90.29:0,90,1328	0/0:5,0:5:15.05:0,15,224	0/0:13,0:13:39.13:0,39,582	0/0:29,0:29:75.25:0,75,1118	0/0:12,0:12:33.11:0,33,492	0/0:17,0:17:48.16:0,48,718	1/1:0,9:9:24.08:311,24,0	0/0:10,0:10:27.09:0,27,404
chr10	88201129	.	T	TGC	331.42	PASS	AC=26;AF=0.929;AN=28;BaseQRankSum=0.306;DP=28;FS=0.000;HRun=0;HaplotypeScore=13.3860;InbreedingCoeff=0.0528;MQ=93.89;MQ0=0;MQRankSum=-1.531;QD=13.81;ReadPosRankSum=0.510;VQSLOD=2.9775;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,1:1:3:26,3,0	1/1:4,0:4:4.30:16,4,0	0/0:1,0:1:3:0,3,28	1/1:0,1:1:2.99:24,3,0	./.	./.	./.	./.	./.	1/1:2,0:2:6.01:76,6,0	1/1:0,1:1:3:29,3,0	1/1:1,2:2:2.99:24,3,0	./.	1/1:1,0:1:3:25,3,0	./.	1/1:1,1:2:2.98:22,3,0	1/1:0,1:1:3.01:32,3,0	1/1:1,2:3:5.96:52,6,0	./.	./.	./.	1/1:2,0:2:2.99:24,3,0	./.	1/1:1,1:2:2.92:17,3,0	./.	1/1:1,0:1:3.01:46,3,0	./.
chr10	88201758	.	TTTTTG	T	1909.96	PASS	AB=0.976;AC=27;AF=0.482;AN=56;BaseQRankSum=-4.284;DP=343;FS=3.209;HRun=0;HaplotypeScore=79.7593;InbreedingCoeff=0.4165;MQ=65.80;MQ0=5;MQRankSum=-1.847;QD=11.58;ReadPosRankSum=-4.778;VQSLOD=0.1941;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:46.84:412,47,0	0/0:2,0:2:6.01:0,6,64	0/0:41,0:10:18:0,18,148	0/0:39,0:17:28.01:0,28,221	0/1:16,0:16:77.30:81,0,77	1/1:0,5:5:2.96:19,3,0	1/1:5,0:5:11.75:114,12,0	1/1:19,0:18:32.72:299,33,0	0/0:5,0:4:3.24:0,3,95	0/0:14,0:13:21.57:0,22,392	0/1:8,0:6:1.69:2,0,67	1/1:4,0:4:11.78:97,12,0	0/1:9,0:9:4.29:4,0,113	1/1:8,0:8:20.70:169,21,0	0/0:9,0:7:15:0,15,153	0/0:10,0:9:20.79:0,21,227	0/0:19,0:17:15.83:0,16,247	1/1:8,0:7:8.10:59,8,0	0/0:14,0:14:2.34:0,2,225	0/0:9,0:9:15.02:0,15,157	1/1:8,0:8:0.87:109,1,0	1/1:3,0:3:5.97:47,6,0	0/1:10,0:10:23.06:23,0,96	0/1:7,0:7:0.78:1,0,32	0/0:16,0:16:38.75:0,39,599	1/1:16,1:17:44.86:411,45,0	0/1:8,0:7:19.14:19,0,55	0/1:8,2:10:22.50:229,0,23
chr10	88201762	.	TG	T	3200.40	PASS	AB=1.000;AC=52;AF=0.929;AN=56;BaseQRankSum=-2.545;DP=348;FS=1.769;HRun=1;HaplotypeScore=60.1826;InbreedingCoeff=0.2856;MQ=62.24;MQ0=5;MQRankSum=-3.062;QD=10.29;ReadPosRankSum=-0.947;VQSLOD=1.1600;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,2:20:47.37:359,47,0	1/1:2,0:2:5.92:41,6,0	0/1:44,0:10:19.31:33,0,19	0/0:37,0:15:21.85:0,22,139	1/1:16,0:15:28.51:169,29,0	1/1:5,0:5:2.92:17,3,0	1/1:4,1:5:11.84:91,12,0	1/1:1,18:18:43.44:323,43,0	1/1:5,0:4:8.98:42,9,0	1/1:14,0:13:27.15:117,27,0	1/1:8,0:6:10.24:46,10,0	1/1:3,1:5:13.01:81,13,0	1/1:8,0:8:20.74:121,21,0	1/1:8,1:9:23.20:156,23,0	1/1:9,0:7:12.34:60,12,0	1/1:9,1:9:17.33:72,17,0	1/1:19,0:17:23.54:125,24,0	1/1:7,0:5:11.83:82,12,0	1/1:12,1:13:35.14:228,35,0	1/1:2,7:9:8.34:44,8,0	1/1:5,3:8:11.77:101,12,0	1/1:3,0:3:5.97:47,6,0	1/1:10,0:10:22.37:131,22,0	1/1:7,0:7:5.68:29,6,0	0/1:17,0:17:45.39:45,0,80	1/1:16,1:17:47.82:388,48,0	1/1:8,0:7:17.66:115,18,0	1/1:14,0:14:29.89:261,30,0
chr10	88201769	.	TTTTTG	T	1383.75	PASS	AB=0.978;AC=28;AF=0.500;AN=56;BaseQRankSum=-2.407;DP=358;FS=16.425;HRun=0;HaplotypeScore=85.4819;InbreedingCoeff=0.2350;MQ=60.05;MQ0=11;MQRankSum=-1.441;QD=6.95;ReadPosRankSum=-4.253;VQSLOD=-0.6479;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:16:34.28:276,34,0	0/1:3,0:3:10.86:11,0,70	0/0:44,0:10:18.04:0,18,265	0/0:35,0:13:29.37:0,29,294	0/1:17,0:16:23.89:24,0,128	1/1:5,0:5:2.94:18,3,0	1/1:6,0:5:8.89:80,9,0	1/1:16,1:16:15.13:239,15,0	0/0:5,0:4:7.78:0,8,115	0/0:16,0:14:36.54:0,37,464	0/0:10,0:8:8.40:0,8,103	1/1:7,0:7:14.76:102,15,0	0/0:7,0:6:15.04:0,15,183	1/1:10,0:10:15.03:98,15,0	0/1:10,0:8:2.81:3,0,163	0/1:17,0:15:46.38:46,0,230	0/0:19,0:17:12.25:0,12,313	1/1:5,0:3:5.94:41,6,0	0/1:15,0:15:7.75:8,0,314	0/1:11,0:11:18.70:19,0,183	0/1:5,2:7:11.91:76,0,12	1/1:5,0:5:5.92:39,6,0	0/1:9,0:9:2.72:3,0,127	0/0:6,0:6:3.01:0,3,45	0/0:17,0:17:15.08:0,15,507	1/1:11,1:12:29.79:254,30,0	0/1:11,0:10:54.86:55,0,70	0/1:14,0:14:28.38:179,0,28
chr10	88201890	.	TCTCCTAAC	T	2846.56	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.523;DP=572;FS=0.610;HRun=0;HaplotypeScore=153.9913;InbreedingCoeff=0.9960;MQ=85.76;MQ0=0;MQRankSum=-8.826;QD=61.88;ReadPosRankSum=-1.562;VQSLOD=3.4365;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,4519	0/0:6,0:6:18.06:0,18,727	0/0:21,0:22:60.17:0,60,2118	0/0:20,0:20:34.67:0,35,1812	0/0:24,0:24:72.25:0,72,3056	0/0:16,0:16:45.15:0,45,1898	0/0:19,0:19:51.15:0,51,2017	0/0:20,0:19:54.14:0,54,2057	0/0:22,0:21:63.22:0,63,2633	0/0:14,0:14:42.13:0,42,1732	0/0:17,0:17:51.18:0,51,2151	0/0:13,0:13:36.12:0,36,1402	0/0:21,0:21:63.22:0,63,2693	0/0:16,0:16:45.15:0,45,1913	0/0:20,0:18:48.15:0,48,1955	0/0:12,0:12:30.09:0,30,1155	0/0:38,0:37:93.30:0,93,3879	0/0:24,0:24:66.16:0,66,2530	1/1:4,7:11:24.05:561,24,0	1/1:2,18:20:51.17:1266,51,0	0/0:33,0:33:96.33:0,96,4187	0/0:21,0:21:63.20:0,63,2645	0/0:20,0:20:57.17:0,57,2163	0/0:33,0:33:84.23:0,84,3369	0/0:16,0:16:42.14:0,42,1752	0/0:27,0:27:81.27:0,81,3327	1/1:0,15:15:42.14:1162,42,0	0/0:12,0:12:36.12:0,36,1523
chr10	88201966	.	A	ATGTG	2005.81	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=10.215;DP=769;FS=12.429;HRun=0;HaplotypeScore=164.0497;InbreedingCoeff=0.8290;MQ=60.54;MQ0=4;MQRankSum=-9.052;QD=23.06;ReadPosRankSum=-0.493;VQSLOD=2.8719;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,123,2295	0/0:5,0:5:15.05:0,15,267	0/1:26,0:17:2.65:3,0,248	0/0:19,0:10:2.54:0,3,51	0/0:19,0:19:51.15:0,51,903	0/0:18,0:18:48.16:0,48,901	0/0:49,0:49:99:0,130,2419	0/0:19,0:19:57.19:0,57,1048	0/0:29,0:29:69.24:0,69,1318	0/0:21,0:21:57.20:0,57,1093	0/0:20,0:20:51.16:0,51,937	0/0:23,0:23:66.20:0,66,1195	0/0:21,0:21:54.19:0,54,1047	0/0:29,0:29:84.29:0,84,1618	0/0:25,0:24:63.22:0,63,1194	0/0:27,0:27:72.25:0,72,1377	0/0:38,0:38:99:0,102,1786	0/0:35,0:35:99:0,99,1831	1/1:11,7:18:22.75:795,23,0	1/1:11,14:25:38.75:786,39,0	0/0:77,0:77:99:0,202,3821	0/0:26,0:26:75.23:0,75,1376	0/0:25,0:24:72.25:0,72,1395	0/0:30,0:30:81.28:0,81,1540	0/0:18,0:18:45.14:0,45,829	0/0:35,0:35:99:0,99,1872	1/1:7,11:18:20.54:564,21,0	0/0:23,0:23:66.20:0,66,1242
chr10	88201967	.	TGCACACACTGC	T	1302.45	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.210;DP=766;FS=5.888;HRun=0;HaplotypeScore=259.7550;InbreedingCoeff=0.9549;MQ=60.44;MQ0=4;MQRankSum=-8.716;QD=21.71;ReadPosRankSum=-2.647;VQSLOD=1.2659;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,129,6944	0/0:6,0:6:18.06:0,18,957	0/0:27,0:18:29.92:0,30,818	0/0:21,0:10:9.97:0,10,148	0/0:19,0:19:54.17:0,54,2788	0/0:18,0:18:48.16:0,48,2711	0/0:48,0:48:99:0,132,6949	0/0:20,0:20:60.21:0,60,3173	0/0:29,0:29:75.26:0,75,4064	0/0:19,0:19:57.20:0,57,3207	0/0:20,0:20:54.19:0,54,2960	0/0:23,0:23:66.23:0,66,3619	0/0:19,0:19:54.19:0,54,2964	0/0:29,0:29:84.29:0,84,4733	0/0:25,0:24:63.22:0,63,3423	0/0:27,0:27:72.25:0,72,4152	0/0:38,0:38:99:0,102,5446	0/0:35,0:35:99:0,102,5511	1/1:16,2:18:9.02:234,9,0	1/1:20,4:24:44.13:831,44,0	0/0:76,0:76:99:0,217,11795	0/0:27,0:27:78.25:0,78,4082	0/0:25,0:24:72.25:0,72,3901	0/0:30,0:30:81.28:0,81,4462	0/0:19,0:19:51.17:0,51,2820	0/0:35,0:35:99:0,99,5252	1/1:17,1:18:16.58:373,17,0	0/0:23,0:23:69.21:0,69,3724
chr10	88202892	.	TG	T	1255.91	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.181;DP=362;FS=0.000;HRun=2;HaplotypeScore=46.4236;InbreedingCoeff=0.9441;MQ=68.87;MQ0=0;MQRankSum=-0.241;QD=31.40;ReadPosRankSum=1.130;VQSLOD=3.0606;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.23:0,69,1026	0/0:4,0:4:12.04:0,12,180	0/0:17,0:17:44.91:0,45,641	0/0:13,0:13:36.12:0,36,535	0/0:16,0:16:48.15:0,48,695	0/0:18,0:18:54.18:0,54,807	0/0:19,0:19:57.09:0,57,781	0/0:17,0:17:48.11:0,48,693	0/0:15,0:15:42.14:0,42,627	0/0:6,0:6:18.06:0,18,269	0/0:9,0:9:27.09:0,27,403	0/0:14,0:14:42.14:0,42,628	0/0:7,0:7:21.07:0,21,315	0/0:11,0:11:33.11:0,33,494	0/0:7,0:7:21.07:0,21,314	0/0:7,0:7:21.07:0,21,314	0/0:18,0:18:48.16:0,48,718	0/0:13,0:13:39.05:0,39,533	1/1:1,9:10:27.09:350,27,0	1/1:0,10:10:24.08:309,24,0	0/0:14,0:14:24.04:0,24,334	0/0:12,0:12:36.12:0,36,538	0/0:14,0:14:42.13:0,42,610	0/0:16,0:16:42.14:0,42,628	0/0:10,0:10:27.09:0,27,404	0/0:17,0:17:48.14:0,48,678	1/1:0,20:20:57.19:739,57,0	0/0:2,0:2:6.02:0,6,90
chr10	88203621	.	C	CTGGCTCTTT	15660.93	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-5.525;DP=619;FS=7.379;HRun=0;HaplotypeScore=174.6159;InbreedingCoeff=0.9996;MQ=83.77;MQ0=0;MQRankSum=-15.037;QD=112.67;ReadPosRankSum=-0.725;VQSLOD=5.0500;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.30:0,93,2820	1/1:4,7:11:33.11:1465,33,0	0/0:20,0:20:57.20:0,57,1604	0/0:28,0:28:74.86:0,75,2007	0/0:25,0:25:72.25:0,72,2219	0/0:26,0:26:69.24:0,69,2137	0/0:30,0:31:93.24:0,93,2713	0/0:21,0:21:57.16:0,57,1526	0/0:20,0:20:60.21:0,60,1852	1/1:5,12:20:56.89:2331,57,0	1/1:7,10:18:42.10:1881,42,0	0/0:16,0:16:45.14:0,45,1256	0/0:19,0:19:51.17:0,51,1608	0/0:30,0:30:90.30:0,90,2659	0/0:19,0:19:54.19:0,54,1694	0/0:22,0:22:63.22:0,63,1992	1/1:8,17:32:65.90:3138,66,0	0/0:27,0:27:75.22:0,75,2225	1/1:7,9:18:51.16:2097,51,0	1/1:8,11:20:57.15:2086,57,0	0/0:32,0:32:96.29:0,96,2772	0/0:25,0:25:69.24:0,69,2133	0/0:17,0:17:51.18:0,51,1557	0/0:18,0:18:54.16:0,54,1542	0/0:19,0:19:51.17:0,51,1572	0/0:25,0:25:69.24:0,69,2179	1/1:7,12:20:57.20:2664,57,0	0/0:8,0:8:24.08:0,24,619
chr10	88203826	.	CCCCAAATCTGA	C	24519.52	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=15.418;DP=533;FS=2.944;HRun=0;HaplotypeScore=197.8775;InbreedingCoeff=0.9931;MQ=85.87;MQ0=0;MQRankSum=-15.397;QD=77.11;ReadPosRankSum=1.217;VQSLOD=4.9375;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,11:26:36.12:1117,36,0	0/0:8,0:8:24.08:0,24,1374	0/0:24,0:24:72.25:0,72,3503	0/0:25,0:25:57.20:0,57,2739	1/1:4,20:24:51.18:1699,51,0	1/1:4,19:23:60.19:1970,60,0	1/1:5,14:19:45.15:1431,45,0	1/1:6,26:32:75.22:2165,75,0	1/1:2,19:21:60.19:2003,60,0	0/0:32,0:31:90.31:0,90,4693	0/0:14,0:14:39.13:0,39,2085	1/1:1,13:14:39.13:1376,39,0	1/1:2,13:15:42.14:1450,42,0	1/1:6,15:21:57.15:1721,57,0	1/1:3,15:18:48.16:1658,48,0	1/1:1,14:15:45.15:1579,45,0	0/0:29,0:29:87.30:0,87,4857	1/1:6,5:11:15.05:493,15,0	0/0:21,0:21:60.21:0,60,3181	0/0:26,0:26:75.24:0,75,4093	1/1:6,7:13:21.07:709,21,0	1/1:3,17:20:57.20:1816,57,0	1/1:4,10:14:36.12:1130,36,0	1/1:6,7:13:18.06:566,18,0	0/0:15,0:15:42.14:0,42,2395	1/1:3,11:13:33.11:1164,33,0	0/0:21,0:20:63.22:0,63,3470	1/1:1,4:5:15.05:471,15,0
chr10	88203827	.	CCCAAATCTGA	C	16198.49	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=17.897;DP=520;FS=2.440;HRun=0;HaplotypeScore=212.6304;InbreedingCoeff=0.9930;MQ=85.11;MQ0=0;MQRankSum=-15.711;QD=52.76;ReadPosRankSum=1.640;VQSLOD=4.8281;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:36.12:709,36,0	0/0:8,0:8:24.08:0,24,1272	0/0:24,0:24:72.23:0,72,3271	0/0:23,0:23:60.19:0,60,2698	1/1:24,0:24:51.17:1121,51,0	1/1:23,0:23:57.20:1301,57,0	1/1:17,1:18:45.15:922,45,0	1/1:31,0:31:74.92:1437,75,0	1/1:21,0:21:57.20:1334,57,0	0/0:32,0:31:93.32:0,93,4500	0/0:14,0:14:39.13:0,39,1947	1/1:13,1:14:39.13:934,39,0	1/1:15,0:15:42.14:975,42,0	1/1:20,0:20:49.11:1105,49,0	1/1:17,1:18:48.16:1115,48,0	1/1:15,0:15:45.15:1076,45,0	0/0:30,0:30:90.31:0,90,4651	1/1:9,0:9:15.05:329,15,0	0/0:21,0:21:60.21:0,60,2946	0/0:25,0:25:75.24:0,75,3795	1/1:12,0:12:21.07:471,21,0	1/1:20,0:20:57.06:1176,57,0	1/1:14,0:14:35.95:729,36,0	1/1:13,0:13:18.06:374,18,0	0/0:15,0:15:42.14:0,42,2217	1/1:13,1:13:33.11:790,33,0	0/0:21,0:20:63.22:0,63,3216	1/1:5,0:5:14.88:301,15,0
chr10	88203890	.	G	GT	11051.77	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-4.548;DP=615;FS=3.278;HRun=7;HaplotypeScore=105.2490;InbreedingCoeff=0.9464;MQ=73.46;MQ0=0;MQRankSum=-3.309;QD=29.24;ReadPosRankSum=0.111;VQSLOD=4.2948;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:31:81.21:961,81,0	0/0:14,0:14:42.07:0,42,405	0/0:17,0:17:23.26:0,23,318	0/0:19,0:18:3.51:0,4,247	1/1:6,23:29:63.11:728,63,0	1/1:2,18:20:48.08:561,48,0	1/1:2,20:22:60.18:724,60,0	1/1:5,29:34:87.24:1028,87,0	1/1:4,15:19:48.14:570,48,0	0/0:41,0:41:99:0,105,1013	0/0:18,0:18:51.08:0,51,491	1/1:2,18:20:51.16:616,51,0	1/1:2,14:16:39.12:470,39,0	1/1:2,20:22:60.18:724,60,0	1/1:1,17:18:51.16:616,51,0	1/1:7,14:21:42.13:507,42,0	0/0:28,0:28:69.10:0,69,666	1/1:0,11:11:30.09:362,30,0	0/0:32,0:31:81.10:0,81,776	0/0:19,0:19:51.08:0,51,492	1/1:2,19:21:45.05:524,45,0	1/1:4,22:26:66.08:761,66,0	1/1:3,12:15:36.11:435,36,0	1/1:2,13:15:36.11:435,36,0	0/0:19,0:19:51.08:0,51,492	1/1:6,20:26:2.22:594,2,0	0/0:30,0:30:75.12:0,75,724	1/1:0,12:12:36.11:435,36,0
chr10	88205545	.	CG	C	17488.41	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=0.130;DP=550;FS=14.265;HRun=3;HaplotypeScore=58.6060;InbreedingCoeff=0.9885;MQ=85.04;MQ0=0;MQRankSum=-6.284;QD=34.91;ReadPosRankSum=4.565;VQSLOD=3.9668;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:84.26:1041,84,0	1/1:0,4:4:12.04:149,12,0	0/0:17,0:17:40.57:0,41,558	0/0:17,0:17:41.88:0,42,579	1/1:0,25:25:75.24:928,75,0	1/1:1,15:16:45.14:558,45,0	1/1:2,35:37:96.30:1190,96,0	1/1:0,25:25:75.21:904,75,0	1/1:3,16:19:48.15:595,48,0	1/1:0,25:25:75.23:917,75,0	1/1:0,13:13:36.11:446,36,0	1/1:1,13:14:36.11:445,36,0	1/1:0,15:15:39.12:483,39,0	1/1:0,14:14:39.12:483,39,0	1/1:1,13:14:42.13:519,42,0	1/1:0,14:14:39.12:483,39,0	1/1:1,42:43:99:1562,126,0	1/1:0,23:23:69.22:855,69,0	1/1:0,12:12:36.09:431,36,0	1/1:1,16:17:42.13:520,42,0	1/1:0,42:42:99:1561,126,0	1/1:0,16:16:45.14:558,45,0	1/1:1,12:13:33.10:409,33,0	1/1:2,22:24:66.21:815,66,0	0/0:15,0:15:45.14:0,45,630	1/1:0,22:22:63.20:781,63,0	1/1:0,11:11:30.09:372,30,0	1/1:0,13:13:39.12:483,39,0
chr10	88205964	.	GT	G	1007.18	PASS	AB=0.880;AC=14;AF=0.259;AN=54;BaseQRankSum=3.752;DP=538;FS=14.178;HRun=2;HaplotypeScore=84.6868;InbreedingCoeff=0.6028;MQ=56.59;MQ0=51;MQRankSum=-2.044;QD=8.54;ReadPosRankSum=-2.205;VQSLOD=-0.4457;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:34:81.78:0,82,999	1/1:0,5:2:6.02:69,6,0	0/0:53,0:21:60.06:0,60,705	0/0:67,0:25:57.42:0,57,755	0/0:9,4:13:11.23:0,11,159	0/0:16,0:14:37.85:0,38,461	0/0:16,0:16:27.08:0,27,346	0/0:21,0:20:54.09:0,54,667	0/1:21,2:23:2.71:3,0,321	1/1:3,8:6:18.06:229,18,0	1/1:2,7:9:11.90:144,12,0	0/0:21,0:17:44.36:0,44,576	0/0:5,1:4:8.69:0,9,120	0/0:18,0:16:42.93:0,43,452	0/0:14,1:14:30.07:0,30,369	0/1:14,0:14:10.55:11,0,254	1/1:6,14:13:12.75:309,13,0	0/0:16,1:14:35.28:0,35,420	0/1:5,10:10:14.44:259,0,14	./.	0/0:34,0:31:38.02:0,38,677	0/0:16,0:13:34.92:0,35,435	0/0:4,0:4:8.06:0,8,86	0/0:23,5:27:32.21:0,32,385	0/1:11,0:11:4.15:4,0,303	0/0:16,0:15:38.99:0,39,402	1/1:3,7:6:12.04:149,12,0	0/0:10,0:10:23.52:0,24,269
chr10	88205989	.	G	GT	448.64	PASS	AB=0.930;AC=6;AF=0.115;AN=52;BaseQRankSum=2.478;DP=514;FS=5.079;HRun=1;HaplotypeScore=93.3466;InbreedingCoeff=-0.1656;MQ=39.87;MQ0=67;MQRankSum=-1.810;QD=4.23;ReadPosRankSum=0.708;VQSLOD=0.4581;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:27:35.04:0,35,455	0/0:3,0:1:3.01:0,3,32	0/0:24,0:2:3.01:0,3,38	0/0:45,0:8:20.08:0,20,213	0/0:14,0:14:11.45:0,11,136	0/1:20,0:15:99:106,0,129	0/1:11,9:18:42.08:42,0,135	0/0:25,0:21:54.17:0,54,681	0/0:23,0:23:14.09:0,14,191	0/0:15,0:12:35.70:0,36,414	0/0:11,0:10:5.60:0,6,42	0/1:17,0:14:52.20:169,0,52	0/0:12,0:9:6.02:0,6,77	0/1:13,1:13:61.37:61,0,81	0/0:15,0:13:13.23:0,13,136	0/0:19,0:18:19.53:0,20,209	0/0:17,0:10:11.60:0,12,168	0/1:18,1:15:99:109,0,156	0/0:15,0:13:36.09:0,36,429	./.	0/0:44,0:36:66.16:0,66,788	0/1:14,0:10:82.21:82,0,90	./.	0/0:31,0:29:35.88:0,36,397	0/0:12,0:12:27.09:0,27,341	0/0:16,0:15:38.57:0,39,399	0/0:13,0:7:12.10:0,12,122	0/0:8,0:8:17.89:0,18,205
chr10	88205990	.	TG	T	485.48	PASS	AB=0.798;AC=7;AF=0.135;AN=52;BaseQRankSum=2.447;DP=503;FS=3.770;HRun=1;HaplotypeScore=91.6918;InbreedingCoeff=-0.1803;MQ=39.68;MQ0=65;MQRankSum=-1.904;QD=3.98;ReadPosRankSum=0.353;VQSLOD=0.3825;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:26:38.07:0,38,485	0/0:3,0:1:2.98:0,3,22	0/0:23,0:1:3.01:0,3,38	0/0:42,0:7:20.08:0,20,216	0/0:14,0:14:11.23:0,11,128	0/1:13,7:15:99:132,0,125	0/1:20,0:18:42.08:42,0,133	0/0:23,0:19:57.17:0,57,705	0/0:22,0:22:18.42:0,18,267	0/0:15,0:12:36.11:0,36,449	0/0:11,0:10:5.57:0,6,31	0/1:10,8:14:48.60:156,0,49	0/0:12,0:9:6.96:0,7,77	0/1:6,9:13:82.48:110,0,82	0/0:15,0:13:15.04:0,15,186	0/0:19,0:18:21.06:0,21,261	0/1:16,0:10:4.13:4,0,165	0/1:15,4:15:81.10:81,0,186	0/0:14,0:13:36.11:0,36,483	./.	0/0:44,0:36:66.53:0,67,761	0/1:8,6:10:82.21:82,0,90	./.	0/0:32,0:30:42.09:0,42,481	0/0:12,0:12:27.09:0,27,372	0/0:14,0:13:32.26:0,32,375	0/0:13,0:7:12.09:0,12,110	0/0:7,0:7:15.52:0,16,202
chr10	88206005	.	GTGT	G	852.77	PASS	AB=0.993;AC=18;AF=0.333;AN=54;BaseQRankSum=3.259;DP=433;FS=2.127;HRun=0;HaplotypeScore=102.7017;InbreedingCoeff=0.0425;MQ=46.34;MQ0=41;MQRankSum=-5.368;QD=4.40;ReadPosRankSum=2.645;VQSLOD=1.4732;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:24:37.47:0,37,468	1/1:3,0:2:3.01:43,3,0	0/0:11,0:3:3.01:0,3,40	0/0:8,0:2:5.93:0,6,56	0/0:18,0:18:21.36:0,21,166	0/1:21,0:16:12.29:12,0,65	0/0:19,0:17:31.75:0,32,220	0/0:22,0:18:40.82:0,41,508	0/0:19,0:19:19.47:0,19,175	1/1:14,0:11:25.49:307,25,0	1/1:9,0:7:3.01:42,3,0	0/1:15,0:13:23.02:43,0,23	0/0:16,0:14:8.82:0,9,87	0/1:15,0:15:46.82:47,0,81	0/1:12,0:10:24.89:25,0,61	0/1:16,0:15:21.15:93,0,21	0/1:13,0:9:19.97:72,0,20	0/0:17,0:14:1.76:0,2,98	0/1:13,1:13:17.88:170,0,18	./.	0/0:41,0:33:30.32:0,30,616	0/0:13,0:12:14.10:0,14,105	0/0:11,0:10:12.19:0,12,97	0/1:29,0:27:0.53:1,0,281	0/1:10,0:10:9.74:10,0,372	0/1:14,0:13:55.14:55,0,149	1/1:7,2:6:5.84:92,6,0	0/0:8,0:8:16.51:0,17,256
chr10	88206006	.	TGTTGTGTGTGTGTGTGTGC	T	1610.99	PASS	AB=0.986;AC=19;AF=0.352;AN=54;BaseQRankSum=4.275;DP=436;FS=0.673;HRun=0;HaplotypeScore=175.8775;InbreedingCoeff=0.3775;MQ=46.70;MQ0=41;MQRankSum=-3.889;QD=9.15;ReadPosRankSum=2.372;VQSLOD=2.7434;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:24:37.35:0,37,365	1/1:2,0:2:3.01:30,3,0	0/0:11,0:3:3.01:0,3,60	0/0:8,0:2:5.93:0,6,57	0/0:18,0:18:8.08:0,8,128	1/1:19,2:16:17.96:408,18,0	1/1:20,0:18:17.69:149,18,0	0/0:23,0:19:53.23:0,53,540	0/0:18,0:18:23.37:0,23,943	0/1:14,0:11:35.09:35,0,227	1/1:9,0:7:2.74:12,3,0	0/1:16,0:14:0.22:172,0,0	0/0:16,0:14:5.61:0,6,99	1/1:12,2:15:13.50:609,14,0	0/1:12,0:10:3.01:3,0,447	0/0:16,0:15:11.54:0,12,302	0/1:14,0:10:43.05:43,0,95	0/1:16,2:15:2.63:239,0,3	0/1:13,0:12:39.02:39,0,600	./.	0/0:41,0:33:55.46:0,55,1220	1/1:12,1:12:2.91:36,3,0	0/0:11,0:10:2.36:0,2,6	0/0:29,0:27:14.04:0,14,705	0/0:10,0:10:26.92:0,27,1152	0/0:14,0:13:33.11:0,33,916	0/1:9,0:6:0.39:0,0,125	0/0:9,0:9:26.47:0,26,491
chr10	88206007	.	GT	G	726.31	PASS	AB=0.896;AC=17;AF=0.315;AN=54;BaseQRankSum=3.751;DP=420;FS=3.176;HRun=2;HaplotypeScore=91.0434;InbreedingCoeff=0.1150;MQ=48.75;MQ0=41;MQRankSum=-4.698;QD=4.35;ReadPosRankSum=2.370;VQSLOD=0.9111;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:26:40:0,40,497	1/1:1,1:2:3.01:30,3,0	0/0:11,0:3:3.01:0,3,40	0/0:9,0:3:8.93:0,9,80	0/0:16,2:18:20.88:0,21,164	0/0:18,0:13:10.70:0,11,81	0/0:18,1:17:35.14:0,35,248	0/0:23,0:19:52.13:0,52,611	0/1:18,0:18:3.10:3,0,103	1/1:3,9:9:24.08:303,24,0	1/1:3,6:7:3:28,3,0	0/1:9,1:8:29.45:29,0,49	0/0:16,0:14:8.58:0,9,87	0/0:11,0:11:1.45:0,1,90	0/1:12,0:10:21.98:34,0,22	0/1:13,3:15:11:106,0,11	0/1:5,9:10:19.96:58,0,20	0/0:17,0:14:12.46:0,12,112	0/1:10,3:12:16.20:195,0,16	./.	0/0:41,1:34:35.21:0,35,701	0/0:11,0:10:14.30:0,14,105	0/0:11,0:10:11.85:0,12,97	0/1:28,1:27:3.29:3,0,232	0/1:10,0:10:10.08:10,0,306	0/1:12,1:12:11.59:12,0,169	1/1:7,2:6:5.69:72,6,0	0/0:9,0:9:26.28:0,26,311
chr10	88206008	.	T	TG	780.59	PASS	AB=0.894;AC=17;AF=0.315;AN=54;BaseQRankSum=2.440;DP=412;FS=2.257;HRun=1;HaplotypeScore=92.5037;InbreedingCoeff=0.1372;MQ=50.53;MQ0=39;MQRankSum=-4.427;QD=4.76;ReadPosRankSum=1.370;VQSLOD=0.6329;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:25:39.98:0,40,506	1/1:2,0:2:2.99:23,3,0	0/0:11,0:3:3.01:0,3,40	0/0:10,0:4:8.93:0,9,81	0/0:17,1:18:20.73:0,21,165	0/0:17,0:12:17.46:0,17,109	0/0:21,0:19:41.13:0,41,302	0/0:22,0:18:52.22:0,52,615	0/1:13,5:18:26.22:26,0,95	1/1:10,1:8:24.08:304,24,0	1/1:9,0:7:2.88:15,3,0	0/1:10,0:8:26.60:27,0,60	0/0:16,0:14:8.63:0,9,87	0/0:11,0:11:24.12:0,24,144	0/1:9,2:10:15.61:54,0,16	0/1:14,2:15:11.09:130,0,11	0/1:15,1:12:20.13:44,0,20	0/0:16,0:13:17.79:0,18,130	0/1:6,7:12:13.06:237,0,13	./.	0/0:39,1:33:38.14:0,38,725	0/0:10,0:9:14.24:0,14,106	0/0:11,0:10:11.96:0,12,97	0/1:26,0:26:21.65:22,0,211	0/1:10,0:10:10.12:10,0,297	0/1:13,0:12:0.19:0,0,198	1/1:6,1:4:5.99:48,6,0	0/0:9,0:9:27.03:0,27,324
chr10	88206021	.	TGTGC	T	510.47	PASS	AB=0.996;AC=17;AF=0.304;AN=56;BaseQRankSum=-0.436;DP=432;FS=2.043;HRun=0;HaplotypeScore=111.6590;InbreedingCoeff=-0.0063;MQ=58.06;MQ0=27;MQRankSum=-0.065;QD=2.29;ReadPosRankSum=-2.228;VQSLOD=1.7634;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:29:3.12:0,3,559	1/1:3,0:3:2.37:8,2,0	0/0:13,0:5:6.46:0,6,97	0/1:12,0:6:16.27:16,0,35	0/1:18,0:18:23.39:30,0,23	1/1:8,8:14:7.28:64,7,0	0/1:20,1:20:35.63:75,0,36	0/0:18,0:15:17.40:0,17,525	0/0:18,0:18:18.24:0,18,108	0/0:11,0:8:17.68:0,18,104	0/1:9,0:8:0.73:1,0,20	0/1:10,0:9:0.03:73,0,0	0/0:16,0:15:6.27:0,6,44	1/1:12,1:13:2.36:189,2,0	0/0:11,0:11:8.13:0,8,50	0/0:15,0:14:5.17:0,5,21	0/0:17,0:13:3.65:0,4,33	0/1:16,0:14:7.19:14,0,7	0/0:18,0:17:39.69:0,40,337	0/0:10,0:9:3:0,3,25	0/1:38,0:34:23.12:23,0,771	0/1:14,0:13:4.57:70,0,5	0/0:10,0:10:3:0,3,19	0/1:29,0:29:29.03:29,0,91	0/0:12,0:12:27.09:0,27,659	0/1:11,0:11:7.02:7,0,188	0/0:8,0:6:9.61:0,10,57	0/1:13,0:13:57.42:57,0,287
chr10	88207716	.	TGC	T	14409.46	PASS	AB=0.659;AC=48;AF=0.857;AN=56;BaseQRankSum=2.939;DP=584;FS=6.157;HRun=0;HaplotypeScore=188.3655;InbreedingCoeff=0.6943;MQ=49.22;MQ0=3;MQRankSum=-4.654;QD=29.47;ReadPosRankSum=4.194;VQSLOD=5.6718;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,26:33:60.62:788,61,0	1/1:1,5:6:15.05:241,15,0	0/0:46,0:29:73.90:0,74,1251	0/0:33,0:25:68.83:0,69,1040	1/1:3,13:15:20.88:304,21,0	1/1:6,21:27:60.05:821,60,0	1/1:4,25:29:60.14:886,60,0	1/1:9,21:30:65.97:1094,66,0	1/1:6,17:22:45.08:678,45,0	1/1:2,17:17:31.12:718,31,0	1/1:1,5:6:9.03:123,9,0	1/1:1,14:15:38.94:616,39,0	1/1:6,12:18:41.79:572,42,0	1/1:0,8:8:24.01:331,24,0	1/1:7,23:30:56.96:827,57,0	1/1:4,14:17:45.09:696,45,0	1/1:5,13:18:47.95:656,48,0	0/1:6,5:11:66.01:178,0,66	0/1:7,10:17:10.19:393,0,10	1/1:3,20:23:36.07:582,36,0	1/1:15,40:55:75.16:1199,75,0	1/1:4,7:11:24.07:349,24,0	1/1:2,10:9:18.04:279,18,0	1/1:6,17:22:24.02:368,24,0	0/0:15,0:15:45.15:0,45,890	1/1:3,21:24:72.10:1078,72,0	1/1:0,12:12:27.02:393,27,0	1/1:0,5:5:15.05:241,15,0
chr10	88207738	.	GGTGTGTTCGCGCGT	G	4483.41	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-1.939;DP=523;FS=1.611;HRun=0;HaplotypeScore=280.8366;InbreedingCoeff=-0.3364;MQ=39.45;MQ0=4;MQRankSum=-4.564;QD=10.40;ReadPosRankSum=-0.553;VQSLOD=3.0569;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:25.85:26,0,114	1/1:5,0:5:6.02:117,6,0	0/0:37,0:19:50.70:0,51,1528	0/0:28,0:16:38.50:0,38,1151	1/1:15,0:13:10.42:73,10,0	0/1:24,0:24:99:152,0,295	0/1:36,0:36:99:113,0,320	0/1:33,0:32:99:652,0,180	0/1:18,0:18:99:162,0,102	0/1:19,0:17:99:162,0,370	0/1:5,0:5:13.19:13,0,46	0/1:14,0:14:99:105,0,147	0/1:15,0:15:0.54:332,0,1	0/0:12,0:12:7.81:0,8,275	0/1:29,0:29:99:194,0,133	0/1:16,0:16:99:119,0,127	0/1:13,0:13:99:125,0,428	0/1:10,0:10:35.56:36,0,183	1/1:6,2:8:18.06:542,18,0	1/1:9,8:17:20.24:656,20,0	0/1:46,0:47:60.75:61,0,99	0/1:10,0:10:23.01:23,0,191	0/1:12,0:9:11.37:11,0,15	0/1:19,0:18:5.17:24,0,5	0/0:14,0:14:30.50:0,30,1845	0/1:22,0:22:99:380,0,476	1/1:6,1:8:11.71:275,12,0	0/1:7,0:7:99:131,0,171
chr10	88207744	.	TTCGCGC	T	10143.90	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=8.637;DP=455;FS=5.027;HRun=0;HaplotypeScore=182.3088;InbreedingCoeff=0.8533;MQ=39.61;MQ0=5;MQRankSum=-7.273;QD=26.62;ReadPosRankSum=1.254;VQSLOD=4.4918;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,14:23:14.95:272,15,0	1/1:0,3:4:6.02:117,6,0	0/0:32,0:18:50.70:0,51,1334	0/0:26,0:15:38.50:0,38,990	1/1:1,13:12:13.96:156,14,0	1/1:0,10:19:26.11:398,26,0	1/1:2,15:32:36.59:463,37,0	1/1:0,15:17:51.03:1128,51,0	1/1:2,15:17:33.06:629,33,0	1/1:3,7:14:42.09:828,42,0	1/1:2,0:6:8.54:99,9,0	1/1:2,6:14:17.88:328,18,0	1/1:3,10:13:35.34:677,35,0	1/1:0,4:13:17.64:232,18,0	1/1:3,24:28:51:992,51,0	1/1:2,15:17:30.10:558,30,0	1/1:1,3:12:25.39:266,25,0	1/1:2,1:8:15.04:196,15,0	1/1:2,4:6:18.06:389,18,0	1/1:9,7:16:20.42:274,20,0	1/1:10,12:35:11.89:94,12,0	1/1:1,3:10:17.19:146,17,0	1/1:1,9:8:8.85:137,9,0	1/1:1,12:15:9.13:95,9,0	0/0:14,0:14:39.61:0,40,1298	1/1:2,11:20:60:1226,60,0	1/1:2,2:4:11.71:198,12,0	1/1:0,3:9:14.94:243,15,0
chr10	88207776	.	TGTGG	T	995.27	PASS	AB=0.952;AC=11;AF=0.196;AN=56;BaseQRankSum=5.658;DP=507;FS=4.240;HRun=0;HaplotypeScore=177.9719;InbreedingCoeff=0.4301;MQ=54.62;MQ0=6;MQRankSum=-2.968;QD=6.82;ReadPosRankSum=2.819;VQSLOD=2.5252;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:59.46:0,59,532	0/0:2,0:2:2.97:0,3,20	0/0:26,0:15:42.01:0,42,423	0/0:29,0:21:38.80:0,39,588	0/1:10,1:9:32.56:35,0,33	0/0:16,0:16:30.72:0,31,385	0/0:30,0:28:44.96:0,45,331	0/0:21,0:20:48.15:0,48,601	0/1:17,3:20:9.48:215,0,9	0/0:23,0:21:47.05:0,47,547	0/0:10,0:10:8.98:0,9,114	0/0:16,0:16:26.03:0,26,294	1/1:9,2:11:21.48:215,21,0	0/0:22,0:22:38.90:0,39,328	0/1:40,1:41:28.49:426,0,28	0/1:14,0:14:0.75:107,0,1	0/0:9,0:9:20.70:0,21,250	0/0:11,0:11:26.82:0,27,277	0/0:9,0:9:13.16:0,13,184	0/1:16,0:16:13.28:13,0,135	0/0:44,0:44:26.19:0,26,343	0/0:12,0:11:12.08:0,12,92	1/1:10,0:8:5.70:46,6,0	1/1:23,0:22:12.38:95,12,0	0/0:12,0:12:30.03:0,30,691	0/0:19,0:19:41.38:0,41,499	0/0:12,0:12:17.91:0,18,273	0/0:7,0:7:9.48:0,9,103
chr10	88207778	.	TGG	T	1297.46	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=3.555;DP=499;FS=1.109;HRun=3;HaplotypeScore=158.7918;InbreedingCoeff=0.8850;MQ=57.09;MQ0=6;MQRankSum=-1.591;QD=10.55;ReadPosRankSum=1.048;VQSLOD=0.3278;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:59.10:0,59,455	0/0:2,0:2:2.97:0,3,20	0/0:25,0:15:38.18:0,38,417	0/0:31,0:23:29.84:0,30,560	1/1:7,5:10:9.39:78,9,0	0/0:16,0:16:35.26:0,35,359	0/0:29,0:27:47.10:0,47,343	0/0:22,0:22:44.56:0,45,470	1/1:13,5:18:31.43:243,31,0	0/0:23,0:21:39.40:0,39,398	0/0:11,0:11:8.97:0,9,91	0/0:18,0:18:32.97:0,33,321	1/1:6,4:10:24.02:223,24,0	0/0:24,0:24:45.45:0,45,408	1/1:23,15:38:58.53:591,59,0	1/1:5,8:13:5.63:147,6,0	0/0:9,0:9:16.41:0,16,77	0/0:11,0:11:21.18:0,21,241	0/0:9,0:9:25.21:0,25,188	0/0:16,0:16:21.30:0,21,142	0/0:38,0:38:24.73:0,25,231	0/0:12,0:11:17.61:0,18,130	1/1:4,5:8:5.61:53,6,0	1/1:13,10:22:17.79:147,18,0	0/0:12,0:12:16.54:0,17,445	0/0:18,0:18:34.31:0,34,330	0/0:13,0:13:28.48:0,28,224	0/0:7,0:7:8.37:0,8,60
chr10	88207830	.	CCTAACCTTCTGAGCAT	C	3687.76	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.797;DP=512;FS=5.091;HRun=0;HaplotypeScore=232.4069;InbreedingCoeff=0.9477;MQ=83.11;MQ0=0;MQRankSum=-6.601;QD=85.76;ReadPosRankSum=2.400;VQSLOD=3.0070;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.25:0,72,4724	1/1:0,5:5:15.05:710,15,0	0/0:26,0:26:75.23:0,75,3700	0/0:29,0:29:78.26:0,78,4628	0/0:14,0:14:36.12:0,36,2785	0/0:14,0:14:42.14:0,42,3062	0/0:18,0:18:54.19:0,54,3500	0/0:40,0:40:99:0,117,7502	0/0:21,0:21:63.22:0,63,4478	1/1:4,14:18:39.10:1610,39,0	1/1:4,7:11:21.07:942,21,0	0/0:20,0:20:54.17:0,54,3924	0/0:11,0:11:33.11:0,33,2573	0/0:23,0:23:51.17:0,51,3666	0/0:34,0:34:99:0,102,7299	0/0:22,0:22:66.23:0,66,4933	1/1:4,5:7:9.03:426,9,0	0/0:12,0:12:33.11:0,33,2616	0/0:18,0:18:48.13:0,48,2731	0/0:13,0:13:36.12:0,36,2661	0/0:20,0:20:51.11:0,51,3162	0/0:9,0:9:27.05:0,27,1921	0/0:2,0:2:6.02:0,6,476	0/0:24,0:24:62.59:0,63,4324	0/0:12,0:12:36.12:0,36,2830	0/0:24,0:24:72.25:0,72,5504	0/0:28,0:28:84.29:0,84,6192	0/0:9,0:9:21.07:0,21,1667
chr10	88208755	.	G	GA	1916.95	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=4.902;DP=557;FS=2.544;HRun=9;HaplotypeScore=97.0907;InbreedingCoeff=0.8226;MQ=59.64;MQ0=11;MQRankSum=-7.042;QD=10.04;ReadPosRankSum=-2.560;VQSLOD=2.3228;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,105,933	1/1:1,2:8:11.40:59,11,0	0/1:25,0:7:8.78:9,0,59	0/1:23,0:7:23.25:23,0,40	0/0:32,0:32:41.90:0,42,592	0/0:13,0:13:35.99:0,36,313	0/0:15,0:15:41.96:0,42,356	0/0:21,0:21:56.97:0,57,491	0/0:14,0:14:38.99:0,39,339	1/1:10,3:23:33.57:199,34,0	1/1:8,0:13:17.50:105,17,0	0/0:8,0:8:15.05:0,15,152	0/0:14,0:13:32.98:0,33,286	0/0:11,0:11:26.99:0,27,234	0/0:14,0:14:35.95:0,36,308	0/0:8,0:8:18:0,18,156	1/1:8,0:21:35.34:187,35,0	0/0:26,0:26:39.11:0,39,542	1/1:15,9:20:44.84:461,45,0	1/1:13,19:33:42.95:677,43,0	0/0:13,0:13:29.99:0,30,260	0/0:24,0:24:59.92:0,60,507	0/0:27,0:27:68.95:0,69,591	0/0:26,1:27:38.76:0,39,561	0/0:18,0:18:44.98:0,45,391	0/0:26,0:26:39.53:0,40,498	1/1:6,11:17:36.10:397,36,0	0/0:13,0:13:35.97:0,36,308
chr10	88208784	.	G	GA	1443.26	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-4.158;DP=558;FS=3.468;HRun=9;HaplotypeScore=103.1705;InbreedingCoeff=0.9786;MQ=64.92;MQ0=2;MQRankSum=-0.931;QD=21.87;ReadPosRankSum=-1.544;VQSLOD=3.0997;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,111,962	0/0:9,0:7:21:0,21,182	0/0:20,0:11:17.90:0,18,143	0/0:27,0:9:11.83:0,12,83	0/0:33,0:33:92.97:0,93,807	0/0:11,0:11:29.99:0,30,260	0/0:21,1:23:31.84:0,32,494	0/0:27,0:26:59.44:0,59,517	0/0:11,0:11:32.99:0,33,287	0/0:24,0:24:59.85:0,60,509	0/0:11,0:11:29.70:0,30,248	0/0:8,0:8:17.99:0,18,156	0/0:14,0:14:38.99:0,39,338	0/0:11,0:11:29.99:0,30,260	0/0:15,0:15:41.99:0,42,365	0/0:8,0:8:20.98:0,21,178	0/0:27,0:27:65.92:0,66,571	0/0:24,0:24:59.94:0,60,514	1/1:4,9:13:33.07:355,33,0	1/1:10,25:36:81.04:866,81,0	0/0:12,0:12:29.99:0,30,260	0/0:20,0:20:38.95:0,39,335	0/0:28,0:28:74.87:0,75,641	0/0:26,0:26:74.98:0,75,651	0/0:11,0:11:29.98:0,30,260	0/0:29,0:29:80.97:0,81,701	1/1:3,14:17:33.09:365,33,0	0/0:19,0:19:48.91:0,49,413
chr10	88209441	.	AT	A	5187.57	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.470;DP=574;FS=1.504;HRun=7;HaplotypeScore=79.0540;InbreedingCoeff=0.9945;MQ=87.60;MQ0=0;MQRankSum=-2.847;QD=28.35;ReadPosRankSum=3.112;VQSLOD=5.5008;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:84.19:856,84,0	1/1:0,9:9:27.06:275,27,0	0/0:24,0:24:51.13:0,51,614	0/0:19,0:19:45.14:0,45,549	0/0:23,0:23:63.18:0,63,776	0/0:17,0:17:51.16:0,51,629	0/0:19,0:19:48.15:0,48,602	0/0:26,0:26:75.22:0,75,909	0/0:16,0:16:48.15:0,48,592	1/1:2,23:25:72.14:726,72,0	1/1:1,19:20:57.13:581,57,0	0/0:17,0:18:54:0,54,655	0/0:13,0:13:36.12:0,36,453	0/0:16,0:16:45.13:0,45,553	0/0:16,0:16:36.11:0,36,440	0/0:13,0:13:33.11:0,33,414	1/1:0,19:19:51.12:520,51,0	0/0:27,0:27:75.24:0,75,942	1/1:2,18:20:54.11:546,54,0	1/1:1,32:33:87.19:887,87,0	0/0:26,0:26:63.19:0,63,778	0/0:23,0:23:69.21:0,69,856	0/0:24,0:24:60.06:0,60,730	0/0:26,0:26:78.23:0,78,965	0/0:11,0:11:30.10:0,30,377	0/0:25,1:26:38.60:0,39,788	1/1:2,26:28:78.17:795,78,0	0/0:8,0:8:12.04:0,12,151
chr10	88209490	.	TTG	T	1403.35	PASS	AB=0.899;AC=17;AF=0.315;AN=54;BaseQRankSum=-3.506;DP=623;FS=6.491;HRun=0;HaplotypeScore=135.9271;InbreedingCoeff=0.4713;MQ=67.09;MQ0=9;MQRankSum=4.109;QD=6.35;ReadPosRankSum=1.307;VQSLOD=2.8763;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:5.98:0,6,46	0/1:13,0:13:12.21:12,0,49	./.	0/0:27,0:19:0.47:0,0,1	1/1:25,6:31:11.77:379,12,0	0/0:17,0:17:18.82:0,19,134	0/0:23,0:23:18.45:0,18,187	0/0:33,0:33:20.77:0,21,150	1/1:7,3:16:29.23:244,29,0	0/1:32,0:31:8.11:8,0,147	0/0:22,0:21:8.99:0,9,74	0/0:20,0:19:20.37:0,20,168	1/1:6,5:12:14.87:142,15,0	0/0:16,0:16:20.39:0,20,158	1/1:4,12:16:15.04:165,15,0	1/1:6,6:14:17.88:179,18,0	0/1:21,0:18:12.74:13,0,20	0/0:25,0:25:23.96:0,24,212	0/0:25,0:25:5.87:0,6,95	0/0:25,0:25:3.46:0,3,26	0/0:34,0:37:62.78:0,63,535	0/0:19,0:19:23.95:0,24,207	0/1:14,7:22:27.47:109,0,27	1/1:19,4:26:29.60:283,30,0	0/1:10,2:14:50.24:50,0,190	0/0:29,0:29:17.70:0,18,269	0/0:21,0:20:2.51:0,3,80	0/0:9,0:13:24.01:0,24,248
chr10	88209518	.	G	GTT	1985.18	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=2.414;DP=599;FS=13.071;HRun=1;HaplotypeScore=133.8990;InbreedingCoeff=0.7201;MQ=51.94;MQ0=15;MQRankSum=0.169;QD=10.23;ReadPosRankSum=0.140;VQSLOD=-0.7522;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:30.69:0,31,241	0/0:10,0:10:16.46:0,16,127	0/1:18,0:8:1.91:2,0,138	0/0:43,0:22:49.37:0,49,458	0/0:27,0:27:74:0,74,581	1/1:15,4:19:18.76:349,19,0	1/1:20,3:23:9.61:205,10,0	0/0:22,0:21:25.21:0,25,318	0/0:18,0:18:41.86:0,42,333	0/0:28,0:27:61.13:0,61,567	0/0:20,0:19:15.77:0,16,146	1/1:14,7:20:23.98:473,24,0	0/0:12,0:12:26.70:0,27,204	1/1:16,3:19:8.02:220,8,0	0/0:19,0:18:29.89:0,30,233	0/0:15,0:14:26.80:0,27,213	0/0:23,0:20:16.41:0,16,165	1/1:21,4:24:11.88:497,12,0	0/0:22,0:21:46.30:0,46,346	0/0:21,0:21:35.11:0,35,284	0/1:41,0:40:14.42:14,0,428	1/1:10,6:16:19.78:356,20,0	0/0:23,0:22:38.55:0,39,329	0/0:22,0:21:59.67:0,60,456	0/0:18,0:18:28.06:0,28,418	0/0:23,0:21:21.44:0,21,296	0/0:16,0:15:30.25:0,30,227	0/1:12,0:12:51.95:52,0,156
chr10	88209523	.	TGTGTGTGCGC	T	3770.15	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-4.500;DP=607;FS=28.513;HRun=0;HaplotypeScore=200.7390;InbreedingCoeff=0.7066;MQ=54.05;MQ0=15;MQRankSum=0.539;QD=14.96;ReadPosRankSum=-5.783;VQSLOD=-0.2951;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:27.94:350,28,0	1/1:5,5:10:15.05:352,15,0	0/0:22,0:13:25.78:0,26,365	0/0:41,0:19:44.68:0,45,664	0/0:27,0:27:69.24:0,69,1958	0/0:21,0:21:23.29:0,23,739	0/0:27,0:27:12.87:0,13,540	0/0:22,0:21:0.14:0,0,172	0/0:17,0:17:41.86:0,42,1017	1/1:27,3:30:51.64:1074,52,0	1/1:11,9:19:2.98:22,3,0	0/1:23,0:22:4.86:5,0,516	0/0:13,0:13:25.30:0,25,540	0/0:20,0:20:13.25:0,13,161	0/0:19,0:18:30.10:0,30,791	0/0:15,0:14:32.84:0,33,809	1/1:20,3:20:36.59:722,37,0	0/0:23,0:22:21.61:0,22,774	1/1:24,0:23:40.70:522,41,0	1/1:20,0:20:29.51:350,30,0	0/1:43,0:42:21.39:21,0,1135	0/0:14,0:14:15.85:0,16,470	0/0:21,0:20:36.12:0,36,849	0/0:23,0:22:48.63:0,49,1316	0/0:18,0:18:48.16:0,48,1538	0/1:24,0:22:1.12:1,0,274	1/1:14,1:15:22.83:351,23,0	0/0:11,0:11:2.46:0,2,759
chr10	88209533	.	C	CGT	2164.03	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=4.136;DP=564;FS=13.476;HRun=0;HaplotypeScore=124.8936;InbreedingCoeff=0.5450;MQ=59.97;MQ0=11;MQRankSum=-4.492;QD=8.73;ReadPosRankSum=-0.284;VQSLOD=2.7110;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:2.50:41,3,0	0/0:8,0:8:4.83:0,5,19	0/0:29,0:20:29.08:0,29,544	0/0:43,0:25:69.11:0,69,816	0/0:26,0:26:45.17:0,45,709	1/1:2,20:24:21.07:348,21,0	1/1:5,26:32:20.96:294,21,0	0/0:24,0:23:47.90:0,48,475	0/0:20,0:20:41.69:0,42,467	0/1:18,0:18:26.40:28,0,26	0/0:11,0:10:2.80:0,3,13	1/1:18,5:22:51.13:665,51,0	0/0:13,0:13:26.80:0,27,312	1/1:8,1:19:21.93:270,22,0	0/0:23,0:22:45.02:0,45,516	0/0:16,0:15:36.06:0,36,430	0/0:18,0:18:1.12:0,1,12	1/1:5,15:19:21.07:342,21,0	1/1:16,0:15:2.02:79,2,0	0/1:11,0:11:4.61:43,0,5	0/1:41,0:40:25.83:26,0,641	1/1:4,10:14:15.03:207,15,0	0/0:21,0:21:39.02:0,39,491	0/0:25,0:24:53.93:0,54,609	0/0:19,0:19:48.58:0,49,602	0/1:15,0:15:10.88:11,0,179	0/0:10,0:10:2.26:0,2,12	0/0:10,0:10:7.31:0,7,106
chr10	88210502	.	T	TTC	8040.41	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-11.994;DP=700;FS=0.341;HRun=0;HaplotypeScore=82.9151;InbreedingCoeff=0.9977;MQ=61.14;MQ0=5;MQRankSum=0.673;QD=48.44;ReadPosRankSum=1.106;VQSLOD=5.9821;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,163,2335	1/1:0,7:7:18.06:337,18,0	0/0:28,0:20:56.99:0,57,774	0/0:9,0:7:21.07:0,21,282	0/0:31,0:31:87.24:0,87,1239	0/0:12,0:12:33.11:0,33,486	0/0:25,0:25:66.22:0,66,970	0/0:28,0:28:78.26:0,78,1147	0/0:30,0:29:75.23:0,75,1054	1/1:1,23:24:69.22:1253,69,0	1/1:0,16:17:45.15:839,45,0	0/0:21,0:21:63.21:0,63,920	0/0:28,0:27:81.23:0,81,1138	0/0:18,0:18:48.16:0,48,706	0/0:29,0:28:84.28:0,84,1227	0/0:18,0:18:51.17:0,51,751	1/1:2,40:42:99:2074,111,0	0/0:22,0:21:63.15:0,63,876	1/1:3,20:23:60.21:1124,60,0	1/1:1,28:28:72.25:1348,72,0	0/0:39,0:38:99:0,105,1538	0/0:25,0:25:66.19:0,66,940	0/0:21,0:21:57.12:0,57,779	0/0:28,0:28:69.22:0,69,989	0/0:26,0:26:75.25:0,75,1103	0/0:22,0:22:66.22:0,66,971	1/1:1,20:22:57.20:1067,57,0	0/0:16,0:16:45.15:0,45,663
chr10	88210657	.	CACTT	C	3194.12	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.026;DP=655;FS=2.986;HRun=0;HaplotypeScore=105.3414;InbreedingCoeff=0.9999;MQ=92.02;MQ0=0;MQRankSum=-3.982;QD=43.16;ReadPosRankSum=2.758;VQSLOD=3.7623;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,2755	1/1:1,15:16:42.14:784,42,0	0/0:32,0:32:84.27:0,84,2111	0/0:26,0:26:58.81:0,59,1556	0/0:26,0:26:63.22:0,63,1657	0/0:25,0:25:69.24:0,69,1798	0/0:22,0:22:66.23:0,66,1725	0/0:23,0:23:66.21:0,66,1653	0/0:19,0:19:54.19:0,54,1439	1/1:1,21:22:60.21:1119,60,0	1/1:2,14:17:36.12:671,36,0	0/0:20,0:20:57.20:0,57,1471	0/0:22,0:22:63.13:0,63,1560	0/0:23,0:23:66.23:0,66,1722	0/0:24,0:24:66.20:0,66,1681	0/0:19,0:19:57.17:0,57,1411	1/1:1,18:19:42.14:781,42,0	0/0:17,0:17:51.13:0,51,1276	0/0:26,0:26:72.25:0,72,1853	0/0:24,0:24:60.20:0,60,1550	0/0:23,0:23:69.24:0,69,1823	0/0:29,0:29:84.29:0,84,2158	0/0:19,0:19:39.13:0,39,1009	0/0:26,0:26:75.26:0,75,2001	0/0:23,0:23:63.20:0,63,1591	0/0:29,0:29:81.27:0,81,2106	0/0:33,0:33:99:0,99,2610	0/0:14,0:14:42.14:0,42,1097
chr10	88210893	.	ATT	A	2323.43	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.830;DP=668;FS=0.482;HRun=5;HaplotypeScore=103.2641;InbreedingCoeff=0.9942;MQ=81.87;MQ0=0;MQRankSum=-11.617;QD=32.27;ReadPosRankSum=1.538;VQSLOD=2.9509;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,2273	1/1:1,5:6:15.05:206,15,0	0/0:14,0:14:30.08:0,30,461	0/0:25,0:25:57.57:0,58,895	0/0:33,0:33:96.30:0,96,1698	0/0:17,0:17:48.16:0,48,880	0/0:27,0:27:75.26:0,75,1372	0/0:32,0:32:87.30:0,87,1595	0/0:32,0:32:93.32:0,93,1704	1/1:1,29:30:86.79:1147,87,0	1/1:5,22:27:63.19:842,63,0	0/0:14,0:14:42.14:0,42,770	0/0:21,0:21:60.21:0,60,1097	0/0:15,0:15:42.13:0,42,727	0/0:27,0:27:78.27:0,78,1425	0/0:27,0:27:78.27:0,78,1430	1/1:1,8:9:21.07:287,21,0	0/0:18,0:18:50.91:0,51,934	0/0:13,0:13:36.12:0,36,658	0/0:32,0:32:90.28:0,90,1588	0/0:22,0:23:62.58:0,63,1104	0/0:29,0:29:78.27:0,78,1426	0/0:22,0:22:60.19:0,60,1070	0/0:22,0:22:60.21:0,60,1100	0/0:26,0:26:78.27:0,78,1430	0/0:38,1:39:70.17:0,70,1936	0/0:31,0:31:90.31:0,90,1649	0/0:13,0:13:39.13:0,39,715
chr10	88210900	.	AGGGAGT	A	4345.27	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.925;DP=667;FS=1.609;HRun=0;HaplotypeScore=151.1815;InbreedingCoeff=0.9949;MQ=78.59;MQ0=0;MQRankSum=-12.573;QD=68.97;ReadPosRankSum=1.752;VQSLOD=5.2684;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,4369	1/1:0,5:5:15.05:365,15,0	0/0:15,0:15:45.15:0,45,1540	0/0:18,0:18:51.15:0,51,1583	0/0:31,0:31:93.32:0,93,3334	0/0:18,0:18:54.17:0,54,1861	0/0:27,0:27:81.28:0,81,2787	0/0:30,0:30:90.30:0,90,3119	0/0:31,0:31:93.32:0,93,3368	1/1:2,26:28:81.28:1922,81,0	1/1:0,22:22:63.22:1528,63,0	0/0:15,0:15:45.15:0,45,1615	0/0:22,0:22:63.17:0,63,2217	0/0:15,0:15:45.15:0,45,1648	0/0:29,0:29:87.30:0,87,3179	0/0:26,0:26:78.27:0,78,2858	1/1:0,8:8:24.04:530,24,0	0/0:20,0:20:57.20:0,57,2065	0/0:16,0:16:45.15:0,45,1548	0/0:32,0:32:93.31:0,93,3315	0/0:23,0:23:69.24:0,69,2526	0/0:30,0:30:84.27:0,84,2994	0/0:23,0:23:66.23:0,66,2418	0/0:25,0:25:69.24:0,69,2528	0/0:26,0:26:78.27:0,78,2778	0/0:37,1:38:41.28:0,41,3842	0/0:37,0:37:99:0,111,4065	0/0:13,0:13:39.13:0,39,1401
chr10	88211282	.	C	CT	983.60	PASS	AB=0.838;AC=24;AF=0.429;AN=56;BaseQRankSum=-0.140;DP=474;FS=1.755;HRun=16;HaplotypeScore=69.7126;InbreedingCoeff=-0.0190;MQ=70.29;MQ0=3;MQRankSum=-1.241;QD=3.13;ReadPosRankSum=-1.351;VQSLOD=-0.3610;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:38:44.73:213,45,0	0/1:14,1:17:8.64:9,0,45	0/0:16,0:12:10.28:0,10,49	0/0:13,0:7:2.69:0,3,17	0/0:20,0:22:5.97:0,6,77	0/1:8,11:19:3.19:62,0,3	0/1:4,7:12:5.39:69,0,5	0/1:25,2:28:24.34:24,0,119	0/0:13,0:17:2.76:0,3,61	0/1:14,2:16:21.55:22,0,77	0/1:14,0:18:25.20:25,0,73	0/1:7,5:13:4.90:50,0,5	0/1:13,0:14:4.61:5,0,54	1/1:4,7:13:1.67:94,2,0	0/0:20,0:20:31.63:0,32,180	0/0:11,0:14:24.37:0,24,127	0/0:21,1:22:6.14:0,6,126	1/1:8,4:12:13.74:118,14,0	0/1:14,1:18:51.13:51,0,76	1/1:2,13:15:17.77:123,18,0	0/1:11,0:11:5.53:6,0,63	0/1:4,6:10:4.94:51,0,5	0/1:8,0:10:8.99:9,0,32	0/0:13,1:13:21.95:0,22,119	0/1:8,1:9:10.77:18,0,11	0/0:17,5:21:7.68:0,8,48	1/1:6,11:18:6.93:131,7,0	0/1:13,5:20:71.69:72,0,102
chr10	88211298	.	T	TTC	482.86	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=3.564;DP=450;FS=23.519;HRun=0;HaplotypeScore=67.8752;InbreedingCoeff=0.4852;MQ=63.32;MQ0=4;MQRankSum=1.141;QD=8.62;ReadPosRankSum=-1.925;VQSLOD=1.3645;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:38:47.79:577,48,0	0/0:12,0:13:32.64:0,33,285	0/0:17,0:14:10.48:0,10,172	0/0:12,0:6:11.98:0,12,112	0/0:18,0:19:29.52:0,30,346	0/0:16,0:16:24.17:0,24,193	0/0:12,0:12:2.49:0,2,105	0/0:33,0:32:52.99:0,53,709	0/0:15,0:16:35.33:0,35,324	0/0:15,0:15:17.78:0,18,336	0/0:15,0:15:26.35:0,26,316	0/0:12,0:12:6.41:0,6,127	0/0:15,0:15:31.11:0,31,300	0/0:13,0:13:13.29:0,13,129	0/0:16,0:16:41.79:0,42,436	0/0:15,0:15:35.95:0,36,373	0/0:20,0:21:56.42:0,56,523	0/0:12,0:13:7.30:0,7,181	0/0:22,0:22:27.07:0,27,414	0/0:13,0:13:22.92:0,23,149	0/0:9,0:9:4.87:0,5,223	0/0:11,0:10:19.24:0,19,172	0/0:11,0:12:13.77:0,14,263	0/0:13,0:13:38.97:0,39,390	0/0:6,0:6:14.70:0,15,118	0/0:12,0:11:29.78:0,30,275	0/1:18,0:17:1.54:2,0,161	0/0:21,0:21:36.90:0,37,445
chr10	88211657	.	CA	C	489.13	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.510;DP=596;FS=2.374;HRun=2;HaplotypeScore=78.3369;InbreedingCoeff=0.9895;MQ=68.32;MQ0=0;MQRankSum=1.471;QD=21.27;ReadPosRankSum=1.597;VQSLOD=3.6999;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:45.15:584,45,0	0/0:11,0:11:30.10:0,30,448	0/0:22,0:20:60.19:0,60,874	0/0:7,0:7:18.06:0,18,245	0/0:24,0:24:72.20:0,72,1051	0/0:18,0:18:51.16:0,51,745	0/0:25,0:24:72.20:0,72,1053	0/0:21,0:21:54.18:0,54,806	0/0:23,0:23:69.19:0,69,1008	0/0:30,0:30:90.28:0,90,1311	0/0:31,0:31:90.30:0,90,1347	0/0:20,0:20:48.10:0,48,672	0/0:20,0:20:60.16:0,60,873	0/0:16,0:16:45.04:0,45,601	0/0:25,0:25:72.24:0,72,1061	0/0:10,0:10:24.08:0,24,353	0/0:28,0:28:84.27:0,84,1239	0/0:18,0:18:54.18:0,54,808	0/0:26,0:26:72.24:0,72,1079	0/0:29,0:29:84.27:0,84,1240	0/0:16,0:16:45.02:0,45,599	0/0:27,0:27:66.12:0,66,919	0/0:24,0:24:66.16:0,66,925	0/0:26,0:26:63.11:0,63,943	0/0:15,0:15:45.11:0,45,648	0/0:18,0:18:48.16:0,48,719	0/0:25,0:25:69.19:0,69,993	0/0:18,0:18:51.17:0,51,764
chr10	88211685	.	C	CATCT	829.74	PASS	AB=0.938;AC=17;AF=0.340;AN=50;BaseQRankSum=-1.822;DP=582;FS=8.642;HRun=0;HaplotypeScore=130.3244;InbreedingCoeff=0.6522;MQ=58.33;MQ0=6;MQRankSum=-1.871;QD=4.28;ReadPosRankSum=-0.338;VQSLOD=2.0490;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:8.85:154,9,0	1/1:11,1:12:8.87:156,9,0	./.	./.	0/0:23,0:23:18.04:0,18,232	0/0:18,0:18:11.82:0,12,161	0/0:25,0:24:11.34:0,11,153	./.	0/0:25,1:25:8.92:0,9,87	0/0:32,0:31:30.34:0,30,369	0/0:26,0:26:21.07:0,21,300	1/1:13,9:23:6.02:139,6,0	0/0:23,0:23:12.04:0,12,163	1/1:16,0:16:3:25,3,0	0/0:27,0:27:2.67:0,3,45	0/0:12,0:12:9.12:0,9,39	0/0:26,0:26:36.09:0,36,482	0/1:14,0:15:9.34:9,0,251	1/1:21,2:23:6.02:139,6,0	1/1:32,4:36:8.87:93,9,0	0/0:10,0:10:0:0,0,0	1/1:19,8:29:6.01:140,6,0	0/0:24,0:24:15.03:0,15,180	0/0:26,0:27:21.07:0,21,279	0/0:20,0:20:24.51:0,25,318	0/0:16,0:16:6.64:0,7,38	1/1:17,2:19:5.89:139,6,0	0/0:13,0:14:4.82:0,5,33
chr10	88211737	.	TATC	T	204.81	PASS	AB=0.944;AC=8;AF=0.143;AN=56;BaseQRankSum=5.667;DP=530;FS=0.612;HRun=0;HaplotypeScore=144.4198;InbreedingCoeff=0.2959;MQ=63.81;MQ0=4;MQRankSum=-4.731;QD=2.03;ReadPosRankSum=1.074;VQSLOD=2.5540;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,5:24:99:124,0,102	0/0:10,0:10:12.09:0,12,74	0/0:27,0:17:31.50:0,32,573	0/0:22,0:19:47.71:0,48,625	0/0:16,0:16:34.36:0,34,372	0/0:22,0:22:26.83:0,27,476	0/0:22,0:22:42.38:0,42,691	0/0:11,0:11:0.06:0,0,110	0/1:17,0:17:9.59:10,0,122	0/0:29,0:29:27.54:0,28,697	0/0:21,0:21:39.42:0,39,497	0/0:22,0:22:42.14:0,42,602	0/0:15,0:15:14.08:0,14,228	0/0:18,0:17:30.09:0,30,445	0/0:21,0:21:7.88:0,8,120	1/1:15,1:16:19.40:128,19,0	0/0:33,0:33:37.34:0,37,660	0/0:12,0:12:33.11:0,33,587	0/0:23,0:20:32.80:0,33,289	0/1:27,0:27:22.03:22,0,99	0/0:6,0:6:3.09:0,3,9	0/0:21,0:21:41.17:0,41,567	0/0:19,0:19:10.88:0,11,228	0/0:26,0:26:24.66:0,25,381	0/0:19,0:19:22.95:0,23,397	0/1:9,0:8:29.58:30,0,35	0/0:13,0:13:4.48:0,4,30	1/1:7,0:6:7.51:30,8,0
chr10	88211740	.	C	CT	1052.03	PASS	AB=0.968;AC=20;AF=0.357;AN=56;BaseQRankSum=4.636;DP=521;FS=9.846;HRun=1;HaplotypeScore=125.9864;InbreedingCoeff=0.0485;MQ=65.32;MQ0=3;MQRankSum=-3.708;QD=3.95;ReadPosRankSum=3.499;VQSLOD=-0.1661;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,1:25:11.84:158,12,0	0/1:8,2:10:9.12:30,0,9	0/0:29,0:19:52.33:0,52,640	0/0:24,0:20:48.09:0,48,629	0/0:14,0:14:30.26:0,30,209	0/0:21,0:21:27.08:0,27,378	0/0:23,0:23:45.13:0,45,593	0/1:11,0:11:87.14:110,0,87	0/1:17,1:17:25.73:50,0,26	0/1:30,0:30:99:187,0,306	0/0:21,0:21:10.01:0,10,258	0/0:19,0:19:33.89:0,34,499	0/1:17,0:17:10.83:11,0,103	0/0:13,5:17:30.10:0,30,417	0/0:19,0:19:7.49:0,7,63	1/1:11,3:14:12.01:204,12,0	0/0:33,0:33:25.79:0,26,396	0/0:13,0:13:36.12:0,36,494	0/1:18,0:17:39.72:99,0,40	0/1:19,3:22:22.39:114,0,22	1/1:5,0:5:3.01:22,3,0	0/0:20,0:20:32.96:0,33,462	0/1:19,0:19:14.96:15,0,123	0/1:27,0:27:10.77:11,0,172	0/1:18,1:19:13.80:14,0,201	0/1:9,0:8:46.68:86,0,47	1/1:16,0:16:7.24:33,7,0	0/1:6,0:6:3.15:84,0,3
chr10	88211741	.	A	ATCTG	9532.05	PASS	AB=0.955;AC=40;AF=0.714;AN=56;BaseQRankSum=-4.789;DP=551;FS=3.872;HRun=0;HaplotypeScore=128.2236;InbreedingCoeff=0.7057;MQ=64.35;MQ0=3;MQRankSum=-3.694;QD=23.02;ReadPosRankSum=3.267;VQSLOD=4.3807;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,5:26:39.10:919,39,0	1/1:3,6:10:5.93:149,6,0	0/1:30,0:19:25.89:26,0,664	0/0:24,0:20:41.81:0,42,659	1/1:4,12:18:9.03:225,9,0	0/0:21,0:21:18.06:0,18,305	0/0:22,0:22:36.12:0,36,602	1/1:6,8:14:33.11:803,33,0	1/1:4,15:19:21.07:520,21,0	1/1:7,25:32:84.26:1917,84,0	1/1:5,16:21:15.05:368,15,0	0/0:19,0:19:36.12:0,36,611	1/1:4,14:18:15.05:336,15,0	0/0:18,0:17:30.10:0,30,509	1/1:2,17:20:3.01:75,3,0	1/1:14,1:15:27.08:638,27,0	1/1:8,24:33:12.04:300,12,0	0/0:13,0:13:24.08:0,24,373	1/1:8,12:19:45.15:1077,45,0	1/1:7,14:24:14.92:373,15,0	1/1:1,4:5:5.59:149,6,0	0/0:20,0:20:36.12:0,36,592	1/1:4,15:19:12.51:300,13,0	1/1:4,24:30:18.01:449,18,0	1/1:8,14:23:15.04:337,15,0	0/1:9,1:8:36.04:208,0,36	1/1:6,10:19:2.88:75,3,0	1/1:3,3:6:12.04:289,12,0
chr10	88211875	.	AGTGTGTGT	A	6488.20	PASS	AB=0.785;AC=48;AF=0.857;AN=56;BaseQRankSum=3.173;DP=622;FS=1.058;HRun=0;HaplotypeScore=178.3893;InbreedingCoeff=0.1889;MQ=61.21;MQ0=8;MQRankSum=-1.788;QD=11.61;ReadPosRankSum=3.920;VQSLOD=3.5982;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:36:12.04:204,12,0	1/1:6,0:11:6.02:112,6,0	0/0:27,0:15:8.96:0,9,163	0/0:36,0:16:6.02:0,6,159	1/1:11,0:20:11.58:63,12,0	1/1:6,13:19:33.11:820,33,0	1/1:15,18:33:36.12:912,36,0	1/1:12,0:17:7.64:34,8,0	1/1:12,0:18:19.98:104,20,0	0/1:20,0:36:43.66:551,0,44	1/1:6,1:16:23.07:434,23,0	1/1:13,10:24:17.95:391,18,0	0/1:13,0:22:19.69:20,0,77	1/1:8,12:18:26.68:600,27,0	1/1:15,0:30:20.18:110,20,0	1/1:5,0:12:8.82:104,9,0	1/1:19,0:28:6.02:112,6,0	0/1:19,1:18:67.51:68,0,99	1/1:8,0:21:6.01:112,6,0	1/1:4,0:17:1.29:279,1,0	1/1:17,0:17:6:77,6,0	1/1:8,12:19:9.03:224,9,0	1/1:3,1:17:25.06:192,25,0	0/1:25,1:32:20.78:123,0,21	1/1:5,0:13:18.06:312,18,0	1/1:10,0:17:3.48:57,3,0	1/1:14,0:27:24.08:420,24,0	1/1:4,0:6:3.01:56,3,0
chr10	88212109	.	GGTGT	G	1774.22	PASS	AB=0.769;AC=31;AF=0.596;AN=52;BaseQRankSum=3.452;DP=512;FS=1.583;HRun=0;HaplotypeScore=110.2548;InbreedingCoeff=0.6073;MQ=67.66;MQ0=10;MQRankSum=-4.607;QD=6.20;ReadPosRankSum=0.620;VQSLOD=2.2328;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:29:6.01:56,6,0	0/0:8,0:9:5.73:0,6,34	./.	./.	1/1:20,8:28:12.01:162,12,0	1/1:14,0:13:15.02:139,15,0	1/1:22,0:22:9.01:84,9,0	0/0:26,0:25:7.18:0,7,58	1/1:6,5:11:3.01:47,3,0	0/1:18,4:22:46.80:47,0,83	0/1:6,0:8:4.20:4,0,7	1/1:9,0:9:9.01:84,9,0	1/1:5,5:10:12.02:147,12,0	1/1:13,0:12:15.02:139,15,0	1/1:5,7:12:18.05:261,18,0	1/1:9,3:14:12.03:149,12,0	0/1:16,4:33:81.84:149,0,82	1/1:12,0:12:3:28,3,0	0/0:18,0:16:15.05:0,15,279	0/0:20,0:20:12.01:0,12,154	0/0:34,0:34:21:0,21,310	1/1:12,0:11:12.01:112,12,0	1/1:10,3:13:9.03:126,9,0	1/1:17,4:21:17.99:229,18,0	0/0:11,0:12:8.75:0,9,106	0/0:13,0:18:23.84:0,24,474	0/0:19,0:18:9.03:0,9,138	0/0:3,0:7:9.03:0,9,157
chr10	88212112	.	GTGTGTGTGTGTGTGT	G	2461.88	PASS	AB=0.796;AC=8;AF=0.143;AN=56;BaseQRankSum=8.845;DP=517;FS=4.543;HRun=0;HaplotypeScore=197.1438;InbreedingCoeff=0.1089;MQ=65.52;MQ0=10;MQRankSum=-5.586;QD=23.01;ReadPosRankSum=2.750;VQSLOD=2.2516;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:27:99:170,0,191	0/0:9,0:9:24.06:0,24,861	0/0:31,0:25:47.79:0,48,926	0/0:28,0:15:45.13:0,45,587	0/0:31,0:30:54.18:0,54,1542	0/1:9,5:13:25.76:603,0,26	0/1:18,4:22:99:316,0,112	0/0:25,0:24:72.23:0,72,1585	0/0:9,0:9:15.05:0,15,393	0/0:26,0:26:72.24:0,72,2954	0/0:10,0:10:24.07:0,24,847	0/1:5,3:8:25.60:318,0,26	0/0:11,0:10:22.32:0,22,622	1/1:8,5:12:5.56:571,6,0	0/0:11,0:11:24.08:0,24,1012	0/0:12,0:12:30.10:0,30,741	0/0:35,0:35:84.75:0,85,3338	0/1:8,1:10:94.39:114,0,94	0/0:18,0:16:48.15:0,48,1525	0/0:20,0:20:27.09:0,27,1032	0/0:37,0:37:78.73:0,79,2815	0/1:5,6:11:7.09:504,0,7	0/0:14,0:14:33.11:0,33,1458	0/0:22,0:22:55.07:0,55,1995	0/0:12,0:11:27.09:0,27,1047	0/0:20,0:19:47.31:0,47,2231	0/0:22,0:21:42.61:0,43,1263	0/0:7,0:7:15.05:0,15,707
chr10	88212155	.	T	TGTGG	510.39	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-0.678;DP=481;FS=0.000;HRun=0;HaplotypeScore=118.8621;InbreedingCoeff=0.9124;MQ=80.08;MQ0=8;MQRankSum=-1.628;QD=12.15;ReadPosRankSum=-1.493;VQSLOD=2.4820;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:38.76:0,39,335	0/0:5,0:5:9:0,9,94	0/0:37,0:24:65.03:0,65,646	0/0:40,0:31:83.39:0,83,793	0/0:22,0:22:30.47:0,30,296	0/0:12,0:9:27.03:0,27,302	0/0:20,0:20:51.30:0,51,457	0/0:13,0:13:30.04:0,30,282	0/0:13,0:13:26.98:0,27,242	0/0:21,0:21:46.78:0,47,484	0/0:12,0:12:23.98:0,24,218	0/0:11,0:11:29.92:0,30,285	0/0:11,0:11:23.93:0,24,230	0/0:17,0:17:39.02:0,39,402	0/0:11,0:11:24.05:0,24,311	0/0:12,0:12:33.02:0,33,347	0/0:31,0:31:75.02:0,75,830	0/0:19,0:19:44.42:0,44,347	1/1:14,0:16:38.93:372,39,0	1/1:6,0:11:11.37:137,11,0	0/0:22,0:22:53.91:0,54,549	0/0:15,0:14:23.97:0,24,256	0/0:11,0:11:20.95:0,21,196	0/0:19,0:19:50.88:0,51,493	0/0:8,0:8:12.01:0,12,128	0/0:21,0:20:48.41:0,48,425	1/1:1,12:13:6.70:132,7,0	0/0:8,0:8:16.63:0,17,107
chr10	88212464	.	C	CT	5713.68	PASS	AB=0.706;AC=39;AF=0.696;AN=56;BaseQRankSum=0.933;DP=516;FS=1.364;HRun=10;HaplotypeScore=82.8133;InbreedingCoeff=0.8796;MQ=68.63;MQ0=1;MQRankSum=-2.932;QD=15.57;ReadPosRankSum=-0.715;VQSLOD=5.0367;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:24:52.16:282,52,0	1/1:2,8:10:24.53:257,25,0	0/0:13,0:9:14.95:0,15,120	0/0:16,0:15:13.66:0,14,104	1/1:11,0:21:29.80:154,30,0	0/0:14,1:15:6.96:0,7,261	0/0:20,0:20:59.92:0,60,490	1/1:15,14:30:29.05:444,29,0	1/1:6,0:8:14.62:95,15,0	1/1:7,16:23:51.13:542,51,0	0/1:7,5:12:6.60:142,0,7	0/0:17,0:17:35.89:0,36,292	1/1:14,0:19:26.02:164,26,0	0/0:26,0:26:56.89:0,57,468	1/1:13,0:18:35.43:203,35,0	1/1:8,0:9:6.14:36,6,0	1/1:5,22:27:45.11:480,45,0	0/0:19,0:19:50.93:0,51,419	1/1:4,14:19:20.28:396,20,0	1/1:4,23:27:68.98:683,69,0	1/1:5,18:23:26.44:475,26,0	0/0:22,0:22:47.12:0,47,373	1/1:6,0:16:31.72:157,32,0	1/1:8,0:12:11.49:63,11,0	1/1:5,0:14:25.63:128,26,0	1/1:6,17:23:25.23:457,25,0	1/1:7,16:25:20.10:395,20,0	1/1:0,5:5:15.04:160,15,0
chr10	88212479	.	C	CT	2071.24	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=2.510;DP=481;FS=18.662;HRun=7;HaplotypeScore=76.5510;InbreedingCoeff=0.9504;MQ=56.34;MQ0=2;MQRankSum=-4.987;QD=18.49;ReadPosRankSum=-1.680;VQSLOD=1.9561;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,14:25:43.55:483,44,0	0/0:7,0:7:21.03:0,21,202	0/0:8,1:5:5.63:0,6,30	0/0:8,0:6:8.24:0,8,58	1/1:5,13:17:30.03:332,30,0	0/0:12,0:12:30.05:0,30,290	0/0:21,0:21:48.06:0,48,458	0/0:28,0:27:72.05:0,72,683	1/1:0,9:9:21.06:247,21,0	0/0:26,0:26:72.09:0,72,684	0/0:11,0:11:21.02:0,21,202	0/0:20,0:20:45.04:0,45,429	1/1:7,6:13:18.06:217,18,0	0/0:22,0:22:57.09:0,57,550	1/1:4,10:13:24.06:273,24,0	1/1:1,5:6:12.04:145,12,0	0/0:27,0:27:60.04:0,60,567	0/0:25,0:25:60.09:0,60,578	0/0:22,0:22:38.98:0,39,361	0/0:23,0:23:60.07:0,60,570	0/0:21,0:21:47.86:0,48,462	0/0:18,0:18:33.04:0,33,318	1/1:4,11:15:27.08:326,27,0	1/1:5,7:12:21.06:253,21,0	0/0:11,0:11:24.03:0,24,232	0/0:26,0:26:56.98:0,57,532	0/0:27,0:27:57.07:0,57,548	0/0:5,0:5:9.01:0,9,87
chr10	88212641	.	T	TCCCAAGTTG	48328.07	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-5.401;DP=605;FS=2.431;HRun=0;HaplotypeScore=144.3470;InbreedingCoeff=0.9991;MQ=67.99;MQ0=1;MQRankSum=-17.309;QD=110.59;ReadPosRankSum=0.067;VQSLOD=5.7079;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,17:36:78.27:3337,78,0	1/1:2,6:9:24.01:1166,24,0	0/0:17,0:17:48.11:0,48,1253	0/0:13,0:13:30.10:0,30,828	1/1:8,26:34:84.29:3765,84,0	0/0:25,0:25:75.24:0,75,2301	0/0:32,0:32:93.29:0,93,2788	1/1:22,10:37:99:3975,102,0	1/1:2,8:14:30.10:1410,30,0	1/1:8,18:27:75.24:3245,75,0	1/1:3,10:19:39.13:1650,39,0	0/0:12,0:12:36.12:0,36,1138	1/1:3,6:10:24.08:1187,24,0	0/0:19,0:19:57.20:0,57,1658	1/1:5,10:17:45.15:2074,45,0	1/1:7,9:16:48.16:2134,48,0	1/1:6,13:19:51.18:2512,51,0	0/0:18,0:18:54.19:0,54,1603	1/1:8,11:20:57.20:2488,57,0	1/1:4,16:23:57.20:2769,57,0	1/1:9,7:22:39.13:1520,39,0	0/0:32,0:32:96.28:0,96,2842	1/1:6,10:15:45.15:1893,45,0	1/1:9,12:24:48.16:2248,48,0	1/1:3,11:16:42.14:1911,42,0	1/1:8,18:28:81.28:3704,81,0	1/1:7,16:29:66.23:2965,66,0	1/1:2,14:18:48.16:2376,48,0
chr10	88213091	.	G	GTTGATGTCTGA	88417	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.755;DP=761;FS=3.608;HRun=0;HaplotypeScore=187.1896;InbreedingCoeff=0.9987;MQ=72.22;MQ0=0;MQRankSum=-11.053;QD=124.36;ReadPosRankSum=7.116;VQSLOD=5.0384;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,15:43:78.25:3934,78,0	1/1:2,13:16:45.15:2459,45,0	0/0:23,0:23:63.21:0,63,1889	0/0:27,0:27:68.69:0,69,1898	1/1:6,23:32:81.28:4451,81,0	1/1:5,17:28:60.21:3315,60,0	1/1:14,16:39:81.28:4236,81,0	1/1:19,8:29:81.28:3786,81,0	1/1:5,25:33:78.27:4221,78,0	1/1:6,22:30:90.31:4874,90,0	1/1:8,9:22:45.11:2197,45,0	1/1:13,20:38:93.32:5029,93,0	1/1:4,13:19:51.18:2785,51,0	1/1:4,25:35:84.29:4694,84,0	1/1:9,24:36:87.30:4817,87,0	1/1:4,21:29:75.26:4216,75,0	1/1:12,11:27:54.19:2796,54,0	1/1:5,11:16:45.12:2466,45,0	1/1:12,7:19:57.20:2544,57,0	1/1:5,13:20:51.17:2845,51,0	1/1:9,6:21:24.08:1166,24,0	1/1:6,12:20:54.19:2744,54,0	1/1:7,7:19:33.11:1657,33,0	1/1:6,24:36:51.13:2829,51,0	1/1:7,14:23:57.20:3015,57,0	1/1:15,23:38:99:5486,111,0	1/1:9,15:31:75.15:4143,75,0	1/1:7,5:12:33.11:1711,33,0
chr10	88213970	.	GGCGCAGAGGGGTA	G	1879.23	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.877;DP=366;FS=2.009;HRun=0;HaplotypeScore=142.7412;InbreedingCoeff=0.7473;MQ=77.51;MQ0=1;MQRankSum=-6.557;QD=62.64;ReadPosRankSum=-0.340;VQSLOD=3.6044;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,15:30:57.20:1974,57,0	0/0:3,0:3:6.02:0,6,391	0/0:8,0:8:21.07:0,21,901	0/0:9,0:9:18.06:0,18,624	0/0:9,0:9:27.09:0,27,1730	0/0:18,0:18:45.14:0,45,2396	0/0:25,0:25:69.24:0,69,4224	0/0:16,0:16:36.12:0,36,1875	0/0:25,0:25:54.19:0,54,3241	0/0:17,0:17:45.14:0,45,2287	0/0:7,0:7:21.07:0,21,1083	0/0:12,0:12:36.12:0,36,1966	0/0:13,0:13:39.13:0,39,2362	0/0:12,0:12:30.10:0,30,1562	0/0:10,0:10:30.10:0,30,1880	0/0:12,0:12:36.10:0,36,1807	0/0:31,0:30:87.30:0,87,5365	0/0:15,0:15:39.13:0,39,2387	0/0:10,0:10:30.10:0,30,1630	0/0:9,0:9:27.09:0,27,1502	0/0:19,0:19:54.19:0,54,3123	0/0:6,0:6:15.05:0,15,823	0/0:9,0:9:21.05:0,21,757	0/0:14,0:14:39.13:0,39,2440	0/0:9,0:9:21.07:0,21,1331	0/0:7,0:7:18.06:0,18,1114	0/0:10,0:10:30.10:0,30,1701	0/0:1,0:1:3.01:0,3,196
chr10	88214002	.	CGG	C	1873.49	PASS	AB=0.583;AC=15;AF=0.268;AN=56;BaseQRankSum=-2.907;DP=330;FS=6.468;HRun=11;HaplotypeScore=62.2026;InbreedingCoeff=0.7630;MQ=64.05;MQ0=2;MQRankSum=1.707;QD=16.43;ReadPosRankSum=4.075;VQSLOD=2.0193;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:7.65:34,8,0	0/0:1,0:5:7.98:0,8,41	0/0:4,0:3:5.98:0,6,63	0/0:5,0:3:3.01:0,3,35	1/1:1,14:15:39.06:405,39,0	0/0:13,0:13:33.10:0,33,487	0/0:21,0:25:54.78:0,55,576	0/0:6,0:8:6.44:0,6,49	1/1:2,16:18:42.09:447,42,0	0/0:1,0:6:2.32:0,2,29	0/0:3,0:11:12.82:0,13,44	0/0:15,0:16:34.85:0,35,413	1/1:0,14:14:38.69:414,39,0	0/0:9,0:10:20.55:0,21,254	1/1:1,6:7:18.04:192,18,0	1/1:1,11:13:29.81:299,30,0	0/0:13,0:36:43.77:0,44,181	0/0:16,0:18:35.09:0,35,459	0/0:9,0:9:23.75:0,24,263	0/0:6,0:7:9.01:0,9,116	0/0:10,0:15:7.88:0,8,82	0/0:4,0:4:9.03:0,9,137	0/1:2,5:7:0.94:80,0,1	1/1:3,9:12:18.02:191,18,0	0/0:5,0:10:10.45:0,10,46	0/0:3,0:3:5.98:0,6,66	0/0:5,0:5:12.02:0,12,162	0/0:4,0:4:9:0,9,86
chr10	88214813	.	GGTGTGTGTGTGTGTGTGTGT	G	2938.95	PASS	AB=0.859;AC=10;AF=0.179;AN=56;BaseQRankSum=5.951;DP=553;FS=0.000;HRun=0;HaplotypeScore=251.1543;InbreedingCoeff=0.5637;MQ=61.27;MQ0=12;MQRankSum=-6.000;QD=29.39;ReadPosRankSum=0.378;VQSLOD=2.4214;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:44:24:0,24,729	0/0:4,0:6:3.01:0,3,61	0/0:15,0:12:5.93:0,6,98	0/0:25,0:17:3.01:0,3,88	0/0:22,0:20:30.10:0,30,2157	1/1:12,5:16:3.01:160,3,0	0/1:9,0:9:11.05:35,0,11	0/0:25,0:22:27.08:0,27,746	0/0:18,0:18:30.10:0,30,2057	0/0:17,0:23:42.09:0,42,1167	0/0:8,0:17:9.03:0,9,313	1/1:5,16:22:27.09:1380,27,0	0/0:4,0:8:15.05:0,15,1025	1/1:7,6:13:6.02:263,6,0	0/0:12,0:12:21.07:0,21,1402	0/0:9,0:13:27.09:0,27,1617	0/0:18,0:24:21.07:0,21,624	0/1:14,9:21:14.58:929,0,15	0/0:21,0:21:27.09:0,27,1383	0/0:26,0:27:57.20:0,57,4179	0/0:15,0:15:21.07:0,21,1223	1/1:8,8:16:5.65:319,6,0	0/0:14,0:14:21.07:0,21,1117	0/0:17,0:33:33.11:0,33,1929	0/0:20,0:21:33.11:0,33,1470	0/0:28,0:26:60.21:0,60,3163	0/0:21,0:21:57.67:0,58,3463	0/0:15,0:14:30.08:0,30,1807
chr10	88215979	.	CT	C	1170.93	PASS	AB=0.917;AC=7;AF=0.125;AN=56;BaseQRankSum=1.509;DP=398;FS=2.697;HRun=4;HaplotypeScore=62.0987;InbreedingCoeff=0.8201;MQ=64.78;MQ0=2;MQRankSum=-0.984;QD=16.26;ReadPosRankSum=-3.361;VQSLOD=2.5310;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:30,3:32:13.22:13,0,867	0/0:8,0:8:21.07:0,21,294	0/0:13,0:8:24.06:0,24,303	0/0:11,0:8:18.06:0,18,250	0/0:19,0:19:44.94:0,45,599	0/0:6,0:6:18.06:0,18,251	0/0:12,0:12:32.08:0,32,414	0/0:25,1:26:24.72:0,25,828	0/0:17,0:17:47.84:0,48,597	0/0:14,0:14:39.13:0,39,531	0/0:15,0:15:27.86:0,28,380	0/0:8,0:8:24.02:0,24,298	0/0:14,0:14:32.74:0,33,481	0/0:8,0:8:15.05:0,15,209	0/0:16,0:15:45.15:0,45,626	0/0:11,0:11:27.09:0,27,375	0/0:16,0:15:18.61:0,19,267	0/0:14,0:14:29.27:0,29,446	1/1:0,13:13:36.10:421,36,0	1/1:0,15:14:42.11:489,42,0	0/0:13,0:13:30.09:0,30,398	0/0:5,0:5:12.04:0,12,167	0/0:18,0:18:45.11:0,45,626	0/0:15,0:14:33.11:0,33,460	0/0:12,0:12:27.08:0,27,362	0/0:22,0:22:53.54:0,54,711	1/1:0,11:11:33.10:396,33,0	0/0:13,0:13:38.49:0,38,496
chr10	88216008	.	T	TGGTTC	1396.97	PASS	AB=0.877;AC=5;AF=0.096;AN=52;BaseQRankSum=2.530;DP=462;FS=1.907;HRun=0;HaplotypeScore=120.8547;InbreedingCoeff=-0.1015;MQ=39.89;MQ0=15;MQRankSum=-5.104;QD=11.18;ReadPosRankSum=3.461;VQSLOD=2.9431;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:38:99:303,0,561	0/0:11,0:11:30.09:0,30,430	./.	./.	0/0:25,0:25:58.52:0,59,929	0/0:9,0:9:27.09:0,27,505	0/0:14,0:13:33.07:0,33,527	0/1:21,1:20:99:226,0,141	0/0:18,0:18:51.17:0,51,996	0/0:20,0:20:57.11:0,57,961	0/0:23,0:23:53.39:0,53,775	0/0:16,0:15:44.10:0,44,666	0/0:11,0:11:30.10:0,30,547	0/0:14,0:14:33.08:0,33,535	0/0:14,0:13:39.12:0,39,706	0/0:14,0:14:27.09:0,27,559	0/0:16,0:14:27.55:0,28,356	0/0:14,0:14:36.12:0,36,719	0/0:16,0:13:37.31:0,37,534	0/0:18,0:16:45.13:0,45,794	0/1:3,3:8:18.91:66,0,19	0/0:10,0:10:26.84:0,27,465	0/0:22,0:22:55.32:0,55,881	0/0:17,0:15:23.82:0,24,361	0/0:12,0:12:33.11:0,33,538	0/1:31,0:32:99:419,0,378	0/0:17,0:15:44.80:0,45,781	0/1:19,2:22:99:500,0,304
chr10	88216011	.	T	TGG	193.50	PASS	AB=0.967;AC=6;AF=0.111;AN=54;BaseQRankSum=5.268;DP=452;FS=3.843;HRun=0;HaplotypeScore=87.2819;InbreedingCoeff=0.2926;MQ=41.00;MQ0=15;MQRankSum=-4.831;QD=2.13;ReadPosRankSum=4.688;VQSLOD=0.9673;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:38:37.51:0,38,502	0/0:9,0:9:24.04:0,24,279	./.	0/1:7,0:2:0:0,0,0	0/0:23,0:23:52.40:0,52,659	0/0:7,0:7:21.05:0,21,264	0/0:14,0:13:33.07:0,33,388	0/1:20,1:18:32.84:33,0,173	0/0:18,0:18:51.16:0,51,675	0/0:19,0:19:54.15:0,54,684	0/0:23,0:23:54.08:0,54,628	0/0:14,0:13:39.07:0,39,460	0/0:12,0:12:32.92:0,33,393	0/0:14,0:14:36.10:0,36,455	0/0:13,0:12:36.11:0,36,473	0/0:14,0:14:27.09:0,27,368	0/0:17,0:15:26.28:0,26,259	0/0:14,0:14:39.13:0,39,530	0/0:15,0:12:36.03:0,36,419	0/0:18,0:16:45.13:0,45,586	1/1:6,2:8:4.34:18,4,0	0/0:10,0:10:27.08:0,27,345	0/0:22,0:22:55.70:0,56,672	0/0:16,0:14:20.72:0,21,247	0/0:12,0:12:33.07:0,33,386	0/1:28,1:31:99:218,0,297	0/0:16,0:14:42.14:0,42,562	0/1:24,0:24:35.58:36,0,271
chr10	88216391	.	TTCTCTCTCTCTCTC	T	2728.03	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.326;DP=607;FS=5.728;HRun=0;HaplotypeScore=204.3610;InbreedingCoeff=0.8673;MQ=61.98;MQ0=14;MQRankSum=-7.283;QD=25.74;ReadPosRankSum=1.907;VQSLOD=2.5270;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:29:15.05:0,15,372	0/0:4,0:4:12.04:0,12,476	0/0:28,0:15:6.02:0,6,127	0/0:63,0:24:7.27:0,7,212	0/0:15,0:23:24.08:0,24,1338	1/1:13,7:20:6.02:237,6,0	1/1:8,8:16:12.04:432,12,0	0/0:30,0:30:22.84:0,23,672	0/0:15,0:17:21.07:0,21,900	0/0:16,0:17:36.08:0,36,1331	0/0:23,0:24:24.08:0,24,955	1/1:9,13:22:9.03:348,9,0	0/0:10,0:13:22.32:0,22,976	1/1:9,12:21:21.07:817,21,0	0/0:10,0:13:18.53:0,19,955	0/0:12,0:12:18.06:0,18,778	0/0:22,0:23:46.97:0,47,2653	1/1:4,7:11:6.02:237,6,0	0/0:15,0:15:20.28:0,20,773	0/0:19,0:18:27.09:0,27,948	0/0:20,0:23:18.05:0,18,538	1/1:6,10:16:21.07:829,21,0	0/0:16,0:20:15.05:0,15,747	0/0:23,0:39:54.19:0,54,2742	0/0:3,0:6:9.03:0,9,352	0/0:27,0:30:63.21:0,63,2809	0/0:18,0:24:39.24:0,39,1674	0/0:19,0:21:29.11:0,29,1050
chr10	88216618	.	TCA	T	897.50	PASS	AB=0.971;AC=5;AF=0.089;AN=56;BaseQRankSum=4.960;DP=858;FS=0.568;HRun=0;HaplotypeScore=133.0004;InbreedingCoeff=0.4298;MQ=61.18;MQ0=1;MQRankSum=-0.359;QD=6.75;ReadPosRankSum=-1.407;VQSLOD=3.0818;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:50,2:53:16.54:243,0,17	0/0:11,0:11:24.06:0,24,370	0/0:49,0:30:19.32:0,19,565	0/0:52,0:34:55.81:0,56,876	0/0:44,0:44:99:0,120,1964	0/0:27,0:27:75.24:0,75,1200	0/0:28,0:28:72.18:0,72,1062	0/0:32,0:31:62.42:0,62,843	0/0:26,0:26:64.08:0,64,1010	0/0:42,0:41:99:0,101,1553	0/0:25,0:25:65.89:0,66,1045	0/0:33,0:33:87.28:0,87,1385	0/0:29,0:29:84.29:0,84,1370	0/0:25,0:25:54.17:0,54,872	0/0:36,0:36:96:0,96,1546	0/0:27,0:28:62.99:0,63,1087	0/0:27,0:26:69.21:0,69,1103	0/0:32,1:33:38.37:0,38,1141	1/1:24,2:26:52.23:463,52,0	0/1:29,1:30:3.87:233,0,4	0/0:30,0:29:38.31:0,38,486	0/0:33,0:33:84.25:0,84,1324	0/0:24,0:24:69.23:0,69,1098	0/0:45,0:45:99:0,123,1876	0/0:17,0:17:45.15:0,45,745	0/0:26,0:25:66.09:0,66,965	0/1:24,0:24:13.09:81,0,13	0/0:3,0:3:5.67:0,6,29
chr10	88216633	.	T	TATACACACAC	2090.57	PASS	AB=0.812;AC=6;AF=0.107;AN=56;BaseQRankSum=0.789;DP=880;FS=8.755;HRun=0;HaplotypeScore=270.3757;InbreedingCoeff=0.1357;MQ=59.47;MQ0=4;MQRankSum=-4.068;QD=14.22;ReadPosRankSum=-5.763;VQSLOD=0.4118;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:52.87:0,53,2435	0/0:8,0:8:22.87:0,23,637	0/0:45,0:25:30.81:0,31,999	0/0:45,0:33:41:0,41,1401	0/0:44,0:44:99:0,132,3475	0/0:28,0:28:81.18:0,81,2137	0/0:28,0:28:72.28:0,72,1642	0/1:40,0:39:99:822,0,150	0/0:22,0:22:60.16:0,60,1685	0/0:36,0:36:99:0,105,2573	0/0:22,0:24:69.22:0,69,2071	0/0:32,0:32:92.76:0,93,2690	0/0:35,0:35:99:0,99,2775	0/0:22,0:22:60.15:0,60,1670	0/0:36,0:36:99:0,102,2857	0/0:31,0:31:93.20:0,93,2152	0/0:29,0:28:80.53:0,81,2049	0/0:33,0:33:64.24:0,64,2154	0/1:28,0:27:22.87:23,0,859	0/0:29,0:29:52.92:0,53,1393	0/1:19,1:44:94.32:94,0,178	0/0:33,0:33:90.07:0,90,2246	0/0:24,0:24:69.09:0,69,1672	0/0:46,0:48:99:0,135,3436	0/0:17,0:17:51.16:0,51,1540	0/1:10,0:27:99:1141,0,146	0/0:24,0:24:5.53:0,6,1263	1/1:3,0:7:3.01:130,3,0
chr10	88216781	.	G	GTTA	5467.07	PASS	AB=0.943;AC=11;AF=0.196;AN=56;BaseQRankSum=-11.397;DP=683;FS=1.380;HRun=0;HaplotypeScore=97.3709;InbreedingCoeff=0.8859;MQ=77.05;MQ0=0;MQRankSum=-1.113;QD=39.33;ReadPosRankSum=1.960;VQSLOD=6.1067;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.26:0,75,1224	1/1:0,11:11:27.02:554,27,0	0/0:22,0:22:51.03:0,51,727	0/0:9,0:9:24.08:0,24,369	0/0:20,0:20:57.19:0,57,930	0/0:30,0:30:84.29:0,84,1372	0/0:22,0:22:66.23:0,66,1078	0/0:35,0:35:99:0,99,1544	0/0:34,0:34:99:0,99,1592	1/1:4,28:32:84.27:1809,84,0	1/1:5,26:31:81.06:1657,81,0	0/0:25,0:25:72.25:0,72,1176	0/0:26,0:26:75.22:0,75,1193	0/0:23,0:23:60.19:0,60,954	0/0:30,0:30:87.30:0,87,1418	0/0:33,0:33:96.28:0,96,1492	1/1:4,10:15:30.10:670,30,0	0/0:13,0:13:30.06:0,30,457	0/0:26,0:26:69.23:0,69,1084	0/0:31,0:31:93.30:0,93,1493	0/0:21,0:21:57.19:0,57,926	0/0:29,0:29:81.28:0,81,1322	0/0:26,0:26:66.23:0,66,1078	0/0:17,0:17:48.16:0,48,784	1/1:1,15:17:33.11:735,33,0	0/1:31,2:33:43.58:44,0,1259	0/0:27,0:27:81.28:0,81,1319	0/0:19,0:19:57.19:0,57,931
chr10	88216916	.	AG	A	1216.65	PASS	AB=0.966;AC=7;AF=0.125;AN=56;BaseQRankSum=12.819;DP=586;FS=10.323;HRun=4;HaplotypeScore=81.6554;InbreedingCoeff=0.7354;MQ=75.03;MQ0=0;MQRankSum=-5.587;QD=13.37;ReadPosRankSum=0.398;VQSLOD=1.6441;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:34:96.29:1152,96,0	0/0:14,0:14:42.14:0,42,587	0/0:12,0:12:30.08:0,30,389	0/0:14,0:13:29.83:0,30,416	0/0:36,0:36:99:0,102,1411	0/0:34,0:34:99:0,102,1410	0/0:18,0:18:54.18:0,54,755	1/1:26,0:26:35.52:112,36,0	0/0:21,0:21:63.21:0,63,882	0/0:34,0:34:93.30:0,93,1287	0/0:19,0:19:54.18:0,54,756	0/0:11,0:11:33.11:0,33,462	0/0:14,0:14:39.12:0,39,528	0/0:22,0:22:66.20:0,66,894	0/0:17,0:17:51.17:0,51,714	0/0:16,0:16:45.15:0,45,630	0/0:14,0:14:42.14:0,42,588	0/0:12,0:11:27.09:0,27,378	0/0:29,0:29:81.26:0,81,1111	0/0:26,0:25:72.23:0,72,990	0/0:4,0:4:2.23:0,2,22	0/0:24,0:24:66.22:0,66,921	0/0:27,0:27:75.24:0,75,1032	0/0:13,0:13:39.13:0,39,544	0/0:35,0:35:99:0,105,1470	0/1:27,0:28:76.99:77,0,77	0/0:29,0:29:87.28:0,87,1191	1/1:3,0:3:4.44:14,4,0
chr10	88216918	.	GGGCAGTGATTTT	G	4702.96	PASS	AB=0.596;AC=7;AF=0.125;AN=56;BaseQRankSum=9.641;DP=579;FS=1.218;HRun=0;HaplotypeScore=204.2737;InbreedingCoeff=0.7874;MQ=75.93;MQ0=0;MQRankSum=-8.983;QD=79.71;ReadPosRankSum=-0.336;VQSLOD=4.7565;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:96.33:0,96,4170	0/0:15,0:15:45.15:0,45,2564	0/0:13,0:13:36.12:0,36,2126	0/0:14,0:13:30.71:0,31,1762	0/0:36,0:36:99:0,105,6175	0/0:34,0:34:99:0,102,5692	0/0:18,0:18:54.19:0,54,3066	1/1:7,17:24:51.16:1878,51,0	0/0:21,0:21:63.22:0,63,3879	0/0:32,0:32:93.32:0,93,5826	0/0:18,0:18:54.19:0,54,3293	0/0:11,0:11:33.11:0,33,2067	0/0:14,0:14:39.12:0,39,2140	0/0:22,0:22:66.22:0,66,3715	0/0:18,0:18:54.19:0,54,3358	0/0:15,0:15:45.15:0,45,2600	0/0:14,0:14:42.14:0,42,2628	0/0:13,0:12:36.12:0,36,2025	0/0:27,0:27:81.28:0,81,4315	0/0:25,0:24:75.26:0,75,4328	1/1:0,4:4:12.04:402,12,0	0/0:23,0:23:66.22:0,66,3218	0/0:25,0:25:75.24:0,75,4280	0/0:13,0:13:39.13:0,39,2386	0/0:35,0:35:99:0,105,6025	0/1:9,19:28:99:2192,0,356	0/0:30,0:30:90.30:0,90,5221	1/1:0,3:3:6.02:232,6,0
chr10	88217406	.	TCTG	T	2083.92	PASS	AB=0.974;AC=13;AF=0.232;AN=56;BaseQRankSum=8.421;DP=562;FS=15.782;HRun=0;HaplotypeScore=87.4767;InbreedingCoeff=0.5775;MQ=75.25;MQ0=1;MQRankSum=-1.161;QD=13.11;ReadPosRankSum=-3.416;VQSLOD=1.4442;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,19:37:45.11:608,45,0	0/1:11,1:12:11.86:12,0,504	0/0:25,0:24:27.09:0,27,447	0/0:18,0:18:5.14:0,5,218	0/0:14,0:14:12.03:0,12,197	0/1:14,0:14:17.89:18,0,396	0/0:39,1:40:48.32:0,48,1694	1/1:8,8:16:24.06:301,24,0	0/0:15,0:15:33.11:0,33,660	0/0:18,0:18:23.82:0,24,395	0/0:9,0:9:9.03:0,9,179	0/0:16,1:18:0.16:0,0,717	0/0:15,0:15:30.10:0,30,592	0/0:23,1:24:15.22:0,15,1031	0/0:17,0:17:36.12:0,36,698	0/0:17,0:17:30.10:0,30,600	0/0:37,2:39:6.34:0,6,1580	0/0:32,1:33:10.05:0,10,1017	0/1:18,0:18:19.16:19,0,302	0/0:8,0:8:9.03:0,9,155	1/1:15,20:35:48.12:650,48,0	0/0:16,0:16:21.07:0,21,420	0/0:12,0:12:12.04:0,12,239	0/0:26,0:26:62.91:0,63,1219	0/0:14,0:15:6.09:0,6,437	1/1:9,10:19:33.10:447,33,0	0/0:24,0:24:60.21:0,60,1199	1/1:3,4:7:15.05:208,15,0
chr10	88217477	.	CTTTTT	C	1528.71	PASS	AB=0.681;AC=8;AF=0.143;AN=56;BaseQRankSum=0.665;DP=558;FS=0.000;HRun=17;HaplotypeScore=126.4284;InbreedingCoeff=0.6811;MQ=66.83;MQ0=3;MQRankSum=-2.992;QD=14.15;ReadPosRankSum=0.076;VQSLOD=0.0726;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:30:5.80:314,6,0	0/0:14,0:14:20.94:0,21,228	0/0:27,0:13:21.87:0,22,230	0/0:18,0:12:9.70:0,10,191	0/0:21,0:20:52.36:0,52,924	0/0:20,0:20:39.10:0,39,779	0/0:23,0:23:54.05:0,54,747	1/1:10,20:32:41.21:716,41,0	0/0:16,0:16:42.14:0,42,921	0/0:27,0:27:60.47:0,60,704	0/0:14,0:14:35.86:0,36,374	0/0:16,0:16:45.05:0,45,730	0/0:12,0:12:33.06:0,33,660	0/0:14,0:13:24.08:0,24,397	0/0:13,0:13:33.09:0,33,645	0/0:14,0:14:36.11:0,36,704	0/0:37,0:37:53:0,53,558	0/0:34,0:34:68.20:0,68,1068	0/0:17,0:17:41.99:0,42,552	0/0:14,0:14:39.02:0,39,648	0/1:11,5:16:7.82:96,0,8	0/0:9,0:9:21.02:0,21,293	0/0:16,0:16:45.06:0,45,905	0/0:32,0:33:92.64:0,93,1693	0/0:25,0:25:51.07:0,51,662	0/1:6,11:18:15.57:385,0,16	0/0:16,0:16:30.05:0,30,440	1/1:7,2:10:14.62:162,15,0
chr10	88217490	.	TTTTTC	T	1938.36	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=3.392;DP=586;FS=42.452;HRun=0;HaplotypeScore=127.3832;InbreedingCoeff=-0.2320;MQ=61.62;MQ0=4;MQRankSum=-1.421;QD=6.19;ReadPosRankSum=3.001;VQSLOD=0.8479;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,14:26:67.39:865,67,0	0/0:11,0:11:8.91:0,9,78	0/0:29,0:7:20.90:0,21,240	0/0:13,0:6:8.84:0,9,157	0/1:28,0:27:53.48:53,0,550	0/0:21,0:21:35.20:0,35,555	0/1:24,0:24:12.71:13,0,299	0/1:30,0:30:99:296,0,133	0/0:14,0:14:39.92:0,40,643	0/1:31,0:31:99:177,0,225	0/1:19,0:19:86.04:86,0,100	0/0:17,0:17:18.95:0,19,461	0/0:10,0:10:27.96:0,28,454	0/0:17,0:16:23.79:0,24,229	0/1:15,0:15:36.49:36,0,366	0/1:20,0:20:99:100,0,385	0/0:37,0:36:16.39:0,16,177	0/0:31,0:31:41.09:0,41,596	0/1:18,0:18:43.33:43,0,229	0/1:20,0:20:83.69:84,0,362	0/1:12,0:12:27.50:27,0,124	0/0:10,0:10:7.94:0,8,180	0/1:21,0:21:34.86:35,0,597	0/0:36,0:36:38.98:0,39,955	0/0:27,0:27:34.76:0,35,358	0/1:20,0:20:99:141,0,171	0/1:19,0:19:99:105,0,202	0/1:9,0:9:11.73:41,0,12
chr10	88217492	.	TTTC	T	4192.90	PASS	AB=0.971;AC=29;AF=0.518;AN=56;BaseQRankSum=-1.138;DP=569;FS=81.690;HRun=0;HaplotypeScore=99.7637;InbreedingCoeff=0.1348;MQ=63.98;MQ0=4;MQRankSum=2.100;QD=9.75;ReadPosRankSum=3.362;VQSLOD=-0.3976;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:29:77.11:532,77,0	1/1:2,8:10:14.44:129,14,0	0/0:29,0:8:23.60:0,24,179	0/0:12,0:7:11.78:0,12,131	0/1:27,1:27:99:157,0,146	0/1:19,1:20:36.68:37,0,175	1/1:19,4:23:20.04:322,20,0	0/0:32,0:32:2.62:0,3,341	0/0:14,0:14:6.75:0,7,258	1/1:3,25:28:67.56:640,68,0	1/1:2,16:18:48.38:336,48,0	0/1:15,0:15:52.60:53,0,79	0/0:10,0:10:14.37:0,14,183	0/1:18,0:17:6.20:32,0,6	0/1:15,1:16:93.89:151,0,94	0/1:21,0:21:89.12:161,0,89	1/1:3,29:32:28.93:388,29,0	0/1:26,1:27:61.43:121,0,61	1/1:20,0:20:0.47:244,0,0	0/1:18,2:20:43.24:223,0,43	0/0:14,0:14:30.38:0,30,240	0/1:9,0:9:18.35:22,0,18	0/1:20,0:20:79.82:80,0,260	0/1:33,2:35:99:133,0,231	1/1:4,18:22:11.89:201,12,0	0/0:19,0:19:32.94:0,33,278	1/1:17,1:18:10.72:231,11,0	0/0:9,0:9:17.84:0,18,123
chr10	88217493	.	TTC	T	5765.72	PASS	AB=0.913;AC=36;AF=0.643;AN=56;BaseQRankSum=-1.089;DP=543;FS=83.919;HRun=0;HaplotypeScore=82.4027;InbreedingCoeff=0.3764;MQ=64.51;MQ0=3;MQRankSum=1.546;QD=13.35;ReadPosRankSum=4.826;VQSLOD=1.4818;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:29:75.93:527,76,0	1/1:8,1:9:14.84:118,15,0	0/0:28,0:8:21.43:0,21,145	0/0:10,0:6:8.69:0,9,79	0/1:26,1:26:10.78:245,0,11	0/1:6,11:17:71.13:71,0,78	1/1:17,6:23:61.82:532,62,0	0/0:31,0:31:41.39:0,41,410	0/1:13,1:14:47.63:48,0,104	1/1:26,1:27:65.37:507,65,0	1/1:16,1:17:46.36:324,46,0	1/1:11,2:13:20.17:151,20,0	0/1:8,1:9:52.59:53,0,65	1/1:2,13:14:15.04:173,15,0	0/1:17,0:17:3.26:202,0,3	0/1:20,1:21:4.19:321,0,4	1/1:29,2:30:29.64:253,30,0	1/1:6,17:23:4.87:361,5,0	1/1:13,6:19:46.71:465,47,0	1/1:19,2:21:38.87:324,39,0	0/0:14,0:14:34.10:0,34,244	1/1:1,7:8:6.97:83,7,0	0/1:20,0:20:99:142,0,100	0/1:33,2:35:47.01:387,0,47	1/1:19,0:19:17.34:126,17,0	0/0:19,0:19:47.48:0,47,323	1/1:15,2:17:43.44:352,43,0	0/0:9,0:9:22:0,22,123
chr10	88217494	.	TC	T	6278.42	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-4.624;DP=538;FS=31.819;HRun=3;HaplotypeScore=74.3458;InbreedingCoeff=0.9330;MQ=64.68;MQ0=3;MQRankSum=2.614;QD=14.77;ReadPosRankSum=0.924;VQSLOD=2.8366;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:29:77.06:537,77,0	1/1:9,0:9:14.72:90,15,0	0/0:28,0:8:13.80:0,14,106	0/0:9,0:6:8.44:0,8,69	1/1:23,2:24:48.73:430,49,0	1/1:17,0:17:8.84:56,9,0	1/1:21,1:22:59.07:432,59,0	0/0:32,0:32:63.12:0,63,459	1/1:12,1:13:18.81:161,19,0	1/1:27,0:27:61.08:436,61,0	1/1:17,0:17:46.78:278,47,0	1/1:9,2:12:17.77:133,18,0	1/1:9,0:9:9:82,9,0	1/1:13,1:14:14.78:96,15,0	1/1:15,4:19:43.45:376,43,0	1/1:17,4:21:53.90:485,54,0	1/1:31,0:30:29.52:185,30,0	1/1:21,2:23:35.34:224,35,0	1/1:17,1:18:53.24:401,53,0	1/1:18,0:18:40.67:322,41,0	0/0:14,0:14:35.38:0,35,254	1/1:7,0:7:8.82:54,9,0	1/1:15,4:19:34.74:272,35,0	1/1:21,14:35:78.27:745,78,0	1/1:19,0:19:14.59:87,15,0	0/0:21,0:21:58.26:0,58,404	1/1:18,1:19:48.62:396,49,0	0/0:9,0:9:23.18:0,23,142
chr10	88217772	.	G	GT	5992.42	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-13.609;DP=637;FS=7.435;HRun=3;HaplotypeScore=62.7899;InbreedingCoeff=0.9998;MQ=94.26;MQ0=0;MQRankSum=-3.252;QD=35.46;ReadPosRankSum=5.485;VQSLOD=5.0592;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.19:0,75,865	0/0:11,0:11:33.09:0,33,383	0/0:40,0:40:99:0,109,1260	0/0:24,0:24:53.34:0,53,630	1/1:1,26:27:78.15:1044,78,0	0/0:22,0:22:57.13:0,57,647	0/0:14,0:14:39.05:0,39,418	0/0:30,0:30:84.22:0,84,961	1/1:1,27:28:72.24:1006,72,0	0/0:34,0:34:90.24:0,90,1034	0/0:12,0:12:36.08:0,36,407	0/0:19,0:19:54.14:0,54,627	1/1:2,19:22:54.18:751,54,0	0/0:16,0:16:45.12:0,45,528	1/1:0,21:21:60.20:840,60,0	1/1:2,19:21:48.16:672,48,0	0/0:23,0:23:63.15:0,63,730	0/0:16,0:16:30.09:0,30,360	0/0:17,0:17:48.11:0,48,530	0/0:22,0:22:63.17:0,63,736	0/0:26,0:26:75.21:0,75,886	0/0:27,0:27:78.17:0,78,898	1/1:0,21:21:54.18:755,54,0	1/1:1,28:29:66.22:924,66,0	0/0:23,0:23:69.20:0,69,818	0/0:24,0:24:63.19:0,63,755	0/0:30,0:30:87.23:0,87,1016	0/0:11,0:11:33.08:0,33,374
chr10	88218703	.	TAAAA	T	4451.16	PASS	AB=0.647;AC=19;AF=0.339;AN=56;BaseQRankSum=0.606;DP=555;FS=3.109;HRun=15;HaplotypeScore=127.2923;InbreedingCoeff=0.9319;MQ=70.52;MQ0=4;MQRankSum=-8.720;QD=26.03;ReadPosRankSum=4.527;VQSLOD=3.7179;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,25:39:71.84:961,72,0	1/1:0,5:5:15.05:204,15,0	0/0:40,0:23:29.99:0,30,535	0/0:33,0:16:32.73:0,33,370	0/0:11,0:15:33.11:0,33,634	0/0:10,0:21:33.07:0,33,439	0/0:7,0:24:60.09:0,60,808	1/1:8,10:18:32.85:422,33,0	0/0:10,0:19:51.17:0,51,923	1/1:2,12:14:36.05:490,36,0	0/1:5,5:11:1.72:153,0,2	0/0:7,0:15:36.07:0,36,507	0/0:5,0:16:30.10:0,30,557	0/0:6,0:14:32.84:0,33,352	0/0:5,0:20:33.11:0,33,662	0/0:6,0:10:18.06:0,18,380	1/1:8,23:31:72.07:947,72,0	0/0:8,0:24:35.53:0,36,397	0/0:19,0:24:42.14:0,42,857	0/0:10,0:22:49.05:0,49,903	1/1:4,11:17:22.83:290,23,0	0/0:5,0:16:39.01:0,39,521	0/0:7,0:16:24.97:0,25,450	0/0:11,0:23:42.14:0,42,829	1/1:4,11:15:32.97:428,33,0	1/1:3,14:18:35.92:473,36,0	0/0:9,0:25:54.13:0,54,919	1/1:1,2:3:6.01:82,6,0
chr10	88218762	.	CCT	C	5265.11	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.648;DP=561;FS=16.042;HRun=0;HaplotypeScore=103.2421;InbreedingCoeff=0.9903;MQ=79.55;MQ0=0;MQRankSum=-6.454;QD=41.46;ReadPosRankSum=1.513;VQSLOD=5.2867;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:39:99:1579,102,0	1/1:0,8:8:21.07:339,21,0	0/0:9,0:9:23.65:0,24,487	0/0:24,0:24:55.86:0,56,973	0/0:9,0:9:24.03:0,24,442	0/0:13,0:13:33.11:0,33,670	0/0:21,0:21:60.21:0,60,1172	0/0:28,0:28:81.26:0,81,1565	0/0:24,0:23:69.14:0,69,1317	1/1:0,26:26:78.27:1252,78,0	1/1:0,11:11:33.11:533,33,0	0/0:24,0:24:72.25:0,72,1414	0/0:18,0:18:48.11:0,48,931	0/0:23,0:23:66.17:0,66,1297	0/0:21,0:21:54.19:0,54,1082	0/0:4,0:4:12.04:0,12,228	1/1:0,25:25:63.21:979,63,0	0/0:28,0:28:75.10:0,75,1509	0/0:28,0:28:81.28:0,81,1638	0/0:16,0:16:48.16:0,48,958	0/0:24,0:24:69.24:0,69,1400	0/0:21,0:21:60.21:0,60,1204	0/0:17,0:17:48.16:0,48,972	0/0:21,0:21:60.19:0,60,1138	1/1:0,17:17:36.12:584,36,0	0/0:30,0:30:47.62:0,48,1723	0/0:25,0:24:69.21:0,69,1304	0/0:6,0:6:18.06:0,18,365
chr10	88219504	.	GAAAT	G	6017.52	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=9.181;DP=558;FS=28.507;HRun=0;HaplotypeScore=95.3524;InbreedingCoeff=0.9076;MQ=54.31;MQ0=6;MQRankSum=-1.254;QD=30.70;ReadPosRankSum=3.951;VQSLOD=2.8290;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:60.16:0,60,1192	1/1:1,14:15:24.08:424,24,0	0/0:13,0:9:27.09:0,27,641	0/1:12,0:7:6.87:7,0,266	0/0:27,0:27:75.21:0,75,1660	0/0:17,0:17:39.13:0,39,975	0/0:22,0:21:45.11:0,45,1011	0/0:31,0:26:75.21:0,75,1714	0/0:16,0:16:42.14:0,42,1066	1/1:4,22:24:58.78:1023,59,0	1/1:3,15:17:33.11:583,33,0	0/0:20,0:20:54.19:0,54,1359	0/0:22,0:22:42.12:0,42,928	0/0:15,0:15:36.12:0,36,873	0/0:21,0:21:60.19:0,60,1410	0/0:12,0:12:33.10:0,33,747	1/1:5,23:27:44.99:794,45,0	0/0:30,0:30:78.22:0,78,1885	1/1:3,15:17:42.11:675,42,0	1/1:2,16:18:27.09:462,27,0	0/0:9,0:9:12.04:0,12,306	0/0:14,0:14:29.95:0,30,541	0/0:16,0:16:42.56:0,43,945	0/0:23,0:23:57.17:0,57,1310	1/1:3,27:30:60.20:1043,60,0	0/0:23,1:24:10.17:0,10,1306	1/1:2,29:31:57.20:1007,57,0	0/0:4,0:4:9.03:0,9,226
chr10	88220547	.	ATGTG	A	4587.76	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=3.926;DP=567;FS=0.000;HRun=0;HaplotypeScore=125.9262;InbreedingCoeff=0.8184;MQ=56.20;MQ0=6;MQRankSum=-2.435;QD=18.65;ReadPosRankSum=1.427;VQSLOD=4.2412;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:21.05:221,21,0	0/0:2,0:5:8.23:0,8,37	0/0:20,0:13:29.97:0,30,613	0/0:10,0:7:21.07:0,21,410	1/1:6,17:22:42.14:704,42,0	0/0:16,0:17:38.83:0,39,836	0/0:21,0:21:45.12:0,45,960	0/1:24,0:23:29.50:162,0,29	1/1:2,17:19:39.13:655,39,0	0/0:7,0:24:46.15:0,46,205	0/0:4,0:20:32.01:0,32,141	0/0:21,0:21:48.16:0,48,1105	1/1:1,8:9:15.05:252,15,0	0/0:17,0:17:48.16:0,48,1160	1/1:3,21:24:48.16:805,48,0	1/1:2,9:11:21.07:353,21,0	0/0:6,0:34:44.44:0,44,218	0/0:24,0:24:63.69:0,64,1485	0/0:8,0:18:36.56:0,37,575	0/0:9,0:25:54.11:0,54,958	1/1:18,0:18:0.47:1,0,0	0/0:14,0:14:39.13:0,39,912	1/1:0,18:18:24.11:402,24,0	1/1:4,17:21:27.09:453,27,0	0/0:6,0:25:38.42:0,38,174	1/1:32,0:33:8.53:445,9,0	0/0:6,0:24:54.10:0,54,907	0/1:13,0:12:4.96:136,0,5
chr10	88220565	.	GTGTA	G	3892.96	PASS	AB=0.934;AC=19;AF=0.339;AN=56;BaseQRankSum=6.849;DP=585;FS=0.000;HRun=0;HaplotypeScore=128.5084;InbreedingCoeff=0.5303;MQ=58.35;MQ0=7;MQRankSum=-2.097;QD=14.69;ReadPosRankSum=1.575;VQSLOD=3.3076;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,22:33:21.07:341,21,0	0/0:6,0:6:17.86:0,18,128	0/0:20,0:14:10.49:0,10,593	0/1:16,0:13:8.85:9,0,331	1/1:20,0:19:20.04:370,20,0	0/0:16,0:16:44.23:0,44,905	0/0:25,0:25:63.05:0,63,1264	1/1:19,2:20:31.79:506,32,0	1/1:18,0:18:38.99:355,39,0	0/0:19,0:19:13.86:0,14,248	0/0:23,0:23:43.85:0,44,307	0/0:18,0:18:51.11:0,51,1115	0/1:13,0:13:71.95:105,0,72	0/0:17,0:17:51.14:0,51,1224	0/1:26,0:26:58.97:354,0,59	0/1:10,0:10:1.01:154,0,1	0/0:38,0:38:61.75:0,62,482	0/0:29,0:28:60.86:0,61,1728	0/0:17,0:16:21.69:0,22,616	0/0:24,0:24:54.16:0,54,1019	0/1:3,20:23:0:0,0,0	0/0:21,0:21:62.11:0,62,1108	0/1:20,0:20:18.96:186,0,19	0/1:24,0:24:53.97:218,0,54	0/0:24,0:24:53.22:0,53,377	1/1:29,1:30:65.12:1052,65,0	0/0:23,0:22:54.09:0,54,982	1/1:6,5:10:15.05:244,15,0
chr10	88220567	.	GTA	G	2000.11	PASS	AB=0.986;AC=16;AF=0.286;AN=56;BaseQRankSum=7.281;DP=585;FS=5.213;HRun=0;HaplotypeScore=116.5194;InbreedingCoeff=0.3962;MQ=58.72;MQ0=5;MQRankSum=-2.356;QD=7.49;ReadPosRankSum=-1.217;VQSLOD=2.4743;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,7:32:21.04:213,21,0	0/1:6,0:6:27.88:28,0,49	0/0:18,0:14:10.41:0,10,403	0/1:17,0:15:5.85:6,0,265	0/0:21,0:20:25.77:0,26,119	0/0:16,0:16:32.36:0,32,655	0/0:24,0:24:63.04:0,63,913	1/1:18,3:20:53.02:443,53,0	0/0:18,0:18:15.92:0,16,76	0/1:19,0:19:4.69:176,0,5	0/1:23,0:23:54.16:103,0,54	0/0:18,0:18:51.10:0,51,813	0/0:13,0:13:16.80:0,17,123	0/0:18,0:18:54.14:0,54,897	0/0:26,0:26:41.76:0,42,226	0/0:11,0:11:11.32:0,11,82	0/1:38,1:39:99:129,0,144	0/0:29,0:28:58.28:0,58,1189	0/0:17,0:17:4.33:0,4,348	0/0:23,0:23:54.01:0,54,614	0/1:20,2:22:0:0,0,0	0/0:21,0:21:62.10:0,62,819	0/0:21,0:21:19.71:0,20,118	0/1:24,0:24:0.14:0,0,117	0/1:24,0:24:48.47:104,0,48	1/1:13,17:30:86.44:832,86,0	0/0:23,0:22:54.04:0,54,583	1/1:7,3:9:15:137,15,0
chr10	88220574	.	TGTGTGCGC	T	3422.19	PASS	AB=0.941;AC=9;AF=0.161;AN=56;BaseQRankSum=5.464;DP=595;FS=3.070;HRun=0;HaplotypeScore=174.4707;InbreedingCoeff=0.8271;MQ=59.40;MQ0=5;MQRankSum=-8.943;QD=28.52;ReadPosRankSum=-2.272;VQSLOD=3.2328;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:27.05:652,27,0	0/0:6,0:6:18.06:0,18,553	0/0:19,0:14:34.43:0,34,917	0/0:16,0:15:18.13:0,18,653	0/0:24,0:23:50.55:0,51,1255	0/0:17,0:17:44.88:0,45,1725	0/0:26,0:26:69.24:0,69,2561	1/1:20,1:20:18.83:719,19,0	0/0:19,0:19:42.14:0,42,992	0/0:16,0:16:48.10:0,48,1513	0/0:22,0:22:51.16:0,51,1514	0/0:15,0:15:42.13:0,42,1726	0/0:14,0:14:26.15:0,26,811	0/0:18,0:18:54.19:0,54,2179	0/0:28,0:28:72.21:0,72,1790	0/0:13,0:13:29.69:0,30,765	0/0:37,0:37:78.27:0,78,2696	0/0:30,0:29:87.28:0,87,3443	0/0:20,0:20:60.18:0,60,1764	0/0:23,0:23:66.23:0,66,2398	1/1:25,0:25:5.99:49,6,0	0/0:21,0:21:63.22:0,63,2303	0/0:21,0:21:38.71:0,39,943	0/0:24,0:24:48.07:0,48,1189	0/0:24,0:24:57.20:0,57,2028	0/1:30,2:32:99:1627,0,111	0/0:21,0:20:50.48:0,50,2253	1/1:9,1:9:15.05:375,15,0
chr10	88220576	.	TGTGCGC	T	2457.21	PASS	AB=0.696;AC=9;AF=0.161;AN=56;BaseQRankSum=7.643;DP=594;FS=3.888;HRun=0;HaplotypeScore=158.8178;InbreedingCoeff=0.8307;MQ=60.27;MQ0=5;MQRankSum=-8.930;QD=20.82;ReadPosRankSum=-1.598;VQSLOD=2.8977;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,7:30:27.06:462,27,0	0/0:6,0:6:18.06:0,18,460	0/0:19,0:15:27.37:0,27,656	0/0:17,0:15:29.28:0,29,494	0/0:24,0:23:56.97:0,57,1147	0/0:15,0:15:44.89:0,45,1429	0/0:27,0:27:72.25:0,72,2228	1/1:18,2:19:32.85:609,33,0	0/0:20,0:20:45.15:0,45,946	0/0:16,0:16:40.75:0,41,1142	0/0:23,0:23:52.30:0,52,1178	0/0:14,0:14:39.13:0,39,1384	0/0:14,0:14:33.01:0,33,773	0/0:18,0:18:54.17:0,54,1790	0/0:26,0:26:72.15:0,72,1667	0/0:12,0:12:33.03:0,33,727	0/0:37,0:37:81.28:0,81,2306	0/0:30,0:29:84.29:0,84,2798	0/0:21,0:21:59.66:0,60,1474	0/0:24,0:24:69.21:0,69,2015	1/1:24,2:26:5.99:49,6,0	0/0:21,0:21:63.20:0,63,1970	0/0:21,0:21:38.71:0,39,887	0/0:25,0:25:51.05:0,51,1146	0/0:24,0:24:57.02:0,57,1587	0/1:18,14:32:99:1222,0,124	0/0:22,0:21:56.81:0,57,1872	1/1:8,2:9:15.05:273,15,0
chr10	88221135	.	CAA	C	489.78	PASS	AB=0.933;AC=11;AF=0.196;AN=56;BaseQRankSum=-0.121;DP=419;FS=1.529;HRun=11;HaplotypeScore=91.6542;InbreedingCoeff=0.3227;MQ=71.61;MQ0=23;MQRankSum=-0.667;QD=5.97;ReadPosRankSum=2.266;VQSLOD=-0.0356;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:16:15.20:17,0,15	0/0:2,0:1:0:0,0,0	0/0:44,0:19:13.25:0,13,125	0/0:31,0:12:0.39:0,0,79	0/0:12,0:10:7.83:0,8,71	0/0:20,0:18:11.16:0,11,128	0/0:12,0:12:6.89:0,7,54	0/1:12,4:15:10.50:221,0,11	0/0:10,0:10:9.28:0,9,92	0/0:23,0:20:1.35:0,1,12	0/0:20,0:20:9.90:0,10,52	0/1:11,0:11:15.88:16,0,19	0/0:7,0:7:14.22:0,14,98	0/0:8,0:7:4.12:0,4,18	0/0:10,0:10:18.81:0,19,166	0/0:4,0:4:6:0,6,54	0/0:29,0:27:3.71:0,4,76	0/0:22,0:18:7.35:0,7,51	0/0:16,0:16:12.66:0,13,124	0/0:21,0:20:32.29:0,32,283	1/1:8,1:7:5.71:33,6,0	0/0:9,0:9:6.87:0,7,50	0/0:9,0:9:2.91:0,3,28	0/0:2,0:2:0.47:0,0,1	1/1:12,0:10:2.37:7,2,0	1/1:9,3:13:32.97:316,33,0	0/0:25,0:25:34.63:0,35,280	1/1:3,0:2:2.92:17,3,0
chr10	88221139	.	A	AC	468.25	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=1.207;DP=409;FS=14.889;HRun=0;HaplotypeScore=92.0328;InbreedingCoeff=0.8273;MQ=65.56;MQ0=32;MQRankSum=-3.956;QD=12.32;ReadPosRankSum=1.881;VQSLOD=3.6738;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:15:31.36:0,31,206	0/0:2,0:1:3:0,3,27	0/0:47,0:16:32.27:0,32,207	0/0:38,0:13:12.54:0,13,124	0/0:10,0:8:17.47:0,17,123	0/0:21,0:18:45.14:0,45,317	0/0:8,0:8:15.02:0,15,139	1/1:9,6:14:25.97:235,26,0	0/0:9,0:9:21.79:0,22,157	0/0:20,0:16:40.28:0,40,330	0/0:18,0:18:46.04:0,46,351	0/0:6,0:6:14.55:0,15,128	0/0:7,0:7:16.01:0,16,110	0/0:10,0:9:24.71:0,25,153	0/0:10,0:10:23.73:0,24,175	0/0:4,0:4:12:0,12,107	0/0:28,0:26:68.48:0,68,558	0/0:20,0:16:25.72:0,26,180	0/0:19,0:16:31.19:0,31,225	0/0:21,0:20:55.20:0,55,377	1/1:5,2:5:11.96:94,12,0	0/0:7,0:7:19.95:0,20,160	0/0:8,0:7:12.60:0,13,87	0/0:2,0:2:5.91:0,6,38	0/0:12,0:9:22.96:0,23,168	1/1:10,2:12:35.60:261,36,0	0/0:26,0:26:71.62:0,72,567	1/1:3,1:2:3:25,3,0
chr10	88221142	.	A	AAC	504.83	PASS	AB=0.864;AC=8;AF=0.143;AN=56;BaseQRankSum=1.967;DP=397;FS=11.978;HRun=0;HaplotypeScore=97.2006;InbreedingCoeff=0.4895;MQ=59.38;MQ0=40;MQRankSum=-2.426;QD=5.87;ReadPosRankSum=1.798;VQSLOD=2.4294;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:14:17:0,17,134	0/0:2,0:1:3:0,3,27	0/1:48,0:14:10.81:11,0,86	0/0:38,0:11:4.19:0,4,60	0/0:8,0:6:9.20:0,9,53	0/0:21,0:18:44.64:0,45,322	0/0:7,0:7:12:0,12,108	0/1:10,6:14:13.63:233,0,14	0/0:9,0:9:22.70:0,23,170	0/0:16,0:12:31.77:0,32,237	0/0:18,0:17:45.03:0,45,325	0/0:6,0:6:10.68:0,11,70	0/0:8,0:8:20.54:0,21,140	0/0:8,0:7:18.63:0,19,105	0/0:11,0:11:20.20:0,20,161	0/0:3,0:3:9:0,9,78	0/0:24,0:22:58.47:0,58,469	0/0:20,0:16:20.21:0,20,157	0/0:20,0:17:34.72:0,35,222	0/0:21,0:20:45.33:0,45,345	1/1:4,2:3:6.01:63,6,0	0/0:5,0:4:11.90:0,12,92	0/0:10,0:8:11.33:0,11,69	0/0:4,0:3:5.91:0,6,38	0/0:11,0:8:22.19:0,22,156	1/1:10,2:12:33.88:301,34,0	0/0:25,0:25:67.32:0,67,511	1/1:3,1:2:3.01:32,3,0
chr10	88221146	.	AC	A	3851.75	PASS	AB=0.909;AC=54;AF=0.964;AN=56;BaseQRankSum=-4.173;DP=406;FS=2.541;HRun=1;HaplotypeScore=78.0453;InbreedingCoeff=-0.0121;MQ=53.63;MQ0=44;MQRankSum=2.710;QD=9.49;ReadPosRankSum=1.931;VQSLOD=1.5777;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:16:16.59:178,17,0	1/1:3,0:1:3:27,3,0	0/1:47,2:11:8.81:9,0,23	0/1:35,7:10:18.77:24,0,19	1/1:8,0:6:8.06:35,8,0	1/1:17,2:16:42.57:303,43,0	1/1:6,0:6:8.87:67,9,0	1/1:17,0:15:5.92:89,6,0	1/1:9,0:9:21.71:146,22,0	1/1:16,0:12:32.26:256,32,0	1/1:17,1:17:50.24:385,50,0	1/1:4,0:4:7.24:45,7,0	1/1:8,0:8:12.22:51,12,0	1/1:8,0:7:20.23:130,20,0	1/1:10,0:10:16.37:110,16,0	1/1:3,0:3:8.34:48,8,0	1/1:23,0:21:56.27:442,56,0	1/1:22,0:19:29.61:221,30,0	1/1:21,0:17:25.02:213,25,0	1/1:23,0:22:34.49:237,34,0	1/1:7,0:3:5.17:21,5,0	1/1:4,0:3:6.81:41,7,0	1/1:9,0:7:5.86:69,6,0	1/1:5,0:4:6.39:40,6,0	1/1:11,0:8:23.91:204,24,0	1/1:12,0:11:24:91,24,0	1/1:25,0:25:45.19:357,45,0	1/1:5,0:3:2.80:13,3,0
chr10	88221151	.	A	AC	167.55	PASS	AB=0.885;AC=7;AF=0.125;AN=56;BaseQRankSum=1.158;DP=437;FS=2.470;HRun=0;HaplotypeScore=94.6687;InbreedingCoeff=0.2777;MQ=46.68;MQ0=52;MQRankSum=-0.352;QD=2.39;ReadPosRankSum=-2.074;VQSLOD=2.3018;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:18:4.05:0,4,95	0/0:3,0:1:3:0,3,27	0/0:57,0:9:4.02:0,4,41	0/0:53,0:8:5.76:0,6,34	0/0:9,0:7:12.89:0,13,68	0/0:19,0:16:44.59:0,45,332	0/0:6,0:6:9.01:0,9,83	0/1:12,3:13:11.40:106,0,11	0/0:9,0:9:17.04:0,17,140	0/0:18,0:12:32.85:0,33,270	0/0:18,0:17:45.55:0,46,342	0/0:4,0:4:8.86:0,9,67	0/0:9,0:9:12.52:0,13,66	0/0:8,0:7:20.28:0,20,130	0/0:10,0:10:26.53:0,27,179	0/0:2,0:2:6:0,6,53	0/0:21,0:19:50.50:0,50,399	0/0:22,0:19:28.31:0,28,215	0/1:27,1:20:25.25:25,0,120	0/0:22,1:22:12.87:0,13,225	1/1:8,0:3:4.07:12,4,0	0/0:4,0:3:7.97:0,8,46	0/0:11,0:9:1.24:0,1,54	0/0:5,0:4:5.91:0,6,38	0/0:10,0:7:20.15:0,20,154	1/1:12,1:11:15.20:133,15,0	0/0:25,0:25:44.40:0,44,369	0/1:5,1:4:8.66:17,0,9
chr10	88221168	.	A	AC	181.20	PASS	AB=0.879;AC=3;AF=0.056;AN=54;BaseQRankSum=5.116;DP=401;FS=2.996;HRun=0;HaplotypeScore=93.5112;InbreedingCoeff=0.1232;MQ=30.17;MQ0=49;MQRankSum=-3.692;QD=3.55;ReadPosRankSum=0.494;VQSLOD=3.4066;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:14,8:20:13.98:254,0,14	./.	0/0:58,0:7:10.69:0,11,142	0/0:59,0:6:6.02:0,6,78	0/0:13,0:11:20.13:0,20,154	0/1:17,0:16:2:2,0,137	0/0:6,0:6:6.48:0,6,56	0/0:14,0:11:2.13:0,2,104	0/0:6,0:6:13.67:0,14,90	0/0:8,0:2:3.62:0,4,11	0/1:10,0:9:0:0,0,0	0/0:3,0:3:5.84:0,6,40	0/0:9,0:9:12.71:0,13,80	0/0:8,0:8:13.22:0,13,98	0/0:12,0:12:23.82:0,24,151	0/0:3,0:3:9.01:0,9,91	0/0:5,0:3:2.22:0,2,7	0/0:22,0:20:4.80:0,5,135	0/0:36,0:24:36.91:0,37,357	0/0:18,0:18:23.31:0,23,276	0/0:9,0:4:5.85:0,6,17	0/0:2,0:1:2.92:0,3,17	0/0:11,0:9:14.68:0,15,107	0/0:6,0:5:5.93:0,6,40	0/0:3,0:1:0.47:0,0,1	0/0:10,0:8:13.05:0,13,163	0/0:22,0:21:51.86:0,52,351	0/0:5,0:4:8.89:0,9,64
chr10	88221174	.	ACAACAAAAAAC	A	2886.64	PASS	AB=0.950;AC=33;AF=0.635;AN=52;BaseQRankSum=-6.656;DP=382;FS=1.192;HRun=0;HaplotypeScore=123.6605;InbreedingCoeff=-0.2496;MQ=31.62;MQ0=36;MQRankSum=3.089;QD=10.93;ReadPosRankSum=-7.554;VQSLOD=0.1252;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:18:13.73:14,0,101	1/1:3,0:2:6.02:111,6,0	0/0:56,0:5:10.60:0,11,68	0/0:60,0:7:10.91:0,11,80	0/1:13,0:12:99:265,0,156	0/1:16,0:14:39.17:39,0,246	0/1:5,0:5:1.44:1,0,62	1/1:10,0:10:26.52:254,27,0	0/1:5,0:6:53.59:152,0,54	1/1:9,0:4:12.04:227,12,0	1/1:1,12:12:14.92:140,15,0	0/1:4,0:4:44.16:44,0,79	0/1:7,0:8:44.23:44,0,110	0/1:8,0:7:16.62:17,0,119	0/1:12,0:12:99:120,0,303	0/1:4,0:4:66.77:101,0,67	1/1:7,0:6:18.06:321,18,0	0/1:17,0:18:85.64:86,0,183	0/1:32,0:22:31.51:313,0,32	0/1:17,0:19:65.06:65,0,398	1/1:7,0:3:9.03:119,9,0	./.	0/1:4,0:6:29.99:46,0,30	1/1:4,0:4:7.11:96,7,0	./.	1/1:10,0:8:15.92:216,16,0	0/1:19,0:19:99:124,0,381	1/1:5,0:4:9.03:135,9,0
chr10	88221175	.	C	CCAAA	954.61	PASS	AB=0.964;AC=26;AF=0.481;AN=54;BaseQRankSum=-0.547;DP=397;FS=16.579;HRun=0;HaplotypeScore=113.5270;InbreedingCoeff=-0.1325;MQ=34.80;MQ0=35;MQRankSum=-1.782;QD=4.03;ReadPosRankSum=1.246;VQSLOD=1.3790;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:17:7.93:8,0,49	1/1:4,0:3:2.98:22,3,0	0/0:56,0:6:13.49:0,13,152	0/0:62,0:9:9.83:0,10,138	0/1:12,0:12:31.90:32,0,51	0/1:16,0:14:8.18:238,0,8	1/1:5,0:5:5.79:36,6,0	0/1:11,0:10:29.17:32,0,29	0/0:6,0:6:1.09:0,1,49	1/1:10,0:5:1.89:3,2,0	1/1:13,0:12:2.97:20,3,0	1/1:4,0:4:4.12:18,4,0	0/0:8,0:8:2.80:0,3,43	0/1:6,0:7:22.99:64,0,23	0/0:12,0:12:12.20:0,12,92	0/1:4,0:4:10.23:10,0,51	1/1:13,0:12:7.25:70,7,0	0/1:9,5:19:21.47:249,0,21	0/1:30,0:23:94.94:114,0,95	0/1:18,0:19:44.15:44,0,148	0/1:7,0:3:6.85:7,0,7	./.	0/0:8,0:7:7.54:0,8,31	0/0:5,0:4:1.31:0,1,14	0/1:3,0:2:0:0,0,0	0/1:9,0:8:9.08:9,0,13	0/1:21,0:20:99:125,0,141	0/1:4,0:4:0.44:0,0,16
chr10	88221176	.	AAC	A	1923.76	PASS	AB=0.970;AC=34;AF=0.630;AN=54;BaseQRankSum=-2.418;DP=403;FS=2.292;HRun=0;HaplotypeScore=94.4286;InbreedingCoeff=0.0804;MQ=35.54;MQ0=32;MQRankSum=2.131;QD=7.29;ReadPosRankSum=-2.840;VQSLOD=2.9363;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:19:19.40:274,19,0	1/1:5,0:4:7.53:50,8,0	0/0:59,0:6:14.22:0,14,112	0/0:61,0:9:6.96:0,7,74	0/1:14,0:13:63.90:74,0,64	1/1:16,0:14:21.27:104,21,0	0/0:5,0:5:0.03:0,0,2	1/1:9,2:10:18.15:115,18,0	0/1:7,0:7:0.40:25,0,0	1/1:13,0:9:15.11:95,15,0	1/1:12,0:12:5.92:38,6,0	0/1:4,0:4:12.78:19,0,13	0/1:8,0:8:10.07:32,0,10	0/1:8,0:7:17.98:18,0,18	0/1:12,0:12:38.07:82,0,38	0/1:4,0:4:15.60:16,0,40	1/1:18,0:17:23.91:134,24,0	1/1:17,0:17:17.12:79,17,0	1/1:29,3:22:22.96:321,23,0	0/1:14,5:19:1.42:272,0,1	1/1:6,1:3:8.74:67,9,0	./.	0/0:8,0:7:1.56:0,2,28	0/0:5,0:4:1.47:0,1,7	1/1:2,0:2:1.72:4,2,0	0/1:10,0:8:4.37:71,0,4	0/1:18,2:19:47.05:155,0,47	1/1:5,0:4:6.24:32,6,0
chr10	88221181	.	A	AC	645.72	PASS	AB=0.876;AC=7;AF=0.130;AN=54;BaseQRankSum=1.377;DP=416;FS=19.465;HRun=0;HaplotypeScore=104.9927;InbreedingCoeff=-0.0864;MQ=36.73;MQ0=25;MQRankSum=-4.722;QD=5.61;ReadPosRankSum=3.647;VQSLOD=2.1603;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:7,12:20:12.62:319,0,13	0/0:8,0:8:21.33:0,21,157	0/0:62,0:8:4.17:0,4,85	0/0:65,0:11:14.65:0,15,117	0/1:15,1:15:32.23:32,0,91	0/0:15,0:14:6.59:0,7,102	0/0:5,0:5:5.59:0,6,26	0/0:10,0:9:15.75:0,16,81	0/1:7,1:8:19.75:20,0,90	0/0:15,0:11:27.53:0,28,193	0/0:12,0:12:12.29:0,12,77	0/0:4,0:4:4.87:0,5,17	0/0:8,0:8:11.04:0,11,62	0/0:8,0:7:15.04:0,15,77	0/0:11,0:11:14.59:0,15,120	0/0:4,0:4:8.65:0,9,76	0/0:21,0:21:50.45:0,50,367	0/0:17,0:18:2.32:0,2,82	0/1:25,4:21:34.49:238,0,34	0/1:16,3:19:99:132,0,169	0/0:5,0:3:5.27:0,5,31	./.	0/0:8,0:8:11.60:0,12,67	0/1:4,0:3:0.87:19,0,1	0/0:4,0:4:10.19:0,10,70	0/0:11,0:10:18.88:0,19,143	0/1:17,1:18:9.42:9,0,198	0/0:5,0:4:7.23:0,7,33
chr10	88221185	.	CA	C	247.75	PASS	AB=0.844;AC=13;AF=0.232;AN=56;BaseQRankSum=1.937;DP=418;FS=3.314;HRun=15;HaplotypeScore=102.0459;InbreedingCoeff=0.1095;MQ=42.32;MQ0=20;MQRankSum=-3.433;QD=1.48;ReadPosRankSum=2.708;VQSLOD=-0.1631;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:31.90:0,32,152	0/0:9,0:9:18.28:0,18,120	0/0:63,1:10:16.80:0,17,102	0/1:56,2:10:1.22:1,0,42	0/0:16,0:17:2.45:0,2,43	0/0:15,0:14:1.11:0,1,44	1/1:6,0:6:1.35:4,1,0	0/1:11,1:12:4.43:62,0,4	0/0:7,0:7:3.26:0,3,40	0/0:16,0:13:25.42:0,25,158	0/0:13,0:13:3.45:0,3,23	0/0:2,0:5:8.93:0,9,67	0/0:8,0:8:6.93:0,7,32	0/1:6,1:6:7.51:9,0,8	0/0:10,0:11:11.50:0,12,66	0/0:3,0:3:6.78:0,7,39	0/0:22,0:22:21.43:0,21,112	0/0:19,0:20:4.57:0,5,58	0/1:21,3:20:31.86:40,0,32	0/1:11,6:17:55.03:94,0,55	1/1:2,1:2:4.76:24,5,0	0/0:2,0:2:3.85:0,4,12	0/0:5,0:6:5.35:0,5,30	0/0:4,0:4:5.53:0,6,22	0/0:7,0:7:6.84:0,7,34	0/1:5,5:12:9.05:91,0,9	0/1:18,1:19:19.26:19,0,63	1/1:2,2:3:7.90:41,8,0
chr10	88221447	.	A	AC	1256.79	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.929;DP=486;FS=3.137;HRun=0;HaplotypeScore=115.9414;InbreedingCoeff=0.9354;MQ=58.50;MQ0=4;MQRankSum=-5.416;QD=17.95;ReadPosRankSum=2.544;VQSLOD=6.0820;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:4.22:0,4,36	0/0:7,0:7:21:0,21,195	0/0:37,0:13:26.65:0,27,221	0/0:26,0:12:12.61:0,13,146	0/0:19,0:19:51.89:0,52,399	0/0:15,0:15:24.71:0,25,258	0/0:14,0:14:26.62:0,27,201	1/1:26,8:33:62.10:698,62,0	0/0:11,0:11:31.65:0,32,240	0/0:24,0:24:58.78:0,59,475	0/0:26,0:26:52.20:0,52,373	0/0:10,0:10:29.06:0,29,203	0/0:19,0:19:42.68:0,43,326	0/0:12,0:12:32.66:0,33,225	0/0:11,0:11:31.72:0,32,257	0/0:16,0:16:42.55:0,43,332	0/0:22,0:22:50.72:0,51,428	0/0:19,0:19:34.36:0,34,226	0/0:21,0:20:44.02:0,44,383	0/0:26,0:26:61.41:0,61,436	1/1:9,1:10:15.75:132,16,0	0/0:8,0:8:22.26:0,22,149	0/0:12,0:12:27.72:0,28,214	0/0:17,0:17:43.90:0,44,328	0/0:6,0:6:13.96:0,14,100	1/1:12,8:20:55.55:466,56,0	0/0:18,0:17:20.53:0,21,183	1/1:1,3:6:14.81:118,15,0
chr10	88221455	.	AAC	A	4852.27	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-6.313;DP=509;FS=24.376;HRun=0;HaplotypeScore=111.8733;InbreedingCoeff=-0.2046;MQ=62.38;MQ0=5;MQRankSum=3.845;QD=9.53;ReadPosRankSum=-6.286;VQSLOD=1.9631;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:21,1:22:21.75:124,22,0	1/1:6,1:7:20.49:190,20,0	0/1:43,0:15:7.98:8,0,90	0/1:28,0:14:25.63:26,0,112	0/1:19,0:19:7.59:206,0,8	0/1:15,0:15:1.66:106,0,2	0/1:15,0:15:28.99:57,0,29	1/1:30,0:29:12.08:148,12,0	1/1:11,0:11:3.10:86,3,0	1/1:3,26:29:79.41:677,79,0	1/1:5,20:25:54.65:370,55,0	0/1:14,0:14:4.21:178,0,4	1/1:18,0:18:13.55:157,14,0	0/1:13,0:13:5.78:130,0,6	1/1:9,1:10:11.99:165,12,0	1/1:16,0:16:15.47:181,15,0	1/1:21,1:22:52.80:390,53,0	0/1:16,0:16:7.64:97,0,8	1/1:21,0:20:51.03:302,51,0	1/1:27,0:27:54.43:369,54,0	1/1:12,0:12:16.24:161,16,0	0/1:9,0:9:14.09:102,0,14	1/1:14,0:14:14.04:147,14,0	0/1:18,0:18:3.08:128,0,3	1/1:6,1:7:17.89:160,18,0	1/1:20,0:20:3.38:71,3,0	0/1:21,0:20:13.24:87,0,13	1/1:6,0:6:4.39:28,4,0
chr10	88221456	.	AC	A	6853.87	PASS	AB=0.915;AC=54;AF=0.964;AN=56;BaseQRankSum=-4.875;DP=511;FS=6.699;HRun=1;HaplotypeScore=98.5182;InbreedingCoeff=0.1992;MQ=60.31;MQ0=5;MQRankSum=-1.523;QD=13.41;ReadPosRankSum=1.157;VQSLOD=3.8074;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:52.13:244,52,0	1/1:6,1:7:20.96:174,21,0	0/1:41,2:13:4.17:4,0,91	0/1:24,4:14:32.73:33,0,95	1/1:20,0:20:47.58:362,48,0	1/1:15,0:15:38.73:250,39,0	1/1:15,0:15:20.54:130,21,0	1/1:28,1:28:48.73:266,49,0	1/1:11,0:11:28.82:183,29,0	1/1:27,2:29:79.89:630,80,0	1/1:21,4:25:56.34:381,56,0	1/1:14,0:14:35.11:256,35,0	1/1:17,1:18:45.20:292,45,0	1/1:13,0:13:31.96:206,32,0	1/1:9,1:10:27.57:199,28,0	1/1:13,2:15:40.62:299,41,0	1/1:20,3:23:54.17:424,54,0	1/1:17,0:17:30.10:174,30,0	1/1:20,1:20:58.42:392,58,0	1/1:27,1:28:68.67:497,69,0	1/1:12,0:12:19.76:168,20,0	1/1:10,0:10:24.51:171,25,0	1/1:14,0:14:33.45:241,33,0	1/1:17,1:18:39.98:302,40,0	1/1:5,2:7:17.89:140,18,0	1/1:20,0:20:39.71:192,40,0	1/1:21,0:20:16.68:164,17,0	1/1:6,0:6:15.25:79,15,0
chr10	88221460	.	A	AC	527.91	PASS	AB=0.625;AC=3;AF=0.054;AN=56;BaseQRankSum=-3.461;DP=528;FS=4.034;HRun=0;HaplotypeScore=124.0090;InbreedingCoeff=-0.0574;MQ=63.37;MQ0=5;MQRankSum=3.390;QD=7.54;ReadPosRankSum=0.293;VQSLOD=3.4150;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:35.23:0,35,141	0/0:7,0:7:20.94:0,21,175	0/0:45,0:16:26.33:0,26,211	0/0:29,0:16:17.61:0,18,234	0/0:21,0:21:53.77:0,54,405	0/0:14,0:14:37.34:0,37,244	0/0:16,0:16:32.06:0,32,244	0/0:29,0:29:56.49:0,56,360	0/0:12,0:12:34.68:0,35,266	0/0:32,0:32:75.68:0,76,657	0/0:27,0:27:30.57:0,31,272	0/0:14,0:14:40.99:0,41,303	0/0:20,0:20:46.19:0,46,372	0/0:14,0:14:38.60:0,39,268	0/0:13,0:13:34.71:0,35,276	0/0:15,0:15:42.18:0,42,309	0/0:22,0:22:52.05:0,52,379	0/0:17,0:17:35.26:0,35,246	0/1:9,13:21:29.71:272,0,30	0/1:11,16:27:25.71:307,0,26	0/0:12,0:13:18.16:0,18,188	0/0:9,0:9:22.73:0,23,150	0/0:13,0:13:26.79:0,27,193	0/0:19,0:19:49.44:0,49,375	0/0:7,0:7:16.26:0,16,116	0/0:21,0:21:46.16:0,46,227	0/1:8,11:20:49.39:49,0,106	0/0:6,0:6:10.27:0,10,43
chr10	88221464	.	A	AAAAC	2932.19	PASS	AB=0.913;AC=16;AF=0.286;AN=56;BaseQRankSum=-0.490;DP=542;FS=38.558;HRun=0;HaplotypeScore=152.7941;InbreedingCoeff=-0.0460;MQ=65.23;MQ0=5;MQRankSum=-2.916;QD=11.82;ReadPosRankSum=-2.605;VQSLOD=1.4519;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:22:99:288,0,135	0/1:8,0:8:18.75:19,0,116	0/0:43,0:16:21.65:0,22,246	0/0:27,0:16:12.12:0,12,329	0/1:22,0:22:5.78:6,0,233	0/1:14,0:14:36.76:37,0,95	0/0:17,0:17:2.21:0,2,177	0/1:13,21:35:7.99:1075,0,8	0/0:12,0:12:17.79:0,18,214	0/0:30,0:32:21.06:0,21,604	0/0:25,0:26:11.24:0,11,191	0/1:16,0:16:6.70:7,0,157	0/1:20,0:20:67.71:68,0,179	0/0:14,0:14:4.80:0,5,185	0/0:13,0:14:20.23:0,20,214	0/1:16,0:17:29.38:29,0,149	0/1:20,0:21:4.46:4,0,226	0/0:17,0:17:26.22:0,26,201	0/0:23,0:22:13.36:0,13,308	0/0:25,0:25:8:0,8,169	1/1:11,2:13:30.89:400,31,0	0/0:10,0:10:1.51:0,2,134	0/0:14,0:14:15.31:0,15,101	0/0:18,0:18:12.46:0,12,247	0/1:6,0:8:56.11:57,0,56	0/1:9,10:21:0.73:788,0,1	0/1:24,0:23:21.51:22,0,132	1/1:3,1:6:4.99:289,5,0
chr10	88221743	.	TCTGATGCCCTCTGGTGCCATGAAGG	T	3052.06	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.307;DP=636;FS=17.785;HRun=0;HaplotypeScore=389.9099;InbreedingCoeff=0.9917;MQ=72.04;MQ0=0;MQRankSum=-7.089;QD=132.70;ReadPosRankSum=-0.461;VQSLOD=2.4727;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:57.20:3147,57,0	0/0:7,0:7:21.07:0,21,1991	0/0:20,0:20:54.19:0,54,3493	0/0:23,0:22:63.22:0,63,4552	0/0:24,0:24:69.24:0,69,7261	0/0:20,0:20:60.21:0,60,6107	0/0:28,0:28:84.29:0,84,8703	0/0:23,0:23:63.22:0,63,4435	0/0:29,0:29:87.30:0,87,8486	0/0:39,0:39:99:0,117,12712	0/0:21,0:21:60.21:0,60,5991	0/0:32,0:32:96.33:0,96,10739	0/0:17,0:17:48.15:0,48,4538	0/0:22,0:22:63.22:0,63,6331	0/0:24,0:24:72.23:0,72,7477	0/0:22,0:22:66.23:0,66,6814	0/0:30,0:30:90.28:0,90,8840	0/0:12,0:12:36.10:0,36,3400	0/0:20,0:20:60.20:0,60,4525	0/0:25,0:25:75.24:0,75,7591	0/0:36,0:36:99:0,108,10714	0/0:16,0:16:48.16:0,48,5653	0/0:12,0:12:36.12:0,36,3902	0/0:34,0:34:96.33:0,96,10289	0/0:19,0:19:57.20:0,57,6327	0/0:20,0:19:57.20:0,57,5960	0/0:31,0:30:93.32:0,93,9407	0/0:7,0:7:21.07:0,21,2261
chr10	88222302	.	T	TA	964.01	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-7.707;DP=460;FS=6.133;HRun=6;HaplotypeScore=43.2464;InbreedingCoeff=0.6518;MQ=77.41;MQ0=0;MQRankSum=0.612;QD=22.42;ReadPosRankSum=1.376;VQSLOD=2.5301;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:34:84.27:1057,84,0	0/0:5,0:5:12.01:0,12,116	0/1:9,0:9:9.34:9,0,118	0/0:11,0:11:20.93:0,21,189	0/0:20,0:20:57.13:0,57,581	0/0:15,0:15:42.09:0,42,424	0/0:15,0:15:42.09:0,42,428	0/0:34,0:34:81.15:0,81,816	0/0:21,0:21:63.14:0,63,643	0/0:17,0:17:45.09:0,45,455	0/0:12,0:12:36.08:0,36,367	0/0:18,0:18:48.10:0,48,489	0/0:15,0:15:42.07:0,42,415	0/0:18,0:18:45.10:0,45,459	0/0:22,0:22:60.13:0,60,612	0/0:17,0:17:45.10:0,45,459	0/0:25,0:25:75.17:0,75,765	0/0:11,0:11:30.07:0,30,306	0/0:18,0:18:51.10:0,51,514	0/0:9,0:9:27.06:0,27,275	0/0:10,0:10:30.07:0,30,306	0/0:12,0:12:36.08:0,36,366	0/0:12,0:12:36.08:0,36,367	0/0:17,0:17:48.10:0,48,484	0/0:18,0:18:51.12:0,51,520	0/0:23,0:23:60.12:0,60,601	0/0:16,0:16:45.10:0,45,457	0/0:6,0:6:18.04:0,18,184
chr10	88222539	.	CCGCCCT	C	2264.60	PASS	AB=0.962;AC=34;AF=0.654;AN=52;BaseQRankSum=-0.451;DP=215;FS=1.730;HRun=0;HaplotypeScore=76.1094;InbreedingCoeff=0.4574;MQ=76.08;MQ0=2;MQRankSum=-2.518;QD=14.33;ReadPosRankSum=-0.377;VQSLOD=2.6642;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:27.20:323,27,0	0/1:4,0:4:9.93:10,0,39	0/0:19,0:10:20.40:0,20,218	0/0:17,0:9:11.99:0,12,201	1/1:6,1:7:14.76:187,15,0	0/1:9,1:10:15.87:67,0,16	1/1:8,0:8:2.12:26,2,0	1/1:10,0:10:18.99:190,19,0	1/1:8,0:8:14.93:188,15,0	0/0:2,0:2:2.84:0,3,14	./.	1/1:7,0:7:4.88:20,5,0	1/1:9,0:9:20.70:236,21,0	1/1:6,1:7:0.73:27,1,0	1/1:8,0:8:17.24:227,17,0	1/1:7,0:7:19.73:271,20,0	0/0:12,0:12:12.82:0,13,175	0/1:14,1:15:24.98:34,0,25	0/0:1,0:1:3.01:0,3,52	./.	1/1:15,0:15:20.02:182,20,0	0/0:3,0:3:4.41:0,4,24	0/1:3,0:3:0:0,0,0	1/1:6,1:7:8.93:91,9,0	1/1:4,0:4:0.62:8,1,0	1/1:7,0:7:14.82:239,15,0	0/0:1,0:1:3.01:0,3,43	1/1:4,0:4:8.46:101,8,0
chr10	88222568	.	A	AAGG	11577.52	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.507;DP=272;FS=0.000;HRun=0;HaplotypeScore=55.0602;InbreedingCoeff=0.6633;MQ=75.84;MQ0=0;MQRankSum=-5.650;QD=46.50;ReadPosRankSum=0.899;VQSLOD=6.3186;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,17:22:45.11:955,45,0	1/1:0,2:3:3.01:69,3,0	0/0:8,0:7:17.55:0,18,260	0/0:15,0:12:21.07:0,21,348	1/1:1,10:11:27.05:569,27,0	1/1:0,13:13:27.05:573,27,0	1/1:1,13:15:30.04:614,30,0	1/1:1,11:12:33.11:740,33,0	1/1:0,7:7:21.07:481,21,0	1/1:0,6:6:18.06:379,18,0	1/1:1,3:4:6.02:138,6,0	1/1:0,7:7:15.05:341,15,0	1/1:1,4:5:9.03:207,9,0	1/1:1,9:11:21.07:484,21,0	1/1:1,6:7:15.05:344,15,0	1/1:1,7:8:21.07:483,21,0	1/1:2,20:22:30.10:689,30,0	1/1:2,12:14:33.04:699,33,0	1/1:0,6:7:18.01:280,18,0	1/1:0,4:4:9.03:207,9,0	1/1:1,22:23:50.61:1021,51,0	1/1:3,1:4:3.01:69,3,0	1/1:1,3:4:6.02:137,6,0	1/1:1,11:12:24.08:551,24,0	1/1:0,5:5:12.04:276,12,0	1/1:1,12:13:36.08:767,36,0	1/1:0,2:2:6.02:138,6,0	1/1:1,7:8:18.03:366,18,0
chr10	88223011	.	GGTTTTTTTTTT	G	1105.37	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.643;DP=529;FS=1.091;HRun=0;HaplotypeScore=181.1445;InbreedingCoeff=0.9939;MQ=74.65;MQ0=3;MQRankSum=-5.293;QD=50.24;ReadPosRankSum=0.440;VQSLOD=3.4554;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:36.12:1200,36,0	0/0:9,0:9:27.08:0,27,1180	0/0:27,0:16:41.78:0,42,1084	0/0:18,0:13:29.42:0,29,777	0/0:11,0:11:33.11:0,33,1226	0/0:16,0:16:48.16:0,48,2648	0/0:22,0:22:66.23:0,66,3045	0/0:25,0:25:70.47:0,70,2189	0/0:22,0:22:54.19:0,54,2218	0/0:24,0:24:70.48:0,70,3292	0/0:16,0:16:36.12:0,36,1560	0/0:16,0:16:48.15:0,48,2564	0/0:14,0:14:30.10:0,30,1213	0/0:16,0:16:48.16:0,48,2192	0/0:14,0:14:33.11:0,33,1344	0/0:18,0:18:39.13:0,39,1560	0/0:45,0:45:99:0,105,4821	0/0:25,0:25:75.24:0,75,3568	0/0:14,0:14:42.14:0,42,1089	0/0:21,0:21:60.19:0,60,2137	0/0:8,0:8:24.05:0,24,717	0/0:18,0:18:54.19:0,54,2877	0/0:21,0:21:59.61:0,60,2580	0/0:20,0:20:51.17:0,51,2186	0/0:14,0:13:27.09:0,27,1131	0/0:20,0:19:57.20:0,57,2343	0/0:17,0:17:48.16:0,48,2040	0/0:15,0:15:45.15:0,45,1722
chr10	88223012	.	GT	G	3547.03	PASS	AB=0.857;AC=27;AF=0.482;AN=56;BaseQRankSum=0.446;DP=526;FS=4.628;HRun=11;HaplotypeScore=75.4719;InbreedingCoeff=0.7817;MQ=74.42;MQ0=4;MQRankSum=1.478;QD=13.64;ReadPosRankSum=1.790;VQSLOD=4.0807;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:22:22.02:70,22,0	0/0:8,0:8:24.06:0,24,249	0/0:27,0:15:23.35:0,23,193	0/0:19,0:13:13.97:0,14,100	1/1:0,11:11:32.82:256,33,0	0/0:15,1:17:21.18:0,21,402	0/0:22,0:22:54.13:0,54,569	1/1:22,1:23:20.72:268,21,0	1/1:3,18:22:43.98:350,44,0	0/0:24,0:24:59.97:0,60,611	0/0:16,0:17:30.37:0,30,296	0/0:15,0:15:42.11:0,42,448	1/1:1,13:14:26.96:221,27,0	0/0:15,1:16:11.28:0,11,306	1/1:2,11:14:26.01:203,26,0	1/1:3,15:18:29.96:246,30,0	0/0:43,0:44:61:0,61,770	0/0:24,0:24:63.11:0,63,652	1/1:3,10:13:26.91:214,27,0	1/1:6,13:20:10.76:228,11,0	0/1:8,0:8:16.83:17,0,23	0/0:17,0:18:53.92:0,54,543	1/1:1,19:21:50.85:402,51,0	0/1:5,15:20:19.02:275,0,19	0/0:15,0:14:19.72:0,20,182	1/1:21,0:20:27.44:318,27,0	1/1:2,15:17:41.94:345,42,0	0/1:15,0:15:7.65:133,0,8
chr10	88223024	.	C	CT	3116.48	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-3.288;DP=533;FS=0.410;HRun=11;HaplotypeScore=76.3812;InbreedingCoeff=0.9333;MQ=65.65;MQ0=6;MQRankSum=-1.728;QD=17.31;ReadPosRankSum=-0.277;VQSLOD=4.3062;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:47.89:0,48,390	1/1:2,8:10:18.05:205,18,0	0/0:24,0:10:3.58:0,4,86	0/0:17,0:8:2.60:0,3,61	0/0:12,0:12:26.99:0,27,234	0/0:21,0:21:59.72:0,60,534	0/0:17,0:17:39.01:0,39,357	1/1:16,2:18:30.87:300,31,0	0/0:25,0:25:63.03:0,63,570	1/1:4,20:24:56.72:607,57,0	1/1:3,17:20:32.94:335,33,0	0/0:16,0:16:48.03:0,48,439	0/0:15,0:15:30.02:0,30,272	0/0:13,0:13:34.57:0,35,306	0/0:13,0:13:30.02:0,30,271	0/0:19,0:19:42.02:0,42,377	1/1:7,38:45:72.13:804,72,0	0/0:23,0:23:59.12:0,59,517	0/0:10,0:10:15.86:0,16,132	0/0:17,0:17:43.57:0,44,382	1/1:5,0:5:8.96:70,9,0	0/0:20,0:20:50.81:0,51,439	0/0:22,0:22:60.01:0,60,537	0/0:19,0:19:48.03:0,48,435	1/1:3,15:17:20.99:221,21,0	1/1:21,0:20:41.78:386,42,0	0/0:21,0:21:57:0,57,511	1/1:19,0:19:36.80:399,37,0
chr10	88223292	.	CTCTCTCTCTT	C	2716.47	PASS	AB=1.000;AC=18;AF=0.333;AN=54;BaseQRankSum=5.068;DP=594;FS=0.000;HRun=0;HaplotypeScore=163.6670;InbreedingCoeff=0.2462;MQ=54.38;MQ0=23;MQRankSum=-2.598;QD=10.53;ReadPosRankSum=-3.399;VQSLOD=1.5475;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:21:70.18:70,0,71	0/0:3,0:3:3.01:0,3,97	0/0:26,0:8:6.32:0,6,79	0/0:53,0:12:7.45:0,7,126	0/1:23,0:23:59.65:60,0,310	0/0:34,0:31:56.79:0,57,1506	0/0:29,0:27:59.94:0,60,1244	1/1:19,12:26:33.08:495,33,0	0/0:14,0:14:2.10:0,2,301	0/0:9,0:8:0.15:0,0,0	./.	0/0:18,0:17:38.99:0,39,1333	0/1:17,0:17:99:146,0,337	0/0:15,0:14:33.03:0,33,1113	0/1:30,0:30:99:177,0,256	0/1:15,0:15:73.83:74,0,197	1/1:10,0:8:1.72:4,2,0	0/0:25,0:22:29.45:0,29,1747	0/0:15,0:9:24.08:0,24,1021	0/0:32,0:32:78.21:0,78,2952	1/1:3,4:7:3.01:37,3,0	0/0:30,0:30:51.06:0,51,2237	0/1:21,0:20:99:240,0,127	0/1:27,0:25:3.34:3,0,306	0/1:9,0:9:0:0,0,0	1/1:6,21:27:54.10:1294,54,0	0/0:24,0:23:48.15:0,48,2043	1/1:3,11:14:9.03:275,9,0
chr10	88223300	.	CTT	C	4106.81	PASS	AB=0.984;AC=29;AF=0.518;AN=56;BaseQRankSum=11.836;DP=558;FS=1.857;HRun=3;HaplotypeScore=93.6947;InbreedingCoeff=0.5663;MQ=57.63;MQ0=13;MQRankSum=-0.448;QD=13.29;ReadPosRankSum=1.488;VQSLOD=0.6659;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,1:18:18.35:51,0,18	1/1:3,0:3:2.01:23,2,0	0/0:30,0:14:19.81:0,20,202	0/1:48,0:12:4.74:5,0,113	1/1:0,24:24:33.11:480,33,0	0/0:33,0:31:11.07:0,11,1154	0/0:28,0:27:43.13:0,43,996	0/1:23,0:21:99:249,0,172	1/1:0,11:11:23.84:356,24,0	1/1:7,0:6:11.73:78,12,0	1/1:6,0:5:5.99:50,6,0	0/0:18,0:17:44.42:0,44,740	1/1:0,19:19:36.12:535,36,0	0/0:14,0:13:35.27:0,35,586	1/1:0,28:28:42.14:606,42,0	1/1:0,16:16:21.07:311,21,0	1/1:7,0:6:5.64:25,6,0	0/0:23,0:21:49.42:0,49,805	0/0:15,0:9:27.07:0,27,481	0/0:34,0:34:99:0,99,1665	0/0:6,0:6:2.96:0,3,19	0/0:26,0:26:31.61:0,32,965	1/1:1,20:20:45.15:661,45,0	1/1:4,22:24:21.07:320,21,0	1/1:7,0:7:13.54:103,14,0	0/1:25,0:25:99:231,0,235	0/0:22,0:22:66.18:0,66,1102	0/1:13,0:13:21.23:21,0,35
chr10	88223410	.	G	GTC	460.41	PASS	AB=0.880;AC=9;AF=0.173;AN=52;BaseQRankSum=5.248;DP=503;FS=3.818;HRun=0;HaplotypeScore=126.6572;InbreedingCoeff=-0.0549;MQ=41.78;MQ0=44;MQRankSum=-3.651;QD=3.29;ReadPosRankSum=-6.610;VQSLOD=-0.0053;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:16:14.94:0,15,200	0/0:2,0:2:6.01:0,6,69	./.	0/0:20,0:3:6.01:0,6,82	0/0:18,1:16:15.27:0,15,140	0/1:21,5:19:85.42:85,0,88	0/0:12,2:12:8.88:0,9,117	0/0:33,0:25:66.18:0,66,864	0/0:8,1:9:8.09:0,8,158	0/1:9,0:8:62.46:70,0,62	./.	1/1:21,5:23:5.99:75,6,0	0/1:17,3:18:83.40:83,0,176	0/0:10,2:11:3.01:0,3,41	0/0:23,1:23:11.05:0,11,310	0/1:13,1:13:9.06:9,0,130	0/1:6,0:3:0.99:1,0,73	0/1:7,8:13:99:238,0,129	0/0:16,0:10:24.04:0,24,308	0/0:30,0:28:72.21:0,72,954	0/0:16,0:15:36.09:0,36,461	0/0:15,4:16:5.98:0,6,48	0/1:20,3:19:25.88:26,0,223	0/0:27,0:20:1.15:0,1,318	0/0:3,2:4:3.01:0,3,41	0/0:29,0:26:75.20:0,75,994	0/0:26,0:25:63.20:0,63,846	0/0:16,0:16:39.13:0,39,534
chr10	88223432	.	G	GTC	1926.26	PASS	AB=0.746;AC=21;AF=0.404;AN=52;BaseQRankSum=3.451;DP=538;FS=0.000;HRun=0;HaplotypeScore=145.9057;InbreedingCoeff=0.1482;MQ=43.92;MQ0=26;MQRankSum=-3.171;QD=7.55;ReadPosRankSum=2.882;VQSLOD=3.1430;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:19:8.42:58,8,0	1/1:3,0:3:2.74:12,3,0	./.	0/0:25,0:5:5.95:0,6,69	0/1:18,7:23:62.66:195,0,63	0/1:20,6:23:38.03:38,0,260	0/1:10,6:13:96.90:97,0,106	0/0:47,0:40:99:0,111,1434	1/1:4,4:8:8.06:112,8,0	1/1:12,0:11:23.85:206,24,0	./.	0/0:14,1:23:15.02:0,15,173	0/1:10,10:18:99:242,0,131	0/0:7,3:9:3.01:0,3,41	0/1:6,18:23:51.53:395,0,52	0/1:9,2:10:69.99:94,0,70	1/1:7,0:4:11.44:90,11,0	0/1:15,2:15:62.90:63,0,250	0/0:18,0:11:24.03:0,24,273	0/0:33,0:32:81.22:0,81,1068	0/0:16,0:15:32.55:0,33,452	0/0:20,2:19:24.04:0,24,305	0/1:12,9:17:99:189,0,174	0/1:17,11:20:99:287,0,119	1/1:9,0:7:2.94:18,3,0	0/0:24,0:24:69.21:0,69,929	0/0:27,0:26:75.23:0,75,1003	0/0:17,0:17:45.09:0,45,553
chr10	88223434	.	CTCTG	C	1012.02	PASS	AB=0.980;AC=18;AF=0.346;AN=52;BaseQRankSum=3.725;DP=539;FS=0.576;HRun=0;HaplotypeScore=157.4661;InbreedingCoeff=0.0696;MQ=44.25;MQ0=25;MQRankSum=-2.063;QD=4.00;ReadPosRankSum=1.863;VQSLOD=2.3917;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,1:19:10.99:76,11,0	0/0:3,0:3:1.25:0,1,3	./.	0/0:26,0:6:5.48:0,5,69	0/1:25,0:23:55.51:56,0,135	0/1:24,2:23:18.66:19,0,556	0/1:17,0:14:27.01:27,0,272	0/0:45,0:38:99:0,111,2063	0/1:9,0:9:12.90:69,0,13	1/1:11,1:11:25.39:247,25,0	./.	0/0:23,0:22:15.05:0,15,388	0/1:19,0:17:79.72:80,0,313	0/0:11,0:10:5.89:0,6,120	0/1:26,0:25:99:144,0,152	0/1:10,0:9:14.50:15,0,165	1/1:6,0:3:8.50:76,9,0	0/1:17,0:15:8.61:9,0,716	0/0:18,0:11:24.07:0,24,454	0/0:33,0:32:81.26:0,81,1839	0/0:16,0:15:32.55:0,33,883	0/0:21,0:18:30.04:0,30,689	0/1:21,0:17:88.15:88,0,390	0/1:24,4:20:99:254,0,293	1/1:9,0:7:2.96:19,3,0	0/0:25,0:25:75.23:0,75,1579	0/0:27,0:27:78.24:0,78,1699	0/0:17,0:17:48.12:0,48,1061
chr10	88223436	.	CTG	C	653.98	PASS	AB=0.965;AC=15;AF=0.288;AN=52;BaseQRankSum=5.760;DP=537;FS=0.677;HRun=0;HaplotypeScore=148.5860;InbreedingCoeff=0.4102;MQ=44.56;MQ0=24;MQRankSum=-4.757;QD=4.27;ReadPosRankSum=-0.300;VQSLOD=3.0187;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,11:19:11.52:130,12,0	1/1:2,1:3:2.74:12,3,0	./.	0/0:29,0:7:3.45:0,3,88	0/0:22,0:21:21.31:0,21,200	0/1:24,2:23:52.80:53,0,405	0/1:15,2:14:72.24:72,0,203	0/0:46,0:39:99:0,114,2013	0/1:9,0:9:2.87:3,0,19	1/1:3,8:10:29.98:374,30,0	./.	0/0:22,0:21:15.05:0,15,285	0/0:22,0:20:33.89:0,34,341	0/0:10,1:10:6.01:0,6,83	0/0:26,0:25:15.48:0,15,227	0/0:10,0:9:13.81:0,14,161	1/1:2,3:3:8.90:100,9,0	0/1:18,0:16:22.09:22,0,577	0/0:14,0:9:24.08:0,24,432	0/0:32,0:32:81.26:0,81,1483	0/0:16,0:15:33.09:0,33,637	0/0:21,0:17:30.04:0,30,558	0/0:22,0:18:30.04:0,30,346	0/1:27,0:19:34.66:35,0,209	1/1:3,6:7:2.88:15,3,0	0/0:25,0:25:75.19:0,75,1330	0/0:27,0:27:78.21:0,78,1372	0/0:17,0:17:48.10:0,48,801
chr10	88223438	.	G	GTC	130.05	PASS	AB=0.944;AC=11;AF=0.204;AN=54;BaseQRankSum=5.929;DP=544;FS=4.868;HRun=0;HaplotypeScore=151.2492;InbreedingCoeff=-0.0590;MQ=44.89;MQ0=20;MQRankSum=1.203;QD=0.70;ReadPosRankSum=-0.727;VQSLOD=2.5189;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:20:5.81:0,6,32	0/0:3,0:3:2.84:0,3,14	0/0:9,0:1:2.98:0,3,22	0/0:27,0:7:4.52:0,5,79	0/1:24,0:23:6.23:6,0,69	0/1:20,6:23:36.49:36,0,294	0/1:13,5:15:92.44:92,0,143	0/0:44,0:38:99:0,108,1425	1/1:9,0:9:4.84:13,5,0	0/1:11,0:10:23.11:23,0,43	./.	0/0:21,1:21:15.05:0,15,206	0/1:21,0:19:13.19:13,0,176	0/0:8,3:10:6.02:0,6,82	0/1:26,0:25:27.10:27,0,63	0/0:10,0:9:2.64:0,3,77	0/1:6,0:4:1.29:25,0,1	0/1:16,2:16:8.07:8,0,383	0/0:16,0:10:24.07:0,24,315	0/0:34,0:34:78.21:0,78,1012	0/0:18,0:17:33.10:0,33,453	0/0:19,2:17:30.10:0,30,404	0/0:21,0:18:0.82:0,1,182	0/1:26,0:19:19.29:19,0,150	0/0:10,0:8:0.47:0,0,1	0/0:25,0:25:66.22:0,66,901	0/0:27,0:27:69.22:0,69,931	0/0:18,0:18:42.12:0,42,556
chr10	88223456	.	G	GTCTC	1147.58	PASS	AB=1.000;AC=19;AF=0.365;AN=52;BaseQRankSum=-1.733;DP=584;FS=2.389;HRun=0;HaplotypeScore=177.2646;InbreedingCoeff=0.4999;MQ=53.75;MQ0=15;MQRankSum=-0.037;QD=4.47;ReadPosRankSum=-0.692;VQSLOD=2.7997;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:23:14.53:0,15,109	1/1:3,0:3:0.47:1,0,0	0/0:34,0:8:2.06:0,2,76	0/1:57,0:19:9.76:10,0,54	1/1:12,12:25:8.75:111,9,0	0/0:25,0:24:5.06:0,5,250	0/1:23,0:20:1.22:1,0,162	0/0:36,0:33:17.37:0,17,126	./.	0/0:13,0:12:24.91:0,25,220	./.	0/0:20,0:19:20.94:0,21,185	1/1:10,11:21:17.73:327,18,0	0/0:11,0:11:8.96:0,9,74	1/1:17,9:26:6.02:149,6,0	1/1:2,11:15:6.23:88,6,0	0/1:6,0:5:5.30:5,0,41	0/1:19,0:17:3.90:4,0,308	0/0:12,0:9:18.03:0,18,261	0/0:30,0:30:60.20:0,60,963	0/0:23,0:23:43.80:0,44,344	0/1:21,0:20:6.43:6,0,311	1/1:7,8:18:13.76:248,14,0	1/1:14,6:17:18.21:361,18,0	0/0:11,0:9:2.22:0,2,7	0/0:22,0:22:41.49:0,41,368	0/0:20,0:20:54.18:0,54,904	0/0:17,0:17:39.01:0,39,430
chr10	88223471	.	TC	T	94.97	PASS	AB=0.883;AC=7;AF=0.125;AN=56;BaseQRankSum=4.300;DP=560;FS=4.139;HRun=2;HaplotypeScore=153.9909;InbreedingCoeff=0.4580;MQ=63.20;MQ0=12;MQRankSum=0.649;QD=1.27;ReadPosRankSum=1.909;VQSLOD=-0.4534;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,3:22:16.33:0,16,231	0/1:2,1:3:32.88:33,0,34	0/0:52,0:22:46.68:0,47,624	0/0:72,0:27:55.57:0,56,605	0/0:22,1:23:12.21:0,12,231	0/0:22,3:24:41.98:0,42,541	0/0:20,1:18:32.76:0,33,458	0/0:21,0:19:10.05:0,10,93	0/0:8,0:8:10.65:0,11,101	0/0:13,0:13:35.36:0,35,293	0/0:11,1:12:8.98:0,9,86	0/0:17,1:17:30.01:0,30,381	0/1:16,2:17:12.68:13,0,116	0/0:10,1:11:15.04:0,15,197	0/0:18,1:19:11.80:0,12,120	0/0:15,0:15:11.50:0,12,87	0/0:9,1:9:23.12:0,23,223	0/0:18,1:17:41.54:0,42,587	0/0:7,0:7:21.07:0,21,304	0/0:27,0:27:75.19:0,75,1084	1/1:20,0:20:22.45:77,22,0	0/0:20,1:20:44.66:0,45,660	0/0:16,1:17:25.39:0,25,186	0/0:18,0:16:30.61:0,31,242	0/0:10,2:10:14.92:0,15,131	0/1:15,0:15:27.99:28,0,50	0/0:19,0:19:57.19:0,57,849	1/1:19,0:19:25.88:85,26,0
chr10	88223472	.	C	CT	270.68	PASS	AB=0.929;AC=10;AF=0.179;AN=56;BaseQRankSum=5.569;DP=551;FS=3.128;HRun=1;HaplotypeScore=148.2559;InbreedingCoeff=0.2421;MQ=65.53;MQ0=12;MQRankSum=-0.591;QD=2.17;ReadPosRankSum=2.834;VQSLOD=-0.2965;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:21:16.55:0,17,268	0/1:3,0:3:15.11:15,0,34	0/0:53,0:23:59.49:0,59,652	0/0:73,0:28:50.10:0,50,566	0/0:21,0:21:0.71:0,1,248	0/0:23,1:23:41.94:0,42,497	0/0:17,0:15:32.61:0,33,414	0/0:23,0:21:5.04:0,5,71	0/0:7,1:8:5.07:0,5,98	0/0:13,0:13:28:0,28,337	0/0:11,0:11:8.98:0,9,87	0/0:17,0:16:30.01:0,30,360	0/1:15,2:16:23.89:54,0,24	0/0:9,0:9:15.04:0,15,191	0/1:13,5:18:2.94:3,0,70	0/1:15,0:15:0.60:1,0,54	0/0:10,0:9:23.95:0,24,250	0/0:19,0:17:45.12:0,45,601	0/0:7,0:7:21.07:0,21,290	0/0:27,0:27:75.25:0,75,1030	1/1:20,0:20:28.84:120,29,0	0/0:21,0:20:45.15:0,45,620	0/1:15,2:17:13.94:14,0,65	0/0:18,0:17:6.21:0,6,160	0/0:12,0:10:14.92:0,15,140	0/1:16,0:16:20.48:79,0,20	0/0:19,0:19:57.19:0,57,794	1/1:19,0:19:35.88:128,36,0
chr10	88223590	.	C	CT	1655.99	PASS	AB=0.882;AC=46;AF=0.821;AN=56;BaseQRankSum=2.131;DP=517;FS=0.000;HRun=16;HaplotypeScore=89.3032;InbreedingCoeff=0.2632;MQ=66.53;MQ0=3;MQRankSum=-1.489;QD=3.75;ReadPosRankSum=-2.746;VQSLOD=0.1295;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:33:13.73:0,14,40	1/1:8,0:8:7.49:31,7,0	0/1:17,1:12:12.50:29,0,13	0/0:21,0:15:2.18:0,2,16	1/1:28,0:26:12.06:55,12,0	0/1:5,8:13:21.54:36,0,22	1/1:7,19:28:16.91:140,17,0	1/1:9,7:17:26.67:149,27,0	1/1:13,0:13:3.31:16,3,0	1/1:19,0:19:7.31:26,7,0	1/1:18,0:18:28:161,28,0	1/1:11,9:20:8.91:64,9,0	1/1:12,0:12:7.22:38,7,0	1/1:2,2:9:5.92:39,6,0	1/1:15,0:14:14.80:90,15,0	1/1:11,0:10:8.46:49,8,0	1/1:22,0:22:7.93:27,8,0	1/1:10,1:11:19.71:137,20,0	0/0:21,0:21:3.32:0,3,110	0/1:23,1:24:28.91:59,0,29	1/1:12,1:13:17.28:85,17,0	1/1:7,9:16:9.40:68,9,0	1/1:28,0:25:20.36:102,20,0	1/1:18,0:15:17.74:99,18,0	1/1:12,0:12:19.65:115,20,0	1/1:11,0:24:27.62:137,28,0	0/1:22,0:22:33.84:34,0,35	1/1:3,2:21:4.09:17,4,0
chr10	88223957	.	AG	A	2541.85	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=4.601;DP=470;FS=129.301;HRun=1;HaplotypeScore=49.3847;InbreedingCoeff=-0.3789;MQ=36.19;MQ0=56;MQRankSum=-0.298;QD=5.93;ReadPosRankSum=-0.268;VQSLOD=0.5474;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:20:38.48:212,38,0	0/1:8,0:6:19.88:34,0,20	0/1:17,0:1:0:0,0,0	0/0:29,2:1:2.50:0,2,9	0/1:26,0:21:20.70:130,0,21	0/1:16,0:16:72.53:156,0,73	0/1:13,0:12:52.60:99,0,53	0/1:28,0:27:43.70:270,0,44	1/1:10,0:10:25.75:171,26,0	0/1:14,0:12:53.06:126,0,53	1/1:8,0:7:5.46:60,5,0	0/1:12,0:10:14.72:65,0,15	1/1:13,0:10:10.79:162,11,0	0/1:16,0:14:31.09:31,0,83	0/1:14,0:10:22.35:58,0,22	0/1:12,0:10:7.02:76,0,7	1/1:23,0:19:9.11:98,9,0	0/1:20,0:19:49.53:175,0,50	0/1:19,0:12:38.75:39,0,95	0/1:12,0:10:51.56:61,0,52	1/1:7,0:5:5.99:50,6,0	0/1:5,0:5:19.35:42,0,19	0/0:3,7:9:3.92:0,4,13	1/1:16,0:14:5.03:32,5,0	0/1:16,0:11:15.82:16,0,33	0/1:18,0:15:12.50:126,0,12	0/1:17,0:16:9.32:9,0,137	1/1:39,0:25:41.09:400,41,0
chr10	88224361	.	CT	C	5823.56	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-10.850;DP=388;FS=16.646;HRun=10;HaplotypeScore=76.6036;InbreedingCoeff=0.9283;MQ=75.26;MQ0=0;MQRankSum=-0.190;QD=21.10;ReadPosRankSum=2.868;VQSLOD=4.1656;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:56.98:495,57,0	1/1:0,7:7:21:182,21,0	0/0:9,0:9:14.76:0,15,125	0/0:10,0:10:21.01:0,21,206	1/1:3,20:23:53.97:469,54,0	0/0:19,0:19:40.49:0,40,231	0/0:16,0:16:29.03:0,29,159	1/1:3,11:14:32.98:286,33,0	1/1:1,9:10:20.98:182,21,0	1/1:1,17:18:50.99:443,51,0	1/1:4,13:17:32.97:286,33,0	0/0:10,0:10:22.14:0,22,125	1/1:0,8:8:24:208,24,0	0/0:13,0:13:34.94:0,35,208	1/1:0,5:5:15:130,15,0	1/1:0,8:8:20.99:182,21,0	1/1:1,28:30:83.02:709,83,0	0/0:19,0:19:43.59:0,44,242	1/1:2,9:11:26.99:234,27,0	1/1:1,21:22:53.96:469,54,0	1/1:2,6:8:17.99:156,18,0	0/0:14,1:15:4.22:0,4,111	1/1:1,14:15:32.99:286,33,0	1/1:0,1:1:3:26,3,0	1/1:3,16:19:17.80:384,18,0	1/1:0,9:9:20.98:182,21,0	1/1:2,18:20:20.77:410,21,0	1/1:4,4:8:11.99:104,12,0
chr10	88224369	.	T	TTTC	3976.44	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=-10.266;DP=386;FS=12.416;HRun=0;HaplotypeScore=96.0916;InbreedingCoeff=0.9687;MQ=75.94;MQ0=0;MQRankSum=0.725;QD=44.68;ReadPosRankSum=-0.088;VQSLOD=4.3934;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:59.95:0,60,512	0/0:7,0:7:18:0,18,156	0/0:10,0:9:18.47:0,18,194	0/0:11,0:11:9.54:0,10,193	0/0:23,0:23:56.90:0,57,480	1/1:2,13:16:36.11:698,36,0	1/1:2,12:14:30.10:611,30,0	0/0:15,0:15:32.98:0,33,293	0/0:10,0:10:23.97:0,24,202	0/0:19,0:19:50.98:0,51,446	0/0:14,0:14:35.95:0,36,304	1/1:2,10:13:24.08:455,24,0	0/0:8,0:8:23.97:0,24,203	1/1:1,13:14:33.11:671,33,0	0/0:6,0:6:17.96:0,18,150	0/0:10,0:10:29.89:0,30,241	0/0:30,0:30:83.96:0,84,721	1/1:1,16:17:45.15:913,45,0	0/0:10,0:10:23.98:0,24,208	0/0:24,0:24:59.95:0,60,513	0/0:6,0:6:18:0,18,156	1/1:2,13:15:13.06:629,13,0	0/0:15,0:15:35.92:0,36,299	./.	0/0:20,0:20:59.91:0,60,529	0/0:10,0:10:20.94:0,21,173	0/0:22,0:22:65.88:0,66,566	0/0:4,0:4:12:0,12,104
chr10	88225750	.	A	ACACACACACACACACACACG	42766.86	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=0.666;DP=761;FS=3.070;HRun=0;HaplotypeScore=366.4443;InbreedingCoeff=0.6023;MQ=55.30;MQ0=5;MQRankSum=-9.683;QD=67.67;ReadPosRankSum=1.929;VQSLOD=3.3882;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:84.73:0,85,3971	1/1:16,2:24:18.06:1559,18,0	0/0:35,0:24:35.76:0,36,1052	0/0:37,0:28:29.21:0,29,889	1/1:20,10:43:27.09:2422,27,0	1/1:24,0:24:20.82:523,21,0	1/1:27,0:25:3.01:53,3,0	1/1:42,0:39:78.27:2429,78,0	1/1:7,7:22:24.08:1954,24,0	1/1:24,4:38:87.12:4709,87,0	1/1:18,6:29:12.04:1108,12,0	1/1:20,0:20:5.14:1223,5,0	1/1:18,5:24:42.09:2808,42,0	0/1:22,0:22:28.30:992,0,28	1/1:10,5:25:9.03:839,9,0	1/1:10,6:27:30.10:2311,30,0	1/1:6,2:19:15.05:817,15,0	1/1:12,0:12:33.11:2333,33,0	1/1:14,5:30:69.10:3250,69,0	1/1:14,5:22:14.58:1339,15,0	0/1:30,0:28:20.70:582,0,21	1/1:22,0:22:6.02:260,6,0	1/1:11,0:18:2.46:203,2,0	1/1:10,3:22:5.64:521,6,0	0/0:19,0:19:42.14:0,42,2041	1/1:20,6:37:90.24:5542,90,0	1/1:25,4:37:54.58:3864,55,0	1/1:8,4:15:10.99:1124,11,0
chr10	88226385	.	T	TC	9856.04	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=11.684;DP=482;FS=9.620;HRun=7;HaplotypeScore=70.6876;InbreedingCoeff=0.9724;MQ=90.72;MQ0=0;MQRankSum=-2.519;QD=28.65;ReadPosRankSum=2.797;VQSLOD=5.2940;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:87.27:1051,87,0	1/1:0,6:6:15.05:181,15,0	0/0:23,0:23:45.04:0,45,429	0/0:16,0:16:23.91:0,24,255	1/1:2,11:13:21.06:254,21,0	0/0:15,0:15:45.07:0,45,435	0/0:17,0:17:51.04:0,51,484	1/1:7,15:23:51.12:598,51,0	1/1:2,19:21:54.17:652,54,0	1/1:1,16:17:48.15:580,48,0	1/1:2,8:10:24.07:290,24,0	0/0:22,0:22:63.04:0,63,593	1/1:4,20:24:48.11:563,48,0	0/0:22,0:22:57.08:0,57,550	1/1:2,13:15:33.10:399,33,0	1/1:1,12:13:36.11:435,36,0	1/1:2,25:27:72.22:870,72,0	0/0:16,0:16:45.03:0,45,426	1/1:2,15:17:45.61:544,46,0	1/1:0,9:9:24.07:290,24,0	1/1:1,15:16:33.10:398,33,0	0/0:7,0:7:21.03:0,21,202	1/1:0,6:6:12.04:145,12,0	1/1:1,23:24:63.19:758,63,0	1/1:3,14:17:33.10:399,33,0	1/1:4,18:22:51.16:616,51,0	1/1:1,23:23:63.19:761,63,0	1/1:5,2:7:6.02:73,6,0
chr10	88227042	.	GT	G	10618.01	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.203;DP=483;FS=14.728;HRun=8;HaplotypeScore=65.9849;InbreedingCoeff=0.9814;MQ=68.87;MQ0=0;MQRankSum=-5.822;QD=23.03;ReadPosRankSum=3.178;VQSLOD=4.2437;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:66.10:637,66,0	1/1:0,10:10:27.04:261,27,0	0/0:13,0:12:17.07:0,17,170	0/0:9,0:7:18.05:0,18,213	1/1:1,22:23:63.09:605,63,0	1/1:1,12:13:27.04:261,27,0	1/1:0,15:15:36.06:348,36,0	1/1:4,26:30:75.10:720,75,0	1/1:1,13:14:33:308,33,0	1/1:5,23:27:69.06:647,69,0	1/1:0,14:14:42.01:394,42,0	1/1:3,11:14:18.03:174,18,0	1/1:1,17:18:30.04:290,30,0	1/1:1,15:16:42.07:405,42,0	1/1:2,15:17:36.05:347,36,0	1/1:3,13:16:27.04:261,27,0	1/1:2,20:22:45.07:435,45,0	1/1:0,23:23:51.08:491,51,0	1/1:3,21:24:63.04:590,63,0	1/1:3,17:20:48.07:462,48,0	1/1:0,7:7:21.03:203,21,0	1/1:0,11:11:33.05:319,33,0	1/1:0,12:12:30.05:290,30,0	1/1:0,13:13:36.06:348,36,0	1/1:1,14:15:30.05:290,30,0	1/1:2,26:28:78:724,78,0	1/1:0,15:15:42.07:405,42,0	1/1:0,17:17:42.07:406,42,0
chr10	88227988	.	TA	T	1657.52	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-3.388;DP=476;FS=1.148;HRun=4;HaplotypeScore=94.0697;InbreedingCoeff=0.7545;MQ=57.71;MQ0=7;MQRankSum=-0.013;QD=23.68;ReadPosRankSum=2.689;VQSLOD=2.3825;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:37:81.22:953,81,0	0/0:4,0:4:12.01:0,12,125	0/0:8,0:8:21.02:0,21,215	0/1:9,0:5:9.72:10,0,19	0/0:28,0:28:81.21:0,81,988	0/0:17,0:15:42.12:0,42,543	0/0:10,0:10:26.97:0,27,287	0/0:32,0:32:90.15:0,90,1083	0/0:20,0:20:57.14:0,57,672	0/0:18,0:18:47.93:0,48,565	0/0:21,0:21:57.64:0,58,704	0/0:22,0:21:54.10:0,54,632	0/0:16,0:15:39.12:0,39,495	0/0:10,0:10:24.08:0,24,319	0/0:12,0:12:33.11:0,33,425	0/0:17,0:16:48.11:0,48,565	0/0:25,0:25:60.17:0,60,751	0/0:17,0:17:48.07:0,48,556	0/0:22,0:21:52.71:0,53,639	0/0:28,0:28:84.17:0,84,982	0/0:5,0:5:15.01:0,15,167	0/0:5,0:5:12.01:0,12,130	0/0:7,0:7:21.03:0,21,240	0/0:5,0:5:12.04:0,12,155	1/1:1,23:24:69.21:822,69,0	0/0:25,0:23:66.20:0,66,845	0/0:26,0:25:69.63:0,70,822	0/0:5,0:5:15.05:0,15,200
chr10	88229059	.	GCA	G	817.21	PASS	AB=0.975;AC=13;AF=0.241;AN=54;BaseQRankSum=2.216;DP=704;FS=2.745;HRun=0;HaplotypeScore=181.4611;InbreedingCoeff=0.4622;MQ=65.55;MQ0=6;MQRankSum=1.618;QD=3.95;ReadPosRankSum=3.159;VQSLOD=2.9288;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:28.37:0,28,476	0/0:9,0:10:0.30:0,0,21	0/0:54,0:30:60.20:0,60,986	0/1:47,2:27:47.13:47,0,692	0/0:17,1:18:1.19:0,1,18	0/0:29,0:29:63.14:0,63,470	0/0:31,0:31:60.73:0,61,460	0/0:39,0:38:84.05:0,84,1203	0/0:26,0:26:2.80:0,3,6	0/1:25,1:26:99:370,0,112	0/0:13,0:13:1.82:0,2,5	0/0:36,0:36:67.77:0,68,541	0/1:25,0:26:12.32:12,0,27	0/0:29,0:29:63.44:0,63,381	0/0:23,1:24:8.22:0,8,19	0/0:25,0:26:3.78:0,4,30	1/1:28,1:30:6.01:60,6,0	0/0:21,0:21:46.38:0,46,234	1/1:18,0:17:28.96:269,29,0	1/1:11,0:11:3.83:14,4,0	0/0:37,0:37:46.22:0,46,699	0/0:14,0:14:31.66:0,32,205	./.	1/1:25,2:27:3.17:71,3,0	0/0:16,0:16:25.97:0,26,230	0/0:21,0:21:53.24:0,53,846	1/1:19,1:20:17.31:130,17,0	0/0:10,0:10:18.96:0,19,210
chr10	88229060	.	C	CACACACACAT	4676.61	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=2.436;DP=714;FS=0.426;HRun=0;HaplotypeScore=256.6183;InbreedingCoeff=0.2531;MQ=65.44;MQ0=6;MQRankSum=-5.815;QD=10.68;ReadPosRankSum=-2.308;VQSLOD=2.5947;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:86.14:86,0,409	0/1:11,0:11:32.07:179,0,32	0/0:54,0:30:60.20:0,60,1212	0/0:51,0:27:13.13:0,13,925	1/1:18,0:18:3.08:37,3,0	0/0:29,0:29:66.22:0,66,1612	0/0:30,0:30:62.97:0,63,1370	0/1:37,0:36:72.47:72,0,1002	1/1:27,0:27:6.02:130,6,0	1/1:11,14:26:42.43:1093,42,0	1/1:13,0:13:2.70:63,3,0	0/0:38,0:38:80.74:0,81,1609	1/1:26,0:26:23.97:372,24,0	0/0:28,0:28:69.23:0,69,1882	1/1:25,0:25:18.06:391,18,0	1/1:27,0:27:26.87:501,27,0	0/1:30,0:30:47.70:204,0,48	0/0:21,0:21:54.16:0,54,1561	1/1:19,0:18:31.98:345,32,0	1/1:12,0:12:12.04:173,12,0	0/1:37,0:37:49.90:50,0,677	0/0:14,0:14:33.09:0,33,837	0/0:11,0:11:0:0,0,0	1/1:27,0:27:9.03:138,9,0	0/1:16,0:16:31.54:32,0,148	0/1:21,0:21:99:580,0,583	0/1:21,0:21:21.81:197,0,22	0/1:10,0:10:34.91:35,0,180
chr10	88229062	.	C	CACACACAT	5589.92	PASS	AB=0.976;AC=32;AF=0.571;AN=56;BaseQRankSum=1.641;DP=731;FS=0.000;HRun=0;HaplotypeScore=236.1720;InbreedingCoeff=0.3309;MQ=62.89;MQ0=7;MQRankSum=-5.866;QD=12.02;ReadPosRankSum=-1.713;VQSLOD=3.5473;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:99:135,0,431	0/1:10,2:12:17.89:246,0,18	0/0:52,0:27:60.20:0,60,1274	0/0:52,0:28:12.32:0,12,998	1/1:18,0:18:3.14:49,3,0	0/0:28,0:28:66.22:0,66,1509	0/0:31,0:31:63.17:0,63,1291	0/1:39,0:38:99:104,0,1097	1/1:28,0:28:4.47:151,4,0	1/1:26,0:26:46.20:1192,46,0	1/1:4,10:17:2.95:75,3,0	0/0:39,0:39:81.09:0,81,1647	1/1:25,0:25:9.15:397,9,0	0/0:28,0:28:69.23:0,69,1667	1/1:26,0:26:18.06:459,18,0	1/1:26,1:27:27.39:616,27,0	1/1:9,21:33:14.91:336,15,0	0/0:21,0:21:54.16:0,54,1397	1/1:19,0:18:34.68:417,35,0	1/1:11,0:11:12.03:221,12,0	0/1:37,0:37:78.52:79,0,715	0/0:15,0:15:33.09:0,33,788	1/1:12,0:12:0.45:1,0,0	1/1:30,0:30:9.03:149,9,0	0/1:17,0:17:56.06:56,0,143	0/1:20,1:21:99:503,0,605	0/1:20,0:20:3.51:276,0,4	0/1:11,0:11:99:130,0,200
chr10	88229064	.	C	CACACAT	5527.78	PASS	AB=0.985;AC=31;AF=0.554;AN=56;BaseQRankSum=2.959;DP=749;FS=2.476;HRun=0;HaplotypeScore=221.0306;InbreedingCoeff=0.5289;MQ=60.33;MQ0=7;MQRankSum=-6.035;QD=13.72;ReadPosRankSum=0.690;VQSLOD=4.3832;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:77.55:78,0,448	0/1:11,1:12:45.44:210,0,45	0/0:51,0:26:60.20:0,60,1184	0/0:53,0:28:16.70:0,17,997	1/1:15,4:19:3.14:60,3,0	0/0:29,0:29:66.22:0,66,1357	0/0:29,0:29:63.04:0,63,1183	0/0:39,0:38:10.18:0,10,1188	1/1:5,20:32:6.85:210,7,0	1/1:24,1:25:42.62:854,43,0	1/1:16,1:17:2.95:104,3,0	0/0:37,0:37:80.98:0,81,1556	1/1:6,20:28:20.06:554,20,0	0/0:29,0:29:69.23:0,69,1472	1/1:4,22:30:18.06:626,18,0	1/1:7,19:30:27.08:741,27,0	1/1:32,0:31:20.89:454,21,0	0/0:23,0:23:20.21:0,20,1174	1/1:17,0:16:32.68:436,33,0	1/1:11,1:12:12.04:283,12,0	0/0:40,0:40:26.25:0,26,749	0/0:14,0:14:33.09:0,33,683	1/1:5,8:14:1.25:3,1,0	1/1:6,21:32:9.03:179,9,0	0/1:17,0:17:41.46:41,0,142	0/1:21,0:21:99:246,0,621	1/1:21,0:21:10.54:367,11,0	0/1:11,0:11:82.74:83,0,211
chr10	88229066	.	C	CACAT	4077.56	PASS	AB=0.964;AC=27;AF=0.482;AN=56;BaseQRankSum=4.041;DP=742;FS=0.000;HRun=0;HaplotypeScore=201.1306;InbreedingCoeff=0.4024;MQ=58.59;MQ0=7;MQRankSum=-4.848;QD=11.20;ReadPosRankSum=2.581;VQSLOD=3.1623;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:8.10:0,8,425	0/1:8,3:12:39.40:159,0,39	0/0:52,0:24:60.20:0,60,1067	0/0:55,0:28:22.21:0,22,868	1/1:7,12:20:3.45:82,3,0	0/0:28,0:28:66.22:0,66,1202	0/0:28,0:28:62.90:0,63,1055	0/0:40,0:39:93.86:0,94,1274	0/1:33,0:33:56.81:101,0,57	0/1:24,0:24:94.84:411,0,95	0/1:16,0:16:16.88:55,0,17	0/0:38,0:38:80.93:0,81,1382	1/1:26,2:28:6.25:377,6,0	0/0:29,0:29:69.24:0,69,1291	1/1:27,0:27:20.62:358,21,0	1/1:28,2:30:5.81:518,6,0	1/1:29,0:28:20.15:316,20,0	0/0:23,0:23:53.45:0,53,1004	1/1:8,9:16:35.93:583,36,0	1/1:1,11:13:12.04:300,12,0	0/0:40,0:40:45.25:0,45,744	0/0:12,0:12:33.09:0,33,582	1/1:13,1:14:3:25,3,0	1/1:30,0:30:9.03:132,9,0	0/1:18,0:18:13.57:14,0,126	0/1:20,0:20:65.91:66,0,611	1/1:5,15:22:21.66:512,22,0	0/1:11,0:11:68.99:69,0,188
chr10	88229068	.	C	CAT	1920.12	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=7.334;DP=745;FS=0.920;HRun=0;HaplotypeScore=185.2923;InbreedingCoeff=0.2429;MQ=55.09;MQ0=7;MQRankSum=-4.798;QD=5.80;ReadPosRankSum=3.240;VQSLOD=3.1578;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:7.66:0,8,384	0/1:12,0:12:31.47:66,0,31	0/0:49,0:21:60.20:0,60,901	0/0:56,0:28:29.37:0,29,770	0/1:21,0:21:14.48:36,0,14	0/0:29,0:29:66.22:0,66,1002	0/0:29,0:29:63.04:0,63,887	0/0:37,0:36:99:0,105,1259	0/1:33,0:33:48.76:49,0,57	0/1:25,0:25:99:279,0,176	0/1:15,0:15:16.18:35,0,16	0/0:39,0:39:81.27:0,81,1196	0/1:28,0:28:26.19:142,0,26	0/0:29,0:29:69.23:0,69,1050	1/1:29,0:29:19:194,19,0	1/1:30,1:31:10:302,10,0	0/1:28,0:27:8.02:79,0,8	0/0:24,0:24:54.16:0,54,796	1/1:15,3:17:1.78:324,2,0	1/1:11,0:12:11.97:134,12,0	0/0:40,0:40:51.13:0,51,698	0/0:13,0:13:33.09:0,33,477	0/0:14,0:14:2.94:0,3,20	1/1:29,0:29:9.03:107,9,0	0/1:17,0:17:22:22,0,122	0/0:20,0:20:27.25:0,27,606	1/1:19,2:22:28.91:318,29,0	0/1:11,0:11:17.07:17,0,163
chr10	88229072	.	TAC	T	2649.25	PASS	AB=0.804;AC=12;AF=0.214;AN=56;BaseQRankSum=-3.939;DP=762;FS=0.000;HRun=0;HaplotypeScore=185.2872;InbreedingCoeff=0.7344;MQ=52.39;MQ0=9;MQRankSum=8.162;QD=15.31;ReadPosRankSum=4.775;VQSLOD=3.1318;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:36:2.16:0,2,47	0/0:13,0:13:16.97:0,17,132	0/0:49,0:19:21:0,21,247	0/0:56,0:27:33.51:0,34,346	0/0:25,0:25:11:0,11,70	1/1:10,18:29:38.95:443,39,0	0/1:10,15:28:11.81:335,0,12	0/0:40,0:39:26.80:0,27,230	0/0:32,0:32:5.60:0,6,49	0/0:23,0:23:29.44:0,29,250	0/0:14,0:14:5.74:0,6,37	1/1:9,26:37:50.57:563,51,0	0/0:28,0:28:27.43:0,27,201	1/1:6,22:28:54.16:643,54,0	0/0:29,0:29:13.49:0,13,183	0/0:30,0:30:31.72:0,32,246	0/0:26,0:25:0.82:0,1,2	1/1:2,21:24:37.98:578,38,0	0/0:21,0:18:19.50:0,19,162	0/0:12,0:12:13.75:0,14,104	0/0:39,0:39:22.16:0,22,149	1/1:3,8:12:23.90:258,24,0	0/1:15,0:15:0:0,0,0	0/0:26,0:26:8.27:0,8,46	0/0:4,0:24:16.80:0,17,97	0/0:11,0:30:46.09:0,46,299	0/0:22,0:22:27.49:0,27,216	0/0:10,0:13:15.84:0,16,99
chr10	88229272	.	G	GT	3446.66	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.148;DP=628;FS=9.249;HRun=7;HaplotypeScore=61.9979;InbreedingCoeff=0.9517;MQ=79.58;MQ0=0;MQRankSum=-1.024;QD=28.72;ReadPosRankSum=1.654;VQSLOD=4.1113;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,1141	0/0:17,0:17:48.07:0,48,464	0/0:27,0:27:45.31:0,45,532	0/0:19,0:19:29.80:0,30,384	0/0:25,0:25:75.11:0,75,720	1/1:2,21:23:54.17:652,54,0	1/1:1,20:21:45.14:544,45,0	0/0:31,0:31:69.09:0,69,661	0/0:22,0:22:63.06:0,63,599	0/0:33,0:31:87.13:0,87,839	0/0:25,0:25:69.09:0,69,660	1/1:1,20:21:51.16:616,51,0	0/0:17,0:17:48.08:0,48,463	1/1:0,14:14:39.12:471,39,0	0/0:20,0:20:51.08:0,51,492	0/0:14,0:14:42.07:0,42,405	0/0:26,0:26:75.07:0,75,710	1/1:1,13:14:1.11:297,1,0	0/0:21,0:21:60.08:0,60,570	0/0:28,0:28:81.11:0,81,777	0/0:8,0:8:24.04:0,24,231	1/1:1,26:27:72.22:867,72,0	0/0:25,0:25:66.10:0,66,637	0/0:17,0:17:42.05:0,42,406	0/0:40,0:40:99:0,114,1097	0/0:27,0:27:75.12:0,75,724	0/0:11,0:11:33.05:0,33,319	0/0:12,0:12:30.05:0,30,290
chr10	88230011	.	CAT	C	6469.01	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-2.638;DP=628;FS=4.934;HRun=0;HaplotypeScore=138.9280;InbreedingCoeff=0.9048;MQ=83.80;MQ0=0;MQRankSum=-2.335;QD=21.28;ReadPosRankSum=3.543;VQSLOD=4.8210;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1325	1/1:13,0:13:38.96:332,39,0	0/0:18,0:17:50.66:0,51,849	0/0:24,0:24:61.59:0,62,1016	1/1:23,1:24:62.40:603,62,0	0/0:24,0:24:66.19:0,66,802	0/0:26,0:26:66.19:0,66,769	0/0:19,0:19:19.09:0,19,94	1/1:24,0:24:63.02:605,63,0	1/1:25,2:27:68.63:608,69,0	1/1:22,0:22:59.86:519,60,0	0/0:29,0:29:74.95:0,75,847	1/1:18,0:18:45.02:437,45,0	0/0:20,0:20:57.14:0,57,637	1/1:14,1:15:17.02:343,17,0	1/1:9,0:9:24:216,24,0	1/1:26,0:26:62.97:555,63,0	0/0:25,0:25:49.42:0,49,782	1/1:12,0:12:2.38:155,2,0	1/1:20,1:21:57.86:514,58,0	0/0:18,0:18:9.07:0,9,34	0/0:24,0:24:63.08:0,63,735	1/1:30,2:32:86.70:815,87,0	1/1:27,0:27:31.02:442,31,0	0/0:29,0:29:84.26:0,84,1014	0/1:21,0:21:5.14:5,0,14	1/1:13,0:13:35.98:319,36,0	0/0:28,0:28:10.69:0,11,31
chr10	88230012	.	ATC	A	12194.68	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-4.874;DP=624;FS=5.208;HRun=0;HaplotypeScore=116.9174;InbreedingCoeff=0.9987;MQ=82.84;MQ0=0;MQRankSum=-2.838;QD=33.59;ReadPosRankSum=1.681;VQSLOD=6.9345;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:40:99:0,114,717	1/1:0,13:13:39.13:631,39,0	0/0:17,0:16:47.63:0,48,765	0/0:23,0:23:58.47:0,58,921	1/1:1,23:24:66.04:1011,66,0	0/0:25,0:25:65.04:0,65,425	0/0:27,0:27:64.99:0,65,417	1/1:0,0:19:33.38:136,33,0	1/1:0,24:24:63.22:1020,63,0	1/1:2,24:25:78.17:1173,78,0	1/1:0,22:22:60.14:941,60,0	0/0:30,0:30:74.32:0,74,473	1/1:0,18:18:45.15:722,45,0	0/0:20,0:20:56.06:0,56,354	1/1:1,13:14:39.13:632,39,0	1/1:0,9:9:24.08:389,24,0	1/1:0,25:25:63.22:1019,63,0	0/0:24,1:25:22.31:0,22,394	1/1:0,11:11:33.08:476,33,0	1/1:1,20:21:60.16:937,60,0	1/1:0,0:18:23.75:69,24,0	0/0:24,0:24:61.62:0,62,389	1/1:2,30:32:87.30:1402,87,0	1/1:0,26:26:51.14:826,51,0	0/0:30,0:30:82.78:0,83,533	1/1:0,0:20:38.85:142,39,0	1/1:0,13:13:36.12:584,36,0	1/1:0,0:28:29.56:86,30,0
chr10	88230013	.	TC	T	7920.07	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.537;DP=625;FS=12.605;HRun=8;HaplotypeScore=121.0776;InbreedingCoeff=0.9034;MQ=82.84;MQ0=0;MQRankSum=-7.892;QD=13.52;ReadPosRankSum=5.993;VQSLOD=3.1459;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,36:39:99:1042,108,0	1/1:13,0:13:28.86:90,29,0	0/0:16,0:16:11.03:0,11,399	0/0:22,0:23:26.84:0,27,435	1/1:24,0:24:32.20:123,32,0	1/1:3,22:25:57.09:550,57,0	1/1:1,26:27:63.10:608,63,0	1/1:20,0:20:11.94:167,12,0	1/1:24,0:24:46.62:145,47,0	1/1:26,0:25:50.40:157,50,0	1/1:23,0:23:42.18:131,42,0	1/1:2,28:30:72.12:695,72,0	1/1:18,0:18:33.12:103,33,0	1/1:2,18:20:54.09:521,54,0	1/1:15,0:15:6.55:67,7,0	1/1:9,0:9:17.76:55,18,0	1/1:25,0:25:46.44:145,46,0	1/1:3,21:24:62.32:586,62,0	1/1:11,0:11:16.48:51,16,0	1/1:21,0:21:40.84:127,41,0	1/1:19,0:19:17.43:207,17,0	1/1:1,23:24:60.10:579,60,0	1/1:32,0:32:64.01:199,64,0	1/1:26,0:26:37.74:118,38,0	1/1:1,29:30:81.13:782,81,0	1/1:20,0:20:49.12:269,49,0	1/1:13,0:13:26.64:83,27,0	1/1:28,0:28:52.67:318,53,0
chr10	88230785	.	G	GTTTTC	49108.37	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.789;DP=682;FS=0.000;HRun=0;HaplotypeScore=104.3972;InbreedingCoeff=0.9999;MQ=84.13;MQ0=0;MQRankSum=-11.170;QD=77.83;ReadPosRankSum=6.127;VQSLOD=6.0745;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:48,0:48:99:2867,123,0	1/1:1,12:13:33.11:1045,33,0	0/0:25,0:25:69.18:0,69,1374	0/0:26,0:26:66.15:0,66,1308	1/1:4,17:23:54.14:1512,54,0	1/1:7,13:22:57.16:1583,57,0	1/1:8,16:25:66.18:1854,66,0	1/1:12,15:29:87.27:2483,87,0	1/1:5,24:29:87.21:2593,87,0	1/1:3,22:27:75.24:2237,75,0	1/1:2,15:19:51.18:1460,51,0	1/1:2,21:24:63.22:1919,63,0	1/1:1,13:17:45.15:1419,45,0	1/1:4,19:24:66.23:2014,66,0	1/1:4,21:27:75.26:2267,75,0	1/1:5,15:23:54.15:1598,54,0	1/1:3,21:26:69.24:2145,69,0	1/1:4,17:22:57.20:1655,57,0	1/1:6,12:19:57.19:1545,57,0	1/1:5,23:28:72.12:2054,72,0	1/1:4,19:24:54.19:1644,54,0	1/1:2,18:21:57.67:1786,58,0	1/1:1,19:21:60.21:1875,60,0	1/1:2,23:26:66.23:2053,66,0	1/1:23,0:23:66.23:1616,66,0	1/1:2,15:18:54.17:1609,54,0	1/1:1,28:33:81.28:2567,81,0	1/1:0,18:19:54.19:1708,54,0
chr10	88230786	.	T	TTTTCC	39021.85	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.571;DP=661;FS=1.108;HRun=0;HaplotypeScore=136.7552;InbreedingCoeff=0.9897;MQ=83.92;MQ0=0;MQRankSum=-11.394;QD=63.87;ReadPosRankSum=7.684;VQSLOD=5.0365;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,42:49:99:3906,129,0	1/1:12,0:12:14.15:769,14,0	0/0:25,0:25:72.25:0,72,1517	0/0:25,0:25:69.20:0,69,1404	1/1:22,0:22:34.10:1100,34,0	1/1:20,0:20:57.16:1172,57,0	1/1:24,0:24:43.25:1427,43,0	1/1:28,0:28:77.22:1823,77,0	1/1:29,0:29:87.21:1922,87,0	1/1:25,0:25:43.86:1549,44,0	1/1:19,0:19:51.17:1085,51,0	1/1:24,0:24:63.22:1418,63,0	1/1:16,0:16:45.15:1063,45,0	1/1:23,0:23:43.30:1457,43,0	1/1:27,0:27:75.26:1670,75,0	1/1:20,0:21:32.21:1153,32,0	1/1:26,0:26:69.24:1605,69,0	1/1:22,0:22:35.25:1210,35,0	1/1:18,0:18:54.18:1113,54,0	1/1:27,0:26:66.18:1516,66,0	1/1:23,0:23:54.18:1218,54,0	1/1:21,0:21:57.20:1317,57,0	1/1:21,0:21:60.21:1430,60,0	1/1:26,0:26:66.23:1512,66,0	1/1:1,22:24:69.24:2220,69,0	1/1:17,0:17:51.18:1145,51,0	1/1:28,0:28:81.28:1926,81,0	1/1:19,0:19:54.19:1296,54,0
chr10	88232372	.	TTC	T	531.66	PASS	AB=1.000;AC=28;AF=0.636;AN=44;BaseQRankSum=4.627;DP=599;FS=2.511;HRun=0;HaplotypeScore=119.6035;InbreedingCoeff=0.4188;MQ=69.00;MQ0=10;MQRankSum=-0.649;QD=1.50;ReadPosRankSum=1.890;VQSLOD=1.8826;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:24:20.51:21,0,61	./.	./.	0/1:36,0:23:0:0,0,0	./.	1/1:18,3:21:2.94:32,3,0	0/0:20,0:18:12.04:0,12,144	0/0:33,0:32:7.84:0,8,77	0/1:14,0:14:0:0,0,0	0/1:23,0:23:14.54:15,0,31	1/1:18,0:18:2.37:8,2,0	1/1:27,1:27:23.79:227,24,0	./.	1/1:15,4:19:3.01:32,3,0	1/1:22,0:22:17.46:119,17,0	1/1:18,0:18:2.99:24,3,0	1/1:16,0:16:2.96:20,3,0	0/0:16,0:16:17.61:0,18,188	1/1:22,0:21:1.50:5,1,0	1/1:23,0:23:4.73:13,5,0	0/0:22,0:22:2.99:0,3,24	1/1:21,0:20:5.88:47,6,0	./.	1/1:29,0:29:17.22:99,17,0	0/0:20,0:20:5.50:0,5,50	0/0:25,0:25:23.29:0,23,203	1/1:19,0:19:2.37:8,2,0	./.
chr10	88232410	.	CT	C	313.72	PASS	AB=0.891;AC=6;AF=0.107;AN=56;BaseQRankSum=5.978;DP=485;FS=3.841;HRun=1;HaplotypeScore=103.8950;InbreedingCoeff=-0.0654;MQ=40.71;MQ0=32;MQRankSum=-2.117;QD=3.61;ReadPosRankSum=-1.566;VQSLOD=-0.3207;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:22:9.64:0,10,169	0/0:6,0:6:8.63:0,9,99	0/0:31,0:3:9:0,9,86	0/0:26,0:3:9.02:0,9,100	0/1:10,1:11:14.88:15,0,80	0/0:21,0:20:41.33:0,41,485	0/0:20,0:16:26.43:0,26,389	0/0:30,0:28:71.23:0,71,867	0/0:7,0:7:11.93:0,12,163	0/0:16,0:14:30:0,30,343	0/0:18,0:18:26.56:0,27,298	0/0:23,0:21:38.53:0,39,328	0/1:4,0:4:15.58:16,0,30	0/0:21,0:20:27.81:0,28,310	0/1:13,6:17:99:185,0,108	0/0:11,0:10:22.39:0,22,252	0/1:16,1:16:21.06:21,0,153	0/0:20,0:18:44.94:0,45,591	0/0:17,0:14:30.16:0,30,385	0/0:16,0:15:23.48:0,23,201	0/0:12,0:10:6.02:0,6,84	0/0:23,0:21:0.16:0,0,156	0/1:10,1:10:0:0,0,1	0/1:19,4:24:37.85:190,0,38	0/0:18,0:18:5.80:0,6,86	0/0:16,0:16:48.07:0,48,615	0/0:12,0:12:3.64:0,4,167	0/0:7,0:5:15.02:0,15,171
chr10	88232413	.	TCTCTCCTC	T	2038.42	PASS	AB=0.946;AC=25;AF=0.446;AN=56;BaseQRankSum=6.397;DP=449;FS=5.932;HRun=0;HaplotypeScore=120.2707;InbreedingCoeff=0.4070;MQ=42.94;MQ0=31;MQRankSum=-1.348;QD=8.79;ReadPosRankSum=2.589;VQSLOD=2.0042;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:20:22.49:22,0,60	0/1:5,0:5:0.33:27,0,0	0/0:33,0:4:10.28:0,10,217	0/1:32,0:7:12.74:13,0,115	1/1:9,0:9:6.02:99,6,0	0/0:20,0:19:24.08:0,24,561	0/0:21,0:18:6.59:0,7,488	0/0:31,0:29:39.31:0,39,711	1/1:6,0:6:13.78:231,14,0	0/1:6,9:13:22.85:243,0,23	1/1:15,0:15:4.28:94,4,0	0/1:23,0:21:99:135,0,398	0/0:3,0:3:0.47:0,0,1	0/0:18,0:17:23.57:0,24,434	1/1:18,0:16:8.46:317,8,0	1/1:10,0:9:17.80:293,18,0	1/1:10,6:15:2.59:84,3,0	0/0:20,0:18:37.25:0,37,798	0/1:15,0:12:18.50:225,0,18	1/1:8,0:7:10.75:104,11,0	0/0:13,0:11:12.02:0,12,240	0/0:19,0:17:5.80:0,6,326	0/1:9,0:8:0:0,0,0	1/1:21,0:20:10.67:238,11,0	0/0:18,0:18:5.81:0,6,50	0/0:16,0:15:32.79:0,33,399	1/1:6,0:6:8.39:92,8,0	0/0:5,0:3:9.03:0,9,203
chr10	88232417	.	TC	T	696.23	PASS	AB=0.949;AC=29;AF=0.518;AN=56;BaseQRankSum=4.537;DP=432;FS=9.086;HRun=2;HaplotypeScore=91.1784;InbreedingCoeff=0.2891;MQ=46.61;MQ0=29;MQRankSum=-0.533;QD=3.01;ReadPosRankSum=1.788;VQSLOD=-0.4663;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:18,2:16:12.74:28,0,13	1/1:4,0:4:1.96:17,2,0	0/0:37,0:6:14.64:0,15,169	0/1:36,1:13:20.95:21,0,93	1/1:9,0:9:6.01:58,6,0	0/0:15,0:14:26.68:0,27,327	0/0:21,0:18:25.28:0,25,317	0/0:32,0:30:27.59:0,28,348	1/1:6,0:6:12.53:87,13,0	1/1:11,0:10:11.14:69,11,0	1/1:4,1:13:7.92:58,8,0	0/0:19,0:18:37.15:0,37,307	1/1:3,0:3:0.47:1,0,0	0/0:19,0:18:24.44:0,24,285	0/1:16,0:14:43.74:89,0,44	1/1:9,0:8:6.42:120,6,0	1/1:12,0:11:2.17:8,2,0	0/0:18,0:16:0.63:0,1,387	1/1:12,0:9:17.17:112,17,0	0/1:8,0:7:12.32:15,0,12	0/0:15,0:13:6.25:0,6,169	0/0:18,0:17:24.59:0,25,268	1/1:10,0:9:2.88:30,3,0	0/1:18,1:18:26.80:49,0,27	1/1:18,1:19:2.82:35,3,0	0/1:13,4:16:64.49:64,0,173	0/1:5,0:5:9:13,0,9	0/0:7,0:5:9.03:0,9,119
chr10	88232418	.	C	CT	616.24	PASS	AB=0.977;AC=25;AF=0.446;AN=56;BaseQRankSum=5.135;DP=427;FS=4.966;HRun=1;HaplotypeScore=96.1397;InbreedingCoeff=0.1733;MQ=46.79;MQ0=30;MQRankSum=1.139;QD=2.71;ReadPosRankSum=2.074;VQSLOD=-0.1241;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:13:14.51:15,0,15	1/1:3,0:3:1.85:16,2,0	0/0:39,0:6:13.86:0,14,164	0/1:40,0:15:17.44:17,0,101	1/1:11,0:11:10.83:69,11,0	0/0:15,0:14:29.10:0,29,349	0/0:21,0:18:21.39:0,21,326	0/0:30,0:28:51.80:0,52,429	1/1:5,1:6:12.48:80,12,0	1/1:10,0:10:4.15:55,4,0	0/1:13,0:13:6.86:43,0,7	0/0:19,0:18:41.68:0,42,407	0/0:3,0:3:2.04:0,2,6	0/0:19,0:18:25.48:0,25,303	0/1:16,0:14:70.07:70,0,111	1/1:9,0:8:6.35:106,6,0	0/0:11,1:11:3.94:0,4,12	0/0:17,0:15:14.01:0,14,405	1/1:12,0:9:5.05:93,5,0	0/1:7,0:6:13.35:15,0,13	0/1:11,4:13:29.89:30,0,164	0/0:18,0:17:25:0,25,303	1/1:10,0:9:2.63:26,3,0	0/1:19,0:18:33.67:34,0,79	1/1:19,0:19:2.38:15,2,0	0/1:14,0:13:93.37:93,0,186	0/1:5,0:5:12.77:13,0,24	0/0:7,0:5:9.03:0,9,120
chr10	88232431	.	CTCCTCCTCT	C	2085.42	PASS	AB=0.997;AC=24;AF=0.429;AN=56;BaseQRankSum=6.395;DP=454;FS=6.880;HRun=0;HaplotypeScore=135.5077;InbreedingCoeff=0.5535;MQ=62.75;MQ0=26;MQRankSum=-1.238;QD=9.19;ReadPosRankSum=-2.254;VQSLOD=1.0810;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,2:18:34.34:285,34,0	0/0:5,0:5:14.29:0,14,85	0/1:53,0:16:18.58:19,0,745	0/0:61,0:29:24.35:0,24,526	1/1:14,0:14:16.04:235,16,0	0/0:17,0:16:39.05:0,39,1394	0/0:15,0:14:2.76:0,3,946	0/0:21,0:20:51.52:0,52,1464	1/1:10,0:9:23.92:224,24,0	0/0:15,0:14:9.15:0,9,158	0/1:12,0:12:2.65:3,0,95	0/0:16,0:16:45.03:0,45,1179	0/1:5,0:4:13.73:14,0,35	0/0:16,0:15:34.60:0,35,1085	0/1:12,0:12:8.84:279,0,9	1/1:10,0:9:24.83:234,25,0	0/1:11,0:10:6.75:7,0,87	0/0:12,0:11:24.55:0,25,1218	0/1:18,0:16:32.69:229,0,33	1/1:9,0:8:11.95:100,12,0	0/0:12,0:10:27.02:0,27,815	0/0:18,0:17:42.05:0,42,1275	1/1:11,0:10:11.81:104,12,0	1/1:15,2:16:10.94:288,11,0	1/1:3,13:16:23.77:171,24,0	0/0:10,0:9:27.08:0,27,876	1/1:6,0:6:12.28:99,12,0	0/0:7,0:6:18.02:0,18,541
chr10	88232434	.	CTCCTCT	C	4024.43	PASS	AB=0.996;AC=29;AF=0.518;AN=56;BaseQRankSum=4.987;DP=471;FS=20.671;HRun=0;HaplotypeScore=116.9627;InbreedingCoeff=0.6153;MQ=64.99;MQ0=23;MQRankSum=-0.696;QD=15.78;ReadPosRankSum=-0.673;VQSLOD=1.6943;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,1:18:39.62:293,40,0	0/1:4,0:4:21.16:21,0,35	0/1:55,0:18:13.35:13,0,565	0/0:64,0:31:8.96:0,9,439	1/1:10,4:14:30.03:433,30,0	0/0:17,0:17:42.03:0,42,981	0/0:14,0:14:22.07:0,22,703	0/0:24,0:23:56.33:0,56,1049	1/1:9,2:10:26.97:442,27,0	0/1:18,0:17:96.67:97,0,156	0/1:12,0:12:17.43:17,0,98	0/0:16,0:16:46.68:0,47,771	1/1:5,1:5:5.94:41,6,0	0/0:16,0:15:36.85:0,37,769	1/1:11,1:13:32.48:526,32,0	1/1:9,1:9:26.99:476,27,0	0/1:11,0:10:16.28:16,0,65	0/0:10,0:11:20.73:0,21,880	1/1:12,3:17:27.96:564,28,0	1/1:7,2:8:12:179,12,0	0/0:12,0:11:30.02:0,30,628	0/0:20,0:19:47.97:0,48,911	1/1:7,4:10:14.80:166,15,0	1/1:16,1:16:33.12:365,33,0	1/1:17,0:16:23.77:171,24,0	0/0:10,0:9:26.56:0,27,577	1/1:4,2:6:15.02:204,15,0	0/0:8,0:7:21.02:0,21,419
chr10	88232505	.	GTC	G	10524.59	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=7.452;DP=657;FS=0.986;HRun=0;HaplotypeScore=138.0771;InbreedingCoeff=0.7826;MQ=54.35;MQ0=2;MQRankSum=-2.156;QD=29.81;ReadPosRankSum=2.561;VQSLOD=6.5552;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:66.01:964,66,0	0/0:3,0:3:9:0,9,77	0/0:37,0:27:53.05:0,53,956	0/0:27,1:24:54.02:0,54,833	1/1:2,17:19:45.15:679,45,0	0/0:19,0:19:44.23:0,44,933	0/0:39,0:39:99:0,99,1820	0/1:16,0:16:99:109,0,125	1/1:1,30:30:75.25:1144,75,0	0/0:30,0:30:26.72:0,27,462	0/1:16,0:16:9.92:10,0,235	0/0:32,0:32:84.26:0,84,1513	1/1:1,26:26:63.21:959,63,0	0/0:25,0:25:66.23:0,66,1235	1/1:0,23:23:66.22:997,66,0	1/1:0,17:17:45.15:669,45,0	0/0:17,0:17:38.96:0,39,363	0/0:17,0:17:45.11:0,45,750	1/1:0,17:17:45.04:630,45,0	1/1:0,27:26:72.24:1056,72,0	0/1:38,0:38:52.93:53,0,587	0/0:26,0:26:72.23:0,72,1311	1/1:2,20:22:48.08:699,48,0	1/1:0,32:32:75.25:1121,75,0	1/1:5,9:13:30.06:414,30,0	0/0:24,0:24:68.74:0,69,585	1/1:0,26:26:69.23:1021,69,0	0/0:7,0:7:17.75:0,18,142
chr10	88233239	.	A	AAATCAATCAATCAATC	22143.96	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=13.753;DP=577;FS=14.652;HRun=0;HaplotypeScore=283.1034;InbreedingCoeff=0.9783;MQ=64.87;MQ0=0;MQRankSum=-16.093;QD=67.72;ReadPosRankSum=-1.541;VQSLOD=2.9553;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,2:24:47.88:1645,48,0	1/1:4,0:4:6.02:381,6,0	0/0:22,0:22:30.10:0,30,747	0/0:29,0:27:48.14:0,48,1121	1/1:16,0:16:33.07:931,33,0	0/0:24,0:24:60.19:0,60,2238	0/0:20,0:20:33.10:0,33,1171	0/0:38,0:38:81.22:0,81,2375	1/1:22,0:22:41.02:1199,41,0	1/1:32,0:32:81.25:2885,81,0	1/1:14,0:14:24.04:1352,24,0	0/0:19,0:19:54.17:0,54,2202	1/1:15,0:15:40.58:1152,41,0	0/0:22,0:22:36.12:0,36,1490	1/1:26,0:26:57.04:1463,57,0	1/1:23,0:23:57.13:1806,57,0	1/1:12,0:12:20.97:630,21,0	0/0:9,0:9:18.06:0,18,799	1/1:20,0:20:33.07:940,33,0	1/1:27,0:27:50.96:1337,51,0	0/0:31,0:31:72.23:0,72,2832	0/0:15,0:15:36.11:0,36,1357	1/1:26,0:26:68.89:1704,69,0	1/1:14,0:14:20.96:510,21,0	1/1:20,6:26:51.16:2649,51,0	0/0:17,0:17:36.12:0,36,1454	1/1:25,0:26:51.09:1561,51,0	0/0:4,0:4:12.04:0,12,441
chr10	88233247	.	CA	C	222.12	PASS	AB=0.798;AC=2;AF=0.036;AN=56;BaseQRankSum=2.985;DP=575;FS=4.005;HRun=2;HaplotypeScore=168.0094;InbreedingCoeff=-0.0505;MQ=64.18;MQ0=0;MQRankSum=-3.751;QD=5.29;ReadPosRankSum=1.208;VQSLOD=0.7349;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.10:0,60,803	0/0:4,0:4:6:0,6,52	0/0:20,0:20:60.20:0,60,879	0/0:30,0:28:76.92:0,77,1050	0/0:18,0:18:45.09:0,45,579	0/0:26,0:26:78.25:0,78,1138	0/0:18,0:18:51.17:0,51,757	0/0:40,0:40:99:0,117,1736	0/0:23,0:23:63.10:0,63,782	0/1:22,10:32:99:260,0,721	0/0:14,0:14:0.77:0,1,352	0/0:19,0:19:57.19:0,57,851	0/0:17,0:17:44.12:0,44,520	0/0:22,0:22:63.21:0,63,931	0/0:26,0:26:72.23:0,72,980	0/0:22,0:22:66.17:0,66,841	0/1:8,2:10:50.68:51,0,262	0/0:9,0:9:27.09:0,27,402	0/0:16,0:16:48.12:0,48,635	0/0:31,0:31:81.17:0,81,1090	0/0:29,0:29:87.29:0,87,1292	0/0:17,0:17:51.12:0,51,716	0/0:25,0:25:72.20:0,72,972	0/0:13,0:13:22.38:0,22,282	0/0:24,0:24:60.08:0,60,739	0/0:16,0:16:48.16:0,48,715	0/0:25,0:25:60.18:0,60,788	0/0:6,0:6:15.03:0,15,204
chr10	88233257	.	A	ATCAATCAATCAG	19890.89	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=13.310;DP=612;FS=27.447;HRun=0;HaplotypeScore=249.1379;InbreedingCoeff=0.8407;MQ=69.78;MQ0=0;MQRankSum=-16.747;QD=58.33;ReadPosRankSum=2.019;VQSLOD=3.2044;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:57.88:489,0,58	1/1:1,0:8:6.02:317,6,0	0/0:24,0:24:63.10:0,63,1132	0/0:34,0:31:70.39:0,70,1425	1/1:15,6:22:44.19:1086,44,0	0/0:26,0:26:78.18:0,78,2188	0/0:14,0:14:42.10:0,42,1149	0/0:45,0:45:99:0,126,2689	1/1:14,7:21:53.47:1516,53,0	1/1:29,0:34:94.96:2363,95,0	1/1:4,0:24:29.84:1156,30,0	0/0:25,0:25:61.21:0,61,2042	1/1:9,7:16:42.70:1454,43,0	0/0:20,0:20:51.12:0,51,1415	1/1:19,7:26:59.52:1759,60,0	1/1:13,9:22:62.48:1905,62,0	1/1:8,0:9:23.85:467,24,0	0/0:12,0:12:30.03:0,30,771	1/1:15,2:17:41.94:1023,42,0	1/1:27,4:32:74.01:1429,74,0	0/0:32,0:32:93.23:0,93,2641	0/0:19,0:19:57.06:0,57,1392	1/1:21,6:27:70.89:1454,71,0	1/1:10,4:14:21.70:683,22,0	0/1:25,0:25:64.59:1014,0,65	0/0:13,0:13:39.13:0,39,1333	1/1:17,7:25:50.91:1774,51,0	0/0:7,0:7:21.01:0,21,452
chr10	88233334	.	ATAGGATGG	A	18628.15	PASS	AB=0.958;AC=33;AF=0.589;AN=56;BaseQRankSum=18.226;DP=559;FS=1.870;HRun=0;HaplotypeScore=218.5224;InbreedingCoeff=0.9173;MQ=79.34;MQ0=0;MQRankSum=-18.304;QD=61.08;ReadPosRankSum=2.841;VQSLOD=4.9711;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:33.11:965,33,0	1/1:0,3:3:9.03:263,9,0	0/0:17,0:17:44.36:0,44,1734	0/0:20,0:20:50.35:0,50,2117	1/1:0,24:24:60.20:1696,60,0	0/0:29,0:29:84.26:0,84,3583	0/0:19,0:19:57.20:0,57,2483	0/0:35,0:35:99:0,105,4294	1/1:4,12:16:30.10:875,30,0	1/1:3,28:31:84:2245,84,0	1/1:3,22:25:66.23:1872,66,0	0/0:28,0:28:84.29:0,84,3792	1/1:0,12:12:30.10:835,30,0	0/0:22,0:22:66.23:0,66,2861	1/1:2,17:19:45.15:1315,45,0	1/1:2,12:14:36.12:1051,36,0	1/1:0,8:8:21.07:614,21,0	0/0:14,0:14:42.14:0,42,1808	1/1:1,13:14:32.92:760,33,0	1/1:2,22:24:54.19:1576,54,0	0/0:34,0:34:99:0,102,4409	0/0:29,0:29:87.23:0,87,3613	1/1:1,15:16:36.12:1049,36,0	1/1:1,11:12:21.07:608,21,0	1/1:1,23:24:51.18:1490,51,0	0/1:22,1:23:18.30:18,0,2624	1/1:0,21:21:48.16:1397,48,0	0/0:7,0:7:21.07:0,21,951
chr10	88234178	.	T	TA	16046.06	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=16.432;DP=625;FS=3.486;HRun=2;HaplotypeScore=122.5440;InbreedingCoeff=0.9944;MQ=88.87;MQ0=0;MQRankSum=-5.923;QD=35.42;ReadPosRankSum=5.137;VQSLOD=4.3336;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:35:89.31:1217,89,0	1/1:0,8:8:24.08:321,24,0	0/0:32,0:33:72.18:0,72,976	0/0:27,0:27:75.12:0,75,891	1/1:3,25:28:74.20:899,74,0	0/0:22,0:22:60.19:0,60,744	0/0:17,0:17:51.15:0,51,621	1/1:0,25:25:75.22:991,75,0	1/1:0,29:29:84.21:1111,84,0	1/1:0,18:19:54.17:714,54,0	1/1:3,22:25:65.72:842,66,0	0/0:19,0:19:57.18:0,57,706	1/1:2,23:25:62.69:834,63,0	0/0:21,0:21:63.19:0,63,769	1/1:3,15:18:39.11:513,39,0	1/1:1,24:25:72.24:979,72,0	1/1:2,25:27:69.23:932,69,0	0/0:10,0:10:30.09:0,30,369	1/1:2,20:22:63.17:837,63,0	1/1:1,24:25:69.23:935,69,0	1/1:1,15:16:45.15:609,45,0	0/0:23,0:23:66.21:0,66,818	1/1:1,19:20:51.13:666,51,0	1/1:3,18:20:57.17:746,57,0	1/1:1,19:20:51.10:664,51,0	1/1:4,26:30:79.14:1058,79,0	1/1:2,27:29:75.25:1019,75,0	1/1:0,6:6:12.04:157,12,0
chr10	88234778	.	CCAG	C	4776	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=-2.850;DP=366;FS=3.648;HRun=0;HaplotypeScore=92.7288;InbreedingCoeff=0.6908;MQ=54.26;MQ0=0;MQRankSum=1.528;QD=16.19;ReadPosRankSum=-0.325;VQSLOD=4.5722;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:67.66:484,68,0	1/1:3,0:3:8.86:57,9,0	0/0:8,0:3:2.28:0,2,44	0/0:5,0:3:2.11:0,2,37	1/1:16,0:16:33.42:273,33,0	0/0:9,0:9:14.73:0,15,105	0/0:17,0:17:44.74:0,45,412	1/1:11,0:11:0.99:181,1,0	1/1:22,0:22:60.97:435,61,0	1/1:0,17:17:35.57:264,36,0	1/1:0,9:9:2.92:17,3,0	0/0:7,0:7:15.48:0,15,184	1/1:19,0:19:52.50:385,52,0	0/0:9,0:8:19.81:0,20,167	1/1:20,0:20:46.29:320,46,0	1/1:11,0:11:32.76:248,33,0	1/1:9,0:9:19.54:131,20,0	0/0:9,0:9:26.94:0,27,314	1/1:21,0:21:35.30:316,35,0	1/1:18,0:18:41.40:317,41,0	1/1:24,0:24:47.73:372,48,0	0/0:7,0:7:11.96:0,12,164	1/1:12,0:12:17.74:124,18,0	1/1:13,0:13:23.60:159,24,0	1/1:14,0:14:36.88:273,37,0	0/1:9,0:8:44.46:60,0,44	1/1:15,1:16:41.03:319,41,0	0/1:3,0:3:15.08:40,0,15
chr10	88235552	.	ATACT	A	4789.62	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.386;DP=602;FS=1.988;HRun=0;HaplotypeScore=97.7165;InbreedingCoeff=0.9972;MQ=77.37;MQ0=0;MQRankSum=-2.635;QD=51.50;ReadPosRankSum=2.800;VQSLOD=5.8478;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.26:0,75,1998	1/1:0,12:12:36.12:698,36,0	0/0:16,0:16:48.16:0,48,1152	0/0:18,0:18:51.18:0,51,1360	0/0:30,0:30:72.21:0,72,1907	0/0:28,0:28:84.27:0,84,2207	0/0:14,0:14:39.13:0,39,1025	0/0:33,0:33:96.32:0,96,2516	0/0:18,0:18:51.09:0,51,1328	1/1:2,32:34:96.33:1853,96,0	1/1:1,26:27:63.22:1215,63,0	0/0:25,0:25:69.24:0,69,1889	0/0:23,0:23:66.23:0,66,1798	0/0:20,0:20:60.21:0,60,1641	0/0:13,0:13:39.13:0,39,1033	0/0:15,0:15:45.15:0,45,1231	1/1:1,19:20:54.18:1023,54,0	0/0:18,0:18:54.19:0,54,1420	0/0:11,0:11:33.11:0,33,803	0/0:36,0:36:99:0,108,2874	0/0:16,0:16:45.15:0,45,1226	0/0:34,0:34:99:0,102,2658	0/0:25,0:25:72.25:0,72,1901	0/0:7,0:7:18.06:0,18,493	0/0:30,0:30:90.31:0,90,2448	0/0:31,1:32:32.16:0,32,2241	0/0:11,0:11:33.11:0,33,903	0/0:10,0:10:27.09:0,27,713
chr10	88235692	.	T	TCAC	4424.34	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=10.313;DP=624;FS=0.479;HRun=0;HaplotypeScore=133.2711;InbreedingCoeff=0.9113;MQ=64.19;MQ0=4;MQRankSum=-6.051;QD=24.31;ReadPosRankSum=1.878;VQSLOD=4.7516;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:16.90:0,17,152	./.	0/0:38,0:23:21.73:0,22,326	0/0:36,0:29:16.83:0,17,304	1/1:8,1:10:11.69:239,12,0	0/0:16,0:16:36.11:0,36,486	0/0:36,0:35:66.12:0,66,830	0/0:24,0:24:21.06:0,21,280	1/1:11,5:16:32.01:425,32,0	0/0:21,0:20:29.99:0,30,377	0/0:6,0:6:0.47:0,0,1	0/0:42,0:42:96.29:0,96,1303	1/1:18,3:22:47.21:648,47,0	0/0:30,0:29:75.25:0,75,1052	1/1:10,16:26:35.35:550,35,0	1/1:15,3:18:43.78:607,44,0	0/0:20,0:20:8.03:0,8,181	0/0:18,0:18:36.05:0,36,453	1/1:12,7:19:24.76:503,25,0	1/1:6,9:15:20.55:364,21,0	0/0:56,0:54:99:0,123,1704	0/0:21,0:21:51.16:0,51,696	1/1:6,0:6:3.01:60,3,0	1/1:18,5:23:28.02:359,28,0	0/0:11,0:11:6.02:0,6,84	0/0:15,0:15:30.09:0,30,407	1/1:15,11:26:39.18:669,39,0	0/0:14,0:14:36.09:0,36,482
chr10	88235714	.	CATCACCACT	C	5882.93	PASS	AB=0.990;AC=25;AF=0.446;AN=56;BaseQRankSum=14.177;DP=743;FS=16.711;HRun=0;HaplotypeScore=208.6428;InbreedingCoeff=0.6173;MQ=49.68;MQ0=31;MQRankSum=-5.925;QD=21.95;ReadPosRankSum=3.176;VQSLOD=2.7039;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:29:27.85:28,0,132	1/1:4,0:3:2.96:19,3,0	0/0:62,0:26:62.95:0,63,1289	0/0:55,0:34:76.78:0,77,1514	1/1:4,5:8:12.48:136,12,0	0/0:22,0:20:60.19:0,60,1736	0/0:40,0:39:99:0,111,3405	0/0:27,0:26:69.19:0,69,1669	1/1:8,8:15:36.08:711,36,0	0/1:24,0:21:99:122,0,315	0/1:7,0:7:0:0,0,0	0/0:44,0:44:99:0,132,4627	1/1:15,7:22:57.48:983,57,0	0/0:35,0:34:99:0,99,3817	1/1:18,8:25:42.07:769,42,0	1/1:11,10:21:23.96:966,24,0	0/1:18,0:18:45.49:194,0,45	0/0:19,0:18:51.16:0,51,1626	0/1:19,1:17:44.78:342,0,45	1/1:9,2:10:20.84:230,21,0	0/0:83,0:77:99:0,205,6566	0/0:23,0:22:63.19:0,63,2127	1/1:7,1:8:3:26,3,0	1/1:23,6:29:45.50:698,45,0	0/0:10,0:9:6.02:0,6,134	0/0:34,0:29:79.46:0,79,2006	1/1:13,7:20:39.54:658,40,0	0/0:21,0:20:57.17:0,57,1785
chr10	88235717	.	CACCACTACCATCATT	C	6827.60	PASS	AC=30;AF=0.556;AN=54;BaseQRankSum=15.447;DP=735;FS=11.746;HRun=0;HaplotypeScore=273.5241;InbreedingCoeff=0.8764;MQ=49.26;MQ0=30;MQRankSum=-7.747;QD=26.26;ReadPosRankSum=3.593;VQSLOD=1.9919;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,22:28:8.97:175,9,0	1/1:1,3:3:3.01:54,3,0	0/0:61,0:26:62.20:0,62,1317	0/0:56,0:34:41.54:0,42,1723	1/1:9,0:8:11.71:103,12,0	0/0:22,0:20:57.10:0,57,1895	0/0:39,0:38:99:0,102,3637	0/0:30,0:29:71.56:0,72,1792	1/1:15,0:14:35.93:666,36,0	1/1:3,20:20:41.92:831,42,0	./.	0/0:43,0:43:99:0,123,4795	1/1:21,0:21:50.90:862,51,0	0/0:36,0:35:99:0,102,4360	1/1:24,0:23:42.02:729,42,0	1/1:20,0:20:8.96:902,9,0	1/1:3,14:17:23.79:608,24,0	0/0:18,0:17:26.94:0,27,1588	1/1:20,0:17:0.15:334,0,0	1/1:11,0:10:20.93:221,21,0	0/0:84,0:78:99:0,213,7217	0/0:23,0:22:56.13:0,56,2011	1/1:3,5:8:2.96:19,3,0	1/1:29,0:29:41.20:723,41,0	1/1:2,8:9:5.92:39,6,0	0/0:34,0:29:79.42:0,79,2522	1/1:17,0:17:38.83:561,39,0	0/0:22,0:21:57.15:0,57,1789
chr10	88235729	.	CATT	C	1914.61	PASS	AB=0.774;AC=13;AF=0.232;AN=56;BaseQRankSum=11.280;DP=728;FS=13.151;HRun=0;HaplotypeScore=154.6767;InbreedingCoeff=-0.1499;MQ=50.98;MQ0=27;MQRankSum=-9.903;QD=9.03;ReadPosRankSum=5.996;VQSLOD=1.9487;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:25:14.45:14,0,67	1/1:4,0:3:2.92:17,3,0	0/0:59,0:25:67.41:0,67,1392	0/0:61,0:36:71.56:0,72,1632	0/0:4,5:8:12.08:0,12,66	0/0:21,0:19:57.20:0,57,1318	0/0:45,0:44:99:0,128,2738	0/0:37,0:36:95.73:0,96,1907	0/1:3,9:12:85.52:284,0,86	0/1:23,0:21:99:187,0,152	0/0:7,0:7:0.47:0,0,1	0/0:44,0:44:99:0,106,2661	0/1:9,9:18:99:398,0,100	0/0:38,0:37:99:0,108,2360	0/1:11,9:19:99:221,0,163	0/1:4,14:18:99:424,0,122	0/1:18,0:18:44.76:67,0,45	0/0:19,0:18:54.16:0,54,1122	0/1:16,1:15:15.49:15,0,448	0/1:10,2:9:9.57:10,0,141	0/0:87,0:83:99:0,231,4952	0/0:17,0:17:48.03:0,48,1022	0/0:5,1:6:2.88:0,3,15	0/1:4,22:26:99:319,0,108	0/0:9,0:8:6.02:0,6,76	0/0:33,0:28:78.74:0,79,1810	0/1:8,7:15:99:108,0,233	0/0:22,0:21:63.17:0,63,1355
chr10	88236054	.	AAT	A	1312.83	PASS	AB=0.857;AC=13;AF=0.232;AN=56;BaseQRankSum=4.488;DP=349;FS=0.000;HRun=0;HaplotypeScore=49.5232;InbreedingCoeff=0.7171;MQ=69.43;MQ0=1;MQRankSum=2.241;QD=18.49;ReadPosRankSum=1.169;VQSLOD=3.3544;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.19:0,60,947	0/0:1,0:4:9:0,9,80	0/0:9,0:7:2.37:0,2,8	0/0:11,0:7:3.01:0,3,43	0/0:15,0:15:1.68:0,2,546	1/1:3,15:18:39.12:492,39,0	1/1:3,5:8:12.04:151,12,0	0/0:32,0:32:72.25:0,72,1178	0/0:7,0:7:15.05:0,15,239	0/0:4,0:12:23.96:0,24,202	0/0:4,0:16:17.96:0,18,148	1/1:3,6:8:9.03:114,9,0	0/0:8,0:8:12.03:0,12,174	1/1:2,2:4:6.02:76,6,0	0/0:7,0:7:21.07:0,21,347	0/0:7,0:7:18.06:0,18,297	0/0:2,0:23:57.03:0,57,506	1/1:2,17:19:39.12:492,39,0	0/0:21,0:21:51.16:0,51,811	0/0:13,0:13:29.82:0,30,447	0/0:4,0:4:6.02:0,6,100	1/1:2,5:7:12:133,12,0	0/0:7,0:7:12.04:0,12,197	0/1:5,1:6:28.84:29,0,91	0/0:19,0:19:51.17:0,51,801	0/0:11,0:11:21.07:0,21,345	0/0:10,0:10:24.08:0,24,389	0/0:19,0:19:42.14:0,42,684
chr10	88237791	.	AT	A	7330.61	PASS	AB=1.000;AC=52;AF=0.929;AN=56;BaseQRankSum=3.123;DP=547;FS=3.478;HRun=3;HaplotypeScore=179.6911;InbreedingCoeff=-0.0561;MQ=80.88;MQ0=1;MQRankSum=0.157;QD=13.40;ReadPosRankSum=6.835;VQSLOD=3.8530;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:36:34.12:386,34,0	1/1:12,0:12:31.87:186,32,0	1/1:22,1:23:29.90:217,30,0	0/1:17,0:17:58.52:122,0,59	1/1:19,0:19:42.24:245,42,0	1/1:20,0:20:27.34:257,27,0	1/1:13,0:13:34.36:176,34,0	1/1:26,0:26:62.07:305,62,0	1/1:21,1:22:47.89:286,48,0	1/1:23,0:23:65.74:363,66,0	1/1:18,0:18:46.13:260,46,0	1/1:20,0:20:57.97:336,58,0	0/1:15,0:15:0.68:201,0,1	1/1:13,1:14:38.19:261,38,0	1/1:21,0:21:57.75:331,58,0	1/1:17,0:17:49.14:277,49,0	1/1:22,0:22:39.73:229,40,0	1/1:21,0:21:50.22:304,50,0	1/1:19,0:18:30.81:243,31,0	1/1:27,0:27:56.73:332,57,0	0/1:23,0:23:2.33:253,0,2	1/1:21,0:21:52.20:305,52,0	1/1:14,1:15:34.81:215,35,0	1/1:13,0:13:32.11:198,32,0	1/1:23,0:23:57.86:337,58,0	1/1:21,0:21:49.95:296,50,0	1/1:18,0:18:53.14:349,53,0	0/1:7,0:7:5.96:62,0,6
chr10	88238269	.	CCCCCCG	C	8323.15	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=8.265;DP=454;FS=8.615;HRun=0;HaplotypeScore=116.8721;InbreedingCoeff=0.9610;MQ=63.16;MQ0=2;MQRankSum=-10.564;QD=39.08;ReadPosRankSum=9.831;VQSLOD=2.8243;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:39.36:0,39,298	0/0:4,0:4:9.02:0,9,128	0/0:13,0:11:33.01:0,33,432	0/0:15,0:11:10.01:0,10,339	1/1:0,29:29:44.58:638,45,0	0/0:13,0:13:23.77:0,24,186	0/0:17,0:17:26.56:0,27,288	0/0:21,0:21:34.93:0,35,243	1/1:1,22:23:51.18:1099,51,0	0/0:14,0:14:35.89:0,36,362	0/0:8,0:8:21:0,21,250	0/0:9,0:9:16.95:0,17,141	1/1:3,17:20:45.11:897,45,0	0/0:12,0:12:28.52:0,29,257	1/1:0,18:18:30.10:646,30,0	1/1:2,16:18:45.15:951,45,0	0/0:16,0:16:45.08:0,45,683	0/0:12,0:12:21.01:0,21,222	1/1:2,18:20:50.94:887,51,0	1/1:8,18:26:63.54:1191,64,0	0/0:13,0:13:23.15:0,23,207	0/0:11,0:11:26.92:0,27,257	1/1:0,20:20:35.69:722,36,0	1/1:1,10:11:9.01:155,9,0	0/0:16,0:16:20.39:0,20,128	0/0:15,0:15:8.48:0,8,146	1/1:1,27:28:53.44:1137,53,0	0/0:12,0:12:23.43:0,23,159
chr10	88238431	.	TC	T	3574.78	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.039;DP=634;FS=0.828;HRun=4;HaplotypeScore=67.5034;InbreedingCoeff=0.9965;MQ=76.12;MQ0=0;MQRankSum=0.639;QD=32.50;ReadPosRankSum=-0.616;VQSLOD=3.9085;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,1632	0/0:8,0:8:18.06:0,18,251	0/0:20,0:20:57.13:0,57,759	0/0:19,0:18:51.12:0,51,671	0/0:21,0:21:63.21:0,63,881	0/0:17,0:17:51.16:0,51,698	0/0:23,0:23:69.23:0,69,961	1/1:2,37:39:99:1248,105,0	0/0:23,0:23:66.18:0,66,897	0/0:27,0:27:72.24:0,72,1001	0/0:8,0:8:21.07:0,21,294	0/0:20,0:20:51.16:0,51,696	0/0:23,0:23:66.18:0,66,902	0/0:20,0:20:60.16:0,60,814	0/0:27,0:27:69.23:0,69,966	0/0:16,0:16:45.14:0,45,613	0/0:22,0:22:63.17:0,63,858	0/0:12,0:12:36.12:0,36,504	0/0:34,0:34:99:0,99,1260	0/0:21,0:21:63.19:0,63,845	1/1:1,36:37:96.29:1152,96,0	0/0:27,0:27:78.26:0,78,1086	0/0:19,0:19:54.18:0,54,754	0/0:26,0:25:72.24:0,72,1008	0/0:22,0:22:60.18:0,60,821	1/1:0,23:23:66.19:779,66,0	0/0:27,0:27:78.21:0,78,1038	1/1:0,11:11:33.10:396,33,0
chr10	88239115	.	TAA	T	1537.62	PASS	AB=0.972;AC=22;AF=0.393;AN=56;BaseQRankSum=2.477;DP=526;FS=0.495;HRun=4;HaplotypeScore=74.7172;InbreedingCoeff=0.6500;MQ=81.95;MQ0=9;MQRankSum=-1.080;QD=7.15;ReadPosRankSum=1.717;VQSLOD=-0.4273;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:33:6:52,6,0	1/1:7,0:7:20.97:189,21,0	0/0:30,0:23:41.07:0,41,440	0/0:45,0:36:80.38:0,80,919	0/0:18,0:18:36.59:0,37,321	0/1:17,0:17:1.97:204,0,2	1/1:2,16:18:6.02:88,6,0	0/0:26,0:26:71.88:0,72,647	0/0:25,0:25:48.04:0,48,455	1/1:14,2:16:39.51:342,40,0	1/1:1,9:10:2.91:44,3,0	0/1:20,0:20:59:172,0,59	0/0:11,0:11:30.05:0,30,359	0/1:7,1:8:2.02:121,0,2	0/0:28,0:28:70.48:0,70,801	0/0:17,0:17:50.74:0,51,594	1/1:5,20:25:14.98:189,15,0	1/1:1,9:10:6.02:87,6,0	0/0:13,0:13:38.90:0,39,322	0/0:17,0:17:20.21:0,20,259	0/0:21,0:21:48.47:0,48,409	1/1:12,1:13:6.19:168,6,0	0/0:8,0:7:18.04:0,18,233	0/0:23,0:23:56.86:0,57,631	1/1:15,0:15:5.85:52,6,0	0/1:22,0:22:25.75:26,0,360	0/0:13,0:13:34.13:0,34,332	0/0:16,0:15:31.41:0,31,244
chr10	88239116	.	AAAACACAC	A	947.32	PASS	AB=0.995;AC=13;AF=0.232;AN=56;BaseQRankSum=1.689;DP=537;FS=1.184;HRun=0;HaplotypeScore=127.7500;InbreedingCoeff=0.0303;MQ=79.27;MQ0=10;MQRankSum=0.003;QD=4.81;ReadPosRankSum=0.023;VQSLOD=2.2440;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:6.02:154,6,0	0/1:8,0:8:41.70:121,0,42	0/0:26,0:21:39.76:0,40,434	0/0:43,0:35:79.78:0,80,915	0/0:17,0:17:39.76:0,40,747	0/1:20,0:20:99:122,0,628	0/0:17,0:17:6.02:0,6,105	0/0:26,0:26:71.91:0,72,665	0/0:24,0:24:48.04:0,48,611	0/1:16,0:16:99:200,0,207	0/0:9,0:9:3.01:0,3,52	0/1:19,0:20:93.54:94,0,876	0/0:12,0:12:33.53:0,34,685	0/1:8,0:8:49.82:50,0,247	0/0:29,0:29:80.44:0,80,1765	0/0:20,0:20:60.12:0,60,1491	0/1:25,0:25:2.92:3,0,199	0/0:10,0:10:6.02:0,6,105	0/0:15,0:15:44.58:0,45,527	0/0:17,0:17:44.98:0,45,589	0/0:21,0:21:46.62:0,47,401	0/1:16,0:16:99:110,0,358	0/0:11,0:9:24.06:0,24,647	0/0:26,0:26:72.11:0,72,1549	1/1:0,15:15:8.59:192,9,0	0/1:20,0:20:30.39:30,0,376	0/0:14,0:14:39.03:0,39,774	0/1:15,0:14:26.14:26,0,190
chr10	88239118	.	A	AACAC	186.78	PASS	AB=0.988;AC=10;AF=0.200;AN=50;BaseQRankSum=-0.727;DP=587;FS=1.179;HRun=0;HaplotypeScore=132.7622;InbreedingCoeff=0.0787;MQ=76.74;MQ0=14;MQRankSum=0.052;QD=1.12;ReadPosRankSum=-1.326;VQSLOD=2.0072;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:8.91:0,9,76	0/0:8,0:8:5.95:0,6,47	./.	./.	0/1:19,0:19:12.22:12,0,86	0/1:22,0:22:47.20:47,0,48	0/0:18,0:17:6:0,6,56	1/1:26,0:26:0.47:1,0,0	1/1:19,10:30:9.03:190,9,0	0/0:18,0:18:4.04:0,4,35	0/0:10,0:10:3:0,3,29	0/0:23,0:23:19.17:0,19,200	0/0:13,0:13:11.71:0,12,129	0/1:14,0:14:11.09:11,0,54	0/0:28,0:29:23.93:0,24,273	0/1:22,0:22:1.98:2,0,250	0/0:28,0:28:15.01:0,15,143	0/0:11,0:11:8.72:0,9,70	./.	0/0:12,0:18:15.02:0,15,138	0/0:26,0:24:0:0,0,0	0/1:21,0:21:38.10:38,0,43	0/1:12,0:11:0.41:0,0,87	0/0:26,0:26:29.91:0,30,317	0/0:15,0:15:5.92:0,6,56	0/0:21,0:20:3:0,3,28	0/0:15,0:15:12.69:0,13,105	0/0:11,0:16:6.01:0,6,56
chr10	88239475	.	TG	T	3053.18	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.330;DP=557;FS=1.982;HRun=2;HaplotypeScore=65.6397;InbreedingCoeff=0.9863;MQ=96.35;MQ0=0;MQRankSum=-2.719;QD=35.92;ReadPosRankSum=0.710;VQSLOD=4.1768;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.24:0,96,1388	0/0:10,0:10:30.07:0,30,426	0/0:26,0:26:75.15:0,75,1090	0/0:27,0:27:81.19:0,81,1068	0/0:7,0:7:15.05:0,15,223	0/0:16,0:16:45.15:0,45,674	0/0:24,0:24:72.24:0,72,1077	1/1:0,18:18:54.16:686,54,0	0/0:29,0:29:87.27:0,87,1262	0/0:20,0:20:57.19:0,57,854	0/0:11,0:11:33.11:0,33,492	0/0:25,0:25:69.23:0,69,1032	0/0:18,0:18:51.17:0,51,762	0/0:24,0:24:69.20:0,69,1010	0/0:27,0:27:75.25:0,75,1123	0/0:23,0:23:66.22:0,66,989	0/0:22,0:22:66.22:0,66,986	0/0:21,0:21:63.16:0,63,897	0/0:15,0:15:45.15:0,45,674	0/0:14,0:14:42.12:0,42,590	1/1:0,29:29:84.27:1090,84,0	0/0:15,0:15:45.15:0,45,671	0/0:5,0:5:12.04:0,12,180	0/0:26,0:26:69.23:0,69,1034	0/0:8,0:8:24.06:0,24,323	1/1:0,19:19:57.19:740,57,0	0/0:24,0:24:72.24:0,72,1077	1/1:1,18:19:54.17:697,54,0
chr10	88239889	.	A	ATTT	4097.17	PASS	AB=0.722;AC=49;AF=0.875;AN=56;BaseQRankSum=-2.922;DP=457;FS=1.271;HRun=13;HaplotypeScore=79.4715;InbreedingCoeff=0.0581;MQ=74.06;MQ0=0;MQRankSum=-2.812;QD=8.97;ReadPosRankSum=-1.574;VQSLOD=-0.0335;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:27:31.15:245,31,0	1/1:2,0:6:8.97:68,9,0	0/1:7,0:5:12.23:12,0,28	0/1:11,0:10:27.78:28,0,45	0/1:5,0:15:11.75:82,0,12	1/1:6,0:17:16.03:103,16,0	1/1:6,1:25:28.43:251,28,0	1/1:14,7:26:36.06:476,36,0	1/1:4,0:19:4.98:12,5,0	1/1:7,1:20:32.89:282,33,0	1/1:2,1:20:32.26:262,32,0	1/1:13,0:13:29.04:295,29,0	1/1:6,0:8:1.25:3,1,0	1/1:6,0:18:5:26,5,0	1/1:5,0:20:9.73:58,10,0	0/1:7,0:18:6.44:6,0,22	1/1:6,1:27:17.46:137,17,0	1/1:3,0:16:13.52:98,14,0	0/1:7,0:18:5.71:8,0,6	1/1:2,0:16:18.39:69,18,0	1/1:2,7:9:15.94:270,16,0	1/1:4,1:10:20.88:167,21,0	0/1:4,0:11:7.23:7,0,51	1/1:5,0:22:10.19:41,10,0	1/1:2,0:13:17.28:108,17,0	1/1:2,12:17:43.34:602,43,0	0/1:4,0:15:5.82:6,0,23	1/1:0,10:12:21.07:375,21,0
chr10	88240070	.	GC	G	5137.12	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.075;DP=395;FS=2.055;HRun=2;HaplotypeScore=58.1046;InbreedingCoeff=0.6737;MQ=76.39;MQ0=2;MQRankSum=-2.550;QD=15.47;ReadPosRankSum=3.952;VQSLOD=4.9128;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:32.97:296,33,0	1/1:5,0:5:10.55:82,11,0	0/0:42,0:18:32.50:0,33,271	0/0:21,0:12:22.16:0,22,142	1/1:17,4:21:44.55:350,45,0	1/1:7,0:7:20.99:184,21,0	1/1:7,0:6:6.01:56,6,0	1/1:15,0:15:44.99:390,45,0	1/1:1,7:8:6.01:66,6,0	1/1:25,0:26:52.88:429,53,0	1/1:16,0:17:30.56:186,31,0	1/1:9,0:9:26.91:227,27,0	1/1:9,0:9:18.07:173,18,0	1/1:4,0:5:11.94:95,12,0	1/1:3,9:12:5.55:61,6,0	1/1:12,0:12:26.52:184,27,0	1/1:27,0:27:47.61:322,48,0	1/1:22,1:22:62.86:534,63,0	1/1:19,1:20:49.67:349,50,0	1/1:14,0:14:31.73:215,32,0	1/1:6,0:6:2.96:19,3,0	1/1:10,0:10:20.85:167,21,0	1/1:8,0:8:19.77:145,20,0	1/1:8,1:9:20.58:158,21,0	1/1:15,0:16:11.93:96,12,0	1/1:10,0:10:29.97:253,30,0	1/1:3,0:4:8.99:76,9,0	1/1:9,0:9:3:25,3,0
chr10	88240071	.	CCTT	C	3651.49	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=-2.964;DP=408;FS=10.590;HRun=0;HaplotypeScore=68.5670;InbreedingCoeff=-0.0531;MQ=75.64;MQ0=2;MQRankSum=-0.945;QD=11.34;ReadPosRankSum=3.750;VQSLOD=2.1137;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:23:30.50:432,31,0	0/1:8,0:8:53.91:54,0,110	0/0:41,0:18:35.14:0,35,360	0/0:21,0:12:23.13:0,23,171	0/1:22,0:22:75.88:132,0,76	1/1:7,0:7:19.52:150,20,0	1/1:1,4:5:6:69,6,0	1/1:0,0:15:45.06:486,45,0	0/0:11,0:10:7.90:0,8,54	0/1:26,0:27:99:238,0,159	0/1:18,0:18:34.44:34,0,227	1/1:9,0:10:2.33:191,2,0	0/1:9,0:9:18.08:88,0,18	1/1:3,0:5:11.95:115,12,0	0/0:12,0:12:2.01:0,2,49	0/1:13,0:13:68.95:69,0,155	0/1:28,0:30:38.43:38,0,383	1/1:11,5:22:61.44:541,61,0	0/1:20,0:20:99:132,0,141	0/1:15,0:15:99:114,0,151	1/1:0,0:5:2.96:26,3,0	1/1:0,0:9:18.30:125,18,0	0/1:9,0:9:30.60:61,0,31	0/1:10,0:10:9.77:10,0,88	1/1:1,12:13:11.77:157,12,0	1/1:0,0:10:30.01:314,30,0	0/1:6,0:6:34.39:34,0,48	1/1:0,0:9:3.01:37,3,0
chr10	88241004	.	G	GA	7644.44	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-14.391;DP=587;FS=8.234;HRun=7;HaplotypeScore=52.2154;InbreedingCoeff=0.9994;MQ=81.29;MQ0=0;MQRankSum=-6.376;QD=29.18;ReadPosRankSum=3.287;VQSLOD=5.2150;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:60.18:725,60,0	0/0:15,0:15:42.07:0,42,406	0/0:29,0:29:67.13:0,67,661	0/0:18,0:17:32.15:0,32,393	1/1:5,27:32:75.15:872,75,0	0/0:25,0:25:75.12:0,75,724	0/0:15,0:15:38.99:0,39,359	0/0:27,0:27:49.30:0,49,631	1/1:2,14:16:36.11:435,36,0	0/0:28,0:28:69.11:0,69,666	0/0:13,0:13:39.06:0,39,376	0/0:14,0:14:39.04:0,39,366	1/1:2,20:22:54.16:652,54,0	0/0:19,0:19:57.09:0,57,550	1/1:3,14:17:39.12:471,39,0	1/1:2,21:23:51.16:616,51,0	0/0:15,0:15:42.03:0,42,393	0/0:26,0:26:66.05:0,66,622	1/1:3,15:18:45.13:532,45,0	1/1:3,21:24:60.18:725,60,0	0/0:18,0:18:54.05:0,54,513	0/0:18,0:18:51.08:0,51,492	1/1:3,17:20:22.19:551,22,0	1/1:2,16:18:42.13:507,42,0	1/1:1,16:17:45.14:544,45,0	0/0:31,0:31:78.11:0,78,748	1/1:0,32:32:84.26:1015,84,0	0/0:14,0:14:39.06:0,39,376
chr10	88241370	.	CT	C	3590.53	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=-6.411;DP=478;FS=9.480;HRun=8;HaplotypeScore=74.8427;InbreedingCoeff=0.4170;MQ=74.09;MQ0=2;MQRankSum=1.649;QD=10.09;ReadPosRankSum=5.688;VQSLOD=1.1720;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:15.32:78,15,0	1/1:7,0:7:9.80:24,10,0	0/0:32,0:20:29.40:0,29,215	0/0:16,0:10:9.11:0,9,87	1/1:0,22:22:56.87:505,57,0	1/1:22,0:22:4.06:32,4,0	0/1:10,0:10:9.65:10,0,34	0/0:32,0:32:66.05:0,66,695	1/1:3,11:14:33.05:318,33,0	0/1:19,0:19:16.22:16,0,20	0/1:17,0:17:1.14:34,0,1	0/1:13,0:13:8.98:9,0,37	1/1:1,9:10:21.03:203,21,0	0/1:9,0:9:6.73:7,0,36	1/1:2,14:16:36.06:347,36,0	1/1:3,15:18:27.03:261,27,0	0/1:30,0:29:35.14:35,0,35	0/1:17,0:17:14.23:34,0,14	1/1:2,16:18:47.96:438,48,0	1/1:3,14:17:35.82:294,36,0	0/0:8,0:8:21.04:0,21,237	1/1:3,0:3:2.03:5,2,0	1/1:2,8:10:14.96:133,15,0	1/1:3,8:11:18.02:174,18,0	0/1:19,0:18:1.18:26,0,1	0/0:21,0:21:50.07:0,50,568	1/1:2,23:25:63.10:608,63,0	0/0:13,0:13:30.07:0,30,343
chr10	88241378	.	TA	T	4443.30	PASS	AB=0.990;AC=39;AF=0.696;AN=56;BaseQRankSum=-5.860;DP=447;FS=0.000;HRun=8;HaplotypeScore=67.2222;InbreedingCoeff=0.2358;MQ=69.59;MQ0=2;MQRankSum=0.919;QD=11.51;ReadPosRankSum=5.670;VQSLOD=3.2319;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:66.11:636,66,0	1/1:0,7:7:21.03:202,21,0	0/0:25,0:12:8.53:0,9,80	0/0:15,0:8:10.18:0,10,79	0/1:24,0:24:11.80:12,0,55	1/1:1,20:21:48.08:462,48,0	1/1:2,7:9:15.02:144,15,0	0/1:25,0:25:45.67:46,0,92	1/1:11,0:11:12.76:34,13,0	1/1:1,20:21:60.04:557,60,0	1/1:2,14:16:45.06:430,45,0	1/1:2,6:8:12.01:116,12,0	1/1:9,0:9:8.71:23,9,0	1/1:0,6:6:15.02:144,15,0	0/1:15,0:15:10.22:22,0,10	0/1:18,0:18:7.32:7,0,56	1/1:4,25:28:48.08:463,48,0	1/1:2,16:18:39.06:375,39,0	0/1:21,1:22:25.38:25,0,110	0/1:15,0:15:9.79:29,0,10	0/1:8,0:8:4.43:4,0,37	1/1:0,2:2:6.01:58,6,0	0/0:11,0:11:2.24:0,2,42	0/1:10,0:10:5.25:5,0,35	1/1:1,19:19:51.08:491,51,0	0/1:19,1:20:56.13:82,0,56	1/1:23,0:23:28.97:75,29,0	0/0:10,0:10:23.50:0,24,96
chr10	88243566	.	TATCATC	T	810.06	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=4.593;DP=271;FS=6.450;HRun=0;HaplotypeScore=98.6577;InbreedingCoeff=0.7491;MQ=60.98;MQ0=0;MQRankSum=-3.608;QD=10.95;ReadPosRankSum=-1.780;VQSLOD=1.0692;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:38.40:0,38,635	0/0:6,0:6:17.41:0,17,320	0/0:6,0:4:8.96:0,9,134	0/0:7,0:6:12:0,12,296	0/0:9,0:9:18.22:0,18,373	0/0:9,0:9:14.76:0,15,265	0/0:2,0:2:6.02:0,6,123	1/1:31,0:31:50.98:409,51,0	0/0:9,0:9:12.35:0,12,227	0/0:8,0:8:17.48:0,17,332	0/0:6,0:6:5.77:0,6,91	0/0:3,0:3:9.02:0,9,169	0/0:4,0:4:11.78:0,12,207	0/0:4,0:4:4.71:0,5,118	0/0:6,0:6:7.50:0,8,122	0/0:4,0:4:7.01:0,7,216	0/0:26,0:26:71.56:0,72,1572	0/0:28,0:28:72.50:0,72,1543	0/0:14,0:14:20.32:0,20,471	0/0:2,0:2:6.02:0,6,150	1/1:4,0:4:9.36:33,9,0	./.	0/0:7,0:7:20.97:0,21,362	0/0:2,0:2:5.81:0,6,84	0/0:12,0:12:26.89:0,27,474	1/1:8,5:13:21.29:258,21,0	0/0:9,0:9:19.98:0,20,335	1/1:26,0:26:61.27:261,61,0
chr10	88243571	.	TCA	T	1285.60	PASS	AB=0.926;AC=12;AF=0.222;AN=54;BaseQRankSum=-2.508;DP=264;FS=1.615;HRun=0;HaplotypeScore=73.8902;InbreedingCoeff=0.4116;MQ=58.85;MQ0=0;MQRankSum=-2.051;QD=12.60;ReadPosRankSum=-2.618;VQSLOD=2.7807;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:17.24:0,17,481	0/0:6,0:6:5.82:0,6,233	0/0:5,0:3:9.03:0,9,132	0/0:6,0:5:15.01:0,15,263	0/0:8,0:8:23.61:0,24,302	0/0:7,0:7:3.89:0,4,216	0/0:2,0:2:6.02:0,6,87	1/1:12,15:27:57.92:472,58,0	0/0:7,0:7:8.13:0,8,179	0/1:9,0:9:1.93:2,0,245	0/1:5,0:5:13.48:13,0,76	0/0:3,0:3:9.03:0,9,142	0/0:4,0:4:3.41:0,3,147	0/0:4,0:4:11.54:0,12,134	0/0:5,0:5:14.09:0,14,154	0/0:5,0:5:14.55:0,15,184	0/0:26,0:26:71.33:0,71,1187	0/0:28,0:28:80.80:0,81,1218	0/1:12,0:12:6.65:7,0,345	0/1:3,0:3:1.29:1,0,102	0/1:1,4:5:0.04:99,0,0	./.	0/0:7,0:7:21.05:0,21,309	0/1:2,0:2:1.77:2,0,46	0/0:12,0:12:12.04:0,12,364	1/1:7,6:13:19.60:219,20,0	0/0:13,0:13:19.21:0,19,318	1/1:5,21:26:52.42:620,52,0
chr10	88243574	.	TC	T	827.43	PASS	AB=0.778;AC=8;AF=0.148;AN=54;BaseQRankSum=4.050;DP=253;FS=1.112;HRun=1;HaplotypeScore=68.1831;InbreedingCoeff=0.5697;MQ=58.99;MQ0=0;MQRankSum=-0.675;QD=11.49;ReadPosRankSum=-2.202;VQSLOD=1.1136;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:28.16:0,28,195	0/0:5,0:5:8.59:0,9,70	0/0:4,0:2:6.02:0,6,82	0/0:6,0:5:12.04:0,12,191	0/0:8,0:8:23.50:0,24,142	0/0:7,0:7:13.67:0,14,90	0/0:2,0:2:5.93:0,6,40	1/1:10,15:25:55.02:310,55,0	0/0:7,0:7:14.30:0,14,95	0/0:9,0:9:10.58:0,11,102	0/1:6,0:6:23.61:24,0,37	0/0:3,0:3:8.86:0,9,57	0/0:4,0:4:8.24:0,8,53	0/0:5,0:5:11.71:0,12,74	0/0:5,0:5:11.69:0,12,76	0/0:5,0:5:14.60:0,15,86	0/0:25,0:25:72.17:0,72,465	0/0:29,0:29:57.81:0,58,487	0/0:12,0:12:11.47:0,11,176	0/0:3,0:3:4.22:0,4,37	0/1:1,4:5:1.83:72,0,2	./.	0/0:5,0:5:14.83:0,15,104	0/0:2,0:2:2.89:0,3,18	0/0:10,0:10:17.55:0,18,132	1/1:7,6:13:10.43:140,10,0	0/0:12,0:12:26.62:0,27,170	1/1:2,21:23:45.88:428,46,0
chr10	88244241	.	A	ATG	27889.47	PASS	AB=0.525;AC=51;AF=0.911;AN=56;BaseQRankSum=-8.635;DP=831;FS=8.129;HRun=0;HaplotypeScore=93.9368;InbreedingCoeff=0.8476;MQ=64.25;MQ0=6;MQRankSum=-2.819;QD=36.94;ReadPosRankSum=6.817;VQSLOD=6.8786;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,34:44:73.62:1534,74,0	1/1:6,13:18:39.03:619,39,0	0/0:38,0:26:41.35:0,41,544	0/0:38,0:34:43.47:0,43,872	1/1:6,28:34:69.23:1142,69,0	1/1:2,24:27:54.18:918,54,0	1/1:2,21:23:47.21:815,47,0	1/1:14,25:41:87.21:1309,87,0	1/1:6,27:33:66.23:1122,66,0	1/1:3,31:34:93.30:1525,93,0	1/1:5,21:26:57.19:955,57,0	1/1:2,25:28:63.22:1071,63,0	1/1:0,25:25:57.20:969,57,0	1/1:2,26:28:72.25:1211,72,0	1/1:3,21:25:60.20:1007,60,0	1/1:2,19:21:45.15:765,45,0	1/1:3,27:29:57.19:969,57,0	1/1:4,25:29:72.25:1223,72,0	1/1:10,22:31:66.15:1010,66,0	1/1:6,32:38:90.31:1490,90,0	0/1:3,28:31:2.66:1099,0,3	1/1:3,28:31:72.25:1224,72,0	1/1:3,28:33:75.15:1232,75,0	1/1:1,16:17:42.14:714,42,0	1/1:4,29:34:60.21:1021,60,0	1/1:4,26:30:78.27:1314,78,0	1/1:2,28:29:66.23:1122,66,0	1/1:1,11:12:30.10:510,30,0
chr10	88245029	.	G	GT	4177.98	PASS	AB=0.774;AC=48;AF=0.857;AN=56;BaseQRankSum=-2.260;DP=410;FS=0.819;HRun=11;HaplotypeScore=80.9056;InbreedingCoeff=0.1415;MQ=61.98;MQ0=2;MQRankSum=0.029;QD=10.60;ReadPosRankSum=1.523;VQSLOD=3.2414;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,4:25:57.45:341,57,0	1/1:8,0:8:22.72:131,23,0	0/0:16,0:8:11.78:0,12,82	0/1:11,0:7:18.24:18,0,49	1/1:18,1:31:39.95:290,40,0	1/1:14,0:15:7.38:107,7,0	1/1:5,0:7:8.56:44,9,0	0/1:12,17:28:0.96:505,0,1	1/1:6,0:7:14.58:88,15,0	1/1:18,0:18:45.16:227,45,0	1/1:25,0:24:61.38:364,61,0	1/1:4,0:6:12.45:67,12,0	0/1:4,0:6:16.67:28,0,17	1/1:7,0:8:17.30:98,17,0	1/1:4,0:6:6.03:39,6,0	1/1:4,1:10:20.17:121,20,0	1/1:29,0:29:63.48:356,63,0	1/1:10,0:15:21.03:114,21,0	0/1:13,0:19:1.67:119,0,2	1/1:14,0:24:25.82:145,26,0	1/1:2,7:9:21.04:213,21,0	1/1:9,0:9:14.91:71,15,0	1/1:3,0:14:22.84:119,23,0	1/1:3,1:8:8.52:43,9,0	1/1:1,0:8:17.17:91,17,0	1/1:5,10:16:12.63:279,13,0	0/1:8,0:8:4.91:40,0,5	0/1:7,7:15:5.37:118,0,5
chr10	88245038	.	T	TG	2461.54	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-9.225;DP=429;FS=4.138;HRun=0;HaplotypeScore=76.8443;InbreedingCoeff=0.6266;MQ=59.02;MQ0=8;MQRankSum=7.203;QD=17.97;ReadPosRankSum=5.857;VQSLOD=5.8515;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:48.36:0,48,296	1/1:2,8:9:20.89:257,21,0	0/0:14,0:7:14.93:0,15,160	0/0:12,0:7:12.58:0,13,108	0/0:33,0:32:81.74:0,82,517	0/0:20,0:19:52.52:0,53,384	0/0:7,0:7:16.86:0,17,98	0/1:33,0:32:11.24:11,0,236	0/0:5,0:5:8.86:0,9,53	1/1:0,17:17:51.15:677,51,0	1/1:4,24:26:62.41:823,62,0	0/0:6,0:6:14.05:0,14,66	0/0:7,0:6:13.98:0,14,105	0/0:8,0:8:20.92:0,21,139	0/0:7,0:6:17.73:0,18,129	0/0:11,0:11:25.04:0,25,166	1/1:2,22:24:59.97:838,60,0	0/0:20,0:20:42.17:0,42,263	0/0:21,0:20:49.74:0,50,361	0/0:25,0:24:46.46:0,46,291	0/1:10,0:9:10.22:10,0,35	0/0:12,0:11:26.40:0,26,182	0/0:16,0:14:25.12:0,25,130	0/0:8,0:8:14.68:0,15,101	0/0:12,0:11:29.55:0,30,203	0/1:15,0:15:14.57:15,0,88	0/0:10,0:9:25.86:0,26,193	0/0:12,0:12:5.99:0,6,110
chr10	88245644	.	TAC	T	5109.10	PASS	AB=0.909;AC=37;AF=0.661;AN=56;BaseQRankSum=5.927;DP=567;FS=15.490;HRun=0;HaplotypeScore=109.1613;InbreedingCoeff=0.4227;MQ=81.12;MQ0=0;MQRankSum=-3.550;QD=11.30;ReadPosRankSum=9.667;VQSLOD=2.5603;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:30,1:31:9.33:310,9,0	1/1:13,1:14:10.84:125,11,0	0/0:19,0:19:41.56:0,42,661	0/0:11,0:11:29.69:0,30,455	1/1:16,4:20:33.66:375,34,0	0/1:29,0:29:9.58:323,0,10	1/1:23,0:23:14.99:256,15,0	0/0:30,0:30:86.34:0,86,685	1/1:21,1:22:36.03:273,36,0	0/1:22,3:25:7.30:362,0,7	1/1:10,3:13:3.63:121,4,0	1/1:23,2:25:67.71:405,68,0	1/1:16,0:16:10.37:118,10,0	0/1:15,1:16:6.79:186,0,7	1/1:25,0:25:60.17:298,60,0	1/1:23,0:23:9.65:187,10,0	0/1:16,0:16:51.26:107,0,51	1/1:15,0:15:11.18:130,11,0	1/1:16,0:16:39.73:151,40,0	0/1:22,4:26:39.85:303,0,40	0/0:23,0:24:45.14:0,45,350	1/1:25,1:26:14.33:282,14,0	0/1:14,6:20:12.44:303,0,12	1/1:13,0:13:12.22:96,12,0	0/1:15,2:17:9.11:167,0,9	0/0:15,0:17:16.67:0,17,278	1/1:20,1:21:25.46:231,25,0	0/0:14,0:14:29.66:0,30,200
chr10	88245645	.	ACC	A	13071.92	PASS	AB=0.607;AC=45;AF=0.804;AN=56;BaseQRankSum=-10.214;DP=560;FS=6.622;HRun=9;HaplotypeScore=82.9072;InbreedingCoeff=0.9269;MQ=80.67;MQ0=0;MQRankSum=-2.611;QD=28.17;ReadPosRankSum=3.756;VQSLOD=4.8506;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:31:78.23:907,78,0	1/1:2,12:14:33.10:384,33,0	0/0:18,0:18:29.96:0,30,435	0/0:11,0:11:30.09:0,30,432	1/1:5,15:20:57.16:653,57,0	1/1:3,25:28:75.21:873,75,0	1/1:2,21:23:60.17:699,60,0	0/0:9,0:29:53.03:0,53,214	1/1:2,20:22:60.18:699,60,0	1/1:6,19:25:66.19:763,66,0	1/1:4,8:13:27.01:291,27,0	1/1:2,23:25:72.21:837,72,0	1/1:2,13:15:36.10:419,36,0	1/1:3,12:15:39.11:453,39,0	1/1:1,24:25:66.20:768,66,0	1/1:1,21:22:57.17:664,57,0	1/1:4,12:16:33.09:384,33,0	1/1:1,14:15:36.11:419,36,0	1/1:0,16:16:48.14:559,48,0	1/1:7,18:25:57.15:662,57,0	0/0:3,1:24:13.21:0,13,127	1/1:3,23:26:63.18:733,63,0	1/1:12,9:21:56.73:607,57,0	1/1:1,12:13:24.06:280,24,0	1/1:4,13:17:36.10:419,36,0	0/1:6,1:17:1.82:2,0,73	1/1:1,19:20:51.15:594,51,0	0/0:0,0:14:24.95:0,25,88
chr10	88246161	.	C	CT	18829.19	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-9.626;DP=620;FS=0.535;HRun=5;HaplotypeScore=61.4492;InbreedingCoeff=0.9984;MQ=95.24;MQ0=0;MQRankSum=-11.858;QD=33.68;ReadPosRankSum=6.174;VQSLOD=4.4375;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:60.20:789,60,0	1/1:3,9:12:30.08:380,30,0	0/0:32,0:32:84.04:0,84,859	0/0:29,0:29:72.03:0,72,715	1/1:0,22:22:66.08:825,66,0	1/1:0,23:22:54.18:710,54,0	1/1:4,15:19:42.14:553,42,0	1/1:8,28:36:81.21:1008,81,0	1/1:1,18:19:48.16:632,48,0	1/1:1,22:23:66.20:853,66,0	1/1:3,18:21:51.17:670,51,0	1/1:2,13:15:30.10:395,30,0	1/1:0,17:17:45.08:570,45,0	1/1:3,23:26:60.20:789,60,0	1/1:0,16:16:42.14:553,42,0	1/1:0,20:20:57.19:750,57,0	1/1:0,19:19:45.15:592,45,0	1/1:2,23:25:60.15:770,60,0	1/1:1,18:19:54.16:684,54,0	1/1:1,25:26:75.16:948,75,0	1/1:2,17:19:51.17:671,51,0	1/1:3,20:23:57.19:750,57,0	1/1:0,30:30:78.04:1026,78,0	1/1:0,22:22:66.21:868,66,0	1/1:0,10:10:24.08:316,24,0	1/1:0,28:28:84.24:1072,84,0	1/1:1,25:26:75.24:986,75,0	1/1:1,17:18:51.17:671,51,0
chr10	88248943	.	C	CA	2161.22	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.911;DP=597;FS=7.886;HRun=7;HaplotypeScore=74.3703;InbreedingCoeff=0.9943;MQ=76.38;MQ0=0;MQRankSum=-1.497;QD=25.13;ReadPosRankSum=-2.699;VQSLOD=3.0188;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,107,1019	0/0:10,0:10:30.05:0,30,290	0/0:20,0:20:45:0,45,413	0/0:23,1:22:38.96:0,39,397	0/0:18,0:18:54.09:0,54,521	0/0:17,0:17:45.07:0,45,434	0/0:29,0:29:71.91:0,72,681	1/1:7,22:29:67.41:718,67,0	0/0:15,0:15:36.06:0,36,348	0/0:18,0:18:42.05:0,42,402	0/0:20,0:20:54.08:0,54,521	0/0:17,0:17:45.07:0,45,435	0/0:18,0:18:51.08:0,51,492	0/0:16,0:16:42.07:0,42,406	0/0:26,0:26:66.08:0,66,632	0/0:25,0:25:66.10:0,66,637	0/0:39,0:39:99:0,105,1004	0/0:22,0:22:65.86:0,66,610	0/0:26,0:26:69.11:0,69,666	0/0:16,0:16:45.07:0,45,435	1/1:0,17:19:53.83:600,54,0	0/0:13,0:13:36.05:0,36,343	0/0:15,0:15:39.05:0,39,377	0/0:22,0:22:60.09:0,60,579	0/0:15,0:15:42.06:0,42,406	1/1:3,24:28:75.04:830,75,0	0/0:29,0:29:81.13:0,81,781	1/1:3,7:10:14.20:172,14,0
chr10	88249110	.	T	TAGTC	33454.75	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.982;DP=623;FS=12.406;HRun=0;HaplotypeScore=102.2309;InbreedingCoeff=0.9971;MQ=88.71;MQ0=0;MQRankSum=-12.012;QD=58.90;ReadPosRankSum=5.654;VQSLOD=6.1270;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,51:56:99:3169,120,0	1/1:8,3:11:21.07:562,21,0	0/0:25,0:25:72.18:0,72,1248	0/0:30,0:30:90.28:0,90,1661	1/1:0,22:23:53.94:1186,54,0	1/1:0,17:19:44.95:1060,45,0	1/1:1,19:20:51.11:1259,51,0	1/1:0,21:22:60.12:1457,60,0	1/1:1,16:17:39.13:1087,39,0	1/1:18,0:19:48.10:1035,48,0	1/1:22,0:22:50.99:1029,51,0	1/1:1,20:21:45.15:1201,45,0	1/1:0,19:19:48.03:1204,48,0	1/1:0,19:22:45.15:1204,45,0	1/1:0,16:18:48.16:1294,48,0	1/1:0,22:24:54.19:1507,54,0	1/1:26,0:26:69.10:1608,69,0	1/1:0,10:10:27.02:688,27,0	1/1:2,17:20:54.12:1223,54,0	1/1:1,13:16:38.98:865,39,0	1/1:1,33:34:81.10:2011,81,0	1/1:1,22:26:38.89:842,39,0	1/1:2,20:25:63.14:1544,63,0	1/1:1,18:22:38.84:1027,39,0	1/1:0,15:18:42.14:1126,42,0	1/1:0,21:26:78.22:1920,78,0	1/1:0,18:19:51.18:1424,51,0	1/1:0,13:13:33.11:922,33,0
chr10	88249111	.	A	AGTC	15159.86	PASS	AB=0.949;AC=44;AF=0.786;AN=56;BaseQRankSum=3.263;DP=581;FS=34.433;HRun=0;HaplotypeScore=148.0975;InbreedingCoeff=0.1599;MQ=90.48;MQ0=0;MQRankSum=-5.897;QD=28.82;ReadPosRankSum=11.304;VQSLOD=2.8666;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:54,0:54:85.85:1421,86,0	0/1:3,7:10:2.88:340,0,3	0/0:25,0:25:72.19:0,72,1247	0/0:30,0:30:90.30:0,90,1581	0/1:21,0:21:36.27:483,0,36	0/1:17,0:17:35.57:421,0,36	0/1:19,0:19:5.50:522,0,5	1/1:17,0:17:25.08:494,25,0	1/1:15,0:15:21.15:482,21,0	1/1:9,9:18:8.48:586,8,0	1/1:5,15:21:21.05:573,21,0	1/1:20,0:21:45.15:584,45,0	0/1:18,0:18:5.66:491,0,6	1/1:20,0:20:36.50:531,36,0	1/1:16,0:16:48.16:620,48,0	1/1:22,0:22:53.95:699,54,0	1/1:4,22:26:48.47:1063,48,0	1/1:10,0:10:0.15:284,0,0	0/1:16,0:16:18.53:369,0,19	0/1:16,0:16:57.60:343,0,58	1/1:34,0:34:50.61:921,51,0	0/1:22,0:22:69.25:308,0,69	1/1:22,0:22:36.31:735,36,0	1/1:20,0:20:39.12:492,39,0	1/1:17,0:17:42.14:541,42,0	1/1:25,0:25:30.45:771,30,0	1/1:18,0:18:51.17:660,51,0	1/1:11,0:11:33.11:428,33,0
chr10	88249112	.	A	AG	1032.02	PASS	AB=0.607;AC=5;AF=0.089;AN=56;BaseQRankSum=-3.771;DP=589;FS=0.560;HRun=0;HaplotypeScore=180.9006;InbreedingCoeff=0.3420;MQ=91.19;MQ0=0;MQRankSum=-1.344;QD=13.76;ReadPosRankSum=1.945;VQSLOD=4.2651;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,115,630	0/1:3,7:10:19.29:145,0,19	0/0:26,0:26:69.23:0,69,963	0/0:31,0:31:90.29:0,90,1220	0/0:20,0:20:54.60:0,55,396	0/0:17,0:17:43.36:0,43,304	0/0:19,0:19:46.31:0,46,254	0/0:17,0:17:42.02:0,42,234	0/0:16,0:16:38.35:0,38,187	0/1:8,9:17:43.83:252,0,44	0/1:6,16:22:40.34:224,0,40	0/0:21,0:21:44.34:0,44,226	0/0:18,0:18:41.44:0,41,236	0/0:21,0:21:40.97:0,41,233	0/0:16,0:16:45.91:0,46,245	0/0:22,0:22:48.54:0,49,246	1/1:4,22:26:20.96:534,21,0	0/0:10,0:10:25.66:0,26,160	0/0:16,0:16:45.28:0,45,396	0/0:16,0:16:46.60:0,47,340	0/0:35,0:35:69.32:0,69,399	0/0:22,0:22:39.02:0,39,295	0/0:22,0:22:59.17:0,59,342	0/0:23,0:23:34.77:0,35,172	0/0:18,0:18:42.70:0,43,243	0/0:25,0:25:70.52:0,71,478	0/0:19,0:19:49.30:0,49,236	0/0:11,0:11:31.57:0,32,167
chr10	88249233	.	TACACACACACAC	T	633.53	PASS	AC=16;AF=0.444;AN=36;BaseQRankSum=3.014;DP=426;FS=3.873;HRun=0;HaplotypeScore=128.3840;InbreedingCoeff=0.4827;MQ=66.29;MQ0=14;MQRankSum=-0.657;QD=5.03;ReadPosRankSum=0.421;VQSLOD=1.8523;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:30:14.09:0,14,284	./.	./.	./.	./.	1/1:15,0:15:3:102,3,0	0/0:16,0:14:0.47:0,0,1	0/0:15,0:13:4.83:0,5,19	./.	0/0:10,0:9:3.01:0,3,44	./.	1/1:5,1:6:3.01:102,3,0	./.	1/1:13,0:13:3.01:68,3,0	./.	1/1:10,4:13:6:127,6,0	0/0:23,0:21:6.02:0,6,83	1/1:18,0:17:5.91:81,6,0	0/0:15,0:14:3:0,3,25	./.	0/0:24,0:23:3.88:0,4,132	1/1:12,0:11:3.01:39,3,0	./.	1/1:28,2:28:9.01:140,9,0	0/0:12,0:11:6.01:0,6,68	0/0:13,0:11:4.25:0,4,29	1/1:15,3:17:3:102,3,0	0/0:7,0:7:6:0,6,62
chr10	88250137	.	GC	G	3588.32	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.202;DP=743;FS=4.065;HRun=4;HaplotypeScore=74.9021;InbreedingCoeff=0.9988;MQ=76.26;MQ0=0;MQRankSum=-0.845;QD=30.67;ReadPosRankSum=0.396;VQSLOD=3.9919;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,162,2210	0/0:11,0:11:33.11:0,33,458	0/0:15,0:15:42.14:0,42,580	0/0:20,0:20:53.09:0,53,687	0/0:17,0:17:51.17:0,51,705	0/0:28,0:28:81.24:0,81,1098	0/0:26,0:26:78.25:0,78,1073	1/1:0,23:23:69.19:805,69,0	0/0:35,0:35:99:0,102,1411	0/0:33,0:33:96.27:0,96,1303	0/0:8,0:8:24.08:0,24,333	0/0:32,0:32:96.29:0,96,1310	0/0:21,0:21:60.19:0,60,819	0/0:30,0:30:81.27:0,81,1131	0/0:34,0:34:99:0,99,1385	0/0:21,0:21:63.21:0,63,881	0/0:43,0:42:99:0,126,1730	0/0:23,0:23:69.23:0,69,966	0/0:16,0:16:48.15:0,48,657	0/0:24,0:24:66.18:0,66,898	1/1:3,48:51:99:1403,117,0	0/0:26,0:26:75.25:0,75,1048	0/0:21,0:21:57.14:0,57,760	0/0:39,0:39:99:0,114,1574	0/0:19,0:19:57.19:0,57,797	1/1:4,31:35:57.26:1092,57,0	0/0:24,0:22:69.22:0,69,949	1/1:0,8:8:24.07:288,24,0
chr10	88250580	.	GT	G	13928.26	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.016;DP=618;FS=1.399;HRun=8;HaplotypeScore=64.1846;InbreedingCoeff=0.9869;MQ=83.36;MQ0=0;MQRankSum=-8.234;QD=24.27;ReadPosRankSum=6.283;VQSLOD=4.9908;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,35:36:90.14:869,90,0	1/1:0,8:8:24.04:232,24,0	0/0:22,0:22:47.75:0,48,536	0/0:22,0:22:49.89:0,50,550	1/1:2,23:25:69.11:666,69,0	1/1:4,27:31:75.12:724,75,0	1/1:0,14:14:42.07:406,42,0	1/1:4,31:35:93.08:881,93,0	1/1:3,33:36:84.13:811,84,0	1/1:2,28:30:84.12:806,84,0	1/1:0,16:16:45.07:435,45,0	1/1:2,10:12:27.04:261,27,0	1/1:0,27:27:72.12:695,72,0	1/1:1,26:27:72.12:695,72,0	1/1:4,18:22:54.08:521,54,0	1/1:1,18:19:45.07:435,45,0	1/1:2,18:20:48.08:463,48,0	1/1:5,25:30:63.05:598,63,0	1/1:5,15:20:30.05:416,30,0	1/1:1,11:12:33.05:318,33,0	1/1:1,15:16:36.06:348,36,0	1/1:1,25:26:72.11:695,72,0	1/1:1,14:15:42.07:406,42,0	1/1:1,16:17:14.58:349,15,0	1/1:1,22:23:63.10:608,63,0	1/1:3,15:18:45.04:423,45,0	1/1:4,27:31:69.10:666,69,0	1/1:0,8:8:21.03:203,21,0
chr10	88250943	.	T	TTGGAGATAA	8659.79	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-3.007;DP=714;FS=0.000;HRun=0;HaplotypeScore=192.9119;InbreedingCoeff=0.9978;MQ=84.54;MQ0=0;MQRankSum=-11.255;QD=93.12;ReadPosRankSum=-3.223;VQSLOD=4.3374;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,141,3996	0/0:14,0:14:36.10:0,36,1033	0/0:25,0:24:62.33:0,62,1754	0/0:29,0:31:54.52:0,55,1612	0/0:16,0:16:45.12:0,45,1175	0/0:25,0:25:69.24:0,69,2091	0/0:31,0:31:90.28:0,90,2577	1/1:18,11:30:81.26:2990,81,0	0/0:22,0:22:66.19:0,66,1856	0/0:16,0:16:39.13:0,39,1141	0/0:26,0:26:69.24:0,69,2074	0/0:33,0:33:93.32:0,93,2710	0/0:27,0:27:81.26:0,81,2414	0/0:26,0:26:78.22:0,78,2070	0/0:23,0:23:60.19:0,60,1739	0/0:23,0:23:69.24:0,69,2020	0/0:39,0:39:99:0,108,2993	0/0:37,0:37:99:0,102,2901	0/0:19,0:19:48.16:0,48,1355	0/0:14,0:14:42.14:0,42,1273	1/1:3,15:20:36.10:1635,36,0	0/0:28,0:28:81.28:0,81,2347	0/0:23,0:23:63.22:0,63,1801	0/0:25,0:25:75.25:0,75,2206	0/0:24,0:24:69.20:0,69,1958	1/1:8,18:26:21.57:3023,22,0	0/0:23,0:22:66.23:0,66,2022	1/1:3,11:16:21.07:1011,21,0
chr10	88251226	.	G	GA	4227.42	PASS	AB=0.531;AC=7;AF=0.125;AN=56;BaseQRankSum=-12.675;DP=690;FS=3.543;HRun=1;HaplotypeScore=63.3262;InbreedingCoeff=0.9092;MQ=91.66;MQ0=0;MQRankSum=-1.541;QD=37.74;ReadPosRankSum=-1.326;VQSLOD=4.7591;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.24:0,90,1134	0/0:12,0:12:36.12:0,36,467	0/0:30,0:30:87.20:0,87,1046	0/0:29,0:29:78.17:0,78,916	0/0:24,0:24:72.23:0,72,934	0/0:28,0:27:81.25:0,81,1035	0/0:30,0:30:87.27:0,87,1114	1/1:2,37:39:99:1512,108,0	0/0:16,0:16:48.15:0,48,611	0/0:29,0:29:87.28:0,87,1118	0/0:21,0:21:60.18:0,60,761	0/0:28,0:28:84.25:0,84,1061	0/0:27,0:27:78.22:0,78,980	0/0:16,0:16:45.13:0,45,570	0/0:22,0:22:66.19:0,66,829	0/0:16,0:16:48.13:0,48,606	0/0:37,0:37:99:0,99,1255	0/0:21,0:21:60.20:0,60,778	0/0:17,0:17:51.15:0,51,636	0/0:26,0:26:75.22:0,75,944	1/1:1,31:33:81.27:1197,81,0	0/0:29,0:29:84.26:0,84,1074	0/0:23,0:23:69.21:0,69,873	0/0:20,0:20:60.17:0,60,762	0/0:15,0:15:42.13:0,42,533	0/1:3,23:26:1.47:935,0,1	0/0:32,0:32:96.30:0,96,1227	1/1:1,13:14:39.13:584,39,0
chr10	88252997	.	G	GCC	2971.52	PASS	AB=0.538;AC=7;AF=0.125;AN=56;BaseQRankSum=5.478;DP=525;FS=1.043;HRun=6;HaplotypeScore=65.0779;InbreedingCoeff=0.8364;MQ=88.78;MQ0=0;MQRankSum=-3.478;QD=36.69;ReadPosRankSum=-2.897;VQSLOD=2.8655;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:54.16:0,54,659	0/0:7,0:7:21.05:0,21,244	0/0:23,0:23:60.66:0,61,705	0/0:18,0:18:41.70:0,42,435	0/0:27,0:27:78.24:0,78,951	0/0:20,0:20:57.18:0,57,694	0/0:18,0:18:51.16:0,51,622	1/1:7,25:33:75.26:1253,75,0	0/0:15,0:15:42.12:0,42,500	0/0:29,0:29:81.25:0,81,980	0/0:16,0:16:45.14:0,45,548	0/0:12,0:12:24.06:0,24,293	0/0:11,0:11:30.08:0,30,353	0/0:16,0:16:48.15:0,48,583	0/0:23,0:23:66.19:0,66,793	0/0:11,0:11:30.08:0,30,354	0/0:26,0:26:75.19:0,75,887	0/0:15,0:15:42.13:0,42,512	0/0:15,0:15:42.11:0,42,499	0/0:27,0:27:72.21:0,72,865	1/1:0,8:8:18.06:304,18,0	0/0:14,0:14:39.12:0,39,476	0/0:18,0:18:48.14:0,48,574	0/0:17,0:17:48.15:0,48,585	0/0:19,0:19:57.18:0,57,695	0/1:3,18:21:16.02:802,0,16	0/0:25,0:24:72.23:0,72,877	1/1:1,18:19:45.15:761,45,0
chr10	88254358	.	G	GA	7605.74	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=-11.874;DP=489;FS=7.302;HRun=9;HaplotypeScore=48.4138;InbreedingCoeff=0.9030;MQ=71.47;MQ0=0;MQRankSum=-0.390;QD=23.33;ReadPosRankSum=0.351;VQSLOD=5.4974;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,11:17:27.07:299,27,0	0/0:6,0:6:15:0,15,130	0/1:13,0:11:1.32:1,0,112	0/1:12,0:12:2.52:3,0,110	1/1:7,17:24:48.13:531,48,0	0/0:24,0:24:65.95:0,66,566	0/0:14,0:14:41.98:0,42,362	1/1:4,16:20:48.13:531,48,0	1/1:1,11:12:27.07:299,27,0	0/0:23,0:23:59.98:0,60,521	0/0:19,0:19:53.99:0,54,469	0/0:11,0:11:29.99:0,30,260	1/1:0,11:11:27.07:299,27,0	0/0:18,0:18:47.97:0,48,412	1/1:1,9:10:27.07:299,27,0	1/1:2,11:13:36.10:398,36,0	0/0:12,0:12:35.97:0,36,307	0/0:13,0:13:38.87:0,39,324	1/1:4,12:16:18.90:418,19,0	1/1:5,27:32:75.16:816,75,0	1/1:1,18:19:48.13:531,48,0	0/0:22,1:23:26.79:0,27,462	1/1:6,17:23:22.10:472,22,0	1/1:0,8:7:15.04:166,15,0	1/1:0,19:19:57.15:631,57,0	1/1:7,14:21:42.11:464,42,0	1/1:4,33:37:87.13:945,87,0	1/1:3,16:19:25.08:505,25,0
chr10	88255060	.	TGTTCTGCTTGCCCTGGAAGAC	T	15933.64	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.502;DP=584;FS=13.350;HRun=0;HaplotypeScore=319.6955;InbreedingCoeff=0.9740;MQ=90.38;MQ0=0;MQRankSum=-13.255;QD=100.85;ReadPosRankSum=4.028;VQSLOD=3.4613;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,166,15274	0/0:10,0:10:30.10:0,30,2572	0/0:20,0:20:54.15:0,54,3375	0/0:29,0:29:78.22:0,78,4395	1/1:1,13:14:27.09:683,27,0	0/0:17,0:17:51.16:0,51,4394	0/0:27,0:27:81.26:0,81,7035	0/0:31,0:31:84.27:0,84,6354	1/1:3,17:20:45.15:2592,45,0	0/0:16,0:16:48.16:0,48,4133	0/0:14,0:14:36.11:0,36,2891	0/0:26,0:26:78.25:0,78,6869	1/1:4,11:15:21.07:1230,21,0	0/0:22,0:22:66.23:0,66,5563	1/1:0,14:14:33.11:1933,33,0	1/1:1,21:22:48.16:2732,48,0	0/0:33,0:33:99:0,99,9412	0/0:34,0:34:99:0,99,8643	1/1:3,12:15:36.09:1296,36,0	1/1:1,5:6:12.01:548,12,0	0/0:44,0:44:99:0,129,10603	0/0:15,0:15:45.15:0,45,3888	1/1:2,4:6:6.02:351,6,0	1/1:3,12:15:20.92:1230,21,0	1/1:1,6:7:12.04:703,12,0	0/0:26,0:26:78.26:0,78,7448	1/1:2,22:24:45.15:2636,45,0	0/0:7,0:7:21.05:0,21,1825
chr10	88255518	.	G	GCACACACA	2394.89	PASS	AB=0.835;AC=37;AF=0.740;AN=50;BaseQRankSum=-1.227;DP=532;FS=1.585;HRun=0;HaplotypeScore=125.7183;InbreedingCoeff=0.2613;MQ=62.56;MQ0=12;MQRankSum=-2.037;QD=6.44;ReadPosRankSum=-3.656;VQSLOD=1.5254;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:32:43.17:43,0,456	0/0:8,0:10:23.32:0,23,354	./.	./.	0/1:3,1:11:14.96:177,0,15	./.	1/1:24,0:23:18.49:219,18,0	1/1:21,0:20:10.98:50,11,0	1/1:6,9:19:2.82:122,3,0	0/0:13,0:12:16.81:0,17,168	0/1:10,0:14:24.22:24,0,132	1/1:17,0:17:5.88:50,6,0	1/1:7,0:7:5.96:45,6,0	1/1:17,0:16:9.03:263,9,0	1/1:5,9:17:3.01:122,3,0	1/1:4,10:19:4.26:125,4,0	0/0:34,0:35:44.43:0,44,799	1/1:16,0:16:4.83:111,5,0	1/1:18,0:17:16.31:183,16,0	1/1:6,4:12:3.01:122,3,0	1/1:31,0:31:5.72:24,6,0	0/0:21,0:21:3.01:0,3,75	1/1:14,0:14:16.99:286,17,0	1/1:31,0:30:20.94:166,21,0	0/1:4,0:10:30.77:42,0,31	1/1:17,0:17:14.54:109,15,0	1/1:12,0:12:14.93:249,15,0	0/1:10,0:10:23.90:24,0,105
chr10	88255559	.	C	CGT	1867.16	PASS	AB=0.600;AC=16;AF=0.286;AN=56;BaseQRankSum=-2.055;DP=553;FS=2.146;HRun=0;HaplotypeScore=80.1008;InbreedingCoeff=0.6715;MQ=66.44;MQ0=9;MQRankSum=1.326;QD=9.02;ReadPosRankSum=1.037;VQSLOD=3.3379;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:75.38:0,75,1018	0/0:13,0:13:36.10:0,36,497	0/0:28,0:18:51.08:0,51,693	0/0:20,0:11:33.04:0,33,385	0/0:20,0:20:28.08:0,28,420	1/1:0,0:23:2.74:12,3,0	0/1:11,18:28:46.49:46,0,84	1/1:4,19:25:52.81:873,53,0	0/0:16,0:16:23.57:0,24,301	0/0:17,0:17:47.57:0,48,602	0/0:20,0:20:51.13:0,51,700	0/0:4,12:17:6.02:0,6,78	0/0:5,0:5:8.69:0,9,83	1/1:2,0:22:9.50:123,10,0	0/0:15,0:14:14.54:0,15,180	0/0:14,0:14:13.86:0,14,181	0/0:30,0:30:84.27:0,84,1181	1/1:1,0:24:6.02:81,6,0	0/0:17,0:17:47.97:0,48,611	0/0:10,0:10:10.72:0,11,245	1/1:4,0:30:9.02:128,9,0	1/1:5,0:22:2.64:16,3,0	0/0:21,0:21:39.76:0,40,481	0/0:23,0:23:42.14:0,42,575	0/0:10,0:10:12.51:0,13,176	0/1:4,7:14:17.25:354,0,17	0/0:13,0:13:12.02:0,12,104	1/1:0,13:16:24.08:412,24,0
chr10	88256367	.	AAAAAC	A	3551.84	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=2.473;DP=541;FS=2.903;HRun=0;HaplotypeScore=134.7404;InbreedingCoeff=0.9703;MQ=66.69;MQ0=0;MQRankSum=-4.673;QD=38.61;ReadPosRankSum=0.695;VQSLOD=3.8737;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:72.25:0,72,1902	0/0:12,0:12:33.11:0,33,949	0/0:23,0:21:30.57:0,31,694	0/0:21,0:20:8.53:0,9,869	0/0:28,0:28:54.18:0,54,1358	1/1:8,7:15:42.09:695,42,0	1/1:9,6:15:27.09:494,27,0	0/0:11,0:11:13.81:0,14,112	0/0:16,0:16:45.15:0,45,1253	0/0:37,0:37:93.32:0,93,2590	0/0:17,0:17:45.15:0,45,1249	1/1:6,7:13:27.05:428,27,0	0/0:10,0:10:24.08:0,24,653	1/1:0,11:11:30.10:564,30,0	0/0:22,0:22:51.17:0,51,1336	0/0:10,0:10:27.09:0,27,757	0/0:24,0:24:53.91:0,54,1341	1/1:8,7:15:16.29:535,16,0	0/0:19,0:19:48.15:0,48,1180	0/0:31,0:31:75.26:0,75,2054	0/0:11,0:11:11.21:0,11,91	1/1:10,13:23:51.04:835,51,0	0/0:21,0:21:39.12:0,39,954	0/0:19,0:19:39.09:0,39,972	0/0:30,0:30:84.28:0,84,2216	0/0:31,0:31:69.03:0,69,323	0/0:16,0:16:39.13:0,39,1089	0/0:8,0:8:18.17:0,18,68
chr10	88256384	.	AAAC	A	2571.88	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=8.681;DP=527;FS=8.188;HRun=0;HaplotypeScore=131.3516;InbreedingCoeff=0.4255;MQ=61.91;MQ0=0;MQRankSum=-7.648;QD=18.11;ReadPosRankSum=1.748;VQSLOD=2.6387;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:75.23:0,75,1497	0/0:12,0:12:36.12:0,36,698	0/0:26,0:22:42.59:0,43,707	0/0:27,0:24:26.43:0,26,698	0/0:28,0:28:72.23:0,72,1322	0/1:12,0:17:86.88:105,0,87	0/1:8,0:10:18.85:86,0,19	1/1:2,7:9:21.07:323,21,0	0/0:16,0:16:48.13:0,48,904	0/0:37,0:37:99:0,108,2168	0/0:19,0:19:54.18:0,54,1090	0/1:11,0:13:49.09:49,0,82	0/0:14,0:14:39.11:0,39,678	0/1:12,0:12:13.04:93,0,13	0/0:17,0:17:51.16:0,51,1050	0/0:13,0:13:39.10:0,39,663	0/0:20,0:20:9.82:0,10,953	0/1:10,0:13:41.92:86,0,42	0/0:19,0:18:51.16:0,51,959	0/0:29,0:29:84.27:0,84,1668	1/1:3,5:8:17.97:220,18,0	0/1:17,0:19:99:121,0,101	0/0:13,0:13:33.09:0,33,663	0/0:15,0:15:33.10:0,33,615	0/0:33,0:33:96.31:0,96,1888	1/1:5,28:33:90.29:1343,90,0	0/0:18,0:18:54.13:0,54,924	1/1:1,7:8:21.07:324,21,0
chr10	88256409	.	CA	C	5734.11	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=10.933;DP=549;FS=3.826;HRun=9;HaplotypeScore=122.4622;InbreedingCoeff=0.9162;MQ=66.07;MQ0=1;MQRankSum=-9.542;QD=14.82;ReadPosRankSum=1.700;VQSLOD=4.4257;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:81.21:0,81,912	0/0:11,0:11:33.10:0,33,381	0/0:46,0:36:32.44:0,32,488	0/1:34,0:25:0.35:0,0,234	1/1:2,20:23:68.07:609,68,0	1/1:0,0:10:20.37:60,20,0	1/1:1,0:7:12.40:37,12,0	1/1:1,0:22:37.61:109,38,0	1/1:7,9:16:38.92:340,39,0	0/0:43,0:43:99:0,111,1255	0/0:15,0:16:44.95:0,45,481	1/1:3,0:12:13.21:47,13,0	1/1:2,13:15:42.01:379,42,0	1/1:3,0:9:12.22:36,12,0	1/1:5,17:22:56.98:511,57,0	1/1:1,11:12:33.02:301,33,0	0/0:18,0:18:48.06:0,48,524	1/1:0,0:11:22.41:67,22,0	1/1:8,10:18:10.46:341,10,0	1/1:9,21:30:81.01:728,81,0	1/1:3,0:13:16.29:48,16,0	1/1:1,0:12:22.41:66,22,0	1/1:1,16:18:50.04:440,50,0	1/1:2,4:6:11.93:99,12,0	1/1:6,31:37:93.04:851,93,0	1/1:2,0:34:63.15:186,63,0	1/1:3,13:16:45.02:411,45,0	1/1:1,0:10:21.17:68,21,0
chr10	88256443	.	C	CAA	9743.76	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=2.116;DP=519;FS=2.704;HRun=8;HaplotypeScore=103.3979;InbreedingCoeff=0.9804;MQ=63.10;MQ0=2;MQRankSum=-6.916;QD=34.55;ReadPosRankSum=1.740;VQSLOD=4.6506;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:66.17:0,66,735	0/0:7,0:7:18.03:0,18,191	0/0:39,0:25:37.92:0,38,331	0/0:25,0:17:13.60:0,14,224	1/1:6,17:23:55.43:831,55,0	1/1:3,11:15:28.68:498,29,0	1/1:1,10:12:24.07:358,24,0	0/0:28,0:28:69.15:0,69,750	1/1:4,11:16:35.57:487,36,0	0/0:25,0:25:60.15:0,60,668	0/0:14,0:14:39.10:0,39,434	1/1:6,9:15:42.10:617,42,0	1/1:3,10:13:27.09:428,27,0	1/1:4,1:5:12.01:138,12,0	1/1:3,16:19:39.13:619,39,0	1/1:1,13:14:30.10:476,30,0	0/0:18,0:18:48.11:0,48,524	1/1:4,12:16:30.10:476,30,0	1/1:19,5:21:57.19:804,57,0	1/1:5,17:23:59.60:834,60,0	0/0:13,0:13:30.08:0,30,334	1/1:3,6:10:18.06:267,18,0	1/1:7,13:21:51.41:743,51,0	1/1:1,3:4:9.03:143,9,0	1/1:6,25:32:87.29:1353,87,0	0/0:31,0:31:75.14:0,75,813	1/1:3,16:20:44.64:675,45,0	0/0:11,0:11:21.03:0,21,234
chr10	88256722	.	G	GA	4047.69	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-8.060;DP=482;FS=8.956;HRun=11;HaplotypeScore=67.8621;InbreedingCoeff=0.8013;MQ=65.99;MQ0=0;MQRankSum=0.845;QD=19.00;ReadPosRankSum=-1.668;VQSLOD=3.9181;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:98.53:0,99,764	0/0:7,0:7:20.92:0,21,162	0/1:9,0:11:6.47:6,0,78	0/0:11,0:11:8.61:0,9,69	1/1:2,20:23:46.17:444,46,0	0/0:2,0:10:2.62:0,3,21	0/0:2,0:16:20.72:0,21,65	0/0:24,0:24:40.31:0,40,305	1/1:5,7:12:6.86:238,7,0	0/0:20,0:20:50.79:0,51,394	0/0:14,0:14:29.84:0,30,232	0/0:1,0:13:16.29:0,16,47	1/1:0,8:8:18.03:183,18,0	0/0:2,0:20:30.54:0,31,88	1/1:1,19:21:44.92:441,45,0	1/1:3,11:14:36.06:360,36,0	0/0:19,0:19:49.83:0,50,377	0/0:3,0:17:19.84:0,20,63	1/1:4,15:22:33.60:472,34,0	1/1:2,22:24:57.01:546,57,0	0/0:13,0:13:23.84:0,24,183	0/0:3,0:14:14.87:0,15,51	1/1:5,14:20:3.65:205,4,0	1/1:5,21:27:62.96:623,63,0	1/1:2,13:15:13.72:313,14,0	0/0:17,0:17:29.84:0,30,232	1/1:6,10:16:2.80:217,3,0	0/0:11,1:13:1.04:0,1,218
chr10	88256936	.	C	CT	1067.54	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.373;DP=557;FS=5.134;HRun=3;HaplotypeScore=118.9063;InbreedingCoeff=0.9707;MQ=59.35;MQ0=8;MQRankSum=-9.203;QD=12.56;ReadPosRankSum=-1.513;VQSLOD=1.7979;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:93.26:0,93,1136	0/0:5,0:5:15.05:0,15,186	0/0:23,0:15:35.46:0,35,458	0/0:16,0:15:20.78:0,21,350	0/0:34,0:32:87.27:0,87,1080	1/1:20,2:21:47.92:339,48,0	1/1:10,0:9:23.43:153,23,0	0/0:26,0:26:69.21:0,69,840	0/0:19,0:18:48.13:0,48,580	0/0:24,0:24:69.21:0,69,846	0/0:18,0:18:48.14:0,48,582	1/1:14,1:14:36.11:215,36,0	0/0:13,0:13:33.10:0,33,406	1/1:16,2:17:42.46:260,42,0	0/0:15,0:15:39.12:0,39,484	0/0:14,0:14:39.12:0,39,481	0/0:30,0:30:87.27:0,87,1077	0/0:13,0:12:5.98:0,6,19	0/0:22,0:21:59.29:0,59,691	0/0:29,0:27:71.03:0,71,859	0/0:12,0:12:30.09:0,30,361	1/1:19,1:19:35.82:276,36,0	0/0:24,0:23:60.19:0,60,735	0/0:23,0:23:52.67:0,53,592	0/0:21,0:21:57.18:0,57,697	0/0:17,0:17:48.14:0,48,584	0/0:23,0:23:57.18:0,57,706	0/0:12,0:12:36.11:0,36,446
chr10	88256937	.	TTC	T	1558.03	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=13.013;DP=554;FS=6.542;HRun=0;HaplotypeScore=125.7614;InbreedingCoeff=0.8857;MQ=58.32;MQ0=9;MQRankSum=-10.976;QD=16.57;ReadPosRankSum=-0.636;VQSLOD=2.9651;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:99:0,102,1908	0/0:5,0:5:15.05:0,15,304	0/0:22,0:14:24.10:0,24,738	0/0:16,0:15:31.77:0,32,605	0/0:34,0:32:87.30:0,87,1764	1/1:19,2:20:35.68:392,36,0	0/1:10,0:9:11.20:106,0,11	0/0:25,0:25:72.25:0,72,1427	0/0:19,0:18:48.16:0,48,935	0/0:25,0:25:75.25:0,75,1453	0/0:18,0:18:54.18:0,54,1040	1/1:13,1:13:36.60:291,37,0	0/0:13,0:13:33.11:0,33,645	1/1:17,0:16:40.03:337,40,0	0/0:15,0:15:42.14:0,42,827	0/0:14,0:14:39.13:0,39,724	0/0:31,0:31:93.32:0,93,1842	1/1:12,0:11:13.04:244,13,0	0/0:22,0:21:60.19:0,60,1127	0/0:30,0:28:66.16:0,66,1393	0/0:11,0:11:33.10:0,33,633	1/1:18,2:19:34.11:365,34,0	0/0:23,0:22:60.18:0,60,1136	0/0:23,0:23:42.18:0,42,986	0/0:22,0:22:63.17:0,63,1194	0/0:17,0:17:51.17:0,51,997	0/0:23,0:23:57.20:0,57,1157	0/0:12,0:12:36.12:0,36,731
chr10	88256938	.	TCC	T	3137.61	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.911;DP=551;FS=7.228;HRun=2;HaplotypeScore=119.2389;InbreedingCoeff=0.9888;MQ=57.15;MQ0=10;MQRankSum=-10.995;QD=33.74;ReadPosRankSum=-1.142;VQSLOD=3.0208;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:93.25:0,93,1812	0/0:5,0:5:15.05:0,15,299	0/0:22,0:14:19.12:0,19,725	0/0:16,0:14:13.53:0,14,542	0/0:34,0:32:87.30:0,87,1734	1/1:6,15:20:57.12:740,57,0	1/1:2,8:9:18.06:250,18,0	0/0:25,0:25:72.25:0,72,1399	0/0:19,0:18:48.15:0,48,922	0/0:24,0:24:72.24:0,72,1404	0/0:17,0:17:51.18:0,51,1013	1/1:2,12:13:39.12:528,39,0	0/0:14,0:14:33.11:0,33,635	1/1:3,14:16:45.14:618,45,0	0/0:15,0:15:42.14:0,42,828	0/0:14,0:14:39.13:0,39,714	0/0:31,0:31:93.32:0,93,1844	1/1:1,10:10:30.10:481,30,0	0/0:23,0:22:63.14:0,63,1146	0/0:29,0:27:63.16:0,63,1345	0/0:10,0:10:30.10:0,30,591	1/1:7,13:19:50.40:708,50,0	0/0:23,0:22:60.18:0,60,1120	0/0:23,0:23:25.47:0,25,933	0/0:22,0:22:63.22:0,63,1210	0/0:17,0:17:51.17:0,51,980	0/0:24,0:24:57.20:0,57,1138	0/0:12,0:12:36.12:0,36,718
chr10	88256939	.	C	CT	1288.24	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=12.241;DP=556;FS=6.884;HRun=2;HaplotypeScore=117.9471;InbreedingCoeff=0.7788;MQ=56.94;MQ0=10;MQRankSum=-10.392;QD=12.88;ReadPosRankSum=-1.165;VQSLOD=1.9352;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:93.29:0,93,1281	0/0:5,0:5:15.05:0,15,210	0/0:22,0:14:27.47:0,27,515	0/1:16,0:14:13.86:14,0,344	0/0:34,0:32:87.29:0,87,1218	1/1:19,2:20:53.25:403,53,0	0/1:11,0:10:6.13:93,0,6	0/0:25,0:25:72.23:0,72,983	0/0:20,0:19:48.15:0,48,656	0/0:25,0:25:69.23:0,69,963	0/0:17,0:17:51.17:0,51,713	1/1:14,0:13:38:262,38,0	0/0:14,0:14:33.11:0,33,462	1/1:15,2:16:43.54:321,44,0	0/0:15,0:15:42.14:0,42,581	0/0:14,0:14:39.13:0,39,543	0/0:31,0:31:93.31:0,93,1297	0/0:11,0:10:12.59:0,13,40	0/0:23,0:22:62.95:0,63,812	0/0:30,0:28:71.05:0,71,967	0/0:10,0:10:30.09:0,30,402	1/1:20,1:20:50.08:364,50,0	0/0:23,0:22:60.20:0,60,832	0/0:23,0:23:52.89:0,53,670	0/0:23,0:23:63.17:0,63,852	0/0:16,0:16:48.16:0,48,668	0/0:24,0:24:57.19:0,57,797	0/0:12,0:12:36.12:0,36,503
chr10	88256969	.	TTC	T	2267.82	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=12.703;DP=518;FS=3.215;HRun=0;HaplotypeScore=144.4059;InbreedingCoeff=0.9768;MQ=48.80;MQ0=8;MQRankSum=-10.122;QD=28.00;ReadPosRankSum=2.326;VQSLOD=5.1210;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:98.13:0,98,1618	0/0:5,0:5:15.05:0,15,300	./.	./.	0/0:30,0:28:71.40:0,71,1269	1/1:2,14:19:42.07:629,42,0	1/1:1,3:5:9.03:141,9,0	0/0:14,0:14:33.58:0,34,649	0/0:19,0:18:39.13:0,39,754	0/0:30,0:30:90.30:0,90,1783	0/0:17,0:17:51.18:0,51,1032	1/1:4,7:14:25.33:415,25,0	0/0:15,0:15:19.41:0,19,334	1/1:2,12:16:36.05:531,36,0	0/0:20,0:20:53.51:0,54,740	0/0:18,0:18:22.35:0,22,485	0/0:34,0:33:97.55:0,98,1882	1/1:2,4:7:14.98:193,15,0	0/0:23,0:23:26.42:0,26,877	0/0:26,0:24:50.15:0,50,981	0/0:6,0:6:18.06:0,18,365	1/1:3,14:19:36.09:540,36,0	0/0:27,0:25:38.97:0,39,787	0/0:25,0:25:33.50:0,33,656	0/0:26,0:26:72.55:0,73,1148	0/0:12,0:12:36.12:0,36,731	0/0:32,0:32:46.69:0,47,972	0/0:12,0:10:30.10:0,30,591
chr10	88256970	.	TCCTC	T	1683.97	PASS	AB=0.813;AC=11;AF=0.212;AN=52;BaseQRankSum=2.760;DP=512;FS=11.663;HRun=0;HaplotypeScore=162.0300;InbreedingCoeff=-0.2809;MQ=48.81;MQ0=8;MQRankSum=-2.759;QD=6.10;ReadPosRankSum=-4.282;VQSLOD=0.7936;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:39:99:140,0,1403	0/0:5,0:5:15.05:0,15,250	./.	./.	0/1:23,7:28:99:107,0,888	0/0:19,0:19:30.60:0,31,132	0/0:5,0:5:7.04:0,7,24	0/0:14,0:14:32.04:0,32,452	0/0:15,4:18:32.70:0,33,573	0/0:30,0:30:90.31:0,90,2028	0/0:17,0:17:51.17:0,51,1215	0/0:14,0:14:12.56:0,13,74	0/1:6,8:14:82.61:83,0,171	0/0:16,0:16:28.29:0,28,130	0/1:20,0:20:99:321,0,447	0/1:8,9:17:99:157,0,357	0/0:34,0:33:93.56:0,94,2048	0/0:8,0:7:4.95:0,5,21	0/1:15,7:22:99:285,0,634	0/1:18,7:23:98.16:98,0,678	0/0:6,0:6:18.06:0,18,278	0/0:19,0:19:21.64:0,22,98	0/1:14,13:25:99:210,0,652	0/1:21,2:23:99:277,0,364	0/1:26,0:26:99:138,0,996	0/0:12,0:12:36.12:0,36,617	0/1:19,13:32:11.37:11,0,828	0/0:12,0:10:30.07:0,30,460
chr10	88256971	.	C	CT	1044.34	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=11.512;DP=513;FS=5.152;HRun=2;HaplotypeScore=141.6254;InbreedingCoeff=0.9692;MQ=48.67;MQ0=8;MQRankSum=-9.357;QD=12.43;ReadPosRankSum=1.374;VQSLOD=2.5682;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:76.63:0,77,1149	0/0:5,0:5:15.05:0,15,210	./.	./.	0/0:29,0:27:71.38:0,71,895	1/1:16,3:19:37.30:310,37,0	1/1:4,1:5:8.89:66,9,0	0/0:14,0:14:32.46:0,32,429	0/0:19,0:18:39.12:0,39,516	0/0:30,0:30:90.30:0,90,1242	0/0:17,0:17:51.17:0,51,711	1/1:13,3:16:24.95:223,25,0	0/0:14,0:14:20.24:0,20,229	1/1:15,2:17:35.13:299,35,0	0/0:20,0:20:53.22:0,53,520	0/0:17,0:17:30.74:0,31,344	0/0:34,0:33:96.25:0,96,1317	1/1:6,2:7:9.31:66,9,0	0/0:22,0:22:53.64:0,54,650	0/0:25,0:23:52.75:0,53,675	0/0:6,0:6:18.06:0,18,252	1/1:17,2:19:32.14:257,32,0	0/0:27,0:25:50.90:0,51,582	0/0:23,0:23:47.18:0,47,484	0/0:26,0:26:72.50:0,72,816	0/0:12,0:12:36.12:0,36,501	0/0:32,0:32:50.32:0,50,677	0/0:12,0:10:30.10:0,30,411
chr10	88257006	.	TTCTC	T	2255.24	PASS	AB=0.944;AC=26;AF=0.481;AN=54;BaseQRankSum=10.602;DP=479;FS=1.293;HRun=0;HaplotypeScore=136.2022;InbreedingCoeff=0.1852;MQ=48.49;MQ0=5;MQRankSum=-8.617;QD=7.30;ReadPosRankSum=-3.731;VQSLOD=1.9021;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:27.88:0,28,648	0/0:7,0:7:21.03:0,21,331	0/0:5,0:4:8.99:0,9,80	0/0:3,0:2:5.96:0,6,45	0/1:26,2:26:99:121,0,367	1/1:17,0:17:42.58:250,43,0	1/1:4,0:4:5.77:33,6,0	1/1:4,0:2:6.01:58,6,0	0/1:16,3:18:99:155,0,119	0/0:22,0:22:66.21:0,66,1553	0/0:18,0:18:54.08:0,54,949	1/1:16,0:16:45.49:295,45,0	0/1:13,1:14:61.20:61,0,121	1/1:18,0:18:23.91:194,24,0	0/0:20,0:20:28.86:0,29,493	0/1:19,0:19:68.35:153,0,68	0/0:30,0:30:51.88:0,52,1592	0/1:11,0:9:12.18:134,0,12	0/1:24,2:25:99:142,0,205	0/1:11,2:11:77.20:84,0,77	1/1:2,0:2:5.93:40,6,0	1/1:22,0:20:10.22:168,10,0	0/1:25,1:24:99:161,0,231	0/1:24,0:24:98.83:99,0,207	0/0:27,0:27:64.60:0,65,634	1/1:10,0:10:27.28:205,27,0	0/1:34,2:36:87.87:88,0,236	./.
chr10	88257026	.	CTCTT	C	2145.98	PASS	AB=0.611;AC=11;AF=0.204;AN=54;BaseQRankSum=8.423;DP=494;FS=16.541;HRun=0;HaplotypeScore=127.0550;InbreedingCoeff=0.8429;MQ=54.18;MQ0=6;MQRankSum=-9.404;QD=23.33;ReadPosRankSum=-0.441;VQSLOD=2.2565;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:69.98:0,70,1345	0/0:8,0:8:24.08:0,24,566	0/0:13,0:12:17.95:0,18,405	0/0:13,0:11:24.08:0,24,487	0/0:25,0:23:54.18:0,54,1236	1/1:3,12:15:30.02:450,30,0	1/1:0,6:6:9.03:153,9,0	0/0:7,0:5:15.05:0,15,227	0/0:19,0:18:30.10:0,30,695	0/0:27,0:27:72.23:0,72,1561	0/0:15,0:15:36.12:0,36,869	1/1:5,16:21:48.08:757,48,0	0/0:18,0:18:30.09:0,30,618	1/1:3,15:18:29.58:408,30,0	0/0:25,0:25:66.16:0,66,1491	0/0:16,0:16:18.06:0,18,422	0/0:28,0:28:63.21:0,63,1436	0/1:4,7:10:22.98:237,0,23	0/0:18,0:16:30.57:0,31,657	0/0:16,0:14:20.94:0,21,390	0/0:2,0:2:6.01:0,6,68	1/1:10,11:19:26.12:314,26,0	0/0:25,0:23:45.95:0,46,895	0/0:23,0:23:45.27:0,45,867	0/0:26,0:26:45.07:0,45,1019	0/0:11,0:11:33.11:0,33,554	0/0:30,0:30:45.15:0,45,1064	./.
chr10	88257585	.	C	CA	1769.02	PASS	AB=0.810;AC=23;AF=0.411;AN=56;BaseQRankSum=-3.797;DP=475;FS=4.222;HRun=13;HaplotypeScore=74.4826;InbreedingCoeff=0.1774;MQ=59.02;MQ0=15;MQRankSum=0.169;QD=6.78;ReadPosRankSum=-1.838;VQSLOD=2.3215;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,2:29:14.25:0,14,340	0/0:5,0:5:11.88:0,12,81	0/1:11,1:9:42.82:43,0,49	0/1:16,0:11:15.50:15,0,32	1/1:10,6:15:3.44:171,3,0	0/1:14,2:16:22.95:23,0,149	0/0:19,1:20:19.77:0,20,280	0/1:18,2:20:7.96:8,0,204	0/1:7,2:9:11.67:30,0,12	0/0:23,0:22:34.69:0,35,232	0/1:16,1:18:19.36:19,0,153	0/0:9,0:9:14.83:0,15,102	1/1:4,5:10:0.29:133,0,0	0/0:16,0:16:38.66:0,39,266	1/1:8,5:13:15.48:137,15,0	1/1:1,7:8:18.02:167,18,0	0/0:34,0:31:41.54:0,42,411	0/0:31,0:29:64.47:0,64,435	0/1:11,12:24:0.56:258,0,1	0/1:3,9:10:2.54:121,0,3	0/1:9,2:10:10.34:10,0,71	0/0:15,0:15:17.67:0,18,122	1/1:9,5:15:6.06:173,6,0	0/1:9,9:17:31.68:165,0,32	1/1:5,13:18:30.03:277,30,0	0/0:17,1:20:20.84:0,21,271	0/1:11,10:22:7.29:193,0,7	0/0:4,0:5:2:0,2,6
chr10	88258072	.	TC	T	4530.92	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.274;DP=673;FS=0.000;HRun=3;HaplotypeScore=72.1147;InbreedingCoeff=0.9998;MQ=95.28;MQ0=0;MQRankSum=-4.864;QD=33.32;ReadPosRankSum=3.397;VQSLOD=5.2878;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,147,2072	0/0:9,0:9:27.08:0,27,370	0/0:40,0:40:99:0,106,1341	0/0:29,0:29:73.06:0,73,982	0/0:22,0:22:60.20:0,60,862	1/1:0,29:29:81.25:1003,81,0	1/1:0,24:24:51.16:632,51,0	0/0:25,0:25:75.25:0,75,1078	0/0:24,0:24:69.21:0,69,958	0/0:15,0:15:45.14:0,45,632	0/0:15,0:15:45.15:0,45,647	1/1:0,16:16:42.13:520,42,0	0/0:16,0:16:48.09:0,48,628	1/1:1,22:23:66.21:812,66,0	0/0:17,0:17:51.16:0,51,714	0/0:17,0:17:51.17:0,51,733	0/0:23,0:23:69.23:0,69,989	1/1:0,23:23:66.21:818,66,0	0/0:25,0:25:72.23:0,72,1019	0/0:21,0:21:60.16:0,60,807	0/0:35,0:35:99:0,99,1402	1/1:0,21:21:63.11:745,63,0	0/0:25,0:25:72.23:0,72,1016	0/0:35,0:35:96.28:0,96,1345	0/0:24,0:24:72.24:0,72,1033	0/0:25,0:25:75.25:0,75,1065	0/0:29,0:29:84.28:0,84,1209	0/0:14,0:14:42.14:0,42,604
chr10	88258467	.	GC	G	13472.65	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=11.981;DP=643;FS=3.959;HRun=1;HaplotypeScore=86.0763;InbreedingCoeff=0.9990;MQ=89.21;MQ0=1;MQRankSum=-3.399;QD=36.41;ReadPosRankSum=5.603;VQSLOD=5.0840;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,1895	0/0:8,0:8:24.08:0,24,384	0/0:24,0:24:34.55:0,35,898	0/0:27,0:26:71.81:0,72,987	1/1:0,15:15:32.97:410,33,0	1/1:0,24:24:60.20:835,60,0	1/1:0,35:35:99:1400,102,0	0/0:24,0:24:69.23:0,69,1077	1/1:0,23:23:60.20:839,60,0	0/0:18,0:18:42.11:0,42,544	0/0:10,0:10:24.04:0,24,315	1/1:1,26:27:81.22:1072,81,0	1/1:1,21:22:53.93:750,54,0	1/1:0,17:17:51.17:691,51,0	1/1:0,26:26:66.22:923,66,0	1/1:1,20:21:51.17:706,51,0	0/0:25,0:25:75.26:0,75,1197	1/1:0,30:30:78.26:1089,78,0	1/1:0,30:30:87.28:1202,87,0	1/1:0,12:12:33.06:436,33,0	0/0:48,0:48:99:0,132,1965	1/1:0,20:20:48.13:622,48,0	1/1:2,7:9:24.07:318,24,0	1/1:0,29:29:78.26:1090,78,0	1/1:0,16:16:36.12:504,36,0	0/0:20,0:20:54.14:0,54,758	1/1:0,14:14:42.14:585,42,0	0/0:24,0:24:72.20:0,72,1094
chr10	88258884	.	AGACATCGAAGTTGGT	A	1818.01	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=1.802;DP=603;FS=19.882;HRun=0;HaplotypeScore=215.7227;InbreedingCoeff=0.8871;MQ=61.84;MQ0=25;MQRankSum=0.029;QD=14.54;ReadPosRankSum=-1.707;VQSLOD=1.1442;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:55:99:0,150,1227	0/0:12,0:12:32.89:0,33,260	0/0:23,0:6:11.09:0,11,127	0/1:36,0:17:40.74:41,0,231	0/0:24,0:24:65.87:0,66,535	1/1:8,0:8:23.97:200,24,0	1/1:21,0:19:53.80:446,54,0	0/0:22,0:19:48.03:0,48,435	0/0:26,0:26:68.78:0,69,551	0/0:32,0:30:77.88:0,78,717	0/0:21,0:20:41.90:0,42,341	1/1:20,0:20:50.87:423,51,0	0/0:21,0:19:56.75:0,57,450	1/1:24,0:24:68.83:567,69,0	0/0:27,0:26:71.45:0,71,539	0/0:14,0:13:35.87:0,36,288	0/0:25,0:24:59.73:0,60,489	1/1:6,0:6:18:156,18,0	0/0:23,0:21:23.38:0,23,437	0/0:21,0:21:62.89:0,63,516	0/0:31,0:31:92.84:0,93,767	1/1:3,7:10:26.59:176,27,0	0/0:19,0:18:50.91:0,51,416	0/0:31,0:30:89.60:0,90,707	0/0:13,0:12:32.96:0,33,275	0/0:12,0:10:29.91:0,30,250	0/0:20,0:20:53.61:0,54,402	0/0:5,0:5:14.96:0,15,120
chr10	88259080	.	G	GT	4779.46	PASS	AB=0.964;AC=33;AF=0.589;AN=56;BaseQRankSum=6.383;DP=531;FS=0.890;HRun=7;HaplotypeScore=117.3604;InbreedingCoeff=0.6822;MQ=70.92;MQ0=5;MQRankSum=-7.375;QD=14.80;ReadPosRankSum=-1.901;VQSLOD=3.9603;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:81.01:0,81,769	0/0:9,0:9:24.03:0,24,232	0/0:28,0:16:22.86:0,23,242	0/0:27,0:20:2.34:0,2,138	1/1:5,11:16:40.58:398,41,0	0/0:15,0:15:1.20:0,1,5	0/1:17,0:17:11.64:12,0,18	1/1:18,4:22:42.81:344,43,0	1/1:8,7:15:25.58:266,26,0	0/0:23,0:23:35.53:0,36,525	0/0:20,0:20:54.04:0,54,520	0/0:17,0:17:3.56:0,4,9	1/1:5,14:19:47.97:464,48,0	0/1:19,0:19:4.47:19,0,4	1/1:5,19:24:43.96:378,44,0	1/1:3,20:23:39.01:363,39,0	0/0:27,0:27:69.10:0,69,666	0/0:10,0:10:4.90:0,5,10	1/1:14,3:17:29.81:320,30,0	1/1:7,8:15:32.69:383,33,0	1/1:5,7:12:11.82:110,12,0	1/1:17,0:17:6.34:41,6,0	1/1:3,8:11:26.95:257,27,0	1/1:8,13:20:35.89:356,36,0	1/1:2,19:21:35.71:268,36,0	0/1:22,3:25:30.12:284,0,30	1/1:11,12:23:37.35:400,37,0	1/1:6,0:6:16.80:118,17,0
chr10	88259081	.	TTTTTTTG	T	8563.48	PASS	AB=0.847;AC=30;AF=0.536;AN=56;BaseQRankSum=1.997;DP=528;FS=1.205;HRun=0;HaplotypeScore=157.1181;InbreedingCoeff=0.8153;MQ=70.61;MQ0=5;MQRankSum=-6.594;QD=30.15;ReadPosRankSum=0.877;VQSLOD=4.7552;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.29:0,90,3023	0/0:9,0:9:24.08:0,24,821	0/0:29,0:16:25.67:0,26,552	0/0:26,0:19:25.39:0,25,460	1/1:16,0:16:27.91:482,28,0	0/0:13,0:13:21.61:0,22,182	0/0:17,0:17:7.19:0,7,271	1/1:15,7:22:45.14:933,45,0	1/1:13,2:15:35.56:575,36,0	0/0:23,0:23:63.19:0,63,1979	0/0:20,0:20:57.18:0,57,1829	0/0:17,0:17:29.63:0,30,268	1/1:19,0:19:46.73:702,47,0	0/0:20,0:20:4.94:0,5,262	1/1:23,0:23:45.15:754,45,0	1/1:24,0:24:42.04:735,42,0	0/0:27,0:27:72.23:0,72,2479	0/0:10,0:10:7.20:0,7,145	1/1:7,8:15:29.97:370,30,0	1/1:15,0:15:38.13:548,38,0	1/1:9,3:12:12:168,12,0	0/1:17,0:17:9.33:9,0,247	1/1:11,0:11:20.76:362,21,0	1/1:21,0:20:24.14:458,24,0	1/1:21,0:21:39.01:552,39,0	0/1:14,11:25:99:951,0,139	1/1:21,1:22:44.72:603,45,0	1/1:2,4:6:18.06:362,18,0
chr10	88259087	.	TG	T	6664.44	PASS	AB=0.946;AC=43;AF=0.768;AN=56;BaseQRankSum=13.101;DP=514;FS=8.672;HRun=1;HaplotypeScore=115.1204;InbreedingCoeff=0.7213;MQ=67.67;MQ0=5;MQRankSum=-9.216;QD=16.58;ReadPosRankSum=0.540;VQSLOD=4.4000;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:91.88:0,92,1087	0/0:8,0:8:24.07:0,24,297	0/1:27,3:16:1.68:2,0,301	0/1:24,2:19:30.63:31,0,165	1/1:16,2:18:43.81:280,44,0	1/1:0,12:12:27.09:362,27,0	1/1:8,11:19:55.25:642,55,0	1/1:20,0:20:42.93:248,43,0	1/1:13,1:14:34.74:230,35,0	0/0:25,0:25:68.64:0,69,743	0/0:19,0:19:51.37:0,51,625	1/1:1,12:13:30.02:358,30,0	1/1:17,0:17:36.16:312,36,0	1/1:6,12:18:45.10:570,45,0	1/1:18,1:19:44.82:392,45,0	1/1:22,0:22:44.82:385,45,0	0/0:28,0:28:74.08:0,74,890	1/1:1,10:11:6.19:244,6,0	1/1:12,0:12:28.25:167,28,0	1/1:16,0:16:41:267,41,0	1/1:10,0:10:11.58:64,12,0	1/1:4,14:18:51.03:608,51,0	1/1:11,0:11:29.36:221,29,0	1/1:23,1:23:42.73:309,43,0	1/1:21,2:23:43.58:369,44,0	0/1:25,0:25:44.98:188,0,45	1/1:17,1:18:47.63:323,48,0	1/1:6,0:6:17.24:94,17,0
chr10	88259089	.	TTTTTTTG	T	4364.31	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=5.489;DP=522;FS=0.385;HRun=0;HaplotypeScore=179.9391;InbreedingCoeff=0.8157;MQ=65.40;MQ0=5;MQRankSum=-8.969;QD=16.59;ReadPosRankSum=1.272;VQSLOD=4.3061;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.25:0,90,2932	0/0:8,0:8:24.07:0,24,700	0/0:30,0:16:21.43:0,21,460	0/0:25,0:18:22.68:0,23,378	1/1:20,1:21:8.43:212,8,0	0/0:12,0:12:24.80:0,25,202	0/0:18,0:18:32.37:0,32,339	0/1:19,0:19:0.62:374,0,1	1/1:15,0:15:29.70:263,30,0	0/0:25,0:25:57.14:0,57,1888	0/0:20,0:20:51.13:0,51,1577	0/0:13,0:13:29.95:0,30,301	1/1:18,2:20:30.34:382,30,0	0/0:19,0:19:37.79:0,38,352	1/1:17,1:18:44.96:448,45,0	1/1:21,3:24:44.64:543,45,0	0/0:28,0:28:72.22:0,72,2316	0/0:11,0:11:18.84:0,19,207	1/1:13,0:13:11.28:73,11,0	1/1:17,0:17:38.05:326,38,0	1/1:9,0:9:2.75:35,3,0	0/0:19,0:19:39.14:0,39,368	1/1:11,1:12:1.66:220,2,0	1/1:23,0:22:34.70:227,35,0	1/1:23,1:24:47.18:367,47,0	0/1:25,0:25:99:419,0,108	1/1:17,0:17:38.20:321,38,0	1/1:6,0:6:12.04:155,12,0
chr10	88259090	.	TTTTTTG	T	7118.84	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=3.734;DP=524;FS=1.674;HRun=0;HaplotypeScore=161.1834;InbreedingCoeff=0.7589;MQ=63.49;MQ0=5;MQRankSum=-9.536;QD=25.61;ReadPosRankSum=0.056;VQSLOD=4.3201;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.26:0,93,2630	0/0:8,0:8:24.05:0,24,606	0/0:30,0:15:22.10:0,22,439	0/0:24,0:17:7.17:0,7,315	1/1:14,7:21:45.02:436,45,0	0/0:12,0:12:22.46:0,22,104	0/0:18,0:18:12.75:0,13,170	0/1:19,0:19:5.14:359,0,5	1/1:11,4:15:35.68:403,36,0	0/0:24,0:24:57.15:0,57,1675	0/0:20,0:20:51.14:0,51,1383	0/0:13,0:13:27.56:0,28,174	1/1:12,9:21:43.58:664,44,0	0/0:19,0:19:34.55:0,35,228	1/1:7,11:18:45.07:778,45,0	1/1:17,8:25:54.03:892,54,0	0/0:28,0:28:72.21:0,72,2054	0/1:11,0:11:16.60:17,0,107	1/1:11,2:13:14.96:147,15,0	1/1:11,6:17:44.91:630,45,0	1/1:10,0:10:3.90:40,4,0	0/0:18,0:18:26.55:0,27,218	1/1:7,5:12:18.14:381,18,0	1/1:18,5:22:41.85:479,42,0	1/1:14,10:24:48.04:754,48,0	0/1:26,0:26:99:362,0,107	1/1:10,7:17:50.90:637,51,0	1/1:6,0:6:12.04:140,12,0
chr10	88259094	.	TTG	T	5487.75	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=11.740;DP=514;FS=0.000;HRun=0;HaplotypeScore=129.9883;InbreedingCoeff=0.6405;MQ=58.81;MQ0=5;MQRankSum=-10.278;QD=14.63;ReadPosRankSum=0.838;VQSLOD=4.8030;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1345	0/0:8,0:8:24.03:0,24,295	0/0:28,0:12:18.87:0,19,269	0/1:22,0:15:9.30:9,0,194	1/1:20,1:21:49.93:359,50,0	1/1:12,0:12:17.45:163,17,0	1/1:19,0:19:10.79:288,11,0	1/1:20,2:22:42.05:291,42,0	1/1:13,2:15:26.21:258,26,0	0/0:22,0:22:57.12:0,57,778	0/0:18,0:18:53.68:0,54,665	1/1:10,0:10:10.86:156,11,0	1/1:18,1:19:41.95:368,42,0	1/1:18,0:18:4.02:180,4,0	1/1:18,0:18:47.95:443,48,0	1/1:24,0:24:52.02:442,52,0	0/0:29,0:29:80.74:0,81,1002	0/1:11,0:11:10.06:97,0,10	1/1:15,0:15:20.92:171,21,0	1/1:16,1:17:43.92:371,44,0	1/1:8,0:8:13.05:65,13,0	0/1:19,0:19:4.85:160,0,5	1/1:12,0:12:32.01:274,32,0	1/1:23,0:22:34.52:341,35,0	1/1:22,0:22:45.49:398,45,0	0/1:27,0:27:32.96:228,0,33	1/1:15,2:17:42.85:376,43,0	1/1:4,0:4:11.13:52,11,0
chr10	88259095	.	TG	T	4592.92	PASS	AB=0.869;AC=42;AF=0.750;AN=56;BaseQRankSum=12.175;DP=507;FS=3.922;HRun=1;HaplotypeScore=123.6795;InbreedingCoeff=0.7153;MQ=58.88;MQ0=5;MQRankSum=-10.846;QD=12.41;ReadPosRankSum=0.405;VQSLOD=3.6200;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1046	0/0:8,0:8:23.82:0,24,228	0/0:28,0:12:20.39:0,20,234	0/1:20,2:15:29.39:29,0,140	1/1:21,0:21:52.76:359,53,0	1/1:12,0:12:14.48:70,14,0	1/1:19,0:19:9.02:134,9,0	1/1:22,0:22:49.13:270,49,0	1/1:15,0:15:17.50:220,17,0	0/0:20,0:20:57.09:0,57,585	0/0:18,0:18:50.86:0,51,512	1/1:10,0:10:14.44:82,14,0	1/1:17,0:17:39.51:318,40,0	1/1:17,0:17:5.07:79,5,0	1/1:19,0:19:50.80:399,51,0	1/1:24,0:24:52.87:395,53,0	0/0:29,0:29:79.65:0,80,771	1/1:10,0:10:6.05:53,6,0	1/1:14,0:14:20.89:159,21,0	1/1:17,0:17:45.24:341,45,0	1/1:8,0:8:12.97:64,13,0	1/1:18,1:19:2.01:87,2,0	1/1:12,0:12:31.70:241,32,0	1/1:23,0:22:34.65:304,35,0	1/1:23,0:23:48.60:367,49,0	0/1:18,5:23:24.19:258,0,24	1/1:17,0:17:34.58:327,35,0	1/1:6,0:6:12.29:36,12,0
chr10	88259096	.	GT	G	1684.81	PASS	AB=0.879;AC=27;AF=0.482;AN=56;BaseQRankSum=12.159;DP=508;FS=0.420;HRun=11;HaplotypeScore=134.3682;InbreedingCoeff=0.1912;MQ=59.86;MQ0=5;MQRankSum=-11.368;QD=5.03;ReadPosRankSum=4.633;VQSLOD=1.2158;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.14:0,93,952	0/0:7,0:8:17.87:0,18,168	0/0:29,0:13:10.44:0,10,152	0/0:19,1:14:9.57:0,10,127	0/1:14,0:23:7.39:7,0,8	1/1:4,7:11:23.95:194,24,0	1/1:4,14:18:35.89:288,36,0	1/1:15,7:22:38.76:278,39,0	0/1:11,0:16:8.73:9,0,42	0/0:20,0:20:48.11:0,48,501	0/0:17,0:18:44.95:0,45,459	0/1:2,8:10:3.63:161,0,4	0/1:13,0:17:0.73:25,0,1	1/1:5,12:17:6.06:186,6,0	1/1:19,0:19:19.29:61,19,0	0/1:25,0:26:0.83:31,0,1	0/0:25,0:28:68.67:0,69,689	0/1:4,6:10:44.90:115,0,45	0/0:14,0:15:3.06:0,3,31	0/1:17,0:17:9.94:10,0,23	1/1:4,3:7:5.95:48,6,0	0/1:4,13:17:6.35:138,0,6	0/1:10,0:13:0.34:16,0,0	0/1:22,0:22:9.66:17,0,10	0/1:22,0:22:9.76:29,0,10	0/1:12,0:23:20.98:93,0,21	0/1:17,0:17:10.80:11,0,35	1/1:3,4:7:17.94:146,18,0
chr10	88259377	.	AT	A	6294.31	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=7.238;DP=541;FS=3.684;HRun=11;HaplotypeScore=64.2146;InbreedingCoeff=0.8513;MQ=77.60;MQ0=4;MQRankSum=-1.416;QD=16.02;ReadPosRankSum=1.692;VQSLOD=5.8457;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,1:41:80.59:0,81,1050	0/0:14,0:14:36.09:0,36,383	0/0:28,0:18:3.78:0,4,167	0/1:22,0:16:16.16:16,0,85	1/1:4,18:23:40.62:325,41,0	1/1:4,12:16:32.96:271,33,0	1/1:3,23:26:56.92:468,57,0	1/1:7,19:26:56.90:467,57,0	1/1:3,16:19:44.93:369,45,0	0/0:21,0:21:57.07:0,57,589	0/0:16,0:16:42.11:0,42,447	1/1:2,16:18:35.91:296,36,0	1/1:2,7:9:20.97:172,21,0	1/1:2,10:12:29.96:246,30,0	1/1:3,14:17:29.95:246,30,0	1/1:4,12:16:35:294,35,0	0/0:25,2:27:16.87:0,17,579	1/1:3,21:24:50.94:419,51,0	1/1:6,13:19:9.91:285,10,0	1/1:6,10:16:38.94:318,39,0	1/1:2,8:10:17.97:148,18,0	1/1:2,9:10:23.96:197,24,0	1/1:2,15:18:40.98:324,41,0	1/1:4,17:21:38.93:321,39,0	1/1:2,14:16:35.95:295,36,0	1/1:5,15:20:38.92:320,39,0	1/1:7,19:26:49.64:399,50,0	1/1:0,8:8:11.99:99,12,0
chr10	88259725	.	C	CCACACA	2614.43	PASS	AB=0.722;AC=35;AF=0.673;AN=52;BaseQRankSum=0.734;DP=598;FS=0.000;HRun=0;HaplotypeScore=137.2424;InbreedingCoeff=0.4818;MQ=57.12;MQ0=21;MQRankSum=-2.814;QD=6.52;ReadPosRankSum=-1.205;VQSLOD=2.1477;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:23.31:0,23,319	0/0:10,0:10:12.04:0,12,177	./.	./.	0/0:8,0:15:0.26:0,0,0	1/1:14,0:23:3.01:38,3,0	1/1:30,0:31:12.04:206,12,0	1/1:23,0:23:8.48:62,8,0	1/1:16,2:22:6.02:166,6,0	0/0:18,0:24:12.28:0,12,122	0/0:15,0:15:17.76:0,18,250	1/1:10,7:19:8.60:234,9,0	1/1:11,0:14:15:239,15,0	1/1:10,5:21:6.02:167,6,0	1/1:10,1:16:9.03:238,9,0	1/1:11,0:14:8.59:92,9,0	0/0:30,0:31:33.09:0,33,610	0/1:13,5:22:27.61:357,0,28	1/1:10,0:12:17.06:231,17,0	1/1:10,1:11:9.03:119,9,0	0/1:24,0:27:5.89:91,0,6	0/1:6,0:18:0:0,0,0	1/1:11,0:23:2.85:78,3,0	0/1:19,2:29:0.22:1,0,0	0/1:10,0:15:31.92:32,0,55	1/1:15,0:21:14.96:220,15,0	1/1:16,0:18:6.23:91,6,0	1/1:3,0:8:9.03:115,9,0
chr10	88260054	.	TA	T	1330.62	PASS	AB=0.778;AC=14;AF=0.250;AN=56;BaseQRankSum=0.281;DP=447;FS=2.234;HRun=11;HaplotypeScore=83.8480;InbreedingCoeff=0.5980;MQ=55.60;MQ0=1;MQRankSum=1.049;QD=12.55;ReadPosRankSum=0.697;VQSLOD=3.7645;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:45.05:0,45,458	0/1:6,1:7:6.61:7,0,135	0/0:10,0:5:8.94:0,9,81	0/0:10,1:3:4.25:0,4,30	0/0:15,0:15:38.87:0,39,383	0/1:3,20:23:1.03:408,0,1	1/1:0,8:8:23.97:197,24,0	0/0:6,0:15:28.69:0,29,154	0/0:17,0:17:21.01:0,21,211	0/0:26,0:26:63.14:0,63,658	0/0:20,1:21:35.51:0,36,583	1/1:1,11:12:32.96:271,33,0	0/1:9,2:10:31.18:31,0,98	1/1:0,6:6:17.98:148,18,0	0/0:17,0:16:27.06:0,27,281	0/0:14,0:12:27.07:0,27,286	0/0:28,0:28:75.19:0,75,799	1/1:1,14:14:35.97:300,36,0	0/0:18,1:19:0.94:0,1,388	0/1:15,3:17:22.80:23,0,397	0/0:1,0:5:14.23:0,14,86	1/1:0,6:6:14.99:126,15,0	0/0:12,0:12:33.51:0,34,340	0/0:15,1:15:8.44:0,8,295	0/0:18,1:19:17.45:0,17,379	0/0:6,0:27:66.20:0,66,377	0/0:24,1:24:32.49:0,32,537	0/0:4,1:19:21.22:0,21,209
chr10	88260121	.	TTC	T	3673.46	PASS	AB=0.807;AC=41;AF=0.732;AN=56;BaseQRankSum=8.439;DP=509;FS=0.000;HRun=0;HaplotypeScore=91.0101;InbreedingCoeff=0.6334;MQ=63.65;MQ0=23;MQRankSum=0.849;QD=10.56;ReadPosRankSum=1.302;VQSLOD=2.9245;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:50.96:0,51,591	0/0:9,0:9:24.03:0,24,288	0/0:37,0:12:18.02:0,18,186	0/0:36,0:17:21.41:0,21,201	1/1:3,16:19:23.91:264,24,0	1/1:16,0:16:23.19:139,23,0	1/1:15,0:14:2.84:15,3,0	1/1:8,0:21:32.76:239,33,0	1/1:4,5:10:11.73:100,12,0	0/0:25,0:25:36.77:0,37,452	0/1:31,1:32:10.77:11,0,641	1/1:9,0:9:14.35:80,14,0	1/1:9,4:13:29.47:269,29,0	1/1:11,0:11:19.99:102,20,0	1/1:3,9:13:5.85:50,6,0	1/1:1,10:11:9.03:107,9,0	0/0:30,0:29:33.40:0,33,713	1/1:11,1:12:20.73:147,21,0	1/1:10,5:13:14.92:133,15,0	1/1:12,1:14:8.59:197,9,0	1/1:14,3:17:38.91:347,39,0	1/1:11,0:11:20.61:135,21,0	1/1:10,3:13:5.77:205,6,0	1/1:6,17:24:35.92:394,36,0	1/1:4,12:16:5.84:50,6,0	0/1:19,5:24:14.55:338,0,15	0/1:6,8:15:4.54:130,0,5	1/1:10,5:15:5.04:223,5,0
chr10	88260138	.	TCTCTCACACACA	T	4510.99	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=0.697;DP=511;FS=11.723;HRun=0;HaplotypeScore=163.0722;InbreedingCoeff=0.5382;MQ=53.41;MQ0=22;MQRankSum=-4.546;QD=26.85;ReadPosRankSum=-2.283;VQSLOD=2.9076;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.24:0,69,3047	0/0:8,0:8:24.08:0,24,1009	0/0:32,0:6:18.06:0,18,391	0/0:34,0:11:27.65:0,28,567	0/0:19,0:18:30.10:0,30,1134	1/1:10,5:16:33.11:871,33,0	1/1:2,11:12:6.02:205,6,0	0/1:17,0:17:99:229,0,232	0/0:12,0:12:12.04:0,12,343	0/0:24,0:24:70.48:0,70,2502	0/0:28,0:28:78.27:0,78,3715	1/1:7,4:11:24.08:725,24,0	0/0:19,0:19:51.18:0,51,1815	1/1:0,11:11:21.07:807,21,0	0/0:14,0:14:12.04:0,12,391	0/0:13,0:13:18.06:0,18,718	0/0:32,0:31:86.85:0,87,3738	1/1:12,1:13:26.92:534,27,0	0/0:15,0:13:28.01:0,28,890	0/0:17,0:17:43.03:0,43,1465	0/1:22,0:22:99:147,0,1583	1/1:9,4:13:27.09:680,27,0	0/0:12,0:12:27.09:0,27,991	0/0:24,0:24:46.04:0,46,1758	0/0:15,0:14:9.50:0,10,319	0/1:27,0:27:99:221,0,1741	0/1:12,0:12:39.61:40,0,553	0/1:13,0:13:51.36:51,0,1088
chr10	88260140	.	TCTCA	T	1908.05	PASS	AB=0.981;AC=25;AF=0.446;AN=56;BaseQRankSum=7.102;DP=513;FS=23.500;HRun=0;HaplotypeScore=109.9221;InbreedingCoeff=0.0598;MQ=54.25;MQ0=22;MQRankSum=-1.440;QD=6.49;ReadPosRankSum=-0.972;VQSLOD=0.8475;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:71.95:0,72,1158	0/0:8,0:8:24.03:0,24,398	0/0:33,0:6:18.02:0,18,186	0/0:36,0:13:21.12:0,21,246	0/0:19,0:18:2.52:0,3,93	1/1:17,0:17:35.24:269,35,0	1/1:12,0:11:5.93:45,6,0	0/1:16,0:16:5.06:224,0,5	0/1:10,1:11:10.20:30,0,10	0/0:23,0:23:62.79:0,63,746	0/0:26,0:27:56.10:0,56,1228	1/1:10,0:10:23.34:179,23,0	0/1:18,1:19:81.53:82,0,159	1/1:11,0:11:21.03:199,21,0	0/1:15,0:15:19.55:20,0,47	0/0:13,0:13:17.01:0,17,104	0/0:34,0:33:59.45:0,59,1377	1/1:13,0:13:25.83:178,26,0	0/1:14,0:12:32.42:32,0,122	0/1:16,1:17:99:159,0,162	0/1:24,0:24:96.46:96,0,253	1/1:13,0:13:26.69:197,27,0	0/1:14,1:15:99:135,0,114	0/1:24,0:24:5.21:5,0,157	0/1:16,0:15:17.30:39,0,17	0/1:24,0:24:99:137,0,286	0/1:10,0:10:34.77:35,0,37	0/1:13,0:13:31.98:32,0,135
chr10	88260142	.	TCACACACA	T	1999.84	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=6.465;DP=515;FS=8.667;HRun=0;HaplotypeScore=141.3438;InbreedingCoeff=0.8796;MQ=54.28;MQ0=22;MQRankSum=-6.383;QD=18.52;ReadPosRankSum=0.492;VQSLOD=2.5536;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:57.20:0,57,2179	0/0:8,0:8:15.05:0,15,555	./.	0/1:35,0:13:1.41:1,0,346	0/0:19,0:18:30.10:0,30,858	1/1:12,4:16:27.08:561,27,0	1/1:12,0:11:6.02:135,6,0	0/0:17,0:17:22.58:0,23,408	0/0:11,0:11:12.04:0,12,273	0/0:20,0:23:48.16:0,48,1431	0/0:27,0:27:72.22:0,72,2303	1/1:7,2:9:21.06:478,21,0	0/0:18,0:19:51.17:0,51,1316	1/1:11,0:11:21.07:456,21,0	0/0:15,0:15:15.05:0,15,433	0/0:13,0:13:18.06:0,18,577	0/0:37,0:36:81.11:0,81,2780	1/1:13,0:13:8.85:210,9,0	0/0:14,0:12:21.07:0,21,698	0/0:17,0:17:42.13:0,42,1087	0/0:24,0:24:54.19:0,54,1742	1/1:10,1:12:15.03:333,15,0	0/0:15,0:15:33.11:0,33,911	0/0:24,0:24:45.15:0,45,1333	0/0:17,0:16:15.52:0,16,421	0/0:24,0:24:53.39:0,53,1680	0/0:10,0:10:15.05:0,15,376	0/0:13,0:13:33.11:0,33,1005
chr10	88260647	.	CA	C	1707.26	PASS	AB=0.967;AC=23;AF=0.411;AN=56;BaseQRankSum=8.937;DP=419;FS=4.231;HRun=1;HaplotypeScore=64.5362;InbreedingCoeff=0.5899;MQ=85.46;MQ0=2;MQRankSum=-3.736;QD=9.28;ReadPosRankSum=2.080;VQSLOD=1.4519;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:99:0,132,1825	0/0:6,0:6:15.05:0,15,224	0/0:16,0:16:0.89:0,1,428	0/0:21,0:21:19.82:0,20,489	0/0:12,0:12:1.78:0,2,128	1/1:21,0:21:46.43:181,46,0	0/1:26,0:26:65.97:146,0,66	1/1:9,7:16:35.90:294,36,0	0/0:6,0:6:16.52:0,17,105	0/0:16,0:16:48.15:0,48,689	0/0:19,0:19:54.16:0,54,766	1/1:14,1:15:4.55:93,5,0	0/0:8,0:8:1.31:0,1,4	1/1:19,0:19:19.42:149,19,0	0/0:19,1:20:13.70:0,14,194	0/0:10,1:11:9.84:0,10,63	0/0:31,0:30:84.20:0,84,1149	0/1:12,0:12:19.29:35,0,19	0/1:8,1:9:10.57:80,0,11	1/1:0,6:6:11.87:83,12,0	1/1:12,3:15:17.06:138,17,0	1/1:21,0:21:0.32:131,0,0	0/0:9,0:9:8.57:0,9,56	0/0:5,1:5:2.61:0,3,24	0/0:9,0:9:17.70:0,18,178	1/1:3,4:7:20.57:159,21,0	1/1:5,1:6:17.81:140,18,0	1/1:5,6:11:32.94:273,33,0
chr10	88260648	.	AC	A	2950.77	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=8.495;DP=415;FS=1.464;HRun=6;HaplotypeScore=63.7424;InbreedingCoeff=0.5481;MQ=83.89;MQ0=2;MQRankSum=-2.703;QD=11.13;ReadPosRankSum=1.554;VQSLOD=1.3888;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:99:0,120,1544	0/0:6,0:6:18.05:0,18,223	0/0:14,0:15:29.86:0,30,317	0/0:18,0:20:37.74:0,38,402	1/1:13,0:13:13.27:89,13,0	1/1:0,21:21:57.14:612,57,0	1/1:5,21:26:51.13:547,51,0	0/1:15,0:15:27.47:27,0,37	1/1:6,0:6:8.16:39,8,0	0/0:16,0:16:45.15:0,45,590	0/0:19,0:19:48.16:0,48,631	1/1:2,13:15:33.08:354,33,0	1/1:8,0:8:2.56:13,3,0	1/1:1,18:19:48.12:516,48,0	0/1:21,0:21:15.32:15,0,16	1/1:11,0:11:4.12:18,4,0	0/0:29,0:28:75.23:0,75,970	1/1:2,9:11:18.04:193,18,0	0/1:9,0:9:2.89:3,0,50	1/1:7,0:7:2.63:7,3,0	1/1:13,0:13:4.36:18,4,0	1/1:2,18:20:54.14:580,54,0	1/1:9,0:9:6.99:33,7,0	0/1:7,0:6:0:0,0,0	0/1:9,0:9:2.57:3,0,73	1/1:7,0:7:11.78:34,12,0	0/1:7,0:7:6.55:7,0,21	1/1:11,0:11:11.23:32,11,0
chr10	88260651	.	CCCCT	C	741.17	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=5.629;DP=409;FS=1.493;HRun=0;HaplotypeScore=87.3166;InbreedingCoeff=0.5254;MQ=84.32;MQ0=2;MQRankSum=-6.392;QD=10.29;ReadPosRankSum=-1.829;VQSLOD=2.7449;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:99:0,120,2906	0/0:6,0:6:18.06:0,18,451	0/0:15,0:15:37.94:0,38,648	0/0:21,0:21:32.91:0,33,776	0/0:13,0:13:24.29:0,24,147	0/0:21,0:21:57.14:0,57,606	0/0:23,0:23:53.98:0,54,581	1/1:8,7:15:21.49:252,21,0	0/1:6,0:6:12.75:13,0,43	0/0:16,0:16:45.15:0,45,1135	0/0:20,0:20:57.11:0,57,1268	0/0:14,0:14:33.08:0,33,348	0/0:9,0:9:2.29:0,2,6	0/0:20,0:20:51.13:0,51,545	0/0:19,0:19:0.74:0,1,15	0/0:13,0:13:3.39:0,3,19	0/0:30,0:29:81.27:0,81,1942	0/0:12,0:12:21.02:0,21,213	0/0:7,0:7:0.17:0,0,98	0/1:8,0:8:12.15:12,0,16	1/1:11,3:14:15.36:124,15,0	0/0:19,0:19:57.14:0,57,605	0/0:10,0:10:6.21:0,6,37	0/1:7,0:6:0:0,0,0	0/0:8,0:8:15.45:0,15,186	1/1:4,4:8:21.06:259,21,0	0/1:7,0:7:8.20:8,0,54	1/1:1,6:7:18.06:234,18,0
chr10	88260653	.	CCT	C	1407.55	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=4.944;DP=412;FS=15.032;HRun=0;HaplotypeScore=71.9527;InbreedingCoeff=0.7945;MQ=83.42;MQ0=2;MQRankSum=-4.655;QD=9.77;ReadPosRankSum=-4.503;VQSLOD=0.7270;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:99:0,123,1979	0/0:6,0:6:18.06:0,18,301	0/0:15,0:15:15.03:0,15,438	0/0:20,0:20:28.52:0,29,504	1/1:15,0:15:25.73:150,26,0	0/0:23,0:23:53.28:0,53,212	0/0:23,0:23:46.68:0,47,188	1/1:15,0:15:26.72:221,27,0	1/1:5,0:5:14.67:127,15,0	0/0:15,0:15:45.15:0,45,758	0/0:20,0:20:60.11:0,60,893	0/0:16,0:16:32.59:0,33,141	1/1:10,0:10:2.72:41,3,0	0/0:19,0:19:41.72:0,42,146	1/1:14,2:16:11.71:145,12,0	1/1:12,0:12:5.69:56,6,0	0/0:30,0:29:84.20:0,84,1301	0/0:10,0:10:17.83:0,18,73	0/1:8,0:8:4.19:83,0,4	1/1:8,0:8:11.91:100,12,0	1/1:11,1:12:14.83:104,15,0	0/0:22,0:22:51.59:0,52,234	1/1:9,1:10:8.58:72,9,0	0/0:7,0:6:0.47:0,0,1	0/1:8,0:8:7.44:7,0,36	1/1:7,2:9:21.01:191,21,0	1/1:9,0:9:17.78:126,18,0	1/1:7,0:7:21.02:194,21,0
chr10	88260654	.	CT	C	2256.12	PASS	AB=0.923;AC=36;AF=0.643;AN=56;BaseQRankSum=10.674;DP=410;FS=5.842;HRun=1;HaplotypeScore=61.6784;InbreedingCoeff=0.5549;MQ=82.93;MQ0=2;MQRankSum=-3.080;QD=8.74;ReadPosRankSum=1.314;VQSLOD=1.1395;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:99:0,123,1571	0/0:6,0:6:18.06:0,18,238	0/0:14,1:15:14.71:0,15,316	0/0:19,0:19:42.37:0,42,406	1/1:0,15:15:26.93:286,27,0	0/1:23,0:23:0.18:93,0,0	0/1:24,0:24:21.70:130,0,22	1/1:7,3:10:26.82:208,27,0	1/1:6,0:6:18.03:194,18,0	0/0:18,0:18:45.10:0,45,590	0/0:21,0:21:63.09:0,63,736	0/1:16,0:16:18.59:78,0,19	1/1:0,10:10:3:33,3,0	1/1:19,0:19:29.15:135,29,0	1/1:4,11:15:11.97:112,12,0	1/1:1,11:12:5.99:63,6,0	0/0:30,0:29:84.19:0,84,1044	0/1:10,0:10:4.75:34,0,5	1/1:8,1:9:8.63:117,9,0	1/1:7,1:8:11.90:86,12,0	1/1:9,0:9:14.86:111,15,0	0/1:22,0:22:41.59:130,0,42	1/1:1,9:10:9.01:106,9,0	0/1:1,6:6:0:0,0,0	1/1:8,0:8:7.18:72,7,0	1/1:6,3:9:20.86:152,21,0	1/1:8,1:9:19.16:152,19,0	1/1:7,0:7:20.88:154,21,0
chr10	88261190	.	G	GT	952.19	PASS	AB=0.848;AC=12;AF=0.214;AN=56;BaseQRankSum=-1.906;DP=504;FS=4.641;HRun=13;HaplotypeScore=71.3853;InbreedingCoeff=0.1870;MQ=73.04;MQ0=2;MQRankSum=-2.124;QD=4.86;ReadPosRankSum=-2.245;VQSLOD=1.6148;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,2:42:21.19:0,21,500	0/0:5,0:8:0.31:0,0,67	0/1:17,0:16:15.53:16,0,47	0/1:19,0:16:8.13:13,0,8	0/0:19,0:20:16.42:0,16,227	0/0:19,0:20:21.68:0,22,280	0/0:12,0:13:22.78:0,23,148	0/1:17,13:30:5.53:264,0,6	0/1:11,3:14:22.95:23,0,152	0/0:24,0:24:53.42:0,53,369	0/0:16,3:20:12.74:0,13,223	0/0:12,0:12:23.72:0,24,164	0/0:12,0:12:26.68:0,27,183	0/0:15,1:16:9.04:0,9,191	0/0:11,1:13:7.99:0,8,166	0/1:9,3:12:1.08:1,0,137	0/0:15,3:18:7.81:0,8,198	0/0:11,1:12:29.71:0,30,205	0/1:18,1:24:40.03:40,0,133	0/1:18,2:22:28.29:28,0,226	1/1:5,4:12:14.85:126,15,0	0/0:12,0:12:23.69:0,24,161	0/0:15,1:17:12.61:0,13,215	0/0:6,0:6:14.86:0,15,103	0/0:21,0:23:33.09:0,33,204	1/1:16,11:28:14.58:379,15,0	0/0:16,2:20:7.13:0,7,153	0/1:5,10:16:5.45:216,0,5
chr10	88262052	.	GCACACA	G	1576.25	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=-1.784;DP=584;FS=4.652;HRun=0;HaplotypeScore=200.7199;InbreedingCoeff=0.7377;MQ=48.36;MQ0=7;MQRankSum=-4.892;QD=12.71;ReadPosRankSum=3.893;VQSLOD=2.5555;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:26:38.82:0,39,1013	0/0:12,0:12:18.04:0,18,513	./.	0/0:25,0:11:0.89:0,1,2	0/0:15,0:15:22.06:0,22,284	1/1:7,6:13:9.03:185,9,0	1/1:7,10:19:8.91:165,9,0	0/0:26,0:26:24.08:0,24,481	0/0:26,0:26:28.32:0,28,486	0/0:19,0:24:45.15:0,45,1094	0/0:11,0:13:12.03:0,12,248	1/1:15,16:33:33.54:619,34,0	0/0:25,0:25:50.91:0,51,930	1/1:10,10:23:15.05:289,15,0	0/0:24,0:24:23.11:0,23,286	0/0:31,0:31:25.46:0,25,396	0/0:13,0:15:33.10:0,33,854	1/1:12,2:14:12.04:220,12,0	0/0:16,0:15:24.05:0,24,476	0/0:14,0:14:3.57:0,4,59	0/0:29,0:30:3.01:0,3,74	1/1:12,8:21:15.05:265,15,0	0/0:23,0:23:20.07:0,20,302	0/0:18,0:18:0.20:0,0,278	0/0:20,0:21:0.35:0,0,167	0/0:21,0:22:39.33:0,39,672	0/0:18,0:18:12.04:0,12,262	0/0:12,0:12:2.98:0,3,21
chr10	88262074	.	A	ACACACACACACT	6326.95	PASS	AB=0.863;AC=24;AF=0.429;AN=56;BaseQRankSum=0.558;DP=620;FS=0.425;HRun=0;HaplotypeScore=251.9468;InbreedingCoeff=0.5577;MQ=47.68;MQ0=13;MQRankSum=-2.175;QD=18.45;ReadPosRankSum=-0.871;VQSLOD=3.5377;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:54.12:0,54,1297	0/0:13,0:13:27.01:0,27,632	0/0:19,0:7:11.17:0,11,134	0/0:23,0:6:5.66:0,6,97	1/1:10,0:16:21.48:288,21,0	0/0:15,0:15:18.01:0,18,333	0/0:23,0:23:23.84:0,24,319	1/1:25,0:25:36.84:522,37,0	1/1:16,0:22:32.23:545,32,0	0/0:32,0:32:77.62:0,78,1440	0/0:10,0:10:17.98:0,18,249	0/0:31,0:31:42.86:0,43,851	1/1:21,0:26:37.24:681,37,0	0/0:23,0:23:36.01:0,36,573	0/1:15,0:23:6.56:241,0,7	0/1:21,0:27:7.73:546,0,8	0/0:19,0:19:42.06:0,42,991	0/0:17,0:17:32.93:0,33,469	1/1:17,0:16:21.39:306,21,0	0/1:13,0:13:6.06:21,0,6	1/1:18,17:40:7.76:51,8,0	0/0:24,0:23:23.81:0,24,424	0/1:13,0:19:25.42:111,0,25	0/1:18,0:21:40.11:136,0,40	1/1:17,0:23:13.23:214,13,0	1/1:1,28:39:7.37:2176,7,0	1/1:8,0:13:15.49:378,15,0	0/1:13,0:13:10.38:111,0,10
chr10	88262109	.	TTC	T	4967.14	PASS	AB=0.946;AC=24;AF=0.429;AN=56;BaseQRankSum=8.222;DP=565;FS=0.774;HRun=0;HaplotypeScore=138.4884;InbreedingCoeff=0.8582;MQ=58.22;MQ0=1;MQRankSum=-3.193;QD=21.05;ReadPosRankSum=1.335;VQSLOD=4.9492;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:84.27:0,84,1357	0/0:14,0:14:35.61:0,36,557	0/1:18,1:18:10.85:11,0,456	0/0:17,0:14:26.67:0,27,378	1/1:7,10:18:29.80:355,30,0	0/0:18,0:18:42.13:0,42,656	0/0:26,0:26:54.18:0,54,880	0/0:26,0:26:60.19:0,60,929	1/1:1,12:14:35.90:409,36,0	0/0:34,0:34:78.25:0,78,1243	0/0:13,0:13:33.11:0,33,531	0/0:28,0:28:54:0,54,832	1/1:1,18:20:54:657,54,0	0/0:25,1:26:28.36:0,28,998	1/1:3,15:17:42.02:508,42,0	1/1:6,19:24:51.16:643,51,0	0/0:14,0:14:36.12:0,36,598	0/0:16,0:16:42.14:0,42,698	1/1:5,7:12:20.98:217,21,0	1/1:2,8:10:23.91:303,24,0	0/1:30,2:32:24.49:24,0,682	0/0:22,0:22:45.15:0,45,748	1/1:5,8:13:23.84:281,24,0	1/1:1,14:15:36.12:454,36,0	1/1:3,18:21:46.10:541,46,0	0/0:29,0:29:62.68:0,63,910	1/1:4,15:19:45.02:565,45,0	0/0:13,0:13:36.12:0,36,598
chr10	88262585	.	T	TTC	10289.01	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-9.793;DP=525;FS=6.246;HRun=0;HaplotypeScore=53.0078;InbreedingCoeff=0.9930;MQ=46.37;MQ0=46;MQRankSum=-2.062;QD=37.14;ReadPosRankSum=-0.833;VQSLOD=6.4205;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:29:80.18:0,80,996	0/0:8,0:7:21:0,21,250	0/0:12,0:9:27.06:0,27,343	0/0:6,0:5:14.26:0,14,162	1/1:4,19:23:15.69:865,16,0	0/0:22,0:20:57.04:0,57,725	0/0:24,0:23:63.08:0,63,810	1/1:5,18:19:56.96:817,57,0	1/1:3,20:21:50.96:850,51,0	0/0:21,0:19:56.04:0,56,708	0/0:19,0:16:39.05:0,39,517	0/0:17,0:15:38.39:0,38,522	1/1:2,10:11:30:507,30,0	0/0:26,0:23:63.14:0,63,853	1/1:3,10:13:20.96:430,21,0	1/1:1,17:17:45.15:807,45,0	0/0:24,0:20:54.10:0,54,702	0/0:17,0:16:45.08:0,45,586	1/1:2,11:13:38.77:594,39,0	1/1:1,19:17:39.08:671,39,0	1/1:3,12:15:38.81:596,39,0	0/0:19,0:18:54.03:0,54,684	1/1:4,14:14:39.13:709,39,0	1/1:1,13:16:45.15:769,45,0	1/1:0,6:6:18.02:292,18,0	1/1:3,15:18:50.97:759,51,0	1/1:2,22:24:51.07:889,51,0	1/1:0,15:17:42.13:735,42,0
chr10	88265611	.	GA	G	15538.95	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=8.827;DP=599;FS=0.346;HRun=2;HaplotypeScore=59.3406;InbreedingCoeff=0.9890;MQ=96.67;MQ0=0;MQRankSum=-5.433;QD=34.84;ReadPosRankSum=4.076;VQSLOD=5.0694;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.15:0,75,968	0/0:14,0:14:42.13:0,42,602	0/0:28,0:28:78.26:0,78,1128	0/0:28,0:28:80.59:0,81,1097	1/1:0,28:28:78.25:1005,78,0	1/1:1,22:23:54.18:700,54,0	1/1:0,19:19:48.16:621,48,0	1/1:0,29:29:87.26:1100,87,0	1/1:0,28:28:75.24:972,75,0	0/0:18,0:18:51.17:0,51,755	0/0:16,0:16:48.15:0,48,690	1/1:0,25:25:54.18:700,54,0	1/1:0,14:14:39.13:506,39,0	1/1:0,18:18:48.16:622,48,0	1/1:0,26:26:69.22:895,69,0	1/1:0,23:23:69.22:894,69,0	0/0:24,0:24:72.24:0,72,1051	1/1:0,4:4:9.03:117,9,0	1/1:0,16:16:48.15:608,48,0	1/1:0,22:22:60.12:746,60,0	1/1:0,27:27:75.24:972,75,0	1/1:0,20:20:60.20:778,60,0	1/1:0,27:27:68.91:894,69,0	1/1:0,11:11:24.08:311,24,0	1/1:1,16:17:42.14:542,42,0	1/1:0,30:30:90.22:1118,90,0	1/1:0,27:27:78.25:1011,78,0	1/1:0,12:12:33.11:427,33,0
chr10	88266953	.	GCTCT	G	674.19	PASS	AB=0.902;AC=16;AF=0.348;AN=46;BaseQRankSum=-0.962;DP=488;FS=5.597;HRun=0;HaplotypeScore=99.2761;InbreedingCoeff=0.3418;MQ=68.43;MQ0=12;MQRankSum=0.752;QD=4.89;ReadPosRankSum=1.960;VQSLOD=1.7030;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,6:21:0:0,0,0	1/1:4,3:7:8.99:112,9,0	0/0:25,0:18:0.30:0,0,0	./.	0/0:15,0:15:6:0,6,69	0/1:12,0:12:34.05:45,0,34	1/1:17,0:16:3.01:34,3,0	./.	0/0:18,0:18:6.02:0,6,87	./.	0/1:10,0:11:6.42:40,0,6	1/1:16,0:16:14.23:116,14,0	0/0:12,0:12:6.02:0,6,99	./.	0/0:13,0:13:12.04:0,12,187	0/0:22,0:21:9.03:0,9,171	1/1:12,5:16:12.04:185,12,0	0/1:12,0:12:17:67,0,17	0/0:18,0:16:9.03:0,9,179	0/0:19,0:19:9.03:0,9,153	./.	1/1:17,0:17:3:28,3,0	0/0:21,0:21:12:0,12,164	0/0:8,0:7:3.01:0,3,66	0/0:24,0:22:5.31:0,5,98	0/1:12,6:18:27.73:147,0,28	0/0:24,0:24:21.07:0,21,328	1/1:6,4:10:3.01:46,3,0
chr10	88266990	.	C	CTCTCTCTT	2835.39	PASS	AB=0.824;AC=19;AF=0.339;AN=56;BaseQRankSum=0.047;DP=499;FS=1.411;HRun=0;HaplotypeScore=111.6015;InbreedingCoeff=0.3579;MQ=55.02;MQ0=11;MQRankSum=-0.156;QD=11.03;ReadPosRankSum=-1.528;VQSLOD=2.4101;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:21.98:0,22,172	0/0:7,0:7:12.01:0,12,173	0/0:23,0:6:8.92:0,9,65	0/0:29,0:11:5.44:0,5,167	1/1:5,0:25:29.74:261,30,0	0/1:15,0:14:7.87:8,0,47	0/1:13,0:13:2.97:3,0,78	0/0:23,0:20:52.20:0,52,455	0/1:5,12:19:8.99:140,0,9	0/0:17,0:17:36.84:0,37,322	0/0:14,0:13:21.37:0,21,204	0/0:16,0:16:1.58:0,2,152	0/1:5,0:15:7.97:198,0,8	0/1:20,0:20:6.97:7,0,36	0/1:4,14:22:22.80:244,0,23	0/1:20,0:19:0.10:229,0,0	0/0:18,0:17:32.75:0,33,397	0/0:8,0:8:9.37:0,9,156	0/1:13,0:11:0.20:142,0,0	1/1:16,0:16:37.82:392,38,0	0/0:18,0:18:21.90:0,22,172	0/0:17,0:17:2.80:0,3,50	1/1:19,0:19:35.33:454,35,0	0/1:6,0:10:8.55:9,0,53	1/1:3,0:15:12.38:175,12,0	0/0:21,0:21:44.78:0,45,458	1/1:2,26:32:20.64:750,21,0	0/0:10,0:10:12.88:0,13,137
chr10	88266994	.	CTCTCTCTA	C	638.07	PASS	AB=0.792;AC=6;AF=0.111;AN=54;BaseQRankSum=1.415;DP=477;FS=6.746;HRun=0;HaplotypeScore=108.4764;InbreedingCoeff=0.5688;MQ=56.96;MQ0=10;MQRankSum=-2.284;QD=11.00;ReadPosRankSum=0.453;VQSLOD=1.7232;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:17:30.01:0,30,301	0/0:7,0:7:20.85:0,21,248	0/0:22,0:6:11.06:0,11,111	0/0:32,0:15:33.74:0,34,315	0/0:22,0:22:33.06:0,33,467	0/1:4,10:13:83:148,0,83	1/1:8,0:9:14.95:184,15,0	0/0:26,0:23:65.97:0,66,593	0/0:17,0:17:20.97:0,21,304	0/0:15,0:15:42.05:0,42,504	0/0:14,0:13:32.89:0,33,510	1/1:0,17:17:15.05:420,15,0	0/0:15,0:15:12.48:0,12,244	./.	0/0:20,0:20:15.05:0,15,413	0/0:19,0:18:38.98:0,39,561	0/0:17,0:17:44.97:0,45,528	0/0:8,0:8:10.67:0,11,115	0/0:13,0:11:32.99:0,33,659	0/0:16,0:16:45.81:0,46,643	0/0:15,0:15:32.39:0,32,295	0/1:18,0:18:17.19:17,0,19	0/0:18,0:18:35.95:0,36,639	0/0:13,0:12:17.98:0,18,266	0/0:16,0:14:14.94:0,15,304	0/0:20,0:20:57.15:0,57,969	0/0:29,0:29:21.07:0,21,755	0/0:7,0:7:12.01:0,12,119
chr10	88266996	.	CTCTCTA	C	487	PASS	AB=1.000;AC=8;AF=0.148;AN=54;BaseQRankSum=2.312;DP=456;FS=10.625;HRun=0;HaplotypeScore=97.1410;InbreedingCoeff=0.5833;MQ=58.44;MQ0=10;MQRankSum=-3.238;QD=7.73;ReadPosRankSum=0.925;VQSLOD=1.1875;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:14:21:0,21,184	0/0:6,0:6:6.78:0,7,95	0/0:23,0:7:11.06:0,11,111	0/0:33,0:16:37.21:0,37,346	0/0:21,0:22:33.05:0,33,451	0/1:14,0:13:56.90:101,0,57	1/1:9,0:9:17.94:180,18,0	0/0:24,0:21:55:0,55,507	0/0:15,0:15:17.98:0,18,237	0/0:14,0:14:35.98:0,36,326	0/0:13,0:12:29.55:0,30,320	1/1:17,0:17:15.05:256,15,0	0/0:13,0:13:9:0,9,155	./.	0/0:21,0:21:18.04:0,18,319	0/0:19,0:18:38.98:0,39,464	0/0:16,0:16:41.07:0,41,305	0/1:8,0:8:23.34:23,0,36	0/0:13,0:11:32.99:0,33,544	0/0:16,0:16:45.35:0,45,567	0/0:11,0:11:18.85:0,19,154	1/1:1,13:15:2.89:67,3,0	0/0:16,0:16:35.92:0,36,525	0/0:14,0:13:20.93:0,21,246	0/0:15,0:13:14.94:0,15,262	0/0:19,0:19:53.94:0,54,595	0/0:28,0:28:24.07:0,24,612	0/0:8,0:8:14.83:0,15,116
chr10	88266998	.	CTCTA	C	579.87	PASS	AB=0.975;AC=13;AF=0.241;AN=54;BaseQRankSum=3.292;DP=456;FS=11.196;HRun=0;HaplotypeScore=87.6090;InbreedingCoeff=0.3994;MQ=58.45;MQ0=10;MQRankSum=-2.356;QD=5.22;ReadPosRankSum=1.193;VQSLOD=1.0967;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:21:0,21,184	0/1:6,1:7:55.54:56,0,82	0/0:23,0:7:11.06:0,11,111	0/0:33,0:16:37.28:0,37,348	0/0:24,0:24:39.03:0,39,474	0/1:14,0:13:15.92:73,0,16	1/1:10,0:10:20.94:194,21,0	0/0:25,0:22:63.02:0,63,579	0/0:15,0:15:17.94:0,18,185	0/0:14,0:14:41.98:0,42,381	0/0:13,0:12:4.44:0,4,213	1/1:17,0:17:15.02:186,15,0	0/0:13,0:13:9:0,9,114	./.	0/0:18,0:18:14.99:0,15,205	0/0:20,0:19:38.87:0,39,388	0/1:14,0:14:57.76:58,0,171	1/1:2,6:8:4.71:121,5,0	0/0:13,0:11:32.73:0,33,433	0/0:16,0:16:42.38:0,42,474	0/0:11,0:11:20.96:0,21,178	1/1:14,0:15:3.01:35,3,0	0/0:15,0:15:32.80:0,33,416	0/0:14,0:13:17.97:0,18,202	0/0:16,0:14:20.92:0,21,261	0/1:18,0:18:11.32:11,0,311	0/0:30,0:30:30.06:0,30,521	0/1:8,0:8:4.42:4,0,87
chr10	88267195	.	CTTA	C	469.78	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=1.769;DP=413;FS=0.000;HRun=0;HaplotypeScore=71.9180;InbreedingCoeff=0.7152;MQ=40.40;MQ0=40;MQRankSum=-1.828;QD=4.56;ReadPosRankSum=3.156;VQSLOD=1.5294;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:30.57:0,31,390	0/0:5,0:5:14.96:0,15,181	0/0:13,0:1:3.01:0,3,50	0/1:25,0:4:0.04:0,0,98	0/0:8,0:8:18.01:0,18,208	0/0:0,16:16:0:0,0,0	1/1:0,15:15:6.02:68,6,0	1/1:8,0:4:9.02:98,9,0	0/0:16,0:15:29.80:0,30,333	0/0:11,0:10:30.10:0,30,471	0/0:7,0:7:15.01:0,15,171	1/1:1,0:12:9.65:83,10,0	0/0:16,0:14:26.80:0,27,294	1/1:0,0:18:6.02:74,6,0	0/0:22,0:21:44.59:0,45,516	0/0:17,0:17:32.78:0,33,337	0/0:34,0:33:61.71:0,62,563	1/1:0,0:12:6.02:74,6,0	0/0:12,0:9:27.09:0,27,396	0/0:3,0:3:9.03:0,9,113	0/0:0,32:32:0.47:0,0,1	0/0:0,11:11:0:0,0,0	0/0:4,0:4:0:0,0,0	0/0:41,0:40:38.80:0,39,620	0/0:10,0:10:18.02:0,18,209	1/1:0,8:8:12.03:144,12,0	0/0:19,0:18:26.98:0,27,376	1/1:2,0:2:6.02:92,6,0
chr10	88267197	.	TAGCAGCAGC	T	1346.22	PASS	AB=1.000;AC=19;AF=0.864;AN=22;BaseQRankSum=-0.014;DP=407;FS=1.328;HRun=0;HaplotypeScore=83.3051;InbreedingCoeff=0.4940;MQ=40.18;MQ0=40;MQRankSum=-4.920;QD=6.73;ReadPosRankSum=0.723;VQSLOD=1.7359;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	./.	1/1:8,8:15:12.04:323,12,0	./.	./.	1/1:14,0:12:12.03:184,12,0	1/1:10,5:13:6.02:162,6,0	1/1:19,0:18:6.02:125,6,0	1/1:10,0:20:6.22:14,6,0	1/1:8,8:16:12.04:323,12,0	0/0:14,0:33:42.14:0,42,805	1/1:12,0:12:6.02:125,6,0	./.	./.	0/1:32,0:32:0.02:0,0,0	./.	./.	1/1:26,11:36:2.97:20,3,0	./.	./.	1/1:11,7:17:6.02:162,6,0	./.
chr10	88268396	.	A	AC	6185.83	PASS	AB=0.722;AC=41;AF=0.732;AN=56;BaseQRankSum=-4.511;DP=543;FS=2.999;HRun=8;HaplotypeScore=74.1916;InbreedingCoeff=0.8114;MQ=83.26;MQ0=0;MQRankSum=-2.018;QD=16.07;ReadPosRankSum=1.002;VQSLOD=5.0659;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:93.04:0,93,850	0/0:16,0:16:45.02:0,45,412	0/0:16,0:17:34.66:0,35,307	0/0:19,0:19:18.71:0,19,200	1/1:1,21:22:45.56:506,46,0	1/1:2,0:6:5.68:29,6,0	1/1:6,1:22:31.24:159,31,0	1/1:8,0:12:9.69:61,10,0	1/1:4,18:22:14.67:423,15,0	0/0:27,0:27:64.81:0,65,572	0/0:13,0:13:33.01:0,33,302	1/1:5,0:14:7.03:45,7,0	1/1:3,21:24:26.70:561,27,0	1/1:8,0:11:5.47:27,5,0	1/1:1,21:22:29.57:596,30,0	1/1:4,19:23:20.68:492,21,0	0/0:25,0:25:62.99:0,63,571	1/1:9,1:20:31.25:158,31,0	1/1:12,15:27:20.70:492,21,0	1/1:4,17:21:44.96:457,45,0	1/1:19,0:23:32.66:188,33,0	1/1:13,0:14:6.16:47,6,0	1/1:2,10:12:15.31:174,15,0	1/1:6,24:30:41.74:734,42,0	1/1:4,17:21:36.11:415,36,0	0/1:8,0:13:14.40:42,0,14	1/1:4,18:22:48.08:552,48,0	1/1:1,0:4:5.68:29,6,0
chr10	88269529	.	T	TA	18332.10	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-7.142;DP=1310;FS=1.202;HRun=1;HaplotypeScore=159.0450;InbreedingCoeff=0.9999;MQ=59.98;MQ0=5;MQRankSum=3.393;QD=37.34;ReadPosRankSum=3.114;VQSLOD=4.4929;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:46:99:0,119,1504	0/0:25,0:25:75.24:0,75,974	0/0:47,0:29:66.42:0,66,769	0/0:48,0:31:83.74:0,84,1017	1/1:3,36:39:96.33:1438,96,0	0/0:34,0:33:84.26:0,84,1075	0/0:35,0:36:99:0,105,1362	0/0:46,0:45:99:0,123,1598	1/1:1,56:57:99:2088,141,0	0/0:68,0:68:99:0,196,2506	0/0:20,0:20:60.17:0,60,750	0/0:51,0:52:99:0,138,1775	1/1:3,43:46:99:1685,114,0	0/0:47,0:47:99:0,138,1774	1/1:0,58:58:99:2270,153,0	1/1:2,60:62:99:2294,154,0	0/0:34,0:35:86.83:0,87,1163	0/0:28,0:31:31.29:0,31,813	1/1:1,25:26:72.24:1079,72,0	1/1:0,29:29:81.23:1189,81,0	0/0:120,0:121:99:0,318,4139	0/0:52,0:52:99:0,150,1947	1/1:0,40:40:93.32:1395,93,0	1/1:9,51:62:87.62:2259,88,0	1/1:1,30:31:78.26:1151,78,0	0/0:65,0:65:99:0,193,2492	1/1:2,38:40:99:1484,99,0	0/0:41,0:41:99:0,123,1591
chr10	88270643	.	TC	T	9128.52	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.554;DP=678;FS=9.846;HRun=3;HaplotypeScore=65.1239;InbreedingCoeff=0.9974;MQ=84.38;MQ0=0;MQRankSum=-1.845;QD=33.44;ReadPosRankSum=2.653;VQSLOD=5.0410;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.27:0,96,1308	0/0:7,0:7:15.05:0,15,215	0/0:20,0:20:51.16:0,51,679	0/0:21,0:21:57.18:0,57,797	1/1:1,24:25:69.18:839,69,0	0/0:27,0:27:78.24:0,78,1101	0/0:35,0:35:99:0,99,1380	0/0:25,0:25:69.17:0,69,919	1/1:1,29:30:84.26:1041,84,0	0/0:27,0:27:78.15:0,78,1060	0/0:8,0:8:24.07:0,24,328	0/0:21,0:21:63.20:0,63,889	1/1:0,29:29:81.25:1004,81,0	0/0:23,0:23:66.22:0,66,950	1/1:0,33:33:84.15:1041,84,0	1/1:1,26:27:72.23:893,72,0	0/0:24,0:24:72.24:0,72,1036	0/0:26,0:26:78.25:0,78,1105	1/1:3,21:24:60.17:730,60,0	1/1:0,16:16:47.94:570,48,0	0/0:41,0:41:99:0,117,1646	0/0:18,0:18:54.17:0,54,758	1/1:1,13:14:36.11:446,36,0	1/1:1,37:38:99:1264,102,0	1/1:0,20:20:54.17:669,54,0	0/0:25,0:24:69.22:0,69,976	1/1:1,16:17:51.16:632,51,0	0/0:23,0:23:66.22:0,66,950
chr10	88271073	.	CTTTAT	C	7683.28	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=11.642;DP=507;FS=0.377;HRun=0;HaplotypeScore=126.8130;InbreedingCoeff=0.9973;MQ=73.24;MQ0=1;MQRankSum=-13.935;QD=49.57;ReadPosRankSum=-3.774;VQSLOD=3.9748;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,144,4282	0/0:15,0:15:45.15:0,45,1264	0/0:20,0:19:42.14:0,42,1242	0/0:10,0:9:23.91:0,24,650	1/1:1,16:17:32.97:547,33,0	0/0:12,0:12:27.09:0,27,837	0/0:14,0:14:30.10:0,30,829	0/0:27,0:27:75.25:0,75,2231	1/1:3,12:15:42.14:825,42,0	0/0:22,0:22:63.21:0,63,1813	0/0:21,0:21:60.19:0,60,1762	0/0:16,0:16:39.12:0,39,1118	1/1:1,13:14:39.13:774,39,0	0/0:17,0:17:42.14:0,42,1227	1/1:1,9:10:24.08:482,24,0	1/1:1,8:9:24.08:491,24,0	0/0:27,0:27:81.28:0,81,2433	0/0:27,0:27:57.20:0,57,1757	1/1:1,16:17:45.11:889,45,0	1/1:1,13:14:38.83:732,39,0	0/0:20,0:19:36.12:0,36,1030	0/0:16,0:16:45.11:0,45,1221	1/1:0,11:10:27.09:494,27,0	1/1:3,14:17:31.71:636,32,0	1/1:0,10:10:27.09:541,27,0	0/0:23,0:23:69.22:0,69,2007	1/1:2,19:21:63.22:1272,63,0	0/0:9,0:9:18.06:0,18,530
chr10	88271104	.	A	ATGTGTGTGTGTG	5630.28	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=8.108;DP=654;FS=0.432;HRun=0;HaplotypeScore=274.1721;InbreedingCoeff=0.6587;MQ=55.18;MQ0=10;MQRankSum=-11.658;QD=20.33;ReadPosRankSum=-0.288;VQSLOD=3.2971;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,149,3668	0/0:14,0:14:36.08:0,36,871	0/0:35,0:18:45.60:0,46,772	0/0:39,0:19:16.07:0,16,536	1/1:26,0:25:5.90:299,6,0	0/0:11,0:11:18.91:0,19,235	0/0:22,0:22:8.61:0,9,572	0/1:27,0:27:98.94:99,0,407	1/1:12,4:18:26.99:917,27,0	0/0:29,0:29:84.04:0,84,2068	0/0:21,0:21:57.10:0,57,1314	0/0:19,0:19:29.42:0,29,369	1/1:16,1:16:25.80:772,26,0	0/0:29,0:29:48.96:0,49,711	1/1:17,3:20:18.03:752,18,0	1/1:13,2:16:30:825,30,0	0/0:33,0:33:99:0,99,2878	0/0:34,0:34:36.20:0,36,691	1/1:24,0:23:46.31:683,46,0	1/1:15,0:16:8.96:98,9,0	0/1:26,0:24:0.82:1,0,221	0/0:25,0:25:43.81:0,44,430	0/0:11,0:10:0.94:0,1,1	1/1:21,1:23:8.74:179,9,0	1/1:16,2:20:3.01:176,3,0	0/1:19,0:18:9.88:10,0,535	1/1:15,1:18:32.35:807,32,0	0/1:5,0:5:12.32:12,0,38
chr10	88271106	.	A	ATGTG	8408.77	PASS	AB=0.833;AC=40;AF=0.714;AN=56;BaseQRankSum=1.309;DP=664;FS=0.000;HRun=0;HaplotypeScore=175.4745;InbreedingCoeff=0.7373;MQ=54.52;MQ0=10;MQRankSum=-4.246;QD=18.24;ReadPosRankSum=-0.333;VQSLOD=4.0428;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:56:99:0,108,1340	0/0:14,0:14:29.40:0,29,388	0/1:35,0:18:4.16:4,0,221	0/0:40,0:19:16.97:0,17,216	1/1:27,0:25:3.01:52,3,0	1/1:4,6:12:14.37:243,14,0	1/1:6,15:25:41.29:882,41,0	1/1:28,0:28:52.59:430,53,0	1/1:18,0:18:24.36:305,24,0	0/0:30,0:31:59.71:0,60,811	0/0:19,0:19:36.04:0,36,494	1/1:5,15:21:29.59:668,30,0	1/1:18,0:17:20.93:248,21,0	1/1:8,19:30:53.37:1136,53,0	1/1:20,0:20:15.05:253,15,0	1/1:16,0:15:26.95:341,27,0	0/0:32,0:32:81.19:0,81,1230	1/1:11,24:36:57.20:1345,57,0	1/1:22,0:21:29.93:210,30,0	1/1:11,0:11:8.99:74,9,0	1/1:9,18:29:12.04:272,12,0	1/1:7,17:26:30.10:733,30,0	0/0:11,0:11:0.47:0,0,1	1/1:23,0:23:5.51:68,6,0	1/1:20,0:20:8.93:91,9,0	0/1:10,2:19:16.21:491,0,16	1/1:17,0:17:26.85:355,27,0	1/1:1,2:5:12.03:206,12,0
chr10	88271203	.	A	AG	9678.79	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-9.015;DP=685;FS=3.904;HRun=1;HaplotypeScore=71.3763;InbreedingCoeff=0.9998;MQ=72.18;MQ0=0;MQRankSum=-1.725;QD=40.67;ReadPosRankSum=2.338;VQSLOD=5.6245;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,166,2125	0/0:9,0:9:27.09:0,27,351	0/0:22,0:22:63.07:0,63,755	0/0:22,0:22:36.04:0,36,718	1/1:2,14:17:51.17:740,51,0	0/0:23,0:23:63.19:0,63,802	0/0:38,0:38:99:0,105,1363	0/0:24,0:24:63.18:0,63,773	1/1:0,22:22:57.19:854,57,0	0/0:20,0:20:57.19:0,57,740	0/0:23,0:22:63.18:0,63,790	0/0:20,0:20:57.19:0,57,740	1/1:0,20:20:57.12:804,57,0	0/0:18,0:18:54.18:0,54,701	1/1:0,21:21:60.16:874,60,0	1/1:0,18:18:51.13:739,51,0	0/0:28,0:28:78.25:0,78,1012	0/0:21,0:21:60.20:0,60,779	1/1:3,12:15:33.06:450,33,0	1/1:0,14:14:42.14:629,42,0	0/0:48,0:48:99:0,135,1737	0/0:13,0:13:36.10:0,36,453	1/1:1,17:18:47.65:691,48,0	1/1:1,56:57:99:2370,160,0	1/1:0,17:17:51.17:764,51,0	0/0:25,0:25:75.24:0,75,971	1/1:0,19:18:51.17:764,51,0	0/0:37,0:37:99:0,111,1441
chr10	88272094	.	TTCTC	T	1053.98	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.781;DP=510;FS=12.305;HRun=0;HaplotypeScore=132.1400;InbreedingCoeff=0.9091;MQ=61.92;MQ0=7;MQRankSum=-4.456;QD=13.87;ReadPosRankSum=-3.227;VQSLOD=1.8908;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:81.15:0,81,2081	0/0:7,0:7:18.06:0,18,442	0/0:24,0:13:15.44:0,15,613	0/0:24,0:14:35.83:0,36,722	0/0:17,0:17:15.04:0,15,281	1/1:3,10:13:23.95:265,24,0	1/1:4,13:16:21.07:290,21,0	0/0:28,0:27:72.25:0,72,1867	0/0:14,0:14:9.03:0,9,179	0/0:13,0:13:39.13:0,39,944	0/0:15,0:15:33.10:0,33,774	1/1:2,9:11:20.94:243,21,0	0/0:20,0:20:21.07:0,21,452	1/1:4,15:19:18.02:271,18,0	0/0:20,0:19:15.04:0,15,337	0/0:24,0:23:39.60:0,40,963	0/0:26,0:26:69.24:0,69,1785	1/1:0,5:4:6.02:105,6,0	0/0:24,0:23:60.21:0,60,1458	0/0:12,0:12:18.06:0,18,460	0/0:18,0:18:39.10:0,39,873	1/1:3,8:11:3.01:54,3,0	0/0:15,0:14:15.05:0,15,326	0/0:26,0:26:30.09:0,30,689	0/0:18,0:18:27.09:0,27,618	0/0:22,0:21:60.21:0,60,1245	0/0:18,0:18:45.15:0,45,1100	0/0:17,0:16:36.12:0,36,697
chr10	88272106	.	GGTGTGTGTGT	G	3122.62	PASS	AB=0.849;AC=29;AF=0.630;AN=46;BaseQRankSum=6.729;DP=464;FS=0.000;HRun=0;HaplotypeScore=151.6462;InbreedingCoeff=0.6682;MQ=58.48;MQ0=22;MQRankSum=-5.624;QD=12.39;ReadPosRankSum=3.897;VQSLOD=2.1250;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:64.07:0,64,2370	0/0:7,0:7:18.05:0,18,577	0/0:22,0:11:6.02:0,6,149	0/0:23,0:13:6.01:0,6,74	1/1:8,4:12:3.01:90,3,0	1/1:5,1:10:3.01:39,3,0	./.	0/1:24,0:23:1.79:2,0,55	1/1:1,10:12:6.02:157,6,0	0/0:19,0:16:30.10:0,30,1197	0/0:16,0:16:30.10:0,30,1215	./.	1/1:6,13:19:12.04:317,12,0	1/1:8,0:16:6.02:138,6,0	./.	1/1:13,8:22:8:209,8,0	0/0:27,0:25:51.15:0,51,1766	1/1:3,0:4:6.02:150,6,0	1/1:18,0:18:12.04:315,12,0	./.	0/1:12,0:9:0:0,0,0	./.	1/1:7,4:13:5.48:172,5,0	0/1:8,13:21:0:0,0,0	1/1:11,0:13:11.91:207,12,0	1/1:10,0:18:33.11:798,33,0	1/1:11,0:12:6.01:109,6,0	1/1:5,0:11:24.08:580,24,0
chr10	88272174	.	AGAGAGT	A	1534.60	PASS	AB=1.000;AC=34;AF=0.630;AN=54;BaseQRankSum=0.618;DP=603;FS=4.323;HRun=0;HaplotypeScore=133.5487;InbreedingCoeff=0.0397;MQ=38.18;MQ0=77;MQRankSum=-3.091;QD=3.18;ReadPosRankSum=-3.832;VQSLOD=0.5772;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:38:43.76:0,44,916	0/0:7,0:4:9.83:0,10,147	0/1:72,0:4:5.10:5,0,11	0/1:84,0:7:4.64:5,0,42	./.	1/1:14,3:16:2.67:19,3,0	1/1:23,2:24:0:2,0,0	0/1:20,0:20:8.76:249,0,9	1/1:13,0:12:5.60:44,6,0	0/0:17,0:17:20.58:0,21,300	0/1:23,0:21:15.12:15,0,573	1/1:9,0:9:2.73:25,3,0	0/1:17,0:17:3.66:140,0,4	1/1:12,0:11:1.26:47,1,0	1/1:18,0:16:5.75:52,6,0	0/1:17,0:15:49.60:50,0,168	0/0:25,0:22:4.35:0,4,466	1/1:7,0:5:5.96:45,6,0	0/1:17,0:15:89.99:148,0,90	1/1:12,0:12:11.99:100,12,0	1/1:10,0:10:5.07:49,5,0	1/1:19,3:21:0.42:3,0,0	0/1:19,0:18:24.48:37,0,24	1/1:22,0:21:26.96:273,27,0	0/0:12,1:12:0:0,0,0	0/1:20,0:19:46.95:200,0,47	0/1:19,0:18:86.71:87,0,119	1/1:7,0:6:9.63:95,10,0
chr10	88272176	.	AGAGT	A	1982.49	PASS	AB=0.946;AC=39;AF=0.722;AN=54;BaseQRankSum=0.917;DP=606;FS=6.497;HRun=0;HaplotypeScore=121.3189;InbreedingCoeff=-0.0360;MQ=38.01;MQ0=79;MQRankSum=-1.082;QD=3.42;ReadPosRankSum=-2.327;VQSLOD=1.5964;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:35:1.34:1,0,681	0/0:7,0:4:1.77:0,2,96	0/1:72,0:4:4.68:5,0,11	0/1:87,0:7:4.39:4,0,41	./.	1/1:10,6:15:2.67:19,3,0	0/1:18,5:22:0:0,0,1	0/1:20,0:20:5.57:251,0,6	1/1:12,1:12:8.84:61,9,0	0/1:17,0:17:74.15:74,0,228	0/1:23,0:21:0.94:1,0,429	1/1:5,4:9:2.86:26,3,0	1/1:15,0:15:23.35:208,23,0	1/1:10,2:11:11.31:77,11,0	1/1:15,3:16:8.97:72,9,0	0/1:20,0:18:57.61:58,0,72	0/1:24,0:21:51.37:51,0,252	1/1:7,1:6:5.96:45,6,0	0/1:17,1:16:25.71:174,0,26	1/1:13,0:13:14.97:123,15,0	1/1:9,2:11:5.45:49,5,0	1/1:18,4:21:2.26:18,2,0	1/1:20,0:19:15.16:112,15,0	1/1:20,2:21:26.96:272,27,0	0/1:2,10:11:0.10:0,0,0	0/1:20,0:19:26.42:176,0,26	0/1:19,0:18:26.99:144,0,27	1/1:5,2:6:13.48:103,13,0
chr10	88272178	.	AGT	A	2546.98	PASS	AB=0.975;AC=42;AF=0.778;AN=54;BaseQRankSum=1.911;DP=606;FS=7.375;HRun=0;HaplotypeScore=111.3089;InbreedingCoeff=0.3191;MQ=38.16;MQ0=81;MQRankSum=-3.727;QD=5.82;ReadPosRankSum=-2.480;VQSLOD=2.0496;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:4.77:0,5,476	0/1:7,0:4:20.84:21,0,69	0/1:76,0:4:4.59:5,0,11	0/0:90,0:7:3.39:0,3,52	./.	1/1:16,0:15:2.96:19,3,0	0/1:20,1:20:0:0,0,1	1/1:20,1:21:48.21:346,48,0	1/1:10,3:12:12.32:86,12,0	0/1:15,2:17:43.60:44,0,223	0/0:22,0:20:6.12:0,6,313	1/1:6,4:10:5.86:50,6,0	1/1:13,1:14:29.77:252,30,0	1/1:9,4:12:12.16:82,12,0	1/1:13,4:15:9.01:97,9,0	1/1:19,0:17:14.21:101,14,0	0/1:24,0:21:87.50:87,0,96	1/1:8,0:6:5.96:45,6,0	1/1:17,0:15:33.31:257,33,0	1/1:12,1:13:14.97:123,15,0	1/1:10,1:11:5.89:50,6,0	1/1:15,7:21:2.55:18,3,0	1/1:16,4:19:17.88:185,18,0	1/1:17,4:20:26.88:228,27,0	0/1:12,0:11:0:0,0,0	1/1:19,1:19:30.69:237,31,0	1/1:18,1:18:29.34:243,29,0	1/1:7,0:6:16.65:115,17,0
chr10	88272197	.	GAGAGAGAGAC	G	1146.59	PASS	AB=0.996;AC=17;AF=0.304;AN=56;BaseQRankSum=3.299;DP=651;FS=32.520;HRun=0;HaplotypeScore=144.9218;InbreedingCoeff=0.4563;MQ=41.01;MQ0=74;MQRankSum=-1.967;QD=4.68;ReadPosRankSum=-2.162;VQSLOD=0.7346;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:65.86:0,66,2145	0/0:8,0:7:21.07:0,21,428	0/1:96,0:9:0.35:0,0,143	0/0:121,0:9:12.40:0,12,122	0/0:17,0:17:15.04:0,15,307	1/1:9,4:12:2.47:37,2,0	1/1:22,0:21:3.81:27,4,0	0/1:20,0:20:99:105,0,166	0/0:12,0:11:15.05:0,15,271	0/0:16,0:15:42.14:0,42,1386	0/0:20,0:18:33.58:0,34,1135	1/1:11,0:11:11.41:218,11,0	0/0:13,0:13:36.12:0,36,846	1/1:9,1:10:9.03:186,9,0	0/0:17,0:14:15.05:0,15,377	0/0:19,0:17:30.07:0,30,932	0/0:24,0:21:41.68:0,42,1522	0/1:8,0:7:7.85:134,0,8	0/0:20,0:18:34.11:0,34,539	0/0:15,0:15:24.08:0,24,487	0/1:12,0:11:38.36:38,0,82	1/1:7,15:21:2.73:35,3,0	0/0:19,0:18:32.75:0,33,904	0/0:19,0:18:27.09:0,27,648	0/0:14,0:13:6.02:0,6,100	0/1:20,0:18:70.13:388,0,70	0/0:19,0:18:39.13:0,39,1319	1/1:9,0:9:5.89:143,6,0
chr10	88272207	.	C	CAG	1901.48	PASS	AB=0.600;AC=18;AF=0.321;AN=56;BaseQRankSum=-1.630;DP=607;FS=57.084;HRun=0;HaplotypeScore=94.1087;InbreedingCoeff=0.6232;MQ=43.69;MQ0=56;MQRankSum=-2.456;QD=13.49;ReadPosRankSum=-1.623;VQSLOD=1.3134;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:63.08:0,63,771	0/0:10,0:9:24.07:0,24,287	0/0:86,0:9:0.25:0,0,82	0/0:114,0:9:3.48:0,3,34	0/0:15,0:15:15.05:0,15,184	1/1:12,1:12:5.99:68,6,0	1/1:3,12:14:3.01:49,3,0	1/1:11,13:24:5.28:490,5,0	0/0:11,0:10:18.03:0,18,209	0/0:17,0:16:39.12:0,39,476	0/0:22,0:20:32.51:0,33,402	1/1:2,6:8:12.04:196,12,0	0/0:17,0:17:36.11:0,36,442	1/1:2,8:10:9.03:134,9,0	0/0:11,0:9:15.05:0,15,185	0/0:17,0:16:30.09:0,30,366	0/0:21,0:20:41.65:0,42,537	0/1:2,9:10:24.77:135,0,25	0/0:19,0:18:23.86:0,24,255	0/0:14,0:14:30.09:0,30,368	0/1:6,7:12:37.28:132,0,37	1/1:18,1:18:2.97:20,3,0	0/0:15,0:14:33:0,33,406	0/0:15,0:14:27.08:0,27,332	0/0:13,0:12:6.01:0,6,74	1/1:4,14:17:14.80:577,15,0	0/0:18,0:17:45.12:0,45,539	1/1:0,8:10:6.95:280,7,0
chr10	88272345	.	TTTCC	T	383.63	PASS	AB=1.000;AC=14;AF=0.292;AN=48;BaseQRankSum=2.469;DP=423;FS=7.605;HRun=0;HaplotypeScore=100.1904;InbreedingCoeff=0.5003;MQ=52.10;MQ0=4;MQRankSum=-1.096;QD=2.46;ReadPosRankSum=0.420;VQSLOD=1.3756;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,19:34:21.07:320,21,0	0/0:6,0:6:9.03:0,9,212	0/0:21,0:18:0:0,0,0	./.	./.	1/1:16,0:16:5.93:44,6,0	0/0:19,0:19:3.63:0,4,38	0/1:29,0:28:0:0,0,0	0/0:16,0:16:12.03:0,12,180	0/0:20,0:20:30.06:0,30,474	0/0:15,0:15:27.04:0,27,537	1/1:11,0:11:6:55,6,0	0/0:14,0:14:17.99:0,18,275	1/1:11,0:11:5.63:30,6,0	0/0:10,0:8:11.93:0,12,140	0/0:8,0:8:3.01:0,3,51	0/0:23,0:22:45.07:0,45,811	0/1:14,0:14:11.30:28,0,11	0/0:13,0:9:3.01:0,3,53	0/0:10,0:10:3.01:0,3,38	1/1:16,0:16:2.80:20,3,0	./.	0/0:14,0:14:6:0,6,58	0/0:14,0:14:2.84:0,3,14	0/0:13,0:13:12.04:0,12,184	1/1:25,0:24:2.29:27,2,0	./.	0/0:12,0:12:1.55:0,2,4
chr10	88272376	.	CCTTCCTTCCTTCCTTT	C	2457.97	PASS	AB=1.000;AC=20;AF=0.370;AN=54;BaseQRankSum=-0.245;DP=405;FS=0.481;HRun=0;HaplotypeScore=168.8849;InbreedingCoeff=-0.1378;MQ=50.92;MQ0=7;MQRankSum=1.643;QD=10.88;ReadPosRankSum=-4.947;VQSLOD=0.8076;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:56.82:0,57,1497	0/0:5,0:5:15.04:0,15,744	0/0:15,0:5:15:0,15,163	0/0:13,0:5:9.03:0,9,89	./.	0/1:16,0:16:83.51:84,0,111	0/1:24,0:24:65.60:425,0,66	1/1:6,16:20:43.52:391,44,0	0/1:18,0:18:40.95:41,0,672	0/0:21,0:21:63.13:0,63,2574	0/0:17,0:17:51.11:0,51,2195	0/1:10,0:10:35.33:97,0,35	0/0:13,0:13:18.05:0,18,947	0/1:10,0:10:26.49:399,0,26	0/0:8,0:8:6.08:0,6,671	0/1:9,0:9:13.05:13,0,444	0/0:34,0:33:99:0,102,4048	0/1:10,0:10:40.82:41,0,82	0/1:13,0:8:9.35:9,0,183	0/1:10,0:9:10.95:11,0,254	0/1:15,0:15:29.59:194,0,30	0/0:11,0:11:2.97:0,3,20	0/1:8,0:8:35.03:35,0,263	0/1:18,0:18:2.07:2,0,139	0/1:12,0:12:50.10:50,0,771	1/1:4,14:17:35.11:626,35,0	0/1:8,0:8:54.70:55,0,130	1/1:5,0:5:6.02:151,6,0
chr10	88272380	.	CCTTCCTTCCTTT	C	2748.21	PASS	AB=0.969;AC=28;AF=0.519;AN=54;BaseQRankSum=0.664;DP=404;FS=0.992;HRun=0;HaplotypeScore=139.4142;InbreedingCoeff=0.2007;MQ=52.41;MQ0=7;MQRankSum=1.062;QD=11.50;ReadPosRankSum=-5.492;VQSLOD=0.5177;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:53.80:0,54,947	0/0:5,0:5:15:0,15,567	0/0:16,0:5:14.99:0,15,140	0/0:15,0:7:11.51:0,12,119	1/1:8,0:8:2.94:18,3,0	1/1:4,13:17:6.02:207,6,0	1/1:25,0:25:53.68:569,54,0	1/1:19,0:17:39.76:324,40,0	0/1:18,0:18:65.36:65,0,458	0/0:24,0:24:69.12:0,69,2016	0/0:18,0:18:51.04:0,51,1641	1/1:2,7:9:6.02:218,6,0	0/1:13,0:13:3.94:4,0,601	1/1:10,0:10:26.68:354,27,0	0/0:8,0:8:6.08:0,6,465	0/1:10,0:10:44.89:45,0,309	0/0:34,0:33:99:0,102,3075	0/1:4,4:9:5.70:103,0,6	0/1:12,0:7:45.14:45,0,90	0/1:8,0:7:33.09:33,0,163	1/1:13,0:13:15.28:162,15,0	./.	0/1:10,0:10:71.16:71,0,143	0/1:16,0:16:39.87:40,0,51	0/1:12,0:12:73.43:73,0,493	1/1:18,0:17:35.66:442,36,0	0/1:7,0:7:75.93:76,0,84	1/1:5,0:5:6:81,6,0
chr10	88272388	.	CCTTT	C	2675.40	PASS	AB=1.000;AC=33;AF=0.611;AN=54;BaseQRankSum=2.473;DP=393;FS=8.440;HRun=0;HaplotypeScore=87.1171;InbreedingCoeff=0.2765;MQ=54.77;MQ0=7;MQRankSum=0.057;QD=10.06;ReadPosRankSum=-1.914;VQSLOD=1.7018;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:84.20:84,0,231	0/0:5,0:5:15:0,15,281	0/0:16,0:5:14.99:0,15,140	0/0:20,0:13:26.95:0,27,273	1/1:3,6:9:5.88:36,6,0	1/1:13,0:13:6:58,6,0	1/1:23,0:23:58.19:405,58,0	1/1:18,0:16:38.92:322,39,0	0/1:17,0:17:70.23:144,0,70	0/0:24,0:24:68.96:0,69,999	0/0:18,0:18:53.88:0,54,800	1/1:7,0:7:6.02:69,6,0	0/1:13,0:13:85.44:85,0,132	1/1:10,0:10:29.65:225,30,0	0/1:9,0:9:47.04:51,0,47	0/1:10,0:10:19.60:58,0,20	0/0:34,0:33:98.98:0,99,1472	0/1:5,0:5:0.76:30,0,1	0/1:10,0:6:14.37:98,0,14	0/1:8,0:7:2.34:73,0,2	1/1:17,0:17:30.80:247,31,0	./.	1/1:10,0:10:7.37:116,7,0	1/1:17,0:17:23.46:150,23,0	0/1:14,0:14:67.36:195,0,67	1/1:14,0:14:35.14:273,35,0	1/1:7,0:7:16.15:116,16,0	1/1:2,0:2:2.99:23,3,0
chr10	88274147	.	CTTT	C	4304.14	PASS	AB=0.652;AC=29;AF=0.518;AN=56;BaseQRankSum=6.147;DP=554;FS=0.399;HRun=15;HaplotypeScore=86.1947;InbreedingCoeff=0.8966;MQ=65.20;MQ0=1;MQRankSum=-2.616;QD=16.37;ReadPosRankSum=7.160;VQSLOD=3.5561;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:31:71.69:0,72,1076	0/0:11,0:11:27.07:0,27,448	0/0:25,0:18:39.37:0,39,555	0/0:13,0:9:17.93:0,18,209	1/1:5,11:18:20.72:215,21,0	0/0:15,0:16:33.09:0,33,539	0/0:22,0:29:76.43:0,76,1153	1/1:7,7:14:20.95:232,21,0	1/1:7,19:26:44.92:503,45,0	0/0:24,0:26:48.59:0,49,725	0/0:11,0:11:19.62:0,20,321	0/0:18,0:19:42.09:0,42,589	1/1:5,11:16:20.93:235,21,0	0/0:11,0:12:27.05:0,27,412	1/1:8,15:23:35.25:402,35,0	1/1:6,11:18:25.44:300,25,0	0/0:44,0:45:99:0,108,1772	0/0:29,0:32:80.33:0,80,1213	1/1:7,12:21:29.78:332,30,0	1/1:3,3:6:5.88:67,6,0	1/1:6,11:20:7.08:124,7,0	0/0:19,0:19:41.82:0,42,541	1/1:3,11:14:23.92:255,24,0	1/1:4,19:23:48.09:538,48,0	1/1:6,8:15:19.43:233,19,0	0/1:7,7:15:93.86:170,0,94	1/1:8,13:23:38.80:393,39,0	1/1:1,9:10:27.05:303,27,0
chr10	88275593	.	TTC	T	1445.42	PASS	AB=0.832;AC=20;AF=0.385;AN=52;BaseQRankSum=1.380;DP=559;FS=8.793;HRun=0;HaplotypeScore=84.7871;InbreedingCoeff=0.4317;MQ=66.66;MQ0=10;MQRankSum=0.731;QD=6.10;ReadPosRankSum=0.581;VQSLOD=1.8943;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:17:26.90:0,27,303	0/0:9,0:9:5.95:0,6,42	./.	0/0:46,0:19:2.50:0,2,10	0/1:13,1:13:14.99:15,0,154	0/0:14,0:24:21.02:0,21,227	0/0:18,0:27:12:0,12,105	0/1:30,0:30:10.74:11,0,22	1/1:8,5:14:11.86:113,12,0	0/0:19,0:19:10.78:0,11,263	0/0:19,0:19:10.46:0,10,277	0/0:22,2:24:0.03:0,0,392	1/1:8,5:14:8.86:80,9,0	0/0:16,0:16:30.04:0,30,398	0/1:10,4:15:30.18:98,0,30	0/1:14,7:21:3.85:117,0,4	0/0:19,0:19:16.36:0,16,266	0/0:17,0:18:20.86:0,21,155	0/1:19,1:21:17.75:50,0,18	1/1:25,3:28:11.40:247,11,0	./.	0/0:9,0:8:12.04:0,12,180	1/1:10,1:11:8.85:75,9,0	1/1:11,8:20:17.71:160,18,0	0/0:27,0:28:26:0,26,241	0/1:9,8:17:7.12:148,0,7	1/1:10,5:16:32.09:313,32,0	1/1:9,3:11:20.81:199,21,0
chr10	88275665	.	CTCTA	C	3444.78	PASS	AB=0.870;AC=32;AF=0.615;AN=52;BaseQRankSum=9.332;DP=502;FS=16.428;HRun=0;HaplotypeScore=116.3459;InbreedingCoeff=0.5746;MQ=70.43;MQ0=4;MQRankSum=-4.728;QD=10.76;ReadPosRankSum=-0.742;VQSLOD=2.1364;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:19:15.03:0,15,232	0/1:10,3:13:16.54:17,0,457	0/0:31,0:23:0:0,0,1	./.	0/1:13,0:13:17:153,0,17	0/0:24,0:24:42.13:0,42,908	0/0:10,0:10:12.01:0,12,191	1/1:21,0:21:5.97:45,6,0	1/1:16,0:16:17.98:176,18,0	0/1:9,9:18:37.39:319,0,37	1/1:4,13:17:15.05:233,15,0	0/0:17,0:17:27.09:0,27,614	1/1:18,0:18:12.03:126,12,0	0/0:13,0:13:21.07:0,21,491	1/1:17,0:17:27.06:279,27,0	1/1:15,0:15:18.01:171,18,0	1/1:6,18:25:10.11:443,10,0	0/0:18,0:18:33.01:0,33,614	1/1:18,0:18:18.24:149,18,0	0/1:22,0:22:13.94:169,0,14	./.	0/0:10,0:10:18.05:0,18,376	1/1:15,0:15:15.04:159,15,0	1/1:18,0:18:9.01:82,9,0	1/1:21,0:21:13.04:309,13,0	1/1:19,0:19:25.98:236,26,0	1/1:21,0:21:30.07:315,30,0	1/1:13,0:12:6.01:64,6,0
chr10	88275700	.	TATCTATCTATCC	T	1479.63	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=6.566;DP=493;FS=8.111;HRun=0;HaplotypeScore=168.2258;InbreedingCoeff=0.4916;MQ=56.79;MQ0=10;MQRankSum=-5.392;QD=8.22;ReadPosRankSum=0.560;VQSLOD=2.2454;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:42.08:0,42,1236	0/0:19,0:19:48.12:0,48,1793	0/0:16,0:8:24:0,24,221	0/0:9,0:5:15.01:0,15,154	0/0:18,0:18:11.92:0,12,495	0/0:21,0:21:60.18:0,60,2788	0/0:10,0:10:21.03:0,21,642	0/1:28,0:25:49.21:334,0,49	0/1:17,0:17:23.95:46,0,24	0/0:22,0:22:59.65:0,60,1380	0/0:21,0:21:38.98:0,39,694	0/0:17,0:17:48.09:0,48,1921	1/1:11,0:11:11.14:52,11,0	0/0:12,0:12:36.10:0,36,1640	1/1:20,1:21:28.36:237,28,0	0/0:16,0:15:4.53:0,5,340	0/0:31,0:31:42.98:0,43,1156	0/0:16,0:16:45.06:0,45,1855	0/1:18,0:17:99:184,0,130	0/0:20,0:20:33.03:0,33,710	./.	0/0:15,0:14:38.75:0,39,1404	1/1:15,0:15:13.98:66,14,0	1/1:0,13:13:9.01:334,9,0	0/0:24,0:24:42.13:0,42,994	0/1:23,0:23:94.78:254,0,95	1/1:20,0:20:28:134,28,0	0/1:14,0:14:15.35:18,0,15
chr10	88275704	.	TATCTATCC	T	5077.48	PASS	AB=0.921;AC=22;AF=0.407;AN=54;BaseQRankSum=3.251;DP=494;FS=4.047;HRun=0;HaplotypeScore=127.4174;InbreedingCoeff=0.8038;MQ=60.13;MQ0=8;MQRankSum=-5.551;QD=23.95;ReadPosRankSum=-1.202;VQSLOD=4.2833;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:48.03:0,48,890	0/0:18,0:18:48.08:0,48,1135	0/0:16,0:10:27.03:0,27,272	0/0:9,0:7:14.15:0,14,163	0/1:16,2:18:59.01:59,0,129	0/0:23,0:23:66.14:0,66,1973	0/0:8,0:8:21.02:0,21,436	1/1:28,0:25:59.66:500,60,0	1/1:1,16:17:17.99:437,18,0	0/0:22,0:22:31.15:0,31,670	0/0:22,0:22:41.96:0,42,388	0/0:18,0:18:51.08:0,51,1409	1/1:0,11:11:12.04:335,12,0	0/0:12,0:12:36.09:0,36,1155	1/1:1,21:22:30.03:751,30,0	0/1:15,1:15:66.41:66,0,74	0/0:32,0:32:59.90:0,60,553	0/0:16,0:16:45.03:0,45,1284	1/1:0,17:17:47.26:565,47,0	0/0:20,0:20:10.58:0,11,199	./.	0/0:14,0:13:38.75:0,39,990	1/1:0,18:18:15.04:420,15,0	1/1:13,0:13:9.03:193,9,0	0/0:25,0:25:38.31:0,38,289	1/1:3,19:22:56.24:744,56,0	1/1:0,20:20:30.10:837,30,0	1/1:1,9:10:6.02:168,6,0
chr10	88275708	.	TATCC	T	4671.23	PASS	AB=1.000;AC=31;AF=0.574;AN=54;BaseQRankSum=10.020;DP=492;FS=29.306;HRun=0;HaplotypeScore=98.8961;InbreedingCoeff=0.7327;MQ=61.64;MQ0=7;MQRankSum=-3.923;QD=14.24;ReadPosRankSum=3.155;VQSLOD=2.8531;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:45.02:0,45,548	0/0:18,0:18:19.35:0,19,583	0/0:16,0:11:26.20:0,26,299	0/0:8,0:7:14.15:0,14,163	1/1:3,15:18:16.32:297,16,0	0/0:24,0:24:66.10:0,66,1171	0/0:9,0:9:18.01:0,18,254	1/1:28,0:25:62.77:539,63,0	1/1:16,0:16:15.05:187,15,0	0/1:21,0:21:74.10:74,0,305	0/1:24,0:24:75.91:76,0,218	0/0:17,0:17:51.07:0,51,887	1/1:11,0:11:12.04:149,12,0	0/0:14,0:14:42.07:0,42,736	1/1:22,0:22:30.03:351,30,0	1/1:1,15:16:17.86:299,18,0	0/1:31,0:31:99:172,0,154	0/0:16,0:16:39.05:0,39,748	1/1:17,0:17:38.91:349,39,0	1/1:2,18:20:23.96:386,24,0	./.	0/0:16,0:15:41.73:0,42,599	1/1:18,0:18:14.83:187,15,0	1/1:13,0:13:9.02:110,9,0	1/1:1,23:24:36.12:629,36,0	1/1:20,0:20:44.76:420,45,0	1/1:20,0:20:30.09:372,30,0	1/1:9,0:9:6.02:75,6,0
chr10	88276056	.	GGTGTGT	G	1617.52	PASS	AC=28;AF=0.667;AN=42;BaseQRankSum=3.877;DP=569;FS=5.259;HRun=0;HaplotypeScore=131.4171;InbreedingCoeff=0.5725;MQ=64.35;MQ0=14;MQRankSum=-5.050;QD=5.62;ReadPosRankSum=-1.608;VQSLOD=2.0740;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:46:27.94:0,28,365	0/0:8,0:7:3.01:0,3,38	./.	./.	1/1:12,4:16:9.03:149,9,0	1/1:18,0:18:3.01:41,3,0	1/1:26,0:28:11.77:138,12,0	0/0:17,0:17:2.04:0,2,6	1/1:14,6:20:8.87:181,9,0	0/0:16,0:15:3.90:0,4,47	0/0:11,0:14:18.02:0,18,221	1/1:19,0:24:21.07:290,21,0	1/1:8,2:10:6.02:121,6,0	1/1:9,0:16:15.05:209,15,0	1/1:16,4:20:2.82:60,3,0	1/1:14,7:21:18.06:363,18,0	0/0:23,0:30:27.09:0,27,354	1/1:14,0:15:3.01:42,3,0	./.	1/1:13,4:17:3.01:60,3,0	1/1:41,3:41:3.48:61,3,0	1/1:17,0:21:3.01:42,3,0	./.	1/1:14,2:17:0.74:2,1,0	./.	0/0:15,0:14:1.55:0,2,4	./.	./.
chr10	88276158	.	T	TC	2882.76	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-9.849;DP=580;FS=2.473;HRun=8;HaplotypeScore=76.0229;InbreedingCoeff=0.9954;MQ=85.10;MQ0=0;MQRankSum=0.430;QD=24.22;ReadPosRankSum=0.565;VQSLOD=4.4109;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:93.99:0,94,861	0/0:10,0:10:24.01:0,24,219	0/0:23,0:23:31.01:0,31,368	0/0:30,0:30:62.38:0,62,532	0/0:31,0:31:86.98:0,87,786	1/1:4,21:25:51.15:589,51,0	1/1:3,18:21:20.67:492,21,0	0/0:22,0:22:47.75:0,48,404	0/0:15,0:15:36.02:0,36,329	0/0:20,0:20:51:0,51,459	0/0:10,0:10:26.51:0,27,229	1/1:3,18:21:48.14:552,48,0	0/0:15,0:15:39.01:0,39,352	1/1:2,13:15:38.72:469,39,0	0/0:22,0:22:60.02:0,60,549	0/0:21,0:21:60.03:0,60,549	0/0:25,0:25:54.01:0,54,494	1/1:1,20:21:48.14:554,48,0	0/0:23,0:23:53.99:0,54,490	0/0:20,0:20:45:0,45,412	0/0:24,0:23:19.48:0,19,416	1/1:1,15:16:38.86:415,39,0	0/0:17,0:17:45.02:0,45,412	0/0:28,0:28:71.99:0,72,650	0/0:16,0:16:39:0,39,357	0/0:22,0:22:57.02:0,57,521	0/0:15,0:15:39.01:0,39,357	0/0:7,0:7:18:0,18,165
chr10	88277284	.	C	CTT	10489.42	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=6.393;DP=606;FS=5.698;HRun=10;HaplotypeScore=89.0324;InbreedingCoeff=0.9624;MQ=69.66;MQ0=0;MQRankSum=-2.092;QD=32.08;ReadPosRankSum=-2.170;VQSLOD=4.5660;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:84.12:0,84,854	0/0:7,0:7:15.03:0,15,153	0/0:8,0:9:12.09:0,12,112	0/0:11,0:11:15.60:0,16,100	1/1:2,22:25:62.70:904,63,0	0/0:22,0:22:51.05:0,51,519	0/0:24,0:25:62.86:0,63,622	1/1:10,20:32:65.66:883,66,0	1/1:7,18:26:50.66:719,51,0	0/0:36,0:36:81.06:0,81,824	0/0:21,0:21:60.14:0,60,610	0/0:22,0:22:57.11:0,57,580	1/1:3,16:19:45.15:671,45,0	0/0:22,0:22:45.01:0,45,458	1/1:6,14:20:45.15:665,45,0	1/1:2,16:20:48.16:699,48,0	0/0:26,0:28:74.88:0,75,744	0/0:25,0:25:48:0,48,488	1/1:4,15:20:50.64:691,51,0	1/1:4,17:21:46.81:566,47,0	1/1:2,12:14:36.12:536,36,0	0/0:18,0:18:42.04:0,42,421	1/1:5,17:22:39.13:582,39,0	1/1:0,14:15:44.64:635,45,0	1/1:2,15:18:42.14:610,42,0	1/1:6,14:25:1.61:683,2,0	1/1:5,22:29:66.22:966,66,0	1/1:3,15:21:47.65:680,48,0
chr10	88278512	.	CA	C	6267.33	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=5.145;DP=459;FS=65.505;HRun=1;HaplotypeScore=52.1600;InbreedingCoeff=0.9686;MQ=85.78;MQ0=0;MQRankSum=-0.438;QD=27.98;ReadPosRankSum=0.219;VQSLOD=0.2814;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:69.16:0,69,953	0/0:3,0:3:3:0,3,25	0/0:18,0:18:45.98:0,46,605	0/0:18,0:18:41.98:0,42,611	1/1:5,7:12:30.07:384,30,0	0/0:12,0:12:30.08:0,30,426	0/0:21,0:21:33.08:0,33,462	1/1:1,12:13:33.05:391,33,0	1/1:7,14:21:42.14:583,42,0	0/0:23,0:23:63.20:0,63,919	0/0:14,0:14:36.02:0,36,438	0/0:25,0:25:60.15:0,60,887	1/1:5,3:8:15.02:173,15,0	0/0:14,0:14:42.13:0,42,617	1/1:8,10:18:30.10:418,30,0	1/1:11,6:18:30.05:352,30,0	0/0:21,0:21:45.15:0,45,682	0/0:22,0:22:42.09:0,42,596	1/1:1,14:15:42.14:584,42,0	1/1:3,11:14:30.06:395,30,0	1/1:3,9:12:30.08:385,30,0	0/0:16,0:16:45.11:0,45,617	1/1:7,5:12:24.04:317,24,0	1/1:6,9:15:30.09:402,30,0	1/1:5,12:17:45.14:611,45,0	1/1:2,22:24:12.11:582,12,0	1/1:7,6:13:30.05:363,30,0	1/1:6,6:12:27.05:326,27,0
chr10	88278948	.	AT	A	75.79	PASS	AC=2;AF=0.042;AN=48;BaseQRankSum=2.586;DP=80;FS=2.420;HRun=1;HaplotypeScore=19.6364;InbreedingCoeff=0.1734;MQ=90.92;MQ0=4;MQRankSum=-2.098;QD=10.83;ReadPosRankSum=1.465;VQSLOD=1.7002;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:18.06:0,18,229	./.	0/0:3,0:2:3.01:0,3,38	0/0:16,0:7:18.83:0,19,157	0/0:2,0:2:6.02:0,6,76	0/0:2,0:2:6.02:0,6,74	0/0:2,0:2:6.02:0,6,76	0/0:5,0:5:12.04:0,12,146	0/0:1,0:1:2.74:0,3,12	0/0:3,0:3:9.03:0,9,115	0/0:3,0:3:9.02:0,9,101	0/0:2,0:2:3.01:0,3,38	0/0:3,0:3:5.75:0,6,50	0/0:2,0:2:2.68:0,3,11	0/0:1,0:1:3.01:0,3,38	0/0:2,0:2:2.74:0,3,12	1/1:3,4:6:15.04:161,15,0	0/0:8,0:8:8.68:0,9,73	0/0:3,0:3:8.89:0,9,91	./.	./.	0/0:2,0:2:6.02:0,6,76	0/0:2,0:2:6.02:0,6,76	./.	0/0:1,0:1:3.01:0,3,38	0/0:1,0:1:3.01:0,3,38	0/0:1,0:1:3.01:0,3,38	0/0:1,0:1:3.01:0,3,38
chr10	88278962	.	ATATATATATATATATATATAT	A	522.77	PASS	AB=1.000;AC=13;AF=0.464;AN=28;BaseQRankSum=1.813;DP=54;FS=7.929;HRun=0;HaplotypeScore=34.5589;InbreedingCoeff=0.3163;MQ=68.95;MQ0=7;MQRankSum=-1.350;QD=24.89;ReadPosRankSum=2.122;VQSLOD=0.0025;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:2.89:0,3,65	./.	./.	0/0:17,0:4:9:0,9,186	./.	1/1:2,0:2:6:56,6,0	./.	0/0:1,0:1:3.01:0,3,133	1/1:1,0:1:3.01:73,3,0	0/0:2,0:2:3.01:0,3,223	./.	./.	1/1:2,0:2:3.01:73,3,0	1/1:1,1:2:3.01:173,3,0	./.	1/1:2,0:2:3.01:73,3,0	0/1:4,0:3:10.25:10,0,25	1/1:0,8:8:3.01:173,3,0	0/0:2,0:2:6.02:0,6,104	./.	./.	./.	./.	./.	0/0:1,0:1:3.01:0,3,54	./.	./.	0/0:2,0:1:3.01:0,3,90
chr10	88278966	.	ATATATATATATATATAT	A	608.15	PASS	AB=1.000;AC=13;AF=0.500;AN=26;BaseQRankSum=0.906;DP=56;FS=0.000;HRun=0;HaplotypeScore=29.6592;InbreedingCoeff=0.2537;MQ=58.74;MQ0=8;MQRankSum=-2.355;QD=26.44;ReadPosRankSum=2.626;VQSLOD=0.8533;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:2.88:0,3,40	./.	./.	0/0:15,0:3:6.49:0,6,124	./.	1/1:2,0:2:0.89:2,1,0	./.	0/0:1,0:1:3.01:0,3,77	1/1:0,1:1:3.01:145,3,0	0/0:2,0:2:3.01:0,3,175	./.	./.	1/1:0,2:2:3.01:145,3,0	1/1:2,0:2:3.01:124,3,0	./.	1/1:0,2:2:3.01:145,3,0	0/1:6,0:5:20.99:21,0,50	1/1:8,0:8:3.01:124,3,0	0/0:2,0:2:2.37:0,2,8	./.	./.	./.	./.	./.	./.	./.	./.	0/0:2,0:1:3:0,3,25
chr10	88280907	.	T	TAGACACAC	12850.33	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=7.041;DP=760;FS=4.783;HRun=0;HaplotypeScore=255.7411;InbreedingCoeff=0.9234;MQ=56.72;MQ0=22;MQRankSum=-11.171;QD=24.20;ReadPosRankSum=0.752;VQSLOD=4.2411;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:72.25:0,72,1760	0/0:9,0:9:27.09:0,27,662	0/0:54,0:36:61.92:0,62,1069	0/0:59,0:33:71.77:0,72,1464	1/1:24,0:24:19.88:375,20,0	1/1:21,0:20:38.06:555,38,0	1/1:25,0:25:30.06:664,30,0	1/1:42,0:39:63.21:1682,63,0	1/1:23,0:23:34.53:516,35,0	0/0:24,0:24:57.19:0,57,1381	0/0:14,0:14:15.05:0,15,297	1/1:20,0:19:27.81:602,28,0	1/1:24,0:24:29.39:540,29,0	1/1:26,0:26:41.99:652,42,0	1/1:29,1:30:50.65:959,51,0	1/1:32,0:31:59.30:971,59,0	0/0:34,0:34:66.20:0,66,1522	1/1:11,0:11:13.98:372,14,0	1/1:24,0:24:43.35:824,43,0	1/1:20,0:17:29.04:466,29,0	1/1:27,3:28:17.80:432,18,0	1/1:32,0:32:44.11:786,44,0	1/1:19,0:18:26.96:292,27,0	1/1:29,1:28:22.89:439,23,0	1/1:26,0:26:41.54:591,42,0	1/1:24,0:22:22.16:482,22,0	1/1:21,0:20:41.90:499,42,0	0/1:27,0:25:4.02:155,0,4
chr10	88280924	.	AC	A	9770.49	PASS	AB=0.770;AC=40;AF=0.714;AN=56;BaseQRankSum=14.904;DP=744;FS=1.546;HRun=1;HaplotypeScore=197.6389;InbreedingCoeff=0.8100;MQ=43.38;MQ0=25;MQRankSum=-11.123;QD=18.54;ReadPosRankSum=2.151;VQSLOD=5.0417;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.29:0,87,1338	0/0:11,0:11:33.11:0,33,498	0/0:41,0:22:63.15:0,63,953	0/0:53,0:26:71.44:0,71,1063	1/1:7,18:25:25.30:260,25,0	1/1:17,4:20:40.89:450,41,0	1/1:13,11:24:13.44:346,13,0	1/1:7,21:25:12.20:565,12,0	1/1:5,19:24:49.88:544,50,0	0/0:26,0:26:78.25:0,78,1145	0/0:13,0:13:27.20:0,27,324	1/1:20,8:27:38.95:452,39,0	1/1:3,18:21:26.24:527,26,0	1/1:23,4:27:38.69:460,39,0	1/1:8,27:35:58.98:682,59,0	1/1:6,29:34:74.04:886,74,0	0/0:40,0:40:98.57:0,99,1476	0/1:7,3:9:24.79:197,0,25	0/1:19,8:26:99:305,0,368	1/1:7,17:21:30.09:363,30,0	1/1:10,14:22:18.26:194,18,0	1/1:18,10:28:45.09:530,45,0	1/1:6,15:19:30.09:369,30,0	1/1:6,24:28:23.80:287,24,0	1/1:5,19:23:48.14:572,48,0	1/1:3,19:20:11.93:530,12,0	1/1:6,19:24:61.99:715,62,0	1/1:2,22:22:54.07:537,54,0
chr10	88280925	.	CA	C	9933.25	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=14.914;DP=751;FS=2.489;HRun=2;HaplotypeScore=198.3628;InbreedingCoeff=0.8023;MQ=43.32;MQ0=27;MQRankSum=-11.809;QD=18.71;ReadPosRankSum=2.159;VQSLOD=4.8611;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:86.64:0,87,1178	0/0:11,0:11:32.43:0,32,408	0/0:42,0:22:63.16:0,63,802	0/0:52,1:25:65.42:0,65,833	1/1:25,1:26:25.50:275,26,0	1/1:21,0:20:40.91:458,41,0	1/1:23,1:24:4.85:355,5,0	1/1:28,0:25:19.71:572,20,0	1/1:23,1:24:52.93:587,53,0	0/0:27,0:27:77.48:0,77,928	0/0:13,0:13:22.63:0,23,235	1/1:30,0:29:40.75:456,41,0	1/1:21,1:22:27.44:543,27,0	1/1:27,0:27:38.59:460,39,0	1/1:35,0:35:58.26:681,58,0	1/1:35,0:34:74.04:887,74,0	0/0:39,2:40:95.96:0,96,1272	0/1:10,0:9:16.15:216,0,16	0/1:27,0:25:99:305,0,309	1/1:24,0:21:30.09:363,30,0	1/1:23,0:21:18.22:194,18,0	1/1:28,0:28:45.12:535,45,0	1/1:21,0:19:30.09:369,30,0	1/1:30,0:28:23.80:287,24,0	1/1:25,0:24:49.95:576,50,0	1/1:21,1:20:17.79:554,18,0	1/1:25,0:24:62:722,62,0	1/1:24,0:22:54.07:538,54,0
chr10	88280926	.	A	AC	8801.13	PASS	AB=0.839;AC=40;AF=0.714;AN=56;BaseQRankSum=15.130;DP=760;FS=2.479;HRun=1;HaplotypeScore=208.4583;InbreedingCoeff=0.8208;MQ=42.99;MQ0=27;MQRankSum=-11.762;QD=16.27;ReadPosRankSum=1.876;VQSLOD=5.0929;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:33:87.72:0,88,1144	0/0:9,0:11:33.04:0,33,408	0/0:41,0:21:63.16:0,63,802	0/0:52,0:24:65.42:0,65,833	1/1:20,1:26:25.51:261,26,0	1/1:6,13:19:40.91:479,41,0	1/1:15,7:25:18.02:366,18,0	1/1:29,0:26:25.71:625,26,0	1/1:23,0:25:54.54:480,55,0	0/0:22,0:27:79.03:0,79,950	0/0:13,0:14:22.95:0,23,258	1/1:11,9:29:40.82:457,41,0	1/1:22,0:22:25.73:433,26,0	1/1:6,13:27:38.47:484,38,0	1/1:33,0:35:58.07:589,58,0	1/1:32,1:35:73.47:721,73,0	0/0:36,0:40:98.86:0,99,1261	0/1:6,3:9:14.17:249,0,14	0/1:23,1:25:99:256,0,309	1/1:18,0:21:29.99:294,30,0	1/1:21,2:23:13.05:180,13,0	1/1:12,15:28:45.11:542,45,0	1/1:17,0:19:29.91:246,30,0	1/1:29,3:30:23.89:274,24,0	1/1:23,0:25:51.62:484,52,0	1/1:23,0:21:23.06:488,23,0	1/1:20,0:24:61.70:540,62,0	1/1:25,0:23:54.64:352,55,0
chr10	88280934	.	C	CA	4373.09	PASS	AB=0.981;AC=32;AF=0.571;AN=56;BaseQRankSum=13.560;DP=733;FS=0.770;HRun=1;HaplotypeScore=210.1324;InbreedingCoeff=0.2843;MQ=40.40;MQ0=31;MQRankSum=-12.291;QD=8.20;ReadPosRankSum=1.528;VQSLOD=2.2592;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:84.37:0,84,1059	0/0:12,0:12:32.92:0,33,385	0/0:34,0:15:39.03:0,39,428	0/0:47,0:19:47.33:0,47,549	1/1:24,0:24:15.01:80,15,0	1/1:16,1:17:33.75:454,34,0	0/1:20,6:26:40.12:302,0,40	0/1:30,0:26:85.46:456,0,85	1/1:26,0:26:15.09:174,15,0	0/0:26,0:26:75.79:0,76,869	0/0:14,0:14:32.76:0,33,337	1/1:29,0:29:46.78:446,47,0	0/1:21,0:20:20.05:122,0,20	1/1:24,0:25:29.46:391,29,0	0/1:34,0:34:11.46:124,0,11	1/1:33,0:33:41.55:256,42,0	0/0:34,0:33:83.85:0,84,1019	0/1:10,0:9:59.49:183,0,59	0/1:21,0:18:99:120,0,174	1/1:21,0:18:11.42:50,11,0	1/1:26,0:24:10.25:76,10,0	1/1:26,2:28:48.67:491,49,0	1/1:19,0:18:23.98:102,24,0	0/1:34,0:31:25.73:39,0,26	0/1:27,0:26:3.59:79,0,4	0/1:25,0:23:99:128,0,161	1/1:30,0:26:51.10:284,51,0	0/1:27,0:25:14.39:14,0,34
chr10	88280935	.	AC	A	6475.10	PASS	AB=0.738;AC=32;AF=0.571;AN=56;BaseQRankSum=12.251;DP=725;FS=0.000;HRun=1;HaplotypeScore=196.9994;InbreedingCoeff=0.2311;MQ=40.74;MQ0=29;MQRankSum=-10.024;QD=12.31;ReadPosRankSum=2.333;VQSLOD=3.7043;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:88.87:0,89,1255	0/0:12,0:12:30.98:0,31,423	0/0:31,0:13:39.03:0,39,428	0/0:45,0:17:47.33:0,47,549	1/1:5,17:24:31.77:237,32,0	0/1:14,3:17:57.77:58,0,82	0/1:16,10:26:99:104,0,197	0/1:16,14:26:88.69:425,0,89	1/1:6,16:26:24.24:604,24,0	0/0:27,0:27:72.72:0,73,931	0/0:14,0:14:29.72:0,30,329	0/1:22,7:30:28.28:184,0,28	1/1:3,17:19:0.81:410,1,0	0/1:23,3:26:46.38:63,0,46	1/1:4,26:31:13.90:499,14,0	1/1:0,32:32:65.27:748,65,0	0/0:35,0:34:83.58:0,84,1181	0/1:7,3:9:65.58:66,0,70	0/1:13,8:19:99:325,0,164	1/1:6,15:18:23.52:270,24,0	1/1:15,4:22:12.38:70,12,0	0/1:20,8:28:58.65:59,0,150	1/1:6,14:19:38.95:454,39,0	0/1:7,27:31:27.53:139,0,28	1/1:5,21:25:39.85:479,40,0	0/1:8,5:22:99:268,0,106	1/1:1,27:26:66.02:823,66,0	1/1:7,1:25:12.76:190,13,0
chr10	88280936	.	C	CA	4632.40	PASS	AB=0.998;AC=30;AF=0.536;AN=56;BaseQRankSum=12.535;DP=727;FS=0.737;HRun=1;HaplotypeScore=204.7030;InbreedingCoeff=0.1521;MQ=40.98;MQ0=29;MQRankSum=-11.296;QD=8.76;ReadPosRankSum=2.110;VQSLOD=2.4471;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:87.33:0,87,1067	0/0:12,0:12:32.94:0,33,399	0/0:30,0:13:33.08:0,33,387	0/0:42,0:14:30.56:0,31,370	1/1:24,0:24:29.77:189,30,0	0/1:18,0:18:72.33:95,0,72	0/1:26,0:26:58.76:59,0,178	0/1:29,0:27:99:245,0,104	1/1:21,5:26:37.76:505,38,0	0/0:28,0:28:75.79:0,76,875	0/0:14,0:14:32.77:0,33,339	0/1:30,0:30:26.11:149,0,26	0/1:20,0:19:1.02:272,0,1	0/1:26,0:26:36.61:73,0,37	1/1:31,0:31:20.43:416,20,0	1/1:32,0:32:63.25:542,63,0	0/0:35,0:34:86.83:0,87,1040	0/1:10,0:9:40.31:40,0,82	0/1:21,0:19:99:242,0,178	1/1:21,0:18:23.92:207,24,0	1/1:24,0:23:3.79:19,4,0	0/1:28,0:28:57.16:57,0,138	1/1:20,0:19:38.16:328,38,0	0/1:33,1:31:19.09:105,0,19	1/1:22,4:25:45.63:385,46,0	0/1:23,0:22:86.73:87,0,136	1/1:30,1:28:63.84:606,64,0	0/1:28,0:25:13.13:13,0,29
chr10	88280940	.	C	CA	1089.13	PASS	AB=0.782;AC=6;AF=0.107;AN=56;BaseQRankSum=2.805;DP=731;FS=2.718;HRun=1;HaplotypeScore=217.3678;InbreedingCoeff=0.6881;MQ=40.08;MQ0=25;MQRankSum=-4.469;QD=10.57;ReadPosRankSum=2.481;VQSLOD=2.1349;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:90.38:0,90,1134	0/0:13,0:13:32.90:0,33,369	0/0:26,0:12:27.06:0,27,324	0/0:34,0:9:21.07:0,21,267	0/0:24,0:24:40.80:0,41,437	0/0:18,0:18:51.03:0,51,606	0/0:28,0:28:45.34:0,45,581	0/1:20,9:27:99:170,0,135	0/0:27,0:27:43.10:0,43,550	0/0:32,0:32:90.83:0,91,1052	0/0:15,0:15:35.78:0,36,376	0/0:28,0:29:41.32:0,41,475	0/0:20,0:19:41.62:0,42,476	0/0:27,0:27:39.05:0,39,485	0/0:31,0:31:65.86:0,66,768	0/0:35,0:35:77.04:0,77,879	0/0:35,0:34:83.87:0,84,1019	0/0:12,0:11:26.18:0,26,246	0/0:22,0:19:38.49:0,38,438	0/0:24,0:21:39.10:0,39,462	1/1:14,10:23:14.43:116,14,0	0/0:29,0:29:62.97:0,63,763	0/0:21,0:20:35.91:0,36,423	0/0:33,0:31:23.47:0,23,295	0/0:27,0:26:45.41:0,45,555	0/1:18,6:23:3.46:506,0,3	0/0:31,0:28:58.15:0,58,656	1/1:21,5:25:46.79:433,47,0
chr10	88281277	.	GCTCTCTCTCTCTCTCTCTCTCTCT	G	3062.42	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=5.699;DP=537;FS=10.460;HRun=0;HaplotypeScore=300.2755;InbreedingCoeff=0.7780;MQ=64.62;MQ0=15;MQRankSum=-4.870;QD=27.59;ReadPosRankSum=0.374;VQSLOD=0.8842;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:19:21.07:0,21,882	0/0:7,0:13:15.05:0,15,626	0/1:30,0:23:2.72:3,0,559	0/0:28,0:13:9.03:0,9,133	0/0:18,0:17:27.09:0,27,2017	1/1:6,10:16:9.03:567,9,0	1/1:6,4:8:3.01:189,3,0	0/0:51,0:51:75.05:0,75,2844	0/0:18,0:17:30.09:0,30,2021	0/0:14,0:14:31.65:0,32,1252	0/0:9,0:14:30.09:0,30,1200	1/1:3,6:8:9.03:567,9,0	0/0:15,0:14:18.06:0,18,780	1/1:6,13:19:18.06:1086,18,0	0/0:18,0:17:24.08:0,24,1237	0/0:20,0:20:42.14:0,42,3125	0/0:12,0:19:15.04:0,15,621	1/1:6,4:7:3.01:189,3,0	0/0:19,0:18:30.06:0,30,1495	0/0:17,0:16:24.07:0,24,1222	0/0:21,0:21:24.08:0,24,1532	1/1:4,12:17:12.04:623,12,0	0/0:18,0:17:12.04:0,12,928	0/0:13,0:13:17.85:0,18,1405	0/0:23,0:20:18.05:0,18,997	0/0:23,0:23:54.14:0,54,2898	0/0:22,0:25:54.17:0,54,3097	0/0:17,0:16:6.02:0,6,431
chr10	88281321	.	TC	T	3187.96	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=4.084;DP=612;FS=41.217;HRun=4;HaplotypeScore=99.8614;InbreedingCoeff=0.9180;MQ=46.34;MQ0=81;MQRankSum=-1.660;QD=9.52;ReadPosRankSum=0.089;VQSLOD=-0.6694;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:31:48.33:0,48,532	0/0:12,0:12:20.55:0,21,238	0/0:29,0:9:0.64:0,1,174	0/0:38,0:11:18.38:0,18,256	1/1:14,10:16:20.83:201,21,0	0/0:21,0:21:33.11:0,33,328	0/0:15,0:15:26.03:0,26,274	1/1:11,21:24:54.15:624,54,0	1/1:8,12:15:22.90:215,23,0	0/0:20,0:20:56.67:0,57,700	0/0:19,0:18:31.44:0,31,336	0/0:12,0:12:21.16:0,21,207	1/1:9,5:7:8.82:84,9,0	0/0:16,0:16:19.17:0,19,128	1/1:8,10:11:8.89:86,9,0	1/1:15,10:15:17.62:180,18,0	0/0:18,0:18:35.05:0,35,384	0/0:23,0:22:30.16:0,30,512	1/1:6,10:14:40.53:374,41,0	1/1:13,12:12:20.92:218,21,0	1/1:10,6:9:13.87:105,14,0	0/0:23,0:23:27.13:0,27,258	1/1:10,10:12:11.54:124,12,0	1/1:12,7:13:5.25:145,5,0	1/1:14,9:11:17.45:147,17,0	1/1:16,14:17:35.90:366,36,0	1/1:12,11:17:35.04:329,35,0	1/1:12,13:11:20.89:214,21,0
chr10	88281322	.	C	CT	4467.76	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=3.041;DP=615;FS=38.209;HRun=1;HaplotypeScore=99.8349;InbreedingCoeff=0.9355;MQ=46.49;MQ0=81;MQRankSum=0.199;QD=13.34;ReadPosRankSum=-0.934;VQSLOD=1.8170;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:34.63:0,35,564	0/0:12,0:12:21.05:0,21,253	0/0:29,0:9:0.45:0,0,179	0/0:38,0:11:25.46:0,25,270	1/1:16,11:17:21.05:261,21,0	0/0:21,0:21:35.16:0,35,359	0/0:15,0:15:26.95:0,27,291	1/1:27,5:24:55.87:628,56,0	1/1:13,7:15:22.31:289,22,0	0/0:21,0:21:59.90:0,60,729	0/0:19,0:18:32.92:0,33,380	0/0:13,0:13:23.95:0,24,255	1/1:6,7:6:9.03:106,9,0	0/0:16,0:16:23.81:0,24,197	1/1:14,5:12:9.03:118,9,0	1/1:14,11:15:18.03:342,18,0	0/0:18,0:18:36.02:0,36,411	0/0:24,0:23:33.99:0,34,532	1/1:12,4:14:42.09:513,42,0	1/1:16,9:12:21.05:251,21,0	1/1:10,6:9:14.74:204,15,0	0/0:23,0:23:29.92:0,30,301	1/1:12,8:11:10.96:112,11,0	1/1:13,7:13:19.91:217,20,0	1/1:11,10:9:17.74:235,18,0	1/1:23,9:18:44.28:491,44,0	1/1:14,10:18:37.67:465,38,0	1/1:17,8:11:21.31:236,21,0
chr10	88281399	.	TA	T	9231.47	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=16.187;DP=574;FS=2.700;HRun=4;HaplotypeScore=89.1148;InbreedingCoeff=0.9991;MQ=75.48;MQ0=6;MQRankSum=-1.525;QD=29.21;ReadPosRankSum=1.759;VQSLOD=4.9122;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.16:0,75,1015	0/0:11,0:11:33.11:0,33,461	0/0:17,0:17:38.94:0,39,485	0/0:16,0:15:32.51:0,33,504	1/1:1,16:16:48.14:560,48,0	0/0:16,0:15:45.15:0,45,629	0/0:13,0:13:36.11:0,36,474	1/1:4,23:27:69.06:746,69,0	1/1:1,22:23:69.13:771,69,0	0/0:18,0:18:54.18:0,54,743	0/0:14,0:14:42.14:0,42,588	0/0:13,0:13:30.09:0,30,402	1/1:2,16:17:48.11:545,48,0	0/0:13,0:13:36.12:0,36,503	1/1:2,25:27:78.19:890,78,0	1/1:5,17:19:57.11:638,57,0	0/0:36,0:36:99:0,102,1339	0/0:40,0:40:99:0,111,1514	1/1:3,14:16:45.09:510,45,0	1/1:5,24:27:75.05:826,75,0	1/1:1,11:11:27.04:300,27,0	0/0:25,0:25:72.23:0,72,992	1/1:1,17:17:45.03:494,45,0	1/1:2,15:16:39.12:453,39,0	1/1:5,21:22:63.11:705,63,0	1/1:6,19:22:21.13:633,21,0	1/1:1,22:23:62.99:672,63,0	1/1:1,14:14:42.12:490,42,0
chr10	88281475	.	G	GGT	405.05	PASS	AB=0.886;AC=9;AF=0.214;AN=42;BaseQRankSum=-3.375;DP=532;FS=2.568;HRun=0;HaplotypeScore=135.5982;InbreedingCoeff=0.2170;MQ=57.25;MQ0=14;MQRankSum=2.705;QD=3.40;ReadPosRankSum=-1.968;VQSLOD=2.5845;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:18.01:0,18,179	./.	./.	./.	0/0:18,0:18:2.84:0,3,14	0/1:19,0:17:51.82:56,0,52	0/1:30,3:33:31.91:36,0,32	./.	0/0:19,0:19:2.84:0,3,14	0/0:18,0:18:2.97:0,3,32	0/0:10,0:10:3.01:0,3,32	1/1:10,1:11:8.95:86,9,0	0/0:16,0:16:10.21:0,10,47	1/1:7,0:7:2.96:19,3,0	0/0:20,0:19:8.52:0,9,42	0/0:21,0:21:5.68:0,6,28	0/0:32,0:39:28.11:0,28,230	0/1:24,11:35:7.51:285,0,8	./.	0/0:16,0:16:2.84:0,3,14	./.	1/1:11,0:11:3.01:41,3,0	0/0:11,0:10:8.48:0,8,41	./.	0/0:22,0:22:0.47:0,0,1	0/0:25,0:25:5.68:0,6,28	0/0:14,0:13:11.36:0,11,56	0/0:7,0:6:2.84:0,3,14
chr10	88281498	.	GTGTGTGTGTGTGTGTGTGTGTGTGTCTGTA	G	6219.98	PASS	AB=0.797;AC=25;AF=0.446;AN=56;BaseQRankSum=7.253;DP=471;FS=3.572;HRun=0;HaplotypeScore=230.2971;InbreedingCoeff=0.6127;MQ=48.38;MQ0=20;MQRankSum=-4.850;QD=29.48;ReadPosRankSum=0.394;VQSLOD=3.8042;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:68.79:0,69,7622	0/0:3,0:3:6.02:0,6,470	0/0:20,0:4:9:0,9,449	0/0:28,0:9:24.07:0,24,843	1/1:4,9:13:5.88:255,6,0	0/0:17,0:15:24.08:0,24,2232	0/0:25,0:26:47.18:0,47,2936	0/1:16,0:15:24.19:231,0,24	1/1:1,18:19:6.02:279,6,0	0/0:15,0:13:39.13:0,39,3342	0/0:11,0:11:27.09:0,27,2934	0/0:14,0:13:29.11:0,29,2542	1/1:0,20:20:11.18:961,11,0	0/0:5,0:5:12.04:0,12,902	1/1:1,23:23:9.50:723,10,0	1/1:2,17:19:7.38:463,7,0	0/0:40,0:39:99:0,104,9024	0/0:35,0:32:71.01:0,71,5661	1/1:7,0:5:14.17:128,14,0	1/1:1,12:13:3.01:241,3,0	0/0:8,0:8:5.58:0,6,27	0/0:5,0:5:9.03:0,9,878	1/1:2,12:13:9.50:723,10,0	0/1:15,3:18:52.43:52,0,62	1/1:17,0:17:3.01:174,3,0	0/1:2,14:16:99:695,0,297	1/1:7,3:10:17.98:984,18,0	1/1:4,1:4:11.96:309,12,0
chr10	88281500	.	GTGTGTGTGTGTGTGTGTGTGTGTCTGTA	G	5244.39	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=8.848;DP=465;FS=3.133;HRun=0;HaplotypeScore=221.3615;InbreedingCoeff=0.4096;MQ=48.13;MQ0=18;MQRankSum=-3.420;QD=25.21;ReadPosRankSum=1.248;VQSLOD=3.5196;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:69.34:0,69,7081	0/0:3,0:3:6.02:0,6,434	0/0:20,0:4:12.01:0,12,500	0/0:26,0:8:18.05:0,18,657	1/1:13,0:13:3.48:206,3,0	0/0:17,0:15:24.08:0,24,2066	0/0:26,0:26:54.68:0,55,2631	0/1:16,0:15:66.56:253,0,67	1/1:19,0:19:6.01:230,6,0	0/0:16,0:14:42.11:0,42,3101	0/0:11,0:11:27.09:0,27,2718	0/0:14,0:13:29.10:0,29,2338	1/1:20,0:20:11.44:822,11,0	0/0:5,0:5:12.04:0,12,818	1/1:24,0:23:9.50:618,10,0	1/1:19,0:19:7.38:414,7,0	0/0:40,0:39:97.51:0,98,8185	0/0:34,0:31:70.79:0,71,5159	0/1:8,0:7:37.11:84,0,37	1/1:12,0:12:3.01:206,3,0	0/0:7,0:7:2.98:0,3,23	0/0:5,0:5:9.03:0,9,809	1/1:14,0:13:9.50:618,10,0	0/1:17,0:17:3.07:3,0,46	1/1:2,16:18:3.01:221,3,0	0/1:16,0:16:99:563,0,304	0/1:9,0:9:7.62:805,0,8	0/1:3,0:2:7.96:200,0,8
chr10	88281522	.	GTCTGTA	G	2654.25	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=9.903;DP=480;FS=1.811;HRun=0;HaplotypeScore=118.4573;InbreedingCoeff=0.7580;MQ=65.07;MQ0=13;MQRankSum=-4.407;QD=13.01;ReadPosRankSum=1.057;VQSLOD=2.9209;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:90.22:0,90,2111	0/0:3,0:3:4:0,4,92	0/0:33,0:16:48.16:0,48,866	0/0:33,0:17:18.12:0,18,734	1/1:9,0:9:3.01:52,3,0	0/0:13,0:13:15.04:0,15,462	0/0:24,0:24:51.17:0,51,910	1/1:0,16:16:48.15:691,48,0	1/1:18,0:18:3.01:52,3,0	0/0:15,0:13:36.11:0,36,836	0/0:12,0:12:36.12:0,36,840	0/0:15,0:14:33.58:0,34,652	1/1:20,0:20:11.77:208,12,0	0/0:10,0:10:24.08:0,24,446	1/1:24,0:23:9.03:157,9,0	1/1:18,0:18:6.02:105,6,0	0/0:36,0:35:89.26:0,89,1857	0/0:34,0:33:69:0,69,1433	1/1:0,7:7:21.02:260,21,0	1/1:12,0:12:3.01:52,3,0	1/1:12,0:12:11.69:188,12,0	0/0:10,0:10:24.08:0,24,490	1/1:12,0:12:9.03:157,9,0	1/1:14,0:14:14.99:223,15,0	1/1:16,0:16:3.01:47,3,0	0/1:15,0:15:57.50:241,0,57	1/1:7,0:7:18.06:291,18,0	1/1:4,0:3:9.03:137,9,0
chr10	88282171	.	AC	A	5208.20	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=17.585;DP=600;FS=10.800;HRun=1;HaplotypeScore=139.2435;InbreedingCoeff=0.9898;MQ=88.92;MQ0=0;MQRankSum=-13.905;QD=30.46;ReadPosRankSum=0.663;VQSLOD=3.2587;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,132,2101	0/0:9,0:9:27.06:0,27,403	0/0:27,0:27:70.76:0,71,1077	0/0:23,0:23:52.87:0,53,756	0/0:18,0:18:48.16:0,48,763	1/1:0,16:16:45.14:533,45,0	1/1:0,17:17:42.13:512,42,0	1/1:0,12:12:33.03:422,33,0	0/0:27,0:27:81.23:0,81,1260	0/0:12,0:12:36.12:0,36,575	0/0:15,0:15:45.15:0,45,718	1/1:0,29:29:75.23:895,75,0	0/0:21,0:21:63.20:0,63,981	1/1:0,30:30:72.22:881,72,0	0/0:26,0:26:78.27:0,78,1245	0/0:28,0:28:84.26:0,84,1315	0/0:44,0:44:99:0,132,2074	1/1:0,11:11:30.09:380,30,0	0/0:20,0:20:60.19:0,60,913	0/0:19,0:19:54.18:0,54,861	1/1:0,15:15:27.09:361,27,0	1/1:1,14:15:36.11:452,36,0	0/0:22,0:22:60.16:0,60,906	0/0:25,0:25:75.26:0,75,1197	0/0:16,0:16:48.12:0,48,716	1/1:1,22:23:18.48:667,18,0	0/0:29,0:29:87.30:0,87,1376	1/1:0,3:3:9.03:106,9,0
chr10	88282175	.	GCAACCTAGC	G	8071.07	PASS	AB=0.528;AC=19;AF=0.339;AN=56;BaseQRankSum=15.626;DP=591;FS=4.953;HRun=0;HaplotypeScore=221.3086;InbreedingCoeff=0.8685;MQ=86.87;MQ0=0;MQRankSum=-15.670;QD=50.76;ReadPosRankSum=2.716;VQSLOD=4.3964;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,113,5307	0/0:9,0:9:24.08:0,24,1041	0/0:23,0:23:54.17:0,54,2012	0/0:23,0:23:52.32:0,52,1834	0/0:21,0:21:60.21:0,60,2822	1/1:15,0:15:42.14:1135,42,0	1/1:15,0:15:33.11:843,33,0	1/1:9,1:10:1.25:79,1,0	0/0:29,0:29:84.29:0,84,3895	0/0:15,0:15:45.15:0,45,1959	0/0:16,0:16:48.16:0,48,2224	1/1:28,0:28:66.23:1717,66,0	0/0:21,0:21:54.19:0,54,2441	1/1:28,0:28:57.15:1429,57,0	0/0:27,0:27:75.26:0,75,3213	0/0:27,0:27:60.21:0,60,2728	0/0:42,0:42:99:0,114,5080	1/1:11,0:11:24.04:597,24,0	0/0:19,0:19:48.16:0,48,2025	0/0:20,0:20:57.18:0,57,2290	1/1:9,6:15:11.97:218,12,0	1/1:14,0:15:18.06:480,18,0	0/0:22,0:22:57.20:0,57,2590	0/0:26,0:26:72.25:0,72,3257	0/0:15,0:15:42.14:0,42,1895	0/1:2,17:19:82.69:1330,0,83	0/0:29,0:29:81.28:0,81,3785	1/1:0,3:3:9.03:244,9,0
chr10	88282183	.	GCCAACC	G	3782.53	PASS	AB=0.920;AC=15;AF=0.268;AN=56;BaseQRankSum=15.750;DP=570;FS=2.382;HRun=0;HaplotypeScore=187.6922;InbreedingCoeff=0.4959;MQ=86.48;MQ0=0;MQRankSum=-15.072;QD=29.10;ReadPosRankSum=3.884;VQSLOD=3.4986;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,4849	0/0:8,0:8:24.08:0,24,860	0/0:22,0:22:66.23:0,66,2092	0/0:23,0:23:58.19:0,58,1840	0/0:26,0:26:78.27:0,78,2894	1/1:0,14:14:42.14:611,42,0	1/1:1,11:12:30.10:430,30,0	0/1:7,0:7:19.85:20,0,46	0/0:28,0:28:84.29:0,84,3132	0/0:18,0:18:54.19:0,54,1920	0/0:21,0:21:63.22:0,63,2287	1/1:1,22:23:64.09:880,64,0	0/0:21,0:21:60.19:0,60,2067	1/1:1,20:22:3.92:697,4,0	0/0:26,0:26:78.27:0,78,2798	0/0:23,0:23:69.21:0,69,2338	0/0:40,0:40:99:0,120,4377	1/1:0,8:8:7.25:311,7,0	0/0:22,0:22:66.22:0,66,2262	0/0:22,0:22:66.21:0,66,2281	0/1:11,0:11:44.60:45,0,98	0/1:3,6:9:19.88:230,0,20	0/0:20,0:20:60.21:0,60,2209	0/0:25,0:25:75.26:0,75,2795	0/0:19,0:19:57.20:0,57,2001	0/1:19,0:19:80.50:479,0,81	0/0:30,0:30:90.29:0,90,3248	0/1:5,0:5:32.21:79,0,32
chr10	88282190	.	TAGC	T	1207.36	PASS	AB=0.651;AC=7;AF=0.125;AN=56;BaseQRankSum=15.712;DP=597;FS=0.848;HRun=0;HaplotypeScore=167.9226;InbreedingCoeff=-0.1509;MQ=84.41;MQ0=0;MQRankSum=-14.560;QD=8.75;ReadPosRankSum=4.387;VQSLOD=2.8894;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,3244	0/0:7,0:7:21.07:0,21,517	0/0:26,0:26:78.13:0,78,1480	0/0:19,0:19:49.12:0,49,1004	0/0:27,0:27:81.28:0,81,1984	0/1:5,14:19:99:257,0,193	0/1:8,11:19:99:161,0,336	0/0:11,0:11:23.96:0,24,630	0/0:27,0:27:81.26:0,81,1909	0/0:18,0:18:54.19:0,54,1331	0/0:21,0:21:63.22:0,63,1525	0/1:3,22:25:53.68:359,0,54	0/0:20,0:20:60.21:0,60,1466	0/1:5,20:25:99:297,0,244	0/0:24,0:24:72.23:0,72,1705	0/0:22,0:22:66.23:0,66,1582	0/0:36,0:36:99:0,108,2634	0/1:6,8:14:99:142,0,230	0/0:20,0:20:57.18:0,57,1300	0/0:21,0:21:57.18:0,57,1290	0/0:14,0:14:18.69:0,19,524	0/1:4,6:10:97.06:97,0,122	0/0:19,0:19:57.20:0,57,1402	0/0:23,0:23:69.20:0,69,1587	0/0:19,0:19:57.20:0,57,1404	0/1:26,0:26:25.41:25,0,559	0/0:31,0:31:93.32:0,93,2287	0/0:7,0:7:3.25:0,3,258
chr10	88282679	.	A	AAT	2600.23	PASS	AB=0.608;AC=16;AF=0.296;AN=54;BaseQRankSum=-10.060;DP=365;FS=3.278;HRun=0;HaplotypeScore=59.6339;InbreedingCoeff=0.5856;MQ=67.48;MQ0=1;MQRankSum=2.904;QD=22.81;ReadPosRankSum=2.482;VQSLOD=4.0100;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:65.99:0,66,753	0/0:6,0:6:12:0,12,121	0/0:4,0:3:3.01:0,3,37	./.	1/1:4,11:16:33.04:485,33,0	0/0:16,0:16:36.03:0,36,411	0/0:10,0:10:27.05:0,27,300	0/0:25,0:25:51.13:0,51,599	1/1:4,6:10:21.07:328,21,0	0/0:13,0:13:36.09:0,36,417	0/0:18,0:18:30.08:0,30,361	0/0:11,0:11:30.01:0,30,337	0/1:3,7:10:25.19:105,0,25	0/0:8,0:8:20.94:0,21,196	1/1:1,1:5:6.01:76,6,0	0/1:7,8:15:13.11:320,0,13	0/0:9,0:9:27.07:0,27,321	0/0:17,0:17:33.10:0,33,407	0/1:4,10:15:0.95:457,0,1	0/1:6,10:16:10.15:321,0,10	0/0:5,0:5:15.02:0,15,171	0/0:4,0:4:2.97:0,3,20	1/1:2,6:8:12.04:197,12,0	1/1:1,1:2:3.01:49,3,0	0/0:18,0:18:45.12:0,45,535	0/0:25,0:25:63.06:0,63,720	1/1:3,14:16:27.09:441,27,0	0/0:29,0:29:60.11:0,60,707
chr10	88282761	.	C	CAT	9106.44	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.068;DP=451;FS=22.094;HRun=0;HaplotypeScore=68.4796;InbreedingCoeff=0.9958;MQ=80.54;MQ0=0;MQRankSum=-5.465;QD=50.59;ReadPosRankSum=-1.684;VQSLOD=3.3870;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.09:0,72,1006	0/0:5,0:5:15.02:0,15,217	0/0:18,0:18:48.04:0,48,723	0/0:12,0:12:33.11:0,33,504	0/0:13,0:13:33.11:0,33,532	1/1:0,17:17:48.16:973,48,0	1/1:0,14:15:27.09:547,27,0	1/1:1,29:33:96.20:1623,96,0	0/0:11,0:11:30.10:0,30,480	0/0:17,0:17:48.16:0,48,782	0/0:15,0:15:45.15:0,45,729	1/1:1,13:15:36.10:728,36,0	0/0:15,0:15:39.13:0,39,635	1/1:0,9:9:27.09:546,27,0	0/0:15,0:15:45.15:0,45,731	0/0:11,0:11:33.11:0,33,537	0/0:15,0:15:45.15:0,45,732	1/1:0,13:13:36.12:724,36,0	0/0:17,0:17:48.16:0,48,770	0/0:17,0:17:45.15:0,45,727	1/1:1,16:17:36.12:729,36,0	1/1:0,8:8:18.06:363,18,0	0/0:12,0:12:33.11:0,33,530	0/0:16,0:16:45.02:0,45,623	0/0:19,0:19:54.07:0,54,771	1/1:0,30:30:90.30:1778,90,0	0/0:17,0:17:42.13:0,42,660	1/1:0,23:23:54.19:1095,54,0
chr10	88282859	.	CACTGGTCT	C	4028.84	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.022;DP=455;FS=19.763;HRun=0;HaplotypeScore=128.9836;InbreedingCoeff=0.9813;MQ=89.82;MQ0=0;MQRankSum=-9.962;QD=79.00;ReadPosRankSum=1.994;VQSLOD=2.3129;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,5027	0/0:4,0:4:12.04:0,12,555	0/0:17,0:17:51.18:0,51,2140	0/0:25,0:25:51.71:0,52,2684	0/0:13,0:13:30.10:0,30,1336	1/1:0,12:12:36.12:1063,36,0	1/1:0,5:5:12.04:349,12,0	0/0:29,0:29:87.29:0,87,3527	0/0:16,0:16:48.16:0,48,2040	0/0:15,0:15:45.11:0,45,1717	0/0:9,0:9:27.09:0,27,1250	1/1:1,11:13:39.11:1032,39,0	0/0:10,0:10:30.10:0,30,1377	1/1:1,8:9:27.08:709,27,0	0/0:10,0:10:27.09:0,27,1098	0/0:19,0:19:57.20:0,57,2618	0/0:18,0:18:54.19:0,54,2500	1/1:0,5:6:18.06:489,18,0	0/0:23,0:23:69.24:0,69,2975	0/0:14,0:14:42.14:0,42,1923	0/0:28,0:28:81.28:0,81,3543	1/1:0,6:6:15.05:387,15,0	0/0:9,0:9:24.08:0,24,1023	0/0:33,0:33:99:0,99,4399	0/0:17,0:17:51.16:0,51,1997	0/0:20,0:20:60.21:0,60,2756	0/0:22,0:22:66.18:0,66,2718	0/0:14,0:14:39.13:0,39,1806
chr10	88282870	.	C	CAAA	2828.54	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.916;DP=437;FS=13.987;HRun=0;HaplotypeScore=83.8969;InbreedingCoeff=0.9770;MQ=91.52;MQ0=0;MQRankSum=-10.485;QD=60.18;ReadPosRankSum=2.429;VQSLOD=4.9925;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1957	0/0:5,0:5:12.04:0,12,224	0/0:14,0:14:42.14:0,42,756	0/0:29,0:28:75.63:0,76,1288	0/0:12,0:12:33.11:0,33,615	1/1:0,12:12:36.12:826,36,0	1/1:1,5:6:15.04:295,15,0	0/0:21,0:21:63.22:0,63,1155	0/0:15,0:15:42.14:0,42,772	0/0:12,0:12:33.11:0,33,615	0/0:10,0:10:30.10:0,30,546	1/1:0,11:11:33.11:741,33,0	0/0:15,0:15:39.13:0,39,726	1/1:0,8:8:24.08:528,24,0	0/0:7,0:7:18.06:0,18,335	0/0:19,0:19:57.19:0,57,1044	0/0:18,0:18:54.19:0,54,995	1/1:1,5:6:15.05:352,15,0	0/0:22,0:22:63.22:0,63,1162	0/0:16,0:16:48.11:0,48,828	0/0:28,0:28:81.26:0,81,1464	1/1:0,4:4:12.04:271,12,0	0/0:6,0:6:18.06:0,18,328	0/0:37,0:37:99:0,105,1945	0/0:15,0:15:45.15:0,45,838	0/0:21,0:21:63.21:0,63,1147	0/0:17,0:17:51.14:0,51,914	0/0:15,0:15:38.87:0,39,726
chr10	88283101	.	CGTGTGTGTGTGTGTGTGTGTGTGT	C	1029.74	PASS	AB=0.851;AC=11;AF=0.212;AN=52;BaseQRankSum=6.380;DP=452;FS=13.030;HRun=0;HaplotypeScore=248.9502;InbreedingCoeff=0.2108;MQ=55.11;MQ0=24;MQRankSum=-4.028;QD=9.62;ReadPosRankSum=0.916;VQSLOD=1.2653;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:26:31.74:0,32,2078	0/0:6,0:5:12.04:0,12,704	0/0:26,0:16:3.01:0,3,88	0/0:23,0:16:3.01:0,3,34	0/0:15,0:16:3.01:0,3,68	1/1:14,3:16:6.02:289,6,0	./.	0/0:29,0:29:22.30:0,22,270	0/1:10,0:15:13.08:82,0,13	0/0:12,0:12:21.07:0,21,1283	0/0:8,0:8:12.04:0,12,747	1/1:9,4:14:3.01:69,3,0	0/1:9,0:9:9.08:9,0,19	1/1:0,5:6:3.01:185,3,0	0/0:6,0:10:6.02:0,6,113	0/1:12,0:16:99:205,0,211	0/0:28,0:25:29.22:0,29,1995	0/0:14,0:12:3.44:0,3,21	0/0:18,0:18:15.75:0,16,179	0/0:15,0:16:6.41:0,6,135	0/0:26,0:26:21.03:0,21,577	./.	0/0:12,0:12:9.03:0,9,204	0/1:15,0:15:11.47:11,0,47	0/0:14,0:14:12.03:0,12,299	0/0:13,0:11:15.04:0,15,538	0/1:9,0:13:3.92:316,0,4	0/0:11,0:10:12.04:0,12,449
chr10	88283204	.	GGT	G	590.06	PASS	AB=0.966;AC=18;AF=0.321;AN=56;BaseQRankSum=4.082;DP=528;FS=15.464;HRun=0;HaplotypeScore=86.9258;InbreedingCoeff=0.4127;MQ=53.64;MQ0=42;MQRankSum=-4.338;QD=2.46;ReadPosRankSum=-0.385;VQSLOD=0.8603;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:24:54.22:0,54,818	0/0:6,0:6:15.04:0,15,220	0/1:16,0:8:23.92:24,0,152	0/1:48,1:17:42.70:43,0,127	0/0:19,0:19:39.03:0,39,544	1/1:18,1:17:8.43:37,8,0	0/0:30,0:26:12.48:0,12,87	1/1:25,4:28:24.39:207,24,0	0/0:20,0:20:16.80:0,17,464	0/0:15,0:15:44.68:0,45,595	0/0:11,0:10:22.12:0,22,378	1/1:11,0:11:3.71:25,4,0	0/0:8,0:8:9.38:0,9,158	0/1:14,3:17:12.75:13,0,31	0/0:15,0:15:29.83:0,30,398	0/0:22,0:21:45.03:0,45,680	0/0:20,0:17:33.24:0,33,608	1/1:8,0:8:1.65:34,2,0	0/0:17,0:16:22.28:0,22,506	0/0:18,0:18:38.79:0,39,554	0/1:15,0:13:5.87:6,0,81	1/1:21,2:22:3.66:83,4,0	0/0:20,0:20:41.91:0,42,528	0/0:24,0:19:20.97:0,21,266	0/0:16,0:15:29.96:0,30,402	0/1:19,0:17:7.28:117,0,7	0/1:16,0:15:19.17:19,0,316	1/1:15,1:14:19.32:158,19,0
chr10	88283712	.	A	AGT	5485.23	PASS	AB=0.834;AC=29;AF=0.518;AN=56;BaseQRankSum=-4.913;DP=606;FS=7.646;HRun=0;HaplotypeScore=91.3396;InbreedingCoeff=0.6322;MQ=69.09;MQ0=2;MQRankSum=-0.563;QD=14.55;ReadPosRankSum=0.389;VQSLOD=4.2970;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:23:47.92:0,48,512	0/0:9,0:9:21.06:0,21,245	0/1:32,0:20:25.07:25,0,68	0/0:20,0:15:12.29:0,12,116	0/1:20,19:41:21.20:847,0,21	0/0:21,0:21:48.06:0,48,522	0/0:24,0:24:50.98:0,51,572	0/1:33,0:37:4.07:148,0,4	0/1:10,12:22:42.88:300,0,43	0/0:26,0:26:53.83:0,54,605	0/0:17,0:18:23.56:0,24,224	0/1:21,1:23:34.26:34,0,325	1/1:8,0:20:26.99:235,27,0	0/0:14,0:14:24.07:0,24,280	1/1:7,12:19:27.09:418,27,0	1/1:9,14:23:33.11:517,33,0	0/0:19,0:21:47.78:0,48,504	0/0:24,0:25:47.97:0,48,537	1/1:9,13:24:13.03:565,13,0	1/1:3,15:17:33.11:517,33,0	1/1:10,2:25:18.01:178,18,0	0/0:24,0:28:47.62:0,48,487	1/1:6,0:11:15:131,15,0	1/1:5,0:9:10.78:70,11,0	1/1:8,12:20:26.17:551,26,0	1/1:6,0:15:28.24:239,28,0	1/1:12,16:30:41.83:656,42,0	1/1:2,0:6:6.47:54,6,0
chr10	88284292	.	A	ACACC	12345.83	PASS	AB=0.552;AC=41;AF=0.732;AN=56;BaseQRankSum=11.039;DP=489;FS=5.852;HRun=0;HaplotypeScore=106.9348;InbreedingCoeff=0.8988;MQ=72.28;MQ0=0;MQRankSum=-11.347;QD=39.07;ReadPosRankSum=-2.653;VQSLOD=4.3846;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,2529	0/0:12,0:12:36.12:0,36,710	0/0:31,0:30:85.82:0,86,1530	0/0:21,0:19:57.18:0,57,1015	1/1:3,9:15:14.14:320,14,0	1/1:3,6:15:36.12:877,36,0	1/1:1,11:19:36.07:783,36,0	1/1:7,12:24:68.97:1071,69,0	1/1:2,1:10:27.09:484,27,0	0/0:16,0:16:42.14:0,42,822	0/0:25,0:25:72.25:0,72,1434	1/1:1,0:14:36.11:612,36,0	1/1:5,1:14:25.64:464,26,0	1/1:5,3:13:26.98:587,27,0	1/1:5,1:13:15.05:268,15,0	1/1:6,0:15:25.11:462,25,0	0/0:23,0:23:69.24:0,69,1376	1/1:1,8:15:36.12:863,36,0	1/1:8,0:8:18.01:304,18,0	1/1:3,12:23:54:1131,54,0	1/1:10,2:15:23.96:404,24,0	1/1:6,3:14:22.46:443,22,0	1/1:9,0:13:32.63:478,33,0	1/1:9,0:14:26.53:383,27,0	1/1:0,0:11:24.08:389,24,0	0/1:3,5:16:70.75:590,0,71	1/1:4,8:18:23.99:699,24,0	1/1:5,6:16:26.01:736,26,0
chr10	88284293	.	C	CA	2826.49	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=12.696;DP=477;FS=2.762;HRun=4;HaplotypeScore=117.3543;InbreedingCoeff=0.8317;MQ=72.50;MQ0=0;MQRankSum=-9.450;QD=9.33;ReadPosRankSum=-1.254;VQSLOD=0.4107;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,1828	0/0:12,0:12:36.12:0,36,503	0/0:31,0:30:85.27:0,85,1143	0/0:22,0:20:57.05:0,57,737	1/1:14,0:14:14.68:91,15,0	1/1:14,0:14:21.14:167,21,0	1/1:20,0:20:23.06:153,23,0	1/1:23,1:24:54.53:412,55,0	1/1:10,0:10:16.43:118,16,0	0/0:15,0:15:42.14:0,42,584	0/0:24,0:24:72.24:0,72,996	1/1:12,1:13:34.65:230,35,0	1/1:13,0:13:13.52:87,14,0	1/1:12,1:13:25.19:155,25,0	1/1:13,0:13:4.88:46,5,0	1/1:14,0:14:6.20:89,6,0	0/0:23,0:23:69.23:0,69,964	1/1:15,0:15:24.77:183,25,0	1/1:7,0:7:17.43:127,17,0	1/1:21,0:21:33.02:211,33,0	1/1:16,0:16:15.94:103,16,0	1/1:12,2:14:4.82:76,5,0	1/1:13,0:13:20.71:139,21,0	1/1:14,0:14:24.91:158,25,0	1/1:12,0:12:22.49:134,22,0	0/1:11,0:11:60.09:92,0,60	1/1:16,0:16:14.15:124,14,0	1/1:16,0:15:18.11:134,18,0
chr10	88284426	.	TGA	T	3698.84	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=3.866;DP=577;FS=11.123;HRun=0;HaplotypeScore=97.7619;InbreedingCoeff=0.8356;MQ=71.55;MQ0=19;MQRankSum=-5.838;QD=9.68;ReadPosRankSum=1.791;VQSLOD=2.3620;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:89.39:0,89,722	0/0:12,0:12:29.33:0,29,273	0/0:46,0:26:59.03:0,59,622	0/0:38,0:20:53.67:0,54,584	1/1:20,0:20:11.90:86,12,0	1/1:4,23:26:6.02:85,6,0	1/1:30,0:30:19.49:317,19,0	1/1:20,0:19:53.79:435,54,0	1/1:17,0:17:11.84:100,12,0	0/0:15,0:15:33.96:0,34,334	0/0:20,0:19:44.69:0,45,470	1/1:0,17:17:12.04:171,12,0	1/1:14,1:14:35.81:276,36,0	1/1:3,22:25:9.02:111,9,0	1/1:11,0:11:3:25,3,0	1/1:19,0:19:26.97:224,27,0	0/0:28,0:27:74.92:0,75,825	1/1:12,1:13:35.74:291,36,0	1/1:15,0:10:26.78:201,27,0	1/1:25,0:25:26.85:206,27,0	1/1:27,0:27:3:27,3,0	1/1:12,0:12:6.58:137,7,0	1/1:16,0:16:2.94:18,3,0	1/1:14,0:14:23.95:194,24,0	1/1:13,0:13:11.99:99,12,0	1/1:14,0:14:9.56:269,10,0	1/1:18,0:18:17.84:148,18,0	1/1:13,0:12:35.85:277,36,0
chr10	88284428	.	AGAGTGTGTGTGTGTGT	A	6734.43	PASS	AB=0.978;AC=28;AF=0.500;AN=56;BaseQRankSum=0.523;DP=587;FS=10.750;HRun=0;HaplotypeScore=190.2314;InbreedingCoeff=0.4682;MQ=70.36;MQ0=21;MQRankSum=-4.832;QD=22.91;ReadPosRankSum=2.854;VQSLOD=3.1939;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:95.73:0,96,2555	0/0:13,0:13:32.43:0,32,1252	0/0:45,0:25:59.14:0,59,726	0/0:38,0:20:54.91:0,55,615	1/1:0,21:21:12.04:544,12,0	0/0:26,0:25:8.90:0,9,492	0/1:25,0:30:99:253,0,1795	0/1:25,0:24:99:241,0,1028	1/1:0,17:17:11.44:568,11,0	0/0:15,0:15:42.13:0,42,1788	0/0:19,0:17:44.78:0,45,1834	0/0:17,0:17:12.04:0,12,634	1/1:10,3:12:35.88:715,36,0	0/0:22,0:23:9.50:0,10,434	1/1:1,0:13:3.01:83,3,0	1/1:0,19:20:26.77:1221,27,0	0/0:31,0:30:84.50:0,84,3501	0/1:11,0:13:67.81:68,0,765	1/1:14,0:9:26.78:201,27,0	1/1:1,24:25:8.25:978,8,0	0/0:5,0:28:3.01:0,3,116	0/1:14,0:14:6.80:7,0,1650	1/1:1,16:16:3.01:80,3,0	1/1:14,0:14:23.95:194,24,0	1/1:0,0:13:12.04:489,12,0	0/1:13,0:13:68.41:68,0,1023	1/1:1,18:19:17.72:852,18,0	0/1:13,0:12:99:171,0,122
chr10	88287202	.	TA	T	1804.67	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=3.867;DP=514;FS=1.479;HRun=8;HaplotypeScore=84.3226;InbreedingCoeff=0.7304;MQ=76.37;MQ0=3;MQRankSum=-0.594;QD=15.29;ReadPosRankSum=-0.695;VQSLOD=3.7031;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.11:0,48,553	0/0:16,0:16:42.13:0,42,506	0/0:14,1:11:12.51:0,13,134	0/0:19,0:17:16.13:0,16,132	0/0:30,0:30:53.29:0,53,302	1/1:1,16:17:42.07:405,42,0	1/1:2,16:18:42.07:405,42,0	0/0:28,0:28:69.20:0,69,815	0/0:15,0:15:14.38:0,14,130	0/0:37,0:37:99:0,99,1149	0/0:27,0:27:69.19:0,69,813	1/1:2,10:12:27.04:260,27,0	0/1:14,0:14:10.05:10,0,101	1/1:4,12:16:32.65:318,33,0	0/0:17,0:17:40.82:0,41,177	0/0:11,0:11:2.30:0,2,81	0/0:10,0:10:30.08:0,30,349	1/1:3,16:19:45.07:434,45,0	0/0:13,0:13:9.51:0,10,84	0/0:28,0:28:44.01:0,44,249	0/0:9,0:9:27.08:0,27,326	1/1:2,6:8:17.88:145,18,0	0/1:14,0:14:14.82:15,0,92	0/0:6,0:6:16.55:0,17,72	0/0:20,0:20:50.79:0,51,556	0/0:40,0:40:99:0,105,1193	0/0:18,0:18:0.97:0,1,152	0/0:19,0:19:54.15:0,54,640
chr10	88287351	.	C	CA	1083.44	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.495;DP=622;FS=0.000;HRun=1;HaplotypeScore=68.0507;InbreedingCoeff=0.9938;MQ=89.64;MQ0=0;MQRankSum=-3.571;QD=34.95;ReadPosRankSum=0.714;VQSLOD=3.4724;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1420	0/0:9,0:9:24.08:0,24,312	0/0:20,0:20:55.06:0,55,701	0/0:27,0:27:69.19:0,69,869	0/0:21,0:21:57.13:0,57,707	0/0:18,0:18:51.15:0,51,647	0/0:26,0:26:78.24:0,78,998	0/0:39,0:39:99:0,111,1395	0/0:23,0:23:69.22:0,69,895	0/0:27,0:27:78.25:0,78,1013	0/0:29,0:29:87.11:0,87,1104	0/0:21,0:21:63.20:0,63,818	0/0:14,0:14:39.13:0,39,506	0/0:25,0:25:75.22:0,75,945	0/0:26,0:26:75.24:0,75,961	0/0:24,0:24:72.22:0,72,921	0/0:18,0:18:51.15:0,51,646	0/0:24,0:24:60.17:0,60,763	0/0:26,0:26:72.21:0,72,897	0/0:17,0:17:51.17:0,51,662	0/0:25,0:25:66.19:0,66,830	0/0:18,0:18:54.16:0,54,687	0/0:13,0:13:39.13:0,39,506	0/0:20,0:20:60.19:0,60,778	1/1:3,28:31:81.23:1178,81,0	0/0:18,0:18:54.18:0,54,700	0/0:19,0:19:57.19:0,57,739	0/0:7,0:7:21.07:0,21,273
chr10	88288744	.	AT	A	319.63	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.822;DP=419;FS=0.000;HRun=1;HaplotypeScore=48.9012;InbreedingCoeff=0.8001;MQ=67.04;MQ0=0;MQRankSum=-0.606;QD=19.98;ReadPosRankSum=1.166;VQSLOD=3.6761;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:24.08:0,24,335	0/0:6,0:6:18.05:0,18,234	0/0:6,0:5:12.03:0,12,146	0/0:3,0:3:1.37:0,1,10	0/0:20,0:20:60.19:0,60,819	0/0:27,0:27:81.21:0,81,1065	0/0:11,0:11:33.07:0,33,401	0/0:25,0:25:75.23:0,75,1016	0/0:18,0:18:51.15:0,51,693	0/0:16,0:16:48.13:0,48,609	0/0:16,0:16:44.98:0,45,577	0/0:14,0:14:42.14:0,42,584	0/0:13,0:13:39.09:0,39,520	0/0:19,0:19:57.13:0,57,738	0/0:23,0:23:69.22:0,69,944	0/0:19,0:19:57.16:0,57,760	0/0:27,0:27:81.17:0,81,1033	0/0:20,0:20:60.14:0,60,798	0/0:10,0:10:30.08:0,30,389	0/0:11,0:11:33.10:0,33,444	0/0:7,0:7:21.07:0,21,293	0/0:13,0:13:39.12:0,39,524	0/0:9,0:9:27.09:0,27,376	0/0:8,0:8:24.06:0,24,314	1/1:1,15:16:33:414,33,0	0/0:26,0:26:78.17:0,78,1000	0/0:19,0:19:56.71:0,57,706	0/0:9,0:9:27.03:0,27,336
chr10	88290175	.	C	CA	9679.89	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-15.253;DP=653;FS=4.722;HRun=7;HaplotypeScore=60.8464;InbreedingCoeff=0.9979;MQ=84.75;MQ0=0;MQRankSum=-1.840;QD=27.34;ReadPosRankSum=1.578;VQSLOD=5.7421;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,153,1462	0/0:11,0:11:30.05:0,30,289	0/0:20,0:20:33.02:0,33,316	0/0:22,0:22:38.70:0,39,353	1/1:1,22:23:60.14:708,60,0	1/1:0,21:21:48.15:580,48,0	1/1:3,24:27:48.15:580,48,0	0/0:21,0:21:39.02:0,39,367	1/1:3,19:22:57.17:681,57,0	0/0:21,0:21:57.07:0,57,545	0/0:20,0:20:57.09:0,57,550	1/1:2,25:27:66.20:797,66,0	1/1:2,18:20:16.16:478,16,0	1/1:1,14:15:36.11:435,36,0	1/1:1,26:28:75.10:884,75,0	1/1:4,22:26:63.19:761,63,0	0/0:47,0:47:99:0,126,1197	1/1:3,22:25:48.11:563,48,0	1/1:4,20:25:63:700,63,0	1/1:3,17:20:48.11:563,48,0	0/0:22,0:22:60.07:0,60,574	1/1:2,11:13:27.08:326,27,0	1/1:5,15:20:41.92:502,42,0	1/1:2,13:15:30.09:362,30,0	0/0:25,0:25:75.11:0,75,719	0/0:24,0:24:69.10:0,69,661	1/1:5,21:27:63.19:758,63,0	0/0:15,0:15:45.06:0,45,428
chr10	88290489	.	G	GGC	4734.20	PASS	AB=0.972;AC=30;AF=0.536;AN=56;BaseQRankSum=12.455;DP=521;FS=1.157;HRun=0;HaplotypeScore=114.1080;InbreedingCoeff=0.7801;MQ=71.63;MQ0=0;MQRankSum=-1.822;QD=16.16;ReadPosRankSum=5.294;VQSLOD=4.9525;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:91.99:0,92,1206	0/0:9,0:9:27.09:0,27,395	0/0:22,0:14:31.80:0,32,362	0/0:18,0:17:21.14:0,21,242	1/1:29,0:29:58.28:544,58,0	1/1:10,1:11:7.78:57,8,0	1/1:16,3:19:25.16:278,25,0	0/0:25,0:25:60.18:0,60,846	1/1:14,0:14:35.76:287,36,0	0/0:16,0:16:42.12:0,42,603	0/0:15,0:15:39.10:0,39,564	0/1:11,0:11:11.26:14,0,11	1/1:18,0:18:23.94:337,24,0	1/1:9,2:11:1.57:30,2,0	1/1:23,0:23:49.42:488,49,0	1/1:22,0:22:62.17:466,62,0	0/0:33,0:33:99:0,99,1363	1/1:18,0:18:1.66:79,2,0	1/1:15,0:15:29.43:294,29,0	1/1:19,0:19:31.31:319,31,0	0/0:13,0:13:33.11:0,33,493	0/1:16,1:17:41.40:47,0,41	1/1:19,0:19:47.41:439,47,0	1/1:22,0:21:46.95:434,47,0	0/0:6,0:6:6.01:0,6,58	0/0:20,0:20:51.11:0,51,714	1/1:25,0:25:68.86:622,69,0	0/0:16,0:16:45.14:0,45,666
chr10	88290490	.	G	GC	1574.78	PASS	AB=0.918;AC=25;AF=0.446;AN=56;BaseQRankSum=13.432;DP=527;FS=59.748;HRun=0;HaplotypeScore=114.3841;InbreedingCoeff=0.6622;MQ=71.52;MQ0=0;MQRankSum=-2.485;QD=5.73;ReadPosRankSum=5.601;VQSLOD=0.7519;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:92.88:0,93,1147	0/0:9,0:9:27.08:0,27,359	0/0:22,0:14:10.97:0,11,323	0/0:16,0:17:25.10:0,25,256	1/1:28,0:28:31.44:168,31,0	0/1:9,3:12:4.61:55,0,5	0/1:18,1:19:14.56:93,0,15	0/0:29,0:29:62.96:0,63,822	1/1:14,0:14:23.14:107,23,0	0/0:16,0:16:42.12:0,42,557	0/0:15,0:15:38.96:0,39,507	0/1:11,1:12:5.97:6,0,32	1/1:18,0:18:11.48:121,11,0	0/1:10,1:11:2.16:2,0,18	1/1:24,0:24:35.26:169,35,0	1/1:22,0:22:33.83:137,34,0	0/0:33,0:33:99:0,99,1308	0/0:18,0:18:6.31:0,6,57	1/1:14,0:14:25.58:160,26,0	1/1:18,0:18:22.92:133,23,0	0/0:13,0:13:32.85:0,33,448	0/1:17,0:17:26.95:27,0,40	1/1:19,0:19:36.74:186,37,0	1/1:22,0:21:40.29:180,40,0	0/0:6,0:6:5.78:0,6,32	0/0:21,0:21:51.10:0,51,644	1/1:25,0:25:49.41:240,49,0	0/0:17,0:17:45.12:0,45,606
chr10	88290495	.	G	GGA	8517.37	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=6.896;DP=534;FS=0.000;HRun=0;HaplotypeScore=96.8154;InbreedingCoeff=0.6736;MQ=69.63;MQ0=0;MQRankSum=-1.522;QD=31.09;ReadPosRankSum=8.174;VQSLOD=6.2618;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:80.79:0,81,998	0/0:9,0:9:23.77:0,24,285	0/0:20,0:12:32.45:0,32,341	0/0:18,0:17:34.16:0,34,371	1/1:1,29:30:72.19:1167,72,0	0/0:13,0:13:10.98:0,11,94	0/1:21,0:21:99:108,0,159	0/0:31,0:31:77.84:0,78,944	1/1:0,16:16:33.11:568,33,0	0/0:18,0:18:42.14:0,42,616	0/0:16,0:16:42.10:0,42,562	0/1:14,0:14:11.76:12,0,119	1/1:1,15:16:39.06:633,39,0	0/1:10,0:10:13.41:13,0,18	1/1:0,26:26:63.15:1049,63,0	1/1:2,23:27:60.19:1020,60,0	0/0:27,0:27:78.20:0,78,1095	0/1:17,0:17:46.08:56,0,46	1/1:1,12:13:36.10:581,36,0	1/1:1,16:17:42.08:659,42,0	0/0:15,0:15:33.54:0,34,423	0/0:17,0:17:0.54:0,1,121	1/1:1,18:19:42.04:700,42,0	1/1:1,21:21:48.16:823,48,0	0/0:7,0:7:11.20:0,11,73	0/0:20,0:20:42.05:0,42,510	1/1:0,26:26:66.23:1129,66,0	0/0:19,0:19:57.07:0,57,732
chr10	88290909	.	AT	A	6190.63	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=1.644;DP=522;FS=1.172;HRun=10;HaplotypeScore=60.4697;InbreedingCoeff=0.9690;MQ=64.55;MQ0=3;MQRankSum=0.881;QD=20.10;ReadPosRankSum=3.600;VQSLOD=5.7481;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:26:34.06:0,34,582	0/0:8,0:8:11.93:0,12,115	0/0:12,0:8:9.02:0,9,93	0/0:6,0:5:8.99:0,9,83	1/1:2,25:27:68.98:599,69,0	1/1:5,17:21:47.98:417,48,0	1/1:2,14:15:32.92:278,33,0	0/0:4,0:26:68.08:0,68,338	1/1:2,18:20:41.98:364,42,0	0/0:21,0:21:51.10:0,51,551	0/0:21,0:20:45.12:0,45,498	1/1:0,15:15:41.99:364,42,0	1/1:3,8:11:20.98:182,21,0	1/1:3,13:16:29.99:260,30,0	1/1:0,27:27:68.99:599,69,0	1/1:2,16:18:41.99:365,42,0	0/0:25,0:25:69.16:0,69,744	1/1:3,18:21:42.52:454,43,0	1/1:4,15:18:11.80:331,12,0	1/1:3,14:17:41.89:356,42,0	0/0:2,0:6:11.36:0,11,57	1/1:1,15:17:47.21:398,47,0	1/1:1,17:18:44.99:390,45,0	1/1:0,14:14:35.99:312,36,0	0/0:25,0:24:66.14:0,66,706	0/0:6,0:24:57.27:0,57,328	1/1:5,25:28:59.97:521,60,0	0/0:2,0:13:37.10:0,37,204
chr10	88291661	.	CAT	C	4202.10	PASS	AB=0.923;AC=34;AF=0.607;AN=56;BaseQRankSum=10.653;DP=335;FS=1.050;HRun=0;HaplotypeScore=44.1356;InbreedingCoeff=0.8299;MQ=84.50;MQ0=4;MQRankSum=0.923;QD=22.12;ReadPosRankSum=2.017;VQSLOD=3.5407;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.15:0,48,758	0/0:6,0:6:15.05:0,15,249	0/1:11,0:7:0:0,0,0	0/0:29,0:17:7.97:0,8,58	1/1:5,15:19:33.06:398,33,0	1/1:0,9:9:18.06:227,18,0	1/1:2,3:5:6.02:76,6,0	0/0:31,0:32:72.24:0,72,1171	1/1:2,10:12:24.08:303,24,0	0/0:8,0:8:21.07:0,21,347	0/0:12,0:12:33.11:0,33,542	1/1:3,4:7:12.04:151,12,0	1/1:0,10:10:21.02:247,21,0	1/1:1,5:6:9.03:114,9,0	1/1:2,8:10:21.07:265,21,0	1/1:2,8:10:24.08:302,24,0	0/0:17,0:17:48.15:0,48,752	1/1:1,10:11:21.07:265,21,0	1/1:4,14:18:42.08:486,42,0	1/1:1,9:10:24.08:303,24,0	0/0:5,0:5:15.05:0,15,243	1/1:1,2:3:6.02:76,6,0	1/1:3,7:10:14.94:189,15,0	1/1:2,4:6:12.04:151,12,0	0/0:6,0:6:14.61:0,15,243	0/0:13,0:13:33.11:0,33,549	1/1:3,18:21:47.94:606,48,0	0/1:9,2:11:42.59:43,0,376
chr10	88292250	.	TCCTCCACCGAAGCTG	T	6066.11	PASS	AC=30;AF=0.556;AN=54;BaseQRankSum=8.489;DP=523;FS=17.819;HRun=0;HaplotypeScore=183.9015;InbreedingCoeff=0.8592;MQ=65.81;MQ0=3;MQRankSum=-8.972;QD=20.09;ReadPosRankSum=2.959;VQSLOD=2.4161;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:27.01:0,27,821	0/0:4,0:4:12.04:0,12,460	0/0:11,0:7:14.24:0,14,125	0/0:18,0:18:31.56:0,32,283	1/1:3,3:6:3.90:97,4,0	1/1:2,12:14:3.01:125,3,0	1/1:24,1:25:41.84:473,42,0	0/0:19,0:19:30.04:0,30,387	1/1:7,17:24:14.92:551,15,0	0/0:15,0:15:21.06:0,21,691	0/0:6,0:6:12.04:0,12,465	1/1:23,5:28:47.87:935,48,0	1/1:8,17:25:9.03:376,9,0	1/1:5,16:21:21.07:805,21,0	1/1:20,3:23:30.03:801,30,0	1/1:6,18:24:18.06:691,18,0	0/0:44,0:44:95.57:0,96,3274	1/1:13,20:33:5.97:67,6,0	1/1:14,0:14:17.88:182,18,0	1/1:5,3:7:8.95:71,9,0	0/0:51,0:51:99:0,102,3295	1/1:4,4:8:3.01:97,3,0	./.	1/1:10,25:35:9.03:309,9,0	0/0:10,0:10:15.04:0,15,483	0/0:8,0:8:12.02:0,12,292	1/1:8,6:13:12.04:486,12,0	0/0:6,0:6:17.94:0,18,306
chr10	88293105	.	T	TA	7046.71	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=15.040;DP=453;FS=27.217;HRun=7;HaplotypeScore=58.9334;InbreedingCoeff=0.9749;MQ=70.13;MQ0=0;MQRankSum=-1.429;QD=28.88;ReadPosRankSum=1.134;VQSLOD=3.0494;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.09:0,54,522	0/0:9,0:9:21.03:0,21,202	0/0:9,0:9:8.34:0,8,109	0/0:5,0:5:8.23:0,8,65	1/1:0,18:18:48.15:580,48,0	1/1:5,21:26:54.17:652,54,0	1/1:0,10:10:24.07:290,24,0	0/0:36,0:35:96.15:0,96,927	1/1:1,11:12:33.10:399,33,0	0/0:17,0:17:42.06:0,42,406	0/0:31,0:31:84.13:0,84,811	1/1:2,12:14:30.09:362,30,0	1/1:3,11:14:30.09:360,30,0	1/1:0,12:12:33.10:399,33,0	1/1:2,18:20:51.16:616,51,0	1/1:0,9:9:21.06:254,21,0	0/0:13,0:13:36.04:0,36,342	1/1:2,15:17:39.12:471,39,0	1/1:0,8:8:21.06:254,21,0	1/1:3,20:23:57.13:670,57,0	0/0:13,0:13:33.05:0,33,319	1/1:1,5:6:15.05:181,15,0	1/1:2,13:15:33.10:399,33,0	1/1:2,7:9:18.06:217,18,0	0/0:21,0:21:57.09:0,57,550	0/0:28,0:28:78.12:0,78,753	1/1:2,29:31:78.24:942,78,0	0/0:7,0:7:21.03:0,21,203
chr10	88293940	.	AT	A	8893.47	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=15.367;DP=644;FS=8.777;HRun=8;HaplotypeScore=71.3870;InbreedingCoeff=0.9988;MQ=80.04;MQ0=0;MQRankSum=0.177;QD=24.98;ReadPosRankSum=3.841;VQSLOD=5.4729;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1376	0/0:6,0:6:18.06:0,18,217	0/0:16,0:16:42.11:0,42,483	0/0:14,0:14:36:0,36,396	1/1:1,20:21:54.08:521,54,0	1/1:2,21:23:60.10:579,60,0	1/1:1,19:20:57.09:550,57,0	0/0:29,0:29:69.21:0,69,834	1/1:2,14:16:39.06:377,39,0	0/0:29,0:29:84.24:0,84,998	0/0:19,0:19:57.17:0,57,688	1/1:1,27:28:81.13:782,81,0	1/1:1,16:17:45.07:435,45,0	1/1:4,20:24:51.08:492,51,0	1/1:2,33:35:93.15:899,93,0	1/1:2,22:24:66.11:637,66,0	0/0:23,0:23:60.18:0,60,725	1/1:1,13:14:33.05:319,33,0	1/1:4,20:24:57.09:550,57,0	1/1:0,24:24:72.12:695,72,0	0/0:36,0:36:99:0,102,1232	1/1:1,16:17:42.06:406,42,0	1/1:0,17:17:51.08:492,51,0	1/1:2,20:22:48.07:464,48,0	0/0:31,0:31:87.25:0,87,1028	0/0:32,0:32:96.28:0,96,1150	1/1:1,29:30:72.02:695,72,0	0/0:13,0:13:36.10:0,36,425
chr10	88296280	.	AAC	A	8356.14	PASS	AB=0.859;AC=32;AF=0.571;AN=56;BaseQRankSum=5.666;DP=822;FS=4.501;HRun=0;HaplotypeScore=188.1319;InbreedingCoeff=0.6802;MQ=53.79;MQ0=12;MQRankSum=3.318;QD=15.71;ReadPosRankSum=2.054;VQSLOD=4.4713;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:38,4:42:29.11:29,0,1142	0/1:11,1:12:17.14:17,0,189	0/0:44,0:10:3.01:0,3,45	0/0:41,0:19:15.03:0,15,209	1/1:8,18:28:42.12:493,42,0	0/0:7,0:29:5.01:0,5,71	0/0:13,0:37:3.71:0,4,86	1/1:16,27:47:56.88:899,57,0	1/1:16,14:31:39.20:613,39,0	0/0:30,0:30:61.44:0,61,922	0/0:18,0:18:42.14:0,42,651	0/0:6,0:24:20.12:0,20,129	1/1:7,18:25:31.80:389,32,0	0/0:12,0:27:13.48:0,13,113	1/1:5,18:23:42.12:492,42,0	1/1:6,17:24:42.12:492,42,0	0/0:27,1:28:49.18:0,49,1095	0/0:5,0:12:15.47:0,15,132	1/1:19,11:28:30.53:336,31,0	0/1:6,11:18:6.98:222,0,7	1/1:19,65:85:99:1607,141,0	0/1:7,0:28:0.87:1,0,55	1/1:4,16:21:32.83:350,33,0	1/1:8,22:30:53.99:633,54,0	1/1:4,9:15:23.73:239,24,0	1/1:11,18:29:46.94:564,47,0	1/1:6,15:22:50.60:549,51,0	1/1:7,14:21:38.48:430,38,0
chr10	88297944	.	TTC	T	110.46	PASS	AB=0.932;AC=13;AF=0.250;AN=52;BaseQRankSum=2.417;DP=632;FS=1.838;HRun=0;HaplotypeScore=119.6563;InbreedingCoeff=-0.1513;MQ=52.95;MQ0=27;MQRankSum=-0.176;QD=0.47;ReadPosRankSum=0.410;VQSLOD=2.5074;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:33.75:0,34,376	0/1:10,0:10:2.51:3,0,78	./.	./.	0/1:24,2:26:24.82:25,0,182	0/0:15,0:14:5.04:0,5,32	0/0:27,0:23:10.31:0,10,73	0/0:44,0:41:22.34:0,22,134	0/1:19,0:18:24.94:25,0,230	0/0:29,0:27:12.44:0,12,103	0/0:30,0:23:8.86:0,9,78	0/0:13,0:14:14.91:0,15,116	0/1:19,6:22:77.69:78,0,245	0/1:20,0:19:0.93:1,0,14	0/1:14,2:16:19.16:19,0,73	0/1:23,1:24:1.23:1,0,187	0/0:13,0:13:2.51:0,3,183	0/0:16,0:31:6.37:0,6,158	0/1:15,1:15:8.07:8,0,174	0/0:26,0:26:34.89:0,35,355	0/0:22,0:20:5.66:0,6,29	0/0:24,0:22:14.99:0,15,129	0/1:13,2:15:13.27:13,0,137	0/1:17,2:18:9.10:9,0,218	1/1:12,3:12:7.18:42,7,0	0/0:12,0:20:7.18:0,7,214	0/1:29,2:30:20.98:21,0,319	0/0:13,0:17:10.25:0,10,97
chr10	88298199	.	T	TA	1082.17	PASS	AB=0.987;AC=21;AF=0.457;AN=46;BaseQRankSum=2.813;DP=456;FS=0.000;HRun=10;HaplotypeScore=30.1325;InbreedingCoeff=0.5279;MQ=34.36;MQ0=129;MQRankSum=0.135;QD=4.71;ReadPosRankSum=-1.806;VQSLOD=-0.6819;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:2:3:0,3,25	0/0:7,0:7:11.97:0,12,98	0/1:11,0:3:8.06:17,0,8	0/0:7,0:2:2.20:0,2,7	1/1:6,24:29:9.02:92,9,0	0/0:8,0:5:8.99:0,9,74	./.	./.	1/1:5,12:9:2.94:18,3,0	0/0:25,0:19:50.72:0,51,404	0/1:23,1:22:8.06:8,0,136	0/1:16,0:5:0:0,0,0	1/1:4,12:8:6.01:61,6,0	0/0:12,0:3:5.99:0,6,49	./.	1/1:3,16:8:12.03:128,12,0	./.	0/0:13,0:3:3:0,3,25	1/1:5,10:2:3.01:32,3,0	1/1:4,25:29:44.27:627,44,0	./.	0/0:17,0:16:17.92:0,18,141	1/1:6,11:16:3.01:30,3,0	1/1:1,7:3:3.01:32,3,0	0/0:2,0:11:14.26:0,14,41	0/0:21,0:8:20.95:0,21,170	1/1:4,19:14:20.95:195,21,0	0/0:6,0:2:5.99:0,6,49
chr10	88298498	.	ACGTTACGT	A	12963.63	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.556;DP=554;FS=33.863;HRun=0;HaplotypeScore=130.0708;InbreedingCoeff=0.7752;MQ=75.41;MQ0=0;MQRankSum=-7.794;QD=25.32;ReadPosRankSum=3.625;VQSLOD=2.7989;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,23:31:33.11:854,33,0	1/1:3,3:5:5.98:98,6,0	0/0:16,0:17:23.67:0,24,552	0/0:25,0:25:45.11:0,45,1330	1/1:9,8:16:12:253,12,0	1/1:4,9:10:15.05:388,15,0	1/1:7,15:20:27.09:699,27,0	1/1:8,11:17:27.08:521,27,0	1/1:7,18:14:21.07:544,21,0	1/1:13,13:24:33.10:768,33,0	1/1:4,10:13:18.06:466,18,0	1/1:9,20:23:33.11:854,33,0	1/1:7,18:19:27.09:699,27,0	1/1:3,16:11:18.06:466,18,0	1/1:12,14:22:21.07:544,21,0	1/1:5,14:13:21.07:544,21,0	1/1:13,17:28:39.13:1010,39,0	1/1:7,7:12:12.04:311,12,0	1/1:13,9:22:27.03:461,27,0	1/1:6,4:10:9.03:227,9,0	1/1:17,8:25:12:310,12,0	1/1:6,9:14:15.05:388,15,0	1/1:8,5:12:12.04:311,12,0	1/1:10,13:21:15.05:388,15,0	1/1:9,0:9:6.02:155,6,0	1/1:6,17:19:39.13:928,39,0	1/1:6,22:16:20.89:544,21,0	1/1:2,5:7:9.03:233,9,0
chr10	88298671	.	ATATT	A	5370.36	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-0.813;DP=617;FS=0.833;HRun=0;HaplotypeScore=126.4568;InbreedingCoeff=0.9971;MQ=73.84;MQ0=0;MQRankSum=-0.980;QD=45.51;ReadPosRankSum=2.235;VQSLOD=5.3358;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.22:0,87,1986	0/0:12,0:12:36.07:0,36,795	0/0:17,0:16:26.81:0,27,614	0/0:11,0:11:21.71:0,22,389	0/0:35,0:35:93.26:0,93,1707	1/1:2,17:19:48.16:881,48,0	1/1:0,25:25:60.21:1101,60,0	0/0:32,0:32:84.22:0,84,1547	0/0:12,0:12:36.06:0,36,640	0/0:41,0:41:99:0,108,2522	0/0:23,0:23:63.20:0,63,1536	1/1:0,19:19:45.15:819,45,0	0/0:15,0:15:42.07:0,42,748	1/1:1,12:13:27.09:495,27,0	0/0:16,0:16:45.10:0,45,804	0/0:18,0:18:48.13:0,48,851	0/0:37,0:37:99:0,99,2448	1/1:1,25:26:69.24:1247,69,0	0/0:26,0:26:69.14:0,69,1239	0/0:25,0:24:63.19:0,63,1123	0/0:9,0:9:18.06:0,18,335	1/1:0,16:16:45.15:827,45,0	0/0:20,0:20:54.09:0,54,883	0/0:17,0:17:42.14:0,42,777	0/0:31,0:31:90.28:0,90,2095	0/0:25,0:25:69.15:0,69,1186	0/0:26,0:25:69.24:0,69,1292	0/0:19,0:20:31.69:0,32,672
chr10	88298677	.	A	AT	7168	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-13.543;DP=605;FS=1.444;HRun=9;HaplotypeScore=82.6212;InbreedingCoeff=0.9721;MQ=73.07;MQ0=0;MQRankSum=0.460;QD=24.98;ReadPosRankSum=-0.150;VQSLOD=5.2369;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:86.98:0,87,754	0/0:12,0:12:23.99:0,24,208	0/0:15,0:14:29.88:0,30,241	0/0:11,0:11:3:0,3,77	1/1:3,29:32:84.17:907,84,0	0/0:17,0:17:39.93:0,40,138	0/0:26,0:26:52.78:0,53,199	1/1:8,23:31:46.07:705,46,0	1/1:1,11:13:32.92:344,33,0	0/0:36,0:36:86.94:0,87,752	0/0:24,0:24:59.93:0,60,514	0/0:19,0:19:36.97:0,37,128	1/1:2,15:17:39.11:431,39,0	0/0:13,0:14:18.58:0,19,88	1/1:5,12:17:39.05:410,39,0	1/1:3,14:17:39.11:430,39,0	0/0:37,0:37:99:0,108,931	0/0:27,0:27:60.84:0,61,231	1/1:8,17:25:28.04:516,28,0	1/1:1,22:22:57.11:617,57,0	1/1:1,7:8:15.04:166,15,0	0/0:18,0:18:40.42:0,40,156	1/1:5,14:19:42.11:465,42,0	1/1:4,12:16:33.09:365,33,0	0/0:30,0:30:74.95:0,75,646	1/1:5,21:26:63.10:666,63,0	1/1:1,27:27:69.19:763,69,0	1/1:1,14:15:24.33:384,24,0
chr10	88299626	.	A	AATTT	2812.06	PASS	AB=1.000;AC=37;AF=0.804;AN=46;BaseQRankSum=1.538;DP=329;FS=0.903;HRun=0;HaplotypeScore=53.4918;InbreedingCoeff=0.4785;MQ=67.06;MQ0=0;MQRankSum=-3.598;QD=11.38;ReadPosRankSum=-3.022;VQSLOD=2.0657;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,5:15:6.02:140,6,0	./.	./.	./.	1/1:13,0:13:6.02:105,6,0	1/1:4,7:12:12.04:281,12,0	./.	1/1:46,0:46:47.72:497,48,0	1/1:3,0:7:3.01:52,3,0	0/0:10,0:10:8.62:0,9,102	0/0:15,0:15:15.01:0,15,187	1/1:9,2:11:3.01:70,3,0	1/1:9,0:13:9.03:170,9,0	1/1:6,4:10:9.03:210,9,0	1/1:9,0:12:3.01:52,3,0	1/1:8,0:8:5.95:69,6,0	0/0:21,0:21:33.10:0,33,487	1/1:13,12:26:21.07:491,21,0	1/1:13,0:14:12.03:179,12,0	1/1:4,0:5:3.01:52,3,0	1/1:7,0:7:2.99:23,3,0	./.	1/1:4,0:4:3.01:52,3,0	1/1:6,0:6:2.92:17,3,0	0/0:13,0:13:11.97:0,12,116	0/1:9,0:9:33.95:34,0,37	1/1:9,0:12:6.02:104,6,0	1/1:17,0:17:21.02:359,21,0
chr10	88299796	.	T	TTG	1525.27	PASS	AB=0.833;AC=19;AF=0.339;AN=56;BaseQRankSum=2.356;DP=466;FS=3.941;HRun=0;HaplotypeScore=69.8142;InbreedingCoeff=0.7698;MQ=82.08;MQ0=1;MQRankSum=-1.157;QD=7.70;ReadPosRankSum=-0.430;VQSLOD=2.9863;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:50.67:0,51,509	0/0:4,0:4:11.90:0,12,100	0/0:20,0:16:35.03:0,35,279	0/0:17,0:13:13.67:0,14,96	0/0:8,0:9:20.79:0,21,205	1/1:0,9:20:18.06:249,18,0	1/1:0,3:16:14.91:166,15,0	1/1:24,0:27:47.19:385,47,0	0/0:17,0:17:47.77:0,48,390	0/0:11,0:11:23.93:0,24,238	0/0:11,0:11:23.70:0,24,221	1/1:1,15:22:2.90:16,3,0	0/0:13,0:13:35.74:0,36,346	0/1:0,1:16:0:0,0,0	0/0:15,0:15:45.05:0,45,470	0/0:9,0:9:26.96:0,27,260	0/0:28,0:29:61.72:0,62,654	1/1:1,15:24:26.98:379,27,0	0/0:17,0:17:37.23:0,37,281	0/0:11,0:11:7.70:0,8,237	1/1:14,0:14:14.70:118,15,0	1/1:2,1:11:21.93:169,22,0	0/0:12,0:13:26.76:0,27,279	0/0:33,0:33:64.84:0,65,793	0/1:18,0:18:8.29:8,0,179	0/1:14,0:14:14.85:36,0,15	0/0:15,0:15:33.32:0,33,347	1/1:15,0:15:24.23:196,24,0
chr10	88300542	.	TA	T	3195.78	PASS	AB=0.944;AC=35;AF=0.625;AN=56;BaseQRankSum=9.232;DP=581;FS=8.670;HRun=13;HaplotypeScore=85.1194;InbreedingCoeff=0.8826;MQ=61.57;MQ0=16;MQRankSum=-1.099;QD=8.48;ReadPosRankSum=3.011;VQSLOD=2.5251;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,1:39:53.16:0,53,668	0/0:10,0:10:23.98:0,24,218	0/0:19,0:14:5.89:0,6,40	0/1:16,1:15:13.84:14,0,75	1/1:3,11:17:32.01:199,32,0	1/1:1,0:21:30.56:88,31,0	1/1:0,0:27:38.67:112,39,0	0/0:11,0:11:23.99:0,24,215	1/1:2,18:19:47.64:344,48,0	0/0:19,1:19:5.14:0,5,211	0/0:26,0:26:36.48:0,36,341	1/1:5,0:23:26.45:76,26,0	1/1:1,20:21:41.72:302,42,0	1/1:3,0:24:32.57:94,33,0	1/1:6,22:27:29.06:218,29,0	1/1:5,13:18:35.71:262,36,0	0/0:30,0:31:52.33:0,52,597	1/1:1,0:20:36.66:106,37,0	1/1:2,7:9:20.85:153,21,0	1/1:5,12:19:30.79:201,31,0	0/0:17,1:19:13.92:0,14,273	1/1:4,0:18:20.35:59,20,0	1/1:3,16:20:31.85:225,32,0	1/1:3,32:34:85.56:619,86,0	1/1:2,0:12:18.95:58,19,0	0/0:17,1:16:17.13:0,17,318	1/1:5,17:22:17.59:283,18,0	0/0:9,0:9:21.51:0,22,205
chr10	88300649	.	C	CCCACACACACA	4998.77	PASS	AB=0.749;AC=34;AF=0.607;AN=56;BaseQRankSum=3.641;DP=600;FS=49.956;HRun=0;HaplotypeScore=184.7270;InbreedingCoeff=0.0473;MQ=38.82;MQ0=63;MQRankSum=-0.773;QD=10.39;ReadPosRankSum=-3.863;VQSLOD=1.3418;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:8.61:0,9,169	0/1:4,0:9:2.63:3,0,120	0/1:24,0:3:2.86:3,0,48	0/0:31,0:3:6.01:0,6,63	1/1:10,0:15:2.80:92,3,0	1/1:17,0:17:15.52:332,16,0	1/1:20,0:24:5.16:64,5,0	0/1:19,0:18:99:188,0,373	0/1:19,0:24:94.83:215,0,95	0/0:10,0:13:33.10:0,33,487	0/0:9,0:13:8.64:0,9,139	1/1:13,0:21:5.68:140,6,0	0/1:6,0:18:56.93:389,0,57	0/1:15,0:26:2.73:586,0,3	1/1:19,0:26:11.64:449,12,0	1/1:16,0:25:5.38:181,5,0	0/0:17,0:25:5.47:0,5,407	1/1:7,0:6:9.91:173,10,0	0/1:6,0:8:99:231,0,123	0/1:12,0:21:30.83:105,0,31	1/1:9,0:9:5.66:62,6,0	1/1:17,0:28:12.90:388,13,0	1/1:17,0:19:2.65:70,3,0	1/1:24,0:27:14.69:334,15,0	0/1:6,1:18:4.49:217,0,4	0/1:25,0:28:99:294,0,564	0/1:9,0:19:99:229,0,126	0/1:7,0:10:3.70:254,0,4
chr10	88301857	.	G	GAAA	6072.85	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-5.936;DP=677;FS=10.952;HRun=10;HaplotypeScore=135.3632;InbreedingCoeff=0.9948;MQ=74.84;MQ0=1;MQRankSum=-2.062;QD=29.34;ReadPosRankSum=0.771;VQSLOD=2.4270;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,1168	0/0:14,0:14:42.06:0,42,490	0/0:32,0:27:51.56:0,52,472	0/0:32,0:25:23.89:0,24,419	1/1:7,22:35:62.99:959,63,0	0/0:22,0:22:53.97:0,54,656	0/0:28,0:28:74.99:0,75,882	0/0:25,0:24:69.01:0,69,801	1/1:4,5:10:21.06:356,21,0	0/0:33,0:36:82.52:0,83,1018	0/0:21,0:21:60.04:0,60,688	0/0:23,0:23:63.14:0,63,747	1/1:4,12:17:35.10:541,35,0	0/0:29,0:29:75.10:0,75,911	1/1:6,18:26:36.10:643,36,0	1/1:5,24:31:63.17:1126,63,0	0/0:32,0:33:76.52:0,77,941	0/0:18,0:18:48.03:0,48,578	1/1:6,9:19:37.25:471,37,0	1/1:4,10:14:30.06:519,30,0	0/0:32,0:32:77.93:0,78,908	0/0:28,0:28:66:0,66,802	1/1:8,9:17:12.51:232,13,0	1/1:2,8:16:36.10:590,36,0	0/0:19,0:20:49.48:0,49,602	0/0:24,0:23:62.99:0,63,736	1/1:1,13:19:42.06:636,42,0	0/0:17,0:17:36.01:0,36,434
chr10	88301949	.	C	CTCTGTCTCTG	8434.15	PASS	AB=0.784;AC=26;AF=0.464;AN=56;BaseQRankSum=-3.811;DP=572;FS=23.957;HRun=0;HaplotypeScore=205.1595;InbreedingCoeff=0.7615;MQ=57.06;MQ0=7;MQRankSum=-5.324;QD=29.08;ReadPosRankSum=-1.831;VQSLOD=2.4859;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:99:0,111,2864	0/0:9,0:9:24.05:0,24,537	0/0:29,0:23:26.90:0,27,617	0/0:26,0:23:38.27:0,38,828	1/1:13,4:17:3.95:49,4,0	0/0:13,0:13:30.57:0,31,629	0/0:12,0:12:21.07:0,21,495	0/1:25,0:22:9.19:704,0,9	1/1:3,16:21:12.04:610,12,0	0/0:22,0:22:51.04:0,51,1180	0/0:10,0:9:11.74:0,12,274	0/0:15,0:15:36.11:0,36,718	1/1:3,18:20:21.07:1069,21,0	0/0:19,0:19:48.14:0,48,988	1/1:23,7:29:27.08:1118,27,0	1/1:34,6:40:43.39:1535,43,0	0/0:29,0:29:78.23:0,78,1913	0/0:13,0:13:15.23:0,15,561	1/1:10,0:9:18.03:231,18,0	1/1:9,1:8:3.01:58,3,0	1/1:36,0:36:18.50:260,18,0	0/0:16,0:16:29.89:0,30,508	1/1:12,0:11:3.01:54,3,0	1/1:13,1:14:15.96:307,16,0	0/0:20,0:20:33.10:0,33,847	0/1:5,13:21:48.31:1215,0,48	1/1:6,14:20:16.54:1073,17,0	1/1:5,8:13:6.02:151,6,0
chr10	88301959	.	GTCTC	G	1100.62	PASS	AB=0.943;AC=16;AF=0.286;AN=56;BaseQRankSum=3.373;DP=580;FS=23.467;HRun=0;HaplotypeScore=191.9601;InbreedingCoeff=0.2008;MQ=55.90;MQ0=9;MQRankSum=-0.530;QD=4.32;ReadPosRankSum=-0.773;VQSLOD=1.2275;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:99:0,120,2887	0/0:9,0:9:24.05:0,24,498	0/0:26,0:18:30.07:0,30,633	0/0:31,0:27:55.85:0,56,1140	1/1:12,2:14:2.31:47,2,0	0/0:13,0:13:31.35:0,31,654	0/0:13,0:13:21.07:0,21,500	0/1:32,1:32:99:261,0,776	0/0:20,0:20:11.56:0,12,88	0/0:22,0:21:63.21:0,63,1344	0/0:10,0:9:18.05:0,18,354	0/0:15,0:15:10.82:0,11,617	0/0:22,0:21:15.92:0,16,117	0/0:19,0:19:49.01:0,49,932	0/1:28,4:31:77.31:120,0,77	0/1:44,0:44:95.07:95,0,133	0/0:30,0:30:90.29:0,90,2025	0/0:14,0:14:12.69:0,13,678	0/1:11,1:12:36.79:37,0,241	1/1:9,0:7:2.84:33,3,0	1/1:31,1:31:16.98:258,17,0	0/0:15,0:15:30.06:0,30,486	0/1:11,2:12:45.34:45,0,75	1/1:13,0:13:7.13:123,7,0	0/0:20,0:20:48.15:0,48,1040	0/1:18,0:18:99:193,0,484	0/1:23,0:23:2.29:2,0,288	0/1:9,0:9:36.80:51,0,37
chr10	88301961	.	C	CTG	2293.52	PASS	AB=0.907;AC=20;AF=0.357;AN=56;BaseQRankSum=6.373;DP=596;FS=19.356;HRun=0;HaplotypeScore=186.2402;InbreedingCoeff=0.3245;MQ=56.02;MQ0=10;MQRankSum=-5.351;QD=7.67;ReadPosRankSum=1.457;VQSLOD=1.9091;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:99:0,120,1809	0/0:9,0:9:23.89:0,24,342	0/0:27,0:18:30.04:0,30,505	0/0:37,0:30:58.63:0,59,871	1/1:13,2:15:3.45:48,3,0	0/0:13,0:13:36.12:0,36,544	0/0:15,0:15:22.86:0,23,332	0/1:33,6:36:99:471,0,623	1/1:20,0:20:11.99:103,12,0	0/0:23,0:22:63.21:0,63,944	0/0:11,0:10:17.72:0,18,251	0/0:16,0:16:41.88:0,42,589	1/1:20,1:20:20.98:180,21,0	0/0:19,0:19:54.07:0,54,752	1/1:30,2:31:3.69:257,4,0	0/1:39,6:45:54.44:341,0,54	0/0:31,0:31:90.29:0,90,1352	0/0:14,0:14:37.23:0,37,487	0/1:12,0:11:78.53:79,0,198	1/1:5,3:6:3.01:58,3,0	0/1:25,7:31:0.18:241,0,0	0/0:15,0:15:30.06:0,30,392	0/1:7,6:12:48.50:48,0,74	1/1:12,2:14:15:179,15,0	0/0:21,0:21:51.12:0,51,729	0/1:19,0:19:99:268,0,300	0/1:22,0:22:99:150,0,107	0/1:7,0:7:36.28:52,0,36
chr10	88301969	.	CTCTG	C	47.97	PASS	AB=0.843;AC=3;AF=0.054;AN=56;BaseQRankSum=4.081;DP=599;FS=10.540;HRun=0;HaplotypeScore=210.9103;InbreedingCoeff=-0.1121;MQ=56.58;MQ0=12;MQRankSum=0.454;QD=1.07;ReadPosRankSum=-2.623;VQSLOD=1.4533;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:52:99:0,135,3191	0/0:8,0:8:8.99:0,9,176	0/0:20,1:13:12.44:0,12,339	0/0:51,0:38:37.46:0,37,910	0/0:14,0:14:3.01:0,3,49	0/0:10,6:16:2.92:0,3,32	0/0:7,8:15:14.98:0,15,127	0/0:39,0:38:79.92:0,80,1973	0/0:20,0:20:12.04:0,12,262	0/0:23,0:22:60.21:0,60,1481	0/0:11,0:10:21.07:0,21,420	0/1:10,5:15:14.97:15,0,40	0/0:19,0:18:24.08:0,24,492	0/1:14,3:17:33.67:34,0,75	0/0:31,0:30:22.67:0,23,438	0/0:44,0:44:40.98:0,41,775	0/0:28,0:28:81.28:0,81,2042	0/1:12,1:13:96.01:96,0,112	0/0:16,0:16:47.86:0,48,787	0/0:11,0:9:1.04:0,1,55	0/0:26,0:25:3.01:0,3,77	0/0:11,0:11:5.80:0,6,39	0/0:9,0:8:6.02:0,6,149	0/0:12,0:12:1.04:0,1,53	0/0:24,0:24:63.16:0,63,1350	0/0:22,0:22:56.07:0,56,1179	0/0:21,0:20:32.76:0,33,673	0/0:7,0:7:8.73:0,9,107
chr10	88301974	.	TC	T	1143.44	PASS	AB=0.652;AC=9;AF=0.161;AN=56;BaseQRankSum=4.986;DP=609;FS=10.892;HRun=1;HaplotypeScore=192.6235;InbreedingCoeff=0.3550;MQ=56.70;MQ0=13;MQRankSum=0.588;QD=10.39;ReadPosRankSum=-4.548;VQSLOD=-0.6490;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:99:0,135,2157	0/0:7,0:7:14.77:0,15,212	0/0:35,0:17:30.01:0,30,544	0/0:62,0:43:50.62:0,51,974	0/0:14,1:14:5.67:0,6,96	1/1:9,6:15:17.62:196,18,0	0/1:10,6:16:2.95:210,0,3	0/0:33,0:32:93.10:0,93,1464	0/1:14,6:20:0.47:0,0,175	0/0:23,0:22:66.22:0,66,1035	0/0:12,0:11:20.15:0,20,334	0/1:6,10:16:11.92:205,0,12	0/0:15,1:15:23.77:0,24,382	1/1:7,10:17:26.07:279,26,0	0/0:36,0:34:22.29:0,22,356	0/0:35,6:41:43.42:0,43,641	0/0:29,0:29:87.30:0,87,1387	0/1:6,9:15:49.67:288,0,50	0/0:17,0:17:51.17:0,51,797	0/0:10,0:8:6.49:0,6,97	0/0:22,0:21:3.52:0,4,49	0/1:1,10:11:10:109,0,10	0/0:9,0:8:6.49:0,6,96	0/0:7,4:11:2.96:0,3,48	0/0:23,0:23:63.68:0,64,987	0/0:21,0:21:57.19:0,57,882	0/0:17,4:20:18.48:0,18,508	0/0:6,0:6:9.03:0,9,116
chr10	88301985	.	C	CTG	186.01	PASS	AB=0.981;AC=9;AF=0.161;AN=56;BaseQRankSum=6.299;DP=654;FS=2.858;HRun=0;HaplotypeScore=226.3234;InbreedingCoeff=-0.0935;MQ=71.24;MQ0=11;MQRankSum=-5.697;QD=1.06;ReadPosRankSum=-2.414;VQSLOD=2.5440;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:52:99:0,136,2022	0/0:6,0:6:14.86:0,15,185	0/0:55,0:31:66.18:0,66,794	0/0:84,0:59:94.17:0,94,1176	0/0:17,0:16:5.39:0,5,91	0/1:17,0:16:10.40:10,0,184	0/0:16,0:16:19.32:0,19,211	0/0:36,0:35:77.96:0,78,1335	0/1:19,0:19:42.68:43,0,56	0/0:24,0:23:66.16:0,66,943	0/0:13,0:13:17.40:0,17,274	0/0:16,0:16:11.60:0,12,115	0/0:16,0:15:15.83:0,16,128	0/0:16,0:16:16.83:0,17,186	0/1:33,2:33:7.13:7,0,52	0/1:33,3:36:99:130,0,360	0/0:29,0:29:84.25:0,84,1241	0/1:17,0:17:31.45:31,0,206	0/0:20,0:20:57.05:0,57,723	0/0:14,0:12:7.37:0,7,135	0/0:18,2:19:2.39:0,2,45	0/0:7,0:7:2.68:0,3,46	0/0:9,1:9:5.81:0,6,91	1/1:10,0:10:1.55:5,2,0	0/0:19,0:19:50.96:0,51,779	0/1:21,0:21:35.56:36,0,749	0/1:21,0:20:50.61:51,0,292	0/0:7,0:7:3.01:0,3,45
chr10	88301987	.	C	CTG	276.50	PASS	AB=0.844;AC=6;AF=0.107;AN=56;BaseQRankSum=5.473;DP=652;FS=3.813;HRun=0;HaplotypeScore=220.1372;InbreedingCoeff=-0.1615;MQ=72.02;MQ0=12;MQRankSum=-1.327;QD=2.27;ReadPosRankSum=-3.404;VQSLOD=1.9675;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:51:99:0,135,2019	0/0:7,0:7:14.86:0,15,187	0/0:57,0:32:68.35:0,68,777	0/0:88,0:61:56.68:0,57,1095	0/0:14,1:14:5.39:0,5,91	0/1:15,2:16:63.40:63,0,163	0/1:17,0:17:70.88:71,0,120	0/0:35,0:34:99:0,100,1374	0/1:15,5:20:12.02:12,0,113	0/0:24,0:23:60.20:0,60,900	0/0:12,0:12:17.40:0,17,274	0/0:13,3:17:11.28:0,11,113	0/0:15,1:15:23.87:0,24,319	0/1:10,7:17:3.90:4,0,176	0/0:32,0:30:19.37:0,19,245	0/1:28,6:34:20.20:20,0,427	0/0:29,0:29:84.25:0,84,1242	0/1:13,4:17:99:222,0,163	0/0:18,0:18:47.95:0,48,668	0/0:14,0:12:8.16:0,8,137	0/0:21,0:20:2.34:0,2,45	0/0:5,1:6:2.71:0,3,46	0/0:8,0:7:5.81:0,6,91	0/0:4,5:9:2.47:0,2,28	0/0:19,0:19:50.96:0,51,778	0/0:20,0:20:38.47:0,38,822	0/0:18,4:21:13.12:0,13,402	0/0:7,0:7:3.01:0,3,46
chr10	88301998	.	TTGTCA	T	514.51	PASS	AB=0.873;AC=8;AF=0.143;AN=56;BaseQRankSum=7.016;DP=674;FS=0.707;HRun=0;HaplotypeScore=235.9421;InbreedingCoeff=-0.1084;MQ=79.51;MQ0=8;MQRankSum=-5.104;QD=3.03;ReadPosRankSum=-4.041;VQSLOD=1.9586;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:47:99:0,129,3927	0/0:7,0:7:18.05:0,18,480	0/0:81,0:48:99:0,100,2628	0/0:122,0:82:99:0,113,3119	0/0:12,2:14:5.85:0,6,91	0/1:14,0:13:45.60:46,0,266	0/0:21,0:21:38.76:0,39,732	0/1:29,4:32:99:267,0,1142	0/0:11,5:17:12.95:0,13,96	0/0:22,0:22:63.22:0,63,1921	0/0:11,0:11:21.07:0,21,648	0/1:16,0:16:0.90:1,0,294	0/0:13,1:13:4.70:0,5,70	0/0:13,0:13:17.32:0,17,378	0/1:20,8:29:12.26:12,0,44	0/1:23,6:30:25.67:26,0,152	0/0:31,0:31:90.26:0,90,2748	0/1:14,0:14:35.99:36,0,451	0/0:12,0:11:4.84:0,5,318	0/0:10,0:10:8.18:0,8,213	0/0:13,1:15:2.57:0,3,74	0/0:7,0:7:11.99:0,12,215	0/0:4,1:7:5.95:0,6,85	0/1:4,4:8:0.18:1,0,0	0/0:20,0:20:54.03:0,54,1197	0/0:23,0:23:69.15:0,69,1425	0/1:17,6:23:99:246,0,508	0/0:4,0:4:5.99:0,6,96
chr10	88302018	.	C	CTG	627.94	PASS	AB=0.867;AC=8;AF=0.143;AN=56;BaseQRankSum=7.143;DP=756;FS=4.673;HRun=0;HaplotypeScore=215.6928;InbreedingCoeff=0.1901;MQ=72.30;MQ0=17;MQRankSum=-4.601;QD=5.02;ReadPosRankSum=-3.707;VQSLOD=2.5692;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,120,1833	0/0:8,0:8:20.90:0,21,320	0/0:122,0:64:99:0,147,1895	0/0:149,1:75:83.46:0,83,1597	0/1:11,1:11:1.61:2,0,39	0/0:14,0:13:14.84:0,15,229	0/0:25,0:25:44.40:0,44,687	0/0:26,0:21:22.59:0,23,571	0/0:19,2:19:4.05:0,4,52	0/0:24,0:24:69.23:0,69,1046	0/0:11,0:11:20.40:0,20,320	0/0:17,0:17:20.73:0,21,321	1/1:11,3:12:8.75:87,9,0	0/0:13,0:13:23.87:0,24,367	0/1:18,10:26:11.26:12,0,11	0/1:26,4:30:36.64:97,0,37	0/0:36,0:36:99:0,99,1465	0/0:18,0:18:36.07:0,36,489	0/1:11,0:10:99:265,0,109	0/0:9,1:10:6.47:0,6,92	0/0:17,0:15:2.42:0,2,31	0/0:12,0:12:27.09:0,27,386	0/0:6,3:9:0.26:0,0,1	0/1:7,2:9:0:1,0,0	0/0:22,0:22:47.74:0,48,701	0/0:24,0:23:67.76:0,68,669	0/1:17,4:20:99:286,0,198	0/0:4,0:4:2.72:0,3,29
chr10	88302031	.	T	TCACACA	703.61	PASS	AB=0.947;AC=16;AF=0.296;AN=54;BaseQRankSum=5.011;DP=755;FS=25.311;HRun=0;HaplotypeScore=245.0065;InbreedingCoeff=0.2569;MQ=60.38;MQ0=23;MQRankSum=-2.522;QD=3.42;ReadPosRankSum=-2.845;VQSLOD=0.3176;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,1828	0/0:9,0:9:23.99:0,24,449	0/0:105,0:38:96.21:0,96,1291	0/0:132,0:49:75.55:0,76,1271	0/1:10,0:11:0.33:1,0,0	0/1:15,0:15:55.94:56,0,115	0/0:30,0:30:55.57:0,56,792	0/0:26,0:21:20.75:0,21,414	0/0:22,0:20:0.85:0,1,2	0/0:26,0:25:63.20:0,63,1206	0/0:12,0:12:20.97:0,21,278	0/0:21,0:21:30.08:0,30,647	1/1:13,0:11:6.02:172,6,0	0/0:15,0:15:27.08:0,27,566	0/1:23,3:25:0.01:0,0,1	0/1:30,1:31:23.76:197,0,24	0/0:40,0:40:91.03:0,91,2157	0/0:20,0:20:20.42:0,20,201	0/1:12,0:13:7.25:7,0,74	1/1:11,0:11:5.02:132,5,0	0/0:19,0:16:3.01:0,3,45	0/0:19,0:19:36.10:0,36,680	1/1:9,0:10:2.53:16,3,0	./.	0/1:24,0:23:12.91:13,0,328	0/1:28,0:27:67.96:68,0,491	0/1:19,1:19:37.77:148,0,38	1/1:2,0:2:3.01:41,3,0
chr10	88302032	.	C	CTGTCTGTCTGTCTG	3541.47	PASS	AB=0.899;AC=16;AF=0.286;AN=56;BaseQRankSum=2.503;DP=763;FS=2.630;HRun=0;HaplotypeScore=301.2425;InbreedingCoeff=0.4994;MQ=59.61;MQ0=23;MQRankSum=-6.397;QD=17.62;ReadPosRankSum=-3.612;VQSLOD=1.6896;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,116,3923	0/0:9,0:9:17.97:0,18,590	0/0:104,0:37:98.41:0,98,2610	0/0:132,0:49:66.57:0,67,2390	1/1:12,0:11:1.41:3,1,0	0/0:15,0:15:20.62:0,21,548	0/0:30,0:30:50.91:0,51,1860	0/1:26,0:21:99:318,0,213	0/1:18,0:18:3.80:4,0,12	0/0:25,0:24:66.22:0,66,2250	0/0:12,0:12:20.02:0,20,769	0/0:21,0:21:28.84:0,29,981	1/1:14,0:12:6.29:113,6,0	0/0:15,0:15:24.34:0,24,1038	1/1:22,0:24:5.18:7,5,0	0/1:27,4:31:5.40:278,0,5	0/0:41,0:41:99:0,117,3988	0/0:21,0:21:39.13:0,39,1096	1/1:3,6:16:48.14:1466,48,0	0/0:11,0:11:2.80:0,3,8	0/0:18,0:18:2.61:0,3,44	0/0:20,0:20:29.69:0,30,1137	0/0:11,0:11:1.82:0,2,13	1/1:8,0:8:1.89:3,2,0	0/0:26,0:25:21.49:0,21,694	0/1:21,0:27:1.38:1,0,603	1/1:17,1:19:12.73:1348,13,0	0/0:1,0:2:2.60:0,3,10
chr10	88302033	.	T	TCACA	2655.82	PASS	AB=0.980;AC=35;AF=0.648;AN=54;BaseQRankSum=5.017;DP=739;FS=2.055;HRun=0;HaplotypeScore=205.0408;InbreedingCoeff=0.6170;MQ=59.56;MQ0=25;MQRankSum=-3.265;QD=5.35;ReadPosRankSum=-1.499;VQSLOD=2.6520;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:45:2.46:2,0,513	0/0:7,0:9:15.02:0,15,172	./.	0/1:130,0:47:0:0,0,0	0/1:8,0:9:0.16:0,0,0	1/1:15,0:16:23.13:266,23,0	1/1:24,1:30:28.42:211,28,0	1/1:27,0:22:7.34:64,7,0	1/1:20,0:18:1.32:21,1,0	0/0:23,0:24:36.04:0,36,457	0/1:12,0:12:0:0,0,1	0/0:21,0:21:27.08:0,27,398	1/1:10,0:10:14:151,14,0	0/0:16,0:16:2.92:0,3,263	1/1:22,0:20:1.90:6,2,0	1/1:22,1:26:24.04:385,24,0	0/0:40,0:42:27.78:0,28,952	1/1:10,10:25:24.70:487,25,0	1/1:14,0:13:6.01:73,6,0	1/1:8,0:7:9.02:161,9,0	0/1:20,0:17:0:0,0,0	0/0:20,0:20:23.60:0,24,396	1/1:8,1:10:3.28:69,3,0	0/0:8,0:8:0.47:0,0,1	1/1:18,7:26:6.02:124,6,0	1/1:26,0:27:17.01:478,17,0	1/1:12,0:13:20.02:268,20,0	1/1:1,0:1:3.01:51,3,0
chr10	88302273	.	T	TTAGGCACCCCAC	1030.92	PASS	AB=0.700;AC=25;AF=0.962;AN=26;BaseQRankSum=-2.341;DP=35;FS=3.067;HRun=0;HaplotypeScore=18.1463;InbreedingCoeff=-0.1949;MQ=126.17;MQ0=2;MQRankSum=-2.113;QD=34.36;ReadPosRankSum=-0.171;VQSLOD=2.0597;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:1:3.01:50,3,0	./.	1/1:0,0:1:3.01:90,3,0	0/1:4,1:7:15.42:278,0,15	./.	./.	./.	1/1:3,0:3:6:52,6,0	./.	./.	1/1:0,0:1:2.97:20,3,0	./.	1/1:2,0:2:2.97:20,3,0	1/1:0,0:1:3.01:134,3,0	1/1:2,0:4:9:172,9,0	./.	1/1:2,0:2:3.01:44,3,0	./.	./.	./.	1/1:3,0:3:8.96:69,9,0	./.	./.	1/1:1,0:1:2.97:20,3,0	./.	1/1:1,0:1:3.01:87,3,0	1/1:2,0:2:3.01:76,3,0	./.
chr10	88302441	.	C	CCAAT	1880.83	PASS	AC=24;AF=0.571;AN=42;BaseQRankSum=6.729;DP=171;FS=4.991;HRun=0;HaplotypeScore=32.5885;InbreedingCoeff=0.7106;MQ=71.79;MQ0=0;MQRankSum=-6.844;QD=25.08;ReadPosRankSum=2.851;VQSLOD=2.7341;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:33.11:0,33,647	0/0:1,0:1:3.01:0,3,60	0/0:16,0:16:44.80:0,45,827	0/0:12,0:9:21.07:0,21,419	0/0:2,4:5:2.22:0,2,7	./.	1/1:0,1:1:3.01:82,3,0	./.	1/1:1,7:7:6.02:125,6,0	0/0:10,0:9:27.09:0,27,536	0/0:8,0:8:21.07:0,21,419	1/1:0,8:7:9.03:247,9,0	1/1:0,9:7:5.52:165,6,0	1/1:0,7:7:6.02:165,6,0	1/1:0,6:6:3.01:82,3,0	./.	0/0:7,0:7:18.02:0,18,319	./.	1/1:1,1:1:3.01:62,3,0	1/1:0,8:8:6.02:133,6,0	./.	1/1:2,5:7:9.03:158,9,0	./.	./.	0/0:12,0:12:33.03:0,33,578	1/1:0,5:5:12.04:330,12,0	1/1:1,7:6:9.03:247,9,0	1/1:0,5:4:9.03:248,9,0
chr10	88302980	.	AT	A	13143.73	PASS	AB=0.532;AC=27;AF=0.482;AN=56;BaseQRankSum=11.244;DP=669;FS=3.226;HRun=1;HaplotypeScore=70.2638;InbreedingCoeff=0.9271;MQ=87.53;MQ0=0;MQRankSum=-0.452;QD=37.99;ReadPosRankSum=2.185;VQSLOD=5.6290;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.25:0,84,1314	0/0:8,0:8:24.08:0,24,381	0/0:23,0:23:69.11:0,69,1042	0/0:25,0:25:61.75:0,62,916	1/1:0,30:30:87.22:1192,87,0	0/0:20,0:20:60.19:0,60,935	0/0:25,0:25:72.21:0,72,1099	1/1:0,34:34:99:1340,102,0	1/1:0,26:26:60.20:837,60,0	0/0:25,0:25:72.21:0,72,1107	0/0:23,0:23:69.22:0,69,1074	0/0:26,0:26:75.21:0,75,1129	1/1:0,22:22:60.20:839,60,0	0/0:22,0:22:66.22:0,66,1051	1/1:0,34:34:99:1384,99,0	1/1:0,21:21:57.19:797,57,0	0/0:30,0:30:90.29:0,90,1413	0/0:23,0:23:69.24:0,69,1097	1/1:0,25:25:75.25:1047,75,0	1/1:0,28:28:81.27:1126,81,0	1/1:0,20:20:54.18:754,54,0	0/0:23,0:23:69.24:0,69,1102	1/1:0,17:17:39.13:546,39,0	1/1:0,19:19:54.18:755,54,0	0/0:21,0:21:57.18:0,57,882	0/1:4,29:33:92.56:1059,0,93	1/1:0,30:30:87.29:1215,87,0	1/1:0,7:7:18.06:251,18,0
chr10	88304727	.	AGTT	A	437.18	PASS	AB=1.000;AC=17;AF=0.370;AN=46;BaseQRankSum=3.519;DP=362;FS=7.818;HRun=0;HaplotypeScore=65.2854;InbreedingCoeff=0.6836;MQ=113.09;MQ0=0;MQRankSum=-1.269;QD=27.32;ReadPosRankSum=-5.302;VQSLOD=1.4701;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,3233	0/0:14,0:14:42.14:0,42,1019	0/0:25,0:25:69.20:0,69,1544	0/0:30,0:30:89.74:0,90,1861	1/1:2,1:3:6:58,6,0	0/0:13,0:13:39.13:0,39,945	0/0:16,0:16:48.12:0,48,1129	./.	1/1:1,0:1:3:28,3,0	0/0:29,0:29:84.28:0,84,2019	0/0:27,0:27:75.26:0,75,1836	0/0:22,0:22:66.23:0,66,1585	1/1:1,0:1:3.01:55,3,0	0/0:22,0:22:66.23:0,66,1614	1/1:2,0:1:3.01:55,3,0	1/1:2,0:2:6.02:109,6,0	0/0:44,0:44:99:0,132,3246	0/0:20,0:20:60.21:0,60,1471	1/1:0,3:3:9.03:152,9,0	1/1:1,0:1:3.01:34,3,0	1/1:1,0:1:3.01:55,3,0	0/0:19,0:19:57.20:0,57,1397	./.	./.	0/0:18,0:18:54.19:0,54,1329	0/1:2,0:2:49.44:49,0,68	./.	./.
chr10	88304728	.	GT	G	279.48	PASS	AB=0.667;AC=19;AF=0.396;AN=48;BaseQRankSum=5.982;DP=372;FS=6.540;HRun=3;HaplotypeScore=48.4368;InbreedingCoeff=0.7110;MQ=112.72;MQ0=0;MQRankSum=-2.443;QD=13.31;ReadPosRankSum=-6.205;VQSLOD=-0.0339;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,129,1837	0/0:14,0:14:42.13:0,42,588	0/0:26,0:26:63.13:0,63,831	0/0:30,0:30:81.22:0,81,1079	1/1:1,2:3:5.87:40,6,0	0/0:13,0:13:36.10:0,36,499	0/0:16,0:16:48.15:0,48,672	1/1:3,0:3:8.98:73,9,0	1/1:0,1:1:2.98:22,3,0	0/0:29,0:29:81.27:0,81,1150	0/0:27,0:27:75.25:0,75,1077	0/0:22,0:22:60.20:0,60,864	1/1:0,1:1:3.01:30,3,0	0/0:23,0:23:69.22:0,69,975	1/1:0,2:1:3.01:30,3,0	1/1:2,0:2:6.01:60,6,0	0/0:46,0:46:99:0,138,1949	0/0:20,0:20:60.18:0,60,840	1/1:3,0:3:8.99:82,9,0	1/1:0,1:1:3.01:35,3,0	1/1:3,0:3:6:54,6,0	0/0:20,0:20:60.19:0,60,842	./.	./.	0/0:18,0:18:54.15:0,54,740	0/1:1,1:2:21.49:21,0,37	./.	./.
chr10	88304996	.	A	AG	13869.36	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-5.216;DP=677;FS=0.285;HRun=1;HaplotypeScore=69.4361;InbreedingCoeff=0.9846;MQ=80.15;MQ0=0;MQRankSum=-2.106;QD=39.97;ReadPosRankSum=1.112;VQSLOD=5.4252;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1697	0/0:13,0:13:39.11:0,39,491	0/0:15,0:15:37.81:0,38,463	0/0:19,0:19:50.37:0,50,549	1/1:1,30:31:87.29:1276,87,0	0/0:27,0:27:78.25:0,78,1012	0/0:30,0:30:87.26:0,87,1101	1/1:0,17:17:51.16:743,51,0	1/1:0,31:31:81.27:1214,81,0	0/0:21,0:21:60.19:0,60,768	0/0:20,0:20:57.17:0,57,726	0/0:23,0:23:66.21:0,66,856	1/1:0,23:23:66.22:988,66,0	0/0:28,0:28:81.19:0,81,1014	1/1:0,29:28:75.25:1124,75,0	1/1:2,33:35:93.32:1394,93,0	0/0:30,0:30:90.22:0,90,1133	0/0:16,0:16:48.11:0,48,590	1/1:1,22:23:66.22:977,66,0	1/1:0,28:28:81.23:1174,81,0	1/1:0,24:24:66.22:989,66,0	0/0:21,0:21:63.19:0,63,803	1/1:0,18:18:51.17:763,51,0	1/1:2,37:39:99:1483,99,0	0/0:22,0:22:66.21:0,66,857	1/1:4,19:23:18.23:767,18,0	1/1:0,23:23:60.20:889,60,0	1/1:0,3:3:6.02:90,6,0
chr10	88305551	.	TG	T	800.64	PASS	AC=18;AF=0.375;AN=48;BaseQRankSum=1.424;DP=227;FS=4.598;HRun=9;HaplotypeScore=39.3433;InbreedingCoeff=0.7344;MQ=69.21;MQ0=0;MQRankSum=-0.873;QD=11.28;ReadPosRankSum=0.215;VQSLOD=1.8835;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:15.04:0,15,172	./.	0/0:11,0:11:9.03:0,9,102	0/0:5,0:5:8.97:0,9,77	0/0:18,0:18:8.94:0,9,74	./.	1/1:0,10:10:9:82,9,0	1/1:2,6:8:18.01:165,18,0	0/0:10,0:10:9.01:0,9,93	0/0:3,0:3:9.03:0,9,103	./.	./.	0/0:13,0:13:15:0,15,155	1/1:0,10:10:24:215,24,0	0/0:14,0:14:5.98:0,6,54	0/0:10,0:10:6.02:0,6,67	0/0:7,0:7:8.97:0,9,88	1/1:4,3:7:1.97:26,2,0	0/0:8,0:8:18.05:0,18,205	0/0:6,0:6:3.01:0,3,34	1/1:2,7:9:12:109,12,0	1/1:1,5:6:2.28:26,2,0	0/0:7,0:7:9.01:0,9,93	0/0:11,0:11:12.03:0,12,132	1/1:1,5:6:3:27,3,0	1/1:3,8:11:23.99:213,24,0	0/0:15,0:15:20.99:0,21,214	1/1:0,4:4:12.01:110,12,0
chr10	88306130	.	TAGA	T	1649.65	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.016;DP=323;FS=0.702;HRun=0;HaplotypeScore=55.0584;InbreedingCoeff=0.8920;MQ=83.27;MQ0=4;MQRankSum=-5.171;QD=41.24;ReadPosRankSum=-0.655;VQSLOD=3.9555;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:12.04:0,12,230	0/0:4,0:4:12.04:0,12,264	0/0:37,0:25:54.64:0,55,1102	0/0:62,0:27:43.02:0,43,853	0/0:8,0:8:21.07:0,21,457	0/0:10,0:10:30.06:0,30,615	0/0:3,0:3:9.03:0,9,199	1/1:0,16:16:48.16:771,48,0	0/0:3,0:3:9.03:0,9,199	0/0:4,0:4:12.04:0,12,265	0/0:3,0:3:6.02:0,6,132	0/0:11,0:11:30.10:0,30,656	0/0:14,0:14:42.14:0,42,926	0/0:9,0:9:27.09:0,27,595	0/0:13,0:13:39.13:0,39,849	0/0:14,0:14:42.14:0,42,926	0/0:7,0:7:18.06:0,18,397	0/0:5,0:5:15.05:0,15,331	0/0:13,0:13:36.12:0,36,773	0/0:14,0:14:39.13:0,39,861	1/1:0,10:10:27.09:433,27,0	0/0:8,0:8:24.08:0,24,518	0/0:12,0:12:33.08:0,33,682	0/0:7,0:7:21.07:0,21,463	0/0:4,0:4:12.04:0,12,265	1/1:0,9:9:27.07:410,27,0	0/0:12,0:12:36.12:0,36,792	1/1:0,5:5:12.04:192,12,0
chr10	88306661	.	TGGAGAGAGAG	T	2689.08	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=2.693;DP=498;FS=16.845;HRun=0;HaplotypeScore=128.4218;InbreedingCoeff=0.3946;MQ=70.96;MQ0=8;MQRankSum=-2.978;QD=8.43;ReadPosRankSum=0.131;VQSLOD=1.3267;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:44.87:0,45,500	0/0:5,0:5:14.99:0,15,127	0/0:22,0:16:41.03:0,41,403	0/0:31,0:18:36.47:0,36,364	1/1:22,0:22:19.04:404,19,0	0/1:24,0:23:9.38:9,0,295	0/1:21,0:21:4.58:5,0,293	0/0:21,0:21:59.48:0,59,547	1/1:7,0:7:20.99:289,21,0	0/0:18,0:17:21.62:0,22,406	0/1:12,0:12:18.96:19,0,376	0/1:21,0:21:6.53:7,0,313	1/1:0,14:15:5.47:113,5,0	0/1:20,0:20:12.04:12,0,252	1/1:1,18:18:3.01:102,3,0	1/1:0,15:17:15.52:456,16,0	0/0:17,0:17:50.71:0,51,470	0/1:18,0:18:55.01:55,0,232	1/1:23,0:22:65.82:553,66,0	1/1:0,25:25:8.89:138,9,0	0/0:24,0:24:66.04:0,66,1406	0/1:16,0:16:14:14,0,265	1/1:9,0:9:20.99:202,21,0	1/1:0,23:23:3.01:102,3,0	0/1:18,0:18:99:100,0,214	0/0:15,0:14:41.92:0,42,581	1/1:9,0:9:26.92:306,27,0	0/0:9,0:9:26.99:0,27,380
chr10	88306662	.	GGAGAGAGAGAGAGA	G	914.47	PASS	AB=0.929;AC=25;AF=0.500;AN=50;BaseQRankSum=6.120;DP=491;FS=67.455;HRun=0;HaplotypeScore=161.1894;InbreedingCoeff=0.5663;MQ=69.90;MQ0=9;MQRankSum=-4.844;QD=3.75;ReadPosRankSum=-1.348;VQSLOD=0.1166;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:18.03:0,18,443	./.	./.	./.	0/0:21,0:21:12:0,12,313	1/1:17,7:23:6.02:135,6,0	1/1:15,5:20:2.96:116,3,0	0/0:22,0:22:18.88:0,19,416	0/0:7,0:7:8.97:0,9,84	0/0:18,0:17:15.04:0,15,322	0/1:12,1:13:99:104,0,288	1/1:15,5:20:2.95:116,3,0	1/1:15,0:15:2.74:12,3,0	1/1:14,4:19:5.98:118,6,0	1/1:19,0:18:2.84:14,3,0	1/1:17,0:17:9.91:133,10,0	0/0:17,0:17:12.01:0,12,281	1/1:12,1:17:6.02:174,6,0	0/0:21,0:20:6.02:0,6,133	1/1:25,0:25:2.84:14,3,0	0/0:24,0:23:33.11:0,33,1562	1/1:11,0:14:3.01:98,3,0	0/0:9,0:9:3.01:0,3,42	1/1:24,0:24:2.84:14,3,0	1/1:10,0:17:5.87:35,6,0	0/0:16,0:15:12.03:0,12,432	0/0:8,0:8:11.29:0,11,194	0/0:10,0:10:6.49:0,6,273
chr10	88308735	.	GT	G	3471.45	PASS	AB=0.802;AC=21;AF=0.375;AN=56;BaseQRankSum=11.426;DP=569;FS=2.560;HRun=12;HaplotypeScore=58.0576;InbreedingCoeff=0.7094;MQ=73.14;MQ0=1;MQRankSum=-0.858;QD=12.62;ReadPosRankSum=4.043;VQSLOD=3.7175;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:51.09:0,51,511	0/0:3,0:3:6.01:0,6,61	0/1:17,2:16:24.31:24,0,160	0/0:3,0:2:2.99:0,3,23	1/1:3,20:23:22.20:322,22,0	0/0:22,2:25:30.71:0,31,478	0/0:13,0:13:33.05:0,33,324	0/0:24,1:25:33.75:0,34,482	1/1:5,14:19:5.97:226,6,0	0/1:23,3:27:12.74:13,0,397	0/0:26,0:26:55.88:0,56,526	0/0:19,0:19:51.05:0,51,484	1/1:7,13:21:42.90:313,43,0	0/0:21,2:23:10.59:0,11,439	1/1:3,19:23:28.38:393,28,0	1/1:5,19:24:47.77:371,48,0	0/0:19,0:19:42.01:0,42,403	0/0:25,1:28:48.52:0,49,622	1/1:5,12:19:12.47:260,12,0	0/1:9,18:28:30.62:298,0,31	0/0:13,0:13:27.05:0,27,274	0/0:12,0:12:24.04:0,24,238	1/1:1,11:12:23.90:186,24,0	1/1:4,15:21:51.89:383,52,0	0/0:23,1:25:34.95:0,35,507	0/0:28,1:29:36.85:0,37,538	1/1:6,30:38:73.63:682,74,0	0/0:8,0:9:26.89:0,27,258
chr10	88309341	.	CCTT	C	2606.75	PASS	AB=0.850;AC=25;AF=0.463;AN=54;BaseQRankSum=9.893;DP=537;FS=21.824;HRun=0;HaplotypeScore=104.0072;InbreedingCoeff=0.8696;MQ=90.62;MQ0=0;MQRankSum=-5.922;QD=16.39;ReadPosRankSum=-10.860;VQSLOD=-0.6502;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,2968	0/0:13,0:13:39.13:0,39,799	0/0:35,0:35:97.02:0,97,1798	0/0:20,0:18:45.13:0,45,850	1/1:11,0:11:9.97:134,10,0	0/0:23,0:23:66.23:0,66,1366	0/0:25,0:25:69.18:0,69,1423	1/1:17,2:19:26.87:304,27,0	1/1:9,1:10:18.49:212,18,0	0/0:35,0:35:99:0,105,2199	0/0:24,0:24:72.23:0,72,1494	0/0:26,0:26:75.25:0,75,1596	1/1:19,0:19:29.99:351,30,0	0/0:31,0:31:90.30:0,90,1940	1/1:12,0:12:24.03:293,24,0	1/1:11,0:11:21.07:285,21,0	0/0:25,0:25:75.26:0,75,1588	0/0:20,0:20:54.17:0,54,1137	1/1:14,0:14:17.63:248,18,0	1/1:7,0:7:15.43:157,15,0	1/1:12,1:13:17.72:206,18,0	0/0:24,0:24:72.25:0,72,1513	1/1:3,0:3:0.47:1,0,0	1/1:13,0:13:6.02:77,6,0	0/0:28,0:28:84.28:0,84,1752	0/1:14,3:17:88.27:376,0,88	1/1:9,1:10:15.83:175,16,0	./.
chr10	88309998	.	GA	G	5015.26	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=11.551;DP=626;FS=4.543;HRun=9;HaplotypeScore=76.4066;InbreedingCoeff=0.9883;MQ=68.78;MQ0=1;MQRankSum=-1.550;QD=19.82;ReadPosRankSum=1.549;VQSLOD=5.4375;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.19:0,78,885	0/0:8,0:8:21.06:0,21,242	0/0:23,1:15:29.61:0,30,258	0/0:15,0:11:9.09:0,9,171	1/1:2,34:36:96.05:876,96,0	0/0:29,0:29:81.23:0,81,926	0/0:17,0:17:45.13:0,45,518	0/0:25,0:25:66.18:0,66,745	1/1:1,13:14:39.01:356,39,0	0/0:23,0:23:57.16:0,57,649	0/0:20,0:20:54.16:0,54,623	0/0:16,0:16:48.14:0,48,554	1/1:5,24:29:51.02:467,51,0	0/0:29,0:29:72.15:0,72,798	1/1:0,17:17:42.02:384,42,0	1/1:4,17:21:30.01:275,30,0	0/0:19,0:19:48.14:0,48,553	0/0:16,0:16:45.13:0,45,518	1/1:2,14:16:42.02:384,42,0	1/1:5,30:35:84.02:768,84,0	0/0:20,0:20:42.10:0,42,469	0/0:27,0:27:69.18:0,69,777	1/1:4,21:25:48.02:437,48,0	1/1:1,30:31:63.03:576,63,0	0/0:3,0:25:54.18:0,54,295	0/0:24,0:24:60.18:0,60,691	1/1:5,24:29:54.01:494,54,0	0/0:7,0:7:15.04:0,15,173
chr10	88310145	.	T	TG	6100.71	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=18.835;DP=555;FS=0.657;HRun=1;HaplotypeScore=147.6916;InbreedingCoeff=0.9885;MQ=90.62;MQ0=0;MQRankSum=-17.857;QD=27.24;ReadPosRankSum=0.778;VQSLOD=4.6554;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,1869	0/0:6,0:6:18.05:0,18,234	0/0:25,0:25:74.77:0,75,943	0/0:27,0:27:76.76:0,77,970	1/1:2,18:20:57.06:554,57,0	0/0:25,0:25:69.21:0,69,918	0/0:12,0:12:36.12:0,36,504	1/1:0,15:18:54.13:592,54,0	1/1:1,16:17:51.05:474,51,0	0/0:29,0:29:87.29:0,87,1204	0/0:23,0:23:69.23:0,69,963	0/0:23,0:23:69.20:0,69,926	1/1:1,24:24:71.92:670,72,0	0/0:24,0:24:72.23:0,72,988	1/1:0,18:17:51.05:473,51,0	1/1:2,22:23:68.89:624,69,0	0/0:18,0:18:54.17:0,54,738	0/0:21,0:21:59.56:0,60,805	1/1:1,4:5:14.96:136,15,0	1/1:0,17:17:48.06:449,48,0	1/1:4,8:12:33.05:353,33,0	0/0:24,0:24:69.22:0,69,945	1/1:1,15:16:48.05:455,48,0	1/1:1,15:16:33.49:298,33,0	0/0:29,0:29:87.27:0,87,1195	1/1:0,15:18:51.08:513,51,0	1/1:0,15:15:45.07:437,45,0	1/1:1,2:3:8.91:72,9,0
chr10	88310146	.	T	TGTGG	8034.63	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=19.082;DP=551;FS=0.660;HRun=0;HaplotypeScore=171.6570;InbreedingCoeff=0.9886;MQ=91.41;MQ0=0;MQRankSum=-18.275;QD=35.87;ReadPosRankSum=1.092;VQSLOD=4.9552;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,2796	0/0:6,0:6:18.06:0,18,362	0/0:26,0:26:72.20:0,72,1385	0/0:27,0:27:77.25:0,77,1491	1/1:2,18:20:52.70:672,53,0	0/0:23,0:23:69.21:0,69,1354	0/0:12,0:12:36.12:0,36,755	1/1:3,15:18:52.75:775,53,0	1/1:1,16:17:51.16:661,51,0	0/0:28,0:28:84.29:0,84,1762	0/0:23,0:23:69.24:0,69,1444	0/0:22,0:22:66.23:0,66,1365	1/1:2,23:24:72.11:865,72,0	0/0:24,0:24:72.25:0,72,1499	1/1:0,18:17:51.16:626,51,0	1/1:2,22:23:69.22:891,69,0	0/0:17,0:17:51.18:0,51,1070	0/0:21,0:21:62.92:0,63,1229	1/1:1,4:5:15.03:203,15,0	1/1:2,15:17:48.15:647,48,0	1/1:4,8:12:29.30:373,29,0	0/0:24,0:24:69.24:0,69,1420	1/1:1,15:16:48.13:607,48,0	1/1:1,15:16:33.98:374,34,0	0/0:29,0:29:87.30:0,87,1808	1/1:3,15:18:47.36:654,47,0	1/1:0,15:15:45.13:601,45,0	1/1:1,2:3:8.97:88,9,0
chr10	88310147	.	CCAA	C	5340.22	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=19.180;DP=555;FS=1.419;HRun=0;HaplotypeScore=168.9955;InbreedingCoeff=0.9892;MQ=92.98;MQ0=0;MQRankSum=-18.669;QD=24.16;ReadPosRankSum=2.205;VQSLOD=4.6203;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,3247	0/0:6,0:6:18.06:0,18,438	0/0:28,0:28:78.27:0,78,1718	0/0:28,0:28:83.50:0,83,1974	1/1:0,18:18:50.57:365,51,0	0/0:24,0:24:72.20:0,72,1685	0/0:12,0:12:36.12:0,36,887	1/1:3,15:18:45.14:534,45,0	1/1:1,16:17:49.57:440,50,0	0/0:29,0:29:87.30:0,87,2108	0/0:23,0:23:69.24:0,69,1677	0/0:22,0:22:66.23:0,66,1602	1/1:2,23:24:71.04:619,71,0	0/0:25,0:25:75.26:0,75,1835	1/1:0,18:17:50.99:443,51,0	1/1:2,22:23:69.05:634,69,0	0/0:18,0:18:54.19:0,54,1318	0/0:21,0:21:63.22:0,63,1544	1/1:2,4:6:18.04:191,18,0	1/1:2,15:17:45.76:379,46,0	1/1:2,8:10:23.88:196,24,0	0/0:24,0:24:69.24:0,69,1652	1/1:1,15:16:46.73:345,47,0	1/1:1,15:16:32.86:260,33,0	0/0:29,0:29:87.30:0,87,2143	1/1:3,15:18:45.02:471,45,0	1/1:0,15:15:44.80:401,45,0	1/1:1,2:3:8.87:63,9,0
chr10	88310378	.	T	TA	12289.97	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=18.019;DP=736;FS=2.335;HRun=5;HaplotypeScore=108.3451;InbreedingCoeff=0.9984;MQ=74.66;MQ0=0;MQRankSum=-0.847;QD=33.31;ReadPosRankSum=0.506;VQSLOD=4.2381;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,1374	0/0:11,0:11:33.08:0,33,355	0/0:16,0:16:45.05:0,45,445	0/0:12,0:12:18.64:0,19,260	1/1:1,31:32:78.10:982,78,0	0/0:29,0:29:84.18:0,84,886	0/0:25,0:25:63.15:0,63,677	1/1:2,27:29:78.22:995,78,0	1/1:1,28:29:75.24:987,75,0	0/0:31,0:31:84.21:0,84,898	0/0:22,0:22:60.13:0,60,637	0/0:30,0:30:81.17:0,81,854	1/1:2,23:25:57.19:750,57,0	0/0:25,0:25:72.13:0,72,754	1/1:1,26:26:78.25:1026,78,0	1/1:2,23:25:63.20:829,63,0	0/0:35,0:35:96.19:0,96,1007	0/0:35,0:35:96.24:0,96,1031	1/1:3,26:29:72.23:946,72,0	1/1:2,26:28:78.09:964,78,0	1/1:2,16:18:42.14:553,42,0	0/0:27,0:27:75.17:0,75,798	1/1:2,27:29:78.25:1025,78,0	1/1:6,30:36:87.28:1145,87,0	0/0:24,0:24:69.15:0,69,732	1/1:6,22:28:69.22:904,69,0	1/1:2,25:27:69.22:908,69,0	1/1:0,7:7:21.07:276,21,0
chr10	88311046	.	GT	G	14894.40	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=15.712;DP=772;FS=4.716;HRun=1;HaplotypeScore=82.0565;InbreedingCoeff=0.9950;MQ=79.05;MQ0=1;MQRankSum=-2.216;QD=39.09;ReadPosRankSum=2.934;VQSLOD=5.6082;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,2272	0/0:12,0:12:36.12:0,36,575	0/0:24,1:24:35.03:0,35,843	0/0:18,0:18:13.91:0,14,514	1/1:0,20:20:60.20:839,60,0	0/0:27,0:27:81.26:0,81,1272	0/0:33,0:33:99:0,99,1514	1/1:0,33:33:96.32:1340,96,0	1/1:0,25:25:72.24:1007,72,0	0/0:27,0:27:75.26:0,75,1200	0/0:18,0:18:54.18:0,54,854	0/0:33,0:33:93.30:0,93,1464	1/1:0,30:30:84.28:1175,84,0	0/0:38,0:38:99:0,114,1819	1/1:0,27:27:72.24:1006,72,0	1/1:0,29:28:81.27:1133,81,0	0/0:41,0:41:99:0,123,1914	0/0:17,0:17:48.16:0,48,762	1/1:0,22:21:60.17:814,60,0	1/1:0,25:25:75.25:1047,75,0	1/1:0,54:54:99:2056,147,0	0/0:34,0:34:99:0,102,1574	1/1:0,21:21:54.18:755,54,0	1/1:0,38:38:99:1510,108,0	0/0:19,0:19:57.19:0,57,908	1/1:1,33:34:54.31:1289,54,0	1/1:0,18:18:51.16:712,51,0	1/1:0,5:5:15.05:210,15,0
chr10	88312045	.	G	GAAT	4264.50	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.676;DP=636;FS=2.140;HRun=0;HaplotypeScore=153.4767;InbreedingCoeff=0.9805;MQ=74.81;MQ0=0;MQRankSum=-9.191;QD=51.38;ReadPosRankSum=-2.482;VQSLOD=5.9881;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,1610	0/0:10,0:10:30.10:0,30,482	0/0:20,0:20:46.41:0,46,665	0/0:21,0:21:48.10:0,48,734	0/0:23,0:23:57.19:0,57,891	0/0:29,0:29:66.22:0,66,1053	0/0:11,0:11:30.10:0,30,482	1/1:11,22:33:75.22:1566,75,0	0/0:20,0:20:50.44:0,50,689	0/0:33,0:33:90.31:0,90,1443	0/0:18,0:18:51.16:0,51,794	0/0:19,0:19:57.18:0,57,892	0/0:28,0:28:78.27:0,78,1215	0/0:26,0:26:72.23:0,72,1134	0/0:19,0:19:51.17:0,51,800	0/0:23,0:23:63.08:0,63,933	0/0:17,0:17:42.10:0,42,621	0/0:31,0:31:90.29:0,90,1419	0/0:22,0:22:60.15:0,60,917	0/0:29,0:29:70.46:0,70,1124	1/1:5,6:11:24.08:487,24,0	0/0:28,0:28:84.29:0,84,1347	0/0:18,0:18:40.34:0,40,629	0/0:12,0:12:18.06:0,18,284	0/0:24,0:24:72.25:0,72,1157	1/1:9,27:36:51.12:2014,51,0	0/0:35,0:35:88.55:0,89,1409	1/1:0,3:3:9.03:198,9,0
chr10	88312066	.	C	CTGAAT	22484.03	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=7.024;DP=647;FS=3.552;HRun=0;HaplotypeScore=132.5516;InbreedingCoeff=0.9841;MQ=74.70;MQ0=0;MQRankSum=-17.313;QD=64.42;ReadPosRankSum=-2.140;VQSLOD=5.4641;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.22:0,69,1404	0/0:12,0:12:33.10:0,33,636	0/0:19,0:19:51.14:0,51,955	0/0:18,0:18:41.90:0,42,762	1/1:5,23:32:56.95:1303,57,0	0/0:21,0:21:60.17:0,60,1164	0/0:10,0:10:30.10:0,30,629	1/1:18,15:33:81.24:2177,81,0	1/1:5,17:25:54.14:1556,54,0	0/0:29,0:29:84.28:0,84,1699	0/0:19,0:19:57.20:0,57,1196	0/0:20,0:20:57.18:0,57,1157	1/1:10,19:32:72.25:2180,72,0	0/0:22,0:22:66.21:0,66,1346	1/1:3,22:26:60.13:1685,60,0	1/1:4,25:29:78.23:2265,78,0	0/0:20,0:20:57.19:0,57,1154	0/0:29,0:29:81.28:0,81,1674	1/1:7,11:20:48.14:1327,48,0	1/1:1,32:33:96.33:2843,96,0	1/1:5,6:13:23.80:354,24,0	0/0:28,0:28:72.23:0,72,1445	1/1:7,11:18:29.90:745,30,0	1/1:3,10:13:18.06:503,18,0	0/0:26,0:26:75.23:0,75,1472	1/1:9,26:36:39.32:2806,39,0	1/1:7,28:35:90.18:2553,90,0	1/1:2,2:4:6.02:185,6,0
chr10	88312878	.	T	TA	9682.97	PASS	AB=0.524;AC=27;AF=0.482;AN=56;BaseQRankSum=16.062;DP=573;FS=3.520;HRun=1;HaplotypeScore=118.5453;InbreedingCoeff=0.9175;MQ=86.67;MQ0=0;MQRankSum=-9.096;QD=36.00;ReadPosRankSum=-0.505;VQSLOD=4.3595;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:96.28:0,96,1215	0/0:2,0:2:6.02:0,6,78	0/0:25,0:25:47.98:0,48,808	0/0:35,0:34:87:0,87,1070	1/1:0,12:12:27.01:355,27,0	0/0:23,0:23:63.19:0,63,802	0/0:22,0:22:66.20:0,66,842	1/1:4,35:39:99:1523,105,0	1/1:1,17:18:51.17:761,51,0	0/0:23,0:23:69.20:0,69,867	0/0:11,0:11:30.10:0,30,389	0/0:27,0:27:75.24:0,75,974	1/1:3,15:18:54.05:734,54,0	0/0:20,0:20:60.19:0,60,777	1/1:1,20:21:57.19:853,57,0	1/1:4,19:23:66.18:961,66,0	0/0:27,0:27:78.24:0,78,998	0/0:27,0:27:81.26:0,81,1047	1/1:2,20:22:66.16:924,66,0	1/1:2,9:11:24.08:360,24,0	1/1:4,22:26:35.68:340,36,0	0/0:9,0:9:21.07:0,21,272	1/1:0,12:12:33.07:469,33,0	1/1:2,21:23:54.06:808,54,0	0/0:15,0:15:39.13:0,39,505	0/1:2,20:22:11.20:833,0,11	1/1:2,11:13:30.10:448,30,0	1/1:0,9:9:21.07:315,21,0
chr10	88312962	.	G	GTT	4237.21	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=4.051;DP=354;FS=5.610;HRun=7;HaplotypeScore=55.8811;InbreedingCoeff=0.8853;MQ=78.07;MQ0=0;MQRankSum=-5.042;QD=22.07;ReadPosRankSum=-1.014;VQSLOD=2.6424;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:18.05:0,18,210	0/0:1,0:1:3.01:0,3,35	0/0:15,0:13:19.96:0,20,227	0/0:15,0:12:7.26:0,7,122	1/1:3,0:12:27.95:112,28,0	0/0:10,0:10:24.06:0,24,280	0/0:8,0:8:21.06:0,21,245	1/1:4,34:38:99:1515,99,0	1/1:1,0:6:14.97:52,15,0	0/0:16,0:16:39.10:0,39,454	0/0:8,0:8:18.05:0,18,209	0/0:10,0:10:18.04:0,18,210	1/1:3,0:8:14.77:60,15,0	0/0:11,0:11:27.06:0,27,302	1/1:3,0:11:23.23:95,23,0	1/1:1,0:11:24.95:88,25,0	0/0:29,0:29:75.20:0,75,863	0/0:13,0:13:33.09:0,33,382	1/1:8,0:23:54.26:246,54,0	1/1:2,0:12:27.95:112,28,0	1/1:3,3:6:8.99:118,9,0	0/0:6,0:6:15.04:0,15,175	1/1:2,0:4:4.99:18,5,0	1/1:2,0:5:7.49:26,7,0	0/0:14,0:14:33.07:0,33,374	1/1:6,8:14:1.12:475,1,0	1/1:1,0:12:27.45:97,27,0	1/1:1,27:29:75.26:1224,75,0
chr10	88315524	.	TTCCAAAAATGCTGAAC	T	22349.62	PASS	AB=0.583;AC=27;AF=0.482;AN=56;BaseQRankSum=18.694;DP=659;FS=4.483;HRun=0;HaplotypeScore=347.3318;InbreedingCoeff=0.9032;MQ=81.64;MQ0=0;MQRankSum=-18.616;QD=84.34;ReadPosRankSum=1.922;VQSLOD=4.0520;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,8307	0/0:6,0:6:18.06:0,18,1254	0/0:23,0:23:60.18:0,60,3177	0/0:21,0:21:51.18:0,51,3187	1/1:7,14:21:27.56:1266,28,0	0/0:19,0:19:57.16:0,57,3818	0/0:30,0:30:87.28:0,87,6025	1/1:11,7:18:21.07:984,21,0	1/1:6,12:18:33.11:1419,33,0	0/0:25,0:25:72.25:0,72,5202	0/0:32,0:32:93.32:0,93,6996	0/0:34,0:34:99:0,99,6508	1/1:7,19:26:54.19:2160,54,0	0/0:43,0:43:99:0,126,8976	1/1:5,22:27:63.22:2708,63,0	1/1:7,22:29:60.21:2640,60,0	0/0:32,0:32:96.33:0,96,7304	0/0:27,0:27:78.27:0,78,5424	1/1:5,7:12:21.07:984,21,0	1/1:1,17:18:48.16:2121,48,0	1/1:5,8:13:21.07:984,21,0	0/0:31,0:31:90.31:0,90,6694	1/1:4,14:18:39.12:1416,39,0	1/1:5,6:11:9.03:365,9,0	0/0:32,0:32:87.30:0,87,6075	0/1:6,15:20:99:1919,0,415	1/1:4,25:29:69.24:3103,69,0	1/1:2,2:4:6.02:281,6,0
chr10	88315876	.	G	GACAAACAAACAAACAA	25208.30	PASS	AB=0.677;AC=26;AF=0.464;AN=56;BaseQRankSum=9.942;DP=679;FS=20.205;HRun=0;HaplotypeScore=281.8916;InbreedingCoeff=0.8397;MQ=69.83;MQ0=1;MQRankSum=-15.076;QD=69.25;ReadPosRankSum=-5.639;VQSLOD=2.4558;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:72.09:0,72,2642	0/0:8,0:8:21.07:0,21,781	0/0:30,0:28:23.41:0,23,403	0/0:23,0:21:21.54:0,22,980	1/1:15,11:27:39.13:2063,39,0	0/0:20,0:20:51.08:0,51,1745	0/0:16,0:16:42.14:0,42,1728	1/1:42,0:39:54.38:1816,54,0	1/1:16,9:28:30.10:1820,30,0	0/0:31,0:31:75.23:0,75,2784	0/0:26,0:26:63.20:0,63,2527	0/0:23,0:23:56.72:0,57,1757	1/1:13,8:24:18.06:1285,18,0	0/0:20,0:20:51.09:0,51,1915	1/1:13,18:34:57.20:3591,57,0	1/1:21,9:35:36.12:2276,36,0	0/0:30,0:30:63.17:0,63,2246	0/0:29,0:29:63.17:0,63,2449	1/1:15,9:27:59.36:2725,59,0	1/1:14,3:19:18.06:894,18,0	1/1:16,0:32:15.01:774,15,0	0/0:9,0:9:26.88:0,27,863	1/1:7,4:13:10.28:593,10,0	0/1:6,3:10:99:337,0,124	0/0:18,0:18:48.14:0,48,1870	0/1:17,0:39:52.37:4052,0,52	1/1:13,13:30:42.10:2628,42,0	1/1:4,0:4:11.95:352,12,0
chr10	88317041	.	A	AC	5624	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-9.435;DP=588;FS=4.250;HRun=6;HaplotypeScore=66.9329;InbreedingCoeff=0.9949;MQ=90.38;MQ0=0;MQRankSum=-3.019;QD=27.57;ReadPosRankSum=2.809;VQSLOD=5.6552;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,102,1011	0/0:4,0:4:12.01:0,12,116	0/0:30,0:30:65.61:0,66,648	0/0:16,0:16:32.26:0,32,346	1/1:3,11:14:33.07:398,33,0	0/0:23,0:23:54.09:0,54,542	0/0:18,0:18:48.11:0,48,489	0/0:35,0:35:90.18:0,90,908	1/1:4,26:30:60.19:755,60,0	0/0:21,0:21:39.49:0,39,469	0/0:11,0:11:33.04:0,33,326	0/0:20,0:20:54.12:0,54,550	1/1:0,16:16:33.11:415,33,0	0/0:20,0:20:54.12:0,54,551	1/1:1,13:14:39.12:491,39,0	1/1:4,16:20:36.12:453,36,0	0/0:33,0:33:75.11:0,75,749	0/0:16,0:16:42.08:0,42,421	1/1:4,17:21:51.16:640,51,0	1/1:2,16:18:45.14:562,45,0	0/0:35,0:35:87.04:0,87,864	0/0:12,0:12:36.08:0,36,367	1/1:1,11:12:27.03:340,27,0	1/1:2,27:29:69.21:855,69,0	0/0:16,0:16:31.05:0,31,352	0/0:22,0:22:51.06:0,51,509	1/1:6,24:30:56.97:716,57,0	0/0:11,0:11:33.07:0,33,335
chr10	88318446	.	G	GA	6403.31	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-6.019;DP=664;FS=0.318;HRun=9;HaplotypeScore=86.4659;InbreedingCoeff=0.9990;MQ=81.52;MQ0=0;MQRankSum=1.376;QD=26.35;ReadPosRankSum=1.357;VQSLOD=4.9035;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:80.79:0,81,687	0/0:9,0:9:23.97:0,24,205	0/0:24,0:23:50.89:0,51,428	0/0:16,1:17:23.58:0,24,218	1/1:4,31:36:96.05:1029,96,0	0/0:36,0:36:98.97:0,99,859	0/0:24,0:24:56.97:0,57,491	0/0:36,0:36:86.96:0,87,755	1/1:3,10:13:27.07:299,27,0	0/0:27,0:27:71.97:0,72,625	0/0:25,0:25:62.95:0,63,547	0/0:25,0:25:59.97:0,60,521	1/1:2,18:21:54.15:597,54,0	0/0:17,0:17:44.95:0,45,383	1/1:5,20:25:57.15:631,57,0	1/1:4,16:21:51.10:551,51,0	0/0:18,0:18:41.95:0,42,357	0/0:11,0:11:32.99:0,33,286	1/1:6,12:18:33.06:354,33,0	1/1:5,19:24:54.11:584,54,0	0/0:21,0:21:56.98:0,57,495	0/0:31,0:31:77.95:0,78,669	1/1:7,16:23:51.14:561,51,0	1/1:2,19:21:57.13:620,57,0	0/0:17,0:17:44.98:0,45,391	0/0:30,0:30:35.75:0,36,605	1/1:1,39:41:99:1178,108,0	0/0:21,1:22:32.81:0,33,514
chr10	88319499	.	T	TG	13515.70	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=0.286;DP=707;FS=4.390;HRun=4;HaplotypeScore=98.4987;InbreedingCoeff=0.9964;MQ=86.48;MQ0=0;MQRankSum=-3.146;QD=25.94;ReadPosRankSum=2.473;VQSLOD=3.7367;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:55:99:0,150,1687	0/0:18,0:18:48.14:0,48,544	0/0:20,0:20:57.13:0,57,625	0/0:29,0:29:63.09:0,63,696	1/1:27,0:27:71.94:479,72,0	1/1:2,27:29:75.24:1014,75,0	1/1:1,24:25:69.23:944,69,0	1/1:3,28:31:84.24:1114,84,0	1/1:29,0:29:76.88:507,77,0	0/0:17,0:17:51.13:0,51,564	0/0:14,0:14:33.09:0,33,374	1/1:3,30:33:84.28:1149,84,0	1/1:33,0:33:85.90:582,86,0	1/1:1,24:25:60.20:820,60,0	1/1:26,0:26:62.04:407,62,0	1/1:18,0:18:41.11:248,41,0	0/0:32,0:32:90.24:0,90,1010	1/1:3,28:31:69.23:943,69,0	1/1:24,0:23:61.53:368,62,0	1/1:21,0:21:56.48:417,56,0	1/1:2,33:35:87.29:1190,87,0	1/1:0,27:27:63.21:862,63,0	1/1:14,0:14:35.54:248,36,0	1/1:31,0:31:79.75:515,80,0	1/1:1,14:15:42.14:575,42,0	1/1:1,15:16:45.15:615,45,0	1/1:24,0:24:22.31:337,22,0	1/1:2,5:7:14.98:182,15,0
chr10	88319503	.	G	GA	12718.73	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=7.417;DP=702;FS=6.600;HRun=1;HaplotypeScore=97.0168;InbreedingCoeff=0.9145;MQ=85.70;MQ0=0;MQRankSum=-5.164;QD=24.46;ReadPosRankSum=3.785;VQSLOD=4.7195;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:99:0,147,1889	0/0:16,0:16:48.16:0,48,623	0/0:21,0:21:60.17:0,60,724	0/0:26,0:26:52.85:0,53,709	1/1:1,25:26:75.21:1098,75,0	1/1:29,0:29:70.87:373,71,0	1/1:24,0:24:66.44:370,66,0	0/1:31,0:31:0.02:262,0,0	1/1:0,30:30:78.26:1168,78,0	0/0:18,0:18:51.17:0,51,662	0/0:18,0:18:44.99:0,45,501	1/1:33,0:33:35.28:390,35,0	1/1:1,32:33:87.29:1302,87,0	1/1:27,0:27:36.04:297,36,0	1/1:0,26:26:63.21:944,63,0	1/1:1,17:18:42.14:627,42,0	0/0:33,0:33:93.29:0,93,1189	1/1:31,0:31:6.23:321,6,0	1/1:1,24:24:69.20:987,69,0	1/1:0,22:22:60.16:866,60,0	1/1:35,0:35:42.03:408,42,0	1/1:27,0:27:37.71:295,38,0	1/1:0,14:14:36.12:538,36,0	1/1:0,31:31:81.27:1213,81,0	1/1:14,0:14:40.30:214,40,0	1/1:15,0:15:42.46:211,42,0	1/1:1,22:23:45.86:786,46,0	1/1:6,0:6:4.96:51,5,0
chr10	88319729	.	C	CCCT	14272.43	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=13.675;DP=720;FS=0.991;HRun=0;HaplotypeScore=125.7350;InbreedingCoeff=0.9976;MQ=86.52;MQ0=0;MQRankSum=-9.767;QD=44.32;ReadPosRankSum=0.755;VQSLOD=6.5185;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,153,2239	0/0:22,0:22:45.15:0,45,670	0/0:28,0:28:59.76:0,60,842	0/0:35,0:35:63.21:0,63,903	1/1:4,18:22:38.18:807,38,0	0/0:22,0:22:51.16:0,51,741	0/0:25,0:25:69.23:0,69,1030	1/1:12,19:32:57.12:1016,57,0	1/1:4,24:29:66.23:1376,66,0	0/0:18,0:18:42.13:0,42,607	0/0:17,0:17:39.13:0,39,583	0/0:31,0:31:81.27:0,81,1209	1/1:9,16:25:48.16:991,48,0	0/0:27,0:27:63.21:0,63,942	1/1:3,28:32:81.28:1694,81,0	1/1:4,23:28:63.22:1318,63,0	0/0:39,0:39:99:0,99,1457	0/0:41,0:41:99:0,99,1455	1/1:7,11:18:39.09:752,39,0	1/1:4,9:13:27.09:565,27,0	1/1:6,20:27:57.20:1185,57,0	0/0:17,0:17:45.12:0,45,633	1/1:2,13:15:36.12:753,36,0	1/1:5,25:30:63.22:1306,63,0	0/0:19,0:19:48.15:0,48,698	1/1:5,13:20:42.13:817,42,0	1/1:4,21:25:66.23:1378,66,0	1/1:1,5:6:15.05:314,15,0
chr10	88320012	.	T	TGGGG	5757.52	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=14.687;DP=548;FS=39.443;HRun=3;HaplotypeScore=111.3321;InbreedingCoeff=0.9779;MQ=98.19;MQ0=0;MQRankSum=-9.592;QD=31.29;ReadPosRankSum=-2.480;VQSLOD=-0.1863;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1731	0/0:20,0:20:60.16:0,60,1011	0/0:34,0:34:87.20:0,87,1452	0/0:29,0:29:72.19:0,72,1229	1/1:2,0:13:24:305,24,0	0/0:21,0:21:54.15:0,54,933	0/0:31,0:31:90.26:0,90,1532	1/1:6,9:16:33.03:633,33,0	1/1:3,0:12:23.90:379,24,0	0/0:25,0:25:72.21:0,72,1211	0/0:12,0:12:33.11:0,33,594	0/0:30,0:30:87.30:0,87,1559	1/1:3,0:15:24.07:329,24,0	0/0:26,0:26:75.22:0,75,1278	1/1:0,1:19:45.15:721,45,0	1/1:1,0:14:33.11:478,33,0	0/0:24,0:24:72.25:0,72,1279	0/0:25,0:25:66.18:0,66,1118	1/1:2,0:14:30.03:353,30,0	1/1:5,0:16:30.02:410,30,0	1/1:4,1:6:5.97:97,6,0	0/0:21,0:21:63.22:0,63,1133	1/1:5,0:9:12.04:185,12,0	1/1:0,0:7:15.01:218,15,0	0/0:30,0:30:84.24:0,84,1412	1/1:4,11:18:41.77:588,42,0	1/1:3,0:15:42.11:600,42,0	1/1:5,3:10:26.99:462,27,0
chr10	88320246	.	TTGA	T	12600.94	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=19.345;DP=657;FS=19.326;HRun=0;HaplotypeScore=130.5039;InbreedingCoeff=0.9917;MQ=88.93;MQ0=0;MQRankSum=-14.272;QD=43.91;ReadPosRankSum=-1.091;VQSLOD=4.8074;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,2518	0/0:16,0:16:48.16:0,48,1119	0/0:28,0:28:81.28:0,81,1792	0/0:31,0:31:87.30:0,87,1964	1/1:0,33:33:81.28:1385,81,0	0/0:32,0:32:96.32:0,96,2187	0/0:25,0:25:72.25:0,72,1647	1/1:4,19:23:54.17:921,54,0	1/1:0,24:24:69.23:1170,69,0	0/0:36,0:36:99:0,108,2422	0/0:30,0:29:87.30:0,87,2016	0/0:25,0:25:72.25:0,72,1677	1/1:0,25:25:69.24:1213,69,0	0/0:25,0:25:72.25:0,72,1679	1/1:0,20:20:57.20:1003,57,0	1/1:0,32:32:81.28:1401,81,0	0/0:30,0:30:87.30:0,87,2024	0/0:17,0:17:51.18:0,51,1189	1/1:2,16:18:45.13:762,45,0	1/1:0,26:26:75.25:1242,75,0	1/1:0,20:20:51.13:854,51,0	0/0:16,0:16:48.16:0,48,1119	1/1:1,11:12:30.10:513,30,0	1/1:3,17:20:36.04:565,36,0	0/0:22,0:22:63.21:0,63,1439	1/1:0,21:21:60.19:1024,60,0	1/1:0,10:10:24.04:388,24,0	1/1:0,3:3:9.03:159,9,0
chr10	88320679	.	G	GT	4144.64	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-14.665;DP=627;FS=3.878;HRun=8;HaplotypeScore=91.5969;InbreedingCoeff=0.9939;MQ=79.23;MQ0=0;MQRankSum=-1.284;QD=28.98;ReadPosRankSum=-0.738;VQSLOD=3.1447;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:68.07:0,68,610	0/0:11,0:11:24.01:0,24,220	0/0:14,0:14:31.54:0,32,270	0/0:17,0:17:14.33:0,14,162	0/0:36,0:36:33.88:0,34,104	1/1:3,23:25:66.20:762,66,0	1/1:2,17:19:23.68:527,24,0	0/0:31,1:32:66:0,66,604	0/0:18,0:18:25.43:0,25,71	0/0:32,0:32:87.04:0,87,796	0/0:21,0:21:60.03:0,60,549	1/1:3,18:21:50.77:586,51,0	0/0:16,0:16:28.64:0,29,95	1/1:1,13:14:36.11:416,36,0	0/0:22,0:22:38.15:0,38,107	0/0:19,0:19:27.24:0,27,77	0/0:20,0:20:51.02:0,51,467	1/1:2,33:35:84.25:969,84,0	0/0:24,0:24:34.35:0,34,113	0/0:34,0:34:59.96:0,60,169	0/0:10,0:10:30.02:0,30,275	1/1:0,28:28:78.19:886,78,0	0/0:23,0:23:35.53:0,36,106	0/0:23,0:23:36.34:0,36,102	0/0:32,0:32:90.04:0,90,824	0/0:20,0:20:57.01:0,57,515	0/0:27,0:27:43.60:0,44,123	0/0:9,0:9:24.01:0,24,219
chr10	88320687	.	TG	T	7835.29	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=2.358;DP=618;FS=2.205;HRun=2;HaplotypeScore=76.1928;InbreedingCoeff=0.9994;MQ=80.71;MQ0=0;MQRankSum=-7.342;QD=33.92;ReadPosRankSum=4.166;VQSLOD=5.1490;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:70.48:0,70,979	0/0:8,0:8:24.08:0,24,340	0/0:18,0:18:48.04:0,48,545	0/0:15,0:15:35.24:0,35,389	1/1:2,29:31:53.26:869,53,0	0/0:23,0:22:68.62:0,69,513	0/0:21,0:21:59.71:0,60,472	0/0:29,0:29:84.25:0,84,1129	1/1:0,15:15:42.14:542,42,0	0/0:32,0:32:96.30:0,96,1316	0/0:20,0:20:60.20:0,60,847	0/0:21,0:21:56.71:0,57,432	1/1:1,14:15:42.14:538,42,0	0/0:13,0:13:35.80:0,36,267	1/1:0,22:22:63.20:814,63,0	1/1:0,17:17:45.15:581,45,0	0/0:19,0:19:57.17:0,57,772	0/0:36,0:36:92.47:0,92,689	1/1:2,22:24:66.15:785,66,0	1/1:0,34:34:99:1298,102,0	0/0:11,0:11:33.10:0,33,449	0/0:32,0:32:92.53:0,93,719	1/1:2,21:23:50.06:703,50,0	1/1:0,22:22:60.20:775,60,0	0/0:33,0:33:96.31:0,96,1342	0/0:22,0:22:66.14:0,66,846	1/1:0,28:28:72.23:929,72,0	0/0:9,0:9:27.09:0,27,379
chr10	88321650	.	CT	C	1485.74	PASS	AB=0.673;AC=30;AF=0.536;AN=56;BaseQRankSum=0.291;DP=502;FS=1.040;HRun=15;HaplotypeScore=74.8899;InbreedingCoeff=0.6435;MQ=73.95;MQ0=4;MQRankSum=0.870;QD=5.36;ReadPosRankSum=5.650;VQSLOD=2.4342;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:27:28.18:0,28,328	0/0:12,3:15:7.80:0,8,182	0/0:29,1:15:9.33:0,9,114	0/0:24,1:13:13.03:0,13,64	1/1:8,20:28:46.98:301,47,0	1/1:4,0:17:18.32:53,18,0	1/1:7,0:13:15.13:54,15,0	0/0:21,0:22:26.45:0,26,224	1/1:9,4:13:14.50:85,15,0	0/0:16,0:16:20.03:0,20,163	0/0:35,0:35:30.20:0,30,347	1/1:2,0:15:16.28:47,16,0	1/1:5,9:15:25.64:160,26,0	1/1:5,0:18:22.37:65,22,0	0/1:5,3:9:10.95:52,0,11	1/1:10,8:20:27.54:165,28,0	0/0:22,0:23:3.75:0,4,196	1/1:4,1:18:25.36:84,25,0	0/1:7,4:11:11.63:62,0,12	0/1:15,15:30:18.52:139,0,19	0/0:2,0:2:0:0,0,0	1/1:3,0:11:8.10:23,8,0	1/1:7,5:13:10.53:63,11,0	0/1:4,7:12:3.62:98,0,4	1/1:8,3:12:13.74:80,14,0	0/0:17,1:19:13.54:0,14,224	1/1:8,12:20:24.63:158,25,0	0/0:9,0:11:26.60:0,27,196
chr10	88321675	.	T	TAA	1631.97	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.411;DP=547;FS=5.784;HRun=8;HaplotypeScore=89.3554;InbreedingCoeff=0.8991;MQ=69.50;MQ0=5;MQRankSum=-2.252;QD=26.32;ReadPosRankSum=-1.780;VQSLOD=3.0443;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:24.54:0,25,426	0/0:17,0:17:37.87:0,38,406	0/0:29,0:12:7.07:0,7,147	0/0:19,0:10:6.96:0,7,20	0/0:35,0:35:62.97:0,63,668	0/0:18,0:18:39.06:0,39,421	0/0:15,0:15:29.98:0,30,293	1/1:4,15:19:44.62:637,45,0	0/0:15,0:15:39.09:0,39,434	0/0:25,0:25:63.15:0,63,696	0/0:23,0:23:39.03:0,39,407	0/0:22,0:22:39.07:0,39,425	0/0:16,0:16:36.08:0,36,400	0/0:19,0:19:54.11:0,54,581	0/0:17,0:17:39.03:0,39,415	0/0:23,0:23:57.10:0,57,614	0/0:24,0:24:48.04:0,48,512	0/0:22,0:22:45.10:0,45,501	0/0:14,0:15:27:0,27,359	0/0:23,0:23:49.51:0,50,516	1/1:1,2:4:3.01:48,3,0	0/0:12,0:12:27.06:0,27,297	0/0:11,0:11:16.78:0,17,199	0/0:16,0:16:32.85:0,33,367	0/0:14,0:14:36.03:0,36,379	1/1:5,14:19:42.11:596,42,0	0/0:29,0:29:54.09:0,54,602	1/1:4,14:18:33.57:503,34,0
chr10	88322394	.	AG	A	2379.16	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-5.500;DP=624;FS=4.283;HRun=4;HaplotypeScore=133.8612;InbreedingCoeff=0.9984;MQ=86.53;MQ0=0;MQRankSum=0.405;QD=30.12;ReadPosRankSum=-1.854;VQSLOD=1.6075;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,1654	0/0:9,0:9:27.09:0,27,388	0/0:28,0:28:67.40:0,67,1057	0/0:20,0:21:59.88:0,60,803	0/0:23,0:23:51.04:0,51,731	0/0:21,0:21:63.20:0,63,887	0/0:26,0:26:72.24:0,72,1035	1/1:2,26:28:78.22:941,78,0	0/0:13,0:13:39.13:0,39,560	0/0:25,0:25:75.25:0,75,1065	0/0:23,0:23:54.18:0,54,769	0/0:22,0:22:60.20:0,60,855	0/0:26,0:26:72.24:0,72,1029	0/0:25,0:25:75.21:0,75,1022	0/0:26,0:26:75.25:0,75,1078	0/0:21,0:21:60.19:0,60,846	0/0:24,0:24:69.23:0,69,982	0/0:25,0:25:69.23:0,69,992	0/0:25,0:25:72.23:0,72,1020	0/0:12,0:12:30.10:0,30,429	1/1:1,28:29:69.22:855,69,0	0/0:22,0:22:60.20:0,60,854	0/0:20,0:20:45.15:0,45,645	0/0:24,0:24:63.21:0,63,904	0/0:15,0:15:39.09:0,39,538	1/1:1,13:14:39.12:482,39,0	0/0:27,0:27:81.27:0,81,1159	1/1:0,8:8:21.07:260,21,0
chr10	88322474	.	TG	T	5743.63	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=10.708;DP=510;FS=0.751;HRun=1;HaplotypeScore=131.4940;InbreedingCoeff=0.9894;MQ=87.47;MQ0=0;MQRankSum=-7.344;QD=39.07;ReadPosRankSum=1.419;VQSLOD=4.4644;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,1820	0/0:8,0:8:24.08:0,24,383	0/0:24,0:24:69.22:0,69,1057	0/0:19,0:19:47.48:0,47,679	1/1:0,8:8:20.98:268,21,0	0/0:18,0:18:54.08:0,54,807	0/0:24,0:24:66.23:0,66,1051	0/0:31,0:31:93.31:0,93,1466	1/1:1,9:10:30.09:404,30,0	0/0:15,0:15:39.13:0,39,622	0/0:14,0:14:36.12:0,36,573	0/0:22,0:22:63.21:0,63,1006	1/1:1,18:19:57.16:774,57,0	0/0:31,0:31:90.31:0,90,1437	1/1:1,17:18:54.12:715,54,0	1/1:1,16:17:51.16:695,51,0	0/0:35,0:35:99:0,102,1629	0/0:18,0:18:48.12:0,48,738	1/1:0,21:21:57.19:795,57,0	1/1:0,7:7:21.07:293,21,0	0/0:28,0:28:75.24:0,75,1174	0/0:12,0:12:30.02:0,30,441	1/1:0,9:9:24.08:335,24,0	1/1:0,14:14:39.09:522,39,0	1/1:1,7:8:24.05:314,24,0	0/0:20,0:20:60.18:0,60,926	1/1:0,16:16:45.15:629,45,0	0/0:3,0:3:9:0,9,118
chr10	88322516	.	G	GTGT	11681.58	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=4.873;DP=418;FS=9.863;HRun=0;HaplotypeScore=87.8218;InbreedingCoeff=0.9290;MQ=96.77;MQ0=0;MQRankSum=-8.866;QD=49.29;ReadPosRankSum=5.754;VQSLOD=6.7515;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.20:0,60,979	0/0:8,0:8:24.08:0,24,371	0/0:23,0:23:59.63:0,60,877	0/0:24,0:24:60.17:0,60,930	1/1:1,4:5:6.02:134,6,0	1/1:1,13:14:39.05:820,39,0	1/1:1,17:18:42.14:935,42,0	0/0:28,0:28:66.22:0,66,1067	1/1:1,8:10:27.01:546,27,0	0/0:11,0:11:30.10:0,30,467	0/0:3,0:3:9.03:0,9,146	1/1:1,18:19:48.16:1071,48,0	1/1:3,19:25:57.11:1212,57,0	1/1:1,15:18:39.05:788,39,0	1/1:2,17:20:48.15:1028,48,0	1/1:1,11:13:33.11:736,33,0	0/0:27,0:27:78.27:0,78,1269	1/1:1,18:19:45.15:1005,45,0	1/1:7,14:21:51.16:1027,51,0	1/1:6,0:6:5.99:50,6,0	0/0:23,0:23:63.21:0,63,1028	1/1:1,4:5:9.03:200,9,0	1/1:1,2:4:6.02:132,6,0	1/1:4,10:14:26.63:601,27,0	1/1:0,8:9:21.07:467,21,0	0/0:9,0:9:24.08:0,24,392	1/1:2,14:17:42.14:930,42,0	0/0:3,0:3:9.03:0,9,147
chr10	88322627	.	A	AT	2685.58	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-11.635;DP=565;FS=1.467;HRun=7;HaplotypeScore=76.6941;InbreedingCoeff=0.9983;MQ=77.36;MQ0=1;MQRankSum=1.868;QD=28.27;ReadPosRankSum=-0.652;VQSLOD=3.9856;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.12:0,75,724	0/0:8,0:8:21.03:0,21,203	0/0:17,0:17:41.09:0,41,382	0/0:16,0:16:31.73:0,32,273	0/0:27,0:27:63.03:0,63,596	0/0:15,0:15:33.04:0,33,319	0/0:30,0:30:54.07:0,54,517	1/1:7,23:31:72.21:856,72,0	0/0:18,0:18:51.08:0,51,492	0/0:17,0:17:48.08:0,48,463	0/0:13,0:13:36.06:0,36,347	0/0:23,0:23:62.13:0,62,585	0/0:20,0:20:42.05:0,42,405	0/0:19,0:19:42.05:0,42,405	0/0:21,0:21:60.10:0,60,579	0/0:15,0:15:45.07:0,45,434	0/0:24,0:23:63.10:0,63,608	0/0:23,0:23:57.07:0,57,543	0/0:17,0:17:48.02:0,48,450	0/0:28,0:28:75.06:0,75,714	1/1:3,21:24:60.18:725,60,0	0/0:18,0:18:52.27:0,52,482	0/0:21,0:21:51.06:0,51,486	0/0:14,0:14:29.94:0,30,276	0/0:18,0:18:48.01:0,48,451	1/1:3,19:22:31.21:649,31,0	0/0:21,0:21:60.09:0,60,579	1/1:1,17:18:51.16:616,51,0
chr10	88322704	.	TTG	T	524.61	PASS	AB=1.000;AC=23;AF=0.442;AN=52;BaseQRankSum=3.254;DP=460;FS=2.366;HRun=0;HaplotypeScore=108.7080;InbreedingCoeff=0.5221;MQ=59.94;MQ0=14;MQRankSum=2.791;QD=2.88;ReadPosRankSum=2.749;VQSLOD=2.4031;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:11.95:0,12,131	./.	./.	0/0:23,0:15:2.50:0,2,9	1/1:18,1:19:5.65:58,6,0	0/0:14,0:14:2.99:0,3,23	0/0:19,0:19:5.99:0,6,50	0/0:20,0:19:14.82:0,15,101	1/1:12,0:12:2.74:32,3,0	0/0:14,0:14:5.34:0,5,128	0/0:19,0:19:9.03:0,9,133	0/0:13,0:12:2.99:0,3,23	1/1:10,1:11:2.69:30,3,0	0/0:21,0:21:3.01:0,3,33	1/1:16,3:19:6:59,6,0	1/1:5,1:6:1.55:4,2,0	0/1:20,0:17:0.67:1,0,238	0/0:16,0:15:13.41:0,13,79	1/1:19,2:20:3.22:128,3,0	1/1:11,1:12:9.01:92,9,0	1/1:17,0:17:0.43:1,0,0	0/0:15,0:15:0:0,0,0	1/1:11,3:14:8.98:88,9,0	1/1:16,2:18:15:145,15,0	0/0:19,0:18:3.01:0,3,35	0/0:19,0:18:17.75:0,18,152	1/1:13,0:12:5.95:42,6,0	0/0:10,0:9:2.98:0,3,22
chr10	88322726	.	G	GTA	497.52	PASS	AB=0.889;AC=16;AF=0.308;AN=52;BaseQRankSum=2.410;DP=376;FS=11.192;HRun=0;HaplotypeScore=93.6103;InbreedingCoeff=0.3509;MQ=39.66;MQ0=18;MQRankSum=0.686;QD=3.34;ReadPosRankSum=4.149;VQSLOD=0.9468;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:20.91:0,21,202	./.	0/0:9,0:3:5.98:0,6,49	0/0:9,0:4:8.99:0,9,93	1/1:13,0:13:1.37:7,1,0	1/1:1,11:12:3.01:58,3,0	1/1:6,16:21:9.03:168,9,0	0/0:20,0:16:43.54:0,44,282	0/0:12,0:12:1.37:0,1,17	0/0:13,0:13:26.07:0,26,255	0/0:15,0:14:8.77:0,9,136	1/1:3,10:12:3.01:58,3,0	0/0:8,0:8:0.21:0,0,1	0/0:4,13:19:2.68:0,3,11	1/1:17,0:17:2.01:9,2,0	0/0:6,0:6:2.97:0,3,20	0/0:19,0:16:32.75:0,33,325	0/1:3,12:14:0.16:260,0,0	0/1:20,0:19:54.90:55,0,68	0/1:9,0:8:2.74:3,0,32	0/0:11,0:10:18.39:0,18,138	./.	0/1:11,0:11:7.51:8,0,23	1/1:17,0:17:0.42:9,0,0	0/0:14,0:13:5.52:0,6,27	0/0:23,0:22:47.64:0,48,348	0/0:9,0:8:10.21:0,10,53	0/0:3,0:2:5.98:0,6,46
chr10	88323493	.	TGCGCGC	T	111.37	PASS	AB=1.000;AC=11;AF=0.423;AN=26;BaseQRankSum=0.655;DP=164;FS=2.621;HRun=0;HaplotypeScore=49.8900;InbreedingCoeff=0.3380;MQ=35.44;MQ0=1;MQRankSum=-1.904;QD=2.78;ReadPosRankSum=-1.155;VQSLOD=1.1752;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:5.71:0,6,164	0/0:2,0:2:5.38:0,5,96	./.	./.	1/1:3,0:3:0.24:0,0,0	1/1:6,0:7:5.95:53,6,0	./.	./.	./.	0/0:6,0:6:17.89:0,18,333	./.	0/0:4,0:5:2.96:0,3,19	0/1:10,0:10:40.53:47,0,41	./.	./.	./.	0/0:6,0:6:9.03:0,9,268	./.	1/1:5,1:4:0.29:54,0,0	./.	./.	./.	./.	1/1:9,1:11:0.47:1,0,0	./.	0/0:1,0:1:2.96:0,3,19	0/0:5,0:4:11.53:0,12,93	1/1:2,0:3:3.01:53,3,0
chr10	88323829	.	G	GT	14984.04	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=9.956;DP=552;FS=8.094;HRun=3;HaplotypeScore=129.5243;InbreedingCoeff=0.9981;MQ=87.06;MQ0=0;MQRankSum=-7.003;QD=36.64;ReadPosRankSum=0.878;VQSLOD=3.2898;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1258	0/0:9,0:9:27.08:0,27,324	0/0:29,0:29:81.12:0,81,907	0/0:18,0:18:43:0,43,482	1/1:1,15:16:42.14:586,42,0	1/1:3,21:24:66.22:901,66,0	1/1:2,25:27:66.22:924,66,0	1/1:0,43:43:99:1720,126,0	1/1:1,15:16:45.15:626,45,0	0/0:17,0:17:48.15:0,48,576	0/0:9,0:9:21.06:0,21,251	1/1:1,26:27:75.25:1034,75,0	1/1:0,14:14:36.12:502,36,0	1/1:3,20:23:60.17:813,60,0	1/1:3,13:16:42.10:558,42,0	1/1:2,18:20:54.18:747,54,0	0/0:25,0:25:69.19:0,69,813	1/1:1,20:21:60.16:813,60,0	1/1:2,10:12:30.08:402,30,0	1/1:4,15:19:39.09:518,39,0	1/1:2,19:21:45.15:630,45,0	1/1:2,16:18:48.16:655,48,0	1/1:1,11:12:33.11:459,33,0	1/1:3,18:21:57.15:772,57,0	1/1:1,16:17:51.17:694,51,0	1/1:3,18:21:24.19:750,24,0	1/1:0,13:13:39.13:544,39,0	1/1:0,8:8:24.08:336,24,0
chr10	88323877	.	AC	A	3960.61	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=16.944;DP=509;FS=1.140;HRun=3;HaplotypeScore=170.3157;InbreedingCoeff=0.9845;MQ=64.20;MQ0=3;MQRankSum=-11.191;QD=14.04;ReadPosRankSum=5.237;VQSLOD=2.9752;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:79.13:0,79,1041	0/0:9,0:9:27.06:0,27,348	0/0:32,0:20:53.81:0,54,622	0/0:25,0:16:44.83:0,45,512	1/1:3,7:10:19.46:113,19,0	1/1:7,16:23:63.28:371,63,0	1/1:9,10:19:26.98:256,27,0	0/0:27,0:26:66.19:0,66,868	1/1:4,12:16:43.10:276,43,0	0/0:18,0:18:54.16:0,54,717	0/0:8,0:8:17.97:0,18,213	1/1:12,13:25:56.57:406,57,0	1/1:4,12:16:38.72:283,39,0	1/1:8,17:25:48.84:370,49,0	1/1:8,11:19:47.23:283,47,0	1/1:4,18:22:61.68:379,62,0	0/0:24,0:24:66.21:0,66,911	1/1:11,7:18:43.94:261,44,0	1/1:3,7:11:17.94:103,18,0	1/1:4,8:12:23.02:148,23,0	0/0:17,0:17:48.11:0,48,620	1/1:6,14:20:35.29:208,35,0	1/1:5,4:9:10.02:83,10,0	1/1:10,11:21:37.25:170,37,0	1/1:0,5:5:12:48,12,0	0/0:26,0:26:75.13:0,75,1005	1/1:3,8:11:31.90:202,32,0	0/0:8,0:8:24.08:0,24,338
chr10	88323879	.	CCA	C	4661.50	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=16.919;DP=500;FS=0.351;HRun=0;HaplotypeScore=173.9864;InbreedingCoeff=0.9897;MQ=62.36;MQ0=4;MQRankSum=-11.354;QD=16.83;ReadPosRankSum=6.450;VQSLOD=4.1900;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:77.73:0,78,1610	0/0:10,0:10:30.09:0,30,539	0/0:30,0:18:53.89:0,54,915	0/0:25,0:16:44.74:0,45,767	1/1:9,0:9:19.22:122,19,0	1/1:22,1:23:63.74:432,64,0	1/1:19,0:19:29.40:260,29,0	0/0:26,0:25:72.19:0,72,1315	1/1:15,0:15:44.31:332,44,0	0/0:19,0:19:57.20:0,57,1118	0/0:9,0:9:20.99:0,21,339	1/1:23,0:23:59.77:494,60,0	1/1:15,1:16:38.62:310,39,0	1/1:24,0:24:49.82:437,50,0	1/1:17,2:19:50.37:342,50,0	1/1:20,2:22:64.35:459,64,0	0/0:23,0:23:66.23:0,66,1336	1/1:18,0:18:41.88:302,42,0	1/1:13,0:13:23.68:122,24,0	1/1:11,0:11:27.76:192,28,0	0/0:17,0:17:48.16:0,48,962	1/1:19,0:20:36.12:261,36,0	1/1:7,0:7:11.68:109,12,0	1/1:21,0:21:35.98:196,36,0	1/1:5,0:5:13.77:69,14,0	0/0:26,0:26:78.23:0,78,1495	1/1:11,0:11:29.60:222,30,0	0/0:8,0:8:24.08:0,24,481
chr10	88323883	.	AAC	A	5362.26	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=16.634;DP=492;FS=0.744;HRun=0;HaplotypeScore=167.0924;InbreedingCoeff=0.9932;MQ=58.95;MQ0=4;MQRankSum=-11.458;QD=19.86;ReadPosRankSum=5.888;VQSLOD=5.0769;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:77.28:0,77,1531	0/0:10,0:10:24.08:0,24,446	0/0:28,0:16:45.15:0,45,799	0/0:24,0:15:27.10:0,27,637	1/1:2,7:9:20.32:151,20,0	1/1:5,16:21:59.25:459,59,0	1/1:6,10:16:34.58:299,35,0	0/0:26,0:25:68.31:0,68,1204	1/1:2,12:14:41.81:355,42,0	0/0:19,0:19:57.18:0,57,1017	0/0:6,0:6:18.06:0,18,320	1/1:12,13:25:26.08:531,26,0	1/1:2,12:14:34.94:289,35,0	1/1:8,17:25:57.55:503,58,0	1/1:6,11:17:44.21:335,44,0	1/1:2,18:20:59.56:470,60,0	0/0:26,0:26:72.23:0,72,1302	1/1:12,7:19:42.66:339,43,0	1/1:5,9:13:30.02:258,30,0	1/1:3,8:11:30.86:238,31,0	0/0:18,0:18:50.37:0,50,674	1/1:6,15:21:46.55:357,47,0	1/1:3,4:7:17.64:141,18,0	1/1:10,11:21:40.92:290,41,0	1/1:0,5:5:14.63:89,15,0	0/0:26,0:26:78.02:0,78,1217	1/1:3,8:11:29.91:256,30,0	0/0:8,0:8:24.07:0,24,364
chr10	88323888	.	TAAC	T	3011.82	PASS	AB=0.757;AC=39;AF=0.750;AN=52;BaseQRankSum=9.089;DP=493;FS=1.964;HRun=0;HaplotypeScore=181.1487;InbreedingCoeff=0.4531;MQ=55.48;MQ0=7;MQRankSum=-6.633;QD=8.58;ReadPosRankSum=2.693;VQSLOD=3.4890;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:62.45:0,62,992	0/0:7,0:10:3.01:0,3,39	./.	./.	0/1:6,0:9:9.70:20,0,10	1/1:15,0:22:20.84:127,21,0	1/1:17,0:20:9.52:56,10,0	1/1:27,0:25:8.91:61,9,0	1/1:7,0:14:20.15:124,20,0	0/0:18,0:18:36.12:0,36,693	0/0:8,0:7:15.03:0,15,255	0/1:18,8:26:19.64:247,0,20	1/1:6,0:13:20.81:144,21,0	1/1:16,10:26:36.52:440,37,0	1/1:11,0:15:8.55:52,9,0	1/1:12,0:20:23.76:164,24,0	0/0:25,0:25:45.13:0,45,816	1/1:17,1:18:0.78:45,1,0	1/1:12,0:12:2.82:20,3,0	1/1:8,0:11:5.95:42,6,0	1/1:8,11:19:48.16:629,48,0	1/1:17,4:20:4.82:132,5,0	1/1:5,0:6:2.50:9,2,0	1/1:15,0:18:2.91:20,3,0	1/1:4,0:5:2.98:21,3,0	0/1:19,9:28:54.37:528,0,54	1/1:7,0:11:14.82:100,15,0	1/1:4,4:8:15.05:199,15,0
chr10	88324310	.	T	TC	21020.65	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=12.585;DP=730;FS=7.325;HRun=0;HaplotypeScore=118.4063;InbreedingCoeff=0.9524;MQ=73.87;MQ0=0;MQRankSum=-2.209;QD=36.75;ReadPosRankSum=1.101;VQSLOD=3.8577;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1676	0/0:15,0:15:45.14:0,45,614	0/0:14,0:14:23.39:0,23,344	0/0:10,0:10:1.13:0,1,67	1/1:1,15:16:32.90:404,33,0	1/1:0,15:15:42.07:598,42,0	1/1:0,40:40:93.25:1364,93,0	1/1:1,32:33:96.29:1379,96,0	1/1:0,30:30:69.17:1005,69,0	0/0:32,0:32:96.27:0,96,1254	0/0:14,0:14:42.13:0,42,569	1/1:0,44:44:99:1698,114,0	1/1:1,33:34:78.15:1137,78,0	1/1:0,33:33:81.27:1212,81,0	1/1:0,35:35:96.33:1434,96,0	1/1:0,24:24:60.20:896,60,0	0/0:32,0:32:51.43:0,51,1157	1/1:0,29:29:75.25:1119,75,0	1/1:0,27:28:82.02:1063,82,0	1/1:1,17:18:45.08:645,45,0	1/1:1,55:56:99:2020,135,0	1/1:2,14:16:33.02:466,33,0	1/1:0,17:17:41.88:627,42,0	1/1:0,27:27:78.18:1138,78,0	1/1:1,24:25:69.16:995,69,0	1/1:1,16:17:12.91:639,13,0	1/1:0,21:20:48.08:689,48,0	1/1:0,14:14:33.11:494,33,0
chr10	88324897	.	G	GTTTTTT	17499.26	PASS	AB=0.700;AC=41;AF=0.732;AN=56;BaseQRankSum=14.466;DP=421;FS=27.478;HRun=3;HaplotypeScore=204.2368;InbreedingCoeff=0.8756;MQ=86.12;MQ0=0;MQRankSum=-15.065;QD=63.63;ReadPosRankSum=-3.375;VQSLOD=0.4248;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.21:0,84,1641	0/0:6,0:6:18.06:0,18,396	0/0:23,0:23:57.69:0,58,1193	0/0:15,0:16:11.67:0,12,580	1/1:14,9:23:50.95:1208,51,0	1/1:8,5:13:33.04:945,33,0	1/1:4,3:8:20.99:481,21,0	1/1:15,3:18:32.86:470,33,0	1/1:4,3:7:20.95:475,21,0	0/0:25,0:25:72.23:0,72,1506	0/0:19,0:19:57.17:0,57,1171	1/1:8,2:10:30.06:911,30,0	1/1:7,6:14:38.96:943,39,0	1/1:5,7:12:36.12:1128,36,0	1/1:9,2:12:35.91:763,36,0	1/1:4,5:9:24.01:587,24,0	0/0:28,0:28:78.17:0,78,1612	1/1:6,1:8:18.06:510,18,0	1/1:9,2:11:24.01:557,24,0	1/1:10,4:14:32.98:765,33,0	1/1:5,1:6:12:303,12,0	1/1:6,8:15:42.06:1235,42,0	1/1:11,3:14:38.94:677,39,0	1/1:2,2:4:6.02:162,6,0	1/1:10,1:22:63.08:1582,63,0	0/1:8,6:14:26.89:949,0,27	1/1:18,6:24:66:1752,66,0	1/1:8,7:17:45.01:1094,45,0
chr10	88324947	.	CA	C	255.98	PASS	AB=0.914;AC=13;AF=0.232;AN=56;BaseQRankSum=1.736;DP=421;FS=5.863;HRun=3;HaplotypeScore=163.7296;InbreedingCoeff=-0.0906;MQ=70.88;MQ0=2;MQRankSum=-3.935;QD=1.58;ReadPosRankSum=1.635;VQSLOD=-0.1355;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:44.13:0,44,484	0/0:10,0:10:22.27:0,22,218	0/0:37,1:31:19.50:0,20,664	0/0:24,1:13:4.10:0,4,103	0/1:13,2:17:31.43:48,0,31	0/1:9,0:13:0.40:0,0,90	0/1:13,0:13:21.12:21,0,54	0/0:25,2:27:14.67:0,15,367	0/1:5,1:8:16.12:22,0,16	0/0:11,0:11:33.04:0,33,314	0/0:16,0:16:28.60:0,29,291	0/1:14,0:17:27.01:27,0,29	0/0:7,0:7:9.37:0,9,60	0/0:6,0:6:0.61:0,1,32	0/1:7,4:11:22.98:102,0,23	0/1:10,2:12:12.16:12,0,29	0/0:21,1:22:27.57:0,28,457	1/1:5,0:6:5.54:20,6,0	0/0:14,2:16:3.70:0,4,221	0/0:12,0:13:12.85:0,13,62	0/0:6,0:6:8.90:0,9,77	0/1:14,1:18:30.22:30,0,48	0/1:9,1:10:5.60:6,0,51	0/1:8,0:8:0.02:0,0,0	0/0:9,0:13:24.48:0,24,112	0/0:16,0:16:47.37:0,47,377	0/1:23,6:28:99:106,0,193	0/0:12,0:12:23.71:0,24,195
chr10	88324948	.	AC	A	1249.59	PASS	AB=0.939;AC=33;AF=0.589;AN=56;BaseQRankSum=3.429;DP=293;FS=7.785;HRun=11;HaplotypeScore=96.1796;InbreedingCoeff=0.2777;MQ=81.21;MQ0=2;MQRankSum=-4.223;QD=5.84;ReadPosRankSum=2.387;VQSLOD=1.7560;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:17,5:22:56.69:57,0,231	0/0:9,1:10:21.02:0,21,202	0/1:36,1:30:27.59:28,0,280	0/1:23,1:13:5.70:6,0,38	0/1:6,0:6:15.21:34,0,15	1/1:4,4:8:8.84:108,9,0	1/1:0,7:7:20.98:172,21,0	0/1:18,0:18:17.03:17,0,74	1/1:3,3:6:16.42:113,16,0	0/0:11,0:11:2.92:0,3,17	0/0:16,0:16:2.04:0,2,164	1/1:3,8:11:30.78:219,31,0	1/1:2,0:2:2.91:17,3,0	1/1:0,1:1:3:25,3,0	1/1:5,0:5:12.63:62,13,0	1/1:7,1:8:3.09:18,3,0	0/0:19,0:19:8.45:0,8,284	1/1:1,4:5:13.80:103,14,0	0/1:5,1:6:8.44:42,0,8	1/1:7,0:8:0.22:29,0,0	0/0:4,0:4:2.95:0,3,22	1/1:4,6:10:27.63:194,28,0	1/1:5,0:6:0.47:17,0,0	0/1:5,0:5:0:0,0,0	0/0:4,0:7:0.38:0,0,25	0/0:6,0:6:14.82:0,15,100	1/1:17,0:17:27.92:158,28,0	0/0:6,0:6:16.28:0,16,96
chr10	88324949	.	C	CAAACAAACAAACAAACA	16858.55	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=9.318;DP=297;FS=2.324;HRun=0;HaplotypeScore=197.5498;InbreedingCoeff=0.7002;MQ=82.26;MQ0=2;MQRankSum=-10.071;QD=106.70;ReadPosRankSum=5.021;VQSLOD=4.8784;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:35.37:0,35,1986	0/0:10,0:10:27.07:0,27,708	0/0:37,0:30:32.77:0,33,1332	0/0:27,0:15:17.48:0,17,336	1/1:6,0:6:17.80:930,18,0	1/1:5,3:8:24.07:1540,24,0	1/1:8,0:8:21.04:1064,21,0	0/1:18,0:18:8.80:734,0,9	1/1:4,2:6:18.05:1045,18,0	0/0:10,0:10:27.08:0,27,944	0/0:16,0:16:32.94:0,33,1133	1/1:9,3:12:33.08:1874,33,0	1/1:2,0:2:5.93:198,6,0	1/1:2,0:2:3:233,3,0	1/1:5,0:5:14.48:370,14,0	1/1:8,0:8:6.19:158,6,0	0/0:18,0:18:54.16:0,54,2265	1/1:5,1:6:15.05:1124,15,0	1/1:6,0:6:14.92:458,15,0	1/1:8,0:8:17.98:671,18,0	1/1:4,0:4:3.86:27,4,0	1/1:8,3:11:30.08:1662,30,0	1/1:6,0:6:15.05:732,15,0	1/1:5,0:5:9.92:372,10,0	1/1:7,0:7:19.88:959,20,0	0/1:6,0:6:4.20:497,0,4	1/1:18,0:17:37.68:1609,38,0	0/1:6,0:6:3.12:600,0,3
chr10	88324958	.	CCA	C	395.32	PASS	AB=0.927;AC=16;AF=0.286;AN=56;BaseQRankSum=1.301;DP=343;FS=3.726;HRun=0;HaplotypeScore=125.2628;InbreedingCoeff=0.6698;MQ=78.02;MQ0=2;MQRankSum=-5.980;QD=4.03;ReadPosRankSum=0.774;VQSLOD=2.8712;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:62.59:0,63,707	0/0:9,0:9:24.04:0,24,349	0/0:31,0:24:59.94:0,60,587	0/0:27,0:16:23.34:0,23,236	0/1:12,0:12:10.38:10,0,21	0/0:9,0:9:26.22:0,26,188	0/0:10,0:10:28.74:0,29,157	0/0:22,0:22:23.89:0,24,337	0/0:8,0:8:23.23:0,23,152	0/0:9,0:9:21.04:0,21,216	0/0:16,0:16:37.89:0,38,501	0/0:14,0:14:40.55:0,41,254	1/1:4,0:4:7.70:41,8,0	0/0:3,0:3:8.77:0,9,54	1/1:6,0:6:13.73:84,14,0	1/1:9,0:9:6.41:62,6,0	0/0:23,0:23:56.96:0,57,733	0/0:7,0:7:20.28:0,20,125	0/1:8,2:10:1.61:106,0,2	1/1:11,1:12:12.50:101,12,0	0/0:4,0:4:6.90:0,7,70	0/0:11,0:11:31.68:0,32,196	0/1:6,1:7:0.81:38,0,1	1/1:8,1:9:5.61:38,6,0	0/1:10,0:10:4.92:5,0,125	0/0:10,0:10:29.95:0,30,280	1/1:17,2:18:15.50:88,16,0	0/0:8,0:8:23.98:0,24,232
chr10	88324959	.	CA	C	1046.46	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=2.728;DP=335;FS=5.536;HRun=3;HaplotypeScore=121.1565;InbreedingCoeff=0.6818;MQ=77.46;MQ0=2;MQRankSum=-7.788;QD=8.58;ReadPosRankSum=5.373;VQSLOD=0.9774;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:41.43:0,41,416	0/0:9,0:9:18.05:0,18,223	0/0:30,0:23:23.33:0,23,363	0/0:24,0:16:17.66:0,18,173	1/1:11,1:12:12.44:127,12,0	0/0:8,0:9:3.63:0,4,57	0/1:13,0:13:2.06:2,0,90	0/0:21,0:22:42.10:0,42,353	0/0:10,0:10:6.14:0,6,98	0/0:9,0:9:24.04:0,24,230	0/0:15,0:15:36.35:0,36,377	0/1:14,0:14:4.82:5,0,64	1/1:2,1:3:8.91:73,9,0	0/0:3,0:3:3.10:0,3,35	1/1:5,1:6:17.92:177,18,0	1/1:7,2:9:8.92:74,9,0	0/0:20,0:20:51.96:0,52,560	0/0:7,0:7:3.91:0,4,47	1/1:10,0:10:17.76:157,18,0	1/1:8,4:12:20.44:154,20,0	0/0:4,0:4:6.87:0,7,61	0/1:12,0:12:6.13:6,0,46	1/1:5,1:6:8.61:63,9,0	1/1:7,1:8:5.60:38,6,0	0/0:10,0:10:29.33:0,29,205	0/0:10,0:10:29.95:0,30,296	1/1:11,6:17:35.89:365,36,0	0/0:9,0:9:26.97:0,27,268
chr10	88325013	.	GC	G	9769.80	PASS	AB=0.531;AC=41;AF=0.732;AN=56;BaseQRankSum=14.636;DP=464;FS=10.112;HRun=3;HaplotypeScore=118.5558;InbreedingCoeff=0.8691;MQ=78.28;MQ0=0;MQRankSum=-13.054;QD=31.21;ReadPosRankSum=-0.309;VQSLOD=3.1454;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1581	0/0:8,0:8:24.08:0,24,344	0/0:23,0:23:66.21:0,66,928	0/0:18,0:18:42.13:0,42,586	1/1:1,17:18:42.13:520,42,0	1/1:0,13:13:27.08:334,27,0	1/1:3,15:18:42.13:520,42,0	1/1:1,16:17:45.13:545,45,0	1/1:1,17:18:51.16:632,51,0	0/0:24,0:24:72.24:0,72,1021	0/0:13,0:13:39.12:0,39,544	1/1:1,14:15:36.11:446,36,0	1/1:1,15:16:42.13:517,42,0	1/1:0,8:8:24.08:297,24,0	1/1:0,17:17:45.14:557,45,0	1/1:0,15:15:45.14:557,45,0	0/0:27,0:27:81.27:0,81,1166	1/1:1,15:16:1.95:477,2,0	1/1:1,18:19:48.15:593,48,0	1/1:3,16:19:42.13:520,42,0	1/1:1,12:13:24.07:297,24,0	1/1:0,13:13:36.11:445,36,0	1/1:0,7:7:12.04:149,12,0	1/1:0,17:17:39.12:483,39,0	1/1:0,10:10:30.09:372,30,0	0/1:2,15:17:35.27:506,0,35	1/1:0,14:14:42.13:520,42,0	1/1:0,13:13:39.12:483,39,0
chr10	88325599	.	G	GA	10899.02	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-4.694;DP=541;FS=1.319;HRun=9;HaplotypeScore=64.1464;InbreedingCoeff=0.9940;MQ=68.31;MQ0=0;MQRankSum=-0.570;QD=25.77;ReadPosRankSum=0.367;VQSLOD=5.3395;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:68.97:0,69,599	0/0:10,0:10:29.99:0,30,260	0/0:7,0:6:14.99:0,15,130	0/0:10,0:10:24.87:0,25,207	1/1:3,14:17:39.06:418,39,0	1/1:4,25:29:69.19:763,69,0	1/1:2,19:21:48.13:531,48,0	1/1:7,25:33:78.50:835,78,0	1/1:1,0:19:48.29:242,48,0	0/0:12,0:12:26.95:0,27,230	0/0:12,0:12:35.99:0,36,313	1/1:0,25:25:69.19:763,69,0	1/1:1,20:22:63:678,63,0	1/1:1,11:12:33.09:365,33,0	1/1:3,20:23:42.11:465,42,0	1/1:1,8:9:22.61:236,23,0	0/0:23,0:23:44.29:0,44,524	1/1:2,17:19:42.11:465,42,0	1/1:5,15:20:45.11:491,45,0	1/1:2,19:22:56.99:611,57,0	1/1:0,22:22:54.15:597,54,0	1/1:2,21:23:57.11:617,57,0	1/1:3,15:18:42.11:464,42,0	1/1:2,19:21:60.15:656,60,0	0/0:18,0:17:41.97:0,42,360	1/1:5,28:34:40.98:891,41,0	1/1:5,12:17:39.09:423,39,0	1/1:3,13:17:15.90:386,16,0
chr10	88327231	.	G	GT	2555.96	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-9.891;DP=657;FS=0.435;HRun=8;HaplotypeScore=62.5931;InbreedingCoeff=0.9969;MQ=67.07;MQ0=2;MQRankSum=-0.150;QD=21.85;ReadPosRankSum=-2.018;VQSLOD=3.1198;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,144,1304	0/0:12,0:12:33.01:0,33,302	0/0:21,0:16:30.41:0,30,268	0/0:14,0:11:21.01:0,21,190	0/0:19,0:19:45.02:0,45,412	0/0:25,0:25:40.82:0,41,551	0/0:25,0:25:75.04:0,75,686	1/1:7,19:26:52.40:591,52,0	1/1:3,21:24:51.15:589,51,0	0/0:26,0:26:69:0,69,624	0/0:19,0:19:51.02:0,51,467	0/0:17,0:17:48.02:0,48,439	0/0:22,0:22:51:0,51,461	0/0:31,0:31:87.05:0,87,796	0/0:25,0:25:69.02:0,69,626	0/0:21,0:21:51.01:0,51,467	0/0:31,0:30:87.49:0,87,791	0/0:29,0:29:44.26:0,44,582	0/0:18,0:18:45:0,45,406	0/0:19,0:19:39.01:0,39,357	1/1:0,28:28:57.17:658,57,0	0/0:21,0:21:60.03:0,60,549	0/0:12,0:11:33.02:0,33,302	0/0:37,0:37:99:0,99,906	0/0:18,0:18:51.03:0,51,465	1/1:2,21:23:63.15:699,63,0	0/0:22,0:22:66.04:0,66,604	1/1:1,15:16:18.02:194,18,0
chr10	88327375	.	TCTCGAG	T	10325.15	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=5.456;DP=645;FS=0.000;HRun=0;HaplotypeScore=158.9404;InbreedingCoeff=0.9972;MQ=85.00;MQ0=0;MQRankSum=-16.970;QD=53.78;ReadPosRankSum=0.490;VQSLOD=4.7154;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,166,5893	0/0:6,0:6:18.06:0,18,596	0/0:22,0:22:63.22:0,63,2098	0/0:31,0:30:75.26:0,75,2627	1/1:1,18:19:42.10:923,42,0	0/0:29,0:29:84.29:0,84,2880	0/0:30,0:30:90.31:0,90,3080	0/0:22,0:22:66.16:0,66,2097	0/0:15,0:15:39.13:0,39,1366	0/0:22,0:22:66.23:0,66,2245	0/0:18,0:18:51.17:0,51,1774	0/0:20,0:20:60.19:0,60,1968	1/1:0,18:18:48.16:1148,48,0	0/0:26,0:26:72.25:0,72,2490	1/1:1,22:23:60.16:1389,60,0	1/1:0,16:16:48.08:1029,48,0	0/0:44,0:43:99:0,126,4416	0/0:26,0:26:75.26:0,75,2638	1/1:2,10:12:27.08:578,27,0	1/1:0,25:25:75.21:1618,75,0	0/0:31,0:31:93.32:0,93,3228	0/0:22,0:22:60.17:0,60,1954	1/1:0,16:16:33.07:676,33,0	1/1:5,17:22:29.80:616,30,0	1/1:4,13:17:29.99:616,30,0	0/0:27,0:27:78.24:0,78,2347	1/1:0,24:24:72.25:1730,72,0	0/0:6,0:6:18.06:0,18,648
chr10	88327939	.	G	GA	509.03	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=5.289;DP=197;FS=24.801;HRun=1;HaplotypeScore=33.8053;InbreedingCoeff=0.7199;MQ=50.59;MQ0=9;MQRankSum=-4.689;QD=22.13;ReadPosRankSum=-1.684;VQSLOD=1.7459;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:53.65:0,54,625	0/0:2,0:2:5.99:0,6,61	0/0:12,0:1:3.01:0,3,39	./.	0/0:14,0:14:42.12:0,42,524	0/0:2,0:2:6.02:0,6,77	0/0:5,0:4:11.94:0,12,116	1/1:1,4:5:14.99:176,15,0	1/1:0,2:2:6.02:88,6,0	0/0:6,0:5:9.03:0,9,116	0/0:12,0:12:32.89:0,33,413	0/0:4,0:4:9.03:0,9,111	0/0:10,0:9:21.06:0,21,259	0/0:4,0:4:9.03:0,9,116	0/0:7,0:6:12.03:0,12,141	0/0:6,0:6:18.06:0,18,233	0/0:7,0:7:21.04:0,21,254	0/0:2,0:2:2.99:0,3,24	0/0:9,0:7:21.07:0,21,271	0/0:9,0:9:24.06:0,24,292	1/1:1,1:2:6:67,6,0	0/0:7,0:6:12.04:0,12,155	0/0:5,0:5:12.04:0,12,152	0/0:7,0:7:9:0,9,89	0/0:7,0:7:15.04:0,15,182	1/1:0,6:6:18.02:241,18,0	0/0:7,0:7:18.06:0,18,233	1/1:5,3:8:6.02:88,6,0
chr10	88328018	.	T	TA	2120.34	PASS	AB=1.000;AC=21;AF=0.404;AN=52;BaseQRankSum=7.028;DP=301;FS=9.513;HRun=8;HaplotypeScore=54.0334;InbreedingCoeff=0.8824;MQ=60.98;MQ0=10;MQRankSum=-4.860;QD=21.86;ReadPosRankSum=-0.354;VQSLOD=3.4501;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:94.81:0,95,845	0/0:3,0:3:9:0,9,82	./.	./.	0/0:12,0:11:30.01:0,30,267	1/1:1,9:10:18.64:298,19,0	1/1:0,6:6:15.04:173,15,0	1/1:10,7:18:47.59:440,48,0	1/1:6,1:7:16.57:144,17,0	0/0:14,0:14:33.01:0,33,302	0/0:11,0:11:27.01:0,27,247	1/1:1,7:7:21.06:242,21,0	0/0:9,0:9:23.97:0,24,206	1/1:0,4:4:9.03:103,9,0	0/0:9,0:8:17.98:0,18,153	0/0:5,0:5:8.99:0,9,82	0/0:23,0:22:66.01:0,66,597	1/1:1,10:11:29.58:320,30,0	0/0:13,0:11:29.96:0,30,258	0/0:12,0:12:24.01:0,24,218	1/1:3,1:4:9.01:88,9,0	1/1:1,2:3:6.02:69,6,0	0/0:8,0:8:21.01:0,21,190	0/0:12,0:11:21.01:0,21,191	0/0:15,0:14:41.97:0,42,374	0/1:12,0:12:3.27:166,0,3	0/0:7,0:7:15.01:0,15,135	1/1:14,0:14:38.46:280,38,0
chr10	88328028	.	T	TAA	2844.66	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-8.119;DP=320;FS=11.833;HRun=10;HaplotypeScore=60.7741;InbreedingCoeff=0.9160;MQ=66.66;MQ0=4;MQRankSum=2.499;QD=26.10;ReadPosRankSum=0.377;VQSLOD=2.0054;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:89.86:0,90,883	0/0:5,0:5:11.97:0,12,112	0/0:4,0:4:5.91:0,6,48	0/0:9,0:5:8.90:0,9,74	1/1:3,10:12:27.09:401,27,0	0/0:10,0:10:27.03:0,27,259	0/0:7,0:7:14.98:0,15,138	0/0:18,0:18:28.56:0,29,183	0/0:6,0:7:20.29:0,20,116	0/0:15,0:15:36.01:0,36,362	0/0:11,0:11:24.04:0,24,243	0/0:7,0:7:20.99:0,21,188	1/1:2,6:8:18.06:268,18,0	0/0:4,0:4:5.95:0,6,48	1/1:2,6:7:15.05:223,15,0	1/1:1,6:7:12.04:179,12,0	0/0:29,0:28:81.15:0,81,824	0/0:14,0:15:19.58:0,20,289	1/1:2,9:12:28.28:348,28,0	1/1:1,13:14:33.07:467,33,0	0/0:5,0:5:11.40:0,11,62	0/0:4,0:4:9:0,9,80	1/1:3,6:9:15.05:224,15,0	1/1:4,9:12:12.04:179,12,0	1/1:1,14:16:41.63:590,42,0	0/0:9,0:9:19.89:0,20,122	1/1:1,7:8:12.04:179,12,0	0/0:14,0:14:38.74:0,39,295
chr10	88329692	.	TACACACAC	T	4150.99	PASS	AB=0.922;AC=26;AF=0.565;AN=46;BaseQRankSum=7.994;DP=353;FS=6.577;HRun=0;HaplotypeScore=136.5846;InbreedingCoeff=0.6040;MQ=55.31;MQ0=4;MQRankSum=-6.898;QD=19.49;ReadPosRankSum=1.342;VQSLOD=2.4585;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:33.09:0,33,950	0/0:5,0:5:9.03:0,9,366	./.	./.	1/1:21,3:24:22.82:371,23,0	0/0:7,0:7:4.22:0,4,72	1/1:5,0:7:12.04:163,12,0	1/1:13,0:12:9:100,9,0	0/0:3,0:3:6.02:0,6,217	0/0:15,0:15:21.07:0,21,663	0/0:24,0:24:51.03:0,51,1535	0/1:7,0:7:11.78:12,0,112	1/1:9,2:12:18.02:344,18,0	./.	1/1:10,1:11:15.05:323,15,0	1/1:10,2:12:12.04:263,12,0	0/0:23,0:22:42.61:0,43,1251	0/1:18,0:22:99:251,0,192	1/1:11,3:14:12.02:278,12,0	0/1:17,4:21:3.90:367,0,4	./.	./.	1/1:8,2:11:9.03:176,9,0	1/1:9,1:10:11.93:258,12,0	1/1:16,0:19:18.06:302,18,0	0/1:5,0:5:0.53:1,0,72	1/1:19,5:23:45.11:942,45,0	0/0:9,0:9:6.68:0,7,56
chr10	88329728	.	CAT	C	1235.94	PASS	AB=0.958;AC=23;AF=0.479;AN=48;BaseQRankSum=7.604;DP=341;FS=7.655;HRun=0;HaplotypeScore=116.8721;InbreedingCoeff=0.6193;MQ=48.17;MQ0=6;MQRankSum=-5.643;QD=5.94;ReadPosRankSum=3.235;VQSLOD=2.7532;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:17.61:18,0,199	0/0:5,0:5:12.01:0,12,140	./.	./.	1/1:20,1:22:29.06:167,29,0	0/0:5,0:5:12:0,12,116	0/0:6,0:6:5.94:0,6,43	0/0:23,0:19:41.57:0,42,294	0/0:6,0:6:5.96:0,6,44	0/1:13,0:13:7.17:7,0,166	0/1:18,3:21:5.92:6,0,295	0/0:6,0:6:11.05:0,11,124	1/1:12,0:12:20.31:114,20,0	./.	1/1:10,0:11:17.40:99,17,0	1/1:13,0:13:11:53,11,0	0/0:26,0:27:2.88:0,3,345	0/0:20,0:20:26.70:0,27,324	1/1:12,0:10:19.58:132,20,0	1/1:15,2:17:32.37:210,32,0	0/0:3,0:2:2.99:0,3,24	./.	1/1:10,0:10:17.68:123,18,0	1/1:7,3:11:20.22:124,20,0	1/1:13,0:15:17.17:89,17,0	0/0:9,0:8:6.44:0,6,58	1/1:26,0:26:49.37:276,49,0	0/0:14,0:14:2.74:0,3,12
chr10	88329806	.	AGTAT	A	9595.42	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=9.605;DP=465;FS=4.567;HRun=0;HaplotypeScore=97.3558;InbreedingCoeff=0.9957;MQ=93.83;MQ0=0;MQRankSum=-6.900;QD=47.74;ReadPosRankSum=4.647;VQSLOD=5.1008;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.24:0,69,1879	0/0:8,0:8:24.08:0,24,657	0/0:29,0:29:73.91:0,74,1743	0/0:17,0:17:41.23:0,41,969	1/1:1,22:23:56.82:1065,57,0	0/0:13,0:13:39.13:0,39,1036	0/0:8,0:8:18.06:0,18,493	0/0:21,0:21:59.97:0,60,1546	0/0:12,0:12:36.12:0,36,984	0/0:18,0:18:54.19:0,54,1478	0/0:14,0:14:39.13:0,39,1021	0/0:10,0:10:30.10:0,30,822	1/1:1,21:22:60.21:1162,60,0	0/0:16,0:16:48.16:0,48,1309	1/1:1,18:19:48.16:926,48,0	1/1:2,17:19:42.14:814,42,0	0/0:18,0:18:51.17:0,51,1327	0/0:16,0:16:48.16:0,48,1314	1/1:3,15:18:45.14:838,45,0	1/1:1,17:18:42.14:796,42,0	0/0:10,0:10:27.09:0,27,739	0/0:10,0:10:30.10:0,30,815	1/1:0,17:17:51.13:950,51,0	1/1:0,20:20:48.08:854,48,0	1/1:0,21:21:54.18:1028,54,0	0/0:12,0:12:33.11:0,33,746	1/1:3,21:24:60.21:1162,60,0	0/0:8,0:8:15.05:0,15,384
chr10	88329853	.	GC	G	1885.65	PASS	AB=0.524;AC=7;AF=0.125;AN=56;BaseQRankSum=2.764;DP=487;FS=13.434;HRun=3;HaplotypeScore=90.4300;InbreedingCoeff=0.8512;MQ=78.31;MQ0=0;MQRankSum=-1.117;QD=31.43;ReadPosRankSum=-0.855;VQSLOD=1.9709;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.24:0,81,1138	0/0:12,0:12:36.12:0,36,516	0/0:14,0:14:27.66:0,28,437	0/0:14,0:14:39.01:0,39,510	0/0:22,0:22:63.21:0,63,906	0/0:10,0:10:30.10:0,30,432	0/0:9,0:9:27.09:0,27,389	1/1:0,25:25:75.22:915,75,0	0/0:11,0:11:33.11:0,33,475	0/0:17,0:17:48.16:0,48,689	0/0:17,0:17:51.17:0,51,733	0/0:12,0:12:36.12:0,36,517	0/0:28,0:28:81.21:0,81,1121	0/0:18,0:18:48.16:0,48,690	0/0:19,0:19:54.17:0,54,759	0/0:24,0:24:54.17:0,54,760	0/0:21,0:21:60.20:0,60,864	0/0:22,0:22:63.21:0,63,902	0/0:17,0:17:45.13:0,45,611	0/0:20,0:20:60.20:0,60,864	1/1:0,10:10:24.08:298,24,0	0/0:10,0:10:30.10:0,30,432	0/0:15,0:15:42.13:0,42,586	0/0:29,0:29:72.16:0,72,989	0/0:20,0:20:54.18:0,54,777	0/1:1,10:11:10.09:339,0,10	0/0:19,0:19:51.17:0,51,732	1/1:1,13:14:39.12:483,39,0
chr10	88330169	.	TTGTTCCA	T	4585.97	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.092;DP=683;FS=7.492;HRun=0;HaplotypeScore=185.0862;InbreedingCoeff=0.9993;MQ=86.67;MQ0=0;MQRankSum=-8.067;QD=53.95;ReadPosRankSum=-1.812;VQSLOD=3.9582;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,4832	0/0:15,0:15:42.14:0,42,1504	0/0:26,0:26:72.25:0,72,2500	0/0:22,0:22:62.42:0,62,2262	0/0:39,0:39:99:0,108,4087	0/0:26,0:26:75.24:0,75,2882	0/0:18,0:18:54.19:0,54,2099	1/1:7,28:35:84.25:1915,84,0	0/0:22,0:22:66.21:0,66,2495	0/0:28,0:28:84.29:0,84,3172	0/0:23,0:23:69.24:0,69,2577	0/0:23,0:23:69.24:0,69,2750	0/0:22,0:22:60.21:0,60,2263	0/0:27,0:27:81.28:0,81,3214	0/0:23,0:23:60.21:0,60,2400	0/0:26,0:26:72.25:0,72,2859	0/0:19,0:19:57.20:0,57,2274	0/0:24,0:24:72.25:0,72,2602	0/0:18,0:18:54.18:0,54,1983	0/0:34,0:34:93.31:0,93,3508	1/1:4,14:18:27.09:657,27,0	0/0:23,0:23:69.24:0,69,2720	0/0:24,0:24:66.23:0,66,2546	0/0:28,0:28:81.28:0,81,3200	0/0:18,0:18:54.19:0,54,2145	1/1:1,18:19:26.32:1157,26,0	0/0:29,0:29:84.29:0,84,3331	1/1:0,13:13:33.11:857,33,0
chr10	88330245	.	CA	C	11154.11	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=17.840;DP=758;FS=0.275;HRun=1;HaplotypeScore=97.5989;InbreedingCoeff=0.9988;MQ=86.43;MQ0=0;MQRankSum=-3.231;QD=39.28;ReadPosRankSum=5.149;VQSLOD=4.8948;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,153,2420	0/0:17,0:17:51.17:0,51,815	0/0:26,0:26:78.12:0,78,1179	0/0:33,0:33:96.32:0,96,1492	1/1:0,31:31:90.30:1258,90,0	0/0:32,0:32:96.30:0,96,1488	0/0:24,0:24:72.25:0,72,1142	0/0:31,0:31:93.32:0,93,1486	0/0:21,0:21:63.20:0,63,983	0/0:36,0:35:99:0,108,1698	0/0:16,0:16:48.12:0,48,739	0/0:27,0:27:81.26:0,81,1270	1/1:0,23:23:66.22:923,66,0	0/0:31,0:31:93.29:0,93,1437	1/1:0,34:34:90.30:1259,90,0	1/1:1,24:25:21.29:875,21,0	0/0:29,0:29:87.30:0,87,1391	0/0:13,0:13:39.13:0,39,624	1/1:0,14:14:42.14:588,42,0	1/1:0,33:33:90.30:1259,90,0	0/0:29,0:29:66.22:0,66,1050	0/0:26,0:26:78.23:0,78,1199	1/1:0,31:31:90.30:1259,90,0	1/1:0,34:34:99:1385,99,0	1/1:0,23:23:66.22:923,66,0	0/0:24,0:24:69.24:0,69,1103	1/1:0,36:36:99:1426,102,0	0/0:7,0:7:21.07:0,21,336
chr10	88332697	.	T	TA	18849.35	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-16.119;DP=708;FS=0.655;HRun=4;HaplotypeScore=62.4523;InbreedingCoeff=0.9955;MQ=88.52;MQ0=0;MQRankSum=-5.133;QD=36.46;ReadPosRankSum=3.758;VQSLOD=4.9071;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,1145	0/0:5,0:5:15.04:0,15,170	0/0:26,0:26:72.20:0,72,817	0/0:24,0:24:68.80:0,69,727	1/1:2,19:21:54.05:675,54,0	1/1:1,26:27:72.24:985,72,0	1/1:1,30:31:81.27:1108,81,0	1/1:1,25:26:75.24:1010,75,0	1/1:2,29:31:84.28:1149,84,0	0/0:36,0:36:99:0,105,1180	0/0:15,0:15:42.11:0,42,466	1/1:4,30:34:87.29:1186,87,0	1/1:1,36:37:99:1436,105,0	1/1:1,25:27:78.25:1055,78,0	1/1:1,35:36:96.32:1313,96,0	1/1:0,27:27:81.27:1108,81,0	0/0:48,0:48:99:0,129,1452	1/1:1,25:26:69.23:943,69,0	1/1:0,18:18:54.17:723,54,0	1/1:5,8:13:21.02:265,21,0	1/1:1,23:24:66.22:901,66,0	1/1:1,13:14:36.12:493,36,0	1/1:0,23:23:55.06:740,55,0	1/1:1,29:30:84.28:1149,84,0	1/1:1,11:12:33.11:452,33,0	1/1:3,28:31:81.25:1091,81,0	1/1:1,21:22:57.19:780,57,0	1/1:0,7:7:21.07:287,21,0
chr10	88332999	.	A	AG	1137.29	PASS	AB=1.000;AC=29;AF=0.537;AN=54;BaseQRankSum=1.865;DP=197;FS=0.000;HRun=6;HaplotypeScore=37.1284;InbreedingCoeff=0.6838;MQ=73.75;MQ0=6;MQRankSum=0.315;QD=16.48;ReadPosRankSum=-0.451;VQSLOD=2.3975;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:18.04:0,18,183	0/0:1,0:1:3.01:0,3,31	0/0:38,0:10:11.50:0,11,109	0/0:39,0:19:27.96:0,28,244	1/1:2,0:2:3.01:37,3,0	0/0:6,0:6:15.03:0,15,153	0/0:4,0:4:8.69:0,9,91	1/1:4,1:5:5.05:44,5,0	1/1:1,0:1:3.01:37,3,0	0/0:6,0:6:15.03:0,15,153	0/0:4,0:4:5.93:0,6,61	0/0:8,0:8:12.02:0,12,122	1/1:1,3:4:9.03:113,9,0	0/0:1,0:1:3.01:0,3,31	1/1:3,4:7:9.03:113,9,0	1/1:4,1:4:9:87,9,0	0/0:6,0:6:9.01:0,9,92	0/0:6,0:6:8.98:0,9,81	1/1:4,2:6:9.03:111,9,0	1/1:0,2:2:6.02:75,6,0	1/1:2,7:10:12.03:151,12,0	0/1:3,0:3:0:0,0,0	1/1:0,9:9:21.07:264,21,0	1/1:1,6:7:9.03:113,9,0	1/1:1,1:2:3.01:38,3,0	1/1:3,1:4:9.03:113,9,0	1/1:2,0:2:3:25,3,0	./.
chr10	88333016	.	GC	G	905.26	PASS	AB=0.816;AC=36;AF=0.857;AN=42;BaseQRankSum=-3.491;DP=69;FS=2.851;HRun=1;HaplotypeScore=21.9069;InbreedingCoeff=-0.1102;MQ=87.92;MQ0=0;MQRankSum=-0.197;QD=15.88;ReadPosRankSum=-3.205;VQSLOD=2.4282;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:2,1:3:2.74:21,0,3	1/1:1,0:1:3:25,3,0	0/0:8,2:4:2.36:0,2,14	0/1:15,1:10:46.35:46,0,148	./.	1/1:0,3:3:6.02:79,6,0	1/1:0,1:1:3.01:42,3,0	1/1:0,2:2:6.02:77,6,0	./.	1/1:0,4:4:9.03:117,9,0	0/1:2,0:2:7.55:19,0,8	0/1:1,3:4:12.58:32,0,13	./.	1/1:1,0:1:3:26,3,0	1/1:1,0:1:3:25,3,0	./.	1/1:0,2:2:3.01:37,3,0	1/1:0,1:1:3.01:40,3,0	1/1:0,2:2:3.01:36,3,0	1/1:0,1:1:3.01:37,3,0	1/1:2,3:5:9.02:101,9,0	./.	1/1:0,3:3:9.03:111,9,0	1/1:1,1:2:6.01:62,6,0	1/1:0,1:1:3.01:37,3,0	1/1:0,1:1:3.01:38,3,0	./.	./.
chr10	88333590	.	CTCTATCTATCTATCTATCTA	C	5808.10	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=7.978;DP=379;FS=11.126;HRun=0;HaplotypeScore=176.8108;InbreedingCoeff=0.8058;MQ=59.42;MQ0=5;MQRankSum=-6.299;QD=40.62;ReadPosRankSum=0.793;VQSLOD=3.4082;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:62.95:0,63,4798	0/0:2,0:8:21.07:0,21,1815	0/0:8,0:6:9.02:0,9,228	0/0:16,0:10:6.02:0,6,306	1/1:9,10:19:12.04:389,12,0	0/0:3,0:8:3.85:0,4,10	0/0:4,0:6:6.91:0,7,128	0/0:36,0:33:54.17:0,54,2170	1/1:3,0:18:15.05:609,15,0	0/0:22,0:22:57.20:0,57,4510	0/0:16,0:16:42.14:0,42,3358	0/0:5,0:5:5.38:0,5,156	1/1:3,12:15:6.02:261,6,0	0/0:2,0:16:17.09:0,17,86	1/1:0,10:10:15.05:623,15,0	1/1:2,11:12:15.05:564,15,0	0/0:13,0:13:27.09:0,27,2194	0/0:9,0:19:18.03:0,18,432	1/1:5,9:14:27.09:950,27,0	1/1:0,5:5:9.03:297,9,0	0/0:6,0:6:12.04:0,12,908	0/0:3,0:9:5.58:0,6,26	./.	1/1:4,9:13:0.47:1,0,0	1/1:4,16:20:30.10:1307,30,0	0/0:14,0:14:42.14:0,42,3514	1/1:4,12:16:15.05:806,15,0	0/0:3,0:3:3.01:0,3,281
chr10	88333608	.	CTA	C	1148.06	PASS	AB=0.954;AC=18;AF=0.321;AN=56;BaseQRankSum=11.473;DP=380;FS=8.910;HRun=0;HaplotypeScore=91.8936;InbreedingCoeff=0.4214;MQ=51.90;MQ0=6;MQRankSum=-9.591;QD=7.60;ReadPosRankSum=3.589;VQSLOD=2.1103;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:87.13:0,87,1462	0/0:10,0:10:27.09:0,27,397	0/0:12,0:8:21.07:0,21,292	0/0:13,0:7:18.06:0,18,255	0/1:19,0:19:9.09:119,0,9	1/1:8,0:7:5.19:20,5,0	0/0:6,0:6:1.77:0,2,118	0/0:36,0:33:94.79:0,95,1353	1/1:16,0:16:13.86:65,14,0	0/0:22,0:22:66.22:0,66,1152	0/0:14,0:14:42.14:0,42,781	0/0:13,0:13:26.30:0,26,346	1/1:13,1:14:5.89:60,6,0	0/1:15,0:16:17.92:57,0,18	1/1:10,0:10:14.78:163,15,0	0/1:12,1:12:5.03:176,0,5	0/0:12,0:12:33.09:0,33,586	0/0:17,0:17:16.59:0,17,307	1/1:9,0:9:4.13:245,4,0	0/1:5,1:6:9.09:49,0,9	0/0:9,0:9:18.06:0,18,332	0/1:8,0:8:26.38:26,0,30	0/0:0,2:2:0:0,0,0	0/0:11,0:11:0:0,0,0	1/1:18,0:18:6.52:274,7,0	0/0:15,0:15:45.15:0,45,809	0/1:14,0:14:1.50:64,0,2	0/0:1,0:1:3.01:0,3,58
chr10	88334037	.	TGGG	T	5927.48	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-5.402;DP=524;FS=9.725;HRun=10;HaplotypeScore=128.3617;InbreedingCoeff=0.9664;MQ=69.76;MQ0=0;MQRankSum=-4.625;QD=31.03;ReadPosRankSum=2.105;VQSLOD=2.8597;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:78.22:0,78,1541	0/0:6,0:6:5.99:0,6,49	0/0:16,0:15:25.03:0,25,455	0/0:6,0:7:15.48:0,15,175	1/1:2,17:19:32.92:442,33,0	0/0:3,0:15:27.64:0,28,98	0/0:0,0:30:56.41:0,56,173	0/0:8,0:24:26.34:0,26,93	0/0:14,0:14:33.11:0,33,684	0/0:8,0:10:27.05:0,27,481	0/0:17,0:17:39.10:0,39,699	0/0:3,0:25:49.54:0,50,171	1/1:1,20:21:50.84:694,51,0	0/0:0,0:15:29.24:0,29,93	1/1:1,17:18:48.16:650,48,0	1/1:2,25:27:63.21:859,63,0	0/0:18,0:18:45.13:0,45,844	0/0:3,0:26:49.83:0,50,185	1/1:3,11:14:33.10:450,33,0	1/1:5,10:15:27.06:364,27,0	0/0:2,0:30:28.66:0,29,64	0/0:1,0:20:40.22:0,40,144	1/1:5,20:25:63.12:832,63,0	1/1:2,24:26:60.19:819,60,0	1/1:2,12:14:24.07:327,24,0	0/0:4,0:23:28.53:0,29,76	1/1:0,12:12:36.12:491,36,0	0/0:0,0:5:6.23:0,6,14
chr10	88334348	.	G	GA	1431.15	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-8.947;DP=452;FS=13.599;HRun=9;HaplotypeScore=47.3107;InbreedingCoeff=0.9403;MQ=72.43;MQ0=0;MQRankSum=-0.914;QD=23.46;ReadPosRankSum=-1.352;VQSLOD=2.8279;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:53.97:0,54,465	0/0:7,0:7:21:0,21,182	0/0:19,0:16:19.04:0,19,158	0/0:18,0:15:4.01:0,4,171	0/0:21,0:21:44.95:0,45,386	0/0:21,0:21:62.96:0,63,540	0/0:16,0:16:38.91:0,39,323	1/1:2,15:17:42.57:457,43,0	0/0:13,0:13:26.99:0,27,234	0/0:14,0:14:32.99:0,33,286	0/0:15,0:15:38.99:0,39,338	0/0:14,0:14:35.95:0,36,305	0/0:19,0:19:50.99:0,51,441	0/0:12,0:12:20.96:0,21,174	0/0:20,0:20:44.97:0,45,390	0/0:13,0:13:35.99:0,36,312	0/0:38,0:38:99:0,108,925	0/0:14,0:14:41.99:0,42,364	0/0:17,0:18:47.02:0,47,396	0/0:16,0:16:47.94:0,48,407	1/1:2,8:9:18.05:199,18,0	0/0:7,0:7:18:0,18,156	0/0:14,0:14:41.83:0,42,351	0/0:11,0:11:29.99:0,30,260	0/0:3,0:12:14.26:0,14,42	1/1:4,19:24:14.12:600,14,0	0/0:18,0:18:44.98:0,45,390	1/1:0,10:10:30.08:332,30,0
chr10	88334387	.	GA	G	229.99	PASS	AB=0.900;AC=4;AF=0.071;AN=56;BaseQRankSum=3.365;DP=418;FS=0.878;HRun=10;HaplotypeScore=44.7373;InbreedingCoeff=0.4216;MQ=69.20;MQ0=2;MQRankSum=1.406;QD=9.20;ReadPosRankSum=1.276;VQSLOD=1.5185;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:54.10:0,54,570	0/0:9,0:9:24.05:0,24,257	0/0:18,0:12:18:0,18,164	0/0:15,0:8:5.77:0,6,52	0/0:15,0:15:39.08:0,39,415	0/0:27,0:28:72.02:0,72,770	0/0:10,0:10:21.05:0,21,224	0/0:22,0:23:53.64:0,54,548	1/1:0,13:13:35.99:312,36,0	0/0:14,0:14:27.07:0,27,293	0/0:16,0:16:41.94:0,42,438	0/0:10,0:10:30.07:0,30,324	0/0:14,0:14:20.16:0,20,402	0/0:8,0:8:21.03:0,21,216	0/0:15,0:15:39.11:0,39,431	0/0:11,0:11:21.06:0,21,232	0/0:36,1:37:67.15:0,67,941	0/0:13,2:15:13.03:0,13,363	0/0:21,0:21:42.09:0,42,450	0/0:15,1:16:22.06:0,22,462	0/0:11,0:11:26.97:0,27,281	0/0:6,0:6:15.04:0,15,166	0/0:16,0:16:42.09:0,42,450	0/1:3,1:4:17.03:17,0,57	0/1:8,0:8:13.66:14,0,88	0/0:14,0:14:29.12:0,29,349	0/0:14,0:15:38.90:0,39,394	0/0:14,0:14:36.07:0,36,387
chr10	88334493	.	C	CT	2498	PASS	AB=0.831;AC=24;AF=0.429;AN=56;BaseQRankSum=-4.393;DP=447;FS=0.453;HRun=12;HaplotypeScore=54.9054;InbreedingCoeff=0.4218;MQ=70.82;MQ0=10;MQRankSum=0.038;QD=10.20;ReadPosRankSum=-0.839;VQSLOD=2.4571;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:41.37:0,41,458	0/0:10,0:10:26.82:0,27,197	0/1:21,0:7:7.99:8,0,13	0/1:36,1:15:14.26:14,0,38	1/1:11,15:26:3.19:342,3,0	0/1:13,1:14:5.35:5,0,129	0/0:10,0:11:28.56:0,29,190	0/0:25,0:26:30.45:0,30,295	1/1:4,1:8:20.51:141,21,0	0/0:17,0:17:32.77:0,33,238	0/0:16,0:16:32.73:0,33,238	0/0:10,0:11:30.89:0,31,205	0/1:4,6:10:0.85:154,0,1	0/0:10,0:10:23.85:0,24,174	1/1:0,5:5:6.01:58,6,0	1/1:3,7:11:23.87:218,24,0	0/0:28,0:28:59.55:0,60,436	0/0:12,0:13:25.78:0,26,173	1/1:7,14:22:44.72:396,45,0	0/1:3,13:16:4.80:270,0,5	0/0:6,0:6:5.96:0,6,44	0/1:6,1:7:11.28:11,0,92	0/1:5,4:9:14.51:136,0,15	1/1:0,9:9:24.04:234,24,0	1/1:5,16:21:1.32:336,1,0	0/0:20,0:20:53.60:0,54,388	1/1:9,11:20:19.30:351,19,0	0/1:7,0:7:11.01:11,0,39
chr10	88334517	.	TAA	T	2056.97	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.641;DP=454;FS=0.000;HRun=2;HaplotypeScore=61.8998;InbreedingCoeff=0.8889;MQ=73.82;MQ0=9;MQRankSum=1.229;QD=38.81;ReadPosRankSum=-1.732;VQSLOD=3.1305;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1688	0/0:12,0:12:36.12:0,36,602	0/0:32,0:12:31.35:0,31,491	0/0:39,0:17:38.05:0,38,449	0/0:21,0:21:60.19:0,60,991	0/0:14,0:14:42.14:0,42,717	0/0:14,0:14:39.12:0,39,666	1/1:1,22:23:69.23:1070,69,0	0/0:14,0:14:39.03:0,39,605	0/0:14,0:14:42.14:0,42,724	0/0:17,0:17:51.17:0,51,880	0/0:9,0:9:27.08:0,27,427	0/0:9,0:9:26.10:0,26,389	0/0:10,0:10:30.10:0,30,506	0/0:8,0:8:18.06:0,18,303	0/0:9,0:9:26.12:0,26,420	0/0:24,0:24:72.23:0,72,1222	0/0:15,0:15:45.09:0,45,676	0/0:22,0:22:50.72:0,51,1031	0/0:20,0:20:57.19:0,57,970	1/1:0,2:2:3.01:49,3,0	0/0:8,0:8:24.08:0,24,410	0/0:7,0:7:4.32:0,4,292	0/0:7,0:7:21.05:0,21,336	0/0:23,0:23:66.19:0,66,1082	1/1:0,20:20:60.20:940,60,0	0/0:19,0:19:56.83:0,57,884	1/1:0,8:8:9.03:145,9,0
chr10	88334976	.	C	CAT	4027.39	PASS	AB=0.804;AC=10;AF=0.179;AN=56;BaseQRankSum=1.875;DP=609;FS=15.759;HRun=0;HaplotypeScore=113.1833;InbreedingCoeff=0.7562;MQ=67.30;MQ0=5;MQRankSum=-2.184;QD=30.98;ReadPosRankSum=-4.211;VQSLOD=3.0779;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:73.97:0,74,1062	0/0:10,0:9:24.04:0,24,314	0/0:10,0:10:23.21:0,23,323	0/0:10,0:11:20.63:0,21,267	0/0:22,0:24:62.46:0,62,817	0/0:12,0:23:24.60:0,25,203	0/0:14,0:24:37.03:0,37,349	1/1:9,31:40:99:1607,114,0	0/1:18,0:18:40.73:41,0,50	0/0:19,0:18:54.15:0,54,806	0/0:16,0:15:42.03:0,42,571	0/0:6,0:18:38.33:0,38,195	0/0:23,0:24:65.79:0,66,879	0/0:9,0:21:47.19:0,47,292	0/0:19,0:21:50.74:0,51,649	0/0:29,0:30:83.86:0,84,1173	0/0:20,0:22:62.24:0,62,845	0/1:5,0:14:15.12:15,0,99	0/0:24,0:25:75.19:0,75,1028	0/0:24,0:25:72.03:0,72,904	1/1:7,11:19:47.97:716,48,0	0/0:13,0:28:63.32:0,63,337	0/0:27,0:27:75.09:0,75,1045	0/0:21,0:21:60.14:0,60,873	0/0:27,0:28:78.20:0,78,1135	1/1:4,25:28:31.74:1232,32,0	0/0:15,0:16:44.77:0,45,613	1/1:0,7:9:21.07:416,21,0
chr10	88335067	.	A	AT	8312.39	PASS	AB=0.607;AC=31;AF=0.554;AN=56;BaseQRankSum=0.478;DP=607;FS=18.104;HRun=10;HaplotypeScore=84.0291;InbreedingCoeff=0.8684;MQ=60.98;MQ0=15;MQRankSum=-0.453;QD=21.53;ReadPosRankSum=0.920;VQSLOD=3.9404;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:64.94:0,65,523	0/0:9,0:9:26.97:0,27,221	0/0:14,0:11:7:0,7,151	0/0:9,0:8:4.07:0,4,28	1/1:6,21:27:29.29:489,29,0	1/1:6,18:23:4.85:462,5,0	1/1:6,12:16:11.45:327,11,0	0/0:36,2:36:12.64:0,13,504	0/0:1,0:13:24.44:0,24,72	0/0:13,0:13:32.94:0,33,269	0/0:15,0:13:35.96:0,36,296	1/1:2,27:29:41.61:647,42,0	1/1:3,19:21:44.90:479,45,0	1/1:5,23:28:60.15:639,60,0	1/1:4,25:29:62.96:671,63,0	1/1:5,13:17:14.45:358,14,0	0/0:19,0:20:52.93:0,53,420	1/1:2,14:15:33.08:352,33,0	0/1:6,11:16:13.20:284,0,13	1/1:4,20:23:60.01:593,60,0	0/0:21,0:22:46.95:0,47,375	1/1:9,21:27:26.29:457,26,0	1/1:3,20:24:61.23:613,61,0	1/1:3,24:27:69.17:736,69,0	1/1:4,17:21:29.50:518,29,0	0/0:26,1:26:35.99:0,36,489	1/1:5,26:30:26.10:686,26,0	0/0:13,0:13:26.96:0,27,222
chr10	88335975	.	G	GTAAA	5261.90	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=11.630;DP=416;FS=4.884;HRun=0;HaplotypeScore=132.9552;InbreedingCoeff=0.9748;MQ=96.64;MQ0=0;MQRankSum=-11.969;QD=35.55;ReadPosRankSum=1.495;VQSLOD=4.9812;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,1934	0/0:8,0:8:18.06:0,18,327	0/0:18,0:18:54.15:0,54,911	0/0:28,0:28:69.23:0,69,1183	1/1:6,5:11:18.06:358,18,0	0/0:26,0:26:72.22:0,72,1250	0/0:20,0:20:60.21:0,60,1090	1/1:26,0:26:36.11:623,36,0	0/0:13,0:13:33.10:0,33,570	0/0:17,0:17:48.16:0,48,846	0/0:17,0:17:42.07:0,42,669	0/0:11,0:11:33.11:0,33,590	1/1:2,5:7:15.05:317,15,0	0/0:9,0:9:27.08:0,27,461	1/1:4,10:15:33.07:657,33,0	1/1:3,6:9:21.06:410,21,0	0/0:21,0:21:57.20:0,57,1037	0/0:20,0:20:57.20:0,57,1027	1/1:1,6:7:21.07:504,21,0	1/1:4,5:9:18.02:338,18,0	1/1:11,0:11:11.97:167,12,0	0/0:21,0:21:57.14:0,57,972	1/1:2,5:7:12.04:245,12,0	1/1:6,4:10:15.04:267,15,0	1/1:3,4:7:12.04:252,12,0	1/1:10,0:10:18.06:327,18,0	1/1:6,7:14:24.04:503,24,0	1/1:5,0:5:15.05:292,15,0
chr10	88335983	.	ACTTCTCCCCGCT	A	8023.90	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=13.548;DP=358;FS=5.951;HRun=0;HaplotypeScore=173.1754;InbreedingCoeff=0.9519;MQ=103.50;MQ0=0;MQRankSum=-13.015;QD=90.16;ReadPosRankSum=4.948;VQSLOD=4.4591;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,7772	0/0:6,0:6:18.06:0,18,1066	0/0:19,0:19:57.18:0,57,2979	0/0:28,0:28:81.08:0,81,3761	1/1:6,0:6:18.06:588,18,0	0/0:23,0:23:66.23:0,66,4198	0/0:23,0:23:69.24:0,69,3961	1/1:0,10:10:30.10:1039,30,0	0/0:12,0:12:36.12:0,36,1879	0/0:16,0:16:48.16:0,48,2662	0/0:15,0:15:42.14:0,42,2284	0/0:12,0:12:36.12:0,36,2159	1/1:5,0:5:15.05:495,15,0	0/0:11,0:11:33.11:0,33,2002	1/1:11,0:11:30.10:993,30,0	1/1:6,0:6:18.06:598,18,0	0/0:21,0:21:63.22:0,63,3887	0/0:21,0:21:63.22:0,63,3877	1/1:8,0:8:21.07:644,21,0	1/1:6,0:6:15.05:498,15,0	1/1:0,5:5:9.03:300,9,0	0/0:21,0:21:63.22:0,63,3588	1/1:5,0:5:12.04:394,12,0	1/1:4,0:4:12.04:392,12,0	1/1:4,0:4:12.04:398,12,0	1/1:0,6:6:18.06:621,18,0	1/1:8,0:8:5.45:584,5,0	1/1:0,5:5:15.05:480,15,0
chr10	88335985	.	TTCTCCCCGCTTCGCA	T	9296.86	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=13.571;DP=355;FS=5.942;HRun=0;HaplotypeScore=189.5005;InbreedingCoeff=0.9672;MQ=104.70;MQ0=0;MQRankSum=-12.412;QD=110.68;ReadPosRankSum=4.799;VQSLOD=3.8074;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,8856	0/0:7,0:7:21.07:0,21,1381	0/0:21,0:21:63.20:0,63,3422	0/0:27,0:27:75.20:0,75,3971	1/1:0,6:6:18.06:726,18,0	0/0:23,0:23:66.23:0,66,4908	0/0:22,0:22:66.23:0,66,4554	1/1:10,0:10:30.10:941,30,0	0/0:12,0:12:36.12:0,36,1925	0/0:15,0:15:45.15:0,45,3202	0/0:15,0:15:42.06:0,42,2385	0/0:12,0:12:36.12:0,36,2556	1/1:0,5:5:15.05:624,15,0	0/0:11,0:11:33.11:0,33,2226	1/1:0,10:10:30.10:1250,30,0	1/1:0,6:6:18.06:752,18,0	0/0:22,0:22:66.23:0,66,4786	0/0:21,0:21:63.21:0,63,4631	1/1:0,7:7:21.07:866,21,0	1/1:0,5:5:15.05:623,15,0	1/1:5,0:5:9.02:269,9,0	0/0:22,0:22:66.22:0,66,4192	1/1:1,4:5:12.04:490,12,0	1/1:0,4:4:12.04:485,12,0	1/1:0,4:4:12.04:497,12,0	1/1:6,0:6:18.06:555,18,0	1/1:0,6:6:18.06:789,18,0	1/1:5,0:5:15.05:428,15,0
chr10	88335998	.	G	GA	2683.30	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=14.321;DP=369;FS=3.209;HRun=0;HaplotypeScore=124.1630;InbreedingCoeff=0.9712;MQ=96.15;MQ0=0;MQRankSum=-13.331;QD=25.80;ReadPosRankSum=2.117;VQSLOD=4.0361;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,1801	0/0:6,0:6:18.06:0,18,251	0/0:17,0:17:47.87:0,48,661	0/0:24,0:24:17.85:0,18,715	1/1:6,0:6:18.01:162,18,0	0/0:24,0:24:72.23:0,72,986	0/0:21,0:21:60.20:0,60,837	1/1:11,10:21:61.32:656,61,0	0/0:9,0:9:27.08:0,27,360	0/0:16,0:16:48.15:0,48,655	0/0:11,0:11:27.09:0,27,375	0/0:12,0:12:36.12:0,36,503	1/1:6,0:6:15.01:140,15,0	0/0:10,0:10:30.09:0,30,399	1/1:10,0:10:30.04:285,30,0	1/1:6,0:6:18.02:173,18,0	0/0:26,0:26:78.26:0,78,1086	0/0:21,0:21:63.19:0,63,863	1/1:7,0:7:21.04:216,21,0	1/1:5,0:5:15.02:143,15,0	1/1:3,6:9:15.03:154,15,0	0/0:22,0:22:57.19:0,57,794	1/1:4,0:4:12.01:110,12,0	1/1:4,0:4:12.01:108,12,0	1/1:4,0:4:12.02:114,12,0	1/1:5,6:11:33.05:349,33,0	1/1:6,0:6:18.02:174,18,0	1/1:0,5:5:13.58:128,14,0
chr10	88336928	.	TG	T	3172.36	PASS	AB=0.520;AC=7;AF=0.125;AN=56;BaseQRankSum=4.681;DP=607;FS=5.755;HRun=5;HaplotypeScore=68.7444;InbreedingCoeff=0.8793;MQ=80.85;MQ0=0;MQRankSum=2.040;QD=28.32;ReadPosRankSum=0.050;VQSLOD=3.8535;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1518	0/0:9,0:9:27.09:0,27,369	0/0:14,0:14:42.05:0,42,502	0/0:29,0:29:77.92:0,78,1004	0/0:19,0:19:48.14:0,48,638	0/0:17,0:17:42.10:0,42,553	0/0:39,0:39:99:0,102,1336	1/1:4,36:40:99:1113,99,0	0/0:18,0:18:48.16:0,48,656	0/0:15,0:15:45.15:0,45,616	0/0:14,0:14:42.11:0,42,553	0/0:25,0:25:69.23:0,69,943	0/0:25,0:25:69.22:0,69,926	0/0:20,0:20:57.17:0,57,757	0/0:26,0:26:60.16:0,60,800	0/0:25,0:25:66.22:0,66,897	0/0:21,0:21:51.17:0,51,697	0/0:10,0:10:30.08:0,30,392	0/0:21,0:21:63.21:0,63,862	0/0:15,0:15:45.14:0,45,599	1/1:0,40:40:99:1259,111,0	0/0:15,0:15:42.14:0,42,568	0/0:12,0:12:30.10:0,30,410	0/0:36,0:36:81.23:0,81,1087	0/0:12,0:12:36.12:0,36,492	0/1:1,12:13:4.94:338,0,5	0/0:19,0:18:54.16:0,54,720	1/1:0,19:19:54.15:613,54,0
chr10	88337017	.	A	ATGCG	17341.58	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-10.294;DP=533;FS=4.270;HRun=0;HaplotypeScore=103.9055;InbreedingCoeff=0.9877;MQ=82.58;MQ0=2;MQRankSum=-6.950;QD=59.59;ReadPosRankSum=3.011;VQSLOD=6.2742;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:54.18:0,54,995	0/0:8,0:8:21.07:0,21,398	0/0:22,0:22:58.24:0,58,1073	0/0:27,0:23:51.07:0,51,879	1/1:2,11:13:26.37:726,26,0	1/1:4,19:23:48.14:1232,48,0	1/1:7,25:33:72.15:1933,72,0	0/0:29,0:29:78.25:0,78,1385	0/0:21,0:21:54.18:0,54,1005	0/0:18,0:18:48.16:0,48,882	0/0:10,0:10:21.07:0,21,385	1/1:7,15:21:51.16:1270,51,0	1/1:1,12:13:33.11:887,33,0	1/1:4,23:28:65.51:1766,66,0	1/1:2,19:23:48.16:1293,48,0	1/1:2,21:25:57.20:1534,57,0	0/0:14,0:14:27.09:0,27,512	1/1:3,6:9:24.08:646,24,0	1/1:5,13:18:43.80:1195,44,0	1/1:2,6:8:15.05:402,15,0	0/0:23,0:23:57.20:0,57,1063	1/1:1,13:16:26.37:722,26,0	1/1:1,2:3:9.03:240,9,0	1/1:3,24:27:50.80:1373,51,0	1/1:2,12:14:36.12:965,36,0	0/0:31,0:31:87.30:0,87,1642	1/1:1,14:15:45.15:1159,45,0	0/0:15,0:15:42.14:0,42,797
chr10	88337036	.	ATCTCTC	A	411.19	PASS	AB=1.000;AC=23;AF=0.548;AN=42;BaseQRankSum=2.947;DP=476;FS=3.712;HRun=0;HaplotypeScore=148.1892;InbreedingCoeff=0.3665;MQ=69.50;MQ0=11;MQRankSum=-2.537;QD=1.87;ReadPosRankSum=-1.973;VQSLOD=2.5172;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:29:32.17:0,32,566	./.	./.	./.	0/0:10,0:10:0:0,0,0	1/1:20,1:21:6.02:92,6,0	0/0:24,0:24:3.01:0,3,56	./.	1/1:15,2:17:3.01:60,3,0	1/1:17,0:16:3.01:60,3,0	./.	0/0:16,0:14:3.01:0,3,39	1/1:11,1:13:5.76:102,6,0	1/1:22,0:24:1.77:4,2,0	1/1:18,0:19:0.89:2,1,0	1/1:19,0:20:6.02:82,6,0	1/1:10,3:13:3.01:60,3,0	0/0:7,0:7:3.01:0,3,37	0/1:16,0:15:19:49,0,19	1/1:8,1:9:2.97:20,3,0	1/1:22,0:22:0.88:2,1,0	./.	./.	1/1:27,0:27:0.47:1,0,0	0/0:9,0:10:3.01:0,3,32	0/0:26,0:26:15.04:0,15,181	0/0:16,0:18:2.01:0,2,34	0/0:18,0:16:3.01:0,3,39
chr10	88337105	.	C	CCT	2674.58	PASS	AB=0.722;AC=13;AF=0.232;AN=56;BaseQRankSum=5.047;DP=652;FS=4.820;HRun=0;HaplotypeScore=104.5936;InbreedingCoeff=0.8682;MQ=50.54;MQ0=27;MQRankSum=-5.898;QD=30.05;ReadPosRankSum=0.397;VQSLOD=4.9686;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:44.52:0,45,915	0/0:4,0:4:9.03:0,9,114	0/0:110,0:23:10.31:0,10,238	0/0:125,0:18:27.59:0,28,299	0/0:18,0:18:42.56:0,43,517	0/1:8,5:12:8.12:312,0,8	1/1:6,9:15:30.10:488,30,0	0/0:25,0:25:51.14:0,51,624	0/0:18,0:18:45.13:0,45,558	0/0:16,0:15:36.11:0,36,446	0/0:6,0:6:9.03:0,9,114	1/1:6,12:18:42.12:659,42,0	0/0:17,0:17:42.12:0,42,513	1/1:3,14:17:48.14:739,48,0	0/0:21,0:21:48.15:0,48,607	0/0:17,0:17:42.11:0,42,515	0/0:14,0:14:39.12:0,39,492	1/1:2,6:8:17.42:259,17,0	0/0:18,0:18:39.06:0,39,462	0/0:9,0:9:21.02:0,21,247	0/0:25,0:23:47.34:0,47,639	1/1:1,9:10:18.06:299,18,0	0/0:14,0:14:36.10:0,36,444	0/0:39,0:39:89.38:0,89,1102	1/1:3,0:7:11.74:106,12,0	0/0:9,0:9:24.08:0,24,305	0/0:19,0:19:48.15:0,48,609	0/0:4,0:4:12.04:0,12,153
chr10	88337132	.	TTC	T	2898.23	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.741;DP=671;FS=0.467;HRun=0;HaplotypeScore=93.5593;InbreedingCoeff=0.9860;MQ=49.47;MQ0=32;MQRankSum=-3.437;QD=32.93;ReadPosRankSum=-2.127;VQSLOD=5.1595;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:98.70:0,99,1768	0/0:6,0:6:18.06:0,18,329	0/0:113,0:22:44.64:0,45,596	0/0:116,3:20:30.28:0,30,430	0/0:21,0:21:54.19:0,54,990	1/1:3,8:10:29.89:398,30,0	1/1:3,10:13:24.08:335,24,0	0/0:23,0:23:69.23:0,69,1195	0/0:17,0:17:47.82:0,48,880	0/0:15,0:15:45.15:0,45,769	0/0:7,0:7:21.07:0,21,363	1/1:0,19:19:54.18:769,54,0	0/0:17,0:17:51.14:0,51,866	1/1:4,17:21:60.19:829,60,0	0/0:20,0:20:60.21:0,60,1096	0/0:18,0:18:48.16:0,48,871	0/0:21,0:21:50.07:0,50,846	1/1:5,5:10:21.06:283,21,0	0/0:12,0:10:27.08:0,27,456	0/0:10,0:10:24.08:0,24,439	0/0:20,0:20:53.67:0,54,885	1/1:2,12:14:33.11:472,33,0	0/0:16,0:16:48.16:0,48,859	0/0:43,0:43:99:0,111,1935	0/0:7,0:7:15.05:0,15,274	0/0:13,0:13:39.13:0,39,709	0/0:22,0:22:66.23:0,66,1209	0/0:4,0:4:12.04:0,12,220
chr10	88337216	.	C	CCT	3983	PASS	AB=0.902;AC=14;AF=0.250;AN=56;BaseQRankSum=-5.454;DP=714;FS=2.599;HRun=0;HaplotypeScore=92.2361;InbreedingCoeff=0.7639;MQ=55.30;MQ0=34;MQRankSum=0.529;QD=15.62;ReadPosRankSum=1.935;VQSLOD=3.7792;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:66.19:0,66,825	0/0:10,0:10:27.09:0,27,337	0/0:93,0:25:9.60:0,10,255	0/1:128,0:19:31.02:31,0,204	0/0:22,0:22:51.16:0,51,635	1/1:4,12:16:4.67:570,5,0	0/1:10,3:13:53.90:222,0,54	0/0:25,0:24:33.09:0,33,395	0/0:16,0:16:42.09:0,42,507	0/0:14,0:14:42.08:0,42,506	0/0:19,0:19:54.17:0,54,674	1/1:10,9:20:10.22:414,10,0	0/0:14,0:14:30.10:0,30,374	1/1:7,10:17:36.11:568,36,0	0/0:17,0:17:39.12:0,39,487	0/0:17,0:16:42.13:0,42,523	0/0:26,0:26:60.19:0,60,750	1/1:4,18:22:36.39:731,36,0	0/0:11,0:8:21.07:0,21,261	0/0:19,0:19:54.16:0,54,662	0/0:23,0:22:60.19:0,60,749	1/1:7,12:19:45.14:718,45,0	0/0:13,0:13:36.11:0,36,449	0/0:28,0:28:55.23:0,55,639	1/1:7,12:19:47.90:728,48,0	0/0:28,0:28:78.23:0,78,954	0/0:17,0:17:39.10:0,39,469	0/0:17,0:17:44.31:0,44,492
chr10	88337290	.	CCT	C	4167.23	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.660;DP=681;FS=4.907;HRun=0;HaplotypeScore=95.5109;InbreedingCoeff=0.9538;MQ=60.54;MQ0=13;MQRankSum=-0.312;QD=31.33;ReadPosRankSum=2.337;VQSLOD=5.8473;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:65.43:0,65,1063	0/0:5,0:5:15.05:0,15,257	0/0:67,0:23:22.01:0,22,509	0/0:92,1:30:0.86:0,1,346	0/0:20,0:20:51.16:0,51,834	1/1:3,12:15:39.13:508,39,0	1/1:2,20:23:48.16:631,48,0	0/0:25,0:23:54.18:0,54,913	0/0:20,0:20:54.18:0,54,908	0/0:20,0:20:54.18:0,54,910	0/0:22,0:22:54.18:0,54,872	1/1:3,15:18:45.15:590,45,0	0/0:24,0:24:63.21:0,63,1040	1/1:4,13:17:39.13:511,39,0	0/0:24,0:24:69.24:0,69,1170	0/0:17,0:16:48.03:0,48,786	0/0:28,0:28:78.26:0,78,1283	1/1:5,12:17:22.24:489,22,0	0/0:10,0:10:27.09:0,27,462	0/0:19,0:19:51.17:0,51,874	0/0:16,0:16:42.14:0,42,720	1/1:1,23:24:60.19:787,60,0	0/0:19,0:20:46.04:0,46,774	0/0:32,0:31:71.73:0,72,1155	1/1:1,18:19:51.14:652,51,0	0/0:26,0:26:72.23:0,72,1166	0/0:21,0:21:54.66:0,55,926	0/0:11,0:11:33.11:0,33,566
chr10	88337374	.	TTACACACA	T	2547	PASS	AB=0.904;AC=13;AF=0.241;AN=54;BaseQRankSum=8.618;DP=485;FS=2.646;HRun=0;HaplotypeScore=148.9918;InbreedingCoeff=0.7414;MQ=60.09;MQ0=9;MQRankSum=-4.522;QD=20.54;ReadPosRankSum=1.883;VQSLOD=2.9254;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:74.95:0,75,1206	0/0:4,0:8:11.89:0,12,220	0/0:40,0:24:59.98:0,60,533	0/0:54,0:21:41.03:0,41,371	0/0:16,0:15:39.07:0,39,572	1/1:7,2:8:14.66:239,15,0	1/1:10,0:11:9.22:185,9,0	0/0:14,0:13:33:0,33,380	0/0:13,0:13:39.02:0,39,770	0/0:16,0:16:45.96:0,46,987	0/0:15,0:15:39.47:0,39,635	1/1:12,6:19:53.91:831,54,0	0/0:11,0:12:25.85:0,26,282	1/1:0,16:17:15.05:371,15,0	0/1:20,0:20:20.15:20,0,275	0/1:14,0:16:7.13:7,0,414	0/0:20,0:20:53.89:0,54,1015	0/1:11,3:14:0.21:416,0,0	0/0:10,0:10:26.89:0,27,368	0/0:11,0:11:26.44:0,26,243	0/0:14,0:15:42.54:0,43,1326	1/1:13,5:18:47.83:653,48,0	0/0:15,0:15:36.04:0,36,543	0/0:22,0:23:56.59:0,57,690	0/0:17,0:16:36.52:0,37,1030	0/0:16,0:16:45.11:0,45,1140	0/0:16,0:16:29.74:0,30,344	./.
chr10	88337375	.	TACAC	T	1863.04	PASS	AB=0.984;AC=28;AF=0.560;AN=50;BaseQRankSum=4.022;DP=496;FS=0.000;HRun=0;HaplotypeScore=117.8173;InbreedingCoeff=0.5894;MQ=59.83;MQ0=9;MQRankSum=-2.432;QD=7.45;ReadPosRankSum=0.251;VQSLOD=2.2733;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:28:19.78:0,20,153	0/0:9,0:9:5.99:0,6,74	./.	./.	0/1:14,1:14:0.85:42,0,1	1/1:9,0:8:6:52,6,0	1/1:11,0:11:2.98:22,3,0	./.	0/0:13,0:13:12.04:0,12,230	0/0:14,0:18:27.56:0,28,398	0/0:12,0:19:12.04:0,12,199	1/1:19,0:19:21.02:195,21,0	1/1:6,4:11:15.04:213,15,0	1/1:16,0:17:11.52:92,12,0	1/1:16,2:23:30.03:310,30,0	1/1:10,3:15:8.55:238,9,0	0/0:19,0:22:24.08:0,24,419	0/1:15,0:15:21.68:71,0,22	1/1:11,0:11:3:27,3,0	1/1:10,1:12:9.02:121,9,0	0/0:17,0:16:30.10:0,30,624	0/1:17,0:17:0.11:79,0,0	1/1:9,7:15:12.50:188,13,0	1/1:19,4:23:18.06:274,18,0	0/1:19,0:18:27.56:28,0,447	0/0:16,0:17:30.22:0,30,485	1/1:9,7:16:6.02:93,6,0	0/0:2,0:2:6.02:0,6,94
chr10	88339479	.	AAG	A	93.52	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.258;DP=778;FS=1.384;HRun=0;HaplotypeScore=127.0231;InbreedingCoeff=0.9556;MQ=72.15;MQ0=3;MQRankSum=1.146;QD=3.46;ReadPosRankSum=0.579;VQSLOD=2.6050;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:67.13:0,67,1419	0/0:13,0:13:35.99:0,36,525	0/0:42,0:28:25.92:0,26,491	0/0:38,0:23:26.28:0,26,384	0/0:32,0:32:80.53:0,81,426	0/0:17,0:17:41.92:0,42,574	0/0:29,0:29:72.20:0,72,1112	0/0:26,0:26:52.09:0,52,299	1/1:26,1:27:49.79:188,50,0	0/0:34,1:35:49.74:0,50,1243	0/0:39,0:39:99:0,99,1518	0/0:27,0:27:63.20:0,63,1005	0/0:28,0:28:66.06:0,66,342	0/0:23,0:23:63.15:0,63,927	0/0:35,0:35:57.44:0,57,403	0/0:18,0:18:22.52:0,23,210	0/0:36,0:36:90.19:0,90,1323	0/0:33,2:35:51.17:0,51,1269	0/0:19,0:19:43.53:0,44,251	0/0:28,0:28:54.98:0,55,330	0/0:6,0:6:14.50:0,14,85	0/0:23,2:25:16.65:0,17,734	0/0:32,0:32:74.68:0,75,479	0/0:36,0:35:34.38:0,34,361	0/0:23,0:23:16.67:0,17,786	0/0:34,0:34:92.49:0,92,548	0/0:23,0:23:57.62:0,58,307	0/0:18,0:18:28.39:0,28,236
chr10	88339492	.	AG	A	1801.65	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=17.808;DP=769;FS=7.847;HRun=1;HaplotypeScore=105.5238;InbreedingCoeff=0.5666;MQ=65.47;MQ0=15;MQRankSum=2.786;QD=5.16;ReadPosRankSum=3.272;VQSLOD=0.4425;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,100,1347	0/0:13,0:13:32.94:0,33,489	0/0:33,0:20:53.32:0,53,562	0/0:39,1:25:40.05:0,40,475	1/1:30,0:29:15.95:119,16,0	0/0:19,1:20:14.71:0,15,607	0/0:25,0:25:75.13:0,75,989	0/1:22,0:21:17.92:18,0,32	1/1:1,25:26:71.82:955,72,0	0/0:35,0:35:88.74:0,89,1229	0/0:37,0:37:99:0,102,1377	0/0:25,0:25:75.20:0,75,990	1/1:28,0:26:44.30:128,44,0	0/0:23,0:23:66.09:0,66,831	0/1:34,0:33:15.04:76,0,15	1/1:21,0:20:4.06:52,4,0	0/0:37,0:37:99:0,105,1333	0/0:37,0:37:97.72:0,98,1312	0/0:18,0:16:0.29:0,0,52	1/1:31,1:31:17.96:163,18,0	0/1:11,0:10:8.33:21,0,8	0/0:20,0:20:46.69:0,47,707	0/1:32,0:31:65.10:96,0,65	1/1:34,0:31:29.97:145,30,0	0/0:20,0:20:43.67:0,44,716	0/1:34,0:33:33.17:33,0,53	1/1:25,0:21:12.98:72,13,0	1/1:20,0:20:19.77:124,20,0
chr10	88339493	.	GA	G	8251.10	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=11.919;DP=765;FS=25.312;HRun=8;HaplotypeScore=84.7866;InbreedingCoeff=0.9904;MQ=65.50;MQ0=15;MQRankSum=-0.014;QD=22.67;ReadPosRankSum=1.424;VQSLOD=3.4124;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1241	0/0:12,1:13:10.10:0,10,388	0/0:32,0:20:16.35:0,16,357	0/0:39,0:25:37.62:0,38,440	1/1:2,28:29:76.54:751,77,0	0/0:19,1:20:17.35:0,17,536	0/0:24,0:24:66.18:0,66,772	1/1:2,19:20:57.07:544,57,0	1/1:26,0:26:62.27:334,62,0	0/0:35,0:35:94.75:0,95,1095	0/0:37,0:37:93.28:0,93,1118	0/0:26,0:26:75.22:0,75,891	1/1:2,26:26:78.13:753,78,0	0/0:25,0:25:59.90:0,60,676	1/1:5,29:33:80.89:768,81,0	1/1:3,18:20:47.95:450,48,0	0/0:36,0:36:90.24:0,90,1066	0/0:36,0:36:94.20:0,94,1093	1/1:3,14:15:39.05:371,39,0	1/1:4,28:31:75.11:721,75,0	1/1:1,10:10:23.18:229,23,0	0/0:20,0:20:49.69:0,50,572	1/1:5,27:31:66.09:636,66,0	1/1:5,29:31:81:768,81,0	0/0:20,0:20:58.63:0,59,658	1/1:4,30:33:89.34:842,89,0	1/1:4,21:21:57.09:550,57,0	1/1:1,18:19:56.96:536,57,0
chr10	88374605	.	TCACA	T	309.60	PASS	AB=0.806;AC=9;AF=0.180;AN=50;BaseQRankSum=2.849;DP=570;FS=29.259;HRun=0;HaplotypeScore=106.1100;InbreedingCoeff=0.3617;MQ=59.05;MQ0=18;MQRankSum=-2.008;QD=2.17;ReadPosRankSum=-0.386;VQSLOD=0.3719;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:24.05:0,24,401	./.	./.	./.	0/0:10,0:12:8.75:0,9,106	0/0:18,0:20:11.71:0,12,224	0/0:27,0:24:15.02:0,15,196	0/0:24,0:20:0:0,0,0	1/1:15,0:21:6.01:56,6,0	0/0:14,0:14:5.75:0,6,52	0/0:11,0:12:2.74:0,3,12	0/0:14,0:15:13.22:0,13,157	0/0:11,0:13:17.53:0,18,250	0/0:15,0:14:12.02:0,12,140	0/0:17,0:18:12.04:0,12,245	0/1:21,2:25:96.28:96,0,151	0/0:28,0:27:32.34:0,32,512	0/1:24,1:27:15.67:16,0,461	0/0:12,0:13:3.01:0,3,70	0/0:18,0:19:17.80:0,18,354	1/1:32,5:35:3.01:46,3,0	0/0:17,0:16:3.01:0,3,31	0/0:12,0:11:4.50:0,4,103	0/0:33,1:35:47.81:0,48,847	0/0:11,0:10:3.01:0,3,30	1/1:17,1:18:6.02:97,6,0	0/0:19,0:20:23.90:0,24,401	0/1:6,6:15:0.91:126,0,1
chr10	88377119	.	A	AG	123.64	PASS	AB=0.815;AC=10;AF=0.250;AN=40;BaseQRankSum=-1.939;DP=244;FS=2.431;HRun=0;HaplotypeScore=38.2689;InbreedingCoeff=0.0784;MQ=31.10;MQ0=9;MQRankSum=-1.458;QD=1.69;ReadPosRankSum=-0.042;VQSLOD=1.6483;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:17:6.01:0,6,81	0/0:9,0:9:3.01:0,3,41	./.	0/0:3,0:1:3.01:0,3,42	./.	0/0:9,2:10:2.95:0,3,25	1/1:10,0:10:0.46:1,0,0	0/1:6,3:9:99:135,0,111	0/0:2,0:2:3:0,3,25	0/0:11,0:10:23.05:0,23,193	./.	1/1:11,4:14:0.55:1,1,0	0/1:7,0:7:0.02:0,0,0	./.	0/1:4,3:7:0:0,0,0	./.	0/0:6,0:6:5.70:0,6,34	0/0:4,0:4:0.47:0,0,1	0/1:6,2:8:34.43:34,0,63	0/0:10,1:11:5.91:0,6,67	0/0:8,1:8:6.02:0,6,78	0/0:13,4:17:2.93:0,3,39	0/1:8,3:10:0.07:0,0,0	./.	./.	0/1:5,1:6:40.48:40,0,148	0/0:7,0:5:8.99:0,9,103	./.
chr10	88378775	.	T	TA	3839	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-5.896;DP=707;FS=1.274;HRun=6;HaplotypeScore=70.5178;InbreedingCoeff=0.9976;MQ=86.66;MQ0=0;MQRankSum=-2.132;QD=32.53;ReadPosRankSum=-2.087;VQSLOD=3.1012;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.17:0,96,967	0/0:6,0:6:18.04:0,18,184	0/0:27,0:27:75.11:0,75,738	0/0:21,0:21:53.60:0,54,522	0/0:35,0:35:99:0,102,1041	0/0:20,0:20:51.11:0,51,520	0/0:20,0:20:57.09:0,57,566	1/1:6,29:35:81.24:1004,81,0	0/0:27,0:27:66.14:0,66,673	0/0:27,0:27:78.18:0,78,795	0/0:32,0:32:75.14:0,75,758	0/0:20,0:20:51.11:0,51,520	0/0:25,0:25:69.16:0,69,704	0/0:24,0:24:57.10:0,57,574	0/0:19,0:19:54.12:0,54,551	0/0:28,0:28:78.18:0,78,796	0/0:24,0:24:69.16:0,69,704	0/0:18,0:18:36.08:0,36,367	0/0:28,0:28:72.15:0,72,727	0/0:28,0:28:69.13:0,69,697	1/1:2,25:27:75.24:944,75,0	0/0:26,0:26:75.15:0,75,753	0/0:25,0:25:66.10:0,66,657	0/0:15,0:15:33.07:0,33,337	0/0:29,0:29:81.18:0,81,826	1/1:3,31:34:93.28:1157,93,0	0/0:29,0:29:78.16:0,78,790	1/1:2,20:22:60.12:735,60,0
chr10	88378984	.	T	TATCA	2585.03	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.406;DP=621;FS=4.062;HRun=0;HaplotypeScore=105.9028;InbreedingCoeff=0.9963;MQ=77.82;MQ0=0;MQRankSum=-9.364;QD=43.08;ReadPosRankSum=-2.336;VQSLOD=3.3841;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.30:0,96,1661	0/0:14,0:14:39.12:0,39,646	0/0:27,0:27:57.19:0,57,991	0/0:14,0:14:27.06:0,27,447	0/0:30,0:30:66.20:0,66,1128	0/0:18,0:18:30.10:0,30,534	0/0:10,0:10:30.07:0,30,476	1/1:11,8:19:33.11:816,33,0	0/0:22,0:22:51.15:0,51,851	0/0:25,0:25:72.22:0,72,1195	0/0:31,0:31:78.74:0,79,1380	0/0:20,0:20:57.18:0,57,983	0/0:24,0:24:66.23:0,66,1171	0/0:16,0:16:45.14:0,45,772	0/0:20,0:20:57.20:0,57,1012	0/0:28,0:28:72.25:0,72,1277	0/0:26,0:26:78.27:0,78,1379	0/0:10,0:10:24.08:0,24,427	0/0:16,0:16:30.09:0,30,504	0/0:40,0:40:99:0,111,1944	1/1:6,7:13:20.94:364,21,0	0/0:23,0:23:63.20:0,63,1085	0/0:22,0:22:57.19:0,57,1005	0/0:18,0:18:48.13:0,48,786	0/0:34,0:34:87.28:0,87,1502	1/1:7,12:19:42.14:1080,42,0	0/0:39,0:39:96.28:0,96,1613	1/1:2,6:9:21.04:485,21,0
chr10	88379110	.	C	CA	956.71	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.909;DP=526;FS=9.851;HRun=2;HaplotypeScore=63.6765;InbreedingCoeff=0.9625;MQ=79.36;MQ0=0;MQRankSum=-9.305;QD=19.52;ReadPosRankSum=-2.013;VQSLOD=2.1815;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:14.64:0,15,422	0/0:6,0:6:18.06:0,18,223	0/0:17,0:17:42.12:0,42,510	0/0:15,0:14:33.05:0,33,376	0/0:33,0:33:90.28:0,90,1116	0/0:26,0:26:75.19:0,75,890	0/0:10,0:10:30.09:0,30,372	1/1:20,2:22:50.95:455,51,0	0/0:21,0:21:60.19:0,60,743	0/0:34,0:34:99:0,99,1215	0/0:25,0:25:69.22:0,69,855	0/0:14,0:14:42.13:0,42,521	0/0:21,0:21:57.18:0,57,706	0/0:11,0:11:33.10:0,33,409	0/0:19,0:19:57.04:0,57,684	0/0:15,0:15:45.13:0,45,545	0/0:19,0:19:57.16:0,57,691	0/0:16,0:16:42.11:0,42,506	0/0:19,0:19:54.15:0,54,647	0/0:26,0:26:78.23:0,78,953	1/1:5,0:5:6.01:65,6,0	0/0:24,0:24:72.23:0,72,892	0/0:26,0:26:78.25:0,78,965	0/0:14,0:14:39.12:0,39,484	0/0:24,0:24:72.22:0,72,885	1/1:11,2:13:38.99:354,39,0	0/0:27,0:27:81.25:0,81,1001	1/1:9,0:9:27:237,27,0
chr10	88379112	.	AGTTG	A	2308.29	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.904;DP=520;FS=11.085;HRun=0;HaplotypeScore=89.7504;InbreedingCoeff=0.9805;MQ=79.62;MQ0=0;MQRankSum=-9.843;QD=49.11;ReadPosRankSum=-2.143;VQSLOD=3.6652;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:16:30.73:0,31,1124	0/0:6,0:6:18.06:0,18,522	0/0:17,0:17:51.16:0,51,1405	0/0:15,0:14:39.10:0,39,984	0/0:31,0:31:93.32:0,93,2683	0/0:26,0:26:78.27:0,78,2260	0/0:10,0:10:30.10:0,30,832	1/1:7,14:21:51.17:967,51,0	0/0:20,0:20:60.21:0,60,1638	0/0:34,0:34:99:0,102,2916	0/0:24,0:24:72.25:0,72,2049	0/0:14,0:14:42.14:0,42,1218	0/0:21,0:21:63.22:0,63,1791	0/0:11,0:11:33.11:0,33,928	0/0:19,0:19:57.20:0,57,1566	0/0:15,0:15:45.14:0,45,1242	0/0:19,0:19:57.17:0,57,1544	0/0:16,0:16:45.13:0,45,1240	0/0:19,0:19:57.20:0,57,1572	0/0:26,0:26:78.27:0,78,2234	1/1:1,3:4:8.99:136,9,0	0/0:24,0:24:72.25:0,72,2020	0/0:26,0:26:78.27:0,78,2195	0/0:13,0:13:39.13:0,39,1130	0/0:24,0:24:72.25:0,72,2061	1/1:2,11:13:39.13:812,39,0	0/0:27,0:27:81.28:0,81,2253	1/1:1,8:9:27.09:549,27,0
chr10	88379121	.	G	GA	1713.80	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.288;DP=534;FS=15.980;HRun=1;HaplotypeScore=59.8748;InbreedingCoeff=0.9948;MQ=80.31;MQ0=0;MQRankSum=-8.697;QD=31.74;ReadPosRankSum=-3.320;VQSLOD=1.4241;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.14:0,42,544	0/0:6,0:6:18.06:0,18,234	0/0:18,0:18:51.07:0,51,624	0/0:17,0:16:30.11:0,30,453	0/0:33,0:33:99:0,99,1285	0/0:27,0:27:81.24:0,81,1035	0/0:10,0:10:30.08:0,30,375	1/1:3,17:20:48.15:683,48,0	0/0:21,0:21:63.20:0,63,817	0/0:37,0:37:99:0,111,1430	0/0:25,0:25:72.22:0,72,920	0/0:15,0:15:45.13:0,45,570	0/0:22,0:22:63.20:0,63,818	0/0:13,0:13:33.11:0,33,428	0/0:15,0:15:45.15:0,45,584	0/0:16,0:16:42.12:0,42,531	0/0:20,0:20:57.19:0,57,740	0/0:14,0:14:42.14:0,42,545	0/0:16,0:16:48.16:0,48,623	0/0:25,0:25:72.23:0,72,935	1/1:1,6:7:18.06:261,18,0	0/0:24,0:24:72.23:0,72,934	0/0:26,0:26:78.25:0,78,1013	0/0:13,0:13:39.13:0,39,506	0/0:23,0:23:69.21:0,69,882	1/1:2,10:12:36.12:528,36,0	0/0:29,0:29:84.27:0,84,1091	1/1:1,14:15:27.09:402,27,0
chr10	88380116	.	GGGT	G	1573.92	PASS	AB=0.923;AC=9;AF=0.161;AN=56;BaseQRankSum=6.331;DP=522;FS=0.000;HRun=0;HaplotypeScore=74.5843;InbreedingCoeff=0.8783;MQ=69.92;MQ0=3;MQRankSum=-1.893;QD=21.56;ReadPosRankSum=-0.202;VQSLOD=3.0662;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:81.28:0,81,1647	0/0:6,0:6:15.05:0,15,287	0/0:29,0:23:45.15:0,45,818	0/0:17,0:16:18.06:0,18,301	0/0:12,0:12:27.09:0,27,549	0/0:16,0:16:36.11:0,36,696	0/0:28,0:28:66.23:0,66,1336	1/1:10,8:18:39.12:526,39,0	0/0:11,0:11:24.08:0,24,482	0/0:31,0:31:54.18:0,54,1064	0/1:11,1:12:6.89:7,0,633	0/0:17,0:17:39.13:0,39,766	0/0:12,0:12:30.10:0,30,603	0/0:21,0:21:45.15:0,45,898	0/0:15,0:15:42.14:0,42,851	0/0:21,0:21:51.17:0,51,999	0/0:29,0:29:69.21:0,69,1341	0/0:29,0:29:69.17:0,69,1284	0/0:18,0:17:24.08:0,24,488	0/0:13,0:13:30.09:0,30,559	1/1:8,6:14:18.03:237,18,0	0/0:10,0:10:24.08:0,24,488	0/0:15,0:15:30.10:0,30,595	0/0:17,0:17:45.15:0,45,911	0/0:18,0:18:42.12:0,42,759	1/1:7,10:17:36.12:516,36,0	0/0:25,0:25:66.23:0,66,1340	1/1:4,8:12:33.07:450,33,0
chr10	88380176	.	A	AG	1517.23	PASS	AB=0.565;AC=7;AF=0.125;AN=56;BaseQRankSum=4.494;DP=514;FS=9.614;HRun=4;HaplotypeScore=55.5890;InbreedingCoeff=0.9049;MQ=77.24;MQ0=0;MQRankSum=-1.104;QD=30.96;ReadPosRankSum=-3.640;VQSLOD=1.7700;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.25:0,87,985	0/0:10,0:10:30.09:0,30,340	0/0:17,0:17:42.12:0,42,470	0/0:11,0:10:30.04:0,30,327	0/0:19,0:19:54.15:0,54,611	0/0:17,0:17:51.14:0,51,571	0/0:18,0:18:45.13:0,45,510	1/1:1,13:14:36.10:470,36,0	0/0:10,0:10:30.09:0,30,340	0/0:27,0:27:72.20:0,72,810	0/0:4,0:4:12.03:0,12,136	0/0:20,0:20:51.13:0,51,569	0/0:22,0:22:66.19:0,66,748	0/0:26,0:26:78.19:0,78,865	0/0:20,0:19:60.17:0,60,679	0/0:19,0:19:54.14:0,54,604	0/0:28,0:28:81.22:0,81,909	0/0:24,0:24:66.17:0,66,738	0/0:23,0:23:69.19:0,69,774	0/0:18,0:18:45.13:0,45,510	1/1:1,11:12:33.10:433,33,0	0/0:13,0:13:39.11:0,39,442	0/0:10,0:10:30.05:0,30,327	0/0:20,0:20:54.15:0,54,612	0/0:27,0:27:75.20:0,75,841	0/1:3,9:13:0.93:370,0,1	0/0:32,0:32:87.24:0,87,978	1/1:1,9:10:30.09:393,30,0
chr10	88380387	.	TA	T	3997.52	PASS	AB=0.960;AC=25;AF=0.446;AN=56;BaseQRankSum=1.046;DP=495;FS=4.579;HRun=6;HaplotypeScore=89.7712;InbreedingCoeff=0.5197;MQ=78.00;MQ0=2;MQRankSum=0.123;QD=14.59;ReadPosRankSum=1.067;VQSLOD=3.3316;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.11:0,51,623	0/0:8,0:8:24.06:0,24,287	0/0:30,0:17:35.43:0,35,274	0/0:35,0:21:14.86:0,15,168	1/1:2,26:28:72.05:742,72,0	0/1:15,1:16:37.32:37,0,45	0/1:17,1:18:3.26:3,0,34	0/1:25,0:25:2.30:2,0,53	1/1:2,10:12:24.06:256,24,0	0/0:34,0:34:96.27:0,96,1189	0/0:9,0:9:27.09:0,27,355	0/0:10,0:10:1.50:0,1,25	1/1:1,14:15:33.08:352,33,0	0/0:11,0:11:19.08:0,19,54	0/1:16,0:16:17.39:17,0,42	1/1:0,11:11:33.08:353,33,0	0/0:25,0:24:69.20:0,69,879	0/1:20,3:23:16.77:17,0,92	1/1:5,12:17:36.06:374,36,0	1/1:2,15:17:44.97:442,45,0	0/0:5,0:5:9.46:0,9,32	0/1:4,0:4:8.52:9,0,9	1/1:0,19:19:47.99:495,48,0	1/1:1,9:10:24.06:257,24,0	0/0:19,0:19:38.87:0,39,143	0/0:17,0:17:31.51:0,32,154	1/1:1,22:24:57.14:609,57,0	0/1:18,1:19:29.57:30,0,95
chr10	88380710	.	G	GT	376.29	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-3.449;DP=542;FS=0.000;HRun=10;HaplotypeScore=53.7363;InbreedingCoeff=0.6976;MQ=75.43;MQ0=0;MQRankSum=0.252;QD=13.44;ReadPosRankSum=-1.443;VQSLOD=2.9229;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:20:49.88:0,50,388	0/1:5,0:6:2.27:2,0,62	0/0:16,0:15:8.63:0,9,158	0/0:10,0:10:14.70:0,15,110	0/0:33,0:33:74.78:0,75,602	0/0:21,0:21:47.42:0,47,379	0/0:20,0:21:52.95:0,53,421	0/0:24,0:27:60.77:0,61,465	0/0:13,0:13:29.95:0,30,246	0/0:25,0:25:56.90:0,57,467	0/0:19,1:21:17.88:0,18,334	0/0:16,0:17:40.94:0,41,319	0/0:22,0:22:61.94:0,62,496	0/0:21,0:21:47.88:0,48,389	0/0:17,0:18:46.97:0,47,372	0/0:19,0:19:47.94:0,48,394	0/0:29,0:29:74.86:0,75,611	0/0:24,0:24:68.86:0,69,558	0/0:22,0:22:56.91:0,57,464	0/0:15,0:15:23.91:0,24,197	0/0:12,0:13:28.91:0,29,219	0/0:14,0:14:35.91:0,36,290	0/0:15,0:15:29.93:0,30,246	0/0:17,0:17:32.90:0,33,264	1/1:4,18:22:38.20:471,38,0	0/0:18,0:19:46.88:0,47,368	0/0:20,0:22:55.87:0,56,438	0/0:20,0:20:56.89:0,57,460
chr10	88381782	.	GAC	G	3542.63	PASS	AB=0.955;AC=12;AF=0.214;AN=56;BaseQRankSum=2.882;DP=969;FS=16.591;HRun=0;HaplotypeScore=169.6150;InbreedingCoeff=0.5471;MQ=68.08;MQ0=10;MQRankSum=-2.509;QD=12.88;ReadPosRankSum=-2.495;VQSLOD=1.8850;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:61.94:0,62,1014	0/0:11,0:11:24.07:0,24,364	0/0:45,0:28:29.98:0,30,366	0/0:57,0:30:47.56:0,48,602	0/0:20,2:22:4.97:0,5,570	0/0:29,0:29:57.19:0,57,923	0/1:32,2:34:13.63:14,0,809	1/1:7,44:49:99:1458,129,0	0/0:36,2:36:13.47:0,13,1233	0/0:40,2:42:48.78:0,49,1647	0/0:23,0:23:60.20:0,60,969	0/0:47,0:46:99:0,99,1608	0/0:32,2:34:7.40:0,7,1103	0/1:35,2:37:29.07:29,0,1090	0/0:54,0:54:99:0,117,1894	0/0:44,1:44:71.42:0,71,1640	0/0:32,0:32:78.14:0,78,1226	0/0:39,0:38:64.78:0,65,1054	0/1:24,0:23:14.46:14,0,767	0/1:35,3:38:23.33:23,0,1222	1/1:7,24:31:59.82:693,60,0	0/0:24,0:23:48.16:0,48,768	0/0:27,1:28:41.10:0,41,1169	0/0:31,0:30:51.16:0,51,792	0/0:21,0:21:60.20:0,60,976	1/1:10,23:33:41.83:775,42,0	0/0:37,0:36:90.27:0,90,1410	1/1:7,18:24:29.90:536,30,0
chr10	88381821	.	T	TCA	15481.01	PASS	AB=0.979;AC=33;AF=0.589;AN=56;BaseQRankSum=-3.121;DP=1100;FS=3.374;HRun=0;HaplotypeScore=215.1664;InbreedingCoeff=0.9063;MQ=54.68;MQ0=39;MQRankSum=1.747;QD=23.11;ReadPosRankSum=0.014;VQSLOD=5.2105;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:93.33:0,93,1137	0/0:4,0:4:9.03:0,9,114	0/0:77,0:28:61.03:0,61,663	0/1:91,0:27:28.42:28,0,435	1/1:12,14:26:26.49:444,26,0	1/1:3,29:27:57.18:923,57,0	1/1:11,24:36:48.16:794,48,0	0/0:54,0:50:90.21:0,90,1092	1/1:5,40:41:58.59:1226,59,0	0/0:45,0:44:99:0,114,1436	0/0:27,0:27:75.20:0,75,926	1/1:8,40:44:87.02:1439,87,0	1/1:16,16:32:37.57:1007,38,0	1/1:5,33:37:75.26:1244,75,0	1/1:9,48:53:93.03:1536,93,0	1/1:20,27:46:96.30:1513,96,0	0/0:38,0:38:88.49:0,88,1150	1/1:15,28:40:19.63:805,20,0	1/1:12,12:19:45.15:733,45,0	1/1:10,23:33:68.90:1118,69,0	0/0:59,0:59:99:0,120,1360	1/1:5,21:23:45.63:749,46,0	1/1:15,19:34:52.59:779,53,0	1/1:13,12:24:7.62:136,8,0	0/0:29,0:29:75.22:0,75,931	0/0:32,0:30:69.22:0,69,871	1/1:9,19:28:63.19:1005,63,0	0/0:14,0:14:39.12:0,39,492
chr10	88381830	.	C	CAT	7379.79	PASS	AB=0.996;AC=21;AF=0.375;AN=56;BaseQRankSum=10.156;DP=1123;FS=5.423;HRun=0;HaplotypeScore=252.0824;InbreedingCoeff=0.1640;MQ=54.62;MQ0=33;MQRankSum=0.158;QD=12.55;ReadPosRankSum=6.608;VQSLOD=4.0709;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:97.05:0,97,1476	0/0:4,0:4:12.03:0,12,162	0/0:84,0:31:79.04:0,79,996	0/0:88,0:28:37.89:0,38,702	0/1:26,0:26:54.04:211,0,54	1/1:31,0:26:34.61:444,35,0	0/1:38,0:38:77.75:363,0,78	0/0:48,0:46:99:0,117,1566	0/1:46,0:42:14.87:588,0,15	0/0:49,0:48:99:0,141,1945	0/0:28,0:28:78.17:0,78,1164	1/1:45,0:41:62.97:685,63,0	0/1:40,0:40:99:413,0,174	0/1:41,0:40:31.77:572,0,32	0/1:56,0:52:11.44:684,0,11	0/1:43,0:42:24.80:708,0,25	0/0:38,0:38:77.57:0,78,1455	0/1:41,2:38:0.57:506,0,1	0/1:22,0:20:99:301,0,106	1/1:33,0:33:24.83:646,25,0	0/0:74,0:66:99:0,149,1963	0/1:27,0:24:37.38:329,0,37	1/1:33,1:33:2.11:351,2,0	1/1:27,3:29:8.51:72,9,0	0/0:29,0:29:81.25:0,81,1191	0/0:34,0:32:90.08:0,90,1215	0/1:33,0:32:99:505,0,107	0/0:13,0:13:39.13:0,39,594
chr10	88381844	.	TAC	T	5451.11	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=9.782;DP=1101;FS=1.096;HRun=0;HaplotypeScore=262.7292;InbreedingCoeff=0.9776;MQ=53.53;MQ0=35;MQRankSum=-5.491;QD=20.81;ReadPosRankSum=-2.611;VQSLOD=3.9596;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:99:0,109,1807	0/0:4,0:4:9.03:0,9,156	0/0:76,2:21:35.56:0,36,544	0/0:74,0:26:27.58:0,28,784	1/1:8,14:22:22.07:251,22,0	0/0:30,0:25:58.89:0,59,890	0/0:34,0:34:62.78:0,63,1054	0/0:43,0:38:35.56:0,36,1216	0/0:46,0:43:93.32:0,93,1581	0/0:49,0:48:99:0,123,2038	0/0:28,0:28:72.25:0,72,1237	0/0:47,0:44:93.06:0,93,1588	1/1:4,36:40:71.58:916,72,0	0/0:39,0:38:87.30:0,87,1487	0/0:56,0:52:99:0,120,1930	1/1:4,43:47:87.05:1134,87,0	0/0:35,0:35:91.48:0,91,1634	0/0:40,0:35:56.27:0,56,1027	1/1:6,18:22:40.05:660,40,0	1/1:4,28:32:66.14:865,66,0	0/0:84,0:75:99:0,125,2128	0/0:23,0:21:51.12:0,51,823	1/1:3,26:28:35.92:448,36,0	1/1:5,27:32:8.06:120,8,0	0/0:30,0:30:78.25:0,78,1309	0/0:37,0:35:99:0,99,1625	1/1:4,32:36:81.26:1058,81,0	0/0:15,0:15:33.04:0,33,537
chr10	88381876	.	TAC	T	2652.51	PASS	AB=0.729;AC=7;AF=0.125;AN=56;BaseQRankSum=9.595;DP=1102;FS=5.878;HRun=0;HaplotypeScore=239.3474;InbreedingCoeff=0.8726;MQ=48.49;MQ0=55;MQRankSum=-6.994;QD=16.68;ReadPosRankSum=-4.776;VQSLOD=1.8554;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,126,2049	0/0:4,0:4:9.03:0,9,156	0/0:70,0:11:23.77:0,24,370	0/0:75,0:6:9.03:0,9,140	0/0:21,0:21:36.61:0,37,622	0/0:24,0:19:43.70:0,44,731	0/0:49,0:49:99:0,123,2059	1/1:15,11:21:34.60:321,35,0	0/0:47,0:44:96.31:0,96,1617	0/0:47,0:46:99:0,123,2058	0/0:21,0:21:54.13:0,54,837	0/0:50,0:47:99:0,108,1821	0/0:53,0:53:99:0,116,1971	0/0:38,0:37:93.27:0,93,1537	0/0:53,0:49:99:0,126,2113	0/0:46,0:46:70.44:0,70,1254	0/0:38,0:38:93.77:0,94,1536	0/0:44,0:41:99:0,106,1641	0/0:32,0:22:54.03:0,54,785	0/0:25,0:24:39.28:0,39,744	1/1:59,7:60:89.76:1024,90,0	0/0:22,0:20:48.16:0,48,831	0/0:25,0:24:21.49:0,21,425	0/0:43,0:43:40.96:0,41,637	0/0:28,0:28:78.27:0,78,1340	0/1:27,16:39:1.86:928,0,2	0/0:39,0:38:90.31:0,90,1526	1/1:6,11:17:50.85:528,51,0
chr10	88381894	.	T	TAC	2587.93	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.584;DP=1128;FS=1.510;HRun=0;HaplotypeScore=233.7158;InbreedingCoeff=0.9258;MQ=50.76;MQ0=61;MQRankSum=-5.617;QD=19.91;ReadPosRankSum=-0.932;VQSLOD=3.6265;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,101,1289	0/0:6,0:6:18.04:0,18,219	0/0:72,0:13:26.06:0,26,317	0/0:77,0:6:15.05:0,15,189	0/0:21,0:21:47.85:0,48,613	0/0:26,0:26:38.60:0,39,474	0/0:58,0:58:99:0,150,1884	1/1:11,13:20:3.31:560,3,0	0/0:44,0:44:99:0,102,1241	0/0:41,0:41:99:0,120,1528	0/0:14,0:14:33.11:0,33,425	0/0:49,0:48:99:0,103,1502	0/0:59,0:59:99:0,136,1733	0/0:43,0:42:99:0,120,1495	0/0:60,0:60:99:0,132,1698	0/0:55,0:55:99:0,106,1364	0/0:37,0:37:84.27:0,84,1090	0/0:42,0:43:60.34:0,60,1123	0/0:34,0:28:60.64:0,61,745	0/0:32,0:32:73.64:0,74,935	1/1:50,5:44:19.16:748,19,0	0/0:24,0:23:54.07:0,54,670	0/0:26,0:26:46.56:0,47,580	0/0:50,0:50:69.62:0,70,876	0/0:30,0:30:81.26:0,81,1051	1/1:22,17:34:9.24:1096,9,0	0/0:46,0:46:99:0,114,1439	1/1:3,9:12:27.07:330,27,0
chr10	88381916	.	CACACACACAT	C	1717.40	PASS	AB=0.926;AC=6;AF=0.107;AN=56;BaseQRankSum=8.576;DP=1103;FS=3.446;HRun=0;HaplotypeScore=330.5860;InbreedingCoeff=0.4388;MQ=52.98;MQ0=66;MQRankSum=-6.820;QD=10.60;ReadPosRankSum=1.705;VQSLOD=1.5732;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,99,4466	0/0:8,0:8:21.07:0,21,1068	0/1:59,0:5:0:0,0,0	0/0:74,0:9:14.92:0,15,362	0/0:21,0:21:45.12:0,45,2036	0/0:22,0:22:56.95:0,57,2518	0/0:58,0:58:99:0,129,5115	0/1:20,0:19:99:124,0,169	0/0:51,0:51:99:0,132,5356	0/0:39,0:39:90.30:0,90,3989	0/0:17,0:15:36.12:0,36,1553	0/0:52,0:52:99:0,140,5856	0/0:58,0:58:99:0,122,5403	0/0:51,0:50:99:0,135,6002	0/0:63,0:63:99:0,163,6921	0/0:54,0:53:99:0,105,4542	0/0:35,0:35:60.98:0,61,3631	0/0:42,0:42:72.99:0,73,3934	0/0:30,0:23:51.18:0,51,2019	0/0:34,0:34:90.30:0,90,3728	0/1:44,1:36:4.84:18,0,5	0/0:26,0:25:63.12:0,63,2768	0/0:21,0:21:42.12:0,42,1533	0/0:59,0:59:89.75:0,90,4042	0/0:33,0:33:87.30:0,87,3859	0/1:18,11:28:99:1120,0,326	0/0:49,0:48:99:0,108,5021	1/1:3,6:9:21.03:577,21,0
chr10	88381926	.	TACAC	T	451.02	PASS	AB=0.958;AC=5;AF=0.089;AN=56;BaseQRankSum=8.631;DP=1116;FS=6.059;HRun=0;HaplotypeScore=231.6703;InbreedingCoeff=0.4011;MQ=52.51;MQ0=54;MQRankSum=-6.119;QD=4.18;ReadPosRankSum=0.871;VQSLOD=2.0617;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,111,2626	0/0:8,0:8:24.08:0,24,604	0/0:57,0:7:9.03:0,9,155	0/0:67,0:18:36.12:0,36,722	0/0:24,0:24:60.13:0,60,1353	0/0:20,0:20:57.06:0,57,1423	0/0:58,0:58:99:0,151,3223	0/1:24,3:26:53.08:53,0,302	0/0:54,0:54:99:0,131,3343	0/0:39,0:38:99:0,102,2409	0/0:18,0:16:45.15:0,45,1043	0/0:55,0:55:99:0,153,3560	0/0:52,0:52:99:0,129,3090	0/0:53,0:51:99:0,147,3583	0/0:63,0:63:99:0,181,4243	0/0:53,0:52:99:0,108,2514	0/0:33,0:35:87.30:0,87,2106	0/0:38,0:38:99:0,104,2346	0/0:36,0:26:69.23:0,69,1554	0/0:39,0:39:99:0,108,2223	0/1:34,0:27:5.26:18,0,5	0/0:25,0:24:69.22:0,69,1669	0/0:20,0:20:48.10:0,48,934	0/0:63,0:63:92.63:0,93,2210	0/0:41,0:41:99:0,114,2573	0/1:34,0:35:99:312,0,258	0/0:45,0:44:99:0,111,2797	1/1:9,1:10:20.98:191,21,0
chr10	88381934	.	CAT	C	112.90	PASS	AB=0.971;AC=4;AF=0.071;AN=56;BaseQRankSum=11.001;DP=1119;FS=1.869;HRun=0;HaplotypeScore=196.5747;InbreedingCoeff=0.3544;MQ=53.26;MQ0=43;MQRankSum=-3.199;QD=1.76;ReadPosRankSum=3.550;VQSLOD=2.7447;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,121,2089	0/0:11,0:11:32.95:0,33,544	0/0:55,0:11:13.15:0,13,235	0/0:62,0:19:50.64:0,51,684	0/0:25,0:25:32.15:0,32,1055	0/0:24,0:24:69.17:0,69,1176	0/0:55,0:55:99:0,156,2602	0/0:43,1:40:54.94:0,55,850	0/0:52,0:52:99:0,148,2541	0/0:36,0:35:99:0,99,1783	0/0:18,0:16:47.94:0,48,820	0/0:54,0:54:99:0,133,2677	0/0:47,0:47:90.33:0,90,2206	0/0:56,0:54:99:0,156,2735	0/0:66,0:66:99:0,190,3279	0/0:51,0:50:61.12:0,61,1823	0/0:35,0:35:86.49:0,86,1616	0/0:35,0:35:79.09:0,79,1693	0/0:35,0:27:52.32:0,52,1233	0/0:37,0:37:13.07:0,13,1549	0/0:37,1:30:25.17:0,25,161	0/0:27,0:26:74.38:0,74,1306	0/1:22,0:22:16.57:17,0,685	0/0:65,0:65:83.90:0,84,1723	0/0:39,0:39:99:0,117,2106	0/1:30,2:30:99:144,0,395	0/0:43,0:42:99:0,114,2091	1/1:10,0:10:5.14:56,5,0
chr10	88381936	.	TAC	T	251.31	PASS	AB=0.912;AC=7;AF=0.125;AN=56;BaseQRankSum=10.551;DP=1115;FS=1.241;HRun=0;HaplotypeScore=197.2605;InbreedingCoeff=0.1346;MQ=53.23;MQ0=36;MQRankSum=-2.538;QD=1.44;ReadPosRankSum=4.190;VQSLOD=2.5076;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:85.86:0,86,2060	0/0:11,0:11:33.11:0,33,577	0/0:59,0:14:21.02:0,21,441	0/0:57,0:20:54.03:0,54,844	0/1:23,2:25:16.65:17,0,1060	0/0:24,0:24:69.22:0,69,1198	0/0:57,0:57:99:0,141,2364	0/0:46,0:42:85.90:0,86,1608	0/0:53,0:53:99:0,138,2351	0/0:35,0:34:99:0,99,1772	0/0:19,0:17:48.10:0,48,800	0/0:53,0:53:99:0,148,2587	0/0:44,2:46:37.50:0,38,2009	0/0:55,0:53:99:0,144,2595	0/0:63,0:63:99:0,181,3126	0/1:47,3:49:16.53:17,0,1726	0/0:36,0:36:86.82:0,87,1612	0/0:34,0:34:90.11:0,90,1565	0/0:34,1:27:32.39:0,32,1211	0/1:32,5:37:99:113,0,1443	0/0:38,0:29:24.98:0,25,319	0/0:26,0:25:72.19:0,72,1246	0/1:16,5:21:99:115,0,731	0/0:54,10:64:63.14:0,63,1744	0/0:38,0:39:99:0,110,1951	0/1:32,0:30:82.24:82,0,548	0/0:42,0:41:99:0,111,1964	1/1:10,0:10:6.34:38,6,0
chr10	88381974	.	C	CACAT	4183.94	PASS	AB=0.663;AC=5;AF=0.089;AN=56;BaseQRankSum=0.181;DP=1066;FS=2.917;HRun=0;HaplotypeScore=225.8048;InbreedingCoeff=0.2700;MQ=53.07;MQ0=53;MQRankSum=-7.715;QD=31.70;ReadPosRankSum=-1.527;VQSLOD=2.9046;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,2395	0/0:15,0:15:45.14:0,45,803	0/0:57,0:10:26.50:0,26,432	0/0:60,0:11:26.08:0,26,329	0/0:27,0:27:72.21:0,72,1280	0/0:27,0:27:71.78:0,72,1268	0/0:47,0:47:99:0,123,2219	0/1:26,14:34:99:1071,0,219	0/0:49,0:49:99:0,127,2343	0/0:33,0:33:88.84:0,89,1566	0/0:22,0:21:60.21:0,60,1113	0/0:45,0:45:99:0,126,2167	0/0:37,0:37:89.89:0,90,1523	0/0:44,0:43:99:0,126,2293	0/0:58,0:58:99:0,165,2901	0/0:47,0:47:99:0,118,1958	0/0:30,0:30:81.73:0,82,1440	0/0:25,0:25:72.14:0,72,1201	0/0:26,0:19:54.05:0,54,910	0/0:40,0:40:99:0,114,2050	0/1:23,28:42:9.73:1146,0,10	0/0:31,0:30:84.25:0,84,1469	0/0:29,0:29:87.21:0,87,1437	0/0:61,0:61:99:0,119,2150	0/0:44,0:44:99:0,120,2227	0/1:12,23:34:98.53:1870,0,99	0/0:33,0:32:90.25:0,90,1574	1/1:5,1:6:3.74:97,4,0
chr10	88382024	.	TGC	T	151.91	PASS	AB=0.808;AC=2;AF=0.036;AN=56;BaseQRankSum=6.271;DP=904;FS=16.625;HRun=0;HaplotypeScore=162.6781;InbreedingCoeff=-0.0361;MQ=52.32;MQ0=22;MQRankSum=-5.953;QD=4.11;ReadPosRankSum=-0.237;VQSLOD=1.6726;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,116,1936	0/0:16,0:16:48.11:0,48,829	0/0:35,0:11:26.13:0,26,416	0/0:41,1:14:39.07:0,39,614	0/0:29,0:29:87.24:0,87,1632	0/0:26,0:26:66.11:0,66,1172	0/0:39,0:39:99:0,105,1947	0/0:33,0:27:65.86:0,66,790	0/0:49,0:49:99:0,123,2578	0/0:46,0:45:99:0,112,2377	0/0:25,0:25:70.83:0,71,1293	0/0:38,0:39:93.33:0,93,1854	0/0:40,0:40:99:0,105,2065	0/0:33,0:33:90.69:0,91,1643	0/0:42,0:42:99:0,117,2142	0/0:36,0:36:69.16:0,69,1285	0/0:28,0:28:74.64:0,75,1339	0/0:31,0:31:84.34:0,84,1550	0/0:27,0:19:54.13:0,54,931	0/0:33,0:33:96.26:0,96,1751	0/1:24,2:20:18.41:18,0,42	0/0:28,0:28:81.16:0,81,1390	0/0:30,0:30:81.14:0,81,1485	0/0:38,1:39:98.53:0,99,1852	0/0:36,0:36:99:0,105,2037	0/0:17,0:17:28.31:0,28,503	0/0:24,0:24:60.09:0,60,1138	0/1:6,5:11:32:221,0,32
chr10	88382040	.	CAT	C	229.23	PASS	AB=0.864;AC=6;AF=0.107;AN=56;BaseQRankSum=8.195;DP=814;FS=1.658;HRun=0;HaplotypeScore=140.1993;InbreedingCoeff=0.1482;MQ=52.97;MQ0=20;MQRankSum=-6.530;QD=2.46;ReadPosRankSum=-2.239;VQSLOD=1.9519;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,2:34:36.06:0,36,1309	0/0:13,0:13:37.64:0,38,652	0/0:26,1:6:18.06:0,18,347	0/0:24,0:8:17.24:0,17,383	0/0:31,0:31:87.74:0,88,1578	0/0:26,1:27:63.63:0,64,1105	0/0:37,0:37:99:0,103,1786	0/1:23,3:21:99:109,0,151	0/0:48,0:48:99:0,141,2550	0/0:41,0:40:83:0,83,1891	0/0:22,0:23:66.18:0,66,1154	0/0:36,0:36:67.33:0,67,1649	0/0:43,0:43:99:0,103,1861	0/0:30,0:30:84.75:0,85,1600	0/0:42,0:42:99:0,108,1862	0/0:32,0:32:72.23:0,72,1340	0/0:29,1:30:76.09:0,76,1297	0/1:26,2:29:28.14:28,0,1157	0/0:22,0:15:36.09:0,36,647	0/0:33,0:33:95.64:0,96,1644	1/1:15,0:9:3.01:34,3,0	0/0:24,0:24:63.21:0,63,1168	0/0:32,0:32:81.26:0,81,1492	0/0:31,2:33:81.26:0,81,1498	0/0:37,0:37:99:0,102,1781	0/1:10,1:10:75.08:75,0,82	0/0:22,0:22:57.12:0,57,1095	0/1:7,5:12:24.47:104,0,24
chr10	88382057	.	ATG	A	1099.54	PASS	AB=0.833;AC=7;AF=0.125;AN=56;BaseQRankSum=7.605;DP=805;FS=2.852;HRun=0;HaplotypeScore=134.7264;InbreedingCoeff=0.8175;MQ=54.98;MQ0=16;MQRankSum=-6.511;QD=16.66;ReadPosRankSum=-3.691;VQSLOD=2.9770;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:34:86.10:0,86,1566	0/0:10,0:10:30.10:0,30,559	0/0:39,0:14:19.98:0,20,518	0/0:29,1:14:9.62:0,10,575	0/0:30,0:30:75.73:0,76,1458	0/0:24,1:25:60.65:0,61,1147	0/0:33,0:33:92.93:0,93,1714	1/1:16,5:15:29.72:322,30,0	0/0:43,0:43:99:0,129,2482	0/0:43,0:42:99:0,104,2267	0/0:24,0:24:69.02:0,69,1292	0/0:34,0:34:56.89:0,57,1555	0/0:34,1:35:78.32:0,78,1828	0/0:34,0:34:96.58:0,97,1818	0/0:36,0:36:99:0,102,1954	0/0:28,0:28:74.83:0,75,1380	0/0:26,0:26:66.61:0,67,1161	0/0:29,0:29:76.96:0,77,1434	0/0:20,0:18:48.16:0,48,902	0/0:39,0:39:99:0,110,1994	1/1:14,3:17:15.03:196,15,0	0/0:26,0:26:75.26:0,75,1403	0/0:31,0:31:75.26:0,75,1420	0/0:31,0:31:71.97:0,72,1200	0/0:33,0:33:89.94:0,90,1642	0/1:12,3:14:19.04:425,0,19	0/0:25,0:25:69.16:0,69,1318	1/1:4,9:13:28.37:304,28,0
chr10	88382453	.	CGT	C	531.49	PASS	AB=0.920;AC=22;AF=0.423;AN=52;BaseQRankSum=4.677;DP=549;FS=2.124;HRun=0;HaplotypeScore=72.8350;InbreedingCoeff=0.1371;MQ=69.22;MQ0=14;MQRankSum=0.572;QD=1.88;ReadPosRankSum=2.969;VQSLOD=1.3031;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:10.91:11,0,204	0/0:5,0:5:3.01:0,3,44	./.	./.	0/0:19,0:18:6.02:0,6,84	1/1:14,3:18:8.85:78,9,0	0/1:17,4:21:52.95:81,0,53	0/0:26,0:25:5.87:0,6,35	1/1:14,4:17:5.70:63,6,0	0/0:24,0:24:9.03:0,9,132	0/0:15,0:15:2.66:0,3,119	1/1:11,3:14:3:32,3,0	0/0:20,0:20:6.99:0,7,240	1/1:13,4:17:6.01:64,6,0	0/1:13,0:13:2.07:2,0,119	0/0:19,0:19:21.01:0,21,266	0/1:15,1:16:11.26:11,0,229	0/1:14,3:17:32.14:84,0,32	0/0:14,0:13:3.01:0,3,44	0/1:20,0:21:16.41:16,0,134	0/0:36,0:36:18.04:0,18,220	1/1:12,3:15:6.01:64,6,0	0/1:8,1:9:18.06:18,0,38	0/1:23,4:26:63.32:63,0,296	1/1:17,0:25:14.20:70,14,0	0/0:13,0:13:8.67:0,9,56	1/1:18,1:19:3:32,3,0	0/0:8,0:8:4.07:0,4,12
chr10	88383182	.	C	CCCAT	6604.51	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.442;DP=663;FS=3.218;HRun=0;HaplotypeScore=116.9961;InbreedingCoeff=0.9971;MQ=95.16;MQ0=0;MQRankSum=-8.348;QD=64.12;ReadPosRankSum=-2.112;VQSLOD=6.3795;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.26:0,90,1606	0/0:9,0:9:24.07:0,24,423	0/0:32,0:32:81.09:0,81,1430	0/0:30,0:30:71.60:0,72,1322	0/0:26,0:26:75.22:0,75,1342	0/0:25,0:25:75.23:0,75,1361	0/0:21,0:21:63.22:0,63,1165	1/1:9,19:29:84.25:2087,84,0	0/0:17,0:17:51.17:0,51,953	0/0:20,0:20:59.01:0,59,1054	0/0:26,0:26:72.22:0,72,1267	0/0:23,0:23:69.24:0,69,1309	0/0:18,0:18:54.18:0,54,1010	0/0:30,0:30:90.30:0,90,1662	0/0:21,0:21:60.21:0,60,1108	0/0:25,0:25:72.23:0,72,1303	0/0:28,0:27:81.28:0,81,1532	0/0:17,0:17:51.17:0,51,937	0/0:27,0:27:78.25:0,78,1387	0/0:30,0:30:90.28:0,90,1627	1/1:2,18:20:39.13:1009,39,0	0/0:23,0:23:69.24:0,69,1279	0/0:15,0:15:42.12:0,42,733	0/0:23,0:23:69.24:0,69,1310	0/0:15,0:15:39.13:0,39,739	1/1:11,33:46:66.77:3024,67,0	0/0:27,0:27:78.27:0,78,1466	1/1:0,8:8:18.06:485,18,0
chr10	88383987	.	G	GTGTCCTTGTTGTTTGGATA	2585.20	PASS	AB=0.714;AC=29;AF=0.967;AN=30;BaseQRankSum=-2.399;DP=41;FS=16.385;HRun=0;HaplotypeScore=27.7376;InbreedingCoeff=-0.1941;MQ=144.57;MQ0=0;MQRankSum=-2.685;QD=71.81;ReadPosRankSum=-1.325;VQSLOD=1.0878;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,0:1:3:25,3,0	1/1:4,1:8:9.72:974,10,0	0/1:3,0:5:16.03:703,0,16	1/1:1,0:1:3.01:91,3,0	1/1:1,0:1:3.01:92,3,0	./.	1/1:1,0:1:3.01:54,3,0	1/1:1,0:1:3.01:73,3,0	./.	1/1:1,0:1:3.01:93,3,0	1/1:4,0:4:7.23:117,7,0	./.	1/1:2,0:2:3.01:73,3,0	./.	1/1:3,0:3:2.97:20,3,0	./.	./.	./.	./.	1/1:1,0:1:3:25,3,0	./.	./.	1/1:4,0:4:6.02:145,6,0	1/1:2,0:2:6.01:119,6,0	./.	1/1:1,0:1:3.01:64,3,0	./.
chr10	88384788	.	TAC	T	3011	PASS	AB=0.897;AC=18;AF=0.321;AN=56;BaseQRankSum=-3.105;DP=667;FS=2.542;HRun=0;HaplotypeScore=129.0395;InbreedingCoeff=0.6114;MQ=32.40;MQ0=2;MQRankSum=-0.191;QD=12.49;ReadPosRankSum=-1.189;VQSLOD=3.1820;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:24.44:0,24,324	0/0:10,0:10:0.72:0,1,112	0/1:9,1:5:7.60:8,0,101	0/0:8,0:3:12.03:0,12,161	1/1:27,7:34:35.26:431,35,0	0/0:20,0:20:34.35:0,34,464	0/0:24,0:24:33.87:0,34,493	0/0:26,0:27:74.12:0,74,506	0/1:14,8:22:8.38:199,0,8	0/0:49,1:50:91.45:0,91,993	0/0:26,0:26:20.54:0,21,297	0/0:28,0:28:60.05:0,60,857	1/1:13,13:26:44.96:556,45,0	0/0:36,0:36:52.29:0,52,707	0/0:32,0:32:70.37:0,70,806	1/1:7,20:27:44.54:670,45,0	0/0:10,0:10:6.04:0,6,229	0/0:12,0:12:24:0,24,341	0/1:17,1:16:55.73:150,0,56	1/1:18,11:29:16.51:372,17,0	0/0:17,0:17:8.75:0,9,65	0/0:48,0:48:57.81:0,58,753	1/1:17,11:27:18.51:289,19,0	1/1:7,14:21:11.10:169,11,0	0/0:25,0:29:24.42:0,24,162	0/0:26,0:27:70.06:0,70,468	1/1:9,11:20:1.52:353,2,0	0/1:6,0:6:2.66:3,0,18
chr10	88384790	.	C	CAT	1906.84	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=1.953;DP=693;FS=1.418;HRun=0;HaplotypeScore=225.8467;InbreedingCoeff=0.4067;MQ=33.06;MQ0=2;MQRankSum=-0.720;QD=5.33;ReadPosRankSum=-0.741;VQSLOD=2.6902;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:25.37:0,25,320	0/0:11,0:11:13.78:0,14,131	0/1:11,0:6:7.60:8,0,100	0/0:8,0:3:11.24:0,11,117	1/1:32,3:35:36.04:256,36,0	0/0:19,0:20:37.44:0,37,429	0/0:24,0:24:13.45:0,13,419	0/1:28,0:28:85.35:167,0,85	1/1:21,0:22:3.17:80,3,0	0/0:53,0:53:40.76:0,41,663	0/0:27,0:27:17.97:0,18,264	0/0:28,0:28:58.75:0,59,774	1/1:26,1:27:7.99:207,8,0	0/0:38,0:38:53.18:0,53,659	0/0:33,0:33:66.14:0,66,732	1/1:27,0:27:24.87:287,25,0	0/0:10,0:10:15.94:0,16,226	0/0:12,0:12:14.82:0,15,290	0/1:18,0:16:10.91:134,0,11	1/1:30,0:30:20.46:195,20,0	0/1:20,0:20:17.56:18,0,53	0/0:48,0:48:55.98:0,56,689	1/1:29,1:29:28.85:251,29,0	1/1:21,0:21:14.58:95,15,0	0/1:32,0:32:39.28:105,0,39	0/1:30,0:30:99:125,0,102	0/1:20,0:20:1.92:167,0,2	0/1:7,0:7:5.87:6,0,30
chr10	88384795	.	A	AAACTGG	5256.32	PASS	AB=0.968;AC=21;AF=0.375;AN=56;BaseQRankSum=0.123;DP=744;FS=115.643;HRun=0;HaplotypeScore=253.7565;InbreedingCoeff=-0.6055;MQ=36.26;MQ0=2;MQRankSum=-7.793;QD=8.92;ReadPosRankSum=-2.258;VQSLOD=-0.6790;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:37.57:38,0,572	0/1:11,0:11:63.09:63,0,205	0/0:14,0:9:27.08:0,27,521	0/0:11,0:6:21.07:0,21,443	0/0:37,0:37:26.38:0,26,678	0/1:21,0:21:99:150,0,763	0/1:27,0:27:99:180,0,886	0/1:19,10:29:99:1185,0,341	0/1:24,0:24:99:134,0,297	0/1:55,0:55:99:912,0,1291	0/1:28,0:28:25.49:25,0,518	0/1:31,0:31:18.86:19,0,1437	0/1:27,0:28:25.31:25,0,834	0/1:39,0:40:78.42:78,0,1088	0/1:34,0:34:99:286,0,1068	0/1:29,0:29:99:122,0,853	0/1:13,0:13:25.43:25,0,402	0/0:13,0:13:8.98:0,9,608	0/1:19,1:18:99:209,0,539	0/0:34,0:34:29.34:0,29,795	0/0:23,0:23:30.58:0,31,642	0/1:50,0:50:99:113,0,1203	0/1:31,0:30:34.50:35,0,390	0/0:23,0:23:18.05:0,18,252	0/1:32,0:32:99:184,0,298	0/1:26,7:34:99:1092,0,354	0/1:21,0:21:99:272,0,637	0/1:6,1:7:63.86:110,0,64
chr10	88384797	.	A	ACTGG	2964.15	PASS	AB=0.839;AC=16;AF=0.286;AN=56;BaseQRankSum=6.044;DP=768;FS=73.597;HRun=0;HaplotypeScore=162.0168;InbreedingCoeff=-0.4052;MQ=40.92;MQ0=2;MQRankSum=-7.752;QD=6.88;ReadPosRankSum=1.767;VQSLOD=0.2483;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,3:26:13.90:0,14,458	0/1:7,4:11:38.69:39,0,157	0/0:15,0:10:30.10:0,30,549	0/0:14,0:9:27.03:0,27,450	0/0:30,8:38:51.23:0,51,659	0/1:15,6:21:32.18:32,0,604	0/1:24,5:29:19.12:19,0,845	0/1:30,0:30:99:371,0,792	0/1:20,6:26:23.17:23,0,289	0/1:41,14:55:99:1285,0,1468	0/0:20,8:28:6.10:0,6,455	0/0:27,5:32:38.02:0,38,1212	0/0:23,6:29:22.46:0,22,681	0/0:34,8:42:15.68:0,16,911	0/1:23,13:36:62.45:62,0,828	0/1:26,4:30:39.63:40,0,631	0/1:13,1:14:35.10:35,0,337	0/1:12,1:13:48.56:49,0,513	0/1:19,2:19:99:225,0,558	0/0:26,7:34:55.65:0,56,761	0/0:24,0:24:36.70:0,37,635	0/1:40,10:50:7.60:8,0,958	0/0:26,5:30:15.36:0,15,339	0/0:23,1:24:18.05:0,18,233	0/1:24,7:32:39.61:40,0,202	0/1:30,4:34:99:604,0,788	0/1:16,5:21:99:219,0,469	0/1:5,2:8:71.82:72,0,117
chr10	88385989	.	A	AT	3088.81	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.343;DP=641;FS=0.000;HRun=1;HaplotypeScore=69.4013;InbreedingCoeff=0.9914;MQ=86.52;MQ0=0;MQRankSum=-3.303;QD=38.61;ReadPosRankSum=-1.404;VQSLOD=3.5937;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1323	0/0:9,0:9:27.09:0,27,350	0/0:18,0:18:51.16:0,51,654	0/0:25,0:25:72.16:0,72,872	0/0:22,0:22:66.20:0,66,832	0/0:17,0:17:51.16:0,51,650	0/0:32,0:32:96.28:0,96,1215	1/1:1,21:22:66.21:969,66,0	0/0:25,0:25:72.22:0,72,920	0/0:30,0:30:87.27:0,87,1117	0/0:21,0:21:60.19:0,60,779	0/0:25,0:25:75.22:0,75,944	0/0:22,0:22:63.17:0,63,777	0/0:17,0:17:51.17:0,51,661	0/0:24,0:24:66.20:0,66,842	0/0:26,0:26:75.23:0,75,959	0/0:33,0:33:99:0,99,1271	0/0:28,0:28:84.24:0,84,1061	0/0:22,0:22:63.20:0,63,818	0/0:22,0:22:63.15:0,63,783	1/1:1,23:24:63.21:944,63,0	0/0:20,0:20:60.15:0,60,748	0/0:21,0:21:57.19:0,57,740	0/0:18,0:18:51.14:0,51,645	0/0:15,0:15:42.14:0,42,545	1/1:1,16:17:12.21:660,12,0	0/0:35,0:35:99:0,99,1242	1/1:0,17:17:45.15:674,45,0
chr10	88387465	.	GATGATA	G	572.79	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.437;DP=453;FS=2.346;HRun=0;HaplotypeScore=88.9245;InbreedingCoeff=0.7557;MQ=58.69;MQ0=2;MQRankSum=-5.520;QD=35.80;ReadPosRankSum=1.133;VQSLOD=3.1606;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.07:0,54,1246	0/0:7,0:7:21.04:0,21,532	0/0:9,0:3:5.94:0,6,43	0/0:10,0:9:9.08:0,9,239	0/0:34,0:34:96.25:0,96,2826	0/0:13,0:13:39.11:0,39,1216	0/0:10,0:10:30.06:0,30,659	0/0:30,0:30:87.16:0,87,1520	0/0:11,0:11:33.09:0,33,911	0/0:24,0:24:69.22:0,69,2201	0/0:22,0:22:63.15:0,63,1735	0/0:8,0:8:24.01:0,24,449	0/0:9,0:9:27.06:0,27,707	0/0:17,0:17:51.17:0,51,1628	0/0:13,0:13:36.07:0,36,837	0/0:13,0:13:39.12:0,39,1260	0/0:29,0:29:87.23:0,87,2558	0/0:22,0:22:60.55:0,61,1568	0/0:11,0:11:33.08:0,33,764	0/0:29,0:29:87.20:0,87,2375	0/0:10,0:10:27.07:0,27,630	0/0:2,0:2:6.02:0,6,216	0/0:11,0:11:30.06:0,30,819	0/0:6,0:6:18.04:0,18,482	1/1:1,15:16:30.10:667,30,0	0/0:18,0:18:51.12:0,51,1238	0/0:37,0:37:99:0,105,2657	0/0:13,0:13:12.11:0,12,892
chr10	88388250	.	GA	G	3617.66	PASS	AB=0.908;AC=15;AF=0.268;AN=56;BaseQRankSum=14.286;DP=674;FS=15.778;HRun=10;HaplotypeScore=74.5569;InbreedingCoeff=0.7301;MQ=72.77;MQ0=0;MQRankSum=-1.098;QD=15.46;ReadPosRankSum=-0.133;VQSLOD=2.4015;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,2:35:61.12:0,61,868	0/0:12,0:12:21.04:0,21,221	0/1:15,1:13:6.69:7,0,181	0/1:17,2:20:44.51:45,0,239	0/0:22,0:23:50.96:0,51,539	0/0:19,2:21:25.08:0,25,496	0/0:23,2:25:17.06:0,17,636	1/1:9,23:32:70.69:595,71,0	1/1:4,24:28:71.97:624,72,0	0/0:22,0:22:54.15:0,54,597	0/0:24,0:24:69.17:0,69,751	0/0:27,0:27:62.20:0,62,700	0/0:21,2:23:5.60:0,6,513	0/0:15,0:15:42.07:0,42,432	0/0:28,0:28:78.21:0,78,863	0/0:26,0:26:52.77:0,53,774	0/1:29,3:32:5.96:6,0,624	0/0:21,0:22:39.47:0,39,476	0/0:15,1:16:10.04:0,10,339	0/0:30,0:30:81.22:0,81,896	1/1:1,9:12:31.07:246,31,0	0/0:21,1:22:34.08:0,34,586	0/0:23,1:24:40.11:0,40,663	0/0:18,0:18:45.12:0,45,498	1/1:3,33:36:89.98:781,90,0	1/1:5,36:41:77.74:892,78,0	0/0:25,2:27:49.11:0,49,744	1/1:1,16:17:50.03:423,50,0
chr10	88388873	.	TCGAACAAACAAA	T	10846.21	PASS	AB=0.737;AC=31;AF=0.574;AN=54;BaseQRankSum=5.832;DP=713;FS=1.710;HRun=0;HaplotypeScore=298.2876;InbreedingCoeff=0.3002;MQ=74.34;MQ0=1;MQRankSum=-4.904;QD=22.88;ReadPosRankSum=-2.700;VQSLOD=3.0513;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,6220	0/0:14,0:14:35.01:0,35,1556	0/0:29,0:25:69.93:0,70,1228	0/0:35,0:30:69.78:0,70,1155	1/1:0,15:15:44.90:774,45,0	0/1:6,0:17:29.86:30,0,616	0/1:13,0:21:99:153,0,544	1/1:18,0:20:28.09:395,28,0	0/1:21,0:22:93.78:94,0,2019	0/0:39,0:39:99:0,116,4600	0/0:19,0:19:57.01:0,57,2244	0/1:11,0:17:99:160,0,417	1/1:1,27:28:36.12:1341,36,0	0/1:14,0:27:99:118,0,837	0/1:12,0:32:97.49:97,0,1220	1/1:0,42:42:71.83:2620,72,0	0/0:56,0:56:99:0,162,6187	0/1:12,0:28:52.45:52,0,966	1/1:0,16:16:44.84:665,45,0	1/1:0,29:29:80.51:1289,81,0	1/1:11,0:13:4.95:183,5,0	0/1:12,0:23:99:209,0,648	1/1:0,17:17:21.70:553,22,0	1/1:0,37:37:29.81:829,30,0	0/1:30,0:30:99:156,0,2298	1/1:12,0:24:42.98:481,43,0	1/1:0,16:16:18.06:647,18,0	./.
chr10	88388876	.	AAC	A	4145.47	PASS	AB=0.979;AC=28;AF=0.519;AN=54;BaseQRankSum=15.882;DP=713;FS=1.704;HRun=0;HaplotypeScore=188.5132;InbreedingCoeff=0.5487;MQ=72.41;MQ0=2;MQRankSum=-7.875;QD=10.11;ReadPosRankSum=1.552;VQSLOD=3.3217;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,139,2533	0/0:12,0:12:36.12:0,36,639	0/0:30,0:25:70.41:0,70,1045	0/0:34,0:29:84.24:0,84,1210	0/0:15,0:15:6.14:0,6,240	1/1:6,11:17:42.09:391,42,0	1/1:13,8:21:15.08:250,15,0	1/1:18,0:20:29.04:104,29,0	0/0:21,0:21:52.19:0,52,930	0/0:41,0:41:99:0,119,2115	0/0:21,0:21:63.21:0,63,1092	1/1:11,6:17:30.96:271,31,0	1/1:27,0:27:10.02:123,10,0	1/1:12,13:25:64.63:587,65,0	1/1:14,20:34:81.76:734,82,0	1/1:42,0:42:8.96:235,9,0	0/0:54,0:54:99:0,163,2776	1/1:13,16:29:38.54:598,39,0	0/1:17,0:16:5.62:6,0,175	0/1:29,0:29:14.33:14,0,323	0/1:12,0:14:14.33:43,0,14	1/1:12,11:23:53.59:408,54,0	0/1:17,0:17:24.88:25,0,46	0/1:38,0:38:40.26:40,0,88	0/0:27,0:27:20.89:0,21,906	1/1:12,0:24:53.10:265,53,0	0/1:16,0:16:11.79:51,0,12	./.
chr10	88390654	.	CT	C	8032.03	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=20.026;DP=701;FS=4.986;HRun=2;HaplotypeScore=131.4459;InbreedingCoeff=0.9801;MQ=91.39;MQ0=0;MQRankSum=-8.662;QD=34.18;ReadPosRankSum=2.629;VQSLOD=4.2820;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:64:99:0,190,2829	0/0:7,0:7:21.04:0,21,281	0/0:36,0:36:94.27:0,94,1528	0/0:29,0:29:83.70:0,84,1148	0/0:21,0:21:63.16:0,63,865	1/1:0,23:23:66.21:856,66,0	1/1:2,21:23:51.17:662,51,0	1/1:0,21:21:63.20:818,63,0	0/0:22,0:22:66.22:0,66,988	0/0:34,0:34:99:0,99,1457	0/0:16,0:16:45.15:0,45,674	1/1:2,23:25:69.22:896,69,0	0/0:27,0:27:81.26:0,81,1194	1/1:1,32:33:90.29:1168,90,0	1/1:1,23:24:63.20:818,63,0	0/0:22,0:22:66.22:0,66,989	0/0:24,0:24:69.21:0,69,1011	1/1:0,17:17:42.14:543,42,0	0/0:21,0:21:60.12:0,60,831	0/0:38,0:38:99:0,111,1662	1/1:0,31:31:78.69:995,79,0	1/1:1,16:17:42.14:545,42,0	0/0:22,0:22:63.20:0,63,924	0/0:38,0:38:99:0,114,1709	0/0:22,0:22:66.14:0,66,919	1/1:1,18:19:12.20:654,12,0	0/0:23,0:23:69.22:0,69,1011	1/1:0,2:2:6.02:78,6,0
chr10	88390978	.	GC	G	10865.20	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=20.113;DP=728;FS=1.943;HRun=1;HaplotypeScore=127.3635;InbreedingCoeff=0.9956;MQ=88.70;MQ0=0;MQRankSum=-5.031;QD=38.26;ReadPosRankSum=2.551;VQSLOD=4.5749;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,166,2625	0/0:5,0:5:15.05:0,15,240	0/0:33,1:34:90.11:0,90,1513	0/0:35,0:35:99:0,102,1517	0/0:22,0:22:63.21:0,63,1006	1/1:0,23:23:57.16:776,57,0	1/1:1,33:34:99:1364,101,0	1/1:0,26:26:75.23:1032,75,0	0/0:23,0:23:69.19:0,69,1053	0/0:33,0:33:96.33:0,96,1533	0/0:17,0:17:51.17:0,51,814	1/1:0,25:25:72.24:1007,72,0	0/0:20,0:20:60.20:0,60,958	1/1:0,34:34:96.32:1342,96,0	1/1:0,24:24:63.21:881,63,0	0/0:30,0:30:90.29:0,90,1406	0/0:32,0:32:96.30:0,96,1508	1/1:0,15:15:42.14:587,42,0	0/0:31,0:31:90.15:0,90,1373	0/0:20,0:20:57.18:0,57,887	1/1:0,40:40:99:1570,114,0	1/1:0,20:20:54.14:732,54,0	0/0:15,0:15:42.13:0,42,647	0/0:37,0:37:99:0,111,1772	1/1:0,21:21:51.17:713,51,0	1/1:0,17:17:48.14:651,48,0	0/0:34,0:34:99:0,102,1606	1/1:0,5:5:15.05:210,15,0
chr10	88392443	.	G	GAGAC	9855.13	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-12.854;DP=687;FS=2.095;HRun=0;HaplotypeScore=125.9645;InbreedingCoeff=0.9969;MQ=92.63;MQ0=0;MQRankSum=-3.557;QD=51.33;ReadPosRankSum=2.327;VQSLOD=6.1236;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,111,1899	0/0:12,0:12:33.10:0,33,550	0/0:26,0:26:53.85:0,54,848	0/0:34,0:34:70.89:0,71,1166	1/1:4,11:18:27.09:689,27,0	0/0:27,0:27:69.19:0,69,1125	0/0:25,0:25:63.22:0,63,1099	0/0:30,0:30:78.27:0,78,1358	0/0:21,0:21:57.20:0,57,999	0/0:26,0:26:63.19:0,63,1052	0/0:14,0:14:33.11:0,33,575	0/0:22,0:22:51.14:0,51,862	1/1:11,22:33:69.24:1736,69,0	0/0:25,0:25:72.25:0,72,1256	0/0:30,0:30:81.26:0,81,1391	1/1:4,23:28:19.18:1708,19,0	0/0:31,0:31:64.86:0,65,1351	0/0:15,0:15:33.11:0,33,577	1/1:10,7:18:36.11:848,36,0	1/1:11,19:30:51.17:1299,51,0	0/0:27,0:27:66.21:0,66,1129	0/0:18,0:18:48.14:0,48,777	1/1:4,11:15:23.66:612,24,0	1/1:1,23:24:66.23:1684,66,0	0/0:29,0:29:81.28:0,81,1420	0/0:30,0:30:75.23:0,75,1237	1/1:9,15:26:51.18:1279,51,0	0/0:10,0:10:17.99:0,18,201
chr10	88393155	.	TC	T	1604.31	PASS	AB=0.548;AC=7;AF=0.125;AN=56;BaseQRankSum=8.979;DP=587;FS=2.466;HRun=3;HaplotypeScore=69.8740;InbreedingCoeff=0.8341;MQ=92.70;MQ0=0;MQRankSum=-3.820;QD=23.94;ReadPosRankSum=-0.860;VQSLOD=2.7651;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.88:0,97,1335	0/0:7,0:7:18.05:0,18,228	0/0:31,0:31:75.44:0,75,917	0/0:30,0:29:53.14:0,53,784	0/0:16,0:16:42.14:0,42,579	0/0:25,0:25:69.22:0,69,935	0/0:28,0:28:81.26:0,81,1104	1/1:4,17:21:54.05:633,54,0	0/0:24,0:24:72.20:0,72,945	0/0:11,0:11:33.10:0,33,442	0/0:15,0:15:42.10:0,42,531	0/0:27,0:27:78.26:0,78,1075	0/0:20,0:20:60.17:0,60,787	0/0:24,0:24:69.20:0,69,920	0/0:28,0:28:81.24:0,81,1088	0/0:21,0:21:60.17:0,60,794	0/0:27,0:27:72.02:0,72,926	0/0:29,0:29:84.24:0,84,1119	0/0:16,0:16:41.02:0,41,544	0/0:15,0:15:45.11:0,45,585	1/1:2,15:17:30.09:370,30,0	0/0:15,0:15:42.14:0,42,576	0/0:16,0:16:42.12:0,42,552	0/0:25,0:25:75.17:0,75,951	0/0:16,0:16:42.14:0,42,580	0/1:3,14:17:38.09:400,0,38	0/0:20,0:20:57.13:0,57,717	1/1:0,12:12:30.03:349,30,0
chr10	88393563	.	AG	A	922.57	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=9.360;DP=589;FS=54.935;HRun=4;HaplotypeScore=75.9383;InbreedingCoeff=0.9941;MQ=87.55;MQ0=0;MQRankSum=-9.273;QD=28.83;ReadPosRankSum=-0.451;VQSLOD=-0.6046;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.23:0,75,1030	0/0:15,0:15:45.14:0,45,615	0/0:25,0:25:62.95:0,63,790	0/0:24,0:24:71.77:0,72,929	0/0:31,0:31:90.18:0,90,1199	0/0:18,0:18:54.18:0,54,756	0/0:22,0:22:63.19:0,63,850	1/1:2,14:16:45.10:518,45,0	0/0:24,0:24:72.24:0,72,1007	0/0:33,0:33:93.29:0,93,1263	0/0:21,0:21:63.16:0,63,842	0/0:16,0:16:48.14:0,48,652	0/0:22,0:22:63.21:0,63,882	0/0:16,0:16:48.14:0,48,640	0/0:30,0:30:90.29:0,90,1244	0/0:17,0:17:45.14:0,45,613	0/0:22,0:22:63.21:0,63,879	0/0:17,0:17:48.16:0,48,671	0/0:20,0:20:54.16:0,54,725	0/0:31,0:31:87.26:0,87,1181	./.	0/0:26,0:26:72.24:0,72,1008	0/0:24,0:24:72.24:0,72,1006	0/0:23,0:23:66.22:0,66,924	0/0:24,0:24:69.22:0,69,949	1/1:0,11:11:33.10:395,33,0	0/0:26,0:25:78.26:0,78,1091	1/1:2,3:5:14.98:149,15,0
chr10	88393627	.	A	AAGTAC	1344.35	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=-0.545;DP=647;FS=1.870;HRun=0;HaplotypeScore=135.5029;InbreedingCoeff=0.9552;MQ=86.85;MQ0=0;MQRankSum=-5.895;QD=39.54;ReadPosRankSum=-1.922;VQSLOD=3.5661;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.22:0,75,1417	0/0:17,0:17:45.15:0,45,914	0/0:25,0:25:44.16:0,44,783	0/0:21,0:21:41.56:0,42,711	0/0:25,0:25:63.22:0,63,1279	0/0:27,0:27:78.27:0,78,1573	0/0:24,0:24:72.25:0,72,1462	1/1:8,10:22:36.02:842,36,0	0/0:23,0:23:63.22:0,63,1259	0/0:30,0:30:75.25:0,75,1488	0/0:24,0:24:60.21:0,60,1196	0/0:18,0:18:54.19:0,54,1096	0/0:19,0:19:57.18:0,57,1111	0/0:24,0:24:66.23:0,66,1340	0/0:33,0:33:93.32:0,93,1838	0/0:28,0:28:84.28:0,84,1669	0/0:24,0:24:60.21:0,60,1217	0/0:23,0:23:60.18:0,60,1180	0/0:20,0:20:60.17:0,60,1126	0/0:30,0:30:78.27:0,78,1576	./.	0/0:33,0:33:78.27:0,78,1542	0/0:23,0:23:60.21:0,60,1196	0/0:27,0:27:72.25:0,72,1461	0/0:25,0:25:72.25:0,72,1453	1/1:3,6:9:15.05:453,15,0	0/0:41,0:41:99:0,114,2304	1/1:0,3:3:6.02:181,6,0
chr10	88393683	.	CT	C	408.22	PASS	AB=0.538;AC=7;AF=0.125;AN=56;BaseQRankSum=6.287;DP=609;FS=5.088;HRun=1;HaplotypeScore=84.4419;InbreedingCoeff=0.7237;MQ=91.54;MQ0=0;MQRankSum=-5.024;QD=25.51;ReadPosRankSum=-1.081;VQSLOD=3.1510;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.28:0,81,1284	0/0:6,0:6:18.06:0,18,288	0/0:26,0:25:69.18:0,69,1001	0/0:27,0:27:57.33:0,57,1042	0/0:31,0:31:93.30:0,93,1463	0/0:24,0:24:69.24:0,69,1102	0/0:24,0:24:54.16:0,54,814	1/1:3,3:6:15.01:182,15,0	0/0:20,0:20:60.20:0,60,954	0/0:46,0:46:99:0,138,2184	0/0:17,0:17:51.17:0,51,814	0/0:20,0:20:57.18:0,57,888	0/0:25,0:25:72.25:0,72,1147	0/0:22,0:22:66.21:0,66,1032	0/0:26,0:26:78.27:0,78,1244	0/0:25,0:25:75.22:0,75,1119	0/0:20,0:20:60.16:0,60,887	0/0:27,0:27:78.22:0,78,1192	0/0:18,0:18:51.16:0,51,790	0/0:28,0:28:84.28:0,84,1310	1/1:0,2:2:6.02:84,6,0	0/0:24,0:24:72.25:0,72,1147	0/0:34,0:34:99:0,99,1528	0/0:27,0:27:81.26:0,81,1253	0/0:24,0:24:72.20:0,72,1081	0/1:1,6:7:26.91:230,0,27	0/0:25,0:25:75.24:0,75,1168	1/1:0,1:1:3.01:42,3,0
chr10	88393729	.	CT	C	7861.91	PASS	AB=0.522;AC=21;AF=0.375;AN=56;BaseQRankSum=11.708;DP=703;FS=5.623;HRun=3;HaplotypeScore=79.9214;InbreedingCoeff=0.9298;MQ=83.68;MQ0=0;MQRankSum=-3.528;QD=34.63;ReadPosRankSum=1.985;VQSLOD=5.5334;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.23:0,75,1082	0/0:12,0:12:36.12:0,36,537	0/0:23,0:22:63.17:0,63,845	0/0:22,0:21:54.16:0,54,752	0/0:34,0:34:99:0,102,1528	1/1:0,30:30:81.26:1051,81,0	1/1:0,25:25:48.16:623,48,0	1/1:0,25:25:72.19:912,72,0	0/0:28,0:28:81.26:0,81,1178	0/0:50,0:50:99:0,150,2210	0/0:19,0:19:57.18:0,57,830	1/1:0,18:18:51.17:662,51,0	0/0:29,0:29:85.46:0,85,1140	1/1:1,16:17:51.16:650,51,0	1/1:0,33:33:96.31:1246,96,0	0/0:24,0:24:72.24:0,72,1078	0/0:24,0:24:69.23:0,69,1018	1/1:0,25:25:69.22:895,69,0	0/0:20,0:20:60.18:0,60,847	0/0:35,0:35:99:0,102,1506	1/1:1,5:6:15.05:194,15,0	1/1:0,27:27:75.24:968,75,0	0/0:39,0:39:99:0,114,1663	0/0:32,0:32:93.31:0,93,1363	0/0:29,0:28:84.28:0,84,1256	0/1:1,11:12:8.86:388,0,9	0/0:31,0:31:93.31:0,93,1390	1/1:0,9:9:21.05:272,21,0
chr10	88393789	.	AATT	A	133.65	PASS	AB=0.851;AC=3;AF=0.056;AN=54;BaseQRankSum=3.505;DP=739;FS=6.531;HRun=0;HaplotypeScore=119.9492;InbreedingCoeff=-0.0587;MQ=76.37;MQ0=0;MQRankSum=-4.162;QD=3.34;ReadPosRankSum=-1.664;VQSLOD=0.9658;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.28:0,81,1964	0/0:18,0:18:54.19:0,54,1287	0/0:18,0:18:54.19:0,54,1223	0/0:13,0:13:35.63:0,36,601	0/0:28,0:28:84.28:0,84,2010	0/0:29,0:29:84.29:0,84,2037	0/0:27,0:27:72.25:0,72,1772	0/1:11,7:18:99:184,0,551	0/0:32,0:32:96.32:0,96,2270	0/0:35,0:35:99:0,105,2511	0/0:21,0:21:63.22:0,63,1520	0/0:23,0:23:69.24:0,69,1683	0/0:26,0:26:78.27:0,78,1920	0/0:32,0:32:96.33:0,96,2337	0/0:47,0:47:99:0,135,3295	0/0:43,0:43:99:0,129,3060	0/0:32,0:32:96.33:0,96,2333	0/0:27,0:27:78.27:0,78,1898	0/0:19,0:19:57.20:0,57,1368	0/0:42,0:41:99:0,126,3042	./.	0/0:37,0:37:99:0,111,2716	0/0:33,0:33:99:0,99,2412	0/0:31,0:31:93.32:0,93,2274	0/0:20,0:19:60.21:0,60,1444	0/1:11,1:12:22.76:23,0,390	0/0:37,0:37:99:0,111,2708	0/1:9,1:10:25.76:26,0,466
chr10	88393792	.	T	TTGACCTCCGAAGCAA	5177.94	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.353;DP=752;FS=4.378;HRun=0;HaplotypeScore=309.4602;InbreedingCoeff=0.9677;MQ=78.72;MQ0=0;MQRankSum=-9.342;QD=110.17;ReadPosRankSum=-1.937;VQSLOD=3.6500;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.27:0,84,3479	0/0:17,0:17:42.14:0,42,1605	0/0:19,0:19:57.20:0,57,2155	0/0:18,0:18:36.09:0,36,986	0/0:27,0:27:78.24:0,78,3073	0/0:29,0:29:81.28:0,81,3373	0/0:28,0:28:72.25:0,72,2771	1/1:20,0:20:33.11:1412,33,0	0/0:34,0:34:90.28:0,90,3536	0/0:35,0:35:99:0,105,4185	0/0:21,0:21:60.21:0,60,2508	0/0:23,0:23:66.19:0,66,2671	0/0:27,0:27:72.24:0,72,2947	0/0:32,0:32:93.32:0,93,3706	0/0:47,0:47:99:0,126,5240	0/0:44,0:44:99:0,129,5119	0/0:31,0:31:90.31:0,90,3948	0/0:27,0:27:72.25:0,72,3180	0/0:18,0:18:54.12:0,54,2169	0/0:42,0:41:99:0,123,5020	1/1:4,0:4:6.02:439,6,0	0/0:38,0:38:99:0,108,4159	0/0:32,0:32:90.31:0,90,3769	0/0:31,0:31:93.28:0,93,3783	0/0:19,0:18:57.20:0,57,2527	1/1:4,7:15:35.10:2017,35,0	0/0:38,0:38:99:0,114,4820	1/1:8,0:8:18.06:1310,18,0
chr10	88393876	.	TGA	T	1452.66	PASS	AB=0.571;AC=5;AF=0.093;AN=54;BaseQRankSum=10.406;DP=746;FS=31.036;HRun=0;HaplotypeScore=102.8670;InbreedingCoeff=0.8117;MQ=80.87;MQ0=0;MQRankSum=-9.867;QD=25.49;ReadPosRankSum=-0.880;VQSLOD=1.9626;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.32:0,93,1732	0/0:13,0:13:39.13:0,39,719	0/0:25,0:25:58.35:0,58,1169	0/0:23,0:23:60.14:0,60,1035	0/0:33,0:33:99:0,99,1846	0/0:30,0:30:90.31:0,90,1675	0/0:26,0:26:75.26:0,75,1393	1/1:4,16:20:48.16:685,48,0	0/0:33,0:33:99:0,99,1847	0/0:33,0:33:99:0,99,1847	0/0:16,0:16:48.16:0,48,891	0/0:31,0:31:93.32:0,93,1695	0/0:25,0:25:75.24:0,75,1372	0/0:35,0:35:99:0,105,1952	0/0:37,0:37:99:0,99,1791	0/0:45,0:45:99:0,135,2505	0/0:27,0:27:78.27:0,78,1461	0/0:19,0:18:57.16:0,57,972	0/0:22,0:22:66.23:0,66,1224	0/0:40,0:39:99:0,114,2030	1/1:1,16:17:20.62:300,21,0	0/0:30,0:30:81.28:0,81,1500	0/0:23,0:23:66.23:0,66,1218	0/0:34,0:34:99:0,102,1899	0/0:21,0:21:57.20:0,57,1051	0/1:5,15:20:8.06:596,0,8	0/0:35,0:34:99:0,102,1838	./.
chr10	88394172	.	C	CG	6256.89	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=17.688;DP=946;FS=0.336;HRun=0;HaplotypeScore=110.3686;InbreedingCoeff=0.9997;MQ=82.43;MQ0=0;MQRankSum=-3.497;QD=42.28;ReadPosRankSum=-0.089;VQSLOD=4.3784;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,163,2265	0/0:19,0:19:57.19:0,57,796	0/0:25,0:25:75.25:0,75,1031	0/0:31,0:31:81.69:0,82,1071	0/0:27,0:27:72.24:0,72,1002	0/0:30,0:29:90.26:0,90,1237	0/0:30,0:30:90.27:0,90,1223	1/1:2,35:37:99:1534,102,0	0/0:40,0:40:99:0,120,1658	0/0:37,0:37:99:0,108,1511	0/0:19,0:19:57.18:0,57,780	0/0:43,0:43:99:0,129,1801	0/0:32,0:32:96.32:0,96,1343	0/0:39,0:39:99:0,117,1635	0/0:71,0:71:99:0,208,2843	0/0:42,0:42:99:0,126,1730	0/0:23,0:23:69.22:0,69,949	0/0:23,0:23:66.22:0,66,923	0/0:19,0:19:57.14:0,57,718	0/0:33,0:33:93.27:0,93,1250	1/1:2,58:60:99:2538,159,0	0/0:30,0:30:90.30:0,90,1257	0/0:23,0:23:69.23:0,69,964	0/0:59,0:59:99:0,175,2416	0/0:19,0:19:57.19:0,57,797	1/1:3,39:42:75.47:1754,75,0	0/0:30,0:30:87.22:0,87,1158	1/1:0,9:9:27.09:431,27,0
chr10	88394896	.	C	CA	6623.71	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=4.814;DP=570;FS=2.573;HRun=9;HaplotypeScore=154.3339;InbreedingCoeff=0.9530;MQ=58.08;MQ0=1;MQRankSum=-3.965;QD=18.61;ReadPosRankSum=0.819;VQSLOD=3.3643;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:62.95:0,63,547	0/0:12,0:12:23.97:0,24,205	0/0:8,0:8:14.97:0,15,124	0/0:6,1:7:1.79:0,2,44	1/1:5,1:19:37.50:208,37,0	1/1:4,32:36:96.19:1035,96,0	1/1:4,13:17:36.06:385,36,0	0/0:51,0:51:99:0,120,1036	1/1:7,1:21:37.10:204,37,0	0/0:20,0:20:50.97:0,51,440	0/0:25,0:25:59.96:0,60,521	1/1:3,23:26:63.13:683,63,0	1/1:3,1:19:45.41:226,45,0	1/1:2,21:24:60:644,60,0	1/1:1,34:35:99:1082,99,0	1/1:2,1:24:62.66:331,63,0	0/0:14,0:14:17.96:0,18,156	1/1:0,7:7:18.05:199,18,0	1/1:7,1:24:54.23:295,54,0	1/1:2,0:13:25.81:138,26,0	0/0:18,1:19:11.80:0,12,331	1/1:1,17:19:47.96:512,48,0	1/1:3,0:6:11.52:67,12,0	1/1:3,1:19:31.36:161,31,0	1/1:5,0:14:17.04:85,17,0	0/0:24,0:24:65.98:0,66,573	1/1:5,3:31:68.50:369,69,0	0/0:8,0:8:20.99:0,21,182
chr10	88395169	.	GGAGA	G	417.58	PASS	AB=0.919;AC=10;AF=0.294;AN=34;BaseQRankSum=-0.066;DP=306;FS=1.799;HRun=0;HaplotypeScore=58.0111;InbreedingCoeff=0.2920;MQ=63.22;MQ0=15;MQRankSum=-0.373;QD=3.39;ReadPosRankSum=-0.987;VQSLOD=1.5640;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,6:18:12.50:189,13,0	1/1:9,0:9:5.96:54,6,0	./.	0/1:39,0:12:0:0,0,0	0/0:5,0:5:3.01:0,3,46	0/0:10,0:10:5.99:0,6,50	0/0:9,0:9:5.93:0,6,66	0/0:9,0:8:3.01:0,3,35	./.	0/1:12,4:17:37.04:129,0,37	./.	0/0:8,0:8:6.01:0,6,72	./.	./.	0/0:13,0:12:3.01:0,3,41	0/0:7,0:7:3.01:0,3,47	1/1:16,2:18:8.94:111,9,0	0/0:4,0:5:3.48:0,3,48	0/0:5,0:5:0.47:0,0,1	./.	./.	./.	./.	0/1:7,0:7:0:0,0,0	0/1:11,1:12:7.31:41,0,7	./.	./.	0/0:6,0:5:0.47:0,0,1
chr10	88395267	.	AGAAAGTAGGAGGAGAAGGAGGAAGAGGAG	A	1206.90	PASS	AB=1.000;AC=17;AF=0.327;AN=52;BaseQRankSum=2.424;DP=243;FS=0.870;HRun=0;HaplotypeScore=132.7499;InbreedingCoeff=0.0660;MQ=53.23;MQ0=20;MQRankSum=-5.117;QD=15.09;ReadPosRankSum=-3.099;VQSLOD=1.4934;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:21.26:21,0,4244	0/0:10,0:10:27.09:0,27,2016	0/0:26,0:2:5.25:0,5,23	0/0:26,0:7:3.95:0,4,27	0/1:3,0:3:32.33:32,0,78	1/1:0,7:5:9.03:548,9,0	0/0:2,0:2:2.94:0,3,18	0/0:11,0:5:0.43:0,0,1	0/1:7,0:6:99:149,0,340	0/0:25,0:25:75.26:0,75,5365	0/0:13,0:13:36.12:0,36,2959	1/1:3,0:2:5.95:216,6,0	0/1:9,0:9:99:108,0,260	1/1:1,0:1:3.01:49,3,0	./.	0/0:5,0:4:4.02:0,4,54	0/0:15,0:15:45.15:0,45,3380	./.	0/0:4,0:2:3:0,3,48	0/0:6,0:4:2.73:0,3,54	0/0:6,0:6:4.60:0,5,54	1/1:0,4:4:3.01:140,3,0	0/0:6,0:6:4.46:0,4,164	0/1:4,0:4:52.47:57,0,52	0/1:13,0:13:14.59:15,0,104	1/1:3,0:1:1.55:4,2,0	0/1:5,0:4:12.21:12,0,86	0/0:1,0:1:3.01:0,3,73
chr10	88395290	.	AGAGGAG	A	272.49	PASS	AB=0.925;AC=15;AF=0.300;AN=50;BaseQRankSum=5.368;DP=266;FS=4.285;HRun=0;HaplotypeScore=73.8765;InbreedingCoeff=0.1631;MQ=52.54;MQ0=12;MQRankSum=-2.564;QD=2.84;ReadPosRankSum=-5.021;VQSLOD=0.0798;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.09:0,57,1610	0/0:10,0:10:30.10:0,30,929	0/0:32,0:6:18.01:0,18,355	0/1:28,0:6:7.33:7,0,31	0/1:8,1:8:21.06:61,0,21	1/1:10,0:7:14.93:141,15,0	0/0:3,0:2:3.01:0,3,75	0/0:7,0:5:11.79:0,12,101	0/0:7,0:6:14.91:0,15,144	0/0:24,0:24:69.23:0,69,1806	0/0:15,0:15:45.15:0,45,1323	1/1:2,0:1:3.01:49,3,0	0/1:9,0:9:29.21:29,0,193	./.	./.	0/0:5,0:4:9.03:0,9,183	0/0:18,0:18:54.18:0,54,1488	./.	0/0:3,0:2:1.37:0,1,71	1/1:6,0:4:3.44:20,3,0	0/0:4,0:4:9.03:0,9,280	1/1:5,0:4:2.22:7,2,0	0/1:3,0:3:10.91:11,0,96	0/1:6,2:8:26.53:54,0,27	0/0:13,0:13:8.94:0,9,207	0/1:9,0:5:0.63:1,0,9	0/1:5,2:6:36.72:37,0,124	0/0:3,0:3:7.66:0,8,29
chr10	88395296	.	G	GGAGGAAGAAGAA	2131.11	PASS	AB=1.000;AC=30;AF=0.577;AN=52;BaseQRankSum=6.559;DP=271;FS=22.382;HRun=0;HaplotypeScore=95.3322;InbreedingCoeff=0.2321;MQ=50.69;MQ0=15;MQRankSum=-6.861;QD=17.05;ReadPosRankSum=-2.731;VQSLOD=-0.1180;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:48.95:0,49,1315	0/0:10,0:10:30.02:0,30,892	0/0:33,0:6:14.83:0,15,251	0/0:24,0:5:0.48:0,0,16	0/1:9,0:8:4.79:100,0,5	1/1:10,0:7:15.05:283,15,0	1/1:3,0:2:2.96:19,3,0	1/1:8,0:5:9.49:146,9,0	0/1:6,0:4:9.31:9,0,54	0/0:25,0:25:72.11:0,72,1389	0/0:15,0:15:45.11:0,45,1266	1/1:2,0:1:3.01:56,3,0	0/1:9,0:9:56.43:56,0,92	./.	1/1:8,0:7:5.86:37,6,0	0/1:5,0:4:13.77:81,0,14	0/0:19,0:19:50.98:0,51,1029	./.	0/1:3,0:2:15.75:40,0,16	1/1:5,0:3:2.99:23,3,0	1/1:4,0:4:8.85:56,9,0	1/1:5,0:4:3.01:66,3,0	0/1:4,0:4:7.79:123,0,8	0/1:9,0:9:7.76:79,0,8	1/1:1,10:16:12.04:587,12,0	1/1:9,0:5:15.05:222,15,0	0/1:7,0:6:3.86:239,0,4	1/1:3,0:3:0.37:77,0,0
chr10	88395335	.	A	AAGGAGG	3762.91	PASS	AB=0.838;AC=35;AF=0.673;AN=52;BaseQRankSum=7.340;DP=346;FS=57.759;HRun=0;HaplotypeScore=86.2004;InbreedingCoeff=0.5847;MQ=48.35;MQ0=19;MQRankSum=-6.575;QD=21.50;ReadPosRankSum=-0.151;VQSLOD=0.8806;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:51.13:0,51,1031	0/0:12,0:12:21.06:0,21,355	0/0:45,0:11:23.16:0,23,407	0/0:30,0:7:4.92:0,5,120	1/1:12,0:12:9.60:29,10,0	1/1:8,5:9:12.04:347,12,0	1/1:1,2:3:6.02:202,6,0	./.	1/1:7,0:6:4.35:13,4,0	0/0:21,0:21:57.19:0,57,1192	0/0:19,0:19:51.16:0,51,1012	1/1:2,3:4:9.03:303,9,0	1/1:6,0:6:7.68:21,8,0	1/1:2,4:6:17.93:482,18,0	1/1:3,6:9:15.05:501,15,0	1/1:5,0:4:1.83:3,2,0	0/0:16,0:16:27.58:0,28,781	./.	1/1:3,0:2:1.47:18,1,0	1/1:15,0:12:10:52,10,0	1/1:4,0:4:11.97:121,12,0	1/1:5,4:8:15:355,15,0	1/1:8,0:8:7.24:24,7,0	0/1:20,0:20:21.13:21,0,39	0/1:12,0:13:3.88:4,0,36	0/1:5,12:13:32.36:804,0,32	1/1:14,0:13:8.90:34,9,0	1/1:2,4:6:15.04:431,15,0
chr10	88395341	.	G	GAGA	4941.35	PASS	AB=1.000;AC=31;AF=0.596;AN=52;BaseQRankSum=1.225;DP=345;FS=84.257;HRun=0;HaplotypeScore=62.7714;InbreedingCoeff=0.4559;MQ=49.17;MQ0=15;MQRankSum=-3.339;QD=23.53;ReadPosRankSum=4.860;VQSLOD=1.3579;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.16:0,57,897	0/0:10,0:10:26.28:0,26,358	0/0:44,0:12:35.69:0,36,484	0/1:31,0:7:0.53:1,0,99	1/1:2,10:12:30.06:640,30,0	1/1:12,0:8:1.73:36,2,0	0/1:4,0:4:11.03:32,0,11	./.	1/1:0,7:6:18.06:414,18,0	0/0:20,0:20:60.20:0,60,1000	0/0:18,0:18:54.17:0,54,870	0/1:6,0:5:11.78:46,0,12	1/1:0,6:7:18.06:413,18,0	0/1:8,0:8:14.11:70,0,14	1/1:9,0:9:14.86:102,15,0	1/1:2,3:5:15.03:258,15,0	0/0:15,0:15:42.13:0,42,683	./.	1/1:1,3:3:8.98:135,9,0	1/1:1,13:13:27.04:506,27,0	0/0:4,0:4:11.95:0,12,94	0/1:9,0:8:18.37:50,0,18	1/1:0,8:8:21.06:482,21,0	1/1:1,23:24:35.72:873,36,0	0/1:13,0:13:6.69:49,0,7	0/1:17,0:13:51.92:89,0,52	1/1:0,11:11:30.10:626,30,0	1/1:6,0:6:14.84:119,15,0
chr10	88395358	.	T	TGAA	1753.95	PASS	AB=0.850;AC=12;AF=0.222;AN=54;BaseQRankSum=5.798;DP=383;FS=11.416;HRun=0;HaplotypeScore=82.4139;InbreedingCoeff=0.7770;MQ=53.00;MQ0=13;MQRankSum=-8.701;QD=29.73;ReadPosRankSum=-1.602;VQSLOD=3.0164;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:48.13:0,48,650	0/0:10,0:10:21.06:0,21,272	0/0:47,0:12:14.97:0,15,205	0/0:37,0:10:14.37:0,14,105	0/0:15,0:15:31.32:0,31,311	1/1:7,6:9:19.31:323,19,0	0/1:4,3:7:16.87:247,0,17	0/0:7,0:5:15.05:0,15,212	0/0:8,0:7:16.76:0,17,125	0/0:19,0:19:45.15:0,45,639	0/0:19,0:19:39.09:0,39,521	1/1:2,4:5:15.05:291,15,0	0/0:8,0:8:15.29:0,15,116	1/1:1,8:9:27.09:490,27,0	1/1:2,5:7:15.05:279,15,0	0/0:7,0:7:21.06:0,21,268	0/0:17,0:17:42.06:0,42,523	./.	0/1:7,0:6:3.95:4,0,69	0/0:13,0:12:30.01:0,30,306	0/0:9,0:9:18.06:0,18,237	1/1:6,4:9:16.87:294,17,0	0/0:9,0:9:18.42:0,18,194	0/0:25,0:25:34.01:0,34,301	0/0:8,0:10:17.93:0,18,139	0/0:19,0:17:38.90:0,39,437	0/0:15,0:14:37.65:0,38,342	0/0:8,0:8:10.91:0,11,77
chr10	88395384	.	GA	G	1519.35	PASS	AB=0.875;AC=14;AF=0.250;AN=56;BaseQRankSum=7.336;DP=422;FS=12.898;HRun=1;HaplotypeScore=83.5680;InbreedingCoeff=0.8003;MQ=68.86;MQ0=7;MQRankSum=-8.324;QD=14.61;ReadPosRankSum=0.035;VQSLOD=1.9367;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.17:0,66,994	0/0:6,0:6:15.05:0,15,234	0/0:59,0:26:41.55:0,42,524	0/1:54,0:17:11.70:12,0,441	0/0:18,0:18:51.16:0,51,774	1/1:0,9:8:21.02:269,21,0	1/1:1,7:8:24.04:312,24,0	0/0:11,0:11:33.11:0,33,509	0/0:8,0:8:21:0,21,277	0/0:20,0:20:60.16:0,60,854	0/0:15,0:15:45.14:0,45,678	1/1:0,6:6:17.97:203,18,0	0/0:7,0:7:18.06:0,18,277	1/1:1,8:9:26.95:309,27,0	1/1:0,8:8:24.08:330,24,0	0/0:10,0:10:27.09:0,27,422	0/0:16,0:16:42.14:0,42,641	0/1:2,1:3:23.71:66,0,24	0/0:11,0:10:30.10:0,30,456	0/0:12,0:12:33.11:0,33,502	0/0:14,0:14:39.08:0,39,567	1/1:0,6:6:15.05:209,15,0	0/0:8,0:8:21.07:0,21,315	0/0:24,0:24:48.16:0,48,743	0/0:12,0:12:27.09:0,27,422	0/0:19,0:19:54.18:0,54,831	0/0:14,0:13:36.12:0,36,556	0/0:11,0:11:15.05:0,15,232
chr10	88395425	.	G	GGA	4628.69	PASS	AB=0.767;AC=36;AF=0.643;AN=56;BaseQRankSum=-2.794;DP=381;FS=24.783;HRun=0;HaplotypeScore=66.5635;InbreedingCoeff=0.3459;MQ=65.03;MQ0=12;MQRankSum=-0.676;QD=14.74;ReadPosRankSum=0.966;VQSLOD=2.6410;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:47.98:0,48,574	0/0:6,0:6:12.04:0,12,149	0/1:46,0:14:21.34:21,0,103	0/1:64,0:21:9.71:10,0,152	1/1:4,9:13:14.74:226,15,0	1/1:9,2:9:15.03:216,15,0	1/1:5,6:10:24.08:376,24,0	1/1:5,15:18:42.14:665,42,0	1/1:0,5:5:6.02:99,6,0	0/0:10,0:11:11.38:0,11,216	0/0:6,0:6:15.05:0,15,187	1/1:1,2:3:6.02:99,6,0	1/1:4,1:5:5.98:69,6,0	1/1:2,4:6:12.04:190,12,0	1/1:2,5:7:18.06:296,18,0	1/1:3,9:13:9.03:148,9,0	0/0:16,0:16:26.96:0,27,438	0/1:4,2:6:2.33:91,0,2	0/1:3,4:8:59.96:128,0,60	1/1:5,2:7:9.03:143,9,0	0/1:9,8:16:5.34:400,0,5	1/1:4,3:7:12.04:182,12,0	0/1:5,5:10:3.59:261,0,4	0/1:12,6:18:15.66:351,0,16	0/0:8,0:8:21.07:0,21,261	0/1:7,5:12:8.90:395,0,9	1/1:2,7:8:12.04:192,12,0	1/1:12,1:13:2.34:69,2,0
chr10	88395432	.	GAGAGAGGAGGGGGA	G	4596.27	PASS	AB=0.999;AC=31;AF=0.554;AN=56;BaseQRankSum=-3.254;DP=393;FS=16.091;HRun=0;HaplotypeScore=118.3701;InbreedingCoeff=0.1603;MQ=60.28;MQ0=14;MQRankSum=-2.013;QD=14.50;ReadPosRankSum=1.916;VQSLOD=2.2670;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:48.46:0,48,985	0/0:6,0:6:12.04:0,12,149	0/1:50,0:14:19.29:19,0,105	0/1:72,0:19:6.30:6,0,173	0/1:17,0:16:99:176,0,403	1/1:10,0:8:15.05:247,15,0	1/1:8,0:7:24.08:417,24,0	1/1:19,0:17:40.38:662,40,0	0/1:6,0:6:89.91:90,0,129	0/0:13,0:13:20.41:0,20,773	0/0:7,0:7:18.06:0,18,350	1/1:3,0:3:6.02:99,6,0	0/0:6,0:6:5.75:0,6,246	1/1:5,0:5:12.04:190,12,0	1/1:6,1:7:18.06:312,18,0	1/1:12,0:12:4.60:97,5,0	0/0:16,0:16:38.18:0,38,1734	1/1:6,0:6:10.80:160,11,0	0/1:12,0:12:99:122,0,349	0/1:7,0:7:13.78:107,0,14	0/1:16,0:15:5.54:424,0,6	1/1:6,0:6:12.04:206,12,0	0/1:8,0:8:73.24:186,0,73	0/1:17,0:18:99:102,0,632	0/0:9,0:9:19.30:0,19,226	0/1:13,0:13:99:589,0,128	0/1:9,0:8:86.31:86,0,185	1/1:1,9:10:9.03:298,9,0
chr10	88395446	.	A	AGAG	421.87	PASS	AB=0.925;AC=8;AF=0.143;AN=56;BaseQRankSum=1.551;DP=384;FS=0.000;HRun=0;HaplotypeScore=69.8013;InbreedingCoeff=-0.1777;MQ=53.68;MQ0=19;MQRankSum=-2.575;QD=5.41;ReadPosRankSum=-3.785;VQSLOD=0.5972;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:47.88:0,48,770	0/0:5,0:5:12.04:0,12,206	0/0:55,0:10:14.71:0,15,195	0/0:76,0:16:19.95:0,20,303	0/0:14,0:13:33.09:0,33,558	0/1:9,0:8:70.85:244,0,71	0/1:10,0:9:77.01:77,0,278	0/1:14,0:11:9.95:10,0,506	0/0:10,0:9:18.06:0,18,308	0/0:14,0:14:39.13:0,39,676	0/0:7,0:6:18.06:0,18,308	0/1:2,3:4:64.49:64,0,76	0/0:5,0:5:15.05:0,15,277	0/0:4,0:4:9.03:0,9,114	0/1:7,0:7:6.89:7,0,251	0/0:11,0:11:12:0,12,187	0/0:15,0:16:31.28:0,31,751	0/0:4,0:4:11.51:0,12,130	0/0:12,0:12:30.10:0,30,516	0/0:4,0:4:11.96:0,12,179	0/1:12,4:16:31.44:31,0,327	0/1:7,0:7:29.77:30,0,209	0/0:7,0:7:18.06:0,18,278	0/0:16,0:16:11.81:0,12,586	0/0:5,0:5:15.05:0,15,263	0/1:9,0:9:89.99:90,0,341	0/0:11,0:10:15.05:0,15,234	0/0:10,0:10:8.92:0,9,92
chr10	88395654	.	AGG	A	5722.81	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.587;DP=636;FS=0.370;HRun=2;HaplotypeScore=72.5481;InbreedingCoeff=0.9893;MQ=80.45;MQ0=1;MQRankSum=-0.887;QD=40.88;ReadPosRankSum=4.702;VQSLOD=4.8013;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1985	0/0:11,0:11:33.11:0,33,670	0/0:18,0:18:54.18:0,54,1065	0/0:21,0:21:63.19:0,63,1206	0/0:25,0:25:72.25:0,72,1462	1/1:0,32:31:87.30:1418,87,0	1/1:0,26:26:75.26:1223,75,0	0/0:50,0:50:99:0,147,2899	0/0:16,0:16:48.16:0,48,954	0/0:20,1:21:63.21:0,63,1224	0/0:15,0:15:45.14:0,45,868	1/1:0,19:19:36.12:587,36,0	0/0:25,0:25:75.26:0,75,1521	1/1:0,17:17:45.15:734,45,0	1/1:1,25:26:63.22:1027,63,0	0/0:27,0:27:81.28:0,81,1646	0/0:30,0:30:90.31:0,90,1829	1/1:0,5:5:9.03:147,9,0	0/0:21,0:21:57.16:0,57,1073	0/0:20,0:19:54.19:0,54,1096	0/0:31,0:31:93.30:0,93,1851	1/1:0,15:15:36.12:587,36,0	0/0:16,0:16:45.14:0,45,876	0/0:19,0:19:54.14:0,54,1043	0/0:20,0:20:54.12:0,54,1054	0/0:38,0:38:99:0,111,2241	0/0:24,0:24:69.24:0,69,1401	0/0:15,0:15:45.08:0,45,800
chr10	88396187	.	GA	G	5200.24	PASS	AB=0.747;AC=25;AF=0.446;AN=56;BaseQRankSum=-2.074;DP=596;FS=3.530;HRun=11;HaplotypeScore=79.2255;InbreedingCoeff=0.7555;MQ=75.85;MQ0=0;MQRankSum=1.030;QD=16.20;ReadPosRankSum=3.226;VQSLOD=5.8691;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,1:13:11.45:0,11,327	0/0:8,0:8:21.05:0,21,224	0/0:14,1:15:2.56:0,3,223	0/1:14,1:15:37.27:37,0,155	1/1:4,24:28:62.82:510,63,0	0/0:14,0:28:62.03:0,62,393	0/0:3,0:22:47.11:0,47,251	0/1:20,11:32:14.43:263,0,14	0/0:2,0:18:28.41:0,28,142	0/0:17,1:18:14.44:0,14,348	0/0:28,1:29:47.54:0,48,711	0/0:7,0:18:40.68:0,41,227	1/1:7,15:22:41.93:344,42,0	0/0:9,0:16:37.39:0,37,222	0/0:4,0:23:35.60:0,36,192	1/1:3,15:18:41.94:345,42,0	0/0:27,0:30:72.04:0,72,743	0/0:1,0:13:22.86:0,23,115	0/1:5,14:19:4.83:296,0,5	1/1:6,29:35:33.69:633,34,0	1/1:4,21:25:53.93:443,54,0	0/0:6,0:24:48.56:0,49,261	1/1:3,18:21:50.93:419,51,0	1/1:1,10:11:23.97:197,24,0	1/1:5,18:23:53.90:443,54,0	1/1:6,26:32:48.91:608,49,0	1/1:7,28:35:74.87:614,75,0	1/1:4,1:5:5.99:49,6,0
chr10	88396530	.	AAG	A	9460.57	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=9.638;DP=677;FS=1.322;HRun=0;HaplotypeScore=100.1154;InbreedingCoeff=0.9997;MQ=81.93;MQ0=0;MQRankSum=-0.652;QD=39.58;ReadPosRankSum=1.920;VQSLOD=6.4524;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,108,1977	0/0:10,0:10:30.10:0,30,560	0/0:19,0:18:48.16:0,48,783	0/0:20,0:20:53.13:0,53,870	1/1:0,38:38:99:1653,114,0	0/0:31,0:31:93.32:0,93,1741	0/0:17,0:17:51.17:0,51,955	0/0:36,0:36:99:0,99,1816	0/0:19,0:19:54.19:0,54,1011	0/0:29,0:29:84.27:0,84,1511	0/0:23,0:23:69.22:0,69,1249	0/0:21,0:21:63.22:0,63,1180	1/1:1,31:32:77.94:1148,78,0	0/0:18,0:18:51.17:0,51,955	0/0:25,0:25:69.24:0,69,1291	1/1:0,22:22:66.22:972,66,0	0/0:26,0:26:75.26:0,75,1390	0/0:12,0:12:36.12:0,36,674	1/1:3,20:23:57.16:816,57,0	1/1:1,30:31:90.24:1274,90,0	0/0:31,0:31:90.31:0,90,1685	0/0:22,0:22:63.20:0,63,1137	1/1:0,19:19:54.18:795,54,0	1/1:1,25:26:66.18:948,66,0	1/1:0,23:23:63.21:928,63,0	0/0:27,0:27:78.26:0,78,1420	1/1:1,24:25:62.88:927,63,0	0/0:10,0:10:27.09:0,27,506
chr10	88397062	.	G	GT	8206.49	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=11.053;DP=655;FS=3.285;HRun=9;HaplotypeScore=87.4706;InbreedingCoeff=0.9654;MQ=64.60;MQ0=0;MQRankSum=0.575;QD=20.16;ReadPosRankSum=1.920;VQSLOD=5.5207;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.87:0,73,626	0/0:10,0:10:26.99:0,27,234	0/0:30,2:19:4.91:0,5,156	0/0:20,0:13:13.47:0,13,184	1/1:5,24:29:11.07:579,11,0	1/1:21,0:21:34.80:288,35,0	1/1:25,0:25:50.07:308,50,0	0/0:36,0:36:89.96:0,90,779	1/1:5,23:29:19.92:659,20,0	0/0:25,0:25:71.97:0,72,622	0/0:20,1:21:23.81:0,24,436	1/1:18,0:18:44.24:277,44,0	1/1:4,20:24:46.05:649,46,0	1/1:19,0:19:56.12:358,56,0	1/1:21,0:21:50.20:318,50,0	1/1:3,20:23:31.18:571,31,0	0/0:20,0:20:56.67:0,57,479	1/1:22,0:22:28.32:253,28,0	1/1:9,20:29:11.46:557,11,0	1/1:4,25:29:49.10:750,49,0	0/0:24,0:24:62.97:0,63,547	1/1:21,0:21:50.19:321,50,0	1/1:1,18:20:50.97:543,51,0	1/1:3,17:20:39.58:432,40,0	1/1:2,26:28:62.53:672,63,0	0/0:25,0:25:65.97:0,66,570	1/1:3,26:29:40.13:671,40,0	0/0:7,0:7:18:0,18,156
chr10	88397063	.	T	TG	5629.62	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=4.218;DP=659;FS=1.717;HRun=1;HaplotypeScore=96.8925;InbreedingCoeff=0.3363;MQ=66.02;MQ0=0;MQRankSum=0.028;QD=13.80;ReadPosRankSum=6.105;VQSLOD=4.1895;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:67.92:0,68,1000	0/0:11,0:11:30.09:0,30,391	0/0:32,0:19:38.32:0,38,442	0/0:22,0:15:35.52:0,36,359	0/1:29,0:29:63.03:63,0,151	1/1:1,21:22:49.41:689,49,0	1/1:0,24:24:51.17:729,51,0	0/0:35,0:35:99:0,105,1386	0/1:29,0:29:76.65:77,0,108	0/0:26,0:26:75.24:0,75,1025	0/0:21,0:21:53.49:0,53,773	1/1:0,18:18:45.15:643,45,0	0/1:24,0:24:49.26:85,0,49	1/1:0,19:19:57.19:814,57,0	1/1:0,21:21:51.17:728,51,0	0/1:24,0:24:52.85:61,0,53	0/0:20,0:20:60.14:0,60,799	1/1:2,20:22:11.62:537,12,0	0/1:29,0:29:65.90:66,0,208	0/1:29,0:29:78.81:99,0,79	0/0:24,0:24:72.22:0,72,957	1/1:1,20:21:54.06:736,54,0	1/1:20,0:20:9.36:92,9,0	0/1:20,0:20:31.77:51,0,32	0/1:28,0:28:20.39:65,0,20	0/0:25,0:25:75.23:0,75,1001	0/1:29,0:29:40.34:94,0,40	0/0:7,0:7:18.06:0,18,251
chr10	88398097	.	TCA	T	4244.58	PASS	AB=0.822;AC=21;AF=0.375;AN=56;BaseQRankSum=2.602;DP=939;FS=0.354;HRun=0;HaplotypeScore=203.8584;InbreedingCoeff=0.6771;MQ=52.97;MQ0=15;MQRankSum=0.358;QD=9.54;ReadPosRankSum=1.041;VQSLOD=4.6180;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:65:99:0,127,2087	0/0:25,0:25:4.23:0,4,852	0/0:28,0:13:11.64:0,12,161	0/0:23,0:18:9.78:0,10,115	0/0:29,0:26:21:0,21,309	1/1:33,0:31:13.69:207,14,0	1/1:35,1:32:25.75:320,26,0	1/1:18,27:41:34.67:861,35,0	1/1:30,21:48:3.99:567,4,0	0/0:38,0:36:84.28:0,84,1311	0/0:24,0:22:60.19:0,60,932	1/1:45,0:43:24.99:349,25,0	0/0:30,0:27:15.06:0,15,609	0/1:39,0:37:7.80:159,0,8	1/1:45,0:40:38.74:351,39,0	0/0:33,1:32:63.41:0,63,850	0/0:33,0:33:74.26:0,74,1115	1/1:18,0:18:7.56:141,8,0	0/0:25,0:24:33.29:0,33,393	0/0:30,0:29:38.94:0,39,540	0/1:24,36:54:56.57:612,0,57	1/1:28,2:27:4.89:196,5,0	0/0:25,1:26:15.59:0,16,251	0/0:35,0:33:58.50:0,59,796	0/0:32,0:32:51.16:0,51,786	0/1:30,7:32:99:423,0,125	0/0:15,0:15:20.94:0,21,449	1/1:4,2:6:8.28:58,8,0
chr10	88398111	.	ACT	A	2127.12	PASS	AB=0.935;AC=21;AF=0.375;AN=56;BaseQRankSum=10.209;DP=911;FS=6.050;HRun=0;HaplotypeScore=227.8163;InbreedingCoeff=-0.1393;MQ=50.04;MQ0=23;MQRankSum=-2.765;QD=3.61;ReadPosRankSum=-8.066;VQSLOD=-0.0433;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:63:99:0,146,2595	0/0:27,0:27:22.85:0,23,913	0/0:14,0:5:11.94:0,12,146	0/1:14,0:9:47.92:48,0,51	0/0:24,0:22:0.03:0,0,249	0/1:25,6:29:37.01:129,0,37	0/1:30,4:30:13.50:121,0,14	0/1:52,0:46:22.44:378,0,22	1/1:50,0:47:19.05:187,19,0	0/0:41,0:35:96.10:0,96,1486	0/0:27,0:23:63.13:0,63,994	0/1:45,6:49:77.37:201,0,77	0/0:26,0:23:32.32:0,32,582	0/1:26,8:32:28.20:105,0,28	0/1:37,6:38:15.84:101,0,16	0/0:36,0:34:7.10:0,7,736	0/0:32,0:32:64.10:0,64,1382	0/1:17,3:21:3.91:250,0,4	0/1:23,0:19:41.66:42,0,375	0/1:27,0:26:22.61:23,0,378	1/1:66,0:59:44.37:389,44,0	0/1:27,2:26:22.23:90,0,22	0/1:23,0:23:27.59:28,0,266	0/1:35,0:33:3.45:3,0,676	0/0:30,0:30:50.84:0,51,830	0/1:34,0:27:99:154,0,102	0/1:15,0:15:10.96:11,0,397	1/1:6,0:6:8.22:38,8,0
chr10	88398113	.	TCACA	T	3888.61	PASS	AB=0.904;AC=20;AF=0.370;AN=54;BaseQRankSum=5.422;DP=919;FS=2.192;HRun=0;HaplotypeScore=248.9947;InbreedingCoeff=-0.5918;MQ=49.26;MQ0=23;MQRankSum=-2.619;QD=5.84;ReadPosRankSum=-8.911;VQSLOD=0.0583;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:65:99:0,149,3476	0/0:27,0:27:69.01:0,69,1256	0/0:14,0:5:5.51:0,6,70	./.	0/1:21,4:23:99:124,0,204	0/1:31,0:29:96.61:97,0,383	0/1:38,0:34:99:121,0,318	0/1:52,5:52:99:476,0,701	0/1:30,19:46:99:108,0,468	0/0:41,0:35:87.22:0,87,1841	0/0:29,0:25:57.10:0,57,1195	0/1:51,0:50:99:296,0,881	0/1:20,5:22:73.61:74,0,612	0/1:34,0:32:93.46:93,0,156	0/1:41,0:37:51.18:51,0,445	0/1:30,6:34:99:322,0,737	0/0:33,0:33:89.65:0,90,1918	0/1:20,0:20:99:265,0,223	0/1:17,6:19:99:203,0,505	0/1:21,7:27:99:124,0,349	0/1:62,4:59:99:485,0,745	0/1:28,0:26:99:118,0,127	0/1:17,5:22:96.71:97,0,314	0/1:30,4:33:99:266,0,726	0/0:32,0:32:51.15:0,51,1063	0/1:22,12:27:99:400,0,502	0/1:14,1:15:99:161,0,380	0/1:6,0:6:7.81:8,0,31
chr10	88398141	.	TCA	T	2438.76	PASS	AB=0.908;AC=23;AF=0.411;AN=56;BaseQRankSum=10.506;DP=922;FS=32.219;HRun=0;HaplotypeScore=237.2314;InbreedingCoeff=0.2152;MQ=48.93;MQ0=25;MQRankSum=-4.073;QD=4.95;ReadPosRankSum=0.772;VQSLOD=1.4107;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:61:99:0,145,2516	0/0:19,0:19:51.16:0,51,824	0/0:27,0:15:30.07:0,30,407	0/1:17,1:12:3.93:4,0,417	0/1:22,3:23:16.55:17,0,379	1/1:4,25:28:17.91:210,18,0	1/1:8,25:29:45.06:554,45,0	0/0:57,0:53:77.85:0,78,1365	0/1:40,8:44:99:114,0,453	0/0:43,0:37:87.28:0,87,1384	0/0:23,0:21:51.17:0,51,841	1/1:16,29:43:13.16:532,13,0	0/1:21,2:21:31.56:32,0,269	1/1:6,25:29:14.91:191,15,0	1/1:3,29:29:20.64:263,21,0	0/1:30,2:30:21.25:21,0,684	0/0:42,0:42:99:0,101,1630	0/1:8,16:24:16.29:340,0,16	0/1:27,2:24:71.54:72,0,382	0/0:24,2:26:21.46:0,21,577	0/0:71,1:66:38.73:0,39,1612	1/1:10,19:27:15.03:191,15,0	0/0:19,6:25:9.63:0,10,455	0/1:36,0:34:11.60:12,0,797	0/0:32,0:32:56.62:0,57,847	0/1:37,1:32:35.01:35,0,943	0/1:11,1:12:38.58:39,0,264	0/1:9,0:9:3.72:4,0,129
chr10	88398289	.	CATA	C	1884.37	PASS	AB=0.828;AC=8;AF=0.143;AN=56;BaseQRankSum=9.040;DP=1045;FS=10.990;HRun=0;HaplotypeScore=221.6371;InbreedingCoeff=-0.1667;MQ=52.31;MQ0=22;MQRankSum=-9.869;QD=6.41;ReadPosRankSum=-2.292;VQSLOD=0.9160;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,144,3100	0/0:23,0:23:69.24:0,69,1618	0/0:50,0:17:40.17:0,40,876	0/0:48,0:24:57.89:0,58,1070	0/1:36,10:42:99:340,0,1524	0/0:27,0:27:72.21:0,72,1566	0/0:46,0:44:99:0,123,2738	0/0:46,0:40:99:0,107,2302	0/0:34,0:34:90.24:0,90,1944	0/0:36,0:36:99:0,99,2307	0/0:19,0:19:57.20:0,57,1292	0/0:49,0:49:99:0,138,3005	0/1:22,9:30:99:330,0,1280	0/0:38,0:38:99:0,105,2285	0/0:34,0:34:93.16:0,93,1977	0/1:42,4:39:99:100,0,1623	0/0:32,0:32:93.28:0,93,2073	0/0:22,0:22:58.26:0,58,1394	0/1:25,12:31:99:375,0,1114	0/1:36,4:40:99:151,0,1818	0/0:67,0:58:99:0,119,2904	0/0:33,0:33:84.29:0,84,1954	0/1:32,6:35:99:165,0,1444	0/0:38,6:40:38.32:0,38,1615	0/1:26,17:42:99:473,0,1236	0/0:36,0:32:96.32:0,96,2144	0/1:11,2:10:85.68:86,0,283	0/0:11,0:10:27.09:0,27,638
chr10	88398316	.	TCA	T	5350.02	PASS	AB=0.699;AC=9;AF=0.161;AN=56;BaseQRankSum=6.794;DP=1083;FS=3.141;HRun=0;HaplotypeScore=256.3365;InbreedingCoeff=-0.1923;MQ=50.64;MQ0=34;MQRankSum=-5.196;QD=14.94;ReadPosRankSum=1.514;VQSLOD=4.3106;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,150,2356	0/0:23,0:23:53.72:0,54,813	0/0:65,0:16:18.52:0,19,233	0/0:69,0:23:33.34:0,33,385	0/1:25,19:40:99:699,0,403	0/0:25,0:25:53.93:0,54,848	0/0:42,0:40:73.53:0,74,1217	0/0:50,0:43:99:0,108,1431	0/0:37,0:35:92.85:0,93,1359	0/0:39,0:39:99:0,99,1561	0/0:17,0:17:42.13:0,42,673	0/0:50,0:50:93.84:0,94,1923	0/1:21,20:40:99:631,0,548	0/0:30,0:30:78.22:0,78,1247	0/0:31,0:30:78.23:0,78,1236	0/1:18,24:35:99:792,0,252	0/0:34,0:34:81.25:0,81,1271	0/0:19,0:19:40.54:0,41,666	0/1:31,10:34:99:305,0,476	0/1:20,20:40:99:886,0,289	0/0:62,0:49:80.85:0,81,1040	0/0:26,0:26:60.20:0,60,950	0/1:18,20:35:99:750,0,315	0/1:31,13:41:99:422,0,237	0/1:30,15:45:99:549,0,764	0/0:32,1:32:38.58:0,39,1156	0/1:9,12:19:99:316,0,160	0/0:7,0:6:18.06:0,18,285
chr10	88398342	.	AAC	A	5852.43	PASS	AB=0.833;AC=23;AF=0.411;AN=56;BaseQRankSum=5.588;DP=1027;FS=14.021;HRun=0;HaplotypeScore=267.4770;InbreedingCoeff=0.2871;MQ=44.08;MQ0=61;MQRankSum=-1.201;QD=11.21;ReadPosRankSum=1.821;VQSLOD=3.2922;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,1:50:80.91:0,81,1746	0/0:18,0:18:3.49:0,3,554	0/0:84,0:11:3.49:0,3,201	0/0:88,0:16:28.60:0,29,396	0/1:34,8:38:99:173,0,321	1/1:12,7:19:32.64:388,33,0	1/1:16,15:26:50.69:586,51,0	0/0:55,0:50:99:0,108,1536	0/0:31,0:29:63.20:0,63,868	0/0:34,0:32:64.22:0,64,1146	0/0:8,0:8:18.06:0,18,297	1/1:30,10:40:82.04:942,82,0	0/1:30,8:38:99:327,0,536	1/1:21,7:28:39.12:489,39,0	1/1:12,14:24:45.61:546,46,0	0/1:26,11:30:99:458,0,166	0/0:35,0:32:74.51:0,75,1161	1/1:17,4:21:29.45:374,29,0	0/1:35,3:27:99:106,0,351	0/1:28,4:32:99:248,0,233	0/0:68,0:57:65.62:0,66,959	1/1:1,14:14:30.01:334,30,0	0/1:25,10:33:99:283,0,331	0/1:36,9:42:99:152,0,531	0/1:38,8:45:99:250,0,580	0/0:26,0:23:44.36:0,44,632	0/1:21,8:24:99:197,0,180	0/0:5,0:4:9.03:0,9,142
chr10	88398367	.	A	AT	639.03	PASS	AB=0.883;AC=14;AF=0.250;AN=56;BaseQRankSum=10.495;DP=915;FS=8.825;HRun=0;HaplotypeScore=249.2092;InbreedingCoeff=-0.3305;MQ=37.14;MQ0=109;MQRankSum=-9.005;QD=1.46;ReadPosRankSum=-0.464;VQSLOD=1.2211;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:44:99:0,103,1367	0/0:13,0:12:26.88:0,27,326	0/0:92,0:10:25.33:0,25,337	0/0:87,0:15:39.09:0,39,511	0/1:23,5:26:17.56:18,0,288	0/0:22,1:20:10.75:0,11,356	0/0:32,0:27:20.56:0,21,500	0/1:41,1:31:39.19:39,0,709	0/1:31,0:27:99:124,0,150	0/0:32,0:27:77.29:0,77,1049	0/0:7,0:6:15.05:0,15,209	0/0:30,0:27:56.65:0,57,632	0/1:15,7:21:83.36:83,0,291	0/0:22,0:20:40.73:0,41,416	0/0:24,0:21:2.44:0,2,316	0/1:15,11:24:99:133,0,115	0/0:36,0:32:78.35:0,78,1031	0/0:15,0:15:26.11:0,26,313	0/1:19,3:13:72.15:72,0,276	0/1:20,3:21:31.39:31,0,221	0/1:79,1:59:18.84:19,0,464	0/0:12,0:11:18.05:0,18,223	0/1:17,8:22:4.65:5,0,226	0/1:36,6:40:10.65:11,0,416	0/1:28,6:33:66.68:67,0,403	0/1:26,0:19:75.42:75,0,305	0/1:24,6:26:99:107,0,207	0/1:6,0:4:5.37:5,0,57
chr10	88398378	.	C	CACA	2157.84	PASS	AB=0.925;AC=23;AF=0.411;AN=56;BaseQRankSum=9.148;DP=828;FS=0.000;HRun=0;HaplotypeScore=237.1151;InbreedingCoeff=0.2291;MQ=36.83;MQ0=95;MQRankSum=-1.642;QD=4.74;ReadPosRankSum=-4.368;VQSLOD=1.8729;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:45:72.60:0,73,1146	0/0:10,0:10:19.29:0,19,225	0/0:69,0:7:19.30:0,19,234	0/0:63,0:9:27.07:0,27,334	0/0:22,0:21:16.10:0,16,124	1/1:19,0:16:5.72:172,6,0	1/1:27,0:20:6.31:169,6,0	0/1:40,0:28:99:144,0,250	0/1:18,1:28:57.46:134,0,57	0/0:29,0:25:62.87:0,63,852	0/0:6,0:6:10.52:0,11,156	1/1:28,0:26:30.96:417,31,0	0/0:22,0:19:9.42:0,9,108	1/1:21,0:19:9.79:201,10,0	0/1:22,0:19:73.51:76,0,74	0/1:26,0:25:39.02:39,0,50	0/0:31,0:30:19.56:0,20,855	1/1:14,0:14:11.17:117,11,0	0/0:21,0:15:19.20:0,19,179	0/0:19,0:17:0.34:0,0,16	1/1:64,0:56:10.67:418,11,0	1/1:12,0:11:14.78:161,15,0	0/1:20,0:17:24.85:25,0,48	0/1:41,0:42:30.52:31,0,103	0/1:37,0:35:12.49:12,0,60	0/1:29,0:22:49.87:208,0,50	0/0:27,0:23:7.86:0,8,85	0/1:4,0:4:19.43:20,0,19
chr10	88398671	.	AT	A	6009.21	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.098;DP=641;FS=4.914;HRun=5;HaplotypeScore=67.2945;InbreedingCoeff=0.9633;MQ=83.85;MQ0=0;MQRankSum=-3.623;QD=29.31;ReadPosRankSum=1.857;VQSLOD=5.5849;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.20:0,60,820	0/0:18,0:18:45.13:0,45,596	0/0:24,0:24:50.56:0,51,721	0/0:30,0:30:47.36:0,47,874	1/1:2,22:24:51.10:564,51,0	0/0:28,0:28:78.25:0,78,1052	0/0:21,0:21:60.20:0,60,821	0/0:22,0:22:57.18:0,57,766	0/0:25,0:25:69.19:0,69,920	0/0:35,0:35:99:0,99,1327	0/0:12,0:12:33.08:0,33,419	0/0:27,0:27:78.23:0,78,1021	1/1:1,31:32:81.23:919,81,0	0/0:24,0:24:69.23:0,69,944	0/0:26,0:26:75.24:0,75,1011	1/1:2,14:16:1.09:401,1,0	0/0:28,0:28:81.24:0,81,1089	0/0:23,0:23:63.18:0,63,841	1/1:1,15:16:45.10:489,45,0	1/1:1,31:32:84.24:952,84,0	0/0:18,0:18:45.15:0,45,615	0/0:21,0:21:63.20:0,63,847	1/1:1,21:22:60.17:679,60,0	1/1:1,12:13:36.10:408,36,0	1/1:2,24:26:69.20:781,69,0	0/0:24,0:23:60.18:0,60,791	1/1:0,24:24:72.21:816,72,0	0/0:8,0:8:24.08:0,24,328
chr10	88399029	.	T	TCTGC	7796.81	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.276;DP=634;FS=43.232;HRun=0;HaplotypeScore=137.3564;InbreedingCoeff=0.9952;MQ=71.39;MQ0=0;MQRankSum=-14.568;QD=64.97;ReadPosRankSum=-4.740;VQSLOD=2.4570;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,175,3540	0/0:12,0:12:36.11:0,36,708	0/0:23,0:23:66.23:0,66,1353	0/0:14,0:14:39.11:0,39,731	1/1:1,22:23:57.04:1512,57,0	0/0:21,0:21:63.20:0,63,1282	0/0:33,0:33:96.31:0,96,1907	0/0:29,0:29:81.28:0,81,1677	0/0:42,0:42:99:0,126,2600	0/0:33,0:33:96.32:0,96,1968	0/0:19,0:19:54.16:0,54,1083	0/0:27,0:27:81.28:0,81,1667	1/1:4,8:12:24.08:616,24,0	0/0:26,0:26:78.27:0,78,1624	0/0:36,0:36:99:0,108,2227	1/1:0,12:12:36.12:982,36,0	0/0:26,0:26:78.27:0,78,1622	0/0:16,0:16:45.11:0,45,899	1/1:6,5:11:30.06:605,30,0	1/1:0,19:21:60.21:1617,60,0	0/0:49,0:49:99:0,144,3007	0/0:22,0:22:66.21:0,66,1344	1/1:1,13:14:30.09:764,30,0	1/1:1,7:9:18.02:393,18,0	1/1:1,8:9:27.09:702,27,0	0/0:23,0:23:66.22:0,66,1346	1/1:1,7:9:24.08:606,24,0	0/0:5,0:5:15.05:0,15,315
chr10	88399057	.	G	GC	2983.57	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.463;DP=621;FS=29.225;HRun=0;HaplotypeScore=112.9438;InbreedingCoeff=0.9724;MQ=73.25;MQ0=0;MQRankSum=-11.829;QD=22.10;ReadPosRankSum=1.179;VQSLOD=2.3776;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,1932	0/0:13,0:13:36.12:0,36,498	0/0:19,0:19:54.15:0,54,734	0/0:20,0:20:57.15:0,57,759	1/1:3,24:27:37.07:515,37,0	0/0:27,0:27:81.18:0,81,1057	0/0:34,0:34:99:0,102,1405	0/0:29,0:29:81.26:0,81,1109	0/0:37,0:37:99:0,105,1448	0/0:32,0:32:93.31:0,93,1287	0/0:10,0:10:24.08:0,24,332	0/0:24,0:24:72.23:0,72,977	1/1:1,10:11:16.13:231,16,0	0/0:27,0:27:81.27:0,81,1130	0/0:36,0:36:99:0,105,1445	1/1:2,8:10:19.08:243,19,0	0/0:25,0:25:72.14:0,72,942	0/0:15,0:15:45.15:0,45,628	1/1:4,7:11:11.98:237,12,0	1/1:1,20:21:45.04:621,45,0	0/0:38,0:38:99:0,114,1566	0/0:25,0:25:75.25:0,75,1046	1/1:1,17:18:38.49:463,38,0	1/1:1,8:9:6.02:70,6,0	1/1:1,12:13:24:287,24,0	0/0:21,0:21:63.21:0,63,878	1/1:0,15:15:42.13:527,42,0	0/0:5,0:5:15.05:0,15,209
chr10	88399160	.	T	TC	3886.91	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=16.228;DP=607;FS=3.374;HRun=1;HaplotypeScore=123.9514;InbreedingCoeff=0.9830;MQ=77.80;MQ0=0;MQRankSum=-15.326;QD=32.94;ReadPosRankSum=-0.513;VQSLOD=3.2011;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,178,2454	0/0:15,0:15:45.15:0,45,629	0/0:16,0:16:42.13:0,42,566	0/0:18,0:18:51.15:0,51,681	1/1:1,15:16:46.20:536,46,0	0/0:19,0:19:57.19:0,57,797	0/0:27,0:27:81.27:0,81,1133	0/0:38,0:38:99:0,114,1577	0/0:45,0:45:99:0,132,1846	0/0:21,0:21:63.20:0,63,867	0/0:13,0:13:39.13:0,39,544	0/0:21,0:21:63.21:0,63,881	1/1:2,11:13:36.09:421,36,0	0/0:25,0:25:75.23:0,75,1029	0/0:25,0:25:75.24:0,75,1030	1/1:0,21:21:57.18:698,57,0	0/0:24,0:24:72.24:0,72,1007	0/0:18,0:18:51.14:0,51,692	1/1:0,9:9:24.08:309,24,0	1/1:1,13:14:41.78:468,42,0	0/0:33,0:33:96.32:0,96,1341	0/0:31,0:31:90.30:0,90,1259	1/1:0,15:15:36.36:425,36,0	1/1:0,4:4:6.02:71,6,0	1/1:0,10:10:30.09:366,30,0	0/0:25,0:25:72.24:0,72,1007	1/1:0,16:16:48.15:593,48,0	0/0:16,0:16:48.16:0,48,671
chr10	88399162	.	T	TCCAAA	8486.18	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=16.041;DP=608;FS=4.729;HRun=0;HaplotypeScore=155.2300;InbreedingCoeff=0.9830;MQ=79.06;MQ0=0;MQRankSum=-15.610;QD=75.77;ReadPosRankSum=-0.584;VQSLOD=6.3448;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,175,3681	0/0:15,0:15:45.15:0,45,1003	0/0:18,0:18:39.10:0,39,824	0/0:18,0:18:48.12:0,48,982	1/1:2,14:16:42.14:1094,42,0	0/0:19,0:19:57.20:0,57,1271	0/0:28,0:28:84.26:0,84,1788	0/0:38,0:38:99:0,105,2233	0/0:44,0:44:99:0,129,2873	0/0:21,0:21:60.21:0,60,1338	0/0:13,0:13:36.12:0,36,802	0/0:23,0:23:69.21:0,69,1455	1/1:0,11:11:33.11:920,33,0	0/0:25,0:25:72.25:0,72,1587	0/0:26,0:26:78.25:0,78,1661	1/1:1,18:19:57.16:1524,57,0	0/0:25,0:25:72.25:0,72,1606	0/0:17,0:17:48.16:0,48,1046	1/1:0,9:9:24.08:684,24,0	1/1:0,12:13:39.13:1056,39,0	0/0:34,0:34:99:0,99,2085	0/0:31,0:31:90.31:0,90,2007	1/1:2,13:15:42.11:944,42,0	1/1:1,2:3:6.02:165,6,0	1/1:1,9:10:30.08:762,30,0	0/0:26,0:26:69.24:0,69,1523	1/1:0,16:16:48.16:1337,48,0	0/0:16,0:16:48.16:0,48,1070
chr10	88402032	.	CA	C	4021.17	PASS	AB=0.964;AC=42;AF=0.750;AN=56;BaseQRankSum=6.107;DP=662;FS=5.658;HRun=1;HaplotypeScore=117.0098;InbreedingCoeff=-0.2094;MQ=82.41;MQ0=0;MQRankSum=-4.207;QD=6.28;ReadPosRankSum=11.519;VQSLOD=-0.7402;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:38,2:40:5.02:239,0,5	1/1:9,0:9:19.24:73,19,0	0/0:22,0:22:0.65:0,1,244	0/1:23,2:25:99:143,0,101	0/1:23,0:23:19.10:150,0,19	1/1:20,0:20:32.34:114,32,0	1/1:26,1:27:9.18:169,9,0	0/1:41,0:41:12.25:115,0,12	0/1:26,0:26:14.86:135,0,15	0/1:27,0:27:13.11:94,0,13	0/1:10,2:12:26.32:84,0,26	0/1:27,1:28:11.70:154,0,12	1/1:26,0:26:52.16:245,52,0	1/1:23,1:24:51.86:219,52,0	0/1:33,0:33:51.53:141,0,52	1/1:27,0:27:6.60:134,7,0	1/1:18,0:18:16.54:109,17,0	1/1:28,1:29:63.78:248,64,0	0/1:19,2:21:13.70:116,0,14	1/1:16,2:18:22.34:207,22,0	1/1:40,0:40:82.87:290,83,0	1/1:24,1:25:27.41:165,27,0	1/1:14,2:16:33.51:158,34,0	0/1:19,0:19:11.95:76,0,12	1/1:15,2:17:32.41:168,32,0	1/1:23,0:23:14.14:107,14,0	0/1:19,1:20:25.80:127,0,26	1/1:6,0:6:12.05:44,12,0
chr10	88402646	.	G	GC	6342.16	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-16.821;DP=743;FS=0.326;HRun=5;HaplotypeScore=95.5214;InbreedingCoeff=0.9985;MQ=81.02;MQ0=0;MQRankSum=-1.638;QD=33.73;ReadPosRankSum=2.552;VQSLOD=4.8106;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,111,1170	0/0:14,0:14:36.06:0,36,376	0/0:15,0:15:38.93:0,39,385	0/0:22,0:22:47.72:0,48,541	0/0:32,0:32:81.16:0,81,834	1/1:2,24:26:63.17:828,63,0	1/1:0,26:26:78.25:1026,78,0	0/0:25,0:25:72.10:0,72,743	0/0:28,0:28:72.18:0,72,773	0/0:26,0:26:66.13:0,66,679	0/0:15,0:15:39.08:0,39,410	1/1:0,26:26:66.21:868,66,0	0/0:27,0:27:78.18:0,78,817	1/1:1,23:25:57.18:740,57,0	1/1:5,29:34:78.25:1026,78,0	0/0:28,0:28:69.15:0,69,722	0/0:36,0:36:99:0,102,1088	1/1:0,25:25:75.24:987,75,0	0/0:19,0:19:48.11:0,48,503	0/0:31,0:31:78.15:0,78,814	0/0:35,0:35:96.22:0,96,1022	1/1:1,25:26:66.21:867,66,0	0/0:30,0:30:84.21:0,84,888	0/0:29,0:29:69.15:0,69,720	0/0:25,0:25:66.16:0,66,697	0/0:40,0:40:99:0,108,1150	0/0:30,0:29:72.15:0,72,749	0/0:6,0:6:18.05:0,18,193
chr10	88403262	.	G	GAA	3929.44	PASS	AB=0.755;AC=26;AF=0.464;AN=56;BaseQRankSum=0.336;DP=615;FS=14.336;HRun=12;HaplotypeScore=88.8713;InbreedingCoeff=0.6763;MQ=53.90;MQ0=5;MQRankSum=-1.286;QD=12.20;ReadPosRankSum=-2.597;VQSLOD=0.2339;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:52:65.18:0,65,652	0/0:10,0:8:18:0,18,166	0/0:5,0:2:3.89:0,4,30	0/0:8,0:5:8.70:0,9,61	1/1:4,13:22:34.87:329,35,0	0/0:18,0:21:14.23:0,14,154	0/0:23,0:22:20.80:0,21,364	0/1:11,0:8:40.58:50,0,41	1/1:5,15:21:24.04:315,24,0	0/0:28,0:28:62.81:0,63,616	0/0:22,0:22:18.80:0,19,281	0/0:17,0:18:6.30:0,6,292	1/1:9,18:26:17.86:252,18,0	0/0:22,0:22:35.43:0,35,295	0/0:30,0:30:37.30:0,37,399	1/1:6,16:22:36.08:483,36,0	0/0:29,0:31:48.63:0,49,534	0/0:13,0:16:34.95:0,35,329	1/1:13,15:22:20.74:493,21,0	1/1:9,10:19:31.93:309,32,0	0/1:8,0:17:31.57:136,0,32	0/1:21,0:20:21.30:21,0,177	1/1:1,10:11:11.99:146,12,0	1/1:3,22:26:24.08:336,24,0	1/1:11,11:24:21.86:232,22,0	1/1:11,2:28:50.94:468,51,0	0/1:8,13:21:3.70:230,0,4	1/1:3,2:7:12.02:128,12,0
chr10	88403922	.	GA	G	5547.46	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=7.275;DP=512;FS=30.044;HRun=10;HaplotypeScore=54.7730;InbreedingCoeff=0.8892;MQ=62.06;MQ0=3;MQRankSum=2.058;QD=19.33;ReadPosRankSum=5.015;VQSLOD=3.5266;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,2:29:22.61:0,23,654	0/0:6,0:8:11.70:0,12,95	0/0:25,0:10:1.77:0,2,203	0/1:11,0:5:17.06:17,0,47	1/1:1,24:24:53.98:469,54,0	1/1:1,12:12:29.99:260,30,0	1/1:1,12:13:29.99:260,30,0	0/0:27,1:28:36.99:0,37,604	0/0:2,0:25:45.56:0,46,235	0/0:14,0:14:27.07:0,27,299	0/0:15,0:15:34.91:0,35,364	1/1:2,13:14:28.12:279,28,0	1/1:3,15:17:32.86:286,33,0	1/1:2,10:11:23.99:208,24,0	1/1:1,21:22:47.99:417,48,0	1/1:0,19:19:44.99:391,45,0	0/0:18,1:19:48.13:0,48,531	1/1:1,18:19:44.99:391,45,0	1/1:3,13:16:41.95:358,42,0	1/1:1,14:15:38.99:338,39,0	0/0:26,0:26:69.63:0,70,752	1/1:5,11:16:39.44:336,39,0	1/1:3,15:18:44.99:391,45,0	1/1:1,19:20:50.99:443,51,0	1/1:2,12:14:26.99:234,27,0	0/0:26,0:26:65.98:0,66,694	1/1:1,20:21:53.99:469,54,0	0/0:9,0:9:15.04:0,15,166
chr10	88405121	.	G	GA	7313.89	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-16.125;DP=696;FS=4.720;HRun=6;HaplotypeScore=75.0579;InbreedingCoeff=0.9946;MQ=71.36;MQ0=0;MQRankSum=0.249;QD=30.86;ReadPosRankSum=4.342;VQSLOD=5.3602;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,156,1554	0/0:14,0:14:33.07:0,33,337	0/0:28,0:25:12.80:0,13,422	0/0:20,0:15:32.08:0,32,301	1/1:1,27:28:75.24:943,75,0	0/0:26,0:26:72.15:0,72,726	0/0:26,0:26:63.10:0,63,630	0/0:30,0:30:87.18:0,87,877	1/1:3,19:22:51.16:642,51,0	0/0:32,0:32:93.21:0,93,948	0/0:31,0:31:78.17:0,78,795	0/0:21,0:21:57.05:0,57,561	1/1:3,16:19:17.67:536,18,0	0/0:16,0:16:42.09:0,42,427	0/0:27,0:27:75.15:0,75,754	1/1:6,19:25:51.16:642,51,0	0/0:34,0:34:90.17:0,90,903	0/0:23,0:23:63.05:0,63,620	1/1:2,16:17:48.11:555,48,0	1/1:3,25:28:78.21:959,78,0	0/0:21,0:21:57.07:0,57,564	0/0:20,0:20:48.11:0,48,489	1/1:5,13:18:38.91:485,39,0	1/1:4,17:21:48.15:604,48,0	1/1:1,29:29:84.26:1044,84,0	0/0:28,0:28:75.17:0,75,765	1/1:1,27:28:72.23:906,72,0	0/0:9,0:9:27.06:0,27,275
chr10	88405427	.	TAG	T	12438.31	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=12.631;DP=649;FS=3.200;HRun=0;HaplotypeScore=82.4905;InbreedingCoeff=0.9779;MQ=69.03;MQ0=4;MQRankSum=0.886;QD=31.65;ReadPosRankSum=2.785;VQSLOD=6.8059;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.23:0,66,1097	0/0:16,1:17:4.27:0,4,606	0/0:22,0:22:47.01:0,47,674	0/0:14,0:11:21.07:0,21,300	1/1:10,34:44:99:1325,105,0	1/1:2,21:23:60.19:757,60,0	1/1:1,9:10:27.09:341,27,0	0/0:24,0:24:45.15:0,45,748	1/1:1,12:13:33.11:417,33,0	0/0:41,0:41:99:0,114,1894	0/0:33,0:33:78.25:0,78,1267	1/1:1,19:20:57.18:719,57,0	1/1:2,23:25:57.18:720,57,0	1/1:0,23:22:66.21:833,66,0	1/1:3,18:21:54.17:682,54,0	1/1:4,22:25:54.17:682,54,0	0/0:33,0:33:87.30:0,87,1435	1/1:2,11:12:27.09:341,27,0	1/1:3,15:18:45.14:568,45,0	1/1:2,25:27:75.21:927,75,0	0/0:11,0:11:30.10:0,30,499	1/1:2,12:14:36.12:454,36,0	1/1:0,23:23:66.21:833,66,0	1/1:1,21:21:54.17:682,54,0	1/1:6,30:36:78.25:985,78,0	0/0:26,0:26:72.24:0,72,1168	1/1:2,33:34:93.29:1173,93,0	0/0:9,0:9:21.07:0,21,343
chr10	88406759	.	GTCTC	G	1250.70	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=-0.345;DP=693;FS=1.626;HRun=0;HaplotypeScore=175.7162;InbreedingCoeff=0.0265;MQ=72.00;MQ0=1;MQRankSum=0.577;QD=6.10;ReadPosRankSum=-4.772;VQSLOD=1.1778;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,2496	0/0:13,0:13:39.08:0,39,825	0/0:37,0:33:85.85:0,86,1698	0/0:40,0:35:76.56:0,77,1358	0/1:34,0:34:99:151,0,278	0/0:17,0:17:51.16:0,51,1311	0/0:27,0:27:81.19:0,81,1836	0/0:33,0:33:81.16:0,81,1479	1/1:0,14:14:33.11:625,33,0	0/0:22,0:22:66.19:0,66,1417	0/0:25,0:25:72.16:0,72,1562	0/0:19,0:19:54.17:0,54,1399	0/1:13,0:13:37.90:38,0,263	0/0:22,0:22:66.20:0,66,1635	0/0:28,0:28:84.24:0,84,2047	0/0:29,0:29:27.19:0,27,709	0/0:34,0:34:96.20:0,96,2148	0/0:24,0:24:64.75:0,65,1559	0/1:18,0:18:99:117,0,299	0/1:26,0:26:99:113,0,256	0/0:26,0:26:78.19:0,78,1806	0/0:12,0:12:36.04:0,36,852	0/1:23,0:23:97.88:98,0,298	0/1:18,0:18:18.48:18,0,196	0/1:29,0:29:99:161,0,299	0/0:30,0:30:87.27:0,87,2153	0/1:30,0:30:81.54:82,0,487	0/0:10,0:10:29.99:0,30,685
chr10	88406761	.	C	CTG	1943.96	PASS	AB=0.766;AC=10;AF=0.179;AN=56;BaseQRankSum=13.437;DP=702;FS=8.636;HRun=0;HaplotypeScore=152.6625;InbreedingCoeff=0.0395;MQ=72.70;MQ0=1;MQRankSum=-12.703;QD=8.76;ReadPosRankSum=3.102;VQSLOD=2.7893;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1583	0/0:13,0:13:39.10:0,39,553	0/0:38,0:34:95.49:0,95,1317	0/0:42,0:37:51.02:0,51,1041	0/1:23,11:34:72.37:250,0,72	0/0:17,0:17:51.17:0,51,778	0/0:28,0:28:81.21:0,81,1149	0/0:31,0:31:81.21:0,81,1139	0/0:14,0:14:29.38:0,29,121	0/0:22,0:22:66.22:0,66,1008	0/0:26,0:26:75.22:0,75,1099	0/0:21,0:21:57.18:0,57,851	1/1:5,8:13:19.36:309,19,0	0/0:22,0:22:66.22:0,66,1009	0/0:28,0:28:84.27:0,84,1259	0/1:11,18:29:11.34:553,0,11	0/0:35,0:35:99:0,102,1487	0/0:24,0:24:66.20:0,66,986	0/1:16,1:17:12.93:13,0,252	0/1:20,6:26:99:139,0,149	0/0:27,0:27:78.20:0,78,1104	0/0:12,0:12:36.12:0,36,551	0/1:17,7:24:99:163,0,115	0/1:14,5:19:35.86:112,0,36	0/1:18,11:29:99:234,0,104	0/0:31,0:31:87.29:0,87,1313	0/1:18,13:31:99:323,0,177	0/0:10,0:10:30.10:0,30,441
chr10	88406763	.	C	CTGTCTG	6246.34	PASS	AB=0.785;AC=11;AF=0.196;AN=56;BaseQRankSum=10.800;DP=701;FS=1.257;HRun=0;HaplotypeScore=188.1615;InbreedingCoeff=0.1805;MQ=71.78;MQ0=1;MQRankSum=-10.191;QD=28.52;ReadPosRankSum=1.255;VQSLOD=4.7736;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,2203	0/0:13,0:13:39.10:0,39,769	0/0:40,0:36:88.05:0,88,1584	0/0:41,0:36:69.77:0,70,1180	0/1:22,11:33:29.90:563,0,30	0/0:18,0:18:51.16:0,51,1175	0/0:28,0:28:81.20:0,81,1615	0/0:29,0:29:78.23:0,78,1421	0/0:15,0:15:13.53:0,14,361	0/0:22,0:22:66.22:0,66,1352	0/0:26,0:26:78.19:0,78,1556	0/0:20,0:20:60.18:0,60,1344	1/1:4,8:12:15.24:712,15,0	0/0:23,0:23:69.22:0,69,1528	0/0:29,0:29:87.25:0,87,1906	1/1:11,18:29:8.64:1557,9,0	0/0:34,0:34:99:0,102,2142	0/0:25,0:25:68.68:0,69,1383	0/1:16,0:17:99:111,0,135	0/1:19,0:25:69.11:572,0,69	0/0:28,0:28:84.16:0,84,1550	0/0:12,0:12:36.12:0,36,804	0/1:16,6:23:61.79:516,0,62	0/1:16,5:21:42.37:387,0,42	0/1:17,11:28:39.22:795,0,39	0/0:30,0:30:87.28:0,87,1946	0/1:18,0:31:99:1033,0,104	0/0:10,0:10:30.10:0,30,631
chr10	88407697	.	CTT	C	4229.58	PASS	AB=0.538;AC=19;AF=0.339;AN=56;BaseQRankSum=-1.456;DP=513;FS=0.000;HRun=11;HaplotypeScore=81.7017;InbreedingCoeff=0.8485;MQ=76.96;MQ0=1;MQRankSum=0.690;QD=22.38;ReadPosRankSum=2.282;VQSLOD=4.5479;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.20:0,60,917	0/0:3,0:4:11.53:0,12,147	0/0:16,0:13:16.11:0,16,292	0/0:19,0:18:43.67:0,44,495	1/1:5,15:20:42.08:447,42,0	0/0:4,0:25:15.19:0,15,162	0/0:3,1:20:4.01:0,4,95	0/0:22,0:25:57.18:0,57,825	0/0:4,0:13:21.04:0,21,211	0/0:21,0:21:48.16:0,48,720	0/0:15,0:15:29.59:0,30,414	0/1:2,1:14:3.97:4,0,58	1/1:1,18:20:42.04:502,42,0	0/0:0,1:29:15.76:0,16,121	0/0:2,1:19:3.70:0,4,82	1/1:1,15:16:42.10:447,42,0	0/0:14,0:14:42.14:0,42,647	0/0:4,0:20:29.94:0,30,103	1/1:3,18:23:59.59:592,60,0	1/1:3,19:22:51.10:543,51,0	0/0:19,0:19:51.17:0,51,765	0/0:1,1:16:0.56:0,1,68	1/1:1,17:19:38.71:395,39,0	1/1:2,11:13:18.02:192,18,0	1/1:0,13:13:33.08:351,33,0	0/0:17,0:19:53.66:0,54,776	1/1:3,25:29:65.83:757,66,0	0/0:7,0:7:21.07:0,21,323
chr10	88407921	.	ACACACG	A	4977.31	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=2.672;DP=523;FS=1.118;HRun=0;HaplotypeScore=136.8934;InbreedingCoeff=0.6079;MQ=49.22;MQ0=29;MQRankSum=-2.149;QD=11.60;ReadPosRankSum=-0.013;VQSLOD=4.0482;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:45.56:0,46,1451	0/0:10,0:10:29.97:0,30,689	0/1:41,0:6:5.98:6,0,46	0/1:45,0:9:18.88:19,0,20	1/1:17,1:18:38.42:363,38,0	1/1:21,0:20:21.41:220,21,0	1/1:15,0:15:32.82:259,33,0	1/1:24,0:22:49.56:368,50,0	1/1:15,0:13:17.98:153,18,0	0/0:20,0:18:3.99:0,4,623	0/0:16,0:16:10.18:0,10,806	1/1:21,0:21:23.87:234,24,0	1/1:12,1:12:23.55:213,24,0	1/1:13,0:13:18.01:204,18,0	1/1:12,0:12:15:156,15,0	1/1:25,0:25:53.70:481,54,0	0/0:21,0:20:44.73:0,45,776	1/1:13,0:12:27.34:272,27,0	1/1:13,0:12:35.37:352,35,0	1/1:14,0:14:2.99:24,3,0	1/1:10,0:7:11.80:98,12,0	1/1:11,0:11:12.44:97,12,0	1/1:13,0:12:3.35:17,3,0	1/1:27,2:27:15:370,15,0	1/1:14,1:14:14.23:168,14,0	1/1:12,1:13:11.76:297,12,0	1/1:26,1:26:47.79:573,48,0	0/1:8,0:8:13.13:36,0,13
chr10	88407923	.	ACACG	A	5566.42	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=2.137;DP=525;FS=1.789;HRun=0;HaplotypeScore=122.5366;InbreedingCoeff=0.5053;MQ=49.04;MQ0=30;MQRankSum=-1.709;QD=11.67;ReadPosRankSum=-0.268;VQSLOD=4.2667;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:2.25:2,0,996	0/0:10,0:10:29.93:0,30,523	0/1:41,0:6:7.11:7,0,46	0/1:44,0:9:19.69:20,0,20	1/1:17,1:18:38.61:482,39,0	1/1:21,0:20:21.41:192,21,0	1/1:15,0:15:32.82:260,33,0	1/1:25,0:23:60.45:451,60,0	1/1:14,0:12:17.90:139,18,0	0/1:19,0:17:18.17:18,0,489	0/0:16,0:16:12.10:0,12,595	1/1:20,0:20:23.74:217,24,0	1/1:12,1:12:26.85:283,27,0	1/1:14,0:13:18:176,18,0	1/1:12,0:12:15:142,15,0	1/1:24,1:25:51.23:480,51,0	0/0:22,0:21:47.58:0,48,611	1/1:13,0:12:27.16:239,27,0	1/1:14,1:14:40.93:428,41,0	1/1:1,13:14:3:26,3,0	1/1:10,0:7:11.98:98,12,0	1/1:11,0:11:12.44:97,12,0	1/1:2,11:12:2.56:17,3,0	1/1:27,1:26:37.03:489,37,0	1/1:14,2:15:23.97:253,24,0	1/1:13,0:13:11.87:335,12,0	1/1:26,0:25:47.82:622,48,0	1/1:7,1:8:8.96:95,9,0
chr10	88407925	.	ACG	A	4801.13	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=3.596;DP=535;FS=0.531;HRun=0;HaplotypeScore=115.6245;InbreedingCoeff=0.6813;MQ=49.00;MQ0=31;MQRankSum=-3.198;QD=10.96;ReadPosRankSum=-0.280;VQSLOD=4.1216;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:22.86:0,23,617	0/0:10,0:10:29.92:0,30,370	0/1:40,0:6:6.38:6,0,46	0/1:44,0:9:19.41:19,0,20	1/1:14,4:18:38.75:350,39,0	1/1:16,5:20:21.36:165,21,0	1/1:16,3:19:32.84:261,33,0	1/1:26,0:23:63.45:474,63,0	1/1:12,2:12:16.53:126,17,0	0/0:20,0:18:3.64:0,4,370	0/0:16,0:16:18.42:0,18,361	1/1:14,6:20:23.77:202,24,0	1/1:10,4:13:26.83:216,27,0	1/1:11,5:15:17.96:149,18,0	1/1:10,2:12:14.99:128,15,0	1/1:17,8:25:53.66:427,54,0	0/0:23,0:22:22.65:0,23,426	1/1:8,3:10:27.40:225,27,0	1/1:16,0:15:43.67:360,44,0	1/1:13,1:14:2.96:19,3,0	1/1:10,0:7:11.68:97,12,0	1/1:13,1:14:12.44:97,12,0	1/1:12,1:12:2.73:17,3,0	1/1:29,0:27:41.97:380,42,0	1/1:14,2:15:24.03:256,24,0	1/1:13,0:13:11.85:263,12,0	1/1:19,6:24:47.91:439,48,0	1/1:1,7:8:9.03:126,9,0
chr10	88407927	.	GCA	G	512.36	PASS	AB=0.948;AC=32;AF=0.615;AN=52;BaseQRankSum=8.094;DP=544;FS=3.708;HRun=0;HaplotypeScore=132.2744;InbreedingCoeff=0.2739;MQ=48.58;MQ0=31;MQRankSum=-1.799;QD=1.50;ReadPosRankSum=4.195;VQSLOD=2.1326;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:11.44:11,0,438	0/0:10,0:10:19.85:0,20,249	./.	./.	1/1:17,0:17:15.49:71,15,0	1/1:21,0:20:4.30:18,4,0	0/0:21,0:21:0.47:0,0,1	0/0:31,0:28:17.67:0,18,98	0/0:14,0:12:0.89:0,1,2	0/0:21,0:19:3.99:0,4,243	0/1:12,4:16:26.90:27,0,155	1/1:20,0:20:3.91:17,4,0	1/1:14,0:13:6.74:29,7,0	1/1:19,0:18:4.77:19,5,0	1/1:12,0:12:2.69:13,3,0	1/1:25,0:25:8.38:39,8,0	0/1:21,3:23:4.63:5,0,282	0/1:13,0:12:7.52:18,0,8	1/1:16,0:15:2.75:47,3,0	1/1:14,0:14:0.47:1,0,0	0/0:10,0:7:0:0,0,0	0/0:14,0:14:0:0,0,0	0/1:14,0:13:0.17:0,0,0	1/1:29,0:27:15.60:70,16,0	1/1:15,0:14:11.55:66,12,0	0/1:14,0:14:10.19:24,0,10	1/1:24,0:23:24.85:116,25,0	1/1:8,0:8:8.85:59,9,0
chr10	88407950	.	CACACACACACACATATATAT	C	2805.76	PASS	AB=0.987;AC=20;AF=0.357;AN=56;BaseQRankSum=5.258;DP=504;FS=2.856;HRun=0;HaplotypeScore=236.5075;InbreedingCoeff=0.4075;MQ=46.09;MQ0=23;MQRankSum=-2.413;QD=12.75;ReadPosRankSum=-1.345;VQSLOD=1.8403;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:75.23:0,75,5050	0/0:12,0:12:36.11:0,36,2243	0/0:17,0:3:8.98:0,9,137	0/0:21,0:7:17.40:0,17,222	0/0:16,0:16:24.55:0,25,793	1/1:13,1:14:15.05:490,15,0	1/1:22,0:22:17.09:335,17,0	0/0:37,0:33:96.15:0,96,2968	1/1:10,0:10:1.79:183,2,0	0/0:25,0:23:66.20:0,66,3372	0/0:18,0:18:42.62:0,43,2653	1/1:18,1:19:20.74:543,21,0	0/1:16,0:15:1.44:1,0,671	1/1:24,1:24:13.70:471,14,0	1/1:11,0:11:8.95:258,9,0	0/1:22,0:22:9.66:10,0,807	0/0:22,0:21:45.63:0,46,2932	0/1:11,1:12:19.80:491,0,20	0/1:15,0:15:83.49:83,0,464	0/0:8,0:8:3.01:0,3,85	0/0:12,0:8:5.40:0,5,245	1/1:12,0:12:2.96:75,3,0	0/1:13,0:12:12.03:12,0,102	0/0:28,0:28:17.78:0,18,808	0/0:13,0:13:0.20:0,0,459	0/0:14,0:14:42.14:0,42,1825	0/1:28,0:27:34.10:34,0,771	0/0:12,0:12:21.07:0,21,1023
chr10	88407952	.	CACACACACACATATATAT	C	2525.20	PASS	AB=0.982;AC=22;AF=0.393;AN=56;BaseQRankSum=6.325;DP=474;FS=1.982;HRun=0;HaplotypeScore=211.9803;InbreedingCoeff=0.3680;MQ=46.76;MQ0=21;MQRankSum=-2.626;QD=11.58;ReadPosRankSum=-0.877;VQSLOD=2.6325;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:80.06:0,80,4704	0/0:11,0:11:33.11:0,33,1978	0/0:13,0:3:5.85:0,6,99	0/0:17,0:6:11.82:0,12,126	0/0:16,0:16:24.54:0,25,587	1/1:9,4:13:15:399,15,0	1/1:18,3:21:17.13:321,17,0	0/0:38,0:34:95.58:0,96,2605	1/1:5,0:5:14.79:190,15,0	0/0:25,0:23:66.18:0,66,3057	0/0:18,0:18:42.14:0,42,2394	1/1:11,5:16:19.18:454,19,0	0/1:16,0:15:2.63:3,0,469	1/1:17,4:20:13.59:398,14,0	1/1:7,2:9:6.02:194,6,0	0/1:21,0:21:11.22:11,0,519	0/0:22,0:21:45.63:0,46,2694	0/1:10,2:12:21.73:424,0,22	0/1:15,0:15:99:146,0,319	0/1:9,0:9:46.57:47,0,53	0/0:10,0:7:5.40:0,5,244	1/1:6,1:7:3.01:54,3,0	0/1:12,0:11:12.03:12,0,76	0/0:28,0:28:11.81:0,12,561	0/1:13,0:13:0.77:1,0,354	0/0:16,0:16:48.15:0,48,1809	0/1:27,0:26:57.79:58,0,468	0/0:12,0:12:21.07:0,21,952
chr10	88407960	.	CACATATAT	C	3828.63	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=9.433;DP=434;FS=0.000;HRun=0;HaplotypeScore=136.0290;InbreedingCoeff=0.8296;MQ=51.78;MQ0=13;MQRankSum=-3.878;QD=15.25;ReadPosRankSum=-0.072;VQSLOD=2.3567;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:60.10:0,60,2388	0/0:10,0:10:30.08:0,30,977	0/0:4,0:1:3.01:0,3,69	0/0:6,0:4:11.99:0,12,179	1/1:11,4:15:18.78:150,19,0	1/1:14,0:14:12.04:186,12,0	1/1:19,0:19:16.07:237,16,0	0/0:34,0:30:72.74:0,73,1605	1/1:7,0:6:18.06:333,18,0	0/0:23,0:22:46.20:0,46,1686	0/0:18,0:18:35.90:0,36,1019	1/1:13,0:13:11.43:164,11,0	1/1:13,3:16:19.40:293,19,0	1/1:19,0:18:11.67:198,12,0	1/1:11,0:11:6.02:97,6,0	1/1:11,6:17:29.43:519,29,0	0/0:21,0:20:45.59:0,46,1411	0/1:12,0:12:4.05:146,0,4	1/1:15,0:15:19.16:423,19,0	1/1:7,1:8:9.03:185,9,0	0/0:12,0:10:15.05:0,15,374	1/1:7,0:7:3.01:38,3,0	1/1:11,1:11:5.80:113,6,0	1/1:26,0:26:18.25:133,18,0	1/1:13,0:13:14.56:131,15,0	0/0:14,0:14:24.41:0,24,872	1/1:23,4:26:30.94:483,31,0	0/0:12,0:12:21.05:0,21,464
chr10	88407962	.	CATATATAT	C	2811.21	PASS	AB=0.739;AC=30;AF=0.536;AN=56;BaseQRankSum=9.322;DP=437;FS=5.198;HRun=0;HaplotypeScore=137.8515;InbreedingCoeff=0.6136;MQ=53.10;MQ0=13;MQRankSum=-6.280;QD=11.24;ReadPosRankSum=4.749;VQSLOD=1.7952;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.20:0,78,2566	0/0:12,0:12:33.11:0,33,1195	0/0:5,0:2:6.02:0,6,178	0/0:6,0:4:12.04:0,12,202	0/1:11,0:15:15.77:38,0,16	1/1:6,8:14:12.04:255,12,0	1/1:5,16:21:17.96:337,18,0	0/0:34,0:30:72.13:0,72,2129	1/1:7,0:6:18:203,18,0	0/0:24,0:23:59.42:0,59,2054	0/0:18,0:18:36.12:0,36,1196	1/1:6,7:13:11.43:235,11,0	1/1:7,0:15:6.30:176,6,0	1/1:7,12:18:11.67:265,12,0	1/1:5,6:11:6.02:130,6,0	1/1:12,0:18:26.59:343,27,0	0/0:21,0:20:42.62:0,43,1561	1/1:5,7:12:8.98:211,9,0	0/1:7,0:15:47.23:196,0,47	1/1:8,0:8:9.03:133,9,0	0/0:12,0:10:15.05:0,15,495	1/1:2,5:7:3.01:56,3,0	1/1:12,0:11:5.80:73,6,0	0/1:11,0:24:24.41:28,0,24	0/1:11,0:13:1.48:35,0,1	0/0:14,0:14:41.92:0,42,1207	1/1:14,0:25:6.86:303,7,0	0/0:12,0:12:21.07:0,21,627
chr10	88408344	.	A	ACC	9805.47	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-12.054;DP=537;FS=3.632;HRun=7;HaplotypeScore=66.2793;InbreedingCoeff=0.9782;MQ=94.80;MQ0=2;MQRankSum=-2.918;QD=34.28;ReadPosRankSum=3.816;VQSLOD=4.8463;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,105,1189	0/0:13,0:13:39.10:0,39,445	0/0:33,0:33:66.30:0,66,739	0/0:19,0:19:33.05:0,33,366	1/1:5,18:23:51.13:795,51,0	1/1:2,18:20:45.15:738,45,0	1/1:1,26:27:54.18:886,54,0	0/0:26,0:26:63.14:0,63,710	1/1:3,0:5:6.90:60,7,0	0/0:26,0:26:63.16:0,63,725	0/0:15,0:15:45.13:0,45,524	1/1:0,17:18:47.65:747,48,0	1/1:2,16:18:45.15:738,45,0	1/1:3,15:18:36.12:586,36,0	1/1:2,11:14:35.61:550,36,0	1/1:2,13:14:27.09:433,27,0	0/0:32,0:32:93.25:0,93,1070	1/1:3,19:23:17.99:754,18,0	1/1:4,7:12:23.53:317,24,0	1/1:0,7:6:15.01:217,15,0	0/0:19,0:19:57.15:0,57,653	1/1:2,9:12:12.04:197,12,0	1/1:1,9:11:29.99:459,30,0	1/1:1,22:24:63.22:1029,63,0	1/1:4,9:13:27.09:441,27,0	0/0:20,0:20:57.14:0,57,646	1/1:3,22:25:53.96:857,54,0	0/0:8,0:8:21.06:0,21,243
chr10	88408807	.	TG	T	8826.74	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=8.844;DP=552;FS=2.072;HRun=8;HaplotypeScore=76.0946;InbreedingCoeff=0.9592;MQ=85.40;MQ0=0;MQRankSum=-3.950;QD=23.41;ReadPosRankSum=3.455;VQSLOD=5.6674;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,1462	0/0:4,0:4:6.02:0,6,72	0/0:34,0:34:83.54:0,84,926	0/0:18,1:18:6.61:0,7,341	1/1:1,20:21:54.04:513,54,0	1/1:1,12:13:30.05:290,30,0	1/1:1,22:23:57.09:549,57,0	1/1:4,21:25:63.09:608,63,0	1/1:15,0:15:30.43:121,30,0	0/0:23,0:23:60.18:0,60,724	0/0:19,0:19:57.10:0,57,658	1/1:0,10:10:21.03:203,21,0	1/1:0,14:14:39.06:377,39,0	1/1:0,18:18:42.06:404,42,0	1/1:1,19:20:51.08:493,51,0	1/1:2,23:26:62.13:585,62,0	0/0:32,0:32:87.21:0,87,1004	1/1:2,15:17:42.06:406,42,0	1/1:2,14:16:42.05:399,42,0	1/1:1,19:20:54.08:521,54,0	1/1:2,21:23:54.08:522,54,0	1/1:1,14:15:42.07:405,42,0	1/1:2,15:17:39.06:376,39,0	1/1:3,22:25:63.10:608,63,0	1/1:1,12:13:30.05:290,30,0	1/1:1,14:15:42.06:405,42,0	1/1:3,23:26:63.10:608,63,0	1/1:0,5:5:15.02:145,15,0
chr10	88408814	.	GGA	G	525.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.076;DP=565;FS=0.769;HRun=0;HaplotypeScore=117.7186;InbreedingCoeff=0.9227;MQ=82.01;MQ0=0;MQRankSum=-2.099;QD=35.01;ReadPosRankSum=-1.845;VQSLOD=5.0291;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,2480	0/0:3,0:3:9.02:0,9,142	0/0:30,0:30:87.20:0,87,1482	0/0:17,0:16:42.56:0,43,638	0/0:22,0:22:39.45:0,39,286	0/0:12,0:12:28.41:0,28,141	0/0:27,0:27:54.60:0,55,351	0/0:27,0:27:72.36:0,72,460	1/1:0,15:15:42.14:620,42,0	0/0:21,0:21:63.22:0,63,1191	0/0:19,0:19:57.19:0,57,1048	0/0:12,0:12:22.84:0,23,126	0/0:17,0:17:45.92:0,46,257	0/0:22,0:22:50.37:0,50,295	0/0:21,0:21:54.29:0,54,293	0/0:25,0:25:26.64:0,27,267	0/0:32,0:32:96.25:0,96,1628	0/0:16,0:16:42.78:0,43,239	0/0:14,0:14:17.16:0,17,161	0/0:19,0:19:39.58:0,40,221	0/0:24,0:24:60.15:0,60,364	0/0:17,0:17:36.98:0,37,267	0/0:17,0:17:42.45:0,42,228	0/0:27,0:27:74.55:0,75,421	0/0:12,0:12:27.47:0,27,134	0/0:16,0:16:33.43:0,33,203	0/0:26,0:26:67.50:0,68,360	0/0:6,0:6:17.20:0,17,94
chr10	88408926	.	GCTTGTACTTTAAGTCTCT	G	1218.81	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.109;DP=701;FS=1.248;HRun=0;HaplotypeScore=329.1579;InbreedingCoeff=0.9948;MQ=89.11;MQ0=0;MQRankSum=-4.374;QD=87.06;ReadPosRankSum=0.854;VQSLOD=2.8850;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,10498	0/0:7,0:7:21.07:0,21,1598	0/0:28,0:27:71.37:0,71,4246	0/0:27,0:27:69.07:0,69,3826	0/0:31,0:31:87.30:0,87,7004	0/0:17,0:17:51.18:0,51,3858	0/0:23,0:23:69.22:0,69,5254	0/0:35,0:35:93.29:0,93,6538	1/1:1,13:14:27.09:1313,27,0	0/0:18,0:18:54.19:0,54,3866	0/0:28,0:28:81.25:0,81,5343	0/0:24,0:24:66.21:0,66,4768	0/0:25,0:25:72.25:0,72,5777	0/0:33,0:33:93.32:0,93,7626	0/0:27,0:27:81.27:0,81,6114	0/0:30,0:30:87.30:0,87,6477	0/0:25,0:25:75.24:0,75,4945	0/0:14,0:14:42.14:0,42,2866	0/0:19,0:19:48.16:0,48,3226	0/0:21,0:21:63.22:0,63,5126	0/0:35,0:35:90.31:0,90,7389	0/0:25,0:25:72.25:0,72,5671	0/0:25,0:25:72.23:0,72,5465	0/0:32,0:32:96.31:0,96,7784	0/0:27,0:27:78.27:0,78,6404	0/0:20,0:20:57.20:0,57,4658	0/0:32,0:32:93.28:0,93,7423	0/0:13,0:13:36.12:0,36,2925
chr10	88409633	.	T	TGA	5521.05	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.373;DP=636;FS=14.816;HRun=0;HaplotypeScore=127.5446;InbreedingCoeff=0.9998;MQ=84.97;MQ0=0;MQRankSum=-9.059;QD=37.30;ReadPosRankSum=0.590;VQSLOD=5.4812;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.25:0,78,993	0/0:11,0:11:30.09:0,30,369	0/0:26,0:25:46.37:0,46,587	0/0:22,0:23:42.11:0,42,512	0/0:32,0:32:84.25:0,84,1044	1/1:6,19:25:54.18:902,54,0	1/1:6,16:24:51.17:840,51,0	0/0:34,0:34:87.27:0,87,1097	0/0:23,0:23:51.15:0,51,637	0/0:21,0:21:51.14:0,51,627	0/0:20,0:20:60.19:0,60,764	1/1:2,11:13:33.11:551,33,0	0/0:22,0:22:63.20:0,63,800	1/1:1,15:16:42.14:701,42,0	1/1:2,23:26:66.23:1102,66,0	0/0:28,0:28:66.20:0,66,827	0/0:14,0:14:36.12:0,36,457	1/1:7,12:19:39.11:624,39,0	0/0:15,0:15:42.11:0,42,508	0/0:32,0:32:84.27:0,84,1069	0/0:15,0:15:42.13:0,42,535	1/1:4,20:25:48.16:801,48,0	0/0:24,0:24:66.21:0,66,838	0/0:16,0:16:48.14:0,48,597	0/0:27,0:27:66.21:0,66,840	0/0:31,0:31:81.25:0,81,1019	0/0:31,0:31:84.26:0,84,1054	0/0:14,0:14:39.12:0,39,497
chr10	88409729	.	T	TAA	4800.79	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.921;DP=653;FS=13.115;HRun=7;HaplotypeScore=97.3142;InbreedingCoeff=0.9998;MQ=78.39;MQ0=0;MQRankSum=-9.641;QD=40.01;ReadPosRankSum=-0.126;VQSLOD=3.4284;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.15:0,69,789	0/0:14,0:14:39.12:0,39,455	0/0:23,0:23:57.13:0,57,645	0/0:15,0:15:33.06:0,33,370	0/0:26,0:26:72.20:0,72,839	1/1:2,21:23:63.21:1015,63,0	1/1:2,19:20:51.17:836,51,0	0/0:39,0:39:99:0,102,1179	0/0:24,0:24:72.21:0,72,838	0/0:34,0:34:93.27:0,93,1080	0/0:17,0:17:51.15:0,51,594	1/1:1,10:12:32.60:491,33,0	0/0:30,0:30:84.25:0,84,979	1/1:0,11:11:33.11:532,33,0	1/1:12,11:23:48.16:785,48,0	0/0:29,0:29:81.23:0,81,934	0/0:28,0:28:66.02:0,66,768	1/1:3,10:13:36.06:561,36,0	0/0:23,0:23:69.14:0,69,769	0/0:31,0:31:93.26:0,93,1073	0/0:15,0:15:45.13:0,45,524	1/1:5,12:17:39.05:581,39,0	0/0:22,0:22:60.15:0,60,678	0/0:20,0:20:51.14:0,51,594	0/0:24,0:23:66.19:0,66,769	0/0:33,0:33:96.28:0,96,1119	0/0:32,0:32:87.24:0,87,1003	0/0:27,0:27:78.23:0,78,909
chr10	88409792	.	CTT	C	2133.19	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.387;DP=651;FS=99.381;HRun=4;HaplotypeScore=120.5284;InbreedingCoeff=0.9763;MQ=89.12;MQ0=3;MQRankSum=-10.164;QD=34.41;ReadPosRankSum=0.454;VQSLOD=-0.6587;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1787	0/0:10,0:10:30.09:0,30,504	0/0:37,0:33:86.93:0,87,1492	0/0:36,0:34:93.21:0,93,1630	0/0:28,0:27:84.20:0,84,1475	1/1:3,12:15:39.12:554,39,0	1/1:1,13:13:39.13:573,39,0	0/0:18,0:18:54.18:0,54,985	0/0:15,0:15:39.13:0,39,714	0/0:35,0:35:99:0,102,1827	0/0:28,0:28:84.29:0,84,1564	1/1:2,3:5:9.03:132,9,0	0/0:28,0:28:69.19:0,69,1234	1/1:0,5:5:12.04:176,12,0	1/1:0,6:6:18.06:265,18,0	0/0:31,0:30:66.08:0,66,1085	0/0:31,0:31:93.26:0,93,1666	1/1:1,3:4:12.02:161,12,0	0/0:21,0:21:60.21:0,60,1123	0/0:32,0:32:96.31:0,96,1734	0/0:38,0:38:99:0,111,2011	1/1:2,11:13:33.09:465,33,0	0/0:24,0:24:63.19:0,63,1118	0/0:27,0:27:74.47:0,74,1355	0/0:23,0:23:51.17:0,51,955	0/0:31,0:31:93.31:0,93,1713	0/0:35,0:35:96.32:0,96,1750	0/0:26,0:26:72.02:0,72,1009
chr10	88409811	.	A	AGTT	45.75	PASS	AB=0.859;AC=9;AF=0.161;AN=56;BaseQRankSum=3.972;DP=667;FS=19.058;HRun=0;HaplotypeScore=165.7185;InbreedingCoeff=0.2406;MQ=73.72;MQ0=9;MQRankSum=-4.858;QD=0.65;ReadPosRankSum=-4.879;VQSLOD=-0.3544;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:81.15:0,81,1357	0/0:9,0:9:18.06:0,18,312	0/0:52,0:27:78.26:0,78,1312	0/0:46,0:28:80.82:0,81,1221	0/0:28,0:27:60.16:0,60,990	0/1:10,4:14:11.48:11,0,42	0/1:11,0:11:15.16:15,0,26	0/0:27,0:27:78.22:0,78,1268	0/1:11,3:14:17.87:30,0,18	0/0:33,0:33:96.32:0,96,1644	0/0:25,0:25:75.24:0,75,1289	1/1:3,0:3:5.94:41,6,0	0/0:20,0:20:38.97:0,39,613	0/0:5,1:6:9.16:0,9,29	0/1:7,0:7:18.97:23,0,19	0/0:27,0:26:54.17:0,54,916	0/0:37,0:37:92.99:0,93,1622	1/1:1,2:3:1.27:53,1,0	0/0:19,0:18:41.98:0,42,742	0/0:30,0:30:74.98:0,75,1274	0/0:51,0:51:99:0,135,2310	0/1:10,8:18:1.72:2,0,60	0/0:22,0:22:41.85:0,42,705	0/0:32,0:32:59.59:0,60,986	0/0:26,0:26:57.12:0,57,980	0/0:27,0:27:78.23:0,78,1272	0/0:33,0:33:90.07:0,90,1556	0/0:13,0:13:39.13:0,39,666
chr10	88409827	.	ATGTG	A	4527.88	PASS	AB=0.933;AC=26;AF=0.464;AN=56;BaseQRankSum=7.344;DP=769;FS=6.411;HRun=0;HaplotypeScore=202.1138;InbreedingCoeff=0.7120;MQ=53.05;MQ0=23;MQRankSum=0.788;QD=12.58;ReadPosRankSum=5.427;VQSLOD=3.2020;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:57.64:0,58,1446	0/0:7,0:7:21.05:0,21,423	0/0:48,0:15:6:0,6,53	0/0:44,0:14:8.36:0,8,60	1/1:6,18:24:28.89:489,29,0	0/0:18,0:21:2.84:0,3,7	0/0:11,0:11:0.58:0,1,13	0/0:34,0:31:71.37:0,71,1059	1/1:24,0:24:2.67:37,3,0	0/0:27,0:28:64.22:0,64,1157	0/0:27,0:27:53.37:0,53,773	1/1:11,0:13:1.14:22,1,0	1/1:7,12:19:14.31:248,14,0	0/1:19,0:21:0.31:0,0,0	0/1:16,0:16:0.21:0,0,0	1/1:4,29:32:42.14:699,42,0	0/0:35,0:41:73.91:0,74,1425	0/1:7,0:7:30.33:30,0,66	1/1:20,2:16:20.24:256,20,0	1/1:9,23:32:44.64:716,45,0	0/0:67,0:68:99:0,135,2547	0/1:25,0:32:0.01:0,0,0	1/1:12,11:23:11.98:200,12,0	1/1:10,22:33:23.25:503,23,0	1/1:4,20:25:33.11:541,33,0	0/0:26,0:28:53.01:0,53,988	1/1:11,23:35:43.78:787,44,0	0/0:11,0:12:23.82:0,24,509
chr10	88409838	.	TGTGTG	T	129.16	PASS	AB=0.988;AC=13;AF=0.232;AN=56;BaseQRankSum=12.546;DP=822;FS=0.000;HRun=0;HaplotypeScore=259.6569;InbreedingCoeff=0.0687;MQ=49.61;MQ0=31;MQRankSum=1.160;QD=0.41;ReadPosRankSum=8.547;VQSLOD=1.6370;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:73.33:0,73,2306	0/0:7,0:7:21.07:0,21,632	0/0:58,0:12:33:0,33,461	0/0:49,0:7:20.71:0,21,303	0/1:25,0:25:1.24:1,0,194	0/0:27,0:27:0.29:0,0,5	0/0:14,0:13:2.91:0,3,57	0/0:43,0:38:99:0,108,2397	0/1:26,0:26:2.43:11,0,2	0/0:28,0:27:81.27:0,81,2069	0/0:24,0:24:69.23:0,69,1619	0/1:19,0:19:76.64:78,0,77	0/0:19,0:19:15.61:0,16,212	0/1:26,0:26:0.65:2,0,1	1/1:16,2:18:0.89:4,1,0	0/1:32,0:31:8.75:9,0,68	0/0:41,0:40:92.81:0,93,2379	0/1:7,1:8:99:120,0,110	0/1:21,0:15:4.30:4,0,274	0/1:29,0:29:10.17:10,0,179	0/0:65,0:65:99:0,166,4412	0/1:49,1:50:0.32:5,0,0	0/0:24,0:24:19.25:0,19,285	0/0:34,0:34:13.10:0,13,294	0/1:27,0:27:1.06:1,0,152	0/0:29,0:29:84.27:0,84,1950	0/1:32,0:32:2.87:3,0,208	0/0:10,0:9:24.05:0,24,731
chr10	88409843	.	G	GTAT	159.12	PASS	AB=0.899;AC=9;AF=0.161;AN=56;BaseQRankSum=6.647;DP=838;FS=14.447;HRun=0;HaplotypeScore=263.0567;InbreedingCoeff=0.4748;MQ=49.74;MQ0=29;MQRankSum=-6.352;QD=0.96;ReadPosRankSum=-4.228;VQSLOD=0.4710;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:76.08:0,76,1305	0/0:8,0:8:21.07:0,21,370	0/0:52,0:9:20.99:0,21,301	0/0:60,0:9:17.86:0,18,245	0/0:25,0:25:47.58:0,48,522	1/1:28,1:29:6.32:36,6,0	0/0:10,3:12:4.70:0,5,50	0/0:46,0:41:99:0,105,1850	0/0:27,0:27:5.25:0,5,34	0/0:28,0:27:78.25:0,78,1323	0/0:23,0:23:66.18:0,66,1054	0/1:17,2:21:42.65:102,0,43	0/0:15,0:15:21.90:0,22,237	0/1:30,1:31:0.17:3,0,0	1/1:21,1:23:3.26:13,3,0	0/0:32,0:31:48.01:0,48,472	0/0:44,0:43:85.08:0,85,1606	0/1:7,1:8:99:120,0,130	0/0:21,0:15:39.02:0,39,451	0/0:30,0:30:62.97:0,63,647	0/0:68,0:68:99:0,166,2808	1/1:52,2:54:1.30:9,1,0	0/0:21,0:21:25.44:0,25,362	0/0:31,0:31:47.84:0,48,532	0/0:26,0:26:44.97:0,45,497	0/0:29,0:29:87.15:0,87,1289	0/0:29,0:29:59.22:0,59,536	0/0:11,0:10:27.04:0,27,419
chr10	88409860	.	TGA	T	252.82	PASS	AB=0.918;AC=12;AF=0.214;AN=56;BaseQRankSum=7.492;DP=881;FS=3.488;HRun=0;HaplotypeScore=255.8453;InbreedingCoeff=0.3553;MQ=48.72;MQ0=31;MQRankSum=-8.227;QD=0.65;ReadPosRankSum=-1.740;VQSLOD=1.9094;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:76.12:0,76,1574	0/0:7,0:7:21.06:0,21,387	0/1:87,0:17:60.95:61,0,332	0/1:86,0:20:99:124,0,342	0/0:22,0:22:45.56:0,46,677	1/1:26,5:34:8.03:30,8,0	0/1:13,0:12:7.33:7,0,19	0/0:40,0:37:99:0,108,1939	1/1:12,12:26:5.72:58,6,0	0/0:26,0:26:77.87:0,78,1284	0/0:15,0:15:45.13:0,45,796	0/1:19,1:21:5.93:97,0,6	0/0:15,0:15:23.65:0,24,311	0/1:27,4:33:0.48:1,0,0	0/1:21,3:26:0.25:1,0,0	0/0:34,0:33:60.06:0,60,934	0/0:39,0:38:79.50:0,80,1512	0/1:7,1:8:8.55:9,0,25	0/0:14,0:11:32.91:0,33,484	0/0:32,0:32:70.07:0,70,1084	0/0:69,0:69:99:0,156,3205	0/1:45,6:54:0.56:1,0,1	0/0:21,1:22:33.93:0,34,525	0/0:35,0:35:64.29:0,64,976	0/0:25,0:25:53.81:0,54,757	0/0:25,0:25:52.26:0,52,1325	0/0:27,0:27:54.21:0,54,598	0/0:14,0:13:35.97:0,36,540
chr10	88409862	.	AATGTGAC	A	155.44	PASS	AB=0.975;AC=11;AF=0.196;AN=56;BaseQRankSum=7.851;DP=866;FS=6.011;HRun=0;HaplotypeScore=300.0841;InbreedingCoeff=0.5128;MQ=48.67;MQ0=27;MQRankSum=-7.612;QD=0.72;ReadPosRankSum=-1.226;VQSLOD=1.6909;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:30:59.87:0,60,3027	0/0:6,0:6:18.05:0,18,610	0/0:88,0:18:23.61:0,24,991	0/0:87,0:21:27.50:0,28,1058	0/0:22,0:22:42.53:0,43,1426	1/1:32,2:34:6.29:67,6,0	0/1:13,0:12:16.13:16,0,19	0/0:39,0:38:99:0,111,3818	1/1:24,2:26:2.52:25,3,0	0/0:23,0:23:66.23:0,66,2539	0/0:15,0:15:45.15:0,45,1723	1/1:20,1:21:3.07:111,3,0	0/0:14,0:14:27.98:0,28,909	0/1:33,0:33:1.01:2,0,1	0/1:24,1:26:0.98:1,0,1	0/0:34,0:33:63.22:0,63,2093	0/0:35,0:34:79.35:0,79,2990	0/1:8,0:8:21.72:61,0,22	0/0:11,0:10:30.10:0,30,1087	0/0:32,0:32:72.17:0,72,2540	0/0:68,0:68:99:0,180,6906	0/1:51,1:54:1.15:2,0,1	0/0:21,0:21:34.53:0,35,1286	0/0:35,0:35:64.21:0,64,2263	0/0:24,0:24:48.64:0,49,1718	0/0:25,0:25:61.99:0,62,2770	0/0:26,0:26:45.07:0,45,1381	0/0:13,0:12:36.04:0,36,1162
chr10	88409865	.	GTGAC	G	390.48	PASS	AB=0.980;AC=13;AF=0.232;AN=56;BaseQRankSum=8.608;DP=870;FS=0.000;HRun=0;HaplotypeScore=267.7520;InbreedingCoeff=0.4846;MQ=48.24;MQ0=27;MQRankSum=-8.920;QD=0.96;ReadPosRankSum=-0.554;VQSLOD=2.0140;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:72.25:0,72,1972	0/0:6,0:6:18.06:0,18,468	0/1:98,0:20:21.82:22,0,818	0/1:91,0:21:37.79:38,0,764	0/0:20,0:20:35.97:0,36,940	1/1:33,1:34:8.21:83,8,0	0/1:14,0:13:32.03:72,0,32	0/0:35,0:34:99:0,99,2455	1/1:18,8:26:5.68:103,6,0	0/0:24,0:24:72.22:0,72,1767	0/0:15,0:15:45.15:0,45,1115	1/1:21,0:21:11.19:136,11,0	0/0:14,0:14:27.06:0,27,629	0/1:33,0:33:0.86:1,0,1	0/1:24,2:26:0.58:1,0,1	0/0:31,0:30:60.05:0,60,1405	0/0:33,0:32:48.77:0,49,1828	0/1:8,0:8:1.61:81,0,2	0/0:12,0:10:30.10:0,30,763	0/0:34,0:34:72.15:0,72,1806	0/0:68,0:68:99:0,171,4559	0/1:50,4:54:0.77:2,0,1	0/0:21,0:21:33.57:0,34,900	0/0:35,0:35:60.17:0,60,1598	0/0:23,0:23:42.09:0,42,1149	0/0:24,0:24:34.56:0,35,1678	0/0:27,0:27:45.11:0,45,1026	0/0:12,0:11:33.11:0,33,750
chr10	88409867	.	GAC	G	397.79	PASS	AB=0.652;AC=12;AF=0.214;AN=56;BaseQRankSum=8.096;DP=865;FS=10.733;HRun=0;HaplotypeScore=244.2437;InbreedingCoeff=0.7329;MQ=48.20;MQ0=30;MQRankSum=-7.433;QD=1.89;ReadPosRankSum=-0.138;VQSLOD=0.8655;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:73.22:0,73,1535	0/0:6,0:6:18.06:0,18,353	0/0:97,2:20:31.69:0,32,705	0/0:91,1:21:48.49:0,48,725	0/0:20,0:20:36.49:0,36,703	1/1:9,20:32:9.94:72,10,0	0/1:4,10:13:29.90:43,0,30	0/0:34,0:33:99:0,99,1927	1/1:16,8:26:5.79:71,6,0	0/0:25,0:24:72.03:0,72,1339	0/0:15,0:15:45.15:0,45,859	1/1:12,9:21:14.03:176,14,0	0/0:14,0:14:29.14:0,29,476	0/1:12,16:31:0.40:1,0,0	0/1:14,12:26:0.25:1,0,0	0/0:31,0:30:60.05:0,60,1112	0/0:33,0:32:56.71:0,57,1452	1/1:3,4:7:14.91:182,15,0	0/0:13,0:10:30.10:0,30,595	0/0:33,0:33:72.18:0,72,1393	0/0:67,0:67:99:0,173,3446	0/1:27,25:53:0.09:2,0,0	0/0:21,0:21:33.57:0,34,670	0/0:35,0:35:60.17:0,60,1194	0/0:22,0:22:42.12:0,42,852	0/0:25,0:25:41.55:0,42,1324	0/0:24,1:25:45.12:0,45,820	0/0:12,0:11:33.11:0,33,598
chr10	88409885	.	G	GTA	131.69	PASS	AB=0.924;AC=9;AF=0.161;AN=56;BaseQRankSum=8.082;DP=946;FS=7.434;HRun=0;HaplotypeScore=288.3193;InbreedingCoeff=0.3338;MQ=45.18;MQ0=47;MQRankSum=-6.065;QD=0.51;ReadPosRankSum=-2.426;VQSLOD=1.2358;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:79.38:0,79,1076	0/0:12,0:12:33.08:0,33,458	0/0:63,0:14:41.48:0,41,545	0/0:65,0:18:40.10:0,40,575	0/0:27,0:26:12.91:0,13,408	1/1:24,10:34:11.49:74,11,0	0/1:27,4:25:29.73:64,0,30	0/0:51,0:40:99:0,108,1480	0/1:32,0:32:27.23:31,0,27	0/0:39,0:28:84.25:0,84,1185	0/0:18,0:18:54.17:0,54,801	0/1:23,3:25:10.19:27,0,10	0/0:20,0:19:31.12:0,31,406	0/1:28,4:32:0.47:1,0,0	0/1:30,2:31:0.01:0,0,0	0/0:31,0:29:40.26:0,40,639	0/0:34,0:33:72.05:0,72,1024	0/1:8,0:8:36.63:59,0,37	0/0:24,0:15:36.13:0,36,446	0/0:38,0:37:53.77:0,54,810	0/0:78,0:75:99:0,194,2784	0/1:51,10:60:0.38:1,0,0	0/0:19,0:19:29.17:0,29,409	0/0:39,0:39:58.88:0,59,799	0/0:25,0:25:29.97:0,30,585	0/0:35,0:30:87.15:0,87,1158	0/0:20,0:19:31.52:0,32,359	0/0:13,0:11:33.04:0,33,476
chr10	88409887	.	GTGTA	G	114.30	PASS	AB=0.966;AC=10;AF=0.179;AN=56;BaseQRankSum=7.639;DP=944;FS=10.642;HRun=0;HaplotypeScore=299.2130;InbreedingCoeff=0.4338;MQ=44.48;MQ0=47;MQRankSum=-4.033;QD=0.43;ReadPosRankSum=-1.468;VQSLOD=0.3706;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:39:1.97:2,0,1243	0/0:12,0:12:33.10:0,33,663	0/0:60,0:14:25.22:0,25,555	0/0:63,0:17:35.38:0,35,490	0/0:27,0:26:41.81:0,42,760	1/1:32,2:34:5.50:44,6,0	0/1:28,2:24:10.43:83,0,10	0/0:51,0:40:99:0,111,2108	0/0:31,0:31:0.77:0,1,13	0/0:39,0:28:78.25:0,78,1745	0/0:17,0:17:51.16:0,51,1265	0/1:26,2:27:20.92:21,0,30	0/0:20,0:19:32.53:0,33,631	0/1:31,1:32:0.32:0,0,1	0/1:31,1:31:0.28:0,0,1	0/0:32,1:31:19.72:0,20,876	0/0:34,0:34:60.25:0,60,1514	1/1:7,0:8:5.21:81,5,0	0/0:24,0:15:36.26:0,36,582	0/0:37,0:36:56.83:0,57,1111	0/0:78,0:75:99:0,179,3934	0/1:59,1:59:0.77:1,0,1	0/0:18,0:18:27.54:0,28,589	0/0:39,0:39:50.23:0,50,1190	0/0:26,0:26:27.19:0,27,1035	0/0:37,0:31:62:0,62,1589	0/0:21,0:20:29.92:0,30,502	0/0:13,0:11:32.14:0,32,692
chr10	88409890	.	T	TGC	166.07	PASS	AB=0.862;AC=7;AF=0.125;AN=56;BaseQRankSum=7.105;DP=916;FS=2.006;HRun=0;HaplotypeScore=277.0484;InbreedingCoeff=0.4427;MQ=44.40;MQ0=46;MQRankSum=-4.650;QD=0.79;ReadPosRankSum=-3.439;VQSLOD=1.7870;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:74.90:0,75,1099	0/0:13,0:13:33.09:0,33,484	0/0:56,0:14:41.97:0,42,564	0/0:55,0:16:35.34:0,35,582	0/0:27,0:26:13.55:0,14,441	1/1:30,3:33:12.82:206,13,0	0/1:27,2:23:47.94:55,0,48	0/0:53,0:40:99:0,120,1621	0/0:30,1:31:5.64:0,6,45	0/0:38,0:27:78.23:0,78,1164	0/0:17,0:17:51.17:0,51,828	0/1:24,4:27:11.72:12,0,69	0/0:20,0:19:35.32:0,35,450	0/1:25,5:30:0.04:0,0,1	0/1:28,5:31:0.23:0,0,1	0/0:31,0:29:31.47:0,31,598	0/0:35,0:35:84.46:0,84,1147	0/0:8,0:8:20.68:0,21,132	0/0:25,0:16:45.65:0,46,486	0/0:35,0:34:44.90:0,45,770	0/0:75,0:71:99:0,183,2784	0/1:41,17:57:1.31:1,0,2	0/0:17,0:17:27.05:0,27,378	0/0:39,0:39:66.01:0,66,913	0/0:27,0:27:39.42:0,39,694	0/0:33,0:27:78.13:0,78,1108	0/0:20,0:18:35.46:0,35,381	0/0:13,0:11:33.07:0,33,507
chr10	88409895	.	GTGTA	G	102.21	PASS	AB=0.925;AC=9;AF=0.161;AN=56;BaseQRankSum=6.912;DP=899;FS=0.833;HRun=0;HaplotypeScore=292.0667;InbreedingCoeff=0.3277;MQ=42.60;MQ0=48;MQRankSum=-3.566;QD=0.46;ReadPosRankSum=-2.510;VQSLOD=1.9755;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:23.47:0,23,1294	0/0:12,0:12:27.09:0,27,674	0/0:44,1:12:2.95:0,3,315	0/0:44,0:13:4.60:0,5,225	0/0:27,0:26:38.93:0,39,734	1/1:32,2:34:4.87:113,5,0	0/1:29,2:25:23.08:23,0,69	0/0:55,0:40:99:0,120,2612	1/1:25,5:30:2.67:10,3,0	0/0:37,0:25:74.05:0,74,1747	0/0:16,0:16:48.16:0,48,1284	0/1:25,2:27:15.65:61,0,16	0/0:22,0:21:40.02:0,40,687	0/0:27,5:32:2.55:0,3,16	0/1:30,3:31:0.28:0,0,1	0/0:29,0:27:33.43:0,33,824	0/0:34,0:34:62.56:0,63,1733	0/1:10,0:10:10.58:11,0,31	0/0:24,0:16:45.12:0,45,839	0/0:31,0:30:50.94:0,51,1036	0/0:79,0:73:99:0,162,3926	0/1:48,9:56:0.52:1,0,1	0/0:18,0:18:27.54:0,28,596	0/0:40,0:40:55.98:0,56,1234	0/0:27,0:27:12.86:0,13,971	0/0:33,0:27:75.20:0,75,1758	0/0:21,0:19:36.58:0,37,645	0/0:14,0:11:32.78:0,33,594
chr10	88409899	.	A	ATG	358.08	PASS	AB=0.962;AC=16;AF=0.286;AN=56;BaseQRankSum=9.203;DP=881;FS=9.168;HRun=0;HaplotypeScore=272.2253;InbreedingCoeff=0.0191;MQ=42.88;MQ0=47;MQRankSum=-2.049;QD=0.85;ReadPosRankSum=-6.206;VQSLOD=0.1610;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:47.77:0,48,659	0/0:13,0:13:29.96:0,30,374	0/0:31,0:8:18.05:0,18,217	0/0:32,1:7:6.01:0,6,66	0/1:29,0:28:60.83:61,0,243	1/1:25,8:33:7.13:47,7,0	0/1:27,4:26:50.18:81,0,50	0/0:58,0:40:99:0,102,1289	0/1:31,0:31:1.11:1,0,9	0/0:38,0:26:62.17:0,62,780	0/0:16,0:16:48.16:0,48,638	1/1:27,1:27:0.34:16,0,0	0/1:27,0:26:1.77:2,0,282	0/0:28,1:29:2.26:0,2,14	0/1:29,2:29:0.11:0,0,0	0/0:28,0:26:17.26:0,17,372	0/0:33,0:33:60.77:0,61,909	0/1:9,0:11:7.15:7,0,22	0/0:22,0:15:7.85:0,8,288	0/1:33,0:32:53.94:54,0,303	0/0:76,0:70:99:0,147,1885	0/1:47,9:56:0.33:1,0,0	0/1:18,0:18:3.95:4,0,243	0/1:39,0:39:46.50:46,0,434	0/1:23,4:27:99:143,0,382	0/0:33,0:27:75.22:0,75,954	0/1:24,0:22:34.18:34,0,192	0/0:14,0:11:20.86:0,21,253
chr10	88409905	.	GTA	G	86.33	PASS	AB=0.971;AC=13;AF=0.232;AN=56;BaseQRankSum=7.122;DP=849;FS=0.595;HRun=0;HaplotypeScore=263.1486;InbreedingCoeff=0.3340;MQ=43.08;MQ0=46;MQRankSum=-1.109;QD=0.31;ReadPosRankSum=-5.689;VQSLOD=1.3485;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:31.31:0,31,902	0/0:13,0:13:33.11:0,33,567	0/0:22,0:8:20.45:0,20,141	0/0:20,0:3:5.86:0,6,37	0/0:27,0:26:37.70:0,38,438	1/1:34,1:35:8.44:47,8,0	0/1:30,1:26:28.31:63,0,28	0/0:56,0:37:99:0,111,1744	1/1:31,0:31:3.56:11,4,0	0/0:36,0:24:43.29:0,43,1081	0/0:16,0:16:48.15:0,48,887	0/1:27,0:26:4.32:15,0,4	0/0:28,0:27:16.02:0,16,457	0/0:30,0:30:2.67:0,3,15	1/1:30,0:28:2.85:24,3,0	0/1:31,0:28:16.69:17,0,437	0/0:33,0:33:58.84:0,59,1264	0/1:12,1:13:7.73:8,0,53	0/0:22,1:17:4.29:0,4,433	0/0:30,0:29:33.75:0,34,515	0/0:74,0:68:99:0,162,2747	1/1:58,3:60:2.28:9,2,0	0/0:18,0:18:26.28:0,26,350	0/0:38,1:39:44.79:0,45,770	0/0:26,0:26:22.52:0,23,586	0/0:32,0:26:65.95:0,66,1124	0/1:22,1:21:39.68:40,0,303	0/0:10,0:7:21.07:0,21,385
chr10	88409917	.	A	ATGTGTGTG	4699.23	PASS	AB=0.915;AC=21;AF=0.375;AN=56;BaseQRankSum=-4.260;DP=853;FS=20.535;HRun=0;HaplotypeScore=298.3224;InbreedingCoeff=0.6841;MQ=44.17;MQ0=42;MQRankSum=1.890;QD=15.31;ReadPosRankSum=-1.364;VQSLOD=2.2938;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:38:56.93:0,57,884	0/0:13,0:15:32.68:0,33,547	0/1:10,0:6:11.99:12,0,97	0/1:11,0:6:11.30:26,0,11	1/1:21,2:24:14.81:321,15,0	0/0:34,0:35:12.47:0,12,124	0/0:35,0:30:13.30:0,13,103	0/0:58,0:39:26.15:0,26,327	0/1:19,0:29:18.06:34,0,18	0/0:40,0:30:56.97:0,57,927	0/0:18,0:18:23.24:0,23,644	0/0:25,0:25:1.76:0,2,16	1/1:34,0:34:45.11:518,45,0	0/0:30,0:30:1.56:0,2,16	0/0:32,0:30:8.20:0,8,98	1/1:26,1:25:26.33:363,26,0	0/0:30,0:31:25.97:0,26,942	0/0:15,0:15:34.38:0,34,302	1/1:18,6:22:27.82:499,28,0	1/1:28,1:28:24.52:489,25,0	0/0:73,0:67:31.74:0,32,1669	0/0:56,0:55:5.40:0,5,105	1/1:17,0:17:18.01:231,18,0	1/1:40,0:41:51.10:1021,51,0	1/1:28,0:29:38.99:525,39,0	0/0:32,0:25:13.84:0,14,567	1/1:25,0:23:53.81:662,54,0	0/0:10,0:7:15.04:0,15,380
chr10	88410255	.	G	GA	6390.84	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=17.973;DP=717;FS=21.031;HRun=2;HaplotypeScore=122.1251;InbreedingCoeff=0.9998;MQ=82.50;MQ0=0;MQRankSum=-14.874;QD=34.73;ReadPosRankSum=-0.572;VQSLOD=2.7209;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,135,1621	0/0:14,0:14:36.11:0,36,446	0/0:29,0:29:46.62:0,47,835	0/0:24,0:24:60.79:0,61,737	0/0:25,0:25:66.17:0,66,790	1/1:3,21:24:63.13:860,63,0	1/1:5,18:23:60.10:798,60,0	0/0:31,0:31:90.23:0,90,1043	1/1:3,29:32:81.24:1142,81,0	0/0:27,0:27:75.22:0,75,909	0/0:19,0:19:54.16:0,54,652	1/1:2,20:22:54.18:776,54,0	0/0:26,0:26:75.22:0,75,917	1/1:3,23:26:69.11:923,69,0	1/1:2,18:20:51.14:710,51,0	0/0:27,0:27:81.24:0,81,992	0/0:30,0:30:87.24:0,87,1062	1/1:3,15:18:36.12:517,36,0	0/0:23,0:23:66.18:0,66,794	0/0:28,0:28:84.25:0,84,1029	0/0:37,0:37:99:0,111,1364	1/1:3,16:19:51.04:663,51,0	0/0:23,0:23:60.19:0,60,744	0/0:32,0:32:84.22:0,84,1003	0/0:27,0:27:75.23:0,75,930	0/0:28,0:28:84.21:0,84,1013	0/0:24,0:24:72.23:0,72,892	0/0:9,0:9:27.08:0,27,335
chr10	88410270	.	T	TTA	7296.34	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.937;DP=687;FS=26.024;HRun=0;HaplotypeScore=142.1636;InbreedingCoeff=0.9998;MQ=83.97;MQ0=0;MQRankSum=-16.792;QD=48.97;ReadPosRankSum=-1.032;VQSLOD=3.0754;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,1900	0/0:16,0:16:45.15:0,45,658	0/0:30,0:30:82.80:0,83,1106	0/0:21,0:21:51.14:0,51,721	0/0:23,0:23:63.21:0,63,925	1/1:2,21:23:66.23:1212,66,0	1/1:2,22:24:72.25:1321,72,0	0/0:29,0:29:81.26:0,81,1161	0/0:26,0:26:75.25:0,75,1101	0/0:26,0:26:69.23:0,69,1001	0/0:16,0:16:47.37:0,47,669	1/1:3,18:21:57.19:1042,57,0	0/0:27,0:27:81.27:0,81,1193	1/1:5,20:25:60.19:1085,60,0	1/1:2,19:21:60.21:1101,60,0	0/0:30,0:30:87.27:0,87,1242	0/0:29,0:29:87.28:0,87,1260	1/1:6,12:17:39.13:717,39,0	0/0:28,0:28:84.28:0,84,1237	0/0:25,0:25:75.22:0,75,1064	0/0:35,0:35:99:0,105,1507	1/1:3,14:17:45.15:820,45,0	0/0:20,0:20:57.18:0,57,820	0/0:25,0:25:69.23:0,69,1016	0/0:27,0:27:81.27:0,81,1193	0/0:28,0:28:84.28:0,84,1237	0/0:22,0:22:66.21:0,66,950	0/0:9,0:9:27.05:0,27,356
chr10	88410319	.	GCT	G	3837.65	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.554;DP=630;FS=3.288;HRun=0;HaplotypeScore=156.2786;InbreedingCoeff=0.9925;MQ=79.28;MQ0=0;MQRankSum=-16.054;QD=26.11;ReadPosRankSum=1.921;VQSLOD=4.6603;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,2391	0/0:11,0:11:30.10:0,30,539	0/0:21,0:21:51.12:0,51,838	0/0:16,0:16:48.13:0,48,769	0/0:30,0:30:87.28:0,87,1532	1/1:12,7:19:51.13:581,51,0	1/1:10,12:22:45.13:556,45,0	0/0:36,0:36:99:0,108,1945	1/1:12,6:18:48.08:526,48,0	0/0:32,0:32:96.32:0,96,1701	0/0:11,0:11:30.10:0,30,532	1/1:12,5:17:42.09:470,42,0	0/0:28,0:28:78.25:0,78,1372	1/1:13,7:20:51.11:552,51,0	1/1:21,3:23:66.09:664,66,0	0/0:24,0:24:72.25:0,72,1285	0/0:35,0:34:99:0,105,1852	1/1:9,1:9:21.05:226,21,0	0/0:22,0:22:51.14:0,51,881	0/0:13,0:13:36.12:0,36,648	0/0:37,0:37:93.32:0,93,1669	1/1:13,4:17:17.75:263,18,0	0/0:16,0:16:42.14:0,42,756	0/0:32,0:32:90.31:0,90,1621	0/0:16,0:16:48.16:0,48,863	0/0:31,0:31:90.26:0,90,1558	0/0:21,0:21:60.19:0,60,1022	0/0:4,0:4:12.04:0,12,216
chr10	88410323	.	T	TGGACC	9678.37	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.688;DP=624;FS=3.233;HRun=0;HaplotypeScore=166.0642;InbreedingCoeff=0.9940;MQ=81.06;MQ0=0;MQRankSum=-16.184;QD=72.77;ReadPosRankSum=2.761;VQSLOD=6.4440;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,3109	0/0:10,0:10:30.10:0,30,680	0/0:20,0:20:60.08:0,60,1195	0/0:19,0:19:54.18:0,54,1035	0/0:32,0:32:96.27:0,96,2058	1/1:7,11:18:51.17:1401,51,0	1/1:12,6:18:45.15:991,45,0	0/0:39,0:39:99:0,114,2534	1/1:10,7:17:48.11:1086,48,0	0/0:36,0:36:99:0,102,2243	0/0:12,0:12:36.10:0,36,661	1/1:6,9:15:42.14:1136,42,0	0/0:27,0:27:78.25:0,78,1722	1/1:7,13:20:51.17:1495,51,0	1/1:3,19:22:66.18:1985,66,0	0/0:26,0:26:75.24:0,75,1643	0/0:37,0:36:99:0,111,2408	1/1:1,7:7:21.07:695,21,0	0/0:19,0:19:57.18:0,57,1164	0/0:14,0:14:36.12:0,36,823	0/0:34,0:34:96.31:0,96,2135	1/1:4,10:14:32.14:890,32,0	0/0:14,0:14:42.14:0,42,961	0/0:30,0:30:90.31:0,90,2049	0/0:17,0:17:51.16:0,51,1144	0/0:32,0:32:96.25:0,96,2004	0/0:22,0:22:66.20:0,66,1402	0/0:4,0:4:12.04:0,12,278
chr10	88410328	.	A	AGGGG	6826.36	PASS	AB=0.668;AC=11;AF=0.196;AN=56;BaseQRankSum=14.082;DP=633;FS=0.000;HRun=2;HaplotypeScore=168.1608;InbreedingCoeff=0.3542;MQ=83.57;MQ0=0;MQRankSum=-13.077;QD=48.76;ReadPosRankSum=5.438;VQSLOD=3.6159;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,2899	0/0:11,0:11:33.06:0,33,605	0/0:24,0:24:61.99:0,62,1230	0/0:20,0:20:57.12:0,57,1007	0/0:32,0:32:93.32:0,93,1929	0/1:9,11:20:99:897,0,178	0/1:14,6:20:99:472,0,303	0/0:36,0:36:99:0,108,2228	0/1:9,7:16:99:658,0,200	0/0:34,0:34:99:0,102,2089	0/0:12,0:12:36.02:0,36,579	0/1:6,9:15:99:733,0,152	0/0:29,0:29:81.19:0,81,1539	0/1:7,13:20:83.21:1068,0,83	1/1:5,20:24:11.36:1615,11,0	0/0:24,0:24:72.23:0,72,1471	0/0:35,0:34:99:0,105,2200	1/1:1,7:7:21.07:604,21,0	0/0:15,0:15:42.14:0,42,872	0/0:15,0:15:42.08:0,42,797	0/0:32,0:32:93.32:0,93,1946	1/1:6,9:16:1.66:780,2,0	0/0:15,0:15:45.13:0,45,890	0/0:30,0:30:90.25:0,90,1790	0/0:19,0:19:57.16:0,57,1110	0/0:35,0:35:99:0,99,1881	0/0:22,0:22:66.12:0,66,1295	0/0:4,0:4:12.04:0,12,251
chr10	88411575	.	C	CGTGT	3627.57	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=5.624;DP=738;FS=26.077;HRun=0;HaplotypeScore=185.5343;InbreedingCoeff=0.8479;MQ=61.75;MQ0=8;MQRankSum=-3.782;QD=9.47;ReadPosRankSum=-4.286;VQSLOD=0.6732;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:35:63.07:0,63,923	0/0:9,0:9:21.05:0,21,296	0/0:35,0:18:11.86:0,12,132	0/1:32,0:25:6.74:7,0,225	0/0:19,0:18:18.04:0,18,232	1/1:10,12:25:8.70:139,9,0	1/1:14,16:33:8.39:133,8,0	1/1:25,0:24:25.35:290,25,0	1/1:17,0:18:9.01:95,9,0	0/0:34,0:34:54:0,54,724	0/0:12,0:12:24.08:0,24,369	1/1:23,5:26:23.95:396,24,0	0/0:33,0:33:41.29:0,41,522	1/1:16,3:21:26.41:359,26,0	1/1:31,5:38:36.12:659,36,0	0/0:26,0:26:21.06:0,21,319	0/0:35,0:35:68.95:0,69,1082	1/1:11,7:21:44.52:836,45,0	0/0:18,0:18:29.23:0,29,329	0/0:26,0:26:15.03:0,15,205	1/1:39,0:39:8.90:74,9,0	1/1:10,20:39:6.02:108,6,0	0/0:18,0:17:6.02:0,6,88	0/0:30,0:30:15:0,15,209	1/1:16,0:21:11.44:93,11,0	1/1:37,0:36:54.25:376,54,0	0/0:25,0:25:16.82:0,17,190	1/1:5,0:5:6.88:64,7,0
chr10	88411599	.	TGAGAGA	T	4127.45	PASS	AB=0.852;AC=21;AF=0.375;AN=56;BaseQRankSum=1.703;DP=704;FS=11.100;HRun=0;HaplotypeScore=195.3776;InbreedingCoeff=0.6536;MQ=44.52;MQ0=14;MQRankSum=-3.821;QD=16.12;ReadPosRankSum=-1.653;VQSLOD=2.0260;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:84.19:0,84,2155	0/0:8,0:8:5.58:0,6,359	0/0:41,0:9:15.05:0,15,307	0/0:35,0:13:2.62:0,3,61	1/1:18,3:22:21.06:396,21,0	0/0:22,0:22:17.87:0,18,227	0/0:33,0:32:29.78:0,30,348	0/1:14,0:13:13.51:17,0,14	0/0:14,0:13:5.58:0,6,49	0/0:38,0:38:96.11:0,96,2480	0/0:16,0:16:27.09:0,27,803	0/0:24,0:23:32.92:0,33,575	1/1:18,12:30:42.61:840,43,0	0/0:17,0:18:29.78:0,30,629	0/0:32,0:32:40.62:0,41,655	1/1:12,6:19:24.80:509,25,0	0/0:35,0:35:90.27:0,90,2695	0/0:28,0:28:37.25:0,37,988	1/1:16,3:17:17.98:355,18,0	1/1:12,15:30:23.82:504,24,0	0/0:23,0:24:0:0,0,0	0/0:36,0:36:23.23:0,23,279	1/1:9,9:17:9.03:185,9,0	1/1:22,5:28:14.44:262,14,0	0/1:21,0:21:41.39:165,0,41	0/1:14,2:26:92.38:511,0,92	1/1:5,14:19:18.02:331,18,0	1/1:2,0:4:3.01:52,3,0
chr10	88411600	.	GAGAGAGAGAGAGAGAGAGAGTGTATGTGTGTGTGTGTA	G	1325.34	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=0.848;DP=678;FS=2.848;HRun=0;HaplotypeScore=476.9987;InbreedingCoeff=0.0582;MQ=44.75;MQ0=13;MQRankSum=-2.149;QD=5.74;ReadPosRankSum=-4.072;VQSLOD=0.2521;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:96.33:0,96,8197	0/0:8,0:8:24.07:0,24,1489	0/0:41,0:10:30.09:0,30,1044	0/0:35,0:12:2.04:0,2,529	0/0:22,0:21:36.11:0,36,2239	0/0:22,0:22:23.94:0,24,1827	0/1:31,0:30:26.92:27,0,2149	1/1:4,9:10:28.54:468,29,0	0/1:10,0:9:31.78:32,0,141	0/0:38,0:38:99:0,105,7572	0/0:16,0:16:33.11:0,33,3018	0/1:24,0:22:13.17:13,0,2923	0/0:30,0:30:66.30:0,66,3723	0/1:17,0:17:41.10:41,0,2247	0/1:32,0:32:99:222,0,2682	0/0:18,0:18:39.07:0,39,2219	0/0:34,0:34:99:0,99,9161	0/1:28,0:28:99:160,0,3693	0/0:17,0:15:45.01:0,45,1648	0/0:29,0:29:39.17:0,39,2476	1/1:24,0:21:8.04:95,8,0	0/0:35,0:35:24.08:0,24,2380	0/0:18,0:17:15.05:0,15,1019	0/0:27,0:27:24.96:0,25,1544	0/1:21,0:21:96.77:97,0,1257	0/1:26,0:24:99:244,0,2466	0/0:17,0:17:20.67:0,21,1355	0/1:5,0:4:87.72:88,0,352
chr10	88411673	.	AGTGT	A	7358.22	PASS	AB=0.616;AC=26;AF=0.464;AN=56;BaseQRankSum=0.625;DP=867;FS=16.912;HRun=0;HaplotypeScore=186.7555;InbreedingCoeff=0.8303;MQ=54.33;MQ0=23;MQRankSum=-1.429;QD=20.38;ReadPosRankSum=2.298;VQSLOD=3.6274;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:81.23:0,81,1849	0/0:15,0:14:33.11:0,33,795	0/0:58,0:23:36.71:0,37,831	0/0:96,0:31:35.60:0,36,710	1/1:7,22:29:39.11:606,39,0	0/0:10,0:13:16.76:0,17,81	0/0:26,0:38:39.12:0,39,188	1/1:20,8:25:39.10:565,39,0	1/1:3,28:31:53.70:897,54,0	0/0:43,0:43:96.31:0,96,2143	0/0:16,0:16:33.11:0,33,796	0/0:15,0:26:47.22:0,47,218	1/1:8,20:28:42.14:703,42,0	0/0:14,0:29:43.49:0,43,200	0/0:19,0:47:60.69:0,61,288	1/1:9,14:22:27.09:455,27,0	0/0:30,0:30:72.03:0,72,1657	0/0:14,0:17:25.31:0,25,122	1/1:7,16:20:45.15:736,45,0	1/1:12,16:27:26.78:443,27,0	1/1:21,19:37:2.54:51,3,0	0/0:12,0:24:35.85:0,36,176	1/1:7,14:20:24.07:378,24,0	0/1:9,18:27:14.57:90,0,15	1/1:7,19:26:39.09:631,39,0	1/1:8,22:29:75.26:1256,75,0	1/1:3,16:17:27.54:443,28,0	0/1:3,4:7:55.46:105,0,55
chr10	88411723	.	AGT	A	3030.21	PASS	AB=0.591;AC=37;AF=0.685;AN=54;BaseQRankSum=9.328;DP=819;FS=2.121;HRun=0;HaplotypeScore=175.4951;InbreedingCoeff=0.8133;MQ=52.86;MQ0=32;MQRankSum=-8.721;QD=6.17;ReadPosRankSum=-1.288;VQSLOD=3.4165;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,1:43:53.27:0,53,1261	0/0:13,0:13:36.12:0,36,595	0/0:48,0:13:26.98:0,27,408	0/0:81,0:26:25.82:0,26,444	./.	1/1:21,0:21:2.62:11,3,0	1/1:29,0:25:4.91:27,5,0	1/1:26,10:27:38.93:411,39,0	1/1:14,18:30:20.93:236,21,0	0/0:41,0:39:92.62:0,93,1428	0/0:14,0:13:36.12:0,36,594	1/1:21,0:21:9.67:50,10,0	1/1:6,12:18:30.04:324,30,0	1/1:22,0:23:10.19:73,10,0	1/1:43,0:42:4.33:30,4,0	1/1:8,19:26:23.41:272,23,0	0/0:29,0:29:63.78:0,64,1086	1/1:10,0:9:12.83:67,13,0	1/1:16,6:12:24.08:303,24,0	1/1:10,16:23:2.70:38,3,0	1/1:38,14:47:11.94:93,12,0	1/1:33,0:33:5.94:50,6,0	0/1:4,9:12:0:0,0,0	1/1:19,11:30:4.86:31,5,0	0/0:35,0:34:57.14:0,57,854	1/1:8,16:22:47.91:605,48,0	1/1:2,19:20:26.90:305,27,0	1/1:0,9:9:24.08:301,24,0
chr10	88411733	.	TGTGA	T	487.78	PASS	AB=0.828;AC=11;AF=0.196;AN=56;BaseQRankSum=5.184;DP=812;FS=1.479;HRun=0;HaplotypeScore=210.9320;InbreedingCoeff=0.0974;MQ=55.17;MQ0=19;MQRankSum=-1.245;QD=2.26;ReadPosRankSum=-3.195;VQSLOD=2.1511;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,108,2328	0/0:13,0:13:36.12:0,36,930	0/0:50,0:22:40.92:0,41,799	0/0:81,0:30:52.71:0,53,790	0/0:22,0:22:5.99:0,6,50	1/1:5,14:19:3.13:57,3,0	1/1:15,11:22:5.33:109,5,0	0/0:30,0:24:46.93:0,47,388	0/0:31,0:29:27.86:0,28,205	0/0:36,0:34:87.30:0,87,2265	0/0:17,0:16:48.12:0,48,1080	0/1:16,5:20:62.16:165,0,62	0/0:24,0:24:8.81:0,9,257	0/1:16,7:23:99:102,0,122	0/1:29,10:39:15.09:15,0,88	0/0:30,0:29:41.14:0,41,346	0/0:31,0:31:74.43:0,74,1922	0/1:9,4:12:16.13:152,0,16	0/0:17,0:10:26.68:0,27,186	0/0:23,0:20:5.19:0,5,40	0/0:55,0:51:26.52:0,27,236	0/1:17,18:35:12.94:13,0,88	0/0:13,0:12:3:0,3,25	0/1:31,0:31:12.72:13,0,39	0/0:33,0:33:57.12:0,57,1407	0/0:21,0:18:19.05:0,19,231	0/0:21,0:20:25.54:0,26,157	0/1:9,0:9:1.39:1,0,113
chr10	88411755	.	A	AGTGT	11561.68	PASS	AB=0.647;AC=40;AF=0.714;AN=56;BaseQRankSum=2.045;DP=800;FS=11.036;HRun=0;HaplotypeScore=193.1661;InbreedingCoeff=0.7344;MQ=52.90;MQ0=10;MQRankSum=-4.128;QD=20.43;ReadPosRankSum=-0.764;VQSLOD=3.7750;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:51:99:0,126,2131	0/0:11,0:11:33.11:0,33,592	0/0:33,0:19:29.74:0,30,582	0/0:57,0:25:21.06:0,21,473	1/1:6,17:24:18.06:467,18,0	1/1:4,19:23:6.02:155,6,0	1/1:5,23:28:2.28:77,2,0	1/1:9,19:26:60.14:1409,60,0	1/1:7,21:26:30.10:741,30,0	0/0:31,0:31:90.30:0,90,1579	0/0:19,0:19:51.15:0,51,846	1/1:4,18:24:18.06:465,18,0	1/1:7,23:31:60.16:1448,60,0	1/1:4,21:26:20.77:545,21,0	1/1:13,21:35:9.05:234,9,0	1/1:9,24:34:43.70:1134,44,0	0/0:29,0:29:65.34:0,65,1348	0/1:7,6:12:8.39:486,0,8	1/1:11,4:8:12.04:296,12,0	1/1:10,18:28:9.75:283,10,0	1/1:14,42:60:23.53:623,24,0	1/1:6,21:27:5.86:156,6,0	1/1:6,5:11:11.49:281,11,0	1/1:16,15:34:10.35:256,10,0	1/1:7,0:35:55.73:278,56,0	0/1:9,16:24:44.66:1326,0,45	1/1:8,10:18:20.71:534,21,0	1/1:2,7:9:15.05:367,15,0
chr10	88411843	.	AGTGT	A	4276.03	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=3.377;DP=834;FS=39.274;HRun=0;HaplotypeScore=245.2843;InbreedingCoeff=0.9435;MQ=54.09;MQ0=23;MQRankSum=-0.358;QD=21.82;ReadPosRankSum=1.694;VQSLOD=3.1554;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:49:99:0,117,2700	0/0:15,0:15:45.15:0,45,1031	0/0:46,0:16:14.04:0,14,585	0/0:62,0:25:30.43:0,30,516	1/1:8,12:18:14.88:263,15,0	0/0:14,0:13:5.90:0,6,79	0/0:25,0:24:20.57:0,21,443	0/0:17,0:35:51.36:0,51,332	0/0:15,0:31:61.29:0,61,304	0/0:47,0:47:99:0,126,2864	0/0:27,0:27:62.83:0,63,1480	0/0:20,0:20:32.45:0,32,781	1/1:4,15:19:48.16:826,48,0	0/0:20,0:20:9.03:0,9,213	0/0:38,0:37:77.66:0,78,1599	1/1:15,19:33:57.63:914,58,0	0/0:37,0:35:90.56:0,91,2151	0/0:17,0:17:39.07:0,39,876	1/1:6,5:10:18.03:284,18,0	1/1:8,18:25:45.84:673,46,0	0/0:36,0:80:99:0,144,780	0/0:19,0:19:29.41:0,29,538	1/1:11,11:22:14.94:183,15,0	1/1:16,18:33:18.15:302,18,0	1/1:7,15:21:36.45:517,36,0	0/0:16,0:32:68.48:0,68,412	1/1:1,7:6:18.06:314,18,0	0/0:7,0:8:5.34:0,5,101
chr10	88411854	.	GTGTA	G	2093.27	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=7.099;DP=808;FS=52.154;HRun=0;HaplotypeScore=245.4895;InbreedingCoeff=0.8342;MQ=49.78;MQ0=26;MQRankSum=2.499;QD=11.50;ReadPosRankSum=2.422;VQSLOD=1.0783;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:44:99:0,119,2987	0/0:16,0:16:37.14:0,37,1038	0/0:49,0:15:30.10:0,30,791	0/0:65,0:23:25.65:0,26,558	1/1:20,0:18:14.13:138,14,0	0/0:14,0:13:5.64:0,6,106	0/0:21,0:20:20.72:0,21,349	0/0:32,0:28:65.44:0,65,532	0/0:35,0:32:66.33:0,66,508	0/0:48,0:48:99:0,141,3456	0/0:26,0:26:62.75:0,63,1581	0/0:18,0:18:32.86:0,33,785	1/1:19,0:18:47.18:511,47,0	0/0:15,0:15:9.03:0,9,218	0/0:37,0:36:78.11:0,78,1658	1/1:27,1:26:56.84:526,57,0	0/0:40,1:39:92.65:0,93,2473	0/0:17,0:17:42.06:0,42,873	0/1:10,0:8:18.50:117,0,19	1/1:24,2:25:22.24:320,22,0	0/0:82,0:80:99:0,142,1085	0/0:19,0:19:29.73:0,30,503	1/1:19,0:19:8.58:79,9,0	1/1:31,0:30:17.50:159,18,0	1/1:21,0:20:13.20:215,13,0	0/0:32,0:32:80.87:0,81,578	1/1:7,1:6:18.05:229,18,0	0/0:12,0:9:1.27:0,1,129
chr10	88411865	.	TGAGA	T	917.62	PASS	AB=0.636;AC=12;AF=0.214;AN=56;BaseQRankSum=3.225;DP=779;FS=2.188;HRun=0;HaplotypeScore=233.5476;InbreedingCoeff=0.6953;MQ=48.84;MQ0=29;MQRankSum=-3.078;QD=7.91;ReadPosRankSum=-0.015;VQSLOD=2.9613;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:99:0,117,2838	0/0:14,0:14:42.12:0,42,910	0/0:57,0:14:32.73:0,33,538	0/0:78,0:21:3.77:0,4,567	0/0:22,0:19:19.25:0,19,235	0/1:2,12:13:0:0,0,0	1/1:7,13:18:10.04:169,10,0	0/0:28,0:27:60.16:0,60,1374	0/0:40,0:36:75.21:0,75,1729	0/0:50,0:49:99:0,104,3177	0/0:22,0:22:55.05:0,55,1267	1/1:10,4:14:19.45:294,19,0	0/0:17,0:16:11.99:0,12,370	1/1:1,13:14:1.74:5,2,0	1/1:14,14:27:15.77:258,16,0	0/0:25,0:24:46.38:0,46,678	0/0:40,0:39:66.97:0,67,2282	0/1:7,4:11:39.44:333,0,39	0/0:11,0:8:16.72:0,17,327	0/0:26,0:25:29.99:0,30,379	0/0:73,0:71:99:0,143,3443	1/1:3,12:15:1.77:5,2,0	0/0:20,0:20:9.37:0,9,91	0/0:29,0:28:16.07:0,16,273	0/0:18,0:17:24.15:0,24,389	0/0:29,0:28:78.18:0,78,1712	0/0:8,0:6:13.09:0,13,185	0/0:11,0:8:16.64:0,17,436
chr10	88411871	.	AGAGTGTGTGT	A	3486.47	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=10.182;DP=758;FS=31.082;HRun=0;HaplotypeScore=276.4285;InbreedingCoeff=0.6345;MQ=47.33;MQ0=25;MQRankSum=-6.655;QD=10.76;ReadPosRankSum=-3.707;VQSLOD=1.0275;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:93.82:0,94,3883	0/0:15,0:15:45.13:0,45,1384	0/1:52,0:12:0.24:0,0,100	0/0:67,0:17:11.59:0,12,342	1/1:14,7:18:18.74:255,19,0	1/1:14,0:13:6.35:37,6,0	0/1:17,0:15:10.78:16,0,11	0/0:28,0:25:51.45:0,51,1181	0/0:38,0:35:66.13:0,66,2295	0/0:50,0:49:99:0,129,4242	0/0:23,0:23:53.60:0,54,1918	0/1:12,0:12:22.66:86,0,23	1/1:12,5:16:30.01:648,30,0	1/1:13,0:13:11.41:70,11,0	0/1:22,0:21:14.05:94,0,14	1/1:22,6:27:45.24:558,45,0	0/0:41,0:40:47.43:0,47,3146	0/0:9,0:9:14.62:0,15,70	1/1:13,1:9:15:278,15,0	1/1:19,6:24:35.30:493,35,0	0/0:74,0:74:99:0,137,4309	1/1:13,0:13:6.86:44,7,0	1/1:8,11:19:8.97:118,9,0	1/1:26,4:29:16.54:226,17,0	0/1:17,0:16:67.52:291,0,68	0/0:29,0:28:74.94:0,75,2320	1/1:8,2:8:20.89:272,21,0	0/0:12,0:9:19.97:0,20,508
chr10	88411873	.	AGTGTGTGTGAGT	A	2282.73	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=11.478;DP=764;FS=17.043;HRun=0;HaplotypeScore=301.4765;InbreedingCoeff=0.5442;MQ=47.13;MQ0=25;MQRankSum=-6.105;QD=7.90;ReadPosRankSum=-3.834;VQSLOD=0.5919;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:99:0,103,4873	0/0:15,0:15:45.13:0,45,1754	0/0:49,0:11:2:0,2,93	0/0:66,0:17:11.48:0,11,419	1/1:19,1:18:18:198,18,0	1/1:15,0:13:0.71:2,1,0	0/1:18,0:16:10.67:11,0,13	0/0:31,0:25:57.48:0,57,1641	0/0:38,0:35:66.23:0,66,2812	0/0:50,0:48:99:0,132,5203	0/0:23,0:23:53.82:0,54,2325	0/1:12,0:12:22.71:73,0,23	1/1:16,0:15:29.53:325,30,0	1/1:13,0:13:2.38:23,2,0	0/1:21,0:20:17.04:72,0,17	1/1:27,1:27:24.83:325,25,0	0/0:39,0:39:27.60:0,28,3752	0/0:11,0:11:17.93:0,18,84	1/1:15,1:9:11.41:199,11,0	1/1:26,0:25:31.73:356,32,0	0/0:75,0:76:99:0,140,5290	1/1:13,0:14:8.79:42,9,0	1/1:16,3:19:8.17:106,8,0	1/1:30,2:31:17.27:216,17,0	0/1:16,0:15:67.37:389,0,67	0/0:27,0:26:74.95:0,75,2871	1/1:10,0:8:9.17:137,9,0	0/1:12,0:9:7.02:7,0,583
chr10	88411881	.	TGA	T	648.04	PASS	AB=0.994;AC=12;AF=0.214;AN=56;BaseQRankSum=7.943;DP=758;FS=11.530;HRun=0;HaplotypeScore=217.9784;InbreedingCoeff=-0.0527;MQ=42.01;MQ0=27;MQRankSum=-1.087;QD=2.68;ReadPosRankSum=-2.524;VQSLOD=1.2460;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,1:45:45.79:0,46,1476	0/0:18,0:18:14.69:0,15,461	0/0:45,0:8:4.10:0,4,78	0/0:54,0:11:16.78:0,17,201	0/1:22,0:18:37.15:60,0,37	0/0:15,0:13:3.87:0,4,21	0/0:18,0:15:8.05:0,8,79	0/0:30,0:24:28.02:0,28,574	0/0:38,0:35:65.90:0,66,984	0/0:50,0:48:99:0,103,1636	0/0:24,0:24:56.70:0,57,812	0/0:9,0:9:0.17:0,0,28	0/1:15,0:14:44.65:122,0,45	0/1:13,0:13:0:0,0,0	0/1:21,0:20:0.07:0,0,23	0/1:30,0:29:97.96:170,0,98	0/0:38,0:37:52.84:0,53,1300	0/0:8,0:8:14.38:0,14,77	0/1:16,0:6:20.61:85,0,21	0/1:30,1:30:99:133,0,132	0/0:73,1:74:72.18:0,72,1322	0/0:19,0:19:3.62:0,4,28	0/1:19,0:19:16.10:16,0,33	1/1:30,0:29:12.24:92,12,0	0/0:17,0:16:18.47:0,18,136	0/1:33,1:33:35.17:35,0,649	0/1:11,0:9:53.42:75,0,53	0/0:12,0:10:6.41:0,6,194
chr10	88411883	.	A	AGT	1750.42	PASS	AB=0.918;AC=9;AF=0.173;AN=52;BaseQRankSum=-4.790;DP=770;FS=1.991;HRun=0;HaplotypeScore=216.7605;InbreedingCoeff=-0.1208;MQ=42.15;MQ0=27;MQRankSum=-1.426;QD=7.12;ReadPosRankSum=-2.167;VQSLOD=3.1559;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,1:46:25.24:0,25,649	0/1:19,0:20:10.15:10,0,237	./.	./.	0/0:22,0:19:11.83:0,12,79	0/0:14,0:14:4.81:0,5,39	0/0:17,0:16:2.79:0,3,19	0/1:29,1:24:16.02:170,0,16	0/0:38,0:35:44.38:0,44,511	0/1:51,0:49:35.97:36,0,562	0/0:22,0:24:38.72:0,39,440	0/0:6,0:8:5.83:0,6,34	0/0:15,0:14:20.38:0,20,117	0/0:10,0:15:11.88:0,12,85	0/0:18,0:22:8.81:0,9,55	0/0:29,0:28:18.05:0,18,105	0/0:35,0:37:70.45:0,70,741	1/1:7,0:8:0.47:1,0,0	0/1:16,0:6:30.12:30,0,37	0/0:31,0:30:17.75:0,18,106	0/1:62,12:74:48.01:861,0,48	0/0:12,0:18:6.37:0,6,37	0/0:21,0:21:8.76:0,9,54	0/0:26,0:27:11.72:0,12,70	0/0:10,0:17:20.78:0,21,118	0/1:26,9:34:40.40:710,0,40	0/0:12,0:10:11.82:0,12,88	0/1:8,3:10:36.16:57,0,36
chr10	88412005	.	TTGTGTG	T	2473.41	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=1.589;DP=916;FS=11.192;HRun=0;HaplotypeScore=216.0314;InbreedingCoeff=0.9427;MQ=47.56;MQ0=29;MQRankSum=-4.488;QD=17.67;ReadPosRankSum=-2.952;VQSLOD=1.5604;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,116,2899	0/0:18,0:18:42.02:0,42,849	0/0:42,0:9:5.91:0,6,115	0/0:51,0:13:10.53:0,11,123	0/0:20,0:20:35.34:0,35,687	0/0:25,0:25:27.09:0,27,760	0/0:26,0:26:36.12:0,36,858	1/1:24,1:21:20.97:288,21,0	1/1:18,17:33:48:826,48,0	0/0:53,0:49:89.93:0,90,2057	0/0:25,0:26:47.77:0,48,1248	0/0:34,0:33:39.13:0,39,1114	0/0:29,0:31:58.96:0,59,1755	0/0:28,0:28:30.10:0,30,839	0/0:44,0:42:72.24:0,72,2071	0/0:46,0:46:75.21:0,75,2121	0/0:33,0:32:68.45:0,68,1924	0/0:27,0:26:66.12:0,66,1832	0/0:21,0:16:30.10:0,30,819	0/0:37,0:37:54.58:0,55,1106	1/1:38,2:38:17.63:298,18,0	0/0:38,0:39:60.16:0,60,1386	0/0:26,0:24:30.09:0,30,635	0/0:46,0:45:48.06:0,48,1480	0/0:20,0:24:33.52:0,34,624	1/1:24,11:31:65.64:1157,66,0	0/0:16,0:18:54.18:0,54,1285	1/1:5,0:5:7.26:74,7,0
chr10	88412068	.	AGTGT	A	1509.60	PASS	AB=0.603;AC=11;AF=0.196;AN=56;BaseQRankSum=3.651;DP=735;FS=42.034;HRun=0;HaplotypeScore=184.6431;InbreedingCoeff=0.4976;MQ=45.35;MQ0=22;MQRankSum=-0.173;QD=10.41;ReadPosRankSum=-0.589;VQSLOD=1.3500;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,141,3586	0/0:14,0:14:42.14:0,42,1061	0/0:43,0:11:20.29:0,20,377	0/0:51,0:13:16.12:0,16,395	0/0:15,0:15:5.31:0,5,154	0/1:2,11:12:16.03:100,0,16	1/1:11,17:24:11.14:217,11,0	0/0:60,0:38:99:0,99,2112	0/0:26,0:23:27.47:0,27,685	0/0:40,0:40:99:0,108,2745	0/0:17,0:17:45.14:0,45,1094	1/1:5,17:20:21:336,21,0	0/0:19,0:18:17.81:0,18,339	0/1:6,16:20:14.32:201,0,14	1/1:8,15:20:2.90:54,3,0	0/0:34,0:34:24.25:0,24,895	0/0:26,0:25:72.11:0,72,1710	0/1:6,5:11:31.55:397,0,32	0/0:13,0:10:27.09:0,27,642	0/0:21,0:20:14.52:0,15,271	0/0:37,0:35:10.30:0,10,312	1/1:9,17:25:2.69:357,3,0	0/0:17,0:16:5.95:0,6,96	0/0:41,0:40:23.74:0,24,542	0/0:13,0:13:11.97:0,12,253	0/0:22,0:19:51.04:0,51,1144	0/0:15,0:14:18.28:0,18,719	0/0:6,0:5:12.03:0,12,222
chr10	88412077	.	GTA	G	144.54	PASS	AB=0.978;AC=11;AF=0.196;AN=56;BaseQRankSum=5.899;DP=723;FS=35.285;HRun=0;HaplotypeScore=184.0289;InbreedingCoeff=0.4952;MQ=44.92;MQ0=20;MQRankSum=-0.916;QD=0.97;ReadPosRankSum=-1.195;VQSLOD=1.2040;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:60,1:61:99:0,150,2673	0/0:15,0:15:45.12:0,45,726	0/0:41,0:9:8.05:0,8,206	0/0:45,1:12:17.34:0,17,319	0/0:15,0:15:5.96:0,6,59	0/1:17,0:16:18.56:25,0,19	0/1:27,2:23:2.76:7,0,3	0/0:50,1:30:70.33:0,70,1125	0/0:22,0:19:27.09:0,27,491	0/0:37,0:37:99:0,108,2006	0/0:16,0:16:47.85:0,48,773	1/1:22,0:20:4.83:28,5,0	0/0:20,0:19:25.25:0,25,262	1/1:22,0:21:0.98:59,1,0	1/1:24,0:22:2.03:6,2,0	0/0:35,0:35:44.78:0,45,616	0/0:25,0:24:69.08:0,69,1220	0/1:11,0:11:45.65:46,0,54	0/0:13,0:10:30.02:0,30,428	0/0:19,0:18:17.26:0,17,205	0/0:35,0:35:12.04:0,12,231	1/1:23,0:22:16.73:115,17,0	0/0:18,0:17:8.47:0,8,46	0/0:41,1:41:17.84:0,18,306	0/0:14,0:14:14.52:0,15,163	0/0:24,0:21:53.28:0,53,798	0/0:16,0:15:31.46:0,31,500	0/0:6,0:5:8.43:0,8,152
chr10	88412088	.	A	AGT	1775.15	PASS	AB=0.991;AC=38;AF=0.679;AN=56;BaseQRankSum=10.778;DP=703;FS=7.411;HRun=0;HaplotypeScore=186.3730;InbreedingCoeff=0.6515;MQ=41.20;MQ0=17;MQRankSum=-8.488;QD=3.71;ReadPosRankSum=-6.241;VQSLOD=-0.0622;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:91.54:0,92,1299	0/0:14,0:14:33.11:0,33,419	0/0:38,0:4:11.97:0,12,125	0/0:35,0:4:8.73:0,9,71	1/1:14,1:16:2.18:6,2,0	1/1:17,1:17:11.15:86,11,0	1/1:24,2:20:1.84:12,2,0	0/1:49,0:27:79.37:79,0,226	1/1:25,0:22:24.32:247,24,0	0/0:39,0:38:96.20:0,96,1158	0/0:16,0:16:45.12:0,45,542	1/1:19,1:18:8.63:46,9,0	1/1:19,0:18:26.50:216,27,0	1/1:23,2:23:14.31:122,14,0	0/1:25,1:24:0.06:0,0,0	1/1:35,0:35:7.36:82,7,0	0/0:24,0:24:35.40:0,35,599	1/1:10,0:10:19.22:142,19,0	1/1:13,0:9:12.22:184,12,0	1/1:22,0:22:7.73:24,8,0	1/1:39,0:38:2.07:8,2,0	1/1:19,3:21:9.01:113,9,0	1/1:19,0:18:8.26:35,8,0	0/1:36,0:36:0.05:0,0,0	1/1:19,0:19:12.22:36,12,0	0/1:18,0:16:0.01:294,0,0	1/1:15,0:14:13.37:126,13,0	1/1:6,0:5:9.02:99,9,0
chr10	88412094	.	TGTGTGAGA	T	1294	PASS	AB=0.956;AC=19;AF=0.339;AN=56;BaseQRankSum=5.170;DP=709;FS=11.756;HRun=0;HaplotypeScore=215.4729;InbreedingCoeff=0.2457;MQ=40.16;MQ0=17;MQRankSum=-3.246;QD=4.96;ReadPosRankSum=0.520;VQSLOD=1.7323;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,120,4476	0/0:12,0:12:33.11:0,33,1375	0/0:39,0:5:11.71:0,12,250	0/0:40,0:5:15.05:0,15,342	0/0:19,0:19:0.14:0,0,14	1/1:10,7:16:11.71:230,12,0	1/1:19,5:18:3.23:66,3,0	0/0:45,2:26:26.25:0,26,652	0/1:26,0:24:99:111,0,278	0/0:43,0:42:99:0,113,4103	0/0:16,0:16:48.16:0,48,1893	1/1:11,8:17:1.79:130,2,0	0/1:21,0:20:79.87:80,0,298	1/1:12,12:22:11.59:202,12,0	1/1:6,18:22:3.01:34,3,0	0/1:37,0:37:8.51:9,0,222	0/0:23,0:23:24.21:0,24,2274	0/1:5,4:9:18.48:459,0,18	0/0:13,0:9:21.38:0,21,419	0/0:24,0:23:11.48:0,11,71	0/0:36,0:35:7.42:0,7,58	1/1:9,10:18:5.91:46,6,0	0/0:21,0:20:12.85:0,13,167	0/0:36,1:37:4.28:0,4,37	0/0:21,0:21:17.65:0,18,107	0/1:20,0:19:40.23:40,0,705	0/1:14,0:13:30.57:31,0,383	0/1:6,0:5:26.66:27,0,222
chr10	88412098	.	T	TGTGAGA	6944.81	PASS	AB=0.676;AC=30;AF=0.556;AN=54;BaseQRankSum=-0.534;DP=714;FS=10.298;HRun=0;HaplotypeScore=191.1965;InbreedingCoeff=0.4402;MQ=40.46;MQ0=15;MQRankSum=-7.185;QD=17.15;ReadPosRankSum=-3.586;VQSLOD=2.5611;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,120,2697	0/0:11,0:11:33.11:0,33,811	0/0:37,0:5:12.44:0,12,237	0/0:45,0:6:18.01:0,18,260	0/0:2,15:18:0.63:0,1,2	1/1:11,5:15:14.79:324,15,0	1/1:15,6:17:2.68:45,3,0	0/1:45,0:25:40.01:536,0,40	1/1:15,7:23:29.53:719,30,0	0/0:42,0:41:99:0,115,2546	0/0:17,0:17:48.16:0,48,1146	1/1:16,4:18:11.62:129,12,0	1/1:0,17:22:22.10:743,22,0	1/1:22,3:23:17.69:283,18,0	1/1:22,2:22:2.84:14,3,0	0/1:3,29:34:9.66:333,0,10	0/0:24,0:24:53.42:0,53,1374	0/1:7,1:8:20.41:438,0,20	0/1:4,8:11:8.01:899,0,8	0/1:2,23:27:0:0,0,0	0/0:6,24:38:1.38:0,1,26	1/1:19,1:19:8.88:113,9,0	1/1:0,14:20:6.02:121,6,0	1/1:16,18:35:2.85:50,3,0	./.	0/1:2,14:19:19.62:1312,0,20	1/1:1,9:13:18.06:563,18,0	1/1:1,4:8:12.04:325,12,0
chr10	88412102	.	AGTGTGTGT	A	1353.77	PASS	AB=0.985;AC=17;AF=0.304;AN=56;BaseQRankSum=5.977;DP=723;FS=5.759;HRun=0;HaplotypeScore=219.8981;InbreedingCoeff=0.2579;MQ=39.91;MQ0=14;MQRankSum=-4.391;QD=5.91;ReadPosRankSum=-0.391;VQSLOD=1.7424;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,114,4591	0/0:12,0:12:36.12:0,36,1470	0/0:40,0:8:18.06:0,18,308	0/0:51,0:6:18.03:0,18,486	0/0:18,0:18:3.28:0,3,73	1/1:14,1:13:12.04:234,12,0	1/1:23,1:18:3.89:82,4,0	0/0:42,0:24:60.93:0,61,1058	0/1:25,1:23:84.07:84,0,403	0/0:43,0:41:99:0,119,4353	0/0:18,0:18:54.19:0,54,2048	1/1:19,2:19:5.82:136,6,0	0/1:20,0:19:79.19:79,0,341	0/1:24,2:24:14.99:275,0,15	1/1:25,1:25:3.01:47,3,0	0/0:36,0:36:37.83:0,38,579	0/0:23,0:24:65.35:0,65,2621	0/1:8,0:8:37.33:459,0,37	0/0:14,0:12:34.36:0,34,682	0/0:28,0:27:13.71:0,14,124	0/0:38,0:36:13.49:0,13,219	1/1:20,1:20:5.90:43,6,0	0/0:19,0:18:12.85:0,13,178	0/0:37,0:37:9.75:0,10,186	0/0:25,0:24:23.67:0,24,240	0/1:22,0:22:25.01:25,0,1131	0/1:12,0:11:30.42:30,0,477	0/1:8,0:8:26.60:27,0,236
chr10	88412124	.	T	TGA	975.55	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=9.855;DP=783;FS=17.608;HRun=0;HaplotypeScore=198.0586;InbreedingCoeff=0.7821;MQ=46.63;MQ0=17;MQRankSum=-6.085;QD=4.98;ReadPosRankSum=-4.392;VQSLOD=0.4807;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,105,1362	0/0:15,0:15:39.08:0,39,498	0/0:47,0:10:20.43:0,20,301	0/0:53,0:7:16.43:0,16,193	0/0:20,0:18:8.22:0,8,145	1/1:9,8:16:24.05:330,24,0	1/1:11,17:25:11.56:188,12,0	0/0:34,0:29:78.08:0,78,973	0/0:31,0:29:47.93:0,48,557	0/0:32,0:30:68.41:0,68,883	0/0:22,0:22:63.13:0,63,833	1/1:4,22:26:6.01:78,6,0	0/0:17,0:17:12.98:0,13,206	1/1:9,20:27:8.78:137,9,0	1/1:4,34:37:3.01:51,3,0	0/0:34,0:34:30.05:0,30,494	0/0:23,0:23:50.95:0,51,857	1/1:2,7:9:6.21:339,6,0	0/0:25,0:18:49.23:0,49,534	0/0:34,0:34:11.15:0,11,307	0/0:41,0:39:15.54:0,16,307	1/1:2,19:21:2.96:20,3,0	0/0:24,0:23:10.02:0,10,204	0/0:32,0:32:22.80:0,23,298	0/1:27,0:26:1.91:2,0,181	0/0:23,0:23:66.10:0,66,865	0/0:17,0:16:36.04:0,36,403	0/0:15,0:15:30.04:0,30,378
chr10	88412216	.	TTGTGTGTGTGTGTGTG	T	6117.34	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=8.122;DP=749;FS=28.038;HRun=0;HaplotypeScore=278.0693;InbreedingCoeff=0.8591;MQ=51.22;MQ0=17;MQRankSum=-8.199;QD=38.72;ReadPosRankSum=3.903;VQSLOD=2.3096;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:51:81.23:0,81,5088	0/0:9,0:11:15.05:0,15,842	0/0:23,0:7:6.02:0,6,287	0/0:36,0:8:8.06:0,8,171	0/0:23,0:21:33.58:0,34,2055	1/1:6,9:16:21.07:787,21,0	1/1:15,10:22:21.07:802,21,0	0/0:36,0:26:42.14:0,42,1907	0/0:14,0:23:42.14:0,42,1421	0/0:35,0:34:57.18:0,57,3173	0/0:16,0:17:34.86:0,35,1826	1/1:18,6:23:18.06:774,18,0	0/0:23,0:25:45.63:0,46,2704	1/1:18,9:28:33.09:1140,33,0	1/1:19,11:28:36.11:1445,36,0	0/0:27,0:28:42.62:0,43,3025	0/0:29,0:31:75.26:0,75,4886	0/1:13,0:13:99:159,0,293	0/0:21,0:21:30.10:0,30,1307	0/0:29,0:28:42.59:0,43,2308	0/0:23,0:40:42.13:0,42,2344	1/1:14,7:20:27.09:1009,27,0	0/0:28,0:28:36.06:0,36,2229	0/0:44,0:44:84.29:0,84,5874	0/0:18,0:17:27.08:0,27,1514	0/0:25,0:24:60.21:0,60,3889	0/0:27,0:27:57.18:0,57,3284	0/0:12,0:13:15.05:0,15,960
chr10	88414172	.	GGTGTTTA	G	10225.81	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=16.067;DP=733;FS=0.000;HRun=0;HaplotypeScore=175.4653;InbreedingCoeff=0.9982;MQ=92.36;MQ0=0;MQRankSum=-17.609;QD=55.27;ReadPosRankSum=1.996;VQSLOD=4.6618;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,3690	0/0:6,0:6:18.06:0,18,703	0/0:44,0:44:99:0,114,3911	0/0:32,0:32:61.68:0,62,2453	0/0:25,0:25:72.24:0,72,2656	1/1:2,25:27:72.18:1782,72,0	1/1:7,23:30:54.19:1382,54,0	0/0:24,0:24:66.21:0,66,2413	0/0:33,0:33:96.33:0,96,3799	0/0:22,0:22:66.23:0,66,2515	0/0:14,0:14:42.13:0,42,1523	1/1:2,33:35:87.30:2207,87,0	0/0:21,0:21:60.21:0,60,2302	1/1:2,28:30:69.24:1765,69,0	1/1:0,19:19:48.10:1126,48,0	0/0:32,0:32:93.32:0,93,3551	0/0:31,0:31:84.28:0,84,3104	1/1:3,13:16:27.09:653,27,0	0/0:27,0:27:78.25:0,78,2778	0/0:30,0:30:90.24:0,90,3318	0/0:32,0:32:96.24:0,96,3638	1/1:3,25:28:60.01:1312,60,0	0/0:22,0:22:63.21:0,63,2343	0/0:33,0:33:93.32:0,93,3685	0/0:22,0:22:63.22:0,63,2455	0/0:22,0:22:66.23:0,66,2552	0/0:29,0:29:78.27:0,78,3092	0/0:14,0:14:27.09:0,27,1023
chr10	88415810	.	A	AT	4305.53	PASS	AB=0.905;AC=17;AF=0.304;AN=56;BaseQRankSum=-12.047;DP=571;FS=3.775;HRun=10;HaplotypeScore=57.4676;InbreedingCoeff=0.9100;MQ=68.73;MQ0=0;MQRankSum=-1.051;QD=20.90;ReadPosRankSum=0.710;VQSLOD=5.8736;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:38.93:0,39,320	0/0:13,0:13:29.95:0,30,246	0/0:8,0:9:16.92:0,17,119	0/0:9,0:9:15.50:0,15,92	0/0:19,0:19:44.94:0,45,369	1/1:6,20:26:23.53:455,24,0	1/1:5,32:37:49.96:943,50,0	0/0:25,0:25:50.59:0,51,418	1/1:3,14:19:50.82:502,51,0	0/0:20,0:20:50.93:0,51,419	0/0:25,0:27:67.93:0,68,544	1/1:2,16:18:33.08:352,33,0	0/0:16,0:17:34.97:0,35,277	1/1:6,9:16:32.91:328,33,0	1/1:3,19:22:26.60:480,27,0	0/1:17,2:19:10.05:10,0,337	0/0:13,0:13:38.96:0,39,320	1/1:5,25:30:66.17:704,66,0	0/0:23,0:23:56.90:0,57,465	0/0:24,0:26:21.23:0,21,368	0/0:18,1:19:9.95:0,10,288	1/1:1,18:19:51.09:532,51,0	0/0:25,0:25:65.90:0,66,541	0/0:19,0:19:47.89:0,48,388	0/0:26,0:26:65.19:0,65,540	0/0:20,0:20:38.89:0,39,320	0/0:26,0:26:68.90:0,69,566	0/0:10,0:10:29.97:0,30,246
chr10	88418273	.	TG	T	7826.60	PASS	AB=0.585;AC=36;AF=0.643;AN=56;BaseQRankSum=16.800;DP=613;FS=8.906;HRun=1;HaplotypeScore=124.9781;InbreedingCoeff=0.7104;MQ=66.86;MQ0=0;MQRankSum=-4.253;QD=17.28;ReadPosRankSum=5.981;VQSLOD=4.6137;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1603	0/0:7,0:7:21.07:0,21,336	0/0:15,0:15:45.15:0,45,691	0/0:11,0:11:24.08:0,24,362	0/1:7,16:30:4.41:310,0,4	1/1:2,22:24:41.87:424,42,0	0/1:7,12:19:15.45:226,0,15	0/1:4,11:23:8.84:321,0,9	1/1:3,19:22:63.80:725,64,0	0/0:19,0:19:57.19:0,57,842	0/0:20,0:20:60.20:0,60,938	1/1:4,29:34:78.58:686,79,0	1/1:7,24:32:72.38:636,72,0	1/1:3,17:26:28:368,28,0	1/1:5,15:27:31.41:382,31,0	1/1:6,18:24:11.03:370,11,0	0/0:22,0:22:60.18:0,60,932	1/1:3,17:20:17.87:349,18,0	0/1:9,13:24:25.40:302,0,25	1/1:2,12:14:35.33:277,35,0	1/1:5,12:17:44.89:360,45,0	1/1:6,16:27:39.24:423,39,0	1/1:5,13:18:41.79:324,42,0	1/1:2,13:15:31.73:244,32,0	0/0:31,0:31:90.31:0,90,1413	1/1:3,18:22:26.14:411,26,0	1/1:5,16:22:36.44:422,36,0	1/1:0,13:13:38.55:266,39,0
chr10	88418275	.	TG	T	8731.02	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=16.675;DP=620;FS=9.667;HRun=1;HaplotypeScore=123.9279;InbreedingCoeff=0.9981;MQ=66.75;MQ0=0;MQRankSum=-3.154;QD=18.98;ReadPosRankSum=4.446;VQSLOD=4.4351;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,100,1258	0/0:7,0:7:21.07:0,21,293	0/0:15,0:15:38.25:0,38,495	0/0:11,0:11:23.99:0,24,250	1/1:16,14:30:48.32:441,48,0	1/1:8,17:25:58.55:484,59,0	1/1:7,11:18:21.99:256,22,0	1/1:12,11:23:26.77:352,27,0	1/1:19,3:22:64.16:731,64,0	0/0:18,0:18:51.06:0,51,620	0/0:20,0:20:60.16:0,60,786	1/1:7,28:35:97.49:767,97,0	1/1:9,24:33:86.96:689,87,0	1/1:9,17:26:45.17:393,45,0	1/1:12,15:27:49.73:418,50,0	1/1:8,18:26:53.44:476,53,0	0/0:21,0:21:60.14:0,60,781	1/1:4,16:20:44.48:387,44,0	1/1:12,12:24:31.10:383,31,0	1/1:4,11:15:38.51:305,39,0	1/1:6,12:18:39.35:354,39,0	1/1:11,16:27:57.59:461,58,0	1/1:5,13:18:50.72:390,51,0	1/1:2,13:15:32.92:265,33,0	0/0:32,0:32:93.27:0,93,1245	1/1:5,17:22:45.25:435,45,0	1/1:7,16:23:55.69:475,56,0	1/1:0,13:13:38.55:269,39,0
chr10	88422279	.	G	GA	270.62	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.621;DP=325;FS=1.300;HRun=9;HaplotypeScore=37.1364;InbreedingCoeff=0.7136;MQ=83.04;MQ0=0;MQRankSum=-0.223;QD=22.55;ReadPosRankSum=-0.400;VQSLOD=3.6830;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:56.99:0,57,495	0/0:10,0:10:26.99:0,27,234	0/0:14,0:14:22.89:0,23,175	0/0:11,0:10:6.41:0,6,118	0/0:19,0:19:44.93:0,45,382	0/0:11,0:11:32.80:0,33,266	0/0:3,0:3:9:0,9,78	0/0:30,0:30:71.94:0,72,620	1/1:0,12:12:33.09:365,33,0	0/0:10,0:10:23.99:0,24,208	0/0:24,0:24:59.98:0,60,521	0/0:3,0:3:9:0,9,78	0/0:11,0:11:32.98:0,33,282	0/0:7,0:7:21:0,21,182	0/0:7,0:7:21:0,21,182	0/0:10,0:10:26.96:0,27,228	0/0:15,0:15:5.92:0,6,279	0/0:19,0:19:38.98:0,39,339	0/0:10,0:10:29.99:0,30,260	0/0:8,0:8:20.99:0,21,182	0/0:6,0:6:17.99:0,18,153	0/0:6,0:6:15:0,15,130	0/0:6,0:7:20.03:0,20,162	0/0:6,0:6:15:0,15,130	0/0:14,0:14:41.98:0,42,360	0/0:12,0:12:35.99:0,36,313	0/0:8,0:8:20.90:0,21,173	0/0:11,0:11:32.99:0,33,286
chr10	88422601	.	C	CAA	6809.98	PASS	AB=0.667;AC=37;AF=0.661;AN=56;BaseQRankSum=-0.441;DP=641;FS=1.765;HRun=12;HaplotypeScore=98.5163;InbreedingCoeff=0.6103;MQ=70.11;MQ0=1;MQRankSum=-1.725;QD=13.95;ReadPosRankSum=-2.433;VQSLOD=3.4728;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:30:47.12:0,47,454	0/0:7,0:7:18.01:0,18,167	0/0:11,0:12:5.82:0,6,57	0/1:11,0:11:20.77:21,0,28	0/1:12,1:40:18.12:227,0,18	1/1:6,0:20:5.18:76,5,0	0/1:2,1:19:3.82:125,0,4	1/1:9,23:36:74.19:933,74,0	0/0:0,0:23:52.15:0,52,225	0/0:23,0:26:63.65:0,64,567	0/0:21,0:25:32.25:0,32,429	1/1:5,0:22:24.83:86,25,0	1/1:7,16:24:26.83:374,27,0	1/1:7,1:25:13.51:150,14,0	1/1:3,0:16:22.33:78,22,0	1/1:8,19:30:43.80:528,44,0	0/0:27,0:29:62.54:0,63,614	1/1:2,1:17:30.64:140,31,0	1/1:9,15:26:31.81:661,32,0	1/1:7,17:25:55.78:649,56,0	1/1:8,13:24:32.59:406,33,0	1/1:5,0:19:25.72:88,26,0	1/1:5,15:21:30.42:345,30,0	1/1:6,13:21:13.28:416,13,0	1/1:6,0:24:36.06:372,36,0	0/1:16,12:31:3.81:468,0,4	1/1:2,19:23:21.49:515,21,0	0/1:2,5:12:7.73:152,0,8
chr10	88422747	.	A	AAG	743.18	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.205;DP=585;FS=0.000;HRun=0;HaplotypeScore=75.0470;InbreedingCoeff=0.9799;MQ=87.63;MQ0=0;MQRankSum=-1.926;QD=39.11;ReadPosRankSum=0.454;VQSLOD=5.1619;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,114,1470	0/0:8,0:8:24.07:0,24,308	0/0:24,0:24:15.60:0,16,613	0/0:19,0:19:24.38:0,24,394	0/0:22,0:22:63.21:0,63,851	0/0:20,0:20:57.19:0,57,770	0/0:14,0:14:38.93:0,39,528	0/0:38,0:38:99:0,105,1359	1/1:2,16:19:48.16:838,48,0	0/0:12,0:12:36.12:0,36,487	0/0:17,0:17:42.13:0,42,552	0/0:20,0:20:51.17:0,51,683	0/0:23,0:23:63.21:0,63,852	0/0:17,0:17:48.16:0,48,649	0/0:16,0:16:42.14:0,42,568	0/0:23,0:23:66.21:0,66,877	0/0:27,0:27:69.23:0,69,932	0/0:18,0:18:48.16:0,48,649	0/0:21,0:21:63.20:0,63,836	0/0:20,0:20:54.18:0,54,731	0/0:40,0:40:99:0,102,1359	0/0:20,0:20:51.17:0,51,690	0/0:19,0:19:39.12:0,39,509	0/0:19,0:19:54.18:0,54,731	0/0:12,0:12:33.09:0,33,429	0/0:26,0:26:75.21:0,75,946	0/0:18,0:18:51.17:0,51,688	0/0:10,0:10:24.06:0,24,308
chr10	88422940	.	A	AC	548.22	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=6.422;DP=575;FS=14.905;HRun=6;HaplotypeScore=60.1691;InbreedingCoeff=0.7109;MQ=73.73;MQ0=0;MQRankSum=-0.091;QD=12.75;ReadPosRankSum=-0.889;VQSLOD=1.1503;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:49.35:0,49,492	0/0:11,0:11:33.07:0,33,336	0/1:19,0:19:4.57:5,0,282	0/0:18,0:16:36.08:0,36,367	0/0:24,0:24:63.14:0,63,642	0/0:21,0:21:51.11:0,51,520	0/0:27,0:27:78.16:0,78,789	0/0:26,0:26:66.13:0,66,660	1/1:2,20:22:51.63:642,52,0	0/0:22,0:22:60.13:0,60,607	0/0:21,0:21:54.12:0,54,550	0/0:19,0:19:51.11:0,51,516	0/0:23,0:23:60.06:0,60,590	0/0:14,0:14:36.08:0,36,367	0/0:23,0:23:57.11:0,57,574	0/0:17,0:17:42.09:0,42,429	0/0:23,0:23:60.13:0,60,612	0/0:18,0:18:54.12:0,54,550	0/0:17,0:17:45.10:0,45,459	0/0:29,0:29:78.17:0,78,793	0/0:19,0:19:48.09:0,48,483	0/0:19,0:19:48.10:0,48,488	0/0:38,0:38:99:0,105,1070	0/0:14,0:14:42.06:0,42,417	0/0:16,0:16:42.09:0,42,428	0/0:23,0:23:60.12:0,60,607	0/0:22,0:22:51.11:0,51,520	0/0:6,0:6:18:0,18,173
chr10	88423373	.	CCT	C	656.06	PASS	AB=1.000;AC=13;AF=0.295;AN=44;BaseQRankSum=1.186;DP=285;FS=17.811;HRun=0;HaplotypeScore=54.2319;InbreedingCoeff=0.6772;MQ=49.69;MQ0=60;MQRankSum=0.349;QD=9.11;ReadPosRankSum=1.079;VQSLOD=1.6754;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:12:14.35:0,14,235	./.	0/0:9,0:4:9.03:0,9,129	0/0:19,0:5:7.70:0,8,80	1/1:3,1:3:3.01:36,3,0	1/1:4,4:7:12.03:133,12,0	1/1:24,0:18:17.94:189,18,0	0/0:17,0:16:7.79:0,8,81	0/1:14,0:13:0.16:6,0,0	0/0:11,0:7:18.02:0,18,231	./.	1/1:1,6:7:15.03:168,15,0	0/0:2,0:1:2.68:0,3,11	1/1:3,0:2:3.01:34,3,0	./.	0/0:5,0:3:2.60:0,3,10	0/0:12,0:11:30.10:0,30,436	1/1:4,8:8:21.06:241,21,0	0/0:13,0:7:13.72:0,14,79	0/0:10,0:8:5.69:0,6,41	0/0:16,0:22:17.30:0,17,243	./.	./.	0/0:7,0:5:11.06:0,11,76	0/0:20,0:15:30.57:0,31,474	0/0:18,0:17:21.79:0,22,226	./.	0/0:12,0:4:0.57:0,1,82
chr10	88423375	.	T	TCC	1179.22	PASS	AB=1.000;AC=25;AF=0.500;AN=50;BaseQRankSum=1.896;DP=272;FS=4.648;HRun=3;HaplotypeScore=57.4147;InbreedingCoeff=0.2791;MQ=51.32;MQ0=53;MQRankSum=-3.022;QD=7.32;ReadPosRankSum=-2.496;VQSLOD=-0.6603;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:12:24.26:24,0,174	1/1:2,0:1:2.97:20,3,0	0/0:10,0:5:9.02:0,9,125	0/0:19,0:5:3.35:0,3,74	1/1:3,0:2:3.01:36,3,0	1/1:8,0:7:17.89:219,18,0	1/1:6,17:19:18.06:305,18,0	0/1:13,0:12:30.73:62,0,31	0/0:13,0:12:6.54:0,7,57	0/0:11,0:7:17.75:0,18,189	./.	1/1:6,0:6:15.05:222,15,0	0/0:3,0:2:2.58:0,3,10	1/1:1,3:3:3.01:53,3,0	1/1:5,0:1:1.25:3,1,0	0/1:5,0:3:1.23:27,0,1	0/0:11,0:10:16.06:0,16,393	1/1:11,0:8:21.07:310,21,0	0/1:11,0:6:2.45:2,0,43	0/1:8,0:6:9.65:10,0,13	0/1:24,0:22:3.12:3,0,150	./.	./.	0/0:7,0:5:10.96:0,11,61	0/0:18,0:15:21.51:0,22,365	0/1:17,0:16:21.16:21,0,100	1/1:4,0:1:2.96:19,3,0	0/0:11,0:4:0.58:0,1,62
chr10	88427491	.	GGAGAGA	G	90.14	PASS	AB=0.965;AC=15;AF=0.313;AN=48;BaseQRankSum=3.444;DP=526;FS=28.790;HRun=0;HaplotypeScore=115.8843;InbreedingCoeff=0.2635;MQ=57.20;MQ0=20;MQRankSum=-0.739;QD=0.56;ReadPosRankSum=-1.307;VQSLOD=0.6102;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:15.52:0,16,258	./.	./.	0/0:58,0:17:0:0,0,0	0/0:24,0:24:9.03:0,9,114	0/1:19,0:18:8.82:9,0,36	1/1:18,0:16:0.78:2,1,0	./.	0/0:17,0:17:12.03:0,12,197	0/0:21,0:21:9.01:0,9,93	1/1:12,0:12:3.01:36,3,0	0/0:9,0:9:9.02:0,9,113	0/0:16,0:17:3.90:0,4,38	0/0:12,0:11:3.01:0,3,48	0/0:11,0:11:0:0,0,0	1/1:14,0:13:3:45,3,0	0/1:15,2:17:38.73:39,0,185	0/0:16,0:16:9.02:0,9,117	0/0:9,0:9:2.50:0,2,9	1/1:23,0:22:0.89:2,1,0	1/1:18,0:18:1.14:3,1,0	0/0:23,0:23:6.02:0,6,96	./.	1/1:18,4:21:3.01:60,3,0	0/0:13,0:13:2.92:0,3,17	0/0:17,0:16:8.28:0,8,63	0/1:17,0:16:12.24:12,0,32	0/0:10,0:9:0.47:0,0,1
chr10	88429058	.	AG	A	6444.43	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.592;DP=685;FS=5.492;HRun=2;HaplotypeScore=69.3759;InbreedingCoeff=0.9999;MQ=87.33;MQ0=0;MQRankSum=-1.574;QD=35.60;ReadPosRankSum=1.028;VQSLOD=5.3256;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,1689	0/0:10,0:10:30.10:0,30,450	0/0:24,0:24:63.21:0,63,914	0/0:27,0:27:72.24:0,72,1040	0/0:27,0:27:81.27:0,81,1214	0/0:21,0:21:63.21:0,63,944	0/0:21,0:21:63.20:0,63,924	0/0:23,0:23:63.21:0,63,942	0/0:22,0:22:66.22:0,66,988	0/0:28,0:28:84.28:0,84,1240	0/0:18,0:18:54.18:0,54,807	0/0:23,0:23:69.22:0,69,1000	1/1:2,29:31:75.24:965,75,0	0/0:19,0:19:57.19:0,57,851	0/0:34,0:34:99:0,99,1466	1/1:0,28:28:78.25:1013,78,0	0/0:25,0:25:72.24:0,72,1079	0/0:28,0:28:81.27:0,81,1213	1/1:0,23:23:69.21:883,69,0	1/1:1,27:28:81.26:1052,81,0	0/0:26,0:26:78.25:0,78,1148	0/0:20,0:20:60.19:0,60,880	1/1:0,22:22:63.20:818,63,0	1/1:0,23:23:66.21:857,66,0	0/0:19,0:19:57.19:0,57,854	0/0:32,0:32:96.32:0,96,1431	1/1:0,26:26:66.21:857,66,0	0/0:16,0:16:48.16:0,48,719
chr10	88429497	.	CT	C	1694.68	PASS	AB=0.913;AC=9;AF=0.161;AN=56;BaseQRankSum=7.249;DP=672;FS=30.419;HRun=10;HaplotypeScore=68.1637;InbreedingCoeff=0.8547;MQ=70.38;MQ0=3;MQRankSum=-1.411;QD=14.36;ReadPosRankSum=-0.816;VQSLOD=1.5991;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,169,1795	0/0:10,0:10:27.06:0,27,291	0/1:19,2:13:16.21:16,0,107	0/0:17,0:11:10.81:0,11,68	0/0:20,0:20:43.04:0,43,579	0/0:17,0:17:44.71:0,45,475	0/0:30,0:30:75.20:0,75,830	1/1:4,26:30:68.12:573,68,0	0/0:23,0:23:54.13:0,54,587	0/0:28,0:28:78.19:0,78,843	0/0:15,0:15:42:0,42,440	0/0:28,0:28:80.58:0,81,871	0/0:18,0:18:47.95:0,48,505	0/0:26,0:26:69.19:0,69,763	0/0:26,0:26:57.15:0,57,631	0/0:14,1:15:19.07:0,19,439	0/0:39,0:39:99:0,114,1249	0/0:22,0:23:62.92:0,63,651	0/0:28,0:28:81.17:0,81,859	0/0:20,0:20:51.03:0,51,517	1/1:1,29:30:71.97:625,72,0	0/0:16,0:16:38.13:0,38,397	0/0:14,0:14:36.09:0,36,392	0/0:37,0:37:99:0,102,1114	0/0:17,0:17:48.13:0,48,529	1/1:5,15:20:14.79:357,15,0	0/0:26,0:27:66.14:0,66,715	1/1:2,15:17:32.99:286,33,0
chr10	88430448	.	G	GTA	4135.38	PASS	AB=0.824;AC=36;AF=0.720;AN=50;BaseQRankSum=-3.107;DP=526;FS=5.992;HRun=0;HaplotypeScore=102.0331;InbreedingCoeff=0.6871;MQ=60.18;MQ0=8;MQRankSum=-1.846;QD=12.46;ReadPosRankSum=0.980;VQSLOD=3.0593;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,132,1567	0/0:9,0:9:24.03:0,24,296	./.	0/1:8,0:5:0.03:0,0,0	./.	1/1:4,1:23:8.61:64,9,0	1/1:10,1:32:3.68:24,4,0	1/1:7,0:16:11.24:272,11,0	0/0:11,0:11:27.14:0,27,254	0/0:27,0:25:63.29:0,63,754	0/0:19,0:18:45.14:0,45,651	0/1:10,0:21:0:0,0,0	1/1:2,11:13:0.63:159,1,0	./.	1/1:2,0:7:3.01:35,3,0	1/1:2,7:9:5.48:222,5,0	0/0:42,0:42:99:0,117,1299	1/1:7,0:16:14.25:101,14,0	1/1:3,19:21:37.90:534,38,0	1/1:4,13:17:2.54:218,3,0	1/1:0,1:16:6.02:72,6,0	1/1:10,0:14:2.74:12,3,0	1/1:1,15:16:23.57:414,24,0	1/1:3,29:32:33.11:636,33,0	1/1:2,0:16:2.86:18,3,0	1/1:4,0:26:65.83:690,66,0	1/1:0,12:12:24.08:461,24,0	1/1:5,1:9:15.05:202,15,0
chr10	88430934	.	GA	G	6354.49	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=12.743;DP=566;FS=4.130;HRun=11;HaplotypeScore=88.8862;InbreedingCoeff=0.9159;MQ=57.03;MQ0=11;MQRankSum=-0.260;QD=14.88;ReadPosRankSum=1.669;VQSLOD=5.4776;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,2:36:65.50:0,65,858	0/0:11,0:10:18.03:0,18,184	0/0:10,0:1:3.01:0,3,32	0/0:17,0:4:5.91:0,6,49	1/1:4,22:26:57.99:455,58,0	1/1:4,13:16:35.96:295,36,0	1/1:2,20:21:17.78:278,18,0	1/1:4,11:15:32.94:271,33,0	1/1:1,0:15:18.33:53,18,0	0/0:14,1:14:5.42:0,5,252	0/0:15,0:15:27.01:0,27,267	1/1:1,15:16:41.95:345,42,0	1/1:2,12:14:29.01:227,29,0	1/1:2,18:21:43.78:351,44,0	1/1:5,16:20:38.93:320,39,0	1/1:4,0:25:32.58:94,33,0	0/0:33,2:35:43.92:0,44,862	1/1:3,18:21:47.92:394,48,0	1/1:6,10:16:26.89:213,27,0	1/1:10,18:28:43.66:350,44,0	1/1:3,15:18:26.70:221,27,0	1/1:7,10:16:23.96:197,24,0	1/1:4,12:16:32.95:270,33,0	1/1:3,30:33:74.62:615,75,0	1/1:4,21:27:28.87:423,29,0	1/1:5,13:18:38.91:317,39,0	1/1:4,26:29:65.46:541,65,0	1/1:0,6:6:14.98:123,15,0
chr10	88431513	.	GGT	G	1892.13	PASS	AB=0.928;AC=30;AF=0.600;AN=50;BaseQRankSum=5.703;DP=673;FS=7.534;HRun=0;HaplotypeScore=103.6446;InbreedingCoeff=0.3232;MQ=58.78;MQ0=17;MQRankSum=2.265;QD=4.33;ReadPosRankSum=2.769;VQSLOD=2.0847;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:37,12:49:11.87:112,12,0	1/1:7,6:13:12.03:130,12,0	./.	./.	0/0:19,0:19:15.05:0,15,204	0/1:17,4:21:11.80:12,0,177	0/1:28,0:29:64.75:65,0,176	0/0:24,0:23:14.96:0,15,138	0/0:22,0:22:14.12:0,14,248	1/1:19,0:19:8.81:72,9,0	0/1:13,1:16:34.49:65,0,34	0/0:26,0:26:24.06:0,24,311	1/1:30,0:30:43.80:409,44,0	0/1:27,0:27:8.96:9,0,299	0/1:23,2:25:34.94:35,0,326	1/1:21,0:21:25.76:228,26,0	1/1:17,4:22:17.38:121,17,0	0/1:20,1:21:16.57:17,0,326	1/1:19,0:18:3.01:33,3,0	1/1:16,0:16:8.46:78,8,0	./.	0/1:28,0:28:0.15:0,0,241	1/1:12,0:12:11.86:111,12,0	1/1:33,0:33:28.97:448,29,0	0/1:11,0:11:15.16:15,0,53	0/0:40,0:40:39.54:0,40,256	1/1:19,0:19:11.86:111,12,0	0/0:9,0:9:11.95:0,12,91
chr10	88431514	.	GT	G	426.43	PASS	AB=0.813;AC=8;AF=0.143;AN=56;BaseQRankSum=8.998;DP=691;FS=4.542;HRun=1;HaplotypeScore=99.8132;InbreedingCoeff=-0.1664;MQ=58.48;MQ0=18;MQRankSum=-0.497;QD=2.60;ReadPosRankSum=-0.950;VQSLOD=-0.7504;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:50:91.75:0,92,1049	0/0:13,0:13:28.33:0,28,276	0/0:34,0:9:27.08:0,27,323	0/0:30,0:12:33.90:0,34,387	0/0:19,0:19:51.16:0,51,673	0/0:21,0:21:38.98:0,39,603	0/0:32,0:32:46.56:0,47,800	0/0:23,0:22:56.42:0,56,286	0/0:22,1:23:42.47:0,42,248	0/0:18,0:18:18.53:0,19,429	0/0:17,0:16:25.80:0,26,333	0/0:27,0:26:66.67:0,67,853	0/1:22,9:31:99:144,0,106	0/0:32,0:32:70.24:0,70,853	0/0:25,0:25:69.85:0,70,907	0/1:15,6:21:52.31:79,0,52	0/0:24,0:22:47.95:0,48,499	0/0:24,0:22:61.03:0,61,784	0/1:18,1:18:19.54:20,0,106	0/1:8,3:15:18.80:19,0,49	0/0:33,0:30:44.51:0,45,221	0/0:30,0:30:50.83:0,51,912	0/1:9,3:12:30.62:31,0,35	0/1:17,15:32:69.93:200,0,70	0/1:13,0:13:22.05:22,0,79	0/0:42,0:42:71.65:0,72,403	0/1:17,4:21:49.18:49,0,112	0/0:9,0:9:25.90:0,26,144
chr10	88431516	.	GT	G	431.04	PASS	AB=0.785;AC=7;AF=0.125;AN=56;BaseQRankSum=9.369;DP=715;FS=2.502;HRun=1;HaplotypeScore=103.9789;InbreedingCoeff=-0.1349;MQ=57.50;MQ0=18;MQRankSum=0.988;QD=2.80;ReadPosRankSum=1.423;VQSLOD=-0.0746;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:51:55.52:0,56,1038	0/0:13,0:13:29.22:0,29,290	0/0:33,0:8:18.01:0,18,207	0/0:30,0:12:28.32:0,28,375	0/0:23,0:23:57.15:0,57,742	0/0:23,0:23:56.19:0,56,717	0/0:35,0:35:52.85:0,53,1026	0/0:23,0:22:57.18:0,57,447	0/0:24,0:25:58.50:0,59,610	0/0:23,0:23:48.43:0,48,499	0/0:17,0:16:31.05:0,31,365	0/0:30,0:29:72.47:0,72,960	0/1:19,11:31:99:155,0,152	0/0:31,0:31:73.83:0,74,987	0/0:24,0:24:70.28:0,70,913	0/1:14,4:20:79.60:94,0,80	0/0:25,0:23:39.72:0,40,452	0/0:26,0:24:61.89:0,62,834	0/1:17,1:17:3.21:3,0,137	0/1:12,2:15:18.25:18,0,63	0/0:35,0:32:48.99:0,49,308	0/0:29,0:29:72.49:0,72,1003	0/1:11,2:14:48.13:56,0,48	0/1:20,13:35:99:214,0,105	0/0:14,0:14:32.02:0,32,265	0/0:41,0:41:99:0,99,847	0/1:12,8:21:15.68:16,0,145	0/0:9,0:9:26.60:0,27,249
chr10	88432074	.	TTAC	T	1872.09	PASS	AB=0.882;AC=25;AF=0.481;AN=52;BaseQRankSum=4.278;DP=309;FS=1.733;HRun=0;HaplotypeScore=57.2702;InbreedingCoeff=0.5552;MQ=57.00;MQ0=1;MQRankSum=-2.790;QD=10.82;ReadPosRankSum=0.301;VQSLOD=3.1351;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:18.06:0,18,312	0/0:4,0:4:6.02:0,6,115	./.	./.	0/1:7,2:10:55.12:55,0,279	0/1:12,1:14:24.52:25,0,410	0/1:5,0:5:0.02:0,0,107	1/1:37,0:37:5.96:46,6,0	0/0:4,0:8:9.03:0,9,118	0/1:5,1:6:21.19:21,0,196	0/0:10,0:10:21.03:0,21,356	0/0:1,0:10:15.05:0,15,214	1/1:2,7:11:14.86:160,15,0	0/0:1,0:7:15.05:0,15,195	0/0:3,0:13:24.08:0,24,369	1/1:1,8:10:30.06:365,30,0	0/0:19,0:19:42.01:0,42,671	0/0:7,0:17:15.05:0,15,196	1/1:4,2:6:6.02:79,6,0	1/1:2,6:7:15:177,15,0	1/1:1,6:7:9.03:119,9,0	0/0:2,0:9:17.44:0,17,168	1/1:1,3:4:9.03:119,9,0	1/1:0,3:4:8.94:79,9,0	1/1:3,0:18:29.71:205,30,0	0/0:9,0:9:18.06:0,18,317	1/1:6,15:23:48.09:584,48,0	0/1:9,1:10:30.11:30,0,106
chr10	88433362	.	TGCGAAC	T	553.31	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.950;DP=699;FS=0.000;HRun=0;HaplotypeScore=172.3540;InbreedingCoeff=0.9987;MQ=86.59;MQ0=0;MQRankSum=-5.136;QD=36.89;ReadPosRankSum=1.151;VQSLOD=3.4914;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,4406	0/0:13,0:13:39.13:0,39,1318	0/0:24,0:24:66.11:0,66,1881	0/0:22,0:22:59.39:0,59,1801	0/0:36,0:36:99:0,108,3109	0/0:25,0:25:72.18:0,72,2002	0/0:30,0:30:87.25:0,87,2357	0/0:21,0:21:63.22:0,63,2191	1/1:2,13:15:27.09:647,27,0	0/0:20,0:20:60.20:0,60,2083	0/0:24,0:24:72.25:0,72,2593	0/0:32,0:32:90.31:0,90,2612	0/0:20,0:20:60.21:0,60,2147	0/0:29,0:29:84.29:0,84,2450	0/0:22,0:22:66.17:0,66,1811	0/0:23,0:23:69.22:0,69,2338	0/0:37,0:37:99:0,108,3743	0/0:20,0:20:54.19:0,54,1541	0/0:20,0:20:57.20:0,57,2005	0/0:28,0:28:84.25:0,84,2816	0/0:50,0:50:99:0,141,4813	0/0:13,0:13:36.11:0,36,980	0/0:24,0:24:72.25:0,72,2516	0/0:26,0:26:75.26:0,75,2636	0/0:26,0:26:78.23:0,78,2682	0/0:23,0:23:69.24:0,69,2405	0/0:20,0:20:60.21:0,60,2025	0/0:13,0:13:36.12:0,36,1256
chr10	88435608	.	C	CATTGT	8308.26	PASS	AB=0.538;AC=37;AF=0.685;AN=54;BaseQRankSum=11.205;DP=293;FS=5.870;HRun=0;HaplotypeScore=145.3526;InbreedingCoeff=0.8069;MQ=121.71;MQ0=0;MQRankSum=-12.749;QD=83.08;ReadPosRankSum=3.159;VQSLOD=7.1048;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,2391	0/0:4,0:4:12.04:0,12,280	0/0:29,0:29:87.22:0,87,1833	0/0:29,0:29:87.28:0,87,1842	0/1:1,6:7:19.69:416,0,20	1/1:0,5:5:15.05:473,15,0	1/1:2,0:2:6.02:125,6,0	./.	0/0:19,0:19:54.19:0,54,1259	0/0:22,0:22:66.22:0,66,1462	0/0:22,0:22:63.22:0,63,1467	1/1:1,5:6:18.06:561,18,0	1/1:1,5:6:15.05:470,15,0	1/1:2,5:7:21.07:575,21,0	1/1:0,3:3:9.03:282,9,0	1/1:0,9:9:27.09:843,27,0	0/0:30,0:30:90.30:0,90,2032	1/1:0,4:4:12.04:385,12,0	1/1:3,1:4:12.04:277,12,0	1/1:2,5:7:13.86:539,14,0	1/1:2,0:2:3.01:41,3,0	1/1:0,7:7:21.07:653,21,0	1/1:1,2:3:9.03:235,9,0	1/1:2,3:5:15.04:282,15,0	1/1:1,9:10:30.10:949,30,0	1/1:0,2:2:6.02:192,6,0	1/1:1,4:5:15.05:447,15,0	1/1:1,5:6:18.06:564,18,0
chr10	88435612	.	C	CCCTGGA	8254.22	PASS	AB=1.000;AC=36;AF=0.667;AN=54;BaseQRankSum=13.135;DP=291;FS=0.487;HRun=0;HaplotypeScore=151.3003;InbreedingCoeff=0.7943;MQ=121.93;MQ0=0;MQRankSum=-12.792;QD=84.23;ReadPosRankSum=7.831;VQSLOD=5.7535;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,2635	0/0:5,0:5:15.04:0,15,333	0/0:31,0:31:90.30:0,90,2108	0/0:27,0:27:81.28:0,81,2011	1/1:2,6:8:12.88:346,13,0	1/1:1,5:6:15.52:538,16,0	0/1:1,0:1:0:0,0,0	./.	0/0:19,0:19:57.20:0,57,1454	0/0:21,0:21:63.22:0,63,1608	0/0:22,0:22:66.23:0,66,1653	1/1:1,5:6:18.06:637,18,0	1/1:1,5:6:5.59:520,6,0	1/1:0,5:5:15.05:531,15,0	1/1:0,3:3:9.03:319,9,0	1/1:0,9:9:27.09:956,27,0	0/0:30,0:30:87.30:0,87,2213	1/1:1,4:5:12.04:436,12,0	1/1:1,1:2:2.98:110,3,0	1/1:1,5:6:18.06:597,18,0	0/1:2,0:2:0:0,0,0	1/1:1,7:8:22.32:742,22,0	1/1:0,2:2:6.02:212,6,0	1/1:3,3:6:7.01:174,7,0	1/1:2,9:11:27.08:963,27,0	1/1:0,2:2:6.02:217,6,0	1/1:0,4:4:12.04:428,12,0	1/1:1,5:6:2.38:528,2,0
chr10	88435613	.	T	TG	258.83	PASS	AB=1.000;AC=33;AF=0.611;AN=54;BaseQRankSum=12.246;DP=299;FS=17.699;HRun=0;HaplotypeScore=156.6717;InbreedingCoeff=0.6486;MQ=122.30;MQ0=0;MQRankSum=-11.933;QD=2.70;ReadPosRankSum=7.265;VQSLOD=1.1757;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,1473	0/0:5,0:5:15.05:0,15,209	0/0:32,0:32:93.30:0,93,1277	0/0:28,0:28:81.27:0,81,1128	1/1:8,0:8:2.87:60,3,0	1/1:7,0:7:11.35:44,11,0	1/1:0,1:1:2.97:20,3,0	./.	0/0:19,0:19:57.19:0,57,797	0/0:21,0:21:63.21:0,63,881	0/0:24,0:24:66.22:0,66,923	1/1:7,0:7:5.89:15,6,0	1/1:5,2:7:9.74:28,10,0	1/1:5,0:5:6.95:18,7,0	1/1:3,0:3:3.84:11,4,0	1/1:9,0:9:9.76:27,10,0	0/0:30,0:30:90.29:0,90,1242	0/0:5,0:5:0.07:0,0,0	0/1:2,0:2:0.01:0,0,0	1/1:6,0:6:9.35:36,9,0	1/1:1,0:1:2.98:21,3,0	1/1:8,0:8:16.97:68,17,0	1/1:2,0:2:3.62:12,4,0	0/1:7,0:7:2.93:5,0,3	1/1:10,1:11:16.04:44,16,0	1/1:2,0:2:3.63:14,4,0	1/1:4,0:4:4.93:14,5,0	0/1:6,0:6:1.16:1,0,11
chr10	88435616	.	T	TCCCTTCTTCTGGGG	43870.98	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=14.534;DP=484;FS=6.609;HRun=0;HaplotypeScore=268.7131;InbreedingCoeff=0.9669;MQ=100.92;MQ0=0;MQRankSum=-17.475;QD=157.24;ReadPosRankSum=4.639;VQSLOD=4.0440;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,108,4421	0/0:5,0:5:15.05:0,15,615	0/0:35,0:35:99:0,102,3435	0/0:29,0:29:81.28:0,81,3197	1/1:7,6:13:33.99:1818,34,0	1/1:8,5:13:36.11:1874,36,0	1/1:14,0:14:39.13:2175,39,0	1/1:3,0:3:6.02:203,6,0	0/0:21,0:21:63.22:0,63,2285	0/0:22,0:22:66.22:0,66,2730	0/0:21,0:21:63.22:0,63,2508	1/1:7,5:12:36.12:2100,36,0	1/1:14,5:19:51.16:3025,51,0	1/1:18,5:23:69.24:4178,69,0	1/1:13,3:16:48.16:2799,48,0	1/1:13,9:21:63.22:3960,63,0	0/0:32,0:32:96.32:0,96,3899	1/1:7,4:11:24.08:1434,24,0	1/1:10,1:10:30.10:1512,30,0	1/1:10,5:15:42.14:2263,42,0	1/1:5,0:5:9.03:397,9,0	1/1:15,7:22:63.22:3919,63,0	1/1:11,2:13:39.13:1891,39,0	1/1:13,3:16:33.11:1312,33,0	1/1:13,9:22:64.46:4062,64,0	1/1:6,2:8:24.08:1235,24,0	1/1:12,4:16:45.12:2648,45,0	1/1:0,5:5:15.05:1067,15,0
chr10	88437218	.	C	CACACACACAT	5389.19	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=-1.366;DP=535;FS=5.099;HRun=0;HaplotypeScore=161.9280;InbreedingCoeff=0.5732;MQ=56.66;MQ0=31;MQRankSum=1.935;QD=13.34;ReadPosRankSum=2.807;VQSLOD=3.6450;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:17.97:0,18,321	0/0:7,0:7:14.82:0,15,145	0/0:32,0:16:18:0,18,179	0/0:36,0:19:35.37:0,35,292	1/1:16,0:16:14.96:120,15,0	0/1:23,0:22:67.41:316,0,67	1/1:17,0:16:24.45:278,24,0	1/1:29,0:27:20.31:473,20,0	0/1:19,0:19:56.55:65,0,57	0/0:14,0:13:29.46:0,29,378	0/0:14,0:14:17.59:0,18,196	1/1:20,0:17:29.99:407,30,0	1/1:15,0:13:23.93:396,24,0	1/1:14,0:13:12:132,12,0	1/1:14,0:13:20.48:220,20,0	1/1:20,0:20:30.88:398,31,0	0/1:27,0:26:25.70:26,0,650	1/1:12,0:9:14.88:194,15,0	0/1:25,0:22:27.98:516,0,28	1/1:20,0:20:8.99:75,9,0	0/0:5,4:6:0:0,0,0	1/1:18,0:16:17.90:141,18,0	1/1:16,0:12:3:25,3,0	1/1:15,0:13:8.36:56,8,0	1/1:26,0:21:23.73:235,24,0	1/1:17,0:16:34.45:493,34,0	1/1:29,0:27:35.61:661,36,0	1/1:12,0:8:20.91:163,21,0
chr10	88437226	.	C	CAT	2903.84	PASS	AB=1.000;AC=29;AF=0.537;AN=54;BaseQRankSum=-2.874;DP=516;FS=2.879;HRun=0;HaplotypeScore=93.7562;InbreedingCoeff=0.2986;MQ=44.84;MQ0=33;MQRankSum=4.729;QD=8.23;ReadPosRankSum=1.679;VQSLOD=3.4367;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:17.96:0,18,167	0/0:8,0:8:14.97:0,15,129	0/0:24,0:8:18:0,18,179	0/0:28,0:15:35.37:0,35,291	0/1:12,0:12:6:102,0,6	0/1:20,0:19:16.98:223,0,17	1/1:20,0:18:20.97:174,21,0	0/1:32,0:29:99:310,0,117	0/0:21,0:21:13.52:0,14,96	0/0:14,0:13:38.78:0,39,325	0/0:13,0:13:17.57:0,18,148	1/1:20,0:17:23.97:207,24,0	1/1:15,0:13:20.76:194,21,0	0/1:13,0:12:8.97:96,0,9	1/1:15,0:14:20.48:170,20,0	1/1:23,0:23:13.96:282,14,0	0/0:28,0:27:44.90:0,45,409	0/1:12,0:8:43.90:69,0,44	0/1:22,0:19:99:166,0,130	1/1:12,5:17:8.99:75,9,0	./.	1/1:12,4:15:17.90:141,18,0	1/1:12,2:10:3:25,3,0	1/1:15,0:13:8.36:56,8,0	1/1:25,0:20:23.82:210,24,0	0/1:19,0:18:94.75:194,0,95	0/1:28,0:26:33.65:266,0,34	0/1:14,0:9:16.11:136,0,16
chr10	88438479	.	C	CGTGTGT	894.25	PASS	AB=1.000;AC=29;AF=0.604;AN=48;BaseQRankSum=-1.857;DP=612;FS=4.288;HRun=0;HaplotypeScore=159.5581;InbreedingCoeff=0.4331;MQ=65.90;MQ0=17;MQRankSum=0.165;QD=2.56;ReadPosRankSum=-0.537;VQSLOD=1.9612;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:8.98:0,9,107	0/0:5,0:5:3.01:0,3,60	./.	./.	1/1:20,0:20:3.01:66,3,0	1/1:19,4:22:3.01:88,3,0	1/1:25,0:29:3.01:38,3,0	1/1:18,0:18:2.80:13,3,0	1/1:10,7:20:6.02:135,6,0	0/0:28,0:28:6.53:0,7,147	0/0:11,0:11:3.01:0,3,42	1/1:15,4:23:2.88:96,3,0	1/1:14,0:13:6.02:107,6,0	1/1:31,0:31:2.99:25,3,0	1/1:31,0:28:6.02:116,6,0	1/1:25,0:24:5.99:49,6,0	0/0:24,0:24:9.01:0,9,133	1/1:18,0:14:6.88:93,7,0	./.	./.	0/0:21,0:21:0:0,0,0	0/1:17,0:17:32.97:33,0,54	1/1:22,0:22:2.99:24,3,0	1/1:36,0:33:6:86,6,0	0/0:9,0:19:15.05:0,15,210	0/0:18,0:25:14.03:0,14,176	1/1:17,0:17:3.01:76,3,0	0/0:5,0:6:3.01:0,3,42
chr10	88438520	.	G	GTGTGTG	719.69	PASS	AB=1.000;AC=30;AF=0.600;AN=50;BaseQRankSum=-2.087;DP=550;FS=2.659;HRun=0;HaplotypeScore=132.0342;InbreedingCoeff=0.4207;MQ=58.53;MQ0=19;MQRankSum=-0.631;QD=2.09;ReadPosRankSum=-4.088;VQSLOD=0.7949;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:8.54:0,9,106	0/0:4,0:4:3.01:0,3,60	1/1:28,0:17:0.47:1,0,0	./.	1/1:17,0:17:3.48:67,3,0	1/1:26,0:24:3.48:88,3,0	1/1:26,0:24:3.95:40,4,0	0/1:18,0:18:0:0,0,0	1/1:16,0:16:6.02:135,6,0	0/0:15,0:15:7.71:0,8,148	0/0:10,0:10:3.01:0,3,30	1/1:21,0:21:3.48:97,3,0	1/1:15,0:13:3.01:33,3,0	1/1:16,4:21:3.46:25,3,0	1/1:26,0:23:2.67:39,3,0	1/1:24,0:23:4.24:28,4,0	0/0:30,0:29:7.95:0,8,132	1/1:16,0:12:6:91,6,0	./.	./.	0/0:16,0:16:2.55:0,3,12	0/1:12,0:12:32.79:33,0,53	1/1:19,0:19:2.99:24,3,0	1/1:38,0:35:6.11:87,6,0	0/0:20,0:20:15.05:0,15,210	0/0:22,0:22:14.94:0,15,178	1/1:22,0:21:5.52:82,6,0	0/0:7,0:7:1.95:0,2,40
chr10	88439578	.	TTA	T	12253.45	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=20.243;DP=674;FS=5.786;HRun=0;HaplotypeScore=116.6748;InbreedingCoeff=0.9995;MQ=72.05;MQ0=0;MQRankSum=-2.743;QD=43.45;ReadPosRankSum=0.293;VQSLOD=6.0301;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,2183	0/0:9,0:9:24.08:0,24,486	0/0:22,0:22:56.27:0,56,853	0/0:11,0:11:26.94:0,27,453	1/1:0,43:43:99:1899,129,0	1/1:0,12:12:33.11:533,33,0	1/1:0,21:21:60.20:973,60,0	1/1:0,37:37:99:1560,107,0	0/0:30,0:30:90.29:0,90,1750	0/0:36,0:36:99:0,108,2039	0/0:16,0:16:45.15:0,45,903	1/1:0,22:22:60.10:967,60,0	0/0:30,0:30:90.29:0,90,1760	1/1:0,20:20:45.15:724,45,0	0/0:26,0:26:75.22:0,75,1365	0/0:20,0:20:60.19:0,60,1178	0/0:21,0:21:63.20:0,63,1240	1/1:0,15:15:36.12:584,36,0	0/0:24,0:24:72.17:0,72,1279	0/0:24,0:24:69.21:0,69,1272	1/1:0,20:20:51.17:826,51,0	1/1:0,19:19:57.07:860,57,0	0/0:25,0:25:75.17:0,75,1371	0/0:27,0:27:81.19:0,81,1472	1/1:1,23:24:63.22:1021,63,0	1/1:0,34:34:99:1582,102,0	0/0:34,0:34:99:0,102,2065	1/1:0,15:15:45.15:724,45,0
chr10	88439937	.	GA	G	7414.66	PASS	AB=0.523;AC=23;AF=0.411;AN=56;BaseQRankSum=19.191;DP=703;FS=0.000;HRun=7;HaplotypeScore=95.2308;InbreedingCoeff=0.9395;MQ=80.27;MQ0=0;MQRankSum=-2.046;QD=25.31;ReadPosRankSum=1.328;VQSLOD=4.9422;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.27:0,93,1143	0/0:18,0:18:45.14:0,45,566	0/0:27,0:27:48.26:0,48,819	0/0:18,0:18:20.26:0,20,506	1/1:2,45:47:99:1040,102,0	1/1:2,20:22:60.13:612,60,0	1/1:1,23:24:60.14:612,60,0	1/1:6,31:37:90.18:911,90,0	0/0:25,0:25:69.17:0,69,837	0/0:24,0:24:63.19:0,63,779	0/0:27,0:27:66.21:0,66,826	1/1:0,20:20:57.13:582,57,0	0/0:26,1:27:38.54:0,39,755	1/1:4,16:20:36.07:367,36,0	0/0:28,0:28:72.21:0,72,881	0/0:23,0:23:63.20:0,63,793	0/0:32,0:31:90.27:0,90,1118	1/1:0,13:13:39.09:398,39,0	0/0:17,0:17:45.12:0,45,550	0/0:43,0:43:99:0,114,1421	1/1:1,19:20:54.12:551,54,0	1/1:1,32:33:84.18:856,84,0	0/0:22,0:22:66.21:0,66,830	0/0:16,0:16:42.13:0,42,528	1/1:1,21:22:60.14:612,60,0	0/1:2,21:23:6.34:567,0,6	0/0:30,0:30:78.18:0,78,937	1/1:0,12:12:30.07:306,30,0
chr10	88441804	.	T	TG	15268.38	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-16.942;DP=833;FS=0.815;HRun=0;HaplotypeScore=81.2167;InbreedingCoeff=0.9998;MQ=77.09;MQ0=0;MQRankSum=-2.222;QD=44.91;ReadPosRankSum=1.204;VQSLOD=5.0650;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,1980	0/0:9,0:9:27.09:0,27,378	0/0:18,0:18:37.08:0,37,545	0/0:28,0:28:78.03:0,78,980	1/1:0,27:27:72.18:1121,72,0	1/1:1,24:25:69.24:1103,69,0	1/1:1,26:28:78.27:1237,78,0	1/1:0,35:35:99:1627,105,0	0/0:40,0:40:99:0,120,1662	0/0:36,0:36:99:0,105,1467	0/0:17,0:17:51.17:0,51,713	1/1:0,41:41:99:1822,114,0	0/0:40,0:40:99:0,120,1677	1/1:0,35:35:99:1582,99,0	0/0:35,0:35:99:0,105,1468	0/0:36,0:36:99:0,108,1494	0/0:35,0:35:99:0,105,1467	1/1:0,20:20:57.19:911,57,0	0/0:23,0:23:69.17:0,69,912	0/0:27,0:27:81.27:0,81,1132	1/1:0,32:32:87.30:1388,87,0	1/1:0,32:32:96.33:1534,96,0	0/0:28,0:28:81.25:0,81,1100	0/0:39,0:39:99:0,117,1616	1/1:0,18:18:51.17:815,51,0	1/1:1,35:36:99:1650,105,0	0/0:32,0:32:96.31:0,96,1327	1/1:0,11:11:30.10:479,30,0
chr10	88442882	.	GGGCA	G	20128.18	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=14.177;DP=650;FS=2.300;HRun=0;HaplotypeScore=126.0376;InbreedingCoeff=0.9939;MQ=84.15;MQ0=1;MQRankSum=-5.475;QD=45.13;ReadPosRankSum=4.940;VQSLOD=5.3888;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,3182	0/0:4,0:4:12.04:0,12,310	0/0:25,0:26:62.40:0,62,1573	0/0:19,0:19:54.14:0,54,1166	1/1:0,26:26:62.92:1028,63,0	1/1:0,27:27:72.25:1340,72,0	1/1:1,14:15:39.13:725,39,0	1/1:2,20:22:57.18:1032,57,0	0/0:27,0:27:75.24:0,75,1911	0/0:37,0:37:99:0,102,2524	0/0:14,0:14:42.14:0,42,1025	1/1:3,25:28:66.17:1226,66,0	1/1:2,33:35:90.31:1679,90,0	1/1:0,16:16:33.11:616,33,0	1/1:1,23:24:60.21:1116,60,0	1/1:2,28:30:72.25:1341,72,0	0/0:32,0:32:93.28:0,93,2352	1/1:1,20:21:37.22:935,37,0	1/1:0,11:11:27.06:440,27,0	1/1:1,20:21:57.10:990,57,0	1/1:1,35:35:90.31:1680,90,0	1/1:0,13:13:33.07:579,33,0	1/1:1,20:21:54.19:1008,54,0	1/1:1,35:36:87.29:1619,87,0	1/1:0,17:17:42.14:784,42,0	1/1:1,14:15:42.07:703,42,0	1/1:0,24:24:48.64:896,49,0	1/1:0,8:8:21.07:392,21,0
chr10	88443064	.	T	TTC	1167.89	PASS	AB=0.934;AC=23;AF=0.411;AN=56;BaseQRankSum=2.995;DP=545;FS=18.733;HRun=0;HaplotypeScore=141.9931;InbreedingCoeff=-0.2751;MQ=63.89;MQ0=10;MQRankSum=-5.819;QD=3.58;ReadPosRankSum=0.329;VQSLOD=1.8130;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:72.22:0,72,1071	0/0:8,0:8:15.03:0,15,208	0/0:43,0:16:32.39:0,32,406	0/0:37,0:25:4.29:0,4,541	0/1:23,3:26:57.41:92,0,57	0/1:9,1:10:6.25:75,0,6	1/1:11,0:11:7.34:52,7,0	0/1:25,0:24:34.87:122,0,35	0/0:18,0:17:39.13:0,39,580	0/0:22,0:21:48.72:0,49,700	0/0:19,0:19:49.39:0,49,712	0/1:14,1:14:14.30:123,0,14	0/1:8,7:16:2.66:30,0,3	0/1:7,1:8:16.69:17,0,43	0/1:19,1:20:64.50:65,0,71	1/1:13,0:13:6.60:119,7,0	0/0:39,0:39:99:0,102,1503	0/1:9,0:9:6.73:7,0,14	0/1:28,0:26:60.88:87,0,61	0/1:24,2:25:72.54:82,0,73	1/1:10,0:6:0.51:6,1,0	0/1:17,1:18:26.66:101,0,27	0/1:16,1:17:19.05:93,0,19	0/1:13,0:13:30.91:31,0,31	0/1:19,0:18:32.80:39,0,33	0/1:15,1:15:53.72:64,0,54	0/1:17,3:19:63.79:99,0,64	0/1:6,0:6:23.11:27,0,23
chr10	88443065	.	T	TC	403.19	PASS	AB=0.963;AC=18;AF=0.321;AN=56;BaseQRankSum=3.041;DP=537;FS=56.966;HRun=0;HaplotypeScore=133.6495;InbreedingCoeff=-0.2904;MQ=62.17;MQ0=10;MQRankSum=-4.106;QD=1.36;ReadPosRankSum=1.500;VQSLOD=0.7452;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:72.22:0,72,981	0/0:7,0:7:15.05:0,15,208	0/0:40,0:14:32.95:0,33,401	0/0:35,0:25:46.88:0,47,555	0/1:24,2:26:40.50:41,0,87	0/1:9,1:10:26.10:54,0,26	1/1:10,0:10:3.14:35,3,0	0/1:25,0:25:61.69:65,0,62	0/0:18,0:17:39.10:0,39,514	0/0:22,0:21:50.65:0,51,668	0/0:19,0:19:51.15:0,51,688	0/1:15,0:14:23.18:37,0,23	0/1:15,0:15:3.47:3,0,14	0/0:8,0:8:3.89:0,4,59	0/1:20,0:20:4.88:5,0,115	0/1:11,1:13:1.35:47,0,1	0/0:39,0:39:99:0,102,1390	0/1:7,1:9:11.38:11,0,35	0/1:27,0:25:29.02:29,0,105	0/1:25,0:24:27.37:27,0,84	0/0:10,0:6:0.19:0,0,2	0/1:14,2:17:19.31:60,0,19	0/1:14,3:17:28.06:56,0,28	0/1:12,0:13:22.51:23,0,26	0/1:19,0:18:7.72:8,0,43	0/1:15,0:14:27.82:28,0,90	0/1:20,0:19:25.22:25,0,53	0/0:6,0:6:0.93:0,1,55
chr10	88443088	.	G	GTT	1991.22	PASS	AB=0.974;AC=26;AF=0.464;AN=56;BaseQRankSum=8.162;DP=544;FS=13.841;HRun=9;HaplotypeScore=103.9680;InbreedingCoeff=0.7151;MQ=43.35;MQ0=26;MQRankSum=-7.238;QD=8.19;ReadPosRankSum=-1.008;VQSLOD=-0.0347;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:29.77:0,30,318	0/0:8,0:8:12:0,12,127	0/0:27,0:5:2.12:0,2,12	0/1:17,0:8:0:0,0,0	1/1:19,8:28:25.45:251,25,0	1/1:5,8:13:13.35:161,13,0	1/1:10,4:13:9.46:114,9,0	1/1:14,0:20:28.76:276,29,0	0/0:18,0:16:3.49:0,3,116	0/0:20,0:19:1.13:0,1,189	0/0:15,0:15:0.33:0,0,108	1/1:15,3:15:13.75:165,14,0	0/0:12,0:12:2.25:0,2,110	1/1:4,5:9:12.02:163,12,0	0/0:24,0:24:29.60:0,30,369	0/0:20,0:19:22.92:0,23,309	0/0:40,0:39:11.46:0,11,429	1/1:9,3:13:9.65:142,10,0	0/0:28,0:25:33.72:0,34,381	0/0:24,0:23:26.43:0,26,312	1/1:8,0:6:0.47:1,0,0	1/1:9,11:19:19:277,19,0	0/0:20,0:19:16.53:0,17,189	0/0:18,0:17:14.21:0,14,156	1/1:15,4:18:9.50:140,10,0	1/1:9,1:17:28.30:282,28,0	0/1:19,0:18:3.05:3,0,194	1/1:15,0:16:24.44:208,24,0
chr10	88443387	.	GCT	G	2664.05	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.591;DP=601;FS=2.348;HRun=0;HaplotypeScore=104.2695;InbreedingCoeff=0.9976;MQ=81.87;MQ0=0;MQRankSum=-5.469;QD=42.97;ReadPosRankSum=2.358;VQSLOD=5.1393;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.27:0,78,1560	0/0:11,0:11:33.11:0,33,670	0/0:18,0:17:51.14:0,51,946	0/0:20,0:19:43.02:0,43,790	0/0:30,0:30:84.29:0,84,1693	0/0:17,0:16:51.18:0,51,1036	0/0:18,0:18:54.19:0,54,1074	1/1:0,18:18:45.15:722,45,0	0/0:19,0:19:57.20:0,57,1144	0/0:18,0:18:54.19:0,54,1090	0/0:27,0:27:81.28:0,81,1631	0/0:23,0:23:69.24:0,69,1401	0/0:20,0:20:57.20:0,57,1155	0/0:11,0:11:33.11:0,33,669	0/0:21,0:21:60.21:0,60,1219	0/0:30,0:30:90.31:0,90,1829	0/0:17,0:17:51.18:0,51,1036	0/0:38,0:38:99:0,114,2291	0/0:26,0:26:78.26:0,78,1551	0/0:24,0:24:72.25:0,72,1463	1/1:0,7:7:18.06:293,18,0	0/0:19,0:19:45.15:0,45,913	0/0:31,0:31:90.31:0,90,1815	0/0:18,0:18:54.19:0,54,1084	0/0:19,0:19:51.18:0,51,1036	1/1:0,24:24:72.25:1173,72,0	0/0:37,0:37:99:0,111,2220	1/1:0,13:13:39.13:635,39,0
chr10	88443597	.	T	TC	17656.03	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=2.927;DP=643;FS=1.406;HRun=1;HaplotypeScore=124.4739;InbreedingCoeff=0.9994;MQ=85.18;MQ0=0;MQRankSum=-12.524;QD=39.50;ReadPosRankSum=1.579;VQSLOD=4.5481;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,1322	0/0:9,0:9:27.09:0,27,350	0/0:25,0:25:66.19:0,66,839	0/0:26,0:26:75.19:0,75,924	1/1:2,19:21:57.17:830,57,0	1/1:3,15:18:48.08:657,48,0	1/1:3,29:32:87.25:1268,87,0	1/1:2,18:20:57.19:832,57,0	0/0:26,0:26:69.20:0,69,868	0/0:18,0:18:54.18:0,54,701	0/0:19,0:19:54.18:0,54,701	1/1:3,20:23:69.14:962,69,0	1/1:1,28:29:87.29:1281,87,0	1/1:2,18:20:57.14:808,57,0	1/1:1,27:28:78.22:1140,78,0	1/1:1,25:26:75.20:1075,75,0	0/0:36,0:36:99:0,108,1370	1/1:0,15:15:45.15:673,45,0	1/1:2,6:8:24.08:357,24,0	1/1:2,26:28:72.24:1073,72,0	1/1:2,26:28:69.16:967,69,0	1/1:3,17:20:51.16:742,51,0	1/1:4,23:27:60.07:856,60,0	1/1:2,23:25:58.50:909,59,0	1/1:1,16:19:45.10:619,45,0	1/1:3,20:23:66.22:976,66,0	1/1:0,25:26:78.22:1139,78,0	1/1:0,11:11:33.11:493,33,0
chr10	88443630	.	A	ATGT	28491.13	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=8.360;DP=684;FS=0.663;HRun=0;HaplotypeScore=138.0852;InbreedingCoeff=0.9997;MQ=71.87;MQ0=0;MQRankSum=-12.637;QD=57.79;ReadPosRankSum=-1.471;VQSLOD=5.7397;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,2060	0/0:12,0:12:36.12:0,36,599	0/0:20,0:20:44.10:0,44,663	0/0:12,0:12:29.51:0,30,362	1/1:6,18:24:51.13:1105,51,0	1/1:3,21:24:60.21:1356,60,0	1/1:6,26:32:93.20:1957,93,0	1/1:10,24:34:99:2115,99,0	0/0:23,0:23:66.21:0,66,1074	0/0:19,0:19:51.17:0,51,846	0/0:28,0:28:81.22:0,81,1288	1/1:3,21:24:66.23:1478,66,0	1/1:4,33:37:99:2336,105,0	1/1:1,27:29:84.29:1898,84,0	1/1:5,23:30:78.25:1701,78,0	1/1:4,22:26:63.21:1382,63,0	0/0:34,0:34:93.29:0,93,1521	1/1:2,13:15:39.09:822,39,0	1/1:2,17:20:57.15:1153,57,0	1/1:5,20:25:63.22:1406,63,0	1/1:4,15:21:48.12:995,48,0	1/1:2,18:24:54.19:1219,54,0	1/1:2,22:25:66.23:1491,66,0	1/1:4,18:22:48.16:1084,48,0	1/1:3,19:23:63.22:1407,63,0	1/1:0,27:28:84.27:1830,84,0	1/1:5,15:21:57.16:1200,57,0	1/1:4,5:9:27.08:556,27,0
chr10	88445147	.	TAAAA	T	5352.97	PASS	AB=0.929;AC=17;AF=0.304;AN=56;BaseQRankSum=11.908;DP=608;FS=23.109;HRun=13;HaplotypeScore=126.0375;InbreedingCoeff=0.8955;MQ=67.97;MQ0=1;MQRankSum=-4.995;QD=27.17;ReadPosRankSum=6.387;VQSLOD=1.6071;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:50:99:0,144,3040	0/0:10,0:11:30.10:0,30,682	0/1:12,0:13:3.82:4,0,241	0/0:6,0:6:8.92:0,9,158	0/0:13,0:13:36.12:0,36,813	0/0:11,0:11:30.09:0,30,660	0/0:25,0:28:72.23:0,72,1510	0/0:14,0:43:84.25:0,84,503	0/0:2,0:20:45.14:0,45,560	0/0:21,0:23:57.19:0,57,1273	0/0:19,0:20:54.19:0,54,1241	0/0:19,0:19:42.13:0,42,931	1/1:4,19:23:54.06:742,54,0	0/0:18,0:18:51.18:0,51,1206	1/1:5,14:19:36.09:519,36,0	1/1:5,16:22:10.79:621,11,0	0/0:37,0:38:90.18:0,90,1947	0/0:20,0:20:54.19:0,54,1295	1/1:3,23:26:66.13:944,66,0	1/1:7,15:22:42.04:607,42,0	0/0:4,0:26:49.72:0,50,291	0/0:18,0:20:51.17:0,51,1137	1/1:3,7:10:20.99:268,21,0	1/1:6,31:37:66.16:952,66,0	0/0:18,0:18:45.15:0,45,685	0/0:5,0:22:52.85:0,53,330	1/1:5,20:24:48.10:696,48,0	0/0:4,0:5:2.92:0,3,17
chr10	88445160	.	AG	A	463.12	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=1.260;DP=623;FS=14.825;HRun=1;HaplotypeScore=116.1142;InbreedingCoeff=0.6390;MQ=65.43;MQ0=1;MQRankSum=1.787;QD=14.94;ReadPosRankSum=0.648;VQSLOD=2.3099;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,112,1249	0/0:11,0:11:28.28:0,28,326	0/1:10,0:10:2.44:2,0,140	0/0:7,0:7:7.21:0,7,137	0/0:23,0:23:56.86:0,57,537	0/0:14,1:14:35.95:0,36,378	0/0:24,0:24:62.98:0,63,673	0/0:40,0:40:99:0,109,721	0/0:26,0:26:14.90:0,15,169	0/0:29,0:29:80.27:0,80,847	0/0:21,0:21:57.07:0,57,658	0/0:17,0:17:47.98:0,48,476	0/0:26,0:26:68.92:0,69,385	0/0:20,0:20:47.69:0,48,549	0/0:16,0:16:38.65:0,39,209	0/0:22,0:22:56.46:0,56,316	0/0:30,0:30:80.95:0,81,911	0/0:19,0:19:54.08:0,54,640	0/0:28,0:28:75.42:0,75,439	0/0:17,0:17:42.76:0,43,233	0/0:31,0:31:69.49:0,69,426	0/0:23,0:23:67.31:0,67,699	0/0:12,0:12:33.93:0,34,179	0/0:40,0:40:76.39:0,76,386	1/1:0,21:21:42.10:557,42,0	0/0:25,0:25:63.66:0,64,477	0/0:26,0:25:60.90:0,61,325	0/0:2,0:2:5.84:0,6,35
chr10	88445963	.	TAC	T	341.57	PASS	AB=0.977;AC=18;AF=0.360;AN=50;BaseQRankSum=1.977;DP=515;FS=4.794;HRun=0;HaplotypeScore=129.8013;InbreedingCoeff=0.1511;MQ=52.15;MQ0=10;MQRankSum=-1.292;QD=1.48;ReadPosRankSum=-0.671;VQSLOD=2.2499;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:30:1.59:2,0,46	0/0:4,0:4:2.94:0,3,18	./.	./.	./.	0/0:19,0:18:6:0,6,60	0/0:29,0:29:2.40:0,2,19	0/0:28,0:27:5.92:0,6,39	0/1:14,1:14:16.81:17,0,110	0/1:12,0:12:15.93:26,0,16	0/1:6,1:6:26.04:26,0,38	0/0:12,0:12:3.01:0,3,38	1/1:17,0:18:14.03:104,14,0	0/1:17,0:17:0.14:0,0,0	0/0:27,0:27:7.62:0,8,33	0/1:21,0:20:38.74:53,0,39	0/0:26,0:26:26.40:0,26,234	0/0:15,0:15:3.51:0,4,27	0/1:12,0:12:0.12:0,0,45	0/0:14,0:14:0:0,0,0	1/1:39,0:38:4.20:21,4,0	0/0:23,0:23:16.13:0,16,112	0/0:17,0:17:0.47:0,0,1	0/0:31,0:29:5.57:0,6,25	1/1:7,5:11:3.01:31,3,0	1/1:19,2:21:14.22:118,14,0	0/1:22,0:21:23.58:51,0,24	1/1:3,1:4:3.01:31,3,0
chr10	88445998	.	A	ATG	933.96	PASS	AB=0.960;AC=13;AF=0.232;AN=56;BaseQRankSum=3.490;DP=577;FS=8.543;HRun=0;HaplotypeScore=158.5749;InbreedingCoeff=0.4272;MQ=45.66;MQ0=30;MQRankSum=1.265;QD=6.44;ReadPosRankSum=0.025;VQSLOD=2.8617;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:37:66.21:0,66,993	0/0:8,0:8:15.05:0,15,230	0/0:3,0:1:3.01:0,3,42	0/0:4,0:1:3.01:0,3,44	0/0:16,0:16:6.02:0,6,83	0/0:24,0:23:20.78:0,21,283	0/0:26,0:25:29.97:0,30,375	0/0:26,0:23:75.18:0,75,951	0/0:16,0:15:38.79:0,39,531	0/0:18,0:13:36.10:0,36,505	0/0:11,0:9:18.05:0,18,258	0/0:19,0:17:11.96:0,12,141	0/1:19,3:21:71.87:204,0,72	0/0:20,0:19:24.05:0,24,326	1/1:20,5:23:3.99:177,4,0	0/0:31,0:30:33.36:0,33,370	0/0:33,0:32:84.28:0,84,1284	0/0:23,0:21:26.80:0,27,364	0/1:16,0:16:54.97:55,0,269	1/1:16,1:17:8.99:123,9,0	0/0:51,0:46:33.58:0,34,478	0/0:28,0:28:14.82:0,15,321	1/1:17,3:20:5.86:83,6,0	1/1:20,4:21:0.57:206,1,0	1/1:8,0:6:2.50:9,2,0	0/0:27,0:26:75.16:0,75,976	0/1:13,0:12:21.50:225,0,22	0/0:7,0:6:6.01:0,6,63
chr10	88446008	.	ACACG	A	2174	PASS	AB=0.989;AC=34;AF=0.654;AN=52;BaseQRankSum=6.972;DP=605;FS=41.419;HRun=0;HaplotypeScore=189.4078;InbreedingCoeff=0.0640;MQ=45.45;MQ0=32;MQRankSum=-1.581;QD=4.09;ReadPosRankSum=-3.400;VQSLOD=0.5702;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:36:41.59:42,0,436	0/0:8,0:8:14.30:0,14,138	./.	./.	1/1:17,0:17:2.99:24,3,0	0/1:25,0:24:8.03:63,0,8	0/1:22,0:21:2.78:68,0,3	1/1:26,0:24:0.52:234,1,0	0/1:16,0:15:2.77:3,0,414	0/0:20,0:15:7.31:0,7,260	0/0:12,0:10:8.38:0,8,173	0/1:22,0:20:19.10:19,0,25	1/1:18,4:21:32.75:325,33,0	1/1:21,0:20:3.45:87,3,0	0/1:27,2:27:11.59:13,0,12	0/1:36,0:35:4.95:158,0,5	0/0:29,0:28:54.12:0,54,594	1/1:25,0:23:12.43:193,12,0	0/1:18,1:17:8.72:159,0,9	1/1:17,1:18:5.80:39,6,0	1/1:59,0:54:11.40:179,11,0	0/1:27,0:27:17.07:119,0,17	1/1:15,3:18:5.21:47,5,0	1/1:20,1:18:2.83:19,3,0	1/1:18,0:16:2.04:6,2,0	0/1:28,0:27:45.19:287,0,45	1/1:9,5:13:23.25:211,23,0	1/1:7,0:6:7.26:35,7,0
chr10	88446011	.	C	CAT	416.01	PASS	AB=1.000;AC=17;AF=0.315;AN=54;BaseQRankSum=6.349;DP=598;FS=7.383;HRun=0;HaplotypeScore=168.1796;InbreedingCoeff=0.4566;MQ=45.47;MQ0=32;MQRankSum=-5.457;QD=1.93;ReadPosRankSum=-1.055;VQSLOD=1.4798;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:39:68.51:0,69,522	0/0:8,0:8:14.89:0,15,108	./.	0/0:7,0:1:2.97:0,3,20	0/0:18,0:18:2.97:0,3,20	0/0:24,0:23:11.64:0,12,70	0/0:22,0:21:1.47:0,1,29	0/0:27,0:25:68.39:0,68,401	0/0:17,0:16:23.48:0,23,299	0/0:20,0:15:40.35:0,40,270	0/0:12,0:10:20.92:0,21,183	0/0:21,0:19:2.69:0,3,24	1/1:18,3:20:6.13:108,6,0	0/0:20,0:19:14.83:0,15,102	1/1:21,3:22:8:73,8,0	0/1:33,0:32:29.23:29,0,100	0/0:30,0:28:65.71:0,66,618	0/1:26,0:24:13.31:13,0,126	1/1:17,0:15:27.50:243,27,0	1/1:16,1:17:3.35:16,3,0	0/0:60,0:55:31.62:0,32,201	0/1:27,0:27:2.62:3,0,114	1/1:15,3:18:3.62:10,4,0	1/1:15,4:16:2.84:14,3,0	0/0:17,0:16:1.82:0,2,5	0/0:28,0:27:68.97:0,69,392	1/1:12,0:12:2.18:63,2,0	0/0:5,0:4:5.16:0,5,39
chr10	88446012	.	GCA	G	1638.14	PASS	AB=0.820;AC=22;AF=0.407;AN=54;BaseQRankSum=7.242;DP=599;FS=4.789;HRun=0;HaplotypeScore=162.4053;InbreedingCoeff=0.2833;MQ=45.62;MQ0=31;MQRankSum=-3.042;QD=4.71;ReadPosRankSum=0.122;VQSLOD=3.0382;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:40:57.15:0,57,800	0/0:8,0:8:18.06:0,18,260	0/0:4,0:2:5.93:0,6,64	0/0:8,0:2:3:0,3,25	./.	0/0:24,0:23:2.99:0,3,35	0/0:21,1:21:2.83:0,3,20	1/1:7,20:25:44.76:490,45,0	0/0:17,0:16:26.03:0,26,437	0/0:20,0:15:36.12:0,36,550	0/0:13,0:11:15.92:0,16,263	0/0:21,0:19:2.84:0,3,38	1/1:14,7:20:26.68:219,27,0	0/1:20,0:19:0:0,0,0	0/0:15,9:22:2.74:0,3,12	0/1:16,17:32:12.26:165,0,12	0/1:25,4:27:49.99:50,0,613	0/1:24,0:22:8.11:8,0,18	1/1:13,4:15:4.34:177,4,0	1/1:5,12:17:3.01:33,3,0	0/1:23,37:55:27.61:29,0,28	0/0:26,1:27:1.57:0,2,67	0/1:11,7:18:0.16:0,0,1	1/1:15,4:16:2.90:30,3,0	0/1:17,0:16:0:0,0,0	0/1:15,13:27:45.71:406,0,46	1/1:10,3:12:15.47:157,15,0	1/1:3,2:4:3.01:31,3,0
chr10	88446020	.	ACACACACATG	A	1948.88	PASS	AB=1.000;AC=11;AF=0.212;AN=52;BaseQRankSum=4.894;DP=611;FS=1.217;HRun=0;HaplotypeScore=205.8107;InbreedingCoeff=-0.0429;MQ=45.87;MQ0=30;MQRankSum=-7.463;QD=8.44;ReadPosRankSum=2.843;VQSLOD=2.4284;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:36:63.22:0,63,2047	0/0:8,0:8:21.07:0,21,779	0/0:6,0:4:12.04:0,12,290	0/1:14,0:5:3.77:4,0,178	./.	0/0:23,0:22:2.85:0,3,35	0/1:26,0:25:11.34:44,0,11	0/1:29,0:28:10.30:10,0,1036	0/0:17,0:16:39.13:0,39,1287	0/0:18,0:13:36.12:0,36,1261	0/0:13,0:11:0.07:0,0,660	0/0:21,0:19:2.75:0,3,20	0/1:20,0:20:22.17:294,0,22	0/0:21,0:20:0:0,0,0	0/0:26,0:24:19.13:0,19,112	0/1:33,0:32:55.94:145,0,56	0/0:29,0:27:67.78:0,68,1951	1/1:24,0:23:25.90:567,26,0	0/1:16,0:13:29.72:171,0,30	0/0:21,0:21:5.22:0,5,66	0/0:57,0:51:14.75:0,15,303	0/1:28,0:28:5.07:675,0,5	0/0:17,0:18:7.74:0,8,24	0/1:24,0:22:27.79:28,0,54	./.	0/0:25,0:25:28.82:0,29,1139	0/1:15,0:14:99:149,0,105	0/0:4,0:4:3.01:0,3,40
chr10	88446027	.	CAT	C	556.19	PASS	AB=0.994;AC=16;AF=0.308;AN=52;BaseQRankSum=5.913;DP=628;FS=1.652;HRun=0;HaplotypeScore=173.7411;InbreedingCoeff=0.1475;MQ=47.91;MQ0=28;MQRankSum=-3.830;QD=2.19;ReadPosRankSum=5.137;VQSLOD=2.6208;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:32:69.08:0,69,1201	0/0:11,0:11:24.05:0,24,399	0/0:16,0:11:29.15:0,29,279	0/1:21,0:11:9.98:10,0,192	./.	0/0:20,0:20:2.81:0,3,20	1/1:26,0:25:2.94:18,3,0	0/1:24,0:24:99:99,0,164	0/0:18,0:17:41.79:0,42,663	0/0:19,0:14:42.13:0,42,780	0/0:12,0:10:26.29:0,26,420	0/0:19,0:17:2.84:0,3,14	0/1:22,0:21:37.13:37,0,49	./.	0/0:29,0:27:25.72:0,26,112	0/1:35,0:34:31.55:32,0,151	0/0:32,1:31:6.15:0,6,967	1/1:24,1:23:18.72:141,19,0	0/1:20,1:18:33.42:33,0,115	0/0:22,0:22:1.38:0,1,38	0/0:58,0:53:13.23:0,13,190	1/1:27,0:27:10.03:164,10,0	0/0:22,1:23:21.02:0,21,104	0/0:25,0:23:3.37:0,3,47	0/1:14,0:14:0:0,0,0	0/1:22,0:21:99:131,0,199	0/1:15,0:14:32.06:32,0,62	1/1:2,0:2:2.68:11,3,0
chr10	88446028	.	ATG	A	821.54	PASS	AB=0.841;AC=14;AF=0.269;AN=52;BaseQRankSum=6.040;DP=620;FS=0.000;HRun=0;HaplotypeScore=169.6544;InbreedingCoeff=0.1694;MQ=49.33;MQ0=24;MQRankSum=-6.110;QD=3.25;ReadPosRankSum=2.852;VQSLOD=2.7135;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:32:69.24:0,69,1335	0/0:11,0:11:27.07:0,27,484	0/0:17,0:12:32.59:0,33,515	0/1:17,5:12:45.20:45,0,407	./.	0/1:0,18:18:0.01:0,0,0	1/1:6,19:24:3:35,3,0	0/0:25,0:25:66.85:0,67,680	0/0:19,0:18:44.36:0,44,786	0/0:19,0:14:42.14:0,42,841	0/0:11,0:10:21.89:0,22,469	0/0:2,16:17:2.97:0,3,20	0/1:21,1:21:27.32:75,0,27	./.	0/0:29,0:27:24.10:0,24,85	0/1:35,0:34:30.21:30,0,146	0/1:33,0:31:5.28:5,0,1185	1/1:4,20:22:0.24:275,0,0	0/1:21,0:18:34.98:35,0,55	0/0:22,0:22:5.02:0,5,35	0/0:55,2:53:24.57:0,25,378	1/1:14,8:22:29.93:429,30,0	0/0:22,0:22:17.61:0,18,62	0/0:23,1:23:0.34:0,0,36	0/1:0,14:14:0:0,0,0	0/0:21,1:21:15.49:0,15,486	0/1:15,0:14:29.40:29,0,52	0/0:2,0:2:2.50:0,2,9
chr10	88446030	.	GCACACA	G	1944.57	PASS	AB=0.978;AC=15;AF=0.288;AN=52;BaseQRankSum=8.421;DP=624;FS=22.142;HRun=0;HaplotypeScore=186.9371;InbreedingCoeff=0.2844;MQ=50.73;MQ0=22;MQRankSum=-4.311;QD=7.57;ReadPosRankSum=0.893;VQSLOD=1.0687;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:31:69.24:0,69,2470	0/0:11,0:11:27.09:0,27,940	0/0:18,0:13:35.81:0,36,1068	0/0:26,0:14:36.08:0,36,939	./.	0/1:18,0:18:0:0,0,0	0/0:25,0:24:2.63:0,3,13	0/0:27,0:27:81.26:0,81,2271	0/0:18,0:18:48.16:0,48,1581	0/0:19,0:14:42.14:0,42,1541	0/0:11,0:10:22.36:0,22,870	0/0:18,0:17:3.01:0,3,40	1/1:18,4:21:40.95:553,41,0	0/0:16,0:16:3.01:0,3,43	0/1:29,1:29:34.22:37,0,34	1/1:28,5:33:2.03:390,2,0	0/0:32,0:30:83.31:0,83,2579	0/1:25,0:23:72.65:73,0,97	0/1:21,0:18:58.74:402,0,59	0/1:21,1:22:11:70,0,11	0/0:56,0:52:30.05:0,30,879	1/1:21,0:21:24.12:177,24,0	0/1:21,1:22:15.52:87,0,16	0/1:26,1:25:19.22:41,0,19	./.	0/0:22,0:21:59.23:0,59,1835	1/1:12,4:15:25.05:276,25,0	0/0:2,0:2:3.01:0,3,75
chr10	88446036	.	A	ACATG	4253.31	PASS	AB=0.778;AC=16;AF=0.286;AN=56;BaseQRankSum=-2.368;DP=654;FS=28.472;HRun=0;HaplotypeScore=172.2304;InbreedingCoeff=0.7607;MQ=53.05;MQ0=14;MQRankSum=-4.788;QD=19.60;ReadPosRankSum=-0.515;VQSLOD=2.5565;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:84.29:0,84,1659	0/0:11,0:11:27.09:0,27,565	0/0:23,0:18:48.14:0,48,881	0/0:29,0:17:47.19:0,47,835	0/0:20,0:20:6.02:0,6,85	0/0:19,0:19:6.02:0,6,86	0/0:28,0:28:15.05:0,15,207	0/0:31,0:31:87.27:0,87,1659	0/0:19,0:18:48.16:0,48,980	0/0:18,0:14:42.14:0,42,881	0/0:11,0:11:33.06:0,33,590	0/1:18,0:17:0:0,0,0	1/1:6,14:21:27.81:766,28,0	0/0:19,0:19:12.04:0,12,172	1/1:3,26:33:8.57:260,9,0	1/1:5,26:33:30.04:827,30,0	0/0:31,0:30:84.27:0,84,1636	0/0:24,0:25:31.52:0,32,397	1/1:3,16:18:44.24:1130,44,0	1/1:1,19:23:8.99:259,9,0	0/0:56,0:52:36.08:0,36,675	0/0:19,0:19:25.06:0,25,318	1/1:4,17:22:8.43:259,8,0	0/1:5,24:28:13.13:161,0,13	0/0:15,0:15:3.01:0,3,43	0/0:20,0:21:63.20:0,63,1240	1/1:5,8:18:23.81:590,24,0	0/0:2,0:2:3.01:0,3,63
chr10	88446721	.	T	TTGTGTGTG	8352.25	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=5.789;DP=733;FS=11.633;HRun=0;HaplotypeScore=218.0112;InbreedingCoeff=0.7866;MQ=62.11;MQ0=11;MQRankSum=-6.880;QD=16.22;ReadPosRankSum=-4.832;VQSLOD=1.9989;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:40:15.36:0,15,1076	0/0:15,0:15:18.04:0,18,372	0/0:37,0:19:6.02:0,6,116	0/0:34,0:18:3.84:0,4,96	1/1:14,0:14:3.01:98,3,0	1/1:16,7:23:15.05:595,15,0	1/1:20,9:30:2.98:124,3,0	1/1:28,0:27:30.06:535,30,0	0/0:23,0:25:54.17:0,54,1248	0/0:26,0:26:13.84:0,14,796	0/0:16,0:18:24.02:0,24,382	1/1:15,0:22:9.03:223,9,0	1/1:19,0:28:18.94:531,19,0	1/1:25,7:34:20.96:779,21,0	1/1:27,0:41:27.65:867,28,0	1/1:16,0:22:17.84:611,18,0	0/0:23,0:23:14.13:0,14,704	1/1:8,0:12:9.01:199,9,0	1/1:18,1:23:24.07:584,24,0	1/1:26,0:35:5.48:185,5,0	1/1:28,0:33:3.36:64,3,0	1/1:16,8:27:14.80:467,15,0	1/1:19,0:25:11.93:343,12,0	1/1:23,0:24:17.81:396,18,0	1/1:16,0:20:9.03:183,9,0	1/1:14,0:30:45.09:855,45,0	1/1:16,0:22:17.86:584,18,0	1/1:2,0:6:6.02:129,6,0
chr10	88446853	.	AGTGTGT	A	1794.78	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=3.267;DP=633;FS=6.242;HRun=0;HaplotypeScore=143.1151;InbreedingCoeff=0.8029;MQ=60.14;MQ0=11;MQRankSum=-7.517;QD=12.13;ReadPosRankSum=-0.685;VQSLOD=2.5140;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:44:75.25:0,75,2100	0/0:5,0:5:3.01:0,3,95	0/0:37,0:25:9.03:0,9,200	0/0:30,0:15:3.48:0,3,99	1/1:15,9:24:17.09:251,17,0	1/1:11,7:19:12.04:214,12,0	1/1:16,6:23:12.04:226,12,0	0/0:26,0:26:11.83:0,12,127	0/0:12,0:26:35.93:0,36,1004	0/0:25,0:24:39.13:0,39,949	0/0:9,0:12:15.05:0,15,420	1/1:11,9:21:23.57:452,24,0	0/0:8,0:18:12.04:0,12,308	1/1:9,5:14:15.05:306,15,0	0/0:11,0:29:39.13:0,39,1012	0/0:13,0:26:24.55:0,25,589	0/0:37,0:39:90.31:0,90,2606	1/1:17,4:22:14.73:246,15,0	0/0:10,0:14:18.05:0,18,452	0/0:13,0:13:6.02:0,6,178	0/0:21,0:30:24.08:0,24,319	1/1:20,3:23:15.05:286,15,0	0/0:14,0:18:8.22:0,8,158	0/0:10,0:26:29.95:0,30,785	0/0:20,0:24:28.22:0,28,830	0/0:11,0:13:2.10:0,2,33	0/0:14,0:22:8.62:0,9,268	0/0:1,0:4:5.15:0,5,75
chr10	88447227	.	A	ATCAG	24349.78	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-1.820;DP=776;FS=1.611;HRun=0;HaplotypeScore=179.9436;InbreedingCoeff=0.9832;MQ=80.79;MQ0=3;MQRankSum=-12.886;QD=58.96;ReadPosRankSum=3.163;VQSLOD=6.2699;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,2606	0/0:7,0:7:15.05:0,15,276	0/0:30,0:27:62.45:0,62,912	0/0:47,0:38:28.67:0,29,1099	1/1:3,22:24:51.17:1331,51,0	1/1:6,15:21:51.17:1330,51,0	1/1:12,23:37:69.24:1817,69,0	0/0:26,0:26:75.25:0,75,1339	0/0:26,0:26:66.23:0,66,1190	0/0:25,0:25:72.23:0,72,1269	0/0:13,0:13:33.11:0,33,607	1/1:2,25:27:72.25:1898,72,0	1/1:14,25:39:78.27:2018,78,0	1/1:7,27:34:78.27:2050,78,0	1/1:8,21:29:60.21:1579,60,0	1/1:3,34:37:99:2687,102,0	0/0:35,0:35:99:0,99,1808	1/1:3,12:15:33.11:861,33,0	1/1:7,6:14:30.10:762,30,0	1/1:4,17:21:51.18:1341,51,0	0/0:41,0:41:99:0,123,2231	1/1:6,23:28:63.22:1646,63,0	1/1:6,19:25:54.19:1420,54,0	1/1:2,17:19:48.16:1262,48,0	0/0:36,0:36:99:0,105,1901	0/0:23,0:23:66.23:0,66,1210	1/1:7,33:41:90.31:2348,90,0	0/0:2,0:2:6.02:0,6,110
chr10	88447243	.	GTGAAC	G	6280.50	PASS	AB=0.971;AC=18;AF=0.321;AN=56;BaseQRankSum=11.075;DP=831;FS=1.684;HRun=0;HaplotypeScore=274.5901;InbreedingCoeff=0.8349;MQ=82.44;MQ0=6;MQRankSum=-13.073;QD=22.76;ReadPosRankSum=1.902;VQSLOD=3.9876;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,120,3412	0/0:8,0:8:24.08:0,24,640	0/1:48,0:37:2.26:2,0,720	0/0:77,0:56:33.41:0,33,1025	0/0:31,0:30:48.16:0,48,1315	0/0:18,0:18:30.10:0,30,852	0/0:32,0:32:51:0,51,1186	0/0:28,0:28:45.13:0,45,1043	0/0:9,0:31:57.18:0,57,1205	0/0:26,1:27:4.90:0,5,1521	0/1:15,1:16:19.17:19,0,902	0/0:31,0:31:63.22:0,63,1751	1/1:16,19:35:57.20:1050,57,0	0/0:32,0:32:84.29:0,84,2289	1/1:8,21:29:54.19:995,54,0	1/1:14,21:35:66.21:1185,66,0	0/0:40,0:40:87.29:0,87,2338	0/0:15,0:15:30.10:0,30,847	1/1:9,6:14:18.06:323,18,0	1/1:6,16:22:30.10:553,30,0	0/0:40,0:40:84.29:0,84,2388	0/0:28,0:28:72.25:0,72,1956	1/1:9,13:23:36.12:663,36,0	1/1:11,8:19:17.19:330,17,0	0/0:29,0:29:57.20:0,57,1621	0/0:27,0:27:66.22:0,66,1806	1/1:11,23:34:63.22:1161,63,0	0/0:4,0:4:9.03:0,9,240
chr10	88447923	.	G	GAT	3516.74	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=12.510;DP=598;FS=5.139;HRun=0;HaplotypeScore=176.0999;InbreedingCoeff=0.9676;MQ=66.36;MQ0=11;MQRankSum=-3.186;QD=11.57;ReadPosRankSum=2.661;VQSLOD=2.9066;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:77.92:0,78,762	0/0:12,0:11:14.47:0,14,261	0/0:37,0:30:80.76:0,81,750	0/0:46,0:25:62.26:0,62,606	1/1:22,0:22:23.94:192,24,0	1/1:23,1:24:32.91:263,33,0	1/1:19,0:19:26.87:210,27,0	0/0:25,0:23:50.46:0,50,471	0/0:21,0:21:38.77:0,39,308	0/0:24,0:21:56.83:0,57,582	0/0:13,0:13:32.85:0,33,320	1/1:10,0:10:14.93:118,15,0	1/1:17,0:17:38.68:311,39,0	1/1:26,0:26:38.80:302,39,0	1/1:23,0:23:26.47:229,26,0	1/1:23,0:22:44.73:366,45,0	0/0:20,0:20:53.98:0,54,537	1/1:11,0:11:32.67:228,33,0	1/1:24,0:23:50.20:397,50,0	1/1:17,0:17:14.96:121,15,0	0/0:28,0:25:23.87:0,24,185	1/1:19,0:19:15.72:142,16,0	1/1:16,0:15:14.96:119,15,0	1/1:15,0:15:12:117,12,0	1/1:2,14:16:5.97:73,6,0	0/0:24,0:24:64.10:0,64,540	1/1:22,0:22:46.33:329,46,0	0/0:7,0:7:17.97:0,18,158
chr10	88447924	.	ATGTGTG	A	232.20	PASS	AB=1.000;AC=4;AF=0.074;AN=54;BaseQRankSum=3.186;DP=602;FS=2.440;HRun=0;HaplotypeScore=215.3324;InbreedingCoeff=0.2086;MQ=65.29;MQ0=12;MQRankSum=-2.723;QD=3.63;ReadPosRankSum=-0.452;VQSLOD=2.7160;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:45.15:0,45,1286	0/0:12,0:11:11.78:0,12,277	0/0:35,0:29:6.01:0,6,88	0/0:48,0:26:17.73:0,18,323	0/0:22,0:22:5.88:0,6,85	0/0:24,0:24:2.97:0,3,20	0/0:19,0:19:3.01:0,3,50	0/0:25,0:23:15.05:0,15,410	1/1:13,7:21:17.74:319,18,0	0/0:22,0:19:18.06:0,18,581	0/0:13,0:13:21.07:0,21,593	0/0:10,0:10:9.01:0,9,159	0/0:17,0:17:12.94:0,13,198	0/0:26,0:26:1.28:0,1,157	0/0:23,0:23:6.02:0,6,102	0/1:24,0:23:1.88:2,0,69	0/0:20,0:21:39.10:0,39,889	0/0:11,0:11:18.06:0,18,490	0/0:26,0:25:4.11:0,4,129	0/0:17,0:17:6.47:0,6,87	./.	0/1:19,0:19:7.63:8,0,26	0/0:17,0:16:5.85:0,6,113	0/0:16,0:16:11.90:0,12,155	0/0:16,0:16:6.02:0,6,120	0/0:24,0:23:4.78:0,5,55	0/0:21,0:21:11.89:0,12,335	0/0:7,0:7:1.55:0,2,4
chr10	88447945	.	T	TC	206.11	PASS	AB=0.807;AC=4;AF=0.071;AN=56;BaseQRankSum=3.778;DP=561;FS=4.013;HRun=0;HaplotypeScore=158.9057;InbreedingCoeff=-0.0886;MQ=43.69;MQ0=28;MQRankSum=-0.495;QD=2.32;ReadPosRankSum=0.207;VQSLOD=3.0674;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:84.21:0,84,1141	0/0:14,0:13:36.10:0,36,465	0/1:45,0:13:0.84:1,0,319	0/0:86,0:25:63.16:0,63,836	0/0:17,0:17:15.05:0,15,207	0/0:16,0:16:18.06:0,18,230	0/0:8,0:8:2.72:0,3,41	0/0:18,0:16:42.13:0,42,546	0/0:22,0:22:38.10:0,38,389	0/0:15,0:12:36.12:0,36,500	0/0:17,0:16:38.85:0,39,540	0/0:7,0:7:9.03:0,9,125	0/0:12,0:11:24.06:0,24,295	0/0:19,0:19:21.96:0,22,294	0/0:16,0:15:15.03:0,15,188	0/0:21,0:20:33.11:0,33,445	0/0:28,0:28:66.10:0,66,840	0/0:9,0:9:27.09:0,27,365	0/0:20,0:20:54.43:0,54,668	0/0:12,0:12:9.50:0,10,120	0/1:22,4:23:34.13:34,0,106	0/0:15,0:15:13.59:0,14,170	0/0:17,0:16:11.97:0,12,149	0/0:15,0:15:11.86:0,12,166	0/0:14,0:14:6.02:0,6,79	0/1:9,7:15:99:232,0,145	0/0:17,0:17:36.09:0,36,460	0/1:1,1:2:38.92:39,0,40
chr10	88447961	.	TGTCATGG	T	972.35	PASS	AB=0.818;AC=20;AF=0.370;AN=54;BaseQRankSum=6.663;DP=492;FS=3.898;HRun=0;HaplotypeScore=162.5536;InbreedingCoeff=0.4476;MQ=48.64;MQ0=27;MQRankSum=-2.655;QD=7.54;ReadPosRankSum=0.749;VQSLOD=2.3001;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:74.04:0,74,2175	0/0:9,0:9:1.31:0,1,503	0/0:57,0:17:42.51:0,43,1000	0/0:92,0:26:50.48:0,50,1317	0/1:11,0:11:0:1,0,0	1/1:9,0:9:3.01:51,3,0	1/1:7,0:7:0.47:1,0,0	0/0:25,0:23:68.95:0,69,1611	0/0:13,0:13:10.79:0,11,291	0/0:14,0:12:33.99:0,34,836	0/0:14,0:13:24.08:0,24,726	0/0:6,0:6:2.99:0,3,24	0/1:6,1:8:14.07:162,0,14	0/0:14,0:14:5.98:0,6,46	1/1:6,4:13:6.01:72,6,0	1/1:11,3:15:9.01:149,9,0	0/0:24,0:24:59.45:0,59,1538	0/1:6,0:8:16.71:17,0,100	1/1:2,3:6:15.90:296,16,0	1/1:5,5:10:1.65:53,2,0	0/0:26,0:26:11.82:0,12,335	./.	0/0:3,1:9:2.50:0,2,18	1/1:10,1:14:2.95:42,3,0	1/1:5,0:5:1.55:4,2,0	0/0:16,0:15:42.14:0,42,1069	0/1:11,6:15:5.08:280,0,5	0/0:2,0:2:6.02:0,6,174
chr10	88447962	.	GTCATGGA	G	866	PASS	AB=0.900;AC=25;AF=0.500;AN=50;BaseQRankSum=5.882;DP=487;FS=9.136;HRun=0;HaplotypeScore=161.1720;InbreedingCoeff=0.6112;MQ=48.55;MQ0=26;MQRankSum=-4.113;QD=6.01;ReadPosRankSum=0.305;VQSLOD=1.8699;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:68.90:0,69,2257	0/1:8,0:9:15.69:16,0,526	0/0:57,0:17:42.18:0,42,1013	0/0:95,0:27:66.80:0,67,1392	0/1:11,0:11:0:1,0,0	1/1:9,0:9:3.01:68,3,0	1/1:7,0:7:0.47:1,0,0	0/0:24,0:23:52.29:0,52,1674	0/0:14,0:14:14.21:0,14,547	0/0:15,0:13:32.35:0,32,942	0/0:12,0:11:24.96:0,25,756	./.	1/1:6,3:8:9.03:190,9,0	./.	1/1:10,4:13:2.98:22,3,0	1/1:10,7:15:6.02:117,6,0	0/0:24,0:24:53.68:0,54,1661	1/1:8,0:8:2.70:30,3,0	1/1:5,1:6:16.84:265,17,0	1/1:7,3:10:1.65:41,2,0	0/0:25,1:26:11.82:0,12,361	./.	0/1:6,2:8:0:0,0,0	1/1:10,3:13:2.89:19,3,0	1/1:5,0:5:3.01:30,3,0	0/0:16,0:15:42.13:0,42,1187	1/1:12,5:14:12.04:229,12,0	0/0:2,0:2:6.02:0,6,176
chr10	88447967	.	GGA	G	315.07	PASS	AB=0.972;AC=19;AF=0.432;AN=44;BaseQRankSum=6.720;DP=412;FS=11.940;HRun=0;HaplotypeScore=127.4745;InbreedingCoeff=0.6653;MQ=51.87;MQ0=25;MQRankSum=-4.184;QD=3.21;ReadPosRankSum=0.762;VQSLOD=2.1456;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:54.62:0,55,1321	0/1:10,1:11:5.51:6,0,478	0/0:63,1:21:53.85:0,54,909	0/0:104,1:30:22.65:0,23,1071	./.	1/1:0,1:1:2.94:18,3,0	./.	0/0:20,0:20:60.21:0,60,1155	0/0:13,0:13:29.67:0,30,509	0/0:9,0:9:27.05:0,27,480	0/0:13,0:12:24.88:0,25,470	./.	1/1:7,1:7:8.87:73,9,0	./.	1/1:10,2:11:0.44:0,0,0	1/1:13,2:13:6.01:63,6,0	0/0:19,0:19:50.14:0,50,879	1/1:0,0:2:3:27,3,0	1/1:5,0:5:14.98:126,15,0	1/1:9,2:10:3:25,3,0	0/0:24,0:24:11.24:0,11,214	./.	0/1:8,0:8:0:0,0,0	0/1:11,0:11:0:0,0,0	./.	0/0:14,0:14:40.68:0,41,566	1/1:13,1:11:12.02:123,12,0	0/0:2,0:2:6.02:0,6,75
chr10	88447973	.	TTG	T	1045.63	PASS	AB=0.889;AC=13;AF=0.295;AN=44;BaseQRankSum=0.580;DP=454;FS=4.774;HRun=0;HaplotypeScore=130.6376;InbreedingCoeff=0.5902;MQ=50.57;MQ0=28;MQRankSum=0.293;QD=11.01;ReadPosRankSum=0.589;VQSLOD=3.4377;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:30:57.15:0,57,881	0/0:11,0:11:27.09:0,27,459	0/0:75,0:23:43.91:0,44,663	0/0:110,1:30:46.19:0,46,679	0/1:4,0:4:0.01:0,0,0	0/0:1,0:1:2.22:0,2,7	./.	1/1:6,19:25:44.97:638,45,0	0/0:14,0:14:27.05:0,27,372	0/0:11,0:11:30.09:0,30,485	0/0:13,0:13:24.08:0,24,396	./.	0/0:11,0:10:5.95:0,6,22	./.	1/1:14,0:13:0.44:0,0,0	0/0:19,0:16:0.47:0,0,1	0/0:19,0:19:30.49:0,30,764	1/1:2,0:2:1.82:5,2,0	0/0:5,0:5:7.39:0,7,38	0/0:12,0:11:2.60:0,3,10	1/1:9,13:23:11.77:138,12,0	./.	./.	0/1:13,0:13:0.01:0,0,0	./.	1/1:4,8:12:29.95:364,30,0	0/0:15,0:12:5.74:0,6,19	0/1:1,1:2:10.97:32,0,11
chr10	88447983	.	GTCATGGA	G	670.09	PASS	AB=0.722;AC=16;AF=0.348;AN=46;BaseQRankSum=6.639;DP=436;FS=4.340;HRun=0;HaplotypeScore=149.1760;InbreedingCoeff=0.6729;MQ=50.42;MQ0=30;MQRankSum=-5.238;QD=7.70;ReadPosRankSum=-3.660;VQSLOD=1.5767;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:57.20:0,57,2063	0/0:11,0:11:30.10:0,30,996	0/0:75,0:20:53.16:0,53,1484	0/0:98,0:24:46.95:0,47,1110	0/1:0,5:5:0:0,0,0	./.	1/1:1,1:2:0.47:1,0,0	0/0:22,0:22:21.44:0,21,1335	0/0:16,0:16:30.10:0,30,966	0/0:12,0:12:33.11:0,33,1012	0/0:12,0:12:21.07:0,21,771	./.	1/1:6,3:8:11.25:179,11,0	./.	0/1:6,7:13:0:0,0,0	1/1:9,9:15:11.53:234,12,0	0/0:22,0:22:40.59:0,41,1950	0/1:3,0:3:6.69:16,0,7	1/1:1,3:4:11.87:212,12,0	1/1:4,6:10:2.60:11,3,0	0/0:23,0:22:14.88:0,15,274	./.	0/1:4,2:6:0:0,0,0	0/0:8,4:12:0.94:0,1,2	./.	0/0:13,0:13:24.59:0,25,643	1/1:6,9:12:10.46:159,10,0	0/0:3,0:3:5.69:0,6,61
chr10	88447988	.	GGA	G	402.52	PASS	AB=0.984;AC=23;AF=0.460;AN=50;BaseQRankSum=5.989;DP=398;FS=6.203;HRun=0;HaplotypeScore=105.1713;InbreedingCoeff=0.4906;MQ=52.10;MQ0=20;MQRankSum=-1.032;QD=3.22;ReadPosRankSum=-4.811;VQSLOD=-0.0213;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:56.47:0,56,844	0/0:11,0:11:33.02:0,33,529	0/0:64,0:20:45.92:0,46,695	0/0:79,2:20:12.32:0,12,502	0/1:5,0:5:0.01:0,0,0	1/1:1,0:1:3.01:35,3,0	./.	0/0:22,0:22:60.31:0,60,1000	0/0:15,0:14:25.85:0,26,377	0/0:12,0:12:33.08:0,33,573	0/0:11,0:11:20.84:0,21,393	1/1:0,1:1:3.01:33,3,0	1/1:6,0:6:2.88:47,3,0	./.	1/1:9,2:11:3.43:24,3,0	1/1:15,1:13:11.57:95,12,0	0/0:21,0:21:37.30:0,37,769	0/1:5,0:5:12.54:13,0,29	1/1:4,0:4:12:111,12,0	0/1:7,1:7:0:0,0,0	0/1:25,0:24:14.38:14,0,180	./.	0/1:2,0:2:0:0,0,0	0/1:9,0:9:0.14:0,0,0	1/1:1,0:2:5.38:40,5,0	0/1:16,0:17:70.01:70,0,422	1/1:12,0:9:8.76:77,9,0	0/0:4,0:4:9:0,9,86
chr10	88448006	.	G	GTA	465.83	PASS	AB=1.000;AC=12;AF=0.222;AN=54;BaseQRankSum=1.414;DP=490;FS=0.635;HRun=0;HaplotypeScore=120.4939;InbreedingCoeff=0.3010;MQ=50.16;MQ0=20;MQRankSum=-0.425;QD=3.30;ReadPosRankSum=0.269;VQSLOD=2.4047;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:65.32:0,65,653	0/0:9,0:9:27.02:0,27,322	0/0:56,0:13:29.92:0,30,253	0/0:61,0:18:23.53:0,24,287	0/0:7,0:7:2.22:0,2,8	1/1:14,0:14:4.42:161,4,0	0/1:16,0:16:11.35:59,0,11	0/0:22,0:22:43.57:0,44,455	0/0:20,0:19:41.79:0,42,407	0/0:19,0:19:45.85:0,46,481	0/0:12,0:12:23.89:0,24,257	0/1:16,0:16:0.05:130,0,0	0/0:10,0:10:17.12:0,17,111	1/1:10,4:15:5.82:38,6,0	0/0:12,0:11:9.81:0,10,67	0/1:15,0:13:2.62:3,0,61	0/0:25,0:25:66.50:0,67,698	1/1:12,0:12:15.32:170,15,0	0/0:9,0:8:8:0,8,105	0/0:5,0:4:2.92:0,3,17	0/1:26,0:23:9.73:10,0,38	./.	0/0:4,0:4:2.99:0,3,24	0/0:15,0:15:14.27:0,14,119	0/1:8,0:8:3.78:4,0,54	0/1:19,0:19:34.62:35,0,197	0/0:13,0:10:9.01:0,9,117	0/0:8,0:8:1.11:0,1,57
chr10	88448503	.	CA	C	582.60	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.394;DP=681;FS=0.000;HRun=4;HaplotypeScore=79.4004;InbreedingCoeff=0.9684;MQ=84.90;MQ0=0;MQRankSum=-1.992;QD=25.33;ReadPosRankSum=0.756;VQSLOD=2.2978;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1637	0/0:4,0:4:12.04:0,12,168	0/0:23,0:23:41.33:0,41,865	0/0:24,0:24:56.84:0,57,771	0/0:21,0:21:51.17:0,51,714	0/0:18,0:18:51.16:0,51,695	0/0:29,0:29:75.21:0,75,998	0/0:27,0:25:72.24:0,72,1009	0/0:19,0:19:54.18:0,54,756	0/0:26,0:26:78.25:0,78,1076	0/0:18,0:18:51.13:0,51,691	0/0:21,0:21:63.20:0,63,867	0/0:32,0:32:93.31:0,93,1302	0/0:26,0:26:75.24:0,75,1033	0/0:32,0:32:90.29:0,90,1243	0/0:30,0:30:87.29:0,87,1218	0/0:31,0:31:87.26:0,87,1196	0/0:18,0:18:54.16:0,54,738	0/0:12,0:12:36.12:0,36,491	0/0:22,0:22:60.20:0,60,839	0/0:41,0:41:99:0,120,1680	0/0:19,0:19:51.17:0,51,714	0/0:21,0:21:60.19:0,60,825	0/0:27,0:27:78.26:0,78,1088	1/1:3,20:23:53.78:677,54,0	0/0:28,0:28:84.27:0,84,1159	0/0:40,0:40:99:0,117,1603	0/0:9,0:9:24.55:0,25,337
chr10	88448724	.	T	TA	642.24	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.788;DP=597;FS=2.846;HRun=2;HaplotypeScore=74.4976;InbreedingCoeff=0.9974;MQ=84.36;MQ0=0;MQRankSum=-3.966;QD=25.69;ReadPosRankSum=0.349;VQSLOD=3.3997;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.31:0,96,1244	0/0:8,0:8:24.08:0,24,312	0/0:25,0:24:69.10:0,69,839	0/0:20,0:20:54.13:0,54,657	0/0:31,0:31:93.26:0,93,1176	0/0:21,0:21:63.20:0,63,817	0/0:16,0:16:42.14:0,42,545	0/0:55,0:55:99:0,153,1974	0/0:12,0:12:33.11:0,33,428	0/0:18,0:18:51.17:0,51,662	0/0:19,0:19:54.18:0,54,701	0/0:16,0:16:42.12:0,42,531	0/0:14,0:14:42.14:0,42,544	0/0:12,0:12:36.12:0,36,468	0/0:28,0:28:81.25:0,81,1037	0/0:15,0:15:42.14:0,42,545	0/0:23,0:23:63.20:0,63,817	0/0:18,0:18:54.18:0,54,701	0/0:22,0:22:66.20:0,66,832	0/0:26,0:26:78.25:0,78,1013	0/0:17,0:17:51.17:0,51,662	0/0:14,0:14:42.14:0,42,545	0/0:20,0:20:57.18:0,57,738	0/0:14,0:14:39.13:0,39,502	1/1:3,22:25:71.53:737,72,0	0/0:19,0:19:54.18:0,54,701	0/0:35,0:35:99:0,99,1285	0/0:20,0:20:60.14:0,60,730
chr10	88448726	.	TCA	T	718.77	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.529;DP=585;FS=2.891;HRun=0;HaplotypeScore=84.3518;InbreedingCoeff=0.9974;MQ=82.55;MQ0=0;MQRankSum=-4.297;QD=29.95;ReadPosRankSum=0.768;VQSLOD=5.4372;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.33:0,96,1876	0/0:8,0:8:24.08:0,24,479	0/0:22,0:21:63.10:0,63,1132	0/0:20,0:20:57.15:0,57,1044	0/0:31,0:31:90.31:0,90,1798	0/0:21,0:21:63.22:0,63,1259	0/0:16,0:16:45.15:0,45,877	0/0:54,0:54:99:0,157,3036	0/0:11,0:11:33.11:0,33,647	0/0:18,0:18:54.18:0,54,1032	0/0:19,0:19:57.20:0,57,1109	0/0:14,0:14:42.14:0,42,829	0/0:14,0:14:42.13:0,42,793	0/0:12,0:12:36.12:0,36,708	0/0:28,0:28:81.28:0,81,1587	0/0:14,0:14:42.14:0,42,829	0/0:23,0:23:66.23:0,66,1303	0/0:18,0:18:54.17:0,54,1043	0/0:21,0:21:63.22:0,63,1239	0/0:28,0:28:84.29:0,84,1636	0/0:17,0:17:51.17:0,51,1007	0/0:14,0:14:42.14:0,42,828	0/0:20,0:20:57.20:0,57,1129	0/0:15,0:15:45.15:0,45,859	1/1:2,22:24:69.16:814,69,0	0/0:19,0:19:57.20:0,57,1134	0/0:34,0:34:99:0,99,1977	0/0:17,0:17:51.15:0,51,981
chr10	88448804	.	TTC	T	2127.66	PASS	AB=0.614;AC=29;AF=0.518;AN=56;BaseQRankSum=4.467;DP=547;FS=3.228;HRun=0;HaplotypeScore=122.4127;InbreedingCoeff=0.7966;MQ=60.84;MQ0=7;MQRankSum=-2.284;QD=7.77;ReadPosRankSum=3.199;VQSLOD=3.0940;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:15.03:0,15,168	0/0:6,0:6:8.98:0,9,83	0/0:26,0:20:2.88:0,3,15	0/0:28,0:13:2.98:0,3,22	1/1:31,0:32:36.93:181,37,0	1/1:25,0:25:25.57:125,26,0	1/1:12,0:12:8.36:39,8,0	0/0:33,0:33:11.92:0,12,125	0/0:13,0:21:12:0,12,104	0/0:16,0:22:28.19:0,28,237	0/0:15,0:20:5.68:0,6,38	1/1:13,0:13:19.89:97,20,0	1/1:6,9:16:29.75:294,30,0	1/1:11,0:13:25.57:125,26,0	1/1:9,7:21:38.25:326,38,0	1/1:6,2:11:20.54:166,21,0	0/0:8,0:14:11.87:0,12,93	1/1:5,0:5:8.52:42,9,0	1/1:23,3:25:9.02:98,9,0	1/1:15,10:26:17.71:161,18,0	0/0:10,0:9:12.01:0,12,115	1/1:10,0:10:14.20:70,14,0	1/1:11,10:22:17.49:180,17,0	1/1:4,0:13:19.89:98,20,0	0/0:26,0:26:3.01:0,3,37	0/0:17,0:27:50.71:0,51,478	0/1:10,14:27:3.68:334,0,4	0/0:11,0:12:11.99:0,12,111
chr10	88448806	.	CT	C	222.30	PASS	AB=0.700;AC=9;AF=0.161;AN=56;BaseQRankSum=10.574;DP=548;FS=0.000;HRun=2;HaplotypeScore=120.8198;InbreedingCoeff=0.2622;MQ=58.76;MQ0=8;MQRankSum=-9.295;QD=2.04;ReadPosRankSum=3.669;VQSLOD=-0.5884;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:29.78:0,30,372	0/0:6,0:6:18.06:0,18,240	0/0:25,0:18:49.66:0,50,630	0/0:30,0:13:33.11:0,33,425	0/1:18,14:32:65.79:66,0,88	0/1:15,9:24:51.84:52,0,106	0/1:9,3:12:43.21:44,0,43	0/0:31,0:31:81.22:0,81,1019	0/0:22,0:21:30.08:0,30,344	0/0:23,0:22:64.74:0,65,789	0/0:21,0:21:26.04:0,26,285	0/1:6,7:13:33.59:46,0,34	0/0:18,0:17:33.04:0,33,240	1/1:3,9:13:10.10:79,10,0	0/0:21,0:21:42.64:0,43,289	0/0:11,0:11:21.93:0,22,156	0/0:14,0:14:18.04:0,18,201	0/1:2,3:5:20.10:31,0,20	0/0:26,0:25:57.67:0,58,758	0/0:28,0:27:59.10:0,59,641	0/0:10,0:9:24.06:0,24,298	1/1:2,8:10:4.18:47,4,0	0/0:23,0:23:44.60:0,45,438	0/0:13,0:13:14.74:0,15,96	0/0:25,0:25:38.87:0,39,503	0/0:27,0:27:75.95:0,76,1002	0/0:26,0:27:48.78:0,49,356	0/0:12,0:12:36.11:0,36,468
chr10	88448808	.	CTCTCTCTCT	C	3166.34	PASS	AB=0.744;AC=10;AF=0.179;AN=56;BaseQRankSum=11.015;DP=555;FS=0.520;HRun=0;HaplotypeScore=178.8356;InbreedingCoeff=0.2894;MQ=57.51;MQ0=9;MQRankSum=-9.859;QD=26.83;ReadPosRankSum=5.944;VQSLOD=2.9551;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:32.85:0,33,1057	0/0:6,0:6:18.06:0,18,536	0/0:27,0:19:52.01:0,52,976	0/0:32,0:12:33.10:0,33,597	0/1:18,10:32:99:726,0,127	0/1:13,8:22:86.98:558,0,87	0/1:8,3:11:99:190,0,113	0/0:32,0:32:87.89:0,88,1807	0/0:22,0:21:33.09:0,33,911	0/0:23,0:22:66.22:0,66,1947	0/0:20,0:20:23.96:0,24,460	0/1:6,7:13:27.02:441,0,27	0/0:19,0:18:50.91:0,51,1215	1/1:4,8:13:14.03:561,14,0	0/0:21,0:21:56.91:0,57,1244	0/0:13,0:13:35.86:0,36,842	0/0:14,0:14:20.94:0,21,588	0/1:2,3:5:6.65:202,0,7	0/0:26,0:25:75.25:0,75,1412	0/0:31,0:30:74.97:0,75,1796	0/0:10,0:9:24.08:0,24,847	1/1:2,7:10:17.55:333,18,0	0/0:22,0:22:51.64:0,52,1403	0/1:12,0:12:49.24:309,0,49	0/0:25,0:25:38.95:0,39,801	0/0:27,0:27:78.26:0,78,2795	0/0:28,0:28:38.12:0,38,1788	0/0:12,0:12:36.08:0,36,953
chr10	88449822	.	C	CTTTTT	6565.78	PASS	AB=0.686;AC=18;AF=0.321;AN=56;BaseQRankSum=3.091;DP=683;FS=59.134;HRun=2;HaplotypeScore=233.6576;InbreedingCoeff=0.0449;MQ=61.29;MQ0=9;MQRankSum=-6.162;QD=24.32;ReadPosRankSum=2.010;VQSLOD=-0.2215;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,101,2102	0/0:13,0:13:33.61:0,34,621	0/0:36,0:22:55.65:0,56,831	0/0:66,0:30:32.42:0,32,625	0/1:4,12:17:40.92:154,0,41	0/1:5,11:18:96.66:97,0,109	0/1:5,11:20:78.80:79,0,141	0/0:39,0:38:99:0,107,1862	0/0:22,0:22:64.84:0,65,1266	0/0:31,0:31:90.07:0,90,1685	0/0:17,0:17:26.30:0,26,491	0/1:3,7:10:70.21:84,0,70	0/1:11,12:25:45.72:46,0,113	1/1:17,0:16:10.07:821,10,0	0/1:19,0:19:49.04:678,0,49	1/1:28,0:28:76.09:1565,76,0	0/0:17,0:17:42.14:0,42,927	1/1:17,0:17:20.80:485,21,0	0/1:4,9:19:44.22:900,0,44	0/1:4,9:14:19.87:193,0,20	0/0:49,0:48:99:0,117,2483	0/1:6,11:18:85.68:97,0,86	0/1:15,0:15:13.47:606,0,13	0/1:2,9:12:3.77:86,0,4	0/0:26,0:23:65.46:0,65,1047	0/0:39,0:39:88.93:0,89,2089	0/1:17,0:17:34.64:674,0,35	0/0:19,0:19:44.44:0,44,868
chr10	88449845	.	T	TCTCATC	2835.95	PASS	AB=0.949;AC=22;AF=0.393;AN=56;BaseQRankSum=8.838;DP=496;FS=74.920;HRun=0;HaplotypeScore=233.8799;InbreedingCoeff=-0.5230;MQ=64.41;MQ0=7;MQRankSum=-4.922;QD=10.06;ReadPosRankSum=4.973;VQSLOD=0.1942;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:19.33:0,19,1340	0/1:8,1:9:99:132,0,308	0/0:40,0:19:37.46:0,37,532	0/0:67,0:22:16.81:0,17,394	0/1:9,0:9:19.79:89,0,20	0/1:11,0:10:39.30:39,0,157	0/1:14,0:14:11.85:12,0,193	0/1:11,6:17:99:624,0,681	0/1:15,1:16:69.14:69,0,753	0/1:19,1:21:99:198,0,802	0/1:7,0:14:79.97:80,0,292	0/1:7,0:6:14.03:27,0,14	0/1:17,1:20:18.20:405,0,18	0/0:14,0:13:30.09:0,30,550	0/1:11,0:11:98.03:98,0,279	0/1:16,0:16:47.88:48,0,695	0/0:13,0:13:39.12:0,39,901	0/0:11,0:11:5.44:0,5,57	0/1:13,0:13:18.24:18,0,252	1/1:9,0:9:5.06:98,5,0	0/0:40,0:40:88.52:0,89,1887	0/1:13,1:14:99:153,0,218	0/1:10,0:10:99:142,0,270	0/1:6,0:6:39.78:40,0,61	0/1:15,0:12:18.97:19,0,652	0/1:24,1:26:99:114,0,1247	0/1:10,2:12:99:253,0,284	0/1:7,2:12:99:338,0,353
chr10	88449856	.	TC	T	153.29	PASS	AB=0.893;AC=6;AF=0.107;AN=56;BaseQRankSum=0.214;DP=362;FS=1.201;HRun=3;HaplotypeScore=182.9122;InbreedingCoeff=0.0410;MQ=67.60;MQ0=7;MQRankSum=-3.041;QD=3.13;ReadPosRankSum=-1.058;VQSLOD=-0.3230;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,1:23:23.73:0,24,287	0/0:7,0:7:19.35:0,19,174	0/0:33,0:16:20.93:0,21,237	0/0:46,2:18:20.30:0,20,210	0/0:6,0:6:8.97:0,9,93	0/0:10,0:9:8.41:0,8,139	0/0:9,0:9:6:0,6,113	0/0:8,0:7:20.82:0,21,149	0/1:10,0:10:2.70:3,0,123	0/0:11,0:11:26.98:0,27,274	0/0:10,0:10:9.35:0,9,77	0/0:4,0:4:9.02:0,9,102	0/0:19,0:19:22.29:0,22,273	0/1:3,9:11:11.85:225,0,12	0/0:10,0:10:15.91:0,16,226	0/0:15,0:15:5.21:0,5,202	0/1:10,0:10:8.66:9,0,104	1/1:1,6:7:0.47:1,0,0	0/0:3,0:3:8.98:0,9,88	0/0:7,0:7:9.02:0,9,109	0/0:28,0:28:5.99:0,6,324	0/0:11,0:11:12.34:0,12,73	0/0:9,0:9:22.21:0,22,214	0/0:5,0:5:2.92:0,3,19	0/0:13,0:11:23.81:0,24,156	0/0:14,0:14:22.02:0,22,314	0/0:10,0:10:17.17:0,17,184	0/1:10,0:10:0.81:1,0,44
chr10	88450562	.	A	AAGG	21165.03	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=17.332;DP=720;FS=24.808;HRun=0;HaplotypeScore=270.0172;InbreedingCoeff=0.9948;MQ=81.39;MQ0=0;MQRankSum=-19.891;QD=54.55;ReadPosRankSum=-0.867;VQSLOD=1.8138;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1655	0/0:11,0:11:33.08:0,33,508	0/0:23,0:23:66.06:0,66,1090	0/0:33,0:33:84.19:0,84,1340	1/1:4,14:18:27.09:580,27,0	1/1:2,22:24:54.19:1240,54,0	1/1:3,19:22:63.17:1397,63,0	0/0:31,0:31:90.31:0,90,1518	0/0:31,0:31:93.31:0,93,1557	0/0:23,0:23:66.22:0,66,1101	0/0:13,0:13:36.11:0,36,586	1/1:4,26:30:84.24:1851,84,0	1/1:6,34:40:99:2201,99,0	1/1:4,19:23:63.17:1386,63,0	1/1:9,45:54:99:3001,135,0	1/1:8,32:40:99:2350,105,0	0/0:36,0:36:99:0,105,1755	1/1:2,8:10:27.08:566,27,0	1/1:4,18:22:55.78:1290,56,0	1/1:6,12:18:39.13:859,39,0	0/0:56,0:56:99:0,157,2655	1/1:0,11:11:27.09:606,27,0	1/1:0,9:9:24.08:551,24,0	1/1:3,15:18:28.94:736,29,0	1/1:2,17:20:39.13:869,39,0	0/0:34,0:34:93.32:0,93,1584	1/1:4,25:29:75.26:1682,75,0	0/0:4,0:4:12.04:0,12,205
chr10	88450588	.	AGGG	A	10573.95	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=20.144;DP=690;FS=38.660;HRun=4;HaplotypeScore=304.9398;InbreedingCoeff=0.9944;MQ=78.84;MQ0=0;MQRankSum=-20.131;QD=33.36;ReadPosRankSum=6.801;VQSLOD=0.9324;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,2765	0/0:10,0:10:30.10:0,30,709	0/0:21,0:21:62.58:0,63,1423	0/0:26,0:26:68.44:0,68,1396	1/1:3,17:20:36.59:595,37,0	1/1:5,14:19:42.14:677,42,0	1/1:5,18:23:48.16:789,48,0	0/0:30,0:30:87.30:0,87,2014	0/0:39,0:39:99:0,114,2650	0/0:30,0:30:90.31:0,90,2131	0/0:22,0:22:66.23:0,66,1562	1/1:6,18:24:54.17:868,54,0	1/1:7,30:37:81.28:1345,81,0	1/1:5,17:22:48.16:794,48,0	1/1:8,35:43:90.31:1519,90,0	1/1:9,26:35:63.22:1066,63,0	0/0:34,0:34:99:0,99,2323	1/1:1,6:7:18.06:310,18,0	1/1:9,9:18:26.92:430,27,0	1/1:1,11:12:30.10:499,30,0	0/0:55,0:55:99:0,166,3831	1/1:2,12:14:36.12:592,36,0	1/1:2,5:7:15.05:244,15,0	1/1:7,9:16:17.01:178,17,0	0/0:22,0:22:51.18:0,51,1207	0/0:38,0:38:99:0,111,2606	1/1:5,15:20:42.14:670,42,0	0/0:7,0:7:21.07:0,21,483
chr10	88450595	.	AAAG	A	11236.47	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=20.432;DP=637;FS=48.670;HRun=0;HaplotypeScore=269.9018;InbreedingCoeff=0.9790;MQ=82.70;MQ0=0;MQRankSum=-20.326;QD=45.68;ReadPosRankSum=7.815;VQSLOD=2.8746;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,3099	0/0:9,0:9:27.09:0,27,665	0/0:25,0:25:73.12:0,73,1635	0/0:23,0:23:63.68:0,64,1366	1/1:0,17:17:41.94:661,42,0	1/1:1,14:15:42.14:722,42,0	1/1:1,18:19:54.05:872,54,0	0/0:31,0:31:93.31:0,93,2233	0/0:41,0:41:99:0,123,2963	0/0:29,0:29:87.29:0,87,2060	0/0:24,0:24:72.25:0,72,1746	1/1:0,18:18:54.18:921,54,0	1/1:0,30:30:81.28:1422,81,0	1/1:0,17:17:48.16:841,48,0	1/1:0,35:35:90.31:1607,90,0	1/1:0,26:26:63.22:1128,63,0	0/0:39,0:39:99:0,117,2757	1/1:0,6:6:18.06:328,18,0	1/1:0,9:9:27.01:456,27,0	1/1:0,11:11:33.04:547,33,0	0/0:58,0:58:99:0,175,4143	1/1:0,12:12:36.12:627,36,0	1/1:0,5:5:15.05:258,15,0	1/1:2,9:11:5.12:157,5,0	0/0:24,0:24:57.20:0,57,1376	0/0:37,0:37:99:0,108,2595	1/1:1,14:15:42.11:690,42,0	0/0:7,0:7:21.07:0,21,481
chr10	88450603	.	ACGG	A	11004.33	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=20.498;DP=637;FS=53.767;HRun=0;HaplotypeScore=269.0023;InbreedingCoeff=0.9909;MQ=84.44;MQ0=0;MQRankSum=-20.178;QD=44.92;ReadPosRankSum=7.428;VQSLOD=2.8059;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,2927	0/0:8,0:8:24.08:0,24,590	0/0:31,0:31:93.32:0,93,2130	0/0:19,0:19:47.30:0,47,1061	1/1:1,17:18:46.40:760,46,0	1/1:0,15:15:42.14:705,42,0	1/1:0,18:18:54.18:894,54,0	0/0:35,0:35:99:0,105,2435	0/0:39,0:39:99:0,117,2831	0/0:29,0:29:87.25:0,87,2016	0/0:26,0:26:78.27:0,78,1918	1/1:0,18:18:54.17:873,54,0	1/1:0,30:30:81.28:1372,81,0	1/1:0,17:17:48.16:817,48,0	1/1:0,35:35:90.31:1530,90,0	1/1:0,26:26:63.22:1072,63,0	0/0:39,0:40:99:0,120,2839	1/1:0,6:6:18.06:307,18,0	1/1:0,9:9:26.88:422,27,0	1/1:0,11:11:33.11:559,33,0	0/0:56,0:56:99:0,163,3886	1/1:0,12:12:36.12:607,36,0	1/1:0,5:5:15.05:251,15,0	1/1:0,9:9:12:151,12,0	0/0:25,0:25:60.20:0,60,1391	0/0:37,0:37:99:0,111,2630	1/1:1,15:16:42.14:684,42,0	0/0:6,0:6:18.06:0,18,443
chr10	88450879	.	TAGAG	T	1777.53	PASS	AB=0.863;AC=15;AF=0.268;AN=56;BaseQRankSum=4.214;DP=541;FS=16.396;HRun=0;HaplotypeScore=162.7367;InbreedingCoeff=-0.2322;MQ=71.19;MQ0=0;MQRankSum=-9.370;QD=7.41;ReadPosRankSum=-5.334;VQSLOD=-0.4413;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,2945	0/0:11,0:11:33.11:0,33,942	0/0:23,0:23:69.22:0,69,1782	0/0:14,0:14:41.17:0,41,1037	0/1:14,1:15:84.65:85,0,204	0/1:17,4:21:99:230,0,139	0/1:14,2:16:98.07:98,0,113	0/0:37,0:37:99:0,111,3165	0/0:21,0:21:63.22:0,63,1826	0/0:27,0:27:81.28:0,81,2328	0/0:26,0:26:78.27:0,78,2204	0/1:19,2:21:18.71:19,0,272	0/1:13,2:15:89.08:89,0,178	0/0:11,0:11:20.78:0,21,141	0/1:15,2:17:99:121,0,203	0/1:18,2:20:99:104,0,179	0/0:17,0:17:51.18:0,51,1445	0/1:8,1:9:30.12:54,0,30	0/1:14,4:18:99:122,0,401	0/1:24,5:29:99:240,0,331	0/0:20,0:20:57.18:0,57,1589	0/1:6,3:9:90.59:191,0,91	0/1:13,4:17:99:232,0,170	1/1:5,0:5:2.96:19,3,0	0/0:18,0:18:54.19:0,54,1559	0/0:28,0:28:84.28:0,84,2385	0/1:22,6:28:99:332,0,266	0/0:13,0:13:39.13:0,39,1129
chr10	88450883	.	G	GCAATT	15805.79	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=17.154;DP=535;FS=0.339;HRun=0;HaplotypeScore=120.1172;InbreedingCoeff=0.9711;MQ=67.63;MQ0=0;MQRankSum=-17.757;QD=63.22;ReadPosRankSum=2.896;VQSLOD=5.6774;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,2319	0/0:11,0:11:33.11:0,33,767	0/0:19,0:19:57.20:0,57,1279	0/0:13,0:13:38.13:0,38,768	1/1:3,13:16:42.14:1281,42,0	1/1:4,16:21:48.16:1329,48,0	1/1:3,11:14:24.08:683,24,0	0/0:34,0:34:99:0,102,2215	0/0:22,0:22:66.21:0,66,1474	0/0:30,0:30:87.27:0,87,1872	0/0:26,0:26:75.26:0,75,1697	1/1:2,17:20:42.14:1338,42,0	1/1:2,12:15:36.12:1074,36,0	1/1:1,11:12:24.05:718,24,0	1/1:2,14:18:33.11:979,33,0	1/1:5,16:21:45.15:1337,45,0	0/0:17,0:17:51.18:0,51,1182	1/1:3,9:14:12.04:305,12,0	1/1:11,6:17:39.13:833,39,0	1/1:5,21:27:72.25:2124,72,0	0/0:18,0:18:54.17:0,54,1212	1/1:4,5:9:27.09:663,27,0	1/1:4,12:17:42.13:1104,42,0	1/1:0,3:3:3.01:100,3,0	0/0:15,0:15:45.15:0,45,1042	0/0:30,0:30:90.30:0,90,1959	1/1:6,19:26:69.23:1942,69,0	0/0:14,0:14:42.14:0,42,970
chr10	88452133	.	A	AAAGACGGAACCCTAAGAGAGACC	66541.06	PASS	AB=0.583;AC=29;AF=0.518;AN=56;BaseQRankSum=7.267;DP=840;FS=7.072;HRun=0;HaplotypeScore=422.2435;InbreedingCoeff=0.9279;MQ=77.49;MQ0=0;MQRankSum=-20.878;QD=146.89;ReadPosRankSum=2.594;VQSLOD=3.8653;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,157,9108	0/0:8,0:8:24.08:0,24,1499	0/0:32,0:33:86.82:0,87,3282	0/0:27,0:27:71.75:0,72,3176	1/1:7,4:28:30.06:2425,30,0	1/1:6,3:21:27.09:2450,27,0	1/1:13,1:25:36.08:2928,36,0	0/0:39,0:39:99:0,108,5525	0/0:23,0:23:69.23:0,69,3937	0/0:28,0:28:81.28:0,81,5098	0/0:19,0:19:54.19:0,54,3153	1/1:12,8:39:54.62:5103,55,0	1/1:19,3:32:66.23:5507,66,0	1/1:23,3:40:66.64:5798,67,0	1/1:19,8:34:75.22:6735,75,0	0/1:12,13:42:99:6078,0,124	0/0:35,0:35:99:0,102,5850	1/1:12,2:20:45.15:3960,45,0	1/1:13,1:30:81.13:4875,81,0	1/1:10,6:29:42.06:3953,42,0	0/0:56,0:56:99:0,166,8782	1/1:17,4:30:57.15:4227,57,0	1/1:12,3:22:36.59:3307,37,0	1/1:10,4:22:30.10:2292,30,0	0/0:22,0:22:63.19:0,63,3511	0/0:30,0:30:90.30:0,90,4917	1/1:14,8:37:72.16:6903,72,0	0/0:13,0:13:39.09:0,39,2001
chr10	88452756	.	T	TCA	18984.56	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=14.987;DP=628;FS=10.431;HRun=0;HaplotypeScore=130.3469;InbreedingCoeff=0.9965;MQ=66.37;MQ0=0;MQRankSum=0.424;QD=53.03;ReadPosRankSum=3.447;VQSLOD=4.5156;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.25:0,93,1434	0/0:5,0:5:15.05:0,15,238	0/0:24,0:20:40:0,40,636	0/0:27,0:25:56.82:0,57,748	1/1:0,23:23:60.21:1215,60,0	1/1:0,21:21:57.20:1149,57,0	1/1:0,29:29:72.25:1458,72,0	0/0:26,0:26:75.24:0,75,1179	0/0:20,0:20:60.19:0,60,954	0/0:26,0:26:78.24:0,78,1222	0/0:17,0:17:51.16:0,51,808	1/1:1,35:37:99:1992,99,0	1/1:0,21:21:54.19:1096,54,0	1/1:0,18:18:54.19:1095,54,0	1/1:0,18:19:51.18:1035,51,0	1/1:0,26:26:63.22:1277,63,0	0/0:30,0:30:84.20:0,84,1340	1/1:0,17:17:42.14:846,42,0	1/1:1,14:14:18.12:673,18,0	1/1:0,21:22:63.22:1252,63,0	0/0:26,0:26:78.24:0,78,1216	1/1:0,17:16:45.15:905,45,0	1/1:0,18:20:51.17:1002,51,0	1/1:0,26:26:69.24:1400,69,0	1/1:0,22:22:57.20:1157,57,0	0/0:27,0:27:81.27:0,81,1300	1/1:1,24:25:72.25:1433,72,0	0/0:9,0:9:27.09:0,27,440
chr10	88452966	.	A	AC	15498.71	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=17.942;DP=715;FS=0.288;HRun=3;HaplotypeScore=111.3429;InbreedingCoeff=0.9992;MQ=75.24;MQ0=0;MQRankSum=-2.490;QD=36.38;ReadPosRankSum=3.150;VQSLOD=4.3584;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.23:0,75,900	0/0:9,0:9:24.05:0,24,274	0/0:28,0:28:66.15:0,66,747	0/0:21,0:19:28.17:0,28,468	1/1:0,31:31:75.25:1049,75,0	1/1:2,12:14:33.11:462,33,0	1/1:5,26:31:72.24:1006,72,0	0/0:30,0:30:78.21:0,78,905	0/0:25,0:25:75.23:0,75,900	0/0:28,0:28:84.25:0,84,1001	0/0:25,0:25:75.23:0,75,898	1/1:0,34:34:93.31:1296,93,0	1/1:0,28:28:75.25:1049,75,0	1/1:1,26:27:75.25:1048,75,0	1/1:5,31:36:99:1384,99,0	1/1:1,22:23:30.21:845,30,0	0/0:25,0:25:66.20:0,66,792	1/1:1,9:10:27.09:378,27,0	1/1:5,19:24:60.20:834,60,0	1/1:1,26:27:69.19:943,69,0	0/0:32,0:32:90.28:0,90,1080	1/1:1,27:27:69.23:966,69,0	1/1:1,23:24:63.21:882,63,0	1/1:2,33:35:96.32:1344,96,0	1/1:0,26:26:75.25:1047,75,0	0/0:28,0:28:78.23:0,78,925	1/1:2,26:28:69.23:965,69,0	0/0:9,0:8:27.08:0,27,323
chr10	88453336	.	G	GCTA	25271.71	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-13.681;DP=740;FS=12.741;HRun=0;HaplotypeScore=105.8635;InbreedingCoeff=0.9998;MQ=81.02;MQ0=0;MQRankSum=-4.258;QD=60.17;ReadPosRankSum=3.299;VQSLOD=6.1949;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,2465	0/0:13,0:12:39.13:0,39,718	0/0:25,0:25:72.23:0,72,1252	0/0:16,0:16:48.16:0,48,854	1/1:3,15:21:48.16:1123,48,0	1/1:2,17:21:48.16:1182,48,0	1/1:0,25:26:69.23:1547,69,0	0/0:28,0:28:78.27:0,78,1446	0/0:38,0:38:99:0,111,2025	0/0:23,0:23:63.21:0,63,1136	0/0:18,0:18:54.16:0,54,943	1/1:2,25:28:75.26:1809,75,0	1/1:2,34:37:99:2507,105,0	1/1:0,23:24:66.22:1561,66,0	1/1:2,41:44:99:2633,117,0	1/1:3,32:37:99:2403,99,0	0/0:33,0:33:96.33:0,96,1778	1/1:0,10:10:27.09:665,27,0	1/1:0,16:17:51.14:1180,51,0	1/1:3,24:27:72.24:1471,72,0	0/0:39,0:39:99:0,114,2110	1/1:1,27:30:78.27:1825,78,0	1/1:2,18:26:51.17:1163,51,0	1/1:2,16:19:41.94:995,42,0	1/1:2,31:33:87.29:1991,87,0	0/0:30,0:30:87.30:0,87,1622	1/1:1,19:19:51.17:1216,51,0	0/0:12,0:12:33.09:0,33,581
chr10	88454026	.	AAC	A	12136.44	PASS	AB=0.529;AC=29;AF=0.518;AN=56;BaseQRankSum=16.902;DP=705;FS=39.000;HRun=0;HaplotypeScore=132.4048;InbreedingCoeff=0.9335;MQ=62.95;MQ0=9;MQRankSum=-4.520;QD=37.11;ReadPosRankSum=1.387;VQSLOD=2.9852;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:82.20:0,82,1553	0/0:15,0:15:45.14:0,45,788	0/0:47,0:30:58.36:0,58,892	0/0:56,0:26:9.14:0,9,533	1/1:5,23:27:69.09:948,69,0	1/1:0,20:19:47.79:661,48,0	1/1:6,18:24:65.90:928,66,0	0/0:29,0:29:83.72:0,84,1410	0/0:20,0:20:60.20:0,60,1133	0/0:38,0:38:99:0,114,2077	0/0:25,0:25:72.25:0,72,1387	1/1:2,18:20:60.14:850,60,0	1/1:0,26:26:72.24:1075,72,0	1/1:3,30:32:96.29:1365,96,0	1/1:0,21:21:39.06:583,39,0	0/1:2,16:18:6.58:667,0,7	0/0:31,0:31:90.31:0,90,1732	1/1:2,17:18:51.10:695,51,0	1/1:0,10:10:30.07:425,30,0	1/1:0,19:18:48.13:677,48,0	0/0:17,0:17:49.03:0,49,877	1/1:3,23:24:57.01:778,57,0	1/1:0,14:13:39.13:582,39,0	1/1:1,22:23:63.21:939,63,0	0/0:21,0:21:63.17:0,63,1177	0/0:33,0:32:93.28:0,93,1661	1/1:0,26:26:66.20:962,66,0	0/0:16,0:16:45.14:0,45,833
chr10	88454064	.	A	AC	3936.72	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.566;DP=597;FS=12.128;HRun=6;HaplotypeScore=135.0168;InbreedingCoeff=0.9991;MQ=57.41;MQ0=6;MQRankSum=-8.940;QD=29.16;ReadPosRankSum=1.860;VQSLOD=1.9450;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,1033	0/0:15,0:15:42.09:0,42,428	0/0:27,0:18:38.63:0,39,355	0/0:25,0:14:25.85:0,26,246	1/1:1,21:21:54.16:665,54,0	1/1:3,17:19:45.14:566,45,0	1/1:4,19:23:57.09:698,57,0	0/0:21,0:21:54.12:0,54,551	0/0:16,0:16:48.11:0,48,490	0/0:36,0:36:90.19:0,90,914	0/0:22,0:22:57.11:0,57,573	1/1:1,12:13:39.08:470,39,0	0/0:21,0:20:45.07:0,45,452	1/1:4,23:25:66.21:823,66,0	0/0:16,0:16:29.95:0,30,300	0/0:18,0:18:51.12:0,51,520	0/0:33,0:33:84.15:0,84,848	1/1:5,10:15:33.11:415,33,0	0/0:18,0:16:33.07:0,33,336	0/0:16,0:16:42.09:0,42,428	0/0:26,0:26:72.12:0,72,723	1/1:3,12:14:24.08:300,24,0	0/0:13,0:12:33.07:0,33,337	0/0:18,0:18:45.03:0,45,439	0/0:20,0:20:60.12:0,60,605	0/0:20,0:20:51.10:0,51,514	0/0:30,0:29:60.13:0,60,611	0/0:13,0:13:39.09:0,39,398
chr10	88454147	.	CAT	C	4224.81	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=14.359;DP=482;FS=11.409;HRun=0;HaplotypeScore=84.6503;InbreedingCoeff=0.8848;MQ=60.95;MQ0=4;MQRankSum=-6.870;QD=25.30;ReadPosRankSum=-3.204;VQSLOD=4.5013;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,105,1878	0/0:10,0:10:30.10:0,30,547	0/0:27,0:21:60.18:0,60,995	0/0:19,0:17:20.35:0,20,609	1/1:1,13:14:27.09:408,27,0	1/1:0,13:12:27.09:353,27,0	1/1:2,24:23:60.20:890,60,0	0/0:22,0:22:66.23:0,66,1196	0/0:23,0:23:66.23:0,66,1192	0/0:25,0:25:75.26:0,75,1365	0/0:18,0:18:54.18:0,54,964	1/1:1,9:10:23.70:367,24,0	1/1:7,0:5:8.92:84,9,0	1/1:2,13:15:33.07:474,33,0	1/1:13,0:12:9.88:122,10,0	1/1:11,0:11:13.09:79,13,0	0/0:37,0:36:99:0,111,1943	1/1:0,14:13:36.12:539,36,0	1/1:3,0:3:3.02:32,3,0	0/1:6,0:6:0.35:135,0,0	0/0:51,0:51:99:0,144,2588	1/1:0,12:12:33.08:488,33,0	1/1:3,1:4:11.39:106,11,0	1/1:13,0:13:5.90:38,6,0	0/0:14,0:14:42.13:0,42,738	0/0:24,0:25:29.63:0,30,1245	1/1:6,0:6:9.49:108,9,0	0/0:3,0:3:9.03:0,9,165
chr10	88454154	.	C	CCA	2932.25	PASS	AB=0.651;AC=28;AF=0.500;AN=56;BaseQRankSum=12.457;DP=512;FS=41.113;HRun=0;HaplotypeScore=94.5466;InbreedingCoeff=0.8395;MQ=59.11;MQ0=4;MQRankSum=-5.804;QD=14.59;ReadPosRankSum=-4.380;VQSLOD=1.2769;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,1488	0/0:13,0:13:36.08:0,36,516	0/0:27,0:19:44.19:0,44,652	0/0:18,0:15:41.92:0,42,556	1/1:4,0:14:10.34:161,10,0	1/1:6,0:15:23.23:207,23,0	1/1:12,0:28:58.04:613,58,0	0/0:19,0:19:54.16:0,54,800	0/0:23,0:23:66.19:0,66,981	0/0:23,0:23:69.22:0,69,1027	0/0:19,0:19:57.14:0,57,802	1/1:6,0:13:36.28:334,36,0	1/1:2,7:7:5.97:79,6,0	1/1:6,0:17:31.96:300,32,0	0/1:3,1:15:1.20:92,0,1	1/1:0,8:13:17.89:171,18,0	0/0:40,0:39:99:0,117,1678	1/1:2,0:13:28.06:302,28,0	1/1:4,0:5:14.67:128,15,0	1/1:7,1:8:3.78:117,4,0	0/0:52,0:52:99:0,144,2168	1/1:6,0:14:30.54:302,31,0	0/1:2,0:3:2.03:70,0,2	1/1:1,12:15:3.48:60,3,0	0/0:13,0:13:39.13:0,39,609	0/0:24,0:24:66.90:0,67,1035	1/1:10,0:10:23.89:211,24,0	0/0:3,0:3:9.03:0,9,141
chr10	88454344	.	GAA	G	4792.47	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=15.322;DP=558;FS=34.069;HRun=2;HaplotypeScore=99.6249;InbreedingCoeff=0.9750;MQ=64.13;MQ0=3;MQRankSum=-14.970;QD=19.48;ReadPosRankSum=2.167;VQSLOD=1.0180;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,163,3152	0/0:16,0:16:48.15:0,48,939	0/0:23,0:20:60.20:0,60,1149	0/0:24,0:24:63.20:0,63,1168	1/1:0,11:9:9.03:107,9,0	1/1:1,22:20:35.68:480,36,0	1/1:4,16:11:11.53:140,12,0	0/0:26,0:26:75.26:0,75,1512	0/0:21,0:21:63.22:0,63,1280	0/0:31,0:31:93.31:0,93,1820	0/0:14,0:13:42.14:0,42,797	1/1:2,19:15:27.09:394,27,0	1/1:2,17:14:30.10:439,30,0	1/1:0,28:19:30.10:441,30,0	1/1:0,20:18:26.68:392,27,0	1/1:1,16:13:30.10:454,30,0	0/0:26,0:26:78.27:0,78,1584	1/1:1,10:9:15.05:234,15,0	1/1:0,6:6:15.05:236,15,0	1/1:0,10:9:14.72:227,15,0	0/0:27,0:27:81.26:0,81,1588	1/1:0,19:17:15.05:200,15,0	1/1:0,13:12:24.08:341,24,0	1/1:0,8:8:14.72:176,15,0	0/0:17,0:17:51.17:0,51,997	0/0:25,0:25:75.25:0,75,1467	1/1:1,14:14:36.12:531,36,0	0/0:8,0:8:24.08:0,24,477
chr10	88454349	.	AAAGT	A	6479.14	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=15.576;DP=550;FS=23.019;HRun=0;HaplotypeScore=111.3030;InbreedingCoeff=0.9813;MQ=65.30;MQ0=1;MQRankSum=-15.165;QD=26.77;ReadPosRankSum=1.297;VQSLOD=2.5320;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,154,4274	0/0:15,0:15:45.15:0,45,1263	0/0:23,0:22:62.87:0,63,1634	0/0:24,0:24:51.08:0,51,1571	1/1:0,11:9:15.01:205,15,0	1/1:4,22:20:33:596,33,0	1/1:4,16:10:9.03:173,9,0	0/0:27,0:27:78.25:0,78,2127	0/0:21,0:21:63.22:0,63,1826	0/0:30,0:30:90.30:0,90,2517	0/0:15,0:14:45.15:0,45,1260	1/1:0,19:13:30.10:559,30,0	1/1:0,17:12:27.09:521,27,0	1/1:0,28:19:30.10:581,30,0	1/1:0,20:18:26.91:519,27,0	1/1:1,16:13:33.11:641,33,0	0/0:26,0:26:78.27:0,78,2247	1/1:1,10:9:18.02:324,18,0	1/1:0,6:6:15.05:306,15,0	1/1:0,10:9:17.72:333,18,0	0/0:27,0:27:81.28:0,81,2284	1/1:3,19:19:18.02:291,18,0	1/1:0,13:12:33.07:547,33,0	1/1:0,8:8:14.88:236,15,0	0/0:17,0:17:51.18:0,51,1464	0/0:22,0:22:66.23:0,66,1890	1/1:0,14:13:33.11:646,33,0	0/0:10,0:10:30.10:0,30,853
chr10	88454434	.	T	TA	4592.32	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=1.931;DP=688;FS=2.110;HRun=7;HaplotypeScore=109.9918;InbreedingCoeff=0.9627;MQ=58.84;MQ0=0;MQRankSum=-1.427;QD=26.86;ReadPosRankSum=-0.175;VQSLOD=4.2510;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,162,1536	0/0:12,0:12:24:0,24,218	0/0:11,0:6:17.91:0,18,150	0/0:18,0:15:20.86:0,21,185	0/0:32,0:32:9.08:0,9,269	0/0:17,0:17:22.70:0,23,174	0/0:28,0:27:62.40:0,62,318	0/0:41,0:40:96.13:0,96,922	0/0:12,0:12:30.04:0,30,284	0/0:28,0:28:69.10:0,69,662	0/0:29,0:29:81.08:0,81,772	0/0:24,0:24:26.37:0,26,215	1/1:5,15:20:39.12:470,39,0	0/0:23,0:23:36.72:0,37,244	1/1:5,17:22:48.15:580,48,0	1/1:3,29:32:72.02:830,72,0	0/0:36,0:36:91.71:0,92,949	0/0:26,0:26:33.27:0,33,246	1/1:3,16:17:39.12:471,39,0	1/1:1,18:19:54.17:651,54,0	0/0:33,0:33:93.11:0,93,882	0/0:22,0:22:4.01:0,4,152	1/1:6,12:18:36.11:433,36,0	1/1:1,24:25:60.18:723,60,0	0/0:23,0:23:60.09:0,60,579	0/0:33,0:33:95.52:0,96,906	1/1:4,12:16:36.11:435,36,0	0/0:11,0:11:33.05:0,33,319
chr10	88454891	.	GC	G	821.81	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.748;DP=760;FS=2.770;HRun=1;HaplotypeScore=73.7812;InbreedingCoeff=0.9968;MQ=86.09;MQ0=0;MQRankSum=-0.607;QD=32.87;ReadPosRankSum=0.731;VQSLOD=3.3704;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.23:0,72,1125	0/0:12,0:12:36.12:0,36,575	0/0:22,1:23:27.68:0,28,952	0/0:26,0:26:72.16:0,72,1005	0/0:33,0:33:99:0,99,1554	0/0:27,0:27:81.26:0,81,1265	0/0:31,0:31:87.28:0,87,1364	0/0:36,0:36:99:0,105,1636	1/1:0,25:25:66.22:917,66,0	0/0:45,0:45:99:0,135,2108	0/0:17,0:17:48.16:0,48,767	0/0:30,0:30:84.26:0,84,1295	0/0:42,0:42:99:0,126,1983	0/0:33,0:33:99:0,99,1563	0/0:29,0:29:87.30:0,87,1388	0/0:26,0:26:78.27:0,78,1246	0/0:18,0:18:54.16:0,54,837	0/0:12,0:12:36.08:0,36,547	0/0:19,0:19:57.19:0,57,908	0/0:25,0:25:75.26:0,75,1197	0/0:32,0:32:96.33:0,96,1531	0/0:23,0:23:63.21:0,63,1001	0/0:32,0:32:93.21:0,93,1358	0/0:24,0:24:72.25:0,72,1150	0/0:31,0:30:93.24:0,93,1430	0/0:31,0:31:93.30:0,93,1444	0/0:45,0:44:99:0,135,2126	0/0:9,0:9:24.08:0,24,383
chr10	88455053	.	T	TTC	8269.15	PASS	AB=0.909;AC=15;AF=0.268;AN=56;BaseQRankSum=13.446;DP=728;FS=0.331;HRun=0;HaplotypeScore=100.6255;InbreedingCoeff=0.9490;MQ=86.61;MQ0=1;MQRankSum=-0.401;QD=42.19;ReadPosRankSum=2.814;VQSLOD=6.7003;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1717	0/0:10,0:10:30.06:0,30,391	0/0:31,0:31:81.25:0,81,1127	0/0:26,0:26:41.62:0,42,774	1/1:3,29:32:87.30:1586,87,0	1/1:3,22:26:57.20:1044,57,0	1/1:3,35:38:99:1868,102,0	0/0:38,0:38:99:0,99,1379	0/0:23,0:23:59.53:0,60,896	0/0:40,0:40:99:0,114,1599	0/0:21,0:21:60.20:0,60,860	1/1:1,15:16:42.14:769,42,0	0/0:26,0:26:78.25:0,78,1096	1/1:2,24:26:72.25:1301,72,0	0/0:32,0:32:90.30:0,90,1286	0/0:26,0:26:75.23:0,75,1038	0/0:25,0:25:69.19:0,69,961	1/1:0,14:14:33.11:605,33,0	0/0:26,0:26:69.20:0,69,936	0/0:31,0:31:81.27:0,81,1152	0/0:31,0:31:90.30:0,90,1289	1/1:2,20:23:60.21:1096,60,0	0/0:15,0:15:39.11:0,39,522	0/1:18,2:20:0.83:1,0,676	0/0:15,0:15:45.15:0,45,641	0/0:30,0:30:84.25:0,84,1153	0/0:29,0:29:81.24:0,81,1102	0/0:14,0:14:39.13:0,39,559
chr10	88455296	.	C	CT	5755.79	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-2.547;DP=736;FS=5.470;HRun=1;HaplotypeScore=106.1411;InbreedingCoeff=0.9998;MQ=82.39;MQ0=0;MQRankSum=-5.205;QD=41.71;ReadPosRankSum=0.988;VQSLOD=4.4774;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:88.32:0,88,1558	0/0:14,0:14:39.11:0,39,491	0/0:30,0:30:87.26:0,87,1079	0/0:28,0:28:77.91:0,78,991	1/1:0,25:25:72.24:1079,72,0	1/1:0,20:20:57.19:854,57,0	1/1:0,15:15:42.14:630,42,0	0/0:46,0:46:99:0,132,1690	0/0:27,0:27:81.25:0,81,1037	0/0:35,0:35:99:0,99,1274	0/0:41,0:41:99:0,123,1582	1/1:0,22:22:57.19:854,57,0	0/0:18,0:18:54.18:0,54,699	1/1:1,21:22:57.19:854,57,0	0/0:34,0:34:99:0,102,1323	0/0:34,0:34:96.31:0,96,1246	0/0:32,0:32:90.25:0,90,1149	1/1:0,15:15:42.14:629,42,0	0/0:18,0:18:48.16:0,48,623	0/0:27,0:27:78.25:0,78,1012	0/0:26,0:26:78.24:0,78,999	1/1:0,19:19:57.19:855,57,0	0/0:32,0:32:87.25:0,87,1100	0/0:19,0:19:48.11:0,48,604	0/0:26,0:26:75.23:0,75,960	0/0:40,0:40:99:0,117,1494	0/0:19,0:19:54.15:0,54,685	0/0:9,0:9:27.09:0,27,351
chr10	88455395	.	CTG	C	4714.21	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=19.188;DP=741;FS=4.275;HRun=0;HaplotypeScore=159.8242;InbreedingCoeff=0.9888;MQ=80.77;MQ0=0;MQRankSum=-18.289;QD=24.55;ReadPosRankSum=2.619;VQSLOD=5.4889;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,2130	0/0:19,0:19:57.18:0,57,1065	0/0:22,0:22:57.20:0,57,1086	0/0:32,0:32:93.28:0,93,1631	0/0:33,0:33:90.31:0,90,1735	0/0:23,0:23:69.22:0,69,1299	0/0:24,0:24:66.23:0,66,1255	0/0:43,0:43:99:0,123,2368	0/0:36,0:36:99:0,108,2068	0/0:39,0:39:99:0,114,2137	0/0:23,0:23:69.22:0,69,1282	0/0:25,0:25:72.25:0,72,1391	1/1:0,24:23:69.12:667,69,0	0/0:37,0:37:99:0,105,2028	1/1:1,28:29:87.15:839,87,0	1/1:3,16:19:51.05:486,51,0	0/0:31,0:31:93.29:0,93,1738	0/0:15,0:15:45.15:0,45,856	1/1:4,17:21:50.95:503,51,0	1/1:5,32:37:99:961,102,0	0/0:34,0:34:99:0,102,1970	0/0:19,0:19:54.15:0,54,1043	1/1:5,17:22:54.05:503,54,0	1/1:3,11:14:17.54:167,18,0	0/0:19,0:19:57.20:0,57,1101	0/0:33,1:34:70.85:0,71,1876	1/1:4,21:26:60.11:587,60,0	0/0:3,0:3:9.03:0,9,173
chr10	88455399	.	AAT	A	5154.82	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=18.951;DP=721;FS=3.772;HRun=0;HaplotypeScore=151.4373;InbreedingCoeff=0.9933;MQ=82.63;MQ0=0;MQRankSum=-18.698;QD=29.97;ReadPosRankSum=3.145;VQSLOD=6.7721;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,2182	0/0:18,0:18:54.19:0,54,1097	0/0:22,0:22:66.23:0,66,1287	0/0:34,0:34:97.51:0,98,1833	0/0:32,0:32:87.30:0,87,1758	0/0:21,0:21:63.21:0,63,1232	0/0:22,0:22:63.22:0,63,1279	0/0:43,0:43:99:0,126,2555	0/0:35,0:35:99:0,105,2134	0/0:40,0:40:99:0,120,2397	0/0:25,0:25:75.26:0,75,1507	0/0:26,0:26:75.24:0,75,1488	1/1:1,24:24:69.18:736,69,0	0/0:36,0:36:99:0,102,2070	1/1:1,29:30:90.24:981,90,0	1/1:0,16:16:48.12:514,48,0	0/0:30,0:30:90.31:0,90,1800	0/0:16,0:16:48.16:0,48,970	1/1:0,17:17:45.13:513,45,0	1/1:1,32:33:96.24:1027,96,0	0/0:34,0:34:99:0,102,2073	0/0:21,0:21:60.17:0,60,1219	1/1:0,17:17:51.11:529,51,0	1/1:0,11:11:17.56:185,18,0	0/0:19,0:19:57.20:0,57,1158	0/0:33,1:34:67.87:0,68,1956	1/1:1,22:23:63.15:669,63,0	0/0:4,0:4:12.04:0,12,243
chr10	88455452	.	CT	C	8920.61	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=15.449;DP=693;FS=6.538;HRun=7;HaplotypeScore=126.3623;InbreedingCoeff=0.9998;MQ=79.49;MQ0=0;MQRankSum=-5.815;QD=25.71;ReadPosRankSum=2.186;VQSLOD=3.7198;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,1442	0/0:16,0:16:48.15:0,48,604	0/0:18,0:18:42.12:0,42,507	0/0:22,0:21:51.22:0,51,553	1/1:1,29:30:75.16:763,75,0	1/1:4,15:19:42.09:428,42,0	1/1:3,15:18:42.09:429,42,0	0/0:48,0:48:99:0,122,754	0/0:31,0:31:90.29:0,90,1132	0/0:29,1:30:77.61:0,78,946	0/0:21,0:21:60.63:0,61,709	1/1:3,22:25:57.13:582,57,0	1/1:1,23:24:66.15:672,66,0	1/1:2,27:29:75.17:765,75,0	1/1:5,33:38:96.21:979,96,0	1/1:3,27:30:78.17:796,78,0	0/0:25,0:25:69.17:0,69,837	1/1:1,12:13:36.08:367,36,0	1/1:0,14:14:39.08:392,39,0	1/1:3,22:25:60.13:611,60,0	0/0:34,0:34:62.26:0,62,539	1/1:1,19:20:54.09:550,54,0	1/1:1,15:16:42.09:428,42,0	1/1:0,16:16:36.07:365,36,0	0/0:18,0:18:51.15:0,51,626	0/0:30,1:31:52.35:0,52,449	1/1:3,27:30:78.17:794,78,0	0/0:9,0:9:26.65:0,27,175
chr10	88456323	.	A	AG	14181.54	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-8.366;DP=689;FS=5.231;HRun=2;HaplotypeScore=65.4049;InbreedingCoeff=0.9978;MQ=91.58;MQ0=0;MQRankSum=-2.979;QD=38.75;ReadPosRankSum=4.384;VQSLOD=5.4434;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.25:0,78,966	0/0:14,0:14:42.12:0,42,508	0/0:26,0:26:66.19:0,66,800	0/0:30,0:30:81.71:0,82,989	1/1:2,31:33:87.25:1227,87,0	1/1:0,27:27:72.24:1037,72,0	1/1:2,17:19:48.16:678,48,0	0/0:32,0:32:87.27:0,87,1068	0/0:22,0:22:66.19:0,66,805	0/0:28,0:28:84.26:0,84,1040	0/0:28,0:28:75.22:0,75,916	1/1:1,25:26:72.24:1037,72,0	1/1:0,23:23:63.21:906,63,0	1/1:0,23:23:63.21:906,63,0	1/1:2,30:32:78.26:1123,78,0	1/1:1,26:27:78.26:1123,78,0	0/0:26,0:26:75.21:0,75,915	1/1:1,11:12:33.11:474,33,0	1/1:2,15:17:45.13:625,45,0	1/1:1,26:27:75.25:1080,75,0	0/0:38,0:38:99:0,108,1325	1/1:2,25:28:72.24:1027,72,0	1/1:0,23:23:69.23:994,69,0	1/1:0,17:17:48.16:691,48,0	0/0:14,0:14:42.13:0,42,521	0/0:33,0:33:93.29:0,93,1152	1/1:2,30:32:87.29:1252,87,0	0/0:5,0:5:15.05:0,15,186
chr10	88457239	.	ATG	A	6815.95	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=8.260;DP=648;FS=1.110;HRun=0;HaplotypeScore=112.2345;InbreedingCoeff=0.9990;MQ=93.49;MQ0=0;MQRankSum=-6.100;QD=40.57;ReadPosRankSum=3.125;VQSLOD=6.3501;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,2313	0/0:9,0:9:27.09:0,27,521	0/0:31,0:32:84.03:0,84,1574	0/0:37,0:36:76.66:0,77,1701	0/0:22,0:22:57.18:0,57,1062	0/0:26,0:26:66.21:0,66,1241	0/0:29,0:29:66.21:0,66,1237	0/0:34,0:34:96.32:0,96,1802	0/0:25,0:25:69.24:0,69,1296	0/0:24,0:24:72.25:0,72,1376	0/0:11,0:11:33.11:0,33,636	0/0:19,0:19:48.16:0,48,927	1/1:2,27:29:78.26:1189,78,0	0/0:28,0:28:72.25:0,72,1379	1/1:1,18:19:51.17:781,51,0	1/1:0,24:25:75.25:1144,75,0	0/0:28,0:28:81.26:0,81,1530	0/0:12,0:12:36.12:0,36,695	1/1:1,17:18:54.14:768,54,0	1/1:0,17:17:45.15:689,45,0	0/0:32,0:31:66.23:0,66,1265	0/0:20,0:20:54.03:0,54,1042	1/1:0,13:13:33.11:505,33,0	1/1:0,17:17:32.98:505,33,0	0/0:15,0:15:39.10:0,39,685	0/0:26,0:26:78.27:0,78,1505	1/1:1,29:30:81.27:1236,81,0	0/0:8,0:8:21.07:0,21,405
chr10	88457267	.	A	AGTGTGTGTGT	9718.30	PASS	AB=0.919;AC=39;AF=0.696;AN=56;BaseQRankSum=5.194;DP=767;FS=2.512;HRun=0;HaplotypeScore=307.7464;InbreedingCoeff=0.7187;MQ=64.22;MQ0=6;MQRankSum=-9.098;QD=17.11;ReadPosRankSum=-2.182;VQSLOD=3.1281;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:50:65.83:0,66,1564	0/0:12,0:12:24.07:0,24,652	0/0:32,0:18:6.01:0,6,110	0/0:37,0:30:7.38:0,7,142	0/1:19,6:28:0.46:1,0,0	1/1:21,5:28:13.86:404,14,0	1/1:21,8:31:15.48:401,15,0	1/1:40,0:42:44.74:813,45,0	0/0:21,0:21:29.98:0,30,856	0/0:25,0:29:54.17:0,54,1281	0/0:13,0:15:15.05:0,15,384	1/1:19,2:21:11.40:393,11,0	1/1:39,0:39:23.55:822,24,0	1/1:27,0:31:17.96:748,18,0	1/1:27,0:31:23.88:842,24,0	1/1:32,0:35:20.87:780,21,0	0/1:28,0:30:15.91:16,0,1050	1/1:13,1:15:30.10:1058,30,0	1/1:29,0:29:27.09:1091,27,0	1/1:23,0:24:4.57:131,5,0	1/1:21,0:32:7.76:105,8,0	1/1:18,6:25:2.76:144,3,0	1/1:19,0:19:6:154,6,0	0/1:15,0:15:0:0,0,0	1/1:17,3:24:12.04:566,12,0	1/1:22,0:34:20.15:808,20,0	1/1:23,0:25:12.51:396,13,0	1/1:5,0:8:8.27:46,8,0
chr10	88457418	.	T	TTGTG	8871.56	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=0.179;DP=673;FS=0.000;HRun=0;HaplotypeScore=119.0639;InbreedingCoeff=0.9693;MQ=74.44;MQ0=1;MQRankSum=-3.035;QD=49.56;ReadPosRankSum=0.590;VQSLOD=5.5307;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:78.21:0,78,1265	0/0:7,0:7:21.07:0,21,360	0/0:26,0:25:45.68:0,46,807	0/0:31,0:30:65.81:0,66,997	1/1:11,21:33:66.01:1481,66,0	1/1:6,21:27:60.21:1495,60,0	1/1:5,9:15:24.08:588,24,0	0/0:26,0:26:60.20:0,60,1017	0/0:25,0:24:69.24:0,69,1195	0/0:31,0:31:81.28:0,81,1409	0/0:21,0:21:57.19:0,57,977	1/1:4,24:28:54.19:1357,54,0	0/0:24,0:24:60.19:0,60,1016	1/1:8,26:34:75.26:1751,75,0	0/0:24,0:24:60.16:0,60,1011	0/0:34,0:34:87.24:0,87,1430	0/0:20,0:20:4.32:0,4,797	1/1:3,6:9:18.53:457,19,0	0/0:13,0:13:36.08:0,36,544	0/0:26,0:26:72.22:0,72,1197	0/0:28,0:28:81.28:0,81,1403	1/1:4,27:31:72.25:1742,72,0	0/0:22,0:22:60.19:0,60,1012	0/0:21,0:21:51.17:0,51,865	0/0:17,0:17:45.15:0,45,779	0/0:27,0:27:72.25:0,72,1250	0/0:34,0:35:97.57:0,98,1672	0/0:5,0:5:15.03:0,15,227
chr10	88458830	.	G	GA	13589.57	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=15.700;DP=623;FS=10.130;HRun=1;HaplotypeScore=96.0487;InbreedingCoeff=0.9993;MQ=87.29;MQ0=0;MQRankSum=-3.185;QD=40.93;ReadPosRankSum=2.843;VQSLOD=4.5131;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:69.22:0,69,895	0/0:9,0:9:27.09:0,27,349	0/0:26,0:26:78.24:0,78,993	0/0:17,0:17:51.16:0,51,640	1/1:1,23:24:69.19:1009,69,0	1/1:0,19:19:57.19:854,57,0	1/1:1,17:18:48.16:720,48,0	0/0:20,0:20:60.19:0,60,766	0/0:14,0:14:42.14:0,42,545	0/0:21,0:21:63.20:0,63,806	0/0:32,0:32:93.30:0,93,1207	1/1:0,19:19:54.18:809,54,0	1/1:0,21:21:57.19:854,57,0	1/1:1,18:19:45.15:672,45,0	1/1:1,28:29:78.26:1169,78,0	1/1:0,22:22:63.21:944,63,0	0/0:36,0:36:99:0,108,1402	1/1:1,17:18:39.13:584,39,0	1/1:3,20:23:63.21:944,63,0	1/1:0,28:28:84.28:1250,84,0	0/0:33,0:33:96.31:0,96,1244	1/1:1,19:20:60.19:881,60,0	1/1:1,22:23:66.22:989,66,0	1/1:0,23:23:57.19:854,57,0	0/0:25,0:25:72.20:0,72,904	0/0:23,0:23:66.21:0,66,857	1/1:2,24:26:72.20:1054,72,0	0/0:7,0:7:21.07:0,21,273
chr10	88458992	.	AT	A	2635.87	PASS	AB=0.889;AC=13;AF=0.232;AN=56;BaseQRankSum=10.761;DP=582;FS=1.774;HRun=9;HaplotypeScore=58.5197;InbreedingCoeff=0.9282;MQ=70.98;MQ0=0;MQRankSum=-0.058;QD=21.26;ReadPosRankSum=0.590;VQSLOD=4.3898;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.18:0,72,809	0/1:7,1:8:3.39:3,0,216	0/0:18,0:17:26.90:0,27,232	0/0:11,0:10:19.71:0,20,223	0/0:32,0:33:96.08:0,96,1060	0/0:23,0:23:69.17:0,69,782	0/0:15,0:15:45.13:0,45,520	1/1:1,26:27:78:701,78,0	1/1:1,12:13:29.93:274,30,0	0/0:26,0:26:69.16:0,69,768	0/0:31,0:31:84.24:0,84,959	0/0:28,0:28:78.11:0,78,837	0/0:20,0:20:51.15:0,51,589	0/0:21,1:22:23.65:0,24,498	0/0:20,0:20:50.50:0,51,552	0/0:15,0:15:39.11:0,39,442	0/0:21,0:21:57.15:0,57,647	0/0:19,0:19:45.13:0,45,519	0/0:23,0:23:51.14:0,51,579	0/0:27,0:27:78.23:0,78,900	1/1:0,14:14:39.02:357,39,0	0/0:19,0:19:53.99:0,54,598	0/0:24,0:24:72.21:0,72,831	0/0:14,0:14:42.08:0,42,470	1/1:0,21:21:54.03:494,54,0	1/1:1,27:28:80.07:720,80,0	0/0:23,0:23:66.15:0,66,747	1/1:3,10:13:30.01:275,30,0
chr10	88461136	.	GTT	G	3700.50	PASS	AB=0.921;AC=20;AF=0.357;AN=56;BaseQRankSum=10.877;DP=690;FS=8.899;HRun=16;HaplotypeScore=130.5955;InbreedingCoeff=0.7877;MQ=62.87;MQ0=12;MQRankSum=1.253;QD=14.34;ReadPosRankSum=10.110;VQSLOD=0.7499;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:27:41.95:0,42,470	0/0:10,0:12:26.41:0,26,282	0/0:41,0:15:7.35:0,7,140	0/1:32,0:19:25.59:26,0,63	1/1:11,24:36:71.41:593,71,0	1/1:6,21:28:54.96:453,55,0	1/1:2,8:10:20.73:175,21,0	0/0:35,0:38:71.12:0,71,699	1/1:2,11:14:29.66:237,30,0	0/0:33,0:35:73.95:0,74,883	0/0:18,0:28:55.70:0,56,582	1/1:3,16:18:44.80:374,45,0	0/0:22,0:22:28.31:0,28,263	1/1:3,17:20:47.77:399,48,0	0/0:22,0:22:52.96:0,53,512	0/0:18,0:18:34.67:0,35,355	0/0:26,0:29:47.36:0,47,481	1/1:7,16:23:25.63:376,26,0	0/0:20,0:20:7.13:0,7,222	0/0:33,0:33:34.47:0,34,313	0/1:13,1:16:13.81:14,0,61	1/1:3,21:24:59.72:499,60,0	0/0:14,0:14:8.66:0,9,198	0/0:20,0:20:15.72:0,16,278	1/1:9,26:36:66.86:555,67,0	0/0:17,0:25:7.57:0,8,179	0/0:32,0:32:49.07:0,49,426	0/0:7,1:15:6.42:0,6,120
chr10	88461574	.	C	CTTT	6122.08	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-0.013;DP=704;FS=2.226;HRun=8;HaplotypeScore=112.1686;InbreedingCoeff=0.9347;MQ=65.05;MQ0=2;MQRankSum=-4.387;QD=21.71;ReadPosRankSum=-0.951;VQSLOD=2.4778;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,135,1774	0/0:9,0:9:18.03:0,18,237	0/1:15,0:11:0.29:0,0,175	0/0:15,0:15:17.61:0,18,299	1/1:8,20:31:54.08:927,54,0	1/1:4,15:19:39.13:788,39,0	1/1:3,17:19:39.13:745,39,0	1/1:9,0:29:28.40:106,28,0	0/0:19,0:19:42.10:0,42,551	0/0:27,0:27:63.18:0,63,816	0/0:23,0:23:60.17:0,60,772	1/1:8,19:31:48.01:837,48,0	0/0:14,0:14:36.11:0,36,473	1/1:8,16:30:44.94:700,45,0	0/0:35,0:35:84.20:0,84,1068	0/0:17,0:17:36.05:0,36,456	0/0:43,0:46:99:0,120,1508	1/1:5,23:29:60.18:1153,60,0	0/0:20,0:19:45.12:0,45,584	0/0:30,0:30:72.20:0,72,931	1/1:2,0:27:20.78:69,21,0	1/1:5,18:24:42.06:728,42,0	0/0:28,0:28:69.18:0,69,867	0/0:32,1:33:90.29:0,90,1178	0/0:28,0:28:69.82:0,70,912	1/1:7,0:22:21.41:65,21,0	0/0:30,0:29:68.74:0,69,987	1/1:2,0:4:2.49:5,2,0
chr10	88462121	.	CGTGTGTGTGT	C	6310.05	PASS	AB=0.921;AC=37;AF=0.685;AN=54;BaseQRankSum=9.314;DP=619;FS=1.948;HRun=0;HaplotypeScore=188.5342;InbreedingCoeff=0.4330;MQ=70.12;MQ0=8;MQRankSum=-7.764;QD=13.72;ReadPosRankSum=0.525;VQSLOD=3.9039;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:39.09:0,39,1226	0/0:7,0:7:12.04:0,12,583	0/0:24,0:19:3.01:0,3,42	./.	1/1:21,0:21:6.91:141,7,0	1/1:23,0:22:21.07:471,21,0	1/1:23,0:23:6.02:139,6,0	1/1:19,0:18:4.91:66,5,0	0/1:14,0:14:34.83:35,0,45	0/0:19,0:21:27.07:0,27,698	0/0:19,0:21:36.12:0,36,1338	1/1:24,0:24:15.05:346,15,0	0/1:7,12:20:3.60:288,0,4	1/1:29,0:29:21.07:486,21,0	1/1:7,13:21:27.09:687,27,0	1/1:7,14:22:30.10:872,30,0	0/0:23,0:26:54.19:0,54,2184	0/1:14,0:14:99:188,0,107	1/1:19,5:24:11.29:366,11,0	1/1:17,15:33:14.86:217,15,0	0/1:25,0:23:19.35:37,0,19	0/1:30,0:30:8.04:259,0,8	1/1:3,14:17:5.64:120,6,0	1/1:9,4:13:3.01:89,3,0	1/1:9,0:21:10.52:161,11,0	1/1:17,0:35:4.45:625,4,0	1/1:6,13:19:20.67:576,21,0	1/1:6,0:10:6.02:140,6,0
chr10	88462148	.	GTGTGTGTGTGTGTGTGTA	G	3079.24	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=5.734;DP=654;FS=3.547;HRun=0;HaplotypeScore=261.8605;InbreedingCoeff=0.5896;MQ=52.36;MQ0=22;MQRankSum=-7.117;QD=13.27;ReadPosRankSum=5.164;VQSLOD=1.8350;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:77.16:0,77,3634	0/0:8,0:8:15.05:0,15,1079	0/0:7,0:3:8.88:0,9,72	0/0:20,0:5:7.83:0,8,75	1/1:32,0:32:7.08:218,7,0	1/1:25,1:25:21.07:704,21,0	1/1:24,0:22:8.90:208,9,0	0/1:29,0:24:13.09:13,0,713	0/0:17,0:17:21.52:0,22,534	0/0:20,0:20:54.10:0,54,2367	0/0:28,0:27:63.10:0,63,3395	0/1:22,0:22:5.88:452,0,6	0/0:21,0:21:20.68:0,21,436	1/1:33,1:34:21.07:755,21,0	0/0:24,0:23:42.97:0,43,757	0/0:26,0:26:49.69:0,50,1033	0/0:27,0:26:64.05:0,64,3935	0/1:16,0:15:71.72:343,0,72	0/0:21,0:19:41.29:0,41,741	0/0:34,0:34:56.83:0,57,894	0/0:28,0:25:36.05:0,36,694	1/1:29,2:31:24.99:553,25,0	0/0:24,0:24:24:0,24,568	0/0:18,0:17:16.79:0,17,203	0/1:18,0:18:11.20:11,0,170	0/0:28,0:27:53.62:0,54,861	0/0:22,0:21:39.55:0,40,642	0/0:17,0:14:13.72:0,14,346
chr10	88462150	.	GTGTGTGTGTGTGTGTA	G	5096.18	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=6.977;DP=644;FS=10.397;HRun=0;HaplotypeScore=234.6918;InbreedingCoeff=0.5583;MQ=52.52;MQ0=22;MQRankSum=-8.176;QD=17.39;ReadPosRankSum=6.132;VQSLOD=2.1753;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:75.11:0,75,3165	0/0:8,0:8:15.05:0,15,946	0/0:7,0:3:5.88:0,6,42	0/0:19,0:4:4.56:0,5,35	1/1:1,30:31:18.53:501,19,0	1/1:3,23:25:21.07:942,21,0	1/1:3,21:22:8.90:294,9,0	0/1:30,0:25:18.61:19,0,505	0/0:17,0:17:21.50:0,22,388	0/0:19,0:19:54.13:0,54,2029	0/0:27,0:26:63.13:0,63,2975	1/1:1,22:23:15.05:697,15,0	0/1:20,0:20:5.02:5,0,254	1/1:3,31:34:21.07:937,21,0	0/0:23,0:22:18:0,18,468	0/0:24,0:24:25.77:0,26,646	0/0:28,0:27:67.03:0,67,3538	1/1:12,3:14:41.61:653,42,0	0/0:18,0:17:14.12:0,14,490	0/0:36,0:36:37.77:0,38,696	0/0:27,0:24:11.53:0,12,371	1/1:5,26:31:20.63:772,21,0	0/0:25,0:25:27.03:0,27,422	0/0:19,0:18:16.87:0,17,156	0/1:17,0:17:35.57:36,0,111	0/1:26,0:25:99:192,0,380	0/0:22,0:21:35.97:0,36,361	0/1:16,0:13:48.94:49,0,220
chr10	88462158	.	GTGTGTGTA	G	3852.38	PASS	AB=0.964;AC=24;AF=0.429;AN=56;BaseQRankSum=13.463;DP=625;FS=27.870;HRun=0;HaplotypeScore=172.7670;InbreedingCoeff=0.0708;MQ=53.73;MQ0=21;MQRankSum=-11.177;QD=9.47;ReadPosRankSum=9.693;VQSLOD=0.4661;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:71.69:0,72,1643	0/0:9,0:9:18.03:0,18,524	0/0:7,0:3:5.86:0,6,37	0/0:15,0:2:3.48:0,3,32	1/1:30,0:30:17.71:196,18,0	1/1:26,0:25:21.07:432,21,0	1/1:24,0:22:8.90:143,9,0	0/0:29,0:24:68.52:0,69,583	0/1:6,10:16:17.19:244,0,17	0/0:15,0:15:42.69:0,43,868	0/0:25,0:24:57.11:0,57,1540	1/1:22,0:22:15.05:319,15,0	0/1:21,0:21:99:102,0,119	1/1:34,0:34:21.07:447,21,0	0/1:24,0:23:99:249,0,136	0/1:24,0:24:99:332,0,120	0/0:28,0:27:63.14:0,63,1856	0/1:15,0:14:52.17:287,0,52	0/1:16,0:15:93.89:94,0,151	0/0:31,0:31:6.29:0,6,293	0/0:27,0:24:20.64:0,21,218	1/1:30,0:30:26.58:329,27,0	0/1:25,0:25:10.65:11,0,185	0/1:16,0:15:21.78:22,0,100	0/1:17,0:17:59.14:59,0,69	0/1:27,0:26:99:261,0,229	0/1:21,1:21:99:268,0,106	0/1:18,0:15:59.46:59,0,132
chr10	88462657	.	CT	C	8241.39	PASS	AB=0.900;AC=33;AF=0.589;AN=56;BaseQRankSum=12.099;DP=562;FS=4.830;HRun=9;HaplotypeScore=75.6116;InbreedingCoeff=0.9302;MQ=69.87;MQ0=1;MQRankSum=0.666;QD=22.70;ReadPosRankSum=4.126;VQSLOD=5.7346;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39.12:0,39,450	0/1:8,1:9:3.40:3,0,218	0/0:15,0:14:29.07:0,29,299	0/0:10,0:8:5.11:0,5,73	1/1:2,28:30:81.04:741,81,0	1/1:1,24:25:69.03:631,69,0	1/1:2,11:13:27.01:247,27,0	0/0:31,0:30:78.21:0,78,883	1/1:0,15:15:42.02:384,42,0	0/0:19,0:19:45.12:0,45,506	0/0:24,0:24:63.18:0,63,718	1/1:2,12:14:36.02:330,36,0	1/1:1,24:25:63.03:577,63,0	1/1:2,11:13:30.01:275,30,0	1/1:3,18:21:48.02:439,48,0	1/1:1,21:22:54.03:494,54,0	0/0:12,0:12:24.07:0,24,277	1/1:2,28:31:78.89:698,79,0	1/1:2,15:17:44.99:402,45,0	1/1:1,33:34:89.95:812,90,0	0/0:6,0:6:18.05:0,18,208	1/1:5,23:28:37.38:589,37,0	1/1:1,24:25:66.04:604,66,0	1/1:1,15:16:39.02:357,39,0	0/0:15,0:29:63.19:0,63,419	0/0:28,0:28:81.24:0,81,935	1/1:0,25:25:72.04:659,72,0	0/0:10,0:10:30.05:0,30,322
chr10	88465955	.	G	GA	4916.72	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-13.348;DP=505;FS=9.169;HRun=7;HaplotypeScore=47.5055;InbreedingCoeff=0.9750;MQ=81.93;MQ0=0;MQRankSum=0.261;QD=28.92;ReadPosRankSum=2.725;VQSLOD=5.1599;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.08:0,51,492	0/0:5,0:5:15.02:0,15,145	0/0:20,0:20:37.86:0,38,397	0/0:11,0:11:12.86:0,13,181	0/0:13,0:13:39.05:0,39,371	0/0:24,0:24:66.09:0,66,632	0/0:17,0:17:48.05:0,48,453	0/0:38,0:38:96.13:0,96,922	0/0:21,0:21:60.08:0,60,574	0/0:19,0:19:54.08:0,54,518	0/0:14,0:14:39.05:0,39,374	0/0:12,0:12:27.02:0,27,254	1/1:1,20:21:54.17:652,54,0	0/0:13,0:13:33.02:0,33,308	1/1:4,13:17:36.11:435,36,0	1/1:0,16:16:42.13:507,42,0	0/0:20,0:20:51.07:0,51,492	0/0:26,0:26:72.11:0,72,694	1/1:1,15:16:45.10:509,45,0	1/1:5,19:24:51.16:616,51,0	0/0:14,0:14:36.05:0,36,348	0/0:10,0:10:27.04:0,27,260	1/1:2,14:17:39.12:471,39,0	1/1:1,23:24:66.20:797,66,0	0/0:10,0:10:27.04:0,27,260	0/0:26,0:26:69.07:0,69,651	1/1:2,33:35:78.21:928,78,0	0/0:3,0:3:5.97:0,6,49
chr10	88467697	.	TA	T	744.10	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.648;DP=617;FS=1.856;HRun=1;HaplotypeScore=73.5029;InbreedingCoeff=0.9953;MQ=78.94;MQ0=1;MQRankSum=-3.327;QD=37.21;ReadPosRankSum=0.075;VQSLOD=3.9657;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.33:0,96,1527	0/0:7,0:7:21.03:0,21,286	0/0:21,0:21:43.47:0,43,892	0/0:15,0:15:45.13:0,45,687	0/0:27,0:27:78.24:0,78,1200	0/0:27,0:26:75.18:0,75,1120	0/0:25,0:25:75.15:0,75,1167	0/0:27,0:27:78.24:0,78,1203	0/0:22,0:22:66.23:0,66,1052	0/0:24,0:24:69.23:0,69,1083	0/0:24,0:24:72.22:0,72,1111	0/0:21,0:20:57.18:0,57,878	0/0:25,0:25:75.18:0,75,1103	0/0:24,0:24:72.23:0,72,1121	0/0:24,0:24:72.25:0,72,1151	0/0:17,0:17:51.17:0,51,815	0/0:27,0:27:81.28:0,81,1294	0/0:20,0:20:57.19:0,57,911	0/0:25,0:25:75.26:0,75,1193	0/0:33,0:33:99:0,99,1536	0/0:17,0:17:51.14:0,51,768	0/0:21,0:21:63.18:0,63,958	0/0:26,0:26:72.23:0,72,1127	0/0:10,0:10:30.10:0,30,479	1/1:0,20:20:60.20:839,60,0	0/0:17,0:17:51.17:0,51,794	0/0:25,0:25:75.24:0,75,1174	0/0:13,0:13:39.12:0,39,599
chr10	88469786	.	C	CACAG	1882.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.255;DP=705;FS=0.000;HRun=0;HaplotypeScore=112.2101;InbreedingCoeff=0.9996;MQ=78.51;MQ0=0;MQRankSum=-3.972;QD=67.25;ReadPosRankSum=0.188;VQSLOD=5.6794;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,1806	0/0:15,0:15:42.12:0,42,725	0/0:18,0:18:39.13:0,39,703	0/0:20,0:20:43.66:0,44,737	0/0:27,0:27:78.08:0,78,1434	0/0:24,0:24:69.24:0,69,1257	0/0:22,0:22:54.17:0,54,965	0/0:27,0:27:63.21:0,63,1095	0/0:23,0:23:66.23:0,66,1213	0/0:30,0:30:75.26:0,75,1358	0/0:16,0:16:48.16:0,48,883	0/0:23,0:23:60.19:0,60,1037	0/0:29,0:29:78.25:0,78,1379	0/0:34,0:34:96.33:0,96,1757	0/0:31,0:31:87.30:0,87,1567	0/0:32,0:32:93.32:0,93,1687	0/0:32,0:32:93.32:0,93,1711	0/0:20,0:20:60.21:0,60,1103	0/0:20,0:20:57.19:0,57,1001	0/0:20,0:20:57.19:0,57,1021	0/0:22,0:22:60.04:0,60,1063	0/0:28,0:28:84.28:0,84,1479	0/0:26,0:26:75.26:0,75,1368	0/0:38,0:38:99:0,102,1844	1/1:1,27:28:75.26:1978,75,0	0/0:30,0:30:90.31:0,90,1654	0/0:22,0:21:57.65:0,58,1005	0/0:12,0:12:33.11:0,33,604
chr10	88469970	.	C	CT	7926.44	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-15.510;DP=744;FS=0.984;HRun=2;HaplotypeScore=65.7523;InbreedingCoeff=0.9991;MQ=88.06;MQ0=0;MQRankSum=-7.140;QD=38.48;ReadPosRankSum=3.431;VQSLOD=5.4058;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,1770	0/0:12,0:12:36.11:0,36,446	0/0:31,0:31:81.25:0,81,961	0/0:23,0:23:57.15:0,57,681	1/1:1,28:29:69.19:970,69,0	1/1:0,32:32:90.30:1296,90,0	1/1:0,28:28:81.27:1167,81,0	0/0:31,0:31:81.25:0,81,1004	1/1:0,29:29:78.26:1123,78,0	0/0:26,0:26:78.25:0,78,967	0/0:14,0:14:36.11:0,36,445	1/1:1,15:16:42.14:605,42,0	0/0:28,0:28:84.26:0,84,1041	1/1:1,28:29:75.25:1080,75,0	0/0:38,0:38:99:0,108,1274	0/0:21,1:22:19.98:0,20,701	0/0:28,0:28:81.22:0,81,975	1/1:3,19:22:54.18:777,54,0	0/0:34,0:33:96.28:0,96,1167	0/0:36,0:36:99:0,105,1289	0/0:26,0:26:75.24:0,75,929	1/1:0,21:21:63.21:907,63,0	0/0:17,0:17:45.12:0,45,544	0/0:33,0:33:96.27:0,96,1163	0/0:20,0:20:60.19:0,60,744	0/0:30,0:30:87.27:0,87,1079	0/0:24,0:24:69.22:0,69,855	0/0:15,0:15:45.12:0,45,543
chr10	88470336	.	CT	C	4567.20	PASS	AB=0.773;AC=33;AF=0.589;AN=56;BaseQRankSum=11.288;DP=510;FS=23.104;HRun=10;HaplotypeScore=53.6139;InbreedingCoeff=0.7633;MQ=58.65;MQ0=2;MQRankSum=-0.038;QD=15.53;ReadPosRankSum=4.128;VQSLOD=3.5122;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,2:51:99:0,117,1228	0/0:8,0:8:12.02:0,12,124	0/1:8,1:6:17.03:17,0,54	0/1:9,2:8:24.05:40,0,24	1/1:9,9:17:20.94:180,21,0	1/1:1,14:15:35.99:312,36,0	1/1:0,17:17:41.99:365,42,0	0/0:32,1:33:25.03:0,25,474	1/1:2,12:14:29.99:260,30,0	0/0:11,0:11:21.04:0,21,217	0/0:15,1:16:19.06:0,19,433	1/1:2,11:13:26.99:234,27,0	1/1:3,9:12:26.99:234,27,0	1/1:5,14:19:32.98:286,33,0	1/1:4,16:20:35.98:313,36,0	1/1:3,13:16:32.98:286,33,0	0/0:39,2:41:53.19:0,53,1024	1/1:8,20:28:44.98:390,45,0	1/1:1,11:11:26.99:233,27,0	1/1:4,10:14:26.93:227,27,0	0/0:10,0:10:24.04:0,24,249	1/1:3,8:11:17.98:156,18,0	1/1:2,16:18:38.89:338,39,0	0/1:4,12:16:27.37:247,0,27	0/0:17,1:18:13.04:0,13,361	0/0:21,0:22:50.96:0,51,538	1/1:10,21:31:34.69:446,35,0	0/0:5,0:5:12.03:0,12,133
chr10	88470504	.	T	TAC	11810.86	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-3.403;DP=529;FS=11.349;HRun=0;HaplotypeScore=103.8515;InbreedingCoeff=0.9510;MQ=76.63;MQ0=3;MQRankSum=-7.440;QD=46.32;ReadPosRankSum=3.445;VQSLOD=5.8236;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,1529	0/0:2,0:2:6.02:0,6,91	0/0:20,0:16:42.09:0,42,553	0/0:30,0:23:68.35:0,68,928	1/1:1,7:8:21.07:406,21,0	1/1:1,14:14:30.05:578,30,0	1/1:3,17:20:45.15:864,45,0	0/0:24,0:24:66.17:0,66,961	1/1:4,12:16:39.13:753,39,0	0/0:34,0:34:96.33:0,96,1463	0/0:16,0:16:42.14:0,42,642	1/1:1,16:17:42.14:810,42,0	1/1:1,9:10:0.70:327,1,0	1/1:1,12:13:36.12:694,36,0	1/1:2,20:22:57.20:1099,57,0	1/1:0,25:24:63.22:1216,63,0	0/0:32,0:32:96.33:0,96,1470	1/1:1,10:11:30.10:562,30,0	1/1:1,9:10:27.09:521,27,0	1/1:0,16:15:42.14:811,42,0	0/0:24,0:24:57.19:0,57,871	1/1:2,15:17:39.13:753,39,0	1/1:4,16:20:44.68:866,45,0	1/1:3,20:23:53.90:993,54,0	0/0:24,0:24:66.22:0,66,1010	0/0:18,0:18:54.18:0,54,839	1/1:2,10:12:30.10:558,30,0	0/0:13,0:13:39.13:0,39,588
chr10	88470523	.	AAC	A	378.12	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-0.207;DP=561;FS=3.356;HRun=0;HaplotypeScore=155.0866;InbreedingCoeff=0.3474;MQ=58.96;MQ0=13;MQRankSum=1.460;QD=10.50;ReadPosRankSum=1.684;VQSLOD=3.6722;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:37:34.08:0,34,974	0/0:2,0:2:6.02:0,6,94	0/0:32,0:10:12.01:0,12,163	0/0:34,0:17:15.02:0,15,176	0/0:15,0:15:5.01:0,5,63	0/0:15,0:15:5.91:0,6,45	0/0:27,0:27:9.66:0,10,108	0/0:18,0:24:44.79:0,45,457	0/0:15,0:20:15.44:0,15,124	0/0:25,0:25:42.13:0,42,638	0/1:13,0:13:5.05:5,0,393	0/0:14,0:14:4.33:0,4,63	0/0:10,0:11:6.92:0,7,38	0/0:14,0:13:9.42:0,9,80	0/0:21,0:22:7.83:0,8,74	0/0:19,0:20:28.79:0,29,218	0/0:30,2:32:39.76:0,40,995	0/0:14,0:14:20.78:0,21,159	0/0:9,0:7:11.87:0,12,102	0/0:22,0:21:12.01:0,12,146	0/0:9,0:30:41.99:0,42,369	0/0:17,0:17:5.98:0,6,58	0/0:16,0:18:12.79:0,13,89	0/0:26,0:27:5.75:0,6,53	1/1:7,15:23:41.96:471,42,0	0/0:5,0:18:41.89:0,42,354	0/0:14,0:15:14.44:0,14,111	0/0:4,0:9:20.99:0,21,182
chr10	88470548	.	ATG	A	494.88	PASS	AB=0.885;AC=9;AF=0.161;AN=56;BaseQRankSum=7.093;DP=542;FS=19.256;HRun=0;HaplotypeScore=136.4918;InbreedingCoeff=-0.2025;MQ=56.98;MQ0=11;MQRankSum=0.246;QD=3.26;ReadPosRankSum=-4.418;VQSLOD=-0.0775;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:86.09:0,86,1451	0/0:5,0:5:15.05:0,15,235	0/0:28,0:12:28.93:0,29,464	0/0:35,0:19:26.70:0,27,797	0/0:17,0:17:26.09:0,26,431	0/0:16,0:16:3.02:0,3,329	0/1:22,3:25:99:118,0,373	0/0:24,0:24:27.71:0,28,1014	0/1:14,2:16:4.44:4,0,179	0/0:18,0:18:51.17:0,51,974	0/0:12,0:12:35.90:0,36,564	0/1:20,1:21:77.88:78,0,373	0/1:9,3:12:24.86:25,0,221	0/1:11,0:10:84.63:85,0,129	0/1:18,3:21:62.31:62,0,207	0/1:11,6:17:99:156,0,189	0/0:33,0:33:88.99:0,89,1568	0/0:14,0:14:33.52:0,34,535	0/0:14,0:11:32.32:0,32,483	0/0:21,1:21:10.01:0,10,480	0/0:34,0:33:69.21:0,69,904	0/0:9,0:9:6.02:0,6,98	0/1:14,4:17:38.43:38,0,279	0/0:22,3:25:14.78:0,15,185	0/0:20,0:19:46.31:0,46,325	0/0:19,0:19:57.16:0,57,710	0/1:11,0:11:65.27:65,0,217	0/0:8,1:9:24.07:0,24,296
chr10	88470708	.	TTGTG	T	3765.64	PASS	AB=0.806;AC=36;AF=0.692;AN=52;BaseQRankSum=8.643;DP=532;FS=15.827;HRun=0;HaplotypeScore=113.6387;InbreedingCoeff=0.6724;MQ=65.70;MQ0=13;MQRankSum=-2.823;QD=10.88;ReadPosRankSum=3.987;VQSLOD=1.9704;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:42.09:0,42,755	0/0:7,0:7:15.05:0,15,355	./.	0/0:20,0:13:3.01:0,3,43	1/1:8,7:15:8.51:261,9,0	1/1:7,10:17:21.07:331,21,0	1/1:12,7:19:17.95:265,18,0	1/1:15,4:19:9.08:140,9,0	0/0:8,0:17:16.47:0,16,73	0/0:25,0:25:45.14:0,45,863	0/0:14,0:14:29.91:0,30,519	1/1:9,7:15:9.03:142,9,0	1/1:9,0:18:30.04:298,30,0	./.	1/1:14,0:24:21.02:195,21,0	1/1:14,0:20:5.46:127,5,0	0/0:34,0:34:54.16:0,54,1145	1/1:10,15:25:30.10:474,30,0	1/1:13,0:20:12.01:112,12,0	1/1:7,0:13:18.02:167,18,0	1/1:19,12:30:18.06:284,18,0	1/1:3,7:11:12.03:170,12,0	1/1:4,0:12:21.02:195,21,0	1/1:11,0:18:6.01:56,6,0	0/1:14,1:16:14.51:15,0,575	0/1:16,10:26:99:364,0,113	1/1:11,0:16:3:28,3,0	1/1:2,4:5:9.03:142,9,0
chr10	88470928	.	TA	T	4216.48	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=8.501;DP=577;FS=9.394;HRun=8;HaplotypeScore=67.4850;InbreedingCoeff=0.9929;MQ=69.35;MQ0=0;MQRankSum=1.102;QD=24.66;ReadPosRankSum=2.329;VQSLOD=5.4797;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1177	0/0:9,0:9:24.07:0,24,290	0/0:10,0:10:15.86:0,16,183	0/0:12,0:12:18.38:0,18,201	0/0:32,0:32:90.25:0,90,1066	0/0:19,0:19:54.17:0,54,652	0/0:27,0:27:63.17:0,63,738	0/0:44,0:44:99:0,117,1384	0/0:18,0:18:51.13:0,51,591	0/0:23,0:23:60.18:0,60,725	0/0:13,0:13:39.12:0,39,471	0/0:23,0:23:66.20:0,66,797	1/1:1,20:20:51.08:492,51,0	0/0:22,0:22:57.17:0,57,689	1/1:2,19:21:51.08:492,51,0	1/1:3,15:18:45.07:435,45,0	0/0:21,0:21:54.15:0,54,631	0/0:19,0:19:51.09:0,51,585	1/1:2,25:27:75.09:712,75,0	1/1:2,26:28:75.11:724,75,0	0/0:8,0:8:21.05:0,21,241	0/0:20,0:20:60.18:0,60,724	1/1:2,19:21:51.08:493,51,0	1/1:2,16:18:45.07:435,45,0	0/0:1,0:22:43.09:0,43,219	0/0:23,0:23:54.14:0,54,631	1/1:2,15:17:45.07:433,45,0	0/0:5,0:5:15.05:0,15,181
chr10	88472631	.	C	CGTGTGT	1153.01	PASS	AB=0.857;AC=13;AF=0.232;AN=56;BaseQRankSum=3.988;DP=622;FS=8.142;HRun=0;HaplotypeScore=136.8518;InbreedingCoeff=0.6587;MQ=66.79;MQ0=19;MQRankSum=-2.757;QD=7.79;ReadPosRankSum=-1.306;VQSLOD=1.9448;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:36:75.17:0,75,1249	0/0:8,0:8:24.07:0,24,418	0/0:35,0:21:62.43:0,62,996	0/0:31,0:22:65.54:0,66,1042	0/1:25,0:24:1.43:171,0,1	1/1:10,1:22:0.25:82,0,0	0/1:4,0:16:1.96:72,0,2	0/0:27,0:27:73.59:0,74,1102	1/1:15,1:13:8.87:256,9,0	0/0:30,0:30:86.93:0,87,1535	0/0:17,0:17:45.12:0,45,794	1/1:5,16:21:5.97:286,6,0	0/0:16,0:16:41.82:0,42,602	1/1:4,12:15:2.27:93,2,0	0/0:24,0:24:50.97:0,51,743	0/0:24,0:24:65.81:0,66,1038	0/0:31,0:31:90.24:0,90,1721	1/1:3,4:5:7.27:192,7,0	0/0:18,0:17:48.12:0,48,726	0/0:17,0:16:37.05:0,37,593	0/0:31,0:31:81.22:0,81,1644	0/1:22,0:20:6.45:156,0,6	0/0:17,0:17:37.04:0,37,582	0/0:22,0:22:54.18:0,54,947	0/0:24,0:23:54.14:0,54,916	0/0:27,0:27:78.23:0,78,1434	0/0:21,0:21:60.14:0,60,807	0/0:15,0:14:39.13:0,39,808
chr10	88472632	.	C	CTG	1812.03	PASS	AB=0.834;AC=26;AF=0.481;AN=54;BaseQRankSum=-1.517;DP=665;FS=4.798;HRun=0;HaplotypeScore=104.7313;InbreedingCoeff=0.2192;MQ=65.40;MQ0=20;MQRankSum=0.337;QD=4.55;ReadPosRankSum=0.791;VQSLOD=1.8638;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:37:22.88:0,23,103	0/0:6,0:7:5.85:0,6,47	./.	0/1:32,0:22:0:0,0,0	1/1:28,0:27:5.17:20,5,0	1/1:26,0:25:5.61:55,6,0	1/1:18,0:18:4.55:31,5,0	0/0:28,0:29:13.42:0,13,96	1/1:19,0:16:16.02:130,16,0	0/0:27,0:30:23.71:0,24,213	0/0:18,0:18:17.63:0,18,175	1/1:26,0:24:9:79,9,0	0/1:14,2:16:14.90:171,0,15	1/1:18,0:17:3:26,3,0	0/1:17,8:26:29.69:120,0,30	0/1:15,9:26:35.69:311,0,36	0/0:30,0:33:42.26:0,42,423	0/1:8,0:6:4.93:43,0,5	0/1:21,0:20:35.77:36,0,57	0/1:12,5:17:11.81:203,0,12	0/0:28,0:32:44.51:0,45,396	1/1:25,0:23:17.01:118,17,0	0/1:12,5:17:35.93:36,0,57	0/1:15,7:25:84.73:197,0,85	0/1:16,7:26:99:144,0,173	0/0:22,0:26:20.54:0,21,166	1/1:14,8:22:18.06:270,18,0	0/0:15,0:14:21.04:0,21,221
chr10	88472800	.	TGTCATCAGCATCAGCATC	T	9273.45	PASS	AB=0.643;AC=15;AF=0.268;AN=56;BaseQRankSum=12.959;DP=674;FS=9.459;HRun=0;HaplotypeScore=300.0550;InbreedingCoeff=0.8794;MQ=74.01;MQ0=0;MQRankSum=-11.728;QD=56.20;ReadPosRankSum=3.800;VQSLOD=3.0992;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:62.78:0,63,4273	0/0:10,0:10:30.10:0,30,1979	0/0:36,0:35:66.23:0,66,3555	0/0:25,0:24:53.21:0,53,2724	1/1:5,21:26:48.16:1931,48,0	1/1:5,21:26:33.11:1642,33,0	1/1:5,7:12:9.03:388,9,0	0/0:34,0:34:78.27:0,78,4109	1/1:2,19:20:24.08:1194,24,0	0/0:26,0:26:72.25:0,72,5102	0/0:20,0:19:51.18:0,51,3473	1/1:8,17:24:24.08:1194,24,0	0/0:24,0:24:57.20:0,57,4303	1/1:5,18:23:21.07:1045,21,0	0/0:33,0:33:87.30:0,87,6441	0/0:40,0:40:99:0,105,7780	0/0:22,0:22:60.21:0,60,5050	0/1:4,5:9:99:290,0,105	0/0:20,0:20:45.15:0,45,2662	0/0:24,0:24:54.19:0,54,3793	0/0:44,0:44:99:0,114,7682	1/1:5,18:23:36.08:1589,36,0	0/0:22,0:22:54.19:0,54,3818	0/0:25,0:25:66.23:0,66,5058	0/0:20,0:20:54.19:0,54,4222	0/0:20,0:20:48.16:0,48,3734	0/0:25,0:25:72.21:0,72,5280	0/0:5,0:5:6.02:0,6,515
chr10	88473459	.	CAT	C	1726.95	PASS	AB=0.919;AC=18;AF=0.321;AN=56;BaseQRankSum=9.987;DP=282;FS=2.248;HRun=0;HaplotypeScore=36.7473;InbreedingCoeff=0.6690;MQ=79.23;MQ0=1;MQRankSum=-0.470;QD=17.62;ReadPosRankSum=1.718;VQSLOD=3.4649;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:9.03:0,9,145	0/0:6,0:6:18.06:0,18,299	0/0:9,0:4:3.01:0,3,48	0/1:14,1:11:22.47:75,0,22	1/1:4,12:16:27:320,27,0	1/1:2,13:15:39.12:492,39,0	1/1:1,6:7:15.05:189,15,0	0/0:39,1:40:70.49:0,70,1675	1/1:3,6:9:15.05:189,15,0	0/1:8,1:9:13.79:14,0,325	0/0:11,0:11:15.05:0,15,249	1/1:0,3:3:6.02:76,6,0	0/0:5,0:5:12.04:0,12,200	1/1:1,5:6:9.03:114,9,0	0/0:5,0:5:12.03:0,12,175	0/0:2,0:2:6.02:0,6,100	0/0:10,0:10:24.06:0,24,369	1/1:3,11:14:30.10:375,30,0	0/0:11,0:11:24.08:0,24,394	0/0:7,0:7:18.06:0,18,299	0/0:7,0:7:18.04:0,18,273	1/1:2,2:4:6.02:76,6,0	0/0:7,0:7:9.03:0,9,146	0/0:6,0:6:3.01:0,3,50	0/0:12,0:12:33.11:0,33,549	0/0:14,0:14:33.11:0,33,547	0/0:20,0:20:27.05:0,27,410	0/0:2,0:2:3.01:0,3,50
chr10	88473562	.	C	CT	3549.54	PASS	AC=26;AF=0.481;AN=54;BaseQRankSum=-1.909;DP=307;FS=1.861;HRun=8;HaplotypeScore=45.8167;InbreedingCoeff=0.9359;MQ=71.75;MQ0=0;MQRankSum=-0.205;QD=22.90;ReadPosRankSum=-1.653;VQSLOD=3.4541;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:36.02:0,36,329	0/0:7,0:7:21.01:0,21,192	./.	0/0:8,0:8:9:0,9,82	0/0:13,0:13:32.99:0,33,298	0/0:16,0:16:48.03:0,48,439	0/0:5,0:5:11.99:0,12,110	1/1:8,28:36:78.22:890,78,0	1/1:2,5:7:15.04:173,15,0	0/0:14,0:14:36.02:0,36,329	0/0:16,0:16:42.02:0,42,384	0/0:2,0:2:6:0,6,55	1/1:4,0:4:5.85:35,6,0	0/0:7,0:7:20.99:0,21,185	1/1:7,0:7:17.58:107,18,0	1/1:6,0:6:14.58:85,15,0	0/0:16,0:16:42.02:0,42,384	0/0:14,0:14:42.02:0,42,384	1/1:14,0:14:37.18:197,37,0	1/1:15,0:15:43.87:263,44,0	1/1:0,7:7:18.05:208,18,0	0/0:3,0:3:9:0,9,82	1/1:9,0:9:17.56:106,18,0	1/1:5,0:5:14.66:89,15,0	0/0:0,0:17:32.59:0,33,96	1/1:0,19:19:57.17:658,57,0	1/1:8,0:8:20.34:117,20,0	1/1:0,18:17:54.16:623,54,0
chr10	88473570	.	T	TA	2889.31	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=0.805;DP=323;FS=4.437;HRun=1;HaplotypeScore=47.1233;InbreedingCoeff=0.4924;MQ=68.83;MQ0=0;MQRankSum=-0.422;QD=14.74;ReadPosRankSum=-1.178;VQSLOD=2.6259;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:36.12:0,36,465	0/0:8,0:8:21.07:0,21,272	0/1:2,0:2:0.81:1,0,32	0/0:6,0:6:12.02:0,12,141	0/1:15,0:15:12.21:60,0,12	0/0:17,0:17:3.95:0,4,43	0/1:5,0:5:6.73:16,0,7	0/1:37,0:37:99:108,0,157	0/1:9,0:9:22.46:22,0,80	0/0:13,0:13:39.12:0,39,488	0/0:15,0:15:45.14:0,45,568	0/0:2,0:2:2.80:0,3,7	1/1:0,5:5:6.02:85,6,0	0/0:7,0:7:8.84:0,9,28	1/1:0,9:9:18.06:255,18,0	1/1:1,5:6:15.05:212,15,0	0/0:15,0:15:42.14:0,42,542	0/0:14,0:14:22.09:0,22,61	1/1:0,14:14:39:552,39,0	1/1:0,15:15:45.15:636,45,0	1/1:7,0:7:15.37:58,15,0	0/1:4,0:4:4.30:17,0,4	1/1:1,9:10:23.91:288,24,0	1/1:0,7:7:15.05:212,15,0	0/0:18,0:18:49.44:0,49,282	0/1:22,0:22:28.92:88,0,29	1/1:0,11:11:21.07:297,21,0	1/1:18,0:17:46.24:181,46,0
chr10	88474055	.	TTTTTG	T	1063.09	PASS	AB=0.962;AC=10;AF=0.179;AN=56;BaseQRankSum=10.689;DP=513;FS=2.969;HRun=0;HaplotypeScore=96.6133;InbreedingCoeff=0.1744;MQ=67.89;MQ0=3;MQRankSum=-4.462;QD=8.31;ReadPosRankSum=9.664;VQSLOD=0.4074;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:64.88:0,65,1317	0/0:5,0:5:12.02:0,12,215	0/0:42,0:18:52.99:0,53,609	0/0:16,0:11:22.83:0,23,253	0/0:24,0:24:72.14:0,72,1339	0/0:26,0:26:66.12:0,66,1407	0/0:15,0:15:23.54:0,24,808	0/0:22,0:22:54.05:0,54,794	0/0:16,0:16:45.16:0,45,699	0/0:22,0:22:60.11:0,60,1001	0/0:25,0:25:72.49:0,72,1254	0/0:17,0:17:51.10:0,51,897	0/1:19,1:20:99:189,0,142	0/0:21,0:21:42.02:0,42,713	0/1:21,1:22:99:191,0,138	1/1:14,1:15:0.55:140,1,0	0/0:14,0:14:33.04:0,33,624	0/0:19,0:19:53.94:0,54,856	0/1:9,1:10:92.78:93,0,98	0/1:18,0:18:69.15:157,0,69	0/0:10,0:10:27.07:0,27,405	0/0:17,0:17:45.03:0,45,707	0/1:11,0:11:49.76:65,0,50	1/1:11,0:11:20.25:133,20,0	0/0:28,0:27:36.03:0,36,575	0/0:17,0:17:51.11:0,51,799	0/1:20,1:21:94.05:242,0,94	0/0:5,0:5:15.01:0,15,199
chr10	88474872	.	A	ACT	4501.13	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=2.825;DP=651;FS=9.374;HRun=0;HaplotypeScore=111.5255;InbreedingCoeff=0.9725;MQ=65.44;MQ0=18;MQRankSum=0.577;QD=23.32;ReadPosRankSum=2.262;VQSLOD=5.0440;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:35.98:0,36,391	0/0:10,0:10:27.09:0,27,341	0/0:29,0:20:32.09:0,32,341	0/0:46,0:27:37.96:0,38,417	0/0:16,0:16:31.29:0,31,291	0/0:21,0:21:47.47:0,47,529	0/0:40,0:36:62.97:0,63,704	0/0:34,0:32:78.10:0,78,887	0/0:20,0:20:20.82:0,21,220	0/0:18,0:18:36.10:0,36,442	0/0:18,0:18:42.11:0,42,512	0/0:22,0:22:27.24:0,27,381	1/1:24,3:27:40.56:499,41,0	0/0:22,0:22:37.46:0,37,377	1/1:21,4:25:45.10:682,45,0	1/1:23,5:27:60.09:911,60,0	0/0:30,0:30:81.02:0,81,884	0/0:22,0:20:20.51:0,21,245	1/1:10,1:7:15.05:236,15,0	1/1:27,4:31:47.87:757,48,0	0/0:29,0:27:57.09:0,57,654	0/0:16,0:16:33.09:0,33,396	1/1:20,1:20:33.99:504,34,0	1/1:16,3:17:11.87:183,12,0	0/0:21,0:21:35.69:0,36,402	0/0:21,0:20:45.10:0,45,520	1/1:29,2:30:56.89:728,57,0	0/0:2,0:2:6.02:0,6,74
chr10	88474883	.	C	CCT	1728.77	PASS	AB=0.923;AC=31;AF=0.596;AN=52;BaseQRankSum=3.378;DP=670;FS=0.644;HRun=0;HaplotypeScore=137.9798;InbreedingCoeff=0.1275;MQ=58.93;MQ0=37;MQRankSum=1.009;QD=3.55;ReadPosRankSum=-0.550;VQSLOD=2.5754;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:11.08:55,0,11	0/0:13,0:15:1.34:0,1,130	./.	./.	0/1:18,0:17:10.26:158,0,10	0/1:20,0:20:51.75:118,0,52	0/1:41,0:36:60.75:61,0,75	1/1:38,0:35:5.95:42,6,0	0/0:23,0:23:11.46:0,11,63	0/1:16,0:14:4.96:5,0,89	0/0:21,0:21:20.91:0,21,169	0/1:13,11:25:21.49:79,0,21	1/1:21,0:21:19.19:143,19,0	0/1:12,8:22:41.24:102,0,41	1/1:26,0:25:11.79:82,12,0	1/1:33,0:32:27.51:197,28,0	0/0:31,0:30:53.21:0,53,389	0/1:23,0:18:3.35:198,0,3	1/1:16,0:11:16.95:116,17,0	1/1:33,0:32:12.16:98,12,0	0/0:30,0:27:0.02:0,0,121	1/1:14,0:16:3:25,3,0	1/1:23,0:20:6.88:51,7,0	1/1:20,0:18:3.92:28,4,0	1/1:20,0:19:7.30:122,7,0	0/1:20,0:19:13.49:88,0,13	1/1:31,0:28:25.51:125,26,0	0/0:5,0:5:2.99:0,3,24
chr10	88474917	.	TCTCACACA	T	992.25	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=6.016;DP=604;FS=0.000;HRun=0;HaplotypeScore=177.9714;InbreedingCoeff=-0.0678;MQ=49.37;MQ0=27;MQRankSum=-4.303;QD=3.79;ReadPosRankSum=1.547;VQSLOD=2.2227;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:32.99:0,33,598	0/0:19,0:19:17.74:0,18,797	0/0:9,0:5:15.05:0,15,432	0/0:9,0:6:13.59:0,14,298	0/0:28,0:27:50.87:0,51,1337	0/0:25,0:25:63.15:0,63,1541	0/0:33,0:28:53.70:0,54,1392	0/0:24,0:23:53.69:0,54,502	1/1:5,23:28:14.25:270,14,0	0/0:16,0:14:6.18:0,6,557	0/0:21,0:20:35.85:0,36,825	0/0:29,0:29:51.15:0,51,1213	0/1:20,0:20:99:150,0,123	0/0:23,0:23:36.12:0,36,1063	0/1:25,0:24:46.69:47,0,88	0/1:26,0:25:99:150,0,158	0/1:27,0:25:5.92:6,0,1134	0/0:19,0:15:35.58:0,36,1078	0/1:10,0:8:80.16:80,0,141	0/1:33,0:33:79.94:100,0,80	0/1:38,0:35:16.74:17,0,797	0/0:13,0:12:18.06:0,18,421	0/1:17,0:16:14.97:15,0,54	0/0:16,0:15:7.19:0,7,61	0/0:20,0:19:32.94:0,33,618	0/0:16,0:16:48.05:0,48,778	0/1:31,0:28:95.44:303,0,95	0/1:7,0:6:6.55:7,0,130
chr10	88474919	.	TCACACACACA	T	1868.78	PASS	AB=0.758;AC=10;AF=0.179;AN=56;BaseQRankSum=6.540;DP=602;FS=7.784;HRun=0;HaplotypeScore=189.3565;InbreedingCoeff=0.2134;MQ=49.31;MQ0=28;MQRankSum=-6.871;QD=9.99;ReadPosRankSum=2.818;VQSLOD=1.8191;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:27.04:0,27,972	0/0:19,0:19:36.12:0,36,1333	0/0:10,0:6:18.06:0,18,761	0/0:11,0:7:18.04:0,18,601	0/0:28,0:27:47.69:0,48,1834	0/0:24,0:24:51.18:0,51,2077	0/0:33,0:28:46.71:0,47,1843	0/0:25,0:24:60.18:0,60,1347	0/1:28,0:28:35.14:35,0,44	0/0:15,0:12:27.09:0,27,983	0/0:21,0:20:36.11:0,36,1246	0/0:29,0:29:45.15:0,45,1811	0/1:15,1:19:40.63:395,0,41	0/0:21,0:22:36.12:0,36,1539	1/1:9,8:24:2.01:172,2,0	1/1:12,4:24:0.35:326,0,0	0/0:29,0:27:50.96:0,51,1727	0/0:22,0:18:39.12:0,39,1448	0/1:7,0:9:43.19:236,0,43	0/1:12,14:31:4.65:218,0,5	0/0:36,0:33:63.07:0,63,1638	0/0:14,0:13:21.07:0,21,812	0/1:12,4:15:46.56:47,0,67	0/0:11,0:12:2.84:0,3,14	0/0:19,0:18:29.88:0,30,878	0/0:16,0:16:30.10:0,30,886	0/1:10,12:28:1.35:576,0,1	0/0:7,0:6:15.04:0,15,335
chr10	88477619	.	AT	A	3167.28	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=6.495;DP=539;FS=2.331;HRun=7;HaplotypeScore=62.0674;InbreedingCoeff=0.9955;MQ=75.66;MQ0=0;MQRankSum=-0.857;QD=24.74;ReadPosRankSum=1.192;VQSLOD=4.2483;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:57.17:0,57,704	0/0:9,0:9:24.08:0,24,302	0/0:13,0:13:27.04:0,27,316	0/0:8,0:8:15.05:0,15,189	1/1:2,27:29:72.16:735,72,0	1/1:1,22:23:63.14:643,63,0	1/1:2,15:17:42.10:428,42,0	0/0:20,0:20:42.13:0,42,528	0/0:16,0:16:45.14:0,45,564	0/0:28,0:28:78.25:0,78,981	0/0:35,0:35:90.25:0,90,1114	1/1:1,13:14:36.08:367,36,0	0/0:14,0:14:42.13:0,42,528	1/1:2,21:23:63.14:643,63,0	0/0:26,0:26:75.23:0,75,931	0/0:18,0:18:54.17:0,54,679	0/0:22,0:22:63.20:0,63,792	1/1:0,10:10:21.05:213,21,0	0/0:13,0:13:39.12:0,39,491	0/0:20,0:20:45.14:0,45,566	0/0:17,0:17:42.13:0,42,528	1/1:1,11:12:33.07:337,33,0	0/0:15,0:15:42.09:0,42,510	0/0:11,0:11:27.09:0,27,338	0/0:25,0:24:66.21:0,66,830	0/0:27,0:27:72.22:0,72,893	0/0:36,0:36:99:0,102,1283	0/0:15,0:15:36.12:0,36,453
chr10	88477940	.	GGCGTGTGTGT	G	6925.10	PASS	AB=0.913;AC=26;AF=0.464;AN=56;BaseQRankSum=-2.866;DP=607;FS=3.867;HRun=0;HaplotypeScore=177.5376;InbreedingCoeff=0.0921;MQ=57.50;MQ0=7;MQRankSum=-0.659;QD=16.77;ReadPosRankSum=2.727;VQSLOD=4.0379;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:56.67:0,57,1147	0/0:7,0:7:17.96:0,18,317	0/0:37,0:20:50.76:0,51,610	0/0:26,0:18:53.26:0,53,739	0/1:11,0:24:99:140,0,308	0/1:10,0:27:80.02:82,0,80	0/1:22,0:28:99:271,0,995	0/1:1,0:22:68.24:343,0,68	0/1:8,0:8:73.86:74,0,357	0/0:19,0:17:44.78:0,45,896	0/0:14,0:14:30.04:0,30,864	0/1:23,0:31:99:265,0,1305	1/1:12,8:22:59.63:1128,60,0	0/1:19,0:21:99:209,0,693	1/1:1,34:37:32.36:1066,32,0	0/1:1,3:34:24.07:749,0,24	0/0:30,0:30:83.62:0,84,2295	0/1:3,0:9:52.90:53,0,97	1/1:10,0:10:23.97:259,24,0	1/1:1,14:15:12.04:401,12,0	0/0:2,0:28:9.03:0,9,167	0/1:18,0:19:99:124,0,838	1/1:9,6:16:29.91:389,30,0	1/1:0,13:16:9.03:262,9,0	0/1:20,0:20:99:167,0,804	0/1:27,0:28:99:453,0,184	1/1:2,23:26:15.27:492,15,0	0/0:0,0:6:3.01:0,3,38
chr10	88477942	.	CGT	C	579.16	PASS	AB=0.958;AC=22;AF=0.440;AN=50;BaseQRankSum=8.654;DP=657;FS=5.624;HRun=0;HaplotypeScore=143.5989;InbreedingCoeff=0.5930;MQ=55.54;MQ0=8;MQRankSum=-7.452;QD=1.77;ReadPosRankSum=4.037;VQSLOD=1.8433;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,2:30:14.75:15,0,139	0/0:8,0:8:3.01:0,3,43	./.	./.	0/0:27,0:26:4.49:0,4,49	0/1:37,0:37:0.04:1,0,0	0/0:36,0:36:28.97:0,29,298	0/0:28,0:28:6.19:0,6,16	0/0:11,0:11:12.01:0,12,136	0/0:20,0:18:12.03:0,12,146	0/0:13,0:13:11.07:0,11,135	0/0:32,0:32:36:0,36,353	1/1:23,0:23:25.57:125,26,0	0/0:24,0:24:18.45:0,18,187	1/1:36,0:36:31.03:153,31,0	1/1:33,0:33:42.61:209,43,0	0/1:29,3:33:4.71:5,0,459	0/0:9,0:9:3:0,3,25	./.	1/1:14,0:14:11.36:55,11,0	1/1:29,0:28:5.66:28,6,0	0/0:26,0:26:22.49:0,22,213	1/1:18,0:17:5.68:28,6,0	1/1:16,0:16:8.52:42,9,0	0/0:25,0:25:21.05:0,21,274	0/1:27,0:27:3.23:10,0,3	1/1:25,0:25:13.87:69,14,0	1/1:6,0:6:2.84:14,3,0
chr10	88479059	.	C	CATCT	2536.63	PASS	AB=0.868;AC=24;AF=0.462;AN=52;BaseQRankSum=-0.943;DP=616;FS=2.653;HRun=0;HaplotypeScore=128.9301;InbreedingCoeff=0.7378;MQ=70.95;MQ0=5;MQRankSum=-3.114;QD=9.36;ReadPosRankSum=-1.955;VQSLOD=2.5153;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,8:24:9.03:210,9,0	0/0:6,0:6:6.02:0,6,92	./.	./.	0/0:29,0:29:42.09:0,42,578	0/1:16,8:25:74.02:262,0,74	1/1:13,2:16:6.02:140,6,0	1/1:48,0:48:32.48:207,32,0	0/0:28,0:27:36.07:0,36,482	0/0:28,0:29:39.10:0,39,521	0/0:26,0:26:27.06:0,27,369	0/0:8,0:8:18.05:0,18,255	1/1:14,0:23:3.01:52,3,0	0/0:16,0:17:30.06:0,30,388	1/1:14,18:32:36.12:841,36,0	0/0:26,0:26:48.11:0,48,651	0/0:24,0:24:51.06:0,51,665	1/1:8,0:9:8.99:83,9,0	0/0:15,0:21:21.02:0,21,192	0/0:17,0:37:35.89:0,36,335	1/1:9,0:8:2.97:20,3,0	0/0:18,0:18:24.03:0,24,304	1/1:5,11:17:12.51:281,13,0	1/1:4,5:9:12.04:280,12,0	1/1:26,0:27:12.96:144,13,0	0/1:16,0:16:7.59:96,0,8	0/0:21,0:34:29.95:0,30,279	1/1:15,0:15:14.95:117,15,0
chr10	88479082	.	CT	C	1574.20	PASS	AB=0.688;AC=4;AF=0.071;AN=56;BaseQRankSum=5.750;DP=608;FS=5.124;HRun=1;HaplotypeScore=96.1354;InbreedingCoeff=-0.0818;MQ=57.15;MQ0=16;MQRankSum=-1.655;QD=15.59;ReadPosRankSum=-0.581;VQSLOD=3.3616;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:21:0,21,474	0/0:8,0:8:24.08:0,24,366	0/0:14,0:4:6.02:0,6,80	0/0:13,0:8:17.37:0,17,205	0/0:32,0:32:96.31:0,96,1457	0/0:21,0:21:48.15:0,48,675	0/0:20,0:19:48.08:0,48,624	0/1:32,22:52:99:902,0,759	0/0:24,0:23:69.23:0,69,1084	0/0:28,0:26:77.28:0,77,1153	0/0:28,0:28:77.88:0,78,1164	0/0:9,0:9:27.09:0,27,422	0/0:27,0:27:57.16:0,57,805	0/0:16,0:16:46.71:0,47,703	0/0:27,0:27:63.15:0,63,754	0/0:21,0:21:63.21:0,63,991	0/0:28,0:27:72.22:0,72,1109	0/0:10,0:10:30.05:0,30,411	0/0:23,0:20:51.71:0,52,610	0/0:30,0:30:45.37:0,45,391	0/1:7,5:11:99:101,0,202	0/0:19,0:19:51.17:0,51,799	0/0:18,0:18:27.05:0,27,319	0/0:9,0:9:24.06:0,24,303	0/0:23,0:23:40.55:0,41,410	0/1:7,14:21:99:499,0,197	0/0:34,0:34:78.44:0,78,963	0/1:9,5:11:36.14:182,0,36
chr10	88479086	.	CT	C	250.70	PASS	AB=0.791;AC=2;AF=0.036;AN=56;BaseQRankSum=3.309;DP=602;FS=1.035;HRun=1;HaplotypeScore=100.2303;InbreedingCoeff=-0.0333;MQ=57.30;MQ0=16;MQRankSum=-0.012;QD=5.33;ReadPosRankSum=-0.073;VQSLOD=0.3169;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,1:24:2.87:3,0,438	0/0:8,0:8:24.06:0,24,346	0/0:13,0:5:8.99:0,9,108	0/0:14,1:9:23.95:0,24,277	0/0:32,0:32:96.33:0,96,1477	0/0:19,0:19:42.13:0,42,586	0/0:18,0:17:42.13:0,42,601	0/0:55,0:53:72.83:0,73,1262	0/0:23,0:22:66.22:0,66,1037	0/0:28,0:26:77.29:0,77,1170	0/0:26,0:26:74.87:0,75,1115	0/0:9,0:9:27.09:0,27,422	0/0:27,0:27:57.17:0,57,818	0/0:17,0:17:49.70:0,50,728	0/0:26,0:26:60.15:0,60,727	0/0:24,0:24:72.23:0,72,1101	0/0:27,0:26:69.21:0,69,1058	0/0:12,0:12:27.06:0,27,391	0/0:21,0:18:42.69:0,43,492	0/0:29,0:29:45.39:0,45,426	0/0:12,0:11:22.50:0,22,271	0/0:19,0:19:51.17:0,51,799	0/0:17,0:17:27.06:0,27,339	0/0:9,0:9:24.06:0,24,303	0/1:9,14:23:99:325,0,185	0/0:23,0:23:65.51:0,66,730	0/0:32,0:32:72.71:0,73,848	0/0:14,0:11:21.14:0,21,148
chr10	88479513	.	CCT	C	432.50	PASS	AB=0.918;AC=18;AF=0.321;AN=56;BaseQRankSum=3.023;DP=556;FS=1.488;HRun=0;HaplotypeScore=114.6078;InbreedingCoeff=0.2240;MQ=61.25;MQ0=4;MQRankSum=0.025;QD=1.83;ReadPosRankSum=0.837;VQSLOD=1.9411;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:22:33.21:0,33,630	1/1:4,0:4:5.68:28,6,0	0/0:30,0:20:15.05:0,15,202	0/1:29,1:19:12.06:12,0,215	0/0:23,0:20:5.71:0,6,31	0/0:25,0:23:5.97:0,6,51	0/0:19,0:17:4.23:0,4,25	0/0:37,0:34:33.05:0,33,410	1/1:20,0:20:28.59:164,29,0	1/1:17,0:17:15.24:70,15,0	1/1:11,0:11:5.63:28,6,0	0/0:25,0:24:26.70:0,27,286	0/1:23,1:24:1.20:1,0,370	0/0:25,0:24:28.09:0,28,289	0/1:18,0:19:15.33:15,0,384	0/0:18,0:18:1.86:0,2,471	1/1:15,0:15:10.74:49,11,0	0/0:12,0:12:12.30:0,12,69	0/1:17,1:18:16.31:16,0,180	0/1:25,2:27:44.57:45,0,252	0/0:14,0:13:5.23:0,5,50	0/0:17,0:14:1.55:0,2,4	0/1:13,3:16:44.71:45,0,197	0/1:19,3:23:99:114,0,332	0/0:19,0:18:17.66:0,18,151	0/0:25,0:24:54.50:0,55,575	0/1:10,2:12:16.26:16,0,210	0/0:9,0:8:14.24:0,14,137
chr10	88479538	.	CTCTCTA	C	674.11	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=6.893;DP=577;FS=0.000;HRun=0;HaplotypeScore=158.0718;InbreedingCoeff=0.2435;MQ=62.17;MQ0=7;MQRankSum=-3.913;QD=2.63;ReadPosRankSum=-1.539;VQSLOD=2.4145;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:69.32:0,69,1720	0/1:6,0:6:7.50:52,0,8	0/0:30,0:22:52.31:0,52,803	0/0:46,0:26:43.76:0,44,727	0/0:19,0:14:8.72:0,9,83	0/1:24,0:22:21.76:22,0,89	0/1:20,0:18:11.26:11,0,12	0/1:32,0:28:99:101,0,715	1/1:24,0:24:15.33:174,15,0	1/1:14,1:15:10.46:221,10,0	1/1:2,8:10:5.38:90,5,0	0/1:27,0:26:44.13:44,0,488	0/0:18,0:18:50.94:0,51,1217	0/0:23,0:22:2.66:0,3,471	0/0:23,0:23:11.82:0,12,1233	0/0:18,0:18:51.09:0,51,1443	1/1:11,0:11:10.93:55,11,0	0/0:10,0:10:4.47:0,4,343	0/0:17,0:15:42.99:0,43,774	0/0:21,0:21:54.01:0,54,1126	0/0:19,0:17:5.33:0,5,95	1/1:21,0:18:0.15:5,0,0	0/0:20,0:20:39.45:0,39,836	0/1:22,0:22:14.27:14,0,1136	0/1:18,0:17:51.44:51,0,278	0/1:26,0:25:0.89:1,0,1001	0/0:19,0:19:46.88:0,47,821	0/0:9,0:8:15.04:0,15,264
chr10	88479540	.	CTCTA	C	1651.97	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=7.018;DP=565;FS=0.477;HRun=0;HaplotypeScore=138.4286;InbreedingCoeff=0.2442;MQ=64.24;MQ0=6;MQRankSum=-3.180;QD=5.64;ReadPosRankSum=-1.042;VQSLOD=2.5698;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:31.31:0,31,1231	1/1:4,2:6:12.02:178,12,0	0/0:31,0:23:43.45:0,43,650	0/0:44,0:26:20.26:0,20,524	0/0:19,0:14:8.59:0,9,55	0/1:24,0:22:22.91:23,0,49	0/1:20,0:18:2.94:12,0,3	0/1:31,0:27:99:105,0,406	1/1:2,21:25:30.10:533,30,0	1/1:1,11:14:35.50:453,36,0	1/1:9,1:10:9.01:127,9,0	0/1:26,0:25:47.55:48,0,292	0/0:17,0:17:47.80:0,48,849	0/1:22,0:21:9.76:10,0,286	0/0:23,0:23:40.86:0,41,933	0/0:18,0:18:47.65:0,48,1031	1/1:0,10:10:12.04:241,12,0	0/0:9,0:9:1.32:0,1,147	0/0:17,0:15:42.94:0,43,556	0/0:17,0:17:50.54:0,51,749	0/1:19,0:17:8.64:9,0,39	1/1:21,0:18:1.73:8,2,0	0/0:20,0:20:42.75:0,43,567	0/1:22,0:22:19.28:19,0,754	0/1:18,0:17:51.50:51,0,167	0/1:25,0:24:13.83:14,0,569	0/0:18,0:18:40.73:0,41,594	0/0:9,0:8:0.89:0,1,133
chr10	88479542	.	CTA	C	1228.30	PASS	AB=0.990;AC=26;AF=0.464;AN=56;BaseQRankSum=8.864;DP=554;FS=2.074;HRun=0;HaplotypeScore=124.6100;InbreedingCoeff=0.1952;MQ=65.66;MQ0=6;MQRankSum=-3.209;QD=3.52;ReadPosRankSum=0.014;VQSLOD=2.0440;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:59.39:0,59,804	1/1:5,0:5:12.01:110,12,0	0/0:32,0:25:45.88:0,46,591	0/1:44,0:27:7.68:8,0,358	0/0:18,0:13:0.74:0,1,9	0/1:24,0:22:1.54:26,0,2	1/1:20,0:18:1.08:13,1,0	0/1:28,0:25:99:121,0,133	1/1:23,1:25:29.99:286,30,0	1/1:12,2:14:35.93:312,36,0	1/1:9,0:9:6:55,6,0	0/1:26,0:25:61.70:62,0,98	0/0:17,0:17:15.11:0,15,419	0/1:21,0:20:28.47:28,0,72	0/0:21,0:21:30.52:0,31,612	0/0:18,0:18:26.24:0,26,685	1/1:10,0:10:12:107,12,0	1/1:7,0:7:6.76:37,7,0	0/0:17,0:15:28.20:0,28,368	0/0:17,0:17:28.93:0,29,476	0/1:19,0:17:12.90:13,0,16	1/1:21,0:18:5.78:33,6,0	0/0:18,0:18:0.39:0,0,256	0/1:21,1:22:69.98:70,0,446	0/1:18,0:17:14.83:59,0,15	0/1:25,0:24:61.62:62,0,157	0/0:17,0:17:22.90:0,23,426	0/1:9,0:8:5.93:6,0,40
chr10	88479543	.	TA	T	1343.68	PASS	AB=0.905;AC=31;AF=0.554;AN=56;BaseQRankSum=9.903;DP=504;FS=4.133;HRun=1;HaplotypeScore=108.6366;InbreedingCoeff=0.7199;MQ=68.33;MQ0=6;MQRankSum=-8.110;QD=5.40;ReadPosRankSum=-2.093;VQSLOD=-0.1719;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:74.86:0,75,985	0/1:5,0:5:4.03:5,0,4	0/0:31,0:25:34.48:0,34,796	0/0:45,1:28:3.99:0,4,535	0/1:8,6:10:0.90:35,0,1	1/1:10,6:14:11.42:76,11,0	1/1:8,6:13:5.79:39,6,0	1/1:11,10:17:35.33:235,35,0	1/1:25,0:25:20:81,20,0	0/1:14,0:14:23.09:24,0,23	1/1:9,0:9:4.04:12,4,0	1/1:15,8:22:17.39:154,17,0	0/0:17,0:17:35.46:0,35,526	1/1:13,6:19:24.42:189,24,0	0/0:20,0:20:53.46:0,53,778	0/0:18,0:18:45.68:0,46,731	1/1:10,0:10:5.61:19,6,0	1/1:5,1:6:14.52:101,15,0	0/0:17,0:15:38.87:0,39,495	0/0:17,0:17:47.99:0,48,638	1/1:9,5:13:2.77:33,3,0	1/1:6,10:15:5.93:41,6,0	0/0:18,0:18:26.44:0,26,394	0/0:21,0:21:38.82:0,39,596	1/1:4,9:14:27:175,27,0	1/1:12,3:14:32.27:261,32,0	0/0:20,0:20:48.03:0,48,671	1/1:4,3:6:8.91:69,9,0
chr10	88479545	.	C	CCT	1451.58	PASS	AB=0.960;AC=21;AF=0.375;AN=56;BaseQRankSum=8.274;DP=517;FS=2.391;HRun=0;HaplotypeScore=123.9382;InbreedingCoeff=0.7230;MQ=69.18;MQ0=4;MQRankSum=-6.370;QD=7.60;ReadPosRankSum=-2.752;VQSLOD=2.6701;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:75.19:0,75,1094	0/0:5,0:5:12.01:0,12,125	0/0:30,0:25:35.85:0,36,811	0/0:42,0:27:8.20:0,8,550	1/1:14,0:10:4.62:23,5,0	0/1:15,0:14:2.63:35,0,3	0/1:14,0:13:0.52:20,0,1	1/1:18,5:20:38.09:471,38,0	0/0:24,0:24:29.49:0,29,255	0/0:21,0:20:36.69:0,37,375	0/0:10,0:10:6.01:0,6,61	1/1:22,0:22:16.75:149,17,0	0/0:19,0:19:51.12:0,51,694	0/1:20,0:19:0.76:81,0,1	0/0:20,0:20:57.16:0,57,829	0/0:18,0:18:54.12:0,54,779	0/0:11,0:11:15.03:0,15,155	1/1:6,0:6:0.08:6,0,0	0/0:17,0:15:36.06:0,36,522	0/0:17,0:17:48.13:0,48,672	1/1:7,7:13:2.73:43,3,0	1/1:18,0:15:3.45:10,3,0	0/0:18,0:18:35.21:0,35,498	0/0:22,0:22:63.09:0,63,838	1/1:11,1:14:26.54:299,27,0	1/1:8,8:17:17.33:357,17,0	0/0:21,0:21:54.61:0,55,767	1/1:1,4:6:9.03:144,9,0
chr10	88479548	.	CCCCTT	C	1203	PASS	AB=0.752;AC=12;AF=0.214;AN=56;BaseQRankSum=6.132;DP=507;FS=40.838;HRun=0;HaplotypeScore=136.2475;InbreedingCoeff=0.7663;MQ=70.70;MQ0=4;MQRankSum=-8.269;QD=11.35;ReadPosRankSum=-3.303;VQSLOD=0.6747;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:90.27:0,90,2539	0/0:6,0:6:14.68:0,15,212	0/0:30,0:25:65.65:0,66,1746	0/0:42,0:26:58.13:0,58,1265	0/1:9,5:9:10.29:10,0,12	1/1:8,5:11:26.04:315,26,0	1/1:12,3:13:18.31:233,18,0	0/0:22,0:19:37.30:0,37,427	0/0:26,0:26:26.79:0,27,228	0/0:22,0:21:49.13:0,49,895	0/0:12,0:12:20.87:0,21,212	0/1:16,7:22:5.06:346,0,5	0/0:20,0:20:57.18:0,57,1540	1/1:14,3:17:6.87:260,7,0	0/0:19,0:19:57.20:0,57,1784	0/0:18,0:18:54.19:0,54,1733	0/0:10,0:10:15.03:0,15,200	1/1:2,1:3:8.60:79,9,0	0/0:15,0:13:36.12:0,36,1086	0/0:16,0:16:48.16:0,48,1488	0/0:14,0:12:11.52:0,12,155	1/1:10,10:17:14.89:131,15,0	0/0:18,0:18:44.22:0,44,1208	0/0:21,0:21:63.22:0,63,1959	0/0:17,0:17:34.32:0,34,373	0/0:14,0:13:39.08:0,39,559	0/0:23,0:23:63.69:0,64,1935	0/0:6,0:5:9.03:0,9,133
chr10	88479901	.	AT	A	5566.73	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=11.955;DP=451;FS=2.255;HRun=7;HaplotypeScore=68.1154;InbreedingCoeff=0.9650;MQ=76.06;MQ0=0;MQRankSum=-2.766;QD=21.75;ReadPosRankSum=1.811;VQSLOD=4.5768;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:63.19:0,63,779	1/1:2,6:8:18.04:184,18,0	0/0:14,0:14:29.93:0,30,356	0/0:10,0:10:23.81:0,24,279	1/1:1,15:16:15.01:153,15,0	1/1:2,12:14:27.05:272,27,0	1/1:2,7:9:12.02:122,12,0	1/1:2,27:29:78.15:782,78,0	1/1:1,13:14:36.08:366,36,0	1/1:2,16:18:45.10:459,45,0	1/1:4,8:12:21.04:214,21,0	1/1:2,9:11:24.05:244,24,0	0/0:22,0:22:57.17:0,57,704	1/1:4,6:10:18.04:183,18,0	0/0:15,0:15:42.12:0,42,506	0/0:13,0:13:39.12:0,39,490	1/1:5,24:29:69.13:696,69,0	1/1:0,3:3:6.01:61,6,0	0/0:20,0:20:51.16:0,51,642	0/0:19,0:19:48.11:0,48,574	1/1:2,11:13:27.06:274,27,0	1/1:0,10:10:18.02:179,18,0	0/0:22,0:22:63.20:0,63,793	0/0:10,0:10:27.09:0,27,339	1/1:2,20:22:42.08:427,42,0	1/1:3,29:32:84.18:857,84,0	0/0:24,0:24:69.22:0,69,868	1/1:1,5:5:9.02:92,9,0
chr10	88479918	.	AT	A	1138.17	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.609;DP=432;FS=12.120;HRun=7;HaplotypeScore=85.3966;InbreedingCoeff=0.9007;MQ=73.79;MQ0=0;MQRankSum=-9.293;QD=19.29;ReadPosRankSum=-1.845;VQSLOD=1.9904;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.12:0,51,601	0/0:5,0:5:15.05:0,15,189	0/0:12,0:12:13.77:0,14,290	0/0:12,0:12:2.32:0,2,129	1/1:3,16:19:41.83:409,42,0	1/1:3,5:8:9.02:92,9,0	1/1:2,6:8:18.04:182,18,0	0/0:32,0:32:75.21:0,75,922	0/0:18,0:18:51.11:0,51,593	0/0:20,0:20:57.18:0,57,707	0/0:11,0:11:33.11:0,33,415	1/1:0,8:8:24.05:244,24,0	0/0:23,0:23:69.18:0,69,849	1/1:1,4:5:12.02:122,12,0	0/0:16,0:16:42.11:0,42,503	0/0:17,0:17:42.13:0,42,517	0/0:31,0:31:86.95:0,87,1068	1/1:0,2:2:3.01:31,3,0	0/0:18,0:18:51.10:0,51,589	0/0:15,0:15:42.13:0,42,528	0/0:13,0:13:33.11:0,33,415	1/1:1,8:9:24.05:244,24,0	0/0:22,0:22:57.17:0,57,705	0/0:7,0:7:18.06:0,18,226	0/0:24,0:24:66.18:0,66,813	0/0:30,0:30:75.23:0,75,933	0/0:22,0:22:60.19:0,60,754	0/0:6,0:5:12.04:0,12,150
chr10	88480469	.	TG	T	5411.72	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.485;DP=676;FS=1.983;HRun=2;HaplotypeScore=64.9757;InbreedingCoeff=0.9890;MQ=85.23;MQ0=0;MQRankSum=-1.359;QD=35.37;ReadPosRankSum=2.478;VQSLOD=5.5193;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.27:0,96,1375	0/0:8,0:8:24.08:0,24,358	0/0:24,0:24:69.22:0,69,988	0/0:20,0:20:57.18:0,57,818	1/1:2,24:26:72.23:933,72,0	1/1:0,42:42:99:1480,114,0	1/1:0,20:20:54.18:701,54,0	0/0:25,0:25:69.22:0,69,998	0/0:32,0:32:96.27:0,96,1376	0/0:22,0:22:56.92:0,57,854	0/0:18,0:18:54.17:0,54,789	1/1:0,17:17:48.16:623,48,0	0/0:22,0:22:63.17:0,63,900	1/1:1,20:21:51.17:662,51,0	0/0:34,0:34:99:0,99,1444	0/0:17,0:17:51.17:0,51,763	0/0:36,0:36:99:0,108,1557	1/1:0,11:11:30.10:389,30,0	0/0:31,0:31:93.18:0,93,1309	0/0:48,0:48:99:0,141,2088	0/0:34,0:34:99:0,99,1459	1/1:0,16:16:48.16:623,48,0	0/0:22,0:22:66.22:0,66,988	0/0:11,0:11:33.10:0,33,475	0/0:26,0:26:78.23:0,78,1127	0/0:26,0:26:75.25:0,75,1105	0/0:32,0:32:79.35:0,79,1365	0/0:3,0:3:9.03:0,9,135
chr10	88481158	.	A	AT	432.51	PASS	AB=0.815;AC=6;AF=0.107;AN=56;BaseQRankSum=9.406;DP=761;FS=0.000;HRun=0;HaplotypeScore=109.8977;InbreedingCoeff=-0.1207;MQ=63.02;MQ0=0;MQRankSum=-8.376;QD=2.85;ReadPosRankSum=-1.869;VQSLOD=2.5402;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1382	0/0:14,0:14:42.14:0,42,587	0/0:18,0:18:54.18:0,54,743	0/0:23,0:22:55.04:0,55,775	0/1:33,15:47:99:157,0,745	0/0:20,0:20:51.16:0,51,632	0/1:19,5:24:99:108,0,470	0/0:38,0:38:99:0,111,1447	0/0:25,0:25:75.23:0,75,1019	0/0:44,0:44:99:0,129,1790	0/0:34,0:34:99:0,102,1404	0/1:15,6:21:99:111,0,426	0/0:36,0:36:99:0,108,1510	0/1:14,4:18:65.77:66,0,432	0/0:31,0:31:93.28:0,93,1280	0/0:36,0:35:99:0,108,1497	0/0:21,0:21:63.18:0,63,845	0/1:9,2:11:61.65:62,0,272	0/0:31,0:31:90.28:0,90,1240	0/0:30,0:30:87.28:0,87,1202	0/0:22,0:22:66.20:0,66,890	0/1:25,5:30:53.53:54,0,702	0/0:29,0:29:78.26:0,78,1091	0/0:16,0:16:48.15:0,48,653	0/0:37,0:37:99:0,111,1538	0/0:22,0:22:66.22:0,66,922	0/0:43,0:43:99:0,129,1770	0/0:6,0:6:15.05:0,15,209
chr10	88481173	.	TA	T	1171.65	PASS	AB=0.746;AC=7;AF=0.125;AN=56;BaseQRankSum=12.186;DP=749;FS=2.916;HRun=7;HaplotypeScore=108.7805;InbreedingCoeff=-0.1404;MQ=63.03;MQ0=0;MQRankSum=-9.039;QD=6.37;ReadPosRankSum=-1.435;VQSLOD=0.5488;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1249	0/0:13,0:13:36.12:0,36,453	0/0:18,0:18:54.17:0,54,675	0/0:16,0:16:27.08:0,27,316	0/1:30,26:56:99:486,0,424	0/1:16,3:19:7.97:8,0,405	0/1:16,8:24:99:151,0,440	0/0:38,0:38:99:0,105,1276	0/0:28,0:28:78.21:0,78,933	0/0:39,0:39:99:0,102,1242	0/0:30,0:30:78.24:0,78,968	0/1:11,10:21:99:195,0,269	0/0:37,0:37:99:0,102,1283	0/1:12,13:25:99:259,0,380	0/0:27,0:27:78.22:0,78,955	0/0:34,0:34:96.30:0,96,1196	0/0:18,0:18:51.16:0,51,642	0/1:7,2:9:34.04:34,0,237	0/0:31,0:31:81.25:0,81,998	0/0:29,0:29:81.26:0,81,1019	0/0:19,0:19:48.15:0,48,604	0/1:21,9:30:99:166,0,576	0/0:29,0:29:81.23:0,81,980	0/0:14,0:14:36.12:0,36,453	0/0:38,0:38:99:0,111,1396	0/0:23,0:23:60.15:0,60,737	0/0:45,0:44:99:0,120,1482	0/0:5,0:5:15.05:0,15,187
chr10	88481312	.	TTTAATA	T	4493.73	PASS	AB=0.609;AC=13;AF=0.232;AN=56;BaseQRankSum=13.277;DP=589;FS=30.086;HRun=0;HaplotypeScore=165.2283;InbreedingCoeff=0.7686;MQ=77.19;MQ0=0;MQRankSum=-12.119;QD=57.61;ReadPosRankSum=3.897;VQSLOD=3.2419;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.29:0,84,3075	0/0:9,0:9:27.09:0,27,1017	0/0:15,0:15:44.73:0,45,1355	0/0:12,0:12:33.11:0,33,1151	0/1:5,9:14:39.59:617,0,40	1/1:1,12:13:14.13:818,14,0	1/1:2,6:8:1.10:439,1,0	0/0:37,0:37:99:0,111,3970	0/0:17,0:17:51.18:0,51,1895	0/0:31,0:31:93.31:0,93,3348	0/0:19,0:19:57.20:0,57,2077	1/1:1,9:10:5.12:634,5,0	0/0:38,0:38:99:0,114,4145	1/1:3,13:16:4.01:950,4,0	0/0:39,0:39:99:0,117,4051	0/0:27,0:27:81.28:0,81,3007	0/0:20,0:20:60.21:0,60,2228	1/1:1,4:5:9.91:281,10,0	0/0:21,0:21:63.22:0,63,2118	0/0:26,0:26:78.27:0,78,2858	0/0:21,0:21:63.22:0,63,2364	1/1:2,10:12:11.08:754,11,0	0/0:20,0:20:60.21:0,60,2132	0/0:24,0:24:72.25:0,72,2598	0/0:28,0:28:84.28:0,84,3029	0/0:27,0:27:81.25:0,81,2926	0/0:38,0:38:99:0,114,4158	0/0:14,0:14:42.14:0,42,1564
chr10	88481314	.	T	TA	286.29	PASS	AB=0.877;AC=6;AF=0.107;AN=56;BaseQRankSum=5.926;DP=588;FS=6.003;HRun=2;HaplotypeScore=117.3707;InbreedingCoeff=-0.0539;MQ=79.22;MQ0=0;MQRankSum=-6.870;QD=4.40;ReadPosRankSum=-3.366;VQSLOD=-0.7554;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.24:0,78,966	0/0:9,0:9:27.08:0,27,335	0/0:17,0:17:38.82:0,39,438	0/0:13,0:13:33.06:0,33,372	0/1:9,4:13:14.58:142,0,15	0/1:12,1:13:40.06:68,0,40	0/1:6,1:7:3.65:4,0,26	0/0:36,0:36:99:0,105,1256	0/0:18,0:18:51.15:0,51,619	0/0:33,0:33:90.27:0,90,1103	0/0:19,0:19:57.16:0,57,693	0/0:10,1:11:5.01:0,5,46	0/0:37,0:37:99:0,105,1300	0/1:14,1:15:39.59:54,0,40	0/0:37,0:37:99:0,102,1239	0/0:29,0:29:84.24:0,84,1015	0/0:20,0:20:60.17:0,60,729	0/1:4,1:5:7.47:70,0,7	0/0:20,0:20:54.14:0,54,643	0/0:26,0:26:78.20:0,78,928	0/0:21,0:21:63.20:0,63,781	0/1:11,1:12:29.22:69,0,29	0/0:20,0:20:57.16:0,57,683	0/0:23,0:23:69.18:0,69,828	0/0:27,0:27:81.23:0,81,979	0/0:27,0:27:78.24:0,78,957	0/0:38,0:38:99:0,114,1386	0/0:14,0:14:42.13:0,42,520
chr10	88481320	.	CTAGTG	C	3734.51	PASS	AB=0.581;AC=8;AF=0.143;AN=56;BaseQRankSum=13.400;DP=604;FS=29.220;HRun=0;HaplotypeScore=161.0029;InbreedingCoeff=0.2280;MQ=81.58;MQ0=0;MQRankSum=-12.098;QD=41.96;ReadPosRankSum=3.407;VQSLOD=2.0072;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.26:0,75,2423	0/0:9,0:9:27.09:0,27,815	0/0:20,0:21:46.27:0,46,1594	0/0:14,0:14:17.29:0,17,983	0/1:5,9:14:83.90:484,0,84	1/1:5,12:17:0.76:687,1,0	0/1:2,6:8:12.64:368,0,13	0/0:34,0:34:99:0,102,3074	0/0:17,0:17:48.16:0,48,1522	0/0:34,0:34:96.33:0,96,2972	0/0:19,0:19:57.18:0,57,1769	0/1:3,9:12:44.77:537,0,45	0/0:37,0:37:99:0,108,3455	0/1:6,13:19:99:763,0,116	0/0:38,0:38:99:0,114,3557	0/0:28,0:28:81.26:0,81,2495	0/0:21,0:21:63.19:0,63,1954	0/1:2,4:6:0.28:254,0,0	0/0:19,0:19:57.20:0,57,1830	0/0:24,0:24:72.23:0,72,2144	0/0:22,0:22:63.22:0,63,1916	0/1:2,11:13:2.05:641,0,2	0/0:23,0:23:66.21:0,66,1999	0/0:21,0:21:63.20:0,63,1953	0/0:27,0:27:78.25:0,78,2265	0/0:28,0:28:84.27:0,84,2523	0/0:38,0:38:99:0,111,3431	0/0:16,0:16:48.12:0,48,1375
chr10	88481325	.	G	GC	2689.75	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.372;DP=604;FS=25.843;HRun=0;HaplotypeScore=115.3609;InbreedingCoeff=0.9977;MQ=81.10;MQ0=0;MQRankSum=-13.865;QD=27.73;ReadPosRankSum=2.009;VQSLOD=2.2913;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.26:0,78,1089	0/0:8,0:8:24.08:0,24,334	0/0:21,0:21:51.13:0,51,683	0/0:14,0:14:37.92:0,38,473	1/1:9,6:15:38.47:473,38,0	1/1:13,5:18:39.10:455,39,0	1/1:7,4:11:24.06:284,24,0	0/0:35,0:35:99:0,99,1322	0/0:17,0:17:51.16:0,51,694	0/0:34,0:34:99:0,99,1385	0/0:20,0:20:60.20:0,60,837	1/1:9,4:13:33.09:380,33,0	0/0:38,0:38:99:0,114,1575	1/1:13,6:19:54.15:655,54,0	0/0:38,0:38:99:0,111,1534	0/0:26,0:26:78.26:0,78,1091	0/0:21,0:21:63.18:0,63,861	1/1:5,3:8:18.05:242,18,0	0/0:22,0:22:66.22:0,66,923	0/0:21,0:21:63.21:0,63,881	0/0:20,0:20:60.20:0,60,839	1/1:11,2:13:36.03:400,36,0	0/0:20,0:20:60.20:0,60,839	0/0:22,0:22:66.20:0,66,899	0/0:24,0:24:66.19:0,66,887	0/0:26,0:26:78.26:0,78,1091	0/0:38,0:38:99:0,105,1466	0/0:16,0:16:45.08:0,45,571
chr10	88482429	.	G	GAA	6143.22	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=16.295;DP=556;FS=3.875;HRun=7;HaplotypeScore=94.8062;InbreedingCoeff=0.9748;MQ=83.59;MQ0=0;MQRankSum=-3.901;QD=40.68;ReadPosRankSum=-0.982;VQSLOD=3.9197;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.17:0,63,722	0/0:5,0:5:15.03:0,15,164	0/0:20,0:20:33.05:0,33,370	0/0:14,0:14:36.10:0,36,410	1/1:6,23:29:72.20:1152,72,0	1/1:4,16:20:51.17:827,51,0	1/1:2,12:15:36.12:570,36,0	0/0:38,0:38:96.24:0,96,1093	0/0:10,0:10:24.07:0,24,280	0/0:33,0:33:90.26:0,90,1049	0/0:28,0:28:84.23:0,84,959	1/1:4,19:23:51.17:837,51,0	0/0:26,0:26:78.23:0,78,909	1/1:1,15:16:48.13:759,48,0	0/0:20,0:20:57.17:0,57,664	0/0:15,0:15:42.12:0,42,489	0/0:24,0:23:66.15:0,66,745	1/1:4,27:31:78.23:1251,78,0	0/0:13,0:13:36.08:0,36,410	0/0:33,0:33:93.27:0,93,1084	0/0:15,0:15:36.09:0,36,408	1/1:0,16:17:47.65:747,48,0	0/0:23,0:23:60.15:0,60,687	0/0:5,0:5:15.04:0,15,175	0/0:10,0:10:30.09:0,30,349	0/0:25,0:25:72.21:0,72,839	0/0:23,0:23:66.18:0,66,758	0/0:4,0:4:6.02:0,6,70
chr10	88482478	.	A	ATT	471.52	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.261;DP=543;FS=6.658;HRun=0;HaplotypeScore=106.4615;InbreedingCoeff=0.9515;MQ=75.23;MQ0=0;MQRankSum=-0.479;QD=47.15;ReadPosRankSum=0.621;VQSLOD=4.6999;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.25:0,84,1321	0/0:9,0:9:27.09:0,27,441	0/0:12,0:12:33.11:0,33,529	0/0:8,0:8:24.07:0,24,355	0/0:32,0:32:93.31:0,93,1491	0/0:20,0:20:60.20:0,60,979	0/0:13,0:13:36.11:0,36,558	0/0:34,0:34:96.29:0,96,1457	0/0:6,0:6:15.05:0,15,245	0/0:22,0:22:66.22:0,66,1056	0/0:29,0:29:84.26:0,84,1319	0/0:19,0:19:54.18:0,54,877	0/0:25,0:25:75.26:0,75,1224	0/0:14,0:14:42.14:0,42,675	0/0:18,0:18:54.18:0,54,877	0/0:15,0:15:45.15:0,45,734	0/0:16,0:15:45.15:0,45,731	0/0:25,0:25:68.76:0,69,1087	0/0:17,0:17:51.17:0,51,832	0/0:31,0:31:93.32:0,93,1509	0/0:14,0:14:42.14:0,42,684	0/0:20,0:20:60.20:0,60,976	0/0:26,0:26:78.27:0,78,1256	0/0:10,0:10:30.10:0,30,490	1/1:0,10:10:30.05:566,30,0	0/0:33,0:33:99:0,99,1595	0/0:31,0:31:90.31:0,90,1466	0/0:4,0:4:12.04:0,12,196
chr10	88482768	.	T	TC	6901.91	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=1.961;DP=677;FS=3.482;HRun=0;HaplotypeScore=69.4496;InbreedingCoeff=0.9986;MQ=86.20;MQ0=0;MQRankSum=-2.593;QD=41.58;ReadPosRankSum=3.612;VQSLOD=5.6472;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.26:0,78,1090	0/0:7,0:7:21.07:0,21,294	0/0:22,0:22:60.15:0,60,744	0/0:22,0:22:57.18:0,57,757	1/1:1,22:23:63.21:1006,63,0	1/1:0,28:28:66.23:1054,66,0	1/1:0,25:25:72.25:1151,72,0	0/0:30,0:30:90.28:0,90,1215	0/0:18,0:18:54.16:0,54,725	0/0:39,0:39:99:0,108,1511	0/0:20,0:20:60.19:0,60,809	1/1:0,16:16:45.15:718,45,0	0/0:24,0:24:72.22:0,72,977	1/1:0,20:20:54.18:863,54,0	0/0:24,0:24:72.23:0,72,991	0/0:25,0:25:72.23:0,72,977	0/0:21,0:21:54.16:0,54,737	1/1:1,29:30:69.24:1103,69,0	0/0:14,0:14:42.14:0,42,587	0/0:29,0:29:87.27:0,87,1185	0/0:33,0:33:99:0,99,1346	1/1:0,24:24:63.21:1007,63,0	0/0:29,0:29:84.27:0,84,1154	0/0:40,0:40:99:0,120,1662	0/0:23,0:23:69.22:0,69,951	0/0:34,0:34:99:0,99,1371	0/0:21,0:20:60.20:0,60,836	0/0:8,0:8:21.54:0,22,294
chr10	88483354	.	C	CTTCAG	10039.02	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.832;DP=646;FS=0.784;HRun=0;HaplotypeScore=132.5796;InbreedingCoeff=0.9638;MQ=73.40;MQ0=0;MQRankSum=-15.188;QD=60.84;ReadPosRankSum=-1.924;VQSLOD=5.2649;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,157,3073	0/0:7,0:7:21.07:0,21,426	0/0:12,0:13:27.08:0,27,479	0/0:13,0:13:2.80:0,3,286	1/1:16,0:16:39.13:969,39,0	1/1:29,0:29:63.20:1770,63,0	1/1:23,0:23:51.17:1412,51,0	0/0:21,0:21:39.13:0,39,792	0/0:29,0:29:81.28:0,81,1644	0/0:17,0:16:42.13:0,42,784	0/0:18,0:18:39.13:0,39,776	1/1:18,4:23:45.14:1256,45,0	0/0:22,0:22:63.22:0,63,1252	1/1:29,1:31:75.26:2216,75,0	0/0:26,0:26:75.26:0,75,1523	0/0:23,0:23:51.17:0,51,1011	0/0:35,0:35:96.30:0,96,1909	1/1:19,0:19:45.11:1206,45,0	0/0:20,0:20:42.12:0,42,728	0/0:21,0:21:57.20:0,57,1144	0/0:44,0:44:99:0,123,2449	1/1:24,0:24:48.14:1209,48,0	0/0:14,0:14:27.09:0,27,542	0/0:26,0:26:75.26:0,75,1507	0/0:20,0:20:60.12:0,60,1111	0/0:29,0:29:72.25:0,72,1461	0/0:23,0:23:66.21:0,66,1268	0/0:6,0:6:15.05:0,15,289
chr10	88483361	.	T	TCAG	4460.64	PASS	AB=0.586;AC=8;AF=0.143;AN=56;BaseQRankSum=14.995;DP=621;FS=3.391;HRun=0;HaplotypeScore=124.2538;InbreedingCoeff=0.1900;MQ=73.18;MQ0=0;MQRankSum=-15.612;QD=30.34;ReadPosRankSum=1.895;VQSLOD=5.4166;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,163,2944	0/0:7,0:7:21.07:0,21,391	0/0:11,0:11:33.11:0,33,610	0/0:15,0:15:37.26:0,37,564	0/1:2,13:15:10.27:444,0,10	1/1:4,19:23:13.68:870,14,0	0/1:9,13:22:99:599,0,136	0/0:17,0:17:45.15:0,45,834	0/0:28,0:28:84.29:0,84,1564	0/0:16,0:15:42.14:0,42,754	0/0:17,0:17:48.16:0,48,888	0/1:5,13:18:5.57:562,0,6	0/0:24,0:24:72.21:0,72,1283	0/1:5,22:27:14.82:981,0,15	0/0:27,0:27:81.27:0,81,1479	0/0:19,0:19:57.18:0,57,1024	0/0:32,0:32:96.29:0,96,1752	0/1:7,12:19:68.80:532,0,69	0/0:20,0:20:57.18:0,57,994	0/0:23,0:23:63.22:0,63,1160	0/0:46,0:46:99:0,135,2416	0/1:8,15:23:99:473,0,172	0/0:10,0:10:30.09:0,30,530	0/0:29,0:29:78.27:0,78,1452	0/0:22,0:22:66.14:0,66,1168	0/0:29,0:29:78.27:0,78,1447	0/0:23,0:23:69.22:0,69,1212	0/0:5,0:5:15.05:0,15,270
chr10	88483362	.	T	TTC	2897.22	PASS	AB=0.601;AC=10;AF=0.179;AN=56;BaseQRankSum=15.881;DP=625;FS=0.813;HRun=0;HaplotypeScore=117.6118;InbreedingCoeff=0.5077;MQ=73.08;MQ0=0;MQRankSum=-14.795;QD=19.58;ReadPosRankSum=2.199;VQSLOD=3.7232;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,156,2491	0/0:7,0:7:21.07:0,21,342	0/0:11,0:11:33.11:0,33,515	0/0:15,0:15:32.38:0,32,495	0/1:2,13:15:48.29:226,0,48	1/1:4,19:23:27.86:617,28,0	0/1:10,13:23:84.14:395,0,84	0/0:17,0:17:45.15:0,45,711	0/0:28,0:28:84.29:0,84,1369	0/0:15,0:14:45.14:0,45,690	0/0:17,0:17:48.16:0,48,768	1/1:3,13:16:19.62:417,20,0	0/0:24,0:24:72.21:0,72,1137	1/1:6,22:28:58.84:777,59,0	0/0:27,0:27:81.26:0,81,1296	0/0:20,0:20:57.19:0,57,906	0/0:32,0:32:93.32:0,93,1516	0/1:8,12:20:35.72:356,0,36	0/0:20,0:20:51.17:0,51,825	0/0:24,0:24:63.18:0,63,973	0/0:46,0:46:99:0,135,2119	0/1:8,15:23:99:273,0,116	0/0:10,0:10:30.09:0,30,464	0/0:29,0:29:87.25:0,87,1342	0/0:22,0:22:66.19:0,66,991	0/0:30,0:30:87.26:0,87,1327	0/0:22,0:22:66.19:0,66,1024	0/0:5,0:5:15.03:0,15,219
chr10	88483564	.	CTGTGTG	C	742.75	PASS	AB=0.815;AC=8;AF=0.143;AN=56;BaseQRankSum=4.161;DP=633;FS=8.798;HRun=0;HaplotypeScore=139.2822;InbreedingCoeff=0.4794;MQ=63.30;MQ0=8;MQRankSum=-3.669;QD=6.24;ReadPosRankSum=0.486;VQSLOD=1.4140;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:42.14:0,42,1231	0/0:9,0:9:6.02:0,6,99	0/1:25,1:18:33.19:51,0,33	0/0:35,0:23:15.05:0,15,309	0/0:28,0:27:15.05:0,15,390	0/0:18,0:26:15.75:0,16,255	0/0:17,0:21:12.04:0,12,243	1/1:33,4:37:8.60:185,9,0	0/0:19,0:18:18.39:0,18,363	0/0:27,0:26:45.13:0,45,955	0/0:8,0:8:3.01:0,3,91	0/0:19,0:19:21.06:0,21,504	0/0:20,0:22:39.13:0,39,1036	0/0:11,0:17:6.47:0,6,103	0/0:23,0:25:33.11:0,33,925	0/0:22,0:22:48.16:0,48,1482	0/0:26,0:25:13.99:0,14,208	0/0:10,0:17:8.06:0,8,168	0/0:21,0:21:21.94:0,22,474	0/0:26,0:27:51.16:0,51,1361	1/1:20,5:22:2.96:20,3,0	0/0:9,0:18:3.01:0,3,78	0/0:11,0:15:19.31:0,19,481	0/0:28,0:28:54.17:0,54,1522	0/0:21,0:21:27.09:0,27,782	0/1:8,7:15:21.46:376,0,21	0/0:28,0:30:54.13:0,54,1318	1/1:11,1:15:13.68:247,14,0
chr10	88483729	.	CCCCT	C	1080.25	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.677;DP=539;FS=0.000;HRun=0;HaplotypeScore=96.9813;InbreedingCoeff=0.9270;MQ=71.02;MQ0=0;MQRankSum=-3.494;QD=10.80;ReadPosRankSum=1.709;VQSLOD=2.4427;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.32:0,93,2247	0/0:10,0:10:24.08:0,24,607	0/0:14,0:13:36.55:0,37,787	0/0:18,0:18:37.21:0,37,702	1/1:11,0:11:1.69:29,2,0	1/1:26,2:28:64.27:441,64,0	1/1:17,1:18:35.09:237,35,0	0/0:25,0:25:69.21:0,69,1478	0/0:20,0:20:60.16:0,60,1361	0/0:18,0:18:48.15:0,48,1082	0/0:18,0:18:54.17:0,54,1314	1/1:12,0:12:26.16:147,26,0	0/0:24,0:24:66.21:0,66,1608	1/1:18,0:18:34.96:198,35,0	0/0:19,0:19:54.17:0,54,1287	0/0:18,0:18:51.17:0,51,1290	0/0:25,0:25:62.44:0,62,1568	0/0:21,0:21:7.16:0,7,21	0/0:26,0:26:72.24:0,72,1758	0/0:19,0:19:54.17:0,54,1313	0/0:18,0:18:54.19:0,54,1325	1/1:11,2:13:29.32:209,29,0	0/0:19,0:19:51.15:0,51,1234	0/0:30,0:30:84.24:0,84,1952	0/0:16,0:16:45.15:0,45,1102	0/0:21,0:21:63.21:0,63,1503	0/0:26,0:26:75.24:0,75,1812	0/0:3,0:3:9.03:0,9,228
chr10	88483730	.	CCCT	C	3220.05	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.642;DP=537;FS=3.117;HRun=0;HaplotypeScore=78.3508;InbreedingCoeff=0.9877;MQ=71.10;MQ0=0;MQRankSum=-2.441;QD=26.83;ReadPosRankSum=2.176;VQSLOD=3.6386;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.28:0,93,1839	0/0:10,0:10:24.07:0,24,504	0/0:14,0:13:37.04:0,37,646	0/0:18,0:18:30.63:0,31,532	1/1:10,1:11:19.91:133,20,0	1/1:3,25:28:66.17:1019,66,0	1/1:2,15:17:36.12:575,36,0	0/0:25,0:25:69.17:0,69,1219	0/0:20,0:20:60.14:0,60,1125	0/0:18,0:18:48.15:0,48,906	0/0:18,0:18:54.17:0,54,1096	1/1:0,12:12:27.09:445,27,0	0/0:23,0:23:66.21:0,66,1341	1/1:1,17:18:36.12:595,36,0	0/0:19,0:19:54.17:0,54,1070	0/0:17,0:17:51.18:0,51,1072	0/0:25,0:25:62.04:0,62,1298	1/1:21,0:21:47.77:236,48,0	0/0:25,0:25:72.24:0,72,1464	0/0:21,0:21:60.17:0,60,1146	0/0:18,0:18:54.19:0,54,1096	1/1:3,10:13:30:415,30,0	0/0:20,0:20:54.14:0,54,1054	0/0:29,0:29:87.20:0,87,1630	0/0:16,0:16:45.15:0,45,912	0/0:21,0:21:63.20:0,63,1245	0/0:26,0:26:75.24:0,75,1506	0/0:3,0:3:9.03:0,9,189
chr10	88483731	.	CCT	C	2428.60	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.177;DP=537;FS=2.496;HRun=0;HaplotypeScore=70.6807;InbreedingCoeff=0.9876;MQ=71.10;MQ0=0;MQRankSum=-2.095;QD=20.41;ReadPosRankSum=2.219;VQSLOD=3.9939;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.23:0,93,1479	0/0:8,0:8:24.08:0,24,406	0/0:14,0:13:38.95:0,39,553	0/0:18,0:18:24.20:0,24,424	1/1:1,10:11:21.01:268,21,0	1/1:28,0:28:65.87:539,66,0	1/1:16,0:16:35.95:299,36,0	0/0:28,0:28:78.17:0,78,1084	0/0:20,0:20:60.14:0,60,917	0/0:18,0:18:51.15:0,51,765	0/0:18,0:18:54.17:0,54,888	1/1:12,0:12:26.97:223,27,0	0/0:23,0:23:66.21:0,66,1088	1/1:18,0:18:35.96:300,36,0	0/0:18,0:18:54.16:0,54,855	0/0:17,0:17:51.17:0,51,864	0/0:23,1:24:61.58:0,62,1035	1/1:0,21:21:51.17:761,51,0	0/0:25,0:25:72.24:0,72,1184	0/0:21,0:21:60.17:0,60,937	0/0:18,0:18:54.18:0,54,879	1/1:12,1:13:29.89:237,30,0	0/0:19,0:19:54.14:0,54,858	0/0:31,0:31:93.18:0,93,1383	0/0:17,0:17:48.13:0,48,750	0/0:21,0:21:63.20:0,63,1010	0/0:26,0:26:75.22:0,75,1208	0/0:3,0:3:9.03:0,9,152
chr10	88484470	.	C	CA	199.11	PASS	AB=0.875;AC=8;AF=0.143;AN=56;BaseQRankSum=6.731;DP=631;FS=1.983;HRun=0;HaplotypeScore=104.6613;InbreedingCoeff=0.4262;MQ=81.72;MQ0=0;MQRankSum=-1.920;QD=2.07;ReadPosRankSum=-4.727;VQSLOD=1.1495;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,1883	0/0:10,0:10:27.08:0,27,361	0/0:22,0:22:44.75:0,45,536	0/0:21,0:21:47.94:0,48,561	0/1:11,0:11:24.63:60,0,25	0/0:10,3:13:4.59:0,5,18	0/1:18,9:27:2.39:14,0,2	0/0:29,0:29:79.59:0,80,918	0/0:13,0:13:39.13:0,39,543	0/0:31,0:31:93.28:0,93,1238	0/0:19,0:19:57.17:0,57,747	1/1:15,0:15:9.60:126,10,0	0/0:27,0:27:75.25:0,75,1044	1/1:11,0:11:7.18:88,7,0	0/0:29,0:29:87.24:0,87,1163	0/0:24,0:24:72.20:0,72,942	0/0:37,0:37:99:0,105,1397	0/1:10,0:15:10.50:10,0,36	0/0:16,0:16:45.12:0,45,578	0/0:26,0:26:78.17:0,78,1021	0/0:35,0:35:99:0,102,1389	0/1:17,0:17:26.10:37,0,26	0/0:19,0:19:54.15:0,54,699	0/0:20,0:20:57.17:0,57,762	0/0:30,0:30:84.26:0,84,1142	0/0:26,0:26:75.24:0,75,1033	0/0:27,0:27:81.26:0,81,1113	0/0:14,0:14:42.13:0,42,568
chr10	88484988	.	T	TG	7926.51	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-15.923;DP=877;FS=4.464;HRun=2;HaplotypeScore=76.1679;InbreedingCoeff=0.9996;MQ=83.31;MQ0=1;MQRankSum=-8.332;QD=37.39;ReadPosRankSum=1.766;VQSLOD=5.6026;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:99:0,132,1601	0/0:19,0:19:57.17:0,57,695	0/0:27,0:27:78.23:0,78,949	0/0:22,0:22:54.17:0,54,660	1/1:2,23:25:63.21:907,63,0	1/1:2,24:26:63.21:907,63,0	1/1:1,33:34:90.30:1296,90,0	0/0:28,0:28:72.22:0,72,882	0/0:44,0:44:99:0,129,1586	0/0:32,0:32:96.29:0,96,1180	0/0:17,0:17:51.16:0,51,632	1/1:0,35:35:96.32:1382,96,0	0/0:34,0:34:99:0,99,1214	1/1:0,50:50:99:1901,132,0	0/0:44,0:44:99:0,132,1623	0/0:37,0:37:99:0,102,1265	0/0:39,0:39:99:0,117,1449	1/1:0,17:17:48.12:668,48,0	0/0:24,0:24:72.18:0,72,865	0/0:21,0:21:63.20:0,63,781	0/0:88,0:88:99:0,259,3167	1/1:1,24:25:60.20:864,60,0	0/0:25,0:25:75.19:0,75,891	0/0:30,0:30:90.24:0,90,1098	0/0:20,0:20:57.18:0,57,707	0/0:33,0:33:96.29:0,96,1180	0/0:25,0:24:75.20:0,75,913	0/0:8,0:8:24.08:0,24,298
chr10	88486334	.	A	AG	7523.07	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=6.494;DP=664;FS=2.795;HRun=0;HaplotypeScore=75.0136;InbreedingCoeff=0.9990;MQ=80.37;MQ0=0;MQRankSum=-5.268;QD=45.05;ReadPosRankSum=-0.603;VQSLOD=4.8799;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.15:0,51,680	0/0:8,0:8:24.08:0,24,336	0/0:19,0:19:54.17:0,54,739	0/0:15,0:15:42.13:0,42,560	1/1:3,23:26:75.17:1163,75,0	1/1:3,27:30:90.31:1422,90,0	1/1:3,11:14:36.12:572,36,0	0/0:35,0:35:99:0,102,1411	0/0:20,0:20:60.20:0,60,839	0/0:32,0:32:96.31:0,96,1326	0/0:31,0:31:93.28:0,93,1249	1/1:4,26:30:87.15:1295,87,0	0/0:21,0:21:63.21:0,63,881	1/1:1,22:23:69.17:1061,69,0	0/0:27,0:27:78.26:0,78,1091	0/0:30,0:30:90.30:0,90,1259	0/0:17,0:17:51.17:0,51,713	1/1:2,7:9:27.05:403,27,0	0/0:13,0:13:39.12:0,39,530	0/0:33,0:33:96.32:0,96,1343	0/0:16,0:16:48.15:0,48,656	1/1:2,33:35:99:1606,102,0	0/0:37,0:37:99:0,102,1402	0/0:16,0:16:48.14:0,48,639	0/0:37,0:37:99:0,111,1552	0/0:29,0:29:87.28:0,87,1203	0/0:36,0:35:99:0,108,1494	0/0:8,0:8:24.08:0,24,336
chr10	88486402	.	AG	A	5742.91	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=18.743;DP=707;FS=3.830;HRun=4;HaplotypeScore=108.9579;InbreedingCoeff=0.9942;MQ=76.10;MQ0=0;MQRankSum=-4.030;QD=31.55;ReadPosRankSum=3.061;VQSLOD=4.6926;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.20:0,60,839	0/0:12,0:12:36.12:0,36,504	0/0:16,0:16:42.08:0,42,523	0/0:20,0:20:29.09:0,29,616	1/1:0,29:29:81.21:954,81,0	1/1:2,26:28:66.09:745,66,0	1/1:0,18:19:51.11:595,51,0	0/0:35,0:35:99:0,102,1413	0/0:20,0:20:57.14:0,57,729	0/0:37,0:37:99:0,111,1537	0/0:28,0:28:78.25:0,78,1074	1/1:2,23:25:72.22:863,72,0	0/0:27,0:27:78.25:0,78,1073	1/1:1,33:35:96.28:1139,96,0	0/0:33,0:33:93.31:0,93,1302	0/0:39,0:39:99:0,114,1563	0/0:12,0:12:36.09:0,36,482	1/1:1,13:15:42.11:491,42,0	0/0:15,0:15:42.12:0,42,569	0/0:39,0:39:99:0,117,1620	0/0:25,0:25:72.24:0,72,1005	1/1:0,30:31:81.21:955,81,0	0/0:29,0:29:78.26:0,78,1091	0/0:15,0:15:39.13:0,39,546	0/0:40,0:40:99:0,120,1674	0/0:26,0:26:66.22:0,66,924	0/0:33,0:32:99:0,99,1364	0/0:4,0:4:12.04:0,12,168
chr10	88487009	.	AG	A	4242.31	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.439;DP=531;FS=0.975;HRun=2;HaplotypeScore=65.9404;InbreedingCoeff=0.9922;MQ=80.63;MQ0=0;MQRankSum=-2.847;QD=35.35;ReadPosRankSum=2.777;VQSLOD=5.3953;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1480	0/0:4,0:4:12.01:0,12,157	0/0:21,0:21:63.20:0,63,909	0/0:8,0:7:18.06:0,18,256	1/1:0,17:17:48.16:622,48,0	1/1:0,18:18:48.16:623,48,0	1/1:0,9:9:21.07:273,21,0	0/0:26,0:26:78.25:0,78,1132	0/0:22,0:22:66.22:0,66,987	0/0:23,0:23:69.23:0,69,1031	0/0:15,0:15:45.12:0,45,617	1/1:1,17:18:48.16:623,48,0	0/0:17,0:17:51.17:0,51,764	1/1:0,21:21:57.19:740,57,0	0/0:17,0:17:51.17:0,51,764	0/0:21,0:21:63.21:0,63,943	0/0:22,0:22:63.21:0,63,944	1/1:0,13:13:39.13:506,39,0	0/0:20,0:20:60.18:0,60,859	0/0:21,0:21:63.19:0,63,902	0/0:19,0:19:54.16:0,54,769	1/1:0,24:24:66.21:856,66,0	0/0:14,0:14:42.14:0,42,628	0/0:23,0:22:66.22:0,66,989	0/0:24,0:24:69.21:0,69,993	0/0:21,0:21:60.19:0,60,875	0/0:25,0:25:75.22:0,75,1082	0/0:15,0:15:45.15:0,45,674
chr10	88487533	.	G	GGGGTGTGTGT	3564.52	PASS	AB=0.844;AC=20;AF=0.357;AN=56;BaseQRankSum=3.508;DP=745;FS=46.303;HRun=0;HaplotypeScore=245.6202;InbreedingCoeff=0.4450;MQ=62.81;MQ0=4;MQRankSum=-2.297;QD=10.70;ReadPosRankSum=-4.168;VQSLOD=0.8483;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:34:59.96:0,60,674	0/1:4,0:7:13.48:13,0,46	0/0:20,0:17:47.96:0,48,458	0/0:22,0:15:35.59:0,36,347	1/1:1,0:36:17.78:119,18,0	1/1:27,0:26:66.49:807,66,0	1/1:24,0:23:12.51:308,13,0	0/0:26,0:27:27.23:0,27,516	0/1:24,0:33:99:113,0,287	0/1:16,0:30:99:490,0,245	0/1:22,0:22:99:118,0,225	1/1:33,0:32:51.43:717,51,0	0/0:35,0:37:81.99:0,82,1262	1/1:0,18:25:3.01:160,3,0	0/0:29,0:30:53.76:0,54,1203	0/0:29,0:30:72.28:0,72,1346	0/1:20,0:21:94.47:369,0,94	1/1:1,7:15:5.55:184,6,0	0/0:26,0:25:23.88:0,24,535	0/0:18,0:18:47.20:0,47,842	0/0:28,0:38:73.37:0,73,694	1/1:1,1:31:5.79:161,6,0	0/0:18,0:24:59.63:0,60,783	0/0:34,0:40:61.75:0,62,1271	0/0:22,0:22:1.30:0,1,685	0/1:17,0:27:6.40:6,0,813	0/0:20,0:25:64.76:0,65,1108	0/0:12,0:18:41.95:0,42,507
chr10	88489116	.	TC	T	3905.06	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.380;DP=634;FS=2.799;HRun=3;HaplotypeScore=82.8915;InbreedingCoeff=0.9974;MQ=87.51;MQ0=0;MQRankSum=-5.173;QD=30.27;ReadPosRankSum=0.813;VQSLOD=3.3081;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,1905	0/0:7,0:7:21.06:0,21,285	0/0:25,0:25:62.23:0,62,835	0/0:21,0:21:47.25:0,47,621	1/1:1,20:21:45.14:556,45,0	1/1:1,18:19:54.17:667,54,0	1/1:5,25:30:66.06:754,66,0	0/0:32,0:32:93.29:0,93,1283	0/0:18,0:18:48.16:0,48,691	0/0:17,0:17:51.17:0,51,734	0/0:12,0:12:36.12:0,36,518	1/1:1,24:25:69.22:853,69,0	0/0:35,0:35:99:0,99,1393	1/1:0,16:16:45.14:557,45,0	0/0:26,0:26:78.22:0,78,1048	0/0:23,0:23:66.21:0,66,933	0/0:24,0:24:69.21:0,69,973	1/1:1,7:8:18.06:223,18,0	0/0:23,0:23:69.23:0,69,988	0/0:17,0:17:48.14:0,48,671	0/0:25,0:25:72.21:0,72,998	1/1:2,8:10:24.07:294,24,0	0/0:23,0:23:66.21:0,66,932	0/0:29,0:29:84.24:0,84,1165	0/0:26,0:26:75.25:0,75,1075	0/0:24,0:24:72.24:0,72,1036	0/0:36,0:34:99:0,108,1548	0/0:16,0:16:48.16:0,48,686
chr10	88489149	.	CTT	C	5589.18	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.909;DP=662;FS=1.159;HRun=4;HaplotypeScore=95.1533;InbreedingCoeff=0.9992;MQ=82.50;MQ0=0;MQRankSum=-9.389;QD=37.51;ReadPosRankSum=0.962;VQSLOD=4.1641;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,2106	0/0:7,0:7:21.06:0,21,364	0/0:25,0:24:64.44:0,64,1074	0/0:23,0:23:66.23:0,66,1189	1/1:2,20:22:51.15:729,51,0	1/1:2,18:20:54.18:793,54,0	1/1:4,26:30:81.25:1168,81,0	0/0:26,0:26:78.27:0,78,1453	0/0:22,0:22:66.23:0,66,1229	0/0:22,0:22:66.20:0,66,1119	0/0:12,0:12:36.12:0,36,674	1/1:3,24:27:72.24:1051,72,0	0/0:29,0:29:84.27:0,84,1508	1/1:3,18:21:57.19:835,57,0	0/0:29,0:29:84.28:0,84,1545	0/0:21,0:21:57.19:0,57,1027	0/0:28,0:28:78.27:0,78,1461	1/1:1,14:15:36.12:530,36,0	0/0:31,0:31:87.30:0,87,1596	0/0:20,0:20:60.21:0,60,1124	0/0:24,0:24:72.22:0,72,1268	1/1:2,12:14:33.11:484,33,0	0/0:21,0:21:63.18:0,63,1089	0/0:26,0:26:75.24:0,75,1325	0/0:27,0:27:81.26:0,81,1427	0/0:32,0:32:96.32:0,96,1729	0/0:31,0:29:87.29:0,87,1594	0/0:17,0:17:51.17:0,51,954
chr10	88489405	.	G	GAAA	6102.63	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.645;DP=594;FS=6.540;HRun=7;HaplotypeScore=93.8252;InbreedingCoeff=0.9981;MQ=83.00;MQ0=0;MQRankSum=-3.938;QD=41.51;ReadPosRankSum=0.264;VQSLOD=4.3424;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.11:0,57,749	0/0:10,0:10:24.07:0,24,327	0/0:13,0:13:23.92:0,24,282	0/0:27,0:27:31.36:0,31,610	1/1:1,25:29:75.08:1381,75,0	1/1:2,22:24:45.15:928,45,0	1/1:4,17:21:42.14:870,42,0	0/0:20,0:20:29.39:0,29,438	0/0:22,0:22:57.16:0,57,761	0/0:20,0:20:51.14:0,51,691	0/0:15,0:15:45.15:0,45,610	1/1:4,13:17:39.13:809,39,0	0/0:24,0:24:69.21:0,69,921	1/1:5,12:18:36.12:726,36,0	0/0:32,0:32:84.23:0,84,1113	0/0:23,0:23:63.19:0,63,844	0/0:18,0:18:48.13:0,48,636	1/1:2,17:19:42.14:871,42,0	0/0:25,0:25:63.18:0,63,828	0/0:27,0:27:75.03:0,75,963	0/0:22,0:22:60.16:0,60,795	1/1:1,16:19:27.05:518,27,0	0/0:22,0:22:59.84:0,60,764	0/0:8,0:8:21.07:0,21,287	0/0:22,0:22:51.16:0,51,696	0/0:24,0:24:57.08:0,57,721	0/0:32,0:31:90.29:0,90,1210	0/0:19,0:19:39.13:0,39,532
chr10	88489606	.	T	TC	6662.56	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=17.331;DP=666;FS=12.926;HRun=0;HaplotypeScore=91.6508;InbreedingCoeff=0.9996;MQ=76.55;MQ0=0;MQRankSum=-2.316;QD=36.61;ReadPosRankSum=3.793;VQSLOD=3.6980;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.17:0,54,739	0/0:9,0:9:24.07:0,24,306	0/0:14,0:14:33.65:0,34,354	0/0:18,0:18:51.02:0,51,594	1/1:0,27:27:63.13:885,63,0	1/1:0,29:29:69.23:1008,69,0	1/1:0,24:24:63.21:921,63,0	0/0:29,0:29:84.22:0,84,1059	0/0:24,0:24:72.23:0,72,990	0/0:21,0:21:57.15:0,57,761	0/0:25,0:25:69.19:0,69,898	1/1:2,29:31:78.23:1117,78,0	0/0:32,0:32:96.24:0,96,1257	1/1:0,23:23:54.18:787,54,0	0/0:24,0:24:72.22:0,72,976	0/0:31,0:31:93.30:0,93,1284	0/0:27,0:27:78.16:0,78,985	1/1:1,19:20:57.19:833,57,0	0/0:22,0:22:63.20:0,63,866	0/0:30,0:30:87.20:0,87,1116	0/0:28,0:28:84.27:0,84,1157	1/1:0,28:28:78.18:1111,78,0	0/0:16,0:16:45.07:0,45,546	0/0:13,0:13:36.12:0,36,503	0/0:24,0:24:72.21:0,72,948	0/0:23,0:23:69.20:0,69,903	0/0:36,0:36:99:0,108,1416	0/0:20,0:20:60.20:0,60,838
chr10	88489940	.	T	TCTTC	8732.21	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=6.204;DP=732;FS=1.648;HRun=0;HaplotypeScore=146.6702;InbreedingCoeff=0.9942;MQ=68.99;MQ0=0;MQRankSum=-7.101;QD=50.48;ReadPosRankSum=1.537;VQSLOD=5.9691;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:75.22:0,75,1247	0/0:14,0:14:36.12:0,36,618	0/0:28,0:28:72.21:0,72,1153	0/0:32,0:30:59.48:0,59,931	1/1:5,21:26:60.12:1384,60,0	1/1:8,23:32:51.17:1291,51,0	1/1:9,12:21:39.13:943,39,0	0/0:31,0:31:66.22:0,66,1107	0/0:31,0:31:87.29:0,87,1469	0/0:38,0:38:99:0,99,1684	0/0:20,0:20:51.17:0,51,887	1/1:5,24:32:69.24:1730,69,0	0/0:30,0:30:37.03:0,37,1306	1/1:9,21:30:66.23:1654,66,0	0/0:30,0:30:78.23:0,78,1272	0/0:25,0:25:66.23:0,66,1148	0/0:25,0:25:69.19:0,69,1166	1/1:2,5:8:11.96:305,12,0	0/0:22,0:22:48.15:0,48,807	0/0:27,0:27:69.20:0,69,1120	0/0:17,0:17:42.10:0,42,664	1/1:3,21:24:63.21:1426,63,0	0/0:35,0:35:78.26:0,78,1331	0/0:21,0:21:60.19:0,60,1015	0/0:24,0:24:69.21:0,69,1143	0/0:32,0:32:84.27:0,84,1410	0/0:28,0:26:75.23:0,75,1244	0/0:19,0:19:51.15:0,51,832
chr10	88490143	.	CT	C	6476.01	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=15.452;DP=546;FS=6.528;HRun=4;HaplotypeScore=77.0388;InbreedingCoeff=0.9876;MQ=82.63;MQ0=0;MQRankSum=-3.666;QD=31.44;ReadPosRankSum=1.867;VQSLOD=5.4542;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.15:0,45,629	1/1:1,7:8:15.05:180,15,0	0/0:19,0:18:26.74:0,27,372	0/0:16,0:16:20.73:0,21,320	1/1:0,25:25:69.21:826,69,0	1/1:0,24:24:69.17:810,69,0	1/1:0,17:17:42.13:504,42,0	0/0:29,0:29:87.26:0,87,1159	1/1:2,17:19:45.14:540,45,0	1/1:0,17:17:51.11:596,51,0	1/1:1,16:17:45.14:538,45,0	1/1:2,20:22:54.12:631,54,0	0/0:18,0:18:51.16:0,51,696	1/1:0,24:24:72.18:847,72,0	0/0:25,0:25:72.24:0,72,1007	0/0:15,1:16:9.16:0,9,517	1/1:0,14:14:36.11:432,36,0	1/1:0,7:7:18.06:215,18,0	0/0:27,0:27:81.25:0,81,1102	0/0:33,0:33:96.24:0,96,1291	0/0:9,0:9:24.08:0,24,336	1/1:0,12:12:30.09:359,30,0	0/0:22,0:22:63.20:0,63,863	0/0:14,0:14:42.13:0,42,572	0/0:20,0:20:54.18:0,54,755	0/0:38,0:38:99:0,111,1500	0/0:25,0:24:75.22:0,75,1023	0/0:12,0:12:30.10:0,30,420
chr10	88490440	.	C	CAT	1944.73	PASS	AC=22;AF=0.407;AN=54;BaseQRankSum=6.294;DP=644;FS=4.841;HRun=0;HaplotypeScore=135.6558;InbreedingCoeff=0.9331;MQ=66.14;MQ0=15;MQRankSum=-2.258;QD=9.09;ReadPosRankSum=-1.100;VQSLOD=3.2200;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:65.86:0,66,963	1/1:8,0:8:15.02:198,15,0	0/0:45,0:19:54.14:0,54,767	0/0:40,0:18:41.04:0,41,607	1/1:25,0:26:3.79:30,4,0	1/1:23,0:24:8.92:63,9,0	1/1:20,0:21:40.25:301,40,0	0/0:25,0:24:17.65:0,18,383	1/1:12,0:14:20.88:141,21,0	1/1:3,14:19:44.24:457,44,0	1/1:2,16:19:11.98:241,12,0	1/1:21,0:22:48.86:354,49,0	0/0:22,0:22:57.19:0,57,899	1/1:22,0:22:13.22:71,13,0	0/0:30,0:30:87.28:0,87,1389	0/0:19,0:19:54.13:0,54,818	1/1:4,20:26:11.41:259,11,0	1/1:13,0:13:5.94:41,6,0	0/0:11,0:9:24.02:0,24,322	0/0:37,0:37:99:0,111,1623	0/0:32,0:31:56.70:0,57,445	./.	0/0:21,0:21:51.16:0,51,795	0/0:21,0:21:60.10:0,60,933	0/0:19,0:18:18.44:0,18,156	0/0:25,0:25:61.03:0,61,499	0/0:22,0:22:63.11:0,63,932	0/0:10,0:10:23.73:0,24,223
chr10	88490443	.	GTGTA	G	2588.89	PASS	AB=0.990;AC=20;AF=0.370;AN=54;BaseQRankSum=3.496;DP=653;FS=0.422;HRun=0;HaplotypeScore=144.2906;InbreedingCoeff=0.3063;MQ=63.59;MQ0=16;MQRankSum=-2.685;QD=8.78;ReadPosRankSum=-0.866;VQSLOD=2.9213;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:36.26:0,36,740	0/1:8,0:8:16.28:16,0,40	0/0:43,0:17:38.17:0,38,401	0/0:38,0:16:37.30:0,37,357	1/1:2,25:27:8.95:138,9,0	1/1:4,21:25:12.02:192,12,0	1/1:14,6:20:15.10:321,15,0	0/1:25,0:24:32.78:250,0,33	1/1:12,4:16:23.55:375,24,0	0/1:22,0:22:13.79:173,0,14	0/1:19,0:19:8.51:9,0,86	1/1:19,4:23:53.80:516,54,0	0/0:23,0:23:65.76:0,66,1197	1/1:2,22:24:11.87:224,12,0	0/0:31,0:31:90.20:0,90,1886	0/0:17,0:17:48.05:0,48,881	0/0:26,0:26:2.20:0,2,163	0/0:3,13:15:3.01:0,3,33	0/0:11,0:9:23.04:0,23,275	0/0:39,0:39:99:0,104,2122	0/1:32,0:31:99:177,0,170	./.	0/0:20,0:20:45.11:0,45,898	0/0:23,0:23:63.10:0,63,1305	0/1:20,0:19:90.38:90,0,129	0/1:23,0:23:99:139,0,241	0/0:22,0:22:57.10:0,57,1101	0/1:10,1:11:89.94:153,0,90
chr10	88490447	.	ATG	A	78.52	PASS	AB=0.985;AC=9;AF=0.180;AN=50;BaseQRankSum=5.351;DP=666;FS=0.732;HRun=0;HaplotypeScore=136.2621;InbreedingCoeff=0.0657;MQ=61.36;MQ0=18;MQRankSum=-1.681;QD=0.44;ReadPosRankSum=1.884;VQSLOD=2.4847;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:41.20:41,0,183	0/0:9,0:9:8.99:0,9,75	./.	./.	0/1:29,0:29:13.26:17,0,13	1/1:23,0:23:8.23:35,8,0	0/0:25,0:25:4.26:0,4,27	0/0:26,0:26:28.89:0,29,220	0/1:17,0:17:30.26:30,0,44	0/0:23,0:23:19.23:0,19,126	0/0:20,0:20:11.68:0,12,80	0/1:23,0:23:3.14:14,0,3	0/0:23,0:23:17.84:0,18,589	0/1:25,0:25:10.02:32,0,10	0/0:32,0:31:66.19:0,66,954	0/1:15,2:17:37.17:37,0,335	0/0:26,0:26:18.48:0,18,175	0/0:16,0:15:3.01:0,3,39	0/0:12,0:10:6.02:0,6,91	0/0:32,2:34:18.65:0,19,986	0/0:31,0:30:38.44:0,38,361	./.	0/0:19,1:20:2.37:0,2,375	0/0:23,1:24:20.46:0,20,690	0/0:21,0:20:14.51:0,15,143	0/0:24,0:24:21.22:0,21,348	0/0:24,0:24:47.97:0,48,624	0/1:11,0:11:0.71:1,0,108
chr10	88491147	.	TAG	T	1728.82	PASS	AB=0.813;AC=14;AF=0.250;AN=56;BaseQRankSum=13.323;DP=554;FS=4.188;HRun=0;HaplotypeScore=99.6150;InbreedingCoeff=0.8214;MQ=70.13;MQ0=0;MQRankSum=-11.496;QD=15.72;ReadPosRankSum=1.900;VQSLOD=3.3304;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39.13:0,39,790	0/0:6,0:6:18.06:0,18,366	0/0:11,0:11:17.68:0,18,224	0/1:13,0:12:5.35:5,0,191	1/1:0,16:16:33.03:300,33,0	1/1:0,20:20:51.06:478,51,0	1/1:2,7:9:16.82:140,17,0	0/0:31,0:30:93.31:0,93,1850	0/0:18,0:18:54.19:0,54,1097	0/0:27,0:27:81.28:0,81,1624	0/0:24,0:24:72.25:0,72,1451	1/1:1,14:15:38.53:341,39,0	0/0:23,0:23:69.24:0,69,1402	1/1:3,15:19:50.27:452,50,0	0/0:22,0:22:66.20:0,66,1268	0/0:25,0:25:75.23:0,75,1452	0/0:22,0:22:66.23:0,66,1320	0/1:4,6:10:23.60:64,0,24	0/0:23,0:23:66.18:0,66,1267	0/0:35,0:35:99:0,105,2106	0/0:23,0:23:69.24:0,69,1389	1/1:0,8:8:15.02:139,15,0	0/0:19,0:19:57.20:0,57,1157	0/0:18,0:18:51.18:0,51,1036	0/0:23,0:23:69.24:0,69,1402	0/0:24,0:24:72.24:0,72,1428	0/0:37,0:37:99:0,111,2212	0/0:19,0:19:57.20:0,57,1157
chr10	88491150	.	TGGTTG	T	2914.29	PASS	AB=0.629;AC=11;AF=0.196;AN=56;BaseQRankSum=13.378;DP=553;FS=2.126;HRun=0;HaplotypeScore=126.8969;InbreedingCoeff=0.4057;MQ=68.54;MQ0=0;MQRankSum=-12.025;QD=27.49;ReadPosRankSum=2.779;VQSLOD=3.6280;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.11:0,39,1222	0/0:6,0:6:18.06:0,18,600	0/0:7,0:8:17.25:0,17,352	0/1:12,0:11:19.73:20,0,315	0/1:0,16:16:10.80:503,0,11	1/1:0,20:20:34.13:812,34,0	0/1:0,7:7:20.69:178,0,21	0/0:32,0:32:96.32:0,96,3014	0/0:19,0:19:57.20:0,57,1883	0/0:28,0:28:84.29:0,84,2721	0/0:24,0:24:72.25:0,72,2311	1/1:0,14:14:4.39:527,4,0	0/0:24,0:24:72.25:0,72,2310	1/1:3,15:18:31.16:716,31,0	0/0:20,0:20:60.19:0,60,1923	0/0:24,0:24:72.25:0,72,2383	0/0:22,0:22:66.23:0,66,2125	0/1:5,6:11:98.05:98,0,194	0/0:23,0:23:66.22:0,66,1952	0/0:34,0:34:99:0,102,3319	0/0:25,0:25:75.24:0,75,2345	0/1:0,8:8:20.91:220,0,21	0/0:20,0:20:60.19:0,60,1876	0/0:19,0:19:54.19:0,54,1781	0/0:26,0:26:78.27:0,78,2559	0/0:24,0:24:72.25:0,72,2345	0/0:37,0:37:99:0,111,3652	0/0:19,0:19:57.20:0,57,1898
chr10	88493400	.	C	CAG	4885.29	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-13.124;DP=843;FS=7.892;HRun=0;HaplotypeScore=121.2902;InbreedingCoeff=0.9994;MQ=91.31;MQ0=0;MQRankSum=-0.696;QD=37.87;ReadPosRankSum=2.708;VQSLOD=6.6314;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,169,2146	1/1:2,9:11:24.08:404,24,0	0/0:36,0:36:81.69:0,82,994	0/0:33,0:33:80.70:0,81,930	0/0:18,0:18:51.17:0,51,656	0/0:28,0:28:75.24:0,75,963	0/0:29,0:29:87.28:0,87,1120	0/0:34,0:34:81.25:0,81,1030	1/1:6,29:35:87.30:1451,87,0	1/1:9,23:33:36.62:1107,37,0	1/1:1,18:19:39.13:658,39,0	0/0:36,0:36:96.30:0,96,1220	0/0:29,0:29:75.23:0,75,950	0/0:27,0:27:66.20:0,66,835	0/0:46,0:46:99:0,129,1617	0/0:31,1:32:39.66:0,40,1055	1/1:4,27:31:75.26:1265,75,0	0/0:17,0:17:42.14:0,42,540	0/0:27,0:27:75.23:0,75,949	0/0:26,0:26:66.21:0,66,849	0/0:47,0:47:99:0,132,1655	0/0:30,0:30:69.22:0,69,887	0/0:21,0:21:51.17:0,51,655	0/0:38,0:38:99:0,105,1332	0/0:17,0:17:36.12:0,36,463	0/0:31,0:31:81.26:0,81,1041	0/0:33,0:32:87.28:0,87,1117	0/0:16,0:16:45.15:0,45,578
chr10	88493681	.	GAA	G	4273.82	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=9.683;DP=614;FS=5.537;HRun=7;HaplotypeScore=123.0716;InbreedingCoeff=0.4447;MQ=71.93;MQ0=2;MQRankSum=-3.731;QD=13.15;ReadPosRankSum=2.776;VQSLOD=1.5538;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.22:0,78,1233	0/0:11,0:10:9.66:0,10,29	0/0:30,0:20:27.78:0,28,414	0/0:31,0:25:59.53:0,60,868	1/1:3,16:19:42.13:534,42,0	1/1:1,19:20:48.15:611,48,0	1/1:7,19:26:36.10:458,36,0	0/1:27,0:27:81.77:82,0,129	0/1:19,0:19:30.68:39,0,31	0/1:23,0:18:48.33:49,0,48	0/1:20,0:18:0.64:1,0,68	1/1:1,23:24:57.18:725,57,0	0/0:22,0:22:66.20:0,66,1077	1/1:0,18:18:42.05:513,42,0	0/0:27,0:27:81.24:0,81,1315	0/0:18,0:18:51.15:0,51,815	0/1:36,0:36:65.27:82,0,65	1/1:0,12:12:27.09:344,27,0	0/0:20,0:20:34.45:0,34,605	0/0:24,0:24:69.20:0,69,1100	0/1:13,0:12:44.09:47,0,44	1/1:2,19:21:42.06:515,42,0	0/0:18,0:18:54.08:0,54,788	0/0:21,0:21:60.13:0,60,842	0/0:18,0:18:54.09:0,54,803	0/1:24,0:24:43.19:128,0,43	0/0:21,0:21:60.16:0,60,938	0/1:23,0:23:5.10:147,0,5
chr10	88493686	.	A	AC	1091.87	PASS	AB=0.632;AC=7;AF=0.125;AN=56;BaseQRankSum=3.030;DP=617;FS=1.632;HRun=0;HaplotypeScore=125.6884;InbreedingCoeff=0.5165;MQ=66.03;MQ0=2;MQRankSum=-1.732;QD=9.41;ReadPosRankSum=1.371;VQSLOD=4.0777;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.09:0,81,1113	1/1:5,8:12:20.83:155,21,0	0/0:26,0:16:44.01:0,44,446	0/0:30,0:24:69.16:0,69,865	0/0:18,0:18:42.43:0,42,197	0/0:21,0:21:47.50:0,48,207	0/0:21,0:21:31.16:0,31,124	0/0:27,0:27:72.64:0,73,858	0/1:9,12:21:13.15:231,0,13	0/1:13,15:23:16.93:244,0,17	1/1:7,13:18:14.84:199,15,0	0/0:23,0:23:49.41:0,49,197	0/0:23,0:23:69.20:0,69,943	0/0:19,0:19:39.73:0,40,182	0/0:28,0:28:84.27:0,84,1157	0/0:20,0:20:57.17:0,57,764	0/1:12,22:34:22.91:404,0,23	0/0:12,0:12:23.37:0,23,93	0/0:21,0:21:63.18:0,63,812	0/0:25,0:25:75.23:0,75,1016	0/0:12,0:11:33.06:0,33,400	0/0:21,0:21:39.40:0,39,164	0/0:20,0:20:57.09:0,57,725	0/0:21,0:21:63.20:0,63,864	0/0:19,0:19:53.85:0,54,664	0/0:23,0:23:62.90:0,63,727	0/0:20,0:20:60.20:0,60,837	0/0:23,0:23:69.21:0,69,854
chr10	88493687	.	AAC	A	3684.89	PASS	AB=0.972;AC=21;AF=0.375;AN=56;BaseQRankSum=10.646;DP=626;FS=15.717;HRun=0;HaplotypeScore=127.9088;InbreedingCoeff=0.7628;MQ=65.90;MQ0=2;MQRankSum=-0.647;QD=15.10;ReadPosRankSum=1.806;VQSLOD=3.0051;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:72.19:0,72,1087	0/0:5,0:12:26.99:0,27,233	0/0:26,0:16:2.81:0,3,304	0/0:30,0:24:44.85:0,45,622	0/1:18,0:18:1.96:164,0,2	1/1:22,0:22:7.84:227,8,0	1/1:21,0:21:13.32:164,13,0	1/1:7,20:27:60.10:654,60,0	0/0:9,0:21:44.99:0,45,408	0/0:6,0:23:60.06:0,60,609	0/0:7,0:18:39:0,39,357	1/1:24,0:24:35.87:298,36,0	0/0:23,0:23:60.14:0,60,931	1/1:19,0:19:18.54:200,19,0	0/0:29,0:29:75.22:0,75,1154	0/0:20,0:20:48.13:0,48,725	0/0:13,0:35:68.98:0,69,625	1/1:13,0:13:25.68:136,26,0	0/1:20,2:22:49.48:49,0,537	0/0:26,0:26:65.84:0,66,953	1/1:3,9:11:24.07:293,24,0	0/1:22,0:22:17.12:139,0,17	0/0:20,0:21:48.12:0,48,698	0/0:21,0:21:39.11:0,39,604	0/0:19,0:19:39.42:0,39,289	1/1:4,17:21:54.14:628,54,0	0/0:21,0:21:51.13:0,51,771	1/1:3,20:23:60.19:733,60,0
chr10	88493786	.	GTCC	G	3647.20	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.484;DP=531;FS=21.435;HRun=0;HaplotypeScore=82.2827;InbreedingCoeff=0.9844;MQ=89.43;MQ0=0;MQRankSum=-9.546;QD=40.98;ReadPosRankSum=2.014;VQSLOD=2.9052;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,99,2313	0/0:5,0:5:12.04:0,12,284	0/0:19,0:19:57.20:0,57,1259	0/0:26,0:26:65.75:0,66,1495	1/1:0,12:12:27.01:410,27,0	1/1:0,11:11:30.10:514,30,0	1/1:0,12:12:33.11:582,33,0	0/0:19,0:19:57.18:0,57,1274	0/0:11,0:8:15.05:0,15,354	0/0:25,0:25:72.25:0,72,1701	0/0:15,0:15:42.14:0,42,963	1/1:1,18:19:48.13:784,48,0	0/0:15,0:15:45.15:0,45,1004	1/1:2,10:12:24.08:423,24,0	0/0:26,0:26:72.25:0,72,1683	0/0:27,0:27:78.25:0,78,1781	0/0:30,0:29:78.27:0,78,1814	1/1:0,5:5:12.04:212,12,0	0/0:23,0:23:69.22:0,69,1554	0/0:25,0:25:75.26:0,75,1746	0/0:31,0:31:90.31:0,90,2106	1/1:2,16:18:42.14:724,42,0	0/0:11,0:11:30.10:0,30,690	0/0:17,0:16:48.16:0,48,1135	0/0:18,0:17:54.19:0,54,1277	0/0:24,0:24:72.24:0,72,1659	0/0:26,0:25:75.26:0,75,1767	0/0:8,0:8:21.07:0,21,497
chr10	88493993	.	A	AAAT	2611.46	PASS	AC=10;AF=0.238;AN=42;BaseQRankSum=9.107;DP=393;FS=7.160;HRun=0;HaplotypeScore=96.5291;InbreedingCoeff=0.9468;MQ=68.67;MQ0=2;MQRankSum=-9.881;QD=40.18;ReadPosRankSum=0.054;VQSLOD=4.7371;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:48.10:0,48,681	1/1:3,2:3:6.02:99,6,0	0/0:30,0:19:44.60:0,45,566	0/0:30,0:15:18.21:0,18,278	./.	./.	./.	0/0:34,0:34:93.31:0,93,1547	1/1:2,6:5:12.04:271,12,0	1/1:3,20:22:63.20:1330,63,0	1/1:6,12:14:30.08:557,30,0	./.	0/0:8,0:8:21.07:0,21,358	./.	0/0:14,0:14:36.12:0,36,603	0/0:23,0:22:63.22:0,63,1064	1/1:3,8:10:24.08:508,24,0	./.	0/0:25,0:25:69.22:0,69,1140	0/0:23,0:23:60.16:0,60,900	0/0:10,0:10:24.08:0,24,409	./.	0/0:12,0:12:36.11:0,36,556	0/0:3,0:3:9.03:0,9,148	0/0:16,0:16:48.16:0,48,774	0/0:29,0:29:84.29:0,84,1387	0/0:22,0:22:63.21:0,63,1013	0/0:28,0:28:57.20:0,57,1074
chr10	88494002	.	T	TA	2989.57	PASS	AC=18;AF=0.429;AN=42;BaseQRankSum=-2.490;DP=409;FS=1.382;HRun=10;HaplotypeScore=83.0857;InbreedingCoeff=0.9520;MQ=71.20;MQ0=1;MQRankSum=-5.953;QD=18.23;ReadPosRankSum=0.448;VQSLOD=4.1476;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:41.90:0,42,342	1/1:4,0:4:5.49:24,5,0	0/0:29,0:19:8.79:0,9,132	0/0:31,0:16:21.07:0,21,186	./.	./.	./.	1/1:6,29:35:84.67:883,85,0	1/1:8,0:7:16.47:72,16,0	1/1:24,0:26:47.62:236,48,0	1/1:16,0:16:33.18:161,33,0	./.	0/0:9,0:9:23.96:0,24,195	./.	0/0:15,0:15:32.94:0,33,269	0/0:20,0:19:41.93:0,42,345	1/1:9,0:10:22.05:99,22,0	./.	0/0:31,0:30:77.37:0,77,619	0/0:21,0:22:61.95:0,62,496	1/1:0,9:9:24.06:256,24,0	./.	0/0:17,0:17:44.94:0,45,369	0/0:3,0:3:8.99:0,9,74	0/0:18,0:18:41.92:0,42,345	1/1:1,28:29:84.13:866,84,0	0/0:28,0:26:71.78:0,72,580	1/1:8,18:26:54.14:575,54,0
chr10	88494009	.	A	AAAT	3087.03	PASS	AC=16;AF=0.333;AN=48;BaseQRankSum=5.557;DP=413;FS=3.147;HRun=0;HaplotypeScore=89.4831;InbreedingCoeff=0.8704;MQ=71.46;MQ0=1;MQRankSum=-7.143;QD=42.88;ReadPosRankSum=-0.473;VQSLOD=5.0409;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:48.14:0,48,711	1/1:3,2:5:12.01:174,12,0	0/0:25,0:15:7.67:0,8,222	0/0:30,0:16:32.32:0,32,385	1/1:1,0:1:3:26,3,0	1/1:1,0:1:3:27,3,0	./.	0/0:37,0:37:91.41:0,91,447	1/1:2,8:9:18.06:375,18,0	1/1:2,19:24:72.18:1301,72,0	1/1:2,17:19:47.90:846,48,0	./.	0/0:12,0:12:27.08:0,27,403	./.	0/0:13,0:13:36.12:0,36,547	0/0:17,0:16:48.14:0,48,701	1/1:1,10:11:24.08:489,24,0	./.	0/0:31,0:30:81.26:0,81,1230	0/0:24,0:24:69.20:0,69,993	0/0:9,0:9:21.43:0,21,86	1/1:1,0:1:3:26,3,0	0/0:19,0:19:54.16:0,54,788	0/0:3,0:3:9.03:0,9,141	0/0:17,0:17:48.14:0,48,682	0/0:32,0:32:76.85:0,77,332	0/0:31,0:29:87.22:0,87,1228	0/0:20,0:20:51.20:0,51,216
chr10	88494911	.	G	GCCCTCC	4741.94	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=6.423;DP=358;FS=0.000;HRun=0;HaplotypeScore=82.2728;InbreedingCoeff=0.8129;MQ=82.12;MQ0=0;MQRankSum=-9.563;QD=69.73;ReadPosRankSum=-3.092;VQSLOD=4.3138;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.16:0,48,1134	0/0:13,0:13:39.13:0,39,877	0/1:11,0:11:11.62:12,0,496	0/0:11,0:11:29.63:0,30,595	0/0:16,0:16:48.15:0,48,1082	0/0:21,0:21:60.21:0,60,1393	0/0:11,0:11:30.10:0,30,689	1/1:3,17:21:54.13:1508,54,0	0/0:10,0:10:30.10:0,30,695	0/0:16,0:16:42.12:0,42,920	0/0:20,0:20:57.18:0,57,1301	0/0:11,0:11:33.11:0,33,761	0/0:5,0:5:12.04:0,12,284	0/0:7,0:7:21.07:0,21,496	0/0:8,0:8:24.08:0,24,567	0/0:8,0:8:24.08:0,24,529	0/0:22,0:22:66.18:0,66,1420	0/0:14,0:15:45.15:0,45,989	0/0:14,0:14:33.11:0,33,744	0/0:15,0:15:45.15:0,45,995	1/1:1,2:4:9.03:315,9,0	0/0:2,0:2:6.02:0,6,142	0/0:3,0:3:9.03:0,9,211	0/0:8,0:8:24.07:0,24,502	0/0:17,0:17:48.15:0,48,1087	1/1:1,14:15:42.14:1469,42,0	0/0:20,0:20:60.20:0,60,1373	1/1:3,14:17:42.14:1438,42,0
chr10	88495185	.	G	GA	1586.18	PASS	AB=0.933;AC=7;AF=0.125;AN=56;BaseQRankSum=2.455;DP=475;FS=8.773;HRun=7;HaplotypeScore=59.7449;InbreedingCoeff=0.8123;MQ=55.96;MQ0=4;MQRankSum=-5.986;QD=20.87;ReadPosRankSum=-1.636;VQSLOD=2.2141;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,105,1008	0/0:5,0:5:15.02:0,15,145	0/0:14,2:8:21.01:0,21,192	0/0:13,0:4:8.96:0,9,74	0/0:10,0:10:24.03:0,24,232	0/0:14,0:14:42.07:0,42,405	0/0:20,0:20:48.07:0,48,463	1/1:13,17:26:51.06:563,51,0	0/0:11,0:11:33.05:0,33,318	0/0:13,0:13:33.05:0,33,318	0/0:12,0:12:27.03:0,27,256	0/0:18,0:18:42.04:0,42,400	0/0:10,0:10:24.03:0,24,231	0/0:15,0:15:36.04:0,36,342	0/0:16,0:16:41.98:0,42,394	0/0:14,0:14:33.03:0,33,314	0/0:34,0:34:87.10:0,87,831	0/0:14,0:14:27.01:0,27,253	0/0:23,0:20:42.05:0,42,402	0/0:12,0:12:30.04:0,30,290	1/1:12,5:17:36.11:435,36,0	0/0:8,0:8:21.03:0,21,201	0/0:10,0:10:24.04:0,24,232	0/0:23,0:23:60.07:0,60,575	0/0:20,0:20:54.08:0,54,521	0/1:13,1:14:24.88:267,0,25	0/0:25,0:25:57.08:0,57,550	1/1:7,8:15:39.12:470,39,0
chr10	88495196	.	TA	T	3606.35	PASS	AB=0.866;AC=23;AF=0.411;AN=56;BaseQRankSum=9.186;DP=497;FS=9.191;HRun=11;HaplotypeScore=54.8216;InbreedingCoeff=0.7759;MQ=58.04;MQ0=2;MQRankSum=-1.308;QD=16.77;ReadPosRankSum=0.393;VQSLOD=4.2384;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,1:47:99:0,111,1358	0/0:5,0:5:12.02:0,12,122	0/0:15,0:11:14.96:0,15,137	0/0:8,0:7:15.03:0,15,156	1/1:0,14:14:38.95:320,39,0	1/1:2,15:17:44.93:369,45,0	1/1:2,16:18:44.94:369,45,0	1/1:8,21:28:56.69:466,57,0	0/0:14,0:14:39.10:0,39,416	0/0:16,0:16:33.08:0,33,352	0/0:10,0:10:2.54:0,3,231	1/1:3,16:19:44.94:369,45,0	0/0:11,0:11:29.74:0,30,294	1/1:3,10:13:26.96:222,27,0	0/0:18,0:18:40.34:0,40,413	0/0:15,0:15:42.11:0,42,447	0/0:34,0:34:97.11:0,97,1015	1/1:4,10:14:20.96:172,21,0	0/0:23,0:21:51.10:0,51,534	0/1:12,1:13:0.58:1,0,200	1/1:13,7:20:47.93:394,48,0	1/1:1,8:9:23.96:196,24,0	0/0:8,0:8:21.04:0,21,217	0/0:27,0:27:25.76:0,26,556	1/1:3,18:21:50.93:419,51,0	0/1:7,3:10:37.01:145,0,37	0/0:28,0:31:69.03:0,69,712	0/1:16,2:18:36.75:163,0,37
chr10	88496017	.	CAGAGAGAG	C	364.13	PASS	AB=0.854;AC=12;AF=0.240;AN=50;BaseQRankSum=1.378;DP=553;FS=1.896;HRun=0;HaplotypeScore=149.1939;InbreedingCoeff=0.5191;MQ=67.14;MQ0=11;MQRankSum=1.822;QD=3.03;ReadPosRankSum=2.417;VQSLOD=2.5504;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:25:23.23:0,23,294	0/0:7,0:7:3.01:0,3,49	./.	./.	0/1:12,3:15:8.50:51,0,8	1/1:9,2:11:5.85:88,6,0	1/1:21,3:24:5.93:63,6,0	0/0:29,0:28:18.48:0,18,189	0/0:17,0:17:19.51:0,20,221	0/0:23,0:23:28.89:0,29,448	0/0:11,0:11:9.03:0,9,220	1/1:12,1:15:8.99:128,9,0	0/0:22,0:22:22.48:0,22,274	1/1:21,2:22:6.42:100,6,0	0/0:23,0:22:21.65:0,22,341	0/0:16,0:16:8.70:0,9,95	0/0:19,0:17:11.71:0,12,196	1/1:11,0:10:4.83:46,5,0	0/0:8,0:7:3:0,3,27	./.	0/0:27,0:26:9.48:0,9,115	0/1:18,2:19:17.51:37,0,18	0/0:16,0:17:9.03:0,9,178	0/0:29,0:27:19.61:0,20,273	0/0:10,0:10:2.84:0,3,14	0/0:28,0:28:31.94:0,32,319	0/0:18,0:16:11.98:0,12,154	0/0:7,0:7:5.75:0,6,56
chr10	88496069	.	CAGACAGAGAGAGAGAGAGAGAGAG	C	545.13	PASS	AB=1.000;AC=13;AF=0.250;AN=52;BaseQRankSum=0.967;DP=509;FS=5.766;HRun=0;HaplotypeScore=174.9605;InbreedingCoeff=0.0500;MQ=40.70;MQ0=43;MQRankSum=-1.745;QD=3.03;ReadPosRankSum=-1.918;VQSLOD=2.3189;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:22:5.03:5,0,99	0/0:8,0:8:15.04:0,15,371	0/0:6,0:2:6.02:0,6,85	0/0:19,0:3:2.65:0,3,19	0/0:13,22:32:3.01:0,3,46	0/1:16,0:14:31.22:151,0,31	1/1:16,0:15:1.56:43,2,0	0/0:8,0:15:3.84:0,4,11	0/0:23,0:20:41.89:0,42,1028	0/0:33,0:31:80.11:0,80,1770	0/0:23,0:22:42.13:0,42,1197	0/1:19,0:17:1.31:8,0,1	0/1:12,0:11:4.16:4,0,35	0/1:12,0:10:10.54:140,0,11	0/0:20,0:15:12.33:0,12,82	0/1:14,0:12:10.74:11,0,30	0/0:23,0:20:34.37:0,34,681	0/1:17,0:16:4.79:232,0,5	0/1:8,0:4:2.73:14,0,3	./.	0/1:26,0:19:40.35:40,0,61	0/0:7,11:17:6.45:0,6,68	0/0:14,0:13:8.94:0,9,67	0/0:26,0:22:1.91:0,2,88	./.	0/0:20,0:16:22.59:0,23,177	1/1:10,0:9:3.41:31,3,0	0/0:8,0:4:5.93:0,6,54
chr10	88496127	.	C	CAG	4400.96	PASS	AB=0.769;AC=20;AF=0.385;AN=52;BaseQRankSum=-6.613;DP=773;FS=5.463;HRun=0;HaplotypeScore=113.9700;InbreedingCoeff=0.7101;MQ=56.73;MQ0=36;MQRankSum=-0.317;QD=15.89;ReadPosRankSum=3.568;VQSLOD=4.5139;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,29:40:4.15:302,4,0	0/0:8,0:8:21.06:0,21,259	0/0:77,0:11:4.40:0,4,19	0/0:83,0:16:2.67:0,3,13	0/0:36,0:36:39.03:0,39,491	0/0:28,0:27:63.18:0,63,777	0/0:28,0:28:66.21:0,66,837	1/1:13,0:12:9.65:146,10,0	0/0:28,0:28:69.22:0,69,876	0/0:30,0:29:75.20:0,75,945	0/0:21,0:21:51.14:0,51,633	0/0:29,0:29:54.17:0,54,685	1/1:3,15:18:29.93:466,30,0	0/0:19,0:19:48.12:0,48,593	1/1:3,20:22:30.10:502,30,0	1/1:3,20:22:1.78:329,2,0	0/0:28,0:27:58.47:0,58,801	0/0:24,0:24:24.31:0,24,616	1/1:5,16:19:51.12:747,51,0	0/1:5,31:36:8.35:383,0,8	0/0:19,0:18:1.82:0,2,5	0/0:22,0:22:32.85:0,33,419	./.	1/1:8,30:38:40.87:701,41,0	1/1:5,16:21:21.07:338,21,0	0/1:20,0:20:69.01:86,0,69	1/1:3,21:24:24.08:401,24,0	./.
chr10	88496135	.	GAGAC	G	1395.98	PASS	AB=0.860;AC=11;AF=0.196;AN=56;BaseQRankSum=4.492;DP=770;FS=3.319;HRun=0;HaplotypeScore=134.4230;InbreedingCoeff=0.2395;MQ=53.29;MQ0=30;MQRankSum=-7.361;QD=5.82;ReadPosRankSum=-4.921;VQSLOD=0.4008;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:45:24.58:25,0,337	0/0:7,0:7:21.07:0,21,408	0/0:58,0:8:6.99:0,7,33	0/1:65,0:10:1.94:2,0,8	0/0:35,0:35:45.09:0,45,1078	0/0:28,0:27:69.22:0,69,1705	0/0:28,0:28:47.26:0,47,1434	1/1:1,17:17:42.09:552,42,0	0/0:29,0:29:81.16:0,81,1932	0/0:34,0:33:93.27:0,93,2114	0/0:22,0:22:54.15:0,54,1169	0/0:32,0:32:69.20:0,69,1617	0/0:19,0:19:30.83:0,31,481	0/0:22,0:22:60.18:0,60,1419	0/0:25,0:25:39.08:0,39,578	0/1:25,0:24:15.84:16,0,314	0/0:27,0:26:65.98:0,66,1574	0/0:26,0:25:32.99:0,33,1327	0/1:23,0:20:99:146,0,384	0/0:36,0:36:36.04:0,36,560	0/1:1,20:20:0:0,0,0	0/0:20,0:20:35.87:0,36,914	0/0:15,0:15:3.01:0,3,48	0/0:40,0:40:39.13:0,39,692	0/1:19,0:19:12.59:13,0,176	0/1:2,20:22:94.72:759,0,95	0/0:27,0:27:42.07:0,42,630	1/1:1,0:1:3:25,3,0
chr10	88496429	.	CAG	C	338.98	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.594;DP=871;FS=2.318;HRun=0;HaplotypeScore=118.0930;InbreedingCoeff=0.9940;MQ=66.11;MQ0=4;MQRankSum=1.993;QD=22.60;ReadPosRankSum=-1.911;VQSLOD=3.5641;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,126,2115	0/0:11,0:11:33.11:0,33,565	0/0:41,0:25:19.70:0,20,775	0/0:59,0:37:43.33:0,43,555	0/0:31,0:31:81.28:0,81,1378	0/0:23,0:23:63.19:0,63,1022	0/0:25,0:25:63.22:0,63,1076	0/0:39,0:39:99:0,99,1631	0/0:29,0:29:78.27:0,78,1325	0/0:37,0:37:99:0,102,1709	0/0:25,0:25:63.22:0,63,1078	0/0:20,0:20:51.16:0,51,848	0/0:34,0:34:93.32:0,93,1576	0/0:36,0:36:99:0,102,1694	0/0:42,0:42:99:0,114,1928	0/0:33,0:33:84.27:0,84,1414	0/0:31,0:31:81.24:0,81,1326	0/0:25,0:25:63.13:0,63,1017	0/0:31,0:31:81.26:0,81,1360	0/0:28,0:28:63.21:0,63,1058	0/0:31,0:31:78.25:0,78,1306	0/0:32,0:32:90.28:0,90,1490	0/0:22,0:22:48.15:0,48,794	0/0:31,0:31:81.20:0,81,1318	1/1:2,13:15:33.11:434,33,0	0/0:40,0:40:99:0,105,1799	0/0:31,0:31:87.27:0,87,1455	0/0:20,0:20:57.20:0,57,977
chr10	88496630	.	GGAGAGA	G	483.82	PASS	AB=0.981;AC=13;AF=0.260;AN=50;BaseQRankSum=3.554;DP=640;FS=10.771;HRun=0;HaplotypeScore=153.2113;InbreedingCoeff=0.1794;MQ=69.62;MQ0=15;MQRankSum=-2.722;QD=2.53;ReadPosRankSum=-0.309;VQSLOD=2.2335;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:30:51.58:0,52,914	./.	./.	./.	0/0:20,0:20:5.96:0,6,44	0/1:17,0:16:14.94:71,0,15	0/1:28,0:27:51.95:56,0,52	0/1:25,0:24:21.92:22,0,107	0/0:14,0:22:2.21:0,2,25	1/1:15,0:15:8.80:94,9,0	0/1:14,0:15:2.94:20,0,3	0/0:17,0:17:13.55:0,14,122	0/0:15,0:17:24.08:0,24,565	0/0:18,0:18:6.84:0,7,37	0/0:22,0:25:21.07:0,21,512	0/0:23,0:23:27.06:0,27,608	1/1:11,9:20:9.03:182,9,0	0/1:13,0:13:69.56:70,0,94	0/0:24,0:22:24.88:0,25,541	0/0:14,0:14:3.01:0,3,64	0/0:29,0:32:26.31:0,26,570	0/1:18,0:18:65.33:65,0,67	0/0:14,0:17:12.03:0,12,198	0/0:27,0:28:38.26:0,38,1042	1/1:8,0:14:4.81:31,5,0	0/1:24,2:26:22.66:23,0,833	0/0:30,0:29:36.11:0,36,856	0/0:20,0:20:20.96:0,21,359
chr10	88496669	.	GAGAGAGAA	G	465.90	PASS	AB=0.780;AC=6;AF=0.107;AN=56;BaseQRankSum=5.519;DP=609;FS=11.085;HRun=0;HaplotypeScore=153.6864;InbreedingCoeff=-0.1287;MQ=60.60;MQ0=13;MQRankSum=-2.016;QD=5.12;ReadPosRankSum=-0.017;VQSLOD=1.7772;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:81.13:0,81,1614	0/0:8,0:8:20.98:0,21,189	0/0:26,0:13:0.88:0,1,238	0/0:34,0:13:18.33:0,18,238	0/1:18,0:18:9:9,0,38	0/1:4,11:15:14.94:155,0,15	0/1:4,12:15:50.81:82,0,51	0/0:41,0:39:89.50:0,89,1075	0/0:17,0:17:30.06:0,30,376	0/0:22,0:22:51.91:0,52,764	0/0:14,0:14:16.17:0,16,419	0/1:16,0:15:99:100,0,116	0/0:18,0:17:48.10:0,48,1040	0/0:16,0:16:8.51:0,9,52	0/0:22,0:22:51.12:0,51,1103	0/0:19,0:19:48.14:0,48,1182	0/0:25,0:25:26.69:0,27,296	0/1:3,7:10:96.31:157,0,96	0/0:22,0:20:60.07:0,60,998	0/0:16,0:16:36.37:0,36,362	0/0:39,0:39:78.86:0,79,1411	0/1:15,1:16:64.68:84,0,65	0/0:20,0:20:56.97:0,57,868	0/0:30,0:28:75.14:0,75,1778	0/0:20,0:20:3.76:0,4,302	0/0:26,0:26:65.96:0,66,1491	0/0:23,0:22:51.61:0,52,1224	0/0:28,0:28:74.17:0,74,951
chr10	88496673	.	GAGAA	G	470.77	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=5.933;DP=583;FS=17.759;HRun=0;HaplotypeScore=111.0844;InbreedingCoeff=0.6898;MQ=63.00;MQ0=13;MQRankSum=-2.446;QD=5.23;ReadPosRankSum=-0.845;VQSLOD=1.1693;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:63.07:0,63,927	0/0:7,0:7:20.98:0,21,193	0/0:26,0:13:19.17:0,19,269	0/0:35,0:15:22.61:0,23,276	1/1:16,0:16:5.02:65,5,0	1/1:12,0:12:6.02:79,6,0	0/1:15,0:14:10.92:46,0,11	0/0:40,0:38:87.72:0,88,929	0/0:17,0:17:11.31:0,11,223	0/0:24,0:24:65.74:0,66,657	0/0:13,0:13:22.47:0,22,300	1/1:10,2:11:23.40:203,23,0	0/0:20,0:19:51.09:0,51,719	1/1:1,13:14:5.56:111,6,0	0/0:18,0:18:51.07:0,51,717	0/0:18,0:18:42.10:0,42,726	0/0:27,0:27:28.92:0,29,352	0/1:9,0:9:21.54:64,0,22	0/0:24,0:22:38.79:0,39,714	0/0:16,0:16:37.65:0,38,307	0/0:38,0:38:81.89:0,82,1000	1/1:3,9:12:8.13:65,8,0	0/0:20,0:20:56.48:0,56,552	0/0:31,0:29:52.41:0,52,1066	0/0:21,0:21:41.96:0,42,370	0/0:25,0:25:55.20:0,55,950	0/0:19,0:18:43.41:0,43,647	0/0:25,0:25:60.94:0,61,633
chr10	88498816	.	GA	G	3843.18	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=11.262;DP=520;FS=5.819;HRun=9;HaplotypeScore=88.0446;InbreedingCoeff=0.9903;MQ=69.45;MQ0=0;MQRankSum=-1.986;QD=23.01;ReadPosRankSum=2.986;VQSLOD=4.3953;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,11:14:24.01:220,24,0	0/0:4,0:4:12:0,12,125	0/0:10,0:10:24.06:0,24,256	0/0:10,1:11:16.40:0,16,176	0/0:7,0:30:60.04:0,60,320	0/0:3,0:26:66.51:0,67,351	0/0:0,0:11:28.41:0,28,144	0/0:31,0:32:69.20:0,69,788	0/0:18,0:18:48.14:0,48,554	0/0:26,0:26:75.22:0,75,864	0/0:23,1:24:44.76:0,45,761	0/0:2,0:16:34.09:0,34,173	1/1:1,15:16:42.02:384,42,0	0/0:5,0:20:51.10:0,51,263	1/1:0,19:19:51.02:467,51,0	1/1:0,11:11:33.02:302,33,0	0/0:31,0:31:90.25:0,90,1027	0/0:6,0:34:70.72:0,71,374	1/1:2,10:12:30.02:274,30,0	1/1:5,20:25:57.02:522,57,0	0/0:6,0:6:15.02:0,15,161	0/0:1,0:11:31.42:0,31,179	1/1:2,17:19:48.03:439,48,0	1/1:0,10:10:30.02:275,30,0	1/1:2,13:15:36:329,36,0	0/0:25,0:25:66.20:0,66,761	1/1:1,25:26:69.03:631,69,0	0/0:18,0:18:54.16:0,54,623
chr10	88501854	.	T	TA	3603.75	PASS	AB=0.732;AC=37;AF=0.661;AN=56;BaseQRankSum=-2.284;DP=532;FS=8.281;HRun=14;HaplotypeScore=65.3570;InbreedingCoeff=-0.0062;MQ=72.93;MQ0=3;MQRankSum=-0.918;QD=8.06;ReadPosRankSum=0.322;VQSLOD=2.2167;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,13:24:64.58:109,0,65	0/1:9,1:10:11.56:12,0,62	0/0:34,0:18:10.35:0,10,52	0/1:28,0:16:23.23:29,0,23	0/1:6,6:13:16.62:121,0,17	0/1:19,8:31:36.09:316,0,36	1/1:8,12:20:2.97:141,3,0	0/1:27,4:31:15.54:191,0,16	0/0:12,0:14:39.55:0,40,242	0/0:10,0:10:8.28:0,8,57	0/1:14,2:18:14.44:14,0,151	1/1:3,13:17:0.09:104,0,0	1/1:5,10:17:10.63:195,11,0	0/1:6,14:20:16.12:19,0,16	1/1:14,13:28:7.88:168,8,0	1/1:4,19:23:42.46:370,42,0	0/0:21,1:24:8.04:0,8,177	1/1:4,10:14:6.70:157,7,0	1/1:12,12:25:6.27:287,6,0	1/1:8,6:15:0.35:100,0,0	0/1:1,6:7:4.27:90,0,4	1/1:6,5:11:10.05:129,10,0	0/1:4,11:16:4.26:185,0,4	1/1:2,11:14:27.92:215,28,0	1/1:1,2:12:17.83:110,18,0	1/1:6,14:20:0.33:231,0,0	1/1:17,7:24:17.22:248,17,0	0/1:3,6:9:23.53:64,0,24
chr10	88502025	.	TGTGTGTGTGTAGTA	T	5222.39	PASS	AB=1.000;AC=30;AF=0.556;AN=54;BaseQRankSum=-5.530;DP=393;FS=39.973;HRun=0;HaplotypeScore=141.4262;InbreedingCoeff=-0.1183;MQ=49.28;MQ0=21;MQRankSum=-2.367;QD=17.88;ReadPosRankSum=-6.385;VQSLOD=-0.4455;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:24.08:0,24,424	0/0:7,0:7:3.48:0,3,93	./.	0/1:21,0:10:99:148,0,152	1/1:0,17:17:38.87:985,39,0	1/1:3,16:18:15.05:603,15,0	1/1:0,17:17:9.03:397,9,0	0/1:19,0:16:99:202,0,770	0/0:12,0:11:15.05:0,15,489	0/1:16,0:16:99:143,0,639	1/1:6,0:6:2.97:20,3,0	1/1:1,10:11:6.02:265,6,0	0/1:12,0:12:99:179,0,440	1/1:1,9:10:12.04:506,12,0	0/1:6,0:6:99:106,0,126	0/1:17,0:17:99:207,0,642	0/0:25,0:24:17.98:0,18,818	1/1:1,9:10:6.02:245,6,0	0/1:9,0:9:46.09:46,0,548	0/0:14,0:14:12.52:0,13,819	0/1:19,0:17:99:130,0,426	1/1:0,7:7:11.95:265,12,0	0/1:12,0:12:99:106,0,379	0/1:22,0:22:99:111,0,892	0/1:12,0:12:1.90:2,0,204	0/1:12,0:12:99:280,0,265	0/1:10,0:10:86.41:86,0,121	0/1:8,0:7:99:191,0,193
chr10	88502033	.	TGTAGTA	T	7652.66	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=0.162;DP=389;FS=39.452;HRun=0;HaplotypeScore=97.9224;InbreedingCoeff=-0.2044;MQ=57.48;MQ0=16;MQRankSum=2.770;QD=19.67;ReadPosRankSum=1.886;VQSLOD=2.7415;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:24:15.05:384,15,0	1/1:7,0:7:2.61:12,3,0	1/1:15,0:6:18.06:356,18,0	0/1:21,0:11:16.28:361,0,16	1/1:17,0:17:38.86:482,39,0	1/1:18,0:18:15:243,15,0	1/1:17,0:17:9.03:170,9,0	0/1:16,0:14:86.22:341,0,86	0/1:12,0:11:28.18:28,0,28	1/1:15,0:15:20.89:628,21,0	1/1:9,0:9:8.94:102,9,0	1/1:10,0:10:6.02:113,6,0	1/1:14,0:14:4.01:341,4,0	1/1:10,0:10:12.04:223,12,0	1/1:8,0:8:20.82:346,21,0	1/1:17,0:17:21.71:467,22,0	1/1:22,0:21:21.55:123,22,0	1/1:10,0:10:6.02:113,6,0	0/1:9,0:9:9.26:231,0,9	0/1:14,0:14:30.86:224,0,31	0/1:20,0:18:6.32:396,0,6	1/1:7,0:7:11.87:113,12,0	0/1:11,0:11:9.13:224,0,9	1/1:20,0:20:21.66:361,22,0	1/1:3,8:11:17.95:345,18,0	1/1:12,0:12:30.10:597,30,0	0/1:14,0:14:15.13:124,0,15	0/1:8,0:7:4.66:205,0,5
chr10	88502035	.	TAGTA	T	8892.46	PASS	AB=0.760;AC=55;AF=0.982;AN=56;BaseQRankSum=-2.538;DP=369;FS=6.832;HRun=0;HaplotypeScore=81.2936;InbreedingCoeff=-0.0441;MQ=58.87;MQ0=13;MQRankSum=0.677;QD=24.10;ReadPosRankSum=0.461;VQSLOD=4.0484;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:22:15.05:220,15,0	1/1:0,6:7:2.84:39,3,0	1/1:9,6:7:18.06:356,18,0	0/1:13,5:11:16.27:361,0,16	1/1:17,0:17:38.86:398,39,0	1/1:17,0:17:15.01:189,15,0	1/1:17,0:17:9.03:128,9,0	1/1:2,5:8:21.07:418,21,0	1/1:2,5:9:12:150,12,0	1/1:0,12:14:42.13:816,42,0	1/1:1,9:10:8.90:101,9,0	1/1:10,0:10:6.02:85,6,0	1/1:9,1:12:27.94:465,28,0	1/1:10,0:10:12.04:167,12,0	1/1:8,0:9:24.04:433,24,0	1/1:13,0:18:44.30:625,44,0	1/1:1,12:21:29.65:302,30,0	1/1:10,0:10:6.02:85,6,0	1/1:5,1:9:23.11:337,23,0	1/1:9,0:13:24.37:376,24,0	1/1:11,1:16:34.33:504,34,0	1/1:7,0:7:11.91:102,12,0	1/1:7,1:10:20.13:390,20,0	1/1:15,2:20:47.80:627,48,0	1/1:11,0:11:16.82:200,17,0	1/1:0,8:11:30.10:615,30,0	1/1:1,10:14:9.87:141,10,0	1/1:3,0:6:16.26:263,16,0
chr10	88502038	.	TA	T	4252.68	PASS	AB=0.955;AC=55;AF=0.982;AN=56;BaseQRankSum=-0.439;DP=359;FS=4.040;HRun=1;HaplotypeScore=83.6872;InbreedingCoeff=-0.0424;MQ=59.54;MQ0=10;MQRankSum=-0.839;QD=11.85;ReadPosRankSum=0.523;VQSLOD=3.3034;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:13.72:59,14,0	1/1:6,1:7:2.94:42,3,0	1/1:14,0:7:17.89:148,18,0	0/1:20,1:13:95.08:144,0,95	1/1:17,0:17:34.14:189,34,0	1/1:17,0:17:11.11:50,11,0	1/1:17,0:17:8.23:35,8,0	1/1:6,2:7:20.89:169,21,0	1/1:5,2:8:11.26:104,11,0	1/1:12,2:14:41.48:312,41,0	1/1:10,0:10:8.42:60,8,0	1/1:10,0:10:5.49:23,5,0	1/1:10,1:12:32.35:258,32,0	1/1:10,0:10:11.11:50,11,0	1/1:7,1:8:23.63:171,24,0	1/1:12,4:18:43.42:363,43,0	1/1:13,9:21:27.38:311,27,0	1/1:10,0:10:5.49:23,5,0	1/1:4,2:7:20.73:185,21,0	1/1:8,1:12:31.04:240,31,0	1/1:17,1:17:31.50:212,31,0	1/1:8,0:8:8.68:52,9,0	1/1:8,0:10:22.94:162,23,0	1/1:15,3:18:41.53:366,42,0	1/1:9,0:9:13.95:67,14,0	1/1:8,3:11:29.79:222,30,0	1/1:10,2:13:11.07:64,11,0	1/1:5,3:7:20.82:172,21,0
chr10	88502137	.	C	CT	162.53	PASS	AB=0.746;AC=6;AF=0.111;AN=54;BaseQRankSum=4.438;DP=224;FS=4.606;HRun=1;HaplotypeScore=38.4480;InbreedingCoeff=-0.0028;MQ=67.46;MQ0=0;MQRankSum=-3.758;QD=3.07;ReadPosRankSum=3.488;VQSLOD=-0.0593;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:11.95:0,12,120	0/1:3,1:4:34.46:34,0,110	0/0:7,0:6:11.12:0,11,139	0/0:14,0:10:24:0,24,266	0/0:5,0:5:9.03:0,9,126	0/0:11,1:12:23.59:0,24,320	0/0:2,1:3:4.58:0,5,79	0/0:5,0:4:15.03:0,15,174	0/0:3,2:5:7.61:0,8,120	0/1:11,4:15:99:124,0,354	0/0:9,1:10:9.03:0,9,122	0/0:2,2:4:4.10:0,4,77	1/1:1,1:2:1.25:3,1,0	0/0:7,0:7:12.01:0,12,143	0/0:4,0:4:3.01:0,3,40	0/0:6,0:6:12.04:0,12,162	0/0:12,0:12:18.06:0,18,236	0/0:7,0:7:16.24:0,16,173	0/0:12,0:10:30.04:0,30,373	0/0:6,2:8:12.51:0,13,165	0/0:7,0:7:18:0,18,217	0/0:5,0:5:12.04:0,12,166	0/1:8,8:16:26.22:26,0,62	./.	0/0:10,0:10:21.03:0,21,260	0/0:11,0:11:27.09:0,27,364	0/1:10,6:16:84.11:84,0,295	0/0:5,0:5:15.05:0,15,206
chr10	88502144	.	T	TC	319.51	PASS	AC=28;AF=0.933;AN=30;BaseQRankSum=-1.734;DP=44;FS=0.000;HRun=2;HaplotypeScore=12.4863;InbreedingCoeff=0.0523;MQ=43.17;MQ0=0;MQRankSum=1.561;QD=10.65;ReadPosRankSum=1.561;VQSLOD=1.5312;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	1/1:2,0:1:2.04:6,2,0	0/0:5,0:2:1.55:0,2,4	1/1:1,0:1:2.99:24,3,0	./.	1/1:1,0:1:3:25,3,0	1/1:1,0:1:3:25,3,0	./.	1/1:4,0:4:8.70:51,9,0	./.	./.	./.	./.	./.	1/1:2,0:2:3:25,3,0	1/1:6,0:6:5.96:43,6,0	1/1:2,1:3:2.94:18,3,0	1/1:2,1:3:5.98:49,6,0	1/1:1,0:1:3:25,3,0	1/1:2,1:3:5.93:42,6,0	./.	1/1:1,0:1:2.99:24,3,0	./.	1/1:1,0:1:2.88:15,3,0	./.	./.	1/1:1,0:1:2.99:24,3,0
chr10	88502899	.	G	GA	2721.18	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-12.695;DP=685;FS=2.514;HRun=8;HaplotypeScore=65.6740;InbreedingCoeff=0.9795;MQ=78.93;MQ0=0;MQRankSum=-2.031;QD=25.92;ReadPosRankSum=-3.243;VQSLOD=3.2031;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.01:0,48,433	0/0:13,0:13:39.02:0,39,357	0/0:15,0:14:29.74:0,30,255	0/0:19,0:20:23.04:0,23,247	0/0:28,0:28:84.02:0,84,759	0/0:32,0:31:84.04:0,84,769	0/0:21,0:21:57.02:0,57,522	1/1:8,19:27:8.24:593,8,0	0/0:24,0:24:59.98:0,60,539	0/0:22,0:23:62.06:0,62,552	0/0:23,0:23:69.04:0,69,631	0/0:31,0:31:87.04:0,87,796	0/0:39,0:39:99:0,102,933	0/0:23,0:23:57.01:0,57,517	0/0:23,0:23:60.03:0,60,549	0/0:25,0:26:59.05:0,59,527	0/0:23,0:24:56.06:0,56,500	0/0:17,0:17:38.97:0,39,349	0/0:25,0:25:63.01:0,63,570	0/0:35,0:35:87.04:0,87,796	1/1:4,27:31:75.17:850,75,0	0/0:19,0:19:54.01:0,54,489	0/0:27,0:27:78.04:0,78,714	0/0:28,0:28:75.04:0,75,686	0/0:23,0:23:66.02:0,66,600	1/1:5,32:38:99:1122,99,0	0/0:23,0:23:60.03:0,60,549	1/1:0,9:9:27.08:312,27,0
chr10	88502966	.	TA	T	590.30	PASS	AB=0.923;AC=3;AF=0.054;AN=56;BaseQRankSum=5.201;DP=641;FS=0.843;HRun=4;HaplotypeScore=62.7503;InbreedingCoeff=0.6989;MQ=76.33;MQ0=0;MQRankSum=0.094;QD=15.53;ReadPosRankSum=1.857;VQSLOD=2.7572;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.21:0,66,897	0/1:11,1:12:5.90:6,0,348	0/0:13,0:13:36.11:0,36,480	0/0:12,0:13:22.95:0,23,410	0/0:35,0:35:99:0,102,1427	0/0:33,0:33:90.30:0,90,1258	0/0:18,0:18:48.14:0,48,654	0/0:34,0:34:93.30:0,93,1272	0/0:28,0:28:81.27:0,81,1134	0/0:21,0:21:60.20:0,60,840	0/0:26,0:26:75.24:0,75,1034	0/0:21,0:21:60.20:0,60,839	0/0:33,0:33:93.31:0,93,1302	0/0:15,0:15:42.13:0,42,572	0/0:26,0:26:72.24:0,72,1008	0/0:31,0:31:90.28:0,90,1228	0/0:18,0:18:45.15:0,45,628	0/0:18,0:18:48.16:0,48,672	0/0:18,0:18:48.16:0,48,671	0/0:23,0:23:63.21:0,63,882	0/0:23,0:23:63.15:0,63,811	0/0:23,0:23:60.19:0,60,814	0/0:23,0:23:69.20:0,69,931	0/0:19,0:19:51.11:0,51,674	1/1:2,24:26:57.17:684,57,0	0/0:30,0:30:87.28:0,87,1202	0/0:26,0:26:78.24:0,78,1072	0/0:13,0:13:39.13:0,39,546
chr10	88503542	.	ATTCTTC	A	643.98	PASS	AB=0.895;AC=12;AF=0.273;AN=44;BaseQRankSum=0.821;DP=407;FS=2.193;HRun=0;HaplotypeScore=87.1965;InbreedingCoeff=0.4758;MQ=61.49;MQ0=8;MQRankSum=-2.538;QD=5.24;ReadPosRankSum=-0.125;VQSLOD=1.1382;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:3,0:7:9.58:0,10,68	./.	./.	0/0:17,0:17:5.35:0,5,29	1/1:12,0:20:6.02:75,6,0	1/1:13,0:12:3:29,3,0	./.	0/0:16,0:15:12.04:0,12,315	0/0:26,0:25:27.08:0,27,672	0/0:25,0:25:42.13:0,42,827	1/1:13,5:16:6.02:117,6,0	0/0:5,0:5:15.05:0,15,307	1/1:7,0:7:3.01:59,3,0	./.	0/0:6,0:4:10.28:0,10,193	0/0:28,0:28:15.50:0,15,286	0/1:22,7:30:42.80:126,0,43	0/0:2,0:2:3.01:0,3,79	0/0:11,0:10:14.97:0,15,176	0/0:13,0:21:5.88:0,6,36	1/1:11,9:18:18.06:336,18,0	0/0:5,0:5:3.01:0,3,38	./.	0/1:15,0:15:18.43:43,0,18	0/0:20,0:24:21.66:0,22,155	0/0:2,0:2:6.02:0,6,142	0/0:17,0:18:33.01:0,33,814
chr10	88503627	.	CCT	C	409.85	PASS	AB=0.939;AC=26;AF=0.650;AN=40;BaseQRankSum=0.430;DP=424;FS=4.897;HRun=0;HaplotypeScore=64.6198;InbreedingCoeff=-0.0127;MQ=38.26;MQ0=50;MQRankSum=-0.549;QD=2.03;ReadPosRankSum=2.248;VQSLOD=0.5732;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/1:11,0:10:0:0,0,0	0/1:14,0:11:3.78:20,0,4	1/1:6,0:5:8.38:39,8,0	./.	0/1:7,1:8:17.93:27,0,18	0/1:12,0:15:21.35:68,0,21	1/1:11,1:12:5.68:43,6,0	1/1:10,0:7:4.04:16,4,0	1/1:6,0:9:8.58:43,9,0	1/1:9,0:8:0.47:1,0,0	0/0:6,0:6:5.92:0,6,41	0/1:11,0:13:19.48:19,0,39	1/1:13,4:16:2.71:118,3,0	1/1:12,0:12:8.52:42,9,0	./.	./.	0/0:9,0:9:0:0,0,0	1/1:22,0:18:5.64:27,6,0	./.	1/1:9,0:10:5.68:28,6,0	0/1:8,0:9:4:4,0,14	0/1:12,0:9:8.18:8,0,12	0/1:7,1:8:20.54:21,0,76	0/0:9,0:9:0:0,0,0
chr10	88503660	.	C	CCCT	1642.29	PASS	AB=0.956;AC=25;AF=0.446;AN=56;BaseQRankSum=6.216;DP=293;FS=60.374;HRun=0;HaplotypeScore=64.7089;InbreedingCoeff=-0.2036;MQ=31.31;MQ0=29;MQRankSum=-4.443;QD=7.64;ReadPosRankSum=0.468;VQSLOD=0.2015;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:3.01:0,3,55	1/1:2,0:2:6.02:99,6,0	0/0:11,0:3:6.02:0,6,107	0/0:21,0:8:20.99:0,21,304	0/1:12,0:11:18.88:19,0,46	0/1:14,1:11:5.02:253,0,5	0/1:7,0:6:35.65:129,0,36	0/1:17,0:12:83.43:83,0,289	0/0:10,0:8:12.02:0,12,168	0/1:14,2:16:99:186,0,477	0/1:9,3:11:43.58:44,0,77	1/1:12,2:10:14.81:261,15,0	0/1:5,0:6:36.03:36,0,78	0/1:10,1:10:7.62:114,0,8	1/1:7,0:7:6.02:94,6,0	0/1:11,0:11:92.98:93,0,191	0/0:17,0:16:11.40:0,11,330	0/1:6,0:6:18.37:40,0,18	0/1:4,0:3:21.10:21,0,30	0/0:5,0:5:6.01:0,6,80	1/1:12,1:12:0.49:2,0,0	1/1:9,1:7:9.69:74,10,0	0/0:4,0:2:3.01:0,3,55	0/1:12,0:11:27.55:28,0,63	0/1:16,1:15:77.01:77,0,150	0/1:10,1:6:99:114,0,136	0/0:6,0:5:15.05:0,15,235	0/1:10,0:9:39.46:39,0,66
chr10	88503663	.	T	TCTCCCTTCC	3833.42	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=2.315;DP=276;FS=46.137;HRun=0;HaplotypeScore=76.3584;InbreedingCoeff=0.2011;MQ=30.70;MQ0=22;MQRankSum=-2.645;QD=15.84;ReadPosRankSum=-1.260;VQSLOD=-0.0022;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:3:0,3,25	1/1:3,0:3:6.02:159,6,0	0/0:11,0:3:3.37:0,3,18	0/1:16,0:8:19.53:31,0,20	1/1:13,0:12:6.10:63,6,0	1/1:14,0:11:21.66:376,22,0	1/1:7,0:6:12.01:166,12,0	1/1:15,0:11:10.22:232,10,0	0/0:9,0:7:5.45:0,5,151	0/1:16,0:16:99:452,0,130	0/1:10,0:9:46.98:96,0,47	1/1:12,0:9:20.14:386,20,0	1/1:5,0:6:7.78:98,8,0	1/1:11,0:10:17.87:237,18,0	1/1:1,4:7:6.02:240,6,0	1/1:7,0:10:24.08:513,24,0	0/1:16,0:15:44.27:44,0,186	1/1:5,0:5:12.01:146,12,0	1/1:4,0:3:3.01:63,3,0	1/1:4,0:4:1.24:3,1,0	1/1:13,0:12:3.13:6,3,0	1/1:10,0:7:6.02:119,6,0	0/0:3,0:2:3:0,3,25	1/1:11,0:10:6.20:61,6,0	0/1:17,0:15:54.12:128,0,54	0/1:11,0:6:8.77:158,0,9	0/0:6,0:5:15.03:0,15,246	1/1:10,0:8:3.01:57,3,0
chr10	88505401	.	AT	A	3465.39	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=3.173;DP=550;FS=0.374;HRun=9;HaplotypeScore=65.6592;InbreedingCoeff=0.9607;MQ=76.50;MQ0=0;MQRankSum=-1.201;QD=22.65;ReadPosRankSum=2.969;VQSLOD=4.5182;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:28.79:0,29,522	0/0:5,0:5:6.02:0,6,69	0/0:16,0:16:40.87:0,41,420	0/0:13,0:13:27.06:0,27,293	1/1:2,24:26:69.03:631,69,0	1/1:4,17:22:50.05:445,50,0	1/1:2,18:20:45.02:412,45,0	0/0:7,0:30:61.17:0,61,326	0/0:22,1:23:38.73:0,39,700	0/0:21,0:21:54.14:0,54,610	0/0:16,0:16:45.09:0,45,504	1/1:3,16:19:48.02:439,48,0	0/0:21,0:21:48.13:0,48,546	1/1:2,22:24:63.03:577,63,0	0/0:21,0:21:57.16:0,57,649	0/0:22,0:22:57.14:0,57,645	0/0:20,0:20:45.13:0,45,519	1/1:1,14:15:39.01:357,39,0	0/0:12,0:12:27.07:0,27,305	0/0:21,0:21:57.13:0,57,643	0/0:1,0:12:31.25:0,31,159	1/1:0,27:27:66.02:604,66,0	0/0:11,1:12:5.64:0,6,317	0/0:20,0:20:60.18:0,60,693	0/0:6,0:23:48.75:0,49,275	0/0:5,0:25:59.96:0,60,321	0/0:23,0:23:57.17:0,57,658	0/0:2,0:22:62.83:0,63,358
chr10	88509142	.	A	AG	11981.88	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-18.254;DP=754;FS=3.133;HRun=1;HaplotypeScore=69.4417;InbreedingCoeff=0.9998;MQ=93.84;MQ0=0;MQRankSum=-9.016;QD=39.54;ReadPosRankSum=3.489;VQSLOD=5.6387;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.18:0,63,802	0/0:9,0:9:27.09:0,27,350	0/0:43,0:42:99:0,123,1504	0/0:26,0:26:75.21:0,75,947	1/1:0,18:18:45.04:622,45,0	1/1:0,26:26:72.24:1079,72,0	1/1:0,25:25:63.21:944,63,0	1/1:0,33:33:96.32:1433,96,0	0/0:37,0:37:99:0,108,1380	0/0:36,0:36:99:0,102,1287	0/0:21,0:21:63.19:0,63,792	1/1:2,33:35:81.27:1214,81,0	0/0:37,0:37:99:0,111,1440	1/1:1,31:32:81.27:1214,81,0	0/0:32,0:32:96.30:0,96,1232	0/0:34,0:34:99:0,99,1271	0/0:29,0:29:78.18:0,78,976	1/1:0,18:18:42.14:629,42,0	0/0:17,0:17:48.16:0,48,623	0/0:22,0:22:66.21:0,66,855	1/1:0,34:34:96.33:1437,96,0	1/1:1,21:22:57.11:826,57,0	0/0:20,0:20:60.18:0,60,763	0/0:28,0:28:84.23:0,84,1069	1/1:0,17:17:48.16:718,48,0	1/1:0,31:31:93.30:1371,93,0	0/0:38,0:38:99:0,114,1479	1/1:1,11:12:33.11:494,33,0
chr10	88509452	.	GA	G	6494.85	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=14.984;DP=623;FS=0.647;HRun=8;HaplotypeScore=59.0661;InbreedingCoeff=0.9703;MQ=78.60;MQ0=0;MQRankSum=-0.293;QD=24.42;ReadPosRankSum=1.167;VQSLOD=5.5964;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.27:0,93,1111	0/0:11,0:11:30.09:0,30,362	0/0:16,0:16:40.59:0,41,419	0/0:11,0:11:1.64:0,2,251	1/1:2,27:29:81.13:782,81,0	1/1:0,26:26:72.12:695,72,0	1/1:1,26:27:66.10:637,66,0	1/1:6,26:32:75.03:706,75,0	0/0:24,0:24:69.21:0,69,834	0/0:18,0:18:54.17:0,54,652	0/0:23,0:22:63.18:0,63,751	1/1:3,16:19:45.07:434,45,0	0/0:17,0:17:48.15:0,48,580	1/1:1,17:18:45.07:434,45,0	0/0:27,0:27:78.24:0,78,942	0/0:35,1:36:76.34:0,76,1203	0/0:26,0:26:72.20:0,72,857	1/1:1,15:16:42.07:406,42,0	0/0:27,0:27:66.18:0,66,777	0/0:25,0:25:63.19:0,63,761	1/1:0,18:18:51.08:493,51,0	1/1:3,19:22:51.08:493,51,0	0/0:25,0:25:69.21:0,69,832	0/0:17,0:17:48.12:0,48,558	1/1:2,15:17:45.07:435,45,0	1/1:3,22:25:66.09:632,66,0	0/0:22,0:22:63.14:0,63,732	1/1:3,14:17:36.06:348,36,0
chr10	88511986	.	GCACACACACACA	G	363.13	PASS	AB=0.965;AC=13;AF=0.260;AN=50;BaseQRankSum=2.242;DP=479;FS=3.503;HRun=0;HaplotypeScore=171.3233;InbreedingCoeff=0.3984;MQ=66.03;MQ0=17;MQRankSum=-1.133;QD=2.71;ReadPosRankSum=-0.005;VQSLOD=2.3017;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:24:27.54:28,0,175	0/0:7,0:7:6.02:0,6,152	./.	./.	1/1:14,0:15:3.95:50,4,0	1/1:13,2:16:8.05:139,8,0	./.	0/0:22,0:21:6.02:0,6,93	0/0:15,0:15:21.04:0,21,708	0/0:15,0:15:18.06:0,18,749	0/0:17,0:17:21.07:0,21,1030	1/1:9,2:11:6.02:150,6,0	0/0:12,0:11:17.55:0,18,467	1/1:11,1:12:3.01:100,3,0	0/1:15,0:17:18.39:18,0,39	0/0:13,0:16:5.91:0,6,102	0/0:17,0:17:30.08:0,30,1166	0/1:6,0:5:17.49:17,0,76	0/0:22,0:21:17.97:0,18,399	0/0:11,0:10:15.25:0,15,162	0/0:17,0:16:5.99:0,6,123	1/1:24,4:29:0.47:1,0,0	0/0:13,0:14:8.90:0,9,113	0/0:16,0:16:11.63:0,12,276	0/0:15,0:13:26.09:0,26,668	0/0:18,0:17:45.15:0,45,1304	0/0:16,0:17:9.89:0,10,147	0/0:6,0:6:6.02:0,6,149
chr10	88512029	.	C	CAGAGAGAG	1170.49	PASS	AB=0.979;AC=21;AF=0.375;AN=56;BaseQRankSum=7.724;DP=392;FS=7.100;HRun=0;HaplotypeScore=114.9091;InbreedingCoeff=-0.1407;MQ=40.61;MQ0=27;MQRankSum=-0.632;QD=5.02;ReadPosRankSum=-3.520;VQSLOD=0.6553;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:23:10.25:0,10,104	0/0:4,0:4:12.04:0,12,312	0/0:12,0:4:2.19:0,2,128	0/0:10,0:3:6.02:0,6,138	0/0:10,0:10:0.47:0,0,1	1/1:11,0:9:5.89:61,6,0	1/1:15,0:10:9.12:109,9,0	0/1:19,0:18:99:117,0,469	0/0:23,0:23:48.13:0,48,1272	0/0:16,0:16:42.14:0,42,1055	0/0:15,0:14:30.10:0,30,841	0/1:10,0:9:51.92:63,0,52	0/1:19,0:15:99:149,0,233	1/1:8,0:8:6.01:74,6,0	1/1:13,0:13:1.20:116,1,0	0/1:13,0:9:35.51:132,0,36	0/0:24,0:24:57.65:0,58,1477	0/1:4,0:3:33.39:79,0,33	0/1:12,0:10:35.87:36,0,68	0/1:14,0:12:31.61:32,0,100	0/0:6,0:4:3.01:0,3,46	0/0:13,0:12:0:0,0,0	0/1:11,0:11:34.76:68,0,35	0/1:15,0:13:6.44:6,0,32	0/1:20,0:17:33.73:34,0,371	0/1:27,0:21:99:151,0,813	0/1:10,4:16:87.96:88,0,223	0/1:6,0:5:11.37:11,0,138
chr10	88512035	.	C	CAGAGAGAG	4500.69	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=3.501;DP=504;FS=10.920;HRun=0;HaplotypeScore=152.2795;InbreedingCoeff=0.6187;MQ=39.71;MQ0=29;MQRankSum=-4.086;QD=11.25;ReadPosRankSum=-4.542;VQSLOD=1.5010;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,8:26:8.06:137,8,0	0/0:5,0:5:9.01:0,9,175	0/0:17,0:4:11.83:0,12,175	0/1:18,0:8:13.94:14,0,94	1/1:15,0:14:2.65:68,3,0	1/1:17,0:15:3.46:24,3,0	1/1:16,0:11:12.51:323,13,0	1/1:29,0:26:29.01:608,29,0	0/0:23,0:23:36.59:0,37,908	0/0:19,0:19:30.09:0,30,631	0/0:15,0:14:12.04:0,12,258	1/1:11,0:10:3.01:72,3,0	1/1:24,0:20:30.78:506,31,0	1/1:14,0:14:5.99:121,6,0	1/1:19,0:19:0.47:1,0,0	1/1:19,0:15:15.04:296,15,0	0/0:25,0:25:31.76:0,32,792	1/1:7,0:6:15.05:388,15,0	1/1:19,0:17:28.48:458,28,0	1/1:20,0:18:8.87:168,9,0	1/1:8,0:6:6.01:97,6,0	1/1:19,0:18:2.91:58,3,0	1/1:20,0:19:9.01:159,9,0	1/1:16,0:14:3.01:49,3,0	1/1:20,0:18:3.90:69,4,0	1/1:31,0:23:15.52:395,16,0	1/1:18,0:18:11.92:268,12,0	1/1:11,0:10:15:224,15,0
chr10	88513423	.	T	TA	5255.15	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-13.215;DP=677;FS=1.954;HRun=8;HaplotypeScore=63.3269;InbreedingCoeff=0.9778;MQ=78.51;MQ0=0;MQRankSum=-0.235;QD=28.87;ReadPosRankSum=1.247;VQSLOD=5.1584;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:48:0,48,434	0/0:10,0:10:27.01:0,27,247	0/0:19,0:20:26.59:0,27,228	0/0:14,0:14:21:0,21,189	1/1:4,40:44:92.84:1301,93,0	1/1:2,22:24:63.19:727,63,0	1/1:4,18:22:51.15:589,51,0	0/0:36,0:36:75:0,75,683	0/0:24,0:24:69.01:0,69,620	0/0:33,0:33:87.03:0,87,793	0/0:26,0:26:60:0,60,545	1/1:2,20:22:54.16:623,54,0	0/0:28,0:28:81.03:0,81,737	1/1:2,25:27:69.21:796,69,0	0/0:21,0:21:60.03:0,60,549	0/0:28,0:28:72.03:0,72,659	0/0:9,0:9:23.99:0,24,214	1/1:3,10:13:5.63:319,6,0	0/0:26,0:26:71.66:0,72,648	0/0:39,0:39:99:0,99,906	0/0:13,0:13:35.98:0,36,319	1/1:2,28:30:78.23:900,78,0	0/0:27,0:27:75.03:0,75,681	0/0:14,0:14:42.02:0,42,384	0/0:33,0:33:84.01:0,84,763	0/0:26,0:26:69.04:0,69,632	0/0:33,0:32:96:0,96,862	0/0:15,0:15:39.02:0,39,357
chr10	88516346	.	T	TAC	3809.52	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-11.355;DP=575;FS=2.110;HRun=0;HaplotypeScore=66.3680;InbreedingCoeff=0.9923;MQ=70.13;MQ0=2;MQRankSum=-0.427;QD=30.72;ReadPosRankSum=0.616;VQSLOD=5.0264;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:49.04:0,49,743	0/0:5,0:5:15.05:0,15,183	0/0:22,0:18:21.05:0,21,242	0/0:23,0:20:26.87:0,27,304	1/1:4,13:16:30.10:486,30,0	1/1:5,21:27:17.55:790,18,0	1/1:4,11:15:24.08:389,24,0	0/0:41,0:41:90.26:0,90,1069	0/0:19,0:20:57.01:0,57,674	0/0:23,0:23:51.14:0,51,594	0/0:29,0:28:63.18:0,63,757	1/1:1,9:10:24.08:386,24,0	0/0:25,0:25:60.17:0,60,720	1/1:4,12:16:33.11:528,33,0	0/0:23,0:23:57.13:0,57,668	0/0:9,0:9:24.08:0,24,293	0/0:22,0:22:45.09:0,45,521	1/1:3,23:26:24.70:841,25,0	0/0:13,0:13:26.55:0,27,319	0/0:27,0:28:72.03:0,72,832	0/0:19,0:19:48.15:0,48,586	1/1:1,12:13:24.08:389,24,0	0/0:13,0:13:35.85:0,36,415	0/0:23,0:23:54.15:0,54,645	0/0:17,0:17:36.09:0,36,416	0/0:16,0:16:48.14:0,48,576	0/0:36,0:36:87.27:0,87,1060	0/0:19,0:19:57.18:0,57,696
chr10	88519240	.	T	TAC	1673.57	PASS	AB=0.807;AC=20;AF=0.385;AN=52;BaseQRankSum=-4.873;DP=544;FS=2.639;HRun=0;HaplotypeScore=98.0125;InbreedingCoeff=-0.1126;MQ=67.94;MQ0=10;MQRankSum=0.917;QD=5.13;ReadPosRankSum=-1.816;VQSLOD=2.7810;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,9:33:31.27:78,0,31	0/0:1,0:1:3.01:0,3,33	./.	0/0:35,0:21:1.82:0,2,5	0/1:12,2:14:47.60:111,0,48	1/1:26,0:27:12.76:101,13,0	0/1:22,0:21:45.70:154,0,46	0/0:24,0:24:5.88:0,6,19	0/0:15,0:15:8.86:0,9,79	0/1:12,0:13:15.96:16,0,66	./.	0/1:17,2:18:20.22:121,0,20	0/1:14,11:25:11.81:203,0,12	0/1:6,3:10:24.15:39,0,24	0/1:15,9:28:99:169,0,191	0/1:8,7:18:11.56:224,0,12	0/0:25,0:27:20.14:0,20,248	0/1:23,0:23:32.22:32,0,59	0/0:14,0:14:1.85:0,2,30	1/1:6,4:10:3.01:45,3,0	0/0:20,0:36:50.47:0,50,238	1/1:15,1:16:12.02:155,12,0	0/1:6,3:10:24.72:39,0,25	0/1:27,14:46:99:237,0,100	0/0:11,0:12:14.41:0,14,112	0/0:10,0:12:6.15:0,6,29	1/1:7,2:9:8.99:109,9,0	0/0:4,0:11:14.20:0,14,70
chr10	88519329	.	TG	T	1796.64	PASS	AB=0.940;AC=18;AF=0.321;AN=56;BaseQRankSum=12.095;DP=598;FS=0.000;HRun=2;HaplotypeScore=98.7183;InbreedingCoeff=0.6429;MQ=75.80;MQ0=1;MQRankSum=-1.348;QD=7.07;ReadPosRankSum=-0.858;VQSLOD=0.3293;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:80.97:0,81,1135	0/0:9,0:9:27.09:0,27,399	0/0:20,0:18:7.28:0,7,435	0/0:16,0:15:11.45:0,11,279	1/1:19,0:19:34.11:192,34,0	1/1:24,0:24:63.66:294,64,0	1/1:21,0:20:21.02:164,21,0	0/1:32,0:32:45.58:46,0,89	0/0:22,0:22:64.06:0,64,899	0/0:25,0:25:75.21:0,75,1023	0/0:18,0:18:31.26:0,31,674	1/1:20,0:20:41.07:222,41,0	0/0:23,0:23:63.20:0,63,913	1/1:17,0:17:44.47:221,44,0	0/0:25,0:25:68.23:0,68,967	0/0:16,0:16:45.15:0,45,660	0/0:30,0:30:80.04:0,80,1123	1/1:21,0:21:32.88:181,33,0	0/0:18,0:18:54.12:0,54,742	0/0:16,0:16:45.05:0,45,634	0/1:27,0:27:59.94:60,0,93	1/1:29,0:29:66.66:347,67,0	0/0:16,0:16:48.14:0,48,677	0/0:21,0:21:59.98:0,60,831	0/1:17,3:20:72.89:99,0,73	0/1:21,3:24:99:173,0,111	0/0:22,0:21:66.18:0,66,941	0/0:16,0:16:6.76:0,7,71
chr10	88519330	.	G	GT	3499.81	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.109;DP=602;FS=1.220;HRun=1;HaplotypeScore=94.0886;InbreedingCoeff=0.9334;MQ=75.72;MQ0=1;MQRankSum=-1.726;QD=22.87;ReadPosRankSum=0.926;VQSLOD=3.7292;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:81.23:0,81,1106	0/0:9,0:9:27.09:0,27,378	0/0:20,0:18:41.57:0,42,482	0/0:16,0:15:4.57:0,5,330	1/1:2,16:18:24.33:408,24,0	1/1:1,23:24:68.47:696,68,0	1/1:6,15:20:1.33:306,1,0	0/0:32,0:32:77.29:0,77,362	0/0:22,0:22:66.11:0,66,895	0/0:25,0:25:75.24:0,75,1031	0/0:18,0:18:48.76:0,49,707	1/1:4,16:21:32.22:454,32,0	0/0:23,0:23:63.21:0,63,878	1/1:2,16:18:41.99:430,42,0	0/0:25,0:25:69.23:0,69,951	0/0:16,0:16:45.15:0,45,628	0/0:30,0:30:81.26:0,81,1114	1/1:1,20:21:37.04:504,37,0	0/0:19,0:19:54.16:0,54,734	0/0:16,0:16:45.10:0,45,614	0/0:24,1:25:26.13:0,26,279	1/1:5,24:30:58.32:701,58,0	0/0:16,0:16:48.16:0,48,670	0/0:22,0:22:60.20:0,60,826	0/0:22,0:22:31.85:0,32,226	0/0:23,0:23:43.66:0,44,277	0/0:22,0:21:66.22:0,66,921	0/0:16,0:16:31.63:0,32,172
chr10	88519965	.	GGTGTGTGTATGTGT	G	2440.57	PASS	AB=0.791;AC=17;AF=0.304;AN=56;BaseQRankSum=0.640;DP=809;FS=28.072;HRun=0;HaplotypeScore=312.8924;InbreedingCoeff=0.4292;MQ=59.72;MQ0=32;MQRankSum=-4.652;QD=7.72;ReadPosRankSum=0.196;VQSLOD=1.3047;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:74.20:0,74,3505	0/0:14,0:13:25.87:0,26,1387	0/0:31,0:26:42.80:0,43,787	0/0:41,0:29:59.16:0,59,990	1/1:20,10:25:1.37:14,1,0	1/1:6,16:23:2.81:17,3,0	0/1:23,0:19:7.67:113,0,8	1/1:25,0:22:15.55:406,16,0	0/0:30,0:30:63.22:0,63,2589	0/0:41,0:39:99:0,114,3468	0/0:30,0:30:37.68:0,38,1292	0/1:15,17:26:99:574,0,116	0/0:28,0:28:53.23:0,53,1757	1/1:23,1:23:9.82:73,10,0	0/0:44,0:44:69.55:0,70,2677	0/0:27,0:24:48.83:0,49,2073	0/0:24,0:23:48.88:0,49,2041	0/1:3,7:9:54.46:153,0,54	0/0:28,0:27:64.17:0,64,1505	0/0:18,0:18:39.24:0,39,1115	1/1:26,0:17:17.97:142,18,0	0/1:25,17:41:0.63:1,0,1	0/0:32,0:32:29.26:0,29,986	0/0:34,0:34:60.13:0,60,2023	0/1:38,0:35:0.90:346,0,1	0/1:30,0:28:99:581,0,678	0/0:25,0:25:48.01:0,48,1552	0/1:5,0:9:67.43:192,0,67
chr10	88519972	.	GTA	G	1591.05	PASS	AB=0.980;AC=27;AF=0.482;AN=56;BaseQRankSum=5.987;DP=835;FS=43.922;HRun=0;HaplotypeScore=221.2431;InbreedingCoeff=0.1386;MQ=50.76;MQ0=35;MQRankSum=-2.792;QD=2.94;ReadPosRankSum=2.507;VQSLOD=1.6013;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,1:43:29.07:0,29,1051	0/0:15,1:16:31.92:0,32,501	0/0:26,0:21:51.63:0,52,556	0/0:35,0:23:59.10:0,59,685	1/1:28,0:23:2.82:17,3,0	0/0:25,0:25:2.17:0,2,11	1/1:25,0:21:19.34:140,19,0	1/1:26,0:23:12.38:324,12,0	0/0:33,0:32:27.23:0,27,739	0/0:51,0:48:50.17:0,50,1091	0/0:37,0:36:32.73:0,33,409	1/1:34,0:28:7.33:78,7,0	0/1:32,0:32:85.63:119,0,86	1/1:21,0:20:9.97:74,10,0	0/1:44,0:44:72.39:159,0,72	0/1:29,0:26:99:114,0,114	0/0:24,0:22:45.90:0,46,696	1/1:10,0:9:0.43:43,0,0	0/1:26,1:26:52.14:52,0,239	0/1:19,0:20:43.87:44,0,88	1/1:25,0:16:14.23:111,14,0	0/1:43,1:43:0:0,0,1	0/1:33,1:34:21.49:49,0,21	0/1:29,0:29:73.97:74,0,145	0/1:41,1:40:21.14:21,0,21	0/1:33,0:28:47.34:244,0,47	0/1:26,0:26:60.94:61,0,157	1/1:11,0:10:7.92:46,8,0
chr10	88519974	.	ATG	A	2613.57	PASS	AB=0.898;AC=28;AF=0.500;AN=56;BaseQRankSum=0.426;DP=850;FS=8.315;HRun=0;HaplotypeScore=228.6240;InbreedingCoeff=0.2171;MQ=48.04;MQ0=36;MQRankSum=1.682;QD=4.24;ReadPosRankSum=4.067;VQSLOD=1.6785;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,9:42:60.64:61,0,665	0/0:17,0:16:33.47:0,33,430	0/0:25,0:20:6.02:0,6,74	0/0:34,0:21:9.02:0,9,103	0/1:28,0:23:0:0,0,0	0/0:26,0:26:1.92:0,2,11	1/1:25,0:21:2.01:13,2,0	0/1:26,0:23:1.81:2,0,36	0/1:33,1:33:20.22:20,0,514	0/1:55,1:52:1.85:2,0,545	0/0:38,1:38:2.09:0,2,230	0/1:34,0:28:0.01:53,0,0	1/1:15,15:32:7.58:300,8,0	0/1:20,0:19:0:0,0,0	0/1:20,23:44:6.46:520,0,6	0/1:13,15:28:28.11:355,0,28	0/0:23,0:22:22.52:0,23,465	1/1:10,0:9:4.09:17,4,0	1/1:17,10:27:17.08:276,17,0	1/1:16,4:20:23.35:238,23,0	0/0:24,0:14:5.96:0,6,43	0/1:48,0:46:0:0,0,1	1/1:21,12:35:19.39:219,19,0	1/1:13,15:31:35.86:366,36,0	0/0:44,0:41:17.19:0,17,116	0/1:35,0:30:57.78:58,0,82	0/1:14,9:24:21.93:246,0,22	1/1:12,0:11:3.84:27,4,0
chr10	88519990	.	G	GA	113.81	PASS	AB=0.983;AC=9;AF=0.161;AN=56;BaseQRankSum=7.313;DP=985;FS=49.175;HRun=0;HaplotypeScore=305.3578;InbreedingCoeff=0.0462;MQ=37.12;MQ0=53;MQRankSum=-8.246;QD=0.33;ReadPosRankSum=-2.791;VQSLOD=0.9023;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:74.11:0,74,924	0/0:18,1:18:46.33:0,46,576	0/0:29,0:7:18.06:0,18,239	0/0:35,0:8:24.01:0,24,298	0/1:35,3:32:0:0,0,0	0/1:35,0:35:17.39:17,0,20	0/1:29,0:23:21.89:22,0,98	0/1:35,0:30:4.07:4,0,474	0/0:41,0:40:33.21:0,33,669	0/1:76,0:71:95.44:95,0,1575	0/0:41,1:40:32.26:0,32,429	0/1:36,0:31:6.54:7,0,96	0/0:34,0:35:29.42:0,29,350	0/0:21,0:20:1.24:0,1,39	0/0:52,0:52:69.89:0,70,545	0/0:37,0:34:34.98:0,35,393	0/0:25,1:25:36.65:0,37,665	0/0:14,0:13:19.82:0,20,211	0/0:24,0:22:49.45:0,49,484	0/0:27,1:28:26.45:0,26,207	0/0:29,0:18:17.97:0,18,222	1/1:48,2:49:3.76:9,4,0	0/0:44,1:46:28.40:0,28,230	0/0:29,0:29:52.96:0,53,430	0/0:43,1:44:0.79:0,1,124	0/1:43,0:38:78.75:79,0,603	0/0:28,0:28:17.04:0,17,335	0/0:15,0:15:0.48:0,0,161
chr10	88519998	.	G	GTA	90.01	PASS	AB=0.985;AC=9;AF=0.161;AN=56;BaseQRankSum=10.220;DP=988;FS=75.236;HRun=0;HaplotypeScore=308.5049;InbreedingCoeff=0.0734;MQ=34.84;MQ0=51;MQRankSum=-8.850;QD=0.32;ReadPosRankSum=-0.399;VQSLOD=-0.5994;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:67.79:0,68,849	0/0:18,0:17:28.66:0,29,465	0/0:36,0:4:11.96:0,12,95	0/0:43,0:4:5.07:0,5,55	0/1:32,0:30:0:0,0,0	0/1:36,0:35:1.60:2,0,19	0/0:26,0:22:6.37:0,6,65	0/0:46,0:38:62.72:0,63,606	0/0:44,0:42:23.98:0,24,583	0/0:77,0:73:48.52:0,49,1175	0/0:44,0:42:21.19:0,21,304	0/1:32,0:30:20.93:21,0,55	0/0:35,0:35:39.12:0,39,292	0/0:20,0:20:2.99:0,3,25	0/0:49,0:51:62.13:0,62,478	0/0:36,0:33:45.60:0,46,374	0/1:26,0:24:0.59:1,0,543	0/0:11,0:10:13.70:0,14,82	0/0:29,0:23:46.75:0,47,329	0/0:30,0:29:33.20:0,33,226	0/0:28,0:20:12.44:0,12,80	1/1:49,2:50:0.92:9,1,0	0/0:45,0:44:34.20:0,34,258	0/0:23,0:23:38.66:0,39,274	0/1:46,0:44:3.97:4,0,79	0/1:38,1:35:97.10:97,0,329	0/0:28,0:29:20.35:0,20,231	0/1:15,1:16:40.70:65,0,41
chr10	88520015	.	ATG	A	168.87	PASS	AB=0.873;AC=4;AF=0.071;AN=56;BaseQRankSum=5.774;DP=964;FS=19.456;HRun=0;HaplotypeScore=292.9779;InbreedingCoeff=0.0569;MQ=32.95;MQ0=55;MQRankSum=-3.993;QD=1.52;ReadPosRankSum=2.793;VQSLOD=1.1101;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:42.14:0,42,668	0/0:17,1:17:36.55:0,37,567	0/0:49,0:3:9.03:0,9,160	0/0:46,0:2:6.02:0,6,86	0/1:26,4:29:0:0,0,0	0/0:24,0:23:17.01:0,17,191	0/1:25,1:22:5.69:6,0,146	0/0:53,0:45:99:0,118,1656	0/0:42,0:40:68.67:0,69,1042	0/0:79,1:75:71.04:0,71,2637	0/0:40,0:38:20.49:0,20,356	0/0:27,0:26:29.86:0,30,321	0/0:33,0:33:58.98:0,59,1019	0/0:18,1:19:12:0,12,163	0/0:48,0:48:69.52:0,70,1109	0/0:31,0:30:52.94:0,53,855	0/0:21,0:19:45.08:0,45,688	0/0:9,0:7:15:0,15,181	0/0:38,0:32:81.13:0,81,1165	0/0:31,1:30:27.05:0,27,440	0/0:28,0:18:9.03:0,9,162	0/0:46,4:49:3.79:0,4,20	0/0:39,0:38:24.55:0,25,434	0/0:21,1:22:33.11:0,33,576	0/0:45,0:44:10.56:0,11,84	0/1:34,5:35:99:117,0,976	0/0:28,0:28:38.51:0,39,914	0/1:11,5:15:99:139,0,139
chr10	88520032	.	G	GTA	274.05	PASS	AB=0.933;AC=4;AF=0.071;AN=56;BaseQRankSum=5.257;DP=876;FS=12.799;HRun=0;HaplotypeScore=277.7270;InbreedingCoeff=0.1202;MQ=32.42;MQ0=37;MQRankSum=-4.892;QD=2.14;ReadPosRankSum=1.714;VQSLOD=0.6898;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:25.85:0,26,287	0/0:17,0:16:9.60:0,10,349	0/0:35,0:3:8.99:0,9,106	0/0:38,0:2:3.01:0,3,46	1/1:27,1:27:0.89:2,1,0	0/0:24,0:23:22.09:0,22,264	0/0:24,1:21:13.11:0,13,238	0/0:45,0:39:98.75:0,99,1231	0/0:39,0:38:47.80:0,48,580	0/1:65,8:70:99:348,0,1891	0/0:33,1:33:13.74:0,14,191	0/0:21,0:20:29.37:0,29,220	0/0:29,1:30:47.23:0,47,540	0/0:17,1:18:17.35:0,17,173	0/0:45,0:45:57.25:0,57,608	0/0:28,0:27:49.84:0,50,618	0/0:20,0:18:6.64:0,7,453	0/0:6,0:4:12.02:0,12,167	0/0:34,0:31:74.78:0,75,1080	0/0:33,2:32:25.18:0,25,257	0/0:28,0:18:11.95:0,12,150	0/0:47,0:46:5.47:0,5,44	0/0:28,4:32:17.45:0,17,245	0/0:19,0:19:23.93:0,24,327	0/0:49,0:46:1.37:0,1,29	0/0:38,0:35:50.88:0,51,1072	0/1:26,1:27:1.54:2,0,481	0/0:14,0:13:25.92:0,26,270
chr10	88520036	.	G	GGT	368.86	PASS	AB=0.960;AC=29;AF=0.518;AN=56;BaseQRankSum=3.415;DP=812;FS=0.000;HRun=0;HaplotypeScore=261.1124;InbreedingCoeff=0.0098;MQ=32.08;MQ0=36;MQRankSum=-1.681;QD=0.59;ReadPosRankSum=0.666;VQSLOD=2.3780;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:2.75:0,3,23	0/0:14,0:16:4.61:0,5,124	0/1:25,0:3:0:0,0,0	0/0:29,0:2:2.98:0,3,21	1/1:22,7:28:0.89:3,1,0	0/1:21,1:21:0.50:2,0,1	0/1:25,0:21:23.03:23,0,42	0/1:37,0:32:95.57:96,0,124	0/0:36,0:36:5.12:0,5,64	0/1:66,0:67:99:109,0,372	1/1:34,0:35:2.15:19,2,0	0/1:17,2:18:0:0,0,0	1/1:26,0:26:0.79:14,1,0	0/1:15,2:17:0:0,0,0	1/1:40,0:40:0.43:3,0,0	0/0:27,0:26:5.88:0,6,27	0/0:15,0:17:8.88:0,9,100	0/1:5,0:3:6.90:7,0,30	0/0:29,0:28:4.77:0,5,100	1/1:28,0:31:2.64:15,3,0	0/1:22,0:14:3.05:10,0,3	0/1:40,4:44:0.18:0,0,2	1/1:25,0:31:1.25:5,1,0	1/1:17,0:19:5.70:31,6,0	1/1:37,4:46:0.65:5,1,0	0/1:31,3:32:99:110,0,196	0/1:21,0:23:19.21:19,0,51	0/1:14,0:13:25.77:27,0,26
chr10	88520041	.	G	GTA	76.92	PASS	AB=0.952;AC=10;AF=0.179;AN=56;BaseQRankSum=3.238;DP=724;FS=1.594;HRun=0;HaplotypeScore=239.8280;InbreedingCoeff=-0.0145;MQ=31.32;MQ0=32;MQRankSum=-3.033;QD=0.30;ReadPosRankSum=-1.388;VQSLOD=2.3972;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:21:0.54:1,0,54	0/0:16,0:16:25.75:0,26,270	0/0:17,0:1:3:0,3,26	0/0:18,0:2:3.01:0,3,45	1/1:29,0:28:0.89:2,1,0	0/0:19,2:20:15.43:0,15,87	0/1:22,1:20:14.02:14,0,131	0/1:27,2:23:69.59:70,0,301	0/0:32,0:31:17.69:0,18,151	0/1:60,3:60:39.17:39,0,936	0/0:30,1:30:9.98:0,10,62	0/0:17,0:16:6.25:0,6,33	0/0:26,0:26:20.67:0,21,122	0/0:16,1:17:5.92:0,6,41	0/0:35,0:35:16.97:0,17,102	0/0:25,0:24:30.70:0,31,215	0/0:19,0:17:28.85:0,29,250	0/0:5,0:3:6.42:0,6,64	0/0:23,0:21:39.20:0,39,308	0/0:30,1:28:8.11:0,8,52	0/0:22,0:13:7.94:0,8,41	0/0:42,3:44:3.88:0,4,17	0/0:30,0:30:3.13:0,3,64	0/0:14,0:14:7.42:0,7,37	1/1:45,1:44:1.37:5,1,0	0/1:30,2:29:22.69:23,0,432	0/0:23,0:23:21.18:0,21,176	0/1:11,1:11:40.94:41,0,89
chr10	88528414	.	A	AACTC	18086.50	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=2.952;DP=741;FS=10.910;HRun=0;HaplotypeScore=145.4357;InbreedingCoeff=0.9993;MQ=83.42;MQ0=1;MQRankSum=-14.744;QD=54.31;ReadPosRankSum=-2.802;VQSLOD=4.6631;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,111,1928	0/0:15,0:15:45.13:0,45,776	0/0:30,0:30:65:0,65,893	0/0:23,0:23:38.79:0,39,525	1/1:6,24:30:54.17:1325,54,0	1/1:1,20:19:54.19:1431,54,0	1/1:6,25:32:57.20:1446,57,0	1/1:17,28:44:99:2354,101,0	0/0:31,0:31:90.29:0,90,1634	0/0:34,0:34:90.24:0,90,1574	0/0:12,0:12:36.12:0,36,672	1/1:5,37:42:99:2619,99,0	0/0:24,0:24:72.23:0,72,1312	1/1:6,23:30:69.24:1803,69,0	0/0:27,0:27:78.18:0,78,1346	0/0:28,0:28:78.27:0,78,1455	0/0:26,0:26:72.25:0,72,1335	1/1:5,24:31:62.57:1709,63,0	0/0:25,0:25:69.23:0,69,1237	0/0:20,0:20:54.13:0,54,938	1/1:8,21:30:51.18:1312,51,0	1/1:4,18:22:45.15:1187,45,0	0/0:12,0:12:29.89:0,30,475	0/0:28,0:28:84.19:0,84,1424	1/1:2,17:19:39.13:1038,39,0	1/1:3,17:21:60.07:1302,60,0	0/0:29,0:29:84.29:0,84,1560	1/1:0,9:9:21.07:559,21,0
chr10	88528571	.	C	CA	5384.58	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-9.040;DP=734;FS=0.345;HRun=5;HaplotypeScore=72.2091;InbreedingCoeff=0.9997;MQ=82.20;MQ0=0;MQRankSum=-2.260;QD=33.65;ReadPosRankSum=1.576;VQSLOD=5.2853;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,111,1181	0/0:12,0:12:30.05:0,30,313	0/0:16,0:16:38.98:0,39,393	0/0:24,0:25:54.47:0,54,533	1/1:1,28:29:75.20:966,75,0	1/1:1,20:21:54.18:710,54,0	1/1:2,23:25:54.18:710,54,0	0/0:28,0:28:81.16:0,81,858	0/0:26,0:26:78.18:0,78,830	0/0:33,0:33:96.23:0,96,1024	0/0:30,0:30:75.19:0,75,806	1/1:1,25:26:72.23:945,72,0	0/0:27,0:27:75.17:0,75,798	1/1:2,19:21:48.16:631,48,0	0/0:31,0:31:84.19:0,84,895	0/0:30,0:30:84.19:0,84,894	0/0:25,0:25:69.17:0,69,742	1/1:1,19:20:57.19:750,57,0	0/0:30,0:30:87.19:0,87,915	0/0:32,0:32:84.19:0,84,894	0/0:50,0:50:99:0,138,1483	1/1:1,17:18:51.17:671,51,0	0/0:30,0:30:90.23:0,90,967	0/0:32,0:32:93.21:0,93,990	0/0:22,0:22:60.15:0,60,645	0/0:17,0:17:45.11:0,45,483	0/0:27,0:27:78.17:0,78,828	0/0:9,0:9:27.07:0,27,290
chr10	88528820	.	T	TGTAAGAAACTTTCAA	37601.02	PASS	AB=0.686;AC=23;AF=0.411;AN=56;BaseQRankSum=-2.200;DP=636;FS=2.683;HRun=0;HaplotypeScore=230.2325;InbreedingCoeff=0.9174;MQ=86.60;MQ0=1;MQRankSum=-18.110;QD=159.33;ReadPosRankSum=-1.386;VQSLOD=4.8572;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,5808	0/0:12,0:12:36.12:0,36,1467	0/0:27,0:27:72.23:0,72,2543	0/0:27,0:27:69.21:0,69,2547	1/1:8,13:23:60.13:3207,60,0	1/1:10,10:22:57.20:3727,57,0	1/1:14,11:30:69.24:4793,69,0	1/1:21,2:28:75.72:4019,76,0	0/0:22,0:22:66.17:0,66,2421	0/0:24,0:24:69.23:0,69,2783	0/0:23,0:23:63.21:0,63,2683	1/1:12,7:21:57.20:3812,57,0	0/0:20,0:20:57.18:0,57,2351	1/1:7,10:18:51.18:3360,51,0	0/0:35,0:35:99:0,105,4303	0/0:24,0:24:66.22:0,66,2607	0/0:26,0:26:72.25:0,72,2982	1/1:8,11:20:51.18:3586,51,0	0/0:18,0:18:51.18:0,51,2133	0/0:22,0:22:66.23:0,66,2659	1/1:3,5:10:24.08:1528,24,0	1/1:11,8:21:54.14:3425,54,0	0/0:21,0:21:54.17:0,54,2192	0/0:32,0:32:96.27:0,96,3953	1/1:7,3:16:27.09:1529,27,0	0/1:13,10:23:52.33:3940,0,52	0/0:19,0:19:57.20:0,57,2498	1/1:1,2:3:9.03:674,9,0
chr10	88530286	.	GATATATATAT	G	1065.55	PASS	AC=16;AF=0.421;AN=38;BaseQRankSum=1.695;DP=226;FS=6.168;HRun=0;HaplotypeScore=92.4842;InbreedingCoeff=0.5373;MQ=76.86;MQ0=1;MQRankSum=-2.436;QD=11.71;ReadPosRankSum=1.954;VQSLOD=0.7307;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,5:11:2.92:17,3,0	./.	1/1:10,0:8:2.98:22,3,0	0/0:5,0:5:0:0,0,0	./.	1/1:10,1:16:4.91:136,5,0	./.	0/0:21,0:20:27.09:0,27,532	0/0:3,0:4:3.01:0,3,91	0/0:6,0:6:3.01:0,3,152	0/0:5,0:5:12.04:0,12,525	./.	1/1:7,5:13:3.01:60,3,0	1/1:3,1:6:3.01:66,3,0	0/0:5,5:10:0:0,0,0	./.	0/0:15,0:17:35.33:0,35,1505	1/1:1,2:8:14.97:198,15,0	1/1:9,1:11:18.05:390,18,0	0/0:6,6:12:0:0,0,0	./.	./.	./.	0/0:2,2:4:0:0,0,0	0/0:7,0:8:3.01:0,3,102	./.	1/1:7,3:13:15.02:302,15,0	0/0:5,0:5:3.01:0,3,142
chr10	88531047	.	CT	C	1936.89	PASS	AB=0.954;AC=28;AF=0.500;AN=56;BaseQRankSum=0.914;DP=547;FS=3.300;HRun=13;HaplotypeScore=93.7731;InbreedingCoeff=0.1974;MQ=67.61;MQ0=5;MQRankSum=1.099;QD=5.07;ReadPosRankSum=4.034;VQSLOD=2.5090;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:28:9.22:153,0,9	0/0:6,0:6:15.02:0,15,141	0/0:25,1:14:18.48:0,18,120	0/1:26,1:12:17.52:18,0,20	1/1:4,13:18:23.67:238,24,0	1/1:11,13:24:7.86:265,8,0	1/1:7,11:19:31.85:224,32,0	0/0:28,0:27:16.58:0,17,106	0/0:10,1:11:2.14:0,2,167	0/1:31,3:34:3.29:3,0,593	0/0:18,0:19:42.51:0,43,395	1/1:9,9:18:24.67:171,25,0	0/1:15,0:15:31.72:32,0,57	0/1:7,7:15:0.40:150,0,0	1/1:15,0:15:5.63:27,6,0	0/1:14,0:14:18.25:22,0,18	0/0:31,0:31:77.74:0,78,691	1/1:6,16:23:14.97:260,15,0	0/1:22,0:20:48.93:49,0,56	0/1:21,0:22:35.71:71,0,36	0/0:5,0:5:0:0,0,0	1/1:7,9:15:3.54:184,4,0	0/1:17,0:17:1.92:98,0,2	1/1:21,0:21:1.47:117,1,0	1/1:14,0:13:0.46:2,0,0	0/0:24,0:24:8.91:0,9,31	0/1:17,0:17:18.88:22,0,19	0/0:14,0:11:5.21:0,5,14
chr10	88531059	.	TTG	T	2761.93	PASS	AB=0.985;AC=30;AF=0.536;AN=56;BaseQRankSum=4.852;DP=574;FS=3.863;HRun=0;HaplotypeScore=102.6428;InbreedingCoeff=0.6947;MQ=64.05;MQ0=10;MQRankSum=-6.021;QD=7.42;ReadPosRankSum=-4.156;VQSLOD=1.9904;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,2:30:48.22:409,48,0	0/0:5,0:5:15.04:0,15,211	0/1:50,0:18:21.82:22,0,94	0/1:40,0:15:38.58:39,0,53	0/0:20,0:20:25.97:0,26,237	0/0:18,0:18:20.46:0,20,200	0/0:15,0:15:25.37:0,25,151	1/1:36,0:35:51.05:414,51,0	0/0:11,0:11:28.75:0,29,358	0/0:35,0:35:90.92:0,91,1162	0/0:19,0:19:47.19:0,47,643	0/1:15,1:16:9.45:9,0,88	0/1:10,0:10:1.45:60,0,1	0/0:13,0:13:3.38:0,3,113	1/1:13,0:13:5.81:32,6,0	1/1:14,0:14:15.16:129,15,0	0/0:29,0:29:69.15:0,69,869	0/0:23,0:23:40.92:0,41,303	1/1:21,1:20:42.59:299,43,0	1/1:22,0:22:39.64:248,40,0	1/1:4,0:4:11.89:83,12,0	0/0:14,0:13:37.54:0,38,237	1/1:18,1:19:32.47:245,32,0	1/1:23,0:22:16.01:173,16,0	1/1:16,0:15:35.53:235,36,0	1/1:21,0:21:29.15:250,29,0	1/1:17,0:17:10.33:144,10,0	1/1:16,0:13:27.43:182,27,0
chr10	88531060	.	TG	T	5033	PASS	AB=0.950;AC=36;AF=0.643;AN=56;BaseQRankSum=3.933;DP=565;FS=19.756;HRun=1;HaplotypeScore=86.2649;InbreedingCoeff=0.3469;MQ=64.21;MQ0=10;MQRankSum=-7.114;QD=11.18;ReadPosRankSum=-1.949;VQSLOD=1.4155;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,11:30:69.75:779,70,0	0/0:5,0:5:15.03:0,15,166	0/1:49,0:18:37.60:38,0,62	0/1:36,4:15:29.97:36,0,30	0/0:19,0:19:0.16:0,0,75	0/1:15,1:16:32.51:44,0,33	0/1:14,1:15:14.29:14,0,36	1/1:34,0:33:67.63:512,68,0	0/0:11,0:11:25.77:0,26,253	0/0:33,0:33:71.03:0,71,834	0/0:18,0:18:47.05:0,47,490	0/1:14,3:17:30.65:85,0,31	1/1:7,3:10:14.92:165,15,0	0/1:13,0:13:26.92:36,0,27	1/1:0,13:13:6.02:82,6,0	1/1:0,13:13:17.91:162,18,0	0/0:29,0:29:59.83:0,60,631	0/1:22,1:23:28.63:29,0,105	1/1:16,6:20:51.35:461,51,0	1/1:16,6:22:56.34:536,56,0	1/1:4,0:4:11.89:83,12,0	0/1:14,0:13:2.45:2,0,73	1/1:13,6:19:43.18:472,43,0	1/1:18,5:22:36.04:455,36,0	1/1:15,1:15:39.46:274,39,0	1/1:0,0:21:42.83:293,43,0	1/1:17,0:17:24.63:226,25,0	1/1:14,2:13:32.78:248,33,0
chr10	88531255	.	A	AT	2562.13	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-0.137;DP=611;FS=6.405;HRun=8;HaplotypeScore=60.3770;InbreedingCoeff=0.9701;MQ=82.56;MQ0=0;MQRankSum=-0.658;QD=25.12;ReadPosRankSum=-1.796;VQSLOD=3.7948;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,126,1149	0/0:7,0:7:18.01:0,18,165	0/0:22,0:22:24.70:0,25,267	0/0:14,0:14:16.28:0,16,209	0/0:23,0:23:60:0,60,539	0/0:26,0:26:72.02:0,72,656	0/0:19,0:19:42:0,42,380	1/1:11,24:35:69.18:773,69,0	0/0:13,0:13:36.02:0,36,329	0/0:17,0:18:47.04:0,47,414	0/0:15,0:15:39.01:0,39,357	0/0:29,0:29:69.02:0,69,631	0/0:18,0:18:48.02:0,48,439	0/0:20,0:19:54.03:0,54,494	0/0:19,0:19:54.02:0,54,490	0/0:16,0:16:45.02:0,45,408	0/0:43,0:43:99:0,117,1052	0/0:36,0:36:99:0,99,905	0/0:18,0:17:39.02:0,39,357	0/0:29,0:29:75.02:0,75,681	1/1:1,19:20:54.16:623,54,0	0/0:16,0:16:45.02:0,45,412	0/0:19,0:19:53.98:0,54,486	0/0:24,0:24:66.01:0,66,598	1/1:4,16:20:48.14:554,48,0	1/1:2,22:24:41.70:712,42,0	0/0:16,0:16:45.02:0,45,412	1/1:1,2:3:6.02:69,6,0
chr10	88531448	.	T	TTTTG	4617.47	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-10.042;DP=657;FS=2.875;HRun=0;HaplotypeScore=101.8491;InbreedingCoeff=0.9660;MQ=73.68;MQ0=1;MQRankSum=-2.837;QD=43.15;ReadPosRankSum=-1.715;VQSLOD=4.7035;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:40:87.29:0,87,1410	0/0:10,0:10:12.04:0,12,198	0/0:22,0:22:30.10:0,30,488	0/0:24,0:23:35.82:0,36,605	0/0:27,0:27:57.15:0,57,911	0/0:27,0:27:57.19:0,57,941	0/0:28,0:28:66.18:0,66,1042	1/1:18,15:34:66.22:1482,66,0	0/0:19,0:19:45.15:0,45,743	0/0:18,0:18:42.14:0,42,693	0/0:13,0:13:24.03:0,24,371	0/0:24,0:24:57.19:0,57,941	0/0:35,0:35:87.30:0,87,1436	0/0:28,0:28:63.21:0,63,1028	0/0:19,0:19:51.17:0,51,833	0/0:19,0:19:45.15:0,45,743	0/0:28,0:28:24.06:0,24,1091	0/0:17,0:17:45.15:0,45,724	0/0:19,0:19:39.13:0,39,644	0/0:22,0:22:48.16:0,48,792	1/1:7,22:30:60.21:1471,60,0	0/0:28,0:28:72.25:0,72,1178	0/0:17,0:17:36.11:0,36,570	0/0:23,0:25:66.21:0,66,1038	0/0:16,0:16:42.14:0,42,693	1/1:7,19:27:7.64:1223,8,0	0/0:25,0:25:60.20:0,60,981	1/1:9,6:15:18.06:441,18,0
chr10	88532021	.	G	GT	14695.87	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-8.396;DP=774;FS=1.098;HRun=9;HaplotypeScore=91.2863;InbreedingCoeff=0.9924;MQ=69.84;MQ0=2;MQRankSum=-3.273;QD=24.41;ReadPosRankSum=2.021;VQSLOD=5.2701;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:32:10.89:559,11,0	0/0:12,0:12:32.99:0,33,286	0/0:29,0:29:59.15:0,59,487	0/0:20,0:16:33.37:0,33,273	1/1:2,23:25:68.18:715,68,0	1/1:1,31:32:93.25:1024,93,0	1/1:4,20:25:40.26:670,40,0	1/1:15,28:43:94.48:1019,94,0	0/0:28,0:28:65.98:0,66,572	0/0:28,0:28:71.97:0,72,621	0/0:23,0:24:48.61:0,49,503	1/1:6,28:34:32.41:811,32,0	1/1:7,27:34:44.27:675,44,0	1/1:2,17:19:48.12:523,48,0	1/1:5,26:33:74.87:792,75,0	1/1:0,25:25:69.19:763,69,0	0/0:30,0:30:83.97:0,84,726	1/1:3,19:22:45.12:498,45,0	1/1:11,19:31:33.93:576,34,0	1/1:0,33:33:87.06:898,87,0	1/1:9,11:20:36.08:388,36,0	1/1:1,26:27:75.16:812,75,0	1/1:4,31:35:90.23:987,90,0	1/1:6,20:26:39.98:644,40,0	1/1:5,0:24:63.32:327,63,0	1/1:8,22:30:52.11:789,52,0	1/1:7,33:41:84.03:928,84,0	1/1:1,9:10:27.07:299,27,0
chr10	88532035	.	C	CT	2406.51	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=0.900;DP=789;FS=1.413;HRun=8;HaplotypeScore=131.7976;InbreedingCoeff=0.9900;MQ=66.71;MQ0=3;MQRankSum=-8.445;QD=20.39;ReadPosRankSum=-1.481;VQSLOD=1.8310;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:72.01:0,72,651	0/0:14,0:14:42.02:0,42,384	0/0:32,0:31:59.48:0,59,604	0/0:17,0:12:20.99:0,21,183	0/0:29,0:29:69.02:0,69,629	0/0:35,0:35:95.97:0,96,864	0/0:30,0:30:84.04:0,84,767	1/1:18,19:36:38.70:679,39,0	0/0:33,0:33:77.99:0,78,705	0/0:28,0:28:69.03:0,69,629	0/0:26,0:26:72.01:0,72,650	0/0:38,0:38:81.59:0,82,711	0/0:28,0:28:62.93:0,63,576	0/0:22,0:22:51:0,51,462	0/0:34,0:34:78.02:0,78,713	0/0:26,0:26:56.99:0,57,516	0/0:28,1:29:49.42:0,49,702	0/0:20,0:20:41.99:0,42,384	0/0:28,0:28:53.69:0,54,602	0/0:32,0:32:71.80:0,72,653	1/1:4,12:16:30.09:346,30,0	0/0:34,0:34:72:0,72,658	0/0:35,0:35:93.02:0,93,846	0/0:30,0:30:71.88:0,72,647	1/1:4,18:22:57.17:657,57,0	1/1:10,19:29:11.33:620,11,0	0/0:38,0:37:80.93:0,81,736	1/1:6,8:14:24.07:277,24,0
chr10	88536944	.	C	CT	23055.15	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-14.221;DP=726;FS=4.427;HRun=1;HaplotypeScore=61.3713;InbreedingCoeff=0.9996;MQ=86.98;MQ0=0;MQRankSum=-4.559;QD=41.32;ReadPosRankSum=3.215;VQSLOD=5.4613;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:39:99:1611,108,0	0/0:14,0:14:42.14:0,42,544	0/0:21,0:21:54.17:0,54,691	0/0:29,0:29:72.51:0,73,974	1/1:0,36:36:99:1618,108,0	1/1:0,28:28:81.27:1214,81,0	1/1:0,18:18:54.18:809,54,0	1/1:1,37:38:99:1555,108,0	0/0:20,0:20:60.19:0,60,778	0/0:32,0:31:93.30:0,93,1196	0/0:16,0:16:42.14:0,42,543	1/1:0,27:27:69.23:1034,69,0	1/1:0,33:33:96.33:1439,96,0	1/1:0,26:26:75.25:1124,75,0	1/1:0,20:20:60.20:899,60,0	1/1:1,25:26:72.24:1079,72,0	0/0:36,0:36:99:0,102,1324	1/1:1,29:30:81.25:1191,81,0	1/1:0,17:17:51.17:760,51,0	1/1:1,42:43:99:1774,120,0	1/1:0,26:26:75.25:1124,75,0	1/1:0,19:19:51.17:764,51,0	1/1:0,14:14:42.14:630,42,0	1/1:1,20:21:57.19:854,57,0	1/1:0,22:22:66.22:989,66,0	1/1:1,20:21:24.19:791,24,0	1/1:1,32:32:78:1169,78,0	1/1:2,18:21:42.14:623,42,0
chr10	88537390	.	G	GT	6478.73	PASS	AB=0.556;AC=27;AF=0.482;AN=56;BaseQRankSum=15.877;DP=616;FS=0.000;HRun=3;HaplotypeScore=89.3003;InbreedingCoeff=0.9536;MQ=84.82;MQ0=0;MQRankSum=-0.409;QD=20.57;ReadPosRankSum=0.117;VQSLOD=4.2055;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:36:60.67:683,61,0	0/0:4,0:4:12.04:0,12,144	0/0:28,0:28:63.13:0,63,694	0/0:17,0:16:28.30:0,28,322	0/0:25,0:25:66.19:0,66,773	0/0:24,0:24:72.19:0,72,837	0/0:18,0:18:54.16:0,54,644	1/1:6,13:20:44.86:438,45,0	0/0:22,0:22:63.19:0,63,755	0/0:27,0:27:81.24:0,81,961	0/0:22,0:22:66.17:0,66,766	0/0:22,0:22:63.19:0,63,756	1/1:3,14:17:33.09:374,33,0	0/0:22,0:22:63.19:0,63,756	1/1:2,19:21:42.12:472,42,0	1/1:1,20:21:31.13:462,31,0	0/0:21,0:21:63.17:0,63,740	0/0:32,0:32:90.23:0,90,1065	1/1:4,18:24:54.59:550,55,0	1/1:7,21:29:57.76:595,58,0	1/1:2,18:21:52.96:560,53,0	0/0:17,0:17:48.15:0,48,576	0/1:4,15:20:0.94:222,0,1	1/1:0,8:8:21.06:238,21,0	1/1:8,14:22:37.10:504,37,0	1/1:11,18:29:15.90:432,16,0	1/1:5,26:31:44.54:606,45,0	1/1:1,14:15:30.09:342,30,0
chr10	88537910	.	AT	A	7252.70	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=1.843;DP=736;FS=0.298;HRun=11;HaplotypeScore=105.7508;InbreedingCoeff=0.9639;MQ=71.40;MQ0=0;MQRankSum=-0.934;QD=18.89;ReadPosRankSum=3.579;VQSLOD=4.8408;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,34:39:57.89:682,58,0	0/0:10,0:10:30.08:0,30,320	0/0:9,0:7:8.96:0,9,82	0/0:16,0:17:29.79:0,30,261	0/0:7,0:38:88.81:0,89,466	0/0:4,0:24:54.04:0,54,271	0/0:2,0:25:57.73:0,58,305	1/1:5,26:31:45.87:581,46,0	0/0:26,0:26:75.16:0,75,779	0/0:37,0:37:74.44:0,74,980	0/0:24,0:24:63.08:0,63,646	0/0:8,0:37:74.46:0,74,433	1/1:3,26:30:73.92:597,74,0	0/0:1,0:31:82.48:0,82,414	1/1:6,24:30:1.94:429,2,0	1/1:5,32:38:42.99:647,43,0	0/0:21,0:22:57.01:0,57,590	0/0:7,0:20:46.05:0,46,274	1/1:2,28:29:77.87:637,78,0	1/1:3,24:27:71.91:591,72,0	1/1:0,21:21:62.93:517,63,0	0/0:7,0:32:66.24:0,66,378	1/1:7,21:29:58.94:474,59,0	1/1:3,15:19:46.97:375,47,0	1/1:2,17:19:50.92:419,51,0	1/1:3,18:21:53.93:443,54,0	1/1:8,28:37:48.35:590,48,0	1/1:0,13:13:32.96:271,33,0
chr10	88538240	.	GA	G	509.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.333;DP=622;FS=2.860;HRun=9;HaplotypeScore=55.7035;InbreedingCoeff=0.9837;MQ=73.16;MQ0=0;MQRankSum=-0.668;QD=20.37;ReadPosRankSum=3.055;VQSLOD=4.3663;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:66.04:604,66,0	0/0:11,0:11:33.10:0,33,381	0/0:15,0:15:33.08:0,33,352	0/0:6,0:6:15.04:0,15,170	0/0:35,0:35:99:0,99,1123	0/0:27,0:27:78.22:0,78,891	0/0:21,0:21:60.14:0,60,678	0/0:29,0:29:66.19:0,66,754	0/0:17,0:17:45.12:0,45,511	0/0:20,0:20:45.13:0,45,520	0/0:32,0:32:90.27:0,90,1039	0/0:20,0:20:60.18:0,60,692	0/0:15,0:15:39.12:0,39,450	0/0:19,0:19:50.18:0,50,558	0/0:19,0:19:45.13:0,45,519	0/0:31,0:31:81.24:0,81,935	0/0:17,0:17:51.15:0,51,589	0/0:15,0:15:39.10:0,39,438	0/0:22,0:22:63.19:0,63,727	0/0:29,0:29:78.23:0,78,895	0/0:15,0:15:39.10:0,39,441	0/0:27,0:27:69.21:0,69,796	0/0:31,0:31:84.23:0,84,959	0/0:15,0:15:42.11:0,42,474	0/0:19,0:19:45.13:0,45,519	0/0:32,0:32:90.25:0,90,1021	0/0:36,0:36:96.29:0,96,1108	0/0:22,0:22:57.16:0,57,648
chr10	88539978	.	AT	A	626.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.006;DP=762;FS=1.707;HRun=1;HaplotypeScore=75.2409;InbreedingCoeff=0.9999;MQ=85.40;MQ0=0;MQRankSum=-4.653;QD=26.11;ReadPosRankSum=0.414;VQSLOD=3.5347;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,151,2397	0/0:14,0:14:42.14:0,42,669	0/0:30,0:30:87.27:0,87,1359	0/0:18,0:18:54.15:0,54,820	0/0:31,0:31:93.30:0,93,1461	0/0:35,0:35:99:0,105,1678	0/0:21,0:21:63.21:0,63,1005	0/0:37,0:37:99:0,111,1690	0/0:30,0:30:90.31:0,90,1439	0/0:35,0:35:99:0,105,1632	0/0:27,0:27:81.21:0,81,1201	0/0:27,0:27:81.23:0,81,1222	0/0:33,0:33:99:0,99,1582	0/0:28,0:28:84.26:0,84,1296	0/0:34,0:34:99:0,102,1630	0/0:27,0:27:81.28:0,81,1295	0/0:24,0:24:72.25:0,72,1145	0/0:13,0:13:39.09:0,39,574	0/0:18,0:18:54.17:0,54,841	0/0:34,0:34:99:0,102,1583	0/0:28,0:28:81.28:0,81,1295	0/0:16,0:16:48.16:0,48,767	0/0:17,0:17:51.15:0,51,780	0/0:29,0:29:87.30:0,87,1391	1/1:2,22:24:69.05:722,69,0	0/0:32,0:32:96.31:0,96,1510	0/0:29,0:28:87.25:0,87,1319	0/0:21,0:21:63.21:0,63,1006
chr10	88539981	.	A	ATCT	1212.41	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.431;DP=755;FS=0.000;HRun=0;HaplotypeScore=104.9636;InbreedingCoeff=0.9997;MQ=84.15;MQ0=0;MQRankSum=-3.372;QD=48.50;ReadPosRankSum=-0.191;VQSLOD=5.6156;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,154,2669	0/0:14,0:14:42.14:0,42,741	0/0:29,0:29:87.20:0,87,1384	0/0:16,0:16:36.13:0,36,717	0/0:30,0:30:90.30:0,90,1557	0/0:35,0:35:99:0,102,1773	0/0:22,0:22:66.21:0,66,1135	0/0:33,0:33:99:0,99,1733	0/0:30,0:30:90.31:0,90,1586	0/0:35,0:35:99:0,105,1782	0/0:26,0:26:72.25:0,72,1260	0/0:26,0:26:78.27:0,78,1357	0/0:34,0:34:99:0,99,1743	0/0:27,0:27:81.27:0,81,1392	0/0:34,0:34:99:0,102,1800	0/0:28,0:28:78.27:0,78,1372	0/0:24,0:24:72.18:0,72,1197	0/0:13,0:13:36.12:0,36,626	0/0:19,0:19:57.14:0,57,912	0/0:33,0:33:96.33:0,96,1689	0/0:29,0:29:81.28:0,81,1429	0/0:17,0:17:51.17:0,51,895	0/0:17,0:17:51.17:0,51,882	0/0:29,0:29:87.29:0,87,1507	1/1:4,21:25:69.23:1307,69,0	0/0:29,0:29:84.27:0,84,1429	0/0:29,0:28:84.29:0,84,1470	0/0:21,0:21:63.15:0,63,1047
chr10	88540208	.	TCACCAATA	T	7737.42	PASS	AB=0.512;AC=11;AF=0.196;AN=56;BaseQRankSum=11.547;DP=574;FS=6.867;HRun=0;HaplotypeScore=161.6539;InbreedingCoeff=0.8419;MQ=76.17;MQ0=0;MQRankSum=-13.923;QD=67.87;ReadPosRankSum=1.112;VQSLOD=4.5632;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:17:27.09:774,27,0	0/0:16,0:16:48.16:0,48,2086	0/0:16,0:16:42.14:0,42,1796	0/0:9,0:10:27.56:0,28,1072	0/0:28,0:28:81.28:0,81,3613	0/0:22,0:22:63.22:0,63,2551	0/0:14,0:14:42.14:0,42,1850	1/1:5,28:33:81.28:2297,81,0	0/0:17,0:17:45.15:0,45,1863	0/0:30,0:30:87.30:0,87,3754	0/0:28,0:28:84.29:0,84,3633	0/0:22,0:22:66.23:0,66,2714	0/0:22,0:22:66.23:0,66,2876	0/0:20,0:20:60.19:0,60,2569	0/0:18,0:18:54.19:0,54,2233	0/0:20,0:20:60.19:0,60,2504	0/0:23,0:23:60.18:0,60,2570	0/0:19,0:19:57.17:0,57,2327	0/0:17,0:17:51.17:0,51,1860	0/0:35,0:35:99:0,102,4310	1/1:0,2:2:3.01:86,3,0	0/0:15,0:15:45.15:0,45,1997	0/0:28,0:28:81.28:0,81,3327	0/0:5,0:5:15.05:0,15,624	1/1:1,23:24:63.22:1806,63,0	0/1:1,21:22:66.33:1741,0,66	0/0:35,0:35:99:0,105,4380	1/1:2,14:16:36.12:1033,36,0
chr10	88540505	.	T	TAG	4380.36	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.868;DP=638;FS=3.915;HRun=0;HaplotypeScore=88.5631;InbreedingCoeff=0.9839;MQ=77.59;MQ0=0;MQRankSum=-6.750;QD=43.37;ReadPosRankSum=-1.464;VQSLOD=6.0593;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.28:0,84,1201	0/0:7,0:7:21.07:0,21,301	0/0:18,0:18:39.10:0,39,512	0/0:12,0:12:29.92:0,30,327	0/0:32,0:32:93.30:0,93,1314	0/0:18,0:18:51.16:0,51,713	0/0:15,0:15:45.15:0,45,645	1/1:7,23:30:78.25:1380,78,0	0/0:21,0:21:60.19:0,60,841	0/0:34,0:34:96.31:0,96,1342	0/0:28,0:28:75.21:0,75,1020	0/0:29,0:29:81.27:0,81,1160	0/0:30,0:30:78.22:0,78,1060	0/0:29,0:29:81.22:0,81,1086	0/0:21,0:21:63.20:0,63,882	0/0:17,0:17:42.14:0,42,602	0/0:21,0:21:60.18:0,60,838	0/0:8,0:8:21.07:0,21,301	0/0:18,0:18:51.17:0,51,716	0/0:30,0:30:87.29:0,87,1237	1/1:3,22:25:60.21:1090,60,0	0/0:21,0:21:60.18:0,60,824	0/0:24,0:24:60.19:0,60,841	0/0:22,0:22:36.10:0,36,496	0/0:21,0:21:63.20:0,63,878	1/1:5,28:33:10.34:1526,10,0	0/0:29,0:29:72.18:0,72,973	1/1:1,11:12:21.07:384,21,0
chr10	88540582	.	T	TGC	2969.25	PASS	AB=0.775;AC=16;AF=0.286;AN=56;BaseQRankSum=3.060;DP=579;FS=2.121;HRun=0;HaplotypeScore=121.1902;InbreedingCoeff=0.7754;MQ=58.15;MQ0=7;MQRankSum=4.115;QD=14.70;ReadPosRankSum=1.469;VQSLOD=3.7908;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:43,1:44:99:190,0,147	0/0:6,0:6:14.90:0,15,162	0/0:19,0:7:17.91:0,18,163	0/0:15,0:7:5.11:0,5,51	0/0:20,0:20:45.03:0,45,483	0/0:19,0:19:53.69:0,54,622	0/0:23,0:23:38.91:0,39,612	0/0:6,0:23:46.12:0,46,321	0/0:20,0:20:27.10:0,27,541	0/0:28,0:28:76.03:0,76,848	0/0:27,0:27:66.05:0,66,763	0/0:21,0:21:53.96:0,54,568	1/1:4,16:20:26.94:464,27,0	0/0:20,0:20:51.02:0,51,549	1/1:10,3:14:14.21:283,14,0	0/1:4,12:16:10.21:284,0,10	0/0:23,0:23:57.09:0,57,693	0/0:17,0:17:47.91:0,48,473	1/1:4,10:14:11.24:322,11,0	1/1:7,17:24:15.05:258,15,0	0/0:17,0:19:8.95:0,9,68	0/0:23,0:23:59.53:0,60,620	1/1:4,11:15:11.37:354,11,0	1/1:5,26:32:11.48:399,11,0	0/0:19,0:19:29.90:0,30,240	0/0:15,0:23:61.90:0,62,457	1/1:5,18:23:28.13:610,28,0	0/0:7,0:12:32.18:0,32,203
chr10	88540586	.	CGTGT	C	391.21	PASS	AB=0.964;AC=9;AF=0.161;AN=56;BaseQRankSum=3.993;DP=589;FS=4.708;HRun=0;HaplotypeScore=147.0701;InbreedingCoeff=0.0558;MQ=55.77;MQ0=8;MQRankSum=0.103;QD=2.07;ReadPosRankSum=-0.503;VQSLOD=2.5072;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:45:25.81:26,0,476	0/0:6,0:6:4.17:0,4,219	0/0:21,0:8:3.01:0,3,54	0/0:15,0:6:12.04:0,12,251	0/0:14,0:20:38.12:0,38,631	0/0:19,0:19:45.14:0,45,1027	0/0:19,0:21:44.84:0,45,792	0/0:20,0:19:17.96:0,18,145	0/0:21,0:22:47.88:0,48,943	0/0:29,0:30:59.91:0,60,1307	0/0:26,0:26:13.22:0,13,1079	0/1:20,0:21:7.78:8,0,676	0/0:20,0:20:21.02:0,21,373	0/1:21,1:22:0.67:1,0,818	0/0:15,0:15:23.52:0,24,255	0/0:16,0:16:30.08:0,30,344	0/0:26,0:26:48.15:0,48,1112	0/1:16,2:18:64.94:65,0,543	0/0:14,0:14:17.83:0,18,175	0/0:20,0:20:11.31:0,11,176	0/0:18,0:19:2.95:0,3,44	0/1:22,0:22:4.09:4,0,776	0/0:15,0:16:25.61:0,26,310	0/0:31,0:31:13.10:0,13,328	1/1:4,14:19:21.06:319,21,0	0/1:28,0:28:43.53:44,0,403	0/0:22,0:22:38.83:0,39,505	0/1:14,0:13:59.04:59,0,69
chr10	88540928	.	T	TAAAA	14979.83	PASS	AB=0.585;AC=25;AF=0.446;AN=56;BaseQRankSum=5.196;DP=489;FS=14.950;HRun=4;HaplotypeScore=85.3211;InbreedingCoeff=0.9165;MQ=69.82;MQ0=0;MQRankSum=-12.035;QD=62.42;ReadPosRankSum=-1.265;VQSLOD=3.2269;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,10:14:27.09:699,27,0	0/0:6,0:6:18.06:0,18,312	0/0:13,0:13:30.06:0,30,458	0/0:6,0:6:15.01:0,15,198	0/0:25,0:25:72.24:0,72,1248	0/0:25,0:25:66.22:0,66,1144	0/0:10,0:10:30.10:0,30,520	1/1:7,21:28:69.24:1792,69,0	0/0:17,0:17:42.13:0,42,724	0/0:27,0:27:78.26:0,78,1348	0/0:14,0:14:39.13:0,39,676	0/0:25,0:25:72.23:0,72,1221	1/1:4,19:23:60.21:1481,60,0	0/0:16,0:16:39.10:0,39,622	1/1:2,20:23:60.21:1571,60,0	1/1:4,14:19:48.16:1271,48,0	0/0:24,0:24:69.24:0,69,1186	0/0:6,0:6:18.04:0,18,284	1/1:5,12:18:39.58:948,40,0	1/1:3,21:25:72.21:1754,72,0	1/1:1,7:9:12.04:320,12,0	0/0:14,0:14:36.12:0,36,624	1/1:2,15:17:51.17:1297,51,0	1/1:0,6:6:15.05:379,15,0	0/0:21,0:21:51.14:0,51,856	0/1:7,15:24:68.68:1231,0,69	1/1:6,13:19:48.16:1198,48,0	1/1:0,15:15:39.13:1040,39,0
chr10	88541040	.	AGCC	A	2201.05	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.661;DP=465;FS=2.206;HRun=0;HaplotypeScore=109.3450;InbreedingCoeff=0.9819;MQ=85.10;MQ0=0;MQRankSum=-11.891;QD=21.37;ReadPosRankSum=4.919;VQSLOD=3.3985;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,2141	0/0:6,0:6:18.06:0,18,400	0/0:20,0:20:60.12:0,60,1282	0/0:22,0:22:63.14:0,63,1210	0/0:7,0:7:21.07:0,21,449	0/0:16,0:16:48.06:0,48,1034	0/0:17,0:17:51.13:0,51,1108	0/0:26,0:26:75.20:0,75,1183	0/0:14,0:14:42.14:0,42,979	0/0:18,0:18:51.13:0,51,1090	0/0:9,0:9:24.04:0,24,507	0/0:24,0:24:72.23:0,72,1636	1/1:1,18:19:57.13:631,57,0	0/0:19,0:19:57.20:0,57,1316	1/1:1,8:9:20.65:238,21,0	1/1:2,5:7:12.98:168,13,0	0/0:28,0:28:84.29:0,84,1971	0/0:29,0:29:84.29:0,84,1984	1/1:3,13:16:33.10:403,33,0	1/1:2,13:15:24.92:261,25,0	0/0:32,0:32:96.18:0,96,1478	0/0:6,0:6:18.02:0,18,375	1/1:1,6:7:12.03:127,12,0	1/1:2,9:11:14.36:166,14,0	0/0:13,0:13:34.93:0,35,729	0/0:12,0:12:36.12:0,36,576	1/1:5,14:19:33.14:412,33,0	0/0:7,0:7:21.03:0,21,295
chr10	88541045	.	TGAG	T	2461.72	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.835;DP=458;FS=2.201;HRun=0;HaplotypeScore=105.3016;InbreedingCoeff=0.9814;MQ=84.85;MQ0=0;MQRankSum=-12.371;QD=27.66;ReadPosRankSum=4.896;VQSLOD=3.9189;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,2428	0/0:7,0:7:21.07:0,21,505	0/0:19,0:19:54.17:0,54,1271	0/0:22,0:22:63.21:0,63,1455	0/0:8,0:8:24.08:0,24,554	0/0:18,0:18:51.18:0,51,1221	0/0:17,0:17:51.17:0,51,1178	0/0:26,0:26:75.26:0,75,1848	0/0:16,0:16:48.16:0,48,1171	0/0:20,0:20:60.20:0,60,1393	0/0:11,0:11:33.11:0,33,788	0/0:23,0:23:69.24:0,69,1689	1/1:0,18:18:54.16:662,54,0	0/0:19,0:19:57.18:0,57,1327	1/1:0,8:8:21.07:260,21,0	1/1:0,5:5:15.05:187,15,0	0/0:28,0:28:84.29:0,84,2071	0/0:31,0:31:93.28:0,93,2197	1/1:1,13:14:36.08:456,36,0	1/1:1,13:14:24.08:304,24,0	0/0:33,0:33:99:0,99,2374	0/0:8,0:8:21.07:0,21,505	1/1:0,6:6:12.04:153,12,0	1/1:0,9:9:15.05:183,15,0	0/0:13,0:13:33.11:0,33,797	0/0:11,0:11:30.10:0,30,740	1/1:0,15:15:36.12:460,36,0	0/0:4,0:4:12.04:0,12,295
chr10	88541048	.	G	GT	937.62	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.652;DP=470;FS=5.988;HRun=0;HaplotypeScore=97.9329;InbreedingCoeff=0.9785;MQ=85.50;MQ0=0;MQRankSum=-12.342;QD=9.57;ReadPosRankSum=3.640;VQSLOD=3.5173;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,100,1384	0/0:7,0:7:21.07:0,21,294	0/0:21,0:21:57.62:0,58,753	0/0:22,0:22:63.16:0,63,835	0/0:7,0:7:21.07:0,21,294	0/0:19,0:19:51.17:0,51,713	0/0:16,0:16:48.16:0,48,661	0/0:27,0:27:78.22:0,78,1068	0/0:16,0:16:48.16:0,48,670	0/0:20,0:20:57.18:0,57,783	0/0:11,0:11:33.11:0,33,459	0/0:24,0:24:72.24:0,72,1006	1/1:18,0:18:45.19:211,45,0	0/0:18,0:18:54.17:0,54,738	1/1:9,0:9:18.73:76,19,0	1/1:5,0:5:13.46:55,13,0	0/0:28,0:28:84.28:0,84,1175	0/0:29,0:29:87.29:0,87,1216	1/1:15,2:17:43.10:310,43,0	1/1:14,2:16:21.73:121,22,0	0/0:33,0:33:99:0,99,1325	0/0:9,0:9:24.06:0,24,294	1/1:6,0:6:10.72:75,11,0	1/1:11,0:11:16.16:96,16,0	0/0:13,0:13:33.10:0,33,446	0/0:11,0:11:30.10:0,30,419	1/1:16,0:16:36.12:198,36,0	0/0:4,0:4:12.04:0,12,168
chr10	88541374	.	AGT	A	2533.13	PASS	AB=0.887;AC=27;AF=0.500;AN=54;BaseQRankSum=2.670;DP=593;FS=0.504;HRun=0;HaplotypeScore=102.1493;InbreedingCoeff=0.7000;MQ=73.61;MQ0=7;MQRankSum=-0.317;QD=8.20;ReadPosRankSum=2.099;VQSLOD=2.9402;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:8,0:8:12.04:0,12,184	0/0:29,0:19:2.98:0,3,21	0/0:41,0:31:3.01:0,3,45	0/0:12,0:16:26.62:0,27,258	0/0:10,0:23:21:0,21,201	0/0:13,0:21:20.99:0,21,182	0/1:17,0:18:4.95:5,0,31	0/0:23,0:23:45.13:0,45,666	0/1:11,5:16:83.72:84,0,99	0/1:19,1:20:46.65:47,0,271	0/0:11,0:21:27.88:0,28,238	1/1:13,13:25:27.08:305,27,0	0/0:10,0:18:26.87:0,27,253	1/1:8,14:23:35.93:387,36,0	1/1:11,16:27:42.12:475,42,0	0/0:26,0:26:60.15:0,60,871	0/0:7,0:21:35.02:0,35,302	1/1:14,6:19:14.18:166,14,0	1/1:11,13:24:29.92:319,30,0	1/1:25,0:24:2.50:9,2,0	0/0:7,0:11:11.37:0,11,86	1/1:5,7:13:17.88:184,18,0	1/1:12,14:26:17.82:184,18,0	1/1:3,0:14:14.68:71,15,0	1/1:23,0:22:22.46:83,22,0	1/1:9,11:22:35.77:367,36,0	1/1:11,0:11:14.85:53,15,0
chr10	88541405	.	GTGAGCA	G	1255.92	PASS	AB=0.978;AC=8;AF=0.143;AN=56;BaseQRankSum=9.356;DP=561;FS=6.352;HRun=0;HaplotypeScore=152.4398;InbreedingCoeff=0.3918;MQ=56.44;MQ0=17;MQRankSum=-8.783;QD=12.19;ReadPosRankSum=-1.962;VQSLOD=2.3107;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:16.61:0,17,382	0/0:5,0:5:12.04:0,12,402	0/0:32,0:21:57.18:0,57,1294	0/0:34,0:19:47.36:0,47,1011	0/1:15,0:15:14.79:15,0,797	0/0:25,0:25:41.15:0,41,933	0/0:15,0:15:29.47:0,29,634	0/1:21,0:21:99:139,0,121	0/0:22,0:20:51.09:0,51,1495	0/0:21,0:19:29.17:0,29,942	0/0:18,0:18:35.79:0,36,920	0/0:16,0:16:36.06:0,36,874	0/0:20,0:19:45.02:0,45,881	0/0:16,0:15:26.98:0,27,757	0/0:28,0:29:63.15:0,63,1233	0/0:23,0:24:60.20:0,60,1136	0/0:27,0:27:67.43:0,67,2051	0/0:24,0:24:10.60:0,11,1203	0/0:15,0:11:25.44:0,25,529	0/0:21,0:20:42.14:0,42,799	0/1:19,2:19:17.55:62,0,18	0/0:13,0:13:30.10:0,30,686	0/0:10,0:10:23.86:0,24,386	0/0:30,0:29:32.90:0,33,630	0/1:19,0:18:74.63:75,0,214	1/1:9,8:16:11.56:664,12,0	0/0:18,0:18:22.06:0,22,664	1/1:4,6:10:18.88:446,19,0
chr10	88541407	.	GAGCA	G	805.94	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=7.970;DP=540;FS=3.545;HRun=0;HaplotypeScore=132.6843;InbreedingCoeff=0.2979;MQ=58.84;MQ0=17;MQRankSum=-8.286;QD=6.06;ReadPosRankSum=-2.265;VQSLOD=2.4656;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,11:19:16.61:0,17,363	0/0:5,0:5:12.04:0,12,333	0/0:32,0:21:60.19:0,60,1372	0/0:34,0:18:50.82:0,51,1032	0/1:15,0:15:39:39,0,605	0/0:21,0:21:41.14:0,41,791	0/0:14,0:14:29.14:0,29,509	0/1:21,0:21:99:177,0,121	0/0:21,0:19:47.38:0,47,1228	0/0:20,0:18:10.56:0,11,837	0/1:17,0:17:3.26:3,0,700	0/0:14,0:14:36.06:0,36,675	0/0:20,0:19:45.15:0,45,827	0/0:14,0:13:27.56:0,28,569	0/0:29,0:29:61.08:0,61,1175	0/0:23,0:24:59.98:0,60,1019	0/0:25,0:25:67.34:0,67,1677	0/0:23,0:23:13.20:0,13,1010	0/1:15,0:11:10.72:11,0,556	0/0:21,0:20:42.12:0,42,729	0/1:19,0:17:17.65:30,0,18	0/0:12,0:12:30.10:0,30,611	0/0:10,0:10:23.83:0,24,292	0/0:30,0:29:33.10:0,33,594	0/1:19,0:18:1.54:2,0,291	1/1:17,0:16:11.56:415,12,0	0/0:18,0:18:32.05:0,32,665	1/1:10,0:10:18.88:274,19,0
chr10	88541411	.	A	ATGTG	2989.14	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-1.504;DP=536;FS=10.003;HRun=0;HaplotypeScore=135.0986;InbreedingCoeff=0.9680;MQ=62.53;MQ0=16;MQRankSum=-7.555;QD=37.36;ReadPosRankSum=-3.681;VQSLOD=2.6378;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:18.06:0,18,310	0/0:4,0:4:9.03:0,9,155	0/0:31,0:21:57.19:0,57,957	0/0:33,0:20:51.65:0,52,866	0/0:15,0:15:26.99:0,27,431	0/0:21,0:21:29.40:0,29,584	0/0:16,0:16:27.05:0,27,421	1/1:14,14:28:66.23:1586,66,0	0/0:20,0:18:36.09:0,36,599	0/0:19,0:17:42.13:0,42,669	0/0:16,0:16:23.38:0,23,406	0/0:13,0:13:26.98:0,27,411	0/0:18,0:17:39.13:0,39,675	0/0:12,0:11:27.09:0,27,469	0/0:27,0:27:57.20:0,57,991	0/0:22,0:22:54.14:0,54,889	0/0:25,0:25:54.05:0,54,861	0/0:21,0:21:30.17:0,30,716	0/0:17,0:14:33.04:0,33,484	0/0:19,0:18:36.12:0,36,626	1/1:7,14:22:12.04:262,12,0	0/0:12,0:12:30.10:0,30,516	0/0:9,0:9:18.05:0,18,282	0/0:29,0:28:30.05:0,30,474	0/0:19,0:18:29.82:0,30,434	1/1:11,6:17:50.95:856,51,0	0/0:18,0:18:45.14:0,45,741	1/1:7,4:11:27.05:443,27,0
chr10	88541454	.	C	CGT	154.85	PASS	AB=0.909;AC=9;AF=0.214;AN=42;BaseQRankSum=-2.320;DP=441;FS=5.338;HRun=0;HaplotypeScore=132.2133;InbreedingCoeff=0.3285;MQ=67.28;MQ0=3;MQRankSum=0.859;QD=1.25;ReadPosRankSum=-4.704;VQSLOD=0.6443;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:19:0.59:1,0,1	./.	./.	./.	./.	0/0:16,0:18:5.68:0,6,28	0/1:11,0:14:4.24:4,0,9	1/1:24,0:23:1.55:4,2,0	0/0:19,0:19:12.01:0,12,127	1/1:25,0:25:15.43:133,15,0	1/1:7,8:17:5.65:87,6,0	0/0:8,0:8:2.84:0,3,14	0/0:11,0:14:11.36:0,11,56	0/0:9,0:10:5.68:0,6,28	0/0:18,0:21:8.52:0,9,42	0/0:12,0:17:16.24:0,16,76	0/1:15,8:24:25.40:38,0,25	0/0:12,0:12:2.76:0,3,16	0/0:12,0:12:2.84:0,3,14	0/0:13,0:17:8.52:0,9,42	./.	0/0:12,0:15:3.31:0,3,15	0/0:5,0:6:2.84:0,3,14	./.	0/0:10,0:14:11.36:0,11,56	./.	0/0:12,0:16:11.36:0,11,56	0/0:11,0:11:5.68:0,6,28
chr10	88541501	.	GTGTATGAGTA	G	2643.79	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=10.043;DP=504;FS=22.095;HRun=0;HaplotypeScore=169.4546;InbreedingCoeff=0.2527;MQ=65.80;MQ0=9;MQRankSum=-8.998;QD=13.99;ReadPosRankSum=1.279;VQSLOD=1.3041;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:32.95:0,33,682	0/0:7,0:7:21.07:0,21,593	0/0:27,0:19:57.20:0,57,1638	0/0:29,0:24:66.01:0,66,1903	0/0:21,0:20:47.62:0,48,1082	0/0:18,0:17:43.62:0,44,924	0/0:25,0:25:55.03:0,55,1284	1/1:17,0:17:47.76:705,48,0	0/0:20,0:20:57.18:0,57,2280	0/0:28,0:27:78.26:0,78,2592	0/0:22,0:22:39.05:0,39,1065	0/0:11,0:11:4.45:0,4,503	0/1:14,0:14:99:180,0,199	0/0:14,0:14:8.35:0,8,666	0/1:18,0:18:99:158,0,251	0/1:22,0:22:99:232,0,317	0/0:29,0:29:52.06:0,52,1690	0/0:15,0:14:33:0,33,659	0/1:15,0:15:5.35:5,0,286	0/1:19,0:19:99:117,0,268	1/1:13,0:12:8.54:136,9,0	0/0:16,0:16:40.34:0,40,1032	0/1:13,0:13:18.36:18,0,210	0/0:15,0:15:20.91:0,21,164	0/1:16,0:16:99:229,0,205	1/1:14,0:14:42.14:658,42,0	0/1:14,0:14:99:189,0,136	1/1:2,12:13:6.02:191,6,0
chr10	88541506	.	TGA	T	1355.84	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=10.140;DP=495;FS=15.190;HRun=0;HaplotypeScore=107.0444;InbreedingCoeff=0.8236;MQ=71.02;MQ0=8;MQRankSum=-8.375;QD=19.37;ReadPosRankSum=0.153;VQSLOD=2.6285;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:26.82:0,27,206	0/0:7,0:7:21.07:0,21,405	0/0:30,0:22:66.22:0,66,1236	0/0:31,0:26:71.12:0,71,1253	0/0:23,0:22:53.90:0,54,1033	0/0:18,0:17:40.94:0,41,694	0/0:24,0:24:50.32:0,50,944	1/1:0,16:16:48.16:701,48,0	0/0:18,0:18:51.16:0,51,949	0/0:26,0:25:75.21:0,75,1385	0/0:16,0:16:33.58:0,34,627	0/0:11,0:11:24.85:0,25,465	0/1:14,0:14:6.53:7,0,124	0/0:14,0:14:31.65:0,32,549	0/0:18,0:18:14.18:0,14,219	0/0:23,0:23:19.42:0,19,332	0/0:23,0:23:45.14:0,45,818	0/0:13,0:13:33.09:0,33,576	0/0:17,0:17:38.20:0,38,286	0/0:20,0:20:23.99:0,24,278	1/1:6,7:12:11.78:176,12,0	0/0:16,0:16:42.61:0,43,774	0/0:13,0:13:26.17:0,26,212	0/0:16,0:16:20.86:0,21,154	0/0:16,0:16:12.25:0,12,207	1/1:0,13:13:39.13:572,39,0	0/0:17,0:17:10.03:0,10,159	1/1:14,0:13:6:53,6,0
chr10	88541801	.	TA	T	2658.94	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.292;DP=567;FS=1.503;HRun=2;HaplotypeScore=61.8621;InbreedingCoeff=0.9911;MQ=73.16;MQ0=0;MQRankSum=-0.546;QD=32.83;ReadPosRankSum=0.073;VQSLOD=3.3456;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.18:0,54,809	0/0:4,0:4:12.04:0,12,180	0/0:14,0:14:42.13:0,42,597	0/0:14,0:14:39.07:0,39,531	0/0:38,0:38:99:0,111,1592	0/0:19,0:19:57.17:0,57,815	0/0:15,0:15:45.15:0,45,674	1/1:0,26:26:78.22:972,78,0	0/0:30,0:30:90.29:0,90,1323	0/0:24,0:24:72.02:0,72,1014	0/0:22,0:22:66.21:0,66,969	0/0:29,0:29:87.25:0,87,1226	0/0:19,0:19:57.19:0,57,852	0/0:20,0:20:60.17:0,60,855	0/0:22,0:22:66.22:0,66,989	0/0:25,0:25:75.22:0,75,1065	0/0:18,0:18:51.16:0,51,744	0/0:17,0:17:51.08:0,51,707	0/0:17,0:17:51.17:0,51,763	0/0:22,0:22:63.09:0,63,884	1/1:0,17:17:42.12:545,42,0	0/0:12,0:12:36.12:0,36,538	0/0:19,0:19:54.16:0,54,759	0/0:13,0:13:39.11:0,39,545	0/0:24,0:24:69.21:0,69,1011	1/1:1,24:25:28.15:835,28,0	0/0:31,0:31:93.29:0,93,1348	1/1:0,13:13:36.12:467,36,0
chr10	88542290	.	AT	A	160.19	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.775;DP=529;FS=0.000;HRun=9;HaplotypeScore=74.2820;InbreedingCoeff=0.9819;MQ=73.66;MQ0=1;MQRankSum=-2.600;QD=10.68;ReadPosRankSum=0.836;VQSLOD=2.5392;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,12:15:29.90:255,30,0	0/0:8,0:8:21.05:0,21,234	0/0:19,1:18:44.34:0,44,409	0/0:15,0:11:18.04:0,18,198	0/0:21,0:20:54.67:0,55,547	0/0:19,0:19:51.14:0,51,580	0/0:16,0:16:42.10:0,42,466	0/0:22,0:22:57.13:0,57,633	0/0:29,0:29:78.22:0,78,891	0/0:26,0:26:78.22:0,78,879	0/0:24,0:24:69.26:0,69,690	0/0:17,0:17:45.13:0,45,520	0/0:20,0:20:54.15:0,54,615	0/0:18,0:18:54.15:0,54,614	0/0:15,0:15:30.07:0,30,336	0/0:11,0:11:26.82:0,27,289	0/0:27,0:27:72.16:0,72,805	0/0:15,0:15:45.12:0,45,508	0/0:24,0:24:54.15:0,54,614	0/0:15,0:15:45.11:0,45,498	0/0:16,0:16:41.99:0,42,446	0/0:14,0:14:42.12:0,42,483	0/0:18,0:18:48.04:0,48,535	0/0:8,0:8:21.06:0,21,242	0/0:23,0:23:68.01:0,68,767	0/0:22,0:22:63.17:0,63,711	0/0:34,0:34:87.21:0,87,973	0/0:15,0:15:45.13:0,45,519
chr10	88542338	.	C	CT	4877.76	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-4.132;DP=580;FS=0.000;HRun=8;HaplotypeScore=61.9376;InbreedingCoeff=0.9985;MQ=80.48;MQ0=0;MQRankSum=-1.093;QD=27.56;ReadPosRankSum=-0.171;VQSLOD=5.1292;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:17:39.12:450,39,0	0/0:10,0:10:27.01:0,27,247	0/0:20,0:21:29.56:0,30,224	0/0:16,0:17:34.39:0,34,277	0/0:28,0:28:84:0,84,755	0/0:21,0:21:54.02:0,54,494	0/0:8,0:8:24.01:0,24,220	0/0:32,0:32:84.02:0,84,769	0/0:26,0:26:63.02:0,63,577	0/0:26,0:26:72.03:0,72,659	0/0:21,0:21:57.03:0,57,521	0/0:19,0:19:54.03:0,54,494	1/1:3,18:21:48.13:554,48,0	0/0:19,0:19:57.03:0,57,522	1/1:1,21:21:54.16:623,54,0	1/1:3,19:22:29.70:596,30,0	0/0:26,0:26:63:0,63,570	0/0:28,0:28:78.02:0,78,708	1/1:3,15:18:45.10:497,45,0	1/1:3,14:17:44.92:498,45,0	0/0:7,0:7:21.01:0,21,192	0/0:16,0:16:45.02:0,45,412	1/1:2,22:24:60.18:693,60,0	1/1:0,9:9:27.08:312,27,0	0/0:27,0:27:81.04:0,81,741	0/0:31,0:31:78.02:0,78,710	1/1:6,21:27:57.17:656,57,0	0/0:20,0:20:56.99:0,57,514
chr10	88542507	.	TG	T	10503.08	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=12.521;DP=711;FS=0.591;HRun=4;HaplotypeScore=71.1548;InbreedingCoeff=0.9998;MQ=98.72;MQ0=0;MQRankSum=-9.105;QD=29.92;ReadPosRankSum=5.289;VQSLOD=4.7522;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,46:50:99:1468,123,0	0/0:11,0:11:33.11:0,33,462	0/0:39,0:39:99:0,108,1442	0/0:39,0:39:95.67:0,96,1260	0/0:32,0:32:84.23:0,84,1105	0/0:12,0:12:30.10:0,30,420	0/0:27,0:27:69.22:0,69,951	1/1:5,25:30:72.22:864,72,0	0/0:27,0:27:78.21:0,78,1051	0/0:21,0:21:54.18:0,54,754	0/0:16,0:16:39.13:0,39,546	0/0:18,0:18:54.15:0,54,720	1/1:0,20:20:57.17:684,57,0	0/0:28,0:28:84.25:0,84,1127	1/1:0,22:22:60.18:720,60,0	1/1:4,31:35:42.29:930,42,0	0/0:24,0:24:72.22:0,72,990	0/0:24,0:24:63.21:0,63,875	1/1:2,18:20:51.09:582,51,0	1/1:4,25:29:75.23:894,75,0	1/1:2,31:33:78.24:936,78,0	0/0:19,0:19:51.13:0,51,650	1/1:7,15:22:42.06:485,42,0	1/1:0,24:24:69.21:828,69,0	0/0:23,0:23:66.18:0,66,863	1/1:2,22:24:72.21:852,72,0	1/1:2,26:28:75.23:900,75,0	1/1:0,13:13:30.09:360,30,0
chr10	88542511	.	GT	G	2566.03	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=18.829;DP=702;FS=4.132;HRun=2;HaplotypeScore=96.3611;InbreedingCoeff=0.6630;MQ=99.33;MQ0=0;MQRankSum=-3.901;QD=7.37;ReadPosRankSum=7.196;VQSLOD=0.9744;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:51,2:53:4.82:521,5,0	0/0:11,0:11:33.11:0,33,494	0/0:39,0:39:99:0,115,1613	0/0:39,0:39:95.86:0,96,1332	0/0:29,0:29:72.22:0,72,1005	0/0:10,0:10:30.10:0,30,439	0/0:26,0:26:75.21:0,75,1045	0/1:27,0:27:10.54:133,0,11	0/0:28,0:28:78.22:0,78,1100	0/0:19,0:19:57.19:0,57,837	0/0:15,0:15:45.12:0,45,625	0/0:18,0:18:51.17:0,51,762	1/1:20,0:20:50.41:221,50,0	0/0:29,0:29:84.26:0,84,1200	1/1:22,0:22:51.13:197,51,0	0/1:34,0:34:18.27:191,0,18	0/0:25,0:25:75.21:0,75,1079	0/0:22,0:22:66.19:0,66,956	0/1:21,0:21:36:94,0,36	1/1:27,0:27:25.63:251,26,0	1/1:33,0:33:44.87:243,45,0	0/0:20,0:20:45.07:0,45,613	1/1:16,1:17:15.15:179,15,0	1/1:26,0:26:16.46:192,16,0	0/0:24,0:24:60.19:0,60,854	1/1:22,2:24:58.85:275,59,0	0/1:30,0:30:18.85:192,0,19	1/1:14,0:14:4.29:81,4,0
chr10	88543672	.	TG	T	3861.35	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.726;DP=694;FS=4.277;HRun=1;HaplotypeScore=66.9872;InbreedingCoeff=0.9977;MQ=88.38;MQ0=0;MQRankSum=-3.064;QD=38.61;ReadPosRankSum=0.749;VQSLOD=4.3097;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1772	0/0:12,0:12:36.11:0,36,552	0/0:27,0:27:78.26:0,78,1209	0/0:23,0:23:66.19:0,66,979	0/0:16,0:16:48.16:0,48,766	0/0:24,0:24:72.18:0,72,1117	0/0:20,0:20:60.20:0,60,959	1/1:0,27:27:81.24:1099,81,0	0/0:22,0:22:66.23:0,66,1055	0/0:38,0:38:99:0,114,1804	0/0:17,0:17:51.17:0,51,813	0/0:15,0:15:45.15:0,45,717	0/0:29,0:29:87.30:0,87,1389	0/0:17,0:17:51.17:0,51,815	0/0:39,0:39:99:0,117,1859	0/0:32,0:32:96.33:0,96,1535	0/0:42,0:42:99:0,123,1917	0/0:12,0:12:33.11:0,33,527	0/0:21,0:20:63.21:0,63,986	0/0:29,0:29:87.28:0,87,1351	1/1:0,29:29:72.24:1007,72,0	0/0:21,0:21:63.21:0,63,1007	0/0:19,0:19:57.19:0,57,909	0/0:24,0:24:72.25:0,72,1148	0/0:29,0:29:87.28:0,87,1367	1/1:1,21:22:18.24:833,18,0	0/0:29,0:28:87.30:0,87,1390	1/1:0,22:22:66.22:923,66,0
chr10	88543941	.	G	GTGGGCA	3375.51	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.107;DP=666;FS=7.959;HRun=0;HaplotypeScore=135.4533;InbreedingCoeff=0.9995;MQ=81.19;MQ0=0;MQRankSum=-9.281;QD=68.89;ReadPosRankSum=-1.183;VQSLOD=3.9557;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,15:28:66.20:2138,66,0	0/0:13,0:13:36.11:0,36,786	0/0:26,0:25:72.22:0,72,1548	0/0:12,0:12:33.07:0,33,622	0/0:25,0:25:69.22:0,69,1544	0/0:25,0:25:75.26:0,75,1720	0/0:25,0:25:72.23:0,72,1612	0/0:28,0:28:69.21:0,69,1463	0/0:24,0:24:66.21:0,66,1478	0/0:30,0:30:78.26:0,78,1756	0/0:14,0:14:39.13:0,39,899	0/0:21,0:21:60.17:0,60,1335	0/0:29,0:29:81.28:0,81,1868	0/0:19,0:19:54.19:0,54,1242	0/0:37,0:37:99:0,102,2352	0/0:29,0:29:84.29:0,84,1881	0/0:34,0:34:99:0,99,2186	0/0:11,0:11:33.09:0,33,714	0/0:22,0:22:60.15:0,60,1274	0/0:12,0:12:36.12:0,36,830	0/0:29,0:29:75.26:0,75,1722	0/0:19,0:19:57.20:0,57,1236	0/0:22,0:22:60.21:0,60,1357	0/0:27,0:27:75.26:0,75,1729	1/1:6,12:21:36.12:1238,36,0	0/0:31,0:31:93.30:0,93,2098	0/0:39,0:39:99:0,114,2532	0/0:14,0:14:42.14:0,42,968
chr10	88544095	.	GT	G	10645.65	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=12.176;DP=706;FS=2.513;HRun=7;HaplotypeScore=68.9059;InbreedingCoeff=0.9978;MQ=80.95;MQ0=1;MQRankSum=-1.054;QD=24.64;ReadPosRankSum=2.084;VQSLOD=5.5348;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,35:39:81.18:826,81,0	0/0:19,0:19:57.18:0,57,717	0/0:29,1:29:46.98:0,47,656	0/0:17,0:17:38.87:0,39,388	1/1:2,21:23:59.67:585,60,0	1/1:1,23:24:54.12:551,54,0	1/1:0,31:31:75.17:765,75,0	0/0:24,0:24:69.21:0,69,855	0/0:24,0:24:69.22:0,69,866	0/0:21,0:21:57.18:0,57,717	0/0:15,0:15:42.06:0,42,496	1/1:0,22:22:54.12:551,54,0	1/1:4,28:32:72.16:734,72,0	1/1:0,22:22:51.12:520,51,0	1/1:3,30:33:81.18:826,81,0	1/1:1,21:22:48.11:489,48,0	0/0:14,0:14:39.12:0,39,490	1/1:1,5:6:15.03:153,15,0	1/1:4,21:25:60.09:592,60,0	1/1:3,34:37:99:996,99,0	0/0:26,0:26:75.07:0,75,839	1/1:2,21:23:60.13:611,60,0	1/1:1,23:24:63.14:642,63,0	1/1:2,21:23:57.13:581,57,0	0/0:29,0:29:81.26:0,81,1018	0/0:34,0:34:96.28:0,96,1183	1/1:3,43:46:99:1223,120,0	0/0:21,0:21:60.18:0,60,742
chr10	88544429	.	A	ATCTG	25827.69	PASS	AB=0.582;AC=41;AF=0.732;AN=56;BaseQRankSum=-13.778;DP=761;FS=0.000;HRun=0;HaplotypeScore=115.4462;InbreedingCoeff=0.9070;MQ=68.13;MQ0=1;MQRankSum=-3.620;QD=42.62;ReadPosRankSum=4.847;VQSLOD=4.8925;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,21:28:37.01:916,37,0	0/0:13,0:13:30.10:0,30,522	0/0:26,0:25:42.61:0,43,644	0/0:22,0:22:45.11:0,45,699	1/1:5,19:29:42.14:1066,42,0	1/1:2,22:24:36.59:914,37,0	1/1:12,15:30:30.10:705,30,0	1/1:21,24:48:99:2014,99,0	0/0:25,0:25:60.21:0,60,1043	0/0:28,0:27:78.25:0,78,1295	0/0:23,0:23:54.17:0,54,908	1/1:5,26:33:66.23:1673,66,0	1/1:2,32:36:75.26:1901,75,0	1/1:1,19:23:30.10:761,30,0	1/1:4,27:31:60.21:1522,60,0	1/1:7,13:22:29.90:761,30,0	0/0:18,0:18:42.14:0,42,725	1/1:0,9:9:21.07:533,21,0	1/1:6,21:27:65.88:1284,66,0	1/1:8,24:33:45.15:1140,45,0	1/1:5,30:35:48.16:1219,48,0	1/1:3,23:27:45.15:1141,45,0	1/1:3,20:24:54.18:1370,54,0	1/1:3,12:15:27.09:619,27,0	1/1:7,26:33:60.21:1523,60,0	0/1:11,25:39:63.19:1949,0,63	1/1:7,33:40:90.31:2284,90,0	1/1:0,18:18:21.07:532,21,0
chr10	88545855	.	G	GA	555.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.050;DP=563;FS=7.095;HRun=8;HaplotypeScore=96.5360;InbreedingCoeff=0.9116;MQ=89.15;MQ0=0;MQRankSum=-2.906;QD=22.22;ReadPosRankSum=-0.716;VQSLOD=3.2667;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:62.99:0,63,571	0/0:7,0:7:9:0,9,82	0/0:21,0:21:24.43:0,24,221	0/0:20,0:20:11.92:0,12,270	0/0:16,0:16:39.02:0,39,357	0/0:14,0:14:33.01:0,33,302	0/0:26,0:26:54.02:0,54,494	0/0:27,0:27:63:0,63,567	0/0:14,0:14:36.01:0,36,329	0/0:14,0:14:36.01:0,36,330	0/0:10,0:10:27.01:0,27,247	0/0:17,0:17:42.02:0,42,384	0/0:21,0:22:62.07:0,62,555	0/0:18,0:18:45.01:0,45,412	0/0:34,0:34:93.04:0,93,851	0/0:24,0:25:68.06:0,68,610	0/0:37,0:37:96.04:0,96,878	0/0:29,0:29:66:0,66,604	0/0:25,0:25:66.01:0,66,598	0/0:13,0:13:36.02:0,36,329	0/0:11,0:11:29.99:0,30,269	0/0:12,0:12:29.99:0,30,270	0/0:16,0:16:39.02:0,39,357	0/0:26,0:26:66.02:0,66,604	1/1:5,20:25:35.68:650,36,0	0/0:25,0:25:63.02:0,63,577	0/0:23,0:23:47.99:0,48,434	0/0:8,0:8:24.01:0,24,220
chr10	88547532	.	TTCTCTCTCTCTCTCTCTCTCTC	T	526.29	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=0.538;DP=555;FS=1.695;HRun=0;HaplotypeScore=257.4721;InbreedingCoeff=0.5379;MQ=65.57;MQ0=27;MQRankSum=1.169;QD=5.26;ReadPosRankSum=1.671;VQSLOD=2.2941;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:24.06:0,24,958	0/0:10,0:9:4.24:0,4,28	0/0:38,0:18:1.55:0,2,5	0/0:37,0:15:0:0,0,0	0/0:19,0:19:6:0,6,107	0/0:20,0:20:3.48:0,3,240	0/0:18,0:16:8.62:0,9,464	0/0:37,0:37:16.29:0,16,338	0/0:10,0:10:9.03:0,9,334	0/0:21,0:21:12.93:0,13,954	0/0:19,0:19:3.01:0,3,103	0/0:16,0:16:6.02:0,6,401	1/1:11,1:11:3.01:170,3,0	0/0:15,0:14:21.94:0,22,1173	1/1:18,0:19:6.01:75,6,0	./.	0/0:19,0:15:12.04:0,12,700	0/0:18,0:17:31.63:0,32,1605	1/1:25,0:28:9:251,9,0	./.	0/0:20,0:19:9.92:0,10,248	0/0:20,0:20:26.37:0,26,1774	1/1:7,3:9:0.47:1,0,0	1/1:16,0:17:2.99:23,3,0	0/0:18,0:18:6.02:0,6,290	0/0:17,0:18:15.79:0,16,393	1/1:11,0:13:3.01:137,3,0	0/0:17,0:14:3.01:0,3,89
chr10	88547547	.	T	TCCCTCTCC	2599.39	PASS	AB=0.709;AC=11;AF=0.196;AN=56;BaseQRankSum=2.318;DP=541;FS=9.194;HRun=0;HaplotypeScore=123.6253;InbreedingCoeff=0.6575;MQ=47.93;MQ0=59;MQRankSum=3.277;QD=18.84;ReadPosRankSum=4.045;VQSLOD=2.1382;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:33:54.12:0,54,926	0/0:13,0:11:18.26:0,18,225	0/0:29,0:9:18.73:0,19,214	0/0:30,0:8:9.06:0,9,306	1/1:20,0:20:26.30:335,26,0	0/1:6,18:28:10.76:98,0,11	1/1:19,0:16:29.92:422,30,0	0/0:27,0:26:72:0,72,905	0/0:15,0:14:20.93:0,21,372	0/0:19,0:17:48.14:0,48,765	0/0:19,0:19:26.92:0,27,351	0/1:5,0:19:8.79:72,0,9	0/0:9,0:7:18.02:0,18,222	1/1:13,0:12:27.70:565,28,0	0/0:15,0:15:24.04:0,24,332	0/0:16,0:16:27.07:0,27,381	0/0:25,0:16:34.21:0,34,474	0/1:19,0:17:58.63:600,0,59	0/0:19,0:19:54.15:0,54,828	0/0:12,0:11:17.99:0,18,222	0/0:21,0:19:15.33:0,15,217	1/1:18,0:17:31.71:679,32,0	0/0:9,0:8:12.03:0,12,175	0/0:19,0:16:15.05:0,15,250	0/0:15,0:15:33.08:0,33,577	0/0:21,0:17:48.83:0,49,756	0/0:9,0:9:18.04:0,18,284	0/0:21,0:14:36.46:0,36,506
chr10	88547592	.	CTGTGTGTG	C	1461.08	PASS	AB=0.926;AC=15;AF=0.288;AN=52;BaseQRankSum=0.118;DP=532;FS=13.872;HRun=0;HaplotypeScore=160.8009;InbreedingCoeff=0.3634;MQ=45.47;MQ0=37;MQRankSum=-0.578;QD=7.73;ReadPosRankSum=-0.791;VQSLOD=1.9555;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:35:59.57:0,60,1559	0/0:10,0:9:14.75:0,15,423	./.	./.	1/1:4,0:15:0.47:1,0,0	0/1:27,0:29:12.27:106,0,12	1/1:19,0:17:1.49:102,1,0	1/1:22,2:23:25.93:369,26,0	0/0:18,0:17:33.11:0,33,1019	0/0:12,0:12:20.66:0,21,561	0/0:18,0:18:27.09:0,27,823	0/1:21,0:20:17.53:69,0,18	0/0:15,0:13:30.10:0,30,880	0/1:14,0:13:31.50:32,0,61	0/0:21,0:21:36.12:0,36,1149	0/0:24,0:24:36.95:0,37,1148	0/0:31,0:25:39.42:0,39,898	0/0:24,0:22:21.24:0,21,146	0/0:26,0:24:56.76:0,57,1058	0/0:16,0:13:18.06:0,18,564	1/1:10,8:17:3.01:77,3,0	0/1:17,0:17:38.22:67,0,38	0/0:21,0:19:18.06:0,18,582	0/0:25,0:22:26.93:0,27,819	0/0:18,0:18:33.11:0,33,1068	0/1:14,11:21:80.74:658,0,81	0/0:19,0:19:43.80:0,44,1009	1/1:4,3:5:6.02:134,6,0
chr10	88547614	.	G	GCA	253.40	PASS	AB=0.888;AC=4;AF=0.071;AN=56;BaseQRankSum=0.935;DP=581;FS=6.145;HRun=0;HaplotypeScore=121.2202;InbreedingCoeff=0.2373;MQ=50.46;MQ0=24;MQRankSum=-2.138;QD=4.15;ReadPosRankSum=-0.594;VQSLOD=2.1030;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:78.25:0,78,1134	0/0:9,0:8:18.06:0,18,290	0/0:22,0:13:36.01:0,36,519	0/0:22,0:13:30.10:0,30,468	0/0:17,0:17:14.99:0,15,227	0/0:33,0:33:53.79:0,54,533	0/0:22,0:21:38.83:0,39,473	0/1:21,6:27:99:310,0,581	0/0:17,0:16:36.05:0,36,537	0/0:15,0:15:42.12:0,42,648	0/0:20,0:20:39.12:0,39,585	0/0:22,0:22:41.69:0,42,426	0/0:19,0:17:38.80:0,39,341	0/0:10,0:9:17.97:0,18,173	0/0:24,0:24:56.86:0,57,648	0/0:30,0:29:58.36:0,58,596	0/0:27,0:24:48.56:0,49,643	0/0:21,0:20:56.83:0,57,528	0/0:25,0:24:72.08:0,72,845	0/0:18,0:15:27.02:0,27,315	1/1:11,0:11:2.04:6,2,0	0/0:16,0:16:35.84:0,36,357	0/0:23,0:21:27.02:0,27,298	0/0:27,0:26:39.06:0,39,412	0/0:18,0:18:38.94:0,39,358	0/1:22,1:22:31.36:31,0,456	0/0:22,0:22:53.33:0,53,512	0/0:6,0:4:4.79:0,5,26
chr10	88549805	.	C	CT	2510.01	PASS	AB=0.722;AC=30;AF=0.536;AN=56;BaseQRankSum=0.950;DP=626;FS=6.347;HRun=15;HaplotypeScore=98.1547;InbreedingCoeff=0.2612;MQ=57.67;MQ0=10;MQRankSum=-1.845;QD=5.48;ReadPosRankSum=-2.344;VQSLOD=2.0840;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:90.63:0,91,553	0/0:8,1:10:7.83:0,8,42	0/0:11,0:4:8.61:0,9,46	0/0:9,0:6:5.54:0,6,26	0/1:26,4:28:60.57:78,0,61	1/1:8,7:15:8.99:76,9,0	1/1:14,10:25:14.10:243,14,0	1/1:30,0:30:49.19:232,49,0	0/0:17,0:18:27.69:0,28,159	0/0:25,0:28:20.29:0,20,106	0/0:18,0:19:20.52:0,21,127	0/1:15,9:24:13.60:60,0,14	0/1:14,19:33:12.51:60,0,13	0/1:9,10:19:32.86:33,0,48	0/1:8,10:17:18.17:68,0,18	1/1:1,7:10:4.30:86,4,0	0/0:32,0:32:13.60:0,14,247	1/1:4,12:16:14.98:126,15,0	0/1:19,4:26:9.94:160,0,10	0/1:8,16:25:2.91:151,0,3	1/1:20,0:20:3.78:129,4,0	1/1:16,10:25:9.11:163,9,0	0/1:16,6:23:1.91:205,0,2	0/1:8,10:20:5.36:96,0,5	1/1:10,20:31:32.05:287,32,0	1/1:22,0:21:35.49:168,35,0	0/1:14,5:21:19.16:130,0,19	1/1:21,0:21:21.72:146,22,0
chr10	88549809	.	T	TC	2469.36	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-0.127;DP=634;FS=12.138;HRun=0;HaplotypeScore=94.8324;InbreedingCoeff=0.7594;MQ=56.05;MQ0=14;MQRankSum=0.631;QD=17.51;ReadPosRankSum=3.367;VQSLOD=5.2823;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:45,0:42:3.87:137,0,4	0/0:9,0:9:24.03:0,24,244	0/0:11,0:4:12.03:0,12,153	0/0:8,0:5:2.14:0,2,67	0/0:32,0:30:75.16:0,75,649	0/0:13,0:13:23.64:0,24,186	0/0:27,0:26:55.31:0,55,402	1/1:5,29:34:85.61:885,86,0	0/0:19,0:18:53.95:0,54,577	0/0:31,0:30:80.94:0,81,790	0/0:19,0:19:56.82:0,57,568	0/0:24,0:23:32.84:0,33,308	0/0:31,0:31:24.76:0,25,233	0/0:19,0:19:21.56:0,22,262	0/0:17,0:16:12.83:0,13,149	0/0:10,0:10:6.03:0,6,68	0/0:29,0:29:79.62:0,80,907	0/0:17,0:17:14.01:0,14,115	0/0:30,0:29:55.12:0,55,508	0/0:27,0:27:39.17:0,39,364	1/1:6,12:18:45.05:512,45,0	0/0:25,0:24:48.41:0,48,386	0/0:25,0:24:43.17:0,43,353	0/0:20,0:20:21.03:0,21,199	0/0:30,0:30:30.01:0,30,244	1/1:2,20:21:62.99:651,63,0	0/0:20,0:20:48.51:0,49,357	1/1:2,20:22:0.86:437,1,0
chr10	88550479	.	TGA	T	5287.64	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.091;DP=717;FS=0.785;HRun=0;HaplotypeScore=81.2798;InbreedingCoeff=0.9974;MQ=81.45;MQ0=0;MQRankSum=-1.679;QD=43.34;ReadPosRankSum=-0.710;VQSLOD=5.7263;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.26:0,75,1523	0/0:9,0:9:27.09:0,27,549	0/0:14,0:14:39.13:0,39,755	0/0:23,0:23:57.13:0,57,1041	0/0:35,0:35:99:0,105,2122	0/0:37,0:37:99:0,111,2255	0/0:25,0:25:75.26:0,75,1524	1/1:0,33:33:96.30:1508,96,0	0/0:21,0:21:63.17:0,63,1239	0/0:32,0:32:93.32:0,93,1871	0/0:20,0:20:60.21:0,60,1219	0/0:25,0:25:75.26:0,75,1503	0/0:33,0:33:99:0,99,2002	0/0:27,0:27:81.28:0,81,1642	0/0:32,0:32:96.33:0,96,1949	0/0:25,0:25:75.26:0,75,1524	0/0:19,0:19:57.20:0,57,1157	0/0:25,0:25:75.26:0,75,1517	0/0:25,0:25:75.26:0,75,1500	0/0:30,0:30:90.30:0,90,1778	1/1:0,44:44:99:2000,123,0	0/0:21,0:21:63.22:0,63,1264	0/0:20,0:20:60.21:0,60,1218	0/0:20,0:20:60.21:0,60,1219	0/0:21,0:21:63.22:0,63,1226	1/1:1,30:31:93.28:1486,93,0	0/0:31,0:31:93.32:0,93,1887	1/1:0,14:14:18.06:294,18,0
chr10	88550732	.	GA	G	10750.76	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=16.321;DP=539;FS=5.193;HRun=4;HaplotypeScore=85.3360;InbreedingCoeff=0.9903;MQ=79.54;MQ0=0;MQRankSum=-1.757;QD=32.09;ReadPosRankSum=3.187;VQSLOD=5.4880;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:48.15:576,48,0	0/0:3,0:3:9.03:0,9,126	0/0:18,0:18:45.12:0,45,572	0/0:18,0:18:31.44:0,31,553	1/1:0,20:20:54.16:648,54,0	1/1:0,31:31:84.26:1008,84,0	1/1:2,21:23:54.17:648,54,0	0/0:27,0:27:81.26:0,81,1119	0/0:19,0:19:54.16:0,54,724	0/0:17,0:17:48.16:0,48,669	0/0:12,0:12:33.10:0,33,445	1/1:1,12:13:36.11:432,36,0	1/1:1,19:20:54.17:647,54,0	1/1:1,13:14:36.11:432,36,0	1/1:1,28:29:84.26:1007,84,0	1/1:2,21:23:57.17:683,57,0	0/0:23,0:23:66.11:0,66,845	1/1:2,14:16:42.13:504,42,0	1/1:0,22:22:66.14:752,66,0	1/1:0,14:14:42.13:501,42,0	0/0:20,0:20:60.19:0,60,823	1/1:0,17:17:39.12:467,39,0	1/1:0,8:8:18.04:215,18,0	1/1:0,18:18:54.17:648,54,0	1/1:1,13:14:39.12:468,39,0	0/0:27,0:27:78.26:0,78,1092	1/1:1,33:34:93.28:1115,93,0	0/0:20,0:20:57.19:0,57,798
chr10	88550874	.	AT	A	5033.28	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=9.764;DP=410;FS=4.797;HRun=8;HaplotypeScore=39.8609;InbreedingCoeff=0.9767;MQ=82.98;MQ0=0;MQRankSum=-2.858;QD=25.42;ReadPosRankSum=0.189;VQSLOD=5.1979;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:51.08:492,51,0	0/0:4,0:4:12.04:0,12,145	0/0:17,0:16:39.07:0,39,434	0/0:9,0:9:12.04:0,12,144	1/1:1,15:16:45.07:433,45,0	1/1:1,17:18:39.06:377,39,0	1/1:0,7:7:21.03:203,21,0	1/1:4,32:36:96.14:922,96,0	0/0:11,0:10:33.10:0,33,398	0/0:7,0:7:18.06:0,18,217	0/0:8,0:8:24.06:0,24,278	1/1:0,8:8:24.04:232,24,0	0/0:12,0:12:30.09:0,30,362	1/1:1,11:12:33.05:319,33,0	0/0:9,0:9:27.08:0,27,325	0/0:13,0:13:27.08:0,27,326	0/0:21,0:21:57.17:0,57,688	1/1:1,22:23:60.10:579,60,0	0/0:15,0:15:33.10:0,33,391	0/0:30,0:30:78.24:0,78,942	1/1:2,8:10:24.04:232,24,0	1/1:1,12:13:33.05:319,33,0	0/0:9,0:10:26.95:0,27,302	0/0:17,0:17:48.14:0,48,574	0/0:10,0:10:7.27:0,7,303	1/1:1,12:13:36.06:348,36,0	0/0:19,0:19:54.15:0,54,640	1/1:0,21:21:60.10:579,60,0
chr10	88551543	.	AGCC	A	12462.22	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=15.155;DP=706;FS=0.000;HRun=0;HaplotypeScore=113.6684;InbreedingCoeff=0.9976;MQ=91.22;MQ0=0;MQRankSum=-5.268;QD=41.13;ReadPosRankSum=4.568;VQSLOD=6.0006;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,138,3099	0/0:11,0:11:33.10:0,33,715	0/0:26,0:26:68.83:0,69,1401	0/0:33,0:33:93.32:0,93,2013	0/0:20,0:20:57.18:0,57,1248	0/0:24,0:24:69.24:0,69,1566	0/0:27,0:27:78.27:0,78,1768	1/1:3,23:26:69.21:1148,69,0	0/0:31,0:31:87.30:0,87,1972	0/0:30,0:30:87.29:0,87,1938	0/0:15,0:15:45.14:0,45,990	0/0:29,0:29:87.20:0,87,1903	1/1:0,17:17:48.16:818,48,0	0/0:30,0:30:90.29:0,90,1978	1/1:1,39:40:99:1790,105,0	1/1:0,24:24:60.21:1022,60,0	0/0:39,0:39:99:0,117,2606	0/0:17,0:17:51.18:0,51,1175	1/1:0,19:19:54.17:870,54,0	1/1:0,21:21:48.16:818,48,0	1/1:2,23:25:39.13:665,39,0	0/0:22,0:22:60.19:0,60,1292	1/1:0,11:11:17.56:306,18,0	1/1:1,19:20:45.15:767,45,0	1/1:0,22:22:54.18:920,54,0	1/1:1,32:33:18.26:1344,18,0	1/1:0,31:31:78.27:1329,78,0	1/1:1,13:14:39.13:665,39,0
chr10	88552302	.	A	AG	9597.29	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-15.876;DP=513;FS=7.140;HRun=1;HaplotypeScore=48.3169;InbreedingCoeff=0.9621;MQ=75.82;MQ0=0;MQRankSum=-1.857;QD=36.35;ReadPosRankSum=0.927;VQSLOD=4.5250;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.14:0,48,607	0/0:12,0:12:30.08:0,30,362	0/0:17,0:17:33.43:0,33,426	0/0:9,0:9:23.09:0,23,259	0/0:19,0:19:54.12:0,54,655	0/0:21,0:21:60.18:0,60,762	0/0:10,0:10:27.06:0,27,310	1/1:1,21:22:63.09:756,63,0	0/0:10,0:10:30.06:0,30,348	0/0:23,0:23:69.19:0,69,841	0/0:18,0:18:54.13:0,54,667	0/0:18,0:18:54.15:0,54,673	1/1:1,13:14:32.90:474,33,0	0/0:16,0:16:45.15:0,45,583	1/1:1,20:21:57.19:819,57,0	1/1:0,14:14:33.11:475,33,0	0/0:21,0:21:63.19:0,63,800	0/0:23,0:23:54.15:0,54,682	1/1:0,23:23:68.94:853,69,0	1/1:0,28:28:84.24:1184,84,0	1/1:1,20:21:57.19:809,57,0	0/0:15,0:15:42.10:0,42,502	1/1:1,27:28:75.25:1074,75,0	1/1:0,8:8:15.05:216,15,0	1/1:2,20:22:57.19:820,57,0	1/1:1,12:13:0.25:479,0,0	1/1:0,31:31:78.26:1122,78,0	1/1:3,16:19:36.12:518,36,0
chr10	88552381	.	A	AAG	7192.46	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-13.927;DP=491;FS=8.765;HRun=0;HaplotypeScore=56.0298;InbreedingCoeff=0.9992;MQ=88.30;MQ0=0;MQRankSum=-1.135;QD=50.65;ReadPosRankSum=2.658;VQSLOD=5.6741;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:30:78.27:1461,78,0	0/0:11,0:11:30.10:0,30,436	0/0:20,0:20:51.16:0,51,718	0/0:16,0:16:42.14:0,42,611	1/1:1,12:13:33.11:618,33,0	1/1:1,20:21:60.21:1124,60,0	1/1:0,10:10:30.10:562,30,0	0/0:27,0:27:72.23:0,72,1041	0/0:16,0:16:48.16:0,48,706	0/0:30,0:30:87.29:0,87,1277	0/0:15,0:15:45.14:0,45,643	1/1:0,17:17:45.15:843,45,0	0/0:12,0:12:26.82:0,27,397	1/1:0,20:20:54.19:1011,54,0	0/0:10,0:10:30.09:0,30,423	0/0:19,0:19:48.16:0,48,707	0/0:14,0:14:42.11:0,42,596	1/1:0,19:19:51.17:955,51,0	0/0:24,0:24:66.20:0,66,942	0/0:23,0:23:60.20:0,60,876	0/0:16,0:16:45.13:0,45,639	1/1:0,12:12:33.11:618,33,0	0/0:17,0:17:45.15:0,45,661	0/0:12,0:12:27.09:0,27,398	0/0:15,0:15:42.14:0,42,619	0/0:11,0:11:33.11:0,33,485	0/0:18,0:17:42.14:0,42,617	0/0:23,0:23:60.18:0,60,845
chr10	88552554	.	C	CT	8655.47	PASS	AB=0.526;AC=25;AF=0.446;AN=56;BaseQRankSum=-7.988;DP=576;FS=0.659;HRun=6;HaplotypeScore=58.6123;InbreedingCoeff=0.9561;MQ=79.68;MQ0=0;MQRankSum=-2.238;QD=31.94;ReadPosRankSum=0.479;VQSLOD=5.1212;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,135,1363	0/0:7,0:7:21.05:0,21,214	0/0:13,0:13:29.84:0,30,285	0/0:17,0:18:41.25:0,41,385	0/0:15,0:15:36.08:0,36,367	0/0:20,0:20:57.10:0,57,573	0/0:16,0:16:48.11:0,48,490	1/1:3,22:25:63.19:778,63,0	0/0:22,0:22:60.13:0,60,612	0/0:29,0:29:87.18:0,87,878	0/0:10,0:10:27.06:0,27,275	0/0:19,0:19:54.12:0,54,551	1/1:3,15:18:39.12:491,39,0	0/0:26,0:26:66.14:0,66,673	1/1:2,15:17:48.15:600,48,0	1/1:1,12:13:36.12:453,36,0	0/0:24,0:24:57.09:0,57,572	0/0:24,0:24:69.11:0,69,693	1/1:2,21:23:63.20:792,63,0	1/1:2,16:18:48.14:590,48,0	1/1:3,19:22:57.18:717,57,0	0/0:7,0:7:21.05:0,21,214	1/1:3,14:17:39.12:490,39,0	1/1:6,26:32:78.25:973,78,0	1/1:0,19:19:51.16:642,51,0	0/1:3,27:30:1.58:916,0,2	1/1:2,22:24:35.60:762,36,0	1/1:1,12:13:36.12:453,36,0
chr10	88553540	.	ATCTGTCTG	A	5536.50	PASS	AB=0.879;AC=22;AF=0.393;AN=56;BaseQRankSum=1.059;DP=564;FS=8.114;HRun=0;HaplotypeScore=172.6559;InbreedingCoeff=0.6153;MQ=70.74;MQ0=5;MQRankSum=-1.552;QD=21.38;ReadPosRankSum=1.810;VQSLOD=3.9168;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:32.73:0,33,1002	0/0:4,0:4:12.03:0,12,225	0/0:24,0:17:41.99:0,42,786	0/0:22,0:18:44.98:0,45,679	0/0:23,0:25:27:0,27,667	0/0:32,0:32:25.94:0,26,293	0/0:1,0:13:3:0,3,25	0/0:37,0:35:2.31:0,2,62	0/0:24,0:24:54.13:0,54,960	0/0:17,0:17:42.14:0,42,893	0/0:19,0:18:27.09:0,27,436	0/0:18,0:18:8.38:0,8,48	1/1:14,3:17:39.11:685,39,0	0/0:21,0:21:11.55:0,12,98	1/1:21,0:21:21.05:398,21,0	1/1:15,1:19:33.59:463,34,0	0/1:12,0:12:11.02:11,0,552	0/0:13,0:13:10.39:0,10,593	1/1:17,0:17:37.91:521,38,0	1/1:29,0:29:24.07:461,24,0	0/1:15,0:15:99:349,0,377	0/0:12,0:12:0.32:0,0,19	0/1:1,15:16:0:1,0,0	1/1:3,8:11:0.17:0,0,0	1/1:12,8:20:51.17:1087,51,0	1/1:3,0:20:44.57:596,45,0	1/1:31,0:31:15.02:253,15,0	0/1:31,0:31:99:713,0,422
chr10	88553544	.	GTCTGTCTGTCTA	G	5492.30	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=-0.613;DP=549;FS=7.988;HRun=0;HaplotypeScore=205.5097;InbreedingCoeff=0.4536;MQ=70.10;MQ0=6;MQRankSum=-1.286;QD=21.62;ReadPosRankSum=1.089;VQSLOD=3.1801;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:16.48:0,16,1437	0/0:4,0:4:12.03:0,12,249	0/0:24,0:17:41.99:0,42,786	0/0:21,0:17:45:0,45,680	0/0:24,0:24:33.04:0,33,1188	0/0:31,0:31:40.15:0,40,543	0/0:13,0:13:3:0,3,25	0/0:36,0:34:2.31:0,2,62	0/0:23,0:23:57.08:0,57,1128	0/0:15,0:15:42.14:0,42,1038	0/0:18,0:17:27.09:0,27,436	0/0:17,0:17:8.91:0,9,149	1/1:17,0:17:38.77:486,39,0	0/0:21,0:21:15.04:0,15,258	1/1:0,16:17:21.07:719,21,0	0/1:19,0:19:99:296,0,260	0/1:11,0:11:12.35:12,0,681	0/0:13,0:13:19.17:0,19,891	1/1:3,14:17:42.10:615,42,0	1/1:2,27:29:24.08:828,24,0	0/1:17,0:17:99:326,0,563	0/0:10,0:10:0.34:0,0,44	0/1:17,0:16:0:1,0,0	1/1:10,0:10:0.39:1,0,0	1/1:19,1:20:49.55:638,50,0	0/1:20,0:20:99:471,0,184	1/1:3,25:29:15.03:418,15,0	0/1:31,0:31:99:681,0,720
chr10	88553548	.	G	GTCTATCTA	1428.64	PASS	AB=1.000;AC=26;AF=0.481;AN=54;BaseQRankSum=1.089;DP=538;FS=13.019;HRun=0;HaplotypeScore=183.9391;InbreedingCoeff=0.0659;MQ=65.59;MQ0=9;MQRankSum=-2.050;QD=3.74;ReadPosRankSum=-4.968;VQSLOD=0.2595;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:4.53:5,0,466	0/0:5,0:5:9.03:0,9,147	0/0:20,0:13:36.07:0,36,560	0/0:19,0:15:34.51:0,35,416	0/1:22,0:22:42.41:42,0,345	1/1:26,5:31:24.93:483,25,0	0/0:13,0:13:2.99:0,3,24	0/1:37,0:34:12.80:114,0,13	0/1:23,0:23:40.16:40,0,675	0/1:17,0:16:99:110,0,574	0/0:22,0:21:27.07:0,27,408	1/1:5,12:19:5.37:239,5,0	0/1:16,0:16:11.02:50,0,11	1/1:7,11:22:5.46:239,5,0	1/1:17,0:17:9.52:39,10,0	0/1:17,0:17:5.27:5,0,256	0/1:11,0:11:23.25:23,0,225	0/0:13,0:13:4.47:0,4,320	1/1:16,0:15:10.94:65,11,0	1/1:28,0:28:6.56:18,7,0	0/0:17,0:17:18.07:0,18,275	1/1:10,0:10:3.79:27,4,0	./.	0/1:9,0:9:0.37:1,0,0	0/1:19,0:19:73.86:74,0,108	0/1:18,0:18:9.11:9,0,209	0/1:26,0:26:10.52:11,0,76	0/0:31,0:31:6.43:0,6,360
chr10	88553552	.	G	GTCTATCTA	1838.57	PASS	AB=1.000;AC=25;AF=0.543;AN=46;BaseQRankSum=-2.738;DP=545;FS=16.699;HRun=0;HaplotypeScore=191.1856;InbreedingCoeff=0.6055;MQ=61.45;MQ0=11;MQRankSum=-2.864;QD=6.61;ReadPosRankSum=-3.680;VQSLOD=0.9065;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:13.34:0,13,538	./.	./.	./.	0/0:23,0:23:20.42:0,20,340	1/1:32,0:32:23.11:443,23,0	0/0:15,0:15:6:0,6,73	1/1:40,0:37:3.63:10,4,0	1/1:24,0:24:14.83:229,15,0	1/1:13,5:20:21:388,21,0	./.	1/1:16,0:16:8.98:266,9,0	0/1:15,0:15:13.55:14,0,17	1/1:15,0:15:9.01:264,9,0	1/1:17,0:17:10.67:38,11,0	0/0:17,0:17:17.82:0,18,206	1/1:13,0:13:19.93:233,20,0	0/0:12,0:12:5.59:0,6,260	1/1:19,0:16:2.95:24,3,0	1/1:28,0:28:11.12:45,11,0	0/0:17,0:17:20.86:0,21,195	1/1:10,0:10:2.99:24,3,0	./.	0/1:9,0:9:0.37:0,0,0	0/0:20,0:20:15.60:0,16,142	0/1:19,0:19:31.93:32,0,154	0/0:26,0:26:3.19:0,3,76	0/0:28,0:28:29.98:0,30,287
chr10	88553630	.	C	CT	969.51	PASS	AB=0.734;AC=8;AF=0.148;AN=54;BaseQRankSum=8.242;DP=432;FS=4.917;HRun=1;HaplotypeScore=107.7008;InbreedingCoeff=0.0880;MQ=59.59;MQ0=6;MQRankSum=-7.594;QD=8.50;ReadPosRankSum=3.398;VQSLOD=1.3273;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,1:18:40.90:0,41,623	0/0:5,0:5:12.04:0,12,165	0/0:20,0:15:32.91:0,33,405	0/0:9,0:5:9.03:0,9,126	0/0:23,0:23:66.22:0,66,923	0/0:18,0:18:45.15:0,45,629	0/0:13,0:13:38.92:0,39,517	0/0:29,0:29:87.28:0,87,1196	0/0:11,0:11:8.03:0,8,356	0/0:20,0:19:57.19:0,57,798	0/0:21,0:21:60.11:0,60,790	0/0:7,0:7:21.07:0,21,294	0/1:5,6:11:46.16:119,0,46	0/0:10,0:10:27.09:0,27,378	1/1:15,4:16:12.04:175,12,0	0/1:8,4:12:99:113,0,108	0/0:17,0:19:51.64:0,52,713	0/0:25,0:25:67.45:0,67,901	0/1:5,2:7:65.95:66,0,187	0/1:19,10:28:95.06:240,0,95	0/0:7,0:7:21.07:0,21,294	0/0:8,0:8:24.08:0,24,336	0/1:8,6:14:38.95:240,0,39	./.	0/0:15,0:15:33.10:0,33,405	0/0:17,0:17:51.17:0,51,710	0/1:16,6:20:99:154,0,102	0/0:20,0:20:57.19:0,57,787
chr10	88553633	.	CTATT	C	1246.39	PASS	AB=0.994;AC=14;AF=0.259;AN=54;BaseQRankSum=6.005;DP=436;FS=1.159;HRun=0;HaplotypeScore=125.0334;InbreedingCoeff=0.3260;MQ=60.87;MQ0=6;MQRankSum=-5.826;QD=6.53;ReadPosRankSum=1.278;VQSLOD=2.7936;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:45.90:0,46,1173	0/0:5,0:5:9.03:0,9,243	0/0:23,0:16:33.55:0,34,594	0/0:9,0:5:9.98:0,10,64	0/0:25,0:25:72.20:0,72,1582	0/0:18,0:18:51.13:0,51,1274	0/0:13,0:13:39.04:0,39,745	0/1:28,0:28:99:170,0,677	0/0:12,0:12:32.99:0,33,706	0/0:22,0:21:60.15:0,60,1222	0/0:22,0:22:60.08:0,60,1421	0/0:7,0:7:21.06:0,21,508	0/1:11,0:11:2.27:40,0,2	0/0:10,0:10:27.09:0,27,658	1/1:17,0:14:11.49:66,11,0	0/1:12,0:12:38.10:70,0,38	0/0:20,0:20:57.51:0,58,1166	0/0:24,0:24:54.57:0,55,1526	0/1:8,0:8:53.37:66,0,53	0/1:29,0:28:2.39:101,0,2	0/0:7,0:7:21.04:0,21,311	0/0:8,0:8:24.08:0,24,595	1/1:14,0:14:20.52:150,21,0	./.	1/1:2,12:14:33.11:626,33,0	0/1:17,0:17:8.82:9,0,531	0/1:21,0:19:7.07:70,0,7	0/1:19,1:20:46.64:47,0,728
chr10	88554330	.	CCAAA	C	18493.82	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=19.173;DP=735;FS=2.290;HRun=0;HaplotypeScore=139.7779;InbreedingCoeff=0.9998;MQ=80.64;MQ0=0;MQRankSum=-6.307;QD=50.81;ReadPosRankSum=1.751;VQSLOD=5.8210;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,154,4134	0/0:14,0:14:42.14:0,42,1151	0/0:21,0:21:54.18:0,54,1347	0/0:21,0:21:56:0,56,1322	0/0:25,0:25:69.24:0,69,1889	0/0:21,0:21:60.19:0,60,1587	0/0:17,0:17:51.16:0,51,1307	1/1:3,27:30:78.23:1478,78,0	0/0:25,0:25:72.21:0,72,1802	0/0:33,0:33:99:0,99,2704	0/0:19,0:19:54.19:0,54,1466	0/0:34,0:34:99:0,102,2713	1/1:1,36:37:96.33:1860,96,0	0/0:20,0:20:57.20:0,57,1551	1/1:0,47:47:99:2267,117,0	1/1:1,29:30:81.28:1570,81,0	0/0:31,0:31:93.32:0,93,2548	0/0:18,0:18:54.19:0,54,1479	1/1:4,9:13:27.07:488,27,0	1/1:1,23:24:66.23:1279,66,0	1/1:1,27:28:69.24:1337,69,0	0/0:20,0:20:57.19:0,57,1505	1/1:1,20:21:57.20:1105,57,0	1/1:0,34:34:96.33:1857,96,0	1/1:1,33:34:99:1919,99,0	1/1:3,18:21:54.16:1011,54,0	1/1:2,30:32:84.29:1628,84,0	1/1:1,12:13:36.12:696,36,0
chr10	88554912	.	C	CAACTCTCTTGTGTAT	27469.37	PASS	AB=0.519;AC=25;AF=0.446;AN=56;BaseQRankSum=-13.652;DP=505;FS=0.000;HRun=0;HaplotypeScore=173.5446;InbreedingCoeff=0.9072;MQ=79.58;MQ0=0;MQRankSum=-13.597;QD=140.87;ReadPosRankSum=0.391;VQSLOD=4.5744;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,4226	0/0:10,0:10:30.10:0,30,1394	0/0:16,0:16:39.03:0,39,1148	0/0:14,0:14:36.07:0,36,1218	0/0:30,0:30:87.30:0,87,3804	0/0:18,0:18:48.13:0,48,1994	0/0:21,0:21:63.19:0,63,2527	1/1:0,1:28:84.21:4047,84,0	0/0:21,0:21:63.19:0,63,2704	0/0:23,0:23:69.23:0,69,2864	0/0:30,0:30:87.27:0,87,3600	0/0:17,0:17:51.14:0,51,2131	1/1:0,8:11:24.08:1831,24,0	0/0:20,0:20:57.20:0,57,2498	1/1:0,9:18:27.09:2059,27,0	1/1:0,9:15:30.10:2284,30,0	0/0:24,0:24:72.20:0,72,3122	0/0:17,0:17:48.10:0,48,2000	1/1:0,6:10:30.09:1944,30,0	1/1:1,14:26:48.09:3244,48,0	1/1:0,7:10:21.07:1537,21,0	0/0:15,0:15:45.11:0,45,1814	1/1:0,8:20:24.55:1831,25,0	1/1:0,3:5:6.02:457,6,0	1/1:0,11:14:33.11:2518,33,0	0/1:1,6:14:97.64:2528,0,98	1/1:0,8:19:30.10:2275,30,0	1/1:0,4:5:12.04:917,12,0
chr10	88555162	.	CGTGT	C	2672.38	PASS	AB=0.760;AC=34;AF=0.607;AN=56;BaseQRankSum=4.009;DP=555;FS=7.059;HRun=0;HaplotypeScore=124.1943;InbreedingCoeff=0.3595;MQ=64.91;MQ0=9;MQRankSum=-2.837;QD=6.46;ReadPosRankSum=3.063;VQSLOD=2.1144;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,19:39:39.12:594,39,0	0/1:1,1:10:25.25:25,0,64	0/0:20,0:10:3.01:0,3,41	0/0:30,0:21:3.01:0,3,40	0/0:9,0:9:14.70:0,15,248	0/0:24,0:27:47.33:0,47,749	0/1:21,4:25:56.83:57,0,387	1/1:44,0:46:12.44:103,12,0	0/1:10,1:15:32.92:33,0,136	0/1:14,0:16:54.56:55,0,86	0/1:13,1:14:68.80:69,0,70	0/0:13,0:13:15.04:0,15,274	1/1:9,11:20:24.08:369,24,0	0/0:20,0:19:12.02:0,12,211	1/1:15,5:21:6.02:95,6,0	1/1:10,5:15:9.50:143,10,0	0/1:20,3:39:77.29:109,0,77	0/0:20,0:20:27.07:0,27,528	1/1:20,5:25:18.01:284,18,0	1/1:5,5:10:6:95,6,0	1/1:20,0:23:3:28,3,0	0/0:2,0:2:5.91:0,6,88	1/1:11,3:14:12.01:144,12,0	1/1:13,14:28:12.03:190,12,0	1/1:7,3:10:12.03:168,12,0	1/1:13,0:14:3:28,3,0	1/1:9,5:15:15.04:216,15,0	1/1:6,0:8:6.01:56,6,0
chr10	88555224	.	C	CGT	1838.09	PASS	AB=0.535;AC=9;AF=0.161;AN=56;BaseQRankSum=4.508;DP=640;FS=6.565;HRun=0;HaplotypeScore=130.2946;InbreedingCoeff=0.8530;MQ=54.46;MQ0=34;MQRankSum=-4.863;QD=20.65;ReadPosRankSum=-0.329;VQSLOD=3.3797;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:93.32:0,93,1477	0/0:8,0:8:21.04:0,21,306	0/0:78,0:9:24.03:0,24,325	0/0:81,0:10:11.76:0,12,294	0/0:19,0:19:57.19:0,57,921	0/0:25,0:25:75.26:0,75,1223	0/0:32,0:32:81.24:0,81,1264	1/1:11,14:25:13.85:493,14,0	0/0:14,0:14:36.12:0,36,584	0/0:10,0:10:21.96:0,22,343	0/0:18,0:18:51.17:0,51,791	0/0:14,0:14:39.13:0,39,609	0/0:22,0:22:35.30:0,35,239	0/0:10,0:10:27.09:0,27,437	0/0:13,0:13:23.54:0,24,152	0/0:14,0:14:26.92:0,27,172	0/0:32,0:32:74.93:0,75,1155	0/0:25,0:24:72.24:0,72,1143	0/0:15,0:16:27.01:0,27,151	0/0:14,0:14:26.86:0,27,205	1/1:6,17:24:23.83:373,24,0	0/0:6,0:6:18.06:0,18,293	0/0:10,0:10:4.49:0,4,77	0/0:30,0:30:32.51:0,33,232	1/1:2,9:11:18.06:283,18,0	0/1:3,19:23:2.17:752,0,2	0/0:16,0:16:41.71:0,42,315	1/1:3,3:6:8.92:95,9,0
chr10	88555329	.	ATATTTTATTT	A	1112.08	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.101;DP=481;FS=5.115;HRun=0;HaplotypeScore=152.1257;InbreedingCoeff=0.6301;MQ=79.76;MQ0=2;MQRankSum=-5.413;QD=38.35;ReadPosRankSum=0.392;VQSLOD=3.2079;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,20:29:45.15:1206,45,0	0/0:14,0:14:21.07:0,21,878	0/0:17,0:14:6.02:0,6,95	0/0:24,0:17:16.66:0,17,500	0/0:24,0:24:42.13:0,42,1881	0/0:24,0:24:51.16:0,51,2350	0/0:9,0:9:15.05:0,15,694	0/0:29,0:29:60.21:0,60,2539	0/0:7,0:7:9.03:0,9,457	0/0:20,0:20:42.14:0,42,1778	0/0:15,0:15:27.07:0,27,1117	0/0:14,0:14:36.12:0,36,1499	0/0:14,0:14:24.08:0,24,978	0/0:8,0:8:15.05:0,15,714	0/0:8,0:8:12.04:0,12,496	0/0:11,0:11:21.07:0,21,973	0/0:22,0:22:60.21:0,60,2825	0/0:14,0:14:33.11:0,33,1475	0/0:29,0:29:78.22:0,78,3245	0/0:18,0:18:36.12:0,36,1675	0/0:6,0:6:6.02:0,6,305	0/0:7,0:7:3.01:0,3,61	0/0:10,0:10:12.04:0,12,424	0/0:11,0:11:20.97:0,21,948	0/0:17,0:17:42.14:0,42,1955	0/0:21,0:21:45.15:0,45,2035	0/0:12,0:12:33.11:0,33,1503	0/0:47,0:47:99:0,117,5112
chr10	88556387	.	ATT	A	6135.39	PASS	AB=0.947;AC=25;AF=0.446;AN=56;BaseQRankSum=-2.483;DP=562;FS=26.148;HRun=11;HaplotypeScore=90.4258;InbreedingCoeff=0.9266;MQ=79.63;MQ0=1;MQRankSum=-0.159;QD=24.06;ReadPosRankSum=2.525;VQSLOD=2.6813;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:26:72.06:0,72,729	0/0:9,0:9:21.07:0,21,320	0/0:28,0:27:1.33:0,1,516	0/1:16,0:17:1.42:1,0,137	0/0:9,0:15:39.09:0,39,436	0/0:1,0:14:36.06:0,36,345	0/0:5,0:18:36.06:0,36,375	1/1:10,10:20:30.02:319,30,0	0/0:25,0:26:71.71:0,72,1030	0/0:33,0:34:86.77:0,87,1282	0/0:21,0:21:63.21:0,63,963	0/0:7,0:16:39.03:0,39,377	1/1:4,13:17:42.06:447,42,0	0/0:3,0:17:39.07:0,39,379	1/1:2,18:20:51.12:543,51,0	1/1:0,27:27:72.17:766,72,0	0/0:20,0:23:61.67:0,62,856	0/0:6,0:28:66.08:0,66,639	1/1:4,22:27:57.03:650,57,0	1/1:0,19:19:51.10:543,51,0	1/1:2,16:17:39.09:415,39,0	0/0:3,0:16:45.03:0,45,435	1/1:1,16:17:45.11:479,45,0	1/1:1,16:17:39.09:415,39,0	0/0:4,0:14:30.06:0,30,325	1/1:2,18:20:54.13:575,54,0	1/1:5,17:22:54.09:567,54,0	1/1:1,12:13:39.10:415,39,0
chr10	88556483	.	T	TGAGGCGTAATTAA	63932.58	PASS	AB=0.743;AC=41;AF=0.732;AN=56;BaseQRankSum=-1.358;DP=642;FS=11.717;HRun=0;HaplotypeScore=212.9590;InbreedingCoeff=0.9085;MQ=79.73;MQ0=1;MQRankSum=-17.815;QD=137.79;ReadPosRankSum=-1.559;VQSLOD=3.9371;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,12:20:54.19:2941,54,0	0/0:9,0:9:27.09:0,27,984	0/0:25,0:25:69.15:0,69,2268	0/0:24,0:24:44.66:0,45,1664	1/1:16,16:33:81.28:4338,81,0	1/1:9,7:17:48.16:2645,48,0	1/1:11,11:26:57.20:3226,57,0	1/1:29,2:36:99:4860,102,0	0/0:32,0:32:96.31:0,96,3446	0/0:35,0:35:99:0,102,3839	0/0:19,0:19:57.20:0,57,2232	1/1:7,10:19:51.14:2954,51,0	1/1:16,9:25:63.18:3129,63,0	1/1:2,10:14:33.11:2142,33,0	1/1:12,11:23:60.21:3281,60,0	1/1:13,12:25:57.20:3283,57,0	0/0:34,0:34:99:0,102,4014	1/1:10,7:17:42.08:2141,42,0	1/1:13,4:17:41.80:2062,42,0	1/1:14,14:31:93.28:4438,93,0	1/1:10,2:14:39.13:1853,39,0	1/1:12,11:24:72.25:4149,72,0	1/1:14,7:25:60.16:3115,60,0	1/1:7,6:16:33.11:2009,33,0	1/1:6,5:12:30.10:1551,30,0	0/1:17,9:26:99:3125,0,180	1/1:13,16:32:84.29:4833,84,0	1/1:2,9:11:30.10:1855,30,0
chr10	88556968	.	A	AT	17581.60	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=4.895;DP=543;FS=1.217;HRun=0;HaplotypeScore=92.4006;InbreedingCoeff=0.9953;MQ=86.04;MQ0=0;MQRankSum=-5.467;QD=43.30;ReadPosRankSum=1.538;VQSLOD=5.1300;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:40:99:1676,105,0	0/0:10,0:10:27.05:0,27,355	0/0:22,0:22:44.44:0,44,799	0/0:30,0:29:72.22:0,72,1042	1/1:0,10:10:30.10:479,30,0	1/1:0,20:20:57.19:910,57,0	1/1:2,38:40:99:1677,105,0	1/1:0,27:27:81.28:1292,81,0	0/0:10,0:10:30.10:0,30,419	0/0:13,0:13:36.12:0,36,503	0/0:14,0:14:42.14:0,42,587	1/1:0,22:22:66.23:1053,66,0	1/1:0,16:16:48.16:766,48,0	1/1:0,22:22:57.19:909,57,0	1/1:0,8:8:18.06:287,18,0	1/1:1,13:14:35.63:575,36,0	0/0:38,0:38:99:0,111,1532	1/1:0,24:24:69.19:1075,69,0	1/1:0,19:19:57.19:903,57,0	1/1:0,15:15:36.12:574,36,0	1/1:1,38:39:99:1629,102,0	1/1:0,7:7:18.06:288,18,0	1/1:0,9:9:24.08:383,24,0	1/1:0,26:26:59.71:958,60,0	1/1:0,13:13:39.13:622,39,0	1/1:1,15:17:48.16:758,48,0	1/1:0,10:10:27.09:431,27,0	1/1:0,8:8:21.07:335,21,0
chr10	88557612	.	A	ATC	8692.65	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-7.172;DP=473;FS=3.316;HRun=0;HaplotypeScore=76.2082;InbreedingCoeff=0.9891;MQ=74.94;MQ0=0;MQRankSum=-2.076;QD=42.82;ReadPosRankSum=-0.181;VQSLOD=5.9171;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:57.18:0,57,786	0/0:9,0:9:24.08:0,24,343	0/0:15,0:15:39.12:0,39,540	0/0:15,0:15:43.70:0,44,601	0/0:15,0:15:42.14:0,42,595	0/0:18,0:18:44.58:0,45,643	0/0:17,0:17:45.15:0,45,636	1/1:2,28:32:87.27:1524,87,0	0/0:17,0:17:48.16:0,48,670	0/0:30,0:30:81.22:0,81,1116	0/0:10,0:10:30.10:0,30,413	0/0:21,0:21:57.19:0,57,811	1/1:1,19:21:42.62:769,43,0	0/0:20,0:20:50.71:0,51,722	1/1:1,16:16:33.11:603,33,0	1/1:0,11:11:24.08:439,24,0	0/0:13,0:13:33.11:0,33,473	0/0:14,0:14:42.14:0,42,594	1/1:3,19:22:63.16:1088,63,0	1/1:2,12:14:36.59:660,37,0	1/1:1,15:16:33.11:605,33,0	0/0:17,0:17:48.12:0,48,644	1/1:0,9:9:21.07:384,21,0	1/1:2,19:19:42.14:769,42,0	0/0:15,0:15:38.85:0,39,557	1/1:2,19:21:17.21:994,17,0	1/1:1,14:15:39.13:694,39,0	1/1:0,3:3:9.03:165,9,0
chr10	88558597	.	TG	T	19809.86	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=14.424;DP=823;FS=6.087;HRun=5;HaplotypeScore=156.3475;InbreedingCoeff=0.9990;MQ=76.63;MQ0=2;MQRankSum=-5.998;QD=30.57;ReadPosRankSum=1.565;VQSLOD=2.7492;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:44:99:1359,120,0	0/0:18,0:18:54.18:0,54,739	0/0:19,0:17:32.44:0,32,517	0/0:28,0:26:52.48:0,52,833	1/1:0,46:46:99:1484,132,0	1/1:2,26:28:71.34:814,71,0	1/1:0,31:31:84.24:952,84,0	1/1:2,31:32:84.23:944,84,0	0/0:22,0:22:63.17:0,63,841	0/0:42,0:42:99:0,126,1691	0/0:21,0:21:60.20:0,60,819	1/1:1,26:27:78.22:884,78,0	1/1:3,25:28:66.19:748,66,0	1/1:2,37:39:99:1258,111,0	1/1:2,35:37:99:1156,102,0	1/1:0,30:30:87.25:986,87,0	0/0:24,0:24:69.23:0,69,942	1/1:1,9:10:20.34:236,20,0	1/1:3,12:15:36.03:381,36,0	1/1:0,33:33:99:1122,99,0	1/1:1,44:45:99:1360,120,0	1/1:2,33:35:93.23:1034,93,0	1/1:3,26:29:69.20:782,69,0	1/1:2,20:22:54.15:612,54,0	1/1:0,29:29:84.24:952,84,0	1/1:1,31:32:93.25:1045,93,0	1/1:2,31:33:87.25:984,87,0	1/1:0,22:22:63.18:714,63,0
chr10	88558896	.	TCC	T	7790.89	PASS	AB=0.600;AC=27;AF=0.482;AN=56;BaseQRankSum=2.942;DP=573;FS=2.097;HRun=11;HaplotypeScore=138.0169;InbreedingCoeff=0.9073;MQ=70.46;MQ0=0;MQRankSum=-2.827;QD=23.05;ReadPosRankSum=5.067;VQSLOD=3.5008;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,35:39:90.20:958,90,0	0/0:11,0:11:15.04:0,15,207	0/0:16,0:18:37.58:0,38,342	0/0:11,0:11:12.02:0,12,126	0/1:4,1:12:11.17:11,0,50	0/0:6,0:30:50.16:0,50,188	0/0:5,0:23:53.14:0,53,232	1/1:5,22:27:60.10:634,60,0	0/0:18,0:18:45.11:0,45,625	0/0:13,0:13:6.01:0,6,73	0/0:8,0:8:12.03:0,12,164	0/0:6,0:24:50.41:0,50,188	1/1:3,20:23:50.69:542,51,0	0/0:2,0:17:36.18:0,36,124	1/1:3,30:33:81.12:862,81,0	1/1:3,22:25:66.11:702,66,0	0/0:16,0:17:47.62:0,48,656	0/0:0,0:10:22.46:0,22,77	1/1:5,14:19:42.07:447,42,0	1/1:2,16:18:39.05:415,39,0	1/1:9,31:40:81.54:863,82,0	0/0:9,0:20:27.17:0,27,94	1/1:4,14:18:33.04:350,33,0	1/1:3,24:27:51.12:543,51,0	0/0:5,0:15:20.54:0,21,82	1/1:2,17:19:51.12:543,51,0	1/1:5,22:26:57.04:603,57,0	1/1:1,10:11:30.07:319,30,0
chr10	88559080	.	C	CG	16763.96	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-7.808;DP=598;FS=7.484;HRun=3;HaplotypeScore=66.2711;InbreedingCoeff=0.9982;MQ=91.07;MQ0=0;MQRankSum=-7.377;QD=36.76;ReadPosRankSum=2.317;VQSLOD=5.3767;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,43:45:99:1551,108,0	0/0:9,0:9:27.04:0,27,316	0/0:26,0:26:57.10:0,57,656	0/0:26,0:26:67.87:0,68,783	1/1:1,12:13:30.10:432,30,0	1/1:1,23:24:66.22:948,66,0	1/1:3,24:27:72.20:1010,72,0	1/1:4,20:24:57.16:778,57,0	0/0:16,0:16:45.14:0,45,558	0/0:22,0:22:60.19:0,60,742	0/0:8,0:8:24.07:0,24,295	1/1:0,16:16:48.16:678,48,0	1/1:0,7:7:21.07:301,21,0	1/1:1,16:17:45.15:632,45,0	1/1:1,25:26:72.24:1035,72,0	1/1:1,15:16:45.15:647,45,0	0/0:35,0:35:99:0,102,1260	1/1:0,15:15:42.14:592,42,0	1/1:0,25:26:78.18:1067,78,0	1/1:1,19:20:51.17:733,51,0	1/1:4,24:28:63.21:906,63,0	1/1:0,23:23:57.19:820,57,0	1/1:0,10:11:24.08:346,24,0	1/1:2,35:37:81.27:1152,81,0	1/1:0,18:18:51.17:733,51,0	1/1:1,25:26:41.06:1030,41,0	1/1:1,22:22:60.20:856,60,0	1/1:0,14:14:36.12:518,36,0
chr10	88559162	.	C	CTCTCTT	3779.71	PASS	AB=0.945;AC=22;AF=0.393;AN=56;BaseQRankSum=-2.440;DP=517;FS=1.454;HRun=0;HaplotypeScore=171.4129;InbreedingCoeff=0.5189;MQ=57.25;MQ0=24;MQRankSum=-1.286;QD=14.82;ReadPosRankSum=-0.437;VQSLOD=3.1709;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:27:24.82:0,25,209	0/0:12,0:10:23.98:0,24,204	0/0:16,0:6:5.92:0,6,56	0/0:32,0:19:21.19:0,21,147	0/0:22,0:20:17.48:0,17,209	0/0:20,0:20:6.38:0,6,44	0/0:23,0:22:17.06:0,17,143	0/1:27,0:25:23.20:273,0,23	0/0:14,0:14:32.99:0,33,367	0/0:18,0:17:42.34:0,42,408	0/0:16,0:16:44.08:0,44,390	0/0:10,0:10:4.77:0,5,36	0/1:6,2:8:43.64:90,0,44	0/0:9,0:8:10.71:0,11,85	1/1:16,4:18:14.49:341,14,0	1/1:8,0:8:11.80:97,12,0	0/0:22,0:22:39.74:0,40,322	0/1:13,0:13:0.21:0,0,306	1/1:22,1:19:24.03:334,24,0	1/1:19,2:20:43.35:680,43,0	1/1:16,0:15:15.40:117,15,0	0/0:17,0:17:12.56:0,13,96	1/1:16,3:18:33.09:363,33,0	1/1:19,1:19:23.61:174,24,0	0/1:22,0:20:33.82:34,0,68	0/1:29,0:27:59.72:530,0,60	0/1:16,1:15:17.83:154,0,18	1/1:9,1:10:28.89:594,29,0
chr10	88559164	.	C	CTCTT	3076.97	PASS	AB=0.987;AC=21;AF=0.375;AN=56;BaseQRankSum=-1.617;DP=511;FS=3.371;HRun=0;HaplotypeScore=154.6160;InbreedingCoeff=0.5575;MQ=55.94;MQ0=25;MQRankSum=-1.248;QD=12.82;ReadPosRankSum=-0.374;VQSLOD=2.8784;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:26:21.63:0,22,149	0/0:12,0:10:23.30:0,23,176	0/0:16,0:6:5.98:0,6,56	0/0:31,0:18:20.55:0,21,145	0/0:22,0:20:18.51:0,19,158	0/0:20,0:20:4.63:0,5,31	0/0:23,0:22:19.26:0,19,125	0/1:28,0:25:68.43:261,0,68	0/0:15,0:15:32.86:0,33,333	0/0:18,0:17:42.32:0,42,381	0/0:17,0:17:35.55:0,36,319	0/0:9,0:9:11.65:0,12,45	0/1:8,0:8:48.84:70,0,49	0/0:9,0:8:10.80:0,11,64	1/1:20,1:19:14.16:288,14,0	1/1:8,0:8:11.96:97,12,0	0/0:22,0:22:33.44:0,33,277	0/0:12,0:12:12.17:0,12,228	1/1:22,0:18:24.68:303,25,0	1/1:20,0:19:43.35:595,43,0	1/1:15,0:14:15.40:116,15,0	0/0:15,0:15:12.56:0,13,81	1/1:19,0:18:33.01:339,33,0	1/1:19,1:19:23.68:175,24,0	0/1:23,0:19:17.45:17,0,82	0/1:27,2:27:92.42:403,0,92	0/1:17,0:15:36.68:151,0,37	1/1:10,0:10:28.89:465,29,0
chr10	88559242	.	C	CGTTTGTGT	5936.68	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=8.688;DP=513;FS=6.220;HRun=0;HaplotypeScore=203.8240;InbreedingCoeff=0.8291;MQ=47.97;MQ0=13;MQRankSum=-9.663;QD=14.69;ReadPosRankSum=-9.728;VQSLOD=0.7738;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:34.67:292,35,0	0/0:11,0:11:28.81:0,29,309	0/0:11,0:6:6.01:0,6,62	0/0:15,0:4:6.76:0,7,38	1/1:17,0:16:26.55:271,27,0	1/1:17,0:17:25.03:218,25,0	1/1:30,0:30:48.26:358,48,0	1/1:18,0:16:44.47:439,44,0	0/0:17,0:18:38.75:0,39,396	0/0:23,0:23:59.34:0,59,701	0/1:20,0:22:0.13:0,0,518	1/1:0,19:21:4.26:137,4,0	1/1:15,0:14:27.23:315,27,0	1/1:11,0:10:17.95:174,18,0	1/1:20,0:19:23.30:148,23,0	1/1:6,0:15:14.88:124,15,0	0/0:29,0:30:63.16:0,63,1103	1/1:14,0:14:23.95:264,24,0	1/1:21,0:20:46.25:382,46,0	1/1:23,0:23:45.12:375,45,0	1/1:19,0:17:17.64:134,18,0	1/1:4,9:18:0.94:1,1,0	1/1:11,0:11:23.88:213,24,0	1/1:16,0:17:3.95:83,4,0	1/1:15,4:18:43.73:830,44,0	1/1:14,0:14:32.01:349,32,0	1/1:21,0:22:56.53:566,57,0	1/1:11,0:10:29.39:265,29,0
chr10	88559401	.	T	TG	20810.32	PASS	AB=0.519;AC=41;AF=0.732;AN=56;BaseQRankSum=-2.934;DP=657;FS=1.527;HRun=0;HaplotypeScore=80.6380;InbreedingCoeff=0.9481;MQ=76.43;MQ0=0;MQRankSum=-8.341;QD=41.45;ReadPosRankSum=1.362;VQSLOD=5.5051;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,47:47:99:2053,129,0	0/0:12,0:12:36.08:0,36,481	0/0:16,0:16:45.15:0,45,628	0/0:26,0:26:68.57:0,69,947	1/1:1,20:21:51.17:809,51,0	1/1:0,17:17:42.14:667,42,0	1/1:1,34:35:84.29:1339,84,0	1/1:0,19:19:54.14:827,54,0	0/0:25,0:25:72.19:0,72,969	0/0:29,0:29:87.28:0,87,1185	0/0:19,0:19:57.19:0,57,797	1/1:0,25:26:69.23:1073,69,0	1/1:0,20:20:45.15:715,45,0	1/1:0,17:17:48.16:765,48,0	1/1:0,27:26:72.25:1145,72,0	1/1:0,26:26:63.21:1006,63,0	0/0:28,0:28:81.24:0,81,1111	1/1:0,9:9:24.08:384,24,0	1/1:2,18:20:51.17:811,51,0	1/1:0,26:26:72.25:1150,72,0	1/1:1,48:49:99:2109,132,0	1/1:0,23:23:63.21:1001,63,0	1/1:0,15:15:35.79:574,36,0	1/1:2,22:24:54.18:858,54,0	1/1:0,22:21:57.19:910,57,0	0/1:2,25:27:0.96:1083,0,1	1/1:0,17:17:51.17:812,51,0	1/1:0,15:15:45.15:719,45,0
chr10	88559656	.	C	CTTTG	16852.10	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=9.574;DP=620;FS=7.246;HRun=0;HaplotypeScore=319.6052;InbreedingCoeff=0.9659;MQ=69.29;MQ0=0;MQRankSum=-14.248;QD=35.33;ReadPosRankSum=-0.164;VQSLOD=3.5896;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:12.50:222,12,0	0/0:10,0:10:30.10:0,30,551	0/0:21,0:21:42.59:0,43,742	0/0:16,0:16:45.13:0,45,795	1/1:39,0:39:21.85:407,22,0	1/1:22,0:22:22.82:357,23,0	1/1:14,0:14:15.01:294,15,0	1/1:20,11:28:42.14:1052,42,0	0/0:29,0:29:72.23:0,72,1294	0/0:21,0:21:57.20:0,57,1037	0/0:21,0:21:57.20:0,57,1045	1/1:16,0:16:14.54:380,15,0	1/1:11,15:26:66.23:1619,66,0	1/1:24,0:24:16.52:434,17,0	1/1:14,7:21:39.09:939,39,0	1/1:12,12:24:45.15:1117,45,0	0/0:25,0:25:72.25:0,72,1303	1/1:8,0:8:6.02:135,6,0	1/1:11,8:19:30.09:752,30,0	1/1:9,12:21:39.06:886,39,0	1/1:5,8:12:21.03:471,21,0	1/1:33,0:33:38.10:781,38,0	1/1:7,12:19:48.16:1225,48,0	1/1:5,14:19:39.09:966,39,0	1/1:26,0:26:26.65:610,27,0	1/1:12,21:33:66.23:1700,66,0	1/1:8,20:28:66.23:1703,66,0	1/1:5,12:17:35.95:800,36,0
chr10	88559739	.	TCTC	T	2126.10	PASS	AB=0.816;AC=21;AF=0.375;AN=56;BaseQRankSum=5.887;DP=430;FS=20.921;HRun=0;HaplotypeScore=121.9131;InbreedingCoeff=-0.4960;MQ=47.02;MQ0=49;MQRankSum=-5.000;QD=7.38;ReadPosRankSum=3.389;VQSLOD=1.0172;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:3,2:5:43.39:81,0,43	0/0:7,0:7:21.07:0,21,435	0/0:43,0:4:11.96:0,12,152	0/1:52,0:8:40.29:40,0,129	1/1:4,3:7:2.97:20,3,0	0/1:2,1:3:39.81:40,0,54	0/1:5,0:5:12.88:13,0,171	0/0:12,0:5:12.04:0,12,243	0/0:27,0:27:72.23:0,72,1496	0/0:16,0:16:48.16:0,48,1005	0/0:18,0:18:48.15:0,48,979	0/1:10,0:10:99:137,0,156	0/1:11,5:16:99:167,0,473	0/1:4,3:7:49.18:95,0,49	0/1:16,6:22:99:248,0,185	0/1:16,4:20:99:137,0,693	0/1:26,2:28:45.29:45,0,1333	0/1:7,0:7:47.55:48,0,102	0/0:8,0:4:9.03:0,9,174	0/1:4,5:9:99:208,0,161	0/1:14,4:17:74.79:75,0,238	0/1:3,1:4:36.98:37,0,109	0/1:11,4:15:99:153,0,400	0/1:11,8:19:99:277,0,339	0/0:9,0:9:10.20:0,10,192	0/1:7,5:12:99:199,0,314	0/1:9,4:13:99:126,0,404	0/1:12,4:16:99:140,0,660
chr10	88559771	.	T	TCTC	1121.39	PASS	AB=0.826;AC=10;AF=0.179;AN=56;BaseQRankSum=5.880;DP=507;FS=3.529;HRun=0;HaplotypeScore=141.6910;InbreedingCoeff=0.2538;MQ=48.96;MQ0=38;MQRankSum=-5.776;QD=13.68;ReadPosRankSum=-5.156;VQSLOD=2.4596;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:6,1:7:9.28:92,9,0	0/0:8,0:8:24.08:0,24,371	0/0:40,0:5:11.99:0,12,138	0/0:63,0:12:16.51:0,17,327	1/1:2,4:6:13.22:302,13,0	0/1:6,1:7:6.70:164,0,7	0/1:6,0:6:7.95:8,0,93	0/0:29,0:13:39.12:0,39,586	0/0:25,0:25:66.22:0,66,1014	0/0:23,0:23:66.22:0,66,1021	0/0:18,0:18:42.14:0,42,650	0/0:5,0:5:5.94:0,6,22	0/0:20,0:20:51.17:0,51,810	0/1:3,2:5:22.52:119,0,23	0/0:17,0:17:27.09:0,27,418	0/0:18,0:18:48.16:0,48,763	0/1:28,1:30:14.91:15,0,696	0/0:7,0:7:5.52:0,6,36	0/0:13,0:8:24.04:0,24,344	0/0:15,0:15:36.11:0,36,541	0/0:26,0:25:48.04:0,48,704	0/1:3,6:9:29.55:353,0,30	0/0:20,0:20:44.84:0,45,666	0/0:20,0:20:35.92:0,36,538	0/1:9,3:12:99:217,0,196	0/0:19,0:19:51.17:0,51,797	0/0:19,0:19:48.16:0,48,745	0/0:19,0:19:50.75:0,51,773
chr10	88559811	.	TCTC	T	15981.09	PASS	AB=0.560;AC=41;AF=0.732;AN=56;BaseQRankSum=8.833;DP=627;FS=2.318;HRun=0;HaplotypeScore=116.6311;InbreedingCoeff=0.8979;MQ=50.49;MQ0=35;MQRankSum=-2.547;QD=40.15;ReadPosRankSum=1.238;VQSLOD=6.2502;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:15:36.59:592,37,0	0/0:6,0:6:18.06:0,18,403	0/0:53,0:11:14.50:0,14,398	0/0:84,0:21:38.12:0,38,682	1/1:14,0:14:42.01:621,42,0	1/1:15,0:15:32.39:630,32,0	1/1:18,0:18:51.17:825,51,0	1/1:11,10:15:39.12:583,39,0	0/0:17,0:17:48.16:0,48,1037	0/0:25,0:24:72.24:0,72,1492	0/0:16,0:16:45.13:0,45,933	1/1:10,0:10:21.07:338,21,0	1/1:8,22:30:90.29:1426,90,0	1/1:6,0:6:15.05:249,15,0	1/1:1,22:23:45.15:748,45,0	1/1:9,17:26:72.25:1182,72,0	0/0:25,0:25:69.14:0,69,1468	1/1:11,0:11:21.31:374,21,0	1/1:4,8:11:14.93:339,15,0	1/1:4,12:15:42.14:682,42,0	1/1:1,27:27:54.14:868,54,0	1/1:17,0:17:45.15:720,45,0	1/1:4,26:30:69.19:1117,69,0	1/1:11,12:23:66.22:1061,66,0	1/1:0,14:14:39.13:649,39,0	0/1:6,22:28:23.17:1191,0,23	1/1:4,20:24:66.18:1029,66,0	1/1:5,12:17:48.16:758,48,0
chr10	88559813	.	TCC	T	4378.12	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=11.603;DP=629;FS=0.775;HRun=2;HaplotypeScore=146.8950;InbreedingCoeff=0.7783;MQ=50.70;MQ0=36;MQRankSum=-2.999;QD=10.97;ReadPosRankSum=3.723;VQSLOD=1.9924;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:5.85:92,6,0	0/0:6,0:6:18.06:0,18,365	0/0:53,0:13:20.26:0,20,331	0/0:83,0:20:27.75:0,28,587	1/1:0,13:13:35.21:352,35,0	1/1:2,13:15:32.42:350,32,0	1/1:4,16:20:52.24:501,52,0	1/1:19,0:14:10.46:77,10,0	0/0:16,0:16:48.16:0,48,945	0/0:26,0:25:75.19:0,75,1408	0/0:16,0:16:48.15:0,48,918	1/1:4,6:10:23.47:202,23,0	1/1:30,0:30:59.06:269,59,0	1/1:1,5:6:15.02:149,15,0	1/1:23,0:23:18.28:139,18,0	1/1:26,0:26:40.66:223,41,0	0/0:26,0:27:70.34:0,70,1380	1/1:5,6:11:5.77:203,6,0	0/1:14,0:13:46.01:48,0,46	1/1:17,0:16:25.66:126,26,0	1/1:27,0:26:33.09:171,33,0	1/1:2,15:17:44.73:408,45,0	1/1:30,0:30:25.01:201,25,0	1/1:23,0:23:54.19:216,54,0	1/1:14,0:14:34.82:143,35,0	0/1:29,0:29:49.34:191,0,49	1/1:23,0:23:36.10:183,36,0	1/1:17,0:17:28.90:135,29,0
chr10	88559816	.	TC	T	1700.82	PASS	AB=0.906;AC=22;AF=0.393;AN=56;BaseQRankSum=10.150;DP=626;FS=4.658;HRun=2;HaplotypeScore=141.8274;InbreedingCoeff=0.5711;MQ=48.83;MQ0=34;MQRankSum=-2.635;QD=7.66;ReadPosRankSum=7.402;VQSLOD=0.9733;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:0.81:1,0,23	0/0:6,0:6:18.06:0,18,287	0/0:50,2:11:23.33:0,23,315	0/0:81,0:19:19.78:0,20,480	1/1:1,13:14:39.12:297,39,0	1/1:1,13:15:38.58:278,39,0	1/1:4,16:20:52.54:402,53,0	0/0:19,0:14:7.59:0,8,76	0/0:16,0:16:48.16:0,48,767	0/0:25,0:24:72.25:0,72,1150	0/0:16,0:16:48.13:0,48,704	1/1:4,6:10:26.79:197,27,0	0/0:31,0:31:3.81:0,4,76	1/1:0,5:5:14.92:114,15,0	1/1:22,0:22:6.41:14,6,0	0/0:27,0:27:0.37:0,0,59	0/0:27,0:27:44.65:0,45,1080	0/1:4,6:10:9.80:155,0,10	0/0:13,0:12:3.11:0,3,63	0/0:17,0:16:1.23:0,1,24	0/1:28,0:27:4.82:6,0,5	1/1:3,15:18:50.28:375,50,0	1/1:28,0:28:11.37:29,11,0	0/0:24,0:24:1.02:0,1,21	1/1:14,0:14:6.13:13,6,0	0/0:30,0:30:4.88:0,5,157	0/1:23,0:23:1.79:2,0,15	0/0:17,0:17:3.68:0,4,22
chr10	88561554	.	T	TC	1607.26	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.623;DP=242;FS=5.155;HRun=5;HaplotypeScore=46.0332;InbreedingCoeff=0.8102;MQ=60.05;MQ0=0;MQRankSum=1.741;QD=30.91;ReadPosRankSum=-3.642;VQSLOD=2.4331;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:33.02:0,33,339	0/0:4,0:4:12.03:0,12,129	0/0:7,0:6:11.14:0,11,161	0/0:1,0:1:2.84:0,3,14	0/0:10,0:10:20.92:0,21,211	0/0:14,0:14:39.08:0,39,410	0/0:3,0:3:9.02:0,9,96	1/1:0,22:22:60.15:769,60,0	0/0:11,0:11:30.07:0,30,320	0/0:13,0:13:33.08:0,33,354	0/0:9,0:9:18:0,18,175	0/0:9,0:9:24.06:0,24,257	0/0:5,0:5:15.04:0,15,161	0/0:8,0:8:24.01:0,24,239	0/0:12,0:11:30.07:0,30,322	0/0:5,0:5:15.04:0,15,161	0/0:5,0:5:9.02:0,9,96	0/0:2,0:2:3.01:0,3,32	0/0:9,0:9:24.06:0,24,258	0/0:12,0:12:30.08:0,30,321	1/1:0,8:8:18.06:236,18,0	0/0:6,0:6:18.05:0,18,193	0/0:8,0:8:24.06:0,24,256	0/0:3,0:3:3.48:0,3,33	0/0:7,0:7:18.04:0,18,193	1/1:1,15:16:41.72:522,42,0	0/0:14,0:14:33.08:0,33,354	1/1:0,6:6:18.06:237,18,0
chr10	88561956	.	A	AT	3526.02	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.842;DP=571;FS=26.299;HRun=3;HaplotypeScore=78.8247;InbreedingCoeff=0.9708;MQ=81.85;MQ0=0;MQRankSum=-7.254;QD=34.57;ReadPosRankSum=-3.423;VQSLOD=0.9757;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1224	0/0:8,0:8:24.05:0,24,274	0/0:16,0:16:7.29:0,7,398	0/0:22,0:22:36.40:0,36,522	0/0:22,0:22:57.17:0,57,683	0/0:19,0:19:57.17:0,57,684	0/0:17,0:17:48.15:0,48,573	1/1:8,22:30:73.79:994,74,0	0/0:30,0:30:84.26:0,84,1007	0/0:25,0:25:63.18:0,63,747	0/0:16,0:16:48.15:0,48,576	0/0:23,0:23:63.19:0,63,756	0/0:27,0:27:78.24:0,78,935	0/0:22,0:22:63.18:0,63,744	0/0:21,0:21:60.18:0,60,720	0/0:19,0:19:51.15:0,51,612	0/0:27,0:27:75.20:0,75,885	0/0:7,0:7:18.06:0,18,216	0/0:25,0:25:66.20:0,66,787	0/0:16,0:16:42.13:0,42,503	1/1:8,16:24:60.12:767,60,0	0/0:5,0:5:12.04:0,12,144	0/0:13,0:13:39.12:0,39,468	0/0:27,0:27:72.22:0,72,864	1/1:3,10:13:33.09:442,33,0	1/1:5,22:26:75.25:1029,75,0	0/0:27,0:27:81.25:0,81,969	1/1:0,7:7:21.07:294,21,0
chr10	88561977	.	AG	A	2770.23	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.020;DP=569;FS=20.714;HRun=2;HaplotypeScore=76.9952;InbreedingCoeff=0.9720;MQ=81.04;MQ0=0;MQRankSum=-9.467;QD=30.11;ReadPosRankSum=-1.508;VQSLOD=1.7254;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.29:0,96,1389	0/0:7,0:7:18.06:0,18,270	0/0:26,0:26:78.24:0,78,1088	0/0:17,0:17:39.13:0,39,553	0/0:21,0:21:60.20:0,60,894	0/0:19,0:19:54.18:0,54,809	0/0:15,0:15:45.12:0,45,633	1/1:2,23:25:69.21:883,69,0	0/0:31,0:31:93.30:0,93,1375	0/0:22,0:22:63.21:0,63,939	0/0:20,0:20:57.18:0,57,809	0/0:24,0:24:72.24:0,72,1073	0/0:32,0:32:93.30:0,93,1368	0/0:20,0:20:60.20:0,60,899	0/0:24,0:24:72.22:0,72,1030	0/0:22,0:22:63.21:0,63,944	0/0:22,0:22:66.22:0,66,989	0/0:7,0:7:21.07:0,21,315	0/0:24,0:24:69.22:0,69,1015	0/0:19,0:19:54.18:0,54,807	1/1:0,21:20:42.14:544,42,0	0/0:2,0:2:6.02:0,6,90	0/0:10,0:10:27.03:0,27,355	0/0:28,0:28:84.27:0,84,1238	1/1:0,13:13:30.10:389,30,0	1/1:1,23:23:66.21:856,66,0	0/0:31,0:31:93.31:0,93,1388	1/1:0,9:9:21.07:273,21,0
chr10	88562073	.	C	CA	3948.39	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.881;DP=610;FS=1.860;HRun=3;HaplotypeScore=65.4121;InbreedingCoeff=0.9999;MQ=83.67;MQ0=0;MQRankSum=-0.466;QD=37.97;ReadPosRankSum=-2.345;VQSLOD=3.1948;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1316	0/0:12,0:12:36.11:0,36,432	0/0:20,0:20:54.09:0,54,613	0/0:23,0:23:60:0,60,701	0/0:35,0:35:99:0,102,1222	0/0:18,0:18:54.15:0,54,636	0/0:21,0:21:63.19:0,63,754	1/1:1,19:20:57.17:765,57,0	0/0:23,0:23:63.19:0,63,756	0/0:28,0:28:84.26:0,84,1008	0/0:21,0:21:51.15:0,51,612	0/0:23,0:23:60.18:0,60,719	0/0:25,0:25:72.20:0,72,852	0/0:24,0:24:69.21:0,69,828	0/0:20,0:20:60.17:0,60,708	0/0:25,0:25:72.22:0,72,864	0/0:14,0:14:42.10:0,42,490	0/0:14,0:14:39.11:0,39,467	0/0:18,0:18:48.13:0,48,562	0/0:26,0:26:78.24:0,78,934	1/1:4,14:18:45.13:597,45,0	0/0:17,0:17:48.13:0,48,563	0/0:18,0:18:48.13:0,48,564	0/0:26,0:26:72.22:0,72,863	1/1:1,13:14:39.13:546,39,0	1/1:1,37:38:99:1453,105,0	0/0:17,0:16:42.13:0,42,504	1/1:0,14:14:42.14:588,42,0
chr10	88562188	.	GT	G	3875.18	PASS	AB=0.882;AC=18;AF=0.321;AN=56;BaseQRankSum=4.305;DP=564;FS=4.269;HRun=10;HaplotypeScore=87.4972;InbreedingCoeff=0.8272;MQ=64.72;MQ0=2;MQRankSum=0.298;QD=20.61;ReadPosRankSum=4.218;VQSLOD=4.3925;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,3:30:23.08:0,23,703	0/1:6,1:7:7.99:8,0,148	0/0:15,0:15:27:0,27,268	0/0:1,0:1:3.01:0,3,33	0/0:29,0:29:75.19:0,75,822	0/0:22,0:21:42.11:0,42,457	0/0:9,0:9:24.06:0,24,265	0/0:9,0:30:62.78:0,63,336	0/0:24,0:24:69.15:0,69,750	0/0:30,0:31:81.05:0,81,877	0/0:25,0:25:60.16:0,60,664	0/0:23,1:23:22.02:0,22,450	1/1:2,18:21:56.02:475,56,0	0/0:23,0:23:16.23:0,16,393	1/1:2,15:17:41.99:365,42,0	1/1:3,17:20:56.98:495,57,0	0/0:20,0:21:56.66:0,57,611	0/0:13,0:13:21.02:0,21,220	1/1:3,14:17:44.99:391,45,0	1/1:3,27:30:80.97:703,81,0	0/0:4,0:16:28.41:0,28,142	0/1:7,1:8:7.94:8,0,139	1/1:2,23:25:62.97:546,63,0	1/1:4,5:9:20.99:182,21,0	0/0:2,0:13:28.66:0,29,153	0/0:6,0:31:74.17:0,74,396	1/1:5,29:34:80.98:703,81,0	0/0:4,0:19:51.39:0,51,280
chr10	88562243	.	C	CAT	8815.38	PASS	AB=0.778;AC=32;AF=0.571;AN=56;BaseQRankSum=-7.742;DP=557;FS=1.239;HRun=0;HaplotypeScore=95.9857;InbreedingCoeff=0.7828;MQ=82.70;MQ0=4;MQRankSum=0.050;QD=26.88;ReadPosRankSum=2.014;VQSLOD=5.8102;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:63.18:0,63,792	0/0:7,0:7:21.04:0,21,254	0/0:20,0:17:1.65:0,2,12	0/1:33,0:26:23.91:24,0,66	1/1:6,24:30:57.20:962,57,0	1/1:3,15:17:27.09:456,27,0	0/1:2,8:10:17.54:283,0,18	0/0:27,0:27:69.21:0,69,865	0/0:20,1:21:6.56:0,7,643	0/0:30,0:30:84.26:0,84,1067	0/0:19,0:19:48.16:0,48,617	1/1:4,17:20:30.10:506,30,0	1/1:3,19:23:60.19:967,60,0	1/1:1,15:16:27.09:456,27,0	1/1:6,5:11:9.03:149,9,0	1/1:4,16:20:39.13:655,39,0	0/0:18,0:18:45.15:0,45,579	1/1:1,13:14:24.08:405,24,0	1/1:9,14:22:39.13:658,39,0	1/1:13,22:34:72.25:1197,72,0	0/0:14,0:13:24.08:0,24,309	1/1:2,5:7:6.02:101,6,0	1/1:8,9:17:39.10:596,39,0	1/1:2,6:8:12.04:202,12,0	1/1:7,0:11:15.47:130,15,0	0/0:27,0:27:78.22:0,78,966	1/1:12,19:30:63.22:1070,63,0	0/0:21,0:21:57.18:0,57,732
chr10	88563079	.	GT	G	2451.02	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.496;DP=605;FS=2.906;HRun=2;HaplotypeScore=63.5249;InbreedingCoeff=0.9941;MQ=71.03;MQ0=0;MQRankSum=-2.019;QD=29.89;ReadPosRankSum=-0.871;VQSLOD=2.9425;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,2020	0/0:13,0:13:39.13:0,39,584	0/0:9,0:9:23.88:0,24,334	0/0:9,0:9:15.02:0,15,201	0/0:23,0:23:66.22:0,66,984	0/0:25,0:25:75.25:0,75,1120	0/0:25,0:25:75.25:0,75,1122	1/1:1,25:26:75.23:958,75,0	0/0:22,0:22:66.21:0,66,964	0/0:33,0:33:99:0,99,1466	0/0:14,0:14:42.13:0,42,608	0/0:28,0:28:81.26:0,81,1194	0/0:19,0:19:57.19:0,57,851	0/0:26,0:26:78.26:0,78,1166	0/0:18,0:18:51.17:0,51,764	0/0:27,0:27:81.26:0,81,1193	0/0:22,0:22:66.22:0,66,989	0/0:20,0:20:60.17:0,60,875	0/0:15,0:15:45.15:0,45,675	0/0:21,0:21:63.20:0,63,924	1/1:0,14:14:39.13:506,39,0	0/0:15,0:15:45.15:0,45,675	0/0:14,0:14:42.14:0,42,625	0/0:26,0:26:78.26:0,78,1169	0/0:18,0:18:54.14:0,54,784	1/1:1,23:24:27.24:836,27,0	0/0:35,0:35:99:0,105,1568	1/1:5,13:18:24.08:311,24,0
chr10	88563228	.	G	GT	2214.09	PASS	AB=0.533;AC=9;AF=0.161;AN=56;BaseQRankSum=-9.955;DP=427;FS=1.845;HRun=5;HaplotypeScore=42.9525;InbreedingCoeff=0.8057;MQ=81.21;MQ0=0;MQRankSum=-0.175;QD=30.33;ReadPosRankSum=-2.802;VQSLOD=2.7950;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.10:0,57,595	0/0:11,0:11:33.08:0,33,355	0/0:10,0:10:23.27:0,23,228	0/0:13,0:13:4.73:0,5,272	0/0:28,0:28:84.21:0,84,902	0/0:25,0:25:72.18:0,72,774	0/0:11,0:11:30.04:0,30,306	1/1:5,32:36:93.26:1201,93,0	0/0:15,0:15:45.11:0,45,484	0/0:14,0:14:33.07:0,33,349	0/0:17,0:17:48.10:0,48,507	0/0:18,0:18:51.08:0,51,529	0/0:8,0:8:18.04:0,18,193	0/0:16,0:16:42.10:0,42,451	0/0:16,0:16:48.12:0,48,513	0/0:12,0:12:27.07:0,27,290	0/0:22,0:22:60.15:0,60,645	0/0:13,0:13:36.05:0,36,374	0/0:17,0:17:42.10:0,42,451	0/0:18,0:18:48.10:0,48,508	1/1:2,5:7:15.05:197,15,0	0/0:20,0:20:57.14:0,57,612	0/0:10,0:10:27.04:0,27,280	0/0:3,0:3:6.01:0,6,64	1/1:1,5:6:15.05:197,15,0	0/1:2,14:16:16.35:503,0,16	0/0:15,0:15:36.08:0,36,386	1/1:0,7:7:21.07:276,21,0
chr10	88563306	.	CAT	C	4423.96	PASS	AB=0.922;AC=32;AF=0.640;AN=50;BaseQRankSum=6.622;DP=325;FS=1.152;HRun=0;HaplotypeScore=63.9409;InbreedingCoeff=0.5462;MQ=74.88;MQ0=1;MQRankSum=0.103;QD=20.39;ReadPosRankSum=0.731;VQSLOD=4.4891;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:13:24.01:0,24,213	0/0:10,0:10:27.09:0,27,442	./.	0/0:15,0:11:8.57:0,9,47	0/1:17,3:20:19.53:270,0,20	1/1:16,2:18:36.05:428,36,0	1/1:3,6:9:12.04:149,12,0	0/1:24,0:24:68.42:93,0,68	0/0:11,0:11:24.08:0,24,393	0/0:21,0:21:60.20:0,60,986	0/0:10,0:10:18.06:0,18,294	1/1:8,7:15:39.12:484,39,0	1/1:6,3:9:17.82:181,18,0	1/1:5,0:5:6.02:74,6,0	1/1:2,3:5:15.03:174,15,0	0/1:7,2:9:31.49:169,0,31	0/0:17,1:18:10.61:0,11,666	1/1:19,1:20:48.12:579,48,0	1/1:7,3:10:24.08:300,24,0	1/1:11,5:17:38.92:425,39,0	./.	1/1:6,1:7:6.02:75,6,0	1/1:5,3:8:18.01:207,18,0	1/1:1,0:1:2.99:24,3,0	./.	0/1:7,0:7:12.11:12,0,46	1/1:19,7:26:66.58:760,67,0	1/1:7,0:7:2.98:21,3,0
chr10	88563320	.	TAC	T	1619.14	PASS	AB=0.969;AC=27;AF=0.540;AN=50;BaseQRankSum=9.806;DP=305;FS=0.000;HRun=0;HaplotypeScore=76.6278;InbreedingCoeff=0.3470;MQ=62.90;MQ0=4;MQRankSum=0.148;QD=8.10;ReadPosRankSum=1.851;VQSLOD=2.7597;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:30.01:0,30,275	0/0:9,0:9:27.08:0,27,481	./.	0/0:10,0:5:8.19:0,8,55	0/1:18,1:19:55.79:56,0,94	0/1:17,0:17:20.60:106,0,21	0/1:9,0:9:25.40:31,0,25	1/1:17,10:25:47.76:451,48,0	0/0:9,0:9:27.06:0,27,453	0/0:25,0:25:75.18:0,75,1248	0/0:8,0:8:18.06:0,18,338	1/1:13,0:13:35.75:158,36,0	1/1:9,0:9:11.83:55,12,0	1/1:3,0:3:5.60:26,6,0	0/1:5,0:5:6.07:35,0,6	0/1:6,0:6:40.95:45,0,41	0/0:16,0:16:34.37:0,34,739	1/1:21,0:21:43.69:199,44,0	0/1:11,0:10:9.89:55,0,10	1/1:13,0:13:32.66:162,33,0	./.	1/1:4,0:4:5.54:25,6,0	1/1:6,0:6:14.77:64,15,0	0/0:1,0:1:0:0,0,0	./.	0/1:4,1:5:41.16:83,0,41	1/1:26,0:26:7.13:187,7,0	1/1:2,4:6:5.97:58,6,0
chr10	88563326	.	TACACAC	T	604.16	PASS	AB=0.900;AC=6;AF=0.125;AN=48;BaseQRankSum=3.800;DP=297;FS=5.912;HRun=0;HaplotypeScore=103.9370;InbreedingCoeff=0.4950;MQ=59.41;MQ0=4;MQRankSum=-6.573;QD=15.49;ReadPosRankSum=-2.746;VQSLOD=2.0759;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:36.12:0,36,986	0/0:9,0:9:27.09:0,27,913	./.	0/0:10,0:4:1.56:0,2,61	0/0:18,0:18:42.11:0,42,866	0/0:19,0:19:43.03:0,43,914	0/0:10,0:10:19.75:0,20,347	1/1:16,7:23:44.88:609,45,0	0/0:9,0:9:27.09:0,27,798	0/0:24,0:24:72.24:0,72,2420	0/0:7,0:7:18.06:0,18,598	0/0:13,0:13:37.36:0,37,745	0/0:8,0:8:18.06:0,18,395	0/0:5,0:5:7.79:0,8,129	0/0:5,0:5:15.02:0,15,331	0/0:6,0:6:18.06:0,18,451	0/0:14,0:14:42.14:0,42,1456	0/0:19,0:19:35.98:0,36,909	0/0:11,0:10:27.05:0,27,691	0/0:14,0:14:32.94:0,33,690	./.	0/1:4,0:4:10.62:11,0,69	0/0:5,0:5:15.04:0,15,337	./.	./.	0/1:3,0:4:45.33:45,0,101	0/0:26,0:26:75.18:0,75,1556	1/1:6,0:6:5.99:62,6,0
chr10	88563332	.	C	CAT	5339.01	PASS	AB=1.000;AC=32;AF=0.640;AN=50;BaseQRankSum=6.978;DP=303;FS=5.174;HRun=0;HaplotypeScore=70.4512;InbreedingCoeff=0.5787;MQ=58.79;MQ0=4;MQRankSum=0.513;QD=26.04;ReadPosRankSum=-1.192;VQSLOD=5.3674;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:33.04:0,33,369	0/0:9,0:9:27.06:0,27,327	1/1:3,0:1:2.04:6,2,0	0/0:9,0:4:1.55:0,2,4	1/1:15,2:17:36.12:563,36,0	1/1:18,2:20:42.13:647,42,0	0/1:8,0:8:14.46:315,0,14	1/1:33,0:31:27.98:183,28,0	0/0:9,0:9:18.06:0,18,225	0/0:24,0:24:69.17:0,69,867	0/0:6,0:6:15.04:0,15,179	0/1:11,0:11:8.44:408,0,8	1/1:6,2:8:15.04:204,15,0	1/1:5,0:5:12.04:194,12,0	1/1:4,1:5:9.03:147,9,0	0/1:6,0:6:23.19:161,0,23	0/0:18,0:18:45.10:0,45,545	1/1:17,2:19:41.85:693,42,0	1/1:12,1:12:21.02:320,21,0	1/1:13,1:14:30.07:401,30,0	./.	1/1:3,1:4:3:25,3,0	1/1:4,0:4:6.02:83,6,0	./.	./.	0/1:3,0:3:0.16:0,0,33	1/1:23,2:25:63.10:942,63,0	1/1:7,0:7:6.86:47,7,0
chr10	88565553	.	C	CT	2296.73	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.517;DP=446;FS=5.610;HRun=5;HaplotypeScore=68.7567;InbreedingCoeff=0.9855;MQ=75.28;MQ0=0;MQRankSum=-6.949;QD=26.40;ReadPosRankSum=0.343;VQSLOD=3.3662;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:87.19:0,87,924	0/0:9,0:9:27.07:0,27,290	0/0:16,0:15:39.08:0,39,415	0/0:15,0:14:23.40:0,23,300	0/0:25,0:25:72.17:0,72,765	0/0:14,0:14:42.11:0,42,451	0/0:12,0:12:27.07:0,27,290	1/1:5,17:22:39.11:496,39,0	0/0:13,0:13:39.08:0,39,410	0/0:19,0:19:45.11:0,45,484	0/0:18,0:18:45.10:0,45,475	0/0:7,0:7:15.04:0,15,161	0/0:18,0:18:48.12:0,48,516	0/0:12,0:12:33.06:0,33,345	0/0:8,0:8:21.05:0,21,226	0/0:9,0:9:27.07:0,27,290	0/0:15,0:15:36.09:0,36,386	0/0:14,0:14:39.10:0,39,419	0/0:23,0:23:57.13:0,57,605	0/0:23,0:23:66.15:0,66,701	1/1:1,4:5:12:138,12,0	0/0:11,0:11:30.08:0,30,322	0/0:18,0:18:51.13:0,51,548	0/0:8,0:8:21.03:0,21,216	1/1:5,21:26:54.18:710,54,0	1/1:3,20:23:57.10:733,57,0	0/0:18,0:18:51.11:0,51,539	1/1:2,9:11:30.10:392,30,0
chr10	88565564	.	CTTTTA	C	2271.94	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.575;DP=406;FS=8.532;HRun=0;HaplotypeScore=94.5848;InbreedingCoeff=0.9240;MQ=74.39;MQ0=0;MQRankSum=-9.867;QD=32.00;ReadPosRankSum=-1.340;VQSLOD=2.6934;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:78.27:0,78,2194	0/0:11,0:11:27.09:0,27,731	0/0:16,0:13:18.02:0,18,356	0/0:19,0:16:19.12:0,19,443	0/0:23,0:23:60.21:0,60,1711	0/0:15,0:15:39.12:0,39,1049	0/0:10,0:10:21.07:0,21,614	1/1:11,5:16:6.02:115,6,0	0/0:13,0:13:33.10:0,33,857	0/0:16,0:16:33.11:0,33,960	0/0:17,0:17:33.08:0,33,835	0/0:5,0:5:12.04:0,12,350	0/0:16,0:16:36.12:0,36,1050	0/0:11,0:11:24.08:0,24,647	0/0:5,0:5:9.03:0,9,263	0/0:10,0:10:21.05:0,21,483	0/0:13,0:13:36.12:0,36,997	0/0:13,0:13:30.10:0,30,834	0/0:19,0:19:45.14:0,45,1175	0/0:24,0:24:60.21:0,60,1717	1/1:1,5:6:9.03:167,9,0	0/0:9,0:9:12.04:0,12,309	0/0:18,0:18:33.11:0,33,827	0/0:6,0:6:15.05:0,15,438	1/1:6,14:20:48.16:898,48,0	1/1:7,12:19:36.10:687,36,0	0/0:15,0:15:33.11:0,33,902	1/1:0,10:10:30.10:570,30,0
chr10	88565599	.	TC	T	1839.43	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=3.199;DP=370;FS=5.698;HRun=8;HaplotypeScore=56.8381;InbreedingCoeff=0.8479;MQ=67.47;MQ0=0;MQRankSum=-0.954;QD=19.78;ReadPosRankSum=-0.399;VQSLOD=3.1724;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:95.17:0,95,669	0/0:6,0:6:15.05:0,15,180	0/0:11,0:8:3.41:0,3,132	0/1:14,0:10:15.75:16,0,144	1/1:3,10:13:33.04:312,33,0	1/1:2,13:15:39.06:376,39,0	1/1:0,11:11:30.05:290,30,0	0/0:23,0:23:42.13:0,42,507	0/0:11,0:11:30.09:0,30,362	0/0:15,0:15:30.09:0,30,359	0/0:11,0:11:21.06:0,21,253	1/1:0,9:9:27.04:261,27,0	0/0:15,0:15:39.11:0,39,459	1/1:1,11:12:33.05:318,33,0	0/0:9,0:9:27.08:0,27,326	0/0:8,0:8:21.06:0,21,254	0/0:19,0:19:48.12:0,48,558	1/1:2,11:13:30.04:289,30,0	0/0:15,0:14:36.07:0,36,405	0/0:18,0:18:39.11:0,39,461	0/0:10,0:10:21.05:0,21,242	1/1:0,6:6:18.03:174,18,0	0/0:14,0:14:33.09:0,33,387	0/0:10,0:10:18.06:0,18,217	0/0:19,0:18:36.09:0,36,420	0/0:10,0:10:27.08:0,27,315	0/0:14,0:14:42.12:0,42,496	0/0:5,0:5:3.01:0,3,36
chr10	88565671	.	GC	G	1625.18	PASS	AB=0.936;AC=13;AF=0.232;AN=56;BaseQRankSum=5.921;DP=403;FS=29.608;HRun=10;HaplotypeScore=63.6270;InbreedingCoeff=0.7513;MQ=65.70;MQ0=1;MQRankSum=-1.437;QD=13.77;ReadPosRankSum=1.463;VQSLOD=1.6940;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,2:41:53.07:0,53,986	0/0:5,0:5:12.03:0,12,133	0/1:9,1:10:11.02:11,0,108	0/0:20,1:20:22.48:0,22,380	0/0:3,0:8:17.49:0,17,113	0/0:6,0:16:34.36:0,34,183	0/0:1,0:9:25.88:0,26,151	1/1:7,16:23:50.97:440,51,0	0/1:8,1:9:2:2,0,200	0/0:12,0:12:21.06:0,21,232	0/0:10,0:10:27.04:0,27,269	0/0:10,0:10:29.59:0,30,219	0/0:8,0:8:21.01:0,21,200	0/0:7,0:10:26.26:0,26,172	0/0:8,0:8:15.04:0,15,166	0/0:16,0:16:45.09:0,45,475	0/0:19,0:20:53.99:0,54,569	0/0:7,0:16:40.47:0,40,243	0/0:9,0:8:21.05:0,21,224	0/0:11,0:11:21.06:0,21,232	1/1:5,24:29:35.53:571,36,0	0/1:8,0:12:2.30:2,0,117	0/0:15,0:15:39.10:0,39,430	0/0:20,0:20:54.11:0,54,584	1/1:4,12:16:32.94:279,33,0	1/1:0,15:15:44.99:390,45,0	0/0:20,0:20:45.07:0,45,475	1/1:0,4:4:12:104,12,0
chr10	88566518	.	CT	C	2618.02	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=3.216;DP=298;FS=2.407;HRun=1;HaplotypeScore=35.7191;InbreedingCoeff=0.8516;MQ=55.53;MQ0=2;MQRankSum=0.476;QD=36.36;ReadPosRankSum=-1.409;VQSLOD=2.9274;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.18:0,54,858	./.	0/0:17,0:9:24.01:0,24,354	0/0:22,0:18:51.14:0,51,734	0/0:8,0:8:18.06:0,18,287	0/0:14,0:14:42.14:0,42,669	0/0:18,0:18:51.16:0,51,790	1/1:0,32:30:90.29:1242,90,0	0/0:6,0:6:15.05:0,15,240	0/0:9,0:9:27.08:0,27,406	0/0:8,0:8:18.06:0,18,287	0/0:5,0:5:12.04:0,12,191	0/0:8,0:8:21.07:0,21,336	0/0:6,0:6:18.06:0,18,287	0/0:4,0:4:12.04:0,12,191	0/0:13,0:13:33.11:0,33,527	0/0:18,0:18:51.17:0,51,809	0/0:20,0:20:60.20:0,60,959	0/0:9,0:8:24.08:0,24,384	0/0:6,0:6:15.05:0,15,239	1/1:0,17:17:48.16:670,48,0	0/0:1,0:1:3.01:0,3,48	0/0:2,0:2:6.02:0,6,96	0/0:5,0:5:12.04:0,12,192	./.	1/1:2,16:18:6.36:645,6,0	0/0:8,0:8:18.06:0,18,288	1/1:0,5:5:15.05:210,15,0
chr10	88566991	.	CAGGCCGAT	C	160.29	PASS	AB=0.925;AC=4;AF=0.080;AN=50;BaseQRankSum=3.698;DP=622;FS=9.688;HRun=0;HaplotypeScore=90.7800;InbreedingCoeff=0.2155;MQ=34.51;MQ0=75;MQRankSum=-2.801;QD=3.82;ReadPosRankSum=-1.855;VQSLOD=0.5692;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:26:30.06:0,30,1082	0/0:7,0:7:18.06:0,18,796	./.	./.	0/0:30,0:26:39.13:0,39,1634	0/0:27,0:21:20.17:0,20,882	0/0:30,0:4:3.01:0,3,132	./.	0/0:26,0:23:29.86:0,30,1326	0/1:24,1:18:36.75:37,0,1727	0/0:13,0:12:11.79:0,12,530	0/0:27,0:18:21.07:0,21,927	0/0:30,0:21:27.56:0,28,1193	0/0:21,0:14:17.98:0,18,795	0/0:28,0:20:23.87:0,24,1015	0/0:24,0:18:15.05:0,15,663	0/0:27,0:22:9.03:0,9,370	0/0:17,0:13:9.03:0,9,326	0/0:20,0:12:30.10:0,30,1328	0/1:14,2:15:99:139,0,1009	0/0:43,0:12:14.84:0,15,663	0/0:23,0:21:17.70:0,18,770	0/0:17,0:15:24.08:0,24,1059	0/0:33,0:23:24.08:0,24,1016	1/1:0,1:1:3.01:85,3,0	0/0:23,0:13:39.13:0,39,1728	0/0:27,0:26:42.52:0,43,1780	0/0:9,0:2:6.02:0,6,266
chr10	88567277	.	TG	T	75.65	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=3.830;DP=532;FS=4.140;HRun=3;HaplotypeScore=43.8561;InbreedingCoeff=0.5761;MQ=43.28;MQ0=105;MQRankSum=-0.551;QD=9.46;ReadPosRankSum=2.155;VQSLOD=1.2942;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:37:78.22:0,78,1084	0/0:2,0:2:6.02:0,6,86	0/0:44,0:1:3.01:0,3,31	0/0:57,0:2:2.97:0,3,43	0/0:11,0:9:21.07:0,21,302	0/0:14,0:11:24.08:0,24,344	0/0:30,0:22:48.16:0,48,685	0/0:18,0:9:26.82:0,27,199	0/0:20,0:19:51.17:0,51,727	0/0:19,0:16:45.14:0,45,629	0/0:12,0:10:18.06:0,18,258	0/0:18,0:17:38.91:0,39,543	0/0:12,0:10:27.09:0,27,389	0/0:17,0:12:24.08:0,24,345	0/0:20,0:19:42.14:0,42,604	0/0:14,0:11:33.11:0,33,474	0/0:24,0:24:57.19:0,57,819	0/0:19,0:18:51.17:0,51,734	0/0:23,0:9:27.09:0,27,389	0/0:13,0:12:30.10:0,30,431	0/0:16,0:14:24.63:0,25,313	0/0:7,0:7:11.89:0,12,152	0/0:8,0:6:8.92:0,9,129	0/0:29,0:27:66.22:0,66,948	1/1:0,8:8:15.04:163,15,0	0/0:6,0:3:6.88:0,7,53	0/0:28,0:28:69.19:0,69,966	./.
chr10	88567468	.	G	GA	760.30	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.868;DP=502;FS=21.301;HRun=10;HaplotypeScore=61.4179;InbreedingCoeff=0.8373;MQ=54.71;MQ0=7;MQRankSum=-7.215;QD=9.62;ReadPosRankSum=0.007;VQSLOD=0.6559;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:28:26.62:0,27,89	0/0:15,0:15:41.92:0,42,340	0/0:14,0:2:2.68:0,3,11	0/0:11,0:3:3.46:0,3,24	0/0:27,1:28:42.95:0,43,559	0/0:12,0:12:32.96:0,33,271	0/0:4,0:4:11.99:0,12,99	1/1:11,0:13:12.41:55,12,0	0/0:17,1:18:18.96:0,19,362	0/0:22,0:22:43.17:0,43,348	0/0:22,0:22:50.92:0,51,418	0/0:12,0:12:32.96:0,33,271	0/0:17,0:17:38.92:0,39,319	0/0:10,0:10:29.97:0,30,246	0/0:25,0:25:71.91:0,72,591	0/0:13,0:13:29.94:0,30,246	0/0:25,0:26:64.91:0,65,518	0/0:15,0:15:35.96:0,36,295	0/0:26,0:26:64.62:0,65,509	0/0:21,1:20:47.86:0,48,386	1/1:5,0:6:2.88:15,3,0	0/0:16,0:15:38.93:0,39,316	0/0:24,0:23:53.92:0,54,443	0/0:11,0:11:23.94:0,24,194	1/1:7,21:27:68.74:673,69,0	1/1:10,0:17:30.54:146,31,0	0/0:29,1:29:56.47:0,56,516	1/1:2,0:3:5.05:27,5,0
chr10	88567492	.	G	GAA	1379.96	PASS	AB=0.785;AC=10;AF=0.179;AN=56;BaseQRankSum=7.976;DP=540;FS=5.159;HRun=9;HaplotypeScore=72.0110;InbreedingCoeff=0.8089;MQ=65.96;MQ0=3;MQRankSum=-4.952;QD=12.32;ReadPosRankSum=-3.383;VQSLOD=0.5685;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:57.13:0,57,605	0/0:16,0:16:45.09:0,45,471	0/0:28,0:14:2.37:0,2,156	0/1:20,0:8:7.32:7,0,76	0/0:28,0:25:63.14:0,63,670	0/0:13,0:13:30.07:0,30,319	0/0:10,0:10:27.05:0,27,279	1/1:12,11:22:56.95:740,57,0	0/0:20,0:20:50.78:0,51,542	0/0:26,0:26:72.16:0,72,764	0/0:22,0:22:51.06:0,51,529	0/0:14,0:14:30.05:0,30,319	0/0:19,0:18:33.13:0,33,492	0/0:10,0:10:30.07:0,30,319	0/0:24,0:24:66.06:0,66,687	0/0:19,0:19:48.07:0,48,495	0/0:24,0:24:62.91:0,63,641	0/0:11,0:11:30.07:0,30,318	0/0:35,0:34:84.12:0,84,875	0/0:18,0:18:42.01:0,42,431	0/1:3,5:7:0:0,0,0	0/0:16,0:16:42.09:0,42,439	0/0:21,0:21:39.04:0,39,468	0/0:7,0:7:21.05:0,21,223	1/1:6,0:23:16.67:134,17,0	1/1:12,9:17:30.50:410,30,0	0/0:22,0:22:54.09:0,54,557	1/1:3,8:11:20.04:248,20,0
chr10	88567978	.	G	GTT	2457.13	PASS	AB=0.577;AC=22;AF=0.393;AN=56;BaseQRankSum=10.435;DP=543;FS=1.637;HRun=10;HaplotypeScore=86.7946;InbreedingCoeff=0.8485;MQ=64.91;MQ0=1;MQRankSum=3.278;QD=10.20;ReadPosRankSum=-0.533;VQSLOD=1.4974;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:48.06:0,48,488	0/0:9,0:10:29.81:0,30,286	0/0:22,0:13:6.85:0,7,136	0/0:13,0:10:17.47:0,17,123	0/0:22,0:22:48.06:0,48,481	0/0:20,0:21:41.79:0,42,479	0/0:12,0:13:26.86:0,27,326	1/1:9,11:23:41.85:519,42,0	0/0:16,0:16:39.06:0,39,396	0/0:22,0:22:41.99:0,42,420	0/0:22,0:22:60.10:0,60,610	0/0:19,0:19:51.07:0,51,511	0/1:8,0:31:2.62:126,0,3	0/0:16,0:17:37.35:0,37,422	0/1:3,0:11:16.06:16,0,20	1/1:1,1:15:35.45:159,35,0	0/0:32,0:32:84.14:0,84,853	0/0:16,0:17:47.83:0,48,469	1/1:1,0:18:38.58:160,39,0	1/1:5,1:28:56.36:252,56,0	1/1:2,6:10:17.03:197,17,0	0/0:15,0:15:29.97:0,30,291	1/1:7,0:26:9.80:100,10,0	1/1:1,0:10:12.48:44,12,0	0/0:21,0:21:36.73:0,37,413	1/1:5,13:24:47.59:606,48,0	1/1:6,1:37:70.83:316,71,0	1/1:2,5:7:12.04:179,12,0
chr10	88568190	.	GAAGAAAGAAAGA	G	9692.50	PASS	AB=0.556;AC=13;AF=0.232;AN=56;BaseQRankSum=9.599;DP=634;FS=4.243;HRun=0;HaplotypeScore=239.9496;InbreedingCoeff=0.8922;MQ=55.70;MQ0=3;MQRankSum=-11.148;QD=62.53;ReadPosRankSum=3.964;VQSLOD=4.2045;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:99:0,99,4683	0/0:15,0:15:45.15:0,45,2401	0/0:17,0:11:19.24:0,19,589	0/0:11,0:8:20.84:0,21,678	1/1:2,26:28:57.13:1645,57,0	1/1:5,11:16:48.16:1563,48,0	1/1:2,29:31:39.13:1444,39,0	0/0:6,0:12:32.96:0,33,603	0/0:28,0:28:84.28:0,84,3605	0/0:19,0:19:57.20:0,57,2602	0/0:18,0:18:51.18:0,51,2412	1/1:8,10:18:51.17:1400,51,0	0/0:23,0:23:69.07:0,69,3408	1/1:0,22:22:51.18:1899,51,0	0/0:26,0:26:75.26:0,75,3397	0/0:26,0:26:78.26:0,78,4198	0/0:32,0:32:93.27:0,93,3663	0/1:4,16:20:46.57:432,0,47	0/0:23,0:21:60.20:0,60,2562	0/0:24,0:24:69.22:0,69,3395	0/0:5,0:5:11.99:0,12,265	1/1:0,20:20:39.13:1310,39,0	0/0:36,0:36:99:0,105,5111	0/0:36,0:36:99:0,102,4807	0/0:4,0:16:45.08:0,45,832	0/0:20,0:26:75.23:0,75,1926	0/0:40,0:40:99:0,120,6174	0/0:11,0:11:32.85:0,33,1054
chr10	88568253	.	GAACA	G	454.83	PASS	AB=0.934;AC=4;AF=0.071;AN=56;BaseQRankSum=3.618;DP=656;FS=0.000;HRun=0;HaplotypeScore=221.7229;InbreedingCoeff=-0.0773;MQ=52.96;MQ0=3;MQRankSum=-6.054;QD=7.22;ReadPosRankSum=0.980;VQSLOD=2.1605;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:84.25:0,84,1895	0/0:13,0:13:39.13:0,39,868	0/0:27,0:13:9.11:0,9,502	0/0:20,0:13:9.12:0,9,530	0/0:32,0:32:81.25:0,81,1439	0/0:23,0:23:66.22:0,66,1501	0/0:22,0:23:39.11:0,39,671	0/1:16,0:15:3.28:3,0,120	0/0:28,1:29:23.37:0,23,1737	0/0:33,0:33:99:0,99,2460	0/0:19,0:19:57.20:0,57,1361	0/0:23,0:23:57.19:0,57,1280	0/0:20,0:20:54.19:0,54,1243	0/0:28,0:28:75.25:0,75,1381	0/0:29,0:29:83.50:0,83,1923	0/0:23,0:23:69.22:0,69,1564	0/0:33,0:33:93.32:0,93,2438	0/0:15,0:15:24.08:0,24,524	0/0:16,0:15:45.11:0,45,822	0/0:24,0:24:72.23:0,72,1505	0/1:10,0:10:34.57:57,0,35	0/0:18,0:18:36.12:0,36,764	0/0:33,0:33:96.33:0,96,2045	0/0:24,1:25:69.71:0,70,1591	0/1:9,5:14:18.73:409,0,19	0/1:23,0:23:87.60:88,0,342	0/0:37,0:36:99:0,108,2344	0/0:16,0:16:1.40:0,1,308
chr10	88568269	.	G	GAAAA	16404.82	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=1.400;DP=619;FS=4.343;HRun=3;HaplotypeScore=167.0190;InbreedingCoeff=0.8665;MQ=52.19;MQ0=2;MQRankSum=0.537;QD=45.70;ReadPosRankSum=-0.521;VQSLOD=2.9195;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:62.23:0,62,869	0/0:9,0:9:24.07:0,24,396	0/0:16,0:4:3.01:0,3,54	0/0:10,0:5:12.01:0,12,183	1/1:31,2:33:71.95:1248,72,0	1/1:20,4:25:56.34:1303,56,0	1/1:11,7:18:47.95:806,48,0	0/0:18,0:17:38.03:0,38,291	0/0:24,0:24:66.02:0,66,995	0/0:33,0:33:90.15:0,90,1412	0/0:19,0:19:45.12:0,45,750	1/1:20,2:22:60.06:1047,60,0	1/1:22,0:22:63.58:1081,64,0	1/1:23,5:28:69.09:1338,69,0	1/1:27,1:28:81.20:1663,81,0	1/1:21,0:21:3.27:893,3,0	0/0:37,0:37:99:0,105,1697	0/1:18,0:18:9.84:501,0,10	1/1:22,1:22:51.34:634,51,0	1/1:20,2:22:63.06:1185,63,0	0/0:8,0:8:11.06:0,11,123	1/1:15,1:16:6.93:662,7,0	1/1:28,0:28:75:1162,75,0	1/1:22,0:22:59.29:1235,59,0	0/0:17,0:17:27.38:0,27,261	0/0:25,0:25:67.37:0,67,800	1/1:32,1:32:90.10:1647,90,0	0/0:13,0:13:36.12:0,36,588
chr10	88568282	.	ACAGG	A	3194.23	PASS	AB=0.895;AC=28;AF=0.500;AN=56;BaseQRankSum=7.691;DP=588;FS=6.894;HRun=0;HaplotypeScore=195.0471;InbreedingCoeff=0.1279;MQ=50.95;MQ0=1;MQRankSum=0.285;QD=7.52;ReadPosRankSum=-5.977;VQSLOD=-0.3110;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:45.85:0,46,837	0/0:7,0:7:21.02:0,21,418	0/0:8,0:1:3:0,3,25	0/0:7,0:3:8.83:0,9,64	1/1:27,0:27:5.92:258,6,0	0/1:25,0:26:46.60:221,0,47	1/1:16,0:17:41.21:314,41,0	1/1:22,0:22:4.08:145,4,0	0/0:23,0:23:68.84:0,69,1201	0/0:30,0:30:86.47:0,86,1348	0/0:18,0:18:53.99:0,54,832	0/1:18,1:20:9.52:161,0,10	0/1:18,4:22:2.08:224,0,2	1/1:24,2:27:37.30:341,37,0	0/1:26,3:29:44.01:233,0,44	1/1:19,0:19:6.45:133,6,0	0/0:39,0:39:99:0,117,2049	0/1:17,3:20:99:131,0,119	0/1:18,1:19:10.12:10,0,187	0/1:18,2:21:18.07:117,0,18	0/1:9,0:9:7.28:7,0,55	1/1:17,0:17:13.75:168,14,0	1/1:18,1:19:27.22:200,27,0	0/1:15,4:19:25.06:34,0,25	1/1:5,0:14:26.85:261,27,0	0/1:19,0:27:97.20:97,0,392	0/1:33,2:34:10.58:314,0,11	0/1:12,0:14:8.15:8,0,364
chr10	88568283	.	CAGGA	C	6066.73	PASS	AB=0.955;AC=31;AF=0.574;AN=54;BaseQRankSum=3.725;DP=594;FS=0.415;HRun=0;HaplotypeScore=187.9036;InbreedingCoeff=0.8789;MQ=50.87;MQ0=1;MQRankSum=4.211;QD=17.38;ReadPosRankSum=-0.378;VQSLOD=4.5374;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:31:30.08:0,30,493	0/0:8,0:8:15.05:0,15,335	0/0:9,0:2:2.60:0,3,10	./.	1/1:22,5:27:50.90:608,51,0	1/1:21,5:26:29.40:468,29,0	1/1:14,3:17:13.54:276,14,0	0/0:25,0:23:42.80:0,43,306	0/0:24,0:24:45.15:0,45,1043	0/0:31,0:31:42.11:0,42,907	0/0:18,0:18:27.09:0,27,604	1/1:16,4:20:23.16:337,23,0	1/1:18,3:21:15.12:385,15,0	1/1:23,4:27:48.01:595,48,0	1/1:24,4:29:35.74:445,36,0	1/1:17,3:20:45.03:509,45,0	0/0:38,0:38:69.24:0,69,1612	0/1:20,1:21:73.34:295,0,73	1/1:19,0:19:13.59:149,14,0	1/1:20,1:21:20.40:248,20,0	0/0:10,0:10:15.36:0,15,184	1/1:13,4:17:33.02:405,33,0	1/1:16,1:17:32.97:371,33,0	1/1:19,0:19:21.35:199,21,0	1/1:14,0:14:11.95:102,12,0	0/0:28,0:28:56.70:0,57,868	1/1:26,8:33:57.43:675,57,0	0/0:15,0:15:36.02:0,36,648
chr10	88568533	.	TG	T	777.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.584;DP=720;FS=0.000;HRun=2;HaplotypeScore=76.4194;InbreedingCoeff=0.9993;MQ=89.08;MQ0=0;MQRankSum=-2.237;QD=29.92;ReadPosRankSum=0.926;VQSLOD=3.2133;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,1972	0/0:10,0:10:30.10:0,30,449	0/0:31,0:30:89.79:0,90,1196	0/0:30,0:30:68.15:0,68,853	0/0:38,0:38:99:0,102,1494	0/0:20,0:20:57.17:0,57,831	0/0:32,0:32:96.24:0,96,1350	0/0:28,0:28:81.25:0,81,1162	0/0:23,0:23:66.20:0,66,952	0/0:28,0:28:78.26:0,78,1152	0/0:13,0:13:39.12:0,39,563	0/0:23,0:23:66.20:0,66,948	0/0:14,0:14:42.13:0,42,608	0/0:25,0:25:75.19:0,75,1094	0/0:28,0:28:81.25:0,81,1175	0/0:23,0:23:69.23:0,69,1032	0/0:41,0:41:99:0,123,1795	0/0:14,0:14:39.13:0,39,578	0/0:21,0:21:63.19:0,63,906	0/0:24,0:24:72.23:0,72,1058	0/0:30,0:30:84.21:0,84,1206	0/0:15,0:15:45.15:0,45,665	0/0:25,0:25:75.24:0,75,1101	0/0:36,0:36:99:0,105,1571	1/1:1,25:26:69.16:873,69,0	0/0:26,0:26:78.20:0,78,1102	0/0:34,0:34:99:0,102,1525	0/0:15,0:15:45.15:0,45,670
chr10	88571332	.	ACTT	A	6890.81	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.571;DP=732;FS=10.583;HRun=0;HaplotypeScore=125.9435;InbreedingCoeff=0.9999;MQ=81.99;MQ0=0;MQRankSum=-5.853;QD=42.80;ReadPosRankSum=1.209;VQSLOD=6.4168;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:50:99:0,151,3486	0/0:12,0:12:36.12:0,36,834	0/0:26,0:26:75.04:0,75,1621	0/0:27,0:27:66.83:0,67,1371	1/1:0,22:22:63.05:979,63,0	1/1:0,18:18:39.09:654,39,0	1/1:1,15:16:42.10:692,42,0	0/0:21,0:21:54.19:0,54,1259	0/0:26,0:26:78.27:0,78,1833	0/0:24,0:24:69.24:0,69,1621	0/0:16,0:16:38.99:0,39,921	1/1:1,34:35:99:1746,99,0	0/0:25,0:25:75.26:0,75,1736	1/1:1,32:33:90.27:1542,90,0	0/0:32,0:32:96.33:0,96,2244	0/0:31,0:31:93.32:0,93,2160	0/0:36,0:36:99:0,108,2493	1/1:3,15:18:36.12:635,36,0	0/0:23,0:23:68.72:0,69,1484	0/0:32,0:32:96.33:0,96,2260	0/0:49,0:49:99:0,144,3327	1/1:1,18:19:42.49:642,42,0	0/0:17,0:17:48.16:0,48,1125	0/0:31,0:30:87.30:0,87,2037	0/0:18,0:18:54.19:0,54,1277	0/0:27,0:27:81.26:0,81,1830	0/0:30,0:30:90.29:0,90,2040	0/0:17,0:17:51.18:0,51,1206
chr10	88572030	.	G	GT	10130.33	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-13.705;DP=552;FS=8.601;HRun=8;HaplotypeScore=46.6014;InbreedingCoeff=0.9668;MQ=63.07;MQ0=3;MQRankSum=0.070;QD=27.09;ReadPosRankSum=0.342;VQSLOD=5.1107;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.04:0,75,686	0/0:10,0:10:27.01:0,27,247	0/0:15,0:9:21.01:0,21,191	0/0:13,0:8:21.16:0,21,176	1/1:1,23:24:66.16:748,66,0	1/1:3,11:14:33.10:381,33,0	1/1:1,11:12:24.07:277,24,0	1/1:4,29:33:68.48:960,68,0	0/0:13,0:13:36.02:0,36,329	0/0:23,1:23:25.41:0,25,487	0/0:21,0:21:57.01:0,57,518	1/1:2,12:15:5.63:319,6,0	1/1:0,18:18:48.14:554,48,0	1/1:1,14:15:33.10:381,33,0	1/1:1,15:16:39.12:450,39,0	1/1:3,11:14:8.64:353,9,0	0/0:33,0:33:93.04:0,93,851	1/1:0,7:7:21.06:242,21,0	1/1:6,19:25:35.70:652,36,0	1/1:4,33:37:65.77:995,66,0	1/1:3,14:17:15.05:423,15,0	1/1:3,17:20:48.10:539,48,0	1/1:7,18:25:20.85:492,21,0	1/1:0,10:10:27.08:312,27,0	0/0:21,0:21:54.03:0,54,494	1/1:4,18:22:29.66:565,30,0	1/1:1,23:24:60.18:692,60,0	1/1:3,23:26:69.21:796,69,0
chr10	88572382	.	T	TTC	1051.78	PASS	AB=0.944;AC=9;AF=0.161;AN=56;BaseQRankSum=8.997;DP=636;FS=0.580;HRun=0;HaplotypeScore=95.7606;InbreedingCoeff=0.8739;MQ=67.37;MQ0=0;MQRankSum=-9.543;QD=13.84;ReadPosRankSum=-1.477;VQSLOD=3.1689;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,2005	0/0:11,0:11:33.11:0,33,485	0/0:22,0:21:46.25:0,46,862	0/0:25,0:24:69.36:0,69,935	0/0:27,0:27:81.26:0,81,1175	0/0:24,0:24:69.23:0,69,1015	0/0:23,0:24:30.45:0,30,954	1/1:12,5:15:29.73:393,30,0	0/0:15,0:15:45.15:0,45,661	0/0:31,0:31:87.26:0,87,1213	0/0:26,0:26:75.25:0,75,1081	0/0:24,0:24:72.23:0,72,1043	0/0:20,0:20:60.20:0,60,884	0/0:27,0:27:78.25:0,78,1128	0/0:15,0:15:45.15:0,45,663	0/0:21,0:21:60.20:0,60,883	0/0:24,1:25:13.60:0,14,834	0/1:16,1:17:6.72:7,0,596	0/0:17,0:17:48.13:0,48,667	0/0:31,0:31:93.29:0,93,1331	1/1:7,3:9:11.71:176,12,0	0/0:23,0:23:69.22:0,69,993	0/0:31,0:31:90.29:0,90,1306	0/0:30,0:30:87.25:0,87,1256	0/0:21,0:21:57.16:0,57,802	1/1:19,3:21:54.42:484,54,0	0/0:23,0:23:69.22:0,69,995	1/1:8,2:10:24.87:152,25,0
chr10	88572383	.	TCAAA	T	1082.82	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.883;DP=631;FS=10.663;HRun=0;HaplotypeScore=119.1671;InbreedingCoeff=0.9702;MQ=67.37;MQ0=0;MQRankSum=-9.764;QD=20.05;ReadPosRankSum=-0.491;VQSLOD=2.4179;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,3912	0/0:11,0:11:33.11:0,33,891	0/0:23,0:21:63.15:0,63,1622	0/0:25,0:24:46.29:0,46,1627	0/0:27,0:27:81.28:0,81,2255	0/0:25,0:25:72.25:0,72,1965	0/0:24,0:24:72.25:0,72,1963	1/1:6,8:12:9.40:104,9,0	0/0:16,0:16:48.16:0,48,1311	0/0:31,0:31:87.29:0,87,2301	0/0:26,0:26:75.26:0,75,2080	0/0:24,0:24:72.25:0,72,2013	0/0:20,0:20:60.21:0,60,1675	0/0:27,0:27:81.28:0,81,2226	0/0:15,0:15:45.15:0,45,1259	0/0:20,0:20:60.21:0,60,1678	0/0:23,0:23:39.46:0,39,1812	0/0:16,1:17:43.59:0,44,1255	0/0:17,0:17:51.17:0,51,1359	0/0:31,0:31:93.29:0,93,2484	1/1:4,4:7:9.86:92,10,0	0/0:23,0:23:69.23:0,69,1825	0/0:31,0:31:90.31:0,90,2507	0/0:30,0:30:87.30:0,87,2433	0/0:20,0:20:60.21:0,60,1677	1/1:7,15:21:43.91:663,44,0	0/0:24,0:24:72.23:0,72,1917	1/1:2,8:10:25.33:375,25,0
chr10	88572392	.	TTC	T	645.24	PASS	AB=0.584;AC=6;AF=0.107;AN=56;BaseQRankSum=8.907;DP=635;FS=7.455;HRun=0;HaplotypeScore=97.6823;InbreedingCoeff=0.6136;MQ=66.64;MQ0=0;MQRankSum=-8.510;QD=13.73;ReadPosRankSum=0.778;VQSLOD=2.5807;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,2707	0/0:10,0:10:30.10:0,30,610	0/0:21,0:20:60.20:0,60,1163	0/0:25,0:23:63.19:0,63,1171	0/0:29,0:29:87.30:0,87,1767	0/0:24,0:24:72.22:0,72,1373	0/0:27,0:27:81.28:0,81,1624	0/1:6,8:10:56.48:56,0,73	0/0:16,0:16:48.16:0,48,973	0/0:28,0:28:81.28:0,81,1641	0/0:26,0:26:72.25:0,72,1450	0/0:25,0:25:75.26:0,75,1512	0/0:20,0:20:60.21:0,60,1192	0/0:24,0:24:72.25:0,72,1463	0/0:16,0:16:48.16:0,48,963	0/0:23,0:23:69.22:0,69,1364	0/0:24,0:24:72.25:0,72,1429	0/0:19,1:20:59.69:0,60,1157	0/0:24,0:24:72.25:0,72,1462	0/0:29,0:29:87.30:0,87,1756	1/1:3,4:6:10.58:69,11,0	0/0:23,0:23:69.24:0,69,1384	0/0:30,0:30:90.30:0,90,1781	0/0:31,0:31:93.31:0,93,1854	0/0:21,0:21:63.22:0,63,1280	0/1:2,15:16:15.13:389,0,15	0/0:26,0:26:78.27:0,78,1579	1/1:1,8:9:25.88:264,26,0
chr10	88573896	.	AGT	A	633.63	PASS	AB=0.917;AC=32;AF=0.615;AN=52;BaseQRankSum=3.299;DP=474;FS=51.061;HRun=0;HaplotypeScore=66.6072;InbreedingCoeff=0.0350;MQ=64.54;MQ0=12;MQRankSum=-0.781;QD=1.89;ReadPosRankSum=3.094;VQSLOD=-0.4917;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:20:2.84:14,3,0	1/1:5,0:5:2.84:14,3,0	./.	./.	1/1:18,2:20:6.02:64,6,0	1/1:16,2:21:12.15:94,12,0	1/1:10,1:10:3.01:32,3,0	0/0:34,0:34:2.84:0,3,14	0/1:12,1:13:23.13:23,0,59	0/1:17,0:16:10.54:11,0,179	0/1:12,0:12:8.11:8,0,38	1/1:6,3:9:8.86:78,9,0	0/0:12,0:12:12.01:0,12,154	1/1:8,2:9:6.02:64,6,0	0/1:16,2:17:39.23:39,0,236	0/0:14,0:14:12.02:0,12,156	0/1:17,1:17:17.10:17,0,162	1/1:12,6:18:18.05:193,18,0	0/0:20,0:18:0:0,0,0	0/1:11,1:12:17.13:17,0,118	0/1:23,0:26:0:0,0,0	1/1:10,3:13:3:32,3,0	0/1:25,1:26:8.59:9,0,229	0/0:21,0:21:15.05:0,15,221	1/1:7,0:12:2.84:14,3,0	1/1:18,0:19:2.37:8,2,0	0/1:17,2:18:43.05:43,0,194	0/1:10,0:13:8.10:8,0,33
chr10	88574382	.	TTC	T	5785.96	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.138;DP=669;FS=3.049;HRun=0;HaplotypeScore=83.5097;InbreedingCoeff=0.9999;MQ=87.06;MQ0=0;MQRankSum=-2.738;QD=35.72;ReadPosRankSum=1.755;VQSLOD=6.8774;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:45.15:0,45,798	0/0:16,0:16:45.14:0,45,770	0/0:24,0:24:46.59:0,47,764	0/0:39,0:37:78.46:0,78,1358	1/1:1,28:29:78.22:1051,78,0	1/1:0,26:26:69.23:948,69,0	1/1:1,22:23:60.20:825,60,0	0/0:33,0:33:90.31:0,90,1598	0/0:14,0:14:36.12:0,36,639	0/0:29,0:29:81.28:0,81,1432	0/0:24,0:24:69.24:0,69,1224	1/1:1,18:19:48.16:653,48,0	0/0:17,0:17:42.14:0,42,745	1/1:1,20:21:54.18:742,54,0	0/0:28,0:28:81.26:0,81,1401	0/0:24,0:24:66.23:0,66,1171	0/0:12,0:12:36.12:0,36,626	1/1:1,21:22:54.18:742,54,0	0/0:22,0:22:60.20:0,60,1030	0/0:26,0:26:72.25:0,72,1270	0/0:25,0:25:72.23:0,72,1240	1/1:2,20:22:60.20:825,60,0	0/0:22,0:22:66.23:0,66,1170	0/0:22,0:22:63.20:0,63,1089	0/0:13,0:13:36.12:0,36,631	0/0:39,0:39:99:0,114,1975	0/0:35,0:34:99:0,102,1762	0/0:23,0:23:63.22:0,63,1118
chr10	88576262	.	T	TC	3876.80	PASS	AB=0.561;AC=11;AF=0.196;AN=56;BaseQRankSum=3.100;DP=603;FS=2.898;HRun=6;HaplotypeScore=86.3083;InbreedingCoeff=0.9380;MQ=87.44;MQ0=0;MQRankSum=0.342;QD=28.30;ReadPosRankSum=1.043;VQSLOD=4.2275;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:34:78.24:968,78,0	0/0:15,0:15:33.03:0,33,326	0/0:19,0:19:53.57:0,54,512	0/0:29,0:29:35.70:0,36,514	0/0:16,0:16:30.06:0,30,305	0/0:20,0:19:48.03:0,48,464	0/0:25,0:25:54.11:0,54,550	1/1:8,20:28:60.15:736,60,0	0/0:24,0:24:57.05:0,57,581	0/0:26,0:26:75.17:0,75,765	0/0:15,0:14:33.07:0,33,336	0/0:23,0:23:42.09:0,42,428	0/0:19,0:19:38.92:0,39,397	0/0:25,0:25:57.12:0,57,581	0/0:21,0:21:51.11:0,51,520	0/0:19,0:19:45.10:0,45,459	0/0:20,0:20:60.13:0,60,610	0/0:21,0:21:54.01:0,54,541	0/0:16,0:16:45.10:0,45,459	0/0:29,0:29:75.16:0,75,763	1/1:2,17:19:45.14:566,45,0	0/0:15,0:15:33.07:0,33,337	0/0:33,0:33:72.11:0,72,723	0/0:18,0:18:51.07:0,51,504	1/1:0,22:22:48.12:587,48,0	0/1:5,18:23:1.06:604,0,1	0/0:18,0:18:51.07:0,51,510	1/1:0,11:11:33.11:415,33,0
chr10	88577647	.	T	TTCTAC	180.62	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.918;DP=604;FS=2.226;HRun=0;HaplotypeScore=110.2715;InbreedingCoeff=0.8356;MQ=80.23;MQ0=0;MQRankSum=-2.893;QD=36.12;ReadPosRankSum=1.005;VQSLOD=3.8129;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:3.01:93,3,0	0/0:10,0:10:30.10:0,30,628	0/0:17,0:17:41.80:0,42,841	0/0:15,0:15:42.13:0,42,754	0/0:31,0:31:84.29:0,84,1725	0/0:17,0:17:45.15:0,45,945	0/0:20,0:20:48.16:0,48,934	0/0:33,0:33:81.26:0,81,1622	0/0:23,0:23:66.22:0,66,1349	0/0:29,0:29:75.24:0,75,1465	0/0:20,0:20:57.18:0,57,1158	0/0:25,0:25:72.23:0,72,1458	0/0:28,0:28:78.27:0,78,1603	0/0:27,0:27:75.26:0,75,1572	0/0:17,0:17:48.15:0,48,933	0/0:22,0:22:66.23:0,66,1385	0/0:27,0:27:69.22:0,69,1408	0/0:21,0:21:54.19:0,54,1113	0/0:34,0:34:90.30:0,90,1824	0/0:29,0:29:84.25:0,84,1708	0/0:22,0:22:66.21:0,66,1348	0/0:20,0:20:57.19:0,57,1159	0/0:25,0:25:66.23:0,66,1385	0/0:23,0:23:69.21:0,69,1372	1/1:0,4:4:6.02:185,6,0	0/0:18,0:18:51.16:0,51,1001	0/0:33,0:33:93.28:0,93,1806	0/0:13,0:13:33.11:0,33,693
chr10	88578907	.	C	CGT	1420.25	PASS	AB=0.955;AC=24;AF=0.462;AN=52;BaseQRankSum=-2.383;DP=561;FS=2.408;HRun=0;HaplotypeScore=123.6229;InbreedingCoeff=0.0121;MQ=65.06;MQ0=4;MQRankSum=0.675;QD=4.33;ReadPosRankSum=-4.360;VQSLOD=1.5526;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:28:4.08:82,0,4	1/1:6,0:6:6.02:80,6,0	./.	./.	0/1:20,5:26:20.49:121,0,20	1/1:22,0:22:9.03:125,9,0	1/1:10,8:18:12.04:178,12,0	0/1:23,0:23:0:0,0,0	0/1:15,0:15:13.02:13,0,97	0/1:20,0:20:15.68:16,0,48	0/1:17,0:17:27.78:28,0,91	1/1:9,4:14:9.03:134,9,0	0/0:14,0:17:20.44:0,20,171	0/1:16,8:25:32.15:311,0,32	0/0:14,0:17:1.66:0,2,168	0/0:21,0:21:6.49:0,6,66	0/1:18,0:17:34.98:133,0,35	0/1:20,2:22:6:228,0,6	0/1:18,0:19:8.10:31,0,8	0/0:15,0:17:27.21:0,27,256	1/1:17,0:17:0.35:1,0,0	1/1:12,0:12:3.01:42,3,0	0/0:19,0:20:12.03:0,12,130	0/0:29,0:30:18.28:0,18,177	0/1:16,0:16:23.54:37,0,24	0/0:18,0:19:2.79:0,3,14	0/0:27,0:27:26.31:0,26,267	0/1:9,0:9:13.99:14,0,144
chr10	88578949	.	T	TGC	1714.93	PASS	AB=0.974;AC=29;AF=0.518;AN=56;BaseQRankSum=2.681;DP=486;FS=2.156;HRun=0;HaplotypeScore=156.7441;InbreedingCoeff=-0.1348;MQ=62.43;MQ0=4;MQRankSum=-4.165;QD=4.59;ReadPosRankSum=0.345;VQSLOD=3.0048;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,2:24:9.92:170,10,0	1/1:4,2:6:8.95:125,9,0	0/0:25,0:19:40.39:0,40,482	0/0:25,0:17:48.03:0,48,485	0/1:16,0:16:33.53:34,0,178	0/1:17,0:17:11.50:12,0,201	0/1:20,0:20:35.33:35,0,233	1/1:19,0:19:45.77:250,46,0	0/1:10,2:13:23.08:45,0,23	1/1:13,0:13:4.02:113,4,0	0/1:14,1:15:21.97:74,0,22	0/1:13,0:13:29.70:30,0,140	0/1:13,0:13:32.79:35,0,33	0/1:24,0:24:92.19:92,0,227	0/1:20,0:20:35.63:36,0,42	0/1:15,0:15:1.36:41,0,1	0/1:17,2:17:2.65:243,0,3	0/1:22,0:21:56.96:57,0,216	1/1:7,1:8:19.63:148,20,0	0/0:16,0:16:3.15:0,3,77	0/1:20,0:20:0:0,0,0	0/1:7,0:7:8.31:8,0,41	0/0:15,0:15:10.59:0,11,43	0/0:31,0:30:11.60:0,12,61	0/1:17,0:17:0.65:1,0,39	1/1:13,0:13:27.08:121,27,0	0/1:30,0:30:42.76:135,0,43	0/1:9,1:10:36.34:78,0,36
chr10	88578965	.	AACTGGAT	A	10748.97	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=5.978;DP=436;FS=4.001;HRun=0;HaplotypeScore=141.4621;InbreedingCoeff=0.9504;MQ=81.70;MQ0=1;MQRankSum=-13.628;QD=42.82;ReadPosRankSum=-2.376;VQSLOD=4.2362;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:17:24.93:543,25,0	1/1:1,4:5:12.04:297,12,0	0/0:27,0:22:54.19:0,54,1849	0/0:31,0:27:60.21:0,60,1814	0/0:17,0:17:33.11:0,33,1088	0/0:17,0:17:51.18:0,51,1796	0/0:25,0:25:69.24:0,69,2647	1/1:4,15:19:45.15:1092,45,0	1/1:0,7:7:21.07:520,21,0	1/1:3,9:12:30.10:717,30,0	1/1:2,6:8:12:243,12,0	0/0:11,0:11:27.09:0,27,1036	1/1:2,8:10:20.91:519,21,0	0/0:22,0:22:48.15:0,48,1761	1/1:4,15:19:39.13:966,39,0	1/1:1,10:11:21.07:520,21,0	1/1:2,12:14:21.03:466,21,0	0/0:20,0:20:54.19:0,54,1966	1/1:5,4:9:15.04:322,15,0	1/1:4,10:14:14.97:264,15,0	1/1:1,19:20:30.10:743,30,0	0/0:4,0:4:12.04:0,12,399	1/1:2,10:12:18.06:446,18,0	1/1:8,19:26:23.26:484,23,0	0/0:11,0:11:3.01:0,3,116	1/1:1,10:11:30.10:734,30,0	1/1:6,21:27:56.99:1331,57,0	1/1:1,8:9:24.07:543,24,0
chr10	88579427	.	G	GGTGAGCTGGT	2085.65	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=4.186;DP=586;FS=1.339;HRun=0;HaplotypeScore=188.7284;InbreedingCoeff=0.6734;MQ=83.32;MQ0=1;MQRankSum=-6.082;QD=12.80;ReadPosRankSum=-3.581;VQSLOD=2.1120;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,17:39:30.10:1092,30,0	0/0:15,0:15:33.10:0,33,806	0/0:37,0:34:37.94:0,38,861	0/0:36,0:31:20.27:0,20,590	0/0:18,0:18:24.01:0,24,521	0/0:14,0:14:24.07:0,24,473	0/0:23,0:23:42.08:0,42,1011	1/1:24,0:23:28.47:340,28,0	1/1:8,7:15:9.03:409,9,0	0/0:21,0:21:45.15:0,45,1262	0/1:16,0:16:9.36:9,0,844	0/0:21,0:20:42.12:0,42,860	0/0:17,0:17:42.14:0,42,1171	0/0:20,0:20:42.10:0,42,740	0/0:12,0:12:18.06:0,18,519	0/0:15,0:15:36.08:0,36,1017	0/0:46,0:46:90.12:0,90,2503	0/0:28,0:28:45.51:0,46,1077	0/0:22,0:22:30.10:0,30,824	0/0:14,0:14:39.12:0,39,1113	1/1:28,0:27:10.42:140,10,0	0/1:9,0:9:12.96:13,0,253	0/0:16,0:16:33.10:0,33,889	0/0:16,0:16:45.10:0,45,1196	0/0:21,0:21:45.14:0,45,1248	0/1:20,0:20:26.71:178,0,27	0/0:11,0:10:18.06:0,18,446	1/1:9,0:9:9.70:79,10,0
chr10	88579438	.	GTGAGCTGGTGTGAGTGGGTA	G	2109.64	PASS	AB=0.940;AC=13;AF=0.232;AN=56;BaseQRankSum=8.654;DP=590;FS=8.015;HRun=0;HaplotypeScore=285.1253;InbreedingCoeff=0.3292;MQ=74.43;MQ0=5;MQRankSum=-6.050;QD=10.99;ReadPosRankSum=-1.084;VQSLOD=0.7627;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:38:99:143,0,319	0/0:16,0:16:45.15:0,45,1601	0/0:39,0:26:30.86:0,31,726	0/0:46,0:29:40.49:0,40,598	0/0:16,0:16:3.49:0,3,207	0/1:11,0:11:5.72:6,0,156	0/0:20,0:20:37.09:0,37,472	1/1:20,0:18:37.36:710,37,0	0/1:13,0:13:46.02:46,0,231	0/0:25,0:25:63.22:0,63,2340	0/0:15,0:15:42.14:0,42,1673	0/0:19,0:18:12.96:0,13,286	0/0:15,0:15:45.15:0,45,1733	0/1:19,0:19:2.25:2,0,297	0/0:15,0:15:33.11:0,33,1493	0/0:14,0:14:36.08:0,36,1424	0/0:50,0:50:99:0,120,5053	0/1:25,0:25:5.52:6,0,431	0/0:24,0:24:42.07:0,42,1234	0/0:15,0:15:45.15:0,45,1849	1/1:28,0:27:24.08:499,24,0	0/1:8,0:8:12.96:13,0,136	0/0:17,0:17:39.13:0,39,1439	0/0:24,0:23:47.07:0,47,3040	0/0:19,0:19:51.16:0,51,1958	0/1:5,13:18:17.38:553,0,17	0/0:9,0:8:21.07:0,21,819	1/1:9,0:9:17.83:295,18,0
chr10	88579448	.	GTGAGTGGGTA	G	1909.26	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=7.242;DP=578;FS=3.497;HRun=0;HaplotypeScore=174.8278;InbreedingCoeff=0.5130;MQ=67.23;MQ0=11;MQRankSum=-4.550;QD=15.27;ReadPosRankSum=-1.168;VQSLOD=2.7209;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:37:99:149,0,593	0/0:18,0:18:54.18:0,54,1729	0/0:42,0:19:26.55:0,27,730	0/0:46,0:26:40.77:0,41,690	0/0:15,0:15:23.88:0,24,323	0/0:10,0:10:23.89:0,24,222	0/0:17,0:17:41.48:0,41,488	1/1:4,14:16:39.12:747,39,0	0/1:11,0:11:22.16:22,0,454	0/0:26,0:26:69.24:0,69,2331	0/0:18,0:18:50.38:0,50,1837	0/0:16,0:15:41.63:0,42,388	0/0:16,0:16:48.16:0,48,1579	0/0:16,0:16:41.59:0,42,512	0/0:12,0:12:33.11:0,33,1365	0/0:15,0:15:42.10:0,42,1375	0/0:51,0:51:99:0,138,4898	0/0:22,0:22:36.03:0,36,656	0/0:21,0:19:48.16:0,48,1305	0/0:18,0:18:54.18:0,54,1835	1/1:27,0:26:23.55:346,24,0	0/1:5,0:5:12.96:13,0,199	0/0:17,0:17:45.15:0,45,1615	0/0:28,0:27:69.33:0,69,2876	0/0:20,0:20:57.18:0,57,2014	0/1:16,0:16:90.71:507,0,91	0/0:9,0:8:24.08:0,24,778	1/1:8,0:8:17.83:288,18,0
chr10	88579628	.	GTGAGCTGGTGTGAGCGGGTA	G	4406.24	PASS	AC=40;AF=0.833;AN=48;BaseQRankSum=-3.011;DP=410;FS=1.442;HRun=0;HaplotypeScore=162.8095;InbreedingCoeff=0.5972;MQ=51.55;MQ0=28;MQRankSum=4.608;QD=14.31;ReadPosRankSum=4.718;VQSLOD=3.4783;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:27:39.05:579,39,0	./.	0/0:36,0:9:6.02:0,6,80	0/0:34,0:11:6.02:0,6,104	1/1:13,0:13:14.43:98,14,0	1/1:18,0:16:11.58:195,12,0	1/1:22,0:20:15.03:228,15,0	0/0:5,0:2:6.02:0,6,101	1/1:16,0:15:8.96:145,9,0	1/1:6,0:6:2.89:16,3,0	./.	1/1:15,0:13:18.06:295,18,0	1/1:10,0:9:18.05:284,18,0	1/1:19,0:17:15.02:192,15,0	1/1:12,0:12:9.03:168,9,0	1/1:10,0:9:9.03:172,9,0	1/1:18,0:16:2.21:23,2,0	1/1:22,0:22:36.12:596,36,0	1/1:23,0:15:9.01:117,9,0	1/1:11,0:10:11.91:92,12,0	0/0:9,0:5:2.92:0,3,17	./.	1/1:6,0:6:6.02:98,6,0	1/1:41,0:37:34.50:685,34,0	1/1:8,0:8:18.06:290,18,0	1/1:2,0:1:2.68:11,3,0	1/1:8,0:8:9.01:123,9,0	./.
chr10	88579638	.	GTGAGCGGGTA	G	703.89	PASS	AB=0.941;AC=15;AF=0.278;AN=54;BaseQRankSum=0.831;DP=370;FS=2.834;HRun=0;HaplotypeScore=104.5302;InbreedingCoeff=0.4166;MQ=50.67;MQ0=26;MQRankSum=1.433;QD=6.58;ReadPosRankSum=-4.081;VQSLOD=0.5742;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:42.06:0,42,944	1/1:1,0:1:3.01:70,3,0	0/1:35,0:8:2.05:2,0,211	0/0:36,0:8:18.03:0,18,233	0/1:11,0:11:0.24:0,0,148	0/0:15,0:13:23.96:0,24,432	0/0:18,0:16:35.90:0,36,575	0/0:9,0:5:12.04:0,12,163	0/0:11,0:10:10.87:0,11,142	1/1:0,6:6:15.05:286,15,0	1/1:2,0:2:3.01:68,3,0	0/0:14,0:12:27.03:0,27,413	0/1:12,0:11:99:116,0,214	0/0:19,0:17:30.10:0,30,553	0/0:11,0:11:18.96:0,19,201	0/0:7,0:6:12:0,12,150	1/1:0,15:14:9.03:227,9,0	0/0:22,0:22:60.05:0,60,830	0/1:10,2:10:38.09:38,0,132	0/1:9,2:10:10.96:11,0,280	0/0:8,0:4:2.92:0,3,17	0/0:11,0:10:14.82:0,15,190	0/0:4,0:4:9.03:0,9,173	0/0:37,0:33:77.66:0,78,1110	0/0:8,0:8:21.92:0,22,281	1/1:2,0:1:3.01:39,3,0	0/0:6,0:6:11.97:0,12,164	./.
chr10	88579658	.	GTGAGCGGGTA	G	3937.80	PASS	AB=0.976;AC=23;AF=0.479;AN=48;BaseQRankSum=-6.483;DP=370;FS=2.572;HRun=0;HaplotypeScore=90.3784;InbreedingCoeff=-0.5484;MQ=51.98;MQ0=38;MQRankSum=0.730;QD=15.44;ReadPosRankSum=7.180;VQSLOD=1.0109;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:25:99:508,0,222	./.	0/0:44,0:8:8.32:0,8,210	0/0:42,0:8:21.05:0,21,290	0/1:3,7:10:74.63:75,0,205	0/1:11,0:9:99:175,0,175	0/1:14,0:11:99:204,0,182	0/0:10,0:5:12.04:0,12,190	0/1:11,0:10:99:127,0,134	1/1:8,0:6:5.90:64,6,0	./.	0/1:14,0:12:99:265,0,210	0/1:16,0:15:99:222,0,482	0/1:19,0:17:99:158,0,302	0/1:9,0:9:99:133,0,143	0/1:11,0:10:99:131,0,250	1/1:15,0:13:0.93:22,1,0	0/1:20,0:20:99:541,0,394	0/1:10,0:5:71.91:72,0,96	0/1:9,0:7:53.94:54,0,138	0/0:9,2:5:3.01:0,3,34	./.	0/1:6,0:5:80.31:89,0,80	0/1:28,0:24:99:622,0,145	0/1:9,0:9:67.68:279,0,68	1/1:1,1:1:3.01:91,3,0	0/1:6,0:6:99:108,0,114	./.
chr10	88579998	.	A	AG	3928.17	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-13.745;DP=564;FS=0.000;HRun=1;HaplotypeScore=51.1006;InbreedingCoeff=0.9890;MQ=94.07;MQ0=0;MQRankSum=-1.307;QD=46.21;ReadPosRankSum=-2.134;VQSLOD=2.6812;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.19:0,57,797	0/0:4,0:4:12.04:0,12,168	0/0:22,0:22:66.18:0,66,870	0/0:29,0:29:84.21:0,84,1121	0/0:29,0:29:87.28:0,87,1201	0/0:22,0:22:66.22:0,66,923	0/0:21,0:21:60.20:0,60,839	1/1:0,42:42:99:1916,123,0	0/0:22,0:22:63.18:0,63,842	0/0:22,0:22:66.22:0,66,923	0/0:14,0:14:42.10:0,42,559	0/0:17,0:17:51.17:0,51,713	0/0:16,0:16:48.16:0,48,665	0/0:22,0:22:63.21:0,63,881	0/0:18,0:18:54.18:0,54,755	0/0:23,0:23:69.22:0,69,948	0/0:26,0:26:75.25:0,75,1045	0/0:21,0:21:57.19:0,57,797	0/0:19,0:19:51.17:0,51,714	0/0:26,0:26:78.22:0,78,1069	1/1:1,15:16:45.15:719,45,0	0/0:13,0:13:33.11:0,33,461	0/0:10,0:10:30.10:0,30,418	0/0:21,0:21:63.21:0,63,877	0/0:14,0:14:42.14:0,42,585	1/1:0,21:21:63.21:1005,63,0	0/0:29,0:29:84.27:0,84,1160	1/1:0,6:6:18.06:288,18,0
chr10	88580426	.	GT	G	2241.63	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.854;DP=616;FS=0.456;HRun=5;HaplotypeScore=78.8949;InbreedingCoeff=0.9713;MQ=73.07;MQ0=0;MQRankSum=-3.976;QD=26.07;ReadPosRankSum=-0.178;VQSLOD=3.0265;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,1500	0/0:5,0:5:12.04:0,12,162	0/0:13,0:13:27.08:0,27,355	0/0:15,0:15:7.89:0,8,284	0/0:22,0:22:60.14:0,60,782	0/0:19,0:19:48.12:0,48,634	0/0:26,0:26:75.25:0,75,1026	1/1:6,20:26:57.12:623,57,0	0/0:18,0:18:54.18:0,54,738	0/0:27,0:27:78.26:0,78,1066	0/0:14,0:14:42.14:0,42,574	0/0:20,0:20:60.20:0,60,820	0/0:25,0:25:63.20:0,63,847	0/0:25,0:25:66.21:0,66,887	0/0:21,0:21:57.18:0,57,763	0/0:19,0:19:48.15:0,48,640	0/0:28,0:28:84.28:0,84,1148	0/0:21,0:21:63.21:0,63,862	0/0:20,0:20:57.19:0,57,779	0/0:25,0:25:72.24:0,72,976	1/1:3,19:22:47.13:543,47,0	0/0:18,0:18:48.16:0,48,651	0/0:24,0:24:69.23:0,69,941	0/0:29,0:29:87.29:0,87,1189	0/0:25,0:25:75.25:0,75,1026	1/1:1,24:25:72.16:794,72,0	0/0:31,0:31:93.31:0,93,1271	1/1:0,13:13:39.11:442,39,0
chr10	88581291	.	T	TG	4136.50	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=14.614;DP=658;FS=1.308;HRun=1;HaplotypeScore=84.7719;InbreedingCoeff=0.9997;MQ=85.18;MQ0=0;MQRankSum=-1.110;QD=39.77;ReadPosRankSum=-0.687;VQSLOD=3.8205;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1440	0/0:10,0:10:30.10:0,30,389	0/0:26,0:27:73.45:0,73,903	0/0:15,0:15:32.85:0,33,484	0/0:23,0:23:69.22:0,69,887	0/0:17,0:17:37.49:0,37,609	0/0:19,0:19:57.17:0,57,726	1/1:4,20:24:66.22:973,66,0	0/0:15,0:15:45.13:0,45,570	0/0:26,0:26:78.25:0,78,1013	0/0:19,0:19:57.18:0,57,729	0/0:21,0:21:63.20:0,63,805	0/0:28,0:28:81.25:0,81,1036	0/0:25,0:25:75.23:0,75,958	0/0:24,0:24:72.23:0,72,935	0/0:18,0:18:54.14:0,54,670	0/0:38,0:38:99:0,114,1459	0/0:23,0:23:69.09:0,69,839	0/0:22,0:22:66.21:0,66,852	0/0:32,0:32:93.30:0,93,1207	1/1:1,30:31:78.26:1168,78,0	0/0:16,0:16:48.15:0,48,618	0/0:22,0:22:63.20:0,63,818	0/0:24,0:24:72.19:0,72,912	0/0:22,0:22:63.20:0,63,818	1/1:1,28:29:84.23:1231,84,0	0/0:30,0:30:87.28:0,87,1127	1/1:3,17:20:51.17:764,51,0
chr10	88581711	.	GA	G	867.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.756;DP=663;FS=1.694;HRun=1;HaplotypeScore=77.8589;InbreedingCoeff=0.9981;MQ=88.64;MQ0=0;MQRankSum=-1.956;QD=37.70;ReadPosRankSum=-0.110;VQSLOD=3.9322;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,2085	0/0:10,0:10:30.10:0,30,480	0/0:27,0:27:78.22:0,78,1210	0/0:24,0:24:41.68:0,42,899	0/0:40,0:40:99:0,120,1869	0/0:23,0:23:69.24:0,69,1103	0/0:20,0:20:60.20:0,60,957	0/0:32,0:32:96.28:0,96,1479	0/0:20,0:20:60.20:0,60,959	0/0:14,0:14:42.14:0,42,672	0/0:11,0:11:33.11:0,33,528	0/0:26,0:26:78.27:0,78,1247	0/0:25,0:25:75.24:0,75,1169	0/0:27,0:27:81.28:0,81,1295	0/0:26,0:26:78.27:0,78,1247	0/0:18,0:18:54.18:0,54,861	0/0:32,0:32:96.33:0,96,1534	0/0:26,0:26:78.25:0,78,1220	0/0:25,0:25:75.25:0,75,1173	0/0:32,0:32:96.33:0,96,1533	0/0:21,0:21:60.20:0,60,954	0/0:22,0:22:66.22:0,66,1051	0/0:29,0:29:87.28:0,87,1366	0/0:24,0:24:69.24:0,69,1103	1/1:0,23:23:69.23:962,69,0	0/0:16,0:16:45.15:0,45,718	0/0:16,0:16:48.15:0,48,743	0/0:9,0:9:27.09:0,27,431
chr10	88581742	.	AT	A	1277.27	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.677;DP=625;FS=1.620;HRun=1;HaplotypeScore=79.7864;InbreedingCoeff=0.9815;MQ=83.80;MQ0=0;MQRankSum=-10.684;QD=19.35;ReadPosRankSum=-1.808;VQSLOD=3.3780;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1719	0/0:11,0:11:33.11:0,33,525	0/0:23,0:23:66.57:0,67,996	0/0:16,0:16:42:0,42,598	0/0:36,0:36:99:0,108,1709	0/0:20,0:20:60.19:0,60,935	0/0:20,0:20:60.20:0,60,957	1/1:0,28:28:80.82:670,81,0	0/0:25,0:25:75.26:0,75,1189	0/0:21,0:21:63.20:0,63,966	0/0:18,0:18:51.17:0,51,810	0/0:26,0:26:78.25:0,78,1219	0/0:27,0:27:78.25:0,78,1215	0/0:26,0:26:78.22:0,78,1190	0/0:29,0:29:87.30:0,87,1380	0/0:21,0:21:63.19:0,63,977	0/0:26,0:26:75.24:0,75,1167	0/0:27,0:27:81.27:0,81,1273	0/0:21,0:21:63.20:0,63,976	0/0:24,0:24:72.25:0,72,1151	1/1:2,7:9:26.83:198,27,0	0/0:18,0:18:54.17:0,54,823	0/0:19,0:19:57.18:0,57,888	0/0:26,0:26:72.25:0,72,1142	0/0:22,0:22:66.23:0,66,1055	1/1:1,18:19:8.62:363,9,0	0/0:17,0:17:51.16:0,51,792	1/1:1,9:10:26.86:202,27,0
chr10	88581744	.	AGGGTC	A	2695.44	PASS	AB=0.514;AC=7;AF=0.125;AN=56;BaseQRankSum=12.333;DP=611;FS=0.000;HRun=0;HaplotypeScore=124.8369;InbreedingCoeff=0.8354;MQ=84.24;MQ0=0;MQRankSum=-11.164;QD=43.47;ReadPosRankSum=-1.530;VQSLOD=3.1145;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,3194	0/0:11,0:11:33.09:0,33,946	0/0:24,0:24:72.03:0,72,1803	0/0:15,0:15:39.07:0,39,857	0/0:37,0:37:99:0,111,3455	0/0:19,0:19:57.16:0,57,1809	0/0:21,0:21:63.21:0,63,1945	1/1:3,23:26:72.51:1185,73,0	0/0:24,0:24:72.25:0,72,2329	0/0:22,0:22:66.23:0,66,2181	0/0:17,0:17:45.15:0,45,1494	0/0:28,0:28:84.28:0,84,2622	0/0:25,0:25:75.25:0,75,2328	0/0:25,0:25:72.23:0,72,2314	0/0:28,0:28:84.26:0,84,2596	0/0:19,0:19:57.18:0,57,1776	0/0:24,0:24:72.23:0,72,2292	0/0:27,0:27:81.22:0,81,2467	0/0:23,0:23:69.22:0,69,2079	0/0:25,0:25:75.25:0,75,2401	1/1:1,7:8:23.29:351,23,0	0/0:17,0:17:51.09:0,51,1615	0/0:19,0:19:57.18:0,57,1769	0/0:26,0:26:75.22:0,75,2252	0/0:22,0:22:66.23:0,66,2197	0/1:1,18:19:42.78:856,0,43	0/0:17,0:17:51.18:0,51,1671	1/1:0,9:9:27.09:452,27,0
chr10	88581986	.	A	AAATG	3932.77	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.382;DP=565;FS=21.170;HRun=0;HaplotypeScore=132.0819;InbreedingCoeff=0.9909;MQ=84.87;MQ0=0;MQRankSum=-10.444;QD=70.23;ReadPosRankSum=-1.400;VQSLOD=2.9776;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1991	0/0:13,0:13:39.13:0,39,818	0/0:23,0:23:63.21:0,63,1208	0/0:14,0:14:26.88:0,27,556	0/0:32,0:32:87.24:0,87,1705	0/0:16,0:16:48.15:0,48,968	0/0:22,0:22:63.19:0,63,1281	1/1:9,12:21:57.20:1630,57,0	0/0:21,0:21:60.21:0,60,1258	0/0:23,0:23:66.23:0,66,1381	0/0:21,0:21:63.22:0,63,1293	0/0:22,0:22:63.22:0,63,1312	0/0:18,0:18:51.18:0,51,1069	0/0:20,0:20:57.16:0,57,1118	0/0:27,0:27:81.28:0,81,1645	0/0:11,0:11:33.11:0,33,692	0/0:21,0:21:63.15:0,63,1201	0/0:24,0:24:72.21:0,72,1459	0/0:20,0:20:51.17:0,51,1069	0/0:21,0:21:63.22:0,63,1315	1/1:5,3:10:12.04:345,12,0	0/0:21,0:21:60.19:0,60,1203	0/0:23,0:23:69.22:0,69,1407	0/0:21,0:21:57.20:0,57,1195	0/0:26,0:26:75.26:0,75,1559	1/1:3,9:13:36.12:1004,36,0	0/0:16,0:16:48.15:0,48,953	1/1:1,10:12:33.11:954,33,0
chr10	88582271	.	CT	C	1738.52	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.392;DP=527;FS=5.422;HRun=7;HaplotypeScore=62.1431;InbreedingCoeff=0.9893;MQ=71.50;MQ0=0;MQRankSum=-0.368;QD=24.15;ReadPosRankSum=-1.615;VQSLOD=3.2326;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:30.05:0,30,359	0/0:14,0:14:36.09:0,36,436	0/0:12,0:12:16.08:0,16,257	0/0:12,0:11:15:0,15,158	0/0:24,1:25:41.66:0,42,822	0/0:25,0:25:69.22:0,69,868	0/0:19,0:19:57.15:0,57,690	1/1:4,21:25:63.02:600,63,0	0/0:18,0:18:48.05:0,48,580	0/0:19,0:19:57.18:0,57,716	0/0:29,0:29:78.22:0,78,962	0/0:21,0:21:54.17:0,54,679	0/0:30,0:30:75.24:0,75,942	0/0:20,0:20:57.14:0,57,695	0/0:20,0:20:48.11:0,48,584	0/0:21,0:21:60.19:0,60,754	0/0:13,0:13:33.08:0,33,399	0/0:16,0:16:45.13:0,45,544	0/0:12,0:12:30.10:0,30,377	0/0:22,0:22:60.15:0,60,725	1/1:1,10:11:30.06:306,30,0	0/0:16,0:16:45.11:0,45,548	0/0:22,0:22:63.16:0,63,764	0/0:7,0:7:18.06:0,18,226	0/0:21,0:21:63.20:0,63,785	1/1:2,20:22:60.13:607,60,0	0/0:29,0:29:84.24:0,84,1039	1/1:0,14:14:39.05:387,39,0
chr10	88583880	.	AT	A	1472.13	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=9.577;DP=367;FS=0.000;HRun=6;HaplotypeScore=38.9069;InbreedingCoeff=0.9409;MQ=74.12;MQ0=0;MQRankSum=-0.735;QD=25.83;ReadPosRankSum=-2.340;VQSLOD=1.9846;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.22:0,81,1043	0/0:5,0:5:12.04:0,12,158	0/0:9,0:9:20.02:0,20,183	./.	0/0:29,0:29:87.27:0,87,1131	0/0:14,0:14:42.14:0,42,553	0/0:5,0:5:12.04:0,12,158	1/1:2,29:31:87.18:912,87,0	0/0:15,0:15:36.12:0,36,469	0/0:16,0:16:45.15:0,45,590	0/0:11,0:11:30.10:0,30,395	0/0:11,0:11:27.07:0,27,339	0/0:10,0:10:30.08:0,30,379	0/0:15,0:15:33.11:0,33,433	0/0:10,0:10:30.10:0,30,393	0/0:10,0:10:30.10:0,30,393	0/0:23,0:23:63.20:0,63,826	0/0:15,0:15:44.14:0,44,540	0/0:17,0:17:42.14:0,42,553	0/0:13,0:13:27.09:0,27,355	1/1:4,1:5:11.98:105,12,0	0/0:2,0:2:6.02:0,6,79	0/0:8,0:8:21.07:0,21,276	0/0:7,0:7:21.03:0,21,254	0/0:11,0:11:33.11:0,33,432	1/1:2,9:11:30.07:322,30,0	0/0:23,0:23:66.21:0,66,861	1/1:1,9:10:27.07:290,27,0
chr10	88583947	.	G	GA	1681.91	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.896;DP=396;FS=0.000;HRun=6;HaplotypeScore=50.6665;InbreedingCoeff=0.9282;MQ=80.99;MQ0=0;MQRankSum=-3.426;QD=27.13;ReadPosRankSum=-0.228;VQSLOD=3.4669;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.13:0,75,754	0/0:3,0:3:9.02:0,9,92	0/0:13,0:13:32.96:0,33,310	0/0:10,0:10:24.04:0,24,240	0/0:26,0:26:75.16:0,75,759	0/0:16,0:16:42.09:0,42,428	0/0:7,0:7:21.05:0,21,214	1/1:7,23:30:72.16:886,72,0	0/0:8,0:8:24.05:0,24,245	0/0:21,1:22:63.13:0,63,636	0/0:13,0:13:36.08:0,36,366	0/0:11,0:11:11.49:0,11,250	0/0:6,0:6:15.03:0,15,153	0/0:15,0:15:45.10:0,45,459	0/0:7,0:7:18.04:0,18,184	0/0:7,0:7:18.04:0,18,184	0/0:20,0:20:51.09:0,51,513	0/0:15,0:15:42.09:0,42,428	0/0:21,0:21:54.10:0,54,540	0/0:13,0:13:36.08:0,36,367	1/1:0,9:9:27.09:340,27,0	0/0:13,0:13:39.08:0,39,391	0/0:14,0:14:42.10:0,42,428	0/0:13,0:13:39.09:0,39,398	0/0:12,0:12:36.08:0,36,367	1/1:2,11:13:5.51:382,6,0	0/0:23,0:23:60.12:0,60,604	1/1:0,10:10:18.06:226,18,0
chr10	88584445	.	ACAGCAGGGC	A	73.25	PASS	AB=0.917;AC=3;AF=0.054;AN=56;BaseQRankSum=4.177;DP=513;FS=0.000;HRun=0;HaplotypeScore=129.7266;InbreedingCoeff=0.3863;MQ=48.66;MQ0=43;MQRankSum=-2.822;QD=4.88;ReadPosRankSum=-0.023;VQSLOD=2.4050;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:23:39.12:0,39,1535	0/0:5,0:5:15.05:0,15,596	0/0:13,0:7:20.86:0,21,744	0/0:10,0:10:27.09:0,27,874	0/0:4,0:4:12.04:0,12,542	0/0:15,0:15:45.13:0,45,1676	0/0:37,0:36:99:0,102,4215	0/0:17,0:7:8.62:0,9,53	0/0:24,0:24:41.14:0,41,1553	0/0:19,0:18:54.16:0,54,2087	0/0:5,0:5:9.02:0,9,301	0/0:34,0:34:99:0,99,4299	0/0:17,0:14:36.07:0,36,1174	0/0:28,0:28:78.16:0,78,3414	0/0:20,0:19:26.25:0,26,1222	0/0:14,0:13:27.07:0,27,905	0/0:38,0:33:69.19:0,69,2664	0/0:29,0:28:78.22:0,78,3278	0/0:14,0:8:24.08:0,24,941	0/0:10,0:10:30.07:0,30,1030	0/0:33,2:14:2.61:0,3,38	0/0:6,0:6:12.04:0,12,571	0/0:4,0:4:6.02:0,6,197	0/0:40,0:38:60.19:0,60,2270	0/0:17,0:17:48.16:0,48,2153	0/1:10,1:9:19.88:20,0,159	0/0:15,0:15:30.51:0,31,1290	1/1:1,3:3:6.02:147,6,0
chr10	88585180	.	AC	A	1174.98	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.465;DP=686;FS=2.050;HRun=2;HaplotypeScore=104.4666;InbreedingCoeff=0.9665;MQ=81.48;MQ0=0;MQRankSum=-8.227;QD=25.54;ReadPosRankSum=2.271;VQSLOD=3.5579;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.31:0,90,1438	0/0:10,0:10:30.10:0,30,476	0/0:24,0:24:69.22:0,69,1051	0/0:18,0:18:45.06:0,45,617	0/0:29,0:29:84.20:0,84,1297	0/0:29,0:29:87.30:0,87,1390	0/0:18,0:18:54.18:0,54,863	1/1:0,3:6:18.02:176,18,0	0/0:25,0:25:75.24:0,75,1172	0/0:27,0:27:81.24:0,81,1248	0/0:24,0:24:69.24:0,69,1100	0/0:29,0:29:87.28:0,87,1362	0/0:27,0:27:81.24:0,81,1267	0/0:32,0:32:96.30:0,96,1483	0/0:39,0:39:99:0,117,1821	0/0:24,0:24:72.22:0,72,1112	0/0:25,0:25:75.23:0,75,1169	0/0:25,0:25:75.26:0,75,1198	0/0:26,0:26:75.24:0,75,1174	0/0:30,0:30:90.31:0,90,1438	1/1:1,2:3:6.02:66,6,0	0/0:40,0:40:99:0,120,1846	0/0:30,0:30:90.24:0,90,1379	0/0:21,0:21:63.15:0,63,933	0/0:28,0:28:78.24:0,78,1222	1/1:0,27:26:75.20:837,75,0	0/0:30,0:30:90.31:0,90,1425	1/1:0,10:10:21.06:249,21,0
chr10	88585182	.	T	TAG	1067.83	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.309;DP=692;FS=2.115;HRun=0;HaplotypeScore=121.1404;InbreedingCoeff=0.9585;MQ=81.33;MQ0=0;MQRankSum=-8.443;QD=23.73;ReadPosRankSum=2.801;VQSLOD=4.6860;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.31:0,90,1468	0/0:12,0:12:36.07:0,36,533	0/0:23,0:23:66.21:0,66,973	0/0:19,0:19:44.78:0,45,602	0/0:34,0:34:81.18:0,81,1267	0/0:29,0:29:87.29:0,87,1396	0/0:19,0:19:54.18:0,54,881	1/1:3,3:6:11.36:115,11,0	0/0:26,0:26:75.24:0,75,1197	0/0:27,0:27:81.27:0,81,1301	0/0:26,0:26:75.23:0,75,1177	0/0:28,0:28:84.28:0,84,1348	0/0:27,0:27:81.27:0,81,1292	0/0:31,0:31:93.32:0,93,1514	0/0:37,0:37:99:0,111,1784	0/0:24,0:24:69.23:0,69,1104	0/0:24,0:24:72.22:0,72,1126	0/0:26,0:26:75.20:0,75,1170	0/0:26,0:26:72.24:0,72,1149	0/0:30,0:30:90.30:0,90,1445	1/1:1,2:3:6.02:65,6,0	0/0:38,0:38:99:0,114,1857	0/0:30,0:30:87.28:0,87,1387	0/0:20,0:20:60.18:0,60,950	0/0:29,0:29:75.12:0,75,1222	1/1:2,24:25:74.25:835,74,0	0/0:31,0:31:93.28:0,93,1446	1/1:5,5:10:20.87:203,21,0
chr10	88585184	.	G	GGGTCAC	6092.63	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.800;DP=722;FS=10.856;HRun=0;HaplotypeScore=183.3698;InbreedingCoeff=0.9696;MQ=79.31;MQ0=0;MQRankSum=-12.241;QD=80.17;ReadPosRankSum=0.080;VQSLOD=5.2323;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.30:0,96,2361	0/0:12,0:12:36.12:0,36,879	0/0:22,0:22:66.21:0,66,1507	0/0:19,0:19:48.10:0,48,1007	0/0:34,0:34:96.27:0,96,2194	0/0:29,0:29:87.28:0,87,2145	0/0:19,0:19:57.20:0,57,1431	1/1:19,3:22:48.16:1467,48,0	0/0:25,0:25:75.26:0,75,1883	0/0:27,0:27:81.28:0,81,2037	0/0:26,0:26:75.26:0,75,1874	0/0:27,0:27:81.28:0,81,2065	0/0:26,0:26:78.27:0,78,1961	0/0:31,0:31:93.32:0,93,2323	0/0:37,0:37:99:0,111,2739	0/0:25,0:25:72.23:0,72,1753	0/0:23,0:23:69.22:0,69,1704	0/0:27,0:27:75.24:0,75,1836	0/0:25,0:25:72.25:0,72,1802	0/0:31,0:31:90.30:0,90,2238	1/1:3,2:5:6.02:214,6,0	0/0:38,0:38:99:0,114,2893	0/0:30,0:30:87.30:0,87,2180	0/0:22,0:22:66.19:0,66,1545	0/0:28,0:28:81.28:0,81,1975	1/1:14,24:37:99:3784,111,0	0/0:31,0:31:93.28:0,93,2233	1/1:6,5:11:24.51:627,25,0
chr10	88585593	.	T	TATC	4440.89	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.652;DP=594;FS=14.420;HRun=0;HaplotypeScore=97.1086;InbreedingCoeff=0.9969;MQ=88.75;MQ0=0;MQRankSum=-9.329;QD=60.83;ReadPosRankSum=-0.786;VQSLOD=4.9511;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:92.12:0,92,1528	0/0:7,0:7:21.07:0,21,351	0/0:28,0:28:81.22:0,81,1286	0/0:19,0:19:51.15:0,51,811	0/0:33,0:33:99:0,99,1648	0/0:20,0:20:57.16:0,57,911	0/0:9,0:9:27.09:0,27,460	1/1:7,21:28:75.26:1643,75,0	0/0:11,0:11:33.11:0,33,561	0/0:35,0:35:99:0,99,1674	0/0:21,0:21:63.16:0,63,994	0/0:19,0:19:57.13:0,57,906	0/0:15,0:15:39.13:0,39,665	0/0:12,0:12:33.11:0,33,563	0/0:21,0:21:63.18:0,63,1029	0/0:27,0:27:81.25:0,81,1315	0/0:38,0:38:99:0,111,1832	0/0:10,0:10:30.10:0,30,496	0/0:24,0:24:69.24:0,69,1167	0/0:32,0:32:96.31:0,96,1581	1/1:2,9:11:27.09:588,27,0	0/0:18,0:18:54.18:0,54,905	0/0:16,0:16:42.14:0,42,716	0/0:18,0:18:54.17:0,54,884	0/0:25,0:25:75.26:0,75,1279	1/1:2,14:16:21.24:967,21,0	0/0:31,0:31:87.24:0,87,1401	1/1:0,18:18:54.19:1243,54,0
chr10	88585805	.	G	GAT	5418.21	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-13.178;DP=569;FS=8.140;HRun=0;HaplotypeScore=62.9618;InbreedingCoeff=0.9989;MQ=78.84;MQ0=0;MQRankSum=-0.474;QD=39.26;ReadPosRankSum=2.117;VQSLOD=6.6726;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.22:0,69,887	0/0:8,0:8:24.08:0,24,309	0/0:13,0:13:24.07:0,24,297	0/0:18,0:18:40.34:0,40,552	1/1:2,21:25:54.18:909,54,0	1/1:3,17:20:48.16:809,48,0	1/1:6,11:17:30.10:505,30,0	0/0:39,0:39:81.25:0,81,1031	0/0:10,0:10:27.07:0,27,333	0/0:35,0:35:89.10:0,89,1124	0/0:16,0:16:39.13:0,39,501	1/1:3,17:21:51.16:817,51,0	0/0:26,0:26:69.22:0,69,887	1/1:0,18:18:51.17:860,51,0	0/0:21,0:21:57.17:0,57,719	0/0:23,0:23:63.15:0,63,755	0/0:18,0:18:51.17:0,51,656	1/1:0,13:13:39.13:658,39,0	0/0:27,0:27:57.17:0,57,707	0/0:22,0:22:57.18:0,57,733	0/0:13,0:13:39.11:0,39,488	1/1:5,19:24:51.17:860,51,0	0/0:16,0:16:42.12:0,42,526	0/0:23,0:23:66.18:0,66,820	0/0:15,0:15:39.11:0,39,488	0/0:16,0:16:48.14:0,48,603	0/0:31,0:30:75.23:0,75,951	0/0:15,0:15:45.15:0,45,579
chr10	88585967	.	TATA	T	1407.48	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.959;DP=483;FS=2.795;HRun=0;HaplotypeScore=101.0257;InbreedingCoeff=0.9902;MQ=72.88;MQ0=0;MQRankSum=-9.644;QD=31.28;ReadPosRankSum=1.559;VQSLOD=3.8548;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.18:0,63,1394	1/1:0,7:6:18.06:218,18,0	0/0:9,0:9:27.08:0,27,548	0/0:12,0:12:36.12:0,36,812	0/0:17,0:17:48.16:0,48,1155	0/0:22,0:22:66.19:0,66,1526	0/0:12,0:12:36.11:0,36,838	0/0:29,0:29:84.26:0,84,1990	0/0:6,0:6:18.04:0,18,394	1/1:0,17:17:51.13:619,51,0	1/1:0,10:10:30.09:357,30,0	0/0:21,0:21:63.22:0,63,1529	0/0:18,0:18:54.19:0,54,1330	0/0:17,0:17:51.12:0,51,1013	0/0:22,0:22:66.19:0,66,1454	0/0:22,0:22:66.21:0,66,1554	1/1:2,9:11:33.03:373,33,0	0/0:14,0:14:42.13:0,42,985	0/0:21,0:21:60.18:0,60,1355	0/0:25,0:25:75.24:0,75,1746	0/0:21,0:21:63.22:0,63,1525	0/0:5,0:5:15.04:0,15,321	0/0:17,0:17:51.18:0,51,1246	0/0:17,0:17:51.15:0,51,1202	0/0:25,0:25:75.26:0,75,1822	0/0:21,1:21:27.17:0,27,1513	0/0:25,0:25:75.24:0,75,1746	0/0:17,0:17:42.14:0,42,1023
chr10	88585971	.	GTACCTAC	G	2394.96	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.787;DP=464;FS=1.281;HRun=0;HaplotypeScore=132.0639;InbreedingCoeff=0.9667;MQ=72.25;MQ0=0;MQRankSum=-9.907;QD=55.70;ReadPosRankSum=1.663;VQSLOD=3.8357;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.22:0,63,2485	1/1:0,7:6:18.06:369,18,0	0/0:7,0:7:21.07:0,21,722	0/0:11,0:11:33.11:0,33,1193	0/0:17,0:17:48.15:0,48,1775	0/0:21,0:21:63.19:0,63,2318	0/0:11,0:11:33.11:0,33,1348	0/0:29,0:29:81.27:0,81,3121	0/0:6,0:6:18.06:0,18,638	1/1:1,15:16:48.16:984,48,0	1/1:0,10:10:30.10:608,30,0	0/0:21,0:21:63.20:0,63,2420	0/0:19,0:19:57.20:0,57,2296	0/0:12,0:12:36.12:0,36,1460	0/0:19,0:19:57.20:0,57,2240	0/0:20,0:20:60.21:0,60,2381	1/1:1,9:10:30.10:594,30,0	0/0:13,0:13:39.13:0,39,1594	0/0:18,0:18:51.15:0,51,1820	0/0:26,0:26:78.25:0,78,2931	0/0:21,0:21:63.22:0,63,2567	0/0:4,0:4:12.04:0,12,484	0/0:18,0:18:48.15:0,48,1842	0/0:16,0:16:48.16:0,48,1877	0/0:26,0:26:78.25:0,78,2857	0/0:23,1:23:8.16:0,8,2641	0/0:24,0:24:72.25:0,72,2733	0/0:16,0:16:42.14:0,42,1714
chr10	88586216	.	AC	A	3603.24	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=5.386;DP=429;FS=18.080;HRun=1;HaplotypeScore=74.6077;InbreedingCoeff=0.9921;MQ=78.21;MQ0=7;MQRankSum=-2.853;QD=38.33;ReadPosRankSum=1.109;VQSLOD=1.9702;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.23:0,69,1081	0/0:8,0:8:24.08:0,24,382	0/0:18,1:13:35.59:0,36,473	0/0:31,0:19:44.28:0,44,663	1/1:0,19:19:57.03:723,57,0	1/1:2,15:17:51.17:690,51,0	1/1:0,12:12:33.11:457,33,0	0/0:23,0:23:69.23:0,69,1075	0/0:12,0:11:24.08:0,24,367	0/0:17,0:17:51.17:0,51,810	0/0:16,0:16:47.29:0,47,693	1/1:0,11:11:33.11:432,33,0	0/0:7,0:7:12.04:0,12,191	1/1:0,13:13:33.04:421,33,0	0/0:8,0:8:24.08:0,24,371	0/0:11,0:11:33.10:0,33,499	0/0:33,0:33:78.24:0,78,1206	1/1:0,13:13:39.13:535,39,0	0/0:13,0:13:39.11:0,39,595	0/0:16,0:16:48.05:0,48,676	0/0:16,0:16:44.79:0,45,645	1/1:0,9:9:27:345,27,0	0/0:8,0:8:24.08:0,24,365	0/0:13,0:13:30.07:0,30,451	0/0:12,0:12:30.10:0,30,474	0/0:18,0:18:51.14:0,51,764	0/0:12,0:12:30.08:0,30,430	0/0:14,0:14:30.07:0,30,432
chr10	88586236	.	C	CTG	1001.46	PASS	AB=0.870;AC=23;AF=0.426;AN=54;BaseQRankSum=-6.329;DP=458;FS=19.700;HRun=0;HaplotypeScore=97.0802;InbreedingCoeff=0.1215;MQ=67.45;MQ0=21;MQRankSum=0.500;QD=3.67;ReadPosRankSum=-1.892;VQSLOD=0.8568;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,14:35:15.05:228,15,0	0/0:7,0:6:0.47:0,0,1	./.	0/1:41,0:16:0:0,0,0	0/0:13,0:18:6.11:0,6,28	0/1:11,0:15:15.92:16,0,19	0/0:9,0:12:2.84:0,3,14	1/1:27,0:25:3.01:37,3,0	0/1:9,5:13:6.78:40,0,7	0/1:10,0:16:12.86:13,0,22	0/0:7,0:11:8.02:0,8,41	0/0:9,0:12:9.37:0,9,43	1/1:2,8:10:9.03:128,9,0	0/0:6,0:9:8.52:0,9,42	1/1:3,2:5:6.02:91,6,0	0/1:4,3:7:25.27:45,0,25	0/0:10,0:36:42.61:0,43,210	0/1:10,0:10:0.04:0,0,0	0/1:12,0:12:0.05:0,0,0	0/1:5,8:13:52.25:122,0,52	1/1:16,0:16:5.03:31,5,0	0/0:7,0:9:6.04:0,6,27	0/1:7,1:8:27.50:40,0,28	0/1:6,9:15:44.58:281,0,45	0/0:7,0:14:5.91:0,6,25	0/1:15,0:15:11.49:11,0,16	1/1:8,6:14:5.46:70,5,0	0/0:13,0:13:2.80:0,3,13
chr10	88586260	.	GTGTGTGTGTA	G	1344.75	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=5.167;DP=405;FS=1.905;HRun=0;HaplotypeScore=124.9333;InbreedingCoeff=0.3237;MQ=54.53;MQ0=19;MQRankSum=0.015;QD=9.09;ReadPosRankSum=-1.956;VQSLOD=2.0592;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:27.51:0,28,774	1/1:3,0:2:2.99:23,3,0	0/0:33,0:8:4.38:0,4,95	0/0:38,0:14:17.64:0,18,308	1/1:11,0:11:10.16:56,10,0	0/1:15,0:15:47.07:110,0,47	0/1:16,0:16:0.30:0,0,136	0/1:19,0:17:73.03:186,0,73	0/0:10,0:9:9:0,9,236	0/0:16,0:15:12.17:0,12,525	0/0:8,0:8:15.41:0,15,181	0/1:11,0:11:34.25:80,0,34	0/0:8,0:8:9.92:0,10,361	0/1:7,0:7:33.74:49,0,34	0/0:4,0:4:6.02:0,6,264	0/0:7,0:7:13.56:0,14,340	0/0:34,0:34:56.66:0,57,1005	0/1:10,0:10:11.10:11,0,27	0/0:8,0:8:14.85:0,15,223	0/0:10,0:10:15.05:0,15,711	0/1:25,0:25:99:365,0,137	1/1:4,0:4:11.14:70,11,0	0/0:4,0:4:9.03:0,9,363	0/0:21,0:21:41.96:0,42,1434	0/0:16,0:16:23.82:0,24,269	1/1:3,11:14:29.94:398,30,0	0/0:9,0:9:15.52:0,16,571	1/1:0,13:13:14.83:170,15,0
chr10	88586387	.	T	TCTCCTAAC	30980.91	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-4.863;DP=422;FS=0.573;HRun=0;HaplotypeScore=100.0589;InbreedingCoeff=0.9358;MQ=73.22;MQ0=0;MQRankSum=-11.171;QD=87.03;ReadPosRankSum=0.244;VQSLOD=5.2947;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:22:45.15:1461,45,0	1/1:0,6:8:17.86:708,18,0	0/0:16,0:13:32.09:0,32,686	0/0:32,0:28:68.53:0,69,1889	1/1:2,10:12:32.92:1176,33,0	1/1:1,15:21:47.91:1676,48,0	1/1:1,10:14:33.11:1343,33,0	1/1:6,9:21:60.16:2104,60,0	1/1:4,9:15:38.88:1366,39,0	1/1:3,11:15:45.15:1983,45,0	1/1:2,4:7:12.04:521,12,0	1/1:1,15:16:48.08:2027,48,0	1/1:3,11:15:42.06:1592,42,0	1/1:2,6:7:17.89:522,18,0	1/1:4,13:23:53.67:1582,54,0	1/1:6,6:14:35.87:927,36,0	1/1:2,6:11:24.08:1104,24,0	1/1:4,1:6:14.88:398,15,0	1/1:9,8:20:60.18:2263,60,0	1/1:5,10:18:44.68:1299,45,0	1/1:2,11:16:35.88:906,36,0	1/1:5,7:12:35.54:823,36,0	1/1:3,3:6:14.84:446,15,0	1/1:2,4:12:6.02:177,6,0	0/0:18,0:18:54.19:0,54,1635	1/1:1,15:17:42.14:1898,42,0	1/1:3,11:15:44.90:1422,45,0	1/1:1,9:12:30.10:1258,30,0
chr10	88587155	.	G	GAGT	5871.87	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-7.267;DP=780;FS=5.272;HRun=0;HaplotypeScore=125.8186;InbreedingCoeff=0.9998;MQ=91.09;MQ0=0;MQRankSum=-5.335;QD=53.87;ReadPosRankSum=0.109;VQSLOD=6.3765;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,2364	0/0:14,0:14:42.13:0,42,751	0/0:37,0:37:99:0,111,1910	0/0:27,0:27:78.19:0,78,1255	0/0:21,0:21:63.22:0,63,1144	0/0:12,0:12:36.12:0,36,671	0/0:24,0:24:72.22:0,72,1243	1/1:1,31:32:96.28:2214,96,0	0/0:40,0:40:99:0,120,2205	0/0:30,0:30:90.29:0,90,1573	0/0:21,0:21:63.21:0,63,1145	0/0:31,0:31:87.28:0,87,1561	0/0:25,0:25:75.22:0,75,1261	0/0:30,0:30:90.27:0,90,1614	0/0:26,0:26:78.24:0,78,1378	0/0:28,0:28:84.29:0,84,1557	0/0:19,0:19:57.19:0,57,1032	0/0:21,0:21:60.18:0,60,1056	0/0:26,0:26:78.25:0,78,1392	0/0:45,0:45:99:0,132,2421	1/1:0,28:30:42.14:997,42,0	0/0:29,0:29:87.28:0,87,1549	0/0:18,0:18:54.16:0,54,944	0/0:39,0:39:99:0,111,2004	0/0:22,0:22:66.23:0,66,1230	1/1:5,27:32:31.73:1849,32,0	0/0:40,0:40:99:0,120,2159	1/1:0,15:15:33.11:812,33,0
chr10	88587520	.	G	GA	14614.79	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-12.811;DP=613;FS=0.691;HRun=3;HaplotypeScore=59.8378;InbreedingCoeff=0.9973;MQ=89.26;MQ0=0;MQRankSum=-2.712;QD=35.05;ReadPosRankSum=3.232;VQSLOD=5.4218;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,37:38:90.30:1241,90,0	1/1:0,9:9:24.08:331,24,0	0/0:24,0:24:55.23:0,55,690	0/0:28,0:27:55.07:0,55,603	0/0:15,0:15:36.04:0,36,400	0/0:23,0:23:63.18:0,63,741	0/0:24,0:24:63.14:0,63,726	1/1:2,35:37:99:1322,105,0	1/1:2,25:27:69.23:949,69,0	1/1:0,21:22:66.16:863,66,0	1/1:0,13:13:36.12:496,36,0	0/0:21,0:21:54.16:0,54,646	1/1:0,29:29:78.26:1075,78,0	0/0:16,0:16:48.10:0,48,548	1/1:1,22:22:63.14:844,63,0	1/1:0,23:24:55.35:821,55,0	1/1:1,19:20:48.16:662,48,0	0/0:23,0:23:62.62:0,63,696	1/1:0,19:19:57.14:735,57,0	1/1:1,22:23:63.13:827,63,0	1/1:3,33:36:84.24:1137,84,0	0/0:17,0:17:45.10:0,45,502	1/1:2,15:17:38.88:537,39,0	1/1:0,27:27:60.20:828,60,0	0/0:5,0:5:15.05:0,15,179	1/1:1,20:21:60.17:790,60,0	1/1:1,16:17:42.14:579,42,0	1/1:0,15:15:42.14:578,42,0
chr10	88588183	.	A	AG	84.13	PASS	AB=0.944;AC=10;AF=0.192;AN=52;BaseQRankSum=6.124;DP=257;FS=4.524;HRun=3;HaplotypeScore=54.7247;InbreedingCoeff=-0.0164;MQ=43.41;MQ0=6;MQRankSum=-3.114;QD=0.90;ReadPosRankSum=4.325;VQSLOD=-0.7014;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:11.11:0,11,124	0/0:3,0:3:8.49:0,8,71	./.	0/0:5,0:4:2.74:0,3,37	0/0:11,1:13:4.15:0,4,41	0/0:12,1:13:22.24:0,22,264	0/0:9,0:9:11.99:0,12,102	0/1:15,3:17:77.97:78,0,327	0/1:7,2:9:35.08:35,0,36	0/1:11,2:13:50.66:51,0,218	1/1:12,0:12:0.38:8,0,0	0/0:5,0:5:3.69:0,4,70	0/1:5,0:5:0.04:0,0,0	0/0:13,0:12:17.15:0,17,176	0/1:8,0:8:8.28:8,0,17	0/0:8,0:8:4.05:0,4,45	0/0:15,0:15:10.75:0,11,184	0/0:6,0:6:9.46:0,9,94	0/0:10,0:9:23.09:0,23,217	0/1:10,0:9:3.17:3,0,35	./.	0/0:6,0:6:5.49:0,5,31	0/0:5,0:5:2.29:0,2,35	0/1:6,0:6:0:0,0,0	0/0:16,0:16:24.50:0,25,261	0/0:12,0:11:13.53:0,14,156	0/1:12,0:11:13.44:13,0,140	0/0:7,0:7:10.62:0,11,155
chr10	88588869	.	TA	T	2878.82	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.352;DP=617;FS=2.023;HRun=2;HaplotypeScore=58.2075;InbreedingCoeff=0.9998;MQ=86.01;MQ0=0;MQRankSum=-2.180;QD=33.47;ReadPosRankSum=1.968;VQSLOD=3.6847;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1860	0/0:11,0:11:33.10:0,33,468	0/0:30,0:30:83.62:0,84,1150	0/0:17,0:17:51.10:0,51,690	0/0:13,0:13:33.11:0,33,485	0/0:19,0:19:54.16:0,54,761	0/0:25,0:25:72.12:0,72,979	1/1:0,26:26:75.18:902,75,0	0/0:21,0:21:63.20:0,63,912	0/0:30,0:30:78.26:0,78,1151	0/0:15,0:15:39.12:0,39,553	0/0:22,0:22:66.19:0,66,953	0/0:26,0:26:78.23:0,78,1099	0/0:17,0:17:48.13:0,48,664	0/0:16,0:16:45.14:0,45,648	0/0:34,0:34:99:0,102,1469	0/0:23,0:23:69.22:0,69,1001	0/0:30,0:30:87.27:0,87,1262	0/0:17,0:17:48.16:0,48,694	0/0:14,0:14:39.12:0,39,556	1/1:1,21:22:60.19:777,60,0	0/0:14,0:14:39.10:0,39,522	0/0:15,0:15:45.13:0,45,628	0/0:33,0:33:99:0,99,1426	0/0:20,0:20:57.19:0,57,822	1/1:2,15:17:45.15:583,45,0	0/0:24,0:24:72.23:0,72,1047	1/1:0,21:21:60.19:777,60,0
chr10	88588980	.	A	AAAAC	4273.17	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=1.498;DP=568;FS=0.000;HRun=0;HaplotypeScore=108.7132;InbreedingCoeff=0.9579;MQ=61.59;MQ0=1;MQRankSum=-2.604;QD=28.68;ReadPosRankSum=-3.259;VQSLOD=4.1156;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:20:33.03:0,33,307	1/1:2,2:4:6.02:139,6,0	0/0:27,0:20:12.04:0,12,190	0/0:20,0:14:11.98:0,12,113	0/0:21,0:21:48.16:0,48,761	0/0:18,0:19:45.14:0,45,674	0/0:20,0:20:26.88:0,27,396	1/1:33,0:32:34.29:434,34,0	0/0:3,0:10:21.01:0,21,192	1/1:10,11:22:42.13:902,42,0	1/1:4,7:11:21.07:501,21,0	0/0:24,0:24:30.10:0,30,474	0/0:23,0:23:45.13:0,45,668	0/0:12,0:12:18.02:0,18,259	0/0:20,0:20:33.09:0,33,477	0/0:18,0:18:24.06:0,24,340	1/1:16,10:27:33.11:756,33,0	0/0:39,0:39:92.85:0,93,1386	0/0:18,0:18:30.04:0,30,429	0/0:26,0:26:48.15:0,48,742	1/1:11,0:11:9.03:143,9,0	0/0:17,0:17:45.09:0,45,648	0/0:15,0:15:27.08:0,27,408	0/0:26,0:26:47.30:0,47,717	0/0:5,0:17:24.03:0,24,224	1/1:14,1:28:57.16:950,57,0	0/0:27,0:27:48.15:0,48,743	1/1:6,0:13:27.09:448,27,0
chr10	88589126	.	C	CT	1576.50	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=-1.092;DP=481;FS=2.275;HRun=7;HaplotypeScore=89.4232;InbreedingCoeff=0.8738;MQ=65.81;MQ0=3;MQRankSum=-0.346;QD=16.77;ReadPosRankSum=0.614;VQSLOD=3.6427;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:66.09:0,66,636	0/0:7,0:7:20.71:0,21,184	0/1:10,0:8:8.08:8,0,19	./.	0/0:27,0:27:69.08:0,69,651	0/0:14,0:14:33.05:0,33,318	0/0:20,0:20:32.96:0,33,293	1/1:18,0:18:41.90:347,42,0	0/0:6,0:6:11.76:0,12,99	0/0:24,0:24:62.69:0,63,586	0/0:23,0:24:67.06:0,67,575	0/0:11,0:11:24.02:0,24,228	0/0:16,0:16:47.17:0,47,398	0/0:23,0:22:41.90:0,42,381	0/0:20,0:20:49.68:0,50,434	0/0:11,0:11:26.63:0,27,241	0/0:27,0:27:68.53:0,69,621	0/0:17,0:17:45.02:0,45,424	0/0:23,0:23:59.27:0,59,538	0/0:19,0:19:50.10:0,50,437	1/1:7,0:7:20.92:162,21,0	0/0:7,0:7:18.02:0,18,167	0/0:22,0:22:59.77:0,60,559	0/0:6,0:6:9.49:0,9,87	1/1:2,16:18:45.14:543,45,0	1/1:17,0:17:13.04:273,13,0	0/0:30,0:30:84.90:0,85,730	1/1:24,0:24:53.79:417,54,0
chr10	88589133	.	T	TTA	3002.28	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=-12.031;DP=477;FS=0.430;HRun=0;HaplotypeScore=97.3393;InbreedingCoeff=0.6213;MQ=65.62;MQ0=4;MQRankSum=0.627;QD=20.29;ReadPosRankSum=-1.548;VQSLOD=3.3462;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:18.83:19,0,228	0/1:8,0:8:3.41:3,0,46	0/0:13,0:9:13.92:0,14,109	0/0:5,0:3:4.98:0,5,24	0/0:28,0:28:80.91:0,81,1013	0/0:14,0:14:40.30:0,40,525	0/0:22,0:22:47.80:0,48,498	1/1:1,16:20:56.99:810,57,0	0/0:5,0:5:10.53:0,11,41	0/1:24,0:24:14.20:14,0,130	0/0:24,0:24:39.95:0,40,245	0/0:10,0:10:26.89:0,27,353	0/0:16,0:16:42.41:0,42,169	0/0:24,0:23:56.78:0,57,640	0/0:18,0:18:23.95:0,24,177	0/0:9,0:9:23.52:0,24,90	0/0:24,0:24:37.16:0,37,225	0/0:20,0:20:50.94:0,51,649	0/0:21,0:21:25.18:0,25,179	0/0:18,0:18:46.09:0,46,197	1/1:2,7:9:21.07:403,21,0	0/0:7,0:7:20.99:0,21,253	0/0:20,0:20:52.93:0,53,210	0/1:4,0:4:12.38:12,0,24	1/1:17,0:17:32.44:125,32,0	1/1:2,16:18:41.82:761,42,0	0/0:31,0:31:55.84:0,56,304	1/1:0,22:22:54.19:1037,54,0
chr10	88589142	.	TTTAA	T	4595.48	PASS	AB=0.525;AC=13;AF=0.232;AN=56;BaseQRankSum=-8.167;DP=482;FS=8.239;HRun=0;HaplotypeScore=108.8568;InbreedingCoeff=0.8742;MQ=67.30;MQ0=4;MQRankSum=-3.449;QD=38.94;ReadPosRankSum=0.132;VQSLOD=4.9480;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.25:0,87,2169	0/0:11,0:11:33.11:0,33,836	0/0:16,0:12:14.95:0,15,520	0/0:6,0:4:9.03:0,9,176	1/1:3,22:25:57.19:940,57,0	1/1:1,13:14:42.14:749,42,0	1/1:0,18:18:36.12:653,36,0	0/0:20,0:20:57.20:0,57,1398	0/0:5,0:5:15.05:0,15,364	0/0:27,0:27:75.25:0,75,1880	0/0:21,0:21:63.22:0,63,1603	1/1:1,11:12:27.09:490,27,0	0/0:15,0:15:39.13:0,39,991	1/1:4,18:21:42.14:743,42,0	0/0:17,0:17:45.14:0,45,1094	0/0:9,0:9:24.08:0,24,619	0/0:25,0:25:75.26:0,75,1959	0/1:2,19:21:30.27:748,0,30	0/0:22,0:22:63.16:0,63,1541	0/0:15,0:15:39.12:0,39,961	0/0:9,0:9:27.09:0,27,705	1/1:0,6:6:15.05:272,15,0	0/0:21,0:21:63.22:0,63,1595	0/0:5,0:5:12.04:0,12,314	0/0:21,0:21:51.18:0,51,1312	0/0:19,0:19:57.20:0,57,1482	0/0:29,0:29:81.28:0,81,2061	0/0:21,0:21:54.18:0,54,1285
chr10	88589258	.	CG	C	3540.08	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.001;DP=581;FS=9.228;HRun=2;HaplotypeScore=75.3276;InbreedingCoeff=0.9991;MQ=71.68;MQ0=0;MQRankSum=-3.240;QD=36.12;ReadPosRankSum=-1.693;VQSLOD=3.0211;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.30:0,93,1372	0/0:10,0:10:30.09:0,30,425	0/0:14,0:13:36.12:0,36,528	0/0:16,0:13:38.99:0,39,520	0/0:13,0:13:39.11:0,39,548	0/0:27,0:27:78.26:0,78,1166	0/0:24,0:24:72.24:0,72,1077	1/1:0,22:22:66.20:839,66,0	0/0:18,0:18:54.15:0,54,763	0/0:21,0:21:51.17:0,51,761	0/0:15,0:15:42.14:0,42,626	0/0:20,0:20:60.19:0,60,863	0/0:17,0:17:51.16:0,51,738	0/0:25,0:25:75.25:0,75,1114	0/0:24,0:24:72.23:0,72,1042	0/0:23,0:23:69.22:0,69,1010	0/0:30,0:30:87.27:0,87,1280	0/0:25,0:25:72.24:0,72,1077	0/0:21,0:21:63.19:0,63,919	0/0:11,0:11:27.09:0,27,402	1/1:0,31:31:90.29:1167,90,0	0/0:18,0:18:51.17:0,51,760	0/0:9,0:9:27.05:0,27,376	0/0:24,0:24:72.24:0,72,1075	0/0:13,0:13:33.11:0,33,477	1/1:2,16:18:48.14:604,48,0	0/0:32,0:32:96.28:0,96,1368	1/1:1,26:27:72.23:931,72,0
chr10	88590716	.	CA	C	5682.74	PASS	AB=0.714;AC=25;AF=0.446;AN=56;BaseQRankSum=7.267;DP=487;FS=9.131;HRun=7;HaplotypeScore=53.0531;InbreedingCoeff=0.9081;MQ=76.80;MQ0=0;MQRankSum=-1.737;QD=26.19;ReadPosRankSum=2.835;VQSLOD=5.2855;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.17:0,57,702	1/1:1,9:10:24.05:245,24,0	0/0:22,0:22:7.94:0,8,485	0/0:17,0:16:32.32:0,32,433	0/0:40,0:40:99:0,114,1392	0/0:24,0:24:63.12:0,63,745	0/0:20,0:20:57.17:0,57,703	0/0:10,0:10:20.99:0,21,217	0/0:9,0:9:27.07:0,27,326	1/1:0,12:12:36.06:359,36,0	1/1:1,15:16:28.70:384,29,0	0/0:18,0:18:54.15:0,54,655	1/1:1,18:19:51.11:520,51,0	0/0:20,0:20:57.16:0,57,695	1/1:0,13:13:38.91:375,39,0	1/1:2,24:26:72.10:721,72,0	1/1:1,21:22:60.05:598,60,0	0/0:12,0:12:36.07:0,36,435	1/1:2,23:25:67.37:661,67,0	1/1:2,21:23:63.14:642,63,0	0/0:3,0:3:9.03:0,9,111	0/0:22,0:22:63.17:0,63,774	1/1:1,18:19:51.12:520,51,0	1/1:1,8:9:21.05:214,21,0	0/0:20,0:20:54.15:0,54,656	0/1:3,2:5:46.18:46,0,96	1/1:3,15:18:39.08:397,39,0	0/0:12,0:12:36.11:0,36,437
chr10	88590837	.	TTCTCTCTC	T	2334.53	PASS	AB=0.625;AC=15;AF=0.268;AN=56;BaseQRankSum=1.888;DP=503;FS=1.474;HRun=0;HaplotypeScore=161.7981;InbreedingCoeff=0.8070;MQ=57.06;MQ0=8;MQRankSum=-6.337;QD=18.68;ReadPosRankSum=-1.183;VQSLOD=2.9197;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:35.79:0,36,1292	0/0:5,0:7:9.03:0,9,275	0/0:29,0:14:9.03:0,9,225	0/0:39,0:20:0.83:0,1,582	1/1:14,14:29:21.05:374,21,0	1/1:3,8:11:21.07:415,21,0	1/1:7,9:17:21.07:415,21,0	0/0:20,0:21:30.10:0,30,976	0/0:12,0:18:12.04:0,12,438	0/0:25,0:26:48.15:0,48,1566	0/0:20,0:22:10.56:0,11,240	1/1:4,14:18:27.09:574,27,0	0/0:12,0:22:20.28:0,20,285	1/1:6,7:13:15.05:291,15,0	0/0:6,0:13:11.16:0,11,212	0/0:7,0:16:25.83:0,26,230	0/0:13,0:14:18.06:0,18,547	1/1:4,6:11:18.06:433,18,0	0/0:16,0:16:18.06:0,18,745	0/0:16,0:18:33.08:0,33,944	0/0:9,0:10:12.04:0,12,354	1/1:10,1:11:0.88:2,1,0	0/0:10,0:17:20.46:0,20,170	0/0:8,1:23:17.78:0,18,137	0/1:6,1:15:4.37:13,0,4	0/0:9,0:10:18.06:0,18,554	0/0:17,0:18:39.13:0,39,1421	0/0:4,0:15:27.09:0,27,869
chr10	88590875	.	ATGTGTGTGTG	A	1437.37	PASS	AB=0.910;AC=24;AF=0.480;AN=50;BaseQRankSum=3.908;DP=551;FS=31.878;HRun=0;HaplotypeScore=186.1141;InbreedingCoeff=0.3601;MQ=41.21;MQ0=22;MQRankSum=-5.052;QD=5.28;ReadPosRankSum=-2.980;VQSLOD=0.9463;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:8.29:0,8,535	0/0:6,0:6:3.01:0,3,30	./.	./.	1/1:18,0:19:2.26:69,2,0	1/1:16,0:22:9.03:210,9,0	0/0:21,0:20:3.38:0,3,109	0/1:29,0:26:0.97:1,0,128	0/0:20,0:18:12.04:0,12,596	0/1:14,0:12:59.34:59,0,370	0/0:17,0:19:10.34:0,10,197	0/1:16,0:19:19.39:129,0,19	1/1:15,4:20:15.05:388,15,0	1/1:10,0:13:2.29:6,2,0	1/1:15,3:20:11.95:199,12,0	1/1:13,3:16:8.23:83,8,0	0/0:6,0:12:26.43:0,26,403	./.	1/1:15,1:16:3.01:52,3,0	0/1:13,0:13:0.01:0,0,0	0/0:19,0:19:17.36:0,17,330	1/1:5,0:9:1.84:5,2,0	1/1:10,5:14:6.02:77,6,0	0/1:18,2:19:52.86:73,0,53	0/0:14,0:19:12.04:0,12,542	0/0:8,0:9:17.41:0,17,289	0/1:17,5:22:23.02:246,0,23	0/0:10,0:10:9.03:0,9,149
chr10	88591186	.	T	TA	6670.71	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-14.465;DP=555;FS=3.399;HRun=8;HaplotypeScore=52.2686;InbreedingCoeff=0.9901;MQ=75.25;MQ0=0;MQRankSum=-1.588;QD=29.00;ReadPosRankSum=-1.769;VQSLOD=4.5506;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:60:0,60,543	0/0:5,0:5:15.01:0,15,137	0/0:11,0:11:29.92:0,30,259	0/0:12,0:11:14.98:0,15,132	1/1:2,27:29:72.21:827,72,0	1/1:2,19:21:54.15:615,54,0	1/1:2,17:19:45.13:519,45,0	1/1:4,31:35:96.22:1068,96,0	0/0:21,0:21:51.01:0,51,461	0/0:21,0:21:54.03:0,54,494	0/0:30,0:30:78.04:0,78,714	1/1:3,16:19:48.14:554,48,0	0/0:15,0:15:42.02:0,42,384	1/1:1,16:17:42.12:485,42,0	0/0:12,0:12:35.99:0,36,322	0/0:19,0:19:54.03:0,54,494	0/0:21,0:21:60.01:0,60,545	1/1:2,20:22:60.18:692,60,0	0/0:22,0:22:50.99:0,51,459	0/0:24,0:24:63.01:0,63,571	1/1:2,8:10:24.07:277,24,0	1/1:0,19:19:51.15:588,51,0	0/0:29,0:29:78.04:0,78,714	0/0:10,0:10:30.02:0,30,275	0/0:24,0:24:69.03:0,69,631	1/1:3,12:15:11.65:387,12,0	0/0:24,0:24:63.03:0,63,576	1/1:5,19:24:57.17:658,57,0
chr10	88591686	.	C	CTCT	770.97	PASS	AB=0.887;AC=7;AF=0.125;AN=56;BaseQRankSum=7.143;DP=586;FS=56.061;HRun=0;HaplotypeScore=119.5838;InbreedingCoeff=-0.1533;MQ=51.26;MQ0=46;MQRankSum=-6.421;QD=4.79;ReadPosRankSum=0.328;VQSLOD=0.4848;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:29:48.16:0,48,763	0/0:6,0:6:9.03:0,9,160	0/0:13,0:6:18.05:0,18,305	0/0:13,0:8:21.07:0,21,348	0/0:8,0:8:12:0,12,177	0/0:15,1:15:30.06:0,30,501	0/0:42,0:40:96.33:0,96,1719	0/0:13,0:9:24.08:0,24,429	0/1:28,3:30:93.48:93,0,839	0/0:15,1:15:42.07:0,42,707	0/0:8,0:8:9:0,9,126	0/1:32,2:34:52.37:52,0,1433	0/1:19,4:21:40.79:41,0,484	0/0:52,1:52:49.76:0,50,2154	0/1:12,3:15:99:330,0,295	0/1:16,0:16:99:100,0,628	0/1:27,1:27:13.48:13,0,1001	0/0:23,0:23:54.18:0,54,1001	0/0:14,0:10:21.07:0,21,387	0/0:10,0:10:21.07:0,21,387	0/0:74,0:51:93.11:0,93,1697	0/0:8,0:7:9.03:0,9,168	0/0:9,0:9:18.05:0,18,304	0/0:27,0:27:54.19:0,54,1000	0/0:11,0:11:27.09:0,27,502	0/0:18,0:14:39.13:0,39,697	0/1:8,6:14:99:270,0,200	0/0:9,0:7:15.05:0,15,279
chr10	88592138	.	TAACC	T	20780.61	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.892;DP=576;FS=44.227;HRun=0;HaplotypeScore=104.6091;InbreedingCoeff=0.9913;MQ=76.19;MQ0=0;MQRankSum=-5.406;QD=40.04;ReadPosRankSum=6.165;VQSLOD=2.7425;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,37:37:72.25:1324,72,0	1/1:0,6:6:15.05:275,15,0	0/0:14,0:14:30.06:0,30,635	0/0:18,0:19:38.05:0,38,863	1/1:0,19:18:41.95:772,42,0	1/1:1,14:14:33.11:607,33,0	1/1:2,15:17:30.10:551,30,0	1/1:1,14:15:42.13:740,42,0	1/1:1,24:20:45.15:827,45,0	1/1:0,24:24:69.15:1142,69,0	1/1:2,18:20:42.11:770,42,0	1/1:4,16:16:30.10:551,30,0	1/1:1,25:22:57.20:1047,57,0	1/1:1,27:27:63.22:1158,63,0	1/1:3,22:23:54.19:993,54,0	1/1:1,19:20:51.17:938,51,0	1/1:2,22:21:54.18:993,54,0	1/1:0,15:15:42.14:772,42,0	1/1:2,15:16:39.01:636,39,0	1/1:0,22:22:60.21:1103,60,0	1/1:3,33:36:48.16:883,48,0	1/1:0,27:27:63.22:1158,63,0	1/1:0,9:9:24.08:441,24,0	1/1:0,9:9:21.07:386,21,0	0/0:24,0:24:72.25:0,72,1821	1/1:2,25:28:78.21:1338,78,0	1/1:2,17:19:45.15:827,45,0	1/1:1,11:12:30.10:551,30,0
chr10	88592692	.	A	ATAAT	32691.31	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-9.295;DP=587;FS=0.000;HRun=0;HaplotypeScore=73.7850;InbreedingCoeff=0.9760;MQ=70.82;MQ0=3;MQRankSum=-4.864;QD=61.33;ReadPosRankSum=2.815;VQSLOD=6.2992;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,11:14:33.11:883,33,0	1/1:0,8:8:21.07:564,21,0	0/0:14,0:14:29.18:0,29,388	0/0:8,0:7:12.25:0,12,220	1/1:5,38:45:99:2991,120,0	1/1:4,23:29:51.18:1346,51,0	1/1:2,15:19:39.13:1047,39,0	1/1:7,18:28:75.22:1833,75,0	1/1:0,15:15:27.09:726,27,0	1/1:2,18:22:63.17:1405,63,0	1/1:1,19:22:54.14:1385,54,0	1/1:0,14:14:36.12:967,36,0	1/1:2,19:22:57.20:1523,57,0	1/1:2,15:17:36.12:965,36,0	1/1:3,23:27:51.17:1331,51,0	1/1:1,15:17:42.14:1129,42,0	1/1:1,11:13:30.10:804,30,0	1/1:3,15:18:39.13:992,39,0	1/1:2,9:14:39.13:1011,39,0	1/1:3,30:33:96.24:2428,96,0	1/1:2,5:7:12.04:323,12,0	1/1:2,17:20:51.13:1280,51,0	1/1:2,22:26:63.22:1692,63,0	1/1:2,16:18:33.11:887,33,0	0/0:32,0:32:93.26:0,93,1637	1/1:1,21:23:63.21:1639,63,0	1/1:2,28:33:81.02:2170,81,0	1/1:0,20:25:51.18:1372,51,0
chr10	88594058	.	G	GTT	11452.72	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-12.894;DP=709;FS=3.482;HRun=2;HaplotypeScore=83.1766;InbreedingCoeff=0.9991;MQ=92.34;MQ0=0;MQRankSum=-6.515;QD=47.72;ReadPosRankSum=3.150;VQSLOD=4.9214;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,1832	0/0:10,0:10:27.09:0,27,397	0/0:28,0:28:84.20:0,84,1203	0/0:31,0:31:81.25:0,81,1165	0/0:25,0:25:75.21:0,75,1046	0/0:25,0:25:66.20:0,66,947	0/0:24,0:24:66.20:0,66,950	0/0:29,0:29:81.25:0,81,1141	0/0:23,0:23:69.21:0,69,993	0/0:21,0:21:60.19:0,60,859	0/0:23,0:23:59.90:0,60,824	0/0:21,0:21:60.16:0,60,842	1/1:2,36:38:99:1854,99,0	0/0:30,0:30:90.30:0,90,1325	1/1:1,29:30:78.27:1459,78,0	1/1:2,30:34:78.27:1462,78,0	0/0:17,0:17:48.16:0,48,707	0/0:11,0:11:33.11:0,33,485	1/1:2,18:20:57.20:1055,57,0	1/1:1,38:40:99:2119,117,0	0/0:28,0:28:78.17:0,78,1127	0/0:23,0:23:69.21:0,69,977	1/1:2,22:24:60.16:1087,60,0	1/1:1,22:23:60.21:1124,60,0	0/0:18,0:18:51.15:0,51,729	0/0:30,0:30:90.30:0,90,1307	1/1:1,30:31:69.24:1293,69,0	0/0:7,0:7:21.07:0,21,309
chr10	88594281	.	TCACACACACACACA	T	1218.08	PASS	AB=1.000;AC=18;AF=0.409;AN=44;BaseQRankSum=2.556;DP=501;FS=3.672;HRun=0;HaplotypeScore=190.6742;InbreedingCoeff=0.2542;MQ=68.33;MQ0=20;MQRankSum=-2.228;QD=6.66;ReadPosRankSum=-0.588;VQSLOD=2.2580;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:15.59:0,16,211	0/0:7,0:7:12.02:0,12,201	./.	./.	1/1:19,4:23:3.01:116,3,0	0/0:19,0:19:0.88:0,1,2	0/0:22,0:22:3.01:0,3,61	./.	0/0:7,0:11:6.01:0,6,79	0/0:23,0:22:15.05:0,15,432	0/0:7,0:7:3.01:0,3,76	./.	1/1:14,0:15:2.88:67,3,0	1/1:10,2:12:9.03:329,9,0	./.	1/1:14,0:14:3.01:116,3,0	0/0:18,0:17:3.01:0,3,62	0/1:16,0:15:29.21:29,0,117	1/1:12,0:12:2.96:114,3,0	./.	0/0:22,0:20:5.95:0,6,42	0/0:17,2:19:0:0,0,0	0/1:19,0:19:17.87:53,0,18	1/1:21,0:21:4.15:45,4,0	0/0:9,0:10:0:0,0,0	0/1:19,0:19:51.42:120,0,51	0/1:24,0:24:8.59:170,0,9	1/1:6,0:6:12.03:194,12,0
chr10	88594333	.	ACACACACACAC	A	897.88	PASS	AB=0.995;AC=12;AF=0.214;AN=56;BaseQRankSum=8.591;DP=515;FS=35.794;HRun=0;HaplotypeScore=180.5985;InbreedingCoeff=0.1414;MQ=50.27;MQ0=32;MQRankSum=0.175;QD=4.96;ReadPosRankSum=-0.649;VQSLOD=1.3155;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:27.72:0,28,165	0/0:6,0:5:7.31:0,7,38	0/0:23,0:12:36.12:0,36,486	0/0:18,0:12:33.10:0,33,431	0/1:23,0:23:9.10:9,0,598	0/0:16,0:15:31.65:0,32,410	0/0:20,0:17:42.14:0,42,568	0/0:17,0:15:22.71:0,23,250	0/0:20,0:18:24.27:0,24,158	0/0:22,0:21:28.02:0,28,532	0/0:16,0:14:20.74:0,21,260	0/0:13,0:13:24.08:0,24,324	0/1:20,0:18:36.50:36,0,118	0/1:12,0:11:99:154,0,216	0/0:24,0:23:4.33:0,4,15	0/1:12,0:12:5.77:66,0,6	0/0:20,0:17:27.69:0,28,379	0/0:22,0:20:14.09:0,14,668	0/1:9,0:8:46.90:63,0,47	0/0:16,0:16:6.92:0,7,51	0/0:22,0:20:15.10:0,15,81	0/0:15,0:15:33.11:0,33,443	0/1:13,0:13:2.31:53,0,2	1/1:27,2:28:4.58:78,5,0	0/0:13,0:12:30.10:0,30,447	0/1:29,0:29:99:117,0,316	0/1:22,1:23:31.95:179,0,32	1/1:8,3:10:6.04:292,6,0
chr10	88594344	.	C	CGA	9346.33	PASS	AB=0.958;AC=35;AF=0.625;AN=56;BaseQRankSum=-2.082;DP=556;FS=5.769;HRun=0;HaplotypeScore=95.2738;InbreedingCoeff=0.8582;MQ=61.72;MQ0=26;MQRankSum=0.824;QD=26.03;ReadPosRankSum=-0.380;VQSLOD=5.4262;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:26:8.20:466,8,0	1/1:4,0:3:3.01:39,3,0	0/0:27,0:16:30.13:0,30,466	0/0:25,0:19:39.16:0,39,576	0/0:26,0:26:57.09:0,57,683	0/0:20,0:19:45.14:0,45,557	0/0:19,0:17:45.14:0,45,559	1/1:23,0:22:48.16:729,48,0	1/1:24,0:22:30.41:645,30,0	1/1:21,0:20:48.72:733,49,0	1/1:19,0:17:42.09:599,42,0	0/0:14,0:14:30.09:0,30,368	1/1:23,0:22:5.16:547,5,0	0/0:11,0:11:27.05:0,27,300	1/1:24,0:23:44.94:701,45,0	1/1:13,0:13:30.10:455,30,0	1/1:18,0:15:36.08:497,36,0	0/0:21,0:21:24.66:0,25,480	1/1:10,0:9:21.07:336,21,0	1/1:23,0:23:11.18:642,11,0	0/1:22,1:22:3.86:404,0,4	0/0:19,0:19:42.09:0,42,502	1/1:12,0:12:15.05:229,15,0	1/1:7,21:27:2.37:19,2,0	0/0:15,0:14:33.06:0,33,393	1/1:32,0:32:54.11:1053,54,0	1/1:23,0:23:59.84:831,60,0	1/1:12,0:11:33.01:421,33,0
chr10	88595550	.	GA	G	7628.23	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=13.677;DP=588;FS=0.319;HRun=8;HaplotypeScore=65.7722;InbreedingCoeff=0.9202;MQ=70.54;MQ0=1;MQRankSum=0.792;QD=23.26;ReadPosRankSum=2.376;VQSLOD=5.5452;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:81.13:782,81,0	1/1:1,11:12:30:280,30,0	0/0:20,0:16:18.05:0,18,214	0/1:9,0:9:7.84:8,0,184	0/0:26,0:26:72.21:0,72,856	0/0:20,0:20:54.17:0,54,652	0/0:18,0:18:47.75:0,48,578	0/0:20,0:20:57.16:0,57,669	1/1:0,15:15:36.06:348,36,0	1/1:1,25:26:75.12:724,75,0	1/1:1,16:17:47.82:462,48,0	0/0:27,0:27:78.24:0,78,941	1/1:0,14:14:42.07:406,42,0	0/0:25,0:25:66.19:0,66,786	1/1:2,28:30:75.12:724,75,0	1/1:2,19:21:51.08:493,51,0	1/1:2,26:28:66.10:637,66,0	0/0:20,0:20:54.15:0,54,640	1/1:0,23:23:69.09:657,69,0	1/1:1,29:30:78.11:751,78,0	0/0:23,0:23:66.20:0,66,797	0/0:16,0:16:45.12:0,45,524	1/1:1,14:15:32.93:319,33,0	1/1:0,16:16:42.07:406,42,0	1/1:13,0:13:7.11:24,7,0	0/0:25,2:26:11.33:0,11,693	1/1:4,24:27:63.10:608,63,0	0/0:18,0:18:54.14:0,54,629
chr10	88595556	.	AAAT	A	369.31	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.066;DP=599;FS=2.679;HRun=0;HaplotypeScore=114.8466;InbreedingCoeff=0.9958;MQ=67.20;MQ0=1;MQRankSum=-0.133;QD=30.78;ReadPosRankSum=1.579;VQSLOD=4.2683;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:83.85:0,84,689	0/0:13,0:13:32.99:0,33,316	0/0:17,0:12:23.90:0,24,401	0/0:10,0:10:26.89:0,27,401	0/0:26,0:26:72.10:0,72,1512	0/0:20,0:20:57.18:0,57,1171	0/0:17,0:17:48.16:0,48,1017	0/0:22,0:22:66.20:0,66,1297	0/0:15,0:15:35.96:0,36,299	0/0:25,0:25:74.91:0,75,622	0/0:16,0:16:47.95:0,48,399	0/0:27,0:27:78.25:0,78,1622	0/0:14,0:14:41.95:0,42,349	0/0:26,0:26:72.20:0,72,1416	0/0:32,0:32:83.92:0,84,716	0/0:21,0:21:56.95:0,57,490	0/0:28,0:28:65.92:0,66,548	0/0:21,0:21:60.04:0,60,1113	0/0:24,0:24:71.37:0,71,582	0/0:32,0:31:92.29:0,92,787	0/0:22,0:22:66.20:0,66,1379	0/0:16,0:16:48.16:0,48,1003	0/0:15,0:15:35.80:0,36,323	0/0:19,0:19:50.95:0,51,445	1/1:0,12:12:30.10:464,30,0	0/0:28,0:27:78.20:0,78,1464	0/0:25,0:24:62.85:0,63,523	0/0:25,0:25:72.14:0,72,1265
chr10	88595840	.	AG	A	4032.07	PASS	AB=0.545;AC=7;AF=0.125;AN=56;BaseQRankSum=10.945;DP=736;FS=18.065;HRun=2;HaplotypeScore=70.4878;InbreedingCoeff=0.8317;MQ=63.79;MQ0=3;MQRankSum=-1.676;QD=35.06;ReadPosRankSum=-0.241;VQSLOD=1.7813;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,150,2160	0/0:6,0:6:15.05:0,15,225	0/0:20,0:16:44.72:0,45,533	0/0:22,1:17:39.56:0,40,526	0/0:22,0:22:66.21:0,66,968	0/0:26,0:26:78.26:0,78,1167	0/0:34,0:34:96.29:0,96,1377	1/1:0,28:28:84.25:1064,84,0	0/0:28,0:28:84.25:0,84,1201	0/0:24,0:24:69.22:0,69,1000	0/0:18,0:18:51.17:0,51,763	0/0:32,0:32:93.28:0,93,1367	0/0:36,0:36:99:0,108,1536	0/0:31,0:31:93.31:0,93,1374	0/0:33,0:33:99:0,99,1480	0/0:21,0:21:63.19:0,63,904	0/0:39,0:39:99:0,117,1693	0/0:26,0:26:78.21:0,78,1100	0/0:23,0:23:69.17:0,69,986	0/0:21,0:21:60.20:0,60,898	1/1:6,49:55:99:1997,156,0	0/0:20,0:20:60.19:0,60,878	0/0:11,0:11:33.11:0,33,494	0/0:37,0:37:99:0,111,1618	0/0:15,0:15:45.15:0,45,671	0/1:4,20:24:23.70:700,0,24	0/0:25,0:24:75.23:0,75,1081	1/1:0,8:8:21.07:272,21,0
chr10	88596742	.	G	GA	2093.08	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-11.685;DP=536;FS=10.339;HRun=6;HaplotypeScore=59.8836;InbreedingCoeff=0.9458;MQ=78.42;MQ0=0;MQRankSum=-0.480;QD=29.48;ReadPosRankSum=-1.603;VQSLOD=3.2369;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:87.18:0,87,879	0/0:8,0:8:21.05:0,21,214	0/0:13,0:13:33.05:0,33,325	0/0:12,0:11:23.67:0,24,211	0/0:23,0:23:63.14:0,63,642	0/0:25,0:24:75.17:0,75,765	0/0:20,0:20:37.23:0,37,448	1/1:4,27:31:81.25:1007,81,0	0/0:15,0:15:42.10:0,42,428	0/0:22,0:22:63.13:0,63,638	0/0:24,0:24:69.15:0,69,704	0/0:22,0:22:54.09:0,54,538	0/0:20,0:20:51.11:0,51,520	0/0:12,0:12:30.05:0,30,299	0/0:17,0:17:42.09:0,42,428	0/0:19,0:19:51.10:0,51,514	0/0:29,0:29:75.17:0,75,765	0/0:24,0:24:72.13:0,72,723	0/0:15,0:15:42.07:0,42,417	0/0:25,0:25:60.12:0,60,605	1/1:3,1:4:3.01:38,3,0	0/0:18,0:18:42.09:0,42,428	0/0:20,0:20:54.12:0,54,551	0/0:8,0:8:24.05:0,24,245	0/0:18,0:18:51.09:0,51,512	1/1:2,27:29:50.63:935,51,0	0/0:22,0:22:60.13:0,60,612	1/1:0,7:7:21.07:264,21,0
chr10	88596819	.	T	TA	7562.95	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=6.144;DP=473;FS=5.429;HRun=7;HaplotypeScore=60.7107;InbreedingCoeff=0.9544;MQ=72.46;MQ0=0;MQRankSum=-3.129;QD=31.64;ReadPosRankSum=0.090;VQSLOD=4.7285;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:96.23:1141,96,0	1/1:0,10:10:24.07:290,24,0	0/0:6,0:6:14.98:0,15,135	0/0:12,0:11:24:0,24,221	0/0:36,0:36:99:0,102,974	0/0:29,0:29:81.10:0,81,771	0/0:6,0:6:12.01:0,12,116	0/0:29,0:29:78.12:0,78,753	1/1:2,10:12:27.08:326,27,0	1/1:1,22:22:63.19:761,63,0	1/1:2,20:22:57.17:689,57,0	0/0:11,0:11:33.05:0,33,319	1/1:1,13:14:36.11:435,36,0	0/0:13,0:13:39.06:0,39,376	1/1:1,10:11:30.09:362,30,0	1/1:1,11:12:33.10:399,33,0	1/1:1,13:14:36.11:435,36,0	0/0:23,0:23:59.81:0,60,572	1/1:3,14:17:42.13:507,42,0	1/1:0,26:26:78.12:892,78,0	0/0:1,0:1:3:0,3,29	0/0:9,0:9:27.04:0,27,261	1/1:1,14:15:39.12:471,39,0	1/1:0,3:3:6.02:72,6,0	0/0:23,0:23:60.07:0,60,573	0/0:16,0:16:48.07:0,48,459	1/1:1,23:25:66.18:782,66,0	0/0:20,0:20:60.05:0,60,565
chr10	88597806	.	GGAAA	G	4014.50	PASS	AB=0.583;AC=13;AF=0.232;AN=56;BaseQRankSum=4.691;DP=574;FS=6.676;HRun=0;HaplotypeScore=106.8618;InbreedingCoeff=0.8509;MQ=57.65;MQ0=5;MQRankSum=2.710;QD=26.59;ReadPosRankSum=4.688;VQSLOD=3.1646;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:19.27:0,19,648	0/0:3,0:10:12.01:0,12,177	0/0:15,0:9:18.06:0,18,397	0/0:14,0:10:2.30:0,2,282	1/1:9,19:28:51.02:754,51,0	1/1:6,16:22:39.60:647,40,0	1/1:4,19:23:30.10:484,30,0	0/0:15,0:29:50.81:0,51,504	0/0:11,0:11:24.08:0,24,589	0/0:4,0:22:42.99:0,43,558	0/0:6,0:26:23.13:0,23,263	1/1:7,13:20:27.09:447,27,0	0/0:21,0:21:51.17:0,51,1108	1/1:7,16:23:42.14:696,42,0	0/0:16,0:16:42.13:0,42,958	0/0:20,0:20:42.12:0,42,890	0/0:15,0:37:14.64:0,15,143	0/1:4,10:14:24.05:184,0,24	0/0:22,0:22:42.11:0,42,909	0/0:26,0:26:60.18:0,60,1348	0/0:1,0:8:15.04:0,15,236	1/1:4,17:21:51.12:802,51,0	0/0:23,0:23:42.14:0,42,914	0/0:22,0:22:57.20:0,57,1291	0/0:22,0:22:36.12:0,36,795	0/0:10,0:22:38.12:0,38,567	0/0:17,0:17:30.10:0,30,730	0/0:7,0:21:36.04:0,36,596
chr10	88598381	.	A	AT	14817.13	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-16.358;DP=729;FS=8.507;HRun=1;HaplotypeScore=72.3161;InbreedingCoeff=1.0000;MQ=83.77;MQ0=0;MQRankSum=0.246;QD=41.62;ReadPosRankSum=4.371;VQSLOD=4.9399;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:31:81.27:1213,81,0	1/1:0,13:13:39.13:585,39,0	0/0:18,0:18:42.12:0,42,520	0/0:26,0:26:65.36:0,65,830	0/0:33,0:33:90.28:0,90,1153	0/0:22,0:22:66.21:0,66,856	0/0:17,0:17:51.15:0,51,647	0/0:29,0:29:87.26:0,87,1104	1/1:1,24:25:66.22:989,66,0	1/1:0,25:25:75.25:1123,75,0	1/1:0,29:29:81.23:1188,81,0	0/0:24,0:24:72.23:0,72,934	1/1:0,27:27:69.23:1032,69,0	0/0:25,0:25:66.21:0,66,855	1/1:1,37:38:99:1619,108,0	1/1:0,17:17:51.17:763,51,0	1/1:0,23:23:63.21:944,63,0	0/0:22,0:21:63.20:0,63,817	1/1:0,16:16:48.16:720,48,0	1/1:1,29:30:87.25:1271,87,0	0/0:23,0:23:63.18:0,63,802	0/0:30,0:30:84.27:0,84,1090	1/1:2,23:25:63.01:943,63,0	1/1:1,24:25:69.23:1034,69,0	0/0:31,0:31:93.29:0,93,1194	0/0:41,2:43:33.52:0,34,1415	1/1:0,32:32:93.32:1392,93,0	0/0:30,0:30:75.22:0,75,953
chr10	88598678	.	GA	G	5141.10	PASS	AB=0.778;AC=28;AF=0.500;AN=56;BaseQRankSum=2.446;DP=574;FS=8.921;HRun=11;HaplotypeScore=78.4542;InbreedingCoeff=0.8602;MQ=57.47;MQ0=8;MQRankSum=-0.282;QD=14.77;ReadPosRankSum=6.230;VQSLOD=4.7446;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:34:46.40:584,46,0	0/1:1,4:5:4.67:83,0,5	0/1:12,0:7:5.47:5,0,76	0/0:7,0:3:8.99:0,9,85	1/1:4,41:46:99:791,100,0	1/1:7,14:20:26.82:222,27,0	1/1:6,11:17:29.44:230,29,0	0/0:17,0:33:34.33:0,34,352	1/1:2,12:14:29.96:246,30,0	1/1:14,15:28:49.95:526,50,0	1/1:3,17:20:40.97:324,41,0	1/1:4,15:20:11.73:293,12,0	0/0:17,0:17:44.98:0,45,448	1/1:5,15:22:45.01:338,45,0	0/0:8,0:8:17.92:0,18,165	0/0:15,0:15:32.53:0,33,328	1/1:7,33:43:82.83:637,83,0	1/1:9,9:17:29.96:246,30,0	0/0:24,1:24:39.75:0,40,608	0/0:25,0:25:65.01:0,65,639	0/0:1,0:12:11.40:0,11,57	1/1:3,14:17:11.74:285,12,0	0/0:9,0:11:27.01:0,27,271	0/0:21,0:21:25.98:0,26,436	1/1:7,20:27:30.24:330,30,0	0/0:4,1:24:28.57:0,29,267	0/0:15,2:17:11.32:0,11,300	0/0:2,0:10:15.23:0,15,81
chr10	88598802	.	CG	C	11508.07	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=19.246;DP=653;FS=0.000;HRun=2;HaplotypeScore=121.7596;InbreedingCoeff=0.9988;MQ=82.91;MQ0=0;MQRankSum=-2.221;QD=34.98;ReadPosRankSum=3.105;VQSLOD=4.4288;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:63.20:816,63,0	1/1:0,7:7:21.07:272,21,0	0/0:20,0:19:51.14:0,51,719	0/0:32,0:32:84.28:0,84,1205	0/0:30,0:30:90.29:0,90,1323	0/0:48,0:47:99:0,126,1845	0/0:16,0:16:45.14:0,45,653	0/0:25,0:25:69.23:0,69,1015	1/1:0,19:19:45.15:583,45,0	1/1:0,27:27:72.22:918,72,0	1/1:2,26:28:73.12:935,73,0	0/0:17,0:17:51.17:0,51,760	1/1:1,17:18:48.15:621,48,0	0/0:24,0:24:66.21:0,66,966	1/1:0,16:16:33.11:427,33,0	1/1:0,23:23:66.21:856,66,0	1/1:0,33:33:96.27:1224,96,0	0/0:19,0:19:57.17:0,57,830	1/1:1,20:21:63.19:795,63,0	1/1:0,26:26:72.16:913,72,0	0/0:39,0:39:99:0,114,1684	0/0:29,0:29:87.27:0,87,1261	1/1:0,16:16:48.15:614,48,0	1/1:1,25:26:30.24:870,30,0	1/1:1,25:26:66.21:856,66,0	0/0:18,0:18:54.18:0,54,809	1/1:0,22:22:63.20:810,63,0	0/0:7,0:7:21.05:0,21,294
chr10	88600270	.	AT	A	16193.89	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-4.343;DP=637;FS=7.528;HRun=7;HaplotypeScore=68.9592;InbreedingCoeff=0.7328;MQ=81.12;MQ0=0;MQRankSum=-8.847;QD=26.25;ReadPosRankSum=5.084;VQSLOD=5.2695;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:66.15:673,66,0	1/1:0,18:18:51.12:520,51,0	0/0:20,0:20:28.85:0,29,557	0/1:14,0:14:6.04:6,0,311	1/1:2,40:42:99:1163,114,0	1/1:2,25:27:69.16:704,69,0	1/1:1,21:22:57.13:582,57,0	1/1:5,19:24:54.12:551,54,0	1/1:0,25:25:60.14:612,60,0	1/1:1,19:20:57.13:582,57,0	1/1:2,28:30:84.19:855,84,0	1/1:2,21:23:54.12:551,54,0	1/1:1,20:21:57.13:582,57,0	1/1:1,18:19:48.11:490,48,0	1/1:0,29:29:84.19:857,84,0	1/1:0,9:9:24.05:245,24,0	1/1:1,15:16:45.10:459,45,0	1/1:1,12:13:33.07:336,33,0	1/1:2,11:13:33.07:336,33,0	1/1:4,29:33:81.18:826,81,0	1/1:5,20:25:57.12:582,57,0	1/1:1,30:31:90.20:918,90,0	1/1:2,26:28:69.03:704,69,0	1/1:3,16:19:48.11:490,48,0	1/1:2,24:26:69.16:704,69,0	1/1:1,22:23:66.15:674,66,0	1/1:1,26:27:72.16:734,72,0	1/1:0,16:16:45.10:459,45,0
chr10	88602232	.	C	CT	3549	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-12.467;DP=614;FS=5.688;HRun=7;HaplotypeScore=67.9538;InbreedingCoeff=0.9809;MQ=66.05;MQ0=0;MQRankSum=0.824;QD=26.10;ReadPosRankSum=1.502;VQSLOD=4.4714;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:69.09:0,69,662	0/0:6,0:6:17.77:0,18,157	0/0:11,0:8:14.44:0,14,108	0/0:7,0:4:8.58:0,9,58	1/1:3,29:32:83.89:893,84,0	1/1:3,21:24:51.16:616,51,0	1/1:2,14:16:39.12:471,39,0	0/0:35,0:35:87.03:0,87,800	0/0:23,0:23:60.05:0,60,563	0/0:30,0:30:77.75:0,78,713	0/0:31,0:31:80.68:0,81,750	1/1:5,14:19:39.12:465,39,0	0/0:26,0:26:78.12:0,78,749	1/1:0,23:23:45:543,45,0	0/0:40,0:40:99:0,105,1000	0/0:23,0:23:66.06:0,66,620	0/0:22,0:22:57.07:0,57,543	1/1:0,8:8:21.06:254,21,0	0/0:30,0:30:72.10:0,72,692	0/0:28,0:28:81.11:0,81,776	0/0:8,0:8:24.02:0,24,226	1/1:4,10:14:27:307,27,0	0/0:19,0:19:51.07:0,51,488	0/0:14,0:14:39.05:0,39,371	0/0:18,0:18:54.08:0,54,516	0/0:36,0:36:87.10:0,87,829	0/0:31,0:31:93.10:0,93,877	0/0:9,0:9:18.03:0,18,174
chr10	88602774	.	ACCC	A	4552.06	PASS	AB=0.929;AC=27;AF=0.482;AN=56;BaseQRankSum=2.141;DP=475;FS=14.884;HRun=13;HaplotypeScore=83.1583;InbreedingCoeff=0.7827;MQ=69.43;MQ0=3;MQRankSum=-1.074;QD=16.20;ReadPosRankSum=7.385;VQSLOD=1.5567;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,18:37:43.16:488,43,0	1/1:3,3:6:8.99:109,9,0	0/0:21,0:19:26.65:0,27,402	0/0:12,0:10:15:0,15,182	1/1:11,3:15:20.30:215,20,0	1/1:6,10:16:17.97:219,18,0	1/1:10,10:22:32.84:364,33,0	0/0:6,0:12:1.24:0,1,3	1/1:13,13:27:10.92:357,11,0	1/1:8,8:17:23.91:261,24,0	1/1:9,9:21:26.72:254,27,0	1/1:3,13:17:32.99:383,33,0	0/0:6,0:8:2.91:0,3,24	1/1:10,17:27:38.99:474,39,0	0/0:20,0:27:28.98:0,29,241	0/1:12,1:13:20.85:21,0,122	1/1:13,12:28:59.73:638,60,0	1/1:5,11:18:41.86:442,42,0	0/0:8,0:9:10.18:0,10,75	0/0:11,0:13:8.98:0,9,73	0/0:15,0:19:16.22:0,16,157	1/1:6,11:17:27.07:328,27,0	0/0:9,0:9:5.99:0,6,49	0/0:15,0:17:5.79:0,6,174	0/0:12,0:13:1.25:0,1,3	0/0:10,0:12:11.96:0,12,110	0/0:11,0:16:23.44:0,23,192	0/0:3,0:5:10.19:0,10,86
chr10	88604305	.	A	AC	6795.49	PASS	AB=0.610;AC=50;AF=0.893;AN=56;BaseQRankSum=3.907;DP=603;FS=5.303;HRun=7;HaplotypeScore=139.9666;InbreedingCoeff=0.6638;MQ=73.36;MQ0=4;MQRankSum=-7.308;QD=12.92;ReadPosRankSum=3.270;VQSLOD=3.2211;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:30:60.18:723,60,0	1/1:9,0:8:23.13:201,23,0	0/0:42,0:32:71.99:0,72,677	0/0:35,0:27:59.90:0,60,556	1/1:27,0:27:21.85:145,22,0	1/1:14,1:15:21.01:215,21,0	1/1:15,0:14:12.01:127,12,0	1/1:11,1:25:35.51:256,36,0	1/1:1,14:14:30.09:362,30,0	1/1:21,11:30:71.58:759,72,0	1/1:24,3:27:74.46:686,74,0	1/1:14,0:14:5.98:55,6,0	1/1:14,1:16:16.99:155,17,0	1/1:21,0:21:8.86:104,9,0	1/1:11,0:25:19.39:183,19,0	1/1:9,11:23:26.75:297,27,0	1/1:24,0:24:53.91:542,54,0	1/1:11,0:10:23.89:226,24,0	1/1:7,15:24:30.88:498,31,0	1/1:13,0:26:18.71:146,19,0	0/1:9,3:22:0.27:40,0,0	1/1:22,0:22:8.94:76,9,0	0/1:4,7:13:0.35:90,0,0	1/1:8,4:12:12.80:118,13,0	1/1:15,0:15:13.14:109,13,0	1/1:3,0:13:17.43:100,17,0	1/1:7,14:30:45.83:477,46,0	1/1:2,0:15:17.27:107,17,0
chr10	88604312	.	CT	C	4010.67	PASS	AB=0.994;AC=34;AF=0.607;AN=56;BaseQRankSum=5.501;DP=601;FS=32.140;HRun=1;HaplotypeScore=146.5495;InbreedingCoeff=0.3450;MQ=68.13;MQ0=6;MQRankSum=-5.405;QD=9.50;ReadPosRankSum=4.709;VQSLOD=-0.3883;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:14.40:0,14,320	1/1:2,8:9:3.93:206,4,0	0/0:45,0:30:80.21:0,80,1052	0/0:34,0:24:72.16:0,72,926	1/1:3,16:20:23.81:274,24,0	1/1:4,8:16:21.47:209,21,0	1/1:0,6:10:9.89:95,10,0	0/1:20,1:19:8.57:9,0,176	0/0:16,0:15:20.25:0,20,146	1/1:19,15:32:33.76:725,34,0	1/1:7,22:29:34.63:752,35,0	1/1:0,3:11:5.97:47,6,0	0/1:18,0:18:19.79:102,0,20	1/1:1,8:20:8.86:79,9,0	0/1:25,0:25:5.97:6,0,87	0/1:25,0:25:68.82:75,0,69	1/1:4,23:27:23.47:575,23,0	1/1:1,10:10:11.24:283,11,0	1/1:21,0:21:19.83:211,20,0	0/1:23,0:23:35.28:35,0,38	0/0:21,0:21:29.06:0,29,191	1/1:0,9:20:8.94:68,9,0	0/1:12,0:12:7.60:8,0,17	0/1:13,0:11:5.38:51,0,5	1/1:8,6:14:2.98:147,3,0	0/0:14,0:14:28.16:0,28,225	0/1:37,0:36:56.68:57,0,128	0/0:15,0:15:3.29:0,3,73
chr10	88604316	.	C	CTG	4898.66	PASS	AB=0.888;AC=29;AF=0.518;AN=56;BaseQRankSum=5.018;DP=610;FS=0.388;HRun=0;HaplotypeScore=159.2756;InbreedingCoeff=0.1627;MQ=64.86;MQ0=6;MQRankSum=-6.443;QD=12.25;ReadPosRankSum=3.323;VQSLOD=4.5097;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:84.06:0,84,844	0/1:10,0:9:16.72:225,0,17	0/0:45,0:28:72.84:0,73,928	0/0:37,0:26:69.18:0,69,975	0/1:21,0:19:12.62:13,0,26	1/1:15,0:17:17.49:128,17,0	1/1:9,0:10:5.43:51,5,0	0/0:22,0:20:56.29:0,56,483	0/0:18,0:17:42.05:0,42,418	1/1:34,1:34:8.94:751,9,0	0/1:30,0:30:97.14:546,0,97	1/1:14,0:13:3:26,3,0	0/1:8,8:16:8.23:120,0,8	1/1:18,0:21:9:80,9,0	0/1:15,6:21:50.73:324,0,51	0/1:20,5:25:21.36:396,0,21	0/1:27,0:27:11.27:666,0,11	1/1:12,0:12:14.88:121,15,0	0/1:19,2:20:99:147,0,187	0/1:19,4:23:4.70:314,0,5	0/0:24,0:24:37.23:0,37,368	1/1:19,0:19:3:26,3,0	0/1:7,3:10:46.82:110,0,47	1/1:11,3:12:9.02:117,9,0	0/1:14,0:14:15.64:16,0,29	0/0:17,0:17:44.05:0,44,455	1/1:23,11:33:26.38:722,26,0	0/0:11,0:11:20.81:0,21,128
chr10	88604318	.	C	CTGTG	10083.46	PASS	AB=0.955;AC=39;AF=0.696;AN=56;BaseQRankSum=4.622;DP=672;FS=4.703;HRun=0;HaplotypeScore=209.3015;InbreedingCoeff=0.8588;MQ=59.93;MQ0=4;MQRankSum=-5.728;QD=21.73;ReadPosRankSum=1.933;VQSLOD=4.0736;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:59.94:0,60,1175	1/1:7,4:10:18.06:329,18,0	0/0:44,0:27:26.82:0,27,382	0/0:39,0:26:42.09:0,42,566	1/1:29,0:26:7.70:72,8,0	1/1:23,0:22:21.07:333,21,0	1/1:17,0:16:22.89:388,23,0	0/0:22,0:20:36.10:0,36,539	0/0:17,0:17:39.13:0,39,633	1/1:26,11:36:83.15:1375,83,0	1/1:19,11:30:45.39:923,45,0	1/1:27,0:25:30.07:468,30,0	1/1:13,0:13:11.71:189,12,0	1/1:26,0:25:20.92:354,21,0	0/1:20,1:21:44.88:509,0,45	1/1:24,1:25:42.13:779,42,0	1/1:14,14:28:57.17:1071,57,0	1/1:16,0:14:32.49:405,32,0	1/1:23,0:22:22.27:333,22,0	1/1:22,1:23:28.35:511,28,0	0/0:25,0:25:36.12:0,36,561	1/1:29,0:29:5.87:104,6,0	1/1:8,0:8:11.12:209,11,0	1/1:10,5:13:9.03:182,9,0	1/1:31,0:29:15:203,15,0	0/0:16,0:16:38.90:0,39,629	1/1:32,0:31:75.03:1345,75,0	0/0:9,0:9:15.03:0,15,188
chr10	88604561	.	CAT	C	2047.42	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=12.071;DP=796;FS=20.302;HRun=0;HaplotypeScore=159.3680;InbreedingCoeff=0.9998;MQ=80.13;MQ0=0;MQRankSum=-12.042;QD=33.02;ReadPosRankSum=0.834;VQSLOD=3.6875;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,39:39:99:1297,105,0	0/0:11,0:11:33.08:0,33,357	0/0:27,0:27:78.27:0,78,1495	0/0:32,0:32:96.33:0,96,1894	0/0:37,0:37:99:0,105,2109	0/0:23,0:23:69.24:0,69,1402	0/0:24,0:24:72.25:0,72,1460	0/0:34,0:34:96.18:0,96,1007	1/1:1,21:22:65.17:872,65,0	0/0:30,0:30:84.12:0,84,847	0/0:40,0:40:99:0,120,1337	0/0:32,0:32:93.30:0,93,1849	0/0:29,0:29:84.15:0,84,902	0/0:29,0:29:81.28:0,81,1646	0/0:33,0:33:99:0,99,1068	0/0:24,0:24:67.11:0,67,720	0/0:41,0:41:99:0,123,1343	0/0:22,0:22:63.22:0,63,1280	0/0:16,0:16:47.32:0,47,479	0/0:26,0:26:78.20:0,78,883	0/0:25,0:24:75.18:0,75,869	0/0:21,0:21:63.22:0,63,1256	0/0:29,0:29:87.22:0,87,958	0/0:45,0:45:99:0,129,1378	0/0:22,0:22:63.22:0,63,1268	0/0:34,0:34:99:0,102,1085	0/0:33,0:33:93.25:0,93,1088	0/0:15,0:15:42.11:0,42,486
chr10	88604565	.	AT	A	1588.89	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=11.827;DP=792;FS=22.744;HRun=1;HaplotypeScore=145.1835;InbreedingCoeff=0.9997;MQ=78.75;MQ0=0;MQRankSum=-11.361;QD=25.22;ReadPosRankSum=1.640;VQSLOD=2.0227;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,39:41:92.55:1029,93,0	0/0:11,0:11:33.11:0,33,525	0/0:27,0:27:78.27:0,78,1229	0/0:30,0:30:72.63:0,73,1339	0/0:36,0:36:99:0,102,1617	0/0:24,0:24:72.23:0,72,1128	0/0:23,0:23:69.24:0,69,1103	0/0:33,0:33:96.30:0,96,1469	1/1:0,21:21:58.53:681,59,0	0/0:31,0:31:90.30:0,90,1414	0/0:43,0:43:99:0,129,2026	0/0:31,0:31:93.32:0,93,1483	0/0:28,0:28:78.27:0,78,1240	0/0:29,0:29:81.28:0,81,1295	0/0:34,0:34:99:0,102,1600	0/0:26,0:26:78.27:0,78,1239	0/0:44,0:44:99:0,132,2072	0/0:21,0:21:63.21:0,63,1007	0/0:14,0:14:42.14:0,42,671	0/0:24,0:24:72.22:0,72,1105	0/0:24,0:23:72.23:0,72,1127	0/0:21,0:21:63.20:0,63,983	0/0:29,0:29:87.30:0,87,1382	0/0:42,0:42:99:0,120,1891	0/0:22,0:22:66.22:0,66,1051	0/0:35,0:35:99:0,105,1673	0/0:34,0:34:99:0,102,1565	0/0:13,0:13:33.09:0,33,502
chr10	88605744	.	AT	A	2382.35	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.975;DP=653;FS=1.933;HRun=8;HaplotypeScore=62.6587;InbreedingCoeff=0.9996;MQ=78.27;MQ0=1;MQRankSum=1.008;QD=24.31;ReadPosRankSum=2.228;VQSLOD=4.5900;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.24:0,87,1026	1/1:0,18:18:54.09:521,54,0	0/0:20,0:21:47.47:0,47,484	0/0:11,0:10:27.08:0,27,319	0/0:24,0:24:69.18:0,69,802	0/0:34,1:35:67.30:0,67,1083	0/0:19,0:19:54.17:0,54,652	0/0:34,0:34:96.28:0,96,1150	0/0:23,0:23:66.19:0,66,787	1/1:0,30:30:87.11:835,87,0	1/1:2,22:24:63.09:608,63,0	0/0:23,0:23:66.19:0,66,787	0/0:16,1:17:42.13:0,42,507	0/0:21,0:21:54.17:0,54,652	0/0:26,0:26:69.21:0,69,833	0/0:18,0:18:48.15:0,48,579	1/1:3,23:25:60.08:579,60,0	0/0:15,0:15:45.14:0,45,544	0/0:25,0:25:66.20:0,66,797	0/0:17,0:17:48.15:0,48,580	0/0:17,0:17:45.08:0,45,516	0/0:34,0:33:96.29:0,96,1158	0/0:18,0:18:51.15:0,51,610	0/0:22,0:22:66.19:0,66,787	0/0:19,0:19:45.14:0,45,544	0/0:32,2:34:35.32:0,35,992	0/0:33,0:33:99:0,99,1174	0/0:18,0:18:54.17:0,54,651
chr10	88606590	.	GTTTT	G	3163.69	PASS	AB=0.912;AC=20;AF=0.357;AN=56;BaseQRankSum=-2.499;DP=538;FS=0.390;HRun=12;HaplotypeScore=177.2045;InbreedingCoeff=0.5070;MQ=56.74;MQ0=16;MQRankSum=-1.181;QD=12.31;ReadPosRankSum=5.345;VQSLOD=-0.0285;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:16:22.15:0,22,372	1/1:9,0:9:3.51:130,4,0	0/0:30,0:14:28.51:0,29,275	0/0:22,0:10:8.56:0,9,51	0/0:26,0:27:12.15:0,12,367	0/0:12,0:14:25.27:0,25,272	0/0:9,0:10:20.42:0,20,250	0/1:31,0:31:55.05:55,0,283	0/0:20,0:19:38.80:0,39,498	0/1:27,0:24:99:215,0,247	0/1:26,0:26:99:205,0,197	0/0:13,0:12:25.07:0,25,261	0/1:11,4:15:0.30:310,0,0	0/0:8,0:7:20.79:0,21,279	1/1:13,8:21:44.59:453,45,0	1/1:6,6:12:29.84:283,30,0	0/1:14,0:14:48.52:49,0,169	0/0:18,0:16:18.10:0,18,242	1/1:15,6:19:38.67:452,39,0	0/1:16,0:30:36.45:158,0,36	0/0:19,0:18:7.98:0,8,256	0/0:6,0:6:6.83:0,7,25	1/1:11,6:16:22.87:404,23,0	1/1:6,2:8:14.67:142,15,0	0/0:25,0:24:61.17:0,61,606	0/0:35,0:34:14.44:0,14,533	1/1:14,12:25:47.94:504,48,0	0/0:14,0:14:39.98:0,40,409
chr10	88606593	.	T	TG	404.42	PASS	AB=0.833;AC=4;AF=0.071;AN=56;BaseQRankSum=0.002;DP=525;FS=4.242;HRun=0;HaplotypeScore=167.6964;InbreedingCoeff=-0.0345;MQ=52.36;MQ0=17;MQRankSum=-2.324;QD=6.32;ReadPosRankSum=2.369;VQSLOD=3.3785;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,8:15:12.84:319,0,13	0/0:10,0:10:26.39:0,26,187	0/0:30,0:13:30.38:0,30,292	0/1:23,0:7:1.35:1,0,13	0/0:27,0:26:21.09:0,21,291	0/0:14,0:14:0.04:0,0,79	0/0:10,0:10:17.92:0,18,169	0/0:30,0:30:83.06:0,83,799	0/1:10,9:18:53.59:173,0,54	0/0:24,0:21:58.13:0,58,443	0/0:26,0:26:68.58:0,69,476	0/0:14,0:13:29.05:0,29,182	0/0:16,0:16:41.96:0,42,265	0/0:8,0:7:20.62:0,21,135	0/0:20,0:20:48.77:0,49,359	0/0:12,0:12:20.37:0,20,159	0/0:12,0:12:29.40:0,29,232	0/0:17,0:15:13.08:0,13,202	0/0:19,0:17:50.46:0,50,370	0/0:30,0:30:58.60:0,59,413	0/0:19,0:18:50.82:0,51,516	0/1:7,0:7:2.81:3,0,54	0/0:17,0:16:40.45:0,40,264	0/0:9,0:9:18.26:0,18,104	0/0:26,0:24:18.58:0,19,163	0/0:33,0:32:91.67:0,92,999	0/0:24,0:23:46.49:0,46,371	0/0:14,0:14:42.11:0,42,515
chr10	88606595	.	T	TG	306.81	PASS	AB=0.886;AC=3;AF=0.054;AN=56;BaseQRankSum=1.837;DP=528;FS=5.825;HRun=0;HaplotypeScore=173.1054;InbreedingCoeff=-0.0599;MQ=49.33;MQ0=19;MQRankSum=-4.923;QD=7.30;ReadPosRankSum=1.667;VQSLOD=2.9290;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:20.46:0,20,135	0/0:9,0:9:21.70:0,22,158	0/0:31,0:12:34.18:0,34,265	0/0:24,0:6:5.20:0,5,28	0/0:27,0:26:27.22:0,27,316	0/0:14,0:14:2.66:0,3,93	0/0:10,0:10:17.92:0,18,168	0/0:28,0:28:79.43:0,79,744	0/0:19,0:18:29.36:0,29,227	0/0:23,0:21:53.64:0,54,428	0/0:26,0:26:67.45:0,67,486	0/0:13,0:12:28.56:0,29,167	0/0:16,0:16:15.87:0,16,209	0/0:8,0:7:20.61:0,21,136	0/0:20,0:20:45.64:0,46,323	0/1:12,0:12:9.68:10,0,122	0/0:12,0:12:29.36:0,29,234	0/0:17,0:15:30.17:0,30,227	0/0:21,0:19:46.18:0,46,324	0/0:29,0:29:70.22:0,70,486	0/0:21,0:18:47.80:0,48,492	0/1:5,0:5:5.38:5,0,21	0/0:17,0:16:25.61:0,26,253	0/0:9,0:9:14.87:0,15,82	0/1:12,13:23:59.94:379,0,60	0/0:32,0:31:89.68:0,90,978	0/0:28,0:27:48.55:0,49,376	0/0:15,0:15:42.57:0,43,518
chr10	88606598	.	T	TG	1571.96	PASS	AB=0.977;AC=17;AF=0.304;AN=56;BaseQRankSum=-0.382;DP=533;FS=10.416;HRun=0;HaplotypeScore=167.7142;InbreedingCoeff=-0.2311;MQ=48.35;MQ0=22;MQRankSum=1.041;QD=5.21;ReadPosRankSum=4.964;VQSLOD=2.2665;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:21.97:0,22,127	0/1:9,0:9:15.73:86,0,16	0/0:32,0:12:28.59:0,29,228	0/0:26,0:6:3.69:0,4,36	0/0:26,0:25:25.88:0,26,304	0/0:15,0:15:4.04:0,4,101	0/0:7,0:7:7.76:0,8,73	0/1:31,0:31:99:163,0,100	0/0:18,0:17:32.15:0,32,251	0/1:24,0:21:99:162,0,123	0/1:26,0:26:99:143,0,117	0/0:12,0:11:27.33:0,27,148	0/1:17,1:18:32.61:127,0,33	0/0:8,0:7:20.42:0,20,126	0/1:18,1:19:3.92:175,0,4	1/1:13,0:13:1.72:63,2,0	0/1:11,0:11:36.20:36,0,58	0/0:17,0:15:28.06:0,28,217	0/1:19,2:19:34.19:188,0,34	0/0:29,0:29:65.26:0,65,408	0/1:20,0:17:15.58:60,0,16	0/1:6,0:5:2.74:3,0,41	0/1:19,0:18:72.78:119,0,73	0/1:9,1:10:32.98:45,0,33	0/0:24,0:22:15.50:0,16,143	0/1:34,0:33:18.94:170,0,19	0/1:24,2:25:0.31:142,0,0	0/1:15,0:15:19.48:43,0,19
chr10	88606601	.	TTGTTG	T	8066.46	PASS	AB=0.990;AC=36;AF=0.643;AN=56;BaseQRankSum=-10.385;DP=536;FS=1.310;HRun=0;HaplotypeScore=173.7543;InbreedingCoeff=-0.2136;MQ=46.49;MQ0=23;MQRankSum=-1.485;QD=16.00;ReadPosRankSum=-6.174;VQSLOD=3.1094;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:88.75:172,0,89	1/1:8,0:8:20.76:176,21,0	0/1:35,0:11:39.85:40,0,106	0/1:26,0:5:1.32:19,0,1	0/1:26,1:26:11.31:354,0,11	0/1:15,0:15:15.02:383,0,15	0/1:7,0:7:62.53:76,0,63	0/1:31,0:32:99:202,0,132	0/0:17,0:16:4.14:0,4,138	0/1:25,0:21:63.25:318,0,63	0/1:26,0:26:8.25:349,0,8	0/1:12,0:11:1.20:189,0,1	1/1:17,1:18:46.88:591,47,0	0/1:8,0:7:19.68:20,0,94	1/1:17,0:17:42.10:654,42,0	1/1:12,2:14:33.01:526,33,0	0/1:11,0:11:37.08:105,0,37	0/1:15,1:14:19.42:254,0,19	1/1:19,0:17:46.91:607,47,0	1/1:31,0:30:71.90:755,72,0	0/1:20,0:17:8.86:9,0,255	1/1:5,1:5:7.28:157,7,0	1/1:19,0:18:52.22:693,52,0	1/1:10,0:10:20.17:244,20,0	0/1:24,0:22:52.47:303,0,52	0/1:33,0:32:16.85:17,0,478	1/1:27,0:26:56.94:855,57,0	0/0:15,0:15:20.59:0,21,375
chr10	88606602	.	TG	T	5233.66	PASS	AB=0.969;AC=52;AF=0.929;AN=56;BaseQRankSum=-0.074;DP=530;FS=0.000;HRun=1;HaplotypeScore=150.8067;InbreedingCoeff=0.1831;MQ=45.03;MQ0=23;MQRankSum=-0.346;QD=9.87;ReadPosRankSum=2.416;VQSLOD=2.6735;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:40.31:225,40,0	1/1:4,4:8:20.76:184,21,0	0/1:33,1:11:40.65:41,0,68	0/1:24,2:4:0.19:5,0,0	1/1:24,2:25:48.40:285,48,0	1/1:14,0:15:33.87:219,34,0	1/1:7,0:7:8.10:26,8,0	0/1:31,0:31:0.69:143,0,1	1/1:17,0:16:22.16:132,22,0	1/1:19,5:20:40.96:382,41,0	1/1:16,10:26:62.56:518,63,0	1/1:12,0:11:25.41:169,25,0	1/1:17,0:17:30.10:204,30,0	0/1:7,0:6:2.56:3,0,4	1/1:15,0:17:35.48:203,35,0	1/1:14,0:14:31.67:178,32,0	1/1:10,1:11:21.73:145,22,0	1/1:16,0:14:19.32:127,19,0	1/1:21,0:18:38.21:201,38,0	1/1:19,0:30:33.50:311,33,0	1/1:19,1:17:34.97:164,35,0	1/1:5,0:5:14.31:85,14,0	1/1:19,0:18:37.21:216,37,0	1/1:10,0:10:18.11:101,18,0	1/1:23,0:22:52.12:291,52,0	1/1:32,0:31:43.83:297,44,0	1/1:27,0:26:49.51:234,50,0	1/1:15,0:15:31.42:144,31,0
chr10	88606608	.	T	TTG	471.07	PASS	AB=0.963;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.535;DP=527;FS=0.550;HRun=0;HaplotypeScore=176.7894;InbreedingCoeff=-0.1817;MQ=42.11;MQ0=26;MQRankSum=-4.747;QD=4.17;ReadPosRankSum=1.605;VQSLOD=2.4347;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:33.45:0,33,341	0/0:8,0:8:20.18:0,20,160	0/0:33,0:8:21.06:0,21,130	0/0:29,0:5:2.94:0,3,18	0/1:26,0:25:38.73:39,0,137	0/1:14,0:14:26.14:26,0,90	0/1:6,0:6:13.65:14,0,32	0/0:33,0:33:71.48:0,71,512	0/0:17,0:16:27.94:0,28,297	0/0:25,0:20:45.43:0,45,339	0/0:31,0:31:77.26:0,77,579	0/0:9,0:8:14.47:0,14,104	0/1:19,0:19:9.88:10,0,178	0/0:7,0:6:17.75:0,18,117	0/0:16,0:16:5.15:0,5,61	0/0:14,0:14:8.28:0,8,21	0/0:11,0:11:24.37:0,24,198	0/0:15,0:13:1.62:0,2,130	0/0:25,0:20:26.40:0,26,132	0/0:30,0:29:0.16:0,0,211	0/0:15,0:12:29.60:0,30,163	0/1:6,0:5:19.97:20,0,27	0/1:19,0:18:13.11:13,0,70	0/0:9,0:9:7.62:0,8,59	0/1:15,8:21:54.83:474,0,55	0/0:30,0:29:39.25:0,39,379	0/0:27,0:26:14.59:0,15,151	0/0:15,0:15:7.88:0,8,163
chr10	88606615	.	TG	T	2937.46	PASS	AB=0.972;AC=47;AF=0.839;AN=56;BaseQRankSum=1.037;DP=529;FS=2.462;HRun=1;HaplotypeScore=149.6102;InbreedingCoeff=-0.0440;MQ=40.03;MQ0=24;MQRankSum=-2.603;QD=5.92;ReadPosRankSum=3.347;VQSLOD=0.8264;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:15:67.96:92,0,68	1/1:9,0:9:12.95:78,13,0	0/1:31,3:7:27.48:41,0,27	0/0:31,2:5:0.45:0,0,1	1/1:27,0:26:58.13:331,58,0	1/1:13,0:13:21.76:129,22,0	1/1:7,0:7:16.53:108,17,0	1/1:30,0:30:44.35:293,44,0	0/1:18,1:18:64.61:65,0,85	1/1:21,0:16:23.87:145,24,0	1/1:31,0:30:27.79:277,28,0	1/1:8,1:8:11.96:103,12,0	1/1:18,0:18:0.64:75,1,0	0/1:9,0:8:1.92:4,0,2	1/1:16,0:16:5.45:59,5,0	1/1:16,0:15:17.68:96,18,0	1/1:12,0:12:2.64:42,3,0	1/1:16,0:14:12.67:99,13,0	0/1:25,0:22:34.60:35,0,58	0/1:31,0:29:54.79:68,0,55	1/1:17,0:14:14.82:124,15,0	1/1:6,0:5:1.79:5,2,0	1/1:19,0:18:12.45:69,12,0	1/1:9,0:9:7.96:35,8,0	1/1:18,2:18:36.55:208,37,0	1/1:24,1:24:26.69:262,27,0	0/1:26,2:27:36.58:39,0,37	1/1:13,0:13:33.84:185,34,0
chr10	88606616	.	GTT	G	1631.03	PASS	AB=0.941;AC=22;AF=0.393;AN=56;BaseQRankSum=-0.769;DP=532;FS=0.425;HRun=9;HaplotypeScore=160.7781;InbreedingCoeff=-0.1850;MQ=41.55;MQ0=24;MQRankSum=0.710;QD=4.08;ReadPosRankSum=-3.116;VQSLOD=-0.4715;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:10.99:11,0,78	0/1:8,1:9:16.84:50,0,17	0/1:32,0:5:6.79:7,0,19	0/0:33,1:6:1.80:0,2,5	0/1:29,0:28:1.64:2,0,78	0/0:13,0:13:1.75:0,2,110	0/0:7,0:7:11.07:0,11,113	1/1:23,7:30:15.67:432,16,0	0/0:19,0:18:6.26:0,6,156	0/1:22,0:17:88.59:102,0,89	0/1:29,1:30:57.31:57,0,196	0/0:9,0:8:7.42:0,7,97	0/1:13,2:19:36.82:37,0,65	0/0:9,0:8:17.89:0,18,155	0/1:11,3:17:14.74:135,0,15	1/1:14,1:14:24.38:135,24,0	0/1:11,1:12:14.37:14,0,101	0/0:16,0:14:15.88:0,16,118	0/1:22,3:22:41.19:191,0,41	0/1:31,2:31:73.66:74,0,106	0/1:17,0:14:25.81:69,0,26	0/0:6,0:5:6.06:0,6,27	0/1:15,2:16:4.49:80,0,4	0/1:9,0:9:0.94:29,0,1	0/0:18,0:17:33.90:0,34,203	0/1:22,3:24:37.93:174,0,38	1/1:25,3:27:5.75:161,6,0	0/1:13,0:13:24.53:33,0,25
chr10	88606624	.	TG	T	3809.14	PASS	AB=0.977;AC=44;AF=0.786;AN=56;BaseQRankSum=0.504;DP=490;FS=1.087;HRun=1;HaplotypeScore=128.4104;InbreedingCoeff=0.4012;MQ=43.41;MQ0=20;MQRankSum=-4.363;QD=9.48;ReadPosRankSum=-0.646;VQSLOD=0.9067;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,1:12:27.35:186,27,0	1/1:7,0:7:7.93:68,8,0	0/1:31,2:5:32.87:33,0,38	0/0:31,1:7:1.14:0,1,2	1/1:24,0:23:34.08:288,34,0	1/1:12,0:12:24.24:190,24,0	0/1:6,0:6:6.94:63,0,7	0/1:26,1:27:36.87:115,0,37	1/1:12,2:13:29.38:178,29,0	1/1:19,0:15:33.88:179,34,0	1/1:28,1:28:68.07:404,68,0	1/1:8,1:8:20.46:133,20,0	1/1:20,0:20:33.78:240,34,0	1/1:6,1:6:8:39,8,0	1/1:17,0:17:31.27:169,31,0	1/1:18,0:17:41.49:264,41,0	1/1:11,0:11:21.17:115,21,0	1/1:12,0:10:18.82:120,19,0	1/1:24,0:21:22.84:181,23,0	1/1:31,0:29:52.09:282,52,0	0/0:17,0:15:5.75:0,6,235	0/1:4,0:3:5.20:18,0,5	1/1:18,0:17:35.48:179,35,0	1/1:8,0:8:1.70:60,2,0	1/1:13,0:11:27.76:124,28,0	0/0:25,0:25:2.33:0,2,290	1/1:26,0:25:36.89:181,37,0	0/0:14,0:14:14.36:0,14,209
chr10	88607855	.	GGTA	G	1444.26	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=1.738;DP=363;FS=5.947;HRun=0;HaplotypeScore=122.0661;InbreedingCoeff=0.2323;MQ=84.50;MQ0=6;MQRankSum=-3.378;QD=6.51;ReadPosRankSum=1.283;VQSLOD=2.5084;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.18:0,54,1194	0/0:8,0:8:3.88:0,4,57	0/0:34,0:24:51.40:0,51,1020	0/0:37,0:30:53.37:0,53,1210	1/1:4,4:8:9:111,9,0	1/1:0,11:11:9.03:126,9,0	1/1:8,0:8:6.76:55,7,0	0/0:11,0:11:6.31:0,6,43	0/0:5,0:5:8.16:0,8,168	0/1:21,0:21:12.34:12,0,70	0/1:15,0:15:33.43:33,0,39	1/1:7,5:12:29.03:360,29,0	0/1:18,0:18:43.86:44,0,56	1/1:5,1:6:15.89:177,16,0	0/1:11,0:11:17.79:20,0,18	1/1:11,0:11:7.87:31,8,0	0/1:17,0:15:4.26:4,0,50	1/1:7,1:8:24.04:331,24,0	0/0:7,0:7:5.29:0,5,30	0/1:20,0:20:39.70:102,0,40	0/1:13,0:12:12.32:12,0,37	1/1:2,1:3:8.66:69,9,0	1/1:6,0:6:2.71:22,3,0	0/1:15,0:15:6.85:7,0,16	1/1:3,2:5:6.02:93,6,0	0/0:16,0:17:14.87:0,15,96	0/1:10,0:10:7.18:10,0,7	0/1:4,0:4:1.41:3,0,1
chr10	88607870	.	G	GGA	4150.03	PASS	AB=0.739;AC=33;AF=0.589;AN=56;BaseQRankSum=4.426;DP=352;FS=1.176;HRun=0;HaplotypeScore=101.1034;InbreedingCoeff=0.7229;MQ=62.07;MQ0=46;MQRankSum=-4.555;QD=19.39;ReadPosRankSum=4.402;VQSLOD=4.0767;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:38.45:0,38,566	1/1:4,3:6:9.03:133,9,0	0/0:21,0:11:11.02:0,11,234	0/0:38,0:25:35.69:0,36,523	0/0:6,0:5:3.01:0,3,41	0/0:10,0:10:6.01:0,6,70	0/0:10,0:7:10.95:0,11,130	1/1:9,4:10:15:194,15,0	0/0:6,0:5:11.73:0,12,144	1/1:14,6:18:10.07:568,10,0	1/1:16,0:16:4.89:196,5,0	0/0:9,0:7:9.01:0,9,104	1/1:16,0:14:33.10:428,33,0	0/0:5,0:4:6.02:0,6,83	1/1:11,0:11:27.08:365,27,0	1/1:13,0:12:24.90:351,25,0	0/1:11,6:13:4.41:175,0,4	0/0:8,0:8:15.86:0,16,156	1/1:5,1:6:0.33:172,0,0	1/1:10,4:15:14.63:327,15,0	1/1:16,0:13:6.75:94,7,0	0/0:4,0:3:6.02:0,6,75	1/1:5,0:5:9.03:116,9,0	1/1:10,5:10:6.91:95,7,0	1/1:7,0:5:5.74:31,6,0	1/1:17,1:16:44.48:554,44,0	1/1:6,0:6:15.05:196,15,0	1/1:5,0:5:12.04:155,12,0
chr10	88607872	.	AG	A	3159.37	PASS	AB=0.699;AC=26;AF=0.464;AN=56;BaseQRankSum=6.221;DP=351;FS=3.385;HRun=2;HaplotypeScore=94.0640;InbreedingCoeff=0.2470;MQ=61.57;MQ0=50;MQRankSum=-3.101;QD=14.69;ReadPosRankSum=3.908;VQSLOD=3.6463;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:42.60:0,43,598	1/1:4,3:6:8.76:90,9,0	0/0:22,0:11:7.33:0,7,232	0/0:36,0:25:9.19:0,9,471	0/0:6,0:5:3:0,3,28	0/0:9,0:9:6.48:0,6,84	0/0:9,0:6:10.64:0,11,141	0/1:13,0:11:59.95:117,0,60	0/0:6,0:5:2.36:0,2,159	0/1:12,9:18:76.95:456,0,77	0/1:5,11:16:64.50:167,0,64	0/0:8,0:6:9.03:0,9,122	1/1:7,10:14:6.03:360,6,0	0/0:6,0:4:6.49:0,6,87	1/1:1,9:10:27.05:330,27,0	0/1:2,10:11:5.65:317,0,6	0/1:11,6:13:29.51:99,0,30	0/0:7,0:7:15.56:0,16,169	0/1:5,3:7:64.60:113,0,65	0/1:7,8:15:82.21:245,0,82	1/1:15,6:13:7.26:75,7,0	0/0:6,0:5:6.18:0,6,76	1/1:1,4:5:9.03:116,9,0	1/1:11,4:9:4.75:66,5,0	1/1:7,0:5:5.75:32,6,0	0/1:8,11:15:7.90:409,0,8	1/1:1,5:6:15.05:194,15,0	1/1:1,4:5:12.04:155,12,0
chr10	88607882	.	GGA	G	2564.42	PASS	AB=0.761;AC=30;AF=0.536;AN=56;BaseQRankSum=5.325;DP=296;FS=4.002;HRun=0;HaplotypeScore=77.9391;InbreedingCoeff=-0.2362;MQ=49.57;MQ0=60;MQRankSum=-4.382;QD=10.51;ReadPosRankSum=0.511;VQSLOD=3.0988;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:14:0.99:1,0,323	1/1:3,3:4:8.92:98,9,0	0/0:15,0:6:12.03:0,12,142	0/0:25,0:17:28.58:0,29,322	0/0:3,0:2:2.97:0,3,20	0/1:4,2:5:28.69:31,0,29	0/1:8,3:8:29.57:30,0,79	0/1:10,0:6:9.41:9,0,103	0/1:7,0:6:25.80:50,0,26	0/1:8,9:14:99:352,0,100	0/1:8,8:16:80.07:101,0,80	0/0:4,0:2:2.90:0,3,36	0/1:8,6:11:17.02:223,0,17	0/0:5,0:3:2.29:0,2,35	1/1:3,8:11:24.86:303,25,0	0/1:2,7:8:10.42:224,0,10	0/1:6,6:8:29.32:121,0,29	1/1:2,3:4:9.03:118,9,0	0/1:10,2:7:76.79:77,0,97	0/1:6,7:13:66.11:242,0,66	1/1:16,5:12:7.11:58,7,0	1/1:4,0:3:0.89:2,1,0	0/1:3,2:5:10.70:37,0,11	1/1:8,4:6:5.15:55,5,0	0/1:8,1:6:9.22:37,0,9	0/1:10,7:13:42.22:284,0,42	0/1:1,4:5:20:110,0,20	1/1:1,4:5:12.04:163,12,0
chr10	88607884	.	A	AG	2600.86	PASS	AB=0.986;AC=31;AF=0.554;AN=56;BaseQRankSum=6.012;DP=292;FS=4.036;HRun=2;HaplotypeScore=80.3310;InbreedingCoeff=-0.2131;MQ=48.80;MQ0=60;MQRankSum=-3.980;QD=10.75;ReadPosRankSum=1.735;VQSLOD=1.9793;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:14,2:13:16.17:16,0,277	1/1:6,0:4:8.92:98,9,0	0/0:15,0:6:12.03:0,12,142	0/0:23,0:16:29.18:0,29,321	0/0:2,0:1:2.97:0,3,20	0/1:5,0:4:28.73:33,0,29	0/1:10,0:7:28.29:28,0,83	0/1:10,0:6:25.16:25,0,89	0/1:7,0:6:26.71:49,0,27	0/1:17,0:14:60.75:352,0,61	0/1:16,0:16:78.77:101,0,79	0/0:4,0:2:2.90:0,3,33	0/1:14,0:11:11.61:259,0,12	0/0:4,1:3:2.34:0,2,33	1/1:11,0:11:24.44:302,24,0	1/1:9,0:8:10.58:232,11,0	0/1:12,0:8:30.88:122,0,31	1/1:5,0:4:9.02:107,9,0	0/1:12,0:7:69.70:77,0,70	0/1:14,0:14:2.57:233,0,3	1/1:21,0:12:6.35:56,6,0	1/1:5,0:4:0.47:2,0,0	0/1:5,0:5:15.03:35,0,15	1/1:11,0:5:2.25:39,2,0	0/1:8,1:6:11.52:38,0,12	0/1:17,0:13:19.76:284,0,20	0/1:5,0:5:21.96:110,0,22	1/1:5,0:5:12.04:163,12,0
chr10	88607969	.	AG	A	229.39	PASS	AB=1.000;AC=20;AF=0.370;AN=54;BaseQRankSum=3.943;DP=157;FS=4.896;HRun=2;HaplotypeScore=44.7668;InbreedingCoeff=0.4202;MQ=52.60;MQ0=7;MQRankSum=-1.794;QD=2.58;ReadPosRankSum=3.794;VQSLOD=-0.3258;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:33.10:0,33,449	1/1:2,0:2:4.26:41,4,0	1/1:11,0:3:2.48:20,2,0	0/0:8,0:3:12.04:0,12,147	0/0:1,0:1:3.01:0,3,40	0/0:1,0:1:3.01:0,3,41	0/0:5,0:5:9.03:0,9,126	0/0:2,0:2:1.55:0,2,4	0/0:4,0:3:9.03:0,9,126	1/1:13,0:13:11.96:97,12,0	./.	0/0:2,0:2:6.02:0,6,73	0/1:5,0:5:0.02:0,0,0	0/0:4,0:4:8.89:0,9,90	0/1:4,0:4:0.02:0,0,0	0/1:15,0:15:5.15:65,0,5	1/1:3,0:3:1.75:3,2,0	0/0:3,0:2:6.02:0,6,85	1/1:0,2:2:6.02:77,6,0	1/1:3,1:4:2.97:39,3,0	0/1:4,0:3:11.02:11,0,34	0/0:2,0:1:3.01:0,3,40	0/1:6,0:6:0.32:0,0,0	0/1:8,0:7:0:0,0,0	0/0:4,0:4:9.03:0,9,115	0/0:7,0:7:11.42:0,11,98	1/1:0,12:12:2.87:15,3,0	0/0:4,0:4:7.84:0,8,85
chr10	88607970	.	G	GGA	1298.90	PASS	AB=0.852;AC=26;AF=0.481;AN=54;BaseQRankSum=1.283;DP=166;FS=12.063;HRun=0;HaplotypeScore=47.4226;InbreedingCoeff=0.4080;MQ=52.46;MQ0=7;MQRankSum=-1.667;QD=12.49;ReadPosRankSum=3.766;VQSLOD=1.4734;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:24.42:0,24,263	1/1:2,2:4:5.99:90,6,0	1/1:13,0:4:3.89:23,4,0	0/0:8,0:3:12.03:0,12,141	0/0:1,0:1:3.01:0,3,39	0/0:1,0:1:1.82:0,2,5	0/0:5,0:5:9.50:0,10,118	1/1:2,0:2:2.73:12,3,0	0/0:4,0:3:6.26:0,6,19	1/1:13,0:13:20.88:331,21,0	./.	0/0:2,0:2:6.02:0,6,73	1/1:1,5:6:5.99:110,6,0	0/0:4,0:4:0.37:0,0,16	1/1:1,3:5:2.98:55,3,0	1/1:2,15:17:27.08:464,27,0	1/1:0,3:3:6.02:105,6,0	0/0:3,0:2:6.02:0,6,78	1/1:2,0:2:6.02:77,6,0	1/1:3,1:4:2.93:39,3,0	0/1:4,0:3:30.80:31,0,31	0/0:2,0:1:3.01:0,3,37	0/0:6,0:6:0:0,0,0	0/1:1,7:7:0:0,0,0	0/0:4,0:4:9.03:0,9,109	0/1:6,1:7:61.12:69,0,61	1/1:12,0:12:3.01:53,3,0	0/1:4,0:4:0.69:1,0,68
chr10	88607973	.	GGTGGAA	G	1490.98	PASS	AB=0.938;AC=28;AF=0.519;AN=54;BaseQRankSum=-7.151;DP=199;FS=1.541;HRun=0;HaplotypeScore=56.7764;InbreedingCoeff=-0.2254;MQ=52.15;MQ0=7;MQRankSum=4.065;QD=10.96;ReadPosRankSum=-6.528;VQSLOD=-0.2265;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:42.06:0,42,728	0/1:4,0:4:25.80:48,0,26	0/0:16,0:4:1.78:0,2,14	0/0:11,0:4:10.16:0,10,130	1/1:1,0:1:2.97:20,3,0	0/0:2,0:1:3.01:0,3,32	0/1:5,0:5:30.70:31,0,54	0/1:2,0:2:3.46:36,0,3	0/0:6,0:5:11.50:0,12,272	0/1:0,14:14:99:271,0,122	./.	0/1:2,0:2:10.26:19,0,10	0/1:7,0:7:56.63:89,0,57	0/1:5,0:5:69.35:69,0,72	0/1:7,0:7:23.24:141,0,23	0/1:18,0:18:82.12:82,0,217	0/1:4,0:4:41.14:41,0,57	0/1:3,0:2:17.98:18,0,24	1/1:3,0:3:7.27:95,7,0	1/1:8,0:8:8.99:136,9,0	1/1:8,0:7:14.73:196,15,0	1/1:2,0:1:3:25,3,0	0/1:0,6:6:0.01:0,0,0	1/1:8,0:7:2.96:49,3,0	0/1:4,0:4:1.84:2,0,45	0/1:8,0:8:57.81:117,0,58	0/1:13,0:13:8.05:112,0,8	0/1:4,0:4:16.32:46,0,16
chr10	88609024	.	A	AT	11264.42	PASS	AB=0.900;AC=33;AF=0.589;AN=56;BaseQRankSum=-16.564;DP=678;FS=0.945;HRun=8;HaplotypeScore=61.2627;InbreedingCoeff=0.9278;MQ=78.32;MQ0=0;MQRankSum=-2.071;QD=28.81;ReadPosRankSum=0.817;VQSLOD=5.0188;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.04:0,81,741	1/1:3,8:11:24.07:277,24,0	0/0:9,0:10:23.38:0,23,197	0/0:18,0:18:9.53:0,10,296	0/0:33,0:33:90.01:0,90,814	0/0:31,0:31:84.02:0,84,763	0/0:31,0:32:79.96:0,80,710	1/1:11,26:37:56.74:883,57,0	0/0:28,0:28:81.02:0,81,737	1/1:2,36:38:99:1268,111,0	1/1:2,18:20:54.16:623,54,0	0/0:30,0:30:77.99:0,78,699	1/1:1,27:28:53.77:873,54,0	0/0:24,0:24:69.01:0,69,622	1/1:4,20:24:60.18:693,60,0	1/1:2,22:24:57.17:658,57,0	1/1:3,22:25:51.15:589,51,0	0/1:8,1:9:7.58:8,0,193	1/1:3,8:11:24.06:267,24,0	1/1:2,28:30:84.21:955,84,0	1/1:0,15:15:39.12:450,39,0	0/0:26,0:26:72.04:0,72,659	1/1:1,27:28:81.24:929,81,0	1/1:3,25:28:75.22:866,75,0	0/0:26,0:26:66:0,66,599	1/1:2,24:26:72.21:831,72,0	1/1:4,27:31:78.22:889,78,0	1/1:0,6:6:18.05:208,18,0
chr10	88609708	.	CGTGT	C	354.03	PASS	AB=0.779;AC=7;AF=0.140;AN=50;BaseQRankSum=1.598;DP=455;FS=1.201;HRun=0;HaplotypeScore=85.6551;InbreedingCoeff=0.1846;MQ=64.90;MQ0=17;MQRankSum=1.403;QD=4.21;ReadPosRankSum=1.516;VQSLOD=1.8504;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:32:24:0,24,315	0/0:5,0:6:2.74:0,3,12	./.	./.	0/0:4,0:6:2.74:0,3,12	0/0:19,0:20:29.84:0,30,534	0/0:23,0:23:23.80:0,24,407	0/0:36,0:35:25.25:0,25,291	0/0:12,0:12:11.83:0,12,193	./.	1/1:5,2:7:3.01:47,3,0	0/1:4,3:8:34.90:35,0,41	0/0:6,0:10:6.02:0,6,119	0/0:12,0:15:5.74:0,6,37	0/0:9,0:9:2.99:0,3,24	0/0:9,0:17:3.01:0,3,53	1/1:27,10:37:14.01:317,14,0	0/1:21,1:21:43.98:44,0,241	0/0:20,0:19:13.29:0,13,219	0/0:8,0:8:3:0,3,63	0/0:16,0:15:12.01:0,12,167	0/1:6,0:9:25.52:35,0,26	0/0:8,0:8:3.01:0,3,62	0/0:20,0:17:6:0,6,120	0/0:8,0:8:12.02:0,12,194	0/0:18,0:18:14.96:0,15,221	0/0:20,0:19:7.25:0,7,114	0/0:11,0:11:12.01:0,12,207
chr10	88609851	.	G	GT	4566.44	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-4.373;DP=278;FS=12.110;HRun=8;HaplotypeScore=39.7008;InbreedingCoeff=0.9482;MQ=86.62;MQ0=0;MQRankSum=-0.582;QD=26.70;ReadPosRankSum=1.110;VQSLOD=4.5116;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39.01:0,39,356	1/1:0,4:4:12.04:138,12,0	0/0:15,0:15:26.99:0,27,240	0/0:7,0:7:12.64:0,13,92	1/1:0,14:15:38.92:389,39,0	1/1:0,7:8:23.90:257,24,0	1/1:0,5:5:12.04:138,12,0	1/1:3,9:12:27.07:301,27,0	0/0:8,0:8:21:0,21,189	1/1:1,9:10:27.06:300,27,0	1/1:3,10:13:30.02:330,30,0	1/1:1,7:8:21.06:240,21,0	0/0:9,0:9:24.01:0,24,220	1/1:2,9:11:27.08:307,27,0	0/0:5,0:5:15.01:0,15,137	0/0:8,0:8:18:0,18,165	1/1:2,9:11:18.05:208,18,0	1/1:0,6:6:18.05:208,18,0	0/0:12,0:12:27.01:0,27,247	0/0:4,0:4:9:0,9,82	1/1:1,11:12:33.06:366,33,0	1/1:2,5:7:9.03:104,9,0	0/0:3,0:3:6:0,6,55	0/0:11,0:11:30.02:0,30,274	1/1:1,11:12:33.10:381,33,0	1/1:4,10:14:30.09:346,30,0	0/0:11,0:11:27:0,27,247	1/1:7,16:23:48.14:554,48,0
chr10	88611969	.	GCA	G	5208.91	PASS	AB=0.776;AC=12;AF=0.214;AN=56;BaseQRankSum=14.879;DP=857;FS=0.000;HRun=0;HaplotypeScore=109.2198;InbreedingCoeff=0.7313;MQ=66.64;MQ0=2;MQRankSum=0.795;QD=23.78;ReadPosRankSum=1.790;VQSLOD=5.0100;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,32:39:81.09:981,81,0	0/0:13,0:13:39.13:0,39,621	0/0:29,0:26:35.96:0,36,824	0/1:28,0:19:8.71:9,0,358	0/0:31,0:31:84.29:0,84,1374	0/0:27,1:28:44.07:0,44,1230	0/0:34,1:36:53.07:0,53,1336	1/1:14,20:34:63.17:754,63,0	1/1:5,26:30:69.17:838,69,0	0/0:30,1:31:44.08:0,44,1237	0/0:30,0:30:75.26:0,75,1224	0/0:31,0:31:69.24:0,69,1127	0/0:44,1:45:89.21:0,89,1954	0/0:34,1:35:47.08:0,47,1288	0/0:52,3:55:41.91:0,42,2251	0/0:40,5:45:5.75:0,6,1632	0/0:28,1:31:12.74:0,13,1039	0/0:22,0:22:48.12:0,48,741	0/0:15,0:15:27.09:0,27,443	0/0:27,2:29:9.88:0,10,1195	1/1:3,37:44:99:1432,123,0	0/0:30,1:32:56.11:0,56,1411	0/0:20,0:20:2.14:0,2,550	0/0:38,1:39:99:0,108,1761	0/0:8,0:21:45.04:0,45,443	0/1:6,25:32:63.59:823,0,64	0/0:19,1:20:19.99:0,20,845	1/1:1,10:11:30.09:372,30,0
chr10	88613890	.	AGAGTT	A	25684.31	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=12.625;DP=587;FS=2.068;HRun=0;HaplotypeScore=129.3902;InbreedingCoeff=0.9937;MQ=74.69;MQ0=0;MQRankSum=-7.144;QD=59.18;ReadPosRankSum=5.407;VQSLOD=5.2672;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.23:0,81,2432	1/1:0,8:8:24.08:533,24,0	0/0:16,0:16:45.15:0,45,1277	0/0:12,0:12:36.12:0,36,1080	1/1:1,29:30:87.23:1733,87,0	1/1:1,33:34:84.29:1843,84,0	1/1:0,18:18:48.16:1036,48,0	0/0:37,0:37:99:0,108,3207	0/0:14,0:14:42.13:0,42,1236	1/1:0,22:22:63.22:1404,63,0	1/1:1,22:23:63.21:1299,63,0	1/1:0,25:25:63.22:1363,63,0	1/1:1,28:29:84.29:1865,84,0	1/1:0,24:24:60.21:1328,60,0	1/1:0,21:21:63.22:1364,63,0	1/1:0,20:20:57.20:1270,57,0	1/1:1,18:19:39.13:857,39,0	1/1:0,10:10:30.10:657,30,0	1/1:1,18:19:54.19:1187,54,0	1/1:0,27:27:78.27:1706,78,0	0/0:17,0:17:51.18:0,51,1600	1/1:0,14:14:39.13:838,39,0	1/1:0,28:28:78.27:1725,78,0	1/1:0,6:6:12.04:234,12,0	1/1:0,32:32:90.31:1905,90,0	0/0:20,0:20:60.20:0,60,1869	1/1:0,25:25:69.24:1536,69,0	0/0:7,0:7:21.07:0,21,677
chr10	88614013	.	T	TAGAAG	4033.55	PASS	AC=28;AF=0.636;AN=44;BaseQRankSum=7.676;DP=243;FS=0.647;HRun=0;HaplotypeScore=61.0353;InbreedingCoeff=0.7978;MQ=55.36;MQ0=51;MQRankSum=-5.016;QD=52.38;ReadPosRankSum=6.371;VQSLOD=3.6789;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:60.16:0,60,1255	./.	0/0:27,0:11:19.80:0,20,356	0/0:29,0:10:14.85:0,15,166	1/1:1,6:6:18.06:471,18,0	1/1:2,1:1:3.01:80,3,0	1/1:3,2:3:9.03:207,9,0	0/0:26,0:24:64.46:0,64,1353	0/0:8,0:6:18.06:0,18,407	./.	./.	1/1:1,6:6:18.06:480,18,0	1/1:1,6:6:18.06:479,18,0	1/1:0,1:1:3.01:80,3,0	1/1:1,2:2:6.02:159,6,0	1/1:2,2:2:6.02:160,6,0	./.	1/1:6,5:7:15.05:402,15,0	./.	1/1:0,4:4:12.04:320,12,0	0/0:3,0:2:6.02:0,6,90	1/1:1,2:2:6.02:160,6,0	1/1:0,7:7:18.06:477,18,0	1/1:4,1:1:3.01:79,3,0	./.	0/0:23,0:18:54.16:0,54,1115	1/1:2,6:7:18.06:478,18,0	0/0:15,0:10:30.10:0,30,675
chr10	88614139	.	GT	G	1523.51	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.797;DP=419;FS=1.059;HRun=9;HaplotypeScore=51.0893;InbreedingCoeff=0.9373;MQ=71.69;MQ0=0;MQRankSum=-2.589;QD=23.44;ReadPosRankSum=-0.037;VQSLOD=4.2642;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:81.22:0,81,922	1/1:0,2:2:6:55,6,0	0/0:16,0:16:18.03:0,18,301	0/0:12,0:12:6.08:0,6,242	0/0:19,0:19:51.14:0,51,575	0/0:13,0:13:39.12:0,39,450	0/0:11,0:11:32.93:0,33,360	0/0:24,0:24:60.17:0,60,684	0/0:10,0:10:27.08:0,27,312	1/1:0,18:18:50.98:458,51,0	1/1:0,19:19:54.02:494,54,0	0/0:13,0:13:39.12:0,39,450	0/0:11,0:11:33.10:0,33,381	0/0:19,0:19:57.17:0,57,657	0/0:20,0:20:60.14:0,60,677	0/0:17,0:17:51.15:0,51,588	1/1:0,10:10:30.02:274,30,0	0/0:11,0:11:30.09:0,30,345	0/0:14,0:14:39.12:0,39,448	0/0:20,0:20:60.18:0,60,690	0/0:14,0:14:36.11:0,36,415	0/0:9,0:8:24.07:0,24,277	0/0:17,1:18:26.73:0,27,561	0/0:6,0:6:12.04:0,12,138	1/1:0,16:16:45.02:412,45,0	0/0:15,1:16:14.66:0,15,423	0/0:19,0:19:57:0,57,611	0/0:9,0:9:27.08:0,27,312
chr10	88615832	.	A	AGTGTGTGTGTGTGT	7198.77	PASS	AB=0.695;AC=34;AF=0.630;AN=54;BaseQRankSum=-1.466;DP=497;FS=5.790;HRun=0;HaplotypeScore=168.7043;InbreedingCoeff=0.4641;MQ=57.11;MQ0=3;MQRankSum=-3.186;QD=21.81;ReadPosRankSum=-0.333;VQSLOD=3.5725;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:3.28:63,3,0	0/1:5,0:8:0:0,0,0	0/0:38,0:18:0.80:0,1,221	0/0:30,0:20:10.80:0,11,229	0/0:11,0:24:0.70:0,1,1	0/0:10,0:20:0.84:0,1,1	./.	1/1:22,0:18:18.02:194,18,0	1/1:16,0:24:8.70:205,9,0	1/1:10,0:18:36.12:1311,36,0	0/0:5,0:15:0:0,0,0	1/1:8,0:19:3.01:63,3,0	1/1:15,1:25:6.02:372,6,0	0/1:6,0:16:0:0,0,0	0/1:10,8:20:0:0,0,0	0/1:12,7:21:0:0,0,0	1/1:10,0:15:12.21:485,12,0	1/1:2,0:5:1.56:76,2,0	1/1:7,10:18:45.09:1541,45,0	0/1:9,5:15:0.01:0,0,0	0/0:10,0:18:0.37:0,0,0	1/1:7,0:7:12.03:237,12,0	0/1:11,3:14:0:0,0,0	0/0:7,4:14:0.46:0,0,1	1/1:13,0:13:2.94:18,3,0	1/1:10,1:20:45.07:1814,45,0	1/1:6,8:17:12.04:656,12,0	1/1:12,1:13:9.02:164,9,0
chr10	88615853	.	G	GTGTGT	808.45	PASS	AB=0.997;AC=15;AF=0.278;AN=54;BaseQRankSum=6.086;DP=427;FS=11.500;HRun=0;HaplotypeScore=111.1146;InbreedingCoeff=-0.1911;MQ=44.47;MQ0=7;MQRankSum=-2.459;QD=4.04;ReadPosRankSum=2.847;VQSLOD=1.5654;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:2.03:7,2,0	./.	0/0:36,0:12:1.16:0,1,229	0/1:29,0:12:6.97:7,0,261	0/0:23,0:23:17.82:0,18,245	0/0:22,0:21:12.04:0,12,163	0/0:5,0:5:6:0,6,82	0/1:31,0:27:69.55:70,0,596	0/1:20,0:18:35.90:36,0,148	0/1:13,0:13:99:177,0,248	0/0:9,0:9:3.01:0,3,41	0/0:16,0:16:5.94:0,6,66	0/1:15,0:14:15.67:16,0,68	0/0:13,0:13:8.97:0,9,123	0/0:14,0:13:9:0,9,122	0/0:14,0:14:9.01:0,9,122	0/0:14,0:14:8.97:0,9,122	0/1:6,0:7:99:101,0,107	0/1:12,0:12:99:127,0,192	0/0:14,0:14:5.92:0,6,82	0/0:14,0:14:12.51:0,13,164	0/1:10,0:10:81.50:82,0,100	0/0:14,0:14:8.92:0,9,122	0/0:12,0:12:3.01:0,3,41	0/1:14,0:13:5.95:6,0,110	0/1:14,0:13:99:158,0,285	0/1:11,0:11:99:126,0,120	1/1:5,3:11:6.41:42,6,0
chr10	88616155	.	A	ATGTG	5731.92	PASS	AB=0.800;AC=29;AF=0.537;AN=54;BaseQRankSum=-10.065;DP=478;FS=0.614;HRun=0;HaplotypeScore=99.5881;InbreedingCoeff=0.8189;MQ=53.92;MQ0=9;MQRankSum=1.567;QD=24.08;ReadPosRankSum=2.001;VQSLOD=4.3604;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:53.91:0,54,785	0/0:6,0:6:3.01:0,3,35	0/0:12,0:7:8.99:0,9,117	./.	1/1:8,13:23:26.62:590,27,0	1/1:9,14:24:7.88:697,8,0	1/1:5,9:14:8.95:217,9,0	0/0:48,0:48:50.65:0,51,680	0/0:10,0:11:8.51:0,9,253	0/0:27,0:26:31.29:0,31,324	0/0:18,0:18:27.01:0,27,307	1/1:5,8:13:15.05:361,15,0	1/1:1,10:14:12.04:290,12,0	1/1:6,12:22:29.56:548,30,0	1/1:5,5:10:12.03:289,12,0	1/1:1,9:10:15.05:361,15,0	0/0:21,0:21:30.21:0,30,325	1/1:5,6:11:12.04:289,12,0	0/1:12,4:14:34.93:205,0,35	1/1:5,13:19:15.05:361,15,0	0/0:7,0:5:12.04:0,12,186	1/1:3,5:8:6.02:144,6,0	1/1:3,12:16:23.79:517,24,0	1/1:4,12:17:24.08:577,24,0	0/0:4,0:12:15.02:0,15,140	0/0:9,0:9:24.03:0,24,333	1/1:5,10:18:14.30:287,14,0	0/0:25,0:24:54.07:0,54,755
chr10	88616935	.	AT	A	6125.47	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.825;DP=571;FS=2.122;HRun=1;HaplotypeScore=63.8363;InbreedingCoeff=0.9864;MQ=69.91;MQ0=0;MQRankSum=-2.007;QD=38.28;ReadPosRankSum=1.591;VQSLOD=5.5137;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:60.20:0,60,952	0/0:3,0:3:9.03:0,9,144	0/0:14,0:14:24.35:0,24,539	0/0:9,0:9:20.66:0,21,298	0/0:29,0:29:87.30:0,87,1376	0/0:32,0:32:96.31:0,96,1508	0/0:19,0:19:57.19:0,57,907	0/0:33,0:33:96.32:0,96,1509	0/0:18,0:18:51.17:0,51,807	0/0:30,0:30:87.29:0,87,1372	0/0:24,0:24:68.95:0,69,1080	0/0:19,0:19:57.19:0,57,911	1/1:0,15:15:33.11:462,33,0	0/0:16,0:16:48.16:0,48,768	1/1:0,23:23:69.23:965,69,0	1/1:0,17:17:45.15:629,45,0	0/0:23,0:23:69.24:0,69,1101	0/0:9,0:9:27.09:0,27,423	1/1:0,14:14:42.14:588,42,0	1/1:0,33:33:99:1384,99,0	0/0:15,0:15:45.15:0,45,719	0/0:24,0:24:72.25:0,72,1151	1/1:0,23:23:63.21:881,63,0	1/1:0,7:7:15.05:210,15,0	0/0:26,0:26:78.27:0,78,1240	0/0:26,0:26:78.27:0,78,1247	1/1:0,28:28:72.24:1007,72,0	0/0:22,0:22:66.23:0,66,1055
chr10	88619076	.	C	CGGTGGAG	7374.70	PASS	AB=0.962;AC=11;AF=0.196;AN=56;BaseQRankSum=-3.192;DP=781;FS=1.516;HRun=0;HaplotypeScore=181.7063;InbreedingCoeff=0.8833;MQ=82.87;MQ0=0;MQRankSum=-13.130;QD=51.57;ReadPosRankSum=-1.712;VQSLOD=4.4727;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,126,3037	1/1:8,8:17:33.11:1192,33,0	0/0:26,0:26:60.20:0,60,1436	0/0:22,0:22:57.16:0,57,1229	0/0:33,0:33:87.25:0,87,2014	0/0:30,0:30:75.26:0,75,1818	0/0:30,0:30:87.30:0,87,2107	0/0:29,0:29:53.29:0,53,1172	0/0:26,0:26:78.27:0,78,1909	1/1:15,18:34:66.23:2370,66,0	1/1:5,13:19:27.05:935,27,0	0/0:31,0:31:84.25:0,84,2027	0/0:26,0:26:72.21:0,72,1682	0/0:38,0:38:99:0,105,2502	0/0:38,0:38:99:0,102,2375	0/0:33,0:33:87.20:0,87,1968	1/1:12,8:21:33.10:1107,33,0	0/0:23,0:23:66.23:0,66,1636	0/0:17,0:17:45.15:0,45,1115	0/0:34,0:34:99:0,99,2448	0/0:35,0:35:87.30:0,87,2096	0/0:19,0:19:48.16:0,48,1190	0/0:34,0:34:90.22:0,90,2069	0/0:38,0:38:99:0,99,2430	1/1:8,18:27:45.15:1671,45,0	0/1:24,1:25:98.76:99,0,1109	0/0:22,0:22:60.16:0,60,1411	0/0:5,0:5:15.03:0,15,320
chr10	88619490	.	GAGAAACATGAT	G	9692.65	PASS	AB=0.529;AC=11;AF=0.196;AN=56;BaseQRankSum=14.911;DP=687;FS=5.638;HRun=0;HaplotypeScore=221.8201;InbreedingCoeff=0.8845;MQ=86.84;MQ0=0;MQRankSum=-12.892;QD=75.14;ReadPosRankSum=2.004;VQSLOD=4.4320;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,36:44:96.33:3352,96,0	0/0:11,0:11:33.11:0,33,1847	0/0:28,0:28:78.26:0,78,3799	0/0:26,0:26:77.63:0,78,3390	0/0:25,0:25:72.25:0,72,3984	0/0:35,0:35:96.33:0,96,4948	0/0:18,0:18:54.19:0,54,2745	1/1:6,23:29:69.04:1811,69,0	1/1:1,15:16:45.15:1572,45,0	0/0:32,0:32:96.32:0,96,5240	0/0:23,0:23:54.19:0,54,2965	0/0:34,0:34:93.32:0,93,4894	0/0:29,0:29:81.28:0,81,4147	0/0:22,0:22:63.22:0,63,3368	0/0:41,0:41:99:0,120,6598	0/0:29,0:29:84.27:0,84,4537	0/0:19,0:19:54.16:0,54,2901	0/0:17,0:17:48.16:0,48,2403	0/0:22,0:22:63.22:0,63,3464	0/0:27,0:27:72.25:0,72,3640	1/1:4,10:14:18.06:575,18,0	0/0:21,0:21:60.16:0,60,3116	0/0:14,0:14:42.14:0,42,2247	0/0:29,0:29:81.28:0,81,4027	0/0:22,0:22:51.18:0,51,2742	0/1:2,16:18:35.76:1545,0,36	0/0:34,0:34:99:0,102,5350	1/1:0,8:8:24.08:838,24,0
chr10	88621870	.	ATGTG	A	1545.61	PASS	AB=0.899;AC=15;AF=0.278;AN=54;BaseQRankSum=0.800;DP=671;FS=7.271;HRun=0;HaplotypeScore=143.9380;InbreedingCoeff=0.6162;MQ=62.48;MQ0=6;MQRankSum=2.158;QD=7.54;ReadPosRankSum=4.640;VQSLOD=2.0680;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:28:9.03:0,9,167	0/0:5,0:6:3.01:0,3,48	./.	0/0:22,0:11:0:0,0,0	1/1:14,16:32:17.35:385,17,0	1/1:9,9:20:18.05:261,18,0	0/1:13,9:23:8.55:128,0,9	0/0:32,0:31:12.50:0,13,164	0/0:15,0:25:36.09:0,36,591	0/0:32,0:32:43.29:0,43,701	0/0:12,0:18:6:0,6,72	1/1:15,9:24:9.02:121,9,0	0/0:19,0:19:5.99:0,6,89	1/1:10,9:20:15.05:233,15,0	0/0:18,0:29:15.05:0,15,245	0/0:18,0:34:6:0,6,76	0/0:16,0:15:3.01:0,3,43	0/1:10,0:10:9.97:41,0,10	0/0:7,0:7:9.03:0,9,169	0/0:25,0:34:5.75:0,6,60	0/0:35,0:34:21.77:0,22,223	1/1:13,15:28:20.92:326,21,0	0/0:25,0:25:20.30:0,20,220	0/1:13,0:21:0.10:0,0,0	1/1:15,0:26:24.03:223,24,0	0/0:32,0:32:57:0,57,732	0/0:13,0:22:15.49:0,15,197	0/0:10,0:21:9.03:0,9,156
chr10	88621893	.	T	TGTGTGTGT	2341.91	PASS	AB=1.000;AC=29;AF=0.604;AN=48;BaseQRankSum=-8.142;DP=656;FS=22.467;HRun=0;HaplotypeScore=172.9035;InbreedingCoeff=0.6096;MQ=51.45;MQ0=22;MQRankSum=-0.939;QD=6.21;ReadPosRankSum=-3.515;VQSLOD=0.5361;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:24:2.29:43,2,0	1/1:5,0:5:3.01:104,3,0	./.	./.	0/0:30,0:29:28.80:0,29,476	0/0:22,0:22:18.06:0,18,326	0/0:27,0:26:8.88:0,9,121	1/1:35,0:31:4.64:12,5,0	1/1:22,0:22:5.04:122,5,0	1/1:27,0:27:15.94:340,16,0	./.	0/0:25,0:24:9.03:0,9,167	1/1:11,5:16:1.81:5,2,0	0/0:16,0:16:14.26:0,14,230	1/1:25,0:24:12.02:332,12,0	1/1:31,0:31:3.01:121,3,0	./.	0/0:11,0:11:3.01:0,3,55	1/1:11,0:9:0.94:2,1,0	0/1:34,0:34:0:0,0,0	1/1:28,0:27:15.04:264,15,0	0/0:37,0:36:21.31:0,21,373	1/1:27,0:27:20.56:370,21,0	0/1:20,0:19:0.05:1,0,0	0/0:21,0:21:24.08:0,24,380	1/1:30,0:30:34.75:482,35,0	1/1:19,0:19:6.02:226,6,0	0/1:20,0:20:6.82:79,0,7
chr10	88624625	.	GA	G	16468.35	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.089;DP=575;FS=1.110;HRun=6;HaplotypeScore=57.6409;InbreedingCoeff=0.9927;MQ=70.11;MQ0=0;MQRankSum=-6.162;QD=29.57;ReadPosRankSum=3.973;VQSLOD=5.4079;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:45.11:484,45,0	1/1:0,10:10:27.07:290,27,0	0/0:11,0:11:21.03:0,21,229	0/0:7,0:7:18.03:0,18,198	1/1:2,30:32:87.13:920,87,0	1/1:0,18:18:51.13:548,51,0	1/1:1,18:19:48.12:514,48,0	1/1:1,28:29:84.17:885,84,0	1/1:0,20:20:57.14:613,57,0	1/1:0,34:34:99:1055,99,0	1/1:3,23:26:66.16:709,66,0	1/1:0,16:16:42.11:451,42,0	1/1:2,17:19:48.12:516,48,0	1/1:0,22:22:60.15:645,60,0	1/1:0,26:26:78.20:838,78,0	1/1:0,16:16:42.11:451,42,0	1/1:0,12:12:36.09:387,36,0	1/1:0,12:12:33.08:355,33,0	1/1:0,17:17:51.13:548,51,0	1/1:1,30:31:90.23:967,90,0	1/1:1,16:17:45.11:484,45,0	1/1:1,20:21:57.14:613,57,0	1/1:0,16:16:45.08:472,45,0	1/1:0,13:13:33.08:355,33,0	1/1:0,31:31:87.15:921,87,0	1/1:1,29:30:84.21:902,84,0	1/1:0,37:37:99:1062,99,0	1/1:1,16:17:45.11:484,45,0
chr10	88625178	.	AC	A	25858.60	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.174;DP=737;FS=5.890;HRun=1;HaplotypeScore=128.3006;InbreedingCoeff=0.9916;MQ=82.50;MQ0=0;MQRankSum=-10.587;QD=37.37;ReadPosRankSum=5.120;VQSLOD=4.1231;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:41:99:1468,105,0	1/1:0,5:5:15.05:209,15,0	0/0:19,0:19:49.56:0,50,772	0/0:26,0:26:69.19:0,69,1037	1/1:0,23:23:57.10:750,57,0	1/1:0,20:20:54.14:733,54,0	1/1:0,17:17:42.14:587,42,0	1/1:0,34:34:96.28:1284,96,0	1/1:0,27:27:66.22:923,66,0	1/1:1,16:17:51.17:708,51,0	1/1:0,16:16:45.11:607,45,0	1/1:0,35:34:90.30:1253,90,0	1/1:0,48:48:99:1799,129,0	1/1:0,28:28:78.26:1084,78,0	1/1:0,35:35:99:1379,99,0	1/1:0,19:19:57.19:797,57,0	1/1:0,24:24:69.23:959,69,0	1/1:0,12:12:30.10:420,30,0	1/1:0,17:17:48.11:630,48,0	1/1:0,30:30:87.25:1184,87,0	1/1:0,35:35:99:1385,99,0	1/1:0,31:31:84.28:1175,84,0	1/1:0,26:26:69.23:965,69,0	1/1:0,22:22:48.12:649,48,0	1/1:0,37:37:99:1427,102,0	1/1:0,40:40:99:1597,117,0	1/1:0,32:32:75.25:1048,75,0	1/1:0,21:21:60.20:839,60,0
chr10	88625291	.	T	TATACACC	13596.62	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-3.733;DP=734;FS=2.429;HRun=0;HaplotypeScore=170.1821;InbreedingCoeff=0.2560;MQ=55.24;MQ0=50;MQRankSum=-3.660;QD=20.00;ReadPosRankSum=1.737;VQSLOD=4.0521;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:34:32.94:423,33,0	0/1:17,0:13:7.25:163,0,7	0/0:24,0:14:39.12:0,39,749	0/0:30,0:24:63.87:0,64,1243	1/1:28,0:28:4.79:291,5,0	1/1:2,0:35:3.01:102,3,0	0/1:24,0:21:36.66:220,0,37	1/1:31,0:26:42.16:656,42,0	1/1:22,0:21:32.06:209,32,0	0/1:24,0:21:4.89:666,0,5	1/1:16,0:16:15.88:280,16,0	1/1:2,0:38:6.02:205,6,0	1/1:3,19:28:45.07:1628,45,0	1/1:2,0:35:8.66:171,9,0	1/1:9,25:35:54.19:2143,54,0	1/1:8,16:23:14.42:689,14,0	0/1:17,0:15:11.37:178,0,11	0/1:9,0:9:70.24:70,0,92	1/1:10,1:10:27.05:446,27,0	1/1:7,23:36:29.01:1107,29,0	1/1:34,0:33:10.34:289,10,0	1/1:5,0:40:0.38:98,0,0	1/1:8,11:20:15.05:611,15,0	1/1:17,3:16:23.87:641,24,0	1/1:4,0:24:12.02:332,12,0	1/1:27,0:22:32.19:366,32,0	1/1:3,16:20:39.07:1561,39,0	1/1:10,0:8:12.03:52,12,0
chr10	88625292	.	A	ATACAC	10591.78	PASS	AB=0.994;AC=45;AF=0.804;AN=56;BaseQRankSum=0.596;DP=709;FS=0.494;HRun=0;HaplotypeScore=159.8735;InbreedingCoeff=0.1090;MQ=54.50;MQ0=50;MQRankSum=-2.897;QD=16.22;ReadPosRankSum=5.606;VQSLOD=4.3633;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:35:60.93:678,61,0	0/1:16,0:12:33.55:136,0,34	0/0:24,0:14:38.65:0,39,749	0/0:31,0:26:63.45:0,63,1242	0/1:28,0:28:82.37:82,0,85	1/1:32,0:30:3.01:76,3,0	0/1:23,0:20:60.87:99,0,61	1/1:32,0:26:66.55:796,67,0	1/1:22,0:21:38.73:349,39,0	0/1:24,0:21:99:537,0,202	1/1:16,0:16:3.01:250,3,0	1/1:36,0:35:6.02:153,6,0	1/1:30,0:29:14.77:964,15,0	1/1:34,0:33:7.73:91,8,0	1/1:34,2:34:54.19:1402,54,0	0/1:22,1:21:38.03:459,0,38	0/1:17,0:15:34.03:138,0,34	0/1:10,0:10:57.55:58,0,183	1/1:10,1:10:20.72:368,21,0	1/1:30,1:31:13.09:748,13,0	1/1:34,0:33:56.57:521,57,0	1/1:38,0:36:3.29:88,3,0	1/1:22,0:17:15.05:383,15,0	1/1:21,0:17:6.50:391,6,0	1/1:22,0:19:8.11:227,8,0	1/1:28,0:23:47.17:517,47,0	1/1:19,1:19:38.96:972,39,0	1/1:10,0:8:14.90:108,15,0
chr10	88625296	.	A	AC	4660.70	PASS	AB=0.829;AC=33;AF=0.589;AN=56;BaseQRankSum=6.258;DP=716;FS=5.971;HRun=1;HaplotypeScore=140.3331;InbreedingCoeff=-0.1780;MQ=51.55;MQ0=50;MQRankSum=-1.457;QD=7.35;ReadPosRankSum=8.068;VQSLOD=1.7638;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,30:39:75.89:1046,76,0	0/1:8,8:12:41.87:42,0,78	0/0:24,0:14:30.10:0,30,381	0/0:31,0:23:60.66:0,61,750	0/0:17,10:27:14.69:0,15,162	1/1:32,2:32:1.24:4,1,0	0/1:10,13:20:21.39:21,0,115	1/1:4,25:23:54.55:661,55,0	1/1:5,19:22:36.12:535,36,0	0/1:20,5:22:99:255,0,290	0/1:7,10:17:9.27:92,0,9	0/1:36,1:36:6.94:7,0,31	1/1:27,0:26:12.22:56,12,0	0/1:34,1:34:10.01:10,0,51	0/1:36,2:36:37.21:74,0,37	0/1:21,2:21:18.21:18,0,58	0/1:8,6:12:5.35:5,0,55	0/1:9,1:10:16.03:16,0,243	0/1:10,1:10:50.67:51,0,98	0/1:29,0:29:53.63:54,0,83	1/1:9,28:37:58.86:745,59,0	1/1:36,1:35:11.21:33,11,0	0/1:18,5:18:2.27:2,0,65	0/1:15,7:18:12.57:70,0,13	0/1:21,3:21:7.11:7,0,62	1/1:3,25:23:34.87:641,35,0	0/1:19,1:19:49.36:49,0,65	0/1:2,7:7:19.94:165,0,20
chr10	88626360	.	T	TGTTG	36042.57	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=6.129;DP=588;FS=21.387;HRun=0;HaplotypeScore=247.1739;InbreedingCoeff=0.9380;MQ=72.54;MQ0=0;MQRankSum=-10.140;QD=66.75;ReadPosRankSum=4.083;VQSLOD=3.3341;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:24:69.23:1811,69,0	1/1:3,14:17:48.16:1223,48,0	0/0:27,0:27:81.21:0,81,1573	0/0:21,0:19:51.17:0,51,964	1/1:5,23:29:64.80:1426,65,0	1/1:3,12:15:39.12:999,39,0	1/1:5,14:19:54.18:1380,54,0	1/1:12,19:31:63.16:1662,63,0	1/1:4,17:21:57.20:1580,57,0	1/1:3,16:20:57.19:1590,57,0	1/1:0,24:24:72.25:1860,72,0	1/1:4,22:26:69.24:1862,69,0	1/1:4,20:24:54.19:1559,54,0	1/1:6,16:23:60.20:1550,60,0	1/1:11,36:47:99:3306,123,0	1/1:3,15:18:45.15:1251,45,0	1/1:4,10:14:27.56:733,28,0	1/1:0,5:5:15.05:434,15,0	1/1:6,6:12:24.08:679,24,0	1/1:7,36:43:99:2988,120,0	1/1:0,4:5:12.04:297,12,0	1/1:1,25:26:75.24:1953,75,0	1/1:1,16:17:45.15:1200,45,0	1/1:6,5:11:8.16:143,8,0	1/1:8,19:27:72.16:1733,72,0	1/1:3,15:19:48.16:1386,48,0	1/1:7,9:16:45.14:1110,45,0	1/1:3,4:7:18:329,18,0
chr10	88626367	.	A	AAG	21830.54	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=6.980;DP=636;FS=9.997;HRun=0;HaplotypeScore=291.9948;InbreedingCoeff=0.8913;MQ=72.25;MQ0=0;MQRankSum=-9.287;QD=37.19;ReadPosRankSum=3.132;VQSLOD=3.1430;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,21:26:69.19:1150,69,0	1/1:5,14:19:39.13:679,39,0	0/0:28,0:28:63.05:0,63,788	0/0:21,0:19:42.10:0,42,524	1/1:10,22:32:54.18:849,54,0	1/1:7,12:19:36.10:578,36,0	1/1:3,16:20:48.12:783,48,0	1/1:18,22:40:78.26:1299,78,0	1/1:5,17:22:54.18:930,54,0	1/1:7,14:21:39.13:644,39,0	1/1:7,21:28:60.19:1009,60,0	1/1:6,22:28:63.21:1067,63,0	1/1:6,18:25:51.17:872,51,0	1/1:3,21:24:60.20:969,60,0	1/1:11,39:50:99:1909,114,0	1/1:4,16:20:48.16:835,48,0	1/1:8,7:15:24.08:416,24,0	1/1:2,3:5:9.03:158,9,0	1/1:1,12:13:30.10:525,30,0	1/1:4,40:44:99:2027,120,0	1/1:1,3:4:9.03:157,9,0	1/1:3,22:25:66.21:1125,66,0	1/1:4,16:20:45.13:752,45,0	1/1:4,8:12:17.61:196,18,0	1/1:7,22:29:63.21:1056,63,0	1/1:3,18:21:54.13:912,54,0	1/1:7,14:21:51.16:829,51,0	1/1:1,3:4:6.02:105,6,0
chr10	88626417	.	TA	T	21514.93	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=3.174;DP=663;FS=11.607;HRun=2;HaplotypeScore=222.5199;InbreedingCoeff=0.9221;MQ=74.49;MQ0=0;MQRankSum=-9.017;QD=34.31;ReadPosRankSum=4.708;VQSLOD=1.9305;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:33.06:408,33,0	1/1:1,25:26:69.22:895,69,0	0/0:21,0:21:48.03:0,48,647	0/0:15,0:15:44.99:0,45,517	1/1:0,32:32:90:1100,90,0	1/1:0,23:23:63.20:817,63,0	1/1:1,28:29:75.18:951,75,0	1/1:4,27:31:78.23:986,78,0	1/1:2,21:23:60.08:738,60,0	1/1:0,29:29:78.24:998,78,0	1/1:1,19:20:51.17:661,51,0	1/1:1,34:35:99:1263,99,0	1/1:1,31:32:84.27:1089,84,0	1/1:0,19:19:48.16:622,48,0	1/1:2,46:48:99:1749,135,0	1/1:0,27:27:81.26:1051,81,0	1/1:0,14:14:39.06:485,39,0	1/1:1,6:7:4.82:163,5,0	1/1:0,13:13:39.11:492,39,0	1/1:2,37:39:99:1400,108,0	1/1:0,10:10:27.09:350,27,0	1/1:2,18:20:51.17:661,51,0	1/1:1,23:24:63.20:817,63,0	1/1:0,15:15:32.60:427,33,0	1/1:0,28:28:81.26:1050,81,0	1/1:0,26:26:72.20:905,72,0	1/1:1,33:34:99:1283,99,0	1/1:2,6:8:12.04:156,12,0
chr10	88627024	.	TCACTCA	T	17432.49	PASS	AC=48;AF=0.923;AN=52;BaseQRankSum=10.661;DP=306;FS=18.273;HRun=0;HaplotypeScore=164.2497;InbreedingCoeff=0.7486;MQ=83.04;MQ0=0;MQRankSum=-10.888;QD=68.10;ReadPosRankSum=8.329;VQSLOD=3.5884;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:9.03:230,9,0	1/1:0,5:5:15.05:384,15,0	0/0:22,0:22:66.22:0,66,2298	0/0:28,0:28:78.27:0,78,2452	1/1:0,20:20:51.18:1295,51,0	1/1:0,19:19:54.19:1382,54,0	1/1:0,7:7:21.07:537,21,0	1/1:0,4:4:12.04:307,12,0	1/1:0,11:11:30.10:768,30,0	1/1:0,26:26:66.09:1689,66,0	1/1:0,8:8:18.06:437,18,0	1/1:0,16:16:48.16:1228,48,0	1/1:0,8:8:21.07:538,21,0	1/1:0,11:11:27.09:691,27,0	1/1:0,15:15:45.15:1152,45,0	1/1:0,15:15:39.13:994,39,0	1/1:0,2:2:3.01:77,3,0	./.	1/1:0,5:5:3.01:77,3,0	1/1:0,17:17:45.15:1128,45,0	./.	1/1:0,10:10:27.09:691,27,0	1/1:0,12:12:36.12:921,36,0	1/1:0,3:3:6.02:153,6,0	1/1:0,13:15:45.15:1142,45,0	1/1:0,8:8:21.07:538,21,0	1/1:0,10:10:30.10:768,30,0	1/1:0,4:4:12.04:307,12,0
chr10	88627068	.	C	CCTTTTTTAAAT	36694.66	PASS	AB=0.600;AC=49;AF=0.907;AN=54;BaseQRankSum=6.253;DP=363;FS=1.633;HRun=0;HaplotypeScore=237.6664;InbreedingCoeff=0.6334;MQ=78.88;MQ0=0;MQRankSum=-8.348;QD=110.86;ReadPosRankSum=2.962;VQSLOD=4.5931;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,3:7:6.02:290,6,0	1/1:6,1:7:18.06:777,18,0	0/0:12,0:12:33.11:0,33,937	0/0:20,0:20:44.47:0,44,1282	1/1:9,2:11:30.10:1157,30,0	1/1:12,10:24:51.18:2456,51,0	1/1:10,2:12:36.09:1429,36,0	1/1:13,1:14:27.05:1116,27,0	1/1:7,5:12:27.09:1212,27,0	1/1:8,8:16:42.01:1860,42,0	1/1:4,2:6:15.05:617,15,0	1/1:11,8:20:54.18:2795,54,0	1/1:5,7:12:27.09:1269,27,0	1/1:8,7:15:30.10:1408,30,0	1/1:9,10:19:48.16:2439,48,0	1/1:9,8:17:45.15:2459,45,0	0/1:1,1:3:31.16:168,0,31	1/1:0,1:1:3.01:175,3,0	1/1:13,0:12:21.07:585,21,0	1/1:14,12:26:60.16:2504,60,0	./.	1/1:5,7:12:33.11:1776,33,0	1/1:7,8:15:43.39:1928,43,0	1/1:0,2:2:3.01:174,3,0	1/1:11,12:23:66.23:3319,66,0	1/1:12,5:17:39.13:1663,39,0	1/1:7,11:18:36.12:2002,36,0	1/1:5,3:8:21.07:1119,21,0
chr10	88627109	.	CT	C	7493.27	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=7.922;DP=289;FS=6.832;HRun=2;HaplotypeScore=174.4736;InbreedingCoeff=0.7349;MQ=92.53;MQ0=0;MQRankSum=-9.629;QD=29.74;ReadPosRankSum=5.867;VQSLOD=3.9495;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:6:12.04:155,12,0	1/1:0,8:8:21.07:272,21,0	0/0:15,0:15:45.13:0,45,630	0/0:22,0:22:65.21:0,65,892	1/1:0,11:11:24.08:311,24,0	1/1:0,16:16:30.10:385,30,0	1/1:0,8:8:24.08:311,24,0	1/1:0,15:15:39.13:506,39,0	1/1:0,7:7:15.05:194,15,0	1/1:1,10:11:30.10:383,30,0	1/1:0,7:7:9.03:116,9,0	1/1:1,8:9:24.08:311,24,0	1/1:0,11:11:27.02:328,27,0	1/1:1,10:11:24.01:290,24,0	1/1:0,10:10:24.08:311,24,0	1/1:1,8:9:24.08:311,24,0	1/1:1,5:6:9.03:116,9,0	1/1:0,1:1:3.01:39,3,0	1/1:0,8:8:21.03:242,21,0	1/1:1,20:21:57.19:738,57,0	1/1:0,3:3:3.01:39,3,0	1/1:0,13:13:30.10:388,30,0	1/1:0,10:10:24.08:310,24,0	1/1:2,3:5:6.02:78,6,0	1/1:0,16:16:48.16:621,48,0	1/1:1,8:9:18.06:233,18,0	1/1:1,14:14:21.07:272,21,0	1/1:0,6:6:18.06:233,18,0
chr10	88627147	.	GCTTGTATTTTCTGTGACTGT	G	17955.58	PASS	AC=48;AF=0.923;AN=52;BaseQRankSum=6.334;DP=207;FS=5.082;HRun=0;HaplotypeScore=184.8233;InbreedingCoeff=0.5026;MQ=98.67;MQ0=0;MQRankSum=-8.445;QD=105.00;ReadPosRankSum=7.672;VQSLOD=3.9469;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:2,2:4:6.02:343,6,0	1/1:3,6:9:18.06:1030,18,0	0/0:17,0:17:49.41:0,49,2687	0/0:15,0:15:42.12:0,42,1995	1/1:2,11:13:27.09:1541,27,0	1/1:4,3:7:9.03:515,9,0	1/1:2,3:5:9.03:515,9,0	1/1:5,1:6:3.01:172,3,0	1/1:2,1:3:3.01:172,3,0	1/1:3,8:11:24.08:1373,24,0	1/1:0,9:9:24.08:1373,24,0	1/1:2,2:4:6.02:343,6,0	1/1:0,3:3:9.03:515,9,0	1/1:3,2:5:6.02:343,6,0	1/1:4,1:5:3.01:172,3,0	1/1:1,2:3:6.02:343,6,0	1/1:3,3:6:9.03:515,9,0	./.	./.	1/1:6,13:19:39.13:2231,39,0	1/1:1,4:5:12.04:625,12,0	1/1:1,7:8:18.06:1030,18,0	1/1:4,9:13:18.06:1030,18,0	1/1:0,3:3:9.03:515,9,0	1/1:2,10:12:30.10:1716,30,0	1/1:5,1:6:3.01:172,3,0	1/1:2,3:4:6.02:343,6,0	1/1:1,6:7:18.06:1030,18,0
chr10	88627345	.	A	ATGTGCGCG	3462.55	PASS	AB=0.923;AC=13;AF=0.250;AN=52;BaseQRankSum=0.196;DP=329;FS=5.130;HRun=0;HaplotypeScore=196.7925;InbreedingCoeff=-0.2825;MQ=31.84;MQ0=23;MQRankSum=-2.466;QD=20.01;ReadPosRankSum=4.375;VQSLOD=2.8332;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:5,0:1:3:0,3,25	0/0:4,0:1:3.01:0,3,46	0/0:14,0:13:3.01:0,3,90	0/0:10,0:10:0.34:0,0,28	0/0:19,3:21:6.36:0,6,49	0/1:10,12:20:99:1613,0,193	1/1:11,2:13:9.03:260,9,0	0/1:10,0:8:99:157,0,120	0/0:3,0:3:2.97:0,3,66	0/1:21,0:20:56.46:56,0,159	0/1:14,0:12:64.17:64,0,284	0/1:13,0:13:33.80:34,0,35	0/0:15,0:14:10.57:0,11,101	0/1:10,0:11:89.84:90,0,97	0/1:11,0:11:72.93:73,0,116	0/0:3,0:2:6.02:0,6,75	0/1:9,5:14:31.23:571,0,31	0/0:17,0:16:5.87:0,6,93	0/0:15,0:13:3.48:0,3,90	0/0:10,0:10:8.77:0,9,178	0/0:9,0:8:3.01:0,3,75	0/0:9,1:8:0:0,0,1	0/1:14,2:17:26.36:26,0,126	0/1:12,0:11:99:217,0,296	0/0:8,0:6:18:0,18,267	0/1:15,0:12:99:302,0,279
chr10	88627351	.	A	AT	36.72	PASS	AB=0.950;AC=6;AF=0.250;AN=24;BaseQRankSum=0.095;DP=109;FS=38.729;HRun=0;HaplotypeScore=31.5369;InbreedingCoeff=-0.1690;MQ=34.90;MQ0=20;MQRankSum=-3.020;QD=0.87;ReadPosRankSum=0.627;VQSLOD=0.4736;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:0.89:2,1,0	./.	./.	./.	./.	./.	./.	0/1:15,0:12:11.79:88,0,12	0/0:5,0:5:2.98:0,3,22	0/0:4,0:2:0.34:0,0,10	0/0:1,0:1:3.01:0,3,36	./.	./.	./.	./.	0/0:3,0:3:2.50:0,2,9	./.	./.	0/1:6,0:6:6.12:6,0,21	0/0:2,2:3:2.68:0,3,11	./.	0/0:5,0:5:8.30:0,8,53	./.	./.	0/1:6,2:8:13.92:14,0,14	0/0:5,0:4:8.89:0,9,78	./.	0/1:9,0:6:11.07:11,0,30
chr10	88627399	.	AC	A	1306.56	PASS	AB=0.917;AC=27;AF=0.794;AN=34;BaseQRankSum=8.046;DP=283;FS=0.790;HRun=2;HaplotypeScore=111.6360;InbreedingCoeff=0.4765;MQ=44.75;MQ0=6;MQRankSum=-5.118;QD=8.77;ReadPosRankSum=2.487;VQSLOD=1.3655;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:39,0:29:87.19:0,87,1193	0/0:25,0:23:57.18:0,57,805	1/1:10,0:10:3:27,3,0	1/1:16,1:17:5.94:42,6,0	0/1:6,3:8:0.15:0,0,0	1/1:9,0:9:24.08:308,24,0	./.	1/1:4,0:4:3.82:108,4,0	./.	1/1:17,0:16:3.01:35,3,0	1/1:14,0:14:3.01:39,3,0	1/1:16,0:16:2.94:18,3,0	./.	1/1:10,0:10:6.02:71,6,0	./.	1/1:2,0:2:5.95:56,6,0	1/1:7,0:5:15.05:194,15,0	./.	0/1:11,0:11:0.01:0,0,0	./.	./.	0/1:8,0:8:0:0,0,0	./.	1/1:12,1:13:39.13:500,39,0	./.	1/1:2,0:2:2.94:18,3,0
chr10	88627400	.	CCAT	C	1507.53	PASS	AB=0.593;AC=30;AF=0.833;AN=36;BaseQRankSum=8.121;DP=293;FS=2.734;HRun=0;HaplotypeScore=117.5284;InbreedingCoeff=0.4795;MQ=44.72;MQ0=5;MQRankSum=-5.430;QD=8.97;ReadPosRankSum=2.322;VQSLOD=2.9787;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:0,13:14:0:0,0,0	./.	0/0:40,0:30:90.20:0,90,1853	0/0:26,0:24:49.21:0,49,1331	1/1:0,10:10:3.01:44,3,0	1/1:1,16:17:6.02:78,6,0	1/1:3,5:8:1.82:5,2,0	1/1:0,8:8:24.08:312,24,0	./.	1/1:0,3:4:11.40:128,11,0	./.	1/1:0,16:16:3.01:53,3,0	1/1:0,14:14:3.01:38,3,0	1/1:1,15:16:5.50:46,6,0	./.	1/1:0,10:10:6.02:89,6,0	./.	1/1:0,2:2:6.02:92,6,0	1/1:7,5:10:15.05:196,15,0	./.	1/1:0,9:11:3.19:19,3,0	./.	./.	0/1:0,4:8:0:0,0,0	./.	1/1:3,12:15:39.11:485,39,0	./.	1/1:0,2:2:3.01:36,3,0
chr10	88627403	.	TACACACAC	T	153.57	PASS	AB=0.957;AC=19;AF=0.528;AN=36;BaseQRankSum=2.856;DP=308;FS=0.000;HRun=0;HaplotypeScore=140.5146;InbreedingCoeff=0.2987;MQ=47.62;MQ0=5;MQRankSum=-2.246;QD=1.04;ReadPosRankSum=-2.509;VQSLOD=2.1781;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:0:0,0,0	./.	0/0:43,0:33:64.32:0,64,2419	0/0:26,0:24:66.23:0,66,2418	1/1:10,0:10:2.96:19,3,0	1/1:18,0:18:5.69:29,6,0	0/0:9,0:8:2.99:0,3,24	0/0:10,0:10:2.93:0,3,11	./.	1/1:4,0:4:1.23:6,1,0	./.	1/1:16,0:16:2.68:11,3,0	0/1:15,0:15:0.30:3,0,0	0/1:16,0:16:1.26:6,0,1	./.	0/1:11,0:11:2.21:15,0,2	./.	0/0:3,0:3:4.68:0,5,58	1/1:7,5:10:4.59:94,5,0	./.	1/1:11,0:11:1.61:5,2,0	./.	./.	0/0:8,0:8:0.47:0,0,1	./.	0/1:13,5:18:62.64:66,0,63	./.	1/1:3,0:3:2.34:10,2,0
chr10	88627408	.	A	ATG	2645.99	PASS	AB=0.661;AC=32;AF=0.842;AN=38;BaseQRankSum=8.559;DP=381;FS=4.472;HRun=0;HaplotypeScore=160.8343;InbreedingCoeff=0.3103;MQ=49.78;MQ0=4;MQRankSum=-6.030;QD=11.02;ReadPosRankSum=1.776;VQSLOD=3.0695;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,13:22:3.48:38,3,0	./.	0/0:40,0:30:79.26:0,79,1210	0/0:25,0:24:66.23:0,66,1065	1/1:1,10:11:3.01:43,3,0	1/1:1,17:18:6.02:97,6,0	0/1:8,5:12:25.02:54,0,25	1/1:9,10:19:54.18:802,54,0	1/1:8,6:14:3.01:42,3,0	1/1:5,3:8:21.07:311,21,0	./.	1/1:5,16:21:6.02:73,6,0	1/1:4,15:19:12.02:138,12,0	1/1:2,14:17:6.01:81,6,0	./.	1/1:2,11:13:6.02:73,6,0	./.	0/1:1,2:3:16.83:87,0,17	1/1:7,5:10:15.05:220,15,0	./.	1/1:10,9:19:2.52:34,3,0	./.	./.	./.	./.	1/1:6,12:18:11.73:460,12,0	1/1:5,3:8:6.02:80,6,0	1/1:2,3:5:9.03:138,9,0
chr10	88627647	.	AC	A	28774.65	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=6.499;DP=798;FS=2.446;HRun=1;HaplotypeScore=135.9442;InbreedingCoeff=0.9988;MQ=82.53;MQ0=0;MQRankSum=-12.147;QD=38.73;ReadPosRankSum=6.751;VQSLOD=4.0072;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,50:50:99:1927,141,0	1/1:0,14:14:33.11:461,33,0	0/0:30,0:30:84.26:0,84,1259	0/0:25,0:25:73.76:0,74,1090	1/1:0,31:31:87.22:1191,87,0	1/1:0,31:31:87.25:1194,87,0	1/1:0,17:17:51.17:713,51,0	1/1:0,29:29:87.26:1179,87,0	1/1:0,28:28:84.28:1174,84,0	1/1:0,26:26:75.24:1032,75,0	1/1:0,25:25:69.14:920,69,0	1/1:0,40:40:99:1614,117,0	1/1:0,35:35:99:1384,99,0	1/1:0,31:31:81.23:1111,81,0	1/1:0,27:27:75.21:1027,75,0	1/1:0,32:32:87.25:1195,87,0	1/1:0,33:33:87.29:1216,87,0	1/1:0,10:10:24.08:335,24,0	1/1:0,25:25:75.22:1027,75,0	1/1:0,25:25:75.21:1026,75,0	1/1:0,34:34:93.31:1300,93,0	1/1:0,24:24:69.19:942,69,0	1/1:0,36:36:99:1361,99,0	1/1:0,24:24:66.22:923,66,0	1/1:0,29:29:81.27:1132,81,0	1/1:0,28:28:81.25:1113,81,0	1/1:0,32:32:87.29:1216,87,0	1/1:0,27:27:78.22:1063,78,0
chr10	88628428	.	AG	A	16084.90	PASS	AB=0.968;AC=43;AF=0.768;AN=56;BaseQRankSum=-14.553;DP=607;FS=1.997;HRun=1;HaplotypeScore=77.1325;InbreedingCoeff=0.4954;MQ=78.49;MQ0=1;MQRankSum=-3.709;QD=31.05;ReadPosRankSum=1.176;VQSLOD=4.6348;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:24.08:331,24,0	1/1:2,10:12:28.94:435,29,0	0/0:18,0:19:49.50:0,49,592	0/0:15,0:14:32.24:0,32,463	0/0:32,1:33:8.24:0,8,180	0/1:20,1:21:70.34:70,0,70	0/1:14,1:15:12.82:13,0,54	1/1:1,39:40:99:1323,108,0	1/1:5,13:18:45.29:628,45,0	1/1:0,35:35:99:1424,105,0	1/1:0,18:18:51.13:685,51,0	0/1:16,0:16:11.95:12,0,72	1/1:0,19:19:51.17:708,51,0	0/1:17,1:18:43.93:82,0,44	1/1:0,25:26:72.21:979,72,0	1/1:2,20:22:57.36:850,57,0	1/1:0,24:24:66.22:914,66,0	0/1:13,0:13:38.47:38,0,48	1/1:1,30:31:90.19:1116,90,0	1/1:0,32:32:90.18:1179,90,0	1/1:0,12:13:30.07:396,30,0	0/0:22,0:22:23.61:0,24,127	1/1:1,27:28:66.22:916,66,0	1/1:0,15:15:36.07:475,36,0	1/1:6,14:20:54.15:691,54,0	1/1:0,23:23:66.18:867,66,0	1/1:0,30:30:84.25:1165,84,0	1/1:0,20:20:57.19:789,57,0
chr10	88630629	.	TCTGGCAGCAGCAAGG	T	924.59	PASS	AB=0.998;AC=24;AF=0.444;AN=54;BaseQRankSum=-8.777;DP=770;FS=1.677;HRun=0;HaplotypeScore=168.0234;InbreedingCoeff=-0.3462;MQ=37.32;MQ0=184;MQRankSum=-8.975;QD=1.55;ReadPosRankSum=-7.696;VQSLOD=0.6566;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:15:50.75:51,0,403	0/1:15,0:8:8.93:9,0,153	0/0:4,0:4:6.18:0,6,43	0/0:3,0:3:6.45:0,6,48	0/0:23,0:13:1.28:0,1,1	0/1:26,1:8:25.85:26,0,161	0/1:63,0:22:99:158,0,269	1/1:39,0:6:5.93:40,6,0	0/1:25,0:13:12.94:13,0,397	0/1:46,0:19:99:158,0,386	1/1:8,5:9:0.47:2,0,0	0/1:36,0:18:61.96:62,0,457	0/1:28,0:10:70.66:71,0,356	0/1:50,0:27:99:110,0,720	0/1:21,0:10:37.82:38,0,315	0/1:19,0:12:18.86:19,0,228	0/1:27,0:21:82.15:82,0,487	0/0:21,0:11:12.04:0,12,236	0/0:35,0:5:3.01:0,3,81	1/1:19,2:7:2.94:18,3,0	0/0:63,0:31:29.29:0,29,630	./.	1/1:23,1:12:2.90:31,3,0	0/1:52,0:41:77.49:77,0,1367	0/1:24,0:12:0.90:1,0,232	0/1:23,0:7:81.66:82,0,167	0/0:5,0:2:0.47:0,0,1	0/1:12,0:11:20.83:21,0,405
chr10	88633424	.	AC	A	5020.34	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.869;DP=608;FS=5.562;HRun=3;HaplotypeScore=60.8272;InbreedingCoeff=0.9956;MQ=79.60;MQ0=0;MQRankSum=-2.651;QD=33.03;ReadPosRankSum=2.516;VQSLOD=5.3565;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:42.10:0,42,581	0/0:5,0:5:15.05:0,15,215	0/0:19,0:19:18.28:0,18,601	0/0:20,0:20:57.13:0,57,753	1/1:1,33:34:93.29:1152,93,0	1/1:0,30:30:84.26:1041,84,0	1/1:1,13:14:36.11:446,36,0	0/0:39,0:38:99:0,117,1650	0/0:17,0:17:51.17:0,51,734	0/0:21,0:21:60.20:0,60,864	0/0:28,0:28:84.28:0,84,1206	1/1:0,21:21:57.18:707,57,0	0/0:14,0:14:39.13:0,39,562	1/1:2,25:27:60.19:744,60,0	0/0:29,0:29:87.29:0,87,1250	0/0:26,0:26:72.24:0,72,1021	0/0:16,0:16:48.16:0,48,689	1/1:1,10:11:30.09:372,30,0	0/0:18,0:17:48.14:0,48,658	0/0:30,0:30:90.29:0,90,1277	0/0:16,0:16:45.15:0,45,643	1/1:0,15:15:45.14:558,45,0	0/0:25,0:25:75.25:0,75,1078	0/0:15,0:15:42.14:0,42,602	0/0:26,0:25:75.24:0,75,1062	0/0:31,0:31:93.31:0,93,1339	0/0:31,0:31:87.29:0,87,1253	0/0:16,0:16:48.13:0,48,654
chr10	88634387	.	CTGT	C	760.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.114;DP=600;FS=4.917;HRun=0;HaplotypeScore=86.1128;InbreedingCoeff=0.9941;MQ=67.83;MQ0=0;MQRankSum=-1.315;QD=31.70;ReadPosRankSum=2.467;VQSLOD=3.4767;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.29:0,84,1830	0/0:11,0:11:24.04:0,24,439	0/0:21,0:20:48.09:0,48,874	0/0:25,0:23:47.99:0,48,912	0/0:20,0:20:60.21:0,60,1308	0/0:14,0:14:39.13:0,39,850	0/0:14,0:14:39.13:0,39,852	0/0:32,0:32:93.31:0,93,1991	0/0:24,0:24:69.24:0,69,1481	0/0:18,0:18:51.17:0,51,1081	0/0:19,0:19:45.15:0,45,984	0/0:22,0:22:60.18:0,60,1208	0/0:32,0:32:87.28:0,87,1842	0/0:24,0:24:69.24:0,69,1500	0/0:26,0:26:72.19:0,72,1473	0/0:34,0:34:93.32:0,93,2017	0/0:21,0:21:54.16:0,54,1129	0/0:10,0:10:27.05:0,27,525	0/0:28,0:28:69.20:0,69,1307	0/0:31,0:31:84.29:0,84,1811	0/0:12,0:12:30.10:0,30,648	0/0:14,0:14:36.12:0,36,787	0/0:20,0:20:57.18:0,57,1206	0/0:17,0:17:45.15:0,45,976	1/1:5,19:24:54.18:856,54,0	0/0:27,0:27:81.26:0,81,1731	0/0:18,0:18:48.16:0,48,1041	0/0:11,0:11:24.07:0,24,482
chr10	88636949	.	G	GA	1099.12	PASS	AB=0.799;AC=10;AF=0.179;AN=56;BaseQRankSum=11.340;DP=1329;FS=42.908;HRun=0;HaplotypeScore=226.8862;InbreedingCoeff=-0.2205;MQ=51.51;MQ0=27;MQRankSum=-11.026;QD=2.01;ReadPosRankSum=-1.403;VQSLOD=1.4815;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,7:44:83.69:0,84,1331	0/1:15,17:25:99:108,0,477	0/0:24,0:13:39.12:0,39,513	0/0:33,0:21:58.65:0,59,748	0/0:43,6:39:31.85:0,32,1002	0/1:36,6:37:5.35:5,0,1020	0/0:39,8:41:99:0,105,1420	0/1:61,10:62:24.08:24,0,1916	0/0:52,3:52:99:0,150,2007	0/1:40,8:41:99:170,0,1114	0/1:34,14:35:97.26:97,0,822	0/0:34,0:34:72.24:0,72,1001	0/0:56,0:54:99:0,156,2132	0/0:46,5:48:78.47:0,78,1598	0/0:51,5:52:97.75:0,98,1903	0/0:40,5:42:37.14:0,37,1455	0/1:40,8:46:9.69:10,0,1411	0/0:36,6:38:0.77:0,1,1101	0/0:37,3:36:8.69:0,9,1128	0/1:47,19:51:99:249,0,1195	0/0:50,1:50:99:0,141,1928	0/1:37,7:32:8.20:8,0,1038	0/1:41,11:45:99:180,0,1103	0/0:33,5:34:48.93:0,49,1115	0/1:50,33:60:99:387,0,1236	0/0:33,5:37:93.31:0,93,1299	0/0:45,4:48:81.55:0,82,1678	0/0:21,0:19:54.15:0,54,715
chr10	88637588	.	T	TC	7998.64	PASS	AB=0.709;AC=24;AF=0.444;AN=54;BaseQRankSum=23.379;DP=1402;FS=85.438;HRun=0;HaplotypeScore=239.8669;InbreedingCoeff=-0.7966;MQ=44.33;MQ0=69;MQRankSum=-23.008;QD=6.21;ReadPosRankSum=2.365;VQSLOD=1.4985;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:32,14:41:73.41:73,0,1171	0/1:10,11:18:99:178,0,374	0/0:21,0:1:3.01:0,3,33	./.	0/1:33,27:47:99:233,0,1127	0/1:25,32:44:99:407,0,629	0/1:27,10:33:28.77:29,0,848	0/1:29,12:33:1.97:2,0,1030	0/1:31,14:41:99:163,0,1111	0/1:44,57:74:99:867,0,1470	0/1:32,23:46:99:456,0,1034	0/1:32,33:59:99:616,0,1139	0/1:35,34:59:99:642,0,1216	0/1:22,33:42:99:228,0,780	0/1:35,36:55:99:353,0,1282	0/1:27,29:45:99:175,0,911	0/1:40,16:50:99:272,0,1222	0/1:22,8:28:99:151,0,725	0/1:26,10:26:61.92:62,0,809	0/1:23,21:38:99:346,0,866	0/0:33,7:37:54.40:0,54,1281	0/1:37,32:59:99:648,0,1264	0/1:30,24:46:99:317,0,917	0/0:30,5:32:39.49:0,39,1042	0/1:33,15:41:99:136,0,1228	0/1:30,21:46:99:430,0,1085	0/1:31,57:73:99:1153,0,971	0/1:24,4:28:61.43:61,0,769
chr10	88638138	.	C	CAGAT	17249.32	PASS	AB=0.782;AC=28;AF=0.500;AN=56;BaseQRankSum=13.789;DP=1226;FS=8.067;HRun=0;HaplotypeScore=445.8290;InbreedingCoeff=-0.7451;MQ=44.43;MQ0=5;MQRankSum=-18.930;QD=14.74;ReadPosRankSum=8.339;VQSLOD=2.8324;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:94.24:94,0,111	0/1:20,0:19:99:101,0,180	0/0:31,0:14:38.76:0,39,597	0/0:25,0:19:26.83:0,27,905	0/1:29,16:50:99:398,0,412	0/1:34,31:71:99:1204,0,278	0/1:24,19:47:99:745,0,398	0/1:39,0:36:99:112,0,620	0/1:36,0:36:39.33:282,0,39	0/1:30,20:51:99:1239,0,329	0/1:26,17:43:99:439,0,333	0/1:29,21:49:99:572,0,508	0/1:42,31:78:99:1585,0,271	0/1:30,27:58:99:867,0,321	0/1:37,22:64:99:1274,0,252	0/1:43,32:82:99:1781,0,217	0/1:15,4:18:98:194,0,98	0/1:11,2:14:99:102,0,137	0/1:22,11:33:99:622,0,308	0/1:30,18:45:99:582,0,389	0/1:15,0:15:20.76:21,0,217	0/1:31,22:58:99:1316,0,325	0/1:36,17:54:99:817,0,324	0/1:27,8:37:15.06:307,0,15	0/1:25,16:44:99:1040,0,134	0/1:38,0:37:99:361,0,404	1/1:31,31:64:1.94:1141,2,0	1/1:6,0:6:11.13:53,11,0
chr10	88638147	.	A	AGACT	32045.34	PASS	AB=0.997;AC=46;AF=0.821;AN=56;BaseQRankSum=9.354;DP=1161;FS=0.834;HRun=0;HaplotypeScore=398.4953;InbreedingCoeff=0.2313;MQ=43.29;MQ0=3;MQRankSum=-13.784;QD=28.77;ReadPosRankSum=10.374;VQSLOD=3.4388;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:10.86:393,0,11	1/1:10,11:20:8.71:335,9,0	0/0:25,0:19:53.75:0,54,930	0/0:22,0:20:59.96:0,60,1001	0/1:46,0:46:12.38:769,0,12	1/1:69,0:68:50.09:2133,50,0	0/1:50,0:46:44.77:1162,0,45	1/1:36,0:33:8.51:660,9,0	1/1:39,0:39:79.32:1232,79,0	1/1:52,0:50:25.20:1760,25,0	0/1:40,0:39:49.71:959,0,50	0/1:48,0:45:44.44:1121,0,44	1/1:77,0:77:75.33:2676,75,0	1/1:52,0:51:34.59:1406,35,0	1/1:53,0:53:96.55:2240,97,0	1/1:82,0:82:99:2919,153,0	1/1:21,0:20:25.81:448,26,0	1/1:13,1:13:2.54:299,3,0	1/1:32,0:28:20.31:823,20,0	1/1:50,0:45:27.29:1181,27,0	0/1:14,0:14:17.20:324,0,17	1/1:58,0:57:16.28:2029,16,0	1/1:55,0:53:11.76:1657,12,0	1/1:34,0:34:37.88:621,38,0	1/1:40,0:40:60.35:1610,60,0	1/1:38,0:37:50.55:1031,51,0	1/1:59,0:59:99:2058,114,0	1/1:7,0:7:12.04:200,12,0
chr10	88638154	.	C	CTGACAG	33224.61	PASS	AB=0.749;AC=35;AF=0.625;AN=56;BaseQRankSum=10.062;DP=1130;FS=11.214;HRun=0;HaplotypeScore=411.3732;InbreedingCoeff=-0.3004;MQ=44.45;MQ0=2;MQRankSum=-16.258;QD=30.74;ReadPosRankSum=16.056;VQSLOD=2.3303;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:3,9:20:27.09:802,27,0	0/1:11,0:18:4.76:697,0,5	0/0:24,0:23:65.68:0,66,1449	0/0:25,0:25:66.17:0,66,1355	0/1:25,11:39:46.39:1052,0,46	0/1:51,21:72:63.98:2121,0,64	0/1:34,8:41:83.93:761,0,84	1/1:15,10:31:12.66:1354,13,0	1/1:10,24:37:13.21:1931,13,0	0/1:33,0:49:87.12:1735,0,87	1/1:26,0:39:5.87:1237,6,0	0/1:33,11:42:99:1146,0,116	1/1:49,26:77:24.60:2395,25,0	0/1:34,11:48:99:1184,0,138	0/1:33,21:55:99:1910,0,170	1/1:50,26:81:10.11:2501,10,0	0/1:20,0:21:60:165,0,60	0/1:9,4:14:16.08:421,0,16	0/1:26,2:29:99:696,0,201	0/1:29,14:42:99:1360,0,162	1/1:8,4:13:22.61:513,23,0	1/1:33,17:53:36.22:1663,36,0	0/1:31,19:50:17.77:1903,0,18	0/1:22,7:32:17.22:435,0,17	0/1:25,14:40:13.07:1159,0,13	0/1:11,17:35:22.37:1984,0,22	0/1:40,16:62:99:1733,0,124	1/1:3,4:8:12.04:367,12,0
chr10	88638159	.	A	ACT	11801.06	PASS	AB=0.787;AC=30;AF=0.536;AN=56;BaseQRankSum=4.699;DP=1145;FS=15.389;HRun=0;HaplotypeScore=456.0418;InbreedingCoeff=-0.6067;MQ=45.05;MQ0=2;MQRankSum=-9.175;QD=10.72;ReadPosRankSum=2.235;VQSLOD=4.0891;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,9:21:29.83:332,30,0	0/1:11,0:16:14.45:185,0,14	0/0:23,0:23:65.69:0,66,915	0/0:21,0:21:54.16:0,54,755	0/1:27,11:38:99:353,0,150	0/1:49,21:69:99:679,0,317	0/1:40,8:45:99:291,0,379	0/1:26,10:33:46.04:559,0,46	1/1:15,24:39:44.69:840,45,0	0/1:32,0:46:99:522,0,322	0/1:26,0:37:99:427,0,150	0/1:36,11:43:99:401,0,307	0/1:55,26:80:99:974,0,200	0/1:38,12:49:99:381,0,345	0/1:37,20:58:99:633,0,405	0/1:50,26:76:99:822,0,288	0/1:23,0:23:58.32:58,0,108	0/1:13,4:16:22.51:162,0,23	0/1:31,2:30:99:207,0,494	0/1:39,12:45:99:449,0,321	1/1:9,4:13:0.75:130,1,0	0/1:38,17:54:99:549,0,313	0/1:33,19:50:99:567,0,207	0/1:25,8:33:94.02:192,0,94	0/1:29,14:42:99:464,0,202	0/1:19,17:35:37.98:727,0,38	0/1:48,17:64:99:658,0,437	1/1:7,4:11:23.99:240,24,0
chr10	88638511	.	AG	A	9013.20	PASS	AB=0.712;AC=21;AF=0.375;AN=56;BaseQRankSum=20.957;DP=899;FS=11.315;HRun=1;HaplotypeScore=211.0695;InbreedingCoeff=-0.6000;MQ=53.16;MQ0=3;MQRankSum=-14.353;QD=11.75;ReadPosRankSum=-0.931;VQSLOD=1.8312;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.13:0,45,679	0/1:6,5:11:99:176,0,248	0/0:22,0:19:54.16:0,54,801	0/0:11,0:11:30.10:0,30,455	0/1:36,28:63:99:695,0,1367	0/1:25,24:46:99:507,0,1051	0/1:16,19:34:99:496,0,636	0/0:41,0:39:99:0,105,1554	0/0:18,0:18:54.18:0,54,843	0/1:28,18:45:99:505,0,1034	0/1:16,22:38:99:739,0,504	0/1:23,18:41:99:630,0,885	0/1:15,16:30:99:439,0,572	0/1:9,12:21:99:416,0,359	0/1:24,21:43:99:548,0,984	0/1:16,19:34:99:573,0,632	0/1:23,10:33:99:284,0,932	0/1:17,8:23:99:215,0,505	0/1:17,8:24:99:256,0,482	0/1:33,25:56:99:658,0,979	0/0:11,0:11:33.11:0,33,516	0/1:25,12:37:99:291,0,1038	0/1:26,20:46:99:460,0,916	0/1:10,7:17:99:142,0,424	0/1:22,3:24:95.45:95,0,835	0/1:30,3:33:26.22:26,0,1259	0/1:22,30:51:99:862,0,888	0/0:13,0:13:39.06:0,39,581
chr10	88638695	.	CA	C	7667.41	PASS	AB=0.747;AC=21;AF=0.375;AN=56;BaseQRankSum=15.616;DP=1137;FS=1.069;HRun=7;HaplotypeScore=192.4764;InbreedingCoeff=-0.5872;MQ=64.80;MQ0=2;MQRankSum=-1.410;QD=7.83;ReadPosRankSum=1.162;VQSLOD=1.2648;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:42.13:0,42,528	0/1:13,3:16:89.25:89,0,214	0/0:24,1:24:57.56:0,58,655	0/1:14,2:15:4.02:4,0,219	0/1:50,19:66:99:306,0,1186	0/1:27,30:56:99:599,0,657	0/1:21,26:47:99:616,0,379	0/0:35,0:35:91.21:0,91,1151	0/0:11,0:11:30.10:0,30,377	0/1:50,13:60:99:295,0,1125	0/1:30,18:46:99:491,0,617	0/1:27,19:45:99:400,0,735	0/1:43,16:55:99:266,0,1021	0/1:23,22:45:99:470,0,568	0/1:40,19:59:99:361,0,1199	0/1:23,20:43:99:461,0,672	0/1:33,10:40:99:280,0,674	0/1:15,9:24:99:182,0,427	0/1:29,14:43:99:378,0,681	0/1:35,31:64:99:683,0,922	0/0:13,0:12:33.11:0,33,415	0/1:25,21:43:99:556,0,351	0/1:41,11:47:99:244,0,958	0/1:16,5:21:95.90:96,0,458	0/1:25,21:45:99:470,0,568	0/0:45,0:45:99:0,108,1337	0/1:42,27:65:99:422,0,1109	0/0:12,0:12:36.12:0,36,453
chr10	88639015	.	ATG	A	16719.19	PASS	AB=0.738;AC=26;AF=0.481;AN=54;BaseQRankSum=7.061;DP=1598;FS=105.841;HRun=0;HaplotypeScore=203.5026;InbreedingCoeff=-0.8280;MQ=32.65;MQ0=276;MQRankSum=-1.587;QD=10.87;ReadPosRankSum=4.302;VQSLOD=1.4993;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,10:15:30.59:340,0,31	0/1:9,11:14:99:376,0,101	0/0:31,0:1:3.01:0,3,44	0/0:23,0:1:2.98:0,3,21	0/1:41,27:56:99:899,0,535	0/1:68,38:77:99:1182,0,920	0/1:45,19:48:99:323,0,1089	0/1:48,25:58:99:715,0,1693	0/1:29,22:31:99:673,0,171	0/1:67,29:64:99:1098,0,1359	0/1:37,12:32:99:300,0,697	0/1:34,19:35:99:533,0,393	0/1:53,34:65:99:967,0,1020	0/1:37,24:46:99:911,0,481	0/1:59,32:62:99:1016,0,911	0/1:44,28:53:99:988,0,635	0/1:34,16:34:99:389,0,682	0/1:16,10:18:99:239,0,310	0/1:48,12:28:99:269,0,888	0/1:34,26:46:99:845,0,915	1/1:3,13:8:21.07:320,21,0	0/1:47,32:59:99:802,0,922	0/1:36,27:44:99:820,0,424	0/1:21,8:23:99:161,0,259	0/1:37,23:40:99:616,0,1047	0/1:47,24:40:99:1020,0,331	0/1:75,29:74:99:916,0,1188	./.
chr10	88639954	.	ATC	A	222.59	PASS	AC=8;AF=0.250;AN=32;BaseQRankSum=0.812;DP=256;FS=0.000;HRun=0;HaplotypeScore=43.7150;InbreedingCoeff=0.4925;MQ=42.51;MQ0=109;MQRankSum=-1.176;QD=3.42;ReadPosRankSum=2.292;VQSLOD=1.1565;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:23,0:14:36.10:0,36,504	0/0:18,0:13:0.10:0,0,270	./.	0/0:6,0:2:0:0,0,0	0/0:4,0:3:8.94:0,9,77	./.	./.	1/1:23,8:9:8.50:144,8,0	1/1:11,7:7:2.90:38,3,0	0/0:16,0:9:6.56:0,7,21	0/0:5,2:4:6.02:0,6,67	./.	0/0:9,0:5:5.95:0,6,51	1/1:8,0:2:3.01:38,3,0	1/1:6,2:5:9.03:112,9,0	./.	./.	0/0:13,0:8:2.97:0,3,20	0/0:4,0:3:5.82:0,6,57	0/0:8,0:4:1.82:0,2,5	./.	./.	0/0:18,1:7:8.46:0,8,60	0/0:8,0:2:5.97:0,6,57	./.	./.
chr10	88639956	.	C	CTA	285.37	PASS	AB=0.852;AC=10;AF=0.263;AN=38;BaseQRankSum=2.845;DP=227;FS=13.681;HRun=0;HaplotypeScore=43.5366;InbreedingCoeff=0.2381;MQ=45.22;MQ0=78;MQRankSum=-2.446;QD=3.36;ReadPosRankSum=3.824;VQSLOD=0.0180;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:24,0:15:36.09:0,36,504	0/0:18,0:13:2.70:0,3,273	0/1:5,0:4:0:0,0,0	0/0:4,2:2:0:0,0,0	0/0:4,0:3:8.94:0,9,77	./.	0/0:3,0:1:2.96:0,3,19	0/1:27,0:9:31.68:32,0,47	0/0:15,0:7:2.22:0,2,7	1/1:5,10:9:9.03:163,9,0	0/0:7,0:4:6.02:0,6,77	./.	0/0:7,1:5:5.91:0,6,60	1/1:4,3:2:3.01:38,3,0	1/1:8,0:5:4.06:53,4,0	./.	./.	0/0:8,4:8:5.84:0,6,39	0/0:3,0:3:5.99:0,6,67	0/1:2,3:4:10.96:48,0,11	./.	./.	0/1:13,5:7:5.24:65,0,5	0/0:5,0:2:5.98:0,6,64	0/0:7,3:3:2.95:0,3,19	./.
chr10	88640668	.	GTTA	G	2161.23	PASS	AB=0.734;AC=3;AF=0.115;AN=26;BaseQRankSum=4.767;DP=583;FS=2.349;HRun=0;HaplotypeScore=76.7365;InbreedingCoeff=-0.2229;MQ=48.20;MQ0=284;MQRankSum=-0.919;QD=9.61;ReadPosRankSum=-0.100;VQSLOD=2.8918;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:10,1:1:3.01:0,3,74	0/0:11,0:6:18.06:0,18,374	0/0:24,0:11:30.07:0,30,619	./.	./.	./.	0/0:22,0:9:6.87:0,7,218	./.	0/0:31,5:7:18.06:0,18,443	0/0:7,2:2:3.01:0,3,74	./.	0/0:13,0:1:3.01:0,3,74	./.	0/0:13,0:3:6.02:0,6,147	./.	0/0:33,2:15:24.08:0,24,590	./.	0/0:19,1:3:3.01:0,3,74	./.	0/1:89,65:115:99:1695,0,1499	./.	./.	./.	./.	0/1:24,14:18:99:301,0,264	./.	0/1:23,10:17:99:253,0,197
chr10	88640844	.	C	CA	233.89	PASS	AC=10;AF=1.00;AN=10;DP=113;FS=0.000;HRun=2;HaplotypeScore=13.7535;MQ=9.13;MQ0=88;QD=10.63;VQSLOD=1.2388;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:3,3:1:3.01:43,3,0	./.	./.	1/1:0,2:1:3.01:43,3,0	./.	1/1:2,6:4:6.02:86,6,0	./.	./.	./.	1/1:0,1:1:3.01:43,3,0	./.	./.	./.	./.	./.	./.	1/1:3,2:2:6.02:86,6,0	./.	./.
chr10	88642038	.	A	ATATAGTGTGCT	1232.08	PASS	AB=0.760;AC=9;AF=0.500;AN=18;BaseQRankSum=-2.358;DP=172;FS=0.000;HRun=0;HaplotypeScore=47.7699;MQ=13.60;MQ0=98;MQRankSum=0.625;QD=16.00;ReadPosRankSum=0.818;VQSLOD=1.4377;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:3,5:5:94.97:161,0,95	./.	./.	1/1:7,2:4:3.01:166,3,0	./.	./.	./.	./.	0/0:10,2:4:3.01:0,3,95	1/1:12,2:5:3.01:166,3,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:7,2:5:6.02:333,6,0	./.	0/0:7,0:1:3.01:0,3,101	0/1:15,2:7:99:154,0,283	./.	0/1:14,6:9:80.77:341,0,81	./.	0/0:1,0:1:3.01:0,3,101	./.
chr10	88642365	.	ATC	A	135.40	PASS	AB=0.977;AC=10;AF=0.238;AN=42;BaseQRankSum=0.599;DP=781;FS=4.139;HRun=0;HaplotypeScore=94.3366;InbreedingCoeff=0.2875;MQ=28.42;MQ0=114;MQRankSum=0.506;QD=0.53;ReadPosRankSum=-0.251;VQSLOD=1.5632;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:15:0.93:26,0,1	0/0:14,1:10:6:0,6,64	0/0:18,0:9:27.04:0,27,358	0/0:16,0:8:17.78:0,18,220	./.	0/1:35,1:17:1.17:1,0,6	./.	./.	0/0:11,1:6:4.44:0,4,15	0/0:31,0:15:0.56:0,1,2	./.	0/0:25,0:14:5.16:0,5,25	0/0:40,0:14:7.56:0,8,35	0/1:32,1:17:2.57:3,0,5	0/0:55,0:31:19.08:0,19,97	0/1:45,0:27:13.24:13,0,93	0/1:30,2:16:4.25:13,0,4	./.	0/0:13,0:8:9.20:0,9,56	0/1:46,1:33:66.99:67,0,84	./.	1/1:19,1:6:3.01:43,3,0	0/0:32,0:22:10.80:0,11,55	0/0:36,0:25:21.72:0,22,117	0/0:56,3:33:15.08:0,15,71	1/1:24,1:9:12.08:91,12,0	0/0:58,0:26:20.04:0,20,110	./.
chr10	88642367	.	C	CTA	209.69	PASS	AB=0.971;AC=10;AF=0.238;AN=42;BaseQRankSum=0.093;DP=707;FS=0.934;HRun=0;HaplotypeScore=91.6766;InbreedingCoeff=0.1846;MQ=29.40;MQ0=105;MQRankSum=-0.291;QD=0.89;ReadPosRankSum=0.614;VQSLOD=1.1476;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:14:0.64:1,0,4	0/0:13,1:9:6.02:0,6,91	0/0:19,0:9:27:0,27,344	0/0:16,0:8:17.95:0,18,221	./.	0/0:33,0:16:2.66:0,3,22	./.	./.	0/0:8,0:5:4.44:0,4,15	1/1:24,0:11:2.04:6,2,0	./.	0/0:24,0:13:5.16:0,5,25	0/0:36,0:13:7.56:0,8,35	0/1:27,1:14:2.57:3,0,5	0/0:50,0:30:17.92:0,18,75	0/0:40,0:24:5.91:0,6,83	0/1:26,4:14:4.23:13,0,4	./.	0/1:12,0:7:23.59:24,0,34	0/1:43,0:33:33.59:34,0,59	./.	0/0:17,0:6:0.89:0,1,2	0/0:30,0:22:10.80:0,11,55	0/0:35,0:25:19.65:0,20,93	0/1:56,0:33:30.91:51,0,31	1/1:24,1:9:15.61:197,16,0	0/0:53,0:25:17.92:0,18,88	./.
chr10	88644173	.	C	CA	5231.54	PASS	AB=0.754;AC=31;AF=0.705;AN=44;BaseQRankSum=-1.535;DP=1199;FS=10.132;HRun=2;HaplotypeScore=80.9617;InbreedingCoeff=-0.2918;MQ=20.17;MQ0=287;MQRankSum=0.457;QD=5.19;ReadPosRankSum=-1.041;VQSLOD=0.5684;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:21,15:17:6.02:84,6,0	0/1:53,4:45:71.14:415,0,71	./.	./.	1/1:32,20:33:17.40:231,17,0	0/0:10,12:6:5.23:0,5,40	1/1:14,5:6:8.99:106,9,0	0/1:19,9:3:28.16:75,0,28	0/1:11,14:15:28.90:36,0,29	0/1:107,20:72:99:1321,0,182	0/1:90,13:61:79.27:514,0,79	1/1:23,11:12:15.05:211,15,0	0/1:8,21:11:21.68:76,0,22	./.	1/1:13,29:17:15.05:214,15,0	./.	0/1:45,12:19:28.10:75,0,28	./.	1/1:17,3:4:6.02:84,6,0	1/1:18,4:11:10.20:160,10,0	1/1:33,4:19:3.01:43,3,0	1/1:25,9:16:16.30:292,16,0	1/1:13,14:13:2.51:158,3,0	./.	0/1:59,50:75:99:445,0,200	0/1:26,20:26:99:580,0,156	0/1:11,27:6:1.76:38,0,2	0/1:23,7:20:62.26:74,0,62
chr10	88644178	.	TGGCAGC	T	537.60	PASS	AB=0.917;AC=10;AF=0.208;AN=48;BaseQRankSum=1.287;DP=1116;FS=60.972;HRun=0;HaplotypeScore=117.4289;InbreedingCoeff=-0.1618;MQ=19.24;MQ0=294;MQRankSum=-0.064;QD=1.18;ReadPosRankSum=1.304;VQSLOD=-0.2944;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:13:6.02:0,6,225	0/1:52,2:45:62.02:62,0,1961	./.	./.	0/1:52,9:32:64.82:65,0,625	1/1:21,1:4:3.01:62,3,0	0/0:22,0:6:9.03:0,9,324	0/0:32,0:4:12.02:0,12,339	0/0:28,0:16:9.03:0,9,336	0/1:109,5:59:60.42:60,0,3850	0/1:92,4:59:99:181,0,1861	0/0:38,0:12:18.06:0,18,652	0/0:28,0:8:6.02:0,6,225	0/0:30,0:8:6.02:0,6,161	0/0:43,0:15:18.06:0,18,675	0/0:31,0:7:6.02:0,6,211	0/0:50,3:15:9.03:0,9,338	./.	0/0:20,0:3:6.02:0,6,125	0/1:18,4:12:43.62:44,0,544	0/0:32,0:13:3.01:0,3,112	0/1:26,3:14:37.68:38,0,490	0/1:21,4:12:99:101,0,520	./.	0/0:101,0:75:87.30:0,87,3236	0/0:38,0:23:60.20:0,60,2028	0/1:33,1:5:57.50:57,0,94	0/0:24,0:16:12.04:0,12,391
chr10	88644306	.	T	TG	16233.73	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.462;DP=1051;FS=5.457;HRun=1;HaplotypeScore=177.8614;InbreedingCoeff=0.7906;MQ=32.36;MQ0=106;MQRankSum=-3.637;QD=17.20;ReadPosRankSum=3.259;VQSLOD=5.2021;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,60:39:87.29:1285,87,0	1/1:5,33:19:39.08:551,39,0	0/0:52,0:6:17.52:0,18,187	0/0:54,0:3:6.02:0,6,71	1/1:4,18:10:21:286,21,0	1/1:1,11:7:18.06:268,18,0	1/1:11,13:8:8.96:101,9,0	1/1:11,15:5:6.02:89,6,0	1/1:5,27:23:33.11:492,33,0	1/1:21,93:67:99:2204,156,0	1/1:12,49:39:81.19:1163,81,0	1/1:12,25:24:28.23:651,28,0	1/1:10,22:14:20.87:271,21,0	1/1:11,16:19:30.10:447,30,0	1/1:9,27:20:27.09:402,27,0	1/1:10,23:23:30.10:429,30,0	1/1:4,63:44:99:1566,105,0	1/1:8,9:11:17.99:238,18,0	1/1:3,9:6:18.05:251,18,0	1/1:3,13:6:9.03:134,9,0	1/1:4,42:40:99:1572,108,0	1/1:4,25:16:33.11:493,33,0	1/1:2,9:6:15.05:224,15,0	1/1:9,25:23:42.04:555,42,0	1/1:9,40:24:54.01:709,54,0	1/1:4,54:37:75.21:1093,75,0	1/1:2,21:10:9.03:130,9,0	1/1:5,19:17:42.01:628,42,0
chr10	88644768	.	C	CG	6058.75	PASS	AB=0.866;AC=21;AF=0.375;AN=56;BaseQRankSum=16.950;DP=2773;FS=38.547;HRun=0;HaplotypeScore=267.5298;InbreedingCoeff=-0.5971;MQ=35.54;MQ0=320;MQRankSum=-6.029;QD=2.91;ReadPosRankSum=6.507;VQSLOD=2.3252;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:62,16:56:99:481,0,454	0/1:112,5:70:99:167,0,944	0/0:63,0:6:15.05:0,15,199	0/0:44,0:4:12.04:0,12,167	0/1:70,14:47:99:237,0,331	0/0:77,7:64:7.36:0,7,1176	0/1:76,13:77:99:398,0,515	0/0:88,8:83:98.50:0,98,3018	0/1:55,17:55:99:154,0,536	0/0:213,12:146:99:0,107,4616	0/1:184,15:121:99:290,0,1171	0/0:77,8:62:43.18:0,43,1119	0/1:61,8:52:13.30:13,0,885	0/0:88,5:79:69.41:0,69,1496	0/1:59,17:58:22:22,0,849	0/1:63,7:54:4.59:5,0,1082	0/1:194,9:154:99:246,0,1188	0/1:53,4:38:99:152,0,303	0/1:55,7:41:99:167,0,1218	0/1:91,37:81:99:488,0,1041	0/1:76,19:87:99:557,0,748	0/1:78,13:44:99:263,0,542	0/1:65,41:58:99:622,0,211	0/1:61,11:57:99:588,0,269	0/1:177,23:118:99:406,0,1403	0/1:87,24:80:99:506,0,1780	0/1:57,15:53:99:227,0,1027	0/1:27,3:24:69.31:69,0,198
chr10	88645670	.	TTCTA	T	3540.36	PASS	AB=0.879;AC=19;AF=0.365;AN=52;BaseQRankSum=-6.394;DP=2483;DS;FS=1.979;HRun=0;HaplotypeScore=323.9815;InbreedingCoeff=-0.4797;MQ=20.96;MQ0=902;MQRankSum=1.052;QD=2.06;ReadPosRankSum=0.134;VQSLOD=1.9796;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:11:6.02:0,6,161	0/1:82,3:46:22.43:22,0,2594	./.	./.	0/1:134,18:75:99:211,0,2575	0/1:71,15:46:99:224,0,1288	0/1:54,13:28:99:241,0,450	0/0:95,0:28:78.21:0,78,1958	0/0:69,0:38:39.13:0,39,998	0/1:231,17:126:99:285,0,7512	0/0:219,11:133:15.88:0,16,4320	0/1:60,10:43:99:119,0,913	0/1:58,12:42:99:337,0,883	0/1:62,15:42:59.45:59,0,1026	0/1:57,10:40:99:270,0,1043	0/1:48,15:37:99:424,0,1364	0/1:99,11:30:99:138,0,554	0/0:53,11:9:12.04:0,12,308	0/1:54,6:19:68.78:69,0,935	0/1:91,14:62:99:222,0,2896	0/0:35,0:5:3.01:0,3,81	0/1:75,9:38:99:198,0,1684	0/1:56,17:32:99:223,0,1032	1/1:21,9:11:2.97:20,3,0	0/1:141,12:98:99:213,0,5340	0/0:103,0:54:99:0,159,4152	0/1:105,17:71:99:265,0,2827	0/0:77,0:33:57.20:0,57,1485
chr10	88645686	.	CTA	C	472.80	PASS	AB=0.844;AC=4;AF=0.080;AN=50;BaseQRankSum=-1.780;DP=2391;FS=0.000;HRun=0;HaplotypeScore=298.8710;InbreedingCoeff=-0.0970;MQ=20.84;MQ0=859;MQRankSum=-1.891;QD=1.63;ReadPosRankSum=0.215;VQSLOD=1.9590;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,9:8:39.66:40,0,52	0/0:78,0:44:99:0,102,1946	./.	./.	0/0:142,0:74:99:0,108,2051	0/0:82,0:42:39.13:0,39,748	0/0:71,0:32:21.07:0,21,403	0/1:99,9:27:65.27:65,0,1106	0/1:51,13:32:99:107,0,373	0/0:239,0:121:99:0,331,6181	0/0:215,0:130:99:0,165,3150	0/0:75,0:42:30.10:0,30,576	0/0:73,0:37:48.16:0,48,920	0/0:74,0:35:18.01:0,18,344	0/0:70,0:38:32.65:0,33,633	0/0:65,1:38:62.98:0,63,1207	0/0:113,0:28:27.09:0,27,513	0/0:61,0:9:12.04:0,12,228	0/0:57,0:15:45.13:0,45,832	0/0:99,0:61:99:0,132,2524	0/0:24,2:3:3.01:0,3,58	0/0:88,0:40:78.26:0,78,1491	0/0:73,0:35:47.70:0,48,909	./.	0/0:145,0:100:99:0,193,3682	0/1:76,14:49:99:368,0,1829	0/0:121,0:67:99:0,117,2220	0/0:56,0:23:36.12:0,36,682
chr10	88645869	.	CTAA	C	1316.69	PASS	AB=0.940;AC=18;AF=0.429;AN=42;BaseQRankSum=4.131;DP=2137;FS=1.847;HRun=0;HaplotypeScore=95.3087;InbreedingCoeff=-0.4132;MQ=18.33;MQ0=1075;MQRankSum=2.355;QD=1.10;ReadPosRankSum=3.284;VQSLOD=1.3670;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/1:56,4:43:99:126,0,387	./.	./.	0/1:67,6:41:99:132,0,255	0/1:73,3:18:59.89:93,0,60	./.	0/0:46,1:2:6.02:0,6,138	0/0:61,2:17:3.01:0,3,69	0/1:142,11:59:99:153,0,2877	0/0:169,2:109:57.18:0,57,1265	1/1:57,4:21:6.02:102,6,0	0/1:68,5:18:42.19:42,0,129	./.	0/1:71,4:29:87.05:87,0,144	0/1:54,8:18:99:186,0,119	./.	1/1:49,3:16:9.03:153,9,0	0/1:60,3:13:99:114,0,606	0/1:97,7:67:50.87:51,0,1927	0/0:113,1:35:0:0,0,0	0/1:48,2:20:41.97:42,0,129	0/1:52,2:23:33.07:33,0,186	0/1:54,4:21:15.96:45,0,16	0/1:122,3:78:0.23:0,0,983	0/0:72,1:26:72.25:0,72,1653	0/1:56,7:19:87.06:87,0,192	./.
chr10	88647112	.	TCC	T	859.79	PASS	AC=22;AF=0.846;AN=26;BaseQRankSum=1.230;DP=168;FS=5.319;HRun=2;HaplotypeScore=43.6856;InbreedingCoeff=0.4659;MQ=67.89;MQ0=74;MQRankSum=-3.616;QD=13.65;ReadPosRankSum=3.202;VQSLOD=1.0898;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,1:1:3.01:49,3,0	0/0:31,0:15:40.30:0,40,685	0/0:55,0:13:25.86:0,26,390	1/1:1,3:3:3.01:47,3,0	1/1:5,3:3:3.01:47,3,0	./.	./.	./.	1/1:5,5:5:12.04:196,12,0	1/1:4,5:2:6.02:96,6,0	1/1:2,6:6:6.02:95,6,0	./.	./.	./.	./.	1/1:3,4:4:9.03:146,9,0	./.	./.	1/1:3,2:2:6.02:98,6,0	./.	1/1:0,1:1:3.01:48,3,0	1/1:2,1:1:3.01:48,3,0	./.	1/1:4,2:2:6.02:97,6,0	./.	./.	./.
chr10	88649299	.	AC	A	294.03	PASS	AC=8;AF=0.571;AN=14;BaseQRankSum=4.616;DP=79;FS=10.859;HRun=3;HaplotypeScore=31.3308;MQ=69.39;MQ0=4;MQRankSum=2.958;QD=21.00;ReadPosRankSum=2.666;VQSLOD=1.8506;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:24,0:17:48.14:0,48,656	0/0:27,0:22:57.15:0,57,765	./.	./.	./.	1/1:1,3:3:9.03:105,9,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/0:7,0:5:15.05:0,15,216	./.	1/1:0,7:7:16.92:213,17,0	./.	./.	./.	./.	1/1:0,2:1:3.01:36,3,0	./.	1/1:0,1:1:3.01:36,3,0
chr10	88649902	.	ACCTT	A	144.20	PASS	AB=0.908;AC=7;AF=0.350;AN=20;BaseQRankSum=1.408;DP=533;FS=5.880;HRun=0;HaplotypeScore=9.0653;InbreedingCoeff=-0.0739;MQ=15.83;MQ0=302;MQRankSum=0.674;QD=1.25;ReadPosRankSum=0.184;VQSLOD=-0.0836;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:41,0:1:3.01:0,3,69	./.	0/0:15,0:2:2.92:0,3,17	./.	./.	1/1:34,5:6:3.01:49,3,0	1/1:19,1:6:3.01:60,3,0	0/1:15,1:4:53.85:54,0,78	./.	./.	./.	./.	./.	./.	./.	0/1:9,2:6:53.82:54,0,78	0/1:27,2:4:17.98:18,0,78	./.	./.	./.	./.	./.	./.	0/0:16,1:5:9.03:0,9,249	0/0:14,0:3:2.71:0,3,41	0/0:16,0:3:3.01:0,3,84
chr10	88650021	.	TAGAC	T	78.14	PASS	AC=6;AF=0.273;AN=22;BaseQRankSum=3.108;DP=217;FS=1.821;HRun=0;HaplotypeScore=27.0835;InbreedingCoeff=0.4199;MQ=52.48;MQ0=47;MQRankSum=0.430;QD=4.60;ReadPosRankSum=0.303;VQSLOD=1.2605;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:42,0:22:37.68:0,38,936	0/0:44,0:22:54.19:0,54,1057	./.	./.	./.	./.	./.	1/1:0,3:3:3.01:56,3,0	1/1:4,4:5:3.01:56,3,0	./.	./.	0/0:7,0:2:0:0,0,0	./.	./.	./.	./.	0/0:7,0:1:3.01:0,3,80	0/0:6,1:5:3.01:0,3,50	./.	1/1:0,6:6:3.01:56,3,0	0/0:5,1:4:5.93:0,6,67	./.	./.	0/0:2,0:1:3.01:0,3,80	0/0:3,2:4:3.01:0,3,80	./.
chr10	88650077	.	C	CTCTG	71.34	PASS	AB=0.588;AC=5;AF=0.313;AN=16;BaseQRankSum=2.637;DP=116;FS=19.956;HRun=0;HaplotypeScore=23.1965;MQ=44.02;MQ0=19;MQRankSum=0.825;QD=3.75;ReadPosRankSum=0.929;VQSLOD=-0.1453;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:1,0:1:3.01:0,3,57	0/0:24,0:2:3.01:0,3,63	0/0:30,0:1:3.01:0,3,53	1/1:6,1:6:2.74:12,3,0	./.	./.	./.	./.	1/1:1,1:2:3.01:57,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/0:5,3:8:8.99:0,9,139	./.	./.	0/1:3,7:9:47.70:83,0,48	./.	0/0:4,0:5:3.01:0,3,57	./.	./.	./.
chr10	88650082	.	GC	G	106.53	PASS	AB=0.571;AC=6;AF=0.375;AN=16;BaseQRankSum=2.776;DP=104;FS=9.890;HRun=1;HaplotypeScore=21.6904;MQ=46.47;MQ0=8;MQRankSum=-1.356;QD=4.10;ReadPosRankSum=0.839;VQSLOD=-0.5225;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:1,0:1:2.68:0,3,11	0/0:22,0:2:6.02:0,6,95	0/0:27,0:1:3.01:0,3,48	1/1:2,4:6:3.01:42,3,0	./.	./.	./.	./.	1/1:0,2:2:3.01:34,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/1:3,5:8:7.94:36,0,8	./.	./.	0/1:1,9:9:0.05:78,0,0	./.	0/0:2,3:5:2.74:0,3,12	./.	./.	./.
chr10	88650227	.	A	AT	339.91	PASS	AC=14;AF=1.000;AN=14;DP=84;FS=0.000;HRun=3;HaplotypeScore=16.9143;MQ=15.92;MQ0=36;QD=12.59;VQSLOD=1.7921;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	1/1:0,2:2:6.02:84,6,0	1/1:0,3:3:5.98:62,6,0	./.	./.	./.	./.	1/1:1,0:1:2.94:18,3,0	./.	1/1:0,2:2:2.98:21,3,0	./.	1/1:0,2:2:3.01:42,3,0	./.	./.	./.	1/1:6,7:8:11.95:142,12,0	./.	./.	./.	./.	./.	./.	1/1:1,3:4:2.80:42,3,0	./.
chr10	88650601	.	CTAA	C	4739.94	PASS	AB=0.642;AC=31;AF=0.620;AN=50;BaseQRankSum=-1.973;DP=424;FS=7.184;HRun=0;HaplotypeScore=89.0612;InbreedingCoeff=-0.2776;MQ=28.19;MQ0=59;MQRankSum=-0.905;QD=13.39;ReadPosRankSum=4.973;VQSLOD=3.7131;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:6,11:12:41.90:381,0,42	1/1:3,0:2:3.01:49,3,0	0/0:30,0:2:5.99:0,6,67	0/0:22,0:3:9.03:0,9,155	0/0:2,1:2:3:0,3,26	1/1:5,22:17:24.08:408,24,0	0/1:3,12:8:47.09:138,0,47	0/1:6,7:4:57.05:111,0,57	0/1:9,13:16:99:423,0,116	0/1:13,11:16:99:177,0,279	./.	0/1:6,15:15:99:372,0,125	0/1:10,17:16:23.54:429,0,24	1/1:8,16:17:21.07:357,21,0	0/1:17,11:19:71.49:378,0,71	0/1:15,9:13:32.71:237,0,33	./.	0/1:1,9:5:44.68:45,0,45	0/1:13,9:6:32.92:156,0,33	1/1:1,5:4:6.02:102,6,0	1/1:0,12:7:9.50:154,10,0	1/1:0,3:2:6.02:102,6,0	1/1:1,5:5:6.02:102,6,0	1/1:1,8:5:3.01:51,3,0	1/1:0,4:3:3.01:51,3,0	0/1:5,4:6:87.09:87,0,192	0/1:13,15:17:20.68:429,0,21	./.
chr10	88651764	.	G	GA	55.32	PASS	AB=0.815;AC=3;AF=0.054;AN=56;BaseQRankSum=3.977;DP=1137;FS=14.664;HRun=0;HaplotypeScore=328.1231;InbreedingCoeff=-0.0717;MQ=49.76;MQ0=22;MQRankSum=-2.115;QD=1.78;ReadPosRankSum=-0.098;VQSLOD=1.1528;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:58:99:0,150,2073	0/0:28,1:24:63.21:0,63,864	0/0:25,0:24:67.11:0,67,909	0/0:12,0:12:30.06:0,30,358	0/1:8,5:12:35.70:36,0,88	0/0:11,1:8:15.05:0,15,199	0/0:5,0:4:12.03:0,12,143	0/0:68,0:63:99:0,172,2358	0/0:49,0:45:99:0,117,1632	0/0:79,2:74:99:0,202,2791	0/0:60,1:54:99:0,126,1690	0/1:7,1:4:35.83:42,0,36	0/0:46,0:38:87.29:0,87,1214	0/1:8,2:8:77.43:77,0,137	0/0:53,0:47:99:0,123,1671	0/0:49,0:41:93.31:0,93,1290	0/0:42,0:40:99:0,99,1381	0/0:1,0:1:3.01:0,3,42	0/0:28,0:23:57.18:0,57,783	0/0:89,7:78:99:0,151,2628	0/0:34,0:31:84.28:0,84,1164	0/0:2,2:3:3.01:0,3,35	0/0:66,4:64:99:0,157,2098	0/0:20,0:16:29.97:0,30,421	0/0:87,4:76:99:0,190,2619	0/0:58,0:56:99:0,150,2059	0/0:57,0:46:99:0,126,1728	0/0:55,0:54:99:0,159,2184
chr10	88651771	.	GATCT	G	3554.59	PASS	AB=0.964;AC=14;AF=0.269;AN=52;BaseQRankSum=4.464;DP=1045;FS=26.744;HRun=0;HaplotypeScore=331.8216;InbreedingCoeff=0.5426;MQ=49.08;MQ0=14;MQRankSum=-2.574;QD=8.34;ReadPosRankSum=-0.393;VQSLOD=1.2478;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:58:62.67:0,63,656	0/0:29,0:25:27:0,27,426	0/0:29,0:25:47.59:0,48,688	0/0:10,0:10:24.02:0,24,333	0/0:13,0:12:2.68:0,3,11	0/0:12,0:8:2.96:0,3,19	./.	0/0:63,0:57:77.67:0,78,1127	0/0:41,0:39:56.05:0,56,556	0/0:73,0:71:99:0,115,1727	0/0:57,0:53:62.78:0,63,1019	0/0:8,0:4:2.68:0,3,11	1/1:36,7:35:30.63:543,31,0	0/0:9,0:8:8.76:0,9,62	1/1:47,0:43:18.21:163,18,0	0/1:34,4:32:1.13:432,0,1	0/0:38,0:36:60.96:0,61,800	0/0:1,0:1:0.47:0,0,1	1/1:19,2:17:12.51:182,13,0	0/1:83,0:68:15.28:766,0,15	0/0:30,0:27:38.71:0,39,472	./.	1/1:59,5:63:23.67:498,24,0	0/1:17,1:17:7.60:200,0,8	0/0:78,0:67:99:0,124,1368	0/1:53,0:50:18.25:18,0,745	1/1:44,8:43:4.72:751,5,0	0/0:50,0:49:29.95:0,30,885
chr10	88651779	.	TATCTATCA	T	5753.25	PASS	AB=1.000;AC=21;AF=0.404;AN=52;BaseQRankSum=2.798;DP=955;FS=1.477;HRun=0;HaplotypeScore=359.8153;InbreedingCoeff=0.5782;MQ=49.78;MQ0=13;MQRankSum=-4.721;QD=12.84;ReadPosRankSum=0.626;VQSLOD=2.3398;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:51:85.05:0,85,1256	0/1:29,0:27:53.48:53,0,535	0/0:25,0:21:47.83:0,48,959	0/0:15,0:10:26.72:0,27,553	0/0:12,0:11:2.68:0,3,11	1/1:13,0:8:0.94:2,1,0	./.	0/0:57,0:50:99:0,107,2083	0/0:43,0:39:81.23:0,81,1280	0/1:69,0:66:99:169,0,1895	0/0:58,0:52:0.95:0,1,1552	0/0:7,0:4:2.68:0,3,11	1/1:37,1:30:47.93:779,48,0	0/1:11,0:9:7.80:8,0,22	1/1:38,0:33:25.81:256,26,0	1/1:34,1:28:20.31:665,20,0	0/0:37,0:35:0.33:0,0,1018	0/0:1,0:1:0:0,0,0	1/1:13,0:12:20.99:316,21,0	1/1:72,7:61:5.26:1281,5,0	0/0:25,0:23:54.13:0,54,898	./.	1/1:57,0:54:34.45:729,34,0	1/1:16,0:15:20.21:347,20,0	0/0:76,0:64:99:0,153,2662	0/0:49,0:46:63.50:0,63,1603	1/1:49,1:43:25.75:1148,26,0	0/0:43,0:43:99:0,121,1991
chr10	88651783	.	TATCA	T	4490.54	PASS	AB=0.988;AC=34;AF=0.654;AN=52;BaseQRankSum=4.914;DP=907;FS=1.163;HRun=0;HaplotypeScore=307.2875;InbreedingCoeff=-0.0986;MQ=48.48;MQ0=13;MQRankSum=-1.918;QD=5.23;ReadPosRankSum=3.105;VQSLOD=3.2629;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:48,0:46:99:135,0,191	0/1:29,0:27:60.73:61,0,213	0/0:24,0:18:22.14:0,22,250	0/0:19,0:11:20.80:0,21,207	0/1:12,0:11:0.03:0,0,0	1/1:13,0:8:0.47:1,0,0	./.	0/1:50,0:43:99:295,0,372	0/1:40,0:36:99:290,0,131	0/1:67,0:64:99:337,0,710	0/1:55,0:49:33.57:34,0,465	0/1:7,0:4:0.02:0,0,0	1/1:35,0:27:35.51:277,36,0	0/1:11,0:9:12:12,0,16	1/1:33,0:29:15.27:97,15,0	1/1:34,0:27:29.66:230,30,0	0/1:34,0:32:39.21:39,0,313	1/1:1,0:1:2.96:19,3,0	1/1:11,0:10:19.76:152,20,0	1/1:75,0:58:70.96:522,71,0	0/1:25,0:23:87.21:87,0,147	./.	1/1:51,0:48:33.56:239,34,0	1/1:15,0:14:17.57:136,18,0	0/1:73,0:61:99:185,0,413	0/1:44,4:45:99:424,0,171	1/1:50,0:43:77.62:540,78,0	0/1:37,4:41:99:379,0,318
chr10	88651807	.	TATCTATCTATCG	T	4641.39	PASS	AB=1.000;AC=33;AF=0.660;AN=50;BaseQRankSum=-3.706;DP=809;FS=25.315;HRun=0;HaplotypeScore=342.9905;InbreedingCoeff=0.0186;MQ=36.90;MQ0=31;MQRankSum=2.636;QD=6.67;ReadPosRankSum=0.563;VQSLOD=1.9937;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:35:15.84:217,0,16	1/1:21,2:22:22.22:243,22,0	0/0:31,0:9:15.75:0,16,309	0/0:38,0:9:19.76:0,20,314	./.	0/0:11,0:6:0.89:0,1,2	1/1:7,0:5:2.88:15,3,0	0/1:40,0:21:23.71:24,0,77	0/1:39,0:36:83.77:427,0,84	0/1:51,0:46:54.51:644,0,55	1/1:47,2:39:34.12:347,34,0	./.	1/1:28,0:22:25.02:167,25,0	0/1:13,0:10:6.96:11,0,7	0/1:22,0:19:0.60:26,0,1	1/1:27,0:20:20.96:181,21,0	0/1:26,0:23:41.76:95,0,42	0/1:4,0:4:2.35:2,0,8	1/1:15,0:9:14.29:102,14,0	0/1:57,0:41:14.58:347,0,15	1/1:18,0:17:23.21:155,23,0	./.	1/1:42,0:36:13.90:128,14,0	1/1:17,0:16:8.66:64,9,0	0/1:72,0:59:78.20:409,0,78	1/1:35,0:31:11.88:406,12,0	0/1:40,0:35:25.97:331,0,26	1/1:35,0:28:36.06:301,36,0
chr10	88651815	.	TATCG	T	6335.60	PASS	AB=1.000;AC=44;AF=0.846;AN=52;BaseQRankSum=1.798;DP=809;FS=25.212;HRun=0;HaplotypeScore=281.1175;InbreedingCoeff=0.4946;MQ=38.99;MQ0=36;MQRankSum=-0.931;QD=9.30;ReadPosRankSum=-2.134;VQSLOD=2.4697;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:38:51.45:409,51,0	1/1:24,0:20:6.89:115,7,0	0/0:40,0:13:8.28:0,8,134	0/0:47,0:15:13.71:0,14,141	./.	1/1:9,0:5:0.46:1,0,0	1/1:7,0:5:2.90:16,3,0	1/1:35,0:17:24.07:153,24,0	1/1:37,0:34:84.81:563,85,0	1/1:51,0:44:23.39:500,23,0	1/1:42,0:32:28.79:305,29,0	0/0:9,0:4:0:0,0,0	1/1:27,0:23:35.85:277,36,0	0/1:14,0:11:12.95:13,0,16	1/1:27,0:24:18.46:124,18,0	1/1:27,0:19:28.39:240,28,0	0/1:23,0:20:13.52:98,0,14	1/1:5,0:5:3.71:21,4,0	1/1:14,0:7:17.15:128,17,0	1/1:54,0:39:71.02:516,71,0	1/1:18,0:18:29.54:233,30,0	./.	1/1:39,0:32:30.42:204,30,0	1/1:14,0:12:11.54:89,12,0	1/1:63,7:57:83.41:690,83,0	1/1:33,0:28:65.23:574,65,0	1/1:43,0:38:93.98:658,94,0	1/1:28,0:20:52.21:406,52,0
chr10	88651818	.	CGA	C	508.88	PASS	AB=0.940;AC=14;AF=0.259;AN=54;BaseQRankSum=3.215;DP=770;FS=35.703;HRun=0;HaplotypeScore=273.9512;InbreedingCoeff=-0.1468;MQ=39.19;MQ0=35;MQRankSum=-3.149;QD=1.54;ReadPosRankSum=0.842;VQSLOD=1.0477;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,1:35:30.60:0,31,308	0/1:20,2:18:24.46:24,0,148	0/0:40,0:12:26.74:0,27,429	0/0:52,0:17:30.72:0,31,582	0/1:20,0:17:0:0,0,0	1/1:9,0:5:0.47:1,0,0	0/0:6,0:4:3:0,3,27	0/0:30,1:14:38.75:0,39,353	0/1:35,1:35:90.09:90,0,411	0/1:40,10:43:99:164,0,610	0/0:38,3:30:41.16:0,41,287	0/1:8,0:3:0.01:0,0,0	0/1:23,1:22:14.42:14,0,166	0/0:12,0:9:1.78:0,2,11	0/0:17,4:19:17.92:0,18,145	0/1:22,5:19:65.50:65,0,119	0/1:19,2:18:47.75:48,0,212	0/0:5,0:5:6.89:0,7,64	0/1:13,1:7:33.83:34,0,65	0/0:52,0:39:13.07:0,13,335	0/0:17,1:18:29.19:0,29,176	./.	0/0:32,4:30:28.88:0,29,209	0/0:12,0:11:11.91:0,12,88	0/0:66,3:56:47.95:0,48,681	0/1:28,3:26:99:107,0,149	0/1:40,0:36:38.91:39,0,476	0/1:28,0:20:57.26:57,0,239
chr10	88651822	.	CTA	C	359.31	PASS	AB=0.945;AC=10;AF=0.185;AN=54;BaseQRankSum=5.135;DP=810;FS=28.868;HRun=0;HaplotypeScore=287.4701;InbreedingCoeff=0.0290;MQ=39.22;MQ0=35;MQRankSum=-6.472;QD=1.46;ReadPosRankSum=-1.190;VQSLOD=1.2901;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:12.54:0,13,613	0/0:21,0:15:21.54:0,22,316	0/0:39,0:11:27.09:0,27,439	0/0:55,0:18:33.82:0,34,477	0/1:23,0:18:0:0,0,0	1/1:9,0:5:0.47:1,0,0	0/0:7,0:5:3.01:0,3,44	0/0:31,0:14:38.94:0,39,484	0/1:35,5:38:99:153,0,826	0/0:51,1:43:59.19:0,59,1350	0/0:42,0:30:39.10:0,39,528	0/1:8,0:3:0.01:0,0,0	0/0:25,0:23:19.81:0,20,271	0/0:13,0:10:2.05:0,2,17	0/0:27,0:22:15.73:0,16,254	0/0:28,0:19:24.20:0,24,307	0/0:24,0:21:22.67:0,23,449	0/0:5,0:5:6.91:0,7,100	0/1:12,0:6:7.48:7,0,135	0/1:54,3:43:89.22:89,0,561	0/0:20,0:20:33.82:0,34,403	./.	0/0:42,0:34:30.03:0,30,349	0/0:17,0:14:9.88:0,10,153	0/0:63,0:50:96.15:0,96,1321	0/1:26,2:23:59.63:60,0,490	0/1:36,4:36:46.93:47,0,951	0/1:25,4:21:99:119,0,528
chr10	88651826	.	CTA	C	218.15	PASS	AB=0.993;AC=8;AF=0.154;AN=52;BaseQRankSum=7.077;DP=836;FS=7.235;HRun=0;HaplotypeScore=297.0661;InbreedingCoeff=0.0070;MQ=38.69;MQ0=35;MQRankSum=-8.011;QD=1.07;ReadPosRankSum=-0.615;VQSLOD=1.3072;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,1:40:41.50:0,41,665	0/0:22,1:17:23.88:0,24,340	0/0:42,0:12:27.09:0,27,457	0/0:58,0:18:34.09:0,34,502	./.	1/1:9,0:5:0.47:1,0,0	0/0:9,1:7:3.01:0,3,45	0/0:31,0:14:35.25:0,35,397	0/0:38,0:36:18.02:0,18,845	0/0:56,0:47:74.13:0,74,1575	0/0:43,0:30:36.11:0,36,526	0/1:8,0:3:0:0,0,0	0/0:26,2:26:13.78:0,14,184	0/0:13,0:10:2.05:0,2,17	0/0:31,0:26:18.72:0,19,268	0/1:29,0:20:12.73:13,0,242	0/0:25,0:22:25.51:0,26,466	0/0:6,0:5:7.27:0,7,101	0/0:8,0:5:11.08:0,11,111	0/1:55,1:41:99:271,0,527	0/0:18,0:18:30.94:0,31,409	./.	0/0:43,0:34:1.05:0,1,248	0/0:17,0:14:7.35:0,7,129	0/0:63,1:51:55.28:0,55,1020	0/1:29,0:24:9.13:9,0,362	0/1:42,1:39:17.46:17,0,837	0/1:29,0:21:15.46:15,0,422
chr10	88651830	.	CTA	C	1212.56	PASS	AB=0.979;AC=14;AF=0.269;AN=52;BaseQRankSum=5.833;DP=851;FS=7.835;HRun=0;HaplotypeScore=298.8519;InbreedingCoeff=-0.2024;MQ=39.81;MQ0=32;MQRankSum=-6.944;QD=3.07;ReadPosRankSum=-2.438;VQSLOD=1.0127;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:38.45:0,38,621	0/0:26,0:18:24.07:0,24,314	0/0:49,0:18:42.03:0,42,602	0/0:57,0:18:30.63:0,31,454	./.	1/1:8,0:5:0.47:1,0,0	0/0:10,0:7:3.01:0,3,45	0/0:35,0:17:9.61:0,10,400	0/0:38,0:36:44.53:0,45,878	0/0:55,0:47:60.79:0,61,1335	0/0:44,0:31:33.01:0,33,422	0/1:6,0:3:0:0,0,0	0/1:28,0:26:99:128,0,130	0/0:13,0:10:2.05:0,2,17	0/1:31,0:26:0.58:1,0,185	0/1:25,3:21:57.94:58,0,228	0/0:28,0:24:19.66:0,20,380	0/0:5,0:4:8.69:0,9,91	0/1:9,0:8:2.35:2,0,198	0/1:55,0:41:99:148,0,597	0/1:20,0:20:11.95:12,0,385	./.	0/1:44,1:37:99:150,0,231	0/0:15,0:12:4.76:0,5,88	0/1:60,2:49:99:270,0,707	0/1:27,2:23:99:211,0,437	0/1:44,2:42:99:233,0,764	0/1:28,0:20:99:128,0,342
chr10	88651834	.	CTA	C	1404.25	PASS	AB=0.891;AC=15;AF=0.288;AN=52;BaseQRankSum=6.497;DP=850;FS=5.007;HRun=0;HaplotypeScore=294.8024;InbreedingCoeff=-0.2991;MQ=39.94;MQ0=30;MQRankSum=-6.609;QD=3.12;ReadPosRankSum=-3.372;VQSLOD=1.5728;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,4:41:5.24:0,5,580	0/0:27,0:19:27.01:0,27,370	0/0:48,0:19:39.06:0,39,586	0/0:58,0:21:34.02:0,34,462	./.	1/1:7,0:4:0.47:1,0,0	0/0:9,0:7:3.01:0,3,40	0/1:34,1:18:11.35:11,0,368	0/1:35,3:36:61.71:62,0,895	0/0:53,1:47:33.27:0,33,1378	0/0:38,2:27:33.44:0,33,496	0/1:5,0:2:0:0,0,0	0/1:22,7:26:99:166,0,138	0/0:11,1:10:2.05:0,2,17	0/1:29,4:29:71.99:72,0,172	0/1:28,3:24:97.42:97,0,297	0/0:30,0:26:16.61:0,17,355	0/0:5,0:4:0.12:0,0,37	0/1:14,1:13:18.64:19,0,380	0/1:45,8:42:99:173,0,555	0/0:17,0:17:26.32:0,26,376	./.	0/1:35,6:32:99:102,0,232	0/0:14,0:12:6.85:0,7,106	0/1:50,13:49:99:405,0,706	0/1:24,6:24:99:129,0,605	0/1:38,7:43:99:251,0,810	0/1:21,4:18:52.66:53,0,319
chr10	88651840	.	ATCT	A	9698.13	PASS	AB=0.984;AC=45;AF=0.833;AN=54;BaseQRankSum=-4.055;DP=835;FS=15.612;HRun=0;HaplotypeScore=264.4602;InbreedingCoeff=0.3415;MQ=40.76;MQ0=21;MQRankSum=2.622;QD=13.51;ReadPosRankSum=5.792;VQSLOD=3.1255;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,4:38:37.06:741,37,0	1/1:26,0:17:8.94:174,9,0	0/0:48,0:19:38.81:0,39,501	0/0:53,0:20:41.70:0,42,569	0/1:27,0:17:0.01:0,0,0	1/1:6,0:4:3.01:32,3,0	1/1:10,0:7:3.01:45,3,0	1/1:39,0:21:25.10:260,25,0	0/1:39,2:40:37.37:998,0,37	1/1:48,0:42:39.02:794,39,0	1/1:38,0:27:35.88:340,36,0	0/1:5,0:2:0:0,0,0	0/1:36,0:33:11.76:415,0,12	1/1:10,0:9:3.01:32,3,0	1/1:32,0:29:2.93:231,3,0	1/1:30,0:24:8.20:510,8,0	1/1:30,0:25:16.93:192,17,0	1/1:5,0:4:9.02:116,9,0	1/1:17,0:12:35.99:519,36,0	1/1:48,0:38:36.32:634,36,0	1/1:13,4:17:28.18:430,28,0	./.	1/1:40,0:29:16.98:315,17,0	1/1:14,0:12:10.54:141,11,0	0/1:60,0:45:65.42:488,0,65	1/1:32,0:25:2.43:797,2,0	1/1:41,0:39:18.62:963,19,0	1/1:24,2:20:38.42:529,38,0
chr10	88651842	.	CT	C	1331.36	PASS	AB=0.912;AC=35;AF=0.648;AN=54;BaseQRankSum=0.057;DP=832;FS=2.524;HRun=2;HaplotypeScore=277.6207;InbreedingCoeff=0.0335;MQ=41.44;MQ0=18;MQRankSum=-0.023;QD=1.98;ReadPosRankSum=2.494;VQSLOD=-0.6649;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,2:37:2.24:61,0,2	0/1:20,5:17:37.69:57,0,38	0/0:48,0:21:39.08:0,39,512	0/0:53,0:21:41.95:0,42,585	0/1:25,3:17:0:0,0,0	1/1:6,0:4:3:31,3,0	1/1:10,0:7:2.98:21,3,0	0/1:23,9:18:23.95:104,0,24	0/1:42,1:42:63.65:103,0,64	0/1:38,10:42:99:293,0,111	0/0:36,2:28:9.49:0,9,114	0/1:5,0:2:0:0,0,0	0/1:33,4:34:19.74:100,0,20	1/1:10,0:9:3.01:32,3,0	1/1:28,3:29:13.31:41,13,0	0/1:28,3:25:4.05:34,0,4	0/1:25,3:23:17.59:85,0,18	1/1:5,0:4:6.81:34,7,0	1/1:15,2:12:19.36:54,19,0	1/1:44,3:37:17.72:83,18,0	1/1:18,0:18:10.45:65,10,0	./.	1/1:38,2:29:12.72:36,13,0	1/1:15,0:13:9.63:38,10,0	0/1:55,3:45:3.21:3,0,126	0/1:29,3:25:52.72:76,0,53	0/1:43,0:41:9.61:55,0,10	1/1:22,2:20:19.47:82,19,0
chr10	88651843	.	T	TA	10049.25	PASS	AB=0.568;AC=44;AF=0.846;AN=52;BaseQRankSum=-3.803;DP=844;FS=20.280;HRun=0;HaplotypeScore=244.9899;InbreedingCoeff=0.3321;MQ=41.49;MQ0=17;MQRankSum=2.260;QD=14.42;ReadPosRankSum=8.117;VQSLOD=4.2517;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:14,20:39:32.79:723,33,0	1/1:15,12:17:9.14:170,9,0	0/0:49,0:21:38.81:0,39,465	0/0:54,0:21:41.24:0,41,568	./.	1/1:0,6:4:3:31,3,0	1/1:3,7:7:3.01:42,3,0	1/1:26,5:20:19.02:282,19,0	0/1:12,27:44:38.73:990,0,39	1/1:22,19:41:59.37:830,59,0	1/1:29,13:31:36:356,36,0	0/1:0,4:2:0:0,0,0	0/1:12,25:35:7.28:431,0,7	1/1:3,4:7:3.01:32,3,0	1/1:9,20:31:1.47:218,1,0	1/1:8,21:26:8.29:495,8,0	1/1:4,17:21:18.46:250,18,0	1/1:0,4:4:9.03:125,9,0	1/1:4,12:13:39.02:527,39,0	1/1:16,27:36:36.34:638,36,0	1/1:4,14:18:29.50:447,29,0	./.	1/1:12,26:30:16.98:301,17,0	1/1:3,11:14:11.76:176,12,0	0/1:20,32:46:72.38:702,0,72	1/1:11,17:26:2.44:794,2,0	1/1:10,35:44:21.85:975,22,0	1/1:13,8:20:38.93:514,39,0
chr10	88651846	.	TATC	T	67.16	PASS	AB=0.980;AC=8;AF=0.154;AN=52;BaseQRankSum=5.495;DP=830;FS=13.423;HRun=0;HaplotypeScore=281.8620;InbreedingCoeff=0.0186;MQ=42.94;MQ0=16;MQRankSum=-2.360;QD=0.34;ReadPosRankSum=-1.139;VQSLOD=0.7991;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:35.01:0,35,274	0/1:26,1:17:33.74:34,0,39	0/0:44,0:20:48.13:0,48,855	0/0:56,0:25:53.16:0,53,1047	0/1:25,1:15:0.01:0,0,0	0/0:6,0:4:2.90:0,3,16	1/1:9,1:7:2.37:8,2,0	0/1:26,0:17:42.26:42,0,268	0/0:43,0:42:70.39:0,70,578	0/0:48,1:43:35.89:0,36,465	0/1:41,1:30:30.51:31,0,52	./.	0/0:36,0:33:7.21:0,7,178	0/0:6,0:6:2.88:0,3,15	0/0:35,0:32:0.72:0,1,179	0/1:32,0:25:40.31:40,0,135	0/0:24,0:21:12.45:0,12,82	0/0:5,0:4:1.23:0,1,25	0/0:19,0:15:19.53:0,20,367	0/0:44,2:34:24.32:0,24,311	0/0:18,0:18:30.12:0,30,234	./.	0/0:38,3:29:8.03:0,8,224	0/0:16,0:14:12.30:0,12,129	0/0:56,1:44:43.75:0,44,470	0/1:31,0:25:29.12:29,0,397	0/0:44,0:42:25.72:0,26,428	0/0:23,0:20:17.62:0,18,279
chr10	88651847	.	A	ATC	58.99	PASS	AB=0.979;AC=10;AF=0.192;AN=52;BaseQRankSum=7.866;DP=848;FS=1.550;HRun=0;HaplotypeScore=283.1794;InbreedingCoeff=0.3195;MQ=42.91;MQ0=15;MQRankSum=-6.939;QD=0.48;ReadPosRankSum=-2.761;VQSLOD=2.0488;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,2:41:52.93:0,53,642	0/0:27,0:17:17.04:0,17,85	0/0:44,0:21:32.95:0,33,387	0/0:54,0:25:44.27:0,44,616	./.	1/1:6,0:4:1.25:3,1,0	1/1:10,0:7:2.37:8,2,0	0/1:30,3:20:99:111,0,198	0/0:42,0:41:58.67:0,59,917	0/0:49,0:43:37.29:0,37,507	0/0:44,0:30:28.35:0,28,138	0/1:5,0:2:0:0,0,0	0/1:38,0:34:22.99:23,0,264	1/1:7,0:6:1.25:3,1,0	0/0:36,1:34:21.05:0,21,252	0/0:31,1:25:28.37:0,28,359	0/1:24,0:21:19.15:19,0,104	0/0:5,0:4:2.13:0,2,39	0/0:21,0:16:48.09:0,48,573	0/0:47,1:36:35.51:0,36,487	0/0:19,0:18:20.95:0,21,288	./.	0/0:41,0:29:27.04:0,27,325	0/0:18,0:16:14.49:0,14,169	0/0:58,0:44:53.32:0,53,693	0/0:29,2:25:48.18:0,48,625	0/0:45,0:43:72.19:0,72,889	0/0:24,0:21:19.41:0,19,371
chr10	88651849	.	CTATCTA	C	200.85	PASS	AB=0.964;AC=6;AF=0.115;AN=52;BaseQRankSum=6.792;DP=872;FS=14.097;HRun=0;HaplotypeScore=314.0575;InbreedingCoeff=0.2163;MQ=43.06;MQ0=17;MQRankSum=-6.046;QD=1.88;ReadPosRankSum=-2.590;VQSLOD=0.8458;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:43:23.51:0,24,747	0/0:27,0:17:20.90:0,21,288	0/0:38,0:18:39.11:0,39,1013	0/0:52,0:25:45.26:0,45,1371	0/1:26,1:16:0:0,0,0	0/0:6,0:4:2.49:0,2,9	1/1:11,0:7:3.01:60,3,0	0/1:36,0:22:99:164,0,438	0/0:43,0:42:22.67:0,23,1306	0/0:50,2:45:25.17:0,25,1307	0/0:46,0:32:54.05:0,54,776	./.	0/0:41,0:37:26.77:0,27,529	0/0:7,0:6:2.50:0,2,9	0/0:40,0:37:24.49:0,24,484	0/0:33,0:25:39.07:0,39,462	0/0:23,0:20:1.30:0,1,232	0/1:5,0:4:41.33:52,0,41	0/1:24,0:20:33.26:33,0,806	0/0:46,0:35:49.88:0,50,680	0/0:19,0:18:29.89:0,30,386	./.	0/0:43,0:31:30.10:0,30,537	0/0:19,0:17:21.97:0,22,430	0/0:57,1:45:58.08:0,58,1065	0/0:32,0:26:50.47:0,50,879	0/0:47,0:45:77.99:0,78,1159	0/0:24,0:21:33.24:0,33,567
chr10	88651853	.	CTA	C	225.45	PASS	AB=0.812;AC=10;AF=0.192;AN=52;BaseQRankSum=8.011;DP=856;FS=7.771;HRun=0;HaplotypeScore=264.9912;InbreedingCoeff=0.3965;MQ=43.90;MQ0=17;MQRankSum=-6.800;QD=1.85;ReadPosRankSum=-2.593;VQSLOD=0.9884;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:11.16:0,11,708	0/0:26,0:15:24:0,24,252	0/0:30,0:17:39.11:0,39,645	0/0:46,0:26:45.23:0,45,866	0/1:21,5:15:0:0,0,0	1/1:4,1:4:3.01:33,3,0	1/1:7,4:7:3.01:44,3,0	0/1:34,7:25:99:171,0,465	0/0:42,0:41:39.97:0,40,1156	0/0:47,2:43:20.06:0,20,981	0/0:51,1:35:59.92:0,60,569	./.	0/0:40,1:38:30.13:0,30,512	1/1:6,2:7:2.84:34,3,0	0/0:43,0:40:30.75:0,31,441	0/0:32,1:26:45.08:0,45,594	0/0:18,3:18:7.67:0,8,171	0/1:2,3:4:33.54:37,0,34	0/1:24,2:21:33.28:33,0,676	0/0:43,2:33:44.60:0,45,720	0/0:20,0:19:33.52:0,34,425	./.	0/0:44,2:34:33.11:0,33,494	0/0:18,1:17:21.94:0,22,351	0/0:51,1:39:35.71:0,36,921	0/0:34,0:27:50.65:0,51,874	0/0:47,0:45:81.25:0,81,1148	0/0:22,0:19:29.71:0,30,515
chr10	88651855	.	A	ATC	311.45	PASS	AB=0.962;AC=13;AF=0.250;AN=52;BaseQRankSum=7.971;DP=865;FS=1.361;HRun=0;HaplotypeScore=260.0898;InbreedingCoeff=0.2406;MQ=43.96;MQ0=16;MQRankSum=-5.900;QD=1.44;ReadPosRankSum=-2.367;VQSLOD=2.2422;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,4:41:44.50:0,45,729	0/0:26,0:15:24.04:0,24,327	0/0:29,0:17:36.12:0,36,488	0/0:46,0:28:49.14:0,49,670	./.	1/1:5,0:4:2.80:13,3,0	1/1:13,0:9:6.02:80,6,0	0/1:36,2:23:99:227,0,409	0/0:41,3:42:25.95:0,26,1033	0/1:51,1:45:14.02:14,0,1026	0/0:52,0:34:60.08:0,60,740	0/1:3,1:1:0:0,0,0	0/1:42,0:39:31.01:31,0,423	1/1:7,0:6:2.84:14,3,0	0/0:40,2:39:36.06:0,36,427	0/0:32,1:26:42.08:0,42,510	0/1:21,0:18:3.67:4,0,185	0/1:5,0:4:35.34:35,0,37	0/1:25,0:21:33.29:33,0,606	0/0:45,0:34:44.58:0,45,639	0/0:21,0:20:32.69:0,33,376	./.	0/0:46,0:34:33.11:0,33,452	0/0:19,1:18:23.57:0,24,301	0/0:48,1:35:33.92:0,34,718	0/0:36,1:29:34.15:0,34,734	0/0:48,0:45:81.21:0,81,1067	0/0:22,0:19:17.79:0,18,431
chr10	88652025	.	C	CTTG	13773.49	PASS	AB=0.775;AC=32;AF=0.571;AN=56;BaseQRankSum=2.368;DP=1644;FS=169.247;HRun=0;HaplotypeScore=284.3744;InbreedingCoeff=-0.3851;MQ=43.40;MQ0=40;MQRankSum=-11.381;QD=8.59;ReadPosRankSum=-0.676;VQSLOD=0.5961;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:42,13:50:99:141,0,1597	0/1:24,11:36:99:513,0,771	0/0:22,0:21:60.20:0,60,961	0/0:18,0:17:51.16:0,51,814	1/1:7,7:15:17.85:238,18,0	1/1:7,37:28:57.20:1277,57,0	1/1:10,26:21:27.02:547,27,0	0/1:74,5:67:2.30:2,0,2652	0/1:57,20:66:99:439,0,2011	0/1:63,26:71:99:887,0,2009	0/1:61,9:62:66.59:67,0,1748	1/1:6,17:16:36.12:790,36,0	0/1:54,31:72:99:1073,0,1581	1/1:4,20:11:18.06:407,18,0	0/1:55,29:67:99:629,0,1509	0/1:46,23:54:99:437,0,1358	0/1:45,18:57:99:557,0,1657	1/1:7,22:20:42.14:921,42,0	0/1:39,25:51:99:894,0,1151	0/1:73,13:77:99:274,0,1804	0/1:36,8:40:40.42:40,0,1302	0/1:11,17:21:8.14:568,0,8	0/1:50,21:63:99:659,0,1367	0/1:50,24:62:99:589,0,1428	0/1:58,29:73:99:697,0,2068	0/1:64,17:69:99:506,0,2289	0/1:84,17:88:99:618,0,2492	0/1:26,6:27:1.56:2,0,978
chr10	88653199	.	T	TGG	1455.07	PASS	AB=0.874;AC=17;AF=0.327;AN=52;BaseQRankSum=9.704;DP=812;FS=18.923;HRun=0;HaplotypeScore=183.0655;InbreedingCoeff=-0.1553;MQ=65.68;MQ0=0;MQRankSum=-11.104;QD=2.99;ReadPosRankSum=0.716;VQSLOD=1.5817;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:44,5:47:99:156,0,1501	0/0:17,0:17:51.17:0,51,795	0/0:27,0:26:72.24:0,72,1140	0/0:31,0:30:84.27:0,84,1327	./.	0/1:3,1:4:42.35:47,0,42	0/1:7,3:7:35.20:103,0,35	0/1:48,9:44:20.03:20,0,1275	0/1:42,4:44:99:108,0,1533	0/0:45,1:41:62.41:0,62,1791	0/0:24,0:24:69.22:0,69,1093	1/1:9,4:13:9.03:166,9,0	0/1:30,3:30:41.17:41,0,865	0/1:9,4:12:13.73:157,0,14	0/1:38,5:43:99:174,0,1354	0/1:41,3:40:66.18:66,0,1378	0/1:22,2:24:13.10:13,0,821	1/1:1,3:4:9.03:169,9,0	0/1:39,10:45:99:271,0,1446	0/0:26,2:27:66.22:0,66,1040	0/1:44,4:47:19.01:19,0,1790	./.	0/0:19,0:18:51.17:0,51,832	0/0:28,4:29:20.01:0,20,1112	0/0:35,0:33:90.31:0,90,1462	0/0:47,2:46:76.54:0,77,1985	0/1:45,4:46:99:105,0,1560	0/0:17,0:17:42.14:0,42,680
chr10	88653202	.	A	AG	2062.20	PASS	AB=0.812;AC=22;AF=0.423;AN=52;BaseQRankSum=16.979;DP=814;FS=128.243;HRun=0;HaplotypeScore=167.5187;InbreedingCoeff=-0.0307;MQ=64.75;MQ0=4;MQRankSum=-16.379;QD=3.68;ReadPosRankSum=-0.869;VQSLOD=0.1846;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:37,8:44:97.98:98,0,1144	0/1:13,2:15:50.33:50,0,500	0/0:23,0:22:63.18:0,63,861	0/0:29,0:29:74.56:0,75,1024	./.	1/1:3,3:6:8.82:109,9,0	1/1:3,6:6:8.63:75,9,0	0/1:37,16:41:40.62:41,0,908	0/1:33,13:43:99:263,0,1019	0/1:41,8:44:35.02:35,0,1415	0/0:23,1:24:24.59:0,25,900	1/1:4,6:10:8.56:45,9,0	0/1:24,14:34:99:276,0,658	1/1:4,9:12:11.35:86,11,0	0/1:35,8:42:99:104,0,1066	0/1:31,12:39:40.32:40,0,1037	0/0:21,2:24:37.10:0,37,751	1/1:5,0:5:8.59:43,9,0	0/1:41,15:48:99:455,0,902	0/1:23,6:28:74.11:74,0,770	0/0:42,4:45:35.75:0,36,1466	./.	0/0:18,2:19:6.73:0,7,665	0/0:28,5:30:14.08:0,14,902	0/0:30,6:34:45.58:0,46,1208	0/1:40,11:48:99:220,0,1339	0/1:37,12:46:99:220,0,1118	0/0:16,1:17:3.38:0,3,623
chr10	88654217	.	GA	G	3490.57	PASS	AB=0.778;AC=19;AF=0.339;AN=56;BaseQRankSum=-8.441;DP=1395;FS=150.446;HRun=3;HaplotypeScore=348.5823;InbreedingCoeff=-0.5266;MQ=36.17;MQ0=56;MQRankSum=-4.339;QD=2.98;ReadPosRankSum=5.577;VQSLOD=-0.0993;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:50,24:50:99:323,0,390	0/1:17,6:13:53.67:54,0,148	0/0:24,0:22:43.73:0,44,750	0/0:38,0:35:77.33:0,77,1223	0/0:23,0:14:20.94:0,21,232	0/0:40,0:29:77.84:0,78,1042	0/0:14,0:11:23.22:0,23,256	0/1:54,14:51:26.97:27,0,1025	0/1:48,30:48:99:276,0,492	0/1:73,22:65:99:178,0,1384	0/1:34,14:25:99:137,0,322	0/0:29,0:15:36.09:0,36,495	0/1:73,23:62:99:232,0,1206	0/0:32,0:21:39.09:0,39,537	0/1:85,26:71:99:218,0,1289	0/1:53,10:43:61.37:61,0,648	0/1:33,14:33:99:193,0,456	0/0:3,0:2:3.01:0,3,43	0/1:45,12:32:76.37:76,0,527	0/1:22,26:33:99:248,0,130	0/1:25,5:20:78.55:90,0,79	0/0:21,0:15:20.94:0,21,232	0/1:40,14:37:99:188,0,493	0/1:42,10:36:44.55:45,0,251	0/1:21,19:29:99:243,0,179	0/1:53,28:52:99:473,0,606	0/1:73,18:59:99:200,0,1104	0/1:6,9:11:19.02:227,0,19
chr10	88654252	.	AC	A	507.44	PASS	AB=0.893;AC=8;AF=0.143;AN=56;BaseQRankSum=4.563;DP=1484;FS=85.306;HRun=2;HaplotypeScore=302.8878;InbreedingCoeff=0.0103;MQ=35.99;MQ0=87;MQRankSum=-6.873;QD=1.31;ReadPosRankSum=-0.790;VQSLOD=-0.3336;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:85,0:63:90.06:0,90,1169	0/0:22,1:18:3.49:0,3,503	0/0:24,0:19:48.14:0,48,718	0/0:27,0:19:48.15:0,48,692	1/1:12,2:6:3.01:39,3,0	0/1:34,10:29:99:218,0,386	0/1:15,2:9:20.82:21,0,204	0/0:53,0:31:75.25:0,75,1084	0/0:79,0:47:77.75:0,78,1103	0/0:82,6:66:42.78:0,43,2017	0/0:39,0:26:39.12:0,39,553	0/0:31,4:14:27:0,27,314	0/1:84,9:55:42.93:43,0,1327	0/1:29,6:21:99:152,0,323	0/1:110,11:79:99:152,0,1719	0/0:73,7:50:27.43:0,27,1244	0/0:52,1:41:81.12:0,81,1066	0/0:6,1:3:3.01:0,3,45	0/0:63,0:48:99:0,126,1830	0/0:58,1:51:52.04:0,52,1327	0/0:41,0:30:45.07:0,45,592	0/0:16,5:13:8.98:0,9,88	0/0:55,1:42:46.65:0,47,1193	0/1:61,2:50:14.51:15,0,733	0/0:49,1:39:28.11:0,28,863	0/0:82,0:59:99:0,132,1844	0/0:97,4:62:18.48:0,18,1613	0/0:31,0:28:54.18:0,54,787
chr10	88654788	.	A	ATTTGTAG	937.14	PASS	AB=0.898;AC=7;AF=0.130;AN=54;BaseQRankSum=6.048;DP=1147;FS=22.216;HRun=0;HaplotypeScore=270.4690;InbreedingCoeff=-0.1017;MQ=52.48;MQ0=57;MQRankSum=-4.951;QD=3.97;ReadPosRankSum=-0.689;VQSLOD=1.1438;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:46,2:43:38.69:39,0,2043	0/0:35,0:25:57.20:0,57,1448	0/0:22,0:19:57.20:0,57,1422	0/0:28,0:27:66.42:0,66,1740	0/0:29,0:22:21.07:0,21,386	0/1:7,1:2:56.86:113,0,57	0/1:9,4:8:99:458,0,142	0/0:78,0:53:99:0,114,3152	0/0:43,0:35:74.34:0,74,1954	0/0:71,0:54:99:0,138,3342	0/0:53,0:41:96.33:0,96,2476	0/0:11,0:5:0.89:0,1,2	0/0:49,0:37:81.24:0,81,2111	0/1:8,2:5:55.02:225,0,55	0/0:43,0:31:72.25:0,72,1902	0/0:48,0:37:98.02:0,98,2340	0/0:32,0:29:75.26:0,75,2019	./.	0/1:45,2:44:99:116,0,2873	0/0:89,1:64:99:0,135,3378	0/1:49,5:50:99:104,0,3214	0/0:14,0:9:3.01:0,3,63	0/0:54,0:40:99:0,102,2480	0/0:32,0:25:56.78:0,57,1559	0/0:67,0:48:99:0,111,2748	0/1:54,2:47:9.52:10,0,2501	0/0:74,0:54:99:0,126,3266	0/0:34,0:33:75.22:0,75,1835
chr10	88655016	.	CA	C	13091.83	PASS	AB=0.743;AC=30;AF=0.536;AN=56;BaseQRankSum=8.854;DP=1321;FS=72.958;HRun=1;HaplotypeScore=206.3421;InbreedingCoeff=-0.6071;MQ=46.02;MQ0=47;MQRankSum=-5.662;QD=10.13;ReadPosRankSum=-1.623;VQSLOD=1.0238;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,15:37:99:473,0,907	0/1:17,9:23:99:144,0,647	0/0:15,0:11:33.11:0,33,496	0/0:14,0:10:30.10:0,30,480	1/1:4,35:35:69.18:887,69,0	1/1:2,19:19:0.70:576,1,0	1/1:2,20:19:42.14:587,42,0	0/1:69,30:84:99:971,0,1964	0/1:39,20:51:99:519,0,1292	0/1:52,27:67:99:726,0,1819	0/1:55,23:64:99:542,0,1618	0/1:6,13:17:99:413,0,177	0/1:34,19:46:99:421,0,1205	0/1:4,19:23:99:610,0,129	0/1:43,16:48:99:238,0,1603	0/1:27,24:48:99:829,0,914	0/1:34,7:39:99:149,0,1227	0/1:1,10:9:14.65:307,0,15	0/1:41,7:39:99:134,0,1462	0/1:62,38:85:99:1179,0,1575	0/1:32,10:41:99:299,0,1189	1/1:0,20:17:33.11:437,33,0	0/1:42,13:47:99:366,0,1377	0/1:24,12:33:99:359,0,862	0/1:46,18:58:99:409,0,1687	0/1:52,23:69:99:682,0,1944	0/1:59,28:71:99:690,0,1812	0/1:38,8:45:99:143,0,1236
chr10	88655216	.	T	TA	6033.68	PASS	AB=0.768;AC=30;AF=0.536;AN=56;BaseQRankSum=7.780;DP=800;FS=171.680;HRun=0;HaplotypeScore=193.5546;InbreedingCoeff=-0.5657;MQ=53.32;MQ0=33;MQRankSum=-4.968;QD=7.79;ReadPosRankSum=-3.188;VQSLOD=1.2479;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,5:16:53.33:53,0,461	0/1:18,2:18:47.46:47,0,530	0/0:15,0:14:39.02:0,39,505	0/0:10,0:10:24.04:0,24,295	0/1:3,10:13:4.07:415,0,4	0/1:3,13:15:41.72:470,0,42	1/1:1,6:6:15.05:239,15,0	0/1:64,10:53:18.79:19,0,1373	0/1:22,10:30:99:235,0,786	0/1:30,10:32:99:287,0,865	0/1:44,7:46:68.45:68,0,1347	1/1:0,6:6:15.05:227,15,0	0/1:20,9:28:99:209,0,761	1/1:0,13:13:29.96:406,30,0	0/1:24,17:36:99:368,0,902	0/1:21,13:34:99:471,0,605	0/1:20,7:24:99:115,0,648	0/1:1,4:2:35.90:42,0,36	0/1:36,8:34:99:242,0,910	0/1:47,7:53:99:149,0,1454	0/1:14,8:20:99:151,0,512	1/1:1,11:9:18.06:287,18,0	0/1:34,8:39:99:199,0,1003	0/1:10,5:12:31.85:32,0,324	0/1:23,15:36:99:452,0,670	0/1:35,7:39:99:227,0,1090	0/1:38,15:49:99:451,0,1047	0/1:21,6:26:99:173,0,621
chr10	88655236	.	AG	A	13151.56	PASS	AB=0.641;AC=19;AF=0.339;AN=56;BaseQRankSum=-17.386;DP=774;FS=122.792;HRun=1;HaplotypeScore=162.7267;InbreedingCoeff=-0.5251;MQ=52.69;MQ0=29;MQRankSum=14.194;QD=19.37;ReadPosRankSum=-0.139;VQSLOD=0.6099;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:5,17:21:99:610,0,118	0/1:9,10:16:99:371,0,181	0/0:11,0:10:20.16:0,20,327	0/0:10,0:9:18.02:0,18,222	0/0:13,0:13:35:0,35,481	0/0:14,0:13:36.12:0,36,570	0/0:12,0:12:33.11:0,33,522	0/1:62,25:67:99:1006,0,1233	0/1:10,20:28:99:760,0,208	0/1:21,21:35:99:820,0,419	0/1:25,24:44:99:903,0,354	0/0:6,0:5:11.97:0,12,161	0/1:9,18:26:99:681,0,214	0/0:11,0:11:24.08:0,24,380	0/1:16,19:30:99:730,0,342	0/1:12,23:33:99:790,0,280	0/1:6,15:19:91.50:535,0,91	0/0:6,0:3:6.02:0,6,95	0/1:19,17:29:99:590,0,410	0/1:33,25:57:99:960,0,639	0/1:8,13:19:99:491,0,184	0/0:12,0:12:26.98:0,27,364	0/1:16,21:35:99:807,0,297	0/1:3,9:10:23.82:269,0,24	0/1:25,16:39:99:629,0,578	0/1:15,19:31:99:806,0,222	0/1:20,27:44:99:756,0,484	0/1:9,17:25:99:637,0,224
chr10	88656104	.	AC	A	380.71	PASS	AB=0.744;AC=13;AF=0.260;AN=50;BaseQRankSum=-1.998;DP=530;FS=4.000;HRun=1;HaplotypeScore=75.6258;InbreedingCoeff=0.2530;MQ=43.08;MQ0=97;MQRankSum=-3.141;QD=3.05;ReadPosRankSum=2.135;VQSLOD=0.1353;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,3:15:33.11:0,33,525	0/0:9,6:9:24.08:0,24,382	0/0:40,0:18:49.81:0,50,665	0/0:21,0:7:21.04:0,21,269	./.	1/1:3,6:4:3.01:42,3,0	./.	0/0:17,4:3:9.03:0,9,144	0/0:20,1:7:18.06:0,18,286	0/0:19,6:11:26.92:0,27,430	0/0:20,3:13:24.08:0,24,381	1/1:3,7:6:3.01:42,3,0	0/1:10,7:11:65.52:66,0,172	1/1:3,8:5:3.01:42,3,0	0/1:13,9:18:99:139,0,211	0/1:12,8:11:99:104,0,169	0/0:15,4:13:3.01:0,3,48	1/1:3,2:1:3.01:42,3,0	0/1:13,4:10:14.80:15,0,311	0/0:24,6:19:45.14:0,45,694	0/0:32,2:29:66.22:0,66,1043	./.	0/0:15,1:9:21.07:0,21,333	0/1:10,4:8:32.96:33,0,86	0/0:21,7:13:27.09:0,27,430	0/0:20,6:15:36.09:0,36,548	0/0:16,7:8:9.03:0,9,143	0/0:17,0:14:24.08:0,24,382
chr10	88657842	.	ACC	A	11146.25	PASS	AB=0.628;AC=26;AF=0.500;AN=52;BaseQRankSum=-9.757;DP=801;FS=85.693;HRun=3;HaplotypeScore=234.2143;InbreedingCoeff=0.0087;MQ=51.33;MQ0=20;MQRankSum=11.682;QD=17.95;ReadPosRankSum=3.110;VQSLOD=1.0403;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,20:21:99:245,0,154	1/1:1,11:12:2.20:342,2,0	0/0:43,0:38:99:0,104,1838	0/0:47,1:45:99:0,126,2309	./.	0/0:23,0:14:24.06:0,24,309	0/0:7,0:2:6.01:0,6,66	1/1:9,24:19:5.24:559,5,0	0/1:14,26:37:99:444,0,207	0/1:15,23:30:99:922,0,154	0/1:7,15:16:8.63:421,0,9	0/0:24,0:21:54.09:0,54,708	0/1:21,29:42:99:689,0,431	0/0:24,0:17:36.06:0,36,445	0/1:39,23:56:99:563,0,1029	0/1:33,18:44:99:502,0,680	0/1:4,19:22:24.80:212,0,25	./.	1/1:4,20:19:54.15:799,54,0	1/1:3,24:21:60.20:917,60,0	1/1:0,27:26:60.19:902,60,0	0/0:4,0:3:6.01:0,6,69	0/1:7,23:25:74.16:592,0,74	0/1:7,18:24:26.50:551,0,27	1/1:5,22:24:45.15:680,45,0	0/1:20,25:40:99:971,0,357	0/1:24,20:35:99:424,0,558	1/1:2,11:11:27.09:411,27,0
chr10	88657902	.	C	CTA	1316.74	PASS	AB=0.928;AC=20;AF=0.400;AN=50;BaseQRankSum=12.272;DP=669;FS=53.907;HRun=0;HaplotypeScore=162.7601;InbreedingCoeff=-0.0445;MQ=59.80;MQ0=11;MQRankSum=-11.952;QD=3.22;ReadPosRankSum=0.088;VQSLOD=0.7543;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:36.12:0,36,513	0/1:15,0:14:12:12,0,316	0/0:35,0:29:72.23:0,72,1003	0/0:36,0:32:81.27:0,81,1137	1/1:6,7:11:18.41:239,18,0	./.	1/1:0,3:3:3.01:55,3,0	0/0:33,0:28:64.11:0,64,950	0/0:19,0:19:33.11:0,33,471	0/1:40,5:37:99:236,0,908	0/1:33,3:34:99:148,0,860	1/1:0,0:2:3.11:9,3,0	0/1:26,5:31:83.14:83,0,750	./.	0/1:23,1:23:83.35:83,0,511	0/0:34,1:34:26.50:0,26,1063	0/1:22,0:20:1.90:2,0,433	./.	0/1:23,2:23:49.56:50,0,696	0/1:29,1:27:33.46:33,0,712	0/0:20,0:19:45.15:0,45,644	1/1:9,8:15:28.64:402,29,0	0/1:37,6:36:55.30:55,0,892	0/0:20,0:19:3.19:0,3,501	0/1:31,3:33:21.45:21,0,855	0/1:32,0:29:42.91:43,0,771	0/0:29,2:27:8.53:0,9,804	0/1:14,0:14:1.90:2,0,437
chr10	88657904	.	A	ATG	1475.79	PASS	AB=0.899;AC=19;AF=0.380;AN=50;BaseQRankSum=11.069;DP=693;FS=33.307;HRun=0;HaplotypeScore=171.5429;InbreedingCoeff=-0.2701;MQ=59.97;MQ0=11;MQRankSum=-11.113;QD=3.07;ReadPosRankSum=0.617;VQSLOD=1.4609;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,1:15:39.09:0,39,530	0/1:17,2:17:26.14:26,0,315	0/0:32,0:29:81.05:0,81,1053	0/0:39,0:35:87.23:0,87,1218	0/1:13,6:11:1.32:222,0,1	./.	1/1:3,0:3:3.01:37,3,0	0/0:30,8:30:77.64:0,78,995	0/0:18,1:19:36.09:0,36,488	0/1:39,10:39:99:253,0,955	0/1:34,7:37:99:179,0,892	0/0:2,0:2:5.36:0,5,22	0/1:30,2:31:64.19:64,0,773	./.	0/1:21,2:22:99:99,0,525	0/0:32,2:33:44.43:0,44,1109	0/1:20,1:19:19.85:20,0,428	./.	0/1:28,1:26:53.57:54,0,750	0/1:28,3:27:27.48:27,0,759	0/0:20,0:19:45.15:0,45,662	1/1:19,8:15:18.92:437,19,0	0/1:42,6:39:68.18:68,0,957	0/1:19,1:19:16.71:17,0,487	0/1:34,1:34:18.45:18,0,917	0/1:29,5:28:79.46:79,0,833	0/1:30,3:30:11.34:11,0,815	0/1:12,2:14:19.83:20,0,450
chr10	88658156	.	C	CT	676.90	PASS	AB=0.900;AC=13;AF=0.260;AN=50;BaseQRankSum=13.385;DP=746;FS=38.572;HRun=0;HaplotypeScore=191.9915;InbreedingCoeff=0.3461;MQ=58.48;MQ0=41;MQRankSum=-13.055;QD=2.43;ReadPosRankSum=-0.502;VQSLOD=1.5664;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:30.95:0,31,709	0/1:27,2:20:13.31:13,0,331	0/0:43,0:30:80.52:0,81,1094	0/0:34,0:24:69.21:0,69,940	1/1:12,8:11:11.56:111,12,0	./.	1/1:7,0:5:2.95:21,3,0	0/0:30,0:29:78.10:0,78,994	0/0:19,0:19:30.65:0,31,591	0/1:35,5:30:36:36,0,734	0/0:51,3:28:12.87:0,13,552	1/1:0,1:1:3.01:43,3,0	0/0:22,0:22:27.82:0,28,712	./.	0/0:23,0:22:53.91:0,54,803	0/0:22,0:19:31.71:0,32,554	0/0:30,0:30:26.29:0,26,890	./.	0/0:29,1:27:15.42:0,15,665	0/1:53,9:41:99:150,0,523	0/0:26,0:25:42.37:0,42,727	1/1:7,10:9:15.05:218,15,0	0/1:40,6:35:80.33:80,0,499	0/0:25,0:25:36.74:0,37,808	0/1:52,5:37:99:159,0,571	0/0:27,2:26:2.43:0,2,809	0/0:29,1:29:21.01:0,21,769	0/0:24,0:21:48.76:0,49,726
chr10	88658157	.	C	CA	625.42	PASS	AB=0.970;AC=12;AF=0.240;AN=50;BaseQRankSum=13.399;DP=757;FS=38.568;HRun=0;HaplotypeScore=196.5362;InbreedingCoeff=0.2772;MQ=59.12;MQ0=40;MQRankSum=-12.938;QD=2.11;ReadPosRankSum=-0.540;VQSLOD=1.0194;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:32.04:0,32,729	0/1:30,0:21:13.31:13,0,333	0/0:43,0:31:83.84:0,84,1123	0/0:35,0:24:69.20:0,69,940	1/1:20,1:12:11.81:112,12,0	./.	0/1:6,0:4:13.98:15,0,14	0/0:29,0:28:78.10:0,78,998	0/0:20,0:20:27.87:0,28,588	0/0:41,0:31:10.54:0,11,760	0/1:53,3:29:25.54:26,0,517	1/1:1,0:1:3:25,3,0	0/0:23,0:23:48.29:0,48,710	./.	0/0:23,0:22:52.05:0,52,805	0/0:23,0:20:32.81:0,33,580	0/0:30,0:30:29.28:0,29,912	./.	0/0:30,0:27:17.62:0,18,648	0/1:57,6:41:99:275,0,544	0/0:27,0:26:43.76:0,44,748	1/1:17,0:9:14.99:127,15,0	0/1:44,2:35:85.21:85,0,494	0/0:26,0:26:31.07:0,31,798	0/1:57,0:37:99:101,0,570	0/0:30,0:27:34.22:0,34,859	0/0:30,0:30:11.79:0,12,758	0/0:24,0:21:46.96:0,47,726
chr10	88658158	.	C	CT	2437.95	PASS	AB=0.829;AC=23;AF=0.460;AN=50;BaseQRankSum=10.514;DP=764;FS=38.150;HRun=0;HaplotypeScore=184.0227;InbreedingCoeff=-0.4019;MQ=58.79;MQ0=38;MQRankSum=-12.711;QD=4.00;ReadPosRankSum=-1.304;VQSLOD=1.4056;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,5:24:79.66:80,0,668	0/1:21,10:22:99:123,0,340	0/0:43,0:31:83.37:0,83,1103	0/0:35,0:24:69.20:0,69,937	1/1:18,2:12:11.90:132,12,0	./.	0/1:6,0:4:8.98:20,0,9	0/0:28,0:27:71.83:0,72,911	0/1:16,4:20:40.32:40,0,558	0/1:34,8:32:99:133,0,682	0/1:39,18:31:99:101,0,527	1/1:1,0:1:3.01:43,3,0	0/0:20,2:22:12.69:0,13,666	./.	0/0:23,1:23:16.54:0,17,767	0/1:15,6:18:47.36:47,0,466	0/1:25,5:30:99:169,0,875	./.	0/1:24,7:28:99:153,0,621	0/1:52,11:42:99:194,0,532	0/1:21,6:26:99:122,0,683	1/1:15,2:9:14.41:179,14,0	0/1:38,8:35:99:208,0,443	0/1:22,5:27:99:100,0,764	0/1:37,19:37:99:398,0,555	0/1:26,4:27:92.06:92,0,799	0/1:26,7:33:99:223,0,737	0/1:17,6:20:38.40:38,0,652
chr10	88658333	.	C	CTG	5782.50	PASS	AB=0.690;AC=30;AF=0.536;AN=56;BaseQRankSum=12.340;DP=1052;FS=301.609;HRun=0;HaplotypeScore=193.1372;InbreedingCoeff=-0.1704;MQ=62.00;MQ0=77;MQRankSum=-14.451;QD=6.57;ReadPosRankSum=5.036;VQSLOD=0.0475;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,5:39:40.38:0,40,1204	0/1:9,12:17:99:196,0,193	0/0:40,0:39:83.01:0,83,1074	0/0:36,0:36:88.40:0,88,1175	1/1:15,14:15:14.97:221,15,0	1/1:8,23:10:18.06:284,18,0	1/1:3,17:11:18.06:332,18,0	0/0:26,1:25:69.19:0,69,965	0/1:20,27:34:99:322,0,609	0/1:43,47:61:99:574,0,1070	0/1:23,17:27:99:222,0,552	1/1:9,24:15:24.08:417,24,0	0/1:25,35:35:99:315,0,650	1/1:3,18:8:15:242,15,0	0/1:34,32:47:99:251,0,879	0/1:24,41:34:99:325,0,578	0/1:20,13:27:99:163,0,616	1/1:4,2:3:6.02:95,6,0	0/1:20,5:21:75.87:76,0,648	0/1:24,16:26:99:275,0,535	0/0:27,0:26:51.17:0,51,742	1/1:12,9:13:15.05:249,15,0	0/1:25,21:32:99:374,0,627	0/1:20,7:23:99:103,0,681	0/1:16,14:26:99:231,0,447	0/1:31,20:32:99:299,0,959	0/1:21,30:29:99:163,0,643	0/1:16,10:22:57.64:58,0,651
chr10	88658356	.	G	GTGGA	19089.26	PASS	AB=0.780;AC=21;AF=0.375;AN=56;BaseQRankSum=-15.362;DP=1196;FS=298.252;HRun=0;HaplotypeScore=212.9728;InbreedingCoeff=-0.3138;MQ=63.00;MQ0=119;MQRankSum=-2.752;QD=21.23;ReadPosRankSum=5.918;VQSLOD=0.2081;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,24:33:83.73:1504,0,84	0/1:18,4:16:99:172,0,130	0/0:37,0:37:99:0,99,1781	0/0:43,0:43:99:0,120,2033	0/0:31,0:18:18.06:0,18,325	0/0:30,0:7:9.03:0,9,148	0/0:30,0:14:12:0,12,174	1/1:12,16:22:54.19:1396,54,0	0/1:37,13:37:99:1014,0,168	0/1:69,19:62:99:1658,0,804	0/1:36,16:36:99:1060,0,272	0/0:49,0:30:36.12:0,36,667	0/1:51,16:38:99:1078,0,586	0/0:33,0:12:12.04:0,12,224	0/1:55,23:48:99:1255,0,316	0/1:53,12:34:99:814,0,435	0/1:24,18:35:99:1168,0,307	0/0:13,0:7:9.03:0,9,168	0/1:26,5:21:90.86:379,0,91	0/1:40,13:38:99:881,0,493	1/1:8,23:28:44.85:1130,45,0	0/0:31,0:19:27.09:0,27,503	0/1:35,16:34:99:1055,0,378	0/1:20,12:26:75.72:764,0,76	0/1:36,6:36:99:612,0,287	0/1:39,16:39:99:1745,0,447	0/1:38,11:25:99:794,0,125	0/1:13,8:18:81.78:609,0,82
chr10	88658795	.	CTTAT	C	7893.50	PASS	AB=0.748;AC=8;AF=0.143;AN=56;BaseQRankSum=-6.864;DP=1474;FS=3.493;HRun=0;HaplotypeScore=289.4579;InbreedingCoeff=-0.1695;MQ=38.36;MQ0=110;MQRankSum=-3.151;QD=15.54;ReadPosRankSum=5.002;VQSLOD=3.6869;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:49:87.14:0,87,2122	0/0:43,0:32:66.23:0,66,1870	0/0:32,0:13:39.13:0,39,1131	0/0:33,0:14:42.12:0,42,1060	0/0:62,0:52:99:0,105,2940	0/0:48,0:39:78.25:0,78,2193	0/0:29,0:18:50.96:0,51,1205	0/0:40,0:27:60.15:0,60,1504	0/0:45,0:30:54.15:0,54,1466	0/0:83,0:66:99:0,160,4576	0/0:76,0:54:99:0,108,3012	0/0:61,0:41:99:0,102,2864	0/1:39,28:54:99:1312,0,1554	0/0:69,0:54:99:0,102,2721	0/1:56,33:62:99:1375,0,1587	0/1:37,27:47:99:1328,0,1205	0/0:56,0:50:93.26:0,93,2593	0/0:23,0:18:30.10:0,30,820	0/1:26,12:25:99:491,0,717	0/1:50,23:56:99:999,0,1928	0/0:12,0:11:24.08:0,24,695	0/0:69,0:55:99:0,111,3131	0/1:39,15:38:99:780,0,1040	0/1:31,13:33:99:624,0,722	0/0:62,0:40:66.18:0,66,1808	0/0:48,0:29:75.26:0,75,2066	0/1:56,23:63:99:985,0,2233	0/0:13,0:5:9:0,9,195
chr10	88658965	.	CA	C	1847.70	PASS	AB=0.768;AC=7;AF=0.125;AN=56;BaseQRankSum=7.434;DP=1798;FS=2.689;HRun=2;HaplotypeScore=354.7334;InbreedingCoeff=-0.1429;MQ=43.12;MQ0=95;MQRankSum=-2.611;QD=4.45;ReadPosRankSum=-0.862;VQSLOD=-0.4194;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:51:99:0,108,1585	0/0:36,0:32:84.23:0,84,1214	0/0:43,0:13:34.27:0,34,395	0/0:40,0:17:45.09:0,45,553	0/1:49,14:51:99:161,0,1142	0/1:35,24:51:99:391,0,947	0/1:44,12:42:99:134,0,1077	0/0:128,2:81:99:0,217,3191	0/0:50,0:41:84.28:0,84,1257	0/0:80,0:68:99:0,172,2513	0/0:88,1:72:99:0,163,2386	0/1:34,32:52:99:499,0,999	0/0:77,0:71:99:0,193,2835	0/1:45,21:56:99:220,0,1374	0/0:78,0:68:99:0,193,2845	0/0:69,0:60:99:0,169,2456	0/0:51,0:50:99:0,132,1934	0/1:28,11:39:99:302,0,717	0/0:68,0:37:90.30:0,90,1341	0/0:115,0:97:99:0,229,3363	0/0:35,0:34:42.14:0,42,629	0/1:51,15:52:99:272,0,1174	0/0:92,0:75:99:0,166,2433	0/0:52,0:46:99:0,102,1517	0/0:71,1:56:99:0,105,1547	0/0:47,0:37:96.32:0,96,1424	0/0:80,0:66:99:0,175,2577	0/0:19,0:18:36.12:0,36,540
chr10	88659135	.	TG	T	1014.06	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.131;DP=1399;FS=17.041;HRun=1;HaplotypeScore=263.6760;InbreedingCoeff=0.9999;MQ=66.94;MQ0=27;MQRankSum=0.427;QD=24.14;ReadPosRankSum=0.981;VQSLOD=-0.1519;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:48:99:0,141,1999	0/0:27,0:26:72.21:0,72,1053	0/0:39,1:38:97.55:0,98,1414	0/0:52,0:48:99:0,107,1654	0/0:56,0:54:99:0,150,2137	0/0:60,0:53:99:0,129,1900	0/0:47,0:38:99:0,108,1560	0/0:40,0:31:93.27:0,93,1328	0/0:31,0:29:78.22:0,78,1119	0/0:91,0:81:99:0,220,3247	0/0:63,0:58:99:0,141,2105	0/0:53,0:46:99:0,111,1649	0/0:56,0:53:99:0,141,2066	0/0:58,0:53:99:0,132,1938	0/0:61,0:56:99:0,153,2223	0/0:55,0:51:99:0,129,1909	0/0:51,0:50:99:0,144,2162	0/0:25,0:23:66.17:0,66,944	0/0:42,0:38:99:0,108,1543	0/0:71,0:65:99:0,184,2706	0/0:25,0:24:66.21:0,66,982	0/0:62,0:59:99:0,165,2384	0/0:58,0:52:99:0,135,1957	0/0:47,0:44:99:0,120,1817	1/1:2,40:38:81.23:1109,81,0	0/0:44,0:36:93.32:0,93,1414	0/0:79,0:72:99:0,199,2949	0/0:13,0:13:36.09:0,36,506
chr10	88659718	.	C	CTA	5221.72	PASS	AB=0.923;AC=49;AF=0.907;AN=54;BaseQRankSum=8.733;DP=538;FS=3.900;HRun=0;HaplotypeScore=175.8835;InbreedingCoeff=0.6095;MQ=67.12;MQ0=1;MQRankSum=-5.326;QD=10.44;ReadPosRankSum=7.816;VQSLOD=4.1602;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:2:3:25,3,0	1/1:5,0:4:10.92:58,11,0	0/0:22,0:21:60.16:0,60,868	0/0:16,0:16:8.03:0,8,583	1/1:35,0:29:18.41:306,18,0	1/1:24,4:28:38.76:160,39,0	1/1:17,2:19:30.42:134,30,0	1/1:11,4:5:11.95:156,12,0	1/1:2,4:6:9.01:140,9,0	0/1:22,2:24:27.59:221,0,28	1/1:24,0:18:44.02:278,44,0	1/1:23,3:26:51.57:302,52,0	1/1:19,1:19:34.82:213,35,0	1/1:30,4:34:66.45:371,66,0	1/1:19,4:23:49.81:319,50,0	1/1:28,2:30:33.40:262,33,0	1/1:23,0:22:37.07:179,37,0	1/1:10,0:10:27.44:151,27,0	1/1:22,2:22:21.38:226,21,0	1/1:31,0:20:55.24:353,55,0	./.	1/1:18,0:14:35.87:219,36,0	1/1:27,0:22:54.82:360,55,0	1/1:18,0:18:39.50:187,39,0	1/1:11,0:4:5.37:33,5,0	1/1:9,1:10:16.73:115,17,0	1/1:23,5:28:53.84:307,54,0	1/1:8,0:6:17.97:146,18,0
chr10	88659719	.	C	CAT	20218.78	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=2.873;DP=567;FS=4.343;HRun=0;HaplotypeScore=124.4100;InbreedingCoeff=0.8200;MQ=65.81;MQ0=1;MQRankSum=-5.892;QD=38.22;ReadPosRankSum=6.492;VQSLOD=6.8055;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,1:2:3.01:61,3,0	1/1:3,4:7:21.07:390,21,0	0/0:22,0:21:60.20:0,60,943	0/0:15,0:16:11.80:0,12,610	1/1:3,24:32:63.22:1244,63,0	1/1:5,23:29:45.15:914,45,0	1/1:4,15:20:39.13:783,39,0	1/1:18,0:9:18.06:289,18,0	1/1:5,1:6:9.03:176,9,0	1/1:5,13:23:63.21:1135,63,0	1/1:0,14:16:48.16:939,48,0	1/1:6,23:29:60.21:1212,60,0	1/1:2,19:21:39.13:789,39,0	1/1:6,30:36:75.26:1518,75,0	1/1:5,18:23:54.19:1089,54,0	1/1:3,25:29:66.23:1335,66,0	1/1:1,22:22:42.14:853,42,0	1/1:1,10:11:30.10:609,30,0	1/1:7,18:21:27.76:1157,28,0	1/1:4,17:21:57.20:1104,57,0	./.	1/1:0,12:14:39.13:749,39,0	1/1:0,20:22:57.09:1138,57,0	1/1:0,18:19:45.15:914,45,0	1/1:1,6:6:6.02:104,6,0	1/1:5,4:13:18.06:308,18,0	1/1:6,23:29:57.20:1154,57,0	1/1:0,0:6:18.06:256,18,0
chr10	88660166	.	C	CCT	2496.91	PASS	AB=0.865;AC=31;AF=0.574;AN=54;BaseQRankSum=0.965;DP=882;FS=26.890;HRun=0;HaplotypeScore=112.2128;InbreedingCoeff=-0.2801;MQ=49.65;MQ0=141;MQRankSum=-5.113;QD=3.32;ReadPosRankSum=5.905;VQSLOD=-0.0346;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,7:18:42.92:188,0,43	0/1:8,1:5:25.71:67,0,26	0/0:49,0:40:99:0,120,1715	0/0:56,0:49:99:0,132,1925	1/1:13,4:8:6:76,6,0	0/1:33,6:18:13.60:187,0,14	0/1:10,5:4:3.19:98,0,3	0/0:18,1:8:8.99:0,9,84	0/1:38,6:20:51.42:51,0,89	0/1:45,7:19:34.66:45,0,35	0/1:16,6:11:5.70:124,0,6	1/1:14,8:7:9.03:159,9,0	0/1:51,5:27:71.71:134,0,72	0/1:24,5:16:54.33:106,0,54	0/1:53,9:25:79.31:150,0,79	0/1:29,4:14:6.22:6,0,50	0/1:19,8:12:7.47:94,0,7	1/1:4,4:5:9.01:135,9,0	0/1:24,0:11:53.57:77,0,54	1/1:23,5:8:12:133,12,0	0/1:15,1:11:15.27:15,0,30	1/1:19,6:13:15.02:207,15,0	1/1:11,7:9:12.04:212,12,0	0/1:24,1:17:47.46:58,0,47	1/1:19,2:7:6:57,6,0	0/1:41,6:21:99:155,0,141	0/1:55,5:32:99:129,0,101	./.
chr10	88660171	.	G	GT	6141.05	PASS	AB=0.552;AC=49;AF=0.907;AN=54;BaseQRankSum=12.009;DP=751;FS=21.483;HRun=1;HaplotypeScore=87.7079;InbreedingCoeff=0.5728;MQ=56.06;MQ0=83;MQRankSum=-11.300;QD=9.49;ReadPosRankSum=8.110;VQSLOD=0.4464;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:17:24.07:323,24,0	1/1:1,5:5:12.04:174,12,0	0/0:43,0:43:99:0,123,1618	0/0:58,0:56:99:0,162,2203	1/1:2,8:7:6.02:85,6,0	1/1:0,24:13:24.08:340,24,0	1/1:0,6:4:9.03:123,9,0	1/1:3,3:6:2.78:27,3,0	1/1:1,25:16:30.10:428,30,0	1/1:4,25:16:15.02:202,15,0	1/1:1,11:11:15.05:215,15,0	1/1:0,11:5:9.03:115,9,0	1/1:2,33:25:42.01:606,42,0	1/1:2,18:14:27.09:389,27,0	1/1:3,35:21:36.12:506,36,0	1/1:1,23:11:21.07:314,21,0	1/1:1,11:10:6.02:85,6,0	1/1:1,3:6:8.95:116,9,0	0/1:0,9:7:5.63:77,0,6	1/1:2,15:9:12.04:176,12,0	1/1:2,9:11:15.05:224,15,0	1/1:1,9:9:15.05:209,15,0	1/1:0,6:7:12.04:160,12,0	1/1:0,16:16:14.79:203,15,0	1/1:3,12:8:6.02:90,6,0	1/1:1,29:20:42.13:579,42,0	1/1:1,30:18:27.07:377,27,0	./.
chr10	88660836	.	CA	C	2091.69	PASS	AB=0.689;AC=19;AF=0.475;AN=40;BaseQRankSum=-5.276;DP=905;FS=0.000;HRun=2;HaplotypeScore=70.6524;InbreedingCoeff=-0.1979;MQ=13.82;MQ0=507;MQRankSum=-0.996;QD=3.48;ReadPosRankSum=0.255;VQSLOD=0.0003;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,10:8:5.92:0,6,39	0/0:12,4:3:6.02:0,6,89	./.	./.	1/1:13,7:4:3.01:38,3,0	0/1:15,12:10:23.25:136,0,23	1/1:15,28:16:15.05:193,15,0	./.	0/0:33,6:10:17.87:0,18,140	0/1:21,13:14:80.42:80,0,339	0/1:10,5:1:0:0,0,0	0/1:20,25:14:73.83:218,0,74	0/1:25,37:18:91.69:237,0,92	0/1:17,22:17:20.06:188,0,20	0/1:41,36:26:99:266,0,126	0/1:33,26:18:32.56:314,0,33	0/1:14,17:7:2.94:139,0,3	1/1:4,6:1:3.01:39,3,0	./.	./.	./.	0/0:11,1:1:3.01:0,3,35	0/0:16,6:2:2.97:0,3,20	1/1:18,24:5:6.02:77,6,0	./.	0/1:24,8:8:62.21:62,0,106	0/1:36,27:25:99:231,0,133	./.
chr10	88668764	.	GGA	G	64.59	PASS	AB=0.861;AC=4;AF=0.077;AN=52;BaseQRankSum=4.008;DP=476;FS=22.559;HRun=0;HaplotypeScore=80.6191;InbreedingCoeff=0.2040;MQ=45.69;MQ0=64;MQRankSum=-2.041;QD=1.50;ReadPosRankSum=0.845;VQSLOD=0.1466;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:84.25:0,84,1660	0/0:11,0:7:12.04:0,12,242	0/0:18,0:10:20.77:0,21,453	0/0:13,0:10:24.05:0,24,391	0/0:8,0:4:6.02:0,6,116	0/0:10,0:5:9.03:0,9,171	0/0:19,0:12:21.07:0,21,402	0/0:38,1:30:84.25:0,84,1639	0/0:18,0:9:21.07:0,21,418	0/0:27,1:21:57.19:0,57,1126	0/0:17,0:12:21.07:0,21,425	0/0:10,0:2:2.97:0,3,20	0/1:8,2:3:49.82:54,0,50	./.	0/0:7,0:5:6.02:0,6,98	0/1:14,2:10:51.31:51,0,101	0/0:28,0:21:51.18:0,51,1033	0/0:5,0:3:3.01:0,3,59	0/0:12,1:7:12.04:0,12,234	0/0:16,0:7:15.05:0,15,285	0/0:29,0:22:63.22:0,63,1260	./.	0/0:6,0:3:6.02:0,6,118	0/0:9,0:4:6.02:0,6,118	0/0:23,0:16:45.15:0,45,887	0/0:27,0:23:57.20:0,57,1150	1/1:15,2:4:6.01:62,6,0	0/0:20,0:18:39.13:0,39,789
chr10	88668926	.	G	GCCCA	2384.39	PASS	AC=42;AF=0.913;AN=46;BaseQRankSum=6.683;DP=208;FS=25.501;HRun=0;HaplotypeScore=56.7294;InbreedingCoeff=0.4073;MQ=55.33;MQ0=11;MQRankSum=-7.360;QD=15.90;ReadPosRankSum=0.139;VQSLOD=1.3187;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,2:1:3.01:62,3,0	0/0:16,0:15:39.13:0,39,761	0/0:20,0:19:54.03:0,54,1078	1/1:5,4:6:8.80:183,9,0	1/1:2,3:4:12.04:240,12,0	1/1:3,2:2:2.96:19,3,0	1/1:4,0:1:3.01:60,3,0	1/1:6,1:2:3.01:53,3,0	1/1:10,7:11:21.05:377,21,0	./.	1/1:6,2:5:8.89:127,9,0	1/1:5,1:2:5.89:37,6,0	1/1:5,1:4:5.99:123,6,0	1/1:1,1:2:6.02:109,6,0	1/1:3,4:5:12.04:234,12,0	1/1:6,3:6:9.50:172,10,0	1/1:3,0:3:9:152,9,0	1/1:8,0:4:5.93:40,6,0	1/1:4,3:4:5.98:51,6,0	./.	1/1:8,3:7:4.83:48,5,0	./.	1/1:8,0:5:8.94:105,9,0	1/1:9,8:8:5.98:82,6,0	1/1:5,1:2:6.02:107,6,0	1/1:0,2:2:6.02:127,6,0	./.
chr10	88668929	.	C	CATGGCA	3385.67	PASS	AB=0.826;AC=32;AF=0.762;AN=42;BaseQRankSum=5.974;DP=184;FS=12.089;HRun=0;HaplotypeScore=47.3419;InbreedingCoeff=0.3813;MQ=57.96;MQ0=14;MQRankSum=-6.343;QD=29.70;ReadPosRankSum=2.434;VQSLOD=1.5726;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:6,0:3:5.99:106,6,0	0/0:15,0:14:39.13:0,39,947	0/0:22,0:20:42.58:0,43,1227	1/1:6,0:4:6.02:172,6,0	0/1:4,1:5:3.45:353,0,3	0/0:5,0:2:2.41:0,2,17	0/0:1,0:1:2.99:0,3,23	1/1:1,5:2:3.01:112,3,0	1/1:10,4:11:21.07:677,21,0	./.	0/1:7,2:6:5.20:205,0,5	1/1:5,0:1:3.01:59,3,0	1/1:4,2:4:6.49:172,6,0	1/1:2,0:2:6.02:156,6,0	1/1:6,1:5:12.04:309,12,0	1/1:4,2:3:5.64:197,6,0	1/1:4,0:4:9.03:248,9,0	1/1:8,0:2:3.01:40,3,0	./.	./.	./.	./.	1/1:6,0:4:6.02:135,6,0	1/1:13,4:7:3.01:85,3,0	1/1:1,3:2:6.02:190,6,0	1/1:2,0:2:6.02:170,6,0	./.
chr10	88669112	.	AG	A	2987.57	PASS	AB=0.789;AC=30;AF=0.577;AN=52;BaseQRankSum=2.713;DP=597;FS=0.000;HRun=2;HaplotypeScore=48.7383;InbreedingCoeff=0.0554;MQ=35.34;MQ0=148;MQRankSum=-1.585;QD=6.84;ReadPosRankSum=0.712;VQSLOD=0.6609;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/1:10,3:8:35.85:69,0,36	0/0:10,0:3:9.03:0,9,135	0/0:22,0:5:5.59:0,6,89	1/1:11,5:4:3.01:39,3,0	1/1:13,9:7:21.07:272,21,0	1/1:13,13:13:12.04:156,12,0	0/0:15,0:2:6.02:0,6,90	0/0:19,0:4:6.02:0,6,90	0/1:18,2:8:23.87:24,0,164	0/1:13,2:7:26.92:27,0,122	1/1:23,19:16:30.09:389,30,0	1/1:8,12:6:18.06:233,18,0	1/1:17,16:20:32.70:427,33,0	0/1:11,9:11:68.18:173,0,68	0/1:8,13:13:59.67:281,0,60	1/1:20,18:26:36.12:467,36,0	1/1:14,5:7:12.04:156,12,0	0/1:18,5:7:99:134,0,114	1/1:12,2:3:6.02:78,6,0	0/0:46,0:15:8.98:0,9,110	1/1:9,1:2:3.01:39,3,0	0/1:9,8:8:33.15:33,0,36	0/1:17,4:12:29.86:30,0,81	0/1:23,8:11:26.84:27,0,123	./.	0/1:13,3:9:11.85:105,0,12	0/0:17,0:9:6.02:0,6,89
chr10	88669289	.	C	CTGTACTAA	3201.15	PASS	AC=22;AF=0.846;AN=26;BaseQRankSum=6.462;DP=114;FS=74.821;HRun=0;HaplotypeScore=54.6250;InbreedingCoeff=0.5701;MQ=75.23;MQ0=4;MQRankSum=-6.335;QD=62.77;ReadPosRankSum=2.070;VQSLOD=0.7793;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:20,0:17:48.16:0,48,1329	0/0:23,0:19:45.15:0,45,1211	./.	1/1:1,2:2:6.02:203,6,0	1/1:3,8:8:21.07:804,21,0	./.	./.	./.	./.	1/1:1,2:2:6.02:266,6,0	1/1:4,4:6:15.05:383,15,0	1/1:3,2:4:9.03:305,9,0	./.	./.	1/1:2,0:5:15.05:509,15,0	1/1:1,1:2:6.02:268,6,0	1/1:2,1:2:3.01:134,3,0	1/1:0,1:1:3.01:134,3,0	./.	./.	./.	1/1:1,2:3:6.02:267,6,0	./.	./.	1/1:1,0:1:3.01:38,3,0	./.
chr10	88670065	.	C	CT	16471.18	PASS	AB=0.660;AC=46;AF=0.821;AN=56;BaseQRankSum=-3.529;DP=924;FS=1.192;HRun=1;HaplotypeScore=47.8088;InbreedingCoeff=0.1711;MQ=31.65;MQ0=291;MQRankSum=1.671;QD=18.91;ReadPosRankSum=2.131;VQSLOD=5.1547;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,29:41:99:692,0,263	1/1:0,5:2:6.02:90,6,0	0/0:25,0:2:3.01:0,3,37	0/0:28,0:3:9.01:0,9,87	1/1:4,34:18:21.07:293,21,0	1/1:2,39:30:60.16:837,60,0	1/1:5,37:27:69.19:1008,69,0	0/1:18,11:8:56.48:185,0,56	0/1:18,19:26:99:338,0,430	1/1:1,23:17:51.13:721,51,0	1/1:4,14:11:18.06:269,18,0	1/1:0,26:23:66.22:969,66,0	1/1:2,48:37:87.29:1294,87,0	1/1:0,34:23:57.19:825,57,0	1/1:4,34:25:69.23:1006,69,0	1/1:1,33:25:69.23:1017,69,0	1/1:1,14:8:15.05:225,15,0	1/1:3,29:26:60.20:899,60,0	1/1:4,26:18:51.14:698,51,0	1/1:5,35:23:36.09:515,36,0	0/1:15,24:31:99:563,0,237	1/1:5,19:18:45.04:601,45,0	1/1:3,32:20:27.09:403,27,0	1/1:1,38:34:72.24:1078,72,0	1/1:2,42:20:18.06:270,18,0	0/1:18,29:37:99:654,0,499	1/1:3,40:25:63.21:943,63,0	0/1:6,5:4:29.91:81,0,30
chr10	88671300	.	GAC	G	1931.40	PASS	AC=40;AF=0.870;AN=46;BaseQRankSum=4.342;DP=566;FS=14.794;HRun=0;HaplotypeScore=67.1680;InbreedingCoeff=0.3893;MQ=50.39;MQ0=107;MQRankSum=-5.573;QD=5.29;ReadPosRankSum=2.365;VQSLOD=1.1583;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,9:18:16.28:176,16,0	1/1:1,4:3:6.02:76,6,0	0/0:51,0:33:64.81:0,65,1176	0/0:54,0:44:73.61:0,74,1052	1/1:11,13:12:3.01:38,3,0	1/1:5,11:11:5.95:56,6,0	./.	1/1:22,17:22:51.11:574,51,0	1/1:18,12:12:9:88,9,0	1/1:7,4:3:3.01:38,3,0	1/1:0,4:3:6.02:76,6,0	1/1:1,4:2:3.01:38,3,0	./.	1/1:6,12:9:3.01:38,3,0	./.	./.	1/1:2,0:1:3.01:36,3,0	1/1:10,4:10:9.03:110,9,0	1/1:4,7:5:12.01:126,12,0	1/1:8,18:10:3.01:38,3,0	1/1:13,6:15:2.97:21,3,0	1/1:7,18:7:3.01:38,3,0	1/1:5,16:12:3.01:38,3,0	./.	0/0:8,13:13:0:0,0,0	1/1:28,11:15:15.01:151,15,0	1/1:4,7:9:6.02:76,6,0	1/1:8,5:11:21:220,21,0
chr10	88672363	.	TA	T	500.96	PASS	AB=0.720;AC=1;AF=0.018;AN=56;BaseQRankSum=3.216;DP=1608;FS=1.954;HRun=3;HaplotypeScore=263.6618;InbreedingCoeff=-0.0260;MQ=36.69;MQ0=167;MQRankSum=0.337;QD=9.28;ReadPosRankSum=0.378;VQSLOD=1.2165;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:112,0:102:99:0,247,3376	0/0:20,0:7:12.04:0,12,172	0/0:25,0:10:4.39:0,4,272	0/0:24,0:8:24.08:0,24,334	0/0:61,0:50:99:0,114,1500	0/0:47,0:38:96.28:0,96,1352	0/0:52,0:49:87.20:0,87,1183	0/0:133,0:73:99:0,189,2563	0/0:78,0:71:99:0,162,2190	0/0:35,0:18:33.11:0,33,472	0/0:34,0:12:15.05:0,15,215	0/0:63,0:55:99:0,135,1872	0/0:68,0:57:99:0,138,1914	0/0:60,0:51:99:0,123,1698	0/0:65,0:59:99:0,138,1960	0/0:59,0:52:99:0,132,1837	0/0:20,0:9:12.04:0,12,172	0/0:43,0:40:99:0,99,1425	0/0:67,0:31:66.21:0,66,950	0/0:82,0:62:99:0,150,2121	0/0:102,0:96:99:0,265,3727	0/0:46,0:34:93.11:0,93,1202	0/0:60,0:39:99:0,102,1392	0/0:24,0:23:51.05:0,51,665	0/1:33,21:37:99:575,0,460	0/0:79,0:72:99:0,205,2900	0/0:55,0:48:99:0,120,1674	0/0:39,0:31:75.25:0,75,1079
chr10	88672386	.	A	AG	6997.33	PASS	AB=0.779;AC=28;AF=0.500;AN=56;BaseQRankSum=9.873;DP=1426;FS=373.266;HRun=0;HaplotypeScore=247.0149;InbreedingCoeff=-0.4398;MQ=43.03;MQ0=54;MQRankSum=-19.143;QD=5.88;ReadPosRankSum=3.104;VQSLOD=-0.7041;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:94,15:99:40.02:40,0,2798	1/1:1,19:7:12.04:190,12,0	0/0:25,0:12:36.12:0,36,503	0/0:18,0:5:15.04:0,15,194	0/1:42,26:56:99:291,0,1328	0/1:27,8:33:99:186,0,826	0/1:22,16:34:99:434,0,667	0/0:92,4:92:99:0,133,3214	0/1:64,11:72:63.04:63,0,1984	1/1:6,17:13:36.12:571,36,0	1/1:7,23:10:21.01:332,21,0	0/1:30,21:48:99:696,0,699	0/1:39,14:50:99:292,0,1217	0/1:29,17:43:99:413,0,840	0/1:38,20:57:99:566,0,1151	0/1:38,8:43:99:162,0,1189	1/1:2,16:9:12.04:191,12,0	0/1:33,6:38:50.40:50,0,1040	0/1:27,15:38:99:355,0,774	0/1:34,38:59:99:754,0,1125	0/0:84,13:92:99:0,109,3194	0/1:34,20:38:99:133,0,1044	0/1:34,30:47:99:458,0,893	0/1:23,3:25:85.85:86,0,614	0/1:25,22:34:99:306,0,828	0/1:71,14:79:99:168,0,2444	0/1:35,6:39:85.51:86,0,1148	0/1:36,13:43:99:174,0,955
chr10	88673001	.	A	AT	809.07	PASS	AB=0.809;AC=11;AF=0.196;AN=56;BaseQRankSum=13.502;DP=1193;FS=45.282;HRun=0;HaplotypeScore=284.3171;InbreedingCoeff=-0.2607;MQ=34.47;MQ0=80;MQRankSum=-11.660;QD=1.48;ReadPosRankSum=3.883;VQSLOD=1.5592;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:42:64.97:0,65,876	0/1:18,8:14:74.51:75,0,133	0/0:19,0:5:15.05:0,15,210	0/0:16,0:3:9.03:0,9,124	0/1:24,20:22:71.70:96,0,72	0/0:43,1:35:42.09:0,42,714	0/0:29,1:25:41.86:0,42,449	0/1:52,0:41:80.58:81,0,595	0/0:31,1:28:8.77:0,9,660	0/1:55,6:26:62.94:63,0,374	0/1:34,14:19:65.89:66,0,234	0/0:52,0:45:63.20:0,63,1050	0/0:62,0:51:98.93:0,99,1236	0/0:50,0:45:81.05:0,81,1361	0/0:58,0:51:99:0,117,1504	0/0:49,0:41:95.93:0,96,1222	0/0:29,0:25:3.40:0,3,590	0/0:23,0:17:42.10:0,42,561	0/0:33,0:21:60.19:0,60,820	0/1:38,11:19:50.93:51,0,245	0/0:19,0:15:21.07:0,21,292	0/1:45,21:31:74.84:75,0,381	0/1:28,19:18:88.19:88,0,168	0/0:20,0:18:47.99:0,48,635	0/1:53,9:22:64.22:64,0,248	0/1:46,5:37:43.98:44,0,884	0/0:63,0:48:99:0,99,1306	0/1:23,18:31:99:255,0,258
chr10	88673014	.	GA	G	724.27	PASS	AB=0.884;AC=7;AF=0.125;AN=56;BaseQRankSum=9.665;DP=1231;FS=78.754;HRun=1;HaplotypeScore=313.9797;InbreedingCoeff=-0.1443;MQ=34.41;MQ0=85;MQRankSum=-6.315;QD=2.09;ReadPosRankSum=2.119;VQSLOD=-0.4334;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:41:63.16:0,63,963	0/1:22,3:12:98.14:98,0,239	0/0:27,0:6:18.06:0,18,288	0/0:20,0:8:9.83:0,10,214	0/1:47,5:27:34.03:34,0,424	0/0:53,0:38:75.06:0,75,1084	0/0:24,0:19:36.04:0,36,521	0/0:75,0:69:99:0,126,1882	0/0:29,0:25:66.23:0,66,1050	0/0:67,0:27:51.09:0,51,748	0/1:46,4:18:38.55:39,0,447	0/0:44,0:36:81.28:0,81,1278	0/0:56,0:45:78.14:0,78,1087	0/0:47,0:42:99:0,105,1547	0/0:62,0:52:99:0,108,1671	0/0:46,0:36:78.07:0,78,1107	0/0:29,0:22:45.15:0,45,695	0/0:22,0:15:36.12:0,36,573	0/0:31,1:20:54.18:0,54,856	0/1:54,7:29:99:116,0,529	0/0:20,0:16:24:0,24,351	0/0:59,0:27:57.06:0,57,833	0/1:42,9:18:99:143,0,298	0/0:18,0:15:29.89:0,30,475	0/1:66,3:26:4.35:4,0,662	0/0:46,2:35:5.62:0,6,1190	0/0:60,0:42:90.27:0,90,1365	0/1:26,13:32:99:417,0,583
chr10	88673029	.	GA	G	1301.47	PASS	AB=0.860;AC=9;AF=0.161;AN=56;BaseQRankSum=9.986;DP=1208;FS=99.742;HRun=1;HaplotypeScore=308.8861;InbreedingCoeff=-0.1805;MQ=34.76;MQ0=86;MQRankSum=-6.981;QD=2.91;ReadPosRankSum=-1.686;VQSLOD=0.1571;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:42:69.19:0,69,1098	0/1:19,5:11:74.74:188,0,75	0/0:31,0:12:36.12:0,36,562	0/0:33,0:22:61.67:0,62,899	0/1:46,12:27:88.23:88,0,392	0/0:47,0:31:57.15:0,57,877	0/0:29,0:22:36.10:0,36,548	0/0:82,0:72:99:0,135,2081	0/0:31,1:27:69.24:0,69,1099	0/0:65,0:27:60.17:0,60,916	0/1:46,7:18:99:130,0,338	0/0:38,0:31:60.20:0,60,954	0/0:44,0:32:45.15:0,45,716	0/0:36,0:32:78.27:0,78,1237	0/0:58,0:48:99:0,99,1572	0/0:38,0:28:54.14:0,54,829	0/0:37,0:27:57.62:0,58,889	0/0:22,0:14:33.11:0,33,506	0/0:40,0:28:66.22:0,66,1021	0/1:48,13:27:99:235,0,516	0/0:19,0:14:21.07:0,21,334	0/1:48,2:19:38.53:39,0,573	0/1:37,9:14:91.48:91,0,350	0/0:14,0:10:14.85:0,15,234	0/1:61,8:24:99:157,0,520	0/1:45,2:33:0.42:0,0,1128	0/0:48,0:32:60.20:0,60,955	0/1:25,15:29:99:508,0,407
chr10	88673043	.	T	TC	1155.71	PASS	AB=0.876;AC=7;AF=0.125;AN=56;BaseQRankSum=10.069;DP=1201;FS=58.876;HRun=0;HaplotypeScore=345.5802;InbreedingCoeff=-0.1462;MQ=34.59;MQ0=75;MQRankSum=-6.877;QD=3.36;ReadPosRankSum=-4.839;VQSLOD=0.7986;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,1:46:60.30:0,60,749	0/1:20,5:12:23.86:221,0,24	0/0:31,0:19:57.19:0,57,788	0/0:34,0:22:60.19:0,60,776	0/0:44,3:20:12.43:0,12,144	0/0:39,0:26:49.35:0,49,580	0/0:25,0:18:32.85:0,33,330	0/0:79,0:67:99:0,117,1612	0/0:32,0:27:63.05:0,63,784	0/0:56,1:22:22.25:0,22,602	0/1:55,2:23:27.61:105,0,28	0/0:44,0:38:29.58:0,30,450	0/0:39,0:27:36.02:0,36,440	0/0:30,0:25:38.45:0,38,438	0/0:60,0:49:73.40:0,73,795	0/0:41,0:33:38.74:0,39,336	0/0:46,8:45:65.18:0,65,734	0/0:26,0:16:33.08:0,33,451	0/0:34,0:25:39.89:0,40,730	0/1:51,12:30:99:286,0,365	0/0:20,3:19:23.78:0,24,290	0/0:41,0:15:9.03:0,9,126	0/1:42,5:14:29.87:30,0,192	0/0:21,0:14:12.24:0,12,170	0/1:59,7:25:99:145,0,257	0/1:44,2:30:17.06:17,0,927	0/0:46,0:29:34.25:0,34,537	0/1:26,12:27:99:482,0,330
chr10	88673049	.	G	GTC	4682.47	PASS	AB=0.976;AC=32;AF=0.571;AN=56;BaseQRankSum=0.508;DP=1144;FS=48.867;HRun=0;HaplotypeScore=337.4906;InbreedingCoeff=-0.1805;MQ=35.39;MQ0=58;MQRankSum=-1.683;QD=4.52;ReadPosRankSum=4.838;VQSLOD=2.7086;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:55,0:46:14.62:15,0,164	0/1:22,1:11:53.94:76,0,54	0/0:27,0:19:54.18:0,54,760	0/0:29,0:22:48.16:0,48,674	0/1:48,1:20:27.31:64,0,27	1/1:33,7:26:29.98:506,30,0	1/1:25,1:17:14.99:166,15,0	0/1:70,0:57:99:348,0,538	0/0:31,0:26:40.20:0,40,477	0/1:45,1:20:97.99:236,0,98	0/1:59,1:26:15.03:15,0,73	1/1:36,3:35:13.02:286,13,0	1/1:37,1:27:21.01:263,21,0	0/1:32,4:30:76.16:293,0,76	0/1:55,4:48:6.85:345,0,7	0/1:40,0:33:75.17:81,0,75	0/1:56,1:48:73.25:93,0,73	0/1:24,0:14:29.32:211,0,29	1/1:26,4:21:7.07:370,7,0	0/1:61,1:27:38.78:245,0,39	0/0:20,0:16:11.96:0,12,147	1/1:38,0:16:8.89:59,9,0	0/1:47,0:15:47.74:105,0,48	1/1:19,2:14:14.90:128,15,0	1/1:59,0:24:19.84:190,20,0	0/1:42,1:29:99:193,0,473	0/1:36,3:23:49.71:305,0,50	0/1:36,0:26:87.46:87,0,126
chr10	88673051	.	CTG	C	7144.96	PASS	AB=0.691;AC=32;AF=0.571;AN=56;BaseQRankSum=-1.569;DP=1098;FS=54.348;HRun=0;HaplotypeScore=315.4479;InbreedingCoeff=-0.2741;MQ=35.77;MQ0=55;MQRankSum=-1.299;QD=6.97;ReadPosRankSum=5.813;VQSLOD=2.6345;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,25:46:55.65:335,0,56	0/1:12,12:12:49.62:50,0,60	0/0:27,0:19:54.18:0,54,903	0/0:28,0:21:48.16:0,48,858	0/1:32,17:21:10:125,0,10	1/1:17,19:24:16.44:578,16,0	1/1:11,14:17:15.05:225,15,0	0/1:28,21:40:99:515,0,375	0/1:17,10:24:99:139,0,242	0/1:16,20:16:33.66:408,0,34	0/1:39,17:26:32.28:32,0,65	0/1:14,21:34:3.49:361,0,3	1/1:11,24:26:21.07:302,21,0	0/1:16,19:30:71.27:328,0,71	0/1:18,38:45:21.61:554,0,22	0/1:15,25:34:74.58:201,0,75	0/1:33,12:43:56.30:160,0,56	0/1:16,7:15:0.04:267,0,0	1/1:16,13:18:7.42:555,7,0	0/1:25,35:26:3.57:365,0,4	0/0:14,2:15:11.93:0,12,113	1/1:19,19:16:9.03:134,9,0	0/1:25,22:16:25.83:163,0,26	1/1:11,10:14:15.05:223,15,0	1/1:31,26:26:9.10:296,9,0	0/1:28,10:27:99:317,0,354	0/1:17,22:23:99:422,0,106	0/1:27,11:28:90.08:90,0,100
chr10	88675912	.	ACCTT	A	95.87	PASS	AB=0.804;AC=2;AF=0.043;AN=46;BaseQRankSum=3.358;DP=361;FS=7.930;HRun=0;HaplotypeScore=49.6708;InbreedingCoeff=-0.0542;MQ=47.94;MQ0=70;MQRankSum=-0.607;QD=3.55;ReadPosRankSum=-0.052;VQSLOD=0.2626;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:4,1:2:3.01:0,3,40	./.	0/0:27,0:20:60.21:0,60,1610	0/0:19,0:18:44.61:0,45,1199	0/0:11,0:4:3.01:0,3,58	0/0:17,0:10:21.07:0,21,569	0/0:15,0:12:21.07:0,21,587	0/0:12,1:9:3.01:0,3,62	./.	0/0:10,0:3:9.03:0,9,213	0/0:9,1:4:9.03:0,9,231	0/0:13,0:7:15.05:0,15,324	0/0:15,0:6:9.03:0,9,187	0/0:17,0:9:24.08:0,24,636	0/0:14,0:3:3.01:0,3,84	0/0:21,0:5:8.99:0,9,145	0/0:15,0:9:12.04:0,12,248	0/0:13,0:10:15.05:0,15,398	0/0:25,0:16:42.14:0,42,1089	0/1:10,5:7:8:128,0,8	./.	0/1:10,2:4:53.80:54,0,63	0/0:5,0:2:3.01:0,3,84	0/0:36,0:23:23.94:0,24,551	./.	0/0:3,0:3:3.01:0,3,84	0/0:18,1:6:9.03:0,9,236	./.
chr10	88676031	.	TAGAC	T	426.17	PASS	AB=0.841;AC=7;AF=0.159;AN=44;BaseQRankSum=2.021;DP=549;FS=33.364;HRun=0;HaplotypeScore=56.1558;InbreedingCoeff=-0.0872;MQ=23.62;MQ0=181;MQRankSum=-3.982;QD=3.55;ReadPosRankSum=1.659;VQSLOD=0.0949;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:39,0:12:36.06:0,36,779	0/0:33,0:12:23.91:0,24,464	0/0:23,3:11:3.01:0,3,80	0/0:19,1:11:15.01:0,15,338	0/1:14,1:11:37.58:38,0,379	0/0:41,0:8:6.02:0,6,152	./.	0/1:18,2:10:46.75:47,0,151	0/1:15,9:16:99:200,0,141	0/0:14,0:7:6.02:0,6,159	0/0:17,1:7:11.94:0,12,198	0/0:24,0:10:3.01:0,3,79	0/0:22,0:5:3.01:0,3,80	0/0:24,0:9:12.04:0,12,296	./.	0/0:20,0:16:27.06:0,27,606	0/0:26,0:7:6.02:0,6,160	0/1:19,4:12:87.47:99,0,87	./.	1/1:15,2:8:3.01:56,3,0	0/1:15,6:11:70.55:102,0,71	0/0:28,0:17:15.05:0,15,399	0/0:9,0:4:6.02:0,6,156	0/0:16,0:5:3.01:0,3,50	0/0:20,1:4:3.01:0,3,80	./.
chr10	88676087	.	C	CTCTG	212.56	PASS	AB=0.934;AC=9;AF=0.300;AN=30;BaseQRankSum=4.494;DP=194;FS=48.129;HRun=0;HaplotypeScore=28.0051;InbreedingCoeff=-0.1233;MQ=36.07;MQ0=45;MQRankSum=-1.395;QD=4.34;ReadPosRankSum=0.908;VQSLOD=0.1831;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:28,0:3:9.03:0,9,169	./.	./.	0/1:8,0:6:61.88:62,0,111	./.	0/0:4,0:4:3.01:0,3,48	1/1:5,0:4:3.01:56,3,0	./.	0/1:5,1:4:40.21:40,0,56	0/0:7,1:4:3.01:0,3,63	1/1:10,0:2:5.75:54,6,0	0/0:6,0:2:3.01:0,3,63	0/0:9,0:4:3.01:0,3,36	0/0:8,0:3:2.69:0,3,63	./.	0/1:2,0:2:9.94:10,0,57	0/0:7,0:3:3.01:0,3,63	./.	./.	./.	./.	0/0:10,0:5:6.02:0,6,112	./.	0/1:5,0:4:11.11:11,0,39	0/1:10,3:10:43.06:85,0,43	./.
chr10	88676381	.	TTG	T	57.67	PASS	AC=2;AF=0.091;AN=22;BaseQRankSum=1.531;DP=163;FS=0.000;HRun=0;HaplotypeScore=14.2664;InbreedingCoeff=0.2236;MQ=18.87;MQ0=38;MQRankSum=0.096;QD=8.24;ReadPosRankSum=0.670;VQSLOD=2.7177;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:3:3.01:0,3,58	./.	./.	./.	0/0:4,1:4:2.92:0,3,17	0/0:4,0:4:3.01:0,3,58	0/0:6,0:3:6.02:0,6,115	0/0:24,0:11:24.08:0,24,377	./.	./.	0/0:8,2:7:3.01:0,3,58	./.	./.	./.	0/0:3,0:3:3.01:0,3,57	./.	0/0:4,0:4:6.02:0,6,95	./.	0/0:8,0:6:3.01:0,3,57	1/1:2,5:4:9.03:134,9,0	./.	./.	./.	0/0:6,0:6:3.01:0,3,58	./.	./.	./.	./.
chr10	88676386	.	A	AG	68.28	PASS	AB=0.846;AC=3;AF=0.115;AN=26;BaseQRankSum=1.030;DP=164;FS=0.000;HRun=1;HaplotypeScore=18.9764;InbreedingCoeff=0.1208;MQ=18.80;MQ0=42;MQRankSum=0.249;QD=3.59;ReadPosRankSum=-0.320;VQSLOD=-0.3621;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:3:3.01:0,3,39	./.	./.	./.	0/0:4,1:3:3.01:0,3,39	0/0:4,0:4:3.01:0,3,39	0/0:8,0:5:6.02:0,6,78	0/0:24,0:11:24.08:0,24,311	0/0:3,0:3:2.96:0,3,19	./.	0/1:9,2:8:13.92:32,0,14	./.	0/0:2,0:2:2.96:0,3,19	./.	0/0:5,0:5:5.97:0,6,58	./.	0/0:4,0:4:6.02:0,6,78	./.	0/0:8,0:5:3.01:0,3,39	1/1:3,5:5:9.03:122,9,0	./.	./.	./.	0/0:6,0:6:3.01:0,3,39	./.	./.	./.	./.
chr10	88676408	.	GT	G	486.41	PASS	AB=0.613;AC=19;AF=0.633;AN=30;BaseQRankSum=4.305;DP=120;FS=14.207;HRun=1;HaplotypeScore=25.9276;InbreedingCoeff=0.3726;MQ=39.83;MQ0=31;MQRankSum=-4.305;QD=9.35;ReadPosRankSum=2.681;VQSLOD=-0.7038;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:3:3.01:37,3,0	./.	0/0:26,0:8:23.96:0,24,327	0/0:15,0:3:6.02:0,6,78	0/0:6,0:3:3.01:0,3,30	1/1:0,2:2:6.02:74,6,0	1/1:2,4:4:6.02:74,6,0	0/1:7,12:7:56.70:62,0,57	1/1:0,2:2:3.01:37,3,0	./.	0/0:4,0:1:3.01:0,3,33	./.	1/1:0,3:3:6.02:74,6,0	./.	1/1:0,6:6:12.04:148,12,0	./.	./.	./.	1/1:2,3:2:3.01:37,3,0	0/0:4,0:2:2.90:0,3,16	./.	./.	./.	1/1:0,2:2:3.01:37,3,0	./.	1/1:1,2:3:2.98:21,3,0	./.	./.
chr10	88676439	.	A	AG	658.78	PASS	AB=0.833;AC=24;AF=0.750;AN=32;BaseQRankSum=6.000;DP=102;FS=13.233;HRun=0;HaplotypeScore=37.9253;InbreedingCoeff=0.4033;MQ=80.47;MQ0=2;MQRankSum=-5.848;QD=11.36;ReadPosRankSum=4.460;VQSLOD=2.5808;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:18,0:17:51.17:0,51,711	0/0:10,0:10:27.09:0,27,376	1/1:7,0:4:5.73:35,6,0	1/1:0,3:3:9.03:133,9,0	0/1:4,4:7:35.27:35,0,75	1/1:7,0:5:2.22:7,2,0	1/1:2,0:2:2.60:10,3,0	0/1:3,0:3:0.02:0,0,0	0/0:3,0:1:3.01:0,3,42	./.	1/1:1,3:4:6.02:89,6,0	1/1:0,2:2:3.01:45,3,0	1/1:1,6:7:15.05:223,15,0	./.	./.	./.	1/1:4,3:7:6.02:88,6,0	1/1:2,0:1:2.80:13,3,0	./.	./.	./.	./.	./.	1/1:2,0:2:2.50:9,2,0	1/1:1,3:3:6.02:89,6,0	./.
chr10	88676442	.	A	AT	824.56	PASS	AB=0.750;AC=22;AF=0.733;AN=30;BaseQRankSum=5.943;DP=101;FS=13.150;HRun=0;HaplotypeScore=37.9306;InbreedingCoeff=0.4066;MQ=80.82;MQ0=3;MQRankSum=-5.445;QD=15.56;ReadPosRankSum=5.081;VQSLOD=4.4062;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:18,0:17:51.16:0,51,696	0/0:10,0:10:30.01:0,30,377	1/1:1,5:4:6.02:86,6,0	1/1:4,0:4:9.03:135,9,0	0/1:9,0:8:36.29:36,0,75	./.	1/1:0,1:1:3.01:48,3,0	0/1:0,3:3:0.01:0,0,0	0/0:1,1:1:3.01:0,3,42	./.	1/1:3,1:4:6.02:90,6,0	1/1:2,0:2:3.01:45,3,0	1/1:6,1:7:15.05:224,15,0	./.	./.	./.	1/1:8,0:7:6.02:92,6,0	1/1:1,1:1:3.01:48,3,0	./.	./.	./.	./.	./.	1/1:0,2:2:3.01:48,3,0	1/1:4,0:4:6.02:89,6,0	./.
chr10	88677178	.	AGGCACGCAAATCAT	A	670	PASS	AB=0.954;AC=9;AF=0.205;AN=44;BaseQRankSum=0.982;DP=211;FS=12.253;HRun=0;HaplotypeScore=104.7999;InbreedingCoeff=0.0177;MQ=69.91;MQ0=12;MQRankSum=0.304;QD=8.93;ReadPosRankSum=2.304;VQSLOD=1.3696;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,1:1:3.01:132,3,0	./.	0/0:24,0:21:60.20:0,60,2526	0/0:16,0:15:41.60:0,42,1325	0/0:5,0:1:3.01:0,3,160	0/0:4,0:3:9.03:0,9,460	0/0:1,0:1:3.01:0,3,192	0/0:14,0:8:15.05:0,15,924	1/1:0,3:1:3.01:132,3,0	0/1:22,1:14:11.77:12,0,1404	0/1:8,0:4:16.97:17,0,90	0/0:2,0:2:6.02:0,6,318	0/0:4,3:6:9.03:0,9,481	0/0:3,0:2:6.02:0,6,296	0/0:6,5:6:6.02:0,6,382	0/0:7,1:5:15.05:0,15,727	0/0:2,0:2:6.02:0,6,330	./.	./.	0/1:15,1:10:99:108,0,1168	./.	0/0:6,0:2:3:0,3,46	0/1:3,0:2:15.78:16,0,101	./.	0/1:17,3:9:99:374,0,910	0/0:5,1:3:6.02:0,6,430	0/0:14,3:8:15.05:0,15,904	./.
chr10	88677456	.	CCA	C	5896.86	PASS	AB=0.751;AC=31;AF=0.775;AN=40;BaseQRankSum=9.907;DP=539;FS=93.265;HRun=0;HaplotypeScore=129.3351;InbreedingCoeff=0.5592;MQ=51.44;MQ0=70;MQRankSum=-9.631;QD=13.37;ReadPosRankSum=4.258;VQSLOD=0.9727;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,5:11:2.14:48,0,2	./.	0/0:32,0:29:76.87:0,77,1553	0/0:25,0:22:56.39:0,56,999	./.	0/1:10,19:16:14.58:265,0,15	1/1:5,14:15:27.09:373,27,0	1/1:15,1:8:18.93:190,19,0	1/1:17,12:14:15.05:203,15,0	1/1:11,9:9:23.93:245,24,0	./.	1/1:7,21:21:36.12:498,36,0	1/1:15,22:18:39.13:542,39,0	1/1:12,25:28:43.86:532,44,0	1/1:17,35:32:64.81:845,65,0	1/1:12,24:17:33.02:434,33,0	0/1:12,3:11:6.72:102,0,7	1/1:5,2:6:8.92:106,9,0	1/1:10,14:16:43.59:573,44,0	./.	0/0:5,2:2:4.23:0,4,15	./.	./.	1/1:11,6:13:11.95:128,12,0	./.	1/1:9,10:9:27.08:371,27,0	1/1:9,23:17:33:444,33,0	./.
chr10	88677460	.	CA	C	5656.34	PASS	AC=36;AF=0.900;AN=40;BaseQRankSum=9.667;DP=500;FS=90.151;HRun=2;HaplotypeScore=131.4381;InbreedingCoeff=0.8072;MQ=52.91;MQ0=68;MQRankSum=-8.553;QD=13.53;ReadPosRankSum=5.771;VQSLOD=1.4522;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,14:10:14.83:138,15,0	./.	0/0:31,0:30:76.26:0,76,1168	0/0:27,0:25:58.03:0,58,856	./.	1/1:1,25:14:7.41:240,7,0	1/1:1,15:12:27.08:319,27,0	1/1:0,16:8:21.07:291,21,0	1/1:1,28:14:15.05:182,15,0	1/1:2,13:5:12.04:157,12,0	./.	1/1:0,27:20:36.11:435,36,0	1/1:1,34:16:39.12:464,39,0	1/1:1,32:24:44.24:490,44,0	1/1:1,49:30:66.16:778,66,0	1/1:1,34:16:33.10:395,33,0	1/1:4,8:8:14.85:151,15,0	1/1:2,4:5:9:99,9,0	1/1:1,23:16:48.13:602,48,0	./.	1/1:2,4:1:2.90:16,3,0	./.	./.	1/1:6,10:12:12.04:157,12,0	./.	1/1:3,17:10:30.06:355,30,0	1/1:3,28:17:33.07:387,33,0	./.
chr10	88677684	.	T	TG	7318.70	PASS	AB=0.773;AC=43;AF=0.768;AN=56;BaseQRankSum=1.844;DP=881;FS=21.171;HRun=0;HaplotypeScore=136.0101;InbreedingCoeff=-0.0167;MQ=32.42;MQ0=80;MQRankSum=-1.653;QD=8.73;ReadPosRankSum=4.394;VQSLOD=2.9625;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,13:21:12.03:356,12,0	1/1:22,6:9:18.06:244,18,0	0/0:22,0:6:18.06:0,18,252	0/0:21,0:1:3.01:0,3,42	1/1:17,13:16:14.77:277,15,0	1/1:15,9:18:34.33:408,34,0	0/1:23,4:21:20.89:131,0,21	1/1:9,1:2:2.97:20,3,0	0/1:15,11:14:33.07:239,0,33	0/1:49,17:27:24.25:382,0,24	0/1:85,10:22:22.21:166,0,22	1/1:7,8:7:12.04:174,12,0	1/1:21,9:19:28.75:359,29,0	0/1:12,16:26:3.91:503,0,4	1/1:24,13:20:8.79:264,9,0	1/1:15,14:15:21.07:301,21,0	1/1:15,15:25:0.51:542,1,0	1/1:11,3:11:5.94:89,6,0	1/1:20,5:16:4.73:209,5,0	0/1:30,14:19:47.36:301,0,47	0/1:10,9:18:43.58:323,0,44	1/1:19,7:11:21.20:172,21,0	1/1:18,9:13:12.56:182,13,0	1/1:23,9:24:28.32:308,28,0	0/1:57,10:24:20.53:314,0,21	0/1:27,15:22:44.41:444,0,44	1/1:10,8:11:16.98:250,17,0	1/1:6,9:9:26.12:360,26,0
chr10	88677685	.	T	TG	7589.72	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.705;DP=881;FS=8.579;HRun=4;HaplotypeScore=145.1189;InbreedingCoeff=0.7410;MQ=32.28;MQ0=79;MQRankSum=-4.766;QD=9.06;ReadPosRankSum=0.841;VQSLOD=1.6184;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:22,12:22:35.79:323,36,0	1/1:26,1:9:18.05:227,18,0	0/0:22,0:6:17.92:0,18,185	0/0:21,0:1:3.01:0,3,34	1/1:24,6:16:30.02:328,30,0	1/1:22,2:18:32.97:340,33,0	1/1:17,12:20:15.01:147,15,0	1/1:8,1:3:2.97:20,3,0	1/1:22,4:13:21.02:212,21,0	1/1:59,6:27:44.99:490,45,0	1/1:87,8:22:44.89:438,45,0	1/1:14,2:8:12.01:117,12,0	1/1:28,6:23:38.83:348,39,0	1/1:28,2:28:51.88:508,52,0	1/1:26,8:18:27.06:324,27,0	1/1:24,4:14:23.91:195,24,0	1/1:26,3:24:50.98:549,51,0	1/1:8,5:10:5.99:49,6,0	1/1:22,4:16:29.91:267,30,0	1/1:38,7:19:17.78:445,18,0	1/1:18,0:16:23.82:181,24,0	1/1:14,11:11:27.05:301,27,0	1/1:21,6:13:30.06:320,30,0	1/1:25,8:24:36.01:363,36,0	1/1:54,8:20:33.05:335,33,0	1/1:42,3:22:38.86:312,39,0	1/1:16,3:12:21.04:235,21,0	1/1:14,1:9:26.90:216,27,0
chr10	88677686	.	G	GC	2439.70	PASS	AB=0.928;AC=33;AF=0.589;AN=56;BaseQRankSum=7.744;DP=863;FS=1.103;HRun=0;HaplotypeScore=158.7171;InbreedingCoeff=-0.0486;MQ=32.32;MQ0=76;MQRankSum=-5.999;QD=3.13;ReadPosRankSum=8.288;VQSLOD=2.6242;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,2:20:5.77:88,0,6	1/1:8,18:9:16.92:116,17,0	0/0:22,0:6:18.06:0,18,251	0/0:21,0:1:3.01:0,3,42	1/1:27,1:15:8.82:121,9,0	0/1:24,0:18:6.17:98,0,6	0/1:28,0:19:25.81:26,0,60	0/0:9,0:4:5.96:0,6,44	0/1:26,0:13:17.24:57,0,17	0/1:40,24:26:45.76:199,0,46	1/1:32,63:23:39.58:358,40,0	0/1:15,0:7:7.79:29,0,8	1/1:31,0:19:12.66:85,13,0	1/1:28,0:26:6.19:158,6,0	0/1:35,0:18:54.73:111,0,55	1/1:28,0:14:13.11:43,13,0	0/1:28,1:24:2.80:156,0,3	0/0:13,0:10:2.66:0,3,36	0/1:23,0:15:9.87:66,0,10	0/1:45,0:19:16.14:167,0,16	0/0:18,0:16:2.58:0,3,73	1/1:24,0:11:24.61:147,25,0	1/1:26,0:12:6.72:114,7,0	1/1:32,0:23:23.20:125,23,0	0/1:25,34:19:2.87:192,0,3	0/1:33,11:20:57.47:57,0,63	0/1:19,0:12:32.05:72,0,32	1/1:15,3:9:2.44:18,2,0
chr10	88677687	.	G	GT	2364.33	PASS	AB=0.992;AC=34;AF=0.607;AN=56;BaseQRankSum=6.807;DP=845;FS=0.539;HRun=0;HaplotypeScore=155.9009;InbreedingCoeff=-0.0619;MQ=32.29;MQ0=73;MQRankSum=-5.734;QD=3.05;ReadPosRankSum=7.716;VQSLOD=2.7607;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:20:18.78:60,0,19	1/1:28,0:9:17.06:109,17,0	0/0:23,0:6:18.06:0,18,251	0/0:20,0:1:3.01:0,3,42	1/1:27,0:14:7.79:136,8,0	0/1:22,0:17:9.26:95,0,9	0/1:25,0:17:22.84:29,0,23	0/0:11,0:6:8.94:0,9,67	0/1:26,0:14:17.65:60,0,18	0/1:61,2:26:43.76:193,0,44	1/1:93,2:23:37.10:260,37,0	0/1:15,0:7:6.68:27,0,7	1/1:30,0:18:13.04:88,13,0	1/1:28,0:26:22.44:160,22,0	0/1:33,0:17:41.95:113,0,42	1/1:29,0:14:10.97:35,11,0	0/1:28,0:23:2.32:158,0,2	0/1:11,0:9:0.31:0,0,16	0/1:22,0:15:8.95:74,0,9	0/1:40,3:18:12.47:259,0,12	0/0:15,0:13:1.47:0,1,67	1/1:24,0:11:24.46:141,24,0	1/1:21,3:11:27.49:204,27,0	1/1:32,0:23:21.38:115,21,0	0/1:59,0:19:4.28:96,0,4	0/1:43,0:20:29.80:30,0,62	0/1:18,0:11:33.63:69,0,34	1/1:19,0:9:0.99:16,1,0
chr10	88677689	.	G	GA	3484.18	PASS	AB=0.907;AC=40;AF=0.714;AN=56;BaseQRankSum=3.800;DP=800;FS=4.005;HRun=0;HaplotypeScore=147.4615;InbreedingCoeff=0.1728;MQ=32.67;MQ0=67;MQRankSum=-2.766;QD=4.67;ReadPosRankSum=4.198;VQSLOD=3.3405;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:20:5.40:77,0,5	1/1:29,0:9:17.43:124,17,0	0/0:22,0:6:17.93:0,18,224	0/0:20,0:1:3.01:0,3,42	1/1:25,0:15:25.59:162,26,0	0/1:22,1:17:3.21:145,0,3	1/1:21,1:14:12.06:89,12,0	0/0:12,0:6:13.82:0,14,98	1/1:24,0:12:1.63:58,2,0	1/1:57,1:23:27.10:204,27,0	1/1:89,0:20:17.72:181,18,0	1/1:13,3:8:12.50:61,13,0	0/1:27,3:20:58.36:81,0,58	0/1:23,5:25:1.35:221,0,1	1/1:26,5:16:11.51:187,12,0	0/1:24,4:13:1.04:32,0,1	1/1:23,3:21:38.10:336,38,0	1/1:9,2:8:3.47:11,3,0	1/1:18,4:15:19.96:239,20,0	0/1:33,3:17:3.85:278,0,4	0/1:10,2:11:4.98:49,0,5	1/1:20,2:10:25.65:222,26,0	1/1:20,1:11:27.82:195,28,0	0/1:25,5:21:9.36:169,0,9	1/1:57,0:19:29.87:144,30,0	0/1:38,1:16:4.43:73,0,4	0/1:14,2:9:1.52:67,0,2	1/1:18,1:9:9.65:79,10,0
chr10	88677776	.	G	GA	3560.51	PASS	AB=0.782;AC=21;AF=0.389;AN=54;BaseQRankSum=9.369;DP=1009;FS=244.604;HRun=0;HaplotypeScore=271.0855;InbreedingCoeff=-0.6790;MQ=25.83;MQ0=210;MQRankSum=-1.884;QD=4.05;ReadPosRankSum=4.673;VQSLOD=-0.3517;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:7:7.70:0,8,89	0/1:7,27:7:26.75:174,0,27	0/0:25,0:12:36.09:0,36,457	0/0:31,0:16:45.12:0,45,565	0/1:19,12:9:39.55:40,0,41	0/1:21,7:18:99:119,0,177	0/1:24,6:13:91.19:91,0,185	0/0:33,1:5:15.05:0,15,210	0/1:30,8:23:99:161,0,220	0/1:38,51:21:99:326,0,323	0/1:19,37:15:68.57:172,0,69	0/1:31,3:28:99:101,0,387	0/1:45,12:43:99:396,0,606	0/1:31,5:29:53.71:54,0,288	0/1:36,9:28:50.29:50,0,475	0/1:35,7:28:99:150,0,382	0/1:9,7:11:99:122,0,146	0/0:11,0:3:3.01:0,3,42	0/1:22,5:15:99:193,0,371	0/1:32,2:14:65.40:65,0,288	./.	0/1:17,6:11:62.37:215,0,62	0/1:21,6:14:99:117,0,188	0/0:9,0:5:3.01:0,3,42	0/1:49,39:31:99:223,0,524	0/1:26,11:16:99:127,0,312	0/1:44,14:36:99:403,0,435	0/1:34,12:12:99:262,0,137
chr10	88677787	.	CA	C	158.56	PASS	AB=0.990;AC=12;AF=0.222;AN=54;BaseQRankSum=7.257;DP=1127;FS=114.786;HRun=1;HaplotypeScore=400.9564;InbreedingCoeff=-0.1268;MQ=21.91;MQ0=201;MQRankSum=0.280;QD=0.28;ReadPosRankSum=-0.166;VQSLOD=-0.0105;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:8:5.16:42,5,0	0/1:40,1:13:51.05:51,0,75	0/0:16,0:3:9.03:0,9,142	0/0:23,0:6:18.06:0,18,284	0/1:36,0:15:2.71:3,0,11	0/0:31,0:21:6.92:0,7,80	0/0:29,0:10:14.19:0,14,123	0/0:46,0:6:17.85:0,18,221	0/0:40,0:26:4.59:0,5,197	0/1:123,2:39:40.34:40,0,476	0/1:60,0:20:36.22:51,0,36	0/0:38,0:34:0.29:0,0,250	0/0:50,1:40:16.39:0,16,507	0/1:38,0:29:9.48:9,0,161	0/1:46,0:32:7.02:7,0,165	0/1:37,1:29:47.45:47,0,260	0/0:23,0:12:9.38:0,9,170	0/0:12,0:4:6.02:0,6,95	0/0:27,0:16:25.30:0,25,354	0/0:32,3:18:5.63:0,6,113	./.	0/1:32,0:20:22.52:23,0,32	0/1:27,1:16:7.79:8,0,41	0/0:8,0:7:0:0,0,0	0/1:102,0:35:13.19:13,0,250	0/0:57,0:26:9.50:0,9,394	0/0:66,0:43:16.56:0,17,575	0/0:47,0:15:6.53:0,7,192
chr10	88677789	.	TC	T	2989.46	PASS	AB=0.820;AC=28;AF=0.519;AN=54;BaseQRankSum=8.950;DP=1184;FS=174.993;HRun=1;HaplotypeScore=408.3140;InbreedingCoeff=-0.3684;MQ=22.04;MQ0=195;MQRankSum=1.665;QD=2.78;ReadPosRankSum=-0.976;VQSLOD=-0.7098;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:9:1.67:5,2,0	0/1:13,29:13:48.51:109,0,49	0/0:16,0:3:9:0,9,114	0/0:21,0:4:12.04:0,12,185	1/1:24,14:16:5.69:61,6,0	1/1:28,7:25:14.43:109,14,0	0/1:26,3:9:35.17:35,0,44	0/0:50,1:7:20.94:0,21,222	0/1:30,12:27:93.82:198,0,94	0/1:72,56:39:99:170,0,830	1/1:25,39:20:12.77:191,13,0	0/1:38,3:37:67.38:67,0,139	0/1:44,10:43:99:149,0,307	0/1:32,6:30:79.61:132,0,80	0/1:42,8:36:77.81:104,0,78	0/1:32,8:31:99:165,0,215	0/1:18,6:11:61.28:61,0,167	0/0:14,0:6:9.04:0,9,79	0/1:22,6:16:99:205,0,302	0/1:31,8:19:63.85:143,0,64	./.	0/1:29,7:22:7.95:149,0,8	1/1:23,9:20:2.60:105,3,0	0/1:9,0:8:0:0,0,0	0/1:62,49:41:70.20:276,0,70	0/1:47,13:29:91.04:91,0,492	0/1:55,15:48:99:360,0,440	0/1:40,11:15:99:259,0,159
chr10	88677798	.	CTA	C	527.57	PASS	AB=0.962;AC=19;AF=0.380;AN=50;BaseQRankSum=5.122;DP=1141;FS=42.983;HRun=0;HaplotypeScore=453.1563;InbreedingCoeff=-0.2169;MQ=21.73;MQ0=182;MQRankSum=0.440;QD=0.76;ReadPosRankSum=-1.188;VQSLOD=0.4419;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:9:4.04:12,4,0	0/1:38,2:14:5.10:5,0,88	./.	./.	1/1:34,3:15:2.28:44,2,0	1/1:29,2:22:1.77:42,2,0	0/0:22,1:7:5.90:0,6,59	0/0:46,0:3:9.03:0,9,170	0/0:35,1:27:31.57:0,32,399	0/1:121,2:39:32.51:33,0,1393	0/0:61,3:21:5.42:0,5,114	0/1:37,0:34:2.85:3,0,131	0/0:50,1:41:0.56:0,1,368	0/1:32,2:28:98.06:112,0,98	0/1:45,0:34:20.63:21,0,60	0/1:36,0:29:21.12:21,0,273	0/1:30,0:14:3.50:4,0,197	0/0:14,0:8:14.84:0,15,186	0/1:34,3:12:42.78:43,0,184	0/1:36,1:18:31.75:32,0,131	./.	0/1:31,5:22:40.36:40,0,44	0/1:32,1:20:3.94:4,0,113	0/0:8,0:7:0:0,0,0	0/0:103,1:40:18.94:0,19,222	0/0:56,1:27:39.21:0,39,959	0/1:63,6:49:99:207,0,648	0/1:44,2:17:43.27:43,0,546
chr10	88677835	.	TAC	T	248.92	PASS	AB=0.943;AC=16;AF=0.296;AN=54;BaseQRankSum=4.950;DP=725;FS=2.066;HRun=0;HaplotypeScore=352.7455;InbreedingCoeff=-0.0805;MQ=31.62;MQ0=30;MQRankSum=-3.917;QD=0.70;ReadPosRankSum=-3.443;VQSLOD=0.7596;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:6:0.54:50,0,1	0/0:18,0:10:13.59:0,14,65	0/0:29,0:17:25.77:0,26,786	0/0:20,0:10:27.09:0,27,410	0/0:26,0:17:1.16:0,1,18	0/1:18,1:17:6.01:63,0,6	0/1:12,0:5:0:0,0,0	0/0:21,0:7:17.93:0,18,188	0/1:26,1:15:2.17:2,0,108	0/0:86,2:38:57.60:0,58,751	0/0:36,2:19:13.82:0,14,83	0/1:20,0:20:29.86:30,0,106	0/1:28,1:26:7.63:8,0,91	0/1:21,1:18:34.33:34,0,90	0/1:15,0:15:19.98:20,0,53	0/1:23,0:18:5.76:6,0,166	1/1:24,0:8:4.32:23,4,0	0/1:5,1:5:6.15:77,0,6	0/0:2,0:2:3:0,3,29	0/1:17,2:13:7.11:7,0,116	./.	0/1:28,1:21:14.24:40,0,14	0/1:18,3:15:23.58:24,0,79	0/0:5,0:4:0:0,0,0	0/1:73,2:32:2.47:2,0,102	0/0:49,1:27:34.83:0,35,453	0/0:41,2:32:12.92:0,13,280	0/0:21,0:13:25.16:0,25,279
chr10	88677847	.	TAC	T	342.41	PASS	AB=0.943;AC=20;AF=0.370;AN=54;BaseQRankSum=3.541;DP=644;FS=10.773;HRun=0;HaplotypeScore=338.8446;InbreedingCoeff=-0.2170;MQ=47.84;MQ0=10;MQRankSum=-2.704;QD=0.78;ReadPosRankSum=1.108;VQSLOD=1.0257;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,1:6:4.50:4,0,16	0/1:18,0:11:11.67:12,0,42	0/0:37,0:26:52.09:0,52,1124	0/0:27,0:17:27.83:0,28,488	0/1:27,0:20:0.39:0,0,5	0/0:19,1:17:13.01:0,13,84	0/1:3,0:2:0:0,0,0	0/0:14,0:6:15:0,15,176	0/1:18,3:10:21.34:21,0,41	0/1:73,3:33:63.98:64,0,298	0/1:30,1:17:0.21:30,0,0	0/1:14,0:14:29.18:29,0,85	0/1:20,2:21:15.51:16,0,60	0/1:15,2:14:22.33:22,0,81	0/1:17,0:15:8.13:8,0,39	0/1:17,3:16:3.92:4,0,85	1/1:21,1:6:1.02:20,1,0	1/1:9,0:8:2.16:53,2,0	0/0:1,0:1:1.82:0,2,5	0/0:13,1:11:2.93:0,3,117	./.	0/1:31,0:23:7.86:8,0,25	0/0:18,2:15:13.67:0,14,98	0/0:3,1:4:0:0,0,0	0/0:64,1:31:4.23:0,4,76	0/1:40,6:24:99:106,0,131	0/1:30,9:26:49.49:49,0,126	0/1:17,0:13:32.05:32,0,172
chr10	88677852	.	A	ATC	2218.57	PASS	AB=0.956;AC=28;AF=0.519;AN=54;BaseQRankSum=4.409;DP=740;FS=16.084;HRun=0;HaplotypeScore=363.5443;InbreedingCoeff=-0.3098;MQ=49.82;MQ0=19;MQRankSum=-3.920;QD=3.43;ReadPosRankSum=-3.733;VQSLOD=0.3823;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:6:14.83:143,15,0	0/1:22,1:16:53.13:53,0,77	0/0:44,0:32:83.43:0,83,1051	0/0:29,0:19:28.36:0,28,465	1/1:42,0:31:2.87:30,3,0	0/1:25,1:21:32.86:49,0,33	0/0:4,0:2:0:0,0,0	0/0:17,0:6:15.05:0,15,202	0/1:20,2:11:35.13:107,0,35	0/1:70,14:41:99:465,0,289	0/1:35,4:22:12:86,0,12	0/1:12,2:14:35.59:115,0,36	0/1:19,1:20:31.07:90,0,31	0/1:20,0:17:55.79:67,0,56	0/1:16,1:16:4.37:154,0,4	0/1:16,0:15:27.63:41,0,28	1/1:24,3:6:5.84:34,6,0	0/1:9,0:8:3.20:3,0,57	1/1:3,0:2:3.01:38,3,0	1/1:17,2:16:15.32:107,15,0	./.	0/1:36,1:26:25:151,0,25	0/1:26,0:19:4.94:28,0,5	0/1:4,0:4:0:0,0,0	0/1:64,3:34:45.25:45,0,54	0/1:43,0:24:99:257,0,214	0/1:37,2:28:79.22:100,0,79	0/1:14,0:13:9.20:206,0,9
chr10	88677863	.	C	CT	885.08	PASS	AB=0.880;AC=29;AF=0.537;AN=54;BaseQRankSum=4.234;DP=636;FS=67.818;HRun=0;HaplotypeScore=280.1187;InbreedingCoeff=0.1083;MQ=53.72;MQ0=30;MQRankSum=-4.801;QD=1.76;ReadPosRankSum=-4.424;VQSLOD=-0.3042;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:6:3.26:0,3,15	1/1:11,1:13:8.04:60,8,0	0/0:39,0:36:99:0,101,1351	0/0:28,0:24:60.25:0,60,813	1/1:29,6:31:16.06:90,16,0	0/1:20,3:18:6.73:7,0,15	1/1:3,0:2:2.74:12,3,0	0/0:17,0:8:17.78:0,18,113	0/1:17,2:10:10.50:10,0,18	0/1:54,8:33:99:146,0,125	0/1:17,6:14:3.58:11,0,4	1/1:9,1:11:1.92:44,2,0	1/1:11,1:11:9.23:50,9,0	0/1:16,1:11:3.50:45,0,3	1/1:16,1:16:8.47:25,8,0	0/1:14,0:9:4.81:22,0,5	0/0:22,5:5:4.23:0,4,26	0/1:9,0:8:19.52:24,0,20	0/0:4,0:2:0.47:0,0,1	1/1:17,0:16:15.31:74,15,0	./.	1/1:22,8:23:11.71:69,12,0	0/1:22,0:17:8.42:8,0,10	0/0:4,0:4:0:0,0,0	1/1:34,2:27:26.48:137,26,0	0/1:35,6:21:26.98:110,0,27	0/1:33,3:23:16.66:50,0,17	0/1:9,3:9:3.80:49,0,4
chr10	88677864	.	C	CTA	6420.09	PASS	AB=0.715;AC=47;AF=0.870;AN=54;BaseQRankSum=8.434;DP=735;FS=0.546;HRun=0;HaplotypeScore=275.1693;InbreedingCoeff=0.4283;MQ=50.64;MQ0=32;MQRankSum=-9.259;QD=9.61;ReadPosRankSum=-0.434;VQSLOD=4.2144;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,10:8:2.37:9,2,0	1/1:12,4:15:21.07:349,21,0	0/0:38,0:36:96.90:0,97,1428	0/0:28,0:24:62.86:0,63,892	1/1:26,17:36:17.36:189,17,0	1/1:11,15:20:25.91:344,26,0	1/1:2,3:2:3.01:47,3,0	1/1:1,17:9:27.02:436,27,0	1/1:9,11:13:11.77:152,12,0	1/1:43,24:36:54.81:1121,55,0	1/1:24,7:22:6.96:94,7,0	1/1:8,3:12:14.05:119,14,0	1/1:10,7:13:17.23:225,17,0	1/1:5,12:11:7.07:113,7,0	1/1:17,5:20:16.82:127,17,0	1/1:11,7:11:6.12:51,6,0	0/1:17,12:7:14.94:52,0,15	1/1:6,5:10:0.67:251,1,0	1/1:3,3:2:0.47:1,0,0	1/1:21,5:19:21.08:194,21,0	./.	1/1:24,13:30:31.34:368,31,0	1/1:15,13:20:5.67:91,6,0	0/1:3,3:5:0:0,0,0	1/1:41,13:32:47.95:634,48,0	1/1:21,19:25:51.10:774,51,0	1/1:14,22:25:32.50:521,32,0	0/1:11,1:12:28.90:158,0,29
chr10	88679562	.	TG	T	8603.16	PASS	AB=0.677;AC=12;AF=0.214;AN=56;BaseQRankSum=16.745;DP=1399;FS=1.471;HRun=1;HaplotypeScore=186.3006;InbreedingCoeff=-0.2730;MQ=51.68;MQ0=23;MQRankSum=5.225;QD=14.22;ReadPosRankSum=1.257;VQSLOD=4.6613;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:47:99:0,117,1865	0/1:16,12:27:99:418,0,635	0/0:33,0:10:30.09:0,30,426	0/0:28,0:7:21.02:0,21,255	0/1:37,30:66:99:1113,0,1262	0/1:37,21:56:99:442,0,1420	0/1:12,32:43:99:1090,0,380	0/0:58,0:52:99:0,153,2311	0/0:48,0:47:93.30:0,93,1453	0/1:35,33:64:99:1069,0,1282	0/1:25,21:45:99:667,0,866	0/1:27,23:49:99:493,0,709	0/0:59,1:59:99:0,144,2274	0/1:24,20:43:99:293,0,812	0/0:70,0:69:99:0,156,2441	0/0:42,0:42:72.21:0,72,1133	0/1:18,24:41:99:732,0,603	0/1:23,18:41:99:519,0,897	0/0:36,0:31:84.29:0,84,1335	0/0:60,0:57:99:0,166,2590	0/0:53,0:50:99:0,120,1913	0/1:31,23:52:99:732,0,1134	0/0:54,0:54:99:0,150,2336	0/0:38,0:36:99:0,99,1556	0/1:29,34:62:99:1036,0,1159	0/0:49,0:47:99:0,138,2177	0/0:77,0:75:99:0,202,3141	0/0:39,0:39:90.31:0,90,1437
chr10	88680310	.	GC	G	807.35	PASS	AB=0.707;AC=4;AF=0.077;AN=52;BaseQRankSum=1.769;DP=1210;FS=9.177;HRun=2;HaplotypeScore=63.3193;InbreedingCoeff=-0.0899;MQ=30.04;MQ0=296;MQRankSum=0.699;QD=5.28;ReadPosRankSum=0.032;VQSLOD=-0.2049;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:41:51.17:0,51,763	0/1:16,12:21:89.67:90,0,243	./.	./.	0/0:69,0:52:54.18:0,54,785	0/0:39,0:26:24.08:0,24,359	0/0:51,0:36:6:0,6,90	0/0:54,0:26:72.22:0,72,1056	0/0:39,0:21:18.06:0,18,265	0/1:26,23:32:99:416,0,667	0/1:23,13:30:99:221,0,389	0/0:52,0:28:33.11:0,33,493	0/0:40,0:17:18.06:0,18,269	0/0:44,0:28:20.94:0,21,314	0/0:53,0:29:30.10:0,30,449	0/0:34,0:18:14.84:0,15,224	0/1:24,16:26:99:188,0,359	0/0:27,0:18:33.11:0,33,494	0/0:49,0:22:60.20:0,60,899	0/0:66,0:55:99:0,114,1674	0/0:59,0:50:51.17:0,51,764	0/0:49,0:32:39.13:0,39,584	0/0:40,0:29:54.18:0,54,769	0/0:40,0:28:21.07:0,21,314	0/0:43,0:32:45.15:0,45,654	0/0:41,1:28:81.27:0,81,1214	0/0:36,0:19:24.06:0,24,338	0/0:22,0:16:30.10:0,30,449
chr10	88680777	.	AT	A	3545.67	PASS	AB=0.753;AC=6;AF=0.107;AN=56;BaseQRankSum=5.546;DP=1412;FS=12.069;HRun=3;HaplotypeScore=188.3732;InbreedingCoeff=-0.1299;MQ=36.04;MQ0=158;MQRankSum=2.338;QD=8.48;ReadPosRankSum=-3.193;VQSLOD=-0.7536;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:36,18:44:99:455,0,691	0/0:22,0:17:45.11:0,45,521	0/0:32,0:3:9.03:0,9,123	0/0:25,1:6:3.16:0,3,121	0/0:58,0:40:99:0,99,1190	0/0:56,0:41:98.96:0,99,1021	0/0:50,0:38:92.99:0,93,1007	0/1:45,37:65:99:1095,0,939	0/1:35,21:34:99:507,0,450	0/0:41,0:30:89.92:0,90,962	0/0:40,0:28:66.13:0,66,747	0/0:49,0:44:99:0,99,1179	0/0:51,0:40:99:0,102,1282	0/0:39,0:33:90.08:0,90,1057	0/0:49,0:39:99:0,102,1223	0/0:54,0:45:99:0,123,1451	0/0:33,0:32:81.11:0,81,971	0/0:42,0:31:75.10:0,75,902	0/0:31,0:18:47.96:0,48,546	0/0:58,0:32:75.18:0,75,938	0/1:62,25:81:99:551,0,1667	0/0:53,0:41:90.08:0,90,1032	0/0:48,0:33:72.15:0,72,857	0/0:33,0:26:63.16:0,63,825	0/0:58,0:43:99:0,111,1258	0/1:48,22:50:99:481,0,1096	0/0:71,0:58:99:0,123,1506	0/1:53,16:57:99:456,0,1157
chr10	88681172	.	T	TCTAA	490.34	PASS	AC=12;AF=0.429;AN=28;BaseQRankSum=-2.401;DP=216;FS=17.639;HRun=0;HaplotypeScore=47.3462;InbreedingCoeff=0.7399;MQ=49.66;MQ0=25;MQRankSum=-2.464;QD=19.61;ReadPosRankSum=-1.606;VQSLOD=1.1475;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:15:36.12:0,36,693	./.	0/0:20,0:17:51.17:0,51,944	0/0:14,0:12:34.67:0,35,611	1/1:2,1:3:6.02:150,6,0	./.	./.	0/0:32,0:27:78.18:0,78,1364	0/0:14,0:12:24.08:0,24,458	./.	1/1:1,2:2:6.02:163,6,0	./.	./.	./.	./.	./.	./.	./.	1/1:5,0:1:3:25,3,0	1/1:4,6:4:8.99:174,9,0	0/0:4,0:3:6.02:0,6,116	1/1:1,1:1:3.01:82,3,0	1/1:2,0:1:2.97:20,3,0	./.	./.	0/0:17,0:16:30.10:0,30,578	./.	0/0:20,0:19:33.11:0,33,639
chr10	88682509	.	A	ATCTATCTAT	3015.92	PASS	AB=0.988;AC=27;AF=0.482;AN=56;BaseQRankSum=4.298;DP=1631;FS=13.897;HRun=0;HaplotypeScore=390.8000;InbreedingCoeff=-0.6408;MQ=30.09;MQ0=62;MQRankSum=-1.498;QD=1.94;ReadPosRankSum=-9.021;VQSLOD=-0.5115;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:15:6.40:0,6,43	0/1:44,0:22:33.48:35,0,33	0/0:23,0:18:50.88:0,51,1315	0/0:19,0:13:28.92:0,29,798	0/1:67,4:45:30.67:132,0,31	0/1:57,0:18:42.94:71,0,43	0/1:31,0:13:27.43:33,0,27	0/1:69,0:36:99:312,0,104	0/1:63,2:47:99:197,0,299	0/1:117,0:47:18.19:18,0,348	0/1:72,0:35:8.07:20,0,8	0/1:64,0:30:49.69:73,0,50	0/1:58,0:34:99:242,0,247	0/1:86,3:44:72.55:204,0,73	0/1:62,0:36:84.16:84,0,813	0/1:82,0:51:99:182,0,1199	0/1:36,0:21:94.28:112,0,94	0/1:24,0:15:38.97:96,0,39	0/1:41,0:25:85.66:86,0,433	0/1:70,2:45:99:117,0,1121	1/1:12,0:10:3.01:101,3,0	0/1:55,1:34:51.44:255,0,51	0/1:64,0:44:0.91:1,0,1095	0/1:27,0:20:21.94:22,0,360	1/1:139,1:90:32.44:436,32,0	0/1:65,0:34:99:216,0,245	0/1:91,1:45:85.38:85,0,888	0/1:37,1:25:42.50:42,0,122
chr10	88682809	.	G	GT	2613.08	PASS	AB=0.761;AC=6;AF=0.111;AN=54;BaseQRankSum=0.039;DP=1505;FS=0.902;HRun=3;HaplotypeScore=226.3757;InbreedingCoeff=-0.1298;MQ=42.69;MQ0=181;MQRankSum=0.971;QD=8.89;ReadPosRankSum=1.700;VQSLOD=1.1010;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:44,24:64:99:684,0,896	0/0:19,0:12:27.08:0,27,321	0/0:38,0:7:6:0,6,60	./.	0/0:68,0:48:81.23:0,81,951	0/0:77,0:63:99:0,126,1478	0/0:78,0:60:99:0,108,1276	0/1:48,18:32:99:418,0,425	0/1:26,18:39:99:557,0,446	0/0:59,0:31:78.23:0,78,922	0/0:47,0:25:42.13:0,42,502	0/0:61,0:51:99:0,117,1372	0/0:50,0:42:96.29:0,96,1145	0/0:58,0:45:99:0,102,1131	0/0:47,0:36:90.19:0,90,1041	0/0:60,0:54:99:0,129,1508	0/0:38,0:27:60.18:0,60,719	0/0:55,0:49:99:0,105,1213	0/0:73,0:40:99:0,105,1183	0/0:62,0:44:99:0,102,1173	0/1:33,7:39:99:101,0,755	0/0:57,0:42:87.14:0,87,992	0/0:57,0:44:96.22:0,96,1126	0/0:52,0:44:99:0,105,1258	0/0:66,0:46:87.19:0,87,985	0/1:21,26:40:99:899,0,323	0/0:61,0:56:99:0,138,1633	0/1:23,5:18:77.71:78,0,406
chr10	88682865	.	A	AG	36339.55	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=6.437;DP=1162;FS=10.430;HRun=2;HaplotypeScore=234.0038;InbreedingCoeff=0.9958;MQ=53.07;MQ0=22;MQRankSum=-4.203;QD=32.56;ReadPosRankSum=5.504;VQSLOD=2.3083;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,84:84:99:2873,205,0	1/1:0,8:8:18.06:258,18,0	0/0:23,0:18:49.65:0,50,562	0/0:23,0:20:56.18:0,56,638	1/1:5,51:54:99:1546,108,0	1/1:3,43:46:99:1440,102,0	1/1:7,48:51:99:1938,138,0	1/1:5,36:36:99:1403,99,0	1/1:2,34:35:84.28:1207,84,0	1/1:8,23:19:50.19:676,50,0	1/1:2,18:15:39.06:535,39,0	1/1:7,55:58:99:2063,144,0	1/1:1,44:44:99:1689,120,0	1/1:9,44:47:99:1726,120,0	1/1:6,25:26:66.22:936,66,0	1/1:4,42:46:99:1589,111,0	1/1:4,22:24:51.12:709,51,0	1/1:2,32:32:69.23:987,69,0	1/1:5,32:35:95.99:1337,96,0	1/1:2,37:35:96.32:1379,96,0	1/1:8,44:50:99:1616,114,0	1/1:5,42:44:99:1545,111,0	1/1:3,42:42:99:1548,111,0	1/1:1,45:46:99:1517,108,0	1/1:0,31:27:72.03:937,72,0	1/1:3,44:43:99:1641,120,0	1/1:3,51:54:99:1996,141,0	1/1:1,38:34:87.29:1246,87,0
chr10	88684004	.	TAC	T	10837.95	PASS	AB=0.724;AC=20;AF=0.357;AN=56;BaseQRankSum=-2.559;DP=1176;FS=13.494;HRun=0;HaplotypeScore=298.4281;InbreedingCoeff=-0.5685;MQ=35.21;MQ0=65;MQRankSum=12.969;QD=11.23;ReadPosRankSum=0.207;VQSLOD=3.3929;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:24:41.98:0,42,534	0/1:6,2:4:33.62:34,0,120	0/0:29,0:5:15.05:0,15,300	0/0:23,0:7:21.05:0,21,342	0/1:16,16:23:99:447,0,197	0/1:57,20:62:99:762,0,1374	0/1:31,21:37:99:692,0,509	0/0:43,0:24:63.13:0,63,1155	0/0:40,0:29:72.19:0,72,1120	0/1:21,17:22:99:424,0,463	0/1:19,6:11:61.22:61,0,309	0/1:39,34:58:99:879,0,1006	0/1:49,21:50:99:518,0,949	0/1:40,15:42:99:445,0,1113	0/1:55,18:53:99:600,0,1322	0/1:39,33:59:99:1009,0,881	0/1:24,6:11:99:113,0,175	0/1:10,13:18:99:331,0,140	0/1:32,13:31:99:494,0,601	0/1:27,27:33:99:722,0,238	0/0:7,0:4:6.02:0,6,121	0/1:19,21:34:99:728,0,257	0/1:14,18:23:99:582,0,271	0/1:11,14:22:99:367,0,261	0/1:28,18:31:99:517,0,543	0/0:29,0:20:54.11:0,54,931	0/1:56,38:67:99:1111,0,1324	0/0:5,0:4:12.04:0,12,224
chr10	88684021	.	C	CT	4533.08	PASS	AB=0.854;AC=25;AF=0.481;AN=52;BaseQRankSum=11.180;DP=1428;FS=299.147;HRun=2;HaplotypeScore=367.3236;InbreedingCoeff=-0.7648;MQ=32.88;MQ0=136;MQRankSum=-4.490;QD=3.45;ReadPosRankSum=-3.136;VQSLOD=-0.3004;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:32,27:41:99:637,0,188	0/1:17,2:11:59.15:59,0,198	./.	./.	0/1:35,5:32:58.56:59,0,623	0/1:71,10:66:99:225,0,1508	0/1:51,5:36:51.13:51,0,766	0/1:39,17:24:99:259,0,415	0/1:33,15:31:99:355,0,477	0/1:52,4:33:5.16:5,0,728	0/1:30,7:22:99:210,0,188	0/1:79,6:61:92.22:92,0,1202	0/1:58,13:53:99:252,0,756	0/1:49,7:40:99:113,0,964	0/1:62,11:59:99:246,0,1257	0/1:66,13:65:99:240,0,1306	0/1:51,8:31:99:123,0,239	0/1:21,4:18:96.38:96,0,263	0/1:44,10:32:99:242,0,625	0/1:65,13:56:99:360,0,945	1/1:8,6:7:9.03:120,9,0	0/0:50,2:44:68.21:0,68,1275	0/1:36,9:34:50.66:51,0,640	0/1:28,6:29:99:201,0,406	0/1:47,7:37:99:158,0,801	0/1:26,9:27:99:190,0,561	0/1:83,18:70:99:189,0,1453	0/0:11,2:10:24.07:0,24,292
chr10	88684289	.	C	CA	4292.48	PASS	AB=0.782;AC=23;AF=0.442;AN=52;BaseQRankSum=-4.297;DP=1724;FS=44.408;HRun=2;HaplotypeScore=237.1441;InbreedingCoeff=-0.6805;MQ=25.35;MQ0=300;MQRankSum=-4.971;QD=2.83;ReadPosRankSum=-1.499;VQSLOD=-0.7647;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:50,48:69:99:295,0,249	0/0:9,2:11:19.45:0,19,179	./.	./.	0/0:32,8:29:6.51:0,7,461	0/1:32,13:44:24.55:25,0,257	0/1:34,11:26:40.30:40,0,245	0/1:83,42:64:99:1053,0,186	0/1:43,27:32:99:162,0,156	0/1:61,9:33:87:87,0,548	0/0:21,2:14:9.03:0,9,108	0/1:47,22:53:99:223,0,383	0/1:47,22:59:99:211,0,379	0/1:48,30:62:99:137,0,321	0/1:58,30:73:99:295,0,625	0/1:39,26:48:99:162,0,319	0/1:58,44:75:99:185,0,180	0/1:25,6:18:31.65:151,0,32	0/1:33,15:23:18.86:19,0,348	0/1:35,14:44:63:63,0,944	0/1:33,17:26:28.12:77,0,28	0/1:24,11:28:99:175,0,162	0/1:23,8:25:18.41:18,0,182	0/1:29,9:29:10.41:10,0,177	0/0:41,9:36:21.42:0,21,593	0/1:44,22:34:99:503,0,298	0/1:40,26:51:99:358,0,289	1/1:4,1:1:3.01:43,3,0
chr10	88684543	.	C	CT	12147.36	PASS	AB=0.947;AC=49;AF=0.907;AN=54;BaseQRankSum=9.595;DP=1764;FS=7.667;HRun=1;HaplotypeScore=379.1412;InbreedingCoeff=0.7982;MQ=39.82;MQ0=113;MQRankSum=-14.694;QD=7.13;ReadPosRankSum=-0.318;VQSLOD=1.1170;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,38:40:80.98:1010,81,0	1/1:13,25:17:31.93:333,32,0	0/0:28,0:26:77.04:0,77,930	0/0:23,0:22:54.13:0,54,665	1/1:43,31:38:13.15:291,13,0	1/1:69,12:56:31.42:319,31,0	0/1:68,4:49:1.82:224,0,2	1/1:65,6:60:99:1825,113,0	1/1:43,9:40:17.97:214,18,0	1/1:41,40:45:17.46:667,17,0	1/1:31,29:28:32.70:251,33,0	1/1:95,11:77:50.93:524,51,0	1/1:102,13:86:89.08:675,89,0	1/1:100,8:77:6.54:370,7,0	1/1:116,13:100:65.17:608,65,0	1/1:92,7:70:60.49:387,60,0	1/1:27,19:26:40.26:292,40,0	1/1:27,1:24:19.13:104,19,0	1/1:28,14:32:17.01:616,17,0	1/1:32,24:32:53.94:458,54,0	1/1:4,15:19:41.97:513,42,0	1/1:32,26:38:50.29:550,50,0	1/1:35,24:25:39.71:328,40,0	1/1:58,3:51:41.21:211,41,0	1/1:53,13:45:36.90:247,37,0	1/1:13,32:25:60:766,60,0	1/1:76,5:60:35.21:364,35,0	./.
chr10	88684545	.	C	CT	24082.59	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=5.224;DP=1763;FS=2.651;HRun=1;HaplotypeScore=326.3073;InbreedingCoeff=0.9903;MQ=40.18;MQ0=117;MQRankSum=-8.624;QD=14.12;ReadPosRankSum=7.979;VQSLOD=4.0477;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:43,7:36:61.56:843,62,0	1/1:26,7:16:27.09:395,27,0	0/0:28,0:28:80.83:0,81,1037	0/0:21,0:21:51.17:0,51,711	1/1:34,38:38:39.04:546,39,0	1/1:16,67:58:57.12:845,57,0	1/1:8,58:44:32.01:506,32,0	1/1:13,57:58:99:1894,132,0	1/1:11,41:41:14.98:186,15,0	1/1:51,34:47:99:1717,114,0	1/1:33,24:26:33.07:468,33,0	1/1:15,95:80:99:1625,104,0	1/1:21,98:88:99:1928,132,0	1/1:11,98:78:76.11:1250,76,0	1/1:20,111:102:99:1966,129,0	1/1:10,89:72:78.26:1210,78,0	1/1:23,19:24:45.11:673,45,0	1/1:3,25:25:33.11:522,33,0	1/1:22,18:29:75.23:1097,75,0	1/1:28,23:29:69.19:1037,69,0	1/1:19,1:18:27.91:422,28,0	1/1:34,26:38:55.30:756,55,0	1/1:28,31:25:36.05:517,36,0	1/1:5,56:51:51.14:850,51,0	1/1:17,54:46:48.16:729,48,0	1/1:44,12:32:68.73:952,69,0	1/1:10,71:58:75.23:1148,75,0	./.
chr10	88684649	.	GA	G	23689.34	PASS	AB=0.701;AC=50;AF=0.893;AN=56;BaseQRankSum=7.062;DP=1596;FS=11.566;HRun=2;HaplotypeScore=338.4962;InbreedingCoeff=0.7351;MQ=40.74;MQ0=156;MQRankSum=-0.822;QD=15.50;ReadPosRankSum=10.418;VQSLOD=1.8697;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,23:32:84.49:925,84,0	1/1:15,17:26:63.75:598,64,0	0/0:36,0:29:69.34:0,69,1123	0/0:32,0:21:55.84:0,56,670	1/1:29,20:41:87.07:788,87,0	1/1:29,47:55:64.25:964,64,0	0/1:37,39:55:0.12:905,0,0	0/1:15,8:15:4.41:311,0,4	1/1:16,21:25:59.63:661,60,0	1/1:98,33:98:57.39:1526,57,0	1/1:23,13:28:67.14:573,67,0	1/1:46,40:56:78.27:1025,78,0	1/1:45,49:62:99:1494,129,0	1/1:30,43:49:87.44:1021,87,0	1/1:56,54:72:28.10:1483,28,0	1/1:50,33:65:99:1138,102,0	1/1:24,27:41:99:1114,110,0	1/1:19,19:32:37.54:722,38,0	1/1:18,18:21:39.44:624,39,0	1/1:35,30:51:99:1109,130,0	1/1:9,16:25:59.26:652,59,0	1/1:32,34:49:99:1200,129,0	1/1:19,23:32:51.50:752,52,0	1/1:31,30:47:99:1017,109,0	1/1:28,28:48:99:933,104,0	1/1:21,20:29:59.96:816,60,0	1/1:63,33:63:99:1190,115,0	1/1:4,3:6:16.90:149,17,0
chr10	88684651	.	AG	A	22500.10	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=7.768;DP=1604;FS=5.230;HRun=4;HaplotypeScore=351.6766;InbreedingCoeff=0.9952;MQ=40.82;MQ0=152;MQRankSum=-1.684;QD=14.59;ReadPosRankSum=9.213;VQSLOD=1.7920;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:27,11:32:85.44:643,85,0	1/1:17,15:26:68.69:621,69,0	0/0:33,0:29:63.61:0,64,1022	0/0:28,0:21:44.76:0,45,619	1/1:29,22:43:88.67:798,89,0	1/1:50,26:55:99:915,109,0	1/1:49,28:56:99:987,112,0	1/1:16,6:17:32.56:270,33,0	1/1:24,14:25:59.52:475,60,0	1/1:55,72:95:99:1970,199,0	1/1:16,19:27:68.66:659,69,0	1/1:54,34:60:86.97:1093,87,0	1/1:57,41:65:99:1227,120,0	1/1:49,28:52:99:1001,102,0	1/1:65,45:72:99:1378,142,0	1/1:38,42:62:99:1291,123,0	1/1:32,23:44:99:914,117,0	1/1:23,14:31:42.25:571,42,0	1/1:26,10:22:54.80:363,55,0	1/1:35,31:53:99:1287,134,0	1/1:18,7:25:36.37:398,36,0	1/1:42,27:53:99:1166,136,0	1/1:30,11:33:33.88:508,34,0	1/1:36,27:49:97.92:966,98,0	1/1:34,23:50:85.43:971,85,0	1/1:26,15:29:76.65:587,77,0	1/1:44,52:66:99:1280,122,0	1/1:3,4:6:17.74:158,18,0
chr10	88684885	.	C	CG	6534.63	PASS	AB=0.816;AC=23;AF=0.411;AN=56;BaseQRankSum=17.328;DP=1671;FS=317.917;HRun=0;HaplotypeScore=305.9057;InbreedingCoeff=-0.5537;MQ=33.13;MQ0=289;MQRankSum=-5.465;QD=5.17;ReadPosRankSum=3.162;VQSLOD=-0.1325;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:60,15:51:99:565,0,200	0/1:33,4:19:97.30:97,0,373	0/0:31,0:2:6.02:0,6,73	0/0:35,0:7:15.02:0,15,149	0/1:47,5:33:14.65:15,0,326	0/1:51,22:57:99:587,0,1070	0/1:38,11:29:59.21:59,0,382	1/1:12,12:10:27.09:408,27,0	0/1:7,13:13:17.68:277,0,18	0/0:138,7:104:99:0,135,3522	0/1:80,10:62:8.57:9,0,1364	0/1:39,16:43:99:310,0,762	0/1:32,23:39:99:626,0,449	0/1:39,30:59:99:737,0,792	0/1:51,32:60:99:520,0,750	0/1:42,20:41:99:553,0,651	0/0:119,15:100:50.63:0,51,1490	0/1:38,5:28:65.89:66,0,441	0/1:40,8:27:99:170,0,391	0/1:38,7:30:99:148,0,354	0/1:48,2:36:99:315,0,393	0/0:47,4:30:51.10:0,51,675	0/1:53,9:37:36.57:37,0,358	0/1:48,13:48:93.65:94,0,460	0/1:62,7:33:99:124,0,604	0/1:41,12:34:99:323,0,674	0/1:59,28:66:99:497,0,1136	0/0:12,0:7:14.97:0,15,136
chr10	88684957	.	C	CA	5382.97	PASS	AB=0.712;AC=29;AF=0.518;AN=56;BaseQRankSum=16.048;DP=985;FS=80.553;HRun=1;HaplotypeScore=178.8273;InbreedingCoeff=-0.5461;MQ=22.11;MQ0=230;MQRankSum=0.119;QD=6.32;ReadPosRankSum=-0.370;VQSLOD=0.3666;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,14:15:92.61:172,0,93	1/1:6,7:3:8.95:86,9,0	0/0:41,0:5:12.03:0,12,142	0/0:21,0:2:3.01:0,3,38	0/1:8,8:10:59.67:136,0,60	0/1:29,22:44:99:475,0,786	0/1:28,4:21:8.69:9,0,388	0/0:64,7:20:51.17:0,51,661	0/1:10,8:9:70.32:70,0,137	0/1:54,30:54:99:550,0,1095	0/1:14,18:16:56.66:178,0,57	0/1:22,20:31:99:340,0,395	0/1:20,16:27:99:292,0,394	0/1:36,22:46:99:416,0,783	0/1:34,21:34:99:140,0,697	0/1:32,22:27:99:316,0,471	0/1:26,13:22:99:121,0,234	0/1:8,3:8:65.67:66,0,209	0/1:34,11:14:95.42:95,0,302	1/1:12,15:15:21.07:314,21,0	0/1:6,4:6:26.86:123,0,27	0/1:15,11:15:99:323,0,119	0/1:19,16:25:99:264,0,227	0/1:5,8:11:70.40:70,0,135	1/1:5,8:10:15.05:216,15,0	0/1:22,15:20:99:179,0,342	0/1:36,35:41:99:343,0,752	1/1:0,6:4:6.02:90,6,0
chr10	88685364	.	C	CAT	131.13	PASS	AB=0.947;AC=5;AF=0.109;AN=46;BaseQRankSum=6.092;DP=493;FS=32.397;HRun=0;HaplotypeScore=130.9252;InbreedingCoeff=0.6321;MQ=69.36;MQ0=4;MQRankSum=-5.356;QD=2.62;ReadPosRankSum=0.940;VQSLOD=0.9567;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:42.14:0,42,599	0/0:4,0:2:3.01:0,3,43	0/0:30,0:30:78.23:0,78,1057	0/0:25,0:25:69.12:0,69,937	1/1:1,3:3:5.05:42,5,0	./.	./.	0/0:33,1:30:49.57:0,50,1063	0/0:26,0:20:45.12:0,45,600	0/1:34,2:26:13.10:13,0,633	0/0:13,0:10:24.08:0,24,342	./.	0/0:30,4:27:66.22:0,66,935	./.	0/0:26,2:20:36.12:0,36,508	0/0:17,0:15:33.11:0,33,471	0/0:12,4:11:23.97:0,24,316	./.	0/0:17,0:16:39.08:0,39,533	0/0:22,1:19:19.64:0,20,604	0/0:25,0:24:57.15:0,57,784	1/1:5,5:10:18.04:189,18,0	0/0:17,3:12:24.08:0,24,342	0/0:24,0:22:35.92:0,36,512	0/0:14,0:12:29.99:0,30,380	0/0:25,1:22:36.11:0,36,498	0/0:20,2:17:9.01:0,9,522	0/0:14,0:9:18.04:0,18,237
chr10	88685369	.	A	ACAC	233.19	PASS	AB=0.914;AC=5;AF=0.109;AN=46;BaseQRankSum=5.874;DP=495;FS=25.059;HRun=0;HaplotypeScore=140.7703;InbreedingCoeff=0.5261;MQ=73.69;MQ0=1;MQRankSum=-4.469;QD=5.07;ReadPosRankSum=1.400;VQSLOD=1.2859;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:48.12:0,48,828	0/0:4,0:2:3.01:0,3,56	0/0:34,0:34:84.29:0,84,1531	0/0:31,0:31:87.24:0,87,1426	1/1:1,3:3:0.68:50,1,0	./.	./.	0/0:29,0:29:51.58:0,52,1442	0/0:26,0:20:45.15:0,45,838	0/1:29,1:25:13.67:14,0,946	0/0:16,0:12:27.06:0,27,468	./.	0/0:29,0:27:69.20:0,69,1247	./.	0/0:24,2:19:36.12:0,36,670	0/0:17,0:15:39.07:0,39,657	0/0:10,3:11:24.08:0,24,447	./.	0/0:16,0:16:36.12:0,36,671	0/0:26,0:23:30.34:0,30,909	0/0:25,0:24:63.22:0,63,1171	1/1:5,5:10:18.06:279,18,0	0/0:18,2:13:27.06:0,27,468	0/0:24,0:23:39.06:0,39,690	0/0:15,0:12:30.10:0,30,557	0/0:25,1:21:39.13:0,39,725	0/0:20,2:18:1.58:0,2,759	0/0:14,0:9:18.06:0,18,335
chr10	88686674	.	TC	T	42.78	PASS	AB=0.500;AC=11;AF=0.688;AN=16;BaseQRankSum=0.665;DP=69;FS=6.965;HRun=1;HaplotypeScore=27.3619;MQ=126.01;MQ0=1;MQRankSum=-1.491;QD=4.28;ReadPosRankSum=0.115;VQSLOD=0.1071;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:0,3:2:0:0,0,0	./.	0/0:21,0:11:22.86:0,23,208	0/0:22,0:19:5.95:0,6,274	./.	./.	./.	./.	./.	1/1:0,1:1:2.99:24,3,0	./.	./.	./.	./.	1/1:1,0:1:0.89:2,1,0	./.	./.	./.	1/1:0,2:2:6:52,6,0	./.	1/1:0,2:1:2.99:23,3,0	./.	./.	./.	./.	1/1:0,1:1:3:26,3,0	./.	./.
chr10	88692785	.	CA	C	1649.49	PASS	AC=38;AF=0.905;AN=42;BaseQRankSum=3.996;DP=185;FS=71.730;HRun=2;HaplotypeScore=24.4899;InbreedingCoeff=0.3949;MQ=33.74;MQ0=30;MQRankSum=-0.448;QD=13.30;ReadPosRankSum=1.253;VQSLOD=-0.1641;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:1:3.01:39,3,0	1/1:1,7:7:6.02:78,6,0	0/0:18,0:5:12.04:0,12,164	0/0:25,0:9:27.09:0,27,388	1/1:1,6:6:3.01:33,3,0	1/1:0,5:4:6.02:78,6,0	1/1:0,3:3:3.01:39,3,0	1/1:0,13:12:21.07:268,21,0	1/1:4,9:8:18.06:233,18,0	1/1:0,5:5:9.03:117,9,0	./.	1/1:0,8:6:6.02:71,6,0	1/1:0,6:5:9.03:117,9,0	1/1:0,6:5:6.02:78,6,0	./.	1/1:1,4:3:3.01:39,3,0	1/1:0,11:3:9.03:117,9,0	./.	1/1:3,3:2:6.02:78,6,0	./.	./.	1/1:0,8:4:6.02:71,6,0	1/1:0,5:2:3.01:39,3,0	./.	./.	1/1:0,6:2:6.02:78,6,0	1/1:0,5:4:9.03:116,9,0	1/1:0,2:2:6.02:78,6,0
chr10	88694221	.	GA	G	4793.39	PASS	AB=0.784;AC=20;AF=0.357;AN=56;BaseQRankSum=3.944;DP=1030;FS=107.936;HRun=1;HaplotypeScore=204.1684;InbreedingCoeff=-0.5673;MQ=32.89;MQ0=195;MQRankSum=-2.769;QD=5.74;ReadPosRankSum=0.952;VQSLOD=1.5011;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:40,15:35:99:206,0,292	0/0:15,2:10:14.93:0,15,180	0/0:32,0:21:60.04:0,60,925	0/0:19,0:15:45.15:0,45,719	0/1:37,6:20:50.79:51,0,168	0/1:24,12:20:99:295,0,101	0/1:32,7:26:87.36:87,0,282	0/1:48,22:43:99:558,0,886	0/1:23,11:16:99:140,0,202	0/1:25,11:16:53.66:54,0,347	0/0:26,4:16:21.07:0,21,333	0/1:24,11:22:99:320,0,107	0/1:21,12:19:79.27:277,0,79	0/1:28,14:29:99:366,0,267	0/1:35,11:29:99:363,0,326	0/1:22,16:25:99:469,0,140	0/0:22,2:17:15.05:0,15,231	0/1:16,7:16:99:182,0,172	0/1:35,14:34:99:278,0,462	0/0:37,1:23:24.01:0,24,352	0/1:26,15:29:99:334,0,156	0/0:24,3:7:9.03:0,9,143	0/1:43,5:28:22.64:23,0,410	0/1:20,4:18:46.85:47,0,128	0/1:55,9:36:16.87:17,0,621	0/1:23,18:27:99:467,0,381	0/1:27,11:23:99:259,0,158	0/0:8,0:4:9.03:0,9,143
chr10	88694236	.	G	GA	2320.83	PASS	AB=0.878;AC=22;AF=0.393;AN=56;BaseQRankSum=-1.529;DP=912;FS=5.377;HRun=0;HaplotypeScore=230.0833;InbreedingCoeff=-0.6474;MQ=30.98;MQ0=175;MQRankSum=-3.470;QD=3.14;ReadPosRankSum=1.262;VQSLOD=2.7542;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:44,7:34:99:101,0,418	0/1:10,5:8:35.83:41,0,36	0/0:28,0:10:27.09:0,27,365	0/0:20,0:12:23.98:0,24,269	0/1:25,4:13:39.06:39,0,74	0/1:27,2:18:59.45:59,0,376	0/1:30,2:20:20.65:21,0,295	0/1:69,7:44:99:122,0,1308	0/1:25,4:14:99:158,0,259	0/1:30,4:17:99:104,0,321	0/1:16,7:13:17.38:306,0,17	0/1:28,2:21:62.38:62,0,338	0/1:30,3:19:59.25:59,0,381	0/1:38,6:32:99:134,0,564	0/1:32,9:29:99:280,0,404	0/1:32,5:28:99:127,0,656	0/1:17,4:15:77.43:77,0,144	0/1:22,1:16:65.43:65,0,310	0/1:42,4:31:89.70:90,0,574	0/0:29,5:22:27.08:0,27,376	0/0:26,5:20:23.94:0,24,334	0/0:20,2:8:12.04:0,12,167	0/1:36,6:23:99:154,0,298	0/1:16,2:12:71.71:83,0,72	0/1:25,16:21:95.02:302,0,95	0/0:36,1:25:66.22:0,66,924	0/1:32,1:22:17.72:18,0,346	0/1:10,2:7:79.62:80,0,111
chr10	88694250	.	C	CTG	1472.53	PASS	AB=0.950;AC=17;AF=0.304;AN=56;BaseQRankSum=5.025;DP=919;FS=41.113;HRun=0;HaplotypeScore=282.6010;InbreedingCoeff=-0.2444;MQ=24.54;MQ0=141;MQRankSum=-2.824;QD=2.65;ReadPosRankSum=2.244;VQSLOD=1.6204;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:32:19.82:0,20,220	1/1:15,0:7:2.04:6,2,0	0/0:23,0:3:9.03:0,9,131	0/0:14,0:4:12.04:0,12,183	0/0:34,0:19:2.92:0,3,42	0/0:33,0:24:8.82:0,9,79	0/1:27,1:16:82.12:82,0,99	0/1:88,0:46:72.74:73,0,916	0/1:32,0:17:32.93:33,0,68	0/1:38,3:24:99:226,0,173	0/0:21,1:11:8.52:0,9,42	1/1:28,1:22:8.59:97,9,0	0/1:37,2:29:99:129,0,207	0/1:45,1:35:39.51:40,0,54	0/1:38,3:30:19.85:20,0,94	0/1:40,5:36:99:252,0,209	0/1:23,1:16:9.12:9,0,72	0/0:15,0:12:21.62:0,22,249	0/1:30,0:19:80.43:80,0,260	0/0:35,0:25:20.98:0,21,272	0/0:25,0:12:2.57:0,3,34	0/0:24,0:13:2.59:0,3,42	0/0:38,0:22:14.71:0,15,147	0/0:21,1:16:3.01:0,3,33	0/0:29,0:15:14.53:0,15,112	0/1:40,3:32:99:407,0,343	0/1:36,4:28:38.87:39,0,107	0/1:13,2:10:90.73:133,0,91
chr10	88694254	.	CTA	C	1164.54	PASS	AB=0.897;AC=17;AF=0.315;AN=54;BaseQRankSum=5.709;DP=908;FS=42.557;HRun=0;HaplotypeScore=257.5730;InbreedingCoeff=-0.2865;MQ=23.38;MQ0=131;MQRankSum=-2.995;QD=2.03;ReadPosRankSum=1.436;VQSLOD=1.4136;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,5:33:15.02:0,15,223	./.	0/0:22,0:3:8.99:0,9,89	0/0:12,0:2:6.01:0,6,69	0/1:32,5:21:18.09:18,0,51	0/0:23,10:24:9.03:0,9,158	0/1:23,3:15:24.01:24,0,94	0/1:71,11:44:99:166,0,944	0/1:31,2:19:23.33:23,0,108	0/1:37,5:27:99:105,0,437	0/0:22,2:15:9.02:0,9,91	0/1:21,8:22:3.09:58,0,3	0/1:33,7:30:86.18:86,0,221	0/0:32,11:34:6.57:0,7,192	0/1:35,3:29:23.64:24,0,143	0/1:43,6:41:99:204,0,222	0/1:21,0:14:11.01:11,0,41	0/0:11,0:10:22.32:0,22,356	0/1:23,4:16:99:114,0,305	0/0:32,1:24:21.07:0,21,343	0/1:21,2:10:0.01:0,0,0	0/0:23,2:13:2.88:0,3,40	0/0:36,1:25:12.51:0,13,177	1/1:20,2:16:2.58:14,3,0	0/0:23,1:14:15.04:0,15,196	0/1:32,11:33:99:392,0,548	0/1:39,4:30:37.04:37,0,283	0/1:12,0:9:37.03:37,0,125
chr10	88694258	.	CTA	C	1186.79	PASS	AB=0.970;AC=15;AF=0.300;AN=50;BaseQRankSum=5.674;DP=913;FS=31.242;HRun=0;HaplotypeScore=264.0600;InbreedingCoeff=-0.2934;MQ=23.51;MQ0=129;MQRankSum=-3.067;QD=2.30;ReadPosRankSum=1.359;VQSLOD=0.9095;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,3:34:15.05:0,15,254	./.	./.	./.	0/0:38,0:22:5.86:0,6,79	0/0:34,0:25:9.03:0,9,168	0/1:28,0:16:27.58:28,0,88	0/1:76,7:42:99:255,0,945	0/1:33,1:20:23.29:23,0,127	0/1:43,2:29:75.68:76,0,544	0/0:29,1:19:8.77:0,9,50	0/1:29,0:23:42.17:56,0,42	0/1:39,1:30:88.21:88,0,236	0/0:43,0:34:6.73:0,7,244	0/1:39,0:29:23.62:24,0,206	0/1:50,0:42:99:203,0,248	0/0:21,1:14:3.01:0,3,43	0/0:11,0:10:20.06:0,20,365	0/1:25,3:16:99:131,0,330	0/0:32,0:23:21.07:0,21,346	0/1:19,1:9:0:0,0,0	0/0:23,0:12:2.88:0,3,42	0/0:41,0:24:15.05:0,15,233	1/1:21,0:16:2.58:14,3,0	0/0:26,1:16:14.79:0,15,164	0/1:42,1:33:99:390,0,654	0/1:40,2:30:20.04:20,0,305	0/1:14,0:9:20.25:20,0,201
chr10	88694289	.	T	TTAC	153.88	PASS	AB=0.966;AC=13;AF=0.232;AN=56;BaseQRankSum=1.521;DP=883;FS=17.717;HRun=0;HaplotypeScore=243.3335;InbreedingCoeff=-0.0630;MQ=23.84;MQ0=85;MQRankSum=-5.871;QD=0.40;ReadPosRankSum=-3.184;VQSLOD=0.9888;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:26:20.75:21,0,144	1/1:14,0:9:0.47:1,0,0	0/0:17,0:4:9.03:0,9,149	0/0:19,0:5:12.04:0,12,200	0/0:30,0:20:5.20:0,5,64	0/1:40,0:30:30.91:31,0,185	0/0:44,0:29:12.04:0,12,211	0/1:64,0:28:6.28:6,0,388	0/1:31,3:19:22.42:22,0,224	0/0:47,0:34:43.13:0,43,694	1/1:31,0:20:3.44:21,3,0	0/1:34,1:24:21.35:21,0,131	0/0:35,0:25:4.43:0,4,390	0/1:41,2:33:42.59:43,0,77	0/0:39,1:32:16.26:0,16,261	0/0:47,2:43:5.52:0,6,680	0/0:21,0:14:5.99:0,6,49	0/0:9,0:9:17.55:0,18,267	0/0:30,0:16:9.14:0,9,249	0/0:30,0:25:23.44:0,23,311	0/0:14,0:5:3.01:0,3,55	0/0:22,0:16:6.44:0,6,81	0/0:40,0:25:8.36:0,8,80	0/1:14,1:11:2.58:3,0,3	0/1:24,0:19:10.27:10,0,96	0/0:42,0:35:13.09:0,13,758	0/1:43,0:29:99:110,0,199	0/0:12,0:10:24.47:0,24,286
chr10	88694290	.	CTA	C	749.25	PASS	AB=0.918;AC=15;AF=0.278;AN=54;BaseQRankSum=5.249;DP=886;FS=0.000;HRun=0;HaplotypeScore=230.7916;InbreedingCoeff=-0.3782;MQ=23.84;MQ0=85;MQRankSum=-4.009;QD=1.43;ReadPosRankSum=3.795;VQSLOD=2.1526;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,3:26:1.78:0,2,63	./.	0/0:18,0:4:11.25:0,11,130	0/0:19,0:5:15.05:0,15,205	0/0:29,1:20:5.86:0,6,62	0/0:35,8:33:29.62:0,30,370	0/1:40,4:28:21.21:21,0,46	0/0:62,3:29:10.44:0,10,194	0/1:31,1:19:5.10:5,0,342	0/1:46,3:36:71.76:72,0,581	1/1:27,4:20:0.47:1,0,0	0/0:30,5:24:0.05:0,0,308	0/1:28,7:25:99:102,0,393	0/1:36,6:32:42.12:53,0,42	0/1:38,2:32:71.24:71,0,203	0/1:49,0:43:85.96:86,0,456	0/0:21,0:14:3.01:0,3,41	0/0:9,0:9:1.78:0,2,71	0/1:28,4:16:7.98:8,0,90	0/1:23,8:25:36.55:213,0,37	0/0:14,0:5:3.01:0,3,41	0/0:20,2:16:17.82:0,18,245	0/1:35,5:25:4.88:5,0,43	0/0:15,0:11:3.01:0,3,38	0/0:22,0:18:1.06:0,1,153	0/1:38,4:35:99:151,0,512	0/1:44,2:29:18.94:19,0,285	0/1:12,0:10:76.22:76,0,155
chr10	88694292	.	ATC	A	1093.45	PASS	AB=0.922;AC=18;AF=0.333;AN=54;BaseQRankSum=1.908;DP=853;FS=11.160;HRun=0;HaplotypeScore=217.7219;InbreedingCoeff=-0.4566;MQ=23.69;MQ0=78;MQRankSum=-2.865;QD=1.93;ReadPosRankSum=0.888;VQSLOD=1.6701;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:22:30.06:30,0,44	./.	0/0:16,0:4:12.02:0,12,159	0/0:20,0:6:18.06:0,18,265	0/0:25,3:18:2.42:0,2,46	0/0:40,1:32:24.08:0,24,372	0/1:42,1:28:4:4,0,69	0/0:61,0:29:3.26:0,3,106	0/1:26,3:18:7.59:8,0,382	0/1:42,1:36:53.82:54,0,591	1/1:28,1:20:0.47:1,0,0	0/0:33,2:24:17.07:0,17,360	0/1:34,1:25:61.79:62,0,425	0/1:35,1:30:61.96:115,0,62	0/1:31,2:31:99:177,0,236	0/1:41,4:42:99:259,0,472	0/0:16,1:12:3.01:0,3,45	0/1:6,2:9:33.91:52,0,34	0/1:25,2:13:51.30:51,0,60	0/1:27,2:23:33.69:170,0,34	0/0:12,1:4:3.01:0,3,45	0/0:22,1:17:18.05:0,18,272	0/1:35,0:22:24.27:24,0,40	0/0:13,1:10:3.01:0,3,44	0/1:19,1:18:19.74:20,0,166	0/1:35,2:33:76.26:76,0,481	0/1:41,3:28:54.39:54,0,298	0/1:7,1:10:79.01:79,0,169
chr10	88694294	.	C	CTA	1925.18	PASS	AB=0.924;AC=19;AF=0.339;AN=56;BaseQRankSum=2.487;DP=846;FS=8.279;HRun=0;HaplotypeScore=213.0002;InbreedingCoeff=-0.4466;MQ=23.67;MQ0=72;MQRankSum=-4.193;QD=3.21;ReadPosRankSum=0.153;VQSLOD=1.1249;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,4:22:33.41:123,0,33	0/1:12,1:8:0:0,0,0	0/0:17,0:5:12.02:0,12,160	0/0:21,0:6:18.06:0,18,265	0/0:27,1:19:2.22:0,2,45	0/0:39,3:32:18.94:0,19,340	0/1:43,2:29:52.82:53,0,67	0/1:65,0:33:96.49:96,0,113	0/1:31,1:18:39.60:40,0,375	0/1:44,1:36:99:218,0,555	1/1:31,0:20:0.47:1,0,0	0/0:33,2:24:17.07:0,17,352	0/0:32,1:24:0.75:0,1,464	0/1:34,6:30:23.72:159,0,24	0/1:36,3:31:99:179,0,236	0/1:43,4:42:99:338,0,476	0/0:19,0:12:3.01:0,3,45	0/1:5,3:9:33.53:141,0,34	0/1:25,1:12:32.83:103,0,33	0/1:23,4:21:74.30:74,0,83	0/0:11,3:4:2.85:0,3,45	0/0:20,2:16:18.04:0,18,272	0/1:33,3:22:39.53:51,0,40	0/0:13,1:11:3.01:0,3,45	0/1:21,1:18:21.89:22,0,166	0/1:35,4:32:99:337,0,438	0/1:41,1:27:28.33:28,0,213	0/1:11,0:9:99:105,0,156
chr10	88694295	.	T	TAC	1278.98	PASS	AB=0.969;AC=20;AF=0.357;AN=56;BaseQRankSum=2.914;DP=822;FS=8.196;HRun=0;HaplotypeScore=204.8685;InbreedingCoeff=-0.4386;MQ=23.57;MQ0=72;MQRankSum=-4.062;QD=2.07;ReadPosRankSum=0.353;VQSLOD=1.8761;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:22:36.77:101,0,37	0/1:11,1:8:0:0,0,0	0/0:17,0:5:15.04:0,15,210	0/0:21,0:6:18.06:0,18,289	0/0:23,2:17:2.22:0,2,48	0/0:37,2:30:23.39:0,23,389	0/1:43,1:28:21.82:22,0,93	0/1:58,0:27:3.79:4,0,172	0/1:31,0:18:16.65:17,0,406	0/1:43,2:36:99:112,0,612	1/1:29,1:20:0.47:1,0,0	0/0:35,0:24:23.59:0,24,390	0/1:30,2:23:19.05:19,0,531	0/1:36,0:30:15.38:109,0,15	0/1:29,3:30:99:158,0,257	0/1:42,2:42:99:309,0,517	0/0:18,0:11:3.01:0,3,49	0/1:7,0:8:36.93:81,0,37	0/1:26,0:12:36.71:81,0,37	0/1:27,0:21:30.74:31,0,130	0/0:13,0:4:2.85:0,3,49	0/0:21,0:15:17.80:0,18,293	0/1:35,0:22:33.48:33,0,43	0/0:14,1:11:3.01:0,3,49	0/1:20,1:17:4.02:4,0,180	0/1:36,1:30:99:191,0,487	0/1:37,3:26:70.03:70,0,228	0/1:10,1:9:80.06:80,0,163
chr10	88695080	.	A	AC	110.07	PASS	AC=18;AF=0.692;AN=26;BaseQRankSum=4.857;DP=244;FS=30.213;HRun=0;HaplotypeScore=29.4586;InbreedingCoeff=0.4865;MQ=58.43;MQ0=36;MQRankSum=-5.141;QD=1.04;ReadPosRankSum=1.696;VQSLOD=0.5718;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:6,2:6:2.88:15,3,0	0/0:40,0:22:66.19:0,66,893	0/0:26,0:16:45.15:0,45,630	1/1:6,10:11:2.68:11,3,0	./.	0/0:6,0:2:3.01:0,3,34	./.	./.	1/1:6,1:4:3:27,3,0	1/1:8,6:9:5.27:21,5,0	0/0:2,2:3:3.01:0,3,35	1/1:1,2:2:2.74:12,3,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:4,9:7:8.10:34,8,0	1/1:6,10:8:10.71:44,11,0	./.	1/1:11,8:11:3.36:43,3,0	1/1:7,3:3:1.18:13,1,0	./.	./.
chr10	88695596	.	GA	G	1118	PASS	AB=0.759;AC=16;AF=0.333;AN=48;BaseQRankSum=1.034;DP=586;FS=144.758;HRun=3;HaplotypeScore=148.7342;InbreedingCoeff=-0.5493;MQ=55.24;MQ0=8;MQRankSum=-5.337;QD=2.50;ReadPosRankSum=3.643;VQSLOD=-0.5761;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,1:4:6.02:0,6,85	0/0:3,0:1:3.01:0,3,42	0/0:27,0:27:81.27:0,81,1151	0/0:19,0:18:45.15:0,45,638	0/1:14,8:12:22.13:22,0,110	0/1:29,10:29:99:178,0,316	0/1:17,7:15:13.03:13,0,274	0/1:37,6:25:63.33:63,0,512	0/1:29,5:19:4.01:4,0,379	0/1:20,8:11:62.28:62,0,74	0/1:9,5:5:28.07:28,0,76	0/1:20,7:16:47.15:47,0,270	0/1:15,12:17:99:193,0,137	0/1:13,10:17:81.22:81,0,270	0/1:17,9:16:50.16:50,0,233	0/1:23,10:27:99:109,0,344	0/0:13,2:6:9.03:0,9,127	./.	0/0:28,3:18:12.04:0,12,172	0/0:4,1:1:3.01:0,3,43	0/0:4,1:4:3.01:0,3,43	0/1:7,10:8:65.02:93,0,65	0/1:10,4:7:56.03:56,0,130	./.	./.	0/1:20,7:16:19.09:19,0,196	0/1:26,24:32:99:237,0,407	./.
chr10	88696008	.	CT	C	3226.07	PASS	AB=0.709;AC=29;AF=0.518;AN=56;BaseQRankSum=4.190;DP=584;FS=9.189;HRun=2;HaplotypeScore=117.8386;InbreedingCoeff=-0.6423;MQ=35.52;MQ0=58;MQRankSum=-4.261;QD=6.13;ReadPosRankSum=1.642;VQSLOD=0.2017;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,6:15:48.81:49,0,129	0/1:3,6:9:60.24:182,0,60	0/0:25,0:18:51.16:0,51,735	0/0:33,0:27:77.99:0,78,1110	1/1:8,12:12:9.03:105,9,0	0/1:13,12:14:99:113,0,120	0/1:7,4:5:22.89:23,0,86	1/1:3,3:3:9.03:105,9,0	0/1:13,8:11:59.31:183,0,59	0/1:9,17:14:60.42:215,0,60	0/1:6,8:10:46.29:90,0,46	0/1:13,10:14:99:176,0,113	0/1:27,5:14:99:107,0,178	0/1:18,7:17:99:110,0,159	0/1:28,7:20:99:103,0,206	0/1:14,19:13:99:145,0,136	0/1:11,4:8:83.86:84,0,92	0/1:2,2:3:19.89:29,0,20	0/1:13,6:8:86.95:87,0,89	0/1:10,12:9:6.60:220,0,7	0/1:11,3:12:77.97:78,0,135	0/1:5,10:10:8.68:188,0,9	1/1:5,17:17:12.39:424,12,0	0/1:10,6:9:47:90,0,47	0/1:5,7:8:44.43:90,0,44	0/1:17,9:9:66.80:87,0,67	0/1:27,20:29:99:216,0,330	0/1:5,6:5:32.87:90,0,33
chr10	88696080	.	A	AC	4612.04	PASS	AB=0.648;AC=32;AF=0.615;AN=52;BaseQRankSum=2.808;DP=320;FS=130.020;HRun=3;HaplotypeScore=109.6511;InbreedingCoeff=-0.0721;MQ=62.43;MQ0=6;MQRankSum=-5.569;QD=17.34;ReadPosRankSum=2.794;VQSLOD=0.5987;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:2,4:4:14.84:65,0,15	0/1:3,2:4:13.71:70,0,14	0/0:23,0:17:48.16:0,48,662	0/0:19,0:17:48.06:0,48,575	0/1:13,11:13:37.56:296,0,38	1/1:1,11:9:21.07:279,21,0	1/1:2,3:5:6.02:80,6,0	0/1:2,3:4:10.94:106,0,11	1/1:0,5:5:6.02:74,6,0	0/1:11,17:21:94.90:407,0,95	0/1:4,8:8:30.68:141,0,31	1/1:3,5:6:12.04:160,12,0	0/1:4,10:12:20.79:250,0,21	1/1:1,7:7:21.07:279,21,0	1/1:5,10:11:9.17:379,9,0	1/1:2,10:10:30.10:395,30,0	0/0:1,1:1:2.99:0,3,24	./.	1/1:5,3:5:3.01:38,3,0	0/1:4,7:11:0.92:234,0,1	./.	0/1:9,11:11:18.64:287,0,19	0/1:8,8:13:22.90:224,0,23	1/1:2,4:5:6.02:80,6,0	0/0:4,1:1:3.01:0,3,35	0/1:4,9:11:38.77:204,0,39	1/1:7,16:14:22.22:528,22,0	0/1:8,2:6:16.90:35,0,17
chr10	88696154	.	A	AT	205.85	PASS	AB=0.832;AC=8;AF=0.143;AN=56;BaseQRankSum=3.745;DP=512;FS=66.867;HRun=0;HaplotypeScore=155.1064;InbreedingCoeff=-0.1832;MQ=62.54;MQ0=4;MQRankSum=-3.221;QD=1.09;ReadPosRankSum=1.968;VQSLOD=0.5609;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:9:15.05:0,15,209	0/1:9,4:9:57.06:57,0,207	0/0:32,1:31:41.52:0,42,1022	0/0:24,0:21:45.46:0,45,735	0/1:23,9:24:38.09:38,0,305	0/0:16,0:15:30.10:0,30,419	0/0:8,1:8:24.04:0,24,313	0/1:19,2:19:37.77:38,0,630	0/0:11,0:11:21.07:0,21,293	0/1:15,3:13:23.59:24,0,248	0/1:13,7:11:90.47:90,0,163	0/0:14,0:14:33.03:0,33,414	0/0:14,1:15:1.54:0,2,426	0/0:10,1:10:24.08:0,24,335	0/0:22,0:22:57.07:0,57,731	0/0:25,0:21:45.15:0,45,628	0/0:4,0:4:12.04:0,12,168	0/0:9,0:9:8.94:0,9,101	0/0:19,0:15:30.07:0,30,396	0/0:23,3:18:12.63:0,13,593	0/0:8,0:8:9.03:0,9,126	0/0:21,4:17:39.13:0,39,544	0/1:23,5:21:42.95:43,0,422	0/0:7,1:7:12:0,12,145	0/1:27,7:25:42.43:42,0,691	0/1:21,2:18:5.03:5,0,502	0/0:20,0:18:51.11:0,51,672	0/0:7,7:8:12.04:0,12,168
chr10	88696428	.	CCA	C	16952.40	PASS	AB=0.545;AC=51;AF=0.911;AN=56;BaseQRankSum=8.698;DP=545;FS=13.003;HRun=0;HaplotypeScore=157.7444;InbreedingCoeff=0.7418;MQ=52.91;MQ0=7;MQRankSum=-6.054;QD=35.69;ReadPosRankSum=5.318;VQSLOD=6.0941;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:42.10:601,42,0	1/1:0,5:5:12.04:183,12,0	0/0:28,0:19:51.17:0,51,971	0/0:42,0:27:78.26:0,78,1435	1/1:1,13:14:18.06:275,18,0	1/1:2,23:25:63.21:963,63,0	1/1:1,10:11:24.08:367,24,0	1/1:7,24:23:54.18:826,54,0	1/1:0,19:19:57.11:818,57,0	0/1:2,10:11:24.37:423,0,24	1/1:1,21:22:54.18:812,54,0	1/1:0,24:24:66.22:996,66,0	1/1:2,24:26:63.21:962,63,0	1/1:0,16:16:48.16:733,48,0	1/1:3,33:36:93.31:1408,93,0	1/1:0,16:16:45.15:687,45,0	1/1:0,9:9:15.05:229,15,0	1/1:0,15:15:42.10:616,42,0	1/1:8,17:22:45.15:688,45,0	1/1:0,22:22:54.18:825,54,0	1/1:0,14:14:33.11:491,33,0	1/1:1,21:22:48.16:733,48,0	1/1:2,16:18:36.12:549,36,0	1/1:1,13:14:26.83:413,27,0	1/1:0,9:9:24.08:354,24,0	1/1:2,18:20:51.15:756,51,0	1/1:1,25:26:75.25:1112,75,0	1/1:0,3:3:9.03:131,9,0
chr10	88696918	.	A	AATAG	34209.39	PASS	AB=0.552;AC=51;AF=0.911;AN=56;BaseQRankSum=-6.319;DP=757;FS=4.704;HRun=0;HaplotypeScore=106.1323;InbreedingCoeff=0.7984;MQ=70.27;MQ0=0;MQRankSum=-8.699;QD=49.01;ReadPosRankSum=7.128;VQSLOD=5.4269;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:31:54.19:1362,54,0	1/1:0,14:15:33.11:869,33,0	0/0:31,0:28:64.93:0,65,1045	0/0:28,0:26:56.31:0,56,913	1/1:2,29:33:69.24:1748,69,0	1/1:1,28:28:60.21:1558,60,0	1/1:4,13:17:18.06:475,18,0	1/1:8,29:38:98.59:1752,99,0	1/1:3,24:27:51.18:1347,51,0	1/1:3,25:29:75.24:1754,75,0	1/1:3,22:25:54.19:1394,54,0	1/1:1,21:23:45.15:1139,45,0	1/1:4,32:38:66.23:1715,66,0	1/1:1,27:29:45.15:1114,45,0	1/1:4,27:32:60.21:1511,60,0	1/1:4,18:22:36.12:951,36,0	1/1:1,10:12:15.05:396,15,0	0/1:3,13:16:7.69:637,0,8	1/1:1,13:14:39.13:977,39,0	1/1:5,42:48:90.31:2188,90,0	1/1:2,21:24:33.11:871,33,0	1/1:0,26:27:57.20:1449,57,0	1/1:7,24:32:59.89:1512,60,0	1/1:2,17:20:42.14:1109,42,0	1/1:2,23:26:54.19:1399,54,0	1/1:3,28:31:81.05:1762,81,0	1/1:2,39:41:78.27:2034,78,0	1/1:0,16:19:45.15:1185,45,0
chr10	88697404	.	G	GT	11001.18	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=8.277;DP=443;FS=40.150;HRun=4;HaplotypeScore=138.1576;InbreedingCoeff=0.8305;MQ=53.67;MQ0=0;MQRankSum=-6.840;QD=27.50;ReadPosRankSum=4.814;VQSLOD=1.9275;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,5:5:9.03:123,9,0	1/1:4,9:13:21.07:286,21,0	0/0:25,0:25:66.13:0,66,711	0/0:16,0:16:30.07:0,30,398	1/1:2,41:41:96.32:1301,96,0	1/1:2,14:16:39.13:532,39,0	1/1:0,7:6:6.02:82,6,0	1/1:2,11:12:36.08:468,36,0	1/1:2,12:11:30.10:410,30,0	1/1:1,10:11:18.02:221,18,0	1/1:5,18:21:45.10:576,45,0	1/1:3,12:14:33.11:450,33,0	1/1:0,17:17:45.15:614,45,0	1/1:0,11:10:27.09:369,27,0	1/1:3,17:19:39.13:526,39,0	1/1:3,10:11:30.10:404,30,0	1/1:0,6:4:6.02:82,6,0	1/1:3,6:9:18.04:219,18,0	1/1:6,8:12:15.05:205,15,0	1/1:3,25:26:52.70:808,53,0	./.	1/1:2,22:24:45.15:612,45,0	1/1:3,22:24:51.17:680,51,0	1/1:2,3:3:9.03:123,9,0	1/1:2,14:15:24.04:306,24,0	1/1:2,18:20:48.13:635,48,0	1/1:4,22:24:57.19:778,57,0	1/1:1,4:5:15.04:192,15,0
chr10	88698235	.	G	GC	14195.88	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=9.977;DP=459;FS=37.246;HRun=0;HaplotypeScore=225.6307;InbreedingCoeff=0.8181;MQ=74.99;MQ0=0;MQRankSum=-12.051;QD=35.49;ReadPosRankSum=8.097;VQSLOD=0.0250;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:14:33.11:526,33,0	1/1:1,12:13:39.09:589,39,0	0/0:23,0:23:69.23:0,69,964	0/0:36,0:36:99:0,104,1337	1/1:2,19:20:39.12:586,39,0	1/1:0,12:12:30.10:468,30,0	1/1:0,3:3:3.01:48,3,0	1/1:1,10:9:24.08:383,24,0	1/1:1,27:28:66.23:1051,66,0	1/1:4,16:19:36.12:574,36,0	1/1:2,9:11:24.08:366,24,0	1/1:2,20:22:54.18:860,54,0	1/1:1,12:13:30.10:478,30,0	1/1:2,17:19:45.15:717,45,0	1/1:2,24:26:57.19:908,57,0	1/1:5,26:31:78.27:1243,78,0	1/1:2,6:8:15.05:226,15,0	1/1:3,8:11:21.07:334,21,0	1/1:3,11:13:24.06:338,24,0	1/1:1,18:19:45.15:717,45,0	1/1:2,7:9:12.04:175,12,0	1/1:4,16:20:51.17:811,51,0	1/1:4,7:11:18.06:268,18,0	1/1:2,5:7:3.01:48,3,0	1/1:1,9:10:24.08:382,24,0	1/1:1,16:17:48.16:763,48,0	1/1:1,16:17:48.16:764,48,0	1/1:1,12:13:36.12:574,36,0
chr10	88698715	.	CTA	C	230.58	PASS	AB=0.982;AC=10;AF=0.185;AN=54;BaseQRankSum=0.486;DP=296;FS=3.504;HRun=0;HaplotypeScore=124.2288;InbreedingCoeff=0.2201;MQ=42.74;MQ0=18;MQRankSum=-3.358;QD=2.56;ReadPosRankSum=0.578;VQSLOD=2.4963;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:7:4.83:0,5,48	0/0:2,0:2:3.01:0,3,37	0/1:8,0:7:8.31:8,0,235	0/0:9,0:5:11.87:0,12,129	0/0:18,0:17:2.94:0,3,45	0/0:19,0:19:17.76:0,18,236	0/0:13,0:10:9.03:0,9,173	0/1:24,2:19:99:254,0,130	1/1:7,4:11:3:35,3,0	0/1:16,0:14:6.46:6,0,222	1/1:10,0:9:5.49:23,5,0	0/0:10,0:10:17.09:0,17,294	0/0:9,0:7:3:0,3,25	0/0:13,0:12:6.02:0,6,99	0/0:9,0:8:6.02:0,6,93	0/0:8,0:8:14.70:0,15,150	./.	0/0:5,0:5:12.04:0,12,165	0/0:7,0:5:12.04:0,12,181	0/0:11,0:11:15.02:0,15,173	0/1:14,0:13:6.83:7,0,37	0/0:11,0:11:2.99:0,3,23	0/0:8,0:7:3.01:0,3,43	0/0:3,0:3:6.02:0,6,86	0/0:16,0:16:17.02:0,17,214	0/0:13,0:11:21.05:0,21,270	0/0:10,0:10:15.03:0,15,184	1/1:5,0:3:7.56:27,8,0
chr10	88698719	.	CTA	C	551.95	PASS	AB=0.948;AC=17;AF=0.340;AN=50;BaseQRankSum=1.684;DP=286;FS=24.629;HRun=0;HaplotypeScore=121.2769;InbreedingCoeff=0.0601;MQ=51.82;MQ0=16;MQRankSum=-3.594;QD=3.56;ReadPosRankSum=1.625;VQSLOD=1.0572;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:4.83:0,5,48	./.	0/1:12,0:10:0.15:0,0,292	0/0:12,1:10:1.01:0,1,129	0/0:18,0:17:2.94:0,3,45	0/1:18,0:18:12.74:13,0,141	0/0:12,0:9:9.03:0,9,173	1/1:20,0:14:14.59:108,15,0	0/0:10,1:11:0.47:0,0,1	0/1:10,5:13:99:205,0,159	1/1:5,5:9:6.02:91,6,0	0/1:9,1:10:26.10:26,0,271	./.	0/0:13,0:12:6.02:0,6,99	0/0:7,0:6:6.02:0,6,76	0/1:8,0:8:5.04:5,0,75	./.	0/0:6,0:6:12.04:0,12,165	0/0:6,0:4:8.90:0,9,101	0/1:11,0:11:15.52:16,0,18	0/1:14,1:14:7.10:7,0,37	1/1:9,0:9:2.60:10,3,0	0/0:9,0:8:3:0,3,25	0/0:3,0:3:6.02:0,6,83	0/1:14,1:15:8.50:73,0,8	0/0:11,0:9:12.04:0,12,162	0/1:7,0:7:3.95:4,0,72	1/1:2,3:3:9.03:135,9,0
chr10	88698721	.	A	ATC	914.99	PASS	AB=0.951;AC=25;AF=0.521;AN=48;BaseQRankSum=0.935;DP=283;FS=39.558;HRun=0;HaplotypeScore=123.6908;InbreedingCoeff=0.2482;MQ=55.97;MQ0=16;MQRankSum=-1.992;QD=5.29;ReadPosRankSum=0.964;VQSLOD=1.4514;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:7:4.83:0,5,48	./.	0/1:13,0:11:0.41:0,0,292	0/1:13,0:11:1.79:2,0,128	0/0:16,0:15:2.94:0,3,40	0/1:14,3:17:70.64:121,0,71	0/0:12,0:9:9.03:0,9,129	1/1:16,0:10:16.45:91,16,0	1/1:11,0:11:2.96:19,3,0	0/1:15,0:13:7.01:7,0,150	1/1:10,0:9:5.49:35,5,0	0/0:10,0:10:15.05:0,15,214	./.	0/0:14,0:13:6.01:0,6,68	0/1:7,0:6:13.14:13,0,37	1/1:6,2:8:8.24:97,8,0	./.	0/1:6,0:6:26.20:26,0,180	0/1:6,1:5:45.84:46,0,77	1/1:10,2:12:12.04:179,12,0	0/0:13,1:13:3.20:0,3,64	1/1:8,1:9:3.01:45,3,0	./.	0/0:3,0:3:3:0,3,25	1/1:10,5:15:21.04:275,21,0	0/0:11,0:9:12.03:0,12,155	1/1:5,1:6:6.02:91,6,0	1/1:5,0:3:7.09:24,7,0
chr10	88698727	.	CTA	C	140.51	PASS	AB=0.905;AC=20;AF=0.455;AN=44;BaseQRankSum=2.044;DP=276;FS=31.760;HRun=0;HaplotypeScore=131.3509;InbreedingCoeff=0.2394;MQ=73.67;MQ0=12;MQRankSum=-2.515;QD=1.02;ReadPosRankSum=-0.776;VQSLOD=0.9983;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:6.01:0,6,60	./.	0/0:23,0:18:10.64:0,11,458	0/1:22,0:18:0:0,0,171	0/0:16,0:15:2.92:0,3,23	0/1:17,0:17:8.92:9,0,156	0/0:11,0:8:9.03:0,9,172	./.	0/0:12,0:12:3.01:0,3,30	0/0:15,0:14:1.41:0,1,106	1/1:10,0:9:5.54:25,6,0	0/0:10,0:10:15.05:0,15,288	./.	0/1:12,1:12:18.94:19,0,25	0/1:6,2:7:22.31:30,0,22	0/1:5,1:6:3.74:11,0,4	./.	0/0:7,0:7:18.04:0,18,189	0/0:7,0:5:11.99:0,12,106	1/1:10,0:10:5.20:36,5,0	1/1:13,0:12:2.74:13,3,0	1/1:7,0:7:2.68:11,3,0	./.	./.	1/1:15,0:15:15.32:60,15,0	0/1:7,1:8:35.06:35,0,50	1/1:3,0:3:4.82:18,5,0	1/1:5,0:3:4.97:17,5,0
chr10	88698805	.	T	TCAAA	10299.88	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=1.493;DP=331;FS=122.025;HRun=0;HaplotypeScore=135.1265;InbreedingCoeff=0.8784;MQ=86.88;MQ0=0;MQRankSum=-8.923;QD=55.08;ReadPosRankSum=2.611;VQSLOD=1.4528;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:4:6.02:157,6,0	0/0:2,0:2:6.02:0,6,109	0/0:20,0:20:54.12:0,54,910	0/0:14,0:14:33.09:0,33,522	1/1:3,10:13:27.09:705,27,0	1/1:1,18:19:54.11:1294,54,0	1/1:0,2:2:6.02:157,6,0	0/0:25,0:24:60.19:0,60,1057	1/1:3,3:7:9.03:235,9,0	0/0:17,0:16:36.12:0,36,654	0/0:20,0:19:39.13:0,39,709	1/1:1,5:6:15.01:333,15,0	1/1:1,7:10:21.03:490,21,0	1/1:3,8:12:27.05:628,27,0	1/1:1,5:6:15.01:333,15,0	1/1:2,7:9:21.07:549,21,0	0/0:16,0:16:21.07:0,21,382	1/1:2,2:4:3.01:78,3,0	1/1:2,1:6:12.01:229,12,0	1/1:4,21:24:66.14:1507,66,0	0/0:14,0:14:21.07:0,21,382	1/1:4,9:14:27.09:701,27,0	1/1:6,12:19:35.88:898,36,0	1/1:0,1:1:3.01:78,3,0	1/1:2,9:12:27.09:705,27,0	0/0:12,0:12:30.10:0,30,546	1/1:3,14:18:48.16:1222,48,0	0/0:4,0:4:12.04:0,12,218
chr10	88699158	.	T	TG	138.03	PASS	AB=0.692;AC=15;AF=0.577;AN=26;BaseQRankSum=4.561;DP=207;FS=1.518;HRun=1;HaplotypeScore=23.3617;InbreedingCoeff=0.3791;MQ=38.82;MQ0=34;MQRankSum=-2.422;QD=2.56;ReadPosRankSum=2.291;VQSLOD=-0.7223;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:1,2:3:3.01:0,3,42	0/0:18,0:5:15.05:0,15,200	0/0:23,0:6:17.73:0,18,204	1/1:2,2:2:2.80:13,3,0	./.	./.	./.	./.	0/1:5,4:7:29.96:63,0,30	1/1:2,4:5:5.72:29,6,0	./.	./.	./.	./.	./.	./.	./.	0/0:15,3:5:0:0,0,0	1/1:4,4:2:2.80:13,3,0	0/0:4,1:3:3.01:0,3,37	./.	1/1:0,2:2:2.90:16,3,0	./.	1/1:4,7:6:14.43:77,14,0	1/1:6,7:8:2.74:19,3,0	./.	1/1:0,1:1:2.90:16,3,0
chr10	88699232	.	AG	A	769.34	PASS	AC=18;AF=0.692;AN=26;BaseQRankSum=7.142;DP=139;FS=41.794;HRun=1;HaplotypeScore=56.0997;InbreedingCoeff=0.6292;MQ=110.05;MQ0=2;MQRankSum=-6.924;QD=20.25;ReadPosRankSum=3.169;VQSLOD=1.4775;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,5:5:8.89:92,9,0	0/0:23,0:23:66.18:0,66,931	0/0:26,0:26:75.18:0,75,1062	1/1:0,4:4:6.02:79,6,0	./.	./.	./.	./.	1/1:0,1:1:3.01:33,3,0	1/1:0,5:5:8.89:94,9,0	./.	./.	./.	./.	./.	0/0:3,1:2:3.01:0,3,48	./.	./.	1/1:0,7:6:13.29:162,13,0	0/0:5,0:1:3.01:0,3,40	1/1:0,4:4:7.62:46,8,0	1/1:0,3:3:6.02:81,6,0	./.	1/1:0,8:8:21.05:259,21,0	1/1:0,1:1:3.01:40,3,0	./.	./.
chr10	88699237	.	T	TACA	1864.18	PASS	AC=20;AF=0.769;AN=26;BaseQRankSum=7.555;DP=144;FS=64.000;HRun=0;HaplotypeScore=73.3793;InbreedingCoeff=0.6551;MQ=112.34;MQ0=2;MQRankSum=-7.213;QD=34.52;ReadPosRankSum=2.130;VQSLOD=1.6324;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,5:6:12.04:275,12,0	0/0:22,0:22:60.03:0,60,897	0/0:23,0:23:63.11:0,63,984	1/1:1,3:4:6.02:136,6,0	./.	./.	./.	./.	1/1:1,0:2:3.01:55,3,0	1/1:4,3:7:8.26:153,8,0	./.	./.	./.	./.	./.	1/1:2,1:2:3.01:46,3,0	./.	./.	1/1:4,4:7:17.91:268,18,0	0/0:1,0:1:2.90:0,3,16	1/1:0,4:4:9.03:148,9,0	1/1:2,2:3:6.02:105,6,0	./.	1/1:3,7:10:27.01:565,27,0	1/1:3,1:4:12.04:228,12,0	./.	./.
chr10	88699436	.	ACAG	A	87.45	PASS	AB=0.939;AC=10;AF=0.192;AN=52;BaseQRankSum=1.124;DP=376;FS=0.000;HRun=0;HaplotypeScore=51.5709;InbreedingCoeff=-0.1102;MQ=79.06;MQ0=143;MQRankSum=-2.964;QD=0.71;ReadPosRankSum=-5.080;VQSLOD=-0.1460;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,3:8:21.07:0,21,315	0/0:2,0:2:6.02:0,6,103	0/0:23,0:21:60.12:0,60,1242	0/0:21,0:15:45.12:0,45,915	1/1:7,0:7:2.50:20,2,0	0/0:7,2:8:15.05:0,15,224	0/0:16,1:7:12.04:0,12,181	./.	0/0:21,2:13:27.09:0,27,423	0/0:4,0:3:9.03:0,9,137	0/0:5,0:4:3.01:0,3,44	0/0:16,1:9:0.08:0,0,251	0/0:19,4:15:26.96:0,27,408	0/1:25,3:15:29.83:30,0,252	0/1:10,2:6:35.85:36,0,167	0/1:14,0:12:18.42:18,0,249	0/0:14,22:1:3.01:0,3,44	0/0:6,3:3:3.01:0,3,43	./.	0/0:4,0:3:6.02:0,6,89	0/0:22,1:1:3.01:0,3,45	0/1:4,0:4:13.98:14,0,39	0/1:5,0:5:30.96:31,0,35	0/1:22,6:4:0:0,0,0	0/0:6,0:4:3.01:0,3,45	0/1:12,1:10:36.91:37,0,197	0/1:12,0:10:27.47:27,0,149	0/0:4,0:3:9.03:0,9,133
chr10	88700035	.	CTTG	C	13123.81	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=10.865;DP=492;FS=1.962;HRun=0;HaplotypeScore=139.2686;InbreedingCoeff=0.9083;MQ=67.10;MQ0=0;MQRankSum=-10.942;QD=29.76;ReadPosRankSum=7.322;VQSLOD=5.0879;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:29:54.01:832,54,0	1/1:0,8:8:24.08:399,24,0	0/0:26,0:25:69.24:0,69,1536	0/0:25,0:25:75.26:0,75,1656	1/1:1,16:17:35.53:434,36,0	1/1:3,11:14:24.08:399,24,0	1/1:4,10:14:18.06:299,18,0	1/1:5,21:26:57.18:923,57,0	1/1:2,20:22:36.12:599,36,0	1/1:3,14:17:36.12:587,36,0	1/1:3,15:18:39.13:648,39,0	1/1:3,17:20:21.07:349,21,0	1/1:14,0:14:33.10:521,33,0	1/1:1,13:14:33.11:549,33,0	1/1:22,0:22:24.04:384,24,0	1/1:18,0:18:36.12:596,36,0	1/1:1,17:18:27.09:449,27,0	1/1:1,8:9:15.05:250,15,0	1/1:7,0:6:12.04:198,12,0	1/1:21,0:20:36:598,36,0	1/1:4,9:13:9.03:150,9,0	1/1:3,22:25:60.21:998,60,0	1/1:15,0:15:30.10:498,30,0	1/1:9,0:9:8.93:135,9,0	1/1:4,18:22:51.17:848,51,0	1/1:1,20:21:48.16:799,48,0	1/1:15,0:15:21.07:333,21,0	1/1:3,10:13:21.07:350,21,0
chr10	88700037	.	TG	T	2609.14	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=10.390;DP=453;FS=5.044;HRun=1;HaplotypeScore=155.1611;InbreedingCoeff=0.6689;MQ=74.91;MQ0=0;MQRankSum=-10.980;QD=6.56;ReadPosRankSum=8.521;VQSLOD=0.4584;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:6.73:77,7,0	1/1:8,0:8:17.76:56,18,0	0/0:28,0:27:81.02:0,81,1175	0/0:27,0:27:78.23:0,78,1176	0/1:16,0:16:18.78:19,0,56	1/1:12,0:12:17.76:56,18,0	1/1:10,0:10:13.32:42,13,0	1/1:21,0:21:39.78:125,40,0	1/1:20,0:20:26.64:84,27,0	1/1:17,0:17:24.89:78,25,0	1/1:17,0:17:28.86:91,29,0	1/1:19,0:19:15.54:49,16,0	1/1:1,12:13:32.10:215,32,0	1/1:13,0:13:24.42:77,24,0	1/1:2,20:22:29.21:192,29,0	1/1:1,17:18:38.66:270,39,0	1/1:17,0:17:19.98:63,20,0	1/1:8,0:8:11.10:35,11,0	1/1:0,5:5:11.91:85,12,0	1/1:3,15:18:44.50:306,44,0	1/1:9,0:9:6.66:21,7,0	1/1:23,0:23:44.40:139,44,0	1/1:0,14:14:29.60:195,30,0	1/1:2,6:8:11.10:65,11,0	1/1:19,0:19:37.74:119,38,0	1/1:20,0:20:35.52:112,36,0	1/1:0,13:13:20.23:133,20,0	1/1:12,0:12:15.54:49,16,0
chr10	88700039	.	TTC	T	3617.82	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=12.813;DP=470;FS=5.609;HRun=0;HaplotypeScore=158.6758;InbreedingCoeff=0.1463;MQ=74.59;MQ0=0;MQRankSum=-8.518;QD=8.70;ReadPosRankSum=11.028;VQSLOD=1.3142;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:58.72:114,0,59	1/1:8,0:8:21.43:89,21,0	0/0:29,0:28:84.29:0,84,1628	0/0:25,0:25:72.25:0,72,1429	0/1:20,0:20:38.16:38,0,81	1/1:11,0:11:21.43:88,21,0	0/1:13,0:13:38.54:39,0,42	1/1:22,0:22:24.16:169,24,0	1/1:20,0:20:32.14:133,32,0	0/1:19,0:19:44.58:77,0,45	0/1:17,0:17:30.12:97,0,30	1/1:18,0:18:18.75:77,19,0	1/1:1,12:13:32.63:285,33,0	1/1:13,0:13:29.46:121,29,0	1/1:4,20:24:26.66:232,27,0	1/1:2,17:19:37.29:357,37,0	0/1:19,0:19:23.56:67,0,24	0/1:9,0:9:2.50:39,0,3	1/1:1,5:6:12.02:113,12,0	1/1:2,15:17:40.90:373,41,0	0/1:13,0:13:13.42:13,0,54	1/1:22,0:22:37.30:202,37,0	1/1:1,14:15:19.89:248,20,0	1/1:1,6:7:8.73:64,9,0	1/1:19,0:19:30.61:170,31,0	1/1:20,0:20:42.85:177,43,0	1/1:0,13:13:17.97:175,18,0	1/1:10,0:10:2.75:59,3,0
chr10	88702050	.	C	CCTAA	26160.38	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.303;DP=575;FS=6.099;HRun=0;HaplotypeScore=104.7792;InbreedingCoeff=0.9063;MQ=48.35;MQ0=3;MQRankSum=-5.277;QD=48.45;ReadPosRankSum=6.440;VQSLOD=5.4555;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:14:29.97:602,30,0	1/1:3,4:4:8.99:177,9,0	0/0:22,0:22:54.03:0,54,872	0/0:13,0:13:30.10:0,30,545	1/1:6,30:34:90.31:2352,90,0	1/1:5,23:24:57.20:1490,57,0	1/1:1,5:5:9.03:235,9,0	1/1:12,16:19:33.11:762,33,0	1/1:4,15:18:39.13:1018,39,0	1/1:7,18:22:45.15:1164,45,0	1/1:9,24:25:63.12:1583,63,0	1/1:2,11:13:33.11:863,33,0	1/1:6,12:14:39.13:1017,39,0	1/1:3,16:19:39.13:1019,39,0	1/1:1,17:20:51.18:1333,51,0	1/1:3,19:21:51.13:1274,51,0	1/1:2,8:9:9.03:235,9,0	1/1:7,10:15:21.07:550,21,0	1/1:3,6:9:21.06:456,21,0	1/1:11,20:28:54.19:1411,54,0	1/1:2,7:8:17.98:354,18,0	1/1:5,13:17:36.08:882,36,0	1/1:5,26:27:75.17:1840,75,0	1/1:4,6:9:21.07:548,21,0	1/1:4,25:28:66.18:1651,66,0	1/1:7,18:22:54.19:1383,54,0	1/1:11,17:25:45.15:1176,45,0	1/1:5,13:15:30.10:785,30,0
chr10	88703931	.	TGG	T	9603.14	PASS	AB=0.933;AC=47;AF=0.839;AN=56;BaseQRankSum=1.121;DP=504;FS=3.081;HRun=11;HaplotypeScore=108.5869;InbreedingCoeff=0.8665;MQ=66.71;MQ0=0;MQRankSum=-1.615;QD=22.28;ReadPosRankSum=7.529;VQSLOD=3.9711;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:26:26.99:0,27,281	1/1:2,10:12:27.07:287,27,0	0/0:25,0:21:37.77:0,38,447	0/1:12,0:13:5.11:5,0,139	1/1:3,13:17:30.03:375,30,0	1/1:3,21:24:60.14:638,60,0	1/1:2,17:20:47.84:491,48,0	1/1:9,16:26:44.83:458,45,0	0/0:7,0:14:21.01:0,21,239	1/1:4,10:14:33.08:350,33,0	1/1:5,9:14:24.05:254,24,0	1/1:2,20:22:60.15:638,60,0	1/1:1,20:21:54.12:575,54,0	1/1:5,11:16:33.06:351,33,0	1/1:2,14:16:30.07:319,30,0	1/1:5,14:19:39.08:415,39,0	1/1:3,20:23:45.10:479,45,0	1/1:5,12:16:30.06:319,30,0	1/1:5,6:12:17.94:229,18,0	1/1:3,8:11:24.04:254,24,0	1/1:7,27:34:75.13:797,75,0	1/1:2,8:10:27.06:286,27,0	1/1:3,14:17:41.76:446,42,0	1/1:1,13:15:39.09:415,39,0	0/0:7,0:7:6.02:0,6,92	1/1:5,11:17:32.80:329,33,0	1/1:4,23:27:63.12:670,63,0	1/1:1,7:8:21.05:224,21,0
chr10	88703941	.	GGA	G	2300.02	PASS	AB=0.972;AC=31;AF=0.554;AN=56;BaseQRankSum=11.633;DP=485;FS=7.419;HRun=0;HaplotypeScore=128.2846;InbreedingCoeff=-0.1178;MQ=68.20;MQ0=0;MQRankSum=1.574;QD=5.68;ReadPosRankSum=12.991;VQSLOD=-0.3815;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:35.79:0,36,391	1/1:11,0:11:0.49:76,0,0	0/0:26,0:21:37.80:0,38,573	0/0:17,0:15:8.95:0,9,296	0/1:22,0:21:64.17:64,0,106	0/1:25,0:25:34.83:171,0,35	0/1:20,0:20:16.12:93,0,16	0/1:24,0:23:84.11:84,0,111	0/0:13,0:13:27.02:0,27,327	1/1:12,1:11:24.10:128,24,0	0/1:13,2:15:70.20:87,0,70	1/1:22,0:22:7.42:199,7,0	0/1:22,0:22:13.92:112,0,14	1/1:11,1:12:26.88:114,27,0	0/1:16,0:16:18.49:57,0,18	0/1:16,0:16:12.68:67,0,13	1/1:22,0:22:18.03:156,18,0	1/1:15,0:13:5.02:94,5,0	0/1:10,2:11:41.65:60,0,42	0/1:9,0:9:2.07:67,0,2	1/1:29,0:29:23.05:248,23,0	0/1:11,1:12:26.14:68,0,26	0/1:20,2:22:62.79:141,0,63	1/1:14,0:14:32.08:115,32,0	0/0:7,0:7:20.97:0,21,217	0/1:15,0:15:48.86:54,0,49	0/1:28,0:27:34.59:184,0,35	0/1:9,0:9:25.82:37,0,26
chr10	88704332	.	G	GA	21543.53	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.733;DP=580;FS=8.360;HRun=0;HaplotypeScore=59.9610;InbreedingCoeff=0.9959;MQ=64.23;MQ0=1;MQRankSum=-1.328;QD=40.73;ReadPosRankSum=4.985;VQSLOD=5.0646;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:25:63.11:974,63,0	1/1:2,7:9:21.07:336,21,0	0/0:29,0:27:72.13:0,72,923	0/0:22,0:21:45.33:0,45,743	1/1:2,16:18:36.12:574,36,0	1/1:1,27:27:72.25:1150,72,0	1/1:0,15:15:39.13:612,39,0	1/1:4,39:41:99:1810,117,0	1/1:1,22:23:57.19:910,57,0	1/1:1,26:27:75.21:1150,75,0	1/1:0,17:17:42.14:670,42,0	1/1:0,18:18:48.03:706,48,0	1/1:0,26:26:66.23:1053,66,0	1/1:0,9:9:27.09:431,27,0	1/1:1,32:33:93.25:1454,93,0	1/1:0,16:16:42.09:639,42,0	1/1:0,15:15:42.14:671,42,0	1/1:0,18:18:48.16:767,48,0	1/1:0,19:20:57.19:897,57,0	1/1:0,15:15:33.11:527,33,0	1/1:0,13:13:24.08:383,24,0	1/1:0,14:14:36.12:574,36,0	1/1:0,21:21:54.18:860,54,0	1/1:0,14:14:33.11:526,33,0	1/1:0,17:17:48.16:766,48,0	1/1:0,24:23:69.15:1024,69,0	1/1:0,33:33:84.23:1313,84,0	1/1:0,17:17:48.16:766,48,0
chr10	88704452	.	C	CAAA	7113.58	PASS	AB=0.568;AC=31;AF=0.554;AN=56;BaseQRankSum=8.860;DP=627;FS=5.381;HRun=10;HaplotypeScore=104.2725;InbreedingCoeff=0.9102;MQ=71.50;MQ0=1;MQRankSum=0.556;QD=18.67;ReadPosRankSum=-0.655;VQSLOD=2.9646;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:24:50.92:0,51,552	0/0:16,0:16:48.15:0,48,584	0/0:15,0:19:29.69:0,30,287	0/0:11,0:10:11.83:0,12,109	1/1:4,1:36:51.38:629,51,0	1/1:3,1:15:29.91:263,30,0	1/1:2,0:8:7.22:49,7,0	0/0:38,0:40:61.73:0,62,1055	0/0:26,0:26:56.61:0,57,649	0/0:21,0:21:48.10:0,48,572	0/0:35,0:36:83.13:0,83,999	1/1:4,0:21:44.83:343,45,0	1/1:1,0:18:34.12:255,34,0	1/1:6,0:18:28.05:216,28,0	1/1:4,0:26:61.02:461,61,0	1/1:4,0:22:18.56:353,19,0	0/0:18,0:19:37.78:0,38,486	0/1:5,0:21:5.52:195,0,6	1/1:10,8:21:47.98:614,48,0	1/1:3,29:42:99:1598,114,0	0/0:11,0:11:30.06:0,30,365	1/1:5,1:20:37.07:271,37,0	1/1:4,1:27:6.25:299,6,0	1/1:5,1:20:34.14:289,34,0	1/1:8,1:37:72.63:584,73,0	0/0:16,0:17:39.01:0,39,456	1/1:5,18:26:42.08:694,42,0	0/0:5,0:5:15.05:0,15,182
chr10	88704707	.	C	CT	14356.66	PASS	AB=0.602;AC=50;AF=0.893;AN=56;BaseQRankSum=-1.957;DP=686;FS=3.776;HRun=9;HaplotypeScore=134.0097;InbreedingCoeff=0.5753;MQ=68.17;MQ0=0;MQRankSum=-6.097;QD=21.89;ReadPosRankSum=1.007;VQSLOD=3.5443;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,16:25:31.10:569,31,0	1/1:2,1:9:25.89:158,26,0	0/0:16,0:16:4.39:0,4,94	0/0:14,0:14:9.61:0,10,209	1/1:4,27:31:69.17:752,69,0	1/1:4,20:24:66.17:722,66,0	1/1:6,24:31:55.02:806,55,0	1/1:12,0:33:54.34:353,54,0	1/1:3,26:30:74.26:856,74,0	1/1:5,1:28:74.09:385,74,0	1/1:4,0:24:57.57:342,58,0	1/1:3,23:27:78.02:826,78,0	1/1:7,19:27:33.16:623,33,0	1/1:5,18:23:60.14:652,60,0	1/1:8,19:27:60.15:654,60,0	1/1:6,22:28:72.18:788,72,0	1/1:9,0:23:49.07:298,49,0	0/1:7,12:18:3.99:408,0,4	0/1:4,9:13:13.43:295,0,13	1/1:11,19:30:40.12:657,40,0	1/1:10,0:23:46.73:249,47,0	1/1:7,21:28:51.14:564,51,0	1/1:0,28:28:66.13:716,66,0	1/1:8,12:18:35.93:379,36,0	1/1:5,25:30:52.15:803,52,0	1/1:5,2:20:51.74:310,52,0	1/1:12,24:36:70.21:968,70,0	1/1:1,0:14:40.08:221,40,0
chr10	88704735	.	A	AG	6091.35	PASS	AB=0.988;AC=35;AF=0.625;AN=56;BaseQRankSum=1.681;DP=683;FS=4.834;HRun=3;HaplotypeScore=153.5424;InbreedingCoeff=-0.2722;MQ=71.16;MQ0=0;MQRankSum=-5.478;QD=9.52;ReadPosRankSum=11.393;VQSLOD=0.8755;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:19:43.20:131,0,43	1/1:10,0:10:28.69:163,29,0	0/0:26,0:26:75.17:0,75,849	0/0:17,0:17:40.68:0,41,493	0/1:34,0:34:58.69:316,0,59	1/1:27,2:29:37.56:397,38,0	0/1:31,0:31:58.70:248,0,59	0/1:28,0:27:11.10:171,0,11	0/1:31,0:31:24.32:337,0,24	0/1:33,0:33:39.18:269,0,39	0/1:23,0:23:5.45:205,0,5	0/1:24,0:24:3.59:267,0,4	1/1:28,0:28:5.66:291,6,0	1/1:23,0:23:14.39:286,14,0	1/1:26,0:26:7.01:275,7,0	1/1:29,0:29:2.47:307,2,0	1/1:27,0:27:28.12:252,28,0	0/1:14,0:13:16.76:109,0,17	1/1:10,0:10:2.89:100,3,0	0/1:23,1:24:28.59:192,0,29	0/1:24,0:23:53.64:138,0,54	0/1:18,1:19:4.88:202,0,5	0/1:24,2:26:14.01:250,0,14	0/1:21,0:19:4.82:124,0,5	0/1:26,1:27:13.37:254,0,13	0/1:22,0:22:2.27:194,0,2	0/1:36,0:36:27.15:398,0,27	1/1:20,0:20:23.38:218,23,0
chr10	88704738	.	G	GA	17858.14	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.646;DP=685;FS=0.000;HRun=6;HaplotypeScore=117.8770;InbreedingCoeff=0.9988;MQ=73.09;MQ0=0;MQRankSum=-9.836;QD=27.95;ReadPosRankSum=4.940;VQSLOD=3.8036;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,15:18:34.65:405,35,0	1/1:0,11:11:30.10:377,30,0	0/0:28,0:28:77.98:0,78,757	0/0:18,0:18:44.97:0,45,439	1/1:9,25:34:63.20:790,63,0	1/1:6,24:30:81.23:980,81,0	1/1:8,22:30:69.16:835,69,0	1/1:5,22:27:69.19:832,69,0	1/1:4,28:32:75.24:943,75,0	1/1:9,24:33:75.23:930,75,0	1/1:7,16:23:42.13:528,42,0	1/1:5,19:24:63.18:768,63,0	1/1:4,24:28:72.22:894,72,0	1/1:1,20:21:57.18:716,57,0	1/1:4,21:25:63.19:780,63,0	1/1:5,23:28:72.22:894,72,0	1/1:4,22:26:60.17:739,60,0	1/1:2,11:12:30.10:377,30,0	1/1:2,9:11:27.07:327,27,0	1/1:8,17:26:60.05:679,60,0	1/1:5,18:22:39.12:491,39,0	1/1:11,9:20:42.04:460,42,0	1/1:16,11:27:51.05:583,51,0	1/1:3,19:20:42.02:491,42,0	1/1:8,17:25:54.15:654,54,0	1/1:7,16:23:51.16:630,51,0	1/1:5,30:36:87.28:1092,87,0	1/1:3,17:20:54.16:665,54,0
chr10	88705491	.	AC	A	12917.64	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=7.951;DP=411;FS=0.000;HRun=2;HaplotypeScore=156.9834;InbreedingCoeff=0.9615;MQ=72.53;MQ0=5;MQRankSum=-8.100;QD=34.45;ReadPosRankSum=6.386;VQSLOD=3.9063;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:30.10:389,30,0	1/1:0,4:4:12.04:156,12,0	0/0:17,0:17:48.12:0,48,635	0/0:19,0:19:48.03:0,48,615	1/1:0,21:20:51.17:661,51,0	1/1:0,9:9:27.09:351,27,0	1/1:0,13:13:39.12:491,39,0	1/1:0,20:15:45.15:580,45,0	1/1:0,15:15:45.14:568,45,0	1/1:2,14:16:45.13:568,45,0	1/1:1,16:17:44.92:609,45,0	1/1:0,13:12:36.12:467,36,0	1/1:0,14:14:42.14:543,42,0	1/1:0,10:10:30.10:388,30,0	1/1:0,13:13:30.10:389,30,0	1/1:0,14:13:39.13:506,39,0	1/1:0,19:19:54.17:696,54,0	1/1:0,27:27:75.24:973,75,0	1/1:1,8:7:21.07:271,21,0	1/1:0,14:14:33.11:428,33,0	1/1:0,5:5:12.04:156,12,0	1/1:0,13:12:33.11:424,33,0	1/1:0,17:16:48.16:623,48,0	1/1:0,12:12:36.12:467,36,0	1/1:0,13:13:36.12:467,36,0	1/1:0,23:23:60.20:779,60,0	1/1:0,21:21:57.19:739,57,0	1/1:0,7:7:18.06:230,18,0
chr10	88706084	.	AGGCTGGCAGCAGCAT	A	715.22	PASS	AB=0.909;AC=11;AF=0.212;AN=52;BaseQRankSum=5.577;DP=608;FS=0.000;HRun=0;HaplotypeScore=168.1943;InbreedingCoeff=0.6794;MQ=23.14;MQ0=218;MQRankSum=-1.077;QD=6.27;ReadPosRankSum=-0.964;VQSLOD=2.4011;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:21:18.06:0,18,746	1/1:10,4:10:2.84:14,3,0	./.	./.	0/0:15,0:13:10.02:0,10,285	0/0:18,0:12:12.04:0,12,649	0/0:35,0:23:26.89:0,27,956	0/0:22,0:18:21.07:0,21,622	0/0:17,0:15:24.03:0,24,1028	1/1:21,8:16:14.93:218,15,0	1/1:5,5:6:5.93:84,6,0	0/0:27,0:15:30.10:0,30,1167	0/0:18,0:15:33.11:0,33,1790	0/0:20,0:16:26.25:0,26,1235	0/0:10,0:4:9.03:0,9,516	0/0:16,0:10:18.06:0,18,898	0/1:27,3:17:99:239,0,256	0/0:30,0:17:35.69:0,36,1924	0/0:17,0:15:33.08:0,33,1395	0/0:22,0:15:14.81:0,15,551	0/0:56,1:12:9.03:0,9,245	0/0:22,0:20:18.02:0,18,635	0/0:23,0:17:15.05:0,15,477	0/0:54,0:30:57.20:0,57,3021	0/0:30,0:21:30.10:0,30,1298	1/1:10,9:7:9.01:180,9,0	0/0:9,0:4:6.02:0,6,277	1/1:11,1:4:3.01:127,3,0
chr10	88706119	.	TACA	T	910.76	PASS	AB=0.765;AC=9;AF=0.173;AN=52;BaseQRankSum=-4.781;DP=459;FS=3.829;HRun=0;HaplotypeScore=87.8500;InbreedingCoeff=-0.0077;MQ=23.58;MQ0=144;MQRankSum=0.811;QD=4.79;ReadPosRankSum=-3.304;VQSLOD=1.2909;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,7:10:27.45:27,0,121	0/0:8,0:6:6.02:0,6,130	./.	./.	0/0:13,0:12:12.38:0,12,126	0/0:13,0:8:12.04:0,12,260	0/1:16,5:17:55.93:56,0,678	0/0:12,1:5:15.05:0,15,328	0/1:9,2:9:73.10:73,0,260	0/0:18,0:13:33.01:0,33,692	0/0:10,0:8:12.38:0,12,126	0/0:19,1:13:33.11:0,33,719	0/0:18,0:15:39.13:0,39,850	0/1:14,4:13:74.03:74,0,305	0/0:7,1:4:6.02:0,6,131	0/0:12,0:8:21.07:0,21,458	0/1:11,12:15:60.45:162,0,60	0/1:15,7:14:23.61:24,0,430	0/0:7,0:7:18.06:0,18,392	0/0:11,0:9:12:0,12,214	1/1:16,25:16:27.05:400,27,0	0/0:15,0:14:24:0,24,431	0/0:19,1:18:26.90:0,27,492	0/1:24,12:23:99:235,0,418	0/0:26,0:25:57.20:0,57,1239	0/0:15,0:8:24.07:0,24,486	0/0:5,0:2:3.01:0,3,65	0/0:8,0:2:3.01:0,3,54
chr10	88706238	.	T	TG	3411.22	PASS	AC=48;AF=0.923;AN=52;BaseQRankSum=8.086;DP=212;FS=40.962;HRun=0;HaplotypeScore=60.5571;InbreedingCoeff=0.3992;MQ=84.47;MQ0=1;MQRankSum=-8.316;QD=21.45;ReadPosRankSum=-0.616;VQSLOD=1.4341;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,7:7:6.02:96,6,0	./.	0/0:25,0:25:69.22:0,69,950	0/0:25,0:25:27.31:0,27,827	1/1:2,7:9:9.03:143,9,0	1/1:1,6:7:15.05:239,15,0	1/1:2,10:3:3.01:41,3,0	1/1:2,13:11:33.11:516,33,0	1/1:1,2:3:3.01:48,3,0	1/1:1,8:6:18.06:281,18,0	1/1:2,4:5:3.01:48,3,0	1/1:1,7:8:15.05:224,15,0	./.	1/1:0,7:7:12.04:191,12,0	1/1:1,8:9:15.05:239,15,0	1/1:0,3:3:6.02:96,6,0	1/1:0,4:4:6.02:96,6,0	1/1:2,0:2:2.99:24,3,0	1/1:0,4:2:6.02:96,6,0	1/1:0,9:6:9.03:143,9,0	1/1:0,1:1:3.01:36,3,0	1/1:0,12:10:18.06:286,18,0	1/1:0,8:6:9.03:143,9,0	1/1:1,3:4:6.02:96,6,0	1/1:1,5:6:6.02:96,6,0	1/1:1,3:2:3.01:48,3,0	1/1:1,3:4:6.02:93,6,0	1/1:2,3:4:6.02:96,6,0
chr10	88708300	.	TAGACAGACAGACAGACAGAC	T	28026.43	PASS	AB=0.687;AC=45;AF=0.804;AN=56;BaseQRankSum=8.495;DP=611;FS=1.219;HRun=0;HaplotypeScore=330.1473;InbreedingCoeff=0.3816;MQ=50.47;MQ0=3;MQRankSum=-5.872;QD=52.98;ReadPosRankSum=4.193;VQSLOD=3.5379;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,7:16:6.02:291,6,0	0/1:5,0:15:68.65:412,0,69	0/0:24,0:20:27.09:0,27,1468	0/0:32,0:28:39.12:0,39,1903	1/1:11,12:21:26.95:874,27,0	1/1:7,13:20:30.10:1511,30,0	1/1:15,9:23:12.04:583,12,0	0/0:26,0:24:33.09:0,33,556	1/1:6,12:18:24.08:1258,24,0	1/1:10,0:19:27.09:532,27,0	0/1:5,0:12:99:238,0,141	1/1:2,15:17:42.14:2047,42,0	1/1:10,25:34:54.19:2645,54,0	1/1:8,13:21:33.11:1591,33,0	1/1:11,15:26:33.74:1800,34,0	1/1:13,14:27:36.12:1749,36,0	0/1:10,0:15:97.39:250,0,97	1/1:4,4:8:6.02:323,6,0	1/1:8,6:14:18.06:745,18,0	1/1:8,22:23:45.08:1775,45,0	0/1:19,0:24:41.15:41,0,79	1/1:11,22:33:60.21:2960,60,0	1/1:12,14:26:29.82:1195,30,0	1/1:6,7:13:6.37:178,6,0	1/1:11,19:28:42.14:2117,42,0	0/1:16,0:29:99:600,0,218	1/1:5,18:23:39.61:2085,40,0	1/1:1,0:5:12.04:227,12,0
chr10	88709648	.	A	ACTATCTAT	6971.40	PASS	AB=0.792;AC=36;AF=0.692;AN=52;BaseQRankSum=2.465;DP=722;FS=0.000;HRun=0;HaplotypeScore=223.4977;InbreedingCoeff=0.6043;MQ=70.80;MQ0=6;MQRankSum=-4.866;QD=13.03;ReadPosRankSum=-3.313;VQSLOD=3.0080;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,3:23:0.47:1,0,0	0/0:8,0:8:12.04:0,12,296	./.	./.	1/1:16,0:42:59.70:489,60,0	1/1:13,15:28:21.07:851,21,0	1/1:9,0:14:8.69:160,9,0	1/1:36,0:35:23.90:213,24,0	1/1:8,7:15:12.04:484,12,0	0/0:34,0:35:42.14:0,42,1018	0/0:25,0:25:9.03:0,9,222	1/1:17,10:27:18.06:729,18,0	1/1:16,0:20:8.06:214,8,0	1/1:13,10:25:21.05:750,21,0	1/1:23,2:34:19.62:628,20,0	1/1:11,10:21:18.06:730,18,0	0/1:21,0:24:83.04:83,0,557	1/1:8,0:19:22.78:182,23,0	1/1:17,0:28:32.94:271,33,0	0/1:21,0:36:35.01:212,0,35	0/0:19,0:19:36.12:0,36,855	1/1:13,11:24:9.03:365,9,0	1/1:20,0:25:3.74:10,4,0	0/1:17,5:24:0:0,0,1	0/1:26,0:36:99:120,0,611	0/0:9,0:20:34.27:0,34,569	1/1:10,0:31:59.79:480,60,0	0/0:27,0:27:33.11:0,33,814
chr10	88710369	.	TACA	T	9102.79	PASS	AC=50;AF=0.962;AN=52;DP=557;FS=0.000;HRun=0;HaplotypeScore=99.6784;InbreedingCoeff=0.3123;MQ=25.12;MQ0=172;QD=17.57;VQSLOD=4.1884;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:22:32.98:440,33,0	1/1:4,7:8:18.02:257,18,0	./.	./.	1/1:0,13:13:2.74:36,3,0	1/1:1,14:12:20.74:320,21,0	1/1:8,22:20:41.99:590,42,0	1/1:3,11:11:30.10:475,30,0	1/1:10,16:20:30.10:475,30,0	1/1:4,16:18:39.13:617,39,0	0/0:6,4:7:0:0,0,0	1/1:6,29:27:48.16:749,48,0	1/1:10,18:18:26.81:418,27,0	1/1:10,25:28:54.13:855,54,0	1/1:6,25:26:24.08:381,24,0	1/1:1,16:16:29.74:475,30,0	1/1:11,12:13:15.05:238,15,0	1/1:11,14:10:15.05:238,15,0	1/1:5,11:8:15.05:238,15,0	1/1:1,9:10:23.83:206,24,0	1/1:14,22:7:8.91:87,9,0	1/1:1,12:13:23.91:270,24,0	1/1:0,7:7:9.03:132,9,0	1/1:10,11:7:8.99:115,9,0	1/1:2,10:12:15.01:210,15,0	1/1:1,20:20:53.79:854,54,0	1/1:5,12:9:17.93:285,18,0	1/1:1,7:5:9.03:143,9,0
chr10	88710452	.	GC	G	10685.99	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.042;DP=473;FS=3.691;HRun=4;HaplotypeScore=47.6247;InbreedingCoeff=0.8433;MQ=50.62;MQ0=8;MQRankSum=2.271;QD=24.51;ReadPosRankSum=5.271;VQSLOD=3.5784;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:32:75.23:900,75,0	1/1:0,12:10:30.09:360,30,0	0/0:19,0:16:39.87:0,40,546	0/0:18,0:17:39.12:0,39,513	1/1:1,10:6:14.58:180,15,0	1/1:0,10:10:21.06:252,21,0	1/1:1,17:14:33.10:396,33,0	1/1:1,10:1:3.01:36,3,0	1/1:1,26:27:63.19:756,63,0	1/1:1,15:13:36.11:432,36,0	1/1:0,7:4:12.04:144,12,0	1/1:1,29:24:66.20:791,66,0	1/1:1,24:18:45.14:539,45,0	1/1:4,16:18:51.04:564,51,0	1/1:1,22:20:48.09:559,48,0	1/1:2,16:16:39.12:468,39,0	1/1:0,17:16:36.07:416,36,0	1/1:0,10:8:21.06:252,21,0	1/1:0,8:6:18.04:205,18,0	1/1:2,10:10:24.07:288,24,0	1/1:1,22:22:57.17:684,57,0	1/1:1,16:13:33.07:381,33,0	1/1:0,9:5:5.98:72,6,0	1/1:0,15:15:39.12:468,39,0	1/1:0,21:17:45.14:540,45,0	1/1:1,10:10:24.07:288,24,0	1/1:2,17:14:30.09:360,30,0	1/1:0,12:10:30.09:360,30,0
chr10	88711454	.	C	CG	29714.79	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.405;DP=784;FS=0.000;HRun=1;HaplotypeScore=75.6953;InbreedingCoeff=0.9992;MQ=78.19;MQ0=0;MQRankSum=-10.731;QD=40.26;ReadPosRankSum=6.721;VQSLOD=4.6136;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:99:1526,102,0	1/1:0,9:9:27.09:404,27,0	0/0:25,0:25:68.25:0,68,855	0/0:21,0:21:63.20:0,63,805	1/1:0,26:26:78.22:1143,78,0	1/1:0,31:31:90.30:1347,90,0	1/1:1,24:25:65.96:952,66,0	1/1:2,32:34:99:1383,99,0	1/1:1,30:31:81.27:1212,81,0	1/1:0,38:38:99:1700,114,0	1/1:0,29:29:75.25:1123,75,0	1/1:0,26:26:63.21:943,63,0	1/1:0,30:30:78.26:1167,78,0	1/1:1,33:35:99:1518,102,0	1/1:2,31:33:81.27:1212,81,0	1/1:0,32:32:81.27:1213,81,0	1/1:1,14:15:32.21:533,32,0	1/1:0,18:18:51.17:755,51,0	1/1:2,22:24:69.21:1010,69,0	1/1:1,31:32:78.22:1139,78,0	1/1:0,42:42:99:1662,111,0	1/1:0,25:25:66.22:989,66,0	1/1:1,27:28:72.24:1078,72,0	1/1:0,27:27:72.24:1079,72,0	1/1:1,26:27:66.22:988,66,0	1/1:2,30:32:90.30:1347,90,0	1/1:0,42:41:99:1751,117,0	1/1:0,12:12:36.12:539,36,0
chr10	88712100	.	T	TG	17123.07	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.628;DP=480;FS=5.691;HRun=0;HaplotypeScore=233.5436;InbreedingCoeff=0.8019;MQ=72.16;MQ0=0;MQRankSum=-8.364;QD=38.14;ReadPosRankSum=5.926;VQSLOD=3.5433;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:29.95:475,30,0	1/1:1,7:8:14.70:238,15,0	0/0:20,0:20:54.18:0,54,746	0/0:11,0:11:33.08:0,33,417	1/1:0,28:28:50.28:895,50,0	1/1:2,18:20:48.16:761,48,0	1/1:0,6:6:9.03:142,9,0	1/1:0,20:20:60.20:956,60,0	1/1:2,20:22:63.21:999,63,0	1/1:2,17:19:51.17:811,51,0	1/1:1,19:20:57.19:898,57,0	1/1:2,14:16:36.54:592,37,0	1/1:0,24:24:60.20:951,60,0	1/1:0,16:16:30.10:477,30,0	1/1:0,24:24:60.20:949,60,0	1/1:0,14:14:27.09:428,27,0	1/1:2,5:7:15.02:212,15,0	1/1:0,8:8:15.05:239,15,0	1/1:3,16:19:54.18:858,54,0	1/1:0,22:22:51.17:810,51,0	1/1:0,4:4:6.02:95,6,0	1/1:0,22:22:54.18:858,54,0	1/1:0,12:15:36.12:571,36,0	1/1:1,6:7:0.74:132,1,0	1/1:2,22:24:60.19:930,60,0	1/1:0,25:25:75.26:1188,75,0	1/1:1,31:32:87.29:1372,87,0	1/1:2,6:8:18.05:286,18,0
chr10	88712103	.	T	TAACAGAATCACCC	91329.36	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.763;DP=645;FS=0.724;HRun=0;HaplotypeScore=287.6295;InbreedingCoeff=0.9857;MQ=62.93;MQ0=0;MQRankSum=-8.937;QD=148.50;ReadPosRankSum=4.132;VQSLOD=4.9758;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,6:26:63.17:3394,63,0	1/1:8,3:11:30.06:1408,30,0	0/0:20,0:20:56.66:0,57,1848	0/0:10,0:10:27.09:0,27,994	1/1:14,15:31:72.15:3472,72,0	1/1:14,13:27:72.25:4102,72,0	1/1:12,3:15:39.05:1846,39,0	1/1:31,2:33:99:5326,99,0	1/1:8,16:24:72.24:4236,72,0	1/1:13,11:25:75.24:4213,75,0	1/1:14,13:28:72.25:4206,72,0	1/1:13,9:22:63.22:3408,63,0	1/1:16,16:33:96.29:5551,96,0	1/1:15,6:22:66.23:3478,66,0	1/1:13,14:28:84.25:4571,84,0	1/1:12,7:20:57.20:3104,57,0	1/1:5,4:9:24.08:1394,24,0	1/1:6,2:8:15.05:878,15,0	1/1:16,6:22:57.19:2603,57,0	1/1:20,10:31:84.26:4178,84,0	1/1:6,2:8:18.06:1199,18,0	1/1:16,11:29:72.24:3943,72,0	1/1:15,11:27:66.18:3602,66,0	1/1:10,4:14:30.02:1489,30,0	1/1:22,11:32:93.29:5047,93,0	1/1:19,15:34:99:5957,99,0	1/1:23,19:43:99:6969,123,0	1/1:9,3:12:36.07:1752,36,0
chr10	88712585	.	AGG	A	31808.54	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=7.772;DP=786;FS=4.490;HRun=2;HaplotypeScore=132.4945;InbreedingCoeff=0.9958;MQ=82.53;MQ0=1;MQRankSum=-10.779;QD=44.24;ReadPosRankSum=8.460;VQSLOD=4.1987;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:69.23:1124,69,0	1/1:0,9:8:18.06:294,18,0	0/0:37,0:37:99:0,102,1961	0/0:30,0:30:87.30:0,87,1729	1/1:0,31:31:84.29:1370,84,0	1/1:0,25:25:69.24:1125,69,0	1/1:0,25:25:72.25:1174,72,0	1/1:0,35:35:99:1552,99,0	1/1:0,28:28:69.24:1125,69,0	1/1:0,33:33:99:1580,99,0	1/1:0,30:30:84.25:1341,84,0	1/1:1,21:22:57.19:917,57,0	1/1:0,24:24:66.23:1076,66,0	1/1:1,23:24:63.22:1028,63,0	1/1:0,42:42:99:1810,111,0	1/1:0,28:28:81.28:1321,81,0	1/1:1,36:37:35.62:1456,36,0	1/1:0,17:17:51.17:831,51,0	1/1:1,23:23:69.24:1125,69,0	1/1:0,36:36:99:1663,102,0	1/1:0,36:36:90.31:1468,90,0	1/1:0,31:31:87.30:1419,87,0	1/1:0,23:23:63.22:1027,63,0	1/1:0,23:23:66.23:1076,66,0	1/1:0,32:32:87.30:1419,87,0	1/1:0,25:25:75.24:1194,75,0	1/1:0,37:37:99:1659,102,0	1/1:0,13:13:39.13:636,39,0
chr10	88713716	.	T	TG	27985.62	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.624;DP=809;FS=0.000;HRun=1;HaplotypeScore=65.5605;InbreedingCoeff=0.9991;MQ=60.80;MQ0=13;MQRankSum=0.184;QD=37.51;ReadPosRankSum=5.418;VQSLOD=5.0137;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:93.32:1393,93,0	1/1:0,11:11:30.02:421,30,0	0/0:37,0:18:41.11:0,41,462	0/0:26,0:11:31.30:0,31,332	1/1:1,30:29:65.97:884,66,0	1/1:0,26:26:60.20:898,60,0	1/1:0,17:17:39.13:585,39,0	1/1:4,42:46:99:1810,126,0	1/1:0,25:25:66.22:989,66,0	1/1:0,36:35:99:1525,102,0	1/1:1,18:18:42.14:628,42,0	1/1:1,30:31:75.25:1124,75,0	1/1:2,44:46:99:1843,123,0	1/1:0,22:22:66.22:988,66,0	1/1:2,46:48:99:1753,117,0	1/1:2,33:35:90.30:1349,90,0	1/1:0,19:19:57.19:847,57,0	1/1:0,14:13:33.06:468,33,0	1/1:4,19:19:45.14:654,45,0	1/1:1,36:30:81.27:1213,81,0	1/1:0,14:14:33.11:495,33,0	1/1:0,42:41:99:1454,99,0	1/1:0,16:15:39.13:575,39,0	1/1:0,29:29:81.27:1214,81,0	1/1:1,39:38:99:1483,99,0	1/1:0,39:37:99:1618,108,0	1/1:3,26:29:75.25:1104,75,0	1/1:0,17:17:45.15:669,45,0
chr10	88714869	.	G	GCAGA	19971.05	PASS	AB=0.615;AC=45;AF=0.833;AN=54;BaseQRankSum=6.106;DP=862;FS=0.000;HRun=0;HaplotypeScore=215.1689;InbreedingCoeff=0.7633;MQ=58.49;MQ0=4;MQRankSum=-2.719;QD=27.85;ReadPosRankSum=2.041;VQSLOD=4.1822;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:69.21:0,69,1064	1/1:6,0:16:24.08:418,24,0	0/0:18,0:17:14.23:0,14,282	0/0:32,0:30:55.66:0,56,868	1/1:21,0:42:15.05:262,15,0	1/1:16,0:34:27.09:472,27,0	./.	1/1:24,1:36:39.09:630,39,0	0/0:28,0:28:54.16:0,54,823	1/1:15,2:40:69.15:1078,69,0	1/1:8,2:22:21.07:377,21,0	1/1:19,0:33:18.06:313,18,0	1/1:4,35:40:96.13:2330,96,0	1/1:15,0:35:30.10:523,30,0	1/1:10,29:43:84.29:2043,84,0	1/1:11,29:45:75.26:1807,75,0	1/1:6,1:15:5.85:92,6,0	1/1:13,0:13:9.03:140,9,0	1/1:12,7:20:27.08:568,27,0	0/1:12,20:32:86.69:1110,0,87	1/1:15,1:26:2.04:6,2,0	1/1:9,0:32:30.07:492,30,0	1/1:9,20:30:54.19:1313,54,0	1/1:6,22:30:60.21:1460,60,0	1/1:11,22:35:54.19:1314,54,0	1/1:18,0:45:81.25:1336,81,0	1/1:15,26:42:75.26:1817,75,0	1/1:5,0:5:6.02:71,6,0
chr10	88715300	.	AC	A	1085.85	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.818;DP=606;FS=3.355;HRun=2;HaplotypeScore=106.7134;InbreedingCoeff=0.9903;MQ=71.47;MQ0=0;MQRankSum=0.654;QD=32.90;ReadPosRankSum=1.024;VQSLOD=3.4089;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:48.16:623,48,0	0/0:11,0:11:33.11:0,33,493	0/0:19,0:19:57.17:0,57,806	0/0:6,0:6:15.05:0,15,222	0/0:26,0:25:75.25:0,75,1119	0/0:19,0:19:54.18:0,54,808	0/0:10,0:10:30.10:0,30,450	0/0:28,0:28:81.27:0,81,1214	1/1:0,16:16:45.15:584,45,0	0/0:27,0:27:81.27:0,81,1214	0/0:28,0:28:81.27:0,81,1214	0/0:22,0:22:66.21:0,66,968	0/0:36,0:36:99:0,108,1613	0/0:9,0:9:27.09:0,27,405	0/0:25,0:25:69.21:0,69,993	0/0:17,0:17:51.17:0,51,762	0/0:29,0:29:84.28:0,84,1256	0/0:12,0:12:33.06:0,33,472	0/0:19,0:18:54.17:0,54,791	0/0:42,0:42:99:0,126,1847	0/0:17,0:17:51.14:0,51,723	0/0:22,0:22:60.20:0,60,899	0/0:32,0:32:96.31:0,96,1417	0/0:9,0:9:27.09:0,27,403	0/0:44,0:44:99:0,132,1920	0/0:25,0:25:69.22:0,69,988	0/0:25,0:25:72.23:0,72,1056	0/0:14,0:14:42.12:0,42,606
chr10	88715642	.	A	AG	19675.43	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-9.388;DP=672;FS=2.123;HRun=4;HaplotypeScore=100.9969;InbreedingCoeff=0.9908;MQ=76.26;MQ0=2;MQRankSum=-4.746;QD=34.34;ReadPosRankSum=3.582;VQSLOD=4.8747;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.27:0,96,1087	1/1:1,8:9:24.08:328,24,0	0/0:29,0:25:50.31:0,50,517	0/0:19,0:16:33.75:0,34,367	1/1:3,24:27:60.19:804,60,0	1/1:1,17:18:42.14:565,42,0	1/1:5,16:21:54.14:711,54,0	1/1:3,24:27:72.23:967,72,0	0/0:15,0:15:36.10:0,36,408	1/1:1,30:31:84.26:1131,84,0	1/1:1,32:33:84.28:1149,84,0	1/1:1,19:20:57.19:779,57,0	1/1:3,27:30:81.27:1103,81,0	1/1:4,11:15:39.03:473,39,0	1/1:3,29:32:81.27:1108,81,0	1/1:4,30:34:78.26:1067,78,0	1/1:2,19:21:54.18:739,54,0	1/1:1,4:5:12.04:164,12,0	1/1:1,27:27:78.22:1030,78,0	1/1:1,25:26:69.19:922,69,0	1/1:4,19:23:57.19:780,57,0	1/1:6,17:23:57.15:730,57,0	1/1:7,22:29:57.15:758,57,0	1/1:2,15:17:45.15:616,45,0	1/1:1,28:29:81.27:1108,81,0	1/1:0,25:25:75.25:1025,75,0	1/1:4,21:23:54.14:717,54,0	1/1:2,23:25:66.22:903,66,0
chr10	88715666	.	CT	C	3142.86	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=3.621;DP=683;FS=4.799;HRun=10;HaplotypeScore=154.6977;InbreedingCoeff=0.9604;MQ=70.69;MQ0=2;MQRankSum=-8.845;QD=20.54;ReadPosRankSum=-0.669;VQSLOD=2.1820;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:39:80.27:0,80,412	0/0:9,0:9:18.05:0,18,199	0/0:30,0:27:45.03:0,45,473	0/0:16,0:12:20.38:0,20,207	1/1:2,32:33:77.43:614,77,0	1/1:1,24:25:68.99:598,69,0	1/1:2,24:26:65.83:555,66,0	0/0:24,0:24:54.15:0,54,597	0/0:1,0:17:34.33:0,34,173	0/0:28,0:28:56.19:0,56,650	0/0:33,1:34:61.16:0,61,886	1/1:0,18:18:53.95:461,54,0	0/0:35,0:35:87.22:0,87,951	1/1:1,15:16:41.93:357,42,0	0/0:29,1:30:49.14:0,49,763	0/0:27,0:27:69.10:0,69,747	0/0:26,1:27:72.13:0,72,771	1/1:0,7:7:18:156,18,0	0/0:22,2:24:2.12:0,2,479	0/0:34,0:34:95.83:0,96,1023	0/0:17,0:17:51.13:0,51,557	1/1:2,25:27:71.76:599,72,0	0/0:24,1:25:37.06:0,37,613	0/0:19,0:19:54.13:0,54,588	0/0:28,0:28:75.14:0,75,794	0/0:25,1:26:43.10:0,43,685	0/0:31,0:30:72.18:0,72,786	0/0:10,0:10:27.07:0,27,299
chr10	88715879	.	T	TCAGA	1487.65	PASS	AB=0.756;AC=3;AF=0.054;AN=56;BaseQRankSum=2.416;DP=651;FS=5.831;HRun=0;HaplotypeScore=183.0185;InbreedingCoeff=-0.0763;MQ=56.27;MQ0=0;MQRankSum=-4.176;QD=21.88;ReadPosRankSum=-0.803;VQSLOD=2.7741;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,12:24:99:616,0,199	0/0:10,0:10:5.10:0,5,302	0/0:30,0:26:75.24:0,75,1449	0/0:24,0:23:69.20:0,69,1290	0/0:20,0:20:1.20:0,1,564	0/0:30,0:30:87.28:0,87,1202	0/0:33,0:33:84.64:0,85,1077	0/0:23,0:23:60.18:0,60,771	0/1:8,20:25:99:953,0,109	0/0:22,0:22:37.09:0,37,804	0/0:13,0:13:33.10:0,33,439	0/0:22,0:22:66.22:0,66,897	0/0:27,0:27:57.28:0,57,1050	0/0:25,0:25:24.09:0,24,862	0/0:30,0:30:87.28:0,87,1151	0/0:22,1:23:3.43:0,3,797	0/0:28,0:28:84.27:0,84,1110	0/0:16,0:15:45.15:0,45,601	0/1:14,0:14:17.80:18,0,323	0/0:29,0:29:56.28:0,56,1028	0/0:25,0:25:50.27:0,50,954	0/0:16,0:16:48.16:0,48,684	0/0:20,0:20:54.69:0,55,770	0/0:25,0:25:72.17:0,72,951	0/0:11,0:11:33.11:0,33,440	0/0:33,0:32:99:0,99,1355	0/0:27,0:27:59.28:0,59,1078	0/0:20,0:20:60.20:0,60,828
chr10	88715880	.	T	TTC	678.52	PASS	AB=0.625;AC=2;AF=0.036;AN=56;BaseQRankSum=6.618;DP=641;FS=1.252;HRun=0;HaplotypeScore=156.6995;InbreedingCoeff=-0.0448;MQ=56.14;MQ0=0;MQRankSum=-6.278;QD=13.05;ReadPosRankSum=-1.911;VQSLOD=2.9734;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,12:22:99:252,0,135	0/0:8,0:8:23.81:0,24,177	0/0:31,0:27:68.35:0,68,1111	0/0:26,0:24:62.13:0,62,944	0/0:18,0:18:5.63:0,6,298	0/0:30,0:30:83.50:0,84,670	0/0:34,0:34:64.22:0,64,590	0/0:23,0:23:18.82:0,19,345	0/1:8,20:25:44.97:515,0,45	0/0:20,0:20:59.53:0,60,444	0/0:12,0:12:32.85:0,33,260	0/0:22,0:22:65.47:0,65,486	0/0:26,0:26:57.56:0,58,547	0/0:23,0:23:68.61:0,69,531	0/0:30,0:30:85.14:0,85,615	0/0:22,1:23:6.89:0,7,428	0/0:28,0:28:83.21:0,83,590	0/0:16,0:15:41.11:0,41,306	0/0:13,0:13:27.94:0,28,194	0/0:28,0:28:58.56:0,59,546	0/0:25,0:25:71.43:0,71,530	0/0:16,0:16:47.79:0,48,394	0/0:21,0:21:59.57:0,60,447	0/0:25,0:25:54.41:0,54,500	0/0:12,0:12:30.29:0,30,224	0/0:33,0:32:78.22:0,78,716	0/0:26,0:26:53.61:0,54,583	0/0:20,0:20:59.66:0,60,459
chr10	88716350	.	CATCTATGT	C	4477.58	PASS	AB=1.000;AC=29;AF=0.806;AN=36;BaseQRankSum=1.085;DP=677;FS=11.543;HRun=0;HaplotypeScore=163.7222;InbreedingCoeff=0.3763;MQ=51.15;MQ0=6;MQRankSum=0.827;QD=11.66;ReadPosRankSum=-0.862;VQSLOD=3.2222;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:7.26:0,7,174	./.	0/0:12,0:8:9.02:0,9,146	0/0:13,0:9:2.37:0,2,8	./.	./.	1/1:4,14:18:2.74:78,3,0	1/1:39,0:39:90.05:1028,90,0	0/1:20,0:20:40.97:41,0,66	1/1:32,0:31:35.88:463,36,0	./.	./.	1/1:6,20:25:9.03:221,9,0	1/1:27,0:27:3.01:74,3,0	1/1:3,27:30:3:25,3,0	1/1:4,22:26:3.01:71,3,0	1/1:6,15:20:2.97:69,3,0	1/1:12,0:12:6.02:143,6,0	1/1:26,0:25:45.10:847,45,0	./.	1/1:29,0:29:27.05:417,27,0	./.	./.	./.	./.	1/1:27,0:27:54.02:772,54,0	1/1:7,23:27:3.01:79,3,0	1/1:21,0:20:6.02:151,6,0
chr10	88716362	.	TATGTATCTATGC	T	7089.24	PASS	AB=0.598;AC=35;AF=0.700;AN=50;BaseQRankSum=-3.432;DP=610;FS=2.264;HRun=0;HaplotypeScore=144.6440;InbreedingCoeff=0.5193;MQ=48.00;MQ0=8;MQRankSum=1.595;QD=13.98;ReadPosRankSum=2.056;VQSLOD=3.9564;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:17.98:0,18,336	./.	0/0:7,0:3:9.02:0,9,153	0/0:7,0:2:2.37:0,2,8	0/1:4,21:20:0:0,0,0	0/1:2,18:19:0:0,0,0	1/1:17,0:17:1.92:95,2,0	1/1:2,32:34:96.23:1573,96,0	0/0:17,0:16:14.80:0,15,221	1/1:4,25:28:45.14:1078,45,0	0/1:1,27:26:0:0,0,0	0/1:2,20:22:0:0,0,0	1/1:26,0:24:8.77:258,9,0	1/1:5,19:24:3.01:111,3,0	1/1:27,0:27:2.98:21,3,0	1/1:26,0:25:3.01:89,3,0	1/1:18,0:18:2.51:106,3,0	1/1:2,11:13:10.59:266,11,0	1/1:4,17:19:35.11:932,35,0	0/1:6,27:31:0:0,0,0	1/1:31,0:31:29.62:706,30,0	0/1:3,19:19:0:0,0,0	0/1:24,0:23:0:0,0,0	./.	./.	1/1:3,24:27:57.19:1548,57,0	1/1:26,0:23:3.01:98,3,0	1/1:0,14:13:6.02:209,6,0
chr10	88716365	.	GTAT	G	467.28	PASS	AB=0.993;AC=22;AF=0.478;AN=46;BaseQRankSum=4.073;DP=590;FS=0.000;HRun=0;HaplotypeScore=133.2161;InbreedingCoeff=0.0261;MQ=47.35;MQ0=9;MQRankSum=-2.162;QD=1.29;ReadPosRankSum=4.099;VQSLOD=2.3419;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:18.05:0,18,316	./.	0/0:6,0:3:9.03:0,9,144	0/0:7,0:2:3.01:0,3,41	./.	0/1:20,0:19:0:0,0,0	1/1:16,0:16:2.48:19,2,0	0/1:32,0:32:58.15:58,0,548	0/0:17,0:16:15.04:0,15,244	0/1:25,0:24:20.41:20,0,159	0/1:27,0:25:0:0,0,0	0/1:22,0:21:0:0,0,0	1/1:23,3:24:8.38:59,8,0	1/1:21,0:21:2.59:20,3,0	0/0:27,0:27:2.50:0,2,9	1/1:24,2:25:2.72:13,3,0	1/1:17,0:17:2.43:16,2,0	0/1:13,0:13:32.06:32,0,38	0/1:21,0:18:99:152,0,167	0/0:29,2:28:0:0,0,0	0/1:30,0:30:51.49:51,0,141	./.	0/0:21,1:21:3.01:0,3,42	./.	./.	0/1:24,0:24:98.97:99,0,191	0/1:25,2:24:14.32:14,0,48	1/1:14,0:13:5.94:42,6,0
chr10	88716374	.	C	CATCT	170.68	PASS	AB=1.000;AC=8;AF=0.200;AN=40;BaseQRankSum=-1.916;DP=611;FS=5.090;HRun=0;HaplotypeScore=146.3493;InbreedingCoeff=0.1628;MQ=46.99;MQ0=8;MQRankSum=0.703;QD=1.48;ReadPosRankSum=-2.320;VQSLOD=1.4357;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,5:21:12.04:0,12,169	0/0:4,0:4:2.94:0,3,18	1/1:3,0:1:2.74:12,3,0	./.	./.	./.	0/0:14,0:15:2.19:0,2,13	0/0:34,0:33:2.47:0,2,297	0/0:16,0:15:12.04:0,12,186	0/1:26,0:25:17.40:149,0,17	./.	./.	0/0:29,0:27:8.51:0,9,76	0/0:21,0:21:2.88:0,3,15	0/0:29,0:29:3:0,3,29	0/1:30,0:28:0:0,0,0	1/1:19,0:19:5.85:55,6,0	0/1:13,0:13:8.12:8,0,44	0/0:21,0:18:25.35:0,25,313	0/0:35,0:32:0:0,0,0	0/0:27,0:27:4.49:0,4,60	./.	0/0:26,0:25:9.03:0,9,149	./.	./.	0/1:24,0:24:51.84:52,0,70	0/0:32,0:29:11.74:0,12,150	0/0:14,0:13:6.01:0,6,59
chr10	88716382	.	CATGCATGTATGT	C	1073.52	PASS	AB=0.992;AC=22;AF=0.423;AN=52;BaseQRankSum=1.658;DP=613;FS=27.643;HRun=0;HaplotypeScore=176.6674;InbreedingCoeff=0.1125;MQ=46.61;MQ0=15;MQRankSum=-1.407;QD=3.04;ReadPosRankSum=1.671;VQSLOD=1.3800;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:12.04:0,12,361	0/0:5,0:5:9.03:0,9,293	0/1:7,0:2:7.86:8,0,25	./.	1/1:21,4:19:6.02:193,6,0	1/1:17,2:18:9.03:183,9,0	1/1:15,0:13:1.45:15,1,0	0/1:30,0:29:99:230,0,266	0/0:15,0:15:11.83:0,12,410	0/1:27,0:26:8.08:8,0,632	0/0:29,0:26:5.70:0,6,168	0/1:20,2:21:0:0,0,0	0/1:28,0:26:13.75:14,0,258	1/1:20,2:21:3.01:68,3,0	0/0:29,0:29:9.02:0,9,146	0/1:28,0:26:4.93:5,0,45	0/0:21,0:21:5.10:0,5,442	1/1:13,1:13:10.85:224,11,0	0/1:19,0:16:86.41:86,0,223	0/0:36,0:33:5.81:0,6,65	0/0:27,0:26:11.87:0,12,93	1/1:23,2:21:6.02:146,6,0	0/0:25,0:24:14.94:0,15,643	0/0:18,0:18:6.02:0,6,147	./.	0/1:26,0:25:32.47:32,0,242	0/1:30,0:27:6.97:7,0,425	0/1:15,0:14:9.55:10,0,51
chr10	88717071	.	GGTCCTGC	G	814.87	PASS	AB=0.896;AC=12;AF=0.222;AN=54;BaseQRankSum=7.458;DP=680;FS=2.503;HRun=0;HaplotypeScore=235.8562;InbreedingCoeff=-0.1720;MQ=33.97;MQ0=98;MQRankSum=-8.883;QD=3.09;ReadPosRankSum=1.340;VQSLOD=2.5719;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:22:2.17:0,2,1315	0/0:5,0:5:15.05:0,15,625	0/0:6,0:6:18.06:0,18,646	0/0:10,0:9:18.21:0,18,746	0/0:9,0:4:6.02:0,6,251	0/1:13,0:11:18.97:19,0,580	0/0:43,0:31:0.72:0,1,1743	0/0:32,0:16:20:0,20,888	0/1:27,3:28:99:185,0,1253	0/0:19,0:15:43.90:0,44,1281	./.	0/1:24,5:28:99:162,0,1439	0/1:21,2:17:2.10:2,0,1040	0/1:40,4:39:99:104,0,2216	0/1:15,4:19:99:140,0,1109	0/1:17,6:18:99:185,0,597	0/0:41,3:40:37.02:0,37,2704	0/1:41,2:34:10.99:11,0,2930	0/0:18,0:12:21.89:0,22,669	0/0:8,0:2:6.02:0,6,241	0/0:105,3:73:99:0,130,5772	0/0:7,0:5:15.05:0,15,627	0/0:4,0:3:5.93:0,6,251	0/0:49,2:45:86.86:0,87,3019	1/1:8,0:2:3.01:40,3,0	0/1:21,1:19:22.02:22,0,1466	0/0:15,0:14:23.75:0,24,510	0/1:8,2:9:86.15:86,0,716
chr10	88717083	.	G	GC	71.22	PASS	AB=0.815;AC=7;AF=0.130;AN=54;BaseQRankSum=8.497;DP=642;FS=2.665;HRun=0;HaplotypeScore=192.5105;InbreedingCoeff=-0.1189;MQ=41.88;MQ0=62;MQRankSum=-8.965;QD=0.44;ReadPosRankSum=-1.892;VQSLOD=2.0130;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,2:17:36.08:0,36,481	0/0:6,0:6:15.05:0,15,209	0/0:17,0:12:36.11:0,36,476	0/0:18,0:16:48.10:0,48,615	0/0:5,1:4:6.02:0,6,84	0/0:9,1:9:15.05:0,15,210	0/1:32,7:29:29.84:30,0,579	0/0:25,0:13:38.44:0,38,460	0/1:17,4:21:3.93:4,0,365	0/0:19,1:17:31.04:0,31,464	./.	0/1:21,6:26:25.88:26,0,428	0/1:19,3:20:8.40:8,0,273	0/0:29,11:36:18.42:0,18,696	0/0:19,1:20:20.68:0,21,384	0/1:12,6:15:78.36:78,0,120	0/0:37,6:39:14.59:0,15,881	0/0:41,4:37:14.86:0,15,961	0/0:17,1:13:17.49:0,17,344	0/0:4,2:2:6.02:0,6,84	0/0:91,8:73:99:0,165,2237	0/0:14,0:10:17.42:0,17,217	0/0:4,0:2:6.02:0,6,84	0/0:41,6:45:59.69:0,60,992	0/0:2,3:3:2.04:0,2,6	0/1:16,4:18:0.17:0,0,451	0/1:9,4:12:38.96:39,0,127	0/0:10,0:9:24.72:0,25,273
chr10	88717098	.	GGTGGTCTGGCAGCAA	G	5284.75	PASS	AB=0.951;AC=27;AF=0.482;AN=56;BaseQRankSum=13.290;DP=707;FS=4.389;HRun=0;HaplotypeScore=313.3521;InbreedingCoeff=-0.6684;MQ=44.26;MQ0=34;MQRankSum=-6.187;QD=9.17;ReadPosRankSum=-7.400;VQSLOD=1.8033;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:27:97.88:98,0,1003	0/1:9,0:8:24.60:25,0,763	0/0:25,0:15:18.30:0,18,753	0/1:25,0:18:72.83:73,0,649	0/1:11,0:10:5.61:6,0,227	0/1:11,0:11:23.11:23,0,470	0/1:40,0:32:93.47:93,0,1979	0/1:37,0:28:99:115,0,1007	0/1:22,3:25:99:490,0,1201	0/1:24,0:22:99:188,0,1671	1/1:8,0:7:5.02:69,5,0	0/1:26,5:31:99:601,0,1535	0/1:23,2:24:99:348,0,1129	0/1:28,3:29:99:407,0,2490	0/1:20,4:24:99:535,0,1288	0/1:11,6:16:99:620,0,457	0/1:37,3:39:99:168,0,2930	0/1:40,2:40:99:454,0,3549	0/1:19,0:17:55.38:55,0,668	0/0:5,0:4:6.02:0,6,292	0/0:98,3:83:16.05:0,16,6481	0/1:17,0:14:46.62:47,0,682	0/1:11,0:8:21.47:21,0,242	0/1:44,2:46:99:196,0,2775	1/1:5,0:4:11.86:79,12,0	0/1:19,0:18:99:155,0,1784	0/1:9,0:9:99:109,0,543	0/1:9,2:11:99:310,0,1012
chr10	88717907	.	AT	A	5207.63	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.975;DP=736;FS=3.166;HRun=8;HaplotypeScore=93.7158;InbreedingCoeff=0.9981;MQ=71.31;MQ0=0;MQRankSum=0.985;QD=23.56;ReadPosRankSum=2.451;VQSLOD=5.3337;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.17:0,60,713	0/0:9,0:9:27.08:0,27,326	0/0:22,0:22:31.09:0,31,576	0/0:14,0:14:18.36:0,18,365	0/0:32,1:33:58.28:0,58,974	0/0:40,0:40:99:0,105,1235	0/0:15,0:15:42.12:0,42,496	0/0:43,0:43:99:0,111,1317	0/0:29,0:29:84.26:0,84,1014	0/0:42,0:42:99:0,114,1362	0/0:26,0:26:75.20:0,75,872	0/0:28,0:28:84.24:0,84,1000	1/1:2,22:24:60.09:579,60,0	0/0:23,0:23:60.17:0,60,713	1/1:1,29:30:81.13:782,81,0	1/1:2,19:21:44.96:434,45,0	0/0:31,0:31:81.25:0,81,978	0/0:21,0:21:34.33:0,34,615	1/1:5,16:21:48.04:457,48,0	1/1:4,34:38:93.13:898,93,0	0/0:9,0:9:24.04:0,24,266	0/0:31,0:31:78.23:0,78,932	1/1:1,31:32:87.14:840,87,0	1/1:1,18:19:51.08:493,51,0	0/0:32,0:32:90.26:0,90,1074	0/0:30,0:30:75.22:0,75,896	1/1:6,30:36:75.58:724,76,0	0/0:14,0:13:39.12:0,39,471
chr10	88720092	.	A	AT	1245.84	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.623;DP=704;FS=0.572;HRun=9;HaplotypeScore=104.6111;InbreedingCoeff=0.9306;MQ=78.67;MQ0=0;MQRankSum=-1.154;QD=24.43;ReadPosRankSum=-0.438;VQSLOD=3.1042;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:33:55.16:836,55,0	0/0:12,0:12:29.98:0,30,260	0/0:19,0:19:41.89:0,42,350	0/0:18,0:18:5.67:0,6,248	0/0:45,0:45:99:0,123,1061	0/0:26,0:25:68.97:0,69,599	0/0:24,0:24:61.50:0,61,540	0/0:26,0:26:59.94:0,60,514	1/1:1,17:18:48.13:531,48,0	0/0:35,0:35:92.96:0,93,807	0/0:28,0:28:74.97:0,75,650	0/0:22,0:22:62.96:0,63,542	0/0:28,0:29:73.97:0,74,627	0/0:28,0:29:77:0,77,653	0/0:36,0:36:99:0,102,885	0/0:24,0:24:57.43:0,57,490	0/0:25,0:27:76.03:0,76,632	0/0:20,0:20:50.92:0,51,431	0/0:17,0:17:41.96:0,42,359	0/0:32,0:32:86.94:0,87,747	0/0:21,0:21:53.98:0,54,469	0/0:18,0:18:50.98:0,51,443	0/0:32,0:32:95.02:0,95,813	0/0:21,0:21:56.97:0,57,492	0/0:23,0:23:56.96:0,57,491	0/0:27,0:27:68.67:0,69,595	0/0:31,0:31:74.93:0,75,642	0/0:10,0:10:11.99:0,12,104
chr10	88720659	.	AAACACC	A	13040.13	PASS	AC=30;AF=0.577;AN=52;BaseQRankSum=5.386;DP=573;FS=1.478;HRun=0;HaplotypeScore=148.6357;InbreedingCoeff=0.9426;MQ=27.89;MQ0=124;MQRankSum=-5.909;QD=48.48;ReadPosRankSum=3.532;VQSLOD=5.1767;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:30:36.12:0,36,1189	0/0:7,0:5:12:0,12,336	./.	./.	1/1:3,22:18:27.09:664,27,0	1/1:2,22:22:57.16:1350,57,0	1/1:5,10:10:21.07:517,21,0	0/0:29,0:16:30.09:0,30,954	0/0:26,0:23:48.16:0,48,1654	0/0:23,0:20:54.19:0,54,1950	0/0:21,0:20:27.05:0,27,874	1/1:1,23:23:63.22:1551,63,0	1/1:4,15:16:39.07:854,39,0	1/1:2,20:20:57.16:1350,57,0	1/1:2,18:20:51.14:1184,51,0	1/1:2,17:17:51.18:1236,51,0	0/0:23,0:15:15.05:0,15,541	1/1:3,3:3:6.02:148,6,0	1/1:2,8:8:18.06:443,18,0	1/1:2,28:16:36.12:886,36,0	0/0:24,0:8:6.02:0,6,219	1/1:2,18:17:48.16:1159,48,0	1/1:2,14:10:24.08:591,24,0	1/1:3,3:3:6.02:148,6,0	0/0:25,0:25:53.97:0,54,1361	0/0:22,0:16:42.14:0,42,1463	1/1:0,13:13:39.13:960,39,0	0/0:15,0:9:21.07:0,21,769
chr10	88720755	.	ATGTG	A	1885.64	PASS	AB=1.000;AC=36;AF=0.720;AN=50;BaseQRankSum=7.081;DP=600;FS=9.793;HRun=0;HaplotypeScore=231.4938;InbreedingCoeff=0.3863;MQ=70.09;MQ0=1;MQRankSum=-5.287;QD=4.57;ReadPosRankSum=5.295;VQSLOD=0.4102;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:14:14.97:0,15,186	1/1:7,0:5:6.46:50,6,0	0/0:36,0:32:72.06:0,72,769	0/0:30,0:28:53.17:0,53,617	0/1:36,0:24:19.21:19,0,23	1/1:20,0:16:11.91:98,12,0	0/1:12,0:11:14.88:15,0,44	1/1:14,0:14:26.78:192,27,0	0/0:25,0:24:26.99:0,27,360	0/1:31,0:26:77.69:400,0,78	1/1:16,0:11:3:25,3,0	1/1:28,0:28:10.60:93,11,0	1/1:19,4:23:15.81:138,16,0	1/1:37,0:36:5.99:50,6,0	1/1:26,3:29:5.94:43,6,0	./.	1/1:14,0:13:8.93:67,9,0	1/1:5,0:5:5.95:44,6,0	1/1:14,0:10:8.59:119,9,0	1/1:23,5:21:6.01:60,6,0	1/1:6,0:2:2.94:18,3,0	0/1:23,0:15:52.02:52,0,84	./.	./.	0/0:37,0:32:83.98:0,84,1281	1/1:26,0:24:17.72:416,18,0	1/1:3,27:28:3.01:54,3,0	1/1:14,0:8:0.47:102,0,0
chr10	88720759	.	GTGTGTGTATGTA	G	1180.28	PASS	AB=1.000;AC=20;AF=0.370;AN=54;BaseQRankSum=4.657;DP=619;FS=5.267;HRun=0;HaplotypeScore=281.9616;InbreedingCoeff=0.0197;MQ=64.66;MQ0=2;MQRankSum=-6.397;QD=4.04;ReadPosRankSum=2.597;VQSLOD=1.9380;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:17:18.03:0,18,489	0/1:6,0:4:15.98:16,0,62	0/0:32,0:28:72.10:0,72,863	0/0:27,0:25:53.18:0,53,738	0/0:37,0:25:18.04:0,18,504	0/1:22,0:18:31.94:32,0,141	0/0:15,0:12:0.53:0,1,263	1/1:1,15:16:44.72:399,45,0	0/0:24,0:23:27.04:0,27,818	0/1:27,0:24:99:111,0,742	0/0:17,0:12:1.82:0,2,5	0/1:32,0:32:2.12:2,0,425	1/1:23,0:23:2.24:70,2,0	0/0:40,0:39:5.95:0,6,75	1/1:28,0:28:5.94:43,6,0	./.	0/1:14,0:13:26.92:34,0,27	0/1:6,0:6:6.52:7,0,165	1/1:13,0:10:4.83:77,5,0	0/1:33,0:27:41.72:42,0,336	1/1:7,0:3:2.94:18,3,0	0/1:23,0:15:21.43:21,0,770	0/0:24,0:18:2.75:0,3,82	0/0:9,0:9:3.48:0,3,86	0/0:40,0:34:93.22:0,93,3332	0/1:27,0:25:99:384,0,366	0/0:30,0:27:5.81:0,6,120	0/1:14,0:8:82.14:82,0,96
chr10	88720763	.	G	GTGTA	1580.46	PASS	AB=1.000;AC=19;AF=0.413;AN=46;BaseQRankSum=-4.817;DP=632;FS=0.693;HRun=0;HaplotypeScore=237.8034;InbreedingCoeff=0.2390;MQ=56.25;MQ0=4;MQRankSum=3.205;QD=5.00;ReadPosRankSum=-2.854;VQSLOD=2.2771;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:21:49.98:96,0,50	0/0:6,0:4:2.99:0,3,24	./.	./.	1/1:36,0:26:18:234,18,0	0/0:23,0:19:8.94:0,9,65	0/1:15,0:12:18.58:52,0,19	0/1:17,0:15:0.01:0,0,0	0/1:32,0:25:7.99:8,0,83	0/1:28,0:24:98.11:98,0,173	1/1:18,0:13:0.47:1,0,0	1/1:30,0:31:14.87:109,15,0	0/0:24,0:23:9.95:0,10,68	./.	0/0:29,0:29:5.99:0,6,50	0/0:13,0:11:0:0,0,0	./.	1/1:5,0:5:6.42:45,6,0	0/0:10,0:8:8.49:0,8,59	0/0:36,0:30:20.90:0,21,166	./.	1/1:26,0:17:23.98:284,24,0	0/0:23,0:17:5.99:0,6,48	0/0:9,0:9:2.83:0,3,24	1/1:38,0:32:63.02:634,63,0	0/1:27,0:25:99:125,0,154	0/0:31,0:27:8.99:0,9,78	0/1:14,0:8:28.03:42,0,28
chr10	88720789	.	G	GTATC	437.89	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=4.579;DP=654;FS=35.483;HRun=0;HaplotypeScore=228.5887;InbreedingCoeff=0.3535;MQ=42.40;MQ0=9;MQRankSum=1.644;QD=2.15;ReadPosRankSum=3.908;VQSLOD=1.5035;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:22:14.94:0,15,186	0/0:7,0:6:17.97:0,18,167	0/0:4,0:3:2.97:0,3,20	0/0:4,0:3:5.97:0,6,45	0/1:48,0:37:40.04:40,0,289	0/0:28,0:24:12.02:0,12,155	0/1:23,0:18:1.02:1,0,167	0/0:39,0:32:70.44:0,70,480	0/0:36,0:27:24.48:0,24,291	0/0:29,0:26:40.94:0,41,700	1/1:17,0:14:0.47:1,0,0	0/0:29,0:28:5.40:0,5,48	0/0:24,0:23:25.37:0,25,249	0/0:42,0:39:20.97:0,21,173	0/0:22,0:22:12.01:0,12,148	0/0:13,0:11:8.98:0,9,73	0/0:17,0:17:23.91:0,24,191	0/0:9,0:8:12.82:0,13,89	0/0:9,0:6:8.62:0,9,77	0/0:44,0:38:56.46:0,56,607	0/1:4,0:3:0:0,0,0	0/1:28,0:18:72.62:88,0,73	0/0:27,0:22:26.93:0,27,259	0/0:7,0:7:6.48:0,6,74	0/1:42,0:36:53.95:54,0,227	1/1:13,9:20:16.13:224,16,0	0/0:33,0:29:26.98:0,27,265	1/1:17,2:12:14.79:165,15,0
chr10	88720797	.	G	GTATC	3808.97	PASS	AB=1.000;AC=40;AF=0.800;AN=50;BaseQRankSum=2.247;DP=678;FS=0.000;HRun=0;HaplotypeScore=211.4317;InbreedingCoeff=0.6125;MQ=42.60;MQ0=14;MQRankSum=-0.200;QD=7.08;ReadPosRankSum=1.598;VQSLOD=2.7192;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:21:23.95:308,24,0	1/1:7,0:6:14.98:125,15,0	./.	./.	0/1:49,0:38:38.27:38,0,289	./.	0/0:25,0:20:17.94:0,18,146	1/1:48,0:36:22.54:141,23,0	1/1:34,0:25:15.88:149,16,0	1/1:30,0:27:43.08:433,43,0	1/1:7,11:16:0.47:1,0,0	0/0:29,0:28:6.87:0,7,50	1/1:22,0:21:21.12:160,21,0	0/0:41,0:38:20.98:0,21,176	1/1:23,0:23:8.99:75,9,0	1/1:15,0:13:17.98:149,18,0	1/1:17,0:17:26.96:221,27,0	0/0:11,0:9:13.89:0,14,103	1/1:14,0:7:3:27,3,0	1/1:44,0:39:42.26:347,42,0	1/1:5,0:5:5.49:40,5,0	0/1:28,0:18:68.73:69,0,116	1/1:26,0:21:27.71:223,28,0	1/1:10,0:10:11.51:98,12,0	1/1:41,0:35:27.76:489,28,0	1/1:25,0:22:20.95:311,21,0	1/1:34,0:30:16.64:189,17,0	1/1:20,0:13:20.98:216,21,0
chr10	88722359	.	T	TGCAGCAGGTGGTCTG	703.24	PASS	AB=0.911;AC=23;AF=0.575;AN=40;BaseQRankSum=0.216;DP=462;FS=16.827;HRun=0;HaplotypeScore=105.2253;InbreedingCoeff=0.4007;MQ=43.25;MQ0=35;MQRankSum=-4.574;QD=2.46;ReadPosRankSum=-3.741;VQSLOD=-0.3760;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:9:0.47:0,0,1	./.	0/0:9,0:6:15.05:0,15,386	0/0:7,0:4:9.03:0,9,124	0/0:15,0:6:0:0,0,0	./.	1/1:28,0:13:12:127,12,0	./.	./.	1/1:26,0:11:9.03:176,9,0	./.	1/1:33,1:21:20.36:221,20,0	1/1:14,0:10:8.96:73,9,0	1/1:19,14:34:2.96:26,3,0	1/1:16,1:10:5.98:59,6,0	0/1:3,8:9:0:0,0,1	0/1:16,0:12:28.83:29,0,230	./.	1/1:11,0:5:5.98:66,6,0	0/1:8,0:3:0:0,0,0	0/1:33,0:24:21.82:22,0,447	1/1:16,0:5:0.47:1,0,0	0/1:9,0:4:0.10:0,0,0	1/1:18,0:14:4.78:25,5,0	0/0:20,0:20:48.12:0,48,1438	./.	0/0:4,5:10:0.04:0,0,0	./.
chr10	88722484	.	T	TCTGC	30199.10	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=0.622;DP=704;FS=13.413;HRun=0;HaplotypeScore=124.5753;InbreedingCoeff=0.9952;MQ=57.52;MQ0=4;MQRankSum=-5.484;QD=48.95;ReadPosRankSum=4.878;VQSLOD=5.3467;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:32:78.18:1924,78,0	1/1:1,11:13:32.90:871,33,0	0/0:26,0:26:60:0,60,1017	0/0:29,0:29:72.18:0,72,1216	1/1:3,17:19:36.03:945,36,0	1/1:4,20:24:48.16:1266,48,0	1/1:6,24:31:60.21:1556,60,0	1/1:8,10:20:45.10:885,45,0	1/1:5,19:22:51.17:1302,51,0	1/1:7,19:26:63.20:1580,63,0	1/1:4,7:11:17.53:473,18,0	1/1:11,31:37:66.22:1697,66,0	1/1:6,16:21:44.94:1166,45,0	1/1:6,21:21:51.17:1340,51,0	1/1:9,30:36:69.24:1809,69,0	1/1:2,25:26:57.20:1503,57,0	1/1:4,32:37:87.30:2297,87,0	1/1:1,15:16:33.11:870,33,0	1/1:6,11:16:33.10:788,33,0	1/1:5,20:27:44.45:1185,44,0	1/1:6,19:25:36.05:833,36,0	1/1:2,16:18:33.11:868,33,0	1/1:4,12:16:23.56:633,24,0	1/1:6,15:20:30.10:792,30,0	0/0:32,0:32:84.28:0,84,1495	1/1:3,17:23:60.17:1403,60,0	1/1:1,20:17:48.16:1264,48,0	1/1:2,13:16:36.12:949,36,0
chr10	88723451	.	CA	C	12721.56	PASS	AB=0.802;AC=45;AF=0.804;AN=56;BaseQRankSum=12.254;DP=794;FS=18.754;HRun=3;HaplotypeScore=247.4841;InbreedingCoeff=0.2027;MQ=47.70;MQ0=158;MQRankSum=-10.116;QD=17.50;ReadPosRankSum=2.342;VQSLOD=1.6952;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,10:25:99:246,0,313	1/1:7,13:13:36.11:446,36,0	0/1:21,0:12:17.48:17,0,275	0/0:27,0:21:27.13:0,27,500	1/1:11,21:26:54.17:668,54,0	1/1:14,21:26:20.13:700,20,0	0/1:11,13:20:56.07:267,0,56	0/1:31,8:26:16.05:270,0,16	1/1:6,20:20:36.11:446,36,0	1/1:7,22:24:20.04:700,20,0	1/1:6,25:25:66.21:816,66,0	1/1:4,11:11:24.07:294,24,0	1/1:14,24:26:60.19:742,60,0	1/1:9,11:15:27.08:334,27,0	1/1:12,22:23:57.18:705,57,0	1/1:8,22:25:60.19:742,60,0	0/1:24,11:26:99:261,0,136	1/1:7,6:9:18.06:223,18,0	1/1:14,5:9:9.03:112,9,0	1/1:7,19:21:51.16:631,51,0	0/1:15,6:16:90.38:90,0,152	1/1:9,36:39:99:1262,102,0	1/1:11,21:22:60.19:742,60,0	0/1:22,6:20:99:121,0,165	0/0:40,0:35:96.29:0,96,1345	1/1:7,15:16:42.13:520,42,0	1/1:10,33:35:90.28:1107,90,0	1/1:8,7:7:21.07:260,21,0
chr10	88723860	.	TTC	T	25763.44	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=12.789;DP=738;FS=5.934;HRun=0;HaplotypeScore=220.4913;InbreedingCoeff=0.9992;MQ=87.06;MQ0=0;MQRankSum=-12.390;QD=39.76;ReadPosRankSum=5.795;VQSLOD=4.7057;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:87.29:1263,87,0	1/1:1,8:9:24.08:353,24,0	0/0:32,0:32:67.70:0,68,1660	0/0:31,0:31:93.23:0,93,1801	1/1:0,12:12:36.12:530,36,0	1/1:1,29:30:78.26:1148,78,0	1/1:0,29:29:81.27:1189,81,0	1/1:0,19:19:57.19:839,57,0	1/1:0,28:28:81.27:1192,81,0	1/1:2,32:33:90.30:1324,90,0	1/1:1,20:21:60.20:880,60,0	1/1:1,22:23:63.21:927,63,0	1/1:1,40:41:99:1495,102,0	1/1:1,34:35:96.32:1413,96,0	1/1:1,39:40:99:1583,108,0	1/1:0,34:34:93.31:1369,93,0	1/1:0,24:24:63.21:928,63,0	1/1:2,19:21:54.18:795,54,0	1/1:1,26:26:75.25:1104,75,0	1/1:1,20:20:45.15:662,45,0	1/1:0,28:28:72.24:1050,72,0	1/1:0,27:27:78.26:1148,78,0	1/1:0,16:16:42.14:618,42,0	1/1:1,31:32:81.03:1192,81,0	0/0:27,0:26:81.28:0,81,1645	1/1:1,29:30:90.29:1307,90,0	1/1:0,23:23:63.21:927,63,0	1/1:0,12:12:36.12:530,36,0
chr10	88724242	.	C	CACT	630.11	PASS	AB=0.912;AC=10;AF=0.179;AN=56;BaseQRankSum=-0.742;DP=381;FS=22.021;HRun=0;HaplotypeScore=206.0846;InbreedingCoeff=-0.0680;MQ=50.48;MQ0=0;MQRankSum=-4.744;QD=5.43;ReadPosRankSum=-2.871;VQSLOD=1.2072;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:3.01:31,3,0	0/0:8,0:8:20.78:0,21,234	0/0:27,0:20:59.23:0,59,916	0/0:40,0:30:70.44:0,70,1110	0/0:6,0:6:3.22:0,3,44	0/0:11,0:11:21.07:0,21,315	0/0:15,0:15:30:0,30,419	0/1:15,3:18:99:184,0,284	0/1:5,0:5:40.69:41,0,51	0/1:15,6:20:99:229,0,276	0/1:12,0:12:6.73:7,0,111	0/0:18,0:18:46.39:0,46,693	0/0:10,0:10:28.91:0,29,417	0/0:12,0:12:20.80:0,21,285	0/0:19,0:19:39.54:0,40,613	0/1:9,1:10:40.52:41,0,365	0/0:5,0:5:12:0,12,166	0/0:5,0:5:12.04:0,12,186	0/0:10,0:7:15.05:0,15,248	0/1:11,2:12:86.55:87,0,136	0/0:13,0:11:5.97:0,6,69	0/1:17,0:17:31.25:31,0,159	0/0:12,0:11:17.44:0,17,190	0/0:9,0:9:8.90:0,9,114	0/0:27,0:27:78.25:0,78,1273	0/1:14,2:15:99:120,0,262	0/0:10,0:10:27.08:0,27,396	0/0:8,0:8:22.88:0,23,317
chr10	88724244	.	C	CTGT	195.01	PASS	AB=0.952;AC=8;AF=0.143;AN=56;BaseQRankSum=0.509;DP=390;FS=8.622;HRun=0;HaplotypeScore=209.1558;InbreedingCoeff=0.0307;MQ=48.57;MQ0=1;MQRankSum=-1.525;QD=2.17;ReadPosRankSum=-0.545;VQSLOD=1.5822;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:4:4.57:72,5,0	0/0:8,0:8:20.95:0,21,265	0/0:29,0:21:18.27:0,18,834	0/0:39,0:29:58.94:0,59,1039	0/0:7,0:7:3.21:0,3,31	0/0:13,0:13:21.07:0,21,338	0/0:15,0:15:30.06:0,30,448	0/1:18,0:18:41.67:42,0,389	0/1:3,2:5:42.90:116,0,43	0/1:23,0:21:60.33:60,0,305	0/0:12,0:12:10.87:0,11,183	0/0:18,0:18:46.35:0,46,677	0/0:10,0:10:28.91:0,29,432	0/0:12,0:12:20.99:0,21,281	0/0:19,0:19:39.60:0,40,634	0/1:10,0:10:3.65:4,0,341	0/0:5,0:5:9.03:0,9,134	0/0:5,0:5:12.04:0,12,186	0/0:10,0:7:15.05:0,15,231	0/1:13,0:12:5.83:6,0,203	0/0:11,2:11:2.59:0,3,50	0/0:17,0:17:20.34:0,20,237	0/0:12,0:11:17.72:0,18,176	0/0:8,0:8:8.96:0,9,118	0/0:30,0:30:78.27:0,78,1299	0/1:17,0:16:21.28:21,0,298	0/0:10,0:10:27.05:0,27,392	0/0:8,0:8:12.71:0,13,303
chr10	88724247	.	T	TCAA	630.17	PASS	AB=0.945;AC=16;AF=0.286;AN=56;BaseQRankSum=3.407;DP=389;FS=18.361;HRun=0;HaplotypeScore=206.8214;InbreedingCoeff=-0.0202;MQ=48.34;MQ0=2;MQRankSum=-4.650;QD=4.12;ReadPosRankSum=-1.797;VQSLOD=1.2909;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:2.84:14,3,0	0/1:8,1:9:65.49:65,0,185	0/0:30,0:21:44.08:0,44,776	0/0:39,0:28:69.31:0,69,939	1/1:7,0:7:3.22:22,3,0	0/0:13,0:13:6.88:0,7,257	0/0:14,0:14:26.12:0,26,412	0/0:15,0:15:37.67:0,38,540	1/1:5,0:5:10.73:46,11,0	0/1:22,1:21:99:132,0,384	0/1:12,1:12:86.51:94,0,87	0/0:18,0:18:44.27:0,44,681	0/0:10,0:10:1.31:0,1,366	0/1:12,0:12:13.26:13,0,238	0/0:17,0:17:39.60:0,40,670	0/0:10,0:10:23.03:0,23,390	0/0:4,0:4:9.03:0,9,139	0/0:5,0:5:12.04:0,12,200	0/0:11,0:8:15.04:0,15,225	0/1:13,0:12:72.02:137,0,72	0/0:11,0:9:3.01:0,3,53	0/1:14,6:20:59.13:59,0,229	0/1:12,0:11:61.28:61,0,85	0/0:8,0:8:8.96:0,9,124	0/0:31,0:31:87.30:0,87,1527	0/1:18,0:17:48.27:48,0,339	0/1:10,0:10:6.78:7,0,300	0/1:7,1:8:88.78:89,0,278
chr10	88724263	.	ACTG	A	789.39	PASS	AB=0.853;AC=15;AF=0.268;AN=56;BaseQRankSum=2.263;DP=335;FS=27.000;HRun=0;HaplotypeScore=179.6830;InbreedingCoeff=-0.1242;MQ=44.91;MQ0=3;MQRankSum=-2.290;QD=5.94;ReadPosRankSum=2.146;VQSLOD=1.4875;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,1:8:24.88:25,0,69	0/1:6,2:8:88.52:126,0,89	0/0:23,0:13:30.10:0,30,619	0/0:36,0:21:37.18:0,37,1022	1/1:5,1:6:3.89:57,4,0	0/0:10,0:10:0.06:0,0,281	0/1:9,2:11:24.94:25,0,310	0/0:14,0:14:35.69:0,36,672	0/1:3,2:5:29.58:100,0,30	0/1:16,1:15:11.88:12,0,500	0/1:10,2:11:59.19:59,0,77	0/0:15,1:16:37.34:0,37,496	0/0:9,0:9:19.80:0,20,200	0/1:5,1:6:37.96:38,0,174	0/0:14,0:14:35.52:0,36,456	0/0:9,0:9:24.26:0,24,354	0/0:3,0:3:9.03:0,9,177	0/0:4,0:4:12.02:0,12,203	0/0:7,0:6:14.95:0,15,220	1/1:6,7:12:3.97:237,4,0	0/0:7,2:7:5.95:0,6,80	0/1:13,1:14:54.42:54,0,101	0/1:9,2:10:37:37,0,98	0/0:8,0:8:8.81:0,9,88	0/0:30,0:30:87.30:0,87,2116	0/1:10,2:11:78.45:78,0,364	0/0:9,0:9:18.36:0,18,271	0/1:8,2:10:96.07:96,0,288
chr10	88724276	.	ACTG	A	2559.19	PASS	AB=0.887;AC=34;AF=0.607;AN=56;BaseQRankSum=8.902;DP=302;FS=142.011;HRun=0;HaplotypeScore=157.0603;InbreedingCoeff=0.2162;MQ=47.52;MQ0=6;MQRankSum=-5.011;QD=14.46;ReadPosRankSum=4.557;VQSLOD=0.9006;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:24.06:265,24,0	0/1:7,0:9:12.36:99,0,12	0/0:23,0:11:5.85:0,6,351	0/0:41,0:19:20.92:0,21,755	0/1:5,3:8:0.85:1,0,19	0/1:6,0:6:22.78:23,0,55	0/1:8,0:9:45.07:68,0,45	0/1:8,0:8:84.10:84,0,98	1/1:5,0:5:12.13:106,12,0	0/0:12,0:10:19.37:0,19,138	0/0:8,0:7:3.69:0,4,15	1/1:13,0:13:30.49:295,30,0	1/1:9,0:9:24.33:230,24,0	1/1:5,0:5:12.24:108,12,0	1/1:15,0:15:37.02:373,37,0	1/1:8,1:9:26.89:273,27,0	1/1:1,0:1:2.84:14,3,0	1/1:3,0:3:5.96:47,6,0	0/1:6,1:6:7.98:88,0,8	0/1:11,1:13:21.69:113,0,22	0/0:10,0:8:3.01:0,3,74	1/1:7,2:9:11.08:121,11,0	0/1:7,1:8:0.35:0,0,70	1/1:5,0:5:3.01:32,3,0	0/0:30,0:30:90.28:0,90,2013	0/1:6,1:6:7.01:83,0,7	1/1:8,0:8:17.70:160,18,0	0/1:10,0:11:13.58:154,0,14
chr10	88724277	.	CTGT	C	4237.87	PASS	AB=0.797;AC=39;AF=0.696;AN=56;BaseQRankSum=9.073;DP=301;FS=152.219;HRun=0;HaplotypeScore=151.4628;InbreedingCoeff=0.3714;MQ=47.63;MQ0=6;MQRankSum=-4.829;QD=24.22;ReadPosRankSum=4.657;VQSLOD=1.7624;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:9:24:362,24,0	1/1:7,2:9:11.93:182,12,0	0/0:24,0:11:21.91:0,22,348	0/0:40,0:20:3.22:0,3,690	0/1:7,1:8:12.56:13,0,24	0/1:4,2:6:47.68:58,0,48	0/1:6,3:9:11.44:118,0,11	0/1:5,3:8:97.89:134,0,98	1/1:2,3:5:14.99:194,15,0	0/0:10,2:10:4.02:0,4,38	1/1:5,2:6:4.29:24,4,0	1/1:2,11:13:33.07:493,33,0	1/1:2,7:9:26.03:369,26,0	1/1:2,3:5:12.50:174,12,0	1/1:2,13:15:39.56:607,40,0	1/1:1,8:9:27.09:408,27,0	1/1:0,1:1:3.01:32,3,0	1/1:1,2:3:6.02:89,6,0	1/1:6,1:6:8.94:94,9,0	0/1:11,2:13:4.82:108,0,5	0/0:6,3:7:3.01:0,3,68	1/1:8,1:9:6.70:104,7,0	0/0:7,1:8:5.91:0,6,41	1/1:0,5:5:2.80:48,3,0	0/0:31,0:31:87.19:0,87,1777	1/1:6,1:6:11.92:114,12,0	1/1:2,5:7:17.73:253,18,0	1/1:7,4:11:10.77:261,11,0
chr10	88724283	.	TCCA	T	94.19	PASS	AB=0.948;AC=13;AF=0.232;AN=56;BaseQRankSum=2.713;DP=290;FS=26.388;HRun=0;HaplotypeScore=170.1831;InbreedingCoeff=-0.2193;MQ=54.45;MQ0=4;MQRankSum=-0.983;QD=0.70;ReadPosRankSum=0.751;VQSLOD=1.2790;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:0.11:0,0,60	0/1:9,0:9:15.28:15,0,63	0/0:26,0:10:26.07:0,26,375	0/1:42,0:23:27.34:27,0,638	0/0:5,0:5:0.39:0,0,77	0/0:3,0:3:0.47:0,0,1	0/1:8,0:8:28.74:29,0,70	0/0:9,0:9:18.01:0,18,162	0/0:7,0:7:15.55:0,16,133	0/0:7,0:6:11.66:0,12,128	0/0:5,0:5:0.47:0,0,1	0/0:14,0:14:9.36:0,9,38	0/1:11,0:11:9.53:10,0,95	0/1:7,0:7:7.35:7,0,16	0/1:17,0:17:4.69:5,0,23	0/1:10,1:11:22:28,0,22	0/0:1,0:1:2.98:0,3,21	0/1:2,0:2:0.18:0,0,13	0/1:5,1:5:18.29:30,0,18	0/0:13,0:13:6.06:0,6,67	0/0:9,0:7:3.01:0,3,67	0/1:4,2:6:6.47:29,0,6	0/0:8,1:9:4.68:0,5,61	0/1:5,0:5:0.01:0,0,0	0/0:29,0:29:69.15:0,69,1431	0/1:3,1:4:25.54:26,0,43	0/1:7,0:7:15.82:16,0,17	0/0:9,0:9:3.09:0,3,120
chr10	88724290	.	CTGT	C	2136.80	PASS	AB=0.814;AC=31;AF=0.554;AN=56;BaseQRankSum=3.587;DP=297;FS=61.606;HRun=0;HaplotypeScore=165.0881;InbreedingCoeff=-0.4996;MQ=51.42;MQ0=6;MQRankSum=-2.715;QD=8.35;ReadPosRankSum=3.062;VQSLOD=0.9543;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:9:36.66:79,0,37	0/1:5,3:10:99:136,0,113	0/1:31,1:13:48.63:49,0,345	0/1:45,0:24:29.10:29,0,583	0/1:5,1:5:16.80:36,0,17	1/1:2,1:3:3.01:53,3,0	0/1:6,1:8:48.23:84,0,48	0/1:9,1:10:35.04:35,0,110	0/1:5,2:7:89.50:89,0,123	0/1:6,1:6:40.91:41,0,75	1/1:2,1:3:2.96:19,3,0	0/1:9,6:15:66.05:253,0,66	0/1:8,5:13:99:220,0,215	0/1:5,3:8:52.50:133,0,52	0/1:6,10:16:99:449,0,155	0/1:6,4:10:93.54:167,0,94	1/1:0,1:1:3.01:32,3,0	0/1:1,1:2:26.46:34,0,26	0/1:6,0:5:16.64:17,0,36	1/1:10,2:13:4.11:21,4,0	0/0:8,2:7:3.01:0,3,68	1/1:5,1:6:9.01:38,9,0	0/0:8,0:8:6.74:0,7,42	1/1:1,3:4:1.34:4,1,0	0/0:23,0:23:66.23:0,66,1475	0/1:4,0:4:5.15:5,0,47	0/1:6,3:9:71.49:119,0,71	0/1:5,3:9:39.82:149,0,40
chr10	88724311	.	C	CACT	1064.95	PASS	AB=0.823;AC=15;AF=0.278;AN=54;BaseQRankSum=2.756;DP=256;FS=22.457;HRun=0;HaplotypeScore=135.0394;InbreedingCoeff=-0.1775;MQ=57.58;MQ0=5;MQRankSum=-1.049;QD=11.97;ReadPosRankSum=-1.186;VQSLOD=1.5250;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:8:3.82:4,0,71	0/1:7,1:8:63.25:63,0,188	0/0:42,0:24:45.26:0,45,763	0/0:52,0:32:52.03:0,52,822	./.	0/0:2,0:2:1.88:0,2,42	0/1:6,0:6:27.15:27,0,59	0/0:10,0:6:15.01:0,15,208	0/0:5,0:5:12.14:0,12,151	0/0:2,0:2:5.93:0,6,62	1/1:2,0:2:2.96:30,3,0	0/1:8,4:12:99:224,0,151	0/1:7,3:10:99:172,0,253	0/1:6,2:8:38.70:126,0,39	0/1:8,4:12:99:207,0,146	0/1:4,3:7:99:156,0,131	1/1:0,1:1:3.01:49,3,0	0/1:1,1:2:41.36:51,0,41	0/0:6,0:5:8.78:0,9,110	0/0:2,1:3:2.96:0,3,19	0/0:6,0:5:2.97:0,3,20	0/0:6,0:5:13.28:0,13,171	0/0:4,0:4:5.38:0,5,55	0/0:0,2:2:0:0,0,0	0/0:21,0:21:60.18:0,60,972	0/0:2,0:2:2.94:0,3,18	0/1:6,1:7:47.30:47,0,148	0/1:5,1:6:51.33:51,0,126
chr10	88724325	.	GTTC	G	1423.34	PASS	AB=0.893;AC=31;AF=0.620;AN=50;BaseQRankSum=8.849;DP=203;FS=87.514;HRun=0;HaplotypeScore=100.5922;InbreedingCoeff=0.4852;MQ=70.88;MQ0=3;MQRankSum=-7.090;QD=17.36;ReadPosRankSum=4.367;VQSLOD=-0.0863;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:3,0:3:0:0,0,0	1/1:1,4:6:17.95:184,18,0	0/0:37,1:24:65.14:0,65,1233	0/0:49,1:35:89.63:0,90,1505	./.	0/0:1,0:1:2.68:0,3,11	0/1:3,1:4:5.88:46,0,6	1/1:8,0:3:1.55:4,2,0	1/1:3,2:5:9.02:93,9,0	./.	0/0:1,0:1:2.60:0,3,10	1/1:2,7:9:9.03:163,9,0	1/1:2,5:7:14.87:162,15,0	1/1:1,3:4:5.36:81,5,0	1/1:2,6:8:18.03:193,18,0	1/1:0,5:5:15.03:150,15,0	1/1:0,1:1:3.01:33,3,0	1/1:0,2:2:1.45:40,1,0	0/0:5,0:3:5.23:0,5,38	0/1:1,0:1:0:0,0,0	0/1:3,0:2:0:0,0,0	1/1:3,0:2:3.01:39,3,0	1/1:0,3:3:2.82:37,3,0	./.	0/0:22,0:22:66.23:0,66,1559	0/0:1,0:1:3.01:0,3,56	1/1:0,6:6:18.06:253,18,0	0/1:2,2:4:6.35:95,0,6
chr10	88724336	.	CTGTCTAT	C	1595.15	PASS	AB=1.000;AC=32;AF=0.696;AN=46;BaseQRankSum=8.616;DP=179;FS=75.877;HRun=0;HaplotypeScore=95.5317;InbreedingCoeff=0.5511;MQ=75.37;MQ0=1;MQRankSum=-6.079;QD=23.81;ReadPosRankSum=5.464;VQSLOD=0.1735;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,3:5:11.88:207,12,0	0/0:37,0:25:53.78:0,54,2472	0/0:38,0:31:84.07:0,84,2529	./.	1/1:1,0:1:2.98:21,3,0	1/1:3,0:3:5.93:40,6,0	1/1:7,0:2:2.96:19,3,0	1/1:1,2:3:6.02:112,6,0	./.	1/1:2,0:2:2.71:12,3,0	1/1:4,3:7:12.01:187,12,0	1/1:0,5:5:15.05:302,15,0	1/1:2,2:4:8.20:85,8,0	1/1:1,4:5:14.72:234,15,0	1/1:2,3:5:8.98:170,9,0	0/1:1,0:1:0:0,0,0	1/1:1,1:2:3.46:25,3,0	0/1:5,0:3:1.83:2,0,40	0/1:1,0:1:0:0,0,0	0/1:2,0:1:0:0,0,0	./.	0/0:4,0:4:0.89:0,1,2	./.	0/0:24,0:24:72.23:0,72,2736	0/0:1,0:1:3.01:0,3,61	1/1:1,4:5:15.02:299,15,0	1/1:4,0:4:6.23:20,6,0
chr10	88724342	.	ATTACTGT	A	360.12	PASS	AB=1.000;AC=18;AF=0.450;AN=40;BaseQRankSum=6.595;DP=162;FS=27.786;HRun=0;HaplotypeScore=99.2047;InbreedingCoeff=0.3724;MQ=76.71;MQ0=1;MQRankSum=-4.149;QD=10.29;ReadPosRankSum=4.368;VQSLOD=0.3440;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:4,0:4:3.11:19,0,3	0/0:38,0:27:59.80:0,60,2430	0/0:37,0:31:65.27:0,65,2318	./.	1/1:1,0:1:2.22:7,2,0	0/1:3,0:3:27.69:58,0,28	./.	1/1:2,0:2:0.80:2,1,0	./.	0/0:1,0:1:0.47:0,0,1	0/0:5,1:6:1.46:0,1,31	1/1:5,0:5:5.33:38,5,0	1/1:3,1:4:5.50:72,6,0	1/1:4,1:5:3.40:82,3,0	1/1:3,0:3:1.41:3,1,0	./.	0/0:1,0:1:3.01:0,3,35	0/0:3,0:2:3.01:0,3,73	0/0:1,0:1:2.90:0,3,16	./.	./.	0/0:2,0:2:0.89:0,1,2	./.	0/0:25,0:25:75.26:0,75,2936	0/0:1,0:1:3.01:0,3,89	1/1:4,1:5:11.66:119,12,0	1/1:2,1:3:2.42:83,2,0
chr10	88724368	.	GTTC	G	1255.06	PASS	AB=0.888;AC=33;AF=0.750;AN=44;BaseQRankSum=8.466;DP=190;FS=77.736;HRun=0;HaplotypeScore=107.7310;InbreedingCoeff=0.3325;MQ=59.49;MQ0=2;MQRankSum=-6.642;QD=11.01;ReadPosRankSum=0.000;VQSLOD=-0.0605;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:4,1:5:8.96:97,9,0	0/0:40,0:26:65.58:0,66,1303	0/1:29,3:26:67.66:68,0,972	0/1:6,0:5:0.09:0,0,1	1/1:0,1:1:3.01:46,3,0	1/1:0,3:3:8.39:105,8,0	./.	1/1:2,3:5:8.96:113,9,0	./.	0/0:1,1:2:0:0,0,0	1/1:5,3:8:8.19:111,8,0	1/1:5,1:6:8.19:63,8,0	1/1:3,4:7:12.47:177,12,0	1/1:5,7:12:7.93:69,8,0	1/1:4,3:7:11.94:225,12,0	1/1:0,1:1:3.01:43,3,0	1/1:1,0:2:3.01:53,3,0	./.	1/1:4,3:7:1.64:55,2,0	./.	1/1:2,1:2:4.24:27,4,0	0/1:2,1:3:28.07:28,0,45	./.	0/0:28,0:28:84.28:0,84,1888	1/1:0,1:1:3.01:53,3,0	1/1:5,0:5:7.88:55,8,0	0/0:1,0:1:3.01:0,3,32
chr10	88724378	.	ACTGT	A	387.64	PASS	AB=0.782;AC=16;AF=0.348;AN=46;BaseQRankSum=5.249;DP=199;FS=36.829;HRun=0;HaplotypeScore=111.8979;InbreedingCoeff=0.1898;MQ=73.09;MQ0=2;MQRankSum=-4.103;QD=6.35;ReadPosRankSum=1.482;VQSLOD=0.3654;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:2,1:3:30.14:34,0,30	0/0:38,0:28:81.28:0,81,2084	0/0:39,0:32:68.97:0,69,2135	0/0:6,0:5:1.23:0,1,4	1/1:1,1:2:5.50:44,6,0	0/1:4,2:6:0.53:62,0,1	./.	0/1:3,1:4:44.75:47,0,45	0/0:1,0:1:3.01:0,3,64	0/0:2,0:2:0:0,0,0	1/1:6,1:7:5.23:47,5,0	0/0:5,1:6:10.83:0,11,106	0/1:5,3:8:72.95:101,0,73	0/1:6,6:12:3.84:33,0,4	1/1:8,0:8:7.79:100,8,0	1/1:0,1:1:3.01:34,3,0	0/0:3,0:3:2.37:0,2,8	./.	1/1:6,1:7:2.59:10,3,0	./.	0/0:4,0:3:5.75:0,6,31	0/1:3,0:3:11.81:12,0,81	./.	0/0:28,0:28:81.27:0,81,2090	0/0:1,0:1:3.01:0,3,54	0/0:3,0:3:3.47:0,3,29	0/0:1,0:1:3.01:0,3,31
chr10	88724382	.	T	TCCA	1582.41	PASS	AB=0.917;AC=29;AF=0.659;AN=44;BaseQRankSum=8.344;DP=181;FS=75.830;HRun=0;HaplotypeScore=96.7428;InbreedingCoeff=0.4440;MQ=73.96;MQ0=1;MQRankSum=-6.706;QD=21.10;ReadPosRankSum=2.348;VQSLOD=0.8044;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,0:3:5.23:64,5,0	0/0:33,0:28:81.26:0,81,1329	0/0:38,0:31:68.48:0,68,1293	0/1:5,0:5:0.01:0,0,0	1/1:1,1:2:6.02:120,6,0	1/1:4,1:6:2.97:176,3,0	./.	1/1:2,1:3:8.92:129,9,0	0/0:1,0:1:2.90:0,3,16	0/0:1,0:1:0:0,0,0	1/1:5,1:6:9.03:191,9,0	1/1:4,1:5:8.35:143,8,0	1/1:7,1:8:15.35:253,15,0	1/1:10,1:11:9.03:190,9,0	1/1:2,4:6:12.04:238,12,0	1/1:2,0:2:3.01:47,3,0	0/0:3,0:3:2.74:0,3,12	./.	1/1:5,2:7:2.72:66,3,0	./.	0/1:4,0:3:6.53:10,0,7	0/1:2,1:3:12.64:54,0,13	./.	0/0:26,0:26:78.02:0,78,1160	./.	1/1:3,0:3:5.27:21,5,0	1/1:1,0:1:2.98:21,3,0
chr10	88724385	.	ACTACAGT	A	839.56	PASS	AB=0.965;AC=24;AF=0.522;AN=46;BaseQRankSum=6.389;DP=200;FS=64.355;HRun=0;HaplotypeScore=124.0800;InbreedingCoeff=0.0465;MQ=71.16;MQ0=1;MQRankSum=-5.551;QD=9.65;ReadPosRankSum=3.380;VQSLOD=-0.1704;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:4,0:4:30.20:30,0,45	0/0:35,0:29:87.30:0,87,3184	0/0:40,0:32:89.52:0,90,2826	0/1:4,0:4:0:0,0,0	0/1:3,0:3:17.45:17,0,51	0/1:5,1:6:37.98:191,0,38	./.	1/1:2,1:3:8.98:106,9,0	0/0:2,0:2:6.02:0,6,78	1/1:2,1:3:2.69:64,3,0	1/1:6,0:6:2.99:42,3,0	0/0:5,0:5:3.50:0,4,22	0/1:6,1:7:8.54:148,0,9	0/1:12,0:12:16.05:31,0,16	0/1:8,0:8:53.17:53,0,58	1/1:2,0:2:5.50:40,6,0	1/1:3,0:3:3.01:37,3,0	./.	0/1:10,1:11:38.22:61,0,38	1/1:2,0:2:0.94:2,1,0	1/1:4,2:5:6.02:133,6,0	0/1:4,0:4:5.28:19,0,5	./.	0/0:27,0:27:75.18:0,75,2633	0/0:2,0:2:6.02:0,6,75	0/1:3,0:3:0.20:5,0,0	./.
chr10	88724387	.	TACA	T	505.47	PASS	AB=0.861;AC=24;AF=0.522;AN=46;BaseQRankSum=6.171;DP=206;FS=47.772;HRun=0;HaplotypeScore=115.3782;InbreedingCoeff=0.1151;MQ=69.96;MQ0=1;MQRankSum=-5.554;QD=5.55;ReadPosRankSum=2.183;VQSLOD=0.7005;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:3,1:4:5.18:31,0,5	0/0:35,0:29:87.30:0,87,2025	0/0:40,1:32:34.48:0,34,1815	0/1:3,0:3:0:0,0,0	1/1:2,1:3:4.02:34,4,0	0/1:5,2:7:5.35:60,0,5	./.	0/1:2,1:3:1.70:44,0,2	0/1:4,0:4:15.07:48,0,15	1/1:3,0:3:5.83:38,6,0	1/1:4,2:6:2.68:38,3,0	0/0:4,1:5:6.07:0,6,18	0/1:4,3:7:1.35:92,0,1	1/1:6,6:12:1.60:35,2,0	1/1:9,0:9:12.94:116,13,0	0/1:1,1:2:12.49:21,0,12	0/0:4,0:4:2.68:0,3,11	./.	0/1:10,1:11:7.96:17,0,8	1/1:5,0:5:0.47:1,0,0	0/1:7,0:6:3.28:15,0,3	0/1:3,0:3:11:11,0,24	./.	0/0:24,0:24:69.21:0,69,1551	1/1:2,0:2:5.91:38,6,0	0/0:4,0:4:1.91:0,2,7	./.
chr10	88724408	.	ACTG	A	238.97	PASS	AB=0.983;AC=14;AF=0.292;AN=48;BaseQRankSum=4.319;DP=284;FS=16.682;HRun=0;HaplotypeScore=135.6519;InbreedingCoeff=-0.2262;MQ=63.90;MQ0=13;MQRankSum=-4.334;QD=2.75;ReadPosRankSum=-0.058;VQSLOD=1.7335;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:4,0:4:38.15:38,0,101	0/0:45,0:28:59.50:0,59,1407	0/0:41,0:26:57.05:0,57,1273	1/1:10,0:8:0.19:2,0,0	0/1:4,0:4:9.15:9,0,94	0/1:9,0:9:13.49:13,0,280	./.	0/1:6,0:6:36.68:37,0,141	0/0:15,0:15:0.96:0,1,569	0/0:11,0:11:3.75:0,4,92	0/1:5,0:5:25.85:26,0,122	0/0:3,0:3:7.26:0,7,86	0/1:6,0:6:96.90:97,0,162	0/1:12,0:12:13.77:14,0,91	0/1:7,1:8:48.23:48,0,174	0/1:2,0:2:6.92:7,0,67	0/0:5,0:5:6.02:0,6,132	0/0:8,0:5:8.75:0,9,56	0/0:15,0:15:0.54:0,1,192	1/1:3,2:5:2.78:52,3,0	0/1:15,1:15:26.79:27,0,188	0/0:8,0:7:3.75:0,4,54	./.	0/0:26,0:26:78.27:0,78,1895	0/0:8,0:8:24.05:0,24,492	0/0:5,0:5:11.05:0,11,204	./.
chr10	88724448	.	ATCTTTGTTGT	A	498.33	PASS	AB=1.000;AC=24;AF=0.545;AN=44;BaseQRankSum=5.268;DP=137;FS=49.270;HRun=0;HaplotypeScore=91.9312;InbreedingCoeff=-0.0266;MQ=65.91;MQ0=4;MQRankSum=-4.683;QD=8.45;ReadPosRankSum=-0.574;VQSLOD=-0.1946;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,0:2:4.56:46,5,0	0/0:21,0:16:20.51:0,21,1538	0/0:18,0:13:18.67:0,19,770	0/0:3,0:2:0.47:0,0,1	0/1:2,0:2:1.02:13,0,1	0/1:2,0:2:5.02:68,0,5	./.	0/1:3,0:3:11.05:11,0,31	1/1:2,0:2:2.96:19,3,0	0/0:1,0:1:2.50:0,2,9	0/1:3,0:3:8.51:9,0,68	1/1:3,0:3:6.82:60,7,0	0/1:4,0:4:9.53:24,0,10	0/1:8,0:8:25.02:25,0,30	0/1:4,0:4:25.93:26,0,44	1/1:2,0:2:3.01:52,3,0	1/1:1,3:4:3.01:40,3,0	./.	0/1:5,0:5:4.35:76,0,4	1/1:2,1:3:0.92:3,1,0	0/1:5,0:5:3.14:24,0,3	./.	./.	0/0:32,0:32:96.32:0,96,4817	1/1:2,0:1:3.01:60,3,0	0/1:5,0:5:31.61:75,0,32	./.
chr10	88724475	.	C	CTCT	388.28	PASS	AC=18;AF=0.692;AN=26;BaseQRankSum=5.024;DP=102;FS=34.006;HRun=0;HaplotypeScore=55.7543;InbreedingCoeff=0.4994;MQ=83.59;MQ0=0;MQRankSum=-4.216;QD=24.27;ReadPosRankSum=-2.598;VQSLOD=1.4433;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,1:1:3.01:71,3,0	0/0:21,0:19:45.60:0,46,732	0/0:23,0:20:43.38:0,43,726	./.	./.	./.	./.	1/1:1,0:1:3.01:36,3,0	./.	./.	0/0:1,0:1:2.94:0,3,18	1/1:0,1:1:3.01:71,3,0	./.	1/1:2,0:2:3.01:48,3,0	1/1:1,1:2:3.01:71,3,0	1/1:1,0:1:2.96:19,3,0	1/1:2,1:3:3.01:71,3,0	./.	1/1:0,1:1:2.94:18,3,0	./.	./.	./.	./.	0/0:34,0:34:96.32:0,96,1661	./.	1/1:2,2:4:8.17:96,8,0	./.
chr10	88724599	.	A	ACTG	1125.76	PASS	AB=0.875;AC=14;AF=0.318;AN=44;BaseQRankSum=3.861;DP=325;FS=3.210;HRun=0;HaplotypeScore=148.3227;InbreedingCoeff=-0.2274;MQ=56.54;MQ0=2;MQRankSum=-2.572;QD=5.69;ReadPosRankSum=3.397;VQSLOD=2.8248;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,2:9:64.37:64,0,76	0/0:9,0:9:14.54:0,15,144	0/0:27,0:19:52.36:0,52,713	0/0:31,0:22:19.24:0,19,539	0/1:17,1:18:66.35:74,0,66	0/1:5,1:6:62.58:63,0,89	0/0:3,0:3:6:0,6,58	0/0:8,3:5:15:0,15,145	./.	0/1:33,3:36:81.88:82,0,607	0/1:17,1:18:52.03:52,0,161	./.	./.	0/0:2,1:3:3.01:0,3,54	0/0:4,0:4:3.01:0,3,47	1/1:0,1:1:3.01:73,3,0	./.	./.	0/0:9,0:7:3.01:0,3,31	0/1:21,2:21:64.52:65,0,159	0/1:10,5:15:80.63:268,0,81	0/1:27,3:30:99:156,0,413	0/1:16,2:18:90.51:91,0,149	./.	0/0:21,0:21:51.15:0,51,917	0/1:15,4:19:99:201,0,288	1/1:1,3:3:3.01:73,3,0	0/0:5,0:5:12.04:0,12,169
chr10	88724626	.	A	ACCACTACTGT	250.75	PASS	AB=1.000;AC=5;AF=0.114;AN=44;BaseQRankSum=-2.068;DP=384;FS=10.611;HRun=0;HaplotypeScore=210.4047;InbreedingCoeff=0.0986;MQ=55.27;MQ0=3;MQRankSum=-1.230;QD=2.24;ReadPosRankSum=-1.658;VQSLOD=1.6959;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:8:1.72:0,2,46	0/0:9,0:9:11.94:0,12,123	0/1:35,0:25:2.32:2,0,280	0/0:49,0:30:9.57:0,10,309	0/0:22,0:22:8.29:0,8,83	0/0:7,0:7:3.81:0,4,19	0/0:4,0:4:2.99:0,3,24	0/0:16,0:13:11.94:0,12,107	./.	0/0:35,0:36:37.05:0,37,601	0/1:19,0:19:3.35:3,0,84	0/0:2,0:2:6.01:0,6,74	0/0:3,0:3:3.01:0,3,43	0/0:5,0:5:3.01:0,3,48	./.	./.	./.	./.	0/0:9,0:7:4.25:0,4,31	0/0:18,0:17:24.23:0,24,201	0/0:20,0:20:3.31:0,3,39	0/1:31,0:31:37.75:38,0,462	0/0:23,0:23:22.42:0,22,184	./.	1/1:8,14:27:6.02:301,6,0	0/0:22,0:22:18.63:0,19,311	0/0:4,0:3:1.25:0,1,3	0/0:6,0:6:9.03:0,9,185
chr10	88724628	.	CACT	C	673.06	PASS	AB=0.927;AC=18;AF=0.375;AN=48;BaseQRankSum=5.787;DP=378;FS=34.395;HRun=0;HaplotypeScore=160.5185;InbreedingCoeff=-0.0888;MQ=54.19;MQ0=3;MQRankSum=-3.794;QD=3.45;ReadPosRankSum=-0.360;VQSLOD=1.4263;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,3:8:8.12:75,8,0	0/1:9,0:9:28.99:29,0,124	0/0:35,0:25:29.61:0,30,1149	0/0:45,1:27:67.36:0,67,1211	0/1:21,1:22:47.83:48,0,130	0/1:6,1:7:56.60:57,0,149	0/0:4,0:4:6.02:0,6,135	0/0:15,0:13:27.09:0,27,594	./.	0/0:35,1:36:12.25:0,12,730	0/1:18,1:19:33.95:34,0,186	0/0:2,0:2:4.26:0,4,13	0/0:3,0:3:2.04:0,2,6	1/1:4,1:5:2.97:20,3,0	0/0:5,0:5:3.01:0,3,30	1/1:0,1:1:3.01:49,3,0	./.	./.	0/0:8,0:6:9.03:0,9,172	0/1:17,1:17:52.45:52,0,353	0/1:15,5:20:70.81:71,0,158	0/1:28,2:31:99:175,0,364	0/1:22,1:23:84.53:85,0,297	./.	0/0:27,0:27:27.09:0,27,569	0/1:18,3:21:66.50:67,0,419	1/1:1,3:3:3.01:48,3,0	0/1:6,0:6:11.89:12,0,86
chr10	88724636	.	T	TCAA	1240.43	PASS	AB=0.948;AC=19;AF=0.380;AN=50;BaseQRankSum=9.262;DP=368;FS=63.370;HRun=0;HaplotypeScore=162.4751;InbreedingCoeff=-0.2217;MQ=59.93;MQ0=1;MQRankSum=-6.955;QD=5.99;ReadPosRankSum=3.474;VQSLOD=0.5427;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,2:8:35.88:36,0,44	0/1:6,0:6:70.80:71,0,93	0/0:31,0:23:62.98:0,63,922	0/0:48,0:30:80.69:0,81,1221	0/1:20,3:23:82.74:172,0,83	0/1:9,0:9:31.18:31,0,112	0/0:6,0:6:6.02:0,6,106	0/0:13,0:13:27.09:0,27,437	./.	0/1:31,1:32:99:285,0,517	0/1:14,0:14:99:122,0,108	1/1:2,0:2:5.85:59,6,0	1/1:3,0:3:2.88:15,3,0	1/1:7,1:8:3.01:41,3,0	0/0:5,0:5:2.68:0,3,11	0/0:1,0:1:2.96:0,3,19	./.	./.	0/0:6,0:5:9.02:0,9,131	0/1:15,0:15:27.33:27,0,388	0/1:20,1:21:26.08:26,0,67	0/1:26,4:30:99:242,0,294	0/1:21,1:22:99:131,0,282	0/1:1,0:1:0:0,0,0	0/0:30,0:30:9.74:0,10,323	0/0:19,0:19:4.28:0,4,392	0/1:6,0:5:41.69:55,0,42	0/1:5,1:6:21.23:72,0,21
chr10	88724643	.	C	CTGT	438.61	PASS	AB=0.968;AC=21;AF=0.420;AN=50;BaseQRankSum=7.044;DP=348;FS=43.601;HRun=0;HaplotypeScore=153.3960;InbreedingCoeff=-0.3194;MQ=67.33;MQ0=1;MQRankSum=-6.862;QD=1.86;ReadPosRankSum=2.876;VQSLOD=1.4413;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:7:4.56:0,5,47	0/1:5,1:6:24.06:24,0,107	0/0:30,0:23:27.44:0,27,852	0/0:49,0:32:70.61:0,71,1040	0/1:20,0:20:87.48:87,0,100	0/1:6,1:7:41.03:41,0,68	0/0:7,0:7:8.98:0,9,107	0/1:12,0:12:21.89:22,0,238	./.	0/1:27,1:28:8.49:8,0,472	0/1:11,0:11:55.04:55,0,72	1/1:3,0:3:3.62:11,4,0	1/1:3,0:3:1.82:5,2,0	0/0:8,0:8:2.80:0,3,13	1/1:5,0:5:2.97:20,3,0	0/1:1,0:1:0:0,0,0	0/0:1,0:1:2.94:0,3,18	./.	0/1:8,0:8:54.88:55,0,91	0/1:11,1:12:38.55:39,0,227	0/1:17,1:18:40.39:40,0,42	0/1:28,0:28:68.49:68,0,283	0/1:20,0:20:35.28:35,0,257	./.	0/1:29,0:29:13.52:14,0,454	0/1:19,1:20:46.14:46,0,264	0/0:6,0:5:3.01:0,3,45	0/1:5,0:5:3.63:5,0,4
chr10	88724646	.	TCCACCAC	T	2856.04	PASS	AB=0.892;AC=28;AF=0.560;AN=50;BaseQRankSum=8.958;DP=331;FS=69.387;HRun=0;HaplotypeScore=150.0016;InbreedingCoeff=-0.2328;MQ=67.41;MQ0=1;MQRankSum=-5.996;QD=13.28;ReadPosRankSum=4.480;VQSLOD=0.0201;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,1:7:6.02:73,6,0	0/1:4,1:5:29.05:29,0,154	0/0:31,0:23:60.25:0,60,1791	0/0:47,0:32:86.99:0,87,2342	0/1:17,2:19:99:304,0,155	0/1:6,1:7:24.29:24,0,66	0/1:7,0:7:74.71:75,0,127	0/1:9,0:9:19.60:20,0,361	./.	0/1:21,7:28:99:626,0,638	0/1:7,4:11:99:135,0,120	1/1:1,2:3:6.02:168,6,0	1/1:0,2:2:3.01:84,3,0	1/1:6,2:8:3.01:36,3,0	1/1:1,4:5:2.97:20,3,0	0/1:1,0:1:0:0,0,0	1/1:1,0:1:2.99:23,3,0	./.	0/1:6,0:6:28.25:28,0,153	0/1:11,1:12:81:81,0,396	0/1:12,4:16:8.10:190,0,8	0/1:24,3:27:99:420,0,482	0/1:17,2:19:99:189,0,458	./.	0/0:29,0:29:45.15:0,45,1126	0/1:13,4:17:99:221,0,314	0/0:5,1:6:2.58:0,3,26	1/1:2,3:5:12.04:260,12,0
chr10	88724653	.	C	CTCT	1606.86	PASS	AB=0.895;AC=31;AF=0.674;AN=46;BaseQRankSum=4.217;DP=277;FS=50.677;HRun=0;HaplotypeScore=129.3116;InbreedingCoeff=0.2903;MQ=79.89;MQ0=1;MQRankSum=-6.244;QD=9.80;ReadPosRankSum=2.450;VQSLOD=1.3990;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:5:27.42:30,0,27	1/1:4,0:4:6:61,6,0	0/0:32,0:24:63.11:0,63,1006	0/0:39,0:29:74.80:0,75,1146	1/1:14,2:16:10.99:156,11,0	1/1:5,1:6:3:33,3,0	1/1:5,1:6:9.01:104,9,0	1/1:6,0:6:8.94:74,9,0	./.	1/1:20,1:21:20.62:223,21,0	1/1:8,1:9:12.02:127,12,0	1/1:3,0:3:5.55:26,6,0	1/1:2,0:2:2.80:13,3,0	1/1:6,1:7:3.01:37,3,0	./.	./.	0/0:1,0:1:2.84:0,3,14	./.	1/1:5,0:5:6.49:80,6,0	1/1:7,2:9:14.71:148,15,0	1/1:8,0:8:0.47:1,0,0	0/1:19,4:23:20.25:265,0,20	0/1:10,5:15:7.94:245,0,8	./.	0/0:28,0:28:38.70:0,39,605	0/1:12,2:14:32.77:104,0,33	0/0:6,0:5:2.74:0,3,36	0/1:5,0:5:4.13:31,0,4
chr10	88724657	.	T	TGTC	3201.70	PASS	AB=0.667;AC=41;AF=0.854;AN=48;BaseQRankSum=8.164;DP=236;FS=88.900;HRun=0;HaplotypeScore=107.3813;InbreedingCoeff=0.3856;MQ=84.19;MQ0=1;MQRankSum=-8.119;QD=23.72;ReadPosRankSum=4.779;VQSLOD=-0.2615;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:2,2:4:13.51:68,0,14	1/1:3,0:3:2.98:22,3,0	0/0:29,0:24:56.37:0,56,1063	0/0:36,0:29:66.74:0,67,1103	1/1:8,6:14:11.62:281,12,0	1/1:2,2:4:3.01:70,3,0	1/1:2,3:5:6.02:144,6,0	1/1:3,1:4:3.01:74,3,0	./.	1/1:9,5:14:39.12:667,39,0	1/1:6,0:6:9.03:205,9,0	1/1:2,1:3:6.02:96,6,0	1/1:2,0:2:3.01:49,3,0	1/1:3,4:7:3.01:73,3,0	./.	./.	1/1:0,1:1:2.94:18,3,0	./.	1/1:1,3:5:6.49:117,6,0	1/1:6,0:6:9.03:131,9,0	1/1:5,2:7:3.01:37,3,0	1/1:12,6:18:8.39:522,8,0	1/1:12,1:13:3.93:319,4,0	1/1:1,1:2:3.01:40,3,0	0/0:30,0:30:50.43:0,50,718	1/1:7,2:9:15.04:212,15,0	1/1:1,2:2:2.99:23,3,0	1/1:4,1:5:12.04:176,12,0
chr10	88724672	.	ACT	A	1161.27	PASS	AB=0.738;AC=27;AF=0.587;AN=46;BaseQRankSum=7.273;DP=227;FS=46.131;HRun=0;HaplotypeScore=105.2207;InbreedingCoeff=0.2796;MQ=93.43;MQ0=0;MQRankSum=-7.434;QD=10.96;ReadPosRankSum=2.464;VQSLOD=1.5406;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,2:3:2.97:20,3,0	./.	0/0:35,0:33:81.22:0,81,1397	0/0:30,0:27:69.21:0,69,1112	1/1:7,6:13:2.81:20,3,0	./.	1/1:1,3:4:6.02:88,6,0	1/1:0,1:1:3.01:44,3,0	0/0:3,1:4:3.01:0,3,39	0/1:6,10:16:72.72:390,0,73	1/1:4,1:5:5.57:39,6,0	1/1:2,2:4:6.02:88,6,0	1/1:2,1:3:3.01:44,3,0	1/1:4,3:7:3.01:44,3,0	./.	0/0:5,0:5:9.03:0,9,118	0/0:0,1:1:2.74:0,3,12	./.	0/1:3,1:4:0:0,0,0	0/1:2,1:3:10.99:11,0,62	1/1:0,6:6:2.97:20,3,0	1/1:8,6:14:4.01:199,4,0	0/1:8,2:10:46.85:47,0,66	./.	0/0:29,0:29:54.18:0,54,985	0/1:5,4:9:99:111,0,106	0/0:4,0:3:5.96:0,6,44	1/1:1,3:4:11.77:144,12,0
chr10	88724674	.	TCTTGTCCAGCACTGTCTACCAC	T	5374.56	PASS	AB=0.967;AC=41;AF=0.788;AN=52;BaseQRankSum=8.063;DP=213;FS=93.026;HRun=0;HaplotypeScore=145.5559;InbreedingCoeff=0.3422;MQ=94.30;MQ0=0;MQRankSum=-9.557;QD=44.79;ReadPosRankSum=1.907;VQSLOD=-0.1073;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:2.97:20,3,0	./.	0/0:33,0:31:90.28:0,90,2725	0/0:29,0:25:75.23:0,75,2268	1/1:11,2:13:11.96:272,12,0	1/1:2,1:3:3.01:98,3,0	1/1:4,0:4:6.02:197,6,0	1/1:1,0:1:3.01:60,3,0	1/1:4,0:4:6.02:194,6,0	1/1:13,2:15:21.18:1164,21,0	1/1:4,0:4:8.59:59,9,0	1/1:3,1:4:6.02:233,6,0	1/1:2,0:2:3.01:120,3,0	1/1:4,3:7:3.01:62,3,0	1/1:6,0:6:9.03:293,9,0	1/1:5,0:5:9.03:291,9,0	1/1:1,0:1:3.01:64,3,0	./.	0/0:1,0:1:0:0,0,0	0/1:3,0:3:10.99:11,0,60	1/1:6,0:6:2.97:20,3,0	1/1:10,1:11:9.53:365,10,0	0/1:9,0:9:56.88:321,0,57	1/1:2,1:3:9.03:252,9,0	0/0:29,0:29:54.18:0,54,3482	0/1:8,1:9:0.88:544,0,1	1/1:1,2:3:9.03:286,9,0	1/1:3,1:4:12.04:449,12,0
chr10	88724696	.	C	CT	2957.30	PASS	AB=0.768;AC=35;AF=0.673;AN=52;BaseQRankSum=5.532;DP=266;FS=51.868;HRun=1;HaplotypeScore=108.0665;InbreedingCoeff=0.1535;MQ=69.94;MQ0=2;MQRankSum=-8.168;QD=19.20;ReadPosRankSum=0.464;VQSLOD=0.4112;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,6:7:6.02:90,6,0	1/1:1,1:2:3.01:45,3,0	0/0:39,0:28:77.19:0,77,946	0/0:37,0:26:57.26:0,57,773	1/1:7,2:9:8.56:134,9,0	1/1:2,3:5:12.04:179,12,0	0/1:4,1:5:22.87:23,0,33	1/1:6,1:7:18.03:240,18,0	1/1:1,3:4:8.99:109,9,0	0/1:12,2:14:99:196,0,123	0/1:3,3:6:12.22:51,0,12	0/0:4,1:5:6.02:0,6,78	0/1:2,4:6:26.83:122,0,27	1/1:6,0:6:3.01:45,3,0	1/1:2,7:9:12.04:179,12,0	1/1:2,7:9:18.06:269,18,0	1/1:1,1:2:6.02:103,6,0	./.	0/1:3,2:3:27.12:81,0,27	./.	0/1:8,2:10:0.11:0,0,0	1/1:9,4:13:17.33:268,17,0	0/1:3,3:6:19.02:126,0,19	1/1:2,2:4:9.03:134,9,0	0/0:25,0:25:60.20:0,60,779	0/1:8,5:13:98.13:335,0,98	1/1:7,2:9:24.08:358,24,0	0/1:3,0:3:35.86:36,0,66
chr10	88724749	.	C	CTGT	253.53	PASS	AB=0.962;AC=10;AF=0.185;AN=54;BaseQRankSum=4.179;DP=328;FS=0.000;HRun=0;HaplotypeScore=154.8219;InbreedingCoeff=-0.0306;MQ=38.37;MQ0=16;MQRankSum=-2.732;QD=2.00;ReadPosRankSum=-1.308;VQSLOD=2.4502;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,2:19:49.27:49,0,159	0/0:2,0:2:6.02:0,6,87	0/0:29,0:10:24.08:0,24,374	0/0:26,0:12:20.75:0,21,307	0/1:8,0:8:0.05:0,0,0	0/0:7,0:7:12.04:0,12,176	0/0:12,0:12:8.98:0,9,100	0/0:9,0:6:9:0,9,99	0/1:9,1:10:91.05:91,0,182	0/0:21,0:20:51.15:0,51,771	0/0:7,0:7:9.61:0,10,86	0/0:7,0:7:6.02:0,6,98	0/0:11,0:11:9.92:0,10,199	0/0:6,0:6:5.73:0,6,116	0/1:16,0:16:89.98:90,0,315	0/1:15,1:16:31.89:32,0,490	0/0:1,0:1:3.01:0,3,50	./.	0/0:10,0:9:17.98:0,18,236	0/0:8,0:8:13.45:0,13,148	0/1:25,0:24:11.62:12,0,44	0/0:13,0:13:17.75:0,18,287	0/0:7,0:7:8.63:0,9,107	0/0:5,0:5:0:0,0,0	0/0:17,0:17:42.14:0,42,700	0/1:16,0:16:22.28:22,0,465	0/1:13,1:14:78.06:78,0,328	1/1:1,0:1:1.82:5,2,0
chr10	88724778	.	ACTG	A	3123.86	PASS	AB=0.959;AC=42;AF=0.778;AN=54;BaseQRankSum=8.056;DP=313;FS=95.762;HRun=0;HaplotypeScore=131.0047;InbreedingCoeff=0.3750;MQ=35.03;MQ0=24;MQRankSum=-4.531;QD=15.31;ReadPosRankSum=4.897;VQSLOD=-0.4611;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,1:16:14.22:140,14,0	1/1:0,1:1:3.01:56,3,0	0/0:36,0:6:17.98:0,18,294	0/0:41,0:10:21:0,21,333	1/1:3,1:4:2.84:52,3,0	1/1:6,0:6:9.02:99,9,0	1/1:8,0:8:4.56:36,5,0	0/1:9,0:9:8.90:9,0,192	1/1:9,0:9:23.88:229,24,0	0/1:15,1:14:22.85:227,0,23	1/1:1,2:3:8.94:102,9,0	1/1:8,0:8:14.98:143,15,0	1/1:13,0:13:28.60:290,29,0	1/1:12,0:12:20.89:210,21,0	1/1:12,0:12:23.71:216,24,0	1/1:15,0:15:41.90:428,42,0	1/1:2,0:2:3.01:33,3,0	1/1:3,0:3:2.46:31,2,0	0/0:7,0:4:8.90:0,9,60	1/1:7,1:8:4.37:42,4,0	0/1:13,0:12:7.01:7,0,31	1/1:5,0:5:11.97:116,12,0	1/1:3,1:4:2.84:52,3,0	./.	0/0:22,0:21:57.18:0,57,1325	0/1:15,2:15:50.74:271,0,51	1/1:19,0:19:45.09:465,45,0	1/1:1,0:1:3.01:35,3,0
chr10	88724779	.	CTGT	C	4852.57	PASS	AB=0.776;AC=46;AF=0.852;AN=54;BaseQRankSum=7.469;DP=305;FS=108.290;HRun=0;HaplotypeScore=122.1669;InbreedingCoeff=0.4473;MQ=31.79;MQ0=26;MQRankSum=-4.800;QD=23.79;ReadPosRankSum=2.886;VQSLOD=1.5065;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,12:16:6.39:192,6,0	1/1:1,0:1:3.01:37,3,0	0/0:36,0:6:15:0,15,220	0/0:42,0:9:18.02:0,18,300	1/1:3,1:4:2.68:34,3,0	1/1:1,4:5:9.03:150,9,0	1/1:2,5:7:5.95:68,6,0	0/1:7,2:9:33.34:33,0,81	1/1:0,9:9:24.08:367,24,0	1/1:8,7:13:21.07:348,21,0	1/1:2,1:3:6.02:84,6,0	1/1:1,7:8:15.05:231,15,0	1/1:2,11:13:32.97:476,33,0	1/1:0,11:11:23.99:346,24,0	1/1:1,11:12:24.07:351,24,0	1/1:1,14:15:42.14:666,42,0	1/1:1,1:2:3.01:50,3,0	1/1:1,2:3:5.93:67,6,0	1/1:6,1:4:0.94:2,1,0	1/1:5,3:8:8.78:54,9,0	0/1:7,4:10:7.50:7,0,19	1/1:0,3:4:9.03:145,9,0	1/1:3,1:4:2.68:33,3,0	./.	0/0:20,0:19:54.19:0,54,1208	1/1:9,8:15:15.85:362,16,0	1/1:0,19:19:45.15:733,45,0	1/1:1,0:1:2.90:16,3,0
chr10	88724792	.	CTGT	C	4752.16	PASS	AB=0.705;AC=41;AF=0.788;AN=52;BaseQRankSum=8.698;DP=304;FS=116.798;HRun=0;HaplotypeScore=125.7248;InbreedingCoeff=0.5269;MQ=50.79;MQ0=23;MQRankSum=-8.375;QD=25.55;ReadPosRankSum=4.232;VQSLOD=1.7915;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:10.71:198,11,0	1/1:1,0:1:2.84:14,3,0	0/0:38,0:12:35.70:0,36,609	0/0:47,0:17:37.71:0,38,632	1/1:1,1:2:0.55:2,1,0	1/1:0,6:6:9.03:150,9,0	1/1:1,4:5:3.01:49,3,0	0/1:5,2:7:57.10:86,0,57	1/1:2,8:10:21.07:320,21,0	1/1:1,7:7:21.03:319,21,0	1/1:2,2:4:3.01:49,3,0	1/1:1,9:10:15.05:235,15,0	1/1:1,14:15:36.12:558,36,0	1/1:0,13:13:27.09:427,27,0	1/1:0,12:12:24.07:350,24,0	1/1:1,16:17:48.16:775,48,0	1/1:0,1:1:3.01:50,3,0	1/1:0,2:2:6.02:100,6,0	./.	0/1:3,4:7:0:0,0,0	0/1:4,3:6:0.29:5,0,0	1/1:2,3:5:6.02:100,6,0	1/1:1,4:5:1.48:5,1,0	./.	0/0:24,0:23:63.17:0,63,1336	1/1:7,9:14:29.78:428,30,0	1/1:2,15:17:33.11:535,33,0	0/0:1,0:1:2.22:0,2,7
chr10	88724924	.	CAT	C	18801.71	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=8.242;DP=634;FS=3.980;HRun=0;HaplotypeScore=172.3946;InbreedingCoeff=0.9963;MQ=64.13;MQ0=1;MQRankSum=-12.178;QD=34.69;ReadPosRankSum=4.639;VQSLOD=6.3120;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:51.64:750,52,0	1/1:1,8:9:21.07:307,21,0	0/0:25,0:24:67.09:0,67,1111	0/0:19,0:19:44.62:0,45,565	1/1:5,16:20:33.07:460,33,0	1/1:3,17:20:42.14:616,42,0	1/1:2,22:24:54.18:794,54,0	1/1:1,23:24:66.16:925,66,0	1/1:1,22:23:63.21:924,63,0	1/1:3,30:33:90.30:1323,90,0	1/1:2,22:24:48.16:704,48,0	1/1:0,17:17:45.15:660,45,0	1/1:0,21:21:51.14:725,51,0	1/1:0,17:17:39.13:572,39,0	1/1:1,24:25:54.18:792,54,0	1/1:2,34:36:99:1496,102,0	1/1:0,17:17:45.15:662,45,0	1/1:0,9:9:21.07:309,21,0	1/1:0,14:14:42.07:558,42,0	1/1:1,21:22:51.17:748,51,0	1/1:2,13:15:30.10:441,30,0	1/1:2,30:32:72.24:1056,72,0	1/1:3,19:22:54.18:792,54,0	1/1:1,20:21:33.58:486,34,0	0/0:48,0:48:99:0,135,2457	1/1:5,32:37:99:1467,102,0	1/1:1,26:27:57.19:837,57,0	1/1:0,10:10:27.09:397,27,0
chr10	88725098	.	T	TAC	4776.81	PASS	AB=1.000;AC=49;AF=0.907;AN=54;BaseQRankSum=8.678;DP=587;FS=7.638;HRun=0;HaplotypeScore=241.1321;InbreedingCoeff=0.4317;MQ=57.73;MQ0=4;MQRankSum=-7.305;QD=8.83;ReadPosRankSum=2.394;VQSLOD=3.2284;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,3:27:10.75:125,11,0	./.	0/0:21,0:17:6.78:0,7,461	0/0:20,0:18:45.15:0,45,591	1/1:17,2:18:12.01:135,12,0	1/1:25,1:26:17.49:156,17,0	1/1:22,0:21:11.93:119,12,0	1/1:55,0:48:74.83:650,75,0	1/1:23,6:30:14.39:151,14,0	1/1:24,6:29:40.53:487,41,0	1/1:9,5:13:3.01:45,3,0	1/1:18,2:20:17.53:184,18,0	1/1:19,3:22:11.53:138,12,0	1/1:20,1:21:17.97:194,18,0	1/1:8,15:22:15.05:214,15,0	1/1:18,12:30:23.53:275,24,0	1/1:11,0:11:12.96:55,13,0	1/1:10,3:13:11.05:134,11,0	1/1:18,7:25:56.57:604,57,0	1/1:6,0:6:3:27,3,0	1/1:25,1:26:4.62:31,5,0	1/1:12,1:13:3:29,3,0	1/1:8,0:8:5.87:49,6,0	1/1:12,5:17:17.78:214,18,0	0/1:29,0:29:76.09:76,0,379	1/1:26,5:31:64.32:565,64,0	1/1:5,8:13:8.29:108,8,0	1/1:8,2:8:2.68:11,3,0
chr10	88725102	.	C	CACAT	4263.80	PASS	AB=0.987;AC=35;AF=0.795;AN=44;BaseQRankSum=-1.322;DP=629;FS=7.901;HRun=0;HaplotypeScore=278.3039;InbreedingCoeff=0.1646;MQ=53.83;MQ0=4;MQRankSum=-1.881;QD=7.95;ReadPosRankSum=2.870;VQSLOD=2.0250;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:29:1.88:30,0,2	./.	./.	./.	0/0:20,0:19:0:0,0,0	1/1:25,0:25:14.74:200,15,0	0/1:20,0:19:0.12:0,0,0	1/1:74,0:67:19.06:102,19,0	1/1:30,0:30:12:169,12,0	1/1:32,0:31:49.96:746,50,0	./.	1/1:22,0:22:12:131,12,0	1/1:24,0:24:3.01:33,3,0	1/1:23,0:23:9.01:105,9,0	0/1:26,0:25:3.83:181,0,4	1/1:30,0:30:21.05:230,21,0	1/1:13,0:13:5.94:43,6,0	1/1:16,0:16:13.88:100,14,0	1/1:28,0:28:23.04:223,23,0	./.	1/1:29,0:29:8.97:95,9,0	1/1:14,0:14:5.99:49,6,0	0/0:8,0:8:0:0,0,0	0/1:19,0:19:1.67:182,0,2	1/1:12,19:32:36.12:840,36,0	1/1:32,0:32:48.09:661,48,0	0/1:18,0:18:3.87:144,0,4	./.
chr10	88725104	.	CAT	C	2043.09	PASS	AB=0.797;AC=35;AF=0.648;AN=54;BaseQRankSum=11.017;DP=625;FS=6.726;HRun=0;HaplotypeScore=216.3293;InbreedingCoeff=0.0880;MQ=51.61;MQ0=4;MQRankSum=-5.453;QD=4.01;ReadPosRankSum=4.065;VQSLOD=1.7534;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,11:30:36.30:86,0,36	./.	0/0:19,0:15:6.78:0,7,461	0/0:17,0:15:45.15:0,45,591	1/1:15,3:17:12.01:135,12,0	0/1:18,7:25:37.77:41,0,38	1/1:12,8:19:12.40:120,12,0	0/1:45,30:68:99:445,0,338	0/1:23,8:31:37.15:42,0,37	0/1:28,4:31:10.62:11,0,634	1/1:12,1:12:3.01:45,3,0	0/1:17,5:22:90.18:102,0,90	1/1:3,21:24:10.55:102,11,0	1/1:17,7:24:10.38:118,10,0	1/1:20,3:22:16.25:75,16,0	1/1:13,18:31:4.48:49,4,0	0/1:10,3:13:21.19:21,0,37	0/1:13,4:17:66.49:66,0,73	1/1:19,9:28:51.44:354,51,0	1/1:4,0:4:3:27,3,0	0/0:23,5:28:1.88:0,2,71	0/0:14,0:14:5.64:0,6,79	1/1:5,2:7:5.99:50,6,0	1/1:16,3:19:11.13:64,11,0	0/0:32,0:32:72.21:0,72,962	0/1:26,7:33:99:144,0,480	1/1:13,4:17:18.71:106,19,0	1/1:4,0:2:2.68:11,3,0
chr10	88725106	.	T	TAC	1635.90	PASS	AB=0.927;AC=30;AF=0.556;AN=54;BaseQRankSum=11.666;DP=628;FS=9.656;HRun=0;HaplotypeScore=222.7635;InbreedingCoeff=-0.0428;MQ=49.67;MQ0=4;MQRankSum=-5.663;QD=3.20;ReadPosRankSum=7.421;VQSLOD=0.8016;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,4:30:8.03:8,0,26	./.	0/0:17,0:13:10.29:0,10,402	0/0:17,0:15:39.10:0,39,529	0/0:16,1:16:1.70:0,2,4	0/1:24,1:25:3.93:4,0,29	1/1:20,0:19:0.44:2,0,0	0/1:76,0:69:99:288,0,467	0/0:30,2:32:8.72:0,9,95	0/1:28,6:33:99:158,0,450	0/0:10,3:12:0.89:0,1,2	0/1:20,3:23:21.24:21,0,76	1/1:21,3:24:4.28:55,4,0	1/1:24,1:25:3.62:25,4,0	1/1:19,5:23:18.92:191,19,0	1/1:22,10:32:21.78:217,22,0	0/1:11,0:11:1.53:2,0,27	0/1:14,3:17:20.15:20,0,92	0/1:22,5:27:57.57:271,0,58	1/1:4,0:4:2.98:21,3,0	0/1:27,1:28:22.41:22,0,66	0/0:14,1:15:5.84:0,6,74	1/1:7,0:7:2.73:19,3,0	1/1:15,5:20:14.93:143,15,0	0/1:31,0:31:84.44:84,0,304	0/1:29,4:33:99:197,0,346	0/1:17,0:17:6.90:25,0,7	1/1:4,0:2:2.90:16,3,0
chr10	88725108	.	CAT	C	522.41	PASS	AB=0.987;AC=24;AF=0.462;AN=52;BaseQRankSum=9.350;DP=627;FS=6.588;HRun=0;HaplotypeScore=226.9092;InbreedingCoeff=0.0199;MQ=48.24;MQ0=5;MQRankSum=-5.236;QD=1.29;ReadPosRankSum=3.460;VQSLOD=1.8060;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,2:30:3.62:4,0,65	./.	0/0:18,0:13:10.29:0,10,402	0/0:16,0:14:39.10:0,39,529	0/0:15,0:14:0.47:0,0,1	0/0:25,0:25:5.88:0,6,94	0/0:20,1:20:1.75:0,2,40	0/1:74,3:69:99:153,0,1043	0/0:30,0:30:11.28:0,11,166	0/0:35,0:34:8.98:0,9,931	./.	0/1:22,0:22:19.56:20,0,191	1/1:24,0:24:0.60:20,1,0	1/1:26,0:26:5.17:28,5,0	1/1:24,0:23:3.08:58,3,0	0/1:32,0:32:7.35:20,0,7	0/1:12,0:12:1.52:2,0,51	0/1:17,0:17:12.99:13,0,185	0/1:27,1:28:60.63:124,0,61	1/1:4,0:4:2.98:21,3,0	0/1:29,0:29:22.08:22,0,145	0/0:16,0:16:8.67:0,9,157	1/1:7,0:7:2.96:19,3,0	0/1:20,0:20:8.63:27,0,9	0/0:29,0:29:63.18:0,63,873	0/1:32,0:32:26.95:27,0,706	1/1:18,0:18:4.06:96,4,0	1/1:3,1:2:2.90:16,3,0
chr10	88725110	.	T	TACACACACAC	6476.76	PASS	AB=0.987;AC=29;AF=0.580;AN=50;BaseQRankSum=12.014;DP=627;FS=8.820;HRun=0;HaplotypeScore=267.0395;InbreedingCoeff=0.0246;MQ=43.92;MQ0=2;MQRankSum=-6.073;QD=13.24;ReadPosRankSum=4.209;VQSLOD=2.2049;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:71.55:72,0,103	./.	0/0:18,0:11:20.48:0,20,601	0/0:14,0:12:36.10:0,36,875	./.	0/1:25,0:25:1.22:1,0,46	0/1:22,0:21:16.05:21,0,16	0/1:79,0:71:99:555,0,627	0/0:31,0:31:13.74:0,14,141	0/1:35,0:34:99:509,0,790	./.	0/1:24,0:24:33.47:33,0,193	1/1:21,1:24:8.89:180,9,0	1/1:24,0:25:0.88:2,1,0	1/1:18,4:23:27.09:979,27,0	1/1:21,6:31:29.29:998,29,0	0/1:12,0:12:45.24:95,0,45	0/1:17,0:17:70.68:71,0,143	0/1:24,1:29:50.96:874,0,51	1/1:4,0:4:3:26,3,0	0/1:29,0:29:27.44:27,0,128	0/0:16,0:16:8.85:0,9,112	1/1:6,0:6:0.41:1,0,0	1/1:16,4:21:22.06:792,22,0	0/0:28,0:28:59.96:0,60,937	0/1:32,0:32:99:315,0,593	1/1:18,0:18:38.74:915,39,0	1/1:3,0:3:2.60:10,3,0
chr10	88725112	.	CAT	C	685.19	PASS	AB=0.838;AC=23;AF=0.460;AN=50;BaseQRankSum=8.543;DP=632;FS=2.876;HRun=0;HaplotypeScore=228.7898;InbreedingCoeff=-0.1546;MQ=41.39;MQ0=4;MQRankSum=-4.352;QD=1.59;ReadPosRankSum=0.166;VQSLOD=2.5221;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,10:30:4.42:4,0,98	./.	0/0:20,0:10:1.45:0,1,316	0/0:14,0:12:36.10:0,36,494	./.	0/0:18,7:25:2.82:0,3,132	0/1:15,6:20:1.93:2,0,108	0/1:56,25:73:99:137,0,1527	0/0:23,8:31:13.43:0,13,203	0/0:32,3:34:19.14:0,19,1114	./.	0/1:19,5:24:33.43:33,0,229	1/1:18,6:24:0.51:17,1,0	1/1:19,6:25:4.35:28,4,0	0/1:19,3:22:7.01:49,0,7	0/1:25,5:30:22.17:22,0,38	0/1:9,3:12:12.64:13,0,74	0/1:14,4:18:43.82:44,0,201	0/1:21,7:28:99:169,0,121	1/1:4,0:4:3:27,3,0	0/1:27,3:30:20.08:20,0,183	0/0:17,0:17:8.67:0,9,158	1/1:4,2:6:3:25,3,0	0/1:20,3:23:13.22:51,0,13	0/0:28,0:28:60.20:0,60,852	0/1:27,7:34:68.22:68,0,824	1/1:12,4:16:13.22:118,13,0	0/1:3,0:3:4.37:4,0,35
chr10	88725594	.	G	GGTGATTGAACA	42070.83	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=5.982;DP=418;FS=16.630;HRun=0;HaplotypeScore=146.2484;InbreedingCoeff=0.8671;MQ=89.09;MQ0=0;MQRankSum=-12.625;QD=121.59;ReadPosRankSum=2.378;VQSLOD=4.4185;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,9:25:63.22:3113,63,0	1/1:4,0:4:6.02:224,6,0	0/0:23,0:23:69.22:0,69,2022	0/0:21,0:21:60.19:0,60,2021	1/1:1,0:1:3.01:69,3,0	1/1:3,4:10:18.06:942,18,0	1/1:13,6:21:51.18:2374,51,0	1/1:15,5:18:51.17:2074,51,0	1/1:7,11:20:51.18:2866,51,0	1/1:3,9:16:48.11:1936,48,0	1/1:6,2:11:15.05:712,15,0	1/1:3,10:14:39.13:2046,39,0	1/1:8,7:15:45.15:2235,45,0	1/1:5,15:20:54.18:2770,54,0	1/1:10,11:21:57.20:3041,57,0	1/1:2,13:16:45.15:2570,45,0	1/1:2,3:6:15.05:744,15,0	1/1:3,2:5:15.05:864,15,0	1/1:15,8:24:54.18:2715,54,0	1/1:4,4:10:21.07:987,21,0	1/1:1,5:7:15.05:862,15,0	1/1:2,8:10:27.09:1405,27,0	1/1:2,8:14:30.10:1487,30,0	1/1:9,12:22:51.17:2467,51,0	0/0:28,0:28:75.24:0,75,2392	1/1:10,4:15:39.12:1729,39,0	1/1:6,5:12:30.10:1329,30,0	1/1:2,1:6:9.03:510,9,0
chr10	88725721	.	C	CT	19972.01	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=9.930;DP=579;FS=3.083;HRun=1;HaplotypeScore=186.8514;InbreedingCoeff=0.9989;MQ=50.86;MQ0=5;MQRankSum=-7.051;QD=39.55;ReadPosRankSum=5.090;VQSLOD=4.2033;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:35:90.22:1296,90,0	1/1:0,9:9:27.09:404,27,0	0/0:31,0:27:78.17:0,78,957	0/0:19,0:17:36.93:0,37,463	1/1:0,19:19:45.15:674,45,0	1/1:0,14:14:39.13:584,39,0	1/1:1,24:21:51.13:738,51,0	1/1:0,13:12:33.11:477,33,0	1/1:2,23:25:69.23:1032,69,0	1/1:2,26:28:81.24:1160,81,0	1/1:2,9:11:27.09:404,27,0	1/1:3,21:24:66.22:987,66,0	1/1:1,24:24:69.20:1009,69,0	1/1:2,20:22:60.20:898,60,0	1/1:0,23:23:69.23:1033,69,0	1/1:2,22:24:63.18:919,63,0	1/1:1,21:21:63.18:919,63,0	1/1:2,18:20:54.18:809,54,0	1/1:3,10:11:30.10:437,30,0	1/1:1,22:23:66.18:963,66,0	1/1:4,15:19:45.14:654,45,0	1/1:0,16:16:42.14:629,42,0	1/1:4,14:18:48.03:643,48,0	1/1:0,20:20:54.14:766,54,0	0/0:24,0:24:69.21:0,69,881	1/1:0,23:23:69.22:1013,69,0	1/1:0,22:22:66.22:986,66,0	1/1:0,12:12:36.12:539,36,0
chr10	88725799	.	TGA	T	11140.95	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=8.315;DP=444;FS=0.656;HRun=0;HaplotypeScore=138.3912;InbreedingCoeff=0.9333;MQ=36.50;MQ0=15;MQRankSum=-5.420;QD=30.36;ReadPosRankSum=3.686;VQSLOD=6.7583;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:39.13:558,39,0	1/1:0,6:6:12.04:172,12,0	0/0:31,0:10:30.09:0,30,499	0/0:32,0:13:39.13:0,39,714	1/1:3,8:11:18.06:258,18,0	1/1:0,8:8:21.07:301,21,0	1/1:3,12:14:24.08:338,24,0	1/1:2,14:9:21.07:301,21,0	1/1:1,15:16:45.15:644,45,0	1/1:2,16:17:48.16:685,48,0	1/1:1,13:14:30.10:429,30,0	1/1:2,15:17:42.14:601,42,0	1/1:0,10:10:27.06:364,27,0	1/1:0,18:18:51.17:730,51,0	1/1:2,23:25:63.21:901,63,0	1/1:0,16:16:45.14:626,45,0	1/1:1,16:17:39.09:535,39,0	1/1:1,12:13:36.12:516,36,0	1/1:0,8:7:21.07:301,21,0	1/1:1,9:10:12.04:172,12,0	1/1:3,18:21:30.02:417,30,0	1/1:3,18:20:45.07:597,45,0	1/1:4,15:19:27.05:364,27,0	1/1:3,10:13:21.07:300,21,0	0/0:14,0:14:42.14:0,42,767	1/1:2,10:12:30.10:430,30,0	1/1:0,13:13:36.12:515,36,0	1/1:0,5:5:6.02:86,6,0
chr10	88725840	.	C	CT	15622.26	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=10.770;DP=540;FS=1.853;HRun=1;HaplotypeScore=183.0657;InbreedingCoeff=0.9098;MQ=40.31;MQ0=8;MQRankSum=-4.929;QD=33.60;ReadPosRankSum=3.651;VQSLOD=4.5494;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,35:38:84.21:1208,84,0	1/1:0,7:7:8.82:135,9,0	0/0:26,0:11:30.09:0,30,376	0/0:27,0:19:54.14:0,54,682	1/1:3,14:17:32.93:444,33,0	1/1:1,13:14:42.10:604,42,0	1/1:4,15:19:45.11:642,45,0	1/1:4,11:13:33.07:469,33,0	1/1:3,15:18:48.12:694,48,0	1/1:5,25:30:87.23:1243,87,0	1/1:1,16:17:27.09:404,27,0	1/1:2,14:16:42.10:604,42,0	1/1:2,13:15:42.06:579,42,0	1/1:5,18:23:54.17:789,54,0	1/1:0,25:25:75.21:1098,75,0	1/1:3,22:25:63.21:943,63,0	1/1:2,10:11:27.08:384,27,0	1/1:4,11:15:2.01:436,2,0	1/1:3,11:14:30.09:434,30,0	1/1:1,13:14:30.10:449,30,0	1/1:0,24:24:44.98:623,45,0	1/1:1,22:22:51.04:688,51,0	1/1:4,15:18:29.94:350,30,0	1/1:2,14:16:36.10:517,36,0	0/0:22,0:22:66.19:0,66,840	1/1:0,15:15:45.15:674,45,0	1/1:2,22:24:60.20:898,60,0	1/1:0,10:10:21.07:314,21,0
chr10	88725929	.	T	TACCACTCCCTGG	53693.59	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=10.588;DP=508;FS=0.475;HRun=0;HaplotypeScore=239.3061;InbreedingCoeff=0.9725;MQ=51.83;MQ0=1;MQRankSum=-12.306;QD=126.64;ReadPosRankSum=1.908;VQSLOD=4.7001;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,13:42:99:5616,111,0	1/1:6,1:7:15.05:810,15,0	0/0:30,0:28:81.24:0,81,2905	0/0:27,0:26:60.20:0,60,2149	1/1:8,4:12:15.05:942,15,0	1/1:7,12:19:54.17:3060,54,0	1/1:11,6:17:36.11:1850,36,0	1/1:11,2:12:35.97:1155,36,0	1/1:15,6:21:63.22:3154,63,0	1/1:12,6:17:48.12:2478,48,0	1/1:6,4:10:11.97:586,12,0	1/1:11,10:21:60.13:3162,60,0	1/1:5,7:12:33.07:1770,33,0	1/1:15,12:28:81.21:4235,81,0	1/1:8,9:17:51.18:2980,51,0	1/1:14,8:22:66.14:3354,66,0	1/1:8,5:13:33.11:2086,33,0	1/1:8,1:9:20.97:843,21,0	1/1:10,1:11:26.84:991,27,0	1/1:11,7:18:39.05:1731,39,0	1/1:15,1:16:27.04:1258,27,0	1/1:7,3:10:21.07:1211,21,0	1/1:12,11:23:30.09:1732,30,0	1/1:11,10:21:41.80:2434,42,0	0/0:26,0:26:78.20:0,78,2700	1/1:7,8:15:45.15:2673,45,0	1/1:13,7:21:54.06:2631,54,0	1/1:5,3:8:20.96:952,21,0
chr10	88725936	.	C	CAT	14901.06	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=10.299;DP=421;FS=1.586;HRun=0;HaplotypeScore=171.2068;InbreedingCoeff=0.9532;MQ=62.83;MQ0=1;MQRankSum=-11.831;QD=44.48;ReadPosRankSum=1.574;VQSLOD=5.0387;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,23:28:81.22:1381,81,0	1/1:0,4:4:6.02:112,6,0	0/0:33,0:31:87.02:0,87,1242	0/0:28,0:27:66.20:0,66,916	1/1:1,9:10:27.08:461,27,0	1/1:2,13:15:42.14:759,42,0	1/1:5,9:14:24.03:401,24,0	1/1:3,7:11:33.06:502,33,0	1/1:1,11:12:33.11:614,33,0	1/1:1,10:11:29.84:515,30,0	1/1:2,7:9:20.80:319,21,0	1/1:1,14:15:42.14:782,42,0	1/1:3,8:11:30.10:547,30,0	1/1:3,16:19:54.17:970,54,0	1/1:0,13:13:36.12:667,36,0	1/1:2,12:14:36.12:670,36,0	1/1:0,10:10:21.07:391,21,0	1/1:1,6:7:21.07:387,21,0	1/1:2,6:8:21.03:354,21,0	1/1:2,13:15:33.11:589,33,0	1/1:0,11:11:27.09:486,27,0	1/1:4,12:16:36.12:656,36,0	1/1:2,23:25:48.16:847,48,0	1/1:5,17:22:47.82:802,48,0	0/0:25,0:25:72.22:0,72,1021	1/1:0,15:15:45.15:837,45,0	1/1:4,10:14:30.10:549,30,0	1/1:1,5:6:18.04:303,18,0
chr10	88726699	.	C	CT	13837.95	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-2.891;DP=719;FS=0.585;HRun=4;HaplotypeScore=165.8580;InbreedingCoeff=0.9914;MQ=66.44;MQ0=0;MQRankSum=-1.388;QD=35.57;ReadPosRankSum=0.843;VQSLOD=3.1190;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,135,1518	0/0:9,0:9:27.08:0,27,306	0/0:24,0:24:72.16:0,72,784	0/0:25,0:25:66.66:0,67,747	1/1:3,30:33:84.24:1128,84,0	1/1:3,26:29:75.25:1025,75,0	1/1:2,26:28:66.18:881,66,0	0/0:26,0:26:60.17:0,60,679	0/0:23,1:24:22.15:0,22,606	0/0:23,0:23:66.18:0,66,742	0/0:25,0:25:72.19:0,72,807	1/1:2,23:25:69.23:940,69,0	1/1:2,22:24:66.21:901,66,0	1/1:0,27:27:69.19:922,69,0	1/1:1,32:33:84.28:1148,84,0	1/1:1,29:30:56.26:1155,56,0	0/0:33,0:33:90.24:0,90,1009	1/1:0,19:19:54.18:738,54,0	1/1:9,14:22:57.06:701,57,0	1/1:0,25:25:72.24:985,72,0	0/0:32,0:32:84.22:0,84,940	1/1:3,34:37:99:1395,102,0	1/1:1,16:17:45.15:616,45,0	1/1:0,21:21:54.14:717,54,0	0/0:21,0:21:57.16:0,57,646	0/0:32,0:32:84.24:0,84,953	1/1:3,15:17:45.10:585,45,0	0/0:5,0:5:9.02:0,9,102
chr10	88728146	.	ACT	A	6013.45	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=8.259;DP=300;FS=46.856;HRun=0;HaplotypeScore=87.4059;InbreedingCoeff=0.9014;MQ=103.19;MQ0=0;MQRankSum=-10.912;QD=25.81;ReadPosRankSum=5.187;VQSLOD=3.4254;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:6:15.05:245,15,0	1/1:6,0:6:18.04:189,18,0	0/0:23,0:23:68.26:0,68,1262	0/0:21,0:21:63:0,63,1210	1/1:10,0:10:24.03:239,24,0	1/1:11,0:11:24.06:253,24,0	1/1:12,0:12:33:307,33,0	1/1:13,0:13:38.91:321,39,0	1/1:0,7:7:18.06:293,18,0	1/1:9,0:9:26.96:258,27,0	1/1:12,0:12:36.02:343,36,0	1/1:7,0:7:15.04:156,15,0	1/1:4,0:4:8.99:75,9,0	1/1:8,0:8:21.03:205,21,0	1/1:12,0:12:33.05:325,33,0	1/1:7,0:7:18.03:183,18,0	1/1:6,0:6:15.02:147,15,0	1/1:8,0:8:21.03:204,21,0	1/1:15,0:15:7.01:224,7,0	1/1:12,0:12:33.07:338,33,0	1/1:15,0:15:33.03:313,33,0	1/1:14,0:14:42.07:424,42,0	1/1:8,0:8:21.03:214,21,0	1/1:9,0:9:15.03:154,15,0	0/0:23,0:23:69.24:0,69,1386	1/1:12,0:12:32.97:304,33,0	1/1:6,0:6:15.04:166,15,0	1/1:4,0:4:12.02:133,12,0
chr10	88728147	.	CTT	C	9458.46	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=6.148;DP=291;FS=48.377;HRun=2;HaplotypeScore=71.8030;InbreedingCoeff=0.9285;MQ=104.67;MQ0=0;MQRankSum=-10.557;QD=42.23;ReadPosRankSum=5.209;VQSLOD=1.9799;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:15.02:145,15,0	1/1:0,6:6:18.06:292,18,0	0/0:22,0:23:66:0,66,1237	0/0:21,0:21:62.97:0,63,1190	1/1:0,10:10:24.08:390,24,0	1/1:0,11:11:24.08:390,24,0	1/1:0,11:11:33.11:537,33,0	1/1:0,13:13:39.13:635,39,0	1/1:7,0:7:18.01:168,18,0	1/1:0,9:9:27.09:437,27,0	1/1:0,12:12:36.12:585,36,0	1/1:0,5:5:15.05:242,15,0	1/1:0,4:4:9.03:147,9,0	1/1:0,8:8:21.07:338,21,0	1/1:0,12:12:33.11:536,33,0	1/1:0,6:6:18.06:292,18,0	1/1:0,6:6:15.05:244,15,0	1/1:0,8:8:21.07:342,21,0	1/1:0,13:13:27.09:439,27,0	1/1:0,11:11:33.11:535,33,0	1/1:0,14:14:33.11:537,33,0	1/1:0,14:14:42.14:680,42,0	1/1:1,7:8:21.07:340,21,0	1/1:0,9:9:15.05:244,15,0	0/0:23,0:23:69.23:0,69,1357	1/1:0,12:12:33.11:533,33,0	1/1:0,5:5:15.05:242,15,0	1/1:0,4:4:12.04:189,12,0
chr10	88728340	.	G	GT	6528.29	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=12.506;DP=325;FS=21.518;HRun=0;HaplotypeScore=133.2595;InbreedingCoeff=0.8085;MQ=103.06;MQ0=0;MQRankSum=-12.638;QD=26.98;ReadPosRankSum=6.372;VQSLOD=3.3146;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:24.04:258,24,0	1/1:1,0:1:2.99:24,3,0	0/0:31,0:31:93.11:0,93,1238	0/0:22,0:22:55.40:0,55,727	1/1:1,3:4:9.02:110,9,0	1/1:5,17:22:45.09:474,45,0	1/1:1,11:12:27.06:296,27,0	1/1:3,8:11:15.28:277,15,0	1/1:0,12:12:36.08:383,36,0	1/1:0,12:12:36.10:398,36,0	./.	1/1:0,12:12:33.03:323,33,0	1/1:0,6:6:15.03:169,15,0	1/1:1,12:13:39.06:386,39,0	1/1:1,17:18:42.11:482,42,0	1/1:1,13:14:36.09:406,36,0	1/1:1,3:4:5.98:51,6,0	1/1:0,1:1:3.01:30,3,0	1/1:0,10:10:24.07:268,24,0	1/1:1,4:7:9.02:92,9,0	1/1:1,10:11:23.88:253,24,0	1/1:0,11:11:33.07:352,33,0	1/1:0,8:8:24.05:243,24,0	1/1:1,6:7:21.02:215,21,0	0/0:27,0:27:81.25:0,81,1113	1/1:0,9:9:27.07:306,27,0	1/1:1,19:19:45.11:489,45,0	1/1:0,6:6:18.05:241,18,0
chr10	88728341	.	C	CAGTAGGGT	26899.78	PASS	AB=0.833;AC=45;AF=0.865;AN=52;BaseQRankSum=11.431;DP=405;FS=10.031;HRun=0;HaplotypeScore=154.0642;InbreedingCoeff=0.8091;MQ=92.31;MQ0=0;MQRankSum=-12.592;QD=83.80;ReadPosRankSum=4.068;VQSLOD=4.9584;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,8:13:24.08:868,24,0	./.	0/0:31,0:31:87.25:0,87,2250	0/0:21,0:21:49.71:0,50,1285	1/1:4,3:7:12.04:440,12,0	1/1:11,17:28:57.18:1981,57,0	1/1:8,9:17:39.12:1312,39,0	1/1:12,8:20:60.19:2101,60,0	1/1:4,11:15:45.14:1499,45,0	1/1:5,12:17:48.12:1725,48,0	./.	1/1:4,12:16:42.14:1431,42,0	1/1:6,5:11:27.08:803,27,0	1/1:3,12:15:42.14:1572,42,0	1/1:7,12:19:48.15:1587,48,0	1/1:5,11:16:45.13:1451,45,0	1/1:3,2:5:9.03:319,9,0	0/1:4,1:5:8.09:204,0,8	1/1:3,10:13:30.09:1082,30,0	1/1:3,4:7:9.03:349,9,0	1/1:11,8:19:36.11:1174,36,0	1/1:3,10:13:36.12:1330,36,0	1/1:0,8:8:24.08:928,24,0	1/1:4,6:10:21.07:806,21,0	0/0:27,0:27:78.25:0,78,2142	1/1:5,8:13:36.12:1270,36,0	1/1:10,17:26:60.21:2101,60,0	1/1:4,3:7:18.06:565,18,0
chr10	88728741	.	A	AAT	8151.51	PASS	AB=0.955;AC=31;AF=0.554;AN=56;BaseQRankSum=6.156;DP=536;FS=89.344;HRun=0;HaplotypeScore=129.5480;InbreedingCoeff=-0.2858;MQ=57.07;MQ0=22;MQRankSum=-5.815;QD=18.83;ReadPosRankSum=3.894;VQSLOD=1.4080;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,1:29:47.46:642,0,47	0/1:4,5:10:34.10:141,0,34	0/0:26,0:15:30.86:0,31,396	0/0:42,0:13:30.54:0,31,415	1/1:23,0:23:36:493,36,0	0/1:19,0:18:99:331,0,113	1/1:18,0:18:0.77:374,1,0	1/1:14,0:14:34:447,34,0	0/1:20,0:20:99:313,0,143	1/1:31,0:31:3.10:840,3,0	0/1:11,0:11:32.13:105,0,32	0/1:17,0:16:99:294,0,112	0/1:19,0:19:99:308,0,179	0/1:17,0:17:14.99:397,0,15	0/1:25,0:25:57.59:58,0,133	0/1:19,0:18:10.94:383,0,11	0/1:11,12:23:80.01:80,0,145	0/1:11,0:9:63.06:63,0,131	0/1:16,0:15:48.63:490,0,49	0/1:15,0:15:99:258,0,132	1/1:18,0:17:11.60:83,12,0	0/1:22,0:21:37.47:486,0,37	0/1:14,0:14:17.01:312,0,17	0/0:15,0:14:8.01:0,8,141	0/0:20,0:20:54.16:0,54,793	1/1:19,0:19:48.14:697,48,0	0/1:12,0:11:28.80:302,0,29	1/1:6,0:7:21.01:256,21,0
chr10	88728743	.	A	AAT	4916.55	PASS	AB=0.974;AC=34;AF=0.607;AN=56;BaseQRankSum=6.812;DP=521;FS=48.846;HRun=0;HaplotypeScore=141.7860;InbreedingCoeff=-0.0892;MQ=60.52;MQ0=20;MQRankSum=-3.933;QD=11.76;ReadPosRankSum=3.931;VQSLOD=2.2113;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,1:24:11.69:440,12,0	0/1:8,2:10:33.57:121,0,34	0/0:27,0:16:17.77:0,18,415	0/0:44,0:15:36.07:0,36,460	1/1:24,0:24:36.21:274,36,0	0/1:20,0:19:93.80:169,0,94	1/1:17,1:18:4.32:208,4,0	1/1:15,0:15:37.93:244,38,0	0/1:15,2:17:75.91:205,0,76	1/1:27,3:30:70.70:748,71,0	1/1:9,0:9:5.60:93,6,0	0/1:17,1:17:99:207,0,125	0/1:19,0:19:97.19:97,0,173	0/1:17,0:17:11.52:218,0,12	0/1:24,0:24:9.24:9,0,98	0/1:18,0:17:9.69:218,0,10	0/1:21,1:21:81.12:81,0,100	0/1:10,0:8:32.37:32,0,72	0/1:15,0:15:50.05:335,0,50	0/1:15,0:15:84.90:85,0,113	1/1:18,0:17:11.43:57,11,0	0/1:22,0:21:9.74:222,0,10	0/1:13,0:13:15.85:167,0,16	0/0:15,0:14:7.94:0,8,120	0/0:17,0:17:51.16:0,51,766	1/1:20,0:19:42.39:414,42,0	1/1:10,0:10:5.22:153,5,0	1/1:9,0:8:11.49:119,11,0
chr10	88728745	.	A	AATGAAT	20367.87	PASS	AB=0.862;AC=39;AF=0.696;AN=56;BaseQRankSum=-5.725;DP=543;FS=26.722;HRun=0;HaplotypeScore=129.4083;InbreedingCoeff=0.0808;MQ=62.16;MQ0=19;MQRankSum=-7.752;QD=44.96;ReadPosRankSum=2.381;VQSLOD=2.5625;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:27:13.56:1466,0,14	0/1:7,0:9:12.89:303,0,13	0/0:29,0:18:34.76:0,35,721	0/0:45,0:16:37.21:0,37,756	1/1:24,0:24:42.14:1088,42,0	0/1:21,0:20:82.69:861,0,83	1/1:17,1:18:47.65:1060,48,0	1/1:17,0:17:42.14:1059,42,0	1/1:13,1:16:30.08:779,30,0	1/1:25,3:31:81.26:2331,81,0	1/1:10,0:10:23.86:414,24,0	0/1:17,0:18:72.38:778,0,72	0/1:22,0:22:95.82:947,0,96	0/1:17,0:17:66.24:860,0,66	0/1:6,17:23:99:118,0,131	1/1:17,1:17:35.79:1001,36,0	1/1:19,0:19:18.03:388,18,0	0/1:9,0:7:4.98:213,0,5	0/1:4,12:20:27.62:1227,0,28	0/1:15,0:15:57.77:631,0,58	1/1:3,16:20:14.77:194,15,0	1/1:23,0:22:30.22:1188,30,0	1/1:13,0:13:27.09:752,27,0	0/1:7,9:17:61.32:61,0,93	0/0:16,0:16:48.16:0,48,1188	1/1:20,0:19:48.16:1365,48,0	1/1:10,0:11:10.09:706,10,0	1/1:10,0:9:27.09:578,27,0
chr10	88729176	.	CA	C	14739.42	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=6.841;DP=516;FS=5.735;HRun=5;HaplotypeScore=75.8017;InbreedingCoeff=0.9401;MQ=68.67;MQ0=0;MQRankSum=-1.160;QD=30.77;ReadPosRankSum=2.154;VQSLOD=5.6331;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:42.12:476,42,0	1/1:2,10:12:30.08:340,30,0	0/0:6,0:6:12.03:0,12,148	0/0:4,0:4:5.98:0,6,57	1/1:5,27:32:78.22:885,78,0	1/1:0,20:20:60.17:681,60,0	1/1:0,12:12:33.09:374,33,0	1/1:1,31:32:93.25:1045,93,0	1/1:1,19:20:57.16:646,57,0	1/1:1,21:22:63.16:705,63,0	1/1:2,12:14:36.10:408,36,0	1/1:2,18:20:45.13:511,45,0	1/1:0,20:20:57.16:647,57,0	1/1:1,19:20:54.15:613,54,0	1/1:4,27:31:81.23:919,81,0	1/1:1,11:12:33.09:374,33,0	1/1:0,21:21:57.16:647,57,0	1/1:0,8:8:21.06:238,21,0	1/1:2,18:20:54.14:603,54,0	1/1:0,26:26:75.21:851,75,0	1/1:0,20:20:60.17:681,60,0	1/1:0,10:10:27.08:306,27,0	1/1:3,21:24:60.07:680,60,0	1/1:0,7:7:21.06:238,21,0	0/0:27,0:27:78.26:0,78,1067	1/1:2,21:23:63.18:714,63,0	1/1:1,29:30:87.25:987,87,0	1/1:1,5:6:15.04:170,15,0
chr10	88730735	.	CA	C	12450.02	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=16.017;DP=627;FS=0.000;HRun=1;HaplotypeScore=161.4114;InbreedingCoeff=0.9983;MQ=85.54;MQ0=0;MQRankSum=-5.697;QD=36.83;ReadPosRankSum=3.706;VQSLOD=4.3819;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.18:0,54,863	0/0:6,0:6:18.06:0,18,288	0/0:25,0:25:75.24:0,75,1161	0/0:24,0:24:62.41:0,62,1024	1/1:0,18:16:42.14:586,42,0	1/1:1,22:23:63.21:880,63,0	1/1:0,21:20:60.20:838,60,0	0/0:32,0:32:93.32:0,93,1481	0/0:19,0:19:57.16:0,57,864	0/0:33,0:33:99:0,99,1581	0/0:28,0:28:72.23:0,72,1127	1/1:0,16:14:33.11:460,33,0	1/1:0,23:22:63.21:878,63,0	1/1:0,24:23:66.22:921,66,0	1/1:0,17:15:45.15:627,45,0	1/1:0,21:19:54.18:748,54,0	0/0:26,0:26:78.22:0,78,1196	1/1:0,9:8:21.07:293,21,0	1/1:0,20:20:60.20:836,60,0	1/1:0,38:38:99:1374,99,0	0/0:17,0:17:48.16:0,48,767	1/1:0,19:18:51.17:711,51,0	1/1:0,18:18:44.98:627,45,0	1/1:0,29:29:78.26:1089,78,0	0/0:28,0:28:84.27:0,84,1320	0/0:18,0:18:54.18:0,54,864	1/1:0,41:39:99:1584,114,0	0/0:14,0:14:39.07:0,39,549
chr10	88730833	.	CT	C	6005.84	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=8.785;DP=645;FS=10.660;HRun=5;HaplotypeScore=82.0826;InbreedingCoeff=0.9974;MQ=91.17;MQ0=0;MQRankSum=-3.521;QD=29.44;ReadPosRankSum=0.211;VQSLOD=4.6433;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:48.14:544,48,0	1/1:0,8:8:21.06:238,21,0	0/0:32,0:32:84.27:0,84,1085	0/0:19,0:19:54.17:0,54,697	0/0:35,0:35:99:0,99,1325	0/0:43,0:43:99:0,120,1641	0/0:22,0:22:57.18:0,57,763	1/1:2,32:34:96.22:1053,96,0	1/1:2,21:23:16.13:572,16,0	1/1:0,31:31:93.27:1055,93,0	1/1:1,19:19:54.15:613,54,0	0/0:15,0:15:42.13:0,42,558	0/0:32,0:32:90.29:0,90,1215	0/0:22,0:22:63.20:0,63,836	0/0:25,0:25:72.23:0,72,969	0/0:29,0:29:87.29:0,87,1190	1/1:2,13:15:39.11:442,39,0	0/0:22,0:22:63.17:0,63,840	0/0:15,0:15:42.13:0,42,556	0/0:25,0:25:66.18:0,66,855	1/1:2,18:20:45.13:510,45,0	0/0:20,0:20:54.18:0,54,739	0/0:29,0:29:87.27:0,87,1160	0/0:19,0:19:54.14:0,54,717	0/0:17,0:17:42.14:0,42,575	1/1:2,20:22:60.16:673,60,0	0/0:20,0:20:60.20:0,60,821	1/1:2,10:12:27.08:306,27,0
chr10	88731317	.	A	AT	11282.11	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=0.452;DP=570;FS=4.375;HRun=5;HaplotypeScore=69.3583;InbreedingCoeff=0.9904;MQ=66.19;MQ0=1;MQRankSum=-3.952;QD=35.59;ReadPosRankSum=-1.077;VQSLOD=4.3827;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:36.09:0,36,387	0/0:15,0:15:45.08:0,45,472	0/0:20,0:17:36.54:0,37,377	0/0:6,0:6:18.05:0,18,193	1/1:6,36:42:99:1449,114,0	1/1:7,20:27:66.21:865,66,0	1/1:1,9:10:30.09:382,30,0	0/0:30,0:30:75.18:0,75,800	0/0:10,0:10:30.05:0,30,312	0/0:31,0:31:81.20:0,81,870	0/0:31,0:31:90.22:0,90,967	1/1:2,13:16:42.13:545,42,0	1/1:0,17:17:51.17:671,51,0	1/1:1,23:24:69.22:908,69,0	1/1:3,14:17:48.16:631,48,0	1/1:2,12:14:42.13:537,42,0	0/0:19,0:19:48.11:0,48,516	1/1:2,2:4:9.01:102,9,0	1/1:2,14:16:42.14:552,42,0	1/1:8,31:39:99:1316,105,0	0/0:13,0:13:39.10:0,39,419	1/1:2,19:21:63.11:777,63,0	1/1:3,34:37:99:1368,105,0	1/1:0,8:8:24.08:316,24,0	0/0:21,0:21:63.13:0,63,667	0/0:29,0:29:75.19:0,75,806	1/1:6,19:25:66.21:865,66,0	0/0:15,0:15:39.10:0,39,419
chr10	88731361	.	CT	C	6624.02	PASS	AB=0.743;AC=34;AF=0.607;AN=56;BaseQRankSum=13.963;DP=577;FS=1.120;HRun=10;HaplotypeScore=96.2184;InbreedingCoeff=0.8251;MQ=76.63;MQ0=0;MQRankSum=-6.597;QD=18.10;ReadPosRankSum=3.322;VQSLOD=5.2239;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:10:16.30:48,16,0	0/0:15,0:15:39.09:0,39,421	0/1:17,1:17:24.40:24,0,213	0/0:17,0:17:12.80:0,13,180	1/1:7,29:36:44.73:611,45,0	1/1:4,20:26:49.99:423,50,0	1/1:0,9:9:23.99:208,24,0	0/0:28,1:29:49.12:0,49,749	1/1:1,0:11:20.37:60,20,0	0/0:26,1:27:34.09:0,34,586	0/0:33,1:34:64.14:0,64,908	1/1:1,13:14:32.98:286,33,0	1/1:2,15:17:41.99:364,42,0	1/1:1,19:20:47.96:417,48,0	1/1:2,17:19:50.98:442,51,0	1/1:1,19:20:47.96:417,48,0	0/0:18,2:20:2.03:0,2,479	0/1:2,12:14:3.19:204,0,3	1/1:2,13:15:8.79:301,9,0	1/1:6,33:40:94.95:809,95,0	0/0:8,0:8:18.05:0,18,199	1/1:3,26:29:41.79:592,42,0	1/1:3,31:34:80.96:703,81,0	1/1:0,7:7:18:156,18,0	0/0:22,2:24:17.07:0,17,638	0/0:23,0:23:51.60:0,52,558	1/1:4,21:27:66.82:558,67,0	0/0:14,0:14:30.07:0,30,323
chr10	88732502	.	A	AG	4736.69	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=7.626;DP=567;FS=3.328;HRun=7;HaplotypeScore=239.6557;InbreedingCoeff=0.9553;MQ=66.50;MQ0=0;MQRankSum=-7.252;QD=14.27;ReadPosRankSum=0.473;VQSLOD=1.9855;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:25:43.09:219,43,0	1/1:1,0:8:20.15:107,20,0	0/0:15,0:15:2.50:0,2,255	0/0:23,0:23:32.56:0,33,362	1/1:10,10:20:23.86:279,24,0	1/1:3,14:18:45:521,45,0	1/1:6,16:22:48.15:579,48,0	1/1:29,0:29:50.89:210,51,0	1/1:9,0:35:71:356,71,0	1/1:11,0:23:32.21:157,32,0	1/1:7,0:17:28.44:142,28,0	1/1:7,16:23:42.09:490,42,0	0/0:32,0:32:75.11:0,75,724	1/1:8,18:26:51.07:582,51,0	0/0:33,0:33:90.12:0,90,862	0/0:19,0:20:39.37:0,39,478	1/1:2,0:10:20.13:102,20,0	1/1:1,4:5:9.03:109,9,0	0/0:22,0:21:45.07:0,45,434	0/0:24,0:24:54.08:0,54,519	1/1:16,0:16:18.75:78,19,0	1/1:5,14:19:39.10:450,39,0	0/0:19,0:19:33.05:0,33,318	0/0:11,0:11:12.01:0,12,116	0/0:19,0:19:48.08:0,48,463	1/1:30,0:30:69.70:289,70,0	0/0:17,0:17:51.07:0,51,486	1/1:6,0:6:16.07:67,16,0
chr10	88732506	.	G	GGA	5491.76	PASS	AB=0.979;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.395;DP=573;FS=0.370;HRun=0;HaplotypeScore=248.1581;InbreedingCoeff=0.4997;MQ=61.87;MQ0=0;MQRankSum=-7.824;QD=26.66;ReadPosRankSum=2.925;VQSLOD=4.9873;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:56.61:335,0,57	0/1:8,0:8:4.72:158,0,5	0/0:14,0:14:39.92:0,40,520	0/0:20,0:20:54.14:0,54,744	0/0:20,0:20:21.71:0,22,113	0/0:19,0:19:7.15:0,7,109	0/0:23,0:23:38.67:0,39,151	1/1:7,27:35:87.08:1341,87,0	0/1:34,0:34:40.35:632,0,40	0/1:19,0:20:66.98:308,0,67	0/1:16,1:17:24.57:286,0,25	0/0:22,0:22:31.23:0,31,125	0/0:31,0:31:81.22:0,81,1176	0/0:29,0:29:53.74:0,54,295	0/0:35,0:35:99:0,105,1463	0/0:22,0:22:27.95:0,28,761	1/1:10,0:10:4.09:189,4,0	0/0:5,0:5:5.89:0,6,17	0/0:22,0:21:45.11:0,45,675	0/0:23,0:23:60.18:0,60,864	1/1:3,14:17:21.06:382,21,0	0/0:18,0:18:7.84:0,8,44	0/0:19,0:19:39.96:0,40,542	0/0:11,0:11:11.99:0,12,154	0/0:17,0:17:51.16:0,51,753	1/1:4,29:33:69.60:1532,70,0	0/0:17,0:17:51.17:0,51,768	1/1:0,7:7:18.06:328,18,0
chr10	88733165	.	CTG	C	1550.40	PASS	AB=0.954;AC=28;AF=0.500;AN=56;BaseQRankSum=3.124;DP=471;FS=19.558;HRun=0;HaplotypeScore=130.4898;InbreedingCoeff=0.3797;MQ=71.50;MQ0=12;MQRankSum=-0.039;QD=6.23;ReadPosRankSum=-2.809;VQSLOD=1.5754;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:25.96:0,26,204	0/1:9,1:10:84.03:84,0,275	0/0:27,0:18:48.45:0,48,718	0/0:39,0:19:24.94:0,25,641	1/1:23,0:21:41.29:319,41,0	1/1:14,0:13:16.88:126,17,0	1/1:11,0:11:6.46:50,6,0	0/0:37,0:37:46.60:0,47,1264	0/0:14,0:14:30.50:0,30,228	0/1:13,1:13:9.05:9,0,442	0/1:14,5:18:55.07:55,0,524	1/1:10,0:10:18.20:122,18,0	0/1:18,0:18:14.84:138,0,15	1/1:16,0:13:26.90:218,27,0	0/1:12,0:10:10.24:16,0,10	0/1:12,0:11:10.93:100,0,11	0/0:13,0:13:30.08:0,30,519	1/1:4,0:4:8.89:64,9,0	0/1:15,0:14:20.45:20,0,70	1/1:15,0:13:7.93:79,8,0	0/0:7,0:7:11.97:0,12,191	0/1:9,0:7:12.32:63,0,12	1/1:18,0:17:8.51:103,9,0	1/1:9,0:7:5.97:49,6,0	0/0:36,0:36:8.88:0,9,1051	0/0:25,0:23:28.57:0,29,835	1/1:20,0:19:11.03:134,11,0	0/0:7,0:7:18.06:0,18,316
chr10	88733175	.	C	CTCTCT	3033.27	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=4.494;DP=471;FS=1.166;HRun=0;HaplotypeScore=155.0566;InbreedingCoeff=0.5705;MQ=57.23;MQ0=19;MQRankSum=-6.519;QD=18.61;ReadPosRankSum=2.956;VQSLOD=3.4303;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:14.39:0,14,158	0/1:9,0:9:84:95,0,84	0/0:26,0:12:21.04:0,21,234	0/0:45,0:16:18.27:0,18,200	0/0:26,0:24:24.97:0,25,340	0/0:17,0:16:17.07:0,17,163	0/0:10,0:10:5.04:0,5,70	0/0:38,0:37:45.49:0,45,776	0/0:14,0:14:21.76:0,22,235	0/1:19,0:16:36.84:37,0,154	0/1:24,0:22:64.35:64,0,121	0/0:11,0:11:14.62:0,15,141	1/1:6,7:15:20.82:491,21,0	0/0:12,0:9:9.71:0,10,149	1/1:5,6:10:14.67:458,15,0	1/1:7,1:8:9.33:133,9,0	0/1:11,0:11:36.60:37,0,57	0/0:5,0:5:11.25:0,11,121	1/1:5,4:9:21.96:496,22,0	1/1:6,6:11:14.98:335,15,0	0/0:6,0:6:3.01:0,3,38	0/0:10,0:7:12.04:0,12,150	1/1:3,10:14:21.07:568,21,0	1/1:7,0:5:0.38:1,0,0	0/0:37,0:37:37.50:0,38,359	0/0:25,0:23:29.28:0,29,306	1/1:11,5:18:26.63:511,27,0	0/0:9,0:8:11.93:0,12,129
chr10	88733176	.	T	TC	215.51	PASS	AB=0.941;AC=7;AF=0.125;AN=56;BaseQRankSum=7.142;DP=468;FS=4.465;HRun=1;HaplotypeScore=142.2726;InbreedingCoeff=0.1520;MQ=58.12;MQ0=19;MQRankSum=-5.834;QD=2.63;ReadPosRankSum=5.386;VQSLOD=-0.0238;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:28.90:0,29,302	0/0:9,0:9:21.37:0,21,201	0/0:26,0:12:24.02:0,24,277	0/0:46,0:16:29.54:0,30,303	0/0:25,0:23:34.79:0,35,426	0/0:17,0:16:21.06:0,21,254	0/0:10,0:10:6.02:0,6,76	0/0:38,0:36:99:0,100,1172	0/0:14,0:14:29.20:0,29,296	0/0:19,0:16:34.40:0,34,377	0/0:24,0:22:34.90:0,35,355	0/0:11,0:11:20.98:0,21,217	0/1:14,0:14:54.12:54,0,64	0/0:12,0:9:14.26:0,14,159	0/1:11,1:10:6.37:18,0,6	0/0:10,0:9:5.21:0,5,78	0/0:11,0:11:13.39:0,13,143	0/0:5,0:5:12.03:0,12,141	0/1:8,2:9:21.07:21,0,85	0/1:13,0:11:40.45:64,0,40	0/0:6,0:6:6.01:0,6,63	0/0:10,0:7:12.04:0,12,152	1/1:14,0:13:17.36:97,17,0	0/0:6,1:5:2.77:0,3,38	0/0:37,0:37:67.46:0,67,740	0/0:24,0:22:59.61:0,60,647	0/1:17,1:18:81.15:95,0,81	0/0:9,0:8:17.27:0,17,191
chr10	88733199	.	CCT	C	2864.38	PASS	AB=0.901;AC=36;AF=0.667;AN=54;BaseQRankSum=-1.310;DP=409;FS=6.143;HRun=0;HaplotypeScore=136.8133;InbreedingCoeff=-0.0923;MQ=51.96;MQ0=18;MQRankSum=-2.504;QD=9.39;ReadPosRankSum=-2.823;VQSLOD=2.6787;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,4:10:0.40:53,0,0	1/1:4,1:7:7.19:126,7,0	0/0:34,0:10:15.17:0,15,327	0/0:57,3:18:26.32:0,26,311	1/1:14,4:16:21.52:261,22,0	1/1:14,0:13:22.95:168,23,0	1/1:8,1:9:5.87:41,6,0	0/1:11,10:19:99:314,0,168	1/1:10,1:11:18.03:186,18,0	0/1:13,1:13:3.11:146,0,3	1/1:18,6:24:29.93:294,30,0	1/1:5,1:6:11.75:99,12,0	0/1:9,2:10:10.09:158,0,10	1/1:6,0:3:3.90:43,4,0	0/1:12,2:11:31.81:32,0,51	0/1:7,0:7:17.67:25,0,18	0/1:7,2:10:25.89:111,0,26	0/1:5,0:5:6.23:33,0,6	0/1:9,0:8:5.17:5,0,133	1/1:8,2:9:5.95:32,6,0	./.	0/0:5,1:3:1.82:0,2,5	0/1:10,1:10:29.85:84,0,30	1/1:4,1:6:2.17:35,2,0	0/1:23,3:29:99:190,0,535	0/1:21,2:20:33.15:319,0,33	0/1:14,2:16:16.61:171,0,17	1/1:9,0:8:8.99:98,9,0
chr10	88733201	.	T	TTC	3615.90	PASS	AB=0.906;AC=49;AF=0.907;AN=54;BaseQRankSum=1.104;DP=428;FS=3.846;HRun=0;HaplotypeScore=146.9398;InbreedingCoeff=0.4002;MQ=50.87;MQ0=16;MQRankSum=-2.120;QD=10.92;ReadPosRankSum=2.228;VQSLOD=3.6886;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:10:2.67:19,3,0	1/1:5,0:9:15.78:115,16,0	0/0:34,0:11:24.44:0,24,253	0/0:59,0:19:14.78:0,15,197	1/1:6,11:15:11.83:167,12,0	1/1:8,5:14:23.86:331,24,0	1/1:5,5:10:4.57:54,5,0	1/1:25,0:23:8.63:147,9,0	1/1:5,0:11:3.25:42,3,0	1/1:4,0:13:26.63:209,27,0	1/1:12,0:26:6.16:81,6,0	1/1:3,2:5:6.02:87,6,0	1/1:5,7:11:18.05:266,18,0	1/1:3,4:4:3.01:35,3,0	1/1:8,7:13:15.04:247,15,0	1/1:2,6:8:12.04:183,12,0	1/1:6,0:10:5.97:46,6,0	1/1:0,5:5:15.05:250,15,0	1/1:5,3:8:9.03:134,9,0	1/1:7,5:11:6.02:98,6,0	./.	1/1:3,3:3:1.25:3,1,0	1/1:4,8:12:15.04:232,15,0	1/1:1,4:6:3.01:36,3,0	0/1:26,0:29:12.97:13,0,451	1/1:14,0:21:40.39:283,40,0	1/1:7,9:17:35.89:521,36,0	1/1:4,0:8:2.94:18,3,0
chr10	88733217	.	AGTGTGTCTGT	A	2096.87	PASS	AB=0.946;AC=26;AF=0.500;AN=52;BaseQRankSum=0.395;DP=368;FS=14.931;HRun=0;HaplotypeScore=151.7901;InbreedingCoeff=0.3359;MQ=51.56;MQ0=14;MQRankSum=-3.539;QD=11.58;ReadPosRankSum=2.048;VQSLOD=1.3399;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:0:0,0,0	1/1:4,1:7:8.50:129,8,0	0/0:43,0:18:42.96:0,43,448	0/0:53,0:23:32.78:0,33,317	1/1:13,0:11:0.76:3,1,0	0/0:14,0:14:10.13:0,10,68	0/1:8,1:9:0.99:85,0,1	0/1:15,0:11:26.64:106,0,27	1/1:6,3:10:12.04:282,12,0	1/1:12,1:11:24.33:347,24,0	1/1:19,6:23:15.05:280,15,0	0/0:3,0:5:1.25:0,1,3	0/0:9,0:8:10.13:0,10,125	0/0:8,0:5:5.32:0,5,21	0/1:12,0:10:9.33:9,0,76	0/1:5,0:7:17.11:31,0,17	1/1:5,1:6:11.81:151,12,0	1/1:8,0:8:13.61:94,14,0	0/1:6,0:5:22.79:39,0,23	0/0:9,0:9:1.10:0,1,37	./.	0/0:4,0:2:2.22:0,2,7	1/1:11,0:11:0.47:1,0,0	./.	0/0:25,0:25:23.61:0,24,420	1/1:13,5:14:29.93:654,30,0	0/1:17,0:17:29.10:29,0,241	1/1:4,0:4:2.96:19,3,0
chr10	88733218	.	GTGTGTC	G	3040.21	PASS	AB=0.981;AC=43;AF=0.827;AN=52;BaseQRankSum=3.225;DP=364;FS=39.297;HRun=0;HaplotypeScore=135.6042;InbreedingCoeff=0.3247;MQ=51.99;MQ0=14;MQRankSum=-3.321;QD=11.88;ReadPosRankSum=0.402;VQSLOD=1.4979;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,2:6:0:0,0,0	1/1:6,0:6:6.44:73,6,0	0/0:41,0:18:42.94:0,43,382	0/0:52,0:23:32.63:0,33,263	1/1:11,2:11:5.86:137,6,0	1/1:12,5:15:24.34:369,24,0	1/1:6,3:9:9.03:178,9,0	0/1:16,0:12:11.89:103,0,12	1/1:10,0:10:9.48:123,9,0	1/1:13,0:11:26.84:256,27,0	1/1:25,0:23:9.06:69,9,0	1/1:4,1:5:3.01:68,3,0	1/1:9,0:8:11.97:51,12,0	1/1:4,4:5:9.03:191,9,0	1/1:12,0:10:7.91:37,8,0	1/1:5,3:8:21:390,21,0	1/1:5,0:5:11.84:104,12,0	1/1:6,2:8:17.81:165,18,0	1/1:6,0:5:11.74:72,12,0	1/1:9,0:9:2.74:12,3,0	./.	1/1:3,0:2:3.01:64,3,0	1/1:9,1:10:0.47:1,0,0	./.	0/1:25,0:25:99:101,0,182	1/1:18,0:14:32.90:425,33,0	0/1:16,1:17:7.88:170,0,8	1/1:4,0:4:2.96:19,3,0
chr10	88733220	.	GTGTC	G	2582.83	PASS	AB=1.000;AC=43;AF=0.827;AN=52;BaseQRankSum=3.608;DP=363;FS=52.881;HRun=0;HaplotypeScore=129.8993;InbreedingCoeff=0.4914;MQ=52.18;MQ0=14;MQRankSum=-3.575;QD=11.23;ReadPosRankSum=0.654;VQSLOD=0.7977;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:0:0,0,0	1/1:6,0:6:5.96:54,6,0	0/0:40,0:18:42.63:0,43,365	0/0:51,0:23:32.58:0,33,227	1/1:13,0:11:6.02:73,6,0	1/1:16,1:15:21.90:255,22,0	1/1:9,0:9:9.02:99,9,0	0/1:16,0:12:2.67:109,0,3	1/1:11,0:11:8.61:80,9,0	1/1:13,0:11:26.82:214,27,0	1/1:24,0:22:4.79:39,5,0	1/1:5,0:5:3.01:35,3,0	1/1:5,4:8:12.77:184,13,0	1/1:8,0:5:9.01:93,9,0	1/1:9,3:10:8.92:126,9,0	1/1:7,1:8:19.87:237,20,0	1/1:5,0:5:11.84:90,12,0	1/1:8,0:8:17.81:133,18,0	1/1:6,0:5:11.74:72,12,0	1/1:6,3:9:2.95:56,3,0	./.	1/1:2,0:2:3.01:44,3,0	1/1:9,1:10:3.46:25,3,0	./.	0/0:25,0:25:4.33:0,4,186	1/1:18,0:14:32.86:311,33,0	1/1:11,5:16:22.97:371,23,0	1/1:4,0:4:2.96:19,3,0
chr10	88733222	.	GTC	G	1744.32	PASS	AB=1.000;AC=43;AF=0.827;AN=52;BaseQRankSum=3.365;DP=358;FS=47.752;HRun=0;HaplotypeScore=125.7162;InbreedingCoeff=0.5467;MQ=52.90;MQ0=15;MQRankSum=-2.913;QD=7.62;ReadPosRankSum=-0.115;VQSLOD=1.1449;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:0:0,0,0	1/1:6,0:6:5.93:39,6,0	0/0:38,0:18:42.53:0,43,362	0/0:50,0:22:32.84:0,33,228	1/1:14,0:13:10.76:72,11,0	1/1:15,2:15:20.77:146,21,0	1/1:9,0:9:8.85:58,9,0	0/1:16,0:12:1.16:112,0,1	1/1:11,0:11:4.87:40,5,0	1/1:14,0:11:26.39:172,26,0	1/1:22,0:22:3.83:24,4,0	1/1:5,0:5:2.98:21,3,0	1/1:8,0:7:12.72:87,13,0	1/1:8,0:5:8.90:61,9,0	1/1:11,1:10:8.87:61,9,0	1/1:8,0:8:17.89:134,18,0	1/1:5,0:5:11.81:76,12,0	1/1:9,0:9:20.75:139,21,0	1/1:6,0:5:11.74:72,12,0	1/1:9,0:9:2.96:24,3,0	./.	1/1:2,0:2:3.01:33,3,0	1/1:11,0:11:6.45:48,6,0	./.	0/0:26,0:25:24.84:0,25,197	1/1:17,0:13:31.45:203,31,0	1/1:15,1:16:34.78:246,35,0	1/1:4,0:4:2.96:19,3,0
chr10	88733324	.	A	ATATTT	14144.44	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-6.598;DP=342;FS=0.000;HRun=0;HaplotypeScore=52.0349;InbreedingCoeff=0.7570;MQ=70.76;MQ0=1;MQRankSum=-4.337;QD=46.99;ReadPosRankSum=2.066;VQSLOD=4.6662;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,12:19:33.07:904,33,0	1/1:1,6:7:14.99:372,15,0	0/0:11,0:12:20.77:0,21,299	0/0:9,0:8:14.79:0,15,170	1/1:2,13:16:32.98:768,33,0	1/1:4,12:17:24.08:706,24,0	1/1:3,2:5:3.01:88,3,0	1/1:12,12:26:41.98:709,42,0	1/1:1,7:10:15.05:442,15,0	1/1:2,11:14:36.07:855,36,0	1/1:1,11:13:36.01:902,36,0	1/1:2,5:7:12.04:353,12,0	1/1:2,7:11:21.07:619,21,0	1/1:2,5:7:9.03:266,9,0	1/1:1,8:8:15.05:442,15,0	1/1:3,6:10:6.02:177,6,0	1/1:1,16:19:33.11:973,33,0	1/1:2,8:10:18.06:531,18,0	1/1:3,8:12:26.96:451,27,0	1/1:0,11:11:27.09:796,27,0	1/1:2,3:6:6.02:176,6,0	1/1:1,0:1:3.01:54,3,0	1/1:3,4:8:11.86:212,12,0	1/1:2,4:7:9.03:265,9,0	0/0:20,0:20:51.16:0,51,950	1/1:3,15:19:45.04:1051,45,0	1/1:1,17:19:45.15:1327,45,0	1/1:2,12:17:24.08:708,24,0
chr10	88733841	.	CT	C	860.09	PASS	AB=1.000;AC=22;AF=0.440;AN=50;BaseQRankSum=3.542;DP=195;FS=0.000;HRun=1;HaplotypeScore=96.5405;InbreedingCoeff=0.5317;MQ=52.74;MQ0=16;MQRankSum=-4.451;QD=12.29;ReadPosRankSum=1.756;VQSLOD=2.2032;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:8.72:0,9,49	1/1:1,0:1:0.89:2,1,0	0/0:11,0:7:18.06:0,18,229	0/0:25,0:11:24.08:0,24,301	1/1:0,9:9:20.92:208,21,0	1/1:1,7:8:15.04:168,15,0	1/1:4,4:8:9.03:101,9,0	0/0:10,0:5:11.44:0,11,70	0/1:3,0:3:2.12:2,0,21	0/1:5,0:5:6.13:6,0,33	1/1:4,0:4:1.03:24,1,0	1/1:0,6:6:15:155,15,0	0/0:6,0:5:12.43:0,12,57	1/1:0,5:5:11.59:121,12,0	0/1:9,0:8:13.44:13,0,38	./.	0/0:2,0:1:2.90:0,3,16	1/1:0,1:1:3.01:33,3,0	0/0:5,0:4:8.76:0,9,63	0/0:10,0:10:16.53:0,17,126	./.	1/1:0,6:6:17.97:174,18,0	0/0:5,0:5:8.72:0,9,48	./.	0/0:19,0:19:33.07:0,33,451	0/0:7,0:6:14.32:0,14,93	0/0:12,0:10:14.37:0,14,109	0/1:5,0:4:25.38:25,0,40
chr10	88733852	.	TCTCTCTCTCTCTCTCTCTCTCTCC	T	4774.70	PASS	AB=0.988;AC=35;AF=0.700;AN=50;BaseQRankSum=6.785;DP=199;FS=10.667;HRun=0;HaplotypeScore=152.5603;InbreedingCoeff=0.1296;MQ=39.28;MQ0=23;MQRankSum=-4.851;QD=33.62;ReadPosRankSum=3.394;VQSLOD=2.6457;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:5:68.69:69,0,129	1/1:1,0:1:3.01:141,3,0	0/0:8,0:4:12:0,12,146	0/0:25,0:8:20.63:0,21,267	1/1:9,0:9:20.85:319,21,0	0/1:9,0:8:4.36:122,0,4	1/1:9,0:9:4.95:68,5,0	0/1:15,0:8:6.43:6,0,424	1/1:3,0:3:9.03:277,9,0	1/1:6,0:6:2.39:41,2,0	0/1:4,0:4:99:118,0,108	1/1:6,0:6:12.03:137,12,0	1/1:4,2:5:15.05:454,15,0	1/1:6,0:5:11.90:248,12,0	1/1:5,4:8:21.07:753,21,0	./.	0/1:4,0:3:3.96:4,0,14	1/1:1,0:1:3.01:36,3,0	0/1:4,0:3:34.89:35,0,179	0/1:7,1:8:99:407,0,155	./.	1/1:6,0:6:15.04:301,15,0	1/1:5,0:5:9.03:117,9,0	./.	0/0:19,0:19:35.83:0,36,2178	0/1:10,0:9:5.28:5,0,302	1/1:8,4:10:30.10:958,30,0	0/1:4,0:3:99:159,0,110
chr10	88733854	.	TCTCTCTCTCTCTCTCTCTCTCC	T	4014.45	PASS	AB=0.956;AC=35;AF=0.700;AN=50;BaseQRankSum=7.338;DP=229;FS=15.545;HRun=0;HaplotypeScore=145.2843;InbreedingCoeff=0.1479;MQ=42.14;MQ0=24;MQRankSum=-5.734;QD=24.48;ReadPosRankSum=2.188;VQSLOD=1.9939;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:6:4.56:5,0,97	1/1:0,1:1:3.01:171,3,0	0/0:10,0:3:8.98:0,9,103	0/0:28,0:10:25.29:0,25,279	1/1:8,1:9:20.96:340,21,0	0/1:8,0:7:1.86:136,0,2	1/1:9,0:9:7.15:78,7,0	0/1:14,0:7:90.30:90,0,357	1/1:10,1:11:6.64:173,7,0	1/1:5,0:5:14.90:162,15,0	0/1:3,1:4:99:149,0,105	1/1:6,0:6:12.04:149,12,0	1/1:6,0:5:11.43:280,11,0	1/1:5,1:5:11.97:260,12,0	1/1:12,0:11:15.99:508,16,0	./.	0/1:4,0:3:12.86:34,0,13	1/1:1,0:1:3.01:39,3,0	0/1:4,0:3:0.93:1,0,156	0/1:8,0:8:99:171,0,146	./.	1/1:5,1:6:15.05:316,15,0	1/1:10,0:10:4.66:12,5,0	./.	0/0:19,0:19:35.86:0,36,1979	0/1:10,0:9:99:119,0,226	1/1:20,0:18:24.01:606,24,0	0/1:3,1:3:84.85:217,0,85
chr10	88733871	.	CT	C	373.96	PASS	AB=0.835;AC=15;AF=0.278;AN=54;BaseQRankSum=5.110;DP=282;FS=3.347;HRun=1;HaplotypeScore=114.7895;InbreedingCoeff=0.3431;MQ=42.27;MQ0=28;MQRankSum=-2.295;QD=4.06;ReadPosRankSum=3.008;VQSLOD=0.7490;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:11.96:0,12,105	0/0:2,0:2:2.22:0,2,7	0/0:27,0:2:6.02:0,6,74	0/0:30,0:10:18.79:0,19,221	0/0:2,0:2:3:0,3,25	0/1:10,2:11:8.98:61,0,9	1/1:10,7:17:14.22:173,14,0	0/0:19,0:13:27.05:0,27,310	1/1:13,0:12:2.04:6,2,0	0/0:5,0:5:8.94:0,9,65	0/0:4,0:4:6:0,6,60	0/1:5,1:6:9.04:31,0,9	0/0:8,0:7:8.78:0,9,62	0/1:7,1:7:12.72:27,0,13	1/1:10,0:9:6.11:19,6,0	0/0:8,0:8:8.67:0,9,47	0/0:4,0:3:2.84:0,3,14	0/1:1,3:4:12.98:91,0,13	0/0:6,0:4:12.01:0,12,123	0/0:6,0:6:2.32:0,2,54	0/0:5,0:3:0:0,0,0	1/1:9,3:12:9.47:106,9,0	./.	0/1:8,0:7:0:0,0,0	0/0:16,0:16:24:0,24,323	0/0:11,0:11:29.17:0,29,185	0/0:19,0:17:7.57:0,8,77	1/1:2,0:2:2.04:6,2,0
chr10	88733885	.	CTGTGTGTG	C	7837.11	PASS	AB=0.833;AC=50;AF=0.893;AN=56;BaseQRankSum=5.543;DP=321;FS=0.967;HRun=0;HaplotypeScore=129.5152;InbreedingCoeff=0.4353;MQ=43.39;MQ0=24;MQRankSum=-1.305;QD=30.14;ReadPosRankSum=1.824;VQSLOD=4.5275;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,1:10:15.94:276,16,0	1/1:0,2:2:6.02:135,6,0	0/1:40,0:5:7.95:8,0,166	0/0:46,0:17:25.30:0,25,473	1/1:0,3:3:6.02:99,6,0	1/1:4,11:14:39.13:887,39,0	1/1:10,6:16:30.10:598,30,0	1/1:10,6:15:15:206,15,0	1/1:1,14:14:12.04:311,12,0	1/1:1,5:6:12.02:235,12,0	1/1:1,4:5:6.02:96,6,0	1/1:3,3:6:12.04:285,12,0	1/1:2,7:7:15.05:296,15,0	1/1:2,9:10:30.10:757,30,0	1/1:0,10:10:12.04:292,12,0	1/1:0,8:8:9.03:236,9,0	1/1:0,2:2:3.01:72,3,0	1/1:3,2:5:15.05:354,15,0	0/1:3,3:4:11:146,0,11	1/1:4,1:5:9.03:182,9,0	1/1:1,3:3:0.47:1,0,0	1/1:3,12:15:42.14:888,42,0	1/1:0,8:8:6.02:109,6,0	1/1:1,9:9:3.90:80,4,0	0/0:9,0:15:24.50:0,25,389	1/1:1,11:12:33.11:768,33,0	1/1:1,17:17:17.17:368,17,0	1/1:1,2:3:6.02:152,6,0
chr10	88733954	.	TCTTC	T	3861.17	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.382;DP=309;FS=18.696;HRun=0;HaplotypeScore=130.6879;InbreedingCoeff=0.6955;MQ=45.82;MQ0=5;MQRankSum=-3.193;QD=14.52;ReadPosRankSum=3.402;VQSLOD=1.7572;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:29.59:193,30,0	1/1:2,0:2:5.92:39,6,0	0/0:21,0:11:11.93:0,12,99	0/0:21,0:10:21.43:0,21,188	1/1:6,0:6:17.56:102,18,0	1/1:23,0:23:62.21:413,62,0	1/1:9,0:7:14.82:102,15,0	1/1:13,12:25:38.77:296,39,0	1/1:9,0:9:20.69:134,21,0	1/1:11,0:11:26.78:194,27,0	1/1:4,0:4:11.75:71,12,0	1/1:8,0:8:20.71:135,21,0	1/1:13,0:13:29.59:193,30,0	1/1:12,0:12:32.56:213,33,0	1/1:13,0:13:32.56:213,33,0	1/1:7,0:7:14.86:103,15,0	1/1:5,0:5:11.80:75,12,0	1/1:4,0:4:11.88:82,12,0	1/1:8,0:8:8.93:63,9,0	1/1:4,0:4:8.84:55,9,0	1/1:2,0:2:5.93:40,6,0	1/1:13,0:13:17.44:104,17,0	1/1:6,0:6:8.83:55,9,0	1/1:15,0:15:22.67:149,23,0	1/1:19,0:19:31.89:402,32,0	1/1:19,0:19:41.56:282,42,0	1/1:12,0:12:20.63:132,21,0	1/1:2,0:1:2.98:21,3,0
chr10	88734420	.	GTGCGCTGT	G	14713.66	PASS	AB=1.000;AC=43;AF=0.827;AN=52;BaseQRankSum=11.836;DP=457;FS=8.642;HRun=0;HaplotypeScore=184.8611;InbreedingCoeff=0.6856;MQ=87.95;MQ0=0;MQRankSum=-13.108;QD=39.45;ReadPosRankSum=7.445;VQSLOD=2.8979;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:15.05:348,15,0	1/1:11,0:11:27.53:575,28,0	0/0:25,0:25:75.20:0,75,2622	0/0:27,0:27:78.18:0,78,2856	1/1:23,0:23:39.52:851,40,0	1/1:12,0:12:24.04:507,24,0	1/1:14,0:14:15.05:348,15,0	0/1:18,0:18:27.30:258,0,27	1/1:17,0:17:36.12:842,36,0	1/1:17,0:17:23.17:743,23,0	1/1:19,1:20:36.12:839,36,0	1/1:13,2:15:32.98:683,33,0	1/1:24,0:24:48.12:1065,48,0	1/1:18,0:18:48.08:1036,48,0	1/1:29,1:30:20.24:962,20,0	1/1:30,0:30:54.16:1200,54,0	./.	0/0:3,0:3:0.47:0,0,1	1/1:5,0:5:2.46:70,2,0	1/1:22,0:22:39.13:914,39,0	./.	1/1:18,0:18:18.09:831,18,0	1/1:21,0:21:36.12:845,36,0	1/1:8,0:8:9.03:174,9,0	0/0:22,0:22:63.21:0,63,2697	1/1:11,0:11:16.49:407,16,0	1/1:15,0:15:36.12:822,36,0	1/1:10,0:10:1.10:392,1,0
chr10	88734421	.	TGCGCTGTG	T	19113.16	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=10.828;DP=447;FS=8.899;HRun=0;HaplotypeScore=166.2363;InbreedingCoeff=0.8783;MQ=89.42;MQ0=0;MQRankSum=-12.527;QD=51.66;ReadPosRankSum=5.237;VQSLOD=3.7993;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:15.05:436,15,0	1/1:0,10:10:27.56:737,28,0	0/0:26,0:26:55.99:0,56,2411	0/0:27,0:27:74.99:0,75,2658	1/1:1,20:21:39.60:1073,40,0	1/1:0,12:12:24.08:651,24,0	1/1:0,14:14:15.05:438,15,0	1/1:2,16:18:38.88:563,39,0	1/1:1,16:17:36.12:1050,36,0	1/1:0,17:17:39.06:1005,39,0	1/1:1,18:19:36.12:1044,36,0	1/1:2,13:15:33.10:847,33,0	1/1:0,24:24:48.16:1350,48,0	1/1:0,18:18:48.16:1299,48,0	1/1:2,25:27:42.14:1206,42,0	1/1:0,30:30:54.19:1531,54,0	1/1:4,0:4:5.88:36,6,0	1/1:3,0:3:5.94:41,6,0	1/1:0,5:5:9.01:139,9,0	1/1:1,20:21:39.13:1138,39,0	./.	1/1:2,16:18:39.13:1072,39,0	1/1:0,20:20:36.12:1048,36,0	1/1:0,8:8:9.03:227,9,0	0/0:21,0:21:63.17:0,63,2625	1/1:1,10:11:29.72:609,30,0	1/1:0,15:15:36.12:1048,36,0	1/1:2,8:10:18.06:526,18,0
chr10	88734636	.	AT	A	16922.50	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=10.042;DP=598;FS=0.000;HRun=4;HaplotypeScore=128.2516;InbreedingCoeff=0.9978;MQ=64.97;MQ0=0;MQRankSum=-9.076;QD=31.75;ReadPosRankSum=3.552;VQSLOD=3.5258;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:63.19:755,63,0	1/1:3,11:14:33.10:395,33,0	0/0:26,0:25:68.80:0,69,882	0/0:13,0:13:39.06:0,39,506	1/1:3,33:36:93.28:1113,93,0	1/1:1,21:22:57.17:683,57,0	1/1:0,12:12:27.08:324,27,0	1/1:3,30:33:90.18:1034,90,0	1/1:2,23:25:57.17:682,57,0	1/1:0,27:27:78.13:914,78,0	1/1:0,30:30:84.26:1006,84,0	1/1:0,19:19:51.16:607,51,0	1/1:0,18:18:51.16:610,51,0	1/1:1,26:27:78.24:928,78,0	1/1:1,18:19:51.16:611,51,0	1/1:1,18:19:48.15:573,48,0	1/1:1,20:21:54.17:647,54,0	1/1:0,12:12:30.09:360,30,0	1/1:0,12:12:36.11:431,36,0	1/1:0,27:27:78.24:934,78,0	1/1:3,15:18:42.13:504,42,0	1/1:0,17:17:51.16:611,51,0	1/1:2,22:24:57.17:683,57,0	1/1:0,7:7:21.06:249,21,0	0/0:26,0:26:78.26:0,78,1091	1/1:0,19:19:54.14:634,54,0	1/1:1,32:33:96.29:1151,96,0	1/1:2,16:18:42.06:485,42,0
chr10	88735233	.	CCT	C	4917.36	PASS	AB=0.974;AC=43;AF=0.768;AN=56;BaseQRankSum=4.425;DP=546;FS=2.739;HRun=0;HaplotypeScore=149.2738;InbreedingCoeff=0.2364;MQ=65.84;MQ0=11;MQRankSum=-4.611;QD=11.15;ReadPosRankSum=5.405;VQSLOD=4.1657;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,1:21:33.02:184,0,33	1/1:5,0:5:5.98:47,6,0	0/0:43,0:27:74.28:0,74,981	0/0:36,0:24:63.15:0,63,810	1/1:2,21:23:5.73:57,6,0	1/1:15,3:18:47.95:408,48,0	1/1:19,2:21:38.96:330,39,0	1/1:31,0:29:49.75:416,50,0	0/1:11,0:11:54.39:56,0,54	1/1:26,0:26:44.89:363,45,0	1/1:18,0:18:11:76,11,0	1/1:14,2:16:41.93:350,42,0	0/1:11,1:12:28.42:165,0,28	1/1:16,4:20:44:366,44,0	1/1:19,1:19:22.56:303,23,0	0/1:19,0:19:2.17:294,0,2	1/1:19,0:19:8.97:70,9,0	1/1:0,20:20:6.02:72,6,0	1/1:11,0:10:23.95:204,24,0	0/1:10,0:10:2.14:103,0,2	1/1:22,0:22:3.41:19,3,0	1/1:5,2:7:9.01:87,9,0	0/1:15,0:15:34.68:120,0,35	0/1:29,2:31:85.78:369,0,86	0/0:26,0:25:45.06:0,45,514	1/1:17,0:17:26.35:208,26,0	1/1:18,0:18:5.12:226,5,0	1/1:10,0:10:2.99:24,3,0
chr10	88735234	.	CTCTGTGTGTGTGTGTGTGTGTGTATG	C	6873.83	PASS	AB=0.969;AC=29;AF=0.518;AN=56;BaseQRankSum=-2.838;DP=539;FS=4.283;HRun=0;HaplotypeScore=337.7122;InbreedingCoeff=-0.1585;MQ=65.11;MQ0=11;MQRankSum=-0.865;QD=17.85;ReadPosRankSum=-4.236;VQSLOD=2.0298;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:43.58:44,0,2382	1/1:0,5:5:6.02:425,6,0	0/0:43,0:27:74.13:0,74,1727	0/0:35,0:23:64.71:0,65,1318	0/0:23,0:23:9.50:0,10,271	0/1:18,0:18:49.66:50,0,1120	0/1:21,0:21:99:118,0,413	1/1:31,0:29:78.35:654,78,0	0/1:11,0:11:44.77:45,0,1614	1/1:0,24:24:54:1515,54,0	1/1:2,16:18:12.04:831,12,0	0/1:16,0:16:99:157,0,412	0/1:12,0:12:42.75:43,0,1751	0/1:20,0:20:83.59:84,0,714	0/1:20,0:19:99:191,0,1247	0/1:18,0:19:99:168,0,1667	0/1:2,16:18:54.93:416,0,55	0/0:20,0:20:5.89:0,6,91	0/1:11,0:10:99:158,0,143	0/1:9,0:9:30.85:31,0,488	1/1:0,22:22:5.95:202,6,0	0/0:8,0:8:9.03:0,9,235	0/1:14,0:14:99:111,0,1400	0/1:32,0:32:41.99:42,0,5650	0/0:25,0:24:48.07:0,48,2594	1/1:1,16:17:35.90:1287,36,0	0/1:18,0:18:89.60:90,0,2216	1/1:0,10:10:3.01:213,3,0
chr10	88735236	.	C	CTG	399.88	PASS	AB=0.975;AC=14;AF=0.259;AN=54;BaseQRankSum=-3.783;DP=562;FS=4.447;HRun=0;HaplotypeScore=174.8667;InbreedingCoeff=-0.0721;MQ=63.45;MQ0=11;MQRankSum=4.723;QD=1.45;ReadPosRankSum=-2.626;VQSLOD=2.1079;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:5.42:54,0,5	0/0:5,0:5:5.68:0,6,28	0/0:42,0:27:26.48:0,26,257	0/0:34,0:22:22.26:0,22,220	0/0:22,0:22:5.60:0,6,27	0/0:17,0:17:8.39:0,8,40	0/1:21,0:21:2.05:18,0,2	1/1:29,0:27:2.86:15,3,0	0/1:12,0:12:7.12:59,0,7	0/0:24,0:24:14.13:0,14,70	0/0:16,0:16:8.52:0,9,42	0/1:15,0:15:10.27:19,0,10	0/0:17,0:17:8.83:0,9,49	0/1:20,0:20:9.22:9,0,40	0/1:22,0:21:7.52:18,0,8	0/1:20,0:20:5.70:102,0,6	0/0:17,0:17:4.88:0,5,20	0/0:20,0:20:5.67:0,6,28	0/1:8,0:8:4.35:20,0,4	0/0:15,0:15:2.78:0,3,14	./.	0/0:9,0:9:8.39:0,8,40	0/1:22,0:22:5.59:6,0,25	0/1:34,0:34:38.66:39,0,98	0/1:14,11:24:77.41:169,0,77	0/0:16,0:16:14.20:0,14,69	0/1:21,0:21:10.45:15,0,10	0/0:10,0:10:2.84:0,3,14
chr10	88735246	.	GTGTGTGTGTGTA	G	4693.20	PASS	AB=0.988;AC=35;AF=0.625;AN=56;BaseQRankSum=3.034;DP=592;FS=0.000;HRun=0;HaplotypeScore=231.2694;InbreedingCoeff=0.3953;MQ=53.77;MQ0=16;MQRankSum=-3.564;QD=11.25;ReadPosRankSum=1.275;VQSLOD=3.6773;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:3.21:3,0,1323	1/1:5,0:5:6.02:168,6,0	0/1:43,0:18:1.16:1,0,102	0/0:45,0:21:11.08:0,11,393	1/1:23,0:23:11.82:326,12,0	1/1:17,1:18:35.44:568,35,0	1/1:22,0:22:18.96:346,19,0	1/1:24,0:22:2.90:17,3,0	0/0:13,0:13:27.09:0,27,1111	1/1:25,0:24:0.10:402,0,0	1/1:16,0:16:12.04:317,12,0	1/1:20,1:21:33.83:520,34,0	0/0:17,0:17:16.19:0,16,1376	0/1:20,2:22:33.18:534,0,33	0/0:23,0:22:18.04:0,18,540	0/1:20,0:20:99:132,0,534	1/1:17,0:17:9.01:190,9,0	0/1:24,0:24:8.97:174,0,9	1/1:5,0:4:8.88:69,9,0	0/1:18,0:18:41.82:42,0,746	1/1:22,0:22:3.01:55,3,0	1/1:11,0:11:9.03:320,9,0	0/0:19,0:19:29.71:0,30,1371	0/0:36,0:36:56.26:0,56,2787	0/0:22,0:21:27.01:0,27,1084	1/1:16,0:16:15.05:419,15,0	0/1:22,0:22:7.28:7,0,1284	1/1:10,0:10:3.01:84,3,0
chr10	88735248	.	GTGTGTGTGTA	G	4441.76	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=1.446;DP=587;FS=0.474;HRun=0;HaplotypeScore=214.2630;InbreedingCoeff=0.4171;MQ=51.96;MQ0=16;MQRankSum=-1.529;QD=10.63;ReadPosRankSum=-1.485;VQSLOD=3.4412;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:69.44:69,0,969	1/1:5,0:5:6.02:140,6,0	0/1:40,0:16:1.16:1,0,102	0/0:44,0:19:11.04:0,11,293	1/1:18,5:23:17.95:290,18,0	1/1:17,2:19:44.94:552,45,0	1/1:21,2:23:22.57:314,23,0	1/1:22,0:20:2.88:17,3,0	0/0:12,0:12:27.04:0,27,847	1/1:25,0:24:0.03:332,0,0	1/1:16,0:16:12.04:261,12,0	1/1:22,1:23:44.60:558,45,0	0/0:17,0:17:16.18:0,16,1114	1/1:23,2:25:2.51:516,3,0	0/0:19,0:18:12.92:0,13,375	0/1:20,0:20:99:182,0,363	1/1:17,0:17:9.01:162,9,0	1/1:21,1:22:5.94:201,6,0	1/1:5,0:4:8.88:69,9,0	0/1:17,0:17:41.83:42,0,563	1/1:22,0:22:3.01:41,3,0	1/1:0,11:11:9.03:246,9,0	0/0:19,0:19:30.21:0,30,1127	0/0:37,0:37:3.23:0,3,2190	0/0:21,0:20:27:0,27,907	1/1:16,0:16:15.05:350,15,0	0/1:22,0:22:29.94:30,0,973	1/1:10,0:10:3.01:70,3,0
chr10	88735464	.	GA	G	11132.63	PASS	AB=0.519;AC=49;AF=0.875;AN=56;BaseQRankSum=9.395;DP=389;FS=2.160;HRun=2;HaplotypeScore=123.6581;InbreedingCoeff=0.8325;MQ=49.15;MQ0=3;MQRankSum=-4.600;QD=33.13;ReadPosRankSum=1.381;VQSLOD=4.5411;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:54.14:661,54,0	1/1:1,8:9:27.08:337,27,0	0/0:26,0:18:51.10:0,51,769	0/0:8,0:7:18.06:0,18,288	1/1:0,29:29:75.23:939,75,0	1/1:0,11:11:33.11:427,33,0	1/1:1,6:7:18.06:232,18,0	1/1:2,31:33:92.98:1158,93,0	0/1:1,13:14:2.65:464,0,3	1/1:0,18:17:51.17:659,51,0	1/1:2,14:16:36.02:408,36,0	1/1:0,3:3:9.03:117,9,0	1/1:1,11:12:33.11:427,33,0	1/1:3,6:10:24.03:280,24,0	1/1:3,15:18:48.11:597,48,0	1/1:0,13:13:39.13:500,39,0	1/1:3,20:23:50.95:598,51,0	1/1:0,12:12:33.11:427,33,0	1/1:1,9:9:27.08:342,27,0	1/1:0,16:16:42.13:532,42,0	1/1:0,10:10:24.06:292,24,0	1/1:0,7:7:21.07:267,21,0	1/1:0,11:11:30.10:384,30,0	1/1:0,12:12:20.96:270,21,0	0/0:19,0:19:57.19:0,57,908	1/1:1,7:8:24.08:310,24,0	1/1:0,11:11:33.11:428,33,0	1/1:0,2:2:6.02:78,6,0
chr10	88735503	.	CT	C	8879.15	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=3.726;DP=344;FS=0.000;HRun=4;HaplotypeScore=88.8434;InbreedingCoeff=0.8760;MQ=57.41;MQ0=3;MQRankSum=-5.289;QD=28.64;ReadPosRankSum=2.093;VQSLOD=4.6565;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:22:60.04:662,60,0	1/1:0,7:7:18.06:215,18,0	0/0:12,0:7:17.82:0,18,198	0/0:7,0:4:8.85:0,9,83	1/1:4,25:29:80.90:833,81,0	1/1:1,9:10:30.08:348,30,0	1/1:0,5:5:15.05:178,15,0	1/1:12,20:31:62.97:661,63,0	1/1:7,6:13:36.06:384,36,0	1/1:7,13:19:57.06:608,57,0	1/1:2,13:15:30.08:349,30,0	1/1:0,5:5:12.04:143,12,0	1/1:5,4:9:20.99:213,21,0	1/1:4,8:12:30.05:342,30,0	1/1:0,17:17:45.14:536,45,0	1/1:1,14:15:45.13:527,45,0	1/1:6,14:20:47.95:520,48,0	1/1:3,4:7:15.03:167,15,0	1/1:3,5:7:21.01:226,21,0	1/1:4,8:12:30.04:333,30,0	1/1:1,4:5:12.04:143,12,0	1/1:0,1:1:3.01:36,3,0	1/1:1,8:9:24.03:269,24,0	1/1:4,5:9:21.04:230,21,0	0/0:15,0:15:45.12:0,45,556	1/1:0,12:12:36.11:430,36,0	1/1:2,8:10:30.03:325,30,0	1/1:1,5:6:18.03:201,18,0
chr10	88735516	.	TA	T	757.98	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.288;DP=338;FS=1.543;HRun=8;HaplotypeScore=95.4350;InbreedingCoeff=0.7262;MQ=65.22;MQ0=1;MQRankSum=-2.010;QD=24.45;ReadPosRankSum=0.792;VQSLOD=3.9443;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,17:22:57.14:600,57,0	0/0:7,0:7:14.92:0,15,135	0/0:13,0:9:5.40:0,5,134	0/0:8,0:6:8.95:0,9,60	0/0:29,0:29:45.20:0,45,453	0/0:13,0:13:35.44:0,35,321	0/0:7,0:7:21.02:0,21,232	0/0:24,0:23:51.05:0,51,576	1/1:2,7:9:27.05:278,27,0	0/0:14,0:13:25.76:0,26,329	0/0:15,0:15:29.49:0,29,268	0/0:6,0:6:11.89:0,12,112	0/0:7,0:7:0.72:0,1,150	0/0:10,0:10:29.79:0,30,310	0/0:18,0:18:42.47:0,42,372	0/0:18,0:18:50.68:0,51,444	0/0:19,0:19:44.94:0,45,475	0/0:6,0:6:15.03:0,15,172	0/0:10,0:10:29.77:0,30,296	0/0:11,0:11:33.02:0,33,366	0/0:7,0:7:17.99:0,18,208	0/0:1,0:1:3.01:0,3,36	0/0:11,0:11:29.81:0,30,296	0/0:7,0:7:17.95:0,18,196	0/0:13,0:13:33.11:0,33,433	0/0:16,0:16:44.98:0,45,459	0/0:11,0:11:33.01:0,33,357	0/0:6,0:6:18:0,18,184
chr10	88735673	.	T	TCCAGAAG	38412.81	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=5.842;DP=497;FS=5.096;HRun=0;HaplotypeScore=142.1929;InbreedingCoeff=0.9260;MQ=66.88;MQ0=0;MQRankSum=-11.802;QD=88.92;ReadPosRankSum=1.428;VQSLOD=5.9937;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,14:25:63.21:2114,63,0	1/1:2,5:7:21.07:818,21,0	0/0:18,0:18:48.10:0,48,1112	0/0:20,0:20:51.15:0,51,1109	1/1:6,15:21:57.19:2101,57,0	1/1:8,13:23:57.19:2062,57,0	1/1:6,11:19:42.14:1626,42,0	1/1:17,13:32:78.20:2635,78,0	1/1:6,9:15:42.14:1493,42,0	1/1:8,9:18:45.15:1678,45,0	1/1:2,10:14:30.10:1108,30,0	1/1:4,12:16:42.14:1585,42,0	1/1:9,21:30:78.27:2941,78,0	1/1:5,9:14:39.13:1472,39,0	1/1:2,17:21:54.19:2022,54,0	1/1:8,12:21:57.20:2151,57,0	1/1:6,4:10:21.07:832,21,0	1/1:1,1:3:3.01:120,3,0	1/1:14,11:26:60.15:1857,60,0	1/1:7,12:20:51.17:1783,51,0	1/1:15,9:24:48.16:1505,48,0	1/1:4,6:10:21.07:753,21,0	1/1:8,11:20:51.17:1930,51,0	1/1:4,6:11:15.04:589,15,0	0/0:27,0:27:72.23:0,72,1758	1/1:1,8:10:27.09:1008,27,0	1/1:8,7:16:45.15:1631,45,0	1/1:0,5:5:15.05:598,15,0
chr10	88736401	.	A	AAGACCC	47617.75	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=10.522;DP=669;FS=11.395;HRun=0;HaplotypeScore=234.2869;InbreedingCoeff=0.9869;MQ=75.71;MQ0=0;MQRankSum=-12.556;QD=79.50;ReadPosRankSum=2.111;VQSLOD=4.4656;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,27:39:99:3387,105,0	1/1:3,9:12:30.10:1017,30,0	0/0:25,0:25:64.10:0,64,1392	0/0:29,0:29:71.84:0,72,1538	1/1:8,18:26:54.17:1775,54,0	1/1:9,16:23:63.22:2228,63,0	1/1:7,20:24:69.24:2415,69,0	1/1:18,19:24:66.19:2076,66,0	1/1:4,10:13:39.09:1264,39,0	1/1:16,25:41:99:3922,114,0	1/1:6,22:28:69.24:2355,69,0	1/1:6,10:14:39.12:1250,39,0	1/1:14,18:30:84.24:2507,84,0	1/1:8,28:34:99:3381,102,0	1/1:7,23:29:78.22:2647,78,0	1/1:6,16:21:54.18:1808,54,0	1/1:8,10:19:48.16:1683,48,0	1/1:2,4:6:12.04:432,12,0	1/1:12,9:18:48.12:1414,48,0	1/1:11,12:23:54.17:1714,54,0	1/1:14,8:20:27.06:831,27,0	1/1:13,21:34:90.29:2988,90,0	1/1:7,13:20:48.16:1696,48,0	1/1:13,10:21:33.11:1078,33,0	0/0:16,0:16:42.12:0,42,958	1/1:6,13:19:54.18:1811,54,0	1/1:3,10:13:33.11:1187,33,0	1/1:1,5:7:21.07:751,21,0
chr10	88736456	.	A	AC	17551.29	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.716;DP=615;FS=25.350;HRun=5;HaplotypeScore=154.7853;InbreedingCoeff=0.9887;MQ=70.15;MQ0=0;MQRankSum=-7.020;QD=31.34;ReadPosRankSum=1.988;VQSLOD=2.5149;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:30:66.10:810,66,0	1/1:1,10:11:30.06:365,30,0	0/0:19,1:19:13.65:0,14,422	0/0:15,0:14:30.01:0,30,302	1/1:4,26:30:68.90:809,69,0	1/1:1,21:20:54.17:702,54,0	1/1:4,23:25:69.18:882,69,0	1/1:7,18:25:69.21:883,69,0	1/1:2,17:18:51.16:665,51,0	1/1:3,32:35:96.31:1258,96,0	1/1:5,18:23:57.09:701,57,0	1/1:3,26:29:72.23:942,72,0	1/1:3,24:27:75.16:945,75,0	1/1:11,26:36:81.26:1045,81,0	1/1:1,27:27:72.23:936,72,0	1/1:0,15:14:42.09:528,42,0	1/1:2,20:22:57.11:707,57,0	1/1:2,7:9:21.07:276,21,0	1/1:3,15:18:45.15:590,45,0	1/1:2,21:23:66.08:825,66,0	1/1:0,21:20:45.15:587,45,0	1/1:3,24:27:63.03:782,63,0	1/1:2,13:15:38.63:486,39,0	1/1:4,15:19:32.94:389,33,0	0/0:20,0:20:48.12:0,48,516	1/1:2,20:22:60.18:772,60,0	1/1:4,7:11:20.96:235,21,0	1/1:1,14:15:36:430,36,0
chr10	88737615	.	GC	G	605.63	PASS	AC=38;AF=0.826;AN=46;BaseQRankSum=3.829;DP=196;FS=9.370;HRun=2;HaplotypeScore=48.5594;InbreedingCoeff=0.4716;MQ=33.28;MQ0=17;MQRankSum=0.745;QD=4.42;ReadPosRankSum=0.424;VQSLOD=-0.2182;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:3:3:27,3,0	1/1:1,2:3:7.87:33,8,0	0/0:12,0:4:12.03:0,12,153	0/0:22,0:4:11.76:0,12,108	./.	1/1:3,2:3:4.90:18,5,0	1/1:6,10:14:30.03:186,30,0	0/0:4,0:2:0:0,0,0	1/1:0,4:2:4.41:14,4,0	1/1:2,3:3:5.39:23,5,0	1/1:2,0:2:1.82:5,2,0	1/1:1,10:4:6.63:21,7,0	1/1:4,1:5:6.29:71,6,0	1/1:5,3:8:12.08:65,12,0	1/1:1,3:2:5.37:35,5,0	1/1:3,5:5:7.25:36,7,0	1/1:4,7:8:4.50:23,5,0	1/1:1,6:6:13.40:59,13,0	./.	./.	1/1:6,20:17:3.44:27,3,0	./.	./.	1/1:1,10:9:5.50:34,6,0	0/0:13,0:12:21.07:0,21,315	1/1:1,2:1:2.80:13,3,0	1/1:1,1:1:3:27,3,0	1/1:1,1:2:5.05:19,5,0
chr10	88737619	.	G	GA	1318.08	PASS	AC=38;AF=0.826;AN=46;BaseQRankSum=1.296;DP=235;FS=6.738;HRun=0;HaplotypeScore=50.7651;InbreedingCoeff=0.5380;MQ=31.85;MQ0=29;MQRankSum=0.086;QD=7.75;ReadPosRankSum=2.287;VQSLOD=2.4440;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:3:3.01:36,3,0	1/1:1,2:3:8.89:65,9,0	0/0:14,0:4:12.04:0,12,153	0/0:21,0:3:8.76:0,9,81	./.	1/1:4,2:3:5.87:36,6,0	1/1:9,10:17:35.42:317,35,0	1/1:4,0:2:6.02:96,6,0	1/1:1,4:2:5.80:32,6,0	1/1:3,3:4:5.94:41,6,0	0/0:1,1:2:1.25:0,1,3	1/1:3,13:7:7.55:46,8,0	1/1:4,1:5:14.93:135,15,0	1/1:6,5:10:14.64:110,15,0	1/1:1,3:2:5.93:53,6,0	1/1:4,6:7:8.79:77,9,0	1/1:1,13:11:10.64:63,11,0	1/1:2,6:7:17.74:125,18,0	./.	./.	1/1:12,20:21:6.58:50,7,0	./.	./.	1/1:2,10:10:5.86:58,6,0	0/0:14,0:13:21.07:0,21,294	1/1:4,2:2:2.98:22,3,0	1/1:2,1:2:3.01:36,3,0	1/1:0,2:2:5.98:55,6,0
chr10	88737930	.	GT	G	12165.18	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.633;DP=627;FS=3.125;HRun=7;HaplotypeScore=118.0091;InbreedingCoeff=0.9566;MQ=76.15;MQ0=0;MQRankSum=-6.389;QD=21.96;ReadPosRankSum=2.482;VQSLOD=3.8120;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:43,0:43:95.52:590,96,0	1/1:1,5:6:14.98:140,15,0	0/0:13,0:14:29.91:0,30,327	0/0:21,0:21:47.22:0,47,558	1/1:5,19:24:54.01:523,54,0	1/1:4,17:21:48.03:472,48,0	1/1:1,16:17:39.03:382,39,0	1/1:4,34:38:99:998,102,0	1/1:23,0:23:55.88:336,56,0	1/1:5,23:28:78.09:773,78,0	1/1:3,22:26:60.11:603,60,0	1/1:2,19:21:48.08:477,48,0	1/1:2,17:19:51.08:507,51,0	1/1:4,17:20:42.03:412,42,0	1/1:3,17:20:48.10:484,48,0	1/1:19,0:19:5.82:36,6,0	1/1:3,25:28:66.13:666,66,0	1/1:5,17:21:48.09:484,48,0	1/1:10,16:26:54.06:529,54,0	1/1:3,17:20:56.09:539,56,0	1/1:3,24:27:67.94:665,68,0	1/1:2,15:17:45.05:443,45,0	1/1:3,15:18:48.02:464,48,0	1/1:1,14:15:36.07:363,36,0	0/0:38,0:38:96.31:0,96,1204	1/1:4,11:15:33.06:333,33,0	1/1:5,23:27:62.99:615,63,0	1/1:2,10:12:33.07:332,33,0
chr10	88737937	.	TA	T	13561.63	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=5.298;DP=618;FS=6.180;HRun=1;HaplotypeScore=114.7312;InbreedingCoeff=0.9580;MQ=78.19;MQ0=0;MQRankSum=-8.085;QD=24.79;ReadPosRankSum=4.445;VQSLOD=4.7635;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,40:42:99:1432,108,0	1/1:8,0:8:14.99:140,15,0	0/0:15,0:15:35.37:0,35,499	0/0:24,0:24:68.81:0,69,819	1/1:21,0:21:54.02:523,54,0	1/1:22,0:22:47.77:472,48,0	1/1:18,0:18:39.03:383,39,0	1/1:38,0:38:99:999,102,0	1/1:2,19:21:63.16:836,63,0	1/1:29,0:29:78.11:775,78,0	1/1:23,0:23:60.12:603,60,0	1/1:22,0:22:48.08:478,48,0	1/1:19,0:19:51.08:507,51,0	1/1:21,0:20:42.03:412,42,0	1/1:20,0:19:48.10:484,48,0	1/1:1,18:19:6.02:83,6,0	1/1:27,0:27:66.13:666,66,0	1/1:21,0:20:48.10:484,48,0	1/1:22,0:22:54.06:529,54,0	1/1:22,0:22:56.09:539,56,0	1/1:27,0:27:67.94:665,68,0	1/1:19,0:19:45.05:443,45,0	1/1:18,0:18:48.03:465,48,0	1/1:14,0:14:36.07:363,36,0	0/0:32,0:32:96.24:0,96,1340	1/1:13,0:13:33.07:333,33,0	1/1:28,0:27:63:615,63,0	1/1:13,0:13:33.07:332,33,0
chr10	88738021	.	TC	T	18950.99	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=5.726;DP=609;FS=0.463;HRun=2;HaplotypeScore=104.9665;InbreedingCoeff=0.9967;MQ=77.12;MQ0=0;MQRankSum=-9.928;QD=35.82;ReadPosRankSum=4.834;VQSLOD=4.7300;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:63.18:802,63,0	1/1:0,7:7:21.07:272,21,0	0/0:19,0:19:57.19:0,57,836	0/0:33,0:33:93.04:0,93,1326	1/1:0,27:27:72.23:934,72,0	1/1:2,21:23:63.19:803,63,0	1/1:1,19:20:51.17:662,51,0	1/1:2,38:40:99:1435,114,0	1/1:0,22:22:63.20:818,63,0	1/1:0,26:26:78.25:1013,78,0	1/1:4,9:13:27.09:350,27,0	1/1:1,24:25:69.21:882,69,0	1/1:0,21:21:63.16:797,63,0	1/1:0,21:21:57.19:740,57,0	1/1:1,22:23:63.20:817,63,0	1/1:1,13:14:39.13:506,39,0	1/1:1,17:18:54.16:686,54,0	1/1:2,19:21:57.18:740,57,0	1/1:0,23:23:69.15:837,69,0	1/1:0,29:29:87.28:1128,87,0	1/1:1,16:17:51.17:662,51,0	1/1:0,25:25:66.21:856,66,0	1/1:1,18:19:51.17:660,51,0	1/1:0,7:7:21.07:273,21,0	0/0:28,0:28:63.19:0,63,907	1/1:1,20:21:60.17:762,60,0	1/1:1,25:26:66.21:856,66,0	1/1:1,19:20:51.17:661,51,0
chr10	88738265	.	CA	C	7421.30	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=10.516;DP=415;FS=12.462;HRun=7;HaplotypeScore=149.0797;InbreedingCoeff=0.8647;MQ=76.36;MQ0=0;MQRankSum=-10.637;QD=21.26;ReadPosRankSum=0.506;VQSLOD=3.2428;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,9:12:21.03:212,21,0	1/1:0,3:3:6.01:61,6,0	0/0:16,0:16:9.43:0,9,394	0/0:15,0:15:15.68:0,16,334	1/1:4,24:27:33.06:335,33,0	1/1:2,8:9:24.05:243,24,0	1/1:1,16:17:39.08:396,39,0	1/1:8,23:31:60.13:609,60,0	1/1:2,11:13:30.06:305,30,0	1/1:0,19:19:51.11:518,51,0	1/1:3,16:19:38.95:380,39,0	1/1:2,11:13:27.06:275,27,0	1/1:4,10:14:27.05:273,27,0	1/1:0,7:7:21.04:213,21,0	1/1:4,12:16:36.06:360,36,0	1/1:0,6:6:15.03:152,15,0	1/1:3,7:10:20.96:197,21,0	1/1:2,1:3:3.01:31,3,0	1/1:1,11:12:33.07:331,33,0	1/1:2,25:25:66.13:671,66,0	1/1:5,6:11:15.03:152,15,0	1/1:1,25:26:48.09:487,48,0	1/1:2,9:11:18.03:183,18,0	./.	0/0:31,0:31:84.25:0,84,1039	1/1:1,15:16:45.10:458,45,0	1/1:3,10:13:27.05:273,27,0	1/1:0,12:12:30.07:305,30,0
chr10	88738407	.	AT	A	7055.47	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=9.423;DP=418;FS=0.000;HRun=8;HaplotypeScore=180.0077;InbreedingCoeff=0.8528;MQ=74.64;MQ0=1;MQRankSum=-9.500;QD=20.16;ReadPosRankSum=3.589;VQSLOD=2.9777;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,12:15:21.02:201,21,0	1/1:1,8:9:24.03:230,24,0	0/0:31,1:28:36.39:0,36,411	0/0:17,0:14:22.14:0,22,272	1/1:6,38:44:93.11:887,93,0	1/1:2,14:16:36.04:341,36,0	1/1:3,10:13:21.02:203,21,0	1/1:0,14:14:36.06:347,36,0	1/1:1,5:6:14.97:134,15,0	1/1:1,24:25:69.11:665,69,0	1/1:5,23:28:57.02:538,57,0	1/1:1,15:16:27.04:260,27,0	1/1:0,8:8:12.02:116,12,0	1/1:1,4:5:9.01:86,9,0	1/1:1,8:9:24.02:225,24,0	1/1:0,5:5:12.02:116,12,0	1/1:2,3:5:9.01:86,9,0	1/1:1,5:6:6.01:58,6,0	1/1:2,5:7:9.01:87,9,0	1/1:2,28:30:75.11:723,75,0	1/1:2,8:10:15.02:144,15,0	1/1:0,12:12:30.05:289,30,0	1/1:3,23:26:60.09:579,60,0	1/1:1,4:5:8.73:86,9,0	0/0:19,0:19:57.17:0,57,688	1/1:3,12:15:27.03:259,27,0	1/1:5,6:11:17.98:164,18,0	1/1:0,10:10:24.04:232,24,0
chr10	88738429	.	CTG	C	5581.46	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=11.140;DP=425;FS=10.428;HRun=0;HaplotypeScore=189.1632;InbreedingCoeff=0.7939;MQ=77.36;MQ0=1;MQRankSum=-12.162;QD=15.95;ReadPosRankSum=3.930;VQSLOD=4.1543;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:29.36:202,29,0	1/1:9,1:10:29.81:215,30,0	0/0:34,0:30:81.25:0,81,1386	0/0:22,0:20:53.48:0,53,986	1/1:33,3:36:86.55:658,87,0	1/1:16,3:19:32.82:252,33,0	1/1:12,1:13:26.87:219,27,0	1/1:14,1:15:22.72:180,23,0	1/1:5,1:6:11.96:102,12,0	1/1:22,3:25:58.78:489,59,0	1/1:26,3:29:64.43:467,64,0	1/1:15,3:18:29.88:249,30,0	1/1:5,1:6:9:98,9,0	1/1:4,0:4:5.97:43,6,0	1/1:5,1:6:14.90:107,15,0	1/1:5,0:5:8.95:67,9,0	1/1:7,0:7:8.95:65,9,0	1/1:3,2:5:5.97:43,6,0	1/1:8,1:9:14.88:128,15,0	1/1:28,3:31:89.94:661,90,0	1/1:13,2:15:17.91:143,18,0	1/1:20,1:21:45.20:324,45,0	1/1:21,2:23:53.30:403,53,0	1/1:5,2:7:2.92:37,3,0	0/0:19,0:19:54.19:0,54,1043	1/1:7,2:9:17.95:172,18,0	1/1:3,0:4:11.90:84,12,0	1/1:10,0:10:23.86:173,24,0
chr10	88738430	.	TGTAACAC	T	18911.20	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=9.096;DP=401;FS=6.708;HRun=0;HaplotypeScore=165.4171;InbreedingCoeff=0.8046;MQ=80.85;MQ0=1;MQRankSum=-12.289;QD=58.01;ReadPosRankSum=3.782;VQSLOD=4.5508;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:33.11:874,33,0	1/1:1,9:10:30.06:774,30,0	0/0:33,0:30:84.22:0,84,2654	0/0:22,0:21:60.21:0,60,2114	1/1:3,31:35:93.27:2372,93,0	1/1:3,16:19:36.08:857,36,0	1/1:1,12:13:27.09:716,27,0	1/1:1,10:11:24.08:613,24,0	1/1:1,5:6:12.04:289,12,0	1/1:3,19:22:63.22:1590,63,0	1/1:3,23:26:66.02:1458,66,0	1/1:3,14:18:30.10:746,30,0	1/1:1,5:6:9.03:160,9,0	1/1:0,2:2:6.02:168,6,0	1/1:1,5:6:15.01:355,15,0	1/1:0,4:4:9.03:243,9,0	1/1:0,7:7:9.03:251,9,0	1/1:2,2:4:6.02:168,6,0	1/1:1,6:8:18.06:397,18,0	1/1:3,28:31:93.19:2331,93,0	1/1:2,12:14:18.02:391,18,0	1/1:1,18:19:51.13:1299,51,0	1/1:2,18:20:54.07:1397,54,0	1/1:2,4:6:3.88:40,4,0	0/0:18,0:18:54.19:0,54,2197	1/1:2,7:9:18.06:421,18,0	1/1:1,3:4:12.04:332,12,0	1/1:0,10:10:24.08:670,24,0
chr10	88738750	.	G	GAA	19508.79	PASS	AB=0.526;AC=49;AF=0.875;AN=56;BaseQRankSum=1.895;DP=660;FS=13.643;HRun=7;HaplotypeScore=121.6268;InbreedingCoeff=0.8403;MQ=78.34;MQ0=2;MQRankSum=-7.453;QD=32.57;ReadPosRankSum=2.545;VQSLOD=3.6426;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:26:57.10:570,57,0	0/1:1,0:10:14.12:142,0,14	0/0:20,0:20:51.10:0,51,573	0/0:18,0:18:39.01:0,39,419	1/1:8,30:39:78.04:1222,78,0	1/1:1,28:29:81.23:1290,81,0	1/1:2,14:16:39.13:640,39,0	1/1:8,0:35:81.02:761,81,0	1/1:1,0:18:42.08:424,42,0	1/1:4,0:26:57.02:562,57,0	1/1:1,1:26:74.91:721,75,0	1/1:1,10:11:24.08:386,24,0	1/1:2,40:43:99:1749,108,0	1/1:0,21:21:60.20:975,60,0	1/1:1,19:20:51.17:837,51,0	1/1:0,17:16:42.14:689,42,0	1/1:5,0:35:72.57:690,73,0	1/1:3,13:16:33.11:542,33,0	1/1:5,14:19:42.14:678,42,0	1/1:5,33:38:96.25:1498,96,0	1/1:0,0:10:21.04:214,21,0	1/1:3,28:32:80.72:1259,81,0	1/1:5,16:21:48.12:748,48,0	1/1:4,24:29:69.24:1132,69,0	0/0:23,0:23:66.16:0,66,755	1/1:3,1:21:45.02:419,45,0	1/1:2,22:24:57.19:925,57,0	1/1:1,0:16:45.07:436,45,0
chr10	88739081	.	ATTGGCTTGTAG	A	15096.92	PASS	AB=0.970;AC=21;AF=0.375;AN=56;BaseQRankSum=17.526;DP=682;FS=1.086;HRun=0;HaplotypeScore=231.4420;InbreedingCoeff=0.9183;MQ=81.68;MQ0=0;MQRankSum=-16.611;QD=61.87;ReadPosRankSum=4.763;VQSLOD=4.3299;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:22:39.13:1121,39,0	1/1:1,5:6:12.04:374,12,0	0/0:21,0:21:57.20:0,57,3127	0/0:22,0:22:63.22:0,63,2480	0/0:27,0:27:81.26:0,81,3735	0/0:25,0:25:69.24:0,69,3335	0/0:22,0:22:66.23:0,66,3376	1/1:14,22:36:66.20:2090,66,0	1/1:5,20:25:54.19:1858,54,0	1/1:4,29:33:84.29:2902,84,0	1/1:3,18:21:45.15:1483,45,0	0/0:35,0:35:99:0,102,5314	0/0:24,0:24:72.23:0,72,3816	0/0:24,0:24:72.25:0,72,3783	0/0:32,0:32:93.32:0,93,4836	0/1:31,1:32:21.54:22,0,4366	1/1:2,12:14:27.09:901,27,0	0/0:17,0:17:48.16:0,48,2365	0/0:25,0:25:75.26:0,75,3624	0/0:32,0:32:90.30:0,90,3398	1/1:1,10:11:17.86:535,18,0	0/0:29,0:29:78.27:0,78,3347	0/0:28,0:28:75.26:0,75,3073	0/0:20,0:20:57.20:0,57,3101	0/0:22,0:22:66.23:0,66,3288	1/1:4,24:28:72.25:2482,72,0	0/0:33,0:32:96.33:0,96,4868	1/1:2,14:16:39.13:1329,39,0
chr10	88739501	.	TG	T	20042.82	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=5.245;DP=678;FS=8.867;HRun=3;HaplotypeScore=93.1316;InbreedingCoeff=0.9983;MQ=77.71;MQ0=0;MQRankSum=-6.850;QD=32.64;ReadPosRankSum=2.342;VQSLOD=4.7577;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,46:46:99:1599,129,0	1/1:1,10:11:27.08:334,27,0	0/0:20,0:20:52.01:0,52,682	0/0:12,0:12:35.88:0,36,435	1/1:2,22:24:63.20:776,63,0	1/1:1,25:26:69.22:855,69,0	1/1:1,24:25:63.20:781,63,0	1/1:0,27:27:81.20:951,81,0	1/1:0,22:22:60.19:744,60,0	1/1:1,24:25:66:776,66,0	1/1:1,23:24:63.19:768,63,0	1/1:1,12:13:30.09:371,30,0	1/1:2,29:31:78.22:964,78,0	1/1:1,34:35:99:1227,99,0	1/1:0,24:24:54.15:669,54,0	1/1:1,24:25:69.22:853,69,0	1/1:0,31:31:87.27:1078,87,0	1/1:1,8:9:24.08:297,24,0	1/1:0,22:22:66.21:818,66,0	1/1:0,33:33:87.27:1077,87,0	1/1:2,29:31:69.22:855,69,0	1/1:1,26:27:75.24:928,75,0	1/1:0,21:21:48.15:594,48,0	1/1:3,25:28:66.21:818,66,0	0/0:32,0:32:90.30:0,90,1296	1/1:1,19:20:57.15:680,57,0	1/1:1,24:25:72.23:892,72,0	1/1:0,9:9:27.08:335,27,0
chr10	88739677	.	ATATGTGTGTGTGTGTGTGTGTGTG	A	8282.20	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=11.167;DP=491;FS=17.153;HRun=0;HaplotypeScore=248.7424;InbreedingCoeff=0.3913;MQ=50.90;MQ0=16;MQRankSum=-6.755;QD=30.12;ReadPosRankSum=3.538;VQSLOD=1.9545;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:16:26.94:0,27,216	0/1:10,0:10:99:213,0,168	0/0:9,0:3:2.17:0,2,59	0/0:13,0:2:3.01:0,3,35	0/0:29,0:29:63.05:0,63,1952	0/0:18,0:17:20.99:0,21,373	0/0:12,0:12:27.01:0,27,715	0/0:24,0:21:63:0,63,716	0/1:12,0:12:99:151,0,126	0/1:25,0:25:99:384,0,450	0/1:28,0:28:99:562,0,220	0/0:12,0:12:21.06:0,21,1085	1/1:2,20:22:8.66:589,9,0	0/0:15,0:15:35.87:0,36,643	1/1:1,17:18:12.04:791,12,0	1/1:0,14:14:12.04:792,12,0	0/1:16,0:16:74.91:224,0,75	0/0:6,0:5:14.93:0,15,447	1/1:0,8:8:23.96:538,24,0	1/1:1,28:28:24.08:1400,24,0	0/0:13,0:11:26.39:0,26,209	0/0:27,0:27:47.48:0,47,1472	1/1:4,24:26:22.30:1212,22,0	1/1:0,10:11:6.02:376,6,0	0/0:20,0:19:51.06:0,51,1234	0/1:20,0:19:75.78:76,0,406	1/1:0,23:24:11.84:772,12,0	0/1:10,0:10:99:202,0,273
chr10	88739679	.	ATGTGTGTGTGTGTGTGTGTGTG	A	7987.81	PASS	AB=0.789;AC=30;AF=0.600;AN=50;BaseQRankSum=6.705;DP=486;FS=33.067;HRun=0;HaplotypeScore=230.2293;InbreedingCoeff=0.6295;MQ=50.28;MQ0=19;MQRankSum=-4.837;QD=27.36;ReadPosRankSum=-0.742;VQSLOD=2.6228;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:16:2.37:8,2,0	1/1:8,2:10:6.02:342,6,0	./.	./.	0/0:26,0:30:33.10:0,33,1304	0/0:16,0:17:3.01:0,3,185	0/0:12,0:12:9.03:0,9,449	0/0:21,0:18:10.84:0,11,120	1/1:10,0:12:3.01:154,3,0	1/1:18,7:25:21.05:709,21,0	1/1:18,8:28:21.07:858,21,0	0/0:8,0:11:18.06:0,18,844	1/1:22,0:22:8.93:473,9,0	0/0:14,0:14:9.03:0,9,323	1/1:17,0:17:12.04:636,12,0	1/1:14,0:14:12.04:635,12,0	1/1:10,6:16:6.02:346,6,0	0/0:8,0:6:7.58:0,8,324	1/1:8,0:8:6.02:318,6,0	1/1:29,0:28:24.08:1088,24,0	./.	0/0:17,0:25:20.55:0,21,1013	1/1:28,0:26:22.63:1000,23,0	1/1:11,0:11:6.02:312,6,0	0/0:16,0:17:24.05:0,24,641	0/1:16,0:18:26.95:151,0,27	1/1:25,0:23:11.84:630,12,0	0/1:6,0:10:10.79:328,0,11
chr10	88739853	.	ACT	A	4674.22	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=12.663;DP=255;FS=4.667;HRun=0;HaplotypeScore=214.0940;InbreedingCoeff=0.7531;MQ=114.62;MQ0=0;MQRankSum=-12.244;QD=26.86;ReadPosRankSum=7.607;VQSLOD=4.7658;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:2,3:5:11.97:98,12,0	1/1:1,5:6:18.01:177,18,0	0/0:27,0:27:75.26:0,75,1481	0/0:23,0:23:69.18:0,69,1233	1/1:1,5:6:18:157,18,0	1/1:0,7:7:21.03:204,21,0	1/1:1,1:2:6:53,6,0	./.	1/1:0,9:9:27:235,27,0	1/1:1,6:7:21.05:221,21,0	1/1:0,10:10:29.92:241,30,0	1/1:0,7:7:21.03:200,21,0	1/1:0,4:4:11.98:98,12,0	1/1:0,5:5:15.02:144,15,0	1/1:0,6:6:17.99:153,18,0	1/1:0,8:8:23.97:203,24,0	1/1:0,3:3:9:80,9,0	1/1:0,2:2:6.02:67,6,0	1/1:0,2:2:6.01:64,6,0	1/1:0,19:19:56.96:487,57,0	1/1:1,1:2:3:26,3,0	1/1:0,18:18:54.05:500,54,0	1/1:0,7:7:20.95:172,21,0	1/1:0,1:1:2.99:24,3,0	0/0:31,0:31:93.32:0,93,1875	1/1:0,9:9:27.04:262,27,0	1/1:1,14:15:45.01:406,45,0	1/1:4,10:14:42.03:403,42,0
chr10	88739858	.	A	ACTAC	9609.04	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=12.341;DP=243;FS=4.843;HRun=0;HaplotypeScore=198.4660;InbreedingCoeff=0.7269;MQ=116.77;MQ0=0;MQRankSum=-12.010;QD=58.59;ReadPosRankSum=8.943;VQSLOD=4.8907;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:9.03:169,9,0	1/1:0,5:5:15.05:288,15,0	0/0:28,0:28:74.90:0,75,1442	0/0:22,0:22:60.21:0,60,1207	1/1:0,5:5:15.05:289,15,0	1/1:0,7:7:21.07:432,21,0	1/1:0,1:1:3.01:63,3,0	./.	1/1:0,9:9:27.09:513,27,0	1/1:1,6:7:21.07:449,21,0	1/1:0,10:10:30.10:544,30,0	1/1:0,7:7:21.07:437,21,0	1/1:0,4:4:12.04:222,12,0	1/1:0,5:5:15.05:307,15,0	1/1:0,6:6:18.06:342,18,0	1/1:0,8:8:24.08:454,24,0	1/1:0,3:3:9.03:171,9,0	1/1:0,2:2:6.02:135,6,0	1/1:0,2:2:6.02:128,6,0	1/1:0,19:19:57.20:1070,57,0	1/1:0,1:1:3.01:58,3,0	1/1:0,18:18:54.19:1074,54,0	1/1:0,7:7:21.07:384,21,0	1/1:0,1:1:3.01:54,3,0	0/0:29,0:29:87.30:0,87,1810	1/1:0,9:9:27.09:549,27,0	1/1:0,14:15:45.15:866,45,0	1/1:0,10:10:30.10:612,30,0
chr10	88739861	.	G	GATCAAA	14627.78	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=12.110;DP=238;FS=8.066;HRun=0;HaplotypeScore=187.0903;InbreedingCoeff=0.7269;MQ=112.04;MQ0=0;MQRankSum=-11.642;QD=88.12;ReadPosRankSum=9.057;VQSLOD=4.7172;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:9.03:273,9,0	1/1:0,5:5:15.05:466,15,0	0/0:25,0:25:63.92:0,64,1569	0/0:20,0:20:60.19:0,60,1356	1/1:5,0:5:15.05:403,15,0	1/1:7,0:7:21.07:565,21,0	1/1:1,0:1:3.01:81,3,0	./.	1/1:0,9:9:27.09:828,27,0	1/1:1,6:7:21.07:648,21,0	1/1:0,10:10:30.10:909,30,0	1/1:7,0:7:21.07:559,21,0	1/1:0,4:4:12.04:365,12,0	1/1:5,0:5:15.05:410,15,0	1/1:0,6:6:18.06:552,18,0	1/1:0,8:8:24.08:730,24,0	1/1:0,3:3:9.03:278,9,0	1/1:2,0:2:6.02:168,6,0	1/1:0,2:2:6.02:193,6,0	1/1:0,19:19:57.20:1751,57,0	1/1:0,1:1:3.01:89,3,0	1/1:18,0:18:54.19:1456,54,0	1/1:0,7:7:21.07:654,21,0	1/1:0,1:1:3.01:91,3,0	0/0:27,0:27:81.27:0,81,1978	1/1:0,9:9:27.09:834,27,0	1/1:2,14:16:45.15:1395,45,0	1/1:1,10:11:30.10:928,30,0
chr10	88739864	.	C	CAAACAT	23984.33	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=12.230;DP=409;FS=17.431;HRun=0;HaplotypeScore=301.6153;InbreedingCoeff=0.9329;MQ=86.59;MQ0=0;MQRankSum=-11.990;QD=70.13;ReadPosRankSum=4.275;VQSLOD=4.0120;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:21.07:516,21,0	1/1:8,0:8:18.06:447,18,0	0/0:24,0:24:54.66:0,55,1398	0/0:19,0:19:57.15:0,57,1261	1/1:9,5:14:36.12:1151,36,0	1/1:7,7:14:39.13:1274,39,0	1/1:10,1:11:27.09:873,27,0	1/1:17,0:17:42.60:907,43,0	1/1:13,0:13:39.13:926,39,0	1/1:13,0:13:36.12:866,36,0	1/1:22,0:22:55.74:1302,56,0	1/1:7,7:14:42.14:1400,42,0	1/1:12,0:12:36.12:869,36,0	1/1:7,5:12:30.10:971,30,0	1/1:13,0:13:36.12:881,36,0	1/1:15,0:15:42.14:1014,42,0	1/1:10,0:10:24.04:541,24,0	1/1:1,2:3:9.03:310,9,0	1/1:8,0:8:18.53:441,19,0	1/1:25,0:25:75.24:1795,75,0	1/1:8,0:8:9.03:196,9,0	1/1:7,17:25:69.24:2233,69,0	1/1:17,0:17:42.14:967,42,0	1/1:4,0:4:9.03:230,9,0	0/0:24,0:24:72.25:0,72,1766	1/1:17,0:17:48.12:1125,48,0	1/1:27,0:27:78.27:1937,78,0	1/1:12,0:12:33.58:813,34,0
chr10	88741236	.	G	GT	4757.70	PASS	AB=0.625;AC=15;AF=0.268;AN=56;BaseQRankSum=-2.062;DP=561;FS=3.417;HRun=0;HaplotypeScore=91.1467;InbreedingCoeff=0.9057;MQ=51.28;MQ0=54;MQRankSum=1.411;QD=34.98;ReadPosRankSum=0.862;VQSLOD=4.4550;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:35.52:0,36,269	0/0:9,0:8:20.03:0,20,109	0/0:17,0:3:5.62:0,6,83	0/0:32,0:4:7.26:0,7,75	0/0:36,0:36:93.30:0,93,1281	0/0:19,0:19:42.11:0,42,548	0/0:20,0:19:51.14:0,51,692	0/0:21,0:21:60.20:0,60,838	0/0:16,0:15:36.69:0,37,190	0/0:27,0:23:60.02:0,60,276	0/0:29,0:29:53.68:0,54,357	0/0:17,0:17:45.15:0,45,629	1/1:0,8:8:18.06:255,18,0	0/0:13,0:13:36.12:0,36,502	1/1:0,18:18:54.18:759,54,0	1/1:0,13:13:36.12:504,36,0	0/0:24,0:24:64.96:0,65,336	0/0:11,0:11:33.07:0,33,439	1/1:10,8:12:29.61:413,30,0	1/1:1,23:23:69.23:974,69,0	0/0:21,0:21:60.19:0,60,823	0/0:22,0:21:60.18:0,60,821	1/1:0,19:19:48.16:678,48,0	0/1:2,3:4:1.38:114,0,1	0/0:14,0:14:9.93:0,10,136	0/0:23,0:23:69.21:0,69,934	1/1:0,31:31:75.25:1060,75,0	0/0:27,0:21:60.13:0,60,751
chr10	88744226	.	TCA	T	177.89	PASS	AB=0.947;AC=5;AF=0.089;AN=56;BaseQRankSum=8.389;DP=498;FS=42.928;HRun=0;HaplotypeScore=77.5595;InbreedingCoeff=0.3134;MQ=75.93;MQ0=0;MQRankSum=-1.349;QD=2.37;ReadPosRankSum=3.790;VQSLOD=-0.1423;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:44.84:0,45,598	0/0:9,1:10:3.41:0,3,181	0/0:15,0:15:33.87:0,34,494	0/0:21,0:21:45.48:0,45,503	0/0:17,0:17:37.74:0,38,546	0/0:19,0:19:53.70:0,54,616	0/0:28,0:28:75.26:0,75,966	0/1:13,0:13:9.15:9,0,122	0/0:18,0:18:34.97:0,35,593	0/0:18,0:18:51.57:0,52,354	0/0:6,0:6:18.01:0,18,194	0/0:18,0:18:41.69:0,42,475	0/0:14,0:14:36.10:0,36,506	0/0:20,0:20:47.91:0,48,629	0/0:17,0:17:41.85:0,42,517	0/0:19,0:19:53.71:0,54,676	0/0:28,0:28:46.30:0,46,433	0/0:26,0:26:61.84:0,62,811	0/0:14,0:14:37.89:0,38,349	0/0:15,0:15:34.03:0,34,424	0/1:32,0:32:99:100,0,124	0/0:16,0:16:45.01:0,45,559	0/0:15,0:15:35.84:0,36,456	0/0:18,0:18:53.83:0,54,729	0/0:14,0:14:34.36:0,34,227	0/1:17,4:21:78.76:124,0,79	0/0:15,0:15:33.08:0,33,465	1/1:9,0:9:17.32:64,17,0
chr10	88744228	.	AC	A	1473.67	PASS	AB=0.887;AC=28;AF=0.500;AN=56;BaseQRankSum=6.084;DP=502;FS=22.843;HRun=11;HaplotypeScore=67.0249;InbreedingCoeff=0.1737;MQ=77.31;MQ0=0;MQRankSum=-0.922;QD=4.12;ReadPosRankSum=4.110;VQSLOD=0.1389;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:23.88:0,24,226	1/1:8,4:12:14.45:105,14,0	0/0:14,0:14:11.47:0,11,209	0/0:23,0:23:11.82:0,12,155	0/0:18,0:18:5.83:0,6,176	0/1:16,3:19:40.98:41,0,187	0/1:24,5:29:86.79:87,0,368	1/1:5,0:12:12.20:36,12,0	0/0:17,0:18:14.64:0,15,159	1/1:9,8:17:29.93:243,30,0	0/1:7,0:7:0:0,0,0	0/1:15,3:18:24.29:24,0,133	0/0:14,0:14:24.03:0,24,235	0/0:19,1:20:2.51:0,3,194	0/1:16,1:17:6.84:7,0,128	0/1:14,5:19:53.38:53,0,267	1/1:10,15:27:31.96:442,32,0	0/1:24,2:26:59.56:60,0,347	0/1:11,4:15:33.64:121,0,34	0/1:13,1:15:32.06:32,0,108	1/1:9,0:31:42.76:123,43,0	0/1:17,0:17:15.60:16,0,168	0/1:12,2:14:0.62:1,0,171	0/1:16,3:19:25.84:26,0,333	1/1:11,3:14:14.95:122,15,0	1/1:9,0:21:27.36:78,27,0	0/0:15,0:15:22.25:0,22,198	1/1:0,0:9:14.26:41,14,0
chr10	88746000	.	CGTGTGTGTGTGTGTGTGTGTGT	C	3484.85	PASS	AB=0.863;AC=20;AF=0.357;AN=56;BaseQRankSum=7.476;DP=492;FS=39.548;HRun=0;HaplotypeScore=263.8656;InbreedingCoeff=0.3388;MQ=61.77;MQ0=17;MQRankSum=-5.537;QD=16.44;ReadPosRankSum=0.153;VQSLOD=0.9803;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:30:6.02:275,6,0	0/0:7,0:6:9.03:0,9,529	0/0:20,0:17:3.01:0,3,46	0/0:30,0:23:3.01:0,3,98	1/1:9,6:15:12.04:548,12,0	1/1:12,0:12:5.80:88,6,0	0/1:20,0:19:17.96:60,0,18	0/0:25,0:24:24.07:0,24,850	1/1:8,0:18:21.07:1062,21,0	0/0:22,0:22:34.92:0,35,1665	0/0:9,0:9:15.04:0,15,639	1/1:10,2:12:6.02:347,6,0	0/1:14,0:16:54.71:55,0,116	1/1:11,6:17:6.02:347,6,0	0/1:15,0:19:55.06:58,0,55	0/1:10,0:13:91.85:92,0,101	0/0:15,0:17:21.07:0,21,1165	0/0:24,0:24:11.99:0,12,197	0/0:18,0:18:12.04:0,12,258	0/0:7,0:6:9.02:0,9,142	0/0:33,0:34:30.27:0,30,883	1/1:3,4:6:6.02:347,6,0	0/1:10,0:12:92.37:92,0,467	0/1:14,0:19:99:116,0,273	0/0:17,0:17:24.08:0,24,1513	0/0:13,0:13:12.03:0,12,517	0/0:25,0:26:2.04:0,2,629	0/0:6,0:8:15.05:0,15,681
chr10	88746755	.	T	TA	5184.17	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-14.551;DP=622;FS=6.819;HRun=8;HaplotypeScore=68.4570;InbreedingCoeff=0.9398;MQ=69.41;MQ0=0;MQRankSum=0.532;QD=29.46;ReadPosRankSum=2.882;VQSLOD=4.9810;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:38:62.18:0,62,181	0/0:9,0:9:27.01:0,27,247	0/0:8,0:8:12:0,12,110	0/0:7,0:7:8.99:0,9,82	0/0:40,0:40:99:0,105,960	0/0:21,0:21:54.01:0,54,490	0/0:21,0:21:51.02:0,51,467	0/0:38,0:38:99:0,105,950	0/0:0,1:20:0.49:0,0,59	0/0:18,0:18:48.02:0,48,437	0/0:22,0:22:57.03:0,57,522	0/0:26,0:26:69.01:0,69,622	1/1:3,17:20:44.83:519,45,0	0/0:20,0:20:50.18:0,50,465	1/1:2,30:33:87.09:984,87,0	1/1:3,20:23:60.14:678,60,0	0/0:36,0:36:96.02:0,96,873	0/0:21,0:21:60.03:0,60,549	1/1:2,13:15:39.12:449,39,0	1/1:4,29:33:87.26:1004,87,0	0/0:14,0:14:33:0,33,298	0/0:25,0:25:72.04:0,72,659	1/1:2,17:19:48.12:546,48,0	1/1:1,17:18:48.14:554,48,0	0/0:31,0:31:90.05:0,90,823	0/0:27,0:27:72.03:0,72,655	1/1:1,14:15:39.12:450,39,0	0/0:4,0:4:12.01:0,12,110
chr10	88746915	.	TTATGCTGTGGCTGAGAGTGCTCAGTCC	T	5504.92	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.428;DP=798;FS=21.457;HRun=0;HaplotypeScore=528.3072;InbreedingCoeff=0.9993;MQ=88.69;MQ0=0;MQRankSum=-9.116;QD=131.07;ReadPosRankSum=2.078;VQSLOD=4.1183;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,16:22:34.85:1976,35,0	0/0:10,0:10:27.09:0,27,2840	0/0:34,0:34:96.32:0,96,6547	0/0:33,0:33:99:0,99,6804	0/0:27,0:27:78.27:0,78,8631	0/0:21,0:21:63.20:0,63,5059	0/0:31,0:31:90.29:0,90,9426	0/0:34,0:34:96.31:0,96,7332	1/1:3,17:20:48.16:3529,48,0	0/0:35,0:35:99:0,102,11425	0/0:12,0:12:36.11:0,36,3424	0/0:32,0:32:93.31:0,93,10810	0/0:27,0:27:76.44:0,76,9003	0/0:39,0:39:99:0,117,13069	0/0:37,0:37:99:0,111,12356	0/0:23,0:22:69.22:0,69,7874	0/0:27,0:27:81.28:0,81,9481	0/0:16,0:16:48.16:0,48,5157	0/0:25,0:25:75.25:0,75,6501	0/0:34,0:34:99:0,102,11072	0/0:81,0:81:99:0,241,26769	0/0:30,0:30:87.28:0,87,8426	0/0:28,0:28:84.29:0,84,8515	0/0:28,0:28:81.26:0,81,8515	0/0:20,0:20:60.21:0,60,6432	0/0:33,0:33:96.33:0,96,10221	0/0:25,0:25:72.25:0,72,7022	0/0:14,0:14:42.14:0,42,4724
chr10	88747469	.	AT	A	1491.61	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.426;DP=554;FS=0.619;HRun=2;HaplotypeScore=59.1665;InbreedingCoeff=0.9946;MQ=92.42;MQ0=0;MQRankSum=-4.578;QD=33.15;ReadPosRankSum=1.608;VQSLOD=3.5637;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:90.22:1146,90,0	0/0:6,0:6:18.06:0,18,269	0/0:29,0:29:87.28:0,87,1253	0/0:22,0:22:66.22:0,66,935	0/0:29,0:29:87.28:0,87,1281	0/0:22,0:22:66.21:0,66,969	0/0:26,0:26:78.22:0,78,1107	0/0:23,0:23:63.20:0,63,909	1/1:0,13:13:36.12:467,36,0	0/0:30,0:30:90.30:0,90,1348	0/0:26,0:26:78.25:0,78,1147	0/0:16,0:16:48.15:0,48,700	0/0:19,0:19:57.18:0,57,834	0/0:14,0:14:42.14:0,42,629	0/0:15,0:15:45.13:0,45,634	0/0:18,0:18:51.17:0,51,763	0/0:24,0:24:72.24:0,72,1079	0/0:11,0:11:33.11:0,33,494	0/0:15,0:15:45.14:0,45,656	0/0:22,0:22:66.20:0,66,950	0/0:23,0:23:69.23:0,69,1034	0/0:10,0:10:30.10:0,30,450	0/0:9,0:9:27.08:0,27,384	0/0:14,0:14:42.10:0,42,567	0/0:11,0:11:30.08:0,30,410	0/0:27,0:27:81.26:0,81,1193	0/0:24,0:24:72.16:0,72,1029	0/0:24,0:24:69.23:0,69,1033
chr10	88747759	.	CA	C	3493.91	PASS	AB=0.676;AC=27;AF=0.482;AN=56;BaseQRankSum=5.311;DP=601;FS=3.109;HRun=13;HaplotypeScore=73.9575;InbreedingCoeff=0.6167;MQ=65.39;MQ0=8;MQRankSum=1.640;QD=10.85;ReadPosRankSum=2.763;VQSLOD=3.5918;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:15:41.84:0,42,382	0/0:10,0:10:27.04:0,27,258	0/0:38,0:10:3.91:0,4,39	0/1:36,0:9:9.40:17,0,9	1/1:3,22:25:42.42:474,42,0	0/1:8,23:30:11.91:353,0,12	1/1:4,14:18:9.59:233,10,0	0/0:24,0:24:30.82:0,31,432	0/0:13,0:15:44.74:0,45,408	0/0:34,0:37:27.57:0,28,581	0/0:26,0:27:58.01:0,58,528	1/1:6,9:15:20.41:165,20,0	1/1:3,13:16:29.82:218,30,0	1/1:4,11:16:21.88:195,22,0	1/1:4,10:14:14.61:107,15,0	1/1:2,7:9:17.83:131,18,0	0/0:28,0:30:77.74:0,78,708	1/1:8,16:24:20.18:348,20,0	0/1:9,14:22:14.02:238,0,14	0/1:10,17:29:77.57:274,0,78	0/0:11,0:11:26.83:0,27,236	1/1:1,10:12:22.90:159,23,0	1/1:1,13:15:37.67:259,38,0	1/1:2,4:6:11.92:87,12,0	0/0:15,1:16:13.37:0,13,259	0/0:24,1:25:37.73:0,38,488	0/1:8,22:33:53.11:235,0,53	0/0:29,1:30:59:0,59,699
chr10	88748803	.	C	CTGAG	30312.90	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-17.582;DP=783;FS=4.368;HRun=0;HaplotypeScore=102.2770;InbreedingCoeff=0.9997;MQ=84.93;MQ0=0;MQRankSum=-5.401;QD=57.85;ReadPosRankSum=6.974;VQSLOD=5.9003;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,48:47:99:3217,123,0	0/0:12,0:12:33.07:0,33,510	0/0:26,0:26:72.22:0,72,1256	0/0:27,0:27:72.06:0,72,1203	1/1:1,31:32:66.23:1716,66,0	1/1:2,21:24:63.22:1648,63,0	1/1:4,28:34:63.22:1661,63,0	0/0:40,0:40:99:0,105,1717	1/1:1,26:27:60.21:1583,60,0	0/0:25,0:25:39.48:0,39,1132	0/0:16,0:16:48.13:0,48,819	1/1:1,28:30:69.24:1813,69,0	1/1:4,37:44:84.29:2208,84,0	1/1:5,38:44:87.26:2292,87,0	1/1:2,28:31:72.25:1899,72,0	1/1:2,31:36:81.28:2135,81,0	0/0:29,0:29:81.25:0,81,1456	1/1:2,13:15:33.11:870,33,0	1/1:4,21:23:62.36:1392,62,0	1/1:1,13:14:39.13:1021,39,0	0/0:55,0:55:99:0,157,2828	1/1:3,22:26:60.21:1567,60,0	1/1:3,16:19:39.13:1007,39,0	1/1:1,30:31:63.18:1662,63,0	1/1:1,14:16:42.14:1100,42,0	0/0:20,0:20:57.20:0,57,1043	1/1:2,25:26:60.16:1520,60,0	0/0:9,0:9:27.09:0,27,496
chr10	88749518	.	GCAGC	G	520.79	PASS	AB=0.637;AC=2;AF=0.036;AN=56;BaseQRankSum=4.463;DP=542;FS=25.124;HRun=0;HaplotypeScore=133.0245;InbreedingCoeff=-0.0413;MQ=57.32;MQ0=11;MQRankSum=-4.211;QD=16.80;ReadPosRankSum=0.277;VQSLOD=1.3695;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,7:10:99:223,0,147	0/0:13,0:13:30.10:0,30,833	0/0:19,0:11:33.11:0,33,925	0/0:11,0:8:24.03:0,24,530	0/0:5,0:5:9.03:0,9,260	0/0:21,0:16:33.11:0,33,911	0/0:40,0:37:96.33:0,96,2773	0/0:9,0:6:18.06:0,18,467	0/1:6,11:16:99:386,0,301	0/0:27,0:23:66.23:0,66,1873	0/0:9,0:9:27.09:0,27,709	0/0:39,0:36:98.55:0,99,2445	0/0:22,0:21:54.19:0,54,1493	0/0:39,0:38:93.32:0,93,2593	0/0:13,0:13:36.12:0,36,1036	0/0:12,0:12:30.10:0,30,867	0/0:28,0:28:84.27:0,84,2277	0/0:16,0:15:48.16:0,48,1328	0/0:11,0:11:31.14:0,31,666	0/0:8,0:8:18.06:0,18,462	0/0:72,0:71:99:0,187,5040	0/0:15,0:13:36.12:0,36,958	0/0:7,0:7:14.34:0,14,366	0/0:29,0:26:62.80:0,63,1694	0/0:16,0:15:36.12:0,36,1027	0/0:15,0:15:45.15:0,45,1249	0/0:10,0:9:24.08:0,24,693	0/0:5,0:5:15.05:0,15,435
chr10	88749523	.	T	TG	261.72	PASS	AB=0.774;AC=3;AF=0.054;AN=56;BaseQRankSum=5.528;DP=560;FS=20.559;HRun=2;HaplotypeScore=112.6957;InbreedingCoeff=-0.0646;MQ=54.95;MQ0=17;MQRankSum=-4.377;QD=5.69;ReadPosRankSum=-0.579;VQSLOD=-0.7154;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:12,7:12:41.99:168,0,42	0/0:14,0:14:27.08:0,27,335	0/0:20,0:10:27.04:0,27,312	0/0:11,0:7:12.04:0,12,149	0/0:5,0:5:8.96:0,9,111	0/0:19,0:14:33.09:0,33,396	0/0:42,0:40:99:0,105,1265	0/0:12,0:8:18.06:0,18,223	0/1:5,11:15:99:172,0,106	0/0:30,0:25:63.16:0,63,765	0/0:6,0:6:12.04:0,12,149	0/0:37,0:34:86.71:0,87,1017	0/0:22,0:21:54.17:0,54,668	0/0:39,0:37:90.28:0,90,1112	0/0:14,0:13:33.10:0,33,409	0/0:13,0:12:30.09:0,30,372	0/0:27,0:27:75.21:0,75,914	0/0:18,0:17:29.59:0,30,594	0/1:11,0:8:21.76:22,0,131	0/0:9,0:9:18.06:0,18,221	0/0:71,0:70:99:0,168,2069	0/0:14,0:13:33.10:0,33,407	0/0:7,0:7:8.82:0,9,111	0/0:32,0:29:57.18:0,57,706	0/0:17,0:16:42.10:0,42,494	0/0:17,0:17:45.14:0,45,557	0/0:11,0:10:24.07:0,24,297	0/0:6,0:6:18.06:0,18,223
chr10	88750412	.	C	CTTCT	5101.26	PASS	AB=0.829;AC=28;AF=0.500;AN=56;BaseQRankSum=7.354;DP=550;FS=28.402;HRun=0;HaplotypeScore=152.8820;InbreedingCoeff=0.7983;MQ=56.26;MQ0=0;MQRankSum=-6.271;QD=16.95;ReadPosRankSum=-1.932;VQSLOD=2.6373;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:18.05:253,18,0	0/0:8,0:8:9.03:0,9,144	0/0:12,0:6:2.22:0,2,7	0/0:12,0:8:0.89:0,1,2	0/0:34,0:34:52.35:0,52,192	0/0:17,0:14:17.67:0,18,65	0/0:22,0:20:25.16:0,25,93	1/1:39,0:39:17.59:376,18,0	1/1:16,0:16:24.08:375,24,0	0/0:25,0:25:39.13:0,39,602	0/0:13,0:13:27.09:0,27,411	0/0:18,0:16:17.77:0,18,66	1/1:16,0:16:27.05:294,27,0	0/0:24,0:20:37.73:0,38,140	1/1:15,0:13:24.03:287,24,0	1/1:13,0:13:15.05:200,15,0	0/0:27,0:27:61.99:0,62,879	0/0:25,0:22:24.87:0,25,99	1/1:21,0:21:34.82:359,35,0	1/1:14,0:15:24.04:242,24,0	1/1:9,0:9:12.04:243,12,0	0/0:11,0:11:17.67:0,18,66	1/1:14,0:15:23.91:285,24,0	1/1:13,0:12:14.96:161,15,0	1/1:27,0:27:51.11:572,51,0	0/1:11,12:23:8.91:730,0,9	1/1:18,0:19:38.88:399,39,0	0/1:36,0:36:10.95:325,0,11
chr10	88750435	.	C	CT	3481.19	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-8.542;DP=554;FS=20.585;HRun=3;HaplotypeScore=121.3302;InbreedingCoeff=0.8612;MQ=44.00;MQ0=13;MQRankSum=2.928;QD=19.67;ReadPosRankSum=2.475;VQSLOD=2.3434;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:17:33.50:0,34,284	0/0:6,0:6:15.05:0,15,180	0/1:28,0:3:2.07:2,0,51	0/0:32,0:6:3.72:0,4,87	1/1:1,35:34:63.21:873,63,0	1/1:2,14:13:21.07:293,21,0	1/1:4,17:18:39.13:542,39,0	0/0:34,0:34:72.14:0,72,792	0/0:3,0:11:9.62:0,10,62	0/0:22,0:22:57.63:0,58,663	0/0:11,0:11:33.10:0,33,394	1/1:0,15:12:21.07:294,21,0	0/0:13,0:13:32.83:0,33,291	1/1:2,21:19:45.15:629,45,0	0/0:13,0:11:29.92:0,30,250	0/0:13,0:13:26.80:0,27,223	0/0:28,0:29:73.29:0,73,840	1/1:6,18:20:33.01:519,33,0	0/0:22,0:21:52.26:0,52,517	0/0:18,0:18:41.48:0,41,335	0/0:7,0:7:0.37:0,0,28	1/1:2,11:11:24.08:328,24,0	0/0:14,0:14:31.95:0,32,259	0/0:13,0:10:23.69:0,24,211	0/0:25,0:24:64.29:0,64,505	0/0:22,0:22:22.77:0,23,359	0/0:19,0:18:41.09:0,41,302	0/0:32,2:33:32.30:0,32,367
chr10	88750439	.	CT	C	3548.77	PASS	AB=0.781;AC=24;AF=0.429;AN=56;BaseQRankSum=8.660;DP=551;FS=40.774;HRun=4;HaplotypeScore=119.5698;InbreedingCoeff=0.6814;MQ=42.70;MQ0=16;MQRankSum=-8.923;QD=15.10;ReadPosRankSum=0.483;VQSLOD=1.0184;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,2:17:23.37:163,23,0	0/0:7,0:6:15.05:0,15,209	0/0:33,0:3:8.24:0,8,85	0/0:38,0:6:9.91:0,10,111	0/0:35,0:33:61.36:0,61,647	0/0:16,0:13:20.93:0,21,233	0/0:18,0:16:38.47:0,38,418	0/1:17,12:29:99:277,0,464	1/1:10,0:10:25.06:193,25,0	0/0:20,0:20:57.66:0,58,787	0/0:12,0:12:33.11:0,33,458	0/0:15,0:12:20.66:0,21,197	1/1:8,7:14:30.01:282,30,0	0/0:22,0:19:44.53:0,45,472	1/1:6,8:12:17.70:219,18,0	1/1:4,8:12:23.82:216,24,0	0/0:30,0:30:64.24:0,64,972	0/0:22,0:18:38.59:0,39,525	1/1:10,13:21:37.05:444,37,0	1/1:1,14:15:42.06:427,42,0	0/1:4,2:6:39.64:42,0,40	0/0:12,0:10:23.81:0,24,261	1/1:6,8:14:29.95:283,30,0	1/1:11,2:10:11.12:148,11,0	0/1:13,13:25:99:354,0,205	0/1:25,0:25:97.65:98,0,399	1/1:4,12:15:42.01:401,42,0	0/0:34,0:32:81.27:0,81,1104
chr10	88750440	.	T	TTTC	6278.63	PASS	AB=0.988;AC=25;AF=0.446;AN=56;BaseQRankSum=7.324;DP=554;FS=31.477;HRun=0;HaplotypeScore=127.6073;InbreedingCoeff=0.6210;MQ=42.51;MQ0=18;MQRankSum=-8.611;QD=22.91;ReadPosRankSum=1.476;VQSLOD=2.8273;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:16.64:316,17,0	0/0:7,0:6:15.05:0,15,237	0/0:35,0:3:8.24:0,8,87	0/1:40,0:6:19.50:19,0,100	0/0:36,0:33:62.17:0,62,848	0/0:16,0:13:21.07:0,21,288	0/0:19,0:17:39.12:0,39,518	0/1:28,0:28:88:88,0,515	1/1:10,0:10:22.17:459,22,0	0/0:20,0:20:57.66:0,58,902	0/0:12,0:12:33.11:0,33,534	0/0:15,0:12:21.05:0,21,291	1/1:14,1:14:30.10:541,30,0	0/0:23,0:20:47.56:0,48,634	1/1:10,4:12:27.09:502,27,0	1/1:9,3:12:24.08:390,24,0	0/0:30,0:30:78.12:0,78,1180	0/0:22,0:18:43.96:0,44,612	1/1:20,3:21:15.12:729,15,0	1/1:15,0:15:42.13:671,42,0	0/1:6,0:6:29.93:100,0,30	0/0:12,0:10:24.08:0,24,350	1/1:14,0:14:30.09:515,30,0	1/1:9,3:9:18.06:275,18,0	0/1:25,1:25:99:747,0,172	0/1:25,0:25:99:220,0,375	1/1:16,0:15:42.05:705,42,0	0/0:33,0:31:80.42:0,80,654
chr10	88750444	.	CT	C	943.98	PASS	AB=0.675;AC=17;AF=0.304;AN=56;BaseQRankSum=12.522;DP=547;FS=10.856;HRun=4;HaplotypeScore=126.0893;InbreedingCoeff=0.5144;MQ=39.99;MQ0=24;MQRankSum=-8.925;QD=5.62;ReadPosRankSum=2.864;VQSLOD=-0.2120;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,5:16:9.99:10,0,171	0/0:7,0:6:15.05:0,15,210	0/0:37,0:2:6.02:0,6,77	0/0:43,0:6:10.57:0,11,112	0/0:33,1:31:42.20:0,42,681	0/0:17,0:14:21.07:0,21,281	0/0:18,0:17:42.10:0,42,557	0/0:28,0:27:50.43:0,50,679	0/1:2,7:9:14.49:51,0,14	0/0:20,0:20:57.19:0,57,791	0/0:13,0:13:30.10:0,30,420	0/0:14,0:11:15.05:0,15,205	1/1:9,6:13:22.90:173,23,0	0/0:22,0:19:48.08:0,48,610	0/1:8,5:11:22.89:116,0,23	1/1:8,3:11:4.31:61,4,0	0/0:28,0:28:53.52:0,54,922	0/0:22,0:18:41.99:0,42,587	0/1:11,10:19:70.38:123,0,70	1/1:8,8:16:15.16:126,15,0	0/0:7,0:7:14.07:0,14,167	0/0:11,0:9:21.07:0,21,293	1/1:7,6:13:12.29:95,12,0	1/1:9,3:9:9.73:51,10,0	0/1:12,14:25:99:161,0,248	0/0:24,0:24:71.39:0,71,879	1/1:5,11:14:23.13:163,23,0	0/0:34,0:32:81.27:0,81,1097
chr10	88750445	.	T	TTTC	3757.57	PASS	AB=0.930;AC=12;AF=0.214;AN=56;BaseQRankSum=11.105;DP=545;FS=20.371;HRun=0;HaplotypeScore=132.1136;InbreedingCoeff=-0.0685;MQ=39.82;MQ0=24;MQRankSum=-9.655;QD=22.50;ReadPosRankSum=2.360;VQSLOD=2.3763;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:16:99:135,0,255	0/0:7,0:6:15.05:0,15,256	0/0:37,0:2:6.02:0,6,98	0/0:42,0:5:11.61:0,12,128	0/0:34,0:31:13.87:0,14,802	0/0:18,0:15:21.07:0,21,338	0/0:18,0:17:42.10:0,42,622	0/0:27,0:26:41.79:0,42,875	0/1:9,0:9:19.08:330,0,19	0/0:20,0:20:57.19:0,57,952	0/0:13,0:13:30.10:0,30,511	0/0:13,0:10:15.51:0,16,247	0/1:15,0:13:2.24:360,0,2	0/0:22,0:19:48.09:0,48,728	0/1:9,4:11:46.45:364,0,46	0/1:8,3:11:80.88:246,0,81	0/0:29,0:29:74.92:0,75,1157	0/0:22,0:18:44.74:0,45,726	0/1:19,0:18:99:442,0,123	0/1:17,0:17:99:320,0,121	0/0:7,0:7:14.81:0,15,138	0/0:11,0:9:21.07:0,21,334	0/1:13,0:13:28.38:324,0,28	0/1:10,2:8:7.45:149,0,7	0/1:26,0:25:99:639,0,300	0/0:24,0:24:71.15:0,71,914	1/1:15,0:13:0.26:450,0,0	0/0:34,0:32:80.42:0,80,643
chr10	88750446	.	T	TC	1563.35	PASS	AB=0.985;AC=12;AF=0.214;AN=56;BaseQRankSum=12.161;DP=548;FS=11.251;HRun=0;HaplotypeScore=123.8220;InbreedingCoeff=-0.0658;MQ=39.66;MQ0=24;MQRankSum=-8.757;QD=9.25;ReadPosRankSum=1.516;VQSLOD=3.7163;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:6.50:6,0,263	0/0:7,0:6:15.05:0,15,210	0/0:37,0:2:6.02:0,6,74	0/0:42,0:5:11.77:0,12,137	0/0:34,0:31:55.40:0,55,723	0/0:18,0:15:21.07:0,21,292	0/0:18,0:17:42.10:0,42,562	0/0:27,0:26:52.93:0,53,865	0/1:9,0:9:19.86:65,0,20	0/0:20,0:20:57.19:0,57,797	0/0:14,1:15:33.09:0,33,444	0/0:13,0:10:18.51:0,19,234	1/1:13,4:15:25.27:186,25,0	0/0:22,0:19:48.08:0,48,613	0/1:13,0:11:75.21:131,0,75	0/1:11,0:11:76.54:120,0,77	0/0:27,2:29:38.41:0,38,929	0/0:22,0:18:44.18:0,44,593	0/1:20,0:18:99:234,0,197	0/1:17,0:17:99:127,0,172	0/0:6,0:6:14.94:0,15,183	0/0:11,0:9:21.07:0,21,291	0/1:13,1:14:81.03:105,0,81	0/1:10,1:7:42.77:43,0,60	0/1:26,0:25:99:458,0,239	0/0:24,0:24:72.23:0,72,988	0/1:15,0:13:23.74:243,0,24	0/0:34,0:32:81.27:0,81,1097
chr10	88750449	.	CT	C	941.20	PASS	AB=0.719;AC=13;AF=0.232;AN=56;BaseQRankSum=11.929;DP=536;FS=9.003;HRun=4;HaplotypeScore=123.8878;InbreedingCoeff=0.0639;MQ=39.22;MQ0=25;MQRankSum=-9.558;QD=5.85;ReadPosRankSum=-0.249;VQSLOD=-0.2850;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,6:14:13.39:13,0,114	0/0:7,0:6:15.05:0,15,210	0/0:37,0:2:6.02:0,6,74	0/0:39,0:4:9.02:0,9,110	0/0:31,1:29:36.96:0,37,626	0/0:18,0:15:18.06:0,18,245	0/0:19,0:18:36.92:0,37,482	0/0:28,0:27:63.15:0,63,814	1/1:1,7:8:7.45:65,7,0	0/0:19,0:19:53.67:0,54,722	0/0:16,0:16:28.95:0,29,408	0/0:13,0:10:12.51:0,13,168	1/1:9,6:13:14.75:132,15,0	0/0:20,0:17:42.05:0,42,539	0/1:9,4:11:50:67,0,50	0/1:6,3:9:8.24:26,0,8	0/0:29,0:29:54.99:0,55,905	0/0:23,0:18:40.06:0,40,584	0/1:12,7:17:88.03:155,0,88	0/1:10,6:17:47.93:121,0,48	0/0:5,1:6:7.36:0,7,154	0/0:11,0:9:18.06:0,18,242	0/1:8,5:14:22.51:79,0,23	0/1:9,2:7:27.74:28,0,39	0/1:13,14:26:99:254,0,255	0/0:24,0:24:71.59:0,72,920	0/1:5,9:13:41.65:161,0,42	0/0:34,0:32:70.78:0,71,377
chr10	88750451	.	T	TC	1101.49	PASS	AB=0.932;AC=18;AF=0.321;AN=56;BaseQRankSum=9.957;DP=535;FS=40.403;HRun=0;HaplotypeScore=125.9463;InbreedingCoeff=0.6302;MQ=38.87;MQ0=29;MQRankSum=-10.651;QD=6.64;ReadPosRankSum=-0.523;VQSLOD=1.4661;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:4.15:0,4,198	0/0:7,0:6:15.05:0,15,210	0/0:37,0:2:6.02:0,6,73	0/0:39,0:4:8.96:0,9,102	0/0:32,0:29:48.59:0,49,649	0/0:16,1:14:18.06:0,18,246	0/0:19,0:18:31.34:0,31,510	0/0:28,0:26:69.17:0,69,896	0/1:8,0:8:20.22:27,0,20	0/0:18,0:18:54.07:0,54,727	0/1:12,4:16:5.28:5,0,379	0/0:13,0:10:15.96:0,16,190	1/1:7,7:12:19.79:121,20,0	0/0:20,0:17:42.12:0,42,567	1/1:13,1:12:20.74:141,21,0	1/1:10,0:10:17.01:147,17,0	0/0:26,2:28:15.56:0,16,887	0/0:23,0:18:43.70:0,44,591	1/1:17,1:15:17.99:185,18,0	1/1:16,0:16:40.01:306,40,0	0/0:6,0:6:14:0,14,173	0/0:10,0:8:18.06:0,18,251	1/1:10,5:15:17.42:137,17,0	0/1:12,1:8:24.14:24,0,44	0/1:28,0:27:92.74:93,0,253	0/0:25,0:25:72.04:0,72,955	1/1:13,1:13:25.33:112,25,0	0/0:34,0:31:78.21:0,78,1021
chr10	88750454	.	CT	C	1434.10	PASS	AB=0.904;AC=17;AF=0.304;AN=56;BaseQRankSum=8.347;DP=532;FS=5.937;HRun=5;HaplotypeScore=121.0735;InbreedingCoeff=-0.0024;MQ=38.26;MQ0=33;MQRankSum=-6.926;QD=6.40;ReadPosRankSum=3.667;VQSLOD=-0.0516;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:13:29.74:30,0,36	0/0:7,0:6:15.04:0,15,184	0/0:37,0:2:6:0,6,62	0/0:39,0:4:9.03:0,9,119	0/0:32,0:29:43.68:0,44,489	0/0:15,2:14:11.93:0,12,150	0/0:18,1:18:6.12:0,6,251	0/0:26,0:24:36.51:0,37,663	1/1:7,0:8:21.77:113,22,0	0/0:18,0:18:50.60:0,51,614	0/0:16,0:16:33.60:0,34,368	0/0:12,0:9:12.03:0,12,139	0/1:15,0:13:27.07:63,0,27	0/1:17,1:15:0.56:1,0,282	0/1:11,2:11:75.67:110,0,76	0/1:11,0:11:41.77:42,0,75	0/0:27,0:27:65.69:0,66,788	0/0:23,0:18:39.04:0,39,449	0/1:16,2:15:26.99:112,0,27	0/1:14,2:16:40.83:41,0,88	0/1:5,2:7:16.50:16,0,83	0/0:11,1:8:10.47:0,10,112	0/1:15,1:16:21.77:104,0,22	1/1:10,2:8:0.73:45,1,0	0/1:28,0:26:43.45:43,0,240	0/0:23,0:23:2.61:0,3,465	0/1:12,2:13:9.76:83,0,10	1/1:7,26:30:54.92:795,55,0
chr10	88750457	.	T	TTC	1614.77	PASS	AB=0.975;AC=19;AF=0.339;AN=56;BaseQRankSum=8.521;DP=543;FS=14.497;HRun=0;HaplotypeScore=126.6400;InbreedingCoeff=0.0630;MQ=37.31;MQ0=42;MQRankSum=-7.468;QD=6.12;ReadPosRankSum=2.246;VQSLOD=2.3230;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:10:29.61:30,0,30	0/0:5,0:6:15.04:0,15,184	0/0:36,0:2:6:0,6,62	0/0:38,0:4:9.03:0,9,119	0/0:33,0:30:44.07:0,44,459	0/0:17,0:14:12.03:0,12,137	0/1:19,0:18:8.92:9,0,229	0/0:28,0:24:19.77:0,20,605	1/1:8,0:8:21.77:113,22,0	0/0:19,0:19:33.56:0,34,519	0/0:17,0:16:26.39:0,26,337	0/1:12,0:9:2.23:2,0,104	0/1:14,0:12:15.43:63,0,15	0/0:16,0:13:11.49:0,11,277	0/1:14,0:12:4.28:135,0,4	0/1:10,1:11:21.35:78,0,21	0/0:28,0:27:65.69:0,66,791	0/0:24,0:19:40.32:0,40,476	1/1:21,1:17:8.04:160,8,0	0/1:15,0:15:40.06:40,0,66	0/1:7,0:8:17.44:17,0,57	0/0:16,0:10:6.14:0,6,92	0/1:18,0:18:2.37:112,0,2	0/1:11,2:8:4.33:44,0,4	0/1:26,0:24:60.19:60,0,240	0/1:25,0:23:13.44:13,0,349	0/1:13,0:11:5.14:81,0,5	1/1:34,0:30:74.88:826,75,0
chr10	88750465	.	TC	T	1080.27	PASS	AB=0.762;AC=11;AF=0.196;AN=56;BaseQRankSum=11.163;DP=535;FS=14.113;HRun=1;HaplotypeScore=111.7208;InbreedingCoeff=-0.2534;MQ=36.78;MQ0=53;MQRankSum=-8.172;QD=6.79;ReadPosRankSum=-1.338;VQSLOD=-0.7007;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,3:9:12.73:13,0,234	0/0:7,0:6:15.05:0,15,200	0/0:32,0:2:6.02:0,6,73	0/0:35,0:3:6.02:0,6,75	0/0:30,0:27:39.13:0,39,551	0/0:20,0:15:15.03:0,15,199	0/0:20,0:18:36.91:0,37,517	0/0:27,0:18:54.15:0,54,729	0/1:1,7:8:18.66:126,0,19	0/0:18,0:17:46.69:0,47,602	0/0:15,0:14:36.11:0,36,507	0/0:12,0:9:14.82:0,15,168	0/1:9,3:10:72.53:73,0,110	0/0:14,0:11:25.97:0,26,316	0/1:10,4:12:86.55:87,0,240	0/1:7,3:9:12.66:13,0,202	0/0:29,0:28:68.78:0,69,885	0/0:25,0:20:51.14:0,51,691	0/1:14,5:14:99:210,0,261	0/1:13,3:16:80.15:80,0,415	0/0:8,0:8:19.77:0,20,266	0/0:21,0:12:20.98:0,21,276	0/1:14,5:18:83.10:83,0,305	0/1:12,1:8:43.53:44,0,51	0/1:14,11:23:99:284,0,429	0/0:27,0:25:74.44:0,74,951	0/1:6,6:10:94.53:216,0,95	0/0:34,0:31:77.17:0,77,576
chr10	88750553	.	CTCT	C	400.57	PASS	AB=0.858;AC=7;AF=0.125;AN=56;BaseQRankSum=7.653;DP=393;FS=17.131;HRun=0;HaplotypeScore=92.4618;InbreedingCoeff=-0.1566;MQ=36.09;MQ0=24;MQRankSum=-5.622;QD=3.18;ReadPosRankSum=1.543;VQSLOD=0.8109;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:3:2.60:0,3,10	0/1:3,1:4:36.90:37,0,179	0/0:27,0:5:12:0,12,164	0/0:34,0:10:14.76:0,15,364	0/0:14,2:8:5.11:0,5,226	0/0:11,0:8:15.05:0,15,262	0/0:8,0:5:15.05:0,15,349	0/0:16,0:11:30.10:0,30,667	0/1:7,0:7:22.93:61,0,23	0/0:17,0:17:50.95:0,51,1082	0/1:13,2:14:25.06:25,0,672	0/0:8,0:5:12.04:0,12,259	0/0:4,0:4:11.91:0,12,228	0/0:10,0:7:18.06:0,18,302	0/0:11,0:8:18.06:0,18,402	0/0:8,0:7:18.06:0,18,340	0/0:20,0:18:48.06:0,48,945	0/0:12,0:8:18.03:0,18,321	0/0:8,0:4:8.99:0,9,161	0/1:22,5:21:99:106,0,779	0/0:12,0:11:27.09:0,27,610	0/0:14,0:11:15.04:0,15,295	0/0:10,3:8:18.06:0,18,423	0/0:7,0:7:12.04:0,12,266	0/1:8,5:9:78.98:79,0,144	0/1:32,2:27:23.23:23,0,1477	0/0:7,0:4:12.04:0,12,234	0/1:20,6:24:99:198,0,884
chr10	88750576	.	TCTC	T	394.54	PASS	AB=0.954;AC=13;AF=0.232;AN=56;BaseQRankSum=8.361;DP=323;FS=36.544;HRun=0;HaplotypeScore=85.5900;InbreedingCoeff=-0.1632;MQ=39.62;MQ0=18;MQRankSum=-6.671;QD=2.36;ReadPosRankSum=3.594;VQSLOD=-0.0482;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:1:2.04:0,2,6	0/1:5,0:4:23.47:23,0,123	0/0:25,0:3:9.03:0,9,166	0/0:26,0:8:17.95:0,18,281	0/1:15,4:12:51.86:52,0,93	0/1:9,0:6:1.41:1,0,37	0/1:6,1:4:27.36:27,0,79	0/0:6,0:2:6.02:0,6,126	0/1:6,0:6:36.12:64,0,36	0/0:16,0:16:47.44:0,47,907	0/1:15,0:15:22.66:23,0,504	0/0:9,1:6:7.10:0,7,55	0/0:5,0:4:12.04:0,12,185	0/1:12,0:8:10.53:11,0,38	0/0:6,0:5:5.95:0,6,49	0/0:3,0:2:5.99:0,6,49	0/0:10,0:10:30.09:0,30,609	0/0:7,0:4:2.02:0,2,5	0/0:5,0:1:2.97:0,3,20	0/1:26,0:20:98.47:98,0,257	0/0:13,0:12:33.07:0,33,609	0/0:6,1:5:4.24:0,4,102	0/0:8,1:5:6.01:0,6,80	0/0:6,0:6:8.89:0,9,72	0/1:11,4:11:2.20:107,0,2	0/1:21,0:20:15.30:15,0,1024	1/1:3,0:2:2.04:6,2,0	0/1:29,0:27:99:104,0,820
chr10	88750589	.	C	CT	874.69	PASS	AB=1.000;AC=23;AF=0.426;AN=54;BaseQRankSum=1.954;DP=295;FS=6.147;HRun=1;HaplotypeScore=79.7128;InbreedingCoeff=0.4477;MQ=40.80;MQ0=14;MQRankSum=-4.549;QD=7.48;ReadPosRankSum=-2.192;VQSLOD=-0.1845;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:2,0:1:0:0,0,0	0/0:4,0:3:8.06:0,8,84	0/0:25,0:2:3.01:0,3,39	0/0:23,1:10:16.59:0,17,177	0/1:22,0:15:57.93:58,0,63	1/1:7,0:4:12:118,12,0	0/0:6,0:3:3:0,3,26	0/0:5,0:2:5.98:0,6,59	0/0:4,0:4:9.21:0,9,65	0/0:16,0:16:48.16:0,48,623	0/0:12,0:12:29.89:0,30,330	1/1:12,0:8:8.40:72,8,0	1/1:3,0:2:3.01:43,3,0	1/1:10,0:6:14.97:141,15,0	1/1:1,1:2:1.82:40,2,0	1/1:1,1:1:3:27,3,0	0/0:11,0:11:27.56:0,28,350	0/0:7,0:3:3:0,3,27	./.	1/1:19,3:18:26.50:307,26,0	0/0:12,0:11:30.10:0,30,390	0/1:8,0:6:43.16:47,0,43	0/1:8,0:5:0.60:17,0,1	1/1:0,2:2:2.97:20,3,0	0/1:15,0:12:92.28:139,0,92	0/0:22,0:21:50.86:0,51,590	1/1:2,0:1:2.90:16,3,0	0/0:24,0:23:47.98:0,48,535
chr10	88750595	.	CTACT	C	1190.08	PASS	AB=0.899;AC=28;AF=0.560;AN=50;BaseQRankSum=6.071;DP=260;FS=25.706;HRun=0;HaplotypeScore=83.9508;InbreedingCoeff=-0.0100;MQ=41.51;MQ0=4;MQRankSum=-5.735;QD=6.96;ReadPosRankSum=-2.111;VQSLOD=-0.2093;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:3,0:3:32.41:32,0,93	0/0:24,0:1:3.01:0,3,38	0/0:21,0:9:5.18:0,5,126	0/1:19,3:16:68.18:68,0,76	1/1:2,4:3:9.03:128,9,0	1/1:3,2:2:2.50:9,2,0	0/0:3,0:1:3.01:0,3,59	0/1:3,0:3:7.35:7,0,8	0/0:16,0:16:45.15:0,45,624	0/1:10,0:10:43.27:43,0,236	1/1:7,3:6:5.05:48,5,0	1/1:1,0:1:3.01:30,3,0	1/1:3,6:6:14.78:184,15,0	1/1:2,0:2:5.81:47,6,0	1/1:2,0:1:2.98:21,3,0	0/0:9,0:9:24.08:0,24,338	1/1:3,2:2:2.92:17,3,0	./.	1/1:11,10:17:29.45:255,29,0	0/0:11,0:11:30.10:0,30,401	0/1:6,2:6:31.78:98,0,32	0/1:6,1:4:21.26:35,0,21	./.	0/1:12,3:12:86.79:106,0,87	0/1:17,0:16:35.86:36,0,432	0/1:1,2:2:28.41:38,0,28	0/1:21,0:21:99:144,0,344
chr10	88750596	.	TAC	T	248.90	PASS	AB=0.937;AC=21;AF=0.420;AN=50;BaseQRankSum=6.564;DP=255;FS=12.212;HRun=0;HaplotypeScore=79.9309;InbreedingCoeff=0.0504;MQ=41.53;MQ0=3;MQRankSum=-4.506;QD=1.44;ReadPosRankSum=-0.356;VQSLOD=0.7524;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:2,1:3:26.65:27,0,74	0/0:23,0:1:3.01:0,3,41	0/1:20,0:9:0.26:0,0,139	0/1:22,0:16:2.72:3,0,119	1/1:6,0:3:7.79:31,8,0	0/0:5,0:2:3:0,3,29	0/0:3,0:1:3.01:0,3,37	0/0:2,0:2:5.34:0,5,29	0/0:16,0:16:48.13:0,48,571	0/1:8,2:10:29.77:30,0,186	1/1:10,0:6:2.50:9,2,0	0/0:1,0:1:0.89:0,1,2	1/1:10,0:6:11.11:52,11,0	0/1:2,0:2:0.08:2,0,0	1/1:1,0:1:2.50:9,2,0	0/0:9,0:9:24.08:0,24,326	1/1:4,0:2:3:45,3,0	./.	0/1:20,0:16:4.84:7,0,5	0/0:11,0:11:30.10:0,30,394	0/1:8,0:6:8.37:8,0,78	0/0:7,0:4:4.25:0,4,30	./.	0/1:15,0:12:0.67:1,0,144	0/1:14,2:15:36.87:37,0,387	0/1:3,0:2:6.59:7,0,24	0/1:18,3:21:99:119,0,367
chr10	88750642	.	TGCG	T	1581.20	PASS	AB=0.708;AC=36;AF=0.857;AN=42;BaseQRankSum=-0.600;DP=160;FS=4.814;HRun=0;HaplotypeScore=39.6467;InbreedingCoeff=0.2694;MQ=30.83;MQ0=17;MQRankSum=1.034;QD=15.50;ReadPosRankSum=0.421;VQSLOD=2.4881;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,0:1:3.01:42,3,0	0/0:28,0:2:5.84:0,6,35	0/0:18,0:2:5.72:0,6,29	0/1:9,9:15:2.10:117,0,2	./.	./.	1/1:6,0:4:12.01:110,12,0	1/1:1,1:1:3.01:38,3,0	1/1:4,2:4:12.02:153,12,0	./.	0/1:4,2:5:3.78:21,0,4	1/1:1,0:1:2.50:9,2,0	./.	1/1:3,0:3:3.81:19,4,0	1/1:0,0:2:2.98:21,3,0	1/1:5,2:7:18.01:212,18,0	./.	./.	1/1:2,5:7:5.98:55,6,0	1/1:5,0:5:9.03:126,9,0	1/1:3,3:3:6.02:77,6,0	1/1:1,1:2:5.97:57,6,0	1/1:0,0:1:2.74:12,3,0	1/1:3,3:6:11.95:116,12,0	1/1:8,1:9:17:211,17,0	1/1:0,0:1:2.50:9,2,0	1/1:5,4:9:18.06:285,18,0
chr10	88752467	.	T	TA	922.54	PASS	AB=0.750;AC=27;AF=0.540;AN=50;BaseQRankSum=-4.151;DP=264;FS=0.000;HRun=14;HaplotypeScore=42.1163;InbreedingCoeff=0.0836;MQ=40.13;MQ0=21;MQRankSum=-1.967;QD=5.30;ReadPosRankSum=-1.561;VQSLOD=0.8988;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,1:8:11.57:12,0,61	1/1:0,0:5:11.36:56,11,0	./.	./.	1/1:4,9:11:17.95:151,18,0	0/1:6,3:9:20.57:82,0,21	1/1:4,2:6:6.47:54,6,0	0/1:12,4:15:55.50:56,0,67	0/1:4,3:7:26.49:41,0,26	1/1:3,1:4:5.68:37,6,0	1/1:6,0:8:3.31:15,3,0	1/1:5,3:7:9:79,9,0	0/1:11,2:12:10.23:43,0,10	1/1:7,7:13:12:106,12,0	0/0:10,0:10:23.60:0,24,153	0/0:5,0:5:11.82:0,12,77	0/1:4,3:9:3.89:79,0,4	1/1:0,3:3:9:79,9,0	0/1:9,2:12:43.22:43,0,72	0/0:18,0:18:23.64:0,24,153	./.	0/1:2,3:4:7.27:67,0,7	0/0:13,0:13:16.59:0,17,160	0/1:2,2:4:26.42:41,0,26	0/0:12,0:12:29.56:0,30,192	0/1:12,3:13:10.27:44,0,10	0/0:16,1:17:6.62:0,7,166	0/1:7,6:13:5.15:5,0,95
chr10	88754389	.	A	AT	4356.74	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-12.493;DP=524;FS=4.237;HRun=5;HaplotypeScore=54.2414;InbreedingCoeff=0.9669;MQ=69.59;MQ0=0;MQRankSum=-0.809;QD=33.01;ReadPosRankSum=-0.793;VQSLOD=5.0761;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:22.30:0,22,229	0/0:8,0:8:21.05:0,21,226	0/0:10,0:10:21.04:0,21,214	0/0:2,0:2:0.89:0,1,2	1/1:1,28:29:75.16:947,75,0	1/1:0,22:22:63.20:829,63,0	1/1:0,20:20:57.18:748,57,0	0/0:36,0:35:99:0,102,1096	0/0:22,0:22:66.17:0,66,709	0/0:24,0:24:66.15:0,66,696	0/0:22,0:22:63.08:0,63,655	1/1:2,10:12:27.09:355,27,0	0/0:19,0:19:57.14:0,57,612	1/1:4,17:21:48.16:632,48,0	0/0:25,0:25:75.17:0,75,797	0/0:18,0:18:54.14:0,54,580	0/0:24,0:24:63.09:0,63,662	1/1:3,11:14:30.06:372,30,0	0/0:20,0:20:51.12:0,51,542	0/0:27,0:27:63.15:0,63,677	0/0:11,0:11:30.07:0,30,322	1/1:0,14:14:36.12:474,36,0	0/0:25,0:25:63.16:0,63,677	0/0:15,0:15:45.11:0,45,484	0/0:23,0:23:63.14:0,63,669	0/0:20,0:20:54.14:0,54,580	0/0:17,0:17:48.12:0,48,516	0/0:15,0:15:42.11:0,42,451
chr10	88754435	.	T	TTGAA	8932.73	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-13.061;DP=541;FS=4.839;HRun=0;HaplotypeScore=93.0140;InbreedingCoeff=0.9631;MQ=65.74;MQ0=0;MQRankSum=-4.528;QD=48.29;ReadPosRankSum=-3.207;VQSLOD=4.7350;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:12.04:0,12,201	1/1:2,4:6:15.01:316,15,0	0/0:13,0:13:4.44:0,4,356	0/0:6,0:6:11.97:0,12,134	0/0:25,0:25:66.21:0,66,1078	0/0:21,0:21:42.13:0,42,677	0/0:19,0:19:36.12:0,36,602	1/1:26,19:48:81.25:1745,81,0	0/0:19,0:19:39.12:0,39,627	1/1:8,16:27:60.16:1319,60,0	1/1:6,17:23:51.17:1199,51,0	0/0:10,0:10:24.08:0,24,399	0/0:16,0:16:33.11:0,33,546	0/0:22,0:22:42.14:0,42,702	0/0:22,0:22:54.17:0,54,878	0/0:15,0:15:33.11:0,33,552	1/1:9,11:20:39.13:915,39,0	0/0:14,0:14:33.09:0,33,523	0/0:19,0:19:30.10:0,30,497	0/0:38,0:38:93.30:0,93,1506	1/1:1,9:10:24.04:539,24,0	0/0:15,0:15:36.12:0,36,596	0/0:25,0:25:50.94:0,51,793	0/0:9,0:9:27.09:0,27,451	0/0:20,0:20:33.09:0,33,525	1/1:4,20:24:69.24:1638,69,0	0/0:21,0:21:42.10:0,42,649	1/1:7,19:26:51.18:1261,51,0
chr10	88754492	.	T	TTA	7787.70	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-12.338;DP=412;FS=0.000;HRun=0;HaplotypeScore=55.7111;InbreedingCoeff=0.9238;MQ=74.53;MQ0=1;MQRankSum=0.255;QD=33.00;ReadPosRankSum=4.682;VQSLOD=6.4073;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,8:10:21.07:347,21,0	0/0:8,0:8:21.07:0,21,262	0/0:9,0:9:6.02:0,6,72	0/0:8,0:7:8.86:0,9,90	1/1:3,23:26:66.23:1086,66,0	1/1:2,12:13:30.10:495,30,0	1/1:4,6:10:18.06:297,18,0	0/0:29,0:29:60.19:0,60,750	1/1:2,2:4:3.01:50,3,0	0/0:25,0:25:54.15:0,54,661	0/0:17,0:17:42.12:0,42,511	1/1:3,8:11:21.07:347,21,0	1/1:4,14:18:42.14:687,42,0	1/1:3,13:16:30.10:495,30,0	1/1:4,13:17:30.10:495,30,0	1/1:3,13:16:33.11:545,33,0	0/0:15,0:15:30.10:0,30,375	1/1:3,6:9:18.06:297,18,0	1/1:8,10:18:32.46:477,32,0	1/1:6,18:26:51.17:830,51,0	0/0:11,0:11:24.03:0,24,283	1/1:1,3:4:6.02:99,6,0	1/1:4,12:16:33.11:545,33,0	1/1:1,3:4:9.03:149,9,0	0/0:13,0:13:39.12:0,39,488	0/0:21,0:21:45.13:0,45,550	1/1:1,16:17:33.11:545,33,0	0/0:20,0:20:51.15:0,51,626
chr10	88754899	.	CCCTT	C	2020.85	PASS	AB=1.000;AC=30;AF=0.577;AN=52;BaseQRankSum=6.244;DP=291;FS=1.470;HRun=0;HaplotypeScore=78.8034;InbreedingCoeff=0.6942;MQ=55.89;MQ0=3;MQRankSum=-0.078;QD=11.42;ReadPosRankSum=0.048;VQSLOD=3.0043;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,16:24:17.46:428,17,0	0/0:7,0:7:12.01:0,12,195	0/0:19,0:9:8.14:0,8,95	0/0:20,0:13:9.91:0,10,133	1/1:7,0:7:8.98:73,9,0	./.	1/1:8,0:8:12.30:90,12,0	0/1:11,0:10:0.29:23,0,0	1/1:3,9:12:12.04:196,12,0	0/0:17,0:17:36.09:0,36,665	0/0:12,0:12:30.06:0,30,539	0/0:8,0:8:9.47:0,9,110	1/1:11,0:11:23.99:219,24,0	0/1:5,0:5:20.66:40,0,21	1/1:15,0:15:26.94:229,27,0	1/1:6,0:6:17.99:165,18,0	0/0:12,0:12:26.52:0,27,440	1/1:2,0:2:2.46:24,2,0	1/1:13,0:12:2.97:20,3,0	1/1:11,0:18:14.91:116,15,0	0/0:3,0:3:5.97:0,6,45	1/1:3,0:3:5.74:37,6,0	1/1:5,0:9:8.42:76,8,0	1/1:12,0:12:11.97:102,12,0	0/0:4,0:10:12.03:0,12,185	./.	1/1:21,0:21:46.46:373,46,0	0/0:1,0:1:3:0,3,26
chr10	88754904	.	CCTTCCTT	C	2320.44	PASS	AB=0.950;AC=17;AF=0.315;AN=54;BaseQRankSum=7.053;DP=289;FS=2.735;HRun=0;HaplotypeScore=95.8975;InbreedingCoeff=0.3431;MQ=54.01;MQ0=3;MQRankSum=-1.970;QD=18.87;ReadPosRankSum=1.754;VQSLOD=2.7580;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:56.95:0,57,698	0/0:6,0:6:18.05:0,18,509	0/0:19,0:10:27.09:0,27,648	0/0:17,0:11:19.06:0,19,548	0/1:7,0:7:15.59:16,0,51	0/0:2,0:2:5.74:0,6,30	0/1:8,0:8:22.19:22,0,42	0/0:12,0:11:20.54:0,21,236	0/0:12,0:12:17.93:0,18,158	0/0:17,0:17:51.16:0,51,1543	0/0:12,0:12:33.11:0,33,1187	0/0:8,0:8:23.62:0,24,339	1/1:9,4:13:19.04:485,19,0	0/0:5,0:5:2.19:0,2,119	1/1:8,5:13:19.61:420,20,0	1/1:2,4:6:18.03:297,18,0	0/0:14,0:14:42.13:0,42,1217	0/1:2,0:2:6.95:7,0,56	0/1:13,0:12:3.13:3,0,93	1/1:15,2:17:3.43:220,3,0	0/0:4,0:4:9.49:0,9,170	0/1:2,0:2:6.03:6,0,18	1/1:6,3:9:2.48:152,2,0	0/1:11,1:12:49.18:164,0,49	0/0:11,0:11:24.08:0,24,606	./.	0/1:13,8:21:1.90:695,0,2	0/0:1,0:1:3.01:0,3,95
chr10	88754970	.	TG	T	1493.71	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=5.640;DP=302;FS=43.979;HRun=7;HaplotypeScore=62.8758;InbreedingCoeff=0.8677;MQ=77.28;MQ0=0;MQRankSum=0.637;QD=19.40;ReadPosRankSum=0.193;VQSLOD=0.9097;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:33.09:0,33,402	0/0:5,0:5:15.05:0,15,189	0/0:20,0:19:20.95:0,21,359	0/1:15,0:13:5.74:6,0,132	1/1:0,16:16:48.11:490,48,0	1/1:0,7:7:18.04:184,18,0	1/1:3,10:13:27.06:276,27,0	0/0:3,0:3:6.02:0,6,75	0/0:16,0:16:39.12:0,39,491	0/0:22,0:22:63.20:0,63,792	0/0:11,0:11:30.10:0,30,377	1/1:1,5:6:15.03:153,15,0	0/0:14,0:14:42.12:0,42,514	1/1:0,7:7:21.05:214,21,0	0/0:10,0:10:24.08:0,24,301	0/0:10,0:10:24.08:0,24,302	0/0:11,0:11:27.09:0,27,340	1/1:0,7:7:21.05:214,21,0	0/0:9,0:9:27.05:0,27,321	0/0:16,0:16:48.15:0,48,602	0/0:5,0:5:12.04:0,12,151	1/1:1,5:6:15.03:153,15,0	0/0:8,0:8:12.04:0,12,146	0/0:13,0:13:30.10:0,30,377	0/0:14,0:14:36.08:0,36,436	0/0:6,0:6:18.06:0,18,226	0/0:14,0:14:30.10:0,30,376	0/0:2,0:2:6.02:0,6,75
chr10	88755037	.	T	TCC	3763.77	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=0.434;DP=379;FS=0.571;HRun=7;HaplotypeScore=66.2694;InbreedingCoeff=0.9361;MQ=76.66;MQ0=0;MQRankSum=-2.930;QD=27.67;ReadPosRankSum=-0.730;VQSLOD=3.0733;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.18:0,75,850	0/0:7,0:7:21.06:0,21,244	0/0:17,0:17:25.71:0,26,302	0/0:22,0:21:43.14:0,43,463	0/0:16,0:16:39.10:0,39,454	0/0:12,0:12:32.31:0,32,355	0/0:17,0:17:42.12:0,42,487	1/1:9,3:13:23.50:279,23,0	0/0:13,0:13:39.12:0,39,454	0/0:20,0:20:45.12:0,45,523	0/0:6,0:6:15.04:0,15,175	0/0:18,0:18:39.09:0,39,454	1/1:1,9:10:18.06:295,18,0	0/0:9,0:9:24.07:0,24,280	1/1:2,8:10:12.04:197,12,0	1/1:2,12:14:24.08:392,24,0	0/0:21,0:21:51.10:0,51,579	0/0:18,0:18:45.12:0,45,524	1/1:4,9:14:30.47:440,30,0	1/1:3,10:14:33.80:462,34,0	1/1:1,5:6:3.01:49,3,0	0/0:11,0:11:24.06:0,24,280	1/1:4,6:10:11.98:195,12,0	1/1:1,11:13:30.10:472,30,0	0/0:8,0:8:24.07:0,24,280	1/1:0,12:12:36.11:558,36,0	1/1:1,14:15:24.08:384,24,0	1/1:1,4:5:3.01:40,3,0
chr10	88756124	.	A	AT	6862.90	PASS	AB=0.545;AC=25;AF=0.446;AN=56;BaseQRankSum=-14.000;DP=439;FS=14.909;HRun=7;HaplotypeScore=41.2198;InbreedingCoeff=0.9138;MQ=76.39;MQ0=0;MQRankSum=-1.328;QD=32.99;ReadPosRankSum=-0.390;VQSLOD=2.9672;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:54.17:652,54,0	0/0:7,0:7:21.03:0,21,203	0/0:11,0:11:12.01:0,12,116	0/0:8,0:8:8.97:0,9,77	1/1:0,15:15:39.04:438,39,0	1/1:0,19:19:57.17:689,57,0	1/1:1,10:11:27.08:326,27,0	1/1:3,21:24:63.16:735,63,0	1/1:0,8:8:24.07:290,24,0	0/0:15,0:15:42.06:0,42,405	0/0:16,0:16:48.08:0,48,463	1/1:0,7:7:21.06:254,21,0	0/0:22,0:22:60.09:0,60,579	1/1:0,17:17:51.16:616,51,0	0/0:19,0:19:57.09:0,57,551	0/0:15,0:14:42.05:0,42,399	0/0:18,0:18:45.07:0,45,435	1/1:1,16:17:42.13:507,42,0	0/0:9,0:9:18.01:0,18,169	0/0:17,0:17:45.06:0,45,434	1/1:0,17:17:48.15:580,48,0	1/1:0,16:16:45.14:544,45,0	0/0:17,0:17:42.05:0,42,406	0/0:9,0:9:27.04:0,27,261	0/0:23,0:23:63.07:0,63,601	0/1:2,10:12:17.72:326,0,18	0/0:25,0:24:75.12:0,75,724	1/1:0,25:25:75.23:906,75,0
chr10	88756433	.	A	AT	10354.09	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-15.034;DP=658;FS=6.224;HRun=1;HaplotypeScore=60.1202;InbreedingCoeff=0.9997;MQ=79.64;MQ0=0;MQRankSum=-2.026;QD=38.93;ReadPosRankSum=4.277;VQSLOD=5.4016;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:72.24:1078,72,0	0/0:12,0:12:33.11:0,33,428	0/0:23,0:23:56.36:0,56,658	0/0:12,0:12:26.67:0,27,255	0/0:26,0:26:72.23:0,72,934	0/0:29,0:29:81.26:0,81,1050	0/0:20,0:20:60.15:0,60,757	0/0:26,0:26:78.25:0,78,999	1/1:1,21:22:57.19:854,57,0	0/0:29,0:29:81.25:0,81,1030	0/0:17,0:17:51.17:0,51,661	0/0:22,0:22:66.21:0,66,843	1/1:2,27:29:81.27:1214,81,0	0/0:27,0:27:81.25:0,81,1036	1/1:0,32:32:96.33:1438,96,0	1/1:2,22:24:57.19:854,57,0	0/0:17,0:17:51.12:0,51,618	0/0:17,0:17:45.09:0,45,564	1/1:3,14:17:42.14:613,42,0	1/1:0,24:24:69.13:981,69,0	0/0:17,0:17:51.16:0,51,650	0/0:26,0:26:75.13:0,75,895	1/1:3,28:31:74.97:1121,75,0	1/1:0,13:13:33.11:494,33,0	0/0:26,0:26:72.22:0,72,920	0/0:31,0:31:93.29:0,93,1182	1/1:3,43:46:99:1707,114,0	0/0:15,0:15:45.15:0,45,584
chr10	88756729	.	ACAGCAGCTGGGGCGGCAGCAGCTAGAAATG	A	4630.15	PASS	AC=18;AF=0.333;AN=54;BaseQRankSum=7.708;DP=596;FS=16.080;HRun=0;HaplotypeScore=399.5705;InbreedingCoeff=0.9023;MQ=66.33;MQ0=3;MQRankSum=-7.067;QD=35.62;ReadPosRankSum=2.475;VQSLOD=1.4545;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,20:28:17.93:772,18,0	0/0:10,0:10:20.10:0,20,1284	0/0:14,0:10:23.97:0,24,929	0/0:29,0:28:58.49:0,58,1810	0/0:14,0:14:27.07:0,27,669	0/0:13,0:13:30.10:0,30,1463	0/0:50,0:50:99:0,132,8425	0/0:25,0:24:69.22:0,69,2826	1/1:6,10:16:12.04:936,12,0	0/0:19,0:18:42.13:0,42,1729	0/0:8,0:8:21.06:0,21,570	0/0:39,0:39:96.29:0,96,8024	1/1:1,13:14:12.04:860,12,0	0/0:45,0:45:99:0,117,11081	1/1:4,11:15:6.02:369,6,0	1/1:2,9:11:9.03:701,9,0	0/0:35,0:35:93.27:0,93,7768	0/0:25,0:25:72.23:0,72,5419	1/1:10,6:16:18.04:437,18,0	./.	0/0:71,0:71:99:0,172,12677	0/0:12,0:11:30.02:0,30,871	1/1:3,2:5:9.03:315,9,0	1/1:0,20:20:3.01:166,3,0	0/0:19,0:18:30.09:0,30,1805	0/0:23,0:23:60.18:0,60,2031	1/1:5,0:5:6.01:75,6,0	0/0:8,0:8:24.03:0,24,744
chr10	88756968	.	C	CACAGCAGATGGGACG	11188.40	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-5.339;DP=584;FS=26.416;HRun=0;HaplotypeScore=187.9140;InbreedingCoeff=0.9126;MQ=55.18;MQ0=23;MQRankSum=-11.424;QD=47.01;ReadPosRankSum=-0.489;VQSLOD=2.9458;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,8:21:15.05:754,15,0	1/1:0,3:6:6.02:381,6,0	0/0:10,0:6:18.06:0,18,573	0/0:16,0:12:35.32:0,35,835	0/0:5,0:5:12.03:0,12,297	0/0:13,0:13:39.13:0,39,1412	0/0:41,0:40:99:0,105,3664	0/0:26,0:25:69.20:0,69,2177	1/1:4,13:21:27.09:1804,27,0	1/1:7,8:23:25.77:1046,26,0	1/1:10,0:10:8.97:194,9,0	0/0:29,0:28:69.13:0,69,2876	1/1:4,14:19:30.10:1752,30,0	0/0:42,0:42:99:0,108,4351	1/1:1,5:9:12.04:879,12,0	1/1:1,10:20:23.84:1468,24,0	1/1:6,12:21:14.64:946,15,0	0/0:32,0:32:84.22:0,84,2939	1/1:14,0:10:20.87:439,21,0	1/1:2,4:7:3.48:215,3,0	0/0:90,0:84:99:0,208,7391	0/0:7,0:6:18.06:0,18,729	1/1:12,0:12:9.03:186,9,0	1/1:4,12:29:8.79:600,9,0	0/0:14,0:14:38.43:0,38,1364	0/0:15,0:15:33.11:0,33,1273	1/1:3,5:12:9.03:524,9,0	0/0:6,0:6:15.05:0,15,488
chr10	88757570	.	TAG	T	2090.05	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-5.126;DP=528;FS=16.671;HRun=0;HaplotypeScore=117.3908;InbreedingCoeff=0.8056;MQ=71.96;MQ0=9;MQRankSum=2.368;QD=25.80;ReadPosRankSum=-3.642;VQSLOD=2.9044;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:45.13:0,45,671	0/0:3,0:3:9.03:0,9,148	0/0:36,0:21:50.20:0,50,842	0/0:45,0:27:55.04:0,55,1026	0/0:18,0:18:33.10:0,33,495	0/0:15,0:14:27.05:0,27,420	0/0:22,0:22:48.12:0,48,686	1/1:0,28:27:72.83:1020,73,0	0/0:13,0:13:35.96:0,36,483	0/0:9,0:9:23.44:0,23,381	0/0:7,0:7:15.05:0,15,245	0/0:12,0:12:27.94:0,28,384	0/0:25,0:25:46.46:0,46,457	0/0:13,0:13:24.05:0,24,336	0/0:27,0:27:61.40:0,61,731	0/0:28,0:28:65.86:0,66,881	0/0:22,0:22:48.48:0,48,683	0/0:14,0:14:39.11:0,39,541	0/0:19,0:19:46:0,46,723	0/0:15,0:15:32.77:0,33,414	1/1:21,0:21:24.08:342,24,0	0/0:7,0:7:14.72:0,15,232	0/0:17,0:17:41.30:0,41,488	0/0:31,0:31:80.66:0,81,718	0/0:9,0:9:15.05:0,15,247	1/1:23,0:23:56.55:767,57,0	0/0:20,0:20:47.14:0,47,526	0/1:9,0:9:99:110,0,105
chr10	88757573	.	ACTCT	A	777.21	PASS	AB=0.995;AC=27;AF=0.500;AN=54;BaseQRankSum=5.607;DP=570;FS=0.000;HRun=0;HaplotypeScore=148.6090;InbreedingCoeff=0.3914;MQ=68.37;MQ0=13;MQRankSum=5.464;QD=2.45;ReadPosRankSum=4.621;VQSLOD=2.3916;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:22:6:53,6,0	0/0:5,0:5:0.47:0,0,1	0/0:35,0:20:0.89:0,1,2	./.	1/1:12,5:18:6.02:80,6,0	0/1:15,0:13:0:0,0,0	1/1:15,8:23:8.93:138,9,0	0/0:39,0:37:18.98:0,19,284	1/1:9,0:11:6.01:56,6,0	0/0:18,0:17:29.99:0,30,576	0/0:11,0:11:0:0,0,0	1/1:10,0:12:15.02:189,15,0	0/1:24,0:24:3.06:7,0,3	1/1:8,6:14:3.01:47,3,0	0/1:27,0:28:1.49:1,0,11	0/1:27,0:26:19.08:20,0,19	0/0:25,0:26:2.76:0,3,52	1/1:11,2:13:12.03:155,12,0	1/1:19,0:19:4.57:51,5,0	0/1:15,0:15:1.71:2,0,18	0/0:23,0:22:17.09:0,17,279	1/1:7,0:9:3.01:47,3,0	0/1:18,0:18:3.18:3,0,17	0/1:31,0:31:11.05:11,0,11	0/0:5,0:9:2.99:0,3,24	0/0:31,0:31:42.61:0,43,807	1/1:18,0:18:6.74:74,7,0	0/0:12,0:12:21.04:0,21,372
chr10	88757599	.	TC	T	561.39	PASS	AB=0.702;AC=7;AF=0.125;AN=56;BaseQRankSum=7.996;DP=583;FS=4.493;HRun=1;HaplotypeScore=129.2870;InbreedingCoeff=-0.1651;MQ=49.91;MQ0=34;MQRankSum=4.794;QD=3.55;ReadPosRankSum=9.344;VQSLOD=-0.2254;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:22.84:0,23,253	0/0:3,0:3:4.24:0,4,41	0/0:35,1:9:15.41:0,15,157	0/0:61,0:17:30.08:0,30,348	0/0:17,0:17:31.24:0,31,359	0/0:20,0:18:39.11:0,39,477	0/0:24,0:23:23.96:0,24,463	0/0:37,0:34:86.98:0,87,1073	0/0:7,0:7:12.59:0,13,153	0/0:20,0:19:48.16:0,48,691	0/0:9,0:9:8.98:0,9,101	0/0:16,0:16:34.31:0,34,361	0/1:14,13:27:99:152,0,130	0/0:19,0:19:37.34:0,37,443	0/1:17,10:27:33.07:90,0,33	0/1:12,6:18:69.60:77,0,70	0/0:19,0:19:21.06:0,21,257	0/0:12,0:12:27.31:0,27,272	0/0:8,1:9:1.66:0,2,89	0/1:12,5:17:33.89:34,0,101	0/0:26,0:25:39.12:0,39,510	0/0:11,0:11:12.90:0,13,137	0/1:8,7:16:36.78:79,0,37	0/1:13,21:34:91.69:227,0,92	0/0:19,0:19:36.12:0,36,461	0/0:21,0:21:63.19:0,63,869	0/1:11,4:18:32.76:33,0,146	0/0:13,0:11:30.09:0,30,387
chr10	88757664	.	GTC	G	5457.10	PASS	AB=0.591;AC=25;AF=0.446;AN=56;BaseQRankSum=13.531;DP=528;FS=3.358;HRun=0;HaplotypeScore=109.6235;InbreedingCoeff=0.7796;MQ=61.21;MQ0=16;MQRankSum=1.018;QD=26.75;ReadPosRankSum=4.761;VQSLOD=5.5955;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:33.06:410,33,0	0/1:1,6:7:29.77:213,0,30	0/0:44,0:13:16.30:0,16,318	0/0:75,0:33:28.42:0,28,366	0/0:14,0:14:27.06:0,27,382	0/0:23,0:22:45.10:0,45,738	0/0:19,0:19:45.14:0,45,727	0/0:30,0:27:69.19:0,69,1133	1/1:2,9:11:24.06:312,24,0	0/1:2,9:11:20.95:286,0,21	1/1:0,8:8:24.08:312,24,0	0/0:9,0:9:20.96:0,21,300	1/1:1,16:17:48.04:568,48,0	0/0:15,0:15:33.07:0,33,468	1/1:2,21:23:39.06:471,39,0	1/1:2,8:10:27.05:331,27,0	1/1:2,15:17:27.05:327,27,0	0/0:13,0:13:27.09:0,27,445	0/1:7,6:13:99:204,0,143	1/1:7,17:23:53.99:662,54,0	0/0:28,0:28:51.13:0,51,804	0/0:8,0:8:21.07:0,21,345	1/1:4,8:12:33.01:388,33,0	1/1:7,9:16:27.03:332,27,0	0/0:13,0:13:33.10:0,33,523	0/0:16,0:16:42.14:0,42,703	1/1:3,15:18:51.15:643,51,0	0/0:17,0:17:48.12:0,48,701
chr10	88757736	.	CTG	C	30.86	PASS	AB=0.978;AC=10;AF=0.179;AN=56;BaseQRankSum=8.015;DP=393;FS=6.899;HRun=0;HaplotypeScore=116.6729;InbreedingCoeff=0.0629;MQ=50.58;MQ0=20;MQRankSum=-7.867;QD=0.28;ReadPosRankSum=2.366;VQSLOD=1.8935;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:12.87:0,13,139	0/1:7,1:8:3.71:57,0,4	0/1:31,0:8:2.86:3,0,171	0/0:51,0:14:10.63:0,11,241	0/0:16,0:16:27.07:0,27,486	0/0:17,0:16:45.12:0,45,774	0/0:11,0:11:24.03:0,24,454	0/0:31,0:30:81.19:0,81,1300	0/1:6,0:6:23.11:23,0,59	0/1:10,0:10:3.02:3,0,87	0/0:4,0:4:10.95:0,11,56	0/0:7,0:7:18.06:0,18,347	0/1:12,0:12:27.06:27,0,50	0/0:9,0:8:15.02:0,15,221	0/0:14,0:14:12.59:0,13,151	0/1:10,0:10:12.12:12,0,81	0/1:11,0:11:9.26:9,0,82	0/0:13,0:13:33.11:0,33,631	1/1:8,0:3:5.98:21,6,0	0/0:14,2:16:23.72:0,24,220	0/0:11,0:11:24.05:0,24,384	0/0:6,0:6:9.01:0,9,140	0/0:23,0:23:19.64:0,20,152	0/0:10,0:10:4.56:0,5,51	0/0:10,0:10:25.27:0,25,363	0/0:15,0:15:45.13:0,45,793	0/1:13,1:14:4.88:5,0,177	0/0:10,0:10:30.10:0,30,577
chr10	88757746	.	CTG	C	2771.22	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=11.168;DP=354;FS=2.017;HRun=0;HaplotypeScore=110.8223;InbreedingCoeff=0.8954;MQ=55.16;MQ0=12;MQRankSum=-6.907;QD=16.69;ReadPosRankSum=-0.213;VQSLOD=3.6084;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,3:7:10.25:81,10,0	1/1:1,6:7:17.28:228,17,0	0/1:25,0:10:2.86:3,0,238	0/0:45,0:15:24.25:0,24,290	0/0:15,0:15:24.07:0,24,462	0/0:16,0:15:39.05:0,39,677	0/0:11,0:11:24.08:0,24,454	0/0:25,0:23:66.18:0,66,1235	1/1:1,3:4:9.03:129,9,0	1/1:2,7:9:18.06:256,18,0	1/1:0,4:4:11.80:95,12,0	0/0:7,0:7:18.06:0,18,347	1/1:1,10:11:27.02:355,27,0	0/0:8,0:7:8.98:0,9,104	1/1:5,8:13:32.62:295,33,0	1/1:1,8:9:26.89:309,27,0	1/1:3,7:10:24.36:291,24,0	0/0:13,0:13:36.07:0,36,652	1/1:6,3:4:12:148,12,0	1/1:7,7:14:24.11:177,24,0	0/0:7,0:7:15.05:0,15,289	0/0:5,0:5:6.02:0,6,116	1/1:5,18:23:26.62:264,27,0	1/1:2,7:9:11.87:119,12,0	0/0:11,0:10:26.99:0,27,403	0/0:13,0:13:33.10:0,33,598	1/1:2,10:12:25:243,25,0	0/0:10,0:10:30.10:0,30,578
chr10	88757771	.	CAT	C	486.32	PASS	AB=0.882;AC=31;AF=0.705;AN=44;BaseQRankSum=2.750;DP=243;FS=1.820;HRun=0;HaplotypeScore=100.9669;InbreedingCoeff=0.3038;MQ=62.00;MQ0=3;MQRankSum=-0.219;QD=2.88;ReadPosRankSum=2.208;VQSLOD=1.8538;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:3.01:0,3,42	1/1:6,0:6:4.89:25,5,0	1/1:12,0:6:0.10:1,0,0	./.	0/1:14,0:14:0:0,0,0	1/1:10,0:10:11.51:65,12,0	0/0:7,0:7:0.47:0,0,1	0/1:19,0:17:8.10:8,0,76	1/1:2,0:2:2.80:13,3,0	./.	0/0:3,0:3:3:0,3,25	./.	1/1:11,0:11:11.36:56,11,0	./.	1/1:8,0:8:5.68:28,6,0	1/1:6,0:6:2.84:14,3,0	1/1:10,0:10:5.60:26,6,0	1/1:11,0:11:5.82:33,6,0	1/1:8,0:8:5.68:28,6,0	1/1:8,0:8:11.32:55,11,0	./.	./.	1/1:18,0:18:14.03:69,14,0	1/1:6,0:6:5.64:27,6,0	0/1:5,4:10:26.12:147,0,26	0/0:6,0:6:2.94:0,3,18	1/1:9,0:9:2.84:14,3,0	0/0:8,0:6:2.94:0,3,18
chr10	88757779	.	TATATATATATATATATATAC	T	3747.32	PASS	AB=1.000;AC=19;AF=0.380;AN=50;BaseQRankSum=4.856;DP=192;FS=12.498;HRun=0;HaplotypeScore=119.1220;InbreedingCoeff=0.4175;MQ=60.85;MQ0=3;MQRankSum=-2.980;QD=43.57;ReadPosRankSum=2.684;VQSLOD=2.2638;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:3.01:0,3,216	0/0:4,0:4:6.02:0,6,127	0/0:7,0:4:5.06:0,5,21	0/0:18,0:6:2.46:0,2,25	0/0:11,0:11:2.95:0,3,92	0/1:9,0:9:99:132,0,150	0/1:5,0:5:0.29:0,0,60	0/0:16,0:14:27.09:0,27,1484	0/0:2,0:2:2.94:0,3,18	0/0:2,0:2:3.01:0,3,155	0/0:1,0:1:3.01:0,3,126	./.	1/1:4,5:9:15.05:712,15,0	0/0:6,0:5:3.01:0,3,30	1/1:2,3:5:6.02:329,6,0	1/1:3,1:4:3.01:164,3,0	0/0:8,0:8:6.02:0,6,114	0/1:8,0:8:49.71:50,0,206	1/1:4,5:9:14.96:393,15,0	1/1:4,4:8:11.64:656,12,0	./.	./.	1/1:8,7:15:14.92:820,15,0	1/1:2,3:5:6.02:327,6,0	0/0:11,0:10:21.07:0,21,1545	0/0:5,0:5:9.03:0,9,479	1/1:7,2:9:3.01:164,3,0	0/0:5,0:3:6.02:0,6,288
chr10	88757783	.	TATATATATATATATAC	T	2871.48	PASS	AB=0.844;AC=24;AF=0.462;AN=52;BaseQRankSum=4.802;DP=184;FS=12.644;HRun=0;HaplotypeScore=107.4714;InbreedingCoeff=0.4486;MQ=58.63;MQ0=3;MQRankSum=-2.957;QD=31.91;ReadPosRankSum=2.611;VQSLOD=1.8268;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:3.01:0,3,183	0/0:4,0:4:4.48:0,4,22	0/0:7,0:4:3.78:0,4,11	0/0:16,0:4:0:0,0,0	0/0:10,2:12:2.59:0,3,24	0/1:6,2:8:44.54:332,0,45	1/1:5,0:5:5.99:56,6,0	0/0:16,0:14:30.10:0,30,1301	1/1:2,0:2:3.01:35,3,0	0/0:2,0:2:3.01:0,3,109	0/0:1,0:1:3.01:0,3,71	./.	1/1:8,0:8:14.97:474,15,0	1/1:6,1:6:2.60:10,3,0	1/1:5,0:5:6.02:228,6,0	1/1:3,0:3:3.01:114,3,0	0/0:11,0:11:6.12:0,6,75	0/1:7,1:8:45.40:127,0,45	1/1:9,0:9:14.96:294,15,0	1/1:7,0:7:11.77:456,12,0	0/0:1,0:1:3.01:0,3,49	./.	1/1:15,0:15:14.92:570,15,0	1/1:4,0:4:6.02:227,6,0	0/0:9,0:9:21.07:0,21,1182	0/0:4,0:4:9.03:0,9,367	1/1:9,0:9:3.01:114,3,0	0/0:4,0:3:6.02:0,6,211
chr10	88757785	.	TATATATATATATAC	T	2832.14	PASS	AB=1.000;AC=31;AF=0.596;AN=52;BaseQRankSum=4.566;DP=178;FS=13.185;HRun=0;HaplotypeScore=99.8028;InbreedingCoeff=0.5059;MQ=58.73;MQ0=3;MQRankSum=-4.340;QD=24.41;ReadPosRankSum=2.194;VQSLOD=1.4684;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:3.01:0,3,168	1/1:4,0:4:5.14:31,5,0	0/0:6,0:4:3.47:0,3,10	0/0:16,0:4:0:0,0,0	1/1:8,4:12:2.99:38,3,0	1/1:7,2:9:14.76:359,15,0	1/1:5,0:5:5.95:99,6,0	0/0:15,0:13:30.10:0,30,1080	1/1:2,0:2:3.01:61,3,0	0/0:2,0:2:3.01:0,3,88	0/0:1,0:1:3.01:0,3,45	./.	1/1:7,0:7:14.97:418,15,0	1/1:4,3:6:3.01:56,3,0	1/1:5,0:5:6.02:200,6,0	1/1:3,0:3:3.01:100,3,0	0/1:10,0:10:32.96:35,0,33	1/1:9,0:9:6.02:134,6,0	1/1:9,0:9:14.96:266,15,0	1/1:7,0:7:11.77:400,12,0	0/0:1,0:1:2.99:0,3,24	./.	1/1:14,0:14:14.92:500,15,0	1/1:4,0:4:6.02:199,6,0	0/0:8,0:8:21.07:0,21,1001	0/0:4,0:4:9.03:0,9,314	1/1:9,0:9:3.01:100,3,0	0/0:3,0:2:6.02:0,6,148
chr10	88757880	.	CA	C	1931.30	PASS	AB=0.888;AC=47;AF=0.839;AN=56;BaseQRankSum=3.352;DP=339;FS=1.553;HRun=15;HaplotypeScore=63.7407;InbreedingCoeff=0.4682;MQ=75.81;MQ0=0;MQRankSum=0.425;QD=6.50;ReadPosRankSum=4.127;VQSLOD=2.7341;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:3:4.06:12,4,0	0/1:2,1:3:13.28:13,0,17	0/1:19,1:17:14.28:14,0,69	0/1:7,0:6:5.38:5,0,28	1/1:3,14:20:35.48:210,35,0	1/1:2,11:13:0.22:127,0,0	1/1:1,4:5:2.91:19,3,0	1/1:8,14:22:12.02:204,12,0	1/1:0,0:3:6.11:17,6,0	0/0:14,0:15:29.83:0,30,250	0/0:8,2:10:4.65:0,5,153	1/1:0,4:5:13.86:83,14,0	1/1:2,0:9:10.13:29,10,0	1/1:2,5:7:14.73:96,15,0	1/1:1,0:9:16.29:47,16,0	1/1:1,1:7:12.21:35,12,0	0/0:17,0:17:35.78:0,36,285	1/1:4,8:12:20.62:134,21,0	1/1:5,0:15:18.25:53,18,0	1/1:8,2:23:34.34:121,34,0	1/1:2,6:8:13.84:83,14,0	1/1:2,6:8:14.70:94,15,0	1/1:4,0:21:24.42:70,24,0	1/1:1,0:8:14.04:41,14,0	1/1:4,7:13:18.78:108,19,0	1/1:4,10:14:26.51:173,27,0	1/1:2,1:25:35.23:113,35,0	1/1:3,11:16:30.62:185,31,0
chr10	88757974	.	AT	A	4097.17	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=13.843;DP=400;FS=0.959;HRun=6;HaplotypeScore=119.8114;InbreedingCoeff=0.9821;MQ=83.23;MQ0=0;MQRankSum=-13.510;QD=23.96;ReadPosRankSum=1.057;VQSLOD=2.3037;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,12:13:34.18:326,34,0	1/1:0,2:2:5.93:49,6,0	0/0:16,0:16:26.73:0,27,417	0/0:16,0:17:27.70:0,28,364	0/0:13,0:13:36.12:0,36,474	0/0:21,0:21:60.20:0,60,788	0/0:12,0:12:30.08:0,30,380	0/0:29,0:29:81.26:0,81,1054	1/1:1,10:11:32.89:311,33,0	1/1:2,11:13:33.08:354,33,0	1/1:1,7:8:17.96:177,18,0	0/0:11,0:11:30.10:0,30,395	1/1:0,13:13:32.40:286,32,0	0/0:22,0:22:66.20:0,66,852	1/1:2,8:9:27.07:289,27,0	1/1:0,10:9:25.21:234,25,0	1/1:1,9:10:22.14:188,22,0	0/0:10,0:10:27.07:0,27,339	1/1:1,17:18:51.09:534,51,0	1/1:3,14:17:40.63:348,41,0	0/0:21,0:21:63.20:0,63,829	0/0:9,0:9:27.09:0,27,355	1/1:0,15:15:32.40:287,32,0	1/1:2,9:11:20.96:196,21,0	0/0:16,0:16:45.15:0,45,592	0/0:16,0:16:48.14:0,48,608	1/1:3,17:20:51:518,51,0	0/0:16,0:16:48.14:0,48,607
chr10	88757984	.	A	ATCTATGTTTAT	27891.65	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=15.354;DP=463;FS=1.328;HRun=0;HaplotypeScore=181.6369;InbreedingCoeff=0.9942;MQ=72.82;MQ0=1;MQRankSum=-16.467;QD=130.95;ReadPosRankSum=-0.420;VQSLOD=5.0865;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,10:18:42.12:2153,42,0	1/1:3,1:4:12.04:561,12,0	0/0:20,0:18:47.72:0,48,1441	0/0:15,0:15:40.26:0,40,891	0/0:14,0:14:36.12:0,36,1259	0/0:24,0:24:63.20:0,63,2098	0/0:15,0:15:42.14:0,42,1347	0/0:30,0:30:87.30:0,87,2859	1/1:8,6:14:39.13:2071,39,0	1/1:9,7:16:45.15:2311,45,0	1/1:2,6:8:18.06:1033,18,0	0/0:14,0:14:42.14:0,42,1388	1/1:7,8:15:45.15:2422,45,0	0/0:21,0:21:63.22:0,63,2214	1/1:6,8:13:39.13:2020,39,0	1/1:9,6:14:36.12:1823,36,0	1/1:8,5:13:33.11:1871,33,0	0/0:12,0:12:33.09:0,33,1025	1/1:15,5:20:60.17:2514,60,0	1/1:15,6:22:54.19:2270,54,0	0/0:25,0:25:72.25:0,72,2471	0/0:8,0:8:24.08:0,24,845	1/1:12,8:20:54.18:2410,54,0	1/1:9,4:13:33.10:1641,33,0	0/0:15,0:15:45.15:0,45,1605	0/0:18,0:18:54.17:0,54,1697	1/1:9,12:20:54.19:2789,54,0	0/0:18,0:18:51.15:0,51,1659
chr10	88758010	.	A	ATG	4490.74	PASS	AB=0.609;AC=19;AF=0.339;AN=56;BaseQRankSum=4.739;DP=544;FS=3.428;HRun=0;HaplotypeScore=142.3910;InbreedingCoeff=0.8845;MQ=64.62;MQ0=5;MQRankSum=-7.377;QD=26.42;ReadPosRankSum=1.281;VQSLOD=5.9235;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,16:24:2.52:546,3,0	0/0:7,0:7:18.06:0,18,220	0/0:35,0:24:33.01:0,33,355	0/0:33,0:29:44.08:0,44,620	0/0:15,0:16:44.93:0,45,491	0/0:23,0:23:54.17:0,54,659	0/0:23,0:24:53.93:0,54,598	0/0:33,0:33:50.13:0,50,658	1/1:2,11:12:30.10:486,30,0	0/0:21,0:21:42.13:0,42,511	0/0:11,0:11:15.03:0,15,171	0/0:19,0:19:51.14:0,51,609	1/1:2,9:11:24.08:382,24,0	0/0:20,0:21:44.96:0,45,513	1/1:3,14:15:33.11:533,33,0	0/1:5,9:14:79.85:308,0,80	0/0:17,0:17:30.06:0,30,348	0/0:12,0:12:30.09:0,30,365	1/1:10,4:14:21.06:316,21,0	1/1:8,14:22:33.11:531,33,0	0/0:35,0:35:93.27:0,93,1120	0/0:12,0:12:30.08:0,30,354	1/1:6,10:16:21.07:339,21,0	1/1:6,12:18:21.07:337,21,0	0/0:15,0:15:42.11:0,42,490	0/0:23,0:23:57.17:0,57,686	1/1:8,12:19:48.06:712,48,0	0/0:17,0:17:45.14:0,45,549
chr10	88758653	.	ACT	A	9429.60	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.831;DP=613;FS=3.119;HRun=0;HaplotypeScore=100.1761;InbreedingCoeff=0.9998;MQ=87.40;MQ0=0;MQRankSum=-1.192;QD=39.29;ReadPosRankSum=4.889;VQSLOD=6.9994;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:33.11:486,33,0	0/0:12,0:12:36.12:0,36,673	0/0:17,0:17:48.16:0,48,889	0/0:26,0:25:60.17:0,60,994	0/0:29,0:29:81.26:0,81,1473	0/0:22,0:22:66.23:0,66,1236	0/0:22,0:22:63.22:0,63,1179	0/0:31,0:31:87.29:0,87,1602	1/1:0,26:26:69.23:1016,69,0	0/0:32,0:32:96.33:0,96,1783	0/0:19,0:19:54.17:0,54,978	0/0:19,0:19:57.20:0,57,1053	1/1:1,20:21:45.15:663,45,0	0/0:18,0:18:54.19:0,54,1011	1/1:0,20:20:54.18:795,54,0	1/1:0,24:24:69.23:1016,69,0	0/0:25,0:25:66.23:0,66,1227	0/0:17,0:17:48.14:0,48,865	1/1:0,26:26:78.25:1124,78,0	1/1:1,32:33:87.29:1281,87,0	0/0:24,0:24:69.22:0,69,1258	0/0:18,0:18:48.16:0,48,891	1/1:1,28:29:71.75:1060,72,0	1/1:1,18:19:51.17:751,51,0	0/0:13,0:13:39.13:0,39,731	0/0:20,0:20:57.20:0,57,1068	1/1:0,30:30:84.28:1237,84,0	0/0:9,0:9:27.09:0,27,506
chr10	88759621	.	TC	T	3445.22	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-12.381;DP=861;FS=26.838;HRun=2;HaplotypeScore=205.4225;InbreedingCoeff=0.9984;MQ=59.91;MQ0=2;MQRankSum=-0.208;QD=29.45;ReadPosRankSum=-0.056;VQSLOD=0.2217;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:88.18:0,88,545	0/0:12,0:12:23.27:0,23,156	0/0:13,0:12:26.12:0,26,253	0/0:21,0:17:33.07:0,33,287	0/0:29,0:29:66.64:0,67,412	0/0:39,0:39:79.96:0,80,462	0/0:46,0:46:99:0,100,464	1/1:1,34:35:99:1109,102,0	0/0:38,0:38:57.46:0,57,304	0/0:40,0:39:72.69:0,73,810	0/0:24,0:24:47.30:0,47,310	0/0:43,0:43:71.27:0,71,357	0/0:38,0:37:80.67:0,81,401	0/0:37,0:37:70.49:0,70,386	0/0:35,0:35:53.52:0,54,304	0/0:32,0:32:39.21:0,39,224	0/0:27,0:27:62.61:0,63,324	0/0:14,0:14:25.06:0,25,123	0/0:16,0:14:38.16:0,38,277	0/0:29,0:29:74.25:0,74,373	1/1:2,33:35:82.08:916,82,0	0/0:34,0:34:92.40:0,92,529	0/0:33,0:33:80.95:0,81,411	0/0:29,0:28:56.81:0,57,277	0/0:30,0:30:67.31:0,67,441	1/1:4,26:30:49.72:851,50,0	0/0:47,0:47:91.14:0,91,461	1/1:0,17:17:51.14:570,51,0
chr10	88760021	.	CCAG	C	9742.65	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=16.301;DP=626;FS=23.202;HRun=0;HaplotypeScore=98.9921;InbreedingCoeff=0.9904;MQ=66.55;MQ0=0;MQRankSum=-2.951;QD=35.30;ReadPosRankSum=7.634;VQSLOD=3.4555;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:31:43.22:973,43,0	1/1:0,8:8:18.05:300,18,0	0/0:19,0:18:48.10:0,48,857	0/0:14,0:14:36.12:0,36,719	0/0:33,0:33:78.23:0,78,1640	0/0:19,0:19:54.17:0,54,1151	0/0:35,0:35:99:0,102,2210	0/0:31,0:31:87.30:0,87,1856	1/1:1,16:17:42.14:699,42,0	1/1:1,12:12:27.09:438,27,0	1/1:2,7:9:8.99:150,9,0	0/0:28,0:28:81.28:0,81,1807	1/1:1,17:18:45.15:742,45,0	0/0:35,0:35:96.31:0,96,2045	1/1:2,19:21:48.16:799,48,0	1/1:1,22:23:54.18:899,54,0	1/1:0,28:28:60.21:999,60,0	0/0:16,0:16:39.13:0,39,884	1/1:2,11:13:27.09:425,27,0	1/1:3,22:25:42.14:670,42,0	0/0:22,0:22:51.14:0,51,1069	0/0:14,0:14:33.11:0,33,697	1/1:1,20:20:27.09:450,27,0	1/1:2,31:33:84.29:1399,84,0	0/0:32,0:32:87.26:0,87,1834	0/0:36,0:36:64.49:0,64,2302	1/1:0,16:16:48.16:799,48,0	0/0:16,0:16:42.14:0,42,922
chr10	88760177	.	T	TATCA	15377.59	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=10.338;DP=612;FS=4.925;HRun=0;HaplotypeScore=108.7167;InbreedingCoeff=0.9998;MQ=77.61;MQ0=1;MQRankSum=-8.633;QD=75.01;ReadPosRankSum=3.337;VQSLOD=7.0162;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,12:14:36.12:1042,36,0	0/0:10,0:10:30.09:0,30,574	0/0:28,0:28:75.25:0,75,1465	0/0:27,0:27:69.16:0,69,1246	0/0:23,0:23:66.21:0,66,1341	0/0:25,0:25:75.26:0,75,1573	0/0:18,0:18:54.19:0,54,1133	0/0:35,0:35:99:0,99,1976	1/1:2,21:25:63.22:1820,63,0	0/0:28,0:28:84.29:0,84,1739	0/0:18,0:18:51.18:0,51,1068	0/0:23,0:23:66.23:0,66,1383	1/1:2,19:22:60.21:1721,60,0	0/0:26,0:26:78.24:0,78,1559	1/1:1,22:24:69.24:1958,69,0	1/1:2,17:21:54.19:1559,54,0	0/0:24,0:24:72.25:0,72,1509	0/0:22,0:22:63.22:0,63,1321	1/1:1,10:12:36.12:966,36,0	1/1:4,16:20:54.17:1462,54,0	0/0:29,0:29:84.29:0,84,1744	0/0:17,0:17:51.17:0,51,1047	1/1:2,9:14:33.11:951,33,0	1/1:2,14:17:36.12:1042,36,0	0/0:14,0:14:42.14:0,42,881	0/0:22,0:22:66.23:0,66,1364	1/1:6,28:35:99:2856,99,0	0/0:18,0:18:54.18:0,54,1058
chr10	88763359	.	TGGG	T	9292.78	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-2.354;DP=734;FS=2.249;HRun=3;HaplotypeScore=136.7933;InbreedingCoeff=0.9977;MQ=69.30;MQ0=0;MQRankSum=-2.661;QD=49.17;ReadPosRankSum=3.437;VQSLOD=4.8317;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,3152	0/0:12,0:12:33.11:0,33,786	0/0:7,0:7:21.07:0,21,499	0/0:16,0:16:48.16:0,48,1114	1/1:0,19:19:45.15:839,45,0	1/1:0,11:11:30.10:558,30,0	1/1:0,34:34:93.32:1713,93,0	0/0:29,0:29:84.29:0,84,2075	0/0:36,0:36:99:0,108,2658	0/0:32,0:32:93.31:0,93,2225	0/0:16,0:16:48.16:0,48,1178	1/1:0,45:45:99:2230,120,0	0/0:29,0:29:87.28:0,87,2092	1/1:0,29:29:81.28:1510,81,0	0/0:37,0:37:99:0,111,2718	0/0:23,0:23:69.24:0,69,1656	0/0:32,0:32:96.30:0,96,2315	1/1:0,26:26:75.26:1381,75,0	0/0:25,0:25:72.25:0,72,1766	0/0:30,0:30:90.30:0,90,2172	0/0:54,0:54:99:0,163,3990	1/1:0,25:25:57.20:1062,57,0	0/0:15,0:15:45.15:0,45,1107	0/0:29,0:29:87.30:0,87,2123	0/0:25,0:25:75.26:0,75,1847	0/0:29,0:29:87.29:0,87,2096	0/0:19,0:19:54.19:0,54,1319	0/0:6,0:6:18.06:0,18,444
chr10	88763942	.	TTCTCTCTCTCTC	T	1127.64	PASS	AB=1.000;AC=11;AF=0.212;AN=52;BaseQRankSum=2.865;DP=633;FS=1.300;HRun=0;HaplotypeScore=186.9552;InbreedingCoeff=0.6207;MQ=69.25;MQ0=26;MQRankSum=-3.023;QD=8.81;ReadPosRankSum=1.397;VQSLOD=2.5778;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,5:22:3.01:103,3,0	0/0:7,0:9:9.01:0,9,103	0/0:54,0:25:0.47:0,0,1	./.	0/0:21,0:22:9.03:0,9,375	0/0:26,0:27:18.04:0,18,743	0/0:16,0:16:12.04:0,12,643	1/1:26,0:26:3.01:41,3,0	1/1:18,9:27:18.06:616,18,0	0/0:27,0:28:21.20:0,21,462	0/0:12,0:13:6.02:0,6,115	0/0:12,0:15:12.04:0,12,464	0/0:17,0:21:16.39:0,16,590	0/0:19,0:20:12.04:0,12,448	0/0:16,0:20:9.03:0,9,155	0/0:13,0:14:15.05:0,15,649	0/0:17,0:19:12.04:0,12,229	0/0:17,0:20:24.08:0,24,759	0/0:7,0:11:15.05:0,15,446	0/0:26,0:28:18.01:0,18,410	0/1:20,0:20:36.45:59,0,36	0/0:18,0:18:15.04:0,15,532	./.	0/0:22,0:23:42.11:0,42,1993	0/0:23,0:23:5.85:0,6,255	1/1:19,3:22:9.02:270,9,0	0/0:16,0:22:27.07:0,27,584	1/1:9,1:10:5.16:185,5,0
chr10	88768016	.	AT	A	9653.97	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=11.332;DP=674;FS=9.529;HRun=1;HaplotypeScore=83.1279;InbreedingCoeff=0.9977;MQ=89.01;MQ0=0;MQRankSum=-2.350;QD=37.27;ReadPosRankSum=1.863;VQSLOD=5.0123;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,50:51:99:1761,126,0	0/0:11,0:11:33.11:0,33,524	0/0:32,0:32:73.34:0,73,1299	0/0:17,0:17:51.17:0,51,814	0/0:25,0:25:75.24:0,75,1174	0/0:17,0:17:48.16:0,48,767	0/0:31,0:31:93.30:0,93,1451	0/0:23,0:23:66.22:0,66,1035	1/1:0,26:26:75.25:1049,75,0	0/0:24,0:24:72.24:0,72,1131	0/0:17,0:17:51.16:0,51,789	0/0:18,0:18:54.18:0,54,862	1/1:0,22:22:60.20:834,60,0	0/0:28,0:28:84.29:0,84,1342	1/1:0,17:17:51.17:713,51,0	1/1:0,20:20:57.19:797,57,0	0/0:34,0:34:99:0,99,1554	0/0:20,0:20:60.16:0,60,909	1/1:0,19:19:57.19:795,57,0	1/1:0,29:29:84.28:1174,84,0	0/0:32,0:32:93.28:0,93,1439	0/0:23,0:23:66.23:0,66,1055	1/1:0,18:18:41.93:587,42,0	1/1:0,36:36:90.29:1233,90,0	0/0:22,0:22:66.23:0,66,1055	0/0:19,1:20:15.33:0,15,801	1/1:0,21:21:51.17:711,51,0	0/0:21,0:21:63.21:0,63,1007
chr10	88768265	.	A	ACCATGGG	22545.38	PASS	AB=0.971;AC=21;AF=0.375;AN=56;BaseQRankSum=5.477;DP=679;FS=9.208;HRun=0;HaplotypeScore=163.2512;InbreedingCoeff=0.9237;MQ=86.51;MQ0=0;MQRankSum=-18.604;QD=83.50;ReadPosRankSum=0.195;VQSLOD=5.4189;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,19:25:72.20:2769,72,0	0/0:10,0:10:30.10:0,30,807	0/0:33,0:33:83.92:0,84,2241	0/0:24,0:24:66.20:0,66,1636	0/0:28,0:28:84.29:0,84,2200	0/0:16,0:16:48.15:0,48,1170	0/0:26,0:26:78.27:0,78,2038	0/0:27,0:27:75.25:0,75,1906	1/1:5,15:21:60.21:2419,60,0	0/0:41,0:41:99:0,120,3043	0/0:17,0:17:51.16:0,51,1289	0/0:27,0:27:81.28:0,81,2122	1/1:6,10:20:42.14:1689,42,0	0/0:19,0:19:54.19:0,54,1364	1/1:6,21:28:81.28:3199,81,0	1/1:7,19:28:72.25:2903,72,0	0/0:23,0:23:63.22:0,63,1667	0/0:12,0:12:36.12:0,36,876	1/1:10,4:19:51.08:1483,51,0	1/1:8,15:26:63.21:2367,63,0	0/0:42,0:41:99:0,123,3247	0/0:32,0:32:93.32:0,93,2493	1/1:7,13:23:47.87:1928,48,0	1/1:4,12:21:30.10:1212,30,0	0/0:16,0:16:45.15:0,45,1213	0/1:32,1:33:32.34:32,0,2223	1/1:5,17:26:69.19:2544,69,0	0/0:16,0:16:48.16:0,48,1263
chr10	88769008	.	ACACACAC	A	3135.04	PASS	AB=0.937;AC=22;AF=0.393;AN=56;BaseQRankSum=-2.248;DP=774;FS=16.516;HRun=0;HaplotypeScore=181.8373;InbreedingCoeff=0.2909;MQ=44.66;MQ0=72;MQRankSum=-3.770;QD=7.90;ReadPosRankSum=-3.968;VQSLOD=0.7838;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:36:35.88:0,36,313	1/1:6,8:10:6.49:150,6,0	0/0:42,0:11:23.06:0,23,392	0/0:72,0:13:16.65:0,17,407	0/1:21,0:19:7.73:8,0,154	0/0:24,0:22:17.60:0,18,213	0/1:34,0:33:13.52:14,0,143	1/1:26,1:26:44.94:484,45,0	0/1:15,1:16:58.81:59,0,144	1/1:7,16:18:48.16:994,48,0	0/1:3,8:11:48.47:85,0,48	0/0:19,0:18:29.46:0,29,229	0/1:16,2:17:72.50:120,0,73	0/0:28,0:24:12.98:0,13,171	0/0:20,0:18:20.91:0,21,160	0/1:20,1:20:54.27:54,0,191	1/1:6,19:24:6.44:94,6,0	0/1:27,0:26:55.55:56,0,127	0/1:21,0:16:2.37:263,0,2	0/0:36,0:34:37.17:0,37,297	1/1:63,0:53:32:279,32,0	0/0:23,0:22:11.54:0,12,169	0/1:26,0:23:3.03:3,0,136	0/0:34,0:31:11.23:0,11,246	0/0:19,0:17:51.13:0,51,1716	1/1:28,3:25:55.74:576,56,0	0/0:17,0:14:4.50:0,5,105	0/1:19,0:18:0.92:83,0,1
chr10	88769010	.	ACACAC	A	5806.36	PASS	AB=0.988;AC=48;AF=0.857;AN=56;BaseQRankSum=6.296;DP=769;FS=0.665;HRun=0;HaplotypeScore=158.7939;InbreedingCoeff=0.6070;MQ=44.35;MQ0=77;MQRankSum=2.342;QD=9.17;ReadPosRankSum=4.230;VQSLOD=3.2117;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:41,1:36:16.97:20,0,17	1/1:14,0:10:6.49:80,6,0	0/0:45,0:11:22.87:0,23,356	0/0:72,0:13:18.46:0,18,410	1/1:21,1:20:15.97:112,16,0	1/1:24,1:23:15.47:95,15,0	1/1:29,4:32:18.89:213,19,0	1/1:8,17:24:60.11:786,60,0	1/1:15,1:16:16.56:130,17,0	1/1:22,0:17:48.11:562,48,0	0/1:13,0:11:44.19:44,0,50	1/1:21,0:19:12.46:34,12,0	1/1:18,0:17:15.40:101,15,0	1/1:26,2:23:12.54:88,13,0	1/1:19,0:17:8.72:23,9,0	1/1:20,1:20:17.71:133,18,0	1/1:25,0:24:5.85:49,6,0	1/1:23,4:26:14.02:353,14,0	1/1:20,0:16:40.87:426,41,0	1/1:34,2:34:17.14:45,17,0	1/1:17,44:51:33.11:606,33,0	1/1:22,2:22:12.98:89,13,0	1/1:22,3:22:14.04:146,14,0	1/1:32,2:31:20.87:164,21,0	0/0:19,0:17:51.13:0,51,1403	1/1:11,19:24:57.19:983,57,0	1/1:15,1:13:11.92:90,12,0	1/1:4,12:15:21.89:437,22,0
chr10	88769012	.	ACAC	A	10678.44	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=2.592;DP=771;FS=1.358;HRun=0;HaplotypeScore=128.5423;InbreedingCoeff=0.7718;MQ=44.38;MQ0=77;MQRankSum=2.619;QD=16.90;ReadPosRankSum=4.637;VQSLOD=4.5384;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,30:36:27.96:542,28,0	1/1:14,0:10:6:52,6,0	0/0:45,0:12:25.73:0,26,322	0/0:72,0:13:19.16:0,19,377	1/1:5,17:20:30.09:465,30,0	1/1:4,22:24:33.10:527,33,0	1/1:7,27:33:33.09:484,33,0	1/1:23,1:23:60.06:674,60,0	1/1:2,14:16:30.09:454,30,0	1/1:22,0:17:47.88:438,48,0	0/1:13,0:11:45.44:66,0,45	1/1:3,18:19:30.57:501,31,0	1/1:5,13:17:23.96:341,24,0	1/1:9,19:23:24.47:423,24,0	1/1:3,16:17:21.02:349,21,0	1/1:4,17:20:36.11:550,36,0	1/1:25,0:24:5.51:32,6,0	1/1:8,19:26:39.90:571,40,0	1/1:3,18:17:45.14:605,45,0	1/1:9,26:33:40.07:651,40,0	1/1:60,0:50:32.96:307,33,0	1/1:5,19:22:27.08:427,27,0	1/1:9,16:22:26.35:415,26,0	1/1:6,27:30:41.63:654,42,0	0/0:20,0:18:54.14:0,54,1114	1/1:30,0:24:57.06:580,57,0	1/1:5,11:13:21.06:327,21,0	1/1:15,1:15:23.91:242,24,0
chr10	88769014	.	AC	A	5125.37	PASS	AB=0.986;AC=50;AF=0.893;AN=56;BaseQRankSum=7.281;DP=763;FS=1.357;HRun=2;HaplotypeScore=134.0876;InbreedingCoeff=0.6216;MQ=44.61;MQ0=76;MQRankSum=2.236;QD=7.36;ReadPosRankSum=5.019;VQSLOD=2.3323;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:38,4:36:34.94:211,35,0	1/1:12,2:10:5.49:24,5,0	0/0:45,0:11:25.49:0,25,300	0/1:69,2:13:5.36:5,0,344	1/1:21,1:20:29.06:167,29,0	1/1:25,1:24:31.87:170,32,0	1/1:32,0:31:31.90:178,32,0	1/1:21,3:23:60.04:684,60,0	1/1:16,0:16:29.08:173,29,0	1/1:21,1:17:46.24:392,46,0	0/1:13,0:11:24.01:24,0,36	1/1:20,1:19:29.01:157,29,0	1/1:17,1:17:22.61:118,23,0	1/1:26,2:23:29.07:177,29,0	1/1:18,1:17:20.27:109,20,0	1/1:21,0:20:34.51:179,35,0	1/1:23,2:24:6.23:51,6,0	1/1:23,3:25:43.55:273,44,0	1/1:20,1:17:44.62:459,45,0	1/1:30,4:32:37.76:206,38,0	1/1:58,1:49:31.62:199,32,0	1/1:22,2:22:26.06:139,26,0	1/1:23,1:21:25.71:151,26,0	1/1:33,0:30:40.14:215,40,0	0/0:22,0:20:60.15:0,60,839	1/1:28,1:23:55.16:444,55,0	1/1:15,1:13:20.28:108,20,0	1/1:15,1:15:22.79:111,23,0
chr10	88769015	.	C	CA	2600.51	PASS	AB=0.918;AC=47;AF=0.839;AN=56;BaseQRankSum=4.344;DP=760;FS=3.732;HRun=1;HaplotypeScore=143.3932;InbreedingCoeff=0.4679;MQ=44.67;MQ0=76;MQRankSum=4.202;QD=3.82;ReadPosRankSum=3.045;VQSLOD=0.6794;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:41,2:37:12.03:24,12,0	0/0:12,2:10:1.48:0,1,4	0/0:44,0:11:25.54:0,26,294	0/1:70,0:12:5.36:5,0,339	1/1:19,3:20:9.63:61,10,0	1/1:24,2:24:8.39:17,8,0	1/1:31,1:31:9.74:38,10,0	1/1:23,1:23:60.17:750,60,0	1/1:16,0:16:12.59:60,13,0	1/1:19,3:17:35.43:427,35,0	0/1:10,2:11:21.08:21,0,33	1/1:19,2:19:8.58:17,9,0	1/1:17,1:17:13:84,13,0	1/1:23,5:23:9.63:52,10,0	1/1:18,1:17:5.89:11,6,0	1/1:20,1:20:10.48:23,10,0	1/1:21,2:22:2.50:23,2,0	1/1:28,0:27:14.94:80,15,0	1/1:21,0:17:40.89:484,41,0	1/1:33,1:32:11.99:24,12,0	1/1:50,8:48:5.46:121,5,0	1/1:24,0:22:6.62:13,7,0	1/1:21,3:21:7.89:28,8,0	1/1:29,3:29:9.91:20,10,0	0/0:22,0:20:60.15:0,60,793	1/1:25,4:23:29.98:341,30,0	1/1:13,3:13:6.93:19,7,0	0/1:15,1:15:1.23:1,0,1
chr10	88770206	.	G	GAGAA	11845.90	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-14.031;DP=738;FS=0.329;HRun=0;HaplotypeScore=116.8370;InbreedingCoeff=0.9992;MQ=73.08;MQ0=5;MQRankSum=-4.075;QD=59.23;ReadPosRankSum=2.075;VQSLOD=6.6858;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,2234	0/0:7,0:7:21.07:0,21,377	0/0:28,0:24:50.91:0,51,751	0/0:34,0:23:40.68:0,41,679	0/0:40,0:40:99:0,114,1986	0/0:35,0:35:93.30:0,93,1631	0/0:20,0:20:54.18:0,54,957	0/0:32,0:32:72.25:0,72,1278	0/0:14,0:14:39.13:0,39,701	0/0:38,0:38:99:0,111,1944	0/0:17,0:17:48.13:0,48,804	0/0:24,0:24:66.23:0,66,1174	1/1:2,15:17:39.13:1001,39,0	0/0:20,0:20:57.19:0,57,1019	1/1:6,26:32:72.25:1869,72,0	1/1:3,20:23:63.22:1624,63,0	0/0:28,0:28:78.27:0,78,1371	0/0:24,0:23:69.19:0,69,1206	1/1:7,15:25:60.16:1311,60,0	1/1:1,26:28:78.09:1752,78,0	0/0:32,0:32:75.26:0,75,1316	0/0:29,0:29:78.27:0,78,1391	1/1:2,13:17:42.10:1032,42,0	1/1:2,23:26:57.67:1472,58,0	0/0:21,0:21:60.21:0,60,1049	0/0:39,0:39:99:0,108,1921	1/1:3,28:32:69.24:1784,69,0	0/0:11,0:11:30.10:0,30,539
chr10	88770702	.	C	CAGCAGG	3910.40	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-2.096;DP=654;FS=13.823;HRun=0;HaplotypeScore=143.3116;InbreedingCoeff=0.9807;MQ=76.85;MQ0=0;MQRankSum=-7.645;QD=34.00;ReadPosRankSum=-5.902;VQSLOD=1.1043;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:96.26:0,96,1927	0/0:12,0:12:23.83:0,24,386	0/0:13,0:13:20.15:0,20,408	0/0:22,0:22:34.32:0,34,694	0/0:10,0:10:15.04:0,15,290	0/0:11,0:11:27.09:0,27,595	0/0:33,0:33:81.25:0,81,1698	1/1:8,19:28:71.84:1204,72,0	0/0:31,0:31:72.19:0,72,1404	0/0:20,0:20:54.12:0,54,956	0/0:8,0:8:18.03:0,18,314	0/0:27,0:27:63.17:0,63,1248	0/0:29,0:29:78.25:0,78,1673	0/0:49,0:49:99:0,123,2562	0/0:21,0:21:51.14:0,51,1035	0/0:24,0:24:57.17:0,57,1175	0/0:29,0:29:72.23:0,72,1504	0/0:25,0:25:66.16:0,66,1301	0/0:14,0:14:35.60:0,36,697	0/0:17,0:17:28.32:0,28,560	1/1:23,33:61:36.02:895,36,0	0/0:15,0:15:27.06:0,27,497	0/0:11,0:11:21.05:0,21,420	0/0:35,0:35:99:0,99,2038	0/0:20,0:20:48.11:0,48,930	1/1:9,10:20:54.16:1403,54,0	0/0:25,0:25:63.19:0,63,1307	1/1:1,5:6:12.04:408,12,0
chr10	88771867	.	GACA	G	12383.81	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=20.510;DP=744;FS=8.981;HRun=0;HaplotypeScore=144.5794;InbreedingCoeff=0.9932;MQ=87.04;MQ0=0;MQRankSum=-7.657;QD=47.45;ReadPosRankSum=4.249;VQSLOD=6.9352;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,2711	0/0:12,0:12:36.12:0,36,887	0/0:27,0:27:81.26:0,81,1749	0/0:36,0:36:95.97:0,96,2208	1/1:0,29:29:81.28:1411,81,0	1/1:4,14:18:48.13:789,48,0	1/1:0,17:17:48.16:846,48,0	1/1:0,22:22:63.19:1054,63,0	0/0:35,0:35:99:0,105,2555	0/0:34,0:34:99:0,102,2432	0/0:15,0:15:42.14:0,42,1035	1/1:2,22:24:69.22:1188,69,0	0/0:29,0:29:87.30:0,87,2144	1/1:0,29:29:87.30:1533,87,0	0/0:45,0:45:99:0,135,3252	0/0:32,0:32:96.33:0,96,2310	0/0:37,0:37:99:0,111,2652	1/1:0,21:21:57.20:1005,57,0	0/0:19,0:19:57.19:0,57,1332	0/0:18,0:18:54.17:0,54,1282	1/1:1,32:33:75.26:1307,75,0	1/1:0,32:32:87.30:1534,87,0	0/0:17,0:17:51.17:0,51,1189	0/0:32,0:32:96.33:0,96,2340	0/0:29,0:29:84.29:0,84,2071	1/1:2,26:28:10.26:1294,10,0	0/0:27,0:27:81.26:0,81,1943	1/1:0,8:8:24.08:423,24,0
chr10	88772382	.	C	CA	2142.20	PASS	AC=14;AF=0.350;AN=40;BaseQRankSum=-5.217;DP=111;FS=14.045;HRun=1;HaplotypeScore=20.0130;InbreedingCoeff=0.7302;MQ=74.60;MQ0=0;MQRankSum=0.246;QD=36.31;ReadPosRankSum=0.401;VQSLOD=1.4005;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:15.05:237,15,0	./.	0/0:6,0:3:8.98:0,9,100	0/0:8,0:7:13.95:0,14,169	./.	0/0:5,0:5:12.04:0,12,164	./.	1/1:1,22:23:66.15:915,66,0	./.	1/1:0,1:1:3.01:48,3,0	./.	0/0:3,0:3:9.03:0,9,125	0/0:2,0:2:6:0,6,65	0/0:3,0:3:9.03:0,9,124	0/0:3,0:3:9.02:0,9,110	0/0:1,0:1:3.01:0,3,42	1/1:1,11:11:24.08:381,24,0	0/0:10,0:10:27.05:0,27,355	0/0:6,0:6:18.06:0,18,250	0/0:1,0:1:3.01:0,3,42	1/1:0,4:4:9.03:143,9,0	./.	./.	./.	0/0:2,0:2:6.02:0,6,82	1/1:0,3:3:9.03:144,9,0	0/0:1,0:1:3.01:0,3,41	1/1:0,9:9:27.09:430,27,0
chr10	88778824	.	TTTCC	T	286.49	PASS	AC=12;AF=0.462;AN=26;BaseQRankSum=2.051;DP=541;FS=0.000;HRun=0;HaplotypeScore=15.7965;InbreedingCoeff=0.5517;MQ=8.42;MQ0=471;MQRankSum=-0.091;QD=2.19;ReadPosRankSum=-0.593;VQSLOD=0.4298;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:1:3.01:0,3,81	./.	./.	./.	./.	./.	./.	./.	0/0:21,0:1:3.01:0,3,81	0/0:22,0:6:18.06:0,18,467	0/0:12,0:5:15.05:0,15,306	1/1:25,3:3:6.02:113,6,0	1/1:13,1:1:3.01:56,3,0	./.	./.	1/1:11,1:1:3.01:57,3,0	./.	1/1:32,1:1:3.01:57,3,0	./.	./.	./.	1/1:4,7:4:3.01:57,3,0	./.	./.	0/0:11,0:2:6.02:0,6,162	0/0:16,0:6:18.06:0,18,422	1/1:31,2:2:3.01:57,3,0	0/0:12,0:4:12.04:0,12,323
chr10	88781308	.	AGTTGCGAAGCACTC	A	16816.43	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.780;DP=627;FS=19.344;HRun=0;HaplotypeScore=257.9323;InbreedingCoeff=0.9971;MQ=85.33;MQ0=0;MQRankSum=-15.168;QD=109.20;ReadPosRankSum=3.175;VQSLOD=3.5791;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,7023	0/0:10,0:10:30.10:0,30,2039	0/0:24,0:24:72.25:0,72,3646	0/0:25,0:25:75.22:0,75,3715	0/0:28,0:28:78.25:0,78,5005	0/0:20,0:20:60.20:0,60,3940	0/0:27,0:27:81.26:0,81,5035	0/0:32,0:32:96.32:0,96,6203	0/0:21,0:21:63.22:0,63,4352	0/0:32,0:32:96.33:0,96,6032	0/0:19,0:19:57.20:0,57,3626	0/0:25,0:25:75.26:0,75,4863	1/1:0,23:24:63.22:2764,63,0	0/0:21,0:21:63.19:0,63,3723	1/1:0,22:22:60:2636,60,0	1/1:0,20:20:54.19:2389,54,0	0/0:34,0:33:99:0,102,7016	0/0:13,0:13:39.13:0,39,2767	1/1:0,20:20:57.16:2170,57,0	1/1:0,17:17:48.16:1804,48,0	0/0:30,0:30:84.29:0,84,5712	0/0:21,0:21:63.20:0,63,3991	1/1:0,16:16:39.13:1652,39,0	1/1:0,11:11:15.05:635,15,0	0/0:24,0:24:72.25:0,72,4893	0/0:23,0:23:69.23:0,69,4456	1/1:0,24:24:62.36:2766,62,0	0/0:9,0:9:27.09:0,27,1951
chr10	88781354	.	G	GT	3655.60	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-12.521;DP=686;FS=2.644;HRun=2;HaplotypeScore=128.2569;InbreedingCoeff=0.9944;MQ=74.32;MQ0=0;MQRankSum=3.662;QD=38.48;ReadPosRankSum=-2.113;VQSLOD=2.7131;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.25:0,84,1028	0/0:18,0:18:51.16:0,51,632	0/0:12,0:10:16.38:0,16,170	0/0:18,0:19:32.52:0,33,347	0/0:34,0:34:99:0,99,1212	0/0:25,0:25:66.21:0,66,817	0/0:24,0:24:66.21:0,66,818	1/1:3,25:28:72.24:1036,72,0	0/0:19,0:19:48.15:0,48,594	0/0:20,0:20:51.15:0,51,620	0/0:24,0:24:69.21:0,69,847	0/0:32,0:32:96.29:0,96,1176	0/0:24,0:24:60.17:0,60,728	0/0:31,0:31:93.29:0,93,1151	0/0:29,0:29:72.14:0,72,870	0/0:22,0:22:60.19:0,60,741	0/0:35,0:34:99:0,99,1213	0/0:19,0:19:57.18:0,57,705	0/0:25,0:25:69.22:0,69,854	0/0:27,0:27:72.23:0,72,890	1/1:2,30:32:84.28:1209,84,0	0/0:26,0:26:75.21:0,75,912	0/0:29,0:29:75.24:0,75,925	0/0:19,0:19:45.06:0,45,536	0/0:20,0:20:57.18:0,57,706	1/1:1,28:29:50.07:1151,50,0	0/0:28,0:28:77.91:0,78,963	1/1:0,6:6:18.06:259,18,0
chr10	88781502	.	AGGTTGGTT	A	8422.98	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=4.648;DP=587;FS=0.480;HRun=0;HaplotypeScore=159.7022;InbreedingCoeff=0.8546;MQ=77.68;MQ0=5;MQRankSum=-11.408;QD=24.41;ReadPosRankSum=1.413;VQSLOD=4.3422;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:42:66.23:0,66,2228	0/0:4,0:4:5.99:0,6,117	0/0:31,0:22:9.03:0,9,287	0/0:35,0:32:9.02:0,9,125	1/1:8,11:19:21.07:505,21,0	1/1:9,14:23:39.13:945,39,0	1/1:14,9:23:21.07:528,21,0	1/1:9,0:9:3:27,3,0	0/0:9,0:23:48.16:0,48,1668	0/0:32,0:32:57.20:0,57,2330	0/0:22,0:22:48.15:0,48,1790	1/1:7,10:17:21.07:528,21,0	1/1:7,9:16:20.98:528,21,0	1/1:5,18:23:36.02:905,36,0	1/1:8,7:15:12.04:301,12,0	1/1:10,8:19:21.07:508,21,0	0/0:36,0:36:66.23:0,66,2576	1/1:14,10:24:15.05:377,15,0	1/1:16,6:22:18.06:453,18,0	1/1:11,9:21:27.01:640,27,0	1/1:10,7:17:3.01:59,3,0	1/1:8,12:19:15.05:342,15,0	1/1:5,10:15:18.06:396,18,0	1/1:16,5:20:3.01:75,3,0	0/0:17,0:17:27.07:0,27,1011	1/1:10,8:18:24.07:553,24,0	1/1:9,8:17:24.08:603,24,0	1/1:3,3:6:6.02:151,6,0
chr10	88781581	.	T	TTGGCTGGC	675.78	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=-0.825;DP=512;FS=0.000;HRun=0;HaplotypeScore=173.0644;InbreedingCoeff=0.6868;MQ=58.69;MQ0=3;MQRankSum=-2.379;QD=12.29;ReadPosRankSum=-2.603;VQSLOD=2.3695;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:27.04:0,27,695	0/0:8,0:8:6.02:0,6,127	0/0:19,0:17:5.93:0,6,68	0/0:21,0:19:7.38:0,7,115	0/0:8,0:8:3.01:0,3,76	0/0:22,0:21:18.05:0,18,406	0/0:29,0:29:48.11:0,48,1037	./.	0/0:15,0:15:27.09:0,27,635	0/0:20,0:20:15.04:0,15,331	0/0:14,0:14:15.04:0,15,328	0/0:22,0:22:42.14:0,42,958	0/0:19,0:19:21.05:0,21,430	0/0:28,0:28:30.09:0,30,660	0/0:22,0:22:54.18:0,54,1252	0/0:14,0:14:30.10:0,30,733	0/0:35,0:35:69.20:0,69,1607	0/0:22,0:22:54.10:0,54,1164	0/0:28,0:28:22.26:0,22,454	0/0:9,0:9:9.03:0,9,167	1/1:39,2:41:20.90:340,21,0	0/0:10,0:9:3.01:0,3,53	0/0:8,0:8:6.02:0,6,142	0/0:25,0:24:48.11:0,48,1073	0/0:10,0:10:21.05:0,21,378	1/1:9,1:10:9.87:214,10,0	0/0:15,0:14:12.04:0,12,301	1/1:0,3:4:6.02:247,6,0
chr10	88782238	.	TA	T	12261.03	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.521;DP=530;FS=4.303;HRun=7;HaplotypeScore=51.9878;InbreedingCoeff=0.9921;MQ=69.23;MQ0=1;MQRankSum=-4.109;QD=25.13;ReadPosRankSum=0.548;VQSLOD=5.3418;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:57.13:581,57,0	1/1:1,11:12:30.07:304,30,0	0/0:15,0:15:30.09:0,30,358	0/0:9,0:7:17.89:0,18,199	1/1:0,16:16:48.07:480,48,0	1/1:0,16:16:42.10:428,42,0	1/1:1,6:7:18.04:183,18,0	1/1:6,26:32:35.38:719,35,0	1/1:1,16:17:36.08:367,36,0	1/1:1,30:31:87.11:873,87,0	1/1:3,17:20:48.11:489,48,0	1/1:2,19:21:42.09:427,42,0	1/1:1,21:22:51.11:520,51,0	1/1:1,24:25:63.14:643,63,0	1/1:1,25:26:66.14:667,66,0	1/1:0,22:22:51.09:520,51,0	1/1:1,21:22:57.13:581,57,0	1/1:1,12:13:36.08:367,36,0	1/1:2,13:14:39.09:398,39,0	1/1:1,22:23:60.13:611,60,0	1/1:0,17:17:45.10:459,45,0	1/1:3,10:13:24.05:245,24,0	1/1:3,13:16:42.06:418,42,0	1/1:1,16:17:39.09:398,39,0	0/0:18,0:18:48.15:0,48,604	1/1:3,24:26:69.13:695,69,0	1/1:4,24:28:63.14:643,63,0	1/1:1,9:10:24.05:245,24,0
chr10	88783296	.	TACA	T	6826.62	PASS	AB=0.522;AC=15;AF=0.268;AN=56;BaseQRankSum=12.368;DP=598;FS=6.921;HRun=0;HaplotypeScore=142.2325;InbreedingCoeff=0.9323;MQ=81.38;MQ0=0;MQRankSum=-3.109;QD=36.51;ReadPosRankSum=2.902;VQSLOD=5.2118;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.23:0,66,1428	0/0:14,0:14:39.13:0,39,844	0/0:19,0:19:54.09:0,54,974	0/0:14,0:14:36.12:0,36,668	0/0:29,0:29:84.29:0,84,1758	0/0:20,0:20:54.18:0,54,1128	0/0:18,0:18:54.19:0,54,1152	0/0:31,0:31:78.27:0,78,1643	0/0:27,0:27:81.26:0,81,1681	0/0:22,0:22:57.20:0,57,1224	0/0:19,0:19:57.20:0,57,1234	0/0:15,0:15:39.13:0,39,823	1/1:2,15:17:48.13:715,48,0	0/0:24,0:24:60.21:0,60,1283	1/1:2,22:24:57.19:882,57,0	0/1:2,22:24:4.76:832,0,5	0/0:12,0:12:36.12:0,36,770	0/0:16,0:16:39.13:0,39,818	1/1:4,11:15:33.10:494,33,0	1/1:5,25:29:66.18:1005,66,0	0/0:13,0:13:36.12:0,36,780	0/0:19,0:19:51.17:0,51,1063	1/1:3,26:29:74.94:1162,75,0	1/1:1,16:17:35.97:563,36,0	0/0:27,0:27:75.25:0,75,1566	0/0:18,0:18:51.18:0,51,1105	1/1:3,28:31:75.13:1173,75,0	0/0:29,0:29:87.30:0,87,1884
chr10	88784388	.	T	TA	6151.02	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-14.688;DP=678;FS=3.385;HRun=5;HaplotypeScore=64.3087;InbreedingCoeff=0.9975;MQ=83.98;MQ0=0;MQRankSum=-1.881;QD=32.55;ReadPosRankSum=0.110;VQSLOD=5.3999;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1256	0/0:11,0:11:30.07:0,30,322	0/0:21,0:21:55.48:0,55,494	0/0:18,0:18:16.11:0,16,346	0/0:22,0:22:63.13:0,63,660	0/0:18,0:18:51.13:0,51,548	0/0:26,0:26:69.17:0,69,742	0/0:29,0:29:72.16:0,72,761	0/0:25,0:25:72.16:0,72,758	0/0:32,0:32:84.20:0,84,897	0/0:23,0:23:66.16:0,66,709	0/0:29,0:29:78.19:0,78,838	1/1:4,18:22:51.17:671,51,0	0/0:38,0:38:99:0,102,1072	1/1:2,30:32:75.24:987,75,0	1/1:1,28:29:78.25:1026,78,0	0/0:24,0:24:69.12:0,69,721	0/0:16,0:16:45.09:0,45,469	1/1:4,25:29:71.33:945,71,0	1/1:3,13:16:36.12:474,36,0	0/0:33,0:33:93.23:0,93,999	0/0:17,0:17:45.11:0,45,483	1/1:1,9:10:24.08:316,24,0	1/1:1,23:24:63.20:829,63,0	0/0:25,0:25:75.16:0,75,796	0/0:27,0:27:75.18:0,75,799	1/1:2,25:27:69.22:903,69,0	0/0:16,0:16:48.12:0,48,516
chr10	88784907	.	AGATCTCT	A	4491.05	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.312;DP=663;FS=6.587;HRun=0;HaplotypeScore=184.2827;InbreedingCoeff=0.9995;MQ=63.01;MQ0=1;MQRankSum=-10.600;QD=65.09;ReadPosRankSum=-1.706;VQSLOD=4.3006;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,5101	0/0:10,0:10:27.09:0,27,932	0/0:24,0:23:69.23:0,69,2408	0/0:27,0:26:68.81:0,69,2387	0/0:22,0:22:66.21:0,66,2537	0/0:24,0:24:72.25:0,72,2832	0/0:33,0:33:93.32:0,93,3563	1/1:1,15:16:42.13:943,42,0	0/0:27,0:27:81.28:0,81,3063	0/0:29,0:29:84.29:0,84,3380	0/0:13,0:13:39.13:0,39,1575	0/0:33,0:33:99:0,99,3687	0/0:25,0:25:75.26:0,75,2963	0/0:29,0:29:84.29:0,84,3364	0/0:33,0:33:93.32:0,93,3652	0/0:27,0:27:69.24:0,69,2782	0/0:22,0:22:66.23:0,66,2552	0/0:19,0:19:54.19:0,54,2111	0/0:17,0:17:39.13:0,39,1421	0/0:13,0:13:39.13:0,39,1523	1/1:1,14:15:33.11:837,33,0	0/0:22,0:22:61.54:0,62,2485	0/0:14,0:14:42.14:0,42,1640	0/0:39,0:39:99:0,108,3937	0/0:27,0:27:81.28:0,81,3184	1/1:2,23:25:69.23:1763,69,0	0/0:22,0:22:60.21:0,60,2410	1/1:1,12:12:36.12:948,36,0
chr10	88784985	.	C	CAA	6848.66	PASS	AB=0.526;AC=23;AF=0.411;AN=56;BaseQRankSum=-2.866;DP=665;FS=14.730;HRun=9;HaplotypeScore=89.3924;InbreedingCoeff=0.9221;MQ=65.22;MQ0=3;MQRankSum=-2.700;QD=23.62;ReadPosRankSum=-0.484;VQSLOD=2.5784;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,117,1236	0/0:10,0:10:30.08:0,30,319	0/0:21,0:15:31.75:0,32,292	0/0:22,0:17:30.04:0,30,309	0/0:26,0:26:54.06:0,54,575	0/0:25,0:24:60.12:0,60,639	0/0:29,0:29:76.46:0,76,819	1/1:4,0:37:75.69:256,76,0	0/0:19,1:20:7.89:0,8,488	0/0:35,0:35:99:0,99,1022	0/0:29,0:29:75.16:0,75,790	0/0:19,0:19:42.06:0,42,447	1/1:5,12:18:36.12:554,36,0	0/0:19,0:19:42.05:0,42,438	1/1:5,28:33:63.21:963,63,0	1/1:2,16:20:48.12:679,48,0	0/0:24,0:24:60.12:0,60,638	0/0:15,0:15:36.07:0,36,383	1/1:5,10:16:36.10:513,36,0	1/1:3,23:26:69.23:1048,69,0	1/1:2,0:21:45.39:165,45,0	0/0:16,0:16:48.11:0,48,503	1/1:7,16:23:39.13:600,39,0	1/1:4,18:23:48.16:739,48,0	0/0:19,0:19:48.11:0,48,511	1/1:10,1:34:10.30:218,10,0	1/1:2,23:26:69.23:1062,69,0	0/1:1,0:10:6.87:50,0,7
chr10	88785395	.	T	TTTTG	7352.28	PASS	AB=0.550;AC=7;AF=0.125;AN=56;BaseQRankSum=-10.858;DP=704;FS=2.390;HRun=0;HaplotypeScore=129.3625;InbreedingCoeff=0.8496;MQ=82.45;MQ0=0;MQRankSum=-8.642;QD=75.80;ReadPosRankSum=-1.613;VQSLOD=5.8755;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.25:0,81,1657	0/0:13,0:13:39.12:0,39,775	0/0:22,0:22:59.75:0,60,1075	0/0:18,0:18:51.62:0,52,1002	0/0:28,0:28:84.29:0,84,1758	0/0:25,0:24:75.26:0,75,1555	0/0:16,0:16:48.16:0,48,1007	1/1:10,24:37:99:2811,105,0	0/0:19,0:19:57.18:0,57,1157	0/0:29,0:29:82.51:0,83,1721	0/0:32,0:32:93.31:0,93,1901	0/0:24,0:24:72.23:0,72,1471	0/0:28,0:28:84.29:0,84,1760	0/0:24,0:24:72.25:0,72,1505	0/0:34,0:34:99:0,99,2035	0/0:19,0:19:57.20:0,57,1193	0/0:23,0:23:66.20:0,66,1343	0/0:25,0:25:75.22:0,75,1525	0/0:23,0:23:69.23:0,69,1384	0/0:32,0:32:93.30:0,93,1908	1/1:0,18:20:54.14:1489,54,0	0/0:30,0:30:84.29:0,84,1758	0/0:38,0:38:99:0,111,2183	0/0:17,0:17:51.17:0,51,1049	0/0:25,0:25:75.24:0,75,1514	0/1:6,26:33:10.67:2444,0,11	0/0:35,0:35:99:0,105,2194	1/1:0,7:7:21.07:608,21,0
chr10	88786087	.	TCCTCCTCCTC	T	801.85	PASS	AB=0.809;AC=4;AF=0.074;AN=54;BaseQRankSum=-0.914;DP=565;FS=24.225;HRun=0;HaplotypeScore=262.7706;InbreedingCoeff=0.1168;MQ=34.89;MQ0=69;MQRankSum=0.362;QD=8.35;ReadPosRankSum=-0.990;VQSLOD=1.1767;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:59.14:0,59,883	0/1:11,0:10:4.28:187,0,4	./.	0/0:4,0:2:6.01:0,6,60	0/0:26,0:23:35.33:0,35,472	0/0:17,0:14:32.72:0,33,367	0/0:28,0:23:56.78:0,57,923	0/0:14,0:9:23.91:0,24,227	0/0:23,0:19:53.73:0,54,820	0/1:27,22:43:99:310,0,894	0/1:17,0:17:40.57:41,0,223	0/0:33,0:32:73.80:0,74,1091	0/0:19,0:17:41.25:0,41,558	0/0:28,0:26:62.98:0,63,903	0/0:24,0:19:48.04:0,48,724	0/0:11,0:11:27.01:0,27,347	0/1:9,2:13:4.18:372,0,4	0/0:16,0:14:36.02:0,36,636	0/0:9,0:5:5.95:0,6,59	0/0:14,0:11:26.64:0,27,277	0/0:37,0:25:36.32:0,36,424	0/0:27,0:25:12.73:0,13,512	0/0:17,0:13:20.52:0,21,314	0/0:18,0:15:29.94:0,30,406	0/0:27,0:24:59.91:0,60,892	0/0:30,0:28:58.45:0,58,813	0/0:9,0:8:21.01:0,21,282	0/0:5,0:2:3.01:0,3,87
chr10	88786119	.	T	TTCC	778.23	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=4.729;DP=655;FS=64.592;HRun=0;HaplotypeScore=293.6825;InbreedingCoeff=-0.3875;MQ=35.24;MQ0=93;MQRankSum=0.391;QD=1.60;ReadPosRankSum=-2.756;VQSLOD=-0.0355;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:25:47.60:48,0,76	0/0:15,0:11:19.25:0,19,151	1/1:5,0:3:5.49:33,5,0	0/1:2,0:1:0:0,0,0	0/1:41,0:36:16.24:16,0,143	0/1:24,0:21:99:117,0,120	0/1:31,0:25:9.56:10,0,198	0/1:19,0:11:23.04:110,0,23	0/1:37,0:30:17.49:17,0,150	0/1:51,0:45:99:124,0,313	0/1:25,0:25:35.53:36,0,149	0/1:36,0:32:34.93:35,0,148	0/0:15,0:12:10.85:0,11,130	0/1:35,0:30:7.31:7,0,147	0/1:13,0:11:33.30:46,0,33	0/1:12,0:10:17.64:81,0,18	0/0:14,0:10:7.23:0,7,102	0/0:21,0:19:3.36:0,3,213	0/0:11,0:9:15.02:0,15,183	0/0:23,0:20:11.91:0,12,123	0/0:14,13:16:2.94:0,3,19	0/1:37,0:35:38.75:39,0,292	0/1:25,0:20:1.19:1,0,68	0/1:12,0:8:0.61:1,0,30	0/0:36,0:32:1.79:0,2,335	0/1:33,0:29:99:123,0,288	0/1:18,0:16:81.52:82,0,186	0/0:7,0:2:6.02:0,6,71
chr10	88786131	.	C	CCCT	3080.72	PASS	AB=0.985;AC=26;AF=0.464;AN=56;BaseQRankSum=7.847;DP=652;FS=36.876;HRun=0;HaplotypeScore=299.3641;InbreedingCoeff=-0.5743;MQ=38.40;MQ0=83;MQRankSum=-6.525;QD=5.07;ReadPosRankSum=1.108;VQSLOD=1.6699;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:25:86.95:87,0,461	0/0:15,0:11:5.07:0,5,190	0/0:7,0:3:1.69:0,2,8	0/0:10,0:6:2:0,2,40	0/1:43,0:40:99:270,0,350	0/1:23,1:22:99:256,0,188	0/1:36,0:31:99:151,0,241	0/1:19,0:11:31.98:32,0,136	0/1:33,0:26:67.57:68,0,350	0/1:49,2:46:99:310,0,319	0/1:24,1:25:99:244,0,254	0/1:39,0:36:99:142,0,373	0/1:14,0:11:82.29:82,0,124	0/1:32,1:28:99:152,0,312	1/1:16,0:14:12.81:159,13,0	1/1:11,0:10:11.49:129,11,0	0/0:12,0:9:12.46:0,12,140	0/1:21,0:18:64.09:64,0,182	0/1:11,0:10:11.97:12,0,152	0/1:22,0:20:73.38:148,0,73	0/1:27,0:18:6.56:13,0,7	0/1:33,1:33:99:222,0,403	0/1:21,1:18:7.01:148,0,7	0/1:11,0:7:14.83:15,0,34	0/1:32,0:28:99:155,0,153	0/1:28,2:25:71.61:234,0,72	0/1:17,1:16:99:139,0,133	0/1:7,0:2:0:0,0,0
chr10	88786146	.	CTTCT	C	1197.22	PASS	AB=0.973;AC=22;AF=0.393;AN=56;BaseQRankSum=10.912;DP=520;FS=22.802;HRun=0;HaplotypeScore=279.4779;InbreedingCoeff=-0.4682;MQ=47.36;MQ0=30;MQRankSum=-4.037;QD=2.78;ReadPosRankSum=3.326;VQSLOD=1.1640;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,1:23:41.80:42,0,918	0/1:9,0:8:5.01:5,0,331	0/0:13,0:7:13.45:0,13,115	0/0:18,0:13:32.31:0,32,310	0/1:34,2:34:99:101,0,939	0/1:16,2:17:99:106,0,534	0/1:28,0:27:30.59:31,0,657	0/0:14,0:10:21.90:0,22,594	0/1:26,1:25:85.08:85,0,880	0/1:38,2:38:44.98:45,0,1217	0/1:25,1:26:99:101,0,752	0/1:26,1:28:99:119,0,862	0/1:11,0:10:23.97:24,0,242	0/1:26,0:25:34.43:34,0,831	1/1:11,0:11:18.72:106,19,0	0/1:5,0:5:2.66:6,0,3	0/0:10,0:8:9.39:0,9,260	0/1:17,0:15:13.62:14,0,329	0/0:7,0:7:20.98:0,21,385	0/1:12,0:11:25.92:26,0,321	0/0:23,0:19:9.92:0,10,151	0/1:29,4:33:99:212,0,760	0/1:17,0:15:86.18:86,0,149	0/1:8,0:6:18.47:18,0,58	0/1:20,1:19:99:119,0,408	0/1:18,0:16:64.14:64,0,495	0/1:14,0:12:14.99:15,0,278	0/0:3,0:2:5.98:0,6,60
chr10	88786153	.	TTCA	T	1419.96	PASS	AB=0.964;AC=23;AF=0.411;AN=56;BaseQRankSum=12.773;DP=384;FS=20.664;HRun=0;HaplotypeScore=216.2779;InbreedingCoeff=-0.3740;MQ=55.90;MQ0=7;MQRankSum=-6.677;QD=4.57;ReadPosRankSum=1.578;VQSLOD=1.2190;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:64.34:64,0,499	0/0:5,0:5:3.55:0,4,191	0/1:17,0:9:24.20:24,0,94	0/1:23,0:14:12.95:13,0,154	0/1:25,2:26:37.25:37,0,626	0/1:13,0:12:99:125,0,278	0/0:16,1:16:16:0,16,335	0/0:12,0:9:20.98:0,21,302	0/1:20,0:20:99:127,0,431	0/1:27,1:28:99:149,0,578	0/1:20,0:20:92.01:92,0,457	0/1:23,0:23:99:130,0,429	0/1:6,0:6:33.49:33,0,139	0/1:20,0:20:62.55:63,0,423	1/1:9,0:9:21.35:135,21,0	1/1:3,0:3:5.97:46,6,0	0/0:6,0:4:8.84:0,9,143	0/1:8,2:9:89.77:117,0,90	0/0:3,0:4:12:0,12,155	0/0:9,0:9:5.01:0,5,234	0/0:19,0:17:5.99:0,6,97	0/1:23,0:23:99:153,0,378	0/1:12,0:12:78.66:79,0,130	1/1:6,0:6:2.96:19,3,0	0/1:9,2:11:39.61:40,0,216	0/1:13,1:13:68.25:68,0,292	0/1:6,1:7:66.52:67,0,141	0/0:1,0:1:3.01:0,3,49
chr10	88786154	.	TCA	T	378.61	PASS	AB=0.934;AC=19;AF=0.339;AN=56;BaseQRankSum=8.949;DP=380;FS=1.222;HRun=0;HaplotypeScore=214.4327;InbreedingCoeff=-0.5038;MQ=56.12;MQ0=7;MQRankSum=-3.476;QD=1.30;ReadPosRankSum=0.163;VQSLOD=2.0972;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,1:19:15.28:15,0,165	0/0:5,0:5:11.67:0,12,86	0/1:17,0:9:17.47:17,0,61	0/1:24,0:14:13.85:14,0,179	0/1:22,5:26:55.01:55,0,226	0/1:11,0:12:19.75:20,0,129	0/1:16,0:16:6.99:7,0,92	0/0:11,0:8:13.37:0,13,97	0/1:19,1:20:14.60:15,0,175	0/0:25,2:28:9.35:0,9,236	0/1:17,2:20:37.15:37,0,168	0/1:20,1:22:52.86:53,0,142	0/0:6,0:6:13.64:0,14,92	0/1:17,3:20:71.01:71,0,195	0/1:8,1:9:17.26:41,0,17	0/1:2,1:3:9.08:36,0,9	0/0:6,0:4:8.55:0,9,53	0/1:10,0:9:21.83:22,0,23	0/0:4,0:4:8.74:0,9,63	0/0:9,0:9:20.95:0,21,120	0/0:18,0:17:4.97:0,5,42	0/1:15,4:22:32.71:33,0,172	0/1:11,1:12:20.61:21,0,63	0/1:6,0:6:7.30:7,0,17	0/1:9,2:11:52.77:53,0,61	0/1:14,0:13:10.04:10,0,127	0/1:7,0:7:3.31:3,0,61	0/0:1,0:1:2.97:0,3,20
chr10	88786155	.	C	CT	117.14	PASS	AB=0.899;AC=6;AF=0.107;AN=56;BaseQRankSum=8.090;DP=373;FS=4.555;HRun=2;HaplotypeScore=208.7085;InbreedingCoeff=-0.1675;MQ=56.52;MQ0=7;MQRankSum=-3.651;QD=1.48;ReadPosRankSum=2.355;VQSLOD=-0.4548;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,1:19:32.33:0,32,470	0/0:5,0:5:6.40:0,6,147	0/0:14,0:9:7.21:0,7,107	0/0:21,0:14:27.76:0,28,261	0/0:26,0:25:0.68:0,1,541	0/0:13,0:12:9.90:0,10,260	0/1:15,1:16:11.79:12,0,252	0/0:10,0:7:14.83:0,15,190	0/0:19,1:20:13.25:0,13,448	0/0:28,0:28:54.93:0,55,653	0/0:19,1:20:22.48:0,22,445	0/1:17,4:21:56.65:57,0,386	0/0:6,0:6:17.59:0,18,165	0/1:19,1:20:32.12:32,0,436	0/1:6,3:9:38.85:101,0,39	0/1:3,0:3:4.85:5,0,13	0/0:5,1:4:9.03:0,9,115	0/1:9,1:9:26.73:27,0,101	0/0:3,0:3:9.01:0,9,96	0/0:8,0:8:23.99:0,24,258	0/0:17,0:16:6.02:0,6,77	0/0:21,1:22:6.23:0,6,357	0/0:12,0:12:9.66:0,10,137	0/0:6,0:5:2.56:0,3,25	0/0:10,0:10:4.37:0,4,174	0/0:14,0:13:21.22:0,21,313	0/0:7,0:7:14:0,14,135	0/0:1,0:1:3.01:0,3,39
chr10	88786164	.	TGCC	T	578.49	PASS	AB=0.978;AC=22;AF=0.393;AN=56;BaseQRankSum=11.503;DP=374;FS=22.910;HRun=0;HaplotypeScore=203.0176;InbreedingCoeff=-0.2498;MQ=57.76;MQ0=5;MQRankSum=-5.147;QD=2.24;ReadPosRankSum=-0.117;VQSLOD=1.0708;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:34.95:35,0,617	0/0:6,1:7:13.26:0,13,200	0/0:18,0:10:13.28:0,13,196	0/0:28,0:20:5.84:0,6,383	0/1:23,0:23:4.09:4,0,956	0/1:12,0:11:39.92:40,0,218	0/0:18,0:18:23.46:0,23,485	0/1:11,0:8:1.53:2,0,133	0/1:19,1:20:99:114,0,514	0/1:24,0:24:1.74:2,0,935	0/1:21,0:21:38.12:38,0,628	0/1:21,1:22:79.64:80,0,545	0/1:5,0:5:12.05:12,0,140	0/1:20,2:22:55.79:56,0,793	1/1:7,0:6:13.54:77,14,0	1/1:2,1:3:5.93:49,6,0	0/0:6,0:4:7.97:0,8,152	0/1:10,0:10:54.23:54,0,121	0/1:3,0:3:12.95:13,0,76	0/0:8,0:8:3.50:0,3,444	0/0:15,0:15:8.96:0,9,139	0/1:17,1:18:81.38:81,0,404	0/1:10,0:10:37.44:37,0,179	1/1:5,0:4:2.04:6,2,0	0/0:10,0:10:9.42:0,9,283	0/1:15,0:14:4.13:4,0,465	0/1:6,1:7:28.96:29,0,130	0/0:1,0:1:3.01:0,3,67
chr10	88786167	.	C	CCCT	211.36	PASS	AB=0.967;AC=10;AF=0.179;AN=56;BaseQRankSum=6.285;DP=379;FS=2.603;HRun=0;HaplotypeScore=215.8003;InbreedingCoeff=-0.0792;MQ=57.40;MQ0=4;MQRankSum=-3.810;QD=1.81;ReadPosRankSum=-0.594;VQSLOD=2.5826;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:34.85:0,35,594	0/0:7,0:7:5.79:0,6,210	0/0:20,0:9:9.24:0,9,204	0/0:33,0:21:35.50:0,35,459	0/1:23,1:24:57.71:58,0,778	0/0:12,0:11:28.10:0,28,302	0/0:18,0:18:18.75:0,19,418	0/1:12,0:9:8.80:9,0,190	0/0:19,1:20:25.40:0,25,554	0/0:24,0:24:51.90:0,52,840	0/0:20,0:20:9.68:0,10,581	0/1:20,2:22:75.56:76,0,495	0/0:5,0:5:14.02:0,14,190	0/1:21,1:22:27.59:28,0,708	0/1:8,0:7:29.04:55,0,29	0/1:3,0:3:18.44:27,0,18	0/0:6,0:4:8.99:0,9,129	0/0:10,0:10:11.40:0,11,146	0/0:3,0:3:8.04:0,8,84	0/0:8,0:8:20.58:0,21,380	0/0:15,0:15:8.98:0,9,81	0/0:17,1:18:0.94:0,1,409	0/1:8,1:9:39.79:40,0,157	1/1:6,0:5:4.30:53,4,0	0/1:11,0:11:3.23:3,0,247	0/0:15,0:14:34.01:0,34,373	0/0:7,0:7:9.75:0,10,152	0/0:1,0:1:3.01:0,3,35
chr10	88786181	.	CTA	C	996.61	PASS	AB=0.911;AC=20;AF=0.357;AN=56;BaseQRankSum=6.978;DP=336;FS=8.884;HRun=0;HaplotypeScore=141.4439;InbreedingCoeff=-0.2923;MQ=54.65;MQ0=7;MQRankSum=-4.151;QD=5.01;ReadPosRankSum=-2.517;VQSLOD=2.1411;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,1:15:80.37:80,0,498	0/1:6,1:7:52.13:52,0,196	0/0:32,4:10:23.55:0,24,330	0/0:41,1:20:5.14:0,5,349	0/1:21,0:21:15.98:16,0,954	0/1:6,2:7:99:100,0,159	0/0:18,0:18:26.59:0,27,546	0/1:5,2:6:25.99:52,0,26	0/1:12,1:13:67:67,0,419	0/1:23,2:25:54.87:55,0,856	0/1:12,1:13:25.57:26,0,557	0/1:17,3:20:99:164,0,482	0/0:3,0:3:9.03:0,9,155	0/1:17,3:20:86.49:86,0,720	1/1:5,1:5:11.39:112,11,0	1/1:1,1:2:3.01:30,3,0	0/0:4,0:2:6.02:0,6,121	0/1:8,0:8:78.25:78,0,106	0/0:2,0:2:6.02:0,6,112	0/0:7,1:8:21.06:0,21,424	0/0:12,0:12:5.94:0,6,63	0/1:11,3:14:99:141,0,327	0/1:4,0:4:8.44:8,0,170	0/1:3,0:2:0:0,0,0	0/1:8,0:8:49.06:49,0,223	0/0:10,0:10:23.98:0,24,327	0/1:4,1:5:37.20:37,0,101	0/0:1,0:1:3.01:0,3,32
chr10	88786182	.	TAC	T	1157.91	PASS	AB=0.884;AC=19;AF=0.352;AN=54;BaseQRankSum=7.068;DP=334;FS=15.508;HRun=0;HaplotypeScore=138.0364;InbreedingCoeff=-0.3063;MQ=54.71;MQ0=9;MQRankSum=-4.517;QD=6.03;ReadPosRankSum=-1.610;VQSLOD=2.2834;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,2:15:70.77:71,0,493	0/1:6,0:6:55.12:55,0,196	0/0:33,2:10:23.49:0,23,310	0/0:39,0:20:22.94:0,23,374	0/1:19,2:21:61.67:62,0,945	0/1:7,0:6:81.83:82,0,156	0/0:16,2:18:15.18:0,15,545	0/1:5,2:6:7.51:89,0,8	0/1:10,3:13:99:121,0,414	0/1:22,2:24:86.59:87,0,844	0/1:12,1:13:54.34:54,0,549	0/1:16,4:20:99:182,0,479	0/0:4,0:4:9.03:0,9,150	0/1:18,2:20:68.79:69,0,702	1/1:2,4:5:9.50:145,10,0	1/1:2,0:2:2.88:15,3,0	0/0:3,1:2:6.02:0,6,122	0/1:5,3:8:99:105,0,106	0/0:2,0:2:6.02:0,6,114	0/0:8,0:8:21.06:0,21,424	0/0:11,1:12:6.02:0,6,75	0/1:11,2:13:87.93:88,0,318	0/1:3,1:4:26.83:27,0,170	./.	0/1:7,1:8:47.04:47,0,223	0/0:9,0:9:20.76:0,21,332	0/1:5,0:5:18.38:18,0,102	0/0:1,0:1:3.01:0,3,38
chr10	88786183	.	A	ACTC	321.35	PASS	AB=0.992;AC=11;AF=0.196;AN=56;BaseQRankSum=1.714;DP=336;FS=6.905;HRun=0;HaplotypeScore=147.3422;InbreedingCoeff=0.3967;MQ=52.71;MQ0=10;MQRankSum=-1.343;QD=3.92;ReadPosRankSum=-3.038;VQSLOD=1.2723;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:15.16:0,15,181	0/1:6,0:6:3.06:3,0,90	0/0:36,0:11:5.69:0,6,53	0/1:40,0:18:5.58:6,0,134	0/0:21,0:21:41.28:0,41,462	0/0:7,0:6:12.75:0,13,103	0/0:18,0:18:19.36:0,19,250	1/1:8,0:7:3.11:6,3,0	0/0:13,0:13:20.40:0,20,207	0/0:24,0:24:39.05:0,39,456	0/0:14,0:14:7.33:0,7,216	0/0:19,0:19:13.57:0,14,199	0/0:4,0:4:3.01:0,3,39	0/0:20,0:20:13.48:0,13,253	0/0:6,0:5:4.88:0,5,25	0/0:2,0:2:2.94:0,3,18	0/0:5,0:2:5.98:0,6,62	0/0:8,0:8:2.69:0,3,55	0/0:2,0:2:5.99:0,6,59	0/0:8,0:8:18.05:0,18,226	1/1:10,2:12:6.02:123,6,0	0/0:13,0:13:4.57:0,5,164	0/0:4,0:4:9.02:0,9,99	0/1:3,0:2:0:0,0,0	0/0:8,0:8:3.20:0,3,112	1/1:3,6:9:11.78:246,12,0	0/0:4,0:4:4.26:0,4,42	1/1:0,1:1:3.01:62,3,0
chr10	88786762	.	GTA	G	5989.91	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=7.816;DP=517;FS=5.754;HRun=0;HaplotypeScore=77.3899;InbreedingCoeff=0.9877;MQ=72.22;MQ0=0;MQRankSum=-0.009;QD=36.52;ReadPosRankSum=5.213;VQSLOD=6.8571;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39.13:0,39,718	0/0:6,0:6:18.06:0,18,337	0/0:12,0:12:31.73:0,32,537	0/0:4,0:4:9.03:0,9,168	0/0:20,0:20:60.21:0,60,1116	0/0:19,0:19:57.16:0,57,995	0/0:11,0:11:33.11:0,33,597	0/0:42,0:42:99:0,123,2066	0/0:11,0:11:30.09:0,30,520	0/0:17,0:17:45.15:0,45,825	0/0:27,0:27:78.25:0,78,1404	0/0:17,0:17:51.16:0,51,909	1/1:0,21:21:57.19:839,57,0	0/0:9,0:9:24.08:0,24,436	1/1:0,23:23:60.20:883,60,0	1/1:0,14:14:36.12:530,36,0	0/0:21,0:21:54.14:0,54,923	0/0:16,0:16:42.10:0,42,730	1/1:3,14:17:44.97:612,45,0	1/1:3,18:21:45.15:662,45,0	0/0:9,0:9:24.08:0,24,449	0/0:19,0:19:54.17:0,54,980	1/1:1,17:18:48.16:707,48,0	1/1:2,10:12:24.08:353,24,0	0/0:30,0:30:90.28:0,90,1610	0/0:30,0:30:90.31:0,90,1667	1/1:0,38:38:96.32:1404,96,0	0/0:19,0:19:48.16:0,48,899
chr10	88786776	.	ATACT	A	4653.19	PASS	AB=0.519;AC=7;AF=0.125;AN=56;BaseQRankSum=3.872;DP=512;FS=2.590;HRun=0;HaplotypeScore=104.6941;InbreedingCoeff=0.8296;MQ=76.17;MQ0=0;MQRankSum=-7.016;QD=46.53;ReadPosRankSum=-2.470;VQSLOD=5.0200;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.13:0,39,1053	0/0:6,0:6:18.06:0,18,486	0/0:14,0:14:35.61:0,36,964	0/0:8,0:8:24:0,24,522	0/0:21,0:21:63.22:0,63,1697	0/0:21,0:21:63.22:0,63,1654	0/0:13,0:13:39.13:0,39,1043	1/1:6,38:44:99:2028,111,0	0/0:9,0:9:24.08:0,24,648	0/0:19,0:19:54.18:0,54,1358	0/0:21,0:21:63.22:0,63,1656	0/0:18,0:18:54.19:0,54,1441	0/0:21,0:21:57.20:0,57,1534	0/0:13,0:13:39.12:0,39,998	0/0:20,0:20:51.17:0,51,1353	0/0:15,0:15:39.13:0,39,1019	0/0:18,0:18:54.19:0,54,1448	0/0:14,0:14:36.12:0,36,972	0/0:17,0:17:39.13:0,39,955	0/0:20,0:20:54.19:0,54,1447	1/1:0,7:7:17.15:323,17,0	0/0:16,0:16:45.15:0,45,1168	0/0:18,0:18:51.18:0,51,1377	0/0:12,0:12:30.10:0,30,810	0/0:28,0:28:84.29:0,84,2210	0/1:2,25:27:80.81:1277,0,81	0/0:37,0:37:99:0,105,2778	1/1:0,22:22:54.19:1025,54,0
chr10	88786897	.	T	TGAC	459.99	PASS	AB=0.787;AC=2;AF=0.036;AN=56;BaseQRankSum=5.130;DP=573;FS=5.020;HRun=0;HaplotypeScore=102.7261;InbreedingCoeff=-0.0371;MQ=74.66;MQ0=0;MQRankSum=5.130;QD=15.86;ReadPosRankSum=-2.304;VQSLOD=2.6827;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.29:0,84,1553	0/0:8,0:8:24.07:0,24,417	0/1:10,5:15:99:302,0,418	0/1:11,3:14:99:247,0,347	0/0:30,0:30:87.28:0,87,1589	0/0:27,0:27:81.28:0,81,1503	0/0:11,0:11:33.11:0,33,610	0/0:40,0:40:99:0,120,2192	0/0:12,0:12:33.11:0,33,615	0/0:27,0:27:81.27:0,81,1482	0/0:26,0:26:78.27:0,78,1442	0/0:18,0:18:51.17:0,51,951	0/0:22,0:22:66.23:0,66,1229	0/0:11,0:11:33.11:0,33,615	0/0:16,0:16:48.15:0,48,862	0/0:21,0:21:60.21:0,60,1111	0/0:20,0:20:57.20:0,57,1057	0/0:27,0:27:75.22:0,75,1345	0/0:18,0:18:51.15:0,51,879	0/0:21,0:21:63.22:0,63,1173	0/0:14,0:14:42.14:0,42,783	0/0:14,0:14:42.14:0,42,783	0/0:19,0:19:54.19:0,54,1006	0/0:24,0:24:69.24:0,69,1272	0/0:26,0:26:72.25:0,72,1337	0/0:24,0:24:72.24:0,72,1314	0/0:27,0:27:81.28:0,81,1506	0/0:13,0:13:39.13:0,39,692
chr10	88787595	.	C	CAT	10090.93	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=-16.074;DP=578;FS=2.359;HRun=0;HaplotypeScore=59.2817;InbreedingCoeff=0.9587;MQ=69.40;MQ0=1;MQRankSum=-2.221;QD=39.73;ReadPosRankSum=-0.920;VQSLOD=6.4288;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:54.16:0,54,682	0/0:10,0:10:24.08:0,24,309	0/0:9,0:9:20.80:0,21,243	0/1:5,0:5:0.72:1,0,34	0/0:38,0:38:99:0,102,1300	0/0:25,0:25:63.20:0,63,811	0/0:12,0:12:30.10:0,30,386	1/1:4,33:38:99:1645,102,0	0/0:22,0:22:63.20:0,63,810	0/0:38,0:38:99:0,99,1274	0/0:27,0:27:75.24:0,75,964	0/0:15,0:15:36.11:0,36,452	1/1:2,15:18:45.15:754,45,0	0/0:15,0:15:45.14:0,45,567	1/1:3,25:28:66.23:1114,66,0	1/1:3,15:19:39.13:658,39,0	0/0:26,0:26:63.18:0,63,793	0/0:25,0:25:57.17:0,57,717	1/1:3,21:23:60.21:1010,60,0	1/1:5,13:19:39.13:643,39,0	1/1:2,10:12:27.09:456,27,0	0/0:8,0:8:21.06:0,21,256	1/1:1,12:13:33.11:556,33,0	1/1:3,9:13:24.08:404,24,0	0/0:32,0:32:81.26:0,81,1043	1/1:3,22:25:66.21:1078,66,0	1/1:3,24:28:69.24:1164,69,0	1/1:0,12:12:36.12:607,36,0
chr10	88789725	.	T	TA	3763.75	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-13.362;DP=512;FS=0.390;HRun=9;HaplotypeScore=80.4238;InbreedingCoeff=0.9683;MQ=76.87;MQ0=0;MQRankSum=0.096;QD=25.26;ReadPosRankSum=0.234;VQSLOD=3.9358;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:29.66:0,30,245	0/0:8,0:8:20.99:0,21,182	0/0:14,0:14:26.89:0,27,224	0/0:9,0:9:22.53:0,23,180	1/1:6,31:37:67.10:929,67,0	1/1:5,24:29:69.19:763,69,0	1/1:4,14:18:41.33:438,41,0	0/0:1,0:23:39.16:0,39,117	0/0:11,0:11:32.99:0,33,286	0/0:24,0:24:56.97:0,57,495	0/0:25,0:25:62.97:0,63,547	1/1:1,15:16:42.11:464,42,0	0/0:14,0:14:35.97:0,36,312	1/1:5,11:16:4.03:272,4,0	0/0:23,0:23:56.94:0,57,488	0/0:16,0:16:41.98:0,42,365	0/0:11,0:11:20.98:0,21,182	1/1:5,12:17:46.26:464,46,0	0/0:15,0:15:32.99:0,33,286	0/0:22,0:22:50.96:0,51,443	0/0:1,0:13:24.44:0,24,71	1/1:1,14:16:41.91:432,42,0	0/0:24,0:24:59.97:0,60,521	0/0:14,0:14:32.96:0,33,281	0/0:10,0:11:32.03:0,32,266	0/0:3,0:34:64.10:0,64,206	0/0:30,0:30:86.98:0,87,755	0/0:1,0:11:18.33:0,18,54
chr10	88790590	.	CACAGGGGTAATG	C	3068.17	PASS	AB=0.791;AC=3;AF=0.054;AN=56;BaseQRankSum=9.540;DP=806;FS=79.823;HRun=0;HaplotypeScore=274.4644;InbreedingCoeff=-0.0566;MQ=77.84;MQ0=0;MQRankSum=-8.902;QD=28.94;ReadPosRankSum=3.020;VQSLOD=0.2288;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,8172	0/0:14,0:14:42.14:0,42,2547	0/0:15,0:15:42.14:0,42,2077	0/0:20,0:20:42.21:0,42,2903	0/0:30,0:30:90.31:0,90,5473	0/0:29,0:29:87.30:0,87,5118	0/0:14,0:14:39.13:0,39,2281	0/0:29,0:29:81.28:0,81,4180	0/0:27,0:27:78.27:0,78,4805	0/0:28,0:28:78.27:0,78,4751	0/0:36,0:36:99:0,102,5927	0/0:24,0:24:69.24:0,69,4149	0/0:34,0:34:96.33:0,96,5750	0/0:27,0:27:78.27:0,78,4426	0/0:30,0:30:87.29:0,87,4922	0/0:20,0:20:57.20:0,57,3509	0/0:25,0:25:66.23:0,66,3975	0/0:20,0:20:54.19:0,54,2820	0/0:18,0:18:54.19:0,54,2983	0/0:45,0:45:99:0,129,7378	0/0:57,0:57:99:0,166,9717	0/0:27,0:27:81.26:0,81,4633	0/0:30,0:30:90.31:0,90,5380	0/0:29,0:29:87.30:0,87,5346	0/0:26,0:26:75.25:0,75,4301	0/1:23,13:36:99:1368,0,3516	0/1:35,15:50:99:1522,0,5356	0/1:17,3:20:99:278,0,2587
chr10	88791081	.	GT	G	4788.98	PASS	AB=0.895;AC=23;AF=0.411;AN=56;BaseQRankSum=-0.081;DP=677;FS=3.276;HRun=11;HaplotypeScore=97.2625;InbreedingCoeff=0.8663;MQ=78.16;MQ0=0;MQRankSum=1.992;QD=17.04;ReadPosRankSum=2.189;VQSLOD=5.5437;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:48.12:0,48,512	1/1:1,6:7:8.98:74,9,0	0/1:15,2:17:23.67:24,0,160	0/0:14,1:15:2.01:0,2,176	1/1:6,30:37:86.86:714,87,0	1/1:4,14:18:6.96:264,7,0	1/1:5,15:20:44.92:369,45,0	0/0:10,0:35:71.61:0,72,400	0/0:33,0:33:87.22:0,87,928	1/1:8,28:36:51.82:625,52,0	1/1:2,17:19:41.92:345,42,0	1/1:5,24:29:65.89:542,66,0	0/0:26,1:27:44.52:0,45,673	1/1:2,25:27:71.91:591,72,0	0/0:31,0:31:72.18:0,72,768	0/0:25,2:27:35.48:0,35,569	1/1:2,30:32:57.91:682,58,0	1/1:3,8:11:17.96:148,18,0	0/0:19,0:19:33.03:0,33,327	0/0:26,0:28:56.95:0,57,571	0/0:1,0:10:19.89:0,20,100	1/1:9,19:28:24.92:411,25,0	0/0:31,0:31:44.53:0,45,672	0/0:11,1:12:8.44:0,8,279	0/0:23,0:23:51.99:0,52,528	0/0:7,0:30:54.24:0,54,310	0/0:25,1:27:38.32:0,38,587	0/0:4,0:28:53.97:0,54,270
chr10	88794168	.	CAAA	C	2856.87	PASS	AB=0.768;AC=24;AF=0.429;AN=56;BaseQRankSum=4.149;DP=552;FS=5.915;HRun=16;HaplotypeScore=108.0173;InbreedingCoeff=0.8323;MQ=67.28;MQ0=0;MQRankSum=-1.381;QD=11.16;ReadPosRankSum=6.162;VQSLOD=0.7589;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:14:28.13:0,28,206	0/0:1,0:5:12.44:0,12,96	0/0:16,0:10:8.79:0,9,93	0/1:16,0:10:8.13:8,0,74	0/0:24,0:24:45.61:0,46,409	0/0:28,0:28:59.19:0,59,711	0/0:13,0:14:30.02:0,30,360	1/1:6,1:19:32.51:201,33,0	0/0:9,0:21:49.11:0,49,381	0/0:11,0:23:42.98:0,43,317	0/0:9,0:28:66.90:0,67,527	0/0:12,0:15:29.97:0,30,317	1/1:5,10:16:29.82:292,30,0	0/0:17,0:18:23.83:0,24,252	1/1:4,12:16:19.15:222,19,0	1/1:9,9:20:24.30:257,24,0	0/0:16,0:25:45.32:0,45,382	0/0:16,0:16:30.04:0,30,362	1/1:8,3:11:7.22:84,7,0	1/1:16,19:39:32.32:348,32,0	1/1:4,0:12:12:69,12,0	0/0:19,0:21:44.51:0,45,487	1/1:1,17:20:37.34:402,37,0	0/1:4,8:13:18.44:228,0,18	0/0:8,0:24:15.59:0,16,99	1/1:6,0:30:63.79:358,64,0	1/1:5,13:21:29.26:287,29,0	1/1:2,0:22:52.82:320,53,0
chr10	88794169	.	A	AAC	2846.85	PASS	AB=0.813;AC=22;AF=0.393;AN=56;BaseQRankSum=-1.981;DP=566;FS=5.256;HRun=0;HaplotypeScore=114.0016;InbreedingCoeff=0.7429;MQ=66.29;MQ0=0;MQRankSum=-1.670;QD=11.48;ReadPosRankSum=-0.579;VQSLOD=3.2363;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:33.24:0,33,269	0/0:6,0:6:11.98:0,12,100	0/0:18,0:9:1.20:0,1,81	0/0:18,0:10:16.83:0,17,186	1/1:6,18:25:0.47:317,0,0	0/1:12,16:30:18.70:523,0,19	1/1:8,6:14:20.37:239,20,0	1/1:18,0:18:40.92:236,41,0	0/0:21,0:21:48.75:0,49,440	0/1:24,0:24:8.78:9,0,356	0/0:32,0:31:52.89:0,53,564	1/1:13,1:14:22.94:291,23,0	0/0:17,0:17:35.56:0,36,340	1/1:9,11:20:11.35:113,11,0	0/0:15,0:15:24.52:0,25,247	0/0:21,0:21:43.31:0,43,436	0/0:27,0:27:41.65:0,42,435	1/1:5,10:19:0.95:275,1,0	0/0:11,0:11:22.02:0,22,215	0/0:38,0:38:82.37:0,82,719	1/1:12,0:12:31.02:190,31,0	1/1:9,13:22:26.57:412,27,0	0/0:20,0:20:45.02:0,45,462	0/0:13,0:13:35.98:0,36,339	0/0:26,0:26:25.98:0,26,386	1/1:28,0:28:62.03:310,62,0	0/0:21,0:21:27.93:0,28,405	1/1:22,0:22:34.05:135,34,0
chr10	88794170	.	A	AC	1984.90	PASS	AB=0.944;AC=14;AF=0.250;AN=56;BaseQRankSum=1.209;DP=575;FS=1.646;HRun=0;HaplotypeScore=105.9940;InbreedingCoeff=0.4310;MQ=65.24;MQ0=0;MQRankSum=-1.932;QD=9.64;ReadPosRankSum=2.286;VQSLOD=4.1394;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:36.68:0,37,300	0/0:6,0:6:12.01:0,12,109	0/0:17,0:8:16.66:0,17,101	0/0:18,0:10:12.57:0,13,191	0/1:25,0:25:99:189,0,100	0/1:25,4:29:48.93:276,0,49	0/1:11,2:13:0.07:135,0,0	1/1:18,0:18:47.19:270,47,0	0/0:21,0:21:37.97:0,38,475	0/0:24,0:24:62.38:0,62,492	0/0:34,0:33:63.40:0,63,655	0/1:16,0:16:34.24:160,0,34	0/0:18,0:18:34.51:0,35,277	0/0:17,0:17:1.46:0,1,103	0/0:18,0:18:28.21:0,28,227	0/0:21,0:21:26.87:0,27,361	0/0:28,0:28:49.30:0,49,502	0/1:20,0:20:22.10:100,0,22	0/0:11,1:12:4.03:0,4,198	0/0:38,0:38:76.64:0,77,599	1/1:12,0:12:31.86:200,32,0	0/1:21,2:23:52.80:226,0,53	0/0:21,0:21:44.78:0,45,365	0/0:13,0:13:32.74:0,33,267	0/0:28,0:28:26.80:0,27,304	1/1:28,0:28:69.98:365,70,0	0/0:21,0:21:39.51:0,40,335	1/1:22,0:22:48.52:241,49,0
chr10	88794548	.	GA	G	4080.19	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=4.281;DP=617;FS=2.506;HRun=9;HaplotypeScore=73.3837;InbreedingCoeff=0.9983;MQ=81.38;MQ0=0;MQRankSum=-0.237;QD=23.18;ReadPosRankSum=1.603;VQSLOD=4.6467;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:66.20:0,66,762	0/0:7,0:7:21.06:0,21,242	0/0:22,0:22:22.30:0,22,333	0/0:16,0:15:31.79:0,32,363	0/0:35,0:35:87.26:0,87,1002	0/0:13,0:14:26.91:0,27,292	0/0:24,0:25:69.04:0,69,776	0/0:33,0:33:56.07:0,56,418	0/0:19,0:19:51.14:0,51,577	0/0:27,0:27:78.22:0,78,890	0/0:16,0:15:36.11:0,36,415	0/0:17,0:18:47.97:0,48,532	1/1:4,23:27:66.02:604,66,0	0/0:22,0:22:63.19:0,63,727	1/1:1,18:19:51.03:467,51,0	0/0:17,0:17:51.15:0,51,588	0/0:27,0:27:78.23:0,78,900	0/0:33,0:33:78.23:0,78,900	1/1:1,24:25:69:621,69,0	1/1:2,18:20:48.02:439,48,0	0/0:10,0:10:26.10:0,26,149	0/0:22,0:22:54.16:0,54,623	1/1:4,16:20:42.01:384,42,0	1/1:2,11:13:33.01:302,33,0	1/1:1,27:28:75.04:686,75,0	0/0:33,0:33:86.87:0,87,504	1/1:3,21:24:63.03:577,63,0	0/0:18,0:18:46.83:0,47,288
chr10	88796054	.	C	CAT	3867.63	PASS	AB=1.000;AC=46;AF=0.885;AN=52;BaseQRankSum=3.396;DP=360;FS=0.848;HRun=0;HaplotypeScore=116.1626;InbreedingCoeff=0.3472;MQ=71.28;MQ0=3;MQRankSum=1.887;QD=12.36;ReadPosRankSum=1.171;VQSLOD=3.4626;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:18:28.28:148,28,0	1/1:6,0:6:8.63:62,9,0	./.	0/0:7,0:4:3.01:0,3,33	1/1:11,0:11:9.55:85,10,0	1/1:18,0:18:8.33:81,8,0	0/1:7,0:7:11.52:51,0,12	1/1:20,0:20:7.71:59,8,0	1/1:12,0:12:22.34:102,22,0	1/1:19,0:19:28.55:290,29,0	1/1:10,0:10:6.02:67,6,0	0/1:14,0:14:0.53:121,0,1	1/1:10,5:15:9.03:146,9,0	1/1:11,0:11:13.80:100,14,0	1/1:6,10:16:21.07:341,21,0	1/1:3,5:9:6.02:97,6,0	1/1:21,0:21:51.11:566,51,0	1/1:29,1:29:35.21:279,35,0	1/1:8,8:16:14.14:410,14,0	1/1:7,6:13:2.81:292,3,0	./.	1/1:8,0:8:5.19:20,5,0	1/1:5,2:7:6.02:97,6,0	1/1:3,3:6:6.02:97,6,0	0/0:19,0:19:48.12:0,48,570	1/1:4,0:4:5.87:36,6,0	1/1:4,8:12:14.55:244,15,0	1/1:7,1:8:8.98:75,9,0
chr10	88796069	.	ATG	A	1002.35	PASS	AB=0.938;AC=16;AF=0.308;AN=52;BaseQRankSum=-0.901;DP=328;FS=1.940;HRun=0;HaplotypeScore=124.0761;InbreedingCoeff=0.2565;MQ=53.84;MQ0=3;MQRankSum=-1.637;QD=6.07;ReadPosRankSum=-4.423;VQSLOD=2.3066;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:17:7.55:8,0,57	0/0:6,0:6:1.49:0,1,7	./.	0/0:15,2:5:8.39:0,8,75	0/1:10,0:10:7.89:25,0,8	0/0:18,0:18:15.08:0,15,103	1/1:5,0:5:11.50:60,11,0	1/1:0,22:22:60.10:794,60,0	0/0:12,0:12:19.79:0,20,72	1/1:20,0:20:24.38:129,24,0	1/1:8,0:8:1.77:4,2,0	0/1:14,0:14:13.05:13,0,45	0/0:8,0:8:11.82:0,12,109	0/1:5,0:5:10.40:10,0,16	0/0:13,0:13:32.65:0,33,312	0/0:8,0:8:12.02:0,12,127	0/1:20,0:20:1.78:2,0,5	0/1:31,0:30:18.52:19,0,173	0/0:12,0:12:35.93:0,36,439	0/0:11,0:11:29.11:0,29,245	./.	0/0:5,0:5:4.69:0,5,17	0/0:6,0:6:14.82:0,15,139	0/0:3,0:3:6.02:0,6,64	0/0:20,0:20:60.19:0,60,1122	0/1:2,1:3:13.02:39,0,13	0/0:13,0:13:29.31:0,29,257	0/1:6,3:8:7.61:58,0,8
chr10	88796071	.	GTA	G	1202.62	PASS	AB=0.931;AC=25;AF=0.481;AN=52;BaseQRankSum=3.348;DP=331;FS=1.240;HRun=0;HaplotypeScore=123.7683;InbreedingCoeff=0.3911;MQ=54.19;MQ0=3;MQRankSum=0.622;QD=5.81;ReadPosRankSum=-0.041;VQSLOD=3.3719;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:19:12.10:142,12,0	1/1:6,0:6:2.68:9,3,0	./.	0/0:18,0:5:8.81:0,9,70	1/1:8,2:10:5.48:62,5,0	0/1:17,2:19:36.62:72,0,37	1/1:3,1:4:9.03:116,9,0	1/1:22,0:22:50.06:344,50,0	1/1:10,1:11:0.82:24,1,0	0/1:16,4:20:2.10:256,0,2	1/1:8,1:9:4.74:16,5,0	0/1:10,3:13:6.41:57,0,6	0/0:8,0:8:12.01:0,12,170	0/1:5,0:5:0:1,0,0	0/0:12,0:12:33.04:0,33,476	0/0:9,0:9:15.04:0,15,213	1/1:20,0:20:22.77:83,23,0	0/1:29,1:29:66.22:139,0,66	0/0:12,0:12:36.10:0,36,575	0/0:12,0:12:30:0,30,386	./.	1/1:3,2:5:2.99:24,3,0	0/0:6,0:6:18.03:0,18,252	0/0:3,0:3:6.02:0,6,100	0/0:21,0:21:63.20:0,63,1038	0/1:3,0:3:20.26:20,0,33	0/0:12,0:12:29.99:0,30,382	0/1:9,0:9:10.42:10,0,39
chr10	88796073	.	A	ATG	2290.45	PASS	AB=1.000;AC=27;AF=0.519;AN=52;BaseQRankSum=2.080;DP=344;FS=3.663;HRun=0;HaplotypeScore=122.7801;InbreedingCoeff=0.5205;MQ=53.74;MQ0=4;MQRankSum=2.215;QD=10.80;ReadPosRankSum=1.773;VQSLOD=3.5865;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:21:35.06:198,35,0	1/1:1,5:6:5.20:64,5,0	./.	0/0:24,0:7:12.02:0,12,123	1/1:10,0:10:10.89:76,11,0	0/1:20,0:20:14.58:103,0,15	0/1:5,0:5:9.64:41,0,10	0/1:23,0:23:33.44:33,0,134	1/1:11,0:11:17.79:70,18,0	1/1:16,4:20:25.43:600,25,0	1/1:2,7:9:6.02:115,6,0	1/1:14,0:14:2.49:67,2,0	0/0:8,0:8:11.98:0,12,115	1/1:5,0:5:7.36:21,7,0	0/0:12,0:12:33.02:0,33,354	0/0:9,0:9:15.01:0,15,167	1/1:1,18:20:48.16:890,48,0	1/1:30,0:29:5.70:125,6,0	0/0:12,0:12:36.06:0,36,426	0/0:12,0:12:33.01:0,33,334	./.	1/1:5,0:5:7.07:36,7,0	0/0:6,0:6:18.03:0,18,224	0/0:3,0:3:5.98:0,6,46	0/0:21,0:21:63.20:0,63,941	0/1:3,0:3:3.01:3,0,15	0/0:12,0:12:30.01:0,30,335	0/1:9,0:8:11.05:36,0,11
chr10	88796150	.	A	AACT	33.63	PASS	AB=0.813;AC=2;AF=0.036;AN=56;BaseQRankSum=3.259;DP=486;FS=2.386;HRun=0;HaplotypeScore=85.0001;InbreedingCoeff=-0.0397;MQ=64.65;MQ0=0;MQRankSum=3.433;QD=2.10;ReadPosRankSum=-0.400;VQSLOD=1.8140;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.26:0,90,1632	0/0:4,0:4:8.84:0,9,168	0/1:6,3:8:97.38:97,0,236	0/1:6,1:6:24.68:25,0,136	0/0:31,0:31:89.84:0,90,1601	0/0:23,0:23:69.17:0,69,1207	0/0:14,0:14:42.14:0,42,783	0/0:25,0:24:72.25:0,72,1325	0/0:15,0:15:45.11:0,45,794	0/0:22,0:22:66.22:0,66,1192	0/0:17,0:17:44.97:0,45,728	0/0:22,0:22:64.43:0,64,1142	0/0:13,0:13:39.12:0,39,693	0/0:9,0:9:27.09:0,27,503	0/0:23,0:23:66.21:0,66,1190	0/0:10,0:10:30.10:0,30,541	0/0:14,0:14:42.14:0,42,761	0/0:22,0:22:66.23:0,66,1230	0/0:16,0:16:48.16:0,48,895	0/0:26,0:26:75.26:0,75,1396	0/0:8,0:8:24.08:0,24,434	0/0:17,0:17:48.08:0,48,823	0/0:18,0:18:54.19:0,54,1005	0/0:6,0:6:18.06:0,18,336	0/0:34,0:34:99:0,102,1882	0/0:17,0:17:51.17:0,51,941	0/0:21,0:20:63.22:0,63,1174	0/0:10,0:10:30.10:0,30,559
chr10	88798486	.	GC	G	3703.63	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-12.169;DP=557;FS=6.668;HRun=9;HaplotypeScore=95.4563;InbreedingCoeff=0.9624;MQ=78.87;MQ0=0;MQRankSum=-1.482;QD=23.29;ReadPosRankSum=2.256;VQSLOD=4.0942;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.16:0,60,681	0/0:1,0:8:19.63:0,20,102	0/0:13,0:13:17.92:0,18,227	0/0:21,0:20:30.43:0,30,284	1/1:6,34:40:96.04:876,96,0	1/1:2,30:32:87.04:796,87,0	1/1:2,18:20:45.02:412,45,0	0/0:11,0:14:14.52:0,15,90	0/0:18,0:18:45.13:0,45,520	0/0:2,0:19:45.73:0,46,241	0/0:3,0:23:57.14:0,57,313	1/1:2,17:19:39.01:357,39,0	0/0:24,0:24:58.70:0,59,264	1/1:0,17:17:48.03:439,48,0	0/0:23,0:23:47.56:0,48,214	0/0:27,0:27:58.76:0,59,264	0/0:1,0:17:39.94:0,40,222	1/1:1,15:16:45.02:412,45,0	0/0:21,0:22:53.13:0,53,245	0/0:30,0:31:81.29:0,81,369	0/0:1,0:3:2.84:0,3,14	1/1:0,15:15:45.02:412,45,0	0/0:28,0:28:71.19:0,71,320	0/0:14,0:14:36.37:0,36,164	0/0:15,0:15:36.11:0,36,415	0/0:7,0:16:28.51:0,29,147	0/0:29,0:29:72.75:0,73,327	0/0:0,0:9:22.73:0,23,115
chr10	88798487	.	C	CT	7636.17	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-13.982;DP=568;FS=7.488;HRun=0;HaplotypeScore=83.0402;InbreedingCoeff=0.7573;MQ=79.51;MQ0=0;MQRankSum=-2.083;QD=28.39;ReadPosRankSum=3.529;VQSLOD=4.8521;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.17:0,69,891	1/1:8,0:8:16.26:59,16,0	0/0:13,0:13:13.20:0,13,330	0/0:22,0:21:47.35:0,47,511	0/0:40,0:40:99:0,108,680	0/0:32,0:31:90.97:0,91,577	0/0:21,0:21:49.69:0,50,320	0/0:16,0:16:34.92:0,35,241	0/0:18,0:18:54.11:0,54,697	0/1:19,0:19:42.48:42,0,55	0/1:24,0:24:35.12:115,0,35	0/0:19,0:19:44.25:0,44,292	1/1:0,24:24:63.21:898,63,0	0/0:19,0:19:47.07:0,47,294	1/1:1,22:25:51.16:726,51,0	1/1:0,26:26:63.21:900,63,0	0/1:18,0:18:9.26:71,0,9	0/0:17,0:17:47.13:0,47,301	1/1:2,20:22:60.88:802,61,0	1/1:1,30:31:93.16:1249,93,0	0/0:3,0:3:5.87:0,6,41	0/0:16,0:16:44.13:0,44,276	1/1:0,28:28:78.26:1105,78,0	1/1:0,15:15:39.13:556,39,0	0/0:14,0:14:42.12:0,42,554	0/0:16,0:16:15.99:0,16,118	1/1:0,29:29:78.26:1113,78,0	0/0:9,0:9:18.32:0,18,85
chr10	88799804	.	G	GA	3598.94	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.344;DP=617;FS=4.615;HRun=5;HaplotypeScore=62.4546;InbreedingCoeff=0.9982;MQ=73.54;MQ0=0;MQRankSum=-1.268;QD=32.72;ReadPosRankSum=-2.267;VQSLOD=3.4143;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,126,1354	0/0:8,0:8:21.05:0,21,225	0/0:23,0:22:60.10:0,60,610	0/0:21,0:21:27.51:0,28,461	0/0:27,0:27:81.20:0,81,870	0/0:18,0:18:51.13:0,51,548	0/0:19,0:19:48.12:0,48,516	1/1:5,30:35:90.29:1184,90,0	0/0:18,0:18:51.10:0,51,538	0/0:23,0:23:69.17:0,69,742	0/0:15,0:15:45.11:0,45,483	0/0:22,0:22:60.15:0,60,644	0/0:29,0:29:75.19:0,75,806	0/0:25,0:25:72.18:0,72,774	0/0:18,0:18:42.09:0,42,443	0/0:24,0:24:66.16:0,66,709	0/0:26,0:26:68.49:0,68,788	0/0:25,0:25:75.19:0,75,805	0/0:14,0:14:39.10:0,39,419	0/0:26,0:26:72.18:0,72,774	1/1:3,34:37:96.31:1263,96,0	0/0:18,0:18:48.12:0,48,516	0/0:14,0:14:39.10:0,39,419	0/0:14,0:13:42.07:0,42,439	0/0:17,0:17:51.13:0,51,548	1/1:3,19:22:27.94:718,28,0	0/0:16,0:16:45.11:0,45,483	1/1:1,15:16:33.11:434,33,0
chr10	88801444	.	TTCTGCG	T	5090.62	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=8.545;DP=387;FS=10.088;HRun=0;HaplotypeScore=91.8025;InbreedingCoeff=0.9076;MQ=75.49;MQ0=0;MQRankSum=-10.567;QD=48.02;ReadPosRankSum=1.540;VQSLOD=3.9133;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:42.14:0,42,1449	0/0:3,0:3:9.03:0,9,323	0/0:15,0:15:42.14:0,42,1372	0/1:13,0:13:3.55:4,0,878	0/0:4,0:4:12.04:0,12,431	0/0:10,0:10:30.10:0,30,1045	0/0:28,0:28:75.26:0,75,2604	0/0:20,0:20:60.20:0,60,1953	0/0:15,0:15:42.13:0,42,1420	0/0:10,0:10:27.09:0,27,909	0/0:8,0:8:24.06:0,24,779	0/0:17,0:17:48.15:0,48,1568	1/1:1,9:10:21.07:505,21,0	0/0:26,0:26:78.27:0,78,2771	1/1:1,13:14:36.12:865,36,0	1/1:0,17:17:51.18:1226,51,0	0/0:18,0:18:51.17:0,51,1669	0/0:20,0:20:57.16:0,57,1770	1/1:2,11:12:30.10:690,30,0	1/1:1,7:8:15.05:361,15,0	0/0:26,0:26:66.21:0,66,2217	0/0:14,0:14:39.13:0,39,1277	1/1:0,11:11:27.09:649,27,0	1/1:2,9:11:9.03:216,9,0	0/0:13,0:13:39.13:0,39,1403	0/0:16,0:16:45.15:0,45,1438	1/1:0,9:9:24.08:577,24,0	0/0:4,0:4:12.04:0,12,432
chr10	88802603	.	GA	G	2083.92	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.225;DP=670;FS=2.534;HRun=8;HaplotypeScore=68.5302;InbreedingCoeff=0.9771;MQ=81.40;MQ0=0;MQRankSum=-0.092;QD=22.90;ReadPosRankSum=-0.699;VQSLOD=3.9479;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1107	0/0:15,0:15:42.13:0,42,507	0/0:25,0:24:41.19:0,41,432	0/0:18,0:18:8.19:0,8,257	0/0:34,0:35:87.13:0,87,1029	0/0:18,1:19:22.17:0,22,539	0/0:21,0:21:59.62:0,60,670	1/1:3,22:25:66.09:632,66,0	0/0:19,0:19:51.16:0,51,616	0/0:28,1:29:52.27:0,52,913	0/0:23,0:23:60.15:0,60,691	0/0:15,0:15:45.14:0,45,544	0/0:24,0:24:66.15:0,66,780	0/0:24,0:24:66.18:0,66,775	0/0:27,0:27:81.25:0,81,979	0/0:27,0:27:75.21:0,75,884	0/0:25,0:25:72.20:0,72,857	0/0:26,0:26:72.19:0,72,840	0/0:22,0:22:54.16:0,54,642	0/0:36,0:36:90.24:0,90,1053	1/1:0,9:9:21.03:203,21,0	0/0:24,0:24:57.16:0,57,668	0/0:16,0:16:30.09:0,30,362	0/0:22,0:21:63.17:0,63,746	0/0:18,1:19:19.17:0,19,505	1/1:3,31:34:35.54:830,36,0	0/0:33,1:34:64.31:0,64,1055	1/1:0,23:23:60.10:579,60,0
chr10	88803409	.	AAGG	A	8634.87	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=17.381;DP=748;FS=15.265;HRun=0;HaplotypeScore=112.5818;InbreedingCoeff=0.9825;MQ=83.98;MQ0=0;MQRankSum=-1.916;QD=40.92;ReadPosRankSum=3.301;VQSLOD=5.4888;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,3185	0/0:10,0:10:30.10:0,30,692	0/0:26,0:26:40.41:0,40,1303	0/0:21,0:21:53.29:0,53,1075	0/0:36,0:36:99:0,108,2487	0/0:31,0:30:93.25:0,93,2090	0/0:27,0:27:81.28:0,81,1850	0/0:32,0:32:84.26:0,84,1786	0/0:17,0:17:48.16:0,48,1107	0/0:30,0:30:90.30:0,90,2007	0/0:25,0:25:75.12:0,75,1659	0/0:24,0:24:72.25:0,72,1660	1/1:2,28:30:78.22:1296,78,0	0/0:28,0:28:75.24:0,75,1648	1/1:0,37:37:84.29:1432,84,0	1/1:1,29:30:6.09:1159,6,0	0/0:18,0:18:54.19:0,54,1242	0/0:13,0:13:39.13:0,39,899	1/1:2,13:15:39.12:635,39,0	1/1:0,29:29:84.06:1261,84,0	0/0:34,0:34:99:0,102,2250	0/0:22,0:22:63.20:0,63,1389	1/1:0,19:19:51.17:870,51,0	1/1:0,33:33:72.18:1195,72,0	0/0:30,0:30:90.29:0,90,1985	0/0:45,0:45:99:0,129,2793	1/1:0,18:18:48.12:787,48,0	0/0:18,0:18:54.19:0,54,1244
chr10	88805327	.	AT	A	1969.90	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.848;DP=626;FS=0.929;HRun=9;HaplotypeScore=69.2560;InbreedingCoeff=0.9947;MQ=76.91;MQ0=0;MQRankSum=-2.650;QD=21.18;ReadPosRankSum=0.891;VQSLOD=4.4140;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.23:0,78,898	1/1:1,12:13:27.01:247,27,0	0/0:22,0:22:30.56:0,31,341	0/0:10,0:10:20.56:0,21,240	0/0:31,1:32:65.76:0,66,987	0/0:22,0:22:54.12:0,54,608	0/0:12,0:12:30.09:0,30,346	0/0:31,0:31:76.24:0,76,471	0/0:25,0:25:75.21:0,75,856	1/1:2,25:27:75.04:686,75,0	1/1:4,18:22:54.02:494,54,0	0/0:24,0:24:66.20:0,66,759	0/0:23,0:23:63.19:0,63,727	0/0:25,0:25:69.20:0,69,796	0/0:21,0:21:60.18:0,60,693	0/0:21,0:21:63.16:0,63,708	1/1:5,26:31:69.60:703,70,0	0/0:37,0:37:99:0,105,1205	0/0:17,0:17:45.13:0,45,518	0/0:17,0:17:48.14:0,48,553	0/0:16,0:16:47.28:0,47,303	0/0:15,0:15:45.13:0,45,519	0/0:29,0:29:81.23:0,81,925	0/0:8,0:8:24.07:0,24,277	0/0:31,0:31:90.25:0,90,1020	0/0:26,2:28:24.16:0,24,377	0/0:30,0:28:84.19:0,84,943	0/0:8,0:8:17.81:0,18,120
chr10	88805747	.	G	GA	33852.51	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-9.918;DP=814;FS=1.953;HRun=0;HaplotypeScore=70.5538;InbreedingCoeff=0.9999;MQ=83.72;MQ0=0;MQRankSum=-11.020;QD=44.14;ReadPosRankSum=5.971;VQSLOD=4.7627;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,49:50:99:2159,135,0	1/1:2,22:24:63.01:1007,63,0	0/0:27,0:27:78.22:0,78,1028	0/0:20,0:20:51.15:0,51,657	1/1:1,32:33:90.31:1439,90,0	1/1:1,26:27:72.25:1151,72,0	1/1:1,31:32:84.29:1343,84,0	1/1:0,37:37:99:1776,111,0	1/1:0,28:28:78.27:1247,78,0	1/1:0,24:24:72.22:1127,72,0	1/1:1,25:26:72.25:1151,72,0	1/1:1,37:38:99:1631,102,0	1/1:1,27:28:72.24:1150,72,0	1/1:0,26:26:78.27:1247,78,0	1/1:0,35:35:96.33:1533,96,0	1/1:0,32:32:90.31:1439,90,0	1/1:1,34:35:96.33:1535,96,0	1/1:0,32:32:84.29:1343,84,0	1/1:0,27:27:81.26:1265,81,0	1/1:1,29:30:78.27:1247,78,0	1/1:1,48:49:99:2111,132,0	1/1:2,23:25:66.22:1055,66,0	1/1:0,17:17:51.17:815,51,0	1/1:1,25:25:72.25:1151,72,0	1/1:0,22:22:63.21:1007,63,0	1/1:0,23:23:69.24:1101,69,0	1/1:0,30:30:80.98:1295,81,0	1/1:0,11:11:33.11:527,33,0
chr10	88806720	.	AC	A	21604.69	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=5.589;DP=609;FS=14.455;HRun=1;HaplotypeScore=75.0369;InbreedingCoeff=0.9997;MQ=91.94;MQ0=0;MQRankSum=-11.170;QD=38.93;ReadPosRankSum=6.478;VQSLOD=3.5778;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:75.25:1048,75,0	1/1:0,12:12:33.11:461,33,0	0/0:26,0:26:75.22:0,75,1149	0/0:28,0:27:72:0,72,999	1/1:0,19:19:54.10:712,54,0	1/1:0,13:13:39.13:545,39,0	1/1:0,23:23:69.23:965,69,0	1/1:0,15:15:45.14:612,45,0	1/1:0,29:29:78.26:1090,78,0	1/1:0,23:23:69.20:944,69,0	1/1:0,24:24:69.23:964,69,0	1/1:0,30:30:87.29:1216,87,0	1/1:0,31:31:84.28:1174,84,0	1/1:0,29:29:84.28:1174,84,0	1/1:0,27:27:81.27:1133,81,0	1/1:0,16:16:42.14:587,42,0	1/1:0,13:13:39.13:545,39,0	1/1:0,17:17:45.15:628,45,0	1/1:0,15:15:42.08:547,42,0	1/1:0,18:18:54.18:755,54,0	1/1:0,20:20:54.18:755,54,0	1/1:0,14:14:39.13:534,39,0	1/1:0,17:17:48.16:670,48,0	1/1:0,16:16:42.14:587,42,0	1/1:0,20:20:54.18:754,54,0	1/1:0,24:24:72.22:988,72,0	1/1:0,40:40:99:1632,117,0	1/1:0,19:19:42.14:584,42,0
chr10	88806861	.	T	TGG	6935.96	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-3.171;DP=462;FS=28.900;HRun=2;HaplotypeScore=110.1961;InbreedingCoeff=0.6921;MQ=56.35;MQ0=6;MQRankSum=-0.869;QD=16.47;ReadPosRankSum=3.577;VQSLOD=0.8189;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:46.40:350,46,0	1/1:6,0:6:15.44:127,15,0	0/0:12,0:9:26.10:0,26,210	0/0:18,0:12:30.47:0,30,297	1/1:20,0:20:20.98:178,21,0	1/1:24,0:24:65.76:535,66,0	1/1:16,0:16:40.61:295,41,0	1/1:18,0:17:44.95:393,45,0	1/1:14,0:14:12.46:231,12,0	1/1:3,14:17:17.92:272,18,0	1/1:13,0:12:26.49:218,26,0	1/1:18,0:18:43.94:347,44,0	1/1:20,0:20:36.55:291,37,0	1/1:18,0:18:41.59:287,42,0	1/1:15,0:15:41.27:282,41,0	1/1:15,0:15:39.36:282,39,0	1/1:11,0:9:24.94:186,25,0	1/1:7,0:7:20.44:153,20,0	0/1:13,0:13:12.96:126,0,13	1/1:13,0:13:27.52:185,28,0	1/1:1,14:14:3.01:56,3,0	1/1:17,0:17:46.62:376,47,0	1/1:17,0:16:8:264,8,0	1/1:26,0:26:26.48:305,26,0	1/1:18,0:18:43.97:363,44,0	1/1:19,0:19:36.05:295,36,0	1/1:29,0:30:72.65:538,73,0	0/0:1,10:11:2.22:0,2,7
chr10	88806862	.	GGAGA	G	1123.73	PASS	AB=0.992;AC=30;AF=0.625;AN=48;BaseQRankSum=4.214;DP=465;FS=7.240;HRun=0;HaplotypeScore=144.3511;InbreedingCoeff=0.3279;MQ=56.00;MQ0=6;MQRankSum=-3.394;QD=4.12;ReadPosRankSum=0.298;VQSLOD=1.8009;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:5.90:56,6,0	1/1:6,0:6:2.99:24,3,0	./.	0/0:18,0:12:0:0,0,0	./.	./.	1/1:16,0:16:12.01:111,12,0	./.	1/1:13,0:14:6.01:56,6,0	0/0:16,0:16:18.51:0,19,264	0/0:13,0:13:0.47:0,0,1	1/1:18,0:18:9.01:84,9,0	1/1:16,4:20:3.81:98,4,0	1/1:18,0:18:15.02:139,15,0	1/1:15,0:15:10.35:128,10,0	1/1:14,0:14:9.70:100,10,0	1/1:11,0:9:3.88:26,4,0	1/1:7,0:7:3:28,3,0	0/1:14,0:14:16.51:17,0,135	1/1:13,0:14:6.70:82,7,0	0/0:16,0:15:3.01:0,3,54	0/0:18,0:18:2.99:0,3,24	0/1:17,0:16:10.53:11,0,160	0/0:25,0:25:26.81:0,27,435	1/1:19,0:19:1.55:4,2,0	0/1:19,0:20:3.51:166,0,4	0/1:28,1:30:2.46:136,0,2	0/0:11,0:11:3.01:0,3,59
chr10	88808282	.	GA	G	3794.49	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.069;DP=523;FS=2.730;HRun=7;HaplotypeScore=50.4042;InbreedingCoeff=0.9940;MQ=74.66;MQ0=0;MQRankSum=0.702;QD=27.90;ReadPosRankSum=1.183;VQSLOD=4.3507;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.21:0,78,963	0/0:8,0:8:24.08:0,24,302	0/0:18,1:19:17.30:0,17,451	0/0:7,0:7:18.05:0,18,226	1/1:2,30:32:87.19:887,87,0	1/1:0,21:21:60.14:612,60,0	1/1:0,11:11:33.08:337,33,0	0/0:19,0:19:54.16:0,54,668	0/0:16,0:16:48.14:0,48,588	0/0:24,0:24:69.22:0,69,868	0/0:35,0:35:96.31:0,96,1208	1/1:2,14:16:39.09:398,39,0	0/0:13,0:13:36.12:0,36,453	1/1:1,23:24:66.15:673,66,0	0/0:20,0:20:60.18:0,60,742	0/0:18,0:18:48.12:0,48,587	0/0:30,0:30:72.23:0,72,905	1/1:0,18:18:51.12:520,51,0	0/0:12,0:12:36.12:0,36,453	0/0:14,0:14:39.12:0,39,491	0/0:8,0:8:21.07:0,21,264	1/1:1,13:14:36.08:367,36,0	0/0:12,0:12:36.11:0,36,450	0/0:10,0:10:30.10:0,30,377	0/0:34,0:34:96.28:0,96,1182	0/0:31,0:31:84.27:0,84,1056	0/0:24,0:24:72.23:0,72,906	0/0:6,0:6:18.06:0,18,226
chr10	88808529	.	A	AG	16231.16	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-12.893;DP=500;FS=8.581;HRun=0;HaplotypeScore=41.7457;InbreedingCoeff=0.9867;MQ=87.85;MQ0=0;MQRankSum=-4.295;QD=41.09;ReadPosRankSum=6.029;VQSLOD=4.2868;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:60.20:910,60,0	1/1:0,4:4:9.03:138,9,0	0/0:22,0:22:45.99:0,46,781	0/0:12,0:12:33.09:0,33,427	1/1:0,27:27:75.05:1054,75,0	1/1:0,23:23:60.20:918,60,0	1/1:0,12:12:30.10:459,30,0	0/0:30,0:30:84.27:0,84,1160	1/1:0,18:18:48.16:735,48,0	1/1:0,13:13:39.12:575,39,0	1/1:0,22:22:63.21:964,63,0	1/1:1,12:13:33.11:505,33,0	1/1:1,17:18:48.16:735,48,0	1/1:0,19:19:54.18:826,54,0	1/1:0,19:19:51.17:781,51,0	1/1:0,21:21:63.21:964,63,0	1/1:0,18:18:42.14:643,42,0	1/1:1,21:22:54.18:818,54,0	1/1:1,18:19:54.17:802,54,0	1/1:0,28:28:75.25:1146,75,0	0/0:10,0:10:30.10:0,30,415	1/1:0,11:11:24.08:367,24,0	1/1:0,14:14:42.14:642,42,0	1/1:0,8:8:24.08:367,24,0	1/1:0,17:17:42.14:643,42,0	0/0:23,0:23:69.22:0,69,950	1/1:0,29:28:81.28:1239,81,0	0/0:8,0:8:24.08:0,24,335
chr10	88808789	.	AT	A	19884.22	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=15.360;DP=652;FS=4.359;HRun=1;HaplotypeScore=123.0926;InbreedingCoeff=0.9965;MQ=82.54;MQ0=0;MQRankSum=-4.169;QD=38.24;ReadPosRankSum=7.136;VQSLOD=3.9307;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:78.26:1091,78,0	1/1:0,10:10:27.06:377,27,0	0/0:22,0:22:66.22:0,66,1031	0/0:13,0:13:35.79:0,36,536	1/1:0,38:38:99:1472,108,0	1/1:0,29:29:72.13:961,72,0	1/1:0,21:21:60.16:817,60,0	0/0:34,0:34:99:0,102,1583	1/1:0,30:30:87.29:1217,87,0	1/1:0,20:20:57.18:773,57,0	1/1:0,23:23:63.21:873,63,0	1/1:0,20:20:57.19:797,57,0	1/1:0,22:22:63.21:881,63,0	1/1:0,20:20:54.18:755,54,0	1/1:0,27:27:66.22:923,66,0	1/1:0,16:16:42.14:587,42,0	1/1:0,30:30:87.28:1211,87,0	1/1:0,28:28:75.25:1038,75,0	1/1:0,14:14:39.09:508,39,0	1/1:0,34:34:99:1377,99,0	0/0:22,0:22:60.20:0,60,956	1/1:0,15:15:42.14:587,42,0	1/1:0,29:29:84.28:1164,84,0	1/1:0,6:6:15.05:210,15,0	1/1:0,33:33:84.28:1175,84,0	0/0:25,0:25:75.25:0,75,1176	1/1:0,29:29:78.26:1090,78,0	0/0:16,0:16:44.82:0,45,712
chr10	88811164	.	TC	T	6192.71	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.659;DP=714;FS=4.937;HRun=2;HaplotypeScore=68.4328;InbreedingCoeff=0.9999;MQ=81.65;MQ0=0;MQRankSum=-3.044;QD=36.21;ReadPosRankSum=2.411;VQSLOD=5.5682;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.31:0,96,1415	0/0:10,0:10:30.09:0,30,430	0/0:28,0:28:81.26:0,81,1188	0/0:18,0:18:48.12:0,48,660	1/1:0,20:20:60.20:779,60,0	1/1:0,34:34:93.30:1207,93,0	1/1:0,24:24:63.20:818,63,0	0/0:28,0:28:75.25:0,75,1106	0/0:22,0:22:66.22:0,66,989	0/0:27,0:27:81.18:0,81,1151	0/0:27,0:27:81.26:0,81,1185	1/1:0,27:27:78.25:1013,78,0	0/0:30,0:30:84.27:0,84,1238	1/1:0,29:29:81.26:1052,81,0	0/0:35,0:35:99:0,105,1545	0/0:34,0:34:99:0,102,1524	0/0:23,0:23:69.23:0,69,1034	1/1:1,14:15:39.13:506,39,0	0/0:20,0:20:60.17:0,60,835	0/0:31,0:31:93.32:0,93,1393	0/0:28,0:28:84.26:0,84,1235	1/1:0,22:22:63.20:818,63,0	0/0:32,0:32:87.29:0,87,1301	0/0:23,0:23:69.23:0,69,1030	0/0:21,0:21:63.20:0,63,918	0/0:30,0:30:90.30:0,90,1349	0/0:28,0:28:84.22:0,84,1231	0/0:15,0:15:45.15:0,45,674
chr10	88811423	.	AGTT	A	16071.35	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-8.987;DP=622;FS=12.065;HRun=0;HaplotypeScore=105.0624;InbreedingCoeff=0.9998;MQ=65.45;MQ0=2;MQRankSum=-1.203;QD=41.42;ReadPosRankSum=4.723;VQSLOD=5.6238;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:27:72.25:1228,72,0	1/1:0,17:17:51.17:870,51,0	0/0:18,0:14:39.13:0,39,878	0/0:23,0:23:50.47:0,50,1301	0/0:28,0:28:84.25:0,84,1871	0/0:29,0:29:87.26:0,87,1916	0/0:16,0:16:48.16:0,48,1106	1/1:0,23:20:60.21:1015,60,0	1/1:1,14:13:36.12:614,36,0	1/1:1,22:23:66.23:1111,66,0	1/1:0,15:15:39.13:651,39,0	0/0:37,0:37:99:0,108,2396	1/1:4,21:24:54.18:916,54,0	0/0:24,0:24:72.23:0,72,1616	1/1:1,26:26:54.18:921,54,0	1/1:3,19:21:48.16:818,48,0	1/1:2,26:26:66.23:1126,66,0	0/0:17,0:17:51.14:0,51,1102	1/1:3,12:15:36.11:590,36,0	1/1:1,13:14:39.13:665,39,0	1/1:0,17:14:33.11:563,33,0	0/0:19,0:19:54.19:0,54,1243	1/1:3,26:29:66.23:1125,66,0	1/1:2,22:20:48.16:818,48,0	0/0:23,0:23:66.23:0,66,1521	1/1:0,26:25:75.25:1250,75,0	1/1:0,28:27:74.92:1278,75,0	1/1:0,12:12:30.10:511,30,0
chr10	88812287	.	TA	T	7641.40	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=13.530;DP=586;FS=2.264;HRun=7;HaplotypeScore=58.2167;InbreedingCoeff=0.9946;MQ=73.19;MQ0=0;MQRankSum=0.147;QD=25.47;ReadPosRankSum=4.074;VQSLOD=5.4633;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:24:51.11:520,51,0	1/1:0,7:7:15.03:153,15,0	0/0:10,0:10:26.95:0,27,284	0/0:9,0:9:14.06:0,14,240	0/0:27,0:27:54.16:0,54,662	0/0:27,0:27:81.26:0,81,1017	0/0:15,0:15:36.12:0,36,453	0/0:34,0:34:87.27:0,87,1083	1/1:1,14:15:39.05:387,39,0	1/1:1,20:21:60.13:606,60,0	1/1:2,22:24:54.12:551,54,0	0/0:18,0:18:51.10:0,51,598	1/1:1,23:24:66.15:673,66,0	0/0:13,0:13:39.12:0,39,491	1/1:2,24:26:66.15:673,66,0	1/1:5,22:27:66.15:673,66,0	1/1:3,12:15:30.07:306,30,0	0/0:30,0:30:81.26:0,81,1019	1/1:0,26:26:78.12:773,78,0	1/1:1,19:20:54.12:551,54,0	0/0:16,0:16:45.14:0,45,565	0/0:18,0:18:45.14:0,45,564	1/1:5,22:27:51.11:520,51,0	1/1:0,9:9:27.06:275,27,0	0/0:28,0:28:75.13:0,75,867	0/0:30,2:32:33.46:0,33,964	1/1:2,33:35:96.22:979,96,0	0/0:9,0:9:27.09:0,27,340
chr10	88815120	.	CATATATATATATATATATATATATATATATATATATATAT	C	2869.72	PASS	AB=0.878;AC=7;AF=0.159;AN=44;BaseQRankSum=4.196;DP=187;FS=11.358;HRun=0;HaplotypeScore=179.9338;InbreedingCoeff=0.1544;MQ=77.04;MQ0=1;MQRankSum=-3.091;QD=41.59;ReadPosRankSum=2.919;VQSLOD=2.0442;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:3.01:0,3,123	0/0:4,0:4:3.01:0,3,134	0/0:6,0:5:2.60:0,3,10	0/0:12,0:8:14.04:0,14,138	./.	./.	./.	1/1:13,0:13:3.01:81,3,0	0/0:7,0:7:9.03:0,9,275	0/1:8,0:9:59.67:60,0,598	0/0:6,0:8:14.63:0,15,509	0/0:5,0:5:9:0,9,146	./.	0/0:2,0:2:3.01:0,3,117	./.	./.	0/1:13,0:14:99:103,0,413	0/0:4,0:4:9.03:0,9,1228	0/0:7,0:7:6.02:0,6,375	0/0:9,0:9:6.01:0,6,69	0/0:5,0:5:0.47:0,0,1	0/0:6,0:6:3.01:0,3,94	0/0:9,0:9:5.28:0,5,48	0/0:3,0:3:3.01:0,3,520	0/0:4,0:5:12.04:0,12,496	0/1:12,3:16:98.62:937,0,99	0/0:7,0:7:6.02:0,6,133	1/1:10,7:17:18.06:1807,18,0
chr10	88816238	.	AACACACAC	A	3038.99	PASS	AB=0.784;AC=22;AF=0.423;AN=52;BaseQRankSum=7.775;DP=597;FS=6.883;HRun=0;HaplotypeScore=157.5753;InbreedingCoeff=0.6303;MQ=68.38;MQ0=14;MQRankSum=-9.527;QD=12.11;ReadPosRankSum=-0.844;VQSLOD=2.2603;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:29:4.74:126,5,0	0/1:11,2:13:58.57:73,0,59	./.	./.	1/1:12,11:24:14.98:249,15,0	1/1:20,12:33:24.08:543,24,0	1/1:6,4:10:9.03:223,9,0	0/0:22,0:20:27.86:0,28,560	1/1:10,0:22:26.93:398,27,0	0/1:13,0:21:32.13:32,0,88	0/1:6,0:11:14.56:15,0,34	1/1:17,10:29:18.04:467,18,0	0/0:21,0:21:39.13:0,39,1313	1/1:10,8:19:27.09:535,27,0	0/0:26,0:31:48.15:0,48,1450	0/0:28,0:29:51.17:0,51,1637	0/1:10,0:12:0.85:23,0,1	0/0:11,0:11:3.01:0,3,50	0/0:7,0:7:9.92:0,10,207	0/0:27,0:29:39.10:0,39,1093	0/0:18,0:17:18.04:0,18,501	1/1:8,7:15:15.05:343,15,0	0/0:18,0:18:27.09:0,27,788	0/0:25,0:26:39.13:0,39,1273	1/1:5,5:12:9.03:206,9,0	0/0:20,0:20:33.11:0,33,1176	0/0:13,0:15:25.33:0,25,673	0/0:12,0:12:6.02:0,6,200
chr10	88816269	.	A	ACACA	596.32	PASS	AB=1.000;AC=12;AF=0.231;AN=52;BaseQRankSum=-4.789;DP=640;FS=3.392;HRun=0;HaplotypeScore=144.1365;InbreedingCoeff=0.5330;MQ=51.89;MQ0=18;MQRankSum=0.330;QD=3.64;ReadPosRankSum=-5.854;VQSLOD=0.0554;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:8.80:0,9,79	0/0:11,0:11:3.89:0,4,30	./.	./.	0/0:21,0:21:4.25:0,4,32	0/0:27,0:27:16.57:0,17,144	0/0:17,0:17:7.56:0,8,60	1/1:33,0:29:12.31:84,12,0	0/0:19,0:19:18.02:0,18,167	0/0:21,0:21:11.91:0,12,106	0/0:13,0:13:2.98:0,3,21	0/0:26,0:26:16.18:0,16,144	0/0:28,0:28:24.03:0,24,309	0/0:16,0:16:15.12:0,15,120	0/0:26,0:26:33.07:0,33,417	0/0:32,0:32:33.07:0,33,431	0/0:18,0:18:9.01:0,9,84	0/1:18,0:18:21.87:31,0,22	1/1:15,0:15:1.81:5,2,0	0/1:26,0:26:5.11:5,0,154	1/1:28,0:26:15.05:237,15,0	0/0:20,0:20:8.94:0,9,63	0/0:17,0:17:11.91:0,12,163	0/0:26,0:26:20.90:0,21,264	0/0:15,0:14:8.83:0,9,83	1/1:20,0:20:24.87:314,25,0	0/0:24,0:24:5.11:0,5,53	1/1:18,5:22:3.01:69,3,0
chr10	88817488	.	G	GCTGCTGCCAGCC	352.82	PASS	AB=0.826;AC=8;AF=0.167;AN=48;BaseQRankSum=0.503;DP=453;FS=17.082;HRun=0;HaplotypeScore=85.0520;InbreedingCoeff=0.5569;MQ=38.55;MQ0=74;MQRankSum=-1.641;QD=5.51;ReadPosRankSum=-2.098;VQSLOD=0.1241;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:10:6.02:0,6,211	0/0:13,0:12:11.99:0,12,334	0/0:11,0:1:2.74:0,3,12	./.	0/1:5,0:5:0:0,0,0	./.	./.	0/0:18,0:11:24.05:0,24,429	0/0:7,0:6:5.76:0,6,211	0/0:23,0:18:30.05:0,30,646	./.	0/1:7,7:10:0:0,0,0	0/0:9,0:7:6.02:0,6,211	1/1:15,0:12:6.02:117,6,0	0/0:15,0:14:24.08:0,24,785	0/0:8,0:7:11.77:0,12,422	0/0:37,0:31:39.13:0,39,1249	1/1:18,0:10:15:276,15,0	0/0:9,0:4:11.87:0,12,201	0/0:11,0:11:6.28:0,6,253	0/0:82,0:63:53.54:0,54,1354	1/1:8,0:8:3.01:74,3,0	0/0:4,0:3:2.06:0,2,56	0/0:46,0:41:51.17:0,51,1700	0/0:6,0:6:10.28:0,10,320	0/0:15,0:11:24.07:0,24,591	0/0:6,0:6:6.02:0,6,212	0/0:7,0:6:6.02:0,6,211
chr10	88820792	.	A	AT	8801.24	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-10.185;DP=594;FS=1.417;HRun=8;HaplotypeScore=54.3899;InbreedingCoeff=0.9855;MQ=58.44;MQ0=0;MQRankSum=0.373;QD=28.58;ReadPosRankSum=2.343;VQSLOD=5.2364;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:60.18:692,60,0	1/1:0,9:9:27.08:312,27,0	0/0:5,0:5:11.22:0,11,87	0/0:5,0:5:8.99:0,9,80	0/0:33,0:33:93.05:0,93,851	0/0:28,0:28:74.98:0,75,677	0/0:9,0:9:20.97:0,21,181	0/0:39,0:39:96.03:0,96,876	1/1:2,13:15:39.12:450,39,0	1/1:7,31:38:93.26:1063,93,0	1/1:5,24:29:20.31:741,20,0	0/0:21,0:21:60.03:0,60,549	1/1:3,22:25:57.17:658,57,0	0/0:18,0:18:51.03:0,51,466	1/1:3,14:17:39.12:450,39,0	1/1:1,13:14:39.12:450,39,0	1/1:1,24:25:69.21:796,69,0	0/0:19,0:19:53.67:0,54,486	1/1:5,11:16:33.10:381,33,0	1/1:3,26:29:75.14:836,75,0	0/0:12,0:12:30.02:0,30,275	0/0:18,0:18:45.01:0,45,412	1/1:2,23:25:60.18:692,60,0	1/1:0,17:17:45.13:519,45,0	0/0:33,0:33:90.03:0,90,820	0/0:29,0:29:75.04:0,75,686	1/1:2,23:25:66.20:761,66,0	0/0:17,0:17:51.03:0,51,467
chr10	88821105	.	CA	C	1021.26	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.258;DP=844;FS=4.423;HRun=4;HaplotypeScore=77.1678;InbreedingCoeff=1.0000;MQ=75.52;MQ0=0;MQRankSum=-2.918;QD=29.18;ReadPosRankSum=1.081;VQSLOD=3.7631;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,1840	0/0:14,0:14:42.13:0,42,571	0/0:37,0:37:90.28:0,90,1208	0/0:22,0:22:66.21:0,66,899	0/0:33,0:33:87.29:0,87,1214	0/0:34,0:34:99:0,99,1369	0/0:30,0:30:87.29:0,87,1217	0/0:33,0:33:90.27:0,90,1199	0/0:27,0:27:81.27:0,81,1131	0/0:32,0:32:90.29:0,90,1233	0/0:28,0:28:84.25:0,84,1142	0/0:25,0:25:72.23:0,72,990	0/0:37,0:37:99:0,111,1532	0/0:26,0:26:69.23:0,69,965	0/0:48,0:48:99:0,138,1932	0/0:37,0:37:99:0,108,1478	0/0:23,0:23:69.23:0,69,964	0/0:17,0:17:51.13:0,51,692	0/0:29,0:29:81.26:0,81,1118	0/0:36,0:36:99:0,102,1395	0/0:36,0:36:99:0,99,1360	0/0:31,0:31:87.29:0,87,1218	0/0:21,0:21:60.20:0,60,827	0/0:35,0:35:99:0,99,1386	1/1:3,32:35:93.28:1116,93,0	0/0:23,0:23:66.22:0,66,924	0/0:27,0:27:78.26:0,78,1091	0/0:21,0:21:63.21:0,63,881
chr10	88822727	.	G	GAATACTGT	8990.78	PASS	AB=0.604;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.454;DP=575;FS=4.840;HRun=0;HaplotypeScore=136.9056;InbreedingCoeff=0.8892;MQ=63.24;MQ0=0;MQRankSum=-12.434;QD=103.34;ReadPosRankSum=-2.049;VQSLOD=5.0939;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39.09:0,39,1053	0/0:16,0:16:45.15:0,45,1213	0/0:9,0:9:27.09:0,27,711	0/0:6,0:6:14.41:0,14,271	0/0:29,0:29:87.30:0,87,2460	0/0:19,0:19:54.16:0,54,1377	0/0:6,0:6:12.04:0,12,342	1/1:21,8:32:93.32:3307,93,0	0/0:18,0:18:54.19:0,54,1523	0/0:17,0:17:51.18:0,51,1408	0/0:25,0:25:75.26:0,75,2097	0/0:23,0:23:69.21:0,69,1816	0/0:22,0:22:66.23:0,66,1853	0/0:19,0:19:54.19:0,54,1480	0/0:21,0:21:60.18:0,60,1652	0/0:22,0:22:66.21:0,66,1824	0/0:21,0:21:63.22:0,63,1686	0/0:27,0:27:78.27:0,78,2218	0/0:15,0:15:42.13:0,42,1145	0/0:29,0:29:87.28:0,87,2433	1/1:6,4:10:18.06:693,18,0	0/0:28,0:28:84.27:0,84,2268	0/0:25,0:25:72.25:0,72,2036	0/0:11,0:11:27.09:0,27,772	0/0:34,0:34:93.30:0,93,2554	0/1:10,19:29:1.84:3300,0,2	0/0:32,0:32:90.31:0,90,2544	1/1:7,9:16:42.14:1691,42,0
chr10	88822780	.	T	TC	3602.31	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-0.533;DP=595;FS=8.153;HRun=1;HaplotypeScore=61.0190;InbreedingCoeff=0.9669;MQ=78.75;MQ0=0;MQRankSum=-0.885;QD=37.52;ReadPosRankSum=-3.104;VQSLOD=2.4049;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.19:0,60,774	0/0:14,0:14:42.12:0,42,531	0/0:20,0:20:37.26:0,37,527	0/0:9,0:9:27.06:0,27,325	0/0:29,0:29:81.19:0,81,1003	0/0:23,0:23:69.22:0,69,895	0/0:11,0:11:33.11:0,33,429	1/1:0,41:41:99:1822,123,0	0/0:21,0:21:57.19:0,57,740	0/0:21,0:21:63.20:0,63,818	0/0:30,0:30:90.28:0,90,1148	0/0:23,0:23:66.21:0,66,857	0/0:28,0:28:78.23:0,78,996	0/0:15,0:15:45.15:0,45,584	0/0:15,0:15:45.15:0,45,584	0/0:25,0:25:75.23:0,75,959	0/0:24,0:24:69.17:0,69,861	0/0:25,0:25:75.24:0,75,974	0/0:16,0:16:45.13:0,45,560	0/0:30,0:30:90.28:0,90,1155	1/1:0,15:15:36.12:539,36,0	0/0:14,0:14:42.14:0,42,545	0/0:20,0:20:57.19:0,57,740	0/0:5,0:5:15.05:0,15,195	0/0:25,0:25:72.23:0,72,934	1/1:3,15:18:6.31:568,6,0	0/0:33,0:33:99:0,99,1270	1/1:1,21:22:45.15:673,45,0
chr10	88823246	.	TTAAA	T	3190.85	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.324;DP=602;FS=3.729;HRun=0;HaplotypeScore=135.3345;InbreedingCoeff=0.9414;MQ=79.91;MQ0=0;MQRankSum=-8.876;QD=38.91;ReadPosRankSum=0.025;VQSLOD=3.7678;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:67,0:67:99:0,196,5106	0/0:13,0:13:33.11:0,33,855	0/0:23,0:23:61.76:0,62,1580	0/0:22,0:22:63.22:0,63,1487	0/0:26,0:26:69.24:0,69,1840	0/0:20,0:20:57.20:0,57,1487	0/0:25,0:25:72.25:0,72,1823	1/1:4,23:27:69.14:1115,69,0	0/0:19,0:19:57.20:0,57,1512	0/0:18,0:18:54.19:0,54,1410	0/0:22,0:22:60.19:0,60,1537	0/0:19,0:19:57.20:0,57,1514	0/0:20,0:20:57.20:0,57,1499	0/0:20,0:20:60.21:0,60,1536	0/0:21,0:21:57.20:0,57,1511	0/0:12,0:12:30.10:0,30,769	0/0:24,0:24:69.22:0,69,1774	0/0:18,0:18:42.14:0,42,1075	0/0:11,0:11:33.11:0,33,848	0/0:22,0:22:57.20:0,57,1520	1/1:4,16:20:39.09:692,39,0	0/0:18,0:18:51.18:0,51,1358	0/0:18,0:18:48.16:0,48,1247	0/0:20,0:20:60.21:0,60,1528	0/0:17,0:17:48.16:0,48,1272	1/1:6,26:32:4.27:1364,4,0	0/0:25,0:24:72.25:0,72,1848	1/1:0,3:3:9.03:168,9,0
chr10	88823435	.	G	GA	3894.30	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.800;DP=682;FS=0.844;HRun=1;HaplotypeScore=71.9524;InbreedingCoeff=0.9976;MQ=78.02;MQ0=0;MQRankSum=-1.405;QD=38.18;ReadPosRankSum=-1.459;VQSLOD=3.5810;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,1394	0/0:6,0:6:18.05:0,18,219	0/0:26,0:25:69.11:0,69,837	0/0:26,0:26:65.25:0,65,847	0/0:30,0:30:90.24:0,90,1106	0/0:23,0:23:66.21:0,66,855	0/0:22,0:22:63.18:0,63,790	1/1:2,22:24:66.18:901,66,0	0/0:27,0:27:78.22:0,78,970	0/0:31,0:31:75.24:0,75,973	0/0:20,0:20:57.11:0,57,663	0/0:20,0:20:57.16:0,57,712	0/0:22,0:22:66.15:0,66,796	0/0:26,0:26:75.23:0,75,947	0/0:28,0:28:84.24:0,84,1059	0/0:21,0:21:63.15:0,63,761	0/0:21,0:21:63.20:0,63,816	0/0:14,0:14:36.12:0,36,467	0/0:28,0:28:78.20:0,78,955	0/0:26,0:26:72.19:0,72,898	1/1:2,28:32:84.23:1198,84,0	0/0:21,0:21:63.19:0,63,792	0/0:30,0:30:90.24:0,90,1108	0/0:22,0:22:66.17:0,66,812	0/0:20,0:20:60.17:0,60,746	1/1:1,33:34:99:1352,99,0	0/0:30,0:29:90.26:0,90,1125	1/1:1,11:12:30.10:444,30,0
chr10	88824416	.	T	TA	8121.70	PASS	AB=0.804;AC=50;AF=0.893;AN=56;BaseQRankSum=-3.380;DP=502;FS=14.008;HRun=10;HaplotypeScore=69.9158;InbreedingCoeff=0.6555;MQ=70.14;MQ0=0;MQRankSum=-2.181;QD=17.50;ReadPosRankSum=0.949;VQSLOD=4.2648;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:19:41.05:203,41,0	1/1:2,0:12:28.64:152,29,0	0/0:15,0:15:20.93:0,21,168	0/1:15,0:12:12.85:13,0,76	1/1:9,21:30:32.50:550,32,0	1/1:4,13:17:42.09:440,42,0	1/1:3,14:17:33.08:352,33,0	1/1:11,1:24:40.64:230,41,0	1/1:2,0:13:25.57:128,26,0	1/1:7,0:20:34.01:177,34,0	1/1:8,0:22:41.02:217,41,0	1/1:3,15:18:42.11:447,42,0	1/1:5,18:23:42.10:448,42,0	1/1:3,14:17:42.11:448,42,0	1/1:0,14:14:36.09:384,36,0	1/1:6,15:22:20.31:406,20,0	0/1:5,0:14:0.23:63,0,0	1/1:2,14:16:42.11:448,42,0	1/1:4,28:33:84.07:872,84,0	1/1:2,14:16:39.06:404,39,0	1/1:1,0:5:11.40:57,11,0	1/1:0,2:2:6.02:64,6,0	1/1:3,10:14:29.91:302,30,0	1/1:0,4:4:12.03:128,12,0	0/0:22,1:22:27.94:0,28,436	1/1:4,1:27:59.79:358,60,0	1/1:5,22:28:60.13:631,60,0	1/1:4,0:21:39.84:200,40,0
chr10	88824641	.	T	TC	6781.34	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-11.796;DP=402;FS=13.761;HRun=1;HaplotypeScore=38.0365;InbreedingCoeff=0.9909;MQ=73.40;MQ0=0;MQRankSum=1.707;QD=42.65;ReadPosRankSum=-0.419;VQSLOD=3.0979;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.14:0,51,676	0/0:6,0:6:18.06:0,18,252	0/0:9,0:9:26.76:0,27,346	0/0:8,0:7:18.06:0,18,241	1/1:1,12:13:33.11:527,33,0	1/1:0,11:11:30.10:479,30,0	1/1:1,11:12:30.10:480,30,0	1/1:2,31:33:96.09:1452,96,0	0/0:13,0:13:39.13:0,39,545	0/0:19,0:19:57.19:0,57,797	0/0:13,0:13:39.12:0,39,530	1/1:0,13:13:36.12:575,36,0	0/0:24,0:24:66.21:0,66,901	1/1:0,11:11:30.10:479,30,0	0/0:15,0:15:39.13:0,39,543	0/0:12,0:12:33.10:0,33,448	0/0:24,0:24:69.23:0,69,965	1/1:0,11:11:30.10:479,30,0	0/0:18,0:18:54.17:0,54,739	0/0:11,0:11:33.10:0,33,447	1/1:0,9:9:24.08:384,24,0	1/1:0,4:4:12.04:192,12,0	0/0:9,0:9:24.08:0,24,333	0/0:6,0:6:18.06:0,18,251	0/0:16,0:16:48.16:0,48,671	1/1:0,15:14:45.13:681,45,0	0/0:23,0:23:60.18:0,60,835	1/1:2,25:26:66.22:1055,66,0
chr10	88824849	.	A	ATG	810.35	PASS	AB=0.955;AC=28;AF=0.636;AN=44;BaseQRankSum=-0.457;DP=173;FS=13.510;HRun=0;HaplotypeScore=39.2901;InbreedingCoeff=0.1662;MQ=44.50;MQ0=12;MQRankSum=3.661;QD=7.64;ReadPosRankSum=1.549;VQSLOD=1.5495;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,1:9:3.07:21,0,3	1/1:1,2:2:6.01:81,6,0	./.	./.	0/0:13,0:11:2.35:0,2,16	0/1:10,0:8:1.94:16,0,2	1/1:4,0:4:0.37:50,0,0	0/0:23,0:17:42.57:0,43,245	1/1:2,0:2:2.68:11,3,0	1/1:1,7:8:16.28:253,16,0	1/1:5,0:5:3:25,3,0	1/1:5,0:4:7.88:35,8,0	./.	1/1:8,0:7:8.57:56,9,0	1/1:5,0:5:3.01:56,3,0	0/1:4,0:4:0:0,0,0	0/1:11,3:13:18.70:187,0,19	0/1:11,0:9:9.26:48,0,9	0/1:5,0:5:32.47:32,0,40	1/1:1,0:1:2.98:22,3,0	0/0:1,0:1:2.96:0,3,19	1/1:3,0:2:2.90:16,3,0	./.	./.	./.	0/0:3,0:2:5.88:0,6,36	1/1:8,0:5:3.01:30,3,0	0/0:6,0:5:2.63:0,3,12
chr10	88824853	.	ATATAT	A	554.66	PASS	AB=0.879;AC=12;AF=0.261;AN=46;BaseQRankSum=3.176;DP=162;FS=0.941;HRun=0;HaplotypeScore=45.1821;InbreedingCoeff=0.2395;MQ=49.80;MQ0=10;MQRankSum=1.645;QD=9.24;ReadPosRankSum=0.989;VQSLOD=1.4687;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:9:9.42:0,9,106	0/0:3,0:2:6.02:0,6,145	./.	0/0:7,0:2:2.84:0,3,43	0/1:7,6:11:16.24:40,0,16	1/1:10,0:8:17.16:175,17,0	0/1:4,0:4:26.13:80,0,26	0/0:25,0:20:57.16:0,57,1121	0/0:2,0:2:3.01:0,3,39	0/0:9,0:9:18.06:0,18,326	0/0:3,0:3:3.01:0,3,90	0/1:4,1:4:22.18:92,0,22	./.	1/1:5,0:4:11.81:89,12,0	0/0:4,0:4:3.01:0,3,43	./.	0/1:13,0:12:41.69:42,0,438	1/1:8,0:7:9.64:149,10,0	0/0:6,0:6:18.01:0,18,416	0/0:1,0:1:3.01:0,3,73	1/1:0,0:1:3:28,3,0	0/0:3,0:2:3.01:0,3,35	./.	0/0:2,0:2:0:0,0,0	./.	0/0:2,0:2:6.02:0,6,80	0/0:6,0:4:3.01:0,3,81	0/0:6,0:5:8.38:0,8,68
chr10	88824857	.	AT	A	632.27	PASS	AB=0.923;AC=13;AF=0.295;AN=44;BaseQRankSum=3.170;DP=161;FS=0.000;HRun=1;HaplotypeScore=37.7029;InbreedingCoeff=0.5685;MQ=51.60;MQ0=7;MQRankSum=3.092;QD=10.37;ReadPosRankSum=0.704;VQSLOD=1.1701;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:5.85:0,6,60	0/0:3,0:2:6.02:0,6,70	./.	0/0:7,0:2:2.84:0,3,31	1/1:9,3:10:8.95:83,9,0	1/1:1,11:10:17.94:174,18,0	1/1:0,5:5:5.97:61,6,0	0/0:27,0:23:66.16:0,66,905	0/0:2,0:2:1.55:0,2,4	0/0:8,0:8:15.89:0,16,160	0/0:3,0:3:3.01:0,3,48	1/1:2,3:4:8.99:99,9,0	./.	1/1:3,2:4:12.04:153,12,0	0/0:3,0:3:2.37:0,2,8	./.	0/1:11,1:11:1.08:1,0,238	1/1:3,7:8:11.34:205,11,0	0/0:6,0:6:15.04:0,15,208	0/0:1,0:1:3:0,3,27	0/0:1,0:1:2.99:0,3,24	./.	./.	0/0:2,0:2:0:0,0,0	./.	0/0:2,0:2:6.02:0,6,76	0/0:6,0:5:6.01:0,6,67	0/0:6,0:5:8.97:0,9,78
chr10	88825217	.	TAGG	T	2548.03	PASS	AB=0.514;AC=7;AF=0.125;AN=56;BaseQRankSum=9.565;DP=604;FS=2.445;HRun=0;HaplotypeScore=83.1759;InbreedingCoeff=0.8439;MQ=69.40;MQ0=0;MQRankSum=-5.066;QD=34.43;ReadPosRankSum=-0.685;VQSLOD=4.0695;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.20:0,60,1339	0/0:8,0:8:24.08:0,24,554	0/0:17,0:16:42.14:0,42,954	0/0:19,0:19:51.09:0,51,1079	0/0:31,0:31:90.29:0,90,2007	0/0:22,0:22:63.16:0,63,1359	0/0:29,0:29:78.24:0,78,1679	1/1:0,25:23:69.21:1099,69,0	0/0:23,0:23:69.23:0,69,1548	0/0:30,0:30:87.30:0,87,2007	0/0:18,0:18:51.07:0,51,1121	0/0:20,0:20:60.21:0,60,1383	0/0:20,0:20:57.18:0,57,1255	0/0:23,0:23:69.24:0,69,1564	0/0:17,0:17:51.18:0,51,1175	0/0:25,0:25:72.21:0,72,1511	0/0:16,0:16:42.12:0,42,921	0/0:26,0:26:78.22:0,78,1749	0/0:21,0:21:63.22:0,63,1450	0/0:25,0:25:75.26:0,75,1727	1/1:3,17:20:30.06:480,30,0	0/0:26,0:26:72.25:0,72,1641	0/0:20,0:20:57.20:0,57,1291	0/0:17,0:17:51.18:0,51,1176	0/0:24,0:24:72.25:0,72,1659	0/1:1,18:19:12.05:810,0,12	0/0:31,0:31:87.27:0,87,1916	1/1:0,10:10:18.06:307,18,0
chr10	88825504	.	CCTAA	C	2087.70	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.729;DP=835;FS=6.033;HRun=0;HaplotypeScore=158.9277;InbreedingCoeff=0.9999;MQ=64.07;MQ0=2;MQRankSum=-2.369;QD=48.55;ReadPosRankSum=2.115;VQSLOD=4.2325;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,3210	0/0:14,0:14:42.14:0,42,1120	0/0:22,0:18:48.16:0,48,1227	0/0:33,0:25:72.19:0,72,1717	0/0:37,0:37:99:0,108,2850	0/0:29,0:29:81.27:0,81,2152	0/0:17,0:17:51.18:0,51,1318	0/0:29,0:29:87.29:0,87,2205	0/0:21,0:21:63.22:0,63,1658	0/0:39,0:39:99:0,114,2965	0/0:21,0:21:63.22:0,63,1672	0/0:37,0:37:99:0,102,2713	0/0:34,0:34:93.32:0,93,2454	0/0:43,0:43:99:0,126,3195	0/0:27,0:27:78.25:0,78,2023	0/0:38,0:38:99:0,105,2713	0/0:19,0:19:57.20:0,57,1499	0/0:17,0:17:51.18:0,51,1349	0/0:24,0:19:54.19:0,54,1410	0/0:35,0:35:96.33:0,96,2490	0/0:30,0:30:84.25:0,84,2044	0/0:38,0:38:99:0,108,2829	0/0:26,0:26:72.25:0,72,1880	0/0:33,0:33:96.31:0,96,2449	1/1:3,40:43:99:2183,117,0	0/0:34,0:34:99:0,99,2633	0/0:30,0:30:90.31:0,90,2380	0/0:21,0:21:57.20:0,57,1496
chr10	88827006	.	CT	C	1127.85	PASS	AB=0.950;AC=6;AF=0.107;AN=56;BaseQRankSum=-0.133;DP=573;FS=4.007;HRun=10;HaplotypeScore=71.5554;InbreedingCoeff=0.6265;MQ=69.64;MQ0=1;MQRankSum=2.623;QD=12.13;ReadPosRankSum=1.086;VQSLOD=3.4692;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,41:48:98.01:839,98,0	0/0:11,0:11:27.04:0,27,275	0/0:18,0:18:30.05:0,30,313	0/1:8,1:6:14.55:15,0,46	0/0:22,0:22:42.07:0,42,440	0/0:19,0:18:33.07:0,33,354	0/0:11,0:10:27.03:0,27,285	0/1:17,0:16:19.10:19,0,83	1/1:3,16:19:44.98:391,45,0	0/0:27,0:27:74.73:0,75,761	0/0:13,0:13:30.07:0,30,325	0/0:15,0:15:35.99:0,36,363	0/0:17,0:19:38.92:0,39,403	0/0:24,0:24:51.05:0,51,523	0/0:21,0:21:48.13:0,48,531	0/0:17,0:17:35.36:0,35,446	0/0:26,0:26:75.02:0,75,788	0/0:17,0:17:48.05:0,48,490	0/0:34,0:34:78.06:0,78,806	0/0:22,0:22:48.09:0,48,500	0/0:23,0:23:60.32:0,60,278	0/0:12,0:12:27.05:0,27,283	0/0:18,0:18:20.27:0,20,409	0/0:28,0:28:72.17:0,72,781	0/0:19,0:20:44.95:0,45,471	0/0:29,0:29:38.14:0,38,229	0/0:23,0:22:28.36:0,28,497	0/0:11,0:10:15.60:0,16,78
chr10	88827173	.	G	GCATCGCCATAATCA	38018.72	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-1.930;DP=625;FS=20.424;HRun=0;HaplotypeScore=221.9881;InbreedingCoeff=0.9986;MQ=87.98;MQ0=0;MQRankSum=-18.696;QD=145.11;ReadPosRankSum=-3.838;VQSLOD=2.9932;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.31:0,90,3691	0/0:15,0:15:45.14:0,45,1621	0/0:32,0:32:84.28:0,84,2776	0/0:22,0:22:60.14:0,60,2000	1/1:11,10:25:54.18:2932,54,0	1/1:11,10:23:51.18:3004,51,0	1/1:17,10:26:69.24:3825,69,0	1/1:19,3:24:66.23:3035,66,0	0/0:16,0:16:45.15:0,45,1873	0/0:21,0:21:60.19:0,60,2241	0/0:27,0:27:66.23:0,66,2465	1/1:9,11:20:54.19:3139,54,0	0/0:23,0:23:66.23:0,66,2630	1/1:10,9:20:57.19:3150,57,0	0/0:19,0:19:54.19:0,54,2186	0/0:15,0:15:42.14:0,42,1597	0/0:28,0:28:81.28:0,81,3204	1/1:4,4:9:24.08:1465,24,0	0/0:18,0:18:51.18:0,51,2092	0/0:22,0:22:63.69:0,64,2409	1/1:5,4:10:18.06:1126,18,0	1/1:12,9:23:60.21:3373,60,0	0/0:16,0:16:39.13:0,39,1492	0/0:27,0:27:75.26:0,75,2928	1/1:14,17:34:87.30:5532,87,0	1/1:11,13:27:78.25:4718,78,0	0/0:29,0:29:84.29:0,84,3331	1/1:7,9:18:39.13:2722,39,0
chr10	88827303	.	T	TC	11860.63	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-12.243;DP=663;FS=0.299;HRun=0;HaplotypeScore=64.6016;InbreedingCoeff=0.9975;MQ=89.23;MQ0=0;MQRankSum=-4.028;QD=42.06;ReadPosRankSum=1.162;VQSLOD=5.3921;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.25:0,81,1110	0/0:13,0:13:39.13:0,39,545	0/0:30,0:30:75.25:0,75,1045	0/0:20,0:20:60.19:0,60,803	1/1:0,34:34:99:1583,99,0	1/1:0,22:22:66.23:1054,66,0	1/1:0,23:22:51.17:814,51,0	1/1:0,15:15:45.14:698,45,0	0/0:23,0:23:69.23:0,69,965	0/0:20,0:20:60.20:0,60,839	0/0:26,0:25:75.25:0,75,1049	1/1:2,23:25:66.22:1044,66,0	0/0:22,0:22:63.21:0,63,880	1/1:0,30:30:87.30:1390,87,0	0/0:34,0:34:99:0,102,1427	0/0:21,0:21:60.20:0,60,839	0/0:25,0:25:75.20:0,75,1009	1/1:0,7:7:15.05:239,15,0	0/0:14,0:14:42.14:0,42,588	0/0:37,0:37:99:0,111,1553	1/1:0,17:17:36.12:575,36,0	1/1:1,29:30:78.27:1247,78,0	0/0:26,0:26:78.25:0,78,1074	0/0:16,0:16:48.12:0,48,649	1/1:1,30:31:87.30:1391,87,0	1/1:2,31:33:54.35:1442,54,0	0/0:26,0:26:78.26:0,78,1091	1/1:6,9:15:24.08:384,24,0
chr10	88827597	.	G	GT	13072.09	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=19.462;DP=826;FS=5.687;HRun=1;HaplotypeScore=103.9533;InbreedingCoeff=1.0000;MQ=87.13;MQ0=0;MQRankSum=-3.476;QD=38.91;ReadPosRankSum=0.786;VQSLOD=4.8207;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,1675	0/0:19,0:19:57.19:0,57,740	0/0:25,0:25:60.18:0,60,765	0/0:33,0:33:93.25:0,93,1148	1/1:1,29:30:78.22:1110,78,0	1/1:0,24:24:66.22:956,66,0	1/1:1,33:34:96.32:1387,96,0	1/1:1,34:35:99:1474,102,0	0/0:46,0:46:99:0,138,1792	0/0:29,0:29:81.13:0,81,1028	0/0:19,0:19:54.18:0,54,701	1/1:2,27:29:74.84:1092,75,0	0/0:32,0:32:87.28:0,87,1130	1/1:0,23:24:69.22:985,69,0	0/0:39,0:39:99:0,114,1451	0/0:33,0:33:96.30:0,96,1232	0/0:44,0:44:99:0,132,1711	1/1:1,18:19:48.13:676,48,0	0/0:22,0:22:66.20:0,66,841	0/0:26,0:26:72.23:0,72,934	1/1:0,47:47:99:1740,120,0	1/1:5,21:26:66.20:925,66,0	0/0:26,0:26:75.22:0,75,958	0/0:29,0:29:87.28:0,87,1130	1/1:0,27:27:72.24:1045,72,0	1/1:0,22:22:66.15:856,66,0	0/0:24,0:23:66.21:0,66,857	1/1:0,19:19:57.19:826,57,0
chr10	88827739	.	C	CG	27770.28	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.038;DP=745;FS=16.184;HRun=0;HaplotypeScore=121.3976;InbreedingCoeff=0.9694;MQ=79.58;MQ0=1;MQRankSum=-10.119;QD=40.19;ReadPosRankSum=6.738;VQSLOD=2.7852;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,53:54:99:2134,134,0	1/1:0,6:6:9.03:143,9,0	0/0:29,0:28:57.19:0,57,828	0/0:24,0:23:65.68:0,66,732	1/1:6,22:28:72.08:1012,72,0	1/1:4,13:17:45.11:653,45,0	1/1:7,22:29:78.05:1109,78,0	1/1:13,18:31:93.05:1217,93,0	1/1:2,26:28:63.21:1002,63,0	1/1:0,26:26:78.18:1189,78,0	1/1:0,27:27:74.96:1110,75,0	1/1:2,25:27:75.25:1152,75,0	1/1:0,36:36:99:1616,102,0	1/1:5,24:29:75.24:1117,75,0	1/1:1,34:35:93.32:1476,93,0	1/1:0,31:31:84.29:1335,84,0	1/1:4,41:45:99:1852,115,0	1/1:1,17:18:28.20:686,28,0	1/1:0,25:25:75.12:1043,75,0	1/1:0,30:30:75.18:1115,75,0	1/1:8,20:28:83.92:1071,84,0	1/1:2,22:24:72.21:1049,72,0	1/1:0,30:30:78.27:1231,78,0	1/1:0,21:21:51.17:811,51,0	1/1:3,14:17:51.17:787,51,0	1/1:4,11:15:45.05:610,45,0	1/1:0,24:23:57.19:894,57,0	1/1:3,7:10:24.06:354,24,0
chr10	88827760	.	TCTTTA	T	13561.90	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=10.367;DP=760;FS=2.879;HRun=0;HaplotypeScore=223.9426;InbreedingCoeff=0.9993;MQ=84.60;MQ0=1;MQRankSum=-17.127;QD=50.04;ReadPosRankSum=-0.767;VQSLOD=4.7264;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,126,3782	0/0:7,0:7:20.99:0,21,533	0/0:38,0:36:99:0,105,2846	0/0:34,0:32:79.30:0,79,2190	1/1:2,25:27:59.75:1149,60,0	1/1:2,15:17:51.16:1026,51,0	1/1:5,22:27:69.22:1372,69,0	1/1:3,25:28:78.14:1354,78,0	0/0:29,0:29:72.21:0,72,2050	0/0:32,0:32:96.33:0,96,2934	0/0:26,0:26:75.26:0,75,2305	1/1:2,27:29:84.29:1744,84,0	0/0:32,0:32:93.32:0,93,2800	1/1:4,25:29:69.24:1408,69,0	0/0:37,0:37:99:0,102,3090	0/0:34,0:34:81.26:0,81,2319	0/0:41,0:41:99:0,102,2883	1/1:4,8:12:33.11:690,33,0	0/0:28,0:28:78.24:0,78,2308	0/0:32,0:32:87.30:0,87,2638	1/1:8,19:27:48.04:858,48,0	1/1:2,28:30:78.22:1563,78,0	0/0:29,0:29:72.25:0,72,2186	0/0:18,0:18:48.16:0,48,1487	1/1:2,18:20:48.16:987,48,0	1/1:2,12:14:39.13:812,39,0	0/0:23,0:23:54.18:0,54,1602	1/1:1,10:11:33.04:598,33,0
chr10	88830239	.	TA	T	3713.07	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.941;DP=688;FS=6.972;HRun=3;HaplotypeScore=64.9792;InbreedingCoeff=0.9977;MQ=76.19;MQ0=0;MQRankSum=-1.509;QD=34.38;ReadPosRankSum=-3.271;VQSLOD=2.6019;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,1858	0/0:18,0:18:54.18:0,54,776	0/0:17,0:17:37.29:0,37,517	0/0:12,0:13:19.81:0,20,338	0/0:40,0:40:99:0,117,1645	0/0:26,0:26:72.20:0,72,986	0/0:14,0:14:42.14:0,42,605	1/1:0,36:36:99:1302,108,0	0/0:20,0:20:60.20:0,60,864	0/0:29,0:29:87.27:0,87,1208	0/0:11,0:11:33.11:0,33,475	0/0:23,0:23:63.20:0,63,891	0/0:25,0:25:72.24:0,72,1032	0/0:19,0:19:54.18:0,54,777	0/0:33,0:33:99:0,99,1410	0/0:27,0:27:81.27:0,81,1165	0/0:26,0:26:78.25:0,78,1105	0/0:8,0:8:24.08:0,24,346	0/0:31,0:31:93.30:0,93,1313	0/0:33,0:33:96.31:0,96,1366	1/1:2,28:30:81.25:1004,81,0	0/0:24,0:24:69.22:0,69,976	0/0:28,0:28:84.28:0,84,1208	0/0:19,0:19:57.19:0,57,821	0/0:18,0:18:54.17:0,54,759	1/1:2,30:32:87.20:1035,87,0	0/0:34,0:34:99:0,102,1399	1/1:0,10:10:30.09:372,30,0
chr10	88831083	.	G	GAA	644.21	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.757;DP=668;FS=1.776;HRun=9;HaplotypeScore=84.2613;InbreedingCoeff=0.9857;MQ=84.11;MQ0=1;MQRankSum=0.766;QD=30.68;ReadPosRankSum=-0.911;VQSLOD=3.7776;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:42.07:0,42,437	0/0:17,0:17:42.03:0,42,436	0/0:20,0:22:15.54:0,16,305	0/0:23,0:23:35.97:0,36,392	0/0:28,0:28:72.12:0,72,749	0/0:21,0:21:63.16:0,63,670	0/0:15,0:15:36.06:0,36,375	0/0:36,0:36:93.17:0,93,967	0/0:22,0:22:60.11:0,60,631	0/0:35,0:35:87.14:0,87,926	0/0:20,0:20:51.09:0,51,535	0/0:27,0:29:53.99:0,54,685	0/0:15,0:15:42.06:0,42,430	0/0:28,0:28:78.14:0,78,816	0/0:29,0:29:78.14:0,78,815	0/0:23,0:24:57.06:0,57,654	0/0:23,0:23:45.07:0,45,471	0/0:18,0:18:45.11:0,45,479	0/0:21,0:21:51.07:0,51,528	0/0:23,0:23:63.14:0,63,663	0/0:25,0:25:72.18:0,72,766	0/0:22,0:22:63.16:0,63,670	0/0:33,0:33:84.12:0,84,866	0/0:18,0:18:54.11:0,54,565	1/1:3,18:20:48.16:739,48,0	0/0:24,0:24:63.14:0,63,665	0/0:33,0:33:83.98:0,84,867	0/0:25,0:26:74.92:0,75,778
chr10	88831256	.	CTG	C	4928.32	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-3.255;DP=770;FS=18.292;HRun=0;HaplotypeScore=147.4617;InbreedingCoeff=0.9387;MQ=65.19;MQ0=24;MQRankSum=8.580;QD=13.11;ReadPosRankSum=5.215;VQSLOD=3.4251;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:36:36.72:182,37,0	1/1:2,0:7:8.99:43,9,0	0/0:55,0:21:15:0,15,184	0/0:50,0:21:10.50:0,11,91	0/0:4,0:28:9.87:0,10,64	0/0:3,0:18:22.75:0,23,194	0/0:5,0:14:11.90:0,12,94	0/0:42,0:41:65.31:0,65,793	1/1:16,1:32:37.10:202,37,0	1/1:10,0:27:42.61:210,43,0	1/1:5,1:20:34.32:190,34,0	0/0:3,0:24:29.99:0,30,257	1/1:9,17:27:41.61:442,42,0	0/0:9,0:31:23.51:0,24,225	1/1:7,24:33:62.84:683,63,0	1/1:9,16:26:43.51:466,44,0	1/1:14,0:30:31.25:154,31,0	0/0:1,0:12:13.72:0,14,109	1/1:12,12:25:30.37:314,30,0	1/1:13,15:31:47.50:471,47,0	0/0:38,0:36:3:0,3,27	0/0:4,0:22:12.67:0,13,144	1/1:5,15:21:38.94:428,39,0	1/1:9,24:34:71.77:785,72,0	0/0:2,0:14:15:0,15,129	0/0:25,0:27:22.70:0,23,455	1/1:11,12:23:32.93:359,33,0	0/0:4,0:11:23.77:0,24,234
chr10	88831840	.	AAG	A	1666.37	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.444;DP=617;FS=6.814;HRun=0;HaplotypeScore=96.7307;InbreedingCoeff=0.8997;MQ=68.38;MQ0=2;MQRankSum=1.150;QD=23.14;ReadPosRankSum=-2.652;VQSLOD=3.1237;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:28:28.98:0,29,963	0/0:6,0:6:9.03:0,9,147	0/0:29,0:21:20.90:0,21,237	0/0:37,0:30:2.57:0,3,359	0/0:27,0:27:57.19:0,57,915	0/0:25,0:25:60.15:0,60,893	0/0:14,0:14:39.13:0,39,631	1/1:7,20:27:63.16:739,63,0	0/0:18,1:19:17.25:0,17,785	0/0:30,0:30:75.26:0,75,1214	0/0:27,0:27:66.12:0,66,1047	0/0:17,0:17:45.15:0,45,734	0/0:21,0:21:57.19:0,57,917	0/0:25,0:25:60.20:0,60,967	0/0:16,0:15:42.14:0,42,670	0/0:16,0:16:39.13:0,39,631	0/0:22,0:22:50.60:0,51,818	0/0:23,0:23:57.19:0,57,917	0/0:16,1:17:33.11:0,33,538	0/0:31,2:33:29.51:0,30,1235	1/1:4,7:11:18.06:222,18,0	0/0:20,1:21:8.23:0,8,646	0/0:26,0:26:63.12:0,63,939	0/0:10,0:10:12.04:0,12,196	0/0:25,0:25:63.21:0,63,1013	1/1:7,19:26:57.15:678,57,0	0/0:31,0:30:68.98:0,69,1124	1/1:0,8:8:15.05:185,15,0
chr10	88832420	.	T	TTACCAATCC	1826.99	PASS	AC=18;AF=0.360;AN=50;BaseQRankSum=0.257;DP=510;FS=0.000;HRun=0;HaplotypeScore=118.9200;InbreedingCoeff=0.8218;MQ=52.19;MQ0=3;MQRankSum=-5.142;QD=23.42;ReadPosRankSum=-2.653;VQSLOD=2.6151;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,3066	0/0:6,0:6:15.05:0,15,459	0/0:23,0:15:3.32:0,3,924	0/0:27,0:22:57.16:0,57,1500	1/1:3,5:5:5.93:129,6,0	1/1:9,3:8:8.89:166,9,0	1/1:5,2:5:3.01:79,3,0	./.	0/0:16,0:16:42.13:0,42,1220	0/0:43,0:42:99:0,117,3388	0/0:30,0:30:81.23:0,81,2342	1/1:7,8:10:8.96:208,9,0	0/0:26,0:26:63.09:0,63,1706	1/1:4,7:8:12.04:473,12,0	0/0:25,0:25:60.13:0,60,1611	0/0:26,0:26:75.15:0,75,2111	0/0:29,0:27:69.17:0,69,1971	1/1:3,1:4:3.01:146,3,0	0/0:34,0:32:96.32:0,96,2809	0/0:30,0:30:81.21:0,81,2207	./.	1/1:4,4:6:8.86:165,9,0	0/0:31,0:31:87.30:0,87,2591	0/0:14,0:14:42.14:0,42,1282	./.	1/1:5,6:7:15.05:614,15,0	0/0:20,0:20:57.13:0,57,1604	1/1:1,0:1:2.99:24,3,0
chr10	88832499	.	T	TA	3685.25	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-1.967;DP=498;FS=5.503;HRun=4;HaplotypeScore=50.9195;InbreedingCoeff=0.9721;MQ=47.75;MQ0=16;MQRankSum=-6.539;QD=23.62;ReadPosRankSum=3.381;VQSLOD=2.4777;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,105,1176	0/0:8,0:8:21.06:0,21,238	0/0:10,0:3:9.01:0,9,88	0/0:16,0:5:15.04:0,15,163	1/1:0,11:9:24.08:326,24,0	1/1:1,19:16:30.10:410,30,0	1/1:5,13:14:18.06:246,18,0	1/1:4,6:7:15.05:205,15,0	0/0:14,0:14:36.10:0,36,408	0/0:33,0:33:84.22:0,84,943	0/0:24,0:24:50.99:0,51,577	1/1:1,19:18:30.07:389,30,0	0/0:25,0:25:75.18:0,75,829	1/1:2,15:12:30.10:403,30,0	0/0:24,0:24:66.17:0,66,739	0/0:12,0:12:36.10:0,36,408	0/0:22,0:23:25.91:0,26,547	1/1:0,5:5:9.03:123,9,0	0/0:24,0:16:45.12:0,45,501	0/0:31,0:31:84.20:0,84,935	1/1:1,5:5:15.05:205,15,0	1/1:0,14:11:24.08:327,24,0	0/0:27,0:26:60.17:0,60,678	0/0:7,0:7:21.06:0,21,238	1/1:1,10:11:27.09:368,27,0	1/1:2,14:12:22.17:437,22,0	0/0:22,0:21:60.13:0,60,666	1/1:0,8:7:18.06:246,18,0
chr10	88832612	.	GGTTCAGAGCTAAAAAAAAAAAACAAACAAACAAAAAAAACGA	G	1325.28	PASS	AB=0.775;AC=10;AF=0.192;AN=52;BaseQRankSum=0.890;DP=445;FS=4.607;HRun=0;HaplotypeScore=375.8442;InbreedingCoeff=0.6038;MQ=53.66;MQ0=15;MQRankSum=-3.648;QD=36.81;ReadPosRankSum=0.542;VQSLOD=1.1855;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:93.15:0,93,6959	0/0:10,0:8:15.05:0,15,1633	0/0:18,0:6:15.05:0,15,689	0/0:14,0:8:21.05:0,21,710	./.	1/1:0,8:7:6.02:656,6,0	0/1:2,0:2:12.98:13,0,133	0/0:14,0:7:21.07:0,21,1418	0/0:13,0:11:21.07:0,21,1819	0/0:29,0:27:84.15:0,84,10555	0/0:21,0:21:42.14:0,42,5226	1/1:3,1:2:5.81:34,6,0	0/0:21,0:21:57.62:0,58,6704	0/1:2,9:11:99:323,0,152	0/0:20,0:20:60.16:0,60,8345	0/0:22,0:22:51.13:0,51,5847	0/0:31,0:30:84.25:0,84,10733	1/1:2,0:2:6.02:90,6,0	0/0:16,0:10:27.05:0,27,3024	0/0:26,0:24:60.21:0,60,7867	0/0:7,0:5:6.02:0,6,506	./.	0/0:26,0:23:48.16:0,48,6643	0/0:21,0:21:54.19:0,54,8277	1/1:0,9:9:6:351,6,0	0/0:16,0:15:38.38:0,38,3724	0/0:32,0:31:81.28:0,81,9935	0/0:9,0:9:18.06:0,18,1355
chr10	88832622	.	TA	T	5667.80	PASS	AB=0.920;AC=43;AF=0.935;AN=46;BaseQRankSum=-3.694;DP=433;FS=0.000;HRun=12;HaplotypeScore=97.9081;InbreedingCoeff=0.4246;MQ=57.90;MQ0=8;MQRankSum=-0.359;QD=13.86;ReadPosRankSum=3.683;VQSLOD=5.1227;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,26:33:68.68:532,69,0	1/1:4,6:8:8.93:70,9,0	0/1:21,2:9:9.56:10,0,55	0/0:20,0:11:22.56:0,23,151	./.	1/1:8,0:7:4.44:14,4,0	./.	1/1:10,4:9:12.39:92,12,0	1/1:4,5:7:14.88:116,15,0	1/1:6,27:31:80.60:624,81,0	1/1:2,21:23:38.79:302,39,0	./.	1/1:3,18:21:47.53:370,48,0	1/1:11,0:11:2.20:7,2,0	1/1:2,19:21:50.40:394,50,0	1/1:3,16:19:41.84:324,42,0	1/1:6,25:31:74.71:580,75,0	./.	1/1:3,7:9:20.92:162,21,0	1/1:2,26:28:68.70:533,69,0	1/1:6,1:6:2.47:9,2,0	./.	1/1:3,20:23:47.78:371,48,0	1/1:1,19:20:55.04:420,55,0	1/1:9,0:9:2.22:7,2,0	1/1:12,4:16:3.94:155,4,0	1/1:3,29:32:71.70:555,72,0	1/1:6,0:6:5.47:23,5,0
chr10	88832632	.	A	AAC	414.74	PASS	AB=0.806;AC=6;AF=0.107;AN=56;BaseQRankSum=-0.108;DP=472;FS=1.683;HRun=0;HaplotypeScore=127.5873;InbreedingCoeff=0.2934;MQ=58.67;MQ0=4;MQRankSum=-2.126;QD=9.02;ReadPosRankSum=-2.942;VQSLOD=3.1420;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:1.37:0,1,433	0/0:10,0:10:11.87:0,12,81	0/0:27,0:11:22.61:0,23,195	0/0:24,0:14:33.61:0,34,284	0/0:1,0:1:2.97:0,3,20	0/0:8,0:7:5.68:0,6,27	0/0:5,0:3:3.43:0,3,19	0/1:12,0:9:7.19:41,0,7	0/0:8,0:6:15.66:0,16,99	0/0:35,0:35:70.35:0,70,565	0/0:28,0:28:59.33:0,59,382	0/0:5,0:4:9.33:0,9,57	0/0:22,0:22:26.44:0,26,293	0/0:11,0:11:2.83:0,3,14	0/0:25,0:25:64.95:0,65,446	0/0:19,0:19:25.44:0,25,278	0/0:28,0:28:80.26:0,80,562	0/0:2,0:2:2.94:0,3,18	0/0:13,0:11:29.66:0,30,201	0/0:31,0:31:78.54:0,79,545	1/1:2,6:9:2.96:49,3,0	0/0:1,0:1:3:0,3,25	0/0:24,0:24:59.42:0,59,413	0/0:23,0:23:59.27:0,59,409	0/0:9,0:9:2.84:0,3,14	0/1:7,12:19:14.63:340,0,15	0/0:32,0:31:30.68:0,31,421	1/1:1,5:6:6:99,6,0
chr10	88832634	.	ACAAAC	A	491.85	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=2.904;DP=471;FS=2.274;HRun=0;HaplotypeScore=146.3634;InbreedingCoeff=0.6864;MQ=57.61;MQ0=4;MQRankSum=-6.998;QD=5.93;ReadPosRankSum=-4.295;VQSLOD=0.5537;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:63.65:0,64,1201	0/0:8,0:8:12.04:0,12,235	0/0:22,0:10:22.22:0,22,352	0/0:22,0:14:30.79:0,31,420	1/1:1,0:1:2.96:19,3,0	1/1:8,0:7:6.02:70,6,0	1/1:5,0:3:5.93:39,6,0	1/1:4,7:8:18.43:194,18,0	0/0:9,0:7:16.65:0,17,218	0/0:35,0:35:99:0,100,1755	0/0:28,0:28:60.14:0,60,1100	1/1:6,0:5:14.87:105,15,0	0/0:20,0:20:47.34:0,47,878	1/1:11,0:11:2.99:35,3,0	0/0:26,0:26:57.83:0,58,1191	0/0:19,0:19:44.26:0,44,780	0/0:29,0:29:81.75:0,82,1568	1/1:2,0:2:5.93:40,6,0	0/0:13,0:11:28.64:0,29,509	0/0:33,0:33:77.75:0,78,1559	0/1:9,0:9:1.29:32,0,1	1/1:2,0:2:2.97:20,3,0	0/0:24,0:24:60.20:0,60,1145	0/0:23,0:23:59.63:0,60,1110	1/1:9,0:9:3.01:35,3,0	0/1:19,0:19:83.98:84,0,209	0/0:32,0:31:64.13:0,64,1154	0/0:5,0:5:2.49:0,2,5
chr10	88832643	.	C	CA	978.99	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=2.112;DP=474;FS=1.989;HRun=8;HaplotypeScore=111.6457;InbreedingCoeff=0.7328;MQ=57.78;MQ0=3;MQRankSum=-8.016;QD=15.54;ReadPosRankSum=-3.781;VQSLOD=2.7159;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:8,28:35:47.76:802,48,0	0/0:7,0:7:9:0,9,82	0/0:20,0:9:1.61:0,2,94	0/0:22,0:14:12.09:0,12,150	1/1:2,0:2:2.98:21,3,0	0/0:8,0:7:4.44:0,4,14	1/1:4,0:2:5.95:42,6,0	0/0:12,0:9:17.60:0,18,162	1/1:3,6:8:11.06:110,11,0	0/0:33,0:33:92.99:0,93,835	0/0:31,1:32:34.46:0,34,567	1/1:6,0:5:14.90:110,15,0	0/0:17,0:17:45.02:0,45,411	0/0:9,0:9:2.21:0,2,7	0/0:28,0:28:53.45:0,53,493	0/0:21,0:21:36.01:0,36,329	0/0:30,0:30:84.04:0,84,768	1/1:3,0:3:5.92:39,6,0	0/0:15,0:13:36.01:0,36,324	0/0:35,1:36:58.38:0,58,780	0/0:11,0:11:20.85:0,21,169	1/1:3,0:2:2.98:21,3,0	0/0:25,0:25:60.02:0,60,547	0/0:25,0:25:65.16:0,65,601	0/0:9,0:9:2.22:0,2,7	0/0:22,0:22:14.21:0,14,246	0/0:26,0:25:54.02:0,54,493	0/0:3,0:3:5.99:0,6,48
chr10	88832651	.	A	AT	599.75	PASS	AB=0.786;AC=12;AF=0.214;AN=56;BaseQRankSum=3.717;DP=456;FS=0.587;HRun=0;HaplotypeScore=100.3053;InbreedingCoeff=0.6208;MQ=57.34;MQ0=1;MQRankSum=-7.286;QD=9.09;ReadPosRankSum=-1.547;VQSLOD=2.9866;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:31:14.33:289,14,0	0/0:6,0:6:11.95:0,12,139	0/0:15,0:9:5.25:0,5,156	0/0:16,0:13:17.42:0,17,308	1/1:0,5:5:5.75:50,6,0	0/0:8,0:7:4.44:0,4,14	1/1:3,4:5:8.99:96,9,0	0/0:11,0:11:30.06:0,30,352	0/1:8,0:7:19.76:29,0,20	0/0:34,0:34:99:0,102,1344	0/0:29,0:29:58.41:0,58,934	1/1:3,4:6:14.98:172,15,0	0/0:18,0:18:48.15:0,48,648	0/0:9,0:9:1.73:0,2,5	0/0:24,0:24:60.06:0,60,787	0/0:16,0:16:36.12:0,36,500	0/0:31,0:31:93.27:0,93,1241	0/1:1,3:4:4.71:83,0,5	0/0:18,0:16:45.12:0,45,582	0/0:36,0:36:89.20:0,89,1274	0/0:14,0:14:26.97:0,27,311	1/1:0,3:2:3.01:39,3,0	0/0:26,0:26:69.13:0,69,892	0/0:26,0:26:72.20:0,72,982	0/0:9,0:9:2.22:0,2,7	0/0:14,0:14:36.08:0,36,471	0/0:26,0:25:63.11:0,63,811	0/0:2,0:2:6.02:0,6,82
chr10	88833323	.	TCTC	T	5567.63	PASS	AB=0.556;AC=44;AF=0.917;AN=48;BaseQRankSum=-0.991;DP=368;FS=0.000;HRun=0;HaplotypeScore=35.7927;InbreedingCoeff=0.1217;MQ=22.36;MQ0=101;MQRankSum=2.274;QD=22.01;ReadPosRankSum=1.557;VQSLOD=4.0650;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:8.99:131,9,0	./.	0/0:54,0:1:3.01:0,3,74	./.	0/1:3,7:9:26.69:312,0,27	1/1:0,15:15:18.03:299,18,0	1/1:2,2:2:6.02:111,6,0	./.	1/1:1,15:12:21.07:385,21,0	1/1:1,11:9:27.09:501,27,0	0/1:1,10:10:38.73:100,0,39	1/1:2,7:6:15.01:242,15,0	1/1:0,15:12:2.59:55,3,0	1/1:1,8:6:6.02:111,6,0	1/1:0,15:11:15.05:268,15,0	1/1:0,11:10:9.03:167,9,0	1/1:3,7:4:3.01:56,3,0	1/1:2,3:5:9.03:167,9,0	1/1:6,5:4:12.03:194,12,0	1/1:2,14:13:21.07:390,21,0	./.	1/1:1,8:9:12.04:223,12,0	1/1:1,8:7:9.03:167,9,0	1/1:0,5:5:6.02:111,6,0	1/1:2,13:12:9.03:166,9,0	1/1:2,14:15:45.11:798,45,0	1/1:0,17:15:24.08:446,24,0	1/1:0,5:5:9.03:167,9,0
chr10	88833667	.	TTCCAGGGACTAAGCCACTACCCAAAGA	T	11612.29	PASS	AB=0.591;AC=9;AF=0.161;AN=56;BaseQRankSum=11.804;DP=583;FS=0.000;HRun=0;HaplotypeScore=292.2074;InbreedingCoeff=0.2927;MQ=47.10;MQ0=29;MQRankSum=-10.531;QD=122.23;ReadPosRankSum=4.359;VQSLOD=3.9273;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:51:90.31:0,90,9303	0/0:11,0:9:20.86:0,21,1960	0/0:10,0:1:3.01:0,3,280	0/0:17,0:3:9.03:0,9,825	0/1:8,5:9:99:508,0,1129	0/1:1,18:18:99:2864,0,321	1/1:3,10:10:21.07:1256,21,0	0/0:24,0:15:42.14:0,42,4079	0/0:23,0:22:57.20:0,57,6305	0/0:18,0:16:48.16:0,48,5134	0/0:19,0:19:39.13:0,39,4336	0/1:2,12:14:99:2420,0,690	0/0:13,0:13:36.12:0,36,3996	0/1:4,16:20:99:2855,0,1406	0/0:18,0:18:54.19:0,54,5939	0/0:29,0:28:72.25:0,72,8760	0/0:41,0:41:75.26:0,75,7180	0/1:4,6:6:99:879,0,348	0/0:19,0:9:27.09:0,27,2708	0/0:26,0:23:54.19:0,54,5575	0/0:46,0:41:99:0,108,12603	1/1:1,5:4:12.04:831,12,0	0/0:18,0:14:26.91:0,27,2479	0/0:32,0:30:60.21:0,60,6648	0/0:23,0:22:45.63:0,46,4838	0/0:15,0:13:39.13:0,39,4550	0/0:24,0:24:54.19:0,54,5665	0/0:9,0:9:21.07:0,21,2650
chr10	88833928	.	TG	T	824.09	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.037;DP=645;FS=2.826;HRun=1;HaplotypeScore=74.9805;InbreedingCoeff=0.8502;MQ=55.05;MQ0=32;MQRankSum=0.775;QD=32.96;ReadPosRankSum=1.787;VQSLOD=3.5169;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1767	0/0:13,0:13:39.13:0,39,614	0/0:30,0:4:9.02:0,9,122	0/0:13,0:3:6.02:0,6,91	0/0:37,0:37:99:0,105,1656	0/0:19,0:18:48.16:0,48,767	0/0:15,0:14:36.12:0,36,565	0/0:19,0:18:48.01:0,48,623	0/0:35,0:35:99:0,105,1649	0/0:31,0:31:93.31:0,93,1466	0/0:29,0:28:75.26:0,75,1196	0/0:20,0:20:54.18:0,54,847	0/0:13,0:13:39.13:0,39,615	0/0:25,0:25:72.24:0,72,1098	0/0:26,0:26:78.27:0,78,1243	0/0:25,0:24:72.23:0,72,1122	0/0:14,0:14:39.13:0,39,617	0/0:18,0:17:48.12:0,48,717	0/0:29,0:24:72.25:0,72,1143	0/0:31,0:31:87.23:0,87,1300	0/0:7,0:7:21.07:0,21,315	0/0:31,0:30:90.28:0,90,1390	0/0:30,0:30:81.25:0,81,1247	0/0:19,0:19:57.18:0,57,885	1/1:0,25:25:66.22:919,66,0	0/0:15,0:16:44.99:0,45,654	0/0:27,0:26:75.26:0,75,1196	0/0:9,0:9:18.06:0,18,269
chr10	88833968	.	C	CA	4318.77	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-3.672;DP=676;FS=6.890;HRun=8;HaplotypeScore=75.7057;InbreedingCoeff=0.9857;MQ=63.14;MQ0=2;MQRankSum=1.251;QD=28.04;ReadPosRankSum=-0.045;VQSLOD=5.0264;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:33:84.08:946,84,0	0/0:13,0:13:30.01:0,30,274	0/0:22,0:16:39:0,39,355	0/0:12,0:9:20.97:0,21,181	0/0:33,0:33:84.03:0,84,764	0/0:26,0:26:65.99:0,66,596	0/0:13,0:13:34.56:0,35,301	1/1:9,29:38:87.26:1004,87,0	1/1:0,28:29:84.08:949,84,0	0/0:40,0:39:99:0,114,1042	0/0:29,0:29:75.01:0,75,681	0/0:28,0:28:72.03:0,72,659	0/0:17,0:17:41.97:0,42,384	0/0:18,0:18:54.03:0,54,494	0/0:23,0:23:63.03:0,63,576	0/0:24,0:24:72:0,72,647	0/0:17,0:17:45.02:0,45,411	0/0:13,0:13:38.05:0,38,335	0/0:26,0:26:75.04:0,75,686	0/0:31,0:31:84.04:0,84,769	1/1:3,10:13:24.07:277,24,0	0/0:33,0:33:90.04:0,90,823	0/0:20,0:20:47.98:0,48,439	0/0:21,0:21:54.02:0,54,494	0/0:26,0:25:63.03:0,63,577	1/1:1,24:25:69.20:789,69,0	0/0:36,0:35:99:0,102,925	1/1:4,12:16:8.64:353,9,0
chr10	88835371	.	GCTT	G	2463.72	PASS	AB=0.519;AC=7;AF=0.125;AN=56;BaseQRankSum=8.933;DP=482;FS=7.075;HRun=0;HaplotypeScore=69.1543;InbreedingCoeff=0.7679;MQ=72.79;MQ0=0;MQRankSum=-1.669;QD=43.22;ReadPosRankSum=-0.143;VQSLOD=4.8537;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:30.10:0,30,689	0/0:10,0:10:30.10:0,30,691	0/0:10,0:10:27.07:0,27,510	0/0:14,0:14:39.13:0,39,873	0/0:15,0:15:42.14:0,42,938	0/0:12,0:12:36.12:0,36,828	0/0:15,0:15:45.14:0,45,975	1/1:1,21:22:63.20:1045,63,0	0/0:17,0:17:48.16:0,48,1085	0/0:17,1:18:0:0,0,1043	0/0:27,0:27:78.26:0,78,1754	0/0:17,0:17:48.16:0,48,1103	0/0:25,0:25:72.25:0,72,1657	0/0:16,0:16:45.15:0,45,1036	0/0:15,0:15:45.12:0,45,959	0/0:22,0:22:66.23:0,66,1519	0/0:21,0:21:63.22:0,63,1452	0/0:11,0:11:33.11:0,33,761	0/0:25,0:25:66.23:0,66,1520	0/0:26,0:26:78.24:0,78,1671	1/1:0,10:10:24.08:409,24,0	0/0:14,0:14:39.13:0,39,898	0/0:21,0:21:60.21:0,60,1383	0/0:16,0:16:48.16:0,48,1107	0/0:21,0:21:60.20:0,60,1340	0/1:1,13:14:28.32:594,0,28	0/0:24,0:24:69.24:0,69,1589	1/1:0,11:11:33.11:563,33,0
chr10	88835482	.	T	TA	4527.76	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-11.971;DP=484;FS=33.893;HRun=7;HaplotypeScore=50.0976;InbreedingCoeff=0.9885;MQ=72.53;MQ0=0;MQRankSum=0.763;QD=30.19;ReadPosRankSum=1.298;VQSLOD=2.7283;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:30.04:0,30,290	0/0:17,0:17:48.08:0,48,463	0/0:11,0:11:27.01:0,27,250	0/0:7,0:7:9.45:0,9,68	1/1:1,23:24:60.10:686,60,0	1/1:3,21:24:54.17:652,54,0	1/1:1,12:13:33.10:399,33,0	0/0:21,0:21:45.05:0,45,430	0/0:14,0:14:33.05:0,33,319	0/0:20,0:20:57.06:0,57,538	0/0:23,0:23:51.07:0,51,491	1/1:2,19:21:60.18:721,60,0	0/0:19,0:19:54.09:0,54,522	1/1:1,13:14:27.08:326,27,0	0/0:26,0:26:60.09:0,60,579	0/0:22,0:22:51.07:0,51,492	0/0:18,0:18:48.07:0,48,464	1/1:1,13:14:36.08:419,36,0	0/0:13,0:13:39.06:0,39,377	0/0:20,0:20:54.03:0,54,511	0/0:9,0:9:24.03:0,24,232	1/1:1,15:16:45.14:544,45,0	0/0:15,0:15:36.06:0,36,348	0/0:9,0:9:24.03:0,24,226	1/1:1,23:24:66.16:781,66,0	0/0:22,0:22:66.11:0,66,637	0/0:26,0:26:75.12:0,75,724	0/0:7,0:7:18.03:0,18,174
chr10	88837518	.	AGCCCAGCTGCTGCGT	A	744.83	PASS	AC=14;AF=0.368;AN=38;BaseQRankSum=4.422;DP=549;FS=2.740;HRun=0;HaplotypeScore=123.5389;InbreedingCoeff=0.6459;MQ=30.41;MQ0=216;MQRankSum=-1.980;QD=6.01;ReadPosRankSum=-0.188;VQSLOD=1.8920;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:13:6.02:0,6,70	./.	./.	./.	./.	0/0:13,0:8:3.01:0,3,35	0/0:48,0:17:5.81:0,6,89	./.	0/0:26,0:19:21.07:0,21,921	1/1:12,5:9:9.50:143,10,0	./.	0/0:38,0:35:29.89:0,30,1130	1/1:15,0:9:9.03:256,9,0	0/0:39,0:35:17.85:0,18,584	./.	1/1:7,0:7:6.02:74,6,0	1/1:15,8:13:6.02:161,6,0	0/0:22,0:11:6.02:0,6,254	./.	0/0:4,0:4:0.27:0,0,2	0/0:71,0:33:4.89:0,5,40	./.	1/1:6,0:4:0.38:0,0,0	1/1:45,0:23:6.02:104,6,0	0/0:20,0:20:10.27:0,10,108	0/0:15,0:9:12.03:0,12,385	1/1:11,0:10:5.91:141,6,0	0/0:12,0:4:9.03:0,9,114
chr10	88837519	.	GCCCAGCTGCTGCGT	G	261.55	PASS	AB=0.929;AC=8;AF=0.167;AN=48;BaseQRankSum=5.442;DP=545;FS=6.565;HRun=0;HaplotypeScore=119.3806;InbreedingCoeff=-0.0330;MQ=30.30;MQ0=215;MQRankSum=-2.812;QD=2.13;ReadPosRankSum=0.833;VQSLOD=1.1999;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:12:14.90:0,15,205	0/0:8,0:5:12.03:0,12,144	./.	./.	0/0:7,0:5:6.02:0,6,78	0/0:13,0:8:11.93:0,12,124	0/0:48,0:17:20.66:0,21,286	0/0:13,0:3:9.03:0,9,117	0/0:26,0:19:36.11:0,36,1312	0/1:17,0:9:6.71:7,0,156	./.	0/0:36,0:33:59.88:0,60,1825	0/1:11,4:9:48.87:166,0,49	0/0:39,0:35:47.78:0,48,1139	0/0:14,0:13:29.33:0,29,185	0/1:7,0:7:12.23:12,0,68	0/1:23,0:13:72.99:73,0,107	0/0:22,0:11:21.07:0,21,489	0/0:18,0:5:11.84:0,12,84	0/0:4,0:4:3.83:0,4,19	0/0:71,0:33:40.72:0,41,486	./.	1/1:6,0:4:2.10:9,2,0	0/1:41,3:22:25.01:25,0,135	0/0:21,0:21:34.34:0,34,514	0/0:15,0:9:27.07:0,27,710	0/1:9,2:10:56.65:90,0,57	0/0:12,0:4:12.04:0,12,269
chr10	88837860	.	TCCCTCA	T	9880.62	PASS	AB=0.667;AC=49;AF=0.875;AN=56;BaseQRankSum=2.449;DP=537;FS=4.048;HRun=0;HaplotypeScore=143.7145;InbreedingCoeff=0.6927;MQ=64.83;MQ0=4;MQRankSum=-5.682;QD=21.86;ReadPosRankSum=3.273;VQSLOD=4.1166;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,14:34:13.29:308,13,0	0/1:4,4:8:84.01:233,0,84	0/0:25,0:21:21.07:0,21,517	0/0:38,0:32:16.24:0,16,615	1/1:0,13:13:21.07:435,21,0	1/1:9,9:18:27.09:559,27,0	1/1:11,7:16:15.05:311,15,0	1/1:30,4:33:12:158,12,0	1/1:8,14:22:36.12:746,36,0	1/1:5,5:10:18.03:299,18,0	1/1:7,5:12:12.04:248,12,0	1/1:10,13:23:45.15:932,45,0	1/1:7,11:17:24.08:497,24,0	1/1:5,13:18:21.07:434,21,0	1/1:8,13:19:33.11:683,33,0	1/1:12,12:24:27.09:559,27,0	1/1:8,6:14:12.04:249,12,0	1/1:7,7:14:18.06:373,18,0	1/1:13,4:17:12.04:249,12,0	1/1:5,9:13:15.05:311,15,0	1/1:17,12:26:9.03:186,9,0	1/1:8,7:15:18.06:373,18,0	1/1:4,7:11:15.05:311,15,0	1/1:16,5:21:6.02:124,6,0	0/0:22,0:22:36.12:0,36,1165	1/1:11,11:20:33.11:683,33,0	1/1:7,9:16:27.09:559,27,0	1/1:5,1:6:3.01:62,3,0
chr10	88838814	.	TTC	T	11928.70	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=14.809;DP=501;FS=2.469;HRun=0;HaplotypeScore=74.1762;InbreedingCoeff=0.9960;MQ=73.23;MQ0=0;MQRankSum=-3.424;QD=37.87;ReadPosRankSum=0.289;VQSLOD=6.4580;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.16:0,48,862	1/1:0,14:14:39.09:536,39,0	0/0:11,0:11:33.11:0,33,541	0/0:10,0:10:30.02:0,30,482	0/0:18,0:18:51.17:0,51,935	0/0:21,0:21:63.22:0,63,1155	0/0:11,0:11:27.09:0,27,479	1/1:0,35:35:99:1389,102,0	0/0:16,0:16:45.14:0,45,793	1/1:3,22:25:66.22:945,66,0	1/1:0,14:14:36.03:470,36,0	0/0:16,0:16:45.15:0,45,825	1/1:0,17:17:48.16:687,48,0	0/0:20,0:20:57.18:0,57,1014	1/1:1,18:19:45.15:645,45,0	1/1:0,8:8:18.02:235,18,0	1/1:0,20:20:60.20:860,60,0	0/0:25,0:25:75.26:0,75,1374	1/1:0,19:19:54.16:753,54,0	1/1:1,29:30:87.17:1178,87,0	1/1:1,5:6:15.03:196,15,0	0/0:20,0:20:60.21:0,60,1087	1/1:0,18:18:44.95:645,45,0	1/1:0,8:8:24.08:341,24,0	1/1:1,14:15:45.15:644,45,0	1/1:5,20:25:75.19:1034,75,0	1/1:3,19:22:54.18:774,54,0	1/1:2,18:20:45.07:600,45,0
chr10	88838874	.	TG	T	3054.95	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.612;DP=538;FS=2.503;HRun=3;HaplotypeScore=82.2928;InbreedingCoeff=0.9965;MQ=77.85;MQ0=1;MQRankSum=-1.353;QD=32.16;ReadPosRankSum=-1.046;VQSLOD=3.3006;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39.13:0,39,562	0/0:16,0:16:42.14:0,42,604	0/0:22,0:21:60.18:0,60,836	0/0:17,0:16:32.32:0,32,441	0/0:20,0:20:60.20:0,60,863	0/0:24,0:24:69.22:0,69,974	0/0:12,0:13:31.39:0,31,512	1/1:0,27:27:81.24:992,81,0	0/0:19,1:20:23:0,23,782	0/0:27,0:27:78.22:0,78,1099	0/0:23,0:23:69.23:0,69,992	0/0:13,0:13:39.13:0,39,562	0/0:23,0:23:69.21:0,69,972	0/0:20,0:20:51.17:0,51,732	0/0:25,0:25:69.23:0,69,992	0/0:10,0:10:24.08:0,24,346	0/0:14,0:14:39.10:0,39,539	0/0:22,0:22:65.96:0,66,916	0/0:19,0:19:51.17:0,51,730	0/0:32,0:32:96.32:0,96,1382	1/1:1,11:12:30.09:371,30,0	0/0:21,0:21:60.19:0,60,847	0/0:19,0:19:48.06:0,48,690	0/0:12,0:12:36.12:0,36,518	1/1:0,23:23:69.22:855,69,0	1/1:5,22:27:28.99:789,29,0	0/0:17,0:17:48.16:0,48,688	1/1:0,6:6:18.06:223,18,0
chr10	88839144	.	T	TATAC	7959.40	PASS	AB=0.693;AC=24;AF=0.444;AN=54;BaseQRankSum=-7.854;DP=831;FS=1.897;HRun=0;HaplotypeScore=180.7557;InbreedingCoeff=0.7543;MQ=65.40;MQ0=6;MQRankSum=-0.974;QD=18.42;ReadPosRankSum=-3.228;VQSLOD=4.2612;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:44,0:52:17.52:312,18,0	0/0:3,0:14:21.01:0,21,192	./.	0/0:16,0:10:1.82:0,2,5	0/1:14,12:27:16.61:606,0,17	1/1:13,15:28:39.13:915,39,0	1/1:22,9:32:18.06:424,18,0	1/1:40,0:40:30.09:502,30,0	1/1:16,20:39:48.16:1128,48,0	0/0:5,0:25:45.05:0,45,417	0/0:7,0:11:6.01:0,6,56	1/1:16,15:32:30.10:707,30,0	0/0:40,0:40:66.22:0,66,1023	1/1:16,18:35:45.15:1057,45,0	0/0:44,0:44:69.20:0,69,1030	0/0:45,0:44:81.22:0,81,1174	0/0:15,0:23:3:0,3,28	0/1:14,9:23:19.62:495,0,20	0/0:20,0:20:27.09:0,27,420	0/0:23,0:23:39.12:0,39,577	1/1:37,0:46:10.84:76,11,0	1/1:12,20:32:48.16:1131,48,0	0/0:29,0:29:51.15:0,51,747	0/0:24,0:24:36.12:0,36,555	0/0:23,0:23:42.14:0,42,647	1/1:26,0:37:36.10:556,36,0	0/0:40,0:40:81.22:0,81,1189	1/1:8,0:8:3.01:48,3,0
chr10	88840436	.	AG	A	3945.30	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=14.513;DP=602;FS=2.732;HRun=8;HaplotypeScore=71.7587;InbreedingCoeff=0.9926;MQ=83.33;MQ0=1;MQRankSum=-2.725;QD=14.72;ReadPosRankSum=1.722;VQSLOD=3.8156;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:84.07:0,84,1002	0/0:8,0:8:18.06:0,18,217	0/0:28,0:27:55.51:0,56,650	0/0:12,0:12:29.12:0,29,321	1/1:1,0:28:50.93:150,51,0	1/1:2,0:31:49.75:154,50,0	1/1:2,0:22:32.59:96,33,0	1/1:5,28:33:80.98:758,81,0	0/0:26,0:25:72.21:0,72,853	0/0:20,0:20:51.16:0,51,616	0/0:30,0:30:78.23:0,78,928	1/1:1,0:12:22.41:66,22,0	0/0:13,0:13:36.11:0,36,435	1/1:4,0:13:14.26:42,14,0	0/0:20,0:20:54.17:0,54,652	0/0:16,0:16:42.13:0,42,507	0/0:17,0:17:48.15:0,48,580	1/1:1,0:8:14.26:42,14,0	0/0:19,0:20:57.04:0,57,667	0/0:29,0:29:78.18:0,78,903	1/1:2,26:28:69.11:666,69,0	1/1:1,0:14:24.44:72,24,0	0/0:18,0:18:51.14:0,51,603	0/0:24,0:24:69.21:0,69,834	1/1:3,22:25:63.10:608,63,0	1/1:4,19:23:26.85:538,27,0	0/0:19,0:19:54.12:0,54,630	1/1:0,31:31:78.13:753,78,0
chr10	88841312	.	G	GT	1847.27	PASS	AB=0.654;AC=8;AF=0.143;AN=56;BaseQRankSum=8.050;DP=533;FS=4.643;HRun=6;HaplotypeScore=75.5038;InbreedingCoeff=0.2018;MQ=66.54;MQ0=1;MQRankSum=-6.401;QD=17.10;ReadPosRankSum=1.452;VQSLOD=3.5415;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:52.36:0,52,523	0/0:7,0:7:18.04:0,18,183	0/0:13,0:10:16.82:0,17,147	0/0:21,0:18:33.76:0,34,307	0/1:13,19:32:53.51:539,0,54	0/1:7,6:13:50.27:216,0,50	0/1:3,8:10:5.62:236,0,6	0/0:32,0:32:80.80:0,81,810	0/0:19,0:19:57.13:0,57,581	0/0:26,0:26:75.17:0,75,764	0/0:29,0:29:81.18:0,81,826	0/1:9,9:18:3.59:338,0,4	0/0:25,0:26:74.18:0,74,733	0/1:5,8:13:17.84:177,0,18	0/0:18,0:18:48.11:0,48,489	0/0:18,0:18:54.11:0,54,543	0/0:27,0:27:72.13:0,72,726	0/1:4,2:6:25.94:94,0,26	0/0:20,0:20:51.11:0,51,520	0/0:33,0:33:87.18:0,87,880	0/0:1,0:1:3.01:0,3,31	1/1:3,11:15:9.77:385,10,0	0/0:22,0:22:63.13:0,63,636	0/0:9,0:9:27.06:0,27,275	0/0:19,0:19:54.10:0,54,538	0/0:23,0:23:69.16:0,69,704	0/0:29,0:29:84.19:0,84,856	0/0:13,0:13:36.08:0,36,367
chr10	88841326	.	G	GTTTTTTT	4167.80	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.649;DP=530;FS=0.428;HRun=7;HaplotypeScore=126.9644;InbreedingCoeff=0.9491;MQ=66.11;MQ0=1;MQRankSum=-10.241;QD=41.68;ReadPosRankSum=-1.999;VQSLOD=-0.0531;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.02:0,54,991	0/0:6,0:6:15.05:0,15,283	0/0:13,0:8:10.10:0,10,202	0/0:21,0:17:4.82:0,5,226	1/1:21,4:26:65.70:1063,66,0	1/1:10,3:14:42.08:717,42,0	1/1:7,1:9:24.03:445,24,0	0/0:33,0:33:66.76:0,67,1078	0/0:21,0:21:59.99:0,60,972	0/0:25,0:25:60.01:0,60,1022	0/0:29,0:29:84.14:0,84,1493	1/1:10,3:13:34.13:590,34,0	0/0:24,0:24:61.90:0,62,1059	1/1:14,2:16:38.80:487,39,0	0/0:13,0:13:36.10:0,36,716	0/0:19,0:19:51.09:0,51,906	0/0:31,0:31:87.09:0,87,1524	1/1:5,1:6:12.04:236,12,0	0/0:20,0:20:38.96:0,39,545	0/0:29,0:29:78.01:0,78,1224	0/0:3,0:3:9:0,9,115	1/1:12,3:15:36.48:629,36,0	0/0:24,0:24:69.07:0,69,1184	0/0:10,0:10:30.07:0,30,565	0/0:21,0:22:62.99:0,63,999	0/0:25,0:25:63.14:0,63,1169	0/0:31,0:31:84.07:0,84,1439	0/0:12,0:12:35.95:0,36,521
chr10	88842345	.	T	TAAAA	5166.56	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-5.368;DP=595;FS=0.427;HRun=9;HaplotypeScore=126.6849;InbreedingCoeff=0.8831;MQ=72.43;MQ0=0;MQRankSum=-7.576;QD=38.85;ReadPosRankSum=-3.775;VQSLOD=2.5559;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:58.44:0,58,836	0/0:9,0:9:27.09:0,27,395	0/0:15,0:15:36.08:0,36,488	0/1:15,0:14:23.22:23,0,89	0/0:31,0:31:76.08:0,76,1059	0/0:25,0:25:66.18:0,66,946	0/0:9,0:9:18.03:0,18,263	1/1:14,20:36:81.28:1835,81,0	0/0:14,0:14:30.06:0,30,439	0/0:29,0:29:72.12:0,72,1005	0/0:23,0:23:51.11:0,51,726	0/0:21,0:21:54.15:0,54,785	0/0:22,0:22:66.22:0,66,962	0/0:27,0:27:69.18:0,69,989	0/0:20,0:20:57.19:0,57,832	0/0:11,0:11:24.06:0,24,349	0/0:24,0:24:63.15:0,63,897	0/0:12,0:12:21.44:0,21,286	0/0:26,0:26:63.11:0,63,895	0/0:31,0:32:87.24:0,87,1232	1/1:2,8:10:24.08:512,24,0	0/0:26,0:26:72.19:0,72,1032	0/0:19,0:19:45.09:0,45,658	0/0:12,0:12:33.11:0,33,483	1/1:2,0:24:66.12:807,66,0	1/1:7,19:28:25.33:1400,25,0	0/0:34,0:34:87.24:0,87,1250	1/1:3,15:20:27.09:589,27,0
chr10	88843104	.	AC	A	2882.49	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=14.144;DP=490;FS=3.811;HRun=1;HaplotypeScore=82.0427;InbreedingCoeff=0.8020;MQ=61.78;MQ0=8;MQRankSum=-10.005;QD=14.86;ReadPosRankSum=-3.305;VQSLOD=2.1737;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:67.22:0,67,935	0/0:5,0:5:15.05:0,15,199	0/0:14,0:5:12.02:0,12,141	0/1:23,0:17:15.65:16,0,188	1/1:6,17:19:37.46:376,37,0	1/1:3,14:16:45.12:597,45,0	1/1:0,10:10:27.09:370,27,0	1/1:18,0:15:8.43:66,8,0	0/0:12,0:12:36.08:0,36,445	0/0:24,0:22:63.04:0,63,750	0/0:29,0:29:87.26:0,87,1122	1/1:1,14:14:30.01:344,30,0	0/0:22,0:21:63.16:0,63,789	1/1:7,12:18:53.87:572,54,0	0/0:20,0:20:60.11:0,60,706	0/0:14,0:13:39.07:0,39,468	0/0:28,0:27:72.11:0,72,854	1/1:5,7:11:32.99:363,33,0	0/0:19,0:18:54.06:0,54,629	0/0:20,0:20:57.02:0,57,651	1/1:5,0:5:5.01:31,5,0	1/1:4,5:8:20.91:220,21,0	0/0:19,0:19:56.98:0,57,691	0/0:17,0:14:39.10:0,39,502	1/1:14,0:14:9.23:41,9,0	0/1:19,0:17:57.70:83,0,58	0/0:21,0:21:63.10:0,63,726	1/1:8,0:7:7.46:21,7,0
chr10	88843109	.	A	AG	747.78	PASS	AB=0.890;AC=16;AF=0.286;AN=56;BaseQRankSum=12.441;DP=488;FS=3.512;HRun=0;HaplotypeScore=93.4501;InbreedingCoeff=0.6519;MQ=62.77;MQ0=6;MQRankSum=-11.413;QD=5.62;ReadPosRankSum=0.273;VQSLOD=3.4703;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:35:78.64:0,79,1111	0/0:5,0:5:15.05:0,15,210	0/0:17,0:7:12.03:0,12,143	0/0:25,0:17:14.33:0,14,356	1/1:22,0:18:15.10:96,15,0	1/1:20,0:19:47.02:246,47,0	1/1:10,0:10:24.32:116,24,0	0/0:19,0:16:7.93:0,8,61	0/0:14,0:14:42.12:0,42,541	0/0:23,0:22:63.20:0,63,850	0/0:29,0:29:87.27:0,87,1186	1/1:17,0:16:17.87:100,18,0	0/0:21,0:21:63.20:0,63,865	0/1:18,0:17:8.10:116,0,8	0/0:17,0:17:51.15:0,51,679	0/0:12,0:11:33.11:0,33,461	0/0:26,0:25:66.17:0,66,881	1/1:11,0:10:12.52:107,13,0	0/0:18,0:17:51.16:0,51,690	0/0:18,0:18:51.16:0,51,696	0/1:5,0:5:3.36:3,0,7	1/1:8,0:7:4.14:40,4,0	0/0:20,0:20:57.10:0,57,766	0/0:17,0:14:42.13:0,42,569	0/1:3,11:14:21.89:103,0,22	0/0:19,0:17:11.21:0,11,170	0/0:20,0:20:60.17:0,60,788	0/1:8,0:7:4.94:5,0,68
chr10	88843115	.	AAAAC	A	3627.81	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=12.699;DP=492;FS=0.000;HRun=0;HaplotypeScore=113.2222;InbreedingCoeff=0.8380;MQ=64.07;MQ0=5;MQRankSum=-10.977;QD=30.74;ReadPosRankSum=-2.644;VQSLOD=2.8247;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:89.11:0,89,1994	0/0:6,0:6:18.06:0,18,405	0/0:17,0:8:18.79:0,19,264	0/0:25,0:17:41.53:0,42,548	1/1:9,11:18:24.49:373,24,0	1/1:8,11:19:57.09:861,57,0	1/1:9,5:14:36.01:514,36,0	0/0:22,0:19:1.77:0,2,169	0/0:17,0:17:48.14:0,48,887	0/0:27,0:26:75.20:0,75,1476	0/0:26,0:26:78.25:0,78,1819	1/1:9,9:17:42.05:599,42,0	0/0:21,0:21:63.09:0,63,1406	1/1:7,10:17:47.70:656,48,0	0/0:15,0:15:45.15:0,45,1015	0/0:12,0:11:33.11:0,33,732	0/0:27,0:26:66.20:0,66,1441	1/1:7,4:10:10.74:327,11,0	0/0:17,0:16:45.09:0,45,894	0/0:19,0:19:51.03:0,51,926	0/0:4,0:4:5.88:0,6,36	1/1:2,5:7:18.01:285,18,0	0/0:19,0:19:54.09:0,54,1214	0/0:18,0:15:45.15:0,45,990	0/1:12,0:12:13:13,0,75	0/0:20,0:18:9.02:0,9,354	0/0:18,0:18:54.17:0,54,1218	0/0:9,0:8:15.04:0,15,202
chr10	88843117	.	AAC	A	2024.42	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=12.864;DP=491;FS=1.894;HRun=0;HaplotypeScore=100.7036;InbreedingCoeff=0.7447;MQ=64.42;MQ0=4;MQRankSum=-10.667;QD=12.50;ReadPosRankSum=-3.532;VQSLOD=3.0541;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:88.18:0,88,1415	0/0:6,0:6:18.06:0,18,282	0/0:17,0:8:18.78:0,19,217	0/0:24,0:17:28.69:0,29,364	1/1:21,0:19:27.33:208,27,0	1/1:19,0:19:56.78:461,57,0	1/1:11,2:13:34.44:271,34,0	0/1:22,0:19:12.91:96,0,13	0/0:16,0:16:48.15:0,48,744	0/0:27,0:26:75.18:0,75,1115	0/0:26,0:26:78.25:0,78,1233	1/1:17,0:16:41.46:310,41,0	0/0:21,0:21:63.09:0,63,967	1/1:17,0:17:45.45:393,45,0	0/0:15,0:15:45.15:0,45,714	0/0:14,0:13:39.09:0,39,559	0/0:27,0:26:66.18:0,66,1017	1/1:9,2:10:24.56:214,25,0	0/0:17,0:16:45.05:0,45,615	0/0:19,0:19:53.99:0,54,720	1/1:3,0:3:1.36:3,1,0	1/1:7,0:7:17.93:143,18,0	0/0:20,0:20:57.07:0,57,853	0/0:18,0:15:45.13:0,45,692	0/1:12,0:12:3.08:52,0,3	0/1:20,0:18:72.47:72,0,130	0/0:18,0:18:54.17:0,54,850	0/0:9,0:8:6.41:0,6,42
chr10	88843118	.	AC	A	2492.38	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=13.893;DP=480;FS=0.000;HRun=1;HaplotypeScore=88.9732;InbreedingCoeff=0.8202;MQ=64.02;MQ0=4;MQRankSum=-11.115;QD=13.40;ReadPosRankSum=-3.871;VQSLOD=1.1821;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:87.75:0,88,1096	0/0:6,0:6:18.04:0,18,213	0/0:17,0:8:19.61:0,20,183	0/1:23,0:16:13.89:14,0,199	1/1:16,1:15:27.78:230,28,0	1/1:16,3:19:56.83:481,57,0	1/1:13,0:13:35.87:287,36,0	1/1:19,0:16:23.92:199,24,0	0/0:16,0:16:48.12:0,48,577	0/0:26,0:25:75.19:0,75,890	0/0:26,0:26:78.22:0,78,955	1/1:15,2:16:44.98:429,45,0	0/0:21,0:21:63.08:0,63,758	1/1:17,0:17:48.60:429,49,0	0/0:15,0:15:45.06:0,45,545	0/0:14,0:13:39.08:0,39,451	0/0:27,0:26:66.17:0,66,800	1/1:10,1:10:28.16:222,28,0	0/0:17,0:16:44.51:0,45,472	0/0:18,0:18:54:0,54,588	1/1:3,0:3:4.52:24,5,0	1/1:7,0:7:17.95:161,18,0	0/0:20,0:20:59.96:0,60,682	0/0:18,0:15:45.04:0,45,531	1/1:12,0:12:15.70:104,16,0	0/1:19,0:17:68.06:103,0,68	0/0:18,0:18:54.16:0,54,664	1/1:7,2:8:7.33:27,7,0
chr10	88843155	.	A	AT	4299.37	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.228;DP=475;FS=1.895;HRun=1;HaplotypeScore=74.5301;InbreedingCoeff=0.9850;MQ=69.81;MQ0=0;MQRankSum=-5.664;QD=37.39;ReadPosRankSum=-0.118;VQSLOD=5.1241;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.22:0,93,1172	0/0:8,0:8:24.08:0,24,312	0/0:13,0:13:29.98:0,30,319	0/0:4,0:4:8.72:0,9,71	1/1:0,18:18:45.11:648,45,0	1/1:3,18:21:60.12:847,60,0	1/1:1,14:15:36.12:539,36,0	0/0:24,0:24:69.17:0,69,863	0/0:20,0:20:60.20:0,60,779	0/0:24,0:24:72.23:0,72,935	0/0:20,0:20:57.19:0,57,740	1/1:2,15:17:42.13:607,42,0	0/0:20,0:20:57.18:0,57,727	1/1:3,16:19:45.15:672,45,0	0/0:10,0:10:30.10:0,30,389	0/0:17,0:17:51.17:0,51,662	0/0:20,0:20:54.18:0,54,700	1/1:0,14:14:36.12:538,36,0	0/0:21,0:21:63.15:0,63,786	0/0:26,0:26:72.23:0,72,922	0/0:10,0:10:27.07:0,27,324	1/1:0,11:11:30.10:449,30,0	0/0:18,0:18:51.17:0,51,661	0/0:14,0:13:39.13:0,39,505	0/0:11,0:11:33.10:0,33,417	0/0:19,0:19:57.19:0,57,740	0/0:22,0:22:63.19:0,63,803	0/0:8,0:8:15.05:0,15,194
chr10	88844128	.	GT	G	1634.64	PASS	AB=0.748;AC=14;AF=0.250;AN=56;BaseQRankSum=6.959;DP=477;FS=15.395;HRun=12;HaplotypeScore=53.4463;InbreedingCoeff=0.7476;MQ=75.19;MQ0=0;MQRankSum=1.440;QD=11.68;ReadPosRankSum=2.624;VQSLOD=1.5064;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:23:44.92:0,45,435	0/0:7,0:9:23.71:0,24,205	0/0:12,0:12:4.64:0,5,54	0/0:9,0:8:11.57:0,12,75	1/1:8,23:31:36.83:462,37,0	1/1:4,14:19:29.98:294,30,0	0/1:5,7:12:6.54:139,0,7	0/0:30,0:30:53.88:0,54,519	0/0:21,1:23:36.60:0,37,509	0/0:30,0:32:77.80:0,78,744	0/0:12,0:12:24.03:0,24,232	1/1:2,8:10:23.90:186,24,0	0/0:16,0:16:45.08:0,45,449	1/1:6,14:20:13.19:276,13,0	0/0:10,0:10:22.12:0,22,200	0/0:9,0:11:29.89:0,30,283	0/0:15,0:15:39:0,39,375	1/1:2,11:13:23.90:186,24,0	0/1:16,3:19:26.34:26,0,290	0/0:25,1:26:39.81:0,40,564	0/0:6,0:6:18.01:0,18,170	1/1:4,11:15:32.87:255,33,0	0/0:18,1:19:18.79:0,19,351	0/0:5,0:5:12.02:0,12,122	0/0:11,1:14:6.45:0,6,200	0/0:21,1:27:37.38:0,37,494	0/0:25,0:29:46.76:0,47,572	0/0:8,1:9:3.81:0,4,215
chr10	88845166	.	GCTGCTCAGTC	G	9979.67	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.750;DP=609;FS=2.342;HRun=0;HaplotypeScore=178.5033;InbreedingCoeff=0.9936;MQ=78.94;MQ0=0;MQRankSum=-15.464;QD=71.28;ReadPosRankSum=3.434;VQSLOD=5.0788;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.31:0,90,4762	0/0:12,0:12:33.11:0,33,1732	0/0:28,0:28:78.27:0,78,3750	0/0:15,0:15:44.82:0,45,2088	1/1:2,26:28:51.18:1697,51,0	1/1:2,24:26:63.22:2098,63,0	1/1:1,19:20:48.16:1598,48,0	0/0:33,0:32:99:0,99,4748	0/0:21,0:21:60.21:0,60,3195	0/0:42,0:42:99:0,123,6314	0/0:20,0:20:60.21:0,60,2977	1/1:1,8:9:24.08:799,24,0	0/0:15,0:15:45.15:0,45,2353	1/1:1,17:18:42.14:1398,42,0	0/0:26,0:26:75.26:0,75,3794	0/0:25,0:25:72.25:0,72,3814	0/0:25,0:25:69.22:0,69,3374	1/1:1,9:10:12.04:400,12,0	0/0:18,0:18:54.19:0,54,2590	0/0:30,0:30:90.31:0,90,4804	0/0:13,0:13:39.13:0,39,1932	1/1:2,27:29:60.21:1990,60,0	0/0:23,0:23:66.23:0,66,3278	0/0:15,0:15:25.16:0,25,2221	0/0:13,0:13:33.11:0,33,1651	0/0:23,0:23:69.24:0,69,3685	0/0:29,0:29:87.30:0,87,4542	0/0:12,0:12:36.12:0,36,1848
chr10	88845475	.	C	CT	4115.54	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-12.808;DP=556;FS=0.000;HRun=1;HaplotypeScore=67.3925;InbreedingCoeff=0.9992;MQ=78.01;MQ0=0;MQRankSum=-1.429;QD=42.00;ReadPosRankSum=0.197;VQSLOD=3.8830;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.23:0,87,1097	0/0:13,0:13:36.10:0,36,453	0/0:20,0:20:34.19:0,34,663	0/0:18,0:18:54.18:0,54,701	0/0:26,0:26:75.24:0,75,973	0/0:26,0:26:78.24:0,78,997	0/0:15,0:15:45.15:0,45,584	1/1:0,15:15:45.15:673,45,0	0/0:28,0:28:81.25:0,81,1038	0/0:15,0:15:45.15:0,45,585	0/0:17,0:17:48.15:0,48,610	0/0:21,0:21:63.20:0,63,818	0/0:17,0:17:48.16:0,48,623	0/0:16,0:16:45.15:0,45,584	0/0:22,0:22:66.19:0,66,840	0/0:20,0:20:57.17:0,57,726	0/0:12,0:12:36.12:0,36,467	0/0:9,0:9:27.09:0,27,350	0/0:26,0:26:78.25:0,78,1013	0/0:25,0:25:72.23:0,72,935	1/1:1,17:18:42.13:610,42,0	0/0:21,0:21:57.19:0,57,739	0/0:21,0:21:63.20:0,63,818	0/0:8,0:8:24.08:0,24,311	1/1:0,22:22:66.22:989,66,0	1/1:0,28:28:84.21:1190,84,0	0/0:33,0:33:99:0,99,1271	1/1:1,14:15:45.14:653,45,0
chr10	88846611	.	TTCTCTCTCTCTCTCTC	T	88.94	PASS	AB=1.000;AC=7;AF=0.175;AN=40;BaseQRankSum=2.733;DP=503;FS=10.613;HRun=0;HaplotypeScore=202.1593;InbreedingCoeff=0.3861;MQ=60.82;MQ0=15;MQRankSum=2.996;QD=1.13;ReadPosRankSum=2.471;VQSLOD=2.1336;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:24:3.18:3,0,289	./.	./.	0/0:27,0:15:0.47:0,0,2	./.	0/0:9,1:10:2.99:0,3,24	1/1:17,0:16:6.02:70,6,0	0/0:29,0:29:6.44:0,6,42	0/0:16,0:16:10.26:0,10,197	0/0:18,0:17:6.96:0,7,49	./.	1/1:16,2:18:8.51:72,9,0	0/0:16,0:16:12.03:0,12,380	./.	0/0:22,0:21:6.02:0,6,252	0/0:21,0:21:6.02:0,6,267	0/0:13,0:12:9.01:0,9,168	./.	0/0:18,0:17:8.52:0,9,372	0/0:30,0:30:3.01:0,3,201	0/0:20,0:20:3.01:0,3,57	./.	0/0:18,0:18:3.01:0,3,43	0/0:24,0:21:6.02:0,6,294	1/1:18,0:18:3.01:52,3,0	0/0:21,0:21:7.26:0,7,105	0/0:11,0:10:18.06:0,18,803	./.
chr10	88846678	.	GCACACACACACACACACA	G	2674.24	PASS	AB=0.727;AC=13;AF=0.232;AN=56;BaseQRankSum=4.650;DP=460;FS=4.836;HRun=0;HaplotypeScore=169.3781;InbreedingCoeff=0.7140;MQ=40.80;MQ0=39;MQRankSum=-7.223;QD=20.89;ReadPosRankSum=-3.267;VQSLOD=1.6701;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:33:12.68:0,13,898	0/0:8,0:8:18.06:0,18,1475	0/0:19,0:2:6.02:0,6,383	0/0:21,0:3:9.03:0,9,606	1/1:9,7:16:3.01:148,3,0	1/1:9,12:22:13.59:353,14,0	1/1:13,7:19:12.88:136,13,0	0/0:10,0:13:33.08:0,33,1148	0/0:7,0:17:6.02:0,6,353	0/0:14,0:14:42.14:0,42,2755	0/0:9,0:8:18.06:0,18,1430	1/1:10,6:15:15.05:608,15,0	0/0:20,0:22:45.15:0,45,3522	1/1:7,15:22:24.55:944,25,0	0/0:20,0:18:34.36:0,34,2682	0/0:13,0:13:33.11:0,33,2349	0/0:18,0:19:41.16:0,41,3191	0/1:5,3:8:26.44:432,0,26	0/0:6,0:5:9:0,9,211	0/0:8,0:9:11.08:0,11,888	0/0:11,0:11:2.98:0,3,21	1/1:12,10:22:15.01:227,15,0	0/0:10,0:9:13.06:0,13,1269	0/0:26,0:24:40.20:0,40,3508	0/0:10,0:17:5.09:0,5,212	0/0:6,0:13:28.34:0,28,897	0/0:8,0:9:18.06:0,18,1414	0/0:0,0:4:9.03:0,9,188
chr10	88848585	.	AT	A	14700.78	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.823;DP=582;FS=1.727;HRun=7;HaplotypeScore=58.9837;InbreedingCoeff=0.9843;MQ=77.09;MQ0=0;MQRankSum=-7.393;QD=26.73;ReadPosRankSum=4.347;VQSLOD=5.4475;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:48.11:490,48,0	1/1:0,16:16:48.11:490,48,0	0/0:17,0:17:21.30:0,21,525	0/0:15,0:15:21.05:0,21,254	1/1:3,25:28:75.17:765,75,0	1/1:0,24:24:63.14:643,63,0	1/1:0,12:12:33.08:337,33,0	1/1:3,31:34:93.17:935,93,0	1/1:1,21:22:60.14:612,60,0	1/1:5,28:33:81.15:814,81,0	1/1:0,24:24:69.16:704,69,0	1/1:2,14:16:42.09:429,42,0	1/1:1,9:10:27.06:275,27,0	1/1:1,16:17:48.11:490,48,0	1/1:2,18:20:51.11:520,51,0	1/1:3,16:19:48.11:490,48,0	1/1:0,17:17:51.12:520,51,0	1/1:2,12:14:19.88:321,20,0	1/1:1,16:17:48.11:489,48,0	1/1:3,31:34:84.18:857,84,0	1/1:0,6:6:15.03:153,15,0	1/1:0,22:22:57.12:582,57,0	1/1:1,20:21:48.08:489,48,0	1/1:1,14:15:39.09:398,39,0	1/1:2,16:18:45.09:459,45,0	1/1:1,28:29:81.16:818,81,0	1/1:2,26:28:72.16:734,72,0	1/1:3,33:36:87.19:887,87,0
chr10	88848783	.	ATGGTC	A	1726.75	PASS	AB=0.743;AC=5;AF=0.089;AN=56;BaseQRankSum=6.584;DP=710;FS=1.287;HRun=0;HaplotypeScore=168.1696;InbreedingCoeff=-0.0981;MQ=68.97;MQ0=1;MQRankSum=-8.999;QD=13.28;ReadPosRankSum=-2.324;VQSLOD=3.0593;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.28:0,81,2436	0/0:12,0:12:36.12:0,36,1117	0/0:23,0:20:55.43:0,55,1531	0/0:28,0:30:74.42:0,74,2102	0/0:22,0:22:66.19:0,66,1929	0/0:34,0:34:99:0,102,3122	0/0:19,0:19:57.17:0,57,1736	0/1:22,16:38:99:1090,0,831	0/0:29,0:29:87.28:0,87,2567	0/0:39,0:39:99:0,111,3344	0/0:27,0:27:81.28:0,81,2475	0/0:22,0:22:66.18:0,66,1877	0/0:23,0:23:63.22:0,63,1932	0/0:23,0:23:69.23:0,69,2118	0/0:32,0:32:96.32:0,96,2975	0/0:17,0:17:48.16:0,48,1524	0/0:20,0:20:60.19:0,60,1786	0/0:9,0:9:27.09:0,27,784	0/0:24,0:24:72.25:0,72,2119	0/0:34,0:34:99:0,99,3050	0/1:14,10:24:99:242,0,294	0/0:22,0:22:66.23:0,66,2094	0/0:20,0:20:60.20:0,60,1764	0/0:31,0:31:90.31:0,90,2809	0/1:16,6:22:99:243,0,576	0/1:31,3:34:99:155,0,1320	0/0:38,0:38:99:0,114,3325	0/1:4,8:12:99:115,0,136
chr10	88848785	.	G	GTTCTCTCCT	9901.99	PASS	AB=0.625;AC=9;AF=0.161;AN=56;BaseQRankSum=12.553;DP=711;FS=6.089;HRun=0;HaplotypeScore=206.7870;InbreedingCoeff=0.8628;MQ=67.11;MQ0=1;MQRankSum=-15.369;QD=75.02;ReadPosRankSum=-1.754;VQSLOD=4.0605;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.28:0,81,2458	0/0:12,0:12:36.12:0,36,1159	0/0:22,0:19:55.42:0,55,1505	0/0:28,0:28:78.03:0,78,2106	0/0:24,0:24:69.18:0,69,2003	0/0:34,0:34:99:0,102,3187	0/0:19,0:19:57.17:0,57,1775	1/1:32,4:37:99:2509,110,0	0/0:30,0:30:90.28:0,90,2634	0/0:37,0:37:99:0,111,3403	0/0:28,0:28:84.28:0,84,2563	0/0:22,0:22:66.18:0,66,1904	0/0:21,0:21:63.22:0,63,1967	0/0:23,0:23:69.23:0,69,2170	0/0:32,0:32:96.32:0,96,3006	0/0:16,0:16:48.16:0,48,1492	0/0:21,0:21:63.19:0,63,1851	0/0:9,0:9:27.09:0,27,790	0/0:25,0:25:72.25:0,72,2196	0/0:34,0:34:99:0,102,3150	1/1:16,9:25:30.88:1383,31,0	0/0:22,0:22:66.23:0,66,2135	0/0:21,0:21:60.20:0,60,1797	0/0:31,0:31:90.31:0,90,2865	1/1:10,14:24:60.21:2284,60,0	0/1:14,20:35:99:3273,0,142	0/0:39,0:39:99:0,117,3415	1/1:9,2:11:15.05:453,15,0
chr10	88848786	.	G	GT	978.02	PASS	AB=0.791;AC=7;AF=0.125;AN=56;BaseQRankSum=11.022;DP=708;FS=1.050;HRun=1;HaplotypeScore=112.6655;InbreedingCoeff=0.4883;MQ=66.47;MQ0=1;MQRankSum=-9.299;QD=7.41;ReadPosRankSum=0.773;VQSLOD=0.7518;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.26:0,81,1051	0/0:12,0:12:36.12:0,36,464	0/0:22,0:19:39.22:0,39,646	0/0:27,0:27:65.58:0,66,922	0/0:23,0:23:69.17:0,69,850	0/0:35,0:35:99:0,99,1285	0/0:18,0:18:54.18:0,54,701	0/1:33,4:37:44.33:44,0,111	0/0:30,0:30:87.27:0,87,1114	0/0:37,0:37:99:0,108,1401	0/0:29,0:29:84.06:0,84,1064	0/0:20,0:20:60.18:0,60,764	0/0:21,0:21:63.20:0,63,817	0/0:24,0:24:66.21:0,66,857	0/0:31,0:31:93.30:0,93,1207	0/0:16,0:16:48.16:0,48,623	0/0:20,0:20:60.17:0,60,763	0/0:9,0:9:27.09:0,27,350	0/0:25,0:25:75.22:0,75,957	0/0:34,0:34:99:0,102,1290	1/1:16,9:25:4.66:184,5,0	0/0:23,0:23:66.21:0,66,857	0/0:21,0:21:63.19:0,63,801	0/0:31,0:31:90.29:0,90,1168	1/1:10,14:24:12.29:353,12,0	0/1:14,21:35:45.51:491,0,46	0/0:39,0:39:99:0,108,1387	0/1:9,2:11:5.64:37,0,6
chr10	88849266	.	TA	T	10569.99	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=16.490;DP=587;FS=9.715;HRun=7;HaplotypeScore=80.3704;InbreedingCoeff=0.9927;MQ=67.22;MQ0=0;MQRankSum=-4.019;QD=28.26;ReadPosRankSum=2.317;VQSLOD=5.2184;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:57.12:582,57,0	1/1:0,8:7:21.05:214,21,0	0/0:13,0:13:17.25:0,17,257	0/0:7,0:6:12.04:0,12,151	1/1:3,36:39:99:1040,102,0	1/1:3,15:18:45.10:459,45,0	1/1:0,16:16:48.11:490,48,0	1/1:0,31:31:93.21:948,93,0	1/1:0,15:15:45.10:459,45,0	1/1:2,29:31:84.19:857,84,0	1/1:1,30:31:84.19:857,84,0	1/1:0,22:22:66.15:673,66,0	0/0:20,0:20:54.17:0,54,679	1/1:0,13:13:39.09:398,39,0	0/0:21,0:21:60.17:0,60,727	0/0:19,0:20:57:0,57,682	1/1:2,18:20:48.10:490,48,0	1/1:2,8:10:24.05:245,24,0	0/0:18,0:18:54.17:0,54,679	0/0:31,0:31:84.26:0,84,1044	1/1:0,10:10:24.05:245,24,0	1/1:4,21:25:69.15:703,69,0	0/0:36,0:36:99:0,108,1339	0/0:15,0:15:42.13:0,42,528	1/1:2,26:28:81.17:820,81,0	1/1:2,19:21:63.14:642,63,0	0/0:32,0:32:93.27:0,93,1142	1/1:1,14:15:45.07:450,45,0
chr10	88849318	.	A	AT	7802.93	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=6.729;DP=598;FS=3.313;HRun=7;HaplotypeScore=100.7939;InbreedingCoeff=0.9937;MQ=69.88;MQ0=0;MQRankSum=-4.265;QD=29.56;ReadPosRankSum=-2.087;VQSLOD=3.7610;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.03:0,39,368	0/0:11,0:11:33.02:0,33,311	0/0:7,0:7:12.01:0,12,114	0/0:11,0:11:27.03:0,27,254	1/1:10,30:40:99:1171,99,0	1/1:2,24:26:69.21:833,69,0	1/1:7,6:13:27.07:315,27,0	1/1:5,30:36:93.10:1064,93,0	0/0:14,0:14:33.05:0,33,319	0/0:32,0:32:93.12:0,93,886	0/0:32,1:33:59.95:0,60,862	1/1:4,17:21:51.16:616,51,0	0/0:19,0:19:57.07:0,57,540	1/1:2,10:12:30.09:362,30,0	0/0:29,0:29:81.13:0,81,782	0/0:18,0:18:42.06:0,42,406	0/0:25,0:25:63.06:0,63,597	1/1:1,11:12:33.10:399,33,0	0/0:13,0:13:32.35:0,32,317	0/0:31,0:31:75.11:0,75,724	1/1:1,9:10:24.06:280,24,0	1/1:4,22:26:60.18:724,60,0	0/0:33,0:33:87.08:0,87,822	0/0:9,0:9:18.02:0,18,174	1/1:3,24:27:69.17:817,69,0	1/1:6,21:27:75.20:881,75,0	0/0:36,0:36:99:0,102,977	1/1:6,8:14:30.07:340,30,0
chr10	88849731	.	AAGG	A	681.75	PASS	AB=0.920;AC=11;AF=0.204;AN=54;BaseQRankSum=9.774;DP=514;FS=7.970;HRun=0;HaplotypeScore=182.9794;InbreedingCoeff=-0.0724;MQ=46.43;MQ0=6;MQRankSum=-7.251;QD=3.28;ReadPosRankSum=-0.660;VQSLOD=1.8502;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:25.51:26,0,219	0/1:7,1:8:21.83:22,0,244	0/0:8,0:1:3.01:0,3,66	0/0:6,0:1:3.01:0,3,56	0/1:17,4:21:20.80:21,0,135	0/0:20,0:19:24.19:0,24,162	0/1:12,0:11:14.34:14,0,52	0/0:6,0:4:7.83:0,8,34	1/1:10,7:17:31.87:336,32,0	0/1:29,3:30:0.92:1,0,1130	0/1:19,1:20:44.35:44,0,439	0/0:14,0:14:26.74:0,27,225	0/0:26,0:26:78.16:0,78,1722	0/0:13,0:13:23.35:0,23,186	0/0:26,0:26:78.08:0,78,1639	0/0:13,1:14:8.15:0,8,834	0/1:21,4:25:36.55:37,0,855	0/0:5,0:5:4.27:0,4,59	0/0:15,0:14:42.09:0,42,835	0/0:41,0:40:99:0,120,2568	./.	0/0:17,0:17:4.02:0,4,159	0/0:22,0:22:60.20:0,60,1304	0/0:35,0:35:94.96:0,95,1974	0/1:27,0:27:57.55:179,0,58	0/1:18,5:22:77.28:146,0,77	0/0:22,0:22:66.22:0,66,1464	0/0:15,0:15:18.34:0,18,149
chr10	88849753	.	GGA	G	265.93	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=8.426;DP=547;FS=0.665;HRun=0;HaplotypeScore=177.6706;InbreedingCoeff=0.5386;MQ=51.71;MQ0=5;MQRankSum=-6.386;QD=5.02;ReadPosRankSum=2.132;VQSLOD=3.0225;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:45.15:0,45,885	0/0:10,0:10:27.09:0,27,510	0/0:24,0:14:41.93:0,42,693	0/0:17,0:11:29.66:0,30,530	0/0:26,0:26:38.15:0,38,406	0/0:20,0:19:50.05:0,50,323	0/0:14,0:14:32.98:0,33,272	0/0:12,0:11:32.22:0,32,264	0/0:19,0:19:54.16:0,54,838	0/0:31,0:29:81.28:0,81,1503	0/0:18,0:18:45.11:0,45,794	0/0:11,0:11:24.44:0,24,174	0/0:27,0:27:81.27:0,81,1504	0/0:15,0:15:40.62:0,41,325	0/0:25,0:25:75.26:0,75,1470	0/0:17,0:17:51.17:0,51,960	0/0:25,0:25:63.17:0,63,1158	0/0:9,0:9:24.84:0,25,166	0/0:15,0:15:45.15:0,45,856	0/0:39,0:39:99:0,117,2301	0/0:1,0:1:3:0,3,28	0/0:18,0:18:42.81:0,43,365	0/0:21,0:21:60.21:0,60,1199	0/0:29,0:29:87.26:0,87,1607	1/1:6,23:29:10.86:309,11,0	0/1:24,0:23:55.44:55,0,271	0/0:20,0:20:60.17:0,60,1117	0/0:11,0:11:29.60:0,30,212
chr10	88849757	.	GGA	G	349.03	PASS	AB=0.955;AC=3;AF=0.054;AN=56;BaseQRankSum=8.586;DP=553;FS=0.000;HRun=0;HaplotypeScore=173.3535;InbreedingCoeff=0.5716;MQ=52.59;MQ0=5;MQRankSum=-7.268;QD=6.98;ReadPosRankSum=1.778;VQSLOD=3.0705;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:48.12:0,48,885	0/0:9,0:9:27.06:0,27,470	0/0:26,0:16:48.16:0,48,808	0/0:18,0:12:32.63:0,33,548	0/0:27,0:27:64.33:0,64,659	0/0:22,0:21:58.67:0,59,537	0/0:15,0:15:42.72:0,43,413	0/0:17,0:16:40.31:0,40,302	0/0:19,0:19:54.15:0,54,823	0/0:31,0:29:84.26:0,84,1467	0/0:18,0:18:42.14:0,42,748	0/0:10,0:10:26.31:0,26,233	0/0:24,0:24:72.25:0,72,1385	0/0:17,0:17:50.26:0,50,458	0/0:24,0:24:72.22:0,72,1373	0/0:18,0:18:54.18:0,54,987	0/0:24,0:24:63.22:0,63,1158	0/0:11,0:11:30.81:0,31,282	0/0:14,0:14:39.13:0,39,770	0/0:37,0:37:99:0,111,2157	0/0:1,0:1:3:0,3,28	0/0:17,0:17:50.87:0,51,515	0/0:24,0:24:69.23:0,69,1303	0/0:31,0:31:83.55:0,84,1547	1/1:5,24:29:23.74:338,24,0	0/1:19,1:20:99:116,0,176	0/0:19,0:19:57.18:0,57,1079	0/0:11,0:11:28.24:0,28,209
chr10	88850066	.	AT	A	2923.01	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.636;DP=476;FS=3.854;HRun=5;HaplotypeScore=58.6991;InbreedingCoeff=0.9757;MQ=59.95;MQ0=0;MQRankSum=1.729;QD=28.38;ReadPosRankSum=2.141;VQSLOD=3.9920;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:54.15:612,54,0	1/1:0,13:13:39.11:442,39,0	0/0:7,0:7:21.07:0,21,280	0/0:10,0:9:23.86:0,24,271	0/0:35,0:35:96.24:0,96,1240	0/0:15,0:15:45.14:0,45,599	0/0:9,0:9:21.07:0,21,283	0/0:30,0:30:78.25:0,78,1052	1/1:1,11:12:30.09:340,30,0	1/1:1,17:18:51.14:578,51,0	1/1:0,22:22:63.10:697,63,0	0/0:10,0:10:30.08:0,30,380	0/0:13,0:13:36.11:0,36,478	0/0:12,0:12:36.08:0,36,444	0/0:15,0:15:45.14:0,45,599	0/0:12,0:12:33.11:0,33,451	1/1:1,14:15:39.11:442,39,0	0/0:32,0:32:84.24:0,84,1126	0/0:20,0:20:57.18:0,57,766	0/0:25,0:25:69.23:0,69,940	0/0:2,0:2:6.02:0,6,82	0/0:15,0:15:42.13:0,42,557	0/0:23,0:23:69.14:0,69,919	0/0:12,0:12:33.10:0,33,436	0/0:23,0:23:54.17:0,54,720	0/0:22,1:23:32.19:0,32,827	0/0:22,0:22:60.18:0,60,803	0/0:8,0:8:21.07:0,21,287
chr10	88850539	.	TACACAC	T	5089.38	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=1.368;DP=554;FS=3.851;HRun=0;HaplotypeScore=143.7703;InbreedingCoeff=0.6999;MQ=58.47;MQ0=8;MQRankSum=-10.302;QD=22.32;ReadPosRankSum=0.866;VQSLOD=4.7455;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:26.82:0,27,554	0/0:7,0:8:18.02:0,18,374	0/0:26,0:17:12:0,12,120	0/0:33,0:20:11.96:0,12,94	0/0:27,0:27:21.15:0,21,110	0/0:15,0:15:9.87:0,10,51	0/1:20,0:19:34.27:34,0,72	0/0:28,0:27:25.34:0,25,233	0/0:29,0:30:63.61:0,64,1485	0/0:21,0:22:44.70:0,45,991	0/0:27,0:31:66.13:0,66,1533	0/1:16,0:16:18.04:28,0,18	1/1:1,15:17:39.13:788,39,0	0/0:18,0:17:12.65:0,13,53	1/1:8,12:20:30.10:622,30,0	1/1:7,12:21:39.13:758,39,0	0/0:22,0:22:14.93:0,15,861	0/0:7,0:7:7.31:0,7,46	1/1:8,5:12:10.72:254,11,0	1/1:6,15:21:33.11:651,33,0	0/0:16,0:14:6.94:0,7,56	0/1:17,0:17:8:44,0,8	1/1:3,17:22:27.09:519,27,0	1/1:7,9:16:17.85:324,18,0	1/1:19,0:19:12.02:152,12,0	0/0:15,0:15:10.37:0,10,50	1/1:6,18:25:45.63:914,46,0	0/0:8,0:8:4.23:0,4,26
chr10	88850564	.	ACACACACACT	A	855.54	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-4.504;DP=629;FS=0.000;HRun=0;HaplotypeScore=209.8273;InbreedingCoeff=0.0290;MQ=55.43;MQ0=17;MQRankSum=-1.275;QD=5.56;ReadPosRankSum=-4.177;VQSLOD=1.4383;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:23.01:0,23,993	0/0:10,0:10:24.04:0,24,772	0/0:30,0:11:18.33:0,18,131	0/0:50,0:18:32.59:0,33,450	0/0:23,0:23:18.05:0,18,233	0/0:18,0:17:9.03:0,9,122	0/0:19,0:18:9.91:0,10,124	0/1:28,0:27:99:207,0,245	0/0:33,0:33:87.68:0,88,3078	0/0:27,0:27:75.01:0,75,2344	0/0:30,0:30:84.20:0,84,3143	0/1:19,0:19:27.31:27,0,72	0/0:21,0:21:33.34:0,33,376	0/0:21,0:20:15.02:0,15,173	0/0:23,0:23:56.19:0,56,499	0/0:19,0:19:7.46:0,7,266	0/0:27,0:26:42.42:0,42,1932	0/1:12,0:12:56.72:57,0,151	0/0:20,0:17:17.95:0,18,296	0/0:21,0:21:42.71:0,43,366	0/1:28,0:26:99:135,0,104	0/0:15,0:15:6.90:0,7,75	0/1:24,0:24:54.55:55,0,269	0/0:18,0:17:26.30:0,26,181	1/1:6,10:16:11.03:333,11,0	0/1:22,0:22:99:157,0,295	0/0:31,0:31:47.51:0,48,535	0/1:5,0:5:28.96:29,0,90
chr10	88850570	.	ACACT	A	3819.12	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=2.853;DP=644;FS=0.359;HRun=0;HaplotypeScore=150.3275;InbreedingCoeff=0.3171;MQ=55.94;MQ0=14;MQRankSum=-8.893;QD=8.70;ReadPosRankSum=3.845;VQSLOD=2.6342;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:38.40:0,38,623	0/0:10,0:10:24.01:0,24,409	0/0:36,0:14:15.73:0,16,158	0/0:49,0:19:21.02:0,21,260	1/1:3,19:22:18.06:339,18,0	1/1:2,17:18:9.03:169,9,0	1/1:3,16:18:12.04:205,12,0	1/1:26,0:25:10.64:392,11,0	0/0:32,0:32:90.09:0,90,1585	0/0:28,0:28:50.13:0,50,1194	0/0:29,0:29:84.08:0,84,1607	1/1:1,18:19:9.03:148,9,0	0/1:21,0:21:49.27:129,0,49	1/1:2,21:22:15.05:280,15,0	0/1:24,0:24:64.18:64,0,202	0/1:21,0:21:62.82:99,0,63	0/1:27,0:27:3.80:4,0,922	1/1:13,0:13:36.01:262,36,0	0/1:16,0:15:23.86:24,0,151	0/1:22,0:22:88.02:88,0,96	1/1:30,0:28:47.85:395,48,0	1/1:1,16:17:9.03:149,9,0	0/1:28,0:28:59.78:60,0,136	0/1:19,0:18:49.03:49,0,86	1/1:13,0:13:11.98:129,12,0	1/1:22,2:24:69.60:632,70,0	0/1:31,0:31:99:103,0,147	1/1:5,0:5:14.32:100,14,0
chr10	88853066	.	G	GA	5125.08	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-12.853;DP=594;FS=6.987;HRun=7;HaplotypeScore=58.7336;InbreedingCoeff=0.9772;MQ=70.22;MQ0=0;MQRankSum=1.387;QD=29.12;ReadPosRankSum=0.689;VQSLOD=5.4066;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:35.93:0,36,334	0/0:3,0:3:6.01:0,6,58	0/0:19,0:18:33.01:0,33,306	0/0:22,0:22:40.55:0,41,386	0/0:34,0:34:93.60:0,94,913	0/0:23,0:23:66.09:0,66,632	0/0:14,0:14:36.06:0,36,348	0/0:31,0:31:80.47:0,80,746	0/0:23,0:23:66.09:0,66,631	0/0:27,0:27:72.11:0,72,695	0/0:26,0:26:66.10:0,66,637	0/0:23,0:23:63.05:0,63,593	1/1:5,15:20:39.12:467,39,0	0/0:17,0:17:48.07:0,48,463	1/1:2,14:16:39.12:471,39,0	1/1:1,27:28:78.24:940,78,0	0/0:25,0:25:49.56:0,50,450	0/0:15,0:15:32.98:0,33,307	1/1:2,16:18:48.08:524,48,0	1/1:6,22:28:75.18:876,75,0	0/0:19,0:19:57.09:0,57,550	0/0:15,0:15:36.03:0,36,342	1/1:1,23:24:60.18:725,60,0	1/1:0,4:4:12.04:145,12,0	0/0:19,0:19:48.05:0,48,457	0/0:24,0:24:66.10:0,66,637	1/1:7,31:38:81.25:977,81,0	0/0:21,0:21:63.10:0,63,608
chr10	88853256	.	AT	A	3225.28	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=14.431;DP=520;FS=8.006;HRun=7;HaplotypeScore=67.4856;InbreedingCoeff=0.8804;MQ=69.28;MQ0=1;MQRankSum=-1.948;QD=22.40;ReadPosRankSum=1.987;VQSLOD=3.4484;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:40.68:0,41,495	0/0:9,0:9:27.09:0,27,339	0/1:12,0:12:7.20:7,0,123	0/0:7,0:7:5.68:0,6,59	1/1:7,22:29:75.14:751,75,0	1/1:3,15:18:42.09:427,42,0	1/1:4,17:21:57.11:573,57,0	0/0:37,0:37:96.30:0,96,1197	0/0:12,0:12:33.11:0,33,415	0/0:26,0:26:69.21:0,69,856	0/0:27,0:27:81.24:0,81,995	1/1:1,17:18:51.11:519,51,0	0/0:17,0:17:48.11:0,48,586	1/1:4,11:15:36.08:367,36,0	0/0:20,0:20:57.18:0,57,717	0/0:13,0:13:39.11:0,39,478	0/0:10,0:10:30.10:0,30,375	1/1:4,7:9:5.71:195,6,0	0/0:15,1:16:42.13:0,42,525	0/0:37,0:37:99:0,102,1281	0/0:7,0:7:21.07:0,21,264	1/1:4,16:20:57.12:581,57,0	0/0:32,0:32:90.29:0,90,1131	0/0:6,0:6:18.06:0,18,226	0/0:26,0:26:67.36:0,67,899	0/0:29,0:29:81.26:0,81,1018	0/0:22,0:22:57.18:0,57,715	0/0:7,0:7:18.06:0,18,226
chr10	88853266	.	TA	T	2997.29	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.544;DP=534;FS=2.283;HRun=8;HaplotypeScore=66.7205;InbreedingCoeff=0.9880;MQ=62.07;MQ0=1;MQRankSum=-0.815;QD=22.88;ReadPosRankSum=2.818;VQSLOD=4.4439;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:27.30:0,27,423	0/0:10,0:10:30.09:0,30,362	0/0:11,0:10:28.83:0,29,273	0/0:7,0:5:10.84:0,11,117	1/1:2,25:27:72.10:692,72,0	1/1:2,13:15:39.06:375,39,0	1/1:2,18:20:51.08:491,51,0	0/0:35,0:35:90.27:0,90,1077	0/0:12,0:12:36.11:0,36,435	0/0:29,0:29:78.23:0,78,932	0/0:32,0:32:81.23:0,81,957	1/1:1,17:18:51.02:481,51,0	0/0:19,0:19:54.12:0,54,617	1/1:2,15:17:39.04:370,39,0	0/0:22,0:22:60.16:0,60,695	0/0:16,0:16:42.11:0,42,486	0/0:9,0:9:24.07:0,24,290	1/1:2,9:9:24.04:231,24,0	0/0:15,0:17:41.99:0,42,476	0/0:36,0:36:99:0,105,1259	0/0:8,0:8:24.06:0,24,277	1/1:2,21:23:59.96:557,60,0	0/0:31,0:31:90.27:0,90,1077	0/0:8,0:8:24.07:0,24,290	0/0:29,0:29:80.91:0,81,942	0/0:28,0:28:75.23:0,75,905	0/0:24,0:24:72.18:0,72,832	0/0:6,0:6:15.05:0,15,181
chr10	88855847	.	CAGAA	C	2688.04	PASS	AB=0.889;AC=29;AF=0.580;AN=50;BaseQRankSum=-2.685;DP=335;FS=5.748;HRun=0;HaplotypeScore=73.5381;InbreedingCoeff=0.6869;MQ=54.23;MQ0=2;MQRankSum=1.575;QD=13.18;ReadPosRankSum=4.496;VQSLOD=1.9630;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,14:25:24.08:368,24,0	1/1:0,0:2:3:28,3,0	./.	./.	0/0:16,0:16:17.83:0,18,188	0/0:5,0:5:9.03:0,9,151	0/0:9,0:9:6.02:0,6,75	0/0:24,0:23:5.93:0,6,40	1/1:3,0:5:6.01:56,6,0	1/1:6,0:18:24:221,24,0	1/1:4,0:14:23.48:179,23,0	0/0:5,0:5:3.01:0,3,52	1/1:7,8:15:15.05:230,15,0	0/0:7,0:7:6.02:0,6,94	1/1:8,6:14:12.04:184,12,0	1/1:2,4:6:6.02:92,6,0	./.	0/0:10,0:10:16.30:0,16,281	1/1:7,8:15:24.08:365,24,0	1/1:13,8:24:26.65:328,27,0	0/0:2,0:3:6.02:0,6,105	0/1:7,1:8:21.68:40,0,22	1/1:11,3:14:3:46,3,0	1/1:8,8:16:15.05:230,15,0	1/1:7,5:12:9.03:138,9,0	0/0:6,0:13:24.08:0,24,407	1/1:6,10:16:24.08:368,24,0	0/0:8,0:10:6.01:0,6,84
chr10	88855898	.	A	AAAGAAAGG	2260.58	PASS	AB=0.907;AC=15;AF=0.268;AN=56;BaseQRankSum=-5.186;DP=417;FS=16.590;HRun=0;HaplotypeScore=120.7685;InbreedingCoeff=0.4628;MQ=62.26;MQ0=2;MQRankSum=-0.418;QD=20.37;ReadPosRankSum=-2.638;VQSLOD=1.2081;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:65.87:0,66,876	0/0:8,0:8:20.89:0,21,204	0/0:12,0:9:11.18:0,11,144	0/0:11,0:10:16.47:0,16,144	1/1:0,9:13:35.86:617,36,0	1/1:0,12:14:9.03:396,9,0	1/1:15,0:15:35.92:363,36,0	0/0:43,0:41:38.72:0,39,703	0/0:8,0:8:20.96:0,21,192	0/0:19,0:19:46.55:0,47,631	0/0:21,0:21:47.76:0,48,452	1/1:0,11:11:3.01:132,3,0	0/0:16,0:16:33.02:0,33,490	1/1:0,9:10:6.02:264,6,0	0/0:11,0:11:27.04:0,27,376	0/0:12,0:12:30.01:0,30,343	0/0:9,0:9:26.90:0,27,215	0/1:14,0:14:99:269,0,111	0/0:26,0:24:65.94:0,66,855	0/0:23,0:23:59.69:0,60,673	0/1:8,0:8:34.68:35,0,148	0/1:1,6:8:44.13:218,0,44	0/0:10,0:10:23.99:0,24,243	0/0:16,0:16:31.84:0,32,437	0/0:10,0:10:24.03:0,24,332	0/1:10,0:10:30.66:60,0,31	0/0:22,0:22:57.05:0,57,791	0/1:8,0:8:81.37:81,0,123
chr10	88855899	.	A	AAG	289.58	PASS	AB=0.988;AC=11;AF=0.196;AN=56;BaseQRankSum=1.521;DP=416;FS=2.990;HRun=0;HaplotypeScore=83.7704;InbreedingCoeff=0.3047;MQ=62.48;MQ0=0;MQRankSum=-5.441;QD=3.33;ReadPosRankSum=-2.796;VQSLOD=1.3682;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:29:51.10:0,51,760	0/0:8,0:8:21.06:0,21,300	0/0:13,0:10:27.07:0,27,356	0/0:11,0:10:21.89:0,22,283	0/1:11,0:11:99:116,0,117	1/1:14,0:14:9:79,9,0	0/1:14,1:15:46.74:47,0,264	0/0:41,0:40:44.16:0,44,1227	0/0:8,0:8:24.05:0,24,307	0/0:19,0:19:46.65:0,47,557	0/0:22,0:22:48.13:0,48,643	1/1:11,0:11:3:26,3,0	0/0:18,0:18:39.08:0,39,463	1/1:10,0:10:6:53,6,0	0/0:11,0:11:27.06:0,27,340	0/0:12,0:12:30.09:0,30,420	0/0:9,0:9:27.09:0,27,410	0/0:14,0:14:35.96:0,36,465	0/0:25,0:24:69.10:0,69,861	0/0:23,0:23:59.78:0,60,744	0/1:8,0:8:32.54:33,0,295	0/1:8,0:8:3.38:3,0,163	0/0:10,0:10:24.07:0,24,347	0/0:14,2:16:2.94:0,3,318	0/0:10,0:10:24.06:0,24,311	0/1:10,0:10:65.10:77,0,65	0/0:22,0:22:57.14:0,57,723	0/0:8,0:8:3:0,3,236
chr10	88856945	.	AC	A	2932.67	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.440;DP=507;FS=20.426;HRun=1;HaplotypeScore=126.9327;InbreedingCoeff=0.8992;MQ=80.36;MQ0=0;MQRankSum=-7.237;QD=27.67;ReadPosRankSum=-0.697;VQSLOD=1.9772;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.18:0,63,821	0/0:4,0:4:12.04:0,12,191	0/0:9,0:9:27.07:0,27,397	0/0:21,0:21:58.97:0,59,905	0/0:27,0:27:75.26:0,75,1181	0/0:27,0:27:78.23:0,78,1106	0/0:20,0:20:54.16:0,54,786	1/1:3,14:17:51.16:680,51,0	0/0:14,0:14:42.12:0,42,606	0/0:17,0:17:51.14:0,51,757	0/0:23,0:22:66.22:0,66,1043	0/0:25,0:25:72.20:0,72,970	1/1:22,0:22:0.89:2,1,0	0/0:12,0:12:30.07:0,30,391	0/0:9,0:9:24.08:0,24,362	0/0:20,0:20:54.12:0,54,756	0/0:17,0:17:48.14:0,48,680	0/0:9,0:9:27.08:0,27,335	0/0:21,0:21:63.20:0,63,882	0/0:31,0:31:93.32:0,93,1447	1/1:0,5:5:15.05:208,15,0	0/0:21,0:21:54.95:0,55,920	0/0:17,0:17:48.16:0,48,755	0/0:8,0:8:21.05:0,21,284	1/1:0,18:18:53.97:724,54,0	1/1:5,30:32:1.17:1106,1,0	0/0:26,0:25:75.25:0,75,1136	1/1:0,9:9:27.09:377,27,0
chr10	88857116	.	CT	C	4553.68	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.359;DP=608;FS=9.130;HRun=2;HaplotypeScore=62.5952;InbreedingCoeff=0.9887;MQ=71.04;MQ0=0;MQRankSum=-0.674;QD=35.30;ReadPosRankSum=3.027;VQSLOD=5.0241;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:54.18:701,54,0	1/1:0,5:5:15.05:194,15,0	0/0:11,0:11:17.92:0,18,329	0/0:10,0:10:12.84:0,13,195	0/0:26,0:26:71.88:0,72,968	0/0:28,0:28:84.24:0,84,1196	0/0:21,0:21:63.21:0,63,942	0/0:36,0:36:99:0,102,1452	1/1:0,25:25:63.20:818,63,0	1/1:0,33:32:90.29:1168,90,0	1/1:0,24:24:66.21:855,66,0	0/0:25,0:25:69.22:0,69,1013	0/0:25,0:25:75.24:0,75,1104	0/0:19,0:19:57.18:0,57,834	0/0:18,0:18:48.16:0,48,719	0/0:23,0:23:69.23:0,69,1032	1/1:0,21:21:63.20:817,63,0	0/0:9,0:9:27.03:0,27,357	0/0:20,0:20:60.20:0,60,899	0/0:33,0:33:99:0,99,1482	0/0:26,0:26:78.26:0,78,1169	0/0:25,0:25:75.25:0,75,1108	0/0:26,0:26:78.22:0,78,1142	0/0:10,0:10:30.10:0,30,448	0/0:26,0:26:75.17:0,75,1073	0/0:19,1:20:21.23:0,21,795	0/0:32,0:32:96.29:0,96,1385	0/0:10,0:10:30.10:0,30,449
chr10	88857940	.	TACA	T	6329.69	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.757;DP=667;FS=19.606;HRun=0;HaplotypeScore=95.9865;InbreedingCoeff=0.9639;MQ=76.99;MQ0=0;MQRankSum=-5.950;QD=40.32;ReadPosRankSum=2.463;VQSLOD=4.2970;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,2297	0/0:9,0:9:24.08:0,24,536	0/0:21,0:21:21.59:0,22,1062	0/0:17,0:17:42.06:0,42,852	1/1:1,25:26:69.19:1067,69,0	1/1:0,20:20:45.15:735,45,0	1/1:1,15:16:42.14:686,42,0	0/0:33,0:33:93.30:0,93,1987	0/0:31,0:31:87.30:0,87,1942	0/0:28,0:28:81.28:0,81,1794	0/0:27,0:27:75.25:0,75,1602	1/1:0,26:26:72.25:1176,72,0	0/0:26,0:26:78.27:0,78,1743	1/1:0,25:25:60.16:951,60,0	0/0:20,0:20:54.19:0,54,1206	0/0:28,0:28:84.29:0,84,1876	0/0:20,0:20:57.20:0,57,1274	1/1:1,17:18:36.12:588,36,0	0/0:21,0:21:63.19:0,63,1364	0/0:24,0:24:72.22:0,72,1545	0/0:23,0:23:57.20:0,57,1273	1/1:2,24:26:69.24:1127,69,0	0/0:26,0:26:69.24:0,69,1541	0/0:16,1:17:2.22:0,2,1023	0/0:15,0:15:36.12:0,36,804	0/0:29,0:29:81.28:0,81,1792	0/0:38,0:36:99:0,111,2479	0/0:21,0:21:63.22:0,63,1401
chr10	88858249	.	AACAG	A	758.41	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.608;DP=567;FS=2.226;HRun=0;HaplotypeScore=92.6373;InbreedingCoeff=0.9898;MQ=92.57;MQ0=0;MQRankSum=-1.035;QD=47.40;ReadPosRankSum=2.806;VQSLOD=4.4806;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.25:0,72,1914	0/0:6,0:6:18.06:0,18,472	0/0:20,0:20:54.19:0,54,1432	0/0:30,0:30:82.87:0,83,2065	0/0:23,0:23:60.19:0,60,1517	0/0:22,0:22:66.23:0,66,1746	0/0:16,0:16:42.14:0,42,1124	0/0:31,0:31:87.29:0,87,2259	0/0:20,0:20:60.21:0,60,1587	0/0:18,0:18:51.18:0,51,1378	0/0:20,0:20:60.21:0,60,1620	0/0:10,0:10:27.09:0,27,728	0/0:20,0:20:57.20:0,57,1533	0/0:20,0:20:60.21:0,60,1613	0/0:21,0:21:60.21:0,60,1590	0/0:23,0:23:69.24:0,69,1847	0/0:26,0:25:78.25:0,78,2019	0/0:15,0:15:39.13:0,39,1052	0/0:19,0:19:57.20:0,57,1522	0/0:12,0:12:36.12:0,36,935	0/0:48,0:48:99:0,135,3600	0/0:9,0:9:27.09:0,27,728	0/0:13,0:13:39.13:0,39,1052	0/0:27,0:27:75.24:0,75,1952	1/1:0,16:16:45.15:853,45,0	0/0:25,0:25:66.23:0,66,1774	0/0:18,0:18:54.15:0,54,1328	0/0:15,0:15:42.14:0,42,1097
chr10	88858310	.	ATG	A	810.26	PASS	AB=0.887;AC=22;AF=0.423;AN=52;BaseQRankSum=1.937;DP=468;FS=0.777;HRun=0;HaplotypeScore=74.3416;InbreedingCoeff=0.3298;MQ=68.98;MQ0=9;MQRankSum=1.170;QD=3.99;ReadPosRankSum=1.643;VQSLOD=2.1140;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:9:0,9,93	1/1:6,0:10:8.52:42,9,0	./.	./.	0/0:17,0:16:11.81:0,12,123	0/0:20,0:21:28.50:0,28,235	0/0:12,0:18:8.88:0,9,83	0/0:28,0:28:4.26:0,4,40	0/0:11,0:15:5.94:0,6,50	1/1:11,0:16:5.64:28,6,0	1/1:10,0:14:2.84:14,3,0	0/0:4,0:9:2.97:0,3,26	1/1:5,2:7:11.77:109,12,0	0/0:11,0:16:2.91:0,3,26	1/1:6,4:9:3.01:32,3,0	0/1:13,2:16:63.75:64,0,74	0/1:23,0:26:17.12:62,0,17	0/0:12,0:16:11.81:0,12,128	0/1:8,2:10:26.32:26,0,27	1/1:7,5:12:12.03:129,12,0	0/0:33,0:33:23.76:0,24,354	0/1:5,0:12:4.21:4,0,18	0/1:5,1:6:26.31:26,0,38	1/1:11,11:22:27.53:292,28,0	0/0:13,0:14:6.01:0,6,70	0/0:17,0:17:15.05:0,15,199	1/1:14,4:18:14.87:142,15,0	0/1:19,2:22:12.24:12,0,386
chr10	88859177	.	CA	C	1457.85	PASS	AB=0.778;AC=19;AF=0.339;AN=56;BaseQRankSum=0.555;DP=580;FS=28.071;HRun=15;HaplotypeScore=92.6130;InbreedingCoeff=0.2639;MQ=71.68;MQ0=0;MQRankSum=-0.024;QD=5.17;ReadPosRankSum=5.343;VQSLOD=0.4488;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,2:18:22.44:0,22,291	0/0:8,0:8:20:0,20,114	0/0:27,0:18:2.20:0,2,110	0/0:10,1:10:6.11:0,6,44	1/1:8,14:24:10.68:175,11,0	1/1:4,13:17:18.18:227,18,0	0/1:10,8:19:31.53:63,0,32	1/1:6,13:22:39.35:231,39,0	0/0:13,0:19:20.64:0,21,147	0/0:11,0:27:43.61:0,44,264	0/0:8,0:22:37.14:0,37,201	0/1:18,3:21:31.81:68,0,32	0/1:16,3:19:31.70:32,0,200	0/1:14,8:22:40.23:60,0,40	0/0:24,0:25:59.70:0,60,491	0/0:28,3:31:26.66:0,27,432	0/0:4,0:18:28.53:0,29,148	0/1:7,7:14:5.28:58,0,5	0/1:21,1:24:22.22:22,0,223	0/1:22,2:24:1.93:2,0,245	1/1:8,9:18:28.27:167,28,0	1/1:4,10:14:32.25:204,32,0	0/0:15,3:20:0.13:0,0,222	0/0:19,1:20:20.92:0,21,384	0/0:13,0:15:28.97:0,29,256	0/1:6,15:21:9.24:189,0,9	0/0:25,0:36:46.98:0,47,360	0/1:14,8:22:19.91:141,0,20
chr10	88859906	.	CG	C	5252.25	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=10.697;DP=473;FS=12.367;HRun=6;HaplotypeScore=66.8743;InbreedingCoeff=0.9870;MQ=68.89;MQ0=0;MQRankSum=-2.460;QD=27.64;ReadPosRankSum=1.030;VQSLOD=4.5892;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:57.14:612,57,0	1/1:0,11:11:33.08:355,33,0	0/0:6,0:6:11.31:0,11,96	0/0:7,0:7:15.04:0,15,184	0/0:24,0:24:66.17:0,66,813	0/0:18,0:18:54.18:0,54,711	0/0:17,0:17:51.15:0,51,655	1/1:6,11:18:29.83:322,30,0	1/1:2,13:15:36.09:387,36,0	1/1:1,24:25:72.18:773,72,0	1/1:0,25:25:69.17:741,69,0	0/0:12,0:12:33.09:0,33,407	0/0:13,0:13:39.10:0,39,485	0/0:16,0:16:48.14:0,48,617	0/0:13,0:13:36.12:0,36,473	0/0:13,0:13:33.10:0,33,421	1/1:0,19:19:51.13:548,51,0	0/0:21,0:21:54.18:0,54,710	0/0:7,0:7:21.07:0,21,276	0/0:24,0:24:66.21:0,66,867	1/1:1,9:10:24.06:258,24,0	0/0:23,0:23:66.19:0,66,835	0/0:28,0:28:78.24:0,78,1009	0/0:12,0:12:33.11:0,33,434	1/1:2,18:20:51.13:548,51,0	1/1:1,18:19:54.14:580,54,0	0/0:29,0:29:75.22:0,75,951	1/1:0,5:5:12.03:129,12,0
chr10	88860102	.	TGCACGG	T	2029.44	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.375;DP=591;FS=0.682;HRun=0;HaplotypeScore=155.8470;InbreedingCoeff=0.9136;MQ=87.97;MQ0=0;MQRankSum=-8.990;QD=43.18;ReadPosRankSum=0.916;VQSLOD=3.6407;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,3536	1/1:1,3:4:9.03:216,9,0	0/0:27,0:27:72.25:0,72,2472	0/0:16,0:16:31.45:0,31,1335	0/0:12,0:12:36.12:0,36,1252	0/0:9,0:9:27.09:0,27,964	0/0:22,0:22:66.23:0,66,2193	0/0:24,0:24:60.21:0,60,1984	0/0:23,0:23:66.21:0,66,2269	1/1:4,12:16:36.12:864,36,0	1/1:3,11:14:24.08:528,24,0	0/0:27,0:27:78.27:0,78,2786	0/0:30,0:30:90.30:0,90,3145	0/0:26,0:26:78.25:0,78,2695	0/0:22,0:22:66.23:0,66,2319	0/0:29,0:29:84.29:0,84,2996	1/1:3,10:13:24.08:576,24,0	0/0:15,0:15:45.13:0,45,1391	0/0:11,0:11:33.10:0,33,1106	0/0:28,0:28:78.27:0,78,2687	0/0:48,0:48:99:0,141,4883	0/0:7,0:7:21.07:0,21,756	0/0:23,0:23:63.22:0,63,2139	0/0:25,0:25:72.23:0,72,2459	0/0:21,0:21:63.22:0,63,2267	0/0:24,1:25:0.26:0,0,2364	0/0:25,0:25:69.24:0,69,2402	0/0:15,0:15:45.15:0,45,1566
chr10	88861598	.	C	CA	8037.13	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=1.225;DP=505;FS=10.115;HRun=8;HaplotypeScore=63.4247;InbreedingCoeff=0.9894;MQ=88.69;MQ0=0;MQRankSum=-3.394;QD=24.65;ReadPosRankSum=1.291;VQSLOD=5.2802;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:20:31.25:159,31,0	1/1:2,6:8:18.05:208,18,0	0/0:19,0:19:44.96:0,45,399	0/0:22,0:21:34.75:0,35,295	1/1:3,22:24:54.12:608,54,0	1/1:3,17:20:45.13:519,45,0	1/1:2,11:13:30.09:346,30,0	1/1:2,24:26:72.19:810,72,0	1/1:1,0:16:34.09:173,34,0	1/1:6,17:23:51.14:579,51,0	1/1:2,20:22:60.15:680,60,0	1/1:2,18:20:45.13:519,45,0	0/0:22,0:22:54.03:0,54,494	1/1:3,18:21:48.14:554,48,0	0/0:11,0:11:30.01:0,30,275	0/0:19,0:19:54.02:0,54,490	1/1:1,17:18:51.15:588,51,0	1/1:1,13:14:39.12:450,39,0	0/0:15,0:15:33.01:0,33,302	0/0:17,0:17:45.02:0,45,412	1/1:0,13:13:30.09:346,30,0	1/1:1,19:17:48.11:540,48,0	0/0:20,0:20:48.02:0,48,439	0/0:8,0:8:24.01:0,24,220	1/1:0,0:17:34.09:173,34,0	1/1:2,20:22:60.16:680,60,0	0/0:26,0:26:75.02:0,75,681	1/1:2,5:5:9.03:104,9,0
chr10	88862538	.	TCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGC	T	1687.93	PASS	AB=0.684;AC=15;AF=0.278;AN=54;BaseQRankSum=1.744;DP=337;FS=5.193;HRun=0;HaplotypeScore=231.0672;InbreedingCoeff=0.5331;MQ=63.44;MQ0=5;MQRankSum=-3.639;QD=16.08;ReadPosRankSum=-0.722;VQSLOD=2.0624;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,15:22:3.01:241,3,0	1/1:2,4:6:3.01:244,3,0	0/0:13,0:9:3:0,3,27	0/0:15,0:10:6.59:0,7,32	./.	0/0:6,0:11:12.04:0,12,617	0/0:19,0:18:33.07:0,33,1811	0/0:10,0:10:3.01:0,3,64	1/1:6,15:21:3.01:244,3,0	1/1:6,13:19:24.05:502,24,0	1/1:6,2:8:3.01:244,3,0	0/0:7,0:15:21.06:0,21,1064	0/0:11,0:11:21.07:0,21,1812	0/0:15,0:20:24.07:0,24,1031	0/0:4,0:9:12.04:0,12,1292	0/0:8,0:8:15.04:0,15,1115	1/1:7,0:7:16.60:269,17,0	0/0:8,0:10:18.06:0,18,803	0/0:7,0:7:3:0,3,26	0/0:6,0:6:3.01:0,3,200	0/0:19,0:19:21.63:0,22,358	0/0:5,0:6:6.02:0,6,292	0/0:5,0:5:6.02:0,6,500	0/0:11,0:27:42.14:0,42,4070	1/1:9,0:7:1.55:4,2,0	0/1:7,0:13:93.49:93,0,245	0/0:7,0:12:21.04:0,21,1281	0/0:5,0:5:3:0,3,28
chr10	88863512	.	TTTCCTC	T	3802.78	PASS	AB=0.778;AC=34;AF=0.607;AN=56;BaseQRankSum=11.006;DP=397;FS=31.571;HRun=0;HaplotypeScore=124.3935;InbreedingCoeff=0.7941;MQ=59.73;MQ0=7;MQRankSum=-3.880;QD=15.52;ReadPosRankSum=1.816;VQSLOD=1.5928;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:38.44:354,38,0	1/1:6,0:6:10.21:76,10,0	0/0:19,0:12:29.09:0,29,312	0/0:13,0:7:17.79:0,18,144	1/1:11,0:11:29.29:196,29,0	1/1:12,0:12:23.83:179,24,0	1/1:11,0:11:13.55:151,14,0	1/1:21,0:19:50.77:413,51,0	1/1:23,0:22:40.14:386,40,0	1/1:2,9:11:1.20:99,1,0	0/1:2,8:10:7.49:46,0,7	0/1:14,0:14:7.17:131,0,7	0/0:20,0:19:48.73:0,49,358	1/1:10,0:9:26.65:192,27,0	0/0:18,0:17:50.84:0,51,405	0/0:17,0:17:43.79:0,44,346	1/1:17,0:16:41.63:308,42,0	1/1:6,0:6:3:27,3,0	0/0:13,0:12:31.81:0,32,271	0/0:10,0:10:28.19:0,28,205	1/1:28,0:27:65.78:538,66,0	1/1:14,0:14:7.73:200,8,0	0/0:16,0:16:38.43:0,38,285	0/0:11,0:11:29.92:0,30,241	1/1:13,0:13:22.90:175,23,0	1/1:14,0:13:23.32:187,23,0	0/0:15,0:15:30.62:0,31,295	1/1:6,0:6:17.96:147,18,0
chr10	88863558	.	CT	C	254.67	PASS	AB=0.903;AC=14;AF=0.280;AN=50;BaseQRankSum=4.735;DP=240;FS=2.082;HRun=1;HaplotypeScore=51.0973;InbreedingCoeff=-0.1384;MQ=45.93;MQ0=73;MQRankSum=-4.012;QD=2.45;ReadPosRankSum=3.521;VQSLOD=-0.5584;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,1:10:39.63:40,0,172	0/1:1,1:2:24.78:27,0,25	0/1:21,0:2:3.76:4,0,33	0/0:36,0:5:4.25:0,4,32	0/0:5,1:5:3.48:0,3,36	0/1:12,2:11:42.20:42,0,231	0/0:10,0:7:5.63:0,6,72	0/0:16,0:5:15.05:0,15,231	0/1:9,0:8:24.10:24,0,145	0/1:6,0:4:17.22:17,0,27	1/1:5,2:6:8.39:74,8,0	0/0:7,0:6:14.35:0,14,172	0/1:3,1:2:12.66:13,0,39	./.	0/1:2,0:2:18.66:21,0,19	0/0:4,0:2:5.69:0,6,55	0/0:10,0:6:12.04:0,12,172	0/0:4,0:4:3.01:0,3,47	./.	0/0:3,0:2:1.55:0,2,4	0/0:13,0:5:1.25:0,1,3	0/1:8,2:10:75.89:76,0,151	0/0:5,0:2:3.01:0,3,48	./.	0/1:10,1:8:9.32:9,0,279	0/0:3,0:2:6.01:0,6,74	1/1:2,1:3:6.75:45,7,0	0/0:4,0:1:3.01:0,3,48
chr10	88864519	.	GA	G	8617.05	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=8.937;DP=588;FS=0.000;HRun=9;HaplotypeScore=59.6593;InbreedingCoeff=0.9976;MQ=75.72;MQ0=0;MQRankSum=-2.528;QD=22.32;ReadPosRankSum=3.792;VQSLOD=5.5536;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:39.01:357,39,0	1/1:1,7:8:18.01:165,18,0	0/0:16,0:16:27.50:0,28,281	0/0:13,0:13:33.06:0,33,344	1/1:1,21:22:45.01:412,45,0	1/1:6,16:22:45.01:412,45,0	1/1:3,12:15:27.01:247,27,0	1/1:6,22:28:66.03:604,66,0	1/1:3,26:29:75.04:686,75,0	1/1:3,29:32:84.02:765,84,0	1/1:2,22:24:60.02:549,60,0	1/1:3,14:17:42.02:384,42,0	0/0:20,0:20:60.18:0,60,692	1/1:1,18:19:48.03:439,48,0	0/0:19,0:19:48.13:0,48,545	0/0:13,0:13:36.11:0,36,415	1/1:1,33:34:81.04:741,81,0	1/1:2,19:21:57.03:522,57,0	0/0:27,0:27:66.18:0,66,746	0/0:23,0:23:66.18:0,66,745	1/1:1,10:11:27.01:247,27,0	1/1:2,20:22:57.03:522,57,0	0/0:25,1:25:63.11:0,63,691	0/0:17,1:18:20.62:0,21,468	1/1:1,19:20:51.03:467,51,0	1/1:1,24:25:72.04:659,72,0	0/0:27,0:27:78.22:0,78,891	1/1:0,17:17:48.03:439,48,0
chr10	88865763	.	GTAA	G	274.71	PASS	AB=1.000;AC=10;AF=0.185;AN=54;BaseQRankSum=4.823;DP=203;FS=11.369;HRun=0;HaplotypeScore=42.0079;InbreedingCoeff=0.5025;MQ=59.40;MQ0=2;MQRankSum=0.910;QD=4.36;ReadPosRankSum=-0.952;VQSLOD=0.1377;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:12:14.92:0,15,165	1/1:1,0:1:2.99:24,3,0	0/0:14,0:12:27.93:0,28,401	0/0:9,0:6:18.05:0,18,332	0/0:4,0:4:12.04:0,12,184	0/0:5,0:5:14.98:0,15,227	0/1:3,0:3:10.60:11,0,19	0/1:39,0:38:79.58:80,0,867	0/0:4,0:4:5.91:0,6,116	1/1:2,3:5:9.01:105,9,0	1/1:0,7:7:14.96:162,15,0	0/0:8,0:8:21.07:0,21,384	0/0:3,0:3:9.03:0,9,157	0/0:5,0:5:12.04:0,12,214	0/0:2,0:2:6.01:0,6,74	0/0:5,0:5:15.03:0,15,199	1/1:0,8:8:3.01:35,3,0	0/0:16,0:16:36.09:0,36,629	0/0:5,0:5:11.52:0,12,149	0/0:3,0:3:8.93:0,9,90	./.	0/0:4,0:4:9.02:0,9,123	0/0:2,0:2:5.99:0,6,49	0/0:2,0:2:6.02:0,6,85	0/0:6,0:6:15.05:0,15,259	0/0:8,0:8:21.06:0,21,347	0/0:7,0:7:21.06:0,21,340	0/0:15,0:15:13.09:0,13,137
chr10	88865769	.	GTAATAATAA	G	1036.60	PASS	AC=6;AF=0.150;AN=40;BaseQRankSum=-2.605;DP=166;FS=1.107;HRun=0;HaplotypeScore=50.1756;InbreedingCoeff=0.3897;MQ=59.20;MQ0=2;MQRankSum=3.454;QD=19.93;ReadPosRankSum=-3.420;VQSLOD=0.3924;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:9.03:0,9,353	0/0:1,0:1:2.98:0,3,22	./.	./.	0/0:3,0:5:6.02:0,6,148	0/0:4,0:5:6.02:0,6,255	./.	1/1:20,19:38:57.10:954,57,0	0/0:3,0:3:6.02:0,6,274	1/1:3,0:4:4.25:25,4,0	0/0:6,0:7:0.12:0,0,12	0/0:5,0:8:6.02:0,6,236	0/0:2,0:3:3.01:0,3,118	0/0:4,0:4:3.01:0,3,138	0/0:2,0:2:3.01:0,3,97	./.	0/0:8,0:8:0:0,0,0	0/0:9,0:16:18.06:0,18,630	0/0:4,0:4:9.03:0,9,314	0/0:2,0:2:6.02:0,6,134	./.	./.	0/0:1,0:1:3.01:0,3,72	./.	0/0:2,0:4:3.01:0,3,92	./.	0/0:3,0:5:6.02:0,6,235	1/1:2,7:9:6.02:167,6,0
chr10	88866260	.	GCTGTATAAACCAATGACTCTTGGGCCTTAGAGGACAACAT	G	8472.20	PASS	AB=0.650;AC=17;AF=0.327;AN=52;BaseQRankSum=7.895;DP=453;FS=5.965;HRun=0;HaplotypeScore=441.0725;InbreedingCoeff=0.7714;MQ=90.98;MQ0=0;MQRankSum=-7.801;QD=98.51;ReadPosRankSum=5.501;VQSLOD=2.3300;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,16378	0/0:6,0:6:18.06:0,18,1971	0/0:15,0:15:39.13:0,39,2498	0/0:26,0:26:75.26:0,75,5635	1/1:9,3:12:3.01:310,3,0	1/1:4,4:8:12.04:1239,12,0	./.	1/1:13,0:13:6.02:111,6,0	0/0:29,0:29:81.28:0,81,12869	0/0:27,0:27:81.28:0,81,10964	0/0:9,0:9:27.09:0,27,3515	1/1:5,6:11:15.05:1548,15,0	0/0:19,0:19:57.20:0,57,7522	1/1:6,5:11:12.04:1239,12,0	0/0:20,0:20:57.20:0,57,7443	0/0:20,0:20:60.21:0,60,8105	0/0:21,0:21:63.20:0,63,8299	./.	0/0:18,0:18:48.16:0,48,4945	0/0:22,0:22:63.22:0,63,7640	0/0:11,0:11:1.41:0,1,3	1/1:6,2:8:3.01:310,3,0	0/0:17,0:17:48.16:0,48,7393	0/0:28,0:28:81.28:0,81,10568	1/1:3,3:6:9.03:929,9,0	0/1:6,7:13:99:1857,0,487	0/0:24,0:23:69.24:0,69,9108	1/1:1,3:4:9.03:929,9,0
chr10	88867193	.	TACACACACACC	T	1561.55	PASS	AB=1.000;AC=10;AF=0.185;AN=54;BaseQRankSum=2.249;DP=571;FS=13.522;HRun=0;HaplotypeScore=166.7747;InbreedingCoeff=0.3486;MQ=61.68;MQ0=68;MQRankSum=-2.027;QD=12.80;ReadPosRankSum=2.347;VQSLOD=2.1283;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,19:31:24.08:532,24,0	0/0:4,0:3:5.53:0,6,90	0/0:70,0:18:30.10:0,30,506	0/0:62,0:14:23.33:0,23,306	0/1:10,0:9:0:1,0,0	0/0:27,0:19:13.32:0,13,132	0/0:21,0:19:1.72:0,2,33	0/1:17,0:14:99:144,0,380	1/1:2,14:15:27.09:867,27,0	0/1:14,0:12:87.33:87,0,319	./.	0/0:15,0:12:9.50:0,9,103	0/0:17,0:16:39.13:0,39,1385	0/0:16,0:15:9.43:0,9,134	0/0:28,0:28:69.23:0,69,2701	0/0:19,0:19:46.71:0,47,2010	0/0:19,0:14:14.41:0,14,288	0/1:8,0:5:50.04:64,0,50	0/0:11,0:10:24.08:0,24,707	0/0:16,0:16:36.08:0,36,1239	0/0:31,0:24:42.62:0,43,1582	0/1:10,0:10:0:0,0,0	0/0:14,0:13:14.87:0,15,712	0/0:23,0:23:53.98:0,54,2127	0/0:16,0:13:3:0,3,73	0/1:10,0:8:4.68:5,0,592	0/0:22,0:22:57.19:0,57,2161	0/0:11,0:10:15.05:0,15,601
chr10	88867196	.	ACACACAC	A	1331.79	PASS	AB=0.987;AC=21;AF=0.375;AN=56;BaseQRankSum=6.455;DP=582;FS=7.011;HRun=0;HaplotypeScore=144.2513;InbreedingCoeff=0.5465;MQ=58.10;MQ0=70;MQRankSum=-4.700;QD=5.92;ReadPosRankSum=0.214;VQSLOD=2.1985;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:28:24.07:314,24,0	0/0:4,0:3:5.42:0,5,36	0/0:68,0:16:30.10:0,30,454	0/0:60,0:12:23.32:0,23,244	1/1:10,0:9:0.47:1,0,0	1/1:27,1:20:5.15:55,5,0	1/1:21,2:21:3.80:20,4,0	0/1:17,0:14:92.32:152,0,92	1/1:16,0:15:27.09:438,27,0	0/1:16,0:14:54.07:175,0,54	0/1:9,0:9:0:0,0,0	1/1:16,0:13:8.85:72,9,0	0/0:18,0:17:39.60:0,40,985	1/1:16,1:16:14.73:144,15,0	0/0:28,0:28:69.23:0,69,1872	0/0:19,0:19:46.71:0,47,1362	0/1:17,0:12:19.58:20,0,47	1/1:8,0:5:11.52:116,12,0	0/0:11,0:10:27.09:0,27,643	0/0:19,0:19:36.55:0,37,872	0/0:33,0:25:9.92:0,10,805	0/1:13,1:14:0:0,0,0	0/0:14,0:13:18.25:0,18,530	0/0:23,0:23:54.10:0,54,1476	0/0:13,0:10:2.97:0,3,21	0/0:14,0:11:0.93:0,1,275	0/0:23,0:23:57.19:0,57,1437	0/0:10,0:9:15.02:0,15,322
chr10	88867198	.	ACACAC	A	1970.37	PASS	AB=0.787;AC=26;AF=0.464;AN=56;BaseQRankSum=5.650;DP=592;FS=6.239;HRun=0;HaplotypeScore=130.7775;InbreedingCoeff=0.7071;MQ=57.02;MQ0=73;MQRankSum=-4.654;QD=7.91;ReadPosRankSum=-0.191;VQSLOD=2.0886;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:27:24.06:269,24,0	1/1:4,0:3:2.03:6,2,0	0/0:68,0:16:30.10:0,30,441	0/0:61,0:11:23.22:0,23,206	0/1:4,7:10:0:1,0,0	1/1:9,21:22:14.33:248,14,0	1/1:5,18:21:3.31:64,3,0	0/1:17,0:14:46.67:229,0,47	1/1:16,0:15:27.07:314,27,0	1/1:16,1:14:18.19:296,18,0	0/1:11,0:10:0:0,0,0	1/1:4,13:14:9.03:162,9,0	0/0:18,0:17:39.60:0,40,779	1/1:4,13:16:14.85:290,15,0	0/0:27,0:27:69.23:0,69,1472	0/0:20,0:20:46.71:0,47,1046	1/1:12,5:12:12.80:149,13,0	1/1:9,0:5:11.99:126,12,0	0/0:11,0:10:27.09:0,27,539	0/0:19,0:19:23.92:0,24,682	0/0:34,0:25:5.70:0,6,482	0/1:2,12:14:0:0,0,0	0/0:14,0:13:18.25:0,18,383	0/0:23,0:23:54.03:0,54,1166	1/1:13,0:10:1.82:5,2,0	0/0:14,0:11:0.78:0,1,174	0/0:24,0:24:57.11:0,57,1094	0/0:10,0:9:14.98:0,15,214
chr10	88867200	.	ACAC	A	2138.75	PASS	AB=0.907;AC=28;AF=0.500;AN=56;BaseQRankSum=4.939;DP=600;FS=7.002;HRun=0;HaplotypeScore=119.6286;InbreedingCoeff=0.6531;MQ=54.06;MQ0=75;MQRankSum=-4.685;QD=7.15;ReadPosRankSum=-2.121;VQSLOD=1.4292;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:25:24.08:303,24,0	1/1:1,3:3:6.02:87,6,0	0/0:69,0:13:30.10:0,30,417	0/0:65,0:11:23.21:0,23,202	0/1:10,1:10:0:1,0,0	1/1:30,0:22:15.03:178,15,0	1/1:22,0:20:3.14:30,3,0	0/1:17,0:14:13.13:252,0,13	1/1:16,0:15:27.03:279,27,0	1/1:7,11:15:31.91:412,32,0	0/1:1,10:10:0:0,0,0	1/1:17,0:14:9.50:103,9,0	0/0:19,0:18:39.13:0,39,584	1/1:17,0:16:15.02:148,15,0	0/0:27,0:27:69.23:0,69,1079	0/0:20,0:20:46.40:0,46,728	1/1:10,7:12:15.51:209,16,0	1/1:10,0:6:12.01:131,12,0	0/0:11,0:10:22.14:0,22,413	0/0:19,0:19:23.92:0,24,510	0/1:34,0:25:3.33:3,0,172	0/1:14,0:14:0.04:0,0,0	0/0:14,0:13:18.23:0,18,258	0/0:23,0:23:54:0,54,849	1/1:3,10:11:3.01:50,3,0	0/1:17,0:14:28.86:145,0,29	0/0:23,0:24:56.08:0,56,770	0/0:10,0:9:14.55:0,15,102
chr10	88867202	.	AC	A	2274.08	PASS	AB=0.972;AC=33;AF=0.589;AN=56;BaseQRankSum=7.191;DP=599;FS=10.603;HRun=2;HaplotypeScore=108.7167;InbreedingCoeff=0.8273;MQ=51.06;MQ0=76;MQRankSum=-4.028;QD=7.46;ReadPosRankSum=-2.305;VQSLOD=-0.5567;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,2:24:24.08:303,24,0	1/1:4,0:3:5.95:56,6,0	0/0:69,1:12:31.34:0,31,398	0/0:65,0:9:20.61:0,21,191	0/1:10,1:10:0:1,0,0	1/1:29,1:22:14.63:109,15,0	1/1:21,1:20:2.90:16,3,0	1/1:17,0:14:34.65:339,35,0	1/1:15,0:14:25.75:210,26,0	1/1:16,1:14:32.81:347,33,0	0/1:11,0:10:0:0,0,0	1/1:16,1:14:9.23:69,9,0	0/0:18,0:18:38.97:0,39,434	1/1:15,0:14:14.01:74,14,0	0/0:26,0:27:68.86:0,69,701	0/0:22,0:22:45.70:0,46,437	1/1:13,4:12:14.55:83,15,0	1/1:1,9:6:11.90:129,12,0	0/0:11,0:10:21.91:0,22,318	0/0:17,0:18:24.54:0,25,344	1/1:28,8:27:38.95:281,39,0	0/1:14,0:14:0:0,0,0	0/0:13,0:13:17.36:0,17,157	0/0:25,0:25:53.91:0,54,556	1/1:12,0:9:2.92:17,3,0	1/1:17,2:16:40.11:419,40,0	0/0:23,0:23:49.06:0,49,519	1/1:7,1:7:7.36:21,7,0
chr10	88867203	.	C	CCA	2676.07	PASS	AB=0.794;AC=26;AF=0.520;AN=50;BaseQRankSum=-6.313;DP=626;FS=16.253;HRun=0;HaplotypeScore=122.5386;InbreedingCoeff=0.1927;MQ=50.71;MQ0=76;MQRankSum=4.514;QD=7.56;ReadPosRankSum=0.163;VQSLOD=2.4830;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:0:0,0,1	0/0:4,0:4:2.78:0,3,12	./.	./.	0/1:10,0:10:0:0,0,0	0/0:26,0:24:11.19:0,11,49	0/0:24,0:23:2.53:0,3,12	1/1:2,0:14:12.95:57,13,0	0/0:14,0:14:13.18:0,13,62	0/1:16,0:16:11.95:12,0,28	./.	0/1:14,0:14:9.70:10,0,17	1/1:11,9:19:15.05:227,15,0	0/0:16,0:16:13.93:0,14,63	0/1:11,14:26:51.68:523,0,52	1/1:7,15:22:1.70:424,2,0	0/0:16,0:12:13.83:0,14,62	1/1:10,0:7:2.04:6,2,0	0/1:9,3:11:21.01:110,0,21	0/1:9,9:20:9.34:284,0,9	1/1:15,0:28:27.72:153,28,0	0/1:16,0:16:0:0,0,0	0/1:8,6:13:36.21:118,0,36	1/1:10,15:26:29.95:454,30,0	0/0:12,0:10:2.74:0,3,12	1/1:3,0:17:4.44:103,4,0	0/1:11,8:23:99:250,0,104	1/1:4,0:11:14.09:96,14,0
chr10	88867654	.	CT	C	3738.80	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.505;DP=605;FS=3.103;HRun=1;HaplotypeScore=76.3238;InbreedingCoeff=0.9936;MQ=56.47;MQ0=10;MQRankSum=0.823;QD=34.62;ReadPosRankSum=0.394;VQSLOD=3.5440;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,2112	0/0:5,0:5:15.05:0,15,240	0/0:22,0:9:24.08:0,24,376	0/0:30,0:15:42.07:0,42,617	0/0:11,0:11:30.10:0,30,479	0/0:19,0:19:57.19:0,57,906	0/0:24,0:24:69.22:0,69,1069	1/1:0,16:10:30.10:416,30,0	0/0:20,0:20:54.18:0,54,850	0/0:19,0:19:54.18:0,54,831	0/0:17,0:17:45.14:0,45,682	0/0:25,0:25:75.17:0,75,1165	0/0:24,0:24:72.25:0,72,1146	0/0:27,0:27:81.28:0,81,1295	0/0:23,0:23:69.22:0,69,1078	0/0:20,0:20:60.20:0,60,959	0/0:28,0:28:84.29:0,84,1331	0/0:21,0:21:63.21:0,63,1001	0/0:16,0:11:33.11:0,33,511	0/0:24,0:24:72.23:0,72,1120	1/1:1,47:48:99:1636,117,0	0/0:20,0:20:51.17:0,51,815	0/0:13,0:13:39.13:0,39,620	0/0:20,0:20:60.20:0,60,959	1/1:0,20:20:51.17:699,51,0	1/1:0,18:18:54.16:736,54,0	0/0:20,0:20:60.19:0,60,931	1/1:0,6:6:18.06:252,18,0
chr10	88869411	.	G	GT	2189.28	PASS	AB=0.710;AC=5;AF=0.089;AN=56;BaseQRankSum=-7.341;DP=696;FS=3.257;HRun=7;HaplotypeScore=71.9397;InbreedingCoeff=-0.1073;MQ=59.69;MQ0=1;MQRankSum=-7.816;QD=9.82;ReadPosRankSum=-2.462;VQSLOD=1.2518;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:61.65:0,62,583	0/0:9,0:9:24.04:0,24,232	0/0:19,0:19:21.20:0,21,353	0/0:9,0:8:2.04:0,2,103	0/0:32,0:32:90.13:0,90,863	0/0:17,0:17:48.07:0,48,460	0/0:14,0:14:35.70:0,36,347	0/1:34,30:63:99:876,0,501	0/0:20,0:20:60.10:0,60,579	0/0:32,0:32:83.85:0,84,785	0/0:31,0:30:78.10:0,78,747	0/0:10,0:9:21.03:0,21,203	0/0:15,0:14:36.04:0,36,342	0/0:9,0:9:24.03:0,24,229	0/0:21,0:20:48.06:0,48,458	0/0:19,0:17:48.07:0,48,458	0/0:32,0:32:87.10:0,87,827	0/0:18,0:17:42.06:0,42,405	0/0:19,0:18:48.07:0,48,459	0/0:34,0:34:84.08:0,84,801	0/1:10,16:26:99:342,0,149	0/0:14,0:12:27.04:0,27,260	0/0:26,0:26:66.07:0,66,626	0/0:8,0:8:18.03:0,18,174	0/1:24,18:40:99:370,0,473	0/1:32,22:45:99:538,0,465	0/0:39,0:37:89.80:0,90,858	0/1:30,7:36:99:181,0,547
chr10	88869945	.	CT	C	8016.57	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=13.039;DP=667;FS=3.910;HRun=6;HaplotypeScore=67.1877;InbreedingCoeff=0.9900;MQ=62.07;MQ0=2;MQRankSum=5.456;QD=27.93;ReadPosRankSum=3.090;VQSLOD=5.6790;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:44.44:0,44,599	0/0:11,0:11:33.11:0,33,434	0/0:28,0:21:62.72:0,63,707	0/0:20,0:17:45.09:0,45,541	1/1:0,34:34:99:1064,99,0	1/1:1,32:33:93.23:999,93,0	1/1:2,19:21:51.13:548,51,0	1/1:3,26:28:72.08:727,72,0	0/0:13,0:13:39.13:0,39,513	0/0:32,0:32:96.30:0,96,1240	0/0:29,0:29:78.25:0,78,1026	1/1:2,18:20:56.93:593,57,0	0/0:28,0:28:84.25:0,84,1077	1/1:1,22:23:60.15:645,60,0	0/0:26,0:26:78.25:0,78,1026	0/0:20,0:20:57.16:0,57,721	0/0:23,0:23:59.12:0,59,808	1/1:2,17:19:52.68:552,53,0	0/0:24,0:24:66.21:0,66,855	0/0:37,0:37:99:0,105,1322	1/1:0,13:13:33.08:355,33,0	1/1:2,21:23:57.14:612,57,0	0/0:21,0:21:60.17:0,60,762	0/0:13,0:13:36:0,36,419	1/1:0,19:19:54.14:580,54,0	1/1:4,33:37:62.76:1016,63,0	0/0:35,0:33:96.27:0,96,1228	1/1:5,11:16:8.03:326,8,0
chr10	88870872	.	AT	A	2765.86	PASS	AB=0.833;AC=13;AF=0.241;AN=54;BaseQRankSum=12.353;DP=501;FS=0.000;HRun=7;HaplotypeScore=49.3064;InbreedingCoeff=0.8985;MQ=57.21;MQ0=8;MQRankSum=0.668;QD=24.70;ReadPosRankSum=1.399;VQSLOD=3.8210;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:39.09:398,39,0	1/1:2,10:12:24.05:245,24,0	0/1:4,1:2:23.06:25,0,23	./.	0/0:26,0:26:69.20:0,69,853	0/0:39,0:39:99:0,111,1372	0/0:15,0:15:45.13:0,45,554	0/0:21,0:21:63.19:0,63,776	1/1:1,21:22:60.14:611,60,0	1/1:0,14:14:42.10:428,42,0	1/1:0,22:22:63.14:643,63,0	0/0:14,0:13:39.12:0,39,490	0/0:18,0:18:54.17:0,54,668	0/0:17,0:17:45.14:0,45,566	0/0:16,0:16:48.15:0,48,604	0/0:10,0:10:27.07:0,27,327	1/1:0,20:21:62.09:605,62,0	0/0:19,1:20:29.61:0,30,671	0/0:14,0:11:33.11:0,33,415	0/0:27,0:27:78.25:0,78,977	0/0:9,0:9:27.07:0,27,320	0/0:21,0:21:63.19:0,63,781	0/0:21,0:20:60.19:0,60,753	0/0:10,0:10:30.10:0,30,377	0/0:19,0:19:57.18:0,57,717	0/0:30,0:30:78.24:0,78,970	0/0:22,0:22:66.21:0,66,829	0/0:16,0:15:42.11:0,42,502
chr10	88872548	.	G	GCT	1996.42	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-0.445;DP=556;FS=1.822;HRun=0;HaplotypeScore=106.0587;InbreedingCoeff=0.8691;MQ=72.64;MQ0=15;MQRankSum=1.048;QD=24.05;ReadPosRankSum=0.212;VQSLOD=4.1878;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:48.12:748,48,0	1/1:1,4:5:6.02:88,6,0	0/0:25,0:18:36.05:0,36,594	0/0:30,0:20:28.41:0,28,614	0/0:28,0:28:44.89:0,45,564	0/0:22,0:22:35.95:0,36,479	0/0:12,0:12:33.11:0,33,460	0/0:24,0:24:66.17:0,66,908	1/1:4,14:18:8.63:60,9,0	1/1:3,18:22:48.21:875,48,0	1/1:15,0:15:12.66:387,13,0	0/0:15,0:14:27.09:0,27,372	0/0:21,0:21:43.39:0,43,510	0/0:12,0:12:27.09:0,27,362	0/0:24,0:24:49.89:0,50,642	0/0:18,0:18:1.02:0,1,434	0/0:5,14:17:4.68:0,5,22	0/0:10,0:9:21.03:0,21,256	0/0:19,0:18:46.47:0,46,618	0/0:25,0:25:53.75:0,54,704	0/0:35,0:33:77.98:0,78,1034	0/0:13,0:13:24.08:0,24,337	0/0:13,0:13:22.57:0,23,310	0/0:36,0:36:57.05:0,57,715	0/0:27,0:27:40.84:0,41,546	0/0:16,0:16:43.03:0,43,615	0/0:21,0:21:30.85:0,31,497	0/0:8,0:8:18.06:0,18,241
chr10	88872549	.	C	CGTGT	1739.97	PASS	AB=0.782;AC=31;AF=0.620;AN=50;BaseQRankSum=-2.429;DP=589;FS=0.938;HRun=0;HaplotypeScore=146.1736;InbreedingCoeff=0.4247;MQ=70.36;MQ0=16;MQRankSum=1.808;QD=4.83;ReadPosRankSum=-1.408;VQSLOD=2.6318;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:22:2.74:12,3,0	1/1:9,0:9:5.67:37,6,0	./.	./.	0/0:27,0:27:8.28:0,8,49	0/0:25,0:25:5.60:0,6,38	0/0:13,0:12:5.67:0,6,36	./.	0/0:14,0:17:7.04:0,7,59	1/1:26,0:26:20.10:213,20,0	1/1:18,0:18:5.72:117,6,0	0/0:15,0:14:6.01:0,6,56	1/1:18,6:25:7.03:164,7,0	0/0:13,0:13:6.01:0,6,56	0/1:14,9:25:35.07:141,0,35	1/1:17,1:19:22.58:251,23,0	1/1:21,0:19:12.02:161,12,0	0/1:10,0:9:0:0,0,0	1/1:20,0:19:9.24:125,9,0	1/1:20,5:26:0.68:111,1,0	1/1:35,0:33:17.65:143,18,0	0/0:15,0:15:3:0,3,28	1/1:10,4:16:5.89:86,6,0	0/1:19,18:41:99:257,0,148	0/0:17,0:27:0.07:0,0,90	1/1:15,0:15:0.47:1,0,0	1/1:15,0:23:5.84:50,6,0	1/1:8,0:8:2.99:24,3,0
chr10	88872580	.	GTGTGTGTGTGTGTT	G	822.20	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=2.945;DP=589;FS=0.826;HRun=0;HaplotypeScore=196.5348;InbreedingCoeff=0.5593;MQ=54.89;MQ0=19;MQRankSum=-1.734;QD=6.14;ReadPosRankSum=0.597;VQSLOD=2.7109;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:38.28:0,38,464	0/0:10,0:10:10.82:0,11,201	0/0:23,0:12:26.16:0,26,283	0/0:19,0:9:20.65:0,21,148	1/1:25,1:26:9.02:178,9,0	0/1:26,0:26:77.21:84,0,77	0/1:17,0:15:23.50:178,0,23	0/0:29,0:28:58.01:0,58,1140	0/0:21,0:21:33.92:0,34,515	0/0:22,0:21:50.07:0,50,1685	0/0:14,0:14:17.90:0,18,637	1/1:7,11:17:6.02:185,6,0	0/0:22,0:21:33.09:0,33,1202	1/1:16,1:17:9.01:209,9,0	0/0:22,0:22:30.04:0,30,1089	0/0:16,0:16:43.07:0,43,1782	0/0:26,0:24:33.05:0,33,1096	0/1:12,0:11:54.17:54,0,213	0/0:17,0:15:35.73:0,36,956	0/0:19,0:19:29.34:0,29,1022	0/0:33,0:30:66.03:0,66,1347	1/1:18,0:17:6.47:89,6,0	0/0:15,0:15:25.11:0,25,398	0/0:50,0:50:77.94:0,78,2836	0/0:33,0:33:54.52:0,55,1768	0/0:14,0:14:30.03:0,30,746	0/0:21,0:21:29.81:0,30,635	0/0:5,0:5:11.51:0,12,132
chr10	88872582	.	GTGTGTGTGTGTT	G	1213.22	PASS	AB=0.813;AC=12;AF=0.214;AN=56;BaseQRankSum=1.114;DP=590;FS=0.000;HRun=0;HaplotypeScore=182.4276;InbreedingCoeff=0.6783;MQ=55.15;MQ0=18;MQRankSum=-2.215;QD=9.19;ReadPosRankSum=1.446;VQSLOD=2.5309;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:33.34:0,33,377	0/0:10,0:10:14.18:0,14,205	0/0:24,0:13:29.16:0,29,312	0/0:18,0:10:25.56:0,26,169	1/1:9,18:27:9.03:234,9,0	0/1:10,15:25:49.50:173,0,49	1/1:16,1:15:22.83:362,23,0	0/0:28,0:27:60.61:0,61,931	0/0:20,0:20:33.43:0,33,378	0/0:23,0:22:50.34:0,50,1405	0/0:15,0:15:23.63:0,24,582	1/1:17,1:17:6.02:197,6,0	0/0:23,0:22:36.01:0,36,1069	1/1:6,9:15:6.49:198,6,0	0/0:23,0:23:30.04:0,30,921	0/0:16,0:16:43.07:0,43,1501	0/0:24,0:22:33.05:0,33,939	0/1:12,0:11:99:101,0,138	0/0:17,0:15:35.75:0,36,831	0/0:19,0:19:29.51:0,30,856	0/0:35,0:32:74.81:0,75,1020	1/1:8,10:17:3.95:109,4,0	0/0:15,0:15:24.98:0,25,324	0/0:52,0:52:83.81:0,84,2394	0/0:32,0:32:54.52:0,55,1535	0/0:14,0:14:30:0,30,576	0/0:21,0:21:25.41:0,25,510	0/0:5,0:5:11.51:0,12,109
chr10	88872905	.	TAAC	T	1282.81	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=8.697;DP=569;FS=4.639;HRun=0;HaplotypeScore=80.5806;InbreedingCoeff=0.7399;MQ=73.59;MQ0=0;MQRankSum=-0.948;QD=28.51;ReadPosRankSum=2.544;VQSLOD=3.7883;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:57.19:915,57,0	0/0:5,0:5:12.04:0,12,265	0/0:8,0:8:24.07:0,24,415	0/1:12,0:12:14.89:15,0,520	0/0:36,0:36:87.17:0,87,1761	0/0:24,0:24:60.19:0,60,1281	0/0:25,0:25:72.25:0,72,1588	0/0:40,0:39:93.27:0,93,1751	1/1:0,10:10:30.10:482,30,0	0/0:22,0:22:66.22:0,66,1417	0/0:27,0:27:78.27:0,78,1661	0/0:22,0:22:66.14:0,66,1365	0/0:29,0:29:83.96:0,84,1794	0/0:20,0:20:57.20:0,57,1257	0/0:21,0:21:63.19:0,63,1307	0/0:17,0:17:51.15:0,51,1042	0/0:17,0:17:45.15:0,45,993	0/0:11,0:11:33.11:0,33,714	0/0:16,0:16:45.15:0,45,980	0/0:25,0:25:72.23:0,72,1529	0/0:17,0:17:45.13:0,45,948	0/0:19,0:19:45.14:0,45,933	0/0:22,0:22:60.21:0,60,1323	0/0:10,0:10:30.10:0,30,618	0/0:29,0:29:75.26:0,75,1655	0/0:30,0:30:90.29:0,90,1890	0/0:30,0:29:87.28:0,87,1851	0/0:2,0:2:6.02:0,6,132
chr10	88873136	.	T	TA	4673.31	PASS	AB=0.930;AC=38;AF=0.679;AN=56;BaseQRankSum=2.403;DP=592;FS=12.421;HRun=12;HaplotypeScore=90.2507;InbreedingCoeff=0.7920;MQ=67.03;MQ0=2;MQRankSum=-1.965;QD=11.74;ReadPosRankSum=-1.492;VQSLOD=2.8012;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:19:17.23:129,17,0	1/1:1,0:7:11.42:59,11,0	0/0:33,0:10:15.96:0,16,108	0/1:28,1:13:3.82:4,0,58	1/1:12,30:42:74.23:876,74,0	1/1:7,12:19:18.64:354,19,0	1/1:5,11:16:33.05:321,33,0	1/1:6,1:22:41.96:246,42,0	1/1:5,0:12:0.44:34,0,0	1/1:7,0:25:40.41:201,40,0	1/1:10,0:29:34.50:190,35,0	1/1:5,14:19:51.04:479,51,0	0/0:25,0:27:64.43:0,64,456	1/1:5,6:11:15.02:146,15,0	0/0:22,0:22:44.62:0,45,327	0/0:17,0:17:35.75:0,36,263	1/1:4,0:14:14.41:79,14,0	1/1:6,6:12:32.96:295,33,0	0/0:19,0:19:38.70:0,39,284	0/0:34,0:35:94.45:0,94,679	1/1:1,1:11:14.20:71,14,0	1/1:10,13:23:41.99:396,42,0	0/1:22,2:24:7.70:8,0,278	0/0:11,0:11:29.83:0,30,219	1/1:6,26:32:60.10:584,60,0	1/1:7,4:22:2.87:130,3,0	0/0:28,0:30:60.77:0,61,442	1/1:1,0:9:14.20:71,14,0
chr10	88873188	.	G	GA	4613.31	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=3.159;DP=581;FS=0.783;HRun=6;HaplotypeScore=74.6959;InbreedingCoeff=0.9982;MQ=74.79;MQ0=0;MQRankSum=-4.195;QD=33.19;ReadPosRankSum=1.008;VQSLOD=4.9328;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:42.05:0,42,417	0/0:8,0:8:24.03:0,24,232	0/0:15,0:15:36.07:0,36,360	0/0:12,0:12:30.05:0,30,293	1/1:2,31:33:90.03:1070,90,0	1/1:1,22:23:63.20:792,63,0	1/1:1,17:18:51.16:642,51,0	0/0:43,0:43:99:0,108,1096	0/0:9,0:9:21.05:0,21,214	0/0:20,0:20:60.09:0,60,598	0/0:15,0:15:35.87:0,36,349	1/1:0,12:12:30.10:377,30,0	0/0:26,0:26:68.97:0,69,696	1/1:2,9:11:27.56:341,28,0	0/0:20,0:20:57.13:0,57,581	0/0:12,0:12:33.06:0,33,330	0/0:15,0:15:33.07:0,33,336	1/1:2,14:16:42.13:526,42,0	0/0:34,0:34:93.21:0,93,949	0/0:43,0:43:99:0,114,1150	0/0:17,0:17:45.10:0,45,459	1/1:2,24:26:69.22:866,69,0	0/0:29,0:29:84.12:0,84,839	0/0:15,0:15:42.06:0,42,419	0/0:22,0:22:45.10:0,45,459	0/0:27,0:27:75.16:0,75,765	0/0:30,0:30:90.17:0,90,909	0/0:9,0:9:27.06:0,27,275
chr10	88874229	.	C	CACAT	11455.17	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-15.265;DP=605;FS=3.041;HRun=0;HaplotypeScore=88.0338;InbreedingCoeff=0.9973;MQ=84.65;MQ0=2;MQRankSum=-5.310;QD=60.93;ReadPosRankSum=1.885;VQSLOD=6.6372;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.15:0,45,828	1/1:0,12:12:30.10:770,30,0	0/0:25,0:25:69.24:0,69,1249	0/0:17,0:17:39.13:0,39,715	0/0:34,0:34:84.29:0,84,1536	0/0:25,0:25:69.21:0,69,1238	0/0:21,0:21:54.17:0,54,945	1/1:10,26:38:93.29:2182,93,0	0/0:28,0:28:81.28:0,81,1476	1/1:2,23:27:81.25:1967,81,0	1/1:0,27:26:60.21:1571,60,0	0/0:13,0:13:39.13:0,39,699	0/0:23,0:23:63.22:0,63,1144	0/0:16,0:16:42.13:0,42,720	0/0:19,0:19:57.18:0,57,1017	0/0:13,0:13:39.13:0,39,706	1/1:1,5:6:15.05:396,15,0	0/0:11,0:11:33.11:0,33,586	0/0:17,0:17:45.14:0,45,788	0/0:36,0:36:99:0,105,1829	1/1:0,17:17:39.13:1030,39,0	0/0:28,0:28:84.29:0,84,1545	0/0:26,0:26:72.25:0,72,1317	0/0:16,0:16:48.16:0,48,859	1/1:3,18:24:42.14:1109,42,0	1/1:3,20:23:63.22:1654,63,0	0/0:33,0:33:90.31:0,90,1648	1/1:3,10:13:30.10:776,30,0
chr10	88878645	.	TCCCCTCTCCTTC	T	6159.73	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.453;DP=552;FS=0.933;HRun=0;HaplotypeScore=183.8941;InbreedingCoeff=0.9366;MQ=72.52;MQ0=1;MQRankSum=-4.271;QD=38.02;ReadPosRankSum=-1.612;VQSLOD=4.2787;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,99,4417	1/1:0,4:4:3.01:109,3,0	0/0:23,0:19:32.12:0,32,477	0/0:31,0:25:23.90:0,24,476	0/0:11,0:11:30.05:0,30,967	0/0:21,0:21:57.17:0,57,2435	0/0:26,0:26:60.14:0,60,2154	1/1:3,19:22:54:821,54,0	0/0:21,0:21:57.18:0,57,2784	1/1:6,20:26:54.05:1279,54,0	1/1:0,8:8:14.97:451,15,0	0/0:27,0:27:69.19:0,69,2883	0/0:26,0:26:71.97:0,72,3686	0/0:19,0:19:57.16:0,57,2178	0/0:23,0:23:69.17:0,69,2300	0/0:25,0:25:72.18:0,72,3174	1/1:1,17:18:15.05:541,15,0	0/0:15,0:15:39.07:0,39,1730	0/0:18,0:18:36.10:0,36,1118	0/0:11,0:11:21.06:0,21,931	1/1:5,29:34:6.02:125,6,0	0/0:7,0:7:15.02:0,15,591	0/0:10,0:10:21.07:0,21,1082	0/0:22,0:22:54.15:0,54,2456	1/1:1,21:22:30.10:989,30,0	1/1:1,21:22:63.08:1574,63,0	0/0:15,0:15:36.10:0,36,1423	1/1:2,4:6:9.03:271,9,0
chr10	88878845	.	TA	T	3184.82	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.977;DP=541;FS=3.097;HRun=4;HaplotypeScore=52.4856;InbreedingCoeff=0.9958;MQ=74.74;MQ0=0;MQRankSum=-1.278;QD=28.95;ReadPosRankSum=0.088;VQSLOD=3.2269;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:63.20:0,63,862	0/0:14,0:14:36.12:0,36,504	0/0:15,0:15:45:0,45,550	0/0:9,0:9:27.03:0,27,329	0/0:23,0:23:66.22:0,66,912	0/0:22,0:22:66.21:0,66,906	0/0:20,0:20:57.19:0,57,796	1/1:0,34:34:99:1191,102,0	0/0:18,0:18:51.17:0,51,713	0/0:33,0:33:99:0,99,1340	0/0:17,0:17:51.16:0,51,698	0/0:16,0:16:48.14:0,48,637	0/0:13,0:13:39.13:0,39,546	0/0:13,0:13:36.12:0,36,502	0/0:14,0:14:39.04:0,39,488	0/0:16,0:16:48.13:0,48,634	0/0:21,0:21:60.17:0,60,819	0/0:12,0:12:33.10:0,33,443	0/0:21,0:21:48.15:0,48,656	0/0:44,0:44:99:0,120,1611	1/1:1,16:17:36.11:432,36,0	0/0:17,0:17:45.15:0,45,629	0/0:11,0:11:33.09:0,33,429	0/0:20,0:20:51.16:0,51,697	1/1:0,27:27:72.22:864,72,0	1/1:3,21:24:38.29:693,38,0	0/0:15,0:15:39.13:0,39,535	1/1:1,7:8:15.05:180,15,0
chr10	88879002	.	GTC	G	907.58	PASS	AB=0.887;AC=37;AF=0.771;AN=48;BaseQRankSum=2.621;DP=484;FS=7.459;HRun=0;HaplotypeScore=94.2935;InbreedingCoeff=0.5348;MQ=65.39;MQ0=16;MQRankSum=0.186;QD=2.86;ReadPosRankSum=2.249;VQSLOD=1.4529;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:22:23.72:180,24,0	./.	./.	./.	1/1:16,0:15:0.81:2,1,0	1/1:26,0:27:12.04:93,12,0	1/1:20,2:21:17.58:122,18,0	0/0:39,0:38:11.94:0,12,90	0/1:16,0:16:7.12:7,0,120	1/1:7,0:14:17.04:84,17,0	1/1:2,0:7:2.77:14,3,0	1/1:16,0:14:17.74:137,18,0	1/1:12,0:13:2.50:10,3,0	0/1:14,0:15:0:0,0,0	1/1:6,8:14:5.81:31,6,0	1/1:16,0:15:2.61:11,3,0	1/1:14,0:13:2.96:19,3,0	1/1:7,0:6:11.93:89,12,0	1/1:14,0:21:21.77:114,22,0	1/1:11,0:19:0.47:1,0,0	0/0:20,0:17:8.99:0,9,76	1/1:14,0:14:11.92:94,12,0	./.	1/1:6,7:13:2.90:16,3,0	0/1:8,0:12:0:0,0,0	0/0:17,0:16:11.95:0,12,102	1/1:12,0:13:6.12:23,6,0	0/0:11,0:11:8.94:0,9,66
chr10	88879037	.	TCTCTCTCTCA	T	1671.55	PASS	AB=1.000;AC=25;AF=0.481;AN=52;BaseQRankSum=3.835;DP=433;FS=2.854;HRun=0;HaplotypeScore=132.0129;InbreedingCoeff=0.0360;MQ=47.58;MQ0=32;MQRankSum=1.585;QD=5.59;ReadPosRankSum=1.632;VQSLOD=2.0934;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:18:52.53:53,0,250	0/0:5,0:5:11.88:0,12,86	./.	./.	0/0:18,0:16:5.58:0,6,74	0/1:21,0:21:26.24:26,0,219	0/1:21,0:19:60.97:61,0,121	0/0:22,0:22:24.08:0,24,537	0/0:27,0:27:56.53:0,57,1078	0/1:14,0:14:71.23:308,0,71	0/1:15,0:13:46.75:47,0,58	0/1:17,0:14:40.89:41,0,291	0/1:15,0:14:5.54:32,0,6	0/0:18,0:17:2.76:0,3,50	1/1:20,0:20:26.49:228,26,0	1/1:21,0:19:2.75:38,3,0	0/1:12,0:10:74.58:75,0,78	0/1:10,0:9:54.51:55,0,183	1/1:16,0:14:11.66:429,12,0	1/1:12,0:12:5.84:33,6,0	0/0:23,0:16:15.05:0,15,432	0/0:14,0:13:7.42:0,7,123	0/1:10,0:9:16.31:18,0,16	1/1:21,0:21:12.01:108,12,0	1/1:13,0:12:6:77,6,0	0/1:18,0:15:8.21:8,0,741	1/1:10,11:20:9.48:205,9,0	0/0:5,0:4:9.03:0,9,203
chr10	88879039	.	TCTCTCTCA	T	2047.28	PASS	AB=0.959;AC=27;AF=0.519;AN=52;BaseQRankSum=2.525;DP=434;FS=1.955;HRun=0;HaplotypeScore=125.9951;InbreedingCoeff=0.0157;MQ=47.64;MQ0=32;MQRankSum=2.933;QD=6.50;ReadPosRankSum=2.255;VQSLOD=2.4128;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:18:99:128,0,120	0/0:5,0:5:11.88:0,12,86	./.	./.	0/0:18,0:16:2.19:0,2,24	0/1:21,0:21:71.44:93,0,71	0/1:20,0:18:37.43:150,0,37	0/0:21,0:22:21:0,21,359	0/0:25,0:25:32.11:0,32,756	0/1:14,0:14:71.24:223,0,71	0/1:16,0:14:28.14:28,0,80	0/1:17,0:14:61.40:61,0,133	1/1:4,11:14:6:106,6,0	0/0:19,0:18:2.99:0,3,25	1/1:20,0:20:26.52:278,27,0	0/1:4,18:21:17.94:77,0,18	0/1:12,0:10:63.93:64,0,78	0/1:10,0:9:66.57:74,0,67	1/1:16,0:14:29.68:468,30,0	1/1:12,0:12:5.91:53,6,0	0/0:24,0:17:15.02:0,15,305	0/1:14,0:13:39.16:41,0,39	1/1:11,0:10:5.18:35,5,0	1/1:21,0:21:12.05:131,12,0	1/1:13,0:12:6:63,6,0	0/1:18,0:15:8.23:8,0,498	1/1:20,0:19:9.03:136,9,0	0/0:5,0:4:9.03:0,9,181
chr10	88879043	.	TCTCA	T	1631.14	PASS	AB=0.930;AC=34;AF=0.654;AN=52;BaseQRankSum=1.680;DP=441;FS=6.380;HRun=0;HaplotypeScore=112.0032;InbreedingCoeff=0.3724;MQ=47.43;MQ0=36;MQRankSum=2.051;QD=4.71;ReadPosRankSum=2.055;VQSLOD=1.4927;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:21:57.76:137,0,58	0/0:5,0:5:11.88:0,12,86	./.	./.	1/1:12,0:14:0.87:2,1,0	1/1:22,0:22:32.24:230,32,0	1/1:23,0:21:18.47:135,18,0	0/0:23,0:21:11.94:0,12,90	0/0:23,0:23:16.59:0,17,328	0/1:15,0:15:51.61:52,0,98	0/0:17,0:14:0.94:0,1,81	1/1:18,0:15:34.75:239,35,0	1/1:15,0:14:1.79:33,2,0	0/1:5,13:17:0:0,0,0	1/1:20,0:20:26.56:188,27,0	0/1:23,0:21:17.94:30,0,18	0/1:13,0:11:27.99:28,0,77	1/1:10,0:9:26.78:191,27,0	1/1:16,0:14:27.63:149,28,0	1/1:15,0:15:9.35:63,9,0	0/0:22,0:16:11.98:0,12,98	1/1:13,0:12:11.92:94,12,0	1/1:11,0:10:5.38:36,5,0	1/1:22,0:22:11.31:87,11,0	1/1:13,0:12:5.95:44,6,0	0/1:17,0:14:20.38:20,0,99	1/1:20,0:19:7.87:45,8,0	0/0:5,0:4:8.94:0,9,65
chr10	88879045	.	TCACACACACACACA	T	213.52	PASS	AB=0.824;AC=7;AF=0.135;AN=52;BaseQRankSum=2.204;DP=450;FS=1.808;HRun=0;HaplotypeScore=162.7405;InbreedingCoeff=0.3315;MQ=46.99;MQ0=35;MQRankSum=-1.149;QD=3.95;ReadPosRankSum=-1.293;VQSLOD=2.4845;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:26:11.76:0,12,818	0/0:5,0:5:12.04:0,12,640	./.	./.	1/1:17,0:14:0.89:2,1,0	0/0:21,0:21:24.55:0,25,643	0/0:18,0:23:6.91:0,7,80	0/0:24,0:22:17.92:0,18,349	0/0:24,0:24:30.10:0,30,1608	0/0:15,0:15:35.33:0,35,1157	0/0:17,0:14:12.51:0,13,684	0/0:17,0:15:21.07:0,21,511	0/0:15,0:14:11.90:0,12,243	1/1:18,0:17:0.42:1,0,0	0/0:20,0:20:20.79:0,21,763	0/0:23,0:21:6.02:0,6,242	0/0:14,0:12:27.09:0,27,1191	0/0:11,0:10:21.07:0,21,465	0/0:16,0:14:14.41:0,14,421	0/0:15,0:15:9:0,9,250	0/0:14,7:15:3.01:0,3,173	0/0:10,0:14:3.01:0,3,72	0/0:11,0:10:5.42:0,5,246	0/0:22,0:22:12.51:0,13,425	0/0:15,0:14:5.98:0,6,157	0/1:11,1:11:99:272,0,128	0/0:20,0:19:14.63:0,15,305	1/1:5,0:4:3.01:31,3,0
chr10	88879533	.	CAGAGAGAG	C	1370.87	PASS	AB=1.000;AC=25;AF=0.521;AN=48;BaseQRankSum=4.911;DP=358;FS=6.331;HRun=0;HaplotypeScore=121.6616;InbreedingCoeff=0.6593;MQ=55.58;MQ0=6;MQRankSum=-6.071;QD=10.88;ReadPosRankSum=1.432;VQSLOD=2.1535;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:6:3.01:48,3,0	1/1:2,4:6:9.03:227,9,0	./.	./.	0/0:17,0:17:27.09:0,27,916	0/0:12,0:11:6.02:0,6,176	0/0:22,0:22:26.27:0,26,886	0/0:20,0:17:6.02:0,6,82	1/1:6,0:6:1.73:5,2,0	1/1:14,7:19:21.07:461,21,0	1/1:7,2:9:0.42:0,0,0	0/0:14,0:12:18.06:0,18,416	1/1:2,0:2:3.01:39,3,0	0/0:6,0:9:8.87:0,9,277	1/1:8,0:8:2.87:39,3,0	1/1:9,0:9:21.06:252,21,0	./.	0/0:3,0:7:9.03:0,9,315	./.	0/1:20,0:20:6.32:14,0,6	0/0:21,0:21:36.07:0,36,1074	0/0:14,0:15:12.51:0,13,495	1/1:13,0:13:17.92:247,18,0	1/1:2,0:2:2.74:12,3,0	1/1:12,0:17:11.89:183,12,0	0/0:22,0:20:45.15:0,45,1147	1/1:7,0:7:4.05:13,4,0	0/0:5,0:4:9.03:0,9,251
chr10	88879557	.	GA	G	261.36	PASS	AB=0.833;AC=12;AF=0.214;AN=56;BaseQRankSum=6.588;DP=381;FS=7.993;HRun=1;HaplotypeScore=97.0139;InbreedingCoeff=0.6129;MQ=36.47;MQ0=31;MQRankSum=-2.374;QD=5.33;ReadPosRankSum=2.144;VQSLOD=0.3838;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:6:4.83:0,5,43	1/1:6,0:6:1.41:3,1,0	0/0:34,0:7:18.53:0,19,223	0/0:56,1:10:7.83:0,8,233	0/0:21,0:20:36.11:0,36,515	0/0:10,0:9:11.88:0,12,126	0/0:24,0:24:37.19:0,37,520	0/0:18,0:12:31.88:0,32,367	0/0:3,0:2:6.02:0,6,75	0/0:15,0:14:25.19:0,25,312	0/0:12,0:12:5.96:0,6,75	0/0:13,0:11:20.10:0,20,280	1/1:2,1:3:3:28,3,0	0/0:11,0:11:10.87:0,11,139	1/1:1,2:3:2.99:29,3,0	1/1:0,7:7:20.97:187,21,0	0/0:2,0:2:6.02:0,6,75	0/0:8,0:8:18.05:0,18,220	0/0:3,0:3:6.02:0,6,75	0/0:22,0:20:15.83:0,16,115	0/0:25,0:24:50.19:0,50,693	0/0:14,0:13:15.05:0,15,230	1/1:7,10:16:17.39:152,17,0	0/1:1,1:2:0.02:0,0,3	0/1:11,0:11:0.64:1,0,30	0/0:21,0:16:48.14:0,48,661	0/0:5,0:5:13.42:0,13,101	0/0:6,0:5:9.03:0,9,137
chr10	88879561	.	GA	G	282.01	PASS	AB=0.833;AC=16;AF=0.286;AN=56;BaseQRankSum=7.487;DP=379;FS=3.270;HRun=1;HaplotypeScore=98.4103;InbreedingCoeff=0.6081;MQ=42.35;MQ0=31;MQRankSum=-3.857;QD=4.70;ReadPosRankSum=1.044;VQSLOD=0.6375;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:6:7.53:0,8,62	1/1:6,0:6:1.41:3,1,0	0/0:41,0:8:18.01:0,18,189	0/0:59,0:10:1.85:0,2,164	0/0:20,0:19:36.11:0,36,515	0/0:10,0:9:11.96:0,12,161	0/0:23,0:23:31.20:0,31,444	0/0:16,0:10:28.89:0,29,320	0/1:3,0:2:18.09:18,0,32	0/0:16,0:15:25.15:0,25,321	0/0:12,0:12:5.96:0,6,75	0/0:11,0:9:20.10:0,20,273	1/1:0,2:2:3.46:24,3,0	0/0:11,0:11:13.91:0,14,177	1/1:0,2:2:2.98:24,3,0	1/1:0,7:7:20.71:149,21,0	0/0:2,0:2:6.02:0,6,75	0/0:9,0:9:15.02:0,15,166	0/0:2,0:2:3.01:0,3,38	1/1:13,5:16:11.75:47,12,0	0/0:25,0:24:50.20:0,50,697	0/0:15,0:14:15.05:0,15,230	1/1:2,14:15:17.34:139,17,0	0/1:1,1:2:1.32:6,0,1	0/0:10,0:10:0.97:0,1,6	0/0:22,0:17:48.14:0,48,661	1/1:3,1:4:9.66:39,10,0	0/0:6,0:5:9.03:0,9,137
chr10	88879563	.	GA	G	536.09	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=7.378;DP=378;FS=14.498;HRun=1;HaplotypeScore=93.9704;InbreedingCoeff=0.7149;MQ=44.10;MQ0=32;MQRankSum=-4.869;QD=9.24;ReadPosRankSum=0.877;VQSLOD=0.0078;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:5:6.90:0,7,77	0/0:7,0:7:2.05:0,2,20	0/0:42,0:9:17.93:0,18,190	0/0:63,0:9:17.69:0,18,200	0/0:20,0:19:36.11:0,36,515	0/0:11,0:10:11.96:0,12,161	0/0:22,0:22:31.25:0,31,459	0/0:15,0:9:24.58:0,25,221	0/0:3,0:2:1.87:0,2,36	0/0:15,0:14:22.54:0,23,291	0/0:12,0:12:8.92:0,9,91	0/0:11,0:9:20.10:0,20,279	1/1:2,0:2:5.96:44,6,0	0/0:11,0:11:13.91:0,14,177	1/1:2,0:2:2.98:25,3,0	1/1:7,0:7:20.83:162,21,0	0/0:2,0:2:6.02:0,6,75	0/0:7,0:7:12.03:0,12,144	0/0:2,0:2:3.01:0,3,38	1/1:7,9:14:12.38:108,12,0	0/0:25,0:24:50.17:0,50,670	0/0:15,0:14:15.05:0,15,230	1/1:15,0:15:20.85:169,21,0	0/1:2,0:2:0.91:32,0,1	1/1:9,0:9:7.05:39,7,0	0/0:22,0:17:48.14:0,48,661	1/1:1,3:4:12:134,12,0	0/0:7,0:6:9.03:0,9,137
chr10	88879565	.	GA	G	373.74	PASS	AB=0.847;AC=17;AF=0.304;AN=56;BaseQRankSum=8.241;DP=373;FS=8.092;HRun=1;HaplotypeScore=94.4132;InbreedingCoeff=0.6045;MQ=46.21;MQ0=31;MQRankSum=-6.408;QD=4.73;ReadPosRankSum=0.884;VQSLOD=0.0285;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:5:7.84:0,8,80	0/1:6,1:7:0.71:1,0,32	0/0:44,0:10:20.94:0,21,235	0/0:63,0:11:14.68:0,15,191	0/0:20,0:19:36.11:0,36,515	0/0:11,0:10:11.96:0,12,161	0/0:22,0:22:31.25:0,31,461	0/0:13,0:8:22.75:0,23,150	0/0:3,0:2:0.28:0,0,33	0/1:14,0:13:22.71:23,0,228	0/0:9,0:9:6.02:0,6,75	0/0:11,0:9:20.10:0,20,279	1/1:0,1:2:5.86:38,6,0	0/0:11,0:11:16.89:0,17,198	1/1:0,0:2:2.98:24,3,0	1/1:0,3:7:20.70:148,21,0	0/0:2,0:2:6.02:0,6,75	0/0:7,0:7:12.03:0,12,144	0/0:2,0:2:3.01:0,3,38	1/1:11,5:14:11.23:73,11,0	0/0:24,0:23:45.88:0,46,558	0/0:15,0:14:15.05:0,15,230	1/1:2,6:15:19.65:144,20,0	0/1:1,0:2:0.97:13,0,1	1/1:9,0:9:3.45:9,3,0	0/0:22,0:17:48.14:0,48,648	1/1:3,1:4:11.27:73,11,0	0/0:7,0:6:9.03:0,9,133
chr10	88879567	.	GAGA	G	1314.77	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=7.667;DP=378;FS=0.000;HRun=0;HaplotypeScore=96.2289;InbreedingCoeff=0.3547;MQ=45.93;MQ0=31;MQRankSum=-5.062;QD=8.88;ReadPosRankSum=-0.616;VQSLOD=3.0153;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:5:2.55:0,3,68	0/1:7,0:7:24.46:24,0,26	0/0:47,0:11:22.18:0,22,248	0/0:65,0:11:14.66:0,15,189	0/0:20,0:19:36.59:0,37,724	0/0:11,0:10:15.01:0,15,214	0/0:22,0:22:31.66:0,32,657	0/1:12,0:7:2.83:219,0,3	0/0:3,0:2:2.68:0,3,37	0/1:14,0:13:31.47:31,0,205	0/0:8,0:8:6.02:0,6,74	0/0:11,0:9:21.41:0,21,366	1/1:2,0:2:5.99:62,6,0	0/0:11,0:11:17.25:0,17,253	1/1:2,0:2:2.97:41,3,0	1/1:7,0:7:21.06:269,21,0	0/0:2,0:2:0.68:0,1,33	0/0:7,0:7:15.05:0,15,253	1/1:3,0:3:4.56:44,5,0	1/1:7,9:14:17.35:183,17,0	0/1:24,0:23:99:103,0,118	0/0:15,0:14:16.46:0,16,335	1/1:16,0:15:20.86:286,21,0	0/1:2,0:2:6.17:31,0,6	1/1:10,0:10:10.73:45,11,0	0/1:22,0:17:29.17:29,0,141	1/1:2,2:4:11.95:118,12,0	0/1:7,0:6:12.93:13,0,14
chr10	88879569	.	GA	G	1421.06	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=5.684;DP=376;FS=1.601;HRun=1;HaplotypeScore=92.7796;InbreedingCoeff=0.7549;MQ=46.11;MQ0=29;MQRankSum=-1.913;QD=12.25;ReadPosRankSum=1.507;VQSLOD=2.3573;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:5:8.51:0,9,82	0/0:7,0:7:5.67:0,6,43	0/0:47,0:11:23.94:0,24,254	0/0:63,0:12:14.53:0,15,188	0/0:21,0:20:33.11:0,33,476	0/0:11,0:10:14.89:0,15,161	0/0:22,0:22:31.25:0,31,460	1/1:3,9:7:21.06:265,21,0	0/0:3,0:2:3:0,3,37	0/0:13,0:13:24.61:0,25,262	0/0:9,0:9:6.02:0,6,74	0/0:11,0:9:19.88:0,20,277	1/1:1,1:2:5.98:49,6,0	0/0:11,0:11:16.41:0,16,211	1/1:2,0:2:2.99:29,3,0	1/1:4,3:7:20.61:174,21,0	0/0:2,0:2:0.68:0,1,33	0/0:7,0:7:15.04:0,15,175	1/1:2,1:3:4.56:44,5,0	1/1:10,6:14:17.77:160,18,0	1/1:23,1:23:35.55:269,36,0	0/0:15,0:14:15.05:0,15,229	1/1:10,6:15:20.93:211,21,0	0/1:2,0:2:0.91:31,0,1	0/0:10,0:10:2.18:0,2,4	1/1:19,2:16:34.54:224,35,0	1/1:3,1:4:11.70:99,12,0	1/1:7,0:6:8.49:64,8,0
chr10	88879570	.	A	AG	2016.22	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=4.791;DP=386;FS=6.056;HRun=1;HaplotypeScore=100.2263;InbreedingCoeff=0.7357;MQ=47.53;MQ0=29;MQRankSum=-2.098;QD=15.16;ReadPosRankSum=0.649;VQSLOD=3.3646;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:5:8.98:0,9,94	0/0:7,0:7:11.72:0,12,86	0/0:49,0:13:21.81:0,22,253	0/0:65,0:14:21.33:0,21,208	0/0:20,0:19:31.01:0,31,347	0/0:11,0:10:11.70:0,12,133	0/0:22,0:22:30.70:0,31,386	1/1:12,0:7:21.06:265,21,0	0/0:3,0:2:3.01:0,3,38	0/0:13,0:13:35.50:0,36,342	0/0:9,0:9:6:0,6,75	0/1:10,0:8:12:12,0,191	1/1:2,0:2:5.88:37,6,0	0/0:11,0:11:17.37:0,17,202	1/1:2,0:2:2.90:16,3,0	1/1:8,0:8:18.88:107,19,0	0/0:2,0:2:3.01:0,3,38	0/0:8,0:8:11.52:0,12,118	1/1:4,0:4:3.01:40,3,0	1/1:20,0:18:22.65:172,23,0	1/1:2,22:23:47.60:623,48,0	0/0:15,0:14:14.51:0,15,191	1/1:18,0:17:20.35:134,20,0	1/1:1,0:2:5.61:46,6,0	0/0:10,0:10:8.64:0,9,47	1/1:5,15:15:41.62:564,42,0	1/1:4,0:4:8.63:72,9,0	1/1:1,6:6:9.03:130,9,0
chr10	88880572	.	A	AT	9250.37	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=1.987;DP=675;FS=2.091;HRun=6;HaplotypeScore=72.9302;InbreedingCoeff=0.9994;MQ=83.32;MQ0=1;MQRankSum=-1.684;QD=33.27;ReadPosRankSum=2.608;VQSLOD=5.0702;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:29:78.25:979,78,0	0/0:8,0:8:24.04:0,24,237	0/0:26,0:26:63.02:0,63,628	0/0:20,0:20:45.05:0,45,438	0/0:41,0:41:99:0,117,1194	0/0:26,0:26:78.18:0,78,795	0/0:11,0:11:27.06:0,27,275	0/0:39,0:39:96.20:0,96,973	1/1:1,15:16:36.11:447,36,0	0/0:32,0:32:84.17:0,84,851	0/0:36,0:36:99:0,99,995	0/0:23,0:23:69.16:0,69,704	1/1:1,29:30:84.27:1056,84,0	0/0:27,0:27:78.16:0,78,789	1/1:0,19:19:54.17:679,54,0	1/1:0,28:28:78.25:981,78,0	0/0:17,0:17:51.12:0,51,520	0/0:11,0:11:30.07:0,30,306	1/1:5,14:18:42.13:528,42,0	1/1:1,39:40:99:1396,111,0	0/0:11,0:11:30.07:0,30,306	0/0:21,0:21:63.14:0,63,643	1/1:2,25:27:66.21:830,66,0	1/1:1,17:20:57.17:699,57,0	1/1:1,13:14:39.12:491,39,0	0/0:31,0:31:87.19:0,87,888	1/1:4,31:36:93.30:1163,93,0	0/0:17,0:17:51.12:0,51,520
chr10	88880937	.	G	GGAGA	7186.38	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=4.409;DP=486;FS=0.898;HRun=0;HaplotypeScore=138.1281;InbreedingCoeff=0.9829;MQ=66.32;MQ0=2;MQRankSum=-3.418;QD=24.44;ReadPosRankSum=0.723;VQSLOD=4.2939;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,4:14:22.32:455,22,0	0/0:8,0:8:18.01:0,18,242	0/0:19,0:17:28.30:0,28,612	0/0:18,0:14:17.11:0,17,428	1/1:32,0:32:65.46:586,65,0	1/1:23,0:23:51.02:607,51,0	1/1:18,0:18:29.23:345,29,0	0/0:28,0:28:44.66:0,45,466	1/1:4,3:7:18.06:373,18,0	0/0:18,0:18:38.83:0,39,672	0/0:13,0:12:20.10:0,20,369	1/1:15,0:15:38.95:363,39,0	1/1:10,0:10:21.07:282,21,0	1/1:18,0:18:41.36:410,41,0	1/1:12,0:12:21.07:349,21,0	1/1:11,0:11:24.08:415,24,0	0/0:24,0:23:54.04:0,54,814	1/1:5,0:5:11.91:88,12,0	1/1:17,0:16:48.11:663,48,0	1/1:16,0:16:24.08:353,24,0	0/0:16,0:16:15.39:0,15,363	1/1:11,0:11:20.52:183,21,0	1/1:21,0:21:18.05:287,18,0	1/1:17,0:17:18.53:249,19,0	1/1:24,0:24:30.04:454,30,0	0/0:27,0:27:53.90:0,54,706	1/1:22,0:22:47.96:726,48,0	0/0:20,0:20:31.85:0,32,310
chr10	88880938	.	G	GAG	4475.69	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=8.142;DP=476;FS=2.543;HRun=0;HaplotypeScore=131.0785;InbreedingCoeff=0.7175;MQ=64.57;MQ0=3;MQRankSum=-4.137;QD=12.79;ReadPosRankSum=-0.693;VQSLOD=4.8086;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:13:21.02:208,21,0	0/0:7,0:8:17.81:0,18,152	0/0:20,0:17:34.74:0,35,445	0/0:16,0:12:26.90:0,27,330	1/1:32,0:32:61.49:316,61,0	1/1:22,0:22:49.34:355,49,0	1/1:17,0:17:28.77:217,29,0	0/0:27,0:27:8.40:0,8,79	1/1:9,0:9:17.94:151,18,0	0/0:17,0:17:41.79:0,42,526	0/0:13,0:12:14.82:0,15,249	1/1:15,0:15:36.99:192,37,0	1/1:10,0:10:20.88:163,21,0	1/1:18,0:18:40.38:241,40,0	1/1:12,0:12:20.97:214,21,0	1/1:11,0:11:23.98:230,24,0	0/0:23,0:22:53.70:0,54,577	1/1:5,0:5:11.08:50,11,0	1/1:17,0:16:47.93:435,48,0	1/1:15,0:15:23.93:213,24,0	0/1:15,0:15:43.74:44,0,53	1/1:11,0:11:20.28:100,20,0	1/1:21,0:21:17.33:207,17,0	1/1:17,0:17:17.83:141,18,0	1/1:15,8:24:29.76:375,30,0	0/1:27,0:27:99:102,0,144	1/1:21,0:21:48.49:446,48,0	0/1:17,0:17:37.62:77,0,38
chr10	88880940	.	G	GA	5206.98	PASS	AB=0.983;AC=39;AF=0.696;AN=56;BaseQRankSum=5.517;DP=480;FS=2.839;HRun=1;HaplotypeScore=133.1074;InbreedingCoeff=0.5985;MQ=62.89;MQ0=3;MQRankSum=-2.599;QD=13.70;ReadPosRankSum=0.152;VQSLOD=4.1837;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:12:20.22:146,20,0	0/0:8,0:8:19.23:0,19,181	0/0:21,0:17:41.70:0,42,538	0/0:17,0:11:27.07:0,27,350	1/1:0,31:31:66.09:809,66,0	1/1:0,22:22:50.82:537,51,0	1/1:0,16:16:27.08:335,27,0	0/1:26,0:25:12.61:16,0,13	0/1:10,0:11:6.68:96,0,7	0/0:17,0:17:45.05:0,45,534	0/0:16,0:14:23.52:0,24,273	1/1:0,15:15:38.91:426,39,0	1/1:0,1:10:20.49:122,20,0	1/1:0,18:18:41.84:442,42,0	1/1:2,1:13:20.77:175,21,0	1/1:0,0:11:23.65:172,24,0	0/0:21,0:20:53.67:0,54,553	1/1:0,5:5:12.04:155,12,0	1/1:2,0:17:49.95:345,50,0	1/1:3,2:18:25.87:155,26,0	0/1:15,0:15:12.33:55,0,12	1/1:0,11:11:21.40:230,21,0	1/1:1,1:20:17.43:134,17,0	1/1:3,1:17:21.12:138,21,0	1/1:12,11:23:26.32:227,26,0	0/1:27,0:27:54.49:120,0,54	1/1:4,0:23:55.08:320,55,0	0/1:16,0:16:8.12:52,0,8
chr10	88880941	.	G	GA	65.63	PASS	AB=0.989;AC=7;AF=0.125;AN=56;BaseQRankSum=4.398;DP=469;FS=29.240;HRun=0;HaplotypeScore=148.1067;InbreedingCoeff=0.1255;MQ=62.67;MQ0=4;MQRankSum=-2.980;QD=0.69;ReadPosRankSum=-4.544;VQSLOD=-0.6256;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:12:8.61:9,0,30	0/0:8,0:8:22.20:0,22,203	0/0:22,0:17:32.79:0,33,512	0/0:17,0:11:27.02:0,27,350	0/0:31,0:31:47.06:0,47,171	0/0:22,0:22:9.77:0,10,80	0/1:15,0:15:8.26:8,0,21	0/0:31,0:30:47.01:0,47,214	0/0:11,0:11:7.33:0,7,59	0/0:17,0:17:48.10:0,48,581	0/0:16,0:14:21.35:0,21,251	0/0:15,0:15:21.98:0,22,82	0/0:8,1:9:18.79:0,19,84	0/0:18,0:18:0.47:0,0,32	0/1:10,0:10:19.25:19,0,26	0/0:9,0:9:0.23:0,0,32	0/0:20,0:19:50.93:0,51,550	0/0:5,0:5:8.58:0,9,28	0/1:16,0:15:5.69:6,0,116	0/0:16,0:16:10.16:0,10,67	0/0:15,0:15:42.97:0,43,229	0/0:10,0:10:16.75:0,17,61	0/1:17,1:17:14.40:31,0,14	0/0:15,1:16:10.11:0,10,54	1/1:12,11:23:17.90:118,18,0	0/0:27,0:27:75.29:0,75,406	0/0:23,0:23:14.88:0,15,152	0/0:16,0:16:40.70:0,41,234
chr10	88880949	.	G	GAGATAGAT	6308.39	PASS	AB=1.000;AC=41;AF=0.976;AN=42;DP=568;FS=0.000;HRun=0;HaplotypeScore=231.3864;InbreedingCoeff=0.0820;MQ=53.56;MQ0=9;QD=13.96;VQSLOD=3.7103;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:6,4:8:15.05:593,15,0	./.	./.	1/1:41,0:37:3:25,3,0	1/1:23,0:21:6.02:208,6,0	1/1:16,0:16:6.02:151,6,0	1/1:39,0:38:18.02:206,18,0	1/1:5,2:8:9.03:362,9,0	1/1:16,4:18:27.06:815,27,0	1/1:16,3:18:2.99:24,3,0	1/1:16,0:15:2.88:25,3,0	1/1:17,0:14:9.02:197,9,0	1/1:18,0:18:5.93:207,6,0	1/1:14,0:12:3.01:104,3,0	1/1:13,0:12:9.03:312,9,0	./.	./.	1/1:20,0:16:5.99:115,6,0	1/1:29,0:25:6.02:189,6,0	./.	1/1:18,0:15:9.03:310,9,0	./.	0/1:16,0:16:0.23:0,0,0	1/1:33,0:31:21.05:653,21,0	1/1:28,0:29:24.06:772,24,0	1/1:31,0:26:27.09:730,27,0	1/1:11,0:14:9.03:312,9,0
chr10	88882168	.	TTTTTG	T	11906.67	PASS	AB=0.864;AC=41;AF=0.732;AN=56;BaseQRankSum=10.997;DP=707;FS=4.640;HRun=0;HaplotypeScore=169.6282;InbreedingCoeff=0.6900;MQ=58.73;MQ0=13;MQRankSum=-8.962;QD=23.96;ReadPosRankSum=4.042;VQSLOD=4.1402;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,12:22:23.13:253,23,0	0/0:7,0:7:21.04:0,21,443	0/0:50,0:24:35.60:0,36,528	0/0:78,0:38:13.68:0,14,618	1/1:3,29:32:72:1014,72,0	1/1:4,18:21:24.08:412,24,0	1/1:6,11:17:18.06:298,18,0	0/1:34,0:34:71.25:354,0,71	1/1:6,24:30:45.12:769,45,0	0/0:30,0:30:66.21:0,66,1616	0/0:19,0:19:43.67:0,44,1043	1/1:3,8:11:12.04:207,12,0	1/1:5,9:14:33.01:475,33,0	1/1:5,17:22:27.09:426,27,0	1/1:5,18:23:39.13:677,39,0	1/1:1,18:19:45.15:792,45,0	0/0:25,0:25:54.05:0,54,1293	0/1:4,9:13:13.43:142,0,13	1/1:9,16:24:47.97:610,48,0	1/1:8,28:35:81.12:1317,81,0	1/1:16,0:16:2.27:249,2,0	1/1:6,19:25:44.89:644,45,0	1/1:0,17:17:33.05:592,33,0	1/1:6,17:23:8.56:129,9,0	1/1:1,15:16:36.12:637,36,0	1/1:31,0:30:21.71:542,22,0	1/1:7,29:35:66.22:1208,66,0	0/1:12,0:12:7.94:158,0,8
chr10	88882184	.	TTTTGG	T	9007.34	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=6.281;DP=678;FS=11.828;HRun=0;HaplotypeScore=183.0521;InbreedingCoeff=0.0050;MQ=59.46;MQ0=15;MQRankSum=-8.405;QD=19.08;ReadPosRankSum=9.794;VQSLOD=2.5257;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:22:81.20:81,0,115	0/0:9,0:9:21.05:0,21,349	0/0:48,0:26:42.76:0,43,724	0/0:72,0:34:36.56:0,37,744	0/1:32,0:32:71.87:523,0,72	0/1:25,0:24:99:221,0,115	0/1:15,0:15:59.99:156,0,60	1/1:4,23:27:69.07:936,69,0	0/1:28,0:28:19.93:444,0,20	0/0:31,0:31:32.28:0,32,1251	0/0:23,0:23:20.15:0,20,897	1/1:8,0:8:12:136,12,0	1/1:12,0:12:2.87:247,3,0	0/1:21,0:21:69.09:229,0,69	0/1:23,0:23:74.96:385,0,75	0/1:22,0:22:38.93:455,0,39	0/0:23,0:23:33.12:0,33,1014	0/1:11,0:11:9.74:81,0,10	1/1:18,0:17:27.22:282,27,0	0/1:33,0:32:10.02:753,0,10	1/1:0,14:14:24.08:479,24,0	0/1:24,0:24:81.11:334,0,81	1/1:18,0:18:13.97:375,14,0	0/1:24,0:24:63.33:63,0,81	0/1:18,0:17:31.93:371,0,32	1/1:1,33:34:99:1410,99,0	0/1:33,0:32:0.84:746,0,1	1/1:1,8:9:15.05:299,15,0
chr10	88883394	.	A	AAT	5953.54	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=1.622;DP=340;FS=3.133;HRun=0;HaplotypeScore=62.3215;InbreedingCoeff=0.7389;MQ=72.03;MQ0=1;MQRankSum=-3.871;QD=22.99;ReadPosRankSum=-1.771;VQSLOD=4.6484;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:11:5.90:43,6,0	0/0:12,0:12:33.11:0,33,425	0/0:8,0:8:18.06:0,18,232	0/1:7,0:7:5.39:5,0,172	1/1:8,1:28:56.98:521,57,0	1/1:0,0:11:21.01:187,21,0	1/1:2,0:6:15.01:133,15,0	1/1:8,38:46:99:1914,114,0	1/1:6,0:7:8.68:64,9,0	0/0:20,0:20:51.15:0,51,634	0/0:21,0:21:60.19:0,60,772	1/1:1,1:6:12.02:131,12,0	1/1:3,0:4:6:53,6,0	1/1:1,0:8:15:132,15,0	1/1:1,0:3:3:27,3,0	1/1:2,0:5:9:80,9,0	0/0:20,0:19:51.15:0,51,642	1/1:1,0:14:27.01:240,27,0	1/1:7,0:10:17.98:159,18,0	1/1:7,1:14:17.90:143,18,0	1/1:0,6:6:15.05:253,15,0	1/1:2,0:4:6:51,6,0	1/1:3,0:3:8.85:59,9,0	1/1:2,0:2:2.97:20,3,0	1/1:6,0:16:30.01:264,30,0	1/1:1,15:17:48.14:781,48,0	1/1:5,0:13:21.01:186,21,0	1/1:6,11:16:30.10:506,30,0
chr10	88884126	.	C	CCA	22553.93	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-13.645;DP=692;FS=5.511;HRun=0;HaplotypeScore=66.1123;InbreedingCoeff=0.9989;MQ=86.39;MQ0=0;MQRankSum=-4.464;QD=39.71;ReadPosRankSum=6.296;VQSLOD=6.7862;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,39:44:92.71:1710,93,0	0/0:9,0:9:24.08:0,24,327	0/0:27,0:27:69.19:0,69,889	0/0:20,0:20:44.35:0,44,571	1/1:0,16:17:42.14:730,42,0	1/1:4,17:21:45.15:792,45,0	1/1:3,26:29:63.22:1101,63,0	1/1:6,23:29:66.18:1051,66,0	1/1:1,20:22:51.17:897,51,0	0/0:24,0:24:66.19:0,66,834	0/0:12,0:12:33.08:0,33,418	1/1:1,28:29:60.20:1056,60,0	1/1:4,32:37:84.29:1475,84,0	1/1:2,19:22:54.18:943,54,0	1/1:2,30:32:78.27:1373,78,0	1/1:0,23:23:54.18:949,54,0	0/0:32,0:32:81.24:0,81,1074	1/1:0,26:26:54.19:950,54,0	1/1:5,23:28:72.16:1116,72,0	1/1:2,20:22:57.20:1003,57,0	1/1:2,42:45:99:1742,99,0	1/1:2,22:24:54.18:949,54,0	1/1:1,8:9:24.08:423,24,0	1/1:2,29:31:80.92:1422,81,0	1/1:1,12:14:27.09:473,27,0	1/1:0,18:18:54.18:920,54,0	1/1:2,22:25:45.63:792,46,0	1/1:0,21:21:39.13:687,39,0
chr10	88885997	.	GGTTT	G	13512.64	PASS	AB=0.802;AC=46;AF=0.821;AN=56;BaseQRankSum=3.388;DP=729;FS=7.216;HRun=0;HaplotypeScore=145.3057;InbreedingCoeff=0.6601;MQ=66.94;MQ0=5;MQRankSum=2.340;QD=21.76;ReadPosRankSum=3.844;VQSLOD=4.3622;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,15:25:28.14:471,28,0	0/1:11,1:12:20.41:20,0,542	0/0:29,0:27:15.05:0,15,358	0/0:22,0:21:24.07:0,24,422	1/1:13,22:35:63.17:970,63,0	1/1:9,11:20:30.10:475,30,0	1/1:13,8:21:21.07:332,21,0	1/1:18,0:27:9:80,9,0	1/1:4,17:21:48.16:760,48,0	1/1:15,27:40:75.24:1165,75,0	1/1:5,12:17:30.05:446,30,0	1/1:19,17:36:48.16:760,48,0	1/1:14,18:32:51.17:807,51,0	1/1:4,13:17:30.10:475,30,0	1/1:11,17:29:45.15:693,45,0	1/1:9,14:24:42.14:645,42,0	0/0:24,1:25:0.83:0,1,993	0/1:8,7:15:30.98:329,0,31	1/1:21,8:28:27.08:406,27,0	1/1:16,23:39:68.90:1017,69,0	1/1:16,0:24:14.96:120,15,0	1/1:8,20:28:51.12:779,51,0	1/1:11,20:30:50.08:780,50,0	1/1:4,18:21:39.13:617,39,0	0/0:9,0:30:54.18:0,54,961	1/1:13,1:33:50.86:474,51,0	1/1:13,18:31:51.17:807,51,0	1/1:6,0:9:9.01:84,9,0
chr10	88886309	.	AT	A	3900.78	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=19.123;DP=667;FS=0.656;HRun=2;HaplotypeScore=139.0871;InbreedingCoeff=0.9994;MQ=89.63;MQ0=1;MQRankSum=-18.514;QD=16.25;ReadPosRankSum=4.095;VQSLOD=3.9451;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,21:27:50.30:354,50,0	0/0:11,0:11:33.11:0,33,494	0/0:31,0:31:93.31:0,93,1367	0/0:30,0:30:75.23:0,75,1093	0/0:26,0:26:78.26:0,78,1166	0/0:23,0:23:69.22:0,69,1013	0/0:17,0:17:51.16:0,51,743	0/0:45,0:45:99:0,135,1950	1/1:2,23:25:66.49:476,66,0	0/0:32,0:32:90.30:0,90,1347	0/0:20,0:20:60.19:0,60,877	0/0:23,0:23:69.22:0,69,1013	1/1:8,10:18:29.01:197,29,0	0/0:26,0:26:75.24:0,75,1101	1/1:2,26:28:66.34:524,66,0	1/1:4,21:25:65.21:459,65,0	0/0:24,0:24:69.21:0,69,1007	0/0:13,0:13:39:0,39,555	1/1:3,13:16:41.83:329,42,0	1/1:1,15:16:41.17:282,41,0	0/0:42,0:42:99:0,126,1865	0/0:24,0:24:66.21:0,66,960	1/1:0,19:19:50.20:345,50,0	1/1:9,9:18:23.05:153,23,0	1/1:4,11:15:32.82:239,33,0	0/0:29,0:29:81.27:0,81,1193	1/1:6,26:32:75.09:543,75,0	0/0:11,0:11:33.11:0,33,491
chr10	88886310	.	TTACCCTA	T	14708.92	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=18.819;DP=636;FS=1.397;HRun=0;HaplotypeScore=170.7166;InbreedingCoeff=0.9992;MQ=89.71;MQ0=1;MQRankSum=-18.788;QD=69.06;ReadPosRankSum=4.620;VQSLOD=5.1991;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:51.17:1318,51,0	0/0:11,0:11:33.11:0,33,1383	0/0:31,0:31:93.32:0,93,3577	0/0:26,0:26:78.27:0,78,2829	0/0:27,0:27:81.28:0,81,3254	0/0:23,0:23:69.22:0,69,2735	0/0:17,0:17:51.16:0,51,1993	0/0:46,0:46:99:0,138,5635	1/1:24,0:24:69.20:1768,69,0	0/0:32,0:32:96.33:0,96,3858	0/0:20,0:20:60.21:0,60,2446	0/0:25,0:25:72.25:0,72,2998	1/1:10,4:14:30.08:750,30,0	0/0:25,0:25:75.24:0,75,2925	1/1:27,0:27:78.27:2077,78,0	1/1:21,0:24:66.23:1768,66,0	0/0:23,0:23:69.21:0,69,2667	0/0:13,0:13:39.13:0,39,1542	1/1:14,0:14:38.93:1046,39,0	1/1:16,0:16:42.14:1124,42,0	0/0:42,0:42:99:0,126,5066	0/0:23,0:23:66.22:0,66,2593	1/1:19,0:19:51.18:1356,51,0	1/1:11,3:14:20.97:567,21,0	1/1:11,0:11:33.11:886,33,0	0/0:28,0:28:84.29:0,84,3381	1/1:27,0:27:78.27:2048,78,0	0/0:11,0:11:33.11:0,33,1275
chr10	88886312	.	ACCCTAG	A	10830.59	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=19.245;DP=628;FS=1.013;HRun=0;HaplotypeScore=169.1998;InbreedingCoeff=0.9992;MQ=88.45;MQ0=1;MQRankSum=-18.828;QD=52.07;ReadPosRankSum=4.539;VQSLOD=4.5878;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:50.66:959,51,0	0/0:11,0:11:33.11:0,33,1228	0/0:29,0:29:87.30:0,87,3047	0/0:25,0:25:75.26:0,75,2516	0/0:28,0:28:81.28:0,81,2964	0/0:22,0:22:66.21:0,66,2396	0/0:17,0:17:51.18:0,51,1807	0/0:48,0:48:99:0,144,5141	1/1:1,23:24:69.24:1352,69,0	0/0:35,0:35:99:0,102,3689	0/0:20,0:20:60.19:0,60,2152	0/0:26,0:26:75.26:0,75,2794	1/1:5,9:14:28.91:517,29,0	0/0:24,0:24:72.25:0,72,2646	1/1:1,26:27:78.27:1524,78,0	1/1:2,21:23:66.23:1322,66,0	0/0:21,0:21:63.22:0,63,2304	0/0:13,0:13:39.09:0,39,1376	1/1:0,13:13:39.13:795,39,0	1/1:0,15:16:42.14:811,42,0	0/0:42,0:42:99:0,126,4486	0/0:21,0:21:63.21:0,63,2292	1/1:0,19:19:51.17:986,51,0	1/1:3,9:12:21.07:388,21,0	1/1:0,11:11:33.11:656,33,0	0/0:28,0:28:84.28:0,84,2969	1/1:1,26:27:78.27:1519,78,0	0/0:10,0:10:30.10:0,30,1088
chr10	88886317	.	AG	A	4720.71	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=19.007;DP=628;FS=2.236;HRun=1;HaplotypeScore=130.7150;InbreedingCoeff=0.9986;MQ=88.48;MQ0=0;MQRankSum=-17.863;QD=21.96;ReadPosRankSum=3.543;VQSLOD=5.1643;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:53.93:453,54,0	0/0:12,0:12:36.11:0,36,552	0/0:26,0:26:78.25:0,78,1187	0/0:28,0:28:81.09:0,81,1142	0/0:28,0:28:84.27:0,84,1312	0/0:21,0:21:63.21:0,63,1005	0/0:18,0:18:54.17:0,54,833	0/0:47,0:47:99:0,138,2195	1/1:27,0:27:77.94:673,78,0	0/0:34,0:34:99:0,102,1580	0/0:19,0:19:57.18:0,57,887	0/0:26,0:26:75.26:0,75,1196	1/1:13,0:13:24.85:198,25,0	0/0:24,0:24:72.23:0,72,1126	1/1:27,0:27:77.11:617,77,0	1/1:22,0:22:62.94:535,63,0	0/0:20,0:20:60.20:0,60,956	0/0:13,0:13:39.06:0,39,593	1/1:13,4:17:51:475,51,0	1/1:16,0:16:41.50:323,42,0	0/0:40,0:40:99:0,120,1907	0/0:22,0:22:60.20:0,60,956	1/1:19,0:19:50.56:394,51,0	1/1:13,0:13:19.19:144,19,0	1/1:11,0:11:32.96:273,33,0	0/0:26,0:26:78.26:0,78,1225	1/1:27,0:27:77.59:637,78,0	0/0:9,0:9:27.09:0,27,431
chr10	88886732	.	T	TA	2321.40	PASS	AB=0.688;AC=15;AF=0.268;AN=56;BaseQRankSum=-7.049;DP=428;FS=0.000;HRun=11;HaplotypeScore=54.9307;InbreedingCoeff=0.8620;MQ=63.20;MQ0=0;MQRankSum=0.986;QD=18.28;ReadPosRankSum=2.103;VQSLOD=4.6265;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:35.82:0,36,278	0/0:5,0:5:11.93:0,12,93	0/0:12,0:9:13.48:0,13,71	0/0:6,0:5:14.70:0,15,105	0/0:34,1:36:64.23:0,64,670	0/0:8,0:8:20.92:0,21,163	0/0:5,0:6:13.97:0,14,98	0/0:5,0:31:51.23:0,51,153	0/0:11,0:12:25.77:0,26,174	0/0:10,0:10:26.89:0,27,208	0/0:28,0:28:64.75:0,65,493	0/0:9,0:9:23.89:0,24,186	1/1:0,13:13:30.05:300,30,0	0/0:5,0:6:13.99:0,14,99	1/1:1,12:13:9.71:281,10,0	1/1:2,13:15:33.07:335,33,0	0/0:34,0:35:82.66:0,83,623	0/0:22,0:22:47.77:0,48,371	0/1:6,5:11:22.01:152,0,22	1/1:3,22:25:33.74:490,34,0	0/0:1,0:6:10.18:0,10,29	0/0:3,0:3:8.97:0,9,70	1/1:3,13:16:29.98:291,30,0	1/1:2,8:9:24.05:243,24,0	0/0:13,0:14:34.87:0,35,258	0/0:6,0:20:24.35:0,24,72	1/1:5,18:24:42.08:426,42,0	0/0:0,0:11:22.41:0,22,65
chr10	88888153	.	TA	T	6023.12	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=9.118;DP=463;FS=6.711;HRun=12;HaplotypeScore=88.9259;InbreedingCoeff=0.8957;MQ=73.34;MQ0=1;MQRankSum=-8.008;QD=16.46;ReadPosRankSum=1.508;VQSLOD=5.7103;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,11:19:39.87:286,40,0	0/0:12,0:12:33.07:0,33,335	0/1:20,0:18:4.99:5,0,70	0/0:11,0:9:11.66:0,12,64	1/1:3,19:22:53.75:412,54,0	1/1:3,14:17:40.40:305,40,0	1/1:5,11:16:38.82:297,39,0	1/1:7,12:19:38.79:300,39,0	1/1:2,17:19:41.83:325,42,0	0/0:23,1:25:45.69:0,46,613	0/0:23,1:24:42.71:0,43,588	1/1:6,8:15:25.89:192,26,0	1/1:2,18:20:53.59:416,54,0	1/1:2,8:10:23.89:184,24,0	1/1:6,9:15:26.86:209,27,0	1/1:2,12:14:35.85:277,36,0	0/0:25,0:25:63.13:0,63,640	1/1:3,8:11:20.86:160,21,0	1/1:3,11:14:32.83:255,33,0	1/1:4,10:14:35.82:274,36,0	1/1:3,12:15:29.87:231,30,0	1/1:6,15:22:49.81:375,50,0	1/1:5,10:15:32.87:255,33,0	1/1:3,4:7:14.29:101,14,0	1/1:1,12:13:35.84:279,36,0	1/1:3,12:16:40.88:306,41,0	1/1:7,18:25:62.74:485,63,0	1/1:2,4:6:11.93:93,12,0
chr10	88888178	.	A	AGG	5486.60	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=6.990;DP=473;FS=8.605;HRun=7;HaplotypeScore=103.3220;InbreedingCoeff=0.9517;MQ=72.69;MQ0=1;MQRankSum=-8.597;QD=18.29;ReadPosRankSum=-1.339;VQSLOD=2.1006;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:39.10:0,39,454	0/0:15,0:15:39.08:0,39,440	0/0:14,0:12:17.03:0,17,256	0/0:13,0:12:33.09:0,33,379	1/1:2,0:26:52.70:203,53,0	1/1:5,0:14:22.46:79,22,0	1/1:5,0:18:3.33:93,3,0	1/1:5,0:20:44.39:210,44,0	0/0:20,0:20:45.11:0,45,516	0/0:33,0:33:93.27:0,93,1080	0/0:22,0:22:57.08:0,57,645	1/1:3,0:13:32.50:143,33,0	1/1:2,17:19:51.17:835,51,0	1/1:1,0:12:28.02:109,28,0	1/1:2,8:10:30.09:447,30,0	1/1:3,13:15:33.11:540,33,0	0/0:20,0:20:51.14:0,51,594	1/1:3,0:11:14.97:53,15,0	1/1:3,7:10:21.07:343,21,0	1/1:5,16:23:44.57:693,45,0	1/1:3,0:18:36.29:155,36,0	1/1:0,0:14:32.04:112,32,0	1/1:3,10:13:20.72:319,21,0	1/1:4,3:7:8.99:108,9,0	0/0:18,0:18:48.12:0,48,547	1/1:4,0:23:30.17:187,30,0	1/1:5,20:26:54.11:822,54,0	1/1:2,0:7:9.98:35,10,0
chr10	88888319	.	TA	T	5117.05	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=10.837;DP=519;FS=15.420;HRun=9;HaplotypeScore=52.4507;InbreedingCoeff=0.9971;MQ=70.88;MQ0=0;MQRankSum=-2.244;QD=24.25;ReadPosRankSum=3.463;VQSLOD=4.1392;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:65.87:584,66,0	0/0:18,0:18:51.14:0,51,579	0/0:8,0:8:21.05:0,21,228	0/0:10,0:10:21.03:0,21,220	0/0:28,0:28:69.19:0,69,787	0/0:21,1:22:26.70:0,27,551	0/0:16,0:16:45.12:0,45,508	0/0:30,0:30:75.21:0,75,857	1/1:0,21:22:59.07:528,59,0	0/0:30,0:30:78.23:0,78,901	0/0:20,0:20:54.15:0,54,615	0/0:18,0:18:45.07:0,45,481	1/1:1,14:15:42.02:384,42,0	0/0:16,0:16:45.09:0,45,504	1/1:0,16:16:39.02:357,39,0	1/1:1,16:17:45.02:412,45,0	0/0:22,0:22:63.16:0,63,707	0/0:11,0:11:21.02:0,21,228	1/1:0,12:12:33.01:302,33,0	1/1:0,29:30:89.05:795,89,0	0/0:10,0:10:24.06:0,24,266	0/0:14,0:14:36.08:0,36,397	1/1:3,17:20:48.02:439,48,0	1/1:0,12:12:33.02:302,33,0	1/1:2,18:20:54.03:494,54,0	0/0:27,0:27:72.19:0,72,814	1/1:3,20:23:57.03:521,57,0	0/0:8,0:8:21.06:0,21,242
chr10	88889606	.	G	GA	15696.47	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-2.570;DP=734;FS=3.133;HRun=4;HaplotypeScore=78.4036;InbreedingCoeff=0.9997;MQ=83.97;MQ0=0;MQRankSum=-3.429;QD=37.55;ReadPosRankSum=1.142;VQSLOD=4.8837;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,44:45:99:1723,126,0	0/0:8,0:8:24.07:0,24,272	0/0:21,0:21:54.13:0,54,591	0/0:21,0:21:45.76:0,46,549	0/0:28,0:28:75.18:0,75,831	0/0:34,0:34:96.26:0,96,1080	0/0:18,0:18:51.14:0,51,578	1/1:4,28:32:84.28:1149,84,0	1/1:0,28:28:81.27:1108,81,0	0/0:41,0:41:99:0,114,1293	0/0:25,0:25:75.20:0,75,841	0/0:26,0:26:78.21:0,78,874	1/1:1,23:24:66.22:903,66,0	0/0:31,0:31:87.25:0,87,987	1/1:3,24:27:72.24:985,72,0	1/1:0,20:20:57.19:780,57,0	0/0:22,0:22:60.17:0,60,681	0/0:14,0:14:39.09:0,39,432	1/1:1,19:20:57.19:780,57,0	1/1:2,31:33:87.25:1170,87,0	1/1:5,30:35:81.27:1108,81,0	0/0:27,0:27:72.19:0,72,808	1/1:2,25:27:78.25:1056,78,0	1/1:1,20:21:60.20:821,60,0	1/1:1,28:28:81.27:1108,81,0	1/1:2,24:26:75.23:1003,75,0	1/1:1,30:31:87.29:1190,87,0	1/1:1,19:20:60.20:812,60,0
chr10	88891747	.	GTGA	G	3637.27	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=3.817;DP=825;FS=1.748;HRun=0;HaplotypeScore=154.3662;InbreedingCoeff=0.4607;MQ=63.92;MQ0=26;MQRankSum=-1.160;QD=7.86;ReadPosRankSum=1.324;VQSLOD=3.3913;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:51,0:49:34.50:270,0,34	0/0:12,0:10:15:0,15,224	0/0:28,0:17:5.04:0,5,34	0/1:28,0:23:0.66:1,0,39	1/1:13,5:18:17.83:159,18,0	1/1:25,4:29:43.82:401,44,0	1/1:35,0:30:6.02:65,6,0	0/0:37,0:31:49.50:0,50,404	0/1:39,0:39:99:110,0,162	0/0:41,0:40:75.06:0,75,1103	0/0:19,0:19:36.04:0,36,509	1/1:31,15:45:72.11:791,72,0	0/0:28,0:27:45.91:0,46,694	1/1:29,7:36:63.07:669,63,0	0/0:31,0:31:32.96:0,33,386	0/0:31,0:31:61.79:0,62,980	0/0:28,0:28:54.14:0,54,956	1/1:18,6:24:11.96:358,12,0	0/0:26,0:22:27.86:0,28,315	0/0:10,0:10:12.04:0,12,237	0/1:74,0:68:99:212,0,266	1/1:25,5:29:25.83:360,26,0	0/0:21,0:20:26.84:0,27,418	0/0:24,0:24:29.15:0,29,424	0/1:18,0:18:10.50:87,0,10	0/1:18,0:16:99:126,0,113	0/0:26,0:25:40.86:0,41,463	0/1:17,0:17:15.07:30,0,15
chr10	88891771	.	ATGATGG	A	5396.74	PASS	AB=0.993;AC=23;AF=0.411;AN=56;BaseQRankSum=-1.056;DP=798;FS=5.259;HRun=0;HaplotypeScore=200.7701;InbreedingCoeff=-0.0491;MQ=48.16;MQ0=54;MQRankSum=-1.432;QD=8.85;ReadPosRankSum=-2.837;VQSLOD=2.7811;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:47,0:45:99:176,0,502	0/0:12,0:10:23.99:0,24,443	0/0:10,0:3:5.68:0,6,39	0/1:9,0:5:0.66:1,0,39	0/1:20,0:20:3.73:205,0,4	1/1:19,5:23:47.20:740,47,0	1/1:22,19:34:9.17:134,9,0	0/1:36,0:27:52.08:52,0,370	0/1:41,0:38:34.76:35,0,675	0/0:43,0:36:93.50:0,94,1828	0/0:17,0:16:38.69:0,39,786	1/1:47,4:49:65.47:1370,65,0	0/1:29,0:28:43.06:43,0,773	0/1:41,3:42:12.30:978,0,12	0/0:27,0:26:35.99:0,36,513	0/1:29,0:29:28.22:28,0,1142	0/0:25,0:25:75.14:0,75,1832	0/1:21,1:22:37.04:571,0,37	0/1:25,0:20:13.82:14,0,374	0/1:12,0:11:0.12:0,0,280	0/1:80,0:69:99:196,0,646	1/1:22,3:24:24.67:566,25,0	0/0:19,0:18:13.67:0,14,526	0/0:20,0:20:19.42:0,19,546	0/1:18,0:17:62.10:62,0,246	0/1:29,0:24:99:163,0,297	0/1:28,0:26:63.31:63,0,487	0/0:15,0:15:8.77:0,9,55
chr10	88891774	.	ATGG	A	3721.73	PASS	AB=1.000;AC=26;AF=0.500;AN=52;BaseQRankSum=1.369;DP=795;FS=1.830;HRun=0;HaplotypeScore=179.1211;InbreedingCoeff=0.4339;MQ=46.95;MQ0=58;MQRankSum=-2.900;QD=7.30;ReadPosRankSum=-0.021;VQSLOD=3.2773;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:46:58.73:0,59,476	0/0:12,0:10:18.02:0,18,261	./.	./.	1/1:21,0:21:1.13:47,1,0	1/1:28,0:24:26.57:223,27,0	1/1:40,0:33:8.12:58,8,0	1/1:36,0:27:32.64:221,33,0	0/0:42,0:39:56.81:0,57,627	0/0:42,0:34:69.01:0,69,1017	0/0:18,0:17:23.77:0,24,367	1/1:52,0:50:50.81:488,51,0	0/1:29,0:28:48.55:49,0,294	1/1:43,0:41:1.74:296,2,0	0/0:27,0:26:17.94:0,18,169	0/1:31,0:31:39.46:39,0,451	0/0:27,0:27:72.11:0,72,1081	0/1:23,0:23:21.64:182,0,22	0/1:27,0:21:31.06:31,0,129	0/1:12,0:11:0.60:1,0,122	1/1:74,4:67:99:1216,114,0	1/1:24,0:23:19.83:155,20,0	0/0:19,0:18:4.85:0,5,181	0/0:20,0:20:4.17:0,4,170	0/0:17,0:16:29.22:0,29,228	1/1:25,3:23:10.95:548,11,0	0/1:27,0:25:81.82:82,0,134	1/1:2,9:11:6.02:88,6,0
chr10	88891789	.	GTGATGA	G	2766.25	PASS	AB=0.860;AC=13;AF=0.241;AN=54;BaseQRankSum=9.348;DP=729;FS=15.546;HRun=0;HaplotypeScore=195.8197;InbreedingCoeff=-0.3415;MQ=45.56;MQ0=55;MQRankSum=-9.802;QD=7.75;ReadPosRankSum=0.523;VQSLOD=1.6239;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:40:26.93:0,27,419	0/0:11,0:10:24.08:0,24,698	./.	0/0:5,0:2:0.69:0,1,44	0/0:20,0:19:6.39:0,6,35	0/1:26,0:21:99:166,0,155	0/1:40,1:34:37.64:48,0,38	0/0:34,0:26:67.68:0,68,922	0/0:39,0:36:44.91:0,45,636	0/0:36,0:27:75.22:0,75,1939	0/0:13,0:12:27.08:0,27,625	0/1:57,0:54:36.07:257,0,36	0/1:17,15:30:99:470,0,657	0/1:38,0:36:80.18:114,0,80	0/0:23,0:22:11.97:0,12,204	0/1:19,15:34:99:442,0,986	0/0:25,0:25:72.25:0,72,2233	0/1:22,0:22:79.89:80,0,228	0/1:15,8:19:99:270,0,311	0/1:6,7:12:99:150,0,294	0/0:64,0:58:99:0,118,1695	0/1:14,0:14:24.80:74,0,25	0/1:11,3:14:42.83:43,0,326	0/1:18,0:18:50.44:50,0,208	0/0:16,0:15:13.34:0,13,204	0/0:28,0:23:66.42:0,66,762	0/1:9,16:23:99:752,0,198	0/0:14,0:14:21.07:0,21,401
chr10	88891795	.	A	ATGGTGG	4348.53	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=9.863;DP=726;FS=2.219;HRun=0;HaplotypeScore=186.4089;InbreedingCoeff=0.7158;MQ=45.61;MQ0=52;MQRankSum=-9.887;QD=8.95;ReadPosRankSum=-0.943;VQSLOD=4.0700;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,25:42:34.86:929,35,0	0/0:12,0:11:27.08:0,27,508	0/0:4,0:3:2.19:0,2,94	0/0:7,0:3:0.17:0,0,41	0/1:15,0:19:0.18:0,0,3	1/1:19,0:22:8.77:42,9,0	1/1:40,0:34:3.88:22,4,0	0/0:33,0:29:54.16:0,54,894	1/1:11,22:33:21.07:689,21,0	0/0:40,0:30:51.08:0,51,914	0/0:13,0:12:15.04:0,15,267	1/1:56,0:54:5.98:240,6,0	1/1:27,0:26:20.22:449,20,0	1/1:40,0:38:5.12:165,5,0	1/1:6,0:25:0.89:2,1,0	1/1:32,0:32:48.05:542,48,0	0/0:26,0:26:63.14:0,63,1190	0/1:13,0:23:4.64:5,0,80	1/1:20,0:18:18.39:149,18,0	1/1:13,0:12:8.42:75,8,0	0/0:62,0:56:99:0,105,2039	1/1:12,0:12:9.36:69,9,0	1/1:13,0:13:6.75:63,7,0	1/1:5,1:20:6.02:73,6,0	1/1:4,9:12:17.98:391,18,0	0/0:27,0:22:41.95:0,42,722	1/1:22,0:20:34.72:443,35,0	0/0:16,0:16:27.09:0,27,516
chr10	88891810	.	G	GTGATGATGATGA	4026	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=8.553;DP=722;FS=0.487;HRun=0;HaplotypeScore=231.2860;InbreedingCoeff=0.2236;MQ=50.63;MQ0=32;MQRankSum=-10.359;QD=9.28;ReadPosRankSum=4.957;VQSLOD=1.9400;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:40:31.75:32,0,617	0/0:15,0:15:36.12:0,36,1004	0/0:16,0:14:33.10:0,33,852	0/0:14,0:10:23.06:0,23,487	1/1:18,0:17:2.66:36,3,0	1/1:24,0:21:15.04:394,15,0	1/1:44,0:37:35.98:768,36,0	0/0:37,0:35:66.14:0,66,1734	0/1:31,0:30:79.74:80,0,315	0/0:34,0:27:40.19:0,40,1713	0/0:9,0:9:18.02:0,18,469	1/1:15,36:59:15.05:854,15,0	0/1:30,0:28:99:201,0,293	1/1:11,24:46:9.50:393,10,0	0/0:25,0:24:14.72:0,15,303	0/1:34,0:34:99:182,0,300	0/0:28,0:28:69.12:0,69,1921	0/1:23,0:23:91.15:424,0,91	0/1:14,0:12:40.07:40,0,66	0/1:10,0:10:14.33:14,0,282	0/0:53,0:51:99:0,113,3707	1/1:3,9:15:6.02:246,6,0	0/0:10,0:10:8.71:0,9,158	0/1:18,0:18:21.08:21,0,195	0/0:14,0:13:3.93:0,4,104	0/0:19,0:17:33.07:0,33,1006	0/1:23,0:22:99:342,0,294	0/0:14,0:14:30.10:0,30,1055
chr10	88892609	.	CTG	C	865.09	PASS	AB=1.000;AC=26;AF=0.500;AN=52;BaseQRankSum=-3.751;DP=463;FS=0.000;HRun=0;HaplotypeScore=85.8375;InbreedingCoeff=0.6963;MQ=42.19;MQ0=43;MQRankSum=4.589;QD=3.93;ReadPosRankSum=0.677;VQSLOD=2.1767;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:23:2.99:0,3,24	1/1:7,0:6:2.99:24,3,0	./.	./.	1/1:17,0:16:8.93:63,9,0	1/1:19,0:18:0.91:96,1,0	1/1:15,0:10:8.63:54,9,0	0/0:26,0:23:12.68:0,13,76	0/1:15,0:12:0.33:0,0,0	1/1:9,7:14:17.79:134,18,0	1/1:17,0:17:8.96:69,9,0	1/1:16,1:17:5.94:41,6,0	0/0:14,0:14:13.45:0,13,92	1/1:16,0:15:14.89:108,15,0	0/0:21,0:21:8.93:0,9,66	0/0:15,0:14:14.97:0,15,121	1/1:25,0:24:8.74:136,9,0	1/1:4,0:6:2.94:18,3,0	0/0:8,0:7:11.93:0,12,93	0/0:14,0:12:8.97:0,9,71	0/0:30,0:28:29.89:0,30,247	1/1:15,1:16:14.75:97,15,0	0/0:20,0:19:18.35:0,18,133	0/0:26,0:22:20.95:0,21,167	1/1:21,0:17:29.65:201,30,0	0/0:24,0:22:26.34:0,26,187	0/0:18,0:16:17.62:0,18,138	0/1:12,0:8:11.98:12,0,27
chr10	88892691	.	GCCTGGT	G	369.14	PASS	AC=8;AF=0.160;AN=50;BaseQRankSum=3.938;DP=453;FS=2.523;HRun=0;HaplotypeScore=119.1878;InbreedingCoeff=0.9013;MQ=83.70;MQ0=0;MQRankSum=-3.005;QD=18.46;ReadPosRankSum=-1.252;VQSLOD=3.1396;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.22:0,78,2694	0/0:9,0:9:27.09:0,27,1013	0/0:19,0:19:57.07:0,57,1743	0/0:21,0:21:49.92:0,50,1823	./.	./.	1/1:2,1:3:9:121,9,0	0/0:25,0:25:75.25:0,75,2575	0/0:13,0:13:39.13:0,39,1307	0/0:15,0:15:45.14:0,45,1605	0/0:10,0:10:30.10:0,30,1050	1/1:0,2:2:3.01:72,3,0	0/0:21,0:21:63.20:0,63,2220	1/1:2,6:8:12.01:189,12,0	0/0:22,0:22:66.23:0,66,2483	0/0:16,0:16:48.15:0,48,1611	0/0:21,0:21:63.21:0,63,2104	./.	0/0:11,0:11:33.09:0,33,977	0/0:20,0:20:60.19:0,60,2146	0/0:49,0:49:99:0,144,5169	1/1:3,4:7:9.01:123,9,0	0/0:24,0:24:72.23:0,72,2622	0/0:24,0:24:69.22:0,69,2429	0/0:25,0:25:75.26:0,75,2766	0/0:21,0:21:63.20:0,63,2195	0/0:19,0:19:57.20:0,57,2129	0/0:9,0:9:27.09:0,27,1016
chr10	88892700	.	CTGCAGAGGAACAAAGATGGCATTGAACTCACTGG	C	1363.99	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=4.537;DP=469;FS=3.390;HRun=0;HaplotypeScore=391.1928;InbreedingCoeff=0.7725;MQ=92.42;MQ0=0;MQRankSum=-4.469;QD=85.25;ReadPosRankSum=0.792;VQSLOD=1.5815;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:93.32:0,93,12862	0/0:10,0:10:30.10:0,30,4495	0/0:22,0:22:65.81:0,66,4923	0/0:24,0:25:72.24:0,72,4862	./.	1/1:0,2:2:2.97:20,3,0	1/1:0,1:1:3.01:267,3,0	0/0:25,0:25:72.25:0,72,5716	0/0:14,0:14:42.14:0,42,6256	0/0:18,0:18:54.17:0,54,7372	0/0:10,0:10:30.10:0,30,4662	1/1:0,2:2:3.01:268,3,0	0/0:20,0:20:57.20:0,57,8233	1/1:0,6:6:6.02:532,6,0	0/0:26,0:26:78.27:0,78,11055	0/0:16,0:16:48.16:0,48,7281	0/0:21,0:21:60.16:0,60,6660	1/1:0,1:1:3.01:150,3,0	0/0:11,0:11:33.10:0,33,3296	0/0:20,0:20:60.21:0,60,8718	0/0:53,0:53:99:0,160,20781	1/1:0,4:4:3.01:267,3,0	0/0:25,0:25:75.26:0,75,11505	0/0:23,0:23:66.23:0,66,8139	0/0:26,0:26:78.27:0,78,10452	0/0:20,0:20:60.19:0,60,7734	0/0:21,0:21:63.18:0,63,8472	0/0:9,0:9:27.09:0,27,4290
chr10	88893990	.	ATCTGCCCAGC	A	26967.39	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=19.384;DP=639;FS=21.946;HRun=0;HaplotypeScore=258.5595;InbreedingCoeff=0.9967;MQ=55.17;MQ0=0;MQRankSum=-19.646;QD=77.49;ReadPosRankSum=4.742;VQSLOD=3.3053;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,141,7140	0/0:14,0:14:42.12:0,42,1796	0/0:21,0:19:45.15:0,45,2035	0/0:18,0:16:42.12:0,42,1318	1/1:7,23:30:54.19:1799,54,0	1/1:2,16:18:45.15:1500,45,0	1/1:6,9:15:21.07:700,21,0	0/0:39,0:39:99:0,117,5594	0/0:22,0:22:66.23:0,66,3191	0/0:28,0:28:84.29:0,84,4302	0/0:23,0:23:69.22:0,69,3543	1/1:3,21:24:60.21:2000,60,0	1/1:4,14:18:36.59:1199,37,0	1/1:4,14:18:42.14:1399,42,0	1/1:1,19:20:54.19:1800,54,0	1/1:1,16:17:48.16:1600,48,0	0/0:27,0:27:78.27:0,78,4106	1/1:1,8:9:24.08:800,24,0	1/1:8,22:30:60.17:1874,60,0	1/1:0,29:29:69.24:2300,69,0	0/0:20,0:20:60.21:0,60,3134	1/1:0,29:29:75.26:2500,75,0	1/1:4,26:30:72.72:2400,73,0	1/1:2,9:11:24.55:801,25,0	1/1:2,21:23:60.21:2000,60,0	0/0:24,0:24:72.25:0,72,3797	1/1:3,24:27:69.24:2296,69,0	0/0:5,0:5:15.05:0,15,719
chr10	88895413	.	CA	C	2759.78	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.972;DP=806;FS=11.213;HRun=3;HaplotypeScore=90.0071;InbreedingCoeff=0.9981;MQ=86.75;MQ0=0;MQRankSum=1.312;QD=30.00;ReadPosRankSum=-0.982;VQSLOD=2.0880;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.29:0,96,1337	0/0:20,0:20:54.18:0,54,776	0/0:34,0:34:99:0,99,1353	0/0:25,0:25:68.92:0,69,890	0/0:46,0:46:99:0,129,1768	0/0:45,0:45:99:0,129,1750	0/0:24,0:24:69.21:0,69,974	1/1:1,29:30:87.22:1029,87,0	0/0:39,0:39:99:0,117,1666	0/0:36,0:36:99:0,108,1524	0/0:19,0:19:54.10:0,54,714	0/0:38,0:38:99:0,114,1606	0/0:32,0:32:90.30:0,90,1293	0/0:29,0:29:87.28:0,87,1234	0/0:35,0:35:99:0,99,1390	0/0:30,0:30:81.27:0,81,1166	0/0:28,0:28:84.27:0,84,1190	0/0:13,0:13:35.92:0,36,518	0/0:29,0:29:77.90:0,78,1069	0/0:22,0:22:63.21:0,63,905	1/1:0,31:31:72.23:893,72,0	0/0:21,0:21:63.17:0,63,883	0/0:34,0:34:84.23:0,84,1163	0/0:32,0:32:90.29:0,90,1277	0/0:18,0:17:51.13:0,51,710	1/1:1,22:23:23:738,23,0	0/0:32,0:32:96.31:0,96,1360	1/1:0,8:8:21.07:260,21,0
chr10	88895523	.	A	AG	15875.12	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-12.082;DP=748;FS=6.089;HRun=1;HaplotypeScore=85.1086;InbreedingCoeff=0.9981;MQ=77.37;MQ0=0;MQRankSum=-4.663;QD=39.10;ReadPosRankSum=2.193;VQSLOD=5.4811;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,117,1507	0/0:10,0:10:30.10:0,30,390	0/0:25,0:25:63.17:0,63,779	0/0:16,0:16:42.11:0,42,516	1/1:0,26:26:72.24:1078,72,0	1/1:1,26:27:72.24:1078,72,0	1/1:3,24:27:66.22:988,66,0	0/0:31,0:31:81.43:0,81,469	0/0:39,0:39:99:0,111,1438	0/0:34,0:34:93.27:0,93,1188	0/0:26,0:26:72.23:0,72,928	1/1:1,29:30:66.22:988,66,0	1/1:1,30:31:81.27:1212,81,0	1/1:2,18:20:51.17:762,51,0	1/1:0,33:33:87.29:1301,87,0	1/1:0,39:39:99:1526,102,0	0/0:25,0:25:75.24:0,75,973	1/1:1,22:23:60.20:899,60,0	1/1:2,21:23:63.20:921,63,0	1/1:0,28:28:84.28:1259,84,0	0/0:16,0:16:40.94:0,41,242	1/1:0,26:26:69.23:1032,69,0	1/1:0,22:22:57.19:854,57,0	1/1:0,22:22:60.20:898,60,0	0/0:32,0:32:92.77:0,93,1176	0/0:36,0:36:80.92:0,81,569	1/1:3,26:29:72.24:1078,72,0	0/0:8,0:8:15.94:0,16,93
chr10	88895874	.	A	AC	2010.75	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.343;DP=772;FS=28.799;HRun=3;HaplotypeScore=86.8903;InbreedingCoeff=0.9976;MQ=78.72;MQ0=0;MQRankSum=-0.537;QD=30.47;ReadPosRankSum=2.135;VQSLOD=1.7560;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:34:84.28:1175,84,0	0/0:10,0:10:30.02:0,30,328	0/0:28,0:28:74.41:0,74,837	0/0:28,0:28:60.16:0,60,690	0/0:25,0:25:65.94:0,66,716	0/0:19,0:19:51.11:0,51,584	0/0:27,0:27:72.16:0,72,816	0/0:35,0:35:90.23:0,90,1034	1/1:4,28:32:69.23:957,69,0	0/0:40,0:40:99:0,108,1286	0/0:20,0:20:57.06:0,57,641	0/0:24,0:24:69.16:0,69,798	0/0:32,0:32:90.25:0,90,1056	0/0:34,0:34:93.27:0,93,1103	0/0:24,0:24:72.09:0,72,814	0/0:24,0:24:69.21:0,69,826	0/0:36,0:36:99:0,105,1241	0/0:38,0:38:99:0,102,1183	0/0:22,0:22:63.18:0,63,746	0/0:24,0:24:72.19:0,72,830	0/0:45,0:45:99:0,123,1393	0/0:30,0:30:84.14:0,84,952	0/0:24,0:24:66.02:0,66,725	0/0:39,0:39:99:0,111,1297	0/0:35,0:35:99:0,99,1137	0/0:20,0:20:57.13:0,57,667	0/0:15,0:15:45.08:0,45,512	0/0:8,0:8:21.06:0,21,252
chr10	88896816	.	T	TGAC	24581.49	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-1.853;DP=677;FS=0.359;HRun=0;HaplotypeScore=136.2573;InbreedingCoeff=0.9990;MQ=82.45;MQ0=0;MQRankSum=-5.039;QD=47.55;ReadPosRankSum=2.511;VQSLOD=6.2845;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,45:49:99:2355,108,0	0/0:13,0:13:30.10:0,30,475	0/0:19,0:19:42.12:0,42,616	0/0:23,0:24:34.26:0,34,799	1/1:7,26:35:63.22:1372,63,0	1/1:3,18:23:45.15:983,45,0	1/1:3,18:21:48.16:1043,48,0	1/1:5,22:28:72.18:1495,72,0	1/1:2,23:26:63.04:1373,63,0	0/0:29,0:29:84.28:0,84,1313	0/0:27,0:27:75.24:0,75,1160	1/1:4,12:16:36.12:755,36,0	1/1:0,16:16:39.13:851,39,0	1/1:3,28:33:84.29:1821,84,0	1/1:6,18:25:48.16:1041,48,0	1/1:4,15:19:33.11:720,33,0	0/0:33,0:33:84.24:0,84,1280	1/1:2,25:28:66.23:1432,66,0	1/1:5,14:19:48.16:1011,48,0	1/1:5,15:20:39.13:852,39,0	1/1:1,24:25:57.20:1241,57,0	1/1:4,12:17:33.11:715,33,0	1/1:1,19:20:39.13:850,39,0	1/1:1,25:27:60.21:1311,60,0	0/0:15,0:15:36.11:0,36,545	1/1:5,21:27:21.64:1273,22,0	1/1:3,26:29:63.22:1374,63,0	1/1:1,11:12:33.11:714,33,0
chr10	88898874	.	ACTCTCTCTCT	A	341.94	PASS	AB=0.885;AC=7;AF=0.135;AN=52;BaseQRankSum=1.926;DP=594;FS=14.111;HRun=0;HaplotypeScore=209.4894;InbreedingCoeff=0.3216;MQ=68.73;MQ0=10;MQRankSum=-1.675;QD=6.00;ReadPosRankSum=1.227;VQSLOD=1.7609;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:18:9.03:0,9,325	0/0:5,0:5:1.55:0,2,4	0/0:23,0:15:2.37:0,2,8	0/0:37,0:22:0.47:0,0,1	0/0:33,0:33:18.06:0,18,557	0/0:35,0:35:12.94:0,13,314	0/0:21,0:21:15.05:0,15,511	./.	0/0:18,0:18:8.26:0,8,226	0/1:20,1:23:82.63:137,0,83	0/0:22,0:22:3:0,3,25	0/0:29,0:29:6.49:0,6,186	0/0:15,0:15:4.20:0,4,131	0/0:20,0:20:10.28:0,10,420	0/0:17,0:17:3.01:0,3,65	0/0:22,0:22:12.93:0,13,412	0/0:17,0:16:5.66:0,6,22	0/0:11,0:11:9.03:0,9,339	0/0:14,0:13:12.04:0,12,388	0/0:33,0:33:1.62:0,2,5	./.	0/0:29,0:29:2.32:0,2,46	0/0:22,0:22:3.01:0,3,90	0/0:21,0:21:3.01:0,3,68	1/1:15,0:16:3.01:53,3,0	1/1:11,2:13:5.12:175,5,0	0/0:23,0:23:21.06:0,21,543	1/1:4,1:5:3.01:89,3,0
chr10	88898919	.	CTCTCTCAT	C	418.58	PASS	AB=1.000;AC=12;AF=0.231;AN=52;BaseQRankSum=2.979;DP=354;FS=5.890;HRun=0;HaplotypeScore=119.9106;InbreedingCoeff=-0.0372;MQ=37.68;MQ0=22;MQRankSum=-1.197;QD=2.83;ReadPosRankSum=2.300;VQSLOD=1.6800;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:12:10.01:0,10,138	0/1:6,0:6:56.57:57,0,60	./.	./.	0/0:21,0:20:9.02:0,9,153	0/0:18,0:17:10.31:0,10,122	0/0:9,0:9:4.75:0,5,186	0/0:15,0:15:32.08:0,32,257	0/1:22,0:21:8.27:8,0,88	0/1:16,0:14:99:188,0,146	0/0:7,7:14:7.69:0,8,48	0/1:19,0:18:11.62:12,0,52	0/1:17,0:16:13.79:14,0,91	0/0:21,0:20:9.19:0,9,206	0/0:9,0:9:0.46:0,0,1	0/0:15,0:14:12.95:0,13,186	0/1:19,0:17:99:134,0,108	0/0:5,0:5:13.14:0,13,198	0/0:8,0:6:15.32:0,15,236	0/0:16,0:14:8.68:0,9,29	0/0:7,0:3:2.68:0,3,11	1/1:19,0:17:2.76:26,3,0	0/0:7,0:7:2.71:0,3,24	0/0:11,0:10:2.94:0,3,18	1/1:11,0:11:3.01:40,3,0	0/1:10,0:10:51.71:52,0,105	0/0:15,0:14:19.31:0,19,293	0/1:9,0:8:9.39:25,0,9
chr10	88898924	.	TCATACACACACA	T	623.42	PASS	AB=0.992;AC=15;AF=0.300;AN=50;BaseQRankSum=2.219;DP=375;FS=20.916;HRun=0;HaplotypeScore=138.4123;InbreedingCoeff=0.2280;MQ=38.66;MQ0=21;MQRankSum=-0.201;QD=3.58;ReadPosRankSum=0.589;VQSLOD=1.5105;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:14:17.54:18,0,60	0/0:7,0:7:13.32:0,13,716	./.	./.	1/1:19,0:19:2.78:21,3,0	0/1:20,0:19:3.88:113,0,4	0/1:12,0:12:16.62:17,0,17	0/0:19,0:19:46.45:0,46,1206	0/0:22,0:21:8.50:0,9,257	0/0:17,0:15:33.46:0,33,1018	0/0:14,0:14:9.03:0,9,414	1/1:18,2:19:14.37:377,14,0	0/1:19,0:18:7.56:8,0,810	1/1:15,2:18:5.91:111,6,0	0/0:11,0:11:12.04:0,12,474	0/1:14,0:13:6.52:7,0,352	0/0:22,0:20:23.06:0,23,1044	0/1:6,0:6:59.22:81,0,59	0/1:8,0:6:1.86:2,0,277	0/0:16,0:14:11.04:0,11,332	0/0:6,0:3:2.68:0,3,11	1/1:21,0:19:2.46:17,2,0	0/0:9,0:9:9.02:0,9,360	0/0:9,0:8:2.94:0,3,18	./.	0/0:13,0:13:38.49:0,38,1148	0/0:15,0:14:26.99:0,27,936	0/0:9,0:8:21:0,21,809
chr10	88898927	.	TACACACACACAC	T	584.26	PASS	AB=0.855;AC=11;AF=0.220;AN=50;BaseQRankSum=1.019;DP=371;FS=1.423;HRun=0;HaplotypeScore=138.3262;InbreedingCoeff=0.4950;MQ=39.42;MQ0=21;MQRankSum=-2.735;QD=5.67;ReadPosRankSum=0.453;VQSLOD=2.3357;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:13:2.56:3,0,76	0/0:7,0:7:15.05:0,15,809	./.	./.	0/1:12,6:18:0:0,0,0	1/1:13,5:18:2.60:102,3,0	1/1:6,6:12:2.68:11,3,0	0/0:20,0:20:36.12:0,36,1391	0/0:11,0:18:12.93:0,13,290	0/0:18,0:17:36.04:0,36,1337	0/0:14,0:14:9.03:0,9,464	1/1:10,8:17:11.62:394,12,0	0/0:20,0:19:22.49:0,22,977	1/1:9,2:14:3.01:104,3,0	0/0:11,0:11:12.04:0,12,572	0/0:14,0:13:9.03:0,9,415	0/0:22,0:19:27.09:0,27,1186	0/1:6,0:6:11.42:97,0,11	0/0:5,0:4:6.91:0,7,293	0/0:10,0:15:16.12:0,16,548	0/0:11,0:7:5.69:0,6,58	0/0:8,11:18:0.42:0,0,1	0/0:9,0:9:12.03:0,12,580	0/0:7,0:9:2.94:0,3,18	./.	0/0:15,0:15:36.12:0,36,1473	0/0:13,0:12:24.08:0,24,1043	0/0:12,0:10:24.08:0,24,1212
chr10	88900348	.	AAGAC	A	21385.32	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=14.044;DP=740;FS=0.000;HRun=0;HaplotypeScore=137.6395;InbreedingCoeff=0.9988;MQ=73.35;MQ0=1;MQRankSum=-4.965;QD=38.46;ReadPosRankSum=4.169;VQSLOD=5.1611;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,38:47:87.30:1493,87,0	0/0:8,0:8:24.08:0,24,604	0/0:27,0:26:49.70:0,50,1072	0/0:30,0:28:40.68:0,41,955	1/1:7,39:46:99:1862,114,0	1/1:3,13:16:36.12:618,36,0	1/1:2,18:20:37.46:795,37,0	1/1:10,23:33:69.19:1074,69,0	1/1:5,19:24:51.17:875,51,0	0/0:39,0:39:99:0,108,2631	0/0:26,0:26:63.17:0,63,1529	1/1:3,30:33:84.29:1442,84,0	1/1:5,24:29:75.26:1287,75,0	1/1:2,20:22:51.17:875,51,0	1/1:1,29:30:81.28:1376,81,0	1/1:1,18:19:39.13:669,39,0	0/0:31,0:31:78.23:0,78,1787	1/1:3,18:21:51.13:844,51,0	1/1:4,14:18:42.14:696,42,0	1/1:2,27:29:81.24:1318,81,0	1/1:3,10:13:21.07:360,21,0	1/1:4,22:26:54.18:898,54,0	1/1:5,24:29:60.20:1017,60,0	1/1:7,14:20:39.13:669,39,0	0/0:23,0:23:66.23:0,66,1644	1/1:2,26:28:53.22:1221,53,0	1/1:5,28:33:72.25:1222,72,0	1/1:2,17:19:45.15:772,45,0
chr10	88900438	.	G	GC	593.73	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.818;DP=632;FS=0.000;HRun=7;HaplotypeScore=74.8629;InbreedingCoeff=0.9983;MQ=75.19;MQ0=2;MQRankSum=0.342;QD=25.81;ReadPosRankSum=3.478;VQSLOD=4.2374;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:96.14:0,96,921	0/0:10,0:10:30.05:0,30,290	0/0:31,0:28:58.52:0,59,528	0/0:15,1:14:29.85:0,30,284	0/0:21,0:21:57.09:0,57,550	0/0:22,0:22:60.10:0,60,579	0/0:15,0:15:36.06:0,36,347	0/0:33,0:33:75.09:0,75,717	0/0:22,0:22:54.09:0,54,521	0/0:32,0:32:87.13:0,87,837	0/0:21,0:21:60.10:0,60,579	0/0:22,0:22:60.07:0,60,572	0/0:20,0:20:57.09:0,57,550	0/0:17,0:17:45.07:0,45,435	0/0:25,0:25:69.09:0,69,661	0/0:24,0:24:60.10:0,60,579	0/0:34,0:34:99:0,99,949	0/0:18,0:18:51.08:0,51,492	0/0:18,0:18:39.06:0,39,377	0/0:30,0:30:84.07:0,84,800	0/0:16,0:16:39.06:0,39,377	0/0:25,0:25:63.10:0,63,608	0/0:25,0:25:66.10:0,66,637	0/0:13,0:12:33.05:0,33,319	1/1:2,21:23:57.17:689,57,0	0/0:22,0:22:63.10:0,63,608	0/0:25,0:25:69.09:0,69,660	0/0:15,0:15:39.01:0,39,367
chr10	88900989	.	C	CA	1613.50	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=5.235;DP=421;FS=9.133;HRun=7;HaplotypeScore=95.8107;InbreedingCoeff=0.6797;MQ=69.81;MQ0=23;MQRankSum=-7.746;QD=7.14;ReadPosRankSum=-1.189;VQSLOD=0.2490;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:9.86:0,10,56	0/0:7,0:7:21.03:0,21,201	0/0:29,0:18:13.54:0,14,229	0/0:22,0:14:28.02:0,28,234	1/1:20,0:20:21.61:100,22,0	1/1:13,1:10:17.97:104,18,0	1/1:3,1:4:2.22:7,2,0	0/0:17,0:14:1.95:0,2,16	0/1:9,0:9:6.21:6,0,17	0/0:19,0:18:39.06:0,39,374	0/0:21,0:20:48.07:0,48,462	1/1:9,0:9:10.38:55,10,0	1/1:14,0:11:10.74:56,11,0	1/1:11,0:10:15.66:106,16,0	1/1:10,1:10:5.64:60,6,0	1/1:11,0:10:10.46:66,10,0	0/0:25,0:25:66.09:0,66,633	0/1:9,0:6:4.13:4,0,12	1/1:8,3:11:15.52:176,16,0	1/1:7,11:18:37.23:360,37,0	0/0:7,0:6:3.13:0,3,7	1/1:10,1:10:8.43:88,8,0	1/1:18,0:14:2.85:19,3,0	1/1:12,0:8:6.19:35,6,0	0/0:20,0:20:54.09:0,54,521	1/1:15,0:14:4.99:23,5,0	1/1:13,16:28:24.22:543,24,0	0/0:5,0:5:1.41:0,1,4
chr10	88900996	.	AG	A	2872.85	PASS	AB=0.837;AC=38;AF=0.679;AN=56;BaseQRankSum=7.923;DP=400;FS=8.781;HRun=1;HaplotypeScore=80.9969;InbreedingCoeff=0.6471;MQ=61.14;MQ0=47;MQRankSum=-8.357;QD=11.82;ReadPosRankSum=-1.122;VQSLOD=1.0167;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:13:3.84:82,0,4	0/0:10,0:8:19.89:0,20,277	0/0:24,0:13:12.41:0,12,232	0/0:22,0:13:25.44:0,25,268	1/1:5,14:17:38.18:292,38,0	1/1:5,7:7:19.01:127,19,0	1/1:3,1:2:2.97:20,3,0	1/1:7,6:10:14.12:203,14,0	0/1:5,1:5:1.95:34,0,2	0/0:19,0:16:43.06:0,43,527	0/0:23,0:21:51.03:0,51,653	1/1:6,2:8:15.73:95,16,0	1/1:3,9:9:19.89:135,20,0	1/1:6,5:9:20.77:152,21,0	1/1:5,4:7:17.69:115,18,0	1/1:4,5:7:20.79:151,21,0	0/0:32,0:29:75.82:0,76,914	0/1:6,4:7:33.55:65,0,34	1/1:7,2:9:6.54:129,7,0	1/1:11,5:15:38.69:286,39,0	1/1:4,5:5:12.04:155,12,0	1/1:4,6:8:8.02:128,8,0	1/1:4,10:10:27.70:201,28,0	0/1:10,4:8:6.87:69,0,7	0/0:27,0:23:56.42:0,56,740	1/1:3,7:9:6.56:146,7,0	1/1:21,5:25:43.41:368,43,0	1/1:1,4:4:9.03:116,9,0
chr10	88900999	.	AAG	A	2855.84	PASS	AB=0.989;AC=34;AF=0.607;AN=56;BaseQRankSum=8.589;DP=390;FS=11.383;HRun=0;HaplotypeScore=84.5191;InbreedingCoeff=0.3583;MQ=56.68;MQ0=53;MQRankSum=-7.578;QD=11.95;ReadPosRankSum=0.147;VQSLOD=2.5581;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:11:11.71:0,12,67	0/0:10,0:8:22.29:0,22,320	0/0:24,0:13:26.36:0,26,260	0/1:18,0:9:14.33:14,0,125	1/1:18,1:17:24.28:409,24,0	1/1:12,0:7:17.86:199,18,0	1/1:4,0:2:3.01:41,3,0	0/1:13,0:10:18.85:44,0,19	0/1:6,0:5:2.09:2,0,19	0/0:19,0:16:46.82:0,47,647	0/0:23,0:21:47.75:0,48,751	1/1:7,0:7:11.90:122,12,0	1/1:11,1:9:19.60:233,20,0	1/1:8,1:7:14.87:163,15,0	1/1:8,0:6:14.91:174,15,0	0/1:10,0:7:23.58:115,0,24	0/0:32,0:28:75.25:0,75,1187	0/1:11,0:7:48.68:49,0,69	1/1:6,2:8:4.14:83,4,0	1/1:12,4:15:38.59:292,39,0	1/1:8,1:5:6.43:17,6,0	0/1:9,1:8:19.25:224,0,19	1/1:14,0:10:27.08:354,27,0	0/1:12,0:6:42.44:112,0,42	0/0:28,0:23:66.08:0,66,1012	0/1:10,0:9:14.20:55,0,14	1/1:21,4:24:20.61:335,21,0	1/1:6,0:3:5.45:14,5,0
chr10	88901000	.	AG	A	2317.43	PASS	AB=0.838;AC=35;AF=0.625;AN=56;BaseQRankSum=9.218;DP=387;FS=7.941;HRun=1;HaplotypeScore=80.2240;InbreedingCoeff=0.4024;MQ=53.73;MQ0=56;MQRankSum=-5.943;QD=9.95;ReadPosRankSum=-0.288;VQSLOD=0.6839;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:11:6.88:7,0,27	0/0:11,0:9:20.34:0,20,290	0/0:23,0:12:3.96:0,4,180	0/0:17,0:8:6.83:0,7,136	1/1:7,12:17:20.18:255,20,0	1/1:5,7:7:17.55:117,18,0	1/1:3,1:2:2.97:20,3,0	1/1:11,1:9:9.30:183,9,0	0/1:6,0:5:4.22:33,0,4	0/0:19,0:16:47.13:0,47,613	0/0:24,0:22:47.75:0,48,681	1/1:5,2:7:8.99:75,9,0	1/1:5,7:8:17.84:122,18,0	1/1:5,4:7:14.58:97,15,0	1/1:4,4:6:14.52:88,15,0	0/1:5,5:7:11.66:75,0,12	0/0:32,0:27:75.18:0,75,1070	0/1:7,3:6:53.56:60,0,54	1/1:8,0:8:13.85:99,14,0	1/1:14,1:14:38.22:250,38,0	1/1:9,0:5:12.04:155,12,0	0/1:5,5:8:15.85:112,0,16	1/1:4,10:10:26.78:193,27,0	0/1:9,4:6:33.44:46,0,33	0/0:28,0:23:66.09:0,66,926	0/1:10,0:9:15.37:137,0,15	1/1:23,1:23:8.98:270,9,0	1/1:6,0:3:9.03:116,9,0
chr10	88901046	.	AAAGGAAGG	A	1252.47	PASS	AB=1.000;AC=25;AF=0.781;AN=32;BaseQRankSum=-0.263;DP=375;FS=3.765;HRun=0;HaplotypeScore=90.4171;InbreedingCoeff=0.3376;MQ=26.35;MQ0=145;MQRankSum=-1.642;QD=5.83;ReadPosRankSum=-1.569;VQSLOD=1.2313;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:10:1.15:3,1,0	1/1:13,0:10:21.01:224,21,0	./.	./.	0/1:23,0:19:10.52:221,0,11	1/1:6,0:4:9.02:100,9,0	./.	./.	1/1:9,0:5:3.01:35,3,0	1/1:23,0:14:24.06:273,24,0	./.	1/1:12,0:6:4.83:41,5,0	./.	1/1:10,0:5:6.02:69,6,0	./.	0/0:7,0:3:2.96:0,3,19	1/1:39,0:18:0.03:44,0,0	1/1:10,0:4:2.22:7,2,0	./.	./.	./.	1/1:15,0:13:19.54:211,20,0	./.	0/0:19,0:5:3.86:0,4,23	0/0:29,0:17:4.64:0,5,63	1/1:15,0:7:8.99:96,9,0	./.	1/1:10,0:3:3.01:34,3,0
chr10	88901095	.	AAG	A	481	PASS	AB=0.955;AC=10;AF=0.192;AN=52;BaseQRankSum=-1.456;DP=503;FS=28.313;HRun=0;HaplotypeScore=106.0245;InbreedingCoeff=-0.0667;MQ=24.98;MQ0=158;MQRankSum=-1.243;QD=2.63;ReadPosRankSum=-1.588;VQSLOD=0.6107;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:13:91.08:123,0,91	0/0:20,0:18:49:0,49,526	./.	./.	0/0:33,0:27:46.97:0,47,756	0/1:11,1:9:26.95:27,0,195	1/1:14,1:4:2.92:17,3,0	0/0:14,0:11:29.92:0,30,369	0/0:7,0:3:6:0,6,68	0/0:22,0:13:42.14:0,42,709	0/0:28,0:23:24.05:0,24,386	0/0:16,0:7:18.06:0,18,287	0/0:8,0:2:3.01:0,3,38	0/1:9,4:7:99:118,0,123	0/0:14,0:7:15:0,15,198	0/0:10,0:7:9.03:0,9,114	0/0:51,0:20:48.16:0,48,827	0/0:18,0:7:12.51:0,13,207	0/0:7,0:5:7.45:0,7,142	0/0:13,0:8:18.52:0,19,215	0/1:13,0:4:17.10:17,0,101	0/1:19,1:15:0.97:1,0,418	0/1:16,0:9:2.66:3,0,143	0/1:30,0:10:25.18:25,0,76	0/0:19,0:10:18.04:0,18,238	0/0:27,0:19:30.99:0,31,232	0/0:13,0:11:18.04:0,18,211	0/1:27,0:17:99:279,0,135
chr10	88901120	.	A	AG	419.70	PASS	AB=0.910;AC=9;AF=0.173;AN=52;BaseQRankSum=4.196;DP=510;FS=6.908;HRun=1;HaplotypeScore=132.8395;InbreedingCoeff=-0.0435;MQ=28.69;MQ0=111;MQRankSum=-4.157;QD=3.16;ReadPosRankSum=2.873;VQSLOD=0.1737;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:12:26.87:0,27,313	0/0:16,0:15:42.12:0,42,504	./.	./.	0/1:29,5:30:99:128,0,210	0/1:8,2:8:48.67:49,0,73	0/0:15,0:5:6.02:0,6,78	0/0:8,0:6:11.93:0,12,130	0/0:4,0:2:3.01:0,3,37	0/0:22,0:14:36.12:0,36,470	0/0:23,0:18:33.10:0,33,416	0/1:14,0:7:23.27:59,0,23	0/0:8,0:3:5.97:0,6,58	0/1:9,3:7:45.35:45,0,101	0/0:18,0:14:32.61:0,33,260	0/0:13,0:12:3.67:0,4,134	0/0:49,0:25:63.20:0,63,809	0/0:16,0:8:1.80:0,2,214	0/1:11,0:5:4.90:5,0,105	0/1:19,0:14:17.46:17,0,189	0/0:13,0:7:16.60:0,17,196	0/1:16,3:14:65.18:92,0,65	0/0:24,0:17:15.49:0,15,273	0/0:27,0:11:1.43:0,1,140	1/1:11,3:9:16.36:159,16,0	0/0:37,0:31:39.91:0,40,430	0/0:29,0:27:2.65:0,3,273	0/0:24,0:19:45.14:0,45,574
chr10	88901128	.	A	AG	1041.06	PASS	AB=0.901;AC=11;AF=0.204;AN=54;BaseQRankSum=2.231;DP=524;FS=9.757;HRun=1;HaplotypeScore=142.9663;InbreedingCoeff=-0.2903;MQ=30.00;MQ0=92;MQRankSum=-4.463;QD=4.86;ReadPosRankSum=-0.974;VQSLOD=-0.6352;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:15:30.08:0,30,364	0/0:17,0:16:11.63:0,12,418	0/0:4,0:1:3.01:0,3,38	./.	0/1:29,7:32:99:263,0,199	0/1:9,3:10:82.37:109,0,82	0/0:16,1:7:6.02:0,6,78	0/0:5,0:2:6.02:0,6,75	0/0:3,0:2:3:0,3,26	0/0:21,0:14:45.15:0,45,589	0/0:22,0:18:33.11:0,33,428	0/1:10,3:8:44.18:149,0,44	0/0:7,0:4:8.89:0,9,76	0/1:12,1:8:44.10:44,0,101	0/0:19,0:15:33:0,33,393	0/1:15,0:14:14.95:15,0,155	0/0:48,0:28:69.19:0,69,863	0/1:14,1:8:23.56:24,0,213	0/0:13,0:6:11.70:0,12,100	0/1:22,0:18:99:110,0,254	0/0:11,0:8:11.77:0,12,163	0/1:14,8:17:48.56:219,0,49	0/0:25,0:18:2.86:0,3,331	0/1:25,0:12:18.38:18,0,144	0/1:10,2:10:9.98:172,0,10	0/0:40,0:34:33.27:0,33,299	0/1:29,0:27:59.43:59,0,390	0/0:23,0:19:30.93:0,31,509
chr10	88901137	.	GAAAGGAAGAAAGAAAGAAAGGAAAGAAA	G	3854.49	PASS	AB=0.975;AC=19;AF=0.352;AN=54;BaseQRankSum=6.272;DP=537;FS=0.928;HRun=0;HaplotypeScore=339.4010;InbreedingCoeff=-0.4407;MQ=31.36;MQ0=72;MQRankSum=-4.231;QD=10.62;ReadPosRankSum=-6.977;VQSLOD=0.4586;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:18:56.61:57,0,279	0/0:18,0:17:39.39:0,39,1403	0/0:6,0:1:3.01:0,3,67	./.	0/1:35,0:31:99:202,0,197	0/1:14,0:12:38.48:120,0,38	0/0:16,0:7:6:0,6,90	0/0:7,0:2:5.75:0,6,65	1/1:4,0:3:6.01:89,6,0	0/0:20,0:14:40.65:0,41,1376	0/0:24,0:21:47.82:0,48,1669	0/1:14,0:11:30.28:129,0,30	0/1:10,0:7:45.85:46,0,78	0/1:13,0:9:22.92:23,0,133	0/0:19,0:16:7.53:0,8,354	0/1:15,0:15:10.43:10,0,195	0/0:46,0:28:72.17:0,72,2692	0/1:15,0:8:15.79:16,0,315	0/1:13,0:8:80.37:80,0,224	0/1:24,0:20:31.72:32,0,328	0/0:12,0:9:17.08:0,17,480	0/1:19,0:14:36.14:157,0,36	0/1:30,0:23:25.59:26,0,429	0/1:23,0:12:20.37:20,0,142	0/1:11,0:11:58.06:69,0,58	0/1:11,28:36:99:2181,0,122	0/1:32,0:31:24.04:24,0,366	0/1:23,0:20:99:573,0,775
chr10	88901153	.	GA	G	846.47	PASS	AB=0.986;AC=20;AF=0.357;AN=56;BaseQRankSum=5.937;DP=531;FS=2.078;HRun=3;HaplotypeScore=178.1209;InbreedingCoeff=-0.3466;MQ=39.66;MQ0=45;MQRankSum=-2.845;QD=2.33;ReadPosRankSum=-0.991;VQSLOD=-0.4128;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:22:46.56:47,0,176	0/0:16,0:16:39.12:0,39,510	0/0:18,0:5:10.39:0,10,129	0/1:16,1:5:10.82:11,0,32	0/1:28,1:27:57.61:219,0,58	0/1:12,0:11:4.81:92,0,5	0/1:11,0:6:5.69:13,0,6	0/1:11,0:6:25.89:26,0,50	1/1:4,1:5:11.39:73,11,0	0/0:16,0:13:41.85:0,42,522	0/0:20,0:19:25.44:0,25,551	0/1:11,0:9:52.90:77,0,53	0/0:10,0:10:5.54:0,6,220	0/1:13,0:12:52.32:52,0,55	0/0:22,0:21:9.85:0,10,495	0/1:15,1:16:24.89:25,0,303	0/0:40,0:30:71.76:0,72,904	0/0:14,0:8:15.96:0,16,132	0/1:11,0:8:12.21:12,0,108	0/1:25,1:22:25.32:25,0,489	0/1:11,0:9:3.58:4,0,147	0/1:18,0:15:26.65:129,0,27	0/1:28,1:25:19.37:19,0,567	0/1:18,0:11:12.80:13,0,52	0/0:11,0:11:15.80:0,16,201	0/1:37,0:34:38.51:131,0,39	0/1:35,1:35:7.67:8,0,629	0/1:23,0:21:31.09:31,0,381
chr10	88901156	.	AG	A	2822.78	PASS	AB=0.876;AC=29;AF=0.518;AN=56;BaseQRankSum=2.598;DP=511;FS=3.738;HRun=2;HaplotypeScore=166.1790;InbreedingCoeff=-0.4751;MQ=41.80;MQ0=41;MQRankSum=-3.045;QD=6.43;ReadPosRankSum=-2.996;VQSLOD=-0.2709;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:11,13:21:99:173,0,117	0/0:12,3:15:37.72:0,38,264	0/0:19,0:6:6.42:0,6,146	0/1:24,0:6:27.13:27,0,37	0/1:14,12:24:3.64:451,0,4	1/1:5,6:10:15.06:254,15,0	1/1:6,5:7:5.10:72,5,0	0/1:8,3:6:29.87:109,0,30	1/1:2,3:5:11.93:132,12,0	0/1:17,0:14:13.74:14,0,290	0/1:17,3:19:57.85:58,0,263	0/1:5,5:9:35.04:202,0,35	0/1:10,0:10:12.27:12,0,199	0/1:5,7:11:18.73:151,0,19	0/1:20,1:21:24.84:25,0,514	0/1:14,1:15:43.21:43,0,294	0/0:38,0:28:37.26:0,37,561	0/1:13,1:8:1.93:2,0,80	0/1:8,2:7:53.54:54,0,103	0/1:21,1:19:76.81:77,0,478	0/1:9,2:9:23.48:23,0,152	1/1:7,10:15:18.94:350,19,0	0/1:25,0:24:53.39:53,0,562	0/1:14,1:9:29.71:30,0,53	0/1:11,0:11:27.25:27,0,66	0/1:34,3:34:11.19:400,0,11	0/1:33,1:33:53.54:54,0,582	0/1:19,5:22:99:194,0,322
chr10	88901157	.	G	GAAA	4676.34	PASS	AB=0.953;AC=31;AF=0.554;AN=56;BaseQRankSum=-1.813;DP=509;FS=7.398;HRun=3;HaplotypeScore=178.5583;InbreedingCoeff=-0.6065;MQ=41.90;MQ0=40;MQRankSum=4.813;QD=9.56;ReadPosRankSum=0.903;VQSLOD=1.0934;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:21:99:173,0,127	0/1:15,0:15:65.12:205,0,65	0/0:20,0:6:5.82:0,6,156	0/1:25,0:6:19.17:19,0,45	0/1:26,0:24:2.77:471,0,3	1/1:11,0:11:14.93:284,15,0	1/1:11,0:7:2.70:69,3,0	0/1:10,0:5:35.13:129,0,35	1/1:5,0:5:11.25:172,11,0	0/1:17,0:15:99:139,0,176	0/1:20,0:19:2.69:362,0,3	0/1:10,0:9:34.74:219,0,35	0/1:9,1:10:47.87:48,0,197	0/1:11,0:10:21.33:151,0,21	0/1:18,3:21:65.56:66,0,515	0/1:12,3:15:97.47:97,0,291	0/1:36,0:28:99:299,0,177	0/1:14,0:8:1.02:1,0,87	0/1:10,0:7:49.30:49,0,108	0/1:17,5:19:99:194,0,464	0/1:11,0:9:47.98:48,0,153	1/1:18,0:17:27.79:374,28,0	0/1:20,5:24:99:180,0,519	0/1:13,1:9:33.37:33,0,43	0/1:11,0:11:39.23:46,0,39	0/1:37,0:34:3.09:436,0,3	0/1:21,13:33:99:230,0,571	0/1:25,0:22:99:181,0,219
chr10	88901158	.	GA	G	1004.75	PASS	AB=0.974;AC=20;AF=0.357;AN=56;BaseQRankSum=4.501;DP=508;FS=4.827;HRun=3;HaplotypeScore=174.9613;InbreedingCoeff=-0.0810;MQ=41.94;MQ0=39;MQRankSum=-1.814;QD=3.86;ReadPosRankSum=-1.753;VQSLOD=-0.3677;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,1:21:89.61:90,0,149	0/0:14,0:14:32.84:0,33,289	0/0:19,1:6:3.61:0,4,175	0/1:26,1:6:36.93:37,0,40	1/1:25,0:23:1.24:227,1,0	1/1:9,2:11:1.90:162,2,0	0/1:10,0:7:15.62:16,0,17	0/1:9,0:5:28.38:28,0,32	1/1:5,0:5:11.16:58,11,0	0/0:17,0:15:36.42:0,36,353	0/0:20,0:19:20.68:0,21,376	0/1:8,2:9:18.41:147,0,18	0/0:10,0:10:7.78:0,8,243	0/1:11,0:10:61.26:61,0,70	0/0:22,0:22:17.80:0,18,571	0/0:15,0:15:1.55:0,2,306	0/0:37,0:29:69.91:0,70,674	0/1:13,1:8:18.91:19,0,118	0/1:10,0:7:13.42:13,0,112	0/0:22,0:19:8.84:0,9,506	0/1:10,0:9:5.58:6,0,150	1/1:16,1:16:8.40:171,8,0	0/0:25,0:24:13.11:0,13,592	0/1:14,0:9:10.80:11,0,50	0/0:11,0:11:5.67:0,6,136	0/1:37,0:34:79.23:79,0,141	0/0:34,0:33:32.75:0,33,707	0/1:25,0:22:41.94:42,0,372
chr10	88901165	.	A	AG	1013.92	PASS	AB=0.851;AC=4;AF=0.071;AN=56;BaseQRankSum=-1.272;DP=489;FS=0.663;HRun=1;HaplotypeScore=177.6352;InbreedingCoeff=0.0478;MQ=44.19;MQ0=29;MQRankSum=4.261;QD=12.83;ReadPosRankSum=0.715;VQSLOD=2.6325;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:31.01:0,31,311	0/0:11,0:11:2.34:0,2,56	0/0:25,0:6:17.82:0,18,191	0/0:30,0:7:13.07:0,13,116	0/0:23,0:22:50.21:0,50,564	0/0:9,0:9:23.99:0,24,286	0/0:8,0:6:9.03:0,9,115	0/1:5,7:7:17.71:233,0,18	0/0:5,0:5:5.56:0,6,110	0/0:15,0:13:28.16:0,28,262	0/0:22,0:21:26.29:0,26,326	0/0:9,0:8:20.73:0,21,223	0/0:11,0:11:17.58:0,18,190	0/0:11,0:10:20.14:0,20,211	0/0:23,0:23:53.89:0,54,540	0/0:15,0:15:33.02:0,33,376	0/0:31,0:26:29.94:0,30,346	0/0:8,0:5:10:0,10,72	0/0:9,0:8:14.61:0,15,123	0/0:22,0:19:51:0,51,556	0/1:7,0:6:31.44:31,0,103	0/0:15,0:15:45.02:0,45,539	0/0:25,0:25:59.91:0,60,638	0/0:10,0:8:6:0,6,61	0/0:12,0:12:26.90:0,27,270	0/1:36,0:33:2.23:590,0,2	0/0:37,0:36:72.68:0,73,730	0/1:17,7:20:99:268,0,243
chr10	88901185	.	AG	A	943.43	PASS	AB=0.866;AC=9;AF=0.167;AN=54;BaseQRankSum=8.227;DP=443;FS=12.160;HRun=1;HaplotypeScore=176.2250;InbreedingCoeff=-0.1998;MQ=47.61;MQ0=21;MQRankSum=-6.049;QD=6.05;ReadPosRankSum=0.455;VQSLOD=-0.7216;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:14.74:0,15,228	0/0:8,0:8:24.08:0,24,348	0/0:30,0:7:20.96:0,21,279	0/0:38,0:10:20.60:0,21,253	0/0:19,0:19:55.37:0,55,560	0/0:9,0:9:26.66:0,27,178	0/0:7,0:6:8.26:0,8,69	0/0:24,0:21:60.07:0,60,872	0/0:9,0:9:24.01:0,24,336	0/0:10,0:9:24.08:0,24,367	0/0:21,0:21:63.19:0,63,908	0/0:5,0:5:14.57:0,15,114	0/1:9,4:13:14.39:183,0,14	0/0:8,0:8:17.15:0,17,103	0/1:18,5:23:99:174,0,252	0/1:13,1:14:43.78:44,0,154	0/0:23,0:22:63.21:0,63,923	./.	0/1:9,1:9:20.13:20,0,201	0/1:14,5:19:99:153,0,180	0/1:3,0:3:4.44:4,0,40	0/0:16,0:16:27.25:0,27,290	0/1:20,3:23:83.14:83,0,245	0/0:2,0:2:3.01:0,3,45	0/1:11,1:12:18.98:19,0,124	0/0:30,0:27:50.20:0,50,750	0/1:27,12:38:99:399,0,363	0/0:13,0:8:24.08:0,24,365
chr10	88901188	.	AAAGAAAGG	A	10626.94	PASS	AB=1.000;AC=29;AF=0.558;AN=52;BaseQRankSum=5.865;DP=452;FS=2.229;HRun=0;HaplotypeScore=207.7072;InbreedingCoeff=0.8254;MQ=47.53;MQ0=21;MQRankSum=-8.711;QD=44.65;ReadPosRankSum=0.615;VQSLOD=4.7787;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:13:4.61:5,0,468	0/0:9,0:9:12.04:0,12,423	0/0:30,0:7:0.34:0,0,150	0/0:36,0:10:9.02:0,9,202	1/1:7,12:19:44.82:950,45,0	1/1:1,9:10:30.10:740,30,0	1/1:4,3:6:9.03:208,9,0	0/0:24,0:21:43.39:0,43,1393	0/0:10,0:10:27.09:0,27,1015	0/0:10,0:9:21.07:0,21,656	0/0:22,0:22:51.18:0,51,2048	1/1:1,4:5:15.05:347,15,0	1/1:5,7:12:30.10:740,30,0	1/1:3,7:10:24.08:569,24,0	1/1:15,8:23:33.11:812,33,0	1/1:8,6:14:21.07:513,21,0	0/0:25,0:24:45.15:0,45,1687	./.	1/1:9,1:9:3.01:71,3,0	1/1:14,8:22:51.13:1137,51,0	0/0:3,0:3:3.01:0,3,125	1/1:4,14:18:54.19:1288,54,0	1/1:12,10:22:33.11:796,33,0	./.	1/1:11,1:12:36.12:829,36,0	0/0:27,0:25:42.14:0,42,1594	1/1:31,9:39:66.23:1624,66,0	0/0:16,0:8:21.07:0,21,651
chr10	88901193	.	AAGG	A	3070.60	PASS	AB=0.876;AC=20;AF=0.370;AN=54;BaseQRankSum=9.997;DP=434;FS=5.955;HRun=0;HaplotypeScore=189.8754;InbreedingCoeff=0.1981;MQ=48.14;MQ0=20;MQRankSum=-7.998;QD=13.71;ReadPosRankSum=5.003;VQSLOD=2.5890;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:13:0.05:0,0,324	0/0:7,0:7:21.06:0,21,391	0/0:32,1:7:14.65:0,15,267	0/0:32,1:10:22.92:0,23,367	0/1:19,0:19:99:125,0,283	1/1:9,1:10:29.34:208,29,0	1/1:7,0:6:2.34:31,2,0	0/0:25,0:22:60.21:0,60,1353	0/0:11,0:11:30.10:0,30,681	0/0:10,0:10:30.10:0,30,670	0/0:20,0:20:60.21:0,60,1341	0/1:5,0:5:5.62:57,0,6	0/1:8,4:12:4.56:300,0,5	1/1:9,1:10:23.62:177,24,0	0/1:13,5:18:99:321,0,234	0/1:11,1:12:99:133,0,122	0/0:23,0:23:66.20:0,66,1321	./.	0/1:9,1:9:32.60:33,0,113	0/1:16,6:22:99:395,0,166	0/0:3,0:3:2.65:0,3,71	1/1:17,1:18:42.09:317,42,0	0/1:15,3:18:99:226,0,172	0/0:2,0:2:3.01:0,3,57	1/1:11,2:13:16.25:229,16,0	0/0:26,0:24:51.14:0,51,1099	0/1:24,12:36:99:694,0,257	0/0:17,0:8:24.08:0,24,554
chr10	88901210	.	AG	A	669.70	PASS	AB=0.923;AC=14;AF=0.250;AN=56;BaseQRankSum=9.539;DP=444;FS=2.008;HRun=2;HaplotypeScore=176.9018;InbreedingCoeff=-0.1317;MQ=38.94;MQ0=18;MQRankSum=-9.065;QD=3.37;ReadPosRankSum=7.988;VQSLOD=0.0281;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:15.01:0,15,199	0/0:7,0:7:18.05:0,18,251	0/0:29,0:5:14.94:0,15,195	0/0:22,0:6:18.02:0,18,244	0/1:18,4:19:10.92:154,0,11	0/1:12,0:11:46.76:51,0,47	0/1:9,1:8:14.29:14,0,117	0/0:34,0:30:87.23:0,87,1270	0/0:11,0:11:30.10:0,30,445	0/0:14,0:14:42.10:0,42,572	0/0:21,0:21:63.18:0,63,897	0/1:5,1:6:30.09:53,0,30	0/1:14,0:14:21.67:22,0,70	0/0:15,1:16:2.65:0,3,234	1/1:16,0:16:12.14:32,12,0	0/1:12,0:12:15.97:16,0,56	0/0:20,0:20:54.18:0,54,805	0/1:1,0:1:0:0,0,0	0/0:7,1:7:2.31:0,2,59	0/1:21,1:22:70.17:70,0,183	0/0:4,0:4:6.02:0,6,90	0/1:19,2:21:82.39:82,0,145	0/1:16,0:16:20.48:75,0,20	0/0:4,0:4:3.01:0,3,42	0/1:5,10:15:28.82:221,0,29	0/0:26,0:21:51.17:0,51,772	0/1:32,0:32:30.76:31,0,157	0/0:16,0:7:21.07:0,21,313
chr10	88901217	.	AAG	A	385.73	PASS	AB=0.952;AC=9;AF=0.161;AN=56;BaseQRankSum=2.737;DP=439;FS=2.400;HRun=0;HaplotypeScore=183.8588;InbreedingCoeff=-0.2037;MQ=39.07;MQ0=16;MQRankSum=-5.673;QD=2.70;ReadPosRankSum=-0.432;VQSLOD=2.0901;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:15.02:0,15,253	0/0:6,0:6:18.06:0,18,347	0/0:31,0:6:17.69:0,18,239	0/0:20,0:6:18.06:0,18,319	0/1:22,0:19:29.65:30,0,48	0/1:13,0:12:40.37:40,0,82	0/1:9,0:8:17.85:18,0,152	0/0:32,0:29:81.28:0,81,1511	0/0:11,0:11:30.10:0,30,578	0/0:12,0:12:36.11:0,36,662	0/0:25,0:25:75.26:0,75,1445	0/1:7,0:7:13.01:13,0,103	0/1:15,0:15:3.19:3,0,178	0/0:16,0:16:21.64:0,22,404	0/0:13,0:13:8.22:0,8,30	0/0:13,0:13:3.77:0,4,262	0/0:19,0:19:54.19:0,54,1039	0/0:1,0:1:3.01:0,3,31	0/0:10,0:8:14.08:0,14,213	0/1:23,1:23:81.97:82,0,316	0/0:4,0:4:6.02:0,6,116	0/1:19,1:21:61.57:62,0,206	0/1:15,0:15:29.31:29,0,53	0/0:3,0:3:2.50:0,2,9	0/1:8,9:17:99:242,0,130	0/0:26,0:21:51.17:0,51,984	0/0:28,0:28:33.36:0,33,367	0/0:15,0:6:15.05:0,15,288
chr10	88901247	.	G	GAA	1287.91	PASS	AB=0.917;AC=14;AF=0.250;AN=56;BaseQRankSum=0.842;DP=362;FS=19.006;HRun=3;HaplotypeScore=159.6094;InbreedingCoeff=0.6375;MQ=38.39;MQ0=19;MQRankSum=-4.355;QD=14.80;ReadPosRankSum=1.263;VQSLOD=-0.2551;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:7,2:10:26.83:57,0,27	0/0:5,0:5:14.75:0,15,142	0/0:12,0:3:6.49:0,6,85	0/0:12,0:2:6:0,6,53	1/1:14,2:13:23.80:208,24,0	1/1:10,0:9:20.99:253,21,0	1/1:5,2:5:9.03:116,9,0	0/0:17,0:14:24.51:0,25,147	0/1:12,0:11:4.43:4,0,9	0/0:17,0:17:44.44:0,44,463	0/0:25,0:25:67.35:0,67,589	1/1:4,0:4:3.05:81,3,0	0/0:14,0:13:21.91:0,22,127	1/1:15,0:15:32.99:363,33,0	0/0:12,0:12:21.06:0,21,117	0/0:14,0:14:22.62:0,23,171	0/0:15,0:16:35.26:0,35,431	0/0:4,0:4:6.02:0,6,77	0/0:12,0:7:10.66:0,11,60	0/0:21,0:20:17.44:0,17,107	0/0:2,0:2:5.83:0,6,38	1/1:13,0:13:35.94:380,36,0	0/0:6,0:6:6.69:0,7,36	0/0:5,0:4:3.48:0,3,42	0/0:23,0:23:42.08:0,42,238	0/0:17,0:13:31.69:0,32,303	0/0:29,0:28:56.64:0,57,297	0/0:12,0:3:0.55:0,1,39
chr10	88901251	.	G	GAA	2763.65	PASS	AB=0.937;AC=29;AF=0.518;AN=56;BaseQRankSum=7.962;DP=344;FS=12.966;HRun=3;HaplotypeScore=148.4095;InbreedingCoeff=0.2702;MQ=38.64;MQ0=19;MQRankSum=-5.774;QD=11.86;ReadPosRankSum=0.805;VQSLOD=-0.4191;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:10:4.10:33,0,4	0/0:6,0:6:17.79:0,18,178	0/0:10,0:3:5.91:0,6,92	0/0:9,0:2:3:0,3,26	0/1:14,0:11:34.76:40,0,35	0/0:10,0:9:0.56:0,1,28	1/1:6,0:4:0.91:3,1,0	1/1:13,0:10:25.46:255,25,0	1/1:12,0:11:32.73:309,33,0	0/0:18,0:18:49.41:0,49,531	0/0:25,0:25:70.46:0,70,642	0/1:4,0:4:3.02:3,0,26	1/1:14,0:13:27.91:220,28,0	0/1:13,0:13:4.62:5,0,47	1/1:11,0:11:28.62:251,29,0	0/1:14,0:14:58.13:208,0,58	0/0:16,0:16:30.21:0,30,437	0/0:4,0:4:5.61:0,6,56	1/1:11,0:6:8.48:65,8,0	1/1:19,0:19:39.73:416,40,0	1/1:2,0:2:6.01:64,6,0	0/0:13,0:13:4.25:0,4,53	1/1:6,0:6:11.99:129,12,0	0/1:4,1:4:12.01:30,0,12	0/1:21,0:21:36.76:37,0,100	0/1:14,4:14:53.23:220,0,53	1/1:28,1:28:72.24:638,72,0	0/1:8,3:2:8.94:20,0,9
chr10	88901252	.	AG	A	1677.99	PASS	AB=0.699;AC=25;AF=0.446;AN=56;BaseQRankSum=7.717;DP=333;FS=19.402;HRun=1;HaplotypeScore=138.3698;InbreedingCoeff=0.1525;MQ=38.91;MQ0=19;MQRankSum=-7.286;QD=8.47;ReadPosRankSum=4.941;VQSLOD=-0.2810;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:9:15.84:45,0,16	0/0:7,0:7:21.04:0,21,303	0/0:9,0:3:6.02:0,6,96	0/0:8,0:1:3:0,3,26	0/1:7,7:11:16.89:37,0,17	0/1:4,6:9:19.76:56,0,20	1/1:3,3:4:8.63:46,9,0	0/1:8,6:11:60.05:73,0,60	1/1:1,11:11:30.47:182,30,0	0/0:18,0:18:54.17:0,54,806	0/0:25,0:25:72.23:0,72,1077	0/1:2,2:4:12.86:13,0,19	1/1:4,8:11:11.35:142,11,0	0/1:5,4:13:16.05:76,0,16	0/1:2,7:9:6.26:92,0,6	0/1:3,11:14:57.04:175,0,57	0/0:15,0:15:20.67:0,21,493	0/0:4,0:4:5.98:0,6,68	1/1:8,3:6:11.89:82,12,0	1/1:1,17:18:29.28:270,29,0	0/1:1,1:2:6.45:16,0,6	0/1:5,6:13:48.43:74,0,48	1/1:0,5:5:12.70:77,13,0	0/1:5,0:4:7.47:13,0,7	0/0:20,0:20:10.24:0,10,347	0/0:14,4:14:6.42:0,6,130	1/1:5,22:26:25.66:393,26,0	0/0:5,6:2:5.48:0,5,24
chr10	88901254	.	AG	A	1428.79	PASS	AB=0.850;AC=24;AF=0.444;AN=54;BaseQRankSum=8.385;DP=331;FS=15.963;HRun=1;HaplotypeScore=143.7336;InbreedingCoeff=0.1983;MQ=39.19;MQ0=19;MQRankSum=-6.837;QD=7.52;ReadPosRankSum=5.761;VQSLOD=-0.6195;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:5.22:0,5,61	0/0:7,0:7:21.07:0,21,324	0/0:7,0:3:6.02:0,6,96	./.	0/1:13,0:10:8.20:36,0,8	0/1:9,0:8:42.18:58,0,42	1/1:6,0:4:8.68:47,9,0	0/1:9,6:11:64.85:67,0,65	1/1:5,7:11:30.64:184,31,0	0/0:18,0:18:54.11:0,54,776	0/0:25,0:25:75.23:0,75,1114	0/1:4,0:4:12.88:13,0,52	1/1:4,3:11:7.97:82,8,0	0/1:13,0:13:27.47:85,0,27	0/1:2,5:9:7.71:80,0,8	0/1:3,5:14:58.42:139,0,58	0/0:15,0:15:34.98:0,35,467	0/0:4,0:4:9:0,9,112	1/1:8,1:7:14.15:83,14,0	1/1:1,8:18:43.86:253,44,0	0/1:1,1:2:8.94:16,0,9	0/1:14,0:14:63.71:84,0,64	1/1:1,3:6:11.68:63,12,0	0/1:5,0:4:12.33:12,0,20	0/0:22,0:22:59.16:0,59,709	0/0:14,4:14:7.39:0,7,262	1/1:5,12:26:21.44:310,21,0	0/0:5,6:2:5.90:0,6,41
chr10	88901310	.	AAGAG	A	3956.59	PASS	AB=0.632;AC=17;AF=0.304;AN=56;BaseQRankSum=3.212;DP=516;FS=22.072;HRun=0;HaplotypeScore=133.8951;InbreedingCoeff=0.9082;MQ=58.65;MQ0=2;MQRankSum=-3.402;QD=27.48;ReadPosRankSum=-0.426;VQSLOD=1.9820;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,4:21:57.59:949,58,0	0/0:11,0:11:33.11:0,33,832	0/0:17,0:16:48.14:0,48,1010	0/0:14,0:10:27.03:0,27,540	1/1:1,17:18:39.13:649,39,0	1/1:0,25:25:30.10:533,30,0	1/1:14,0:12:20.92:230,21,0	0/0:39,0:39:84.17:0,84,1782	1/1:5,4:9:27.05:463,27,0	0/0:24,0:24:68.30:0,68,1537	0/0:29,0:29:42.09:0,42,1767	1/1:1,15:16:21.07:361,21,0	0/0:15,0:15:36:0,36,676	1/1:2,16:18:18.06:304,18,0	0/0:21,0:19:57.18:0,57,1221	0/0:17,0:17:42.12:0,42,845	0/0:16,0:16:13.56:0,14,657	0/1:5,7:10:21.80:142,0,22	0/0:19,0:19:48.11:0,48,1025	0/0:27,0:27:78.23:0,78,1625	0/0:12,0:12:33.11:0,33,750	1/1:1,10:11:21.03:324,21,0	0/0:10,0:10:27.09:0,27,608	0/0:15,0:14:33.11:0,33,772	0/0:28,0:28:50.40:0,50,1468	0/0:22,0:21:60.16:0,60,1419	0/0:28,0:27:66.23:0,66,1368	0/0:8,0:8:24.01:0,24,449
chr10	88902326	.	A	AC	29356.92	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-17.262;DP=865;FS=9.953;HRun=1;HaplotypeScore=71.4785;InbreedingCoeff=1.0000;MQ=84.36;MQ0=0;MQRankSum=-5.335;QD=44.08;ReadPosRankSum=4.498;VQSLOD=3.9809;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,58:59:99:2638,166,0	0/0:18,0:18:54.18:0,54,755	0/0:26,0:26:78.23:0,78,1055	0/0:31,0:31:87.28:0,87,1180	1/1:0,22:22:63.21:1007,63,0	1/1:0,22:22:60.20:959,60,0	1/1:0,31:31:87.30:1391,87,0	1/1:0,31:31:93.32:1483,93,0	1/1:0,31:31:90.31:1438,90,0	0/0:39,0:39:99:0,114,1581	0/0:22,0:22:66.22:0,66,923	1/1:1,25:26:72.25:1151,72,0	1/1:2,31:33:90.29:1415,90,0	1/1:0,30:30:90.31:1438,90,0	1/1:1,40:41:99:1678,105,0	1/1:1,35:36:99:1583,99,0	0/0:43,0:43:99:0,126,1757	1/1:1,16:17:42.14:671,42,0	1/1:1,19:20:57.19:912,57,0	1/1:1,30:32:84.28:1327,84,0	1/1:3,50:53:99:2302,144,0	1/1:2,32:34:87.30:1391,87,0	1/1:0,18:18:48.16:767,48,0	1/1:0,49:49:99:2206,138,0	0/0:20,0:20:60.20:0,60,839	1/1:2,29:31:48.33:1346,48,0	1/1:0,36:35:99:1630,102,0	1/1:0,14:14:39.13:623,39,0
chr10	88904254	.	AT	A	3929.73	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=10.051;DP=311;FS=22.759;HRun=9;HaplotypeScore=51.9933;InbreedingCoeff=0.9455;MQ=68.94;MQ0=3;MQRankSum=3.101;QD=21.01;ReadPosRankSum=1.585;VQSLOD=2.2707;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:17:33.01:302,33,0	0/0:8,0:8:18.05:0,18,208	0/0:8,0:7:9.03:0,9,104	0/0:6,1:7:15.04:0,15,169	1/1:3,11:15:35.05:308,35,0	1/1:1,6:7:15.01:137,15,0	1/1:3,7:9:18:165,18,0	0/0:20,0:20:42.03:0,42,446	1/1:0,9:9:27.01:247,27,0	0/0:16,0:16:39.12:0,39,450	0/0:16,0:15:42.09:0,42,471	1/1:0,5:5:15.01:137,15,0	1/1:2,6:8:18.01:165,18,0	1/1:2,7:9:18.01:165,18,0	1/1:0,8:7:21.01:192,21,0	1/1:0,9:9:24.01:220,24,0	0/0:19,0:19:48.14:0,48,553	1/1:3,14:17:39.02:357,39,0	1/1:7,9:15:27.01:247,27,0	1/1:1,10:11:30.02:275,30,0	0/0:14,0:14:39.12:0,39,450	1/1:2,7:9:18.01:165,18,0	1/1:2,13:15:39.02:356,39,0	1/1:1,6:7:12.01:110,12,0	0/0:1,0:1:3.01:0,3,35	0/0:6,0:6:15.04:0,15,173	1/1:0,15:15:42.02:384,42,0	0/0:9,0:9:27.08:0,27,312
chr10	88905351	.	CT	C	5076.62	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=17.013;DP=647;FS=1.908;HRun=7;HaplotypeScore=83.3586;InbreedingCoeff=0.9990;MQ=69.83;MQ0=0;MQRankSum=-0.410;QD=26.72;ReadPosRankSum=2.845;VQSLOD=5.5581;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.26:0,93,1143	0/0:8,0:8:21.07:0,21,264	0/0:11,0:11:30.03:0,30,329	0/0:11,0:11:26.95:0,27,309	0/0:25,0:25:69.21:0,69,852	0/0:21,0:21:63.18:0,63,767	0/0:27,0:27:75.24:0,75,942	0/0:34,0:34:78.24:0,78,970	0/0:27,0:27:81.21:0,81,989	0/0:36,0:36:99:0,99,1235	0/0:15,0:15:39.12:0,39,479	0/0:28,0:28:84.26:0,84,1046	1/1:1,26:27:75.17:765,75,0	0/0:28,0:28:81.25:0,81,1008	1/1:1,20:21:57.13:580,57,0	1/1:2,15:17:39.09:398,39,0	0/0:21,0:21:60.18:0,60,741	0/0:22,0:22:63.16:0,63,775	1/1:0,16:16:48.11:489,48,0	1/1:0,30:30:87.20:888,87,0	0/0:24,0:24:63.20:0,63,793	0/0:25,0:25:66.20:0,66,816	1/1:4,14:18:42.09:427,42,0	1/1:3,29:32:75.17:765,75,0	0/0:18,0:17:48.15:0,48,593	0/0:22,0:22:63.19:0,63,779	1/1:2,27:29:75.17:765,75,0	0/0:23,0:23:57.18:0,57,717
chr10	88905882	.	A	AT	1509.30	PASS	AB=0.737;AC=8;AF=0.143;AN=56;BaseQRankSum=-5.356;DP=544;FS=1.751;HRun=9;HaplotypeScore=60.3967;InbreedingCoeff=0.7570;MQ=65.55;MQ0=2;MQRankSum=-0.304;QD=14.80;ReadPosRankSum=-2.840;VQSLOD=3.1929;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:47:99:0,108,877	0/0:11,0:12:32.03:0,32,266	0/0:18,0:11:11.73:0,12,150	0/0:15,0:10:22.44:0,22,169	0/0:22,0:22:53.98:0,54,468	0/0:13,0:14:41.03:0,41,344	0/0:20,0:20:41.95:0,42,361	1/1:13,18:31:50.89:517,51,0	0/0:11,0:11:23.98:0,24,208	0/0:15,0:15:38.99:0,39,339	0/0:19,0:19:47.96:0,48,416	0/0:20,0:20:44.92:0,45,381	0/0:10,0:10:20.99:0,21,182	0/0:18,0:18:50.97:0,51,439	0/0:21,0:21:50.98:0,51,443	0/0:11,0:12:26:0,26,211	0/0:23,0:24:58.97:0,59,495	0/0:24,0:25:56:0,56,474	0/0:19,0:18:38.96:0,39,333	0/0:23,0:23:47.94:0,48,413	0/1:2,9:11:27.78:175,0,28	0/0:17,0:17:44.99:0,45,390	0/0:17,0:17:48.41:0,48,406	0/0:18,0:18:50.99:0,51,443	0/1:11,1:12:0.21:0,0,224	1/1:10,19:29:31.06:552,31,0	0/0:25,0:25:65.97:0,66,572	1/1:3,14:18:38.94:412,39,0
chr10	88907180	.	TCC	T	6737.97	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.973;DP=757;FS=0.000;HRun=3;HaplotypeScore=137.3930;InbreedingCoeff=0.9999;MQ=87.77;MQ0=0;MQRankSum=-5.859;QD=39.17;ReadPosRankSum=5.557;VQSLOD=4.0598;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,166,3094	0/0:12,0:12:36.12:0,36,669	0/0:26,0:26:75.22:0,75,1324	0/0:29,0:29:81.26:0,81,1488	1/1:0,23:23:54.17:826,54,0	1/1:0,16:16:42.14:642,42,0	1/1:2,28:30:78.26:1193,78,0	0/0:34,0:34:99:0,102,1859	0/0:23,0:23:69.22:0,69,1274	0/0:23,0:23:69.22:0,69,1262	0/0:21,0:21:63.21:0,63,1176	1/1:0,31:31:81.28:1239,81,0	0/0:24,0:24:69.20:0,69,1251	1/1:2,26:28:69.23:1047,69,0	0/0:34,0:33:99:0,102,1963	0/0:30,0:30:84.29:0,84,1607	0/0:33,0:33:99:0,99,1761	1/1:0,24:24:63.21:964,63,0	0/0:16,0:16:48.16:0,48,926	0/0:21,0:21:63.14:0,63,1068	0/0:49,0:49:99:0,147,2677	1/1:0,20:20:54.18:826,54,0	0/0:28,0:28:84.24:0,84,1512	0/0:29,0:29:87.29:0,87,1629	0/0:25,0:25:75.26:0,75,1407	0/0:36,0:36:99:0,108,2000	0/0:26,0:26:78.27:0,78,1490	0/0:11,0:11:33.11:0,33,637
chr10	88908420	.	GCAT	G	2848.38	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.635;DP=591;FS=1.059;HRun=0;HaplotypeScore=82.5725;InbreedingCoeff=0.9995;MQ=83.48;MQ0=0;MQRankSum=-3.512;QD=41.28;ReadPosRankSum=2.114;VQSLOD=4.9956;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,2847	0/0:11,0:11:30.09:0,30,661	0/0:20,0:20:57.18:0,57,1131	0/0:19,0:19:54.11:0,54,1086	0/0:19,0:19:54.19:0,54,1275	0/0:24,0:24:66.21:0,66,1508	0/0:13,0:13:36.12:0,36,849	0/0:29,0:29:87.28:0,87,1971	0/0:13,0:13:39.13:0,39,922	0/0:29,0:29:87.30:0,87,2055	0/0:20,0:20:60.21:0,60,1404	0/0:24,0:24:72.23:0,72,1625	0/0:10,0:10:30.10:0,30,709	0/0:25,0:25:69.22:0,69,1570	0/0:16,0:16:48.16:0,48,1130	0/0:14,0:14:39.13:0,39,920	0/0:40,0:40:99:0,120,2732	0/0:15,0:15:45.14:0,45,990	1/1:0,19:19:54.17:895,54,0	1/1:0,26:26:63.01:1039,63,0	0/0:19,0:19:57.20:0,57,1345	0/0:18,0:18:54.19:0,54,1277	0/0:21,0:21:63.18:0,63,1345	0/0:21,0:21:63.20:0,63,1442	0/0:17,0:16:48.16:0,48,1135	0/0:26,0:26:78.26:0,78,1800	1/1:1,23:24:60.21:1057,60,0	0/0:14,0:14:42.04:0,42,795
chr10	88908853	.	ACAGTTACCGTATACGATTGGGCCTTTGGTGG	A	5686.72	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.639;DP=710;FS=0.745;HRun=0;HaplotypeScore=529.2711;InbreedingCoeff=0.9316;MQ=86.19;MQ0=0;MQRankSum=-7.309;QD=96.39;ReadPosRankSum=3.275;VQSLOD=2.4902;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,157,17662	1/1:1,1:2:3.01:247,3,0	0/0:32,0:32:89.51:0,90,5137	0/0:16,0:16:48.13:0,48,3193	0/0:23,0:23:69.24:0,69,7424	0/0:24,0:24:66.23:0,66,7160	0/0:27,0:27:78.27:0,78,8199	0/0:30,0:30:84.28:0,84,6066	0/0:19,0:19:54.16:0,54,6626	1/1:7,11:18:33.07:2109,33,0	1/1:9,12:21:30.10:2403,30,0	0/0:32,0:32:96.33:0,96,11332	0/0:19,0:19:54.19:0,54,6215	0/0:28,0:28:84.29:0,84,9773	0/0:27,0:27:81.28:0,81,9665	0/0:31,0:31:93.32:0,93,10536	1/1:8,10:18:12.04:928,12,0	0/0:34,0:34:96.33:0,96,12081	0/0:26,0:26:75.26:0,75,6774	0/0:30,0:30:90.29:0,90,8641	0/0:33,0:33:96.30:0,96,10240	0/0:24,0:24:69.22:0,69,7970	0/0:17,0:17:51.18:0,51,5305	0/0:37,0:37:99:0,111,12966	0/0:24,0:24:72.25:0,72,9165	0/0:30,0:30:90.31:0,90,9898	0/0:27,0:27:78.27:0,78,9349	0/0:5,0:5:12.04:0,12,1342
chr10	88910221	.	A	AT	1488.02	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.801;DP=586;FS=2.689;HRun=7;HaplotypeScore=57.4575;InbreedingCoeff=0.9855;MQ=70.62;MQ0=0;MQRankSum=-0.426;QD=25.66;ReadPosRankSum=1.678;VQSLOD=4.4086;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:51.16:616,51,0	0/0:14,0:14:39.03:0,39,365	0/0:17,0:14:21.05:0,21,270	0/0:8,0:8:11.83:0,12,94	0/0:29,0:29:87.11:0,87,827	0/0:23,0:23:60.09:0,60,579	0/0:24,0:24:72.10:0,72,688	0/0:29,0:29:66.09:0,66,632	1/1:3,14:17:36.11:435,36,0	0/0:23,0:23:57.08:0,57,550	0/0:21,0:21:63.09:0,63,603	0/0:19,0:19:51.08:0,51,493	0/0:16,0:16:45.07:0,45,434	0/0:16,0:16:39.06:0,39,377	0/0:16,0:16:48.08:0,48,463	0/0:18,0:18:45.07:0,45,434	0/0:29,0:29:84.13:0,84,811	0/0:14,0:14:42.07:0,42,405	0/0:31,0:31:72.11:0,72,695	0/0:38,0:38:99:0,111,1058	0/0:13,0:13:33.04:0,33,313	0/0:19,0:19:57.09:0,57,550	0/0:28,0:28:81.13:0,81,782	0/0:21,0:21:54.08:0,54,521	1/1:1,18:19:48.15:580,48,0	0/0:24,0:24:69.11:0,69,666	0/0:28,0:28:69.09:0,69,666	0/0:10,0:10:21.03:0,21,203
chr10	88910620	.	ACGCG	A	6631.08	PASS	AB=0.987;AC=45;AF=0.804;AN=56;BaseQRankSum=3.443;DP=578;FS=5.511;HRun=0;HaplotypeScore=272.8020;InbreedingCoeff=0.6350;MQ=56.59;MQ0=2;MQRankSum=-3.520;QD=13.21;ReadPosRankSum=0.955;VQSLOD=3.4146;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:4.99:5,0,41	1/1:4,1:5:11.52:200,12,0	0/0:12,0:9:21.07:0,21,422	0/1:16,0:11:6.39:6,0,121	1/1:15,9:24:16.79:128,17,0	1/1:14,3:17:19.54:221,20,0	1/1:19,2:21:20.68:229,21,0	1/1:19,0:17:27.09:429,27,0	0/1:24,1:25:9.26:165,0,9	1/1:11,7:18:45.61:682,46,0	1/1:13,5:18:11.87:133,12,0	1/1:13,8:21:11.46:105,11,0	1/1:18,14:32:72.51:928,73,0	1/1:18,8:27:20.41:271,20,0	1/1:20,11:31:24.52:329,25,0	1/1:9,8:17:18.03:230,18,0	1/1:6,4:10:18.06:278,18,0	1/1:9,5:13:23.58:319,24,0	0/0:10,0:10:30.10:0,30,589	0/0:26,0:25:26.82:0,27,512	1/1:30,4:32:23.20:323,23,0	1/1:18,2:20:12.03:172,12,0	1/1:8,6:14:6.01:77,6,0	1/1:22,8:31:5.79:73,6,0	1/1:17,2:19:4.30:33,4,0	1/1:16,11:27:74.11:1033,74,0	0/0:28,0:27:62.72:0,63,1152	1/1:7,2:9:21:261,21,0
chr10	88910622	.	GCGCGCACA	G	6884.60	PASS	AB=0.941;AC=32;AF=0.571;AN=56;BaseQRankSum=4.520;DP=550;FS=3.695;HRun=0;HaplotypeScore=291.8192;InbreedingCoeff=-0.0155;MQ=54.55;MQ0=2;MQRankSum=-4.876;QD=15.03;ReadPosRankSum=0.927;VQSLOD=3.2964;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,6:29:24.73:136,0,25	0/1:5,0:5:3.27:160,0,3	0/0:11,0:8:21.07:0,21,698	0/0:15,0:10:21.15:0,21,261	0/1:23,0:24:33.38:69,0,33	0/1:16,0:17:40.92:167,0,41	1/1:14,0:18:21:253,21,0	0/1:17,0:15:86.59:242,0,87	1/1:15,8:24:27.64:611,28,0	0/1:18,0:18:79.72:602,0,80	0/1:17,0:17:33.10:81,0,33	0/1:18,0:21:55.19:154,0,55	0/1:31,0:31:10.48:980,0,10	0/1:18,0:25:30.46:184,0,30	0/1:30,0:30:20.11:169,0,20	1/1:16,0:16:18.02:255,18,0	1/1:8,0:8:15.94:253,16,0	0/1:14,0:13:11.68:306,0,12	0/0:10,0:10:30.10:0,30,759	0/0:28,0:27:28.62:0,29,782	0/1:32,0:30:12.62:228,0,13	0/1:14,0:19:16.20:89,0,16	1/1:12,0:12:6.87:85,7,0	1/1:29,0:29:5.70:53,6,0	1/1:12,6:18:36.09:437,36,0	1/1:27,0:27:41.10:1109,41,0	0/0:28,0:27:62.95:0,63,1778	1/1:7,0:7:18.46:262,18,0
chr10	88910630	.	ACACACACGCGCGCG	A	8928.35	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=5.811;DP=481;FS=8.816;HRun=0;HaplotypeScore=290.5265;InbreedingCoeff=0.6085;MQ=46.85;MQ0=5;MQRankSum=-3.908;QD=22.05;ReadPosRankSum=2.536;VQSLOD=2.0608;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:6.49:157,6,0	1/1:3,0:3:6.01:88,6,0	0/0:13,0:7:12.01:0,12,174	0/1:14,0:7:21.24:21,0,105	1/1:21,0:20:5.66:54,6,0	1/1:15,0:15:9.97:212,10,0	1/1:14,0:14:9.03:226,9,0	1/1:18,0:16:25.15:257,25,0	1/1:19,0:19:30.10:905,30,0	1/1:16,0:16:31.14:829,31,0	1/1:16,0:16:6.96:183,7,0	1/1:20,0:20:12.96:291,13,0	1/1:23,2:25:48.59:1314,49,0	1/1:24,0:24:17.99:341,18,0	1/1:26,0:26:3.93:59,4,0	1/1:14,1:15:9.03:281,9,0	1/1:6,0:6:11.63:381,12,0	1/1:14,0:13:15.52:392,16,0	0/0:11,0:10:14.95:0,15,183	0/0:28,0:27:16.36:0,16,383	1/1:20,1:19:3.96:9,4,0	1/1:17,0:16:0.45:1,0,0	1/1:9,1:10:3.86:75,4,0	1/1:25,0:25:0.99:2,1,0	1/1:17,0:17:30.10:754,30,0	1/1:23,1:24:63.83:1753,64,0	0/0:24,0:23:29.73:0,30,489	1/1:5,0:5:12.04:343,12,0
chr10	88910632	.	ACACACGCGCGCG	A	8640.66	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=5.770;DP=466;FS=6.736;HRun=0;HaplotypeScore=272.9023;InbreedingCoeff=0.6053;MQ=44.62;MQ0=5;MQRankSum=-2.724;QD=22.33;ReadPosRankSum=2.698;VQSLOD=2.6317;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:5.82:144,6,0	1/1:2,0:2:6.01:133,6,0	0/0:13,0:7:12.01:0,12,174	0/1:13,0:6:21.24:21,0,99	1/1:21,0:20:5.23:55,5,0	1/1:15,0:15:9.97:186,10,0	1/1:14,0:14:9.03:228,9,0	1/1:16,0:14:25.32:334,25,0	1/1:17,0:17:30.10:823,30,0	1/1:12,4:16:31.14:779,31,0	1/1:15,0:15:6.49:160,6,0	1/1:20,0:20:12.97:278,13,0	1/1:18,6:24:48.59:1270,49,0	1/1:21,1:22:17.97:333,18,0	1/1:19,5:24:3.95:59,4,0	1/1:12,2:14:9.02:270,9,0	1/1:7,0:7:11.80:322,12,0	1/1:10,3:12:15.52:385,16,0	0/0:13,0:12:20.08:0,20,156	0/0:29,0:28:16.46:0,16,318	1/1:17,2:17:3.47:8,3,0	1/1:17,0:16:0.47:1,0,0	1/1:10,1:10:3.83:75,4,0	1/1:23,2:25:0.99:2,1,0	1/1:16,0:16:30.10:719,30,0	1/1:16,7:23:59.19:1706,59,0	0/0:24,0:23:29.72:0,30,406	1/1:2,2:4:12.04:349,12,0
chr10	88910634	.	ACACGCGCGCG	A	8211.30	PASS	AB=0.969;AC=46;AF=0.821;AN=56;BaseQRankSum=5.961;DP=442;FS=7.378;HRun=0;HaplotypeScore=256.0156;InbreedingCoeff=0.5627;MQ=40.69;MQ0=5;MQRankSum=-3.399;QD=22.37;ReadPosRankSum=2.602;VQSLOD=2.6036;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,1:19:6.02:143,6,0	1/1:2,0:2:6.01:108,6,0	0/0:12,0:6:12.01:0,12,174	0/1:12,0:5:21.25:21,0,88	1/1:16,3:18:4.33:51,4,0	1/1:12,1:13:9.50:167,9,0	1/1:14,0:14:9.03:184,9,0	1/1:15,0:13:25.32:429,25,0	1/1:16,0:16:30.10:751,30,0	1/1:9,3:12:28.65:721,29,0	1/1:9,6:15:6.49:161,6,0	1/1:17,3:20:12.98:252,13,0	1/1:23,0:23:48.59:1140,49,0	1/1:21,0:21:18.01:343,18,0	1/1:24,0:24:3.95:58,4,0	1/1:14,0:14:9.03:258,9,0	1/1:3,3:6:11.80:355,12,0	1/1:13,0:12:15.52:324,16,0	0/0:11,0:10:3.15:0,3,77	0/0:29,0:28:16.23:0,16,249	1/1:17,0:15:3.49:8,3,0	0/1:14,1:14:0:0,0,0	1/1:11,0:10:3.89:75,4,0	1/1:24,0:24:0.99:2,1,0	1/1:16,0:16:30.10:716,30,0	1/1:22,0:22:60.49:1626,60,0	0/0:23,0:22:17.83:0,18,245	1/1:4,0:4:12.04:317,12,0
chr10	88910636	.	ACGCGCGCG	A	7667.92	PASS	AB=0.889;AC=47;AF=0.839;AN=56;BaseQRankSum=5.752;DP=432;FS=10.597;HRun=0;HaplotypeScore=244.9294;InbreedingCoeff=0.5050;MQ=40.24;MQ0=6;MQRankSum=-4.616;QD=20.61;ReadPosRankSum=2.113;VQSLOD=2.8597;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,4:17:6.02:143,6,0	1/1:2,1:3:6.01:110,6,0	0/0:8,1:5:12.01:0,12,174	0/1:10,0:5:21.27:21,0,77	1/1:8,13:19:3.72:51,4,0	1/1:5,8:13:9.48:145,9,0	1/1:7,7:14:9.03:180,9,0	1/1:5,6:12:24.08:548,24,0	1/1:11,5:16:30.10:652,30,0	1/1:10,1:12:28.65:621,29,0	1/1:11,5:16:6.49:149,6,0	1/1:9,10:19:12.49:181,12,0	1/1:9,13:22:48.11:1073,48,0	1/1:9,12:21:17.55:269,18,0	1/1:8,15:23:3.48:59,3,0	1/1:4,9:14:9.03:248,9,0	1/1:7,1:9:14.77:314,15,0	1/1:10,3:12:17.99:311,18,0	0/1:10,0:9:5.38:5,0,92	0/0:28,0:28:16.64:0,17,208	1/1:9,4:12:2.66:7,3,0	0/1:10,5:14:0:0,0,0	1/1:4,7:10:3.90:75,4,0	1/1:8,14:23:1.12:2,1,0	1/1:11,5:16:30.10:716,30,0	1/1:11,10:21:49.09:1487,49,0	0/0:21,0:20:25.69:0,26,291	1/1:2,2:4:12.04:300,12,0
chr10	88910638	.	GCGCGCGCA	G	5640.05	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=6.035;DP=470;FS=2.776;HRun=0;HaplotypeScore=258.9453;InbreedingCoeff=0.2942;MQ=35.80;MQ0=7;MQRankSum=-2.306;QD=13.72;ReadPosRankSum=1.529;VQSLOD=3.8336;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,6:17:6.34:109,6,0	1/1:3,0:3:3.01:67,3,0	0/0:9,0:4:9.01:0,9,92	0/1:10,0:4:8.65:9,0,68	1/1:21,0:19:2.76:27,3,0	1/1:11,0:11:8.04:89,8,0	1/1:11,0:11:9.02:128,9,0	1/1:14,0:10:22.32:375,22,0	1/1:12,8:20:33.58:667,34,0	1/1:10,0:10:27.05:444,27,0	1/1:19,0:19:5.23:104,5,0	1/1:16,0:16:11.62:117,12,0	1/1:31,0:31:42.65:784,43,0	1/1:21,0:21:12.50:175,12,0	1/1:25,0:25:3.01:41,3,0	1/1:15,0:15:9.03:193,9,0	1/1:10,0:10:8.81:224,9,0	1/1:18,0:17:1.75:207,2,0	0/1:12,0:11:39.98:40,0,52	0/0:27,0:26:12.74:0,13,86	1/1:26,0:23:2.66:8,3,0	0/1:13,0:12:0:1,0,0	1/1:11,0:10:3.90:52,4,0	1/1:31,0:31:0.64:2,1,0	1/1:10,6:16:30.10:533,30,0	0/1:24,0:24:11.99:1020,0,12	0/0:23,0:22:0.17:0,0,88	1/1:6,0:6:13.29:227,13,0
chr10	88910642	.	GCGCA	G	2515.36	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=1.714;DP=527;FS=0.000;HRun=0;HaplotypeScore=274.5623;InbreedingCoeff=0.0483;MQ=33.97;MQ0=9;MQRankSum=2.273;QD=4.77;ReadPosRankSum=3.617;VQSLOD=2.1297;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:5.84:39,6,0	1/1:3,0:3:2.99:23,3,0	1/1:9,0:2:2.04:6,2,0	0/1:11,0:4:12.22:12,0,12	0/1:25,0:23:0:1,0,0	1/1:13,0:13:5.67:37,6,0	1/1:19,0:19:1.87:20,2,0	1/1:15,0:10:11.11:100,11,0	1/1:23,0:23:29.43:321,29,0	1/1:9,0:9:19.29:146,19,0	1/1:22,0:22:1.51:18,2,0	1/1:23,0:23:11.37:69,11,0	1/1:31,0:31:4.59:184,5,0	0/1:29,0:29:8.49:37,0,8	1/1:26,0:26:2.94:18,3,0	1/1:18,0:18:8.44:62,8,0	0/1:10,0:10:4.92:74,0,5	0/1:19,0:18:26.11:68,0,26	1/1:4,11:13:29.78:329,30,0	1/1:3,20:24:11.57:173,12,0	1/1:31,0:28:2.66:7,3,0	0/1:16,0:15:0.01:0,0,0	0/1:12,0:11:0.03:0,0,0	0/1:38,0:37:0.21:1,0,0	1/1:15,0:15:26.61:169,27,0	0/1:26,0:26:41.14:338,0,41	1/1:0,19:20:17.95:308,18,0	1/1:6,0:6:8.91:68,9,0
chr10	88910663	.	CACACACACAGAA	C	2469.92	PASS	AB=0.992;AC=24;AF=0.429;AN=56;BaseQRankSum=7.903;DP=663;FS=7.099;HRun=0;HaplotypeScore=339.5275;InbreedingCoeff=0.2728;MQ=34.93;MQ0=22;MQRankSum=-4.163;QD=6.75;ReadPosRankSum=2.910;VQSLOD=1.1237;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:6.57:7,0,7	0/1:6,0:6:11.85:15,0,12	0/0:27,0:6:5.57:0,6,364	0/0:26,0:9:22.27:0,22,419	0/0:19,0:17:1.77:0,2,5	1/1:11,0:11:8.27:67,8,0	1/1:22,0:22:8.69:60,9,0	0/0:33,0:28:30.35:0,30,664	1/1:25,0:25:18.37:247,18,0	0/1:24,0:24:99:227,0,107	0/0:23,0:23:0.79:0,1,3	1/1:22,0:22:12.48:123,12,0	1/1:33,1:34:22.20:587,22,0	0/1:35,0:35:16.99:73,0,17	0/0:28,5:33:2.81:0,3,7	1/1:23,0:23:11.91:185,12,0	0/1:11,0:11:5.80:17,0,6	0/1:26,1:26:77.81:181,0,78	0/0:23,0:18:29.12:0,29,828	0/0:25,0:24:6.09:0,6,303	0/0:36,0:33:0.89:0,1,2	0/0:16,0:15:1.77:0,2,5	0/0:16,0:15:0.06:0,0,2	0/1:43,0:41:0.32:0,0,0	1/1:16,0:16:9:21,9,0	0/1:36,1:37:99:713,0,392	0/0:20,0:17:6.63:0,7,308	1/1:6,0:5:3.20:110,3,0
chr10	88910665	.	CACACACAGAA	C	2662.10	PASS	AB=0.996;AC=29;AF=0.518;AN=56;BaseQRankSum=5.944;DP=658;FS=7.095;HRun=0;HaplotypeScore=326.3603;InbreedingCoeff=0.1386;MQ=35.09;MQ0=22;MQRankSum=-1.804;QD=6.18;ReadPosRankSum=3.645;VQSLOD=1.2374;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:4.76:5,0,7	0/1:6,0:6:10.87:29,0,11	0/0:30,0:9:14.60:0,15,461	0/0:25,0:8:22.24:0,22,390	0/0:19,0:17:2.66:0,3,7	1/1:11,0:11:7.09:101,7,0	1/1:22,0:22:8.38:72,8,0	0/0:33,0:28:25.86:0,26,461	1/1:25,0:25:15.89:205,16,0	0/1:26,0:26:88.02:248,0,88	0/0:23,0:23:1.77:0,2,5	1/1:22,0:22:13.01:169,13,0	1/1:29,4:33:14.83:513,15,0	1/1:35,0:35:10.71:107,11,0	0/0:30,1:31:2.42:0,2,6	1/1:19,4:23:11.91:159,12,0	0/1:11,0:11:9.20:9,0,25	0/1:26,1:26:27.22:189,0,27	0/1:22,0:17:24.68:25,0,522	0/1:24,0:23:35.09:35,0,218	0/0:35,0:32:0.89:0,1,2	0/0:16,0:15:1.77:0,2,5	0/0:11,4:14:0.32:0,0,2	1/1:37,5:40:2.46:19,2,0	1/1:16,0:16:4.49:8,4,0	0/1:35,0:35:99:689,0,248	0/1:21,0:18:99:144,0,216	1/1:6,0:5:4.71:98,5,0
chr10	88910669	.	CACAGAA	C	2239.51	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=4.059;DP=668;FS=1.843;HRun=0;HaplotypeScore=306.0521;InbreedingCoeff=0.3995;MQ=35.46;MQ0=22;MQRankSum=-3.515;QD=5.73;ReadPosRankSum=4.969;VQSLOD=1.5857;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:4.05:4,0,9	0/1:6,0:6:14.17:18,0,14	0/0:33,0:11:17.44:0,17,477	0/0:28,0:11:23.19:0,23,397	0/0:19,0:17:2.66:0,3,7	1/1:11,0:11:6.32:64,6,0	1/1:19,3:22:8.51:74,9,0	0/1:34,0:30:31.54:32,0,137	1/1:24,0:24:1.42:61,1,0	0/1:25,0:25:42.34:252,0,42	0/0:21,0:21:1.77:0,2,5	1/1:22,0:22:12.18:194,12,0	1/1:34,0:34:49.79:491,50,0	1/1:34,1:35:14.61:156,15,0	0/0:30,0:30:2.58:0,3,7	1/1:22,0:22:11.22:95,11,0	0/0:10,0:11:5.84:0,6,40	1/1:29,0:28:22.49:232,22,0	0/0:22,0:17:18:0,18,532	0/0:23,0:22:20.91:0,21,223	0/0:35,0:32:0.89:0,1,2	0/0:16,0:15:1.77:0,2,4	0/0:15,0:14:0.95:0,1,4	1/1:44,0:42:1.61:5,2,0	0/1:16,0:16:0.02:0,0,0	0/1:35,0:35:6.69:633,0,7	0/0:24,0:21:13.90:0,14,348	1/1:7,0:6:8.92:96,9,0
chr10	88910671	.	CAGAA	C	1968.79	PASS	AB=0.985;AC=26;AF=0.464;AN=56;BaseQRankSum=2.055;DP=673;FS=0.000;HRun=0;HaplotypeScore=298.2466;InbreedingCoeff=0.2497;MQ=35.67;MQ0=22;MQRankSum=-3.470;QD=4.85;ReadPosRankSum=4.907;VQSLOD=1.6771;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:3.71:4,0,10	0/1:6,0:6:14.95:17,0,15	0/0:33,0:11:17.36:0,17,460	0/0:29,0:11:25.77:0,26,414	0/0:15,4:17:2.66:0,3,7	1/1:8,3:11:3.81:21,4,0	1/1:19,3:22:0.14:32,0,0	0/1:37,0:33:56.48:56,0,107	0/1:24,0:24:33.71:46,0,34	0/1:25,0:25:45.50:296,0,45	0/0:21,0:21:2.70:0,3,8	1/1:16,6:22:12.14:175,12,0	1/1:32,0:34:44.18:326,44,0	1/1:27,7:35:15.70:156,16,0	0/0:30,0:31:2.58:0,3,7	1/1:19,2:22:8.12:55,8,0	0/1:11,0:11:13.34:13,0,13	1/1:27,0:28:8.35:201,8,0	0/0:22,0:17:8.25:0,8,466	0/0:23,0:22:22.55:0,23,217	0/0:30,1:32:0.89:0,1,2	0/0:12,4:15:1.77:0,2,4	0/0:12,2:13:2.19:0,2,6	0/1:42,1:42:0.01:0,0,1	1/1:16,0:16:3.09:11,3,0	0/1:33,1:36:13.87:670,0,14	0/0:24,0:21:25.93:0,26,413	1/1:7,0:6:7.80:55,8,0
chr10	88910673	.	GAAAC	G	836.79	PASS	AB=0.923;AC=22;AF=0.393;AN=56;BaseQRankSum=5.017;DP=675;FS=13.854;HRun=0;HaplotypeScore=302.5479;InbreedingCoeff=0.2284;MQ=35.87;MQ0=21;MQRankSum=-4.912;QD=2.29;ReadPosRankSum=5.043;VQSLOD=0.9392;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,11:25:9.40:21,0,9	0/0:5,0:5:1.42:0,1,18	0/0:34,0:11:15.64:0,16,676	0/0:29,0:11:15.86:0,16,556	0/0:12,7:17:2.66:0,3,7	1/1:8,3:11:3.04:11,3,0	1/1:22,0:22:4.85:25,5,0	0/0:35,0:32:57.55:0,58,598	0/1:13,11:24:15.22:138,0,15	0/1:25,0:25:31.17:31,0,181	0/0:20,0:21:2.70:0,3,8	1/1:15,8:23:11.71:123,12,0	0/1:34,0:34:12.22:113,0,12	1/1:24,10:35:13.18:96,13,0	0/0:31,0:31:2.58:0,3,7	1/1:22,0:22:10.37:55,10,0	0/1:12,0:12:5.66:6,0,45	0/1:30,0:29:56.70:58,0,57	0/0:23,0:18:40.37:0,40,849	0/0:22,0:21:23.03:0,23,310	0/0:35,0:32:0.89:0,1,2	0/0:15,2:16:1.77:0,2,4	0/0:14,0:13:2.19:0,2,6	0/1:43,0:41:0.01:0,0,1	1/1:10,6:16:2.63:11,3,0	0/1:36,0:36:99:290,0,106	0/0:25,0:22:47.14:0,47,832	1/1:7,0:6:5.96:20,6,0
chr10	88910683	.	CAGAGACAG	C	3230.05	PASS	AB=0.960;AC=33;AF=0.589;AN=56;BaseQRankSum=-0.088;DP=698;FS=0.514;HRun=0;HaplotypeScore=298.3172;InbreedingCoeff=0.1717;MQ=39.44;MQ0=13;MQRankSum=-0.714;QD=5.50;ReadPosRankSum=-0.197;VQSLOD=2.0266;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:13.23:13,0,28	0/1:1,4:5:5.90:132,0,6	0/0:30,0:11:29.84:0,30,718	0/0:26,0:10:22.64:0,23,666	0/1:22,0:22:0:0,0,0	1/1:16,0:16:3.37:24,3,0	1/1:27,0:27:6.33:36,6,0	1/1:6,26:30:65.66:1236,66,0	0/1:24,0:24:36.96:37,0,59	1/1:10,12:22:25.83:1281,26,0	1/1:10,10:20:9.97:176,10,0	1/1:28,0:28:9.19:67,9,0	0/1:35,0:36:16.69:17,0,96	0/1:41,0:42:5.56:32,0,6	0/1:34,0:34:0:0,0,0	0/1:20,0:20:0.36:0,0,16	1/1:7,4:11:10.23:102,10,0	0/0:33,0:33:14.29:0,14,172	0/1:20,0:17:11.90:12,0,849	0/1:23,0:23:3.72:4,0,342	1/1:40,0:37:1.25:3,1,0	0/1:21,0:21:0:0,0,0	1/1:16,0:16:0.88:3,1,0	1/1:49,0:48:2.39:16,2,0	0/0:13,0:13:10.08:0,10,40	0/1:30,1:31:99:192,0,343	0/1:25,0:23:3.10:3,0,1029	0/0:8,0:7:5.22:0,5,66
chr10	88910687	.	GAC	G	1405.78	PASS	AB=1.000;AC=27;AF=0.500;AN=54;BaseQRankSum=0.826;DP=699;FS=5.620;HRun=0;HaplotypeScore=262.4957;InbreedingCoeff=0.4039;MQ=41.04;MQ0=12;MQRankSum=-0.380;QD=3.31;ReadPosRankSum=-2.424;VQSLOD=1.7005;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:31.79:0,32,239	1/1:5,0:5:5.45:37,5,0	0/0:32,0:12:22.94:0,23,450	0/0:26,0:10:25.96:0,26,416	0/1:24,0:24:0.33:0,0,0	1/1:19,0:19:2.95:31,3,0	1/1:26,0:26:2.73:19,3,0	1/1:29,0:28:69.09:730,69,0	0/0:22,0:22:6.07:0,6,206	1/1:18,4:22:30.69:371,31,0	1/1:15,4:19:8.93:64,9,0	1/1:27,0:27:1.71:79,2,0	0/0:40,0:40:9.02:0,9,249	1/1:41,0:41:13.46:77,13,0	0/1:35,0:35:0.01:0,0,0	0/1:22,0:22:0.71:1,0,15	1/1:8,1:9:9.33:53,9,0	0/0:32,0:31:24.10:0,24,159	0/1:22,0:18:45.82:46,0,142	0/1:23,0:23:19.89:20,0,38	0/0:37,0:35:3.01:0,3,36	./.	0/1:17,0:17:0.03:0,0,0	0/1:47,0:46:0.27:0,0,0	0/0:8,0:10:26.28:0,26,156	0/0:29,0:29:23.30:0,23,457	0/1:26,0:24:32.67:33,0,125	0/1:12,0:11:9.26:9,0,29
chr10	88910689	.	CAGAGAG	C	2904.76	PASS	AB=0.838;AC=40;AF=0.714;AN=56;BaseQRankSum=7.561;DP=670;FS=6.392;HRun=0;HaplotypeScore=254.6911;InbreedingCoeff=0.5285;MQ=41.80;MQ0=10;MQRankSum=-6.365;QD=5.37;ReadPosRankSum=0.168;VQSLOD=1.5106;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:30.79:194,31,0	0/1:5,0:5:12.10:41,0,12	0/0:32,0:13:36.84:0,37,335	0/0:28,0:11:24.48:0,24,269	1/1:22,0:22:0.35:0,0,0	1/1:18,0:18:3.31:16,3,0	1/1:24,0:24:1.09:2,1,0	0/1:28,0:27:14.09:189,0,14	1/1:19,0:19:38.26:222,38,0	1/1:19,0:21:29.83:474,30,0	1/1:16,0:18:8.71:38,9,0	1/1:28,0:28:11.51:84,12,0	1/1:12,28:40:37.48:484,37,0	1/1:38,0:38:10.75:49,11,0	0/1:7,26:33:0.07:0,0,0	1/1:8,12:20:4.66:22,5,0	0/1:7,0:8:2.80:3,0,19	1/1:6,24:29:10.86:184,11,0	0/0:21,0:17:26.31:0,26,705	0/0:22,0:22:18.48:0,18,297	1/1:12,23:34:3.01:44,3,0	0/1:16,0:16:0:0,0,0	1/1:7,9:16:0.89:3,1,0	0/1:13,33:46:0.86:1,0,20	1/1:9,0:9:26.42:157,26,0	1/1:12,16:28:63.53:790,64,0	0/0:26,0:24:32.06:0,32,939	1/1:2,10:11:8.26:77,8,0
chr10	88910691	.	GAGAGAGAGAGACAGAGAC	G	634.13	PASS	AB=0.792;AC=18;AF=0.321;AN=56;BaseQRankSum=4.035;DP=670;FS=0.937;HRun=0;HaplotypeScore=317.9093;InbreedingCoeff=0.5671;MQ=41.96;MQ0=9;MQRankSum=-6.207;QD=2.22;ReadPosRankSum=-4.591;VQSLOD=0.8295;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:24.75:0,25,373	0/0:5,0:5:9:0,9,166	0/0:32,0:14:39.93:0,40,947	0/0:30,0:13:30.02:0,30,778	0/1:8,11:19:0.19:0,0,0	1/1:3,16:19:5.47:68,5,0	1/1:8,16:24:0.21:1,0,0	0/0:29,0:28:45.01:0,45,1175	0/0:21,0:21:43.54:0,44,472	0/0:21,0:21:55.99:0,56,1277	0/0:18,0:18:8.35:0,8,209	1/1:10,17:27:12.80:358,13,0	0/0:40,0:40:34.48:0,34,736	1/1:12,24:36:11.67:301,12,0	1/1:33,0:33:0.82:2,1,0	1/1:19,0:19:3.30:19,3,0	0/0:9,0:9:10.27:0,10,220	0/1:29,0:28:2.13:2,0,215	0/0:22,0:18:45.12:0,45,2024	0/0:22,0:22:17.18:0,17,884	0/0:34,0:33:3.01:0,3,66	0/1:2,14:16:0:0,0,0	1/1:16,0:16:0.88:3,1,0	0/1:47,0:47:21.30:21,0,126	0/0:9,0:9:27.08:0,27,321	0/0:27,0:27:44.60:0,45,1179	0/0:25,0:23:51.17:0,51,2707	0/0:12,0:11:8.76:0,9,235
chr10	88910697	.	GAGAGAC	G	2047.58	PASS	AB=1.000;AC=31;AF=0.574;AN=54;BaseQRankSum=5.357;DP=643;FS=15.501;HRun=0;HaplotypeScore=228.7286;InbreedingCoeff=0.5079;MQ=43.03;MQ0=6;MQRankSum=-6.555;QD=5.22;ReadPosRankSum=1.722;VQSLOD=1.4019;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,7:30:33.81:391,34,0	1/1:5,0:5:0.25:15,0,0	0/0:26,0:14:14.58:0,15,159	0/0:34,0:13:6.94:0,7,98	1/1:17,0:17:0.35:0,0,0	1/1:18,0:18:0.47:1,0,0	1/1:23,0:23:0.94:1,1,0	0/0:31,0:30:22.65:0,23,339	1/1:15,7:22:45.92:524,46,0	0/1:21,0:21:46.33:149,0,46	0/0:18,0:18:4.24:0,4,12	1/1:24,0:24:2.79:32,3,0	1/1:36,0:36:31.48:286,31,0	0/1:32,0:32:7.10:7,0,11	0/1:32,0:32:0.07:0,0,0	./.	0/0:8,0:8:8.10:0,8,60	1/1:28,0:27:5.54:85,6,0	0/0:20,0:17:42.13:0,42,1055	0/0:20,0:20:17.59:0,18,427	1/1:31,0:30:2.98:21,3,0	0/1:16,0:16:0:0,0,0	1/1:15,0:15:0.89:3,1,0	0/0:50,0:49:11.09:0,11,133	1/1:4,6:10:27.08:325,27,0	1/1:21,0:21:4.37:328,4,0	0/0:25,0:23:54.08:0,54,1355	0/1:11,0:10:0.37:39,0,0
chr10	88910707	.	GAC	G	70.56	PASS	AB=0.967;AC=8;AF=0.148;AN=54;BaseQRankSum=3.546;DP=654;FS=0.000;HRun=0;HaplotypeScore=201.5478;InbreedingCoeff=0.5206;MQ=47.81;MQ0=8;MQRankSum=-2.997;QD=0.67;ReadPosRankSum=-0.114;VQSLOD=2.5186;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,1:35:37.31:0,37,261	0/0:4,0:4:5.80:0,6,39	0/0:30,0:13:28.20:0,28,433	0/0:36,0:15:9.72:0,10,345	0/1:13,0:13:0.33:0,0,0	0/1:17,0:17:0:0,0,0	0/1:17,3:20:0:1,0,0	0/0:30,0:29:74.93:0,75,921	0/0:21,0:21:54.35:0,54,361	0/0:19,0:19:51.61:0,52,583	0/0:15,0:15:8.32:0,8,38	1/1:20,0:20:4.73:21,5,0	0/0:40,0:40:49.73:0,50,442	1/1:26,1:27:11.69:146,12,0	0/0:36,0:36:12.01:0,12,197	0/0:20,0:20:6:0,6,82	0/1:9,0:9:11.69:12,0,68	0/0:31,0:30:6.51:0,7,161	0/0:25,0:20:59.40:0,59,962	0/0:18,0:18:27.07:0,27,457	0/0:33,0:32:15.02:0,15,203	./.	0/0:14,0:14:2.77:0,3,24	0/0:48,1:48:16.20:0,16,260	0/0:10,0:10:26.51:0,27,169	0/0:24,0:24:68.73:0,69,829	0/0:30,0:28:72.21:0,72,1288	0/0:14,0:13:17.87:0,18,188
chr10	88910753	.	G	GAC	149.32	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=6.132;DP=733;FS=1.987;HRun=0;HaplotypeScore=158.8323;InbreedingCoeff=0.8182;MQ=59.33;MQ0=14;MQRankSum=-3.002;QD=8.78;ReadPosRankSum=-2.396;VQSLOD=3.0800;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:65.13:0,65,894	./.	0/0:41,0:17:14.85:0,15,262	0/0:66,0:20:33.40:0,33,399	0/0:17,0:17:27.09:0,27,381	0/0:22,0:22:21.02:0,21,277	0/0:25,0:25:51.12:0,51,655	0/0:38,0:38:99:0,105,1364	0/0:23,0:23:51.13:0,51,710	1/1:13,0:13:29.63:213,30,0	./.	0/0:32,0:32:51.10:0,51,695	0/0:38,0:38:63.14:0,63,874	0/0:28,0:28:27.09:0,27,384	0/0:33,0:33:39.13:0,39,557	0/0:23,0:23:51.16:0,51,711	1/1:1,3:4:5.50:46,6,0	0/0:29,1:30:1.04:0,1,400	0/0:22,0:20:57.09:0,57,696	0/0:11,0:11:30.10:0,30,429	0/0:41,0:39:71.91:0,72,979	0/0:23,0:22:36.12:0,36,513	0/0:13,0:13:27.04:0,27,330	0/0:52,0:52:37.81:0,38,664	0/0:16,0:15:24.06:0,24,343	0/0:28,0:28:60.94:0,61,967	0/0:31,0:30:84.26:0,84,1168	0/0:19,0:19:36.02:0,36,433
chr10	88910759	.	G	GGC	67.47	PASS	AB=1.000;AC=3;AF=0.058;AN=52;BaseQRankSum=6.327;DP=730;FS=2.447;HRun=0;HaplotypeScore=169.0034;InbreedingCoeff=0.4807;MQ=60.61;MQ0=12;MQRankSum=-3.170;QD=5.19;ReadPosRankSum=-3.231;VQSLOD=2.5505;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:68.24:0,68,1097	./.	0/0:38,0:17:17.79:0,18,346	0/0:61,0:22:39.87:0,40,574	0/0:19,0:19:34.62:0,35,574	0/0:22,0:22:29.33:0,29,471	0/0:25,0:25:54.18:0,54,880	0/0:40,0:40:99:0,111,1709	0/0:23,0:23:54.16:0,54,863	0/1:10,0:10:46.71:113,0,47	./.	0/0:29,0:29:48.15:0,48,781	0/0:39,0:39:63.21:0,63,1012	0/0:27,0:27:27.09:0,27,440	0/0:33,0:33:42.14:0,42,669	0/0:24,0:24:54.18:0,54,870	1/1:0,3:3:3.90:46,4,0	0/0:28,1:29:12.15:0,12,560	0/0:24,0:21:60.20:0,60,959	0/0:12,0:12:36.12:0,36,585	0/0:45,0:43:83.96:0,84,1324	0/0:24,0:23:41.53:0,42,657	0/0:12,0:12:30.10:0,30,486	0/0:55,0:55:52.66:0,53,1010	0/0:16,0:16:24.06:0,24,391	0/0:28,0:28:78.72:0,79,1246	0/0:31,0:30:87.30:0,87,1400	0/0:18,0:18:33.11:0,33,538
chr10	88910786	.	AAG	A	124.24	PASS	AB=0.829;AC=6;AF=0.115;AN=52;BaseQRankSum=5.940;DP=686;FS=0.000;HRun=0;HaplotypeScore=152.6555;InbreedingCoeff=0.5193;MQ=67.82;MQ0=6;MQRankSum=-3.671;QD=1.80;ReadPosRankSum=-3.908;VQSLOD=1.2758;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,12:39:74.74:75,0,962	./.	0/0:38,0:21:49.29:0,49,758	0/0:52,0:35:59.80:0,60,965	0/0:21,0:21:60.20:0,60,1193	0/0:20,0:20:42.14:0,42,809	0/0:25,0:25:66.18:0,66,1252	0/0:40,0:39:99:0,111,2229	0/1:22,3:25:44.28:44,0,886	1/1:0,2:2:5.91:48,6,0	1/1:0,3:3:6.90:77,7,0	0/0:31,0:31:72.16:0,72,1286	0/0:35,0:35:90.26:0,90,1692	0/0:24,0:24:48.16:0,48,805	0/0:27,0:27:72.20:0,72,1220	0/0:25,0:25:66.22:0,66,1292	./.	0/0:29,0:29:72.72:0,73,1443	0/0:25,0:23:66.23:0,66,1334	0/0:12,0:12:36.12:0,36,731	0/0:45,0:45:94.41:0,94,1988	0/0:20,0:20:48.16:0,48,964	0/0:17,0:17:48.16:0,48,965	0/0:51,1:52:72:0,72,1531	0/0:9,3:12:11.90:0,12,292	0/0:29,0:29:87.30:0,87,1749	0/0:23,0:23:69.22:0,69,1357	0/0:15,0:15:33.11:0,33,671
chr10	88910807	.	CACAG	C	438.65	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=5.652;DP=718;FS=6.634;HRun=0;HaplotypeScore=172.2726;InbreedingCoeff=0.8011;MQ=60.21;MQ0=12;MQRankSum=-0.528;QD=6.27;ReadPosRankSum=-3.261;VQSLOD=1.7456;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:51.07:0,51,1255	1/1:1,0:1:3.01:60,3,0	0/0:31,0:11:12.81:0,13,238	0/1:54,0:28:0.40:0,0,505	0/0:22,0:22:60.20:0,60,1640	0/0:19,0:19:54.19:0,54,1396	0/0:25,0:25:57.19:0,57,1513	0/0:57,0:56:99:0,159,3696	0/0:23,0:23:39.12:0,39,1002	1/1:0,7:7:21.07:387,21,0	1/1:0,7:7:7.38:115,7,0	0/0:30,0:30:78.27:0,78,2100	0/0:30,0:30:78.25:0,78,2094	0/0:23,0:23:57.20:0,57,1560	0/0:31,0:31:72.22:0,72,1880	0/0:31,0:31:69.19:0,69,1729	./.	0/0:25,0:25:69.69:0,70,1769	0/0:33,0:29:81.22:0,81,1817	0/0:9,0:9:27.08:0,27,693	0/0:42,1:43:87.52:0,88,2931	0/0:24,0:24:69.24:0,69,1794	0/0:17,0:17:51.18:0,51,1409	0/0:53,0:53:59.81:0,60,2150	0/0:15,0:15:26.93:0,27,632	0/0:30,0:30:33.27:0,33,2107	0/0:24,0:24:72.25:0,72,1952	0/0:13,0:13:39.05:0,39,898
chr10	88911796	.	TGACA	T	5164.73	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=13.079;DP=837;FS=1.861;HRun=0;HaplotypeScore=135.5869;InbreedingCoeff=1.0000;MQ=88.83;MQ0=0;MQRankSum=-5.453;QD=50.63;ReadPosRankSum=3.378;VQSLOD=5.9758;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,42:44:99:2229,114,0	0/0:17,0:17:48.16:0,48,1330	0/0:30,0:30:69.71:0,70,2202	0/0:36,0:34:84.29:0,84,2083	0/0:35,0:35:99:0,105,2864	0/0:31,0:30:93.32:0,93,2602	0/0:27,0:27:81.28:0,81,2267	0/0:24,0:24:69.23:0,69,1839	1/1:1,31:32:81.28:1617,81,0	0/0:31,0:31:90.31:0,90,2514	0/0:24,0:24:72.23:0,72,1952	0/0:27,0:27:81.26:0,81,2169	0/0:41,0:41:99:0,123,3360	0/0:35,0:35:99:0,105,2801	0/0:29,0:29:87.30:0,87,2415	0/0:35,0:35:99:0,105,2818	0/0:30,0:30:90.31:0,90,2509	0/0:15,0:15:42.14:0,42,1151	0/0:33,0:33:96.33:0,96,2658	0/0:28,0:28:84.29:0,84,2311	0/0:27,0:27:78.27:0,78,2183	0/0:30,0:30:90.31:0,90,2504	0/0:22,0:22:66.23:0,66,1847	0/0:37,0:37:99:0,105,2859	1/1:1,25:26:66.23:1318,66,0	0/0:38,0:38:99:0,114,3129	0/0:39,0:38:99:0,114,3127	0/0:14,0:14:42.14:0,42,1146
chr10	88911870	.	AG	A	30.74	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.214;DP=704;FS=0.000;HRun=1;HaplotypeScore=103.1460;InbreedingCoeff=0.8662;MQ=81.37;MQ0=0;MQRankSum=-3.620;QD=4.39;ReadPosRankSum=1.522;VQSLOD=0.2659;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:6:51,6,0	0/0:11,0:11:33.11:0,33,528	0/0:21,0:21:63.21:0,63,976	0/0:19,0:18:51.17:0,51,806	0/0:27,0:27:81.26:0,81,1270	0/0:24,0:24:72.25:0,72,1148	0/0:33,0:33:99:0,99,1555	0/0:35,0:35:99:0,102,1540	1/1:1,1:2:3:25,3,0	0/0:33,0:33:99:0,99,1492	0/0:14,0:14:42.13:0,42,637	0/0:28,0:28:84.27:0,84,1318	0/0:34,0:34:99:0,102,1592	0/0:32,0:32:96.33:0,96,1532	0/0:38,0:38:99:0,114,1814	0/0:31,0:31:90.29:0,90,1406	0/0:27,0:27:81.28:0,81,1286	0/0:19,0:19:57.19:0,57,911	0/0:34,0:34:99:0,102,1523	0/0:19,0:19:54.18:0,54,863	0/0:36,0:36:99:0,108,1721	0/0:27,0:27:81.28:0,81,1293	0/0:31,0:31:93.32:0,93,1482	0/0:37,0:37:99:0,108,1645	1/1:0,3:3:8.98:71,9,0	0/0:45,0:45:99:0,135,2133	0/0:30,0:30:90.29:0,90,1412	0/0:12,0:12:36.12:0,36,575
chr10	88911873	.	ACGCAGTGCTCTCCTACACCCCATTGCCCGACCCTCCTCACTACAAG	A	1540.01	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=3.855;DP=698;FS=0.000;HRun=0;HaplotypeScore=768.6706;InbreedingCoeff=0.9092;MQ=80.52;MQ0=0;MQRankSum=-3.827;QD=308.00;ReadPosRankSum=2.305;VQSLOD=0.7828;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:6.02:646,6,0	0/0:11,0:11:33.11:0,33,4680	0/0:19,0:19:57.20:0,57,4227	0/0:17,0:16:48.16:0,48,2993	0/0:26,0:26:78.25:0,78,11241	0/0:25,0:25:75.26:0,75,10576	0/0:35,0:35:99:0,102,11522	0/0:34,0:34:90.31:0,90,7354	./.	0/0:33,0:33:96.33:0,96,13658	0/0:13,0:13:36.11:0,36,5023	0/0:30,0:30:90.27:0,90,13028	0/0:34,0:34:99:0,99,15167	0/0:32,0:32:96.33:0,96,14800	0/0:38,0:38:99:0,111,17745	0/0:28,0:28:78.27:0,78,11938	0/0:27,0:27:75.26:0,75,11726	0/0:21,0:21:63.22:0,63,10251	0/0:33,0:33:96.33:0,96,12237	0/0:20,0:20:54.19:0,54,7920	0/0:39,0:39:99:0,108,15720	0/0:28,0:28:84.27:0,84,11561	0/0:31,0:31:93.32:0,93,14549	0/0:33,0:33:96.33:0,96,13636	1/1:0,3:3:9.03:996,9,0	0/0:44,0:44:99:0,129,18453	0/0:29,0:29:84.29:0,84,11771	0/0:12,0:12:36.12:0,36,6015
chr10	88913026	.	TG	T	1849.40	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.840;DP=599;FS=3.018;HRun=5;HaplotypeScore=63.1763;InbreedingCoeff=0.9901;MQ=90.41;MQ0=0;MQRankSum=-1.037;QD=28.45;ReadPosRankSum=0.577;VQSLOD=4.0674;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.20:0,72,964	1/1:0,4:4:12.03:136,12,0	0/0:23,0:22:46.48:0,46,643	0/0:39,1:38:84.08:0,84,1095	0/0:31,0:31:90.30:0,90,1230	0/0:21,0:21:60.20:0,60,821	0/0:21,0:21:60.16:0,60,799	0/0:23,0:23:60.18:0,60,792	0/0:19,0:19:54.17:0,54,724	1/1:2,22:24:63.18:714,63,0	1/1:0,10:10:30.09:340,30,0	0/0:17,0:17:51.16:0,51,682	0/0:21,0:21:63.21:0,63,862	0/0:21,0:21:54.18:0,54,738	0/0:24,0:24:66.20:0,66,871	0/0:21,0:21:60.20:0,60,821	1/1:0,27:27:72.20:817,72,0	0/0:16,0:16:48.16:0,48,656	0/0:18,0:18:54.18:0,54,738	0/0:21,0:21:57.08:0,57,709	0/0:20,0:20:60.20:0,60,821	0/0:22,0:22:66.21:0,66,888	0/0:16,0:16:45.14:0,45,599	0/0:32,0:32:84.28:0,84,1149	0/0:22,0:22:57.17:0,57,761	0/0:19,0:19:51.15:0,51,668	0/0:34,0:34:93.31:0,93,1270	0/0:7,0:7:21.07:0,21,287
chr10	88913390	.	C	CGG	1235.63	PASS	AB=0.929;AC=32;AF=0.640;AN=50;BaseQRankSum=-4.177;DP=314;FS=12.463;HRun=7;HaplotypeScore=66.9241;InbreedingCoeff=0.7137;MQ=83.37;MQ0=0;MQRankSum=-2.693;QD=8.41;ReadPosRankSum=-0.820;VQSLOD=-0.3908;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:48.89:0,49,151	1/1:0,0:3:3:29,3,0	0/0:14,0:14:28.68:0,29,329	0/0:19,0:18:10.09:0,10,182	1/1:3,0:14:21.21:74,21,0	1/1:1,0:8:12.48:44,12,0	1/1:2,0:11:17.47:61,17,0	0/1:21,0:21:21.46:21,0,66	0/0:23,0:23:8.44:0,8,59	0/1:5,0:6:0:0,0,0	./.	1/1:3,0:12:20.46:87,20,0	1/1:1,0:1:1.25:3,1,0	1/1:1,0:14:24.95:89,25,0	1/1:1,11:13:27.09:442,27,0	1/1:4,2:6:10.58:129,11,0	1/1:4,0:12:6.01:58,6,0	1/1:2,3:5:12.02:159,12,0	0/0:14,0:14:33.09:0,33,384	0/0:8,0:8:24.07:0,24,279	./.	1/1:4,0:12:14.85:53,15,0	./.	1/1:2,0:2:5.84:40,6,0	0/0:24,0:26:13.10:0,13,69	1/1:5,1:6:7.26:79,7,0	0/0:13,0:13:36.09:0,36,406	1/1:0,1:1:3.01:49,3,0
chr10	88913396	.	G	GT	4189.12	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=-5.972;DP=323;FS=19.041;HRun=0;HaplotypeScore=50.4497;InbreedingCoeff=0.3791;MQ=90.86;MQ0=0;MQRankSum=-1.725;QD=23.14;ReadPosRankSum=5.632;VQSLOD=2.7636;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:39:90.30:1341,90,0	0/0:2,0:2:2.37:0,2,8	0/0:15,0:15:34.45:0,34,412	0/0:22,0:21:21.55:0,22,338	0/1:12,0:12:21.76:83,0,22	1/1:8,0:8:13.15:59,13,0	0/1:13,0:13:40.70:41,0,75	1/1:1,22:23:66.13:868,66,0	1/1:2,22:24:51.15:735,51,0	0/0:5,0:5:5.90:0,6,37	0/0:3,0:3:0.89:0,1,2	0/1:12,0:12:26.75:44,0,27	0/0:1,0:1:2.92:0,3,17	0/1:15,0:15:20.91:69,0,21	0/0:12,0:12:22.75:0,23,114	0/0:7,0:7:20.68:0,21,153	0/0:9,0:9:11.59:0,12,69	0/0:5,0:5:3.16:0,3,47	0/0:18,0:18:51.05:0,51,609	0/0:9,0:9:24.08:0,24,334	./.	0/1:10,0:10:31.61:63,0,32	0/0:5,0:5:3:0,3,27	0/0:6,0:6:11.99:0,12,102	1/1:3,21:25:63.19:887,63,0	0/0:4,0:4:8.85:0,9,63	0/0:13,0:13:39.12:0,39,527	0/0:1,0:1:2.84:0,3,14
chr10	88916973	.	TC	T	16220.42	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=12.576;DP=522;FS=2.904;HRun=1;HaplotypeScore=144.9362;InbreedingCoeff=0.9979;MQ=86.81;MQ0=0;MQRankSum=-7.718;QD=39.47;ReadPosRankSum=5.691;VQSLOD=4.1727;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:54.18:755,54,0	1/1:0,7:7:21.07:293,21,0	0/0:28,0:28:84.28:0,84,1279	0/0:26,0:26:75.24:0,75,1139	1/1:0,21:21:60.20:839,60,0	1/1:0,17:17:48.16:671,48,0	1/1:0,18:18:48.16:671,48,0	1/1:0,21:21:63.21:879,63,0	1/1:1,17:18:54.13:732,54,0	1/1:0,16:16:42.14:587,42,0	1/1:1,16:17:51.16:695,51,0	1/1:0,19:19:54.18:754,54,0	1/1:0,27:27:72.24:1007,72,0	1/1:0,20:20:54.18:754,54,0	1/1:0,18:18:54.18:755,54,0	1/1:0,14:14:39.13:545,39,0	1/1:0,13:13:36.12:501,36,0	1/1:0,16:16:48.16:671,48,0	0/0:10,0:10:30.10:0,30,472	0/0:21,0:21:63.21:0,63,1007	1/1:0,11:11:33.11:462,33,0	1/1:0,8:8:21.07:293,21,0	1/1:0,22:22:66.22:922,66,0	1/1:0,30:30:78.26:1090,78,0	1/1:0,15:15:42.14:587,42,0	1/1:0,31:31:84.28:1175,84,0	0/0:26,0:26:78.25:0,78,1212	1/1:0,14:14:42.14:587,42,0
chr10	88917030	.	T	TA	1805.39	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-3.073;DP=612;FS=3.108;HRun=7;HaplotypeScore=100.7493;InbreedingCoeff=0.9924;MQ=88.64;MQ0=0;MQRankSum=-2.838;QD=26.55;ReadPosRankSum=-0.027;VQSLOD=3.5879;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.09:0,84,803	1/1:0,6:6:14.97:149,15,0	0/0:24,0:24:45.04:0,45,425	0/0:25,0:26:24.34:0,24,370	0/0:30,0:30:72.11:0,72,695	0/0:19,0:19:48.05:0,48,457	0/0:22,0:22:54.08:0,54,521	0/0:19,0:19:57.09:0,57,551	0/0:18,0:18:48.07:0,48,463	1/1:3,21:24:63.19:761,63,0	1/1:3,16:19:45.05:511,45,0	0/0:19,0:19:51.08:0,51,493	0/0:24,0:24:63.09:0,63,608	0/0:24,0:24:54.07:0,54,521	0/0:20,0:20:54.08:0,54,522	0/0:19,0:19:48.06:0,48,459	1/1:1,18:19:45.14:544,45,0	0/0:25,0:25:45.97:0,46,640	0/0:22,0:22:60.09:0,60,579	0/0:22,0:22:57.07:0,57,545	0/0:10,0:10:30.04:0,30,284	0/0:20,0:20:54.09:0,54,521	0/0:24,0:24:69.11:0,69,666	0/0:32,0:32:84.13:0,84,811	0/0:21,0:21:51.07:0,51,493	0/0:26,2:28:29.98:0,30,572	0/0:40,0:40:99:0,114,1082	0/0:6,0:6:18.03:0,18,174
chr10	88919403	.	C	CA	18767.99	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-9.135;DP=640;FS=0.372;HRun=3;HaplotypeScore=61.4599;InbreedingCoeff=0.9757;MQ=85.33;MQ0=0;MQRankSum=-6.158;QD=36.51;ReadPosRankSum=4.954;VQSLOD=5.0841;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:66.22:923,66,0	1/1:0,3:3:6.02:84,6,0	0/0:23,0:23:66.23:0,66,745	0/0:16,0:16:48.14:0,48,558	1/1:1,22:23:63.12:838,63,0	1/1:0,28:28:69.23:966,69,0	1/1:2,13:15:33.11:462,33,0	1/1:4,31:35:93.31:1303,93,0	1/1:3,31:34:84.27:1160,84,0	1/1:2,21:23:63.21:882,63,0	1/1:0,22:22:66.22:924,66,0	1/1:2,23:25:60.20:840,60,0	1/1:1,23:24:63.21:882,63,0	1/1:1,20:21:48.16:672,48,0	1/1:0,39:39:99:1513,108,0	1/1:1,9:10:27.09:378,27,0	1/1:0,21:21:63.17:860,63,0	1/1:2,16:18:45.15:630,45,0	0/0:23,0:23:63.19:0,63,756	0/0:24,0:24:69.20:0,69,815	1/1:0,21:21:57.19:798,57,0	1/1:4,16:20:57.15:765,57,0	1/1:2,17:19:39.13:546,39,0	1/1:0,14:14:36.12:504,36,0	1/1:1,22:23:63.21:882,63,0	1/1:3,33:36:96.29:1324,96,0	0/0:40,0:40:99:0,114,1368	1/1:3,15:18:45.15:630,45,0
chr10	88919664	.	AGGG	A	2285.60	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.580;DP=477;FS=3.545;HRun=3;HaplotypeScore=112.0516;InbreedingCoeff=0.9800;MQ=65.92;MQ0=11;MQRankSum=0.050;QD=26.27;ReadPosRankSum=1.411;VQSLOD=1.2301;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,23:27:43.43:670,43,0	0/0:6,0:6:17.99:0,18,385	0/0:32,0:21:33.11:0,33,906	0/0:23,0:13:32.75:0,33,501	0/0:11,0:11:30.05:0,30,535	0/0:16,0:16:45.14:0,45,1006	0/0:8,0:8:21.06:0,21,469	1/1:2,20:22:57.04:834,57,0	1/1:0,16:16:33.11:606,33,0	0/0:13,0:12:36.10:0,36,773	0/0:10,0:10:21.06:0,21,435	0/0:17,0:16:45.15:0,45,1087	0/0:16,0:16:19.88:0,20,282	0/0:9,0:9:27.09:0,27,652	0/0:21,0:21:22.12:0,22,294	0/0:19,0:19:33.59:0,34,510	0/0:14,0:14:42.13:0,42,878	0/0:15,0:14:30.08:0,30,371	0/0:14,0:14:39.10:0,39,756	0/0:14,0:13:36.04:0,36,658	0/0:27,0:26:27.82:0,28,445	0/0:14,0:13:39.08:0,39,701	0/0:30,0:30:37.39:0,37,363	0/0:14,0:13:12.03:0,12,204	1/1:1,20:21:18.06:335,18,0	0/0:22,0:20:37.35:0,37,723	0/0:8,0:8:21.07:0,21,512	0/0:16,0:16:41.62:0,42,611
chr10	88919668	.	AGGAGGAGGAGAGGAGGAGGAGG	A	8937.70	PASS	AB=0.714;AC=17;AF=0.304;AN=56;BaseQRankSum=9.158;DP=483;FS=38.221;HRun=0;HaplotypeScore=233.3499;InbreedingCoeff=0.8235;MQ=65.02;MQ0=18;MQRankSum=-8.373;QD=47.80;ReadPosRankSum=3.054;VQSLOD=2.7805;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:35.27:0,35,2264	0/0:7,0:6:15.05:0,15,1259	0/0:32,0:18:23.86:0,24,466	0/0:25,0:13:20.78:0,21,622	0/0:8,0:8:15.05:0,15,1211	0/0:16,0:15:21.07:0,21,1980	0/0:9,0:9:23.92:0,24,1260	0/0:21,0:22:30:0,30,888	0/0:16,0:16:28.62:0,29,1807	0/0:13,0:12:30.10:0,30,2667	0/0:8,0:8:6.02:0,6,473	0/0:17,0:16:27.09:0,27,2466	1/1:5,12:17:20.85:1226,21,0	0/0:10,0:9:18.06:0,18,1338	1/1:8,13:21:24.08:1402,24,0	1/1:9,10:19:15.05:876,15,0	0/0:16,0:16:36.12:0,36,2517	1/1:9,8:16:14.98:876,15,0	0/0:15,0:14:9.03:0,9,625	0/0:12,0:11:15.05:0,15,1171	1/1:17,12:27:3.01:175,3,0	0/0:12,0:11:18.06:0,18,1277	1/1:8,20:27:42.62:2349,43,0	1/1:7,8:13:9.03:358,9,0	0/0:21,0:21:18.06:0,18,1126	0/1:15,10:22:99:973,0,199	0/0:8,0:8:15.05:0,15,1063	1/1:12,4:16:12.04:701,12,0
chr10	88919994	.	AGTCATACACAGGAACAT	A	6508.85	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.038;DP=764;FS=6.433;HRun=0;HaplotypeScore=351.4017;InbreedingCoeff=0.9968;MQ=83.43;MQ0=0;MQRankSum=-10.020;QD=83.45;ReadPosRankSum=2.391;VQSLOD=3.5945;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,8919	1/1:0,14:14:24.08:1150,24,0	0/0:22,0:22:66.22:0,66,3716	0/0:34,0:31:92.96:0,93,3833	0/0:22,0:22:63.22:0,63,4817	0/0:32,0:32:96.33:0,96,6541	0/0:38,0:38:99:0,108,7481	0/0:31,0:31:90.29:0,90,6324	0/0:29,0:29:87.30:0,87,6466	1/1:0,23:23:60.17:2683,60,0	1/1:1,17:18:27.09:1201,27,0	0/0:25,0:25:72.23:0,72,5754	0/0:23,0:23:69.24:0,69,5195	0/0:36,0:36:99:0,108,8224	0/0:37,0:37:99:0,111,9030	0/0:25,0:25:72.23:0,72,5477	1/1:0,23:23:30.10:1475,30,0	0/0:23,0:23:69.24:0,69,5765	0/0:26,0:26:72.25:0,72,4439	0/0:19,0:19:57.20:0,57,3863	0/0:60,0:60:99:0,178,13246	0/0:24,0:24:63.06:0,63,4448	0/0:20,0:20:60.18:0,60,3728	0/0:40,0:40:99:0,114,8819	0/0:24,0:24:69.24:0,69,5344	0/0:24,0:24:72.25:0,72,5882	0/0:27,0:27:81.28:0,81,5926	0/0:6,0:6:18.06:0,18,1296
chr10	88920416	.	G	GA	1501.17	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-3.617;DP=469;FS=4.471;HRun=8;HaplotypeScore=61.5851;InbreedingCoeff=0.9747;MQ=79.64;MQ0=0;MQRankSum=-2.964;QD=22.75;ReadPosRankSum=-0.735;VQSLOD=3.8616;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.02:0,78,708	1/1:1,9:10:27.08:312,27,0	0/0:17,0:17:29.54:0,30,245	0/0:14,0:14:10.36:0,10,189	0/0:19,0:20:53.05:0,53,468	0/0:29,0:28:66.02:0,66,604	0/0:15,0:15:18.38:0,18,333	0/0:30,0:30:84.04:0,84,769	0/0:15,0:15:42.01:0,42,380	1/1:6,21:27:60.18:692,60,0	1/1:4,11:15:27.08:311,27,0	0/0:11,0:11:33.02:0,33,302	0/0:15,0:15:42.02:0,42,384	0/0:9,0:9:27.01:0,27,247	0/0:15,0:15:42.02:0,42,384	0/0:15,0:15:44.99:0,45,402	1/1:2,12:14:30.09:346,30,0	0/0:12,0:12:36.02:0,36,330	0/0:24,1:25:28.39:0,28,507	0/0:13,0:13:24.01:0,24,220	0/0:16,0:16:39.01:0,39,357	0/0:8,0:8:11.99:0,12,105	0/0:17,0:17:42.02:0,42,384	0/0:15,0:15:36:0,36,323	0/0:15,0:15:42.02:0,42,384	0/0:20,0:20:28.19:0,28,389	0/0:21,0:21:51:0,51,458	0/0:9,0:9:27.01:0,27,247
chr10	88920643	.	GAT	G	323.70	PASS	AB=1.000;AC=9;AF=0.205;AN=44;BaseQRankSum=3.353;DP=171;FS=1.125;HRun=0;HaplotypeScore=47.1087;InbreedingCoeff=0.5382;MQ=79.93;MQ0=0;MQRankSum=-0.096;QD=14.71;ReadPosRankSum=1.388;VQSLOD=3.1794;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:15.02:0,15,232	0/0:1,0:1:3.01:0,3,53	0/0:7,0:6:11.90:0,12,139	0/1:9,0:7:6.60:7,0,103	1/1:1,0:1:3.01:41,3,0	1/1:1,7:8:18.06:243,18,0	./.	0/0:42,0:42:99:0,111,1863	0/0:4,0:4:9.03:0,9,158	0/0:2,0:2:6.02:0,6,105	0/0:1,0:1:3.01:0,3,53	1/1:0,2:2:6.02:81,6,0	0/0:3,0:3:9.03:0,9,157	1/1:0,2:2:6.02:81,6,0	./.	0/0:1,0:1:3.01:0,3,52	0/0:20,0:20:60.21:0,60,1040	0/0:20,0:20:39.15:0,39,821	0/0:5,0:5:15.02:0,15,232	./.	0/0:5,0:5:9.03:0,9,158	./.	./.	./.	0/0:9,0:9:24.06:0,24,391	0/0:1,0:1:3.01:0,3,53	0/0:5,0:5:15.05:0,15,262	0/0:15,0:15:42.14:0,42,736
chr10	88920751	.	AAT	A	1615.35	PASS	AC=4;AF=0.143;AN=28;BaseQRankSum=4.079;DP=130;FS=0.000;HRun=0;HaplotypeScore=34.2667;InbreedingCoeff=0.4767;MQ=68.13;MQ0=0;MQRankSum=4.053;QD=32.31;ReadPosRankSum=-4.475;VQSLOD=3.0217;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:4,0:2:3.01:0,3,47	./.	0/0:1,0:1:3.01:0,3,53	0/0:7,0:7:15.05:0,15,262	./.	1/1:6,42:48:99:1671,126,0	1/1:1,1:2:3.01:41,3,0	0/0:1,0:1:3.01:0,3,52	./.	./.	0/0:1,0:1:3.01:0,3,52	./.	./.	./.	0/0:20,0:20:48.16:0,48,839	0/0:8,0:8:21.07:0,21,354	0/0:9,0:9:24.07:0,24,395	0/0:1,0:1:3.01:0,3,49	0/0:1,0:1:3.01:0,3,52	./.	./.	./.	./.	./.	0/0:8,0:8:24.08:0,24,410	0/0:13,0:13:33.11:0,33,578
chr10	88920829	.	C	CTT	4336.77	PASS	AC=38;AF=0.760;AN=50;BaseQRankSum=2.100;DP=167;FS=4.899;HRun=2;HaplotypeScore=51.2234;InbreedingCoeff=0.6291;MQ=80.69;MQ0=0;MQRankSum=-3.264;QD=37.39;ReadPosRankSum=0.092;VQSLOD=4.6884;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:21.07:392,21,0	1/1:0,2:2:2.97:20,3,0	0/0:4,0:4:6.45:0,6,58	0/0:15,0:14:18.16:0,18,203	1/1:5,0:5:6.56:99,7,0	1/1:11,0:11:22.46:222,22,0	./.	1/1:18,12:30:81.17:1309,81,0	1/1:0,2:2:6.02:112,6,0	1/1:0,5:5:15.05:275,15,0	1/1:0,3:3:9.03:168,9,0	1/1:1,0:1:2.84:14,3,0	1/1:0,1:1:3.01:56,3,0	1/1:4,0:4:11.81:111,12,0	1/1:2,0:2:5.98:71,6,0	1/1:1,0:1:2.96:19,3,0	1/1:3,15:18:38.87:512,39,0	1/1:3,0:3:5.98:70,6,0	0/0:19,0:19:57.13:0,57,763	0/0:2,0:2:3.01:0,3,44	0/0:1,0:1:3.01:0,3,35	./.	./.	1/1:0,1:1:3.01:56,3,0	1/1:3,3:6:18.06:322,18,0	1/1:1,3:3:6.02:112,6,0	0/0:9,0:9:27.09:0,27,392	1/1:4,4:8:24.04:397,24,0
chr10	88920885	.	TG	T	4233.93	PASS	AC=28;AF=0.519;AN=54;BaseQRankSum=7.015;DP=262;FS=11.340;HRun=2;HaplotypeScore=62.8868;InbreedingCoeff=0.9289;MQ=63.02;MQ0=0;MQRankSum=-5.055;QD=36.50;ReadPosRankSum=3.611;VQSLOD=4.7606;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:12.04:0,12,171	0/0:6,0:6:15.05:0,15,216	0/0:10,0:9:24.03:0,24,323	0/0:5,0:4:6.02:0,6,90	1/1:0,10:10:30.10:389,30,0	1/1:0,17:17:51.17:662,51,0	1/1:0,4:4:12.04:156,12,0	0/0:33,0:33:96.30:0,96,1399	0/0:5,0:5:12.51:0,13,180	0/0:7,0:7:18.06:0,18,270	0/0:9,0:9:27.09:0,27,404	1/1:0,10:10:30.10:389,30,0	1/1:0,6:6:18.06:228,18,0	1/1:0,13:13:39.13:505,39,0	1/1:0,7:7:21.07:272,21,0	1/1:0,4:4:12.04:156,12,0	0/0:12,0:12:24.97:0,25,359	1/1:0,7:7:21.07:272,21,0	0/0:19,0:19:54.17:0,54,787	0/0:6,0:6:18.06:0,18,270	1/1:1,1:2:3.01:39,3,0	./.	1/1:0,6:6:15:194,15,0	1/1:2,7:9:15.05:192,15,0	0/0:15,0:15:45.15:0,45,673	1/1:1,5:5:15.05:195,15,0	0/0:11,0:11:27.09:0,27,405	1/1:0,15:15:45.15:584,45,0
chr10	88920972	.	GGATA	G	261.23	PASS	AB=1.000;AC=14;AF=0.350;AN=40;BaseQRankSum=5.734;DP=220;FS=3.679;HRun=0;HaplotypeScore=77.6456;InbreedingCoeff=0.5281;MQ=41.04;MQ0=19;MQRankSum=-5.273;QD=5.56;ReadPosRankSum=-2.000;VQSLOD=1.5906;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:5:0.89:2,1,0	1/1:0,1:1:3.01:36,3,0	0/0:21,0:5:15.05:0,15,230	0/0:18,0:6:18.05:0,18,314	./.	./.	0/0:5,0:4:0:0,0,0	0/0:14,0:12:16.42:0,16,149	./.	1/1:1,4:4:12.04:203,12,0	./.	./.	0/0:5,0:5:2.48:0,2,19	./.	1/1:2,0:2:1.77:4,2,0	0/1:4,0:4:0.25:0,0,2	1/1:12,3:15:8.93:108,9,0	0/1:5,0:5:4.13:18,0,4	0/0:20,0:19:45.07:0,45,786	0/0:13,0:13:30.10:0,30,666	0/0:4,0:3:0:0,0,0	./.	1/1:7,0:7:5.79:13,6,0	0/0:5,0:5:2.48:0,2,7	./.	0/0:6,0:5:4.41:0,4,22	0/0:11,0:11:30.10:0,30,711	0/0:3,0:3:3.43:0,3,20
chr10	88920986	.	A	ATT	1786.16	PASS	AB=0.950;AC=23;AF=0.442;AN=52;BaseQRankSum=5.227;DP=267;FS=4.249;HRun=1;HaplotypeScore=82.4657;InbreedingCoeff=0.5731;MQ=44.31;MQ0=11;MQRankSum=-7.011;QD=16.24;ReadPosRankSum=-2.495;VQSLOD=0.0242;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:6:3.63:14,4,0	0/0:1,0:1:3:0,3,26	0/0:22,0:10:9.39:0,9,334	0/0:17,0:7:18.06:0,18,263	0/0:9,0:9:6.02:0,6,81	0/0:8,0:7:6.02:0,6,81	0/0:6,0:5:6.02:0,6,83	0/0:17,0:16:35.01:0,35,299	./.	0/1:6,0:6:33.03:33,0,108	0/1:14,0:14:3.66:4,0,39	0/0:7,0:7:9.03:0,9,118	1/1:2,6:8:21.07:347,21,0	0/0:7,0:7:6.02:0,6,86	1/1:2,1:3:9.01:132,9,0	1/1:1,5:6:15.05:243,15,0	0/1:14,3:17:29.71:30,0,267	1/1:8,3:11:18.05:271,18,0	0/0:18,0:18:54.07:0,54,768	0/0:15,0:15:36.12:0,36,551	1/1:1,6:6:9.46:119,9,0	0/0:5,0:5:2.99:0,3,23	1/1:3,7:10:24.55:407,25,0	1/1:4,2:6:1.67:4,2,0	./.	1/1:3,5:6:9.54:226,10,0	0/0:13,0:13:36.11:0,36,529	1/1:2,3:5:10.24:139,10,0
chr10	88920990	.	ATT	A	737.81	PASS	AC=14;AF=0.269;AN=52;BaseQRankSum=-0.629;DP=267;FS=5.981;HRun=3;HaplotypeScore=87.3769;InbreedingCoeff=0.7823;MQ=45.96;MQ0=6;MQRankSum=0.109;QD=12.30;ReadPosRankSum=0.301;VQSLOD=0.3472;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,5:6:3.87:0,4,25	0/0:1,0:1:3.01:0,3,30	0/0:19,0:11:33.11:0,33,550	0/0:13,0:7:21.07:0,21,382	1/1:0,9:9:6.02:92,6,0	1/1:0,8:7:6.02:92,6,0	1/1:0,6:5:6.02:92,6,0	1/1:14,4:17:26.26:307,26,0	./.	0/0:6,0:6:17.60:0,18,179	0/0:14,0:14:35.65:0,36,277	1/1:0,7:7:9.03:138,9,0	0/0:9,0:9:27.08:0,27,408	1/1:0,7:7:6.02:92,6,0	0/0:3,0:3:9.01:0,9,111	0/0:6,0:6:18.05:0,18,239	0/0:17,0:17:29.66:0,30,431	0/0:12,0:12:30.08:0,30,485	0/0:19,0:19:48.16:0,48,865	0/0:14,0:14:39.08:0,39,713	0/0:7,0:6:10.28:0,10,161	1/1:0,5:5:6.02:92,6,0	0/0:12,0:12:33.55:0,34,441	0/0:6,0:6:6.84:0,7,31	./.	0/0:9,0:7:17.52:0,18,311	0/0:14,0:14:39.13:0,39,725	0/0:5,0:5:12.04:0,12,204
chr10	88921703	.	TAGA	T	5801.14	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.282;DP=686;FS=4.400;HRun=0;HaplotypeScore=131.3978;InbreedingCoeff=0.9999;MQ=76.73;MQ0=0;MQRankSum=-0.537;QD=38.93;ReadPosRankSum=3.298;VQSLOD=6.1227;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,105,2231	0/0:12,0:12:36.12:0,36,785	0/0:14,0:14:42.13:0,42,851	0/0:19,0:19:44.93:0,45,775	1/1:4,21:25:53.95:856,54,0	1/1:3,30:33:84.29:1331,84,0	1/1:1,21:22:57.19:904,57,0	0/0:30,0:30:84.29:0,84,1837	0/0:17,0:17:51.18:0,51,1115	0/0:30,0:30:81.28:0,81,1749	0/0:30,0:30:87.27:0,87,1805	1/1:1,15:16:36.12:571,36,0	0/0:30,0:30:81.27:0,81,1729	1/1:3,25:28:69.23:1094,69,0	0/0:22,0:22:60.21:0,60,1311	0/0:27,0:27:78.27:0,78,1705	0/0:25,0:25:72.25:0,72,1574	0/0:25,0:25:69.24:0,69,1507	0/0:22,0:22:57.18:0,57,1167	0/0:22,0:22:66.23:0,66,1443	0/0:40,0:40:99:0,117,2537	1/1:1,24:25:66.22:1046,66,0	0/0:19,0:19:51.18:0,51,1114	0/0:33,0:33:87.30:0,87,1901	0/0:22,0:22:66.22:0,66,1377	0/0:18,0:18:51.18:0,51,1115	0/0:23,0:23:54.19:0,54,1181	0/0:15,0:15:45.15:0,45,980
chr10	88922059	.	A	AC	979.49	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.256;DP=741;FS=4.454;HRun=4;HaplotypeScore=95.2668;InbreedingCoeff=0.9997;MQ=93.69;MQ0=0;MQRankSum=-0.692;QD=28.81;ReadPosRankSum=-4.750;VQSLOD=1.1514;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,162,1826	0/0:12,0:12:33.09:0,33,373	0/0:32,0:32:62.32:0,62,796	0/0:35,0:35:75.97:0,76,921	0/0:20,0:20:54.15:0,54,612	0/0:27,0:27:81.18:0,81,888	0/0:37,0:37:99:0,102,1125	1/1:6,28:34:84.20:1074,84,0	0/0:30,0:30:84.21:0,84,926	0/0:29,0:29:84.24:0,84,952	0/0:14,0:14:42.11:0,42,466	0/0:22,0:22:57.11:0,57,617	0/0:21,0:21:63.16:0,63,700	0/0:20,0:20:57.14:0,57,629	0/0:37,0:37:99:0,105,1190	0/0:21,0:21:60.16:0,60,673	0/0:29,0:29:81.19:0,81,895	0/0:19,0:19:42.12:0,42,476	0/0:23,0:23:60.17:0,60,681	0/0:26,0:26:78.20:0,78,866	0/0:18,0:18:51.12:0,51,566	0/0:23,0:23:63.12:0,63,692	0/0:28,0:28:69.16:0,69,762	0/0:23,0:23:66.11:0,66,714	0/0:20,0:20:57.16:0,57,647	0/0:28,0:28:84.23:0,84,945	0/0:37,0:36:99:0,105,1181	0/0:16,0:16:48.14:0,48,544
chr10	88923932	.	GA	G	3423.69	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.655;DP=780;FS=1.838;HRun=2;HaplotypeScore=114.5654;InbreedingCoeff=0.9862;MQ=75.24;MQ0=1;MQRankSum=-0.745;QD=34.24;ReadPosRankSum=2.043;VQSLOD=3.4506;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:90.29:1168,90,0	0/0:6,0:6:12.03:0,12,161	0/0:27,0:26:65.90:0,66,863	0/0:27,0:27:60.22:0,60,952	0/0:30,0:30:81.11:0,81,1114	0/0:26,0:26:75.22:0,75,1081	0/0:24,0:24:72.18:0,72,1014	0/0:32,0:32:96.30:0,96,1367	1/1:1,48:49:99:1712,132,0	0/0:35,0:35:96.29:0,96,1399	0/0:14,0:14:36.12:0,36,539	0/0:33,0:33:99:0,99,1437	0/0:28,0:28:84.28:0,84,1257	0/0:30,0:30:90.30:0,90,1344	0/0:48,0:48:99:0,144,2102	0/0:39,1:40:81.60:0,82,1674	0/0:25,0:25:72.22:0,72,1049	0/0:23,0:23:59.37:0,59,955	0/0:18,0:18:54.17:0,54,772	0/0:18,0:18:54.14:0,54,784	0/0:38,0:37:99:0,102,1496	0/0:21,0:21:63.08:0,63,833	0/0:18,0:18:51.13:0,51,739	0/0:42,0:42:99:0,120,1769	1/1:0,18:18:42.14:544,42,0	0/0:44,0:44:99:0,132,1900	0/0:27,0:26:81.27:0,81,1212	0/0:6,0:6:18.01:0,18,243
chr10	88924203	.	A	AG	5554.37	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=0.811;DP=217;FS=45.591;HRun=3;HaplotypeScore=176.6506;InbreedingCoeff=0.6924;MQ=50.62;MQ0=0;MQRankSum=-0.807;QD=30.52;ReadPosRankSum=1.371;VQSLOD=0.5128;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,7:10:21.07:288,21,0	1/1:0,3:4:6.02:78,6,0	1/1:8,0:5:3.48:30,3,0	0/0:5,0:4:8.46:0,8,55	1/1:1,10:11:14.78:176,15,0	1/1:0,6:6:18.06:244,18,0	1/1:2,10:12:36.12:484,36,0	0/1:5,0:5:4.13:9,0,4	1/1:2,7:9:18.06:244,18,0	1/1:1,11:12:30.10:401,30,0	1/1:0,7:7:18.06:247,18,0	1/1:2,9:11:33.07:425,33,0	1/1:0,11:11:30.10:405,30,0	1/1:1,7:8:24.08:323,24,0	1/1:0,8:8:24.08:329,24,0	1/1:1,6:7:18.06:242,18,0	1/1:1,2:3:9.03:116,9,0	1/1:1,3:4:12:143,12,0	0/0:8,0:8:5.20:0,5,106	0/0:6,0:6:17.81:0,18,122	1/1:0,2:2:6.02:82,6,0	1/1:0,6:6:12.04:163,12,0	1/1:0,5:5:15.05:200,15,0	1/1:3,4:7:6.02:82,6,0	1/1:3,7:10:23.90:276,24,0	1/1:2,12:14:36.12:487,36,0	0/0:16,0:16:43.90:0,44,296	1/1:0,2:2:6.02:82,6,0
chr10	88924232	.	AGGCCCCCCCCCCC	A	4464.43	PASS	AB=1.000;AC=43;AF=0.896;AN=48;BaseQRankSum=5.411;DP=161;FS=15.646;HRun=0;HaplotypeScore=169.6889;InbreedingCoeff=0.4129;MQ=77.01;MQ0=0;MQRankSum=-4.089;QD=33.82;ReadPosRankSum=5.146;VQSLOD=3.3017;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,2:8:3.01:117,3,0	./.	0/0:14,0:10:21.55:0,22,614	0/0:9,0:7:15.42:0,15,267	1/1:5,1:6:6.02:105,6,0	1/1:2,1:3:3.01:106,3,0	1/1:5,1:6:3.01:105,3,0	0/1:4,0:4:0:0,0,0	1/1:3,4:7:12.04:401,12,0	1/1:6,2:8:6.02:201,6,0	1/1:3,1:4:3.01:68,3,0	1/1:7,2:9:15.05:379,15,0	1/1:2,4:6:12.04:402,12,0	1/1:3,2:5:12.04:327,12,0	1/1:4,2:6:6.02:218,6,0	1/1:1,3:4:12.04:323,12,0	1/1:2,1:3:3.01:93,3,0	./.	1/1:6,0:6:3.01:49,3,0	1/1:6,0:6:6.02:116,6,0	./.	1/1:3,1:4:3.01:103,3,0	1/1:2,1:3:3.01:96,3,0	1/1:4,1:5:0.47:1,0,0	1/1:3,4:7:12.04:335,12,0	1/1:8,5:13:24.08:712,24,0	1/1:9,0:9:15.04:207,15,0	./.
chr10	88924251	.	GCATA	G	1496.82	PASS	AB=0.700;AC=30;AF=0.652;AN=46;BaseQRankSum=6.589;DP=115;FS=14.189;HRun=0;HaplotypeScore=120.9773;InbreedingCoeff=0.3188;MQ=76.29;MQ0=0;MQRankSum=-1.393;QD=22.68;ReadPosRankSum=1.709;VQSLOD=2.3411;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:3.01:63,3,0	./.	0/0:10,0:9:8.39:0,8,372	0/0:13,0:10:15.45:0,15,370	0/0:5,1:6:3.17:0,3,14	0/1:1,1:2:0.41:40,0,0	1/1:1,2:3:6.02:108,6,0	./.	1/1:2,4:6:12.02:181,12,0	0/1:2,2:4:43.43:78,0,43	1/1:0,1:1:1.55:4,2,0	0/1:6,2:8:24.48:75,0,24	1/1:1,6:7:18.06:294,18,0	1/1:3,2:5:6.28:95,6,0	1/1:0,2:2:6.02:108,6,0	1/1:1,3:4:8.72:100,9,0	1/1:0,1:1:3.01:38,3,0	./.	0/0:1,0:1:3.01:0,3,65	0/0:5,0:5:6.21:0,6,152	./.	1/1:0,1:1:3.01:41,3,0	1/1:2,1:3:1.46:38,1,0	./.	1/1:0,4:4:10.65:99,11,0	0/1:6,6:12:46.32:274,0,46	0/0:10,0:10:30.06:0,30,701	1/1:1,0:1:2.37:8,2,0
chr10	88924273	.	ATGG	A	401.91	PASS	AB=0.842;AC=16;AF=0.320;AN=50;BaseQRankSum=-0.416;DP=159;FS=9.939;HRun=0;HaplotypeScore=118.3473;InbreedingCoeff=0.1021;MQ=40.02;MQ0=6;MQRankSum=-0.799;QD=6.09;ReadPosRankSum=2.242;VQSLOD=1.4271;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:2:3.01:0,3,44	0/1:1,0:1:0:0,0,0	0/0:16,0:4:12.03:0,12,213	0/0:25,0:9:21.04:0,21,475	1/1:4,3:7:11.60:97,12,0	1/1:1,1:2:2.90:16,3,0	0/0:3,0:3:6.84:0,7,43	0/1:6,3:8:53.55:54,0,59	0/0:5,1:6:9.91:0,10,111	0/1:2,2:4:25.53:91,0,26	./.	0/1:5,2:7:16.11:16,0,77	0/1:6,1:7:30.71:31,0,66	0/1:4,1:5:10.95:11,0,50	0/0:2,0:2:0.47:0,0,1	0/0:4,0:4:4.25:0,4,32	0/0:1,0:1:0.47:0,0,1	1/1:1,1:2:3.01:39,3,0	0/0:5,0:5:4.74:0,5,270	0/0:9,0:9:18.01:0,18,300	./.	0/0:3,0:2:2.98:0,3,22	1/1:1,2:3:1.90:6,2,0	./.	0/1:4,0:4:2.82:51,0,3	0/1:12,3:14:99:126,0,110	0/0:10,0:10:30.08:0,30,658	0/0:1,0:1:3.01:0,3,35
chr10	88924366	.	GGGAAACAT	G	790.72	PASS	AC=22;AF=0.688;AN=32;BaseQRankSum=5.752;DP=79;FS=27.261;HRun=0;HaplotypeScore=61.6974;InbreedingCoeff=0.6740;MQ=110.68;MQ0=1;MQRankSum=-4.621;QD=27.27;ReadPosRankSum=2.663;VQSLOD=1.4157;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:2:2.93:19,3,0	1/1:1,0:1:2.97:20,3,0	0/0:16,0:13:31.98:0,32,836	0/0:15,0:11:20.07:0,20,539	./.	1/1:1,0:1:2.97:20,3,0	1/1:3,0:3:8.78:55,9,0	1/1:0,7:7:21.04:339,21,0	./.	./.	1/1:1,0:1:3.01:40,3,0	1/1:2,0:2:5.96:45,6,0	./.	./.	1/1:2,0:2:5.99:60,6,0	./.	1/1:3,0:3:8.90:110,9,0	./.	0/0:5,0:5:15.05:0,15,516	0/0:4,0:4:12.04:0,12,475	./.	./.	1/1:5,0:5:12.01:179,12,0	1/1:2,0:2:3.01:39,3,0	./.	./.	0/0:10,0:10:30.10:0,30,1063	./.
chr10	88924368	.	GAAAC	G	990.96	PASS	AC=22;AF=0.688;AN=32;BaseQRankSum=5.604;DP=79;FS=23.500;HRun=0;HaplotypeScore=50.8664;InbreedingCoeff=0.6538;MQ=110.68;MQ0=1;MQRankSum=-4.439;QD=34.17;ReadPosRankSum=3.528;VQSLOD=1.7963;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:2:2.96:19,3,0	1/1:0,1:1:3.01:58,3,0	0/0:16,0:13:15.78:0,16,607	0/0:15,0:11:9.49:0,9,414	./.	1/1:0,1:1:3.01:58,3,0	1/1:0,3:3:9.03:174,9,0	1/1:7,0:7:12.96:103,13,0	./.	./.	1/1:0,1:1:3.01:32,3,0	1/1:0,2:2:6.02:116,6,0	./.	./.	1/1:0,2:2:6.02:116,6,0	./.	1/1:0,3:3:9.03:171,9,0	./.	0/0:5,0:5:15.05:0,15,416	0/0:4,0:4:12.04:0,12,323	./.	./.	1/1:0,5:5:12.04:220,12,0	1/1:0,2:2:3.01:58,3,0	./.	./.	0/0:10,0:10:30.10:0,30,731	./.
chr10	88924600	.	G	GCGGAC	24964.15	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.611;DP=429;FS=7.677;HRun=0;HaplotypeScore=89.8073;InbreedingCoeff=0.8506;MQ=57.26;MQ0=0;MQRankSum=-9.383;QD=64.51;ReadPosRankSum=4.721;VQSLOD=5.5773;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:24:42.14:1271,42,0	1/1:1,6:8:15.05:473,15,0	0/0:20,0:20:56.98:0,57,1148	0/0:22,0:22:58.03:0,58,1121	1/1:4,10:14:21.07:663,21,0	1/1:1,9:11:27.09:747,27,0	1/1:4,19:24:42.06:1098,42,0	1/1:11,19:34:96.27:2601,96,0	1/1:4,12:18:42.14:1162,42,0	1/1:0,8:9:27.09:806,27,0	1/1:0,6:7:15.05:473,15,0	1/1:3,18:22:48.16:1488,48,0	1/1:3,11:14:30.10:946,30,0	1/1:0,16:18:48.16:1515,48,0	1/1:2,8:11:18.06:569,18,0	1/1:0,12:13:36.12:1138,36,0	1/1:3,20:25:50.88:1472,51,0	1/1:2,17:19:54.19:1642,54,0	1/1:1,17:19:57.20:1681,57,0	1/1:2,5:8:12:305,12,0	1/1:5,19:24:36.05:900,36,0	1/1:0,3:3:6.02:189,6,0	1/1:1,6:7:18.06:568,18,0	1/1:1,10:11:9.50:286,10,0	1/1:3,3:6:9.03:284,9,0	1/1:0,11:11:33.11:952,33,0	1/1:0,19:21:45.15:1393,45,0	1/1:0,5:5:12.04:341,12,0
chr10	88925783	.	CAAA	C	4929.97	PASS	AB=0.678;AC=41;AF=0.732;AN=56;BaseQRankSum=3.158;DP=507;FS=3.757;HRun=17;HaplotypeScore=88.3773;InbreedingCoeff=0.6323;MQ=52.90;MQ0=14;MQRankSum=2.070;QD=12.67;ReadPosRankSum=5.954;VQSLOD=2.3574;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:40:96.42:0,96,1295	1/1:1,2:3:8.81:75,9,0	0/0:9,0:3:6:0,6,103	0/0:9,0:6:14.67:0,15,159	1/1:4,10:16:31.51:323,32,0	1/1:9,14:26:40.37:414,40,0	1/1:9,12:22:28.07:292,28,0	0/0:16,0:21:43.18:0,43,458	0/0:13,0:17:32.96:0,33,412	1/1:4,9:14:29.80:294,30,0	1/1:5,6:13:21.12:189,21,0	0/1:7,5:12:10.78:79,0,11	1/1:6,10:19:32.62:298,33,0	1/1:10,7:16:6.46:115,6,0	1/1:4,10:15:20.45:189,20,0	0/1:4,11:16:19.08:149,0,19	1/1:15,14:30:4.94:419,5,0	1/1:10,9:18:26.86:255,27,0	0/1:13,5:18:32.65:185,0,33	1/1:10,15:24:26.10:264,26,0	1/1:3,9:11:21.03:216,21,0	1/1:8,12:20:23.53:246,24,0	1/1:8,11:20:13.16:151,13,0	1/1:9,2:10:2.69:31,3,0	0/0:12,0:15:30.83:0,31,420	1/1:5,10:18:17.50:312,17,0	1/1:6,15:21:23.69:232,24,0	1/1:2,9:11:20.88:202,21,0
chr10	88926401	.	CTG	C	2212.84	PASS	AB=0.976;AC=36;AF=0.667;AN=54;BaseQRankSum=6.761;DP=583;FS=6.494;HRun=0;HaplotypeScore=143.2635;InbreedingCoeff=0.4439;MQ=50.28;MQ0=27;MQRankSum=-2.034;QD=5.55;ReadPosRankSum=-1.921;VQSLOD=2.2336;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:41,2:38:14.64:128,15,0	0/1:6,0:6:0.84:16,0,1	0/0:26,0:11:15.62:0,16,281	0/0:47,0:20:11.70:0,12,478	1/1:11,1:10:2.94:18,3,0	1/1:16,2:14:14.90:118,15,0	0/1:20,0:11:4.91:62,0,5	1/1:37,0:31:24.88:258,25,0	1/1:31,1:31:32.15:242,32,0	0/1:25,0:21:32.67:230,0,33	0/1:9,0:8:0:0,0,0	1/1:15,2:14:10.34:186,10,0	1/1:17,2:17:20.59:138,21,0	0/1:16,1:16:0.15:115,0,0	1/1:18,1:19:17.98:149,18,0	1/1:13,1:13:11.76:81,12,0	0/1:18,0:17:35.03:87,0,35	0/1:11,2:13:3.83:138,0,4	0/0:32,0:24:72.09:0,72,1104	0/0:24,0:23:63.17:0,63,1077	1/1:7,0:7:2.68:26,3,0	./.	0/1:9,0:7:0:0,0,0	1/1:11,0:9:8.98:73,9,0	1/1:18,0:16:6.41:45,6,0	1/1:23,0:20:25.16:217,25,0	0/0:35,0:35:91.17:0,91,1602	1/1:11,1:11:7.63:54,8,0
chr10	88926411	.	CTGTG	C	3696.52	PASS	AB=0.954;AC=38;AF=0.731;AN=52;BaseQRankSum=8.560;DP=554;FS=3.295;HRun=0;HaplotypeScore=146.8135;InbreedingCoeff=0.4825;MQ=41.88;MQ0=37;MQRankSum=-2.448;QD=9.20;ReadPosRankSum=-2.863;VQSLOD=2.4715;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,13:35:8.53:116,9,0	0/1:9,1:10:0.75:92,0,1	0/1:15,0:6:1.39:1,0,156	0/0:33,0:11:19.93:0,20,493	1/1:8,0:8:2.94:18,3,0	1/1:15,1:14:10.83:190,11,0	1/1:20,1:12:4.55:29,5,0	1/1:32,0:23:48.21:620,48,0	1/1:17,11:28:20.35:347,20,0	0/1:25,1:21:99:303,0,240	0/1:10,0:9:0:0,0,0	1/1:14,0:10:13.09:141,13,0	1/1:15,6:19:24.43:267,24,0	1/1:16,1:16:14.84:158,15,0	1/1:17,2:19:17.93:223,18,0	1/1:11,3:13:8.84:86,9,0	0/1:16,1:16:45.11:188,0,45	1/1:8,4:12:6.03:348,6,0	0/0:30,0:21:63.20:0,63,1342	0/0:27,0:26:60.21:0,60,1528	1/1:8,0:8:5.99:68,6,0	./.	0/1:9,0:7:0:0,0,0	./.	1/1:18,0:16:6.01:61,6,0	1/1:17,2:18:4.60:302,5,0	0/0:29,0:30:86.78:0,87,2199	1/1:12,2:12:16.49:138,16,0
chr10	88926423	.	CTG	C	1352.49	PASS	AB=0.993;AC=34;AF=0.654;AN=52;BaseQRankSum=7.395;DP=540;FS=5.409;HRun=0;HaplotypeScore=146.7867;InbreedingCoeff=0.2893;MQ=37.08;MQ0=34;MQRankSum=-3.245;QD=3.19;ReadPosRankSum=-2.963;VQSLOD=1.9650;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:45,1:38:5.43:29,5,0	1/1:12,0:12:1.86:34,2,0	0/0:5,0:3:2.20:0,2,48	0/0:13,0:5:11.59:0,12,73	0/1:16,0:13:0:0,0,0	1/1:19,0:16:8.63:67,9,0	0/1:24,0:14:11.16:19,0,11	1/1:33,2:24:20.66:221,21,0	0/1:29,0:28:15.24:37,0,15	0/1:28,0:20:99:128,0,271	0/1:10,0:9:0:0,0,0	0/1:13,0:9:1.61:92,0,2	1/1:20,0:18:4.70:94,5,0	1/1:19,0:18:11.15:107,11,0	1/1:14,0:14:8.98:73,9,0	1/1:13,0:12:7.45:37,7,0	0/1:18,0:17:64.82:81,0,65	1/1:13,0:13:22.66:169,23,0	0/0:22,0:16:44.92:0,45,586	0/0:29,0:28:64.97:0,65,1070	1/1:9,0:9:8.67:54,9,0	1/1:21,0:14:2.84:14,3,0	./.	./.	1/1:21,0:19:6.21:31,6,0	1/1:26,0:20:18.53:137,19,0	0/0:29,0:29:76.83:0,77,1375	0/1:17,1:16:26.89:89,0,27
chr10	88926425	.	GTC	G	1005.22	PASS	AB=0.874;AC=22;AF=0.500;AN=44;BaseQRankSum=3.542;DP=537;FS=9.583;HRun=0;HaplotypeScore=150.3696;InbreedingCoeff=0.2483;MQ=37.08;MQ0=34;MQRankSum=-2.996;QD=3.15;ReadPosRankSum=-3.560;VQSLOD=1.2694;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,15:39:6.16:78,6,0	0/0:13,0:13:5.36:0,5,30	./.	./.	./.	0/1:16,3:16:0.05:0,0,0	0/0:18,5:13:3.01:0,3,42	0/1:36,0:25:37.59:38,0,147	1/1:9,21:29:8.44:103,8,0	0/0:29,0:21:35.17:0,35,384	./.	0/1:12,1:9:22.94:56,0,23	0/1:15,5:18:20.41:136,0,20	1/1:14,5:18:11.19:138,11,0	0/1:9,4:13:0.02:0,0,1	1/1:10,4:13:8.35:70,8,0	0/0:16,0:17:11.87:0,12,102	0/1:12,1:13:25.12:68,0,25	0/0:20,0:15:30.10:0,30,482	0/0:29,0:28:60.68:0,61,985	1/1:7,2:9:11.50:111,11,0	1/1:17,5:15:3.01:39,3,0	./.	./.	1/1:14,7:19:3.01:39,3,0	0/1:21,3:18:3.99:131,0,4	0/0:27,0:27:75.09:0,75,1195	0/1:14,4:16:38.30:146,0,38
chr10	88926441	.	CTCTCTG	C	1076.25	PASS	AB=0.868;AC=6;AF=0.120;AN=50;BaseQRankSum=1.506;DP=595;FS=1.347;HRun=0;HaplotypeScore=187.8501;InbreedingCoeff=0.1230;MQ=37.02;MQ0=38;MQRankSum=-3.816;QD=8.68;ReadPosRankSum=-1.294;VQSLOD=2.0661;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:55,2:48:11.54:0,12,331	0/1:1,11:12:4.06:99,0,4	./.	./.	0/0:23,0:21:9.03:0,9,185	0/0:18,0:16:11.45:0,11,289	0/0:29,0:19:6.02:0,6,157	1/1:25,26:40:13.12:751,13,0	0/0:31,1:31:24.08:0,24,518	0/1:26,0:17:99:171,0,123	./.	0/0:14,0:10:12.04:0,12,251	0/0:22,0:20:3.59:0,4,360	0/0:19,0:18:17.10:0,17,344	0/0:14,0:14:3.26:0,3,71	0/0:19,0:17:0.98:0,1,264	0/1:18,1:18:22.91:159,0,23	0/1:16,0:16:16.34:16,0,449	0/0:17,0:14:30.05:0,30,762	0/0:28,0:27:52.44:0,52,1412	0/0:14,0:14:21.07:0,21,550	0/0:26,0:19:6.02:0,6,163	0/0:10,0:8:3.01:0,3,80	0/0:13,0:10:3.01:0,3,50	0/0:20,2:20:6.02:0,6,168	0/0:29,0:23:32.84:0,33,814	0/0:30,0:30:76.49:0,76,1988	0/0:17,0:16:23.33:0,23,600
chr10	88926445	.	CTG	C	660.29	PASS	AB=0.957;AC=8;AF=0.154;AN=52;BaseQRankSum=3.671;DP=594;FS=2.874;HRun=0;HaplotypeScore=155.5319;InbreedingCoeff=0.1719;MQ=36.86;MQ0=39;MQRankSum=-5.285;QD=4.29;ReadPosRankSum=-1.668;VQSLOD=2.4688;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,1:47:11.59:0,12,181	1/1:12,0:12:0.70:28,1,0	0/0:5,0:1:3:0,3,26	./.	0/0:25,0:23:11.99:0,12,161	0/0:17,0:15:11.66:0,12,227	0/0:30,0:20:9.01:0,9,139	1/1:51,0:40:71.25:548,71,0	0/0:34,0:33:29.89:0,30,404	0/1:26,1:17:95.07:108,0,95	./.	0/0:12,0:9:14.94:0,15,177	0/0:21,0:19:27.04:0,27,247	0/0:17,0:16:16.34:0,16,127	0/0:14,0:14:3.45:0,3,58	0/0:20,0:17:14.76:0,15,207	0/1:15,3:18:33.60:71,0,34	0/1:16,0:16:18.60:19,0,332	0/0:20,0:16:42.02:0,42,673	0/0:23,0:22:58.05:0,58,1036	0/0:14,0:14:18.99:0,19,313	0/0:25,0:18:6:0,6,90	0/0:11,0:9:6.01:0,6,78	0/0:13,0:10:3:0,3,49	0/0:22,0:20:5.18:0,5,94	0/1:29,0:23:18.10:18,0,485	0/0:27,0:27:76.13:0,76,1427	0/0:16,0:15:30.45:0,30,346
chr10	88926463	.	G	GTC	4192.94	PASS	AB=0.692;AC=29;AF=0.518;AN=56;BaseQRankSum=-2.439;DP=701;FS=13.304;HRun=0;HaplotypeScore=138.1219;InbreedingCoeff=0.8259;MQ=42.31;MQ0=30;MQRankSum=-0.122;QD=12.59;ReadPosRankSum=3.751;VQSLOD=3.0153;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:44:11.91:0,12,185	0/0:14,0:14:11.87:0,12,148	0/0:18,0:3:6.02:0,6,76	0/0:34,0:8:13.72:0,14,135	1/1:13,18:29:15.05:251,15,0	1/1:6,12:18:13.29:204,13,0	1/1:10,21:23:8.86:150,9,0	0/0:53,0:47:71.82:0,72,932	0/0:36,0:35:42.01:0,42,524	0/0:31,0:25:18.46:0,18,417	0/0:12,0:12:12.04:0,12,152	1/1:3,13:13:15.05:251,15,0	1/1:7,15:21:10.99:338,11,0	1/1:3,17:21:15.87:253,16,0	1/1:5,15:20:2.66:50,3,0	1/1:6,17:20:11.97:201,12,0	0/0:24,0:23:23.66:0,24,337	0/1:10,8:18:4.36:470,0,4	0/0:26,0:22:48.15:0,48,596	0/0:23,0:22:51.63:0,52,650	1/1:8,8:16:24.08:401,24,0	1/1:6,19:21:8.33:150,8,0	1/1:4,10:12:6.02:100,6,0	1/1:5,10:12:8.53:150,9,0	0/0:17,0:15:11.97:0,12,152	1/1:22,12:29:17.94:772,18,0	0/0:26,0:26:28.07:0,28,727	1/1:3,21:25:27.09:451,27,0
chr10	88926469	.	C	CTCTG	214.95	PASS	AB=0.993;AC=20;AF=0.357;AN=56;BaseQRankSum=9.172;DP=730;FS=10.848;HRun=0;HaplotypeScore=175.6574;InbreedingCoeff=-0.0467;MQ=47.93;MQ0=24;MQRankSum=-0.910;QD=0.49;ReadPosRankSum=6.718;VQSLOD=0.8852;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:50,3:46:38.68:39,0,258	0/0:17,0:17:19.32:0,19,237	0/0:29,0:10:25.78:0,26,272	0/0:43,0:14:23.91:0,24,281	0/1:30,0:28:8.05:8,0,35	1/1:17,0:17:3.21:13,3,0	0/1:30,0:23:5.46:5,0,12	0/1:53,0:47:18.66:19,0,1466	0/0:36,0:35:42.11:0,42,771	0/1:32,1:26:99:109,0,612	0/0:12,0:12:15.04:0,15,252	0/1:16,0:14:10.90:11,0,14	0/1:25,0:23:10.33:10,0,36	1/1:23,0:22:1.87:13,2,0	0/0:20,0:20:0.09:0,0,20	0/1:22,0:19:5.32:5,0,25	0/0:22,3:24:1.13:0,1,488	0/1:18,0:18:50.07:50,0,65	0/0:25,0:22:57.15:0,57,970	0/0:22,0:22:57.17:0,57,1009	0/1:18,0:18:13.51:14,0,51	0/1:27,0:23:2.59:3,0,39	0/0:16,0:14:0.36:0,0,38	1/1:16,0:13:4.93:13,5,0	0/0:18,0:16:12.04:0,12,227	0/1:35,0:30:18.68:19,0,135	0/0:26,0:26:74.78:0,75,1233	1/1:25,0:25:14.26:40,14,0
chr10	88926579	.	GCCTC	G	141.79	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=0.306;DP=643;FS=6.059;HRun=0;HaplotypeScore=117.6349;InbreedingCoeff=0.7171;MQ=53.09;MQ0=17;MQRankSum=1.810;QD=3.02;ReadPosRankSum=-2.655;VQSLOD=1.4511;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,4:23:11.61:115,12,0	0/0:14,0:14:36.12:0,36,1036	0/0:42,0:17:20.45:0,20,536	0/0:88,0:25:19.56:0,20,362	0/0:21,0:21:33.04:0,33,557	0/0:10,0:9:12:0,12,256	0/0:20,0:16:11.50:0,12,233	0/0:45,0:40:99:0,111,2541	1/1:7,2:8:5.99:50,6,0	0/0:36,0:36:99:0,102,2802	0/0:20,0:18:36.07:0,36,825	0/0:7,1:6:4.57:0,5,56	0/0:16,0:16:10.51:0,11,109	0/0:12,1:10:5.98:0,6,95	0/0:9,1:9:8.98:0,9,179	0/0:9,0:7:5.95:0,6,92	0/0:26,0:25:57.65:0,58,1441	0/0:10,2:11:15.05:0,15,337	0/0:21,0:16:48.12:0,48,1189	0/0:45,0:45:99:0,132,3429	0/0:18,0:18:8.58:0,9,162	0/0:13,0:13:12.01:0,12,257	0/0:13,1:14:9.03:0,9,213	0/0:25,0:23:17.80:0,18,394	1/1:6,8:13:9.01:100,9,0	0/0:22,0:19:24.44:0,24,905	0/0:38,0:38:99:0,114,3059	0/0:9,0:9:24.06:0,24,498
chr10	88926599	.	GTC	G	1649.42	PASS	AB=0.914;AC=16;AF=0.286;AN=56;BaseQRankSum=5.241;DP=667;FS=0.592;HRun=0;HaplotypeScore=114.7174;InbreedingCoeff=0.2877;MQ=42.71;MQ0=20;MQRankSum=1.960;QD=4.89;ReadPosRankSum=4.373;VQSLOD=2.6542;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,2:24:2:0,2,6	1/1:5,14:19:35.51:457,36,0	0/0:40,0:9:6.82:0,7,56	0/1:89,0:21:3.75:4,0,81	0/0:13,0:15:6.01:0,6,63	0/1:11,0:12:11.46:11,0,14	0/1:19,0:16:0.01:0,0,0	0/0:40,0:34:84.06:0,84,1218	0/0:10,2:12:2.46:0,2,39	0/1:20,25:41:81.01:725,0,81	1/1:9,11:15:12.04:152,12,0	0/1:14,0:14:4.91:17,0,5	0/0:10,0:12:0.83:0,1,2	0/1:14,0:14:0.18:0,0,0	0/1:8,0:10:0:0,0,0	0/0:9,0:10:2.37:0,2,8	1/1:6,16:21:21.79:371,22,0	0/0:9,0:9:1.82:0,2,5	0/0:23,0:16:42.13:0,42,677	0/0:43,0:43:99:0,102,1667	0/1:18,0:17:0:0,0,0	0/0:7,0:10:6.01:0,6,63	0/0:11,0:13:3.01:0,3,31	0/0:17,1:18:1.46:0,1,28	0/1:9,6:14:0.02:0,0,0	0/1:18,2:19:50.10:50,0,130	0/0:44,0:44:99:0,114,1775	0/0:8,0:8:9.84:0,10,90
chr10	88926607	.	C	CTG	37.60	PASS	AB=0.984;AC=19;AF=0.339;AN=56;BaseQRankSum=5.130;DP=693;FS=2.908;HRun=0;HaplotypeScore=132.0949;InbreedingCoeff=0.1999;MQ=36.59;MQ0=18;MQRankSum=-0.782;QD=0.12;ReadPosRankSum=-2.720;VQSLOD=1.8505;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:24:0.09:0,0,0	0/0:22,0:22:28.24:0,28,202	0/0:33,0:5:5.95:0,6,49	0/1:72,0:14:4.54:5,0,139	1/1:17,0:14:4.07:12,4,0	0/1:15,0:12:6.03:36,0,6	0/1:21,2:16:0.16:0,0,1	0/0:52,0:44:99:0,115,1327	0/1:17,0:16:2:2,0,40	0/0:51,0:45:11.97:0,12,601	0/0:25,0:20:11.61:0,12,68	0/0:23,0:15:5.19:0,5,20	0/1:11,0:11:7.89:10,0,8	1/1:20,0:16:2.79:25,3,0	0/1:18,0:14:0:0,0,0	0/0:16,0:13:2.68:0,3,19	0/0:22,0:21:3.97:0,4,169	0/0:9,0:7:7.68:0,8,33	0/0:24,0:18:51.11:0,51,698	0/0:38,0:38:99:0,105,1543	0/1:18,2:18:0.02:0,0,0	1/1:16,0:14:1.85:5,2,0	1/1:15,0:14:1.43:4,1,0	0/1:19,0:16:7.07:7,0,13	0/0:17,1:17:0:0,0,1	0/1:22,0:19:50.15:50,0,88	0/0:42,0:42:99:0,123,1735	0/1:7,0:7:6.48:6,0,35
chr10	88926615	.	CTCTG	C	607.40	PASS	AB=0.910;AC=19;AF=0.352;AN=54;BaseQRankSum=6.232;DP=683;FS=2.286;HRun=0;HaplotypeScore=137.6172;InbreedingCoeff=0.2637;MQ=34.77;MQ0=21;MQRankSum=-7.022;QD=2.28;ReadPosRankSum=-2.906;VQSLOD=1.8625;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,4:26:1.85:0,2,6	0/1:20,1:21:10.39:10,0,638	0/0:25,0:2:2.14:0,2,19	0/0:53,0:8:4.92:0,5,113	0/0:16,2:15:3.63:0,4,10	1/1:13,1:11:9.14:63,9,0	0/0:19,3:16:2.42:0,2,14	0/0:60,2:52:29.81:0,30,2142	0/0:15,5:19:7.96:0,8,86	0/1:50,4:46:99:288,0,1388	0/0:32,1:27:11.07:0,11,202	1/1:23,0:15:5.99:50,6,0	1/1:14,1:14:5.04:62,5,0	0/1:19,0:14:0.10:0,0,1	0/1:13,3:12:0:0,0,0	1/1:12,2:11:2.93:35,3,0	0/1:18,1:18:58.81:59,0,505	0/0:8,0:6:5.70:0,6,23	0/0:24,0:18:50.98:0,51,1121	0/0:43,0:43:99:0,114,2558	./.	0/0:14,3:15:3.28:0,3,9	1/1:15,2:15:2.60:10,3,0	1/1:11,3:12:0.24:1,0,0	0/1:13,5:17:0.01:0,0,0	0/1:19,2:17:99:167,0,190	0/0:39,0:39:99:0,102,2505	0/0:6,0:6:0.64:0,1,36
chr10	88926617	.	CTG	C	420.52	PASS	AB=0.850;AC=17;AF=0.304;AN=56;BaseQRankSum=6.042;DP=673;FS=0.000;HRun=0;HaplotypeScore=128.4882;InbreedingCoeff=0.1017;MQ=34.49;MQ0=19;MQRankSum=-6.319;QD=1.46;ReadPosRankSum=-1.700;VQSLOD=2.0421;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,3:26:1.81:0,2,6	0/1:19,3:22:6.31:6,0,332	0/0:24,0:2:2.12:0,2,19	0/0:49,0:8:4.92:0,5,93	0/0:12,5:14:5.92:0,6,38	1/1:7,6:10:7.24:48,7,0	0/0:17,4:16:1.98:0,2,12	0/0:66,0:55:99:0,114,1958	0/1:17,3:19:1.94:2,0,23	0/1:45,8:45:99:231,0,903	0/0:29,3:26:11.06:0,11,110	1/1:9,13:14:1.59:33,2,0	0/1:11,4:14:14.47:71,0,14	0/1:10,10:15:0.11:0,0,0	0/1:7,9:12:0:0,0,0	1/1:8,7:12:2.91:44,3,0	0/1:16,2:17:33.95:34,0,220	0/0:5,3:6:9.01:0,9,89	0/0:22,0:17:45.55:0,46,822	0/0:43,0:43:99:0,120,1969	0/1:18,1:16:0:0,0,0	0/0:13,4:15:6.01:0,6,70	0/0:12,4:14:2.70:0,3,13	0/1:16,0:13:8.86:9,0,16	0/1:17,1:17:0.01:0,0,0	0/1:17,4:17:72.67:73,0,137	0/0:35,0:35:99:0,103,1876	0/0:6,0:6:2.44:0,2,47
chr10	88926619	.	G	GTC	249.20	PASS	AB=0.973;AC=23;AF=0.442;AN=52;BaseQRankSum=6.939;DP=689;FS=17.701;HRun=0;HaplotypeScore=136.5938;InbreedingCoeff=0.3384;MQ=34.23;MQ0=20;MQRankSum=-5.410;QD=0.76;ReadPosRankSum=-5.255;VQSLOD=-0.5414;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:24,8:28:0.09:0,0,0	0/0:21,0:21:13.06:0,13,373	1/1:20,0:2:0.47:1,0,0	0/0:42,0:8:5.90:0,6,47	./.	1/1:16,0:13:7.95:44,8,0	0/0:24,0:17:0.06:0,0,1	0/0:69,0:58:27.10:0,27,1153	1/1:17,3:19:2.20:11,2,0	0/1:54,0:46:26.44:26,0,833	0/0:33,0:27:9.03:0,9,120	1/1:22,0:14:5.20:30,5,0	1/1:15,0:14:8.81:53,9,0	0/1:22,0:17:0.09:0,0,0	0/1:19,0:15:0:0,0,0	1/1:16,0:13:2.90:16,3,0	0/0:18,0:17:11.98:0,12,301	0/1:7,0:6:11.88:12,0,12	0/0:22,0:17:42.13:0,42,543	0/0:44,0:44:96.24:0,96,1240	0/1:20,0:17:0:0,0,0	./.	0/1:16,0:14:0:0,0,0	1/1:16,0:13:4.15:19,4,0	0/0:14,3:16:0:0,0,0	0/1:20,0:19:93.61:144,0,94	0/0:36,0:36:99:0,100,1283	0/1:7,0:6:23.60:28,0,24
chr10	88926625	.	CTG	C	470.10	PASS	AB=0.988;AC=28;AF=0.500;AN=56;BaseQRankSum=6.780;DP=691;FS=3.400;HRun=0;HaplotypeScore=141.1083;InbreedingCoeff=0.0772;MQ=33.77;MQ0=20;MQRankSum=-5.736;QD=1.07;ReadPosRankSum=-3.835;VQSLOD=1.1778;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:33:2.68:12,3,0	0/1:22,0:22:18.39:18,0,383	1/1:10,0:1:0.47:1,0,0	0/1:28,0:5:1.15:1,0,6	0/0:19,0:16:0:0,0,0	1/1:17,0:14:9.11:38,9,0	1/1:26,0:19:2.04:7,2,0	0/0:76,0:61:84.79:0,85,1384	0/1:20,0:19:29.56:30,0,48	0/1:56,0:48:99:259,0,775	0/0:33,0:27:11.04:0,11,114	0/1:23,0:15:2.68:3,0,5	0/1:15,1:15:19.45:19,0,19	0/0:23,0:18:0.36:0,0,1	0/1:18,0:14:0.12:0,0,0	1/1:16,0:13:2.29:12,2,0	0/1:16,0:15:28.76:29,0,281	0/1:7,1:6:5.64:6,0,11	0/0:19,0:15:45.14:0,45,793	0/0:42,0:42:99:0,111,1932	0/1:21,0:18:0:0,0,0	0/1:19,0:15:0:0,0,0	1/1:15,1:14:2.98:24,3,0	1/1:15,1:12:1.67:22,2,0	0/1:20,0:19:0.02:0,0,0	0/1:27,0:24:72.06:91,0,72	0/0:38,0:38:99:0,108,1788	0/1:8,0:6:6.36:34,0,6
chr10	88926633	.	CTCTGTG	C	1139.98	PASS	AB=0.947;AC=17;AF=0.315;AN=54;BaseQRankSum=4.446;DP=700;FS=14.686;HRun=0;HaplotypeScore=169.2601;InbreedingCoeff=-0.0564;MQ=33.26;MQ0=19;MQRankSum=-4.998;QD=2.80;ReadPosRankSum=-0.237;VQSLOD=2.0326;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:36:2.18:6,2,0	0/0:25,0:24:8.85:0,9,341	./.	0/0:17,0:3:2.88:0,3,15	0/1:23,0:18:0:0,0,0	0/1:14,1:13:62.02:62,0,67	0/1:24,2:19:23.84:65,0,24	0/1:64,14:65:99:753,0,1220	0/0:25,0:23:20.41:0,20,156	0/1:56,0:46:9.52:10,0,955	0/0:36,0:30:7.57:0,8,105	0/0:23,1:16:6.84:0,7,50	0/1:15,1:15:9.23:9,0,59	0/0:24,2:22:1.91:0,2,18	0/1:17,1:14:0.12:0,0,0	0/1:17,1:15:0.10:0,0,5	0/1:16,0:16:44.66:45,0,189	0/1:8,0:6:11.26:11,0,36	0/0:21,0:16:45.15:0,45,1494	0/0:41,0:41:99:0,108,3210	0/1:17,1:15:0:0,0,0	0/0:16,4:16:0:0,0,0	0/1:12,1:11:0:0,0,0	0/0:16,0:12:1.02:0,1,3	0/1:23,0:21:0:1,0,0	0/1:27,3:24:99:236,0,192	0/0:39,0:39:99:0,111,3371	0/1:6,1:4:15.83:63,0,16
chr10	88926635	.	CTG	C	1834.51	PASS	AB=0.825;AC=28;AF=0.538;AN=52;BaseQRankSum=7.076;DP=698;FS=6.085;HRun=0;HaplotypeScore=148.1616;InbreedingCoeff=0.2571;MQ=33.40;MQ0=16;MQRankSum=-6.555;QD=3.86;ReadPosRankSum=-2.779;VQSLOD=2.0444;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,4:37:2.18:0,2,9	0/1:22,3:24:99:113,0,114	./.	./.	0/0:12,10:17:0:0,0,0	1/1:4,11:13:14.98:179,15,0	1/1:17,9:19:5.85:57,6,0	0/1:81,0:68:99:314,0,524	0/0:20,4:23:23.14:0,23,139	0/1:47,9:46:99:360,0,271	0/1:33,2:29:21.02:38,0,21	1/1:10,14:16:8.70:73,9,0	1/1:10,6:16:20.04:159,20,0	1/1:12,13:21:3.97:39,4,0	0/1:4,16:16:0.12:0,0,0	1/1:6,12:15:6.43:62,6,0	0/1:14,1:15:76.80:83,0,77	1/1:6,3:7:0.16:6,0,0	0/0:21,0:16:45.13:0,45,765	0/0:41,0:41:99:0,111,1769	0/1:14,4:15:0:0,0,0	0/0:14,6:16:0:0,0,0	0/1:5,8:11:0.02:0,0,0	1/1:12,4:12:0.47:1,0,0	0/1:21,3:22:0.02:0,0,0	1/1:19,11:24:25.37:447,25,0	0/0:40,0:40:99:0,111,1704	0/1:5,3:5:1.19:45,0,1
chr10	88926647	.	C	CTG	267.61	PASS	AB=0.984;AC=8;AF=0.143;AN=56;BaseQRankSum=2.947;DP=773;FS=18.298;HRun=0;HaplotypeScore=171.7353;InbreedingCoeff=0.2794;MQ=33.85;MQ0=20;MQRankSum=-0.824;QD=1.24;ReadPosRankSum=-1.168;VQSLOD=1.4667;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:41,4:40:8.76:33,0,9	0/1:23,0:22:74.24:75,0,74	0/0:3,0:1:2.84:0,3,14	0/0:18,0:5:5.37:0,5,34	0/0:30,0:25:0:0,0,0	0/0:22,0:20:14.77:0,15,143	0/0:28,0:21:5.53:0,6,46	0/0:88,0:72:99:0,162,1522	1/1:22,4:24:25.87:213,26,0	0/1:58,1:48:59.32:59,0,581	0/0:31,1:27:5.67:0,6,29	0/0:27,0:19:6.90:0,7,76	0/0:23,0:22:24.35:0,24,240	0/0:31,0:26:5.61:0,6,53	0/1:26,0:22:0.01:0,0,0	0/0:20,0:17:6.25:0,6,64	0/1:15,0:15:1.13:1,0,101	0/0:8,0:6:3.48:0,3,44	0/0:27,0:19:54.15:0,54,708	0/0:35,0:35:75.18:0,75,984	0/0:20,0:17:0:0,0,0	0/0:27,0:22:0:0,0,0	0/0:17,0:15:0:0,0,0	0/0:18,0:14:0.47:0,0,2	0/1:21,0:19:0.25:0,0,0	0/0:29,0:23:53.21:0,53,562	0/0:41,0:40:99:0,115,1527	0/0:14,0:10:14.93:0,15,141
chr10	88926649	.	GTC	G	86.84	PASS	AB=0.959;AC=14;AF=0.259;AN=54;BaseQRankSum=0.625;DP=791;FS=1.787;HRun=0;HaplotypeScore=172.9620;InbreedingCoeff=-0.0020;MQ=33.63;MQ0=20;MQRankSum=-0.344;QD=0.19;ReadPosRankSum=-3.984;VQSLOD=1.5028;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:35,11:41:9.46:34,0,9	0/0:23,0:22:8.32:0,8,120	0/0:5,0:1:2.74:0,3,12	0/0:19,0:5:5.05:0,5,42	0/0:32,1:28:0:0,0,0	0/0:22,0:20:15.83:0,16,89	0/1:27,0:21:0.04:0,0,13	0/1:80,5:70:35.49:35,0,1573	0/1:24,3:25:2.98:3,0,154	0/1:59,0:48:51.97:52,0,914	0/1:34,0:29:12.84:13,0,46	0/1:28,0:20:18.07:18,0,54	0/0:22,0:21:13.48:0,13,211	0/0:32,0:27:4.17:0,4,47	0/1:27,0:23:0.12:0,0,0	0/0:20,0:17:5.38:0,5,34	0/1:13,0:13:22.99:23,0,155	0/0:8,0:6:5.81:0,6,60	0/0:28,0:20:57.19:0,57,932	0/0:33,0:33:69.22:0,69,1143	./.	0/1:29,1:25:0.01:0,0,1	0/1:17,1:16:0:0,0,0	0/0:18,0:14:1.24:0,1,3	1/1:18,4:20:2.81:25,3,0	0/1:32,1:27:4.30:4,0,406	0/0:40,0:39:99:0,111,1805	0/0:15,0:11:17.75:0,18,184
chr10	88926651	.	C	CTG	386.64	PASS	AB=0.946;AC=13;AF=0.232;AN=56;BaseQRankSum=2.109;DP=800;FS=26.913;HRun=0;HaplotypeScore=177.2465;InbreedingCoeff=0.2260;MQ=33.44;MQ0=22;MQRankSum=-0.085;QD=1.19;ReadPosRankSum=-2.412;VQSLOD=0.9803;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:40:7.20:54,0,7	0/1:19,4:22:54.60:55,0,190	0/0:7,0:1:3:0,3,26	0/0:22,0:4:5.50:0,6,41	0/0:36,0:31:0:0,0,0	0/1:22,0:20:1.60:2,0,199	0/0:28,0:22:5.95:0,6,59	0/0:86,0:70:99:0,166,2201	1/1:27,0:25:16.78:206,17,0	0/1:55,5:49:99:133,0,906	0/1:27,8:30:14.93:15,0,33	0/0:29,0:21:9.86:0,10,112	0/0:22,0:21:15.43:0,15,329	0/0:32,0:27:4.02:0,4,87	0/1:28,0:24:0.01:0,0,0	0/0:20,0:17:6.25:0,6,91	0/1:11,1:12:3.72:4,0,178	0/0:7,0:5:3.01:0,3,46	0/0:28,0:20:60.20:0,60,896	0/0:31,0:31:78.20:0,78,1104	0/1:22,0:19:0.13:0,0,0	0/1:30,0:25:0.01:0,0,0	0/0:18,0:16:0:0,0,0	0/0:17,0:14:1.25:0,1,3	1/1:23,0:21:5.72:48,6,0	0/0:33,0:27:61.84:0,62,769	0/0:39,0:38:99:0,111,1688	0/0:16,0:12:18.05:0,18,244
chr10	88926691	.	CTG	C	589.35	PASS	AB=0.939;AC=24;AF=0.462;AN=52;BaseQRankSum=10.177;DP=828;FS=5.009;HRun=0;HaplotypeScore=164.7971;InbreedingCoeff=0.7159;MQ=41.91;MQ0=32;MQRankSum=-8.216;QD=2.29;ReadPosRankSum=1.604;VQSLOD=2.2528;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:47:71.21:0,71,1108	0/0:16,2:17:24.10:0,24,371	0/0:43,0:4:9.03:0,9,146	0/0:81,1:18:9.73:0,10,254	./.	1/1:19,1:18:2.96:19,3,0	1/1:10,2:8:2.69:9,3,0	0/0:55,0:47:99:0,106,1965	0/0:30,0:29:44.33:0,44,813	0/0:58,4:55:13.17:0,13,1658	0/0:36,2:37:56.74:0,57,936	1/1:20,1:15:6.45:63,6,0	1/1:18,2:18:12.38:96,12,0	1/1:27,2:24:2.78:10,3,0	1/1:22,0:20:2.91:17,3,0	1/1:12,1:11:2.62:17,3,0	0/0:18,1:18:29.73:0,30,463	1/1:7,0:5:1.54:4,2,0	0/0:29,0:26:78.22:0,78,1404	0/0:33,0:33:96.28:0,96,1728	./.	0/1:23,2:22:0.01:0,0,0	0/1:19,1:19:0:0,0,0	1/1:11,1:9:1.82:5,2,0	0/0:23,0:22:26.60:0,27,520	1/1:35,1:33:58.54:412,59,0	0/0:37,0:36:99:0,111,2003	1/1:19,1:15:15.51:104,16,0
chr10	88926695	.	CTCTCTCCA	C	1943.05	PASS	AB=0.934;AC=24;AF=0.444;AN=54;BaseQRankSum=11.364;DP=814;FS=0.532;HRun=0;HaplotypeScore=197.7996;InbreedingCoeff=0.6446;MQ=41.43;MQ0=31;MQRankSum=-9.428;QD=6.27;ReadPosRankSum=-0.009;VQSLOD=2.0734;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:47:69.97:0,70,2444	0/0:19,0:18:15.33:0,15,760	0/0:46,0:3:9.03:0,9,287	0/0:83,0:18:23.49:0,23,454	0/0:28,6:31:0:0,0,0	1/1:18,2:18:2.61:12,3,0	1/1:11,0:9:5.34:27,5,0	0/0:51,0:44:99:0,108,3200	0/0:26,0:25:44.91:0,45,1320	0/1:57,0:50:99:146,0,3726	0/0:36,0:36:60.07:0,60,2106	1/1:19,1:15:11.93:150,12,0	1/1:19,3:20:20.82:261,21,0	1/1:26,1:22:4.15:38,4,0	0/1:17,3:19:0.02:0,0,0	1/1:13,0:11:4.68:31,5,0	0/1:19,0:18:1.77:2,0,1108	1/1:5,2:6:8.99:142,9,0	0/0:28,0:25:72.25:0,72,2581	0/0:35,0:35:96.33:0,96,3275	0/0:15,0:15:0:0,0,0	0/1:22,4:23:0.01:0,0,1	./.	1/1:13,1:11:2.79:17,3,0	0/0:23,0:22:26.83:0,27,1119	1/1:29,6:32:67.43:916,67,0	0/0:37,0:36:99:0,105,4111	1/1:16,3:14:23.64:377,24,0
chr10	88926697	.	C	CTG	248.31	PASS	AB=0.979;AC=18;AF=0.321;AN=56;BaseQRankSum=9.379;DP=804;FS=9.259;HRun=0;HaplotypeScore=163.8097;InbreedingCoeff=0.3567;MQ=41.80;MQ0=34;MQRankSum=-7.598;QD=0.87;ReadPosRankSum=2.862;VQSLOD=2.2695;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:46:76.40:0,76,954	0/1:16,2:17:10.88:11,0,309	0/0:47,0:3:9.03:0,9,126	0/0:81,0:18:11.57:0,12,253	0/0:33,0:29:0:0,0,0	0/0:18,0:16:0.47:0,0,2	1/1:11,0:9:5:31,5,0	0/0:49,0:44:99:0,111,1633	0/0:26,0:25:49.01:0,49,697	0/1:49,4:48:21.38:21,0,1430	0/0:31,3:34:60.10:0,60,866	1/1:20,0:16:6.44:49,6,0	0/1:23,0:21:0.03:53,0,0	1/1:27,0:22:2.35:21,2,0	0/1:20,0:19:0.01:0,0,0	0/0:13,0:11:3.41:0,3,19	0/0:19,1:19:18.91:0,19,432	1/1:5,0:5:6.27:24,6,0	0/0:32,0:26:78.25:0,78,1155	0/0:36,0:36:99:0,99,1471	0/1:14,0:14:0.13:0,0,0	0/1:26,0:23:0:0,0,0	0/0:20,0:19:0:0,0,0	1/1:13,0:11:1.14:3,1,0	0/0:23,0:22:27.09:0,27,413	0/1:34,0:31:31.11:142,0,31	0/0:37,0:36:99:0,111,1623	0/1:19,0:14:27.69:34,0,28
chr10	88926699	.	C	CTG	1207.01	PASS	AB=0.781;AC=21;AF=0.375;AN=56;BaseQRankSum=9.656;DP=791;FS=1.946;HRun=0;HaplotypeScore=159.8940;InbreedingCoeff=0.6851;MQ=42.01;MQ0=34;MQRankSum=-8.510;QD=5.80;ReadPosRankSum=1.506;VQSLOD=3.2125;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:48:76.52:0,77,959	0/0:17,0:16:22.47:0,22,332	0/0:44,0:3:9.03:0,9,122	0/0:78,0:18:2.46:0,2,243	0/0:22,11:29:0:0,0,0	1/1:10,7:15:0.34:0,0,0	1/1:6,4:8:5.44:101,5,0	0/0:47,0:43:99:0,111,1631	0/0:27,0:26:49.01:0,49,692	0/0:52,0:47:77.69:0,78,1537	0/0:33,0:33:60.10:0,60,866	1/1:12,9:16:9:121,9,0	1/1:11,12:21:7.90:196,8,0	1/1:13,13:21:2.81:57,3,0	0/0:13,7:19:0:0,0,0	1/1:5,8:11:7.34:60,7,0	0/0:20,0:19:33.76:0,34,445	1/1:6,1:6:11.13:92,11,0	0/0:33,0:25:75.24:0,75,1128	0/0:37,0:37:99:0,102,1496	0/0:6,5:11:0:0,0,0	0/1:18,7:22:0:0,0,0	0/0:15,4:18:0:0,0,0	1/1:10,4:11:1.14:3,1,0	0/0:23,0:22:30.08:0,30,438	1/1:21,12:30:31.28:609,31,0	0/0:36,0:35:99:0,108,1605	1/1:12,7:14:2.56:129,3,0
chr10	88926701	.	CCA	C	1269.06	PASS	AB=0.852;AC=24;AF=0.462;AN=52;BaseQRankSum=11.169;DP=747;FS=1.745;HRun=0;HaplotypeScore=148.8597;InbreedingCoeff=0.6544;MQ=42.88;MQ0=29;MQRankSum=-9.482;QD=4.45;ReadPosRankSum=0.512;VQSLOD=2.6970;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,4:48:74.78:0,75,1317	0/1:12,3:14:4.82:5,0,410	0/0:43,0:3:9.03:0,9,173	0/0:76,0:18:27.33:0,27,324	0/1:23,6:26:0:0,0,0	1/1:16,1:15:3:29,3,0	1/1:9,0:7:5.74:38,6,0	0/0:46,0:43:99:0,117,2216	0/0:23,2:24:50.83:0,51,810	0/1:46,4:45:39.26:39,0,2037	0/0:28,3:31:63.08:0,63,1191	1/1:17,1:14:11.70:131,12,0	1/1:18,4:20:18.53:160,19,0	1/1:22,1:20:4.25:19,4,0	./.	1/1:11,0:9:4.50:22,4,0	0/0:16,3:18:19.82:0,20,614	1/1:7,0:6:11.97:138,12,0	0/0:34,0:26:75.26:0,75,1491	0/0:38,0:38:99:0,108,2064	0/0:13,0:13:0:0,0,0	0/1:17,5:20:0.01:0,0,0	./.	1/1:11,1:10:2.37:8,2,0	0/0:15,6:20:30.10:0,30,600	1/1:24,7:28:68.21:642,68,0	0/0:35,0:34:99:0,105,2104	1/1:15,2:12:23.83:216,24,0
chr10	88926725	.	CTG	C	237.35	PASS	AB=0.781;AC=7;AF=0.130;AN=54;BaseQRankSum=6.781;DP=764;FS=16.944;HRun=0;HaplotypeScore=152.0399;InbreedingCoeff=-0.0826;MQ=41.16;MQ0=29;MQRankSum=-5.500;QD=1.81;ReadPosRankSum=-3.246;VQSLOD=0.3415;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:48:83.87:0,84,1564	0/0:15,0:14:2.44:0,2,383	0/0:52,0:6:7.98:0,8,134	0/0:71,0:14:17.38:0,17,142	0/0:30,7:34:27.04:0,27,481	0/1:10,5:13:23.11:23,0,107	0/0:9,0:7:3.71:0,4,60	0/0:42,0:40:99:0,108,1931	0/0:31,1:31:54.17:0,54,1026	0/0:50,1:48:42.70:0,43,2148	0/0:34,1:35:87.30:0,87,1637	0/1:13,6:16:48.62:49,0,233	0/1:13,6:18:49.37:49,0,103	0/1:15,7:19:7.38:7,0,159	./.	0/1:8,4:10:0:0,0,0	0/0:19,0:18:39.13:0,39,746	0/0:12,0:12:23.94:0,24,382	0/0:29,0:20:57.18:0,57,1061	0/0:33,0:33:81.14:0,81,1438	0/0:15,1:16:12.04:0,12,221	0/0:17,4:20:14.89:0,15,254	0/0:17,1:18:9.03:0,9,173	0/0:10,3:10:2.79:0,3,58	0/0:22,0:22:38.81:0,39,710	0/1:23,5:25:99:181,0,817	0/0:39,0:38:99:0,117,2017	0/1:13,3:11:45.90:46,0,321
chr10	88926777	.	CTCTCTGTCTT	C	2264.07	PASS	AB=0.934;AC=14;AF=0.269;AN=52;BaseQRankSum=3.399;DP=685;FS=9.428;HRun=0;HaplotypeScore=200.9218;InbreedingCoeff=0.6284;MQ=51.39;MQ0=18;MQRankSum=-1.824;QD=12.30;ReadPosRankSum=1.696;VQSLOD=1.9261;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:89.16:0,89,2916	0/0:12,0:12:30.01:0,30,884	0/1:24,0:12:22:22,0,167	0/1:49,0:12:3.39:3,0,185	0/0:34,0:33:77.43:0,77,2592	0/0:21,0:20:48.03:0,48,1322	0/0:25,0:24:55.79:0,56,971	0/0:32,0:27:65.94:0,66,1392	0/0:32,0:32:83.64:0,84,1717	0/0:36,0:34:90.25:0,90,2622	0/0:24,0:23:53.38:0,53,1686	0/0:26,0:20:52.03:0,52,789	1/1:3,14:17:6.02:107,6,0	0/0:27,0:26:49.23:0,49,862	./.	1/1:1,13:13:5.94:166,6,0	0/0:23,0:22:48.59:0,49,1139	1/1:12,0:12:30.03:694,30,0	0/0:28,0:22:63.22:0,63,2122	0/0:35,0:35:92.12:0,92,2578	1/1:20,0:20:21.07:591,21,0	0/0:23,0:23:56.41:0,56,1890	1/1:10,5:15:6.02:183,6,0	0/1:14,1:15:0.10:1,0,0	0/0:17,0:17:42.14:0,42,1624	0/1:12,4:14:77.86:659,0,78	0/0:32,0:32:87.29:0,87,3180	./.
chr10	88926783	.	GTCTT	G	533.64	PASS	AB=0.962;AC=13;AF=0.250;AN=52;BaseQRankSum=5.857;DP=682;FS=0.000;HRun=0;HaplotypeScore=158.7761;InbreedingCoeff=0.3202;MQ=50.83;MQ0=14;MQRankSum=-2.228;QD=2.74;ReadPosRankSum=1.104;VQSLOD=1.8915;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:99:0,110,2072	0/0:12,0:12:30.03:0,30,646	0/0:22,0:11:8.22:0,8,219	0/1:44,0:9:13.41:13,0,168	0/0:33,0:32:80.18:0,80,1971	0/0:21,0:20:48.03:0,48,909	0/0:26,0:25:59.99:0,60,942	0/1:29,8:32:99:143,0,1303	0/0:37,0:37:99:0,102,1631	0/0:38,0:35:99:0,99,2290	0/0:21,0:20:53.39:0,53,1299	0/0:26,0:20:52.07:0,52,789	1/1:17,0:17:1.20:4,1,0	0/0:28,0:27:51.96:0,52,631	./.	1/1:14,0:13:5.93:64,6,0	0/0:22,0:21:47.24:0,47,981	0/1:13,0:13:23.29:115,0,23	0/0:26,0:22:66.23:0,66,1686	0/0:35,0:35:97.88:0,98,2363	0/1:20,0:20:6.37:116,0,6	0/0:22,0:22:56.45:0,56,1290	1/1:14,0:14:6:57,6,0	1/1:15,0:15:0.38:1,0,0	0/0:17,0:17:45.15:0,45,1183	0/1:20,0:18:99:159,0,162	0/0:32,0:32:93.32:0,93,2373	./.
chr10	88926887	.	CTGTGTGTGTG	C	4454.90	PASS	AB=0.942;AC=29;AF=0.580;AN=50;BaseQRankSum=9.995;DP=530;FS=33.734;HRun=0;HaplotypeScore=175.4067;InbreedingCoeff=0.1947;MQ=42.18;MQ0=21;MQRankSum=-4.497;QD=14.37;ReadPosRankSum=-1.019;VQSLOD=2.3640;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,3:36:47.66:800,48,0	1/1:6,0:6:3.48:55,3,0	0/0:20,0:9:16.30:0,16,447	0/0:44,0:8:11.44:0,11,243	./.	1/1:8,0:7:6.02:124,6,0	0/1:19,0:21:15.67:102,0,16	0/1:39,0:34:99:915,0,192	1/1:2,11:13:0.47:1,0,0	1/1:11,0:11:10.12:594,10,0	0/0:23,0:23:0.47:0,0,1	1/1:23,0:23:2.76:354,3,0	0/1:12,0:13:7.38:274,0,7	1/1:22,0:25:17.85:198,18,0	1/1:15,0:15:6.49:115,6,0	0/1:17,0:17:46.65:224,0,47	0/1:20,0:19:78.87:82,0,79	0/1:12,0:11:29.57:202,0,30	0/0:25,0:19:57.19:0,57,2130	0/0:30,0:30:87.27:0,87,3248	./.	1/1:8,0:8:3.48:52,3,0	1/1:13,0:14:2.99:23,3,0	0/0:12,0:13:0.94:0,1,1	1/1:2,15:15:4.83:94,5,0	0/1:6,0:8:44.08:247,0,44	0/0:42,0:40:99:0,120,4806	./.
chr10	88926889	.	G	GTCTC	1889.92	PASS	AB=0.980;AC=34;AF=0.680;AN=50;BaseQRankSum=8.568;DP=525;FS=69.588;HRun=0;HaplotypeScore=159.1346;InbreedingCoeff=0.3319;MQ=43.88;MQ0=19;MQRankSum=-6.501;QD=5.01;ReadPosRankSum=-1.950;VQSLOD=0.1056;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,1:32:69.17:69,0,487	1/1:6,0:6:1.78:6,2,0	0/1:24,0:10:18.12:18,0,193	0/1:47,0:11:2.72:3,0,102	./.	1/1:7,0:6:5.89:64,6,0	1/1:17,2:19:9.32:88,9,0	1/1:37,0:33:7.45:219,7,0	0/0:12,0:12:0:0,0,0	0/1:12,0:12:56.02:56,0,94	1/1:23,0:23:0.21:0,0,0	1/1:21,3:23:29.01:276,29,0	1/1:10,2:12:25.34:260,25,0	1/1:22,3:25:16.81:207,17,0	1/1:12,3:14:6.74:65,7,0	1/1:15,2:17:20.75:242,21,0	0/1:21,0:20:10.73:11,0,34	1/1:11,0:10:3.60:124,4,0	0/0:23,0:19:54.17:0,54,961	0/0:30,0:30:84.27:0,84,1605	./.	1/1:8,1:8:2.51:49,3,0	1/1:12,1:13:3.01:48,3,0	0/1:12,1:13:0.06:0,0,0	0/0:18,0:16:6.02:0,6,98	1/1:9,0:8:23.42:236,23,0	0/0:42,0:40:99:0,117,2274	./.
chr10	88926891	.	GTGTGTGTCTC	G	5988.09	PASS	AB=0.879;AC=33;AF=0.660;AN=50;BaseQRankSum=9.720;DP=510;FS=49.504;HRun=0;HaplotypeScore=166.4291;InbreedingCoeff=0.5237;MQ=45.74;MQ0=20;MQRankSum=-6.633;QD=21.23;ReadPosRankSum=-1.097;VQSLOD=2.5052;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:0.37:81,0,0	1/1:0,6:6:3.01:91,3,0	0/0:27,0:10:17.95:0,18,444	0/0:49,0:12:16.01:0,16,359	./.	1/1:2,5:6:6.02:159,6,0	1/1:8,9:17:4.94:146,5,0	1/1:9,25:30:70.70:1673,71,0	1/1:12,0:12:0.47:1,0,0	1/1:0,12:12:33.10:1039,33,0	0/0:0,22:23:0.47:0,0,1	1/1:12,9:21:27.51:598,28,0	1/1:8,3:11:21.04:438,21,0	1/1:13,10:23:19.94:290,20,0	1/1:9,5:15:6.49:150,6,0	0/1:6,8:14:12.87:331,0,13	1/1:7,13:19:6.01:125,6,0	1/1:7,2:8:14.31:302,14,0	0/0:22,0:19:54.11:0,54,1950	0/0:30,0:30:87.28:0,87,3457	./.	1/1:5,2:7:3.48:51,3,0	1/1:6,7:13:2.99:24,3,0	0/0:8,3:12:0.94:0,1,1	0/1:18,0:16:30.25:30,0,62	1/1:5,3:7:10.66:461,11,0	0/0:41,0:39:99:0,117,4801	./.
chr10	88926897	.	GTC	G	473.20	PASS	AB=0.995;AC=26;AF=0.520;AN=50;BaseQRankSum=7.356;DP=497;FS=10.673;HRun=0;HaplotypeScore=145.6230;InbreedingCoeff=0.1647;MQ=48.13;MQ0=22;MQRankSum=-5.917;QD=1.64;ReadPosRankSum=-1.908;VQSLOD=1.7002;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:36.01:0,36,522	1/1:6,0:6:2.66:17,3,0	0/1:35,0:14:27.55:28,0,99	0/0:56,0:13:4.90:0,5,50	0/0:12,0:12:2.04:0,2,6	1/1:10,0:9:10.79:61,11,0	1/1:16,0:16:5.37:36,5,0	0/1:28,0:24:0.65:137,0,1	0/1:12,0:12:0:0,0,0	1/1:12,0:12:28.36:138,28,0	0/1:23,0:23:0:0,0,0	0/1:21,0:20:27.81:30,0,28	0/1:7,0:7:5.71:25,0,6	1/1:22,0:22:5.23:24,5,0	1/1:12,0:11:2.74:13,3,0	0/1:14,0:14:17.52:33,0,18	1/1:16,0:16:2.55:12,3,0	0/1:9,0:8:8.19:27,0,8	0/1:16,1:16:5.32:5,0,340	0/0:28,0:28:54.16:0,54,803	./.	0/1:7,0:6:0:0,0,0	./.	0/1:11,0:11:0:0,0,0	0/0:18,0:16:8.98:0,9,91	0/1:9,0:7:8.78:27,0,9	0/0:38,3:39:45.93:0,46,1139	./.
chr10	88927078	.	CA	C	2862.31	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=9.586;DP=589;FS=2.363;HRun=7;HaplotypeScore=55.7293;InbreedingCoeff=0.8502;MQ=63.04;MQ0=0;MQRankSum=2.126;QD=22.90;ReadPosRankSum=-1.670;VQSLOD=3.0997;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,108,1341	1/1:1,7:8:21.05:214,21,0	0/1:9,0:9:48.63:49,0,77	0/0:2,0:2:3:0,3,28	0/0:33,0:33:90.26:0,90,1106	0/0:13,0:12:36.10:0,36,439	0/0:10,0:10:30.10:0,30,377	1/1:5,30:35:90.18:910,90,0	0/0:24,0:24:63.20:0,63,792	1/1:5,29:33:84.19:857,84,0	1/1:2,19:21:57.13:582,57,0	0/0:16,0:15:33.11:0,33,415	0/0:17,0:17:51.16:0,51,640	0/0:22,0:22:63.16:0,63,773	0/0:26,0:26:66.21:0,66,830	0/0:18,0:18:51.16:0,51,641	1/1:3,15:18:42.09:428,42,0	0/0:26,0:26:66.21:0,66,830	0/0:11,0:11:27.08:0,27,327	0/0:33,0:33:81.26:0,81,1017	0/0:7,0:7:21.07:0,21,264	0/0:28,0:28:72.23:0,72,896	0/0:26,0:26:75.18:0,75,901	0/0:19,0:19:54.17:0,54,679	0/0:34,0:34:99:0,99,1244	0/0:23,0:23:69.22:0,69,866	0/0:27,0:27:81.25:0,81,1002	0/0:9,0:9:27.09:0,27,340
chr10	88927657	.	ACATG	A	3439.20	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.493;DP=764;FS=1.582;HRun=0;HaplotypeScore=125.8089;InbreedingCoeff=0.9998;MQ=85.09;MQ0=0;MQRankSum=-4.350;QD=38.21;ReadPosRankSum=3.181;VQSLOD=3.8532;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,37:38:71.96:1295,72,0	0/0:20,0:20:60.19:0,60,1572	0/0:25,0:25:69.20:0,69,1647	0/0:27,0:27:71.25:0,71,1698	0/0:22,0:22:63.20:0,63,1655	0/0:31,0:30:93.25:0,93,2325	0/0:22,0:22:66.21:0,66,1699	0/0:33,0:33:93.32:0,93,2442	1/1:2,26:28:63.22:1206,63,0	0/0:34,0:34:96.32:0,96,2552	0/0:18,0:18:54.19:0,54,1433	0/0:36,0:36:99:0,99,2609	0/0:39,0:39:99:0,117,3051	0/0:26,0:26:75.26:0,75,2002	0/0:42,0:42:99:0,126,3358	0/0:20,0:20:60.21:0,60,1614	0/0:25,0:25:69.24:0,69,1889	0/0:17,0:17:51.15:0,51,1324	0/0:28,0:28:81.23:0,81,1907	0/0:30,0:30:90.31:0,90,2378	0/0:44,0:43:99:0,129,3291	0/0:22,0:22:63.22:0,63,1679	0/0:15,0:15:45.15:0,45,1230	0/0:28,0:28:84.27:0,84,2190	1/1:1,23:24:56.94:938,57,0	0/0:30,0:30:87.30:0,87,2339	0/0:30,0:29:90.29:0,90,2335	0/0:10,0:10:30.07:0,30,704
chr10	88927758	.	ATG	A	5232.68	PASS	AB=0.848;AC=23;AF=0.411;AN=56;BaseQRankSum=9.052;DP=817;FS=6.799;HRun=0;HaplotypeScore=115.2330;InbreedingCoeff=0.3520;MQ=60.99;MQ0=14;MQRankSum=2.268;QD=11.40;ReadPosRankSum=4.634;VQSLOD=3.6956;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:38:23.63:0,24,252	0/1:16,1:17:1.72:2,0,435	0/0:32,0:15:18.06:0,18,269	0/0:31,0:14:6.49:0,6,89	0/1:30,3:34:14.58:15,0,865	0/0:18,1:19:1.27:0,1,453	0/0:27,0:29:34.01:0,34,685	0/0:31,0:28:45.08:0,45,516	0/0:22,1:33:18.30:0,18,407	0/0:34,1:35:26.60:0,27,853	0/1:21,3:27:80.70:81,0,680	0/0:27,2:28:19.35:0,19,760	1/1:11,26:38:69.04:780,69,0	0/0:28,2:29:25.37:0,25,837	1/1:7,26:32:69.20:801,69,0	1/1:8,18:28:44.97:502,45,0	0/1:29,2:29:18.57:19,0,641	0/1:5,9:14:9.31:283,0,9	0/1:24,0:23:13.81:14,0,233	0/0:30,0:30:47.76:0,48,1047	1/1:18,27:47:62.51:648,63,0	0/1:26,4:30:17.58:18,0,776	0/1:8,13:23:4.89:390,0,5	1/1:14,19:33:56.75:641,57,0	0/0:9,0:20:11.69:0,12,104	1/1:7,16:26:33.50:489,33,0	0/1:28,2:30:15.49:15,0,673	1/1:5,15:20:47.97:536,48,0
chr10	88932508	.	G	GTC	6916.99	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=10.908;DP=584;FS=15.335;HRun=0;HaplotypeScore=145.2341;InbreedingCoeff=0.7195;MQ=50.17;MQ0=15;MQRankSum=-0.502;QD=15.14;ReadPosRankSum=4.098;VQSLOD=3.8177;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:45.09:779,45,0	1/1:10,0:10:21.05:217,21,0	0/0:24,0:8:12.04:0,12,157	0/0:39,0:15:20.32:0,20,276	0/1:24,0:24:9.79:72,0,10	1/1:14,0:14:9.02:94,9,0	1/1:31,0:31:33.87:299,34,0	1/1:28,0:27:61.56:705,62,0	1/1:3,11:13:27.09:468,27,0	1/1:19,0:19:35.32:344,35,0	1/1:17,0:17:18.04:182,18,0	1/1:27,0:25:11.16:287,11,0	1/1:16,0:16:30.07:311,30,0	0/1:23,0:23:27.79:102,0,28	1/1:22,0:21:11.22:310,11,0	1/1:15,0:15:21.05:222,21,0	1/1:33,0:33:36.56:392,37,0	1/1:19,0:19:39.09:411,39,0	0/0:25,0:23:45.10:0,45,544	0/0:14,0:14:30.10:0,30,395	1/1:27,0:26:24.06:251,24,0	1/1:10,0:10:5.87:81,6,0	1/1:17,0:17:36.08:378,36,0	1/1:17,0:17:12.03:129,12,0	1/1:7,16:23:21.06:351,21,0	1/1:21,0:20:48.94:482,49,0	0/0:25,0:24:57.18:0,57,741	1/1:2,0:2:5.95:53,6,0
chr10	88932514	.	C	CTG	10687.68	PASS	AB=0.933;AC=45;AF=0.804;AN=56;BaseQRankSum=6.505;DP=582;FS=10.838;HRun=0;HaplotypeScore=135.1410;InbreedingCoeff=0.7887;MQ=48.57;MQ0=15;MQRankSum=0.164;QD=23.13;ReadPosRankSum=4.860;VQSLOD=5.2294;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:45.05:430,45,0	1/1:0,8:8:21.07:384,21,0	0/0:24,0:9:20.99:0,21,241	0/0:37,0:14:33.44:0,33,380	1/1:11,11:22:23.98:275,24,0	1/1:1,13:14:8.77:160,9,0	1/1:2,27:30:25.54:534,26,0	1/1:4,30:33:95.97:1349,96,0	0/1:13,0:13:10.88:210,0,11	1/1:2,17:19:48.05:719,48,0	1/1:2,13:15:18.06:329,18,0	1/1:2,23:23:33.11:547,33,0	1/1:3,17:20:30.10:548,30,0	1/1:2,20:22:15:218,15,0	1/1:1,20:20:33.11:604,33,0	1/1:0,14:14:21.07:383,21,0	1/1:2,30:32:41.96:691,42,0	1/1:1,20:21:38.76:713,39,0	0/0:22,0:20:51.07:0,51,650	0/0:15,0:15:38.92:0,39,435	1/1:2,25:26:24.08:440,24,0	1/1:8,4:12:8.87:119,9,0	1/1:1,18:19:36.12:656,36,0	1/1:0,17:17:12.04:220,12,0	1/1:19,0:21:0.16:157,0,0	1/1:4,21:23:54.13:907,54,0	0/0:22,0:21:63.16:0,63,843	1/1:1,1:2:6.02:96,6,0
chr10	88932535	.	TCTCTCC	T	1183.03	PASS	AB=0.900;AC=11;AF=0.196;AN=56;BaseQRankSum=-0.183;DP=528;FS=6.164;HRun=0;HaplotypeScore=195.7379;InbreedingCoeff=0.2118;MQ=48.96;MQ0=6;MQRankSum=-4.726;QD=5.97;ReadPosRankSum=-3.301;VQSLOD=1.1871;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:24.77:0,25,1007	0/0:6,0:6:5.89:0,6,92	0/0:25,0:14:26.62:0,27,923	0/0:37,0:24:48.07:0,48,1376	0/0:5,9:14:2.92:0,3,36	0/1:8,6:13:6.32:19,0,6	0/1:10,13:22:1.36:224,0,1	0/1:31,0:26:49.33:220,0,49	0/0:11,0:10:23.75:0,24,624	0/1:16,0:15:49.71:50,0,199	0/0:12,0:12:15.05:0,15,234	1/1:10,11:20:24.06:395,24,0	0/0:17,0:17:16.12:0,16,247	1/1:7,12:18:12.04:220,12,0	0/0:20,0:20:39.06:0,39,545	0/0:14,0:14:14.01:0,14,180	0/1:25,1:25:46.06:46,0,406	0/1:19,0:19:61.41:61,0,489	0/0:26,0:26:66.21:0,66,1738	0/0:14,0:14:42.13:0,42,1169	0/0:27,0:25:15.05:0,15,238	0/0:2,7:9:1.90:0,2,6	0/0:21,0:21:4.74:0,5,403	0/0:14,0:14:8.95:0,9,142	0/0:13,0:13:18.01:0,18,419	0/1:29,0:25:99:101,0,285	0/0:21,0:20:63.19:0,63,1768	0/0:2,0:2:6.02:0,6,118
chr10	88932537	.	TCTCC	T	460.63	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=2.096;DP=540;FS=8.376;HRun=0;HaplotypeScore=187.9198;InbreedingCoeff=0.1503;MQ=48.17;MQ0=6;MQRankSum=-3.617;QD=1.88;ReadPosRankSum=-5.210;VQSLOD=-0.6181;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:27:26.59:0,27,797	0/1:5,0:5:15.94:16,0,53	0/0:24,0:14:39.11:0,39,900	0/0:40,0:26:68.72:0,69,1356	0/0:14,0:14:2.93:0,3,24	1/1:15,0:13:0.23:20,0,0	0/1:21,0:20:0.96:98,0,1	0/1:35,0:30:99:114,0,374	0/0:12,0:11:26.05:0,26,518	0/1:17,0:16:29.76:30,0,234	0/0:12,0:12:15.04:0,15,157	1/1:18,3:20:23.93:191,24,0	0/1:15,0:15:3.65:4,0,183	1/1:19,0:18:11.97:94,12,0	0/0:19,0:19:39:0,39,374	0/1:14,0:14:12.12:12,0,123	0/1:26,0:25:6.57:7,0,279	0/0:19,0:19:18.48:0,18,411	0/0:26,0:26:65.69:0,66,1468	0/0:14,0:14:42.13:0,42,1026	0/0:27,0:25:15.04:0,15,163	0/0:9,0:9:1.72:0,2,6	0/1:26,0:26:16.33:16,0,255	0/0:14,0:14:8.94:0,9,96	0/0:13,0:13:18.01:0,18,341	0/1:31,0:27:15.93:16,0,384	0/0:23,0:22:63.65:0,64,1455	0/0:2,0:2:6.02:0,6,81
chr10	88932557	.	C	CGTGTGTGTGTGT	6963.09	PASS	AB=1.000;AC=43;AF=0.827;AN=52;BaseQRankSum=2.085;DP=583;FS=4.916;HRun=0;HaplotypeScore=240.6297;InbreedingCoeff=0.4443;MQ=46.43;MQ0=7;MQRankSum=-3.658;QD=15.34;ReadPosRankSum=-3.957;VQSLOD=2.9505;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:33:20.38:402,20,0	1/1:5,0:5:6.02:118,6,0	./.	0/0:33,0:21:3.01:0,3,44	0/0:16,0:16:0:0,0,0	1/1:26,0:23:14.97:452,15,0	1/1:28,0:25:24.03:391,24,0	1/1:38,0:31:33.04:565,33,0	1/1:12,0:11:6:159,6,0	1/1:21,0:20:22.10:802,22,0	./.	1/1:19,0:19:9.02:147,9,0	1/1:14,0:14:1.36:2,1,0	1/1:20,0:19:3.01:97,3,0	1/1:12,2:15:3.01:44,3,0	1/1:18,1:19:11.97:280,12,0	1/1:30,0:29:23.77:1100,24,0	1/1:13,1:14:15.05:754,15,0	0/1:22,0:23:15.43:15,0,586	0/0:16,0:18:29.96:0,30,704	1/1:25,0:22:1.74:73,2,0	1/1:13,0:13:2.56:96,3,0	1/1:20,0:21:2.69:50,3,0	1/1:17,0:17:2.25:23,2,0	1/1:18,0:18:14.58:196,15,0	1/1:35,0:31:30.10:859,30,0	0/0:21,0:23:43.75:0,44,1235	1/1:2,2:6:6.02:336,6,0
chr10	88933099	.	CAG	C	268.07	PASS	AB=0.860;AC=4;AF=0.071;AN=56;BaseQRankSum=2.885;DP=824;FS=3.823;HRun=0;HaplotypeScore=221.8809;InbreedingCoeff=-0.0855;MQ=56.11;MQ0=10;MQRankSum=-5.037;QD=2.39;ReadPosRankSum=-5.431;VQSLOD=0.5725;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:26.24:0,26,398	0/0:4,0:4:12.03:0,12,189	0/0:39,2:21:41.75:0,42,530	0/0:52,2:24:38.75:0,39,526	0/0:29,1:29:39.50:0,39,698	0/0:34,7:39:33.22:0,33,875	0/1:24,2:22:99:105,0,564	0/1:55,6:57:99:195,0,1731	0/0:30,0:29:38.22:0,38,576	0/0:41,0:41:99:0,114,1968	0/0:30,0:30:81.28:0,81,1466	0/0:33,4:36:22.11:0,22,912	0/0:22,1:23:54.17:0,54,947	0/1:16,2:17:16.11:16,0,256	0/0:22,3:25:32.31:0,32,517	0/0:23,2:24:15.85:0,16,736	0/0:30,0:30:75.26:0,75,1332	0/0:19,0:18:52.05:0,52,730	0/0:16,0:15:39.13:0,39,696	0/0:25,0:25:69.24:0,69,1234	0/0:9,0:9:9.03:0,9,156	0/0:30,1:29:51.14:0,51,864	0/0:21,3:23:30.09:0,30,503	0/0:26,2:28:20.98:0,21,313	0/0:37,0:37:5.51:0,6,462	0/0:36,1:36:41.98:0,42,1369	0/0:45,0:45:99:0,135,2425	0/1:4,3:6:60.47:60,0,98
chr10	88933101	.	G	GAGACAGAGAC	5856.93	PASS	AB=0.625;AC=35;AF=0.625;AN=56;BaseQRankSum=9.450;DP=843;FS=3.488;HRun=0;HaplotypeScore=303.3799;InbreedingCoeff=0.7547;MQ=54.83;MQ0=11;MQRankSum=-7.865;QD=10.75;ReadPosRankSum=-3.634;VQSLOD=2.7337;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,19:34:18.12:89,0,18	0/0:4,0:4:9.02:0,9,179	0/0:42,0:21:2.96:0,3,68	0/0:55,0:22:3.01:0,3,42	1/1:29,0:28:12.12:111,12,0	1/1:42,0:40:17.95:183,18,0	1/1:26,0:22:32.89:560,33,0	1/1:63,0:59:79.37:1029,79,0	1/1:10,20:32:6.02:299,6,0	0/0:41,0:41:87.26:0,87,2098	0/0:31,0:31:51.16:0,51,1268	1/1:37,0:36:17.21:226,17,0	1/1:25,0:25:30.02:420,30,0	1/1:18,0:17:15.04:189,15,0	1/1:26,0:26:21.06:325,21,0	1/1:25,0:24:27.32:340,27,0	0/0:29,0:29:62.97:0,63,1523	1/1:21,0:20:6.46:239,6,0	0/0:17,0:16:18.05:0,18,371	0/0:24,0:24:36.12:0,36,917	0/0:10,0:10:3.01:0,3,45	1/1:31,0:29:6.26:378,6,0	1/1:24,0:23:6:52,6,0	1/1:27,0:27:11.52:132,12,0	1/1:9,28:42:18.04:675,18,0	1/1:34,0:33:41.22:503,41,0	0/0:45,0:45:87.26:0,87,2419	1/1:7,0:6:9.03:107,9,0
chr10	88933129	.	G	GAC	2728.37	PASS	AB=0.800;AC=16;AF=0.286;AN=56;BaseQRankSum=9.135;DP=804;FS=3.535;HRun=0;HaplotypeScore=227.2175;InbreedingCoeff=-0.4050;MQ=48.74;MQ0=12;MQRankSum=-6.272;QD=5.88;ReadPosRankSum=-1.340;VQSLOD=2.8884;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:18.27:0,18,378	0/0:6,0:6:18.06:0,18,274	0/0:36,0:16:37.10:0,37,550	0/0:53,0:16:35.47:0,35,485	0/1:16,9:24:79.89:80,0,137	0/1:33,8:39:69.44:69,0,501	0/1:20,4:20:99:235,0,290	0/1:44,11:51:99:544,0,902	0/1:27,0:26:32.50:65,0,33	0/0:46,0:46:99:0,132,1994	0/0:31,0:31:75.19:0,75,1093	0/1:24,12:35:99:194,0,379	0/1:13,8:21:99:223,0,299	0/1:10,10:19:61.93:62,0,206	0/1:17,9:26:99:224,0,236	0/1:18,9:26:99:177,0,200	0/0:32,0:32:81.27:0,81,1233	0/1:13,5:17:99:107,0,371	0/0:16,0:15:45.11:0,45,644	0/0:23,0:23:63.21:0,63,959	0/0:12,2:14:9.03:0,9,138	0/1:25,5:27:99:232,0,300	0/1:14,8:22:16.87:17,0,272	0/1:16,8:24:93.87:94,0,138	0/1:37,0:37:99:162,0,223	0/1:22,9:30:99:403,0,543	0/0:37,0:37:99:0,102,1494	0/0:16,1:17:16.19:0,16,609
chr10	88933135	.	GAA	G	115.58	PASS	AB=0.821;AC=9;AF=0.161;AN=56;BaseQRankSum=7.614;DP=789;FS=7.070;HRun=3;HaplotypeScore=236.7449;InbreedingCoeff=-0.1813;MQ=48.54;MQ0=9;MQRankSum=-7.425;QD=0.44;ReadPosRankSum=1.568;VQSLOD=-0.4522;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:38.37:0,38,590	0/0:7,0:7:21.03:0,21,367	0/0:38,0:19:50.34:0,50,813	0/0:49,0:18:39.32:0,39,676	0/0:14,9:22:21.47:0,21,359	0/0:36,8:42:56.66:0,57,1086	0/1:20,1:17:8.92:9,0,435	0/1:45,6:48:8.24:8,0,1630	0/0:27,0:26:31.99:0,32,414	0/0:44,0:44:99:0,120,2317	0/0:30,0:30:87.01:0,87,1441	0/1:26,9:34:51.22:51,0,696	0/1:15,7:22:26.63:27,0,558	0/0:13,7:19:4.02:0,4,359	0/1:19,7:26:1.33:1,0,479	0/1:14,9:22:13.70:14,0,441	0/0:32,0:32:65.27:0,65,1527	0/0:20,3:21:28.35:0,28,706	0/0:16,0:15:45.15:0,45,860	0/0:23,0:23:69.22:0,69,1262	0/0:13,2:15:17.98:0,18,272	0/1:23,3:23:21.59:22,0,570	0/0:13,8:21:28.31:0,28,532	0/1:19,7:26:22.34:22,0,389	0/0:33,0:33:40.08:0,40,560	0/1:22,7:28:93.09:93,0,837	0/0:36,0:36:99:0,108,2039	0/0:19,1:20:42.83:0,43,960
chr10	88933173	.	GAGAC	G	11922.67	PASS	AB=0.550;AC=30;AF=0.536;AN=56;BaseQRankSum=7.912;DP=736;FS=0.321;HRun=0;HaplotypeScore=171.3421;InbreedingCoeff=0.8855;MQ=57.93;MQ0=11;MQRankSum=-1.695;QD=31.79;ReadPosRankSum=2.579;VQSLOD=4.5932;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.12:0,60,1328	0/0:13,0:13:39.13:0,39,980	0/0:43,0:14:26.98:0,27,544	0/0:75,0:31:10.35:0,10,780	1/1:5,17:22:30.13:516,30,0	1/1:7,39:46:80.04:1410,80,0	1/1:6,3:9:21.01:299,21,0	1/1:6,39:44:39.52:1625,40,0	0/0:24,0:24:50.76:0,51,1178	0/0:28,0:28:81.27:0,81,2015	0/0:28,0:28:78.27:0,78,1799	1/1:3,23:26:50.98:760,51,0	1/1:2,16:18:42.10:733,42,0	1/1:2,14:16:23.11:388,23,0	1/1:2,16:18:32.96:468,33,0	1/1:7,10:17:27.01:426,27,0	0/0:26,0:26:67.67:0,68,1609	0/1:3,17:20:1.34:635,0,1	0/0:19,0:17:51.17:0,51,1229	0/0:26,0:26:78.08:0,78,1869	1/1:2,20:22:30.02:481,30,0	1/1:3,19:22:45.07:757,45,0	1/1:0,16:16:41.96:631,42,0	1/1:9,17:26:35.64:583,36,0	0/0:23,0:23:45.09:0,45,1049	0/1:6,22:28:10:1055,0,10	0/0:32,0:32:87.27:0,87,1908	1/1:0,24:24:63.22:1156,63,0
chr10	88933400	.	TTTC	T	6142.96	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=6.325;DP=547;FS=3.843;HRun=0;HaplotypeScore=156.6896;InbreedingCoeff=0.7943;MQ=75.53;MQ0=0;MQRankSum=-5.181;QD=19.08;ReadPosRankSum=0.577;VQSLOD=4.2909;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.12:0,63,1258	1/1:0,5:5:15:223,15,0	0/0:12,0:13:19.40:0,19,290	0/0:12,0:13:10.69:0,11,153	0/1:23,0:23:12.19:12,0,83	0/0:21,0:21:21.27:0,21,122	0/1:10,0:10:8.08:8,0,48	1/1:0,19:19:57.14:834,57,0	0/0:16,0:16:45.15:0,45,962	1/1:1,24:25:72.19:1087,72,0	1/1:0,24:24:69.19:1143,69,0	0/0:16,0:16:22.03:0,22,61	1/1:18,0:18:46.09:211,46,0	0/0:14,0:14:22.39:0,22,71	1/1:14,0:14:30.94:148,31,0	1/1:16,1:17:33.73:191,34,0	1/1:1,26:27:60.21:1022,60,0	1/1:15,0:15:22.24:108,22,0	0/0:20,0:20:57.19:0,57,1161	0/0:36,0:36:99:0,105,2156	1/1:17,0:17:28.21:141,28,0	0/1:17,0:17:9.23:9,0,52	1/1:18,0:18:39.15:187,39,0	1/1:18,0:18:33.64:159,34,0	0/0:23,0:23:66.23:0,66,1407	1/1:26,2:28:65.96:413,66,0	0/0:30,0:30:84.25:0,84,1697	1/1:27,0:27:38:248,38,0
chr10	88933401	.	TTC	T	8985.53	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=14.106;DP=543;FS=6.024;HRun=0;HaplotypeScore=136.5795;InbreedingCoeff=0.9445;MQ=74.92;MQ0=0;MQRankSum=-2.377;QD=24.15;ReadPosRankSum=1.386;VQSLOD=5.2779;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.12:0,63,1025	1/1:5,0:5:14.94:119,15,0	0/0:11,0:12:25.97:0,26,261	0/0:12,0:13:0.69:0,1,128	1/1:23,0:23:37.46:210,37,0	1/1:18,1:19:14.95:168,15,0	1/1:10,0:10:9.60:88,10,0	1/1:19,0:19:56.93:473,57,0	0/0:16,0:16:45.15:0,45,778	1/1:25,0:25:71.89:594,72,0	1/1:24,0:24:68.89:570,69,0	1/1:16,0:16:36.25:138,36,0	1/1:1,17:18:51.17:770,51,0	1/1:14,0:14:33.27:140,33,0	1/1:0,14:14:33.07:478,33,0	1/1:1,16:17:36.11:530,36,0	1/1:27,0:27:59.93:501,60,0	1/1:1,14:15:29.69:421,30,0	0/0:19,0:19:57.18:0,57,937	0/0:35,0:35:99:0,105,1705	1/1:1,16:17:32.98:426,33,0	1/1:16,1:17:37.45:158,37,0	1/1:0,18:18:42.09:612,42,0	1/1:0,18:18:36.34:524,36,0	0/0:23,0:23:66.23:0,66,1136	1/1:4,24:28:83.73:1073,84,0	0/0:30,0:30:87.24:0,87,1399	1/1:8,20:28:71.65:993,72,0
chr10	88933402	.	TC	T	8469.80	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=14.293;DP=540;FS=6.739;HRun=1;HaplotypeScore=127.7626;InbreedingCoeff=0.9941;MQ=72.70;MQ0=0;MQRankSum=-3.212;QD=22.77;ReadPosRankSum=1.100;VQSLOD=4.6020;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.12:0,63,815	1/1:5,0:5:14.78:95,15,0	0/0:12,0:11:27.48:0,27,226	0/0:10,0:11:15.50:0,16,107	1/1:4,19:23:63.93:845,64,0	1/1:3,16:19:46.70:683,47,0	1/1:2,8:10:25.51:359,26,0	1/1:19,0:19:56.45:405,56,0	0/0:15,0:15:45.15:0,45,613	1/1:25,0:25:71.09:482,71,0	1/1:24,0:24:68:441,68,0	1/1:0,16:16:42.14:585,42,0	1/1:17,1:18:50.37:352,50,0	1/1:3,12:15:45.08:568,45,0	1/1:14,0:14:32.73:232,33,0	1/1:17,0:17:35.69:253,36,0	1/1:26,0:26:59.12:383,59,0	1/1:14,1:15:29.78:231,30,0	0/0:20,0:20:59.77:0,60,760	0/0:35,0:35:99:0,105,1349	1/1:16,0:16:32.71:229,33,0	1/1:1,16:17:50.96:602,51,0	1/1:18,0:18:41.64:292,42,0	1/1:18,0:18:36.17:254,36,0	0/0:23,0:23:66.22:0,66,893	1/1:26,2:28:83.41:626,83,0	0/0:30,0:30:87.12:0,87,1105	1/1:28,1:29:74.45:553,74,0
chr10	88934136	.	TA	T	14015.99	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=11.234;DP=677;FS=9.791;HRun=5;HaplotypeScore=73.6203;InbreedingCoeff=0.9994;MQ=71.43;MQ0=1;MQRankSum=-2.865;QD=29.69;ReadPosRankSum=3.838;VQSLOD=5.0944;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,42:45:99:1225,108,0	0/0:8,0:8:24.08:0,24,328	0/0:32,0:30:73.25:0,73,993	0/0:19,0:18:35.79:0,36,481	1/1:2,21:23:57.16:647,57,0	1/1:1,18:19:54.15:613,54,0	1/1:0,18:18:48.14:544,48,0	1/1:4,22:26:66.13:717,66,0	1/1:1,24:25:72.20:817,72,0	0/0:30,0:30:75.17:0,75,948	0/0:18,0:18:54.18:0,54,737	1/1:0,22:22:63.18:715,63,0	1/1:1,23:24:63.18:714,63,0	1/1:1,21:22:60.17:681,60,0	1/1:3,25:28:69.19:783,69,0	1/1:0,15:15:36.10:408,36,0	0/0:35,0:35:99:0,99,1354	1/1:0,34:34:99:1123,99,0	0/0:18,0:17:45.15:0,45,615	0/0:16,0:16:45.15:0,45,615	1/1:3,32:35:90.26:1021,90,0	1/1:1,14:15:39.11:442,39,0	1/1:1,15:16:42.12:476,42,0	1/1:4,35:39:93.26:1055,93,0	1/1:0,30:30:87.25:987,87,0	1/1:3,23:26:31.15:742,31,0	0/0:28,0:27:78.23:0,78,1035	1/1:1,9:10:27.08:306,27,0
chr10	88934282	.	AC	A	1314.48	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.646;DP=494;FS=8.886;HRun=8;HaplotypeScore=77.4361;InbreedingCoeff=0.9730;MQ=81.47;MQ0=5;MQRankSum=-3.859;QD=18.51;ReadPosRankSum=-1.549;VQSLOD=2.5843;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,33:41:59.65:704,60,0	0/0:6,0:6:15.05:0,15,179	0/0:33,2:22:46.31:0,46,498	0/0:36,0:24:58.47:0,58,579	0/0:13,0:13:30.03:0,30,333	0/0:19,0:19:48.13:0,48,563	0/0:23,0:23:60.18:0,60,721	0/0:26,0:26:57.17:0,57,688	1/1:0,17:17:51.08:492,51,0	0/0:12,0:12:24.06:0,24,279	0/0:10,0:10:15.04:0,15,169	0/0:19,0:19:51.13:0,51,592	0/0:11,0:11:22.71:0,23,273	0/0:9,0:9:21.06:0,21,254	0/0:14,0:14:39.06:0,39,443	0/0:13,0:13:20.96:0,21,253	0/0:26,0:26:72.20:0,72,857	0/0:13,0:13:30.08:0,30,354	0/0:10,0:10:21.04:0,21,240	0/0:9,0:9:15.05:0,15,181	0/0:29,0:29:72.20:0,72,846	0/0:10,0:10:23.91:0,24,240	0/0:12,0:12:24.07:0,24,289	0/0:29,0:29:60.18:0,60,724	1/1:0,12:12:27.04:260,27,0	0/0:11,0:11:21.06:0,21,253	0/0:18,0:18:45.14:0,45,543	0/0:9,0:9:24.07:0,24,290
chr10	88934298	.	GCA	G	1921.38	PASS	AB=0.708;AC=30;AF=0.556;AN=54;BaseQRankSum=-1.728;DP=521;FS=4.748;HRun=0;HaplotypeScore=95.3872;InbreedingCoeff=0.6200;MQ=64.53;MQ0=18;MQRankSum=-0.083;QD=7.39;ReadPosRankSum=2.118;VQSLOD=2.6717;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:13.50:0,14,245	1/1:4,0:7:3.73:16,4,0	0/0:36,0:13:0:0,0,0	0/0:30,0:14:0:0,0,0	0/0:13,0:20:18:0,18,171	0/0:14,0:25:14.98:0,15,126	0/0:21,0:32:31.57:0,32,304	0/0:20,0:24:1.29:0,1,6	0/0:18,0:18:26.20:0,26,138	1/1:9,1:12:13.76:80,14,0	./.	0/0:14,0:23:53.03:0,53,533	1/1:6,6:12:15.04:166,15,0	0/0:4,0:7:9:0,9,79	0/1:10,5:16:27.21:126,0,27	1/1:5,9:15:11.86:113,12,0	1/1:19,0:30:36.93:181,37,0	0/1:11,9:19:35.64:215,0,36	1/1:8,0:10:2.84:14,3,0	1/1:8,0:9:2.84:14,3,0	1/1:17,6:25:20.72:194,21,0	0/0:2,0:5:6:0,6,52	1/1:8,2:12:17.71:152,18,0	1/1:17,10:29:26.34:393,26,0	1/1:10,3:14:17.83:165,18,0	1/1:9,0:9:5.85:47,6,0	1/1:9,0:23:33.62:162,34,0	1/1:9,2:10:6.02:66,6,0
chr10	88934300	.	A	ACG	1203.61	PASS	AB=0.980;AC=11;AF=0.196;AN=56;BaseQRankSum=4.257;DP=529;FS=4.660;HRun=0;HaplotypeScore=102.5256;InbreedingCoeff=0.1506;MQ=62.19;MQ0=21;MQRankSum=0.618;QD=6.58;ReadPosRankSum=1.844;VQSLOD=3.0384;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:30,6:35:41.95:433,0,42	0/0:7,0:7:11.96:0,12,94	0/0:37,0:12:31.54:0,32,276	0/0:31,0:13:29.95:0,30,275	0/1:21,0:21:44.20:44,0,185	0/1:22,0:22:23.12:23,0,230	0/1:33,0:33:99:111,0,261	0/0:23,0:23:56.85:0,57,482	1/1:12,8:20:6.70:452,7,0	0/0:14,0:11:29.92:0,30,222	0/0:3,0:3:3:0,3,25	0/1:24,0:24:99:168,0,258	0/0:13,0:13:28.96:0,29,217	0/1:7,0:7:39.03:39,0,78	0/0:16,0:16:35.94:0,36,312	0/0:15,0:15:26.93:0,27,215	0/0:30,0:30:74.67:0,75,584	0/0:20,0:19:47.61:0,48,372	0/0:11,0:10:29.65:0,30,236	0/0:12,0:10:22.72:0,23,164	0/0:27,0:26:62.76:0,63,492	0/1:5,0:5:11.92:12,0,29	0/0:13,0:12:29.94:0,30,244	0/0:29,0:29:64.61:0,65,496	1/1:15,0:15:14.86:75,15,0	0/0:12,0:11:12.63:0,13,145	0/0:22,0:22:53.93:0,54,408	0/0:11,0:10:18.96:0,19,176
chr10	88934596	.	GTC	G	453.59	PASS	AB=0.980;AC=21;AF=0.389;AN=54;BaseQRankSum=1.128;DP=560;FS=4.183;HRun=0;HaplotypeScore=133.3230;InbreedingCoeff=-0.0952;MQ=31.29;MQ0=32;MQRankSum=-0.863;QD=1.33;ReadPosRankSum=-1.168;VQSLOD=2.2955;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:12:0.02:0,0,0	1/1:3,0:3:5.96:44,6,0	0/0:4,0:1:2.99:0,3,24	./.	0/0:29,0:25:5.64:0,6,32	0/0:16,0:13:2.97:0,3,25	0/0:36,0:27:20.29:0,20,128	0/0:34,0:27:2.62:0,3,295	0/1:20,1:20:7.02:41,0,7	0/1:19,0:16:25.50:116,0,26	0/0:9,0:9:0:0,0,0	0/0:15,0:15:2.20:0,2,8	0/1:34,0:26:58.16:58,0,151	1/1:26,0:20:2.75:24,3,0	0/0:12,0:7:11.98:0,12,99	0/1:18,0:12:4.11:4,0,77	0/1:18,0:18:47:56,0,47	0/0:4,0:4:0.50:0,0,16	0/1:19,0:13:39.66:40,0,185	0/1:11,1:12:3.13:3,0,78	0/0:33,0:27:8.42:0,8,69	1/1:39,0:34:0.47:1,0,0	0/0:20,0:18:5.19:0,5,47	0/1:28,1:20:28.92:29,0,74	1/1:22,1:21:9.24:92,9,0	0/1:37,0:35:46.56:47,0,275	0/1:13,1:14:31.63:32,0,181	0/1:13,0:8:6.65:7,0,34
chr10	88934598	.	C	CTG	195.36	PASS	AB=0.968;AC=13;AF=0.241;AN=54;BaseQRankSum=1.342;DP=566;FS=2.036;HRun=0;HaplotypeScore=131.2904;InbreedingCoeff=0.2619;MQ=31.23;MQ0=34;MQRankSum=-2.770;QD=1.02;ReadPosRankSum=-0.302;VQSLOD=2.6670;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:14:0.47:1,0,0	1/1:3,0:3:5.96:44,6,0	0/0:5,0:1:2.99:0,3,24	./.	0/0:29,0:25:5.86:0,6,73	0/0:16,0:13:3.01:0,3,41	0/0:34,0:25:15.99:0,16,206	0/0:35,0:27:37.91:0,38,444	0/1:20,2:20:13.57:73,0,14	0/1:19,0:16:38.92:146,0,39	0/1:9,1:9:0:0,0,0	1/1:14,0:14:1.07:4,1,0	0/0:34,0:26:14.36:0,14,213	0/1:26,0:20:0:0,0,0	0/0:13,0:8:14.26:0,14,169	0/0:18,0:12:11.72:0,12,155	0/1:17,1:18:25.94:26,0,35	0/0:4,0:4:2.97:0,3,37	0/0:19,0:13:12.65:0,13,235	0/0:10,0:10:14.01:0,14,149	0/0:32,0:25:8.73:0,9,118	0/1:39,0:34:0.03:0,0,0	0/0:20,0:18:6.25:0,6,80	0/0:31,0:22:12.37:0,12,158	0/1:23,0:21:2.04:19,0,2	0/0:37,0:35:37.04:0,37,525	0/0:13,0:13:28.07:0,28,335	0/0:13,0:8:5.06:0,5,73
chr10	88934602	.	GTC	G	301.88	PASS	AB=0.954;AC=20;AF=0.370;AN=54;BaseQRankSum=3.710;DP=572;FS=0.704;HRun=0;HaplotypeScore=127.4438;InbreedingCoeff=-0.1059;MQ=30.58;MQ0=36;MQRankSum=-1.714;QD=0.88;ReadPosRankSum=-1.225;VQSLOD=2.0135;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:13:0.41:1,0,0	0/1:5,0:5:15.04:15,0,27	0/0:5,0:1:3.01:0,3,58	./.	0/0:25,5:26:6.01:0,6,112	0/0:16,1:13:2.99:0,3,58	0/0:32,2:25:20.72:0,21,359	0/0:36,0:27:32.22:0,32,601	0/1:22,0:20:12.19:12,0,52	0/1:18,0:15:33.25:33,0,167	0/0:10,0:9:0:0,0,0	1/1:12,2:14:5.61:46,6,0	0/1:31,3:26:68.09:68,0,336	0/1:20,3:17:0:0,0,0	0/0:16,0:11:10.50:0,11,228	0/1:15,3:12:24.16:24,0,209	0/1:18,0:18:43.55:44,0,84	0/0:4,0:4:2.75:0,3,55	0/1:20,0:13:16.03:16,0,326	0/0:10,0:10:15:0,15,228	0/0:31,0:25:8.50:0,8,170	1/1:30,9:34:0.47:1,0,0	0/0:17,3:18:5.22:0,5,109	0/1:28,1:20:6.88:7,0,213	1/1:23,0:21:8.77:91,9,0	0/1:34,2:33:47.95:48,0,597	0/1:13,0:13:28.24:28,0,428	0/1:12,2:8:8.12:8,0,52
chr10	88934610	.	GTC	G	118.39	PASS	AB=0.966;AC=13;AF=0.232;AN=56;BaseQRankSum=4.114;DP=588;FS=0.786;HRun=0;HaplotypeScore=128.7147;InbreedingCoeff=-0.1710;MQ=29.51;MQ0=41;MQRankSum=-2.092;QD=0.45;ReadPosRankSum=-1.145;VQSLOD=2.0045;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:12:2.42:0,2,16	0/0:4,0:4:6.02:0,6,94	0/1:15,0:4:6.49:6,0,52	0/0:30,0:1:2.97:0,3,20	0/0:33,0:28:6.01:0,6,114	0/0:16,0:12:2.99:0,3,58	0/0:35,0:25:20.72:0,21,378	0/0:33,0:23:48.22:0,48,528	0/1:22,0:20:11.04:11,0,136	0/1:20,0:17:17:17,0,365	0/0:9,0:8:0:0,0,0	0/1:15,1:16:5.16:5,0,43	0/1:35,0:26:38.59:39,0,391	0/1:23,0:18:0:0,0,0	0/0:18,1:14:13.43:0,13,276	0/1:14,4:12:26.36:26,0,213	0/1:17,0:17:34.58:35,0,99	0/0:4,0:4:3.01:0,3,57	0/0:22,0:16:12.32:0,12,459	0/0:7,0:7:12.04:0,12,226	0/0:27,0:22:8.70:0,9,173	1/1:36,2:33:0.47:1,0,0	0/0:20,0:18:5.77:0,6,116	0/0:27,2:18:15.12:0,15,250	0/0:17,0:15:2.03:0,2,7	0/1:31,2:29:51.38:51,0,617	0/1:15,0:15:13.09:13,0,535	0/1:12,1:8:41.56:42,0,48
chr10	88934616	.	GTGTC	G	152.16	PASS	AB=0.945;AC=7;AF=0.125;AN=56;BaseQRankSum=2.788;DP=620;FS=10.088;HRun=0;HaplotypeScore=136.3018;InbreedingCoeff=0.0159;MQ=28.90;MQ0=44;MQRankSum=-3.427;QD=1.01;ReadPosRankSum=-1.023;VQSLOD=1.8860;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:12:2.50:0,3,34	0/0:4,0:4:6.02:0,6,126	0/0:20,0:4:11.54:0,12,141	0/0:34,0:2:6.02:0,6,85	0/0:33,0:28:5.64:0,6,161	0/0:17,0:13:2.96:0,3,81	0/0:35,0:25:23.65:0,24,520	0/0:34,0:21:30.41:0,30,795	0/0:19,0:16:14.48:0,14,270	0/1:20,2:20:50.62:51,0,689	0/0:9,0:8:0:0,0,0	0/1:17,0:17:17.08:17,0,170	0/0:36,0:27:14.59:0,15,577	0/0:26,0:20:2.94:0,3,18	0/0:20,0:15:7.57:0,8,373	0/0:18,0:12:5.65:0,6,314	0/1:15,3:17:91.15:91,0,149	0/0:5,0:4:3.01:0,3,81	0/0:26,0:21:48.94:0,49,898	0/0:6,0:6:12.04:0,12,323	0/0:25,0:22:8.63:0,9,243	1/1:41,0:34:0.47:1,0,0	0/0:26,0:23:5.60:0,6,161	0/0:29,0:18:15.19:0,15,378	0/1:15,0:13:0.28:1,0,0	0/1:36,2:33:96.29:96,0,1066	0/0:15,0:15:13.70:0,14,799	0/0:13,0:8:1.70:0,2,79
chr10	88934626	.	GTC	G	181.08	PASS	AB=0.912;AC=7;AF=0.125;AN=56;BaseQRankSum=5.181;DP=643;FS=13.738;HRun=0;HaplotypeScore=135.6154;InbreedingCoeff=0.0010;MQ=28.85;MQ0=43;MQRankSum=-3.895;QD=1.12;ReadPosRankSum=-0.887;VQSLOD=1.8480;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,1:13:2.41:0,2,17	0/0:5,0:5:6.02:0,6,113	0/0:25,0:5:14.78:0,15,220	0/0:43,0:5:11.83:0,12,231	0/0:30,2:27:6.01:0,6,116	0/0:16,1:12:2.99:0,3,58	0/0:33,3:26:20.75:0,21,363	0/0:29,0:19:38.58:0,39,695	0/0:21,0:18:18.61:0,19,258	0/0:24,0:21:21.30:0,21,692	0/1:9,0:8:0:0,0,0	0/0:17,1:16:13.30:0,13,209	0/1:28,7:26:9.84:10,0,437	0/0:18,5:16:3.01:0,3,31	0/0:21,0:17:15.53:0,16,293	0/1:18,1:13:23.64:24,0,228	0/1:13,2:14:96.65:114,0,97	0/0:5,1:5:3.01:0,3,57	0/0:28,0:26:65.99:0,66,925	0/0:7,0:7:17.99:0,18,294	0/0:31,1:26:8.46:0,8,173	1/1:31,9:33:0.47:1,0,0	0/0:20,3:20:5.08:0,5,113	0/0:28,1:17:15.19:0,15,289	0/0:14,0:13:2.82:0,3,46	0/1:38,5:37:99:137,0,808	0/0:15,0:15:38.38:0,38,641	0/0:16,0:11:5.68:0,6,67
chr10	88934642	.	GTC	G	36.69	PASS	AB=0.954;AC=14;AF=0.250;AN=56;BaseQRankSum=5.016;DP=710;FS=1.553;HRun=0;HaplotypeScore=148.4369;InbreedingCoeff=-0.0207;MQ=29.04;MQ0=50;MQRankSum=-3.794;QD=0.14;ReadPosRankSum=-4.577;VQSLOD=1.2453;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:21:3.14:13,3,0	0/0:7,0:7:3.79:0,4,18	0/0:25,0:5:9:0,9,101	0/0:40,0:5:11.65:0,12,125	0/0:34,0:29:6.01:0,6,60	0/1:15,2:13:7.30:7,0,37	0/0:37,2:25:1.79:0,2,58	0/1:45,0:34:7.63:8,0,552	0/1:22,1:20:28.44:28,0,82	0/1:26,0:21:46.19:46,0,276	1/1:7,0:6:2.84:14,3,0	0/1:19,1:18:21.01:21,0,76	0/0:34,0:26:25.50:0,25,463	0/0:23,1:17:2.68:0,3,11	0/0:21,1:18:13.80:0,14,289	0/1:19,2:15:2.72:3,0,186	0/1:14,0:13:15.91:16,0,53	0/0:12,0:9:3.01:0,3,55	0/0:29,0:27:37.08:0,37,852	0/0:10,0:10:9.10:0,9,426	0/0:43,0:30:8.38:0,8,138	1/1:40,3:35:0.94:2,1,0	0/0:23,0:21:4.85:0,5,114	0/0:27,1:18:15.19:0,15,248	0/1:17,1:18:11.39:11,0,51	0/0:44,1:39:27.36:0,27,744	0/0:18,0:17:42.14:0,42,751	0/0:16,0:11:0.96:0,1,82
chr10	88934644	.	C	CTG	1172.36	PASS	AB=0.963;AC=26;AF=0.464;AN=56;BaseQRankSum=3.339;DP=725;FS=10.709;HRun=0;HaplotypeScore=154.6844;InbreedingCoeff=0.4907;MQ=29.29;MQ0=49;MQRankSum=-4.154;QD=3.20;ReadPosRankSum=-1.973;VQSLOD=1.5419;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,10:25:3.01:41,3,0	1/1:7,0:7:2.94:18,3,0	0/0:27,0:5:2.98:0,3,21	0/0:44,0:5:3.49:0,3,38	1/1:28,5:29:5.59:93,6,0	1/1:15,4:14:8.79:120,9,0	1/1:32,4:24:2.57:12,3,0	0/1:45,1:36:99:281,0,281	1/1:14,8:20:20.30:247,20,0	1/1:27,0:21:34.45:285,34,0	0/1:7,0:6:0:0,0,0	1/1:13,8:19:7.78:129,8,0	0/0:31,0:26:20.41:0,20,200	1/1:16,9:19:5.05:42,5,0	0/0:22,0:19:16.84:0,17,170	0/0:20,0:15:0.50:0,0,108	0/1:14,0:13:24.01:26,0,24	0/0:13,0:10:3.01:0,3,36	0/0:29,0:28:32.51:0,33,415	0/0:12,0:12:24.06:0,24,291	0/0:43,0:29:4.93:0,5,43	0/1:32,6:34:0:0,0,0	0/0:23,0:21:6.46:0,6,64	0/0:27,0:17:11.94:0,12,133	1/1:15,5:20:2.81:46,3,0	0/0:44,0:38:45.53:0,46,618	0/0:20,0:19:41.30:0,41,525	1/1:16,0:11:0.89:2,1,0
chr10	88934646	.	G	GTGTT	867.48	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=6.769;DP=730;FS=14.728;HRun=0;HaplotypeScore=170.4106;InbreedingCoeff=0.2934;MQ=29.36;MQ0=47;MQRankSum=-4.055;QD=2.22;ReadPosRankSum=-2.186;VQSLOD=1.4743;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:27:4.95:40,5,0	1/1:7,0:7:15.73:102,16,0	0/0:27,0:4:5.99:0,6,68	0/0:44,0:5:9.03:0,9,125	1/1:35,0:31:0.83:2,1,0	0/1:19,0:14:3.16:14,0,3	0/1:38,0:25:0.78:1,0,2	0/0:45,0:36:64.38:0,64,492	0/1:23,0:20:22.52:72,0,23	1/1:26,3:23:7.44:540,7,0	1/1:7,2:8:14.83:99,15,0	0/1:22,0:20:33.59:80,0,34	0/1:33,0:26:0.26:0,0,319	1/1:26,0:19:0.71:2,1,0	0/0:22,0:19:11.34:0,11,221	0/0:20,0:14:8.35:0,8,191	0/1:15,0:14:26.69:27,0,64	0/0:13,0:10:3.01:0,3,51	0/0:27,0:25:37.76:0,38,731	0/0:12,0:12:32.93:0,33,507	0/1:44,0:30:3.90:4,0,69	1/1:39,0:33:2.43:7,2,0	0/0:23,0:21:4.81:0,5,103	0/0:27,0:17:11.75:0,12,204	0/1:20,0:20:35.63:36,0,36	0/0:44,0:38:55.68:0,56,940	0/0:20,0:19:48.13:0,48,834	0/0:16,0:11:5.46:0,5,65
chr10	88934650	.	GTGTGTC	G	636.95	PASS	AB=0.975;AC=21;AF=0.375;AN=56;BaseQRankSum=3.838;DP=738;FS=31.137;HRun=0;HaplotypeScore=177.6776;InbreedingCoeff=0.0766;MQ=29.77;MQ0=48;MQRankSum=-5.096;QD=1.48;ReadPosRankSum=-3.009;VQSLOD=0.8662;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:27:4.56:16,5,0	0/1:7,1:8:54.52:55,0,117	0/0:28,0:4:2.96:0,3,19	0/1:43,0:4:2.86:3,0,11	1/1:35,0:31:0.29:19,0,0	1/1:20,0:15:3.68:20,4,0	1/1:39,0:25:1.76:11,2,0	0/1:45,0:36:59.32:165,0,59	0/1:23,0:20:3.67:75,0,4	0/1:27,2:23:76.36:289,0,76	0/0:9,1:9:14.97:0,15,146	0/0:22,0:20:2.85:0,3,64	0/1:31,0:25:28.02:28,0,270	1/1:27,0:20:1.87:9,2,0	0/1:19,1:18:10.35:10,0,149	0/0:20,0:14:5.35:0,5,172	0/1:16,0:15:12.03:30,0,12	0/0:14,0:11:3.01:0,3,50	0/0:26,0:24:59.48:0,59,823	0/0:13,0:13:32.98:0,33,704	0/0:44,1:31:5.99:0,6,102	1/1:42,0:36:6.92:49,7,0	0/0:20,0:18:5.22:0,5,72	0/0:27,0:17:12.61:0,13,149	0/1:21,0:21:13.02:13,0,61	0/0:44,0:38:43.12:0,43,669	0/0:22,0:20:50.81:0,51,1238	0/0:16,0:11:5.40:0,5,23
chr10	88934652	.	GTGTC	G	384.79	PASS	AB=0.992;AC=14;AF=0.250;AN=56;BaseQRankSum=2.981;DP=727;FS=21.776;HRun=0;HaplotypeScore=169.4398;InbreedingCoeff=0.3597;MQ=29.86;MQ0=48;MQRankSum=-3.757;QD=1.39;ReadPosRankSum=-2.912;VQSLOD=0.5793;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:27:1.71:5,2,0	0/0:8,0:8:10.20:0,10,124	0/0:26,0:4:2.96:0,3,19	0/0:41,0:5:10.31:0,10,44	0/1:34,0:30:0.85:18,0,1	1/1:19,1:15:8.37:53,8,0	1/1:36,0:23:5.48:34,5,0	0/1:42,0:36:99:174,0,261	1/1:23,0:20:8.58:69,9,0	0/1:28,1:23:99:99,0,153	0/0:10,0:9:14.71:0,15,123	0/0:21,0:19:12.10:0,12,69	0/0:31,0:25:17.37:0,17,278	0/0:28,0:21:0.27:0,0,2	0/0:20,0:18:6.31:0,6,152	0/0:20,0:13:5.04:0,5,164	0/1:16,0:15:31.49:34,0,31	0/0:14,0:11:3.01:0,3,41	0/0:27,0:24:59.73:0,60,730	0/0:13,0:13:32.99:0,33,608	0/0:45,0:32:5.81:0,6,77	1/1:41,2:37:6.92:48,7,0	0/0:20,0:18:5.09:0,5,72	0/0:26,0:17:12.52:0,13,119	0/0:21,0:21:0.77:0,1,53	0/0:43,0:37:65.47:0,65,641	0/0:22,0:20:50.80:0,51,1074	0/0:15,0:10:3.76:0,4,17
chr10	88934656	.	C	CTG	1171.09	PASS	AB=0.950;AC=33;AF=0.635;AN=52;BaseQRankSum=1.774;DP=713;FS=15.038;HRun=0;HaplotypeScore=160.7705;InbreedingCoeff=0.2789;MQ=30.37;MQ0=48;MQRankSum=-2.586;QD=2.21;ReadPosRankSum=2.465;VQSLOD=1.5313;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,14:31:3.01:39,3,0	0/0:8,0:8:0.25:0,0,132	./.	0/0:34,0:5:2.85:0,3,15	0/0:21,5:25:1.37:0,1,4	1/1:18,3:16:10.23:121,10,0	0/1:32,4:24:5.34:75,0,5	0/1:41,0:35:9.85:137,0,10	1/1:12,9:18:6.60:73,7,0	0/1:29,0:24:99:112,0,150	0/0:11,0:9:14.95:0,15,146	1/1:13,8:19:8.97:104,9,0	1/1:23,0:26:19.08:156,19,0	1/1:21,8:22:2.99:47,3,0	1/1:16,0:18:7.83:62,8,0	1/1:13,0:12:3.29:27,3,0	0/1:14,0:14:12.60:27,0,13	./.	0/0:26,0:23:35.99:0,36,373	0/0:15,0:15:29.72:0,30,301	1/1:46,0:34:3:27,3,0	1/1:39,4:37:5.99:72,6,0	1/1:20,0:19:2.81:24,3,0	1/1:24,0:17:0.36:1,0,0	1/1:14,7:21:4.97:92,5,0	0/1:36,0:35:46.99:71,0,47	0/0:22,0:20:45.14:0,45,543	1/1:7,0:8:6.01:65,6,0
chr10	88934658	.	G	GTC	579.92	PASS	AB=0.956;AC=18;AF=0.321;AN=56;BaseQRankSum=2.739;DP=706;FS=2.189;HRun=0;HaplotypeScore=166.1842;InbreedingCoeff=0.0060;MQ=30.36;MQ0=46;MQRankSum=-3.211;QD=1.65;ReadPosRankSum=4.628;VQSLOD=2.6836;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:30:14.94:15,0,18	0/1:6,2:8:38.61:39,0,105	0/0:19,0:2:3:0,3,26	0/0:29,0:5:11.95:0,12,107	0/1:28,0:24:0:0,0,1	0/1:22,0:17:28.02:38,0,28	0/1:37,0:26:17.63:37,0,18	0/0:43,0:35:33.59:0,34,367	0/1:23,0:20:26.40:26,0,34	0/1:25,4:24:99:351,0,170	0/0:11,0:9:14.82:0,15,125	0/1:20,0:18:28.85:41,0,29	0/1:29,0:24:11.88:12,0,58	1/1:29,0:22:1.99:20,2,0	0/0:20,0:18:7.59:0,8,56	0/0:18,0:12:6.92:0,7,84	0/1:13,2:14:35.13:55,0,35	0/0:16,0:13:2.96:0,3,19	0/0:24,0:21:50.90:0,51,608	0/0:15,0:15:36.09:0,36,484	0/0:47,0:34:1.49:0,1,18	1/1:42,0:36:2.91:22,3,0	0/0:21,0:19:2.97:0,3,24	0/0:28,0:18:10.48:0,10,77	1/1:22,0:22:4.94:49,5,0	0/0:40,0:34:39.87:0,40,434	0/0:24,0:22:48.15:0,48,710	1/1:13,0:8:5.18:27,5,0
chr10	88934660	.	G	GTC	208.87	PASS	AB=0.988;AC=14;AF=0.250;AN=56;BaseQRankSum=2.965;DP=694;FS=7.027;HRun=0;HaplotypeScore=166.5193;InbreedingCoeff=-0.0145;MQ=30.70;MQ0=46;MQRankSum=-2.490;QD=0.70;ReadPosRankSum=3.279;VQSLOD=2.2246;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:32:14.91:15,0,18	0/0:8,0:8:16.79:0,17,217	0/0:15,0:1:3:0,3,27	0/0:27,0:5:11.98:0,12,125	0/0:27,1:24:3.98:0,4,27	0/1:23,0:18:32.51:33,0,46	0/1:34,0:25:33.65:34,0,55	0/0:41,0:32:32.96:0,33,397	0/1:23,0:20:6.21:6,0,55	0/1:29,0:24:29.04:29,0,302	0/0:11,0:9:15.02:0,15,190	0/1:19,0:17:11.49:46,0,11	0/1:27,2:24:43.66:44,0,77	0/1:29,0:22:10.76:16,0,11	0/0:20,1:19:1.07:0,1,24	0/0:16,0:11:3.86:0,4,65	0/0:15,0:14:0.02:0,0,66	0/0:16,0:13:2.96:0,3,19	0/0:21,0:19:48.97:0,49,622	0/0:17,0:17:36.09:0,36,491	0/0:47,0:34:1.31:0,1,17	1/1:38,0:32:2.92:22,3,0	0/0:20,1:19:2.48:0,2,24	0/0:28,1:19:10.48:0,10,76	1/1:24,0:24:3.43:47,3,0	0/0:37,2:34:8.90:0,9,353	0/0:23,0:21:45.15:0,45,686	1/1:11,2:8:5.23:62,5,0
chr10	88934670	.	GTC	G	646.72	PASS	AB=0.983;AC=23;AF=0.426;AN=54;BaseQRankSum=5.478;DP=631;FS=12.589;HRun=0;HaplotypeScore=152.0926;InbreedingCoeff=0.0817;MQ=32.49;MQ0=44;MQRankSum=-5.034;QD=1.79;ReadPosRankSum=1.046;VQSLOD=2.0420;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:38:18.44:18,0,132	1/1:7,0:7:10.05:60,10,0	./.	0/1:22,0:3:2.77:3,0,9	0/0:21,1:19:4.91:0,5,31	0/0:22,2:21:29.87:0,30,279	0/0:32,1:25:12.16:0,12,125	0/1:32,4:29:99:214,0,200	1/1:18,0:15:9.58:67,10,0	0/1:24,0:19:30.36:30,0,30	1/1:10,0:8:11.15:65,11,0	0/0:21,0:18:11.05:0,11,96	0/1:20,0:17:44.08:44,0,85	0/0:24,0:17:1.87:0,2,25	0/1:20,0:17:15.11:15,0,29	0/1:11,0:8:1.02:24,0,1	1/1:15,0:14:2.18:12,2,0	1/1:18,0:15:2.98:21,3,0	0/0:17,0:14:29.08:0,29,430	0/0:22,0:21:41.12:0,41,587	0/0:45,0:32:1.83:0,2,28	0/0:23,2:21:10.70:0,11,100	1/1:14,0:13:3.46:26,3,0	0/1:30,1:23:5.85:39,0,6	0/1:30,0:30:4.80:5,0,170	0/1:31,2:29:71.35:153,0,71	0/0:23,0:21:30.69:0,31,679	0/1:13,0:9:11.97:12,0,36
chr10	88934678	.	GTGTGTGTA	G	338.73	PASS	AB=0.969;AC=13;AF=0.241;AN=54;BaseQRankSum=6.107;DP=648;FS=15.051;HRun=0;HaplotypeScore=180.9551;InbreedingCoeff=-0.0390;MQ=33.27;MQ0=40;MQRankSum=-3.484;QD=1.75;ReadPosRankSum=-2.479;VQSLOD=1.4850;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:44:19.32:0,19,361	0/1:7,1:8:3.83:4,0,39	./.	0/0:24,0:4:1.22:0,1,91	0/0:17,0:15:4.82:0,5,142	0/0:25,0:22:39.39:0,39,820	0/0:41,0:32:21.62:0,22,432	0/0:40,0:33:69.48:0,69,724	0/0:19,0:17:9.93:0,10,129	0/1:19,2:17:12.37:226,0,12	0/1:11,1:10:38.91:43,0,39	0/0:21,0:18:11.61:0,12,150	0/1:20,0:17:35:35,0,130	0/0:25,0:19:2.11:0,2,49	0/1:20,0:18:21.94:22,0,100	0/1:10,0:9:0.78:1,0,16	1/1:18,0:17:7.10:71,7,0	0/0:17,0:15:3.47:0,3,10	0/0:17,0:13:33.93:0,34,693	0/0:23,0:22:45.63:0,46,1203	0/0:52,0:40:4.29:0,4,47	0/0:24,0:21:16.74:0,17,348	1/1:13,0:12:0.47:2,0,0	0/1:31,0:25:6.48:6,0,24	0/0:28,0:28:26.93:0,27,536	0/1:32,0:29:10.55:11,0,430	0/0:21,0:19:47.73:0,48,1078	0/1:8,0:5:50.52:51,0,88
chr10	88934684	.	GTA	G	1300.65	PASS	AB=0.948;AC=21;AF=0.375;AN=56;BaseQRankSum=5.888;DP=642;FS=52.300;HRun=0;HaplotypeScore=135.0538;InbreedingCoeff=0.1228;MQ=35.67;MQ0=36;MQRankSum=-7.114;QD=3.73;ReadPosRankSum=2.165;VQSLOD=1.0225;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:45,0:43:17.27:17,0,173	1/1:3,4:7:18.06:251,18,0	1/1:20,0:2:4.96:23,5,0	0/1:26,1:6:11.05:11,0,35	0/0:17,1:16:10.91:0,11,135	0/0:25,0:22:16.40:0,16,568	0/0:41,1:34:19.53:0,20,350	0/1:40,1:35:99:120,0,572	0/1:17,0:15:28.17:31,0,28	1/1:7,10:13:33.06:467,33,0	1/1:7,6:11:21.05:277,21,0	0/0:20,0:17:14.38:0,14,148	0/1:17,0:16:8.70:9,0,106	0/0:22,0:16:3.01:0,3,55	0/0:20,0:17:9.36:0,9,60	0/1:10,0:9:3.07:6,0,3	0/1:7,10:16:3.66:118,0,4	0/0:7,0:16:5.91:0,6,39	0/0:17,0:14:12.69:0,13,220	0/0:24,0:23:44.77:0,45,329	0/0:46,0:38:5.15:0,5,55	0/0:17,2:17:20.05:0,20,291	1/1:11,0:10:0.47:2,0,0	0/1:29,0:24:13.22:13,0,29	0/1:30,0:30:5.63:6,0,263	0/1:31,0:27:65.18:65,0,228	0/0:22,0:21:31.11:0,31,382	0/1:9,0:6:44.55:53,0,45
chr10	88934688	.	CTGTG	C	675.88	PASS	AB=0.625;AC=10;AF=0.179;AN=56;BaseQRankSum=-1.954;DP=645;FS=4.492;HRun=0;HaplotypeScore=141.9954;InbreedingCoeff=0.3862;MQ=38.00;MQ0=37;MQRankSum=1.006;QD=4.20;ReadPosRankSum=0.744;VQSLOD=2.3562;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,33:44:20.76:322,21,0	0/0:9,0:9:21.05:0,21,244	0/0:26,0:4:11.51:0,12,108	0/0:33,0:8:19.61:0,20,284	0/0:13,0:15:8.69:0,9,154	0/0:13,0:22:39.12:0,39,698	0/0:34,0:34:35.68:0,36,494	0/0:29,0:32:53.83:0,54,731	0/1:6,6:11:0.52:87,0,1	0/0:16,0:13:30.03:0,30,316	0/0:14,0:12:24.02:0,24,273	0/0:12,0:17:6.02:0,6,102	0/0:18,0:16:11.54:0,12,129	0/0:16,0:16:6.02:0,6,84	0/0:17,0:16:11.82:0,12,78	0/0:7,0:11:0.62:0,1,24	0/0:16,0:15:13.21:0,13,115	0/0:18,0:16:3.01:0,3,37	0/1:7,0:13:2.11:2,0,85	0/1:4,1:24:10.57:11,0,147	0/0:26,0:42:8.42:0,8,113	0/0:11,0:18:23.11:0,23,393	1/1:11,0:10:0.89:2,1,0	0/0:31,0:27:17.12:0,17,181	1/1:8,18:29:23.71:374,24,0	0/0:18,0:23:22.10:0,22,280	0/1:11,0:21:16.08:16,0,74	0/0:9,0:6:1.86:0,2,47
chr10	88934841	.	TTTTC	T	1192.29	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.213;DP=640;FS=21.467;HRun=0;HaplotypeScore=223.4707;InbreedingCoeff=0.9660;MQ=69.56;MQ0=0;MQRankSum=-8.355;QD=23.85;ReadPosRankSum=0.204;VQSLOD=2.0729;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:56:99:0,153,3717	1/1:7,0:7:14.81:160,15,0	0/0:28,0:24:60.39:0,60,1251	0/0:32,0:25:62.94:0,63,1382	0/0:22,0:22:60.21:0,60,1520	0/0:24,0:23:57.18:0,57,1444	0/0:25,0:24:69.22:0,69,1721	0/0:27,0:27:65.85:0,66,1652	0/0:20,0:19:42.14:0,42,998	1/1:9,3:12:24.07:303,24,0	1/1:9,5:14:41.70:448,42,0	0/0:18,0:17:33.11:0,33,867	0/0:29,0:29:69.21:0,69,1782	0/0:23,0:20:51.17:0,51,1331	0/0:28,0:27:75.25:0,75,1890	0/0:17,0:17:42.04:0,42,1103	1/1:12,5:17:38.32:439,38,0	0/0:19,0:19:54.19:0,54,1370	0/0:29,0:28:78.19:0,78,1906	0/0:18,0:18:51.17:0,51,1337	0/0:21,0:21:54.02:0,54,1368	0/0:20,0:20:54.19:0,54,1313	0/0:17,0:17:38.91:0,39,971	0/0:32,0:32:87.30:0,87,2222	0/0:26,0:26:75.26:0,75,1939	0/0:33,0:33:90.31:0,90,2301	0/0:20,0:20:54.19:0,54,1329	0/0:4,0:4:6.02:0,6,158
chr10	88934843	.	TTC	T	940.40	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.578;DP=634;FS=21.384;HRun=0;HaplotypeScore=199.7120;InbreedingCoeff=0.9641;MQ=69.09;MQ0=0;MQRankSum=-8.575;QD=19.19;ReadPosRankSum=-0.230;VQSLOD=1.8880;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:55:99:0,153,2529	1/1:3,4:7:13.27:123,13,0	0/0:31,0:26:69.27:0,69,919	0/0:31,0:23:55.83:0,56,914	0/0:22,0:22:60.20:0,60,1043	0/0:24,0:23:57.18:0,57,993	0/0:25,0:24:69.21:0,69,1178	0/0:25,0:25:68.81:0,69,1155	0/0:18,0:17:42.01:0,42,652	1/1:6,5:11:24.03:240,24,0	1/1:8,6:14:39.44:348,39,0	0/0:19,0:18:36.10:0,36,616	0/0:28,0:28:69.21:0,69,1199	0/0:24,0:21:57.16:0,57,953	0/0:27,0:26:75.19:0,75,1276	0/0:17,0:17:42.03:0,42,752	1/1:8,9:17:39.03:387,39,0	0/0:19,0:19:54.15:0,54,916	0/0:29,0:28:78.18:0,78,1310	0/0:18,0:18:51.17:0,51,915	0/0:20,0:20:53.97:0,54,910	0/0:21,0:21:57.01:0,57,888	0/0:17,0:17:38.69:0,39,665	0/0:32,0:32:90.28:0,90,1542	0/0:27,0:27:78.25:0,78,1356	0/0:31,0:31:90.25:0,90,1564	0/0:20,0:20:54.14:0,54,907	0/0:3,0:3:6.02:0,6,108
chr10	88934849	.	TGGTTC	T	994.99	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.954;DP=623;FS=19.443;HRun=0;HaplotypeScore=229.2947;InbreedingCoeff=0.9664;MQ=66.10;MQ0=2;MQRankSum=-9.095;QD=22.11;ReadPosRankSum=-0.516;VQSLOD=1.7592;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:49:99:0,138,3001	1/1:5,0:6:14.94:122,15,0	0/0:31,0:22:60.61:0,61,1326	0/0:35,0:23:57.18:0,57,1336	0/0:22,0:22:60.21:0,60,1277	0/0:26,0:25:60.19:0,60,1289	0/0:23,0:22:63.22:0,63,1388	0/0:26,0:26:69.23:0,69,1464	0/0:16,0:15:36.12:0,36,781	1/1:8,5:13:32.94:333,33,0	1/1:11,1:12:35.50:315,35,0	0/0:20,0:19:42.13:0,42,833	0/0:27,0:27:72.25:0,72,1563	0/0:26,0:23:63.22:0,63,1322	0/0:25,0:24:69.20:0,69,1384	0/0:17,0:17:45.14:0,45,955	1/1:14,0:14:27.15:383,27,0	0/0:19,0:19:54.12:0,54,1086	0/0:30,0:28:83.75:0,84,1728	0/0:18,0:17:51.16:0,51,1113	0/0:19,0:19:51.14:0,51,1029	0/0:20,0:20:48.16:0,48,1035	0/0:18,0:18:38.98:0,39,784	0/0:31,0:31:87.19:0,87,1644	0/0:27,0:27:78.25:0,78,1695	0/0:30,0:30:87.29:0,87,1938	0/0:18,0:18:48.16:0,48,1095	0/0:3,0:3:6.02:0,6,131
chr10	88934851	.	G	GGGTT	1486.11	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=9.355;DP=616;FS=8.474;HRun=0;HaplotypeScore=217.8092;InbreedingCoeff=0.8795;MQ=65.28;MQ0=2;MQRankSum=-9.652;QD=29.72;ReadPosRankSum=-1.599;VQSLOD=2.3172;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:49:99:0,138,2846	0/1:7,0:7:1.55:92,0,2	0/0:32,0:23:59.72:0,60,983	0/0:35,0:23:30:0,30,951	0/0:22,0:22:60.21:0,60,1222	0/0:25,0:24:57.20:0,57,1173	0/0:22,0:21:60.21:0,60,1236	0/0:26,0:26:66.23:0,66,1311	0/0:15,0:14:36.12:0,36,752	1/1:10,3:13:33.07:504,33,0	1/1:9,5:13:26.13:411,26,0	0/0:19,0:18:39.13:0,39,800	0/0:29,0:29:72.25:0,72,1481	0/0:27,0:24:66.18:0,66,1282	0/0:22,0:21:60.20:0,60,1202	0/0:16,0:16:42.14:0,42,870	1/1:11,3:16:45.03:627,45,0	0/0:18,0:18:45.15:0,45,942	0/0:31,0:29:81.79:0,82,1619	0/0:17,0:16:48.15:0,48,951	0/0:18,0:18:48.15:0,48,941	0/0:21,0:21:54.16:0,54,1053	0/0:16,0:16:39.09:0,39,747	0/0:26,0:26:72.21:0,72,1420	0/0:26,0:26:75.26:0,75,1566	0/0:30,0:30:84.29:0,84,1757	0/0:18,0:18:47.99:0,48,963	0/0:3,0:3:6.02:0,6,126
chr10	88934854	.	CT	C	7571.42	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=1.530;DP=616;FS=17.393;HRun=10;HaplotypeScore=160.0811;InbreedingCoeff=0.8368;MQ=65.25;MQ0=3;MQRankSum=3.068;QD=16.64;ReadPosRankSum=7.113;VQSLOD=3.5562;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,44:47:99:1068,123,0	0/0:7,0:7:11.73:0,12,71	0/0:32,0:22:41.75:0,42,412	0/0:35,2:24:21.37:0,21,381	1/1:3,19:22:41.97:365,42,0	1/1:4,22:24:41.98:365,42,0	1/1:3,19:21:44.98:391,45,0	1/1:10,14:24:38.96:337,39,0	1/1:1,13:13:32.99:286,33,0	0/1:14,0:14:7.77:8,0,77	0/1:14,0:13:2.90:3,0,69	1/1:5,14:18:35.99:313,36,0	1/1:5,23:28:53.97:469,54,0	1/1:3,23:23:56.98:495,57,0	1/1:8,15:22:38.97:337,39,0	1/1:4,13:17:29.97:260,30,0	0/0:17,0:17:9.39:0,9,174	1/1:2,16:18:35.98:312,36,0	0/0:9,0:28:65.70:0,66,345	0/0:6,0:17:31.54:0,32,167	1/1:2,15:17:38.98:339,39,0	1/1:4,18:22:32.98:286,33,0	1/1:5,11:16:26.99:235,27,0	1/1:2,22:24:26.84:462,27,0	1/1:1,24:25:65.98:573,66,0	1/1:4,26:30:71.92:618,72,0	0/0:4,0:19:37.03:0,37,194	1/1:0,5:5:6:52,6,0
chr10	88935223	.	AGTGTGTGTGTGTGTGTGT	A	5578.31	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=8.174;DP=566;FS=7.581;HRun=0;HaplotypeScore=260.7384;InbreedingCoeff=0.8828;MQ=68.39;MQ0=12;MQRankSum=-7.542;QD=41.63;ReadPosRankSum=2.655;VQSLOD=3.0334;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:25:9.50:0,10,578	0/0:7,0:7:15.05:0,15,1179	./.	0/0:21,0:16:6.90:0,7,155	1/1:11,7:19:17.27:717,17,0	1/1:13,8:22:21.07:1002,21,0	1/1:22,6:29:6.02:272,6,0	0/0:16,0:16:6.02:0,6,312	0/0:12,0:14:19.76:0,20,1295	0/0:20,0:17:39.13:0,39,2486	0/0:7,0:7:6.02:0,6,406	1/1:13,8:23:27.09:1273,27,0	0/0:15,0:15:33.11:0,33,2410	1/1:12,8:19:21.07:1022,21,0	0/0:21,0:20:36.12:0,36,2786	0/0:14,0:15:21.07:0,21,1513	0/0:28,0:28:63.22:0,63,4462	0/0:26,0:31:56.01:0,56,3542	0/0:15,0:15:28.34:0,28,2019	0/0:14,0:21:26.12:0,26,1624	0/0:13,0:14:15.05:0,15,642	1/1:9,10:21:30.06:1293,30,0	0/0:18,0:21:45.15:0,45,2974	0/0:26,0:26:48.16:0,48,3899	0/0:11,0:19:14.71:0,15,647	0/0:38,0:39:69.24:0,69,5050	0/0:9,0:22:27.09:0,27,1860	0/0:7,0:7:9.03:0,9,605
chr10	88935966	.	CA	C	381.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.548;DP=709;FS=9.673;HRun=5;HaplotypeScore=66.3227;InbreedingCoeff=0.9979;MQ=83.64;MQ0=0;MQRankSum=-2.715;QD=23.84;ReadPosRankSum=0.211;VQSLOD=2.1817;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,1599	0/0:15,0:15:45.15:0,45,615	0/0:21,0:21:60.19:0,60,789	0/0:21,0:21:47.98:0,48,605	0/0:19,0:19:51.17:0,51,697	0/0:27,0:27:78.26:0,78,1067	0/0:30,0:30:87.29:0,87,1190	0/0:26,0:26:75.23:0,75,998	0/0:24,0:24:72.24:0,72,984	0/0:29,0:29:78.25:0,78,1054	0/0:17,0:17:51.17:0,51,698	0/0:32,0:32:90.29:0,90,1210	0/0:29,0:29:87.26:0,87,1155	0/0:22,0:22:60.20:0,60,820	0/0:25,0:25:72.23:0,72,969	0/0:30,0:30:84.28:0,84,1141	0/0:29,0:29:84.27:0,84,1133	0/0:20,0:20:54.17:0,54,724	0/0:36,0:36:99:0,102,1366	0/0:26,0:26:69.20:0,69,909	0/0:44,0:44:99:0,126,1723	0/0:20,0:20:54.18:0,54,731	1/1:0,16:16:42.12:476,42,0	0/0:25,0:25:69.23:0,69,943	0/0:31,0:31:90.29:0,90,1217	0/0:30,0:30:90.29:0,90,1217	0/0:15,0:15:42.14:0,42,575	0/0:8,0:8:24.08:0,24,327
chr10	88939192	.	CCA	C	929.81	PASS	AB=0.870;AC=42;AF=0.875;AN=48;BaseQRankSum=2.561;DP=459;FS=5.183;HRun=0;HaplotypeScore=80.3219;InbreedingCoeff=0.2157;MQ=68.76;MQ0=6;MQRankSum=0.493;QD=2.63;ReadPosRankSum=-0.907;VQSLOD=1.4421;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:29:2.70:11,3,0	1/1:4,6:10:3.01:33,3,0	./.	0/0:23,0:18:0:0,0,0	1/1:10,0:16:2.84:14,3,0	1/1:12,0:23:8.52:42,9,0	1/1:17,0:18:2.36:13,2,0	./.	1/1:7,0:13:17.04:84,17,0	./.	1/1:15,4:19:2.97:32,3,0	1/1:6,0:12:8.52:42,9,0	1/1:7,1:8:5.88:47,6,0	1/1:6,0:7:2.84:14,3,0	1/1:14,1:17:11.86:110,12,0	1/1:7,1:8:8.59:58,9,0	1/1:17,1:18:12.03:127,12,0	0/1:11,5:17:22.79:96,0,23	1/1:13,0:13:2.84:14,3,0	1/1:9,0:16:8.52:42,9,0	0/1:15,0:14:0:0,0,0	1/1:14,0:19:2.84:14,3,0	./.	1/1:23,8:33:14.37:124,14,0	1/1:14,0:15:8.52:42,9,0	0/0:15,0:15:9.01:0,9,95	1/1:8,0:14:8.52:42,9,0	1/1:6,3:9:3.01:32,3,0
chr10	88940423	.	A	AC	327.63	PASS	AB=0.854;AC=6;AF=0.107;AN=56;BaseQRankSum=7.413;DP=736;FS=4.582;HRun=0;HaplotypeScore=204.2589;InbreedingCoeff=-0.1178;MQ=50.24;MQ0=7;MQRankSum=-6.345;QD=2.93;ReadPosRankSum=-4.133;VQSLOD=2.6370;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:19:9.11:9,0,337	0/1:8,3:11:32.25:32,0,99	0/0:43,0:32:81.27:0,81,1119	0/0:41,0:30:71.90:0,72,929	0/0:25,0:25:26.56:0,27,408	0/0:19,0:19:39.98:0,40,514	0/0:24,0:24:48.15:0,48,642	0/0:36,0:36:99:0,108,1431	0/0:22,0:22:36.16:0,36,577	0/1:20,6:22:99:106,0,441	0/1:8,7:14:59.42:129,0,59	0/0:35,0:34:79.69:0,80,1072	0/0:28,0:28:77.45:0,77,1002	0/0:34,0:34:67.88:0,68,964	0/0:42,0:42:99:0,102,1348	0/0:25,0:25:69.21:0,69,927	0/1:18,4:20:62.54:63,0,287	0/0:17,0:17:36.03:0,36,529	0/0:23,0:23:65.92:0,66,829	0/0:30,0:30:84.28:0,84,1172	0/0:32,0:32:33.15:0,33,511	0/0:24,0:24:52.55:0,53,637	0/0:23,0:23:45.64:0,46,634	0/0:26,0:25:26.20:0,26,404	0/1:18,0:18:99:112,0,266	0/0:32,1:32:92.98:0,93,1258	0/0:25,0:25:75.23:0,75,1012	0/0:11,0:11:24.07:0,24,318
chr10	88940430	.	A	AACACAC	14362.61	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=1.629;DP=733;FS=0.000;HRun=0;HaplotypeScore=183.3001;InbreedingCoeff=0.8606;MQ=48.84;MQ0=7;MQRankSum=-11.388;QD=24.51;ReadPosRankSum=-2.237;VQSLOD=3.7191;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:24:3.01:53,3,0	1/1:0,0:9:3.01:37,3,0	0/0:37,0:26:36.12:0,36,717	0/0:33,0:25:33.07:0,33,519	1/1:11,0:23:17.87:160,18,0	1/1:7,1:22:19.79:417,20,0	1/1:11,1:26:14.96:273,15,0	1/1:15,21:38:66.20:1743,66,0	1/1:16,0:29:3.01:79,3,0	1/1:2,0:21:44.20:448,44,0	1/1:1,0:14:12.03:157,12,0	1/1:16,1:36:38.79:645,39,0	1/1:10,13:27:39.13:1100,39,0	1/1:12,0:36:38.52:684,39,0	1/1:11,27:41:60.21:1708,60,0	1/1:8,16:26:39.13:1188,39,0	1/1:2,0:17:17.41:287,17,0	1/1:6,10:18:33.11:914,33,0	0/0:21,0:21:58.99:0,59,1156	0/0:31,0:32:75.26:0,75,1584	1/1:19,9:32:19.65:360,20,0	1/1:8,2:25:32.83:558,33,0	1/1:8,11:21:27.22:568,27,0	1/1:11,15:25:12.04:349,12,0	1/1:6,0:22:18.06:425,18,0	1/1:8,20:30:64.45:1752,64,0	0/0:24,0:24:63.22:0,63,1323	1/1:4,9:13:15.05:458,15,0
chr10	88940880	.	AT	A	7184.99	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=10.153;DP=593;FS=12.160;HRun=11;HaplotypeScore=102.7708;InbreedingCoeff=0.9517;MQ=73.79;MQ0=0;MQRankSum=0.242;QD=14.54;ReadPosRankSum=3.746;VQSLOD=4.0495;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:33:50.93:147,51,0	1/1:2,0:10:14.26:41,14,0	0/0:15,0:15:15.03:0,15,151	0/0:5,0:5:3.96:0,4,86	1/1:0,30:30:80.77:652,81,0	1/1:2,22:24:56.93:468,57,0	1/1:1,7:8:17.98:148,18,0	1/1:6,21:27:56.85:459,57,0	1/1:1,0:27:42.78:124,43,0	1/1:2,1:28:50.72:162,51,0	1/1:3,0:26:42.77:124,43,0	1/1:0,16:16:41.95:345,42,0	1/1:4,20:24:53.93:443,54,0	1/1:4,13:17:40.19:323,40,0	1/1:1,22:23:62.93:517,63,0	1/1:2,17:20:52.95:420,53,0	1/1:1,0:11:20.36:59,20,0	1/1:5,18:23:21.93:387,22,0	0/0:21,0:21:51.12:0,51,538	0/0:30,0:30:72.18:0,72,767	1/1:2,14:16:38.95:320,39,0	1/1:1,20:21:59.83:480,60,0	1/1:0,14:14:38.92:314,39,0	1/1:1,8:10:26.01:203,26,0	1/1:5,0:44:67.21:194,67,0	1/1:3,26:31:81.76:633,82,0	0/0:27,0:28:75.02:0,75,778	1/1:2,9:11:26.97:222,27,0
chr10	88942943	.	AC	A	2860.06	PASS	AB=0.923;AC=20;AF=0.357;AN=56;BaseQRankSum=6.938;DP=564;FS=5.690;HRun=10;HaplotypeScore=75.7436;InbreedingCoeff=0.5343;MQ=68.64;MQ0=0;MQRankSum=-0.261;QD=9.17;ReadPosRankSum=1.586;VQSLOD=2.5690;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:22:42.78:126,43,0	0/0:4,0:7:11.19:0,11,57	0/1:26,1:25:52.36:52,0,183	0/0:13,0:12:7.11:0,7,63	0/1:25,2:27:9.68:10,0,440	0/0:24,0:24:54.12:0,54,580	0/1:22,2:24:14.85:15,0,510	1/1:11,16:27:38.95:338,39,0	1/1:0,0:17:34.63:102,35,0	0/0:9,0:19:29.52:0,30,247	0/0:5,0:11:8.67:0,9,51	0/0:11,0:11:21.78:0,22,312	0/0:17,0:17:36.06:0,36,372	0/1:20,2:22:20.87:21,0,474	0/0:16,1:17:10.04:0,10,332	0/0:13,0:13:36.08:0,36,389	0/0:9,0:29:54.35:0,54,328	0/1:14,2:17:12.03:12,0,299	1/1:4,14:18:41.89:351,42,0	1/1:5,29:34:89.20:749,89,0	0/0:15,1:16:7.90:0,8,297	0/0:14,1:15:13.02:0,13,327	0/1:18,1:19:0.69:1,0,419	0/0:19,0:19:48.07:0,48,507	1/1:3,27:30:80.97:703,81,0	0/0:23,0:23:25.83:0,26,493	1/1:3,24:28:67.82:578,68,0	0/0:17,0:17:48.13:0,48,531
chr10	88943414	.	C	CCT	36807.98	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-15.183;DP=829;FS=10.298;HRun=0;HaplotypeScore=80.2485;InbreedingCoeff=0.9999;MQ=83.28;MQ0=0;MQRankSum=-6.700;QD=54.05;ReadPosRankSum=4.668;VQSLOD=5.0802;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:39:99:2072,102,0	1/1:0,15:15:39.13:792,39,0	0/0:21,0:21:63.21:0,63,980	0/0:25,0:25:63.20:0,63,990	1/1:2,24:26:69.24:1400,69,0	1/1:1,21:23:54.19:1097,54,0	1/1:0,35:36:99:2011,100,0	1/1:0,21:21:63.22:1269,63,0	1/1:0,25:25:66.23:1340,66,0	1/1:3,29:35:99:1819,99,0	1/1:2,20:22:57.20:1156,57,0	1/1:0,41:43:99:2356,117,0	1/1:0,33:33:96.33:1950,96,0	1/1:0,31:32:78.27:1585,78,0	1/1:0,35:35:90.31:1828,90,0	1/1:0,37:37:99:2010,99,0	1/1:0,43:44:99:2316,114,0	1/1:0,23:24:60.21:1219,60,0	0/0:33,0:33:99:0,99,1524	0/0:39,0:39:99:0,111,1804	1/1:1,44:46:99:2438,120,0	1/1:0,23:23:69.24:1401,69,0	1/1:0,22:23:57.20:1156,57,0	1/1:0,30:31:81.28:1646,81,0	1/1:1,23:24:66.23:1341,66,0	1/1:0,32:33:99:1939,99,0	0/0:30,0:29:90.31:0,90,1465	1/1:0,11:11:33.11:667,33,0
chr10	88943657	.	CGACAGCCTGTGGCAGTTAAA	C	5629.37	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.518;DP=658;FS=6.661;HRun=0;HaplotypeScore=338.3080;InbreedingCoeff=0.9978;MQ=83.48;MQ0=0;MQRankSum=-9.387;QD=97.06;ReadPosRankSum=4.174;VQSLOD=3.2434;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,13:19:30.10:1621,30,0	0/0:13,0:13:36.12:0,36,3133	0/0:20,0:20:54.19:0,54,2609	0/0:23,0:23:57.13:0,57,2667	0/0:28,0:28:78.27:0,78,5345	0/0:11,0:11:30.07:0,30,1712	0/0:34,0:34:99:0,102,8554	0/0:15,0:15:42.14:0,42,2720	1/1:7,16:23:42.14:2331,42,0	0/0:28,0:28:81.28:0,81,5739	0/0:12,0:12:33.11:0,33,2249	0/0:28,0:28:75.26:0,75,6725	0/0:31,0:31:90.31:0,90,8087	0/0:28,0:28:84.27:0,84,7071	0/0:23,0:23:63.22:0,63,5181	0/0:22,0:22:63.22:0,63,5822	0/0:52,0:52:99:0,154,13537	0/0:30,0:30:90.31:0,90,7799	0/0:18,0:18:48.16:0,48,2871	0/0:8,0:8:24.07:0,24,1506	0/0:37,0:36:99:0,99,8022	0/0:26,0:26:66.23:0,66,4555	0/0:19,0:19:57.20:0,57,4408	0/0:34,0:34:96.29:0,96,7509	1/1:4,12:16:30.10:1677,30,0	0/0:26,0:26:72.24:0,72,5852	0/0:26,0:26:78.23:0,78,6489	0/0:8,0:8:24.08:0,24,1486
chr10	88943923	.	GGCCTA	G	26425.02	PASS	AB=0.528;AC=37;AF=0.661;AN=56;BaseQRankSum=15.029;DP=745;FS=6.683;HRun=0;HaplotypeScore=155.5396;InbreedingCoeff=0.9190;MQ=82.26;MQ0=0;MQRankSum=-9.572;QD=51.41;ReadPosRankSum=6.205;VQSLOD=4.7705;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,3946	1/1:0,12:12:29.36:637,29,0	0/0:22,0:22:66.23:0,66,1874	0/0:26,0:26:69.17:0,69,1864	1/1:2,26:28:60.21:1265,60,0	1/1:1,34:35:96.33:2045,96,0	1/1:3,13:16:33.11:702,33,0	0/0:20,0:20:60.20:0,60,1756	0/0:30,0:30:87.30:0,87,2585	1/1:1,36:37:99:2279,111,0	1/1:0,15:15:36.12:742,36,0	1/1:2,31:33:87.30:1844,87,0	1/1:1,21:22:48.16:1011,48,0	1/1:4,30:34:81.28:1716,81,0	1/1:3,32:35:81.28:1727,81,0	0/1:3,25:28:99:1395,0,104	1/1:2,32:34:84.25:1737,84,0	1/1:2,29:31:69.24:1461,69,0	0/0:28,0:28:81.26:0,81,2359	0/0:22,0:22:63.20:0,63,1877	1/1:1,39:40:87.30:1795,87,0	1/1:2,26:29:69.17:1434,69,0	1/1:0,17:17:48.16:986,48,0	1/1:2,21:23:42.14:895,42,0	0/0:18,0:18:54.19:0,54,1671	1/1:3,36:39:99:2371,114,0	0/0:19,0:18:57.20:0,57,1738	1/1:0,6:6:18.06:384,18,0
chr10	88944555	.	T	TA	1006.48	PASS	AB=0.913;AC=7;AF=0.125;AN=56;BaseQRankSum=-7.766;DP=585;FS=2.112;HRun=9;HaplotypeScore=66.9117;InbreedingCoeff=0.7891;MQ=72.59;MQ0=0;MQRankSum=-1.207;QD=14.18;ReadPosRankSum=1.141;VQSLOD=3.8217;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:42.11:465,42,0	0/0:8,0:8:17.99:0,18,156	0/0:17,0:17:41.96:0,42,358	0/0:7,0:7:17.99:0,18,153	0/0:39,0:40:99:0,107,893	0/0:25,0:25:68.97:0,69,595	0/0:18,0:18:44.98:0,45,390	0/0:36,0:36:81.40:0,81,698	1/1:3,10:13:1.02:239,1,0	0/1:19,2:21:3.59:4,0,363	0/0:13,0:13:38.99:0,39,339	0/0:27,0:27:44.61:0,45,549	0/0:29,0:29:83.95:0,84,723	0/0:28,0:28:68.97:0,69,599	0/0:24,0:24:62.98:0,63,547	0/0:25,0:25:65.96:0,66,569	0/0:21,0:21:53.97:0,54,469	0/0:22,0:22:62.99:0,63,547	0/0:20,0:20:56.94:0,57,484	0/0:23,0:23:62.97:0,63,543	0/0:16,0:16:38.99:0,39,339	0/0:11,0:11:20.66:0,21,167	0/0:27,0:27:62.97:0,63,545	0/0:13,0:13:35.95:0,36,305	1/1:2,16:18:39.11:431,39,0	0/0:22,0:22:65.98:0,66,570	0/0:23,0:23:56.93:0,57,484	0/0:19,0:19:50.99:0,51,442
chr10	88944954	.	ACT	A	1181.80	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.963;DP=679;FS=3.462;HRun=0;HaplotypeScore=76.4894;InbreedingCoeff=0.9915;MQ=79.60;MQ0=0;MQRankSum=-0.761;QD=38.12;ReadPosRankSum=-4.167;VQSLOD=4.0612;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,172,3173	0/0:7,0:7:21.07:0,21,393	0/0:19,0:19:48.16:0,48,858	0/0:13,0:13:30.10:0,30,545	0/0:24,0:24:72.25:0,72,1334	0/0:18,0:18:54.17:0,54,980	0/0:25,0:25:75.26:0,75,1405	1/1:2,29:31:87.29:1277,87,0	0/0:24,0:24:72.25:0,72,1349	0/0:19,0:19:57.20:0,57,1063	0/0:20,0:20:60.21:0,60,1111	0/0:31,0:31:93.32:0,93,1734	0/0:15,0:15:45.15:0,45,843	0/0:24,0:24:72.25:0,72,1327	0/0:35,0:35:99:0,105,1952	0/0:27,0:27:81.28:0,81,1504	0/0:34,0:34:99:0,99,1838	0/0:22,0:22:63.22:0,63,1150	0/0:22,0:22:66.23:0,66,1237	0/0:31,0:31:90.31:0,90,1681	0/0:33,0:33:96.33:0,96,1782	0/0:15,0:15:45.15:0,45,834	0/0:26,0:26:78.27:0,78,1460	0/0:31,0:31:93.32:0,93,1742	0/0:16,0:16:48.16:0,48,894	0/0:29,0:29:87.30:0,87,1630	0/0:23,0:22:66.23:0,66,1228	0/0:7,0:7:21.07:0,21,393
chr10	88946289	.	C	CA	2951.92	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-11.634;DP=712;FS=1.407;HRun=6;HaplotypeScore=67.9563;InbreedingCoeff=0.9977;MQ=77.05;MQ0=0;MQRankSum=-0.583;QD=30.12;ReadPosRankSum=0.767;VQSLOD=4.3054;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,39:42:99:1359,108,0	0/0:14,0:13:27.01:0,27,260	0/0:12,0:12:27:0,27,263	0/0:23,0:23:20.83:0,21,354	0/0:38,0:38:99:0,105,1064	0/0:19,0:19:54.12:0,54,551	0/0:15,0:15:42.09:0,42,428	0/0:22,0:22:54.11:0,54,546	1/1:4,23:27:63.20:793,63,0	0/0:28,0:28:81.18:0,81,827	0/0:32,0:32:84.19:0,84,857	0/0:28,0:28:81.18:0,81,826	0/0:22,0:22:66.15:0,66,673	0/0:26,0:26:75.17:0,75,764	0/0:25,0:25:63.14:0,63,643	0/0:33,0:33:90.20:0,90,918	0/0:23,0:23:63.11:0,63,634	0/0:17,0:17:42.09:0,42,428	0/0:19,0:19:51.11:0,51,519	0/0:24,0:24:57.11:0,57,573	0/0:21,0:21:63.14:0,63,642	0/0:27,0:27:81.17:0,81,821	0/0:23,0:22:54.12:0,54,551	0/0:26,0:26:72.16:0,72,735	1/1:1,28:29:75.24:944,75,0	0/0:21,0:21:54.12:0,54,550	0/0:40,0:40:99:0,102,1024	0/0:36,0:36:93.05:0,93,949
chr10	88946783	.	CA	C	2993.77	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.213;DP=790;FS=8.664;HRun=3;HaplotypeScore=75.2468;InbreedingCoeff=0.9976;MQ=78.51;MQ0=0;MQRankSum=-1.849;QD=31.85;ReadPosRankSum=0.949;VQSLOD=3.5596;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,163,2292	1/1:0,17:17:48.15:595,48,0	0/0:13,0:13:29.31:0,29,313	0/0:22,0:22:40.88:0,41,489	0/0:25,0:25:72.22:0,72,1017	0/0:22,0:22:66.22:0,66,950	0/0:33,0:33:99:0,99,1425	0/0:30,0:30:78.26:0,78,1122	0/0:33,0:33:93.30:0,93,1321	1/1:1,24:25:72.22:886,72,0	1/1:1,18:19:45.14:558,45,0	0/0:34,0:34:99:0,102,1469	0/0:36,0:36:99:0,105,1457	0/0:24,0:24:72.21:0,72,1000	0/0:34,0:34:99:0,99,1409	0/0:35,0:35:99:0,102,1434	1/1:0,33:33:90.28:1116,90,0	0/0:21,0:21:63.17:0,63,878	0/0:27,0:27:78.25:0,78,1106	0/0:30,0:30:90.29:0,90,1269	0/0:29,0:29:84.27:0,84,1190	0/0:24,0:24:72.23:0,72,1018	0/0:28,0:28:81.25:0,81,1129	0/0:53,0:53:99:0,154,2201	0/0:28,0:28:78.24:0,78,1103	0/0:23,0:23:69.23:0,69,994	0/0:31,0:31:93.30:0,93,1322	0/0:6,0:6:18.06:0,18,259
chr10	88947718	.	G	GGAAGCTCTCT	4949.77	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-4.068;DP=735;FS=2.108;HRun=0;HaplotypeScore=211.3617;InbreedingCoeff=0.8434;MQ=81.91;MQ0=0;MQRankSum=-8.009;QD=48.53;ReadPosRankSum=-1.486;VQSLOD=4.3896;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:93.31:0,93,2739	0/0:9,0:9:15.05:0,15,457	0/0:29,0:29:35.82:0,36,663	0/1:18,0:18:18.23:18,0,398	0/0:32,0:32:44.18:0,44,1631	0/0:17,0:17:42.14:0,42,1257	0/0:35,0:35:63.15:0,63,1629	0/0:29,0:29:45.15:0,45,1111	0/0:22,0:22:45.12:0,45,1281	0/0:27,0:27:60.16:0,60,1520	0/0:11,0:11:24.08:0,24,686	0/0:40,0:40:87.29:0,87,2545	0/0:23,0:23:51.16:0,51,1441	0/0:34,0:34:84.27:0,84,2404	0/0:37,0:37:99:0,99,2693	0/0:27,0:27:66.17:0,66,1833	0/0:25,0:25:51.18:0,51,1543	0/0:30,0:30:69.20:0,69,1967	1/1:17,6:24:48.15:1979,48,0	1/1:14,11:25:36.12:1812,36,0	0/0:38,0:38:84.23:0,84,2291	0/0:27,0:27:51.16:0,51,1442	0/0:12,0:12:27.09:0,27,823	0/0:41,0:41:81.28:0,81,2370	1/1:17,0:16:15.05:688,15,0	0/0:37,0:37:87.30:0,87,2549	1/1:10,5:17:9.03:453,9,0	0/0:10,0:10:21.07:0,21,596
chr10	88947731	.	A	AGCTCTCTGAC	4761.37	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=0.288;DP=713;FS=1.265;HRun=0;HaplotypeScore=207.6321;InbreedingCoeff=0.3176;MQ=82.34;MQ0=0;MQRankSum=-9.932;QD=58.07;ReadPosRankSum=-0.159;VQSLOD=4.5570;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,120,3107	0/0:6,0:6:15.05:0,15,476	0/0:28,0:28:66.05:0,66,1122	0/0:19,0:19:6.12:0,6,598	0/0:26,0:26:76.05:0,76,1907	0/0:15,0:15:45.14:0,45,1355	0/0:37,0:37:90.09:0,90,1960	0/0:30,0:30:60.17:0,60,1435	0/0:20,0:20:57.09:0,57,1450	0/0:24,0:24:63.21:0,63,1717	0/0:10,0:10:27.09:0,27,768	0/0:39,0:39:99:0,102,2813	0/0:24,0:24:57.17:0,57,1605	0/0:32,0:32:93.29:0,93,2651	0/0:40,0:40:99:0,117,3090	0/0:30,0:30:81.13:0,81,2086	0/0:21,0:21:57.16:0,57,1660	0/0:27,0:27:75.23:0,75,2162	0/1:23,0:22:57.92:1470,0,58	0/1:22,0:22:73.88:1285,0,74	0/0:36,0:36:96.25:0,96,2521	0/0:23,0:23:63.15:0,63,1629	0/0:14,0:14:36.09:0,36,936	0/0:35,0:35:96.26:0,96,2652	1/1:8,11:18:24.08:1216,24,0	0/0:35,0:35:93.30:0,93,2774	0/1:18,0:18:94.94:789,0,95	0/0:14,0:14:32.98:0,33,706
chr10	88947890	.	AC	A	9117.87	PASS	AB=0.927;AC=40;AF=0.714;AN=56;BaseQRankSum=7.573;DP=1052;FS=10.206;HRun=2;HaplotypeScore=179.9925;InbreedingCoeff=0.7319;MQ=62.18;MQ0=45;MQRankSum=4.416;QD=11.93;ReadPosRankSum=3.532;VQSLOD=2.8097;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,16:50:24.88:242,25,0	0/0:15,0:15:23.75:0,24,317	0/0:67,0:34:87.13:0,87,1173	0/0:91,0:51:99:0,108,1343	1/1:27,1:20:12.56:62,13,0	1/1:18,0:16:3.54:8,4,0	1/1:34,2:31:11.93:133,12,0	1/1:26,26:61:99:1830,177,0	1/1:15,8:39:30.46:451,30,0	0/0:43,0:43:60.34:0,60,987	0/0:18,0:18:35.65:0,36,537	1/1:27,0:25:11.71:32,12,0	1/1:1,34:35:96.05:1219,96,0	1/1:37,2:32:11.01:67,11,0	1/1:0,46:46:99:1636,126,0	1/1:43,0:44:17.64:52,18,0	0/0:23,0:23:32.83:0,33,469	1/1:33,0:33:15.45:68,15,0	0/0:29,0:30:41.94:0,42,1112	0/1:20,2:31:72.57:73,0,657	1/1:59,0:59:15.81:38,16,0	1/1:37,1:32:18.14:52,18,0	1/1:0,24:25:61.44:782,61,0	1/1:1,33:34:87.28:1129,87,0	1/1:22,4:23:7.96:63,8,0	1/1:37,0:37:6.14:926,6,0	0/1:18,3:31:99:235,0,521	1/1:13,0:14:4.43:18,4,0
chr10	88947891	.	C	CAGAG	3799.09	PASS	AB=0.732;AC=29;AF=0.518;AN=56;BaseQRankSum=8.258;DP=1087;FS=15.067;HRun=0;HaplotypeScore=238.8597;InbreedingCoeff=0.5228;MQ=61.99;MQ0=48;MQRankSum=-1.822;QD=5.52;ReadPosRankSum=0.130;VQSLOD=1.2928;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:51:26.37:206,26,0	0/0:8,0:15:30.05:0,30,525	0/0:68,0:34:65.40:0,65,891	0/0:91,0:52:52.79:0,53,962	0/1:1,0:21:0.33:55,0,0	1/1:1,0:18:12.03:128,12,0	0/1:2,0:31:6.06:23,0,6	1/1:41,0:67:77.35:546,77,0	1/1:29,0:39:52.84:376,53,0	0/0:19,0:43:99:0,114,1621	0/0:11,0:18:35.96:0,36,685	1/1:1,0:28:30.08:320,30,0	0/1:35,0:35:54.57:55,0,291	1/1:3,0:33:8.70:151,9,0	0/0:46,0:46:96.47:0,96,509	1/1:3,1:46:11.98:411,12,0	0/0:16,0:23:33.03:0,33,581	1/1:0,2:34:22.96:414,23,0	0/0:34,0:31:49.96:0,50,865	0/1:35,0:32:15.42:15,0,822	1/1:0,2:65:30.10:520,30,0	1/1:1,0:30:26.90:270,27,0	0/0:26,0:26:50.08:0,50,241	0/0:33,0:34:63.95:0,64,326	1/1:4,0:23:5.36:18,5,0	0/1:5,0:44:99:228,0,214	0/1:31,0:31:16.13:16,0,735	0/1:1,0:13:11.21:46,0,11
chr10	88947894	.	G	GAC	512.94	PASS	AB=0.937;AC=6;AF=0.107;AN=56;BaseQRankSum=3.324;DP=1081;FS=3.493;HRun=0;HaplotypeScore=229.0720;InbreedingCoeff=0.2056;MQ=60.79;MQ0=49;MQRankSum=-4.482;QD=2.21;ReadPosRankSum=-3.217;VQSLOD=2.3340;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:52,7:53:32.58:33,0,200	0/0:15,0:15:30.02:0,30,380	0/0:65,0:32:76.63:0,77,1084	0/0:93,0:52:54.36:0,54,1132	0/0:32,0:24:17.92:0,18,151	0/0:19,0:17:17.87:0,18,148	0/0:40,0:35:17.92:0,18,163	0/1:71,0:71:99:371,0,533	0/1:36,3:39:98.17:98,0,362	0/0:40,0:40:99:0,103,1173	0/0:15,0:15:27.08:0,27,392	0/0:29,0:27:32.62:0,33,240	0/0:35,0:35:93.15:0,93,1128	0/0:37,1:31:20.84:0,21,183	0/0:48,0:48:99:0,129,1658	0/0:44,0:44:39:0,39,376	0/0:21,0:21:29.57:0,30,457	0/1:31,0:31:11.66:12,0,171	0/0:38,0:34:93.82:0,94,1258	0/0:36,0:33:53.38:0,53,784	0/0:59,0:59:29.95:0,30,247	0/0:35,0:29:29.10:0,29,194	0/0:27,0:27:67.44:0,67,855	0/0:34,0:34:87.18:0,87,1128	1/1:21,5:24:9.03:123,9,0	0/0:42,0:42:69.99:0,70,1413	0/0:31,0:31:69.19:0,69,911	0/0:13,0:13:6:0,6,57
chr10	88947900	.	G	GAC	414.45	PASS	AB=0.813;AC=3;AF=0.054;AN=56;BaseQRankSum=4.170;DP=1062;FS=6.389;HRun=0;HaplotypeScore=226.5688;InbreedingCoeff=-0.0602;MQ=61.18;MQ0=45;MQRankSum=-4.186;QD=3.14;ReadPosRankSum=-3.397;VQSLOD=1.1295;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,8:53:23.61:0,24,333	0/0:14,0:14:30:0,30,367	0/0:58,0:27:55.91:0,56,889	0/0:89,0:51:58.50:0,59,1100	0/0:33,0:26:30.07:0,30,411	0/0:18,0:16:18.06:0,18,275	0/0:39,0:34:27.09:0,27,416	0/1:57,10:67:99:367,0,1686	0/1:33,6:37:99:133,0,535	0/0:39,0:39:99:0,117,1324	0/0:14,0:14:24.08:0,24,362	0/0:29,0:27:36.12:0,36,548	0/0:30,0:30:87.27:0,87,1302	0/0:35,0:29:24.08:0,24,363	0/0:44,0:44:99:0,120,1804	0/0:45,0:45:48.16:0,48,699	0/0:24,0:24:38.54:0,39,524	0/0:29,0:29:28.65:0,29,383	0/0:46,0:37:99:0,108,1399	0/0:36,0:33:65.40:0,65,953	0/0:62,0:62:45.12:0,45,594	0/0:35,0:30:35.76:0,36,552	0/0:27,0:27:69.18:0,69,988	0/0:38,0:38:96.33:0,96,1460	0/1:15,11:23:12.52:13,0,53	0/0:40,0:40:67.81:0,68,1580	0/0:32,0:32:66.22:0,66,1000	0/0:11,0:11:6.02:0,6,87
chr10	88949444	.	CT	C	12268.29	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.179;DP=532;FS=0.000;HRun=8;HaplotypeScore=56.1008;InbreedingCoeff=0.9887;MQ=67.18;MQ0=0;MQRankSum=-2.576;QD=24.20;ReadPosRankSum=3.688;VQSLOD=5.3416;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:29:75.12:724,75,0	1/1:0,10:10:30.05:290,30,0	0/0:16,0:13:23.25:0,23,214	0/0:9,0:8:15.03:0,15,160	1/1:0,29:29:75.11:723,75,0	1/1:1,16:17:45.07:435,45,0	1/1:1,11:12:30.05:290,30,0	1/1:11,11:22:38.08:352,38,0	1/1:2,16:18:42.06:406,42,0	1/1:1,11:12:33.04:313,33,0	1/1:2,13:15:35.77:347,36,0	1/1:0,16:16:48.08:463,48,0	1/1:2,24:26:72.11:695,72,0	1/1:2,22:24:63.10:608,63,0	1/1:2,26:28:69.11:666,69,0	1/1:1,18:19:48.07:464,48,0	1/1:4,31:35:84.13:811,84,0	1/1:3,28:31:69.11:666,69,0	1/1:2,13:15:39.05:372,39,0	1/1:0,17:17:42.06:406,42,0	1/1:2,10:12:30.04:290,30,0	1/1:1,14:15:36.05:348,36,0	1/1:2,12:14:33.05:319,33,0	1/1:3,18:21:45.07:435,45,0	1/1:0,10:10:30.05:290,30,0	1/1:2,20:22:60.06:571,60,0	1/1:0,25:25:69.11:666,69,0	1/1:0,13:13:33.05:319,33,0
chr10	88949702	.	TAC	T	805.19	PASS	AB=0.875;AC=25;AF=0.543;AN=46;BaseQRankSum=4.608;DP=366;FS=0.790;HRun=0;HaplotypeScore=58.0137;InbreedingCoeff=0.6914;MQ=65.73;MQ0=11;MQRankSum=-0.853;QD=5.16;ReadPosRankSum=3.259;VQSLOD=2.0943;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:19.82:0,20,215	1/1:4,4:8:9.02:98,9,0	./.	./.	1/1:8,0:12:11.36:56,11,0	1/1:7,0:13:11.36:56,11,0	1/1:13,3:16:12.01:121,12,0	0/0:20,0:20:18.06:0,18,226	0/0:11,0:13:21.01:0,21,226	1/1:9,2:11:3.01:33,3,0	1/1:8,0:8:2.99:24,3,0	1/1:7,0:10:8.95:42,9,0	0/0:9,0:9:6.02:0,6,88	./.	./.	0/1:6,1:7:20.70:21,0,122	1/1:7,4:11:12.03:131,12,0	0/0:15,0:16:16.29:0,16,200	./.	1/1:14,2:16:3.01:33,3,0	0/0:13,0:13:6.02:0,6,90	1/1:7,0:10:8.99:43,9,0	0/0:10,0:10:6.01:0,6,70	0/0:8,0:8:9.03:0,9,126	1/1:6,0:16:29.06:129,29,0	0/0:14,0:14:12.02:0,12,133	1/1:11,6:16:18.05:196,18,0	0/0:4,0:4:9.03:0,9,134
chr10	88949768	.	CA	C	6218.20	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=6.461;DP=450;FS=4.471;HRun=9;HaplotypeScore=65.5439;InbreedingCoeff=0.7854;MQ=76.28;MQ0=0;MQRankSum=0.613;QD=16.19;ReadPosRankSum=2.278;VQSLOD=5.1612;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:13.31:352,13,0	0/0:11,0:11:24.04:0,24,263	0/1:26,0:16:10.34:10,0,102	0/1:11,0:9:1.64:2,0,79	1/1:1,0:30:55:162,55,0	1/1:4,0:20:29.46:85,29,0	1/1:3,0:11:14.26:42,14,0	1/1:2,31:33:92.95:821,93,0	1/1:0,8:8:24.01:220,24,0	0/0:17,0:17:51.11:0,51,574	0/0:20,0:20:54.15:0,54,615	1/1:0,0:15:26.48:78,26,0	1/1:2,9:11:21.01:192,21,0	1/1:0,0:10:18.33:54,18,0	1/1:0,15:15:36.02:330,36,0	1/1:2,5:7:12:110,12,0	0/0:17,0:18:50.98:0,51,568	1/1:3,21:25:58.10:506,58,0	1/1:1,6:7:18.01:165,18,0	1/1:0,23:23:69.04:631,69,0	1/1:0,7:7:21.01:192,21,0	1/1:1,0:6:10.37:31,10,0	1/1:3,12:15:36.02:329,36,0	1/1:1,9:10:24.01:219,24,0	1/1:7,21:28:54.02:494,54,0	1/1:3,14:17:10.41:350,10,0	1/1:1,17:18:51.01:460,51,0	1/1:0,14:14:42.02:384,42,0
chr10	88951268	.	C	CG	10340.79	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-15.134;DP=700;FS=10.820;HRun=5;HaplotypeScore=93.6972;InbreedingCoeff=0.9258;MQ=78.76;MQ0=0;MQRankSum=-2.029;QD=26.11;ReadPosRankSum=2.802;VQSLOD=3.8741;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:79.98:0,80,402	0/0:12,0:12:33.07:0,33,348	0/0:21,0:20:42.97:0,43,392	0/0:21,0:21:39.11:0,39,412	1/1:2,20:22:48.05:590,48,0	1/1:1,20:21:54.18:710,54,0	1/1:2,36:38:75.24:986,75,0	0/0:19,0:19:42.09:0,42,439	0/0:27,0:27:49.94:0,50,280	0/0:25,0:25:69.14:0,69,722	0/0:16,0:16:33.91:0,34,332	1/1:4,17:21:48.14:617,48,0	1/1:5,25:30:54.65:708,55,0	1/1:3,15:18:30.10:394,30,0	1/1:2,25:27:57.19:749,57,0	1/1:5,28:33:51.29:884,51,0	0/0:31,0:31:87.17:0,87,907	1/1:2,23:25:57.19:748,57,0	0/0:15,0:15:36.51:0,37,196	0/0:29,0:29:16.69:0,17,241	1/1:4,13:17:30.10:394,30,0	1/1:4,24:28:69.07:854,69,0	1/1:1,16:17:38.98:475,39,0	1/1:3,25:28:52.79:737,53,0	0/1:23,0:23:68.29:78,0,68	1/1:2,31:33:60.44:1063,60,0	0/0:48,0:47:82.36:0,82,431	1/1:0,15:15:27.09:352,27,0
chr10	88951273	.	G	GAA	6129.63	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-13.784;DP=689;FS=6.110;HRun=8;HaplotypeScore=122.2663;InbreedingCoeff=0.9456;MQ=79.10;MQ0=0;MQRankSum=-1.941;QD=31.76;ReadPosRankSum=0.825;VQSLOD=4.0627;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,37:40:95.81:1488,96,0	0/0:12,0:12:33.07:0,33,359	0/0:20,0:19:41.91:0,42,412	0/0:22,0:22:43.17:0,43,538	0/0:19,0:19:40.86:0,41,192	0/0:20,0:20:44.42:0,44,194	0/0:37,0:37:74.99:0,75,364	0/0:16,0:16:39.10:0,39,433	1/1:4,26:31:65.59:1037,66,0	0/0:26,0:26:69.17:0,69,760	0/0:14,0:14:30.07:0,30,333	0/0:18,0:19:9.91:0,10,146	0/0:27,0:27:53.37:0,53,292	0/0:16,0:16:30.75:0,31,155	0/0:27,0:27:60.49:0,60,317	0/0:28,0:28:69.81:0,70,338	0/0:30,0:30:84.20:0,84,933	0/0:24,0:24:53.56:0,54,252	1/1:3,12:16:39.12:597,39,0	1/1:5,25:35:75.18:1096,75,0	0/0:16,0:16:36.26:0,36,217	0/0:27,0:27:60.83:0,61,272	0/0:17,0:17:32.39:0,32,136	0/0:29,0:29:60.06:0,60,311	1/1:5,0:21:2:80,2,0	0/0:35,0:35:83.93:0,84,506	1/1:4,42:49:99:1833,123,0	0/0:15,0:15:16.71:0,17,81
chr10	88951726	.	CTACAAGCACCTGTATTCA	C	35776.10	PASS	AB=0.633;AC=40;AF=0.714;AN=56;BaseQRankSum=14.734;DP=569;FS=3.343;HRun=0;HaplotypeScore=305.7397;InbreedingCoeff=0.7649;MQ=65.63;MQ0=0;MQRankSum=-15.614;QD=85.79;ReadPosRankSum=0.706;VQSLOD=4.3316;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,28:34:57.20:2489,57,0	0/0:7,0:7:21.07:0,21,1815	0/0:19,0:19:51.17:0,51,2069	0/0:14,0:14:30.10:0,30,1637	1/1:3,21:24:42.61:1806,43,0	1/1:7,13:20:36.12:1701,36,0	1/1:6,18:24:42.14:1810,42,0	1/1:11,11:22:33.10:1153,33,0	1/1:2,13:15:33.11:1634,33,0	0/0:25,0:25:72.23:0,72,5591	0/0:21,0:21:60.21:0,60,4655	1/1:6,14:20:36.12:1701,36,0	1/1:5,15:20:39.13:1899,39,0	1/1:6,20:26:57.20:2742,57,0	1/1:2,31:33:81.28:3818,81,0	1/1:1,24:25:54.59:2531,55,0	0/0:44,0:44:99:0,132,10120	0/1:6,4:9:99:276,0,254	1/1:9,9:18:24.08:903,24,0	1/1:0,21:21:54.18:2322,54,0	1/1:2,5:7:6.02:238,6,0	1/1:1,10:11:27.09:1158,27,0	1/1:2,14:16:30.10:1264,30,0	1/1:6,12:18:5.80:309,6,0	0/0:22,0:22:66.23:0,66,4949	0/1:5,22:27:99:3022,0,457	1/1:4,20:24:57.20:2844,57,0	1/1:1,1:2:3.01:155,3,0
chr10	88952853	.	T	TGC	4285.86	PASS	AB=1.000;AC=36;AF=0.667;AN=54;BaseQRankSum=7.919;DP=713;FS=2.421;HRun=0;HaplotypeScore=186.7567;InbreedingCoeff=0.2856;MQ=63.61;MQ0=11;MQRankSum=1.321;QD=7.34;ReadPosRankSum=-0.253;VQSLOD=4.3405;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:41:36.51:262,37,0	0/0:9,0:9:26.96:0,27,248	./.	0/0:22,0:8:5.82:0,6,35	0/1:23,0:23:27:177,0,27	1/1:17,0:17:31.34:160,31,0	1/1:40,0:40:68.80:434,69,0	1/1:10,14:24:20.67:167,21,0	1/1:16,0:15:23.11:139,23,0	0/0:29,0:27:60.43:0,60,615	0/0:16,0:16:41.64:0,42,449	1/1:36,0:36:68.61:352,69,0	0/1:36,0:36:81.19:239,0,81	1/1:26,0:26:54.60:269,55,0	0/1:30,0:30:71.75:153,0,72	0/1:29,0:29:86.38:171,0,86	0/0:35,0:35:69.24:0,69,944	1/1:25,0:25:50.03:244,50,0	1/1:15,0:15:15.20:109,15,0	1/1:12,0:12:7.71:41,8,0	0/1:54,0:53:99:170,0,145	1/1:17,0:17:27.30:135,27,0	0/1:20,0:20:63.21:63,0,72	0/1:47,0:47:96.41:255,0,96	0/1:22,0:22:29.69:30,0,147	1/1:7,17:25:10.68:490,11,0	1/1:18,0:17:11.85:101,12,0	1/1:10,0:10:10.37:124,10,0
chr10	88952858	.	GCA	G	3896.42	PASS	AB=0.917;AC=33;AF=0.589;AN=56;BaseQRankSum=4.699;DP=701;FS=1.278;HRun=0;HaplotypeScore=180.1542;InbreedingCoeff=0.0220;MQ=58.14;MQ0=12;MQRankSum=-0.283;QD=6.74;ReadPosRankSum=-1.801;VQSLOD=3.0616;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,1:42:10.98:75,11,0	0/0:9,0:9:9.03:0,9,134	0/0:20,0:4:2.96:0,3,19	0/0:21,0:4:2.04:0,2,6	0/1:20,4:24:99:138,0,204	1/1:7,10:18:14.53:381,15,0	1/1:18,16:38:13.42:388,13,0	0/0:21,0:20:3.83:0,4,20	1/1:8,0:13:8.52:42,9,0	0/1:25,1:24:22.43:22,0,419	0/1:15,2:17:13.52:14,0,336	1/1:11,22:35:57:624,57,0	0/1:33,2:35:15.50:16,0,413	1/1:9,15:26:50.89:529,51,0	0/0:26,1:28:3.95:0,4,360	0/1:25,2:29:88.49:88,0,356	0/1:30,5:36:4.40:4,0,866	1/1:9,14:23:45.13:508,45,0	1/1:14,0:17:8.62:46,9,0	1/1:5,0:11:5.28:28,5,0	0/1:45,7:51:99:275,0,491	1/1:7,10:17:30:312,30,0	0/1:17,1:18:28.63:29,0,282	0/1:41,6:48:99:203,0,471	0/0:5,1:23:2.45:0,2,289	0/1:26,1:27:62.75:63,0,281	1/1:6,0:14:11.40:57,11,0	0/1:10,0:10:50.25:55,0,50
chr10	88953030	.	G	GA	15469.99	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=6.796;DP=683;FS=2.150;HRun=8;HaplotypeScore=92.3386;InbreedingCoeff=0.9873;MQ=74.92;MQ0=1;MQRankSum=-2.948;QD=28.75;ReadPosRankSum=3.106;VQSLOD=4.5557;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:60.18:692,60,0	0/0:10,0:10:27.01:0,27,247	0/0:20,0:20:39.70:0,40,335	0/0:16,0:15:8.32:0,8,198	1/1:4,23:27:69.12:762,69,0	1/1:3,19:23:57:638,57,0	1/1:2,17:19:36.11:415,36,0	1/1:9,30:39:87.22:981,87,0	1/1:1,17:18:42.12:485,42,0	0/0:42,0:42:99:0,111,1006	0/0:12,0:12:30.01:0,30,274	1/1:4,27:31:78.23:900,78,0	1/1:4,28:32:78.23:900,78,0	1/1:1,26:27:72.21:831,72,0	1/1:5,18:23:54.16:623,54,0	1/1:1,23:24:69.20:796,69,0	0/0:16,0:17:44.06:0,44,390	1/1:4,26:30:56.75:895,57,0	1/1:4,16:20:51.14:580,51,0	1/1:1,26:27:75.18:851,75,0	1/1:4,24:28:69.20:796,69,0	1/1:2,14:16:39.12:449,39,0	1/1:1,24:25:72.21:831,72,0	1/1:6,28:34:75.22:866,75,0	0/0:28,0:28:78.02:0,78,708	1/1:2,34:36:99:1177,102,0	1/1:1,18:19:48.14:554,48,0	1/1:0,15:15:39.12:450,39,0
chr10	88953685	.	AGG	A	6996.70	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=14.983;DP=601;FS=99.740;HRun=2;HaplotypeScore=173.2446;InbreedingCoeff=0.9977;MQ=68.78;MQ0=0;MQRankSum=-4.304;QD=16.35;ReadPosRankSum=0.734;VQSLOD=1.1826;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,2:36:70.16:481,70,0	0/0:14,0:14:42.14:0,42,853	0/0:19,0:19:54.18:0,54,1013	0/0:22,0:22:58.44:0,58,1140	1/1:22,0:22:53.59:408,54,0	1/1:14,1:15:37.14:293,37,0	1/1:19,1:20:36.62:299,37,0	1/1:15,0:15:41:348,41,0	1/1:21,0:21:42.54:397,43,0	0/0:26,0:26:78.27:0,78,1582	0/0:21,0:21:63.22:0,63,1264	1/1:27,1:28:45.41:319,45,0	1/1:19,0:19:33.59:288,34,0	1/1:22,0:22:39.35:318,39,0	1/1:21,0:21:44.42:370,44,0	1/1:18,1:19:40.17:389,40,0	0/0:37,0:37:99:0,111,2206	1/1:19,0:19:39.51:235,40,0	1/1:7,1:8:20.58:141,21,0	1/1:20,0:20:39.12:321,39,0	1/1:26,2:28:65.04:437,65,0	1/1:20,0:20:44.24:351,44,0	1/1:20,0:20:40.61:325,41,0	1/1:23,1:24:41.81:392,42,0	0/0:34,0:34:99:0,102,2027	1/1:17,0:17:40.30:310,40,0	1/1:26,0:26:64.07:473,64,0	1/1:8,0:8:18.54:103,19,0
chr10	88953949	.	TAGTA	T	18819.85	PASS	AB=0.601;AC=39;AF=0.696;AN=56;BaseQRankSum=13.256;DP=645;FS=1.173;HRun=0;HaplotypeScore=115.3524;InbreedingCoeff=0.7445;MQ=50.87;MQ0=27;MQRankSum=-8.783;QD=40.74;ReadPosRankSum=3.742;VQSLOD=5.3081;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:33:81.28:1485,81,0	0/0:11,0:11:30.10:0,30,780	0/0:35,0:21:56.53:0,57,1364	0/0:35,0:23:52.73:0,53,1403	0/1:4,17:20:22.39:651,0,22	1/1:0,18:18:51.17:918,51,0	1/1:1,14:15:36.12:662,36,0	1/1:10,11:14:30.06:485,30,0	1/1:3,15:18:39.13:717,39,0	0/0:30,0:28:81.28:0,81,2135	0/0:19,0:19:42.14:0,42,1074	1/1:3,27:30:72.25:1321,72,0	1/1:3,21:23:57.06:1047,57,0	1/1:1,22:23:63.22:1157,63,0	1/1:2,22:24:60.21:1099,60,0	1/1:0,22:22:54.19:992,54,0	0/0:28,0:28:81.28:0,81,2104	1/1:2,17:19:42.14:754,42,0	0/1:8,7:9:53.46:332,0,53	1/1:4,19:22:42.14:755,42,0	1/1:3,21:24:54.18:979,54,0	1/1:1,17:17:42.14:733,42,0	1/1:1,23:24:66.22:1172,66,0	1/1:0,22:22:57.20:1046,57,0	0/0:25,0:24:69.24:0,69,1822	0/1:7,22:28:95.51:914,0,96	1/1:2,27:29:72.25:1324,72,0	1/1:2,6:8:15.05:275,15,0
chr10	88954052	.	G	GGGTT	20751.51	PASS	AB=0.564;AC=41;AF=0.732;AN=56;BaseQRankSum=15.776;DP=517;FS=1.189;HRun=0;HaplotypeScore=230.0391;InbreedingCoeff=0.9262;MQ=82.89;MQ0=0;MQRankSum=-16.728;QD=58.95;ReadPosRankSum=0.554;VQSLOD=5.4059;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:18:48.16:1270,48,0	0/0:16,0:16:45.15:0,45,832	0/0:23,0:23:57.17:0,57,987	0/0:22,0:22:50.04:0,50,784	1/1:4,16:21:48.16:1260,48,0	1/1:4,17:21:48.12:1217,48,0	1/1:8,13:21:54.11:1248,54,0	1/1:15,12:27:60.16:1459,60,0	1/1:4,13:18:48.16:1224,48,0	0/0:34,0:34:99:0,102,1872	0/0:18,0:18:48.16:0,48,888	1/1:5,14:19:48.16:1196,48,0	1/1:8,13:21:51.10:1232,51,0	1/1:4,7:11:24.08:596,24,0	1/1:6,12:18:39.13:987,39,0	1/1:3,16:19:54.19:1436,54,0	0/0:33,0:33:90.31:0,90,1661	1/1:5,4:9:18.06:477,18,0	1/1:7,10:17:42.14:1113,42,0	1/1:4,16:20:36.12:954,36,0	1/1:4,4:8:12:259,12,0	1/1:5,13:18:51.04:1107,51,0	1/1:2,10:13:27.09:708,27,0	1/1:3,10:13:20.71:434,21,0	0/0:19,0:19:54.19:0,54,1008	0/1:5,17:22:1.82:1302,0,2	1/1:4,11:15:39.02:1033,39,0	1/1:0,3:3:9.03:240,9,0
chr10	88954067	.	G	GC	9137.94	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=16.224;DP=484;FS=3.367;HRun=5;HaplotypeScore=254.6758;InbreedingCoeff=0.9715;MQ=84.90;MQ0=0;MQRankSum=-15.942;QD=27.86;ReadPosRankSum=0.708;VQSLOD=1.4006;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:42.13:540,42,0	0/0:12,0:12:36.09:0,36,386	0/0:27,0:27:69.10:0,69,702	0/0:20,0:20:41.25:0,41,454	1/1:4,18:22:38.74:450,39,0	1/1:2,18:20:48.05:587,48,0	1/1:5,12:17:42.13:538,42,0	1/1:6,11:17:33.11:433,33,0	1/1:1,14:16:39.12:501,39,0	0/0:37,0:37:99:0,105,1098	0/0:16,0:16:42.11:0,42,451	1/1:2,16:18:45.15:591,45,0	1/1:2,17:19:51.17:667,51,0	1/1:0,11:11:30.03:367,30,0	1/1:2,14:16:39.02:471,39,0	1/1:2,17:19:48.15:624,48,0	0/0:26,0:26:78.20:0,78,838	1/1:2,7:9:21.95:278,22,0	1/1:9,8:17:24.03:295,24,0	1/1:6,12:18:30.10:387,30,0	1/1:3,4:7:9.50:113,9,0	1/1:2,19:21:47.70:585,48,0	1/1:1,11:13:30.09:376,30,0	1/1:5,6:11:15.39:156,15,0	0/0:18,0:18:51.12:0,51,542	1/1:4,16:20:12.89:511,13,0	1/1:1,15:16:42.14:552,42,0	1/1:1,2:3:9.03:117,9,0
chr10	88954080	.	T	TTCATGTG	29748.36	PASS	AB=0.613;AC=41;AF=0.732;AN=56;BaseQRankSum=15.532;DP=525;FS=5.067;HRun=0;HaplotypeScore=246.6674;InbreedingCoeff=0.8979;MQ=80.58;MQ0=0;MQRankSum=-16.914;QD=81.95;ReadPosRankSum=0.744;VQSLOD=4.8068;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,10:22:39.13:1457,39,0	0/0:11,0:11:33.11:0,33,870	0/0:30,0:30:90.28:0,90,2140	0/0:24,0:24:60.09:0,60,1383	1/1:13,13:26:39.08:1486,39,0	1/1:7,14:21:45.15:1782,45,0	1/1:12,8:20:42.14:1611,42,0	1/1:11,8:19:45.11:1466,45,0	1/1:6,10:16:39.13:1494,39,0	0/0:34,0:34:99:0,102,2569	0/0:17,0:17:42.12:0,42,958	1/1:6,14:22:48.16:1867,48,0	1/1:5,16:21:57.19:2137,57,0	1/1:6,9:15:33.11:1208,33,0	1/1:5,11:16:36.12:1396,36,0	1/1:7,11:18:45.15:1784,45,0	0/0:30,0:30:90.24:0,90,2280	1/1:3,9:12:30.10:1173,30,0	1/1:8,4:13:33.11:1241,33,0	1/1:13,9:22:24.08:960,24,0	1/1:1,5:6:15.05:566,15,0	1/1:8,17:26:66.18:2496,66,0	1/1:8,9:17:39.13:1456,39,0	1/1:3,6:9:15.05:598,15,0	0/0:16,0:16:42.14:0,42,1084	0/1:7,12:19:40.30:1365,0,40	1/1:7,12:19:48.12:1798,48,0	1/1:1,3:4:12.04:406,12,0
chr10	88955013	.	GT	G	8188.28	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=7.530;DP=581;FS=2.387;HRun=4;HaplotypeScore=162.6562;InbreedingCoeff=0.9093;MQ=65.01;MQ0=2;MQRankSum=-11.050;QD=17.88;ReadPosRankSum=3.891;VQSLOD=3.9484;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,15:22:62.59:481,63,0	0/0:12,0:12:23.77:0,24,218	0/1:42,0:21:5.27:5,0,179	0/0:26,0:15:22.88:0,23,241	1/1:11,17:28:68.37:504,68,0	1/1:2,25:27:80.89:673,81,0	1/1:9,9:18:35.80:284,36,0	1/1:13,13:26:68.31:527,68,0	1/1:9,9:18:53.96:458,54,0	0/0:28,0:28:81.11:0,81,833	0/0:27,0:27:75.06:0,75,759	1/1:6,5:11:26.80:200,27,0	1/1:9,7:16:44.87:359,45,0	1/1:7,15:22:47.85:381,48,0	1/1:7,13:20:44.53:352,45,0	1/1:8,13:21:51.64:401,52,0	0/0:30,0:30:70.35:0,70,714	1/1:9,6:15:30.56:250,31,0	1/1:10,7:17:47.83:394,48,0	1/1:6,12:17:50.69:386,51,0	1/1:6,2:8:17.96:148,18,0	1/1:8,12:20:56.57:425,57,0	1/1:11,13:24:50.41:387,50,0	1/1:7,7:14:20.88:162,21,0	1/1:5,9:13:29.85:231,30,0	1/1:12,8:20:21.75:373,22,0	1/1:10,10:19:47.85:385,48,0	1/1:7,10:17:50.89:420,51,0
chr10	88955016	.	TTA	T	9647	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=7.287;DP=564;FS=1.791;HRun=0;HaplotypeScore=164.5757;InbreedingCoeff=0.9827;MQ=63.12;MQ0=2;MQRankSum=-10.352;QD=24.06;ReadPosRankSum=3.934;VQSLOD=5.7043;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:49.66:476,50,0	0/0:8,0:8:24.05:0,24,302	0/0:41,0:18:18.84:0,19,297	0/0:27,0:16:27.03:0,27,311	1/1:18,10:28:68.54:585,69,0	1/1:27,0:27:81.16:819,81,0	1/1:9,8:17:36:358,36,0	1/1:13,12:25:68.82:683,69,0	1/1:18,0:18:52.29:485,52,0	0/0:28,0:28:84.02:0,84,1093	0/0:30,0:30:81.05:0,81,1022	1/1:5,5:11:26.88:235,27,0	1/1:16,0:16:45.01:416,45,0	1/1:15,6:21:48.05:468,48,0	1/1:13,4:18:44.14:427,44,0	1/1:14,7:21:51.92:504,52,0	0/0:28,0:28:72.10:0,72,992	1/1:12,2:14:29.85:320,30,0	1/1:11,2:17:47.96:484,48,0	1/1:12,6:17:50.71:435,51,0	1/1:8,0:8:17.70:158,18,0	1/1:12,7:19:56.70:488,57,0	1/1:13,9:22:50.57:456,51,0	1/1:7,6:13:20.96:197,21,0	1/1:9,5:13:29.91:266,30,0	1/1:14,4:18:8.79:450,9,0	1/1:16,1:17:48:465,48,0	1/1:17,0:17:51.01:472,51,0
chr10	88955017	.	T	TA	1201.34	PASS	AB=0.786;AC=8;AF=0.143;AN=56;BaseQRankSum=-10.933;DP=562;FS=1.763;HRun=13;HaplotypeScore=186.0805;InbreedingCoeff=0.6359;MQ=63.94;MQ0=3;MQRankSum=10.158;QD=10.82;ReadPosRankSum=-2.852;VQSLOD=0.6076;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:21.87:0,22,61	1/1:2,5:8:18.20:141,18,0	0/0:45,0:19:12.77:0,13,109	0/0:27,0:18:10.61:0,11,64	0/0:28,0:28:28.48:0,28,80	0/0:26,0:26:50.93:0,51,143	0/0:17,0:17:18.11:0,18,52	0/0:25,0:25:25.32:0,25,70	0/0:17,0:17:20.09:0,20,56	1/1:9,17:27:38.30:443,38,0	0/1:12,18:30:30.19:306,0,30	0/0:11,0:11:12.17:0,12,34	0/0:15,0:15:13.09:0,13,37	0/0:21,0:21:30.55:0,31,86	0/0:18,0:18:25.57:0,26,71	0/0:21,0:21:27.35:0,27,77	1/1:7,19:28:21.57:453,22,0	0/0:14,0:14:10.40:0,10,28	0/0:17,0:17:17.24:0,17,48	0/0:18,0:17:18.07:0,18,51	0/0:7,0:7:3.79:0,4,11	0/0:19,0:19:22.35:0,22,63	0/0:22,0:22:24.32:0,24,68	0/0:13,0:13:12.20:0,12,34	0/0:14,0:13:12.22:0,12,34	0/1:17,1:18:7.64:8,0,27	0/0:16,0:16:21.01:0,21,59	0/0:17,0:17:17.83:0,18,50
chr10	88955021	.	AAAAAAAAAAC	A	18392.64	PASS	AB=0.974;AC=42;AF=0.750;AN=56;BaseQRankSum=10.590;DP=537;FS=0.000;HRun=0;HaplotypeScore=205.5576;InbreedingCoeff=0.7752;MQ=62.01;MQ0=3;MQRankSum=-11.926;QD=48.66;ReadPosRankSum=5.572;VQSLOD=4.2095;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:19.18:491,0,19	0/0:7,0:7:21.07:0,21,853	0/0:45,0:18:35.79:0,36,1102	0/0:29,0:18:28.27:0,28,704	1/1:26,0:26:48:1278,48,0	1/1:23,3:26:75.25:2109,75,0	1/1:14,0:14:30.01:787,30,0	1/1:24,1:25:50.86:1122,51,0	1/1:16,0:16:8.47:460,8,0	0/0:26,0:26:66.19:0,66,2457	0/0:26,0:26:63.13:0,63,2575	1/1:10,0:10:17.86:513,18,0	1/1:14,0:14:23.58:569,24,0	1/1:20,0:20:45.14:1285,45,0	1/1:18,0:18:37.04:1101,37,0	1/1:21,0:21:44.99:1211,45,0	0/0:26,0:26:63.22:0,63,2809	1/1:14,0:14:20.80:478,21,0	1/1:17,0:17:30.42:716,30,0	1/1:15,2:16:29.77:815,30,0	1/1:5,0:5:5.64:133,6,0	1/1:18,1:19:32.96:941,33,0	1/1:22,0:22:35.66:1027,36,0	1/1:10,1:11:18.05:505,18,0	1/1:13,0:12:18.01:513,18,0	0/1:17,1:18:99:679,0,101	1/1:15,0:15:32.98:899,33,0	1/1:16,0:16:26.51:761,27,0
chr10	88955022	.	AAAAAAAAAC	A	15849.74	PASS	AB=0.720;AC=43;AF=0.768;AN=56;BaseQRankSum=11.234;DP=528;FS=0.446;HRun=0;HaplotypeScore=200.3563;InbreedingCoeff=0.8733;MQ=60.97;MQ0=3;MQRankSum=-12.040;QD=42.84;ReadPosRankSum=5.361;VQSLOD=4.1162;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:32.79:866,33,0	0/0:7,0:7:21.07:0,21,752	0/0:44,0:17:29.30:0,29,1029	0/0:30,0:18:25.36:0,25,647	1/1:7,18:25:48.11:1083,48,0	1/1:4,22:26:75.25:1724,75,0	1/1:5,9:14:28.33:631,28,0	1/1:12,12:24:45.22:892,45,0	1/1:15,0:15:30:786,30,0	0/0:27,0:27:67.56:0,68,2284	0/0:25,0:25:63.05:0,63,2296	1/1:5,5:10:18.04:413,18,0	1/1:7,7:14:22.59:475,23,0	1/1:5,15:20:45.15:1031,45,0	1/1:5,13:18:38.40:897,38,0	1/1:7,14:21:43.01:969,43,0	0/0:25,0:25:63.22:0,63,2526	1/1:7,6:13:20.64:382,21,0	1/1:10,7:17:31.10:589,31,0	1/1:6,10:15:30.08:670,30,0	1/1:4,1:5:5.97:147,6,0	1/1:8,11:19:33.09:763,33,0	1/1:8,13:21:35.82:827,36,0	1/1:5,6:11:18.06:409,18,0	1/1:4,9:12:18.04:418,18,0	0/1:11,7:18:89.59:533,0,90	1/1:4,10:14:33.10:723,33,0	1/1:6,10:16:27.03:620,27,0
chr10	88955023	.	AAAAAAAAC	A	13629.19	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=11.763;DP=524;FS=2.075;HRun=0;HaplotypeScore=199.1642;InbreedingCoeff=0.8722;MQ=60.92;MQ0=3;MQRankSum=-11.711;QD=37.34;ReadPosRankSum=4.690;VQSLOD=4.5950;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,11:19:33.11:691,33,0	0/0:7,0:7:21.07:0,21,646	0/0:44,0:17:26.27:0,26,892	0/0:30,0:18:19.85:0,20,525	1/1:26,0:26:51.17:970,51,0	1/1:27,0:27:78.27:1537,78,0	1/1:15,0:15:30.10:595,30,0	1/1:23,0:23:41.83:750,42,0	1/1:6,9:15:30.10:633,30,0	0/0:26,0:26:66.23:0,66,2009	0/0:26,0:26:60.21:0,60,2055	1/1:10,0:10:18.06:354,18,0	1/1:14,0:14:21.07:396,21,0	1/1:20,0:20:45.15:886,45,0	1/1:17,0:17:38.75:765,39,0	1/1:21,0:21:42.14:825,42,0	0/0:26,0:26:66.23:0,66,2282	1/1:12,0:13:17.92:320,18,0	1/1:15,0:15:27.08:495,27,0	1/1:16,0:15:30.10:574,30,0	1/1:3,1:4:5.97:122,6,0	1/1:18,0:18:33.11:653,33,0	1/1:21,0:21:35.93:709,36,0	1/1:10,0:10:18.06:354,18,0	1/1:13,0:12:21.07:411,21,0	0/1:18,0:18:78.63:449,0,79	1/1:14,0:14:33.07:612,33,0	1/1:16,0:16:27.09:527,27,0
chr10	88955656	.	GAGAA	G	333.65	PASS	AB=0.976;AC=8;AF=0.148;AN=54;BaseQRankSum=2.859;DP=414;FS=2.921;HRun=0;HaplotypeScore=99.3573;InbreedingCoeff=0.0387;MQ=67.05;MQ0=17;MQRankSum=-0.510;QD=3.51;ReadPosRankSum=-2.074;VQSLOD=1.4029;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:17:50.07:50,0,257	0/0:9,0:9:24.02:0,24,347	0/0:26,0:16:17.44:0,17,179	0/0:57,0:26:18.28:0,18,294	0/0:15,0:10:15.12:0,15,99	0/0:17,0:16:35.59:0,36,238	0/0:12,0:9:23.89:0,24,242	0/1:25,5:29:99:174,0,480	0/1:8,0:7:59.92:100,0,60	0/0:17,0:17:51.12:0,51,872	0/0:10,0:10:21.45:0,21,253	0/0:17,0:15:23.69:0,24,159	0/0:7,0:7:5.99:0,6,81	0/0:9,0:8:14.88:0,15,105	1/1:9,0:9:6.01:63,6,0	./.	0/0:31,0:31:72.10:0,72,1398	0/1:13,0:9:30.33:30,0,203	0/0:10,0:7:18.48:0,18,176	0/0:10,0:10:27.84:0,28,272	0/1:7,0:7:21.90:22,0,31	0/0:10,0:8:12.01:0,12,110	0/1:10,0:10:28.04:28,0,80	0/0:12,0:12:8.78:0,9,65	0/0:16,0:10:17.82:0,18,184	0/0:11,0:11:32.93:0,33,345	0/0:6,0:6:8.39:0,8,66	0/0:8,0:6:17.96:0,18,147
chr10	88955660	.	A	AAG	612.93	PASS	AB=0.895;AC=27;AF=0.587;AN=46;BaseQRankSum=4.604;DP=428;FS=10.724;HRun=0;HaplotypeScore=95.5347;InbreedingCoeff=0.3319;MQ=62.81;MQ0=18;MQRankSum=-1.642;QD=2.86;ReadPosRankSum=-1.160;VQSLOD=1.3423;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,8:21:7.80:90,0,8	0/0:9,0:9:6.02:0,6,69	0/0:29,0:15:2.37:0,2,8	0/0:58,0:27:3.13:0,3,55	0/1:15,0:11:0:0,0,0	./.	0/1:11,0:9:0:0,0,0	1/1:28,0:26:15.04:179,15,0	1/1:8,0:7:9.03:122,9,0	0/1:17,1:19:19.62:20,0,227	0/1:10,0:11:0.03:0,0,61	./.	1/1:6,0:6:2.90:16,3,0	./.	1/1:6,0:6:6.02:71,6,0	./.	0/0:31,0:32:53.99:0,54,599	1/1:12,1:9:5.46:66,5,0	0/0:12,0:8:5.31:0,5,42	0/0:10,0:10:8.95:0,9,73	0/1:8,0:8:13.79:25,0,14	0/1:7,0:12:0:0,0,0	1/1:9,0:9:5.91:53,6,0	1/1:10,0:10:0.47:1,0,0	1/1:16,0:10:7.41:68,7,0	1/1:11,0:11:5.83:33,6,0	1/1:6,0:6:0.47:1,0,0	./.
chr10	88955666	.	G	GAAAGAGAGAAAGAGAGAA	3478.54	PASS	AB=0.869;AC=19;AF=0.365;AN=52;BaseQRankSum=1.245;DP=458;FS=11.707;HRun=0;HaplotypeScore=160.2153;InbreedingCoeff=0.2746;MQ=60.36;MQ0=24;MQRankSum=-3.555;QD=20.46;ReadPosRankSum=0.593;VQSLOD=2.1686;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:26:28.89:416,0,29	0/0:8,0:8:18.03:0,18,410	0/0:36,0:14:18.72:0,19,216	0/0:65,0:31:21.17:0,21,366	0/0:16,0:11:10.01:0,10,105	./.	0/0:12,0:10:23.35:0,23,276	0/1:25,0:23:15.31:599,0,15	1/1:12,0:10:3.91:210,4,0	0/0:21,0:21:63.15:0,63,1545	0/0:9,0:9:14.93:0,15,289	0/0:16,0:14:2.94:0,3,18	1/1:1,1:8:6.02:307,6,0	0/0:11,0:9:2.80:0,3,13	1/1:0,0:9:6.02:180,6,0	./.	0/0:30,0:30:66.14:0,66,2368	0/0:12,0:8:17.94:0,18,290	0/1:12,0:6:9.98:10,0,140	0/1:9,0:9:33.88:34,0,98	0/1:1,0:10:10.08:52,0,10	0/0:14,0:12:11.72:0,12,122	1/1:1,6:10:6.49:530,6,0	0/1:3,5:14:5.99:52,0,6	0/1:15,0:10:59.38:75,0,59	1/1:0,3:12:33.06:909,33,0	0/0:5,0:4:1.78:0,2,15	1/1:5,0:3:9.01:105,9,0
chr10	88956294	.	G	GA	8121.16	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-17.031;DP=718;FS=1.797;HRun=3;HaplotypeScore=93.0514;InbreedingCoeff=0.9944;MQ=82.41;MQ0=0;MQRankSum=-1.512;QD=41.02;ReadPosRankSum=1.323;VQSLOD=4.0508;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:76.67:1207,77,0	0/0:4,0:4:12.04:0,12,153	0/0:18,0:18:42.13:0,42,540	0/0:29,0:29:73.09:0,73,961	0/0:28,0:22:63.20:0,63,817	0/0:24,0:24:69.21:0,69,879	0/0:18,0:18:51.17:0,51,661	1/1:0,33:33:99:1481,99,0	1/1:1,26:27:75.25:1124,75,0	0/0:20,0:20:60.18:0,60,766	0/0:16,0:16:42.14:0,42,545	0/0:40,0:40:99:0,120,1540	0/0:37,0:37:99:0,105,1357	0/0:33,0:33:96.30:0,96,1232	0/0:25,0:25:75.24:0,75,974	0/0:20,0:20:57.17:0,57,726	0/0:22,0:22:66.19:0,66,839	0/0:22,0:22:52.68:0,53,752	1/1:0,20:20:60.19:875,60,0	1/1:0,27:26:75.25:1115,75,0	0/0:29,0:29:84.26:0,84,1075	0/0:28,0:19:54.18:0,54,700	0/0:20,0:12:36.12:0,36,461	0/0:27,0:27:78.24:0,78,993	1/1:0,31:26:75.25:1114,75,0	0/0:36,0:31:93.30:0,93,1206	1/1:2,29:30:81.27:1205,81,0	0/0:23,0:20:57.16:0,57,724
chr10	88958044	.	GGATT	G	2748.85	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.966;DP=771;FS=4.141;HRun=0;HaplotypeScore=122.6081;InbreedingCoeff=0.9996;MQ=85.82;MQ0=2;MQRankSum=-5.723;QD=38.18;ReadPosRankSum=4.313;VQSLOD=3.6175;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,43:43:99:1877,102,0	0/0:14,0:14:39.13:0,39,1028	0/0:20,0:20:51.18:0,51,1334	0/0:33,0:33:81.26:0,81,1930	0/0:25,0:25:75.26:0,75,1979	0/0:16,0:16:42.14:0,42,1109	0/0:42,0:42:99:0,120,2961	0/0:40,0:40:99:0,108,2841	1/1:0,27:27:54.19:994,54,0	0/0:23,0:23:60.20:0,60,1526	0/0:22,0:22:60.21:0,60,1565	0/0:33,0:33:99:0,99,2527	0/0:36,0:36:99:0,102,2666	0/0:29,0:29:87.30:0,87,2277	0/0:26,0:26:75.26:0,75,1929	0/0:25,0:25:69.24:0,69,1777	0/0:28,0:28:84.29:0,84,2189	0/0:27,0:27:78.27:0,78,1987	0/0:19,0:19:51.18:0,51,1319	0/0:39,0:39:99:0,108,2796	0/0:38,0:38:99:0,108,2760	0/0:29,0:29:72.25:0,72,1902	0/0:11,0:11:33.11:0,33,862	0/0:34,0:34:96.33:0,96,2441	0/0:22,0:21:54.19:0,54,1414	0/0:29,0:29:84.27:0,84,2164	0/0:25,0:25:69.24:0,69,1791	0/0:14,0:14:30.10:0,30,791
chr10	88958817	.	T	TA	7164.38	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-12.496;DP=575;FS=3.450;HRun=9;HaplotypeScore=61.9400;InbreedingCoeff=0.9969;MQ=80.27;MQ0=0;MQRankSum=-1.522;QD=24.88;ReadPosRankSum=4.401;VQSLOD=5.5735;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:95.91:0,96,821	0/0:10,0:10:26.99:0,27,234	0/0:14,0:15:40.42:0,40,330	0/0:19,0:19:40.48:0,40,329	1/1:3,18:20:36.06:386,36,0	1/1:2,18:20:48.09:517,48,0	1/1:2,17:19:45.12:498,45,0	0/0:41,0:41:95.43:0,95,830	0/0:27,0:27:59.97:0,60,521	0/0:20,0:20:47.82:0,48,394	0/0:15,0:15:35.89:0,36,302	1/1:5,11:16:24.40:265,24,0	1/1:4,17:21:54.10:582,54,0	1/1:1,19:20:57.15:630,57,0	1/1:2,27:30:78.04:844,78,0	1/1:5,14:19:45.10:488,45,0	0/0:21,0:21:56.78:0,57,495	1/1:4,24:28:43.14:704,43,0	0/0:22,0:22:56.92:0,57,481	0/0:18,0:18:50.99:0,51,443	1/1:2,17:19:20.09:440,20,0	1/1:2,12:14:33.05:352,33,0	1/1:4,12:16:27.07:298,27,0	1/1:1,11:12:33.09:365,33,0	0/0:20,0:20:50.44:0,50,418	1/1:6,15:20:16.04:397,16,0	0/0:23,0:23:50.98:0,51,443	1/1:0,12:12:36.10:398,36,0
chr10	88958961	.	T	TACAC	1721.38	PASS	AC=24;AF=0.522;AN=46;BaseQRankSum=-6.046;DP=439;FS=2.050;HRun=0;HaplotypeScore=97.9034;InbreedingCoeff=0.6908;MQ=71.54;MQ0=8;MQRankSum=4.377;QD=9.56;ReadPosRankSum=-1.783;VQSLOD=2.1838;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:3:0,3,28	1/1:5,0:5:6.01:70,6,0	./.	./.	./.	0/0:5,0:7:6.48:0,6,56	0/0:26,0:29:11.04:0,11,89	./.	0/0:11,0:14:9.01:0,9,84	1/1:13,0:13:12.51:245,13,0	1/1:15,0:16:3.99:15,4,0	0/0:3,0:4:3:0,3,28	1/1:3,2:8:3.73:72,4,0	0/0:2,0:5:6.01:0,6,56	1/1:16,0:18:17.50:167,18,0	1/1:18,0:18:12.02:151,12,0	1/1:6,9:19:11.78:223,12,0	0/0:19,0:18:1.64:0,2,25	./.	0/0:19,0:26:15.02:0,15,140	1/1:30,0:30:21.05:315,21,0	0/0:10,0:13:6.01:0,6,56	1/1:18,0:18:9.03:159,9,0	1/1:18,1:20:17.74:219,18,0	0/0:2,0:7:5.93:0,6,56	1/1:12,0:12:14.98:152,15,0	0/0:12,0:14:6.01:0,6,56	1/1:1,1:3:8.73:104,9,0
chr10	88959152	.	AGTGTGTGTGTGTGTGTGTG	A	2214.29	PASS	AB=0.987;AC=39;AF=0.696;AN=56;BaseQRankSum=2.134;DP=599;FS=22.894;HRun=0;HaplotypeScore=179.6249;InbreedingCoeff=0.5908;MQ=49.86;MQ0=74;MQRankSum=-0.439;QD=6.05;ReadPosRankSum=1.688;VQSLOD=1.4857;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:8:2.92:38,3,0	0/0:4,0:4:12.04:0,12,639	0/0:73,0:19:14.91:0,15,198	0/0:70,0:25:22.22:0,22,304	0/1:22,0:20:0:0,0,0	1/1:15,0:13:0.89:2,1,0	1/1:19,0:14:11.06:116,11,0	0/0:21,0:21:28.07:0,28,474	1/1:13,7:17:3.01:155,3,0	0/0:20,0:20:40.68:0,41,858	0/0:14,0:14:16.50:0,16,769	1/1:16,1:8:6.02:193,6,0	1/1:11,0:7:2.77:37,3,0	1/1:11,0:9:0.89:3,1,0	1/1:9,10:18:3.01:120,3,0	0/1:24,0:18:15.59:401,0,16	0/0:30,0:30:55.57:0,56,2263	1/1:21,0:10:9.03:114,9,0	1/1:11,0:9:6.02:95,6,0	1/1:15,0:11:6.02:82,6,0	1/1:32,0:23:18.06:229,18,0	1/1:3,5:8:3.01:77,3,0	1/1:15,0:8:6.02:77,6,0	0/1:29,0:18:0:0,0,1	1/1:14,0:9:15.18:136,15,0	1/1:18,0:13:21.07:267,21,0	1/1:20,0:10:12.51:173,13,0	1/1:6,0:4:6.02:76,6,0
chr10	88959154	.	TGTGTGTGTGTGTGTGTG	T	2276.61	PASS	AB=0.889;AC=39;AF=0.696;AN=56;BaseQRankSum=1.956;DP=595;FS=22.822;HRun=0;HaplotypeScore=160.7800;InbreedingCoeff=0.5868;MQ=45.84;MQ0=77;MQRankSum=-0.711;QD=6.22;ReadPosRankSum=1.196;VQSLOD=1.3985;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:7:2.97:38,3,0	0/0:4,0:4:12.04:0,12,522	0/0:70,0:16:14.92:0,15,185	0/0:69,0:24:22.94:0,23,298	0/1:11,11:20:0:0,0,0	1/1:15,0:13:3.48:34,3,0	1/1:20,0:14:12.04:148,12,0	0/0:20,0:20:27.71:0,28,454	1/1:18,0:15:3.01:122,3,0	0/0:20,0:20:40.68:0,41,774	0/0:16,0:16:20.08:0,20,737	1/1:18,0:8:6.02:160,6,0	1/1:8,0:4:2.77:37,3,0	1/1:11,0:9:3.01:38,3,0	1/1:18,0:17:3.01:87,3,0	0/1:23,0:16:15.42:347,0,15	0/0:30,0:29:55.52:0,56,2023	1/1:21,0:10:9.03:114,9,0	1/1:10,0:8:6.02:121,6,0	1/1:18,0:13:5.98:108,6,0	1/1:34,0:23:18.06:229,18,0	1/1:8,0:8:3.01:45,3,0	1/1:16,0:8:6.02:77,6,0	0/1:29,0:18:0.17:0,0,0	1/1:14,0:8:17.03:209,17,0	1/1:18,0:13:21.07:267,21,0	1/1:21,0:11:11.71:197,12,0	1/1:6,0:4:6.02:76,6,0
chr10	88959156	.	TGTGTGTGTGTGTGTG	T	2370.07	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=2.455;DP=594;FS=16.940;HRun=0;HaplotypeScore=145.4940;InbreedingCoeff=0.4541;MQ=45.32;MQ0=81;MQRankSum=-0.592;QD=6.16;ReadPosRankSum=0.242;VQSLOD=1.8622;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:8:5.84:53,6,0	0/0:4,0:4:12.04:0,12,543	0/0:70,0:16:14.92:0,15,162	0/0:69,0:24:23.10:0,23,280	0/1:21,0:19:0:0,0,0	1/1:15,0:13:3.41:20,3,0	1/1:21,0:13:12.04:151,12,0	0/0:17,0:17:13.61:0,14,409	1/1:17,0:14:3.01:108,3,0	0/0:20,0:20:40.68:0,41,642	0/1:17,0:17:13.58:14,0,589	1/1:17,0:7:6.02:146,6,0	1/1:8,0:4:2.76:37,3,0	1/1:11,0:9:3.01:38,3,0	1/1:17,0:16:3.01:73,3,0	0/1:23,0:16:15.56:282,0,16	0/0:29,0:28:55.52:0,56,1826	1/1:21,0:10:9.03:114,9,0	1/1:6,2:6:6.02:166,6,0	1/1:17,1:13:5.97:152,6,0	1/1:35,0:22:18.06:229,18,0	1/1:7,0:7:3.01:31,3,0	1/1:16,0:8:6.02:77,6,0	0/1:30,0:18:0.21:0,0,0	1/1:14,0:8:17.62:223,18,0	0/1:19,0:14:30.62:243,0,31	1/1:20,1:11:15.05:280,15,0	1/1:10,0:6:11.82:108,12,0
chr10	88959171	.	G	GA	1077.22	PASS	AB=0.917;AC=38;AF=0.679;AN=56;BaseQRankSum=4.926;DP=551;FS=16.280;HRun=0;HaplotypeScore=75.4695;InbreedingCoeff=0.4257;MQ=32.42;MQ0=103;MQRankSum=0.149;QD=3.02;ReadPosRankSum=-3.578;VQSLOD=0.5377;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:6:8.69:68,9,0	0/0:5,0:5:14.91:0,15,125	0/0:54,0:6:15.01:0,15,176	0/0:49,0:8:23.86:0,24,285	0/0:15,0:14:0.94:0,1,2	1/1:10,0:9:2.59:20,3,0	1/1:18,0:10:14.45:90,14,0	0/0:18,0:16:0.34:0,0,381	1/1:10,0:9:7.42:45,7,0	0/0:14,0:20:18.78:0,19,462	0/1:12,0:17:16.97:17,0,232	1/1:15,1:7:1.26:26,1,0	1/1:8,0:5:1.71:16,2,0	1/1:10,0:6:5.77:47,6,0	1/1:13,1:12:6.02:77,6,0	0/1:22,0:16:15.46:114,0,15	0/0:25,0:27:59.81:0,60,722	1/1:18,0:7:8.74:52,9,0	0/1:8,0:5:0.19:16,0,0	1/1:15,0:10:11.39:64,11,0	1/1:30,4:21:20.29:96,20,0	1/1:11,1:11:3.48:42,3,0	1/1:12,0:6:8.65:65,9,0	1/1:21,0:13:0.68:2,1,0	1/1:14,0:10:17.41:97,17,0	0/1:14,1:8:16.72:96,0,17	1/1:16,1:12:12.40:85,12,0	1/1:8,0:4:11.92:112,12,0
chr10	88959173	.	T	TA	228.48	PASS	AB=0.936;AC=8;AF=0.143;AN=56;BaseQRankSum=2.018;DP=570;FS=1.142;HRun=0;HaplotypeScore=80.5398;InbreedingCoeff=0.0288;MQ=34.06;MQ0=103;MQRankSum=-2.060;QD=1.76;ReadPosRankSum=-1.853;VQSLOD=2.0624;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,1:7:18.85:39,0,19	0/0:5,0:5:15.01:0,15,147	0/0:54,0:7:17.85:0,18,217	0/0:52,0:10:26.88:0,27,336	0/0:19,0:14:2.65:0,3,18	0/0:14,0:11:5.81:0,6,54	0/0:20,0:11:13.78:0,14,72	0/0:20,0:18:43.12:0,43,504	0/1:11,1:9:2.05:26,0,2	0/0:20,0:19:50.88:0,51,579	0/0:19,0:19:31.73:0,32,371	0/1:19,1:8:12.96:39,0,13	0/1:12,0:7:22.46:22,0,34	0/0:11,0:6:5.71:0,6,32	0/0:15,0:12:8.60:0,9,52	0/1:16,6:15:61.81:208,0,62	0/0:29,0:28:68.61:0,69,855	0/0:21,0:7:8.83:0,9,54	0/0:9,0:6:4.39:0,4,16	0/0:16,0:9:11.22:0,11,74	0/0:39,0:23:18.48:0,18,121	0/1:15,0:14:13.93:14,0,74	0/0:16,0:6:10.62:0,11,71	1/1:26,1:14:0.68:2,1,0	0/0:16,0:10:23.35:0,23,175	0/0:15,0:8:22.94:0,23,157	0/0:22,0:12:22.85:0,23,139	0/0:8,0:4:9.24:0,9,44
chr10	88959390	.	C	CT	10665.78	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=3.362;DP=563;FS=7.044;HRun=9;HaplotypeScore=91.5622;InbreedingCoeff=0.9639;MQ=73.41;MQ0=0;MQRankSum=-1.010;QD=25.95;ReadPosRankSum=2.597;VQSLOD=5.0110;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:21:63.17:696,63,0	0/0:7,0:7:14.99:0,15,130	0/0:19,1:20:24.03:0,24,265	0/0:9,0:9:8:0,8,58	1/1:6,14:21:53.92:556,54,0	1/1:3,22:25:69.19:763,69,0	1/1:6,14:20:13.25:372,13,0	0/0:6,0:34:50.85:0,51,151	1/1:2,11:13:33.09:365,33,0	0/0:30,0:30:71.96:0,72,625	0/0:12,0:12:26.90:0,27,225	1/1:5,16:21:54.03:566,54,0	1/1:10,19:29:63.11:674,63,0	1/1:4,17:21:13.15:390,13,0	1/1:5,17:22:60.11:647,60,0	1/1:3,14:17:33.09:365,33,0	0/0:40,0:40:99:0,102,876	1/1:7,16:23:31.09:561,31,0	1/1:5,14:19:45.10:487,45,0	1/1:4,13:17:22.04:458,22,0	1/1:3,7:10:21.06:232,21,0	1/1:5,21:26:63.17:695,63,0	1/1:3,9:12:10.03:331,10,0	1/1:3,11:14:39.07:419,39,0	1/1:4,19:23:34.07:590,34,0	1/1:3,20:23:60.16:663,60,0	1/1:10,15:25:37.26:604,37,0	1/1:0,7:7:21.06:232,21,0
chr10	88960908	.	TA	T	18725.40	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=7.770;DP=705;FS=4.773;HRun=2;HaplotypeScore=75.2364;InbreedingCoeff=0.9998;MQ=95.51;MQ0=0;MQRankSum=-8.426;QD=36.36;ReadPosRankSum=3.592;VQSLOD=5.5850;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:99:1363,105,0	0/0:10,0:10:27.09:0,27,405	0/0:35,0:35:85.98:0,86,1352	0/0:31,0:31:65.44:0,65,1107	1/1:1,31:32:90.29:1168,90,0	1/1:0,18:18:45.15:584,45,0	1/1:0,19:19:54.18:701,54,0	1/1:1,30:31:90.27:1140,90,0	1/1:1,17:18:48.13:623,48,0	0/0:27,0:27:78.26:0,78,1169	0/0:24,0:24:69.23:0,69,1034	1/1:1,22:23:66.21:852,66,0	1/1:0,24:24:66.21:857,66,0	1/1:2,14:16:42.14:545,42,0	1/1:0,33:33:99:1286,99,0	1/1:1,24:25:72.23:935,72,0	0/0:32,0:32:90.30:0,90,1349	1/1:0,20:20:51.17:662,51,0	1/1:1,19:20:54.16:686,54,0	1/1:0,19:19:51.17:661,51,0	1/1:0,24:24:66.21:857,66,0	1/1:0,24:24:69.22:896,69,0	1/1:0,32:32:90.29:1168,90,0	1/1:0,36:36:99:1363,105,0	0/0:31,0:31:90.30:0,90,1349	1/1:0,24:24:72.23:935,72,0	1/1:0,20:20:57.19:740,57,0	1/1:0,20:20:54.18:701,54,0
chr10	88961378	.	TGTC	T	1091.03	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=1.927;DP=397;FS=1.598;HRun=0;HaplotypeScore=122.9330;InbreedingCoeff=0.7995;MQ=61.58;MQ0=0;MQRankSum=-3.088;QD=10.80;ReadPosRankSum=-2.176;VQSLOD=3.0012;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:44.72:0,45,517	0/0:3,0:3:8.99:0,9,96	0/0:25,0:16:2.83:0,3,195	0/1:22,0:12:29.64:30,0,109	1/1:14,1:15:25.46:205,25,0	1/1:15,1:16:44.82:312,45,0	1/1:6,1:7:13.18:97,13,0	0/0:12,0:12:32.96:0,33,389	0/0:4,0:4:8.94:0,9,77	0/0:14,0:14:41.81:0,42,582	0/0:10,0:10:23.83:0,24,233	1/1:13,0:13:24.76:177,25,0	0/0:11,0:11:24.23:0,24,193	1/1:9,1:10:23.41:161,23,0	0/0:8,0:8:8.71:0,9,60	0/0:15,0:15:35.47:0,35,316	0/0:9,0:9:4.60:0,5,199	1/1:6,0:6:12.31:83,12,0	0/0:14,0:14:30.70:0,31,421	0/0:24,0:24:7.80:0,8,271	0/0:26,0:26:35.68:0,36,408	1/1:10,2:12:25.26:221,25,0	0/0:12,0:12:23.32:0,23,280	0/0:19,0:19:32.62:0,33,320	0/0:21,0:21:16.29:0,16,363	0/0:25,0:25:57.63:0,58,531	0/0:17,0:17:13.03:0,13,278	0/0:10,0:10:19.12:0,19,158
chr10	88961385	.	CTCT	C	4535.03	PASS	AB=0.967;AC=45;AF=0.804;AN=56;BaseQRankSum=-2.810;DP=355;FS=8.228;HRun=0;HaplotypeScore=105.7586;InbreedingCoeff=-0.2334;MQ=58.14;MQ0=0;MQRankSum=-1.356;QD=12.77;ReadPosRankSum=-2.894;VQSLOD=3.3939;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:57.21:92,0,57	1/1:4,0:4:8.94:69,9,0	0/1:16,0:9:16.48:16,0,19	0/1:18,0:10:16.20:16,0,26	1/1:15,0:15:24.19:192,24,0	1/1:15,0:15:41.51:295,42,0	1/1:5,0:5:5.95:44,6,0	0/1:12,0:12:16.48:161,0,16	1/1:2,0:2:2.98:21,3,0	0/1:14,0:14:56.46:92,0,56	1/1:9,0:9:14.35:127,14,0	1/1:12,0:12:26.74:194,27,0	1/1:8,2:10:20.97:147,21,0	1/1:7,0:7:17.72:126,18,0	1/1:2,5:7:20.80:187,21,0	1/1:9,3:12:26.83:208,27,0	0/1:10,0:10:36.56:63,0,37	0/1:5,0:5:4.44:74,0,4	0/1:9,0:9:24.82:73,0,25	1/1:13,10:23:48.40:484,48,0	0/1:23,0:23:8.07:82,0,8	1/1:14,0:14:25.29:222,25,0	1/1:10,2:12:26.09:242,26,0	1/1:16,1:17:7.12:96,7,0	1/1:11,9:20:20.29:403,20,0	0/1:20,3:23:2.87:347,0,3	0/1:10,5:15:6.94:214,0,7	1/1:6,4:10:26.51:251,27,0
chr10	88962200	.	TC	T	14250.62	PASS	AB=0.667;AC=53;AF=0.946;AN=56;BaseQRankSum=-2.467;DP=376;FS=2.333;HRun=1;HaplotypeScore=97.2520;InbreedingCoeff=0.4041;MQ=53.65;MQ0=0;MQRankSum=0.329;QD=38.21;ReadPosRankSum=2.150;VQSLOD=5.2767;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:39.13:545,39,0	1/1:0,2:2:6.02:84,6,0	0/1:1,1:2:14.84:36,0,15	0/0:3,0:3:5.85:0,6,62	1/1:0,25:25:69.23:962,69,0	1/1:1,17:18:48.12:649,48,0	1/1:0,5:5:12.04:168,12,0	1/1:0,43:43:99:1784,129,0	1/1:0,8:8:24.08:335,24,0	1/1:0,20:20:57.17:779,57,0	1/1:0,27:27:69.23:965,69,0	1/1:0,11:11:33.08:440,33,0	1/1:0,14:14:39.13:545,39,0	1/1:0,13:13:36.12:503,36,0	1/1:0,17:17:48.12:649,48,0	1/1:0,11:11:33.08:440,33,0	1/1:0,9:9:27.09:377,27,0	1/1:0,14:14:42.14:587,42,0	1/1:0,11:11:30.10:419,30,0	1/1:0,16:16:39.09:523,39,0	1/1:0,3:3:9.03:126,9,0	1/1:0,4:4:9.03:126,9,0	1/1:0,11:11:30.10:419,30,0	1/1:0,3:3:3.01:42,3,0	1/1:0,18:18:54.09:711,54,0	1/1:0,20:20:57.17:779,57,0	1/1:0,23:23:66.22:923,66,0	1/1:0,10:10:24.08:335,24,0
chr10	88962260	.	TCCG	T	1881.93	PASS	AC=50;AF=0.962;AN=52;BaseQRankSum=0.835;DP=261;FS=10.018;HRun=0;HaplotypeScore=294.6421;InbreedingCoeff=0.4817;MQ=36.54;MQ0=0;MQRankSum=-3.122;QD=7.32;ReadPosRankSum=1.231;VQSLOD=1.5562;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:6.68:23,7,0	1/1:0,4:4:9.16:31,9,0	0/0:2,0:2:5.80:0,6,42	./.	1/1:0,15:15:24.73:75,25,0	1/1:0,13:13:31.81:113,32,0	1/1:0,4:4:9:29,9,0	1/1:0,8:8:21.54:90,22,0	1/1:0,9:9:15.17:63,15,0	1/1:0,15:15:26.80:117,27,0	1/1:0,17:17:29.16:88,29,0	1/1:0,10:10:23.17:78,23,0	1/1:0,4:4:1.03:8,1,0	1/1:0,12:12:16.71:54,17,0	1/1:0,15:15:34.84:115,35,0	1/1:0,15:15:35.85:123,36,0	1/1:0,3:3:6.90:23,7,0	1/1:0,3:3:8.15:35,8,0	1/1:0,13:13:35.22:150,35,0	1/1:0,16:16:34.48:110,34,0	./.	1/1:0,5:5:11.45:38,11,0	1/1:0,13:13:27.66:86,28,0	1/1:0,3:3:3.11:8,3,0	1/1:0,16:16:37.41:125,37,0	1/1:0,7:8:19.65:80,20,0	1/1:1,7:8:16.21:55,16,0	1/1:0,25:25:65.77:261,66,0
chr10	88962787	.	G	GGGAGCAGTTCAA	51631.01	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-10.269;DP=658;FS=18.401;HRun=0;HaplotypeScore=170.6136;InbreedingCoeff=0.9667;MQ=75.38;MQ0=0;MQRankSum=-18.132;QD=113.98;ReadPosRankSum=0.946;VQSLOD=3.4905;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.22:0,69,2476	0/0:8,0:8:24.08:0,24,912	0/0:25,0:25:72.03:0,72,2257	0/0:26,0:26:75.26:0,75,2483	1/1:5,7:17:30.10:1351,30,0	1/1:3,8:23:33.11:2019,33,0	1/1:5,11:22:45.15:2395,45,0	1/1:17,9:44:99:5203,117,0	0/0:29,0:29:87.30:0,87,3262	0/0:33,0:33:96.31:0,96,3320	0/0:29,0:29:84.29:0,84,3114	1/1:7,11:25:48.12:2674,48,0	1/1:4,12:20:42.14:2586,42,0	1/1:6,24:42:84.29:4985,84,0	1/1:8,22:40:87.30:5043,87,0	1/1:3,14:24:51.18:3044,51,0	0/0:30,0:30:90.30:0,90,3174	1/1:4,7:16:33.11:1894,33,0	1/1:6,4:18:54.10:2372,54,0	1/1:2,8:14:30.10:1689,30,0	1/1:4,4:15:15.05:654,15,0	1/1:3,15:24:51.18:3004,51,0	1/1:7,15:28:54.05:2902,54,0	1/1:3,6:13:18.05:1075,18,0	1/1:5,12:19:39.13:2277,39,0	1/1:6,11:23:63.19:3306,63,0	1/1:6,12:23:51.18:2973,51,0	1/1:2,0:2:3.01:186,3,0
chr10	88963087	.	C	CACTTCACCACAGCTGA	84276.93	PASS	AB=0.790;AC=40;AF=0.714;AN=56;BaseQRankSum=-3.407;DP=752;FS=5.218;HRun=0;HaplotypeScore=265.9605;InbreedingCoeff=0.8248;MQ=75.03;MQ0=0;MQRankSum=-19.116;QD=146.82;ReadPosRankSum=0.303;VQSLOD=4.1880;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,4574	0/0:11,0:11:33.10:0,33,1334	0/0:24,0:24:60.21:0,60,2036	0/0:22,0:22:61.45:0,61,2472	1/1:7,7:19:36.04:1571,36,0	1/1:11,14:27:69.24:4715,69,0	1/1:16,10:33:63.22:4240,63,0	1/1:26,1:30:69.24:4162,69,0	0/1:30,1:31:99:144,0,3780	0/0:28,0:28:78.25:0,78,3136	0/0:28,0:28:84.29:0,84,3659	1/1:15,12:29:72.21:4689,72,0	1/1:11,13:28:69.24:5094,69,0	1/1:10,17:29:72.25:5213,72,0	1/1:22,26:54:99:9161,138,0	0/1:15,22:41:36.47:7391,0,36	0/0:27,0:27:78.25:0,78,3443	1/1:9,7:16:45.15:3388,45,0	1/1:18,2:24:63.22:3282,63,0	1/1:13,12:26:57.11:3542,57,0	1/1:9,5:18:33.03:1963,33,0	1/1:13,8:25:51.13:2995,51,0	1/1:12,12:25:60.12:3892,60,0	1/1:13,8:23:36.08:2022,36,0	1/1:8,6:18:42.14:2775,42,0	1/1:10,16:30:87.30:5984,87,0	1/1:21,10:37:93.25:5952,93,0	1/1:5,4:11:30.10:2104,30,0
chr10	88970707	.	A	AAGAG	16532.15	PASS	AB=0.583;AC=39;AF=0.696;AN=56;BaseQRankSum=4.700;DP=408;FS=75.606;HRun=0;HaplotypeScore=100.8016;InbreedingCoeff=0.8911;MQ=68.92;MQ0=0;MQRankSum=-13.882;QD=59.68;ReadPosRankSum=-1.004;VQSLOD=1.8718;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:45.15:0,45,800	0/0:7,0:7:21.07:0,21,359	0/0:16,0:15:39.13:0,39,686	0/0:14,0:13:24.08:0,24,401	1/1:4,12:16:33.11:857,33,0	1/1:1,13:15:39.13:1025,39,0	1/1:0,4:4:9.03:237,9,0	1/1:9,16:26:51.05:1016,51,0	0/0:9,0:9:27.08:0,27,466	0/0:26,0:26:69.23:0,69,1244	0/0:17,0:17:51.15:0,51,880	1/1:0,13:13:36.12:946,36,0	1/1:2,9:11:27.09:709,27,0	1/1:2,11:13:33.11:862,33,0	1/1:1,10:11:30.10:788,30,0	1/1:4,17:21:51.18:1321,51,0	0/0:24,0:24:63.19:0,63,1100	1/1:0,9:9:21.07:512,21,0	1/1:4,13:17:42.14:1087,42,0	1/1:1,13:14:33.11:867,33,0	1/1:1,3:4:3.01:57,3,0	1/1:3,18:21:48.05:1260,48,0	1/1:1,12:13:36.12:945,36,0	1/1:2,5:7:9.03:236,9,0	1/1:0,13:13:36.12:946,36,0	0/1:6,15:21:4.05:1107,0,4	1/1:3,12:16:39.13:1024,39,0	1/1:2,9:11:30.05:729,30,0
chr10	88970775	.	T	TCTGTGTACAGGAA	5623.68	PASS	AB=0.941;AC=26;AF=0.591;AN=44;BaseQRankSum=1.545;DP=158;FS=1.534;HRun=0;HaplotypeScore=83.5178;InbreedingCoeff=0.4066;MQ=84.18;MQ0=1;MQRankSum=-6.553;QD=67.76;ReadPosRankSum=1.279;VQSLOD=4.1660;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:4:6.01:150,6,0	0/0:2,0:2:6.02:0,6,250	0/1:11,0:7:16.98:17,0,147	0/0:21,0:10:16.43:0,16,459	./.	1/1:1,1:2:3.01:124,3,0	1/1:0,1:1:3.01:203,3,0	0/1:26,0:27:88.69:1818,0,89	0/0:2,0:2:3.01:0,3,36	0/0:14,0:14:39.13:0,39,1389	0/0:20,0:20:57.06:0,57,2067	./.	1/1:1,3:4:9.03:463,9,0	1/1:4,0:4:3.01:124,3,0	1/1:1,1:2:6.02:307,6,0	1/1:0,2:3:9.03:393,9,0	0/0:12,0:12:33.09:0,33,1155	0/0:1,0:1:2.88:0,3,15	1/1:4,0:4:5.44:175,5,0	./.	./.	./.	0/1:1,0:1:0:0,0,0	./.	1/1:2,1:3:3.91:157,4,0	0/1:3,1:4:41.89:255,0,42	1/1:2,3:6:15.05:771,15,0	1/1:5,2:7:11.88:665,12,0
chr10	88970779	.	T	TGTACAGG	2483.84	PASS	AB=0.961;AC=22;AF=0.500;AN=44;BaseQRankSum=5.746;DP=164;FS=2.636;HRun=0;HaplotypeScore=82.2137;InbreedingCoeff=0.1973;MQ=79.96;MQ0=3;MQRankSum=-6.616;QD=31.44;ReadPosRankSum=-1.986;VQSLOD=2.9076;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:3.01:70,3,0	0/0:2,0:2:6.02:0,6,166	0/0:9,0:5:0.74:0,1,26	0/0:24,0:10:11.31:0,11,409	./.	1/1:2,0:2:3.01:70,3,0	1/1:2,0:2:2.98:90,3,0	0/1:29,1:29:99:768,0,411	0/1:2,0:2:11.93:12,0,24	0/0:13,0:13:39.13:0,39,970	0/0:22,0:22:57.20:0,57,1458	./.	1/1:4,0:4:9.03:274,9,0	1/1:3,1:4:3.01:71,3,0	0/1:3,0:3:21.74:66,0,22	1/1:5,0:5:8.74:232,9,0	0/0:11,0:11:30.09:0,30,753	0/0:1,0:1:3:0,3,27	0/1:3,0:3:7.71:8,0,26	./.	./.	./.	0/0:1,0:1:0:0,0,0	./.	0/1:3,0:3:26.93:84,0,27	0/1:3,1:4:99:139,0,148	1/1:5,1:6:15.05:432,15,0	1/1:9,0:9:12.02:316,12,0
chr10	88970791	.	T	TC	1020.16	PASS	AB=0.972;AC=34;AF=0.680;AN=50;BaseQRankSum=3.539;DP=224;FS=37.357;HRun=0;HaplotypeScore=60.0499;InbreedingCoeff=0.2956;MQ=85.48;MQ0=4;MQRankSum=-1.886;QD=8.03;ReadPosRankSum=-2.832;VQSLOD=0.9210;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:11,0:7:4.16:4,0,95	0/0:29,0:15:30.02:0,30,359	1/1:0,3:3:3.01:44,3,0	1/1:4,1:4:9.03:127,9,0	0/1:4,0:4:1.82:115,0,2	0/1:37,0:35:15.91:110,0,16	1/1:4,0:4:3.85:11,4,0	0/0:16,0:16:47.98:0,48,605	0/0:25,0:25:69.06:0,69,912	./.	1/1:6,0:6:6.48:86,6,0	1/1:5,0:5:3.01:42,3,0	1/1:5,1:6:12.17:121,12,0	1/1:6,1:7:9.02:128,9,0	0/0:11,0:11:29.99:0,30,375	1/1:2,0:2:2.90:16,3,0	1/1:4,0:4:6.51:27,7,0	0/1:3,0:3:7.94:16,0,8	1/1:4,0:4:6.01:68,6,0	1/1:4,0:4:6.02:85,6,0	1/1:0,5:5:3.01:45,3,0	1/1:1,0:1:3.01:42,3,0	1/1:3,0:3:2.67:11,3,0	0/1:4,1:5:32.60:77,0,33	0/1:8,0:8:0.29:0,0,20	0/0:9,0:9:1.85:0,2,6
chr10	88970792	.	A	ATTC	3411.05	PASS	AB=1.000;AC=40;AF=0.769;AN=52;BaseQRankSum=1.832;DP=233;FS=29.601;HRun=0;HaplotypeScore=51.8624;InbreedingCoeff=0.5126;MQ=84.46;MQ0=4;MQRankSum=-5.295;QD=24.54;ReadPosRankSum=-4.072;VQSLOD=1.2334;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:2,0:2:2.99:0,3,23	0/1:11,0:7:15.46:15,0,137	0/0:29,0:15:28.99:0,29,362	1/1:3,0:3:8.94:82,9,0	1/1:5,0:6:9.03:133,9,0	1/1:3,0:3:9.03:131,9,0	1/1:4,27:33:78.44:1488,78,0	1/1:4,0:8:8.89:64,9,0	0/0:16,0:16:45.15:0,45,790	0/0:25,0:25:69.15:0,69,1213	./.	1/1:3,0:7:11.58:117,12,0	1/1:2,0:5:8.94:84,9,0	1/1:4,0:6:11.53:146,12,0	1/1:5,0:6:14.99:177,15,0	0/0:11,0:11:30.08:0,30,503	1/1:0,0:2:3.01:52,3,0	1/1:2,0:4:9.94:146,10,0	1/1:4,0:4:11.93:166,12,0	1/1:6,0:6:6.01:70,6,0	1/1:3,0:3:6.02:88,6,0	1/1:5,0:5:2.85:41,3,0	1/1:2,0:2:3.01:44,3,0	1/1:1,0:3:3.01:64,3,0	0/1:4,0:4:43.24:112,0,43	1/1:3,1:6:11.93:127,12,0	1/1:0,0:9:9.39:63,9,0
chr10	88971171	.	GGT	G	524.20	PASS	AB=0.941;AC=18;AF=0.375;AN=48;BaseQRankSum=1.569;DP=515;FS=7.567;HRun=0;HaplotypeScore=65.1774;InbreedingCoeff=0.2688;MQ=59.26;MQ0=48;MQRankSum=0.025;QD=2.34;ReadPosRankSum=1.500;VQSLOD=0.7109;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:18:17.93:0,18,189	0/1:6,0:6:0:0,0,0	./.	./.	1/1:10,1:13:2.73:14,3,0	1/1:12,1:16:17.71:157,18,0	0/1:17,6:23:32.19:85,0,32	0/0:16,0:14:5.93:0,6,39	0/0:12,0:10:3.01:0,3,44	0/1:16,0:16:16.74:17,0,118	0/0:15,0:14:18.06:0,18,256	1/1:8,3:11:3.01:32,3,0	0/0:19,0:15:12.04:0,12,171	1/1:9,8:17:12.02:129,12,0	0/0:15,0:15:9.02:0,9,110	0/0:8,0:9:3.01:0,3,37	0/1:29,1:28:22.11:22,0,199	0/1:18,2:19:26.66:83,0,27	./.	./.	0/0:29,0:22:3.01:0,3,41	1/1:10,5:14:2.99:32,3,0	0/0:6,0:10:6.01:0,6,64	0/1:39,0:37:1.97:2,0,282	1/1:10,3:13:9.02:97,9,0	0/0:11,0:11:12.88:0,13,154	0/0:8,0:7:0:0,0,0	0/0:13,0:12:3:0,3,26
chr10	88971413	.	TA	T	2202.61	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=6.009;DP=459;FS=1.388;HRun=10;HaplotypeScore=52.9004;InbreedingCoeff=0.9186;MQ=68.76;MQ0=14;MQRankSum=1.513;QD=16.20;ReadPosRankSum=0.608;VQSLOD=3.7841;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:0,0:32:72.96:0,73,346	0/0:12,0:11:33.05:0,33,347	0/1:21,0:10:7.53:8,0,73	0/0:25,0:13:22.32:0,22,235	0/0:26,0:26:78.18:0,78,845	0/0:23,2:25:43.14:0,43,694	0/0:18,0:16:45.11:0,45,489	0/0:13,0:10:24.06:0,24,258	0/0:1,0:5:14.17:0,14,74	0/0:14,0:14:36.10:0,36,396	0/0:12,0:12:36.10:0,36,398	0/0:18,0:18:54.15:0,54,597	1/1:2,19:21:53.99:469,54,0	0/0:14,0:15:44.95:0,45,479	1/1:1,15:16:41.99:364,42,0	1/1:1,10:11:24:208,24,0	0/0:17,1:18:36.72:0,37,524	0/0:13,1:14:16.06:0,16,405	0/0:16,0:16:42.10:0,42,457	0/0:15,0:15:45.11:0,45,489	1/1:0,9:9:18:156,18,0	0/0:15,0:15:45.12:0,45,494	1/1:0,10:10:23.99:208,24,0	1/1:1,9:10:19.14:179,19,0	0/0:13,0:13:39.08:0,39,410	1/1:1,21:20:26.78:453,27,0	0/0:17,0:17:51.05:0,51,538	1/1:0,16:16:41.99:365,42,0
chr10	88971623	.	TTTTTTGG	T	2404.88	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=1.359;DP=520;FS=1.160;HRun=0;HaplotypeScore=164.6094;InbreedingCoeff=0.9497;MQ=74.16;MQ0=5;MQRankSum=-4.039;QD=27.33;ReadPosRankSum=0.652;VQSLOD=3.5553;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:34.31:0,34,661	0/0:13,0:13:24.05:0,24,708	0/0:35,0:23:20.66:0,21,258	0/0:42,0:19:5.36:0,5,201	1/1:11,0:11:21.03:327,21,0	1/1:18,1:19:33.01:595,33,0	1/1:10,1:11:8.99:142,9,0	0/0:33,0:29:72.23:0,72,1707	0/0:17,0:17:42.10:0,42,1058	0/0:21,0:21:54.15:0,54,1470	0/0:16,0:15:33.11:0,33,869	1/1:14,1:15:33.11:590,33,0	0/0:20,0:20:45.14:0,45,1167	1/1:12,2:14:27.09:507,27,0	0/0:22,0:22:33.11:0,33,984	0/0:7,0:7:12.03:0,12,278	0/0:28,0:28:58.82:0,59,2006	1/1:10,0:9:17.90:304,18,0	0/0:24,0:24:34.99:0,35,531	0/0:14,0:14:30.09:0,30,765	0/0:10,0:10:18.03:0,18,341	1/1:8,0:8:11.87:134,12,0	0/0:10,0:9:21.05:0,21,457	0/0:18,0:18:39.28:0,39,864	0/0:21,0:21:48.12:0,48,1128	0/0:21,0:20:36.09:0,36,1048	0/0:27,0:27:60.17:0,60,1461	0/0:10,0:10:21.05:0,21,488
chr10	88971637	.	GTTTTTGGT	G	3193.41	PASS	AB=0.981;AC=16;AF=0.286;AN=56;BaseQRankSum=-0.358;DP=547;FS=0.468;HRun=0;HaplotypeScore=177.4806;InbreedingCoeff=0.7854;MQ=61.76;MQ0=14;MQRankSum=-2.884;QD=18.46;ReadPosRankSum=-1.731;VQSLOD=2.6504;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:45.73:0,46,782	0/0:11,0:11:27.07:0,27,862	0/0:48,0:21:7.01:0,7,329	0/1:61,0:23:18.59:19,0,231	1/1:8,3:11:29.84:473,30,0	1/1:4,13:19:35.15:750,35,0	1/1:3,5:8:0.52:155,1,0	0/0:36,0:32:87.09:0,87,2098	0/0:19,0:19:48.86:0,49,1184	0/0:24,0:24:69.16:0,69,1848	0/0:15,0:14:39.07:0,39,996	1/1:13,4:17:42.07:725,42,0	0/0:18,0:19:48.12:0,48,1292	1/1:7,4:11:25.31:610,25,0	0/0:20,0:20:33.11:0,33,1125	0/0:5,0:5:12.03:0,12,298	0/0:31,0:31:72.66:0,73,2438	1/1:9,2:11:21.96:435,22,0	0/1:24,0:24:1.76:2,0,509	0/0:14,0:15:14.57:0,15,721	0/0:11,0:11:18.04:0,18,370	1/1:0,7:8:14.99:215,15,0	0/0:9,0:8:21.06:0,21,481	0/0:16,0:16:39.28:0,39,937	0/0:19,0:18:30.54:0,31,1102	0/0:17,0:16:36.09:0,36,1152	0/0:27,0:27:26.65:0,27,1504	0/0:10,0:10:21.06:0,21,548
chr10	88971642	.	TGG	T	1333.21	PASS	AB=0.952;AC=9;AF=0.161;AN=56;BaseQRankSum=4.187;DP=558;FS=2.424;HRun=2;HaplotypeScore=134.4135;InbreedingCoeff=0.0834;MQ=58.63;MQ0=14;MQRankSum=-5.143;QD=8.44;ReadPosRankSum=0.232;VQSLOD=0.4697;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:38.83:0,39,383	0/0:9,0:9:27.08:0,27,377	0/0:49,3:21:15.36:0,15,289	0/1:71,1:28:10.09:10,0,250	0/1:10,2:12:44.42:220,0,44	1/1:17,0:17:10.62:263,11,0	0/1:7,0:7:37.36:53,0,37	0/0:35,0:31:87.65:0,88,1193	0/0:18,0:18:15.14:0,15,355	0/0:24,0:25:73.60:0,74,1015	0/0:16,0:15:41.59:0,42,507	0/1:16,0:16:20.62:393,0,21	0/0:19,0:19:47.71:0,48,509	0/1:10,1:11:18.96:301,0,19	0/0:21,0:21:33.10:0,33,388	0/0:4,0:4:12.04:0,12,149	0/0:33,0:33:70.22:0,70,1244	0/1:10,1:10:33.53:164,0,34	0/0:23,0:22:48.40:0,48,608	0/0:14,0:14:36.07:0,36,378	0/0:12,0:12:18.43:0,18,195	0/1:8,0:8:8.67:73,0,9	0/0:10,0:9:20.89:0,21,226	0/0:15,0:16:38.79:0,39,467	0/0:18,0:17:51.10:0,51,580	0/0:18,0:17:41.96:0,42,474	0/0:27,0:27:78.15:0,78,859	0/0:9,0:9:20.88:0,21,213
chr10	88971644	.	GT	G	833.55	PASS	AB=0.904;AC=19;AF=0.339;AN=56;BaseQRankSum=2.231;DP=564;FS=0.451;HRun=14;HaplotypeScore=129.8163;InbreedingCoeff=0.2317;MQ=59.53;MQ0=17;MQRankSum=-1.486;QD=2.60;ReadPosRankSum=-1.970;VQSLOD=0.3873;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:19:32.22:0,32,163	0/0:9,0:9:23.98:0,24,211	0/1:59,1:25:25.16:25,0,158	0/1:78,3:29:19.62:20,0,85	1/1:10,1:12:21.97:115,22,0	1/1:16,0:17:29.37:132,29,0	0/1:7,0:7:12.54:13,0,25	0/0:31,0:31:58.82:0,59,379	0/0:7,0:18:46.74:0,47,219	0/0:25,0:25:50.95:0,51,452	0/1:14,1:15:12.75:13,0,142	1/1:13,3:16:20.37:109,20,0	0/0:16,0:18:27.23:0,27,143	0/1:11,0:11:5.96:61,0,6	0/0:21,0:21:30.58:0,31,138	0/0:5,0:5:5.60:0,6,26	0/0:29,3:32:36.88:0,37,596	1/1:9,2:10:8.50:98,9,0	0/1:16,5:22:18.20:135,0,18	0/1:9,5:14:27.18:91,0,27	0/0:9,0:10:6.18:0,6,31	1/1:7,1:8:11.65:73,12,0	0/0:8,0:8:2.58:0,3,26	0/0:14,0:15:16.66:0,17,77	0/1:15,3:17:53.44:64,0,53	0/0:18,0:17:23.66:0,24,141	0/1:21,4:25:66.85:67,0,103	0/0:9,0:9:6.23:0,6,44
chr10	88971645	.	T	TTTTTGG	7832.95	PASS	AB=0.997;AC=33;AF=0.589;AN=56;BaseQRankSum=-3.600;DP=568;FS=1.759;HRun=0;HaplotypeScore=147.9025;InbreedingCoeff=0.1536;MQ=59.20;MQ0=17;MQRankSum=-0.785;QD=16.67;ReadPosRankSum=2.095;VQSLOD=4.5780;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:18.52:337,0,19	0/0:9,0:9:27.04:0,27,484	0/1:62,0:25:22.31:22,0,233	0/1:84,0:29:15.56:16,0,135	0/1:12,0:12:52.66:53,0,137	0/1:17,0:17:11.92:12,0,319	0/0:7,0:7:7.03:0,7,99	0/1:36,0:32:79.74:591,0,80	0/1:18,0:18:27.11:485,0,27	0/0:25,0:25:69.18:0,69,1017	0/0:16,0:15:13.33:0,13,366	0/1:15,0:15:26.92:27,0,235	1/1:18,0:18:44.16:637,44,0	0/0:10,0:10:6.65:0,7,235	1/1:21,0:21:33.11:474,33,0	1/1:4,0:4:9.03:126,9,0	0/0:31,0:31:84.84:0,85,1316	0/1:12,0:11:47.06:47,0,132	1/1:21,1:21:6.51:381,7,0	1/1:9,6:15:36.04:779,36,0	1/1:10,0:10:12.02:160,12,0	0/1:8,0:8:25.60:49,0,26	1/1:9,0:8:20.07:284,20,0	1/1:15,0:15:32.07:414,32,0	1/1:12,6:17:42.01:905,42,0	0/1:18,0:17:6.09:466,0,6	1/1:18,7:25:62.97:1257,63,0	1/1:9,0:9:21.07:312,21,0
chr10	88971647	.	T	TTTGG	7156.18	PASS	AB=0.949;AC=23;AF=0.411;AN=56;BaseQRankSum=-7.115;DP=569;FS=1.257;HRun=0;HaplotypeScore=134.6875;InbreedingCoeff=0.3530;MQ=60.72;MQ0=18;MQRankSum=-2.195;QD=27.21;ReadPosRankSum=3.335;VQSLOD=4.8088;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:43.18:201,0,43	0/0:9,0:9:27.09:0,27,472	0/0:64,0:25:53.83:0,54,590	0/0:88,0:30:3.15:0,3,380	0/0:12,0:12:31.68:0,32,271	0/0:17,0:17:34.28:0,34,326	0/1:7,0:7:0.88:1,0,103	0/1:33,0:29:99:472,0,314	0/1:18,0:18:53.14:358,0,53	0/0:25,0:25:71.26:0,71,1153	0/0:15,0:14:35.57:0,36,489	0/0:14,0:14:34.55:0,35,309	1/1:7,10:18:45.15:985,45,0	0/0:10,0:10:26.88:0,27,270	1/1:1,21:22:33.09:791,33,0	1/1:0,4:4:9.03:180,9,0	0/0:31,0:31:85.18:0,85,1454	0/0:12,0:11:29.23:0,29,242	0/1:20,0:19:99:138,0,203	0/1:15,0:15:9.92:354,0,10	1/1:2,9:11:14.78:277,15,0	0/0:8,0:8:15.17:0,15,109	1/1:7,3:9:24.05:427,24,0	1/1:9,5:15:29.60:561,30,0	0/1:18,0:17:11.71:483,0,12	0/1:3,16:18:7.91:778,0,8	0/1:23,0:23:75.91:708,0,76	1/1:5,5:10:21.03:443,21,0
chr10	88971649	.	T	TGG	3524.48	PASS	AB=0.864;AC=21;AF=0.375;AN=56;BaseQRankSum=-1.534;DP=571;FS=0.819;HRun=0;HaplotypeScore=133.2493;InbreedingCoeff=0.0969;MQ=63.09;MQ0=18;MQRankSum=-2.599;QD=13.50;ReadPosRankSum=2.383;VQSLOD=3.7903;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,3:20:99:135,0,122	0/0:9,0:9:27.09:0,27,429	0/0:68,0:28:41.79:0,42,660	0/0:93,0:32:0.87:0,1,452	0/0:12,0:12:33.40:0,33,308	0/0:17,0:17:35.71:0,36,273	0/1:7,1:8:38.52:39,0,76	0/1:17,14:28:99:462,0,479	0/1:14,4:18:66.34:247,0,66	0/0:24,0:24:72.17:0,72,1095	0/0:14,0:13:36.03:0,36,496	0/0:13,0:13:31.95:0,32,279	1/1:13,5:18:32.74:366,33,0	0/0:9,0:9:24.31:0,24,208	1/1:22,0:22:16.17:263,16,0	1/1:4,0:4:2.35:46,2,0	0/0:31,0:31:72.69:0,73,1303	0/0:12,0:11:30.77:0,31,275	0/1:19,0:18:92.74:93,0,330	0/1:13,1:14:66.23:141,0,66	1/1:11,0:11:1.51:106,2,0	0/0:8,0:8:15.47:0,15,154	0/1:9,2:10:1.64:150,0,2	1/1:13,1:14:29.23:337,29,0	0/1:12,3:14:66.34:292,0,66	0/1:19,0:18:59.27:222,0,59	0/1:16,7:23:99:475,0,154	0/1:11,2:13:19.27:151,0,19
chr10	88971725	.	GGTT	G	10832.08	PASS	AB=0.785;AC=44;AF=0.786;AN=56;BaseQRankSum=7.600;DP=565;FS=5.069;HRun=0;HaplotypeScore=120.2277;InbreedingCoeff=0.7872;MQ=73.74;MQ0=10;MQRankSum=-0.216;QD=28.73;ReadPosRankSum=2.022;VQSLOD=5.1955;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,10:17:22.63:310,23,0	0/0:4,0:4:9.03:0,9,185	0/0:65,0:32:23.42:0,23,462	0/0:72,0:43:9.68:0,10,712	1/1:4,22:26:63.17:887,63,0	1/1:1,12:13:36.12:524,36,0	1/1:1,12:13:24.08:349,24,0	1/1:10,13:22:33.07:421,33,0	1/1:3,11:14:33.11:480,33,0	0/1:14,1:15:4.58:5,0,626	0/0:13,0:13:33.04:0,33,597	1/1:0,10:10:27.09:393,27,0	1/1:1,20:21:48.16:698,48,0	1/1:2,11:13:36.12:524,36,0	1/1:4,6:10:21.07:300,21,0	1/1:1,12:13:39.13:562,39,0	0/0:33,0:33:87.08:0,87,1723	1/1:3,11:14:30.10:431,30,0	1/1:8,6:14:18.06:262,18,0	1/1:5,20:25:54.18:770,54,0	1/1:4,7:11:24.04:325,24,0	1/1:0,10:10:24.08:349,24,0	1/1:2,20:22:35.11:514,35,0	1/1:0,8:8:17.98:262,18,0	1/1:3,12:15:24.08:347,24,0	0/1:8,11:18:84.27:441,0,84	1/1:1,24:26:59.91:850,60,0	1/1:0,25:25:57.19:829,57,0
chr10	88971852	.	AC	A	10616.36	PASS	AB=0.525;AC=29;AF=0.518;AN=56;BaseQRankSum=-7.272;DP=629;FS=9.036;HRun=2;HaplotypeScore=78.4350;InbreedingCoeff=0.9284;MQ=81.15;MQ0=0;MQRankSum=-3.776;QD=35.27;ReadPosRankSum=2.683;VQSLOD=5.1331;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:50.43:0,50,344	0/0:15,0:15:45.15:0,45,672	0/0:19,0:19:57.18:0,57,799	0/0:16,0:16:48.15:0,48,659	1/1:0,16:16:48.05:584,48,0	1/1:2,20:22:57.18:740,57,0	1/1:0,23:23:60.20:779,60,0	0/0:33,0:33:85.02:0,85,500	0/0:20,0:20:31.57:0,32,342	0/0:35,0:35:99:0,105,1553	0/0:21,0:21:57.19:0,57,854	1/1:0,23:23:66.21:856,66,0	1/1:0,30:30:75.24:973,75,0	1/1:1,21:22:54.18:701,54,0	1/1:0,22:22:63.20:813,63,0	1/1:0,21:21:63.20:817,63,0	0/0:33,0:33:93.31:0,93,1392	1/1:0,17:17:51.17:660,51,0	0/0:16,0:16:39.91:0,40,245	0/0:34,0:34:96.51:0,97,654	1/1:0,15:15:45.15:584,45,0	1/1:0,21:21:63.16:798,63,0	1/1:0,25:25:69.06:894,69,0	1/1:0,10:10:30.10:389,30,0	0/0:40,0:40:99:0,109,727	0/1:2,19:21:26.71:677,0,27	0/0:27,0:27:80.16:0,80,562	1/1:0,13:13:27.09:350,27,0
chr10	88972095	.	T	TTC	2502.06	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-10.099;DP=809;FS=0.000;HRun=0;HaplotypeScore=106.2265;InbreedingCoeff=0.9217;MQ=73.48;MQ0=0;MQRankSum=-0.058;QD=37.34;ReadPosRankSum=3.554;VQSLOD=5.9062;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,36:40:90.31:1485,90,0	0/0:6,0:6:12.04:0,12,149	0/0:45,0:39:69.71:0,70,871	0/0:45,0:39:69.09:0,69,787	0/0:17,0:17:42.12:0,42,511	0/0:30,0:30:75.24:0,75,937	0/0:31,0:31:72.16:0,72,847	0/0:33,0:33:75.24:0,75,938	1/1:4,23:27:69.24:1138,69,0	0/0:30,0:30:75.19:0,75,909	0/0:25,0:25:60.19:0,60,750	0/0:26,0:26:60.17:0,60,736	0/0:35,0:35:96.26:0,96,1160	0/0:20,0:20:48.13:0,48,578	0/0:31,0:32:84.07:0,84,1001	0/0:27,0:27:75.24:0,75,938	0/0:30,0:30:78.23:0,78,962	0/0:23,0:23:48.13:0,48,596	0/0:12,0:12:5.07:0,5,209	0/0:32,0:32:81.25:0,81,1000	0/0:34,0:34:96.29:0,96,1187	0/0:36,0:36:81.26:0,81,1013	0/0:25,0:25:63.20:0,63,787	0/0:28,0:28:51.26:0,51,862	0/0:35,0:35:84.25:0,84,1036	0/0:40,0:40:99:0,99,1226	0/0:37,0:36:99:0,105,1248	0/0:6,0:6:18.06:0,18,225
chr10	88973323	.	T	TA	3468.28	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-13.275;DP=778;FS=1.871;HRun=5;HaplotypeScore=72.1231;InbreedingCoeff=0.9985;MQ=91.15;MQ0=0;MQRankSum=-7.897;QD=35.76;ReadPosRankSum=2.642;VQSLOD=3.7776;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,54:59:99:2087,160,0	0/0:9,0:9:24.04:0,24,247	0/0:34,0:34:96.24:0,96,1030	0/0:28,0:28:77.55:0,78,809	0/0:32,0:32:84.19:0,84,893	0/0:25,0:25:66.16:0,66,709	0/0:30,0:30:84.21:0,84,903	0/0:33,0:33:78.17:0,78,825	1/1:1,37:38:99:1381,105,0	0/0:35,0:35:99:0,102,1085	0/0:15,0:15:39.10:0,39,419	0/0:29,0:29:87.20:0,87,927	0/0:27,0:27:78.20:0,78,838	0/0:31,0:31:87.22:0,87,934	0/0:29,0:29:81.20:0,81,871	0/0:33,0:33:96.19:0,96,1007	0/0:39,0:39:99:0,111,1193	0/0:26,0:26:72.18:0,72,774	0/0:17,0:17:48.07:0,48,491	0/0:10,0:10:30.08:0,30,322	0/0:30,0:30:78.15:0,78,820	0/0:20,0:20:60.12:0,60,628	0/0:32,0:32:87.21:0,87,935	0/0:27,0:27:75.17:0,75,797	0/0:26,0:26:69.17:0,69,742	0/0:27,0:27:78.19:0,78,832	0/0:26,0:26:75.19:0,75,805	0/0:11,0:11:33.08:0,33,355
chr10	88974283	.	G	GTTTC	6910.88	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-9.433;DP=702;FS=0.895;HRun=0;HaplotypeScore=116.3788;InbreedingCoeff=0.9922;MQ=55.49;MQ0=1;MQRankSum=-4.056;QD=76.79;ReadPosRankSum=-0.152;VQSLOD=6.5062;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,2046	0/0:16,0:16:45.15:0,45,944	0/0:14,0:10:30.10:0,30,613	0/0:13,0:10:23.91:0,24,360	0/0:31,0:31:90.31:0,90,1877	0/0:29,0:29:78.27:0,78,1628	0/0:35,0:35:99:0,105,2135	1/1:0,2:4:12.04:276,12,0	0/0:25,0:25:66.23:0,66,1359	0/0:28,0:28:81.28:0,81,1692	0/0:18,0:18:51.18:0,51,1064	0/0:31,0:31:84.29:0,84,1742	0/0:32,0:32:96.29:0,96,1962	0/0:36,0:36:99:0,102,2128	0/0:42,0:42:99:0,123,2523	0/0:16,0:16:48.16:0,48,992	0/0:31,0:31:81.28:0,81,1693	0/0:21,0:21:60.21:0,60,1255	1/1:1,12:14:39.13:1080,39,0	1/1:4,22:26:78.27:2208,78,0	0/0:34,0:34:99:0,102,2139	0/0:26,0:26:78.27:0,78,1618	0/0:22,0:22:60.21:0,60,1258	0/0:23,0:23:66.23:0,66,1351	1/1:1,22:25:60.21:1701,60,0	0/0:35,0:35:99:0,105,2151	1/1:1,19:20:57.20:1646,57,0	0/0:19,0:19:54.19:0,54,1133
chr10	88976462	.	A	AT	10840.63	PASS	AB=0.944;AC=35;AF=0.625;AN=56;BaseQRankSum=-12.195;DP=701;FS=6.942;HRun=10;HaplotypeScore=75.2770;InbreedingCoeff=0.8190;MQ=74.74;MQ0=1;MQRankSum=0.161;QD=22.73;ReadPosRankSum=1.603;VQSLOD=5.7267;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:30:87.22:928,87,0	0/1:9,1:10:5.02:5,0,170	0/0:14,0:15:16.53:0,17,113	0/1:11,0:12:9.66:10,0,43	1/1:5,27:33:71.73:708,72,0	1/1:3,21:24:60.15:640,60,0	1/1:1,27:29:78.02:808,78,0	0/0:34,0:34:77.85:0,78,635	1/1:7,21:28:38.51:615,39,0	0/0:24,0:24:62.90:0,63,517	0/0:26,0:26:65.90:0,66,542	1/1:2,26:28:75.16:790,75,0	1/1:5,31:35:56.56:807,57,0	1/1:2,17:19:45.11:480,45,0	1/1:1,25:25:69.04:736,69,0	1/1:1,32:33:81.20:858,81,0	0/0:21,1:23:29.83:0,30,431	1/1:5,22:27:35.51:583,36,0	0/1:22,2:24:3.57:4,0,383	0/0:35,0:36:94.89:0,95,765	0/0:8,0:8:23.97:0,24,197	1/1:3,26:29:84.19:881,84,0	1/1:4,17:21:17.46:391,17,0	1/1:3,13:16:39.10:416,39,0	0/0:29,0:29:80.86:0,81,661	1/1:6,26:32:28.89:703,29,0	0/0:28,0:29:85.93:0,86,695	1/1:3,16:19:45.11:480,45,0
chr10	88977770	.	T	TATGG	4120.92	PASS	AB=0.997;AC=18;AF=0.321;AN=56;BaseQRankSum=-12.570;DP=862;FS=8.639;HRun=0;HaplotypeScore=224.7944;InbreedingCoeff=0.2920;MQ=72.38;MQ0=5;MQRankSum=1.215;QD=9.91;ReadPosRankSum=3.181;VQSLOD=1.9629;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:53,0:53:35.40:569,35,0	1/1:3,8:11:18.06:434,18,0	0/0:39,0:33:23.91:0,24,287	0/0:30,0:23:3.39:0,3,244	0/1:32,0:32:25.88:26,0,347	0/1:22,0:22:42.04:42,0,219	0/0:34,0:33:4.83:0,5,238	0/0:31,0:31:48.12:0,48,643	0/0:35,0:35:4.12:0,4,546	1/1:21,7:29:24.05:489,24,0	1/1:7,10:18:24.05:545,24,0	0/0:28,0:28:6.94:0,7,246	0/1:46,0:46:20.98:21,0,524	0/0:32,0:32:12.10:0,12,473	0/1:41,0:41:0.39:0,0,579	0/0:37,0:37:17.17:0,17,607	1/1:15,29:45:69.24:1667,69,0	0/0:36,0:36:5.89:0,6,502	0/0:25,0:25:36.06:0,36,488	0/0:20,0:20:26.39:0,26,390	0/1:45,0:44:99:102,0,355	0/1:24,0:24:37.96:38,0,314	0/0:26,0:26:23.57:0,24,246	0/0:25,0:25:26.28:0,26,266	0/0:21,0:21:36.12:0,36,571	0/1:35,1:36:89.94:90,0,343	0/0:26,0:26:60.17:0,60,887	0/1:13,0:13:95.90:96,0,120
chr10	88977821	.	CGG	C	9885.14	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=6.928;DP=773;FS=4.080;HRun=2;HaplotypeScore=192.7568;InbreedingCoeff=0.9997;MQ=67.55;MQ0=1;MQRankSum=-2.839;QD=39.86;ReadPosRankSum=5.488;VQSLOD=4.8188;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:44:99:0,99,1943	0/0:12,0:12:33.11:0,33,670	0/0:41,0:40:99:0,120,2309	0/0:35,0:35:99:0,99,1857	0/0:21,0:21:60.16:0,60,1178	0/0:17,0:17:51.17:0,51,991	0/0:34,0:33:96.33:0,96,1941	0/0:24,0:24:72.25:0,72,1338	0/0:34,0:34:99:0,102,2053	0/0:19,0:19:54.19:0,54,1095	0/0:18,0:18:48.16:0,48,939	0/0:23,0:23:69.22:0,69,1365	1/1:0,50:50:99:2051,126,0	0/0:33,0:33:93.32:0,93,1884	1/1:0,37:37:99:1650,102,0	1/1:0,36:36:96.33:1565,96,0	0/0:35,0:35:96.26:0,96,1852	0/0:35,0:35:99:0,102,1956	0/0:16,0:15:45.15:0,45,838	0/0:14,0:14:33.04:0,33,598	1/1:1,41:41:86.88:1419,87,0	0/0:29,0:29:87.30:0,87,1756	1/1:0,15:15:30.06:489,30,0	1/1:2,29:31:65.93:1077,66,0	0/0:23,0:23:69.18:0,69,1251	1/1:0,25:25:75.24:1194,75,0	0/0:18,0:18:51.12:0,51,929	1/1:0,12:12:27.09:440,27,0
chr10	88977972	.	AACAC	A	1852.73	PASS	AB=0.842;AC=30;AF=0.556;AN=54;BaseQRankSum=7.782;DP=518;FS=2.948;HRun=0;HaplotypeScore=113.0605;InbreedingCoeff=0.4846;MQ=65.00;MQ0=10;MQRankSum=-7.455;QD=5.08;ReadPosRankSum=1.658;VQSLOD=2.2752;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:19:49.59:72,0,50	0/0:11,0:11:18.04:0,18,347	0/0:22,0:15:2.97:0,3,20	./.	0/0:9,0:9:9.03:0,9,196	0/1:10,0:14:4.43:4,0,290	0/0:23,0:23:27.71:0,28,510	1/1:23,0:21:5.83:42,6,0	0/1:5,2:16:22.87:79,0,23	0/1:24,0:24:5.24:5,0,325	0/0:11,0:12:23.80:0,24,432	0/0:10,0:10:18.03:0,18,300	1/1:23,0:23:29.80:278,30,0	0/0:10,0:11:11.78:0,12,177	1/1:36,0:36:41.90:372,42,0	1/1:29,0:29:30.03:279,30,0	0/1:25,1:28:8.43:8,0,638	0/0:12,0:14:20.27:0,20,287	0/1:10,3:14:3.48:63,0,3	1/1:8,7:16:12.03:168,12,0	1/1:21,0:21:8.84:83,9,0	0/0:14,0:14:18.03:0,18,313	1/1:18,0:18:9.48:84,9,0	1/1:18,0:18:6:56,6,0	1/1:11,6:17:12.51:189,13,0	1/1:21,0:21:12.01:111,12,0	1/1:11,4:16:7.32:119,7,0	1/1:11,0:11:3:28,3,0
chr10	88978005	.	ACACACACACC	A	4991.36	PASS	AB=0.766;AC=16;AF=0.286;AN=56;BaseQRankSum=8.369;DP=544;FS=4.591;HRun=0;HaplotypeScore=151.8418;InbreedingCoeff=0.7896;MQ=60.58;MQ0=13;MQRankSum=-7.087;QD=26.98;ReadPosRankSum=4.682;VQSLOD=3.8637;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:32.02:0,32,732	0/0:14,0:14:38.57:0,39,1062	0/0:21,0:12:29.22:0,29,386	0/0:35,0:22:48.97:0,49,650	0/0:14,0:14:36.07:0,36,869	0/1:13,0:13:33.58:34,0,975	0/0:24,0:23:55.80:0,56,1513	0/0:20,0:18:50.37:0,50,616	0/0:24,0:23:48.74:0,49,1013	0/0:22,0:22:66.11:0,66,1783	0/0:15,0:15:34.34:0,34,1203	0/0:18,0:18:50.78:0,51,1350	1/1:4,26:30:32:1005,32,0	0/0:21,0:20:51:0,51,1277	1/1:8,24:31:45.15:1311,45,0	1/1:2,28:30:33.04:1008,33,0	0/0:25,0:25:69.14:0,69,2304	0/0:16,0:16:44.99:0,45,1214	0/0:9,0:9:22.80:0,23,377	0/0:15,0:15:26.95:0,27,376	1/1:3,16:19:8.34:301,8,0	0/0:14,0:14:27.07:0,27,940	1/1:2,13:15:18.44:381,18,0	1/1:2,17:19:9.03:239,9,0	0/0:12,0:12:26.38:0,26,404	0/1:2,15:17:21.78:575,0,22	0/0:18,0:17:44.93:0,45,665	1/1:10,0:9:9.03:138,9,0
chr10	88978007	.	ACACACACC	A	3458.78	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=11.325;DP=525;FS=5.461;HRun=0;HaplotypeScore=135.4885;InbreedingCoeff=0.8569;MQ=62.34;MQ0=13;MQRankSum=-7.375;QD=20.71;ReadPosRankSum=5.047;VQSLOD=2.1967;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:32.60:0,33,575	0/0:13,0:13:38.57:0,39,854	0/0:21,0:13:32.23:0,32,406	0/0:34,0:21:51.59:0,52,606	0/0:14,0:14:36.05:0,36,689	0/0:15,0:15:5.92:0,6,795	0/0:24,0:23:52.43:0,52,1234	0/0:20,0:18:45.97:0,46,442	0/0:25,0:24:51.31:0,51,769	0/0:22,0:22:60.03:0,60,1389	0/0:15,0:15:37.34:0,37,988	0/0:18,0:18:50.78:0,51,1136	1/1:27,0:27:32.96:690,33,0	0/0:21,0:20:50.97:0,51,944	1/1:29,1:29:45.10:960,45,0	1/1:29,0:29:32.90:693,33,0	0/0:25,0:25:69.11:0,69,1845	0/0:15,0:16:38.97:0,39,934	0/0:9,0:9:22.23:0,22,262	0/0:15,0:15:17.29:0,17,204	1/1:17,0:17:8.94:201,9,0	0/0:11,0:11:27.07:0,27,762	1/1:13,0:13:12.44:221,12,0	1/1:17,0:17:8.96:152,9,0	0/1:10,0:10:2.76:3,0,227	1/1:16,0:16:2.52:421,3,0	0/0:18,0:17:37.38:0,37,412	1/1:3,5:7:8.75:117,9,0
chr10	88978741	.	T	TG	12946.10	PASS	AB=0.983;AC=44;AF=0.786;AN=56;BaseQRankSum=1.527;DP=670;FS=0.755;HRun=4;HaplotypeScore=99.9834;InbreedingCoeff=0.8156;MQ=81.18;MQ0=1;MQRankSum=-3.381;QD=24.20;ReadPosRankSum=4.331;VQSLOD=3.4756;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:99:1382,99,0	0/0:12,0:12:30.07:0,30,344	0/0:27,0:26:30.70:0,31,475	0/1:25,0:21:4.75:5,0,220	1/1:3,22:25:65.60:835,66,0	1/1:2,24:26:57.18:780,57,0	1/1:1,16:17:18.06:248,18,0	1/1:30,0:30:82.91:686,83,0	1/1:0,17:17:45.15:628,45,0	0/0:40,0:40:90.27:0,90,1174	0/0:27,0:27:49.90:0,50,701	1/1:1,18:19:45.15:626,45,0	1/1:33,0:33:65.04:593,65,0	1/1:0,15:15:36.12:503,36,0	1/1:29,0:29:69.03:627,69,0	1/1:29,2:31:71.83:678,72,0	0/0:29,0:29:87.20:0,87,990	1/1:1,15:16:33.11:460,33,0	1/1:23,0:23:66.71:576,67,0	1/1:18,0:18:50.68:426,51,0	1/1:16,0:16:27.01:245,27,0	1/1:2,23:25:63.21:863,63,0	1/1:22,0:23:56.91:506,57,0	1/1:18,2:20:51.05:500,51,0	1/1:21,1:22:50.73:477,51,0	0/1:28,0:29:25.05:529,0,25	1/1:20,1:21:48.03:448,48,0	1/1:16,0:16:36.02:326,36,0
chr10	88978744	.	G	GGT	16411.44	PASS	AB=0.747;AC=44;AF=0.786;AN=56;BaseQRankSum=0.871;DP=681;FS=2.504;HRun=0;HaplotypeScore=101.7797;InbreedingCoeff=0.7437;MQ=80.58;MQ0=1;MQRankSum=-2.048;QD=29.89;ReadPosRankSum=5.641;VQSLOD=6.4937;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:41:64.08:485,64,0	0/0:10,0:10:30.10:0,30,461	0/0:26,0:25:47.43:0,47,646	0/1:24,1:21:45.65:46,0,330	1/1:24,0:24:58.03:366,58,0	1/1:24,1:25:36.32:325,36,0	1/1:18,0:18:1.39:91,1,0	1/1:2,27:31:87.14:1347,87,0	1/1:18,0:18:46.49:258,46,0	0/0:38,0:38:90.32:0,90,1523	0/0:26,0:28:76.06:0,76,1002	1/1:20,0:20:24.01:213,24,0	1/1:1,28:33:58.68:1275,59,0	1/1:16,0:16:15.41:168,15,0	1/1:0,29:32:69.24:1371,69,0	1/1:2,29:34:71.06:1301,71,0	0/0:30,0:30:90.20:0,90,1312	1/1:16,0:16:15.09:154,15,0	1/1:0,24:24:72.08:1300,72,0	1/1:1,17:19:51.11:924,51,0	1/1:0,13:14:27.09:544,27,0	1/1:25,0:25:54.99:310,55,0	1/1:1,22:24:57.20:1129,57,0	1/1:2,16:18:50.96:937,51,0	1/1:1,21:22:50.72:982,51,0	0/1:4,25:32:51.69:1243,0,52	1/1:1,20:22:48.06:919,48,0	1/1:0,15:16:36.12:724,36,0
chr10	88980014	.	TA	T	5970.46	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=7.566;DP=593;FS=6.733;HRun=11;HaplotypeScore=77.5849;InbreedingCoeff=0.6885;MQ=71.56;MQ0=4;MQRankSum=0.689;QD=12.62;ReadPosRankSum=1.913;VQSLOD=4.7589;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:0.46:4,0,0	0/0:10,0:10:27.06:0,27,281	0/0:16,0:11:8.63:0,9,46	0/0:12,0:12:3.59:0,4,94	1/1:24,0:23:4.24:18,4,0	1/1:24,0:24:0.53:5,1,0	1/1:11,0:11:0.46:3,0,0	1/1:4,31:35:89.17:708,89,0	0/1:14,0:14:0.16:0,0,21	0/0:22,0:22:51.12:0,51,539	0/0:22,0:22:54.10:0,54,553	1/1:18,0:18:2.49:9,2,0	1/1:4,15:19:33.12:355,33,0	1/1:17,0:17:0.46:4,0,0	1/1:4,23:27:65.92:542,66,0	1/1:2,19:21:47.94:394,48,0	0/0:36,1:37:74.58:0,75,982	1/1:13,0:13:0.88:5,1,0	1/1:7,19:26:56.84:455,57,0	1/1:7,23:30:65.86:536,66,0	1/1:2,12:14:29.96:246,30,0	0/1:9,0:9:0.02:2,0,0	1/1:6,36:42:95.86:788,96,0	1/1:2,16:18:32.96:271,33,0	1/1:5,14:19:38.94:320,39,0	1/1:4,24:28:68.88:562,69,0	1/1:7,22:30:55.62:449,56,0	1/1:2,13:15:35.94:296,36,0
chr10	88980024	.	AAC	A	4155.52	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-5.214;DP=562;FS=2.913;HRun=0;HaplotypeScore=92.3438;InbreedingCoeff=0.9756;MQ=70.81;MQ0=5;MQRankSum=0.047;QD=29.26;ReadPosRankSum=3.193;VQSLOD=5.5359;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:27.09:376,27,0	0/0:10,0:10:30.09:0,30,515	0/0:14,0:9:14.23:0,14,242	0/0:16,0:14:8.80:0,9,207	1/1:2,26:26:69.01:836,69,0	1/1:1,19:20:44.39:626,44,0	1/1:0,9:9:21.07:293,21,0	0/0:33,0:33:76.78:0,77,581	1/1:1,15:16:9.08:394,9,0	0/0:23,0:23:69.17:0,69,1088	0/0:20,0:20:59.94:0,60,1036	1/1:0,18:18:39.13:543,39,0	0/0:18,0:18:52.73:0,53,321	1/1:0,15:15:39.13:544,39,0	0/0:27,0:27:76.32:0,76,475	0/0:22,0:22:55.75:0,56,347	0/0:36,0:36:99:0,108,1840	1/1:0,11:11:21.07:293,21,0	0/0:24,0:24:70.65:0,71,467	0/0:27,0:27:73.12:0,73,442	0/0:15,0:15:38.10:0,38,239	1/1:0,10:10:18.04:251,18,0	0/0:39,0:39:99:0,108,670	0/0:17,0:17:34.06:0,34,201	0/0:15,0:15:40.87:0,41,242	0/0:26,0:26:73.29:0,73,452	0/0:25,0:25:48.36:0,48,343	0/0:13,0:13:35.09:0,35,206
chr10	88981597	.	AAT	A	328.21	PASS	AB=0.629;AC=14;AF=0.350;AN=40;BaseQRankSum=3.041;DP=413;FS=0.990;HRun=0;HaplotypeScore=94.5622;InbreedingCoeff=0.5813;MQ=96.56;MQ0=16;MQRankSum=-1.311;QD=4.62;ReadPosRankSum=1.891;VQSLOD=2.6892;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,1:25:5.20:28,0,5	0/0:2,0:2:5.81:0,6,62	0/0:83,0:33:4.03:0,4,75	0/0:122,1:62:34.01:0,34,290	0/1:0,9:9:0:0,0,0	1/1:2,16:18:12.03:125,12,0	1/1:1,2:3:6.02:68,6,0	0/0:51,0:51:99:0,104,1138	1/1:3,0:3:2.50:9,2,0	0/0:5,0:5:12.04:0,12,177	0/0:3,0:3:3.01:0,3,50	1/1:3,1:4:6.01:62,6,0	./.	./.	./.	./.	0/0:13,0:13:29.74:0,30,381	1/1:1,5:6:9.02:97,9,0	0/0:17,0:16:22.16:0,22,240	0/0:3,0:3:5.49:0,5,34	./.	1/1:3,0:3:6.02:75,6,0	./.	./.	0/0:14,0:13:9.03:0,9,139	./.	0/0:5,0:5:0:0,0,0	0/0:4,0:5:6.02:0,6,89
chr10	88981613	.	CATATATAT	C	4165.68	PASS	AB=1.000;AC=25;AF=0.568;AN=44;BaseQRankSum=-0.002;DP=386;FS=0.731;HRun=0;HaplotypeScore=113.6872;InbreedingCoeff=0.6312;MQ=89.20;MQ0=20;MQRankSum=-3.517;QD=27.05;ReadPosRankSum=0.983;VQSLOD=3.4283;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,8:22:35.20:467,35,0	0/0:1,0:2:6.02:0,6,194	0/0:89,0:30:9.23:0,9,127	0/0:110,0:50:4.39:0,4,186	1/1:6,5:11:14.46:194,14,0	1/1:5,13:18:45.14:704,45,0	1/1:1,2:3:6.02:107,6,0	1/1:20,27:47:77.15:1491,77,0	0/1:3,0:3:9.74:56,0,10	0/0:5,0:5:12.04:0,12,356	0/0:2,0:2:6.01:0,6,143	1/1:5,1:6:12.02:159,12,0	./.	1/1:2,3:5:6.02:68,6,0	./.	./.	0/0:10,0:15:42.12:0,42,1077	1/1:3,4:7:18.06:362,18,0	1/1:6,10:15:23.14:453,23,0	0/0:1,0:1:2.97:0,3,20	1/1:1,0:1:0.47:1,0,0	./.	./.	./.	1/1:3,4:6:6.02:70,6,0	0/0:1,0:1:3.01:0,3,53	1/1:1,7:8:2.91:34,3,0	0/0:3,0:3:6.02:0,6,222
chr10	88983401	.	G	GT	2331.53	PASS	AC=42;AF=1.000;AN=42;DP=102;FS=0.000;HRun=0;HaplotypeScore=20.1177;InbreedingCoeff=0.0234;MQ=26.33;MQ0=1;QD=24.29;VQSLOD=4.5673;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:3.01:48,3,0	1/1:0,2:2:6.02:96,6,0	./.	./.	1/1:0,6:5:0.47:1,0,0	1/1:0,7:7:6.02:95,6,0	1/1:0,7:7:12.04:191,12,0	1/1:0,7:6:18.06:287,18,0	1/1:0,2:2:3.01:48,3,0	1/1:0,3:3:9.03:143,9,0	1/1:0,3:3:3.01:47,3,0	1/1:0,4:4:12.04:191,12,0	1/1:0,5:5:6.02:95,6,0	1/1:0,8:8:12.04:191,12,0	1/1:0,6:6:6.02:95,6,0	./.	1/1:0,2:3:6.02:95,6,0	./.	1/1:1,4:4:11.97:162,12,0	1/1:0,5:5:3.01:48,3,0	./.	1/1:0,3:3:3.01:48,3,0	1/1:0,2:2:6.02:96,6,0	./.	1/1:0,5:4:3.01:48,3,0	1/1:1,6:7:18.06:287,18,0	1/1:0,3:3:6.02:96,6,0	./.
chr10	88983479	.	T	TC	2810.50	PASS	AC=46;AF=0.958;AN=48;BaseQRankSum=1.621;DP=89;FS=4.702;HRun=1;HaplotypeScore=58.9410;InbreedingCoeff=0.1226;MQ=38.02;MQ0=0;MQRankSum=-1.732;QD=33.06;ReadPosRankSum=0.503;VQSLOD=3.1974;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:3:6.02:94,6,0	1/1:2,1:3:3.01:48,3,0	./.	0/0:1,0:1:3:0,3,26	1/1:2,6:6:15.05:237,15,0	./.	1/1:0,2:1:3.01:48,3,0	1/1:0,2:1:3.01:48,3,0	1/1:0,2:2:6.02:95,6,0	1/1:1,3:4:9.03:144,9,0	1/1:0,3:3:6.02:93,6,0	1/1:0,1:1:3.01:48,3,0	1/1:0,5:5:12.04:191,12,0	1/1:2,1:3:3.01:48,3,0	./.	./.	1/1:1,1:2:3.01:48,3,0	1/1:1,2:3:6.02:96,6,0	1/1:0,2:2:6.02:96,6,0	1/1:1,9:7:18.06:286,18,0	1/1:0,2:2:6.02:94,6,0	1/1:0,6:5:15.05:236,15,0	1/1:0,5:4:12.04:189,12,0	1/1:0,2:1:3.01:48,3,0	1/1:0,5:5:15.05:238,15,0	1/1:0,3:3:9.03:144,9,0	1/1:0,3:3:9.03:144,9,0	1/1:0,5:4:12.04:191,12,0
chr10	88983599	.	GACC	G	4909.58	PASS	AB=0.979;AC=38;AF=0.679;AN=56;BaseQRankSum=3.284;DP=405;FS=18.336;HRun=0;HaplotypeScore=112.6793;InbreedingCoeff=0.5118;MQ=69.33;MQ0=0;MQRankSum=-4.514;QD=14.66;ReadPosRankSum=8.006;VQSLOD=2.8710;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:17,1:16:2.23:214,0,2	0/0:2,0:2:2.96:0,3,19	0/0:19,0:16:35.14:0,35,474	0/0:18,0:17:37.41:0,37,469	1/1:10,0:10:20.59:141,21,0	1/1:11,1:12:35.37:249,35,0	1/1:25,0:24:35.79:320,36,0	0/1:9,0:8:30.51:56,0,31	1/1:13,0:13:16.64:206,17,0	0/0:11,0:11:23.94:0,24,340	0/0:7,0:7:15.05:0,15,297	1/1:14,0:13:38.18:256,38,0	1/1:17,0:16:38.41:261,38,0	1/1:21,0:21:37.26:353,37,0	1/1:18,0:18:50.56:362,51,0	1/1:16,0:15:44.31:298,44,0	0/0:12,0:12:33.08:0,33,653	1/1:24,0:24:60.87:361,61,0	0/1:14,0:14:9.89:144,0,10	1/1:12,2:12:32.07:230,32,0	0/1:22,0:22:7.95:249,0,8	1/1:11,1:12:12.59:223,13,0	0/1:10,0:9:9.24:119,0,9	1/1:17,0:17:26.77:253,27,0	1/1:16,0:15:19.37:197,19,0	0/1:12,1:12:31.27:104,0,31	1/1:14,0:14:32.53:227,33,0	1/1:6,0:5:14.61:87,15,0
chr10	88983600	.	ACCC	A	10522.05	PASS	AB=0.542;AC=43;AF=0.796;AN=54;BaseQRankSum=-1.970;DP=399;FS=25.155;HRun=11;HaplotypeScore=92.4020;InbreedingCoeff=0.8636;MQ=69.65;MQ0=0;MQRankSum=-6.331;QD=31.79;ReadPosRankSum=4.717;VQSLOD=2.2418;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:16:33.08:433,33,0	./.	0/0:17,0:16:32.85:0,33,303	0/0:13,0:16:29.85:0,30,245	1/1:0,10:10:21.07:276,21,0	1/1:1,11:12:36.12:473,36,0	1/1:2,22:23:54.16:710,54,0	1/1:2,6:7:18.05:222,18,0	1/1:1,12:13:33.10:434,33,0	0/0:11,0:11:9.03:0,9,174	0/0:6,0:7:15.03:0,15,265	1/1:0,14:13:39.13:512,39,0	1/1:0,17:16:39.13:513,39,0	1/1:1,20:21:54.16:709,54,0	1/1:0,18:18:51.17:670,51,0	1/1:0,16:15:45.15:591,45,0	0/0:10,0:12:30.08:0,30,547	1/1:0,24:24:63.20:828,63,0	1/1:3,11:14:33.07:404,33,0	1/1:3,11:12:33.11:431,33,0	1/1:3,18:21:48.14:630,48,0	1/1:2,10:12:30.09:390,30,0	1/1:2,8:9:21.06:275,21,0	1/1:0,17:17:45.14:591,45,0	1/1:2,13:14:33.10:433,33,0	0/1:2,11:12:16.28:346,0,16	1/1:1,13:14:36.08:454,36,0	1/1:0,6:5:15.05:197,15,0
chr10	88984134	.	GA	G	2969.43	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=9.723;DP=562;FS=0.000;HRun=14;HaplotypeScore=122.9044;InbreedingCoeff=0.8546;MQ=69.94;MQ0=0;MQRankSum=-3.621;QD=6.28;ReadPosRankSum=2.959;VQSLOD=2.4552;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:27:32.56:94,33,0	0/0:10,1:11:6.29:0,6,189	0/1:23,0:18:2.33:2,0,61	0/0:9,0:8:5.96:0,6,46	1/1:3,0:16:21.44:60,21,0	1/1:2,0:10:14.25:41,14,0	1/1:4,0:24:26.46:76,26,0	1/1:5,0:29:42.69:125,43,0	1/1:5,0:20:30.06:87,30,0	0/0:19,0:19:35.98:0,36,317	0/0:16,1:23:14.24:0,14,264	1/1:3,0:8:16.30:47,16,0	1/1:7,19:28:40.02:343,40,0	1/1:5,0:16:20.36:58,20,0	1/1:2,12:15:31.78:211,32,0	1/1:3,12:15:35.67:247,36,0	0/0:26,0:27:60.04:0,60,548	1/1:5,0:13:10.18:29,10,0	1/1:5,0:22:36.69:111,37,0	1/1:4,0:22:34.61:101,35,0	1/1:5,11:16:17.79:201,18,0	1/1:4,0:13:18.32:52,18,0	1/1:3,10:14:28.80:191,29,0	1/1:6,23:29:65.92:453,66,0	1/1:2,0:22:32.58:95,33,0	1/1:6,18:24:36.30:347,36,0	1/1:4,0:22:28.49:84,28,0	1/1:1,4:6:13.94:88,14,0
chr10	88984377	.	T	TC	3056.20	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-5.616;DP=599;FS=20.211;HRun=1;HaplotypeScore=100.1320;InbreedingCoeff=0.8489;MQ=79.58;MQ0=0;MQRankSum=2.098;QD=26.81;ReadPosRankSum=-0.522;VQSLOD=2.1128;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:26.84:0,27,202	0/0:7,0:7:18.06:0,18,231	0/0:25,0:25:39.43:0,39,510	0/0:20,0:21:26.72:0,27,303	0/0:23,0:23:50.83:0,51,396	0/0:24,0:24:68.82:0,69,543	0/0:28,0:28:80.71:0,81,628	0/1:23,0:23:11.67:12,0,119	0/0:37,0:37:99:0,101,765	0/0:22,0:22:62.96:0,63,737	0/0:22,0:22:40.55:0,41,519	0/0:21,0:21:56.84:0,57,448	0/0:23,0:23:54.20:0,54,695	0/0:20,0:20:50.88:0,51,406	0/0:23,0:23:53.47:0,53,665	0/0:20,0:20:54.13:0,54,632	0/0:29,0:29:69.84:0,70,820	0/0:22,0:22:65.78:0,66,512	1/1:1,17:18:54.12:706,54,0	1/1:2,13:15:36.49:471,36,0	0/0:16,0:16:42.07:0,42,470	0/0:21,0:21:56.52:0,57,426	0/0:13,0:13:39.11:0,39,485	0/0:30,0:30:74.91:0,75,826	1/1:1,16:17:39.13:580,39,0	0/0:23,0:23:69.17:0,69,816	1/1:2,39:41:99:1452,99,0	0/0:3,0:3:6:0,6,61
chr10	88984378	.	CA	C	3005.15	PASS	AB=0.893;AC=19;AF=0.339;AN=56;BaseQRankSum=3.508;DP=611;FS=6.879;HRun=11;HaplotypeScore=102.3443;InbreedingCoeff=0.8884;MQ=80.32;MQ0=0;MQRankSum=-4.565;QD=12.90;ReadPosRankSum=1.656;VQSLOD=3.4098;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:12:14.25:42,14,0	0/0:6,0:6:18.05:0,18,192	0/1:22,3:25:48.68:49,0,237	0/0:21,0:23:22.85:0,23,225	1/1:2,20:23:46.96:375,47,0	1/1:5,17:23:52.94:425,53,0	1/1:4,24:28:68.91:567,69,0	0/0:7,0:24:57.72:0,58,346	1/1:8,0:37:54.99:162,55,0	0/0:23,0:23:48.11:0,48,512	0/0:22,1:24:47.87:0,48,470	1/1:2,18:21:50.93:419,51,0	0/0:22,0:23:56.97:0,57,584	1/1:4,15:19:41.94:345,42,0	0/0:19,1:21:26.32:0,26,469	0/0:20,0:20:39.10:0,39,416	0/0:28,1:30:44.26:0,44,629	1/1:8,16:24:47.89:394,48,0	0/0:17,0:18:40.60:0,41,222	0/0:15,0:16:37.79:0,38,211	0/0:15,1:16:11.42:0,11,313	1/1:3,18:21:53.51:442,54,0	0/0:14,0:14:20.29:0,20,365	0/0:27,3:30:10.82:0,11,514	0/0:19,0:19:41.31:0,41,228	0/0:25,0:25:51.13:0,51,544	0/0:41,0:42:99:0,102,558	0/0:4,0:4:6:0,6,56
chr10	88984399	.	CA	C	1019.10	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.911;DP=613;FS=5.655;HRun=8;HaplotypeScore=131.2881;InbreedingCoeff=0.9615;MQ=69.89;MQ0=4;MQRankSum=-7.847;QD=23.16;ReadPosRankSum=1.531;VQSLOD=2.4177;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,12:13:33.05:317,33,0	0/0:9,0:9:20.23:0,20,211	0/0:36,1:25:27.71:0,28,455	0/0:29,0:17:17.60:0,18,188	0/0:19,0:19:39.07:0,39,445	0/0:25,0:25:66.09:0,66,750	0/0:27,0:27:63.17:0,63,740	0/0:23,0:23:57.17:0,57,679	1/1:4,27:31:87.08:823,87,0	0/0:20,0:20:42.10:0,42,487	0/0:22,0:22:54.10:0,54,621	0/0:17,1:18:22.19:0,22,529	0/0:23,0:23:54.15:0,54,631	0/0:22,0:22:60.13:0,60,701	0/0:17,0:17:36.04:0,36,388	0/0:25,0:25:53.04:0,53,548	0/0:29,0:29:66.01:0,66,695	0/0:22,0:22:60.09:0,60,675	0/0:19,0:19:51.04:0,51,544	0/0:14,0:14:33.05:0,33,368	0/0:14,0:14:33.10:0,33,398	0/0:20,0:20:53.96:0,54,550	0/0:17,0:17:32.20:0,32,458	0/0:25,0:25:51.08:0,51,574	0/0:20,0:20:54.07:0,54,623	0/0:25,0:25:64.99:0,65,736	0/0:43,0:43:99:0,108,1262	0/0:5,0:5:9.03:0,9,109
chr10	88984410	.	GGGAAGGAA	G	3540.99	PASS	AB=1.000;AC=34;AF=0.680;AN=50;BaseQRankSum=0.099;DP=593;FS=11.151;HRun=0;HaplotypeScore=187.5771;InbreedingCoeff=0.2409;MQ=65.83;MQ0=13;MQRankSum=-0.427;QD=8.57;ReadPosRankSum=-2.260;VQSLOD=1.6280;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:6.61:0,7,74	1/1:3,4:7:12.04:257,12,0	./.	./.	1/1:12,1:12:8.94:92,9,0	1/1:18,6:24:30.09:400,30,0	1/1:25,0:24:21.03:244,21,0	./.	0/1:29,0:29:33.09:33,0,77	1/1:13,4:17:9.02:151,9,0	1/1:9,12:21:17.82:180,18,0	1/1:17,1:18:12.03:171,12,0	1/1:23,0:23:8.92:124,9,0	1/1:17,5:22:41.98:548,42,0	0/1:16,0:16:39.60:40,0,67	0/1:26,0:26:37.82:244,0,38	1/1:18,12:30:15.05:316,15,0	1/1:20,2:22:1.31:305,1,0	0/0:21,0:20:3:0,3,28	1/1:10,0:10:3.01:56,3,0	0/0:14,0:14:12.31:0,12,82	1/1:13,0:13:6.02:103,6,0	0/0:22,0:21:7.27:0,7,43	1/1:25,0:26:3.01:32,3,0	0/0:17,0:17:17.83:0,18,129	0/1:30,0:30:48.34:126,0,48	0/1:36,0:36:85.81:91,0,86	0/1:5,0:5:17.98:30,0,18
chr10	88984451	.	GGAAGGAAGGAAGGAAA	G	4767.70	PASS	AB=1.000;AC=26;AF=0.481;AN=54;BaseQRankSum=-1.929;DP=530;FS=6.207;HRun=0;HaplotypeScore=237.7578;InbreedingCoeff=0.6291;MQ=52.83;MQ0=7;MQRankSum=-0.584;QD=16.22;ReadPosRankSum=-1.729;VQSLOD=2.8956;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:84.50:102,0,85	0/0:8,0:8:24.03:0,24,343	0/0:8,0:3:5.74:0,6,30	./.	0/0:17,0:16:38.69:0,39,615	0/0:24,0:24:60.35:0,60,901	0/0:28,0:27:55.46:0,55,879	1/1:13,0:13:21.02:193,21,0	0/1:18,0:18:4.40:247,0,4	0/0:26,0:26:55.77:0,56,885	0/0:24,0:24:39.36:0,39,895	0/0:17,0:17:44.60:0,45,741	1/1:1,19:20:8.77:368,9,0	0/0:25,0:25:54.90:0,55,1179	0/1:22,0:22:29.49:29,0,40	1/1:1,27:28:24.08:789,24,0	0/0:27,0:26:47.33:0,47,1023	0/0:20,0:19:35.78:0,36,647	1/1:9,0:9:17.90:143,18,0	1/1:12,0:12:23.92:286,24,0	1/1:17,0:17:35.84:377,36,0	0/0:7,0:7:9.77:0,10,63	1/1:3,23:26:10.39:121,10,0	1/1:3,22:25:2.03:112,2,0	0/1:18,0:18:35.45:193,0,35	1/1:3,32:34:89.49:1177,89,0	1/1:29,0:29:44.53:511,45,0	1/1:1,9:10:3.01:118,3,0
chr10	88984455	.	GGAAGGAAGGAAA	G	3811.46	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=0.138;DP=533;FS=0.904;HRun=0;HaplotypeScore=200.8268;InbreedingCoeff=0.7237;MQ=53.18;MQ0=6;MQRankSum=-1.598;QD=12.92;ReadPosRankSum=-0.736;VQSLOD=2.6831;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:5.83:134,0,6	0/0:9,0:9:21.73:0,22,162	0/0:9,0:3:5.72:0,6,29	0/0:8,0:3:2.19:0,2,66	0/0:16,0:16:38.44:0,38,322	0/0:25,0:25:38.32:0,38,388	0/0:33,0:32:68.02:0,68,643	1/1:9,0:9:23.97:212,24,0	1/1:19,0:19:32.56:280,33,0	0/0:24,0:24:56.05:0,56,648	0/0:23,0:23:34.52:0,35,478	0/0:16,0:16:40.45:0,40,407	1/1:19,0:19:8.90:231,9,0	0/0:27,0:27:27.22:0,27,570	1/1:3,19:22:3.01:108,3,0	1/1:27,0:27:14.03:446,14,0	0/0:28,0:27:53.48:0,53,529	0/0:20,0:19:15.69:0,16,300	1/1:7,0:7:17.90:143,18,0	1/1:11,0:11:29.92:310,30,0	1/1:18,0:18:34.65:292,35,0	0/1:7,0:7:8.97:9,0,66	1/1:26,0:26:0.01:2,0,0	1/1:25,0:25:2.78:67,3,0	1/1:19,0:19:28.82:255,29,0	1/1:34,0:33:77.35:767,77,0	1/1:29,0:29:47.52:482,48,0	1/1:10,0:10:3.01:72,3,0
chr10	88985039	.	A	AC	10287.54	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.394;DP=785;FS=0.917;HRun=0;HaplotypeScore=90.0786;InbreedingCoeff=0.9986;MQ=84.21;MQ0=0;MQRankSum=-3.037;QD=42.51;ReadPosRankSum=1.883;VQSLOD=5.3419;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,162,2226	0/0:7,0:7:21.06:0,21,277	0/0:32,0:32:87.25:0,87,1176	0/0:17,0:17:51.11:0,51,671	1/1:2,36:38:99:1612,105,0	1/1:1,28:29:84.29:1330,84,0	1/1:1,28:24:66.23:1054,66,0	1/1:3,34:37:99:1556,102,0	0/0:23,0:23:69.22:0,69,947	0/0:32,0:32:87.28:0,87,1199	0/0:18,0:18:48.15:0,48,654	1/1:3,29:32:84.28:1317,84,0	0/0:24,0:24:72.22:0,72,988	1/1:1,27:28:78.20:1214,78,0	0/0:42,0:42:99:0,120,1660	0/0:21,0:20:60.20:0,60,839	0/0:25,0:25:75.23:0,75,1030	1/1:0,21:20:60.20:958,60,0	0/0:32,0:32:96.30:0,96,1310	0/0:31,0:31:90.28:0,90,1239	0/0:35,0:35:99:0,105,1448	1/1:0,28:28:78.27:1245,78,0	0/0:21,0:21:63.20:0,63,863	0/0:38,0:38:99:0,114,1575	0/0:31,0:31:90.29:0,90,1242	0/0:34,0:34:99:0,102,1411	0/0:19,0:19:57.16:0,57,758	0/0:7,0:7:21.06:0,21,278
chr10	88985296	.	AC	A	19346.09	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=10.967;DP=682;FS=0.335;HRun=1;HaplotypeScore=90.4889;InbreedingCoeff=0.9988;MQ=76.17;MQ0=0;MQRankSum=-3.019;QD=36.99;ReadPosRankSum=6.271;VQSLOD=4.7011;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:99:1424,105,0	0/0:9,0:9:26.95:0,27,345	0/0:18,1:19:56.19:0,56,785	0/0:24,0:24:69.13:0,69,1018	1/1:0,25:25:66.06:835,66,0	1/1:0,27:27:78.26:1090,78,0	1/1:0,25:25:72.24:1007,72,0	0/0:30,0:30:90.26:0,90,1324	1/1:0,24:24:72.24:1000,72,0	0/0:24,0:24:69.22:0,69,1042	0/0:19,0:19:38.83:0,39,562	1/1:0,18:18:45.15:629,45,0	1/1:0,33:33:93.31:1296,93,0	1/1:0,29:29:78.26:1090,78,0	1/1:0,28:28:72.24:1006,72,0	1/1:0,24:24:66.22:923,66,0	0/0:34,0:34:99:0,102,1507	1/1:0,36:36:87.29:1216,87,0	1/1:1,17:18:54.16:729,54,0	1/1:0,15:15:45.15:628,45,0	1/1:0,28:28:71.05:969,71,0	1/1:0,21:21:54.10:733,54,0	1/1:0,15:15:33.11:461,33,0	1/1:0,36:36:99:1426,102,0	1/1:0,18:18:27.09:378,27,0	1/1:0,31:31:90.20:1165,90,0	1/1:0,25:25:75.25:1048,75,0	1/1:0,10:9:21.07:294,21,0
chr10	88985487	.	AGAAGG	A	11772.92	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=15.464;DP=608;FS=3.088;HRun=0;HaplotypeScore=115.6588;InbreedingCoeff=0.9785;MQ=78.76;MQ0=0;MQRankSum=-3.597;QD=41.45;ReadPosRankSum=4.655;VQSLOD=4.9573;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:29:51.17:1147,51,0	0/0:4,0:4:12.04:0,12,376	0/0:21,0:19:54.04:0,54,1347	0/0:26,0:25:64.03:0,64,1599	0/0:17,0:17:45.09:0,45,1311	0/0:22,0:22:54.19:0,54,1719	0/0:19,0:18:54.09:0,54,1479	0/0:28,0:27:81.23:0,81,2192	1/1:0,18:18:36.11:834,36,0	0/0:25,0:25:72.22:0,72,2027	0/0:24,0:24:69.18:0,69,1937	0/0:34,0:34:66.21:0,66,2066	1/1:0,29:27:48.16:1096,48,0	0/0:27,0:27:72.25:0,72,2321	1/1:0,16:14:14.92:348,15,0	1/1:0,19:16:26.63:627,27,0	0/0:29,0:29:81.21:0,81,2331	0/0:22,0:22:66.07:0,66,1721	1/1:0,19:15:42.01:624,42,0	1/1:0,22:20:57.08:1165,57,0	1/1:1,13:14:36.08:783,36,0	0/0:26,0:26:69.16:0,69,1974	1/1:0,11:11:21.07:486,21,0	1/1:0,24:24:57.14:1274,57,0	1/1:0,24:23:36.12:818,36,0	1/1:0,32:26:72.13:1321,72,0	1/1:0,22:21:48.16:1111,48,0	1/1:0,4:4:6.02:139,6,0
chr10	88986890	.	CA	C	4471.06	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=12.001;DP=594;FS=10.367;HRun=11;HaplotypeScore=59.2842;InbreedingCoeff=0.9902;MQ=73.95;MQ0=0;MQRankSum=1.024;QD=19.52;ReadPosRankSum=0.287;VQSLOD=5.4604;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:30:71.90:591,72,0	0/0:13,0:14:38.93:0,39,398	0/0:14,0:14:18.48:0,18,176	0/0:19,0:17:17.96:0,18,166	1/1:5,19:24:24.93:411,25,0	1/1:1,25:26:62.93:517,63,0	1/1:3,13:16:32.95:271,33,0	1/1:8,24:33:44.70:537,45,0	1/1:1,19:20:50.94:419,51,0	0/0:24,0:24:36.54:0,37,583	0/0:30,0:30:78.20:0,78,831	1/1:1,19:20:56.93:468,57,0	0/0:22,1:23:23.42:0,23,433	1/1:1,17:18:50.94:419,51,0	0/0:17,0:17:27.07:0,27,403	0/0:20,1:21:26.48:0,26,487	0/0:17,1:18:20.48:0,20,423	1/1:1,14:15:35.96:296,36,0	0/0:15,0:15:33.08:0,33,352	0/0:34,0:34:87.16:0,87,909	0/0:13,0:14:38.93:0,39,398	1/1:4,23:27:65.90:542,66,0	0/0:18,0:19:47.98:0,48,487	0/0:12,0:12:33.08:0,33,352	0/0:17,1:18:26.48:0,26,481	0/0:29,0:29:72.17:0,72,756	0/0:32,1:33:38.10:0,38,815	0/0:11,0:11:11.13:0,11,298
chr10	88988155	.	G	GAGC	22151.66	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-1.411;DP=727;FS=12.323;HRun=0;HaplotypeScore=106.4355;InbreedingCoeff=0.9977;MQ=81.27;MQ0=0;MQRankSum=-4.718;QD=62.58;ReadPosRankSum=1.882;VQSLOD=5.8841;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,58:60:99:3992,163,0	0/0:14,0:14:42.14:0,42,780	0/0:24,0:25:57.14:0,57,933	0/0:16,0:16:31.06:0,31,597	1/1:2,22:25:63.22:1541,63,0	1/1:4,28:32:78.27:1921,78,0	1/1:3,14:17:42.14:1034,42,0	1/1:2,15:19:57.18:1275,57,0	1/1:3,16:19:48.16:1182,48,0	0/0:37,0:37:99:0,108,1976	0/0:12,0:12:36.11:0,36,632	1/1:1,25:27:69.24:1699,69,0	0/0:35,0:35:99:0,105,1877	1/1:1,23:25:60.21:1477,60,0	0/0:31,0:31:93.30:0,93,1702	0/0:36,0:36:99:0,108,2005	0/0:20,0:20:57.20:0,57,1054	1/1:0,14:14:39.13:961,39,0	1/1:3,12:15:45.15:1098,45,0	1/1:6,19:26:54.19:1317,54,0	0/0:31,0:31:93.30:0,93,1702	1/1:2,19:23:57.20:1403,57,0	0/0:32,0:32:93.32:0,93,1714	0/0:40,0:40:99:0,117,2103	1/1:1,18:20:48.16:1183,48,0	0/0:39,0:39:99:0,117,2104	1/1:1,31:32:84.29:2069,84,0	0/0:5,0:5:15.05:0,15,280
chr10	88992514	.	TACAC	T	1606.76	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=2.071;DP=642;FS=41.596;HRun=0;HaplotypeScore=150.1806;InbreedingCoeff=0.2243;MQ=65.18;MQ0=4;MQRankSum=4.990;QD=12.65;ReadPosRankSum=-4.913;VQSLOD=0.0580;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:33.11:0,33,549	0/0:16,0:16:42.13:0,42,726	0/0:26,0:21:44.86:0,45,1113	0/0:27,0:16:4.84:0,5,435	0/0:21,0:21:40.46:0,40,727	0/0:23,0:23:44.34:0,44,701	0/0:21,0:21:52.42:0,52,967	1/1:3,39:41:30.93:1688,31,0	0/0:26,0:27:60.21:0,60,932	0/0:25,0:25:69.19:0,69,1397	0/0:18,0:18:47.99:0,48,791	0/0:14,0:14:29.47:0,29,451	0/0:29,0:29:2.80:0,3,156	0/0:25,0:25:59.63:0,60,930	0/1:17,0:17:11.57:12,0,36	0/1:31,0:31:0.84:1,0,84	0/0:27,0:26:53.80:0,54,845	0/0:12,0:11:33:0,33,522	0/0:25,0:23:65.31:0,65,1173	0/0:23,0:23:60.19:0,60,950	0/0:11,0:11:4.16:0,4,36	0/0:31,0:30:58.95:0,59,1106	0/1:19,0:18:17.45:17,0,70	0/1:18,0:18:2.04:2,0,18	0/0:21,0:21:40.21:0,40,693	0/0:5,0:23:7.89:0,8,270	0/0:24,0:24:37.52:0,38,1082	0/0:18,0:18:3.06:0,3,40
chr10	88992517	.	A	ACT	1547.52	PASS	AB=1.000;AC=46;AF=0.852;AN=54;BaseQRankSum=1.346;DP=748;FS=10.401;HRun=0;HaplotypeScore=187.7531;InbreedingCoeff=0.0371;MQ=59.40;MQ0=4;MQRankSum=-0.031;QD=2.33;ReadPosRankSum=-3.314;VQSLOD=1.3148;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:2.49:0,2,9	1/1:18,0:18:2.49:9,2,0	./.	0/0:25,0:14:0:0,0,0	1/1:26,0:25:5.64:61,6,0	1/1:29,0:29:16.82:112,17,0	1/1:27,0:27:6.47:56,6,0	0/1:52,0:51:12.76:80,0,13	0/1:28,0:28:3.18:3,0,39	1/1:31,0:31:4.86:122,5,0	1/1:20,0:20:2.47:25,2,0	1/1:21,0:21:1.65:22,2,0	1/1:32,0:32:24.57:182,25,0	1/1:30,0:30:2.87:24,3,0	1/1:24,0:24:14.99:138,15,0	1/1:29,0:29:8.23:63,8,0	1/1:27,0:26:10.89:80,11,0	0/1:16,0:15:15.96:17,0,16	1/1:27,0:25:9.48:95,9,0	1/1:20,4:24:5.95:62,6,0	1/1:17,0:17:3.46:25,3,0	1/1:37,0:36:2.95:38,3,0	1/1:22,0:21:2.99:23,3,0	1/1:20,0:20:3.48:30,3,0	1/1:24,0:24:3.25:43,3,0	1/1:37,0:35:27.07:174,27,0	0/1:25,0:25:6.68:155,0,7	1/1:20,0:20:3.41:19,3,0
chr10	88992552	.	CTCTCTG	C	1642.02	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=-6.749;DP=628;FS=23.629;HRun=0;HaplotypeScore=144.2638;InbreedingCoeff=-0.1684;MQ=63.98;MQ0=21;MQRankSum=-0.821;QD=6.67;ReadPosRankSum=-3.954;VQSLOD=-0.1408;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:2.94:0,3,17	0/0:9,0:9:12.31:0,12,161	0/0:43,0:21:19.03:0,19,321	0/0:47,0:16:24.34:0,24,282	0/1:12,0:11:35.92:36,0,67	0/1:24,0:24:99:141,0,135	0/1:21,0:21:85.43:153,0,85	0/1:26,0:25:99:238,0,426	1/1:5,18:23:18.06:379,18,0	0/0:25,0:24:69.05:0,69,1306	0/0:9,0:9:14.94:0,15,160	0/1:20,0:20:51.70:107,0,52	0/0:30,0:30:68.72:0,69,1001	0/1:22,0:22:44.11:102,0,44	0/0:23,0:23:35.99:0,36,604	0/0:25,0:25:11.07:0,11,227	0/0:25,0:25:14.97:0,15,428	0/1:17,0:16:22.53:121,0,23	0/1:12,0:11:29.65:30,0,236	0/1:11,0:11:32.55:121,0,33	0/0:12,0:12:18.46:0,18,208	0/1:19,0:19:9.62:164,0,10	0/0:32,0:31:5.53:0,6,146	0/0:23,0:23:6.49:0,6,376	0/1:14,0:14:96.76:97,0,111	0/0:40,0:38:97.39:0,97,1584	0/1:25,0:25:99:114,0,503	0/0:9,0:9:22.76:0,23,346
chr10	88992554	.	C	CTCTCTG	2662	PASS	AB=0.968;AC=26;AF=0.464;AN=56;BaseQRankSum=-4.077;DP=627;FS=10.956;HRun=0;HaplotypeScore=152.3075;InbreedingCoeff=0.0119;MQ=68.43;MQ0=20;MQRankSum=0.884;QD=6.41;ReadPosRankSum=4.668;VQSLOD=1.9279;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:3.01:0,3,36	0/1:8,0:8:38.21:38,0,63	0/0:46,0:25:54.88:0,55,476	0/0:45,0:17:38.42:0,38,384	0/1:10,0:9:47.96:48,0,63	0/1:21,0:21:39.54:40,0,165	0/0:21,0:21:17.76:0,18,167	0/0:26,0:25:63.46:0,63,506	0/1:21,0:22:2.33:2,0,150	0/1:25,0:24:12.81:13,0,375	0/0:10,0:10:8.66:0,9,75	0/0:21,0:21:14.91:0,15,117	1/1:30,0:30:47.46:672,47,0	0/1:20,0:20:2.79:3,0,127	1/1:26,0:26:35.97:462,36,0	1/1:2,1:30:5.76:228,6,0	0/1:23,0:24:37.23:37,0,181	0/1:13,0:12:5.59:6,0,114	0/1:9,0:8:18.08:18,0,46	0/0:11,0:11:8.60:0,9,166	1/1:14,0:14:17.99:172,18,0	0/1:18,0:18:33.61:34,0,168	0/1:6,0:33:14.10:66,0,14	1/1:23,0:23:29.77:293,30,0	0/1:13,0:13:8.29:8,0,148	0/1:41,0:39:68.68:522,0,69	0/1:25,0:25:42.52:43,0,292	1/1:9,0:9:17.53:137,18,0
chr10	88992556	.	CTG	C	2384.93	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-4.081;DP=629;FS=24.467;HRun=0;HaplotypeScore=114.5760;InbreedingCoeff=0.4900;MQ=70.07;MQ0=19;MQRankSum=-1.967;QD=7.32;ReadPosRankSum=-3.297;VQSLOD=1.1429;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:3.01:46,3,0	0/0:7,0:7:11.83:0,12,109	0/0:47,0:26:27.22:0,27,421	0/0:45,0:18:22.60:0,23,297	1/1:13,0:12:7.26:143,7,0	1/1:21,0:21:1.93:160,2,0	1/1:22,0:22:19.28:221,19,0	1/1:27,0:26:28.19:413,28,0	1/1:22,0:22:17.88:130,18,0	0/0:25,0:24:4.95:0,5,455	0/1:10,0:10:6.10:6,0,97	1/1:21,0:21:26.31:203,26,0	0/0:30,0:30:20.87:0,21,534	1/1:20,0:20:11.75:161,12,0	0/0:27,0:27:50.93:0,51,498	0/0:25,0:25:14.03:0,14,122	0/1:25,0:25:25.21:25,0,219	1/1:12,0:11:12.31:141,12,0	0/1:12,0:11:17.92:153,0,18	1/1:12,0:12:26.22:215,26,0	0/0:15,0:15:23.82:0,24,226	1/1:18,0:18:26.52:204,27,0	0/0:33,0:33:3.20:0,3,39	0/1:23,0:23:12.34:12,0,247	1/1:12,0:12:17.41:146,17,0	0/0:40,0:38:0.42:0,0,776	0/1:23,0:23:45.59:201,0,46	0/0:9,0:9:6.41:0,6,126
chr10	88995362	.	A	AAAC	1363.45	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.330;DP=717;FS=1.679;HRun=0;HaplotypeScore=98.4670;InbreedingCoeff=0.9992;MQ=81.57;MQ0=0;MQRankSum=-2.505;QD=59.28;ReadPosRankSum=-4.375;VQSLOD=3.7684;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1842	0/0:13,0:13:36.12:0,36,614	0/0:16,0:16:42.11:0,42,671	0/0:24,0:24:72.17:0,72,1100	0/0:32,0:32:96.31:0,96,1610	0/0:23,0:23:66.23:0,66,1121	0/0:35,0:35:92:0,92,1676	1/1:3,19:23:69.22:1458,69,0	0/0:30,0:30:87.29:0,87,1449	0/0:39,0:39:99:0,114,1938	0/0:25,0:25:69.24:0,69,1177	0/0:29,0:29:84.28:0,84,1407	0/0:24,0:24:69.23:0,69,1152	0/0:34,0:34:96.33:0,96,1623	0/0:24,0:24:72.23:0,72,1201	0/0:33,0:33:96.31:0,96,1591	0/0:35,0:35:99:0,102,1734	0/0:23,0:22:60.19:0,60,984	0/0:20,0:20:51.08:0,51,842	0/0:11,0:11:30.10:0,30,512	0/0:34,0:34:96.33:0,96,1631	0/0:25,0:25:63.22:0,63,1072	0/0:19,0:19:57.20:0,57,972	0/0:21,0:21:60.20:0,60,991	0/0:27,0:27:81.28:0,81,1382	0/0:24,0:24:63.21:0,63,1050	0/0:22,0:21:63.22:0,63,1074	0/0:13,0:13:36.12:0,36,614
chr10	88996201	.	A	AC	6164.77	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-9.553;DP=642;FS=0.724;HRun=1;HaplotypeScore=72.6650;InbreedingCoeff=0.9651;MQ=90.94;MQ0=0;MQRankSum=-1.432;QD=40.56;ReadPosRankSum=2.157;VQSLOD=5.4730;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,50:51:99:2136,144,0	0/0:11,0:11:33.09:0,33,410	0/0:32,0:32:90.26:0,90,1115	0/0:19,0:19:45.11:0,45,560	0/0:26,0:26:78.25:0,78,1001	0/0:18,0:18:54.18:0,54,700	0/0:24,0:24:69.19:0,69,878	0/0:17,0:17:51.15:0,51,637	1/1:0,20:20:57.19:854,57,0	0/0:29,0:29:87.28:0,87,1128	0/0:16,0:16:45.15:0,45,583	0/0:18,0:18:54.18:0,54,701	0/0:29,0:29:84.27:0,84,1089	0/0:22,0:22:63.20:0,63,816	0/0:22,0:22:66.21:0,66,855	0/0:34,0:34:96.31:0,96,1246	0/0:36,0:36:99:0,108,1387	0/0:24,0:24:66.21:0,66,856	1/1:3,14:17:45.15:674,45,0	1/1:0,18:18:48.16:719,48,0	0/0:40,0:40:99:0,117,1518	0/0:14,0:14:39.13:0,39,506	0/0:9,0:9:27.09:0,27,350	0/0:23,0:23:66.21:0,66,857	1/1:1,17:18:48.16:718,48,0	0/0:26,0:26:75.24:0,75,973	1/1:2,26:28:72.24:1064,72,0	0/0:1,0:1:3.01:0,3,39
chr10	88997419	.	TAA	T	2838.15	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=9.448;DP=530;FS=2.445;HRun=12;HaplotypeScore=94.0391;InbreedingCoeff=0.9502;MQ=77.17;MQ0=1;MQRankSum=-1.968;QD=22.35;ReadPosRankSum=5.179;VQSLOD=3.5239;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:32:62.63:0,63,223	0/0:3,0:3:9.03:0,9,133	0/0:18,0:17:26.79:0,27,288	0/0:16,0:16:19.09:0,19,220	0/0:21,0:22:53.66:0,54,740	0/0:20,0:20:48.16:0,48,699	0/0:9,0:9:24.06:0,24,339	0/0:8,1:31:33.60:0,34,224	0/0:4,0:19:37.31:0,37,131	0/0:24,0:24:51.17:0,51,758	0/0:15,0:17:50.65:0,51,696	0/0:18,0:18:42.13:0,42,608	1/1:2,19:21:54.11:549,54,0	0/0:18,0:18:51.15:0,51,726	1/1:1,24:25:66.15:671,66,0	1/1:3,9:13:2.55:201,3,0	0/0:24,0:25:69.19:0,69,976	0/0:27,0:27:72.22:0,72,1002	0/0:26,0:25:63.21:0,63,940	0/0:24,0:25:63.20:0,63,904	1/1:3,8:10:18.03:183,18,0	0/0:16,0:19:38.60:0,39,509	1/1:2,18:20:45.06:458,45,0	1/1:1,16:17:42.09:427,42,0	0/0:16,0:17:47.64:0,48,659	1/1:1,14:15:42.07:426,42,0	0/0:13,0:13:31.34:0,31,434	1/1:1,4:5:12.01:122,12,0
chr10	88997849	.	TG	T	6605.65	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.500;DP=782;FS=5.291;HRun=2;HaplotypeScore=74.8655;InbreedingCoeff=1.0000;MQ=81.76;MQ0=0;MQRankSum=-7.547;QD=36.10;ReadPosRankSum=1.103;VQSLOD=5.4739;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,52:53:99:1987,153,0	0/0:17,0:17:51.17:0,51,764	0/0:23,0:23:69.21:0,69,998	0/0:19,0:19:57.02:0,57,821	0/0:25,0:25:72.24:0,72,1076	0/0:23,0:23:69.23:0,69,1034	0/0:41,0:41:99:0,123,1842	0/0:23,0:23:66.22:0,66,971	1/1:0,27:27:78.25:1013,78,0	0/0:21,0:20:63.20:0,63,926	0/0:15,0:15:42.13:0,42,608	0/0:33,0:33:99:0,99,1484	0/0:26,0:26:75.24:0,75,1096	0/0:30,0:30:90.29:0,90,1324	0/0:28,0:28:84.28:0,84,1257	0/0:36,0:36:99:0,108,1579	0/0:34,0:34:99:0,102,1524	0/0:24,0:24:69.22:0,69,1003	1/1:0,26:26:78.24:997,78,0	1/1:0,26:25:60.20:779,60,0	0/0:76,0:76:99:0,220,3260	0/0:15,0:15:45.14:0,45,655	0/0:17,0:17:51.17:0,51,762	0/0:35,0:35:99:0,105,1572	1/1:0,24:24:66.21:856,66,0	0/0:24,0:24:66.17:0,66,946	1/1:0,27:27:75.24:974,75,0	0/0:14,0:14:42.14:0,42,629
chr10	88998187	.	A	ATC	7683.79	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=6.259;DP=641;FS=19.573;HRun=0;HaplotypeScore=157.2672;InbreedingCoeff=0.9102;MQ=75.91;MQ0=1;MQRankSum=-7.241;QD=20.77;ReadPosRankSum=-0.270;VQSLOD=3.3283;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,12:32:51.07:652,51,0	0/0:13,0:13:36.08:0,36,429	0/0:33,0:27:38.46:0,38,457	0/0:45,0:33:44.12:0,44,501	0/0:18,0:18:33.09:0,33,420	0/0:22,0:22:57.17:0,57,711	0/0:13,0:13:27.06:0,27,317	0/1:37,0:37:99:117,0,116	1/1:21,1:22:9.03:142,9,0	0/0:23,0:23:51.13:0,51,603	0/0:9,0:9:24.08:0,24,304	0/0:13,0:13:36.10:0,36,439	1/1:18,10:28:54.59:738,55,0	0/0:26,0:26:57.09:0,57,675	1/1:20,8:26:44.86:622,45,0	1/1:8,11:18:42.07:593,42,0	0/0:22,0:22:42.59:0,43,522	0/0:9,0:9:17.42:0,17,198	1/1:14,8:21:39.49:510,39,0	1/1:13,13:26:59.12:756,59,0	1/1:24,7:30:27.08:387,27,0	0/0:22,0:22:57.17:0,57,712	1/1:10,8:18:32.98:416,33,0	1/1:12,1:13:8.90:201,9,0	1/1:16,8:25:39:486,39,0	1/1:19,9:28:24.52:798,25,0	1/1:17,6:23:43.39:631,43,0	1/1:14,3:17:48.06:634,48,0
chr10	88998203	.	G	GTC	5716.91	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=10.040;DP=654;FS=11.793;HRun=0;HaplotypeScore=169.8109;InbreedingCoeff=0.9353;MQ=56.69;MQ0=12;MQRankSum=-8.971;QD=18.44;ReadPosRankSum=1.124;VQSLOD=4.3967;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:32:48.07:627,48,0	0/0:10,0:10:24.08:0,24,302	0/0:48,0:22:24.23:0,24,252	0/0:65,0:26:19.69:0,20,268	0/0:19,0:19:48.13:0,48,586	0/0:21,0:21:57.18:0,57,711	0/0:16,0:16:35.91:0,36,398	0/0:38,0:38:69.11:0,69,747	1/1:23,0:23:1.96:89,2,0	0/0:22,0:22:53.49:0,53,606	0/0:10,0:10:24.06:0,24,289	0/0:15,0:15:33.08:0,33,397	1/1:8,13:21:39.60:560,40,0	0/0:26,0:26:69.11:0,69,802	1/1:13,6:18:26.32:377,26,0	1/1:8,10:17:32.68:447,33,0	0/0:18,0:18:50.87:0,51,588	0/0:8,0:8:21.02:0,21,244	1/1:21,0:20:24.08:376,24,0	1/1:31,0:30:44.95:676,45,0	1/1:19,7:26:10.47:114,10,0	0/0:28,0:28:72.18:0,72,864	1/1:12,6:18:19.53:228,20,0	1/1:9,2:11:9.21:66,9,0	1/1:22,0:22:34.95:439,35,0	1/1:22,9:30:4.21:768,4,0	1/1:24,0:24:35.99:543,36,0	1/1:8,4:12:27.09:407,27,0
chr10	88998204	.	T	TCTCTCTCTCTCTCC	10295.90	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=7.699;DP=672;FS=15.014;HRun=0;HaplotypeScore=290.1189;InbreedingCoeff=0.8793;MQ=55.79;MQ0=12;MQRankSum=-9.858;QD=31.58;ReadPosRankSum=-0.892;VQSLOD=2.5926;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:31:53.98:774,54,0	0/0:10,0:10:24.08:0,24,740	0/0:48,0:22:29.33:0,29,384	0/0:67,0:26:21.60:0,22,321	0/0:19,0:19:27.93:0,28,972	0/0:22,0:22:58.01:0,58,1529	0/0:16,0:16:33.09:0,33,607	0/0:37,0:37:73.26:0,73,769	1/1:13,11:24:9.03:312,9,0	0/0:22,0:22:54.18:0,54,1740	0/0:10,0:10:24.08:0,24,749	0/0:15,0:15:35.68:0,36,909	1/1:20,0:20:45.11:901,45,0	0/0:26,0:26:68.83:0,69,1691	1/1:20,0:19:33.07:579,33,0	1/1:18,0:17:42.12:817,42,0	0/0:18,0:18:30.08:0,30,1453	0/0:8,0:8:16.46:0,16,398	1/1:22,0:21:9.12:1226,9,0	1/1:32,0:30:50.57:1132,51,0	1/1:27,0:25:12.34:146,12,0	0/0:28,0:28:70.83:0,71,1696	1/1:22,0:21:23.01:235,23,0	1/1:12,0:12:2.51:56,3,0	1/1:24,0:24:38.30:839,38,0	0/1:35,0:34:36.54:1211,0,37	1/1:26,0:26:57.10:1652,57,0	1/1:12,0:12:27.09:416,27,0
chr10	88998228	.	CTTCT	C	156.25	PASS	AB=0.985;AC=15;AF=0.268;AN=56;BaseQRankSum=2.395;DP=687;FS=1.753;HRun=0;HaplotypeScore=207.7124;InbreedingCoeff=-0.2226;MQ=42.62;MQ0=30;MQRankSum=-2.963;QD=0.47;ReadPosRankSum=-6.155;VQSLOD=1.1434;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:24,2:25:27.37:27,0,446	0/0:9,0:9:27.08:0,27,670	0/0:70,0:18:33.25:0,33,458	0/0:87,0:13:12.29:0,12,315	0/1:25,0:25:0.20:0,0,659	0/0:23,0:23:37.90:0,38,876	0/0:19,0:19:8.87:0,9,687	0/1:35,0:30:51.40:51,0,904	0/0:18,0:18:5.02:0,5,297	0/0:24,0:24:72.24:0,72,1994	0/0:12,0:12:36.11:0,36,933	0/1:14,0:14:12.57:13,0,533	0/1:23,0:23:16.26:16,0,239	0/1:20,0:20:4.52:5,0,804	0/1:22,0:21:19.33:19,0,214	0/0:18,0:18:4.79:0,5,268	0/0:20,0:20:17.20:0,17,1257	0/0:9,0:9:20.77:0,21,337	0/1:19,1:18:19.78:20,0,249	0/1:33,1:32:48.76:49,0,311	1/1:17,0:16:2.38:11,2,0	0/1:30,0:30:6.90:7,0,876	0/0:16,0:14:13.31:0,13,223	0/1:11,0:11:2.10:2,0,42	0/0:26,0:26:10.33:0,10,283	0/1:29,0:28:36.20:36,0,756	0/1:21,1:22:42.60:43,0,332	0/0:4,0:4:7.72:0,8,70
chr10	88998238	.	T	TC	992.80	PASS	AB=0.876;AC=12;AF=0.214;AN=56;BaseQRankSum=7.849;DP=655;FS=0.563;HRun=1;HaplotypeScore=174.0739;InbreedingCoeff=-0.2640;MQ=45.70;MQ0=32;MQRankSum=-7.853;QD=4.22;ReadPosRankSum=-2.005;VQSLOD=-0.5453;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,3:20:0.39:0,0,347	0/0:7,0:7:21.02:0,21,235	0/0:65,0:13:16.08:0,16,252	0/0:99,0:21:20.83:0,21,256	0/1:23,1:24:1.01:1,0,499	0/0:22,0:21:59.94:0,60,793	0/0:17,1:18:14.72:0,15,585	0/0:36,0:34:57.07:0,57,1131	0/1:14,0:14:2.50:2,0,321	0/0:27,0:29:87.20:0,87,1155	0/0:12,0:12:36.12:0,36,500	0/0:13,0:14:42.12:0,42,544	0/1:15,4:19:99:258,0,262	0/0:21,0:21:48.41:0,48,670	0/1:17,3:18:93.22:93,0,219	0/1:15,4:19:95.60:96,0,304	0/0:23,0:23:66.09:0,66,860	0/0:8,0:8:4.14:0,4,273	0/1:13,2:14:99:152,0,254	0/1:23,2:24:99:156,0,303	0/0:7,3:8:0.76:0,1,17	0/0:26,0:26:49.33:0,49,847	0/0:11,2:11:14.06:0,14,208	0/0:10,1:12:6.03:0,6,51	0/1:24,2:26:72.28:72,0,224	0/1:24,4:27:92.08:92,0,777	0/1:16,3:19:99:175,0,250	0/1:3,2:5:31.30:31,0,109
chr10	88998255	.	CCT	C	3638.21	PASS	AB=0.761;AC=27;AF=0.482;AN=56;BaseQRankSum=5.010;DP=670;FS=1.473;HRun=0;HaplotypeScore=170.1297;InbreedingCoeff=0.7432;MQ=49.97;MQ0=39;MQRankSum=-5.757;QD=11.37;ReadPosRankSum=-0.199;VQSLOD=3.6233;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,9:16:7.84:79,8,0	0/0:3,0:3:9.03:0,9,148	0/1:90,0:18:20.63:21,0,56	0/0:111,0:25:15.62:0,16,178	0/0:10,0:23:5.03:0,5,137	0/0:13,0:20:10.88:0,11,208	0/0:9,0:16:25.61:0,26,193	0/0:42,1:38:53.05:0,53,1301	1/1:1,13:14:29.60:371,30,0	0/0:28,0:27:59.84:0,60,988	0/0:13,0:13:39.13:0,39,606	0/0:8,0:14:20.99:0,21,195	1/1:4,11:15:27.08:334,27,0	0/0:9,0:24:1.37:0,1,213	1/1:8,16:22:30.09:366,30,0	1/1:7,9:16:26.01:303,26,0	0/0:22,0:22:54.18:0,54,867	0/0:5,0:8:20.87:0,21,257	1/1:8,8:13:21.06:259,21,0	1/1:9,10:18:27.03:323,27,0	0/1:5,4:7:0:0,0,0	0/0:13,0:24:47.93:0,48,421	1/1:6,9:13:12.03:149,12,0	1/1:5,8:13:5.08:44,5,0	1/1:7,12:19:30.03:337,30,0	0/1:9,20:26:8.61:621,0,9	1/1:10,8:19:20.21:258,20,0	1/1:2,3:5:15.03:173,15,0
chr10	88998296	.	G	GTC	8122.18	PASS	AB=0.632;AC=40;AF=0.714;AN=56;BaseQRankSum=7.873;DP=644;FS=16.145;HRun=0;HaplotypeScore=153.3808;InbreedingCoeff=0.7819;MQ=48.32;MQ0=40;MQRankSum=-3.480;QD=21.83;ReadPosRankSum=0.611;VQSLOD=4.4540;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,10:17:5.08:53,5,0	0/0:9,0:9:27.06:0,27,325	0/0:73,0:13:6.98:0,7,67	0/0:93,1:19:3.46:0,3,45	1/1:7,14:21:24.08:368,24,0	0/1:12,13:25:3.16:439,0,3	1/1:10,7:17:21.06:326,21,0	0/0:33,0:33:57.64:0,58,719	1/1:7,13:20:36.02:585,36,0	0/0:25,0:25:61.35:0,61,797	0/0:16,0:16:26.52:0,27,295	1/1:3,7:10:18.06:303,18,0	1/1:5,10:15:28.45:464,28,0	1/1:9,14:23:24.06:323,24,0	1/1:9,16:24:46.95:754,47,0	1/1:8,10:17:36.12:559,36,0	0/0:19,0:19:51.16:0,51,652	1/1:5,3:8:20.52:270,21,0	0/1:7,11:16:5.38:450,0,5	1/1:7,14:20:29.87:456,30,0	1/1:12,5:17:12.04:199,12,0	1/1:11,7:18:21.06:310,21,0	1/1:10,4:13:9.01:112,9,0	1/1:6,11:17:20.94:281,21,0	1/1:5,16:21:35.52:553,36,0	1/1:12,13:23:50.84:789,51,0	1/1:5,5:10:15.05:243,15,0	1/1:2,8:10:18.06:286,18,0
chr10	88998330	.	GTC	G	1983.36	PASS	AB=0.909;AC=15;AF=0.268;AN=56;BaseQRankSum=1.233;DP=570;FS=17.515;HRun=0;HaplotypeScore=149.1224;InbreedingCoeff=0.8431;MQ=52.27;MQ0=22;MQRankSum=2.980;QD=14.91;ReadPosRankSum=1.291;VQSLOD=2.7647;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:25:28.74:0,29,219	0/0:13,0:13:33.06:0,33,499	0/0:27,0:5:6.02:0,6,100	0/0:84,0:22:23.80:0,24,287	1/1:6,17:23:20.98:267,21,0	1/1:6,23:29:45.14:567,45,0	1/1:4,14:18:14.89:186,15,0	0/0:28,0:27:60.20:0,60,936	0/0:9,0:20:28.97:0,29,233	0/0:21,0:21:42.14:0,42,673	0/0:13,2:15:3.95:0,4,577	1/1:3,6:9:15.05:184,15,0	0/0:16,0:16:24.90:0,25,315	1/1:5,18:23:36.10:453,36,0	0/0:15,0:15:30.09:0,30,358	0/0:14,0:13:21.06:0,21,264	0/0:24,0:24:58.95:0,59,838	1/1:0,8:8:12.04:153,12,0	0/0:15,0:13:33.09:0,33,432	0/0:22,0:22:54.17:0,54,666	0/0:21,0:21:24.07:0,24,287	1/1:4,9:12:27.09:342,27,0	0/1:9,0:10:26.24:26,0,81	0/0:16,0:16:12:0,12,150	0/0:22,0:22:41.50:0,42,497	0/0:15,0:15:33.06:0,33,387	0/0:8,0:8:11.98:0,12,136	0/0:15,0:15:36.11:0,36,429
chr10	88998386	.	T	TTC	6407.24	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=0.064;DP=643;FS=3.494;HRun=0;HaplotypeScore=166.5840;InbreedingCoeff=0.3322;MQ=57.34;MQ0=9;MQRankSum=-2.249;QD=16.06;ReadPosRankSum=-0.689;VQSLOD=4.8470;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:44.40:0,44,206	0/0:15,0:15:42.12:0,42,556	0/0:37,0:16:34.77:0,35,370	0/0:33,0:22:26.96:0,27,438	0/1:22,0:22:35.85:36,0,92	0/1:31,0:31:88.78:89,0,149	0/0:23,0:22:12.45:0,12,149	0/1:39,0:34:74.83:195,0,75	0/1:23,0:23:23.72:24,0,211	0/0:23,0:23:69.11:0,69,876	0/0:25,0:25:66:0,66,878	0/0:16,0:16:14.02:0,14,167	1/1:3,24:27:57.19:962,57,0	0/1:28,0:28:70.44:70,0,171	1/1:1,16:17:45.03:704,45,0	1/1:2,18:20:36.67:727,37,0	0/0:20,0:19:54.08:0,54,669	0/0:15,0:15:7.09:0,7,100	0/1:13,0:12:50.01:65,0,50	0/1:32,0:32:64.28:64,0,215	1/1:3,20:23:42.14:689,42,0	0/1:17,0:17:13.10:13,0,114	1/1:5,20:25:56.23:941,56,0	1/1:4,16:20:39.13:640,39,0	0/1:28,0:28:12.69:13,0,176	1/1:7,19:25:54.13:1006,54,0	0/0:12,0:11:11.37:0,11,127	1/1:6,2:8:14.96:170,15,0
chr10	88998827	.	G	GA	11410.79	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=3.819;DP=683;FS=7.448;HRun=7;HaplotypeScore=121.0246;InbreedingCoeff=0.9996;MQ=74.32;MQ0=0;MQRankSum=2.708;QD=29.49;ReadPosRankSum=3.782;VQSLOD=3.5306;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:64.44:764,64,0	0/0:13,0:13:39.06:0,39,377	0/0:20,0:20:45.06:0,45,434	0/0:17,0:17:36.04:0,36,343	0/0:25,0:25:66.08:0,66,631	0/0:18,0:18:54.09:0,54,521	0/0:26,0:26:66.10:0,66,637	0/0:22,0:21:51.06:0,51,488	1/1:4,22:26:72.22:865,72,0	0/0:31,0:31:75.08:0,75,715	0/0:21,0:21:57.07:0,57,544	0/0:16,0:16:48.08:0,48,463	1/1:1,31:32:90.27:1087,90,0	0/0:27,0:27:78.11:0,78,747	1/1:3,24:26:72.22:870,72,0	1/1:8,21:29:63.19:761,63,0	0/0:28,0:28:72.08:0,72,688	0/0:11,0:11:24.04:0,24,232	1/1:4,13:17:45.10:516,45,0	1/1:5,39:44:99:1288,108,0	1/1:1,10:11:30.09:362,30,0	0/0:21,0:21:63.10:0,63,608	1/1:5,22:27:57.03:672,57,0	1/1:3,18:21:51.16:616,51,0	1/1:3,39:42:99:1232,102,0	1/1:5,30:35:69.02:1038,69,0	1/1:4,30:33:75.23:905,75,0	1/1:5,13:18:36.11:435,36,0
chr10	89000419	.	AGGG	A	57.35	PASS	AB=0.923;AC=11;AF=0.250;AN=44;BaseQRankSum=1.500;DP=286;FS=1.811;HRun=3;HaplotypeScore=50.5766;InbreedingCoeff=0.2135;MQ=20.28;MQ0=121;MQRankSum=-1.500;QD=0.71;ReadPosRankSum=1.918;VQSLOD=-0.7408;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:2:0.89:0,1,2	./.	./.	./.	0/0:12,0:11:0:0,0,0	0/0:8,0:5:5.93:0,6,79	0/0:11,0:3:6.02:0,6,123	0/0:30,0:11:0.67:0,1,34	0/0:8,0:2:0.89:0,1,2	0/0:10,0:4:9.03:0,9,142	0/0:3,0:2:3.76:0,4,16	0/0:11,0:11:15.69:0,16,188	1/1:7,1:3:3.01:44,3,0	0/0:10,0:4:6.02:0,6,100	./.	0/1:9,1:7:10.89:15,0,11	0/1:18,1:5:45.71:46,0,51	0/1:9,0:6:18.59:19,0,106	0/0:13,0:2:5.99:0,6,81	1/1:4,0:2:1.25:3,1,0	0/0:28,1:12:5.47:0,5,47	0/0:7,0:5:8.79:0,9,95	./.	0/0:16,0:4:3.40:0,3,56	./.	0/0:11,0:2:5.82:0,6,33	1/1:9,0:3:2.50:9,2,0	1/1:18,1:5:5.85:37,6,0
chr10	89000429	.	GGA	G	50.37	PASS	AB=0.956;AC=7;AF=0.184;AN=38;BaseQRankSum=0.043;DP=314;FS=1.596;HRun=0;HaplotypeScore=53.1954;InbreedingCoeff=0.0098;MQ=26.40;MQ0=110;MQRankSum=-0.565;QD=0.61;ReadPosRankSum=1.000;VQSLOD=1.1747;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/1:6,1:6:23.90:24,0,34	./.	./.	0/0:17,1:16:8.99:0,9,75	0/0:12,0:8:3:0,3,27	0/0:7,0:3:6.02:0,6,83	0/0:32,0:13:8.81:0,9,53	0/0:8,0:4:2.92:0,3,17	0/0:12,0:6:3.48:0,3,33	0/0:4,0:3:5.85:0,6,60	0/1:17,1:16:35.72:53,0,36	0/0:7,0:3:0.47:0,0,1	0/1:13,0:9:26.72:27,0,81	0/0:4,0:1:2.98:0,3,21	1/1:9,0:6:2.96:25,3,0	0/1:21,1:9:23.31:23,0,54	0/0:12,0:8:15:0,15,163	0/1:12,0:3:0.04:0,0,0	./.	0/0:29,0:13:2.94:0,3,19	0/0:10,1:7:9.02:0,9,115	./.	0/0:17,0:6:0.47:0,0,1	./.	./.	./.	./.
chr10	89000470	.	GAAAGAC	G	4085.97	PASS	AB=0.839;AC=27;AF=0.482;AN=56;BaseQRankSum=3.608;DP=568;FS=3.863;HRun=0;HaplotypeScore=136.4810;InbreedingCoeff=0.7948;MQ=63.19;MQ0=22;MQRankSum=1.106;QD=19.09;ReadPosRankSum=-2.083;VQSLOD=2.8053;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:14:10.42:48,10,0	0/0:17,0:17:44.53:0,45,683	0/0:51,0:26:45.66:0,46,981	0/0:80,0:34:52.26:0,52,809	0/0:25,0:25:54.17:0,54,1057	0/0:14,0:13:32.29:0,32,452	0/0:12,0:12:33.11:0,33,558	0/0:25,0:23:63.21:0,63,1046	0/1:6,0:6:3.98:16,0,4	0/0:19,0:19:54.16:0,54,987	0/1:10,0:10:2.63:3,0,360	0/0:23,0:23:54.11:0,54,893	1/1:12,0:12:35.79:476,36,0	0/0:18,0:17:42.12:0,42,649	1/1:13,0:13:17:479,17,0	1/1:9,0:9:18.02:263,18,0	0/0:33,0:28:66.16:0,66,1136	0/0:15,0:13:39.13:0,39,826	1/1:5,13:16:36.10:512,36,0	1/1:1,17:18:2.30:35,2,0	1/1:22,0:17:0.54:400,1,0	0/0:20,0:20:53.76:0,54,977	0/1:1,15:15:0.15:0,0,0	1/1:22,0:21:35.23:539,35,0	1/1:10,0:10:7.81:33,8,0	1/1:2,15:16:45.12:649,45,0	1/1:5,0:5:11.91:178,12,0	1/1:15,0:12:30.10:456,30,0
chr10	89000472	.	A	ACAG	429.18	PASS	AB=0.867;AC=7;AF=0.125;AN=56;BaseQRankSum=4.976;DP=559;FS=19.854;HRun=0;HaplotypeScore=130.7345;InbreedingCoeff=0.4587;MQ=64.96;MQ0=18;MQRankSum=-3.736;QD=6.31;ReadPosRankSum=-5.226;VQSLOD=-0.3526;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:11,11:17:11.68:190,12,0	0/0:17,0:17:42.11:0,42,752	0/0:51,0:26:70.86:0,71,1104	0/0:84,0:36:55.88:0,56,965	0/0:23,0:23:53.76:0,54,924	0/0:14,0:13:32.61:0,33,462	0/0:13,0:13:33.02:0,33,504	0/0:23,0:21:63.19:0,63,1119	0/1:2,4:6:3.69:77,0,4	0/0:19,0:19:54.07:0,54,958	0/0:10,0:10:26.94:0,27,404	0/0:21,0:22:54.03:0,54,920	0/0:14,0:14:25.92:0,26,226	0/0:18,0:17:41.93:0,42,611	0/0:13,0:13:32.89:0,33,276	0/0:10,0:9:9.65:0,10,130	0/0:33,0:29:66.06:0,66,1107	0/0:15,0:13:39.05:0,39,680	0/1:15,0:13:33.84:34,0,204	0/0:18,0:18:2.89:0,3,31	0/0:19,0:16:8.92:0,9,202	0/0:21,0:21:56.63:0,57,937	0/0:16,0:15:0.02:0,0,0	0/0:21,0:20:36.03:0,36,333	1/1:3,6:9:11.88:241,12,0	0/1:16,0:15:21.48:21,0,235	0/0:5,0:5:11.99:0,12,106	0/0:11,0:11:2.60:0,3,190
chr10	89001405	.	CTGTG	C	1170.05	PASS	AB=0.824;AC=29;AF=0.580;AN=50;BaseQRankSum=1.820;DP=501;FS=8.963;HRun=0;HaplotypeScore=103.1434;InbreedingCoeff=0.3526;MQ=61.96;MQ0=14;MQRankSum=-1.958;QD=3.73;ReadPosRankSum=0.878;VQSLOD=1.2635;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:21:3.22:13,3,0	0/0:7,0:6:5.49:0,5,24	./.	./.	0/0:17,0:16:6.26:0,6,236	0/0:13,0:13:3.01:0,3,69	0/0:21,0:21:10.39:0,10,164	./.	1/1:8,0:13:9.01:83,9,0	0/0:16,0:19:5.54:0,6,25	0/0:8,0:9:5.49:0,5,25	0/1:15,1:17:22.12:22,0,341	1/1:9,2:11:6.02:89,6,0	0/0:16,0:16:4.57:0,5,203	1/1:12,4:16:1.03:42,1,0	1/1:17,5:22:12.04:184,12,0	0/1:15,2:24:69.12:69,0,106	0/0:13,0:14:2.53:0,3,12	0/0:15,0:15:1.82:0,2,5	1/1:12,0:18:4.25:31,4,0	1/1:28,2:27:9.02:120,9,0	1/1:8,5:13:3:46,3,0	0/1:16,1:19:23.27:37,0,23	1/1:20,7:28:5.61:218,6,0	1/1:15,0:21:9.48:85,9,0	1/1:20,2:22:6.02:89,6,0	1/1:17,0:24:16.27:152,16,0	1/1:10,2:12:3.01:46,3,0
chr10	89001466	.	C	CAT	3683.87	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-5.509;DP=459;FS=0.542;HRun=0;HaplotypeScore=74.1570;InbreedingCoeff=0.9922;MQ=70.06;MQ0=8;MQRankSum=-3.452;QD=32.03;ReadPosRankSum=2.777;VQSLOD=5.7892;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,19:27:48.16:813,48,0	0/0:7,0:7:18.06:0,18,240	0/0:30,0:26:69.68:0,70,891	0/0:18,0:9:27.06:0,27,342	0/0:17,0:17:48.16:0,48,639	0/0:14,0:14:39.13:0,39,519	0/0:16,0:15:42.11:0,42,525	0/0:24,0:24:48.14:0,48,625	1/1:7,9:16:30.10:501,30,0	0/0:23,0:23:51.16:0,51,666	0/0:14,0:14:33.09:0,33,413	0/0:12,0:12:33.09:0,33,423	0/0:11,0:11:27.09:0,27,357	0/0:14,0:14:27.07:0,27,343	0/0:13,0:13:27.09:0,27,359	0/0:17,0:17:48.16:0,48,632	0/0:21,0:20:47.71:0,48,591	0/0:10,0:10:21.02:0,21,260	1/1:0,8:8:21.02:308,21,0	1/1:7,18:25:45.15:779,45,0	0/0:12,0:11:21.06:0,21,264	0/0:10,0:10:17.87:0,18,223	0/0:16,0:16:36.10:0,36,462	0/0:19,0:19:45.15:0,45,597	1/1:2,18:20:39.13:659,39,0	0/0:18,0:18:51.17:0,51,676	1/1:6,13:19:36.59:624,37,0	0/0:8,0:8:21.05:0,21,263
chr10	89001619	.	T	TC	2438.01	PASS	AB=0.577;AC=12;AF=0.214;AN=56;BaseQRankSum=-0.770;DP=496;FS=1.507;HRun=8;HaplotypeScore=73.5970;InbreedingCoeff=0.7924;MQ=83.53;MQ0=0;MQRankSum=-0.795;QD=23.22;ReadPosRankSum=1.040;VQSLOD=4.3270;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:66.03:0,66,604	0/0:13,0:13:30.01:0,30,275	0/0:21,0:21:23.81:0,24,301	0/0:18,0:18:33.73:0,34,337	0/1:2,11:13:15.81:341,0,16	1/1:1,12:13:33.10:381,33,0	1/1:2,12:14:36.11:415,36,0	0/0:25,0:25:56.99:0,57,517	0/0:14,0:14:30:0,30,275	0/0:11,0:11:27.01:0,27,247	0/0:13,0:14:32.05:0,32,280	1/1:0,11:11:30.09:344,30,0	0/0:16,0:16:42.02:0,42,384	1/1:4,14:18:40:451,40,0	0/0:19,0:19:51.02:0,51,467	0/0:19,0:19:48.02:0,48,439	0/0:18,0:18:48.03:0,48,439	0/1:7,12:19:15.82:342,0,16	0/0:13,0:13:30.01:0,30,272	0/0:17,0:17:44.99:0,45,402	0/0:28,0:28:72.03:0,72,659	1/1:4,13:17:30.09:346,30,0	0/0:15,0:15:39.02:0,39,357	0/0:23,0:23:59.98:0,60,541	0/0:30,0:30:75.02:0,75,686	0/0:19,0:19:32.99:0,33,302	0/0:22,0:22:54.02:0,54,494	0/0:9,0:9:27.01:0,27,246
chr10	89002620	.	CA	C	5731.12	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=1.770;DP=695;FS=0.000;HRun=8;HaplotypeScore=88.3826;InbreedingCoeff=0.9973;MQ=81.23;MQ0=0;MQRankSum=-2.434;QD=24.39;ReadPosRankSum=-1.184;VQSLOD=4.6770;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,47:50:99:1246,129,0	1/1:2,9:11:21.03:203,21,0	0/0:23,1:22:28.08:0,28,579	0/0:20,0:20:45.15:0,45,483	0/0:4,0:31:72.22:0,72,405	0/0:2,0:24:60.38:0,60,307	0/0:2,0:27:60.38:0,60,307	0/0:40,0:40:99:0,99,1196	1/1:2,27:29:78.12:753,78,0	1/1:0,27:27:81.13:782,81,0	1/1:4,17:21:39.05:377,39,0	0/0:2,0:24:57.30:0,57,290	0/0:25,0:25:60.14:0,60,708	0/0:1,0:21:60.50:0,60,318	0/0:28,0:28:78.23:0,78,932	0/0:30,0:30:87.27:0,87,1051	1/1:0,18:18:51.08:493,51,0	0/0:1,0:11:15.91:0,16,119	1/1:2,17:19:48.06:459,48,0	1/1:1,17:18:45.07:434,45,0	0/0:36,0:36:96.29:0,96,1160	0/0:3,0:23:57.43:0,57,295	0/0:17,0:17:46.38:0,46,546	0/0:33,0:33:84.19:0,84,960	1/1:1,26:27:69.11:666,69,0	0/0:28,0:28:69.21:0,69,833	1/1:3,12:15:33.05:319,33,0	0/0:18,0:17:44.25:0,44,499
chr10	89003722	.	GAAGGAAGATT	G	12624.09	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=16.699;DP=638;FS=1.119;HRun=0;HaplotypeScore=200.1888;InbreedingCoeff=0.9984;MQ=83.89;MQ0=0;MQRankSum=-14.844;QD=71.73;ReadPosRankSum=0.035;VQSLOD=4.7355;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:57.19:1607,57,0	0/0:15,0:15:45.15:0,45,2311	0/0:29,0:29:78.22:0,78,2754	0/0:20,0:20:51.17:0,51,2383	0/0:20,0:20:57.20:0,57,2574	0/0:25,0:25:72.25:0,72,3767	0/0:17,0:17:51.17:0,51,2537	1/1:1,28:29:81.23:2081,81,0	1/1:1,24:25:63.22:2076,63,0	0/0:20,0:20:54.18:0,54,2440	0/0:16,0:16:45.14:0,45,2056	0/0:23,0:23:69.24:0,69,3278	0/0:32,0:32:87.30:0,87,4433	0/0:29,0:29:87.30:0,87,4476	0/0:25,0:25:72.25:0,72,3539	0/0:22,0:22:66.23:0,66,3288	0/0:26,0:26:72.25:0,72,3765	0/0:21,0:21:63.22:0,63,3166	1/1:3,16:19:48.14:1298,48,0	1/1:2,21:23:57.20:1668,57,0	0/0:25,0:25:72.25:0,72,3563	0/0:18,0:18:51.17:0,51,2308	0/0:19,0:19:54.18:0,54,2657	0/0:22,0:22:66.21:0,66,3246	1/1:1,31:32:90.31:2905,90,0	0/0:32,0:32:93.32:0,93,4596	1/1:1,14:15:30.10:988,30,0	0/0:6,0:6:18.06:0,18,882
chr10	89005151	.	CT	C	1764.85	PASS	AB=0.933;AC=9;AF=0.161;AN=56;BaseQRankSum=7.346;DP=561;FS=0.895;HRun=11;HaplotypeScore=63.9720;InbreedingCoeff=0.7568;MQ=69.23;MQ0=0;MQRankSum=-0.811;QD=14.47;ReadPosRankSum=-1.058;VQSLOD=3.7232;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,29:35:68.85:566,69,0	0/0:13,1:14:8.43:0,8,289	0/0:19,1:19:12.57:0,13,286	0/1:13,1:14:12.80:13,0,104	0/0:24,0:31:64.38:0,64,619	0/0:20,0:21:23.66:0,24,419	0/0:21,0:21:21.73:0,22,426	1/1:7,33:39:89.82:732,90,0	1/1:4,8:12:23.96:197,24,0	0/0:34,1:35:65.45:0,65,885	0/0:19,0:19:52.47:0,52,534	0/0:14,1:15:8.40:0,8,275	0/0:14,1:15:17.43:0,17,380	0/0:18,0:18:48.07:0,48,491	0/0:16,0:16:33.08:0,33,346	0/0:14,1:15:8.43:0,8,287	0/0:28,0:30:68.87:0,69,694	0/0:31,0:31:69.14:0,69,719	0/0:17,0:16:36.07:0,36,370	0/0:14,1:15:17.43:0,17,376	0/0:8,0:8:18.03:0,18,185	0/0:16,0:17:41.92:0,42,422	0/0:12,0:13:31.15:0,31,301	0/0:18,1:19:0.18:0,0,400	1/1:4,17:21:50.93:419,51,0	0/0:22,0:22:45.11:0,45,474	0/0:21,0:23:60.01:0,60,615	0/0:4,0:4:12.03:0,12,128
chr10	89005325	.	GCA	G	72.71	PASS	AB=0.546;AC=10;AF=0.179;AN=56;BaseQRankSum=4.847;DP=505;FS=5.396;HRun=0;HaplotypeScore=104.5980;InbreedingCoeff=0.6977;MQ=50.85;MQ0=5;MQRankSum=-4.409;QD=2.14;ReadPosRankSum=-1.925;VQSLOD=1.4540;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:5,11:16:0.05:0,0,0	0/0:8,0:8:24.04:0,24,401	0/0:39,2:15:44.63:0,45,698	0/0:52,0:26:76.96:0,77,1299	0/0:25,0:25:12.04:0,12,232	0/0:16,0:15:30.10:0,30,573	0/0:18,0:18:37.99:0,38,727	1/1:2,0:1:2.98:21,3,0	1/1:1,4:5:5.82:68,6,0	0/0:21,0:21:63.22:0,63,1230	0/0:13,0:13:36.12:0,36,694	0/0:11,1:12:17.52:0,18,287	0/0:22,0:22:65.88:0,66,1226	0/0:7,1:8:10.28:0,10,185	0/0:14,0:13:36.12:0,36,717	0/0:18,1:19:51.18:0,51,1034	0/0:29,1:30:68.49:0,68,1637	0/0:6,0:6:18.02:0,18,301	1/1:2,2:3:8.62:84,9,0	0/1:0,4:4:0.16:0,0,0	0/0:67,0:67:99:0,174,3389	0/0:11,0:11:3.01:0,3,53	0/0:11,0:11:33.11:0,33,669	0/0:44,0:44:99:0,111,2155	0/0:0,1:1:0.47:0,0,1	0/0:28,0:28:80.62:0,81,1611	1/1:1,2:3:3:25,3,0	0/0:4,0:4:12.04:0,12,231
chr10	89005327	.	ATGTGTGTGTGCCTGTGCCTGTGCATGTGTGTGCATGTGTGTGCATGTGTGTTTGTGTGCATG	A	529.32	PASS	AB=1.000;AC=13;AF=0.250;AN=52;BaseQRankSum=-2.571;DP=528;FS=0.000;HRun=0;HaplotypeScore=621.4337;InbreedingCoeff=0.6988;MQ=50.85;MQ0=3;MQRankSum=-2.321;QD=6.70;ReadPosRankSum=-1.012;VQSLOD=-0.6397;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:36.11:0,36,956	0/0:7,0:7:18.06:0,18,1456	0/0:39,0:15:18.05:0,18,377	0/0:50,0:25:37.69:0,38,890	1/1:4,21:25:0.47:1,0,0	1/1:16,0:15:8.90:356,9,0	1/1:18,0:18:12.02:232,12,0	0/0:7,0:6:12.04:0,12,308	0/0:5,0:5:6.84:0,7,212	0/0:23,0:23:57.19:0,57,4810	0/0:13,0:13:27.09:0,27,2370	./.	0/0:22,0:22:57.20:0,57,5886	1/1:8,0:8:3.88:27,4,0	0/0:14,0:14:39.13:0,39,3811	0/0:22,0:22:63.22:0,63,6377	0/0:32,0:32:82.14:0,82,7735	1/1:7,0:7:5.96:44,6,0	0/0:5,0:4:8.82:0,9,160	0/1:4,0:4:4.34:4,0,101	0/0:71,0:71:49.80:0,50,14740	./.	0/0:14,0:14:42.13:0,42,4389	0/0:43,0:44:99:0,102,7066	1/1:1,0:1:0.47:1,0,0	0/0:29,0:29:72.25:0,72,6035	0/0:7,0:7:11.35:0,11,446	0/0:5,0:5:12.04:0,12,1329
chr10	89005337	.	GCC	G	207.10	PASS	AB=0.750;AC=9;AF=0.167;AN=54;BaseQRankSum=4.844;DP=516;FS=2.396;HRun=2;HaplotypeScore=107.9855;InbreedingCoeff=0.7355;MQ=53.29;MQ0=1;MQRankSum=-5.631;QD=6.47;ReadPosRankSum=-1.759;VQSLOD=-0.2898;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,10:15:0.26:0,0,1	0/0:6,0:6:18.06:0,18,366	0/0:33,0:12:35.47:0,35,497	0/0:39,1:27:61.69:0,62,1001	0/0:23,0:23:6.02:0,6,113	0/0:14,0:14:24.55:0,25,459	0/0:14,0:14:27.01:0,27,442	1/1:7,2:8:11.98:106,12,0	1/1:2,3:5:5.71:60,6,0	0/0:25,0:25:72.25:0,72,1405	0/0:11,0:11:30.06:0,30,567	0/0:6,0:6:8.99:0,9,124	0/0:25,0:25:72.20:0,72,1371	0/0:7,0:7:8.94:0,9,101	0/0:17,0:17:48.14:0,48,899	0/0:23,0:23:66.23:0,66,1316	0/0:36,0:36:99:0,103,1941	0/0:4,1:5:12.04:0,12,234	1/1:4,1:5:10.39:126,10,0	0/1:4,2:6:0.16:0,0,1	0/0:75,1:76:99:0,184,3829	./.	0/0:15,0:15:45.15:0,45,891	0/0:45,0:45:99:0,120,2298	0/0:0,2:2:0.47:0,0,1	0/0:28,0:28:84.28:0,84,1638	1/1:6,1:7:3.07:47,3,0	0/0:4,0:4:12.04:0,12,244
chr10	89005347	.	GTGCA	G	938.45	PASS	AB=0.964;AC=14;AF=0.280;AN=50;BaseQRankSum=8.812;DP=536;FS=10.669;HRun=0;HaplotypeScore=124.9972;InbreedingCoeff=0.6624;MQ=51.79;MQ0=6;MQRankSum=-6.964;QD=10.54;ReadPosRankSum=-3.945;VQSLOD=1.2956;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:33.48:375,33,0	0/0:7,0:7:21.07:0,21,523	0/0:39,0:13:38.83:0,39,654	0/0:37,0:21:22.99:0,23,717	0/1:21,0:21:0:0,0,0	0/0:12,0:12:8.14:0,8,53	0/0:6,0:6:1.90:0,2,19	1/1:9,4:9:1.08:224,1,0	1/1:5,1:6:15:208,15,0	0/0:25,0:25:69.24:0,69,1763	0/0:11,0:11:30.10:0,30,777	./.	0/0:26,0:26:78.27:0,78,2010	0/1:7,0:7:0:0,0,0	0/0:19,0:19:53.68:0,54,1427	0/0:24,1:25:72.25:0,72,1863	0/0:39,0:39:99:0,111,2822	./.	0/1:5,1:5:11.43:90,0,11	1/1:4,4:8:3.57:33,4,0	0/0:80,0:80:99:0,220,5517	./.	0/0:17,0:17:48.16:0,48,1265	0/0:50,0:49:99:0,126,3064	0/1:2,0:2:0:0,0,0	0/0:30,0:30:90.31:0,90,2381	1/1:4,3:7:12.03:155,12,0	0/0:4,0:4:12.04:0,12,329
chr10	89005351	.	A	ATG	1386.23	PASS	AB=0.875;AC=16;AF=0.333;AN=48;BaseQRankSum=9.379;DP=555;FS=13.374;HRun=0;HaplotypeScore=112.0716;InbreedingCoeff=0.7242;MQ=51.27;MQ0=9;MQRankSum=-7.573;QD=14.59;ReadPosRankSum=-4.170;VQSLOD=1.6605;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,17:23:32.77:563,33,0	0/0:8,0:8:18.06:0,18,237	0/0:43,0:12:32.81:0,33,391	0/0:36,0:15:24.07:0,24,303	./.	1/1:12,0:12:8.61:107,9,0	1/1:6,0:6:3.01:33,3,0	0/1:10,5:9:20.97:166,0,21	1/1:4,5:9:20.92:331,21,0	0/0:24,0:24:69.16:0,69,906	0/0:10,0:10:30.10:0,30,394	./.	0/0:26,0:26:75.23:0,75,970	0/1:6,0:6:0:0,0,0	0/0:19,0:19:47.18:0,47,700	0/0:27,0:27:69.21:0,69,907	0/0:41,0:40:99:0,108,1400	./.	1/1:6,0:5:3.83:96,4,0	1/1:6,4:10:2.44:51,2,0	0/0:86,0:86:99:0,210,2724	./.	0/0:16,0:16:45.15:0,45,592	0/0:47,0:46:99:0,114,1476	0/0:0,2:2:0.47:0,0,1	0/0:31,0:31:93.30:0,93,1222	1/1:4,4:8:11.67:203,12,0	0/0:4,0:4:12.04:0,12,158
chr10	89005353	.	G	GTA	871.65	PASS	AB=1.000;AC=17;AF=0.327;AN=52;BaseQRankSum=9.597;DP=574;FS=11.078;HRun=0;HaplotypeScore=120.7370;InbreedingCoeff=0.4477;MQ=50.84;MQ0=11;MQRankSum=-7.534;QD=7.65;ReadPosRankSum=-2.751;VQSLOD=2.3253;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:4.19:336,0,4	0/0:7,0:7:21.04:0,21,297	0/0:44,0:11:33.08:0,33,464	0/0:35,0:13:29.95:0,30,406	./.	1/1:4,11:15:8.62:154,9,0	1/1:0,4:4:3.01:58,3,0	0/1:16,0:10:37.52:82,0,38	0/1:10,0:10:1.14:172,0,1	0/0:26,0:26:72.17:0,72,1083	0/0:12,0:12:33.10:0,33,484	1/1:3,6:9:2.94:18,3,0	0/0:27,0:27:78.25:0,78,1168	1/1:2,5:7:0.89:2,1,0	0/0:20,0:20:56.83:0,57,850	0/0:28,0:28:78.20:0,78,1128	0/0:40,0:39:99:0,111,1665	1/1:2,1:3:2.22:7,2,0	0/1:7,0:5:31.44:45,0,31	0/1:12,0:12:21.40:21,0,61	0/0:87,0:87:99:0,234,3398	./.	0/0:16,0:16:48.15:0,48,712	0/0:47,0:46:99:0,120,1785	0/0:2,0:2:0.47:0,0,1	0/0:32,0:32:93.32:0,93,1423	1/1:8,0:8:11.66:131,12,0	0/0:4,0:4:12.04:0,12,183
chr10	89005361	.	ATG	A	64.04	PASS	AB=1.000;AC=9;AF=0.173;AN=52;BaseQRankSum=5.168;DP=613;FS=9.628;HRun=0;HaplotypeScore=131.7794;InbreedingCoeff=0.7423;MQ=50.83;MQ0=14;MQRankSum=-4.932;QD=1.10;ReadPosRankSum=-3.540;VQSLOD=0.8613;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:44.66:0,45,759	0/0:8,0:8:24.08:0,24,411	0/0:43,0:10:24.01:0,24,376	0/0:41,0:17:15.74:0,16,456	0/1:21,0:21:0:0,0,0	1/1:9,7:16:11.97:110,12,0	./.	0/0:21,0:15:28.13:0,28,453	0/0:14,0:14:30.10:0,30,501	0/0:27,0:27:69.22:0,69,1158	0/0:14,0:13:36.12:0,36,622	1/1:4,5:9:2.96:19,3,0	0/0:32,0:32:87.30:0,87,1500	1/1:4,4:8:5.85:46,6,0	0/0:22,0:22:38.06:0,38,1061	0/0:27,0:27:78.26:0,78,1339	0/0:38,0:37:99:0,99,1734	1/1:4,0:4:2.74:12,3,0	0/0:5,0:2:4.83:0,5,58	0/0:13,0:13:17.65:0,18,307	0/0:91,0:91:99:0,252,4409	./.	0/0:15,0:15:45.15:0,45,789	0/0:47,0:46:99:0,111,1872	0/0:4,0:5:0.47:0,0,1	0/0:36,0:36:99:0,102,1732	0/0:11,0:11:21.04:0,21,363	0/0:4,0:4:12.04:0,12,210
chr10	89005387	.	A	ATG	3639.96	PASS	AB=0.604;AC=13;AF=0.250;AN=52;BaseQRankSum=-4.328;DP=701;FS=7.705;HRun=0;HaplotypeScore=136.8154;InbreedingCoeff=0.7935;MQ=53.78;MQ0=19;MQRankSum=-1.486;QD=25.10;ReadPosRankSum=-3.736;VQSLOD=3.0201;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:11,20:32:45.15:730,45,0	0/0:12,0:12:27.09:0,27,341	0/0:49,0:25:60.18:0,60,732	0/0:38,0:19:45.13:0,45,549	./.	0/0:1,0:18:20.34:0,20,96	0/0:0,0:7:10.90:0,11,55	0/1:9,19:23:11.58:837,0,12	1/1:4,17:21:51.16:843,51,0	0/0:26,0:26:69.21:0,69,860	0/0:20,0:19:48.15:0,48,605	0/0:0,0:14:4.66:0,5,18	0/0:37,0:37:93.28:0,93,1159	0/0:0,0:8:9.06:0,9,44	0/0:23,0:24:52.45:0,52,781	0/0:31,1:32:37.67:0,38,997	0/0:39,0:39:99:0,102,1273	0/0:1,0:9:4.66:0,5,34	1/1:7,10:11:24.08:398,24,0	1/1:1,19:21:23.66:398,24,0	0/0:95,0:95:99:0,220,2727	./.	0/0:20,0:20:51.16:0,51,643	0/0:41,0:40:87.28:0,87,1098	1/1:4,5:10:2.20:49,2,0	0/0:26,0:26:75.24:0,75,947	1/1:2,11:13:23.91:385,24,0	0/0:7,0:7:15.05:0,15,189
chr10	89005754	.	G	GA	5604.41	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-13.890;DP=766;FS=7.988;HRun=5;HaplotypeScore=82.9648;InbreedingCoeff=0.9998;MQ=89.09;MQ0=0;MQRankSum=-1.810;QD=33.16;ReadPosRankSum=2.743;VQSLOD=5.1876;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,55:56:99:1855,141,0	0/0:11,0:11:30.08:0,30,322	0/0:27,0:27:68.91:0,69,724	0/0:41,0:40:99:0,100,1014	0/0:28,0:28:69.16:0,69,732	0/0:22,0:22:66.17:0,66,708	0/0:34,0:34:96.18:0,96,1005	0/0:42,0:42:99:0,110,1143	1/1:0,23:23:57.19:750,57,0	0/0:33,0:33:96.23:0,96,1020	0/0:24,0:24:63.39:0,63,717	0/0:23,0:23:54.11:0,54,571	0/0:27,0:27:69.14:0,69,725	0/0:26,0:26:57.13:0,57,605	0/0:32,0:32:93.20:0,93,982	0/0:31,0:31:72.17:0,72,774	0/0:33,0:33:93.18:0,93,976	0/0:23,0:23:54.11:0,54,569	1/1:0,20:20:59.74:717,60,0	1/1:1,28:29:81.26:1059,81,0	0/0:19,0:19:51.13:0,51,548	0/0:21,0:21:44.20:0,44,481	0/0:28,0:28:81.20:0,81,870	0/0:36,0:36:99:0,102,1069	1/1:1,14:15:36.12:473,36,0	0/0:26,0:26:72.18:0,72,774	1/1:3,22:25:57.19:750,57,0	0/0:10,0:10:30.08:0,30,322
chr10	89006589	.	GGGTTT	G	4351.99	PASS	AB=0.998;AC=24;AF=0.429;AN=56;BaseQRankSum=4.977;DP=561;FS=5.791;HRun=0;HaplotypeScore=112.8372;InbreedingCoeff=0.5641;MQ=59.72;MQ0=20;MQRankSum=-4.612;QD=14.80;ReadPosRankSum=0.350;VQSLOD=4.1180;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:13:47.96:91,0,48	0/0:10,0:10:18.06:0,18,480	0/1:63,0:24:0.46:0,0,224	0/0:85,0:29:28.27:0,28,414	1/1:7,15:22:38.18:675,38,0	1/1:21,6:27:23.64:726,24,0	1/1:9,1:10:11.97:149,12,0	1/1:28,0:28:31.60:369,32,0	0/1:11,0:11:41.67:96,0,42	0/0:16,0:16:36.12:0,36,898	0/0:15,0:15:27.09:0,27,594	1/1:4,7:11:27.08:468,27,0	0/0:16,0:16:30.09:0,30,654	1/1:7,3:9:15.05:266,15,0	0/0:15,0:15:42.12:0,42,1071	0/0:16,0:16:39.13:0,39,954	0/0:9,0:9:18.06:0,18,371	1/1:7,5:12:27.09:454,27,0	1/1:22,0:22:8.49:86,8,0	0/1:22,0:22:99:181,0,127	0/0:8,0:8:9.03:0,9,184	1/1:10,9:19:15.50:521,16,0	0/0:18,0:18:39.13:0,39,892	0/0:28,0:28:47.95:0,48,1038	0/1:8,0:8:19.59:102,0,20	0/0:21,0:21:54.11:0,54,1235	0/1:13,0:13:46.94:167,0,47	0/0:9,0:9:15.05:0,15,356
chr10	89006606	.	G	GTTTTT	4690.57	PASS	AB=0.971;AC=23;AF=0.411;AN=56;BaseQRankSum=9.047;DP=624;FS=10.263;HRun=3;HaplotypeScore=137.7230;InbreedingCoeff=0.6109;MQ=54.38;MQ0=48;MQRankSum=-5.158;QD=20.39;ReadPosRankSum=0.071;VQSLOD=0.7042;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:7.03:56,7,0	0/0:7,0:7:18.06:0,18,322	0/0:104,0:25:3.54:0,4,247	0/0:109,0:24:32.40:0,32,418	1/1:25,0:25:10.63:404,11,0	0/1:24,5:29:0.54:1078,0,1	1/1:11,1:10:16.55:271,17,0	0/1:19,0:19:14.79:220,0,15	0/1:11,0:10:15.29:101,0,15	0/0:15,0:15:38.76:0,39,715	0/0:12,0:11:33.11:0,33,586	1/1:15,1:16:9.48:571,9,0	0/0:14,0:14:36.12:0,36,648	1/1:12,1:12:32.97:409,33,0	0/0:20,0:20:54.14:0,54,962	0/0:18,0:18:54.17:0,54,952	0/0:10,0:10:21.06:0,21,381	1/1:16,0:16:30.06:406,30,0	0/1:24,0:23:64.66:163,0,65	0/1:17,0:17:23.51:86,0,24	0/0:9,0:8:18.06:0,18,290	1/1:20,0:20:59.28:632,59,0	0/0:18,0:18:42.14:0,42,801	0/0:28,0:28:56.13:0,56,1000	1/1:6,0:6:11.13:118,11,0	0/0:21,0:22:63.15:0,63,1089	1/1:10,0:10:15.11:175,15,0	0/0:8,0:8:17.27:0,17,298
chr10	89006609	.	TGG	T	3233.06	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=9.074;DP=617;FS=3.387;HRun=2;HaplotypeScore=103.4820;InbreedingCoeff=0.7852;MQ=52.94;MQ0=48;MQRankSum=-5.945;QD=14.37;ReadPosRankSum=-0.858;VQSLOD=0.6219;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,2:12:22.11:204,22,0	0/0:7,0:7:18.05:0,18,322	0/0:102,0:24:8.39:0,8,292	0/0:107,0:22:40.23:0,40,518	0/1:27,0:26:37.28:230,0,37	0/1:30,0:30:14.87:370,0,15	1/1:11,0:9:5.28:57,5,0	1/1:18,3:21:35.30:460,35,0	1/1:12,0:11:24.48:201,24,0	0/0:15,0:15:26.06:0,26,647	0/0:12,0:11:33.11:0,33,529	1/1:16,0:16:5.51:205,6,0	0/0:14,0:14:39.13:0,39,632	1/1:11,2:12:21.77:143,22,0	0/0:22,0:22:57.35:0,57,952	0/0:18,0:18:54.15:0,54,860	0/0:10,0:10:21.06:0,21,360	1/1:16,0:16:3.34:166,3,0	1/1:16,0:15:31.66:248,32,0	1/1:15,1:16:34.78:328,35,0	0/0:7,0:7:18.05:0,18,276	1/1:20,0:20:58.23:394,58,0	0/0:18,0:18:23.23:0,23,689	0/0:25,0:25:32.01:0,32,841	1/1:6,0:6:13.48:192,13,0	0/0:24,0:24:71.77:0,72,1084	1/1:9,0:9:20.15:250,20,0	0/0:10,0:10:24.04:0,24,343
chr10	89006624	.	T	TG	387.89	PASS	AB=0.802;AC=7;AF=0.125;AN=56;BaseQRankSum=9.229;DP=602;FS=5.405;HRun=0;HaplotypeScore=107.9600;InbreedingCoeff=-0.1482;MQ=55.95;MQ0=39;MQRankSum=-2.014;QD=2.92;ReadPosRankSum=1.653;VQSLOD=2.9670;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:23.35:0,23,148	0/0:7,0:5:14.86:0,15,107	0/0:90,0:24:20.04:0,20,255	0/0:80,0:14:8.43:0,8,99	0/1:22,8:29:94.93:95,0,231	0/1:17,9:26:99:173,0,115	0/1:12,2:12:23:47,0,23	0/0:29,0:29:68.46:0,68,484	0/0:10,0:9:24:0,24,150	0/0:19,0:18:47.38:0,47,371	0/0:10,0:9:20.77:0,21,144	0/1:14,3:17:43.41:43,0,158	0/0:15,0:15:42.07:0,42,460	0/1:8,3:11:11.76:12,0,99	0/0:22,0:22:63.04:0,63,687	0/0:19,0:18:50.30:0,50,526	0/0:9,0:9:23.76:0,24,164	0/1:13,2:15:30.47:30,0,107	0/0:19,0:18:52.78:0,53,372	0/0:19,0:19:37.55:0,38,251	0/0:8,0:7:13.23:0,13,118	0/1:11,9:20:99:117,0,111	0/0:18,0:18:44.82:0,45,470	0/0:26,0:26:66.29:0,66,759	0/0:4,0:4:8.89:0,9,59	0/0:23,0:23:60:0,60,622	0/0:18,0:18:41.60:0,42,287	0/0:11,0:11:23.16:0,23,243
chr10	89006948	.	T	TGA	6197.24	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.331;DP=637;FS=0.336;HRun=0;HaplotypeScore=130.5844;InbreedingCoeff=0.9926;MQ=69.67;MQ0=1;MQRankSum=-4.883;QD=32.11;ReadPosRankSum=2.278;VQSLOD=7.0123;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:57.17:685,57,0	0/0:5,0:5:12.04:0,12,177	0/0:23,0:19:33.56:0,34,558	0/0:14,0:11:17.95:0,18,291	0/0:34,0:34:96.20:0,96,1281	0/0:22,0:22:54.18:0,54,794	0/0:26,0:26:66.22:0,66,971	1/1:44,0:43:99:1594,126,0	1/1:24,0:24:54.16:658,54,0	0/0:29,0:29:87.29:0,87,1313	0/0:20,0:20:55.40:0,55,771	0/0:21,0:21:51.16:0,51,722	0/0:22,0:22:54.14:0,54,738	0/0:11,0:11:30.10:0,30,421	0/0:20,0:20:57.18:0,57,847	0/0:26,0:26:72.22:0,72,1024	0/0:10,0:10:27.08:0,27,371	0/0:18,0:18:45.05:0,45,591	1/1:18,2:20:57.13:718,57,0	1/1:29,0:29:81.23:940,81,0	0/0:26,0:26:72.14:0,72,1018	0/0:29,0:29:84.22:0,84,1136	0/0:21,0:21:57.09:0,57,785	0/0:22,0:22:60.13:0,60,836	1/1:14,0:14:39.11:472,39,0	0/0:21,0:21:60.06:0,60,813	1/1:35,2:36:90.26:1131,90,0	0/0:20,0:20:60.20:0,60,874
chr10	89006949	.	G	GA	5720.99	PASS	AB=0.947;AC=15;AF=0.268;AN=56;BaseQRankSum=13.943;DP=644;FS=0.335;HRun=0;HaplotypeScore=120.6545;InbreedingCoeff=0.9101;MQ=68.81;MQ0=2;MQRankSum=-4.436;QD=26.99;ReadPosRankSum=2.481;VQSLOD=5.2063;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:60.03:681,60,0	0/0:6,0:6:11.78:0,12,93	0/0:22,0:18:36.08:0,36,404	0/1:16,0:11:8.92:9,0,135	0/0:37,0:37:47.99:0,48,382	0/0:22,0:22:46.82:0,47,252	0/0:27,0:27:59.72:0,60,336	1/1:1,43:43:99:1353,126,0	1/1:0,24:24:54.16:644,54,0	0/0:29,0:29:87.17:0,87,1038	0/0:20,0:20:52.29:0,52,642	0/0:20,0:20:43.24:0,43,265	0/0:21,0:22:53.96:0,54,539	0/0:10,0:11:17.61:0,18,86	0/0:20,0:20:57.08:0,57,659	0/0:24,0:26:64.75:0,65,779	0/0:8,0:10:16.75:0,17,274	0/0:18,0:18:33.81:0,34,167	1/1:2,18:20:57.09:643,57,0	1/1:0,29:29:80.96:888,81,0	0/0:25,0:26:72.02:0,72,801	0/0:29,0:29:66.16:0,66,316	0/0:18,0:21:46.59:0,47,519	0/0:23,0:23:60.02:0,60,705	1/1:0,13:13:39.12:463,39,0	0/0:21,0:22:56.98:0,57,597	1/1:3,35:37:89.88:1040,90,0	0/0:18,0:20:50.01:0,50,590
chr10	89006959	.	T	TG	10025.15	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=5.040;DP=654;FS=6.248;HRun=0;HaplotypeScore=108.1871;InbreedingCoeff=0.8539;MQ=61.03;MQ0=8;MQRankSum=-1.430;QD=24.57;ReadPosRankSum=5.892;VQSLOD=5.3650;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:65:704,65,0	0/0:6,0:6:14.84:0,15,125	0/0:28,0:15:26.91:0,27,305	0/0:21,0:12:25.06:0,25,234	1/1:5,31:36:38.82:842,39,0	1/1:2,21:23:44.55:575,45,0	1/1:2,24:26:51.03:652,51,0	1/1:45,0:44:99:1188,117,0	1/1:24,0:24:69.07:752,69,0	0/1:23,0:23:25.40:25,0,27	0/1:17,0:17:23.86:24,0,62	1/1:3,17:20:35.49:455,35,0	0/0:18,0:18:50.98:0,51,536	1/1:2,12:14:26.91:317,27,0	0/0:19,0:19:54.12:0,54,657	0/0:27,0:27:68.87:0,69,814	0/0:13,0:13:24.53:0,25,331	1/1:3,14:17:31.68:438,32,0	1/1:27,0:26:69:706,69,0	1/1:27,0:27:77.86:846,78,0	0/0:26,0:26:75.07:0,75,865	1/1:0,26:26:66.16:844,66,0	0/0:22,0:22:56.30:0,56,636	0/0:22,0:22:61.96:0,62,748	1/1:14,0:14:42.05:464,42,0	0/0:24,0:24:62.88:0,63,640	1/1:43,0:42:99:1193,116,0	0/0:20,0:20:52.37:0,52,624
chr10	89007946	.	C	CTCT	2427.48	PASS	AB=0.726;AC=6;AF=0.107;AN=56;BaseQRankSum=4.356;DP=615;FS=27.652;HRun=0;HaplotypeScore=104.0158;InbreedingCoeff=0.0478;MQ=48.49;MQ0=21;MQRankSum=-2.044;QD=20.40;ReadPosRankSum=-0.067;VQSLOD=1.6984;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,13:25:55.43:526,0,55	0/0:5,0:5:12.04:0,12,161	0/0:31,0:15:23.93:0,24,271	0/0:39,0:19:19.48:0,19,195	0/0:22,0:22:45.14:0,45,632	0/0:11,0:11:14.41:0,14,185	0/0:42,0:40:69.18:0,69,964	0/1:16,10:23:0.80:645,0,1	0/1:16,4:20:99:268,0,219	0/0:27,0:26:63.21:0,63,925	0/0:15,0:15:33.11:0,33,485	0/0:17,0:17:39.13:0,39,573	0/0:28,0:28:57.19:0,57,836	0/0:16,0:15:33.11:0,33,486	0/0:23,0:23:51.17:0,51,745	0/0:24,0:23:51.16:0,51,729	0/0:22,0:22:57.19:0,57,835	0/0:28,0:27:54.18:0,54,784	0/1:8,5:12:10.50:293,0,11	0/1:10,6:16:70.93:363,0,71	0/0:18,0:17:39.13:0,39,574	0/0:14,0:14:33.11:0,33,476	0/0:17,0:17:39.13:0,39,571	0/0:30,0:29:75.25:0,75,1097	0/0:19,0:18:19.08:0,19,180	0/0:26,0:25:57.19:0,57,834	0/1:8,6:16:99:458,0,103	0/0:21,0:20:51.14:0,51,750
chr10	89007959	.	TC	T	317.66	PASS	AB=0.778;AC=2;AF=0.036;AN=56;BaseQRankSum=3.427;DP=574;FS=3.465;HRun=2;HaplotypeScore=88.6004;InbreedingCoeff=0.0803;MQ=46.40;MQ0=34;MQRankSum=1.264;QD=9.93;ReadPosRankSum=-2.925;VQSLOD=0.5803;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:18:35.27:0,35,270	0/0:5,0:5:12.04:0,12,175	0/0:20,0:10:25.48:0,25,294	0/0:27,1:12:20.97:0,21,236	0/0:23,0:23:51.16:0,51,732	0/0:11,0:11:14.26:0,14,186	0/0:38,0:34:69.18:0,69,984	0/0:37,1:32:14.11:0,14,621	0/1:17,0:17:0.10:0,0,304	0/0:27,0:26:75.25:0,75,1119	0/0:14,0:14:36.12:0,36,539	0/0:19,0:18:45.15:0,45,653	0/0:22,0:21:63.21:0,63,934	0/0:14,0:13:36.12:0,36,538	0/0:23,0:23:51.17:0,51,757	0/0:22,0:21:54.17:0,54,786	0/0:21,0:21:57.19:0,57,849	0/0:24,0:22:54.18:0,54,800	0/0:10,0:9:20.05:0,20,137	0/0:16,0:14:4.68:0,5,132	0/0:16,0:13:39.13:0,39,584	0/0:13,0:13:36.12:0,36,531	0/0:17,0:17:42.14:0,42,620	0/0:30,0:27:75.25:0,75,1117	0/1:3,12:14:8.84:392,0,9	0/0:23,0:22:60.20:0,60,897	0/0:21,0:21:27.78:0,28,148	0/0:25,0:23:57.19:0,57,851
chr10	89007960	.	CCTTCT	C	401.70	PASS	AB=0.818;AC=4;AF=0.071;AN=56;BaseQRankSum=3.797;DP=576;FS=13.824;HRun=0;HaplotypeScore=124.4036;InbreedingCoeff=-0.0825;MQ=46.21;MQ0=38;MQRankSum=-3.698;QD=5.91;ReadPosRankSum=-1.675;VQSLOD=1.5269;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:17:28.35:0,28,759	0/0:5,0:5:12.04:0,12,318	0/1:20,0:10:26.79:27,0,168	0/0:29,0:12:6.76:0,7,199	0/0:22,0:22:45.15:0,45,1226	0/0:10,0:11:14.97:0,15,330	0/0:37,0:33:54.18:0,54,1274	0/0:38,0:32:75.26:0,75,1202	0/0:18,0:17:33.11:0,33,879	0/0:27,0:26:75.26:0,75,2201	0/0:14,0:14:33.11:0,33,975	0/0:19,0:18:42.14:0,42,1088	0/0:23,0:22:60.21:0,60,1677	0/0:14,0:13:36.12:0,36,1084	0/0:23,0:23:48.16:0,48,1385	0/0:22,0:21:48.03:0,48,1323	0/0:21,0:21:54.18:0,54,1518	0/0:24,0:22:48.16:0,48,1237	0/1:9,2:9:99:102,0,288	0/1:8,6:13:99:111,0,299	0/0:16,0:13:36.12:0,36,924	0/0:13,0:13:36.12:0,36,984	0/0:17,0:17:42.14:0,42,966	0/0:31,0:27:69.23:0,69,1906	0/0:15,0:14:33.01:0,33,520	0/0:23,0:22:57.18:0,57,1634	0/1:13,9:22:99:271,0,428	0/0:25,0:23:57.19:0,57,1597
chr10	89008031	.	T	TTC	325.18	PASS	AB=0.948;AC=7;AF=0.140;AN=50;BaseQRankSum=5.134;DP=399;FS=10.058;HRun=0;HaplotypeScore=62.9318;InbreedingCoeff=0.0008;MQ=25.49;MQ0=119;MQRankSum=-1.736;QD=2.96;ReadPosRankSum=-0.667;VQSLOD=0.4799;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:4:3.01:34,3,0	0/0:6,0:6:18.06:0,18,249	./.	./.	0/0:21,0:21:17.93:0,18,258	0/0:7,0:6:3.01:0,3,43	./.	0/0:16,0:4:12.04:0,12,169	0/0:13,1:11:20.90:0,21,277	0/0:17,0:16:48.16:0,48,683	0/0:8,0:8:12.04:0,12,170	0/0:12,0:10:12.04:0,12,172	0/0:12,0:11:12.04:0,12,172	0/0:9,0:8:6.02:0,6,84	0/0:15,0:15:27.09:0,27,387	0/0:11,0:11:20.88:0,21,301	0/0:20,0:12:6.02:0,6,86	0/1:20,1:13:97.82:98,0,135	0/0:9,0:8:24.08:0,24,335	0/1:15,0:13:11.89:12,0,286	0/0:11,0:4:4.26:0,4,83	0/0:5,0:5:9.03:0,9,129	0/0:8,0:8:15.05:0,15,215	0/1:23,1:12:30.94:90,0,31	0/1:15,4:16:99:183,0,308	0/0:13,0:13:36.12:0,36,511	0/1:20,0:20:28.33:28,0,429	0/0:10,0:7:9.03:0,9,129
chr10	89008057	.	CT	C	317.95	PASS	AB=0.792;AC=6;AF=0.120;AN=50;BaseQRankSum=2.958;DP=344;FS=0.000;HRun=2;HaplotypeScore=50.7806;InbreedingCoeff=0.3180;MQ=24.12;MQ0=120;MQRankSum=-0.315;QD=8.37;ReadPosRankSum=-1.573;VQSLOD=0.3958;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:4:6.02:0,6,86	0/0:5,0:5:12.04:0,12,179	./.	./.	0/0:17,0:17:15.05:0,15,213	0/0:5,0:3:3.01:0,3,45	0/0:8,0:4:3.01:0,3,38	./.	0/0:11,0:8:15.05:0,15,224	0/0:15,0:15:42.12:0,42,598	0/0:8,0:8:12.04:0,12,166	0/0:10,0:8:9.03:0,9,131	0/0:12,0:12:6.02:0,6,90	0/0:5,0:5:3.01:0,3,45	0/0:12,0:12:27.09:0,27,395	0/0:9,0:9:15.05:0,15,213	0/0:17,1:10:6.02:0,6,90	0/0:20,0:11:23.44:0,23,307	1/1:1,1:2:6.01:62,6,0	1/1:4,6:10:21.96:239,22,0	0/0:9,0:5:5.97:0,6,64	0/0:10,0:10:15.05:0,15,221	0/0:7,0:7:9.03:0,9,131	0/0:23,0:11:12.04:0,12,169	0/1:15,3:16:73.17:73,0,425	0/0:15,0:15:42.13:0,42,610	0/1:5,3:8:24.97:67,0,25	0/0:6,0:3:6.02:0,6,90
chr10	89008064	.	C	CTCT	849.42	PASS	AB=0.972;AC=11;AF=0.239;AN=46;BaseQRankSum=3.797;DP=334;FS=0.000;HRun=0;HaplotypeScore=55.5758;InbreedingCoeff=0.3496;MQ=23.96;MQ0=120;MQRankSum=-1.362;QD=9.23;ReadPosRankSum=0.165;VQSLOD=2.6534;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:4:2.89:55,3,0	0/0:5,0:5:12.04:0,12,183	./.	./.	0/0:16,0:17:6.02:0,6,92	0/0:3,0:2:3.01:0,3,46	./.	./.	1/1:9,1:8:11.93:215,12,0	0/0:17,0:16:33.10:0,33,482	0/0:10,0:10:3.01:0,3,33	0/0:8,0:7:8.99:0,9,112	0/0:11,0:11:6.02:0,6,92	0/0:5,0:5:3.01:0,3,46	0/0:12,0:12:18.06:0,18,276	0/0:8,0:8:5.93:0,6,92	0/0:18,0:10:6.02:0,6,92	0/1:21,0:11:24.96:25,0,80	./.	1/1:9,0:9:13.87:90,14,0	0/0:7,0:3:2.93:0,3,46	0/0:10,0:10:12.04:0,12,184	0/0:6,0:6:9.03:0,9,138	0/1:20,0:11:33.71:34,0,36	1/1:8,8:14:22.76:538,23,0	0/0:14,0:14:30.10:0,30,443	0/1:8,0:7:26.10:36,0,26	0/0:5,0:3:6.02:0,6,92
chr10	89008071	.	TCTC	T	106.91	PASS	AB=1.000;AC=7;AF=0.152;AN=46;BaseQRankSum=4.213;DP=324;FS=0.000;HRun=0;HaplotypeScore=55.0204;InbreedingCoeff=0.2350;MQ=23.47;MQ0=123;MQRankSum=-2.447;QD=2.14;ReadPosRankSum=-2.240;VQSLOD=1.0584;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,1:4:8.30:59,8,0	0/0:4,0:4:12.04:0,12,275	./.	./.	0/0:15,0:14:5.94:0,6,137	0/0:4,0:3:5.98:0,6,89	./.	./.	1/1:4,4:6:11.98:118,12,0	0/0:13,0:12:33.10:0,33,686	0/0:12,0:12:3.01:0,3,67	0/0:9,0:7:8.99:0,9,144	0/0:12,0:12:8.63:0,9,147	0/0:5,0:5:2.94:0,3,69	0/0:14,0:14:21.07:0,21,439	0/0:7,0:7:5.87:0,6,123	0/0:16,0:9:8.92:0,9,139	0/1:21,0:11:22.63:23,0,141	./.	0/1:8,0:8:4.45:4,0,42	0/0:7,0:3:2.93:0,3,55	0/0:9,0:9:12.04:0,12,275	0/0:7,0:7:9.03:0,9,190	0/0:23,0:12:6.05:0,6,97	0/0:15,0:13:6.94:0,7,203	0/0:10,0:10:30.10:0,30,690	0/1:7,0:6:22.98:23,0,26	0/0:5,0:3:6.02:0,6,125
chr10	89008078	.	C	CT	232.45	PASS	AB=0.962;AC=8;AF=0.167;AN=48;BaseQRankSum=5.103;DP=306;FS=0.000;HRun=2;HaplotypeScore=46.4669;InbreedingCoeff=0.3732;MQ=23.43;MQ0=114;MQRankSum=-1.211;QD=4.39;ReadPosRankSum=0.213;VQSLOD=0.3243;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,1:3:8.98:103,9,0	0/0:4,0:4:12.04:0,12,156	./.	./.	0/0:17,0:16:5.55:0,6,77	0/0:4,0:3:6.02:0,6,78	./.	./.	1/1:6,0:5:12.03:142,12,0	0/0:11,0:10:24.08:0,24,312	0/0:12,0:12:6.02:0,6,73	0/0:7,0:6:6.02:0,6,75	0/0:11,0:11:15.02:0,15,170	0/0:5,0:4:2.92:0,3,39	0/0:13,0:13:24.08:0,24,303	0/0:6,0:6:5.87:0,6,75	0/0:14,0:9:9.02:0,9,100	0/0:17,1:9:7.85:0,8,107	0/0:2,0:1:2.92:0,3,17	1/1:4,1:6:11.14:53,11,0	0/0:7,0:3:3.01:0,3,35	0/0:10,0:10:12.04:0,12,155	0/0:7,0:7:12.04:0,12,146	0/1:21,2:13:39.05:39,0,99	0/1:11,0:12:28.65:29,0,127	0/0:15,0:13:39.07:0,39,472	0/0:3,0:3:3.44:0,3,21	0/0:5,0:3:6.02:0,6,74
chr10	89008160	.	C	CTT	138.66	PASS	AC=4;AF=0.133;AN=30;BaseQRankSum=-1.901;DP=104;FS=5.464;HRun=2;HaplotypeScore=17.2119;InbreedingCoeff=0.2979;MQ=18.81;MQ0=35;MQRankSum=-0.261;QD=9.90;ReadPosRankSum=2.571;VQSLOD=0.9157;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:0.47:0,0,2	0/0:2,0:1:0:0,0,0	./.	./.	0/0:10,0:6:10.37:0,10,68	./.	0/0:6,0:1:3:0,3,26	./.	./.	0/0:11,0:3:8.96:0,9,75	0/0:7,0:7:3:0,3,26	./.	0/0:3,0:2:2.94:0,3,18	0/0:2,0:1:2.98:0,3,21	0/0:9,0:8:2.90:0,3,16	0/0:3,0:1:3:0,3,28	0/0:3,0:3:4.55:0,5,28	./.	./.	./.	./.	0/0:11,0:1:3:0,3,26	0/0:7,0:3:3.01:0,3,42	./.	./.	1/1:5,6:6:12.04:217,12,0	./.	1/1:3,0:1:1.25:3,1,0
chr10	89008347	.	C	CTCT	262.58	PASS	AB=1.000;AC=13;AF=0.295;AN=44;BaseQRankSum=4.748;DP=288;FS=0.000;HRun=0;HaplotypeScore=38.3093;InbreedingCoeff=0.5423;MQ=23.07;MQ0=119;MQRankSum=-1.806;QD=5.97;ReadPosRankSum=-1.121;VQSLOD=1.6261;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,3:2:6.02:84,6,0	0/0:3,0:3:3.01:0,3,46	./.	./.	0/0:15,0:15:15.05:0,15,229	0/0:5,0:4:6.02:0,6,92	0/0:9,0:6:9.03:0,9,129	1/1:4,0:1:2.99:24,3,0	1/1:3,1:3:6.02:80,6,0	0/0:8,0:6:18.06:0,18,276	0/0:12,0:12:18.06:0,18,275	0/1:10,0:8:15.13:15,0,40	0/0:11,0:10:21.07:0,21,307	0/0:11,0:10:21.07:0,21,310	0/0:15,0:12:8.98:0,9,138	0/0:9,0:6:15.05:0,15,230	./.	./.	1/1:1,0:1:0.47:1,0,0	1/1:5,1:5:5.69:65,6,0	0/0:5,0:1:3.01:0,3,46	0/0:13,0:12:18.06:0,18,275	0/0:8,0:8:9.03:0,9,138	0/0:14,0:5:3.01:0,3,46	1/1:5,3:7:6.02:128,6,0	0/0:25,0:16:44.94:0,45,644	./.	./.
chr10	89008454	.	T	TC	1561.03	PASS	AB=0.961;AC=21;AF=0.477;AN=44;BaseQRankSum=4.299;DP=447;FS=56.731;HRun=0;HaplotypeScore=39.7899;InbreedingCoeff=-0.0370;MQ=26.03;MQ0=186;MQRankSum=-3.979;QD=5.64;ReadPosRankSum=-4.291;VQSLOD=0.9457;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:6:26.61:121,0,27	./.	./.	./.	0/1:19,0:7:26.29:116,0,26	0/1:9,0:5:33.34:33,0,63	1/1:15,0:3:9.02:113,9,0	./.	./.	0/1:30,0:13:92.94:93,0,226	0/1:9,0:6:22.46:75,0,22	1/1:12,0:6:8.76:96,9,0	0/0:24,0:17:33.17:0,33,365	1/1:13,0:4:9.03:127,9,0	0/1:24,0:16:1.44:1,0,349	0/0:25,0:17:30.51:0,31,422	0/1:19,6:12:50.86:205,0,51	0/1:13,1:7:16.19:114,0,16	./.	1/1:7,0:3:3.01:44,3,0	0/0:18,0:6:8.98:0,9,41	0/1:22,1:10:8.04:294,0,8	0/0:22,0:11:20.80:0,21,278	0/0:30,0:15:23.10:0,23,281	1/1:8,0:5:9.03:127,9,0	0/1:41,0:15:33.01:33,0,430	0/1:12,1:9:26.64:119,0,27	0/0:21,0:10:27.09:0,27,368
chr10	89008501	.	TC	T	852.72	PASS	AB=0.927;AC=28;AF=0.519;AN=54;BaseQRankSum=2.806;DP=318;FS=9.198;HRun=10;HaplotypeScore=40.9839;InbreedingCoeff=0.2154;MQ=55.69;MQ0=42;MQRankSum=0.102;QD=3.93;ReadPosRankSum=1.757;VQSLOD=-0.4789;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:4:0:0,0,0	0/0:4,0:4:6.02:0,6,66	0/1:29,1:7:13.53:14,0,52	0/1:33,0:15:15.97:16,0,170	1/1:1,3:3:6:52,6,0	1/1:8,2:9:14.97:124,15,0	1/1:1,4:5:5.99:52,6,0	1/1:8,0:3:2.02:6,2,0	0/0:7,0:5:0.47:0,0,1	0/1:4,1:4:19.68:20,0,21	0/0:11,0:11:1.05:0,1,238	1/1:3,7:9:18:156,18,0	0/0:14,0:13:14.78:0,15,145	1/1:2,9:11:20.99:182,21,0	0/1:23,3:24:26.55:27,0,338	0/0:16,0:15:0.59:0,1,179	0/1:9,1:8:10.72:11,0,117	1/1:4,2:6:8.54:74,9,0	1/1:8,0:6:10.63:34,11,0	1/1:9,0:9:11.09:34,11,0	0/1:7,1:8:7.95:8,0,147	1/1:4,9:12:23.58:178,24,0	0/1:9,1:9:8.03:8,0,136	0/0:10,0:8:18.05:0,18,198	./.	0/0:17,0:15:29.94:0,30,304	0/1:10,0:10:3.46:23,0,3	0/0:13,0:11:3.01:0,3,33
chr10	89008509	.	CCCT	C	700.01	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=1.331;DP=322;FS=2.808;HRun=0;HaplotypeScore=53.0550;InbreedingCoeff=0.5698;MQ=62.03;MQ0=29;MQRankSum=-0.438;QD=8.86;ReadPosRankSum=2.385;VQSLOD=2.6208;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:3:0:0,0,0	0/0:3,0:3:6.02:0,6,120	0/0:34,0:11:32.17:0,32,285	0/1:34,0:17:7.64:8,0,398	0/0:6,0:6:8.74:0,9,62	0/1:5,0:5:8.77:9,0,73	0/0:12,0:12:26.82:0,27,226	1/1:6,0:6:3.61:38,4,0	0/0:7,0:5:0.47:0,0,1	0/0:9,0:8:18.02:0,18,209	0/0:11,0:11:29.76:0,30,527	0/0:9,0:9:20.96:0,21,169	0/0:10,0:10:20.79:0,21,309	0/0:15,0:15:32.96:0,33,300	0/0:29,0:27:62.45:0,62,902	0/0:14,0:13:29.99:0,30,405	0/0:13,0:11:26.98:0,27,388	0/0:4,0:4:12.01:0,12,116	1/1:0,6:6:18.03:255,18,0	1/1:7,2:9:18.04:258,18,0	0/0:11,0:11:30.02:0,30,453	0/0:12,0:12:7.95:0,8,183	0/0:9,0:9:18.04:0,18,277	0/0:12,0:11:27.01:0,27,426	1/1:5,0:5:2.99:23,3,0	0/0:13,0:13:36.11:0,36,639	1/1:8,3:11:1.23:258,1,0	0/0:6,0:6:3.01:0,3,33
chr10	89008735	.	G	GA	3799.89	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.226;DP=651;FS=7.968;HRun=9;HaplotypeScore=75.0967;InbreedingCoeff=0.9796;MQ=83.84;MQ0=0;MQRankSum=0.103;QD=23.60;ReadPosRankSum=-2.219;VQSLOD=3.4976;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,23:29:66.01:711,66,0	0/0:5,0:5:15:0,15,130	0/0:22,0:24:11.50:0,11,257	0/0:18,0:18:21.40:0,21,240	0/0:30,0:31:70.99:0,71,605	0/0:25,0:25:68.97:0,69,599	0/0:36,0:36:98.97:0,99,859	1/1:6,4:27:61.05:368,61,0	1/1:4,14:18:16.06:405,16,0	0/0:32,0:32:83.88:0,84,729	0/0:20,0:21:56.02:0,56,475	0/0:14,0:14:35.96:0,36,306	0/0:25,0:26:62.02:0,62,527	0/0:26,0:26:65.95:0,66,569	0/0:36,0:37:99:0,101,858	0/0:22,0:22:56.99:0,57,495	0/0:19,0:19:53.99:0,54,469	0/0:11,0:12:35.03:0,35,292	1/1:5,15:20:48.13:530,48,0	1/1:4,11:15:30.08:332,30,0	0/0:23,0:23:56.99:0,57,495	0/0:25,0:25:47.95:0,48,416	0/0:29,0:29:65.95:0,66,565	0/0:26,0:26:74.98:0,75,651	1/1:4,16:20:22.05:458,22,0	0/0:28,0:29:74:0,74,627	1/1:0,32:32:90.24:996,90,0	0/0:9,0:10:10.64:0,11,196
chr10	89011115	.	C	CTG	1109.86	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=5.573;DP=879;FS=8.559;HRun=0;HaplotypeScore=155.4683;InbreedingCoeff=0.5753;MQ=51.58;MQ0=28;MQRankSum=0.449;QD=6.24;ReadPosRankSum=-0.526;VQSLOD=2.8426;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:31.55:0,32,251	0/0:12,0:12:29.09:0,29,237	0/0:35,0:9:8.98:0,9,77	0/0:71,0:12:21.02:0,21,197	0/0:33,0:34:35.58:0,36,275	0/0:26,0:25:33.14:0,33,283	0/0:27,0:28:34.66:0,35,303	0/0:33,0:33:41.29:0,41,520	0/0:38,0:38:38.33:0,38,339	0/0:24,0:24:67.36:0,67,663	0/0:24,0:24:60.06:0,60,644	0/1:28,0:28:17.04:17,0,71	0/0:23,0:23:39.95:0,40,463	0/0:34,0:37:4.64:0,5,196	0/0:54,0:54:99:0,156,1543	0/0:23,0:23:62.81:0,63,608	0/0:43,0:43:99:0,120,1143	0/0:11,0:10:23.84:0,24,175	1/1:8,1:20:41.87:383,42,0	1/1:6,25:31:12.45:303,12,0	0/0:46,0:44:57.74:0,58,703	0/1:34,0:35:2.79:3,0,191	0/0:32,0:30:68.57:0,69,569	0/1:32,0:32:99:154,0,311	0/0:27,0:26:33.27:0,33,263	0/0:21,0:20:13.86:0,14,388	1/1:5,22:28:12.36:399,12,0	0/0:17,0:14:14.24:0,14,289
chr10	89011117	.	G	GTCTC	4106.25	PASS	AB=0.890;AC=16;AF=0.286;AN=56;BaseQRankSum=3.060;DP=872;FS=8.591;HRun=0;HaplotypeScore=170.0163;InbreedingCoeff=0.6493;MQ=51.38;MQ0=27;MQRankSum=1.952;QD=14.67;ReadPosRankSum=-5.056;VQSLOD=1.3772;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:31.07:0,31,551	0/0:11,0:11:29.97:0,30,460	0/0:34,0:9:20.59:0,21,260	0/0:70,0:11:21.07:0,21,374	1/1:33,0:33:36.09:533,36,0	1/1:27,0:25:43.10:606,43,0	1/1:29,0:28:50:649,50,0	0/1:33,0:33:18.55:162,0,19	0/0:38,0:38:40.13:0,40,677	0/0:24,0:24:66.69:0,67,1140	0/0:25,0:25:60.12:0,60,1027	0/1:6,21:28:57.77:270,0,58	0/0:22,0:23:60.12:0,60,918	1/1:33,1:34:54.08:745,54,0	0/0:54,0:54:99:0,152,2638	0/0:24,0:24:66.11:0,66,1064	0/0:43,0:43:99:0,123,2000	1/1:13,0:12:31.82:388,32,0	0/1:20,0:19:27.79:28,0,71	0/0:34,0:32:24.15:0,24,184	0/0:45,0:43:80.31:0,80,1372	1/1:32,2:35:44.06:606,44,0	0/0:31,0:29:72.22:0,72,1155	0/0:31,0:31:64.44:0,64,946	0/1:28,0:27:99:120,0,379	0/0:21,0:20:34.65:0,35,789	0/0:28,0:27:23.19:0,23,170	0/0:17,0:14:33.43:0,33,484
chr10	89011119	.	GTCTCTCTCTCTCTCTC	G	599.23	PASS	AB=0.679;AC=3;AF=0.058;AN=52;BaseQRankSum=3.076;DP=876;FS=10.636;HRun=0;HaplotypeScore=319.1575;InbreedingCoeff=0.6068;MQ=50.90;MQ0=28;MQRankSum=-3.965;QD=7.99;ReadPosRankSum=2.464;VQSLOD=0.7365;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,1:38:12.94:169,0,13	0/0:11,0:11:15.01:0,15,648	./.	./.	0/0:33,0:33:9.97:0,10,261	0/0:27,0:25:36.12:0,36,1350	0/0:28,0:27:30.96:0,31,716	0/0:39,0:39:35.91:0,36,1030	1/1:13,23:37:11.68:529,12,0	0/0:23,0:25:60.17:0,60,2923	0/0:20,0:24:48.16:0,48,3060	0/0:26,0:29:27.09:0,27,1392	0/0:23,0:23:45.15:0,45,2304	0/0:35,0:34:32.97:0,33,909	0/0:46,0:53:99:0,114,6620	0/0:18,0:23:45.15:0,45,2507	0/0:37,0:41:78.23:0,78,4286	0/0:14,0:13:21.07:0,21,487	0/0:21,0:20:27.06:0,27,1062	0/0:36,0:34:36.59:0,37,1798	0/0:44,0:45:81.28:0,81,4255	0/0:35,0:37:38.60:0,39,897	0/0:27,0:26:42.14:0,42,2189	0/0:22,0:31:63.22:0,63,3360	0/0:27,0:26:29.83:0,30,1051	0/0:17,0:21:46.40:0,46,2519	0/0:27,0:26:36.12:0,36,1840	0/0:15,0:15:27.09:0,27,1526
chr10	89011397	.	GGTACACGA	G	9120.59	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.823;DP=743;FS=1.214;HRun=0;HaplotypeScore=196.9694;InbreedingCoeff=0.9994;MQ=87.77;MQ0=0;MQRankSum=-15.689;QD=53.65;ReadPosRankSum=-0.304;VQSLOD=4.7909;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,22:29:36.12:943,36,0	0/0:11,0:11:27.05:0,27,1036	0/0:38,0:38:99:0,102,3958	0/0:25,0:25:60.21:0,60,2183	0/0:21,0:21:48.16:0,48,2077	0/0:14,0:14:42.14:0,42,1783	0/0:31,0:31:78.27:0,78,3272	1/1:6,17:23:45.55:1239,46,0	1/1:4,26:30:69.24:1897,69,0	0/0:25,0:25:72.25:0,72,3123	0/0:18,0:18:45.15:0,45,1905	0/0:37,0:37:99:0,108,4576	0/0:31,0:31:78.27:0,78,3369	0/0:34,0:34:99:0,99,4045	0/0:33,0:33:96.33:0,96,4122	0/0:27,0:27:69.20:0,69,2755	0/0:31,0:30:81.28:0,81,3472	0/0:24,0:24:72.25:0,72,3040	1/1:7,14:21:42.13:1039,42,0	1/1:3,17:20:42.14:1155,42,0	0/0:50,0:50:99:0,129,5336	0/0:20,0:20:42.14:0,42,1653	0/0:22,0:22:63.17:0,63,2525	0/0:49,0:48:99:0,132,5506	1/1:4,19:23:48.16:1282,48,0	0/0:23,0:23:63.22:0,63,2640	1/1:1,23:24:57.20:1566,57,0	0/0:9,0:9:24.08:0,24,1035
chr10	89012203	.	A	AT	4506.78	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=6.623;DP=627;FS=6.229;HRun=9;HaplotypeScore=80.6431;InbreedingCoeff=0.9332;MQ=76.36;MQ0=0;MQRankSum=-0.329;QD=23.60;ReadPosRankSum=1.349;VQSLOD=5.6772;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:80.97:0,81,703	0/0:7,0:7:18:0,18,156	0/0:14,0:16:17.51:0,18,175	0/1:15,0:15:2.64:3,0,160	1/1:3,29:33:90.01:955,90,0	1/1:5,26:31:52.16:804,52,0	1/1:4,15:19:16.06:405,16,0	0/0:25,0:25:59.94:0,60,512	0/0:20,0:20:47.97:0,48,416	0/0:23,0:23:53.98:0,54,469	0/0:21,0:21:56.95:0,57,490	1/1:4,17:21:51.14:564,51,0	0/0:25,0:25:65.98:0,66,573	1/1:5,26:31:66.18:730,66,0	0/0:21,0:21:62.99:0,63,547	0/0:16,0:16:41.99:0,42,365	0/0:31,0:31:74.97:0,75,651	1/1:2,15:17:26.52:416,27,0	0/0:23,0:23:59.96:0,60,514	0/0:26,0:27:74:0,74,627	0/0:23,0:23:65.99:0,66,573	1/1:4,20:24:57.15:630,57,0	0/0:28,0:28:77.96:0,78,672	0/0:23,0:23:50.97:0,51,443	0/0:20,0:20:47.96:0,48,415	0/0:25,0:25:62.98:0,63,547	0/0:23,0:24:62.02:0,62,527	0/0:6,0:6:18:0,18,156
chr10	89017946	.	G	GT	723.50	PASS	AB=0.841;AC=5;AF=0.089;AN=56;BaseQRankSum=7.411;DP=758;FS=4.430;HRun=2;HaplotypeScore=135.6736;InbreedingCoeff=-0.1064;MQ=54.00;MQ0=13;MQRankSum=-7.544;QD=4.96;ReadPosRankSum=1.398;VQSLOD=0.7424;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:45:56.17:0,56,622	0/0:8,0:8:24.05:0,24,274	0/0:37,0:16:26.10:0,26,353	0/0:39,0:20:38.25:0,38,443	0/0:29,0:29:7.38:0,7,424	0/0:32,0:32:1.18:0,1,94	0/0:30,0:30:41.58:0,42,407	0/0:33,0:31:84.16:0,84,952	0/1:25,0:25:3.27:3,0,230	0/0:27,0:27:78.24:0,78,956	0/0:18,0:18:51.14:0,51,617	0/0:25,0:25:17.01:0,17,153	0/0:23,0:23:66.19:0,66,802	0/0:22,0:22:13.19:0,13,57	0/0:24,0:24:72.21:0,72,880	0/0:33,0:33:96.28:0,96,1176	0/0:28,0:28:82.48:0,82,991	0/0:20,0:20:20.68:0,21,208	0/1:27,8:33:99:137,0,618	0/1:12,11:21:99:267,0,244	0/0:25,0:24:72.21:0,72,879	0/1:23,0:23:13.80:14,0,98	0/0:15,0:15:45.14:0,45,557	0/0:35,0:35:99:0,102,1250	0/0:22,0:22:11.61:0,12,108	0/0:33,0:33:90.26:0,90,1100	0/1:24,16:40:99:412,0,443	0/0:6,0:6:18.06:0,18,223
chr10	89017950	.	G	GTTGGTTGGTTGGTTGGT	16336.95	PASS	AB=0.813;AC=26;AF=0.464;AN=56;BaseQRankSum=2.331;DP=800;FS=18.825;HRun=0;HaplotypeScore=295.7098;InbreedingCoeff=0.7970;MQ=57.53;MQ0=13;MQRankSum=-12.767;QD=36.63;ReadPosRankSum=-0.527;VQSLOD=2.6399;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:49:99:2862,112,0	0/0:7,0:7:18.06:0,18,404	0/0:37,0:19:29.46:0,29,477	0/0:41,0:23:3.52:0,4,330	1/1:14,0:29:75.25:1688,75,0	1/1:2,25:33:17.97:1256,18,0	1/1:13,0:35:78.16:1534,78,0	0/1:33,0:31:99:336,0,389	0/1:10,0:25:99:1326,0,108	0/0:25,0:25:69.23:0,69,1850	0/0:18,0:18:54.16:0,54,1704	1/1:4,20:34:12.51:801,13,0	0/0:23,0:23:69.19:0,69,2407	1/1:0,17:27:15.52:1222,16,0	0/0:25,0:25:69.22:0,69,2227	0/0:34,0:34:99:0,99,3034	0/0:28,0:28:72.24:0,72,2685	1/1:6,10:25:12.40:703,12,0	1/1:28,0:34:59.56:750,60,0	1/1:12,0:21:41.47:921,41,0	0/0:27,0:26:75.04:0,75,2127	1/1:1,20:28:30.02:634,30,0	0/0:16,0:16:42.13:0,42,1327	0/0:34,0:34:99:0,102,3433	1/1:6,10:24:3.01:246,3,0	0/0:32,0:32:84.17:0,84,2846	1/1:25,0:42:96.69:2057,97,0	0/0:6,0:6:18.06:0,18,724
chr10	89017955	.	T	TTGG	4390.47	PASS	AB=0.882;AC=15;AF=0.268;AN=56;BaseQRankSum=8.839;DP=768;FS=15.988;HRun=0;HaplotypeScore=148.2400;InbreedingCoeff=-0.1885;MQ=59.40;MQ0=12;MQRankSum=-9.793;QD=10.66;ReadPosRankSum=1.055;VQSLOD=3.5776;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:45,5:48:99:682,0,543	0/0:8,0:8:24.08:0,24,370	0/0:33,0:20:50.35:0,50,718	0/0:43,0:27:36.67:0,37,636	0/1:24,2:31:99:502,0,408	0/1:29,0:29:62.09:193,0,62	0/1:33,1:38:99:358,0,692	0/1:18,9:28:99:352,0,565	0/1:20,4:24:99:364,0,478	0/0:25,0:25:69.23:0,69,1127	0/0:18,0:18:54.16:0,54,848	0/1:31,1:32:86.62:130,0,87	0/0:24,0:24:72.24:0,72,1188	1/1:23,0:23:15.05:191,15,0	0/0:25,0:25:75.26:0,75,1231	0/0:36,0:36:99:0,105,1685	0/0:27,0:27:73.98:0,74,1260	0/1:21,0:21:77.74:127,0,78	0/1:25,4:27:99:127,0,487	0/1:19,8:25:99:388,0,504	0/0:27,0:26:75.25:0,75,1214	0/1:21,0:22:66.29:66,0,151	0/0:17,0:17:51.14:0,51,767	0/0:35,0:35:99:0,105,1673	0/1:15,0:15:29.55:30,0,76	0/0:31,0:31:93.14:0,93,1504	0/1:24,18:42:99:881,0,600	0/0:7,0:7:21.07:0,21,348
chr10	89018706	.	ACT	A	3019.34	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.314;DP=718;FS=5.764;HRun=0;HaplotypeScore=139.8850;InbreedingCoeff=0.9898;MQ=85.84;MQ0=0;MQRankSum=-2.266;QD=34.71;ReadPosRankSum=2.370;VQSLOD=5.8558;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,2597	1/1:0,7:7:15.05:220,15,0	0/0:28,0:28:72.23:0,72,1244	0/0:19,0:19:48.16:0,48,829	0/0:25,0:25:75.26:0,75,1388	0/0:26,0:26:75.26:0,75,1403	0/0:34,0:34:99:0,102,1871	0/0:31,0:31:84.27:0,84,1514	0/0:24,0:24:72.25:0,72,1348	1/1:3,21:25:66.22:971,66,0	1/1:4,22:26:51.17:751,51,0	0/0:29,0:29:87.30:0,87,1606	0/0:20,0:20:60.21:0,60,1124	0/0:28,0:28:81.28:0,81,1509	0/0:14,0:14:39.13:0,39,730	0/0:23,0:23:69.24:0,69,1292	1/1:0,29:29:84.28:1236,84,0	0/0:28,0:28:84.29:0,84,1543	0/0:27,0:27:81.26:0,81,1484	0/0:22,0:22:66.23:0,66,1236	0/0:42,0:42:99:0,126,2307	0/0:28,0:28:84.29:0,84,1565	0/0:23,0:23:69.24:0,69,1284	0/0:31,0:31:93.32:0,93,1732	0/0:31,0:31:90.31:0,90,1677	0/0:19,1:20:16.09:0,16,969	0/0:24,0:23:72.19:0,72,1272	0/0:6,0:6:18.06:0,18,337
chr10	89019583	.	CT	C	15144.73	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=19.580;DP=708;FS=10.940;HRun=2;HaplotypeScore=108.1725;InbreedingCoeff=0.9920;MQ=85.88;MQ0=0;MQRankSum=-3.315;QD=35.47;ReadPosRankSum=4.083;VQSLOD=4.0331;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:37:99:1324,102,0	1/1:0,9:9:27.09:351,27,0	0/0:29,0:29:81.27:0,81,1203	0/0:23,0:23:56.67:0,57,783	1/1:0,35:35:99:1279,99,0	1/1:0,24:24:63.20:818,63,0	1/1:0,23:23:66.21:856,66,0	0/0:30,0:30:87.29:0,87,1286	1/1:0,26:26:75.24:973,75,0	1/1:0,33:33:93.27:1177,93,0	1/1:0,13:13:33.11:427,33,0	1/1:1,34:35:90.29:1167,90,0	0/0:36,0:36:99:0,108,1594	1/1:0,29:29:72.23:934,72,0	0/0:26,0:26:78.25:0,78,1129	0/0:30,1:31:51.43:0,51,1265	1/1:0,33:33:87.28:1129,87,0	1/1:0,18:18:54.18:701,54,0	1/1:0,19:19:57.19:739,57,0	1/1:1,30:31:81.26:1051,81,0	0/0:14,0:14:42.14:0,42,628	1/1:0,26:26:72.23:934,72,0	0/0:20,0:20:57.19:0,57,851	0/0:28,0:28:84.24:0,84,1233	1/1:0,20:20:54.18:701,54,0	0/0:27,2:29:9.35:0,9,1113	1/1:0,15:15:45.15:584,45,0	0/0:15,0:15:39.13:0,39,584
chr10	89019778	.	G	GA	16961.80	PASS	AB=0.939;AC=35;AF=0.625;AN=56;BaseQRankSum=18.196;DP=764;FS=0.000;HRun=1;HaplotypeScore=194.6165;InbreedingCoeff=0.9254;MQ=63.04;MQ0=0;MQRankSum=-17.653;QD=35.63;ReadPosRankSum=-0.341;VQSLOD=4.1517;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,37:42:87.24:1338,87,0	1/1:1,11:12:36.11:550,36,0	0/0:11,0:11:2.91:0,3,128	0/0:13,0:13:25.13:0,25,314	1/1:4,32:35:66.22:1050,66,0	1/1:2,24:26:63.20:980,63,0	1/1:3,28:31:75.25:1174,75,0	0/0:24,0:24:51.13:0,51,660	1/1:4,30:34:99:1519,99,0	1/1:3,22:24:69.23:1074,69,0	1/1:1,22:22:48.16:764,48,0	1/1:2,32:34:93.32:1471,93,0	0/0:37,0:37:99:0,111,1533	1/1:2,39:41:99:1789,114,0	0/0:43,0:43:99:0,129,1801	0/0:34,1:35:57.59:0,58,1346	1/1:2,14:16:35.96:510,36,0	1/1:5,9:14:36.12:568,36,0	1/1:3,11:14:36.12:573,36,0	1/1:3,16:19:45.15:700,45,0	0/0:36,0:36:99:0,102,1420	1/1:1,14:14:33.10:493,33,0	0/0:25,0:25:75.24:0,75,1031	0/0:42,0:42:99:0,126,1758	1/1:4,35:39:93.29:1425,93,0	0/1:29,2:31:2.43:2,0,1119	1/1:3,21:24:63.20:981,63,0	0/0:22,0:22:66.20:0,66,883
chr10	89019788	.	AG	A	15272.20	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=21.931;DP=765;FS=0.000;HRun=1;HaplotypeScore=204.9357;InbreedingCoeff=0.9158;MQ=67.65;MQ0=0;MQRankSum=-17.777;QD=33.79;ReadPosRankSum=-0.462;VQSLOD=4.1475;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,42:43:84.27:1155,84,0	1/1:0,13:13:39.13:544,39,0	0/1:14,0:14:37.09:37,0,161	0/0:18,0:18:41.81:0,42,646	1/1:1,39:40:78.24:1070,78,0	1/1:0,24:24:72.24:1004,72,0	1/1:1,28:29:69.21:943,69,0	0/0:31,0:31:75.22:0,75,1122	1/1:0,33:33:96.32:1336,96,0	1/1:0,26:25:72.24:999,72,0	1/1:1,22:22:54.17:736,54,0	1/1:1,30:31:87.29:1210,87,0	0/0:36,0:36:99:0,108,1692	1/1:0,41:41:99:1526,111,0	0/0:46,0:46:99:0,138,2198	0/0:31,1:32:54.46:0,54,1422	1/1:1,13:14:26.61:357,27,0	1/1:0,14:14:36.12:503,36,0	1/1:0,17:17:51.17:712,51,0	1/1:0,17:17:39.13:544,39,0	0/0:35,0:35:99:0,99,1505	1/1:0,17:16:36.12:502,36,0	0/0:24,0:24:72.25:0,72,1151	0/0:44,0:44:99:0,132,2086	1/1:0,37:37:96.32:1340,96,0	0/0:29,2:31:9.52:0,10,1284	1/1:0,19:19:54.18:754,54,0	0/0:15,0:15:42.14:0,42,671
chr10	89019924	.	C	CTGGA	689.62	PASS	AB=0.875;AC=6;AF=0.107;AN=56;BaseQRankSum=6.016;DP=623;FS=2.494;HRun=0;HaplotypeScore=126.3273;InbreedingCoeff=-0.1088;MQ=88.50;MQ0=0;MQRankSum=-3.860;QD=7.04;ReadPosRankSum=-2.590;VQSLOD=2.4976;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:60.72:0,61,1061	0/1:9,1:10:82.26:82,0,124	0/0:27,0:27:78.12:0,78,1487	0/0:25,0:24:65.78:0,66,1131	0/0:25,0:25:60.09:0,60,1066	0/0:22,0:22:66.14:0,66,1289	0/0:26,0:26:72.21:0,72,1370	0/0:24,0:24:69:0,69,1313	0/1:17,0:17:1.89:2,0,444	0/1:17,6:23:99:373,0,161	0/1:11,3:14:56.58:57,0,83	0/0:22,0:22:62.95:0,63,1179	0/0:21,0:21:62.76:0,63,1180	0/0:20,0:20:50.92:0,51,919	0/0:25,0:25:75.21:0,75,1452	0/0:16,0:16:48.14:0,48,930	0/1:10,6:16:46.63:283,0,47	0/0:20,0:20:57.11:0,57,1146	0/1:18,0:18:8.95:9,0,364	0/0:27,0:27:53.13:0,53,770	0/0:32,0:32:96.27:0,96,1794	0/0:18,0:18:48.13:0,48,923	0/0:14,0:14:39.07:0,39,628	0/0:32,0:32:96.32:0,96,1943	0/0:22,0:22:63.22:0,63,1315	0/0:25,0:25:62.42:0,62,1339	0/0:25,0:25:69.15:0,69,752	0/0:15,0:15:45.15:0,45,934
chr10	89019925	.	C	CACT	492.80	PASS	AB=0.854;AC=5;AF=0.089;AN=56;BaseQRankSum=5.807;DP=622;FS=0.000;HRun=0;HaplotypeScore=113.5842;InbreedingCoeff=-0.0877;MQ=89.06;MQ0=0;MQRankSum=-4.202;QD=6.08;ReadPosRankSum=-3.010;VQSLOD=1.6701;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:22.24:0,22,829	0/1:9,1:10:68.29:68,0,128	0/0:27,0:27:78.21:0,78,1359	0/0:25,0:25:65.60:0,66,1057	0/0:23,0:23:60.11:0,60,1009	0/0:22,0:22:66.06:0,66,1176	0/0:27,0:27:72.22:0,72,1264	0/0:26,0:26:72.11:0,72,1203	0/0:16,0:16:45.50:0,45,433	0/1:16,6:22:99:202,0,255	0/1:11,3:14:46.82:47,0,116	0/0:21,0:21:60.21:0,60,1101	0/0:21,0:21:63.17:0,63,1129	0/0:20,0:20:51.13:0,51,908	0/0:25,0:25:75.22:0,75,1287	0/0:15,0:15:45.09:0,45,772	0/1:12,6:18:42.52:285,0,43	0/0:20,0:20:57.20:0,57,1058	0/1:17,0:17:0.12:0,0,293	0/0:27,0:27:30.01:0,30,596	0/0:31,0:31:93.25:0,93,1645	0/0:18,0:18:47.91:0,48,802	0/0:13,0:13:32.92:0,33,523	0/0:32,0:32:96.29:0,96,1744	0/0:23,0:23:63.22:0,63,1169	0/0:25,0:25:71.41:0,71,1226	0/0:25,0:25:55:0,55,619	0/0:15,0:15:45.02:0,45,778
chr10	89020007	.	C	CTT	6330.37	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=6.193;DP=561;FS=0.705;HRun=9;HaplotypeScore=96.9931;InbreedingCoeff=0.9785;MQ=67.54;MQ0=0;MQRankSum=-2.761;QD=24.73;ReadPosRankSum=1.414;VQSLOD=4.5033;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,1310	1/1:0,0:7:14.97:51,15,0	0/0:12,0:12:23.95:0,24,228	0/0:2,0:2:6.02:0,6,64	1/1:4,30:38:80.98:1040,81,0	1/1:1,22:24:57.16:852,57,0	1/1:3,16:20:13.21:597,13,0	0/0:26,0:26:72.10:0,72,735	0/0:15,0:15:33.05:0,33,351	1/1:3,0:24:23.36:147,23,0	1/1:1,0:18:38.37:151,38,0	1/1:2,18:20:48.12:712,48,0	0/0:15,0:16:44.82:0,45,442	1/1:0,16:17:23.57:332,24,0	0/0:20,0:20:57.14:0,57,606	0/0:18,0:18:54.14:0,54,575	1/1:1,0:23:42.42:145,42,0	1/1:0,22:22:63.21:970,63,0	0/0:26,0:27:57.04:0,57,636	0/0:21,0:21:54.11:0,54,567	0/0:11,0:11:33.05:0,33,335	1/1:2,18:20:42.57:612,43,0	0/0:22,0:22:63.14:0,63,663	0/0:10,0:10:27.05:0,27,279	1/1:0,21:22:48.16:721,48,0	0/0:27,0:27:63.09:0,63,661	0/0:26,0:26:72.13:0,72,756	0/0:10,0:10:27.05:0,27,278
chr10	89020497	.	G	GCTAGA	22613.15	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=14.108;DP=727;FS=1.327;HRun=0;HaplotypeScore=166.4866;InbreedingCoeff=0.9941;MQ=75.00;MQ0=0;MQRankSum=-17.693;QD=56.96;ReadPosRankSum=0.348;VQSLOD=4.9078;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,23:33:65.85:1839,66,0	1/1:0,11:10:12.04:332,12,0	0/0:28,0:28:72.24:0,72,1337	0/0:34,0:34:90.30:0,90,1708	1/1:8,13:21:27.09:764,27,0	1/1:2,22:24:51.18:1562,51,0	1/1:12,17:29:48.14:1272,48,0	0/0:32,0:32:90.28:0,90,1721	1/1:2,25:27:60.21:1837,60,0	1/1:4,15:20:53.97:1571,54,0	1/1:2,15:18:42.13:1172,42,0	1/1:8,27:37:75.26:2161,75,0	0/0:30,0:30:81.28:0,81,1664	1/1:9,18:27:60.11:1624,60,0	0/0:46,0:46:99:0,117,2313	0/0:32,0:32:96.33:0,96,1977	1/1:7,11:18:33.09:941,33,0	1/1:3,14:16:30.08:920,30,0	1/1:11,7:18:44.99:949,45,0	1/1:10,11:22:42.13:1154,42,0	0/0:48,0:48:99:0,129,2635	1/1:11,14:25:45.11:1264,45,0	0/0:12,0:12:33.11:0,33,666	0/0:35,0:35:93.30:0,93,1889	1/1:4,22:26:66.23:1979,66,0	0/0:27,0:27:75.26:0,75,1553	1/1:7,16:23:51.10:1273,51,0	0/0:6,0:6:18.06:0,18,373
chr10	89020577	.	CT	C	14847.06	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=19.077;DP=777;FS=8.101;HRun=1;HaplotypeScore=145.0660;InbreedingCoeff=0.9997;MQ=68.02;MQ0=2;MQRankSum=-11.264;QD=33.67;ReadPosRankSum=1.680;VQSLOD=3.7714;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,32:38:92.65:1147,93,0	1/1:3,7:10:29.98:342,30,0	0/0:30,0:27:64.15:0,64,919	0/0:35,0:32:90.14:0,90,1185	1/1:1,15:16:33.10:443,33,0	1/1:4,27:31:89.95:1073,90,0	1/1:5,23:28:78.20:1034,78,0	0/0:36,0:36:99:0,108,1500	1/1:2,24:25:75.04:934,75,0	1/1:9,25:34:99:1317,102,0	1/1:2,21:23:51.13:669,51,0	1/1:1,31:32:95.81:1096,96,0	0/0:32,0:32:96.26:0,96,1375	1/1:2,26:28:80.97:1017,81,0	0/0:45,0:45:99:0,132,1867	0/0:34,0:34:99:0,102,1472	1/1:3,18:21:53.88:655,54,0	1/1:2,8:10:27.04:353,27,0	1/1:4,16:19:42.66:530,43,0	1/1:1,27:28:72.16:944,72,0	0/0:42,0:42:99:0,123,1672	1/1:3,29:32:78.14:994,78,0	0/0:14,0:14:39.10:0,39,532	0/0:33,0:33:99:0,99,1348	1/1:2,26:28:78.10:987,78,0	0/0:22,0:22:66.20:0,66,916	1/1:3,33:36:99:1313,105,0	0/0:12,0:12:36.12:0,36,527
chr10	89020621	.	T	TAG	20538.89	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=1.470;DP=799;FS=0.615;HRun=0;HaplotypeScore=142.4280;InbreedingCoeff=0.9999;MQ=63.11;MQ0=1;MQRankSum=-7.494;QD=39.57;ReadPosRankSum=-4.069;VQSLOD=4.9742;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,22:36:81.21:1312,81,0	1/1:1,14:15:42.14:714,42,0	0/0:29,0:27:57.15:0,57,712	0/0:31,0:28:38.78:0,39,642	1/1:5,28:34:81.26:1335,81,0	1/1:4,14:18:39.13:662,39,0	1/1:3,33:36:93.30:1555,93,0	1/1:4,32:36:99:1652,102,0	1/1:5,18:23:66.19:1066,66,0	1/1:9,33:42:99:1782,108,0	1/1:4,27:32:69.24:1157,69,0	1/1:7,14:21:42.14:713,42,0	0/0:24,0:24:57.17:0,57,722	1/1:12,15:27:48.16:808,48,0	0/0:36,0:36:93.30:0,93,1209	0/0:29,0:29:69.22:0,69,897	1/1:7,18:26:51.15:837,51,0	1/1:2,15:17:42.14:713,42,0	1/1:6,20:26:63.21:1047,63,0	1/1:3,25:29:72.25:1223,72,0	0/0:32,0:32:87.21:0,87,1069	1/1:5,28:33:84.26:1375,84,0	0/0:28,0:28:78.25:0,78,1014	0/0:34,0:34:87.28:0,87,1131	1/1:10,23:34:75.24:1242,75,0	0/0:25,0:25:69.21:0,69,883	1/1:7,26:34:81.25:1346,81,0	0/0:12,0:12:30.10:0,30,390
chr10	89020742	.	A	AAG	12889.70	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=17.228;DP=760;FS=1.021;HRun=0;HaplotypeScore=181.1861;InbreedingCoeff=0.9239;MQ=66.48;MQ0=4;MQRankSum=-4.023;QD=26.09;ReadPosRankSum=0.040;VQSLOD=5.3615;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:53,0:54:99:1395,103,0	1/1:12,0:11:27.09:406,27,0	0/0:42,0:25:25.36:0,25,461	0/1:45,0:28:18.59:19,0,217	1/1:27,0:27:58.31:721,58,0	1/1:30,0:30:54.56:757,55,0	1/1:15,0:15:33.56:462,34,0	0/0:26,0:26:42.03:0,42,470	1/1:26,0:26:58.48:828,58,0	1/1:27,4:33:85.10:1018,85,0	1/1:20,0:20:54.13:748,54,0	1/1:27,0:27:56.25:683,56,0	0/0:23,0:23:66.18:0,66,821	1/1:19,0:19:38.24:541,38,0	0/0:36,0:36:96.30:0,96,1243	0/0:22,0:22:57.17:0,57,734	1/1:30,0:30:49.70:626,50,0	1/1:14,0:14:24.81:263,25,0	1/1:16,0:15:27.50:344,28,0	1/1:35,0:35:70.04:984,70,0	0/0:30,0:31:72.31:0,72,955	1/1:31,0:31:78.62:1094,79,0	0/0:16,0:16:42.09:0,42,506	0/0:26,0:26:60.13:0,60,704	1/1:25,0:25:52.87:672,53,0	0/0:30,0:30:25.87:0,26,824	1/1:35,0:35:90.29:1329,90,0	0/0:14,0:14:42.12:0,42,537
chr10	89020750	.	G	GA	6948.06	PASS	AB=0.711;AC=31;AF=0.554;AN=56;BaseQRankSum=17.121;DP=722;FS=0.000;HRun=1;HaplotypeScore=178.8159;InbreedingCoeff=0.7262;MQ=66.39;MQ0=6;MQRankSum=2.061;QD=16.16;ReadPosRankSum=5.401;VQSLOD=5.0473;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,27:43:45.94:713,46,0	1/1:2,10:11:6.17:214,6,0	0/0:36,0:23:44.39:0,44,656	0/0:41,0:24:25.09:0,25,317	1/1:16,9:25:53.80:426,54,0	1/1:16,12:28:13.52:373,14,0	1/1:8,8:16:0.52:265,1,0	0/0:22,0:22:54.01:0,54,609	1/1:12,12:24:27.75:456,28,0	1/1:22,13:35:33.55:610,34,0	1/1:10,12:22:34.11:452,34,0	1/1:16,9:25:19.53:330,20,0	0/0:24,0:24:69.21:0,69,902	1/1:5,11:16:39.09:331,39,0	0/0:34,0:34:99:0,102,1397	0/0:23,0:23:60.19:0,60,815	0/1:18,12:30:11.29:268,0,11	1/1:7,4:11:7.49:152,7,0	0/1:13,5:17:29.22:193,0,29	1/1:15,15:30:56.64:572,57,0	0/0:32,0:32:91.17:0,91,1211	1/1:12,19:31:55.78:586,56,0	0/0:17,0:17:51.12:0,51,641	0/0:24,0:24:72.13:0,72,859	1/1:13,10:23:24.12:428,24,0	0/0:23,1:24:40.85:0,41,903	0/1:17,23:40:47.39:580,0,47	0/0:14,0:14:42.13:0,42,569
chr10	89020753	.	G	GA	5113.98	PASS	AB=0.830;AC=33;AF=0.589;AN=56;BaseQRankSum=16.057;DP=717;FS=5.426;HRun=0;HaplotypeScore=181.8080;InbreedingCoeff=0.6980;MQ=66.66;MQ0=7;MQRankSum=-4.516;QD=11.14;ReadPosRankSum=8.078;VQSLOD=4.5034;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:19,27:45:13.48:509,13,0	1/1:1,10:10:12.38:176,12,0	0/0:41,0:27:50:0,50,801	0/1:43,0:24:23.64:24,0,296	1/1:14,9:23:12.86:232,13,0	1/1:16,12:28:2.93:263,3,0	1/1:9,8:17:10.46:229,10,0	0/0:21,0:21:54.47:0,54,666	1/1:12,12:24:11.40:348,11,0	1/1:21,13:34:49.32:408,49,0	1/1:9,12:21:9.73:279,10,0	0/1:14,9:23:26.99:185,0,27	0/0:24,0:24:69.21:0,69,928	1/1:4,11:15:31.37:243,31,0	0/0:34,0:34:99:0,102,1409	0/0:23,0:23:66.19:0,66,872	1/1:16,12:28:3.29:268,3,0	1/1:6,4:10:20.72:161,21,0	0/1:12,5:16:74.75:164,0,75	1/1:13,15:28:10.13:352,10,0	0/0:35,0:35:91.17:0,91,1239	1/1:11,19:30:49.09:446,49,0	0/0:16,0:16:45.06:0,45,603	0/0:22,0:22:66.12:0,66,819	1/1:11,10:21:21.95:278,22,0	0/0:23,1:24:42.85:0,43,881	1/1:17,23:40:33.55:548,34,0	0/0:18,0:18:54.12:0,54,669
chr10	89021367	.	CT	C	19480.88	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=21.160;DP=849;FS=10.509;HRun=1;HaplotypeScore=140.9679;InbreedingCoeff=0.9863;MQ=81.27;MQ0=0;MQRankSum=-4.879;QD=39.60;ReadPosRankSum=2.176;VQSLOD=2.9956;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,51:52:99:2013,144,0	1/1:0,17:17:48.16:671,48,0	0/0:21,0:21:60.20:0,60,920	0/0:27,0:27:81.24:0,81,1234	1/1:0,23:23:69.23:965,69,0	1/1:0,18:18:54.18:753,54,0	1/1:0,26:26:72.24:1007,72,0	0/0:32,0:32:96.27:0,96,1369	1/1:0,25:25:72.24:1002,72,0	1/1:0,33:33:96.32:1338,96,0	1/1:0,21:21:63.21:878,63,0	1/1:0,36:36:99:1426,102,0	0/0:49,0:49:99:0,144,2302	1/1:0,43:43:99:1803,129,0	0/0:22,0:22:66.23:0,66,1055	0/0:33,0:33:99:0,99,1580	1/1:0,33:33:93.31:1301,93,0	1/1:0,19:19:57.19:797,57,0	1/1:0,30:30:90.22:1171,90,0	1/1:0,27:27:81.23:1110,81,0	0/0:60,0:60:99:0,172,2650	1/1:0,29:29:74.74:1024,75,0	0/0:26,0:26:75.25:0,75,1186	0/0:42,0:42:99:0,126,2007	1/1:0,34:34:87.24:1217,87,0	0/0:28,2:30:6.53:0,7,1257	1/1:0,26:26:72.24:1006,72,0	0/0:15,0:15:42.14:0,42,668
chr10	89022866	.	A	ACC	2205.77	PASS	AB=0.606;AC=22;AF=0.393;AN=56;BaseQRankSum=0.174;DP=592;FS=9.157;HRun=9;HaplotypeScore=92.9353;InbreedingCoeff=0.8164;MQ=85.02;MQ0=0;MQRankSum=-1.442;QD=9.39;ReadPosRankSum=-2.854;VQSLOD=0.0553;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:81.09:0,81,842	0/0:10,0:10:18.02:0,18,192	0/0:24,0:24:53.02:0,53,546	0/0:17,0:17:36.04:0,36,369	1/1:4,8:13:15.01:197,15,0	1/1:5,8:17:17.20:207,17,0	1/1:9,12:25:25.55:303,26,0	1/1:9,0:17:9.74:45,10,0	0/0:22,0:22:54.12:0,54,575	0/0:16,0:16:36.09:0,36,383	0/0:22,0:23:42.01:0,42,502	1/1:8,0:31:10.55:105,11,0	0/0:29,0:29:75.14:0,75,786	0/1:8,0:22:58.23:68,0,58	0/0:25,0:25:63.14:0,63,670	0/0:28,0:28:75.15:0,75,798	0/0:28,0:29:83.90:0,84,862	1/1:5,15:23:45.82:592,46,0	1/1:7,8:15:15.07:214,15,0	1/1:4,10:15:17.46:206,17,0	0/0:29,0:29:69.14:0,69,734	0/1:7,0:21:38.20:41,0,38	0/0:23,0:23:52.80:0,53,598	0/0:19,0:19:54.11:0,54,565	1/1:6,7:16:15.02:196,15,0	0/0:23,0:23:51.10:0,51,543	1/1:8,11:20:20.04:248,20,0	0/0:4,0:4:9.02:0,9,96
chr10	89023094	.	G	GC	8024.26	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-15.701;DP=714;FS=3.019;HRun=5;HaplotypeScore=66.0252;InbreedingCoeff=0.9974;MQ=85.88;MQ0=0;MQRankSum=-3.253;QD=34.59;ReadPosRankSum=0.308;VQSLOD=5.1966;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:38:99:1342,102,0	1/1:1,13:14:33.11:434,33,0	0/0:23,0:23:53.99:0,54,555	0/0:25,0:25:60.11:0,60,631	0/0:21,0:21:63.16:0,63,677	0/0:35,0:35:99:0,99,1064	0/0:22,0:22:57.14:0,57,613	1/1:5,27:32:84.27:1100,84,0	1/1:1,25:26:69.22:908,69,0	1/1:1,11:12:36.11:462,36,0	1/1:2,11:13:36.11:460,36,0	0/0:28,0:28:75.17:0,75,798	0/0:36,0:36:99:0,102,1079	0/0:28,0:28:78.19:0,78,838	0/0:40,0:40:99:0,111,1193	0/0:27,0:27:72.18:0,72,773	1/1:0,28:28:78.21:1003,78,0	0/0:20,0:20:57.14:0,57,612	1/1:2,20:22:63.16:796,63,0	1/1:2,17:19:48.11:611,48,0	0/0:39,0:39:99:0,105,1129	0/0:19,0:19:48.12:0,48,516	0/0:25,0:25:72.18:0,72,773	0/0:37,0:37:96.22:0,96,1023	0/0:28,0:28:83.24:0,83,877	0/0:23,1:24:26.68:0,27,631	1/1:2,26:28:69.01:908,69,0	0/0:5,0:5:15.04:0,15,161
chr10	89023320	.	C	CATAT	2734.88	PASS	AB=0.813;AC=14;AF=0.250;AN=56;BaseQRankSum=0.864;DP=547;FS=0.545;HRun=0;HaplotypeScore=97.3309;InbreedingCoeff=0.7713;MQ=71.48;MQ0=0;MQRankSum=-1.866;QD=23.99;ReadPosRankSum=0.042;VQSLOD=3.3001;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:47.24:0,47,896	1/1:1,0:4:9.03:158,9,0	0/0:8,0:9:3.01:0,3,33	0/1:12,0:10:6.21:6,0,45	0/0:28,0:28:54.18:0,54,906	0/0:30,0:30:66.22:0,66,1114	0/0:15,0:15:19.43:0,19,484	0/0:42,0:42:78.24:0,78,1257	0/0:15,0:16:33.11:0,33,534	1/1:7,2:14:24.08:452,24,0	1/1:5,2:13:11.83:192,12,0	0/0:19,0:19:48.15:0,48,782	0/0:23,0:23:54.17:0,54,875	0/0:19,0:19:42.13:0,42,679	0/0:30,0:31:81.26:0,81,1307	0/0:16,0:16:39.13:0,39,655	0/1:6,4:15:26.94:410,0,27	0/0:19,0:19:45.09:0,45,702	1/1:5,13:20:47.68:944,48,0	1/1:8,9:18:15.05:373,15,0	0/0:6,0:9:16.59:0,17,209	0/0:17,0:18:39.09:0,39,606	0/0:28,0:29:50.46:0,50,990	0/0:17,0:18:45.15:0,45,733	0/0:20,0:20:51.15:0,51,831	0/0:27,0:28:66.22:0,66,1089	1/1:6,8:17:17.56:384,18,0	0/0:14,0:15:39.12:0,39,613
chr10	89024488	.	A	ATGCT	3942.01	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-9.210;DP=761;FS=3.264;HRun=0;HaplotypeScore=118.6232;InbreedingCoeff=0.8241;MQ=72.16;MQ0=4;MQRankSum=0.040;QD=20.97;ReadPosRankSum=-1.959;VQSLOD=2.7620;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,16:34:1.73:959,2,0	0/0:19,0:19:30.10:0,30,460	0/1:38,0:25:0:0,0,0	0/0:45,0:33:2.04:0,2,31	0/0:21,0:21:3.33:0,3,472	0/0:35,0:35:66.18:0,66,969	0/0:19,0:20:30.08:0,30,417	0/0:29,0:28:12.02:0,12,141	1/1:22,14:36:42.14:985,42,0	0/0:29,0:29:33.11:0,33,505	0/0:17,0:17:12.04:0,12,186	0/0:30,0:30:54.18:0,54,815	0/0:33,0:33:57.19:0,57,872	0/0:28,0:28:48.16:0,48,741	0/0:22,0:22:42.13:0,42,628	0/0:28,0:29:57.19:0,57,861	0/0:19,0:19:33.09:0,33,464	0/0:17,0:17:24.08:0,24,371	1/1:19,9:28:27.09:596,27,0	1/1:12,9:21:21.07:493,21,0	0/0:36,0:36:45.14:0,45,667	0/0:24,0:24:36.08:0,36,508	0/0:23,0:25:39.12:0,39,563	0/0:28,0:28:54.18:0,54,835	0/0:25,0:25:45.15:0,45,691	0/0:29,0:29:30.09:0,30,437	1/1:16,14:30:39.13:909,39,0	0/0:13,0:13:18.06:0,18,276
chr10	89027383	.	TAGAC	T	8592.51	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=14.778;DP=853;FS=2.507;HRun=0;HaplotypeScore=162.1896;InbreedingCoeff=0.9591;MQ=66.52;MQ0=7;MQRankSum=-2.145;QD=20.08;ReadPosRankSum=1.690;VQSLOD=4.7989;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,26:36:69.53:1030,70,0	1/1:9,0:15:21.03:213,21,0	0/0:41,0:37:33.09:0,33,620	0/0:36,0:31:36.06:0,36,662	1/1:11,17:28:42.14:647,42,0	1/1:8,22:29:48.16:766,48,0	1/1:10,23:33:63.21:1006,63,0	1/1:19,0:34:11.88:92,12,0	1/1:10,19:29:48.16:766,48,0	1/1:17,0:35:58.87:532,59,0	1/1:9,0:26:29.97:263,30,0	1/1:11,23:34:54.18:862,54,0	0/0:24,0:24:51.18:0,51,1198	1/1:9,24:32:45.15:718,45,0	0/0:15,0:39:57.17:0,57,961	0/0:31,0:31:69.20:0,69,1467	1/1:9,0:17:21.48:192,21,0	1/1:12,13:24:27.06:404,27,0	0/0:23,0:22:31.30:0,31,606	0/0:35,0:35:69.19:0,69,1516	0/0:48,0:48:99:0,102,2420	1/1:10,16:26:33.11:527,33,0	0/0:35,0:35:72.18:0,72,1518	0/0:25,1:26:0.26:0,0,952	1/1:6,21:27:36.12:575,36,0	0/0:48,0:47:50.30:0,50,1679	0/0:29,0:26:75.24:0,75,1747	0/0:9,0:9:27.09:0,27,608
chr10	89027485	.	T	TTCCC	6129.01	PASS	AB=0.964;AC=12;AF=0.214;AN=56;BaseQRankSum=-10.699;DP=677;FS=6.192;HRun=0;HaplotypeScore=111.4742;InbreedingCoeff=0.8368;MQ=90.20;MQ0=0;MQRankSum=-4.617;QD=36.05;ReadPosRankSum=0.378;VQSLOD=4.2734;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.28:0,87,1512	1/1:1,7:8:21.07:539,21,0	0/0:39,0:38:91.14:0,91,1446	0/0:28,0:28:48.89:0,49,679	0/0:20,0:20:60.19:0,60,1040	0/0:19,0:19:57.19:0,57,999	0/0:19,0:19:54.12:0,54,920	1/1:13,25:38:84.21:1948,84,0	0/0:19,0:19:51.12:0,51,846	1/1:6,23:28:66.21:1638,66,0	1/1:4,16:20:48.16:1148,48,0	0/0:26,0:26:72.25:0,72,1271	0/0:21,0:21:57.18:0,57,980	0/0:25,0:25:66.23:0,66,1166	0/0:33,0:33:84.27:0,84,1439	0/0:34,0:34:93.26:0,93,1561	1/1:4,14:20:33.11:846,33,0	0/1:23,1:24:7.98:8,0,1072	0/0:15,0:15:39.13:0,39,687	0/0:31,0:31:81.28:0,81,1442	0/0:35,0:35:87.26:0,87,1445	0/0:14,0:14:42.14:0,42,723	0/0:16,0:16:45.15:0,45,801	0/0:29,0:29:84.24:0,84,1449	0/0:14,0:14:33.11:0,33,587	0/1:30,1:31:1.94:2,0,1203	0/0:31,0:30:84.24:0,84,1447	0/0:8,0:8:21.07:0,21,374
chr10	89028112	.	TGTTTG	T	2026.29	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=8.959;DP=747;FS=6.056;HRun=0;HaplotypeScore=131.8182;InbreedingCoeff=0.8914;MQ=61.31;MQ0=10;MQRankSum=0.095;QD=17.93;ReadPosRankSum=0.307;VQSLOD=2.5905;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:57.17:0,57,1523	0/0:16,0:16:39.13:0,39,1030	0/1:32,0:15:2.34:2,0,217	0/0:53,0:36:51.08:0,51,1182	0/0:23,0:23:60.21:0,60,1631	0/0:21,0:21:36.12:0,36,977	0/0:26,0:26:39.12:0,39,1033	0/0:26,0:26:37.36:0,37,813	0/0:24,0:34:54.17:0,54,1322	0/0:23,0:23:51.18:0,51,1402	0/0:17,0:17:45.15:0,45,1271	0/0:20,0:20:42.12:0,42,1106	0/0:16,0:16:36.12:0,36,1020	0/0:20,0:20:42.13:0,42,1083	0/0:29,0:29:60.21:0,60,1687	0/0:24,0:24:51.17:0,51,1358	0/0:40,0:40:87.28:0,87,2360	0/0:33,0:33:63.22:0,63,1709	1/1:14,13:26:36.01:624,36,0	1/1:7,14:21:42.14:772,42,0	0/0:42,0:42:66.23:0,66,1862	0/0:19,0:19:39.12:0,39,1000	0/0:22,0:22:54.19:0,54,1525	0/0:37,0:37:87.28:0,87,2357	0/0:21,0:21:42.14:0,42,1192	0/0:31,0:31:69.24:0,69,1908	1/1:12,21:33:42.14:772,42,0	0/0:13,0:13:27.09:0,27,760
chr10	89029168	.	GATAGATAGATAGATAGATA	G	1782.43	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=2.270;DP=658;FS=1.251;HRun=0;HaplotypeScore=338.8011;InbreedingCoeff=0.4315;MQ=55.27;MQ0=3;MQRankSum=-4.418;QD=11.73;ReadPosRankSum=-2.964;VQSLOD=1.3878;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:59.94:0,60,2333	0/1:11,0:10:32.99:65,0,33	0/1:13,0:11:9.05:9,0,114	0/0:6,0:3:6.02:0,6,78	0/0:33,0:33:72.03:0,72,1870	0/0:20,0:20:47.92:0,48,2080	0/0:16,0:15:19.94:0,20,630	0/1:31,0:30:77.73:587,0,78	0/1:25,0:25:36.19:36,0,799	1/1:9,12:21:27.09:847,27,0	1/1:20,2:21:20.98:311,21,0	0/0:21,0:21:38.97:0,39,928	0/0:31,0:31:69.23:0,69,2553	0/0:21,0:21:48.03:0,48,1068	0/0:35,0:35:90.28:0,90,2884	0/0:28,0:27:51.17:0,51,1232	1/1:12,16:28:3.54:81,4,0	0/0:30,0:30:4.98:0,5,2033	0/0:12,0:12:15.05:0,15,448	0/0:42,0:42:70.61:0,71,2381	0/0:12,0:12:33.11:0,33,1939	0/0:22,0:22:48.04:0,48,1680	0/0:24,0:24:57.19:0,57,2788	0/0:14,0:13:27.09:0,27,725	0/0:24,0:24:52.24:0,52,2040	0/0:34,0:34:26.50:0,26,3319	0/0:30,0:30:37.32:0,37,1819	0/0:21,0:21:46.02:0,46,3264
chr10	89029172	.	GATAGATAGATAGATA	G	1891.44	PASS	AB=0.916;AC=11;AF=0.196;AN=56;BaseQRankSum=4.133;DP=648;FS=2.534;HRun=0;HaplotypeScore=284.7616;InbreedingCoeff=0.2786;MQ=54.77;MQ0=2;MQRankSum=-6.343;QD=10.34;ReadPosRankSum=-3.613;VQSLOD=1.9863;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:2.43:0,2,1936	0/1:3,8:10:32.92:100,0,33	0/1:13,0:11:9.05:9,0,114	0/0:6,0:3:6.02:0,6,78	0/0:32,0:32:72.03:0,72,1646	0/0:20,0:20:47.92:0,48,1827	0/0:18,0:16:23.02:0,23,755	0/1:33,0:32:99:650,0,212	0/1:26,0:26:99:185,0,597	1/1:24,0:24:0.35:625,0,0	1/1:20,0:20:20.92:271,21,0	0/0:20,0:20:38.97:0,39,939	0/0:29,0:29:69.23:0,69,2115	0/0:20,0:20:48.03:0,48,1140	0/0:35,0:35:93.29:0,93,2715	0/0:27,0:26:51.17:0,51,1259	1/1:28,0:27:8.97:89,9,0	0/1:28,0:28:99:112,0,1716	0/0:10,0:10:14.62:0,15,283	0/0:40,0:40:52.25:0,52,1978	0/0:11,0:11:33.11:0,33,1627	0/0:22,0:22:48.04:0,48,1547	0/0:25,0:25:63.21:0,63,2624	0/0:14,0:13:27.09:0,27,626	0/0:24,0:24:1.66:0,2,1840	0/0:35,0:35:29.51:0,30,2871	0/0:28,0:28:20.52:0,21,1800	0/0:21,0:21:27.26:0,27,2748
chr10	89029184	.	GATA	G	2283.91	PASS	AB=0.946;AC=17;AF=0.304;AN=56;BaseQRankSum=6.165;DP=638;FS=3.288;HRun=0;HaplotypeScore=149.1919;InbreedingCoeff=-0.0268;MQ=52.25;MQ0=2;MQRankSum=-6.299;QD=7.07;ReadPosRankSum=-5.182;VQSLOD=1.5384;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:31,2:32:74.68:75,0,823	0/1:9,1:11:29.91:123,0,30	0/1:8,0:6:6.08:6,0,131	0/0:6,0:3:6.02:0,6,78	0/0:36,0:38:43.72:0,44,1300	0/0:20,0:25:62.97:0,63,941	0/0:15,0:13:23.42:0,23,380	0/1:32,0:31:99:661,0,234	0/1:24,2:30:99:197,0,401	1/1:16,0:19:3.05:398,3,0	1/1:15,1:16:14.92:288,15,0	0/0:20,0:20:38.72:0,39,413	0/0:27,0:27:69.31:0,69,1158	0/0:15,2:17:41.15:0,41,560	0/0:38,0:38:99:0,111,1766	0/0:25,0:24:51.06:0,51,704	1/1:27,0:26:0.93:132,1,0	0/1:26,1:28:65.74:66,0,900	0/1:7,0:7:99:100,0,115	0/1:39,0:39:99:143,0,1010	0/0:13,0:13:39.13:0,39,724	0/1:19,2:21:26.98:27,0,557	0/0:24,0:24:69.23:0,69,1196	0/0:14,0:13:30.09:0,30,468	0/1:21,2:24:99:156,0,922	0/0:32,0:32:41.54:0,42,1406	0/1:23,3:26:76.44:76,0,720	0/0:20,0:20:19.40:0,19,1062
chr10	89029187	.	A	ATAG	1234.62	PASS	AB=0.815;AC=15;AF=0.268;AN=56;BaseQRankSum=12.426;DP=655;FS=3.644;HRun=0;HaplotypeScore=167.4024;InbreedingCoeff=-0.1728;MQ=51.52;MQ0=3;MQRankSum=-4.759;QD=4.07;ReadPosRankSum=-2.264;VQSLOD=2.0950;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:33:11.67:0,12,767	0/1:11,0:11:32.61:106,0,33	0/1:7,0:5:4.72:5,0,135	0/0:5,0:2:6.02:0,6,77	0/0:36,0:38:60.57:0,61,1395	0/0:26,0:26:62.97:0,63,936	0/0:15,0:13:23.95:0,24,360	0/0:16,0:31:9.35:0,9,446	0/1:18,0:33:99:153,0,500	0/1:19,0:22:15.27:113,0,15	1/1:14,0:24:7.74:114,8,0	0/1:8,1:22:59.88:60,0,269	0/0:24,0:25:75.25:0,75,1198	0/1:15,0:19:99:120,0,347	0/0:37,0:37:99:0,111,1780	0/1:13,1:26:75.47:75,0,485	0/1:20,0:26:10.55:52,0,11	0/1:26,0:30:0.28:0,0,871	0/1:3,0:7:38.82:39,0,61	0/0:29,0:38:38.90:0,39,832	0/0:13,0:13:39.13:0,39,681	0/1:17,0:23:99:257,0,269	0/0:23,0:23:69.24:0,69,1173	0/0:12,0:13:30.10:0,30,469	0/1:22,0:25:16.28:16,0,900	0/0:29,0:30:82.47:0,82,1395	0/1:19,0:24:99:279,0,396	0/0:20,0:20:32.35:0,32,942
chr10	89029281	.	A	AATAG	2795.57	PASS	AB=0.680;AC=33;AF=0.660;AN=50;BaseQRankSum=2.247;DP=596;FS=1.170;HRun=0;HaplotypeScore=142.6893;InbreedingCoeff=0.7151;MQ=59.41;MQ0=4;MQRankSum=-0.399;QD=7.94;ReadPosRankSum=-1.460;VQSLOD=2.7803;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:3.48:0,3,46	./.	./.	./.	1/1:22,0:22:10.40:91,10,0	1/1:14,0:14:6.02:95,6,0	1/1:11,0:9:6:54,6,0	1/1:63,0:57:14.95:153,15,0	1/1:21,0:21:5.87:55,6,0	1/1:29,0:30:35.25:387,35,0	1/1:13,0:28:3.01:33,3,0	1/1:14,0:14:6.39:104,6,0	0/0:41,0:41:84.28:0,84,1290	1/1:20,0:20:8.59:77,9,0	0/0:39,0:39:72.24:0,72,1129	0/0:35,0:35:78.27:0,78,1210	1/1:16,0:17:2.77:22,3,0	1/1:10,0:10:2.99:24,3,0	1/1:8,4:12:9.03:213,9,0	1/1:20,9:29:48.61:1002,49,0	1/1:8,5:13:5.94:142,6,0	0/1:9,0:17:0:0,0,0	0/0:22,0:22:42.14:0,42,654	0/0:13,0:13:12.04:0,12,181	1/1:10,0:10:4.58:38,5,0	0/0:32,0:32:13.42:0,13,882	1/1:7,11:19:21.07:484,21,0	0/0:17,0:17:39.13:0,39,603
chr10	89029346	.	A	AC	741.08	PASS	AB=0.801;AC=8;AF=0.143;AN=56;BaseQRankSum=7.703;DP=684;FS=38.810;HRun=0;HaplotypeScore=204.7426;InbreedingCoeff=-0.1857;MQ=60.43;MQ0=6;MQRankSum=-8.636;QD=4.26;ReadPosRankSum=-3.741;VQSLOD=1.0989;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,7:22:55.62:56,0,384	0/1:5,1:6:35.92:36,0,114	0/0:14,0:11:33.11:0,33,462	0/0:6,0:5:6.01:0,6,81	0/0:29,4:32:32.85:0,33,440	0/1:18,5:23:53.99:54,0,412	0/1:15,1:14:16.08:16,0,401	0/0:52,2:51:99:0,151,2098	0/0:22,2:24:4.72:0,5,605	0/1:33,13:46:99:487,0,1208	0/0:21,6:27:3:0,3,624	0/1:20,6:26:34.58:35,0,512	0/0:30,0:30:86.50:0,87,1190	0/0:22,4:26:41.68:0,42,529	0/0:43,0:42:99:0,126,1746	0/0:28,0:28:84.26:0,84,1167	0/1:10,9:18:33.73:34,0,207	0/1:11,5:16:99:159,0,263	0/0:23,0:22:63.21:0,63,881	0/0:28,1:29:70.87:0,71,1005	0/0:17,4:21:38.19:0,38,530	0/0:19,0:19:45.06:0,45,585	0/0:21,0:21:48.15:0,48,654	0/0:10,1:10:21.07:0,21,300	0/0:16,2:18:35.53:0,36,406	0/0:32,0:32:96.32:0,96,1342	0/0:29,0:29:75.22:0,75,1036	0/0:22,0:17:51.17:0,51,718
chr10	89029352	.	TGATA	T	847.87	PASS	AB=0.969;AC=16;AF=0.333;AN=48;BaseQRankSum=-5.196;DP=700;FS=1.849;HRun=0;HaplotypeScore=238.9362;InbreedingCoeff=0.3996;MQ=57.95;MQ0=13;MQRankSum=1.667;QD=3.20;ReadPosRankSum=3.207;VQSLOD=2.5844;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:19.59:35,0,20	0/0:6,0:6:5.94:0,6,40	./.	./.	0/0:35,0:34:18.02:0,18,245	0/0:24,0:24:4.33:0,4,24	./.	./.	0/0:23,0:22:3.37:0,3,20	1/1:48,0:47:4.35:62,4,0	1/1:25,3:28:3.01:42,3,0	0/0:27,0:27:14.96:0,15,181	1/1:27,3:29:9.03:131,9,0	0/0:26,0:26:12.84:0,13,84	0/0:36,0:35:20.59:0,21,138	0/1:26,1:26:1.71:181,0,2	0/0:21,0:18:2.44:0,2,9	0/0:18,0:18:4.38:0,4,22	0/1:20,1:20:13.73:38,0,14	0/0:31,0:31:8.86:0,9,58	0/1:25,0:25:10.68:11,0,84	0/0:21,0:21:6.02:0,6,92	0/0:14,0:25:0:0,0,0	1/1:12,0:10:3.01:44,3,0	0/0:19,0:20:14.97:0,15,184	0/0:31,0:31:12.89:0,13,112	1/1:28,2:29:24.04:298,24,0	1/1:17,4:16:12.03:158,12,0
chr10	89029443	.	CAGAT	C	2128.18	PASS	AB=0.942;AC=12;AF=0.222;AN=54;BaseQRankSum=5.407;DP=690;FS=5.721;HRun=0;HaplotypeScore=165.7637;InbreedingCoeff=0.0353;MQ=46.23;MQ0=39;MQRankSum=0.661;QD=9.33;ReadPosRankSum=-3.946;VQSLOD=1.7836;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:26:44.98:0,45,984	0/0:11,0:8:0.29:0,0,17	0/0:26,0:4:11.89:0,12,126	0/0:20,0:4:11.99:0,12,152	0/1:24,2:24:99:262,0,115	./.	0/1:18,3:14:99:294,0,273	0/0:13,0:24:29.75:0,30,219	0/0:24,0:21:39.59:0,40,876	0/0:27,0:24:17.28:0,17,152	0/0:12,0:12:1.71:0,2,22	1/1:14,2:16:5.95:95,6,0	0/0:38,0:35:94.20:0,94,2172	1/1:12,1:12:6:101,6,0	0/0:37,0:34:94.57:0,95,2347	0/0:32,0:29:84.29:0,84,1939	0/0:16,0:14:6.59:0,7,44	0/1:14,2:15:99:134,0,143	0/1:29,1:21:99:292,0,377	0/1:39,1:39:99:391,0,655	0/0:26,0:24:57.67:0,58,1330	0/1:25,1:24:99:218,0,249	0/0:30,0:29:66.21:0,66,1538	0/0:21,0:18:35.95:0,36,755	0/1:15,1:16:9.02:88,0,9	0/0:42,0:36:88.87:0,89,2210	0/1:24,0:23:99:401,0,309	0/0:30,0:27:51.75:0,52,1653
chr10	89032058	.	A	AG	3001.14	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.231;DP=735;FS=16.853;HRun=0;HaplotypeScore=104.8577;InbreedingCoeff=0.9999;MQ=90.04;MQ0=0;MQRankSum=-13.757;QD=37.99;ReadPosRankSum=1.311;VQSLOD=1.9861;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,156,2154	1/1:0,11:11:33.11:457,33,0	0/0:32,0:32:95.31:0,95,1235	0/0:29,0:29:84.26:0,84,1138	0/0:22,0:22:63.19:0,63,862	0/0:21,0:21:60.20:0,60,837	0/0:27,0:27:78.23:0,78,1051	1/1:1,17:18:54.17:763,54,0	0/0:23,0:23:69.22:0,69,950	1/1:0,13:13:39.13:545,39,0	1/1:1,17:18:48.16:646,48,0	0/0:39,0:39:99:0,117,1628	0/0:24,0:24:72.24:0,72,1006	0/0:33,0:33:96.29:0,96,1306	0/0:39,0:39:99:0,117,1636	0/0:32,0:31:96.28:0,96,1305	1/1:0,19:19:54.02:765,54,0	0/0:31,0:31:93.24:0,93,1239	0/0:18,0:18:54.17:0,54,739	0/0:28,0:28:78.26:0,78,1091	0/0:39,0:39:99:0,117,1636	0/0:18,0:18:54.18:0,54,752	0/0:16,0:16:45.15:0,45,629	0/0:33,0:33:96.32:0,96,1342	0/0:23,0:23:69.23:0,69,965	0/0:34,1:35:73.07:0,73,1379	0/0:26,0:24:78.24:0,78,1069	0/0:15,0:15:45.15:0,45,629
chr10	89032061	.	C	CG	2618.65	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.148;DP=740;FS=17.064;HRun=0;HaplotypeScore=106.3574;InbreedingCoeff=0.9999;MQ=88.95;MQ0=0;MQRankSum=-13.909;QD=33.57;ReadPosRankSum=2.056;VQSLOD=2.1718;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,162,2197	1/1:1,11:12:33.11:421,33,0	0/0:30,0:30:86.30:0,86,1153	0/0:29,0:29:84.26:0,84,1141	0/0:23,0:23:66.21:0,66,907	0/0:21,0:21:63.19:0,63,861	0/0:26,0:26:78.25:0,78,1075	1/1:1,17:18:54.16:670,54,0	0/0:22,0:22:66.22:0,66,923	1/1:0,12:12:36.11:442,36,0	1/1:0,17:17:48.15:580,48,0	0/0:39,0:39:99:0,114,1574	0/0:25,0:25:75.25:0,75,1047	0/0:32,0:32:90.29:0,90,1243	0/0:38,0:38:99:0,114,1569	0/0:31,0:30:93.31:0,93,1299	1/1:0,19:19:54.01:682,54,0	0/0:31,0:31:93.31:0,93,1299	0/0:21,0:21:60.18:0,60,806	0/0:28,0:28:81.26:0,81,1116	0/0:39,0:39:99:0,117,1599	0/0:19,0:19:57.18:0,57,779	0/0:18,0:18:51.17:0,51,710	0/0:33,0:33:99:0,99,1344	0/0:23,0:23:69.20:0,69,930	0/0:36,1:37:74.59:0,75,1395	0/0:27,0:25:81.23:0,81,1109	0/0:15,0:15:45.15:0,45,629
chr10	89033310	.	GC	G	2241.95	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=3.679;DP=450;FS=1.513;HRun=8;HaplotypeScore=51.4076;InbreedingCoeff=0.9715;MQ=92.05;MQ0=0;MQRankSum=-1.750;QD=15.79;ReadPosRankSum=2.781;VQSLOD=3.5566;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:54.14:0,54,627	0/0:4,0:4:12.04:0,12,144	0/0:24,0:24:38.33:0,38,570	0/0:19,1:20:45.10:0,45,520	1/1:1,9:10:21:190,21,0	1/1:0,15:15:33.05:318,33,0	1/1:6,15:21:34.77:339,35,0	0/0:8,0:17:16.74:0,17,115	0/0:17,0:17:45.08:0,45,507	0/0:15,0:15:42.11:0,42,480	0/0:4,0:4:11.87:0,12,122	1/1:3,13:16:30.05:290,30,0	0/0:21,0:21:54.10:0,54,605	1/1:1,15:16:29.92:289,30,0	0/0:25,0:25:60.09:0,60,683	0/0:22,0:22:66.18:0,66,776	0/0:27,0:27:62.96:0,63,687	1/1:4,15:19:27.03:261,27,0	1/1:3,4:7:12.01:112,12,0	1/1:2,3:5:9:86,9,0	0/0:35,0:37:92.70:0,93,1041	1/1:0,8:8:18.03:174,18,0	0/0:9,0:9:24.06:0,24,277	0/0:23,0:23:57.09:0,57,638	1/1:2,11:13:24.04:232,24,0	0/0:10,0:10:27.07:0,27,315	1/1:4,8:12:18.02:174,18,0	0/0:8,0:8:18.06:0,18,217
chr10	89035419	.	AC	A	1287.36	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.103;DP=810;FS=18.681;HRun=1;HaplotypeScore=77.7366;InbreedingCoeff=0.9997;MQ=88.36;MQ0=0;MQRankSum=0.071;QD=39.01;ReadPosRankSum=-5.039;VQSLOD=0.7750;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,156,2430	0/0:11,0:11:33.04:0,33,498	0/0:36,0:36:95.82:0,96,1498	0/0:25,0:25:69.17:0,69,975	0/0:39,0:39:99:0,114,1769	0/0:19,0:19:57.19:0,57,909	0/0:22,0:22:66.22:0,66,1050	1/1:0,33:33:99:1382,99,0	0/0:27,0:27:81.26:0,81,1263	0/0:35,0:35:99:0,105,1649	0/0:27,0:27:81.28:0,81,1292	0/0:25,0:25:75.24:0,75,1170	0/0:30,0:30:90.31:0,90,1438	0/0:34,0:34:99:0,102,1630	0/0:44,0:44:99:0,132,2084	0/0:32,0:31:96.33:0,96,1535	0/0:27,0:27:81.28:0,81,1292	0/0:17,0:17:51.17:0,51,800	0/0:16,0:16:45.15:0,45,718	0/0:30,0:30:90.29:0,90,1416	0/0:42,0:43:99:0,126,1988	0/0:28,0:28:84.29:0,84,1339	0/0:24,0:24:69.24:0,69,1101	0/0:34,0:34:99:0,102,1522	0/0:23,0:23:69.22:0,69,1078	0/0:24,0:24:72.25:0,72,1151	0/0:35,0:35:99:0,105,1666	0/0:18,0:18:54.18:0,54,860
chr10	89037041	.	AACACACAC	A	1339.73	PASS	AB=0.781;AC=15;AF=0.278;AN=54;BaseQRankSum=5.114;DP=637;FS=4.183;HRun=0;HaplotypeScore=150.4232;InbreedingCoeff=0.6625;MQ=61.34;MQ0=25;MQRankSum=-5.976;QD=7.83;ReadPosRankSum=-1.355;VQSLOD=1.8577;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:38:33.11:0,33,742	0/0:8,0:8:12.03:0,12,279	./.	0/0:59,0:27:3.01:0,3,38	0/1:13,3:20:0:0,0,0	1/1:6,3:9:6.02:130,6,0	1/1:18,11:33:20.82:285,21,0	0/0:14,0:13:9.03:0,9,142	0/0:18,0:17:18.04:0,18,443	0/0:15,0:19:19.88:0,20,526	0/0:9,0:13:9.03:0,9,351	1/1:13,10:26:11.72:233,12,0	0/0:19,0:20:21.05:0,21,343	1/1:13,5:20:12.14:202,12,0	0/0:17,0:18:18.06:0,18,627	0/0:19,0:19:33.11:0,33,1269	0/0:28,0:29:51.15:0,51,1250	0/1:15,5:19:15.65:291,0,16	0/1:11,1:13:42.55:79,0,43	0/0:11,0:15:27.03:0,27,285	0/0:39,0:42:66.21:0,66,1749	1/1:14,2:17:7.45:77,7,0	0/0:8,0:14:13.49:0,13,159	0/0:26,0:40:44.93:0,45,720	1/1:5,2:9:11.53:215,12,0	0/0:19,0:21:51.17:0,51,1343	0/0:6,0:10:8.02:0,8,54	0/0:14,0:16:28.30:0,28,644
chr10	89037661	.	T	TGTGA	12883.52	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-9.295;DP=1241;FS=45.071;HRun=0;HaplotypeScore=189.5230;InbreedingCoeff=0.8824;MQ=46.78;MQ0=43;MQRankSum=-3.690;QD=19.58;ReadPosRankSum=1.511;VQSLOD=2.3387;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,40:42:24.01:659,24,0	1/1:1,6:8:3.01:82,3,0	0/0:43,0:11:30.04:0,30,466	0/0:52,0:18:36.88:0,37,561	1/1:4,28:29:27.09:736,27,0	1/1:6,19:24:13.92:271,14,0	1/1:6,20:27:24.08:656,24,0	0/1:11,0:8:22.70:186,0,23	1/1:7,49:50:61.41:1547,61,0	1/1:12,44:50:99:2249,105,0	1/1:1,23:22:11.31:328,11,0	1/1:28,42:55:44.23:1160,44,0	0/0:67,0:67:99:0,181,3357	1/1:6,67:61:27.51:761,28,0	0/0:59,1:60:99:0,163,2936	0/0:67,0:67:99:0,192,3582	1/1:15,16:26:20.71:535,21,0	1/1:11,12:20:18.93:695,19,0	1/1:5,9:10:25.90:536,26,0	1/1:13,22:31:22.66:637,23,0	0/0:134,3:136:99:0,348,6420	1/1:9,39:40:11.65:562,12,0	0/0:31,0:30:75.22:0,75,1351	0/0:74,0:74:99:0,183,3444	1/1:7,28:34:30.10:819,30,0	0/0:35,0:34:99:0,99,1851	1/1:5,20:20:17.93:465,18,0	0/0:15,0:15:40.05:0,40,655
chr10	89037696	.	GAGTA	G	53.31	PASS	AB=0.937;AC=4;AF=0.071;AN=56;BaseQRankSum=5.293;DP=1420;FS=0.000;HRun=0;HaplotypeScore=283.9607;InbreedingCoeff=0.2138;MQ=36.41;MQ0=163;MQRankSum=-3.486;QD=0.43;ReadPosRankSum=-3.725;VQSLOD=1.4365;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:35:3.95:0,4,84	0/0:16,0:10:6.48:0,6,87	1/1:38,0:1:1.55:4,2,0	0/0:32,0:2:3.48:0,3,42	0/0:55,0:36:0.71:0,1,2	0/0:30,1:23:2.75:0,3,82	0/0:50,1:44:18.43:0,18,202	0/0:13,0:4:0.47:0,0,1	0/0:47,0:40:19.69:0,20,449	0/0:96,0:65:99:0,170,3732	0/0:28,0:19:2.69:0,3,54	0/0:102,0:74:45.07:0,45,835	0/0:64,0:64:99:0,134,3159	0/0:98,0:80:24.75:0,25,490	0/0:65,0:64:96.79:0,97,2468	0/0:72,0:71:99:0,150,3870	0/0:29,0:21:17.85:0,18,219	0/1:29,4:24:99:126,0,395	0/0:30,0:15:39.13:0,39,967	0/0:43,0:31:6.49:0,6,104	0/0:126,1:116:99:0,219,5289	0/0:63,0:45:9.97:0,10,214	0/0:28,0:26:54.19:0,54,1353	0/0:69,0:68:99:0,112,2832	0/1:52,1:41:7.28:7,0,181	0/0:45,0:40:99:0,111,2614	0/0:39,0:26:26.76:0,27,694	0/0:14,0:11:21.07:0,21,559
chr10	89037849	.	T	TGTGA	4141.19	PASS	AB=0.822;AC=14;AF=0.250;AN=56;BaseQRankSum=-4.466;DP=1464;FS=9.526;HRun=0;HaplotypeScore=295.6322;InbreedingCoeff=-0.2953;MQ=48.38;MQ0=53;MQRankSum=-8.004;QD=5.94;ReadPosRankSum=-0.335;VQSLOD=0.7187;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:46:99:0,111,2047	0/1:13,5:16:99:128,0,470	0/0:37,0:12:33.09:0,33,595	0/0:61,0:20:51.17:0,51,930	0/1:32,8:35:24.04:24,0,1212	0/1:20,4:20:4.34:4,0,549	0/1:70,14:72:99:451,0,2809	0/1:12,0:3:6.47:19,0,6	0/0:60,0:55:99:0,119,2208	0/1:66,22:79:99:1039,0,2928	0/0:24,3:23:47.89:0,48,910	0/1:66,20:70:99:524,0,1792	0/0:71,0:71:99:0,200,3777	0/1:56,21:69:99:138,0,1826	0/0:77,0:76:99:0,182,3402	0/0:64,0:64:99:0,166,3130	0/1:20,14:24:99:444,0,509	0/1:37,12:38:99:542,0,1198	0/1:19,6:20:99:206,0,850	0/0:39,3:37:90.88:0,91,1694	0/0:112,0:112:99:0,295,5467	0/1:37,10:41:99:122,0,1543	0/0:25,0:24:49.44:0,49,932	0/0:67,0:66:99:0,177,3284	0/1:55,9:60:99:175,0,2038	0/0:42,1:42:44.18:0,44,2113	0/1:33,11:39:99:326,0,1165	0/0:31,0:31:87.30:0,87,1671
chr10	89037952	.	GCA	G	266.44	PASS	AB=0.850;AC=6;AF=0.107;AN=56;BaseQRankSum=5.599;DP=1206;FS=0.000;HRun=0;HaplotypeScore=201.2692;InbreedingCoeff=0.5142;MQ=49.70;MQ0=135;MQRankSum=-2.913;QD=6.20;ReadPosRankSum=-2.710;VQSLOD=2.8881;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:93.30:0,93,1793	0/0:15,0:14:23.97:0,24,399	0/0:48,0:5:5:0,5,100	0/0:51,0:7:1.13:0,1,140	0/0:30,0:24:39.12:0,39,708	0/0:18,0:15:21.01:0,21,427	0/0:54,0:45:90.31:0,90,1757	0/1:13,2:3:15.37:15,0,83	0/0:71,0:68:99:0,135,2703	0/0:45,0:35:91.56:0,92,1569	0/0:31,0:26:21.02:0,21,365	0/0:67,0:51:90.12:0,90,1696	0/0:66,0:60:99:0,144,2820	0/0:56,0:48:78.19:0,78,1462	0/0:73,0:70:99:0,153,2951	0/0:63,0:61:99:0,144,2822	0/0:18,0:16:20.14:0,20,403	0/0:36,0:34:70.84:0,71,1500	0/1:7,2:3:51.94:57,0,52	1/1:8,3:9:8.83:117,9,0	0/0:119,0:113:99:0,274,5324	0/0:35,0:29:39.09:0,39,741	0/0:37,0:35:65.85:0,66,1322	0/0:63,0:63:99:0,144,2857	0/0:45,0:39:69.23:0,69,1359	0/0:55,0:50:99:0,150,2809	1/1:4,3:6:18.02:205,18,0	0/0:25,0:24:60.21:0,60,1176
chr10	89037959	.	TGA	T	68.50	PASS	AB=0.824;AC=5;AF=0.089;AN=56;BaseQRankSum=5.584;DP=1197;FS=1.121;HRun=0;HaplotypeScore=195.8150;InbreedingCoeff=0.2782;MQ=47.08;MQ0=149;MQRankSum=-3.714;QD=0.94;ReadPosRankSum=-0.838;VQSLOD=2.7457;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:93.21:0,93,1644	0/0:16,0:15:18.06:0,18,253	0/0:42,0:1:3.01:0,3,56	0/1:49,0:3:6.75:7,0,19	0/0:31,0:23:30.05:0,30,505	0/0:18,0:17:30.01:0,30,510	0/0:56,0:46:72.23:0,72,1353	0/0:16,0:2:5.79:0,6,38	0/0:75,0:72:99:0,150,2686	0/0:36,0:26:50.65:0,51,754	0/0:28,0:24:11.99:0,12,153	0/0:67,0:51:92.72:0,93,1644	0/0:70,0:64:99:0,147,2637	0/0:59,0:52:87.67:0,88,1500	0/0:72,0:69:99:0,153,2818	0/0:69,0:67:99:0,165,2898	0/0:16,0:14:17.53:0,18,241	0/0:34,0:32:75.88:0,76,1453	0/1:9,2:3:48.89:51,0,49	1/1:5,3:6:5.79:49,6,0	0/0:119,0:112:99:0,256,4648	0/0:31,0:26:33.24:0,33,558	0/0:39,0:37:74.66:0,75,1364	0/0:65,0:65:99:0,153,2634	0/0:45,0:40:77.96:0,78,1426	0/0:53,0:47:99:0,132,2310	0/1:2,3:4:7.98:72,0,8	0/0:27,0:26:60.11:0,60,1039
chr10	89037961	.	AGTGTGAGTGAGT	A	1759.75	PASS	AB=0.787;AC=7;AF=0.130;AN=54;BaseQRankSum=6.475;DP=1186;FS=29.681;HRun=0;HaplotypeScore=332.6630;InbreedingCoeff=0.4846;MQ=46.60;MQ0=151;MQRankSum=-6.103;QD=18.14;ReadPosRankSum=0.959;VQSLOD=1.4248;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:87.27:0,87,4033	1/1:6,8:13:6.42:143,6,0	./.	0/0:49,0:2:2.96:0,3,19	0/0:31,0:23:24.07:0,24,1006	0/0:18,0:17:23.46:0,23,1136	0/0:55,0:45:63.22:0,63,2613	0/0:16,0:2:6.02:0,6,116	0/0:72,0:69:99:0,132,6765	0/1:24,11:26:10.68:1055,0,11	0/1:9,18:23:0.05:0,0,0	0/0:65,0:50:70.40:0,70,3483	0/0:72,0:66:99:0,153,7695	0/0:57,0:50:92.66:0,93,4116	0/0:72,0:69:99:0,152,7668	0/0:69,0:67:99:0,150,6880	1/1:10,6:15:21.07:667,21,0	0/0:35,0:33:75.26:0,75,3466	0/0:11,0:3:7.27:0,7,231	0/0:6,0:5:2.59:0,3,41	0/0:118,0:111:99:0,234,11600	0/0:33,0:28:38.73:0,39,1552	0/0:39,0:37:71.89:0,72,3476	0/0:64,0:64:99:0,141,6434	0/0:47,0:42:81.12:0,81,3063	0/0:51,0:45:99:0,108,5045	0/1:5,0:3:19.35:19,0,116	0/0:27,0:26:39.13:0,39,2201
chr10	89038361	.	TATGTGA	T	1719.71	PASS	AB=0.971;AC=16;AF=0.286;AN=56;BaseQRankSum=2.585;DP=1419;FS=4.335;HRun=0;HaplotypeScore=312.4782;InbreedingCoeff=-0.2617;MQ=47.94;MQ0=117;MQRankSum=0.063;QD=2.64;ReadPosRankSum=-5.157;VQSLOD=1.0876;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,133,3849	0/1:33,0:30:99:208,0,1074	0/0:38,0:2:3:0,3,25	0/0:34,0:3:6.02:0,6,105	0/1:30,0:27:30.77:31,0,1147	0/1:29,1:23:43.45:43,0,573	0/0:44,9:45:43.73:0,44,1259	1/1:19,0:10:8.97:70,9,0	0/0:60,0:59:99:0,147,4051	0/1:91,1:82:99:432,0,4291	0/1:27,0:23:99:156,0,397	0/1:66,2:55:99:170,0,1990	0/0:69,0:69:99:0,178,4628	0/1:62,2:46:45.85:46,0,1662	0/0:71,0:71:99:0,171,4754	0/0:58,0:58:99:0,150,3899	0/1:41,4:39:79.69:80,0,1375	0/1:37,3:34:99:154,0,1515	0/1:23,1:7:69.23:69,0,456	0/1:45,2:38:65.89:66,0,1056	0/0:140,0:134:99:0,328,9109	0/1:48,0:40:99:116,0,1058	0/0:31,0:31:77.87:0,78,2105	0/0:64,0:64:99:0,150,4359	0/1:43,4:41:99:183,0,1200	0/0:74,0:74:99:0,208,5508	0/1:38,0:30:57.26:57,0,1272	0/0:16,0:16:48.16:0,48,1422
chr10	89038457	.	TGTGA	T	262.39	PASS	AB=0.824;AC=2;AF=0.037;AN=54;BaseQRankSum=4.292;DP=1289;FS=1.308;HRun=0;HaplotypeScore=236.2949;InbreedingCoeff=-0.0465;MQ=45.55;MQ0=105;MQRankSum=-4.301;QD=6.25;ReadPosRankSum=-2.931;VQSLOD=2.4532;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,108,2706	0/0:20,0:20:27.44:0,27,582	./.	0/0:32,0:3:6.91:0,7,87	0/0:26,0:23:18.05:0,18,416	0/0:26,0:24:9:0,9,235	0/0:32,0:26:30.10:0,30,786	0/1:16,11:19:99:314,0,343	0/0:53,0:52:99:0,108,2703	0/0:78,0:64:99:0,184,4459	0/0:19,0:18:10.28:0,10,239	0/0:68,0:64:74.91:0,75,1883	0/0:76,0:73:99:0,171,4290	0/0:59,0:52:41.90:0,42,901	0/0:75,0:73:99:0,154,3780	0/0:71,0:68:99:0,141,3412	0/0:39,0:28:52.97:0,53,1341	0/0:16,0:13:27.09:0,27,638	0/1:14,1:7:36.47:36,0,316	0/0:40,0:37:32.90:0,33,824	0/0:127,0:119:99:0,268,6527	0/0:43,0:38:24.06:0,24,541	0/0:26,0:26:45.15:0,45,1079	0/0:68,0:65:99:0,117,3017	0/0:31,0:26:21.07:0,21,549	0/0:66,0:63:99:0,184,4594	0/0:40,0:39:75.04:0,75,1901	0/0:23,0:22:55.04:0,55,1251
chr10	89038515	.	TGCGAG	T	881.30	PASS	AB=0.924;AC=15;AF=0.278;AN=54;BaseQRankSum=10.631;DP=1207;FS=13.419;HRun=0;HaplotypeScore=314.4588;InbreedingCoeff=-0.2056;MQ=52.35;MQ0=10;MQRankSum=-3.923;QD=2.19;ReadPosRankSum=-7.333;VQSLOD=0.0634;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,150,4586	0/1:9,0:10:7.09:14,0,7	0/0:37,0:21:52.07:0,52,1433	0/0:50,0:23:39.90:0,40,876	0/1:19,0:21:28.26:28,0,33	0/1:21,1:22:46.13:89,0,46	0/0:32,1:28:6.16:0,6,36	./.	0/0:65,0:65:99:0,179,5481	0/1:47,1:39:66.05:66,0,619	0/1:9,2:8:12.99:28,0,13	0/1:52,4:56:84.76:85,0,160	0/0:90,0:89:99:0,259,7815	0/1:54,5:57:99:292,0,110	0/0:91,0:91:99:0,260,7981	0/0:64,0:63:99:0,190,5896	0/1:15,0:14:65.62:66,0,147	0/1:11,0:9:70.71:71,0,136	0/1:12,0:12:15.62:16,0,200	0/1:33,2:33:52.34:56,0,52	0/0:129,0:128:99:0,364,10940	0/1:47,1:42:35.75:66,0,36	0/0:35,0:35:99:0,99,3108	0/0:67,0:67:99:0,163,5089	1/1:17,1:15:5.87:43,6,0	0/0:62,0:62:99:0,187,5709	0/1:23,0:24:99:119,0,300	0/0:21,0:21:54.19:0,54,1718
chr10	89038520	.	G	GT	2572.58	PASS	AB=0.754;AC=28;AF=0.519;AN=54;BaseQRankSum=15.590;DP=1176;FS=4.008;HRun=0;HaplotypeScore=226.0432;InbreedingCoeff=0.7256;MQ=52.78;MQ0=12;MQRankSum=-10.383;QD=6.45;ReadPosRankSum=-2.411;VQSLOD=2.9974;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,156,2174	1/1:4,6:10:3.48:23,3,0	0/0:37,0:20:47.74:0,48,655	0/0:57,0:26:40.16:0,40,544	1/1:8,18:21:6.02:68,6,0	1/1:4,18:21:14.37:137,14,0	1/1:6,20:20:1.55:26,2,0	./.	0/0:61,0:61:99:0,174,2425	1/1:9,34:33:81.10:777,81,0	1/1:6,5:8:6.01:61,6,0	1/1:12,39:51:21.13:232,21,0	0/0:84,0:83:99:0,247,3392	1/1:7,44:50:38.04:353,38,0	0/0:90,0:90:99:0,249,3432	0/0:73,0:72:99:0,208,2838	0/1:10,7:16:15.63:96,0,16	0/1:9,3:9:50.79:51,0,76	1/1:3,11:13:33.06:331,33,0	1/1:12,23:28:5.21:57,5,0	0/0:126,0:124:99:0,355,4900	1/1:4,36:36:12.02:125,12,0	0/0:36,0:36:99:0,105,1432	0/0:65,0:65:99:0,160,2219	1/1:2,14:14:4.23:31,4,0	0/0:63,1:64:99:0,157,2499	1/1:8,17:24:41.62:410,42,0	0/0:21,0:21:54.18:0,54,755
chr10	89038521	.	A	AT	3114.32	PASS	AB=0.778;AC=29;AF=0.537;AN=54;BaseQRankSum=15.489;DP=1218;FS=7.788;HRun=0;HaplotypeScore=226.5501;InbreedingCoeff=0.8388;MQ=52.19;MQ0=12;MQRankSum=-12.019;QD=7.23;ReadPosRankSum=-4.145;VQSLOD=1.5859;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,156,2141	1/1:5,6:11:7.30:52,7,0	0/0:38,0:21:50.72:0,51,687	0/0:57,0:26:56.82:0,57,632	1/1:9,18:22:6.01:68,6,0	1/1:5,19:21:14.70:138,15,0	1/1:9,21:23:5.26:55,5,0	./.	0/0:61,0:61:99:0,174,2407	1/1:11,35:36:90.10:858,90,0	1/1:4,7:8:6.01:61,6,0	1/1:4,43:56:32.06:287,32,0	0/0:86,0:85:99:0,244,3386	1/1:6,49:54:44.43:432,44,0	0/0:86,0:86:99:0,249,3432	0/0:75,0:74:99:0,211,2880	1/1:12,7:17:15.55:179,16,0	0/1:10,3:11:63.15:91,0,63	1/1:4,11:14:33.06:332,33,0	1/1:12,25:30:16.92:155,17,0	0/0:128,0:125:99:0,352,4845	1/1:6,37:38:9.91:101,10,0	0/0:35,0:35:99:0,102,1425	0/0:69,0:68:99:0,160,2203	1/1:2,15:15:5.66:40,6,0	0/0:63,1:64:99:0,157,2529	1/1:8,18:24:45.11:479,45,0	0/0:21,0:21:54.18:0,54,755
chr10	89046094	.	GCACAACACA	G	1750.42	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.311;DP=1339;FS=20.980;HRun=0;HaplotypeScore=448.4919;InbreedingCoeff=0.9809;MQ=55.80;MQ0=19;MQRankSum=-4.596;QD=44.88;ReadPosRankSum=-4.556;VQSLOD=2.2413;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,123,5882	0/0:20,0:20:51.17:0,51,2012	0/0:64,0:30:43.86:0,44,1438	0/0:81,0:33:14.10:0,14,1095	0/0:45,0:44:99:0,103,3618	0/0:24,0:24:66.16:0,66,2665	0/0:45,0:45:99:0,108,3789	1/1:10,29:37:75.23:1845,75,0	0/0:44,0:44:99:0,126,5521	0/0:58,0:56:99:0,135,5839	0/0:29,0:29:71.60:0,72,2805	0/0:76,0:73:99:0,174,5723	0/0:50,0:50:99:0,138,5864	0/0:64,0:63:99:0,161,5893	0/0:65,0:65:99:0,169,7037	0/0:49,0:49:99:0,126,5529	0/0:37,0:35:73.89:0,74,2869	0/0:32,0:31:74.05:0,74,2784	0/0:20,0:20:57.20:0,57,1985	0/0:43,0:43:99:0,118,4404	0/0:100,0:99:99:0,278,11687	0/0:57,0:55:99:0,142,5480	0/0:49,0:49:99:0,120,5240	0/0:75,0:75:99:0,211,8718	0/0:29,0:29:72.63:0,73,2512	0/0:36,0:36:99:0,102,4395	0/0:34,0:33:98.31:0,98,3894	0/0:16,0:16:42.14:0,42,1923
chr10	89046135	.	ACACACATACACAT	A	16745.10	PASS	AB=0.721;AC=16;AF=0.286;AN=56;BaseQRankSum=19.433;DP=1390;FS=0.549;HRun=0;HaplotypeScore=547.0250;InbreedingCoeff=-0.4000;MQ=57.16;MQ0=14;MQRankSum=-15.238;QD=24.09;ReadPosRankSum=2.817;VQSLOD=1.1812;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:50:56.47:0,56,7048	0/1:10,11:21:99:607,0,881	0/0:71,0:41:90.50:0,91,3341	0/0:56,0:29:58.06:0,58,1919	0/1:22,23:44:99:1228,0,931	0/1:16,10:26:99:868,0,1238	0/1:22,32:53:99:922,0,1369	0/1:52,0:44:99:437,0,1464	0/0:56,0:56:99:0,148,7996	0/1:50,0:48:99:593,0,1924	0/1:13,17:30:99:690,0,1036	0/1:29,47:73:99:3339,0,1541	0/0:44,0:44:99:0,113,6550	0/1:48,18:64:99:2611,0,2158	0/0:76,0:76:99:0,174,11327	0/0:49,0:49:99:0,138,8007	0/1:18,20:36:99:342,0,1184	0/1:16,30:45:99:183,0,706	0/1:26,9:33:99:544,0,1371	0/1:19,19:38:99:1387,0,1132	0/0:114,0:113:99:0,241,16841	0/1:29,16:43:99:1365,0,1794	0/0:46,0:46:99:0,126,6874	0/0:77,0:75:99:0,208,11599	0/1:17,14:30:99:840,0,1163	0/0:44,0:44:99:0,126,7593	0/1:22,20:42:99:790,0,1700	0/0:12,0:12:36.12:0,36,2071
chr10	89046148	.	T	TCACAACACACACAA	40131.86	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=16.567;DP=1336;FS=8.195;HRun=0;HaplotypeScore=487.6353;InbreedingCoeff=0.9877;MQ=58.21;MQ0=10;MQRankSum=-16.178;QD=64.01;ReadPosRankSum=-2.054;VQSLOD=4.0140;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:59:19.79:0,20,3804	1/1:21,0:21:28.34:1386,28,0	0/0:66,0:43:50.72:0,51,1783	0/0:61,0:33:43.97:0,44,1038	1/1:39,0:38:78.02:2780,78,0	1/1:25,0:25:51.13:2108,51,0	1/1:45,0:44:48:1783,48,0	1/1:51,0:46:99:2462,102,0	0/0:50,0:50:99:0,125,4237	1/1:9,32:45:84.19:3067,84,0	1/1:29,0:29:50.79:1521,51,0	1/1:72,0:70:99:6521,156,0	0/0:44,0:45:99:0,111,3679	1/1:65,1:64:99:5437,147,0	0/0:75,0:74:99:0,178,6045	0/0:48,0:48:99:0,120,4226	1/1:32,0:30:7.47:885,7,0	1/1:43,0:42:23.72:510,24,0	1/1:23,0:20:36.10:1228,36,0	1/1:31,0:31:69.88:2722,70,0	0/0:115,0:115:99:0,170,8491	1/1:37,0:35:75.17:3167,75,0	0/0:49,0:49:99:0,114,3862	0/0:81,0:79:99:0,196,6783	1/1:29,0:28:54.19:2415,54,0	0/0:46,0:46:99:0,114,4122	1/1:37,0:37:57.15:2140,57,0	0/0:12,0:12:33.11:0,33,1267
chr10	89046161	.	AGAGCAAAC	A	9429.34	PASS	AB=0.858;AC=16;AF=0.286;AN=56;BaseQRankSum=12.315;DP=1314;FS=23.153;HRun=0;HaplotypeScore=440.6563;InbreedingCoeff=-0.4000;MQ=58.39;MQ0=9;MQRankSum=-13.547;QD=15.64;ReadPosRankSum=-5.527;VQSLOD=1.3487;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:57:99:0,142,6798	0/1:15,3:18:99:325,0,691	0/0:61,0:35:63.94:0,64,3183	0/0:69,0:31:65.38:0,65,2064	0/1:35,8:42:99:734,0,2203	0/1:19,4:26:99:591,0,931	0/1:40,3:44:99:359,0,888	0/1:36,13:44:99:963,0,1876	0/0:52,0:52:99:0,150,6465	0/1:42,0:41:99:598,0,2486	0/1:23,3:26:99:423,0,1639	0/1:58,13:74:99:1440,0,2500	0/0:44,0:44:99:0,132,5702	0/1:48,9:59:99:992,0,4181	0/0:73,0:73:99:0,195,9362	0/0:46,0:46:99:0,135,6010	0/1:30,0:29:39.76:40,0,1247	0/1:41,0:41:99:206,0,1154	0/1:16,4:19:99:185,0,1613	0/1:26,5:31:99:417,0,2118	0/0:116,0:115:99:0,323,14282	0/1:25,7:31:99:741,0,1336	0/0:42,0:42:99:0,123,5466	0/0:84,0:82:99:0,226,10345	0/1:19,9:29:99:860,0,578	0/0:52,0:52:99:0,157,6914	0/1:25,5:30:99:554,0,738	0/0:11,0:11:33.11:0,33,1485
chr10	89049028	.	C	CCCTA	11606.41	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=-4.230;DP=766;FS=9.398;HRun=0;HaplotypeScore=139.9344;InbreedingCoeff=0.7854;MQ=68.42;MQ0=3;MQRankSum=-5.960;QD=22.80;ReadPosRankSum=-1.269;VQSLOD=3.9445;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,22:40:0.79:1010,1,0	1/1:7,0:12:17.90:212,18,0	0/0:29,0:25:3.01:0,3,42	0/1:26,0:24:3.46:3,0,287	1/1:10,6:17:18.06:428,18,0	1/1:10,16:26:45.15:1071,45,0	1/1:17,8:27:24.08:552,24,0	0/0:26,0:25:21.01:0,21,245	1/1:17,0:35:45.15:781,45,0	1/1:16,0:28:33.11:618,33,0	1/1:11,0:18:9.02:142,9,0	1/1:13,16:30:48.16:1126,48,0	0/0:33,0:33:66.22:0,66,1021	1/1:11,17:31:57.20:1349,57,0	0/0:34,0:34:66.22:0,66,1019	0/0:36,0:36:78.26:0,78,1206	1/1:18,1:31:23.67:358,24,0	1/1:7,11:19:30.10:714,30,0	1/1:19,0:26:22.89:490,23,0	1/1:16,1:28:25.88:356,26,0	0/0:35,0:35:69.21:0,69,1043	1/1:11,18:29:9.85:1235,10,0	0/0:25,0:24:39.12:0,39,590	0/0:30,0:30:54.14:0,54,825	1/1:13,16:29:39.13:928,39,0	0/1:28,0:28:24.41:24,0,594	1/1:19,0:29:12.04:209,12,0	0/0:9,0:9:21.07:0,21,331
chr10	89052032	.	T	TC	2109.06	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-1.536;DP=644;FS=9.871;HRun=9;HaplotypeScore=79.9457;InbreedingCoeff=0.9687;MQ=78.07;MQ0=2;MQRankSum=-1.370;QD=13.35;ReadPosRankSum=-4.586;VQSLOD=1.7013;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:89.95:0,90,774	1/1:2,4:6:9.02:100,9,0	0/0:20,1:18:24.77:0,25,222	0/0:27,0:25:13.15:0,13,310	0/0:20,0:20:53.94:0,54,461	0/0:24,0:24:59.97:0,60,521	0/0:31,0:31:74.93:0,75,645	1/1:13,17:30:42.06:436,42,0	0/0:33,0:33:86.92:0,87,743	1/1:7,10:17:30.07:322,30,0	1/1:2,12:14:24.06:260,24,0	0/0:23,0:23:59.98:0,60,518	0/0:21,0:21:53.97:0,54,464	0/0:24,0:24:65.97:0,66,572	0/0:29,0:29:68.92:0,69,589	0/0:35,0:35:95:0,95,810	1/1:8,31:39:49.15:770,49,0	0/0:31,0:31:77.95:0,78,673	1/1:9,0:23:43.55:264,44,0	1/1:2,1:13:20.05:106,20,0	0/0:39,0:39:99:0,114,982	0/0:15,0:15:41.83:0,42,353	0/0:16,0:16:39.21:0,39,375	0/0:17,0:19:40.06:0,40,324	0/0:16,0:16:41.99:0,42,365	0/0:23,0:23:62.92:0,63,532	1/1:5,0:15:11.27:55,11,0	0/0:3,0:3:9:0,9,78
chr10	89052649	.	AT	A	3165.10	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.298;DP=706;FS=5.863;HRun=3;HaplotypeScore=73.6574;InbreedingCoeff=0.9965;MQ=89.46;MQ0=0;MQRankSum=-2.353;QD=31.34;ReadPosRankSum=-1.320;VQSLOD=2.9647;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,47:49:99:1487,120,0	0/0:6,0:6:17.99:0,18,234	0/0:36,0:36:89.89:0,90,1153	0/0:20,0:20:41.02:0,41,562	0/0:22,0:22:63.20:0,63,887	0/0:27,0:27:78.25:0,78,1103	0/0:35,0:35:99:0,105,1438	1/1:0,33:33:99:1189,99,0	1/1:0,19:19:51.16:632,51,0	0/0:29,0:29:78.26:0,78,1120	0/0:10,0:10:30.10:0,30,431	0/0:27,0:27:75.23:0,75,1031	0/0:31,0:31:93.28:0,93,1309	0/0:32,0:32:93.27:0,93,1314	0/0:36,0:36:99:0,108,1500	0/0:28,0:28:84.25:0,84,1157	0/0:32,0:32:93.30:0,93,1318	0/0:25,0:25:72.24:0,72,1035	0/0:16,0:16:48.14:0,48,654	0/0:20,0:20:54.18:0,54,776	0/0:31,0:31:93.27:0,93,1314	0/0:22,0:22:60.19:0,60,846	0/0:22,0:22:63.21:0,63,897	0/0:25,0:25:75.24:0,75,1063	0/0:25,0:25:75.24:0,75,1063	0/0:20,0:20:60.20:0,60,859	0/0:19,0:19:54.18:0,54,775	0/0:9,0:9:27.09:0,27,387
chr10	89054382	.	GA	G	1042.42	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.024;DP=711;FS=0.712;HRun=3;HaplotypeScore=66.3781;InbreedingCoeff=0.9663;MQ=86.66;MQ0=0;MQRankSum=-3.004;QD=37.23;ReadPosRankSum=-3.688;VQSLOD=2.5755;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,2194	0/0:7,0:7:21.07:0,21,336	0/0:23,0:23:69.22:0,69,1063	0/0:24,0:24:69.22:0,69,1049	0/0:28,0:27:81.28:0,81,1289	0/0:27,0:27:81.26:0,81,1269	0/0:32,0:32:96.31:0,96,1509	1/1:0,28:28:84.25:1137,84,0	0/0:23,0:23:69.24:0,69,1098	0/0:31,0:31:93.31:0,93,1468	0/0:19,0:19:54.17:0,54,828	0/0:18,0:18:54.18:0,54,861	0/0:36,0:36:99:0,108,1702	0/0:22,0:22:66.23:0,66,1055	0/0:35,0:35:99:0,105,1647	0/0:36,0:36:99:0,108,1701	0/0:23,0:23:69.24:0,69,1099	0/0:23,0:23:69.24:0,69,1099	0/0:32,0:32:96.33:0,96,1532	0/0:30,0:30:87.28:0,87,1363	0/0:30,0:30:90.31:0,90,1436	0/0:11,0:11:33.11:0,33,528	0/0:17,0:17:48.16:0,48,767	0/0:22,0:22:66.22:0,66,1048	0/0:18,0:18:51.17:0,51,812	0/0:28,0:28:84.29:0,84,1341	0/0:37,0:37:99:0,111,1772	0/0:4,0:4:12.04:0,12,192
chr10	89055993	.	AAAAGAG	A	109.17	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=3.489;DP=541;FS=0.965;HRun=0;HaplotypeScore=112.8620;InbreedingCoeff=0.3005;MQ=71.75;MQ0=25;MQRankSum=0.368;QD=1.73;ReadPosRankSum=-0.462;VQSLOD=2.2530;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:26:3.01:71,3,0	0/0:11,0:10:7.97:0,8,220	0/1:26,0:13:7.57:8,0,108	0/0:49,0:24:35.46:0,35,342	0/0:26,0:26:66.90:0,67,717	0/0:18,0:17:41.81:0,42,451	0/0:11,0:11:25.26:0,25,220	0/0:48,0:47:99:0,134,1198	0/1:10,0:9:19.98:128,0,20	0/0:21,0:21:59.57:0,60,544	0/0:14,0:14:32.76:0,33,283	0/0:16,0:15:45.03:0,45,531	0/0:19,0:18:53.98:0,54,552	0/0:12,0:11:33.01:0,33,347	0/0:27,0:26:75.02:0,75,842	0/0:16,0:16:45.73:0,46,390	0/0:15,0:15:8.11:0,8,176	0/0:18,0:18:28.69:0,29,447	0/0:12,0:12:29.76:0,30,297	0/0:17,0:16:45.46:0,45,450	0/0:14,0:13:35.92:0,36,355	0/0:15,0:14:35.51:0,36,333	0/0:15,0:15:36.02:0,36,389	0/0:16,0:16:25.63:0,26,261	0/0:15,0:13:32.81:0,33,284	0/0:25,0:25:72.01:0,72,768	0/0:15,0:14:38.98:0,39,341	0/0:8,0:5:11.37:0,11,88
chr10	89055995	.	AAGAGAGAGAG	A	30.99	PASS	AB=0.958;AC=6;AF=0.115;AN=52;BaseQRankSum=2.406;DP=568;FS=7.677;HRun=0;HaplotypeScore=153.6259;InbreedingCoeff=0.3383;MQ=68.54;MQ0=26;MQRankSum=-3.292;QD=0.24;ReadPosRankSum=0.050;VQSLOD=2.1431;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:2.60:0,3,10	0/1:10,0:10:13.96:29,0,14	0/0:24,0:11:0.47:0,0,1	0/1:49,0:24:0:0,0,0	0/0:28,0:28:15.05:0,15,305	0/0:21,0:20:9.03:0,9,155	0/0:13,0:12:0:0,0,0	1/1:48,0:47:2.50:9,2,0	0/0:11,0:10:6.49:0,6,137	0/0:22,0:22:4.56:0,5,40	./.	0/0:15,0:15:9.03:0,9,210	0/0:21,0:20:12.03:0,12,239	0/0:13,0:12:9.02:0,9,172	0/0:29,0:28:11.15:0,11,322	0/0:17,0:17:5.92:0,6,109	1/1:12,6:18:2.43:88,2,0	0/0:19,0:19:25.31:0,25,490	0/0:15,0:15:13.86:0,14,210	0/0:19,0:18:9.50:0,10,173	0/0:15,0:13:12.04:0,12,245	0/0:15,0:14:6.02:0,6,135	0/0:17,0:17:6.02:0,6,145	0/0:19,0:17:9.03:0,9,165	0/0:15,0:12:9.02:0,9,121	0/0:25,0:25:27.07:0,27,460	0/0:16,0:15:2.99:0,3,24	./.
chr10	89056168	.	T	TGA	1008.41	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.329;DP=609;FS=20.257;HRun=0;HaplotypeScore=77.4377;InbreedingCoeff=0.9918;MQ=83.70;MQ0=1;MQRankSum=-0.207;QD=37.35;ReadPosRankSum=-4.286;VQSLOD=2.4525;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1346	0/0:6,0:6:18.02:0,18,215	0/0:21,0:19:40.93:0,41,520	0/0:29,0:29:48.72:0,49,637	0/0:25,0:25:69.23:0,69,966	0/0:21,0:21:57.18:0,57,780	0/0:20,0:20:57.13:0,57,745	1/1:4,23:27:66.19:1103,66,0	0/0:23,0:23:66.19:0,66,890	0/0:24,0:24:69.22:0,69,952	0/0:18,0:18:48.11:0,48,634	0/0:14,0:14:39.12:0,39,531	0/0:18,0:18:51.16:0,51,697	0/0:14,0:14:39.08:0,39,478	0/0:27,0:27:72.23:0,72,992	0/0:22,0:22:60.20:0,60,840	0/0:32,0:32:96.32:0,96,1344	0/0:16,0:16:48.16:0,48,672	0/0:26,0:26:75.25:0,75,1050	0/0:16,0:16:45.15:0,45,630	0/0:40,0:40:99:0,108,1455	0/0:18,0:18:54.18:0,54,755	0/0:20,0:20:60.18:0,60,806	0/0:18,0:18:51.17:0,51,714	0/0:23,0:23:60.18:0,60,808	0/0:21,0:21:57.17:0,57,753	0/0:18,0:18:45.15:0,45,630	0/0:16,0:16:48.16:0,48,672
chr10	89056324	.	G	GA	2747.99	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.521;DP=804;FS=12.414;HRun=4;HaplotypeScore=93.0434;InbreedingCoeff=0.9979;MQ=83.28;MQ0=0;MQRankSum=-1.402;QD=37.14;ReadPosRankSum=1.765;VQSLOD=2.5520;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,44:46:99:1723,126,0	0/0:7,0:7:21.06:0,21,238	0/0:23,0:23:51.08:0,51,546	0/0:29,0:28:76.10:0,76,811	0/0:42,0:42:99:0,111,1248	0/0:25,0:25:75.21:0,75,851	0/0:31,0:31:90.21:0,90,990	0/0:26,0:26:66.17:0,66,734	1/1:0,28:28:84.28:1146,84,0	0/0:31,0:31:90.26:0,90,1020	0/0:16,0:16:45.13:0,45,510	0/0:35,0:35:93.23:0,93,1033	0/0:33,0:33:81.22:0,81,916	0/0:24,0:24:69.20:0,69,782	0/0:34,0:34:96.26:0,96,1079	0/0:31,0:31:93.25:0,93,1044	0/0:29,0:29:78.10:0,78,826	0/0:31,0:31:87.22:0,87,974	0/0:26,0:26:72.20:0,72,807	0/0:26,0:26:72.20:0,72,816	0/0:55,0:55:99:0,156,1770	0/0:32,0:32:87.25:0,87,987	0/0:23,0:23:63.16:0,63,703	0/0:27,0:27:81.12:0,81,861	0/0:27,0:27:75.19:0,75,839	0/0:21,0:21:60.17:0,60,680	0/0:28,0:26:81.23:0,81,918	0/0:18,0:18:51.15:0,51,578
chr10	89057527	.	T	TTCCA	1469.94	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.125;DP=729;FS=4.151;HRun=0;HaplotypeScore=119.1282;InbreedingCoeff=0.9990;MQ=86.28;MQ0=0;MQRankSum=-6.372;QD=61.25;ReadPosRankSum=-4.020;VQSLOD=4.3777;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,162,3238	0/0:9,0:9:27.09:0,27,566	0/0:23,0:23:69.20:0,69,1306	0/0:29,0:29:81.28:0,81,1576	0/0:25,0:25:72.25:0,72,1508	0/0:32,0:32:96.31:0,96,1973	0/0:27,0:27:78.25:0,78,1584	1/1:4,19:24:66.17:1565,66,0	0/0:17,0:17:48.16:0,48,1006	0/0:24,0:24:72.25:0,72,1497	0/0:19,0:19:57.19:0,57,1158	0/0:27,0:27:81.26:0,81,1648	0/0:22,0:22:66.23:0,66,1382	0/0:18,0:18:54.19:0,54,1119	0/0:34,0:34:99:0,99,1999	0/0:29,0:28:87.30:0,87,1809	0/0:35,0:35:99:0,105,2113	0/0:16,0:16:48.16:0,48,1006	0/0:25,0:25:72.25:0,72,1508	0/0:22,0:22:63.22:0,63,1309	0/0:24,0:24:72.23:0,72,1470	0/0:28,0:28:84.29:0,84,1740	0/0:21,0:21:63.22:0,63,1317	0/0:32,0:32:96.31:0,96,1956	0/0:31,0:31:93.32:0,93,1949	0/0:35,0:35:99:0,102,2089	0/0:31,0:30:90.24:0,90,1729	0/0:15,0:15:45.13:0,45,868
chr10	89058244	.	CTT	C	662.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.413;DP=588;FS=30.599;HRun=4;HaplotypeScore=74.4480;InbreedingCoeff=0.9677;MQ=82.91;MQ0=0;MQRankSum=-4.714;QD=31.57;ReadPosRankSum=-3.937;VQSLOD=1.0495;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.26:0,75,1404	0/0:9,0:9:27.09:0,27,506	0/0:14,0:14:39.03:0,39,730	0/0:21,0:21:63.02:0,63,927	0/0:19,0:19:54.17:0,54,946	0/0:14,0:14:42.09:0,42,721	0/0:32,0:32:93.31:0,93,1713	1/1:1,20:21:57.12:758,57,0	0/0:14,0:14:42.13:0,42,751	0/0:21,0:21:63.21:0,63,1149	0/0:4,0:4:12.04:0,12,225	0/0:29,0:29:87.28:0,87,1562	0/0:18,0:18:54.15:0,54,885	0/0:30,0:30:87.30:0,87,1608	0/0:38,0:38:99:0,111,1974	0/0:31,0:31:93.31:0,93,1706	0/0:26,0:26:72.25:0,72,1334	0/0:29,0:29:84.25:0,84,1493	0/0:9,0:9:27.09:0,27,502	0/0:14,0:14:36.12:0,36,674	0/0:22,0:22:66.21:0,66,1177	0/0:20,0:20:54.17:0,54,981	0/0:18,0:18:48.16:0,48,876	0/0:40,0:40:99:0,120,2176	0/0:16,0:16:48.16:0,48,897	0/0:21,0:21:63.20:0,63,1120	0/0:20,0:20:60.18:0,60,1057	0/0:10,0:10:30.10:0,30,562
chr10	89058296	.	C	CG	2110.10	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-7.765;DP=556;FS=0.499;HRun=7;HaplotypeScore=66.2409;InbreedingCoeff=0.9683;MQ=81.21;MQ0=0;MQRankSum=-4.738;QD=21.31;ReadPosRankSum=0.491;VQSLOD=3.0567;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,21:26:54.17:652,54,0	1/1:2,5:7:9.02:99,9,0	0/0:16,0:16:34.28:0,34,316	0/0:19,0:19:32.80:0,33,350	0/0:14,0:14:30.04:0,30,290	0/0:16,0:16:33.04:0,33,319	0/0:32,0:32:81.11:0,81,776	0/0:17,0:17:10.38:0,10,72	1/1:2,14:17:42.11:494,42,0	1/1:5,14:19:36.11:433,36,0	1/1:0,10:10:15.05:181,15,0	0/0:25,0:25:54.04:0,54,510	0/0:34,0:34:90.13:0,90,868	0/0:21,0:21:54.08:0,54,521	0/0:31,0:31:72.10:0,72,695	0/0:16,0:16:39.04:0,39,371	1/1:3,17:20:36.11:435,36,0	0/0:28,0:28:78.12:0,78,753	0/0:15,0:15:36.05:0,36,345	0/0:11,0:11:21.02:0,21,202	0/0:40,0:40:99:0,111,1066	0/0:18,0:18:48.08:0,48,463	0/0:7,0:7:18.03:0,18,174	0/0:39,0:39:99:0,105,1004	0/0:11,0:11:30.05:0,30,290	0/0:19,1:20:15.13:0,15,427	0/0:21,0:21:60.09:0,60,579	0/0:6,0:6:18.03:0,18,174
chr10	89060131	.	CT	C	2766.15	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=13.334;DP=767;FS=5.079;HRun=1;HaplotypeScore=82.8300;InbreedingCoeff=1.0000;MQ=92.09;MQ0=0;MQRankSum=-5.216;QD=36.88;ReadPosRankSum=3.081;VQSLOD=4.2214;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,49:49:99:1842,132,0	0/0:14,0:14:42.13:0,42,648	0/0:33,0:33:96.26:0,96,1445	0/0:30,0:30:87.20:0,87,1271	0/0:21,0:21:60.20:0,60,959	0/0:16,0:16:48.16:0,48,765	0/0:51,0:51:99:0,154,2418	0/0:33,0:33:99:0,99,1525	1/1:0,26:26:75.25:1045,75,0	0/0:32,0:32:96.33:0,96,1535	0/0:20,0:20:60.20:0,60,959	0/0:29,0:29:87.26:0,87,1320	0/0:29,0:29:87.30:0,87,1388	0/0:23,0:23:69.24:0,69,1100	0/0:26,0:26:78.24:0,78,1201	0/0:17,0:17:51.17:0,51,815	0/0:25,0:25:75.19:0,75,1122	0/0:16,0:16:45.15:0,45,719	0/0:25,0:25:75.24:0,75,1156	0/0:28,0:28:81.28:0,81,1294	0/0:33,0:33:96.27:0,96,1482	0/0:27,0:27:81.26:0,81,1271	0/0:17,0:17:51.17:0,51,815	0/0:26,0:26:78.27:0,78,1241	0/0:34,0:34:99:0,102,1599	0/0:33,0:33:99:0,99,1563	0/0:32,0:32:96.33:0,96,1534	0/0:22,0:22:66.19:0,66,1005
chr10	89060445	.	TAA	T	1178.98	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=10.612;DP=690;FS=3.672;HRun=10;HaplotypeScore=88.5366;InbreedingCoeff=0.7455;MQ=75.29;MQ0=0;MQRankSum=-1.144;QD=17.09;ReadPosRankSum=-0.950;VQSLOD=2.4677;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:31:72.16:791,72,0	0/0:12,0:12:33.10:0,33,502	0/1:18,0:18:15.41:15,0,429	0/0:10,1:12:5.69:0,6,59	0/0:26,0:29:78.23:0,78,1146	0/0:22,0:22:60.20:0,60,952	0/0:28,0:28:78.27:0,78,1236	0/0:35,0:35:90.30:0,90,1405	1/1:2,18:20:45.11:502,45,0	0/0:33,0:33:78.24:0,78,1156	0/0:19,0:21:63.20:0,63,959	0/0:24,0:25:68.72:0,69,1055	0/0:20,0:22:56.16:0,56,823	0/0:26,0:26:69.22:0,69,1071	0/0:21,0:21:60.19:0,60,929	0/0:27,1:28:44.80:0,45,1133	0/0:28,0:30:83.23:0,83,1212	0/0:28,0:28:81.28:0,81,1282	0/0:19,0:20:47.65:0,48,721	0/0:30,0:31:81.25:0,81,1220	0/0:18,0:18:51.17:0,51,788	0/0:22,0:22:63.20:0,63,979	0/0:25,0:25:66.18:0,66,1016	0/0:33,0:35:92.94:0,93,1342	0/0:31,0:31:93.30:0,93,1433	0/0:32,0:33:89.79:0,90,1388	0/0:28,0:27:78.26:0,78,1214	0/0:6,0:6:18.06:0,18,286
chr10	89060937	.	TACCTCCAAAGCC	T	1261.48	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.323;DP=621;FS=6.859;HRun=0;HaplotypeScore=214.5884;InbreedingCoeff=0.9678;MQ=88.45;MQ0=0;MQRankSum=-5.045;QD=25.23;ReadPosRankSum=1.856;VQSLOD=2.2225;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,24:36:30.10:986,30,0	0/0:9,0:9:27.09:0,27,1120	0/0:33,0:30:47.34:0,47,1581	0/0:30,0:26:56.03:0,56,1734	0/0:13,0:13:24.08:0,24,1067	0/0:19,0:19:42.10:0,42,1588	0/0:30,0:30:78.26:0,78,3381	0/0:17,0:17:33.10:0,33,1023	1/1:4,10:14:11.87:392,12,0	0/0:14,0:14:30.10:0,30,1463	0/0:13,0:13:22.32:0,22,1157	0/0:28,0:28:57.18:0,57,2609	0/0:21,0:21:45.15:0,45,2466	0/0:17,0:17:45.14:0,45,1964	0/0:24,0:24:51.17:0,51,2673	0/0:26,0:26:57.20:0,57,2491	0/0:36,0:36:87.30:0,87,4697	0/0:41,0:40:99:0,105,5043	0/0:15,0:15:24.08:0,24,1049	0/0:16,0:16:30.10:0,30,1392	0/0:46,0:46:99:0,120,5825	0/0:11,0:11:21.03:0,21,974	0/0:8,0:8:15.05:0,15,648	0/0:34,0:34:78.18:0,78,3791	0/0:12,0:12:30.10:0,30,1732	0/0:20,0:20:51.18:0,51,2418	0/0:22,0:22:51.18:0,51,2676	0/0:16,0:16:42.09:0,42,2053
chr10	89061979	.	C	CAGT	3868.69	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.865;DP=691;FS=2.292;HRun=0;HaplotypeScore=95.3655;InbreedingCoeff=0.9998;MQ=77.87;MQ0=0;MQRankSum=-3.784;QD=45.51;ReadPosRankSum=-2.587;VQSLOD=4.6254;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:44.32:980,44,0	0/0:18,0:18:48.16:0,48,761	0/0:22,0:22:51.14:0,51,736	0/0:16,0:16:31.47:0,31,449	0/0:29,0:29:75.24:0,75,1161	0/0:20,0:20:57.17:0,57,859	0/0:22,0:22:60.17:0,60,905	1/1:8,28:37:93.28:1907,93,0	1/1:8,17:25:45.15:982,45,0	0/0:31,0:31:81.25:0,81,1220	0/0:24,0:24:63.21:0,63,994	0/0:27,0:27:75.26:0,75,1178	0/0:18,0:18:48.13:0,48,714	0/0:28,0:28:81.26:0,81,1261	0/0:24,0:24:72.25:0,72,1142	0/0:29,0:29:81.26:0,81,1255	0/0:33,0:33:93.32:0,93,1469	0/0:21,0:21:60.20:0,60,933	0/0:20,0:20:57.19:0,57,903	0/0:28,0:28:75.26:0,75,1187	0/0:16,0:16:48.15:0,48,738	0/0:29,0:29:69.22:0,69,1072	0/0:30,0:30:84.29:0,84,1331	0/0:24,0:24:72.23:0,72,1113	0/0:19,0:19:57.19:0,57,897	0/0:32,0:32:87.28:0,87,1355	0/0:33,0:32:78.27:0,78,1234	0/0:13,0:13:36.12:0,36,571
chr10	89063887	.	TG	T	1748.10	PASS	AB=0.925;AC=30;AF=0.536;AN=56;BaseQRankSum=0.420;DP=432;FS=1.198;HRun=11;HaplotypeScore=64.7131;InbreedingCoeff=0.0631;MQ=71.29;MQ0=0;MQRankSum=-0.938;QD=4.91;ReadPosRankSum=4.209;VQSLOD=1.0737;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,11:26:31.03:233,31,0	0/0:1,0:1:0:0,0,0	0/1:17,1:17:16.80:17,0,134	0/1:16,0:13:7.14:7,0,84	0/1:14,4:18:15.63:16,0,48	1/1:8,12:21:40.27:324,40,0	1/1:10,5:17:28.03:208,28,0	0/0:12,0:12:8.42:0,8,62	1/1:7,12:19:41.91:340,42,0	0/0:5,0:5:2.90:0,3,16	1/1:7,0:7:1.81:5,2,0	0/1:21,1:22:28.23:28,0,132	0/1:18,0:18:2.80:3,0,165	0/1:19,3:22:55.80:56,0,76	0/0:12,0:12:18.04:0,18,185	0/0:16,1:17:5.40:0,5,247	1/1:22,0:22:7.68:54,8,0	0/1:14,1:15:28.20:28,0,133	1/1:10,4:14:16.78:128,17,0	1/1:9,0:9:8.98:73,9,0	0/0:14,0:14:5.97:0,6,45	0/0:15,0:15:24.05:0,24,247	0/1:14,1:15:15.34:15,0,55	0/1:17,1:18:6.62:7,0,133	0/1:8,2:10:37.25:37,0,52	0/1:21,1:22:33.46:33,0,108	1/1:9,10:19:35.93:295,36,0	0/1:7,1:8:12.61:13,0,84
chr10	89063897	.	GGT	G	459.02	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.670;DP=424;FS=6.447;HRun=0;HaplotypeScore=73.3000;InbreedingCoeff=0.8757;MQ=77.36;MQ0=0;MQRankSum=-5.622;QD=11.48;ReadPosRankSum=-0.998;VQSLOD=2.0656;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:41.17:0,41,370	1/1:2,0:2:2.96:19,3,0	0/0:20,0:19:30.69:0,31,443	0/0:18,0:15:30.77:0,31,384	0/0:13,0:13:29.82:0,30,295	0/0:22,0:22:47.40:0,47,325	0/0:19,0:19:37.37:0,37,311	0/0:10,0:10:17.93:0,18,193	0/0:24,0:24:51.60:0,52,389	1/1:10,1:11:28.56:192,29,0	1/1:5,1:6:10.83:58,11,0	0/0:16,0:16:32.55:0,33,382	0/0:16,0:16:42.02:0,42,523	0/0:21,0:21:53.02:0,53,529	0/0:12,0:12:33.06:0,33,425	0/0:16,0:16:38.98:0,39,499	1/1:19,2:21:46.35:336,46,0	0/0:14,0:14:41.18:0,41,485	0/0:12,1:13:3.86:0,4,201	0/0:13,0:13:27.67:0,28,222	0/0:9,0:9:24.01:0,24,263	0/0:16,0:16:42.05:0,42,506	0/0:11,0:11:16.39:0,16,184	0/0:14,0:14:29.89:0,30,353	0/0:13,0:13:30.22:0,30,301	0/0:19,0:19:11.23:0,11,494	0/0:21,0:21:54.24:0,54,374	0/0:5,0:5:14.92:0,15,169
chr10	89063918	.	CACT	C	2102.50	PASS	AB=0.931;AC=9;AF=0.161;AN=56;BaseQRankSum=9.268;DP=488;FS=18.974;HRun=0;HaplotypeScore=82.9154;InbreedingCoeff=0.8163;MQ=89.04;MQ0=0;MQRankSum=-9.461;QD=28.41;ReadPosRankSum=-0.344;VQSLOD=2.2785;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.25:0,72,1774	1/1:0,1:1:3.01:56,3,0	0/0:21,0:21:43.18:0,43,1109	0/0:29,0:28:77.10:0,77,1700	0/0:19,0:19:57.20:0,57,1403	0/0:23,0:23:69.24:0,69,1661	0/0:17,0:17:51.18:0,51,1257	0/0:14,0:14:39.13:0,39,938	0/0:30,0:30:87.30:0,87,2141	1/1:0,15:15:45.15:816,45,0	1/1:0,8:8:21.07:351,21,0	0/0:16,0:16:48.16:0,48,1156	0/0:17,0:17:51.15:0,51,1191	0/0:21,0:21:63.22:0,63,1546	0/0:14,0:14:42.14:0,42,1035	0/0:17,0:17:51.18:0,51,1254	1/1:0,23:23:54.19:1005,54,0	0/0:15,0:15:45.15:0,45,1056	0/0:19,0:19:57.20:0,57,1395	0/0:19,0:19:51.18:0,51,1255	0/0:13,0:13:39.13:0,39,952	0/0:15,0:15:45.15:0,45,1080	0/0:13,0:13:39.13:0,39,929	0/0:9,0:9:27.09:0,27,661	0/0:11,0:11:33.11:0,33,791	0/1:25,2:27:30.49:30,0,1644	0/0:26,0:26:75.26:0,75,1821	0/0:9,0:9:27.09:0,27,578
chr10	89064087	.	TG	T	1158.03	PASS	AB=0.647;AC=4;AF=0.071;AN=56;BaseQRankSum=11.550;DP=630;FS=52.384;HRun=3;HaplotypeScore=78.8443;InbreedingCoeff=-0.0190;MQ=83.72;MQ0=0;MQRankSum=-10.261;QD=12.59;ReadPosRankSum=-0.793;VQSLOD=-0.5132;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.20:0,63,888	0/1:2,10:12:8.82:276,0,9	0/0:22,0:22:60.18:0,60,818	0/0:24,0:24:50.17:0,50,739	0/0:17,0:17:51.17:0,51,734	0/0:35,0:35:99:0,102,1411	0/0:29,0:29:78.24:0,78,1086	0/0:33,0:33:93.26:0,93,1283	0/0:27,0:27:81.27:0,81,1166	0/1:14,11:25:99:292,0,165	0/1:13,16:29:99:368,0,168	0/0:25,0:25:75.20:0,75,1021	0/0:19,0:19:57.15:0,57,748	0/0:18,0:18:54.08:0,54,731	0/0:21,0:21:63.19:0,63,888	0/0:32,0:32:90.26:0,90,1240	0/1:15,11:25:48.08:332,0,48	0/0:12,0:12:27.05:0,27,365	0/0:14,0:14:42.09:0,42,549	0/0:30,0:30:90.28:0,90,1275	0/0:28,0:28:78.20:0,78,1048	0/0:24,0:24:72.21:0,72,1011	0/0:23,0:23:69.21:0,69,957	0/0:14,0:14:39.13:0,39,558	0/0:16,0:16:48.16:0,48,688	0/0:20,0:20:57.18:0,57,804	0/0:28,0:28:84.28:0,84,1209	0/0:6,0:6:18.06:0,18,259
chr10	89064324	.	A	ATTTTT	2248.37	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=1.396;DP=604;FS=6.175;HRun=10;HaplotypeScore=113.5694;InbreedingCoeff=0.9597;MQ=72.21;MQ0=0;MQRankSum=-1.991;QD=28.83;ReadPosRankSum=-4.596;VQSLOD=0.8810;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:81.12:0,81,1296	1/1:1,1:4:12.04:294,12,0	0/0:13,0:12:20.98:0,21,332	0/0:14,0:15:6.29:0,6,272	0/0:17,0:17:39.03:0,39,599	0/0:20,0:20:48.07:0,48,772	0/0:19,0:19:45.07:0,45,700	1/1:7,0:28:12.55:283,13,0	0/0:22,0:22:54.09:0,54,869	1/1:10,7:21:32.88:789,33,0	1/1:5,6:13:19.88:418,20,0	0/0:33,0:33:75.09:0,75,1204	0/0:27,0:27:72.17:0,72,1152	0/0:31,0:31:69.09:0,69,1110	0/0:37,0:38:96.20:0,96,1526	0/0:25,0:26:68.62:0,69,1066	1/1:2,7:12:24.08:636,24,0	0/0:27,0:27:72.21:0,72,1149	0/0:16,0:16:35.38:0,35,507	0/0:19,0:20:60.20:0,60,938	0/0:23,0:23:60.09:0,60,938	0/0:19,0:19:57.19:0,57,917	0/0:15,0:16:32.55:0,33,492	0/0:19,0:19:54.15:0,54,841	0/0:14,0:14:36.09:0,36,579	0/0:32,0:32:81.14:0,81,1303	0/0:34,0:35:99:0,102,1602	0/0:7,0:7:21.07:0,21,338
chr10	89065841	.	GCT	G	1380.41	PASS	AB=0.890;AC=29;AF=0.537;AN=54;BaseQRankSum=1.626;DP=596;FS=4.882;HRun=0;HaplotypeScore=109.0119;InbreedingCoeff=0.2817;MQ=66.49;MQ0=13;MQRankSum=-2.826;QD=3.44;ReadPosRankSum=0.106;VQSLOD=1.6038;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,1:22:0.04:0,0,0	1/1:5,0:11:11.36:56,11,0	./.	0/0:23,0:9:0.47:0,0,1	0/1:22,0:22:15.36:15,0,40	0/1:16,0:16:13.25:13,0,21	0/0:20,0:19:5.46:0,5,92	1/1:27,0:27:2.13:23,2,0	0/1:18,1:19:2.87:15,0,3	1/1:14,0:17:14.24:71,14,0	1/1:8,0:12:8.52:42,9,0	0/0:16,0:16:26.34:0,26,198	0/1:10,11:21:33.11:86,0,33	0/0:24,0:24:13.78:0,14,254	1/1:22,10:32:15.34:146,15,0	1/1:8,15:24:20.77:211,21,0	1/1:15,0:19:11.36:56,11,0	0/1:15,0:13:27.46:27,0,82	0/0:24,0:24:9.02:0,9,90	0/0:24,0:28:12.64:0,13,205	1/1:24,0:24:26.87:209,27,0	0/1:17,0:17:39.97:50,0,40	1/1:13,0:14:17.76:147,18,0	0/1:29,14:43:99:146,0,289	0/0:21,0:22:10.89:0,11,168	1/1:18,0:18:7.78:219,8,0	0/0:12,0:12:30.02:0,30,309	0/1:12,4:16:18.94:27,0,19
chr10	89065883	.	TCACA	T	3079.86	PASS	AB=0.977;AC=15;AF=0.268;AN=56;BaseQRankSum=-3.330;DP=680;FS=2.163;HRun=0;HaplotypeScore=160.6013;InbreedingCoeff=0.6225;MQ=50.89;MQ0=17;MQRankSum=5.203;QD=14.19;ReadPosRankSum=-0.470;VQSLOD=3.2763;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:33:29.62:0,30,281	0/0:15,0:15:24.08:0,24,239	0/0:4,0:2:3.01:0,3,54	0/0:12,0:3:5.88:0,6,54	1/1:26,0:26:46.69:658,47,0	1/1:3,9:12:3:50,3,0	1/1:19,0:19:30.06:420,30,0	0/0:24,0:22:45.07:0,45,747	0/0:19,0:15:14.69:0,15,136	0/0:26,0:23:58.96:0,59,846	0/0:16,0:16:20.33:0,20,264	1/1:27,1:28:11.16:653,11,0	0/0:26,0:26:50.18:0,50,738	0/1:30,1:29:99:614,0,114	0/0:27,0:27:50.17:0,50,731	0/0:31,0:31:58.44:0,58,871	0/0:18,0:17:30.71:0,31,330	1/1:15,1:15:1.73:198,2,0	0/0:19,0:18:37.27:0,37,602	0/0:36,0:36:62.16:0,62,1091	0/1:28,0:26:2.22:2,0,507	1/1:27,0:28:17.62:628,18,0	0/0:24,0:24:39.55:0,40,623	0/0:40,0:40:43.31:0,43,1253	0/1:25,0:25:30.54:31,0,182	0/0:28,0:28:61.25:0,61,859	0/0:26,0:28:72.25:0,72,1327	0/0:24,0:24:56.89:0,57,929
chr10	89065937	.	A	AATTAATAAAGT	9616.38	PASS	AB=0.813;AC=10;AF=0.179;AN=56;BaseQRankSum=10.051;DP=734;FS=19.256;HRun=0;HaplotypeScore=271.8749;InbreedingCoeff=0.7548;MQ=75.50;MQ0=0;MQRankSum=-12.534;QD=65.87;ReadPosRankSum=-2.935;VQSLOD=3.0792;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:37,8:41:99:1659,0,871	1/1:11,5:16:27.09:1197,27,0	0/0:27,0:29:51.16:0,51,1288	0/0:16,0:17:32.82:0,33,707	0/0:35,0:35:93.32:0,93,3017	0/0:18,0:18:36.12:0,36,1198	0/0:26,0:26:69.19:0,69,2168	0/0:39,0:39:84.28:0,84,2457	0/1:15,6:20:99:1152,0,744	1/1:21,14:36:72.24:3403,72,0	1/1:7,7:14:27.09:1395,27,0	0/0:29,0:29:81.26:0,81,2462	0/0:27,0:27:69.05:0,69,1938	0/0:28,0:28:72.23:0,72,2292	0/0:30,0:30:78.25:0,78,2416	0/0:31,0:31:90.30:0,90,2811	1/1:12,2:14:21.03:812,21,0	0/0:16,0:16:42.14:0,42,1348	0/0:28,0:28:54.13:0,54,1449	0/0:35,0:35:81.28:0,81,2662	0/0:24,0:24:57.20:0,57,1871	0/0:27,0:27:72.22:0,72,2143	0/0:20,0:20:51.17:0,51,1542	0/0:27,0:27:63.22:0,63,2017	0/0:22,0:22:57.15:0,57,1715	0/0:29,0:29:72.25:0,72,2296	0/0:31,0:31:68.99:0,69,2085	0/0:20,0:20:39.13:0,39,1203
chr10	89065967	.	TATGC	T	5234.84	PASS	AB=0.676;AC=10;AF=0.179;AN=56;BaseQRankSum=13.067;DP=769;FS=13.252;HRun=0;HaplotypeScore=167.8010;InbreedingCoeff=0.7559;MQ=75.62;MQ0=0;MQRankSum=-13.918;QD=36.61;ReadPosRankSum=1.194;VQSLOD=4.5346;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,15:38:99:852,0,872	1/1:2,10:12:27.09:512,27,0	0/0:25,0:25:69.24:0,69,1751	0/0:15,0:15:38.96:0,39,893	0/0:38,0:38:99:0,114,3008	0/0:18,0:18:48.16:0,48,1296	0/0:33,0:33:87.30:0,87,2317	0/0:37,0:37:99:0,105,2685	0/1:14,19:33:99:926,0,801	1/1:2,25:27:75.26:1423,75,0	1/1:1,18:19:51.17:953,51,0	0/0:36,0:36:99:0,108,2823	0/0:30,0:30:87.30:0,87,2306	0/0:29,0:29:81.28:0,81,2144	0/0:36,0:36:99:0,108,2837	0/0:36,0:36:99:0,105,2773	1/1:1,13:14:30.10:569,30,0	0/0:20,0:20:54.19:0,54,1401	0/0:27,0:27:75.26:0,75,1919	0/0:34,0:34:96.33:0,96,2591	0/0:29,0:29:75.26:0,75,1999	0/0:32,0:32:93.32:0,93,2490	0/0:20,0:20:57.20:0,57,1503	0/0:33,0:33:93.32:0,93,2421	0/0:23,0:23:63.22:0,63,1679	0/0:29,1:30:27.37:0,27,2114	0/0:27,0:27:69.22:0,69,1770	0/0:18,0:18:48.16:0,48,1291
chr10	89066186	.	GAA	G	983.09	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.195;DP=801;FS=5.877;HRun=6;HaplotypeScore=94.1860;InbreedingCoeff=0.9997;MQ=69.10;MQ0=1;MQRankSum=2.425;QD=31.71;ReadPosRankSum=-4.270;VQSLOD=2.6209;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:65:99:0,184,3194	0/0:11,0:11:33.11:0,33,593	0/0:19,0:19:48.06:0,48,772	0/0:26,0:25:51.45:0,51,975	0/0:36,0:36:99:0,102,1808	0/0:36,0:36:99:0,102,1776	0/0:17,0:17:45.14:0,45,758	1/1:3,28:31:84.22:1078,84,0	0/0:59,0:59:99:0,171,2981	0/0:32,0:31:90.27:0,90,1561	0/0:21,0:21:57.14:0,57,965	0/0:29,0:29:81.27:0,81,1425	0/0:23,0:23:63.21:0,63,1106	0/0:27,0:27:72.25:0,72,1296	0/0:28,0:28:84.28:0,84,1482	0/0:25,0:25:72.24:0,72,1270	0/0:35,0:35:87.24:0,87,1449	0/0:22,0:22:66.21:0,66,1154	0/0:26,0:26:69.22:0,69,1164	0/0:32,0:32:90.29:0,90,1537	0/0:22,0:22:63.21:0,63,1108	0/0:23,0:23:66.21:0,66,1133	0/0:25,0:25:66.21:0,66,1158	0/0:31,0:31:87.30:0,87,1537	0/0:18,0:18:54.19:0,54,968	0/0:24,0:24:66.23:0,66,1189	0/0:36,0:36:99:0,105,1848	0/0:22,0:22:63.20:0,63,1079
chr10	89066890	.	C	CTTGGTTGG	7267.54	PASS	AB=0.692;AC=35;AF=0.673;AN=52;BaseQRankSum=7.619;DP=842;FS=5.048;HRun=0;HaplotypeScore=228.8650;InbreedingCoeff=0.8518;MQ=58.93;MQ0=6;MQRankSum=-8.392;QD=13.33;ReadPosRankSum=-4.107;VQSLOD=2.5121;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:85,0:83:26.68:410,27,0	1/1:15,0:15:23.99:272,24,0	./.	./.	1/1:14,7:23:14.96:260,15,0	1/1:28,0:27:12.01:206,12,0	1/1:30,0:30:23.89:357,24,0	1/1:26,0:24:9.03:111,9,0	1/1:49,0:48:29.96:470,30,0	1/1:35,0:34:32.81:316,33,0	1/1:21,0:21:18.53:273,19,0	1/1:24,0:24:42.12:872,42,0	0/0:31,0:31:39.21:0,39,847	1/1:30,0:30:48.09:1300,48,0	0/0:28,0:28:36.11:0,36,755	0/0:31,0:31:41.94:0,42,829	1/1:31,0:31:35.84:396,36,0	0/1:15,11:27:52.74:115,0,53	1/1:31,0:29:24.04:381,24,0	1/1:25,0:25:20.95:289,21,0	0/0:48,0:47:54.16:0,54,1218	1/1:19,0:19:3.01:109,3,0	0/0:18,0:18:15.80:0,16,369	0/0:52,0:52:75.08:0,75,1542	1/1:26,0:26:42.12:880,42,0	0/0:47,0:47:43.85:0,44,923	1/1:20,0:20:20.93:249,21,0	0/0:4,0:4:9.03:0,9,199
chr10	89066918	.	G	GTTGGTTGG	5541.97	PASS	AB=1.000;AC=34;AF=0.654;AN=52;BaseQRankSum=5.615;DP=826;FS=6.093;HRun=0;HaplotypeScore=216.5508;InbreedingCoeff=0.8394;MQ=48.74;MQ0=25;MQRankSum=-7.408;QD=10.70;ReadPosRankSum=-4.370;VQSLOD=2.0088;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:61,0:59:32.82:387,33,0	1/1:12,0:12:17.97:173,18,0	0/1:18,0:5:0:0,0,0	./.	1/1:23,0:23:14.97:260,15,0	1/1:12,15:26:11.59:171,12,0	1/1:34,0:33:17.87:217,18,0	1/1:30,0:24:8.97:69,9,0	1/1:44,0:43:34.27:454,34,0	1/1:32,0:30:29.53:266,30,0	1/1:14,0:13:9.50:110,9,0	1/1:34,0:34:38.84:744,39,0	0/0:27,0:27:39.23:0,39,847	1/1:29,0:29:40.88:1054,41,0	0/0:32,0:32:36.11:0,36,755	0/0:27,0:26:41.94:0,42,829	1/1:31,0:29:31.49:310,31,0	0/1:35,0:35:56.74:130,0,57	1/1:27,0:17:17.36:276,17,0	1/1:21,0:20:11.92:109,12,0	0/0:61,0:59:54.15:0,54,1218	./.	0/0:23,0:21:15.88:0,16,369	0/0:49,0:49:74.35:0,74,1569	1/1:28,0:27:32.65:630,33,0	0/0:32,0:32:43.83:0,44,890	1/1:16,0:16:19.74:182,20,0	0/0:6,0:6:9.03:0,9,199
chr10	89066929	.	GGTTGGTTA	G	845.14	PASS	AB=0.965;AC=10;AF=0.179;AN=56;BaseQRankSum=12.242;DP=825;FS=2.641;HRun=0;HaplotypeScore=216.7237;InbreedingCoeff=-0.2228;MQ=47.18;MQ0=29;MQRankSum=-8.852;QD=2.96;ReadPosRankSum=1.989;VQSLOD=2.7849;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:46,3:46:99:403,0,101	0/1:12,0:12:28.08:28,0,118	0/0:25,0:5:11.99:0,12,108	0/0:41,0:7:17.91:0,18,151	0/0:22,0:22:7.75:0,8,295	0/0:29,0:27:14.99:0,15,422	0/0:31,0:30:52.87:0,53,768	0/0:35,0:28:63.02:0,63,651	0/1:25,18:42:99:288,0,205	0/1:29,0:26:50.56:51,0,94	0/1:15,0:14:25.50:26,0,240	0/1:33,0:33:32.84:33,0,416	0/0:32,0:32:89.07:0,89,1922	0/1:28,0:28:77.92:78,0,561	0/0:28,0:28:68.16:0,68,1896	0/0:25,0:24:65.73:0,66,1890	0/1:32,0:29:36.73:37,0,155	0/0:34,0:34:30.80:0,31,446	0/0:30,0:21:13.68:0,14,544	0/0:19,0:18:34.90:0,35,467	0/0:66,0:64:99:0,165,3321	0/0:18,0:18:29.37:0,29,424	0/0:23,0:21:56.86:0,57,958	0/0:47,0:47:99:0,122,3176	0/1:27,0:26:37.44:37,0,710	0/0:29,0:29:68.11:0,68,1919	0/1:18,0:18:8.88:9,0,111	0/0:5,0:5:15.01:0,15,350
chr10	89066936	.	TAGTTAGTTGGTG	T	4078.44	PASS	AB=0.977;AC=17;AF=0.304;AN=56;BaseQRankSum=8.251;DP=807;FS=1.976;HRun=0;HaplotypeScore=254.0737;InbreedingCoeff=-0.4219;MQ=47.16;MQ0=24;MQRankSum=-6.695;QD=8.83;ReadPosRankSum=-4.795;VQSLOD=1.8550;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:40:99:349,0,254	0/1:11,0:11:45.35:179,0,45	0/0:35,0:7:21.07:0,21,444	0/0:42,0:8:24.08:0,24,492	0/1:24,0:23:99:127,0,700	0/0:26,0:24:4.86:0,5,606	0/1:32,0:32:99:152,0,1408	0/1:32,0:26:5.48:5,0,1411	0/1:40,0:39:70.38:366,0,70	0/1:27,0:23:48.07:362,0,48	0/1:15,0:15:99:137,0,196	0/1:29,0:29:99:507,0,986	0/0:33,0:33:54.70:0,55,2205	0/1:26,0:27:99:488,0,960	0/0:31,0:31:93.17:0,93,2626	0/0:24,0:23:55.40:0,55,1960	0/1:26,0:23:8.57:342,0,9	0/1:30,0:30:35.60:36,0,959	0/1:30,0:25:99:183,0,1017	0/1:10,9:19:69.40:69,0,529	0/0:64,0:63:99:0,180,4803	0/0:9,6:15:24.08:0,24,596	0/0:23,0:21:44.32:0,44,1122	0/0:47,0:47:99:0,101,3306	0/1:29,0:28:99:535,0,1150	0/1:29,0:29:14.97:15,0,1748	0/1:18,0:18:72.27:225,0,72	0/0:5,0:5:13.29:0,13,292
chr10	89066948	.	G	GGGTT	1416.06	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=6.510;DP=760;FS=10.392;HRun=0;HaplotypeScore=156.3471;InbreedingCoeff=0.4981;MQ=46.74;MQ0=23;MQRankSum=-4.362;QD=4.37;ReadPosRankSum=-2.281;VQSLOD=1.2096;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:31:14.58:36,0,15	1/1:9,0:9:4.19:21,4,0	0/1:39,0:7:0.84:1,0,19	0/0:46,0:11:4.97:0,5,56	0/0:20,0:19:21.12:0,21,242	0/1:23,0:19:3.30:3,0,132	0/0:33,0:31:51.05:0,51,635	0/0:24,0:23:17.73:0,18,139	0/1:34,0:38:36.18:36,0,96	1/1:25,0:20:30.04:458,30,0	1/1:19,0:18:16.45:146,16,0	0/0:22,0:22:38.73:0,39,490	0/0:30,0:30:50.96:0,51,687	0/0:25,0:25:39.07:0,39,531	0/0:33,0:33:65.93:0,66,774	0/0:22,0:21:34.64:0,35,391	1/1:21,0:18:21.05:286,21,0	0/1:29,0:29:13.33:13,0,580	1/1:26,0:24:21.03:346,21,0	1/1:20,0:20:15.75:174,16,0	0/0:74,0:71:99:0,138,1772	0/0:17,0:17:10.79:0,11,87	0/0:19,0:18:29.71:0,30,308	0/0:42,0:42:68.27:0,68,860	0/1:25,0:24:12.08:12,0,319	0/0:24,0:24:35.39:0,35,442	1/1:4,9:14:3.01:69,3,0	0/0:5,0:5:6.02:0,6,95
chr10	89067079	.	CTGGTTGGT	C	709.66	PASS	AB=0.808;AC=6;AF=0.107;AN=56;BaseQRankSum=7.315;DP=640;FS=8.435;HRun=0;HaplotypeScore=137.6604;InbreedingCoeff=0.2242;MQ=45.80;MQ0=43;MQRankSum=-2.141;QD=7.97;ReadPosRankSum=-0.132;VQSLOD=1.4266;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:23:24.86:25,0,128	0/1:4,7:11:70.38:70,0,123	0/0:18,0:4:8.82:0,9,142	0/0:23,0:4:12.04:0,12,306	0/0:10,0:8:15.92:0,16,379	0/0:25,0:22:51.12:0,51,1554	0/0:40,0:31:84.27:0,84,2520	0/0:27,0:19:54:0,54,933	0/0:7,0:9:17.86:0,18,151	1/1:5,17:19:23.87:404,24,0	0/1:8,9:16:99:151,0,127	0/0:29,0:28:69.21:0,69,1945	0/0:30,0:26:60.06:0,60,1523	0/0:22,0:20:52.05:0,52,1522	0/0:18,0:17:42.12:0,42,1193	0/0:29,0:26:66.19:0,66,1950	0/1:11,0:11:79.90:189,0,80	0/0:40,0:40:43.40:0,43,2548	0/0:26,0:7:21.03:0,21,527	0/0:16,0:12:30.08:0,30,680	0/0:70,2:60:63.34:0,63,4217	0/0:11,0:9:21:0,21,630	0/0:10,0:9:21:0,21,486	0/0:43,0:41:88.37:0,88,3012	0/0:15,0:12:17.98:0,18,433	0/0:19,0:19:54.15:0,54,1539	0/0:9,0:8:20.99:0,21,440	0/0:8,0:6:8.77:0,9,267
chr10	89067209	.	A	AGTTG	1692.29	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=4.147;DP=758;FS=1.241;HRun=0;HaplotypeScore=124.7676;InbreedingCoeff=0.4326;MQ=50.23;MQ0=25;MQRankSum=-3.911;QD=12.00;ReadPosRankSum=0.924;VQSLOD=3.0403;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,4:33:57.05:965,57,0	0/1:10,0:10:4.68:64,0,5	0/0:28,0:2:3.01:0,3,34	0/0:36,0:7:11.98:0,12,102	0/0:15,0:14:29.66:0,30,425	0/0:19,0:19:56.55:0,57,796	0/0:35,0:35:99:0,99,1419	0/0:35,0:30:57.08:0,57,867	1/1:13,17:28:21.17:529,21,0	0/1:30,0:27:73.30:238,0,73	0/1:14,0:12:25.14:33,0,25	0/0:35,0:35:87.18:0,87,1287	0/0:30,0:29:57.14:0,57,880	0/0:25,0:25:63.18:0,63,1008	0/0:26,0:25:60.14:0,60,952	0/0:41,0:41:99:0,111,1660	0/1:21,0:18:9.18:9,0,39	0/0:30,0:30:78.17:0,78,1222	0/0:28,0:25:57.17:0,57,863	0/0:19,0:18:35.72:0,36,450	0/0:68,0:68:99:0,184,2818	0/0:13,0:13:29.85:0,30,419	0/0:18,0:17:33.03:0,33,468	0/0:50,0:49:87.68:0,88,1830	0/0:19,0:18:36.04:0,36,549	0/0:21,0:20:56.35:0,56,846	0/0:22,0:21:47.56:0,48,525	0/0:4,0:4:9.02:0,9,108
chr10	89067347	.	T	TTGGC	2369.21	PASS	AB=0.940;AC=13;AF=0.232;AN=56;BaseQRankSum=1.472;DP=623;FS=1.078;HRun=0;HaplotypeScore=113.0517;InbreedingCoeff=0.6300;MQ=51.98;MQ0=21;MQRankSum=-0.129;QD=15.09;ReadPosRankSum=-1.490;VQSLOD=2.9259;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,5:23:4.97:571,0,5	0/0:3,0:3:5.98:0,6,48	0/0:16,0:4:8.82:0,9,90	0/0:20,0:6:1.98:0,2,32	0/0:20,0:20:51.06:0,51,749	0/0:23,0:23:63.20:0,63,1129	0/0:31,0:31:87.17:0,87,1251	1/1:17,0:10:10.98:179,11,0	1/1:16,4:20:24.62:675,25,0	0/1:28,0:25:20.09:20,0,297	0/0:5,0:3:5.90:0,6,42	0/0:27,0:27:78.17:0,78,1221	0/0:25,0:24:65.84:0,66,1135	0/0:20,0:20:57.12:0,57,964	0/0:25,0:25:72.16:0,72,1156	0/0:32,0:32:84.20:0,84,1377	0/1:19,0:19:92.59:93,0,190	0/0:28,0:28:81.04:0,81,1147	1/1:8,9:9:23.10:392,23,0	1/1:1,12:16:23.28:373,23,0	0/0:50,0:50:99:0,132,1966	0/0:26,0:26:72.13:0,72,1139	0/0:24,0:22:59.86:0,60,832	0/0:37,1:37:51.38:0,51,1503	0/0:21,0:21:57.07:0,57,806	0/0:23,0:22:43.23:0,43,877	1/1:1,14:17:8.83:243,9,0	0/0:9,0:8:18.06:0,18,341
chr10	89068679	.	G	GT	1003.21	PASS	AB=0.733;AC=2;AF=0.036;AN=56;BaseQRankSum=10.745;DP=785;FS=1.240;HRun=5;HaplotypeScore=100.6078;InbreedingCoeff=-0.0409;MQ=81.29;MQ0=0;MQRankSum=-8.365;QD=8.72;ReadPosRankSum=-2.169;VQSLOD=0.1955;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:44,29:73:99:643,0,1039	0/0:13,0:13:33.08:0,33,355	0/0:33,0:32:7.89:0,8,540	0/0:30,0:29:42.73:0,43,657	0/0:19,0:19:50.95:0,51,507	0/0:25,0:25:66.11:0,66,696	0/0:36,0:36:96.12:0,96,983	0/0:29,0:29:81.14:0,81,821	0/1:28,14:42:99:449,0,541	0/0:32,0:32:81.18:0,81,860	0/0:16,0:16:48.05:0,48,487	0/0:31,0:31:87.22:0,87,935	0/0:27,0:27:81.20:0,81,867	0/0:25,0:25:72:0,72,731	0/0:28,0:28:81.17:0,81,854	0/0:24,0:24:69.17:0,69,741	0/0:37,0:37:99:0,105,1119	0/0:23,0:23:63.13:0,63,666	0/0:29,0:29:75.14:0,75,773	0/0:37,0:37:99:0,99,1031	0/0:22,0:22:60.12:0,60,629	0/0:19,0:19:48.12:0,48,515	0/0:15,0:15:45.08:0,45,467	0/0:43,0:43:99:0,114,1178	0/0:20,0:20:54.06:0,54,544	0/0:31,0:31:90.20:0,90,947	0/0:22,0:22:65.97:0,66,672	0/0:4,0:4:12.01:0,12,117
chr10	89069154	.	AAGGCCAT	A	2738.81	PASS	AB=0.733;AC=2;AF=0.036;AN=56;BaseQRankSum=10.560;DP=792;FS=11.123;HRun=0;HaplotypeScore=192.0083;InbreedingCoeff=-0.0375;MQ=88.69;MQ0=0;MQRankSum=-10.692;QD=20.29;ReadPosRankSum=-0.087;VQSLOD=1.8173;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:55,34:89:99:1779,0,5370	0/0:6,0:6:18.06:0,18,727	0/0:33,0:33:93.22:0,93,3293	0/0:26,0:26:72.18:0,72,2447	0/0:23,0:23:69.24:0,69,2602	0/0:14,0:14:42.14:0,42,1667	0/0:30,0:30:84.29:0,84,3331	0/0:25,0:25:69.23:0,69,2617	0/1:30,16:46:99:1049,0,3090	0/0:27,0:27:81.28:0,81,3250	0/0:16,0:16:44.97:0,45,1788	0/0:30,0:30:87.30:0,87,3488	0/0:24,0:24:72.25:0,72,2764	0/0:42,0:42:99:0,126,4928	0/0:33,0:33:96.30:0,96,3687	0/0:26,0:26:75.26:0,75,3007	0/0:36,0:36:99:0,108,4160	0/0:36,0:36:99:0,108,4263	0/0:19,0:19:51.18:0,51,1960	0/0:22,0:22:66.23:0,66,2585	0/0:50,0:50:99:0,151,5861	0/0:14,0:14:42.14:0,42,1677	0/0:21,0:21:63.22:0,63,2544	0/0:28,0:28:81.19:0,81,2974	0/0:19,0:19:57.20:0,57,2219	0/0:16,0:16:48.16:0,48,1890	0/0:34,0:34:99:0,102,3895	0/0:7,0:7:21.07:0,21,832
chr10	89069519	.	GAT	G	753.40	PASS	AB=0.927;AC=8;AF=0.143;AN=56;BaseQRankSum=6.034;DP=594;FS=3.742;HRun=0;HaplotypeScore=91.6417;InbreedingCoeff=0.4359;MQ=69.55;MQ0=19;MQRankSum=-1.779;QD=6.61;ReadPosRankSum=0.619;VQSLOD=3.2064;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:26,4:30:72.02:72,0,209	1/1:9,2:10:18.84:144,19,0	0/0:24,0:15:21.45:0,21,294	0/0:36,0:24:8.11:0,8,373	0/0:17,0:17:34.96:0,35,269	0/0:25,0:25:65.86:0,66,574	0/0:32,0:32:69.54:0,70,585	0/0:29,0:28:78.14:0,78,627	0/1:23,4:27:99:103,0,145	0/1:15,0:15:6.21:241,0,6	1/1:9,0:8:17.95:143,18,0	0/0:25,0:25:58.97:0,59,487	0/0:18,0:18:50.34:0,50,481	0/0:20,0:20:39.41:0,39,284	0/0:23,0:23:56.98:0,57,487	0/0:24,0:22:43.29:0,43,408	0/1:21,1:22:39.54:198,0,40	0/0:19,0:19:51.55:0,52,442	0/0:28,0:24:70.78:0,71,553	0/0:19,0:19:47.94:0,48,397	0/0:23,0:20:56.75:0,57,478	0/0:13,0:13:34.42:0,34,253	0/0:12,0:12:30.43:0,30,248	0/0:33,0:32:74.42:0,74,720	0/0:20,0:19:50.60:0,51,420	0/0:12,0:12:32.94:0,33,313	0/0:12,0:12:16.83:0,17,189	0/0:16,0:13:35.56:0,36,256
chr10	89069522	.	A	ATCTC	1305.58	PASS	AB=0.967;AC=29;AF=0.604;AN=48;BaseQRankSum=-1.862;DP=671;FS=4.811;HRun=0;HaplotypeScore=147.5648;InbreedingCoeff=-0.1396;MQ=66.32;MQ0=26;MQRankSum=1.219;QD=2.76;ReadPosRankSum=-1.298;VQSLOD=2.4247;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:12,0:11:3.44:21,3,0	./.	0/0:36,0:24:0:0,0,0	1/1:24,0:24:11.99:136,12,0	0/1:27,6:33:60.79:61,0,82	1/1:37,0:37:8.99:75,9,0	./.	0/1:25,0:27:5.10:5,0,22	0/1:20,0:20:23.82:71,0,24	./.	1/1:29,0:29:2.46:23,2,0	0/1:21,0:20:39.76:64,0,40	0/1:23,0:22:12.03:202,0,12	0/1:23,0:23:26.01:63,0,26	0/0:21,0:24:2.56:0,3,145	0/1:21,0:21:5.84:6,0,65	1/1:24,0:24:13.06:132,13,0	0/1:31,0:27:17.95:39,0,18	0/0:21,0:20:2.49:0,2,9	0/1:28,0:25:27.90:28,0,77	1/1:15,0:15:9.01:137,9,0	1/1:13,0:13:2.99:24,3,0	0/1:36,0:34:46.81:47,0,89	0/0:21,0:20:8.98:0,9,93	1/1:10,0:17:17.29:115,17,0	0/1:16,3:21:16.60:133,0,17	1/1:16,0:13:8.94:67,9,0
chr10	89070280	.	TC	T	834.39	PASS	AB=0.745;AC=2;AF=0.036;AN=56;BaseQRankSum=10.116;DP=756;FS=9.318;HRun=3;HaplotypeScore=116.6579;InbreedingCoeff=-0.0371;MQ=86.78;MQ0=0;MQRankSum=-9.577;QD=7.45;ReadPosRankSum=1.606;VQSLOD=0.2122;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:48,24:72:99:571,0,1741	0/0:13,0:13:39.13:0,39,561	0/0:30,0:30:76.51:0,77,1022	0/0:33,0:32:87.25:0,87,1163	0/0:25,0:25:75.25:0,75,1073	0/0:33,0:33:96.31:0,96,1360	0/0:27,0:27:81.27:0,81,1164	0/0:43,0:43:99:0,123,1734	0/1:26,14:40:99:352,0,986	0/0:14,0:14:42.14:0,42,605	0/0:19,0:19:57.18:0,57,796	0/0:25,0:25:75.23:0,75,1045	0/0:20,0:20:54.18:0,54,775	0/0:25,0:25:75.25:0,75,1079	0/0:27,0:27:78.24:0,78,1087	0/0:27,0:27:78.26:0,78,1123	0/0:33,0:33:96.31:0,96,1364	0/0:9,0:9:27.09:0,27,384	0/0:21,0:21:57.14:0,57,747	0/0:22,0:22:66.22:0,66,945	0/0:33,0:33:99:0,99,1406	0/0:21,0:21:63.21:0,63,898	0/0:25,0:25:72.24:0,72,1033	0/0:37,0:37:99:0,105,1502	0/0:27,0:27:81.25:0,81,1134	0/0:21,0:21:60.20:0,60,863	0/0:24,0:24:69.22:0,69,974	0/0:10,0:10:30.10:0,30,428
chr10	89070291	.	A	AACCCAC	3621.21	PASS	AB=0.743;AC=2;AF=0.036;AN=56;BaseQRankSum=10.541;DP=805;FS=5.919;HRun=0;HaplotypeScore=197.5578;InbreedingCoeff=-0.0372;MQ=83.37;MQ0=0;MQRankSum=-10.086;QD=27.43;ReadPosRankSum=1.275;VQSLOD=2.9458;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:57,22:85:99:2034,0,3211	0/0:12,0:12:36.12:0,36,886	0/0:31,0:31:80.75:0,81,1617	0/0:28,0:27:31.14:0,31,1468	0/0:33,0:33:93.31:0,93,2122	0/0:33,0:33:96.31:0,96,2234	0/0:25,0:25:75.26:0,75,1809	0/0:37,0:37:99:0,105,2442	0/1:30,16:47:99:1587,0,1553	0/0:22,0:22:63.21:0,63,1448	0/0:17,0:17:51.17:0,51,1202	0/0:26,0:26:78.27:0,78,1865	0/0:18,0:18:48.16:0,48,1180	0/0:29,0:29:84.29:0,84,2004	0/0:32,0:32:93.30:0,93,2123	0/0:29,0:29:84.29:0,84,2033	0/0:35,0:35:99:0,105,2504	0/0:10,0:10:30.10:0,30,706	0/0:19,0:19:54.15:0,54,1113	0/0:27,0:27:81.24:0,81,1782	0/0:31,0:31:93.32:0,93,2244	0/0:22,0:22:63.22:0,63,1493	0/0:29,0:29:81.24:0,81,1818	0/0:40,0:40:99:0,111,2619	0/0:25,0:25:72.23:0,72,1679	0/0:29,0:29:84.27:0,84,1871	0/0:26,0:26:78.27:0,78,1908	0/0:8,0:8:24.08:0,24,566
chr10	89070492	.	A	AG	2440.62	PASS	AB=0.665;AC=2;AF=0.036;AN=56;BaseQRankSum=12.492;DP=843;FS=9.985;HRun=2;HaplotypeScore=88.6997;InbreedingCoeff=-0.0371;MQ=88.95;MQ0=0;MQRankSum=-3.164;QD=16.95;ReadPosRankSum=3.426;VQSLOD=2.9320;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:46,49:95:99:1754,0,1329	0/0:11,0:11:33.10:0,33,409	0/0:33,0:33:90.28:0,90,1111	0/0:31,0:31:84.23:0,84,1003	0/0:31,0:31:87.27:0,87,1071	0/0:20,0:20:60.19:0,60,744	0/0:31,0:31:87.27:0,87,1078	0/0:37,0:37:99:0,102,1253	0/1:25,24:49:99:775,0,689	0/0:34,0:34:99:0,99,1225	0/0:30,0:30:90.25:0,90,1099	0/0:23,0:23:63.20:0,63,779	0/0:16,0:16:48.15:0,48,594	0/0:27,0:27:78.24:0,78,966	0/0:35,0:35:99:0,102,1250	0/0:36,0:36:99:0,105,1289	0/0:34,0:34:96.26:0,96,1161	0/0:24,0:24:69.22:0,69,852	0/0:24,0:24:72.23:0,72,892	0/0:22,0:22:63.20:0,63,779	0/0:36,0:36:93.29:0,93,1152	0/0:25,0:25:72.23:0,72,892	0/0:24,0:24:72.21:0,72,879	0/0:32,0:32:93.28:0,93,1139	0/0:25,0:25:72.23:0,72,893	0/0:21,0:21:60.19:0,60,742	0/0:26,0:25:78.25:0,78,965	0/0:11,0:11:33.10:0,33,409
chr10	89070759	.	A	AG	321.04	PASS	AB=0.666;AC=2;AF=0.036;AN=56;BaseQRankSum=11.624;DP=793;FS=1.072;HRun=0;HaplotypeScore=160.8208;InbreedingCoeff=-0.0371;MQ=84.12;MQ0=0;MQRankSum=-11.675;QD=2.49;ReadPosRankSum=2.429;VQSLOD=2.5400;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:36,39:75:99:221,0,916	0/0:16,0:16:48.16:0,48,670	0/0:27,0:27:78.22:0,78,1054	0/0:26,0:26:75.21:0,75,925	0/0:27,0:27:81.23:0,81,1096	0/0:22,0:22:66.18:0,66,871	0/0:31,0:31:93.26:0,93,1262	0/0:30,0:29:84.24:0,84,1126	0/1:28,26:54:99:189,0,785	0/0:32,0:32:96.30:0,96,1309	0/0:11,0:11:33.11:0,33,458	0/0:30,0:30:87.25:0,87,1177	0/0:27,0:27:81.27:0,81,1131	0/0:40,0:40:99:0,120,1663	0/0:31,0:31:93.31:0,93,1300	0/0:30,0:30:90.29:0,90,1241	0/0:26,0:26:72.22:0,72,989	0/0:17,0:17:51.15:0,51,695	0/0:19,0:19:57.17:0,57,767	0/0:19,0:19:54.18:0,54,755	0/0:31,0:31:90.30:0,90,1258	0/0:20,0:20:57.19:0,57,797	0/0:22,0:21:60.20:0,60,839	0/0:28,0:28:84.18:0,84,1113	0/0:25,0:25:72.24:0,72,1003	0/0:33,0:33:99:0,99,1385	0/0:34,0:34:99:0,102,1426	0/0:10,0:10:30.08:0,30,401
chr10	89070772	.	A	AAACAC	7191.97	PASS	AB=0.969;AC=5;AF=0.089;AN=56;BaseQRankSum=15.581;DP=789;FS=1.764;HRun=0;HaplotypeScore=207.6963;InbreedingCoeff=0.7903;MQ=87.81;MQ0=0;MQRankSum=-15.300;QD=41.33;ReadPosRankSum=0.338;VQSLOD=4.9714;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,28:85:99:3803,160,0	0/0:17,0:17:51.17:0,51,1097	0/0:32,0:32:96.33:0,96,1939	0/0:30,0:30:69.75:0,70,1268	0/0:23,0:23:69.24:0,69,1538	0/0:17,0:17:48.16:0,48,1070	0/0:30,0:30:90.29:0,90,1919	0/0:30,0:29:84.29:0,84,1810	1/1:21,20:58:99:3376,132,0	0/0:30,0:30:90.30:0,90,1941	0/0:12,0:12:33.11:0,33,731	0/0:31,0:31:87.25:0,87,1848	0/0:24,0:24:72.25:0,72,1536	0/0:37,0:37:99:0,111,2370	0/0:28,0:28:81.25:0,81,1721	0/1:30,1:31:12.26:12,0,1651	0/0:23,0:23:69.21:0,69,1417	0/0:21,0:21:60.20:0,60,1212	0/0:21,0:21:60.19:0,60,1210	0/0:16,0:16:45.14:0,45,962	0/0:28,0:28:84.24:0,84,1722	0/0:20,0:20:57.18:0,57,1229	0/0:22,0:21:63.22:0,63,1339	0/0:23,0:23:63.15:0,63,1275	0/0:25,0:25:72.25:0,72,1549	0/0:32,0:32:93.31:0,93,1962	0/0:33,0:33:96.33:0,96,2121	0/0:10,0:10:30.10:0,30,652
chr10	89070924	.	GT	G	3145.47	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=19.415;DP=829;FS=1.690;HRun=1;HaplotypeScore=120.6955;InbreedingCoeff=0.9834;MQ=89.92;MQ0=1;MQRankSum=-6.287;QD=13.22;ReadPosRankSum=3.119;VQSLOD=3.0562;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:95,3:98:99:1295,126,0	1/1:12,0:12:7.44:147,7,0	0/0:34,0:34:98.91:0,99,1493	0/0:33,0:33:86.43:0,86,1305	0/0:17,0:17:27.07:0,27,383	0/0:28,0:28:84.20:0,84,1277	0/0:25,0:25:75.24:0,75,1149	0/0:46,0:46:99:0,129,1941	1/1:60,0:60:99:987,128,0	1/1:18,0:18:45.06:250,45,0	1/1:20,1:20:37.60:218,38,0	0/0:34,0:34:99:0,99,1541	0/0:17,0:17:48.16:0,48,766	0/0:22,0:22:63.21:0,63,1000	0/0:37,0:37:99:0,111,1719	0/0:29,0:29:87.25:0,87,1348	1/1:29,0:29:72.90:433,73,0	0/0:38,0:38:99:0,114,1811	0/0:16,0:16:48.16:0,48,756	0/0:21,0:21:51.06:0,51,732	0/0:44,0:44:99:0,129,2036	0/0:19,0:19:48.09:0,48,713	0/0:21,0:21:58.36:0,58,844	0/0:22,0:22:66.22:0,66,1043	0/0:21,0:20:54.18:0,54,834	0/0:26,0:26:55.07:0,55,973	0/0:27,0:27:81.26:0,81,1267	0/0:14,0:14:42.14:0,42,671
chr10	89070925	.	TG	T	8021.43	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=18.314;DP=805;FS=2.961;HRun=2;HaplotypeScore=101.8479;InbreedingCoeff=0.9995;MQ=90.69;MQ0=1;MQRankSum=-6.094;QD=35.03;ReadPosRankSum=2.890;VQSLOD=5.0795;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,91:94:99:3060,223,0	1/1:0,11:11:30.10:414,30,0	0/0:34,0:34:98.92:0,99,1515	0/0:33,0:33:81.29:0,81,1353	0/0:10,0:10:27.07:0,27,398	0/0:29,0:29:87.26:0,87,1315	0/0:25,0:25:75.24:0,75,1163	0/0:46,0:46:99:0,129,1938	1/1:0,59:59:99:2304,166,0	1/1:0,18:18:48.14:649,48,0	1/1:3,15:17:39.13:545,39,0	0/0:35,0:35:99:0,99,1559	0/0:17,0:17:48.16:0,48,767	0/0:22,0:22:63.21:0,63,997	0/0:36,0:36:99:0,108,1723	0/0:28,1:29:84.29:0,84,1333	1/1:0,29:29:75.25:1049,75,0	0/0:38,0:38:99:0,114,1813	0/0:17,0:17:48.16:0,48,767	0/0:18,0:18:51.14:0,51,737	0/0:43,0:43:99:0,129,2043	0/0:17,0:17:48.15:0,48,730	0/0:20,0:20:60.18:0,60,907	0/0:22,0:22:66.20:0,66,1030	0/0:20,0:19:54.16:0,54,819	0/0:23,1:24:27.25:0,27,968	0/0:27,0:27:81.28:0,81,1291	0/0:14,0:14:42.14:0,42,671
chr10	89071663	.	GGTGTCCCAAA	G	4932.55	PASS	AB=0.962;AC=13;AF=0.232;AN=56;BaseQRankSum=11.383;DP=529;FS=14.321;HRun=0;HaplotypeScore=162.2510;InbreedingCoeff=0.8865;MQ=77.87;MQ0=0;MQRankSum=-11.643;QD=47.89;ReadPosRankSum=2.145;VQSLOD=3.8607;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:36.12:1200,36,0	1/1:0,8:8:24.08:732,24,0	0/0:11,0:11:30.10:0,30,1149	0/0:14,0:14:32.78:0,33,1003	0/0:21,0:21:63.18:0,63,2969	0/0:18,0:18:51.16:0,51,2402	0/0:33,0:33:96.31:0,96,4691	0/0:15,0:15:42.11:0,42,1442	1/1:1,14:15:33.11:1077,33,0	1/1:1,8:9:21.07:700,21,0	1/1:0,5:5:9.03:300,9,0	0/0:36,0:36:99:0,105,5460	0/0:17,0:17:51.13:0,51,2332	0/0:23,0:23:66.23:0,66,3302	0/0:23,0:23:69.24:0,69,3572	0/0:21,0:21:63.22:0,63,3121	1/1:1,15:16:27.09:899,27,0	0/0:26,0:26:75.26:0,75,3949	0/0:15,0:15:45.13:0,45,1840	0/0:15,0:15:45.15:0,45,2383	0/0:33,0:33:99:0,99,4228	0/0:16,0:16:45.15:0,45,1952	0/0:16,0:16:48.16:0,48,2390	0/0:30,0:30:87.28:0,87,4347	0/0:14,0:14:42.14:0,42,2235	0/1:24,1:25:24.74:25,0,3662	0/0:20,0:20:60.19:0,60,3002	0/0:9,0:9:27.09:0,27,1441
chr10	89071819	.	AG	A	676.21	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.820;DP=610;FS=2.734;HRun=2;HaplotypeScore=69.0323;InbreedingCoeff=0.9940;MQ=76.80;MQ0=0;MQRankSum=-6.480;QD=27.05;ReadPosRankSum=-2.802;VQSLOD=2.6414;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,6:6:17.99:211,18,0	0/0:19,0:19:57.19:0,57,851	0/0:18,0:18:50.09:0,50,632	0/0:14,0:14:39.12:0,39,564	0/0:22,0:22:66.22:0,66,986	0/0:15,0:15:45.11:0,45,626	0/0:29,0:29:84.25:0,84,1198	1/1:0,12:12:36.04:413,36,0	1/1:0,6:6:17.96:193,18,0	0/0:15,0:15:45.15:0,45,671	0/0:19,0:19:54:0,54,740	0/0:27,0:27:81.25:0,81,1169	0/0:15,0:15:45.15:0,45,668	0/0:25,0:25:75.25:0,75,1121	0/0:30,0:30:90.30:0,90,1327	0/0:25,0:25:75.23:0,75,1080	0/0:22,0:22:63.20:0,63,914	0/0:33,0:33:96.26:0,96,1367	0/0:27,0:27:78.16:0,78,1030	0/0:26,0:26:75.20:0,75,1020	0/0:15,0:15:42.13:0,42,606	0/0:19,0:19:57.18:0,57,811	0/0:29,0:29:84.25:0,84,1197	0/0:31,0:31:90.28:0,90,1323	0/0:32,0:32:96.18:0,96,1286	0/0:18,0:18:51.16:0,51,742	0/0:33,0:33:93.16:0,93,1274	0/0:27,0:27:81.26:0,81,1191
chr10	89071850	.	A	ACACCCCACCC	1463.76	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.173;DP=619;FS=1.027;HRun=0;HaplotypeScore=187.8901;InbreedingCoeff=0.9563;MQ=83.48;MQ0=0;MQRankSum=-6.196;QD=91.49;ReadPosRankSum=-0.870;VQSLOD=3.5648;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,3:4:9.03:319,9,0	0/0:17,0:17:51.18:0,51,1731	0/0:25,0:25:72.25:0,72,2166	0/0:15,0:15:42.14:0,42,1256	0/0:23,0:23:66.23:0,66,2213	0/0:21,0:21:60.21:0,60,2009	0/0:23,0:23:63.21:0,63,1921	1/1:8,0:8:24.08:881,24,0	1/1:0,2:3:9.03:394,9,0	0/0:18,0:18:54.19:0,54,1812	0/0:23,0:23:63.20:0,63,2027	0/0:28,0:28:84.29:0,84,2813	0/0:22,0:22:66.23:0,66,2211	0/0:26,0:26:78.25:0,78,2483	0/0:26,0:26:75.26:0,75,2536	0/0:27,0:27:81.27:0,81,2668	0/0:23,0:23:69.21:0,69,2220	0/0:32,0:32:96.33:0,96,3029	0/0:23,0:23:69.22:0,69,2154	0/0:22,0:22:63.22:0,63,1995	0/0:15,0:15:45.14:0,45,1434	0/0:28,0:28:84.27:0,84,2773	0/0:26,0:26:78.27:0,78,2594	0/0:30,0:30:87.28:0,87,2673	0/0:28,0:28:81.28:0,81,2750	0/0:26,0:26:78.26:0,78,2432	0/0:26,0:26:78.27:0,78,2647	0/0:30,0:30:87.30:0,87,2946
chr10	89071886	.	AG	A	207.96	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.138;DP=616;FS=2.489;HRun=1;HaplotypeScore=76.0292;InbreedingCoeff=0.9104;MQ=69.01;MQ0=0;MQRankSum=-5.079;QD=5.47;ReadPosRankSum=-0.941;VQSLOD=0.2471;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,4:8:8.57:89,9,0	0/0:10,0:10:30.08:0,30,437	0/0:14,0:14:22.74:0,23,480	0/0:9,0:9:24.08:0,24,358	0/0:26,0:26:75.15:0,75,1093	0/0:26,0:26:75.18:0,75,1076	0/0:25,0:25:75.23:0,75,1106	1/1:20,0:18:3.47:21,3,0	1/1:4,5:9:20.96:222,21,0	0/0:23,0:23:69.21:0,69,1003	0/0:20,0:20:60.12:0,60,888	0/0:26,0:26:78.16:0,78,1122	0/0:19,0:19:57.18:0,57,848	0/0:25,0:25:75.24:0,75,1126	0/0:28,0:28:84.26:0,84,1244	0/0:25,0:25:75.23:0,75,1125	0/0:20,0:20:57.13:0,57,843	0/0:31,0:31:90.21:0,90,1319	0/0:37,0:37:99:0,111,1544	0/0:20,0:20:60.16:0,60,852	0/0:14,0:14:42.10:0,42,595	0/0:27,0:27:75.22:0,75,1105	0/0:22,0:22:66.19:0,66,965	0/0:28,0:28:84.26:0,84,1263	0/0:24,0:24:72.24:0,72,1098	0/0:29,0:29:87.29:0,87,1314	0/0:28,0:28:78.26:0,78,1193	0/0:22,0:22:66.13:0,66,915
chr10	89071902	.	C	CTGAACACG	3741.93	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.699;DP=580;FS=1.382;HRun=0;HaplotypeScore=152.0264;InbreedingCoeff=0.9722;MQ=69.31;MQ0=0;MQRankSum=-9.212;QD=95.95;ReadPosRankSum=-4.560;VQSLOD=3.1060;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,4:8:15.05:577,15,0	0/0:5,0:5:15.03:0,15,355	0/0:11,0:11:30.10:0,30,794	0/0:12,0:12:10.11:0,10,548	0/0:23,0:23:63.10:0,63,1594	0/0:33,0:33:93.32:0,93,2571	0/0:23,0:23:69.23:0,69,1787	1/1:15,0:16:45.12:1522,45,0	1/1:5,9:14:42.12:1643,42,0	0/0:18,0:18:48.15:0,48,1300	0/0:17,0:17:51.17:0,51,1352	0/0:27,0:27:78.27:0,78,2131	0/0:22,0:22:63.22:0,63,1697	0/0:23,0:23:63.19:0,63,1662	0/0:28,0:28:78.27:0,78,2041	0/0:23,0:23:63.19:0,63,1657	0/0:17,0:17:48.12:0,48,1235	0/0:32,0:32:87.30:0,87,2400	0/0:36,0:36:99:0,108,2586	0/0:17,0:17:51.14:0,51,1285	0/0:14,0:14:42.13:0,42,1018	0/0:22,0:22:66.21:0,66,1773	0/0:19,0:19:54.19:0,54,1507	0/0:26,0:26:78.24:0,78,2044	0/0:26,0:26:75.24:0,75,1882	0/0:26,0:26:78.27:0,78,2140	0/0:27,0:27:66.20:0,66,1670	0/0:14,0:14:42.13:0,42,1040
chr10	89071925	.	GA	G	1333.16	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=9.870;DP=579;FS=24.540;HRun=4;HaplotypeScore=65.3678;InbreedingCoeff=0.8846;MQ=77.18;MQ0=0;MQRankSum=-7.799;QD=22.22;ReadPosRankSum=-0.262;VQSLOD=1.8783;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,12:13:24.07:288,24,0	0/0:5,0:5:12.01:0,12,147	0/0:17,0:17:45.13:0,45,611	0/1:13,0:13:2.02:2,0,242	0/0:22,0:22:66.22:0,66,921	0/0:30,0:30:87.28:0,87,1199	0/0:22,0:22:54.16:0,54,723	1/1:1,16:17:48.15:576,48,0	1/1:0,17:17:51.16:611,51,0	0/0:22,0:22:63.20:0,63,867	0/0:15,0:15:39.13:0,39,545	0/0:29,0:29:87.29:0,87,1217	0/0:27,0:27:78.26:0,78,1090	0/0:22,0:22:66.22:0,66,924	0/0:29,0:29:81.27:0,81,1124	0/0:20,0:20:60.19:0,60,825	0/0:17,0:17:45.12:0,45,609	0/0:25,0:25:75.25:0,75,1049	0/0:31,0:31:93.31:0,93,1301	0/0:18,0:18:48.16:0,48,669	0/0:16,0:16:45.12:0,45,593	0/0:23,0:23:63.21:0,63,882	0/0:15,0:15:45.15:0,45,629	0/0:27,0:27:78.26:0,78,1091	0/0:18,0:18:54.18:0,54,754	0/0:30,0:30:84.28:0,84,1173	0/0:25,0:25:66.22:0,66,922	0/0:14,0:14:42.14:0,42,588
chr10	89072316	.	AG	A	2879.78	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.873;DP=557;FS=27.514;HRun=6;HaplotypeScore=68.1731;InbreedingCoeff=0.9919;MQ=74.60;MQ0=0;MQRankSum=-0.764;QD=21.02;ReadPosRankSum=2.191;VQSLOD=2.0131;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,20:30:48.11:511,48,0	1/1:0,10:10:21.05:220,21,0	0/0:14,0:14:42.06:0,42,516	0/0:13,0:13:30.77:0,31,415	0/0:15,0:15:42.09:0,42,549	0/0:22,0:22:63.14:0,63,779	0/0:44,0:44:99:0,115,1470	1/1:6,10:16:27:289,27,0	1/1:6,11:17:37.80:369,38,0	1/1:1,12:13:30.07:320,30,0	1/1:6,6:12:23.89:239,24,0	0/0:19,0:20:56.56:0,57,680	0/0:27,0:27:75.20:0,75,937	0/0:19,0:19:54.12:0,54,675	0/0:21,0:21:63.20:0,63,828	0/0:28,0:28:81.26:0,81,1052	1/1:15,24:39:99:1130,108,0	0/0:28,0:28:81.24:0,81,1046	0/0:15,0:15:39.08:0,39,450	0/0:15,0:15:39.13:0,39,511	0/0:42,0:42:99:0,108,1308	0/0:15,0:15:45.15:0,45,588	0/0:13,0:13:33.03:0,33,356	0/0:31,0:31:93.29:0,93,1205	0/0:13,0:13:30.09:0,30,383	0/0:8,0:8:21.07:0,21,275	0/0:12,0:12:30.09:0,30,379	0/0:5,0:5:12.04:0,12,158
chr10	89073143	.	C	CA	3969.55	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=12.936;DP=802;FS=10.788;HRun=1;HaplotypeScore=85.1534;InbreedingCoeff=0.9992;MQ=85.37;MQ0=0;MQRankSum=-2.102;QD=44.11;ReadPosRankSum=3.071;VQSLOD=2.5792;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,62:63:99:2765,175,0	0/0:16,0:16:48.16:0,48,671	0/0:21,0:21:63.19:0,63,860	0/0:28,0:29:72.05:0,72,872	0/0:21,0:21:63.21:0,63,880	0/0:21,0:21:60.20:0,60,839	0/0:44,0:44:99:0,129,1770	0/0:26,0:26:75.24:0,75,1033	1/1:1,26:27:39.32:1205,39,0	0/0:39,0:39:99:0,114,1579	0/0:12,0:12:36.12:0,36,496	0/0:36,0:36:99:0,102,1404	0/0:31,0:31:90.30:0,90,1258	0/0:31,0:31:93.30:0,93,1280	0/0:29,0:29:87.29:0,87,1217	0/0:15,0:15:45.15:0,45,630	0/0:58,0:58:99:0,166,2307	0/0:30,0:30:78.25:0,78,1074	0/0:26,0:26:75.23:0,75,1017	0/0:14,0:14:42.14:0,42,587	0/0:42,0:42:99:0,123,1717	0/0:21,0:21:63.21:0,63,879	0/0:9,0:9:27.09:0,27,377	0/0:48,0:48:99:0,138,1895	0/0:28,0:28:84.27:0,84,1158	0/0:36,0:36:99:0,105,1449	0/0:18,0:18:54.18:0,54,754	0/0:11,0:11:33.11:0,33,462
chr10	89073699	.	CAAA	C	1570.10	PASS	AB=0.793;AC=13;AF=0.232;AN=56;BaseQRankSum=11.394;DP=488;FS=1.608;HRun=18;HaplotypeScore=81.0860;InbreedingCoeff=0.7678;MQ=67.51;MQ0=6;MQRankSum=0.201;QD=11.99;ReadPosRankSum=8.722;VQSLOD=0.4569;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:31:37.11:224,37,0	1/1:2,4:6:8.24:87,8,0	0/0:27,0:15:16.41:0,16,137	0/0:20,0:14:7.04:0,7,37	0/0:14,0:16:41.99:0,42,472	0/0:12,0:16:44.97:0,45,489	0/0:13,0:18:43.21:0,43,466	0/0:15,0:18:3.09:0,3,40	1/1:3,0:12:17.40:103,17,0	1/1:2,11:13:33.03:323,33,0	1/1:1,11:12:29.90:294,30,0	0/0:14,0:16:33.01:0,33,367	0/0:16,0:18:45:0,45,499	0/0:14,0:14:33.02:0,33,362	0/0:13,0:13:24.01:0,24,279	0/0:18,0:20:32.22:0,32,500	1/1:5,29:34:71.48:705,71,0	0/0:17,0:17:45.07:0,45,545	0/0:17,0:17:9.65:0,10,238	0/0:8,0:7:14.80:0,15,101	0/0:12,0:14:20.06:0,20,240	0/0:15,1:17:6.53:0,7,324	0/0:12,0:15:29.92:0,30,302	0/0:22,0:21:44.77:0,45,470	0/0:12,1:15:1.83:0,2,317	0/0:20,0:20:10.35:0,10,341	0/1:17,1:22:16.91:17,0,313	0/0:10,0:14:38.91:0,39,408
chr10	89074544	.	AG	A	3402.11	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.323;DP=675;FS=0.898;HRun=1;HaplotypeScore=71.8886;InbreedingCoeff=0.9966;MQ=86.69;MQ0=0;MQRankSum=-0.829;QD=39.10;ReadPosRankSum=1.043;VQSLOD=4.2835;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1653	1/1:0,8:8:21.07:294,21,0	0/0:26,0:26:72.24:0,72,1105	0/0:18,0:18:54.13:0,54,779	0/0:18,0:18:51.16:0,51,792	0/0:17,0:17:48.16:0,48,763	0/0:36,0:36:99:0,108,1722	0/0:31,0:31:90.30:0,90,1411	0/0:33,0:33:99:0,99,1547	1/1:0,26:26:78.22:1053,78,0	1/1:0,15:15:45.15:629,45,0	0/0:23,0:23:66.23:0,66,1055	0/0:31,0:31:93.32:0,93,1482	0/0:32,0:32:96.31:0,96,1507	0/0:18,0:18:51.17:0,51,815	0/0:26,0:26:78.27:0,78,1247	1/1:0,38:38:99:1426,102,0	0/0:23,0:23:66.23:0,66,1055	0/0:17,0:17:51.17:0,51,812	0/0:14,0:14:39.13:0,39,623	0/0:45,0:44:99:0,129,2032	0/0:18,0:18:54.18:0,54,863	0/0:19,0:19:57.19:0,57,911	0/0:37,0:36:99:0,111,1716	0/0:13,0:13:39.13:0,39,622	0/0:28,1:29:45.30:0,45,1256	0/0:23,0:23:66.23:0,66,1055	0/0:6,0:6:18.06:0,18,288
chr10	89075180	.	CTGTT	C	2761.03	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.183;DP=617;FS=1.138;HRun=0;HaplotypeScore=112.7591;InbreedingCoeff=0.9931;MQ=81.58;MQ0=0;MQRankSum=-2.616;QD=45.26;ReadPosRankSum=3.567;VQSLOD=4.3921;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:37:90.31:1720,90,0	0/0:10,0:10:24.08:0,24,651	0/0:17,0:17:48.13:0,48,1134	0/0:16,0:16:39.13:0,39,1007	0/0:15,0:15:45.15:0,45,1233	0/0:21,0:21:63.22:0,63,1716	0/0:31,0:31:93.32:0,93,2542	0/0:27,0:27:78.26:0,78,2042	1/1:2,22:24:60.21:1162,60,0	0/0:25,0:25:75.26:0,75,2040	0/0:9,0:9:24.08:0,24,628	0/0:23,0:23:66.23:0,66,1794	0/0:15,0:15:24.16:0,24,1101	0/0:23,0:23:66.23:0,66,1779	0/0:21,0:21:63.22:0,63,1657	0/0:20,0:20:60.21:0,60,1615	0/0:35,0:35:99:0,102,2784	0/0:32,0:32:96.33:0,96,2590	0/0:21,0:21:54.19:0,54,1478	0/0:10,0:10:27.09:0,27,734	0/0:57,0:57:99:0,166,4383	0/0:22,0:22:66.20:0,66,1737	0/0:8,0:8:24.08:0,24,626	0/0:39,0:39:99:0,114,3025	0/0:14,0:14:42.10:0,42,1064	0/0:25,0:25:75.26:0,75,2028	0/0:12,0:11:36.12:0,36,976	0/0:8,0:8:21.07:0,21,575
chr10	89075906	.	CT	C	653.41	PASS	AB=0.857;AC=12;AF=0.214;AN=56;BaseQRankSum=6.019;DP=521;FS=1.606;HRun=12;HaplotypeScore=65.0010;InbreedingCoeff=0.1131;MQ=76.83;MQ0=3;MQRankSum=-1.255;QD=3.46;ReadPosRankSum=1.270;VQSLOD=-0.1254;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,33:45:76.72:586,77,0	0/0:10,0:11:9.91:0,10,241	0/0:55,0:33:28.29:0,28,403	0/1:40,0:20:20.81:21,0,109	0/0:12,0:13:20.82:0,21,180	0/1:8,2:10:16.42:16,0,208	0/0:16,3:19:1.63:0,2,380	1/1:6,0:18:20.11:57,20,0	0/1:3,8:11:15.52:78,0,16	0/0:20,1:22:21.01:0,21,423	0/0:10,1:11:0.80:0,1,183	0/0:21,0:22:44.85:0,45,477	0/0:10,0:11:29.88:0,30,277	0/0:15,0:15:42.04:0,42,411	0/1:8,2:10:16.63:17,0,190	0/1:12,2:14:7.40:7,0,281	0/0:25,1:26:33.87:0,34,520	0/0:21,0:21:51.10:0,51,517	0/1:12,1:13:0.08:0,0,269	0/0:8,1:9:0.80:0,1,183	0/0:7,0:8:15.03:0,15,152	0/0:18,1:20:17.96:0,18,381	0/1:8,1:9:2.19:2,0,162	0/0:25,1:26:39.68:0,40,562	0/0:18,1:19:21.82:0,22,391	0/0:12,1:13:9.69:0,10,261	0/1:17,2:19:16.08:16,0,333	0/0:9,2:11:3.82:0,4,214
chr10	89076102	.	GC	G	906.73	PASS	AB=0.925;AC=11;AF=0.196;AN=56;BaseQRankSum=6.479;DP=419;FS=15.499;HRun=9;HaplotypeScore=47.2049;InbreedingCoeff=0.5810;MQ=70.11;MQ0=0;MQRankSum=-0.076;QD=10.30;ReadPosRankSum=1.129;VQSLOD=0.7575;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:29:38.74:0,39,688	1/1:1,2:3:4.18:52,4,0	0/1:8,0:8:32.48:32,0,46	0/0:6,1:5:11.97:0,12,122	0/0:6,0:6:15.03:0,15,159	0/0:12,0:12:24.07:0,24,277	0/0:14,0:14:42.09:0,42,462	0/0:0,0:19:30.43:0,30,141	0/1:16,2:18:0.77:1,0,491	1/1:3,9:12:23.99:214,24,0	1/1:1,3:4:9:82,9,0	0/0:27,0:27:69.19:0,69,784	0/0:12,0:12:36.09:0,36,402	0/0:19,1:20:0.58:0,1,466	0/0:22,0:22:60.17:0,60,684	0/0:16,0:16:48.14:0,48,554	1/1:5,31:36:61.61:670,62,0	0/0:13,1:14:11.64:0,12,377	0/0:9,0:9:12.02:0,12,129	0/0:6,0:6:18.05:0,18,208	0/0:46,0:46:99:0,108,1223	0/0:6,0:6:18.04:0,18,198	0/1:6,1:7:9.40:9,0,135	0/0:21,0:21:33.13:0,33,612	0/0:12,0:12:24.03:0,24,261	0/0:14,0:14:19.75:0,20,411	0/0:16,0:16:30.08:0,30,335	0/0:3,0:3:9.03:0,9,103
chr10	89078078	.	ACT	A	1229.25	PASS	AB=0.853;AC=23;AF=0.479;AN=48;BaseQRankSum=3.367;DP=656;FS=11.038;HRun=0;HaplotypeScore=116.4186;InbreedingCoeff=0.3784;MQ=71.46;MQ0=27;MQRankSum=-0.899;QD=4.24;ReadPosRankSum=5.121;VQSLOD=1.3834;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:45:14.20:70,14,0	./.	0/0:72,0:26:0:0,0,1	0/0:106,0:46:0.47:0,0,1	0/0:13,0:13:6:0,6,68	0/0:26,0:26:24.07:0,24,303	0/0:13,0:19:8.99:0,9,76	./.	1/1:14,0:26:31.25:154,31,0	./.	./.	0/0:14,0:14:8.62:0,9,112	0/1:11,6:17:35.32:56,0,35	0/0:12,0:18:6.01:0,6,70	1/1:9,5:16:17.71:157,18,0	1/1:12,10:21:18.05:194,18,0	1/1:13,0:17:5.68:28,6,0	0/1:8,1:18:7.83:8,0,179	0/1:21,1:21:11.27:11,0,205	0/0:18,0:18:3:0,3,27	0/0:26,0:26:21:0,21,240	0/0:10,0:14:6.01:0,6,70	1/1:10,0:10:3.01:32,3,0	1/1:17,7:25:26.90:272,27,0	0/1:18,2:20:23.28:23,0,78	1/1:10,4:15:10.96:109,11,0	0/1:12,7:20:50.05:181,0,50	1/1:13,4:17:9.02:97,9,0
chr10	89078189	.	AGAAG	A	1328.05	PASS	AB=0.951;AC=22;AF=0.478;AN=46;BaseQRankSum=6.127;DP=527;FS=1.401;HRun=0;HaplotypeScore=100.3515;InbreedingCoeff=0.5408;MQ=67.20;MQ0=6;MQRankSum=-1.609;QD=5.03;ReadPosRankSum=1.695;VQSLOD=1.8439;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:49,0:52:23.67:265,24,0	./.	./.	./.	0/0:14,0:23:13.15:0,13,90	0/0:19,0:19:17.25:0,17,205	0/0:14,0:14:11.97:0,12,109	./.	1/1:31,0:34:23.13:216,23,0	1/1:21,0:21:5.96:51,6,0	1/1:11,0:11:7.08:49,7,0	0/1:14,1:15:24.54:25,0,353	1/1:16,2:17:15.04:207,15,0	0/0:19,0:19:39.04:0,39,657	0/0:18,0:18:26.99:0,27,310	0/0:24,0:24:6.15:0,6,595	1/1:9,0:9:3.01:31,3,0	0/1:14,1:14:27.33:27,0,223	1/1:9,4:13:12.04:182,12,0	1/1:9,6:15:14.44:197,14,0	0/0:25,0:24:42.05:0,42,728	0/0:20,0:20:18.04:0,18,365	0/0:14,0:14:15.04:0,15,303	0/0:26,0:26:14.20:0,14,817	0/1:12,1:13:27.66:28,0,128	0/1:17,0:17:25.74:26,0,420	1/1:17,12:30:14.75:202,15,0	./.
chr10	89078713	.	CCT	C	1585.97	PASS	AB=0.685;AC=2;AF=0.036;AN=56;BaseQRankSum=8.891;DP=767;FS=1.063;HRun=0;HaplotypeScore=98.1782;InbreedingCoeff=-0.0373;MQ=80.29;MQ0=5;MQRankSum=-0.061;QD=11.66;ReadPosRankSum=2.332;VQSLOD=3.0344;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:54,33:86:99:809,0,1590	0/0:12,0:12:24.08:0,24,384	0/0:48,1:39:36.58:0,37,1034	0/0:45,0:34:55.64:0,56,767	0/0:22,0:23:66.22:0,66,1057	0/0:21,0:21:57.18:0,57,911	0/0:22,0:22:51.17:0,51,837	0/0:20,0:20:39.13:0,39,622	0/1:22,27:49:99:866,0,794	0/0:26,0:26:29.77:0,30,966	0/0:18,0:18:51.17:0,51,837	0/0:18,0:18:42.14:0,42,683	0/0:25,0:25:63.21:0,63,1022	0/0:25,0:25:69.22:0,69,1106	0/0:36,0:36:99:0,99,1587	0/0:16,0:16:45.15:0,45,735	0/0:26,0:26:63.22:0,63,1030	0/0:22,0:22:66.18:0,66,1050	0/0:20,0:20:57.19:0,57,926	0/0:21,0:21:57.19:0,57,929	0/0:15,0:15:39.13:0,39,635	0/0:28,0:28:69.21:0,69,1075	0/0:27,0:27:69.24:0,69,1123	0/0:27,0:27:69.24:0,69,1131	0/0:29,0:29:78.25:0,78,1248	0/0:19,0:19:45.14:0,45,708	0/0:34,0:34:81.28:0,81,1309	0/0:7,0:7:21.04:0,21,295
chr10	89079257	.	A	AGAGGGGG	3943.35	PASS	AB=0.669;AC=2;AF=0.036;AN=56;BaseQRankSum=0.598;DP=669;FS=0.634;HRun=0;HaplotypeScore=162.7152;InbreedingCoeff=-0.0371;MQ=75.47;MQ0=0;MQRankSum=-9.334;QD=37.92;ReadPosRankSum=2.087;VQSLOD=3.6424;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:34,26:65:99:2200,0,2197	0/0:11,0:11:33.11:0,33,922	0/0:22,0:22:62.66:0,63,1336	0/0:20,0:20:50.67:0,51,1322	0/0:15,0:15:45.15:0,45,1181	0/0:18,0:18:54.19:0,54,1471	0/0:33,0:33:99:0,99,2653	0/0:28,0:28:81.27:0,81,2113	0/1:19,20:39:99:1743,0,1336	0/0:25,0:25:75.25:0,75,1979	0/0:16,0:16:48.16:0,48,1219	0/0:26,0:26:75.26:0,75,1942	0/0:29,0:29:87.27:0,87,2281	0/0:15,0:15:45.15:0,45,1185	0/0:21,0:21:63.22:0,63,1694	0/0:20,0:20:60.21:0,60,1509	0/0:37,0:37:99:0,111,2833	0/0:27,0:27:81.28:0,81,2087	0/0:18,0:18:48.15:0,48,1058	0/0:9,0:9:27.09:0,27,743	0/0:37,0:37:99:0,111,2745	0/0:14,0:14:42.14:0,42,1105	0/0:13,0:13:39.13:0,39,973	0/0:20,0:20:60.12:0,60,1485	0/0:14,0:14:42.14:0,42,1107	0/0:30,0:30:87.30:0,87,2269	0/0:32,0:32:93.28:0,93,2394	0/0:15,0:15:45.15:0,45,1042
chr10	89079639	.	G	GTTCCTTTAT	1320.65	PASS	AB=0.731;AC=3;AF=0.054;AN=56;BaseQRankSum=4.718;DP=655;FS=3.782;HRun=0;HaplotypeScore=192.1636;InbreedingCoeff=-0.0570;MQ=78.17;MQ0=0;MQRankSum=-4.048;QD=42.60;ReadPosRankSum=1.163;VQSLOD=3.3215;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:67,0:67:99:0,199,6225	0/1:3,2:5:99:235,0,261	0/0:12,0:12:32.83:0,33,841	0/0:21,0:21:52.96:0,53,1440	0/0:19,0:19:54.17:0,54,1634	0/0:21,0:21:60.18:0,60,1813	0/0:45,0:45:99:0,132,4243	0/0:21,0:21:23.18:0,23,1405	0/0:37,0:37:99:0,108,3265	0/1:12,6:18:99:835,0,873	0/1:5,3:8:99:351,0,312	0/0:33,0:33:93.30:0,93,2813	0/0:19,0:19:54.14:0,54,1545	0/0:31,0:31:93.32:0,93,2960	0/0:25,0:24:75.26:0,75,2343	0/0:17,0:17:51.18:0,51,1643	0/0:22,0:22:51.08:0,51,1420	0/0:25,0:25:72.23:0,72,2262	0/0:21,0:21:63.21:0,63,1915	0/0:9,0:9:24.08:0,24,783	0/0:45,0:45:99:0,129,3972	0/0:26,0:26:72.21:0,72,2043	0/0:9,0:9:27.09:0,27,880	0/0:24,0:24:69.24:0,69,2175	0/0:19,0:19:57.19:0,57,1731	0/0:29,0:29:81.28:0,81,2515	0/0:20,0:20:60.21:0,60,1906	0/0:7,0:7:21.07:0,21,685
chr10	89079640	.	G	GGGCTCAGA	1216.96	PASS	AB=0.838;AC=5;AF=0.089;AN=56;BaseQRankSum=4.936;DP=652;FS=9.964;HRun=0;HaplotypeScore=177.4148;InbreedingCoeff=-0.0984;MQ=77.67;MQ0=0;MQRankSum=-3.590;QD=16.45;ReadPosRankSum=-1.444;VQSLOD=1.8569;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:67,0:67:99:0,196,5441	0/1:3,2:5:99:203,0,160	0/0:11,0:11:27.08:0,27,579	0/0:21,0:21:49.53:0,50,975	0/0:19,0:19:51.16:0,51,1379	0/0:21,0:21:60.18:0,60,1593	0/0:46,0:46:99:0,135,3477	0/1:21,0:21:66.84:67,0,598	0/0:36,0:36:99:0,105,2672	0/1:12,6:18:99:681,0,350	0/1:5,3:8:85.09:329,0,85	0/0:32,0:32:96.28:0,96,2421	0/0:19,0:19:45.15:0,45,1205	0/0:31,0:31:93.29:0,93,2549	0/0:25,0:24:75.21:0,75,1915	0/0:17,0:17:51.17:0,51,1382	0/1:22,0:22:54.78:55,0,692	0/0:25,0:25:75.22:0,75,1975	0/0:22,0:22:63.17:0,63,1520	0/0:9,0:9:24.08:0,24,685	0/0:44,0:44:99:0,132,3378	0/0:25,0:25:72.14:0,72,1737	0/0:9,0:9:27.08:0,27,689	0/0:24,0:24:69.20:0,69,1868	0/0:19,0:19:57.14:0,57,1405	0/0:29,0:29:81.23:0,81,2098	0/0:20,0:20:60.18:0,60,1596	0/0:7,0:7:21.07:0,21,597
chr10	89080790	.	G	GA	1023.34	PASS	AB=0.768;AC=2;AF=0.036;AN=56;BaseQRankSum=9.869;DP=808;FS=5.061;HRun=3;HaplotypeScore=100.8246;InbreedingCoeff=-0.0373;MQ=81.38;MQ0=0;MQRankSum=-8.335;QD=8.90;ReadPosRankSum=0.611;VQSLOD=0.9629;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:51,19:70:99:556,0,1866	0/0:7,0:7:21.07:0,21,293	0/0:29,0:29:87.26:0,87,1164	0/0:24,0:24:56.60:0,57,822	0/0:13,0:13:39.13:0,39,543	0/0:16,0:16:48.16:0,48,670	0/0:40,0:40:99:0,117,1634	0/0:36,0:36:99:0,108,1507	0/1:30,15:45:99:556,0,958	0/0:28,0:28:84.27:0,84,1160	0/0:13,0:13:39.13:0,39,542	0/0:38,0:38:99:0,111,1533	0/0:25,0:25:75.25:0,75,1046	0/0:44,0:44:99:0,132,1825	0/0:38,0:38:99:0,114,1594	0/0:36,0:36:99:0,105,1451	0/0:27,0:27:75.25:0,75,1048	0/0:16,0:16:48.16:0,48,671	0/0:28,0:28:84.28:0,84,1174	0/0:12,0:12:36.12:0,36,502	0/0:71,0:71:99:0,211,2879	0/0:15,0:15:45.15:0,45,629	0/0:19,0:19:57.17:0,57,779	0/0:48,0:48:99:0,135,1886	0/0:16,0:16:48.16:0,48,671	0/0:21,0:21:63.20:0,63,864	0/0:25,0:25:75.25:0,75,1039	0/0:8,0:8:24.08:0,24,335
chr10	89080847	.	G	GC	2535.52	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-10.436;DP=826;FS=2.078;HRun=5;HaplotypeScore=105.9007;InbreedingCoeff=0.9994;MQ=79.14;MQ0=0;MQRankSum=1.457;QD=30.18;ReadPosRankSum=1.350;VQSLOD=3.5313;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:74,0:74:99:0,153,1418	1/1:0,10:10:27.09:355,27,0	0/0:30,0:30:78.07:0,78,808	0/0:29,0:29:58.27:0,58,720	0/0:22,0:22:54.13:0,54,580	0/0:21,0:21:60.15:0,60,645	0/0:39,0:39:99:0,108,1160	0/0:26,0:26:63.15:0,63,671	0/0:62,0:62:99:0,159,1140	1/1:2,25:28:78.25:1004,78,0	1/1:0,17:17:39.13:511,39,0	0/0:33,0:33:96.21:0,96,1015	0/0:29,0:29:84.21:0,84,902	0/0:35,0:35:99:0,105,1110	0/0:37,0:37:99:0,108,1160	0/0:36,0:36:99:0,105,1128	1/1:6,23:29:63.20:826,63,0	0/0:14,0:14:42.11:0,42,451	0/0:17,0:17:48.08:0,48,498	0/0:17,0:17:51.10:0,51,538	0/0:57,0:57:99:0,156,1667	0/0:22,0:22:66.17:0,66,709	0/0:15,0:15:42.11:0,42,451	0/0:38,0:38:99:0,105,1116	0/0:26,0:26:72.18:0,72,772	0/0:27,1:28:44.74:0,45,831	0/0:25,0:25:60.15:0,60,645	0/0:10,0:10:27.03:0,27,279
chr10	89080851	.	CCT	C	1494.89	PASS	AB=0.720;AC=2;AF=0.036;AN=56;BaseQRankSum=10.414;DP=834;FS=4.346;HRun=0;HaplotypeScore=124.3597;InbreedingCoeff=-0.0371;MQ=80.36;MQ0=0;MQRankSum=-10.961;QD=10.68;ReadPosRankSum=0.194;VQSLOD=3.3998;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:54,20:74:99:352,0,2059	0/0:10,0:10:27.05:0,27,274	0/0:31,0:31:87.18:0,87,1365	0/0:31,0:31:84.07:0,84,1262	0/0:20,0:20:57.20:0,57,1032	0/0:23,0:23:69.21:0,69,1173	0/0:38,0:38:99:0,111,1944	0/0:25,0:25:66.17:0,66,1080	0/1:31,35:66:99:1231,0,1319	0/0:31,0:31:87.65:0,88,910	0/0:17,0:17:39.08:0,39,397	0/0:34,0:34:96.29:0,96,1707	0/0:28,0:28:81.28:0,81,1455	0/0:35,0:35:99:0,102,1789	0/0:39,0:39:99:0,111,1888	0/0:36,0:36:99:0,108,1924	0/0:28,0:28:75.15:0,75,816	0/0:15,0:15:42.13:0,42,732	0/0:20,0:20:57.16:0,57,937	0/0:20,0:20:57.15:0,57,945	0/0:53,0:53:99:0,153,2696	0/0:23,0:23:69.22:0,69,1204	0/0:15,0:15:45.14:0,45,787	0/0:37,0:37:99:0,108,1960	0/0:24,0:24:66.23:0,66,1198	0/0:28,0:28:84.28:0,84,1489	0/0:23,0:23:63.22:0,63,1134	0/0:10,0:10:27.09:0,27,489
chr10	89081414	.	TG	T	2393.30	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.188;DP=791;FS=3.391;HRun=4;HaplotypeScore=103.4117;InbreedingCoeff=0.9908;MQ=88.56;MQ0=0;MQRankSum=1.101;QD=30.68;ReadPosRankSum=2.321;VQSLOD=3.6408;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:95,0:95:99:0,262,3485	1/1:0,8:8:24.07:288,24,0	0/0:26,0:26:75.19:0,75,1000	0/0:34,0:34:90.25:0,90,1183	0/0:16,0:16:45.15:0,45,627	0/0:16,0:16:48.16:0,48,672	0/0:37,0:37:99:0,102,1393	0/0:29,0:29:87.28:0,87,1189	0/0:72,0:72:99:0,190,2640	1/1:3,16:19:54.17:647,54,0	1/1:0,14:14:33.10:396,33,0	0/0:30,0:30:90.28:0,90,1226	0/0:28,0:28:78.25:0,78,1076	0/0:30,0:30:87.29:0,87,1218	0/0:31,0:31:87.29:0,87,1218	0/0:30,0:30:84.27:0,84,1160	1/1:3,34:37:99:1222,102,0	0/0:16,0:16:45.15:0,45,630	0/0:17,0:17:51.17:0,51,714	0/0:12,0:12:36.12:0,36,504	0/0:62,0:62:99:0,181,2445	0/0:20,0:20:54.18:0,54,751	0/0:17,0:17:51.17:0,51,714	0/0:21,0:21:63.17:0,63,831	0/0:14,0:14:42.14:0,42,587	0/0:37,2:39:42.37:0,42,1440	0/0:17,0:17:51.07:0,51,654	0/0:4,0:4:12.04:0,12,168
chr10	89081596	.	T	TTG	553.31	PASS	AB=0.992;AC=23;AF=0.523;AN=44;BaseQRankSum=-0.604;DP=647;FS=5.738;HRun=0;HaplotypeScore=131.1379;InbreedingCoeff=0.2319;MQ=64.31;MQ0=8;MQRankSum=0.165;QD=1.87;ReadPosRankSum=-1.630;VQSLOD=1.9467;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:10,0:10:0.47:0,0,1	./.	./.	1/1:18,0:18:2.99:24,3,0	0/0:17,0:18:2.73:0,3,14	0/0:29,0:31:3.36:0,3,34	./.	0/0:49,0:52:6.82:0,7,40	0/1:22,0:22:0:1,0,0	1/1:15,0:15:5.94:48,6,0	0/1:20,0:19:8.12:17,0,8	0/0:16,0:16:3.01:0,3,31	1/1:11,4:15:6.02:87,6,0	1/1:19,0:19:2.67:11,3,0	0/0:22,0:22:14.97:0,15,143	1/1:30,0:30:5.57:83,6,0	0/1:22,1:23:19:78,0,19	1/1:19,0:19:2.75:37,3,0	1/1:19,0:19:6.01:66,6,0	0/1:52,0:52:14.35:14,0,42	1/1:13,0:15:9.02:104,9,0	./.	0/0:27,0:27:11.49:0,11,119	0/1:13,0:13:22.44:75,0,22	0/0:33,0:33:1.58:0,2,11	1/1:12,2:14:3.01:44,3,0	./.
chr10	89082475	.	G	GCA	3505.88	PASS	AB=0.680;AC=4;AF=0.071;AN=56;BaseQRankSum=-5.473;DP=588;FS=1.526;HRun=0;HaplotypeScore=78.4840;InbreedingCoeff=0.4503;MQ=83.39;MQ0=0;MQRankSum=-1.270;QD=25.78;ReadPosRankSum=-0.225;VQSLOD=4.4003;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:37,36:74:99:1656,0,1296	0/0:10,0:10:30.10:0,30,430	0/0:12,0:12:30.10:0,30,429	0/0:21,0:22:48.66:0,49,662	0/0:16,0:16:48.16:0,48,686	0/0:17,0:17:48.16:0,48,686	0/0:29,0:29:81.27:0,81,1157	1/1:0,19:19:54.19:984,54,0	0/1:24,19:43:99:867,0,861	0/0:20,0:20:57.19:0,57,814	0/0:12,0:12:36.12:0,36,515	0/0:23,0:23:63.21:0,63,903	0/0:9,0:9:24.05:0,24,323	0/0:24,0:24:72.24:0,72,1031	0/0:19,0:19:57.17:0,57,796	0/0:14,0:14:42.14:0,42,601	0/0:27,0:27:75.25:0,75,1075	0/0:40,0:40:99:0,120,1720	0/0:17,0:17:51.17:0,51,725	0/0:12,0:12:36.11:0,36,497	0/0:40,0:40:99:0,114,1632	0/0:8,0:8:24.08:0,24,344	0/0:8,0:8:21.07:0,21,299	0/0:22,0:22:63.16:0,63,861	0/0:15,0:15:42.14:0,42,602	0/0:20,0:20:54.16:0,54,739	0/0:11,0:11:27.07:0,27,368	0/0:5,0:5:12.04:0,12,172
chr10	89083115	.	TAAATA	T	2569.81	PASS	AB=0.722;AC=5;AF=0.089;AN=56;BaseQRankSum=10.070;DP=499;FS=6.253;HRun=0;HaplotypeScore=98.5881;InbreedingCoeff=0.3271;MQ=59.76;MQ0=0;MQRankSum=-6.458;QD=25.19;ReadPosRankSum=-3.452;VQSLOD=2.2303;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:7,30:37:99:957,0,226	0/0:9,0:9:27.09:0,27,696	0/0:6,0:6:9.03:0,9,253	0/0:12,0:9:15.52:0,16,421	0/0:23,0:23:66.22:0,66,1720	0/0:12,0:12:36.12:0,36,1089	0/0:9,0:9:27.09:0,27,775	1/1:2,28:31:77.76:1372,78,0	0/1:8,8:16:99:347,0,408	0/0:18,0:18:48.16:0,48,1359	0/0:24,0:24:72.25:0,72,2011	0/0:22,0:22:66.22:0,66,1686	0/0:15,0:15:36.12:0,36,928	0/0:17,0:17:48.16:0,48,1227	0/0:11,0:11:30.10:0,30,898	0/1:17,1:18:16.89:17,0,1114	0/0:28,0:28:72.25:0,72,2125	0/0:31,0:31:93.32:0,93,2591	0/0:31,0:31:84.26:0,84,2180	0/0:13,0:13:36.12:0,36,1024	0/0:11,0:11:30.10:0,30,610	0/0:6,0:6:18.06:0,18,461	0/0:10,0:10:30.10:0,30,658	0/0:12,0:12:33.11:0,33,887	0/0:18,0:18:51.17:0,51,1484	0/0:26,0:26:72.25:0,72,2048	0/0:22,0:22:63.20:0,63,1758	0/0:11,0:11:33.11:0,33,989
chr10	89083381	.	T	TTGA	1928.49	PASS	AB=0.761;AC=2;AF=0.036;AN=56;BaseQRankSum=9.539;DP=706;FS=16.799;HRun=0;HaplotypeScore=114.6192;InbreedingCoeff=-0.0382;MQ=83.44;MQ0=0;MQRankSum=-9.653;QD=18.91;ReadPosRankSum=-0.280;VQSLOD=1.9840;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:50,19:69:99:1273,0,2063	0/0:4,0:4:12.04:0,12,212	0/0:19,0:19:53.55:0,54,907	0/0:25,0:25:72.23:0,72,1169	0/0:22,0:22:66.23:0,66,1164	0/0:27,0:27:81.28:0,81,1429	0/0:20,0:20:60.15:0,60,984	0/0:28,0:28:84.27:0,84,1431	0/1:21,11:32:99:744,0,854	0/0:27,0:27:81.27:0,81,1397	0/0:14,0:14:39.13:0,39,680	0/0:23,0:23:66.23:0,66,1164	0/0:20,0:20:57.20:0,57,999	0/0:19,0:19:51.17:0,51,900	0/0:37,0:36:99:0,105,1853	0/0:22,0:22:66.22:0,66,1138	0/0:39,0:39:99:0,117,2047	0/0:27,0:27:78.25:0,78,1348	0/0:26,0:26:72.22:0,72,1214	0/0:26,0:26:75.26:0,75,1323	0/0:30,0:30:90.31:0,90,1588	0/0:10,0:10:27.08:0,27,449	0/0:13,0:13:39.13:0,39,681	0/0:24,0:24:72.25:0,72,1271	0/0:26,0:26:69.20:0,69,1171	0/0:22,0:22:63.21:0,63,1077	0/0:29,0:29:84.29:0,84,1482	0/0:25,0:25:75.26:0,75,1323
chr10	89083434	.	AT	A	462.85	PASS	AB=0.748;AC=2;AF=0.036;AN=56;BaseQRankSum=9.562;DP=735;FS=0.000;HRun=7;HaplotypeScore=107.8846;InbreedingCoeff=-0.0386;MQ=83.05;MQ0=0;MQRankSum=-7.170;QD=4.54;ReadPosRankSum=-0.261;VQSLOD=-0.1020;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:55,19:74:99:260,0,1700	0/0:5,0:5:15.05:0,15,188	0/0:26,1:27:13.32:0,13,483	0/0:34,0:32:35:0,35,618	0/0:21,0:21:60.17:0,60,728	0/0:27,0:27:75.22:0,75,929	0/0:23,0:23:66.21:0,66,830	0/0:21,0:21:51.02:0,51,608	0/1:16,12:28:99:292,0,415	0/0:32,0:32:87.28:0,87,1094	0/0:16,0:16:48.15:0,48,601	0/0:22,0:22:63.20:0,63,792	0/0:15,0:15:45.14:0,45,565	0/0:22,0:22:66.18:0,66,803	0/0:34,0:34:99:0,102,1264	0/0:18,1:19:23.59:0,24,585	0/0:36,0:36:99:0,105,1306	0/0:30,0:30:80.58:0,81,1029	0/0:23,0:23:63.20:0,63,785	0/0:27,0:27:75.20:0,75,926	0/0:17,0:17:48.15:0,48,603	0/0:28,1:29:53.64:0,54,972	0/0:12,0:12:36.10:0,36,440	0/0:35,0:35:96.30:0,96,1196	0/0:22,0:22:60.14:0,60,721	0/0:28,0:28:78.25:0,78,980	0/0:28,0:28:81.26:0,81,1017	0/0:28,0:28:66.21:0,66,830
chr10	89083504	.	GA	G	1082.92	PASS	AB=0.703;AC=2;AF=0.036;AN=56;BaseQRankSum=9.726;DP=724;FS=20.529;HRun=1;HaplotypeScore=91.3944;InbreedingCoeff=-0.0371;MQ=63.81;MQ0=3;MQRankSum=-8.924;QD=10.62;ReadPosRankSum=-0.200;VQSLOD=0.2683;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:48,18:65:99:401,0,2070	0/0:9,0:9:27.06:0,27,404	0/0:20,0:11:27.19:0,27,417	0/0:17,0:13:30.07:0,30,416	0/0:22,0:22:57.18:0,57,883	0/0:29,0:29:87.30:0,87,1384	0/0:31,0:31:93.30:0,93,1460	0/0:39,0:38:99:0,114,1752	0/1:14,22:36:99:771,0,490	0/0:30,0:30:90.31:0,90,1430	0/0:21,0:21:57.19:0,57,898	0/0:23,0:23:69.22:0,69,1074	0/0:26,0:26:78.21:0,78,1175	0/0:19,0:19:57.19:0,57,911	0/0:41,0:41:99:0,123,1941	0/0:18,0:18:54.15:0,54,816	0/0:26,0:26:78.24:0,78,1221	0/0:23,0:23:66.22:0,66,1050	0/0:18,0:18:48.15:0,48,743	0/0:17,0:17:48.16:0,48,767	0/0:32,0:32:96.31:0,96,1511	0/0:26,0:26:78.27:0,78,1247	0/0:15,0:15:45.15:0,45,719	0/0:31,0:31:90.31:0,90,1431	0/0:19,0:19:51.13:0,51,762	0/0:32,0:32:96.33:0,96,1534	0/0:21,0:21:63.16:0,63,974	0/0:17,0:17:48.16:0,48,767
chr10	89083899	.	GAA	G	3387.51	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.475;DP=641;FS=20.162;HRun=11;HaplotypeScore=90.6943;InbreedingCoeff=0.9474;MQ=64.57;MQ0=4;MQRankSum=-0.217;QD=23.36;ReadPosRankSum=4.726;VQSLOD=1.5262;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,70:76:99:1819,171,0	0/0:1,0:9:19.96:0,20,68	0/0:11,0:7:21.05:0,21,271	0/0:15,0:11:26.54:0,27,293	0/0:20,0:21:53.66:0,54,766	0/0:20,0:20:54.13:0,54,765	0/0:25,0:23:54.03:0,54,907	1/1:5,15:20:46.90:483,47,0	1/1:7,40:47:99:1085,102,0	0/0:6,0:23:45.65:0,46,199	0/0:1,1:19:5.04:0,5,81	0/0:19,0:19:39.57:0,40,565	0/0:20,0:21:53.59:0,54,723	0/0:15,0:17:41.56:0,42,523	0/0:23,0:23:65.97:0,66,948	0/0:14,0:14:39.05:0,39,524	0/0:3,1:30:65.85:0,66,250	0/0:31,0:32:81.19:0,81,1175	0/0:17,0:17:33.08:0,33,475	0/0:22,0:25:59.69:0,60,865	0/0:13,0:13:35.98:0,36,492	0/0:17,0:19:50.61:0,51,694	0/0:16,0:16:48.16:0,48,739	0/0:31,0:31:90.24:0,90,1315	0/0:23,0:24:65.15:0,65,894	0/0:25,0:27:74.73:0,75,1083	0/0:17,0:17:48.16:0,48,734	0/0:5,0:6:14.51:0,15,161
chr10	89084342	.	AC	A	528.07	PASS	AB=0.774;AC=2;AF=0.036;AN=56;BaseQRankSum=7.508;DP=478;FS=4.470;HRun=2;HaplotypeScore=56.1414;InbreedingCoeff=-0.0381;MQ=88.75;MQ0=0;MQRankSum=-6.660;QD=7.54;ReadPosRankSum=0.495;VQSLOD=0.9476;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:30,20:50:99:557,0,1126	0/0:5,0:5:15.05:0,15,225	0/0:26,0:26:75.16:0,75,976	0/0:16,0:16:39.12:0,39,527	0/0:15,0:15:36.12:0,36,540	0/0:9,0:8:24.08:0,24,360	0/0:24,0:24:72.23:0,72,1059	0/0:16,0:16:48.15:0,48,699	0/1:16,4:20:59.47:59,0,660	0/0:18,0:18:54.18:0,54,807	0/0:9,0:9:24.08:0,24,359	0/0:22,0:22:66.21:0,66,969	0/0:9,0:9:21.07:0,21,315	0/0:18,0:18:51.14:0,51,713	0/0:14,0:13:42.14:0,42,630	0/0:12,0:12:36.12:0,36,538	0/0:24,0:24:66.21:0,66,969	0/0:15,0:15:45.15:0,45,673	0/0:22,0:22:63.21:0,63,943	0/0:9,0:9:27.08:0,27,383	0/0:21,0:21:57.19:0,57,854	0/0:13,0:13:39.13:0,39,585	0/0:8,0:8:24.08:0,24,360	0/0:25,0:24:69.23:0,69,1027	0/0:20,0:20:60.20:0,60,887	0/0:17,0:17:51.17:0,51,765	0/0:10,0:10:27.09:0,27,405	0/0:11,0:11:33.11:0,33,493
chr10	89084448	.	G	GT	38.20	PASS	AC=2;AF=0.050;AN=40;BaseQRankSum=3.233;DP=108;FS=9.389;HRun=1;HaplotypeScore=23.1003;InbreedingCoeff=0.2942;MQ=38.38;MQ0=24;MQRankSum=-1.421;QD=6.37;ReadPosRankSum=0.141;VQSLOD=-0.2853;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,4:5:7.40:117,7,0	0/0:4,0:1:0:0,0,0	./.	./.	./.	0/0:7,0:6:15.05:0,15,210	0/0:8,0:8:18.62:0,19,183	0/0:1,0:1:3.01:0,3,42	./.	./.	./.	0/0:2,0:2:3.88:0,4,26	0/0:9,0:8:19.54:0,20,211	0/0:7,0:5:7.38:0,7,79	0/0:4,0:3:9.03:0,9,125	0/0:2,0:2:6.02:0,6,84	0/0:3,0:1:3.01:0,3,42	0/0:5,0:5:15.05:0,15,200	0/0:3,0:2:6.02:0,6,83	./.	0/0:14,0:8:15.03:0,15,189	0/0:4,0:4:3.48:0,3,42	0/0:1,0:1:3.01:0,3,42	0/0:3,0:3:5.73:0,6,61	0/0:4,0:2:1.55:0,2,5	0/0:4,0:3:9.02:0,9,109	0/0:3,0:1:3.01:0,3,41	./.
chr10	89084459	.	TG	T	737.62	PASS	AB=0.861;AC=19;AF=0.396;AN=48;BaseQRankSum=1.215;DP=174;FS=0.964;HRun=2;HaplotypeScore=27.3339;InbreedingCoeff=0.2183;MQ=47.61;MQ0=24;MQRankSum=1.657;QD=7.38;ReadPosRankSum=0.721;VQSLOD=0.8528;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,3:10:13.21:133,13,0	0/1:3,0:1:0:0,0,0	0/0:14,0:2:1.34:0,1,13	0/1:21,0:4:9.64:12,0,10	./.	0/1:5,3:8:33.79:102,0,34	0/1:8,4:12:58.06:63,0,58	0/0:1,0:1:0.89:0,1,2	1/1:1,0:1:2.80:13,3,0	./.	./.	0/1:4,0:4:19.76:20,0,30	0/0:7,0:6:7.84:0,8,71	1/1:5,3:7:10.91:142,11,0	0/0:5,0:4:10.76:0,11,83	0/0:3,0:3:6.90:0,7,70	0/0:3,0:1:3.01:0,3,36	1/1:2,4:6:12.04:153,12,0	0/1:5,4:8:21.93:102,0,22	./.	0/0:20,0:16:24.30:0,24,238	0/1:5,1:6:4.52:31,0,5	0/0:2,0:2:6.02:0,6,68	0/0:4,0:4:6.01:0,6,68	1/1:6,1:5:3.59:39,4,0	0/0:7,0:6:8.94:0,9,102	1/1:0,3:3:6.02:76,6,0	0/0:3,0:1:3.01:0,3,34
chr10	89085006	.	C	CCTAT	5309.10	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.103;DP=525;FS=4.385;HRun=0;HaplotypeScore=94.9211;InbreedingCoeff=0.8916;MQ=80.91;MQ0=0;MQRankSum=-7.534;QD=57.09;ReadPosRankSum=-1.894;VQSLOD=5.8954;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,35:53:99:2769,108,0	0/0:7,0:7:18.06:0,18,341	0/0:15,0:15:29.94:0,30,439	0/0:22,0:22:60.14:0,60,1053	0/0:6,0:6:18.06:0,18,334	0/0:18,0:18:48.16:0,48,911	0/0:28,0:28:72.25:0,72,1355	1/1:4,10:14:36.12:852,36,0	1/1:5,21:26:63.22:1687,63,0	0/0:17,0:17:51.17:0,51,937	0/0:4,0:4:12.04:0,12,228	0/0:24,0:24:69.21:0,69,1247	0/0:12,0:12:36.11:0,36,652	0/0:18,0:18:54.17:0,54,994	0/0:19,0:19:54.19:0,54,1025	0/0:11,0:11:30.09:0,30,540	0/0:35,0:35:96.31:0,96,1782	0/0:34,0:34:99:0,99,1811	0/0:14,0:14:39.12:0,39,691	0/0:7,0:7:21.07:0,21,388	0/0:34,0:34:99:0,99,1865	0/0:7,0:7:0.08:0,0,321	0/0:6,0:6:15.05:0,15,284	0/0:35,0:35:99:0,105,1916	0/0:8,0:8:21.07:0,21,399	0/0:19,0:19:51.16:0,51,936	0/0:20,0:20:57.20:0,57,1082	0/0:12,0:12:36.12:0,36,683
chr10	89086115	.	A	AACACAC	2813.36	PASS	AB=1.000;AC=37;AF=0.712;AN=52;BaseQRankSum=2.380;DP=460;FS=0.000;HRun=0;HaplotypeScore=133.2148;InbreedingCoeff=0.5130;MQ=77.92;MQ0=6;MQRankSum=-4.988;QD=9.70;ReadPosRankSum=-1.670;VQSLOD=1.7219;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:22:15.02:283,15,0	1/1:6,6:12:3.89:99,4,0	./.	./.	1/1:11,0:11:2.57:74,3,0	1/1:13,0:20:5.69:155,6,0	1/1:15,3:16:3.01:90,3,0	0/1:23,0:20:0:0,0,0	1/1:6,0:12:3.01:39,3,0	1/1:12,2:16:11.94:230,12,0	1/1:6,0:12:2.95:40,3,0	1/1:14,0:14:5.94:154,6,0	0/0:7,0:10:8.91:0,9,124	1/1:17,0:17:8.89:235,9,0	0/0:17,0:18:39.11:0,39,699	0/1:9,0:10:9.75:10,0,173	1/1:10,0:16:4.41:125,4,0	1/1:13,0:13:19.31:421,19,0	1/1:13,0:12:12.44:145,12,0	1/1:6,0:6:3.01:71,3,0	0/0:22,0:24:14.73:0,15,258	1/1:4,1:9:8.90:255,9,0	0/0:12,0:12:8.95:0,9,102	0/0:23,0:26:30.10:0,30,528	1/1:8,0:14:12.04:313,12,0	0/1:9,0:15:10.26:10,0,176	1/1:12,1:16:9.39:232,9,0	0/0:5,0:6:9.03:0,9,163
chr10	89087206	.	TATACAC	T	967.76	PASS	AB=0.760;AC=4;AF=0.071;AN=56;BaseQRankSum=4.860;DP=806;FS=0.000;HRun=0;HaplotypeScore=185.7770;InbreedingCoeff=0.5431;MQ=67.14;MQ0=4;MQRankSum=-6.929;QD=8.88;ReadPosRankSum=1.060;VQSLOD=2.7308;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:4,47:51:8.20:278,0,8	0/0:10,0:10:24.49:0,24,120	0/0:22,0:18:54.04:0,54,553	0/0:30,0:23:65.74:0,66,809	0/0:14,0:14:36.07:0,36,1006	0/0:23,0:23:66.13:0,66,1753	0/0:36,0:36:96.21:0,96,2582	0/0:39,0:39:67.30:0,67,1220	1/1:2,23:26:33.11:795,33,0	0/1:32,0:32:5.90:6,0,298	0/0:20,0:20:36.21:0,36,150	0/0:38,0:38:99:0,105,2860	0/0:36,0:36:99:0,102,2594	0/0:35,0:35:99:0,105,2982	0/0:42,0:39:99:0,108,2836	0/0:30,0:30:87.17:0,87,1997	0/0:32,0:32:63.02:0,63,339	0/0:29,0:29:75.17:0,75,2054	0/0:19,0:16:47.25:0,47,556	0/0:20,0:20:60.13:0,60,1571	0/0:50,0:49:99:0,132,3572	0/0:31,0:31:84.21:0,84,2294	0/0:18,0:18:54.16:0,54,1533	0/0:34,0:34:87.19:0,87,2182	0/0:30,0:30:61.19:0,61,1910	0/0:25,0:25:74.87:0,75,1791	0/0:25,0:25:47.79:0,48,584	0/0:9,0:9:26.99:0,27,473
chr10	89087208	.	TACAC	T	3527.65	PASS	AB=0.838;AC=13;AF=0.241;AN=54;BaseQRankSum=9.474;DP=812;FS=5.479;HRun=0;HaplotypeScore=148.7264;InbreedingCoeff=0.6861;MQ=66.29;MQ0=5;MQRankSum=-0.002;QD=15.21;ReadPosRankSum=1.132;VQSLOD=2.6808;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:51,0:51:8.99:103,0,9	1/1:2,8:10:21.07:342,21,0	./.	0/0:32,0:22:8.61:0,9,110	0/0:12,0:12:27.08:0,27,603	0/0:22,0:23:47.89:0,48,1038	0/0:35,0:37:74.86:0,75,1644	0/1:26,3:41:43.31:43,0,229	1/1:25,0:25:33.04:316,33,0	1/1:6,25:33:77.88:1136,78,0	1/1:3,17:20:42.61:684,43,0	0/0:35,0:38:84.01:0,84,1841	0/0:33,0:36:68.97:0,69,1564	0/0:38,0:38:99:0,99,2186	0/0:38,0:36:72.25:0,72,1724	0/0:27,0:30:56.64:0,57,1178	1/1:10,22:32:54.18:877,54,0	0/0:24,0:27:62.91:0,63,1324	0/1:14,0:17:26.14:26,0,79	0/0:20,0:20:45.14:0,45,1024	0/0:48,0:50:99:0,111,2361	0/0:29,0:31:62.94:0,63,1370	0/0:18,0:18:48.12:0,48,967	0/0:30,0:34:64.48:0,64,1373	0/0:30,0:31:57.40:0,57,1243	0/0:26,0:27:16.40:0,16,1226	0/0:8,0:23:21.78:0,22,99	0/0:9,0:9:9.03:0,9,218
chr10	89087257	.	G	GCA	1427.08	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.379;DP=896;FS=11.640;HRun=0;HaplotypeScore=147.3607;InbreedingCoeff=0.9994;MQ=58.89;MQ0=13;MQRankSum=0.478;QD=37.55;ReadPosRankSum=-3.441;VQSLOD=3.5362;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:42.05:0,42,505	0/0:13,0:13:36.12:0,36,467	0/0:45,0:22:59.47:0,59,689	0/0:49,0:24:60.15:0,60,746	0/0:25,0:25:72.22:0,72,922	0/0:30,0:30:72.49:0,72,1027	0/0:36,0:36:69.20:0,69,880	1/1:8,30:38:93.27:1522,93,0	0/0:32,0:32:72.22:0,72,918	0/0:29,0:29:78.25:0,78,1015	0/0:34,0:34:87.25:0,87,1100	0/0:35,0:35:96.30:0,96,1230	0/0:29,0:29:54.17:0,54,702	0/0:34,0:34:84.26:0,84,1092	0/0:31,0:31:72.18:0,72,936	0/0:38,0:38:99:0,102,1327	0/0:33,0:33:81.07:0,81,1036	0/0:29,0:29:72.18:0,72,902	0/0:20,0:19:47.86:0,48,569	0/0:28,0:28:66.09:0,66,817	0/0:67,0:67:99:0,162,2078	0/0:36,0:36:96.30:0,96,1231	0/0:17,0:17:39.11:0,39,486	0/0:42,0:42:90.25:0,90,1151	0/0:28,0:28:66.21:0,66,857	0/0:30,0:30:72.22:0,72,921	0/0:18,0:18:36.12:0,36,467	0/0:12,0:12:33.11:0,33,429
chr10	89088028	.	A	ACT	2894.55	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.955;DP=600;FS=2.419;HRun=0;HaplotypeScore=95.1489;InbreedingCoeff=0.9925;MQ=89.72;MQ0=0;MQRankSum=-4.591;QD=41.95;ReadPosRankSum=1.086;VQSLOD=5.4664;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,41:49:99:2102,117,0	0/0:6,0:6:18.06:0,18,252	0/0:24,0:24:57.18:0,57,776	0/0:22,0:22:57.16:0,57,757	0/0:22,0:22:63.21:0,63,881	0/0:21,0:21:57.17:0,57,780	0/0:26,0:26:72.24:0,72,1007	0/0:21,0:21:60.19:0,60,825	1/1:1,19:20:51.17:914,51,0	0/0:30,0:30:75.25:0,75,1050	0/0:13,0:13:39.13:0,39,544	0/0:23,0:23:66.22:0,66,924	0/0:21,0:21:60.20:0,60,839	0/0:21,0:21:57.19:0,57,795	0/0:18,0:18:45.14:0,45,613	0/0:16,0:16:48.15:0,48,654	0/0:48,0:48:99:0,129,1730	0/0:23,0:22:69.23:0,69,963	0/0:22,0:22:63.18:0,63,860	0/0:15,0:15:45.15:0,45,630	0/0:40,0:40:99:0,111,1501	0/0:12,0:12:36.12:0,36,504	0/0:14,0:14:39.13:0,39,546	0/0:26,0:26:72.24:0,72,1008	0/0:8,0:8:24.08:0,24,336	0/0:12,0:12:33.11:0,33,462	0/0:19,0:19:57.17:0,57,776	0/0:8,0:8:21.05:0,21,275
chr10	89090033	.	CAG	C	6778.71	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=17.441;DP=729;FS=3.786;HRun=0;HaplotypeScore=100.1622;InbreedingCoeff=0.9929;MQ=89.13;MQ0=0;MQRankSum=-5.094;QD=35.49;ReadPosRankSum=0.919;VQSLOD=7.0887;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,41:43:99:1417,99,0	1/1:0,5:5:15.01:192,15,0	0/0:28,0:28:75.23:0,75,1284	0/0:25,0:25:60.16:0,60,1062	0/0:21,0:21:60.19:0,60,1064	0/0:28,0:28:81.21:0,81,1346	0/0:36,0:36:99:0,102,1782	1/1:3,33:36:93.24:1238,93,0	1/1:1,21:22:54.18:773,54,0	1/1:2,33:35:99:1363,99,0	1/1:0,15:15:39.13:550,39,0	0/0:42,0:42:99:0,120,2122	0/0:35,0:35:99:0,105,1869	0/0:30,0:30:90.31:0,90,1642	0/0:26,0:26:75.24:0,75,1344	0/0:23,0:23:69.24:0,69,1262	1/1:1,34:35:87.29:1246,87,0	0/0:27,0:27:78.22:0,78,1379	0/0:17,0:17:45.12:0,45,761	0/0:18,0:18:48.16:0,48,866	0/0:35,0:35:99:0,105,1893	0/0:15,0:15:42.14:0,42,763	0/0:22,0:22:63.22:0,63,1153	0/0:39,0:39:99:0,111,1956	0/0:21,0:21:60.19:0,60,1070	0/0:18,1:19:14.21:0,14,947	0/0:24,0:23:72.25:0,72,1308	0/0:7,0:7:21.07:0,21,385
chr10	89092453	.	T	TAGACAGACAGAC	10251.26	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=1.120;DP=753;FS=3.159;HRun=0;HaplotypeScore=238.3108;InbreedingCoeff=0.9449;MQ=63.16;MQ0=7;MQRankSum=-11.237;QD=34.17;ReadPosRankSum=-4.343;VQSLOD=3.4264;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:45:33.11:858,33,0	1/1:6,5:15:15.05:877,15,0	0/0:45,0:27:18.11:0,18,594	0/0:38,0:25:23.97:0,24,487	0/0:16,0:16:33.09:0,33,801	0/0:23,0:23:54.19:0,54,1708	0/0:28,0:28:66.23:0,66,2181	1/1:48,0:48:60.14:1157,60,0	1/1:12,0:29:33.11:841,33,0	1/1:15,6:35:54.17:1893,54,0	1/1:21,0:21:6.02:250,6,0	0/0:18,0:18:36.12:0,36,1195	0/0:28,0:28:48.14:0,48,1433	0/0:28,0:28:60.16:0,60,1778	0/0:26,0:26:48.16:0,48,1656	0/0:24,0:25:51.14:0,51,1431	1/1:13,4:21:9.03:526,9,0	0/0:28,0:28:69.11:0,69,1928	1/1:20,7:33:41.98:1577,42,0	1/1:10,2:18:3.01:175,3,0	0/0:28,0:28:69.22:0,69,2274	0/0:20,0:20:42.14:0,42,1380	0/0:27,0:27:57.15:0,57,1712	0/0:17,0:17:42.12:0,42,1375	0/0:18,0:18:42.13:0,42,1317	0/0:29,0:28:54.16:0,54,1642	1/1:16,12:34:39.02:2097,39,0	0/0:11,0:11:27.06:0,27,740
chr10	89094355	.	A	AGCAGGC	12232.99	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-4.027;DP=700;FS=1.608;HRun=0;HaplotypeScore=143.8542;InbreedingCoeff=0.9837;MQ=84.44;MQ0=0;MQRankSum=-16.114;QD=68.72;ReadPosRankSum=-1.261;VQSLOD=5.2939;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,26:35:60.21:2080,60,0	1/1:3,4:12:9.03:323,9,0	0/0:25,0:25:75.23:0,75,1635	0/0:24,0:24:69.19:0,69,1443	0/0:29,0:29:87.30:0,87,2003	0/0:17,0:17:51.16:0,51,1178	0/0:30,0:30:90.29:0,90,2051	1/1:18,9:30:81.28:2331,81,0	1/1:4,21:26:75.20:2428,75,0	1/1:11,15:30:78.22:2406,78,0	1/1:2,12:16:30.10:945,30,0	0/0:22,0:22:66.23:0,66,1564	0/0:28,0:28:81.25:0,81,1846	0/0:31,0:31:87.27:0,87,1958	0/0:27,0:26:81.28:0,81,1926	0/0:32,0:32:90.28:0,90,2049	1/1:1,24:29:48.16:1720,48,0	0/0:26,0:26:72.17:0,72,1549	0/0:16,0:16:48.13:0,48,1011	0/0:25,0:25:75.26:0,75,1802	0/0:44,0:44:99:0,123,2710	0/0:19,0:19:57.20:0,57,1325	0/0:20,0:20:60.19:0,60,1248	0/0:35,0:35:99:0,105,2388	0/0:12,0:12:36.12:0,36,863	0/0:31,0:31:87.27:0,87,1958	0/0:25,0:25:75.26:0,75,1778	0/0:4,0:4:12.04:0,12,266
chr10	89095221	.	C	CTG	1770.91	PASS	AB=0.795;AC=25;AF=0.481;AN=52;BaseQRankSum=-0.456;DP=845;FS=0.000;HRun=0;HaplotypeScore=145.2209;InbreedingCoeff=0.3072;MQ=63.16;MQ0=14;MQRankSum=-1.336;QD=4.46;ReadPosRankSum=-1.472;VQSLOD=2.7660;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:8.31:0,8,78	1/1:4,0:8:2.73:26,3,0	./.	./.	0/1:21,4:24:74.10:230,0,74	0/1:17,9:27:58.98:157,0,59	1/1:26,0:27:9.92:277,10,0	0/0:33,0:31:5.98:0,6,48	0/0:37,0:36:11.76:0,12,91	1/1:34,0:33:18.83:180,19,0	1/1:17,0:17:5.85:66,6,0	0/1:20,9:30:73.23:130,0,73	0/0:19,0:19:15.21:0,15,120	1/1:15,10:27:5.53:89,6,0	0/0:29,0:29:44.84:0,45,405	0/0:32,0:33:41.27:0,41,474	1/1:28,3:44:14.32:153,14,0	0/1:10,7:18:41.38:120,0,41	1/1:21,0:21:3.01:43,3,0	0/1:15,8:24:33.89:40,0,34	0/0:77,1:80:66.74:0,67,549	1/1:18,7:26:6.02:90,6,0	0/0:28,0:28:27.54:0,28,294	0/0:52,0:52:44.24:0,44,553	0/1:15,7:22:50.52:120,0,51	0/1:24,0:25:6.68:7,0,172	1/1:20,1:21:12.70:223,13,0	0/0:12,0:12:5.85:0,6,47
chr10	89096053	.	C	CAA	2086.68	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.143;DP=584;FS=6.505;HRun=8;HaplotypeScore=71.0793;InbreedingCoeff=0.9955;MQ=88.38;MQ0=0;MQRankSum=-3.659;QD=35.37;ReadPosRankSum=1.159;VQSLOD=3.4875;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,39:44:99:1732,111,0	0/0:10,0:10:27.05:0,27,301	0/0:17,0:16:28.99:0,29,287	0/0:26,0:26:45.41:0,45,403	0/0:20,0:20:60.14:0,60,659	0/0:18,0:18:51.14:0,51,569	0/0:28,0:29:74.90:0,75,803	0/0:23,0:23:48.11:0,48,535	1/1:3,12:15:30.10:476,30,0	0/0:19,0:19:54.13:0,54,593	0/0:22,0:23:57.22:0,57,684	0/0:25,0:25:60.14:0,60,669	0/0:18,0:18:42.10:0,42,468	0/0:21,0:21:51.11:0,51,559	0/0:27,0:27:75.20:0,75,836	0/0:17,0:17:45.11:0,45,502	0/0:38,0:38:99:0,99,1104	0/0:19,0:19:51.13:0,51,569	0/0:19,0:20:50.86:0,51,539	0/0:21,0:21:54.11:0,54,591	0/0:29,0:29:66.15:0,66,726	0/0:11,0:11:21.06:0,21,234	0/0:16,0:17:44.82:0,45,461	0/0:10,0:10:27.06:0,27,301	0/0:16,0:16:45.11:0,45,502	0/0:25,0:25:63.14:0,63,702	0/0:15,0:15:33.06:0,33,368	0/0:10,0:10:27.07:0,27,301
chr10	89096633	.	GCACACA	G	1321.85	PASS	AB=0.935;AC=16;AF=0.308;AN=52;BaseQRankSum=6.813;DP=648;FS=1.782;HRun=0;HaplotypeScore=139.0348;InbreedingCoeff=0.6574;MQ=69.55;MQ0=10;MQRankSum=-7.186;QD=8.06;ReadPosRankSum=-0.577;VQSLOD=2.3787;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:22:2.68:0,3,11	1/1:6,4:10:12.04:243,12,0	./.	./.	0/0:18,0:19:18.04:0,18,326	0/0:22,0:22:30.10:0,30,827	0/0:27,0:31:51.64:0,52,1312	0/0:24,0:24:2.04:0,2,6	1/1:12,0:20:24.06:305,24,0	1/1:17,3:20:3:61,3,0	0/1:15,1:16:14.80:112,0,15	0/0:22,0:23:51.16:0,51,1190	0/0:20,0:24:27.07:0,27,581	0/0:20,0:24:32.26:0,32,808	0/0:25,0:28:42.13:0,42,987	0/0:25,0:25:48.15:0,48,1390	1/1:20,4:24:3.01:61,3,0	0/0:24,0:24:39.07:0,39,904	1/1:12,5:18:12.93:245,13,0	1/1:9,3:11:3.01:61,3,0	0/0:44,0:47:63.14:0,63,1344	0/0:18,0:18:27.09:0,27,716	0/0:15,0:16:27.09:0,27,595	0/0:29,0:32:44.29:0,44,1159	0/0:15,0:22:27.09:0,27,648	0/1:24,2:26:81.27:81,0,770	1/1:12,5:18:18.53:326,19,0	0/0:10,0:10:21.54:0,22,656
chr10	89097795	.	AAAAAG	A	2135.59	PASS	AB=0.987;AC=18;AF=0.321;AN=56;BaseQRankSum=13.841;DP=605;FS=2.171;HRun=0;HaplotypeScore=129.4167;InbreedingCoeff=-0.2700;MQ=66.72;MQ0=7;MQRankSum=1.236;QD=5.66;ReadPosRankSum=2.277;VQSLOD=2.6833;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:26:99:137,0,119	0/0:8,0:8:5.02:0,5,24	0/0:16,0:9:10.07:0,10,145	0/0:24,0:13:17.60:0,18,319	0/1:22,1:23:99:184,0,180	0/1:18,0:15:32.75:33,0,138	0/1:24,0:23:98.40:98,0,181	1/1:6,25:28:60.95:833,61,0	0/1:20,0:20:56.32:56,0,242	0/1:32,0:32:66.05:74,0,66	0/1:21,0:21:26.57:27,0,48	0/1:11,0:11:59.67:60,0,103	0/0:13,0:13:36.11:0,36,772	0/1:20,0:19:26.90:27,0,199	0/0:31,0:31:90.29:0,90,2113	0/0:35,0:35:96.31:0,96,2438	0/1:33,0:32:0.08:2,0,0	0/1:18,2:20:48.97:282,0,49	0/1:19,0:17:97.69:98,0,153	0/1:11,1:11:99:109,0,102	0/0:14,0:14:42.14:0,42,921	0/1:16,0:15:59.67:60,0,162	0/0:21,0:21:57.17:0,57,1227	0/0:29,0:29:87.27:0,87,2120	0/1:28,0:26:99:115,0,149	0/0:24,0:24:62.67:0,63,1246	0/1:21,0:19:99:104,0,148	0/0:13,0:13:39.12:0,39,978
chr10	89097796	.	AAAAG	A	6392.69	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=11.847;DP=601;FS=4.461;HRun=0;HaplotypeScore=105.0789;InbreedingCoeff=0.8933;MQ=65.94;MQ0=7;MQRankSum=0.917;QD=15.71;ReadPosRankSum=-0.555;VQSLOD=3.9793;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,19:24:40.38:627,40,0	1/1:8,0:8:8.35:43,8,0	0/0:17,0:9:3.01:0,3,36	0/1:25,0:13:4.55:5,0,148	1/1:8,15:23:45.02:603,45,0	1/1:7,11:15:12.04:192,12,0	1/1:9,15:23:30.10:480,30,0	1/1:31,0:28:38.99:352,39,0	1/1:10,10:20:21.07:336,21,0	1/1:31,1:32:55.71:363,56,0	1/1:20,1:21:37.45:230,37,0	1/1:4,7:11:18.06:288,18,0	0/0:13,0:13:21.07:0,21,473	1/1:9,11:19:14.88:206,15,0	0/0:31,0:31:66.21:0,66,1499	0/0:34,0:34:75.26:0,75,1788	1/1:33,0:32:42.65:216,43,0	1/1:12,7:19:44.90:553,45,0	1/1:9,10:17:29.94:420,30,0	1/1:5,7:11:21:265,21,0	0/0:14,0:14:30.09:0,30,627	1/1:5,11:15:21.02:289,21,0	0/0:21,0:21:42.12:0,42,880	0/0:29,0:29:69.22:0,69,1561	1/1:6,22:26:33.11:528,33,0	0/0:22,0:22:45.14:0,45,905	1/1:9,12:20:26.61:397,27,0	0/0:13,0:13:30.10:0,30,706
chr10	89097797	.	AAAG	A	5033.71	PASS	AB=0.982;AC=23;AF=0.411;AN=56;BaseQRankSum=13.867;DP=596;FS=4.022;HRun=0;HaplotypeScore=95.5470;InbreedingCoeff=0.0307;MQ=64.27;MQ0=8;MQRankSum=1.187;QD=13.39;ReadPosRankSum=4.711;VQSLOD=4.4041;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:24:44.80:253,0,45	1/1:1,7:8:16.86:206,17,0	0/0:16,0:7:14.70:0,15,123	0/0:28,0:13:30.27:0,30,282	0/1:23,0:23:99:243,0,113	0/1:18,0:15:66.58:67,0,96	0/1:23,0:22:99:183,0,121	1/1:30,0:27:10.73:272,11,0	0/1:19,1:20:99:119,0,152	1/1:3,28:31:77.81:978,78,0	1/1:3,17:20:26.42:611,26,0	0/1:11,0:11:68.57:110,0,69	0/0:13,0:13:36.06:0,36,552	0/1:18,1:18:99:104,0,136	0/0:31,0:31:93.16:0,93,1521	0/0:33,0:33:96.21:0,96,1719	1/1:0,31:31:45.15:694,45,0	0/1:19,1:20:20.84:344,0,21	0/1:19,0:17:96.92:207,0,97	0/1:12,0:11:65.58:128,0,66	0/0:14,0:14:42.09:0,42,661	0/1:16,0:15:99:105,0,106	0/0:21,0:21:57.10:0,57,908	0/0:29,0:29:87.20:0,87,1523	0/1:28,0:26:96.89:206,0,97	0/0:22,0:22:34.29:0,34,917	0/1:19,2:19:99:202,0,101	0/0:13,0:13:36.08:0,36,668
chr10	89098748	.	T	TC	692.91	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=4.432;DP=206;FS=3.224;HRun=6;HaplotypeScore=28.5982;InbreedingCoeff=0.8199;MQ=92.51;MQ0=0;MQRankSum=-0.326;QD=23.89;ReadPosRankSum=0.203;VQSLOD=2.0893;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:24.05:0,24,245	1/1:0,1:1:3.01:38,3,0	0/0:7,0:7:15.03:0,15,153	0/0:17,0:17:42.36:0,42,409	0/0:2,0:2:6.01:0,6,61	0/0:7,0:7:18.04:0,18,184	0/0:15,0:15:36.07:0,36,367	1/1:4,0:4:8.56:44,9,0	0/0:3,0:3:3:0,3,31	1/1:0,7:7:21.07:262,21,0	1/1:0,3:3:9.03:113,9,0	0/0:9,0:9:23.97:0,24,231	0/0:4,0:4:12.03:0,12,122	0/0:12,0:12:30.07:0,30,306	0/0:5,0:5:15.03:0,15,153	0/0:3,0:3:9.02:0,9,92	1/1:2,11:14:32.97:392,33,0	0/0:9,0:9:27.06:0,27,275	0/0:9,0:9:21.04:0,21,213	0/0:6,0:6:18.04:0,18,183	0/0:12,0:12:27.06:0,27,275	0/0:7,0:7:21.05:0,21,214	0/0:10,0:10:30.07:0,30,306	0/0:5,0:5:12.03:0,12,122	0/0:8,0:8:18.04:0,18,184	0/0:9,0:9:27.06:0,27,275	0/0:7,0:7:15.03:0,15,153	./.
chr10	89100546	.	AG	A	220.73	PASS	AB=0.756;AC=3;AF=0.058;AN=52;BaseQRankSum=5.840;DP=284;FS=2.366;HRun=4;HaplotypeScore=35.4041;InbreedingCoeff=-0.1059;MQ=55.45;MQ0=4;MQRankSum=-1.035;QD=6.90;ReadPosRankSum=-0.143;VQSLOD=-0.2564;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/1:3,1:3:26.92:27,0,75	0/0:8,0:2:3.01:0,3,42	0/0:8,0:4:1.78:0,2,34	0/0:7,0:6:15.05:0,15,209	0/0:6,0:6:18.06:0,18,251	0/0:22,0:22:66.20:0,66,905	0/0:7,0:6:18.04:0,18,221	./.	0/1:6,2:7:50.91:51,0,153	0/0:3,2:5:3.01:0,3,42	0/0:15,0:15:42.12:0,42,570	0/0:10,0:9:27.09:0,27,378	0/0:8,0:8:20.65:0,21,293	0/0:8,0:8:24.08:0,24,335	0/0:8,0:8:21.07:0,21,293	0/1:10,10:20:99:240,0,325	0/0:19,0:19:51.17:0,51,714	0/0:10,0:10:24.07:0,24,320	0/0:4,0:4:12.04:0,12,167	0/0:37,0:34:90.21:0,90,1200	0/0:3,0:3:9.03:0,9,126	0/0:1,0:1:3.01:0,3,42	0/0:20,0:20:57.19:0,57,798	0/0:11,0:11:33.10:0,33,444	0/0:14,0:14:39.13:0,39,540	0/0:18,0:18:54.18:0,54,751	0/0:1,0:1:3.01:0,3,42
chr10	89100579	.	AG	A	526.19	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.427;DP=369;FS=2.040;HRun=4;HaplotypeScore=47.6750;InbreedingCoeff=0.9262;MQ=59.65;MQ0=2;MQRankSum=-4.936;QD=21.05;ReadPosRankSum=0.004;VQSLOD=2.7644;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:27.08:323,27,0	0/0:4,0:4:12.04:0,12,168	0/0:8,0:5:12.04:0,12,163	0/0:11,0:7:11.53:0,12,135	0/0:11,0:10:30.10:0,30,418	0/0:9,0:9:21.07:0,21,294	0/0:25,0:25:69.23:0,69,965	0/0:10,0:9:27.09:0,27,378	1/1:0,9:9:27.08:324,27,0	0/0:10,0:10:30.09:0,30,406	0/0:5,0:5:12.04:0,12,168	0/0:18,0:18:54.18:0,54,756	0/0:9,0:9:27.09:0,27,378	0/0:11,0:11:33.07:0,33,440	0/0:12,0:12:33.10:0,33,444	0/0:7,0:7:21.07:0,21,293	0/0:20,0:20:57.15:0,57,774	0/0:21,0:21:60.14:0,60,794	0/0:14,0:10:30.09:0,30,405	0/0:9,0:9:21.07:0,21,294	0/0:33,0:31:84.25:0,84,1141	0/0:10,0:9:27.09:0,27,377	0/0:9,0:9:24.08:0,24,335	0/0:29,0:29:84.03:0,84,1139	0/0:11,0:11:33.09:0,33,443	0/0:14,0:14:33.11:0,33,462	0/0:16,0:15:48.16:0,48,671	0/0:8,0:8:21.07:0,21,294
chr10	89100840	.	C	CA	2250.33	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.315;DP=688;FS=9.079;HRun=2;HaplotypeScore=65.0180;InbreedingCoeff=0.9977;MQ=85.73;MQ0=0;MQRankSum=-4.070;QD=35.72;ReadPosRankSum=1.465;VQSLOD=3.9230;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:75.25:1080,75,0	0/0:8,0:8:21.05:0,21,247	0/0:15,0:15:45.11:0,45,532	0/0:30,0:30:72.65:0,73,851	0/0:23,0:23:69.19:0,69,830	0/0:37,0:37:99:0,102,1211	0/0:34,0:34:99:0,102,1198	0/0:27,0:27:75.23:0,75,920	1/1:2,32:34:59.14:1292,59,0	0/0:26,0:26:75.16:0,75,899	0/0:20,0:20:54.17:0,54,665	0/0:20,0:20:57.15:0,57,691	0/0:20,0:20:57.18:0,57,705	0/0:23,0:23:66.21:0,66,817	0/0:36,0:36:99:0,102,1264	0/0:30,1:31:47.07:0,47,1022	0/0:28,0:28:81.25:0,81,1003	0/0:30,0:30:87.26:0,87,1064	0/0:19,0:19:54.15:0,54,656	0/0:16,0:16:45.11:0,45,541	0/0:40,0:40:99:0,114,1369	0/0:20,0:20:57.18:0,57,700	0/0:16,0:15:45.14:0,45,558	0/0:26,0:26:72.23:0,72,892	0/0:17,0:17:45.14:0,45,557	0/0:24,0:24:72.18:0,72,865	0/0:28,0:28:78.22:0,78,940	0/0:11,0:11:33.10:0,33,408
chr10	89101312	.	GA	G	3186.07	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.898;DP=618;FS=6.724;HRun=9;HaplotypeScore=81.3051;InbreedingCoeff=0.9973;MQ=64.06;MQ0=3;MQRankSum=-3.199;QD=19.19;ReadPosRankSum=-0.015;VQSLOD=3.8416;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:31:78.02:707,78,0	1/1:4,6:10:21.01:192,21,0	0/0:22,0:17:36.08:0,36,396	0/0:23,0:18:22.38:0,22,340	0/0:22,0:22:57.17:0,57,658	0/0:23,0:23:69.06:0,69,766	0/0:16,0:15:42.12:0,42,485	1/1:9,20:28:60:540,60,0	1/1:8,21:29:69.03:631,69,0	1/1:8,17:25:50.56:465,51,0	1/1:2,14:16:35.71:328,36,0	0/0:18,0:18:45.12:0,45,509	0/0:17,0:17:39.10:0,39,441	0/0:17,0:17:42.09:0,42,457	0/0:13,0:13:30.07:0,30,331	0/0:26,0:26:60.17:0,60,684	1/1:8,17:25:57.02:521,57,0	0/0:37,0:37:93.23:0,93,1056	0/0:20,1:20:26.70:0,27,560	0/0:26,1:27:47.75:0,48,793	0/0:19,1:20:20.58:0,21,464	0/0:26,1:27:38.72:0,39,689	0/0:18,0:18:54.15:0,54,615	0/0:21,0:21:57.17:0,57,658	0/0:19,0:19:57.17:0,57,658	0/0:29,0:29:66.19:0,66,753	0/0:27,0:26:78.20:0,78,880	0/0:9,0:9:27:0,27,266
chr10	89101329	.	G	GAAA	4656.97	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.587;DP=659;FS=1.212;HRun=8;HaplotypeScore=115.3967;InbreedingCoeff=0.9596;MQ=66.42;MQ0=3;MQRankSum=-2.574;QD=30.04;ReadPosRankSum=0.017;VQSLOD=3.3042;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:35:75.72:560,76,0	1/1:1,9:11:24.03:410,24,0	0/0:21,0:15:2.65:0,3,82	0/0:26,0:19:14.94:0,15,310	0/0:29,0:29:81.19:0,81,1013	0/0:25,0:25:61.36:0,61,838	0/0:18,0:18:51.08:0,51,633	0/0:35,0:33:84.76:0,85,1004	1/1:6,0:28:71.67:578,72,0	1/1:6,28:36:75.05:1270,75,0	1/1:3,16:21:51.16:896,51,0	0/0:19,0:19:54.17:0,54,707	0/0:16,0:16:45.14:0,45,584	0/0:20,0:20:60.19:0,60,786	0/0:11,0:11:30.07:0,30,380	0/0:21,0:21:60.14:0,60,728	1/1:6,17:23:53.21:943,53,0	0/0:34,0:34:75.13:0,75,949	0/0:22,0:21:44.98:0,45,520	0/0:31,0:31:84.20:0,84,1068	0/0:16,0:16:30.08:0,30,393	0/0:20,0:20:51.14:0,51,654	0/0:20,0:20:46.90:0,47,548	0/0:18,0:18:42.10:0,42,551	0/0:22,0:22:48.11:0,48,613	0/0:26,0:26:75.21:0,75,959	0/0:29,0:28:75:0,75,890	0/0:23,0:23:64.86:0,65,853
chr10	89101670	.	GA	G	2891.20	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=14.936;DP=633;FS=6.333;HRun=6;HaplotypeScore=72.6296;InbreedingCoeff=0.9886;MQ=65.13;MQ0=0;MQRankSum=1.466;QD=27.54;ReadPosRankSum=-0.771;VQSLOD=3.7695;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:37:99:1096,102,0	0/0:7,0:7:15.05:0,15,197	0/0:12,0:11:21.06:0,21,255	0/0:11,0:11:18.06:0,18,236	0/0:28,0:28:72.23:0,72,944	0/0:28,0:28:75.22:0,75,957	0/0:20,0:20:57.18:0,57,744	1/1:5,31:36:94.79:1003,95,0	1/1:1,31:32:87.22:935,87,0	0/0:24,0:24:63.17:0,63,809	0/0:23,0:23:63.12:0,63,782	0/0:22,0:22:57.19:0,57,749	0/0:14,0:14:42.14:0,42,553	0/0:19,0:19:57.19:0,57,749	0/0:25,0:25:69.22:0,69,906	0/0:22,0:22:57.17:0,57,735	0/0:30,0:30:90.28:0,90,1156	0/0:25,0:25:75.24:0,75,987	0/0:25,0:25:72.21:0,72,930	0/0:22,0:22:39.12:0,39,503	0/0:22,0:22:60.17:0,60,772	0/0:17,0:17:39.13:0,39,508	0/0:15,0:15:45.15:0,45,591	0/0:13,0:13:21.07:0,21,270	0/0:19,0:19:54.17:0,54,697	0/0:22,0:22:63.20:0,63,829	0/0:31,0:31:87.25:0,87,1102	0/0:32,0:32:96.30:0,96,1249
chr10	89102364	.	TAC	T	1791.68	PASS	AB=0.922;AC=15;AF=0.268;AN=56;BaseQRankSum=6.899;DP=932;FS=3.250;HRun=0;HaplotypeScore=148.5138;InbreedingCoeff=0.3548;MQ=64.87;MQ0=7;MQRankSum=-0.214;QD=4.82;ReadPosRankSum=-0.165;VQSLOD=2.8297;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:56:8.70:0,9,93	1/1:3,5:8:14.94:154,15,0	0/0:49,0:28:15.01:0,15,164	0/0:36,0:25:21.06:0,21,275	0/0:22,1:24:1.92:0,2,589	0/0:28,1:30:22.51:0,23,759	0/1:32,2:35:1.56:2,0,425	0/0:42,0:40:37.83:0,38,433	0/0:32,0:39:6.25:0,6,51	1/1:26,9:37:65.78:684,66,0	1/1:15,7:22:30.07:336,30,0	0/0:26,1:28:22.54:0,23,761	0/1:23,4:27:99:116,0,530	0/0:23,0:23:51.04:0,51,692	0/0:48,2:50:43.53:0,44,1020	0/1:43,4:48:4.69:5,0,1256	1/1:15,13:27:41.90:487,42,0	0/1:20,2:23:31.45:31,0,382	0/0:14,0:13:12.04:0,12,187	0/0:27,1:30:19.52:0,20,689	0/1:56,4:60:99:112,0,1272	0/0:41,0:42:99:0,99,1479	0/0:27,0:27:42.14:0,42,646	0/1:49,4:54:4.69:5,0,1246	0/0:24,2:26:7.46:0,7,533	0/0:36,0:36:70.43:0,70,985	0/1:27,1:28:32.07:32,0,634	0/0:7,0:7:20.81:0,21,292
chr10	89102398	.	TAC	T	1167.85	PASS	AB=0.854;AC=7;AF=0.125;AN=56;BaseQRankSum=5.030;DP=1151;FS=2.364;HRun=0;HaplotypeScore=205.8302;InbreedingCoeff=0.5183;MQ=49.66;MQ0=27;MQRankSum=-3.110;QD=5.48;ReadPosRankSum=-3.665;VQSLOD=2.9061;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,19:50:3.64:0,4,21	0/0:14,0:14:23.73:0,24,350	0/0:66,0:17:50.97:0,51,665	0/0:85,0:21:48.02:0,48,679	0/0:26,0:26:69.17:0,69,1030	0/0:28,0:28:58.73:0,59,895	1/1:8,37:45:38.98:487,39,0	1/1:34,13:46:44.75:659,45,0	0/1:12,28:40:7.27:125,0,7	0/0:44,0:44:84.85:0,85,1444	0/0:23,0:23:27.06:0,27,411	0/1:45,0:45:6.69:7,0,1402	0/0:35,0:35:96.30:0,96,1500	0/0:25,0:25:59.76:0,60,916	0/0:61,0:61:99:0,169,2655	0/0:52,0:52:99:0,129,2073	0/1:35,1:35:30.24:30,0,580	0/0:21,1:21:12.52:0,13,603	0/0:26,1:24:10.61:0,11,576	0/0:32,0:31:58.50:0,58,1087	0/0:90,1:89:99:0,157,2922	0/0:48,0:47:99:0,108,1624	0/0:28,0:27:69.20:0,69,1079	0/0:59,0:59:99:0,135,2095	0/0:28,0:28:63.19:0,63,970	0/0:41,0:41:65.70:0,66,1524	0/0:33,0:33:32.15:0,32,1132	0/0:18,0:18:54.07:0,54,814
chr10	89102422	.	CATGCAT	C	855.63	PASS	AB=0.919;AC=4;AF=0.071;AN=56;BaseQRankSum=8.361;DP=1180;FS=16.585;HRun=0;HaplotypeScore=302.6524;InbreedingCoeff=-0.0778;MQ=50.18;MQ0=22;MQRankSum=-7.520;QD=5.67;ReadPosRankSum=-4.049;VQSLOD=0.4309;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:19.45:0,19,63	0/0:17,0:17:27.17:0,27,637	0/0:64,0:22:63.21:0,63,1818	0/0:78,1:25:55.73:0,56,1612	0/0:22,0:22:63.20:0,63,1883	0/0:27,0:27:75.24:0,75,2507	0/0:50,0:50:65.78:0,66,2138	0/1:30,17:45:99:749,0,1781	0/1:38,1:39:99:101,0,286	0/0:50,0:50:15.01:0,15,2658	0/0:25,0:25:33.19:0,33,477	0/0:48,0:48:99:0,104,3954	0/0:41,0:41:99:0,117,3600	0/0:27,0:27:72.24:0,72,2283	0/0:66,0:66:99:0,187,6411	0/0:55,0:55:99:0,156,5074	0/1:36,0:36:28.92:29,0,1027	0/1:28,1:28:86.76:87,0,1566	0/0:23,0:20:51.15:0,51,1708	0/0:34,0:33:87.17:0,87,2847	0/0:92,0:90:99:0,233,7473	0/0:38,0:37:99:0,102,3405	0/0:30,0:29:87.30:0,87,2907	0/0:62,0:62:99:0,150,4901	0/0:29,0:29:78.13:0,78,2539	0/0:48,0:48:99:0,132,4324	0/0:36,0:36:83.28:0,83,2967	0/0:21,0:21:51.13:0,51,1666
chr10	89102428	.	T	TATACACAC	7036.45	PASS	AB=0.735;AC=13;AF=0.232;AN=56;BaseQRankSum=2.320;DP=1180;FS=5.877;HRun=0;HaplotypeScore=334.4335;InbreedingCoeff=0.8059;MQ=50.90;MQ0=12;MQRankSum=-9.455;QD=22.99;ReadPosRankSum=-2.930;VQSLOD=3.0532;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,16:44:0.30:0,0,2	1/1:6,11:18:8.73:223,9,0	0/0:52,0:23:42.09:0,42,858	0/0:69,0:26:32.79:0,33,447	0/0:22,0:22:42.11:0,42,954	0/0:29,0:29:63.18:0,63,1422	0/0:52,0:52:68.47:0,68,1494	1/1:48,0:44:56.95:1971,57,0	1/1:31,9:40:22.41:453,22,0	1/1:15,40:62:99:3833,119,0	0/1:5,18:26:0.22:0,0,2	0/0:47,0:47:99:0,99,2368	0/0:43,0:43:96.25:0,96,2221	0/0:25,0:25:57.18:0,57,1409	0/0:65,0:65:99:0,141,3559	0/0:54,0:55:99:0,129,2972	1/1:21,16:40:25.11:536,25,0	0/1:27,0:27:20.81:21,0,982	0/0:26,0:24:45.13:0,45,977	0/0:36,0:35:71.17:0,71,1534	0/0:90,0:89:99:0,192,4558	0/0:39,0:39:84.09:0,84,1943	0/0:31,0:31:81.23:0,81,1902	0/0:60,0:60:99:0,117,2870	0/0:29,0:29:72.22:0,72,1731	0/0:46,0:46:99:0,117,2784	0/0:39,0:38:92.50:0,93,1893	0/0:18,0:18:42.08:0,42,1030
chr10	89102710	.	GAC	G	1046.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.262;DP=1024;FS=6.893;HRun=0;HaplotypeScore=153.9878;InbreedingCoeff=0.9676;MQ=54.47;MQ0=10;MQRankSum=3.263;QD=23.78;ReadPosRankSum=-3.801;VQSLOD=3.2280;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:42.14:0,42,706	0/0:9,0:9:11.96:0,12,145	0/0:49,0:19:44.89:0,45,682	0/0:54,0:27:59.80:0,60,892	0/0:19,0:19:54.16:0,54,871	0/0:20,0:20:50.31:0,50,771	0/0:29,0:29:66.19:0,66,1061	1/1:25,19:42:93.24:1141,93,0	0/0:52,0:52:54.56:0,55,837	0/0:49,0:49:99:0,120,1836	0/0:16,0:16:36.12:0,36,610	0/0:55,0:55:99:0,156,2426	0/0:32,0:32:87.25:0,87,1398	0/0:35,0:35:87.28:0,87,1409	0/0:62,0:62:99:0,154,2443	0/0:40,0:40:99:0,105,1716	0/0:37,0:37:78.70:0,79,1270	0/0:29,0:29:43.05:0,43,931	0/0:21,0:19:48.09:0,48,697	0/0:30,0:30:69.19:0,69,1084	0/0:72,0:72:99:0,165,2667	0/0:33,0:33:83.96:0,84,1276	0/0:20,0:20:39.11:0,39,607	0/0:58,0:57:99:0,141,2295	0/0:29,0:29:66.21:0,66,1084	0/0:49,0:49:99:0,132,2182	0/0:36,0:36:90.31:0,90,1514	0/0:11,0:11:24.05:0,24,378
chr10	89102761	.	A	ACACA	642.45	PASS	AB=1.000;AC=16;AF=0.308;AN=52;BaseQRankSum=4.280;DP=911;FS=3.821;HRun=0;HaplotypeScore=178.7831;InbreedingCoeff=0.5333;MQ=53.60;MQ0=20;MQRankSum=0.290;QD=2.12;ReadPosRankSum=-4.041;VQSLOD=1.7808;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:34:11.68:14,0,12	1/1:2,7:10:3.01:51,3,0	./.	./.	0/0:22,0:22:38.91:0,39,509	0/0:26,0:25:45.18:0,45,645	0/0:33,0:33:41.41:0,41,560	1/1:45,0:39:2.89:21,3,0	0/1:46,0:46:17.88:19,0,18	1/1:43,0:41:14.73:396,15,0	1/1:18,0:16:6:77,6,0	0/0:44,0:43:62.12:0,62,913	0/0:33,0:33:65.86:0,66,908	0/0:29,0:29:63.16:0,63,882	0/0:49,0:48:75.84:0,76,1032	0/0:47,0:47:96.23:0,96,1355	1/1:33,0:32:10.19:81,10,0	0/0:21,0:20:35.02:0,35,441	0/1:19,0:15:29.75:60,0,30	0/1:26,0:25:19.25:19,0,70	0/0:82,0:79:73.41:0,73,968	0/0:35,0:35:53.65:0,54,762	0/0:26,0:25:35.81:0,36,458	0/0:48,0:48:46.64:0,47,831	0/0:34,0:34:66.21:0,66,997	0/0:47,0:47:75.38:0,75,1088	1/1:28,0:28:15.35:75,15,0	0/0:10,0:10:8.57:0,9,252
chr10	89103365	.	C	CTGCCTTT	5915.25	PASS	AB=0.684;AC=7;AF=0.125;AN=56;BaseQRankSum=-1.475;DP=752;FS=8.309;HRun=0;HaplotypeScore=175.0322;InbreedingCoeff=0.8353;MQ=76.20;MQ0=0;MQRankSum=-11.411;QD=56.88;ReadPosRankSum=-3.489;VQSLOD=3.5546;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,105,2517	0/1:7,6:13:48.75:646,0,49	0/0:26,0:26:59.99:0,60,1332	0/0:21,0:21:38.16:0,38,796	0/0:18,0:18:42.14:0,42,961	0/0:18,0:18:54.17:0,54,1240	0/0:32,0:32:87.26:0,87,1998	0/0:25,0:25:63.21:0,63,1459	0/0:29,0:29:78.25:0,78,1853	1/1:12,20:34:75.24:2541,75,0	1/1:13,15:29:48.16:1144,48,0	0/0:36,0:36:99:0,102,2374	0/0:31,0:31:84.29:0,84,2057	0/0:36,0:36:96.33:0,96,2376	0/0:35,0:35:99:0,102,2360	0/0:24,0:24:69.23:0,69,1660	1/1:10,16:28:49.01:1584,49,0	0/0:32,0:32:78.22:0,78,1804	0/0:21,0:21:39.13:0,39,890	0/0:15,0:15:39.12:0,39,891	0/0:42,0:42:99:0,114,2721	0/0:22,0:22:54.18:0,54,1310	0/0:10,0:10:20.11:0,20,519	0/0:35,0:35:93.32:0,93,2280	0/0:18,0:18:51.17:0,51,1225	0/0:28,0:28:66.23:0,66,1587	0/0:25,0:24:72.20:0,72,1629	0/0:29,0:29:57.65:0,58,1356
chr10	89104490	.	AT	A	1102.35	PASS	AB=0.844;AC=24;AF=0.429;AN=56;BaseQRankSum=11.112;DP=687;FS=0.770;HRun=15;HaplotypeScore=85.5967;InbreedingCoeff=0.2985;MQ=70.62;MQ0=1;MQRankSum=0.309;QD=2.58;ReadPosRankSum=5.455;VQSLOD=-0.3357;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,37:54:84.70:521,85,0	1/1:4,0:14:20.33:59,20,0	0/0:19,0:15:8.02:0,8,54	0/0:11,0:8:12.61:0,13,80	0/0:23,0:23:18.03:0,18,254	0/0:18,2:22:3.13:0,3,241	0/1:19,2:24:14.18:14,0,204	1/1:12,1:30:33.40:106,33,0	1/1:12,5:19:24.55:143,25,0	1/1:9,0:26:30.72:87,31,0	1/1:2,0:13:16.24:47,16,0	0/0:14,0:14:14.72:0,15,132	0/1:22,5:28:38.96:39,0,201	0/0:17,0:18:30.63:0,31,232	0/0:30,3:34:24.04:0,24,469	0/0:25,2:29:21.70:0,22,323	1/1:8,0:28:32.13:94,32,0	0/1:22,3:25:3.87:4,0,328	0/1:17,2:19:5.45:5,0,160	0/0:28,1:35:32.77:0,33,379	0/1:17,3:22:20.60:21,0,242	0/1:19,6:26:19.08:19,0,190	0/1:19,2:21:1.71:2,0,213	0/0:25,2:29:14.34:0,14,370	0/1:22,9:33:81.47:81,0,231	0/1:19,2:21:8.49:8,0,177	0/1:17,6:24:41.94:42,0,180	0/0:21,4:26:18.31:0,18,380
chr10	89106181	.	CT	C	3067.43	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.102;DP=744;FS=0.408;HRun=4;HaplotypeScore=106.9718;InbreedingCoeff=0.9990;MQ=88.59;MQ0=0;MQRankSum=-3.729;QD=33.34;ReadPosRankSum=0.198;VQSLOD=3.1285;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,168,2295	1/1:0,9:9:27.08:324,27,0	0/0:26,0:26:72.23:0,72,957	0/0:30,0:30:81.24:0,81,1020	0/0:16,0:16:48.16:0,48,672	0/0:18,0:18:54.17:0,54,741	0/0:37,0:37:99:0,111,1520	0/0:32,0:31:93.31:0,93,1303	0/0:23,0:23:63.16:0,63,842	1/1:0,29:29:87.25:1033,87,0	1/1:0,11:11:33.10:396,33,0	0/0:24,0:24:72.24:0,72,1008	0/0:28,0:28:78.26:0,78,1091	0/0:25,0:25:72.24:0,72,1008	0/0:37,0:37:99:0,102,1428	0/0:22,0:22:60.20:0,60,840	1/1:1,42:43:99:1476,123,0	0/0:31,0:31:90.28:0,90,1235	0/0:28,0:28:78.24:0,78,1062	0/0:9,0:9:24.08:0,24,336	0/0:48,0:48:99:0,135,1874	0/0:19,0:19:54.18:0,54,756	0/0:22,0:22:66.16:0,66,885	0/0:30,1:31:54.30:0,54,1182	0/0:13,0:13:39.11:0,39,527	0/0:30,0:30:81.21:0,81,1062	0/0:28,0:28:84.28:0,84,1173	0/0:19,0:19:39.13:0,39,546
chr10	89106850	.	ACAGCTCAGCT	A	1966.80	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.044;DP=741;FS=4.959;HRun=0;HaplotypeScore=248.8939;InbreedingCoeff=0.9610;MQ=84.73;MQ0=7;MQRankSum=-5.469;QD=35.76;ReadPosRankSum=0.641;VQSLOD=3.0054;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:30:35.81:0,36,1103	0/0:10,0:10:27.08:0,27,1205	0/0:33,0:29:31.77:0,32,1680	0/0:72,0:49:99:0,116,3263	0/0:27,0:27:75.26:0,75,3774	0/0:19,0:19:39.13:0,39,1962	0/0:37,0:37:81.26:0,81,3776	0/0:26,0:26:63.21:0,63,2816	0/0:15,0:22:36.11:0,36,1268	0/0:17,0:17:33.11:0,33,1381	0/0:10,0:10:30.10:0,30,1506	0/0:29,0:29:69.24:0,69,3190	0/0:26,0:26:72.25:0,72,3404	0/0:24,0:24:63.20:0,63,2481	0/0:23,0:23:54.18:0,54,2393	0/0:16,0:16:48.15:0,48,2238	0/0:42,0:42:99:0,105,4916	0/0:19,0:18:54.14:0,54,2472	1/1:13,8:21:24.06:616,24,0	1/1:5,12:17:24.04:660,24,0	0/0:67,0:67:99:0,163,7928	0/0:16,0:16:39.13:0,39,1894	0/0:17,0:17:48.16:0,48,2263	0/0:31,0:31:75.26:0,75,3507	0/0:27,0:27:63.20:0,63,2839	0/0:35,0:35:84.27:0,84,3794	1/1:3,14:17:27.09:833,27,0	0/0:9,0:9:6.02:0,6,305
chr10	89106992	.	T	TCA	6273.32	PASS	AB=0.947;AC=15;AF=0.268;AN=56;BaseQRankSum=0.068;DP=498;FS=2.358;HRun=0;HaplotypeScore=69.8667;InbreedingCoeff=0.9102;MQ=81.73;MQ0=0;MQRankSum=-5.052;QD=41.82;ReadPosRankSum=-0.046;VQSLOD=6.1525;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:27:78.27:1476,78,0	1/1:4,6:11:21.07:392,21,0	0/0:14,0:14:37.53:0,38,464	0/0:16,0:16:47.97:0,48,626	0/0:20,0:20:57.19:0,57,870	0/0:14,0:14:33.10:0,33,484	0/0:34,0:34:99:0,99,1480	1/1:5,17:22:60.19:1107,60,0	1/1:5,11:16:39.13:739,39,0	1/1:4,10:14:36.12:656,36,0	1/1:2,5:7:12.50:195,12,0	0/0:21,0:21:60.20:0,60,908	0/0:10,0:10:30.10:0,30,454	0/0:18,0:18:54.18:0,54,825	0/0:16,0:16:45.15:0,45,685	0/0:15,0:15:45.15:0,45,689	1/1:7,28:35:90.31:1704,90,0	0/0:21,0:21:54.18:0,54,827	0/0:16,0:16:45.14:0,45,669	0/0:9,0:9:21.07:0,21,308	0/0:33,0:33:99:0,99,1502	0/0:13,0:13:36.12:0,36,550	0/0:9,0:9:24.08:0,24,357	0/0:23,0:23:69.23:0,69,1051	0/0:18,0:18:51.17:0,51,765	0/1:17,1:18:3.79:4,0,689	0/0:26,0:26:75.25:0,75,1145	0/0:2,0:2:6.02:0,6,92
chr10	89107026	.	CA	C	696.97	PASS	AB=0.990;AC=10;AF=0.179;AN=56;BaseQRankSum=14.088;DP=574;FS=4.915;HRun=1;HaplotypeScore=76.4437;InbreedingCoeff=0.4625;MQ=81.74;MQ0=0;MQRankSum=-3.314;QD=4.56;ReadPosRankSum=0.012;VQSLOD=0.3387;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:41.09:158,0,41	0/1:13,0:13:28.50:53,0,28	0/0:24,0:25:70.43:0,70,955	0/0:13,0:13:29.22:0,29,413	0/0:28,0:28:84.27:0,84,1136	0/0:22,0:22:63.16:0,63,832	0/0:33,0:33:99:0,99,1317	0/1:22,1:23:12.56:83,0,13	1/1:18,1:19:4.88:138,5,0	1/1:16,1:17:32.02:173,32,0	1/1:14,1:15:10.64:96,11,0	0/0:18,0:18:51.14:0,51,670	0/0:22,0:22:66.18:0,66,837	0/0:21,0:21:60.19:0,60,824	0/0:15,0:15:42.07:0,42,512	0/0:16,0:16:48.15:0,48,652	0/1:31,0:31:60.02:149,0,60	0/0:21,0:21:63.13:0,63,815	0/0:21,0:21:62.87:0,63,742	0/0:17,0:17:45.03:0,45,559	0/0:37,0:37:99:0,102,1361	0/0:19,0:19:57.10:0,57,707	0/0:6,0:6:18.06:0,18,250	0/0:22,0:22:66.13:0,66,846	0/0:16,0:16:45.11:0,45,569	0/0:17,0:17:51.13:0,51,661	0/0:28,0:28:84.26:0,84,1136	0/0:4,0:4:12.04:0,12,167
chr10	89107027	.	AC	A	3467.35	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.936;DP=579;FS=3.399;HRun=7;HaplotypeScore=68.0103;InbreedingCoeff=0.9926;MQ=81.55;MQ0=0;MQRankSum=-4.509;QD=22.52;ReadPosRankSum=-1.454;VQSLOD=3.1282;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:5,30:35:63.13:640,63,0	1/1:1,12:13:27.06:275,27,0	0/0:25,0:25:66.89:0,67,787	0/0:13,0:13:33.04:0,33,369	0/0:28,0:28:84.26:0,84,1045	0/0:22,0:22:57.18:0,57,717	0/0:35,0:35:99:0,99,1218	1/1:5,19:24:66.14:668,66,0	1/1:3,16:19:51.11:520,51,0	1/1:1,16:17:39.07:395,39,0	1/1:2,13:15:33.07:335,33,0	0/0:18,0:18:51.11:0,51,611	0/0:22,0:22:63.18:0,63,777	0/0:21,0:21:63.17:0,63,766	0/0:14,0:14:39.11:0,39,477	0/0:17,0:17:48.14:0,48,592	1/1:6,25:31:63.11:634,63,0	0/0:21,0:21:54.17:0,54,679	0/0:21,0:21:51.16:0,51,635	0/0:18,0:18:42.11:0,42,513	0/0:37,0:37:99:0,105,1267	0/0:20,0:20:51.15:0,51,629	0/0:6,0:6:18.06:0,18,226	0/0:21,0:21:60.19:0,60,754	0/0:16,0:16:45.13:0,45,553	0/0:18,0:18:45.14:0,45,566	0/0:27,0:27:81.26:0,81,1014	0/0:5,0:5:12.04:0,12,151
chr10	89107776	.	CA	C	2266.87	PASS	AB=0.987;AC=45;AF=0.804;AN=56;BaseQRankSum=8.604;DP=319;FS=13.421;HRun=1;HaplotypeScore=171.2761;InbreedingCoeff=0.0699;MQ=71.73;MQ0=0;MQRankSum=-4.146;QD=7.95;ReadPosRankSum=6.879;VQSLOD=-0.6709;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:22.99:108,23,0	1/1:3,0:3:8.08:36,8,0	0/0:19,0:18:0.10:0,0,227	0/0:15,0:15:11.28:0,11,167	1/1:9,0:9:9.10:49,9,0	0/1:6,0:6:26.47:26,0,28	1/1:18,0:18:14.50:143,14,0	0/1:16,0:16:51.25:67,0,51	1/1:17,0:17:27.33:184,27,0	0/1:8,0:8:28.06:59,0,28	1/1:4,1:5:1.69:30,2,0	1/1:15,0:15:24.96:203,25,0	1/1:14,1:15:9.86:140,10,0	1/1:12,0:12:34.04:182,34,0	0/1:9,1:10:0.63:100,0,1	1/1:10,0:10:7.74:83,8,0	0/1:10,0:10:24.63:59,0,25	1/1:6,1:7:15.77:86,16,0	1/1:13,0:13:26.24:104,26,0	1/1:6,0:6:7.04:33,7,0	1/1:16,0:16:9.55:105,10,0	1/1:12,0:12:26.25:136,26,0	1/1:9,0:9:13.51:70,14,0	1/1:12,0:12:14.02:76,14,0	1/1:12,0:12:28.23:132,28,0	0/1:12,0:12:11.06:68,0,11	0/1:14,0:14:45.04:60,0,45	1/1:7,0:7:16.04:73,16,0
chr10	89107777	.	AC	A	7136.24	PASS	AB=0.803;AC=54;AF=0.964;AN=56;BaseQRankSum=1.847;DP=312;FS=14.600;HRun=3;HaplotypeScore=154.3063;InbreedingCoeff=-0.0446;MQ=69.39;MQ0=0;MQRankSum=-4.944;QD=22.87;ReadPosRankSum=3.644;VQSLOD=3.2578;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,9:11:27.02:277,27,0	1/1:0,3:3:9.02:91,9,0	0/1:13,5:17:99:158,0,112	0/1:11,2:14:58.45:83,0,58	1/1:0,9:9:17.18:147,17,0	1/1:2,4:6:11.99:115,12,0	1/1:2,15:17:42.09:440,42,0	1/1:4,12:16:30.05:313,30,0	1/1:2,15:17:48.06:488,48,0	1/1:1,6:7:18.04:196,18,0	1/1:2,3:5:11.72:85,12,0	1/1:1,14:15:42.11:464,42,0	1/1:4,11:15:38.76:372,39,0	1/1:2,10:12:36.10:398,36,0	1/1:2,8:10:26.95:268,27,0	1/1:2,8:10:27.02:272,27,0	1/1:4,4:8:17.98:189,18,0	1/1:2,5:7:21.01:214,21,0	1/1:2,11:13:36.03:366,36,0	1/1:2,4:6:11.94:110,12,0	1/1:2,13:15:29.98:314,30,0	1/1:2,10:12:30.02:310,30,0	1/1:2,7:9:20.83:191,21,0	1/1:1,11:12:20.74:197,21,0	1/1:1,11:12:35.98:355,36,0	1/1:3,9:12:27.02:274,27,0	1/1:6,8:14:24.01:243,24,0	1/1:0,7:7:20.99:209,21,0
chr10	89107782	.	G	GC	4111.74	PASS	AB=1.000;AC=54;AF=0.964;AN=56;BaseQRankSum=2.474;DP=282;FS=19.190;HRun=0;HaplotypeScore=165.2703;InbreedingCoeff=-0.0449;MQ=66.57;MQ0=0;MQRankSum=-5.593;QD=14.58;ReadPosRankSum=3.147;VQSLOD=3.8959;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:26.13:151,26,0	1/1:0,3:3:8.71:50,9,0	0/1:18,0:17:99:106,0,115	0/1:10,0:10:46.51:69,0,47	1/1:0,9:9:16.81:81,17,0	1/1:0,4:4:11.57:62,12,0	1/1:1,16:17:40.80:255,41,0	1/1:1,13:14:34.98:264,35,0	1/1:1,16:17:48.26:256,48,0	1/1:0,7:7:20.02:141,20,0	1/1:0,4:4:11.49:61,11,0	1/1:2,12:14:28.56:164,29,0	1/1:1,12:13:36.84:213,37,0	1/1:1,10:11:31.01:159,31,0	1/1:0,9:9:25.89:137,26,0	1/1:0,8:8:23.18:130,23,0	1/1:4,5:9:20.22:118,20,0	1/1:0,6:6:17.91:137,18,0	1/1:2,11:13:35.91:295,36,0	1/1:1,4:5:14.23:93,14,0	1/1:2,14:16:32.04:193,32,0	1/1:1,9:10:19.65:125,20,0	1/1:0,7:7:20.12:106,20,0	1/1:1,11:12:19.60:95,20,0	1/1:1,11:12:34.76:208,35,0	1/1:1,8:9:26.76:188,27,0	1/1:1,7:8:20.36:121,20,0	1/1:0,7:7:20.58:132,21,0
chr10	89107788	.	CA	C	6487.37	PASS	AB=0.829;AC=54;AF=0.964;AN=56;BaseQRankSum=1.641;DP=274;FS=1.519;HRun=2;HaplotypeScore=157.1912;InbreedingCoeff=-0.0472;MQ=65.21;MQ0=0;MQRankSum=-5.030;QD=23.68;ReadPosRankSum=3.516;VQSLOD=4.7282;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:10:23.79:216,24,0	1/1:0,3:3:9.02:96,9,0	0/1:9,2:10:44.44:44,0,56	0/1:10,3:13:88.58:89,0,109	1/1:2,9:11:14.46:149,14,0	1/1:0,4:4:11.99:116,12,0	1/1:2,14:16:44.76:438,45,0	1/1:0,12:13:30.46:308,30,0	1/1:1,14:16:47.80:447,48,0	1/1:1,5:8:20.90:199,21,0	1/1:0,3:4:8.87:67,9,0	1/1:1,13:15:45.04:483,45,0	1/1:2,10:13:35.38:331,35,0	1/1:0,11:11:33.07:357,33,0	1/1:1,8:9:24.02:251,24,0	1/1:1,7:8:24.02:239,24,0	1/1:1,5:6:14.53:149,15,0	1/1:0,7:7:21.01:206,21,0	1/1:1,12:13:38.59:378,39,0	1/1:1,4:5:10.27:103,10,0	1/1:0,15:15:20.76:202,21,0	1/1:1,10:11:30.03:321,30,0	1/1:0,7:7:20.87:196,21,0	1/1:1,11:12:20.74:200,21,0	1/1:1,9:11:29.98:287,30,0	1/1:2,6:8:24.01:241,24,0	1/1:0,5:7:20.94:199,21,0	1/1:1,6:7:17.99:174,18,0
chr10	89107793	.	CA	C	4383.03	PASS	AB=0.962;AC=54;AF=0.964;AN=56;BaseQRankSum=2.464;DP=274;FS=18.642;HRun=2;HaplotypeScore=165.3309;InbreedingCoeff=0.2768;MQ=64.86;MQ0=0;MQRankSum=-3.617;QD=16.00;ReadPosRankSum=3.420;VQSLOD=3.4946;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,6:10:20.85:172,21,0	1/1:0,3:3:8.80:68,9,0	0/1:10,0:9:11.44:11,0,44	0/1:10,1:12:0.18:0,0,76	1/1:3,6:10:14.21:119,14,0	1/1:1,3:4:8.98:78,9,0	1/1:3,12:17:39.83:373,40,0	1/1:8,6:14:27.15:233,27,0	1/1:2,13:15:44.74:374,45,0	1/1:5,3:9:11.19:122,11,0	1/1:3,1:4:5.98:50,6,0	1/1:8,7:15:40.63:267,41,0	1/1:6,6:12:24.22:172,24,0	1/1:5,7:12:13.78:185,14,0	1/1:4,5:9:18.76:145,19,0	1/1:2,6:8:19.11:159,19,0	1/1:3,4:7:16.37:154,16,0	1/1:1,6:7:18.48:179,18,0	1/1:5,8:13:25.72:226,26,0	1/1:2,2:5:8.80:57,9,0	1/1:4,12:16:20.90:178,21,0	1/1:3,7:10:25.31:180,25,0	1/1:2,5:7:17.94:153,18,0	1/1:7,4:12:12.64:89,13,0	1/1:3,7:11:26.86:217,27,0	1/1:1,5:7:17.99:156,18,0	1/1:5,4:9:21.59:135,22,0	1/1:3,3:6:14.96:130,15,0
chr10	89107807	.	T	TC	589.50	PASS	AB=0.992;AC=39;AF=0.696;AN=56;BaseQRankSum=4.110;DP=244;FS=3.465;HRun=0;HaplotypeScore=153.7928;InbreedingCoeff=0.1433;MQ=62.02;MQ0=0;MQRankSum=-4.364;QD=2.79;ReadPosRankSum=5.457;VQSLOD=3.0889;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:7:16.81:17,0,18	1/1:4,0:4:3.66:12,4,0	0/0:7,0:6:5.26:0,5,26	0/0:9,0:10:3.58:0,4,92	1/1:10,2:12:10.95:47,11,0	1/1:3,0:3:5.50:16,6,0	1/1:16,0:16:29.47:95,29,0	0/0:12,1:13:4.80:0,5,84	0/1:15,0:15:27.30:27,0,37	1/1:8,2:10:1.22:44,1,0	1/1:5,0:5:4.72:16,5,0	1/1:10,0:11:15.60:64,16,0	0/1:9,0:9:12.98:13,0,25	0/1:9,0:9:2.22:2,0,65	0/1:7,0:7:4.77:36,0,5	0/1:7,0:7:2.82:3,0,59	0/1:6,0:6:6.14:6,0,14	0/1:8,0:8:4.80:5,0,64	0/1:12,1:13:29.76:30,0,39	1/1:2,2:4:5.38:40,5,0	1/1:15,0:15:9.21:44,9,0	1/1:11,0:11:15:49,15,0	1/1:5,0:5:2.37:8,2,0	1/1:8,0:8:9.28:32,9,0	1/1:10,0:10:13.12:41,13,0	1/1:8,0:8:6.92:28,7,0	1/1:7,1:8:18.12:72,18,0	0/0:3,0:3:3.30:0,3,56
chr10	89107843	.	CCA	C	7359.41	PASS	AB=0.892;AC=47;AF=0.870;AN=54;BaseQRankSum=-5.016;DP=275;FS=9.453;HRun=0;HaplotypeScore=79.0398;InbreedingCoeff=0.3843;MQ=80.83;MQ0=1;MQRankSum=-0.957;QD=28.41;ReadPosRankSum=4.072;VQSLOD=6.0259;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:3.86:0,4,16	1/1:0,5:5:11.97:148,12,0	0/1:15,5:16:99:129,0,183	0/1:12,2:12:65.35:138,0,65	1/1:1,9:10:20.97:263,21,0	1/1:0,4:4:12.04:179,12,0	1/1:0,16:16:39.13:576,39,0	0/1:11,0:11:24.54:25,0,31	0/0:6,0:6:11.69:0,12,92	1/1:1,14:15:42.12:567,42,0	1/1:0,7:7:12.04:179,12,0	1/1:0,8:8:24.08:342,24,0	1/1:0,7:7:15.05:220,15,0	1/1:3,7:10:26.12:363,26,0	1/1:0,10:10:27.09:401,27,0	1/1:1,4:5:15.05:212,15,0	1/1:1,11:12:27.09:394,27,0	1/1:0,10:10:21.07:314,21,0	1/1:0,11:11:30.08:404,30,0	1/1:0,7:7:18.06:260,18,0	1/1:0,19:19:17.99:242,18,0	1/1:1,10:11:29.99:415,30,0	1/1:1,6:7:11.72:179,12,0	1/1:3,10:13:35.98:478,36,0	1/1:1,8:9:21.07:309,21,0	1/1:0,12:12:33.07:447,33,0	1/1:1,5:6:12.04:178,12,0	./.
chr10	89107844	.	CA	C	3197.14	PASS	AB=0.933;AC=52;AF=0.963;AN=54;BaseQRankSum=-3.265;DP=272;FS=21.496;HRun=3;HaplotypeScore=89.0733;InbreedingCoeff=-0.0493;MQ=80.79;MQ0=1;MQRankSum=-3.681;QD=11.75;ReadPosRankSum=2.792;VQSLOD=0.9942;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:10:18:197,18,0	1/1:5,0:5:11.53:62,12,0	0/1:20,0:16:55.91:56,0,94	0/1:11,1:11:37.95:50,0,38	1/1:9,0:10:17.45:98,17,0	1/1:4,0:4:11.61:63,12,0	1/1:16,0:16:37.57:201,38,0	1/1:6,4:10:26.85:247,27,0	1/1:4,2:6:16.41:121,16,0	1/1:15,0:15:38.63:222,39,0	1/1:7,0:7:11.58:63,12,0	1/1:8,0:8:22.88:119,23,0	1/1:7,0:7:14.40:76,14,0	1/1:7,2:10:28.96:158,29,0	1/1:10,0:10:26.03:141,26,0	1/1:4,0:5:14.45:77,14,0	1/1:11,0:12:26.02:140,26,0	1/1:10,0:10:20.32:111,20,0	1/1:11,0:11:29.22:180,29,0	1/1:7,0:7:17.38:94,17,0	1/1:19,0:19:14.50:79,15,0	1/1:10,0:11:29.02:158,29,0	1/1:6,0:7:11.61:63,12,0	1/1:13,0:13:34.69:189,35,0	1/1:9,0:9:20.16:107,20,0	1/1:12,0:12:28.96:164,29,0	1/1:5,0:5:11.58:63,12,0	./.
chr10	89108597	.	TC	T	2879.08	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.480;DP=541;FS=8.075;HRun=1;HaplotypeScore=53.4176;InbreedingCoeff=0.9949;MQ=74.71;MQ0=0;MQRankSum=-0.356;QD=35.54;ReadPosRankSum=1.217;VQSLOD=3.2013;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1790	1/1:0,12:12:33.11:461,33,0	0/0:15,0:14:35.27:0,35,557	0/0:12,0:11:33.07:0,33,509	0/0:34,0:34:99:0,99,1544	0/0:18,0:18:54.18:0,54,863	0/0:18,0:18:51.17:0,51,815	0/0:38,0:38:99:0,114,1780	0/0:16,0:16:48.16:0,48,767	1/1:0,16:16:48.16:671,48,0	1/1:0,24:24:63.17:859,63,0	0/0:18,0:18:54.17:0,54,834	0/0:10,0:10:30.08:0,30,452	0/0:14,0:14:39.09:0,39,616	0/0:23,0:23:66.23:0,66,1055	0/0:16,0:16:48.15:0,48,744	1/1:1,28:29:75.25:1048,75,0	0/0:12,0:12:36.12:0,36,573	0/0:19,0:19:57.18:0,57,868	0/0:28,0:28:84.29:0,84,1339	0/0:21,0:21:60.20:0,60,959	0/0:10,0:10:27.09:0,27,429	0/0:16,0:16:48.16:0,48,767	0/0:5,0:5:15.03:0,15,216	0/0:18,0:18:54.17:0,54,836	0/0:16,0:16:48.16:0,48,766	0/0:16,0:16:48.16:0,48,764	0/0:28,0:28:84.26:0,84,1312
chr10	89109183	.	T	TGATAGATAGATA	3082.61	PASS	AB=0.694;AC=27;AF=0.540;AN=50;BaseQRankSum=0.269;DP=671;FS=21.526;HRun=0;HaplotypeScore=226.7781;InbreedingCoeff=0.7004;MQ=63.91;MQ0=7;MQRankSum=-2.635;QD=8.68;ReadPosRankSum=-0.496;VQSLOD=1.1973;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:29:8.96:191,9,0	0/0:4,0:8:3.11:0,3,7	./.	./.	./.	1/1:15,9:30:6.02:334,6,0	1/1:15,0:21:5.78:177,6,0	1/1:31,0:31:5.98:72,6,0	0/0:19,0:32:11.84:0,12,32	0/1:19,0:33:14.35:101,0,14	0/0:18,0:18:18.06:0,18,465	1/1:16,7:28:3.01:148,3,0	0/0:26,0:26:39.11:0,39,1092	1/1:11,10:25:9.03:483,9,0	0/0:22,0:22:36.11:0,36,1087	0/0:8,0:20:7.09:0,7,17	1/1:18,0:24:6.02:152,6,0	1/1:5,0:6:6.02:259,6,0	1/1:14,0:14:6.02:94,6,0	1/1:15,0:18:6.02:147,6,0	0/0:20,0:20:18.93:0,19,421	1/1:18,0:21:4.73:70,5,0	0/0:16,0:16:36.11:0,36,1038	0/0:24,0:24:30.71:0,31,1007	1/1:22,0:32:18.06:411,18,0	0/0:27,0:28:44.98:0,45,1211	1/1:31,0:35:31.90:628,32,0	0/0:20,0:20:39.13:0,39,1037
chr10	89109238	.	TGATAGATAGATAGATA	T	1849.48	PASS	AB=0.822;AC=17;AF=0.340;AN=50;BaseQRankSum=1.384;DP=611;FS=2.769;HRun=0;HaplotypeScore=241.5686;InbreedingCoeff=0.5365;MQ=47.49;MQ0=10;MQRankSum=-3.488;QD=8.56;ReadPosRankSum=-0.774;VQSLOD=2.6587;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,7:20:0.88:0,1,2	1/1:5,2:7:9.03:161,9,0	./.	./.	./.	1/1:17,2:19:6.02:135,6,0	1/1:16,0:16:0.49:2,0,0	0/0:53,0:49:6:0,6,52	0/0:14,0:21:33.10:0,33,1168	0/1:18,0:20:56.63:58,0,57	0/0:6,0:9:0:0,0,0	0/0:17,0:25:30.09:0,30,511	0/0:19,0:26:20.96:0,21,369	0/0:14,0:16:3.57:0,4,19	0/0:23,0:23:33.11:0,33,2201	0/0:19,0:20:33.11:0,33,1543	0/0:14,0:22:33.11:0,33,1187	0/1:9,3:10:99:521,0,133	1/1:21,0:16:6:104,6,0	1/1:26,4:27:14.73:255,15,0	0/0:14,0:22:3:0,3,25	0/1:17,8:24:0.13:0,0,0	0/0:11,0:17:9.33:0,9,143	0/0:16,0:16:2.79:0,3,72	1/1:33,3:36:25.37:508,25,0	0/0:30,0:29:36.08:0,36,1576	1/1:14,14:28:6.41:260,6,0	0/0:16,0:17:15.02:0,15,324
chr10	89109315	.	GAGAC	G	442.49	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.693;DP=704;FS=5.495;HRun=0;HaplotypeScore=153.1552;InbreedingCoeff=0.9587;MQ=72.48;MQ0=6;MQRankSum=-2.950;QD=19.24;ReadPosRankSum=-3.498;VQSLOD=2.6685;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:68.91:0,69,1654	0/0:7,0:7:12.04:0,12,298	0/0:40,0:35:69.18:0,69,1481	0/0:55,0:48:68.89:0,69,1854	0/0:28,0:28:66.23:0,66,1640	0/0:21,0:20:48.16:0,48,1198	0/0:12,0:11:23.97:0,24,485	1/1:10,13:22:36.10:537,36,0	0/0:29,0:29:69.24:0,69,1644	0/0:29,0:29:72.25:0,72,1791	0/0:23,0:23:57.20:0,57,1420	0/0:29,0:29:42.48:0,42,1023	0/0:26,0:25:39.01:0,39,912	0/0:20,0:20:45.15:0,45,1123	0/0:27,0:27:60.21:0,60,1481	0/0:17,0:17:39.13:0,39,974	0/0:26,0:25:48.16:0,48,1160	0/0:14,0:14:33.11:0,33,820	0/0:14,0:14:33.09:0,33,726	0/0:21,0:21:42.01:0,42,1033	0/0:35,0:34:18.37:0,18,1576	0/0:25,0:25:48.16:0,48,1195	0/0:34,0:34:72.08:0,72,1764	0/0:14,0:14:24.08:0,24,591	0/0:25,0:25:63.22:0,63,1574	0/0:32,0:32:79.10:0,79,1698	0/0:28,0:27:57.20:0,57,1414	0/0:18,0:18:51.18:0,51,1273
chr10	89109748	.	A	AGACTGACTGACT	2913.71	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-3.169;DP=786;FS=3.455;HRun=0;HaplotypeScore=258.7589;InbreedingCoeff=0.9329;MQ=75.72;MQ0=7;MQRankSum=-3.411;QD=26.25;ReadPosRankSum=-1.914;VQSLOD=2.5255;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:66.21:0,66,1932	1/1:7,7:18:9.50:390,10,0	0/0:41,0:26:29.30:0,29,452	0/0:64,0:51:15.65:0,16,933	0/0:28,0:28:48.12:0,48,1339	0/0:17,0:17:30.09:0,30,911	0/0:27,0:27:45.15:0,45,1332	0/0:36,0:36:42.05:0,42,908	0/0:20,0:20:45.11:0,45,1311	1/1:19,13:33:45.05:1599,45,0	1/1:11,7:19:5.99:198,6,0	0/0:30,0:30:66.21:0,66,1954	0/0:21,0:21:45.10:0,45,1323	0/0:19,0:19:45.14:0,45,1458	0/0:29,0:29:72.19:0,72,2004	0/0:29,0:29:66.17:0,66,2009	1/1:19,14:40:15.05:875,15,0	0/0:22,0:22:39.06:0,39,944	0/0:14,0:14:30.07:0,30,701	0/0:31,0:31:54.14:0,54,1429	0/0:45,0:45:99:0,111,3203	0/0:25,0:25:36.11:0,36,998	0/0:25,0:25:54.15:0,54,1603	0/0:39,0:39:90.28:0,90,2803	0/0:16,0:16:39.10:0,39,1021	0/0:29,0:29:10.26:0,10,1424	0/0:19,0:18:33.10:0,33,934	0/0:14,0:14:36.12:0,36,1041
chr10	89110601	.	GT	G	5936.21	PASS	AB=0.909;AC=15;AF=0.268;AN=56;BaseQRankSum=10.782;DP=532;FS=0.347;HRun=2;HaplotypeScore=56.2744;InbreedingCoeff=0.9053;MQ=95.67;MQ0=0;MQRankSum=-2.866;QD=34.51;ReadPosRankSum=1.054;VQSLOD=5.0357;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,43:44:99:1699,132,0	1/1:0,11:11:30.10:389,30,0	0/0:29,0:29:82.15:0,82,1174	0/0:25,0:25:64.26:0,64,910	0/0:13,0:13:36.12:0,36,538	0/0:25,0:25:72.24:0,72,1060	0/0:32,0:32:93.29:0,93,1356	1/1:0,27:27:78.22:971,78,0	1/1:0,11:11:30.10:389,30,0	1/1:0,20:20:57.16:722,57,0	1/1:0,11:11:24.08:312,24,0	0/0:15,0:15:45.15:0,45,674	0/0:14,0:14:42.11:0,42,605	0/0:17,0:17:48.16:0,48,719	0/0:13,0:13:39.13:0,39,585	0/0:21,0:21:60.20:0,60,897	1/1:0,38:38:99:1441,111,0	0/0:18,0:17:51.14:0,51,740	0/0:11,0:11:33.11:0,33,493	0/0:19,0:19:51.17:0,51,764	0/0:25,0:25:72.23:0,72,1059	0/1:9,1:10:11.88:12,0,312	0/0:11,0:11:33.11:0,33,495	0/0:28,0:28:84.19:0,84,1190	0/0:9,0:9:21.07:0,21,314	0/0:17,1:18:12.19:0,12,643	0/0:12,0:12:36.12:0,36,539	0/0:5,0:5:15.05:0,15,225
chr10	89110727	.	G	GA	5031.93	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-4.294;DP=616;FS=0.000;HRun=6;HaplotypeScore=61.2788;InbreedingCoeff=0.9984;MQ=82.30;MQ0=1;MQRankSum=-1.296;QD=30.31;ReadPosRankSum=0.474;VQSLOD=5.3096;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,28:32:93.28:1155,93,0	1/1:1,8:9:21.07:264,21,0	0/0:25,0:25:56.62:0,57,537	0/0:14,0:14:24.08:0,24,294	0/0:37,0:37:80.90:0,81,881	0/0:24,0:24:69.15:0,69,703	0/0:31,0:31:81.16:0,81,819	1/1:5,13:18:39.09:463,39,0	1/1:1,24:25:69.21:856,69,0	1/1:3,24:27:66.19:811,66,0	1/1:4,18:22:51.12:623,51,0	0/0:18,0:18:51.08:0,51,507	0/0:12,0:12:33.06:0,33,329	0/0:22,0:22:60.10:0,60,598	0/0:19,0:19:48.09:0,48,483	0/0:17,0:17:48.11:0,48,489	1/1:4,29:33:69.22:860,69,0	0/0:19,0:19:57.04:0,57,559	0/0:17,0:17:48.10:0,48,485	0/0:23,0:23:66.15:0,66,672	0/0:22,0:21:54.10:0,54,543	0/0:17,0:17:48.10:0,48,488	0/0:31,0:31:84.18:0,84,856	0/0:24,0:24:66.13:0,66,666	0/0:20,0:20:51.09:0,51,512	0/0:27,0:26:66.11:0,66,655	0/0:23,0:23:60.08:0,60,584	0/0:8,0:8:24.05:0,24,245
chr10	89110860	.	A	AG	8182.60	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-11.578;DP=604;FS=4.896;HRun=2;HaplotypeScore=57.2612;InbreedingCoeff=0.9965;MQ=83.18;MQ0=0;MQRankSum=-2.653;QD=36.69;ReadPosRankSum=3.325;VQSLOD=5.5051;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,42:44:99:1640,114,0	0/0:7,0:7:15.05:0,15,186	0/0:23,0:24:66.02:0,66,751	0/0:15,0:15:20.97:0,21,312	1/1:3,17:20:51.17:734,51,0	1/1:0,16:16:33.11:474,33,0	1/1:1,23:24:69.23:992,69,0	0/0:20,0:20:57.14:0,57,662	1/1:2,24:26:66.22:950,66,0	0/0:17,0:17:45.13:0,45,539	0/0:18,0:18:51.16:0,51,631	1/1:1,23:24:60.20:862,60,0	0/0:16,0:16:42.13:0,42,520	1/1:1,16:17:39.13:561,39,0	0/0:21,0:21:57.18:0,57,706	0/0:27,0:27:81.23:0,81,970	0/0:42,0:42:99:0,112,1438	1/1:0,19:19:54.18:777,54,0	0/0:20,0:20:54.14:0,54,638	0/0:17,0:17:48.12:0,48,561	0/0:43,0:43:99:0,123,1472	1/1:0,24:24:63.06:851,63,0	0/0:12,0:12:36.01:0,36,410	0/0:39,0:39:99:0,114,1399	1/1:0,9:9:24.08:342,24,0	0/0:15,0:15:42.12:0,42,501	0/0:19,0:19:57.15:0,57,679	0/0:9,0:9:27.08:0,27,334
chr10	89111059	.	AAAGAAAAG	A	7984.91	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=14.691;DP=634;FS=9.211;HRun=0;HaplotypeScore=186.3627;InbreedingCoeff=0.9888;MQ=75.78;MQ0=5;MQRankSum=-14.284;QD=30.83;ReadPosRankSum=0.399;VQSLOD=3.5581;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,2:29:48.05:812,48,0	1/1:5,0:4:9.03:160,9,0	0/0:60,0:31:55.88:0,56,1215	0/0:72,0:35:49.48:0,49,1088	1/1:21,0:21:39.03:613,39,0	1/1:16,0:16:33.08:547,33,0	1/1:18,3:20:45.15:843,45,0	1/1:16,0:15:33.66:349,34,0	1/1:10,1:11:21.07:394,21,0	1/1:28,1:29:71.08:1101,71,0	1/1:15,0:15:21.03:295,21,0	1/1:19,1:20:38.98:635,39,0	0/0:19,0:19:54.65:0,55,2015	1/1:12,0:12:20.99:329,21,0	0/0:13,0:13:39.13:0,39,1424	0/0:23,0:23:66.21:0,66,2511	1/1:14,1:15:24.08:448,24,0	1/1:15,0:15:19.24:379,19,0	0/0:27,0:27:78.26:0,78,2758	0/0:21,0:21:63.20:0,63,2148	0/0:12,0:12:36.12:0,36,1508	1/1:15,0:15:36.12:599,36,0	0/0:26,0:26:78.24:0,78,2782	0/0:43,0:43:99:0,126,5015	1/1:17,1:18:26.41:480,26,0	0/0:22,0:22:66.23:0,66,2610	0/0:28,0:28:81.26:0,81,2886	0/0:9,0:9:27.09:0,27,1142
chr10	89111060	.	AAGAAAAG	A	11021.33	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=13.808;DP=635;FS=9.022;HRun=0;HaplotypeScore=167.3368;InbreedingCoeff=0.9894;MQ=78.48;MQ0=5;MQRankSum=-14.002;QD=43.22;ReadPosRankSum=0.223;VQSLOD=3.9450;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:28:48.05:1039,48,0	1/1:0,5:4:9.03:232,9,0	0/0:62,0:34:53.82:0,54,1155	0/0:73,0:38:35.67:0,36,1083	1/1:0,20:20:39.04:819,39,0	1/1:2,14:16:33.08:810,33,0	1/1:6,15:20:45.15:1098,45,0	1/1:2,14:15:35.94:489,36,0	1/1:2,8:10:21.07:514,21,0	1/1:2,27:29:71.47:1522,71,0	1/1:5,10:15:21.03:427,21,0	1/1:1,19:20:39.13:909,39,0	0/0:19,0:19:54:0,54,1828	1/1:1,11:12:21.07:505,21,0	0/0:13,0:13:39.13:0,39,1288	0/0:23,0:23:66.20:0,66,2257	1/1:1,14:15:24.08:596,24,0	1/1:1,14:15:23.82:510,24,0	0/0:27,0:27:81.28:0,81,2549	0/0:21,0:21:63.19:0,63,1936	0/0:12,0:12:36.12:0,36,1370	1/1:0,15:15:36.12:877,36,0	0/0:26,0:26:78.24:0,78,2501	0/0:42,0:42:99:0,126,4518	1/1:2,15:17:30.02:674,30,0	0/0:22,0:22:66.23:0,66,2354	0/0:28,0:28:81.25:0,81,2614	0/0:9,0:9:27.09:0,27,1031
chr10	89111061	.	AGAAAAG	A	8214.56	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=14.135;DP=630;FS=7.472;HRun=0;HaplotypeScore=168.1946;InbreedingCoeff=0.9895;MQ=79.97;MQ0=5;MQRankSum=-14.602;QD=32.99;ReadPosRankSum=0.270;VQSLOD=3.7740;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,1:28:48.05:787,48,0	1/1:5,0:4:9.03:167,9,0	0/0:64,0:35:67.48:0,67,1085	0/0:76,0:40:72.44:0,72,1100	1/1:20,0:20:38.90:583,39,0	1/1:14,2:16:33.11:615,33,0	1/1:20,1:20:45.15:849,45,0	1/1:14,0:13:35.85:380,36,0	1/1:9,0:9:21.07:377,21,0	1/1:28,0:28:71.59:1101,72,0	1/1:11,2:13:21.03:389,21,0	1/1:20,0:20:39.07:647,39,0	0/0:19,0:19:53.86:0,54,1659	1/1:12,0:12:21.03:353,21,0	0/0:13,0:13:39.12:0,39,1145	0/0:22,0:22:66.23:0,66,2014	1/1:15,0:15:24.08:437,24,0	1/1:14,0:15:24.08:402,24,0	0/0:27,0:27:81.27:0,81,2287	0/0:21,0:21:63.19:0,63,1739	0/0:12,0:12:36.12:0,36,1235	1/1:15,0:15:36.12:637,36,0	0/0:26,0:26:78.23:0,78,2249	0/0:42,0:42:99:0,126,4058	1/1:17,0:17:30.02:493,30,0	0/0:22,0:22:66.23:0,66,2114	0/0:27,0:27:81.25:0,81,2325	0/0:9,0:9:27.09:0,27,931
chr10	89111515	.	TA	T	6402.94	PASS	AB=0.923;AC=31;AF=0.554;AN=56;BaseQRankSum=14.023;DP=496;FS=1.248;HRun=8;HaplotypeScore=74.8504;InbreedingCoeff=0.9205;MQ=56.24;MQ0=8;MQRankSum=1.874;QD=22.08;ReadPosRankSum=3.253;VQSLOD=5.2916;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:69.11:666,69,0	1/1:0,9:9:21.03:203,21,0	0/0:14,0:9:20.49:0,20,211	0/1:22,2:16:46.45:46,0,249	1/1:2,14:16:42.07:405,42,0	1/1:2,9:11:27.04:261,27,0	1/1:4,12:14:27.04:261,27,0	1/1:5,19:24:57.02:535,57,0	1/1:2,16:18:45.07:434,45,0	1/1:2,17:19:48.08:464,48,0	1/1:1,11:12:33.05:319,33,0	1/1:2,22:24:57.09:550,57,0	0/0:22,0:22:63.15:0,63,734	1/1:3,14:17:42.06:405,42,0	0/0:19,0:19:54.11:0,54,625	0/0:20,0:20:45.08:0,45,504	1/1:3,24:27:66.10:637,66,0	1/1:0,20:20:60.10:579,60,0	0/0:13,0:13:36.08:0,36,419	0/0:14,0:14:30.09:0,30,362	0/0:23,0:23:63.11:0,63,727	1/1:2,17:19:51.08:493,51,0	0/0:9,0:9:18.05:0,18,215	0/0:14,0:14:42.10:0,42,486	1/1:1,5:6:15.02:145,15,0	0/0:26,1:27:31.20:0,31,651	0/0:26,0:26:75.11:0,75,849	0/0:5,0:5:15.05:0,15,181
chr10	89111959	.	T	TG	2831.36	PASS	AC=28;AF=0.538;AN=52;BaseQRankSum=10.348;DP=202;FS=0.000;HRun=5;HaplotypeScore=34.6000;InbreedingCoeff=0.8623;MQ=67.40;MQ0=1;MQRankSum=1.378;QD=25.98;ReadPosRankSum=2.211;VQSLOD=2.3814;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,6:7:18.06:245,18,0	1/1:0,3:3:6.02:82,6,0	0/0:3,0:3:6:0,6,56	./.	1/1:2,6:8:21.07:274,21,0	1/1:2,9:11:21.07:287,21,0	1/1:2,4:6:16.30:207,16,0	1/1:0,10:10:30.10:410,30,0	1/1:1,7:8:12.04:164,12,0	1/1:1,4:5:12.04:164,12,0	1/1:1,5:6:9.03:123,9,0	1/1:2,12:14:24.08:326,24,0	0/0:15,0:15:42.08:0,42,451	1/1:2,9:11:21.05:263,21,0	0/0:5,0:5:8.45:0,8,94	0/0:4,0:4:11.25:0,11,109	1/1:2,7:9:12.04:164,12,0	1/1:1,2:3:6.02:82,6,0	0/0:12,0:12:33.09:0,33,366	0/0:5,0:5:12.03:0,12,136	0/0:14,0:14:30.08:0,30,336	1/1:1,7:8:18.06:246,18,0	0/0:3,0:3:6.02:0,6,68	0/0:7,0:7:20.55:0,21,213	./.	0/0:8,0:8:21.05:0,21,232	0/0:10,0:10:30.08:0,30,336	0/0:2,0:2:3.01:0,3,34
chr10	89113378	.	AT	A	5824.63	PASS	AB=0.840;AC=23;AF=0.411;AN=56;BaseQRankSum=14.872;DP=642;FS=0.655;HRun=10;HaplotypeScore=96.4147;InbreedingCoeff=0.9309;MQ=72.17;MQ0=0;MQRankSum=-1.316;QD=18.97;ReadPosRankSum=0.536;VQSLOD=5.0805;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:86.98:755,87,0	0/0:10,1:11:7.02:0,7,288	0/1:17,4:20:4.40:4,0,313	0/0:12,0:12:23.81:0,24,202	1/1:4,31:35:47.76:644,48,0	1/1:4,32:36:89.98:781,90,0	1/1:2,22:24:56.99:495,57,0	1/1:7,19:27:55.97:471,56,0	1/1:4,18:22:53.99:469,54,0	0/0:31,1:33:45.20:0,45,764	0/0:21,0:21:48.12:0,48,523	1/1:5,23:29:61.98:527,62,0	0/0:17,0:17:48.10:0,48,509	1/1:3,10:14:29.98:260,30,0	0/0:16,0:17:44.95:0,45,472	0/0:23,0:23:54.13:0,54,589	0/0:25,0:25:72.18:0,72,788	1/1:2,17:19:27.57:370,28,0	0/0:20,1:21:16.05:0,16,397	0/0:30,1:31:55.17:0,55,837	0/0:8,0:8:24.06:0,24,265	1/1:3,20:23:59.02:501,59,0	0/0:24,0:26:71.97:0,72,749	0/0:12,0:12:33.08:0,33,357	1/1:3,22:25:62.97:547,63,0	0/0:28,0:28:63.14:0,63,672	0/0:26,2:30:34.77:0,35,790	0/0:20,0:20:45.12:0,45,498
chr10	89114043	.	GA	G	5787.72	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=11.636;DP=614;FS=0.671;HRun=7;HaplotypeScore=120.6196;InbreedingCoeff=0.9930;MQ=69.00;MQ0=1;MQRankSum=-7.653;QD=25.95;ReadPosRankSum=-0.077;VQSLOD=3.5996;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:28:72.11:718,72,0	0/0:1,0:5:14.33:0,14,78	0/0:26,0:20:21.20:0,21,327	0/0:33,1:25:13.30:0,13,462	1/1:2,14:16:36.08:366,36,0	1/1:0,19:19:48.11:490,48,0	1/1:1,36:37:99:1010,99,0	1/1:4,12:16:39.08:398,39,0	1/1:2,19:21:60.14:612,60,0	0/0:2,0:20:51.27:0,51,260	0/0:2,0:18:45.51:0,46,229	1/1:2,17:19:51.11:519,51,0	0/0:24,0:24:66.20:0,66,817	1/1:3,15:18:51.11:520,51,0	0/0:20,0:20:60.19:0,60,755	0/0:28,0:28:84.27:0,84,1051	0/0:1,0:22:56.82:0,57,290	1/1:2,12:14:33.07:337,33,0	0/0:25,0:25:69.20:0,69,835	0/0:27,0:27:75.23:0,75,928	0/0:26,0:26:78.25:0,78,980	1/1:4,20:24:57.12:581,57,0	0/0:29,0:29:81.24:0,81,993	0/0:34,0:34:99:0,102,1283	1/1:2,9:11:24.04:239,24,0	0/0:22,0:23:69.08:0,69,833	0/0:18,0:18:54.17:0,54,679	0/0:11,0:11:33.11:0,33,415
chr10	89114064	.	AAGG	A	9470.74	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=17.573;DP=668;FS=5.607;HRun=0;HaplotypeScore=137.1988;InbreedingCoeff=0.9187;MQ=54.33;MQ0=4;MQRankSum=-12.134;QD=27.29;ReadPosRankSum=-0.421;VQSLOD=4.8850;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,20:29:48.16:710,48,0	1/1:1,6:7:18.06:266,18,0	0/0:29,0:15:9.60:0,10,463	0/1:38,0:21:24.49:24,0,403	1/1:5,16:21:36.05:440,36,0	1/1:9,13:22:51.16:733,51,0	1/1:8,20:28:72.23:1038,72,0	1/1:5,12:17:36.12:516,36,0	1/1:8,23:31:54.16:759,54,0	1/1:6,16:22:57.16:792,57,0	1/1:5,17:22:54.14:755,54,0	1/1:3,20:23:60.20:887,60,0	0/0:24,0:24:60.21:0,60,1210	1/1:5,12:17:36.11:514,36,0	0/0:27,0:27:63.19:0,63,1234	0/0:27,0:27:72.21:0,72,1385	1/1:11,8:19:24.08:356,24,0	1/1:7,7:14:21.06:283,21,0	0/0:26,0:25:42.13:0,42,803	0/0:30,0:30:75.26:0,75,1514	0/0:25,0:25:60.15:0,60,1105	1/1:6,19:25:63.20:909,63,0	0/0:33,0:33:93.30:0,93,1873	0/0:40,0:40:99:0,108,2103	1/1:1,11:12:33.11:488,33,0	0/0:26,0:26:66.23:0,66,1331	0/0:21,0:21:48.15:0,48,903	0/0:12,0:12:33.06:0,33,607
chr10	89114117	.	GAGA	G	2808.48	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.090;DP=692;FS=7.519;HRun=0;HaplotypeScore=129.4842;InbreedingCoeff=0.9971;MQ=73.07;MQ0=1;MQRankSum=-3.434;QD=36.47;ReadPosRankSum=1.492;VQSLOD=4.3563;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:57.13:0,57,1236	1/1:1,8:9:18.06:306,18,0	0/0:32,0:29:73.71:0,74,1487	0/0:34,0:31:68.42:0,68,1476	0/0:18,0:18:48.16:0,48,1069	0/0:21,0:21:63.21:0,63,1394	0/0:26,0:26:78.27:0,78,1755	0/0:30,0:30:78.23:0,78,1527	0/0:29,0:29:63.14:0,63,1299	1/1:3,28:31:87.28:1438,87,0	1/1:2,15:17:36.04:562,36,0	0/0:26,0:26:72.19:0,72,1556	0/0:22,0:22:66.12:0,66,1332	0/0:23,0:23:60.19:0,60,1336	0/0:29,0:29:84.27:0,84,1821	0/0:25,0:25:72.24:0,72,1557	1/1:0,20:20:39.13:662,39,0	0/0:14,0:14:39.02:0,39,661	0/0:25,0:25:64.98:0,65,1351	0/0:21,0:21:63.22:0,63,1450	0/0:36,0:36:99:0,102,2170	0/0:22,0:22:63.02:0,63,1150	0/0:25,0:25:70.14:0,70,1576	0/0:47,0:46:99:0,135,2778	0/0:19,0:19:51.14:0,51,1048	0/0:24,1:25:24.10:0,24,1509	0/0:22,0:22:63.22:0,63,1433	0/0:19,0:19:57.17:0,57,1265
chr10	89114394	.	CT	C	2017.78	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.440;DP=605;FS=2.416;HRun=2;HaplotypeScore=67.9504;InbreedingCoeff=0.9973;MQ=86.96;MQ0=0;MQRankSum=-3.115;QD=29.67;ReadPosRankSum=1.454;VQSLOD=3.3644;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,108,1575	1/1:0,6:6:18.06:233,18,0	0/0:17,0:17:51.16:0,51,740	0/0:25,0:25:65.48:0,65,838	0/0:13,0:13:33.11:0,33,483	0/0:26,0:26:75.19:0,75,1075	0/0:18,0:18:54.15:0,54,767	0/0:34,0:34:93.30:0,93,1352	0/0:21,0:21:63.20:0,63,924	1/1:2,12:14:36.12:466,36,0	1/1:0,14:14:30.10:388,30,0	0/0:21,0:21:63.21:0,63,941	0/0:24,0:24:72.23:0,72,1039	0/0:26,0:26:78.26:0,78,1168	0/0:25,0:25:75.25:0,75,1119	0/0:29,0:29:81.26:0,81,1192	1/1:1,33:34:84.27:1090,84,0	0/0:32,0:32:96.31:0,96,1412	0/0:12,0:12:36.10:0,36,485	0/0:12,0:12:36.11:0,36,517	0/0:25,0:25:72.24:0,72,1071	0/0:11,0:11:30.10:0,30,448	0/0:15,0:15:42.14:0,42,626	0/0:22,0:22:66.16:0,66,907	0/0:21,0:21:60.19:0,60,877	0/0:23,0:23:66.21:0,66,942	0/0:22,0:22:66.21:0,66,969	0/0:23,0:23:66.21:0,66,967
chr10	89117418	.	G	GA	1534.05	PASS	AB=0.794;AC=8;AF=0.143;AN=56;BaseQRankSum=-7.952;DP=608;FS=6.505;HRun=10;HaplotypeScore=65.4231;InbreedingCoeff=0.7890;MQ=77.38;MQ0=1;MQRankSum=0.414;QD=15.65;ReadPosRankSum=1.499;VQSLOD=4.0641;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,168,1364	1/1:4,9:13:21.24:224,21,0	0/0:19,0:20:27.63:0,28,254	0/0:16,0:15:12.38:0,12,94	0/0:22,0:22:53.92:0,54,443	0/0:20,0:20:53.92:0,54,442	0/0:34,0:34:89.75:0,90,724	0/0:20,1:21:13.77:0,14,286	0/0:16,0:16:38.94:0,39,320	1/1:5,10:15:7.80:272,8,0	0/1:6,7:13:0.62:188,0,1	0/0:24,1:25:36.92:0,37,507	0/0:15,1:16:12.87:0,13,299	0/0:16,0:17:40.93:0,41,319	0/0:21,0:22:52.93:0,53,419	0/0:16,0:16:41.94:0,42,345	1/1:5,37:42:93.23:991,93,0	0/0:30,0:30:74.85:0,75,610	0/0:16,0:16:32.94:0,33,271	0/0:20,0:22:46.92:0,47,368	0/0:26,0:26:68.87:0,69,562	0/0:16,0:16:32.95:0,33,271	0/0:18,0:18:35.93:0,36,295	0/0:22,2:24:24.90:0,25,404	0/1:13,1:15:2.05:2,0,192	0/0:20,0:20:44.86:0,45,363	0/0:26,1:27:48.92:0,49,608	0/0:7,0:7:20.98:0,21,172
chr10	89117647	.	GTTGTTTTGTT	G	8602.86	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.413;DP=744;FS=3.516;HRun=0;HaplotypeScore=198.6028;InbreedingCoeff=0.9928;MQ=65.25;MQ0=4;MQRankSum=-9.376;QD=38.75;ReadPosRankSum=0.973;VQSLOD=4.7341;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,114,4797	0/0:10,0:10:21.07:0,21,824	0/0:51,0:26:42.03:0,42,882	0/0:50,0:36:54.15:0,54,1452	1/1:4,22:26:57.19:1426,57,0	1/1:5,19:24:27.09:835,27,0	1/1:7,22:29:27.09:814,27,0	1/1:8,18:26:54.16:1157,54,0	0/0:17,0:17:45.15:0,45,1889	0/0:23,0:23:51.17:0,51,2159	0/0:19,0:19:54.19:0,54,2510	1/1:3,20:23:36.12:1096,36,0	0/0:11,0:11:33.11:0,33,1372	1/1:2,20:22:33.11:1020,33,0	0/0:18,0:18:51.15:0,51,2158	0/0:21,0:21:54.18:0,54,2310	0/0:45,0:45:99:0,112,5175	1/1:3,20:23:12.04:366,12,0	0/0:24,0:23:51.16:0,51,1761	0/0:27,0:27:63.22:0,63,2871	0/0:32,0:31:72.25:0,72,3118	1/1:6,17:23:33:797,33,0	0/0:23,0:23:59.99:0,60,2579	0/0:28,0:28:72.25:0,72,3070	1/1:4,22:26:36.12:1091,36,0	0/0:35,0:35:87.30:0,87,4000	0/0:34,0:34:96.30:0,96,3956	0/0:7,0:7:18.06:0,18,626
chr10	89118810	.	T	TC	7095.12	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=17.509;DP=641;FS=0.318;HRun=3;HaplotypeScore=117.7056;InbreedingCoeff=0.7334;MQ=69.49;MQ0=1;MQRankSum=-6.771;QD=20.93;ReadPosRankSum=3.103;VQSLOD=4.2361;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:33:61.14:703,61,0	0/1:13,0:13:36.92:37,0,47	0/0:15,0:14:15.21:0,15,295	0/0:17,0:17:41.87:0,42,432	1/1:6,26:33:80.81:936,81,0	1/1:3,20:23:51.16:631,51,0	1/1:6,24:30:66.14:788,66,0	1/1:3,11:15:35.97:380,36,0	1/1:2,21:24:60.14:728,60,0	0/1:24,0:24:22.92:31,0,23	0/1:17,0:17:36.34:70,0,36	1/1:1,16:18:48.03:562,48,0	0/0:19,0:19:51.12:0,51,578	1/1:3,17:20:48.15:594,48,0	0/0:25,0:24:69.07:0,69,744	0/0:28,0:28:78.16:0,78,854	0/1:28,0:28:3.56:79,0,4	1/1:3,21:24:56.66:642,57,0	0/0:32,0:32:90.19:0,90,999	0/0:28,0:28:69.15:0,69,769	0/0:31,0:31:84.11:0,84,916	1/1:4,16:22:46.58:522,47,0	0/0:15,0:14:40.31:0,40,426	0/0:31,0:31:81.57:0,82,986	1/1:0,13:14:33.05:391,33,0	0/0:23,0:23:65.73:0,66,703	0/0:27,0:27:72.15:0,72,812	0/0:10,0:10:30.07:0,30,345
chr10	89118813	.	C	CA	3989.46	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=14.707;DP=610;FS=1.933;HRun=10;HaplotypeScore=122.5884;InbreedingCoeff=0.9426;MQ=71.17;MQ0=1;MQRankSum=-3.974;QD=12.16;ReadPosRankSum=1.418;VQSLOD=3.0122;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:31:32.34:234,32,0	1/1:2,10:12:21.05:224,21,0	0/0:15,0:15:13.31:0,13,165	0/1:18,0:18:1.38:1,0,183	1/1:28,0:28:70.06:362,70,0	1/1:20,0:20:45.16:191,45,0	1/1:26,0:25:50.30:232,50,0	1/1:14,0:14:13.26:84,13,0	1/1:23,0:23:47.92:231,48,0	1/1:3,19:22:49.26:588,49,0	1/1:6,13:19:42.08:436,42,0	1/1:17,0:17:40.23:184,40,0	0/0:18,0:18:41.95:0,42,345	1/1:17,0:17:43.43:203,43,0	0/0:23,0:23:47.93:0,48,394	0/0:27,0:27:53.92:0,54,443	1/1:4,22:26:54.14:576,54,0	1/1:21,0:21:35.14:175,35,0	0/0:30,0:31:76.93:0,77,621	0/0:25,0:25:43:0,43,430	0/0:29,0:31:72.97:0,73,576	1/1:20,0:20:12.66:137,13,0	0/0:17,0:17:11.64:0,12,243	0/0:31,1:33:56.91:0,57,656	1/1:14,0:14:27.35:132,27,0	0/0:23,0:23:56.73:0,57,456	0/0:24,0:25:64.95:0,65,523	0/0:9,0:10:29.01:0,29,228
chr10	89118982	.	AG	A	4569.24	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.381;DP=605;FS=3.157;HRun=2;HaplotypeScore=81.6648;InbreedingCoeff=0.9810;MQ=66.67;MQ0=11;MQRankSum=0.181;QD=29.67;ReadPosRankSum=3.606;VQSLOD=4.5926;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,46:47:99:1481,120,0	1/1:3,1:4:8.23:76,8,0	0/0:19,0:13:35.38:0,35,362	0/0:17,0:11:29.94:0,30,402	0/0:24,0:23:66.16:0,66,894	0/0:17,0:17:51.16:0,51,734	0/0:22,0:21:60.12:0,60,805	0/0:27,0:26:78.19:0,78,1075	1/1:4,15:18:48.12:574,48,0	1/1:12,14:24:63.90:659,64,0	1/1:2,12:14:42.05:488,42,0	0/0:19,0:19:57.10:0,57,778	0/0:12,0:12:36.11:0,36,514	0/0:19,0:19:57.12:0,57,775	0/0:25,0:25:75.23:0,75,1070	0/0:19,0:19:57.19:0,57,841	1/1:2,42:44:76.23:1292,76,0	0/0:31,0:30:86.90:0,87,1144	0/0:33,0:32:93.23:0,93,1284	0/0:7,0:7:18.05:0,18,248	0/0:24,0:24:66.21:0,66,953	0/0:21,0:21:63.09:0,63,830	0/0:13,0:13:38.85:0,39,523	0/0:46,0:44:99:0,127,1785	0/0:6,0:6:15.04:0,15,201	0/0:18,0:18:54.16:0,54,762	0/0:17,0:17:48.11:0,48,629	0/0:15,0:15:45.08:0,45,605
chr10	89119293	.	TCACA	T	224.59	PASS	AB=0.833;AC=13;AF=0.325;AN=40;BaseQRankSum=2.732;DP=243;FS=1.423;HRun=0;HaplotypeScore=46.7174;InbreedingCoeff=0.3229;MQ=59.63;MQ0=14;MQRankSum=-0.162;QD=3.62;ReadPosRankSum=0.930;VQSLOD=1.0010;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:19:3:28,3,0	./.	./.	./.	0/0:4,0:4:3.22:0,3,13	0/0:6,0:6:8.99:0,9,87	0/0:12,0:11:3.22:0,3,13	0/0:26,0:26:2.80:0,3,13	./.	0/0:5,0:5:2.68:0,3,11	./.	0/0:4,0:7:2.66:0,3,12	0/0:2,0:1:3.01:0,3,65	1/1:4,1:5:3.01:46,3,0	./.	1/1:2,0:3:3:28,3,0	1/1:14,0:14:6:52,6,0	0/1:12,3:15:40.31:161,0,40	0/0:7,0:7:3.01:0,3,40	0/0:7,0:7:3.01:0,3,70	0/0:20,0:20:11.82:0,12,200	1/1:3,0:3:2.99:24,3,0	1/1:2,0:2:0.47:1,0,0	./.	./.	0/0:3,0:3:3.01:0,3,49	0/0:2,0:2:0.47:0,0,1	0/0:17,0:16:30.09:0,30,617
chr10	89119349	.	ACACGT	A	144.09	PASS	AB=1.000;AC=5;AF=0.100;AN=50;BaseQRankSum=4.237;DP=224;FS=9.653;HRun=0;HaplotypeScore=47.0929;InbreedingCoeff=0.4880;MQ=46.09;MQ0=23;MQRankSum=-3.123;QD=11.08;ReadPosRankSum=2.059;VQSLOD=0.5001;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:5:34.14:34,0,38	1/1:0,1:1:3.01:35,3,0	0/0:18,0:4:12.04:0,12,384	0/0:15,0:3:9.03:0,9,228	0/0:6,0:6:14.97:0,15,398	0/0:7,0:6:18:0,18,383	0/0:6,0:5:14.37:0,14,260	0/0:27,0:24:65.50:0,65,1693	./.	./.	./.	0/0:10,0:10:14.75:0,15,437	0/0:8,0:8:24.07:0,24,596	0/0:5,0:4:11.71:0,12,225	0/0:6,0:4:9.03:0,9,270	0/0:3,0:2:6.02:0,6,142	1/1:4,3:7:17.22:188,17,0	0/0:14,0:14:36.09:0,36,589	0/0:15,0:13:35.75:0,36,872	0/0:7,0:7:10.85:0,11,294	0/0:11,0:11:24.07:0,24,655	0/0:6,0:6:14.57:0,15,495	0/0:7,0:6:9.03:0,9,286	0/0:4,0:4:9.03:0,9,289	0/0:6,0:4:6.49:0,6,193	0/0:5,0:4:12.04:0,12,261	0/0:4,0:3:9.03:0,9,288	0/0:20,0:20:60.18:0,60,1821
chr10	89119354	.	T	TTAAA	1906.79	PASS	AB=1.000;AC=20;AF=0.500;AN=40;BaseQRankSum=3.573;DP=221;FS=2.241;HRun=0;HaplotypeScore=46.4764;InbreedingCoeff=0.5869;MQ=46.30;MQ0=18;MQRankSum=-4.405;QD=18.16;ReadPosRankSum=-3.688;VQSLOD=2.4730;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:9:0.47:1,0,0	1/1:1,0:1:3.01:70,3,0	./.	./.	1/1:5,1:6:3.01:70,3,0	1/1:4,2:5:6.02:141,6,0	./.	1/1:36,0:34:51.10:813,51,0	./.	./.	./.	1/1:5,1:6:3.01:70,3,0	0/0:8,0:8:12.04:0,12,185	1/1:2,1:4:3.01:70,3,0	0/0:6,0:4:3.01:0,3,46	./.	1/1:13,0:13:21.44:315,21,0	1/1:7,7:14:21.07:493,21,0	0/0:12,0:10:15.05:0,15,232	0/1:4,0:4:0:0,0,0	0/0:8,0:8:6.02:0,6,93	0/1:6,0:6:0:0,0,0	./.	0/0:4,0:4:6.02:0,6,93	0/0:5,0:4:6.01:0,6,93	0/0:4,0:4:3.01:0,3,46	0/0:4,0:3:6.02:0,6,93	0/0:19,0:19:18.06:0,18,278
chr10	89119453	.	TG	T	1882.23	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=2.901;DP=313;FS=0.000;HRun=2;HaplotypeScore=35.2721;InbreedingCoeff=0.9184;MQ=93.39;MQ0=0;MQRankSum=-3.039;QD=31.37;ReadPosRankSum=2.289;VQSLOD=3.0526;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:33.11:428,33,0	1/1:0,3:3:9.03:117,9,0	0/0:11,0:11:27.09:0,27,399	0/0:17,0:17:41.43:0,41,626	0/0:2,0:2:6.02:0,6,90	0/0:14,0:14:39.12:0,39,562	0/0:11,0:11:33.10:0,33,476	0/0:38,0:38:99:0,108,1535	1/1:0,11:11:30.10:389,30,0	1/1:0,4:4:12.04:156,12,0	1/1:0,5:5:12.04:156,12,0	0/0:10,0:10:30.08:0,30,427	0/0:8,0:8:24.08:0,24,353	0/0:10,0:10:30.10:0,30,449	0/0:7,0:7:21.06:0,21,295	0/0:6,0:6:18.06:0,18,268	1/1:2,22:24:63.20:817,63,0	0/0:25,0:25:75.17:0,75,1095	0/0:10,0:10:30.10:0,30,449	0/0:8,0:8:24.08:0,24,359	0/0:16,0:16:48.15:0,48,699	0/0:2,0:2:6.02:0,6,90	0/0:11,0:11:33.11:0,33,493	0/0:10,0:10:30.10:0,30,448	0/0:3,0:3:9.03:0,9,135	0/0:10,0:10:30.10:0,30,450	0/0:8,0:8:24.08:0,24,359	0/0:16,0:16:45.15:0,45,672
chr10	89119725	.	T	TC	553.25	PASS	AB=0.843;AC=17;AF=0.405;AN=42;BaseQRankSum=2.951;DP=145;FS=0.893;HRun=0;HaplotypeScore=34.0428;InbreedingCoeff=0.6276;MQ=93.56;MQ0=0;MQRankSum=-1.495;QD=8.78;ReadPosRankSum=-2.930;VQSLOD=2.8118;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,11:14:32.74:296,33,0	./.	0/1:15,0:13:0.56:1,0,104	0/0:8,0:7:11.51:0,12,99	1/1:1,0:1:2.97:20,3,0	./.	1/1:4,0:4:5.93:40,6,0	1/1:3,0:3:5.93:40,6,0	1/1:4,1:5:14.97:129,15,0	0/1:3,0:3:0:0,0,0	./.	./.	0/0:7,0:7:15.05:0,15,208	1/1:5,0:5:6.34:44,6,0	0/0:8,0:8:20.98:0,21,247	0/0:3,0:3:9.03:0,9,125	0/1:1,0:9:6.99:59,0,7	1/1:2,2:4:5.49:75,5,0	./.	0/0:2,0:2:3:0,3,25	0/0:15,0:16:48.06:0,48,576	./.	0/0:4,0:4:12.03:0,12,152	0/0:13,0:13:38.84:0,39,454	./.	0/0:3,0:3:6:0,6,54	0/0:10,0:10:30.05:0,30,374	0/0:5,0:5:15.05:0,15,208
chr10	89119729	.	G	GGA	302.79	PASS	AB=0.714;AC=5;AF=0.114;AN=44;BaseQRankSum=4.320;DP=143;FS=1.067;HRun=0;HaplotypeScore=32.2018;InbreedingCoeff=0.3920;MQ=93.67;MQ0=0;MQRankSum=-2.522;QD=11.65;ReadPosRankSum=1.246;VQSLOD=3.1841;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,11:14:23.22:295,23,0	./.	0/0:14,0:13:7.43:0,7,173	0/0:9,0:7:13.73:0,14,121	./.	0/0:1,0:1:2.97:0,3,20	0/0:4,0:4:3.89:0,4,27	0/0:4,0:4:11.97:0,12,99	0/1:3,2:5:14.93:87,0,15	0/0:2,0:2:3.01:0,3,30	./.	./.	0/0:8,0:8:23.98:0,24,291	0/0:4,0:4:3.27:0,3,24	0/0:7,0:7:18.06:0,18,260	0/0:3,0:3:9.03:0,9,136	1/1:7,0:7:6.73:33,7,0	0/0:3,0:3:1.77:0,2,5	0/0:1,0:1:3.01:0,3,43	0/0:3,0:3:9.01:0,9,97	0/0:16,0:16:38.65:0,39,528	./.	0/0:4,0:4:12.04:0,12,181	0/0:13,0:13:36.03:0,36,474	./.	0/0:1,0:1:3:0,3,27	0/0:10,0:10:30.09:0,30,427	0/0:5,0:5:15.05:0,15,227
chr10	89121424	.	GGACT	G	13704.24	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=19.007;DP=698;FS=1.260;HRun=0;HaplotypeScore=178.7781;InbreedingCoeff=0.9974;MQ=60.19;MQ0=0;MQRankSum=-18.858;QD=51.14;ReadPosRankSum=-1.452;VQSLOD=5.0986;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,36:42:93.71:1701,94,0	0/0:5,0:5:15.05:0,15,409	0/0:23,0:19:52.69:0,53,1216	0/0:25,0:22:56.56:0,57,1590	1/1:2,8:10:30.10:577,30,0	1/1:2,19:21:60.19:1122,60,0	1/1:6,20:26:78.10:1326,78,0	1/1:11,26:37:99:1803,105,0	1/1:3,37:40:99:2167,120,0	0/0:38,0:38:99:0,114,3142	0/0:10,0:10:30.09:0,30,762	1/1:1,27:28:84.29:1606,84,0	0/0:23,0:23:69.20:0,69,1804	1/1:2,21:23:69.15:1248,69,0	0/0:38,0:38:99:0,114,3060	0/0:29,1:30:32.21:0,32,2293	0/0:34,0:34:99:0,102,2731	1/1:2,10:12:33.11:653,33,0	0/0:21,0:20:57.20:0,57,1586	0/0:19,0:19:57.14:0,57,1428	0/0:37,0:37:99:0,108,2877	1/1:1,16:17:48.07:859,48,0	0/0:32,0:32:93.32:0,93,2581	0/0:39,0:39:99:0,114,3085	1/1:2,10:11:36.04:643,36,0	0/0:26,0:26:75.26:0,75,2071	0/0:19,0:19:57.20:0,57,1584	0/0:11,0:11:33.07:0,33,751
chr10	89121433	.	TAC	T	10903.79	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=21.234;DP=693;FS=0.599;HRun=0;HaplotypeScore=163.9515;InbreedingCoeff=0.9970;MQ=54.29;MQ0=2;MQRankSum=-19.616;QD=41.62;ReadPosRankSum=-1.779;VQSLOD=5.0365;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,41:42:99:1516,105,0	0/0:5,0:5:15.05:0,15,290	0/0:22,0:16:48.16:0,48,896	0/0:29,0:25:63.22:0,63,1212	1/1:0,11:11:33.11:475,33,0	1/1:0,21:21:63.21:936,63,0	1/1:0,23:23:69.23:1004,69,0	1/1:0,34:34:99:1463,102,0	1/1:0,40:40:99:1660,117,0	0/0:39,0:39:99:0,117,2222	0/0:8,0:8:24.08:0,24,462	1/1:0,27:27:81.27:1201,81,0	0/0:23,0:23:69.19:0,69,1263	1/1:0,22:22:65.89:922,66,0	0/0:36,0:36:99:0,108,2052	0/0:33,1:34:58.11:0,58,1859	0/0:35,0:35:99:0,105,2028	1/1:2,12:14:39.13:603,39,0	0/0:23,0:22:60.19:0,60,1102	0/0:14,0:14:42.14:0,42,809	0/0:35,0:35:99:0,102,1960	1/1:0,18:18:47.65:678,48,0	0/0:30,0:30:87.30:0,87,1668	0/0:42,0:42:99:0,123,2363	1/1:0,10:10:30.10:447,30,0	0/0:27,0:27:81.26:0,81,1531	0/0:21,0:21:63.22:0,63,1217	0/0:8,0:8:24.08:0,24,463
chr10	89121836	.	CT	C	854.65	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.543;DP=278;FS=72.884;HRun=2;HaplotypeScore=48.1503;InbreedingCoeff=0.7770;MQ=71.38;MQ0=17;MQRankSum=-2.752;QD=18.18;ReadPosRankSum=1.131;VQSLOD=-0.1081;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,23:26:53.94:599,54,0	1/1:1,3:4:11.62:117,12,0	0/0:23,0:9:1.38:0,1,270	0/0:30,0:15:23.44:0,23,245	0/0:3,0:3:9.03:0,9,135	0/0:10,0:9:21.07:0,21,313	0/0:29,0:28:75.19:0,75,1051	0/0:12,0:12:36.12:0,36,537	1/1:1,4:4:11.99:125,12,0	1/1:3,0:2:5.69:41,6,0	0/0:2,0:2:0:0,0,0	0/0:11,0:11:22.89:0,23,318	0/0:2,0:2:3.01:0,3,45	0/0:9,0:9:24.07:0,24,341	0/0:8,0:8:24.07:0,24,339	0/0:2,0:2:6.02:0,6,90	1/1:1,5:5:12.02:130,12,0	0/0:6,0:6:18.06:0,18,269	0/0:10,0:9:23.28:0,23,303	0/0:5,0:4:12.03:0,12,161	0/0:16,1:16:38.64:0,39,555	0/0:8,0:8:21.07:0,21,309	0/0:3,0:3:9.03:0,9,135	0/0:12,0:11:29.58:0,30,413	0/0:7,0:7:18.06:0,18,269	0/0:7,0:6:18.03:0,18,230	0/0:6,0:6:18.06:0,18,269	0/0:9,0:7:17.99:0,18,241
chr10	89122038	.	GAGGGAGGGAGGGAGGGAGGAAGGAAGGAAGGA	G	640.43	PASS	AC=4;AF=0.087;AN=46;BaseQRankSum=3.189;DP=135;FS=2.434;HRun=0;HaplotypeScore=101.3141;InbreedingCoeff=0.3586;MQ=52.84;MQ0=5;MQRankSum=-2.943;QD=22.08;ReadPosRankSum=2.758;VQSLOD=1.8388;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:6.13:483,6,0	./.	./.	0/0:2,0:1:2.96:0,3,19	0/0:4,0:4:9.03:0,9,643	0/0:2,0:2:6.02:0,6,358	0/0:12,0:12:27.03:0,27,1296	0/0:8,0:5:10.27:0,10,191	1/1:0,13:13:3.01:252,3,0	0/0:6,0:5:12.04:0,12,825	0/0:7,0:6:18.06:0,18,921	0/0:1,0:1:3.01:0,3,289	0/0:2,0:2:3.01:0,3,325	0/0:6,0:6:16.27:0,16,725	0/0:2,0:2:6.02:0,6,567	0/0:1,0:1:3.01:0,3,100	0/0:15,0:15:36.06:0,36,1151	0/0:3,0:3:9.03:0,9,306	./.	0/0:2,0:1:3.01:0,3,229	0/0:11,0:10:19.31:0,19,1328	0/0:3,0:3:9.03:0,9,743	0/0:3,0:3:5.05:0,5,192	0/0:5,0:5:15.03:0,15,734	0/0:6,0:6:18.06:0,18,1815	./.	0/0:2,0:2:6.02:0,6,304	./.
chr10	89122492	.	TAAAG	T	1268.03	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=8.266;DP=507;FS=1.636;HRun=0;HaplotypeScore=89.5092;InbreedingCoeff=0.8428;MQ=70.62;MQ0=0;MQRankSum=-6.944;QD=24.39;ReadPosRankSum=-1.680;VQSLOD=3.2792;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:25:48:901,48,0	0/0:11,0:11:33.11:0,33,896	0/1:14,0:13:2.73:3,0,658	0/0:15,0:15:23.02:0,23,579	0/0:21,0:21:63.22:0,63,1711	0/0:16,0:16:39.13:0,39,1012	0/0:18,0:18:45.15:0,45,1221	0/0:37,0:37:99:0,102,2610	1/1:2,9:11:27.08:488,27,0	0/0:29,0:29:81.28:0,81,2214	0/0:20,0:20:57.20:0,57,1553	0/0:18,0:18:54.19:0,54,1447	0/0:16,0:16:48.16:0,48,1280	0/0:9,0:9:27.09:0,27,707	0/0:16,0:16:45.15:0,45,1233	0/0:12,0:12:27.09:0,27,729	0/0:34,0:34:99:0,102,2720	0/0:9,0:9:21.07:0,21,574	0/0:12,0:12:33.11:0,33,904	0/0:21,0:21:57.18:0,57,1473	0/0:16,0:16:45.13:0,45,1129	0/0:12,0:12:30.10:0,30,822	0/0:21,0:21:63.20:0,63,1670	0/0:18,0:18:51.16:0,51,1301	0/0:16,0:16:48.16:0,48,1315	0/0:16,0:16:45.15:0,45,1206	0/0:21,0:21:57.20:0,57,1537	0/0:21,0:21:63.22:0,63,1673
chr10	89122544	.	AC	A	744.85	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=8.004;DP=428;FS=12.078;HRun=3;HaplotypeScore=57.5759;InbreedingCoeff=0.9059;MQ=54.53;MQ0=11;MQRankSum=-7.495;QD=24.03;ReadPosRankSum=-3.213;VQSLOD=1.4130;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:20:57.05:641,57,0	0/0:14,0:14:39.11:0,39,542	0/0:1,0:1:3.01:0,3,43	./.	0/0:23,0:23:60.20:0,60,855	0/0:17,0:17:48.16:0,48,690	0/0:12,0:12:36.12:0,36,515	0/0:27,0:21:57.19:0,57,818	1/1:0,7:6:18.06:222,18,0	0/0:20,0:18:57.18:0,57,803	0/0:24,0:24:72.22:0,72,1004	0/0:12,0:12:33.11:0,33,474	0/0:7,0:7:21.07:0,21,302	0/0:9,0:9:24.08:0,24,345	0/0:13,0:13:39.13:0,39,561	0/0:13,0:13:33.11:0,33,475	0/0:34,0:34:99:0,102,1404	0/0:14,0:14:33.11:0,33,475	0/0:8,0:8:24.08:0,24,340	0/0:29,0:29:75.25:0,75,1076	0/0:11,0:11:27.08:0,27,364	0/0:9,0:9:24.08:0,24,345	0/0:21,0:20:57.17:0,57,801	0/0:8,0:8:24.08:0,24,345	0/0:19,0:19:51.03:0,51,713	0/0:15,0:15:42.14:0,42,596	0/0:13,0:12:39.13:0,39,561	0/0:18,0:17:51.17:0,51,734
chr10	89122672	.	TTGTGTGTG	T	1044.45	PASS	AB=0.783;AC=23;AF=0.479;AN=48;BaseQRankSum=5.044;DP=459;FS=3.876;HRun=0;HaplotypeScore=118.2094;InbreedingCoeff=0.5574;MQ=62.39;MQ0=17;MQRankSum=-5.602;QD=4.86;ReadPosRankSum=0.144;VQSLOD=1.5086;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:5,0:5:3.01:56,3,0	./.	./.	1/1:8,6:14:2.96:20,3,0	0/1:12,4:15:12.35:189,0,12	1/1:15,0:15:3.01:47,3,0	./.	1/1:6,0:10:2.87:15,3,0	1/1:11,0:17:2.66:55,3,0	0/1:13,0:21:0:0,0,0	1/1:14,6:19:3.01:56,3,0	0/0:15,0:14:21.05:0,21,648	1/1:10,5:14:5.91:208,6,0	0/0:10,0:10:20.62:0,21,495	0/0:10,0:10:21.04:0,21,476	1/1:9,0:16:6.02:112,6,0	0/1:15,4:17:54.68:68,0,55	0/0:14,0:13:18.06:0,18,323	0/0:11,0:11:24.07:0,24,410	0/0:27,0:23:27.06:0,27,529	1/1:10,5:15:6.02:123,6,0	0/0:11,0:11:12.02:0,12,259	0/0:13,0:13:11.83:0,12,150	1/1:18,9:27:12.04:257,12,0	0/0:24,0:24:27.09:0,27,425	0/0:19,0:19:33.09:0,33,832	0/0:9,0:9:11.53:0,12,292
chr10	89123437	.	T	TGGTGA	6716.47	PASS	AB=0.941;AC=9;AF=0.161;AN=56;BaseQRankSum=1.245;DP=762;FS=2.686;HRun=0;HaplotypeScore=177.1174;InbreedingCoeff=0.8673;MQ=85.48;MQ0=0;MQRankSum=-12.280;QD=54.61;ReadPosRankSum=0.254;VQSLOD=5.1438;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,157,3320	1/1:1,11:12:27.09:843,27,0	0/0:28,0:28:78.27:0,78,1648	0/0:24,0:24:69.23:0,69,1377	0/0:35,0:35:99:0,102,2093	0/0:24,0:24:69.24:0,69,1471	0/0:25,0:25:75.26:0,75,1584	0/0:34,0:34:90.31:0,90,1873	0/0:26,0:26:72.23:0,72,1496	1/1:3,27:30:87.30:2620,87,0	1/1:5,17:22:48.16:1472,48,0	0/0:23,0:23:69.24:0,69,1418	0/0:20,0:20:57.18:0,57,1176	0/0:27,0:27:75.26:0,75,1584	0/0:29,0:29:84.27:0,84,1709	0/0:23,0:23:66.21:0,66,1365	1/1:5,18:27:54.19:1687,54,0	0/0:14,0:14:39.13:0,39,795	0/0:12,0:12:36.12:0,36,766	0/0:32,0:32:90.31:0,90,1919	0/0:33,0:33:96.33:0,96,2047	0/0:29,0:29:84.29:0,84,1790	0/0:27,0:27:78.27:0,78,1651	0/0:35,0:34:93.26:0,93,1830	0/0:27,0:27:78.27:0,78,1663	0/1:30,2:32:94.30:94,0,1701	0/0:45,0:45:99:0,132,2779	0/0:13,0:13:36.12:0,36,768
chr10	89124563	.	A	AT	6081.06	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=3.916;DP=721;FS=0.315;HRun=9;HaplotypeScore=97.0653;InbreedingCoeff=0.9757;MQ=71.93;MQ0=0;MQRankSum=-2.056;QD=25.88;ReadPosRankSum=-1.491;VQSLOD=4.1296;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:89.95:0,90,776	0/0:16,0:16:47.95:0,48,407	0/0:11,0:11:3.88:0,4,137	0/0:18,0:18:23.98:0,24,206	1/1:4,23:27:39.75:634,40,0	1/1:2,15:17:45.12:497,45,0	1/1:13,23:36:67.92:832,68,0	1/1:5,27:32:81.20:885,81,0	0/0:32,0:32:74.97:0,75,651	0/0:33,0:33:86.97:0,87,755	0/0:23,0:23:62.97:0,63,547	1/1:4,19:23:48.13:529,48,0	0/0:21,0:21:59.90:0,60,506	1/1:3,28:31:69.18:755,69,0	0/0:35,0:35:95.92:0,96,822	0/0:22,0:22:53.97:0,54,469	0/0:29,0:29:68.94:0,69,590	1/1:0,14:14:39.11:431,39,0	0/0:17,0:17:38.97:0,39,334	0/0:32,0:33:82.98:0,83,706	0/0:23,1:24:23.73:0,24,422	1/1:5,28:33:61.10:887,61,0	0/0:25,0:25:62.97:0,63,543	0/0:25,0:25:53.92:0,54,462	1/1:1,21:22:57.15:631,57,0	0/0:41,0:41:99:0,114,986	0/0:28,0:29:73.96:0,74,621	0/0:18,0:18:44.93:0,45,384
chr10	89124697	.	G	GTAGACTC	21688.61	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=0.427;DP=689;FS=4.209;HRun=0;HaplotypeScore=166.9325;InbreedingCoeff=0.9980;MQ=81.15;MQ0=0;MQRankSum=-18.828;QD=80.33;ReadPosRankSum=-0.545;VQSLOD=5.0959;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,16:28:42.14:1612,42,0	0/0:18,0:18:51.16:0,51,1238	0/0:27,0:27:75.22:0,75,1796	0/0:19,0:19:54.16:0,54,1300	1/1:8,17:27:46.10:1611,46,0	1/1:6,20:26:54.19:2102,54,0	1/1:7,18:26:54.18:2055,54,0	1/1:10,26:39:99:4042,111,0	1/1:5,20:27:63.22:2349,63,0	0/0:24,0:24:63.22:0,63,1558	0/0:14,0:14:30.10:0,30,729	1/1:3,16:20:54.19:2024,54,0	0/0:25,0:25:63.22:0,63,1620	1/1:5,19:25:63.22:2394,63,0	0/0:27,0:27:78.27:0,78,1971	0/0:26,0:26:78.27:0,78,1921	0/0:32,0:32:93.25:0,93,2259	1/1:6,7:13:27.09:1051,27,0	0/0:26,0:26:78.25:0,78,1770	0/0:32,0:32:90.31:0,90,2275	0/0:31,0:31:87.30:0,87,2224	1/1:8,6:15:21.07:787,21,0	0/0:26,0:26:78.23:0,78,1869	0/0:21,0:21:57.20:0,57,1452	1/1:6,16:22:45.15:1660,45,0	0/0:25,0:25:69.24:0,69,1784	0/0:39,0:39:99:0,114,2784	0/0:7,0:7:18.04:0,18,413
chr10	89125073	.	GACAGAGAGAGAGAC	G	1664.80	PASS	AB=0.985;AC=10;AF=0.179;AN=56;BaseQRankSum=1.807;DP=707;FS=12.462;HRun=0;HaplotypeScore=250.3691;InbreedingCoeff=0.6924;MQ=58.54;MQ0=14;MQRankSum=-3.281;QD=16.01;ReadPosRankSum=1.135;VQSLOD=1.1962;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:44.36:0,44,2001	1/1:6,1:7:3.01:111,3,0	0/0:27,0:11:9.23:0,9,192	0/0:66,0:31:29.68:0,30,596	0/0:18,0:15:21.07:0,21,599	0/0:25,0:24:33.10:0,33,925	0/0:34,0:32:48.12:0,48,1452	0/0:35,0:33:75.24:0,75,1610	0/0:26,0:26:33.10:0,33,1036	1/1:17,2:17:42:897,42,0	1/1:8,0:7:9.03:169,9,0	0/0:25,0:25:27.56:0,28,994	0/0:16,0:16:42.13:0,42,1491	0/0:28,0:25:42.01:0,42,1236	0/0:33,0:33:78.24:0,78,2777	0/0:19,0:19:45.12:0,45,1978	1/1:19,1:20:20.83:516,21,0	0/1:18,0:18:7.82:8,0,819	0/0:14,0:12:33.08:0,33,1073	0/0:22,0:22:54.12:0,54,1821	0/0:33,0:33:66.21:0,66,2755	0/0:33,0:31:30.08:0,30,760	0/0:19,0:19:45.14:0,45,1576	0/0:34,0:34:75.26:0,75,3476	0/0:24,0:21:33.11:0,33,1129	0/1:31,1:31:99:119,0,2240	0/0:24,0:24:60.15:0,60,2375	0/0:15,0:14:39.13:0,39,1792
chr10	89125093	.	G	GAC	1341.08	PASS	AB=0.851;AC=12;AF=0.214;AN=56;BaseQRankSum=9.387;DP=768;FS=1.767;HRun=0;HaplotypeScore=131.5388;InbreedingCoeff=-0.2806;MQ=53.43;MQ0=18;MQRankSum=-3.907;QD=4.37;ReadPosRankSum=-3.625;VQSLOD=1.5598;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:49.35:0,49,753	0/1:5,1:6:18.96:19,0,19	0/0:25,0:9:6.06:0,6,226	0/0:52,0:23:30.60:0,31,446	0/0:21,8:26:20.99:0,21,317	0/1:24,4:22:18.18:18,0,376	0/0:25,10:34:48.11:0,48,648	0/1:34,16:49:99:592,0,1115	0/1:22,0:22:42.01:42,0,363	0/1:25,1:24:99:314,0,421	0/1:8,2:10:74.65:119,0,75	0/1:23,5:28:23.77:24,0,378	0/0:22,0:22:60.19:0,60,893	0/1:23,9:27:59.52:60,0,484	0/0:33,0:33:96.23:0,96,1354	0/0:20,0:20:60.17:0,60,871	0/1:15,2:17:25.91:198,0,26	0/1:12,5:18:72.96:73,0,362	0/0:20,0:17:51.15:0,51,751	0/0:25,0:25:75.19:0,75,1039	0/0:39,0:39:93.20:0,93,1330	0/1:30,7:32:12.98:13,0,374	0/0:19,0:19:51.17:0,51,776	0/0:38,0:38:99:0,102,1426	0/1:25,7:28:20.15:20,0,385	0/0:34,0:33:4.95:0,5,1166	0/0:23,0:23:69.22:0,69,1021	0/0:16,0:15:45.15:0,45,685
chr10	89125127	.	C	CAG	1017.41	PASS	AB=0.788;AC=9;AF=0.161;AN=56;BaseQRankSum=4.441;DP=788;FS=19.763;HRun=0;HaplotypeScore=141.9707;InbreedingCoeff=-0.1957;MQ=51.40;MQ0=19;MQRankSum=-2.287;QD=3.67;ReadPosRankSum=-3.832;VQSLOD=-0.0050;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:36:99:140,0,336	0/0:7,0:7:9.03:0,9,128	0/0:33,0:17:41.63:0,42,503	0/0:71,0:28:43.09:0,43,564	0/1:23,11:30:76.59:77,0,273	0/1:10,13:17:88.42:88,0,194	0/1:26,6:30:37.58:38,0,391	0/1:44,4:46:99:199,0,1110	0/0:28,0:28:23.15:0,23,588	0/0:24,0:24:64.85:0,65,859	0/0:13,0:13:14.88:0,15,196	0/1:14,14:28:99:203,0,184	0/0:21,0:21:60.20:0,60,855	0/1:17,13:25:99:171,0,281	0/0:30,0:30:84.25:0,84,1161	0/0:19,0:19:51.15:0,51,709	0/0:20,0:20:25.28:0,25,306	0/1:11,4:15:99:178,0,220	0/0:27,0:24:69.19:0,69,958	0/0:23,0:23:60.20:0,60,858	0/0:39,0:39:99:0,99,1413	0/0:16,13:26:17.85:0,18,256	0/0:29,0:29:83.62:0,84,1128	0/0:38,0:38:82.35:0,82,1390	0/1:22,9:27:64.70:65,0,408	0/0:29,0:29:80.94:0,81,1125	0/0:17,0:17:51.17:0,51,726	0/0:12,0:12:30.10:0,30,421
chr10	89125145	.	GAC	G	1525.28	PASS	AB=0.976;AC=14;AF=0.250;AN=56;BaseQRankSum=5.547;DP=738;FS=0.000;HRun=0;HaplotypeScore=134.4852;InbreedingCoeff=0.4342;MQ=52.31;MQ0=18;MQRankSum=-2.136;QD=6.30;ReadPosRankSum=-3.039;VQSLOD=2.5525;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:14.49:0,14,37	1/1:1,9:10:18.06:239,18,0	0/0:33,0:15:35.70:0,36,441	0/0:70,0:29:41.20:0,41,610	0/0:28,0:24:1.96:0,2,164	0/0:23,1:19:29.33:0,29,229	0/0:26,0:25:44.74:0,45,356	0/1:38,0:37:99:120,0,317	0/0:27,0:27:10.15:0,10,49	1/1:3,25:28:70.45:754,70,0	1/1:16,1:16:11.66:115,12,0	0/1:24,1:25:4.14:4,0,213	0/0:22,0:22:66.20:0,66,1105	0/1:29,0:24:31.03:31,0,148	0/0:26,0:26:75.17:0,75,1198	0/0:19,0:19:51.14:0,51,845	1/1:3,21:24:29.82:381,30,0	0/1:14,0:14:33.98:34,0,144	0/0:21,0:18:48.14:0,48,796	0/0:24,0:24:72.18:0,72,1167	0/0:34,0:34:81.14:0,81,1240	0/1:24,2:21:0.09:0,0,137	0/0:24,0:24:69.16:0,69,1073	0/0:33,0:33:78.20:0,78,1312	0/1:30,1:27:16.95:17,0,283	0/0:29,2:31:13.26:0,13,1343	0/0:17,0:17:42.09:0,42,654	0/0:8,0:7:21.03:0,21,311
chr10	89125161	.	GAC	G	2819.43	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=4.382;DP=693;FS=0.426;HRun=0;HaplotypeScore=113.4773;InbreedingCoeff=0.6061;MQ=56.66;MQ0=18;MQRankSum=0.210;QD=11.95;ReadPosRankSum=0.614;VQSLOD=3.5590;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:32:36.42:550,36,0	1/1:8,1:9:18.06:236,18,0	0/0:38,0:16:41.36:0,41,457	0/0:62,0:29:37.56:0,38,451	0/0:19,1:18:2.97:0,3,167	0/0:23,0:18:29.24:0,29,228	0/0:23,0:23:22.75:0,23,327	0/1:37,0:36:99:150,0,318	1/1:1,22:23:47.92:726,48,0	1/1:26,0:26:38.57:661,39,0	1/1:4,13:16:9:125,9,0	0/1:21,0:21:48.65:49,0,214	0/0:22,0:22:63.17:0,63,1074	0/0:24,0:21:20.80:0,21,172	0/0:31,0:31:87.19:0,87,1409	0/0:20,0:20:60.17:0,60,1065	1/1:23,1:24:38.80:455,39,0	0/0:10,0:10:20.41:0,20,174	0/0:22,0:19:54.16:0,54,904	0/0:24,0:24:72.20:0,72,1239	0/0:30,0:30:78.15:0,78,1316	0/1:20,0:15:22:22,0,134	0/0:21,0:21:63.22:0,63,1166	0/0:33,0:33:87.21:0,87,1483	0/1:26,0:24:38.96:39,0,269	0/0:30,0:30:11.26:0,11,1432	0/0:13,0:13:39.10:0,39,664	0/0:11,0:10:30.08:0,30,536
chr10	89125340	.	GTA	G	6758.69	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.355;DP=623;FS=11.144;HRun=0;HaplotypeScore=100.6840;InbreedingCoeff=0.9993;MQ=72.58;MQ0=0;MQRankSum=-2.828;QD=35.76;ReadPosRankSum=1.084;VQSLOD=6.8313;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:99:0,114,2012	0/0:9,0:9:24.07:0,24,403	0/0:12,0:12:30.10:0,30,519	0/0:12,0:12:27.09:0,27,435	1/1:2,21:23:57.19:798,57,0	1/1:1,14:14:42.14:588,42,0	1/1:1,25:26:60.20:840,60,0	1/1:2,24:26:72.24:1008,72,0	0/0:28,0:28:78.27:0,78,1394	0/0:32,0:32:90.31:0,90,1621	0/0:22,0:22:66.21:0,66,1150	1/1:0,20:20:60.20:839,60,0	0/0:29,0:29:84.29:0,84,1504	1/1:1,13:14:30.10:420,30,0	0/0:21,0:21:57.20:0,57,1027	0/0:21,0:21:57.20:0,57,1027	0/0:32,0:32:96.31:0,96,1698	1/1:2,17:19:48.16:672,48,0	0/0:22,0:22:63.22:0,63,1135	0/0:21,0:21:60.21:0,60,1069	0/0:16,0:16:48.15:0,48,834	1/1:2,23:24:54.18:756,54,0	0/0:14,0:14:42.14:0,42,756	0/0:32,0:32:84.28:0,84,1484	1/1:1,20:21:60.20:837,60,0	0/0:22,0:22:63.20:0,63,1081	0/0:26,0:26:72.25:0,72,1275	0/0:21,0:21:63.22:0,63,1134
chr10	89125659	.	G	GT	745.45	PASS	AB=0.957;AC=3;AF=0.054;AN=56;BaseQRankSum=1.007;DP=779;FS=4.352;HRun=3;HaplotypeScore=115.3448;InbreedingCoeff=0.6650;MQ=80.40;MQ0=0;MQRankSum=-2.631;QD=13.80;ReadPosRankSum=-3.889;VQSLOD=1.6244;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,100,550	0/0:10,0:10:27.44:0,27,123	0/0:30,0:30:68.87:0,69,752	0/0:31,0:30:72.20:0,72,843	0/0:33,1:34:45.58:0,46,402	0/0:24,0:24:50.93:0,51,290	0/0:27,0:27:73.99:0,74,370	1/1:5,26:31:64.66:837,65,0	0/0:29,0:29:71.75:0,72,383	0/0:41,0:41:99:0,113,718	0/0:25,0:25:60.40:0,60,303	0/0:26,0:26:38.85:0,39,289	0/0:31,0:31:84.23:0,84,992	0/0:29,0:29:66.46:0,66,336	0/0:29,0:29:78.24:0,78,935	0/0:41,0:41:99:0,117,1404	0/0:16,0:16:35.89:0,36,160	0/0:16,0:16:34.52:0,35,193	0/0:24,0:24:66.18:0,66,772	0/0:29,0:29:84.26:0,84,1008	0/0:42,0:42:99:0,123,1463	0/1:21,1:22:11.08:11,0,204	0/0:20,0:20:48.15:0,48,575	0/0:33,0:33:99:0,99,1176	0/0:29,0:29:65.98:0,66,344	0/0:33,0:33:96.29:0,96,1151	0/0:21,0:21:60.18:0,60,719	0/0:16,0:16:45.14:0,45,536
chr10	89125663	.	G	GT	4107.13	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.009;DP=776;FS=2.092;HRun=6;HaplotypeScore=104.9409;InbreedingCoeff=0.9809;MQ=80.05;MQ0=0;MQRankSum=-0.255;QD=32.86;ReadPosRankSum=-3.084;VQSLOD=1.6548;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:55.88:0,56,501	1/1:0,11:11:33.06:397,33,0	0/0:27,0:27:50.99:0,51,491	0/0:33,0:32:64.14:0,64,694	0/0:33,0:33:45:0,45,398	0/0:23,0:23:31.31:0,31,271	0/0:28,0:28:70.96:0,71,351	1/1:32,0:31:60.64:807,61,0	0/0:30,0:30:48.18:0,48,353	1/1:2,38:40:99:1432,114,0	1/1:1,24:25:69.22:867,69,0	0/0:24,0:24:62.52:0,63,315	0/0:27,0:27:72.16:0,72,734	0/0:31,0:31:23.58:0,24,286	0/0:27,0:27:72.16:0,72,734	0/0:40,0:40:99:0,114,1157	1/1:1,16:17:48.15:604,48,0	0/0:15,0:15:34.07:0,34,191	0/0:24,0:24:66.15:0,66,673	0/0:28,0:28:81.18:0,81,826	0/0:42,0:42:99:0,117,1193	0/0:21,0:21:7.43:0,7,212	0/0:19,0:19:51.11:0,51,519	0/0:36,0:36:99:0,108,1093	0/0:29,0:29:71.82:0,72,351	0/0:33,0:33:90.20:0,90,917	0/0:20,0:20:57.13:0,57,582	0/0:16,0:16:45.10:0,45,458
chr10	89126186	.	TACACAC	T	1644.26	PASS	AB=0.926;AC=27;AF=0.519;AN=52;BaseQRankSum=7.530;DP=520;FS=2.357;HRun=0;HaplotypeScore=122.9877;InbreedingCoeff=0.5770;MQ=59.72;MQ0=3;MQRankSum=-5.119;QD=5.94;ReadPosRankSum=2.455;VQSLOD=2.3404;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:26:0.02:57,0,0	1/1:3,0:6:2.92:42,3,0	./.	./.	1/1:4,9:13:8.99:126,9,0	1/1:20,2:23:14.71:199,15,0	1/1:11,8:21:2.42:60,2,0	1/1:23,0:23:1.95:7,2,0	1/1:12,0:21:15.05:209,15,0	1/1:13,0:25:20.53:237,21,0	1/1:10,0:16:6.02:84,6,0	1/1:6,11:17:5.44:116,5,0	0/0:19,0:19:21.07:0,21,623	1/1:11,8:19:6.02:121,6,0	0/0:19,0:20:35.84:0,36,900	0/0:16,0:17:30.09:0,30,751	0/1:21,0:21:38.34:38,0,52	0/1:13,0:14:73.67:88,0,74	0/0:14,0:15:12.51:0,13,252	0/0:23,0:22:27.04:0,27,569	0/0:22,0:22:30.08:0,30,683	1/1:6,9:15:18.02:323,18,0	0/0:16,0:16:23.74:0,24,596	0/0:30,0:30:51.15:0,51,1303	0/1:14,1:16:23.28:121,0,23	0/0:24,0:25:36.11:0,36,752	0/0:21,0:22:29.87:0,30,654	0/0:7,0:7:13.26:0,13,269
chr10	89129084	.	TG	T	3778.39	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.603;DP=500;FS=0.412;HRun=2;HaplotypeScore=68.0740;InbreedingCoeff=0.9129;MQ=89.70;MQ0=0;MQRankSum=-3.471;QD=35.31;ReadPosRankSum=2.798;VQSLOD=4.1349;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,41:42:99:1441,111,0	1/1:0,2:2:3.01:39,3,0	0/0:17,0:17:30.08:0,30,397	0/0:21,0:21:52.17:0,52,703	0/0:18,0:18:48.14:0,48,680	0/0:19,0:19:54.18:0,54,804	0/0:15,0:15:45.13:0,45,653	0/0:23,0:23:69.23:0,69,1016	1/1:0,13:13:36.12:467,36,0	1/1:0,20:20:57.19:740,57,0	1/1:0,12:12:36.12:467,36,0	0/0:13,0:13:36.12:0,36,533	0/0:14,0:14:42.13:0,42,609	0/0:18,0:18:54.18:0,54,809	0/0:13,0:13:39.13:0,39,584	0/0:12,1:13:0.17:0,0,501	1/1:1,17:18:48.16:623,48,0	0/0:14,0:14:39.13:0,39,585	0/0:15,0:15:36.12:0,36,540	0/0:21,0:21:57.19:0,57,853	0/0:36,0:36:99:0,99,1484	0/0:16,0:16:48.16:0,48,718	0/0:20,0:20:60.16:0,60,873	0/0:16,0:16:45.15:0,45,674	0/0:10,0:10:30.10:0,30,450	0/0:29,0:29:81.27:0,81,1214	0/0:23,0:23:66.20:0,66,959	0/0:9,0:9:27.09:0,27,404
chr10	89130526	.	TG	T	3028.91	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.748;DP=715;FS=5.620;HRun=1;HaplotypeScore=92.2102;InbreedingCoeff=0.9537;MQ=92.60;MQ0=0;MQRankSum=-5.515;QD=36.94;ReadPosRankSum=1.255;VQSLOD=3.9751;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,175,2699	1/1:0,8:8:24.08:335,24,0	0/0:31,0:31:83.36:0,83,1326	0/0:30,0:30:79.54:0,80,1250	0/0:17,0:17:48.16:0,48,762	0/0:16,0:16:45.15:0,45,716	0/0:30,0:30:90.20:0,90,1355	0/0:34,0:34:78.26:0,78,1214	0/0:31,0:31:90.31:0,90,1430	1/1:0,18:18:51.17:713,51,0	1/1:1,13:14:39.06:518,39,0	0/0:27,0:27:78.27:0,78,1243	0/0:24,0:24:66.14:0,66,999	0/0:36,0:36:99:0,108,1695	0/0:33,0:33:96.30:0,96,1487	0/0:26,0:26:78.25:0,78,1216	1/1:3,39:42:99:1623,120,0	0/0:17,0:17:51.17:0,51,812	0/0:19,0:19:57.19:0,57,905	0/0:23,0:23:60.19:0,60,927	0/0:36,0:36:99:0,102,1595	0/0:24,0:24:72.16:0,72,1101	0/0:19,0:19:57.12:0,57,793	0/0:33,0:33:87.28:0,87,1366	0/0:11,0:11:33.11:0,33,524	0/0:14,1:15:3.20:0,3,629	0/0:25,0:24:75.26:0,75,1197	0/0:15,0:15:45.15:0,45,718
chr10	89132445	.	AGATG	A	1018.09	PASS	AB=0.583;AC=17;AF=0.304;AN=56;BaseQRankSum=5.411;DP=277;FS=2.219;HRun=0;HaplotypeScore=49.1830;InbreedingCoeff=0.7376;MQ=87.48;MQ0=1;MQRankSum=-0.197;QD=15.20;ReadPosRankSum=1.063;VQSLOD=3.1398;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:36.08:0,36,581	0/0:4,0:4:9.03:0,9,187	0/0:30,0:20:36.09:0,36,613	0/0:27,0:22:46.38:0,46,992	1/1:4,6:10:6.02:103,6,0	1/1:3,3:6:3.01:52,3,0	1/1:3,8:11:12.04:188,12,0	1/1:3,8:11:21.04:289,21,0	0/0:7,0:7:12.04:0,12,268	0/0:8,0:8:12.04:0,12,302	0/0:8,0:8:21.07:0,21,471	1/1:3,4:7:6.02:100,6,0	0/0:8,0:8:18.04:0,18,345	1/1:1,5:6:9.03:138,9,0	0/0:9,0:9:18.05:0,18,376	0/0:10,0:10:12.04:0,12,293	0/0:14,0:14:33.07:0,33,613	1/1:1,3:4:3.01:51,3,0	0/0:8,0:8:12.03:0,12,195	0/0:8,0:8:9.03:0,9,190	0/0:20,0:20:39.08:0,39,930	1/1:2,3:5:9.03:155,9,0	0/0:5,0:5:9.02:0,9,135	0/0:9,0:9:24.03:0,24,462	0/1:2,5:7:5.93:123,0,6	0/0:5,0:5:9.02:0,9,156	0/0:6,0:6:12.04:0,12,302	0/0:3,0:3:7.58:0,8,151
chr10	89132941	.	GGA	G	205.36	PASS	AB=0.954;AC=15;AF=0.268;AN=56;BaseQRankSum=6.808;DP=561;FS=50.322;HRun=0;HaplotypeScore=94.7585;InbreedingCoeff=0.2161;MQ=54.33;MQ0=32;MQRankSum=-3.212;QD=0.95;ReadPosRankSum=-2.335;VQSLOD=-0.4282;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,1:24:11.78:53,0,12	0/1:6,1:7:19.57:23,0,20	0/1:61,1:19:20.48:20,0,284	0/0:90,2:22:27.25:0,27,621	0/1:8,0:8:0:0,0,0	0/1:12,0:12:1.75:2,0,31	0/0:21,0:20:0.75:0,1,3	0/0:28,0:28:2.93:0,3,80	0/1:10,0:9:15.35:15,0,20	1/1:13,0:14:17.59:137,18,0	0/0:10,2:12:2.75:0,3,20	1/1:17,0:17:2.09:7,2,0	0/0:17,0:16:45.05:0,45,709	1/1:12,0:12:2.92:43,3,0	0/0:11,0:11:25.79:0,26,328	0/0:12,0:12:36.12:0,36,623	0/1:20,1:20:3:4,0,3	0/1:17,1:16:0.23:27,0,0	0/1:8,1:8:18.95:19,0,130	0/0:8,0:8:15.02:0,15,212	0/0:22,0:21:43.74:0,44,662	0/0:17,0:17:6.26:0,6,33	0/0:16,0:14:36.09:0,36,556	0/0:17,0:14:36.05:0,36,552	0/0:12,0:12:4.27:0,4,10	0/0:20,0:19:35.34:0,35,742	0/0:27,0:27:65.46:0,65,1094	0/0:12,0:9:24.08:0,24,380
chr10	89132942	.	GAAGA	G	3963.04	PASS	AB=0.838;AC=32;AF=0.571;AN=56;BaseQRankSum=0.434;DP=547;FS=6.587;HRun=0;HaplotypeScore=93.0705;InbreedingCoeff=0.7583;MQ=53.25;MQ0=32;MQRankSum=0.748;QD=13.53;ReadPosRankSum=-1.154;VQSLOD=2.1578;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:29.31:359,29,0	1/1:6,0:6:17.02:139,17,0	0/1:59,0:18:11.66:12,0,151	0/0:90,0:21:34.68:0,35,369	1/1:7,0:7:8.99:77,9,0	1/1:12,0:12:4.50:163,5,0	1/1:21,0:20:53.98:466,54,0	1/1:12,0:26:53.97:581,54,0	1/1:8,0:7:14.41:149,14,0	1/1:3,0:14:35.90:335,36,0	1/1:11,0:11:17.20:133,17,0	1/1:0,17:17:2.66:17,3,0	0/0:17,0:16:44.29:0,44,357	1/1:12,0:12:31.93:256,32,0	0/0:10,0:10:22.59:0,23,166	0/0:12,0:12:35.98:0,36,510	1/1:21,0:20:42.08:313,42,0	1/1:15,1:15:38.73:351,39,0	0/1:5,2:8:38.96:90,0,39	0/0:9,0:9:11.83:0,12,95	0/0:21,0:20:1.34:0,1,279	1/1:16,0:16:41.98:360,42,0	0/0:16,0:15:32.33:0,32,259	0/0:16,0:14:10.33:0,10,230	1/1:11,0:11:20.49:163,20,0	0/0:21,0:20:24.91:0,25,344	0/0:27,0:27:56.72:0,57,556	0/0:13,0:10:23.80:0,24,189
chr10	89132943	.	AAGAGAGAG	A	446.20	PASS	AB=0.989;AC=11;AF=0.262;AN=42;BaseQRankSum=2.495;DP=547;FS=24.712;HRun=0;HaplotypeScore=132.2863;InbreedingCoeff=0.2029;MQ=51.66;MQ0=32;MQRankSum=-1.312;QD=4.09;ReadPosRankSum=-0.514;VQSLOD=1.0307;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:5.16:0,5,43	1/1:6,0:6:3.01:66,3,0	./.	./.	./.	0/0:11,0:11:2.97:0,3,20	0/0:22,0:21:3.01:0,3,56	./.	0/0:8,0:7:3.01:0,3,37	1/1:15,0:14:11.30:132,11,0	0/0:12,0:12:3:0,3,29	0/0:17,0:17:3.01:0,3,67	0/0:16,0:16:3.01:0,3,36	1/1:12,0:12:3.01:72,3,0	0/0:11,0:11:0:0,0,0	0/0:13,0:13:15.05:0,15,530	0/0:21,0:19:0.47:0,0,1	0/1:17,0:15:17.55:63,0,18	0/1:11,0:10:36.87:37,0,38	./.	0/0:21,0:20:8.80:0,9,75	./.	0/0:16,0:14:6.02:0,6,105	0/0:16,0:14:5.84:0,6,48	0/0:10,0:10:0:0,0,0	1/1:17,3:19:3.13:138,3,0	0/1:27,1:28:56.89:57,0,166	./.
chr10	89133757	.	C	CA	5783.23	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-11.161;DP=634;FS=3.587;HRun=1;HaplotypeScore=65.0455;InbreedingCoeff=0.9987;MQ=84.19;MQ0=0;MQRankSum=-1.785;QD=34.22;ReadPosRankSum=1.826;VQSLOD=4.8143;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,153,1824	0/0:9,0:9:27.07:0,27,334	0/0:19,0:19:56.67:0,57,619	0/0:23,0:23:53.67:0,54,707	1/1:0,19:19:45.06:596,45,0	1/1:0,9:9:21.07:302,21,0	1/1:1,21:22:63.21:905,63,0	1/1:0,18:18:54.14:706,54,0	0/0:20,0:20:54.14:0,54,658	0/0:24,0:24:69.11:0,69,826	0/0:10,0:10:27.09:0,27,350	1/1:0,24:24:54.18:776,54,0	0/0:23,0:23:69.17:0,69,839	1/1:0,21:21:42.14:604,42,0	0/0:17,0:17:51.12:0,51,617	0/0:17,0:17:51.17:0,51,659	0/0:33,0:33:96.25:0,96,1175	1/1:0,22:22:54.18:777,54,0	0/0:23,0:23:48.17:0,48,628	0/0:17,0:17:48.11:0,48,602	0/0:72,0:72:99:0,214,2601	1/1:2,13:15:42.14:599,42,0	0/0:14,0:14:39.05:0,39,443	0/0:37,0:37:99:0,105,1316	1/1:0,19:19:36.12:518,36,0	0/0:22,0:22:63.15:0,63,762	0/0:24,0:24:72.18:0,72,886	0/0:9,0:9:24.02:0,24,264
chr10	89134021	.	GT	G	2185.35	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.766;DP=656;FS=4.001;HRun=2;HaplotypeScore=60.8019;InbreedingCoeff=0.9842;MQ=85.52;MQ0=0;MQRankSum=-5.533;QD=37.68;ReadPosRankSum=1.913;VQSLOD=4.4068;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:99:1384,99,0	0/0:11,0:11:33.11:0,33,516	0/0:23,0:22:66.18:0,66,968	0/0:20,0:20:57.05:0,57,903	0/0:27,0:27:81.24:0,81,1240	0/0:29,0:29:84.27:0,84,1319	0/0:27,0:27:81.28:0,81,1292	0/0:18,0:18:54.18:0,54,860	1/1:0,24:24:66.22:923,66,0	0/0:28,0:28:84.28:0,84,1306	0/0:18,0:18:51.17:0,51,815	0/0:21,0:21:63.20:0,63,978	0/0:27,0:27:81.28:0,81,1288	0/0:33,0:33:99:0,99,1583	0/0:18,0:18:51.17:0,51,815	0/0:24,0:24:72.25:0,72,1148	0/0:28,0:28:84.27:0,84,1314	0/0:21,0:21:54.18:0,54,863	0/0:20,0:20:60.20:0,60,955	0/0:20,0:20:57.19:0,57,907	0/0:41,0:41:99:0,123,1917	0/0:14,0:14:39.13:0,39,623	0/0:16,0:16:45.15:0,45,711	0/0:37,0:37:99:0,111,1775	0/0:22,0:22:66.23:0,66,1055	0/0:25,0:25:75.26:0,75,1196	0/0:26,0:26:75.24:0,75,1173	0/0:4,0:4:12.04:0,12,189
chr10	89135412	.	A	ATG	5572.30	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.654;DP=1266;FS=1.161;HRun=0;HaplotypeScore=217.1555;InbreedingCoeff=0.9989;MQ=56.54;MQ0=5;MQRankSum=-2.729;QD=36.66;ReadPosRankSum=2.851;VQSLOD=4.9836;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:40:21.44:0,21,318	1/1:2,22:24:54.12:884,54,0	0/0:45,0:22:54.10:0,54,656	0/0:46,0:31:51.41:0,51,600	0/0:29,0:29:35.87:0,36,468	0/0:29,0:29:75.19:0,75,975	0/0:31,0:31:69.15:0,69,848	0/0:69,0:69:99:0,153,2094	0/0:63,0:63:77.70:0,78,954	1/1:7,64:68:99:3107,187,0	1/1:1,30:31:39.03:662,39,0	0/0:51,0:51:99:0,114,1383	0/0:47,0:47:99:0,117,1521	0/0:55,0:55:99:0,141,1744	0/0:61,0:61:99:0,165,2101	0/0:66,0:66:99:0,175,2233	1/1:4,22:25:54.18:918,54,0	0/0:39,0:39:96.28:0,96,1228	0/0:18,0:18:42.02:0,42,533	0/0:47,0:47:99:0,129,1613	0/0:98,0:98:99:0,256,3221	0/0:47,0:47:59.78:0,60,745	0/0:26,0:27:44.31:0,44,590	0/0:44,0:44:99:0,99,1254	0/0:40,0:39:57.18:0,57,739	0/0:57,1:58:99:0,99,1859	0/0:36,0:36:90.26:0,90,1140	0/0:28,0:28:75.18:0,75,927
chr10	89136640	.	G	GTGATATA	3536.82	PASS	AB=0.540;AC=5;AF=0.089;AN=56;BaseQRankSum=6.892;DP=659;FS=0.647;HRun=0;HaplotypeScore=161.9196;InbreedingCoeff=0.8529;MQ=60.12;MQ0=0;MQRankSum=-7.262;QD=45.93;ReadPosRankSum=0.226;VQSLOD=3.4788;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:77.70:0,78,1766	0/0:1,7:8:3.01:0,3,79	0/0:26,0:23:43.52:0,44,882	0/0:12,0:8:22.58:0,23,450	0/0:23,0:23:63.17:0,63,1659	0/0:32,0:32:93.32:0,93,2333	0/0:19,0:19:54.18:0,54,1329	0/0:44,0:44:99:0,120,2898	0/0:35,0:35:99:0,102,2509	1/1:2,27:32:84.20:2935,84,0	0/1:4,19:26:0:0,0,0	0/0:15,0:15:42.14:0,42,1042	0/0:29,0:29:81.26:0,81,2027	0/0:27,0:27:75.24:0,75,1870	0/0:25,0:25:69.22:0,69,1701	0/0:25,0:25:72.25:0,72,1857	1/1:4,11:18:14.94:602,15,0	0/0:21,0:21:58.72:0,59,1379	0/0:13,0:13:33.10:0,33,709	0/0:28,0:28:78.25:0,78,1922	0/0:23,0:23:66.21:0,66,1672	0/0:14,0:14:36.11:0,36,870	0/0:14,0:14:36.11:0,36,923	0/0:11,0:11:27.09:0,27,688	0/0:19,0:19:54.17:0,54,1291	0/0:38,0:38:40.17:0,40,2611	0/0:26,0:26:75.24:0,75,1842	0/0:18,0:19:53.51:0,54,1327
chr10	89136830	.	G	GTA	6473.71	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-11.316;DP=504;FS=0.827;HRun=0;HaplotypeScore=69.8166;InbreedingCoeff=0.9210;MQ=65.52;MQ0=2;MQRankSum=2.460;QD=36.37;ReadPosRankSum=-3.309;VQSLOD=5.7612;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:66.14:0,66,809	0/0:5,0:5:15.02:0,15,166	0/0:8,0:7:14.94:0,15,134	0/0:7,0:6:2.47:0,2,12	1/1:11,12:22:51.17:852,51,0	1/1:6,18:24:63.17:987,63,0	1/1:9,8:17:0.12:546,0,0	1/1:8,28:37:90.19:1315,90,0	0/0:24,0:24:63.18:0,63,803	0/0:31,0:31:87.24:0,87,1089	0/0:23,0:23:56.82:0,57,706	1/1:3,5:8:21.06:331,21,0	0/0:17,0:17:48.11:0,48,578	1/1:5,10:14:30.08:458,30,0	0/0:19,0:19:54.18:0,54,702	0/0:18,0:18:51.13:0,51,633	0/0:20,0:19:48.08:0,48,571	1/1:4,15:19:48.16:816,48,0	0/0:16,0:16:42.10:0,42,489	0/0:15,0:15:45.15:0,45,584	0/0:7,0:7:21.05:0,21,258	1/1:5,4:8:18.03:230,18,0	0/0:15,0:15:36.12:0,36,468	0/0:6,0:6:15:0,15,150	1/1:8,17:24:60.16:939,60,0	0/0:26,0:26:66.17:0,66,798	0/0:22,0:22:54.12:0,54,654	0/0:17,0:17:42.07:0,42,485
chr10	89136897	.	CAT	C	3055.42	PASS	AB=0.900;AC=25;AF=0.481;AN=52;BaseQRankSum=10.890;DP=388;FS=12.978;HRun=0;HaplotypeScore=56.5008;InbreedingCoeff=0.8728;MQ=58.95;MQ0=1;MQRankSum=1.306;QD=16.97;ReadPosRankSum=1.297;VQSLOD=2.5606;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:45.15:0,45,725	1/1:2,6:8:15.05:185,15,0	./.	./.	1/1:3,13:16:26.83:332,27,0	1/1:9,15:25:41.96:493,42,0	1/1:4,4:8:12.04:148,12,0	0/0:35,1:36:44.34:0,44,1224	0/0:20,0:20:36.11:0,36,560	1/1:11,9:21:29.89:319,30,0	1/1:5,12:17:27.07:332,27,0	1/1:2,12:14:33.10:406,33,0	0/0:7,0:7:15.05:0,15,243	1/1:4,6:11:8.86:88,9,0	0/0:11,0:11:30.09:0,30,465	0/1:7,1:9:15.88:16,0,223	1/1:3,11:14:25.32:298,25,0	1/1:6,14:20:36.09:429,36,0	0/0:14,0:14:27.09:0,27,441	0/0:16,0:16:36.12:0,36,584	0/0:9,0:9:21.07:0,21,339	1/1:1,2:3:6.02:74,6,0	0/0:7,0:7:15.05:0,15,242	0/0:5,0:5:9.03:0,9,147	1/1:7,6:13:12.04:148,12,0	0/0:22,0:22:63.21:0,63,1004	0/0:20,2:21:17.21:0,17,738	0/0:11,0:11:33.11:0,33,538
chr10	89138005	.	AG	A	2776	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.371;DP=686;FS=2.116;HRun=1;HaplotypeScore=68.1918;InbreedingCoeff=0.9994;MQ=86.04;MQ0=0;MQRankSum=-1.086;QD=37.51;ReadPosRankSum=1.346;VQSLOD=4.2061;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,184,2843	1/1:0,10:10:24.08:336,24,0	0/0:24,0:24:69.21:0,69,1018	0/0:24,0:24:72.19:0,72,1059	0/0:17,0:17:51.17:0,51,815	0/0:27,0:27:81.26:0,81,1272	0/0:25,0:25:75.26:0,75,1197	0/0:28,0:28:84.29:0,84,1342	0/0:23,0:23:66.66:0,67,1000	1/1:0,28:28:81.27:1133,81,0	1/1:0,17:17:48.16:671,48,0	0/0:20,0:20:60.20:0,60,959	0/0:22,0:22:66.23:0,66,1055	0/0:21,0:21:63.21:0,63,1007	0/0:29,0:29:87.30:0,87,1391	0/0:23,0:23:69.24:0,69,1103	1/1:0,19:19:57.19:796,57,0	0/0:23,0:23:69.18:0,69,1031	0/0:24,0:24:72.22:0,72,1121	0/0:23,0:23:69.24:0,69,1096	0/0:28,0:28:84.29:0,84,1335	0/0:29,0:29:87.30:0,87,1381	0/0:20,0:20:60.20:0,60,959	0/0:34,0:34:99:0,102,1622	0/0:26,0:26:78.27:0,78,1244	0/0:24,0:24:72.25:0,72,1151	0/0:22,0:21:66.21:0,66,1030	0/0:15,0:15:45.15:0,45,719
chr10	89140376	.	TACACACACAC	T	1491.23	PASS	AB=0.647;AC=11;AF=0.212;AN=52;BaseQRankSum=4.148;DP=783;FS=5.284;HRun=0;HaplotypeScore=229.6284;InbreedingCoeff=0.5703;MQ=53.57;MQ0=10;MQRankSum=-5.192;QD=8.02;ReadPosRankSum=1.121;VQSLOD=2.0024;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:35:27.06:0,27,611	0/0:7,0:14:12.04:0,12,391	0/0:48,0:19:3:0,3,46	./.	1/1:16,3:20:13.11:251,13,0	1/1:13,11:23:12.01:292,12,0	0/1:14,14:29:7.26:285,0,7	0/0:16,0:16:2.82:0,3,20	0/0:25,0:25:36.12:0,36,1057	0/0:14,0:21:45.11:0,45,1110	0/0:17,0:17:27.09:0,27,1147	0/1:11,13:24:3.82:433,0,4	0/0:24,0:25:57.20:0,57,2472	1/1:11,14:28:9.02:190,9,0	0/0:26,0:25:36.12:0,36,1271	0/0:26,0:30:63.22:0,63,2691	0/0:24,0:37:62:0,62,1516	0/1:14,18:33:25.83:182,0,26	0/0:16,0:18:18.06:0,18,605	0/0:19,0:18:33.11:0,33,1169	0/0:54,0:59:99:0,115,4016	1/1:11,16:27:2.49:10,2,0	0/0:19,0:19:23.88:0,24,959	0/0:42,0:45:99:0,99,4213	./.	0/0:26,0:26:56.98:0,57,1947	0/0:30,0:30:57.18:0,57,2118	0/0:17,0:19:37.90:0,38,1407
chr10	89140721	.	A	AAAG	1568.91	PASS	AB=0.746;AC=17;AF=0.304;AN=56;BaseQRankSum=-3.192;DP=534;FS=4.071;HRun=0;HaplotypeScore=85.2486;InbreedingCoeff=0.7393;MQ=56.36;MQ0=19;MQRankSum=0.592;QD=8.13;ReadPosRankSum=1.964;VQSLOD=2.6411;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:50.68:0,51,450	0/0:9,0:9:26.46:0,26,240	0/0:25,0:10:3.96:0,4,87	0/1:25,0:10:0.06:0,0,14	1/1:6,12:19:23.22:218,23,0	0/1:3,8:12:5.68:86,0,6	1/1:4,12:18:7.65:132,8,0	1/1:9,16:25:28.88:507,29,0	0/0:14,0:14:26.22:0,26,145	0/0:20,0:20:52.94:0,53,442	0/0:19,0:19:47.49:0,47,397	0/1:8,0:16:9.35:86,0,9	0/0:24,0:24:59.43:0,59,501	1/1:6,0:12:11.26:125,11,0	0/0:16,0:16:41.89:0,42,392	0/0:18,0:18:46.10:0,46,389	0/0:16,0:15:39.76:0,40,316	1/1:7,15:22:8.43:82,8,0	0/0:18,0:17:38.20:0,38,351	0/0:21,0:20:52.80:0,53,415	0/0:8,0:8:11.98:0,12,97	1/1:4,11:18:32.10:365,32,0	0/0:26,0:26:56.29:0,56,433	0/0:17,0:16:21.83:0,22,212	1/1:3,14:17:9.03:156,9,0	0/0:23,0:23:61.82:0,62,510	0/0:26,0:26:56.01:0,56,529	0/0:8,0:8:10.96:0,11,75
chr10	89141888	.	A	AC	2485.40	PASS	AB=0.893;AC=9;AF=0.161;AN=56;BaseQRankSum=8.255;DP=686;FS=4.259;HRun=5;HaplotypeScore=72.3144;InbreedingCoeff=0.8625;MQ=81.56;MQ0=0;MQRankSum=-1.864;QD=23.23;ReadPosRankSum=0.776;VQSLOD=2.6231;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:96.20:0,96,1013	1/1:1,5:6:15.05:197,15,0	0/0:20,0:20:22.28:0,22,330	0/0:17,0:17:39.48:0,39,343	0/0:20,0:20:51.10:0,51,532	0/0:20,0:20:60.15:0,60,645	0/0:30,0:30:81.20:0,81,870	0/0:30,0:30:81.20:0,81,870	0/0:19,0:19:51.13:0,51,548	1/1:3,16:19:48.16:631,48,0	1/1:2,25:27:69.22:907,69,0	0/0:32,0:32:96.24:0,96,1026	0/0:23,0:23:69.17:0,69,742	0/0:30,0:30:84.21:0,84,902	0/0:17,0:17:42.11:0,42,451	0/0:23,0:23:66.17:0,66,709	1/1:4,26:29:66.21:868,66,0	0/0:19,0:19:54.11:0,54,570	0/0:27,0:27:81.20:0,81,871	0/0:30,0:30:75.18:0,75,806	0/0:33,0:33:93.21:0,93,991	0/0:41,0:41:99:0,120,1279	0/0:20,0:20:57.13:0,57,603	0/0:28,0:28:75.19:0,75,805	0/0:22,0:22:63.16:0,63,676	0/1:22,3:25:46.19:46,0,605	0/0:24,0:24:63.16:0,63,677	0/0:15,0:15:39.10:0,39,419
chr10	89142062	.	T	TA	4893.34	PASS	AB=0.812;AC=19;AF=0.339;AN=56;BaseQRankSum=-14.159;DP=637;FS=5.948;HRun=10;HaplotypeScore=60.8800;InbreedingCoeff=0.7404;MQ=79.13;MQ0=0;MQRankSum=-1.248;QD=18.06;ReadPosRankSum=-2.107;VQSLOD=4.7389;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,1:48:90.83:0,91,950	0/0:7,0:7:14.95:0,15,119	0/0:12,0:12:16.92:0,17,129	0/0:21,0:21:22.21:0,22,151	1/1:6,26:32:56.43:765,56,0	1/1:1,14:15:14.45:359,14,0	1/1:1,14:15:36.09:384,36,0	0/1:12,19:31:10.78:512,0,11	0/0:14,0:14:23.94:0,24,194	0/0:25,0:25:59.91:0,60,491	0/0:26,0:26:56.92:0,57,468	1/1:6,19:25:4.85:462,5,0	0/0:16,0:16:41.94:0,42,344	1/1:7,17:24:45.09:469,45,0	0/0:27,0:28:70.93:0,71,569	0/0:14,0:16:43.02:0,43,332	0/0:33,0:33:77.90:0,78,640	1/1:6,21:27:32.50:551,33,0	0/1:26,3:31:19.98:20,0,453	0/0:16,0:16:32.92:0,33,269	0/0:20,0:20:56.93:0,57,468	1/1:3,18:21:51.13:544,51,0	0/0:14,0:14:32.93:0,33,268	0/1:17,2:19:19.03:19,0,275	1/1:2,29:31:56.56:807,57,0	0/0:25,0:25:62.89:0,63,515	0/0:25,0:24:68.86:0,69,561	0/0:19,0:20:49.93:0,50,396
chr10	89142417	.	CTAACTAGTTTCCA	C	5926.80	PASS	AB=0.968;AC=9;AF=0.161;AN=56;BaseQRankSum=11.375;DP=593;FS=11.045;HRun=0;HaplotypeScore=218.2918;InbreedingCoeff=0.8661;MQ=95.82;MQ0=0;MQRankSum=-10.821;QD=66.59;ReadPosRankSum=2.163;VQSLOD=3.1912;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.31:0,90,5128	1/1:0,9:9:27.09:1104,27,0	0/0:30,0:30:87.29:0,87,4337	0/0:29,0:29:81.18:0,81,3954	0/0:20,0:20:60.21:0,60,3881	0/0:24,0:24:72.23:0,72,4519	0/0:27,0:27:81.25:0,81,4382	0/0:22,0:22:66.19:0,66,3413	0/0:19,0:19:57.20:0,57,3668	1/1:0,18:18:51.15:1890,51,0	1/1:0,14:16:45.15:1793,45,0	0/0:21,0:21:57.17:0,57,3321	0/0:16,0:16:48.16:0,48,3166	0/0:20,0:20:57.20:0,57,3641	0/0:25,0:25:69.21:0,69,4075	0/0:18,0:18:54.17:0,54,3313	1/1:0,16:15:26.93:1104,27,0	0/0:16,0:16:42.14:0,42,2811	0/0:21,0:21:63.18:0,63,3621	0/0:22,0:22:66.23:0,66,4391	0/0:33,0:33:99:0,99,5764	0/0:21,0:21:60.21:0,60,3985	0/0:16,0:16:48.15:0,48,2746	0/0:21,0:21:57.16:0,57,3333	0/0:25,0:25:75.26:0,75,4874	0/1:29,1:30:35.44:35,0,5312	0/0:20,0:20:60.20:0,60,3643	0/0:7,0:7:21.07:0,21,1406
chr10	89142716	.	A	ATG	8626.46	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-14.754;DP=631;FS=22.102;HRun=0;HaplotypeScore=78.5800;InbreedingCoeff=0.9966;MQ=80.23;MQ0=0;MQRankSum=-0.094;QD=41.67;ReadPosRankSum=0.985;VQSLOD=4.1882;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,169,2272	0/0:14,0:14:42.13:0,42,548	0/0:24,0:24:59.97:0,60,746	0/0:9,0:9:15.04:0,15,189	1/1:2,20:23:60.21:1051,60,0	1/1:5,21:26:54.18:946,54,0	1/1:4,22:27:48.16:841,48,0	1/1:5,25:32:84.25:1393,84,0	0/0:21,0:21:57.19:0,57,771	0/0:22,0:22:60.19:0,60,801	0/0:16,0:16:42.14:0,42,567	1/1:2,20:23:48.16:841,48,0	0/0:15,0:15:42.14:0,42,567	1/1:2,15:18:42.14:733,42,0	0/0:11,0:11:27.08:0,27,349	0/0:14,0:14:36.12:0,36,487	0/0:26,0:26:72.24:0,72,973	1/1:3,25:28:75.26:1314,75,0	0/0:21,0:21:45.15:0,45,606	0/0:15,0:15:39.13:0,39,527	0/0:51,0:51:99:0,138,1867	1/1:0,19:19:57.20:998,57,0	0/0:10,0:10:21.07:0,21,281	0/0:41,0:41:99:0,105,1420	1/1:2,9:11:30.10:510,30,0	0/0:18,0:18:48.16:0,48,649	0/0:21,0:21:48.15:0,48,633	0/0:16,0:16:45.15:0,45,608
chr10	89143350	.	T	TAA	478.53	PASS	AB=0.625;AC=15;AF=0.300;AN=50;BaseQRankSum=-3.510;DP=339;FS=3.246;HRun=0;HaplotypeScore=86.1990;InbreedingCoeff=0.7401;MQ=52.74;MQ0=19;MQRankSum=3.241;QD=19.94;ReadPosRankSum=-2.150;VQSLOD=3.4552;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:4:12.04:0,12,172	0/0:26,0:10:20.31:0,20,214	0/0:22,0:12:21.92:0,22,236	1/1:0,4:5:11.97:126,12,0	./.	1/1:3,0:3:5.99:48,6,0	0/1:2,2:4:33.86:107,0,34	1/1:2,0:1:3.01:44,3,0	0/0:20,0:19:57.18:0,57,832	0/0:16,0:15:33.57:0,34,456	./.	0/0:16,0:15:30.88:0,31,390	1/1:2,0:2:6.01:69,6,0	0/0:19,0:19:38.96:0,39,365	0/0:14,0:13:30:0,30,400	0/0:19,0:18:23.31:0,23,285	1/1:1,0:1:2.98:21,3,0	0/0:18,0:15:29.62:0,30,393	0/0:20,0:20:41.97:0,42,569	0/0:15,0:14:32.84:0,33,384	1/1:4,0:4:9.01:141,9,0	0/0:23,0:23:32.66:0,33,332	0/0:12,0:12:11.89:0,12,172	1/1:2,0:2:6.02:85,6,0	0/0:28,0:27:65.11:0,65,785	0/0:21,0:21:45.88:0,46,574	0/0:19,0:17:33.91:0,34,458
chr10	89144668	.	T	TAAACCC	3596.57	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.325;DP=660;FS=9.884;HRun=0;HaplotypeScore=163.4204;InbreedingCoeff=0.9685;MQ=86.50;MQ0=0;MQRankSum=-9.519;QD=55.33;ReadPosRankSum=-0.580;VQSLOD=2.7662;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,15:39:62.40:1807,62,0	0/0:4,0:4:9.03:0,9,197	0/0:27,0:27:48.16:0,48,975	0/0:22,0:22:57.17:0,57,1120	0/0:22,0:22:54.17:0,54,1127	0/0:18,0:18:42.14:0,42,921	0/0:25,0:25:42.11:0,42,822	0/0:22,0:22:54.19:0,54,1171	1/1:9,17:25:60.13:1790,60,0	0/0:25,0:25:66.19:0,66,1402	0/0:15,0:15:42.14:0,42,921	0/0:34,0:34:87.28:0,87,1862	0/0:29,0:29:63.19:0,63,1282	0/0:17,0:17:39.12:0,39,798	0/0:24,0:24:60.19:0,60,1273	0/0:20,0:20:57.15:0,57,1095	0/0:29,0:29:81.28:0,81,1775	0/0:20,0:20:39.13:0,39,854	0/0:16,0:16:30.09:0,30,619	0/0:27,0:27:69.21:0,69,1399	0/0:35,0:35:87.30:0,87,1889	0/0:27,0:27:75.23:0,75,1531	0/0:18,0:18:51.18:0,51,1119	0/0:36,0:36:69.19:0,69,1405	0/0:23,0:23:60.21:0,60,1287	0/0:27,0:27:66.22:0,66,1395	0/0:26,0:26:69.22:0,69,1469	0/0:7,0:7:21.07:0,21,443
chr10	89144683	.	CA	C	7051.64	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=10.920;DP=639;FS=1.392;HRun=5;HaplotypeScore=84.4196;InbreedingCoeff=0.9944;MQ=85.52;MQ0=0;MQRankSum=-2.191;QD=28.21;ReadPosRankSum=1.406;VQSLOD=5.2172;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:63.18:711,63,0	0/0:4,0:4:12.04:0,12,164	0/0:21,0:22:44.16:0,44,577	0/0:23,0:23:59.51:0,60,728	1/1:2,17:19:42.12:476,42,0	1/1:0,16:16:45.13:510,45,0	1/1:1,18:19:39.11:442,39,0	1/1:1,28:29:84.22:935,84,0	1/1:0,22:22:57.16:642,57,0	0/0:29,0:29:84.25:0,84,1104	0/0:19,0:19:51.13:0,51,676	1/1:3,28:31:78.22:885,78,0	0/0:20,0:20:60.20:0,60,821	1/1:0,18:18:48.14:545,48,0	0/0:25,0:25:72.22:0,72,967	0/0:22,0:22:63.21:0,63,862	0/0:37,0:37:99:0,108,1453	1/1:0,18:18:48.14:544,48,0	0/0:19,0:19:57.19:0,57,779	0/0:26,0:26:75.21:0,75,1004	0/0:30,0:30:87.23:0,87,1141	1/1:2,26:28:72.20:816,72,0	0/0:19,0:19:57.19:0,57,773	0/0:29,0:29:78.26:0,78,1066	1/1:4,18:22:48.13:544,48,0	0/0:31,0:31:81.25:0,81,1076	0/0:28,0:28:72.24:0,72,982	0/0:6,0:6:18.06:0,18,246
chr10	89144925	.	AGTTGTT	A	1228.62	PASS	AB=0.600;AC=7;AF=0.125;AN=56;BaseQRankSum=2.856;DP=412;FS=7.079;HRun=0;HaplotypeScore=107.6417;InbreedingCoeff=0.7750;MQ=72.72;MQ0=0;MQRankSum=-2.565;QD=32.33;ReadPosRankSum=1.780;VQSLOD=3.0828;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:21.02:0,21,333	1/1:1,0:1:3.01:49,3,0	0/0:38,0:30:69.23:0,69,1660	0/0:31,0:22:35.68:0,36,876	0/0:14,0:14:9.03:0,9,168	0/0:6,0:6:15.05:0,15,341	0/0:14,0:14:36.12:0,36,717	0/0:27,0:25:63.20:0,63,1185	0/0:11,0:11:12.04:0,12,311	1/1:2,9:11:27.09:544,27,0	1/1:3,11:14:24.08:478,24,0	0/0:14,0:14:33.11:0,33,768	0/0:10,0:10:30.10:0,30,943	0/0:6,0:6:15.05:0,15,388	0/0:15,0:15:45.15:0,45,1426	0/0:16,0:16:45.15:0,45,1155	0/1:4,8:11:1.94:296,0,2	0/0:12,0:12:6.02:0,6,156	0/0:17,0:17:42.13:0,42,1204	0/0:16,0:16:39.13:0,39,1213	0/0:15,0:15:39.13:0,39,1310	0/0:19,0:19:21.07:0,21,457	0/0:9,0:9:18.06:0,18,567	0/0:17,0:17:45.15:0,45,1357	0/0:9,0:9:27.09:0,27,591	0/0:12,0:12:33.11:0,33,1065	0/0:22,0:22:54.19:0,54,1617	0/0:4,0:4:12.04:0,12,410
chr10	89144937	.	T	TTTGTTGTTGTTG	6994.81	PASS	AB=0.699;AC=20;AF=0.357;AN=56;BaseQRankSum=5.289;DP=462;FS=4.164;HRun=0;HaplotypeScore=133.2968;InbreedingCoeff=0.6725;MQ=61.95;MQ0=2;MQRankSum=-8.961;QD=34.29;ReadPosRankSum=-0.631;VQSLOD=4.3685;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:23:14.97:405,15,0	0/0:1,0:1:3.01:0,3,36	0/0:44,0:26:75.20:0,75,2064	0/0:27,0:18:23.99:0,24,898	1/1:2,1:18:9.54:272,10,0	1/1:2,1:12:14.71:484,15,0	1/1:7,0:14:42.08:744,42,0	0/1:19,0:26:74.70:728,0,75	1/1:0,0:16:12.04:453,12,0	0/0:11,0:11:11.66:0,12,500	0/0:13,0:13:14.62:0,15,469	1/1:1,0:19:13.14:1426,13,0	0/0:13,0:13:39.13:0,39,1210	1/1:0,1:9:15.05:742,15,0	0/0:15,0:15:45.15:0,45,1604	0/0:17,0:17:51.16:0,51,1347	0/1:12,0:11:39.37:39,0,334	0/1:1,0:15:12.95:288,0,13	0/0:17,0:17:45.14:0,45,1393	0/0:15,0:15:42.13:0,42,1434	0/0:16,0:16:45.15:0,45,1556	0/1:2,0:23:0.46:669,0,0	0/0:9,0:9:24.05:0,24,718	0/0:20,0:20:54.12:0,54,1648	1/1:6,0:15:42:744,42,0	0/0:14,0:14:39.12:0,39,1287	0/0:22,0:22:60.18:0,60,1915	0/0:4,0:4:12.04:0,12,474
chr10	89144941	.	G	GTT	1543.62	PASS	AB=0.885;AC=14;AF=0.250;AN=56;BaseQRankSum=8.760;DP=453;FS=1.175;HRun=2;HaplotypeScore=83.0756;InbreedingCoeff=0.1924;MQ=57.21;MQ0=4;MQRankSum=-9.084;QD=8.62;ReadPosRankSum=2.639;VQSLOD=0.7862;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,2:20:18.48:119,0,18	0/0:1,0:1:3.01:0,3,46	0/0:48,0:29:84.72:0,85,1264	0/0:25,0:17:36.09:0,36,519	0/1:17,0:17:38.74:50,0,39	1/1:10,0:10:9:78,9,0	0/1:10,3:16:99:234,0,180	0/1:15,7:21:99:448,0,202	1/1:14,0:14:12.03:123,12,0	0/0:13,0:13:32.96:0,33,322	0/0:15,0:15:29.98:0,30,303	0/1:19,0:19:29.59:176,0,30	0/0:15,0:15:45.12:0,45,662	1/1:9,0:9:15:130,15,0	0/0:14,0:14:42.14:0,42,680	0/0:15,0:15:43.39:0,43,660	0/0:12,0:11:24.01:0,24,260	0/1:15,0:15:25.95:40,0,26	0/0:16,0:16:45.15:0,45,712	0/0:15,0:15:42.14:0,42,673	0/0:16,0:16:45.15:0,45,723	0/1:20,0:21:18.77:86,0,19	0/0:9,0:9:24.06:0,24,355	0/0:20,0:20:51.16:0,51,792	0/1:10,2:15:99:230,0,205	0/0:13,0:13:39.13:0,39,620	0/0:23,0:23:63.18:0,63,955	0/0:4,0:4:12.04:0,12,195
chr10	89147204	.	G	GA	2204.07	PASS	AB=0.824;AC=12;AF=0.214;AN=56;BaseQRankSum=0.550;DP=597;FS=3.894;HRun=11;HaplotypeScore=70.5898;InbreedingCoeff=0.7747;MQ=68.91;MQ0=3;MQRankSum=0.054;QD=14.60;ReadPosRankSum=0.026;VQSLOD=4.0749;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,24:34:30.86:494,31,0	0/1:5,5:11:25.58:115,0,26	0/0:25,0:23:34.56:0,35,221	0/1:20,0:13:27.55:28,0,45	0/0:27,0:27:56.47:0,56,439	0/0:17,0:17:41.83:0,42,325	0/0:20,0:20:27.90:0,28,268	0/0:41,0:41:75.84:0,76,581	1/1:2,8:11:17.71:163,18,0	1/1:4,19:23:33.79:489,34,0	1/1:2,14:17:39.38:381,39,0	0/0:19,0:19:41.82:0,42,324	0/0:18,0:19:49.85:0,50,377	0/0:13,0:14:30.16:0,30,217	0/0:25,0:26:39.60:0,40,445	0/0:20,0:20:52.84:0,53,400	1/1:5,28:34:71.98:715,72,0	0/0:24,0:24:54.60:0,55,413	0/0:17,0:17:36.42:0,36,259	0/0:23,2:25:35.29:0,35,457	0/0:17,0:18:37.85:0,38,284	0/0:13,0:13:35.25:0,35,263	0/0:21,2:23:11.35:0,11,271	0/0:16,0:17:43.87:0,44,331	0/0:11,0:12:16.93:0,17,122	0/0:32,2:35:30.92:0,31,594	0/0:22,0:22:48.88:0,49,360	0/0:6,0:6:14.94:0,15,116
chr10	89149486	.	G	GC	17223.56	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-17.949;DP=737;FS=3.106;HRun=0;HaplotypeScore=65.4224;InbreedingCoeff=0.9999;MQ=88.95;MQ0=0;MQRankSum=-3.773;QD=43.71;ReadPosRankSum=2.531;VQSLOD=5.4841;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,49:49:99:2157,135,0	1/1:1,10:11:30.10:479,30,0	0/0:25,0:25:75.18:0,75,978	0/0:36,0:36:99:0,102,1328	1/1:0,24:24:66.22:1046,66,0	1/1:1,23:24:63.21:1007,63,0	1/1:1,29:30:84.29:1342,84,0	1/1:0,32:32:93.28:1439,93,0	1/1:0,28:28:81.28:1294,81,0	1/1:0,27:28:84.26:1308,84,0	1/1:0,17:17:48.16:766,48,0	1/1:0,23:23:66.23:1054,66,0	0/0:21,0:21:63.21:0,63,879	1/1:0,26:26:75.26:1194,75,0	0/0:26,0:26:78.25:0,78,1073	0/0:24,0:24:72.21:0,72,972	1/1:1,28:29:75.15:1166,75,0	1/1:0,28:28:78.27:1246,78,0	0/0:21,0:21:60.18:0,60,803	0/0:14,0:14:39.13:0,39,544	0/0:51,0:51:99:0,144,1995	1/1:0,23:23:60.20:957,60,0	0/0:22,0:22:54.13:0,54,692	0/0:32,0:32:93.28:0,93,1279	1/1:0,22:22:48.16:767,48,0	0/0:31,1:32:42.32:0,42,1153	0/0:28,0:28:84.25:0,84,1139	0/0:11,0:11:33.11:0,33,461
chr10	89152050	.	A	AT	1522.19	PASS	AB=0.955;AC=10;AF=0.179;AN=56;BaseQRankSum=-7.826;DP=441;FS=3.258;HRun=9;HaplotypeScore=40.4212;InbreedingCoeff=0.7269;MQ=67.63;MQ0=5;MQRankSum=0.087;QD=14.23;ReadPosRankSum=0.675;VQSLOD=3.0328;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:83.96:0,84,725	1/1:0,7:7:15.04:166,15,0	0/1:29,0:9:3.95:4,0,50	0/0:29,0:13:1.63:0,2,45	0/0:17,0:17:44.96:0,45,383	0/0:12,0:12:35.99:0,36,312	0/1:9,1:10:5.95:6,0,173	0/0:23,0:23:47.94:0,48,413	0/0:6,0:6:12:0,12,104	1/1:4,18:22:31.10:571,31,0	1/1:2,14:16:39.11:431,39,0	0/0:6,0:6:18:0,18,156	0/0:10,0:10:23.97:0,24,205	0/0:11,0:11:32.98:0,33,282	0/0:10,0:10:29.99:0,30,260	0/0:11,0:11:23.99:0,24,208	1/1:2,21:23:25.08:505,25,0	0/0:26,0:26:68.98:0,69,599	0/0:23,0:23:50.95:0,51,442	0/0:14,0:14:35.98:0,36,312	0/0:6,0:6:18:0,18,156	0/0:4,0:4:8.99:0,9,78	0/0:3,0:3:9:0,9,78	0/0:11,0:11:23.99:0,24,208	0/0:27,1:28:47.80:0,48,643	0/0:25,0:25:42.47:0,42,546	0/0:18,0:18:44.98:0,45,391	0/0:11,0:11:32.89:0,33,271
chr10	89153139	.	C	CAG	1034.15	PASS	AB=0.949;AC=35;AF=0.700;AN=50;BaseQRankSum=2.297;DP=633;FS=29.376;HRun=0;HaplotypeScore=113.2237;InbreedingCoeff=0.0677;MQ=67.30;MQ0=12;MQRankSum=-3.324;QD=2.34;ReadPosRankSum=-1.081;VQSLOD=0.6012;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:26:6.01:68,6,0	1/1:11,0:11:2.98:28,3,0	./.	./.	1/1:17,0:17:4.72:16,5,0	1/1:32,0:31:11.82:96,12,0	1/1:18,0:18:8.33:52,8,0	1/1:36,0:36:11.75:72,12,0	1/1:23,0:23:15:134,15,0	1/1:19,0:19:10.84:61,11,0	0/1:12,0:12:16.40:16,0,25	1/1:24,0:22:2.74:12,3,0	0/0:25,0:28:26.24:0,26,212	1/1:14,0:13:3:26,3,0	0/1:17,5:23:54.55:74,0,55	0/1:17,0:18:21.77:22,0,36	0/1:19,0:19:47.42:47,0,86	1/1:12,0:12:6.01:68,6,0	0/0:22,0:21:9:0,9,88	0/1:21,0:21:23.02:72,0,23	0/1:21,0:21:2.09:93,0,2	./.	0/1:12,5:18:15.56:36,0,16	0/0:32,0:32:7.89:0,8,210	1/1:13,0:13:3.01:41,3,0	0/1:28,0:29:0.38:0,0,110	0/1:29,0:29:3.23:145,0,3	1/1:6,0:6:0.94:2,1,0
chr10	89153184	.	A	AGAGAGAGGG	1245.27	PASS	AB=0.884;AC=14;AF=0.250;AN=56;BaseQRankSum=2.287;DP=694;FS=12.992;HRun=0;HaplotypeScore=219.4811;InbreedingCoeff=-0.1710;MQ=63.97;MQ0=8;MQRankSum=-5.890;QD=3.51;ReadPosRankSum=-5.214;VQSLOD=0.1822;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:35:87.68:154,0,88	0/0:17,0:18:5.79:0,6,70	0/0:28,0:17:46.93:0,47,702	0/0:23,0:13:35.73:0,36,522	0/1:29,0:29:54.03:54,0,97	0/0:28,0:27:31.16:0,31,136	0/1:29,0:29:36.54:160,0,37	0/1:45,0:45:93.33:106,0,93	0/1:7,0:25:5.03:406,0,5	0/1:4,0:21:59.04:73,0,59	0/0:11,0:12:15.33:0,15,131	1/1:4,1:31:2.65:54,3,0	0/0:31,0:31:71.72:0,72,1404	0/1:17,0:16:25.10:32,0,25	0/0:20,0:20:36.10:0,36,643	0/0:18,0:20:54.11:0,54,920	0/1:20,0:21:32.05:32,0,206	0/1:3,0:14:16.68:181,0,17	0/0:22,0:22:16.84:0,17,862	0/1:24,0:24:29.77:30,0,724	0/1:33,0:33:93.99:94,0,851	0/0:23,0:23:18.48:0,18,65	0/0:21,0:21:30.10:0,30,566	0/0:32,0:32:50.41:0,50,1079	0/1:28,0:28:24.57:25,0,104	0/0:29,0:29:11.66:0,12,953	0/0:20,0:20:44.79:0,45,739	0/0:12,0:10:13.86:0,14,257
chr10	89154674	.	GATGGGTGCATGGGTGC	G	1995.20	PASS	AB=0.966;AC=19;AF=0.365;AN=52;BaseQRankSum=4.392;DP=689;FS=6.455;HRun=0;HaplotypeScore=266.0523;InbreedingCoeff=0.7263;MQ=70.32;MQ0=2;MQRankSum=-3.989;QD=7.59;ReadPosRankSum=1.208;VQSLOD=1.8201;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:40,13:53:6.02:74,6,0	0/0:12,0:12:18.06:0,18,912	./.	./.	1/1:6,9:15:6.02:124,6,0	1/1:19,12:31:6.02:167,6,0	0/1:27,0:28:35.31:205,0,35	0/0:28,0:28:0:0,0,0	1/1:14,9:23:6.02:252,6,0	0/0:15,0:15:21.06:0,21,883	0/0:13,0:13:15.05:0,15,672	1/1:16,15:31:6.02:219,6,0	0/0:28,0:28:48.15:0,48,2519	1/1:10,16:26:12.04:472,12,0	0/0:29,0:29:45.15:0,45,2367	0/0:30,0:30:48.15:0,48,2619	0/0:37,0:37:27.09:0,27,1656	1/1:11,10:21:6.02:259,6,0	0/0:21,0:20:15.05:0,15,481	0/0:27,0:27:24.03:0,24,830	0/0:39,0:39:42.32:0,42,1836	1/1:12,7:19:11.98:128,12,0	0/0:10,0:10:3.01:0,3,214	0/0:30,0:30:39.09:0,39,2022	1/1:16,0:16:15.03:276,15,0	0/0:29,0:29:42.14:0,42,2073	0/0:13,0:13:18.04:0,18,658	0/0:12,0:12:6.02:0,6,340
chr10	89157728	.	G	GT	3713.31	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.138;DP=659;FS=2.566;HRun=1;HaplotypeScore=64.6881;InbreedingCoeff=0.9987;MQ=80.20;MQ0=0;MQRankSum=0.067;QD=39.93;ReadPosRankSum=2.419;VQSLOD=4.4545;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,156,2131	1/1:0,10:10:27.09:413,27,0	0/0:21,0:21:34.31:0,34,674	0/0:24,0:23:65.98:0,66,774	0/0:22,0:22:66.21:0,66,904	0/0:19,0:19:54.17:0,54,733	0/0:28,0:28:78.23:0,78,1043	0/0:20,0:20:57.16:0,57,732	0/0:25,0:25:72.20:0,72,943	1/1:0,32:32:96.33:1468,96,0	1/1:0,12:12:24.08:364,24,0	0/0:19,0:19:57.17:0,57,776	0/0:12,0:12:36.12:0,36,493	0/0:17,0:17:51.17:0,51,708	0/0:18,0:18:51.15:0,51,674	0/0:17,0:17:51.13:0,51,649	1/1:0,39:39:96.33:1469,96,0	0/0:21,0:21:63.20:0,63,857	0/0:27,0:27:78.21:0,78,1036	0/0:24,0:24:69.20:0,69,907	0/0:44,0:44:99:0,132,1761	0/0:21,0:21:63.18:0,63,839	0/0:23,0:23:69.20:0,69,918	0/0:21,0:21:54.17:0,54,739	0/0:28,0:28:81.25:0,81,1091	0/0:23,1:24:26.29:0,26,896	0/0:27,0:27:78.25:0,78,1066	0/0:12,0:12:36.12:0,36,498
chr10	89157947	.	GTGT	G	11271.69	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=20.490;DP=897;FS=10.862;HRun=0;HaplotypeScore=153.6715;InbreedingCoeff=0.9999;MQ=88.77;MQ0=4;MQRankSum=-4.806;QD=45.45;ReadPosRankSum=4.167;VQSLOD=5.9835;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,181,4084	0/0:13,0:13:36.12:0,36,845	0/0:40,0:40:99:0,108,2412	0/0:30,0:30:75.10:0,75,1714	1/1:0,32:32:69.68:1218,70,0	1/1:3,18:19:51.15:868,51,0	1/1:0,26:26:78.27:1375,78,0	1/1:1,29:30:90.29:1547,90,0	0/0:38,0:38:99:0,114,2650	0/0:54,0:54:99:0,163,3750	0/0:20,0:20:60.21:0,60,1391	1/1:1,26:27:75.26:1323,75,0	0/0:30,1:31:40.38:0,40,2048	1/1:0,28:28:75.26:1323,75,0	0/0:32,0:32:96.33:0,96,2247	0/0:35,0:35:99:0,99,2335	0/0:46,0:46:99:0,138,3240	1/1:0,30:29:81.24:1397,81,0	0/0:28,0:28:84.29:0,84,1966	0/0:20,0:20:57.20:0,57,1345	0/0:52,0:52:99:0,154,3590	1/1:0,32:32:78.27:1375,78,0	0/0:25,0:25:69.24:0,69,1629	0/0:45,0:45:99:0,132,3064	1/1:0,22:20:48.16:847,48,0	0/0:42,0:42:99:0,120,2839	0/0:27,0:27:81.28:0,81,1870	0/0:10,0:10:30.10:0,30,701
chr10	89159819	.	TA	T	4344.19	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=10.959;DP=433;FS=0.000;HRun=11;HaplotypeScore=49.3639;InbreedingCoeff=0.8646;MQ=56.06;MQ0=8;MQRankSum=-0.567;QD=16.15;ReadPosRankSum=1.200;VQSLOD=5.2082;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:29:73.95:597,74,0	1/1:0,1:1:3:25,3,0	0/0:9,0:1:2.94:0,3,18	0/0:6,0:4:2.96:0,3,20	1/1:8,24:32:67.80:534,68,0	1/1:6,12:17:32.95:271,33,0	1/1:2,4:6:8.99:74,9,0	1/1:6,18:20:44.89:364,45,0	1/1:3,20:23:16.05:332,16,0	1/1:10,14:23:12.96:313,13,0	1/1:4,3:6:8.99:74,9,0	1/1:5,10:15:29.95:246,30,0	0/0:13,0:13:24.04:0,24,247	1/1:4,7:11:20.97:172,21,0	0/0:12,0:12:30.08:0,30,320	0/0:6,0:6:11.99:0,12,115	1/1:5,25:30:62.92:517,63,0	1/1:5,24:29:57.95:526,58,0	0/0:17,1:16:14.40:0,14,336	0/0:15,0:14:36.09:0,36,384	0/0:9,0:9:24.03:0,24,241	1/1:1,5:6:11.98:98,12,0	0/0:13,1:12:2.44:0,2,224	0/0:6,0:6:15.04:0,15,160	1/1:2,8:10:26:203,26,0	0/0:20,0:20:18.91:0,19,393	0/0:21,0:20:54.10:0,54,553	0/0:15,0:13:27.07:0,27,288
chr10	89159918	.	G	GA	4014.15	PASS	AB=0.582;AC=20;AF=0.357;AN=56;BaseQRankSum=13.655;DP=442;FS=2.488;HRun=7;HaplotypeScore=60.8570;InbreedingCoeff=0.8297;MQ=61.18;MQ0=9;MQRankSum=-1.687;QD=19.58;ReadPosRankSum=0.607;VQSLOD=3.3198;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:27:59.88:663,60,0	0/0:2,0:2:3:0,3,29	0/0:11,0:4:11.81:0,12,100	0/0:14,0:10:23.40:0,23,208	1/1:7,10:16:36.98:379,37,0	1/1:1,9:11:20.89:225,21,0	1/1:3,10:13:18.05:212,18,0	1/1:21,9:30:30.45:456,30,0	1/1:15,13:28:56.81:603,57,0	0/0:13,0:12:30.04:0,30,289	0/0:13,0:13:39.05:0,39,371	0/1:5,11:15:13.80:218,0,14	0/0:10,0:10:10.15:0,10,241	1/1:10,6:15:26.10:280,26,0	0/0:13,0:13:33:0,33,305	0/0:12,1:13:30.93:0,31,292	0/0:28,0:28:75.11:0,75,724	1/1:11,15:27:62.36:659,62,0	0/0:22,0:20:51.02:0,51,482	0/0:11,0:11:30.04:0,30,284	0/0:16,0:16:42.06:0,42,405	0/1:1,3:4:2.90:94,0,3	0/0:11,0:11:30.05:0,30,290	0/0:18,0:18:54.09:0,54,520	1/1:6,5:11:10.53:226,11,0	0/0:17,0:17:42.07:0,42,405	0/0:16,0:15:39.03:0,39,363	0/0:9,0:9:24.03:0,24,232
chr10	89160172	.	TTGG	T	361.48	PASS	AB=0.824;AC=3;AF=0.054;AN=56;BaseQRankSum=7.744;DP=593;FS=3.906;HRun=0;HaplotypeScore=136.4457;InbreedingCoeff=0.8169;MQ=60.04;MQ0=10;MQRankSum=-7.053;QD=9.51;ReadPosRankSum=0.347;VQSLOD=3.1397;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,6:22:41.07:313,41,0	0/0:8,0:8:21.07:0,21,412	0/0:32,0:15:35.74:0,36,613	0/0:46,0:27:78.26:0,78,1482	0/0:23,0:23:63.18:0,63,1244	0/0:21,0:21:63.19:0,63,1295	0/0:26,0:26:69.19:0,69,1482	0/0:19,0:17:45.15:0,45,913	0/1:11,3:14:1.34:155,0,1	0/0:17,0:17:48.07:0,48,920	0/0:16,0:16:48.14:0,48,970	0/0:23,0:23:64.36:0,64,1205	0/0:24,0:24:72.25:0,72,1586	0/0:22,0:22:60.96:0,61,1059	0/0:22,0:22:66.23:0,66,1434	0/0:10,0:10:30.09:0,30,628	0/0:33,0:33:86.88:0,87,1929	0/0:27,0:27:66.23:0,66,1388	0/0:25,0:22:66.21:0,66,1265	0/0:14,0:14:42.14:0,42,926	0/0:19,0:19:57.20:0,57,1217	0/0:11,0:11:30.10:0,30,644	0/0:16,0:16:48.16:0,48,1032	0/0:29,0:29:75.52:0,76,1787	0/0:18,0:18:43.39:0,43,877	0/0:20,0:20:60.20:0,60,1277	0/0:23,0:23:69.22:0,69,1494	0/0:11,0:11:24.08:0,24,535
chr10	89160173	.	T	TTC	624.79	PASS	AB=0.767;AC=3;AF=0.054;AN=56;BaseQRankSum=6.108;DP=581;FS=1.924;HRun=0;HaplotypeScore=125.9291;InbreedingCoeff=0.6441;MQ=60.03;MQ0=10;MQRankSum=-6.099;QD=18.38;ReadPosRankSum=0.454;VQSLOD=4.0022;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,7:21:42.19:255,0,42	0/0:8,0:8:21.07:0,21,323	0/0:30,0:14:33.54:0,34,452	0/0:47,0:27:77.76:0,78,1216	0/0:23,0:23:63.20:0,63,989	0/0:21,0:21:63.20:0,63,1002	0/0:24,0:24:69.19:0,69,1096	0/0:19,0:17:45.09:0,45,701	1/1:3,8:11:31.24:476,31,0	0/0:17,0:17:45.11:0,45,684	0/0:16,0:16:48.14:0,48,756	0/0:23,0:23:64.36:0,64,966	0/0:24,0:24:72.25:0,72,1165	0/0:21,0:21:60.70:0,61,854	0/0:22,0:22:66.23:0,66,1073	0/0:10,0:10:30.09:0,30,466	0/0:32,0:32:93.31:0,93,1493	0/0:27,0:27:66.23:0,66,1071	0/0:25,0:22:66.17:0,66,949	0/0:14,0:14:42.14:0,42,664	0/0:19,0:19:57.15:0,57,857	0/0:11,0:11:30.10:0,30,485	0/0:17,0:17:48.11:0,48,753	0/0:29,0:29:83.95:0,84,1310	0/0:17,0:17:43.39:0,43,686	0/0:20,0:20:60.20:0,60,948	0/0:23,0:23:69.22:0,69,1096	0/0:8,0:8:24.08:0,24,391
chr10	89160183	.	GT	G	64.59	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.203;DP=566;FS=0.000;HRun=7;HaplotypeScore=115.6747;InbreedingCoeff=0.9812;MQ=58.64;MQ0=15;MQRankSum=-7.677;QD=2.23;ReadPosRankSum=0.596;VQSLOD=-0.5482;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,6:16:14.62:76,15,0	0/0:7,0:7:17.96:0,18,194	0/0:23,0:11:20.88:0,21,276	0/0:35,0:18:42.12:0,42,598	0/0:22,0:22:48.10:0,48,613	0/0:20,0:20:54.11:0,54,738	0/0:23,0:23:66.21:0,66,922	0/0:25,0:18:48:0,48,591	1/1:7,4:11:21.46:106,21,0	0/0:16,0:16:44.83:0,45,457	0/0:16,0:16:47.91:0,48,481	0/0:22,0:21:51.15:0,51,641	0/0:26,0:25:72.24:0,72,1032	0/0:18,0:18:45.13:0,45,560	0/0:21,0:21:63.21:0,63,904	0/0:14,0:14:42.10:0,42,562	0/0:37,0:35:99:0,101,1124	0/0:25,0:25:49.07:0,49,720	0/0:21,0:18:54.12:0,54,725	0/0:16,0:16:45.15:0,45,639	0/0:20,0:20:60.20:0,60,860	0/0:11,0:11:30.10:0,30,410	0/0:17,0:17:48.16:0,48,683	0/0:31,0:31:76.40:0,76,1222	0/0:17,0:17:42.13:0,42,539	0/0:23,0:23:69.22:0,69,970	0/0:23,0:23:60.20:0,60,854	0/0:8,0:8:24.08:0,24,341
chr10	89160184	.	T	TTG	989.02	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.576;DP=568;FS=2.586;HRun=0;HaplotypeScore=124.2877;InbreedingCoeff=0.9922;MQ=58.59;MQ0=16;MQRankSum=-7.800;QD=34.10;ReadPosRankSum=0.362;VQSLOD=5.3652;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,6:16:38.98:702,39,0	0/0:7,0:7:18.06:0,18,266	0/0:22,0:11:21.03:0,21,275	0/0:33,0:18:54.12:0,54,716	0/0:23,0:23:48.11:0,48,678	0/0:21,0:21:54.18:0,54,826	0/0:23,0:23:66.21:0,66,990	0/0:27,0:18:48.13:0,48,662	1/1:11,0:11:32.56:408,33,0	0/0:16,0:16:45.15:0,45,650	0/0:16,0:16:48.15:0,48,682	0/0:21,0:20:51.17:0,51,756	0/0:26,0:25:72.24:0,72,1098	0/0:18,0:18:45.15:0,45,648	0/0:21,0:21:63.21:0,63,965	0/0:14,0:14:42.10:0,42,594	0/0:40,0:38:57.49:0,57,1348	0/0:25,0:25:55.16:0,55,796	0/0:22,0:19:54.12:0,54,773	0/0:15,0:15:45.15:0,45,669	0/0:20,0:20:60.20:0,60,919	0/0:11,0:11:30.10:0,30,447	0/0:17,0:17:48.16:0,48,725	0/0:30,0:30:85.82:0,86,1309	0/0:17,0:17:42.14:0,42,632	0/0:24,0:24:69.23:0,69,1019	0/0:22,0:22:60.20:0,60,898	0/0:8,0:8:24.08:0,24,368
chr10	89160187	.	GT	G	163.70	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.537;DP=569;FS=6.358;HRun=3;HaplotypeScore=115.2679;InbreedingCoeff=0.9921;MQ=55.66;MQ0=17;MQRankSum=-7.725;QD=5.64;ReadPosRankSum=1.013;VQSLOD=0.3243;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,6:16:22.84:125,23,0	0/0:8,0:8:21:0,21,236	0/0:17,0:8:20.79:0,21,267	0/0:33,0:18:48.16:0,48,671	0/0:21,0:21:42.58:0,43,535	0/0:22,0:22:54.17:0,54,750	0/0:22,0:22:63.21:0,63,903	0/0:28,0:19:48.55:0,49,653	1/1:6,5:11:25.48:159,25,0	0/0:15,0:15:44.90:0,45,482	0/0:16,0:16:44.95:0,45,457	0/0:21,0:20:51.15:0,51,642	0/0:25,0:24:69.23:0,69,993	0/0:17,0:17:42.12:0,42,519	0/0:21,0:21:63.20:0,63,891	0/0:13,0:13:39.13:0,39,559	0/0:40,0:38:99:0,105,1214	0/0:26,0:26:54.16:0,54,735	0/0:26,0:22:63.18:0,63,849	0/0:15,0:15:39.13:0,39,561	0/0:22,0:22:66.22:0,66,940	0/0:12,0:12:29.93:0,30,395	0/0:17,0:17:51.17:0,51,731	0/0:30,0:30:63.55:0,64,1175	0/0:17,0:17:42.13:0,42,540	0/0:26,0:26:72.23:0,72,1011	0/0:21,0:21:60.18:0,60,824	0/0:8,0:8:24.08:0,24,341
chr10	89160188	.	T	TTG	711.94	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.796;DP=568;FS=3.568;HRun=0;HaplotypeScore=124.5297;InbreedingCoeff=0.9939;MQ=55.50;MQ0=18;MQRankSum=-8.277;QD=24.55;ReadPosRankSum=0.285;VQSLOD=4.3544;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,4:16:44.25:397,44,0	0/0:8,0:8:21.07:0,21,305	0/0:18,0:8:20.96:0,21,285	0/0:32,0:17:48.16:0,48,723	0/0:20,0:20:42.59:0,43,605	0/0:22,0:22:54.18:0,54,825	0/0:22,0:22:63.21:0,63,960	0/0:29,0:20:29.53:0,30,665	1/1:6,5:11:32.96:436,33,0	0/0:16,0:15:45.15:0,45,658	0/0:15,0:15:45.14:0,45,647	0/0:21,0:20:51.17:0,51,767	0/0:26,0:25:69.23:0,69,1057	0/0:17,0:17:42.14:0,42,624	0/0:21,0:21:63.21:0,63,946	0/0:13,0:13:39.13:0,39,597	0/0:40,0:38:99:0,101,1445	0/0:27,0:27:55.06:0,55,800	0/0:25,0:21:63.18:0,63,899	0/0:14,0:14:39.13:0,39,597	0/0:23,0:23:66.22:0,66,991	0/0:12,0:12:30.06:0,30,433	0/0:17,0:17:51.17:0,51,776	0/0:29,0:29:85.84:0,86,1283	0/0:17,0:17:45.11:0,45,654	0/0:27,0:27:72.23:0,72,1068	0/0:20,0:20:60.18:0,60,872	0/0:8,0:8:24.08:0,24,363
chr10	89160191	.	GT	G	55.16	PASS	AB=0.692;AC=3;AF=0.054;AN=56;BaseQRankSum=6.782;DP=572;FS=2.071;HRun=3;HaplotypeScore=115.4355;InbreedingCoeff=0.5026;MQ=55.47;MQ0=20;MQRankSum=-5.800;QD=1.97;ReadPosRankSum=-0.319;VQSLOD=-0.3714;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,8:17:30.21:30,0,106	0/0:8,0:8:20.88:0,21,182	0/0:17,0:7:14.88:0,15,212	0/0:30,0:16:42.20:0,42,551	0/0:21,0:21:51.03:0,51,613	0/0:23,0:23:54.16:0,54,744	0/0:22,0:22:60.17:0,60,826	0/0:28,0:18:43.08:0,43,598	1/1:2,8:10:4.39:118,4,0	0/0:17,0:16:41.69:0,42,379	0/0:16,0:16:24.26:0,24,358	0/0:22,0:21:51.01:0,51,564	0/0:25,0:24:72.24:0,72,1033	0/0:18,0:18:42.01:0,42,452	0/0:20,0:20:60.20:0,60,863	0/0:13,0:13:39.13:0,39,559	0/0:39,0:37:99:0,100,854	0/0:27,0:27:51.16:0,51,700	0/0:27,0:22:63.17:0,63,849	0/0:13,0:13:39.13:0,39,562	0/0:23,0:23:63.21:0,63,899	0/0:12,0:12:30.08:0,30,397	0/0:19,0:19:57.18:0,57,786	0/0:29,0:29:57.26:0,57,1137	0/0:20,0:20:45.05:0,45,512	0/0:25,0:25:72.24:0,72,1018	0/0:20,0:20:60.18:0,60,836	0/0:10,0:10:24.04:0,24,301
chr10	89160196	.	TTTGGTTGG	T	2944.10	PASS	AB=0.703;AC=19;AF=0.365;AN=52;BaseQRankSum=8.026;DP=569;FS=2.760;HRun=0;HaplotypeScore=177.0760;InbreedingCoeff=0.8282;MQ=55.75;MQ0=21;MQRankSum=-7.883;QD=15.02;ReadPosRankSum=1.566;VQSLOD=2.7129;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:17:11.95:125,12,0	0/0:6,0:7:9.03:0,9,279	./.	./.	1/1:10,13:23:27.06:475,27,0	1/1:16,8:24:6.02:149,6,0	1/1:21,0:21:9.01:96,9,0	0/0:27,0:16:0:0,0,0	1/1:10,0:10:14.86:186,15,0	0/0:16,0:15:24.07:0,24,555	0/0:15,0:16:21.07:0,21,556	1/1:8,13:20:27.09:669,27,0	0/0:25,0:24:39.13:0,39,1351	1/1:6,15:21:23.93:593,24,0	0/0:20,0:20:30.10:0,30,928	0/0:15,0:15:33.11:0,33,1069	0/0:33,0:38:69.24:0,69,1906	0/1:15,11:26:99:136,0,145	0/0:26,0:21:36.12:0,36,1109	0/0:15,0:15:24.08:0,24,740	0/0:23,0:23:48.16:0,48,1606	1/1:8,4:12:6.02:135,6,0	0/0:19,0:19:33.09:0,33,952	0/0:30,0:30:63.20:0,63,1944	1/1:7,13:20:24.08:575,24,0	0/0:27,0:27:45.12:0,45,1260	0/0:20,0:20:39.13:0,39,1091	0/0:7,0:7:18.06:0,18,509
chr10	89160197	.	TTG	T	43.17	PASS	AB=0.693;AC=2;AF=0.036;AN=56;BaseQRankSum=8.833;DP=565;FS=0.000;HRun=0;HaplotypeScore=124.7698;InbreedingCoeff=-0.0426;MQ=54.72;MQ0=22;MQRankSum=-8.663;QD=1.54;ReadPosRankSum=4.345;VQSLOD=2.0743;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,7:17:62.94:63,0,88	0/0:7,0:7:18:0,18,214	0/0:12,0:4:9.03:0,9,137	0/0:28,0:16:42.11:0,42,580	0/0:23,0:23:39.94:0,40,510	0/0:24,0:24:47.15:0,47,717	0/0:21,0:21:60.19:0,60,878	0/0:26,0:15:45.14:0,45,658	0/1:5,5:10:40.09:69,0,40	0/0:16,0:15:44.88:0,45,558	0/0:16,0:16:47.95:0,48,488	0/0:21,0:20:16.99:0,17,309	0/0:25,0:24:72.25:0,72,1256	0/0:20,0:20:8.66:0,9,178	0/0:20,0:20:60.20:0,60,1008	0/0:15,0:15:45.15:0,45,814	0/0:40,0:38:99:0,106,1302	0/0:26,0:26:42.13:0,42,656	0/0:26,0:21:60.20:0,60,987	0/0:15,0:15:45.14:0,45,755	0/0:23,0:23:69.24:0,69,1229	0/0:12,0:12:23.26:0,23,324	0/0:19,0:19:56.93:0,57,951	0/0:29,0:29:86.32:0,86,1534	0/0:20,0:20:21.17:0,21,333	0/0:27,0:27:78.26:0,78,1286	0/0:20,0:20:60.20:0,60,1029	0/0:6,0:6:18.06:0,18,340
chr10	89160202	.	TGG	T	685.30	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=11.840;DP=553;FS=7.312;HRun=2;HaplotypeScore=114.0992;InbreedingCoeff=0.4831;MQ=53.74;MQ0=24;MQRankSum=-10.442;QD=8.46;ReadPosRankSum=4.652;VQSLOD=0.5805;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,11:13:33.09:457,33,0	0/0:7,0:7:18.06:0,18,297	0/0:9,0:4:9.03:0,9,132	0/0:29,0:11:25.56:0,26,371	0/0:22,0:22:6.94:0,7,385	0/0:23,0:23:35.82:0,36,629	0/0:20,0:20:53.76:0,54,712	0/0:27,0:17:43.37:0,43,626	1/1:2,6:8:24.05:314,24,0	0/0:14,0:13:39.13:0,39,694	0/0:14,0:14:42.14:0,42,682	0/1:20,0:19:21.81:22,0,220	0/0:26,0:25:75.26:0,75,1303	0/1:20,0:20:22.55:23,0,143	0/0:18,0:18:54.17:0,54,923	0/0:16,0:16:48.16:0,48,886	0/0:39,0:37:93.09:0,93,1734	0/0:25,0:25:31.69:0,32,582	0/0:29,0:21:63.18:0,63,1063	0/0:17,0:17:51.17:0,51,898	0/0:22,0:22:63.21:0,63,1191	0/0:10,0:10:12.67:0,13,215	0/0:19,0:19:57.19:0,57,1004	0/0:32,0:32:96.33:0,96,1738	0/1:19,0:19:9.87:10,0,232	0/0:28,0:28:84.29:0,84,1504	0/0:20,0:20:60.19:0,60,1063	0/0:6,0:6:18.06:0,18,363
chr10	89160206	.	TGG	T	562.08	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=11.751;DP=558;FS=3.364;HRun=2;HaplotypeScore=115.4982;InbreedingCoeff=0.5034;MQ=53.71;MQ0=21;MQRankSum=-10.720;QD=6.94;ReadPosRankSum=5.895;VQSLOD=0.5749;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,2:13:35.80:350,36,0	0/0:7,0:7:18.05:0,18,278	0/0:11,0:4:9.03:0,9,125	0/0:27,0:8:23.74:0,24,299	0/0:24,0:24:33.27:0,33,513	0/0:22,0:22:32.90:0,33,602	0/0:23,0:23:63.12:0,63,824	0/0:27,0:17:50.93:0,51,669	1/1:6,2:8:24.05:299,24,0	0/0:14,0:13:39.13:0,39,687	0/0:15,0:15:45.15:0,45,724	0/1:20,0:19:21.44:21,0,226	0/0:25,0:24:72.22:0,72,1236	0/1:20,0:20:22.32:22,0,148	0/0:18,0:18:54.17:0,54,924	0/0:15,0:15:45.15:0,45,844	0/0:39,0:37:89.87:0,90,1707	0/0:26,0:26:35.83:0,36,619	0/0:28,0:22:66.22:0,66,1150	0/0:18,0:18:54.17:0,54,924	0/0:23,0:23:66.23:0,66,1235	0/0:11,0:11:15.73:0,16,256	0/0:20,0:20:60.19:0,60,1028	0/0:34,0:34:99:0,102,1817	0/1:19,0:19:9.37:9,0,218	0/0:27,0:27:81.28:0,81,1460	0/0:17,0:17:51.17:0,51,964	0/0:6,0:6:18.06:0,18,363
chr10	89160214	.	TGG	T	517.92	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=11.989;DP=562;FS=0.537;HRun=2;HaplotypeScore=115.4820;InbreedingCoeff=0.5060;MQ=52.72;MQ0=20;MQRankSum=-11.336;QD=6.39;ReadPosRankSum=6.575;VQSLOD=0.0615;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,6:14:32.69:333,33,0	0/0:6,0:6:15.05:0,15,253	0/0:13,0:4:12.04:0,12,166	0/0:20,0:7:20.28:0,20,259	0/0:23,0:23:34.61:0,35,553	0/0:25,0:25:42.81:0,43,735	0/0:24,0:24:69.21:0,69,977	0/0:26,0:16:48.08:0,48,681	1/1:6,5:11:31.04:273,31,0	0/0:16,0:15:45.15:0,45,787	0/0:16,0:16:48.16:0,48,769	0/1:19,0:18:20.17:20,0,168	0/0:26,0:25:73.46:0,73,1237	0/1:19,0:19:21.83:22,0,108	0/0:17,0:17:51.17:0,51,899	0/0:18,0:18:54.18:0,54,975	0/0:36,0:35:96.16:0,96,1653	0/0:26,0:26:35.07:0,35,636	0/0:28,0:22:64.77:0,65,1110	0/0:16,0:16:48.16:0,48,854	0/0:25,0:25:72.25:0,72,1324	0/0:12,0:12:19.16:0,19,308	0/0:20,0:20:60.20:0,60,1047	0/0:32,0:32:93.32:0,93,1696	0/1:17,0:17:12.06:12,0,139	0/0:25,0:25:75.26:0,75,1372	0/0:20,0:20:60.18:0,60,1075	0/0:10,0:10:30.10:0,30,538
chr10	89160216	.	G	GT	333.68	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.877;DP=563;FS=2.917;HRun=2;HaplotypeScore=107.9600;InbreedingCoeff=0.9463;MQ=52.58;MQ0=20;MQRankSum=-6.891;QD=12.83;ReadPosRankSum=0.703;VQSLOD=2.6532;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,3:14:29.78:268,30,0	0/0:6,0:6:9.50:0,9,112	0/0:15,0:4:12.03:0,12,141	0/0:20,0:6:14.41:0,14,150	0/0:22,0:22:50.52:0,51,537	0/0:25,0:25:47.71:0,48,522	0/0:24,0:24:69.22:0,69,850	0/0:27,0:17:51.13:0,51,601	1/1:9,2:11:28.56:187,29,0	0/0:16,0:15:45.14:0,45,545	0/0:16,0:16:37.13:0,37,392	0/0:18,0:17:34.31:0,34,230	0/0:25,0:24:70.77:0,71,859	0/0:19,0:20:31.48:0,31,217	0/0:17,0:17:51.15:0,51,621	0/0:19,0:19:54.17:0,54,669	0/0:34,1:34:67.25:0,67,745	0/0:25,0:25:44.72:0,45,508	0/0:31,0:25:72.09:0,72,839	0/0:16,0:16:48.11:0,48,577	0/0:25,0:25:72.23:0,72,892	0/0:11,0:11:20.84:0,21,213	0/0:20,0:20:51.16:0,51,632	0/0:30,0:30:87.27:0,87,1078	0/0:16,0:16:28.71:0,29,197	0/0:27,0:27:78.23:0,78,954	0/0:19,0:19:57.18:0,57,706	0/0:11,0:11:32.84:0,33,382
chr10	89160220	.	G	GT	283.75	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.876;DP=568;FS=4.169;HRun=2;HaplotypeScore=106.1331;InbreedingCoeff=0.9472;MQ=52.94;MQ0=20;MQRankSum=-7.076;QD=11.82;ReadPosRankSum=0.399;VQSLOD=2.1861;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,1:13:29.49:206,29,0	0/0:5,0:5:9.50:0,9,112	0/0:19,0:5:12.04:0,12,148	0/0:22,0:9:20.57:0,21,242	0/0:23,0:23:56.52:0,57,598	0/0:22,0:22:44.72:0,45,508	0/0:25,0:25:63.15:0,63,744	0/0:27,0:17:48.14:0,48,577	1/1:9,2:11:31.05:199,31,0	0/0:16,0:15:36.10:0,36,426	0/0:14,0:14:37.15:0,37,406	0/0:17,0:16:34.31:0,34,221	0/0:25,0:24:71.44:0,71,862	0/0:22,0:22:37.43:0,37,247	0/0:17,0:17:48.15:0,48,595	0/0:20,0:20:54.16:0,54,656	0/0:33,1:33:62.88:0,63,705	0/0:26,0:26:44.63:0,45,473	0/0:33,0:27:78.23:0,78,939	0/0:16,0:16:48.14:0,48,583	0/0:27,0:27:75.21:0,75,914	0/0:9,0:9:14.83:0,15,151	0/0:19,0:19:54.15:0,54,654	0/0:32,0:32:90.28:0,90,1114	0/0:15,0:15:28.71:0,29,197	0/0:29,0:29:84.26:0,84,1038	0/0:19,0:19:57.18:0,57,706	0/0:11,0:11:33.10:0,33,398
chr10	89160222	.	TGG	T	524.08	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=11.906;DP=569;FS=1.174;HRun=2;HaplotypeScore=112.5658;InbreedingCoeff=0.4958;MQ=53.24;MQ0=17;MQRankSum=-11.158;QD=6.72;ReadPosRankSum=6.075;VQSLOD=0.3230;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,3:13:27.18:222,27,0	0/0:5,0:5:12.04:0,12,209	0/0:21,0:5:15.05:0,15,219	0/0:20,0:9:27.02:0,27,369	0/0:26,0:26:43.66:0,44,685	0/0:22,0:22:33.75:0,34,604	0/0:24,0:24:69.18:0,69,952	0/0:26,0:17:51.09:0,51,725	1/1:7,4:11:32.81:386,33,0	0/0:14,0:13:39.13:0,39,683	0/0:14,0:14:42.14:0,42,682	0/1:18,0:17:23.33:23,0,141	0/0:26,0:25:75.19:0,75,1276	0/1:21,0:21:15.88:16,0,167	0/0:18,0:18:54.18:0,54,943	0/0:19,0:19:57.18:0,57,1000	0/0:35,0:34:95.69:0,96,1614	0/0:25,0:25:33.76:0,34,608	0/0:31,0:27:81.27:0,81,1355	0/0:16,0:16:48.16:0,48,854	0/0:27,0:27:81.28:0,81,1456	0/0:10,0:10:10.13:0,10,177	0/0:19,0:19:57.19:0,57,1002	0/0:33,0:33:99:0,99,1777	0/1:15,0:15:18.11:18,0,78	0/0:29,0:29:87.30:0,87,1547	0/0:20,0:20:60.20:0,60,1096	0/0:11,0:11:33.11:0,33,582
chr10	89160225	.	TTGG	T	604.82	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=12.193;DP=576;FS=10.468;HRun=0;HaplotypeScore=122.6613;InbreedingCoeff=0.4617;MQ=54.23;MQ0=16;MQRankSum=-11.356;QD=7.38;ReadPosRankSum=3.870;VQSLOD=1.9497;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,6:16:32.49:225,32,0	0/0:5,0:5:12.04:0,12,224	0/0:22,0:6:15.05:0,15,181	0/0:21,0:11:33.10:0,33,409	0/0:26,0:26:19.03:0,19,497	0/0:22,0:22:18.04:0,18,417	0/0:23,0:23:62.99:0,63,669	0/0:29,0:20:59.75:0,60,686	1/1:8,5:13:37.43:308,37,0	0/0:14,0:13:36.12:0,36,664	0/0:14,0:14:42.14:0,42,660	0/1:18,0:17:76.86:82,0,77	0/0:26,0:25:75.09:0,75,1251	0/1:21,0:21:65.66:66,0,149	0/0:18,0:18:54.18:0,54,944	0/0:18,0:18:54.18:0,54,1003	0/0:34,0:33:88.12:0,88,1659	0/0:24,0:24:18.11:0,18,482	0/0:31,0:27:81.10:0,81,1281	0/0:17,0:17:48.16:0,48,860	0/0:27,0:27:78.26:0,78,1459	0/0:9,0:9:1.88:0,2,136	0/0:19,0:19:57.17:0,57,1001	0/0:34,0:34:99:0,102,1883	0/1:14,0:14:18.14:66,0,18	0/0:29,0:29:87.28:0,87,1542	0/0:21,0:21:63.21:0,63,1155	0/0:11,0:11:33.11:0,33,572
chr10	89160232	.	G	GT	445.16	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.136;DP=595;FS=34.467;HRun=2;HaplotypeScore=100.1751;InbreedingCoeff=0.9673;MQ=54.76;MQ0=13;MQRankSum=-6.126;QD=12.37;ReadPosRankSum=-1.509;VQSLOD=0.3940;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,8:19:31.71:285,32,0	0/0:5,0:5:9.50:0,9,112	0/0:25,0:9:25.63:0,26,301	0/0:21,0:11:33.10:0,33,407	0/0:25,0:25:50.52:0,51,537	0/0:17,0:17:32.63:0,33,330	0/0:21,0:21:57.10:0,57,643	0/0:31,0:23:60.17:0,60,712	1/1:9,7:16:33.98:281,34,0	0/0:15,0:14:42.13:0,42,506	0/0:15,0:15:34.12:0,34,353	0/0:17,0:16:31.30:0,31,192	0/0:24,0:23:67.06:0,67,794	0/0:23,0:23:43.51:0,44,353	0/0:18,0:18:54.15:0,54,655	0/0:19,0:19:57.18:0,57,706	0/0:37,1:37:76.57:0,77,831	0/0:23,0:23:35.67:0,36,382	0/0:28,0:26:78.25:0,78,966	0/0:17,0:17:48.13:0,48,579	0/0:30,0:30:81.16:0,81,970	0/0:9,0:9:17.84:0,18,188	0/0:22,0:22:63.16:0,63,749	0/0:34,0:34:99:0,99,1212	0/0:15,0:15:28.71:0,29,197	0/0:32,0:32:84.24:0,84,1009	0/0:22,0:22:66.21:0,66,812	0/0:13,0:13:36.10:0,36,434
chr10	89160233	.	TTGG	T	1059.48	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=11.564;DP=595;FS=20.505;HRun=0;HaplotypeScore=118.6907;InbreedingCoeff=0.4324;MQ=55.78;MQ0=12;MQRankSum=-10.448;QD=11.52;ReadPosRankSum=2.181;VQSLOD=2.1027;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,6:19:36.05:433,36,0	0/0:5,0:5:12.04:0,12,224	0/0:26,0:10:23.63:0,24,324	0/0:21,0:11:33.10:0,33,401	0/0:24,0:24:12.90:0,13,423	0/0:17,0:17:5.98:0,6,278	0/0:20,0:20:57:0,57,628	0/0:29,0:22:65.79:0,66,788	1/1:11,5:16:44.81:564,45,0	0/0:15,0:14:42.14:0,42,731	0/0:14,0:14:39.13:0,39,625	0/1:17,0:16:43.34:85,0,43	0/0:25,0:24:70.10:0,70,1231	0/1:24,0:24:56.73:57,0,251	0/0:18,0:18:54.16:0,54,931	0/0:19,0:19:57.19:0,57,1040	0/0:37,0:36:98.76:0,99,1758	0/0:23,0:23:9.12:0,9,376	0/0:31,0:29:87.28:0,87,1386	0/0:18,0:18:51.17:0,51,896	0/0:29,0:29:87.29:0,87,1569	0/0:9,0:9:1.87:0,2,136	0/0:23,0:23:66.22:0,66,1115	0/0:35,0:35:99:0,102,1870	0/1:15,0:15:52.39:63,0,52	0/0:30,0:30:84.27:0,84,1506	0/0:22,0:22:66.22:0,66,1176	0/0:13,0:13:39.13:0,39,646
chr10	89160236	.	G	GT	699.24	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.694;DP=597;FS=32.679;HRun=2;HaplotypeScore=100.7403;InbreedingCoeff=0.9696;MQ=58.69;MQ0=8;MQRankSum=-5.403;QD=18.90;ReadPosRankSum=-0.767;VQSLOD=1.7592;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,14:20:33.53:363,34,0	0/0:5,0:5:9.50:0,9,112	0/0:28,0:12:26.61:0,27,348	0/0:24,0:14:39.09:0,39,462	0/0:23,0:23:56.58:0,57,615	0/0:16,0:16:29.57:0,30,308	0/0:18,0:18:48.15:0,48,590	0/0:26,0:24:71.02:0,71,840	1/1:5,11:16:42.04:458,42,0	0/0:15,0:14:41.79:0,42,480	0/0:14,0:14:34.11:0,34,347	0/0:16,0:15:31.49:0,31,198	0/0:27,0:26:69.66:0,70,830	0/0:26,0:26:49.77:0,50,433	0/0:19,0:19:51.12:0,51,604	0/0:20,0:20:60.18:0,60,731	0/0:35,1:35:73.03:0,73,835	0/0:22,0:22:35.44:0,35,371	0/0:33,0:32:96.24:0,96,1129	0/0:18,0:18:51.16:0,51,631	0/0:30,0:30:87.27:0,87,1076	0/0:10,0:10:20.84:0,21,216	0/0:22,0:22:63.20:0,63,780	0/0:33,0:33:96.28:0,96,1173	0/0:15,0:15:28.72:0,29,200	0/0:27,0:27:81.25:0,81,1003	0/0:24,0:24:72.18:0,72,851	0/0:13,0:13:39.12:0,39,481
chr10	89163016	.	CCA	C	12260.47	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=15.504;DP=625;FS=0.000;HRun=0;HaplotypeScore=107.2358;InbreedingCoeff=0.9729;MQ=91.22;MQ0=2;MQRankSum=-3.509;QD=38.43;ReadPosRankSum=6.984;VQSLOD=6.6723;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:40:99:1547,108,0	0/0:13,0:13:39.13:0,39,713	0/0:27,0:27:78.24:0,78,1315	0/0:24,0:24:69.21:0,69,1139	1/1:1,16:17:45.15:645,45,0	1/1:0,21:21:60.20:860,60,0	1/1:0,26:26:69.23:989,69,0	1/1:1,27:28:81.23:1103,81,0	1/1:1,19:19:2.18:719,2,0	0/0:18,0:18:51.17:0,51,928	0/0:14,0:14:39.13:0,39,712	1/1:1,17:18:51.17:730,51,0	0/0:28,0:28:81.28:0,81,1485	1/1:3,21:24:66.22:945,66,0	0/0:33,0:33:93.30:0,93,1661	0/0:18,0:18:51.17:0,51,923	0/0:26,0:26:78.27:0,78,1430	1/1:0,14:14:39.13:559,39,0	1/1:1,22:22:60.20:860,60,0	1/1:2,28:30:72.16:985,72,0	0/0:29,0:29:87.30:0,87,1586	1/1:1,19:20:54.10:773,54,0	0/0:21,0:21:51.16:0,51,933	0/0:19,0:19:57.20:0,57,1033	1/1:0,19:19:57.19:817,57,0	0/0:26,0:26:78.26:0,78,1407	1/1:0,19:19:51.17:730,51,0	0/0:10,0:10:27.09:0,27,495
chr10	89164558	.	CCTCTCT	C	151.06	PASS	AC=8;AF=0.167;AN=48;BaseQRankSum=2.795;DP=508;FS=3.898;HRun=0;HaplotypeScore=102.1965;InbreedingCoeff=0.3981;MQ=74.32;MQ0=8;MQRankSum=-2.816;QD=2.44;ReadPosRankSum=0.083;VQSLOD=1.6570;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:8.93:0,9,124	0/0:8,0:8:0.47:0,0,1	./.	./.	1/1:21,0:21:4.82:32,5,0	1/1:14,4:18:3.01:37,3,0	0/0:9,0:9:3:0,3,26	0/0:26,0:25:2.66:0,3,6	0/0:7,0:10:8.16:0,8,134	0/0:14,0:14:3.01:0,3,93	0/0:20,0:19:3.01:0,3,92	1/1:7,0:7:2.54:36,3,0	0/0:7,0:9:3.01:0,3,37	1/1:13,2:15:8.92:162,9,0	0/0:18,0:19:21.07:0,21,567	0/0:12,0:13:3.01:0,3,38	0/0:22,0:22:21.04:0,21,485	./.	0/0:18,0:16:8.06:0,8,84	0/0:23,0:23:5.92:0,6,183	0/0:17,0:17:3.01:0,3,43	0/0:15,2:17:3:0,3,25	0/0:26,0:26:9.03:0,9,168	0/0:18,0:20:20.19:0,20,507	./.	0/0:22,0:22:4.35:0,4,28	0/0:16,0:15:6.02:0,6,160	0/0:21,0:21:3.90:0,4,93
chr10	89164703	.	TAA	T	6316	PASS	AB=0.900;AC=25;AF=0.446;AN=56;BaseQRankSum=5.080;DP=507;FS=8.295;HRun=11;HaplotypeScore=110.9121;InbreedingCoeff=0.9224;MQ=71.15;MQ0=0;MQRankSum=-2.889;QD=25.57;ReadPosRankSum=0.830;VQSLOD=4.0475;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:14:25.07:0,25,101	0/0:5,0:17:36.06:0,36,358	0/1:8,1:8:40.47:40,0,109	0/0:13,0:13:26.29:0,26,270	1/1:4,21:25:54.09:573,54,0	1/1:4,17:21:51.09:543,51,0	1/1:1,14:15:42.10:447,42,0	1/1:2,11:13:33.06:343,33,0	0/0:1,0:13:23.30:0,23,83	0/0:7,0:31:78.13:0,78,786	0/0:2,0:21:56.99:0,57,536	1/1:2,11:13:30.02:307,30,0	0/0:14,0:15:45.15:0,45,675	1/1:2,14:17:41.83:426,42,0	0/0:13,0:13:39.12:0,39,580	0/0:19,0:20:53.66:0,54,774	0/0:2,0:22:60.11:0,60,607	1/1:0,4:4:12.03:126,12,0	1/1:6,21:28:67.96:702,68,0	1/1:0,27:27:81.20:860,81,0	0/0:9,0:9:27.09:0,27,412	1/1:3,28:31:78.16:830,78,0	0/0:18,0:18:48.16:0,48,739	0/0:11,0:12:38.60:0,39,525	1/1:5,17:22:51.12:543,51,0	0/0:25,0:26:72.24:0,72,1091	1/1:1,21:22:54.13:575,54,0	0/0:12,0:14:38.10:0,38,525
chr10	89165060	.	TA	T	660.68	PASS	AB=0.917;AC=5;AF=0.089;AN=56;BaseQRankSum=6.869;DP=506;FS=0.616;HRun=10;HaplotypeScore=53.0341;InbreedingCoeff=0.8009;MQ=76.27;MQ0=0;MQRankSum=-0.612;QD=14.06;ReadPosRankSum=1.945;VQSLOD=3.5577;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:47.99:417,48,0	0/0:7,0:7:12.03:0,12,133	0/0:17,0:17:38.98:0,39,393	0/0:16,0:15:14.82:0,15,225	0/0:22,0:22:54.14:0,54,590	0/0:28,1:29:52.16:0,52,804	0/0:10,0:10:21.06:0,21,232	0/0:23,2:25:8.24:0,8,546	1/1:2,15:17:41.99:365,42,0	0/0:23,0:23:66.17:0,66,724	0/0:35,0:37:93.08:0,93,1001	0/0:16,0:16:36.10:0,36,398	0/0:15,0:15:42.08:0,42,452	0/0:7,0:7:12.03:0,12,133	0/0:15,0:16:35.92:0,36,372	0/0:9,0:9:23.96:0,24,248	0/0:30,1:31:58.19:0,58,870	0/0:16,1:17:25.17:0,25,495	0/0:18,1:21:27.80:0,28,493	0/0:26,0:26:75.04:0,75,811	0/0:15,1:16:13.04:0,13,363	0/0:14,0:14:39.98:0,40,426	0/0:14,0:15:44.94:0,45,470	0/1:10,1:11:0.60:1,0,208	0/0:18,0:17:31.25:0,31,398	0/0:21,0:21:60.14:0,60,649	0/0:20,0:20:42.57:0,43,458	0/0:11,0:11:21.04:0,21,223
chr10	89166490	.	AAC	A	8512.96	PASS	AB=0.846;AC=37;AF=0.661;AN=56;BaseQRankSum=11.084;DP=940;FS=3.444;HRun=0;HaplotypeScore=195.5173;InbreedingCoeff=0.7107;MQ=55.70;MQ0=18;MQRankSum=6.405;QD=13.64;ReadPosRankSum=1.428;VQSLOD=4.7510;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,16:35:16.18:554,16,0	1/1:8,5:12:23.55:223,24,0	0/0:52,1:22:34.25:0,34,483	0/0:37,0:16:26.01:0,26,197	1/1:15,13:30:53.96:551,54,0	1/1:14,16:29:39.34:633,39,0	1/1:7,18:25:18.15:435,18,0	1/1:29,16:45:4.01:545,4,0	1/1:16,24:42:44.85:784,45,0	1/1:20,11:29:50.01:530,50,0	1/1:11,11:24:50.61:525,51,0	1/1:18,17:34:54.06:626,54,0	0/0:30,2:32:13.64:0,14,1117	1/1:11,17:27:53.95:613,54,0	0/1:41,3:43:0.69:1,0,1462	0/0:31,1:32:36.72:0,37,987	1/1:10,16:27:52.20:621,52,0	1/1:16,10:28:0.83:411,1,0	0/1:13,0:17:63.66:64,0,87	1/1:21,0:28:11.29:56,11,0	0/0:56,1:57:91.08:0,91,1839	1/1:19,13:31:17.68:582,18,0	0/0:20,1:21:15.91:0,16,694	0/0:46,0:46:99:0,114,1665	1/1:13,13:24:9.49:545,9,0	0/0:36,1:36:9.77:0,10,945	1/1:14,0:24:10.85:128,11,0	0/1:26,5:31:87.25:87,0,1017
chr10	89166561	.	GGA	G	3068.70	PASS	AB=0.965;AC=21;AF=0.375;AN=56;BaseQRankSum=12.608;DP=1130;FS=3.602;HRun=0;HaplotypeScore=306.7873;InbreedingCoeff=-0.1837;MQ=56.25;MQ0=8;MQRankSum=0.487;QD=3.95;ReadPosRankSum=9.400;VQSLOD=0.5493;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:56,6:56:71.16:226,0,71	1/1:19,0:15:34.23:146,34,0	0/0:57,0:37:61.65:0,62,1081	0/0:39,0:25:55.92:0,56,603	0/1:39,2:36:48.38:201,0,48	0/1:37,1:38:42.87:171,0,43	0/1:28,0:27:52.12:82,0,52	0/1:62,0:56:99:141,0,398	0/1:58,16:64:99:213,0,206	0/1:44,0:40:99:184,0,101	0/1:35,0:32:19.99:222,0,20	0/1:36,1:34:75.31:107,0,75	0/0:25,0:25:37.73:0,38,1071	0/1:43,0:40:41.31:207,0,41	0/0:39,0:39:99:0,117,1981	0/0:38,0:37:96.48:0,96,1789	0/1:38,2:39:95:147,0,95	0/1:46,0:45:20.72:257,0,21	0/1:26,2:23:62.97:63,0,224	1/1:43,5:37:35.84:244,36,0	0/0:45,0:45:99:0,129,2166	0/1:37,1:32:21.06:140,0,21	0/0:22,0:22:53.43:0,53,1103	0/0:41,0:41:99:0,100,1938	0/1:36,1:31:60.64:133,0,61	0/0:31,0:31:75.13:0,75,1481	1/1:45,11:48:1.12:357,1,0	0/0:16,0:16:47.89:0,48,778
chr10	89166562	.	GAC	G	13683.06	PASS	AB=0.810;AC=35;AF=0.625;AN=56;BaseQRankSum=10.858;DP=1139;FS=5.445;HRun=0;HaplotypeScore=275.2413;InbreedingCoeff=0.7631;MQ=56.02;MQ0=9;MQRankSum=2.922;QD=16.98;ReadPosRankSum=3.740;VQSLOD=4.4512;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,25:56:79.12:929,79,0	1/1:7,12:15:42.05:482,42,0	0/0:59,0:37:54.21:0,54,801	0/0:38,0:24:32.12:0,32,400	1/1:17,26:36:72.16:874,72,0	1/1:17,20:38:62.99:729,63,0	1/1:16,11:27:30.66:429,31,0	0/1:46,18:58:99:783,0,113	1/1:51,23:64:73.87:947,74,0	1/1:16,28:40:32.90:895,33,0	1/1:11,24:32:69.21:837,69,0	1/1:19,15:33:40.68:517,41,0	0/1:21,3:25:49.02:49,0,740	1/1:19,22:41:81.20:907,81,0	0/0:39,0:39:90.29:0,90,1429	0/0:37,1:37:44.87:0,45,1218	1/1:19,19:39:57.06:703,57,0	1/1:10,34:46:42.19:1061,42,0	0/1:19,9:23:14.80:226,0,15	1/1:19,27:36:79.51:908,80,0	0/0:46,0:46:99:0,99,1502	1/1:15,23:32:57.08:673,57,0	0/0:22,1:23:23.76:0,24,822	0/0:40,1:41:59.92:0,60,1445	1/1:15,19:31:48.25:703,48,0	0/0:30,2:32:8.43:0,8,1061	1/1:24,29:48:98.79:1031,99,0	0/0:17,0:17:35.95:0,36,540
chr10	89167114	.	C	CTGTG	5169.92	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=-3.062;DP=614;FS=2.440;HRun=0;HaplotypeScore=139.4882;InbreedingCoeff=0.8267;MQ=68.55;MQ0=11;MQRankSum=-3.075;QD=17.77;ReadPosRankSum=0.392;VQSLOD=4.7076;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:43.42:0,43,384	1/1:11,0:11:27.08:396,27,0	0/0:36,0:22:32.52:0,33,672	0/0:45,0:20:46.25:0,46,729	1/1:18,4:21:30.03:460,30,0	1/1:17,2:19:27.09:473,27,0	1/1:22,1:21:24.04:399,24,0	1/1:30,0:27:48.08:804,48,0	1/1:31,0:31:44.59:431,45,0	1/1:22,0:18:39.12:662,39,0	1/1:16,0:16:24:339,24,0	1/1:9,0:8:15.05:276,15,0	0/0:24,0:22:57.13:0,57,810	1/1:1,16:17:3.01:69,3,0	0/0:22,0:21:60.18:0,60,931	0/0:32,0:32:81.17:0,81,1350	1/1:10,2:11:12.03:218,12,0	1/1:9,0:8:6.02:95,6,0	0/0:15,0:15:5.45:0,5,100	0/0:25,0:25:25.12:0,25,242	0/0:26,0:26:11.85:0,12,560	1/1:14,2:14:15.05:240,15,0	0/0:13,0:13:33.10:0,33,523	0/0:29,0:28:63.21:0,63,1014	1/1:12,1:13:21.79:298,22,0	0/1:20,0:20:6.88:7,0,633	0/1:20,0:19:2.34:2,0,189	0/0:13,0:13:27.09:0,27,410
chr10	89167123	.	T	TGTGTGAGAGAGAGA	5834.21	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-6.282;DP=635;FS=0.848;HRun=0;HaplotypeScore=226.3430;InbreedingCoeff=0.6950;MQ=61.18;MQ0=33;MQRankSum=-3.128;QD=20.05;ReadPosRankSum=-3.042;VQSLOD=3.2881;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:42:37.37:0,37,1394	1/1:12,0:11:27.08:397,27,0	0/1:32,0:18:12.93:13,0,639	0/0:43,0:18:46.25:0,46,729	1/1:22,0:21:30.97:519,31,0	1/1:22,0:18:30.57:541,31,0	1/1:23,0:20:23.23:397,23,0	0/1:28,0:23:41.10:737,0,41	0/1:30,0:30:99:280,0,641	1/1:23,0:18:40.94:667,41,0	1/1:14,0:14:26.74:350,27,0	1/1:12,0:10:15.52:325,16,0	0/0:24,0:23:63.19:0,63,1548	1/1:21,0:20:6.02:258,6,0	0/0:29,0:23:66.20:0,66,1729	0/0:31,0:31:83.86:0,84,2446	1/1:11,0:8:18.05:561,18,0	1/1:2,5:8:6.02:225,6,0	0/0:14,0:14:20.17:0,20,636	0/0:26,0:25:25.10:0,25,830	0/0:32,0:30:48.37:0,48,1379	1/1:16,0:12:15.05:240,15,0	0/0:17,0:15:36.11:0,36,989	0/0:32,0:29:69.24:0,69,2191	1/1:15,0:14:23.90:323,24,0	0/0:20,0:18:2.23:0,2,1414	0/0:18,0:18:1.05:0,1,831	0/0:13,0:13:30.08:0,30,764
chr10	89167151	.	AGAGAGTGT	A	2071.29	PASS	AB=0.998;AC=24;AF=0.444;AN=54;BaseQRankSum=1.921;DP=620;FS=6.637;HRun=0;HaplotypeScore=173.6746;InbreedingCoeff=-0.2571;MQ=41.78;MQ0=62;MQRankSum=1.695;QD=4.26;ReadPosRankSum=-1.294;VQSLOD=2.0216;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:38:36.94:418,37,0	0/1:11,0:10:22.47:67,0,22	0/0:4,0:1:3.01:0,3,59	./.	0/1:23,0:21:26.67:27,0,153	0/1:26,0:21:31.53:32,0,163	0/1:29,0:23:46.15:119,0,46	0/0:30,0:20:18.85:0,19,213	0/1:27,1:28:30.17:144,0,30	0/1:26,0:21:99:158,0,139	0/1:21,0:20:27.16:59,0,27	0/0:18,0:15:15.46:0,15,221	0/1:25,0:23:22.21:22,0,697	0/0:15,0:12:5.98:0,6,57	0/1:27,0:19:99:153,0,194	0/0:22,0:22:26.19:0,26,810	0/1:14,0:8:57.54:58,0,82	0/1:12,0:8:31.92:32,0,101	1/1:21,0:15:10.09:155,10,0	1/1:19,2:20:24.08:194,24,0	0/1:40,0:36:29.25:29,0,708	0/1:18,0:14:4.43:4,0,31	0/0:19,0:16:18.95:0,19,381	0/1:37,0:32:42.56:43,0,817	0/1:25,0:21:49.13:49,0,167	0/1:22,0:19:99:147,0,403	1/1:16,2:16:4.09:329,4,0	0/0:16,0:14:10.19:0,10,324
chr10	89167153	.	AGAGTGT	A	2984.17	PASS	AB=1.000;AC=31;AF=0.574;AN=54;BaseQRankSum=1.557;DP=637;FS=2.098;HRun=0;HaplotypeScore=159.0095;InbreedingCoeff=-0.2011;MQ=41.14;MQ0=66;MQRankSum=2.927;QD=5.28;ReadPosRankSum=-0.408;VQSLOD=2.7010;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:44,0:39:64.81:592,65,0	1/1:13,0:10:7:80,7,0	0/0:4,0:1:3.01:0,3,31	./.	0/1:26,0:21:26.72:27,0,112	0/1:26,0:21:34.09:34,0,97	0/1:28,0:22:22.51:122,0,23	0/0:31,0:20:9.79:0,10,75	1/1:25,0:26:36.63:320,37,0	0/1:33,0:22:29.84:207,0,30	1/1:26,0:21:11.93:135,12,0	0/0:18,0:15:12.26:0,12,126	0/1:25,0:23:55.96:56,0,470	0/0:13,0:10:4.19:0,4,23	0/1:27,0:19:99:212,0,121	0/1:22,0:22:16.85:17,0,468	0/1:15,0:9:25.38:91,0,25	0/1:13,0:9:31.95:32,0,55	1/1:14,7:15:20.78:202,21,0	1/1:18,2:18:36.02:307,36,0	0/1:41,0:36:26.06:26,0,492	1/1:18,0:14:2.64:13,3,0	0/1:19,0:16:1.90:2,0,202	0/1:38,0:33:74.17:74,0,531	0/1:27,0:22:46.30:46,0,136	0/1:23,0:19:99:137,0,330	1/1:18,0:16:35.67:353,36,0	0/1:16,0:14:65.11:65,0,253
chr10	89167155	.	AGTGTGT	A	1334.78	PASS	AB=0.986;AC=22;AF=0.423;AN=52;BaseQRankSum=-0.189;DP=691;FS=3.232;HRun=0;HaplotypeScore=178.8466;InbreedingCoeff=0.2471;MQ=39.72;MQ0=66;MQRankSum=-0.572;QD=3.17;ReadPosRankSum=-1.997;VQSLOD=2.5089;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:45,0:39:3.54:141,0,4	0/1:18,0:14:36.17:120,0,36	./.	./.	0/1:30,0:21:2.03:2,0,190	0/0:27,0:22:0.12:0,0,123	0/1:27,0:22:47.50:56,0,47	1/1:30,0:20:4.53:25,5,0	1/1:28,0:26:3.64:27,4,0	0/1:40,1:27:49.54:427,0,50	1/1:30,2:21:11.71:245,12,0	0/0:17,0:15:11.79:0,12,150	0/0:25,0:23:14.23:0,14,574	0/0:13,0:10:2.72:0,3,22	0/1:27,0:19:18.38:18,0,262	0/0:23,0:22:24.52:0,25,389	1/1:14,0:9:12:198,12,0	0/1:13,0:9:10.88:11,0,47	1/1:20,0:14:6.01:71,6,0	1/1:34,0:21:6.79:53,7,0	0/0:42,0:37:20.31:0,20,603	0/0:22,0:15:14.43:0,14,105	0/0:19,0:16:6.02:0,6,157	0/1:38,0:33:8.13:8,0,570	0/0:33,0:25:11.49:0,11,286	0/0:25,0:19:22.32:0,22,531	1/1:18,1:16:8.81:100,9,0	0/0:16,0:14:18.06:0,18,417
chr10	89167909	.	G	GATGGACC	22912.69	PASS	AB=0.692;AC=33;AF=0.611;AN=54;BaseQRankSum=-7.753;DP=594;FS=8.014;HRun=0;HaplotypeScore=108.5250;InbreedingCoeff=0.5745;MQ=49.27;MQ0=16;MQRankSum=-14.297;QD=57.00;ReadPosRankSum=-1.145;VQSLOD=4.2969;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,27:38:69.71:2558,70,0	1/1:2,5:7:18.06:698,18,0	./.	0/0:21,0:5:9.03:0,9,145	1/1:2,5:8:9.03:339,9,0	0/1:9,15:23:95.49:1757,0,95	1/1:9,21:30:75.26:2657,75,0	1/1:25,10:29:63.19:1881,63,0	0/1:5,14:18:23.66:1698,0,24	0/1:6,11:18:23.69:1540,0,24	1/1:0,7:9:9.03:291,9,0	1/1:5,16:16:27.09:1048,27,0	0/0:24,0:23:66.23:0,66,1593	1/1:5,14:15:35.99:1353,36,0	0/0:16,0:15:33.06:0,33,756	0/0:17,0:17:42.11:0,42,968	1/1:8,14:25:33.11:1232,33,0	1/1:8,10:17:33.11:1240,33,0	0/1:20,13:29:99:1728,0,263	1/1:2,7:10:21.07:776,21,0	0/0:34,0:34:93.32:0,93,2181	1/1:2,7:11:15.05:582,15,0	0/0:18,0:18:54.19:0,54,1348	0/0:38,0:38:99:0,99,2385	1/1:7,5:11:15.05:481,15,0	0/1:31,1:31:41.49:41,0,1600	1/1:6,15:17:27.09:1014,27,0	0/0:7,0:6:12.04:0,12,236
chr10	89169386	.	CTCTGCCT	C	11387.44	PASS	AB=0.951;AC=20;AF=0.357;AN=56;BaseQRankSum=2.387;DP=1359;FS=1.517;HRun=0;HaplotypeScore=460.8530;InbreedingCoeff=-0.5484;MQ=58.36;MQ0=11;MQRankSum=-3.832;QD=9.83;ReadPosRankSum=1.387;VQSLOD=1.7809;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:123,14:134:99:2210,0,531	0/1:15,0:15:24.30:24,0,118	0/0:29,0:21:35.50:0,36,336	0/0:35,0:29:41.38:0,41,501	0/1:37,0:36:37.38:37,0,380	0/1:46,3:48:99:763,0,222	0/1:89,1:91:99:830,0,754	0/1:73,0:68:99:382,0,696	0/1:84,4:88:99:1046,0,769	0/1:71,2:71:99:357,0,1082	0/1:29,1:28:99:169,0,148	0/1:70,8:78:99:1105,0,777	0/0:14,0:14:33.03:0,33,611	0/1:57,3:59:99:687,0,702	0/0:17,0:17:45.05:0,45,689	0/1:23,0:23:4.20:4,0,1297	0/1:69,1:69:99:616,0,573	0/1:52,0:52:99:450,0,400	0/1:53,47:91:99:1065,0,640	0/1:43,1:44:99:391,0,422	0/0:45,0:44:80.38:0,80,1834	0/1:34,1:34:93.05:93,0,318	0/0:3,0:3:8.98:0,9,107	0/0:42,0:42:99:0,114,2240	0/1:29,0:28:88.83:89,0,263	0/1:16,1:17:31.49:31,0,506	0/1:49,9:57:99:1037,0,389	0/0:14,0:14:39.02:0,39,644
chr10	89169517	.	CCCTCTGT	C	10081.52	PASS	AB=0.888;AC=19;AF=0.339;AN=56;BaseQRankSum=-4.021;DP=1207;FS=12.692;HRun=0;HaplotypeScore=360.0050;InbreedingCoeff=-0.5042;MQ=51.89;MQ0=9;MQRankSum=-9.208;QD=10.15;ReadPosRankSum=-11.738;VQSLOD=0.4279;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:111,11:120:99:1001,0,954	0/1:16,2:18:33.49:381,0,33	0/0:28,0:16:8.35:0,8,141	0/1:19,0:10:2.03:2,0,146	0/1:29,6:34:91.19:336,0,91	0/1:39,8:47:99:619,0,286	0/1:63,7:70:99:516,0,661	0/1:63,0:60:26.28:729,0,26	0/1:58,7:65:99:744,0,316	0/1:42,2:43:99:542,0,536	0/1:20,4:23:94.59:311,0,95	0/1:53,7:60:99:849,0,559	0/0:22,0:22:48.97:0,49,1226	0/1:50,3:52:99:653,0,489	0/0:16,0:15:36.07:0,36,845	0/0:13,0:13:33.05:0,33,555	0/1:54,67:120:99:305,0,996	0/1:35,41:76:99:508,0,1167	0/1:52,4:41:99:494,0,166	0/1:26,0:24:99:352,0,236	0/0:62,0:61:99:0,141,3631	0/1:31,1:31:99:654,0,443	0/0:8,0:8:23.71:0,24,615	0/0:35,0:34:70.98:0,71,2098	0/1:17,3:18:57.46:299,0,57	0/0:23,0:23:18.18:0,18,1076	0/1:32,10:40:99:788,0,347	0/0:7,0:7:18.01:0,18,320
chr10	89169696	.	ACTACTCAAGG	A	24625.55	PASS	AB=0.694;AC=19;AF=0.339;AN=56;BaseQRankSum=21.899;DP=965;FS=12.163;HRun=0;HaplotypeScore=327.1735;InbreedingCoeff=-0.5143;MQ=65.61;MQ0=0;MQRankSum=-20.535;QD=29.99;ReadPosRankSum=1.040;VQSLOD=3.1237;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:69,50:116:99:3694,0,4915	0/1:6,9:15:99:537,0,564	0/0:20,0:20:42.11:0,42,1590	0/0:12,0:12:23.84:0,24,832	0/1:30,21:51:99:1452,0,2016	0/1:25,16:41:99:1066,0,2542	0/1:29,14:43:99:654,0,2328	0/1:26,26:50:99:1115,0,1999	0/1:21,21:42:99:1367,0,2526	0/1:45,12:57:99:989,0,3504	0/1:13,28:41:99:1943,0,1137	0/1:12,14:26:99:1143,0,1154	0/0:14,0:14:39.12:0,39,1741	0/1:17,22:39:99:1608,0,1267	0/0:10,0:10:27.09:0,27,1391	0/0:16,0:16:45.14:0,45,2082	0/1:34,22:56:99:1394,0,3043	0/1:17,14:31:99:598,0,1764	0/1:15,21:36:99:1253,0,693	0/1:19,27:46:99:2365,0,959	0/0:28,0:28:81.28:0,81,3860	0/1:8,7:15:99:527,0,435	0/0:6,0:6:18.06:0,18,915	0/0:22,0:22:63.20:0,63,3056	0/1:22,15:37:99:1069,0,2345	0/1:24,1:25:25.25:25,0,3011	0/1:17,32:49:99:1827,0,1391	0/0:16,0:16:36.12:0,36,1752
chr10	89170029	.	AGC	A	12324.98	PASS	AB=0.780;AC=18;AF=0.321;AN=56;BaseQRankSum=24.906;DP=1438;FS=0.706;HRun=0;HaplotypeScore=278.1320;InbreedingCoeff=-0.4737;MQ=59.67;MQ0=0;MQRankSum=-14.445;QD=10.07;ReadPosRankSum=1.849;VQSLOD=4.3002;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:74,46:120:99:1534,0,3956	0/1:21,8:29:99:304,0,1143	0/0:17,0:17:45.61:0,46,869	0/0:16,0:16:45.13:0,45,833	0/1:50,13:63:99:343,0,2494	0/1:44,16:60:99:518,0,2255	0/1:41,13:54:99:375,0,2186	0/1:72,26:96:99:767,0,3778	0/1:47,33:80:99:1231,0,2487	0/1:47,23:69:99:871,0,2413	0/1:50,16:66:99:562,0,2607	0/1:57,17:74:99:521,0,2900	0/0:22,0:22:66.23:0,66,1340	0/1:33,13:46:99:506,0,1650	0/0:23,0:23:66.23:0,66,1339	0/0:29,0:29:81.26:0,81,1608	0/1:49,13:62:99:376,0,2655	0/1:30,17:47:99:598,0,1652	0/1:51,42:93:99:1686,0,2564	0/1:37,28:65:99:956,0,1909	0/0:25,0:25:75.26:0,75,1524	0/1:48,9:57:99:183,0,2405	0/0:14,0:14:42.14:0,42,851	0/0:14,0:14:42.13:0,42,816	0/1:49,8:56:99:137,0,2584	0/0:34,0:34:99:0,102,2018	0/1:59,24:83:99:859,0,3011	0/0:20,0:20:60.21:0,60,1219
chr10	89170910	.	GC	G	5986.45	PASS	AB=0.828;AC=18;AF=0.321;AN=56;BaseQRankSum=3.743;DP=1581;FS=16.768;HRun=4;HaplotypeScore=447.7016;InbreedingCoeff=-0.4733;MQ=62.40;MQ0=0;MQRankSum=-9.713;QD=4.60;ReadPosRankSum=4.846;VQSLOD=0.4328;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:98,26:120:99:619,0,2992	0/1:23,12:34:99:311,0,629	0/0:20,0:20:45.37:0,45,706	0/0:25,0:25:63.20:0,63,842	0/1:59,10:67:99:110,0,1534	0/1:36,12:45:99:281,0,996	0/1:57,28:82:99:736,0,1843	0/1:85,31:114:99:733,0,2603	0/1:66,11:74:99:137,0,1981	0/1:64,8:70:99:113,0,1918	0/1:37,11:48:99:206,0,1113	0/1:64,14:75:99:278,0,1900	0/0:32,0:32:96.30:0,96,1311	0/1:60,15:70:99:257,0,1736	0/0:40,0:39:99:0,117,1605	0/0:28,0:28:84.27:0,84,1157	0/1:47,32:79:99:892,0,1558	0/1:50,5:55:20.33:20,0,1852	0/1:58,8:61:99:101,0,1627	0/1:57,10:67:99:182,0,1834	0/0:51,0:51:99:0,150,2065	0/1:54,13:66:99:305,0,1510	0/0:21,0:21:54.18:0,54,755	0/0:25,0:25:72.24:0,72,1008	0/1:45,15:59:99:347,0,1376	0/0:27,0:27:81.25:0,81,1115	0/1:62,17:77:99:359,0,2132	0/0:12,0:12:36.12:0,36,501
chr10	89170989	.	T	TG	24812.32	PASS	AB=0.645;AC=18;AF=0.321;AN=56;BaseQRankSum=25.928;DP=1589;FS=99.246;HRun=3;HaplotypeScore=348.4775;InbreedingCoeff=-0.4753;MQ=62.17;MQ0=0;MQRankSum=-25.640;QD=19.03;ReadPosRankSum=-4.427;VQSLOD=0.2976;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:75,62:137:99:2295,0,2006	0/1:15,21:35:99:971,0,317	0/0:28,0:28:77.93:0,78,1054	0/0:18,0:19:19.38:0,19,509	0/1:21,44:64:99:840,0,503	0/1:20,19:37:99:482,0,642	0/1:37,52:89:99:2118,0,1018	0/1:41,43:84:99:1680,0,893	0/1:33,25:57:99:755,0,1030	0/1:33,50:79:99:1774,0,962	0/1:23,25:46:99:840,0,429	0/1:27,39:66:99:1330,0,850	0/0:35,0:35:99:0,102,1398	0/1:36,31:65:99:912,0,1082	0/0:35,0:35:99:0,99,1363	0/0:24,0:24:72.24:0,72,1007	0/1:52,43:95:99:1562,0,1326	0/1:32,30:62:99:986,0,996	0/1:31,38:69:99:1565,0,758	0/1:19,64:80:99:2540,0,250	0/0:44,0:44:99:0,132,1835	0/1:38,44:74:99:1016,0,970	0/0:20,0:20:60.20:0,60,834	0/0:43,0:43:99:0,126,1756	0/1:26,49:74:99:1711,0,842	0/0:31,1:32:45.81:0,46,1195	0/1:22,44:65:99:1434,0,557	0/0:5,0:5:15.05:0,15,210
chr10	89171001	.	GA	G	17063.41	PASS	AB=0.639;AC=18;AF=0.321;AN=56;BaseQRankSum=28.990;DP=1615;FS=96.724;HRun=5;HaplotypeScore=368.7298;InbreedingCoeff=-0.4749;MQ=65.09;MQ0=0;MQRankSum=-25.955;QD=12.88;ReadPosRankSum=-6.923;VQSLOD=0.1236;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:73,68:141:99:1429,0,2080	0/1:12,22:33:99:592,0,281	0/0:33,0:33:96.78:0,97,1269	0/0:24,0:25:54.12:0,54,711	0/1:25,44:68:99:997,0,573	0/1:19,26:44:99:409,0,525	0/1:40,49:89:99:1308,0,904	0/1:40,45:85:99:1148,0,985	0/1:30,32:61:99:541,0,929	0/1:34,47:78:99:1095,0,855	0/1:19,29:46:99:763,0,340	0/1:29,33:62:99:603,0,761	0/0:35,0:35:99:0,99,1344	0/1:31,40:70:99:867,0,1069	0/0:35,0:35:99:0,102,1387	0/0:26,0:26:69.23:0,69,941	0/1:50,43:93:99:933,0,1399	0/1:32,32:64:99:712,0,908	0/1:36,35:70:99:835,0,684	0/1:17,68:83:99:1822,0,238	0/0:41,0:41:99:0,123,1612	0/1:34,54:80:99:1120,0,943	0/0:18,0:18:51.17:0,51,695	0/0:39,0:39:99:0,117,1525	0/1:31,43:74:99:1189,0,882	0/0:29,2:31:16.23:0,16,999	0/1:27,36:62:99:700,0,715	0/0:7,0:7:21.07:0,21,287
chr10	89172161	.	GA	G	44392.67	PASS	AB=0.907;AC=37;AF=0.661;AN=56;BaseQRankSum=13.851;DP=1940;FS=7.246;HRun=7;HaplotypeScore=307.9385;InbreedingCoeff=0.9347;MQ=58.30;MQ0=0;MQRankSum=-5.785;QD=25.24;ReadPosRankSum=2.028;VQSLOD=-0.1772;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,159:168:99:4268,419,0	1/1:5,30:35:84.18:857,84,0	0/0:25,0:23:60.16:0,60,715	0/0:21,0:21:49.33:0,49,651	1/1:8,86:94:99:2416,238,0	1/1:5,66:71:99:1897,186,0	1/1:7,54:61:99:1438,141,0	1/1:15,99:114:99:2793,279,0	1/1:8,102:110:99:2791,276,0	1/1:14,109:123:99:3312,328,0	1/1:10,70:80:99:1987,195,0	1/1:2,55:57:99:1528,150,0	0/0:21,0:21:60.18:0,60,743	1/1:7,64:71:99:1774,174,0	0/0:29,0:29:84.27:0,84,1056	0/0:18,0:18:48.15:0,48,604	1/1:6,75:81:99:2006,198,0	1/1:3,65:68:99:1530,150,0	1/1:12,106:117:99:3143,313,0	1/1:4,127:132:99:3715,369,0	0/0:18,0:18:51.16:0,51,642	1/1:9,78:87:99:2141,210,0	0/0:24,0:24:72.23:0,72,903	0/0:9,0:9:27:0,27,318	1/1:3,111:114:99:3181,313,0	0/1:35,4:39:6.63:7,0,1092	1/1:10,126:136:99:3609,355,0	0/0:16,0:16:42.13:0,42,528
chr10	89172232	.	AGT	A	9099.90	PASS	AB=0.903;AC=18;AF=0.321;AN=56;BaseQRankSum=4.832;DP=1814;FS=5.168;HRun=0;HaplotypeScore=610.8230;InbreedingCoeff=-0.4774;MQ=52.55;MQ0=5;MQRankSum=-2.928;QD=5.83;ReadPosRankSum=2.910;VQSLOD=0.7564;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:134,18:166:99:838,0,325	0/1:21,11:35:38.08:428,0,38	0/0:29,0:19:33.52:0,34,482	0/0:26,0:13:18:0,18,238	0/1:60,7:76:99:410,0,166	0/1:49,12:68:99:447,0,275	0/1:57,6:67:99:332,0,290	0/1:109,6:123:99:471,0,526	0/1:87,12:105:99:689,0,230	0/1:84,9:101:99:622,0,589	0/1:52,5:62:99:301,0,310	0/1:43,11:60:99:602,0,174	0/0:23,0:23:63.13:0,63,940	0/1:51,2:55:99:296,0,242	0/0:22,1:23:10.95:0,11,684	0/0:17,0:17:44.87:0,45,663	0/1:67,6:86:99:474,0,337	0/1:60,9:75:99:506,0,270	0/1:93,3:96:99:359,0,269	0/1:87,11:106:99:777,0,106	0/0:42,0:42:93.11:0,93,1416	0/1:61,5:72:99:306,0,496	0/0:17,0:18:35.61:0,36,555	0/0:31,0:31:75.53:0,76,1160	0/1:75,7:92:99:346,0,287	0/0:33,1:34:33.90:0,34,1158	0/1:77,19:103:99:897,0,133	0/0:10,0:10:24.08:0,24,390
chr10	89172245	.	GTGTA	G	15554.89	PASS	AB=0.976;AC=22;AF=0.393;AN=56;BaseQRankSum=8.348;DP=1799;FS=24.377;HRun=0;HaplotypeScore=655.1729;InbreedingCoeff=-0.1897;MQ=48.06;MQ0=9;MQRankSum=-2.127;QD=10.00;ReadPosRankSum=-3.673;VQSLOD=-0.3577;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:173,0:174:95.03:1512,0,95	0/1:36,1:36:43.29:755,0,43	0/0:35,0:15:32.54:0,33,334	0/0:26,0:9:21.03:0,21,304	1/1:66,8:74:34.83:678,35,0	0/1:76,4:79:99:659,0,231	0/1:73,1:74:99:574,0,204	0/1:119,0:116:99:913,0,232	1/1:98,1:96:27.75:1336,28,0	0/1:79,5:84:99:1227,0,315	0/1:55,3:57:99:424,0,197	0/1:62,4:66:99:767,0,166	0/0:25,0:25:42.39:0,42,1459	0/1:50,2:53:99:586,0,188	0/0:23,0:23:57.06:0,57,1079	0/0:17,0:17:44.85:0,45,850	0/1:89,1:90:99:677,0,268	0/1:81,2:82:99:1134,0,218	0/1:76,0:72:99:836,0,155	0/1:111,0:110:49.23:825,0,49	0/0:51,0:51:99:0,123,2291	0/1:61,4:65:99:451,0,394	0/0:19,0:19:42.97:0,43,833	0/0:39,0:39:61.11:0,61,1875	0/1:75,1:75:99:798,0,211	0/1:37,0:37:5.80:6,0,1776	1/1:99,0:97:15.65:1397,16,0	0/0:8,0:8:24.07:0,24,582
chr10	89172247	.	GTA	G	13613.23	PASS	AB=0.956;AC=26;AF=0.464;AN=56;BaseQRankSum=8.894;DP=1771;FS=17.354;HRun=0;HaplotypeScore=606.3513;InbreedingCoeff=0.2350;MQ=47.72;MQ0=9;MQRankSum=-1.738;QD=8.90;ReadPosRankSum=-5.370;VQSLOD=3.0524;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:148,27:175:35.25:1316,35,0	1/1:29,8:36:1.64:438,2,0	0/0:35,0:12:32.54:0,33,314	0/0:26,0:8:20.89:0,21,261	1/1:71,2:73:39.29:482,39,0	0/1:78,2:80:0.40:555,0,0	0/1:72,1:74:4.78:536,0,5	0/1:106,7:110:20.18:975,0,20	1/1:75,21:94:95.48:1086,95,0	0/1:80,3:83:47.81:763,0,48	0/1:46,7:53:63.08:335,0,63	0/1:65,2:68:5.45:498,0,5	0/0:25,0:25:67.94:0,68,1060	0/1:51,2:53:3.48:397,0,3	0/0:20,0:20:44.59:0,45,761	0/0:17,0:17:35.63:0,36,632	0/1:74,12:86:61.45:799,0,61	0/1:82,0:81:8.10:734,0,8	1/1:61,14:71:27.42:1110,27,0	1/1:81,28:108:97.01:1228,97,0	0/0:51,0:51:99:0,109,1556	0/1:62,2:64:75.69:337,0,76	0/0:18,0:18:22.03:0,22,551	0/0:39,1:40:52.37:0,52,1347	0/1:71,2:72:33.33:539,0,33	0/1:35,1:36:2.91:3,0,1258	1/1:73,24:96:99:1483,105,0	0/0:9,0:9:27.06:0,27,450
chr10	89172249	.	ATG	A	7983.97	PASS	AB=0.897;AC=18;AF=0.321;AN=56;BaseQRankSum=5.910;DP=1759;FS=7.487;HRun=0;HaplotypeScore=625.5206;InbreedingCoeff=-0.5046;MQ=47.45;MQ0=9;MQRankSum=-5.447;QD=5.37;ReadPosRankSum=3.537;VQSLOD=0.7112;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:144,19:173:99:997,0,284	0/1:21,11:35:36.30:431,0,36	0/0:33,0:10:6.02:0,6,96	0/0:24,0:6:12.04:0,12,171	0/1:53,8:72:99:244,0,113	0/1:58,11:80:99:449,0,249	0/1:63,5:71:99:210,0,333	0/1:103,6:110:99:566,0,282	0/1:77,12:92:99:692,0,126	0/1:60,9:82:99:368,0,394	0/1:41,5:53:99:217,0,204	0/1:50,13:68:99:490,0,182	0/0:23,0:24:52.09:0,52,940	0/1:48,2:54:99:245,0,248	0/0:21,0:21:47.95:0,48,719	0/0:15,1:16:0.10:0,0,438	0/1:75,7:92:99:293,0,425	0/1:68,11:82:99:503,0,346	0/1:64,3:65:99:292,0,210	0/1:86,13:111:57.51:566,0,58	0/0:50,1:51:47.47:0,47,1425	0/1:52,4:64:99:208,0,400	0/0:18,0:18:30.10:0,30,466	0/0:39,1:40:16.09:0,16,1206	0/1:51,6:68:99:383,0,287	0/0:34,1:35:34.51:0,35,1082	0/1:75,16:95:99:830,0,120	0/0:9,0:9:24.08:0,24,380
chr10	89172573	.	A	AC	65564.80	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=19.943;DP=1927;FS=5.298;HRun=1;HaplotypeScore=372.3470;InbreedingCoeff=0.9995;MQ=66.88;MQ0=0;MQRankSum=-7.477;QD=38.23;ReadPosRankSum=0.531;VQSLOD=2.7731;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,89:112:99:4348,307,0	1/1:1,27:31:81.17:1162,81,0	0/0:24,0:24:62.23:0,62,783	0/0:23,0:23:63.17:0,63,780	1/1:2,76:92:99:3407,252,0	1/1:1,83:110:99:4314,304,0	1/1:6,73:103:99:3984,283,0	1/1:7,101:136:99:5109,385,0	1/1:0,84:103:99:4251,298,0	1/1:9,65:95:99:3567,265,0	1/1:4,58:80:99:3025,219,0	1/1:6,55:75:99:2705,194,0	0/0:19,0:19:57.18:0,57,738	1/1:5,73:95:99:3563,253,0	0/0:25,0:25:75.18:0,75,905	0/0:18,0:18:48.16:0,48,623	1/1:2,50:62:99:2339,163,0	1/1:6,45:67:99:2471,179,0	1/1:9,102:123:99:4641,352,0	1/1:3,104:126:99:4799,349,0	0/0:19,0:19:57.19:0,57,739	1/1:2,54:72:99:2664,190,0	0/0:19,0:19:54.16:0,54,686	0/0:13,0:13:39.13:0,39,506	1/1:0,54:79:99:3105,220,0	0/0:35,1:37:22.34:0,22,1225	1/1:4,129:153:99:6112,430,0	0/0:15,0:15:45.15:0,45,584
chr10	89172577	.	AT	A	5829.72	PASS	AB=0.836;AC=18;AF=0.321;AN=56;BaseQRankSum=-0.372;DP=1891;FS=6.770;HRun=1;HaplotypeScore=562.9548;InbreedingCoeff=-0.4728;MQ=67.07;MQ0=0;MQRankSum=-9.462;QD=3.48;ReadPosRankSum=-1.059;VQSLOD=-0.0714;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:95,23:118:99:433,0,863	0/1:26,3:29:16.15:16,0,282	0/0:23,0:23:62.26:0,62,908	0/0:25,0:25:61.57:0,62,1019	0/1:76,14:90:99:151,0,860	0/1:83,25:108:99:536,0,797	0/1:80,26:106:99:575,0,671	0/1:102,27:129:99:602,0,1089	0/1:85,18:103:99:297,0,856	0/1:69,23:92:99:489,0,819	0/1:58,19:77:99:353,0,551	0/1:58,14:72:99:267,0,539	0/0:21,0:21:63.18:0,63,960	0/1:77,18:95:99:409,0,703	0/0:23,0:23:69.22:0,69,1079	0/0:20,0:20:60.15:0,60,867	0/1:49,10:59:99:136,0,510	0/1:47,15:62:99:319,0,463	0/1:102,14:116:99:128,0,1195	0/1:105,19:124:99:117,0,1084	0/0:19,0:19:57.19:0,57,910	0/1:52,16:68:99:391,0,490	0/0:18,0:18:54.18:0,54,860	0/0:14,0:14:42.13:0,42,647	0/1:53,25:78:99:398,0,449	0/0:39,1:40:95.32:0,95,1724	0/1:126,21:146:99:213,0,1371	0/0:15,0:15:45.15:0,45,718
chr10	89173580	.	AC	A	6378.58	PASS	AB=0.846;AC=18;AF=0.321;AN=56;BaseQRankSum=20.854;DP=2093;FS=44.217;HRun=1;HaplotypeScore=540.0859;InbreedingCoeff=-0.4737;MQ=64.12;MQ0=0;MQRankSum=-15.084;QD=3.46;ReadPosRankSum=-2.215;VQSLOD=1.6681;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:200,31:231:99:148,0,8623	0/1:32,7:38:99:137,0,1384	0/0:22,0:22:66.21:0,66,991	0/0:23,0:23:66.18:0,66,971	0/1:70,21:88:99:360,0,2604	0/1:62,18:80:99:476,0,2664	0/1:77,22:99:99:583,0,3216	0/1:90,27:115:99:651,0,3726	0/1:111,16:127:99:287,0,4860	0/1:94,22:114:99:565,0,3913	0/1:49,12:59:99:173,0,1955	0/1:63,22:85:99:629,0,2579	0/0:26,0:26:78.27:0,78,1236	0/1:49,25:74:99:800,0,2031	0/0:24,0:24:72.18:0,72,1097	0/0:19,0:19:57.19:0,57,911	0/1:103,18:121:99:316,0,4315	0/1:89,12:101:99:180,0,3855	0/1:81,12:93:99:200,0,3513	0/1:101,11:98:87.38:87,0,3821	0/0:18,0:18:54.18:0,54,863	0/1:86,13:97:93.04:93,0,3651	0/0:24,0:24:72.23:0,72,1123	0/0:31,0:31:93.30:0,93,1458	0/1:60,17:73:99:374,0,2410	0/0:46,0:46:99:0,138,2203	0/1:102,17:119:99:320,0,4330	0/0:18,0:17:51.17:0,51,815
chr10	89173775	.	A	AAC	30978.35	PASS	AB=0.665;AC=19;AF=0.339;AN=56;BaseQRankSum=18.615;DP=2171;DS;FS=129.688;HRun=0;HaplotypeScore=441.1764;InbreedingCoeff=-0.5140;MQ=60.13;MQ0=1;MQRankSum=-7.107;QD=16.60;ReadPosRankSum=2.274;VQSLOD=1.3666;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:90,101:208:99:3329,0,1162	0/1:15,23:28:99:606,0,164	0/0:47,0:43:63.67:0,64,870	0/1:49,1:44:14.17:14,0,629	0/1:31,40:53:99:637,0,443	0/1:36,31:67:99:1216,0,575	0/1:52,64:120:99:2143,0,829	0/1:71,59:130:99:2517,0,928	0/1:67,68:135:99:2658,0,938	0/1:63,55:100:99:1894,0,771	0/1:28,37:57:99:738,0,399	0/1:37,34:72:99:1336,0,499	0/0:29,0:29:60.19:0,60,757	0/1:35,42:80:99:1774,0,398	0/0:24,0:24:60.19:0,60,757	0/0:29,1:30:31.38:0,31,921	0/1:48,58:114:99:2456,0,721	0/1:51,31:85:99:1605,0,756	0/1:36,30:70:99:1452,0,242	0/1:37,61:86:99:1917,0,550	0/0:71,0:70:99:0,169,2118	0/1:31,46:68:99:1143,0,301	0/0:17,0:17:42.13:0,42,530	0/0:48,0:48:99:0,120,1515	0/1:39,34:68:99:941,0,622	0/0:25,1:26:13.31:0,13,708	0/1:56,67:114:99:2604,0,317	0/0:13,0:13:25.04:0,25,345
chr10	89173840	.	G	GCA	17828.37	PASS	AB=0.733;AC=19;AF=0.339;AN=56;BaseQRankSum=22.866;DP=1982;FS=77.944;HRun=0;HaplotypeScore=528.6664;InbreedingCoeff=-0.4987;MQ=49.01;MQ0=11;MQRankSum=-12.788;QD=10.92;ReadPosRankSum=-2.811;VQSLOD=1.7293;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:95,61:151:99:1027,0,1300	0/1:16,17:29:99:656,0,207	0/0:52,0:21:54.16:0,54,676	0/1:47,0:22:2.37:2,0,316	0/1:40,29:61:99:610,0,733	0/1:60,25:69:99:463,0,542	0/1:68,47:106:99:1629,0,748	0/1:74,23:85:99:1130,0,770	0/1:68,38:94:99:716,0,638	0/1:62,34:89:99:1512,0,864	0/1:40,25:60:99:292,0,619	0/1:50,35:79:99:980,0,681	0/0:34,1:35:45.42:0,45,1159	0/1:52,35:80:99:1176,0,591	0/0:31,0:31:78.25:0,78,1014	0/0:33,1:34:87.27:0,87,1131	0/1:55,28:79:99:1215,0,683	0/1:46,23:68:99:1100,0,829	0/1:43,36:70:99:1565,0,552	0/1:48,58:93:99:949,0,869	0/0:75,0:74:99:0,187,2394	0/1:44,40:76:99:748,0,903	0/0:29,0:29:75.18:0,75,975	0/0:41,0:41:99:0,99,1253	0/1:45,28:72:99:630,0,849	0/0:36,1:37:45.37:0,45,1218	0/1:56,35:81:99:1429,0,553	0/0:14,0:14:42.14:0,42,546
chr10	89173971	.	G	GA	32036.80	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=19.657;DP=1594;FS=16.354;HRun=0;HaplotypeScore=182.6563;InbreedingCoeff=0.9950;MQ=50.80;MQ0=94;MQRankSum=-8.799;QD=24.03;ReadPosRankSum=3.846;VQSLOD=3.4168;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,111:96:99:3561,256,0	1/1:0,56:36:99:1416,99,0	0/0:19,0:18:45.14:0,45,603	0/0:21,0:19:19.90:0,20,530	1/1:0,76:49:99:1898,132,0	1/1:2,55:33:84.28:1186,84,0	1/1:2,52:35:72.16:979,72,0	1/1:5,27:12:12.49:161,12,0	1/1:0,93:60:99:2162,153,0	1/1:1,95:64:99:2310,173,0	1/1:2,71:47:99:1729,120,0	1/1:2,77:53:99:1846,129,0	0/0:31,0:31:73.29:0,73,1216	1/1:2,65:42:99:1751,123,0	0/0:33,0:33:99:0,99,1382	0/0:23,2:24:28.40:0,28,921	1/1:1,68:55:99:1782,126,0	1/1:0,51:45:99:1757,123,0	1/1:1,32:21:56.64:744,57,0	1/1:0,107:68:99:2554,179,0	0/0:31,0:31:93.25:0,93,1244	1/1:0,89:49:99:2037,141,0	0/0:25,0:25:75.23:0,75,1027	0/0:30,0:30:90.28:0,90,1237	1/1:0,82:53:99:2031,144,0	0/0:30,1:31:48.91:0,49,1214	1/1:3,103:54:99:2135,150,0	0/0:15,0:15:45.15:0,45,629
chr10	89174059	.	CA	C	3569.93	PASS	AB=0.847;AC=16;AF=0.286;AN=56;BaseQRankSum=18.288;DP=1353;FS=7.974;HRun=2;HaplotypeScore=163.4046;InbreedingCoeff=-0.3886;MQ=42.13;MQ0=66;MQRankSum=-7.937;QD=3.59;ReadPosRankSum=2.988;VQSLOD=0.2536;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:52,12:45:99:206,0,1100	0/1:29,7:20:99:179,0,484	0/0:25,0:22:66.19:0,66,936	0/0:20,0:15:45.15:0,45,675	0/1:64,21:54:99:271,0,1184	0/1:38,7:34:97.99:98,0,1112	0/1:37,11:37:59.14:59,0,1161	0/0:33,1:22:24.29:0,24,838	0/1:75,8:44:65.07:65,0,1550	0/1:63,9:50:99:202,0,1638	0/1:58,18:49:99:488,0,1122	0/1:52,8:38:99:134,0,1114	0/0:26,0:27:78.26:0,78,1169	0/1:40,4:25:5.45:5,0,916	0/0:35,0:35:99:0,102,1529	0/0:25,0:24:69.23:0,69,1034	0/1:54,14:53:99:251,0,1458	0/1:23,10:27:99:155,0,789	0/1:30,2:12:8.79:9,0,365	0/1:80,20:49:99:487,0,1087	0/0:37,0:37:99:0,108,1619	0/1:57,23:54:99:626,0,1150	0/0:24,0:24:72.23:0,72,1060	0/0:30,0:30:87.27:0,87,1258	0/1:54,14:44:99:335,0,1303	0/0:31,0:31:90.30:0,90,1349	0/0:54,5:25:21.24:0,21,759	0/0:12,0:12:36.12:0,36,540
chr10	89174749	.	ATG	A	18512.07	PASS	AB=0.785;AC=18;AF=0.321;AN=56;BaseQRankSum=34.287;DP=2424;FS=99.062;HRun=0;HaplotypeScore=982.1722;InbreedingCoeff=-0.4740;MQ=54.40;MQ0=6;MQRankSum=-31.431;QD=9.40;ReadPosRankSum=-5.966;VQSLOD=0.8793;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:132,43:173:99:1109,0,2665	0/1:32,17:49:99:828,0,359	0/0:56,0:42:79.41:0,79,1101	0/0:55,0:44:68.87:0,69,1026	0/1:64,29:92:99:585,0,1114	0/1:56,17:72:99:538,0,1045	0/1:84,24:108:99:673,0,1204	0/1:112,19:123:99:687,0,1411	0/1:94,68:161:99:2236,0,1281	0/1:94,34:127:99:1574,0,1455	0/1:65,38:103:99:1013,0,819	0/1:86,31:117:99:1186,0,1642	0/0:36,0:36:99:0,102,1640	0/1:74,31:104:99:842,0,1367	0/0:49,0:49:99:0,133,2118	0/0:42,0:42:99:0,108,1744	0/1:51,11:62:99:403,0,901	0/1:41,5:46:99:225,0,786	0/1:88,31:112:99:927,0,948	0/1:81,70:151:99:2031,0,1090	0/0:62,0:62:99:0,159,2572	0/1:83,25:109:99:747,0,1856	0/0:32,0:32:90.29:0,90,1442	0/0:70,0:70:99:0,168,2764	0/1:76,38:113:99:1327,0,1159	0/0:38,0:38:62.12:0,62,1363	0/1:84,41:125:99:1579,0,1433	0/0:13,0:13:20.70:0,21,531
chr10	89174761	.	GTC	G	13942.37	PASS	AB=0.847;AC=18;AF=0.321;AN=56;BaseQRankSum=34.604;DP=2252;FS=89.049;HRun=0;HaplotypeScore=943.8068;InbreedingCoeff=-0.4738;MQ=50.45;MQ0=6;MQRankSum=-30.895;QD=7.70;ReadPosRankSum=0.839;VQSLOD=1.1149;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:150,31:179:99:882,0,3184	0/1:33,16:49:99:775,0,460	0/0:53,0:38:73.48:0,73,1162	0/0:54,0:42:88.47:0,88,1246	0/1:78,11:88:99:363,0,1324	0/1:53,11:63:99:465,0,1207	0/1:74,22:96:99:667,0,1432	0/1:90,19:100:99:764,0,1693	0/1:123,25:147:99:1517,0,1592	0/1:87,26:112:99:1303,0,1812	0/1:80,19:99:99:651,0,915	0/1:92,25:117:99:1042,0,2070	0/0:39,0:39:99:0,114,1998	0/1:84,16:100:99:637,0,1777	0/0:50,0:50:99:0,147,2491	0/0:39,0:39:99:0,114,2056	0/1:52,11:63:99:334,0,1091	0/1:38,6:44:99:261,0,941	0/1:68,9:70:99:419,0,1195	0/1:120,18:138:99:1247,0,1419	0/0:60,0:60:99:0,171,3024	0/1:83,17:100:99:528,0,2178	0/0:32,0:32:96.27:0,96,1655	0/0:65,0:65:99:0,169,3203	0/1:80,22:101:99:901,0,1340	0/0:34,1:35:59.22:0,59,1651	0/1:101,21:122:99:1185,0,1796	0/0:13,0:13:23.68:0,24,622
chr10	89174773	.	GTCT	G	23363.37	PASS	AB=0.778;AC=18;AF=0.321;AN=56;BaseQRankSum=34.388;DP=2072;FS=160.147;HRun=0;HaplotypeScore=870.0738;InbreedingCoeff=-0.4781;MQ=51.68;MQ0=4;MQRankSum=-32.283;QD=14.27;ReadPosRankSum=5.220;VQSLOD=0.7996;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:132,47:177:99:1544,0,4085	0/1:34,15:49:99:947,0,528	0/0:40,0:32:81.21:0,81,1441	0/0:53,0:42:90.83:0,91,1626	0/1:52,27:79:99:991,0,1441	0/1:47,14:61:99:719,0,1413	0/1:63,22:85:99:1172,0,1563	0/1:66,13:74:99:773,0,2009	0/1:76,57:132:99:2647,0,1813	0/1:76,30:106:99:1788,0,2404	0/1:52,32:84:99:1209,0,1135	0/1:78,25:103:99:1369,0,2413	0/0:39,0:39:99:0,114,2455	0/1:66,23:89:99:1136,0,2016	0/0:48,0:48:99:0,138,2992	0/0:37,0:37:99:0,111,2436	0/1:46,10:56:99:605,0,1328	0/1:33,8:42:99:345,0,1073	0/1:43,14:56:99:618,0,1237	0/1:72,56:128:99:2636,0,1882	0/0:63,0:63:99:0,178,3590	0/1:73,23:96:99:989,0,2481	0/0:32,0:32:96.31:0,96,1987	0/0:66,0:66:99:0,180,3953	0/1:56,36:93:99:1782,0,1462	0/0:42,0:42:99:0,102,2246	0/1:75,42:118:99:2092,0,1904	0/0:14,0:14:8.94:0,9,773
chr10	89174783	.	TGTATG	T	33934.65	PASS	AB=0.782;AC=18;AF=0.321;AN=56;BaseQRankSum=34.835;DP=2080;FS=106.677;HRun=0;HaplotypeScore=889.5455;InbreedingCoeff=-0.4737;MQ=53.72;MQ0=3;MQRankSum=-31.282;QD=20.42;ReadPosRankSum=2.764;VQSLOD=1.1608;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:138,46:182:99:2079,0,6709	0/1:31,15:46:99:1319,0,885	0/0:40,0:35:99:0,105,2679	0/0:43,0:37:92.73:0,93,2768	0/1:46,27:73:99:1266,0,2021	0/1:51,14:64:99:1055,0,2373	0/1:73,22:95:99:1609,0,2405	0/1:80,13:91:99:1253,0,3854	0/1:72,57:129:99:3823,0,3055	0/1:88,29:118:99:3065,0,3638	0/1:43,32:75:99:1634,0,1735	0/1:82,25:106:99:1842,0,3815	0/0:40,0:40:99:0,120,3720	0/1:60,23:82:99:1520,0,3250	0/0:47,0:47:99:0,138,4418	0/0:38,0:38:99:0,114,3570	0/1:53,8:61:99:716,0,2438	0/1:35,8:43:99:519,0,1943	0/1:56,14:66:99:1318,0,2240	0/1:66,56:122:99:4001,0,2524	0/0:55,0:55:99:0,161,5020	0/1:71,23:94:99:1379,0,4062	0/0:33,0:33:99:0,99,3101	0/0:72,0:72:99:0,210,6450	0/1:54,36:90:99:2607,0,2189	0/0:38,0:38:77.97:0,78,3275	0/1:71,43:114:99:2928,0,3493	0/0:12,0:12:36.02:0,36,1027
chr10	89174877	.	AT	A	11285.14	PASS	AB=0.837;AC=19;AF=0.339;AN=56;BaseQRankSum=23.775;DP=2337;FS=13.996;HRun=1;HaplotypeScore=454.2326;InbreedingCoeff=-0.5108;MQ=66.84;MQ0=0;MQRankSum=-8.125;QD=5.45;ReadPosRankSum=2.488;VQSLOD=1.0856;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:191,45:234:99:1120,0,7376	0/1:39,12:51:99:349,0,1712	0/0:35,0:35:99:0,102,1509	0/0:34,1:35:78.63:0,79,1286	0/1:79,26:105:99:739,0,2753	0/1:64,21:84:99:627,0,2398	0/1:78,18:96:99:562,0,3018	0/1:96,43:136:99:1186,0,3718	0/1:119,36:155:99:1041,0,4986	0/1:116,36:152:99:1109,0,4774	0/1:69,14:83:99:373,0,2831	0/1:86,25:110:99:736,0,3458	0/0:25,0:25:75.26:0,75,1191	0/1:81,25:105:99:763,0,3224	0/0:36,0:36:99:0,108,1649	0/0:29,0:29:87.27:0,87,1344	0/1:90,19:109:99:490,0,3710	0/1:39,9:48:99:214,0,1703	0/1:109,12:117:78.17:78,0,4343	0/1:111,12:123:99:209,0,4617	0/0:35,0:35:99:0,105,1677	0/1:83,25:108:99:738,0,3341	0/0:25,0:25:72.21:0,72,1100	0/0:34,0:34:99:0,102,1598	0/1:62,14:76:99:364,0,2546	0/1:22,2:24:11.47:11,0,938	0/1:119,24:143:99:575,0,5177	0/0:12,0:12:36.12:0,36,575
chr10	89175006	.	TCCA	T	34056.13	PASS	AB=0.713;AC=19;AF=0.339;AN=56;BaseQRankSum=29.549;DP=2101;FS=40.985;HRun=0;HaplotypeScore=456.3191;InbreedingCoeff=-0.5136;MQ=62.92;MQ0=0;MQRankSum=-27.242;QD=18.22;ReadPosRankSum=-1.972;VQSLOD=3.1794;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:128,83:211:99:3556,0,8704	0/1:21,16:36:99:802,0,1296	0/0:30,0:30:87.30:0,87,2102	0/0:22,0:22:66.22:0,66,1543	0/1:71,45:116:99:1570,0,4378	0/1:38,34:72:99:1557,0,2555	0/1:54,41:95:99:1686,0,3709	0/1:50,71:121:99:3469,0,3156	0/1:85,41:126:99:1698,0,5832	0/1:86,42:125:99:1741,0,5247	0/1:47,30:75:99:1374,0,2814	0/1:45,40:85:99:1943,0,2924	0/0:22,0:22:66.23:0,66,1589	0/1:33,37:70:99:1573,0,2138	0/0:31,0:31:93.32:0,93,2267	0/0:28,0:28:84.29:0,84,2035	0/1:48,42:90:99:1804,0,3209	0/1:36,20:56:99:737,0,2381	0/1:63,43:106:99:2052,0,4095	0/1:94,56:146:99:2585,0,5960	0/0:50,0:50:99:0,151,3626	0/1:49,46:95:99:1929,0,3283	0/0:17,0:17:51.18:0,51,1232	0/0:23,0:23:69.24:0,69,1636	0/1:40,50:89:99:2291,0,2623	0/1:17,2:19:54.58:55,0,1200	0/1:84,41:125:99:1635,0,5356	0/0:9,0:9:27.09:0,27,636
chr10	89175344	.	A	AG	39701.30	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=10.844;DP=1915;FS=2.310;HRun=4;HaplotypeScore=335.1619;InbreedingCoeff=0.9929;MQ=60.17;MQ0=12;MQRankSum=-3.040;QD=23.19;ReadPosRankSum=3.879;VQSLOD=2.3230;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:184,31:205:99:4774,533,0	1/1:15,5:19:51.02:516,51,0	0/0:23,0:23:65.42:0,65,653	0/0:22,0:22:57.13:0,57,625	1/1:79,23:99:99:2371,237,0	1/1:68,13:79:99:1947,213,0	1/1:70,16:82:99:1805,197,0	1/1:77,20:79:99:1855,211,0	1/1:81,17:94:99:2243,243,0	1/1:79,21:93:99:2241,253,0	1/1:49,15:62:99:1568,156,0	1/1:54,13:67:99:1592,171,0	0/0:18,0:18:51.14:0,51,577	1/1:55,16:70:99:1818,189,0	0/0:20,0:20:57.16:0,57,647	0/0:10,0:10:27.06:0,27,297	1/1:102,35:133:99:3424,357,0	1/1:70,27:96:99:2457,255,0	1/1:91,10:91:99:1841,232,0	1/1:91,24:109:99:2782,285,0	0/0:32,0:32:96.27:0,96,1089	1/1:52,22:72:99:1808,180,0	0/0:19,0:19:51.14:0,51,577	0/0:21,0:21:63.12:0,63,688	1/1:64,17:76:99:2032,210,0	0/0:25,0:25:10.11:0,10,621	1/1:86,20:95:99:2626,273,0	0/0:13,0:13:39.11:0,39,442
chr10	89175345	.	G	GA	56372.97	PASS	AB=0.893;AC=37;AF=0.661;AN=56;BaseQRankSum=5.045;DP=1933;FS=1.788;HRun=1;HaplotypeScore=278.2767;InbreedingCoeff=0.9201;MQ=59.94;MQ0=14;MQRankSum=-3.750;QD=32.19;ReadPosRankSum=6.202;VQSLOD=3.8313;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:38,177:206:99:7446,488,0	1/1:6,15:20:28.81:655,29,0	0/0:24,0:23:66.18:0,66,857	0/0:22,0:22:66.17:0,66,860	1/1:29,75:103:99:3007,177,0	1/1:15,65:78:99:2916,167,0	1/1:19,67:83:99:2594,172,0	1/1:24,75:80:99:2887,228,0	1/1:22,71:90:99:3122,188,0	1/1:22,76:91:99:3334,230,0	1/1:16,46:62:99:1999,154,0	1/1:18,53:71:99:2274,152,0	0/0:18,0:18:51.17:0,51,713	1/1:18,54:72:99:2483,187,0	0/0:20,0:20:60.19:0,60,822	0/0:10,0:10:30.07:0,30,396	1/1:40,98:134:99:4497,314,0	1/1:30,63:95:99:3122,212,0	1/1:16,87:93:99:3564,235,0	1/1:26,88:108:99:3809,283,0	0/0:33,0:33:96.32:0,96,1342	1/1:23,49:71:99:2112,174,0	0/0:21,0:21:57.17:0,57,760	0/0:21,0:21:63.21:0,63,867	1/1:20,62:77:99:2784,208,0	0/1:22,3:25:68.70:69,0,811	1/1:23,83:94:99:3699,230,0	0/0:13,0:13:39.13:0,39,544
chr10	89176120	.	G	GC	29918.65	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=15.479;DP=1172;FS=0.000;HRun=0;HaplotypeScore=242.9724;InbreedingCoeff=0.9978;MQ=52.01;MQ0=9;MQRankSum=-7.621;QD=30.97;ReadPosRankSum=0.045;VQSLOD=3.7700;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,84:76:99:2817,183,0	1/1:2,30:18:45.05:683,45,0	0/0:17,0:16:41.52:0,42,420	0/0:25,0:24:58.43:0,58,672	1/1:5,67:46:90.20:1361,90,0	1/1:0,47:40:99:1674,108,0	1/1:2,52:49:99:2118,135,0	1/1:2,54:53:99:2254,153,0	1/1:2,48:45:99:1813,114,0	1/1:6,72:60:99:2590,169,0	1/1:2,34:28:57.07:849,57,0	1/1:2,39:35:81.28:1279,81,0	0/0:17,0:17:51.14:0,51,677	1/1:1,45:44:99:1573,99,0	0/0:13,0:13:39.13:0,39,543	0/0:20,1:21:15.48:0,15,787	1/1:3,45:39:99:1577,99,0	1/1:3,45:39:87.30:1387,87,0	1/1:1,45:44:99:1925,126,0	1/1:1,46:28:66.21:1028,66,0	0/0:24,0:24:72.22:0,72,985	1/1:1,49:31:72.19:1117,72,0	0/0:17,0:17:48.16:0,48,669	0/0:29,0:29:87.29:0,87,1216	1/1:4,62:47:99:1598,102,0	0/0:25,0:25:75.25:0,75,1047	1/1:4,56:56:99:2277,144,0	0/0:18,0:18:54.15:0,54,735
chr10	89176172	.	GA	G	9284.36	PASS	AB=0.754;AC=18;AF=0.321;AN=56;BaseQRankSum=-4.856;DP=1269;FS=0.799;HRun=4;HaplotypeScore=270.4950;InbreedingCoeff=-0.4737;MQ=50.31;MQ0=53;MQRankSum=-1.639;QD=8.62;ReadPosRankSum=0.651;VQSLOD=1.2833;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:54,55:92:99:1646,0,480	0/1:17,8:11:62.72:185,0,63	0/0:21,0:21:57.18:0,57,773	0/0:15,0:15:39.07:0,39,541	0/1:60,22:54:99:330,0,731	0/1:38,10:38:99:210,0,357	0/1:42,17:50:99:521,0,338	0/1:46,20:49:99:517,0,272	0/1:39,26:56:99:752,0,426	0/1:50,19:53:99:469,0,554	0/1:29,15:32:99:395,0,199	0/1:23,15:28:99:363,0,187	0/0:22,0:22:63.21:0,63,881	0/1:40,10:47:99:252,0,541	0/0:13,0:13:39.13:0,39,545	0/0:18,0:18:54.17:0,54,740	0/1:40,14:42:99:417,0,294	0/1:28,15:35:99:414,0,283	0/1:42,28:60:99:900,0,252	0/1:38,23:42:99:559,0,304	0/0:12,0:12:36.09:0,36,484	0/1:33,15:31:99:209,0,352	0/0:22,0:22:60.20:0,60,839	0/0:15,0:15:45.11:0,45,608	0/1:49,23:43:99:404,0,329	0/0:32,1:33:60.34:0,60,1243	0/1:43,27:64:99:743,0,519	0/0:21,0:21:60.20:0,60,840
chr10	89177076	.	TCTGCCTA	T	1073.54	PASS	AB=1.000;AC=12;AF=0.261;AN=46;BaseQRankSum=5.808;DP=254;FS=5.097;HRun=0;HaplotypeScore=54.9415;InbreedingCoeff=-0.0137;MQ=39.44;MQ0=34;MQRankSum=-4.947;QD=12.93;ReadPosRankSum=-4.474;VQSLOD=0.1013;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:4:14.46:32,0,14	0/0:2,0:1:3.01:0,3,51	./.	./.	1/1:1,0:1:3.01:50,3,0	1/1:3,0:3:9.03:112,9,0	0/1:13,0:5:39.47:111,0,39	./.	0/1:10,0:9:49.31:49,0,53	0/0:6,0:3:6.02:0,6,97	0/0:3,0:2:3.01:0,3,50	0/1:9,0:9:60.52:107,0,61	0/0:9,0:7:21.07:0,21,337	0/1:9,0:5:18.65:168,0,19	0/0:11,0:9:24.08:0,24,394	0/0:10,0:7:21.07:0,21,339	0/0:18,0:17:25.35:0,25,460	0/1:18,0:15:71.45:379,0,71	0/1:4,0:2:5.12:5,0,27	0/0:5,0:4:0:0,0,0	0/0:31,0:15:35.23:0,35,602	./.	0/0:5,0:4:12.03:0,12,175	0/0:26,0:22:54.91:0,55,1233	./.	0/0:5,0:2:6.02:0,6,102	0/1:10,0:10:11.51:195,0,12	0/0:5,0:2:6.02:0,6,98
chr10	89177083	.	ACTGCCCT	A	581.25	PASS	AB=0.875;AC=9;AF=0.196;AN=46;BaseQRankSum=2.857;DP=278;FS=14.862;HRun=0;HaplotypeScore=64.5044;InbreedingCoeff=0.4874;MQ=41.95;MQ0=33;MQRankSum=-3.714;QD=16.61;ReadPosRankSum=1.311;VQSLOD=0.6431;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,1:5:23.39:60,0,23	0/0:3,0:3:6.02:0,6,143	./.	./.	1/1:2,0:1:0.47:1,0,0	0/0:3,0:3:0.89:0,1,2	0/0:13,0:6:0.47:0,0,1	./.	1/1:3,7:9:6.02:133,6,0	0/0:6,0:4:9.03:0,9,229	0/0:4,0:3:3.01:0,3,101	0/0:12,0:11:6.84:0,7,45	0/0:11,0:10:24.05:0,24,533	0/0:9,0:6:1.80:0,2,11	0/0:12,0:11:27.08:0,27,791	0/0:12,0:9:21.06:0,21,584	0/0:17,0:16:36.12:0,36,1038	0/0:20,0:17:13.21:0,13,132	1/1:5,0:2:3.01:68,3,0	0/0:2,3:4:0:0,0,0	0/0:35,0:20:39.13:0,39,1174	./.	0/0:6,0:5:12.04:0,12,286	0/0:26,0:23:37.37:0,37,1033	./.	0/0:9,0:6:15.05:0,15,363	1/1:3,8:11:21.07:439,21,0	0/0:3,0:2:3.01:0,3,100
chr10	89177142	.	ATGCTGGT	A	306.79	PASS	AB=0.853;AC=3;AF=0.054;AN=56;BaseQRankSum=4.051;DP=584;FS=17.133;HRun=0;HaplotypeScore=136.6904;InbreedingCoeff=-0.0622;MQ=59.64;MQ0=2;MQRankSum=-4.402;QD=6.53;ReadPosRankSum=-0.587;VQSLOD=0.9611;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,2:20:16.21:16,0,1727	0/0:5,0:5:12.04:0,12,476	0/0:11,0:8:21.07:0,21,446	0/0:9,0:4:5.75:0,6,53	0/0:10,1:11:30.10:0,30,1122	0/0:16,0:16:45.15:0,45,1714	0/0:42,0:42:99:0,108,4061	0/1:12,6:18:99:340,0,1053	0/0:27,0:27:63.22:0,63,2442	0/0:20,0:20:54.19:0,54,2139	0/1:8,1:9:49.81:50,0,838	0/0:24,1:25:66.23:0,66,2489	0/0:24,0:24:72.25:0,72,2814	0/0:25,0:24:66.23:0,66,2618	0/0:22,0:22:60.21:0,60,2325	0/0:19,0:19:54.19:0,54,2056	0/0:35,1:36:96.33:0,96,3639	0/0:28,0:28:75.26:0,75,2901	0/0:12,1:12:24.08:0,24,946	0/0:9,0:9:24.08:0,24,949	0/0:80,0:80:99:0,229,8923	0/0:9,0:9:18.06:0,18,661	0/0:14,0:14:42.14:0,42,1625	0/0:31,0:31:87.30:0,87,3264	0/0:18,0:18:51.18:0,51,1897	0/0:20,0:20:57.19:0,57,2164	0/0:13,0:13:30.57:0,31,1107	0/0:10,0:10:30.10:0,30,1118
chr10	89178780	.	T	TAA	13132.95	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=4.380;DP=590;FS=2.091;HRun=9;HaplotypeScore=90.2337;InbreedingCoeff=0.9832;MQ=78.29;MQ0=1;MQRankSum=-1.565;QD=32.75;ReadPosRankSum=-0.875;VQSLOD=4.8538;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,38:49:99:1680,113,0	1/1:0,11:11:33.11:508,33,0	0/0:17,0:17:29.03:0,29,301	0/0:16,0:14:27.03:0,27,272	1/1:2,24:26:70.97:991,71,0	1/1:1,12:13:27.09:416,27,0	1/1:5,18:25:57.15:851,57,0	1/1:10,26:35:69.23:1054,69,0	1/1:4,12:16:30.10:462,30,0	1/1:5,22:28:66.19:972,66,0	1/1:4,11:14:30.06:435,30,0	1/1:2,19:21:45.15:693,45,0	0/0:17,0:17:8.61:0,9,460	1/1:2,14:17:45.15:675,45,0	0/0:26,0:26:72.16:0,72,766	0/0:21,1:22:11.01:0,11,529	1/1:6,31:38:66.17:982,66,0	1/1:3,22:25:57.19:878,57,0	1/1:7,13:21:45.15:670,45,0	1/1:4,16:21:48.16:723,48,0	0/0:17,0:17:48.10:0,48,502	1/1:1,8:9:24.04:343,24,0	0/0:18,0:18:39.08:0,39,415	0/0:25,0:25:57.05:0,57,589	1/1:5,10:15:33.10:479,33,0	0/0:17,0:17:42.04:0,42,436	1/1:3,11:15:20.90:323,21,0	0/0:13,0:13:39.10:0,39,415
chr10	89181172	.	AACAC	A	484	PASS	AB=0.916;AC=13;AF=0.250;AN=52;BaseQRankSum=3.744;DP=609;FS=20.271;HRun=0;HaplotypeScore=98.4159;InbreedingCoeff=0.2871;MQ=67.68;MQ0=14;MQRankSum=-0.391;QD=2.59;ReadPosRankSum=-0.276;VQSLOD=0.4758;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:27.09:0,27,558	0/0:10,0:10:12.04:0,12,254	./.	./.	0/0:20,1:21:21.57:0,22,248	1/1:22,0:22:5.14:48,5,0	0/1:27,0:26:28.24:118,0,28	0/0:25,0:22:8.82:0,9,72	1/1:16,5:21:5.92:66,6,0	0/0:27,0:27:28.33:0,28,475	0/0:21,0:21:14.75:0,15,238	1/1:14,4:18:6.01:86,6,0	0/0:13,0:13:5.89:0,6,57	1/1:20,0:20:2.99:47,3,0	0/0:19,0:19:15.05:0,15,281	0/0:27,0:27:17.33:0,17,365	0/0:24,0:23:33.03:0,33,504	0/1:19,7:23:26.45:168,0,26	0/0:14,0:11:3.01:0,3,56	0/0:25,0:25:24.08:0,24,426	0/1:26,0:25:25.25:25,0,236	0/1:7,1:8:17.87:40,0,18	0/0:13,0:13:6.02:0,6,102	0/0:19,0:26:27.60:0,28,485	0/1:17,0:18:36.49:36,0,57	0/0:25,0:24:36.12:0,36,540	0/0:18,0:20:21.07:0,21,387	0/0:15,0:14:21.07:0,21,381
chr10	89181300	.	G	GCACA	1313	PASS	AB=0.821;AC=27;AF=0.563;AN=48;BaseQRankSum=-1.488;DP=571;FS=0.000;HRun=0;HaplotypeScore=115.8428;InbreedingCoeff=0.2946;MQ=71.71;MQ0=3;MQRankSum=0.252;QD=4.42;ReadPosRankSum=-1.153;VQSLOD=2.0410;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,3:27:2.63:70,3,0	0/0:7,0:8:3:0,3,26	./.	./.	1/1:11,5:18:3.01:70,3,0	1/1:14,0:14:6.02:103,6,0	1/1:27,0:26:2.99:24,3,0	1/1:23,0:22:6.02:89,6,0	1/1:20,0:20:5.67:88,6,0	0/0:12,0:17:7.56:0,8,60	0/0:5,0:9:5.22:0,5,32	1/1:21,0:21:22.61:324,23,0	0/1:15,0:15:3.43:3,0,77	1/1:13,3:21:3.42:71,3,0	0/1:22,0:22:9.63:10,0,123	0/0:18,0:18:6:0,6,71	0/0:14,0:22:6.47:0,6,54	0/1:8,7:18:25.05:390,0,25	1/1:14,0:14:3.01:53,3,0	1/1:12,2:16:2.96:70,3,0	0/0:41,0:42:20.94:0,21,288	0/1:10,3:15:37.58:74,0,38	./.	0/0:46,0:49:35.84:0,36,480	0/1:13,0:18:6.50:6,0,15	0/0:24,0:24:17.09:0,17,254	1/1:6,0:5:2.99:23,3,0	./.
chr10	89184108	.	GT	G	7778.93	PASS	AB=0.818;AC=36;AF=0.643;AN=56;BaseQRankSum=7.666;DP=587;FS=10.414;HRun=10;HaplotypeScore=63.0682;InbreedingCoeff=0.8850;MQ=71.05;MQ0=3;MQRankSum=-0.397;QD=18.79;ReadPosRankSum=2.812;VQSLOD=5.2836;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,39:42:99:885,102,0	1/1:2,6:8:15:130,15,0	0/1:22,1:18:9.26:9,0,296	0/0:21,0:19:18.12:0,18,320	1/1:3,19:22:50.96:442,51,0	1/1:6,16:22:47.99:416,48,0	1/1:3,16:19:35.99:313,36,0	1/1:4,23:27:65.78:569,66,0	1/1:1,15:17:47.02:397,47,0	1/1:3,16:19:47.99:416,48,0	1/1:1,16:17:44.98:391,45,0	1/1:2,18:20:50.98:443,51,0	0/0:18,0:18:45.03:0,45,467	1/1:0,17:17:38.99:338,39,0	0/0:20,0:20:51.14:0,51,564	0/0:18,0:18:42.11:0,42,457	1/1:5,35:40:86.97:755,87,0	1/1:0,23:23:50.99:443,51,0	0/1:11,10:21:0.22:227,0,0	1/1:2,14:16:41.99:363,42,0	0/0:19,0:19:45.12:0,45,498	1/1:2,24:26:65.93:565,66,0	0/0:14,0:14:39.09:0,39,422	0/0:17,0:17:19.12:0,19,439	1/1:1,14:15:35.99:313,36,0	0/0:31,1:32:49.13:0,49,756	1/1:1,18:19:41.88:363,42,0	0/0:14,0:14:42.02:0,42,437
chr10	89184989	.	T	TAC	782.40	PASS	AB=0.950;AC=17;AF=0.354;AN=48;BaseQRankSum=-0.459;DP=548;FS=0.000;HRun=0;HaplotypeScore=91.0062;InbreedingCoeff=0.0036;MQ=66.44;MQ0=5;MQRankSum=-1.052;QD=2.72;ReadPosRankSum=1.578;VQSLOD=1.9183;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:5.61:0,6,64	0/1:11,0:11:0.01:0,0,0	./.	./.	0/1:13,1:15:8.13:38,0,8	0/1:21,0:21:11.43:162,0,11	0/1:24,4:31:76.71:77,0,99	0/1:17,0:17:0:0,0,0	1/1:19,0:19:15.01:158,15,0	1/1:13,0:13:0.47:1,0,0	./.	0/1:21,2:23:11.63:80,0,12	0/0:10,0:10:5.91:0,6,64	0/1:24,4:29:23.20:76,0,23	0/0:18,0:20:14.70:0,15,124	0/0:14,0:14:6.88:0,7,58	0/0:24,0:24:18.02:0,18,185	0/1:21,2:24:47.67:119,0,48	0/1:20,0:21:8.10:36,0,8	./.	0/1:34,0:34:12.60:13,0,30	0/0:9,0:14:8.52:0,9,42	0/0:10,0:12:8.69:0,9,60	0/0:33,0:35:17.66:0,18,155	0/1:15,0:15:34.24:77,0,34	0/0:20,0:20:6.01:0,6,64	1/1:14,0:14:6.02:83,6,0	0/0:4,0:5:5.85:0,6,46
chr10	89187556	.	G	GT	319.18	PASS	AB=0.789;AC=3;AF=0.054;AN=56;BaseQRankSum=6.960;DP=718;FS=1.317;HRun=2;HaplotypeScore=131.8259;InbreedingCoeff=-0.0552;MQ=71.29;MQ0=5;MQRankSum=-5.117;QD=4.37;ReadPosRankSum=-2.330;VQSLOD=-0.3188;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,117,1099	0/0:11,0:11:26.89:0,27,284	0/0:33,0:28:75.23:0,75,926	0/0:35,0:31:43.14:0,43,601	0/0:21,0:21:34.09:0,34,452	0/0:17,0:17:39.11:0,39,452	0/0:25,0:25:43.25:0,43,515	0/0:40,0:38:84.34:0,84,981	0/0:22,0:22:63.07:0,63,658	0/0:25,0:25:68.95:0,69,662	0/0:13,0:13:39.06:0,39,427	0/0:25,0:25:56.87:0,57,609	0/0:21,0:21:60.18:0,60,727	0/0:21,0:21:56.05:0,56,622	0/0:21,0:21:60.17:0,60,726	0/0:26,0:26:75.22:0,75,916	0/0:48,0:47:99:0,126,1234	0/0:20,0:20:45.14:0,45,543	0/1:14,4:18:56.16:105,0,56	0/1:20,5:24:26.56:144,0,27	0/0:34,0:34:93.28:0,93,1140	0/0:17,0:17:38.91:0,39,404	0/0:29,0:29:84.25:0,84,1027	0/0:42,0:42:99:0,120,1468	0/0:26,0:26:54.12:0,54,577	0/0:17,0:17:51.14:0,51,612	0/1:18,12:29:99:171,0,121	0/0:12,0:12:36.11:0,36,446
chr10	89187563	.	G	GGTTT	11853.53	PASS	AB=0.881;AC=37;AF=0.661;AN=56;BaseQRankSum=1.959;DP=761;FS=5.604;HRun=0;HaplotypeScore=129.7826;InbreedingCoeff=0.7329;MQ=65.11;MQ0=7;MQRankSum=-5.556;QD=22.16;ReadPosRankSum=-1.434;VQSLOD=4.2607;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,32:50:78.27:1866,78,0	1/1:5,6:11:12.04:288,12,0	0/0:35,0:27:18.01:0,18,195	0/0:32,0:28:17.32:0,17,209	1/1:6,1:22:35.05:529,35,0	1/1:8,0:27:20.66:324,21,0	1/1:11,0:31:9.03:157,9,0	1/1:40,0:38:52.27:562,52,0	0/1:10,9:19:65.59:545,0,66	1/1:6,18:24:12.27:1160,12,0	1/1:6,8:16:26.96:472,27,0	1/1:9,0:30:27.09:472,27,0	0/0:21,0:21:36.10:0,36,532	1/1:10,0:28:21.07:369,21,0	0/0:20,0:20:41.84:0,42,568	0/1:25,1:26:29.79:30,0,581	1/1:15,34:50:72.18:1672,72,0	1/1:10,0:19:12.04:209,12,0	1/1:20,0:19:24.01:384,24,0	1/1:25,0:24:48.02:693,48,0	0/0:34,0:34:69.15:0,69,965	1/1:2,0:19:32.98:531,33,0	0/0:27,0:27:45.06:0,45,696	0/0:43,0:43:93.26:0,93,1364	1/1:7,3:29:33.11:595,33,0	0/1:18,0:18:41.59:42,0,360	1/1:29,0:28:48.13:953,48,0	0/0:13,0:13:14.99:0,15,189
chr10	89188340	.	A	AC	3504.26	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-9.158;DP=638;FS=6.616;HRun=7;HaplotypeScore=95.0082;InbreedingCoeff=0.9741;MQ=80.33;MQ0=0;MQRankSum=-5.032;QD=25.96;ReadPosRankSum=-1.450;VQSLOD=3.2119;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,34:47:93.15:1102,93,0	0/0:4,0:4:12.02:0,12,116	0/0:11,0:12:14.04:0,14,121	0/0:22,0:22:23.81:0,24,256	0/0:12,0:12:27.04:0,27,261	0/0:17,0:17:48.08:0,48,463	0/0:18,0:18:51.08:0,51,492	0/0:24,0:24:51.07:0,51,492	1/1:4,22:26:54.16:652,54,0	0/0:20,0:20:51.08:0,51,492	0/0:15,0:15:42.07:0,42,405	0/0:30,0:30:87.06:0,87,827	0/0:28,0:28:78.13:0,78,753	0/0:23,0:23:66.10:0,66,637	0/0:24,0:24:63.09:0,63,608	0/0:14,0:14:42.07:0,42,405	0/0:47,0:47:99:0,117,1129	0/0:32,0:32:90.14:0,90,869	1/1:5,23:28:66.19:786,66,0	1/1:1,13:14:35.98:385,36,0	0/0:43,0:43:99:0,114,1101	0/0:26,0:26:72.10:0,72,688	0/0:12,0:12:30.03:0,30,283	0/0:27,0:27:72.08:0,72,686	0/0:20,0:21:59.13:0,59,556	0/0:27,0:27:66.10:0,66,637	1/1:3,17:19:48.15:580,48,0	0/0:5,0:5:9.01:0,9,87
chr10	89190029	.	A	AGT	8970.75	PASS	AB=0.584;AC=20;AF=0.357;AN=56;BaseQRankSum=-15.321;DP=744;FS=11.509;HRun=0;HaplotypeScore=94.6266;InbreedingCoeff=0.7346;MQ=75.72;MQ0=2;MQRankSum=-1.091;QD=32.39;ReadPosRankSum=3.305;VQSLOD=6.8821;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,99,1213	0/1:4,6:10:19.46:225,0,19	0/0:40,0:29:43.20:0,43,550	0/0:46,0:36:44.63:0,45,609	1/1:1,14:15:36.12:594,36,0	1/1:2,17:19:45.15:743,45,0	1/1:9,29:41:81.28:1333,81,0	0/0:30,0:30:53.53:0,54,645	0/0:33,0:33:93.26:0,93,1124	1/1:5,21:26:63.18:988,63,0	1/1:2,6:8:12.04:198,12,0	0/1:9,19:28:89.89:729,0,90	0/0:30,0:30:75.22:0,75,923	0/1:9,21:30:5.46:969,0,5	0/0:28,0:28:84.26:0,84,1037	0/0:21,0:21:57.18:0,57,713	1/1:10,33:43:52.80:1399,53,0	0/1:2,18:19:1.40:508,0,1	0/0:16,0:17:41.95:0,42,489	0/0:8,0:8:18.06:0,18,225	0/0:72,0:76:99:0,201,2427	1/1:4,17:21:39.13:643,39,0	0/0:12,0:12:27.09:0,27,338	0/0:35,0:35:99:0,105,1268	1/1:2,14:16:39.13:641,39,0	0/0:26,1:27:22.83:0,23,800	0/0:14,0:14:39.12:0,39,487	0/0:10,0:10:15.05:0,15,188
chr10	89192699	.	CGTGT	C	527.39	PASS	AB=0.976;AC=18;AF=0.360;AN=50;BaseQRankSum=5.287;DP=582;FS=8.365;HRun=0;HaplotypeScore=129.6413;InbreedingCoeff=0.4093;MQ=63.57;MQ0=15;MQRankSum=-2.824;QD=2.19;ReadPosRankSum=0.247;VQSLOD=2.0566;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:36.86:0,37,740	0/0:5,0:5:3:0,3,25	./.	./.	./.	1/1:8,3:12:6.01:75,6,0	0/1:16,1:17:0.02:0,0,0	0/0:15,0:14:6.02:0,6,92	1/1:13,1:16:5.99:50,6,0	0/1:28,0:26:58.74:59,0,159	0/1:15,0:13:23.08:23,0,71	1/1:7,2:10:9.01:101,9,0	0/0:13,0:15:24.08:0,24,439	1/1:9,5:13:12.03:165,12,0	0/0:27,0:26:30.10:0,30,765	0/0:18,0:18:23.22:0,23,485	0/1:41,0:41:99:115,0,451	1/1:10,1:11:3.01:47,3,0	0/0:15,0:14:12.03:0,12,132	0/0:25,0:25:19.86:0,20,334	0/1:60,0:58:21.46:21,0,425	0/1:9,0:10:0:0,0,0	0/0:12,0:14:17.80:0,18,341	0/0:46,1:48:20.35:0,20,1292	1/1:6,1:7:3:26,3,0	0/0:34,1:35:8.62:0,9,760	0/0:15,0:15:27.05:0,27,425	0/0:7,0:13:11.77:0,12,204
chr10	89192737	.	TGTGC	T	1446.48	PASS	AB=0.985;AC=19;AF=0.339;AN=56;BaseQRankSum=0.976;DP=527;FS=4.156;HRun=0;HaplotypeScore=119.1593;InbreedingCoeff=-0.1688;MQ=55.22;MQ0=10;MQRankSum=-0.128;QD=4.24;ReadPosRankSum=-1.694;VQSLOD=1.8553;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:99:182,0,461	0/0:7,0:7:2.22:0,2,7	1/1:8,0:1:2.04:6,2,0	0/1:12,0:4:2.48:2,0,17	0/0:6,0:6:2.84:0,3,18	0/1:19,0:19:22.16:22,0,62	0/0:17,0:16:20.39:0,20,131	0/0:18,0:16:41.58:0,42,307	0/1:11,0:11:3.79:16,0,4	0/1:19,2:20:16.16:355,0,16	0/1:13,1:14:9.03:179,0,9	0/1:15,0:15:21.31:21,0,85	0/0:16,0:16:36.98:0,37,518	1/1:8,0:7:11.81:102,12,0	0/1:26,0:25:7.37:7,0,929	0/1:16,0:16:7.36:7,0,500	0/1:42,2:44:99:266,0,111	0/1:7,0:7:10.04:10,0,51	0/1:18,0:17:5.15:198,0,5	0/1:16,0:15:1.75:2,0,174	0/1:59,2:60:97.96:150,0,98	0/0:6,0:6:5.90:0,6,37	0/0:13,0:13:31.08:0,31,400	0/0:43,0:42:60.72:0,61,1660	0/0:11,0:11:2.12:0,2,66	0/0:29,0:28:32.41:0,32,803	0/1:16,0:16:72:72,0,227	0/0:20,0:20:43.64:0,44,440
chr10	89192739	.	TGC	T	2394.15	PASS	AB=0.941;AC=19;AF=0.339;AN=56;BaseQRankSum=0.699;DP=536;FS=5.756;HRun=0;HaplotypeScore=108.0729;InbreedingCoeff=0.4785;MQ=57.06;MQ0=10;MQRankSum=2.271;QD=9.24;ReadPosRankSum=-0.770;VQSLOD=2.8107;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,1:28:99:257,0,141	1/1:1,6:7:3.01:38,3,0	1/1:8,0:1:2.04:6,2,0	0/1:14,0:6:10.64:11,0,14	0/0:6,0:6:2.84:0,3,18	0/0:22,0:22:14.75:0,15,87	0/0:20,0:19:23.39:0,23,156	0/0:19,0:17:38.61:0,39,286	0/0:13,0:13:5.24:0,5,21	1/1:19,1:20:50.22:437,50,0	1/1:15,1:16:35.89:316,36,0	0/0:16,0:16:24.03:0,24,124	0/0:16,0:16:26.75:0,27,312	0/0:10,0:9:3.27:0,3,8	0/0:26,0:25:50.70:0,51,632	0/1:14,0:15:16.21:16,0,267	1/1:8,35:43:50.14:563,50,0	0/0:8,0:8:16.92:0,17,89	1/1:6,13:18:38.75:337,39,0	0/1:15,0:14:7.99:8,0,36	1/1:14,44:58:30.08:361,30,0	0/0:6,0:6:5.90:0,6,37	0/0:13,0:13:16.51:0,17,196	0/0:42,0:41:61.75:0,62,999	0/0:11,0:11:12.14:0,12,79	0/0:29,0:28:32.32:0,32,456	0/1:12,4:16:39.82:228,0,40	0/0:20,0:20:32.09:0,32,295
chr10	89192795	.	A	ACTCTCTCTCT	2012.88	PASS	AB=0.860;AC=14;AF=0.269;AN=52;BaseQRankSum=0.899;DP=748;FS=0.751;HRun=0;HaplotypeScore=204.5072;InbreedingCoeff=0.5220;MQ=71.01;MQ0=26;MQRankSum=-3.837;QD=6.03;ReadPosRankSum=-3.079;VQSLOD=2.2892;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:69.49:0,69,2017	0/0:13,0:13:21.07:0,21,615	0/1:82,0:33:2.25:2,0,281	0/1:118,0:49:4.16:4,0,290	0/1:1,4:8:0:0,0,0	1/1:15,5:21:0.83:1,1,0	0/1:33,3:35:99:423,0,157	0/0:39,0:36:54.17:0,54,1316	1/1:1,8:12:12.04:509,12,0	0/0:30,0:28:72.23:0,72,2004	0/0:17,0:18:17.89:0,18,413	1/1:9,4:16:12.98:310,13,0	0/0:21,0:21:59.57:0,60,1691	1/1:1,14:17:12.87:607,13,0	0/0:21,0:21:54.61:0,55,1530	0/0:20,0:20:51.16:0,51,1290	0/0:30,0:30:42.14:0,42,1218	0/1:8,5:13:8.84:299,0,9	0/0:19,0:16:39.09:0,39,979	0/0:21,0:21:42.14:0,42,1245	0/0:43,0:42:8.56:0,9,416	./.	0/1:8,0:10:0:0,0,0	0/0:29,0:30:45.13:0,45,1270	./.	0/0:27,0:27:72.24:0,72,2085	0/0:22,0:22:48.14:0,48,1267	0/0:11,0:11:15.03:0,15,378
chr10	89192810	.	C	CTGTG	723.83	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=7.374;DP=709;FS=1.434;HRun=0;HaplotypeScore=157.4832;InbreedingCoeff=0.1430;MQ=63.41;MQ0=23;MQRankSum=-3.534;QD=4.92;ReadPosRankSum=-1.431;VQSLOD=2.7303;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.72:0,82,1488	0/0:14,0:14:26.97:0,27,320	0/0:64,0:22:20.64:0,21,385	0/0:92,0:33:30.07:0,30,367	0/1:7,0:7:6.17:6,0,43	0/1:21,0:21:6.43:6,0,110	0/0:37,0:35:17.71:0,18,157	0/0:33,0:30:81.71:0,82,1408	0/1:14,0:14:47.44:47,0,89	0/0:40,0:36:52.20:0,52,773	0/1:16,0:16:5.77:6,0,134	0/1:15,0:15:0.75:1,0,120	0/0:21,0:21:63:0,63,1185	0/1:20,0:20:56.19:56,0,102	0/0:23,0:23:66.20:0,66,1183	0/0:19,0:19:53.87:0,54,963	0/0:28,0:28:54.14:0,54,583	0/1:13,0:12:25.32:25,0,106	0/0:23,0:19:51.04:0,51,820	0/0:21,0:21:48.16:0,48,882	1/1:34,7:40:35.90:708,36,0	0/0:8,0:8:9:0,9,100	0/0:7,0:7:0:0,0,0	0/0:24,0:24:60.05:0,60,1005	0/0:10,0:10:6.01:0,6,74	0/0:30,0:30:87.28:0,87,1564	0/0:25,0:24:63.20:0,63,1124	0/0:9,0:9:24.52:0,25,344
chr10	89192899	.	ACT	A	4088.61	PASS	AB=0.944;AC=28;AF=0.500;AN=56;BaseQRankSum=7.776;DP=863;FS=1.244;HRun=0;HaplotypeScore=205.6453;InbreedingCoeff=0.8468;MQ=76.67;MQ0=21;MQRankSum=-4.452;QD=12.70;ReadPosRankSum=1.380;VQSLOD=3.6559;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,2:37:15.70:0,16,1164	1/1:0,8:8:18.06:223,18,0	0/0:89,0:42:26.22:0,26,400	0/0:120,2:60:24.09:0,24,404	1/1:1,9:10:9.03:111,9,0	1/1:8,23:31:8.97:90,9,0	1/1:13,17:29:35.98:432,36,0	0/0:51,0:49:79.37:0,79,1246	1/1:1,23:24:27.08:334,27,0	1/1:8,15:23:45.06:514,45,0	1/1:2,10:11:17.86:203,18,0	1/1:4,19:21:23.94:275,24,0	0/0:23,0:23:51.08:0,51,732	1/1:5,28:32:21.07:260,21,0	0/0:37,1:38:43.94:0,44,1108	0/0:20,0:20:51.15:0,51,794	1/1:4,24:29:54:646,54,0	1/1:3,17:18:30.09:372,30,0	0/0:14,0:14:33.02:0,33,413	0/0:21,0:21:45.02:0,45,653	0/0:45,0:45:20.81:0,21,495	1/1:0,15:15:9.03:112,9,0	0/0:14,0:14:30.09:0,30,467	0/0:37,1:38:31.37:0,31,1281	1/1:5,21:26:39.12:483,39,0	0/0:25,1:25:31.74:0,32,865	0/1:23,1:24:29.20:29,0,569	0/1:11,1:13:4.11:4,0,372
chr10	89192988	.	G	GAC	967.26	PASS	AB=0.963;AC=12;AF=0.214;AN=56;BaseQRankSum=10.879;DP=924;FS=15.458;HRun=0;HaplotypeScore=253.4640;InbreedingCoeff=0.2034;MQ=69.31;MQ0=19;MQRankSum=-1.779;QD=3.26;ReadPosRankSum=4.344;VQSLOD=0.9805;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:83.95:0,84,1148	0/0:18,0:18:38.93:0,39,477	0/0:80,0:47:55.46:0,55,847	0/0:108,0:55:48.44:0,48,675	0/0:16,0:16:5.44:0,5,43	0/1:43,0:42:34.17:292,0,34	0/1:70,0:56:13.24:59,0,13	0/0:54,0:49:99:0,142,1684	1/1:17,0:17:3.41:109,3,0	0/0:39,0:36:88.83:0,89,1153	0/0:17,0:17:8.88:0,9,112	0/1:19,0:21:2.88:100,0,3	0/1:37,4:41:51.21:51,0,644	1/1:25,0:26:18.06:140,18,0	0/0:29,1:30:41.87:0,42,580	0/0:43,2:45:47.30:0,47,1134	0/0:25,0:25:66.17:0,66,905	0/1:18,0:17:6.78:221,0,7	0/0:19,0:15:42.07:0,42,528	0/0:27,0:28:39.97:0,40,932	0/0:14,0:14:21.39:0,21,234	0/1:10,0:10:35.95:47,0,36	0/0:20,0:20:33.02:0,33,454	0/0:31,1:33:56.93:0,57,776	0/1:16,0:15:7.01:96,0,7	0/1:30,2:32:6.23:6,0,1000	0/0:28,0:28:27.14:0,27,908	0/0:16,0:16:42.05:0,42,509
chr10	89192989	.	A	ACT	2514.40	PASS	AB=0.933;AC=20;AF=0.357;AN=56;BaseQRankSum=5.935;DP=931;FS=13.000;HRun=0;HaplotypeScore=253.1978;InbreedingCoeff=0.6173;MQ=69.13;MQ0=20;MQRankSum=-2.750;QD=7.62;ReadPosRankSum=1.354;VQSLOD=1.6035;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:71.93:0,72,874	0/0:18,0:18:8.06:0,8,299	0/0:80,0:47:44.98:0,45,386	0/0:110,0:55:23.35:0,23,311	1/1:12,5:17:0.15:1,0,0	1/1:29,14:42:39.70:750,40,0	1/1:62,8:55:11.78:218,12,0	0/0:53,0:48:57.41:0,57,895	0/1:12,7:19:16.02:211,0,16	0/0:38,0:36:6.74:0,7,758	0/0:17,0:16:7.21:0,7,78	1/1:15,7:22:5.03:254,5,0	0/1:41,0:41:10.50:11,0,449	1/1:19,8:26:26.86:306,27,0	0/0:29,0:29:35.87:0,36,454	0/0:46,0:46:59.14:0,59,914	0/0:25,0:25:57.13:0,57,674	1/1:15,5:18:14.05:572,14,0	0/0:20,0:16:29.97:0,30,315	0/0:29,0:29:49.50:0,49,706	0/1:14,0:14:4.17:4,0,95	1/1:9,1:10:9.03:130,9,0	0/0:23,0:23:32.97:0,33,375	0/0:33,0:33:47.87:0,48,571	1/1:11,4:14:14.84:237,15,0	0/1:32,0:32:6.76:7,0,690	0/0:28,0:28:44.82:0,45,717	0/0:16,0:16:33.08:0,33,400
chr10	89193011	.	T	TGA	1517.09	PASS	AB=0.883;AC=20;AF=0.357;AN=56;BaseQRankSum=7.479;DP=788;FS=4.533;HRun=0;HaplotypeScore=237.4943;InbreedingCoeff=0.5363;MQ=67.13;MQ0=7;MQRankSum=-1.578;QD=4.57;ReadPosRankSum=-1.387;VQSLOD=2.2072;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:74.71:0,75,845	0/0:15,0:15:20.99:0,21,250	0/1:47,0:28:7.53:8,0,53	0/0:75,0:33:0.20:0,0,30	1/1:10,5:15:6.14:86,6,0	1/1:23,15:37:20.20:549,20,0	1/1:46,8:39:3.04:20,3,0	0/0:36,1:36:9.01:0,9,547	0/1:13,9:22:15.26:161,0,15	0/0:32,0:31:68.35:0,68,685	0/0:14,0:14:10.97:0,11,128	0/1:12,9:22:10.02:241,0,10	0/1:28,0:28:0.43:0,0,514	1/1:13,11:25:13.80:175,14,0	0/1:28,0:28:1.08:1,0,464	0/0:43,0:43:65.10:0,65,956	0/0:21,0:21:48.07:0,48,550	1/1:10,6:15:20.74:294,21,0	0/0:12,0:11:21.06:0,21,254	0/0:29,0:29:41.23:0,41,596	1/1:15,0:15:15.38:111,15,0	0/1:8,1:9:0:0,0,0	0/0:26,0:26:34.06:0,34,399	0/0:30,0:32:29.71:0,30,347	1/1:9,2:10:3.01:46,3,0	0/0:31,0:31:25.15:0,25,715	0/0:40,0:40:72.26:0,72,750	0/0:12,0:12:33.99:0,34,402
chr10	89193036	.	CTCTGTCTCTA	C	1520.50	PASS	AB=0.859;AC=14;AF=0.250;AN=56;BaseQRankSum=8.781;DP=633;FS=68.859;HRun=0;HaplotypeScore=236.2137;InbreedingCoeff=-0.0856;MQ=52.36;MQ0=47;MQRankSum=-9.147;QD=5.23;ReadPosRankSum=0.329;VQSLOD=0.2645;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,1:35:65.09:0,65,2720	0/1:10,3:13:9.68:10,0,1119	0/0:38,0:10:4.42:0,4,24	0/0:51,0:7:0.26:0,0,1	0/0:7,2:9:6.15:0,6,127	0/1:20,6:26:99:113,0,445	0/1:25,1:22:22.80:53,0,23	0/0:28,0:25:14.92:0,15,2289	1/1:16,2:18:10.65:174,11,0	0/1:25,1:26:26.52:27,0,2800	0/0:12,3:15:21.54:0,22,900	0/1:13,5:18:99:223,0,139	0/1:20,3:23:50.52:51,0,1874	0/1:18,1:18:15.28:71,0,15	0/0:25,4:28:40.68:0,41,1867	0/1:32,9:41:22.33:22,0,2649	0/0:17,0:17:45.15:0,45,1638	0/1:7,0:7:0.92:1,0,309	0/0:10,0:8:21.07:0,21,903	0/0:19,2:20:49.33:0,49,1931	0/0:17,0:16:19.42:0,19,929	0/1:1,2:3:0:0,0,0	0/0:21,3:24:46.44:0,46,2018	0/0:24,1:25:35.47:0,35,1440	0/0:5,0:4:3.48:0,3,37	0/1:30,2:32:42.35:42,0,3530	0/1:28,11:39:99:881,0,3248	0/0:17,1:17:11.40:0,11,2190
chr10	89193056	.	CTG	C	297.59	PASS	AB=0.921;AC=12;AF=0.231;AN=52;BaseQRankSum=7.516;DP=613;FS=29.270;HRun=0;HaplotypeScore=156.9558;InbreedingCoeff=0.4515;MQ=47.00;MQ0=53;MQRankSum=-4.530;QD=2.02;ReadPosRankSum=-1.360;VQSLOD=0.8124;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:54.16:0,54,955	0/0:12,0:12:27.09:0,27,490	0/1:42,0:7:11.33:11,0,105	0/0:56,0:9:2.13:0,2,43	1/1:5,1:6:3.01:43,3,0	0/1:15,3:17:23.09:23,0,24	1/1:19,4:18:7.81:62,8,0	0/0:23,0:18:45.14:0,45,781	0/1:16,2:18:19.59:42,0,20	0/0:24,0:22:46.46:0,46,1012	0/0:16,0:16:11.57:0,12,218	0/1:12,1:13:24.78:25,0,46	0/0:21,0:21:33.10:0,33,551	1/1:16,2:17:11.67:69,12,0	0/0:28,0:27:29.59:0,30,518	0/0:41,0:41:48.17:0,48,808	0/0:12,0:12:8.77:0,9,370	1/1:5,3:8:17.82:179,18,0	0/0:13,0:10:27.02:0,27,435	0/0:21,0:19:36.03:0,36,585	0/0:19,0:18:18.06:0,18,330	./.	0/0:24,0:24:35.46:0,35,543	0/0:20,0:20:21.07:0,21,376	./.	0/0:34,0:34:93.23:0,93,1538	0/0:42,0:42:96.02:0,96,1421	0/0:18,0:18:51.17:0,51,876
chr10	89198738	.	TA	T	2225.36	PASS	AB=0.904;AC=12;AF=0.214;AN=56;BaseQRankSum=7.809;DP=618;FS=3.847;HRun=9;HaplotypeScore=64.1299;InbreedingCoeff=0.8138;MQ=80.14;MQ0=0;MQRankSum=0.386;QD=15.24;ReadPosRankSum=2.599;VQSLOD=4.0180;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.23:0,78,900	1/1:1,3:4:9:82,9,0	0/0:20,0:20:38.23:0,38,384	0/1:14,2:15:6.40:6,0,187	0/0:12,0:12:24.06:0,24,268	0/0:14,0:14:27.08:0,27,312	0/0:32,0:32:93.19:0,93,1022	0/0:28,0:28:72.20:0,72,823	0/0:34,0:34:87.23:0,87,977	1/1:2,14:16:42.02:384,42,0	1/1:2,9:11:14.99:137,15,0	0/0:30,0:30:78.19:0,78,865	0/0:34,0:34:96.24:0,96,1077	0/0:21,0:21:57.10:0,57,625	1/1:4,47:51:99:1208,132,0	0/0:27,0:27:78.23:0,78,900	1/1:1,24:25:63.03:577,63,0	0/0:15,0:15:45.13:0,45,519	0/0:29,0:29:66.09:0,66,727	0/0:10,0:9:18.05:0,18,208	0/0:21,0:21:48.10:0,48,539	0/0:21,0:21:48.12:0,48,535	0/0:16,0:16:24.03:0,24,253	0/0:27,0:27:78.23:0,78,900	0/0:8,0:8:24.07:0,24,277	0/1:21,2:23:3.79:4,0,468	0/0:31,0:31:90.23:0,90,1017	0/0:13,0:13:36.06:0,36,377
chr10	89199035	.	GGGCGGCACA	G	556.33	PASS	AB=0.750;AC=12;AF=0.500;AN=24;BaseQRankSum=2.807;DP=38;FS=5.740;HRun=0;HaplotypeScore=45.3255;InbreedingCoeff=0.4502;MQ=103.92;MQ0=1;MQRankSum=-2.938;QD=34.77;ReadPosRankSum=2.807;VQSLOD=1.9310;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:5,0:3:8.95:0,9,82	0/0:5,0:2:3.01:0,3,36	0/1:3,0:3:0.16:0,0,0	1/1:2,0:2:5.95:71,6,0	0/1:0,2:2:0:0,0,0	./.	./.	./.	./.	0/0:1,0:1:0.47:0,0,1	1/1:3,0:3:9.02:174,9,0	0/0:1,0:1:0:0,0,0	./.	./.	./.	./.	1/1:0,1:1:3.01:84,3,0	./.	./.	./.	./.	0/0:1,0:1:0:0,0,0	./.	1/1:3,1:4:12:220,12,0	1/1:0,1:1:3.01:95,3,0	./.
chr10	89199039	.	GGCACA	G	420.63	PASS	AB=0.825;AC=13;AF=0.591;AN=22;BaseQRankSum=3.004;DP=42;FS=5.315;HRun=0;HaplotypeScore=47.2102;InbreedingCoeff=0.3338;MQ=119.97;MQ0=1;MQRankSum=-3.004;QD=18.29;ReadPosRankSum=2.583;VQSLOD=2.2842;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:6,0:5:2.71:3,0,110	0/0:7,0:4:2.85:0,3,20	0/1:1,1:3:0:0,0,0	1/1:1,1:2:5.62:29,6,0	0/1:2,0:2:0:0,0,0	./.	./.	./.	./.	0/0:0,1:1:0:0,0,0	1/1:2,1:3:9.03:168,9,0	./.	./.	./.	./.	./.	1/1:1,0:1:3.01:56,3,0	./.	./.	./.	./.	0/0:1,0:1:0:0,0,0	./.	1/1:2,2:4:12.02:187,12,0	1/1:1,0:1:3.01:59,3,0	./.
chr10	89199040	.	GCACATGAAAGAAAAC	G	595.96	PASS	AB=0.875;AC=20;AF=0.667;AN=30;BaseQRankSum=3.447;DP=43;FS=14.393;HRun=0;HaplotypeScore=51.7507;InbreedingCoeff=0.3101;MQ=118.56;MQ0=1;MQRankSum=-3.447;QD=22.07;ReadPosRankSum=2.355;VQSLOD=0.2486;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:1,0:1:0:0,0,0	./.	0/1:7,0:5:12.65:13,0,370	0/0:6,0:4:8.39:0,8,162	0/1:3,0:3:0.10:0,0,0	1/1:1,1:2:6.02:77,6,0	1/1:2,0:2:0.47:1,0,0	./.	./.	./.	./.	0/0:1,0:1:0.47:0,0,1	1/1:2,1:3:8.77:171,9,0	0/0:1,0:1:0:0,0,0	./.	1/1:1,0:1:2.37:8,2,0	./.	./.	1/1:1,0:1:3.01:68,3,0	./.	./.	./.	1/1:1,0:1:2.88:15,3,0	0/1:0,1:1:0:0,0,0	./.	1/1:3,1:4:11.98:282,12,0	1/1:1,0:1:3.01:52,3,0	./.
chr10	89199042	.	ACAT	A	264.72	PASS	AB=0.867;AC=13;AF=0.542;AN=24;BaseQRankSum=2.850;DP=46;FS=10.569;HRun=0;HaplotypeScore=47.0970;InbreedingCoeff=0.2932;MQ=114.68;MQ0=1;MQRankSum=-2.412;QD=10.59;ReadPosRankSum=2.763;VQSLOD=1.5856;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:8,0:5:15.40:15,0,86	0/0:9,0:4:5.99:0,6,59	0/1:1,2:3:0.09:0,0,0	1/1:2,0:2:3.84:14,4,0	0/1:2,0:2:0:0,0,0	./.	./.	./.	./.	0/0:1,0:1:0:0,0,0	1/1:3,0:3:9.02:112,9,0	0/0:0,1:1:0:0,0,0	./.	./.	./.	./.	1/1:1,0:1:3.01:42,3,0	./.	./.	./.	./.	0/0:1,0:1:0:0,0,0	./.	1/1:4,0:4:12.01:124,12,0	1/1:1,0:1:3.01:41,3,0	./.
chr10	89199051	.	A	AG	187.40	PASS	AB=0.750;AC=14;AF=0.636;AN=22;BaseQRankSum=3.154;DP=61;FS=6.864;HRun=1;HaplotypeScore=47.7976;InbreedingCoeff=0.4732;MQ=109.85;MQ0=4;MQRankSum=-2.532;QD=11.71;ReadPosRankSum=2.799;VQSLOD=1.8504;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:15,0:6:13.83:0,14,161	0/0:16,0:7:6.94:0,7,73	0/1:0,2:3:0:0,0,0	1/1:1,1:2:3:25,3,0	./.	./.	./.	./.	./.	1/1:0,0:1:0.47:1,0,0	1/1:1,2:3:9.02:100,9,0	0/1:1,0:1:0:0,0,0	./.	./.	./.	./.	1/1:0,1:1:3:26,3,0	./.	./.	./.	./.	0/0:1,0:1:0:0,0,0	./.	1/1:1,3:4:8.54:90,9,0	1/1:0,1:1:3.01:35,3,0	./.
chr10	89199101	.	AAG	A	633.03	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=5.387;DP=382;FS=10.226;HRun=0;HaplotypeScore=76.1215;InbreedingCoeff=0.6422;MQ=55.78;MQ0=32;MQRankSum=-1.979;QD=17.11;ReadPosRankSum=0.037;VQSLOD=2.7302;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.18:0,54,918	./.	0/0:67,0:15:16.34:0,16,169	0/0:93,0:19:0.59:0,1,192	0/0:7,0:7:11.93:0,12,206	0/0:9,0:9:14.35:0,14,289	0/0:16,0:15:30.45:0,30,515	0/0:15,0:14:37.89:0,38,581	0/1:4,0:4:0.72:1,0,143	1/1:5,4:9:12.34:158,12,0	1/1:1,6:7:11.73:107,12,0	0/0:10,0:10:30.08:0,30,457	0/0:8,0:8:13.60:0,14,294	0/0:4,0:4:12.04:0,12,193	1/1:2,6:8:19:238,19,0	0/0:7,0:7:12.35:0,12,188	1/1:0,9:9:21.07:276,21,0	0/0:2,0:2:6.02:0,6,103	0/0:7,0:6:1.24:0,1,226	0/0:12,0:12:27.09:0,27,448	0/0:15,0:14:30.10:0,30,494	0/0:1,0:1:3.01:0,3,51	0/0:4,0:4:2:0,2,50	0/0:10,0:9:21.07:0,21,360	0/0:4,0:4:6.02:0,6,103	0/0:17,0:17:39.58:0,40,635	0/0:13,0:12:26.64:0,27,416	0/0:3,0:3:9.02:0,9,128
chr10	89199109	.	GA	G	436.39	PASS	AB=0.851;AC=13;AF=0.232;AN=56;BaseQRankSum=9.254;DP=415;FS=152.323;HRun=1;HaplotypeScore=66.0239;InbreedingCoeff=-0.0168;MQ=55.13;MQ0=41;MQRankSum=-5.085;QD=4.32;ReadPosRankSum=1.039;VQSLOD=-0.2154;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:60.19:0,60,924	0/0:1,1:2:3.01:0,3,36	0/0:69,0:10:20.28:0,20,259	0/0:92,2:18:17.71:0,18,297	0/0:8,0:8:15.05:0,15,228	0/1:8,2:10:45.65:46,0,299	0/1:13,2:14:78.78:79,0,440	0/0:18,1:17:0.82:0,1,554	0/1:4,1:5:20.94:21,0,166	1/1:5,3:8:15.58:171,16,0	0/1:7,2:9:7.81:8,0,48	0/0:10,0:10:30.10:0,30,468	0/1:6,1:7:15.60:16,0,266	0/0:6,0:6:18.06:0,18,265	0/1:8,2:10:44.40:79,0,44	0/1:6,2:8:49.09:49,0,226	1/1:10,0:9:6.20:16,6,0	0/0:2,0:2:6.02:0,6,96	0/0:12,0:9:6.85:0,7,262	0/0:11,1:12:28.34:0,28,434	0/0:18,0:17:39.60:0,40,580	0/0:2,0:2:3.01:0,3,48	0/1:5,1:6:30.70:31,0,107	0/0:9,1:9:21.07:0,21,335	0/0:3,0:3:6.02:0,6,96	0/0:18,1:19:21.06:0,21,746	0/1:12,1:12:75.46:75,0,395	0/0:4,0:4:12.04:0,12,181
chr10	89200577	.	GCA	G	96.70	PASS	AB=0.924;AC=9;AF=0.167;AN=54;BaseQRankSum=-0.336;DP=393;FS=2.128;HRun=0;HaplotypeScore=79.9946;InbreedingCoeff=-0.1635;MQ=59.43;MQ0=8;MQRankSum=2.483;QD=0.92;ReadPosRankSum=1.857;VQSLOD=1.0715;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:16:5.82:6,0,17	0/0:7,0:7:4.54:0,5,83	0/0:22,0:9:1.06:0,1,11	./.	0/0:5,0:5:4.83:0,5,49	0/1:8,3:11:21.61:22,0,125	0/1:15,0:15:9.94:10,0,254	0/0:26,0:25:33.29:0,33,175	0/0:12,0:12:18.01:0,18,163	0/0:13,0:13:9.02:0,9,91	0/1:7,0:7:9.46:9,0,110	0/0:12,0:12:6.15:0,6,89	0/1:4,0:4:1.85:2,0,83	0/0:7,0:7:2.33:0,2,25	0/0:12,0:12:6.01:0,6,60	0/1:4,2:6:55.27:55,0,67	0/0:25,0:24:41.92:0,42,337	0/0:23,0:22:22.04:0,22,175	0/0:13,0:13:14.40:0,14,103	0/0:10,0:10:2.95:0,3,24	0/1:22,0:21:2.71:18,0,3	0/0:12,0:12:13.80:0,14,129	0/0:15,0:15:24.08:0,24,361	0/0:12,0:12:12.04:0,12,180	0/1:8,0:8:14.71:15,0,46	0/1:10,3:14:83.76:84,0,200	0/0:11,0:10:17.79:0,18,147	0/0:4,0:4:9.03:0,9,131
chr10	89200612	.	C	CACCA	6790.38	PASS	AB=0.860;AC=36;AF=0.643;AN=56;BaseQRankSum=0.435;DP=348;FS=6.554;HRun=0;HaplotypeScore=83.6053;InbreedingCoeff=0.5928;MQ=49.14;MQ0=14;MQRankSum=-2.388;QD=26.95;ReadPosRankSum=0.074;VQSLOD=3.9062;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:11:16.07:164,16,0	1/1:0,3:5:14.74:239,15,0	0/0:22,0:8:24.08:0,24,312	0/0:23,0:6:12.62:0,13,154	0/1:7,1:8:18.24:66,0,18	0/0:10,0:10:21.05:0,21,335	0/0:12,0:12:29.56:0,30,448	1/1:23,0:31:85.81:1114,86,0	1/1:1,8:10:21.03:488,21,0	1/1:6,1:13:35.99:573,36,0	1/1:3,2:6:15.39:297,15,0	1/1:2,1:7:11.95:170,12,0	0/0:3,0:3:5.25:0,5,124	1/1:2,4:7:3.90:89,4,0	1/1:1,3:6:6.45:107,6,0	0/1:7,0:7:15.64:16,0,272	1/1:15,8:30:68.59:1295,69,0	1/1:2,12:18:23.28:527,23,0	1/1:14,0:19:45.32:578,45,0	1/1:2,0:8:3.01:36,3,0	1/1:17,0:17:26.76:284,27,0	0/1:2,6:11:19.08:180,0,19	0/0:13,0:13:30.10:0,30,535	0/0:7,0:7:15.05:0,15,260	1/1:7,0:9:12.47:127,12,0	0/1:13,0:13:37.68:38,0,483	1/1:4,0:9:24.55:403,25,0	0/0:6,0:6:18.06:0,18,284
chr10	89200626	.	T	TAATAA	879.19	PASS	AB=0.919;AC=8;AF=0.148;AN=54;BaseQRankSum=0.859;DP=263;FS=14.239;HRun=0;HaplotypeScore=91.8196;InbreedingCoeff=0.0326;MQ=51.70;MQ0=7;MQRankSum=-3.070;QD=11.88;ReadPosRankSum=-1.648;VQSLOD=1.4966;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,1:10:99:147,0,259	0/0:2,0:2:6.02:0,6,106	0/1:16,0:8:7.89:8,0,199	0/0:13,0:7:9.03:0,9,130	0/1:7,0:7:40.55:99,0,41	0/0:8,0:8:21.06:0,21,367	0/0:7,0:7:21.06:0,21,337	0/0:27,0:26:68.33:0,68,947	0/0:5,0:5:7.88:0,8,101	0/0:8,0:8:18.01:0,18,220	0/0:3,0:3:9.03:0,9,152	0/1:5,0:5:64.43:64,0,99	0/0:2,0:2:6.02:0,6,112	./.	0/0:3,0:3:6.02:0,6,87	0/0:7,0:7:21.07:0,21,331	0/0:35,0:35:79.11:0,79,1355	0/1:17,0:16:99:168,0,221	0/0:13,0:13:36.12:0,36,615	0/0:6,0:6:12.03:0,12,135	0/0:8,0:7:17.07:0,17,203	0/0:7,0:7:14.39:0,14,183	0/0:6,0:6:9.11:0,9,131	1/1:6,0:6:7.57:36,8,0	0/1:5,4:9:14.84:488,0,15	0/0:9,0:9:27.09:0,27,414	0/0:9,0:8:12.04:0,12,207	0/0:5,0:5:15.05:0,15,296
chr10	89200648	.	TAATAATAATAATAA	T	2167.38	PASS	AB=1.000;AC=9;AF=0.173;AN=52;BaseQRankSum=2.623;DP=215;FS=0.000;HRun=0;HaplotypeScore=97.9785;InbreedingCoeff=0.3741;MQ=57.24;MQ0=0;MQRankSum=2.954;QD=29.69;ReadPosRankSum=-1.545;VQSLOD=2.4035;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:9:27.09:0,27,824	0/0:2,0:2:6.02:0,6,262	0/0:1,0:1:3.01:0,3,42	0/0:4,0:4:12.04:0,12,188	0/0:9,0:9:21.07:0,21,557	0/0:8,0:8:24.08:0,24,1306	0/0:6,0:6:18.06:0,18,754	0/1:32,0:31:99:417,0,916	0/0:3,0:3:9.03:0,9,296	0/1:2,0:2:36.60:37,0,90	0/1:3,0:3:33.25:33,0,145	0/0:2,0:2:6.02:0,6,196	0/0:1,0:1:3.01:0,3,197	0/0:5,0:5:12.04:0,12,181	0/0:1,0:1:2.94:0,3,18	0/0:2,0:2:6.02:0,6,304	0/0:35,0:35:8.91:0,9,1278	0/0:20,0:19:52.73:0,53,1906	1/1:3,15:18:45.08:1032,45,0	1/1:1,8:9:18.06:419,18,0	./.	./.	0/0:3,0:3:6.02:0,6,251	0/0:6,0:6:9.03:0,9,533	0/0:9,0:9:27.09:0,27,1352	0/0:4,0:4:9.03:0,9,384	1/1:0,9:9:8.75:374,9,0	0/0:9,0:9:27.09:0,27,1299
chr10	89200657	.	TAATAA	T	2767.09	PASS	AB=1.000;AC=15;AF=0.288;AN=52;BaseQRankSum=6.912;DP=238;FS=0.584;HRun=0;HaplotypeScore=60.0268;InbreedingCoeff=0.7300;MQ=62.45;MQ0=0;MQRankSum=1.868;QD=25.62;ReadPosRankSum=1.872;VQSLOD=3.3399;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:13:30.10:0,30,454	./.	0/0:3,0:3:9.03:0,9,125	0/0:4,0:4:12.04:0,12,159	0/0:11,0:11:27.04:0,27,334	0/0:9,0:9:24.08:0,24,545	0/0:9,0:9:27.09:0,27,504	1/1:5,27:31:72.17:1050,72,0	0/0:2,0:2:6.02:0,6,76	1/1:3,0:3:7.58:89,8,0	0/1:3,0:3:8.25:36,0,8	0/0:2,0:2:6.02:0,6,117	0/0:1,0:1:3.01:0,3,71	0/0:7,0:7:18.06:0,18,251	1/1:2,0:2:6.02:85,6,0	0/0:3,0:3:6.02:0,6,133	1/1:3,33:36:39.13:753,39,0	0/0:22,0:21:45.15:0,45,826	1/1:15,0:15:45.08:591,45,0	1/1:8,0:8:16.87:216,17,0	./.	0/0:1,0:1:3.01:0,3,42	0/0:4,0:4:8.82:0,9,97	0/0:7,0:7:12.04:0,12,271	0/0:10,0:10:30.02:0,30,585	0/0:7,0:7:15.05:0,15,259	1/1:9,0:9:8.85:124,9,0	0/0:9,0:9:27.09:0,27,525
chr10	89200660	.	TAA	T	2097.19	PASS	AB=1.000;AC=18;AF=0.333;AN=54;BaseQRankSum=8.292;DP=240;FS=5.451;HRun=4;HaplotypeScore=50.3046;InbreedingCoeff=0.6759;MQ=62.48;MQ0=0;MQRankSum=1.382;QD=18.56;ReadPosRankSum=1.705;VQSLOD=0.2909;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:13:28.25:0,28,368	0/0:2,0:2:2.98:0,3,21	0/0:3,0:3:9.03:0,9,125	0/0:4,0:4:12.04:0,12,159	0/0:11,0:11:7.10:0,7,247	0/0:9,0:9:24.08:0,24,395	0/0:10,0:10:30.10:0,30,461	1/1:31,0:30:47.06:909,47,0	0/1:2,0:2:3.82:4,0,36	1/1:0,3:3:9.03:128,9,0	1/1:0,4:4:7.27:89,7,0	0/0:2,0:2:6.02:0,6,97	0/0:1,0:1:3.01:0,3,56	0/0:7,0:7:18.06:0,18,251	1/1:2,0:2:6.02:85,6,0	0/0:4,0:4:12.04:0,12,181	1/1:35,0:35:37.84:297,38,0	0/0:21,0:20:22.48:0,22,696	1/1:15,0:15:44.91:486,45,0	1/1:8,0:8:15.02:190,15,0	./.	0/0:2,0:2:6.02:0,6,84	0/1:4,0:4:32.59:33,0,75	0/0:7,0:7:12.03:0,12,160	0/0:10,0:10:11.36:0,11,345	0/0:7,0:7:15:0,15,223	1/1:9,0:9:8.83:62,9,0	0/0:10,0:10:30.10:0,30,461
chr10	89200662	.	A	AT	1887.83	PASS	AB=0.875;AC=21;AF=0.389;AN=54;BaseQRankSum=7.992;DP=248;FS=5.788;HRun=0;HaplotypeScore=48.9269;InbreedingCoeff=0.2815;MQ=66.34;MQ0=0;MQRankSum=1.112;QD=10.91;ReadPosRankSum=0.272;VQSLOD=3.3774;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:10,3:11:38.44:38,0,304	0/0:1,0:1:2.94:0,3,18	0/0:5,0:5:12.03:0,12,150	0/0:4,0:4:12.04:0,12,159	0/1:7,4:11:64.69:65,0,235	0/0:9,0:9:27.08:0,27,360	0/0:10,0:10:30.10:0,30,418	1/1:29,0:28:38.68:896,39,0	0/1:3,1:4:35.75:41,0,36	1/1:3,0:3:9.03:128,9,0	1/1:5,0:5:6.38:51,6,0	0/0:2,0:2:6.02:0,6,83	0/0:2,0:2:6:0,6,66	0/0:7,0:7:21.06:0,21,275	1/1:0,2:2:6.02:85,6,0	0/0:4,0:4:12.04:0,12,167	0/1:35,0:35:20.94:91,0,21	0/1:21,2:22:18.33:18,0,584	1/1:15,0:15:28.31:381,28,0	1/1:8,0:8:14.41:178,14,0	./.	0/0:2,0:2:6.02:0,6,84	0/1:4,0:4:29.59:30,0,96	0/0:7,0:7:5.81:0,6,76	0/1:10,2:12:59.16:59,0,173	0/0:7,0:7:17.96:0,18,234	1/1:9,0:9:0.34:2,0,0	0/0:13,0:13:33.10:0,33,443
chr10	89201938	.	TACCACCACCACCACCACC	T	1667.84	PASS	AB=0.960;AC=15;AF=0.313;AN=48;BaseQRankSum=4.966;DP=245;FS=1.488;HRun=0;HaplotypeScore=116.2209;InbreedingCoeff=0.5080;MQ=88.84;MQ0=2;MQRankSum=-4.447;QD=20.34;ReadPosRankSum=1.750;VQSLOD=2.2309;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:11:9.03:0,9,444	0/0:1,0:1:1.25:0,1,3	0/0:24,0:19:1.25:0,1,3	./.	1/1:5,3:9:3.01:49,3,0	0/0:8,0:8:9.03:0,9,689	0/0:16,0:16:8.39:0,8,287	0/0:6,0:6:1.36:0,1,4	1/1:6,3:9:9.03:435,9,0	0/0:7,0:7:6.02:0,6,366	0/0:5,0:5:3.01:0,3,74	1/1:2,6:8:9.03:435,9,0	0/0:5,0:5:10.28:0,10,640	1/1:5,6:11:6.02:290,6,0	0/0:6,0:6:6.02:0,6,143	0/0:7,0:7:17.09:0,17,796	./.	1/1:7,0:7:6.02:78,6,0	0/0:11,0:11:10.28:0,10,535	0/0:7,0:7:6.02:0,6,152	0/1:23,1:24:93.05:93,0,137	1/1:0,3:3:6.02:290,6,0	./.	0/0:11,0:11:9.03:0,9,432	1/1:7,4:11:3.01:145,3,0	0/0:7,0:7:10.28:0,10,603	0/0:6,0:6:3.01:0,3,43	./.
chr10	89202455	.	A	AAC	2757.64	PASS	AB=0.825;AC=18;AF=0.333;AN=54;BaseQRankSum=-2.558;DP=776;FS=4.052;HRun=0;HaplotypeScore=136.2711;InbreedingCoeff=0.2696;MQ=73.64;MQ0=13;MQRankSum=-1.744;QD=7.47;ReadPosRankSum=-0.943;VQSLOD=3.2459;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:45:21.03:232,21,0	0/1:7,3:10:35.94:36,0,50	./.	0/0:43,0:36:3.01:0,3,33	0/1:15,0:18:11.45:11,0,31	0/0:16,0:31:12.32:0,12,97	0/0:19,0:29:17.04:0,17,84	1/1:36,0:34:8.48:53,8,0	0/0:17,0:34:39.84:0,40,213	1/1:13,17:31:19.64:473,20,0	1/1:4,6:10:6.02:90,6,0	0/1:28,0:31:14.79:15,0,203	0/0:15,0:16:22.89:0,23,194	0/0:17,0:21:23.90:0,24,245	0/1:19,12:30:27.95:330,0,28	0/0:31,0:32:48.36:0,48,465	0/1:14,13:27:9.17:290,0,9	0/0:8,0:13:17.52:0,18,85	0/1:18,2:19:64.20:114,0,64	0/1:14,9:22:45.03:323,0,45	1/1:54,11:62:10.21:648,10,0	0/0:13,0:26:11.32:0,11,55	0/0:23,0:22:27.41:0,27,279	0/0:37,0:38:55.01:0,55,464	0/0:6,0:19:11.02:0,11,51	0/0:33,0:34:22.84:0,23,425	0/1:14,4:17:28.74:320,0,29	0/0:11,0:11:24.45:0,24,234
chr10	89202717	.	T	TAC	10219.55	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-15.102;DP=1049;FS=35.502;HRun=0;HaplotypeScore=159.2934;InbreedingCoeff=0.9998;MQ=57.99;MQ0=6;MQRankSum=-0.719;QD=30.97;ReadPosRankSum=3.973;VQSLOD=3.4331;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:73.62:0,74,966	0/0:10,0:10:27.09:0,27,347	0/0:36,0:26:56.95:0,57,683	0/0:45,0:30:41.16:0,41,688	1/1:7,32:38:66.22:1110,66,0	0/0:30,0:30:72.23:0,72,927	0/0:28,0:28:59.86:0,60,758	0/0:39,0:39:99:0,105,1320	1/1:5,40:44:87.30:1466,87,0	0/0:45,0:45:99:0,123,1485	0/0:18,0:18:45.13:0,45,564	1/1:10,34:44:81.19:1349,81,0	0/0:48,0:48:99:0,126,1621	1/1:7,30:37:60.21:1008,60,0	0/0:68,0:67:99:0,159,2029	0/0:44,0:44:99:0,114,1426	0/0:43,0:43:94.35:0,94,1229	1/1:7,25:32:46.90:1043,47,0	0/0:17,0:17:43.35:0,43,526	0/0:23,0:23:63.20:0,63,811	1/1:13,61:74:99:1870,110,0	1/1:1,33:34:78.27:1316,78,0	0/0:27,0:27:72.22:0,72,912	0/0:48,0:48:99:0,105,1336	1/1:6,17:22:63.22:1058,63,0	0/0:58,0:58:99:0,129,1787	0/0:27,0:27:75.22:0,75,937	0/0:28,0:28:81.26:0,81,1042
chr10	89202818	.	A	ACACTCACGCT	15301.57	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=1.988;DP=935;FS=6.593;HRun=0;HaplotypeScore=289.6762;InbreedingCoeff=0.8772;MQ=57.17;MQ0=2;MQRankSum=-14.993;QD=63.76;ReadPosRankSum=-3.520;VQSLOD=2.9300;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,123,4017	0/0:7,0:7:21.07:0,21,668	0/0:53,0:47:99:0,100,2974	0/0:48,0:40:88.67:0,89,2214	1/1:17,14:31:54.20:1900,54,0	0/0:28,0:28:78.25:0,78,2378	0/0:31,0:31:87.25:0,87,2473	0/0:39,0:39:96.24:0,96,2532	1/1:5,21:28:45.15:2093,45,0	0/0:49,0:49:99:0,147,4476	0/0:8,0:8:21.07:0,21,692	1/1:18,15:33:75.19:2770,75,0	0/0:28,0:28:78.25:0,78,2248	1/1:14,14:29:63.19:2499,63,0	0/0:52,0:52:99:0,151,4745	0/0:41,1:42:1.23:0,1,3477	0/0:32,0:31:96.31:0,96,2795	0/1:10,0:10:11.34:499,0,11	0/0:17,0:17:44.73:0,45,1158	0/0:30,0:30:90.31:0,90,2867	1/1:25,13:38:53.46:1725,53,0	1/1:8,24:37:36.12:1549,36,0	0/0:27,0:27:72.04:0,72,2193	0/0:52,0:52:99:0,144,4194	1/1:4,22:34:54.19:2265,54,0	0/0:55,0:55:99:0,163,4975	0/0:30,0:30:84.29:0,84,2590	0/0:19,0:19:48.12:0,48,1225
chr10	89202892	.	T	TCACACA	5270.20	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=9.439;DP=799;FS=2.381;HRun=0;HaplotypeScore=225.8597;InbreedingCoeff=0.8504;MQ=57.42;MQ0=11;MQRankSum=-6.816;QD=13.31;ReadPosRankSum=-9.436;VQSLOD=1.6508;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:52:60.60:0,61,896	1/1:9,0:9:2.79:95,3,0	0/0:42,0:23:10.94:0,11,143	0/0:45,0:25:21.24:0,21,240	1/1:25,0:25:11.48:98,11,0	0/0:21,0:22:34.91:0,35,607	0/0:26,0:28:48.09:0,48,761	1/1:32,0:32:46.47:488,46,0	1/1:21,0:22:18.20:173,18,0	1/1:25,0:25:59.98:865,60,0	1/1:2,10:14:9.95:125,10,0	1/1:19,0:19:18.03:287,18,0	0/0:34,0:36:90.20:0,90,1601	1/1:17,0:20:26.33:440,26,0	1/1:13,26:42:24.08:674,24,0	0/0:29,0:29:66.18:0,66,1257	1/1:20,0:21:20.55:287,21,0	1/1:5,0:6:3.01:78,3,0	1/1:11,10:21:41.60:470,42,0	1/1:8,15:24:12.04:298,12,0	0/1:35,0:34:31.70:32,0,267	1/1:36,0:38:47.27:429,47,0	0/0:26,0:27:62.11:0,62,1031	0/0:55,0:56:99:0,102,1951	1/1:20,0:21:19.07:163,19,0	0/0:42,0:42:70.21:0,70,1456	1/1:15,0:16:18.26:267,18,0	0/0:23,0:24:50.83:0,51,1161
chr10	89202913	.	CAT	C	4331.68	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=6.338;DP=741;FS=2.446;HRun=0;HaplotypeScore=152.8380;InbreedingCoeff=0.5887;MQ=61.05;MQ0=7;MQRankSum=-4.217;QD=10.12;ReadPosRankSum=-1.739;VQSLOD=4.5476;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:47,0:47:61.77:190,0,62	1/1:9,0:9:11.97:111,12,0	0/0:31,0:21:43.17:0,43,569	0/0:35,0:24:57.97:0,58,732	1/1:25,0:25:31.07:241,31,0	0/0:22,0:22:48.96:0,49,764	0/0:20,0:20:36.95:0,37,766	1/1:31,0:31:39.78:497,40,0	1/1:20,0:20:22.69:246,23,0	1/1:32,0:31:63.36:589,63,0	0/1:14,0:14:19.82:74,0,20	1/1:21,0:20:18.12:185,18,0	0/0:33,0:33:72.97:0,73,1378	0/1:22,0:22:36.06:65,0,36	0/1:37,0:36:1.51:186,0,2	0/0:30,0:30:87.17:0,87,1351	1/1:15,0:15:3.98:83,4,0	0/1:6,0:6:9.46:36,0,9	1/1:25,0:22:43.14:300,43,0	0/1:18,0:17:4.72:142,0,5	1/1:23,14:36:30.43:602,30,0	1/1:30,0:30:35.19:363,35,0	0/0:29,0:29:69.90:0,70,1153	0/0:42,0:42:99:0,102,1839	1/1:21,0:21:14.57:196,15,0	0/0:38,0:38:99:0,104,1654	1/1:18,0:18:9.70:227,10,0	0/0:31,0:31:78.53:0,79,1265
chr10	89203408	.	TAATAAATA	T	315	PASS	AC=8;AF=0.174;AN=46;BaseQRankSum=3.403;DP=213;FS=7.074;HRun=0;HaplotypeScore=55.1782;InbreedingCoeff=0.4537;MQ=39.22;MQ0=22;MQRankSum=-3.621;QD=13.12;ReadPosRankSum=1.610;VQSLOD=0.3411;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,1:2:3.01:75,3,0	./.	./.	0/0:5,0:4:3.01:0,3,123	0/0:8,0:7:15.05:0,15,562	0/0:4,0:3:3.01:0,3,123	0/0:32,0:16:15.05:0,15,333	0/0:6,0:6:3.01:0,3,123	1/1:0,2:2:6.02:150,6,0	1/1:11,1:12:3.01:75,3,0	0/0:7,0:7:9.03:0,9,345	0/0:3,0:3:3.01:0,3,123	0/0:6,0:6:3.01:0,3,123	1/1:7,1:8:6.02:131,6,0	0/0:11,0:11:12.04:0,12,492	0/0:13,0:8:0.89:0,1,2	0/0:19,0:19:27.09:0,27,974	0/0:13,0:12:15.05:0,15,615	./.	./.	0/0:7,0:7:0.47:0,0,1	0/0:5,0:4:3.01:0,3,123	0/0:2,0:2:3.01:0,3,123	0/0:9,0:8:9.50:0,10,370	0/0:4,0:4:3.01:0,3,123	0/0:6,0:6:18.06:0,18,717	0/0:9,0:9:18.06:0,18,679
chr10	89205534	.	TAATC	T	5493.53	PASS	AB=0.923;AC=15;AF=0.268;AN=56;BaseQRankSum=11.437;DP=523;FS=3.192;HRun=0;HaplotypeScore=88.7928;InbreedingCoeff=0.9084;MQ=73.87;MQ0=3;MQRankSum=-1.506;QD=40.10;ReadPosRankSum=4.530;VQSLOD=5.2120;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.25:0,72,1815	0/0:11,0:11:33.11:0,33,856	0/0:21,0:21:62.58:0,63,1490	0/0:10,0:10:27.09:0,27,728	1/1:0,11:11:27.09:512,27,0	0/0:22,0:22:63.20:0,63,1638	0/0:25,0:25:72.25:0,72,1922	0/0:51,0:51:99:0,138,3622	1/1:0,18:18:45.15:854,45,0	0/0:33,0:32:90.30:0,90,2360	0/0:14,0:14:42.14:0,42,1101	1/1:1,17:18:42.10:760,42,0	0/0:17,0:17:51.18:0,51,1333	1/1:3,13:14:36.08:646,36,0	0/0:11,0:11:33.11:0,33,890	0/1:11,1:12:23.86:24,0,732	0/0:16,0:16:45.15:0,45,1189	1/1:5,21:26:31.03:837,31,0	0/0:20,0:20:60.21:0,60,1554	0/0:22,0:22:66.23:0,66,1731	0/0:13,0:12:33.11:0,33,861	1/1:0,23:23:69.15:1235,69,0	0/0:16,0:16:45.15:0,45,1214	0/0:12,0:12:33.11:0,33,879	1/1:0,13:13:33.11:626,33,0	0/0:17,0:17:48.15:0,48,1232	0/0:20,0:20:60.19:0,60,1478	0/0:9,0:9:27.09:0,27,728
chr10	89205593	.	TAG	T	989.89	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.224;DP=620;FS=0.000;HRun=0;HaplotypeScore=85.7289;InbreedingCoeff=0.9992;MQ=83.54;MQ0=2;MQRankSum=-3.642;QD=34.13;ReadPosRankSum=1.020;VQSLOD=5.8896;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:29:75.24:1085,75,0	0/0:11,0:11:33.11:0,33,618	0/0:22,0:22:56.78:0,57,1016	0/0:27,0:27:69.24:0,69,1265	0/0:22,0:22:63.22:0,63,1179	0/0:25,0:25:72.25:0,72,1339	0/0:20,0:20:51.15:0,51,892	0/0:19,0:19:51.17:0,51,950	0/0:20,0:20:51.17:0,51,947	0/0:27,0:27:78.26:0,78,1431	0/0:24,0:24:72.23:0,72,1299	0/0:21,0:21:60.11:0,60,1034	0/0:24,0:24:69.24:0,69,1291	0/0:20,0:18:54.19:0,54,1010	0/0:29,0:29:87.30:0,87,1621	0/0:22,0:22:63.22:0,63,1172	0/0:25,0:25:72.25:0,72,1339	0/0:26,0:26:75.26:0,75,1385	0/0:18,0:18:45.15:0,45,817	0/0:30,0:30:87.28:0,87,1587	0/0:14,0:14:42.13:0,42,755	0/0:23,0:23:60.21:0,60,1122	0/0:21,0:21:60.21:0,60,1123	0/0:17,0:17:48.16:0,48,899	0/0:12,0:11:30.09:0,30,530	0/0:25,0:25:75.26:0,75,1373	0/0:31,0:30:90.31:0,90,1665	0/0:16,0:16:48.15:0,48,860
chr10	89206302	.	TG	T	6271.66	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=12.582;DP=429;FS=0.877;HRun=9;HaplotypeScore=59.2541;InbreedingCoeff=0.9532;MQ=68.04;MQ0=0;MQRankSum=-0.859;QD=22.56;ReadPosRankSum=1.852;VQSLOD=5.7275;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:75.19:0,75,845	1/1:1,2:3:6:55,6,0	0/0:5,0:6:5.60:0,6,42	0/0:6,0:6:7.77:0,8,58	1/1:1,10:11:27.48:246,27,0	0/0:10,0:10:30.09:0,30,346	0/0:21,0:21:54.16:0,54,622	1/1:3,8:11:26.88:235,27,0	1/1:3,13:16:36.02:329,36,0	1/1:4,9:13:27.01:247,27,0	1/1:1,9:10:27.01:247,27,0	1/1:0,19:19:57.03:520,57,0	0/0:13,0:13:33.08:0,33,371	1/1:1,20:21:57.02:522,57,0	1/1:1,9:10:21.01:192,21,0	0/0:12,0:12:36.11:0,36,415	1/1:5,24:30:74.07:665,74,0	1/1:1,30:31:87.04:796,87,0	1/1:1,5:6:15:134,15,0	1/1:2,13:15:30.01:274,30,0	1/1:6,26:32:69.02:630,69,0	1/1:1,12:13:33.02:302,33,0	0/0:10,0:10:27.08:0,27,312	0/0:22,0:22:48.14:0,48,554	1/1:1,21:22:57.03:521,57,0	0/0:11,0:11:21.06:0,21,242	1/1:1,14:15:39.02:357,39,0	0/0:8,0:8:24.04:0,24,263
chr10	89206405	.	TC	T	3552.50	PASS	AB=0.535;AC=15;AF=0.288;AN=52;BaseQRankSum=6.271;DP=405;FS=5.979;HRun=4;HaplotypeScore=48.9806;InbreedingCoeff=0.8835;MQ=45.52;MQ0=46;MQRankSum=-2.857;QD=25.93;ReadPosRankSum=-1.440;VQSLOD=1.7944;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:60.20:0,60,839	0/0:6,0:6:18.06:0,18,252	./.	./.	1/1:2,20:22:48.13:563,48,0	0/0:14,0:12:27.09:0,27,378	0/0:16,0:16:39.09:0,39,523	0/0:16,0:9:24.08:0,24,328	1/1:2,7:8:15.05:180,15,0	0/0:15,0:10:30.10:0,30,404	0/0:14,0:13:30.10:0,30,412	1/1:3,10:11:30.09:360,30,0	0/0:12,0:10:24.08:0,24,335	1/1:4,10:12:30.09:360,30,0	0/0:11,0:11:27.09:0,27,378	0/0:6,0:5:9.03:0,9,126	0/0:27,0:25:56:0,56,759	0/1:3,20:23:23.83:581,0,24	0/0:10,0:7:18.06:0,18,249	0/0:15,0:13:36.12:0,36,498	1/1:2,18:19:39.59:468,40,0	1/1:3,19:19:54.17:647,54,0	0/0:12,0:12:24.08:0,24,335	0/0:12,0:12:24.08:0,24,336	1/1:0,14:14:33.10:394,33,0	0/0:19,0:15:42.13:0,42,562	0/0:12,0:11:27.09:0,27,370	0/0:10,0:5:12.04:0,12,168
chr10	89206435	.	AAAAAT	A	1523.79	PASS	AB=0.953;AC=13;AF=0.232;AN=56;BaseQRankSum=8.826;DP=475;FS=15.232;HRun=0;HaplotypeScore=91.5126;InbreedingCoeff=0.3192;MQ=59.45;MQ0=22;MQRankSum=-1.931;QD=8.61;ReadPosRankSum=2.687;VQSLOD=0.8023;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:29.43:29,0,362	0/0:9,0:9:22.85:0,23,292	0/0:34,0:11:27.43:0,27,337	0/1:21,0:8:1.50:2,0,45	0/1:17,2:19:9.59:249,0,10	0/0:13,0:13:24.05:0,24,420	0/0:16,0:16:35.79:0,36,488	0/0:13,0:12:9.66:0,10,240	1/1:12,0:11:6.33:105,6,0	0/0:23,0:20:47.26:0,47,620	0/0:12,0:11:4.69:0,5,339	1/1:16,3:18:32.16:359,32,0	0/0:9,0:8:21.03:0,21,424	0/1:6,0:6:22.87:40,0,23	0/0:8,0:8:17.40:0,17,214	0/0:9,0:8:18:0,18,218	0/0:36,0:34:89.75:0,90,1124	1/1:22,3:24:4.31:403,4,0	0/0:17,0:15:24.98:0,25,318	0/0:16,0:14:36.32:0,36,430	0/1:9,1:9:11.93:54,0,12	0/1:18,2:19:3.24:294,0,3	0/0:13,0:13:36.09:0,36,741	0/0:20,0:19:39.10:0,39,786	0/1:18,1:19:6.80:146,0,7	0/0:28,0:25:67.72:0,68,1149	0/0:13,0:13:12.53:0,13,293	0/0:9,0:5:11.97:0,12,203
chr10	89206436	.	AAAAT	A	2003.21	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=9.446;DP=451;FS=9.429;HRun=0;HaplotypeScore=79.1507;InbreedingCoeff=0.8277;MQ=61.03;MQ0=19;MQRankSum=-1.860;QD=14.84;ReadPosRankSum=2.771;VQSLOD=2.4890;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:4.32:4,0,222	0/0:9,0:9:22.78:0,23,226	0/0:34,0:11:27.40:0,27,313	0/0:22,0:9:1.36:0,1,74	1/1:14,3:17:30.25:303,30,0	0/0:10,0:10:24:0,24,334	0/0:15,0:15:33.78:0,34,374	0/0:12,0:11:8.23:0,8,164	1/1:9,1:9:19.46:162,19,0	0/0:23,0:20:26.49:0,26,454	0/0:11,0:10:1.62:0,2,253	1/1:13,2:14:34.15:339,34,0	0/0:12,0:11:30:0,30,410	1/1:6,0:6:11.54:96,12,0	0/0:9,0:9:16.36:0,16,172	0/0:9,0:8:17.98:0,18,178	0/0:34,0:32:71.04:0,71,734	1/1:20,4:23:50.16:502,50,0	0/0:17,0:16:26.49:0,26,248	0/0:16,0:14:31.36:0,31,283	1/1:7,1:7:6.97:88,7,0	1/1:16,1:16:39.19:393,39,0	0/0:13,0:13:35.09:0,35,573	0/0:20,0:19:36.10:0,36,598	1/1:11,3:14:32.45:313,32,0	0/0:30,0:27:44.07:0,44,825	0/0:13,0:13:22.71:0,23,206	0/0:7,0:5:10.58:0,11,147
chr10	89210912	.	GTCAC	G	1291.74	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.034;DP=741;FS=1.629;HRun=0;HaplotypeScore=118.4028;InbreedingCoeff=0.9998;MQ=80.39;MQ0=0;MQRankSum=-1.816;QD=32.29;ReadPosRankSum=2.923;VQSLOD=3.7079;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,148,3893	0/0:12,0:12:36.12:0,36,937	0/0:27,0:27:75.22:0,75,1761	0/0:26,0:25:65.27:0,65,1335	0/0:29,0:29:81.28:0,81,2126	0/0:21,0:21:60.19:0,60,1561	0/0:22,0:22:63.18:0,63,1583	0/0:40,0:40:99:0,120,2831	0/0:34,0:34:99:0,99,2518	0/0:40,0:40:99:0,108,2810	0/0:20,0:20:60.17:0,60,1469	0/0:34,0:34:99:0,99,2353	0/0:29,0:29:87.25:0,87,2115	0/0:25,0:25:69.24:0,69,1791	0/0:27,0:27:81.26:0,81,2063	0/0:16,0:16:45.15:0,45,1154	0/0:31,0:31:90.27:0,90,2255	0/0:22,0:22:60.17:0,60,1523	0/0:16,0:16:48.09:0,48,1102	0/0:23,0:23:69.22:0,69,1691	1/1:2,38:40:75.67:1387,76,0	0/0:22,0:22:63.18:0,63,1586	0/0:23,0:23:63.22:0,63,1637	0/0:20,0:20:57.20:0,57,1505	0/0:19,0:19:51.17:0,51,1278	0/0:28,0:28:84.25:0,84,2191	0/0:32,0:32:93.26:0,93,2386	0/0:13,0:13:39.13:0,39,984
chr10	89211585	.	G	GTTA	1447.55	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.059;DP=697;FS=0.000;HRun=0;HaplotypeScore=109.8909;InbreedingCoeff=0.9958;MQ=66.33;MQ0=0;MQRankSum=-3.439;QD=39.12;ReadPosRankSum=0.059;VQSLOD=4.5555;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,27:37:72.25:1542,72,0	0/0:12,0:12:36.12:0,36,579	0/0:24,0:22:60.17:0,60,912	0/0:23,0:22:51.11:0,51,783	0/0:23,0:23:57.19:0,57,916	0/0:23,0:22:63.21:0,63,1002	0/0:33,0:33:93.32:0,93,1486	0/0:43,0:43:99:0,111,1729	0/0:30,0:30:87.28:0,87,1374	0/0:23,0:23:63.21:0,63,1012	0/0:8,0:8:21.07:0,21,336	0/0:24,0:24:72.25:0,72,1154	0/0:20,0:20:60.20:0,60,964	0/0:21,0:21:60.20:0,60,958	0/0:27,0:27:75.26:0,75,1206	0/0:30,0:30:90.29:0,90,1423	0/0:30,0:30:75.19:0,75,1164	0/0:29,0:29:84.24:0,84,1294	0/0:28,0:28:66.22:0,66,1035	0/0:20,0:20:54.17:0,54,842	0/0:33,0:33:93.32:0,93,1484	0/0:27,0:27:78.27:0,78,1251	0/0:18,0:18:48.16:0,48,765	0/0:29,0:29:84.29:0,84,1347	0/0:24,0:24:63.20:0,63,989	0/0:22,0:21:57.17:0,57,891	0/0:19,0:19:42.14:0,42,661	0/0:17,0:17:45.14:0,45,699
chr10	89213241	.	G	GC	2477.33	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.432;DP=601;FS=0.466;HRun=6;HaplotypeScore=64.8667;InbreedingCoeff=0.9938;MQ=91.76;MQ0=0;MQRankSum=-3.017;QD=28.81;ReadPosRankSum=1.998;VQSLOD=4.3557;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,99,1009	1/1:0,8:8:18.06:226,18,0	0/0:23,0:23:45.03:0,45,440	0/0:25,0:25:54.11:0,54,548	0/0:20,0:20:48.10:0,48,488	0/0:15,0:15:45.10:0,45,459	0/0:30,0:30:78.17:0,78,795	0/0:19,0:19:39.08:0,39,397	0/0:20,0:20:54.12:0,54,551	1/1:2,23:25:69.19:842,69,0	1/1:0,10:10:24.08:302,24,0	0/0:22,0:22:63.14:0,63,642	0/0:23,0:23:63.08:0,63,619	0/0:21,0:21:60.13:0,60,612	1/1:1,22:23:60.19:755,60,0	0/0:18,0:18:48.09:0,48,482	1/1:1,19:20:42.13:528,42,0	0/0:24,0:24:66.15:0,66,673	0/0:17,0:17:39.08:0,39,397	0/0:16,0:16:36.04:0,36,353	0/0:59,0:59:99:0,153,1539	0/0:21,0:21:51.09:0,51,513	0/0:21,0:21:54.07:0,54,528	0/0:21,0:21:63.14:0,63,643	0/0:14,0:14:33.07:0,33,337	0/0:16,0:16:45.10:0,45,458	0/0:24,0:24:66.04:0,66,658	0/0:5,0:5:15.03:0,15,153
chr10	89213990	.	AAGACAGACAGAC	A	9600.47	PASS	AB=0.657;AC=30;AF=0.536;AN=56;BaseQRankSum=13.863;DP=760;FS=4.513;HRun=0;HaplotypeScore=285.1748;InbreedingCoeff=0.7132;MQ=68.81;MQ0=1;MQRankSum=-12.888;QD=21.57;ReadPosRankSum=0.766;VQSLOD=3.2219;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,16:40:24.08:773,24,0	0/1:5,0:18:6.26:6,0,24	0/0:32,0:25:15.05:0,15,344	0/0:33,0:29:18.80:0,19,522	1/1:9,9:18:20.95:477,21,0	0/0:28,0:30:63.22:0,63,3333	0/0:26,0:26:33.11:0,33,1821	0/0:14,0:23:2.96:0,3,20	1/1:8,22:31:51.17:1738,51,0	0/1:11,0:29:0.71:1,0,161	0/1:8,0:17:4.38:4,0,54	1/1:9,17:26:30.10:1040,30,0	0/0:24,0:25:45.15:0,45,2371	1/1:9,15:24:24.08:832,24,0	1/1:8,0:26:4.38:32,4,0	0/0:35,0:35:81.28:0,81,4316	0/1:18,0:25:1.10:1,0,38	1/1:17,9:26:9.03:312,9,0	1/1:9,0:17:0.04:318,0,0	1/1:8,0:21:21.07:567,21,0	1/1:24,18:42:12.04:306,12,0	1/1:12,12:24:14.79:520,15,0	0/0:15,0:15:30.10:0,30,1564	0/0:50,0:50:99:0,117,5913	1/1:7,19:26:36.12:1248,36,0	0/0:29,0:29:66.23:0,66,3342	1/1:14,0:32:51.18:1425,51,0	0/0:16,0:16:27.95:0,28,1433
chr10	89214266	.	ATT	A	2605.86	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.567;DP=579;FS=6.432;HRun=9;HaplotypeScore=135.9561;InbreedingCoeff=0.9817;MQ=62.06;MQ0=1;MQRankSum=0.039;QD=28.02;ReadPosRankSum=-0.956;VQSLOD=2.3305;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:26:58.79:0,59,236	0/0:17,0:17:30.10:0,30,492	0/0:13,0:10:13.85:0,14,292	0/0:10,0:10:24.08:0,24,379	0/0:15,0:16:41.63:0,42,645	0/0:20,0:20:51.17:0,51,837	0/0:14,0:15:42.14:0,42,668	1/1:6,19:25:60.15:690,60,0	0/0:17,0:18:53.67:0,54,845	0/0:24,0:24:51.14:0,51,794	0/0:24,0:24:66.23:0,66,1081	0/0:22,0:21:50.95:0,51,746	0/0:30,0:30:87.30:0,87,1422	0/0:18,0:18:54.13:0,54,830	0/0:23,0:23:69.16:0,69,1070	0/0:25,0:25:72.25:0,72,1182	0/0:21,0:21:43.58:0,44,730	0/0:17,0:15:36.08:0,36,560	1/1:3,16:20:41.84:550,42,0	1/1:1,28:29:84.18:951,84,0	0/0:1,0:4:10.49:0,10,61	0/0:25,0:25:75.17:0,75,1148	0/0:14,0:14:42.14:0,42,689	0/0:18,0:18:51.17:0,51,810	0/0:29,0:29:87.30:0,87,1425	0/0:36,0:37:89.79:0,90,1426	1/1:2,17:19:51.08:575,51,0	0/0:18,0:18:54.18:0,54,886
chr10	89214288	.	T	TGAAC	12919.61	PASS	AB=0.995;AC=25;AF=0.446;AN=56;BaseQRankSum=13.256;DP=592;FS=1.016;HRun=0;HaplotypeScore=144.6517;InbreedingCoeff=0.0466;MQ=55.12;MQ0=1;MQRankSum=-15.534;QD=30.69;ReadPosRankSum=8.113;VQSLOD=4.3995;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:63.79:701,0,64	1/1:1,11:13:30.10:797,30,0	0/0:16,0:11:24.03:0,24,333	0/0:10,0:9:14.90:0,15,191	0/1:19,0:19:99:388,0,118	0/0:20,0:20:57.10:0,57,888	0/0:19,0:19:54.07:0,54,759	0/1:23,0:22:99:183,0,279	0/1:27,0:27:99:717,0,104	1/1:7,13:21:60.09:1327,60,0	1/1:14,9:23:62.17:890,62,0	0/1:21,0:20:84.79:629,0,85	0/0:31,0:31:93.17:0,93,1462	0/1:20,0:20:12.35:680,0,12	1/1:8,17:25:74.87:1634,75,0	0/0:24,0:24:65.92:0,66,987	1/1:8,9:17:38.94:895,39,0	0/1:15,0:13:57.87:354,0,58	0/1:22,0:22:99:431,0,144	0/1:30,0:30:99:803,0,125	1/1:4,0:4:5.98:75,6,0	0/1:24,0:24:50.78:776,0,51	0/0:11,0:11:30.04:0,30,498	0/0:20,0:20:60.15:0,60,1030	0/1:26,0:26:96.80:760,0,97	0/1:38,1:39:30.36:30,0,1458	0/1:26,0:27:56.32:848,0,56	0/0:20,0:20:60.13:0,60,965
chr10	89214301	.	G	GAAT	8686.71	PASS	AB=0.778;AC=20;AF=0.357;AN=56;BaseQRankSum=16.192;DP=556;FS=5.456;HRun=0;HaplotypeScore=141.5205;InbreedingCoeff=-0.2068;MQ=64.76;MQ0=1;MQRankSum=-16.015;QD=24.20;ReadPosRankSum=6.469;VQSLOD=4.5182;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,12:24:96.18:556,0,96	0/1:16,0:16:10.16:339,0,10	0/0:14,0:13:38.15:0,38,567	0/0:15,0:15:31.68:0,32,517	0/1:13,8:21:99:330,0,152	0/0:17,0:17:51.17:0,51,877	0/0:16,0:16:48.16:0,48,828	0/1:21,1:21:99:139,0,254	0/1:12,14:26:99:678,0,120	0/1:25,0:25:82:519,0,82	0/1:15,0:15:69.38:355,0,69	0/1:6,12:17:41.32:563,0,41	0/0:27,0:27:81.28:0,81,1447	0/1:9,11:20:32.41:621,0,32	1/1:23,0:23:21.32:741,21,0	0/0:21,0:21:63.21:0,63,1085	0/1:20,0:20:99:265,0,187	0/1:9,4:12:15.94:301,0,16	0/1:12,6:18:84.78:388,0,85	1/1:7,16:23:9.61:742,10,0	0/1:2,2:4:37.54:38,0,57	0/1:12,12:24:9.30:727,0,9	0/0:11,0:11:33.10:0,33,561	0/0:23,0:23:60.21:0,60,1085	0/1:12,10:22:4.76:648,0,5	0/0:33,0:33:27.63:0,28,1473	0/1:13,12:25:44.05:735,0,44	0/0:19,0:19:57.15:0,57,993
chr10	89214302	.	G	GC	10622.81	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=8.722;DP=558;FS=2.024;HRun=6;HaplotypeScore=119.2435;InbreedingCoeff=0.9865;MQ=65.62;MQ0=1;MQRankSum=-11.390;QD=29.51;ReadPosRankSum=-0.339;VQSLOD=3.5837;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:24:63.11:751,63,0	1/1:3,13:16:30.08:361,30,0	0/0:16,0:14:30.05:0,30,300	0/0:15,0:15:41.09:0,41,387	1/1:2,11:21:54:625,54,0	0/0:17,0:17:42.09:0,42,426	0/0:16,0:16:42.09:0,42,428	1/1:4,17:21:54.16:665,54,0	1/1:3,10:26:72.21:862,72,0	1/1:5,21:26:60.19:749,60,0	1/1:3,12:15:30.10:375,30,0	1/1:3,4:17:45.14:546,45,0	0/0:27,0:27:78.16:0,78,788	1/1:0,8:19:57.18:693,57,0	1/1:5,17:22:51.16:631,51,0	0/0:21,0:21:60.13:0,60,607	1/1:2,18:20:51.16:639,51,0	1/1:3,5:11:24.08:297,24,0	1/1:3,9:18:45.14:557,45,0	1/1:2,5:23:63.06:722,63,0	1/1:0,2:4:11.97:129,12,0	1/1:4,9:25:47.79:543,48,0	0/0:11,0:11:30.05:0,30,301	0/0:23,0:23:60.09:0,60,601	1/1:5,7:22:57.07:645,57,0	0/0:31,2:33:9.27:0,9,711	1/1:1,14:27:72.07:835,72,0	0/0:19,0:19:48.11:0,48,490
chr10	89214976	.	C	CA	1146.42	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.883;DP=653;FS=5.848;HRun=0;HaplotypeScore=95.6522;InbreedingCoeff=0.9933;MQ=83.33;MQ0=0;MQRankSum=-1.655;QD=36.98;ReadPosRankSum=2.090;VQSLOD=3.5794;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1468	0/0:11,0:11:29.93:0,30,332	0/0:26,0:26:74.76:0,75,851	0/0:15,0:15:44.88:0,45,501	0/0:17,0:17:51.14:0,51,685	0/0:25,0:25:75.19:0,75,958	0/0:22,0:22:66.01:0,66,828	0/0:18,0:18:41.70:0,42,542	0/0:28,0:28:81.25:0,81,1096	0/0:30,0:30:90.14:0,90,1069	0/0:10,0:10:24.02:0,24,253	0/0:27,0:27:69.20:0,69,905	0/0:26,0:26:69.19:0,69,903	0/0:16,0:16:48.10:0,48,575	0/0:16,0:16:45.06:0,45,568	0/0:25,0:25:75.21:0,75,986	0/0:50,0:50:99:0,147,1883	0/0:26,0:26:78.16:0,78,1005	0/0:25,0:25:75.21:0,75,961	0/0:19,0:19:54.11:0,54,634	1/1:0,31:31:87.29:1241,87,0	0/0:18,0:18:54.18:0,54,752	0/0:14,0:14:42.13:0,42,560	0/0:39,0:39:99:0,117,1614	0/0:20,0:20:56.97:0,57,749	0/0:34,0:34:95.47:0,95,1198	0/0:20,0:20:60.16:0,60,784	0/0:7,0:7:21.02:0,21,239
chr10	89218669	.	A	AAAGG	9184.23	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.348;DP=547;FS=3.489;HRun=0;HaplotypeScore=127.0028;InbreedingCoeff=0.7714;MQ=60.89;MQ0=3;MQRankSum=-1.211;QD=19.97;ReadPosRankSum=0.433;VQSLOD=4.5015;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:27:7.57:67,8,0	1/1:1,0:1:3.01:43,3,0	0/0:32,0:19:5.30:0,5,94	0/0:36,0:21:15:0,15,180	1/1:5,0:17:32.99:333,33,0	1/1:8,9:17:24.08:569,24,0	1/1:12,16:30:39.13:906,39,0	1/1:36,0:36:40.51:557,41,0	1/1:14,0:22:33.09:492,33,0	1/1:9,0:11:15.04:224,15,0	1/1:13,0:14:9.03:142,9,0	1/1:10,1:18:33.08:504,33,0	1/1:8,10:19:21.07:497,21,0	1/1:14,0:19:36.07:450,36,0	1/1:19,0:25:33:426,33,0	0/0:19,0:19:27.08:0,27,400	1/1:12,0:18:9.03:132,9,0	1/1:17,0:25:15.01:187,15,0	1/1:10,0:13:12.03:172,12,0	1/1:6,0:8:14.49:137,14,0	1/1:17,0:18:17.97:206,18,0	1/1:9,0:13:29.99:383,30,0	1/1:5,7:12:18.06:425,18,0	1/1:20,10:30:42.14:993,42,0	1/1:12,0:14:9.91:136,10,0	1/1:7,7:15:27.09:575,27,0	1/1:14,0:24:24.08:416,24,0	1/1:6,6:12:9.03:214,9,0
chr10	89218717	.	GGAGAGAGAGAGAGA	G	4144.72	PASS	AB=0.801;AC=16;AF=0.308;AN=52;BaseQRankSum=5.566;DP=574;FS=3.820;HRun=0;HaplotypeScore=220.9684;InbreedingCoeff=0.7417;MQ=44.00;MQ0=27;MQRankSum=-7.797;QD=23.82;ReadPosRankSum=5.124;VQSLOD=2.2047;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:24:64.12:117,0,64	0/0:2,0:3:6:0,6,135	./.	./.	1/1:16,3:19:9.03:294,9,0	0/0:18,0:19:33.10:0,33,1540	0/0:30,0:31:39.13:0,39,1847	0/0:16,0:14:20.98:0,21,294	1/1:11,11:21:27.09:1065,27,0	0/0:14,0:16:42.14:0,42,1275	0/0:5,0:12:21.07:0,21,651	1/1:12,11:23:18.06:690,18,0	0/0:19,0:19:33.11:0,33,1710	1/1:9,12:22:25.64:931,26,0	0/0:14,0:31:39.13:0,39,1305	0/0:21,0:25:57.20:0,57,3340	0/0:15,0:17:24.08:0,24,681	1/1:8,2:10:6.02:237,6,0	0/0:9,0:10:15.01:0,15,210	0/0:9,0:17:24.03:0,24,327	0/0:25,0:24:39.13:0,39,1840	1/1:8,0:15:8.86:245,9,0	0/0:14,0:13:12.04:0,12,564	0/0:32,0:32:63.17:0,63,3141	1/1:8,10:18:15.05:516,15,0	0/0:19,0:20:57.19:0,57,2643	0/1:13,0:20:50.56:51,0,180	0/0:12,0:13:12.04:0,12,649
chr10	89219748	.	GACAA	G	1613.72	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.585;DP=737;FS=2.399;HRun=0;HaplotypeScore=118.5505;InbreedingCoeff=0.9819;MQ=81.61;MQ0=0;MQRankSum=-4.739;QD=43.61;ReadPosRankSum=1.524;VQSLOD=4.2887;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,34:37:90.31:1709,90,0	0/0:13,0:13:39.13:0,39,1049	0/0:22,0:22:63.16:0,63,1526	0/0:21,0:21:56.37:0,56,1283	0/0:19,0:19:51.13:0,51,1316	0/0:16,0:16:48.16:0,48,1277	0/0:46,0:46:99:0,132,3488	0/0:23,0:23:63.21:0,63,1619	0/0:37,0:37:99:0,105,2802	0/0:20,0:20:51.14:0,51,1317	0/0:9,0:9:24.08:0,24,644	0/0:31,0:31:90.31:0,90,2430	0/0:21,0:21:63.22:0,63,1687	0/0:26,0:26:78.27:0,78,2078	0/0:35,0:35:99:0,102,2697	0/0:24,0:24:72.24:0,72,1817	0/0:39,0:39:99:0,117,3089	0/0:27,0:27:81.28:0,81,2187	0/0:21,0:21:60.21:0,60,1583	0/0:16,0:16:45.15:0,45,1198	0/0:99,0:99:99:0,283,7433	0/0:16,0:16:45.15:0,45,1207	0/0:18,0:18:54.18:0,54,1394	0/0:44,0:44:99:0,129,3449	0/0:26,0:26:75.25:0,75,1963	0/0:16,0:16:39.61:0,40,1054	0/0:10,0:10:30.10:0,30,810	0/0:5,0:5:15.05:0,15,405
chr10	89221256	.	T	TTGCCCGGGGC	1302.45	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.765;DP=439;FS=6.679;HRun=0;HaplotypeScore=136.5742;InbreedingCoeff=0.7906;MQ=78.63;MQ0=0;MQRankSum=-5.879;QD=54.27;ReadPosRankSum=-1.353;VQSLOD=2.9045;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,4122	0/0:1,0:1:3.01:0,3,100	0/0:11,0:11:18.06:0,18,486	0/0:12,0:12:21.07:0,21,539	0/0:7,0:7:21.07:0,21,701	0/0:14,0:14:42.14:0,42,1358	0/0:25,0:25:75.24:0,75,2246	0/0:20,0:20:48.16:0,48,1463	0/0:11,0:11:33.11:0,33,1061	0/0:17,0:17:44.57:0,45,1412	0/0:8,0:8:15.05:0,15,501	0/0:22,0:22:54.19:0,54,1673	0/0:14,0:14:42.14:0,42,1349	0/0:18,0:18:54.15:0,54,1488	0/0:13,0:13:36.12:0,36,1157	0/0:10,0:10:30.09:0,30,830	0/0:47,0:47:99:0,138,4429	0/0:23,0:23:66.23:0,66,1992	0/0:16,0:16:48.16:0,48,1420	0/0:5,0:5:15.05:0,15,501	1/1:16,8:23:32.77:1397,33,0	0/0:10,0:10:24.08:0,24,758	0/0:13,0:13:39.13:0,39,1206	0/0:18,0:18:54.19:0,54,1749	0/0:9,0:9:27.09:0,27,799	0/0:14,0:14:42.14:0,42,1342	0/0:7,0:7:21.07:0,21,661	0/0:4,0:4:12.04:0,12,400
chr10	89221259	.	A	ATCCTGG	788.21	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.563;DP=426;FS=2.728;HRun=0;HaplotypeScore=98.0873;InbreedingCoeff=0.7962;MQ=77.67;MQ0=0;MQRankSum=-4.990;QD=37.53;ReadPosRankSum=-1.063;VQSLOD=3.3015;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,3249	0/0:1,0:1:3.01:0,3,77	0/0:10,0:10:23.74:0,24,435	0/0:10,0:11:21.07:0,21,452	0/0:7,0:7:21.07:0,21,538	0/0:14,0:14:42.14:0,42,1049	0/0:25,0:25:75.24:0,75,1809	0/0:17,0:17:48.16:0,48,1207	0/0:12,0:12:36.11:0,36,870	0/0:16,0:16:41.73:0,42,1075	0/0:6,0:6:15.05:0,15,384	0/0:19,0:19:57.15:0,57,1302	0/0:15,0:15:42.13:0,42,1024	0/0:18,0:18:54.19:0,54,1317	0/0:13,0:13:39.12:0,39,924	0/0:9,0:9:27.09:0,27,666	0/0:48,0:48:99:0,141,3495	0/0:23,0:23:69.18:0,69,1552	0/0:16,0:16:48.16:0,48,1171	0/0:5,0:5:15.05:0,15,384	1/1:13,8:20:33.57:883,34,0	0/0:9,0:9:27.06:0,27,587	0/0:13,0:13:39.08:0,39,885	0/0:18,0:18:54.17:0,54,1330	0/0:9,0:9:27.07:0,27,588	0/0:14,0:14:42.14:0,42,1027	0/0:8,0:8:24.07:0,24,562	0/0:4,0:4:12.04:0,12,307
chr10	89222254	.	CCCTCCCTCCT	C	1311.80	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=2.591;DP=341;FS=21.661;HRun=0;HaplotypeScore=96.3099;InbreedingCoeff=0.5851;MQ=70.57;MQ0=3;MQRankSum=-4.075;QD=21.16;ReadPosRankSum=-1.063;VQSLOD=1.0066;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:30.07:0,30,1197	0/0:3,0:3:3.01:0,3,75	0/0:9,0:7:2.99:0,3,24	0/0:7,0:5:6.02:0,6,67	./.	0/0:13,0:13:21.06:0,21,854	0/0:14,0:14:17.08:0,17,764	1/1:29,0:28:15.01:176,15,0	0/0:6,0:6:6.02:0,6,300	0/0:9,0:9:3.01:0,3,135	0/0:6,0:6:6.01:0,6,123	0/0:10,0:10:9.02:0,9,325	0/0:17,0:17:30.07:0,30,1165	0/0:12,0:12:21.07:0,21,928	0/0:6,0:6:6.02:0,6,300	0/0:8,0:8:6.02:0,6,290	0/0:14,0:14:6.02:0,6,301	0/0:22,0:22:24.08:0,24,1156	./.	1/1:10,5:15:12.04:362,12,0	0/0:17,0:16:24.04:0,24,823	0/0:10,0:10:9.03:0,9,449	0/0:12,0:12:9.01:0,9,450	0/0:13,0:13:18.04:0,18,651	0/0:11,0:11:12.02:0,12,353	0/0:13,0:13:6.02:0,6,300	1/1:7,11:18:30.10:905,30,0	0/0:7,0:7:9.03:0,9,451
chr10	89223758	.	GGAGATACGT	G	4362.12	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.796;DP=530;FS=0.000;HRun=0;HaplotypeScore=146.8040;InbreedingCoeff=0.9764;MQ=70.18;MQ0=0;MQRankSum=-11.269;QD=58.95;ReadPosRankSum=1.740;VQSLOD=4.5951;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,21:28:48.16:1454,48,0	1/1:1,5:6:9.03:273,9,0	0/0:7,0:7:15.05:0,15,700	0/0:14,0:15:36.12:0,36,1574	0/0:14,0:14:33.11:0,33,1520	0/0:18,0:18:48.16:0,48,2196	0/0:19,0:19:57.20:0,57,2653	0/0:34,0:34:87.30:0,87,3768	0/0:21,0:21:51.18:0,51,2322	0/0:14,0:14:39.13:0,39,1818	0/0:9,0:9:27.09:0,27,1207	0/0:28,0:28:81.28:0,81,3740	0/0:19,0:19:57.20:0,57,2701	0/0:14,0:14:42.14:0,42,1965	1/1:1,12:13:33.11:1000,33,0	0/0:15,0:15:45.15:0,45,2164	1/1:7,20:27:54.19:1636,54,0	0/0:33,0:33:99:0,99,4633	0/0:16,0:16:45.15:0,45,1925	0/0:14,0:14:39.13:0,39,1820	0/0:42,0:42:99:0,123,5667	0/0:16,0:16:48.15:0,48,2138	0/0:15,0:15:42.14:0,42,1983	0/0:34,0:34:93.32:0,93,4479	0/0:20,0:20:57.18:0,57,2582	0/0:19,0:19:51.18:0,51,2203	0/0:14,0:14:42.14:0,42,1799	0/0:6,0:6:18.06:0,18,844
chr10	89224249	.	A	AT	2929.19	PASS	AB=0.935;AC=19;AF=0.339;AN=56;BaseQRankSum=-9.931;DP=535;FS=1.323;HRun=10;HaplotypeScore=60.6414;InbreedingCoeff=0.7128;MQ=83.76;MQ0=4;MQRankSum=-0.815;QD=14.08;ReadPosRankSum=-0.132;VQSLOD=3.6081;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,24:34:59.78:590,60,0	1/1:2,4:6:9.02:96,9,0	0/0:27,0:24:0.84:0,1,133	0/1:26,0:18:27.76:28,0,93	0/0:19,0:19:47.59:0,48,390	0/1:21,3:23:13.10:13,0,313	0/0:25,0:25:59.89:0,60,488	1/1:5,17:22:51.12:538,51,0	0/0:14,0:14:17.85:0,18,292	0/0:15,0:15:23.94:0,24,197	0/0:9,0:9:17.96:0,18,148	0/0:17,1:20:17.02:0,17,321	0/0:13,0:13:32.96:0,33,271	0/0:12,0:13:31.98:0,32,249	1/1:1,9:10:21.05:224,21,0	0/0:10,0:10:20.96:0,21,172	1/1:5,31:36:56.56:807,57,0	0/0:16,1:17:9.95:0,10,285	1/1:2,11:13:30.05:305,30,0	1/1:4,12:16:33.93:341,34,0	0/0:30,0:29:68.89:0,69,566	0/0:21,0:22:52.93:0,53,420	0/0:25,1:26:30.91:0,31,457	0/1:9,1:11:2.99:3,0,171	0/0:20,0:20:4.20:0,4,229	0/0:28,1:29:42.88:0,43,553	1/1:4,5:9:18.03:185,18,0	0/0:16,0:17:31.99:0,32,252
chr10	89224492	.	T	TC	3230.05	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.921;DP=600;FS=0.434;HRun=3;HaplotypeScore=56.5158;InbreedingCoeff=0.9827;MQ=79.67;MQ0=0;MQRankSum=-1.674;QD=34.36;ReadPosRankSum=-2.058;VQSLOD=3.1766;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1368	0/0:3,0:3:9.03:0,9,108	0/0:17,0:17:45.61:0,46,537	0/0:15,0:15:42.08:0,42,480	0/0:11,0:11:27.07:0,27,313	0/0:23,0:23:69.17:0,69,802	0/0:35,0:35:96.28:0,96,1140	1/1:2,32:34:96.29:1294,96,0	0/0:24,0:24:69.20:0,69,817	0/0:18,0:18:42.10:0,42,483	0/0:13,0:13:36.10:0,36,421	0/0:14,0:14:39.11:0,39,457	0/0:17,0:17:48.15:0,48,576	0/0:16,0:16:45.14:0,45,540	0/0:20,0:20:54.17:0,54,648	0/0:17,0:17:48.15:0,48,576	0/0:40,0:40:99:0,114,1368	0/0:29,0:29:78.24:0,78,936	1/1:3,19:22:57.19:798,57,0	1/1:0,11:11:27.09:377,27,0	0/0:52,0:52:99:0,150,1800	0/0:12,0:12:36.11:0,36,432	0/0:10,0:10:24.07:0,24,288	0/0:22,0:22:54.16:0,54,648	0/0:14,0:14:36.11:0,36,432	0/0:31,0:31:90.27:0,90,1072	1/1:1,26:27:66.22:923,66,0	0/0:13,0:13:39.12:0,39,468
chr10	89224642	.	G	GAA	6091.12	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=4.265;DP=565;FS=0.752;HRun=11;HaplotypeScore=93.2047;InbreedingCoeff=0.9325;MQ=68.92;MQ0=0;MQRankSum=-4.899;QD=17.55;ReadPosRankSum=0.391;VQSLOD=3.9211;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,19:26:49:672,49,0	1/1:0,6:9:20.03:211,20,0	0/0:34,0:24:39.69:0,40,331	0/1:21,0:18:6.11:6,0,137	1/1:9,0:27:52.11:193,52,0	0/0:21,0:21:60.07:0,60,576	0/0:22,0:24:62.18:0,62,546	1/1:4,16:22:50.96:648,51,0	1/1:7,1:21:45.02:206,45,0	0/0:21,0:21:46.33:0,46,453	0/0:16,0:17:44.80:0,45,419	1/1:7,0:13:26.49:90,26,0	0/0:13,0:13:17.93:0,18,218	1/1:3,0:16:34.79:122,35,0	1/1:6,11:19:38.61:500,39,0	0/0:10,0:10:24:0,24,226	1/1:7,21:29:71.67:966,72,0	1/1:12,1:26:18.03:163,18,0	1/1:8,16:29:62.11:753,62,0	1/1:5,15:22:43.14:553,43,0	0/0:2,0:11:16.19:0,16,69	1/1:7,0:16:21.85:104,22,0	0/0:15,0:15:27.19:0,27,311	0/0:12,0:12:25.71:0,26,259	1/1:8,0:23:44.97:157,45,0	0/0:27,0:29:71.47:0,71,658	1/1:7,13:25:65.95:746,66,0	0/0:11,0:11:12.85:0,13,219
chr10	89224704	.	CT	C	3901.29	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=6.673;DP=540;FS=10.920;HRun=4;HaplotypeScore=75.8162;InbreedingCoeff=0.9590;MQ=78.57;MQ0=0;MQRankSum=-9.166;QD=31.72;ReadPosRankSum=1.995;VQSLOD=3.6644;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.19:0,57,796	0/0:10,0:10:27.09:0,27,377	0/0:18,0:18:54.18:0,54,755	0/0:17,0:17:1.18:0,1,412	1/1:1,30:31:81.24:959,81,0	0/0:27,0:27:78.26:0,78,1091	0/0:25,0:25:75.25:0,75,1050	0/0:35,0:35:93.23:0,93,1237	1/1:0,13:13:36.11:431,36,0	0/0:13,0:13:39.13:0,39,543	0/0:15,0:15:45.15:0,45,630	1/1:0,15:15:45.14:539,45,0	0/0:20,0:20:60.19:0,60,822	1/1:0,14:14:42.13:503,42,0	0/0:16,0:16:45.15:0,45,629	0/0:13,0:13:39.13:0,39,546	0/0:20,0:20:54.18:0,54,755	1/1:3,14:15:33.10:395,33,0	0/0:24,0:24:63.20:0,63,866	0/0:16,0:16:48.16:0,48,669	0/0:13,0:12:27.09:0,27,377	1/1:1,14:15:39.08:451,39,0	0/0:15,0:15:45.14:0,45,612	0/0:28,0:28:84.28:0,84,1170	1/1:3,15:18:54.15:624,54,0	0/0:37,0:37:99:0,108,1497	0/0:24,0:23:72.24:0,72,1006	0/0:9,0:9:27.07:0,27,360
chr10	89225378	.	A	AG	8852.75	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-6.019;DP=665;FS=1.799;HRun=4;HaplotypeScore=71.8894;InbreedingCoeff=0.9849;MQ=74.57;MQ0=0;MQRankSum=-0.589;QD=30.63;ReadPosRankSum=4.505;VQSLOD=5.2374;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,38:41:99:1353,99,0	1/1:1,13:14:30.10:406,30,0	0/0:24,0:24:52.34:0,52,552	0/0:9,0:8:6.05:0,6,112	1/1:2,20:22:51.17:686,51,0	0/0:13,0:13:39.11:0,39,441	0/0:25,0:25:59.90:0,60,660	0/0:34,0:34:93.14:0,93,998	1/1:1,12:13:30.10:410,30,0	0/0:26,0:26:78.20:0,78,858	0/0:22,0:22:63.18:0,63,713	1/1:1,22:23:54.18:738,54,0	0/0:15,0:15:45.10:0,45,497	1/1:2,24:26:51.17:697,51,0	1/1:2,20:22:26.45:593,26,0	0/0:25,0:25:72.21:0,72,816	1/1:4,41:45:85.53:1373,86,0	1/1:0,13:13:33.11:451,33,0	0/0:24,0:24:66.14:0,66,727	0/0:28,0:28:81.23:0,81,918	1/1:0,21:21:48.16:656,48,0	1/1:1,24:25:57.10:752,57,0	0/0:25,0:25:75.21:0,75,850	0/0:31,0:31:93.25:0,93,1043	1/1:1,23:24:54.18:738,54,0	0/0:38,0:38:99:0,105,1161	0/0:29,0:29:84.21:0,84,935	0/0:8,0:8:24.07:0,24,272
chr10	89226055	.	G	GA	10974.10	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-13.275;DP=569;FS=7.667;HRun=4;HaplotypeScore=54.5928;InbreedingCoeff=0.9878;MQ=71.49;MQ0=0;MQRankSum=-1.506;QD=34.95;ReadPosRankSum=0.304;VQSLOD=5.0623;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:23:54.18:739,54,0	1/1:3,8:11:21.07:287,21,0	0/0:7,0:7:17.72:0,18,175	0/0:8,0:8:18.02:0,18,180	1/1:3,13:16:39.13:534,39,0	0/0:21,0:21:60.17:0,60,681	0/0:25,0:25:63.17:0,63,714	1/1:2,17:19:51.17:697,51,0	1/1:2,27:29:41.23:951,41,0	0/0:30,0:30:75.21:0,75,851	0/0:5,0:5:9.01:0,9,93	1/1:1,24:25:66.22:903,66,0	0/0:21,0:21:60.14:0,60,668	1/1:0,23:23:57.19:780,57,0	1/1:1,15:16:42.14:575,42,0	0/0:22,0:22:60.15:0,60,670	1/1:1,33:34:93.31:1272,93,0	1/1:0,31:31:90.30:1231,90,0	1/1:4,17:22:25.74:703,26,0	1/1:1,15:16:42.10:553,42,0	0/0:45,0:45:99:0,120,1361	1/1:0,17:17:42.14:574,42,0	0/0:13,0:13:36.10:0,36,408	0/0:30,0:30:69.19:0,69,783	1/1:1,12:14:39.13:525,39,0	0/0:22,0:22:54.15:0,54,613	1/1:1,16:18:48.16:651,48,0	0/0:6,0:6:18.05:0,18,204
chr10	89226949	.	AGGTG	A	5429.95	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.496;DP=667;FS=13.357;HRun=0;HaplotypeScore=142.5883;InbreedingCoeff=0.9934;MQ=82.74;MQ0=0;MQRankSum=-14.589;QD=41.77;ReadPosRankSum=-2.408;VQSLOD=4.3344;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:56:99:0,163,4310	0/0:7,0:7:21.07:0,21,535	0/0:22,0:22:64.10:0,64,1700	0/0:21,0:21:60.21:0,60,1546	1/1:1,15:16:35.77:684,36,0	0/0:23,0:23:69.22:0,69,1784	0/0:13,0:13:39.13:0,39,1058	0/0:24,0:24:69.24:0,69,1825	1/1:2,17:19:45.15:863,45,0	0/0:26,0:26:78.27:0,78,2136	0/0:6,0:6:15.05:0,15,410	1/1:5,21:26:54.15:939,54,0	0/0:23,0:23:66.23:0,66,1805	1/1:3,23:26:57.20:1103,57,0	0/0:18,0:18:51.18:0,51,1387	0/0:21,0:21:57.20:0,57,1549	0/0:45,0:45:99:0,129,3456	1/1:2,9:11:15.05:291,15,0	0/0:23,0:23:62.65:0,63,1433	0/0:27,0:27:75.26:0,75,2003	0/0:74,0:74:99:0,214,5780	1/1:4,16:20:51.16:948,51,0	0/0:13,0:13:36.11:0,36,910	0/0:18,0:18:54.19:0,54,1479	1/1:2,10:12:33.09:602,33,0	0/0:38,0:38:99:0,114,3021	0/0:24,0:23:72.20:0,72,1871	0/0:14,0:14:39.13:0,39,1018
chr10	89226977	.	CCG	C	4584.52	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.550;DP=667;FS=9.187;HRun=0;HaplotypeScore=124.7176;InbreedingCoeff=0.9977;MQ=91.26;MQ0=0;MQRankSum=-14.969;QD=37.89;ReadPosRankSum=3.549;VQSLOD=6.8668;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,2731	0/0:7,0:7:21.06:0,21,352	0/0:31,0:31:83.29:0,83,1456	0/0:28,0:28:81.12:0,81,1511	1/1:0,16:16:21.07:339,21,0	0/0:23,0:23:69.23:0,69,1351	0/0:20,0:20:60.21:0,60,1189	0/0:18,0:18:54.08:0,54,917	1/1:0,17:17:42.14:680,42,0	0/0:20,0:20:60.20:0,60,1148	0/0:8,0:8:24.08:0,24,483	1/1:0,24:24:60.16:941,60,0	0/0:21,0:21:63.11:0,63,1177	1/1:0,23:23:60.20:971,60,0	0/0:18,0:18:54.17:0,54,1047	0/0:20,0:20:60.21:0,60,1181	0/0:48,0:48:99:0,141,2785	1/1:0,14:14:27.09:439,27,0	0/0:23,0:23:66.21:0,66,1231	0/0:28,0:28:84.26:0,84,1548	0/0:73,0:73:99:0,214,4113	1/1:0,15:15:42.14:680,42,0	0/0:13,0:13:39.11:0,39,696	0/0:23,0:23:69.22:0,69,1305	1/1:0,12:12:33.11:535,33,0	0/0:42,0:42:99:0,123,2361	0/0:27,0:27:81.27:0,81,1517	0/0:9,0:9:27.09:0,27,530
chr10	89227111	.	GCCGAGA	G	568.56	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.952;DP=584;FS=1.290;HRun=0;HaplotypeScore=172.2534;InbreedingCoeff=0.9692;MQ=73.69;MQ0=0;MQRankSum=-4.627;QD=16.72;ReadPosRankSum=-0.829;VQSLOD=2.9987;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,2880	0/0:7,0:7:21.07:0,21,577	0/0:12,0:12:33.11:0,33,1088	0/0:25,0:24:65.54:0,66,1747	0/0:20,0:20:39.12:0,39,1060	0/0:13,0:13:39.13:0,39,1413	0/0:27,0:27:78.25:0,78,2601	0/0:28,0:28:81.28:0,81,2059	0/0:26,0:26:69.24:0,69,1905	0/0:22,0:22:66.18:0,66,2328	0/0:13,0:13:39.13:0,39,1373	0/0:22,0:22:51.18:0,51,1489	0/0:23,0:23:69.24:0,69,2453	0/0:19,0:19:42.14:0,42,1146	0/0:32,0:33:87.29:0,87,2342	0/0:22,0:22:66.21:0,66,2192	0/0:27,0:27:81.28:0,81,2217	0/0:24,0:24:51.17:0,51,1444	0/0:22,0:22:63.22:0,63,1621	0/0:13,0:13:36.12:0,36,966	1/1:3,31:34:27.09:663,27,0	0/0:9,0:9:18.06:0,18,515	0/0:10,0:10:24.08:0,24,868	0/0:26,0:26:78.23:0,78,2730	0/0:8,0:8:15.05:0,15,428	0/0:21,0:21:60.21:0,60,2066	0/0:30,0:30:90.24:0,90,2432	0/0:11,0:11:33.11:0,33,1208
chr10	89227581	.	AAC	A	1212.55	PASS	AB=0.903;AC=42;AF=0.913;AN=46;BaseQRankSum=3.003;DP=508;FS=7.301;HRun=0;HaplotypeScore=94.5779;InbreedingCoeff=-0.1361;MQ=66.62;MQ0=15;MQRankSum=-0.322;QD=3.05;ReadPosRankSum=1.797;VQSLOD=0.8334;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:33:5.68:28,6,0	1/1:6,0:4:5.75:44,6,0	./.	./.	1/1:18,0:19:3.73:16,4,0	1/1:9,1:9:3.01:32,3,0	1/1:15,8:22:9.02:97,9,0	./.	1/1:7,0:11:8.52:42,9,0	0/1:18,2:19:13.42:13,0,153	0/1:12,3:14:16.32:16,0,161	1/1:11,0:14:8.52:42,9,0	1/1:7,0:7:6:52,6,0	1/1:14,0:15:2.84:14,3,0	1/1:10,4:15:11.86:111,12,0	1/1:7,5:12:15.04:161,15,0	0/1:20,1:22:21.36:127,0,21	1/1:15,0:17:9.41:44,9,0	./.	1/1:15,0:17:2.68:11,3,0	./.	1/1:17,0:20:9.31:42,9,0	1/1:13,7:20:8.91:97,9,0	1/1:22,4:26:18.35:176,18,0	1/1:18,0:20:2.84:14,3,0	0/1:19,1:19:21.29:26,0,21	1/1:7,0:11:14.20:70,14,0	1/1:12,3:16:7.09:49,7,0
chr10	89227666	.	T	TG	4287.05	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.173;DP=556;FS=4.919;HRun=3;HaplotypeScore=78.9109;InbreedingCoeff=0.9977;MQ=71.10;MQ0=0;MQRankSum=-2.015;QD=31.99;ReadPosRankSum=1.471;VQSLOD=5.2588;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.24:0,90,1044	0/0:9,0:8:24.06:0,24,278	0/0:19,0:19:29.98:0,30,354	0/0:15,0:16:19.90:0,20,183	1/1:2,17:19:36.01:461,36,0	0/0:15,0:15:45.14:0,45,537	0/0:16,0:16:39.08:0,39,441	0/0:22,0:22:63.17:0,63,734	1/1:1,20:21:57.16:726,57,0	0/0:19,0:19:54.15:0,54,631	0/0:15,0:15:45.09:0,45,513	1/1:2,14:16:36.12:486,36,0	0/0:17,0:17:51.12:0,51,581	1/1:1,18:20:45.08:671,45,0	0/0:26,0:26:72.16:0,72,812	0/0:19,0:19:57.15:0,57,660	0/0:35,0:35:99:0,99,1139	1/1:3,20:23:57.15:746,57,0	0/0:15,0:15:42.10:0,42,475	0/0:9,0:9:21.04:0,21,237	0/0:24,0:24:60.08:0,60,663	1/1:1,16:17:45.04:552,45,0	0/0:20,0:20:54.16:0,54,647	0/0:32,0:32:93.28:0,93,1105	1/1:1,17:18:48.16:644,48,0	0/0:21,0:21:54.14:0,54,620	0/0:25,0:23:72.17:0,72,826	0/0:16,0:16:48.15:0,48,575
chr10	89227846	.	CCATCA	C	5298.71	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.180;DP=620;FS=38.121;HRun=0;HaplotypeScore=126.0214;InbreedingCoeff=0.9825;MQ=93.78;MQ0=0;MQRankSum=-14.314;QD=47.31;ReadPosRankSum=1.753;VQSLOD=3.2257;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,4157	0/0:4,0:4:12.04:0,12,329	0/0:31,0:31:78.26:0,78,2290	0/0:30,0:30:81.06:0,81,2280	1/1:0,6:6:8.73:166,9,0	0/0:17,0:17:48.16:0,48,1504	0/0:34,0:34:96.31:0,96,2940	0/0:30,0:30:84.29:0,84,2561	1/1:1,18:19:48.12:975,48,0	0/0:24,0:23:66.23:0,66,2079	0/0:15,0:15:39.13:0,39,1184	1/1:2,16:18:45.15:944,45,0	0/0:12,0:12:33.08:0,33,970	1/1:1,18:19:48.16:1039,48,0	0/0:24,0:24:69.24:0,69,2167	0/0:16,0:16:42.14:0,42,1332	0/0:32,0:32:93.32:0,93,2935	1/1:2,19:21:51.17:1078,51,0	0/0:14,0:14:36.12:0,36,1063	0/0:18,0:17:42.13:0,42,1247	0/0:48,0:48:99:0,138,4235	1/1:1,15:16:33.11:631,33,0	0/0:18,0:18:54.19:0,54,1666	0/0:43,0:43:99:0,129,4033	1/1:3,10:13:24.08:465,24,0	0/0:28,0:28:84.28:0,84,2554	0/0:12,0:11:30.10:0,30,949	0/0:12,0:11:36.12:0,36,1141
chr10	89228036	.	A	ACAC	1199.15	PASS	AB=0.902;AC=11;AF=0.196;AN=56;BaseQRankSum=6.044;DP=1237;FS=11.868;HRun=0;HaplotypeScore=190.3209;InbreedingCoeff=0.3390;MQ=33.13;MQ0=175;MQRankSum=-5.492;QD=4.85;ReadPosRankSum=0.115;VQSLOD=1.7490;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:48:58.15:0,58,738	0/0:15,0:6:9.02:0,9,107	0/1:22,0:2:0:0,0,0	0/0:26,0:10:2.88:0,3,119	1/1:16,3:12:2.88:55,3,0	0/0:38,0:27:53.84:0,54,800	0/0:76,0:54:73.17:0,73,1099	0/0:79,0:40:19.99:0,20,416	0/1:41,3:25:73:184,0,73	0/0:52,0:31:40.62:0,41,855	0/0:20,0:13:8.65:0,9,113	0/1:38,2:20:99:258,0,100	0/0:29,1:25:52.05:0,52,747	1/1:28,0:18:6.24:65,6,0	0/0:48,0:35:29.69:0,30,406	0/0:38,0:33:77.38:0,77,1160	0/0:34,0:25:38.84:0,39,481	0/1:25,2:16:85.12:349,0,85	0/0:46,0:16:6.49:0,6,207	0/0:23,0:18:0.95:0,1,9	0/0:210,0:166:99:0,186,2895	1/1:25,2:18:14.74:229,15,0	0/0:24,0:19:35.67:0,36,509	0/0:68,0:56:73.32:0,73,1559	0/1:23,11:21:64.46:204,0,64	0/0:54,0:42:88.10:0,88,1239	0/0:13,0:9:9.70:0,10,104	0/0:13,0:12:26.76:0,27,369
chr10	89228049	.	C	CCA	1156.57	PASS	AB=0.951;AC=10;AF=0.192;AN=52;BaseQRankSum=2.633;DP=1242;FS=31.011;HRun=0;HaplotypeScore=184.5638;InbreedingCoeff=0.1429;MQ=30.19;MQ0=215;MQRankSum=-4.702;QD=3.38;ReadPosRankSum=-1.409;VQSLOD=1.3804;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:39,8:37:33.80:474,34,0	0/1:18,1:7:25.75:75,0,26	./.	./.	0/0:25,0:13:2.99:0,3,25	0/0:39,0:26:49.38:0,49,585	0/0:74,3:52:0.40:0,0,655	0/1:82,2:37:99:212,0,119	0/1:47,1:23:20.50:20,0,83	0/0:55,0:31:49.79:0,50,546	0/0:19,0:11:15.01:0,15,161	0/0:32,1:16:6.17:0,6,70	0/0:29,1:21:6.81:0,7,328	0/0:28,0:16:5.74:0,6,38	0/1:42,4:29:99:148,0,125	0/0:40,0:34:40.46:0,40,468	0/1:31,4:24:35.18:163,0,35	0/0:25,0:13:10.37:0,10,104	0/1:42,0:10:2.90:112,0,3	0/0:18,0:13:5.81:0,6,35	0/0:213,0:177:99:0,159,1960	0/0:24,0:14:2.84:0,3,24	0/0:23,0:16:23.98:0,24,288	0/0:73,0:60:89.65:0,90,1028	0/0:32,0:17:10.66:0,11,105	0/0:60,0:39:44.97:0,45,682	1/1:14,1:9:6.02:94,6,0	0/0:13,0:11:9.63:0,10,232
chr10	89228058	.	CACCA	C	365.84	PASS	AB=0.960;AC=10;AF=0.192;AN=52;BaseQRankSum=7.779;DP=1303;FS=4.170;HRun=0;HaplotypeScore=197.8296;InbreedingCoeff=-0.0445;MQ=29.33;MQ0=243;MQRankSum=-6.124;QD=1.32;ReadPosRankSum=-1.337;VQSLOD=1.8608;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:37:21.50:0,22,652	0/0:20,0:7:11.98:0,12,179	./.	./.	0/1:23,2:13:16.11:20,0,16	0/0:43,0:29:55.43:0,55,1347	0/0:89,0:54:67.44:0,67,1595	0/0:98,0:42:44.96:0,45,1146	0/1:44,3:22:78.36:122,0,78	0/0:62,0:35:66.41:0,66,1492	0/0:23,0:13:15.05:0,15,422	0/1:39,2:20:99:113,0,119	0/0:35,0:21:41.57:0,42,829	1/1:34,0:20:4.99:58,5,0	0/0:46,0:26:20.92:0,21,368	0/0:36,0:27:38.63:0,39,1078	0/1:30,0:19:31.36:31,0,495	0/1:25,1:16:99:107,0,136	0/0:45,0:8:18.03:0,18,241	0/0:18,0:11:5.88:0,6,50	0/0:227,11:184:99:0,222,4875	0/1:25,2:15:19.70:20,0,31	0/0:23,1:15:24.08:0,24,628	0/0:70,0:58:56.94:0,57,2408	0/1:31,1:13:24.66:25,0,270	0/0:63,0:41:75.52:0,76,1504	0/1:16,0:8:10.67:11,0,112	0/0:16,0:13:30.09:0,30,638
chr10	89228060	.	CCA	C	130.11	PASS	AB=0.978;AC=9;AF=0.173;AN=52;BaseQRankSum=7.103;DP=1298;FS=13.657;HRun=0;HaplotypeScore=187.4489;InbreedingCoeff=0.0985;MQ=29.19;MQ0=248;MQRankSum=-5.825;QD=0.58;ReadPosRankSum=-2.269;VQSLOD=1.0780;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,1:35:19.17:0,19,331	0/0:20,0:7:9.02:0,9,106	./.	./.	0/0:25,0:14:2.98:0,3,22	0/0:43,0:28:49.46:0,49,752	0/0:91,0:55:39.17:0,39,789	0/0:92,2:44:68.36:0,68,817	0/1:47,0:22:31.83:83,0,32	0/0:59,0:35:67.49:0,67,878	0/0:22,0:12:15.05:0,15,253	0/1:38,0:20:49.31:75,0,49	0/0:36,0:22:32.89:0,33,464	1/1:32,0:20:1.51:10,2,0	0/1:41,2:26:14.12:14,0,183	0/0:37,0:29:26.38:0,26,533	0/0:32,0:20:32.43:0,32,333	0/1:24,0:15:43.87:44,0,104	0/0:45,0:8:9.49:0,9,118	1/1:16,1:10:2.94:19,3,0	0/0:224,6:180:99:0,167,2556	0/0:28,0:17:3.01:0,3,37	0/0:25,0:16:24.08:0,24,391	0/0:69,0:58:44.62:0,45,1291	0/0:31,0:12:2.57:0,3,121	0/0:61,2:41:48.43:0,48,805	0/1:13,1:6:11.64:12,0,65	0/0:16,0:13:26.12:0,26,375
chr10	89228069	.	CACAT	C	320.75	PASS	AB=0.977;AC=10;AF=0.179;AN=56;BaseQRankSum=8.488;DP=1360;FS=1.325;HRun=0;HaplotypeScore=191.9620;InbreedingCoeff=0.1556;MQ=28.32;MQ0=250;MQRankSum=-7.020;QD=1.28;ReadPosRankSum=-2.130;VQSLOD=2.6477;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:32:12.25:0,12,542	0/0:22,0:8:9.03:0,9,162	0/0:30,0:2:6.02:0,6,90	0/0:41,0:1:2.92:0,3,17	0/0:26,0:14:1.82:0,2,5	0/0:37,0:27:53.44:0,53,1258	0/0:95,0:58:19.09:0,19,1440	0/0:117,0:56:50.94:0,51,1651	0/1:44,3:21:5.25:97,0,5	0/0:70,0:40:76.65:0,77,1597	0/0:21,0:13:14.92:0,15,399	0/1:36,1:20:33.31:97,0,33	0/0:36,0:21:28.48:0,28,731	1/1:38,2:24:9.30:70,9,0	0/0:45,0:25:4.28:0,4,276	0/0:40,1:31:36.98:0,37,849	0/0:33,0:21:33.07:0,33,684	0/1:22,0:14:70.87:71,0,211	0/1:38,0:5:18.76:19,0,193	1/1:19,0:11:3.37:11,3,0	0/0:231,2:179:99:0,167,4232	0/0:29,2:17:3.01:0,3,49	0/0:29,0:19:23.92:0,24,611	0/0:68,0:55:86.11:0,86,2157	0/1:32,1:18:59.82:60,0,210	0/0:68,1:43:25.20:0,25,1287	0/1:14,0:7:37.51:38,0,133	0/0:17,0:13:30.09:0,30,605
chr10	89228071	.	CAT	C	241.43	PASS	AB=0.979;AC=13;AF=0.232;AN=56;BaseQRankSum=9.426;DP=1330;FS=3.510;HRun=0;HaplotypeScore=174.8873;InbreedingCoeff=0.1258;MQ=28.21;MQ0=249;MQRankSum=-5.519;QD=0.68;ReadPosRankSum=-2.728;VQSLOD=2.1563;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:31:18.03:0,18,364	0/0:21,0:8:8.82:0,9,103	0/0:34,0:2:5.89:0,6,64	0/0:43,0:1:2.92:0,3,17	0/0:22,1:11:1.55:0,2,4	0/0:35,0:27:18.06:0,18,823	0/0:91,2:58:5.34:0,5,920	0/0:114,0:55:64.58:0,65,1190	1/1:42,2:19:2.78:99,3,0	0/0:69,0:41:66.67:0,67,1058	0/0:21,0:13:14.92:0,15,288	0/1:36,0:20:11.84:84,0,12	0/0:36,0:21:21.38:0,21,542	1/1:37,1:22:7.25:40,7,0	0/1:43,2:25:24.23:24,0,201	0/0:35,1:29:10.98:0,11,497	0/0:31,0:19:31.06:0,31,422	0/1:20,1:13:34.49:34,0,115	0/1:42,0:5:7.79:8,0,131	1/1:15,3:11:3.89:38,4,0	0/0:211,12:176:99:0,140,2937	0/0:29,1:17:3.01:0,3,48	0/0:27,0:17:23.92:0,24,440	0/0:66,3:56:85.87:0,86,1484	0/1:30,0:17:24.69:25,0,153	0/1:64,2:39:26.03:26,0,834	0/1:14,0:7:12.09:12,0,85	0/0:17,0:14:13.79:0,14,411
chr10	89228099	.	CCA	C	289.35	PASS	AB=0.974;AC=14;AF=0.269;AN=52;BaseQRankSum=5.645;DP=1473;DS;FS=59.220;HRun=0;HaplotypeScore=179.4693;InbreedingCoeff=-0.2605;MQ=25.97;MQ0=325;MQRankSum=-6.113;QD=0.49;ReadPosRankSum=-3.469;VQSLOD=-0.1584;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:28:4.73:0,5,45	0/0:20,0:6:5.95:0,6,44	./.	./.	0/0:30,0:15:3.01:0,3,38	0/0:41,0:24:36.12:0,36,538	0/0:105,0:59:41.38:0,41,1030	0/1:105,0:50:9.09:9,0,175	0/1:54,4:20:31.01:31,0,145	0/0:79,0:35:35.53:0,36,442	0/0:29,0:16:6.59:0,7,98	0/1:57,1:30:44.03:93,0,44	0/1:33,2:23:40.47:40,0,493	0/1:50,0:29:75.88:76,0,90	0/1:45,3:24:23.95:24,0,76	0/0:28,0:22:29.81:0,30,362	0/0:33,1:20:7.23:0,7,141	0/1:23,0:14:15.04:15,0,70	0/1:41,2:8:29.68:60,0,30	0/1:25,0:19:9.37:9,0,47	0/0:243,2:175:99:0,118,2079	0/1:33,1:21:7.74:8,0,19	0/1:35,0:18:15.85:16,0,195	0/0:80,0:61:82.57:0,83,1268	0/1:34,1:18:40.83:41,0,57	0/0:73,1:44:71.92:0,72,973	1/1:15,0:7:2.64:11,3,0	0/0:20,0:13:12.04:0,12,197
chr10	89228111	.	ACAC	A	511.70	PASS	AB=0.995;AC=14;AF=0.259;AN=54;BaseQRankSum=7.990;DP=1386;DS;FS=59.768;HRun=0;HaplotypeScore=176.9539;InbreedingCoeff=-0.0441;MQ=26.48;MQ0=292;MQRankSum=-7.720;QD=0.99;ReadPosRankSum=-3.619;VQSLOD=-0.3338;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:41,3:26:7.51:106,8,0	0/1:19,0:4:7.17:7,0,44	0/0:15,0:2:3.01:0,3,40	./.	0/0:27,0:14:3.01:0,3,54	0/0:37,0:21:35.92:0,36,684	0/0:104,0:57:89.30:0,89,1649	0/1:105,0:44:43.28:43,0,273	0/1:49,0:20:34.84:35,0,339	0/0:69,0:30:9.92:0,10,750	0/0:26,0:13:3.89:0,4,110	0/1:50,1:24:99:107,0,100	0/0:42,0:28:57.89:0,58,1042	0/1:47,0:26:90.75:91,0,179	0/1:52,0:28:0.98:1,0,121	0/0:31,0:18:30.89:0,31,500	0/1:36,1:21:32.63:33,0,236	0/1:26,0:14:46.25:46,0,107	0/0:41,0:7:4.51:0,5,50	0/0:22,0:16:11.60:0,12,144	0/0:235,1:174:99:0,150,3067	0/1:35,0:18:5.17:5,0,34	0/0:31,0:17:20.66:0,21,387	0/0:86,0:65:93.40:0,93,2134	0/1:37,0:20:71.30:114,0,71	0/0:65,0:39:77.44:0,77,1384	1/1:14,0:5:6.02:71,6,0	0/0:15,0:10:12.04:0,12,267
chr10	89228114	.	C	CCA	538.58	PASS	AB=0.992;AC=15;AF=0.278;AN=54;BaseQRankSum=6.959;DP=1369;DS;FS=59.650;HRun=0;HaplotypeScore=180.9262;InbreedingCoeff=-0.1863;MQ=27.25;MQ0=294;MQRankSum=-6.645;QD=0.94;ReadPosRankSum=-2.712;VQSLOD=0.4059;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:26:1.95:85,0,2	0/0:20,0:4:2.99:0,3,35	0/0:16,0:1:3.01:0,3,33	./.	0/1:26,0:13:0.11:0,0,0	0/0:38,0:23:24.06:0,24,293	0/0:103,0:58:62.94:0,63,981	0/1:100,0:44:89.95:90,0,97	0/1:49,0:19:12.46:12,0,200	0/0:74,0:34:10.02:0,10,352	0/0:30,0:14:3.01:0,3,39	0/1:41,0:16:27.43:27,0,60	0/0:43,0:29:48.17:0,48,658	0/1:44,0:25:50.28:50,0,89	0/1:51,0:25:27.79:28,0,60	0/1:32,0:19:28.68:29,0,245	0/1:33,2:19:99:141,0,156	0/1:21,0:11:48.80:71,0,49	0/1:42,0:6:18.57:72,0,19	0/0:21,1:16:9.02:0,9,104	0/0:231,0:177:99:0,137,1749	0/1:35,0:18:25.14:25,0,45	0/0:29,0:17:16.76:0,17,211	0/0:87,0:67:97.07:0,97,1287	0/1:36,0:20:8.71:9,0,34	0/0:64,1:38:1.32:0,1,605	1/1:13,0:5:5.38:44,5,0	0/0:20,0:15:12.01:0,12,139
chr10	89228155	.	ACAC	A	277.01	PASS	AB=0.955;AC=11;AF=0.212;AN=52;BaseQRankSum=7.210;DP=923;DS;FS=14.174;HRun=0;HaplotypeScore=149.0320;InbreedingCoeff=0.2565;MQ=35.22;MQ0=106;MQRankSum=-6.280;QD=1.75;ReadPosRankSum=-1.805;VQSLOD=1.7759;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:15:0.54:1,0,40	./.	0/0:42,0:2:3.01:0,3,68	0/0:42,0:3:3.01:0,3,68	1/1:11,1:7:0.89:2,1,0	0/0:19,0:16:31.05:0,31,594	0/0:69,0:47:92.16:0,92,1789	0/1:61,0:28:4.04:4,0,442	0/1:12,1:9:34.56:85,0,35	0/0:50,1:37:49.39:0,49,1956	0/0:20,0:14:11.71:0,12,223	1/1:17,5:10:8.40:141,8,0	0/0:32,0:27:68.70:0,69,1472	1/1:11,1:5:3.01:50,3,0	0/0:23,1:14:5.88:0,6,54	0/0:29,0:18:42.57:0,43,865	0/0:11,0:6:6.02:0,6,96	0/1:9,2:9:99:111,0,134	./.	0/0:11,0:7:2.42:0,2,62	0/0:188,0:163:99:0,252,5174	0/0:12,2:10:5.71:0,6,71	0/0:14,0:10:17.84:0,18,349	0/0:76,0:66:99:0,122,2667	0/0:12,0:7:2.94:0,3,68	0/0:53,0:36:92.90:0,93,1929	0/1:4,0:2:0:0,0,0	0/0:9,0:8:15.05:0,15,340
chr10	89228174	.	CAT	C	489.68	PASS	AB=0.970;AC=15;AF=0.313;AN=48;BaseQRankSum=7.594;DP=648;DS;FS=0.000;HRun=0;HaplotypeScore=124.0743;InbreedingCoeff=0.3867;MQ=41.68;MQ0=47;MQRankSum=-0.959;QD=1.97;ReadPosRankSum=-6.691;VQSLOD=-0.1741;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:8:0:1,0,0	./.	0/0:47,0:2:5.98:0,6,74	0/0:41,0:3:6.02:0,6,112	./.	0/0:12,0:12:24:0,24,443	0/0:36,0:32:74.14:0,74,1215	0/1:29,0:14:17.80:18,0,117	1/1:3,0:3:2.84:14,3,0	0/0:44,0:38:99:0,99,1660	0/0:12,0:12:18.06:0,18,344	1/1:4,0:8:10.05:42,10,0	0/0:26,0:26:70.35:0,70,1132	1/1:1,0:1:2.84:14,3,0	0/0:14,0:7:2.94:0,3,18	0/0:27,0:24:46.39:0,46,849	./.	1/1:2,0:3:1.38:21,1,0	0/1:19,0:5:5.09:5,0,29	0/1:4,0:4:0:0,0,0	0/1:143,16:148:99:499,0,286	1/1:4,0:6:1.23:6,1,0	0/0:19,0:17:23.86:0,24,422	0/0:64,0:61:99:0,119,2179	0/0:3,0:3:2.80:0,3,13	0/0:42,0:35:87.23:0,87,1596	./.	0/0:6,0:5:15.05:0,15,287
chr10	89228298	.	ACG	A	253.77	PASS	AB=0.952;AC=24;AF=0.522;AN=46;BaseQRankSum=4.612;DP=541;DS;FS=22.803;HRun=0;HaplotypeScore=90.7605;InbreedingCoeff=0.0700;MQ=33.53;MQ0=60;MQRankSum=-3.559;QD=1.17;ReadPosRankSum=-2.702;VQSLOD=-0.3781;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,1:3:0.88:2,1,0	./.	0/0:75,0:5:10.84:0,11,131	0/0:93,0:7:8.50:0,8,79	./.	0/1:13,1:10:20.63:28,0,21	0/1:45,3:38:47.36:47,0,399	0/1:3,0:2:0:0,0,0	./.	0/1:18,2:14:13.13:13,0,254	0/0:8,1:7:2.99:0,3,24	0/1:5,0:1:0:0,0,0	0/0:16,0:13:20.53:0,21,189	1/1:4,2:3:2.88:15,3,0	0/0:7,1:4:2.04:0,2,6	0/1:14,1:13:41.83:42,0,102	1/1:7,0:4:3.01:43,3,0	1/1:5,1:3:5.24:19,5,0	./.	1/1:6,1:5:0.47:1,0,0	0/0:107,1:94:51.44:0,51,640	1/1:3,1:3:0.89:2,1,0	0/1:4,0:3:0:0,0,0	0/1:43,1:37:2.32:2,0,240	1/1:5,2:3:3.89:31,4,0	0/1:11,3:14:99:117,0,169	./.	0/1:3,0:3:14.91:15,0,21
chr10	89228312	.	CCA	C	79.89	PASS	AB=0.889;AC=5;AF=0.109;AN=46;BaseQRankSum=0.725;DP=608;DS;FS=3.640;HRun=0;HaplotypeScore=96.6894;InbreedingCoeff=0.2174;MQ=27.43;MQ0=72;MQRankSum=-1.555;QD=0.75;ReadPosRankSum=-0.809;VQSLOD=1.6709;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:5:2.37:0,2,8	0/0:3,0:2:3:0,3,29	./.	0/0:81,0:6:3.01:0,3,44	./.	0/0:22,0:15:20.28:0,20,241	0/0:58,0:42:53.99:0,54,742	./.	0/0:9,0:5:3.01:0,3,32	0/0:29,0:23:27.54:0,28,381	0/0:11,0:10:3.01:0,3,51	0/0:8,0:3:2.68:0,3,11	0/0:24,0:22:39.44:0,39,534	1/1:6,0:3:2.88:15,3,0	0/0:14,0:7:3:0,3,25	0/0:18,0:15:18.05:0,18,251	0/0:11,0:4:5.56:0,6,30	0/0:8,0:4:8.69:0,9,87	./.	0/0:11,0:9:10.23:0,10,70	0/1:77,11:74:33.40:129,0,33	./.	0/0:13,0:11:8.73:0,9,119	0/0:43,0:38:35.03:0,35,632	1/1:9,0:8:1.71:32,2,0	0/0:20,0:19:38.24:0,38,419	0/0:2,0:1:3.01:0,3,35	0/0:3,0:3:2.22:0,2,7
chr10	89228336	.	C	CAA	301.61	PASS	AB=0.964;AC=14;AF=0.304;AN=46;BaseQRankSum=5.801;DP=621;DS;FS=33.477;HRun=0;HaplotypeScore=111.0691;InbreedingCoeff=0.2757;MQ=32.86;MQ0=75;MQRankSum=-4.684;QD=2.56;ReadPosRankSum=-0.847;VQSLOD=0.7663;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:7:4.19:31,4,0	0/1:6,1:6:5.17:66,0,5	0/0:70,0:4:11.97:0,12,122	0/0:70,0:5:10.81:0,11,83	./.	0/0:29,0:20:17.26:0,17,263	0/0:62,0:48:40.13:0,40,685	./.	0/1:11,0:6:6.45:6,0,28	0/0:30,0:19:30.49:0,30,350	0/0:17,0:15:9.33:0,9,94	./.	0/1:27,0:24:5.91:6,0,373	0/1:4,0:2:5.44:15,0,5	0/1:15,0:6:31.98:33,0,32	0/0:19,0:16:11.31:0,11,140	0/1:11,0:4:10.29:10,0,12	1/1:4,0:4:0:23,0,0	./.	1/1:10,3:11:23.85:238,24,0	0/0:59,0:52:15.57:0,16,117	1/1:10,0:5:2.80:13,3,0	0/0:20,0:18:15.43:0,15,184	0/0:42,0:36:41.68:0,42,586	0/0:10,0:8:2.51:0,3,17	0/0:32,0:23:26.57:0,27,325	./.	0/0:5,0:5:8.86:0,9,62
chr10	89228365	.	CAT	C	63.36	PASS	AB=0.976;AC=13;AF=0.271;AN=48;BaseQRankSum=6.509;DP=692;FS=17.856;HRun=0;HaplotypeScore=100.5501;InbreedingCoeff=0.0088;MQ=29.90;MQ0=115;MQRankSum=-3.417;QD=0.17;ReadPosRankSum=-4.132;VQSLOD=-0.4254;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:4:6.02:0,6,115	0/0:6,0:4:5.05:0,5,45	1/1:69,0:1:2.74:12,3,0	0/1:87,0:7:7.20:7,0,101	./.	0/0:27,0:18:21.13:0,21,494	0/0:51,1:42:64.69:0,65,1218	0/0:22,0:8:3.01:0,3,40	0/0:12,0:9:3.01:0,3,58	0/1:46,0:30:13.48:13,0,723	0/0:24,0:19:6:0,6,116	./.	0/0:29,0:22:25.76:0,26,690	0/1:4,0:3:13.41:13,0,50	0/1:14,0:8:20.04:20,0,42	0/0:17,1:15:30.08:0,30,466	1/1:10,0:3:2.68:11,3,0	0/0:5,0:2:2.22:0,2,7	0/0:21,0:3:3.01:0,3,44	1/1:14,0:10:4.82:14,5,0	0/1:63,8:56:41.64:79,0,42	./.	0/0:30,0:22:18.53:0,19,344	0/0:35,0:28:32.81:0,33,618	0/0:10,1:3:2.97:0,3,36	0/1:37,0:20:8.21:8,0,519	./.	0/1:15,0:13:15.58:16,0,289
chr10	89228366	.	ATAC	A	67.39	PASS	AB=0.977;AC=10;AF=0.208;AN=48;BaseQRankSum=5.944;DP=676;FS=26.048;HRun=0;HaplotypeScore=100.6177;InbreedingCoeff=-0.1722;MQ=30.00;MQ0=113;MQRankSum=-4.046;QD=0.25;ReadPosRankSum=-3.849;VQSLOD=-0.5518;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:4:6.02:0,6,147	0/0:6,0:4:5.42:0,5,52	0/0:66,0:1:2.68:0,3,11	0/1:84,1:7:7.02:7,0,152	./.	0/1:26,1:18:16.32:16,0,597	0/0:50,2:42:34.88:0,35,1474	0/0:22,0:8:3.01:0,3,70	0/0:11,1:9:2.90:0,3,74	0/0:45,1:29:4.10:0,4,944	0/0:22,1:18:6.42:0,6,139	./.	0/0:29,0:22:42.44:0,42,896	0/1:4,0:3:7.93:8,0,67	0/1:13,1:8:4.66:5,0,18	0/0:19,0:15:30.04:0,30,546	1/1:10,0:3:3.01:45,3,0	0/0:5,0:2:3.01:0,3,34	0/0:21,0:3:3.01:0,3,57	0/1:12,0:8:29.41:29,0,32	0/1:65,3:55:13.56:14,0,91	./.	0/0:30,0:22:11.14:0,11,409	0/0:32,0:25:33.45:0,33,739	0/0:11,0:3:2.74:0,3,14	0/1:38,0:20:51.73:52,0,716	./.	0/1:15,0:13:13.33:13,0,400
chr10	89228375	.	ACACAC	A	364.13	PASS	AB=0.985;AC=15;AF=0.341;AN=44;BaseQRankSum=6.783;DP=724;FS=17.472;HRun=0;HaplotypeScore=110.7220;InbreedingCoeff=-0.0192;MQ=27.55;MQ0=106;MQRankSum=-2.912;QD=1.28;ReadPosRankSum=0.153;VQSLOD=1.0830;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:5:6.02:0,6,104	1/1:7,0:4:0.47:1,0,0	0/0:58,0:2:2.97:0,3,92	0/0:84,0:5:14.87:0,15,215	./.	0/0:29,0:19:31.29:0,31,647	0/1:54,0:44:24.34:24,0,1400	0/0:23,0:8:3.01:0,3,44	0/0:12,0:9:3.01:0,3,52	0/1:58,2:38:99:122,0,1456	0/0:18,2:16:7.94:0,8,105	./.	0/0:31,1:23:37.61:0,38,914	0/1:6,0:3:17.81:18,0,46	1/1:13,0:6:3.85:29,4,0	0/0:22,0:18:28.85:0,29,821	1/1:10,0:3:2.98:21,3,0	./.	1/1:22,0:6:0.47:1,0,0	0/1:15,0:9:27.88:28,0,103	0/0:79,0:63:12.41:0,12,325	./.	0/1:30,1:21:28.47:28,0,296	0/0:32,0:26:26.51:0,27,625	./.	0/1:47,2:26:99:127,0,993	./.	0/1:17,0:14:92.40:92,0,386
chr10	89228386	.	ACAC	A	264.14	PASS	AB=0.969;AC=14;AF=0.368;AN=38;BaseQRankSum=5.267;DP=647;FS=11.691;HRun=0;HaplotypeScore=98.2489;InbreedingCoeff=0.0423;MQ=35.62;MQ0=90;MQRankSum=-4.688;QD=0.92;ReadPosRankSum=-0.057;VQSLOD=1.1311;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:55,0:6:3.29:3,0,125	0/0:80,0:10:12.35:0,12,175	./.	0/0:26,0:18:26.89:0,27,268	0/0:45,0:36:13.97:0,14,790	./.	0/1:9,0:8:0:0,0,0	0/1:58,1:35:61.36:61,0,1006	0/0:20,1:16:8.20:0,8,82	./.	0/0:30,0:22:30.62:0,31,600	0/0:6,0:3:0.89:0,1,2	1/1:12,0:6:4.45:49,4,0	0/0:18,0:15:9.31:0,9,509	1/1:7,1:2:3.01:39,3,0	./.	1/1:20,1:5:0.47:1,0,0	0/1:11,0:5:8.71:9,0,21	0/0:69,0:57:9.33:0,9,211	./.	0/1:26,3:20:14.86:15,0,164	0/1:27,0:22:1.63:2,0,381	./.	0/1:41,1:25:85.88:86,0,775	./.	0/1:13,2:12:99:114,0,223
chr10	89228389	.	C	CT	283.19	PASS	AB=0.954;AC=9;AF=0.265;AN=34;BaseQRankSum=4.276;DP=615;FS=15.574;HRun=0;HaplotypeScore=91.3167;InbreedingCoeff=-0.1084;MQ=36.08;MQ0=86;MQRankSum=-4.143;QD=1.29;ReadPosRankSum=0.062;VQSLOD=0.7944;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:54,0:6:33.41:33,0,103	0/0:75,0:11:17.80:0,18,190	./.	0/0:23,0:16:26.95:0,27,281	0/0:40,1:34:13.63:0,14,606	./.	0/1:9,0:8:0:0,0,0	0/1:52,8:36:99:132,0,732	0/0:17,2:15:8.19:0,8,55	./.	0/0:28,1:21:30.47:0,30,459	./.	0/1:10,0:6:14.37:14,0,26	0/0:16,0:14:29.63:0,30,355	1/1:7,0:2:2.94:18,3,0	./.	./.	0/0:10,0:5:1.96:0,2,34	0/0:65,0:56:1.52:0,2,222	./.	0/1:24,1:18:19.19:19,0,113	0/0:26,1:22:13.40:0,13,261	./.	0/1:33,5:25:99:143,0,529	./.	0/1:15,0:12:33.59:34,0,147
chr10	89228413	.	C	CACT	717.59	PASS	AB=0.925;AC=11;AF=0.393;AN=28;BaseQRankSum=1.703;DP=278;FS=31.480;HRun=0;HaplotypeScore=63.0633;InbreedingCoeff=-0.3968;MQ=57.43;MQ0=20;MQRankSum=-3.872;QD=4.69;ReadPosRankSum=0.298;VQSLOD=0.3370;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:37,0:8:20.18:0,20,284	0/0:41,0:12:10.42:0,10,202	./.	0/1:12,1:11:80.74:81,0,81	0/1:22,0:20:30.34:30,0,241	./.	0/1:4,0:5:5.32:14,0,5	0/1:22,2:16:99:285,0,279	./.	./.	0/1:10,3:9:49.29:49,0,73	./.	0/0:1,0:1:0:0,0,0	0/1:10,0:9:7.49:7,0,48	./.	./.	./.	./.	0/1:25,0:22:11.11:14,0,11	./.	1/1:13,0:10:2.90:53,3,0	0/0:10,0:8:2.60:0,3,55	./.	0/1:19,3:14:99:252,0,233	./.	0/1:5,0:5:21.52:35,0,22
chr10	89228421	.	ACT	A	132.90	PASS	AB=0.888;AC=9;AF=0.321;AN=28;BaseQRankSum=0.680;DP=187;FS=14.281;HRun=0;HaplotypeScore=48.3643;InbreedingCoeff=0.1552;MQ=60.02;MQ0=13;MQRankSum=-2.062;QD=3.16;ReadPosRankSum=2.578;VQSLOD=0.3140;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:27,0:7:13.28:0,13,175	0/0:28,0:10:11.39:0,11,132	./.	0/0:8,4:9:1.65:0,2,26	0/0:16,0:14:1.97:0,2,21	./.	0/1:3,0:3:1.01:1,0,14	0/1:10,3:9:18.86:19,0,104	./.	./.	0/0:9,2:7:0.07:0,0,5	./.	1/1:1,0:1:2.50:9,2,0	1/1:3,1:4:3.01:35,3,0	./.	./.	./.	./.	0/0:13,0:13:1.25:0,1,3	./.	0/0:5,3:6:1.25:0,1,3	0/0:8,1:7:2.50:0,2,9	./.	0/1:14,3:13:46.41:76,0,46	./.	1/1:2,2:4:7.27:90,7,0
chr10	89230486	.	A	ACG	20838.71	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-17.294;DP=745;FS=3.231;HRun=0;HaplotypeScore=84.4238;InbreedingCoeff=0.9953;MQ=76.67;MQ0=3;MQRankSum=-2.467;QD=48.02;ReadPosRankSum=2.707;VQSLOD=6.2780;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,53:53:99:2479,129,0	1/1:1,9:10:30.10:556,30,0	0/0:24,0:22:16.09:0,16,456	0/0:19,0:20:14.38:0,14,372	1/1:1,26:27:72.25:1388,72,0	0/0:16,0:16:48.16:0,48,735	0/0:30,0:30:84.29:0,84,1281	1/1:7,22:28:72.16:1157,72,0	1/1:1,22:23:66.23:1271,66,0	0/0:27,0:27:75.25:0,75,1124	0/0:9,0:9:27.09:0,27,413	1/1:0,31:30:78.27:1503,78,0	0/0:23,0:23:63.21:0,63,963	1/1:1,36:38:93.32:1793,93,0	1/1:1,33:34:84.28:1619,84,0	0/0:18,0:18:51.17:0,51,776	1/1:2,37:39:99:1968,102,0	1/1:2,45:48:99:2490,129,0	1/1:3,17:21:60.18:1029,60,0	1/1:2,15:17:39.13:752,39,0	0/0:53,0:53:99:0,154,2310	1/1:0,14:16:30.10:579,30,0	0/0:11,0:11:33.11:0,33,491	0/0:40,0:40:99:0,117,1689	1/1:1,23:24:54.18:1042,54,0	0/0:31,0:31:90.25:0,90,1328	1/1:1,22:23:63.22:1212,63,0	0/0:9,0:9:27.07:0,27,389
chr10	89230682	.	CGGGGG	C	2769.58	PASS	AB=0.929;AC=16;AF=0.296;AN=54;BaseQRankSum=3.699;DP=341;FS=35.687;HRun=12;HaplotypeScore=72.7930;InbreedingCoeff=0.7411;MQ=76.71;MQ0=0;MQRankSum=-6.231;QD=23.47;ReadPosRankSum=7.256;VQSLOD=-0.6013;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:19:12.50:0,12,183	0/0:3,0:3:6.02:0,6,168	0/0:16,0:15:26.99:0,27,442	0/0:12,0:13:30.07:0,30,526	1/1:3,8:11:12.02:211,12,0	0/0:2,0:7:12.04:0,12,168	0/0:17,0:19:25.01:0,25,442	0/0:6,0:8:9.03:0,9,134	1/1:2,15:17:39.12:661,39,0	0/0:10,0:11:3.48:0,3,90	0/0:6,0:6:3.01:0,3,88	1/1:2,21:23:56.19:1004,56,0	0/0:7,0:7:12.03:0,12,279	1/1:5,11:16:24.03:423,24,0	0/0:10,0:10:15.05:0,15,301	0/1:15,1:18:19.80:20,0,532	0/0:22,0:24:44.58:0,45,810	1/1:2,10:12:18.06:317,18,0	0/0:7,0:11:15.05:0,15,263	0/0:5,0:8:9.03:0,9,136	0/0:11,0:13:15.05:0,15,290	1/1:0,3:3:6.02:106,6,0	0/1:8,0:8:0.01:0,0,0	0/0:10,0:12:27.56:0,28,587	1/1:3,7:10:12:211,12,0	0/0:11,0:17:20.81:0,21,342	0/0:9,0:14:30.06:0,30,521	./.
chr10	89230981	.	T	TGGCC	8317.75	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-10.935;DP=554;FS=5.673;HRun=0;HaplotypeScore=98.0060;InbreedingCoeff=0.9813;MQ=86.68;MQ0=0;MQRankSum=-4.665;QD=53.66;ReadPosRankSum=2.337;VQSLOD=6.2340;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:57.18:0,57,1016	0/0:5,0:5:12.04:0,12,216	0/0:16,0:16:42.05:0,42,638	0/0:23,0:23:60.19:0,60,1027	1/1:3,10:16:17.58:390,18,0	0/0:13,0:13:36.12:0,36,662	0/0:24,0:24:69.19:0,69,1235	0/0:20,0:20:54.18:0,54,964	1/1:3,11:14:33.11:847,33,0	0/0:20,0:20:51.17:0,51,937	0/0:11,0:11:24.08:0,24,434	1/1:4,26:31:72.25:1848,72,0	0/0:18,0:18:51.17:0,51,939	1/1:6,19:26:48.16:1220,48,0	0/0:11,0:11:30.10:0,30,552	0/0:21,0:21:60.21:0,60,1104	0/0:25,0:25:60.21:0,60,1104	1/1:4,30:34:87.30:2250,87,0	0/0:19,0:19:51.15:0,51,893	0/0:13,0:13:36.09:0,36,600	0/0:43,0:43:99:0,123,2206	1/1:0,12:12:33.11:801,33,0	0/0:8,0:8:24.05:0,24,375	0/0:31,0:31:84.27:0,84,1514	1/1:8,12:22:38.47:962,38,0	0/0:22,0:22:41.60:0,42,677	0/0:25,0:25:72.25:0,72,1316	0/0:5,0:5:9:0,9,132
chr10	89232646	.	T	TTTTTC	1187.60	PASS	AB=0.955;AC=13;AF=0.232;AN=56;BaseQRankSum=0.153;DP=404;FS=6.021;HRun=0;HaplotypeScore=80.1858;InbreedingCoeff=0.1434;MQ=42.73;MQ0=53;MQRankSum=1.330;QD=6.99;ReadPosRankSum=1.397;VQSLOD=1.1270;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:26:3.15:102,3,0	1/1:3,0:2:2.92:17,3,0	0/0:25,0:6:5.83:0,6,52	0/0:15,0:9:11.65:0,12,84	0/0:19,0:12:10.06:0,10,90	0/0:12,0:10:26.99:0,27,280	0/0:20,0:13:13.47:0,13,136	0/1:30,0:28:16.37:187,0,16	0/1:5,0:4:17.02:29,0,17	0/0:16,0:11:19.56:0,20,144	0/0:20,0:15:32.23:0,32,236	1/1:4,0:4:4.24:27,4,0	0/0:6,0:6:9.95:0,10,63	0/0:6,0:5:12.22:0,12,73	0/1:13,0:13:9.59:67,0,10	0/0:9,0:8:8.81:0,9,84	0/1:28,0:18:6.79:116,0,7	0/0:10,0:7:8.02:0,8,69	0/1:14,11:21:7.30:451,0,7	0/1:16,0:14:11.47:224,0,11	0/0:6,0:6:3.45:0,3,22	0/0:3,0:2:2.63:0,3,22	0/0:16,0:15:15.39:0,15,131	0/0:12,0:8:7.32:0,7,156	0/0:9,0:8:1.36:0,1,2	0/0:17,0:15:34.02:0,34,283	0/1:16,0:16:72.12:114,0,72	0/0:13,0:9:9.14:0,9,66
chr10	89232766	.	T	TC	1540.85	PASS	AB=0.675;AC=12;AF=0.214;AN=56;BaseQRankSum=4.574;DP=448;FS=6.348;HRun=1;HaplotypeScore=59.2360;InbreedingCoeff=0.7481;MQ=40.22;MQ0=66;MQRankSum=0.416;QD=17.92;ReadPosRankSum=4.849;VQSLOD=3.9608;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:16:39.13:0,39,504	0/0:5,0:4:9.03:0,9,114	0/0:21,0:9:27.08:0,27,331	0/0:18,0:5:11.80:0,12,131	1/1:3,8:8:21.07:314,21,0	0/0:13,0:12:33.09:0,33,414	0/0:20,0:17:51.09:0,51,621	0/0:15,0:10:30.10:0,30,389	1/1:3,9:10:21.07:313,21,0	0/0:28,0:27:75.24:0,75,961	0/0:16,0:16:36.12:0,36,466	0/1:7,6:6:29.68:81,0,30	0/0:10,0:8:18.06:0,18,233	1/1:4,15:16:33.11:491,33,0	0/0:15,0:14:39.13:0,39,504	0/0:13,0:10:26.97:0,27,308	0/0:37,0:28:51.17:0,51,661	0/1:5,5:9:40.65:161,0,41	0/0:23,0:14:39.13:0,39,505	0/0:12,0:9:24.08:0,24,311	0/0:20,0:18:54.16:0,54,685	1/1:4,7:8:9.03:135,9,0	0/0:17,0:16:39.01:0,39,464	0/0:17,0:14:39.13:0,39,505	1/1:1,9:8:15.05:223,15,0	0/0:15,0:14:42.14:0,42,545	0/0:20,0:20:51.16:0,51,656	0/0:5,0:5:15.05:0,15,195
chr10	89233214	.	C	CATAG	1221.62	PASS	AB=0.844;AC=10;AF=0.333;AN=30;BaseQRankSum=-2.111;DP=345;FS=6.474;HRun=0;HaplotypeScore=37.9809;InbreedingCoeff=0.4508;MQ=24.86;MQ0=209;MQRankSum=0.591;QD=11.63;ReadPosRankSum=-2.847;VQSLOD=0.5782;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:8:9.03:0,9,110	1/1:6,0:2:3.01:39,3,0	./.	./.	./.	./.	./.	./.	./.	0/0:24,0:14:35.91:0,36,381	0/0:8,0:4:6.02:0,6,80	./.	0/0:13,0:7:6.02:0,6,84	./.	0/1:18,0:13:17.86:308,0,18	1/1:12,13:14:9.03:173,9,0	0/0:13,0:7:5.93:0,6,40	./.	0/0:19,0:5:12.04:0,12,179	0/0:7,0:3:5.98:0,6,65	1/1:12,13:20:12.04:274,12,0	./.	./.	0/0:18,0:13:23.99:0,24,284	./.	0/1:12,10:13:8.86:479,0,9	0/0:16,0:5:15.05:0,15,201	1/1:3,4:4:3.01:69,3,0
chr10	89233264	.	T	TAGAC	943.19	PASS	AB=0.929;AC=7;AF=0.233;AN=30;BaseQRankSum=2.744;DP=320;FS=6.307;HRun=0;HaplotypeScore=42.3498;InbreedingCoeff=0.1024;MQ=26.52;MQ0=170;MQRankSum=1.107;QD=8.20;ReadPosRankSum=2.417;VQSLOD=0.8720;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:10:8.81:0,9,54	1/1:4,0:2:3.01:58,3,0	./.	./.	./.	./.	./.	./.	./.	0/0:22,0:15:45.06:0,45,672	0/0:13,0:6:6.02:0,6,108	./.	0/0:9,0:8:11.93:0,12,148	./.	0/1:10,12:13:0.14:450,0,0	0/1:28,0:15:5.96:104,0,6	0/0:15,0:7:6.02:0,6,79	./.	0/0:11,0:6:15.02:0,15,151	0/0:9,0:2:6.02:0,6,71	0/1:23,0:20:9.95:168,0,10	./.	./.	0/0:16,0:13:32.99:0,33,475	./.	0/1:28,0:15:99:234,0,102	0/0:12,0:8:15:0,15,170	0/1:10,0:6:35.97:36,0,36
chr10	89234639	.	ACG	A	97.45	PASS	AB=0.879;AC=13;AF=0.342;AN=38;BaseQRankSum=3.304;DP=266;FS=0.000;HRun=0;HaplotypeScore=36.0731;InbreedingCoeff=0.3637;MQ=21.18;MQ0=153;MQRankSum=-0.091;QD=1.57;ReadPosRankSum=-0.317;VQSLOD=0.8884;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:3,1:10:2.92:17,3,0	./.	0/0:12,7:7:2.24:0,2,17	0/0:9,0:6:14.62:0,15,93	./.	0/0:9,0:4:11.61:0,12,114	./.	1/1:3,1:3:3:27,3,0	0/0:13,0:6:6.02:0,6,110	1/1:3,1:3:3:28,3,0	0/0:8,1:3:0:0,0,0	0/0:7,0:1:3.01:0,3,55	./.	0/1:3,4:5:4.69:96,0,5	0/0:6,0:5:1.24:0,1,4	1/1:7,0:3:2.97:20,3,0	0/1:11,0:1:0:0,0,0	0/0:2,0:2:2.90:0,3,16	0/1:12,0:5:0:0,0,0	0/0:22,0:3:3.01:0,3,56	1/1:5,1:4:2.94:18,3,0	./.	0/0:9,0:5:5.99:0,6,50	0/0:13,0:3:6.02:0,6,113
chr10	89234640	.	C	CAT	131.07	PASS	AB=0.814;AC=11;AF=0.324;AN=34;BaseQRankSum=-1.383;DP=264;FS=0.000;HRun=0;HaplotypeScore=36.4638;InbreedingCoeff=0.2754;MQ=21.26;MQ0=151;MQRankSum=0.929;QD=2.02;ReadPosRankSum=-1.879;VQSLOD=1.0865;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/0:11,0:10:2.44:0,2,15	./.	1/1:19,0:7:3.95:31,4,0	0/1:6,3:6:4.18:52,0,4	./.	0/0:9,0:4:11.93:0,12,127	./.	0/0:4,0:3:2.50:0,2,9	0/0:13,0:6:6.02:0,6,94	0/0:4,0:3:2.50:0,2,9	0/1:5,4:3:0:0,0,0	0/0:8,0:2:3.01:0,3,47	./.	0/1:7,0:5:17.19:17,0,34	1/1:5,0:4:5.92:39,6,0	1/1:7,0:3:2.97:20,3,0	./.	0/0:2,0:2:3:0,3,29	./.	0/0:22,0:3:3.01:0,3,47	0/0:6,0:4:2.92:0,3,17	./.	1/1:4,2:5:6.02:82,6,0	0/0:14,0:4:6.02:0,6,95
chr10	89234643	.	ACGCACGCACG	A	378.62	PASS	AC=16;AF=0.444;AN=36;BaseQRankSum=3.937;DP=271;FS=0.000;HRun=0;HaplotypeScore=42.7161;InbreedingCoeff=0.4901;MQ=21.41;MQ0=153;MQRankSum=-1.547;QD=6.64;ReadPosRankSum=0.803;VQSLOD=0.8455;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:9,1:10:3.01:53,3,0	./.	0/0:19,0:7:2.10:0,2,104	0/0:10,0:7:20.99:0,21,379	./.	0/0:11,0:4:12.04:0,12,341	./.	1/1:4,1:4:3.01:83,3,0	0/0:13,0:6:6.02:0,6,316	1/1:3,1:3:3.01:83,3,0	0/0:10,0:3:0:0,0,0	0/0:9,0:3:6.02:0,6,209	./.	1/1:5,1:5:14.83:206,15,0	0/0:5,0:4:6.02:0,6,88	./.	1/1:13,0:1:0.47:1,0,0	1/1:2,0:2:2.90:16,3,0	1/1:11,0:6:0.47:1,0,0	0/0:22,0:3:3.01:0,3,160	1/1:5,1:4:3.01:54,3,0	./.	0/0:10,0:6:6.02:0,6,282	0/0:14,0:4:6.02:0,6,292
chr10	89235067	.	CTTTTTTTCTTT	C	6130.19	PASS	AB=0.615;AC=29;AF=0.518;AN=56;BaseQRankSum=10.007;DP=399;FS=15.698;HRun=0;HaplotypeScore=122.5890;InbreedingCoeff=0.8400;MQ=57.54;MQ0=7;MQRankSum=-6.913;QD=27.61;ReadPosRankSum=2.437;VQSLOD=2.7632;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:27:42.14:1290,42,0	1/1:2,8:10:15:413,15,0	0/0:27,0:11:22.14:0,22,439	0/0:13,0:7:6.69:0,7,153	1/1:1,0:16:25.50:354,26,0	0/0:18,0:18:48.13:0,48,1699	0/0:10,0:10:24.06:0,24,751	1/1:13,1:23:30.06:708,30,0	1/1:3,1:14:20.65:404,21,0	0/0:17,0:17:45.14:0,45,1788	0/0:17,0:17:45.15:0,45,1844	1/1:2,0:9:18.06:252,18,0	0/0:8,0:7:21.06:0,21,617	1/1:1,0:7:6.02:88,6,0	1/1:3,15:18:11.93:299,12,0	0/0:6,0:6:18.06:0,18,565	1/1:3,25:30:33.07:932,33,0	0/1:6,0:16:21.63:198,0,22	1/1:12,0:15:22.44:294,22,0	1/1:8,2:12:30.01:535,30,0	0/0:5,0:4:9.03:0,9,219	1/1:2,0:6:14.54:212,15,0	0/0:8,0:7:15.04:0,15,656	0/0:11,0:11:27.05:0,27,854	1/1:4,0:9:3.01:44,3,0	0/0:23,0:23:63.19:0,63,2491	1/1:4,0:5:6.02:106,6,0	0/0:14,0:14:39.12:0,39,1616
chr10	89235244	.	T	TG	2819.87	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-7.606;DP=469;FS=0.936;HRun=8;HaplotypeScore=46.7628;InbreedingCoeff=0.9656;MQ=65.19;MQ0=0;MQRankSum=0.208;QD=24.10;ReadPosRankSum=2.824;VQSLOD=4.1957;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,2:40:61.41:0,61,811	0/0:8,0:8:18.01:0,18,165	0/0:13,0:7:8.61:0,9,56	0/0:7,0:6:8.65:0,9,59	1/1:5,19:24:29.84:595,30,0	0/0:22,0:22:54.01:0,54,488	0/0:13,0:13:33.02:0,33,302	0/0:27,0:27:60:0,60,545	1/1:3,12:15:27.08:311,27,0	0/0:13,0:13:39.01:0,39,353	0/0:15,0:15:42.02:0,42,384	1/1:2,18:20:51.15:588,51,0	0/0:8,0:8:24.01:0,24,220	1/1:0,12:12:30.09:346,30,0	0/0:19,0:19:48:0,48,435	0/0:9,0:9:24.01:0,24,219	0/0:30,0:30:72.03:0,72,659	1/1:4,15:19:36.11:415,36,0	0/0:24,0:24:62.03:0,62,543	0/0:8,0:8:14.99:0,15,137	0/0:23,0:23:62.99:0,63,567	1/1:4,5:9:15.04:173,15,0	0/0:14,0:14:33.01:0,33,302	0/0:17,0:17:39.01:0,39,357	1/1:0,18:18:51.15:588,51,0	0/0:25,0:25:72.02:0,72,656	0/0:12,0:12:24:0,24,219	0/0:5,0:5:15.01:0,15,137
chr10	89235446	.	T	TA	3906.74	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-2.685;DP=496;FS=6.198;HRun=4;HaplotypeScore=60.1439;InbreedingCoeff=0.9979;MQ=85.63;MQ0=0;MQRankSum=-2.912;QD=38.30;ReadPosRankSum=3.211;VQSLOD=3.5664;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.14:0,63,687	0/0:8,0:8:24.07:0,24,272	0/0:13,0:13:24.03:0,24,243	0/0:20,0:20:50.69:0,51,509	1/1:0,19:19:54.18:738,54,0	0/0:24,0:24:66.17:0,66,738	0/0:18,0:18:48.14:0,48,544	0/0:29,0:29:69.19:0,69,783	1/1:2,11:13:39.12:518,39,0	0/0:15,0:15:39.09:0,39,425	0/0:28,0:28:81.22:0,81,909	1/1:0,10:10:30.10:410,30,0	0/0:14,0:14:42.12:0,42,476	1/1:3,16:19:54.18:738,54,0	0/0:22,0:22:63.16:0,63,697	0/0:17,0:17:51.15:0,51,579	0/0:35,0:35:99:0,102,1122	1/1:3,14:17:45.14:600,45,0	0/0:16,0:16:39.11:0,39,442	0/0:15,0:15:45.09:0,45,496	0/0:13,0:13:33.09:0,33,374	1/1:0,8:8:21.07:287,21,0	0/0:14,0:14:39.11:0,39,442	0/0:8,0:8:24.07:0,24,272	1/1:1,15:16:45.15:615,45,0	0/0:28,0:28:81.22:0,81,911	0/0:23,0:23:66.16:0,66,726	0/0:12,0:12:33.06:0,33,361
chr10	89235503	.	ATT	A	5292.56	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=0.814;DP=484;FS=2.162;HRun=8;HaplotypeScore=79.6660;InbreedingCoeff=0.9889;MQ=73.77;MQ0=0;MQRankSum=1.125;QD=31.32;ReadPosRankSum=-0.100;VQSLOD=4.9966;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:54.15:647,54,0	1/1:0,9:9:24.08:293,24,0	0/0:17,0:15:30.06:0,30,413	0/0:16,0:14:21.62:0,22,323	0/0:4,0:26:49.10:0,49,171	0/0:21,0:21:57.20:0,57,964	0/0:12,0:12:33.10:0,33,532	1/1:3,29:32:87.21:1023,87,0	0/0:0,0:11:27.45:0,27,96	0/0:27,0:27:78.27:0,78,1320	0/0:22,0:22:63.22:0,63,1058	0/0:2,0:6:13.36:0,13,46	0/0:12,0:12:33.11:0,33,558	0/0:4,0:17:32.32:0,32,113	1/1:4,15:19:42.13:512,42,0	0/0:15,0:15:39.13:0,39,660	1/1:4,25:29:69.20:842,69,0	0/0:6,0:21:38.59:0,39,210	1/1:1,14:15:42.13:512,42,0	1/1:1,18:19:48.14:585,48,0	0/0:0,0:10:22.46:0,22,79	0/0:0,0:6:12.48:0,12,44	0/0:12,0:14:37.40:0,37,594	0/0:11,0:11:33.11:0,33,554	0/0:6,0:25:50.89:0,51,203	0/0:18,0:18:51.17:0,51,862	1/1:2,24:26:72.22:878,72,0	0/0:7,0:7:21.07:0,21,332
chr10	89235898	.	TCCACCACA	T	11186.02	PASS	AB=0.508;AC=13;AF=0.232;AN=56;BaseQRankSum=16.785;DP=768;FS=6.087;HRun=0;HaplotypeScore=198.1935;InbreedingCoeff=0.8983;MQ=84.71;MQ0=1;MQRankSum=-17.737;QD=69.48;ReadPosRankSum=1.256;VQSLOD=4.2810;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,160,6812	0/0:12,0:12:36.12:0,36,1606	0/0:32,0:32:90.31:0,90,3701	0/0:32,0:32:81.28:0,81,3254	1/1:2,20:22:42.14:1203,42,0	0/0:21,0:21:63.22:0,63,2797	0/0:23,0:23:69.22:0,69,2928	0/0:28,0:28:81.26:0,81,3411	0/1:1,30:31:55.89:2071,0,56	0/0:30,0:30:87.29:0,87,3737	0/0:27,0:27:78.27:0,78,3419	1/1:2,21:23:57.20:1634,57,0	0/0:33,0:33:99:0,99,4262	1/1:2,26:27:75.26:2149,75,0	0/0:31,0:31:90.31:0,90,3931	0/0:21,0:21:54.19:0,54,2320	0/0:42,0:42:99:0,123,5495	1/1:0,18:18:42.14:1205,42,0	0/0:29,0:29:81.25:0,81,3349	0/0:27,0:27:78.27:0,78,3375	0/0:55,0:55:99:0,163,7107	1/1:1,21:22:57.20:1634,57,0	0/0:22,0:22:63.22:0,63,2815	0/0:33,0:33:96.33:0,96,4150	1/1:0,17:17:45.15:1290,45,0	0/0:27,0:27:75.26:0,75,3158	0/0:21,0:21:60.21:0,60,2607	0/0:6,0:6:18.06:0,18,799
chr10	89237717	.	C	CGAGA	3915.41	PASS	AB=0.755;AC=35;AF=0.673;AN=52;BaseQRankSum=1.591;DP=710;FS=4.148;HRun=0;HaplotypeScore=133.9448;InbreedingCoeff=0.0677;MQ=57.69;MQ0=11;MQRankSum=-3.452;QD=6.66;ReadPosRankSum=-4.077;VQSLOD=1.2369;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,12:34:11.46:501,0,11	0/1:10,0:13:6.49:6,0,42	./.	./.	0/1:22,0:22:1.70:2,0,2	0/1:17,2:24:78.55:81,0,79	0/1:13,7:21:43.11:401,0,43	1/1:40,0:40:10.19:66,10,0	1/1:26,0:26:21.73:287,22,0	0/1:21,0:31:45.58:59,0,46	1/1:19,0:23:5.49:24,5,0	1/1:30,0:29:13.86:202,14,0	0/0:20,0:25:39.11:0,39,550	1/1:20,0:20:12.02:175,12,0	0/1:22,11:39:24.31:238,0,24	0/1:18,2:32:4.17:297,0,4	1/1:17,3:21:23.82:471,24,0	1/1:14,0:14:5.97:68,6,0	1/1:24,1:26:17.26:230,17,0	1/1:19,2:29:9.03:177,9,0	0/1:16,8:28:32.10:208,0,32	1/1:24,0:23:6.78:28,7,0	0/0:20,0:22:18.05:0,18,240	0/0:26,0:29:51.15:0,51,734	1/1:15,0:15:6.64:59,7,0	0/1:23,0:34:99:112,0,215	1/1:13,2:24:14.27:209,14,0	0/1:6,0:12:11.14:11,0,61
chr10	89237722	.	G	GAGAGAGAGAGAA	3607.54	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=0.551;DP=743;FS=6.541;HRun=0;HaplotypeScore=215.6467;InbreedingCoeff=0.4897;MQ=55.24;MQ0=14;MQRankSum=-5.064;QD=11.20;ReadPosRankSum=-2.325;VQSLOD=1.7485;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:4.85:0,5,509	0/0:9,0:9:18.09:0,18,250	0/0:18,0:9:11.96:0,12,108	0/0:29,0:15:20.94:0,21,176	1/1:16,3:27:37.78:253,38,0	0/0:23,0:23:23.50:0,24,460	0/0:20,0:20:34.08:0,34,359	0/1:38,0:37:51.56:52,0,377	1/1:5,23:32:24.87:1069,25,0	0/0:37,0:38:83.26:0,83,910	0/0:20,0:20:32.99:0,33,323	1/1:6,21:31:8.05:725,8,0	0/0:26,0:26:66.02:0,66,1550	1/1:4,16:26:12.47:557,12,0	0/0:40,0:39:53.92:0,54,599	0/0:32,0:32:0.27:0,0,417	0/1:22,0:22:57.16:57,0,236	1/1:11,0:15:4.01:468,4,0	0/1:30,0:28:99:109,0,298	0/1:30,0:29:34.23:34,0,155	0/0:27,0:26:19.64:0,20,251	1/1:8,13:23:16.84:103,17,0	0/0:23,0:23:48.02:0,48,802	0/0:28,0:28:66.15:0,66,1841	1/1:6,9:22:8.93:159,9,0	0/0:35,0:35:62.66:0,63,1280	0/1:24,0:24:21.50:21,0,215	0/0:18,0:16:20.74:0,21,312
chr10	89240205	.	T	TTA	360.47	PASS	AB=0.844;AC=8;AF=0.154;AN=52;BaseQRankSum=1.866;DP=245;FS=3.871;HRun=0;HaplotypeScore=52.7534;InbreedingCoeff=0.4292;MQ=74.35;MQ0=2;MQRankSum=-0.971;QD=9.49;ReadPosRankSum=-2.664;VQSLOD=2.0890;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:40.09:0,40,428	0/0:3,0:3:8.93:0,9,63	0/1:14,0:9:22.64:32,0,23	0/0:15,0:9:0.33:0,0,26	1/1:5,0:5:3.01:49,3,0	0/0:10,0:10:27.06:0,27,304	0/0:6,0:6:9.03:0,9,111	0/0:33,0:32:39.12:0,39,367	1/1:5,1:6:6.02:89,6,0	0/0:5,0:5:12:0,12,112	0/0:7,0:7:18.06:0,18,221	./.	0/0:4,0:4:9.03:0,9,111	0/0:2,0:2:2.50:0,2,9	0/0:5,0:5:11.91:0,12,84	0/0:5,0:5:9.03:0,9,111	0/0:18,0:18:43.59:0,44,300	0/1:6,5:11:0.04:264,0,0	0/0:12,0:12:15.50:0,16,91	0/0:10,0:10:17.80:0,18,122	0/0:5,0:5:12.04:0,12,148	1/1:2,0:2:3.01:49,3,0	0/0:3,0:3:3.01:0,3,37	0/0:4,0:4:3.01:0,3,37	./.	0/0:8,0:8:12.04:0,12,148	0/0:11,0:11:23.72:0,24,164	0/0:6,0:6:15.03:0,15,171
chr10	89240225	.	G	GTATA	312.35	PASS	AB=0.881;AC=11;AF=0.220;AN=50;BaseQRankSum=3.588;DP=247;FS=0.000;HRun=0;HaplotypeScore=62.6470;InbreedingCoeff=0.5265;MQ=74.92;MQ0=2;MQRankSum=-2.671;QD=5.78;ReadPosRankSum=0.490;VQSLOD=1.6221;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:74.18:0,74,1077	0/0:2,0:2:6.02:0,6,106	1/1:14,0:9:2.56:14,3,0	0/1:24,0:15:1.93:9,0,2	./.	0/0:11,0:11:30.10:0,30,512	0/0:4,0:4:12.04:0,12,206	0/0:43,0:42:99:0,102,1238	1/1:0,1:1:3.01:71,3,0	0/0:9,0:9:27.07:0,27,371	0/0:10,0:10:27.07:0,27,420	1/1:3,0:3:3.01:49,3,0	0/0:5,0:5:12.01:0,12,154	1/1:0,1:1:3.01:74,3,0	0/0:4,0:4:9.03:0,9,159	0/0:3,0:3:6.02:0,6,102	0/0:16,0:16:39.12:0,39,627	0/1:4,2:9:18.01:222,0,18	0/0:9,0:9:23.87:0,24,267	0/0:8,0:8:24.07:0,24,383	0/0:6,0:6:18.04:0,18,262	0/1:1,0:1:0:0,0,0	0/0:4,0:4:12.01:0,12,149	./.	./.	0/0:7,0:7:21.04:0,21,315	0/0:9,0:9:27.04:0,27,376	0/0:8,0:8:21.04:0,21,319
chr10	89240342	.	CT	C	1953.43	PASS	AB=0.700;AC=29;AF=0.518;AN=56;BaseQRankSum=8.516;DP=361;FS=6.715;HRun=13;HaplotypeScore=49.6399;InbreedingCoeff=0.8349;MQ=62.20;MQ0=2;MQRankSum=2.593;QD=8.96;ReadPosRankSum=2.654;VQSLOD=2.3261;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:38.75:284,39,0	0/1:4,3:7:20.26:35,0,20	0/0:14,0:9:8.98:0,9,74	0/0:4,0:4:3.48:0,3,31	1/1:4,12:16:29.62:211,30,0	0/0:13,0:13:24.03:0,24,229	0/0:13,0:13:39.03:0,39,368	1/1:7,1:30:41.35:131,41,0	1/1:4,9:13:23.82:175,24,0	0/0:11,1:12:3.37:0,3,185	0/0:14,0:15:26.99:0,27,253	1/1:3,3:6:8.92:66,9,0	0/0:7,0:7:17.94:0,18,157	1/1:1,4:5:8.95:66,9,0	1/1:3,9:12:20.88:153,21,0	0/0:5,0:5:9.01:0,9,88	1/1:3,12:15:35.79:263,36,0	1/1:4,15:19:32.26:307,32,0	1/1:3,0:9:10.17:29,10,0	1/1:4,0:22:35.99:111,36,0	0/0:11,0:10:30.04:0,30,287	1/1:2,4:6:11.92:88,12,0	0/0:8,0:8:18.03:0,18,175	0/0:15,0:15:30.03:0,30,286	1/1:4,9:15:24.88:165,25,0	0/0:7,0:7:15.01:0,15,140	1/1:2,0:20:30.39:88,30,0	0/0:19,0:19:27:0,27,242
chr10	89241236	.	ATG	A	3471.60	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.934;DP=590;FS=11.247;HRun=0;HaplotypeScore=76.5925;InbreedingCoeff=0.9958;MQ=66.53;MQ0=4;MQRankSum=-0.896;QD=30.45;ReadPosRankSum=4.085;VQSLOD=5.1944;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,108,1820	0/0:6,0:6:15.05:0,15,255	0/0:19,0:14:36.02:0,36,536	0/0:21,0:20:45.12:0,45,694	1/1:0,21:21:48.15:624,48,0	0/0:23,0:23:63.22:0,63,1059	0/0:23,0:23:57.20:0,57,969	0/0:43,0:43:99:0,105,1657	1/1:2,21:22:48.14:624,48,0	0/0:20,0:20:57.20:0,57,970	0/0:9,0:9:27.05:0,27,412	1/1:1,13:14:36.12:468,36,0	0/0:18,0:18:36.12:0,36,608	1/1:3,19:22:54.18:702,54,0	0/0:19,0:19:51.17:0,51,867	0/0:18,0:18:51.17:0,51,867	0/0:17,0:17:36.10:0,36,583	1/1:3,11:14:33.58:430,34,0	0/0:30,0:29:75.24:0,75,1227	0/0:17,0:17:45.15:0,45,754	0/0:48,0:48:99:0,141,2332	1/1:1,11:12:27.09:351,27,0	0/0:11,0:11:33.08:0,33,507	0/0:26,0:26:66.23:0,66,1121	1/1:0,8:8:21.07:273,21,0	0/0:33,0:33:96.32:0,96,1604	0/0:23,0:22:63.17:0,63,1020	0/0:12,0:12:36.12:0,36,612
chr10	89241352	.	TG	T	4024.70	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.542;DP=443;FS=1.592;HRun=1;HaplotypeScore=43.4991;InbreedingCoeff=0.9851;MQ=67.85;MQ0=0;MQRankSum=0.044;QD=39.07;ReadPosRankSum=2.274;VQSLOD=3.9519;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.26:0,84,1203	0/0:10,0:10:30.10:0,30,439	0/0:7,0:7:17.82:0,18,207	0/0:6,0:5:12.04:0,12,162	1/1:0,18:18:54.18:749,54,0	0/0:19,0:19:54.08:0,54,668	0/0:8,0:8:11.65:0,12,231	0/0:39,0:39:99:0,117,1655	1/1:0,11:11:33.11:458,33,0	0/0:24,0:24:72.23:0,72,1033	0/0:9,0:9:27.06:0,27,353	1/1:2,10:12:36.10:472,36,0	0/0:12,0:12:36.10:0,36,506	1/1:0,8:8:21.07:292,21,0	0/0:13,0:13:39.13:0,39,570	0/0:14,0:14:42.11:0,42,574	0/0:22,0:22:66.21:0,66,944	1/1:0,26:26:72.24:994,72,0	0/0:18,0:18:54.18:0,54,791	0/0:18,0:18:51.61:0,52,699	0/0:10,0:10:30.05:0,30,379	1/1:0,12:12:36.03:458,36,0	0/0:19,0:19:57.18:0,57,814	0/0:8,0:8:24.05:0,24,311	1/1:1,15:16:45.06:602,45,0	0/0:33,0:33:99:0,99,1394	0/0:12,0:12:36.02:0,36,472	0/0:11,0:11:33.09:0,33,461
chr10	89241989	.	GTTT	G	2282.45	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.502;DP=490;FS=13.977;HRun=7;HaplotypeScore=106.4991;InbreedingCoeff=0.9859;MQ=82.98;MQ0=7;MQRankSum=-9.617;QD=31.70;ReadPosRankSum=2.136;VQSLOD=1.1218;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:36.12:0,36,803	0/0:5,0:5:15.05:0,15,315	0/0:67,0:47:81.66:0,82,1449	0/0:56,0:36:21.84:0,22,934	1/1:3,7:10:18.06:275,18,0	0/0:19,0:19:54.19:0,54,1185	0/0:15,0:15:39.13:0,39,871	0/0:23,0:23:57.20:0,57,1233	1/1:2,12:14:33.11:506,33,0	0/0:9,0:9:21.07:0,21,469	0/0:12,0:12:36.12:0,36,781	1/1:1,10:10:27.09:414,27,0	0/0:13,0:13:39.13:0,39,835	1/1:1,11:12:30.10:459,30,0	0/0:20,0:20:57.15:0,57,1177	0/0:16,0:16:42.14:0,42,911	0/0:26,0:26:69.22:0,69,1362	1/1:2,7:9:21.07:322,21,0	0/0:13,0:13:36.11:0,36,718	0/0:14,0:14:42.14:0,42,936	0/0:17,0:17:36.12:0,36,757	1/1:3,4:7:12.04:183,12,0	0/0:17,0:17:48.15:0,48,1027	0/0:18,0:18:48.15:0,48,988	1/1:2,7:9:21.07:321,21,0	0/0:20,0:20:57.19:0,57,1224	0/0:13,0:12:33.04:0,33,658	0/0:8,0:8:21.07:0,21,469
chr10	89242049	.	TGGTTC	T	1104.57	PASS	AB=0.869;AC=9;AF=0.161;AN=56;BaseQRankSum=-0.778;DP=330;FS=10.892;HRun=0;HaplotypeScore=83.8147;InbreedingCoeff=-0.1638;MQ=51.06;MQ0=31;MQRankSum=-2.230;QD=6.99;ReadPosRankSum=-1.306;VQSLOD=0.7154;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,2:14:99:127,0,532	0/0:9,0:9:21.02:0,21,329	0/1:22,0:6:12.19:12,0,87	0/1:20,0:7:24.41:57,0,24	0/0:3,0:2:3.85:0,4,11	0/0:13,0:12:26.88:0,27,542	0/0:14,0:13:25.80:0,26,518	0/1:24,5:27:99:274,0,719	0/0:2,0:2:2.80:0,3,8	0/0:13,0:12:31.93:0,32,634	0/0:16,0:16:41.92:0,42,779	0/0:2,0:2:3.62:0,4,12	0/0:8,0:7:15.52:0,16,289	0/0:6,0:4:7.63:0,8,66	0/0:11,0:10:15.69:0,16,419	0/0:13,0:13:32.87:0,33,773	0/1:17,2:18:51.09:51,0,351	0/0:4,0:3:1.05:0,1,14	0/1:10,0:12:99:123,0,477	0/1:9,8:17:99:411,0,282	0/1:3,0:3:25.32:25,0,49	0/0:1,0:1:1.82:0,2,5	0/0:18,0:17:45.12:0,45,929	0/0:14,0:13:36.10:0,36,650	0/0:2,0:1:1.82:0,2,5	0/0:13,0:12:33.06:0,33,625	0/1:12,0:15:99:159,0,412	0/0:9,0:6:15.05:0,15,370
chr10	89242761	.	G	GT	3845.90	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-4.647;DP=577;FS=4.349;HRun=10;HaplotypeScore=70.0706;InbreedingCoeff=0.9542;MQ=75.96;MQ0=0;MQRankSum=-1.322;QD=18.58;ReadPosRankSum=-2.550;VQSLOD=3.4854;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:6,39:45:74.98:971,75,0	1/1:2,0:8:14.32:76,14,0	0/0:26,0:26:29.10:0,29,269	0/0:26,0:25:35.54:0,36,282	0/0:24,0:24:62.87:0,63,512	0/0:18,0:18:47.91:0,48,390	0/0:20,1:21:18.93:0,19,362	1/1:7,19:26:56.16:573,56,0	0/0:19,0:20:55.96:0,56,446	0/0:21,0:21:50.90:0,51,416	0/0:15,0:15:35.94:0,36,295	0/0:17,0:17:38.94:0,39,320	0/0:9,1:11:0.02:0,0,196	0/0:22,0:22:55.70:0,56,445	1/1:6,1:14:28.90:177,29,0	0/0:17,0:17:44.95:0,45,369	1/1:6,3:41:80.42:450,80,0	0/0:36,1:37:57.86:0,58,678	1/1:8,15:23:23.45:445,23,0	1/1:3,15:18:23.40:428,23,0	1/1:2,7:9:24.05:248,24,0	0/0:15,0:15:38.95:0,39,320	0/0:14,0:15:31.97:0,32,250	0/0:18,0:18:38.92:0,39,316	0/0:15,0:16:40.96:0,41,322	0/0:21,0:21:50.93:0,51,419	1/1:2,21:23:44.98:478,45,0	0/0:9,0:9:26.96:0,27,219
chr10	89243270	.	G	GAA	3963.26	PASS	AB=0.985;AC=34;AF=0.607;AN=56;BaseQRankSum=5.214;DP=446;FS=2.311;HRun=13;HaplotypeScore=121.7800;InbreedingCoeff=0.7754;MQ=73.38;MQ0=1;MQRankSum=-4.597;QD=12.87;ReadPosRankSum=-5.569;VQSLOD=1.1257;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:13,2:25:42.85:419,43,0	1/1:5,0:6:11.93:97,12,0	0/1:31,1:20:32.53:33,0,66	0/1:38,0:17:10.89:11,0,56	1/1:11,5:16:32.99:353,33,0	0/0:11,0:14:20.01:0,20,140	0/0:12,0:13:28.67:0,29,262	1/1:9,5:16:21.01:259,21,0	1/1:10,5:15:21.02:263,21,0	0/0:8,0:12:7.78:0,8,79	0/0:8,0:9:23.93:0,24,204	1/1:13,3:16:0.12:226,0,0	0/0:10,0:10:12.31:0,12,107	1/1:6,5:12:23.07:216,23,0	1/1:9,3:14:23.50:255,24,0	0/0:15,0:15:23.80:0,24,211	1/1:9,1:16:5.61:257,6,0	1/1:8,5:15:29.01:304,29,0	1/1:10,0:15:18.96:123,19,0	1/1:8,4:15:23.18:234,23,0	1/1:9,1:12:22.83:230,23,0	1/1:7,2:11:15.40:154,15,0	0/0:15,0:15:23.69:0,24,205	0/0:14,0:17:19.89:0,20,141	1/1:11,1:13:16.35:175,16,0	0/0:12,0:14:23.59:0,24,192	1/1:12,7:19:27.09:356,27,0	0/0:16,0:19:36.46:0,36,253
chr10	89243302	.	TG	T	1593.58	PASS	AB=0.965;AC=31;AF=0.554;AN=56;BaseQRankSum=6.251;DP=575;FS=25.784;HRun=11;HaplotypeScore=94.8446;InbreedingCoeff=0.4142;MQ=84.99;MQ0=12;MQRankSum=-3.796;QD=4.20;ReadPosRankSum=3.662;VQSLOD=0.2282;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,15:26:25.42:311,25,0	1/1:2,0:10:17.05:55,17,0	0/1:92,1:37:37.61:38,0,160	0/0:88,0:34:10.52:0,11,184	1/1:5,17:23:57.58:403,58,0	0/0:12,0:12:27.94:0,28,279	0/1:12,0:12:5.47:5,0,236	0/1:21,1:23:6.94:7,0,217	1/1:1,6:7:14.97:122,15,0	0/1:15,0:15:4.87:5,0,270	0/1:18,3:21:40.42:40,0,205	1/1:7,4:11:17.70:136,18,0	0/0:8,0:8:18.02:0,18,177	0/1:9,1:10:10.57:56,0,11	1/1:3,0:14:24.68:74,25,0	0/0:8,0:9:17.88:0,18,173	1/1:3,1:17:19.29:73,19,0	1/1:2,10:12:14.98:123,15,0	0/0:22,0:22:35.98:0,36,341	0/0:14,0:14:17.97:0,18,162	1/1:6,0:11:6.11:18,6,0	1/1:8,6:14:24.56:173,25,0	0/0:19,2:21:10.77:0,11,372	0/1:11,0:11:6.01:6,0,168	1/1:3,8:11:14.96:122,15,0	0/1:17,0:17:0.70:1,0,162	0/1:19,1:20:24.95:25,0,237	0/0:21,0:21:39.83:0,40,417
chr10	89243413	.	GATCTGCCTAC	G	331.87	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.146;DP=512;FS=2.029;HRun=0;HaplotypeScore=151.6434;InbreedingCoeff=0.9627;MQ=67.50;MQ0=0;MQRankSum=-3.259;QD=23.70;ReadPosRankSum=-0.482;VQSLOD=3.2621;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,5400	0/0:8,0:8:24.08:0,24,1298	0/0:18,0:18:47.93:0,48,1788	0/0:26,0:25:72.05:0,72,2740	0/0:27,0:27:81.26:0,81,4143	0/0:23,0:23:69.24:0,69,3619	0/0:16,0:16:45.11:0,45,1750	0/0:18,0:18:54.17:0,54,2372	0/0:15,0:15:45.14:0,45,2201	0/0:18,0:18:54.16:0,54,2525	0/0:16,0:16:48.14:0,48,2322	0/0:20,0:20:54.16:0,54,1973	0/0:11,0:11:33.11:0,33,1687	0/0:9,0:9:24.05:0,24,983	0/0:18,0:18:51.14:0,51,2256	0/0:16,0:16:48.15:0,48,2066	0/0:33,0:33:93.26:0,93,4550	0/0:20,0:20:54.15:0,54,2757	0/0:17,0:17:51.18:0,51,2629	0/0:13,0:13:39.12:0,39,1800	1/1:0,14:13:12.04:418,12,0	0/0:11,0:11:33.09:0,33,1400	0/0:17,0:17:51.14:0,51,2163	0/0:27,0:27:81.18:0,81,3655	0/0:11,0:11:33.11:0,33,1784	0/0:24,0:24:72.22:0,72,3522	0/0:20,0:20:60.21:0,60,3182	0/0:9,0:9:27.02:0,27,1057
chr10	89243499	.	T	TTG	1097.85	PASS	AB=0.912;AC=32;AF=0.615;AN=52;BaseQRankSum=4.148;DP=550;FS=2.483;HRun=0;HaplotypeScore=92.2675;InbreedingCoeff=0.4658;MQ=60.57;MQ0=12;MQRankSum=-1.569;QD=3.02;ReadPosRankSum=-1.692;VQSLOD=2.1150;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:33:29.62:240,30,0	1/1:4,0:7:5.84:52,6,0	./.	./.	1/1:15,0:14:3:27,3,0	0/1:23,1:24:7.27:7,0,291	0/0:24,0:24:6.56:0,7,152	1/1:14,0:14:1.77:4,2,0	1/1:7,0:14:15:131,15,0	0/0:18,0:17:4.73:0,5,38	0/0:11,0:10:2.92:0,3,17	1/1:10,0:22:6:55,6,0	0/1:13,0:14:0.36:0,0,125	1/1:24,0:23:8.61:67,9,0	1/1:24,9:34:17.95:202,18,0	0/0:17,0:18:20.78:0,21,187	0/1:17,1:31:49.23:82,0,49	1/1:24,0:24:15.11:111,15,0	1/1:16,0:15:5.05:50,5,0	1/1:18,0:18:6:52,6,0	0/0:24,0:29:11.45:0,11,56	1/1:9,0:9:3:26,3,0	0/0:9,0:8:12.01:0,12,119	0/0:29,0:30:28.17:0,28,301	1/1:15,0:14:6:52,6,0	0/1:27,0:27:25.62:41,0,26	1/1:11,1:20:6.01:70,6,0	0/0:8,0:8:8.81:0,9,59
chr10	89244318	.	T	TA	77.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.795;DP=615;FS=0.000;HRun=0;HaplotypeScore=70.9100;InbreedingCoeff=0.7677;MQ=64.55;MQ0=0;MQRankSum=-0.483;QD=7.00;ReadPosRankSum=-0.519;VQSLOD=2.9881;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.21:0,90,1186	0/0:10,0:10:30.10:0,30,420	0/0:10,0:9:0.87:0,1,126	0/0:11,0:11:20.94:0,21,222	0/0:16,0:16:48.16:0,48,671	0/0:28,0:28:84.27:0,84,1159	0/0:25,0:25:75.11:0,75,964	0/0:31,0:31:93.28:0,93,1230	0/0:20,0:20:60.19:0,60,815	0/0:24,0:24:68.41:0,68,910	0/0:19,0:19:54.18:0,54,746	0/0:19,0:19:57.19:0,57,797	0/0:23,0:23:66.19:0,66,887	0/0:17,0:17:51.05:0,51,672	0/0:31,0:31:90.27:0,90,1192	0/0:25,0:25:75.24:0,75,1023	0/0:40,0:40:99:0,120,1634	0/0:27,0:27:78.23:0,78,1070	0/0:13,0:13:39.13:0,39,545	0/0:22,0:22:63.20:0,63,866	1/1:5,6:11:11.12:162,11,0	0/0:21,0:21:60.19:0,60,818	0/0:23,0:23:66.19:0,66,870	0/0:19,0:19:57.15:0,57,773	0/0:25,0:25:75.23:0,75,1028	0/0:24,0:24:69.23:0,69,965	0/0:23,0:23:69.22:0,69,949	0/0:26,0:26:78.26:0,78,1090
chr10	89244781	.	TTTTG	T	3112.96	PASS	AB=0.958;AC=13;AF=0.241;AN=54;BaseQRankSum=3.724;DP=608;FS=13.587;HRun=0;HaplotypeScore=111.4119;InbreedingCoeff=0.8536;MQ=68.21;MQ0=3;MQRankSum=1.182;QD=19.34;ReadPosRankSum=2.723;VQSLOD=2.8444;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,23:35:54.18:849,54,0	1/1:4,5:9:12.04:189,12,0	0/0:20,0:17:6.02:0,6,118	0/0:14,0:14:15.05:0,15,299	0/0:11,0:20:30.08:0,30,482	1/1:6,12:18:33.11:519,33,0	1/1:11,10:20:21.03:303,21,0	0/0:32,0:32:11.11:0,11,453	0/0:9,0:19:24.08:0,24,419	0/0:22,0:22:33.11:0,33,783	0/0:18,0:18:27.09:0,27,613	0/0:13,0:20:18.06:0,18,306	0/0:16,0:16:33.11:0,33,728	0/0:10,0:20:36.12:0,36,622	1/1:6,13:18:27.09:425,27,0	0/0:13,0:13:27.08:0,27,552	1/1:10,26:36:35.87:1004,36,0	0/0:11,0:26:39.13:0,39,686	0/0:17,0:17:21.07:0,21,495	0/0:27,0:27:51.11:0,51,1067	./.	0/0:11,0:26:48.12:0,48,779	0/0:21,0:21:33.11:0,33,765	0/0:35,0:35:37.09:0,37,1245	0/0:12,0:23:33.11:0,33,585	0/0:34,0:34:63.19:0,63,1431	0/1:22,1:21:8.05:8,0,810	0/0:11,0:11:6.02:0,6,128
chr10	89245202	.	TG	T	7640.28	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.109;DP=687;FS=0.312;HRun=1;HaplotypeScore=67.2931;InbreedingCoeff=0.9971;MQ=86.86;MQ0=0;MQRankSum=-0.215;QD=34.89;ReadPosRankSum=1.469;VQSLOD=4.7139;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,40:41:92.83:1279,93,0	1/1:0,10:10:21.07:293,21,0	0/0:22,0:22:62.70:0,63,978	0/0:24,0:24:72.24:0,72,1124	0/0:20,0:20:60.20:0,60,931	0/0:18,0:18:51.16:0,51,783	0/0:42,0:42:99:0,126,2010	1/1:0,26:26:69.19:912,69,0	0/0:31,0:31:93.32:0,93,1485	0/0:28,0:28:81.28:0,81,1293	0/0:21,0:21:60.20:0,60,956	0/0:30,0:30:90.15:0,90,1365	0/0:15,0:15:45.15:0,45,715	0/0:26,0:26:78.25:0,78,1219	1/1:0,35:35:90.30:1258,90,0	0/0:11,0:11:33.11:0,33,527	1/1:1,46:47:99:1631,117,0	0/0:29,0:29:81.28:0,81,1289	1/1:0,27:27:81.20:1088,81,0	1/1:1,16:17:17.99:549,18,0	0/0:46,0:46:99:0,135,2157	0/0:18,0:18:51.16:0,51,783	0/0:11,0:11:30.10:0,30,479	0/0:32,0:32:96.28:0,96,1501	0/0:17,0:17:51.17:0,51,800	0/0:20,0:20:60.20:0,60,959	1/1:0,16:16:45.15:629,45,0	0/0:7,0:7:21.07:0,21,336
chr10	89245922	.	TC	T	2674.86	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.213;DP=524;FS=0.435;HRun=4;HaplotypeScore=68.1499;InbreedingCoeff=0.9748;MQ=78.73;MQ0=1;MQRankSum=-7.570;QD=27.86;ReadPosRankSum=2.145;VQSLOD=3.1285;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.07:0,60,775	0/0:8,0:8:24.04:0,24,299	0/0:21,0:18:6.11:0,6,481	0/0:24,0:22:40.42:0,40,433	1/1:3,16:19:49.63:525,50,0	0/0:20,0:20:54.15:0,54,720	0/0:21,0:21:51.08:0,51,641	0/0:41,0:41:99:0,111,1381	1/1:2,9:11:30.08:348,30,0	0/0:23,0:23:66.17:0,66,873	0/0:21,0:21:54.14:0,54,701	1/1:0,11:11:33.05:373,33,0	0/0:15,0:15:45.12:0,45,593	1/1:5,8:13:27.03:296,27,0	0/0:16,0:16:48.12:0,48,607	0/0:22,0:22:66.17:0,66,854	0/0:28,0:28:73.97:0,74,920	1/1:4,12:15:39.08:449,39,0	0/0:21,0:21:63.18:0,63,820	0/0:22,0:22:63.20:0,63,862	0/0:18,0:18:36.04:0,36,444	1/1:0,10:10:27.08:321,27,0	0/0:9,0:9:27.06:0,27,343	0/0:4,0:4:12.04:0,12,167	1/1:2,14:16:48.14:562,48,0	0/0:21,0:21:60.18:0,60,794	0/0:23,0:21:66.19:0,66,888	0/0:25,0:25:71.98:0,72,925
chr10	89245936	.	T	TTTTA	4144.53	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=8.155;DP=486;FS=1.669;HRun=0;HaplotypeScore=90.5211;InbreedingCoeff=0.9184;MQ=70.31;MQ0=2;MQRankSum=-8.613;QD=38.38;ReadPosRankSum=0.583;VQSLOD=3.4588;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:56.92:0,57,835	0/0:5,0:5:9.03:0,9,152	0/0:22,0:17:23.17:0,23,407	0/0:22,0:18:0.53:0,1,261	1/1:9,12:21:51.07:1060,51,0	0/0:18,0:18:36.11:0,36,583	0/0:17,0:17:42.13:0,42,654	0/0:32,0:32:60.60:0,61,861	1/1:6,6:12:20.98:411,21,0	0/0:22,0:21:39.12:0,39,615	0/0:19,0:19:30.10:0,30,500	1/1:5,7:12:27.02:573,27,0	0/0:14,0:14:39.11:0,39,608	1/1:3,7:9:15.05:368,15,0	0/0:13,0:13:24.07:0,24,380	0/0:19,0:19:39.12:0,39,629	0/0:23,0:23:69.20:0,69,1087	1/1:9,9:18:10.92:546,11,0	0/0:22,0:22:48.16:0,48,798	0/0:21,0:21:54.13:0,54,857	1/1:2,6:9:9.03:222,9,0	1/1:7,3:10:11.95:235,12,0	0/0:9,0:9:21.03:0,21,324	0/0:4,0:4:12.04:0,12,199	1/1:6,10:15:30.10:728,30,0	0/0:19,0:19:36.11:0,36,561	0/0:28,0:27:75.24:0,75,1226	0/0:21,0:21:36.08:0,36,529
chr10	89246213	.	C	CT	237.44	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.666;DP=565;FS=11.720;HRun=9;HaplotypeScore=55.7310;InbreedingCoeff=0.9206;MQ=61.06;MQ0=3;MQRankSum=-0.038;QD=12.50;ReadPosRankSum=-0.285;VQSLOD=1.6212;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,15:19:30.08:332,30,0	0/0:9,0:9:23.99:0,24,208	0/0:9,0:6:11.84:0,12,92	0/0:8,0:9:16.48:0,16,110	0/0:31,0:32:79.94:0,80,671	0/0:22,0:22:44.95:0,45,384	0/0:12,0:12:23.99:0,24,208	0/0:36,0:36:80.88:0,81,686	0/0:26,0:26:68.80:0,69,577	0/0:23,0:23:62.97:0,63,542	0/0:24,0:24:53.87:0,54,459	0/0:18,0:18:50.89:0,51,429	0/0:12,0:12:32.99:0,33,286	0/0:14,0:14:38.97:0,39,333	0/0:31,0:31:71.95:0,72,618	0/0:20,0:20:50.98:0,51,443	0/0:31,0:31:80.91:0,81,687	0/0:9,0:9:17.94:0,18,149	0/0:21,0:20:50.95:0,51,436	0/0:43,0:43:99:0,114,977	0/0:10,0:10:20.98:0,21,182	0/0:12,0:12:13.20:0,13,221	0/0:18,0:18:41.96:0,42,356	0/0:9,0:9:26.01:0,26,208	0/0:17,0:17:44.97:0,45,387	0/0:24,0:24:53.97:0,54,469	0/0:34,0:34:92.95:0,93,803	0/0:21,0:21:44.58:0,45,374
chr10	89246551	.	AGAAGGAAGGAAG	A	2183.36	PASS	AB=0.944;AC=21;AF=0.438;AN=48;BaseQRankSum=5.992;DP=652;FS=17.520;HRun=0;HaplotypeScore=219.0506;InbreedingCoeff=0.7225;MQ=72.65;MQ0=3;MQRankSum=-6.740;QD=8.80;ReadPosRankSum=-0.107;VQSLOD=1.0416;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:37:4.73:0,5,54	1/1:7,0:9:1.55:4,2,0	./.	./.	1/1:12,17:29:20.95:447,21,0	0/0:13,0:20:15.05:0,15,381	0/0:19,0:19:12.04:0,12,325	./.	1/1:14,21:35:15.05:493,15,0	0/0:29,0:29:27.09:0,27,1122	0/0:20,0:20:21.07:0,21,1140	1/1:18,13:30:6.02:204,6,0	0/0:24,0:24:36.12:0,36,1719	1/1:12,10:22:18.06:611,18,0	0/0:23,0:22:2.22:0,2,7	0/0:25,0:38:36.75:0,37,805	0/1:32,0:33:1.63:2,0,169	1/1:8,0:8:3.09:23,3,0	./.	1/1:22,0:22:7.87:114,8,0	0/0:30,0:30:17.74:0,18,171	1/1:14,9:23:6.91:206,7,0	0/0:14,0:14:15.05:0,15,605	0/0:33,0:34:48.16:0,48,2141	1/1:11,8:19:6.02:204,6,0	0/0:26,0:25:33.11:0,33,1237	1/1:16,0:16:1.65:48,2,0	0/0:6,0:6:12.04:0,12,646
chr10	89246580	.	GAA	G	815.15	PASS	AB=0.696;AC=4;AF=0.071;AN=56;BaseQRankSum=11.119;DP=563;FS=10.053;HRun=2;HaplotypeScore=92.3726;InbreedingCoeff=-0.1001;MQ=51.68;MQ0=14;MQRankSum=-4.841;QD=17.34;ReadPosRankSum=6.024;VQSLOD=0.3407;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:61.38:0,61,1023	0/0:4,0:4:5.71:0,6,103	0/0:8,0:2:6.02:0,6,88	0/0:9,0:2:6.02:0,6,88	0/0:23,0:23:31.17:0,31,534	0/0:15,0:14:14.87:0,15,259	0/0:20,0:20:34.27:0,34,680	0/1:4,5:8:99:191,0,102	0/0:34,0:34:18.10:0,18,505	0/0:29,0:27:78.26:0,78,1280	0/0:16,0:16:48.15:0,48,800	0/0:24,0:23:16.82:0,17,381	0/0:25,0:23:69.23:0,69,1179	0/0:24,0:24:5.11:0,5,484	0/0:18,0:17:51.13:0,51,696	0/0:34,0:34:45.31:0,45,839	0/0:41,0:37:84.52:0,85,1218	0/0:13,0:12:33.11:0,33,482	0/1:4,1:4:36.07:36,0,96	0/1:8,12:20:99:494,0,173	0/0:34,0:34:85.52:0,86,1228	0/0:19,0:19:16.77:0,17,362	0/0:11,0:10:27.09:0,27,464	0/0:29,0:29:74.51:0,75,1334	0/0:14,0:14:7.74:0,8,250	0/0:27,0:25:75.21:0,75,1195	0/1:7,6:13:99:203,0,228	0/0:6,0:6:18.06:0,18,332
chr10	89246592	.	G	GGA	335.61	PASS	AB=0.808;AC=2;AF=0.036;AN=56;BaseQRankSum=5.328;DP=610;FS=1.185;HRun=0;HaplotypeScore=98.2317;InbreedingCoeff=-0.0486;MQ=51.64;MQ0=14;MQRankSum=-4.780;QD=9.87;ReadPosRankSum=-0.154;VQSLOD=3.3590;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:59.02:0,59,959	0/0:5,0:5:9:0,9,115	0/0:9,0:2:6.02:0,6,95	0/0:18,0:3:6.02:0,6,97	0/0:26,0:26:54.05:0,54,769	0/0:20,0:19:48:0,48,601	0/0:21,0:21:60.20:0,60,950	0/0:7,0:6:13.28:0,13,198	0/0:31,0:31:44.96:0,45,578	0/0:32,0:30:84.26:0,84,1278	0/0:22,0:22:63.21:0,63,1013	0/0:22,0:21:30.02:0,30,422	0/0:28,0:26:78.25:0,78,1244	0/0:25,0:25:59.92:0,60,750	0/0:23,0:22:66.19:0,66,1000	0/0:40,0:40:99:0,102,1428	0/0:41,0:38:99:0,105,1419	0/0:13,0:12:33.11:0,33,536	0/0:7,0:6:15.05:0,15,244	0/1:14,7:21:99:304,0,493	0/0:31,0:31:79.44:0,79,1211	0/0:17,0:17:29.36:0,29,364	0/0:21,0:20:48.15:0,48,751	0/0:33,0:33:90.01:0,90,1378	0/0:15,0:15:26.92:0,27,323	0/0:25,0:23:69.24:0,69,1125	0/1:11,2:13:99:120,0,398	0/0:9,0:9:27.09:0,27,440
chr10	89247020	.	AAGGG	A	209.46	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.160;DP=456;FS=0.000;HRun=0;HaplotypeScore=74.8037;InbreedingCoeff=0.5977;MQ=63.70;MQ0=2;MQRankSum=2.862;QD=11.64;ReadPosRankSum=1.187;VQSLOD=2.6839;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:54.16:0,54,1247	0/0:6,0:6:18.06:0,18,421	0/0:25,0:15:9.68:0,10,68	0/0:26,0:16:20.15:0,20,322	0/0:16,0:16:36.12:0,36,830	0/0:2,0:2:3.01:0,3,74	0/0:25,0:25:60.09:0,60,1086	0/0:24,0:24:42.47:0,42,779	0/0:15,0:15:33.10:0,33,726	0/0:21,0:21:48.16:0,48,1144	0/0:14,0:14:42.14:0,42,958	0/0:13,0:13:18.06:0,18,442	0/0:20,0:20:57.18:0,57,1310	0/0:17,0:17:48.16:0,48,1102	0/0:24,0:24:51.16:0,51,1179	0/0:20,0:20:45.15:0,45,1064	0/0:12,0:12:26.30:0,26,599	0/0:10,0:10:0.08:0,0,409	0/0:10,0:10:12.04:0,12,295	0/0:8,0:8:15.05:0,15,345	1/1:4,14:18:18.06:300,18,0	0/0:11,0:11:27.09:0,27,616	0/0:20,0:20:33.10:0,33,736	0/0:6,0:6:9.03:0,9,222	0/0:8,0:8:18.06:0,18,428	0/0:22,0:22:57.20:0,57,1345	0/0:12,0:12:30.10:0,30,641	0/0:14,0:14:35.55:0,36,671
chr10	89247315	.	T	TAGAA	525.19	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.312;DP=607;FS=6.992;HRun=0;HaplotypeScore=99.2102;InbreedingCoeff=0.9342;MQ=67.58;MQ0=0;MQRankSum=0.285;QD=35.01;ReadPosRankSum=0.917;VQSLOD=2.9836;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:81.18:0,81,1340	0/0:6,0:6:15.05:0,15,254	0/0:22,0:17:35.37:0,35,427	0/0:17,0:17:9.74:0,10,262	0/0:25,0:25:60.19:0,60,992	0/0:20,0:20:45.15:0,45,749	0/0:18,0:19:51.11:0,51,752	0/0:43,0:43:80.99:0,81,1239	0/0:26,0:26:57.18:0,57,937	0/0:25,0:25:60.18:0,60,940	0/0:10,0:10:24.06:0,24,378	0/0:27,0:27:72.25:0,72,1209	0/0:25,0:25:48.14:0,48,762	0/0:19,0:19:45.15:0,45,752	0/0:34,0:34:90.31:0,90,1520	0/0:24,0:24:63.15:0,63,1030	0/0:25,0:25:63.21:0,63,1053	0/0:24,0:24:66.23:0,66,1088	0/0:27,0:27:57.18:0,57,933	0/0:13,0:13:33.11:0,33,560	1/1:4,10:15:27.05:619,27,0	0/0:13,0:13:33.10:0,33,530	0/0:17,0:16:36.12:0,36,610	0/0:15,0:15:42.10:0,42,681	0/0:11,0:10:30.10:0,30,504	0/0:25,0:25:63.22:0,63,1060	0/0:24,0:24:57.16:0,57,896	0/0:17,0:17:51.17:0,51,849
chr10	89248291	.	G	GGACA	8667.44	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-11.962;DP=949;FS=4.428;HRun=0;HaplotypeScore=169.2173;InbreedingCoeff=0.9863;MQ=59.87;MQ0=1;MQRankSum=-1.857;QD=33.73;ReadPosRankSum=5.654;VQSLOD=4.8084;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,116,1838	0/0:11,0:11:24.08:0,24,392	0/0:23,0:18:15.01:0,15,206	0/0:19,0:15:23.98:0,24,391	1/1:13,19:34:42.14:1003,42,0	0/0:26,0:26:51.17:0,51,813	0/0:38,0:38:66.23:0,66,1062	0/0:35,0:34:60.19:0,60,928	1/1:14,17:31:48.04:1051,48,0	0/0:46,0:46:99:0,102,1578	0/0:18,0:18:42.14:0,42,683	1/1:12,38:50:84.29:2023,84,0	0/0:34,0:35:78.26:0,78,1244	1/1:8,27:35:11.23:1321,11,0	0/0:37,0:37:87.29:0,87,1390	0/0:43,0:42:93.32:0,93,1512	0/0:40,0:40:87.28:0,87,1388	1/1:13,30:43:78.27:1898,78,0	0/0:19,0:16:18.06:0,18,293	0/0:29,0:29:54.18:0,54,875	0/0:71,0:71:99:0,162,2496	1/1:18,14:34:24.08:569,24,0	0/0:23,0:23:48.16:0,48,774	0/0:47,0:47:93.32:0,93,1504	1/1:12,18:30:33.11:803,33,0	0/0:36,0:36:68.96:0,69,1046	0/0:31,0:32:75.25:0,75,1181	0/0:8,0:8:18.04:0,18,269
chr10	89249359	.	TCACACACACACACACACACACACACACA	T	2828.57	PASS	AB=0.682;AC=7;AF=0.125;AN=56;BaseQRankSum=5.532;DP=500;FS=16.184;HRun=0;HaplotypeScore=299.5690;InbreedingCoeff=0.5240;MQ=59.98;MQ0=10;MQRankSum=-4.680;QD=48.77;ReadPosRankSum=1.962;VQSLOD=1.2482;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:36.12:0,36,3096	1/1:4,4:6:3.01:217,3,0	0/0:23,0:8:5.97:0,6,219	0/0:33,0:20:7.50:0,8,780	0/0:11,0:9:3.01:0,3,149	0/0:17,0:17:36.12:0,36,3689	0/0:25,0:25:60.19:0,60,4590	0/0:17,0:16:24.07:0,24,838	0/0:21,0:24:22.32:0,22,1553	0/0:15,0:15:38.87:0,39,3913	0/0:9,0:9:6:0,6,379	0/0:17,0:17:12.04:0,12,1087	0/0:6,0:6:12.04:0,12,962	0/0:28,0:30:34.89:0,35,2776	1/1:5,11:17:30.10:2151,30,0	0/0:27,0:29:42.14:0,42,4588	1/1:10,8:18:9.03:579,9,0	0/0:10,0:10:24.08:0,24,2298	0/1:8,0:14:10.49:10,0,542	0/0:1,0:7:3.01:0,3,46	0/0:32,0:32:48.12:0,48,3785	0/0:18,0:18:27.09:0,27,1981	0/0:11,0:11:6.02:0,6,578	0/0:19,0:26:43.86:0,44,3729	0/0:13,0:13:3.01:0,3,367	0/0:17,0:17:36.12:0,36,3433	0/0:10,0:18:30.10:0,30,686	0/0:3,0:2:6.02:0,6,121
chr10	89249672	.	C	CGT	55.97	PASS	AB=1.000;AC=11;AF=0.688;AN=16;BaseQRankSum=-0.322;DP=598;FS=8.451;HRun=0;HaplotypeScore=61.8303;MQ=33.31;MQ0=212;MQRankSum=-1.517;QD=0.36;ReadPosRankSum=-0.322;VQSLOD=0.2595;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	1/1:10,0:9:6.02:77,6,0	1/1:42,3:22:3.01:43,3,0	./.	./.	1/1:43,0:16:0.94:2,1,0	0/1:13,0:6:0:0,0,0	1/1:21,0:17:2.74:12,3,0	1/1:22,0:16:0.47:1,0,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/0:34,0:18:6:0,6,55	./.	0/0:31,0:15:3:0,3,31	./.	./.
chr10	89249896	.	G	GTGTC	582.02	PASS	AB=1.000;AC=3;AF=0.071;AN=42;BaseQRankSum=-3.206;DP=463;FS=7.599;HRun=0;HaplotypeScore=54.2201;InbreedingCoeff=0.2334;MQ=24.91;MQ0=210;MQRankSum=0.534;QD=8.44;ReadPosRankSum=1.477;VQSLOD=0.9782;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:7,0:2:2.90:0,3,16	0/1:10,0:2:0.93:1,0,17	0/0:11,0:1:3.01:0,3,30	0/0:15,0:9:17.89:0,18,283	0/0:46,0:17:35.70:0,36,520	./.	0/0:16,0:12:22.29:0,22,160	0/0:28,0:9:25.79:0,26,289	0/0:15,0:3:3.01:0,3,59	0/0:16,0:8:23.53:0,24,219	0/0:22,0:10:21.07:0,21,349	0/0:18,0:14:32.98:0,33,320	./.	0/0:19,0:11:16.30:0,16,293	0/0:8,0:2:3:0,3,25	0/0:29,0:18:50.51:0,51,409	./.	./.	1/1:40,15:22:2.25:656,2,0	0/0:15,0:9:14.69:0,15,132	0/0:13,0:2:3.01:0,3,59	0/0:32,0:23:51.58:0,52,752	0/0:13,0:4:8.93:0,9,83	0/0:22,0:9:17.93:0,18,233	./.	0/0:8,0:4:9.03:0,9,157
chr10	89250296	.	C	CGTGT	480.26	PASS	AB=0.947;AC=4;AF=0.167;AN=24;BaseQRankSum=-2.612;DP=336;FS=0.000;HRun=0;HaplotypeScore=52.1357;InbreedingCoeff=0.1373;MQ=24.50;MQ0=167;MQRankSum=-0.039;QD=4.62;ReadPosRankSum=1.576;VQSLOD=1.0879;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	1/1:36,0:1:0.47:1,0,0	0/0:31,0:2:2.15:0,2,47	./.	0/0:7,0:4:3.01:0,3,45	0/0:21,0:14:30.10:0,30,471	./.	./.	0/0:19,0:8:24.08:0,24,379	./.	./.	0/0:11,0:8:5.66:0,6,95	./.	./.	0/0:21,0:16:24.08:0,24,372	./.	./.	./.	./.	0/1:52,4:33:99:549,0,276	./.	0/1:9,0:1:0:0,0,0	0/0:25,0:23:33.05:0,33,485	./.	0/0:20,0:4:1.43:0,1,89	./.	0/0:5,0:3:6.02:0,6,96
chr10	89250339	.	CA	C	1516.72	PASS	AB=0.944;AC=20;AF=0.909;AN=22;BaseQRankSum=-2.453;DP=80;FS=5.780;HRun=1;HaplotypeScore=28.1865;InbreedingCoeff=-0.1580;MQ=82.76;MQ0=4;MQRankSum=-1.655;QD=20.22;ReadPosRankSum=1.974;VQSLOD=3.6750;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:7,1:4:26.29:33,0,26	0/1:14,0:7:30.39:30,0,76	./.	./.	1/1:0,9:9:21.07:292,21,0	./.	./.	1/1:0,4:4:12.02:136,12,0	./.	./.	1/1:0,5:5:6:84,6,0	./.	./.	1/1:1,7:7:15.05:209,15,0	./.	1/1:1,0:1:2.99:24,3,0	./.	./.	1/1:3,11:11:30.07:383,30,0	./.	./.	1/1:0,8:8:17.66:251,18,0	./.	1/1:0,2:2:6.02:83,6,0	./.	1/1:0,2:2:6.02:82,6,0
chr10	89251039	.	C	CGT	265.72	PASS	AB=0.695;AC=1;AF=0.036;AN=28;BaseQRankSum=-3.107;DP=295;FS=5.545;HRun=0;HaplotypeScore=73.1372;InbreedingCoeff=0.1013;MQ=38.17;MQ0=68;MQRankSum=-1.010;QD=6.48;ReadPosRankSum=-0.057;VQSLOD=2.5472;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:13:1.25:0,1,3	./.	0/0:12,0:5:11.10:0,11,108	0/0:20,0:7:18.04:0,18,196	./.	0/0:12,0:9:12.04:0,12,140	0/0:37,0:28:60.01:0,60,677	./.	./.	0/0:12,0:8:15.04:0,15,175	0/0:10,0:7:6.02:0,6,70	./.	0/0:19,0:16:29.75:0,30,308	./.	./.	0/0:14,0:10:15.04:0,15,175	./.	./.	./.	./.	0/1:23,18:32:99:337,0,125	./.	0/0:7,0:6:9.03:0,9,105	0/0:26,0:22:41.96:0,42,469	./.	0/0:18,0:13:15.04:0,15,175	./.	0/0:9,0:6:6:0,6,58
chr10	89251197	.	CACCTGGGGCAA	C	84.06	PASS	AC=2;AF=0.091;AN=22;BaseQRankSum=1.164;DP=376;FS=3.214;HRun=0;HaplotypeScore=21.7366;InbreedingCoeff=0.3696;MQ=12.18;MQ0=279;MQRankSum=0.106;QD=8.41;ReadPosRankSum=-1.482;VQSLOD=0.8129;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:5:6.02:0,6,283	./.	./.	./.	./.	0/0:17,0:4:6.02:0,6,288	0/0:36,0:5:0.89:0,1,2	./.	./.	0/0:12,0:2:6.02:0,6,338	./.	0/0:5,0:2:3.01:0,3,130	0/0:25,0:5:3.01:0,3,169	./.	0/0:19,0:3:0.47:0,0,1	0/0:22,0:4:6.02:0,6,201	./.	./.	./.	./.	./.	./.	./.	0/0:26,0:9:6.02:0,6,229	1/1:5,5:6:6.49:158,6,0	0/0:18,0:4:12.04:0,12,528	./.	./.
chr10	89251403	.	CGT	C	198.97	PASS	AB=0.903;AC=9;AF=0.205;AN=44;BaseQRankSum=2.396;DP=465;FS=0.000;HRun=0;HaplotypeScore=32.8794;InbreedingCoeff=-0.2040;MQ=26.23;MQ0=253;MQRankSum=-0.703;QD=1.39;ReadPosRankSum=-0.093;VQSLOD=1.1324;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,1:4:28.30:28,0,40	0/0:5,0:2:3.01:0,3,30	0/0:1,0:1:2.90:0,3,16	0/0:5,0:2:3.01:0,3,38	0/0:9,0:7:2.99:0,3,46	./.	0/1:28,4:16:99:100,0,334	./.	0/1:9,2:7:53.61:54,0,124	0/1:14,1:4:22.30:22,0,107	0/0:2,0:1:3.01:0,3,46	0/1:16,3:13:37.33:37,0,340	0/1:18,2:4:56.61:57,0,80	0/1:9,1:7:16.27:16,0,213	0/0:34,0:11:11.88:0,12,151	0/0:29,0:9:13.46:0,13,227	0/0:25,0:12:15.02:0,15,159	0/0:16,0:13:36.07:0,36,528	./.	./.	0/0:61,0:10:12:0,12,159	1/1:8,0:3:0.89:2,1,0	0/0:6,0:3:6.02:0,6,93	0/0:28,0:17:45.15:0,45,684	0/0:12,0:4:6.02:0,6,93	0/0:27,0:6:15.03:0,15,203	./.	./.
chr10	89251432	.	G	GTC	101.76	PASS	AB=0.864;AC=4;AF=0.091;AN=44;BaseQRankSum=0.248;DP=482;FS=2.415;HRun=0;HaplotypeScore=36.4541;InbreedingCoeff=0.0473;MQ=26.55;MQ0=212;MQRankSum=-3.040;QD=1.62;ReadPosRankSum=1.911;VQSLOD=1.0380;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:7:6.01:0,6,65	0/1:4,0:3:0:0,0,0	./.	./.	0/0:17,0:8:3.01:0,3,41	./.	0/0:36,1:16:34.89:0,35,405	./.	0/0:11,0:7:15.02:0,15,173	0/0:12,0:4:6.01:0,6,66	0/0:6,0:3:3.01:0,3,41	0/0:17,0:13:23.09:0,23,276	0/0:15,0:5:11.97:0,12,110	0/0:12,0:7:12.03:0,12,147	0/1:14,7:12:42.15:42,0,58	0/0:20,0:11:17.55:0,18,212	0/1:17,12:11:38.04:143,0,38	0/0:18,0:14:33.11:0,33,450	0/0:13,0:1:2.99:0,3,24	0/1:9,0:7:0:0,0,0	0/0:53,0:9:9.03:0,9,123	0/0:17,0:7:3.01:0,3,32	0/0:8,0:6:3.01:0,3,41	0/0:38,0:18:44.99:0,45,550	0/0:17,0:4:5.89:0,6,81	0/0:19,0:6:2.99:0,3,24	./.	./.
chr10	89251581	.	CGT	C	202.66	PASS	AB=0.915;AC=17;AF=0.531;AN=32;BaseQRankSum=3.940;DP=473;FS=0.000;HRun=0;HaplotypeScore=52.0371;InbreedingCoeff=0.0439;MQ=23.42;MQ0=120;MQRankSum=-3.311;QD=0.78;ReadPosRankSum=1.642;VQSLOD=1.3078;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,3:4:3.01:32,3,0	./.	./.	./.	./.	0/1:29,3:11:22.56:23,0,79	./.	1/1:7,0:7:5.68:28,6,0	0/1:20,0:9:15.16:15,0,38	0/0:9,0:3:2.84:0,3,44	./.	0/0:13,0:6:3.44:0,3,20	./.	./.	0/0:24,0:19:21.02:0,21,280	1/1:29,3:18:11.36:109,11,0	1/1:9,0:9:5.68:28,6,0	./.	0/1:7,1:8:19.24:19,0,34	0/1:46,0:16:0:0,0,0	0/1:5,0:2:0:0,0,0	0/0:7,0:4:3.01:0,3,44	0/1:48,6:32:17.02:17,0,161	1/1:6,0:3:5.68:28,6,0	0/1:20,0:11:16.87:17,0,104	./.	./.
chr10	89252640	.	G	GA	1100.49	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-1.424;DP=490;FS=4.986;HRun=9;HaplotypeScore=79.6615;InbreedingCoeff=0.9673;MQ=59.23;MQ0=10;MQRankSum=-0.178;QD=15.95;ReadPosRankSum=-2.295;VQSLOD=3.4556;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:62.91:0,63,532	0/0:8,0:8:24:0,24,208	0/0:15,0:6:13.22:0,13,86	0/0:11,0:5:8.93:0,9,70	0/0:22,0:21:29.72:0,30,260	0/0:15,0:15:41.66:0,42,349	0/0:17,0:16:41.99:0,42,365	1/1:1,12:12:27.06:289,27,0	0/0:15,0:15:32.96:0,33,280	0/0:19,0:19:41.99:0,42,365	0/0:12,0:12:23.98:0,24,208	0/0:25,0:25:56.94:0,57,486	0/0:15,0:15:41.98:0,42,364	0/0:16,0:15:35.96:0,36,308	0/0:20,0:20:41.99:0,42,364	0/0:11,0:11:26.96:0,27,227	0/0:29,1:29:68.97:0,69,595	0/0:22,0:22:44.73:0,45,377	1/1:7,13:19:33.56:366,34,0	1/1:4,10:14:23.97:228,24,0	0/0:11,0:11:32.99:0,33,286	0/0:14,0:14:29.91:0,30,248	0/0:16,0:15:38.99:0,39,338	0/0:24,0:24:62.98:0,63,547	0/0:18,0:18:38.96:0,39,334	0/0:31,0:30:68.96:0,69,596	1/1:4,18:22:17.21:376,17,0	0/0:11,0:10:14.96:0,15,129
chr10	89252658	.	AAAAG	A	4671.02	PASS	AB=0.583;AC=13;AF=0.232;AN=56;BaseQRankSum=6.656;DP=510;FS=6.395;HRun=0;HaplotypeScore=101.0479;InbreedingCoeff=0.8987;MQ=67.51;MQ0=5;MQRankSum=-5.254;QD=39.25;ReadPosRankSum=2.327;VQSLOD=5.0253;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.30:0,87,2173	0/0:10,0:10:30.10:0,30,719	0/0:19,0:10:21.03:0,21,364	0/0:21,0:12:24.15:0,24,338	1/1:2,16:18:42.14:717,42,0	0/0:17,0:17:51.18:0,51,1301	0/0:18,0:18:48.16:0,48,1195	0/0:22,0:21:54.14:0,54,1204	1/1:0,15:15:33.11:603,33,0	0/0:19,0:19:54.19:0,54,1384	0/0:11,0:11:33.10:0,33,816	1/1:3,16:19:42.08:772,42,0	0/0:16,0:16:42.13:0,42,970	1/1:1,17:17:45.15:825,45,0	0/0:19,0:19:42.02:0,42,1087	0/0:12,0:12:36.12:0,36,932	0/0:33,0:32:87.30:0,87,2195	0/1:6,15:20:22.49:618,0,22	0/0:21,0:21:46.37:0,46,1012	0/0:13,0:13:33.07:0,33,713	0/0:11,0:11:30.06:0,30,712	1/1:2,13:15:33.11:589,33,0	0/0:17,0:16:45.15:0,45,1153	0/0:21,0:21:60.20:0,60,1508	1/1:4,9:13:30.10:547,30,0	0/0:25,0:24:60.20:0,60,1474	0/0:25,0:25:66.23:0,66,1633	0/0:11,0:11:33.11:0,33,871
chr10	89253821	.	CTT	C	4924.47	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=3.515;DP=504;FS=1.176;HRun=12;HaplotypeScore=74.2030;InbreedingCoeff=0.9935;MQ=68.38;MQ0=1;MQRankSum=-0.046;QD=23.56;ReadPosRankSum=4.001;VQSLOD=4.8510;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,1:30:32.74:0,33,192	0/0:6,0:7:18.05:0,18,252	0/0:23,0:17:23.46:0,23,269	0/0:19,0:12:13.31:0,13,218	1/1:1,25:26:72.16:732,72,0	0/0:17,0:17:42.13:0,42,604	0/0:14,0:14:39.12:0,39,561	1/1:8,17:25:48.08:488,48,0	1/1:2,9:12:23.77:225,24,0	0/0:17,0:17:45.14:0,45,653	0/0:17,0:18:51.14:0,51,705	1/1:1,20:21:57:579,57,0	0/0:10,0:10:30.09:0,30,428	1/1:0,12:12:27.06:275,27,0	0/0:17,0:17:42.12:0,42,589	0/0:18,0:19:53.64:0,54,729	0/0:29,0:33:92.73:0,93,1255	1/1:2,15:21:55.87:488,56,0	1/1:6,9:15:23.98:228,24,0	1/1:1,19:21:56.85:561,57,0	0/0:9,0:9:27.08:0,27,383	1/1:2,18:20:48.09:488,48,0	0/0:7,0:8:24.07:0,24,339	0/0:22,0:23:53.83:0,54,735	1/1:5,20:24:62.14:616,62,0	0/0:18,0:20:47.62:0,48,620	1/1:1,10:11:24.05:244,24,0	0/0:9,0:11:32.08:0,32,420
chr10	89254138	.	CT	C	2391.28	PASS	AB=0.896;AC=24;AF=0.429;AN=56;BaseQRankSum=5.224;DP=446;FS=11.571;HRun=13;HaplotypeScore=54.2711;InbreedingCoeff=0.7584;MQ=73.86;MQ0=2;MQRankSum=0.647;QD=11.90;ReadPosRankSum=1.526;VQSLOD=2.4432;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:64.44:0,64,723	0/0:6,0:6:15.02:0,15,146	0/0:20,0:15:29.12:0,29,207	0/0:10,0:6:5.78:0,6,35	1/1:2,30:32:83.48:613,83,0	0/0:19,0:19:26.77:0,27,360	0/0:9,0:9:26.99:0,27,242	1/1:14,11:26:34.22:233,34,0	1/1:4,5:9:14.90:109,15,0	0/0:17,0:17:39.06:0,39,378	0/0:19,1:20:14.35:0,14,280	1/1:4,11:15:29.79:219,30,0	0/1:9,1:10:17.99:18,0,146	1/1:3,9:12:0.66:167,1,0	0/0:9,1:10:2.12:0,2,178	0/0:17,1:19:22.99:0,23,366	0/0:32,0:32:50.33:0,50,619	1/1:6,14:20:26.68:269,27,0	1/1:4,15:20:44.22:310,44,0	1/1:1,11:12:29.73:213,30,0	0/0:6,0:6:12.02:0,12,117	1/1:0,4:4:8.94:66,9,0	0/0:8,0:8:18.01:0,18,166	0/1:13,2:15:10.78:11,0,224	1/1:1,12:13:32.81:241,33,0	0/0:19,1:20:13.91:0,14,273	1/1:4,8:13:17.67:133,18,0	0/0:16,0:16:35.41:0,35,324
chr10	89254984	.	A	ATT	3151.58	PASS	AB=0.703;AC=31;AF=0.554;AN=56;BaseQRankSum=7.276;DP=493;FS=13.022;HRun=11;HaplotypeScore=82.4614;InbreedingCoeff=0.6689;MQ=75.09;MQ0=0;MQRankSum=0.998;QD=10.33;ReadPosRankSum=-1.034;VQSLOD=0.4099;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:13:20.46:85,20,0	1/1:2,0:9:12.20:41,12,0	0/0:15,0:12:10.25:0,10,88	0/0:15,0:14:22.29:0,22,186	1/1:4,16:23:38.66:487,39,0	0/0:25,0:25:25.75:0,26,405	0/0:17,0:17:41.92:0,42,384	1/1:11,0:23:21.47:143,21,0	1/1:2,11:15:35.56:463,36,0	0/0:12,0:14:30.75:0,31,259	0/1:18,0:18:37.81:38,0,231	1/1:3,17:20:20.90:295,21,0	0/0:14,0:14:34.95:0,35,283	1/1:5,7:12:6.02:87,6,0	0/1:2,0:13:18.88:49,0,19	0/0:20,0:20:48.05:0,48,459	1/1:4,2:29:50.65:234,51,0	1/1:2,11:15:26.52:313,27,0	1/1:6,0:17:0.73:75,1,0	1/1:5,2:24:3.99:186,4,0	0/1:4,11:17:8.58:182,0,9	1/1:9,3:14:24.72:219,25,0	0/0:16,0:23:4.73:0,5,197	0/0:10,0:11:26.78:0,27,244	1/1:3,8:12:15.48:194,15,0	0/0:22,0:22:5.44:0,5,232	1/1:11,1:30:15.75:268,16,0	0/0:12,0:12:11.12:0,11,243
chr10	89256337	.	C	CA	1215.70	PASS	AB=0.746;AC=7;AF=0.125;AN=56;BaseQRankSum=-3.505;DP=561;FS=3.173;HRun=11;HaplotypeScore=65.7829;InbreedingCoeff=0.5044;MQ=72.52;MQ0=0;MQRankSum=-1.388;QD=12.41;ReadPosRankSum=-3.513;VQSLOD=2.7362;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:37,3:41:64.16:0,64,669	0/0:13,1:15:4.45:0,4,208	0/1:12,0:13:25.37:25,0,39	0/0:10,1:10:3.95:0,4,123	0/0:23,1:25:31.29:0,31,410	0/0:11,0:11:23.88:0,24,186	0/0:18,0:20:42.59:0,43,309	0/1:9,14:23:4.40:311,0,4	0/0:24,1:26:16.29:0,16,300	0/0:18,0:19:46.84:0,47,354	0/0:9,0:10:19.92:0,20,145	0/0:29,0:32:65.55:0,66,481	0/0:13,0:13:29.87:0,30,232	0/0:21,0:21:32.75:0,33,255	0/0:14,0:14:32.83:0,33,255	0/0:16,0:16:35.83:0,36,279	0/0:27,1:28:47.26:0,47,550	0/0:20,0:20:53.78:0,54,418	0/1:9,14:24:15.72:357,0,16	1/1:5,14:19:35.95:335,36,0	0/0:23,0:26:51.84:0,52,383	0/0:16,0:16:35.84:0,36,279	0/0:16,0:17:30.18:0,30,235	0/0:22,0:22:50.76:0,51,390	0/0:16,0:18:48.88:0,49,360	0/0:28,2:30:10.06:0,10,388	1/1:2,17:18:33.06:330,33,0	0/0:12,0:12:32.87:0,33,255
chr10	89256824	.	C	CT	6164.15	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-11.197;DP=744;FS=5.444;HRun=7;HaplotypeScore=69.1739;InbreedingCoeff=0.9999;MQ=82.26;MQ0=0;MQRankSum=1.177;QD=30.22;ReadPosRankSum=0.712;VQSLOD=5.2646;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.12:0,90,862	0/0:12,0:12:33.05:0,33,318	0/0:26,0:26:57.06:0,57,541	0/0:20,0:20:48.03:0,48,450	1/1:3,24:27:69.21:833,69,0	0/0:24,0:24:66.08:0,66,632	0/0:14,0:14:39.04:0,39,370	0/0:34,0:34:61.32:0,61,582	1/1:3,25:28:72.19:855,72,0	0/0:39,0:39:99:0,105,1006	0/0:20,0:20:60.04:0,60,565	1/1:1,32:33:87.22:1035,87,0	0/0:31,0:31:84.09:0,84,795	1/1:4,24:28:66.20:797,66,0	0/0:40,0:40:99:0,111,1072	0/0:39,0:39:99:0,105,998	0/0:31,0:31:78.06:0,78,738	1/1:0,11:11:30.09:362,30,0	0/0:20,0:20:51.08:0,51,493	0/0:36,0:36:93.07:0,93,881	1/1:2,22:24:60.18:725,60,0	1/1:3,27:30:75.23:906,75,0	0/0:32,0:32:87.09:0,87,830	0/0:24,0:24:69.09:0,69,659	1/1:3,20:23:54.17:652,54,0	0/0:27,0:27:75.12:0,75,724	0/0:26,0:26:75.10:0,75,718	0/0:15,0:15:42.07:0,42,406
chr10	89257674	.	C	CAGT	4228.12	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.084;DP=707;FS=0.000;HRun=0;HaplotypeScore=90.9347;InbreedingCoeff=0.9974;MQ=58.41;MQ0=8;MQRankSum=2.938;QD=52.20;ReadPosRankSum=2.348;VQSLOD=6.9323;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.23:0,87,1367	1/1:2,7:9:21.07:470,21,0	0/0:14,0:9:24.08:0,24,388	0/0:26,0:15:27.05:0,27,408	0/0:31,0:31:90.29:0,90,1469	0/0:21,0:21:60.68:0,61,994	0/0:14,0:14:39.12:0,39,624	0/0:34,0:34:90.29:0,90,1452	0/0:21,0:21:57.18:0,57,924	0/0:29,0:29:81.27:0,81,1326	0/0:16,0:16:48.16:0,48,799	0/0:31,0:31:93.32:0,93,1545	0/0:21,0:21:63.22:0,63,1049	0/0:24,0:24:69.24:0,69,1149	1/1:5,34:42:99:2281,102,0	0/0:39,0:39:99:0,114,1846	1/1:2,25:30:66.23:1478,66,0	0/0:29,0:29:78.27:0,78,1290	0/0:17,0:15:39.13:0,39,650	0/0:22,0:22:54.17:0,54,870	0/0:36,0:36:99:0,105,1749	0/0:24,0:24:69.24:0,69,1147	0/0:18,0:18:48.15:0,48,774	0/0:21,0:21:60.21:0,60,999	0/0:19,0:19:57.17:0,57,922	0/0:34,0:34:96.32:0,96,1576	0/0:36,0:36:99:0,99,1644	0/0:18,0:17:54.18:0,54,899
chr10	89258262	.	A	AT	7271.91	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-11.212;DP=623;FS=1.491;HRun=4;HaplotypeScore=58.5507;InbreedingCoeff=0.9812;MQ=69.71;MQ0=0;MQRankSum=-2.756;QD=31.89;ReadPosRankSum=4.475;VQSLOD=5.2678;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:38:93.31:1272,93,0	1/1:0,8:8:21.07:287,21,0	0/0:14,0:14:33.03:0,33,351	0/0:13,0:13:29.43:0,29,291	1/1:3,25:28:69.23:933,69,0	0/0:21,0:21:60.17:0,60,681	0/0:19,0:19:45.11:0,45,500	0/0:32,0:32:90.25:0,90,1013	1/1:0,15:15:33.11:451,33,0	0/0:35,0:35:90.25:0,90,1020	0/0:23,0:23:66.17:0,66,739	1/1:3,23:26:50.69:697,51,0	0/0:16,0:16:5.09:0,5,374	1/1:5,16:21:42.14:568,42,0	1/1:2,33:35:93.31:1272,93,0	0/0:25,0:25:72.19:0,72,807	1/1:2,18:20:42.14:574,42,0	1/1:1,9:10:24.08:328,24,0	0/0:15,0:15:45.13:0,45,509	0/0:29,0:29:81.23:0,81,918	0/0:27,0:27:72.20:0,72,816	1/1:1,13:14:39.13:521,39,0	0/0:19,0:19:50.70:0,51,568	0/0:28,0:28:78.22:0,78,884	1/1:2,11:13:27.09:369,27,0	0/0:30,0:30:81.22:0,81,910	0/0:30,0:29:87.25:0,87,987	0/0:19,0:19:57.16:0,57,646
chr10	89258401	.	ACAAC	A	2269.77	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.651;DP=474;FS=2.869;HRun=0;HaplotypeScore=82.4132;InbreedingCoeff=0.9744;MQ=56.05;MQ0=13;MQRankSum=-0.882;QD=38.47;ReadPosRankSum=4.289;VQSLOD=3.9639;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,2572	0/0:11,0:11:30.10:0,30,804	0/0:21,0:7:21.07:0,21,562	0/0:30,0:14:38.15:0,38,844	1/1:0,9:9:18.06:336,18,0	0/0:16,0:16:48.16:0,48,1232	0/0:15,0:15:45.15:0,45,1232	0/0:24,0:23:69.24:0,69,1855	1/1:1,5:6:18.06:336,18,0	0/0:14,0:14:39.13:0,39,1013	0/0:22,0:22:63.22:0,63,1661	1/1:1,7:7:21.07:392,21,0	0/0:14,0:14:42.14:0,42,1142	1/1:1,9:9:27.09:504,27,0	0/0:20,0:20:57.20:0,57,1513	0/0:18,0:18:54.19:0,54,1479	0/0:27,0:27:69.21:0,69,1800	1/1:4,9:13:21.07:392,21,0	0/0:12,0:12:36.12:0,36,982	0/0:17,0:17:51.15:0,51,1281	0/0:28,0:28:81.20:0,81,2066	1/1:1,8:9:21.07:392,21,0	0/0:18,0:18:51.17:0,51,1320	0/0:15,0:15:42.14:0,42,1150	1/1:1,3:4:6.02:112,6,0	0/0:13,0:13:36.12:0,36,987	0/0:31,0:31:90.30:0,90,2379	0/0:15,0:15:45.15:0,45,1233
chr10	89258464	.	TA	T	1063.44	PASS	AB=0.926;AC=11;AF=0.196;AN=56;BaseQRankSum=3.491;DP=456;FS=0.511;HRun=13;HaplotypeScore=76.5510;InbreedingCoeff=0.8272;MQ=68.13;MQ0=2;MQRankSum=0.746;QD=9.33;ReadPosRankSum=5.530;VQSLOD=3.0350;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:47.68:348,48,0	1/1:2,8:11:20.85:150,21,0	0/1:22,0:14:6.62:7,0,49	0/0:20,0:10:17.05:0,17,112	0/0:12,0:14:26.93:0,27,138	0/0:14,0:14:38.92:0,39,360	0/0:8,0:8:6.01:0,6,58	0/0:36,2:37:59.20:0,59,727	0/0:8,0:9:23.37:0,23,141	0/0:15,0:16:32.88:0,33,303	0/0:13,0:16:41.73:0,42,375	0/0:8,0:10:15.65:0,16,80	0/0:12,0:12:11.18:0,11,253	0/0:10,0:14:26.75:0,27,137	1/1:4,17:21:40.02:304,40,0	0/0:21,0:22:44.86:0,45,406	1/1:7,20:27:23.46:341,23,0	0/0:9,0:17:37.40:0,37,209	0/0:20,1:24:25.78:0,26,365	0/0:17,0:17:29.67:0,30,272	1/1:3,4:7:11.92:88,12,0	0/0:3,0:4:5.52:0,6,25	0/0:15,0:15:27.02:0,27,250	0/0:11,0:11:27.02:0,27,253	0/0:4,0:15:28.46:0,28,148	0/0:12,0:12:24.03:0,24,227	0/0:22,1:23:9.02:0,9,243	0/0:8,0:9:20.83:0,21,172
chr10	89259110	.	G	GTAA	19578.08	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-7.091;DP=635;FS=4.174;HRun=0;HaplotypeScore=83.7187;InbreedingCoeff=0.9997;MQ=81.95;MQ0=0;MQRankSum=-4.395;QD=51.39;ReadPosRankSum=0.509;VQSLOD=7.0158;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:25:54.61:1144,55,0	1/1:2,13:15:36.12:794,36,0	0/0:14,0:14:33.10:0,33,499	0/0:23,0:23:38.03:0,38,641	1/1:2,24:28:72.18:1540,72,0	0/0:27,0:27:81.28:0,81,1298	0/0:16,0:16:39.13:0,39,627	1/1:4,25:30:75.18:1430,75,0	1/1:1,26:28:72.16:1495,72,0	0/0:19,0:19:51.17:0,51,820	0/0:18,0:18:48.16:0,48,768	1/1:7,26:33:78.27:1711,78,0	0/0:25,0:25:75.26:0,75,1205	1/1:3,19:23:54.19:1191,54,0	1/1:3,28:32:75.26:1655,75,0	0/0:26,0:26:75.23:0,75,1158	1/1:0,26:27:69.24:1522,69,0	1/1:4,12:17:30.10:662,30,0	1/1:5,13:18:39.13:843,39,0	1/1:2,28:30:81.17:1692,81,0	1/1:1,18:23:51.18:1125,51,0	1/1:1,9:11:27.09:595,27,0	0/0:25,0:25:69.24:0,69,1108	0/0:19,0:19:57.17:0,57,890	1/1:2,11:13:33.11:727,33,0	0/0:29,0:29:81.27:0,81,1279	1/1:4,23:28:66.23:1453,66,0	0/0:13,0:13:39.13:0,39,626
chr10	89259470	.	G	GATAAAT	7384.76	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.729;DP=556;FS=13.183;HRun=0;HaplotypeScore=120.2266;InbreedingCoeff=0.9910;MQ=84.75;MQ0=0;MQRankSum=-12.529;QD=71.01;ReadPosRankSum=-0.723;VQSLOD=5.0462;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.20:0,57,1306	0/0:9,0:9:27.09:0,27,615	0/0:21,0:21:56.35:0,56,1157	0/0:18,0:18:42.13:0,42,922	1/1:2,21:24:53.97:1427,54,0	0/0:25,0:25:75.22:0,75,1656	0/0:13,0:13:36.12:0,36,849	0/0:28,0:28:81.21:0,81,1630	1/1:2,15:17:33.11:1172,33,0	0/0:23,0:23:69.24:0,69,1631	0/0:18,0:18:54.19:0,54,1239	1/1:3,21:25:66.70:2139,67,0	0/0:6,0:6:15.05:0,15,354	1/1:1,6:9:18.06:639,18,0	0/0:22,0:22:63.22:0,63,1468	0/0:16,0:16:48.16:0,48,1135	0/0:26,0:26:78.27:0,78,1803	1/1:0,6:7:15.05:533,15,0	0/0:25,0:25:72.08:0,72,1215	0/0:32,0:32:84.27:0,84,1916	0/0:34,0:34:90.27:0,90,1983	1/1:0,13:14:32.98:911,33,0	0/0:16,0:16:48.15:0,48,1088	0/0:20,1:21:54.11:0,54,1110	1/1:3,5:8:18.05:564,18,0	0/0:35,0:35:99:0,102,2198	0/0:29,0:29:81.28:0,81,1892	0/0:15,0:15:42.14:0,42,992
chr10	89259558	.	CT	C	591.63	PASS	AB=0.866;AC=9;AF=0.161;AN=56;BaseQRankSum=-1.482;DP=525;FS=22.665;HRun=13;HaplotypeScore=83.3748;InbreedingCoeff=0.5041;MQ=55.41;MQ0=12;MQRankSum=2.397;QD=4.23;ReadPosRankSum=3.182;VQSLOD=0.3801;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:18,11:29:25.84:164,0,26	1/1:1,4:5:11.93:87,12,0	0/0:43,0:13:10.08:0,10,68	0/1:35,1:12:16.94:17,0,23	0/0:15,0:15:15.01:0,15,87	0/0:15,1:15:11.10:0,11,248	0/0:16,0:16:18:0,18,163	0/0:17,0:25:38.70:0,39,235	0/0:7,0:10:17.35:0,17,98	0/0:19,1:21:18.48:0,18,297	0/0:24,0:24:33.49:0,33,311	0/0:12,0:14:24.96:0,25,121	0/0:12,0:12:12:0,12,108	0/0:7,0:7:2.84:0,3,14	1/1:7,12:19:23.77:175,24,0	0/0:21,0:21:33.04:0,33,316	1/1:14,19:32:14.13:291,14,0	0/0:9,0:8:11.35:0,11,79	0/0:16,0:19:20.12:0,20,131	0/0:11,1:17:29.81:0,30,164	0/0:7,0:8:5.78:0,6,32	0/0:8,0:10:13.18:0,13,65	0/0:13,0:14:17.95:0,18,153	0/1:13,1:18:8.36:8,0,106	0/0:11,0:12:11.24:0,11,68	0/0:25,1:25:20.63:0,21,358	0/0:15,0:20:40.25:0,40,229	0/0:11,0:10:15.01:0,15,141
chr10	89259656	.	CTTT	C	1847.05	PASS	AB=0.667;AC=11;AF=0.196;AN=56;BaseQRankSum=2.946;DP=503;FS=16.364;HRun=14;HaplotypeScore=80.1402;InbreedingCoeff=0.8545;MQ=67.76;MQ0=3;MQRankSum=1.073;QD=16.95;ReadPosRankSum=6.438;VQSLOD=0.6221;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:46.30:556,46,0	1/1:3,7:10:17.97:210,18,0	0/0:12,0:9:7.43:0,7,118	0/0:18,0:15:20.18:0,20,268	0/0:17,0:23:60.41:0,60,900	0/0:14,0:20:52.34:0,52,744	0/0:14,0:19:30.07:0,30,435	0/0:12,1:21:22.97:0,23,127	0/0:12,0:15:35.97:0,36,476	0/0:18,0:18:39.03:0,39,547	0/0:17,0:21:57.03:0,57,796	0/0:23,0:25:62.96:0,63,824	0/0:9,0:13:35.03:0,35,391	0/0:9,0:10:24.05:0,24,354	1/1:0,20:20:48.12:561,48,0	0/0:12,0:15:31.32:0,31,493	1/1:10,14:25:46.44:539,46,0	0/0:21,0:22:60.09:0,60,922	0/1:6,0:12:25.16:34,0,25	0/0:6,1:18:16.99:0,17,52	1/1:2,0:12:20.54:125,21,0	0/0:15,0:14:35.53:0,36,484	0/0:8,0:8:18.03:0,18,271	0/0:25,0:30:81.15:0,81,1121	0/0:12,0:14:33.03:0,33,497	0/0:26,0:29:55.32:0,55,773	0/0:6,0:19:16.91:0,17,57	0/0:3,0:4:12.02:0,12,163
chr10	89260317	.	TTA	T	4900.09	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.020;DP=578;FS=8.381;HRun=0;HaplotypeScore=70.5639;InbreedingCoeff=0.9987;MQ=64.81;MQ0=1;MQRankSum=0.628;QD=35.25;ReadPosRankSum=2.685;VQSLOD=7.1337;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1792	0/0:17,0:17:51.16:0,51,902	0/0:17,0:10:25.52:0,26,260	0/0:16,0:11:21.89:0,22,318	1/1:0,35:35:96.23:1321,96,0	0/0:33,0:33:99:0,99,1681	0/0:18,0:18:39.18:0,39,894	0/0:36,0:36:99:0,108,1754	1/1:0,15:15:36.12:514,36,0	0/0:25,0:25:75.23:0,75,1257	0/0:25,0:25:69.72:0,70,1206	1/1:0,22:22:54.18:769,54,0	0/0:10,0:10:30.08:0,30,519	1/1:1,15:16:39.12:540,39,0	0/0:21,0:21:63.08:0,63,1057	0/0:15,0:15:45.11:0,45,745	0/0:26,0:26:72.22:0,72,1284	1/1:0,21:21:51.17:728,51,0	0/0:21,0:19:60.14:0,60,965	0/0:23,0:23:69.10:0,69,1141	0/0:13,0:13:39.04:0,39,365	1/1:0,9:9:27.09:385,27,0	0/0:14,0:14:42.14:0,42,725	0/0:15,0:15:42.13:0,42,748	1/1:0,21:21:45.15:643,45,0	0/0:22,0:22:66.19:0,66,1096	0/0:27,0:27:81.25:0,81,1401	0/0:12,0:12:36.06:0,36,500
chr10	89260522	.	A	AC	3233.06	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-1.847;DP=575;FS=6.947;HRun=6;HaplotypeScore=70.6090;InbreedingCoeff=0.9973;MQ=79.18;MQ0=0;MQRankSum=-1.183;QD=29.13;ReadPosRankSum=3.396;VQSLOD=4.3991;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,117,1185	0/0:7,0:7:18.04:0,18,184	0/0:24,0:24:53.93:0,54,530	0/0:22,0:23:56.62:0,57,527	1/1:0,12:12:33.11:415,33,0	0/0:28,0:28:72.14:0,72,727	0/0:15,0:15:39.08:0,39,398	0/0:21,0:21:45.09:0,45,455	1/1:0,21:21:51.16:642,51,0	0/0:19,0:19:48.11:0,48,490	0/0:12,0:12:33.07:0,33,333	1/1:1,23:24:57.18:717,57,0	0/0:17,0:17:42.08:0,42,428	1/1:1,15:16:45.14:566,45,0	0/0:30,0:30:78.17:0,78,796	0/0:21,0:21:63.14:0,63,643	0/0:34,0:34:78.14:0,78,786	1/1:1,16:17:39.12:491,39,0	0/0:22,0:22:60.13:0,60,612	0/0:13,0:13:30.06:0,30,305	0/0:31,0:31:84.17:0,84,850	1/1:1,8:9:21.07:264,21,0	0/0:15,0:15:42.09:0,42,428	0/0:31,0:31:87.19:0,87,887	1/1:2,10:12:27.09:340,27,0	0/0:21,0:21:54.10:0,54,544	0/0:20,0:20:51.10:0,51,517	0/0:10,0:10:30.02:0,30,285
chr10	89261159	.	AC	A	388.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.161;DP=415;FS=0.000;HRun=3;HaplotypeScore=61.0972;InbreedingCoeff=0.8395;MQ=91.90;MQ0=0;MQRankSum=-2.661;QD=27.77;ReadPosRankSum=-1.233;VQSLOD=2.4285;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:39.12:484,39,0	0/0:5,0:5:15.05:0,15,215	0/0:25,0:24:64.91:0,65,856	0/0:17,0:17:5.58:0,6,446	0/0:15,0:15:45.15:0,45,648	0/0:14,0:14:42.14:0,42,604	0/0:16,0:16:48.16:0,48,690	0/0:31,0:31:93.31:0,93,1340	0/0:10,0:10:30.10:0,30,432	0/0:8,0:8:24.08:0,24,346	0/0:8,0:8:24.08:0,24,346	0/0:14,0:14:39.13:0,39,559	0/0:6,0:6:18.06:0,18,259	0/0:11,0:11:30.10:0,30,430	0/0:20,0:20:60.20:0,60,863	0/0:16,0:16:48.16:0,48,691	0/0:29,0:29:75.22:0,75,1057	0/0:18,0:18:51.17:0,51,729	0/0:24,0:24:63.19:0,63,887	0/0:15,0:15:39.13:0,39,561	0/0:6,0:6:15.05:0,15,216	0/0:11,0:11:33.11:0,33,474	0/0:12,0:12:33.11:0,33,474	0/0:4,0:4:12.04:0,12,173	0/0:14,0:14:39.09:0,39,538	0/0:19,0:19:57.19:0,57,821	0/0:17,0:17:51.14:0,51,697	0/0:16,0:16:39.13:0,39,561
chr10	89261182	.	TAAA	T	1436.96	PASS	AB=0.917;AC=15;AF=0.268;AN=56;BaseQRankSum=2.638;DP=400;FS=15.541;HRun=14;HaplotypeScore=73.0897;InbreedingCoeff=0.7944;MQ=88.60;MQ0=2;MQRankSum=-3.708;QD=17.11;ReadPosRankSum=5.100;VQSLOD=0.7912;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:10:12.04:0,12,182	0/0:3,0:4:9.03:0,9,156	0/0:53,0:29:49.66:0,50,669	0/0:35,0:19:33.40:0,33,392	1/1:8,6:15:14.19:196,14,0	0/0:19,0:19:39.13:0,39,719	0/0:7,0:9:12.04:0,12,199	0/0:13,0:25:51.17:0,51,819	1/1:3,5:8:15.02:175,15,0	0/0:8,0:8:18.05:0,18,309	0/0:5,0:5:12.04:0,12,225	1/1:3,8:11:24.05:280,24,0	0/0:3,0:3:3.01:0,3,40	1/1:4,2:6:8.99:101,9,0	0/0:15,0:16:30.08:0,30,517	0/1:10,1:11:14:14,0,316	0/0:26,0:30:71.89:0,72,1225	1/1:1,15:16:39.11:456,39,0	0/0:7,0:15:30.10:0,30,472	0/0:6,0:15:33.11:0,33,503	0/0:7,0:7:12.04:0,12,199	1/1:3,2:6:5.93:52,6,0	0/0:8,0:8:12.04:0,12,206	0/0:2,0:2:6.02:0,6,113	1/1:0,11:11:30.09:351,30,0	0/0:20,0:21:45.13:0,45,786	0/0:4,0:18:36.12:0,36,543	0/0:11,0:11:30.09:0,30,532
chr10	89261959	.	TCCGCTGAGA	T	19745.13	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=18.561;DP=606;FS=1.025;HRun=0;HaplotypeScore=207.8279;InbreedingCoeff=0.9954;MQ=87.14;MQ0=0;MQRankSum=-18.627;QD=62.48;ReadPosRankSum=1.054;VQSLOD=4.2786;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,34:39:72.24:2064,72,0	1/1:1,9:10:15.05:474,15,0	0/0:25,0:25:66.23:0,66,2613	0/0:29,0:29:81.24:0,81,3127	1/1:3,26:29:42.14:917,42,0	0/0:15,0:15:45.15:0,45,2234	0/0:24,0:24:72.25:0,72,3169	1/1:3,22:25:66.21:1970,66,0	1/1:0,18:18:45.15:1419,45,0	0/0:40,0:40:99:0,114,5036	0/0:18,0:18:54.19:0,54,2425	1/1:1,19:20:60.21:1895,60,0	0/0:20,0:20:60.18:0,60,2662	1/1:4,21:25:54.18:1648,54,0	1/1:0,23:23:54.18:1649,54,0	0/0:31,0:31:90.30:0,90,4090	1/1:2,17:19:48.16:1517,48,0	1/1:1,7:8:18.06:512,18,0	1/1:3,13:16:39.12:1150,39,0	1/1:2,10:12:27.09:508,27,0	1/1:6,15:21:23.99:544,24,0	1/1:2,18:19:48.16:1242,48,0	0/0:19,0:19:57.17:0,57,2408	0/0:37,0:37:99:0,111,5387	1/1:2,11:13:24.55:720,25,0	0/0:25,0:25:75.26:0,75,3610	1/1:0,18:18:51.17:1516,51,0	0/0:7,0:7:21.07:0,21,951
chr10	89262600	.	TACACACACACACACACAC	T	3096.96	PASS	AB=0.793;AC=15;AF=0.278;AN=54;BaseQRankSum=1.010;DP=474;FS=3.483;HRun=0;HaplotypeScore=197.4583;InbreedingCoeff=0.6288;MQ=67.95;MQ0=8;MQRankSum=-3.235;QD=20.65;ReadPosRankSum=2.233;VQSLOD=2.8117;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:16:19.50:0,20,288	0/1:6,0:7:29.47:29,0,30	0/0:25,0:16:3.01:0,3,62	0/0:36,0:22:12.03:0,12,212	1/1:15,0:14:23.56:418,24,0	0/0:14,0:13:24.08:0,24,1645	0/0:16,0:28:27.09:0,27,894	0/0:16,0:16:18.05:0,18,425	1/1:4,13:17:12.04:537,12,0	0/0:18,0:18:33.11:0,33,1921	0/0:12,0:12:21.06:0,21,1055	1/1:16,2:18:10.04:885,10,0	0/0:10,0:10:21.54:0,22,1300	1/1:4,19:24:8.62:315,9,0	0/1:20,0:23:99:105,0,202	0/0:12,0:12:20.13:0,20,1224	0/0:20,0:18:12.72:0,13,196	0/1:5,8:13:67.80:140,0,68	0/0:15,0:17:27.09:0,27,1390	0/0:12,0:12:20.25:0,20,807	1/1:21,0:20:20.86:605,21,0	./.	0/0:11,0:11:17.31:0,17,1029	0/0:15,0:21:54.19:0,54,3518	1/1:1,11:12:6.02:243,6,0	0/0:15,0:15:30.09:0,30,1322	0/0:6,0:13:21.54:0,22,877	0/0:6,0:7:18.06:0,18,566
chr10	89262628	.	C	CTT	833.16	PASS	AB=0.897;AC=7;AF=0.125;AN=56;BaseQRankSum=6.023;DP=586;FS=6.330;HRun=0;HaplotypeScore=111.4660;InbreedingCoeff=-0.0186;MQ=50.45;MQ0=17;MQRankSum=-0.455;QD=6.31;ReadPosRankSum=0.261;VQSLOD=2.5242;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:31.64:0,32,385	0/1:7,0:8:11.84:12,0,97	0/0:20,0:5:5.74:0,6,84	0/0:27,0:7:14.91:0,15,194	0/1:18,3:19:99:191,0,111	0/0:22,0:21:51.17:0,51,786	0/0:32,0:31:51.11:0,51,662	0/0:15,0:13:35.14:0,35,458	0/1:19,0:19:40.58:41,0,163	0/0:20,0:20:60.20:0,60,900	0/0:19,0:18:36.11:0,36,537	0/1:14,5:19:95.81:353,0,96	0/0:14,0:13:33.02:0,33,480	0/0:28,0:28:9.45:0,9,291	0/0:26,0:26:15.88:0,16,320	0/0:18,0:17:38.47:0,38,608	0/0:31,0:29:42.13:0,42,472	0/1:16,0:16:34.35:34,0,182	0/0:19,0:18:42.98:0,43,554	0/0:17,0:16:32.07:0,32,334	0/1:22,13:34:99:276,0,602	0/0:17,0:17:15.02:0,15,188	0/0:20,0:19:42.11:0,42,653	0/0:30,0:30:75.19:0,75,1072	0/1:13,0:13:0.27:56,0,0	0/0:25,0:25:69.23:0,69,1042	0/0:17,0:17:29.76:0,30,389	0/0:10,0:10:27.05:0,27,370
chr10	89262630	.	C	CTCTT	1484.49	PASS	AB=0.907;AC=8;AF=0.143;AN=56;BaseQRankSum=3.590;DP=595;FS=40.038;HRun=0;HaplotypeScore=123.2606;InbreedingCoeff=0.0164;MQ=50.42;MQ0=16;MQRankSum=-1.439;QD=9.96;ReadPosRankSum=-2.159;VQSLOD=1.2287;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:26:99:120,0,156	0/1:4,2:8:46.95:141,0,47	0/0:21,0:5:5.70:0,6,82	0/0:29,0:7:11.51:0,12,182	0/1:21,0:19:25.18:25,0,213	0/0:22,0:21:51.05:0,51,1046	0/0:31,0:30:51.63:0,52,888	0/0:16,0:14:34.91:0,35,535	0/0:19,0:19:23.74:0,24,337	0/0:20,0:20:60.20:0,60,1183	0/0:19,0:18:39.48:0,39,769	0/1:19,0:19:27.33:27,0,290	0/0:14,0:13:33.11:0,33,640	0/0:28,0:28:26.76:0,27,454	1/1:22,4:26:2.41:803,2,0	0/0:18,0:17:38.17:0,38,808	0/1:22,9:29:99:461,0,321	0/1:17,0:17:38.56:39,0,336	0/0:19,0:19:45.57:0,46,718	0/0:17,0:16:32.20:0,32,469	0/0:38,0:36:43.46:0,43,959	0/0:17,0:17:18.06:0,18,331	0/0:20,0:19:39.13:0,39,808	0/0:32,0:32:75.21:0,75,1403	0/0:14,0:14:8.74:0,9,65	0/0:25,0:25:69.24:0,69,1392	0/0:17,0:17:28.44:0,28,512	0/0:10,0:10:27.07:0,27,515
chr10	89262648	.	T	TAC	1168.96	PASS	AB=0.571;AC=7;AF=0.125;AN=56;BaseQRankSum=-2.262;DP=598;FS=24.747;HRun=0;HaplotypeScore=98.7629;InbreedingCoeff=0.8215;MQ=57.89;MQ0=13;MQRankSum=-0.871;QD=16.70;ReadPosRankSum=-0.292;VQSLOD=1.8197;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:6,18:24:9.81:363,0,10	1/1:1,2:3:9.03:130,9,0	0/0:36,0:15:24.25:0,24,377	0/0:31,0:14:23.44:0,23,271	0/0:10,0:10:20.85:0,21,215	0/0:22,0:22:51.14:0,51,627	0/0:33,0:32:54.11:0,54,642	0/0:25,0:23:42.13:0,42,517	0/0:22,0:22:36.11:0,36,440	0/0:19,0:19:24.05:0,24,280	0/0:17,0:16:26.88:0,27,309	0/0:11,0:11:30.01:0,30,332	0/0:9,0:10:14.71:0,15,157	0/0:30,0:30:41.95:0,42,475	1/1:1,17:18:27.09:432,27,0	0/0:18,0:17:36.11:0,36,443	1/1:4,18:24:24.08:387,24,0	0/0:21,0:21:24.21:0,24,460	0/0:19,0:19:33.10:0,33,405	0/0:15,0:14:27.02:0,27,318	0/0:41,0:40:99:0,105,1246	0/0:19,0:19:30.05:0,30,350	0/0:19,0:18:36.10:0,36,443	0/0:33,0:33:63.15:0,63,756	0/0:19,0:19:24.03:0,24,276	0/0:27,0:27:39.12:0,39,480	0/0:18,0:18:26.55:0,27,332	0/0:10,0:10:21.07:0,21,259
chr10	89262844	.	T	TA	4847.17	PASS	AB=0.866;AC=26;AF=0.464;AN=56;BaseQRankSum=-9.226;DP=570;FS=3.692;HRun=11;HaplotypeScore=63.5788;InbreedingCoeff=0.7211;MQ=76.11;MQ0=0;MQRankSum=0.489;QD=16.05;ReadPosRankSum=3.267;VQSLOD=5.7610;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,39:47:63.76:806,64,0	1/1:2,9:11:3.82:220,4,0	0/1:25,0:25:24.90:25,0,204	0/0:15,0:14:22.92:0,23,165	1/1:5,18:23:27.83:453,28,0	0/0:14,0:14:14.83:0,15,214	0/0:22,0:22:52.81:0,53,398	0/0:31,1:32:53.18:0,53,590	1/1:4,9:14:9.67:265,10,0	0/0:25,0:29:69.64:0,70,505	0/0:15,0:15:32.73:0,33,248	1/1:3,14:17:27.05:274,27,0	0/1:10,1:11:0.56:1,0,177	1/1:10,16:26:12.88:311,13,0	1/1:5,21:26:54.10:543,54,0	0/0:20,0:21:53.47:0,53,406	1/1:5,22:27:54.11:548,54,0	0/1:5,8:13:36.62:211,0,37	0/0:28,0:28:34.84:0,35,404	0/1:12,1:13:6.71:7,0,130	1/1:2,8:10:18.04:183,18,0	1/1:2,17:20:53.88:519,54,0	0/0:17,0:17:38.66:0,39,291	0/0:24,0:24:45.22:0,45,464	1/1:1,18:19:48.09:482,48,0	0/0:31,0:31:71.18:0,71,543	0/0:9,0:9:23.86:0,24,180	0/0:10,0:10:23.87:0,24,181
chr10	89263478	.	A	AG	156.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.424;DP=488;FS=21.785;HRun=0;HaplotypeScore=60.0967;InbreedingCoeff=0.9556;MQ=70.09;MQ0=4;MQRankSum=-4.362;QD=17.34;ReadPosRankSum=-0.209;VQSLOD=3.1136;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:46:99:0,129,1784	0/0:11,0:11:33.11:0,33,461	0/0:14,0:12:33:0,33,431	0/0:14,0:10:27.53:0,28,339	0/0:23,0:23:63.20:0,63,865	0/0:11,0:11:30.08:0,30,402	0/0:23,0:21:63.19:0,63,854	0/0:26,0:24:69.19:0,69,924	0/0:8,0:8:24.08:0,24,335	0/0:13,0:13:36.12:0,36,489	0/0:21,0:20:51.17:0,51,714	0/0:22,0:22:63.21:0,63,875	0/0:8,0:8:24.08:0,24,335	0/0:11,0:11:29.09:0,29,417	0/0:17,0:17:51.11:0,51,674	0/0:14,0:14:39.13:0,39,546	0/0:35,0:34:99:0,102,1400	0/0:24,0:23:63.21:0,63,874	0/0:15,0:15:39.08:0,39,507	0/0:16,0:16:42.10:0,42,557	1/1:2,7:7:18.06:247,18,0	0/0:17,0:17:42.12:0,42,575	0/0:12,0:12:36.12:0,36,502	0/0:17,0:17:51.17:0,51,710	0/0:13,0:13:39.13:0,39,545	0/0:22,0:22:63.21:0,63,880	0/0:19,0:19:57.15:0,57,772	0/0:5,0:4:12.04:0,12,168
chr10	89264101	.	ACT	A	3627.16	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=16.295;DP=619;FS=1.605;HRun=0;HaplotypeScore=101.6492;InbreedingCoeff=0.9963;MQ=81.72;MQ0=0;MQRankSum=-3.875;QD=25.36;ReadPosRankSum=1.643;VQSLOD=4.4869;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,2419	0/0:12,0:12:36.12:0,36,716	0/0:15,0:15:45.15:0,45,821	0/0:20,0:20:45.77:0,46,831	1/1:3,18:21:40.87:409,41,0	0/0:24,0:24:72.23:0,72,1412	0/0:21,0:21:63.20:0,63,1243	0/0:35,0:35:99:0,102,1986	1/1:5,30:35:95.93:928,96,0	0/0:29,0:29:84.25:0,84,1611	0/0:11,0:11:33.10:0,33,625	1/1:2,21:23:68.52:721,69,0	0/0:28,0:28:84.27:0,84,1670	1/1:2,19:21:57.46:532,57,0	0/0:26,0:26:78.25:0,78,1535	0/0:32,0:31:96.32:0,96,1891	0/0:15,0:15:45.12:0,45,840	1/1:5,10:15:28.11:320,28,0	0/0:22,0:22:66.23:0,66,1323	0/0:19,0:19:54.19:0,54,1095	0/0:36,0:36:99:0,102,1949	1/1:0,11:11:26.97:244,27,0	0/0:9,0:9:24.06:0,24,448	0/0:29,0:29:87.30:0,87,1724	1/1:5,12:17:49.80:473,50,0	0/0:21,0:21:63.20:0,63,1204	0/0:25,0:25:75.26:0,75,1504	0/0:5,0:5:15.05:0,15,291
chr10	89264104	.	GCA	G	3660.32	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=16.603;DP=618;FS=2.634;HRun=0;HaplotypeScore=100.6635;InbreedingCoeff=0.9961;MQ=83.57;MQ0=0;MQRankSum=-5.285;QD=26.91;ReadPosRankSum=2.836;VQSLOD=4.5102;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,2460	0/0:14,0:14:42.14:0,42,853	0/0:16,0:16:48.16:0,48,921	0/0:22,0:22:57.19:0,57,1122	1/1:2,18:20:39.05:406,39,0	0/0:25,0:25:75.26:0,75,1522	0/0:21,0:21:63.22:0,63,1268	0/0:35,0:35:99:0,102,2073	1/1:0,32:32:91.90:906,92,0	0/0:29,0:29:87.29:0,87,1720	0/0:11,0:11:33.11:0,33,671	1/1:2,21:23:68.53:726,69,0	0/0:28,0:28:84.29:0,84,1707	1/1:2,19:21:58.66:582,59,0	0/0:28,0:28:84.29:0,84,1706	0/0:31,0:30:93.31:0,93,1853	0/0:15,0:15:45.15:0,45,914	1/1:2,10:12:23.59:294,24,0	0/0:22,0:22:66.20:0,66,1260	0/0:20,0:20:57.20:0,57,1158	0/0:34,0:34:99:0,102,2073	1/1:0,11:11:26.93:251,27,0	0/0:9,0:9:24.08:0,24,486	0/0:28,0:28:84.27:0,84,1656	1/1:5,12:17:49.82:496,50,0	0/0:21,0:21:63.22:0,63,1280	0/0:26,0:26:78.27:0,78,1582	0/0:5,0:5:15.05:0,15,305
chr10	89264846	.	C	CAA	1436.10	PASS	AB=0.831;AC=10;AF=0.238;AN=42;BaseQRankSum=4.117;DP=491;FS=2.235;HRun=12;HaplotypeScore=85.3046;InbreedingCoeff=0.7023;MQ=59.11;MQ0=6;MQRankSum=-0.332;QD=10.26;ReadPosRankSum=-2.489;VQSLOD=1.8341;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:34:71.58:0,72,685	1/1:1,7:8:11.99:146,12,0	0/1:20,0:8:6.97:7,0,90	0/0:24,0:6:5.99:0,6,54	./.	0/0:20,0:20:54.04:0,54,494	0/0:21,0:21:44.93:0,45,411	0/1:25,0:43:76.28:143,0,76	./.	0/0:23,0:26:59.09:0,59,504	0/0:26,0:28:52.14:0,52,523	./.	0/0:16,0:16:26.89:0,27,249	./.	1/1:4,12:16:27.02:354,27,0	0/0:24,0:24:47.87:0,48,444	1/1:4,27:36:70.66:850,71,0	./.	0/0:18,0:19:37.52:0,38,308	0/0:16,0:16:35.64:0,36,361	1/1:2,0:15:7.91:85,8,0	./.	0/0:21,0:25:31.64:0,32,361	0/0:17,0:18:44.70:0,45,400	./.	0/0:43,0:44:99:0,105,955	0/0:23,0:23:28.89:0,29,464	0/0:8,0:9:23.75:0,24,206
chr10	89265201	.	AAGG	A	1553.37	PASS	AB=0.690;AC=6;AF=0.107;AN=56;BaseQRankSum=3.481;DP=729;FS=17.761;HRun=0;HaplotypeScore=229.2984;InbreedingCoeff=0.6073;MQ=51.40;MQ0=2;MQRankSum=-3.330;QD=20.71;ReadPosRankSum=-0.182;VQSLOD=1.6815;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,117,2231	0/0:4,0:4:9.03:0,9,185	0/0:22,0:18:41.81:0,42,767	0/0:30,0:26:42.07:0,42,1130	0/0:28,0:28:55.33:0,55,917	0/0:25,0:25:54.12:0,54,1060	0/0:26,0:26:69.24:0,69,1375	0/1:9,8:15:18.77:231,0,19	0/0:31,0:31:87.68:0,88,1577	0/0:36,0:35:84.29:0,84,1690	0/0:22,0:22:57.18:0,57,1154	0/0:27,0:27:47.96:0,48,791	0/0:24,0:24:54.11:0,54,1017	0/0:24,0:24:51.08:0,51,883	0/0:39,0:39:99:0,99,1970	0/0:25,0:25:60.19:0,60,1188	0/0:26,0:26:66.23:0,66,1340	0/0:24,0:24:43.43:0,43,1149	0/1:8,6:14:99:217,0,123	1/1:4,13:16:26.96:324,27,0	0/0:41,0:40:80.08:0,80,1628	0/0:20,0:20:35.72:0,36,616	0/0:29,0:29:81.28:0,81,1690	0/0:37,0:37:83.91:0,84,1479	0/0:19,0:19:51.09:0,51,883	0/0:39,0:39:90.31:0,90,1799	1/1:2,25:27:69.06:917,69,0	0/0:4,0:4:12.04:0,12,254
chr10	89265233	.	A	AGAG	2950.38	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=13.188;DP=721;FS=2.282;HRun=0;HaplotypeScore=325.4858;InbreedingCoeff=0.2254;MQ=45.61;MQ0=4;MQRankSum=-7.041;QD=11.01;ReadPosRankSum=-1.081;VQSLOD=2.3440;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:68.51:0,69,1132	0/1:7,0:7:10.11:10,0,167	0/0:37,0:16:24.45:0,24,259	0/0:46,0:24:20.20:0,20,453	0/1:30,0:29:32.94:502,0,33	0/0:22,0:22:25.71:0,26,401	0/0:32,0:32:52.96:0,53,811	0/0:21,0:19:24.26:0,24,349	1/1:29,0:29:6.98:720,7,0	0/0:34,0:33:31.77:0,32,780	0/0:28,0:28:49.35:0,49,728	1/1:14,6:21:28.49:412,28,0	0/0:15,0:15:35.21:0,35,442	0/1:17,0:17:10.89:464,0,11	0/1:39,0:39:11.54:12,0,926	0/1:31,0:31:69.17:69,0,758	0/0:19,0:19:27.63:0,28,613	1/1:16,0:16:20.88:224,21,0	0/0:13,0:11:33.09:0,33,444	0/0:17,0:17:43.71:0,44,628	0/1:29,0:28:41.46:41,0,573	0/1:30,0:30:99:457,0,116	0/0:29,0:29:20.18:0,20,820	0/0:23,0:23:45.57:0,46,514	0/1:19,0:19:99:207,0,164	0/0:40,0:40:69.70:0,70,1120	0/0:34,0:34:76.07:0,76,1057	0/0:4,0:4:8.99:0,9,93
chr10	89265237	.	G	GAGA	2290.29	PASS	AB=0.980;AC=11;AF=0.196;AN=56;BaseQRankSum=11.630;DP=715;FS=11.467;HRun=0;HaplotypeScore=322.7262;InbreedingCoeff=-0.0667;MQ=44.85;MQ0=4;MQRankSum=-8.745;QD=9.02;ReadPosRankSum=2.539;VQSLOD=1.7757;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:75.25:0,75,1443	0/0:7,0:7:3.35:0,3,221	0/0:39,0:15:29.82:0,30,424	0/0:48,0:23:46.99:0,47,731	0/1:32,0:31:99:388,0,146	0/0:21,0:21:61.92:0,62,672	0/0:31,0:32:71.45:0,71,1053	0/0:20,0:18:46.61:0,47,616	0/1:25,2:27:99:540,0,132	0/0:33,0:32:61.90:0,62,1166	0/0:26,0:26:65.07:0,65,988	0/1:19,1:20:38.09:332,0,38	0/0:14,0:14:39.12:0,39,601	0/1:17,0:17:75.16:367,0,75	0/1:39,0:39:83.13:83,0,1194	0/1:34,1:35:13.61:14,0,1052	0/1:20,0:20:8.17:8,0,692	1/1:15,0:15:5.72:78,6,0	0/0:16,0:14:39.11:0,39,608	0/0:17,0:17:45.56:0,46,718	0/0:30,0:29:15.39:0,15,690	0/1:29,1:30:99:389,0,296	0/0:27,0:27:59.57:0,60,1095	0/0:20,0:20:52.29:0,52,772	0/1:19,0:19:99:238,0,320	0/0:38,0:38:97.14:0,97,1435	0/0:30,0:30:84.25:0,84,1328	0/0:4,0:4:11.97:0,12,155
chr10	89265243	.	A	AGAAGG	2765.09	PASS	AB=0.787;AC=7;AF=0.125;AN=56;BaseQRankSum=9.171;DP=691;FS=11.062;HRun=0;HaplotypeScore=341.9793;InbreedingCoeff=-0.1514;MQ=43.83;MQ0=5;MQRankSum=-8.303;QD=18.43;ReadPosRankSum=3.734;VQSLOD=1.8693;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:98.65:0,99,2040	0/0:7,0:7:12.66:0,13,358	0/0:38,0:13:28.17:0,28,525	0/0:44,0:18:37.86:0,38,746	0/1:23,9:31:99:410,0,301	0/0:18,0:18:46.34:0,46,739	0/0:30,0:30:59.72:0,60,1466	0/0:19,0:17:44.70:0,45,849	0/1:18,6:24:99:667,0,199	0/0:31,0:32:67.92:0,68,1562	0/0:26,0:26:47.70:0,48,1262	0/1:13,5:19:99:394,0,165	0/0:14,0:14:40.33:0,40,832	0/1:8,8:16:99:612,0,123	0/0:39,0:39:99:0,102,1846	0/0:34,1:35:5.28:0,5,1549	0/0:22,0:22:16.96:0,17,1024	0/1:10,2:12:96.02:134,0,96	0/0:16,0:15:45.15:0,45,921	0/0:18,0:18:47.99:0,48,1009	0/0:29,0:28:48.16:0,48,1031	0/1:20,8:28:99:514,0,429	0/0:25,0:25:62.91:0,63,1429	0/0:21,0:21:36.62:0,37,964	0/1:16,2:19:99:164,0,354	0/0:37,0:37:98.56:0,99,1919	0/0:29,0:29:84.28:0,84,1878	0/0:4,0:4:11.71:0,12,220
chr10	89265256	.	G	GGAA	2579.53	PASS	AB=0.944;AC=17;AF=0.304;AN=56;BaseQRankSum=13.508;DP=612;FS=8.826;HRun=0;HaplotypeScore=293.5996;InbreedingCoeff=0.0160;MQ=41.53;MQ0=6;MQRankSum=-5.902;QD=7.79;ReadPosRankSum=2.162;VQSLOD=1.4544;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:47.50:0,48,475	0/0:8,0:8:3.74:0,4,102	0/0:28,0:7:2.08:0,2,39	0/1:35,0:9:21.24:21,0,22	0/1:26,4:29:72.60:294,0,73	0/1:17,0:17:34.57:35,0,132	0/0:31,0:31:33.75:0,34,384	0/0:21,0:20:19.49:0,19,281	1/1:20,1:21:7.48:489,7,0	0/1:28,0:28:28.93:29,0,306	0/1:23,0:23:2.53:3,0,238	1/1:14,2:16:21.05:406,21,0	0/0:13,0:13:26.04:0,26,176	0/1:11,6:17:10.93:514,0,11	0/1:29,0:29:47.49:47,0,279	0/1:30,0:30:99:126,0,358	0/0:21,0:20:21.53:0,22,134	1/1:7,0:7:8.83:56,9,0	0/0:11,0:10:18.66:0,19,160	0/0:14,0:14:30.48:0,30,219	0/0:31,0:30:12.01:0,12,211	0/1:19,6:25:99:436,0,138	0/0:19,0:19:35.93:0,36,322	0/0:16,0:16:8.29:0,8,213	0/1:21,1:22:99:282,0,110	0/1:31,0:30:8.53:9,0,359	0/0:28,0:28:49.50:0,50,464	0/0:4,0:4:5.90:0,6,42
chr10	89266673	.	GT	G	3050.17	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=3.341;DP=468;FS=7.793;HRun=1;HaplotypeScore=79.3633;InbreedingCoeff=0.9654;MQ=72.73;MQ0=5;MQRankSum=-1.465;QD=30.81;ReadPosRankSum=3.432;VQSLOD=2.8695;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:40:99:0,105,1651	0/0:7,0:7:18.06:0,18,287	0/0:23,0:22:66.21:0,66,1007	0/0:16,0:15:42.14:0,42,604	1/1:0,15:15:42.07:524,42,0	0/0:21,0:21:63.18:0,63,939	0/0:24,0:23:69.24:0,69,1103	0/0:20,0:20:50.38:0,50,558	1/1:0,13:13:33.11:426,33,0	0/0:16,0:16:42.14:0,42,661	0/0:16,0:16:48.16:0,48,736	1/1:1,19:20:54.18:700,54,0	0/0:15,0:15:45.15:0,45,708	1/1:0,14:14:36.12:464,36,0	0/0:12,0:11:33.11:0,33,528	0/0:11,0:11:33.11:0,33,507	0/0:20,0:20:57.19:0,57,895	1/1:1,18:19:42.14:545,42,0	0/0:16,0:16:45.01:0,45,573	0/0:25,0:25:68.04:0,68,918	0/0:17,0:17:45.15:0,45,692	1/1:0,6:6:18.06:236,18,0	0/0:16,0:16:48.15:0,48,744	0/0:20,0:20:60.20:0,60,930	1/1:0,12:10:27.09:351,27,0	0/0:19,0:19:57.17:0,57,847	0/0:12,0:12:33:0,33,430	0/0:1,0:1:3.01:0,3,48
chr10	89266676	.	T	TG	2811.79	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-9.078;DP=472;FS=9.200;HRun=6;HaplotypeScore=81.2164;InbreedingCoeff=0.7475;MQ=73.56;MQ0=5;MQRankSum=-2.488;QD=13.99;ReadPosRankSum=2.351;VQSLOD=2.4569;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,36:42:93.28:1151,93,0	1/1:1,6:7:15.05:189,15,0	0/0:22,0:21:56.94:0,57,542	0/0:17,0:16:44.73:0,45,423	0/1:16,0:16:2.46:2,0,3	0/0:18,0:18:54.12:0,54,550	0/0:24,0:23:62.97:0,63,626	0/0:20,0:20:33.16:0,33,189	1/1:14,0:14:8.08:58,8,0	0/0:15,0:15:38.99:0,39,378	0/0:17,0:17:48.09:0,48,482	1/1:19,0:19:3.45:30,3,0	0/0:16,0:16:42.09:0,42,428	1/1:14,0:14:1.89:7,2,0	1/1:1,11:11:30.10:377,30,0	0/0:11,0:11:30.07:0,30,306	1/1:1,19:20:51.16:641,51,0	1/1:18,0:18:3.24:21,3,0	0/0:16,0:16:39.24:0,39,222	0/0:26,0:26:58.29:0,58,370	1/1:2,15:17:39.12:490,39,0	0/1:7,0:7:8.53:33,0,9	0/0:17,0:17:42.09:0,42,428	0/0:20,0:20:57.13:0,57,581	0/1:13,0:11:0.75:2,0,1	0/0:20,0:20:60.11:0,60,600	0/0:11,0:11:29.16:0,29,168	0/0:1,0:1:3.01:0,3,31
chr10	89266875	.	A	AG	5069	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-14.274;DP=631;FS=11.807;HRun=6;HaplotypeScore=65.5421;InbreedingCoeff=0.9846;MQ=84.46;MQ0=0;MQRankSum=-2.533;QD=32.92;ReadPosRankSum=0.945;VQSLOD=4.3034;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,51:56:99:1772,141,0	1/1:0,11:11:33.11:413,33,0	0/0:15,0:15:35.75:0,36,343	0/0:24,0:24:53.69:0,54,496	0/0:28,0:28:75.15:0,75,758	0/0:16,0:16:45.10:0,45,458	0/0:24,0:24:63.13:0,63,636	0/0:26,0:26:69.15:0,69,704	0/0:20,0:20:54.12:0,54,551	0/0:27,0:27:78.17:0,78,792	0/0:26,0:26:62.71:0,63,636	0/0:27,0:27:78.16:0,78,789	0/0:19,0:19:57.12:0,57,575	0/0:22,0:22:60.11:0,60,599	1/1:3,33:36:93.30:1166,93,0	0/0:23,0:23:57.12:0,57,582	1/1:1,26:27:72.23:905,72,0	0/0:29,0:29:75.14:0,75,758	0/0:17,0:17:45.10:0,45,459	0/0:15,0:15:45.10:0,45,459	1/1:2,22:24:66.18:813,66,0	0/0:18,0:18:54.12:0,54,551	0/0:6,0:6:9.02:0,9,92	0/0:26,0:26:72.16:0,72,734	0/0:16,0:16:39.09:0,39,398	0/0:20,0:20:60.14:0,60,612	0/0:27,0:27:72.16:0,72,734	0/0:6,0:6:18.04:0,18,184
chr10	89267365	.	AT	A	1721.76	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=11.919;DP=515;FS=10.828;HRun=2;HaplotypeScore=129.1150;InbreedingCoeff=0.8857;MQ=56.71;MQ0=26;MQRankSum=-8.025;QD=10.25;ReadPosRankSum=0.617;VQSLOD=0.6747;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:52.97:0,53,461	0/0:2,0:2:6:0,6,52	0/0:34,0:7:11.05:0,11,131	0/0:30,0:12:5.32:0,5,85	1/1:14,11:25:37.54:198,38,0	0/0:11,0:11:33.04:0,33,339	0/0:12,0:12:30.01:0,30,269	0/0:30,0:27:77.84:0,78,672	1/1:31,0:30:80.94:498,81,0	0/0:15,0:13:33.02:0,33,306	0/0:7,0:7:18.01:0,18,162	1/1:22,0:21:43.45:257,43,0	0/0:13,0:12:29.95:0,30,292	1/1:21,1:21:44.85:229,45,0	0/0:11,0:11:30:0,30,262	0/0:10,0:10:30.02:0,30,275	0/0:17,0:17:39.46:0,39,347	1/1:12,0:10:21.61:121,22,0	0/0:21,0:20:56.53:0,57,457	0/0:30,0:30:77.62:0,78,645	0/0:11,0:10:26.87:0,27,209	1/1:27,0:26:45.63:295,46,0	0/1:7,0:5:4.03:4,0,66	0/0:10,0:9:27.01:0,27,245	1/1:22,0:21:52.73:317,53,0	0/0:14,0:14:42.03:0,42,384	0/0:27,0:25:60.95:0,61,556	0/0:19,0:13:17.17:0,17,161
chr10	89267375	.	A	AC	2268.15	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.274;DP=642;FS=7.407;HRun=0;HaplotypeScore=153.7659;InbreedingCoeff=0.9443;MQ=46.77;MQ0=49;MQRankSum=-9.381;QD=13.50;ReadPosRankSum=2.911;VQSLOD=4.8577;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:46.21:0,46,390	0/0:5,0:4:11.24:0,11,66	0/0:38,0:4:2.12:0,2,48	0/0:34,0:8:11.34:0,11,70	1/1:14,14:28:38.25:246,38,0	0/0:17,0:16:46.53:0,47,396	0/0:13,0:12:35.87:0,36,294	0/0:38,0:34:88.18:0,88,606	1/1:17,13:29:68.96:518,69,0	0/0:16,0:10:28.17:0,28,236	0/0:16,0:15:28.09:0,28,293	1/1:13,12:23:56.15:407,56,0	0/0:12,0:11:29.76:0,30,248	1/1:14,12:23:61.67:426,62,0	0/0:13,0:12:35.81:0,36,286	0/0:14,0:14:38.20:0,38,347	0/0:29,0:28:66.38:0,66,521	1/1:8,7:13:32.99:228,33,0	0/0:42,0:37:38.32:0,38,437	0/0:40,0:40:99:0,114,678	0/0:14,0:12:18.48:0,18,130	1/1:13,12:24:53.37:315,53,0	0/0:7,0:5:11.85:0,12,94	0/0:15,0:13:29.48:0,29,248	1/1:6,13:18:45.79:325,46,0	0/0:27,0:25:73.70:0,74,605	0/0:44,0:40:99:0,102,643	0/0:23,0:14:35.69:0,36,268
chr10	89267378	.	A	AC	578.65	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=13.621;DP=656;FS=0.000;HRun=0;HaplotypeScore=160.3774;InbreedingCoeff=0.7765;MQ=43.96;MQ0=50;MQRankSum=-7.835;QD=2.28;ReadPosRankSum=3.569;VQSLOD=2.8460;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:43.21:0,43,363	0/0:6,0:5:14.78:0,15,96	0/1:40,0:2:0.71:1,0,13	0/0:33,0:7:5.02:0,5,43	1/1:14,14:28:6.63:65,7,0	0/0:17,0:16:44.20:0,44,373	0/0:12,0:11:32.85:0,33,261	0/0:38,0:34:57.18:0,57,264	1/1:18,13:30:13.48:92,13,0	0/0:18,0:12:30.98:0,31,242	0/0:16,0:15:41.80:0,42,339	1/1:13,12:23:22.92:125,23,0	0/0:12,0:11:29.93:0,30,253	1/1:16,12:25:21.68:122,22,0	0/0:13,0:12:32.69:0,33,242	0/0:16,0:16:35.71:0,36,343	0/0:29,0:28:70.83:0,71,559	1/1:8,7:13:16.96:101,17,0	0/1:42,0:37:14.23:14,0,184	0/0:40,0:40:42.13:0,42,318	0/0:13,0:11:16.83:0,17,113	1/1:14,12:25:2.22:89,2,0	0/0:7,0:5:11.50:0,11,89	0/0:16,0:14:28.68:0,29,242	1/1:6,13:18:39.04:156,39,0	0/0:30,0:28:81.29:0,81,649	0/0:44,0:40:33.09:0,33,298	0/0:22,0:13:32.83:0,33,250
chr10	89267379	.	A	AC	3992.19	PASS	AB=0.983;AC=23;AF=0.411;AN=56;BaseQRankSum=15.881;DP=656;FS=12.269;HRun=0;HaplotypeScore=149.6923;InbreedingCoeff=0.8652;MQ=43.88;MQ0=50;MQRankSum=-11.427;QD=9.86;ReadPosRankSum=7.168;VQSLOD=2.8359;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:40.23:0,40,341	0/0:6,0:5:14.83:0,15,103	0/1:40,0:2:0.85:1,0,7	0/1:34,0:7:1.27:1,0,35	1/1:27,0:27:39.22:252,39,0	0/0:17,0:16:47.42:0,47,392	0/0:12,0:11:29.86:0,30,238	0/1:36,2:34:2.32:266,0,2	1/1:29,0:28:66.82:456,67,0	0/0:18,0:12:31.88:0,32,246	0/0:17,0:16:43.62:0,44,344	1/1:24,0:22:60.63:388,61,0	0/0:12,0:11:29.97:0,30,257	1/1:28,0:25:57.92:384,58,0	0/0:13,0:12:32.80:0,33,254	0/0:16,0:16:41.58:0,42,360	0/0:29,0:28:70.90:0,71,559	1/1:15,0:13:31.25:211,31,0	1/1:34,8:37:55.89:446,56,0	1/1:27,13:40:65.48:501,65,0	0/0:15,0:13:20.42:0,20,134	1/1:25,0:24:51.78:304,52,0	0/0:7,0:5:10.82:0,11,85	0/0:16,0:14:31.62:0,32,258	1/1:19,0:18:43.24:307,43,0	0/0:30,0:28:82.71:0,83,658	1/1:26,18:40:47.72:473,48,0	0/0:23,0:14:32.83:0,33,251
chr10	89267381	.	A	AC	940.41	PASS	AB=0.946;AC=18;AF=0.321;AN=56;BaseQRankSum=13.275;DP=677;FS=0.358;HRun=0;HaplotypeScore=165.2531;InbreedingCoeff=0.5319;MQ=45.90;MQ0=50;MQRankSum=-11.231;QD=2.49;ReadPosRankSum=5.292;VQSLOD=2.6275;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:46.15:0,46,369	0/0:6,0:5:14.83:0,15,104	0/1:44,0:5:6.51:7,0,7	0/0:35,0:7:4.92:0,5,43	1/1:15,14:29:3.36:113,3,0	0/0:18,0:17:49.41:0,49,404	0/0:13,0:12:32.85:0,33,260	0/1:37,0:33:14.12:14,0,141	1/1:16,13:28:21.05:141,21,0	0/0:18,0:12:35.66:0,36,279	0/0:18,0:17:46.31:0,46,361	1/1:12,12:22:28.68:169,29,0	0/0:12,0:11:29.97:0,30,257	1/1:16,12:25:12.16:133,12,0	0/0:14,0:13:32.81:0,33,257	0/0:16,0:16:28.75:0,29,339	0/0:30,0:29:72.78:0,73,568	1/1:7,7:12:27.60:135,28,0	0/1:42,0:37:78.92:79,0,126	0/1:40,0:40:31.20:31,0,180	0/0:16,0:14:18.55:0,19,118	0/1:13,12:24:0.18:104,0,0	0/0:7,0:5:11.91:0,12,96	0/0:16,0:14:31.68:0,32,266	1/1:6,13:19:41.36:195,41,0	0/0:30,0:28:83.69:0,84,687	0/1:45,0:41:7.09:7,0,174	0/0:23,0:14:32.83:0,33,251
chr10	89267385	.	A	AAAAC	3016.48	PASS	AB=0.986;AC=19;AF=0.339;AN=56;BaseQRankSum=15.243;DP=678;FS=1.149;HRun=0;HaplotypeScore=190.8058;InbreedingCoeff=0.5673;MQ=45.99;MQ0=52;MQRankSum=-10.647;QD=8.50;ReadPosRankSum=7.705;VQSLOD=2.3364;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:55.18:0,55,424	0/0:6,0:5:14.73:0,15,96	0/1:44,0:5:11.67:12,0,21	0/0:32,0:7:1.72:0,2,21	1/1:30,0:30:51.60:366,52,0	0/0:20,0:19:56.74:0,57,453	0/0:13,0:12:32.80:0,33,252	0/0:38,0:34:5.46:0,5,122	1/1:29,0:28:57.64:429,58,0	0/0:17,0:11:29.73:0,30,224	0/0:17,0:16:42.98:0,43,300	1/1:24,0:22:55.05:497,55,0	0/0:13,0:12:32.52:0,33,252	1/1:22,5:26:49.22:450,49,0	0/0:14,0:13:35.65:0,36,268	0/0:16,0:16:24.82:0,25,290	0/0:31,0:29:67.55:0,68,547	1/1:15,0:13:32.27:255,32,0	0/1:40,0:36:8.09:145,0,8	0/1:37,0:38:43.25:75,0,43	0/1:17,0:15:22.42:22,0,56	1/1:24,0:23:40.41:435,40,0	0/0:8,0:6:10:0,10,84	0/0:16,0:14:30.76:0,31,256	1/1:21,0:20:54.98:470,55,0	0/0:28,0:26:71.56:0,72,561	0/1:42,0:39:29.74:60,0,30	0/0:21,0:12:26.81:0,27,198
chr10	89267388	.	A	ACAAC	4856.24	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=14.930;DP=664;FS=12.372;HRun=0;HaplotypeScore=178.5206;InbreedingCoeff=0.8676;MQ=42.86;MQ0=52;MQRankSum=-9.251;QD=26.68;ReadPosRankSum=5.575;VQSLOD=3.8019;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:63.03:0,63,857	0/0:6,0:5:15.05:0,15,198	0/0:43,0:5:6.97:0,7,99	0/0:30,0:5:6.53:0,7,49	1/1:28,0:28:55.86:649,56,0	0/0:20,0:19:57.13:0,57,866	0/0:12,0:11:33.11:0,33,494	0/0:41,0:37:65.73:0,66,586	1/1:19,7:26:56.66:721,57,0	0/0:16,0:10:30.10:0,30,443	0/0:17,0:16:44.51:0,45,614	1/1:22,1:21:60.26:796,60,0	0/0:13,0:12:33.11:0,33,509	1/1:27,1:25:52.64:725,53,0	0/0:14,0:13:36.12:0,36,534	0/0:15,0:15:8.50:0,9,564	0/0:31,0:29:82.12:0,82,1172	1/1:15,0:13:34.77:447,35,0	0/0:41,0:36:74.74:0,75,421	0/0:37,0:37:42.82:0,43,313	0/1:17,0:15:13.76:14,0,91	1/1:16,5:21:45.03:692,45,0	0/0:9,0:7:18.02:0,18,233	0/0:16,0:14:33.92:0,34,517	1/1:22,0:21:61.64:812,62,0	0/0:28,0:26:72.23:0,72,1081	0/0:42,0:38:40.90:0,41,349	0/0:21,0:12:27.08:0,27,374
chr10	89267865	.	T	TA	4409.19	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-4.093;DP=547;FS=2.241;HRun=10;HaplotypeScore=56.7739;InbreedingCoeff=0.9070;MQ=70.15;MQ0=4;MQRankSum=0.066;QD=18.76;ReadPosRankSum=4.126;VQSLOD=5.6803;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,44:58:77.63:1016,78,0	1/1:1,4:5:6.02:64,6,0	0/0:27,0:15:29.30:0,29,198	0/0:26,0:11:16.38:0,16,112	1/1:6,15:21:8.53:287,9,0	0/0:23,0:24:54.25:0,54,525	0/0:20,0:20:44.89:0,45,364	0/0:28,0:28:77.90:0,78,640	1/1:3,8:11:24.06:256,24,0	0/0:19,0:18:43.96:0,44,346	0/0:22,0:22:41.81:0,42,335	1/1:1,17:18:42.11:447,42,0	0/0:17,0:17:42.39:0,42,341	1/1:1,10:11:21.05:224,21,0	1/1:1,25:26:47.94:502,48,0	0/0:17,0:17:47.94:0,48,394	1/1:5,24:29:58.03:610,58,0	1/1:6,23:29:17.07:590,17,0	0/0:21,0:21:20.21:0,20,344	0/0:11,0:11:23.77:0,24,182	1/1:2,9:11:18.05:192,18,0	1/1:2,3:5:6.02:64,6,0	0/0:16,0:16:29.89:0,30,240	0/0:23,0:23:68.82:0,69,554	1/1:3,8:11:15.04:158,15,0	0/0:23,0:23:62.87:0,63,513	0/0:16,0:16:1.11:0,1,211	0/0:2,0:2:5.99:0,6,49
chr10	89270162	.	GGAAA	G	5368.17	PASS	AB=1.000;AC=55;AF=0.982;AN=56;BaseQRankSum=-3.925;DP=370;FS=0.000;HRun=0;HaplotypeScore=88.5812;InbreedingCoeff=-0.0367;MQ=71.36;MQ0=2;MQRankSum=1.459;QD=14.51;ReadPosRankSum=-1.317;VQSLOD=4.2480;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:39.40:293,39,0	1/1:4,0:4:6:53,6,0	1/1:21,0:16:15.02:294,15,0	0/1:11,0:10:6.01:94,0,6	1/1:8,1:9:26.74:214,27,0	1/1:9,0:8:11.96:97,12,0	1/1:16,0:16:24.21:202,24,0	1/1:22,0:22:48.10:415,48,0	1/1:15,0:15:29.43:250,29,0	1/1:12,0:12:30.43:271,30,0	1/1:10,0:10:24.01:220,24,0	1/1:12,4:16:37.23:384,37,0	1/1:20,0:20:47.01:385,47,0	1/1:12,0:12:16.73:144,17,0	1/1:8,1:9:20.95:191,21,0	1/1:14,0:14:26.47:242,26,0	1/1:7,0:7:17.87:137,18,0	1/1:9,0:9:18.39:113,18,0	1/1:11,2:11:23.45:232,23,0	1/1:5,0:5:4.36:29,4,0	1/1:21,0:20:35.19:232,35,0	1/1:7,1:8:17.96:152,18,0	1/1:7,0:7:2.23:69,2,0	1/1:22,0:22:9.34:132,9,0	1/1:8,2:10:12.63:101,13,0	1/1:15,0:15:30.26:250,30,0	1/1:15,0:15:21.18:151,21,0	1/1:4,0:4:4.30:21,4,0
chr10	89270199	.	GAAGGAAAGAAGGAAAGAAAGA	G	8645.87	PASS	AB=1.000;AC=38;AF=0.704;AN=54;BaseQRankSum=-6.062;DP=335;FS=4.963;HRun=0;HaplotypeScore=151.9190;InbreedingCoeff=0.1106;MQ=48.51;MQ0=12;MQRankSum=1.748;QD=30.99;ReadPosRankSum=-4.353;VQSLOD=2.3530;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:25.47:44,0,25	1/1:5,0:5:12.04:286,12,0	./.	0/0:11,0:4:9.70:0,10,70	1/1:8,1:9:12.04:359,12,0	0/0:13,0:12:5.98:0,6,112	0/1:13,0:13:11.14:70,0,11	1/1:17,0:12:0.82:565,1,0	1/1:10,0:10:15.50:337,16,0	0/1:12,0:12:99:214,0,184	0/1:6,0:6:53.03:73,0,53	1/1:10,4:14:36.50:1165,36,0	0/1:11,0:11:99:138,0,354	1/1:8,0:8:15:351,15,0	1/1:10,0:10:27.02:751,27,0	0/0:15,0:14:12.93:0,13,500	1/1:12,0:12:33.07:674,33,0	1/1:8,0:8:15:385,15,0	0/1:17,0:13:40.54:233,0,41	1/1:5,0:5:5.39:141,5,0	1/1:24,0:23:66.01:1259,66,0	1/1:3,1:4:3.01:91,3,0	1/1:3,0:3:3.01:34,3,0	1/1:20,0:20:6.02:139,6,0	1/1:11,2:13:30.97:718,31,0	0/1:15,0:14:99:570,0,109	0/0:10,0:10:3.01:0,3,91	0/1:11,0:11:49.25:49,0,201
chr10	89270203	.	GAAAGAAGGAAAGAAAGA	G	9919.65	PASS	AB=1.000;AC=45;AF=0.833;AN=54;BaseQRankSum=-5.881;DP=326;FS=3.321;HRun=0;HaplotypeScore=124.1991;InbreedingCoeff=0.1481;MQ=48.63;MQ0=11;MQRankSum=1.677;QD=33.40;ReadPosRankSum=-3.550;VQSLOD=2.7454;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:19.59:164,20,0	1/1:4,0:4:11.96:247,12,0	./.	0/0:13,0:4:9.44:0,9,66	1/1:7,0:7:12.02:312,12,0	0/1:13,0:12:27.76:28,0,34	1/1:14,0:14:3.48:77,3,0	1/1:17,0:12:29.56:742,30,0	1/1:7,0:7:15.52:391,16,0	1/1:12,0:12:7.79:329,8,0	1/1:6,0:6:0.45:109,0,0	1/1:14,0:14:29.14:1055,29,0	0/1:12,0:12:99:246,0,190	1/1:6,0:6:9.50:307,10,0	1/1:10,1:11:33.03:819,33,0	0/1:14,0:14:5.95:6,0,278	1/1:12,0:12:33.07:800,33,0	1/1:9,0:9:19.27:451,19,0	1/1:13,0:10:22.92:413,23,0	1/1:2,2:4:7.27:145,7,0	1/1:23,0:22:66.16:1417,66,0	1/1:1,2:3:3.01:65,3,0	1/1:0,3:3:3.01:91,3,0	1/1:2,19:21:6.02:139,6,0	1/1:12,0:12:27.04:667,27,0	0/1:16,0:15:34.04:851,0,34	0/0:9,0:9:3.01:0,3,39	0/1:12,0:12:49.25:49,0,108
chr10	89270211	.	GAAAGAAAGA	G	7969.49	PASS	AB=0.905;AC=53;AF=0.946;AN=56;BaseQRankSum=-3.013;DP=314;FS=5.431;HRun=0;HaplotypeScore=84.8242;InbreedingCoeff=0.2877;MQ=52.77;MQ0=9;MQRankSum=-1.719;QD=26.39;ReadPosRankSum=3.514;VQSLOD=3.6129;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:7.84:82,8,0	1/1:1,0:5:14.41:243,14,0	0/0:12,0:4:8.94:0,9,137	0/1:17,0:8:30.93:31,0,65	1/1:4,3:7:12:204,12,0	1/1:0,15:14:6.02:125,6,0	1/1:1,15:16:1.82:5,2,0	1/1:7,0:12:34.58:677,35,0	1/1:1,0:6:14.97:299,15,0	1/1:0,11:11:29.98:571,30,0	1/1:0,6:6:9:173,9,0	1/1:7,0:12:27.09:637,27,0	1/1:2,0:8:20.75:263,21,0	1/1:2,0:7:9.03:234,9,0	1/1:5,0:11:30.01:557,30,0	1/1:1,0:16:14.21:85,14,0	1/1:1,0:10:27.04:601,27,0	1/1:2,0:7:15.03:318,15,0	1/1:3,2:8:18.04:378,18,0	1/1:3,0:3:8.96:123,9,0	1/1:1,0:17:44.94:889,45,0	1/1:3,0:3:2.96:19,3,0	1/1:3,0:3:2.96:19,3,0	1/1:19,0:19:6.02:107,6,0	1/1:4,0:9:20.98:394,21,0	1/1:6,0:14:41.83:820,42,0	1/1:0,10:10:3.01:51,3,0	1/1:0,1:12:5.75:66,6,0
chr10	89270388	.	GTTTATTTATTTA	G	1768.52	PASS	AC=10;AF=0.217;AN=46;BaseQRankSum=5.582;DP=264;FS=0.869;HRun=0;HaplotypeScore=98.2464;InbreedingCoeff=0.6587;MQ=55.07;MQ0=4;MQRankSum=-6.475;QD=19.43;ReadPosRankSum=-0.079;VQSLOD=2.0135;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:30.10:0,30,935	./.	./.	./.	0/0:9,0:9:15.05:0,15,661	0/0:16,0:15:33.11:0,33,1739	0/0:8,0:8:9.03:0,9,527	1/1:26,0:25:8.92:77,9,0	0/0:2,0:2:3.01:0,3,176	0/0:7,0:7:12.04:0,12,583	0/0:6,0:6:9.03:0,9,526	0/0:7,0:7:9.03:0,9,526	0/0:5,0:5:6.02:0,6,351	0/0:3,0:3:6.02:0,6,352	1/1:3,2:5:6.02:207,6,0	0/0:5,0:5:6.02:0,6,352	1/1:14,16:30:29.90:1011,30,0	0/0:25,0:25:60.15:0,60,3038	1/1:15,7:19:20.99:558,21,0	./.	0/0:3,0:4:3.01:0,3,77	./.	0/0:7,0:7:12.02:0,12,550	0/0:6,0:6:6.02:0,6,351	0/0:14,0:14:30.10:0,30,1476	0/0:4,0:4:3.01:0,3,176	1/1:6,2:8:3.01:59,3,0	0/0:12,0:11:15.03:0,15,661
chr10	89270588	.	CA	C	389.50	PASS	AB=0.520;AC=1;AF=0.018;AN=56;BaseQRankSum=4.136;DP=489;FS=5.916;HRun=1;HaplotypeScore=50.4488;InbreedingCoeff=0.1624;MQ=67.26;MQ0=1;MQRankSum=-0.538;QD=29.96;ReadPosRankSum=0.281;VQSLOD=2.9876;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,148,2342	0/0:6,0:6:15.05:0,15,239	0/0:24,0:23:59.64:0,60,864	0/0:19,0:17:47.99:0,48,706	0/0:14,0:14:36.12:0,36,572	0/0:14,0:14:42.14:0,42,667	0/0:22,0:22:66.21:0,66,1026	0/0:36,0:36:99:0,108,1646	0/0:16,0:16:45.15:0,45,717	0/0:9,0:9:27.09:0,27,432	0/0:7,0:7:21.07:0,21,335	0/0:16,0:16:45.10:0,45,684	0/0:10,0:10:27.09:0,27,423	0/0:18,0:18:48.16:0,48,766	0/0:20,0:20:57.13:0,57,879	0/0:15,0:15:42.14:0,42,669	0/0:19,0:19:57.18:0,57,886	0/0:17,0:17:42.13:0,42,647	0/0:32,0:30:77.56:0,78,1326	0/0:10,0:10:30.09:0,30,456	0/0:33,0:33:93.32:0,93,1482	0/0:4,0:4:9.03:0,9,144	0/0:11,0:11:33.10:0,33,503	0/0:19,0:19:53.90:0,54,863	0/0:10,0:10:27.09:0,27,431	0/1:1,12:13:8.83:464,0,9	0/0:17,0:17:39.13:0,39,622	0/0:9,0:9:27.09:0,27,431
chr10	89270682	.	CCTG	C	5358.64	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.406;DP=571;FS=0.410;HRun=0;HaplotypeScore=81.9471;InbreedingCoeff=0.9946;MQ=61.75;MQ0=3;MQRankSum=1.400;QD=40.91;ReadPosRankSum=4.634;VQSLOD=6.0335;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:42:99:0,114,2739	0/0:5,0:5:15.05:0,15,370	0/0:20,0:15:35.30:0,35,834	0/0:28,0:25:60.62:0,61,1267	1/1:0,18:18:36.12:670,36,0	0/0:20,0:20:60.21:0,60,1451	0/0:32,0:32:96.32:0,96,2212	0/0:36,0:35:99:0,105,2399	1/1:0,15:15:33.11:614,33,0	0/0:14,0:14:42.14:0,42,943	0/0:11,0:11:33.10:0,33,763	1/1:0,19:19:48.16:893,48,0	0/0:17,0:17:51.13:0,51,1186	1/1:0,12:12:21.07:391,21,0	0/0:17,0:17:51.18:0,51,1248	0/0:17,0:17:51.13:0,51,1185	0/0:40,0:40:99:0,102,2380	1/1:0,16:16:33.11:613,33,0	0/0:24,0:21:60.17:0,60,1331	0/0:9,0:9:24.08:0,24,577	1/1:0,31:31:71.75:1341,72,0	1/1:0,10:10:27.09:503,27,0	0/0:12,0:12:36.09:0,36,833	0/0:28,0:28:75.26:0,75,1831	1/1:0,10:10:18.06:335,18,0	0/0:29,0:29:81.74:0,82,1948	0/0:24,0:24:68.97:0,69,1567	0/0:13,0:13:39.13:0,39,957
chr10	89271950	.	CCTGCAGTG	C	4192.38	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.921;DP=570;FS=9.817;HRun=0;HaplotypeScore=145.9424;InbreedingCoeff=0.9897;MQ=84.63;MQ0=0;MQRankSum=-8.285;QD=64.50;ReadPosRankSum=-2.104;VQSLOD=2.9904;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,4505	0/0:4,0:4:12.04:0,12,424	0/0:19,0:19:57.19:0,57,2028	0/0:17,0:17:51.18:0,51,2023	0/0:16,0:16:48.16:0,48,2128	0/0:18,0:18:54.19:0,54,2348	0/0:32,0:32:96.33:0,96,4246	1/1:0,15:15:39.09:975,39,0	0/0:19,0:19:57.20:0,57,2457	0/0:21,0:21:63.22:0,63,2584	0/0:7,0:7:21.05:0,21,771	0/0:30,0:30:84.29:0,84,3856	0/0:16,0:16:48.16:0,48,2085	0/0:21,0:21:63.22:0,63,2406	0/0:17,0:17:51.18:0,51,2157	0/0:22,0:22:66.23:0,66,2952	0/0:44,0:44:99:0,132,5869	0/0:29,0:29:87.30:0,87,3983	1/1:1,11:12:33.11:818,33,0	1/1:1,15:16:33.11:960,33,0	0/0:46,0:46:99:0,138,5864	0/0:14,0:14:42.13:0,42,1728	0/0:10,0:10:30.10:0,30,1292	0/0:24,0:24:72.25:0,72,3127	0/0:18,0:18:54.19:0,54,2241	0/0:15,0:15:45.15:0,45,1961	1/1:0,22:22:48.16:1439,48,0	0/0:9,0:9:27.09:0,27,1167
chr10	89272264	.	CT	C	291.82	PASS	AB=0.883;AC=6;AF=0.107;AN=56;BaseQRankSum=3.628;DP=599;FS=4.941;HRun=12;HaplotypeScore=72.8926;InbreedingCoeff=0.2548;MQ=72.00;MQ0=0;MQRankSum=-0.062;QD=3.10;ReadPosRankSum=1.309;VQSLOD=-0.0154;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:36:45.78:0,46,261	0/0:0,0:6:14.20:0,14,71	0/0:26,0:18:19.12:0,19,154	0/1:14,1:10:32.03:32,0,38	0/0:18,0:18:42.06:0,42,410	0/1:9,3:13:30.80:31,0,249	0/0:18,1:19:24.84:0,25,426	0/0:39,0:41:44.89:0,45,775	0/0:20,0:20:51.08:0,51,503	0/1:25,2:28:8.24:8,0,314	0/0:15,0:15:36.06:0,36,360	0/1:19,3:22:41.23:41,0,345	0/0:22,0:22:18.32:0,18,479	0/0:12,0:12:30.06:0,30,305	0/0:8,0:20:31.57:0,32,183	0/0:17,1:18:27.84:0,28,451	0/0:12,0:33:57.19:0,57,319	0/0:22,1:23:39.86:0,40,576	0/0:28,0:29:60.39:0,60,579	0/0:20,1:21:19.06:0,19,380	1/1:2,13:16:40.88:308,41,0	0/0:20,1:21:21.84:0,22,398	0/0:7,0:7:18.04:0,18,183	0/0:20,0:21:51.09:0,51,512	0/0:14,0:14:33.53:0,34,331	0/0:38,1:42:68.47:0,68,837	0/0:28,0:29:62.23:0,62,635	0/0:11,0:11:21.04:0,21,213
chr10	89273898	.	G	GA	576.17	PASS	AB=0.889;AC=9;AF=0.167;AN=54;BaseQRankSum=0.506;DP=331;FS=2.981;HRun=8;HaplotypeScore=74.2550;InbreedingCoeff=0.5637;MQ=39.06;MQ0=18;MQRankSum=-3.946;QD=9.45;ReadPosRankSum=-3.481;VQSLOD=1.4927;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:22.14:0,22,240	0/0:9,0:9:12:0,12,109	1/1:5,0:1:2.37:8,2,0	./.	0/0:10,0:9:2.72:0,3,27	0/0:7,0:7:5.98:0,6,55	0/0:15,0:14:20.26:0,20,191	1/1:8,8:13:27.08:308,27,0	0/0:5,0:4:5.70:0,6,55	0/0:12,0:12:24:0,24,216	0/0:11,0:10:5.99:0,6,55	0/0:7,0:7:0.76:0,1,47	0/0:10,0:10:11.95:0,12,109	0/0:7,0:7:15.01:0,15,137	0/0:10,0:9:18:0,18,163	0/0:12,0:12:14.94:0,15,137	0/0:17,0:17:2.07:0,2,213	0/0:16,0:14:7.78:0,8,152	0/1:14,2:12:9.47:111,0,9	1/1:7,9:15:19.30:187,19,0	0/0:13,0:12:11.98:0,12,110	0/0:11,0:11:27:0,27,242	0/0:20,0:20:20.63:0,21,187	0/0:18,0:18:23.89:0,24,219	0/0:13,0:13:27:0,27,247	0/0:15,0:15:33:0,33,300	1/1:4,4:7:9.03:104,9,0	0/0:8,0:5:5.94:0,6,55
chr10	89275108	.	AT	A	2730.81	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.513;DP=620;FS=0.366;HRun=11;HaplotypeScore=69.7356;InbreedingCoeff=0.8525;MQ=70.69;MQ0=1;MQRankSum=-2.337;QD=17.51;ReadPosRankSum=4.946;VQSLOD=4.3784;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,46:52:95.30:914,95,0	1/1:1,5:6:14.98:123,15,0	0/0:15,0:13:17.90:0,18,156	0/0:10,0:10:1.61:0,2,49	0/0:20,2:22:7.84:0,8,485	0/0:23,0:25:66.03:0,66,686	0/0:26,0:26:71.74:0,72,703	0/0:10,0:33:72.14:0,72,369	0/0:18,2:20:7.86:0,8,495	0/0:21,1:22:32.49:0,32,545	0/0:20,2:22:20.42:0,20,403	0/0:16,0:16:45.10:0,45,472	0/0:11,1:12:8.44:0,8,295	0/0:22,0:22:57.11:0,57,586	1/1:6,22:28:30.92:461,31,0	0/0:14,0:14:42.11:0,42,448	1/1:2,33:35:89.88:739,90,0	0/0:27,1:28:50.50:0,50,717	0/0:7,0:19:33.18:0,33,168	0/0:7,0:25:39.65:0,40,201	1/1:4,31:35:80.87:665,81,0	0/0:21,0:21:54.12:0,54,568	0/0:21,0:21:51.11:0,51,536	0/0:27,1:30:52.29:0,52,752	0/0:15,0:15:36.08:0,36,377	0/0:20,2:23:4.71:0,5,433	0/0:4,0:18:34.16:0,34,171	0/0:3,0:3:6.02:0,6,64
chr10	89275445	.	TTG	T	1138.83	PASS	AB=0.938;AC=17;AF=0.304;AN=56;BaseQRankSum=0.316;DP=606;FS=0.683;HRun=0;HaplotypeScore=149.5550;InbreedingCoeff=0.6111;MQ=47.93;MQ0=20;MQRankSum=-1.027;QD=7.30;ReadPosRankSum=2.887;VQSLOD=3.0651;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:31:11.08:0,11,76	0/0:1,0:7:5.59:0,6,26	0/0:64,0:17:12.04:0,12,172	0/0:61,0:25:18.22:0,18,179	1/1:5,12:17:26.95:268,27,0	0/0:12,0:12:15.05:0,15,233	0/0:22,0:22:24.06:0,24,349	0/0:23,0:22:27.09:0,27,415	1/1:5,4:10:9.03:105,9,0	0/1:21,1:23:16.40:16,0,519	0/0:15,0:15:24.08:0,24,352	1/1:2,7:10:17.98:181,18,0	0/0:16,0:16:0.81:0,1,424	1/1:5,6:11:15.04:175,15,0	0/0:11,0:23:13.98:0,14,74	0/0:29,1:29:4.43:0,4,775	0/0:10,0:15:8.74:0,9,64	1/1:11,5:14:18.05:201,18,0	0/0:15,0:15:18.06:0,18,282	0/0:21,0:21:39.13:0,39,598	0/0:28,0:28:3.95:0,4,32	1/1:4,9:14:18.05:210,18,0	0/0:23,1:24:36.12:0,36,548	0/0:35,0:35:63.17:0,63,954	1/1:8,8:17:14.83:139,15,0	0/1:22,2:24:15.36:15,0,677	0/1:13,1:14:19.96:20,0,173	0/0:6,0:6:12.04:0,12,188
chr10	89276448	.	G	GATGTCAGCACTCAC	11945.13	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-1.687;DP=636;FS=12.240;HRun=0;HaplotypeScore=246.5184;InbreedingCoeff=0.8667;MQ=86.44;MQ0=1;MQRankSum=-12.674;QD=110.60;ReadPosRankSum=2.317;VQSLOD=3.2077;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,14:27:47.53:3158,48,0	1/1:4,7:11:27.09:1826,27,0	0/0:33,0:33:91.55:0,92,3160	0/0:32,0:32:76.88:0,77,2544	0/0:23,0:23:63.22:0,63,2616	0/0:9,0:9:24.08:0,24,1015	0/0:22,0:22:60.19:0,60,2276	0/0:43,0:42:95.85:0,96,3982	0/0:19,0:19:54.19:0,54,2228	0/0:18,0:18:51.18:0,51,2019	0/0:13,0:13:39.13:0,39,1560	0/0:22,0:22:60.19:0,60,2208	0/0:25,0:25:63.20:0,63,2309	0/0:22,0:22:63.22:0,63,2610	1/1:16,19:39:75.23:5001,75,0	0/0:20,0:20:60.21:0,60,2343	1/1:10,3:15:33.11:1794,33,0	0/1:16,0:15:99:166,0,1288	0/0:24,0:24:66.21:0,66,2381	0/0:23,0:23:57.20:0,57,2257	0/0:26,0:26:75.26:0,75,3040	0/0:28,0:28:75.26:0,75,3003	0/0:16,0:16:45.15:0,45,1851	0/0:25,0:25:72.21:0,72,2835	0/0:21,0:21:63.22:0,63,2554	0/0:28,0:28:84.28:0,84,3202	0/0:22,0:22:57.20:0,57,2239	0/0:14,0:14:36.12:0,36,1515
chr10	89276479	.	TCA	T	564.23	PASS	AB=0.926;AC=23;AF=0.479;AN=48;BaseQRankSum=4.693;DP=575;FS=5.930;HRun=0;HaplotypeScore=111.6480;InbreedingCoeff=0.4081;MQ=68.06;MQ0=8;MQRankSum=-0.645;QD=2.04;ReadPosRankSum=0.475;VQSLOD=1.9267;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,2:29:3:32,3,0	0/0:10,0:10:3.01:0,3,44	./.	./.	./.	0/0:10,0:18:2.99:0,3,26	0/0:22,0:29:24.05:0,24,292	./.	1/1:20,4:25:14.70:124,15,0	0/1:13,0:13:1.13:1,0,63	0/0:11,0:11:3.01:0,3,32	1/1:15,7:22:18.05:192,18,0	0/0:16,0:16:18.02:0,18,216	1/1:21,0:22:5.85:46,6,0	0/0:30,1:31:20.88:0,21,255	0/1:20,0:20:6.16:6,0,202	0/0:13,0:13:8.87:0,9,131	0/1:13,7:18:1.28:142,0,1	1/1:21,0:22:2.84:14,3,0	0/1:14,0:16:8.18:8,0,13	1/1:20,0:22:2.84:14,3,0	1/1:14,6:20:5.97:52,6,0	0/1:11,0:11:16.68:17,0,92	0/0:36,0:35:18.06:0,18,263	1/1:14,1:14:3:32,3,0	0/0:27,0:26:9.01:0,9,93	1/1:13,0:18:8.36:42,8,0	0/0:10,0:11:9.02:0,9,114
chr10	89278303	.	TTGTGTGTGTG	T	1414.44	PASS	AB=1.000;AC=23;AF=0.442;AN=52;BaseQRankSum=5.105;DP=431;FS=19.451;HRun=0;HaplotypeScore=127.1500;InbreedingCoeff=0.6895;MQ=39.05;MQ0=65;MQRankSum=-7.738;QD=7.86;ReadPosRankSum=-2.999;VQSLOD=0.4652;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:20:17.48:0,17,817	0/0:2,0:2:3.01:0,3,134	./.	./.	1/1:16,3:14:5.29:39,5,0	0/0:13,0:11:5.76:0,6,163	0/0:28,0:24:6.49:0,6,259	0/1:18,0:17:11.60:12,0,93	1/1:9,4:9:12:237,12,0	0/0:15,0:12:24.08:0,24,877	0/0:15,0:10:11.18:0,11,485	1/1:7,6:12:11.95:167,12,0	0/0:18,0:18:33.82:0,34,1090	1/1:10,2:10:6.02:128,6,0	0/0:11,0:5:9.03:0,9,409	0/0:14,0:11:15.05:0,15,568	0/0:29,0:23:30.10:0,30,1216	1/1:12,1:8:3.01:89,3,0	1/1:11,1:10:2.92:89,3,0	1/1:4,8:10:14.95:179,15,0	1/1:15,0:22:0.45:2,0,0	1/1:13,3:12:8.94:120,9,0	0/0:14,0:12:11.19:0,11,344	0/0:39,0:34:36.59:0,37,1454	1/1:7,3:7:8.65:148,9,0	0/0:17,0:13:15.05:0,15,488	1/1:12,5:16:15.52:387,16,0	0/0:10,0:5:12.02:0,12,406
chr10	89278648	.	T	TGG	2582.24	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.358;DP=448;FS=1.840;HRun=5;HaplotypeScore=76.3089;InbreedingCoeff=0.9694;MQ=62.96;MQ0=4;MQRankSum=-0.920;QD=32.69;ReadPosRankSum=1.585;VQSLOD=3.2919;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,21:27:48.12:801,48,0	1/1:0,5:4:8.99:124,9,0	0/0:13,0:8:21.06:0,21,254	0/0:25,0:21:50.08:0,50,596	0/0:17,0:16:39.12:0,39,496	0/0:15,0:14:39.08:0,39,478	0/0:21,0:21:51.16:0,51,650	0/0:23,0:23:57.18:0,57,726	0/0:14,0:14:36.11:0,36,459	0/0:21,0:21:45.09:0,45,556	0/0:22,0:22:50.60:0,51,648	0/0:16,0:16:42.12:0,42,522	0/0:11,0:11:30.08:0,30,369	0/0:8,0:8:24.08:0,24,305	1/1:4,14:18:36.12:623,36,0	0/0:14,0:14:39.12:0,39,497	1/1:5,24:28:69.24:1190,69,0	0/0:8,0:8:21.06:0,21,268	0/0:14,0:14:24.07:0,24,306	0/0:15,0:15:30.09:0,30,382	0/0:25,0:25:72.23:0,72,918	0/0:9,0:9:12.03:0,12,153	0/0:10,0:10:26.53:0,27,343	0/0:14,0:14:39.12:0,39,496	0/0:11,0:11:27.08:0,27,344	0/0:22,0:22:53.24:0,53,686	0/0:14,0:14:39.12:0,39,496	0/0:7,0:7:21.07:0,21,268
chr10	89278729	.	AAAG	A	505.60	PASS	AB=0.979;AC=12;AF=0.214;AN=56;BaseQRankSum=7.215;DP=529;FS=30.238;HRun=0;HaplotypeScore=83.1798;InbreedingCoeff=-0.0543;MQ=49.03;MQ0=30;MQRankSum=-4.290;QD=2.40;ReadPosRankSum=0.747;VQSLOD=-0.0622;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:24:72.23:72,0,83	0/1:7,0:7:18.76:21,0,19	0/0:48,0:14:17.82:0,18,176	0/1:31,0:5:0.69:1,0,49	0/0:19,0:18:22.67:0,23,172	0/0:19,0:19:29.94:0,30,396	0/0:31,0:29:25.84:0,26,509	0/1:23,0:23:73.92:74,0,157	0/0:13,0:13:16.37:0,16,137	0/0:19,0:19:25.74:0,26,447	0/0:15,0:12:15.20:0,15,269	0/0:15,0:14:24.90:0,25,176	0/0:13,0:13:19.21:0,19,220	0/1:18,0:18:9.26:9,0,111	0/1:14,5:19:18.57:187,0,19	0/0:15,0:15:17.46:0,17,291	1/1:16,2:17:17.17:199,17,0	0/1:16,0:16:9.04:9,0,89	0/1:22,0:20:55.58:56,0,76	0/1:11,0:11:11.82:12,0,39	0/0:18,0:17:43.57:0,44,551	0/0:15,0:15:4.47:0,4,99	0/0:17,0:17:16.84:0,17,243	0/0:20,0:20:32.51:0,33,397	0/0:8,0:7:8.24:0,8,89	0/0:18,0:18:34.51:0,35,527	0/1:21,0:21:14.19:14,0,63	0/0:15,0:14:8:0,8,238
chr10	89278732	.	GAAAA	G	1154.18	PASS	AB=0.743;AC=14;AF=0.250;AN=56;BaseQRankSum=6.739;DP=536;FS=3.722;HRun=17;HaplotypeScore=91.9202;InbreedingCoeff=0.6336;MQ=50.89;MQ0=28;MQRankSum=-3.349;QD=6.38;ReadPosRankSum=5.621;VQSLOD=-0.6087;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,1:27:15.93:283,16,0	0/1:3,1:7:30.87:36,0,31	0/0:49,0:16:29.11:0,29,368	0/1:31,0:6:5.90:6,0,62	0/0:13,0:20:38.84:0,39,443	0/0:20,0:20:39.01:0,39,687	0/0:25,0:27:63.01:0,63,980	1/1:12,11:23:9.22:318,9,0	0/0:10,0:13:23.95:0,24,297	0/0:17,0:17:42.12:0,42,650	0/0:16,0:14:35.65:0,36,560	0/0:13,0:13:23.94:0,24,252	0/0:12,0:12:27.51:0,28,427	0/0:15,0:17:25.45:0,25,302	0/1:10,1:19:23.31:46,0,23	0/0:18,0:18:34.50:0,35,531	0/1:10,0:20:2.99:20,0,3	0/0:14,0:16:20.26:0,20,193	1/1:10,10:18:24.19:329,24,0	1/1:5,6:12:13:154,13,0	0/0:18,0:17:34.67:0,35,538	0/0:11,0:15:17.88:0,18,186	0/0:15,0:18:38.11:0,38,494	0/0:19,0:20:30.05:0,30,575	0/0:4,0:7:9.03:0,9,137	0/0:17,0:18:47.61:0,48,728	1/1:8,12:20:11.56:141,12,0	0/0:15,0:15:35.33:0,35,599
chr10	89280926	.	AGTGTGT	A	523	PASS	AB=1.000;AC=10;AF=0.227;AN=44;BaseQRankSum=2.478;DP=307;FS=9.960;HRun=0;HaplotypeScore=64.9133;InbreedingCoeff=0.3780;MQ=57.71;MQ0=14;MQRankSum=-3.490;QD=5.68;ReadPosRankSum=1.484;VQSLOD=0.5781;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:18.06:0,18,536	./.	./.	./.	0/0:11,0:11:3.01:0,3,94	0/1:19,0:17:35.37:35,0,414	0/0:11,0:10:15.05:0,15,483	0/1:19,0:18:31.49:31,0,62	0/0:9,0:8:3.01:0,3,80	0/0:5,0:6:6.02:0,6,134	0/0:11,0:13:9.03:0,9,192	./.	0/0:3,0:2:3.01:0,3,95	0/0:4,0:4:3.01:0,3,77	./.	0/0:7,0:7:6.02:0,6,188	1/1:16,4:20:9.50:183,10,0	1/1:8,4:13:6.02:102,6,0	0/0:14,0:13:0.47:0,0,1	1/1:9,2:12:12.04:242,12,0	./.	0/0:6,0:6:6.02:0,6,167	0/0:10,0:10:6.02:0,6,193	0/0:11,0:11:12.04:0,12,346	0/0:5,0:5:6.02:0,6,193	0/0:11,0:11:12.04:0,12,358	1/1:8,1:9:3.01:61,3,0	0/0:9,0:8:15.05:0,15,312
chr10	89281015	.	TTA	T	1582.32	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=7.884;DP=212;FS=2.129;HRun=0;HaplotypeScore=28.3130;InbreedingCoeff=0.6624;MQ=71.27;MQ0=0;MQRankSum=1.664;QD=23.62;ReadPosRankSum=-1.159;VQSLOD=3.4352;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.14:0,42,692	0/0:4,0:4:12.03:0,12,181	0/0:3,0:3:5.38:0,5,59	0/0:5,0:5:5.88:0,6,42	0/0:6,0:6:18.06:0,18,305	0/1:13,0:13:0.58:1,0,543	0/0:1,0:1:3.01:0,3,52	1/1:7,29:36:87.26:1115,87,0	0/0:7,0:7:21.06:0,21,333	0/0:6,0:6:18.06:0,18,307	0/0:10,0:10:27.09:0,27,461	0/0:4,0:4:12.04:0,12,200	0/0:2,0:2:6.02:0,6,104	./.	0/0:3,0:3:9.03:0,9,152	0/0:6,0:6:18.06:0,18,312	0/0:18,0:18:51.17:0,51,862	0/0:20,0:20:51.17:0,51,864	1/1:0,5:5:15.05:200,15,0	1/1:1,9:10:24.04:300,24,0	0/0:1,0:1:3.01:0,3,52	0/0:2,0:2:6.02:0,6,94	0/0:4,0:4:12.04:0,12,208	0/0:1,0:1:3.01:0,3,52	0/0:12,0:12:33.11:0,33,571	0/0:6,0:6:18.06:0,18,306	1/1:1,2:3:9.03:116,9,0	0/0:8,0:8:24.05:0,24,385
chr10	89281151	.	AG	A	7179.14	PASS	AB=1.000;AC=55;AF=0.982;AN=56;BaseQRankSum=1.510;DP=465;FS=0.000;HRun=1;HaplotypeScore=95.7477;InbreedingCoeff=-0.0197;MQ=83.90;MQ0=0;MQRankSum=-2.902;QD=15.44;ReadPosRankSum=3.234;VQSLOD=4.8815;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:69.46:405,69,0	1/1:6,0:6:11.38:68,11,0	1/1:16,0:17:15.81:172,16,0	0/1:15,0:15:10.42:169,0,10	1/1:13,0:13:35.16:208,35,0	1/1:17,0:17:43.90:257,44,0	1/1:19,0:19:49.52:280,50,0	1/1:30,0:30:81.57:421,82,0	1/1:14,0:14:40.99:241,41,0	1/1:0,9:9:26.35:173,26,0	1/1:15,0:15:43.94:262,44,0	1/1:18,0:18:43.89:257,44,0	1/1:13,0:13:32.19:188,32,0	1/1:12,0:12:32.24:194,32,0	1/1:24,0:24:64.33:376,64,0	1/1:15,0:15:41.40:239,41,0	1/1:37,0:37:99:601,100,0	1/1:13,0:13:35.08:206,35,0	1/1:0,15:15:43.75:270,44,0	1/1:19,0:19:55.72:336,56,0	1/1:25,0:25:73.16:428,73,0	1/1:13,0:13:38.02:221,38,0	1/1:18,0:18:27.84:251,28,0	1/1:13,0:13:35.13:206,35,0	1/1:17,0:17:40.94:242,41,0	1/1:13,0:13:37.12:188,37,0	1/1:15,0:15:41.11:253,41,0	1/1:4,0:4:11.75:71,12,0
chr10	89281637	.	CCA	C	2532.94	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.200;DP=558;FS=9.761;HRun=0;HaplotypeScore=75.9026;InbreedingCoeff=0.9944;MQ=61.98;MQ0=6;MQRankSum=-3.018;QD=30.89;ReadPosRankSum=0.301;VQSLOD=5.0854;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,1:39:69.43:0,69,1893	0/0:9,0:9:24.08:0,24,432	0/0:13,0:7:14.80:0,15,261	0/0:23,0:14:33.09:0,33,523	0/0:31,0:31:84.29:0,84,1496	0/0:26,0:26:69.24:0,69,1227	0/0:14,0:14:42.14:0,42,735	1/1:7,16:20:39.10:509,39,0	0/0:18,0:18:51.17:0,51,902	0/0:23,0:22:66.23:0,66,1157	0/0:15,0:15:39.12:0,39,671	0/0:15,0:15:45.15:0,45,799	0/0:24,0:24:72.25:0,72,1295	0/0:19,0:19:57.20:0,57,1020	0/0:21,0:21:51.17:0,51,887	0/0:16,0:16:48.16:0,48,865	0/0:24,0:24:72.25:0,72,1265	0/0:22,0:22:66.23:0,66,1188	1/1:1,12:12:33.11:462,33,0	1/1:0,18:18:45.15:630,45,0	0/0:25,0:25:69.24:0,69,1226	0/0:14,0:14:42.13:0,42,727	0/0:19,0:19:57.20:0,57,1025	0/0:20,0:19:60.21:0,60,1081	0/0:16,0:15:45.15:0,45,795	0/0:20,0:20:60.21:0,60,1081	1/1:1,27:27:78.26:1092,78,0	0/0:10,0:10:30.10:0,30,540
chr10	89281734	.	GT	G	1916.45	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=9.556;DP=440;FS=5.041;HRun=9;HaplotypeScore=68.9622;InbreedingCoeff=0.7044;MQ=62.81;MQ0=4;MQRankSum=-0.425;QD=10.36;ReadPosRankSum=0.750;VQSLOD=2.4449;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.95:0,79,897	0/0:3,0:8:11.53:0,12,77	0/0:16,0:5:9.62:0,10,91	0/0:9,0:5:6.28:0,6,35	0/1:21,0:19:36.71:43,0,37	0/0:18,0:18:48.08:0,48,520	0/0:9,0:9:24.04:0,24,263	1/1:4,23:27:60.84:549,61,0	1/1:12,0:12:14.64:43,15,0	0/0:17,0:17:42.12:0,42,477	0/0:18,0:18:45.11:0,45,498	0/1:8,0:8:10.23:14,0,10	0/0:15,0:15:42.10:0,42,459	1/1:12,0:12:12.92:31,13,0	0/0:7,0:15:28.87:0,29,175	0/0:10,0:10:30.09:0,30,346	0/0:4,0:34:68.47:0,68,369	0/1:17,0:17:15.63:44,0,16	1/1:2,13:14:38.76:340,39,0	1/1:0,24:24:71.83:635,72,0	1/1:6,0:6:6.80:19,7,0	1/1:2,0:2:3.06:8,3,0	0/0:4,0:4:12.04:0,12,138	0/0:5,0:5:15.04:0,15,173	1/1:24,0:24:22.04:54,22,0	0/0:31,0:31:81.19:0,81,912	1/1:4,12:17:38.61:339,39,0	0/0:18,0:18:54.08:0,54,576
chr10	89281743	.	TA	T	2591.35	PASS	AB=0.992;AC=24;AF=0.429;AN=56;BaseQRankSum=6.057;DP=452;FS=4.539;HRun=7;HaplotypeScore=71.7956;InbreedingCoeff=0.6332;MQ=67.40;MQ0=4;MQRankSum=-0.253;QD=11.42;ReadPosRankSum=3.340;VQSLOD=2.2964;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,1:30:10.39:10,0,125	0/1:6,0:6:15.76:16,0,18	0/0:23,1:10:11.67:0,12,149	0/0:8,0:7:7.34:0,7,57	1/1:3,18:20:53.95:513,54,0	0/0:15,0:15:39.12:0,39,480	0/0:9,0:9:24.06:0,24,283	0/1:27,0:26:18.01:18,0,42	1/1:0,12:12:27.05:274,27,0	0/0:17,0:17:48.12:0,48,557	0/0:19,0:19:51.11:0,51,578	1/1:1,7:8:21.04:213,21,0	0/0:15,0:15:42.11:0,42,492	1/1:0,15:15:27.06:274,27,0	1/1:11,0:11:21.24:112,21,0	0/0:13,0:13:36.09:0,36,420	1/1:34,0:34:58.48:293,58,0	1/1:1,15:16:36.07:365,36,0	0/1:15,0:15:7.75:8,0,36	0/0:27,0:27:0.82:0,1,64	1/1:0,6:6:15.03:152,15,0	1/1:0,2:2:6.01:61,6,0	0/0:6,0:6:14.94:0,15,165	0/0:5,0:5:15.05:0,15,185	1/1:0,24:24:48.10:488,48,0	0/0:27,0:27:78.22:0,78,937	0/0:18,0:18:2.56:0,3,81	0/0:20,0:20:57.16:0,57,682
chr10	89281852	.	GAAA	G	3530.32	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=2.525;DP=472;FS=2.101;HRun=14;HaplotypeScore=77.0435;InbreedingCoeff=0.9526;MQ=57.33;MQ0=4;MQRankSum=1.896;QD=19.08;ReadPosRankSum=6.256;VQSLOD=2.6851;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,24:33:50.94:620,51,0	1/1:2,2:4:6:69,6,0	0/0:11,0:4:12.03:0,12,186	0/0:8,0:4:5.75:0,6,50	1/1:11,5:17:20.92:234,21,0	0/0:13,0:16:36.04:0,36,538	0/0:31,0:32:57.17:0,57,1021	0/0:8,0:23:47.35:0,47,370	1/1:2,20:23:51.07:579,51,0	0/0:12,0:12:24.03:0,24,383	0/0:17,0:18:41.96:0,42,578	1/1:3,8:12:23.92:263,24,0	0/0:13,0:14:25.22:0,25,323	1/1:1,8:9:21.06:241,21,0	1/1:4,12:17:17.92:193,18,0	0/0:15,0:14:36.12:0,36,637	1/1:11,19:32:69.80:756,70,0	1/1:3,8:11:20.95:228,21,0	0/0:7,0:16:41.92:0,42,427	0/0:11,0:15:29.82:0,30,256	0/0:4,1:16:15.91:0,16,50	1/1:3,8:12:16.53:208,17,0	0/0:13,0:14:30.04:0,30,451	0/0:22,0:23:49.67:0,50,809	1/1:4,11:15:12.01:140,12,0	0/0:19,0:20:42.06:0,42,609	0/0:9,0:14:23.96:0,24,213	0/0:16,0:16:44.98:0,45,522
chr10	89282244	.	AT	A	1994.56	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=9.976;DP=567;FS=0.461;HRun=8;HaplotypeScore=54.3962;InbreedingCoeff=0.8427;MQ=70.07;MQ0=0;MQRankSum=-2.028;QD=19.75;ReadPosRankSum=-2.702;VQSLOD=2.5848;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:84.11:0,84,981	0/0:6,0:6:18.06:0,18,217	0/0:6,0:6:6.01:0,6,59	0/1:10,0:10:20.78:21,0,45	0/0:30,0:30:84.26:0,84,1014	0/0:22,0:22:60.18:0,60,725	0/0:16,0:16:42.13:0,42,507	1/1:6,22:28:66.09:633,66,0	0/0:23,0:23:66.19:0,66,786	0/0:23,0:23:54.15:0,54,642	0/0:12,0:12:36.11:0,36,435	0/0:18,0:18:45.14:0,45,544	0/0:24,0:24:66.19:0,66,784	0/0:16,0:16:39.12:0,39,471	0/0:21,0:21:60.17:0,60,714	0/0:30,0:30:84.23:0,84,993	0/0:39,0:39:99:0,108,1304	0/0:23,0:23:60.13:0,60,696	1/1:5,15:20:45.06:435,45,0	1/1:1,15:16:45.07:435,45,0	0/0:18,0:18:51.16:0,51,616	0/0:12,0:12:36.03:0,36,402	0/0:20,0:20:60.18:0,60,724	0/0:13,0:13:39.12:0,39,471	0/0:21,0:21:51.14:0,51,603	0/0:29,0:29:78.23:0,78,932	1/1:0,27:27:65.64:637,66,0	0/0:11,0:11:27.08:0,27,326
chr10	89282364	.	GGGGCTGGGGATT	G	48.55	PASS	AB=0.829;AC=4;AF=0.071;AN=56;BaseQRankSum=1.671;DP=431;FS=0.000;HRun=0;HaplotypeScore=137.8718;InbreedingCoeff=0.3158;MQ=64.27;MQ0=5;MQRankSum=1.180;QD=2.21;ReadPosRankSum=-2.984;VQSLOD=1.8228;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.23:0,90,4675	0/0:8,0:8:24.08:0,24,1439	0/0:7,0:7:18.04:0,18,816	0/0:10,0:10:18.06:0,18,757	0/0:12,0:11:27.08:0,27,1286	0/0:23,0:23:66.23:0,66,3429	0/0:24,0:23:69.24:0,69,4006	0/1:6,2:7:86.55:87,0,240	0/0:12,0:12:36.12:0,36,2132	0/0:18,0:18:54.19:0,54,3278	0/0:19,0:19:57.20:0,57,3156	0/0:13,0:13:39.13:0,39,2145	0/0:12,0:12:36.12:0,36,2150	0/0:13,0:13:36.12:0,36,2216	0/0:11,0:11:33.11:0,33,1818	0/0:14,0:14:42.14:0,42,2644	0/0:38,0:38:99:0,105,5415	0/0:12,0:12:30.10:0,30,1584	1/1:2,0:1:3.01:53,3,0	0/1:10,2:12:2.76:3,0,453	0/0:31,0:31:87.28:0,87,4300	0/0:11,0:10:30.10:0,30,1597	0/0:17,0:17:48.15:0,48,2603	0/0:21,0:21:63.22:0,63,3553	0/0:20,0:20:60.20:0,60,3467	0/0:17,0:16:48.16:0,48,2670	0/0:1,0:1:3.01:0,3,90	0/0:13,0:12:33.11:0,33,2079
chr10	89282727	.	TAAAAAAAAAA	T	6391.82	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.826;DP=541;FS=3.395;HRun=14;HaplotypeScore=170.8507;InbreedingCoeff=0.9391;MQ=72.73;MQ0=4;MQRankSum=-9.024;QD=50.33;ReadPosRankSum=4.429;VQSLOD=2.0122;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:21:57.06:0,57,1935	0/0:0,0:3:9.03:0,9,343	0/0:24,0:16:17.01:0,17,203	0/0:20,0:10:2.02:0,2,76	1/1:3,24:27:50.85:1090,51,0	0/0:18,0:19:48.16:0,48,2146	0/0:12,0:13:33.11:0,33,1484	0/0:7,0:24:57.14:0,57,1022	1/1:1,24:25:45.15:1291,45,0	0/0:20,0:20:57.19:0,57,2302	0/0:14,0:17:51.17:0,51,2029	1/1:2,13:15:27.08:789,27,0	0/0:22,0:22:63.17:0,63,2420	1/1:0,23:23:39.13:1128,39,0	0/0:6,0:20:51.14:0,51,1725	0/0:27,0:27:78.24:0,78,3414	0/0:9,0:36:72.10:0,72,2470	1/1:0,12:12:18.06:515,18,0	0/0:7,0:20:48.14:0,48,887	0/0:3,0:14:35.83:0,36,624	0/0:8,0:13:33.08:0,33,910	1/1:1,3:4:9.03:263,9,0	0/0:10,0:13:28.91:0,29,1250	0/0:13,0:14:39.13:0,39,1710	1/1:0,21:21:45.15:1315,45,0	0/0:32,0:32:87.28:0,87,3603	0/0:2,0:31:81.28:0,81,1698	0/0:9,0:9:24.97:0,25,1018
chr10	89284965	.	TAC	T	224.11	PASS	AB=0.958;AC=19;AF=0.396;AN=48;BaseQRankSum=0.589;DP=626;FS=2.986;HRun=0;HaplotypeScore=213.3339;InbreedingCoeff=-0.1138;MQ=54.15;MQ0=22;MQRankSum=-0.386;QD=0.63;ReadPosRankSum=-0.911;VQSLOD=2.3026;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:22:3.23:17,3,0	1/1:6,0:6:2.74:12,3,0	./.	./.	./.	0/1:19,1:19:61.05:72,0,61	0/0:26,0:24:15.04:0,15,220	./.	1/1:20,0:18:2.47:7,2,0	0/1:27,1:25:85.07:85,0,163	0/1:11,1:12:30.17:42,0,30	0/1:25,0:21:10.86:11,0,25	0/1:25,0:25:14.54:15,0,129	0/1:20,0:20:0:0,0,0	0/0:30,0:25:0:0,0,0	0/1:24,2:26:11.89:12,0,261	0/1:12,0:10:0.78:2,0,1	0/0:10,0:10:2.88:0,3,15	0/0:16,0:12:11.65:0,12,84	0/0:18,0:18:12.57:0,13,80	0/1:49,1:46:18.38:18,0,46	0/0:22,0:18:2.50:0,2,9	0/1:15,2:17:20.86:21,0,55	0/1:33,2:35:35.08:35,0,334	0/1:14,0:15:0.03:1,0,0	0/1:18,1:17:3.24:3,0,277	0/0:21,0:20:11.72:0,12,118	0/0:8,0:8:7.78:0,8,58
chr10	89285007	.	TAC	T	2023.07	PASS	AB=0.989;AC=15;AF=0.268;AN=56;BaseQRankSum=1.460;DP=921;FS=4.556;HRun=0;HaplotypeScore=239.2773;InbreedingCoeff=0.4191;MQ=38.43;MQ0=51;MQRankSum=-0.041;QD=5.57;ReadPosRankSum=-1.138;VQSLOD=2.8168;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:56,0:47:16.29:16,0,26	0/0:11,0:11:2.33:0,2,131	0/0:50,0:4:12.04:0,12,171	0/0:62,1:10:18.51:0,19,147	0/1:32,0:30:14.67:28,0,15	0/0:22,0:20:12.85:0,13,175	0/0:26,0:24:41.92:0,42,545	1/1:22,4:15:34.66:410,35,0	0/0:33,0:28:9.67:0,10,55	0/0:31,1:28:21.64:0,22,825	0/0:16,0:15:14.07:0,14,174	0/1:41,0:35:4.20:4,0,61	0/0:23,0:23:6.89:0,7,416	1/1:40,0:37:1.64:4,2,0	0/0:52,0:45:18.07:0,18,214	0/0:36,0:34:61.89:0,62,832	0/0:24,0:20:7.54:0,8,135	0/0:19,0:17:10.33:0,10,128	0/1:16,1:13:39.03:112,0,39	1/1:10,2:12:17.86:164,18,0	1/1:68,12:70:82.60:1177,83,0	0/0:36,0:35:11.11:0,11,86	0/0:17,0:16:17.83:0,18,220	0/0:49,0:49:86.73:0,87,1227	0/1:36,0:34:8.84:9,0,40	0/0:33,0:30:76.40:0,76,941	1/1:17,6:23:4.50:266,4,0	0/0:13,1:15:15.41:0,15,439
chr10	89285270	.	A	ACACAGG	10756.23	PASS	AB=0.719;AC=20;AF=0.357;AN=56;BaseQRankSum=16.760;DP=985;FS=20.366;HRun=0;HaplotypeScore=358.1524;InbreedingCoeff=0.8398;MQ=51.88;MQ0=8;MQRankSum=-15.408;QD=32.01;ReadPosRankSum=-9.097;VQSLOD=2.2315;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:19,15:34:46.93:762,47,0	1/1:1,2:3:6.02:195,6,0	0/0:45,0:26:68.99:0,69,1144	0/0:48,0:34:65.95:0,66,1292	1/1:11,10:20:16.88:270,17,0	0/0:17,0:17:42.14:0,42,955	0/0:37,0:37:84.22:0,84,1819	0/0:58,0:58:99:0,160,3470	1/1:15,26:39:87.46:2019,87,0	0/0:40,0:40:99:0,114,2496	0/0:21,0:21:45.14:0,45,1003	1/1:19,30:48:99:2156,108,0	0/0:30,0:30:84.26:0,84,1788	1/1:21,23:42:68.22:1566,68,0	1/1:15,27:41:68.18:1186,68,0	0/0:52,0:52:99:0,144,3015	0/1:17,14:31:15.18:819,0,15	0/1:16,8:24:7.45:980,0,7	0/0:24,0:21:51.17:0,51,1071	0/0:29,0:29:62.90:0,63,1297	0/0:108,0:108:99:0,217,4865	1/1:11,15:26:17.93:299,18,0	0/0:21,0:21:48.15:0,48,1073	0/0:49,0:49:99:0,129,2907	1/1:9,11:20:27.92:504,28,0	0/0:35,0:35:99:0,99,2162	0/0:23,0:23:50.37:0,50,1110	0/0:11,0:11:30.03:0,30,600
chr10	89285274	.	A	AGG	3105.90	PASS	AB=0.964;AC=15;AF=0.268;AN=56;BaseQRankSum=15.646;DP=980;FS=32.906;HRun=0;HaplotypeScore=319.9784;InbreedingCoeff=0.3325;MQ=50.72;MQ0=6;MQRankSum=-11.982;QD=9.47;ReadPosRankSum=-5.376;VQSLOD=1.5762;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,2:33:49.32:152,0,49	0/1:4,0:4:10.88:59,0,11	0/0:47,0:30:90.04:0,90,1394	0/0:48,0:36:95.88:0,96,1473	1/1:18,3:20:17.15:251,17,0	0/0:19,0:19:42.14:0,42,683	0/0:42,0:42:99:0,108,1702	0/0:56,0:56:99:0,166,2639	0/1:38,1:38:79.02:449,0,79	0/0:39,0:39:99:0,117,1865	0/0:21,0:21:45.15:0,45,731	0/1:43,5:48:8.88:631,0,9	0/0:30,0:30:87.25:0,87,1333	1/1:36,3:37:22.49:519,22,0	1/1:38,4:41:2.14:465,2,0	0/0:52,0:52:99:0,142,2355	0/1:30,0:30:99:180,0,100	0/1:23,1:25:99:242,0,207	0/0:24,0:21:57.14:0,57,870	0/0:30,0:30:62.22:0,62,945	0/0:104,0:104:99:0,223,3603	1/1:21,4:25:14.09:157,14,0	0/0:21,0:21:48.16:0,48,777	0/0:50,0:50:99:0,132,2132	0/1:19,0:19:99:177,0,111	0/0:35,0:35:99:0,105,1665	0/0:23,0:23:50.66:0,51,800	0/0:11,0:11:33.04:0,33,476
chr10	89285278	.	ACT	A	49.80	PASS	AB=0.987;AC=7;AF=0.125;AN=56;BaseQRankSum=6.973;DP=966;FS=4.866;HRun=0;HaplotypeScore=334.0996;InbreedingCoeff=0.1249;MQ=50.36;MQ0=5;MQRankSum=-4.392;QD=0.36;ReadPosRankSum=-4.553;VQSLOD=1.1428;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:33:15.71:0,16,215	0/1:5,0:5:2.99:3,0,53	0/0:50,0:35:98.23:0,98,1466	0/0:46,1:36:71.91:0,72,1201	1/1:15,0:14:2.98:22,3,0	0/0:19,0:19:48.10:0,48,823	0/0:40,0:40:99:0,108,1758	0/0:54,0:54:99:0,156,2824	0/0:42,0:40:18.75:0,19,640	0/0:39,0:39:99:0,114,2049	0/0:21,0:21:48.03:0,48,873	0/0:50,0:49:55.30:0,55,768	0/0:30,0:30:81.22:0,81,1419	0/1:37,1:37:15.76:16,0,342	0/0:43,0:42:13.81:0,14,248	0/0:46,0:46:99:0,135,2420	0/1:28,0:28:3.51:4,0,313	0/1:23,1:24:99:106,0,372	0/0:24,0:21:57.86:0,58,833	0/0:29,0:29:39.45:0,39,961	0/0:106,0:106:99:0,227,4113	0/1:28,0:28:12.98:13,0,58	0/0:21,0:21:48.16:0,48,902	0/0:50,0:50:99:0,135,2398	0/0:16,1:17:17.88:0,18,216	0/0:33,0:33:97.38:0,97,1752	0/0:22,0:22:45.60:0,46,833	0/0:9,0:9:27.09:0,27,500
chr10	89285315	.	CAG	C	313.97	PASS	AB=0.994;AC=16;AF=0.296;AN=54;BaseQRankSum=12.462;DP=928;FS=23.791;HRun=0;HaplotypeScore=296.3616;InbreedingCoeff=0.2372;MQ=45.54;MQ0=11;MQRankSum=-8.623;QD=0.93;ReadPosRankSum=3.280;VQSLOD=1.2516;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:36:10.48:20,0,10	1/1:8,0:8:2.40:20,2,0	0/0:49,0:27:69.16:0,69,641	0/0:42,0:18:44.89:0,45,435	./.	0/0:25,0:25:38.41:0,38,977	0/0:44,0:44:78.17:0,78,1643	0/0:40,0:39:19.35:0,19,742	0/1:36,1:36:24.92:88,0,25	0/0:48,0:47:77.64:0,78,1619	0/0:20,0:20:12.65:0,13,509	0/1:41,1:41:6.03:80,0,6	0/0:37,0:37:97.62:0,98,1537	1/1:44,0:42:15.80:70,16,0	1/1:32,1:33:7.31:57,7,0	0/0:27,0:27:57.96:0,58,1134	0/1:22,0:22:14.41:14,0,73	0/1:23,0:23:7.06:7,0,116	0/1:27,0:27:99:100,0,336	0/1:24,0:23:4.05:4,0,166	0/0:86,0:84:35.38:0,35,1044	0/0:30,0:30:3:0,3,25	0/0:22,0:22:63.11:0,63,851	0/0:55,0:55:99:0,127,2070	1/1:19,0:19:2.04:6,2,0	0/0:33,0:32:53.95:0,54,1269	0/0:15,1:15:18.22:0,18,182	0/1:20,0:20:2.59:3,0,510
chr10	89285317	.	GAC	G	822.09	PASS	AB=0.937;AC=21;AF=0.404;AN=52;BaseQRankSum=11.074;DP=939;FS=0.964;HRun=0;HaplotypeScore=294.3926;InbreedingCoeff=0.2871;MQ=45.77;MQ0=12;MQRankSum=-7.022;QD=1.79;ReadPosRankSum=4.816;VQSLOD=1.5814;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:36:2.13:34,0,2	1/1:7,0:7:8.26:36,8,0	0/0:47,0:25:2.02:0,2,45	0/0:41,0:15:8.99:0,9,102	./.	0/1:25,1:26:2.28:2,0,776	0/1:40,4:45:46.14:46,0,1133	0/0:41,0:40:33.20:0,33,284	1/1:38,0:37:37.18:161,37,0	0/1:45,5:49:99:106,0,1075	0/1:17,3:20:74.32:74,0,298	1/1:39,0:39:29.61:129,30,0	0/0:35,1:36:49.41:0,49,1142	1/1:43,0:42:34.95:150,35,0	1/1:33,0:33:29.92:130,30,0	0/0:26,1:27:28.39:0,28,890	0/1:22,0:22:2.03:28,0,2	0/1:21,0:23:21.04:21,0,69	0/0:28,0:28:14.40:0,14,209	0/0:24,0:23:9.87:0,10,92	0/0:79,0:83:50.75:0,51,398	./.	0/0:23,0:23:42.12:0,42,621	0/0:53,1:55:61.49:0,61,1385	1/1:19,0:19:2.74:12,3,0	0/1:31,3:34:34.34:34,0,968	0/0:7,0:25:13.40:0,13,106	0/1:17,2:20:31.40:31,0,549
chr10	89285324	.	ACACACACACACACACACACATGCACG	A	11813.32	PASS	AB=0.880;AC=16;AF=0.308;AN=52;BaseQRankSum=11.018;DP=947;FS=3.047;HRun=0;HaplotypeScore=552.3068;InbreedingCoeff=0.7401;MQ=45.80;MQ0=12;MQRankSum=-11.987;QD=43.75;ReadPosRankSum=5.216;VQSLOD=0.8047;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,18:41:3.28:208,3,0	1/1:0,9:9:9.03:592,9,0	0/0:40,0:15:30.10:0,30,1247	0/0:36,0:8:18.06:0,18,883	./.	0/0:26,0:26:58.27:0,58,6376	0/0:47,0:47:99:0,118,9028	0/0:47,0:46:99:0,111,5262	1/1:23,18:40:45.15:2928,45,0	0/0:53,0:52:99:0,144,11575	0/0:19,0:19:42.14:0,42,3623	1/1:23,14:37:38.21:2408,38,0	0/0:38,0:38:99:0,99,8470	1/1:12,29:40:39.13:2602,39,0	1/1:17,18:35:33.58:2214,34,0	0/0:29,0:29:81.28:0,81,7027	0/1:18,4:22:51.91:589,0,52	0/1:18,2:21:69.16:69,0,256	0/0:26,0:26:66.23:0,66,2846	0/0:27,0:26:35.86:0,36,2116	0/0:78,0:76:94.64:0,95,6140	./.	0/0:21,0:21:53.70:0,54,4155	0/0:53,0:53:99:0,116,10492	1/1:7,14:21:2.85:203,3,0	0/0:40,0:39:99:0,111,9302	0/0:26,0:25:19.11:0,19,732	0/0:23,0:23:66.23:0,66,5548
chr10	89285344	.	ATG	A	3174.14	PASS	AB=0.952;AC=21;AF=0.404;AN=52;BaseQRankSum=14.181;DP=862;FS=3.521;HRun=0;HaplotypeScore=226.7179;InbreedingCoeff=0.5536;MQ=58.91;MQ0=9;MQRankSum=-11.430;QD=8.56;ReadPosRankSum=1.230;VQSLOD=3.5138;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:25:9.04:89,9,0	1/1:9,0:9:8.86:108,9,0	0/0:39,1:25:75.06:0,75,1292	0/0:40,1:20:12.18:0,12,797	./.	0/0:22,2:24:19.19:0,19,1116	0/0:49,0:49:99:0,132,2270	0/1:35,4:38:36.64:37,0,1372	1/1:24,7:32:60.16:794,60,0	0/0:58,1:58:99:0,105,2753	0/0:16,0:16:41.55:0,42,615	1/1:15,8:24:44.80:544,45,0	0/0:35,0:35:98.94:0,99,1773	1/1:29,0:29:38.87:484,39,0	1/1:24,10:35:45.15:619,45,0	0/0:35,0:35:99:0,102,1789	1/1:14,6:20:27.48:290,27,0	0/1:13,1:15:81.96:82,0,96	0/1:25,1:26:9.38:9,0,728	0/1:30,1:30:95.04:95,0,472	0/1:71,1:71:99:177,0,1341	./.	0/0:19,0:19:51.65:0,52,998	0/0:52,0:52:99:0,132,2453	1/1:14,0:14:3.01:40,3,0	0/0:42,0:41:99:0,123,2149	0/0:18,0:18:20.82:0,21,300	0/0:25,0:25:71.69:0,72,1234
chr10	89286173	.	AGGTCTCCC	A	15930.56	PASS	AB=0.754;AC=32;AF=0.571;AN=56;BaseQRankSum=15.268;DP=582;FS=0.000;HRun=0;HaplotypeScore=168.3029;InbreedingCoeff=0.8334;MQ=69.82;MQ0=1;MQRankSum=-15.694;QD=43.53;ReadPosRankSum=-0.480;VQSLOD=4.2598;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:27:57.20:1476,57,0	1/1:3,5:8:6.49:152,6,0	0/0:13,0:12:27.09:0,27,887	0/0:19,0:18:33.11:0,33,1179	1/1:2,6:8:11.59:322,12,0	0/0:17,0:17:48.16:0,48,2027	0/0:32,0:32:84.29:0,84,3514	1/1:8,8:16:24.07:479,24,0	0/1:6,18:24:77.75:1233,0,78	0/0:22,0:22:60.21:0,60,2376	0/0:9,0:9:18.06:0,18,678	1/1:3,25:28:66.23:1739,66,0	0/0:29,0:29:84.29:0,84,3465	1/1:4,19:23:54.19:1446,54,0	1/1:2,24:26:63.22:1688,63,0	0/1:14,1:15:38.82:39,0,1602	1/1:5,15:20:27.09:728,27,0	1/1:7,22:29:45.15:1213,45,0	1/1:11,19:30:54.16:1227,54,0	1/1:4,9:13:21.07:516,21,0	1/1:22,24:46:33.37:709,33,0	1/1:5,14:19:30.17:794,30,0	0/0:10,0:10:27.09:0,27,1130	0/0:26,0:26:75.26:0,75,3071	1/1:1,11:12:21.07:555,21,0	0/0:25,0:25:69.24:0,69,2890	1/1:0,22:22:58.58:1613,59,0	0/0:14,0:14:36.12:0,36,1487
chr10	89287050	.	A	AG	3012.81	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-12.240;DP=694;FS=8.135;HRun=5;HaplotypeScore=83.1552;InbreedingCoeff=0.9897;MQ=90.00;MQ0=0;MQRankSum=-3.300;QD=29.25;ReadPosRankSum=-2.265;VQSLOD=2.9091;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,132,1393	0/0:5,0:5:12.03:0,12,129	0/0:29,0:29:81.16:0,81,851	0/0:25,0:25:68.75:0,69,714	0/0:22,0:22:48.08:0,48,500	0/0:25,0:25:66.16:0,66,709	0/0:25,0:25:69.17:0,69,741	1/1:8,24:32:72.23:946,72,0	0/0:38,0:38:99:0,108,1152	0/0:27,0:27:63.16:0,63,676	0/0:18,0:18:48.11:0,48,508	0/0:25,0:25:72.15:0,72,763	0/0:26,0:26:69.15:0,69,732	0/0:22,0:22:60.15:0,60,645	0/0:34,0:34:96.24:0,96,1032	0/0:19,0:19:54.14:0,54,580	0/0:35,0:35:93.19:0,93,981	0/0:15,0:15:42.08:0,42,442	1/1:4,22:26:66.14:827,66,0	1/1:1,10:12:21.01:256,21,0	0/0:25,0:25:69.15:0,69,726	0/0:20,0:20:51.10:0,51,529	0/0:18,0:18:51.11:0,51,538	0/0:26,0:26:66.16:0,66,709	0/0:24,0:24:66.15:0,66,702	0/0:26,0:26:69.17:0,69,741	1/1:4,29:32:87.28:1144,87,0	0/0:9,0:9:24.05:0,24,251
chr10	89287156	.	TG	T	6768.22	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.595;DP=624;FS=8.093;HRun=6;HaplotypeScore=95.9107;InbreedingCoeff=0.9837;MQ=75.80;MQ0=0;MQRankSum=0.365;QD=26.44;ReadPosRankSum=5.238;VQSLOD=4.6334;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,38:41:99:1128,105,0	1/1:0,2:2:6.02:64,6,0	0/0:20,0:19:33.99:0,34,425	0/0:14,0:15:27.94:0,28,338	1/1:1,8:9:24.06:258,24,0	0/0:17,0:17:51.12:0,51,651	0/0:31,0:31:90.29:0,90,1182	0/0:26,0:26:54.59:0,55,319	1/1:2,28:30:75.18:806,75,0	0/0:15,0:15:36.12:0,36,469	0/0:10,0:10:24.06:0,24,301	1/1:2,23:25:66.17:709,66,0	0/0:18,0:18:45.14:0,45,573	1/1:2,28:30:69.17:741,69,0	1/1:0,27:27:69.17:741,69,0	0/0:23,0:23:63.15:0,63,794	1/1:3,32:35:90.23:966,90,0	1/1:2,23:25:48.12:515,48,0	0/0:21,0:21:27.18:0,27,252	0/0:12,0:12:26.26:0,26,182	0/0:64,0:64:99:0,190,2467	1/1:0,13:13:33.08:355,33,0	0/0:13,0:13:39.13:0,39,509	0/0:33,0:33:90.29:0,90,1182	1/1:1,18:19:45.11:484,45,0	0/0:18,0:18:51.16:0,51,664	0/0:23,0:23:53.98:0,54,356	0/0:9,0:9:27.09:0,27,354
chr10	89287814	.	C	CCTT	12937.38	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=11.278;DP=697;FS=1.755;HRun=0;HaplotypeScore=107.8536;InbreedingCoeff=0.9975;MQ=82.19;MQ0=0;MQRankSum=-3.125;QD=53.02;ReadPosRankSum=4.414;VQSLOD=7.1947;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,120,1856	1/1:0,6:6:18.06:386,18,0	0/0:36,0:36:87.08:0,87,1236	0/0:24,0:23:43.25:0,43,664	1/1:0,19:19:54.14:1114,54,0	0/0:20,0:20:60.20:0,60,924	0/0:31,0:31:66.17:0,66,972	0/0:41,0:41:99:0,102,1492	1/1:4,33:37:93.32:1940,93,0	0/0:25,0:25:66.21:0,66,979	0/0:16,0:16:42.14:0,42,649	1/1:2,25:28:69.24:1481,69,0	0/0:18,0:18:48.16:0,48,742	1/1:2,22:25:69.24:1465,69,0	1/1:3,16:19:48.16:1030,48,0	0/0:30,1:31:19.81:0,20,1164	1/1:6,30:38:90.27:1888,90,0	1/1:2,27:30:72.20:1494,72,0	0/0:23,0:23:48.12:0,48,698	0/0:10,0:10:27.09:0,27,418	0/0:32,0:32:90.27:0,90,1348	1/1:2,17:20:48.16:1029,48,0	0/0:20,0:20:54.03:0,54,809	0/0:22,0:22:66.21:0,66,998	1/1:7,15:22:54.14:1111,54,0	0/0:28,0:28:84.28:0,84,1279	0/0:22,0:22:63.21:0,63,974	0/0:8,0:8:24.06:0,24,349
chr10	89288434	.	C	CA	4633.39	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=0.432;DP=666;FS=5.037;HRun=6;HaplotypeScore=96.5713;InbreedingCoeff=0.9994;MQ=64.94;MQ0=2;MQRankSum=0.793;QD=31.74;ReadPosRankSum=1.470;VQSLOD=4.6792;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:75.06:0,75,709	0/0:10,0:10:27.06:0,27,275	0/0:31,0:26:62.95:0,63,602	0/0:31,0:26:59.61:0,60,582	1/1:5,15:20:45.10:543,45,0	0/0:12,0:11:33.06:0,33,330	0/0:24,0:24:66.15:0,66,673	0/0:22,0:19:45.10:0,45,459	1/1:2,20:23:54.17:675,54,0	0/0:30,0:30:81.12:0,81,805	0/0:18,0:18:48.10:0,48,490	1/1:1,17:18:48.15:594,48,0	0/0:21,0:21:51.11:0,51,520	1/1:1,22:23:60.19:754,60,0	0/0:25,0:25:60.13:0,60,612	0/0:33,1:34:61.48:0,61,941	0/0:41,0:39:99:0,114,1163	1/1:1,20:21:60.19:753,60,0	0/0:16,0:16:42.09:0,42,429	0/0:19,0:19:57.13:0,57,582	0/0:34,0:34:93.21:0,93,948	1/1:3,18:21:51.16:635,51,0	0/0:15,0:15:45.08:0,45,446	0/0:42,0:42:99:0,114,1152	1/1:0,20:20:54.17:679,54,0	0/0:26,0:26:72.16:0,72,734	0/0:26,0:26:66.14:0,66,673	0/0:8,0:8:24.05:0,24,245
chr10	89288462	.	G	GAGA	1105.61	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.557;DP=741;FS=20.678;HRun=0;HaplotypeScore=133.1958;InbreedingCoeff=0.9762;MQ=55.69;MQ0=19;MQRankSum=-7.051;QD=29.88;ReadPosRankSum=-1.692;VQSLOD=1.6272;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,19:36:74.80:1200,75,0	0/0:12,0:12:36.12:0,36,613	0/0:38,0:12:14.03:0,14,207	0/0:45,0:15:31.07:0,31,489	0/0:18,0:18:54.15:0,54,836	0/0:17,0:16:48.15:0,48,773	0/0:30,0:30:80.12:0,80,1334	0/0:31,0:29:75:0,75,980	0/0:24,0:24:66.18:0,66,1040	0/0:32,0:31:87.28:0,87,1421	0/0:23,0:23:63.20:0,63,1019	0/0:22,0:22:51.12:0,51,794	0/0:17,0:17:51.06:0,51,751	0/0:22,0:22:60.12:0,60,829	0/0:30,0:29:81.27:0,81,1349	0/0:37,0:37:99:0,108,1685	0/0:42,0:40:99:0,112,1704	0/0:23,0:23:68.93:0,69,1031	0/0:17,0:17:51.10:0,51,793	0/0:21,0:20:54.16:0,54,866	0/0:36,0:34:99:0,102,1436	0/0:26,0:26:75.20:0,75,1126	0/0:15,0:14:39.13:0,39,647	0/0:41,0:41:99:0,112,1821	0/0:26,0:26:69.16:0,69,1065	0/0:22,0:22:63.22:0,63,1068	0/0:29,0:29:84.24:0,84,1309	0/0:7,0:7:21.07:0,21,358
chr10	89288488	.	TGAAGAG	T	994.72	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.841;DP=745;FS=1.912;HRun=0;HaplotypeScore=165.5109;InbreedingCoeff=0.9790;MQ=57.76;MQ0=19;MQRankSum=-6.997;QD=31.09;ReadPosRankSum=0.600;VQSLOD=3.3777;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,21:31:54.13:1090,54,0	0/0:11,0:11:27.09:0,27,783	0/0:52,0:13:31.32:0,31,508	0/0:62,0:24:42.64:0,43,819	0/0:24,0:24:72.25:0,72,2073	0/0:19,0:19:48.16:0,48,1357	0/0:37,0:37:96.27:0,96,2677	0/0:30,0:29:60.19:0,60,1401	0/0:27,0:27:66.23:0,66,2084	0/0:32,0:32:78.24:0,78,2174	0/0:19,0:19:48.16:0,48,1489	0/0:21,0:21:48.15:0,48,1449	0/0:18,0:18:39.11:0,39,1086	0/0:18,0:18:48.16:0,48,1473	0/0:25,0:24:53.95:0,54,1621	0/0:31,0:31:81.24:0,81,2227	0/0:34,0:34:74.55:0,75,2073	0/0:23,0:23:15.36:0,15,1240	0/0:19,0:19:36.12:0,36,931	0/0:20,0:18:42.14:0,42,1182	0/0:30,0:28:60.20:0,60,1714	0/0:27,0:27:75.24:0,75,2167	0/0:12,0:11:27.09:0,27,902	0/0:39,0:39:90.29:0,90,2624	0/0:29,0:29:78.23:0,78,2253	0/0:23,0:23:60.21:0,60,1768	0/0:24,0:24:60.21:0,60,1895	0/0:7,0:7:21.07:0,21,533
chr10	89288518	.	G	GGGAA	1167.31	PASS	AB=0.710;AC=13;AF=0.260;AN=50;BaseQRankSum=-0.632;DP=686;FS=0.000;HRun=0;HaplotypeScore=123.7542;InbreedingCoeff=0.7354;MQ=53.80;MQ0=30;MQRankSum=-0.916;QD=7.21;ReadPosRankSum=-0.890;VQSLOD=2.6229;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:29:0.81:0,1,9	1/1:7,0:7:5.97:46,6,0	./.	./.	0/0:25,0:25:36.12:0,36,550	0/1:13,8:22:71:316,0,71	1/1:23,9:36:9.03:209,9,0	./.	0/0:24,0:24:27.07:0,27,370	0/0:32,0:32:39.13:0,39,598	0/0:17,0:17:18.06:0,18,276	0/0:19,0:19:39.12:0,39,569	0/0:24,0:23:39.12:0,39,594	1/1:15,0:15:6.02:114,6,0	1/1:28,0:26:12.04:211,12,0	0/0:21,0:21:18.06:0,18,271	1/1:27,0:27:6.02:96,6,0	0/0:25,0:25:42.09:0,42,598	0/0:15,0:19:11.85:0,12,96	0/0:10,0:15:18.02:0,18,167	1/1:27,0:24:18.06:338,18,0	0/0:21,0:21:15.05:0,15,223	0/0:11,0:11:15.02:0,15,188	0/0:34,0:34:48.07:0,48,654	0/0:35,0:37:54.11:0,54,940	0/0:23,0:23:30.09:0,30,438	0/0:15,0:20:7.64:0,8,105	0/0:12,0:9:15.03:0,15,206
chr10	89288564	.	G	GAAGGAAGT	4010.92	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=-0.505;DP=669;FS=3.922;HRun=0;HaplotypeScore=165.0671;InbreedingCoeff=0.2336;MQ=69.85;MQ0=6;MQRankSum=-2.258;QD=9.85;ReadPosRankSum=-2.895;VQSLOD=2.2675;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:33.73:246,34,0	1/1:12,0:12:33.76:288,34,0	0/0:24,0:18:33.90:0,34,399	0/0:18,0:14:32.20:0,32,361	0/1:26,0:26:99:250,0,519	0/1:22,0:22:11.98:12,0,383	0/0:36,0:36:12.53:0,13,441	1/1:31,0:31:86.85:749,87,0	0/1:24,0:24:99:180,0,326	0/0:38,0:38:99:0,111,1732	0/0:14,0:14:40.47:0,40,652	0/1:23,0:23:99:127,0,579	0/0:21,0:21:60.10:0,60,1158	1/1:0,0:20:5.82:92,6,0	1/1:1,29:36:14.53:504,15,0	0/0:25,0:25:45.05:0,45,830	1/1:2,16:26:5.99:154,6,0	0/1:24,0:24:99:143,0,513	0/1:20,0:20:36.81:300,0,37	0/1:17,0:17:99:189,0,143	1/1:2,0:32:18.05:208,18,0	0/1:19,0:19:99:214,0,188	0/0:18,0:18:53.38:0,53,648	0/0:39,0:39:99:0,104,1589	0/1:31,0:31:76.85:77,0,854	0/0:21,0:21:54.12:0,54,953	0/1:21,0:21:74.72:278,0,75	0/0:8,0:8:24.04:0,24,434
chr10	89290800	.	CGTGCA	C	1644.28	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.877;DP=714;FS=10.989;HRun=0;HaplotypeScore=126.4413;InbreedingCoeff=0.9670;MQ=86.32;MQ0=0;MQRankSum=-5.573;QD=38.24;ReadPosRankSum=2.761;VQSLOD=3.4436;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,40:43:84.29:1739,84,0	0/0:5,0:5:12.01:0,12,299	0/0:20,0:20:54.17:0,54,1468	0/0:27,0:27:69.19:0,69,1781	0/0:21,0:21:54.19:0,54,1561	0/0:15,0:15:45.15:0,45,1360	0/0:35,0:35:93.30:0,93,2618	0/0:30,0:30:78.27:0,78,2344	0/0:33,0:33:96.33:0,96,2819	0/0:29,0:29:75.26:0,75,2263	0/0:10,0:10:27.09:0,27,759	0/0:35,0:35:96.33:0,96,2905	0/0:29,0:29:81.26:0,81,2344	0/0:30,0:30:87.30:0,87,2598	0/0:26,0:26:66.23:0,66,2001	0/0:26,0:26:75.24:0,75,2191	0/0:37,0:37:99:0,111,3309	0/0:35,0:35:99:0,102,3077	0/0:25,0:25:63.21:0,63,1829	0/0:10,0:10:24.07:0,24,651	0/0:56,0:56:99:0,163,4967	0/0:17,0:17:51.17:0,51,1513	0/0:15,0:15:45.14:0,45,1314	0/0:27,0:27:81.24:0,81,2331	0/0:13,0:13:36.12:0,36,1059	0/0:27,0:27:78.27:0,78,2397	0/0:26,0:26:66.23:0,66,1978	0/0:12,0:12:36.12:0,36,1055
chr10	89293950	.	CT	C	1999.54	PASS	AB=1.000;AC=45;AF=0.833;AN=54;BaseQRankSum=-2.992;DP=181;FS=1.854;HRun=1;HaplotypeScore=33.6718;InbreedingCoeff=0.4097;MQ=49.90;MQ0=0;MQRankSum=-0.578;QD=11.76;ReadPosRankSum=-0.381;VQSLOD=1.5820;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,1:7:12.94:66,13,0	0/0:2,0:2:5.75:0,6,29	0/0:1,0:1:0:0,0,0	0/0:2,0:2:2.92:0,3,8	1/1:4,0:4:2.90:16,3,0	1/1:13,0:13:29.77:218,30,0	1/1:21,0:21:44.74:337,45,0	1/1:4,5:9:4.18:44,4,0	0/1:2,0:2:0.01:0,0,0	1/1:12,0:12:35.46:239,35,0	1/1:3,0:3:3.47:26,3,0	1/1:5,0:5:8.64:49,9,0	1/1:9,0:9:20.52:140,21,0	1/1:3,0:3:2.92:17,3,0	1/1:6,0:6:5.53:30,6,0	1/1:8,0:8:14.87:108,15,0	1/1:13,0:13:9.18:95,9,0	1/1:10,0:10:22.56:129,23,0	1/1:6,1:7:17.39:96,17,0	1/1:1,0:1:2.92:17,3,0	1/1:6,0:6:5.85:34,6,0	1/1:3,0:3:6.25:32,6,0	1/1:2,1:3:3.01:34,3,0	./.	0/0:2,0:2:0:0,0,0	1/1:12,0:12:35.49:240,35,0	1/1:9,1:10:16.61:89,17,0	1/1:3,0:3:5.97:46,6,0
chr10	89293951	.	TG	T	4594.29	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=-3.361;DP=186;FS=2.334;HRun=1;HaplotypeScore=25.2085;InbreedingCoeff=0.2685;MQ=50.20;MQ0=0;MQRankSum=-0.786;QD=25.81;ReadPosRankSum=1.183;VQSLOD=4.6805;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,3:7:9.50:121,9,0	1/1:1,1:2:0.36:2,0,0	1/1:0,1:1:3:25,3,0	0/0:2,0:2:2.92:0,3,8	1/1:5,1:6:6.01:66,6,0	1/1:0,13:13:30.10:410,30,0	1/1:0,21:21:45.15:625,45,0	1/1:5,4:9:4.74:115,5,0	0/0:2,0:2:0:0,0,0	1/1:0,12:12:36.12:494,36,0	1/1:0,3:3:3.48:42,3,0	1/1:4,1:5:12.03:143,12,0	1/1:0,9:9:21.06:258,21,0	1/1:0,3:3:3.01:35,3,0	1/1:7,0:7:20.57:153,21,0	1/1:0,8:8:17.99:220,18,0	1/1:13,0:13:33.25:345,33,0	1/1:6,4:10:24.04:298,24,0	1/1:7,1:8:21.05:260,21,0	1/1:0,1:1:3.01:32,3,0	1/1:0,6:6:6.02:70,6,0	1/1:3,0:3:6.02:83,6,0	1/1:1,2:3:3.01:34,3,0	./.	1/1:2,0:2:3:25,3,0	1/1:4,9:13:36.12:480,36,0	1/1:1,9:10:17.08:183,17,0	1/1:0,3:3:6.02:75,6,0
chr10	89294990	.	G	GTA	11512.91	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-17.218;DP=875;FS=2.456;HRun=0;HaplotypeScore=103.1945;InbreedingCoeff=0.9988;MQ=67.09;MQ0=14;MQRankSum=-0.056;QD=37.62;ReadPosRankSum=1.061;VQSLOD=6.8280;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,162,2185	0/0:17,0:17:48.11:0,48,680	0/0:52,0:21:18.35:0,18,431	0/0:53,0:29:35.22:0,35,373	1/1:0,33:33:57.20:1065,57,0	0/0:25,0:25:75.07:0,75,900	0/0:27,0:27:75.16:0,75,984	1/1:2,35:37:99:1430,102,0	1/1:2,32:34:60.21:1121,60,0	0/0:31,0:31:93.23:0,93,1224	0/0:26,0:26:69.17:0,69,950	1/1:1,21:23:33.58:618,34,0	0/0:31,0:31:84.16:0,84,1088	1/1:1,26:27:51.17:949,51,0	0/0:37,0:37:99:0,105,1364	0/0:26,0:26:75.20:0,75,1025	0/0:24,0:24:66.18:0,66,910	1/1:1,19:19:48.16:897,48,0	1/1:1,24:23:66.16:1070,66,0	1/1:2,36:39:81.28:1505,81,0	0/0:58,0:58:99:0,150,1982	1/1:0,20:20:45.15:841,45,0	0/0:24,0:24:71.99:0,72,942	0/0:28,0:28:81.20:0,81,1108	1/1:0,22:22:57.20:1066,57,0	0/0:39,0:39:99:0,111,1564	1/1:0,25:24:51.08:950,51,0	0/0:13,0:13:39.13:0,39,572
chr10	89295624	.	TAC	T	681.69	PASS	AB=0.962;AC=29;AF=0.558;AN=52;BaseQRankSum=10.415;DP=789;FS=4.347;HRun=0;HaplotypeScore=142.4130;InbreedingCoeff=0.2921;MQ=59.46;MQ0=34;MQRankSum=-8.468;QD=1.32;ReadPosRankSum=4.482;VQSLOD=2.1403;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:46,0:46:3.28:9,3,0	1/1:13,0:13:8.25:41,8,0	./.	./.	1/1:17,0:17:2.71:14,3,0	0/0:21,0:21:22.09:0,22,285	0/1:41,2:43:20.73:21,0,659	0/0:25,0:25:9.97:0,10,109	1/1:29,0:28:28.36:139,28,0	0/0:35,0:35:55.75:0,56,731	0/0:18,0:18:21.87:0,22,288	1/1:33,0:33:25.44:124,25,0	0/0:16,0:15:20.43:0,20,272	1/1:20,0:20:14.16:68,14,0	1/1:28,0:27:23:127,23,0	0/0:26,0:26:21.24:0,21,670	0/1:39,0:39:10.30:19,0,10	0/1:25,0:24:19.11:19,0,21	0/1:20,0:20:7.57:8,0,24	0/1:22,0:22:26.74:27,0,52	0/1:47,0:42:0:0,0,0	1/1:22,0:22:16.87:82,17,0	0/1:17,1:17:18.32:18,0,148	0/1:42,2:45:44.97:45,0,686	1/1:24,0:23:5.64:27,6,0	0/0:28,1:29:15.05:0,15,503	1/1:20,0:20:12.21:65,12,0	0/1:4,0:5:8.14:8,0,40
chr10	89295639	.	ACACACACACACACACACACACATGCACACACACG	A	415.74	PASS	AB=0.519;AC=1;AF=0.018;AN=56;BaseQRankSum=2.045;DP=799;FS=0.000;HRun=0;HaplotypeScore=431.4344;InbreedingCoeff=0.1134;MQ=51.72;MQ0=41;MQRankSum=-0.033;QD=9.90;ReadPosRankSum=-1.494;VQSLOD=0.6717;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:3,39:41:7.48:490,0,7	0/0:13,0:13:13.29:0,13,580	0/0:30,0:5:9.03:0,9,162	0/0:44,0:8:14.32:0,14,181	0/0:18,0:18:3.48:0,3,225	0/0:18,0:18:39.59:0,40,3966	0/0:36,0:35:88.19:0,88,8146	0/0:24,0:24:62.54:0,63,2288	0/0:31,0:30:30.57:0,31,2456	0/0:35,0:35:99:0,105,9592	0/0:20,0:20:48.16:0,48,4218	0/0:39,0:39:32.66:0,33,2544	0/0:18,0:17:48.16:0,48,4434	0/0:26,0:26:17.85:0,18,1515	0/0:32,0:30:33.42:0,33,1447	0/0:25,0:24:66.21:0,66,7759	0/0:36,0:36:5.66:0,6,823	0/0:26,0:25:18.01:0,18,856	0/0:33,0:30:42.07:0,42,2323	0/0:24,0:24:21.06:0,21,1113	0/0:58,0:51:18.48:0,18,506	0/0:21,0:21:21.94:0,22,1526	0/0:19,0:18:30.10:0,30,2929	0/0:46,0:46:99:0,120,11490	0/0:24,0:23:15.07:0,15,573	0/0:35,0:34:99:0,102,8441	0/0:23,0:23:25.95:0,26,1524	0/0:3,0:3:9.01:0,9,863
chr10	89295650	.	CACACACACACAT	C	2751.17	PASS	AB=0.947;AC=21;AF=0.375;AN=56;BaseQRankSum=12.791;DP=815;FS=5.679;HRun=0;HaplotypeScore=222.8129;InbreedingCoeff=0.3438;MQ=52.67;MQ0=34;MQRankSum=-8.968;QD=6.41;ReadPosRankSum=5.867;VQSLOD=1.5313;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:41:5.93:136,6,0	1/1:2,12:14:11.82:359,12,0	0/0:20,0:4:11.94:0,12,104	0/0:36,0:5:15.02:0,15,156	0/1:22,0:22:5.15:16,0,5	0/0:19,0:19:48.06:0,48,1403	0/0:36,0:35:87.20:0,87,2789	0/1:26,0:26:99:138,0,179	1/1:31,0:30:10.15:213,10,0	0/0:37,0:37:99:0,108,3341	0/0:22,0:22:56.98:0,57,1586	0/1:37,0:37:0.86:200,0,1	0/0:21,0:20:57.05:0,57,1505	1/1:28,1:29:3.27:102,3,0	1/1:3,27:28:23.54:905,24,0	0/0:28,0:27:75.18:0,75,2805	0/1:3,35:38:77.74:233,0,78	0/1:27,0:26:5.97:57,0,6	0/1:35,0:30:18.16:218,0,18	0/1:24,0:24:26.31:89,0,26	0/0:10,51:55:3.02:0,3,16	1/1:21,0:21:17.50:131,18,0	0/0:22,0:21:39.04:0,39,834	0/0:47,0:47:99:0,123,3422	0/1:26,0:26:10.95:21,0,11	0/0:34,0:33:96.17:0,96,2639	0/1:27,0:26:1.31:114,0,1	0/0:3,0:3:9.01:0,9,304
chr10	89295654	.	CACACACAT	C	5629.17	PASS	AB=0.648;AC=26;AF=0.464;AN=56;BaseQRankSum=13.347;DP=799;FS=4.518;HRun=0;HaplotypeScore=178.4992;InbreedingCoeff=0.6715;MQ=54.05;MQ0=30;MQRankSum=-8.991;QD=13.15;ReadPosRankSum=2.760;VQSLOD=3.5337;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:41:8.24:88,8,0	1/1:14,0:14:11.81:214,12,0	0/0:17,0:4:12.03:0,12,143	0/0:32,0:6:18.04:0,18,199	1/1:0,22:22:2.32:87,2,0	0/0:19,0:19:48.06:0,48,1084	0/0:37,0:36:93.16:0,93,2224	1/1:3,21:24:27.23:317,27,0	1/1:3,29:31:29.69:788,30,0	0/0:35,0:35:99:0,103,2447	0/0:19,0:19:47.88:0,48,1158	1/1:2,35:37:30.57:797,31,0	0/0:22,0:21:59.99:0,60,1135	1/1:2,25:27:10.73:428,11,0	1/1:30,0:28:23.32:519,23,0	0/0:28,0:27:75.18:0,75,2148	0/1:38,0:38:50.01:123,0,50	0/1:3,24:26:8.85:175,0,9	1/1:5,30:30:85.14:699,85,0	0/1:4,21:25:6.35:228,0,6	0/0:59,0:54:3.45:0,3,25	1/1:0,21:21:17.79:517,18,0	0/0:22,0:21:39.02:0,39,660	0/0:46,0:46:99:0,120,2539	1/1:1,24:25:6.02:159,6,0	0/0:32,0:31:92.87:0,93,1874	0/1:2,27:29:0.46:490,0,0	0/0:3,0:3:9.01:0,9,200
chr10	89295661	.	ATG	A	740.79	PASS	AB=0.988;AC=28;AF=0.500;AN=56;BaseQRankSum=12.716;DP=774;FS=54.412;HRun=0;HaplotypeScore=146.0502;InbreedingCoeff=0.4964;MQ=55.90;MQ0=19;MQRankSum=-9.839;QD=1.47;ReadPosRankSum=4.362;VQSLOD=0.9307;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:41,1:41:4.73:59,5,0	1/1:13,0:13:6.15:33,6,0	0/0:14,0:7:20.96:0,21,374	0/0:21,0:9:27.09:0,27,489	1/1:22,0:22:2.71:14,3,0	0/0:17,0:17:45.08:0,45,782	0/0:39,0:38:92.79:0,93,1600	0/1:21,1:22:17.75:54,0,18	1/1:32,0:31:24.79:110,25,0	0/0:36,0:36:99:0,108,1797	0/0:17,0:17:42.07:0,42,714	1/1:36,0:36:19.13:115,19,0	0/0:22,0:21:60.20:0,60,1010	1/1:26,0:26:8.95:58,9,0	1/1:30,0:28:22.15:111,22,0	0/1:29,0:28:3.20:3,0,1222	0/1:36,1:37:46.27:50,0,46	0/1:26,0:25:5.62:6,0,25	0/1:35,0:30:43.55:103,0,44	0/1:24,0:24:9.19:29,0,9	1/1:57,0:52:1.40:5,1,0	1/1:21,0:21:16.10:74,16,0	0/0:16,5:20:35.79:0,36,598	0/0:43,1:44:99:0,113,1823	1/1:25,0:25:5.35:29,5,0	0/0:34,1:34:55.11:0,55,1457	1/1:28,0:27:15.35:84,15,0	0/0:3,0:3:9.01:0,9,132
chr10	89296369	.	T	TTC	1408.88	PASS	AB=0.901;AC=36;AF=0.692;AN=52;BaseQRankSum=2.466;DP=661;FS=2.743;HRun=0;HaplotypeScore=122.8559;InbreedingCoeff=0.4746;MQ=57.76;MQ0=15;MQRankSum=-1.689;QD=2.95;ReadPosRankSum=0.021;VQSLOD=2.6948;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:7.32:0,7,60	1/1:17,0:16:5.98:55,6,0	./.	0/1:27,0:13:0:0,0,0	1/1:31,1:31:9.01:106,9,0	1/1:21,3:24:17.55:224,18,0	1/1:18,0:23:6:52,6,0	1/1:35,0:35:3.41:25,3,0	1/1:16,0:16:3:26,3,0	0/0:30,0:30:3.06:0,3,33	0/1:11,3:14:8.13:38,0,8	1/1:20,0:22:8.83:76,9,0	0/0:16,0:16:21.05:0,21,222	./.	1/1:19,1:28:5.91:49,6,0	0/0:18,0:20:14.87:0,15,144	1/1:15,0:15:11.05:101,11,0	1/1:11,0:11:3.47:26,3,0	1/1:27,0:26:14.98:136,15,0	1/1:24,0:25:9.45:78,9,0	0/1:36,0:36:14.42:116,0,14	1/1:22,0:22:6.01:67,6,0	0/0:18,0:18:15.04:0,15,162	0/0:34,0:35:15.92:0,16,320	1/1:17,0:19:11.99:115,12,0	1/1:20,5:28:14.75:144,15,0	1/1:24,0:22:11.99:103,12,0	0/1:19,5:26:25.13:40,0,25
chr10	89296408	.	T	TCTCTCTCC	5777.57	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=-1.966;DP=699;FS=2.152;HRun=0;HaplotypeScore=210.9117;InbreedingCoeff=0.7782;MQ=65.38;MQ0=27;MQRankSum=-3.532;QD=17.09;ReadPosRankSum=-4.957;VQSLOD=3.1757;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:52.63:0,53,588	1/1:5,0:10:8.77:251,9,0	0/0:38,0:20:50.39:0,50,461	0/0:63,0:32:38.30:0,38,360	1/1:20,0:18:24:336,24,0	0/1:27,0:27:22.66:23,0,376	0/1:26,0:25:28.59:29,0,297	1/1:37,0:36:70.76:848,71,0	1/1:4,0:21:9.03:278,9,0	0/0:30,0:30:63.97:0,64,710	0/0:18,0:18:35.96:0,36,334	1/1:22,0:22:43.52:508,44,0	0/0:19,0:19:42.05:0,42,734	1/1:4,0:18:2.93:51,3,0	1/1:19,1:19:20.47:262,20,0	0/0:18,0:18:35.99:0,36,567	1/1:13,1:16:23.87:375,24,0	1/1:11,0:11:15.96:221,16,0	1/1:25,0:26:68.64:796,69,0	1/1:20,0:18:26.14:447,26,0	0/0:39,0:38:8.38:0,8,542	1/1:16,0:16:32.69:309,33,0	0/0:19,0:19:50.69:0,51,697	0/0:30,0:30:40.03:0,40,1036	1/1:19,0:19:44.92:480,45,0	0/0:31,0:30:32.96:0,33,627	1/1:8,17:26:14.69:564,15,0	0/0:25,0:22:3.12:0,3,258
chr10	89296481	.	GCT	G	543.15	PASS	AB=0.935;AC=4;AF=0.071;AN=56;BaseQRankSum=2.422;DP=789;FS=1.596;HRun=0;HaplotypeScore=150.5339;InbreedingCoeff=0.4793;MQ=71.92;MQ0=7;MQRankSum=1.198;QD=3.88;ReadPosRankSum=-0.464;VQSLOD=2.6094;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:26:51.16:628,51,0	0/0:10,0:10:14.97:0,15,245	0/0:45,0:25:18.02:0,18,210	0/1:90,1:50:5.64:6,0,268	0/0:25,1:26:66.20:0,66,1008	0/0:37,2:39:25.42:0,25,1346	0/0:27,0:27:60.20:0,60,978	0/0:35,0:35:60.19:0,60,928	0/0:21,0:21:45.15:0,45,734	0/0:24,0:24:57.18:0,57,890	0/0:17,0:17:39.10:0,39,574	0/0:27,0:27:69.22:0,69,1099	0/0:27,0:27:72.25:0,72,1174	0/0:22,0:22:41.74:0,42,684	0/0:28,0:28:72.25:0,72,1170	0/0:25,0:25:63.19:0,63,998	0/0:19,1:20:20.04:0,20,762	0/0:21,0:20:36.12:0,36,587	0/0:21,1:22:14.23:0,14,722	0/0:27,2:29:41.34:0,41,1176	0/0:17,0:39:71.53:0,72,676	0/0:24,1:25:23.26:0,23,843	0/1:19,3:22:19.71:20,0,656	0/0:31,0:31:75.21:0,75,1166	0/0:12,0:12:27.09:0,27,440	0/0:40,0:40:84.29:0,84,1368	0/0:23,0:23:48.16:0,48,783	0/0:13,0:13:25.28:0,25,515
chr10	89296555	.	GCT	G	12068.17	PASS	AB=0.978;AC=29;AF=0.518;AN=56;BaseQRankSum=15.805;DP=851;FS=0.000;HRun=0;HaplotypeScore=174.8777;InbreedingCoeff=0.9554;MQ=68.46;MQ0=6;MQRankSum=-1.006;QD=27.49;ReadPosRankSum=0.478;VQSLOD=5.4529;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1801	1/1:4,9:13:24.08:312,24,0	0/0:37,1:26:45.14:0,45,723	0/1:43,0:32:2.13:2,0,534	1/1:4,35:38:93.30:1207,93,0	0/0:22,0:21:60.21:0,60,1017	0/0:28,0:28:78.72:0,79,1291	1/1:7,35:42:99:1334,105,0	1/1:1,20:21:51.16:662,51,0	0/0:37,0:37:99:0,108,1815	0/0:20,0:20:51.17:0,51,864	1/1:6,27:33:83.76:1056,84,0	0/0:18,0:18:45.15:0,45,732	1/1:4,23:27:66.21:857,66,0	1/1:4,25:29:66.21:858,66,0	0/0:28,1:29:39.24:0,39,1237	1/1:9,23:30:48.58:925,49,0	1/1:1,17:18:39.13:507,39,0	1/1:4,22:24:60.17:764,60,0	1/1:3,31:33:87.28:1127,87,0	0/0:5,0:49:99:0,110,982	1/1:9,22:31:65.99:857,66,0	0/0:36,0:36:96.33:0,96,1633	0/0:47,0:47:99:0,123,2092	1/1:1,21:22:57.19:741,57,0	0/0:33,0:33:87.29:0,87,1455	1/1:2,25:27:66.21:858,66,0	0/0:18,0:18:54.18:0,54,918
chr10	89296674	.	ACT	A	12821.82	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=15.520;DP=885;FS=2.298;HRun=0;HaplotypeScore=129.8358;InbreedingCoeff=0.9768;MQ=75.98;MQ0=14;MQRankSum=-0.834;QD=29.48;ReadPosRankSum=2.682;VQSLOD=6.6858;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:31:87.28:1119,87,0	1/1:3,10:13:33.11:422,33,0	0/0:45,1:39:13.99:0,14,728	0/0:68,1:50:53.57:0,54,696	1/1:3,24:27:65.86:809,66,0	0/0:35,0:35:93.29:0,93,1503	0/0:31,0:31:66.21:0,66,1085	1/1:8,24:32:72.23:926,72,0	1/1:9,24:33:66.18:849,66,0	0/0:42,0:42:99:0,111,1799	0/0:24,0:24:63.22:0,63,1059	1/1:5,33:37:84.27:1079,84,0	0/0:27,0:27:69.22:0,69,1132	1/1:3,28:30:66.21:849,66,0	1/1:3,33:36:87.28:1119,87,0	0/0:25,2:27:4.05:0,4,1104	1/1:4,42:46:99:1389,108,0	1/1:3,23:26:28.82:752,29,0	1/1:2,13:15:39.11:485,39,0	1/1:6,23:28:60.19:767,60,0	0/0:38,0:38:99:0,107,1750	1/1:4,22:25:63.16:792,63,0	0/0:20,0:20:54.17:0,54,878	0/0:39,0:39:99:0,108,1757	1/1:1,15:15:36.12:463,36,0	0/0:34,0:34:87.29:0,87,1425	1/1:3,31:32:78.08:1001,78,0	0/0:16,0:16:36.09:0,36,566
chr10	89297384	.	TCTGC	T	5695.43	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=7.342;DP=592;FS=11.642;HRun=0;HaplotypeScore=110.2642;InbreedingCoeff=0.8713;MQ=66.53;MQ0=5;MQRankSum=-1.011;QD=18.98;ReadPosRankSum=1.271;VQSLOD=3.8676;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:39:21.90:22,0,492	1/1:0,6:6:18.06:288,18,0	0/0:29,0:24:30.02:0,30,389	0/0:26,0:22:20.91:0,21,230	1/1:1,8:9:18.06:295,18,0	0/0:18,0:18:33.09:0,33,680	0/0:31,0:31:51.11:0,51,965	1/1:11,10:21:30.01:321,30,0	1/1:10,6:16:9.03:147,9,0	0/0:20,0:20:29.21:0,29,512	0/0:11,0:11:14.79:0,15,201	1/1:8,13:21:24.08:393,24,0	0/0:14,0:14:29.99:0,30,635	1/1:5,23:28:54.18:883,54,0	1/1:15,18:33:39.13:638,39,0	0/0:26,0:26:63.19:0,63,1396	1/1:6,23:29:45.15:737,45,0	1/1:6,21:27:48.16:778,48,0	1/1:7,5:11:15.01:195,15,0	1/1:7,9:16:15.05:244,15,0	0/0:31,0:31:59.63:0,60,886	1/1:7,5:10:5.93:66,6,0	0/0:13,0:13:17.16:0,17,260	0/0:32,0:32:78.22:0,78,1675	1/1:4,7:11:3.01:49,3,0	0/0:25,0:25:36.10:0,36,783	1/1:5,15:20:39.13:638,39,0	0/0:16,0:16:39.10:0,39,794
chr10	89297408	.	C	CTGT	596.11	PASS	AB=0.742;AC=1;AF=0.018;AN=56;BaseQRankSum=3.743;DP=654;FS=16.213;HRun=0;HaplotypeScore=128.6506;InbreedingCoeff=-0.0184;MQ=57.94;MQ0=6;MQRankSum=0.663;QD=12.17;ReadPosRankSum=2.449;VQSLOD=2.5220;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,17:48:99:671,0,132	0/0:10,0:10:30.06:0,30,371	0/0:32,0:23:69.08:0,69,1096	0/0:22,0:18:50.50:0,51,691	0/0:24,0:24:66.16:0,66,943	0/0:21,0:21:63.19:0,63,1075	0/0:30,0:30:87.25:0,87,1503	0/0:20,0:20:53.88:0,54,563	0/0:11,0:11:24.07:0,24,353	0/0:22,0:22:66.22:0,66,1123	0/0:16,0:16:44.39:0,44,635	0/0:24,0:24:51.11:0,51,719	0/0:18,0:18:51.16:0,51,881	0/0:29,0:29:69.13:0,69,795	0/0:28,0:28:60.05:0,60,686	0/0:26,0:26:78.26:0,78,1389	0/0:30,0:30:63.10:0,63,697	0/0:31,0:31:72.16:0,72,892	0/0:13,0:12:35.96:0,36,432	0/0:16,0:16:39.05:0,39,466	0/0:31,0:31:84.26:0,84,1410	0/0:21,0:19:42.58:0,43,658	0/0:18,0:18:39.08:0,39,609	0/0:35,0:35:99:0,102,1746	0/0:15,0:14:24.06:0,24,352	0/0:25,0:25:72.23:0,72,1236	0/0:21,0:21:57.12:0,57,706	0/0:16,0:16:48.16:0,48,826
chr10	89297585	.	T	TTGTGAGGCACA	36664.83	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-7.581;DP=565;FS=5.728;HRun=0;HaplotypeScore=202.1103;InbreedingCoeff=0.9971;MQ=49.92;MQ0=4;MQRankSum=-16.366;QD=125.14;ReadPosRankSum=1.319;VQSLOD=4.5727;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,16:25:60.21:3203,60,0	1/1:4,5:10:24.08:1340,24,0	0/0:28,0:25:66.18:0,66,2024	0/0:22,0:18:25.79:0,26,1307	1/1:12,6:18:18.06:1018,18,0	0/0:24,0:24:63.20:0,63,1956	0/0:18,0:18:54.18:0,54,1741	1/1:16,3:28:81.23:3228,81,0	1/1:4,19:25:69.24:3679,69,0	0/0:20,0:20:51.18:0,51,1747	0/0:15,0:15:39.13:0,39,1251	1/1:7,15:21:60.21:3291,60,0	0/0:18,0:18:51.13:0,51,1605	1/1:6,8:15:39.13:1830,39,0	1/1:12,17:30:81.28:4433,81,0	0/0:19,0:19:54.19:0,54,1845	1/1:2,7:10:21.07:1082,21,0	1/1:3,5:8:21.07:1134,21,0	1/1:15,6:21:51.17:2626,51,0	1/1:2,9:12:27.09:1532,27,0	0/0:33,0:32:81.23:0,81,2700	1/1:8,11:19:39.13:2178,39,0	0/0:14,0:14:42.14:0,42,1285	0/0:27,0:27:72.25:0,72,2423	1/1:5,9:14:33.11:1847,33,0	0/0:20,0:20:57.20:0,57,1957	1/1:11,18:32:75.26:4242,75,0	0/0:14,0:14:42.14:0,42,1415
chr10	89297634	.	ATTT	A	314.58	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=2.285;DP=382;FS=6.061;HRun=14;HaplotypeScore=97.8428;InbreedingCoeff=0.5498;MQ=52.81;MQ0=2;MQRankSum=0.077;QD=14.98;ReadPosRankSum=1.908;VQSLOD=2.6246;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:0:0,0,0	0/0:3,0:3:0:0,0,0	0/0:12,0:7:6.90:0,7,73	0/0:14,0:10:8.49:0,8,49	./.	0/0:29,0:29:80.82:0,81,1380	0/0:17,0:19:47.11:0,47,719	0/0:17,0:15:0:0,0,1	0/0:10,0:10:0:0,0,0	0/0:21,0:22:54.59:0,55,804	0/0:20,0:20:54.11:0,54,867	0/0:10,0:10:0:0,0,0	0/0:16,0:18:33.09:0,33,574	0/0:6,0:6:0:0,0,0	0/0:15,0:15:0:0,0,0	0/0:19,0:19:45.09:0,45,678	0/0:6,0:6:0:0,0,0	0/0:7,0:6:0:0,0,0	0/0:10,0:10:0:0,0,0	0/0:4,0:4:0:0,0,0	1/1:4,17:20:35.94:402,36,0	0/0:6,0:6:0:0,0,0	0/0:10,0:12:24.04:0,24,383	0/0:33,0:34:84.01:0,84,1457	0/0:6,0:6:0:0,0,0	0/0:20,0:21:60.14:0,60,965	0/0:14,0:14:0:0,0,0	0/0:12,0:14:42.08:0,42,665
chr10	89298061	.	CAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	C	5738.10	PASS	AB=0.844;AC=22;AF=0.440;AN=50;BaseQRankSum=5.117;DP=479;FS=23.729;HRun=0;HaplotypeScore=319.6754;InbreedingCoeff=0.5478;MQ=67.08;MQ0=6;MQRankSum=-3.494;QD=26.81;ReadPosRankSum=1.351;VQSLOD=2.3758;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:27:42.16:534,0,42	./.	0/1:27,0:19:28.60:29,0,372	0/0:39,0:17:24.08:0,24,663	./.	0/0:18,0:18:30:0,30,2227	0/0:18,0:17:36.12:0,36,2618	1/1:15,0:15:6.02:106,6,0	1/1:14,0:14:12.04:423,12,0	0/0:20,0:20:33.11:0,33,2433	0/0:9,0:9:9.03:0,9,654	1/1:11,6:17:3.01:260,3,0	0/0:17,0:18:42.14:0,42,3601	1/1:9,0:9:15.05:608,15,0	1/1:10,11:21:12.04:1038,12,0	0/0:19,0:24:42.14:0,42,1982	0/1:11,10:21:99:248,0,178	0/1:7,0:7:99:157,0,377	1/1:6,7:13:21.03:777,21,0	./.	0/0:29,0:29:57.20:0,57,4181	1/1:8,5:13:6.02:519,6,0	0/0:8,0:8:11.99:0,12,781	0/0:23,0:27:22.01:0,22,2109	1/1:3,7:10:3.01:260,3,0	0/0:20,0:20:42.14:0,42,2923	1/1:9,10:19:9.92:780,10,0	0/0:10,0:10:27.09:0,27,1478
chr10	89298085	.	G	GT	375.16	PASS	AB=0.949;AC=15;AF=0.313;AN=48;BaseQRankSum=6.303;DP=349;FS=3.737;HRun=0;HaplotypeScore=77.8013;InbreedingCoeff=0.5179;MQ=56.99;MQ0=12;MQRankSum=-5.274;QD=4.58;ReadPosRankSum=3.088;VQSLOD=3.0255;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:16,1:14:5.84:39,0,6	./.	0/1:15,0:7:1.87:2,0,111	0/0:44,0:12:23.28:0,23,280	./.	0/0:18,0:18:44.20:0,44,616	0/0:22,0:21:51.16:0,51,678	./.	1/1:0,2:2:6.02:91,6,0	0/0:16,0:16:39.07:0,39,502	0/0:10,0:9:11.53:0,12,139	1/1:6,0:6:0.47:1,0,0	0/0:20,0:20:48.07:0,48,596	1/1:3,1:3:9.03:138,9,0	0/1:11,0:11:0.86:3,0,1	0/0:19,0:19:36.11:0,36,481	0/0:12,0:12:6.12:0,6,50	0/1:3,1:4:34.20:34,0,103	1/1:7,0:7:9.03:139,9,0	./.	0/0:35,0:35:78.06:0,78,1062	1/1:5,0:5:6.01:62,6,0	0/0:8,0:8:14.76:0,15,206	0/0:23,0:24:31.64:0,32,401	0/0:7,0:7:2.22:0,2,7	0/0:19,0:19:54.18:0,54,744	0/1:11,0:11:0.27:9,0,0	0/0:9,0:8:21.06:0,21,275
chr10	89298362	.	TG	T	12785.29	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=13.475;DP=625;FS=2.880;HRun=1;HaplotypeScore=68.7322;InbreedingCoeff=0.9988;MQ=88.10;MQ0=0;MQRankSum=-5.309;QD=38.86;ReadPosRankSum=4.039;VQSLOD=5.5684;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:42:99:1569,117,0	1/1:0,7:7:18.06:252,18,0	0/0:21,0:21:60.18:0,60,894	0/0:28,0:28:78.15:0,78,1086	1/1:0,31:31:90.30:1258,90,0	0/0:19,0:19:57.18:0,57,888	0/0:25,0:25:75.26:0,75,1193	1/1:0,27:27:81.24:1085,81,0	1/1:0,16:16:45.15:629,45,0	0/0:26,0:26:78.26:0,78,1228	0/0:13,0:13:39.13:0,39,623	1/1:0,11:11:33.11:455,33,0	0/0:18,0:18:51.17:0,51,815	1/1:0,19:19:51.13:691,51,0	1/1:0,14:14:42.10:565,42,0	0/0:15,0:15:45.15:0,45,719	1/1:0,44:44:99:1547,111,0	1/1:0,18:18:51.17:713,51,0	1/1:0,26:26:78.23:1048,78,0	1/1:0,16:16:48.08:628,48,0	0/0:37,0:37:99:0,111,1723	1/1:0,15:15:45.06:585,45,0	0/0:12,0:12:36.11:0,36,551	0/0:40,0:40:99:0,120,1782	1/1:0,21:21:60.20:839,60,0	0/0:30,0:30:90.29:0,90,1396	1/1:1,21:22:66.22:921,66,0	0/0:12,0:12:33.11:0,33,527
chr10	89298444	.	G	GAGCGCTTGCCTAGCA	13785.09	PASS	AC=28;AF=0.519;AN=54;BaseQRankSum=3.870;DP=395;FS=54.695;HRun=0;HaplotypeScore=153.2484;InbreedingCoeff=0.8681;MQ=48.15;MQ0=8;MQRankSum=-12.151;QD=82.05;ReadPosRankSum=-3.636;VQSLOD=2.3998;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,6:23:33.11:1650,33,0	1/1:4,1:4:6.02:320,6,0	0/0:6,0:2:2.97:0,3,44	0/0:6,0:3:3.01:0,3,131	1/1:7,1:8:6.02:338,6,0	0/0:19,0:19:51.12:0,51,1711	0/0:21,0:21:51.13:0,51,2011	1/1:24,0:21:24.05:896,24,0	1/1:4,4:9:21.07:1524,21,0	0/0:19,0:18:54.19:0,54,2172	0/0:15,0:15:45.15:0,45,1870	1/1:3,3:6:12:519,12,0	0/0:12,0:12:24.08:0,24,997	1/1:10,2:12:30.10:1326,30,0	1/1:4,4:7:15.05:945,15,0	0/0:18,0:18:51.16:0,51,1960	1/1:19,4:20:45.15:2370,45,0	1/1:4,1:5:6:246,6,0	1/1:17,0:15:24.07:727,24,0	./.	0/0:23,0:23:57.20:0,57,2421	1/1:6,1:7:6.02:342,6,0	0/0:17,0:17:48.16:0,48,2083	0/0:23,0:23:63.22:0,63,2506	1/1:4,2:6:6.02:178,6,0	0/0:22,0:22:63.17:0,63,2517	1/1:8,7:15:36.12:2405,36,0	0/0:23,0:23:66.23:0,66,2904
chr10	89298493	.	AAG	A	6826.09	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=9.272;DP=521;FS=34.062;HRun=0;HaplotypeScore=82.1787;InbreedingCoeff=0.8927;MQ=51.20;MQ0=10;MQRankSum=-6.211;QD=22.91;ReadPosRankSum=-0.810;VQSLOD=2.8433;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,4:29:60.65:501,61,0	1/1:15,0:14:13.64:62,14,0	0/0:10,0:5:4.05:0,4,144	0/0:8,0:1:3.01:0,3,37	1/1:15,16:31:64.35:906,64,0	0/0:14,0:14:31.90:0,32,472	0/0:21,0:21:59.33:0,59,782	1/1:18,8:25:60.51:649,61,0	1/1:3,7:10:21.04:289,21,0	0/0:19,0:19:35.45:0,35,630	0/0:17,0:17:51.11:0,51,692	1/1:12,5:17:43.66:469,44,0	0/0:16,0:16:44.92:0,45,567	1/1:14,4:18:48.32:511,48,0	0/1:19,0:18:5.35:52,0,5	0/0:22,0:22:65.60:0,66,731	1/1:24,0:22:12.47:144,12,0	1/1:7,7:14:38.83:496,39,0	1/1:13,10:22:61.56:701,62,0	1/1:2,14:16:30.57:414,31,0	0/0:13,0:13:35.92:0,36,336	1/1:8,9:17:42.01:548,42,0	0/0:23,0:22:63.64:0,64,890	0/0:21,0:21:59.84:0,60,834	1/1:9,12:20:39.65:634,40,0	0/0:22,0:22:66.18:0,66,904	1/1:12,6:18:47.76:450,48,0	0/0:17,0:16:27.02:0,27,475
chr10	89298494	.	AG	A	5164.54	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=8.317;DP=518;FS=42.199;HRun=1;HaplotypeScore=82.2263;InbreedingCoeff=0.9535;MQ=52.67;MQ0=10;MQRankSum=-4.197;QD=21.43;ReadPosRankSum=-4.074;VQSLOD=1.6815;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,9:29:75.67:783,76,0	0/0:14,0:13:29.77:0,30,130	0/0:10,1:6:3.88:0,4,112	0/0:8,0:1:3.01:0,3,31	1/1:31,3:34:87.13:706,87,0	0/0:14,0:14:32.78:0,33,387	0/0:22,0:22:35.01:0,35,576	1/1:22,4:25:61.09:502,61,0	1/1:8,2:10:20.95:174,21,0	0/0:20,0:20:38.90:0,39,513	0/0:17,0:17:51.10:0,51,568	1/1:12,5:17:47.72:402,48,0	0/0:15,0:15:44.93:0,45,469	1/1:16,2:18:46.49:356,46,0	0/0:19,0:18:38.04:0,38,183	0/0:22,0:22:57.57:0,58,565	0/0:21,0:20:46.33:0,46,183	1/1:11,3:14:38.95:360,39,0	1/1:19,3:21:62.73:531,63,0	1/1:15,1:16:32.79:254,33,0	0/0:12,0:12:33.24:0,33,200	1/1:15,1:16:42.30:340,42,0	0/0:23,0:22:63.55:0,64,701	0/0:20,0:20:46.41:0,46,614	1/1:18,3:20:37.11:385,37,0	0/0:22,0:22:66.06:0,66,711	1/1:16,2:18:47.60:372,48,0	0/0:17,0:16:22.12:0,22,373
chr10	89298495	.	GAA	G	2790.98	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=8.400;DP=518;FS=7.493;HRun=12;HaplotypeScore=96.5066;InbreedingCoeff=0.4715;MQ=52.80;MQ0=8;MQRankSum=-1.305;QD=9.43;ReadPosRankSum=2.262;VQSLOD=1.9197;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:28.94:29,0,204	1/1:1,13:13:30.06:305,30,0	0/0:11,0:6:13.26:0,13,151	0/0:8,0:1:2.98:0,3,21	0/1:35,0:35:62.23:272,0,62	0/0:14,0:14:32.96:0,33,439	0/0:20,0:22:62.58:0,63,812	0/1:25,0:25:11.93:160,0,12	1/1:10,0:10:17.67:113,18,0	0/0:16,0:20:55.69:0,56,668	0/0:16,0:16:39.12:0,39,561	0/1:17,0:17:37.64:108,0,38	0/0:15,0:15:33.11:0,33,487	0/1:19,0:19:26.10:133,0,26	1/1:5,13:18:36.01:353,36,0	0/0:16,0:21:49.06:0,49,571	1/1:3,18:20:51.10:517,51,0	1/1:14,0:14:1.78:166,2,0	0/1:22,0:21:4.82:184,0,5	1/1:16,0:16:12.22:145,12,0	0/0:0,0:11:32.53:0,33,294	1/1:15,0:15:15.59:198,16,0	0/0:21,0:22:57.66:0,58,830	0/0:19,0:21:59.15:0,59,785	1/1:20,0:20:18.97:234,19,0	0/0:23,0:24:66.15:0,66,882	0/1:18,0:19:2.32:71,0,2	0/0:16,0:16:29.29:0,29,374
chr10	89298825	.	CA	C	959.64	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.939;DP=682;FS=0.000;HRun=5;HaplotypeScore=83.3400;InbreedingCoeff=0.9945;MQ=86.29;MQ0=0;MQRankSum=-3.135;QD=26.66;ReadPosRankSum=1.074;VQSLOD=3.4087;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:36:93.26:1055,93,0	0/0:15,0:15:39.10:0,39,501	0/0:27,0:26:59.67:0,60,789	0/0:31,0:30:52.95:0,53,973	0/0:18,0:18:39.12:0,39,517	0/0:16,0:16:45.15:0,45,615	0/0:23,0:23:66.20:0,66,886	0/0:37,0:37:99:0,102,1395	0/0:26,0:26:72.24:0,72,985	0/0:18,0:18:51.16:0,51,671	0/0:10,0:10:27.07:0,27,339	0/0:34,0:34:99:0,99,1338	0/0:24,0:24:69.22:0,69,928	0/0:31,0:31:87.27:0,87,1160	0/0:31,0:31:90.30:0,90,1231	0/0:31,0:31:87.28:0,87,1174	0/0:36,0:36:99:0,108,1461	0/0:23,0:23:69.19:0,69,923	0/0:26,0:26:78.25:0,78,1052	0/0:10,0:10:24.06:0,24,298	0/0:24,0:24:69.21:0,69,913	0/0:16,0:16:39.12:0,39,513	0/0:12,0:12:33.11:0,33,451	0/0:40,0:40:99:0,111,1519	0/0:17,0:17:48.10:0,48,611	0/0:31,0:31:90.30:0,90,1231	0/0:27,0:27:75.25:0,75,1025	0/0:11,0:11:24.08:0,24,329
chr10	89299360	.	CGTTTTTTTTTTTTTTTT	C	10417.37	PASS	AB=0.750;AC=29;AF=0.518;AN=56;BaseQRankSum=12.352;DP=462;FS=8.548;HRun=0;HaplotypeScore=220.5211;InbreedingCoeff=0.8640;MQ=65.45;MQ0=15;MQRankSum=-9.033;QD=43.77;ReadPosRankSum=9.580;VQSLOD=2.0686;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,11:29:28.89:1191,29,0	1/1:6,0:8:2.75:91,3,0	0/0:32,0:12:32.94:0,33,632	0/0:31,0:14:30.40:0,30,762	1/1:6,2:11:8.69:339,9,0	0/0:13,0:13:30.06:0,30,1903	0/0:16,0:16:45.07:0,45,2346	1/1:22,4:26:7.01:270,7,0	1/1:8,13:21:26.39:1122,26,0	0/0:19,0:19:57.17:0,57,2819	0/0:17,0:17:42.06:0,42,1645	1/1:9,10:19:23.38:997,23,0	0/0:16,0:15:38.76:0,39,1191	1/1:5,10:15:29.63:1246,30,0	1/1:2,0:10:20.92:631,21,0	0/0:17,0:16:45.10:0,45,2545	0/1:10,0:15:25.07:236,0,25	1/1:4,6:10:17.81:748,18,0	1/1:9,5:14:15.30:562,15,0	1/1:9,10:20:19.21:738,19,0	0/0:9,0:9:27.08:0,27,1056	1/1:9,3:12:8.30:373,8,0	0/0:8,0:8:15.03:0,15,713	0/0:15,0:15:33.03:0,33,2079	1/1:3,5:8:14.87:623,15,0	0/0:19,0:18:53.36:0,53,2441	1/1:6,12:17:29.78:1247,30,0	0/0:10,0:9:24.08:0,24,1378
chr10	89301049	.	GC	G	2137.55	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.823;DP=633;FS=5.194;HRun=5;HaplotypeScore=81.5723;InbreedingCoeff=0.9986;MQ=84.10;MQ0=0;MQRankSum=-2.149;QD=28.13;ReadPosRankSum=-2.915;VQSLOD=2.5858;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,123,1565	0/0:9,0:9:27.09:0,27,366	0/0:22,0:22:54.17:0,54,709	0/0:17,0:17:38.47:0,38,499	0/0:15,0:15:35.84:0,36,472	0/0:23,0:23:66.22:0,66,901	0/0:30,0:30:75.23:0,75,994	1/1:4,20:24:60.16:669,60,0	0/0:25,0:25:72.24:0,72,981	0/0:19,0:17:48.16:0,48,646	0/0:8,0:8:24.06:0,24,299	0/0:22,0:22:66.21:0,66,887	0/0:26,0:26:75.19:0,75,957	0/0:22,0:22:66.20:0,66,884	0/0:40,0:40:99:0,114,1522	0/0:19,0:19:57.19:0,57,780	0/0:46,0:46:99:0,123,1654	0/0:18,0:18:54.16:0,54,721	1/1:4,14:18:51.11:551,51,0	1/1:1,9:10:27.06:296,27,0	0/0:50,0:50:99:0,138,1883	0/0:15,0:15:39.13:0,39,531	0/0:15,0:15:42.14:0,42,566	0/0:22,0:22:63.20:0,63,845	0/0:11,0:11:30.10:0,30,408	0/0:24,0:24:69.20:0,69,899	1/1:0,24:24:69.20:782,69,0	0/0:12,0:12:36.12:0,36,492
chr10	89301121	.	C	CG	5736.42	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=17.188;DP=642;FS=7.047;HRun=0;HaplotypeScore=103.6957;InbreedingCoeff=0.9987;MQ=90.84;MQ0=0;MQRankSum=-12.261;QD=40.97;ReadPosRankSum=-0.682;VQSLOD=4.3216;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,46:47:99:1956,126,0	0/0:9,0:9:27.09:0,27,377	0/0:30,0:29:84.24:0,84,1125	0/0:29,0:29:75.21:0,75,926	0/0:17,0:17:51.15:0,51,689	0/0:16,0:16:48.15:0,48,654	0/0:23,0:23:66.20:0,66,904	1/1:4,20:24:63.16:928,63,0	0/0:28,0:28:84.28:0,84,1171	0/0:19,0:19:57.19:0,57,797	0/0:10,0:10:30.09:0,30,403	0/0:21,0:21:60.17:0,60,804	0/0:23,0:23:69.23:0,69,965	0/0:20,0:20:60.20:0,60,839	0/0:27,0:27:81.27:0,81,1132	0/0:22,0:22:66.21:0,66,906	0/0:28,0:28:84.25:0,84,1155	0/0:22,0:22:63.21:0,63,879	1/1:4,25:29:81.21:1198,81,0	1/1:0,19:19:48.14:684,48,0	0/0:45,0:45:99:0,135,1868	0/0:16,0:16:45.15:0,45,629	0/0:15,0:15:45.15:0,45,628	0/0:28,0:28:84.26:0,84,1156	0/0:17,0:17:51.16:0,51,696	0/0:30,0:30:87.29:0,87,1217	1/1:1,20:20:63.19:970,63,0	0/0:7,0:7:21.07:0,21,290
chr10	89301273	.	AC	A	2929.55	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.731;DP=527;FS=5.489;HRun=5;HaplotypeScore=77.6505;InbreedingCoeff=0.9984;MQ=88.24;MQ0=0;MQRankSum=-2.477;QD=28.17;ReadPosRankSum=2.792;VQSLOD=4.1333;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:72.17:0,72,943	0/0:11,0:11:27.09:0,27,362	0/0:19,0:19:51.03:0,51,648	0/0:27,0:27:71.96:0,72,876	1/1:1,17:18:51.06:548,51,0	0/0:16,0:16:45.15:0,45,615	0/0:14,0:14:39.13:0,39,533	0/0:21,0:21:57.17:0,57,735	1/1:0,23:23:60.17:680,60,0	0/0:19,0:19:51.16:0,51,681	0/0:16,0:16:42.13:0,42,556	1/1:2,7:9:21.06:236,21,0	0/0:24,0:24:66.21:0,66,886	1/1:0,12:12:36.10:408,36,0	0/0:23,0:23:66.21:0,66,885	0/0:21,0:21:63.20:0,63,846	0/0:27,0:27:81.21:0,81,1069	1/1:1,19:20:48.13:543,48,0	0/0:20,0:20:48.14:0,48,638	0/0:17,0:17:48.16:0,48,630	0/0:21,0:21:54.12:0,54,699	1/1:0,10:10:27.08:306,27,0	0/0:15,0:15:42.14:0,42,574	0/0:32,0:32:86.78:0,87,1167	1/1:0,12:12:36.10:408,36,0	0/0:22,0:22:54.17:0,54,724	0/0:18,0:18:48.14:0,48,630	0/0:8,0:8:24.03:0,24,278
chr10	89301322	.	TC	T	4158.21	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=12.660;DP=427;FS=19.559;HRun=1;HaplotypeScore=79.8047;InbreedingCoeff=0.9829;MQ=69.86;MQ0=2;MQRankSum=-7.819;QD=24.75;ReadPosRankSum=-1.543;VQSLOD=2.0973;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:19:33.07:435,33,0	0/0:10,0:8:24.08:0,24,345	0/0:25,0:14:34.87:0,35,421	0/0:26,0:19:37.43:0,37,518	1/1:12,0:12:23.83:157,24,0	0/0:11,0:11:33.08:0,33,444	0/0:10,0:10:30.08:0,30,405	1/1:5,10:15:45.11:557,45,0	1/1:8,0:8:22.17:171,22,0	0/0:17,0:17:51.17:0,51,744	0/0:19,0:19:54.16:0,54,743	1/1:7,0:7:10.91:102,11,0	0/0:21,0:21:56.37:0,56,747	1/1:6,1:7:17.89:138,18,0	0/0:12,0:12:35.96:0,36,450	0/0:16,0:16:48.15:0,48,679	0/0:17,0:16:39.03:0,39,508	1/1:12,0:12:18.16:132,18,0	1/1:0,21:21:56.74:712,57,0	1/1:1,25:26:75.21:1015,75,0	0/0:5,0:5:15.04:0,15,199	1/1:7,0:7:11.09:64,11,0	0/0:8,0:8:24.06:0,24,317	0/0:23,0:23:69.09:0,69,933	1/1:15,0:15:25.75:178,26,0	0/0:29,0:29:87.29:0,87,1258	1/1:7,10:16:42.04:496,42,0	0/0:10,0:9:27.06:0,27,371
chr10	89301333	.	TC	T	2634.38	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=13.611;DP=417;FS=8.875;HRun=1;HaplotypeScore=85.4576;InbreedingCoeff=0.8844;MQ=59.56;MQ0=9;MQRankSum=-11.097;QD=14.40;ReadPosRankSum=-4.171;VQSLOD=1.2142;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:21:30.55:173,31,0	0/0:7,0:5:12.03:0,12,136	0/0:23,0:12:35.05:0,35,418	0/0:21,0:14:32.54:0,33,394	1/1:12,0:12:25.89:161,26,0	0/0:13,0:12:32.42:0,32,431	0/0:12,0:10:30.10:0,30,439	1/1:6,8:13:38.95:400,39,0	1/1:6,0:5:10.27:81,10,0	0/0:19,0:18:54.18:0,54,803	0/0:19,0:19:54.17:0,54,782	1/1:9,1:10:13.02:93,13,0	0/0:19,0:19:51.17:0,51,744	1/1:8,1:9:17.20:107,17,0	0/1:10,0:10:40.25:40,0,118	0/0:14,0:14:42.09:0,42,598	0/0:13,0:12:26.87:0,27,276	1/1:16,0:14:24.64:178,25,0	1/1:4,12:15:39.01:411,39,0	1/1:2,24:26:77.60:690,78,0	0/0:1,0:1:3:0,3,25	1/1:10,0:8:17.30:123,17,0	0/0:9,0:9:26.95:0,27,347	0/0:25,0:25:72.19:0,72,1016	1/1:14,0:13:16.35:102,16,0	0/0:28,0:28:84.27:0,84,1218	1/1:4,12:15:31.63:299,32,0	0/0:11,0:10:27.04:0,27,371
chr10	89301338	.	C	CT	882.58	PASS	AB=1.000;AC=27;AF=0.500;AN=54;BaseQRankSum=11.189;DP=430;FS=1.861;HRun=3;HaplotypeScore=98.4830;InbreedingCoeff=0.7294;MQ=57.94;MQ0=13;MQRankSum=-8.513;QD=4.35;ReadPosRankSum=-2.802;VQSLOD=-0.5743;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:23:7.96:54,8,0	0/1:6,0:4:0:0,0,0	0/0:20,0:9:5.37:0,5,171	0/0:20,0:13:5.49:0,5,117	1/1:13,0:13:6.80:41,7,0	0/0:14,0:13:33.05:0,33,393	0/0:13,0:11:24.06:0,24,270	1/1:11,2:11:15.69:106,16,0	1/1:6,0:5:2.49:9,2,0	0/0:18,0:17:48.14:0,48,565	0/0:19,0:18:51.15:0,51,600	1/1:12,0:12:3.54:12,4,0	0/0:22,0:22:51.12:0,51,579	0/0:12,0:12:0.88:0,1,4	1/1:10,0:10:6.10:26,6,0	0/0:15,0:15:39.12:0,39,464	1/1:13,0:12:0.05:1,0,0	1/1:18,0:14:1.36:4,1,0	1/1:7,7:13:29.56:226,30,0	1/1:14,14:28:66.69:423,67,0	./.	1/1:11,0:9:4.70:22,5,0	0/0:9,0:9:26.91:0,27,288	0/0:27,0:27:69.21:0,69,816	1/1:17,0:16:2.07:7,2,0	0/0:27,0:27:78.06:0,78,884	1/1:13,2:14:25.28:133,25,0	0/0:11,0:10:26.78:0,27,285
chr10	89301341	.	TC	T	1205.72	PASS	AB=0.931;AC=29;AF=0.537;AN=54;BaseQRankSum=11.259;DP=406;FS=0.992;HRun=1;HaplotypeScore=82.7950;InbreedingCoeff=0.8378;MQ=56.73;MQ0=13;MQRankSum=-9.251;QD=6.45;ReadPosRankSum=-2.749;VQSLOD=-0.4879;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:24:31.67:193,32,0	1/1:6,0:4:2.24:5,2,0	0/0:19,0:8:16.64:0,17,176	0/0:19,0:12:16.70:0,17,107	1/1:11,0:11:15.11:89,15,0	0/0:15,0:14:8.57:0,9,271	0/0:14,0:12:30.46:0,30,309	1/1:8,1:7:8.25:52,8,0	1/1:6,0:5:14.63:94,15,0	0/0:19,0:18:47.59:0,48,437	0/0:19,0:18:34.97:0,35,447	1/1:10,0:10:21.58:136,22,0	0/0:22,0:22:52.34:0,52,465	1/1:10,0:10:16.38:97,16,0	1/1:9,0:9:17.85:103,18,0	0/0:14,0:14:40.57:0,41,379	1/1:12,0:11:14.46:79,14,0	1/1:12,0:8:19.45:136,19,0	1/1:11,1:11:3.15:50,3,0	0/1:25,2:27:42.83:43,0,60	./.	1/1:11,0:9:23.65:154,24,0	0/0:9,0:9:19.66:0,20,170	0/0:31,0:31:63.64:0,64,637	1/1:10,0:9:20.24:128,20,0	0/0:27,0:27:74.77:0,75,764	1/1:14,1:13:10.80:62,11,0	0/0:11,0:10:26.91:0,27,247
chr10	89301454	.	C	CCGA	3602.63	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-2.033;DP=514;FS=7.268;HRun=0;HaplotypeScore=87.3323;InbreedingCoeff=0.9927;MQ=75.54;MQ0=0;MQRankSum=-7.073;QD=26.30;ReadPosRankSum=-2.219;VQSLOD=2.8641;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:78.18:0,78,1099	1/1:4,0:8:15.05:208,15,0	0/0:15,0:14:29.42:0,29,346	0/0:20,0:20:33.07:0,33,453	0/0:15,0:15:32.93:0,33,398	0/0:11,0:11:27.07:0,27,383	0/0:29,0:29:66.21:0,66,962	1/1:10,16:27:57.06:932,57,0	0/0:19,0:19:39.06:0,39,556	0/0:19,0:19:39.13:0,39,568	0/0:14,0:14:30.09:0,30,429	0/0:17,0:17:45.10:0,45,626	0/0:21,0:21:45.14:0,45,655	0/0:18,0:18:36.12:0,36,537	1/1:4,0:9:15.02:180,15,0	0/0:16,0:16:42.14:0,42,628	1/1:10,1:24:33.09:430,33,0	0/0:28,0:28:81.21:0,81,1123	1/1:6,8:15:27.07:487,27,0	1/1:6,10:16:27.09:564,27,0	1/1:13,0:22:20.74:266,21,0	0/0:22,0:22:57.18:0,57,826	0/0:17,0:17:39.12:0,39,564	0/0:19,0:19:45.15:0,45,673	0/0:13,0:13:33.11:0,33,493	0/0:13,0:13:30.10:0,30,448	1/1:5,11:15:27.09:535,27,0	0/0:16,0:16:42.14:0,42,628
chr10	89302138	.	TTAGGGAGGAGGGAA	T	16999.12	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=14.017;DP=438;FS=2.429;HRun=0;HaplotypeScore=173.8220;InbreedingCoeff=0.9600;MQ=83.38;MQ0=0;MQRankSum=-15.173;QD=78.70;ReadPosRankSum=4.236;VQSLOD=4.6476;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:45.15:1897,45,0	1/1:0,4:4:12.04:454,12,0	0/0:24,0:24:69.20:0,69,3129	0/0:18,0:17:50.09:0,50,2288	1/1:0,3:3:3.01:133,3,0	0/0:15,0:15:42.14:0,42,2706	0/0:27,0:27:78.27:0,78,5290	1/1:0,6:6:18.06:641,18,0	1/1:0,16:16:24.08:1061,24,0	0/0:27,0:27:81.28:0,81,4716	0/0:9,0:9:27.08:0,27,1757	1/1:0,20:22:57.20:2485,57,0	0/0:17,0:17:51.09:0,51,3249	1/1:0,14:14:36.12:1592,36,0	1/1:0,19:19:39.61:1571,40,0	0/0:24,0:24:72.25:0,72,4389	1/1:0,21:21:12.04:374,12,0	1/1:0,12:12:18.06:796,18,0	1/1:0,8:8:24.06:700,24,0	1/1:0,11:11:21.07:905,21,0	1/1:0,21:22:30.57:1275,31,0	1/1:0,15:15:36.12:1454,36,0	0/0:12,0:12:36.12:0,36,2347	0/0:23,0:23:69.24:0,69,4562	1/1:0,7:7:15.05:604,15,0	0/0:20,0:20:57.20:0,57,3102	1/1:1,12:13:23.89:1058,24,0	0/0:6,0:6:18.06:0,18,1301
chr10	89302907	.	GCTATTC	G	11576.43	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=15.895;DP=628;FS=1.501;HRun=0;HaplotypeScore=165.9407;InbreedingCoeff=0.9988;MQ=87.88;MQ0=0;MQRankSum=-17.045;QD=47.84;ReadPosRankSum=1.827;VQSLOD=5.1136;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:22:33.11:778,33,0	0/0:13,0:13:36.06:0,36,1227	0/0:35,0:35:99:0,102,3331	0/0:26,0:26:76.14:0,76,2625	1/1:0,19:19:24.08:554,24,0	0/0:18,0:18:54.19:0,54,1979	0/0:18,0:18:51.18:0,51,1786	1/1:2,16:18:48.15:1085,48,0	1/1:2,18:21:41.81:1015,42,0	0/0:26,0:26:78.27:0,78,2812	0/0:14,0:14:42.13:0,42,1454	1/1:1,22:23:57.20:1365,57,0	0/0:25,0:25:69.24:0,69,2302	1/1:1,28:29:60.21:1442,60,0	0/0:24,0:24:72.25:0,72,2626	0/0:33,0:33:99:0,99,3585	0/0:24,0:24:69.24:0,69,2529	1/1:0,7:7:21.07:517,21,0	1/1:1,14:15:35.64:852,36,0	1/1:0,24:24:42.14:980,42,0	0/0:35,0:35:99:0,103,3736	1/1:2,20:22:30.10:699,30,0	0/0:13,0:13:39.13:0,39,1423	0/0:23,0:23:69.24:0,69,2529	1/1:0,12:12:27.09:664,27,0	0/0:40,0:40:99:0,117,4230	1/1:2,28:30:66.09:1624,66,0	0/0:18,0:18:54.19:0,54,1931
chr10	89303605	.	TG	T	10531.15	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=16.781;DP=681;FS=6.424;HRun=2;HaplotypeScore=78.3327;InbreedingCoeff=0.9996;MQ=79.41;MQ0=0;MQRankSum=-2.509;QD=35.94;ReadPosRankSum=1.383;VQSLOD=5.3587;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,35:36:99:1283,99,0	0/0:12,0:12:33.11:0,33,487	0/0:12,0:12:33.11:0,33,493	0/0:22,0:22:60.17:0,60,825	1/1:1,28:29:84.19:1063,84,0	0/0:25,0:25:72.19:0,72,1031	0/0:28,0:28:84.24:0,84,1194	1/1:0,28:28:84.26:1076,84,0	1/1:0,23:23:63.20:818,63,0	0/0:30,0:30:90.30:0,90,1347	0/0:21,0:21:63.21:0,63,943	1/1:0,26:26:75.24:974,75,0	0/0:22,0:22:66.21:0,66,964	1/1:0,21:21:57.18:737,57,0	0/0:23,0:23:66.21:0,66,968	0/0:23,0:23:69.22:0,69,1011	0/0:40,0:40:99:0,120,1775	1/1:0,24:24:60.20:779,60,0	1/1:0,23:23:69.22:884,69,0	1/1:1,17:18:48.05:600,48,0	0/0:41,0:41:99:0,120,1774	1/1:0,26:26:69.18:877,69,0	0/0:22,0:22:66.22:0,66,988	0/0:26,0:26:78.24:0,78,1127	1/1:0,16:16:45.15:584,45,0	0/0:33,0:33:99:0,99,1463	1/1:1,22:23:66.21:857,66,0	0/0:8,0:8:24.04:0,24,294
chr10	89303754	.	C	CAT	17879.69	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-19.236;DP=769;FS=0.855;HRun=0;HaplotypeScore=81.1540;InbreedingCoeff=0.9998;MQ=89.15;MQ0=0;MQRankSum=-2.627;QD=54.51;ReadPosRankSum=1.149;VQSLOD=5.4167;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,51:53:99:3107,154,0	0/0:12,0:12:33.11:0,33,534	0/0:32,0:32:96.15:0,96,1440	0/0:24,0:24:64.85:0,65,945	1/1:2,27:29:66.23:1340,66,0	0/0:23,0:23:66.21:0,66,1049	0/0:25,0:25:75.21:0,75,1185	1/1:1,29:30:84.24:1541,84,0	1/1:0,31:31:90.31:1827,90,0	0/0:34,0:34:99:0,102,1637	0/0:12,0:12:36.11:0,36,559	1/1:1,32:33:99:2006,99,0	0/0:28,0:28:81.28:0,81,1317	1/1:1,34:35:90.31:1828,90,0	0/0:27,0:27:78.25:0,78,1245	0/0:34,1:35:41.41:0,41,1543	0/0:26,0:26:75.17:0,75,1158	1/1:0,17:17:48.16:975,48,0	1/1:1,22:24:72.24:1364,72,0	1/1:0,18:18:51.18:1036,51,0	0/0:50,0:50:99:0,147,2265	1/1:2,22:24:57.20:1157,57,0	0/0:18,0:18:54.17:0,54,854	0/0:36,0:36:99:0,108,1726	1/1:0,11:11:27.09:548,27,0	0/0:41,0:41:99:0,120,1931	1/1:0,21:23:57.20:1150,57,0	0/0:18,0:18:51.17:0,51,831
chr10	89303961	.	T	TTG	1380.86	PASS	AB=0.906;AC=21;AF=0.404;AN=52;BaseQRankSum=-3.173;DP=671;FS=5.449;HRun=0;HaplotypeScore=114.3938;InbreedingCoeff=0.3718;MQ=60.60;MQ0=11;MQRankSum=1.462;QD=3.88;ReadPosRankSum=-1.649;VQSLOD=2.2703;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:29:10.77:0,11,44	1/1:6,0:6:2.98:22,3,0	./.	0/1:27,0:18:0:0,0,0	0/1:24,1:26:34.52:55,0,35	0/0:19,0:20:32.58:0,33,299	0/0:27,0:28:30.38:0,30,306	1/1:25,0:23:6.11:29,6,0	0/1:15,11:28:75.25:319,0,75	0/0:23,0:27:10.47:0,10,72	0/0:15,0:17:8.89:0,9,80	0/1:25,7:32:0.29:326,0,0	0/0:14,0:17:17.86:0,18,168	1/1:19,4:26:9.02:115,9,0	1/1:28,0:28:8:67,8,0	0/0:17,0:19:23.72:0,24,222	./.	0/1:15,2:17:68.24:173,0,68	0/1:26,1:27:31.35:35,0,31	0/0:27,0:26:17.39:0,17,134	1/1:42,0:42:12.60:142,13,0	1/1:12,8:21:1.94:123,2,0	0/0:22,0:22:14.55:0,15,143	0/0:32,0:36:44.06:0,44,388	1/1:12,4:18:6.02:89,6,0	0/1:32,0:32:53.91:54,0,111	0/0:30,0:30:7.10:0,7,183	0/0:8,0:7:15.03:0,15,156
chr10	89304067	.	GACCAGGCTGGCCTCAA	G	5876.63	PASS	AB=0.650;AC=9;AF=0.161;AN=56;BaseQRankSum=11.427;DP=596;FS=49.645;HRun=0;HaplotypeScore=260.2460;InbreedingCoeff=0.8502;MQ=56.95;MQ0=2;MQRankSum=-8.048;QD=55.97;ReadPosRankSum=-0.133;VQSLOD=2.7789;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,18:29:27.02:1275,27,0	0/0:12,0:12:36.12:0,36,2650	0/0:18,0:10:24.08:0,24,1088	0/0:36,0:23:54.04:0,54,2264	0/0:16,0:16:37.90:0,38,2271	0/0:22,0:22:66.23:0,66,4969	0/0:32,0:32:96.33:0,96,6788	0/1:12,14:25:99:605,0,152	0/0:22,0:22:63.22:0,63,4590	0/0:16,0:16:45.15:0,45,3302	0/0:14,0:14:42.14:0,42,2916	0/0:18,0:18:51.17:0,51,3410	0/0:16,0:16:45.63:0,46,3099	0/0:20,0:20:60.21:0,60,4363	0/0:20,0:20:60.21:0,60,4476	0/0:27,0:27:81.25:0,81,6089	0/0:30,0:30:84.29:0,84,6148	0/0:21,0:21:63.22:0,63,4610	1/1:5,11:16:33.02:970,33,0	1/1:2,4:6:9.03:331,9,0	0/0:40,0:40:99:0,109,7578	0/0:16,0:16:48.12:0,48,2980	0/0:12,0:12:36.11:0,36,2103	0/0:31,0:31:93.32:0,93,6836	0/0:20,0:20:57.20:0,57,3588	0/0:23,0:23:69.24:0,69,5166	1/1:5,23:28:56.83:2695,57,0	0/0:9,0:9:27.09:0,27,2139
chr10	89304785	.	GGTGTGT	G	7758.65	PASS	AB=0.773;AC=24;AF=0.429;AN=56;BaseQRankSum=8.108;DP=566;FS=1.797;HRun=0;HaplotypeScore=140.0334;InbreedingCoeff=0.8593;MQ=60.47;MQ0=2;MQRankSum=-13.230;QD=31.54;ReadPosRankSum=2.305;VQSLOD=4.7751;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,11:16:30.10:648,30,0	0/0:3,0:10:18.06:0,18,476	0/0:32,0:20:42.14:0,42,1223	0/0:17,0:10:15.92:0,16,420	1/1:10,12:23:36.08:710,36,0	0/0:21,0:21:57.20:0,57,1871	0/0:24,0:25:48.16:0,48,1501	1/1:12,17:29:45.14:910,45,0	1/1:3,10:13:24.08:518,24,0	0/0:16,0:18:48.16:0,48,1349	0/0:17,0:17:36.12:0,36,1088	1/1:1,12:13:23.55:473,24,0	0/1:20,2:22:7.60:8,0,1642	1/1:5,9:14:27.09:583,27,0	0/0:5,0:21:45.13:0,45,1154	0/0:31,1:32:22.51:0,23,2644	0/0:10,0:26:60.21:0,60,1575	0/1:7,10:17:62.04:244,0,62	1/1:10,12:22:36.09:691,36,0	1/1:3,15:18:33.11:713,33,0	0/0:11,0:28:48.15:0,48,1239	1/1:5,10:15:20.74:446,21,0	0/0:18,0:19:45.15:0,45,1409	0/0:18,0:20:48.16:0,48,1442	1/1:4,16:20:36.12:778,36,0	0/0:24,0:23:60.20:0,60,1935	1/1:7,17:24:48.16:1037,48,0	0/0:2,0:9:21.07:0,21,555
chr10	89304788	.	GTGTGT	G	2469.78	PASS	AB=0.978;AC=15;AF=0.268;AN=56;BaseQRankSum=15.226;DP=557;FS=2.807;HRun=0;HaplotypeScore=144.3683;InbreedingCoeff=0.1788;MQ=60.42;MQ0=3;MQRankSum=-14.696;QD=11.76;ReadPosRankSum=5.027;VQSLOD=2.3406;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:5.09:226,0,5	0/0:9,0:9:21.07:0,21,507	0/0:39,0:23:60.12:0,60,1610	0/0:20,0:12:26.99:0,27,583	0/1:21,1:22:83.45:245,0,83	0/0:19,0:19:57.20:0,57,1868	0/0:23,0:23:60.19:0,60,1646	0/1:28,1:29:99:266,0,381	1/1:11,0:11:24:207,24,0	0/0:18,0:18:54.18:0,54,1591	0/0:17,0:17:48.16:0,48,1320	1/1:13,0:13:5:162,5,0	0/0:22,0:22:37.30:0,37,1823	0/1:12,0:12:43.46:201,0,43	0/0:22,0:22:54.18:0,54,1342	0/0:31,0:31:67.39:0,67,2789	0/0:25,0:25:66.23:0,66,1668	0/1:17,0:17:73.71:74,0,220	0/1:18,0:18:99:200,0,205	1/1:17,0:17:32.99:285,33,0	0/0:27,0:27:66.17:0,66,1457	0/1:13,2:15:45.35:147,0,45	0/0:22,0:22:54.18:0,54,1610	0/0:21,0:21:54.18:0,54,1548	0/1:19,0:19:34.63:269,0,35	0/0:23,0:22:66.23:0,66,2056	0/1:22,0:22:57.51:358,0,58	0/0:9,0:9:27.07:0,27,610
chr10	89305308	.	G	GAGCGCTTGCCTAGCAA	27655.77	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-11.353;DP=455;FS=4.827;HRun=0;HaplotypeScore=159.0342;InbreedingCoeff=0.9974;MQ=59.77;MQ0=1;MQRankSum=-15.023;QD=163.64;ReadPosRankSum=5.306;VQSLOD=5.1601;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:18:36.12:2739,36,0	0/0:8,0:8:24.08:0,24,1174	0/0:31,0:26:72.21:0,72,2707	0/0:22,0:19:50.95:0,51,2031	1/1:0,15:17:45.15:3588,45,0	0/0:16,0:16:45.15:0,45,2138	0/0:16,0:16:48.16:0,48,2246	1/1:10,0:11:24.08:1194,24,0	1/1:2,7:10:24.08:1770,24,0	0/0:23,0:23:69.24:0,69,3376	0/0:21,0:21:60.18:0,60,2418	1/1:0,17:19:45.15:3621,45,0	0/0:12,0:12:30.10:0,30,1350	1/1:0,10:9:24.08:1933,24,0	0/0:19,0:19:51.65:0,52,2274	0/0:11,0:11:33.10:0,33,1421	0/0:15,0:15:42.09:0,42,1697	1/1:4,7:12:27.05:1955,27,0	1/1:5,3:10:24.08:1316,24,0	1/1:1,7:10:21.07:1689,21,0	0/0:21,0:21:57.18:0,57,2276	1/1:3,11:15:36.12:2654,36,0	0/0:20,0:20:60.19:0,60,2649	0/0:19,0:19:54.17:0,54,2445	1/1:2,9:11:27.09:2044,27,0	0/0:23,0:23:69.20:0,69,3036	1/1:4,12:19:45.15:3154,45,0	0/0:9,0:9:27.09:0,27,1320
chr10	89305341	.	GAAA	G	406.69	PASS	AB=0.889;AC=9;AF=0.161;AN=56;BaseQRankSum=2.370;DP=527;FS=0.789;HRun=18;HaplotypeScore=114.7758;InbreedingCoeff=0.8243;MQ=57.64;MQ0=3;MQRankSum=2.438;QD=5.02;ReadPosRankSum=6.300;VQSLOD=-0.7496;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:25:40.46:0,40,560	1/1:4,2:8:4.25:56,4,0	0/0:24,0:19:9.77:0,10,65	0/0:16,0:9:8.90:0,9,83	0/0:18,0:18:27.48:0,27,301	0/0:17,0:21:33.02:0,33,374	0/0:15,0:18:26.09:0,26,520	0/0:20,0:22:33.09:0,33,457	0/0:19,0:20:39.08:0,39,489	0/0:21,0:22:28.24:0,28,313	0/0:12,0:14:10.17:0,10,233	0/0:27,0:26:45.08:0,45,608	0/0:14,0:22:45.01:0,45,527	0/0:12,0:13:27.05:0,27,366	1/1:6,7:15:12.85:132,13,0	0/0:7,0:12:27.01:0,27,302	1/1:4,9:15:20.54:181,21,0	0/0:17,0:17:28.65:0,29,390	0/0:16,0:16:35.90:0,36,442	0/0:14,0:14:33.09:0,33,448	1/1:8,10:19:18.10:184,18,0	0/0:21,0:22:48.05:0,48,659	0/0:17,0:18:23.53:0,24,295	0/1:21,2:24:1.80:2,0,659	0/0:18,0:16:36.09:0,36,511	0/0:26,0:26:41.82:0,42,452	0/0:15,0:17:21.05:0,21,286	0/0:10,0:14:22.54:0,23,258
chr10	89305895	.	GTTTTTT	G	5538.30	PASS	AB=0.739;AC=23;AF=0.411;AN=56;BaseQRankSum=6.911;DP=559;FS=11.122;HRun=17;HaplotypeScore=126.0782;InbreedingCoeff=0.8807;MQ=67.80;MQ0=2;MQRankSum=-11.588;QD=22.06;ReadPosRankSum=7.306;VQSLOD=0.5696;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,20:30:26.45:810,26,0	0/0:2,0:2:6.01:0,6,68	0/0:31,0:18:30.10:0,30,520	0/0:27,0:18:27.07:0,27,539	1/1:7,9:17:6.70:164,7,0	0/0:16,0:19:51.16:0,51,1423	0/0:12,0:18:27.09:0,27,780	0/1:11,6:17:47.99:290,0,48	1/1:6,7:14:14.69:261,15,0	0/0:27,0:28:54.18:0,54,1477	0/0:7,0:9:24.08:0,24,678	1/1:12,13:26:26.22:433,26,0	0/0:12,0:12:24.05:0,24,589	1/1:9,14:24:32.39:555,32,0	0/0:19,0:23:55.98:0,56,1090	0/0:20,0:22:50.54:0,51,1300	0/0:10,0:31:65.61:0,66,973	1/1:6,15:24:41.66:678,42,0	1/1:12,10:23:29.34:448,29,0	1/1:6,13:21:26.46:449,26,0	0/0:12,0:22:32.89:0,33,525	1/1:3,5:10:8.20:204,8,0	0/0:11,0:11:24.07:0,24,647	0/0:24,0:27:63.69:0,64,1701	1/1:6,8:16:17.60:356,18,0	0/0:12,0:15:36.12:0,36,960	1/1:4,25:29:50.87:890,51,0	0/0:6,0:6:15.05:0,15,460
chr10	89305907	.	TTTTTTG	T	3111.99	PASS	AB=0.980;AC=13;AF=0.232;AN=56;BaseQRankSum=11.839;DP=534;FS=0.835;HRun=0;HaplotypeScore=128.5496;InbreedingCoeff=-0.0108;MQ=64.80;MQ0=2;MQRankSum=-12.268;QD=13.71;ReadPosRankSum=12.132;VQSLOD=0.9341;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:99:466,0,126	0/0:3,0:3:6:0,6,90	0/0:31,0:16:39.11:0,39,627	0/0:28,0:16:17.70:0,18,552	0/1:16,0:16:77.95:78,0,136	0/0:23,0:23:63.19:0,63,1580	0/0:16,0:16:33.11:0,33,922	0/1:16,0:16:81.32:162,0,81	0/1:10,1:11:1.96:170,0,2	0/0:24,0:24:66.18:0,66,1510	0/0:9,0:9:27.08:0,27,657	1/1:15,0:15:14.08:285,14,0	0/0:7,0:7:21.03:0,21,482	0/1:17,2:19:3.98:400,0,4	0/0:24,0:24:69.05:0,69,1171	0/0:18,0:18:54.14:0,54,1273	0/0:33,0:33:80.81:0,81,1341	0/1:24,1:25:62.17:388,0,62	0/1:20,0:20:99:179,0,131	0/1:18,0:18:62.10:269,0,62	0/0:22,0:22:47.27:0,47,789	0/1:10,0:10:80.16:119,0,80	0/0:15,0:15:44.45:0,44,857	0/0:27,0:27:69.67:0,70,1812	0/1:16,0:16:83.83:202,0,84	0/0:18,0:18:54.14:0,54,1190	0/1:28,0:28:14.81:552,0,15	0/0:9,0:9:24.03:0,24,505
chr10	89307029	.	TTTTG	T	7459.79	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=15.479;DP=665;FS=11.554;HRun=0;HaplotypeScore=112.6816;InbreedingCoeff=0.9491;MQ=64.75;MQ0=2;MQRankSum=0.484;QD=21.44;ReadPosRankSum=1.302;VQSLOD=3.9784;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:78.25:0,78,1739	1/1:2,0:10:15.02:140,15,0	0/0:19,0:13:6.02:0,6,88	0/0:16,0:11:15.04:0,15,235	1/1:9,16:25:44.96:583,45,0	0/0:18,0:18:42.14:0,42,1009	0/0:24,0:24:44.59:0,45,1059	1/1:14,13:27:42.09:574,42,0	1/1:11,18:29:48.16:771,48,0	0/0:37,0:37:87.77:0,88,1972	0/0:20,0:20:54.17:0,54,1223	1/1:11,19:30:39.13:627,39,0	0/0:23,0:23:57.20:0,57,1285	1/1:3,14:17:21.07:337,21,0	1/1:7,0:23:36.01:328,36,0	0/0:17,0:17:42.14:0,42,972	1/1:8,0:26:29.01:248,29,0	1/1:9,19:28:5.12:499,5,0	1/1:12,13:24:33.02:452,33,0	1/1:6,20:26:60.08:880,60,0	1/1:5,0:12:6:54,6,0	1/1:6,15:21:33.03:474,33,0	0/0:21,0:21:51.18:0,51,1188	0/0:39,0:39:81.22:0,81,1809	1/1:6,16:22:26.89:434,27,0	0/0:31,0:31:72.25:0,72,1648	1/1:2,25:27:65.93:1060,66,0	0/0:14,0:14:33.11:0,33,789
chr10	89309146	.	G	GA	5933.89	PASS	AB=0.806;AC=34;AF=0.607;AN=56;BaseQRankSum=-5.012;DP=621;FS=19.118;HRun=11;HaplotypeScore=68.3300;InbreedingCoeff=0.4386;MQ=72.24;MQ0=0;MQRankSum=0.008;QD=12.36;ReadPosRankSum=2.088;VQSLOD=2.8631;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,27:36:34.75:657,35,0	1/1:3,0:7:8.52:43,9,0	0/0:12,0:9:12.49:0,12,77	0/1:10,0:9:8.12:8,0,17	0/1:4,13:18:28.53:290,0,29	0/1:20,2:22:10.16:10,0,287	0/1:20,3:23:1.13:1,0,355	1/1:8,24:33:62.59:576,63,0	1/1:2,27:30:42.02:490,42,0	0/0:22,0:23:55.79:0,56,421	0/1:12,0:12:26.56:27,0,136	1/1:8,24:32:21.85:402,22,0	0/0:30,0:30:41.23:0,41,499	1/1:5,14:20:23.22:304,23,0	1/1:8,3:32:55.11:317,55,0	0/0:21,0:21:41.05:0,41,308	1/1:7,3:30:34.25:187,34,0	0/1:7,18:25:47.72:281,0,48	1/1:3,14:19:27.47:405,27,0	1/1:7,10:17:6.75:218,7,0	1/1:6,23:30:28.17:449,28,0	1/1:7,18:25:3.44:354,3,0	0/0:13,0:13:29.73:0,30,221	0/0:25,1:26:31.95:0,32,416	1/1:2,24:26:63.13:640,63,0	0/0:16,0:16:26.61:0,27,192	0/1:7,17:24:5.09:268,0,5	0/1:7,1:8:7.49:7,0,122
chr10	89310252	.	T	TAC	627.16	PASS	AB=0.932;AC=28;AF=0.538;AN=52;BaseQRankSum=-3.001;DP=618;FS=12.605;HRun=0;HaplotypeScore=100.5375;InbreedingCoeff=0.1427;MQ=61.27;MQ0=8;MQRankSum=-0.247;QD=1.55;ReadPosRankSum=-0.882;VQSLOD=0.6157;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:27:10.72:0,11,49	0/0:8,0:11:5.68:0,6,28	./.	./.	0/1:13,5:18:35.22:35,0,54	0/0:13,0:13:9.02:0,9,97	0/0:24,0:23:14.87:0,15,161	1/1:22,0:22:4.21:23,4,0	0/1:18,4:27:26.23:38,0,26	0/1:16,1:17:27.01:56,0,27	0/0:9,0:9:2.99:0,3,24	1/1:17,2:26:3.01:44,3,0	0/0:12,0:11:3.89:0,4,34	0/1:21,0:21:0:0,0,0	0/0:22,0:27:14.20:0,14,70	0/0:19,0:19:15.03:0,15,161	0/1:21,0:31:15.11:15,0,92	1/1:15,2:19:3.01:44,3,0	1/1:14,0:14:5.23:51,5,0	1/1:6,5:13:6.02:88,6,0	0/1:58,0:60:32.69:33,0,168	1/1:13,5:19:3.01:44,3,0	0/1:13,0:13:17.98:18,0,26	0/1:42,1:43:30.38:30,0,89	1/1:16,6:23:12.04:177,12,0	1/1:15,0:15:2.98:22,3,0	1/1:6,6:15:3.01:44,3,0	1/1:8,0:7:3.44:21,3,0
chr10	89311185	.	TAAAA	T	5478.69	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=7.470;DP=512;FS=0.000;HRun=16;HaplotypeScore=93.6003;InbreedingCoeff=0.9371;MQ=71.03;MQ0=9;MQRankSum=-4.176;QD=17.50;ReadPosRankSum=3.947;VQSLOD=2.5595;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:22:29.81:234,30,0	1/1:1,1:7:17.43:142,17,0	0/0:49,0:19:12.81:0,13,271	0/1:53,0:19:1.56:2,0,121	1/1:4,20:24:56.94:706,57,0	0/0:16,0:20:32.89:0,33,593	0/0:10,0:11:26.95:0,27,438	1/1:9,14:23:43.11:532,43,0	1/1:3,9:12:26.99:355,27,0	0/0:16,0:17:39.04:0,39,568	0/0:7,0:11:30.10:0,30,556	1/1:3,10:13:21.69:343,22,0	0/0:7,0:8:21:0,21,329	1/1:3,8:11:17.97:237,18,0	1/1:6,0:27:53.60:422,54,0	0/0:17,0:17:39.13:0,39,853	1/1:1,0:26:59.81:464,60,0	1/1:3,9:12:20.91:237,21,0	1/1:3,10:13:33.03:390,33,0	1/1:0,12:12:26.72:307,27,0	1/1:3,0:10:8.93:68,9,0	1/1:1,5:6:15:182,15,0	0/0:14,0:15:36.05:0,36,599	0/0:8,0:9:21.06:0,21,424	1/1:1,17:18:39.09:486,39,0	0/0:24,0:26:63.16:0,63,967	1/1:9,11:22:29.80:372,30,0	0/0:11,0:12:30.07:0,30,567
chr10	89311198	.	AAAAG	A	1922.67	PASS	AB=0.984;AC=24;AF=0.429;AN=56;BaseQRankSum=12.872;DP=490;FS=10.757;HRun=0;HaplotypeScore=100.3880;InbreedingCoeff=0.2346;MQ=65.87;MQ0=7;MQRankSum=-5.887;QD=6.43;ReadPosRankSum=8.051;VQSLOD=0.3108;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:52.92:53,0,72	1/1:6,0:6:8.50:44,9,0	0/0:42,0:13:20.17:0,20,275	0/1:45,0:19:10.18:10,0,130	1/1:21,0:21:52.47:360,52,0	0/0:15,0:15:28.17:0,28,569	0/0:14,0:14:35.90:0,36,451	0/1:22,1:22:83.24:213,0,83	1/1:10,0:10:4.89:166,5,0	0/0:20,0:20:43:0,43,704	0/0:11,0:11:30.10:0,30,578	0/1:16,1:17:49.35:162,0,49	0/0:13,0:13:28.27:0,28,368	0/1:11,0:11:47.51:93,0,48	1/1:21,0:21:39.23:140,39,0	0/0:14,0:14:39.05:0,39,851	1/1:27,0:27:4.45:90,4,0	0/1:11,0:11:22.71:71,0,23	0/1:15,1:16:91.33:125,0,91	0/1:15,0:15:53.99:100,0,54	0/1:9,0:9:3.62:4,0,10	0/1:7,0:7:27.61:85,0,28	0/0:16,0:15:33.39:0,33,593	0/0:8,0:8:18.06:0,18,389	1/1:19,0:18:19.59:202,20,0	0/0:25,0:25:59.86:0,60,961	1/1:15,2:17:8.17:195,8,0	0/0:13,0:13:36.07:0,36,661
chr10	89312013	.	TTATTA	T	1383.93	PASS	AC=6;AF=0.120;AN=50;BaseQRankSum=5.102;DP=274;FS=1.707;HRun=0;HaplotypeScore=59.5867;InbreedingCoeff=0.6583;MQ=91.48;MQ0=3;MQRankSum=-3.285;QD=41.94;ReadPosRankSum=2.998;VQSLOD=3.1281;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:36.06:0,36,902	1/1:1,1:2:6.02:85,6,0	0/0:20,0:12:20.72:0,21,302	0/0:53,0:28:36.28:0,36,413	0/0:3,0:3:6.02:0,6,181	0/0:5,0:5:15.04:0,15,386	0/0:4,0:4:12.04:0,12,362	0/0:43,0:43:99:0,111,3099	0/0:4,0:4:12.04:0,12,317	0/0:2,0:2:6.02:0,6,181	0/0:10,0:10:27.09:0,27,798	0/0:2,0:2:6.02:0,6,181	0/0:5,0:5:12.04:0,12,340	0/0:3,0:3:9.03:0,9,269	1/1:0,5:5:12.04:217,12,0	0/0:1,0:1:3.01:0,3,90	1/1:2,24:26:60.21:1208,60,0	0/0:27,0:27:75.26:0,75,2113	0/0:5,0:5:15.05:0,15,367	0/0:2,0:2:6.02:0,6,181	./.	./.	./.	0/0:1,0:1:3.01:0,3,90	0/0:6,0:6:15.05:0,15,399	0/0:3,0:3:9.03:0,9,220	0/0:11,0:11:27.09:0,27,768	0/0:17,0:17:51.17:0,51,1397
chr10	89312110	.	ATG	A	1033.65	PASS	AB=0.893;AC=12;AF=0.214;AN=56;BaseQRankSum=7.808;DP=410;FS=2.365;HRun=0;HaplotypeScore=65.0943;InbreedingCoeff=0.6184;MQ=62.18;MQ0=7;MQRankSum=-0.071;QD=9.07;ReadPosRankSum=1.742;VQSLOD=3.0189;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,3:14:44.38:44,0,433	1/1:2,6:8:19.87:240,20,0	0/0:34,0:14:30.05:0,30,469	0/0:31,0:8:16.57:0,17,250	0/1:16,1:17:1.14:1,0,364	0/0:14,0:14:42.14:0,42,826	0/0:4,0:4:12.04:0,12,221	0/0:46,0:46:99:0,135,2555	0/0:14,0:14:24.57:0,25,331	0/0:17,0:17:51.17:0,51,1012	0/0:10,0:10:29.77:0,30,548	0/0:7,0:7:20.79:0,21,210	0/0:5,0:5:15.03:0,15,254	0/0:6,0:6:18.05:0,18,239	1/1:4,6:10:13.20:140,13,0	0/0:8,0:8:23.82:0,24,439	1/1:3,17:19:43.21:594,43,0	0/1:22,2:24:1.42:1,0,566	0/0:8,0:8:24.08:0,24,469	0/0:10,0:10:30.10:0,30,587	1/1:1,7:8:12.04:155,12,0	0/0:8,0:8:24.07:0,24,268	0/0:8,0:8:24.08:0,24,474	0/0:8,0:8:21.07:0,21,423	0/1:12,1:13:20.31:20,0,185	0/0:18,0:18:54.19:0,54,1080	0/0:21,0:21:60.21:0,60,1190	0/0:19,0:19:57.20:0,57,1131
chr10	89312112	.	GCA	G	961.16	PASS	AB=0.933;AC=11;AF=0.196;AN=56;BaseQRankSum=8.106;DP=408;FS=1.706;HRun=0;HaplotypeScore=65.8037;InbreedingCoeff=0.6177;MQ=62.04;MQ0=7;MQRankSum=-0.705;QD=12.32;ReadPosRankSum=2.275;VQSLOD=3.5202;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:17.71:0,18,335	1/1:9,0:9:20.37:234,20,0	0/0:33,0:13:9.01:0,9,122	0/0:31,0:8:8.35:0,8,124	0/0:17,0:17:8.19:0,8,550	0/0:14,0:14:36.12:0,36,594	0/0:4,0:4:9.03:0,9,144	0/0:43,2:45:36.31:0,36,1622	0/0:15,0:15:36.11:0,36,560	0/0:17,0:17:45.15:0,45,732	0/1:9,1:10:10.44:10,0,365	0/0:7,0:7:18.06:0,18,297	0/0:3,0:3:9.03:0,9,149	0/0:6,0:6:18.06:0,18,291	1/1:9,0:9:11.77:123,12,0	0/1:7,1:8:13.45:13,0,323	1/1:21,0:20:47.89:592,48,0	0/0:22,0:22:20.24:0,20,800	0/0:7,0:7:18.06:0,18,297	0/0:10,0:10:27.08:0,27,421	1/1:8,0:8:12.04:147,12,0	0/0:8,0:8:24.08:0,24,396	0/0:8,0:8:21.07:0,21,341	0/0:9,0:9:24.08:0,24,392	0/1:13,0:13:4.27:4,0,322	0/0:18,0:18:48.16:0,48,791	0/0:21,0:21:54.18:0,54,886	0/0:19,0:19:54.18:0,54,870
chr10	89312293	.	AT	A	1550.74	PASS	AB=0.900;AC=9;AF=0.161;AN=56;BaseQRankSum=10.016;DP=532;FS=4.585;HRun=9;HaplotypeScore=54.1143;InbreedingCoeff=0.8671;MQ=79.02;MQ0=0;MQRankSum=-0.243;QD=18.46;ReadPosRankSum=2.988;VQSLOD=4.0053;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.25:0,84,969	1/1:0,2:2:6:55,6,0	0/0:16,0:16:44.94:0,45,459	0/0:9,0:9:17.94:0,18,185	0/1:8,1:9:3.41:3,0,208	0/0:26,0:26:75.21:0,75,855	0/0:26,0:26:72:0,72,809	0/0:28,0:27:72.20:0,72,819	0/0:25,0:25:75.21:0,75,855	0/0:14,0:14:42.12:0,42,476	0/0:12,0:12:33.10:0,33,381	0/0:24,0:24:63.19:0,63,727	0/0:22,0:22:66.18:0,66,748	0/0:21,0:21:63.19:0,63,726	1/1:2,21:23:51.02:467,51,0	0/0:18,0:18:51.15:0,51,589	1/1:3,17:20:48.02:439,48,0	0/0:36,2:38:53.39:0,53,1122	0/0:13,0:13:33.10:0,33,380	0/0:11,0:11:33.10:0,33,381	1/1:3,27:30:81.04:741,81,0	0/0:11,0:11:33.10:0,33,381	0/0:17,0:17:51.15:0,51,589	0/0:20,0:20:60.18:0,60,692	0/0:4,0:4:12.04:0,12,138	0/0:28,0:28:75.22:0,75,866	0/0:21,0:21:54.61:0,55,612	0/0:14,0:14:42.12:0,42,485
chr10	89312830	.	AGAGGTCCT	A	2940.69	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=8.630;DP=331;FS=82.822;HRun=0;HaplotypeScore=74.2293;InbreedingCoeff=0.8745;MQ=49.59;MQ0=24;MQRankSum=-7.526;QD=45.24;ReadPosRankSum=-1.714;VQSLOD=0.2285;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:81.26:0,81,3359	1/1:2,0:2:5.93:40,6,0	0/0:28,0:8:21.07:0,21,827	0/0:32,0:9:12.01:0,12,368	0/0:2,0:2:3.01:0,3,133	0/0:14,0:14:36.12:0,36,1447	0/0:25,0:25:72.19:0,72,2936	1/1:3,16:19:45.01:801,45,0	0/0:10,0:10:30.06:0,30,1213	0/0:5,0:5:15.05:0,15,664	0/0:10,0:10:27.09:0,27,1060	0/0:5,0:5:15.05:0,15,664	0/0:14,0:14:39.13:0,39,1628	0/0:8,0:8:24.08:0,24,994	1/1:0,6:6:18.06:508,18,0	0/0:8,0:8:18.06:0,18,797	1/1:1,9:10:18.06:508,18,0	0/0:20,0:20:60.21:0,60,2657	1/1:1,3:4:12.04:333,12,0	1/1:0,4:4:9.03:253,9,0	1/1:3,10:10:12:181,12,0	./.	0/0:1,0:1:3.01:0,3,133	0/0:29,0:28:72.68:0,73,3016	0/0:4,0:3:9.03:0,9,388	0/0:8,0:7:18.06:0,18,768	1/1:0,7:7:18.06:508,18,0	0/0:8,0:6:18.06:0,18,792
chr10	89313683	.	T	TG	212.12	PASS	AC=10;AF=0.833;AN=12;BaseQRankSum=0.348;DP=11;FS=10.000;HRun=0;HaplotypeScore=36.0159;MQ=81.11;MQ0=0;MQRankSum=-1.741;QD=23.57;ReadPosRankSum=0.696;VQSLOD=4.1289;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:1,0:1:3.01:0,3,41	./.	1/1:0,1:1:3.01:47,3,0	./.	./.	./.	1/1:0,2:2:6:55,6,0	./.	./.	1/1:0,2:2:5.69:57,6,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,3:3:9.02:111,9,0	./.	1/1:0,1:1:2.97:20,3,0
chr10	89313687	.	T	TCAG	240.05	PASS	AC=8;AF=0.80;AN=10;BaseQRankSum=0.742;DP=7;FS=8.451;HRun=0;HaplotypeScore=38.9005;MQ=99.69;MQ0=0;MQRankSum=-0.742;QD=40.01;ReadPosRankSum=0.742;VQSLOD=3.7223;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:1,0:1:3.01:0,3,34	./.	./.	./.	./.	./.	1/1:0,2:2:6.02:120,6,0	./.	./.	1/1:0,1:1:3.01:33,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,2:2:6.02:110,6,0	./.	1/1:0,1:1:3.01:51,3,0
chr10	89314044	.	TTTCGC	T	7176.11	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.034;DP=531;FS=3.559;HRun=0;HaplotypeScore=97.7755;InbreedingCoeff=0.9940;MQ=87.87;MQ0=0;MQRankSum=-6.105;QD=52.77;ReadPosRankSum=-1.290;VQSLOD=4.9610;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.28:0,90,2779	1/1:0,5:5:12.04:261,12,0	0/0:22,0:22:66.23:0,66,1945	0/0:18,0:18:51.04:0,51,1398	0/0:15,0:15:42.14:0,42,1267	0/0:21,0:21:60.21:0,60,1824	0/0:21,0:21:63.20:0,63,1857	1/1:1,29:30:87.25:1698,87,0	0/0:19,0:19:57.20:0,57,1803	0/0:23,0:23:66.23:0,66,2067	0/0:9,0:9:24.08:0,24,761	0/0:32,0:32:96.33:0,96,2926	0/0:26,0:26:72.25:0,72,2231	0/0:23,0:23:69.24:0,69,2114	1/1:0,13:13:36.12:780,36,0	0/0:20,0:20:57.18:0,57,1710	1/1:0,17:17:36.12:752,36,0	0/0:12,0:12:36.10:0,36,1033	1/1:4,18:22:54.12:1040,54,0	1/1:0,9:9:24.08:510,24,0	1/1:2,21:23:48.16:1029,48,0	0/0:15,0:15:45.15:0,45,1397	0/0:19,0:19:51.18:0,51,1580	0/0:26,0:26:78.27:0,78,2303	0/0:11,0:11:33.11:0,33,1043	0/0:19,0:19:54.19:0,54,1685	1/1:0,17:17:51.18:1106,51,0	0/0:14,0:14:36.11:0,36,1024
chr10	89314663	.	ACTCC	A	7500.38	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.632;DP=752;FS=4.740;HRun=0;HaplotypeScore=133.7804;InbreedingCoeff=0.9998;MQ=89.09;MQ0=0;MQRankSum=-3.214;QD=44.65;ReadPosRankSum=4.774;VQSLOD=5.4635;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,138,3605	0/0:10,0:10:30.10:0,30,800	0/0:34,0:34:96.17:0,96,2329	0/0:22,0:22:54.19:0,54,1354	1/1:2,24:26:57.19:1063,57,0	0/0:16,0:16:48.16:0,48,1280	0/0:30,0:30:78.27:0,78,2076	0/0:26,0:26:75.26:0,75,1992	1/1:1,22:23:60.21:1119,60,0	0/0:30,0:30:84.29:0,84,2179	0/0:16,0:16:48.15:0,48,1210	1/1:1,32:33:87.30:1622,87,0	0/0:23,0:23:66.20:0,66,1695	1/1:1,27:28:75.26:1380,75,0	0/0:34,0:34:99:0,99,2544	0/0:37,0:37:99:0,108,2769	0/0:29,0:29:84.29:0,84,2234	1/1:0,14:14:33.09:582,33,0	0/0:25,0:25:66.23:0,66,1698	0/0:20,0:20:60.20:0,60,1520	0/0:56,0:56:99:0,163,4294	1/1:2,24:26:54.18:1007,54,0	0/0:21,0:21:63.22:0,63,1659	0/0:34,0:34:93.32:0,93,2474	1/1:1,17:18:39.13:728,39,0	0/0:22,0:22:60.21:0,60,1563	0/0:26,0:26:78.27:0,78,2070	0/0:23,0:23:69.24:0,69,1831
chr10	89315649	.	TA	T	2835.96	PASS	AB=0.930;AC=34;AF=0.607;AN=56;BaseQRankSum=11.086;DP=505;FS=0.000;HRun=14;HaplotypeScore=69.6371;InbreedingCoeff=0.8572;MQ=75.68;MQ0=0;MQRankSum=-0.830;QD=8.52;ReadPosRankSum=3.187;VQSLOD=2.9320;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,28:41:20.69:423,21,0	1/1:0,9:9:23.51:155,24,0	0/0:17,0:14:8.07:0,8,103	0/1:11,0:9:1.23:1,0,32	1/1:2,9:12:8.17:126,8,0	0/0:22,0:22:42.04:0,42,387	0/0:20,0:20:36.03:0,36,330	1/1:11,0:34:46.17:133,46,0	1/1:4,6:10:11.88:82,12,0	0/0:17,1:18:12.54:0,13,249	0/0:14,0:15:36.01:0,36,322	1/1:2,12:14:20.81:144,21,0	0/0:13,0:13:12.30:0,12,201	1/1:4,20:24:25.69:322,26,0	1/1:2,14:16:32.50:226,33,0	0/0:17,2:19:11.93:0,12,233	1/1:3,16:19:41.63:288,42,0	1/1:2,15:18:41.27:277,41,0	1/1:3,0:12:18.32:53,18,0	1/1:5,0:18:22.38:65,22,0	1/1:7,11:18:27.63:252,28,0	1/1:1,13:14:35.51:238,36,0	0/0:9,0:10:11.12:0,11,124	0/0:18,0:18:21.34:0,21,327	1/1:7,15:23:6.01:166,6,0	0/0:18,1:19:27.44:0,27,385	1/1:5,0:23:34.60:100,35,0	0/1:12,1:15:0.68:1,0,250
chr10	89315892	.	G	GA	11339.88	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=2.228;DP=476;FS=2.831;HRun=1;HaplotypeScore=56.9525;InbreedingCoeff=0.9837;MQ=80.64;MQ0=0;MQRankSum=-4.739;QD=42.16;ReadPosRankSum=1.730;VQSLOD=5.2974;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,1839	1/1:0,3:3:6.02:96,6,0	0/0:15,0:15:45.14:0,45,587	0/0:20,0:20:60.18:0,60,794	1/1:1,10:11:27.09:432,27,0	0/0:12,0:12:33.11:0,33,461	0/0:14,0:14:39.13:0,39,532	1/1:1,25:25:75.26:1187,75,0	1/1:0,15:15:39.13:623,39,0	0/0:11,0:11:33.11:0,33,454	0/0:11,0:11:33.11:0,33,462	1/1:0,24:24:48.16:767,48,0	0/0:7,0:7:21.07:0,21,294	1/1:0,22:22:66.22:1036,66,0	1/1:0,22:22:54.18:863,54,0	0/0:15,0:15:45.15:0,45,629	1/1:0,20:20:48.16:767,48,0	1/1:0,20:20:60.20:959,60,0	1/1:0,18:18:54.17:821,54,0	1/1:0,22:22:63.21:1007,63,0	1/1:1,22:23:54.18:862,54,0	1/1:0,14:14:39.13:623,39,0	0/0:7,0:7:21.07:0,21,293	0/0:25,0:25:72.24:0,72,994	1/1:0,12:12:33.11:527,33,0	0/0:17,0:17:51.16:0,51,689	1/1:0,17:17:48.16:767,48,0	0/0:7,0:7:21.07:0,21,294
chr10	89316067	.	ATAAATAAATAAATAAAT	A	2701.08	PASS	AB=0.916;AC=21;AF=0.420;AN=50;BaseQRankSum=-1.505;DP=302;FS=27.140;HRun=0;HaplotypeScore=107.7843;InbreedingCoeff=0.3422;MQ=42.40;MQ0=21;MQRankSum=-9.634;QD=15.98;ReadPosRankSum=-2.158;VQSLOD=0.2359;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:13:30.04:0,30,967	1/1:4,0:5:11.10:65,11,0	./.	./.	1/1:0,19:19:18.06:512,18,0	0/0:14,0:14:32.99:0,33,2030	0/1:6,0:5:21.08:44,0,21	0/1:36,0:35:99:219,0,1448	1/1:0,9:9:3.01:153,3,0	0/0:9,0:6:17.99:0,18,360	0/0:9,0:8:14.96:0,15,699	1/1:1,13:13:15.05:738,15,0	0/0:2,0:2:5.95:0,6,217	1/1:1,9:9:9.03:419,9,0	0/1:4,0:4:10.89:11,0,321	0/0:5,0:3:9:0,9,522	0/0:33,0:31:15.12:0,15,3162	0/1:5,14:16:99:215,0,114	0/1:14,0:10:59.19:59,0,539	0/1:4,0:4:2.62:48,0,3	./.	1/1:4,0:4:8.90:60,9,0	0/0:8,0:6:17.73:0,18,346	0/0:8,0:4:9.42:0,9,312	1/1:2,11:12:6.02:306,6,0	0/0:4,0:4:12.01:0,12,746	0/1:10,0:8:27.78:28,0,444	0/0:15,0:15:33.11:0,33,2330
chr10	89316085	.	AAAAT	A	1101.20	PASS	AB=0.545;AC=17;AF=0.354;AN=48;BaseQRankSum=2.743;DP=260;FS=0.000;HRun=0;HaplotypeScore=57.6968;InbreedingCoeff=0.5834;MQ=50.71;MQ0=10;MQRankSum=-0.376;QD=10.20;ReadPosRankSum=0.176;VQSLOD=2.3033;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:23.36:0,23,359	./.	./.	0/0:8,0:5:4.57:0,5,48	0/0:19,0:19:9.35:0,9,57	0/0:17,0:17:45.07:0,45,825	0/0:4,0:4:2.27:0,2,38	1/1:14,17:30:50.37:679,50,0	1/1:9,0:9:2.94:18,3,0	0/0:7,0:5:12.04:0,12,243	0/0:8,0:8:12.04:0,12,251	1/1:13,0:12:7.43:70,7,0	0/0:3,0:3:6.01:0,6,75	1/1:8,0:8:4.67:23,5,0	0/0:4,0:4:9.02:0,9,148	0/0:4,0:2:6.02:0,6,147	0/0:31,0:30:78.04:0,78,1364	1/1:16,0:16:2.92:17,3,0	1/1:4,5:7:15.05:248,15,0	1/1:1,3:4:3:29,3,0	./.	./.	0/0:3,0:2:3.01:0,3,74	0/0:4,0:3:5.81:0,6,87	1/1:12,0:12:5.91:38,6,0	0/0:4,0:4:12.04:0,12,257	0/1:1,5:6:24.85:138,0,25	0/0:15,0:15:39.13:0,39,809
chr10	89316960	.	C	CAA	4544.95	PASS	AB=0.569;AC=31;AF=0.554;AN=56;BaseQRankSum=3.279;DP=603;FS=0.788;HRun=10;HaplotypeScore=96.8755;InbreedingCoeff=0.8649;MQ=83.89;MQ0=4;MQRankSum=-1.623;QD=14.20;ReadPosRankSum=-1.356;VQSLOD=3.0688;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,26:40:59.62:801,60,0	1/1:1,0:5:9.86:35,10,0	0/0:49,0:38:3.74:0,4,367	0/0:40,0:27:2.08:0,2,153	1/1:3,11:16:33.03:426,33,0	0/0:21,0:21:51.06:0,51,518	0/0:17,0:19:41.78:0,42,401	1/1:10,17:29:50.57:607,51,0	1/1:2,9:13:21.06:280,21,0	0/0:16,0:17:41.81:0,42,409	0/0:16,0:17:32.50:0,33,387	1/1:9,16:27:20.40:180,20,0	0/0:8,0:8:21.03:0,21,206	1/1:2,6:9:5.98:65,6,0	1/1:2,0:21:40.41:154,40,0	0/0:17,0:17:51.07:0,51,502	1/1:5,0:37:7.37:158,7,0	1/1:5,15:21:20.56:277,21,0	1/1:9,4:14:32.40:347,32,0	1/1:2,9:11:23.90:236,24,0	0/1:7,0:29:2.79:140,0,3	1/1:2,7:12:17.46:183,17,0	0/0:18,0:19:28.83:0,29,355	0/0:24,0:24:60.08:0,60,600	1/1:1,9:13:17.50:208,18,0	0/0:32,0:31:66.02:0,66,670	1/1:4,16:22:30.10:447,30,0	0/0:15,0:15:36.07:0,36,366
chr10	89317830	.	C	CG	1136.44	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-1.215;DP=451;FS=14.387;HRun=7;HaplotypeScore=65.5494;InbreedingCoeff=0.9590;MQ=83.68;MQ0=1;MQRankSum=-1.030;QD=24.18;ReadPosRankSum=1.353;VQSLOD=2.8878;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:72.09:0,72,690	1/1:0,4:4:12.04:144,12,0	0/0:19,0:19:15.50:0,16,288	0/0:12,0:12:14.73:0,15,112	0/0:13,0:13:36.05:0,36,344	0/0:15,0:15:33.04:0,33,319	0/0:23,0:23:54.06:0,54,514	0/0:21,0:21:36.03:0,36,347	0/0:13,0:13:33:0,33,318	0/0:16,0:16:39.06:0,39,376	0/0:7,0:7:18.03:0,18,173	0/0:14,0:14:42.07:0,42,405	0/0:11,0:11:30.03:0,30,283	0/0:18,0:18:51.08:0,51,491	1/1:0,10:10:24.07:290,24,0	0/0:12,0:12:36.06:0,36,348	1/1:5,28:33:46.25:841,46,0	0/0:22,0:22:60.10:0,60,579	0/0:22,0:22:42.05:0,42,401	0/0:6,0:6:15.02:0,15,145	0/0:41,0:40:99:0,108,1035	0/0:7,0:7:15.02:0,15,145	0/0:7,0:7:18.03:0,18,174	0/0:13,0:13:30.04:0,30,289	0/0:16,0:16:42.06:0,42,405	0/0:18,0:18:45.06:0,45,430	0/0:18,0:19:56.12:0,56,527	0/0:8,0:8:24.04:0,24,231
chr10	89318185	.	G	GCTACA	16790.61	PASS	AB=0.638;AC=29;AF=0.518;AN=56;BaseQRankSum=14.961;DP=502;FS=0.705;HRun=0;HaplotypeScore=140.7331;InbreedingCoeff=0.7464;MQ=69.21;MQ0=0;MQRankSum=-16.776;QD=58.71;ReadPosRankSum=0.583;VQSLOD=5.0412;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:30:59.37:2085,59,0	0/1:5,3:8:19.94:303,0,20	0/0:8,0:8:21.05:0,21,439	0/0:22,0:22:57.19:0,57,1253	1/1:3,6:9:21.07:530,21,0	0/0:17,0:17:51.18:0,51,1189	0/0:34,0:34:96.33:0,96,2216	1/1:14,16:30:46.90:1768,47,0	1/1:1,15:16:48.16:1250,48,0	0/0:21,0:21:60.21:0,60,1367	0/0:6,0:6:18.06:0,18,420	1/1:5,24:29:56.56:1885,57,0	0/0:22,0:22:66.21:0,66,1491	0/1:6,10:16:20.36:891,0,20	1/1:5,16:21:28.88:1226,29,0	0/0:17,0:17:51.18:0,51,1189	1/1:8,9:17:42.13:1012,42,0	1/1:7,8:15:11.81:752,12,0	1/1:6,9:15:11.36:848,11,0	1/1:4,5:9:2.24:484,2,0	1/1:11,12:23:34.73:858,35,0	0/1:3,9:12:31.88:658,0,32	0/0:11,0:11:30.08:0,30,628	0/0:30,0:30:90.31:0,90,2053	1/1:2,5:7:15.05:392,15,0	0/0:18,0:18:45.15:0,45,995	1/1:10,19:29:45.13:1848,45,0	0/0:10,0:10:30.10:0,30,699
chr10	89318187	.	G	GC	5532.79	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=16.331;DP=503;FS=0.000;HRun=0;HaplotypeScore=132.2386;InbreedingCoeff=0.9674;MQ=69.30;MQ0=0;MQRankSum=-16.163;QD=19.21;ReadPosRankSum=-0.695;VQSLOD=6.1632;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:30:80.92:696,81,0	1/1:6,3:9:14.28:115,14,0	0/0:9,0:9:27.09:0,27,364	0/0:23,0:23:42.19:0,42,766	1/1:3,6:9:17.96:147,18,0	0/0:17,0:17:51.17:0,51,713	0/0:34,0:34:99:0,102,1373	1/1:14,16:30:37.77:526,38,0	1/1:1,15:16:48:421,48,0	0/0:20,0:20:60.20:0,60,838	0/0:6,0:6:18.06:0,18,252	1/1:6,24:30:82.75:723,83,0	0/0:21,0:21:63.21:0,63,874	1/1:7,10:17:45.31:358,45,0	1/1:5,16:21:59.77:494,60,0	0/0:17,0:17:51.17:0,51,713	1/1:6,9:15:31.53:237,32,0	1/1:8,8:16:31.96:264,32,0	1/1:6,9:15:15.90:242,16,0	1/1:3,5:8:3.65:132,4,0	1/1:11,12:23:33.01:256,33,0	1/1:3,9:12:17.36:197,17,0	0/0:10,0:10:27.07:0,27,359	0/0:29,0:29:84.28:0,84,1174	1/1:2,5:7:15:131,15,0	0/0:18,0:18:48.15:0,48,656	1/1:11,19:30:68.70:595,69,0	0/0:11,0:11:30.10:0,30,410
chr10	89318575	.	CG	C	6149.48	PASS	AB=0.833;AC=31;AF=0.554;AN=56;BaseQRankSum=8.253;DP=547;FS=3.133;HRun=7;HaplotypeScore=67.3655;InbreedingCoeff=0.8916;MQ=70.11;MQ0=1;MQRankSum=-3.545;QD=19.16;ReadPosRankSum=4.231;VQSLOD=4.6550;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,32:40:54.29:755,54,0	1/1:1,3:4:9.02:92,9,0	0/0:18,0:18:43.51:0,44,549	0/0:15,0:14:39.11:0,39,465	1/1:3,7:10:7.16:147,7,0	0/0:25,0:25:69.19:0,69,837	0/0:20,0:20:57.16:0,57,691	1/1:8,13:21:38.12:379,38,0	1/1:4,4:8:14.95:136,15,0	0/0:17,0:17:42.13:0,42,516	0/0:9,0:9:21.03:0,21,227	1/1:2,6:8:9.01:89,9,0	0/0:18,0:18:45.11:0,45,539	1/1:3,9:12:21.93:216,22,0	1/1:2,31:33:80.19:845,80,0	0/0:26,2:28:39.38:0,39,784	1/1:7,35:42:69.85:917,70,0	1/1:0,22:22:51.12:520,51,0	1/1:5,24:29:60.96:645,61,0	1/1:4,13:17:21.90:213,22,0	1/1:12,26:38:60.12:606,60,0	0/1:4,1:5:21.38:22,0,21	0/0:17,0:17:48.07:0,48,550	0/0:31,0:31:84.21:0,84,1024	1/1:5,10:15:12.83:241,13,0	0/0:22,0:22:27.05:0,27,293	1/1:8,9:17:35.88:326,36,0	0/0:6,0:6:15.01:0,15,171
chr10	89318582	.	GA	G	1359.54	PASS	AB=0.946;AC=25;AF=0.446;AN=56;BaseQRankSum=14.000;DP=525;FS=9.790;HRun=7;HaplotypeScore=78.5348;InbreedingCoeff=0.5083;MQ=76.22;MQ0=1;MQRankSum=-6.990;QD=4.53;ReadPosRankSum=7.599;VQSLOD=-0.7404;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:40:13.63:160,0,14	1/1:3,0:3:7.16:31,7,0	0/0:23,0:23:50.17:0,50,580	0/0:18,0:17:47.81:0,48,526	1/1:9,1:10:12.45:66,12,0	0/0:25,0:25:69.19:0,69,822	0/0:25,0:25:69.14:0,69,773	0/1:15,2:17:24.80:77,0,25	1/1:6,0:6:9.33:48,9,0	0/0:15,0:15:39.11:0,39,471	0/0:8,0:8:15.01:0,15,156	1/1:6,0:6:8.45:46,8,0	0/0:18,0:18:48.08:0,48,547	1/1:10,0:10:18.86:83,19,0	1/1:34,1:35:13.61:239,14,0	0/0:26,0:26:52.52:0,53,797	1/1:42,0:42:16.47:215,16,0	0/1:24,0:24:3.12:78,0,3	0/1:26,0:26:2.57:103,0,3	0/1:16,1:17:47.73:62,0,48	1/1:28,2:30:19.21:138,19,0	1/1:3,0:3:2.95:19,3,0	0/0:16,0:16:44.75:0,45,498	0/0:32,0:32:93.19:0,93,1075	0/1:14,1:15:2.62:58,0,3	0/0:14,0:14:27.05:0,27,294	0/1:13,3:16:15.39:134,0,15	0/0:5,0:5:15.05:0,15,184
chr10	89318723	.	TA	T	347.44	PASS	AB=0.889;AC=12;AF=0.214;AN=56;BaseQRankSum=1.783;DP=547;FS=18.166;HRun=13;HaplotypeScore=157.2959;InbreedingCoeff=-0.1313;MQ=66.71;MQ0=7;MQRankSum=-3.066;QD=1.66;ReadPosRankSum=2.620;VQSLOD=-0.2431;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:23:14.53:24,0,15	0/1:7,0:8:9.02:9,0,22	0/0:41,0:16:12.32:0,12,65	0/1:31,0:16:33.57:38,0,34	0/0:13,0:12:3.04:0,3,58	0/0:29,0:29:69.06:0,69,653	0/0:13,1:14:9.89:0,10,237	0/1:20,8:26:23.22:165,0,23	0/0:9,0:8:13.42:0,13,58	0/0:27,0:27:57.04:0,57,538	0/0:14,0:14:17.99:0,18,294	0/1:12,0:11:2.11:2,0,37	0/1:18,0:18:3.69:4,0,257	0/0:19,0:17:11.05:0,11,91	0/0:27,0:29:29.90:0,30,146	0/0:23,0:23:34.15:0,34,444	0/1:15,2:20:22.03:42,0,22	0/0:18,0:18:7.30:0,7,73	0/1:24,7:30:76.66:85,0,77	0/1:14,3:17:64.13:78,0,64	1/1:5,2:6:1.13:26,1,0	0/0:7,0:7:17.10:0,17,77	0/0:13,1:14:8.12:0,8,232	0/0:21,0:21:35.43:0,35,385	0/0:18,0:20:27.39:0,27,129	0/0:22,0:23:41.52:0,42,410	0/1:13,1:14:13.57:14,0,69	0/0:16,0:16:45.05:0,45,428
chr10	89318725	.	A	AC	838.10	PASS	AB=0.903;AC=6;AF=0.107;AN=56;BaseQRankSum=2.622;DP=566;FS=40.288;HRun=0;HaplotypeScore=169.6180;InbreedingCoeff=0.2598;MQ=64.39;MQ0=8;MQRankSum=-2.473;QD=6.60;ReadPosRankSum=0.839;VQSLOD=1.8928;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:55.33:0,55,397	0/0:9,0:9:11.87:0,12,79	0/0:41,0:16:26.47:0,26,332	0/1:28,0:14:3.68:4,0,114	0/0:18,0:17:18.85:0,19,157	0/0:30,0:30:87.17:0,87,1071	0/0:13,0:13:39.07:0,39,461	0/1:30,1:29:23.60:267,0,24	0/0:9,0:8:12.23:0,12,59	0/0:27,0:27:80.63:0,81,919	0/0:14,0:14:41.90:0,42,446	0/0:12,0:11:20.16:0,20,118	0/0:18,0:18:46.58:0,47,494	0/0:19,0:17:39.71:0,40,284	0/0:29,0:28:64.69:0,65,353	0/0:24,0:24:62.06:0,62,691	0/0:21,0:20:46.10:0,46,292	0/0:18,0:18:37.33:0,37,281	0/1:27,4:30:22.79:284,0,23	1/1:12,5:17:24.89:243,25,0	0/0:7,0:6:9.56:0,10,57	0/0:9,0:9:17.28:0,17,98	0/0:15,0:15:39.02:0,39,447	0/0:21,0:21:57.07:0,57,670	0/0:21,0:21:37.48:0,37,177	0/0:24,0:24:57.75:0,58,709	0/1:14,5:19:22.84:165,0,23	0/0:16,0:16:45.13:0,45,591
chr10	89318731	.	A	AAAC	1609.04	PASS	AB=0.986;AC=18;AF=0.321;AN=56;BaseQRankSum=10.555;DP=570;FS=26.773;HRun=0;HaplotypeScore=142.4502;InbreedingCoeff=0.3592;MQ=57.43;MQ0=9;MQRankSum=-8.655;QD=7.09;ReadPosRankSum=4.522;VQSLOD=1.1012;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:99:133,0,121	0/1:9,0:9:19.17:19,0,21	0/0:36,0:9:11.30:0,11,217	0/0:31,0:12:10.64:0,11,117	0/1:18,1:18:59.44:59,0,76	0/0:26,0:26:78.19:0,78,1086	0/0:15,0:15:36.09:0,36,478	0/0:27,0:25:38.06:0,38,216	1/1:9,1:9:13.34:145,13,0	0/0:26,0:26:70.06:0,70,932	0/0:14,0:14:42.06:0,42,503	1/1:12,0:11:25.20:181,25,0	0/0:19,0:19:52.61:0,53,586	0/1:15,1:13:3.62:190,0,4	0/1:29,0:28:3.38:3,0,138	0/0:27,0:27:67.53:0,68,848	0/1:21,0:20:5.52:6,0,92	1/1:17,0:17:15.89:196,16,0	0/0:31,0:30:16.22:0,16,234	0/1:17,0:17:10.33:10,0,81	0/0:8,0:7:9.15:0,9,45	1/1:7,3:10:3.51:220,4,0	0/0:16,0:16:45.05:0,45,547	0/0:24,0:24:44.11:0,44,711	1/1:6,15:21:18.80:605,19,0	0/0:26,0:26:69.01:0,69,833	0/1:21,0:21:20.73:21,0,39	0/0:16,0:16:45.13:0,45,649
chr10	89318732	.	A	AAAC	2008.20	PASS	AB=0.981;AC=20;AF=0.357;AN=56;BaseQRankSum=9.825;DP=579;FS=43.848;HRun=0;HaplotypeScore=142.6732;InbreedingCoeff=0.2411;MQ=56.15;MQ0=9;MQRankSum=-9.630;QD=6.92;ReadPosRankSum=2.785;VQSLOD=1.5866;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:10.40:0,10,224	1/1:9,0:10:16.02:99,16,0	0/0:36,0:9:0.94:0,1,175	0/1:30,0:11:2.70:3,0,82	0/0:19,0:18:13.93:0,14,128	0/0:26,0:26:78.18:0,78,1067	0/0:15,0:15:42.03:0,42,506	1/1:29,1:28:43.20:378,43,0	0/1:11,0:10:15.60:26,0,16	0/0:27,0:27:77.51:0,78,968	0/0:14,0:14:41.41:0,41,463	0/1:13,0:12:9.01:9,0,36	0/0:19,0:19:52:0,52,568	0/1:17,0:14:28.07:28,0,44	0/1:29,0:28:81.35:188,0,81	0/0:27,0:27:76.71:0,77,871	0/1:21,0:20:4.03:165,0,4	0/1:17,0:17:23.59:24,0,103	0/1:26,4:31:22.08:360,0,22	1/1:12,5:17:39.41:352,39,0	0/1:8,0:7:5.75:6,0,26	0/1:10,0:10:18.51:57,0,19	0/0:16,0:16:41.97:0,42,502	0/0:23,0:23:59.95:0,60,722	1/1:21,0:21:9.77:209,10,0	0/0:26,0:26:72.06:0,72,846	1/1:17,5:22:10.35:287,10,0	0/0:16,0:16:45.13:0,45,630
chr10	89318737	.	CA	C	105.74	PASS	AB=0.930;AC=7;AF=0.125;AN=56;BaseQRankSum=4.291;DP=579;FS=6.278;HRun=13;HaplotypeScore=126.1520;InbreedingCoeff=0.0999;MQ=55.85;MQ0=9;MQRankSum=-6.401;QD=0.82;ReadPosRankSum=-1.753;VQSLOD=0.1802;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:13.65:0,14,139	0/1:8,1:9:12.38:12,0,44	0/0:39,0:10:3.33:0,3,98	0/1:32,0:12:8.34:8,0,12	0/0:19,0:18:12.64:0,13,63	0/0:26,0:26:68.57:0,69,741	0/0:14,0:14:35.13:0,35,377	0/1:30,0:27:19.10:19,0,133	0/0:11,0:10:10.29:0,10,51	0/0:27,0:27:79.10:0,79,889	0/0:13,0:14:41.20:0,41,432	0/0:16,0:15:11.20:0,11,70	0/0:20,0:20:36.39:0,36,504	0/0:17,0:14:20.75:0,21,103	0/1:25,3:27:48.17:48,0,181	0/0:27,0:27:71.76:0,72,723	0/1:18,4:21:60.09:92,0,60	0/0:16,0:16:11.81:0,12,80	0/0:31,0:30:18.90:0,19,292	0/0:14,0:14:11.50:0,12,193	1/1:6,2:7:5.19:50,5,0	0/0:10,0:11:11.67:0,12,69	0/0:14,0:14:38.44:0,38,383	0/0:22,0:22:49.93:0,50,491	0/0:19,0:19:32:0,32,138	0/0:27,0:27:64.82:0,65,691	0/0:22,0:22:15.98:0,16,193	0/0:19,0:19:45.11:0,45,496
chr10	89318740	.	A	AAAC	1695.32	PASS	AB=0.811;AC=11;AF=0.196;AN=56;BaseQRankSum=8.719;DP=587;FS=14.562;HRun=0;HaplotypeScore=143.6542;InbreedingCoeff=0.4716;MQ=61.60;MQ0=9;MQRankSum=-9.291;QD=14.25;ReadPosRankSum=4.638;VQSLOD=2.4052;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:17.17:0,17,264	0/1:10,0:10:9.86:10,0,68	0/0:44,0:16:19.19:0,19,302	0/0:35,0:15:12.54:0,13,87	0/1:16,3:18:78.19:210,0,78	0/0:26,0:26:78.10:0,78,1182	0/0:14,0:14:36.12:0,36,586	0/0:31,0:28:53.70:0,54,535	1/1:8,4:11:8.76:258,9,0	0/0:27,0:27:81.26:0,81,1332	0/0:14,0:14:41.63:0,42,659	0/1:11,5:15:14.84:273,0,15	0/0:19,0:19:51.16:0,51,780	0/1:11,5:13:1.25:270,0,1	0/0:30,0:29:52.47:0,52,346	0/0:27,1:28:17.84:0,18,1084	0/0:20,0:19:33.92:0,34,208	0/1:7,6:14:14.97:345,0,15	0/0:32,0:31:63.70:0,64,566	0/0:13,0:13:34.96:0,35,250	0/0:7,0:8:9.44:0,9,54	1/1:12,0:12:25.63:193,26,0	0/0:14,0:14:39.07:0,39,591	0/0:20,0:21:47.97:0,48,796	1/1:18,2:20:11.67:296,12,0	0/0:26,0:26:68.32:0,68,1089	0/0:23,0:23:32.83:0,33,255	0/0:19,0:19:45.15:0,45,734
chr10	89318746	.	AC	A	2947.07	PASS	AB=0.975;AC=32;AF=0.571;AN=56;BaseQRankSum=14.958;DP=585;FS=11.765;HRun=1;HaplotypeScore=117.7076;InbreedingCoeff=0.7253;MQ=61.02;MQ0=9;MQRankSum=-10.229;QD=7.86;ReadPosRankSum=-0.513;VQSLOD=-0.3323;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:57.04:106,0,57	1/1:10,0:10:5.77:54,6,0	0/1:43,0:15:43.02:43,0,152	0/1:35,1:16:5.06:5,0,37	1/1:12,0:12:20.18:120,20,0	0/0:26,0:26:40.40:0,40,641	0/0:13,0:13:29.88:0,30,294	1/1:29,3:29:72.99:566,73,0	1/1:14,1:14:36.95:247,37,0	0/0:28,0:28:53.07:0,53,751	0/0:15,0:15:20.57:0,21,348	1/1:13,1:13:21.51:123,22,0	0/0:19,0:19:36.81:0,37,421	1/1:17,1:15:30.90:215,31,0	1/1:30,0:29:14.68:243,15,0	0/0:27,0:27:67.46:0,67,704	1/1:18,0:17:10.25:101,10,0	0/1:12,1:13:2.51:150,0,3	1/1:30,2:31:56.33:415,56,0	1/1:11,2:13:27.46:157,27,0	1/1:10,0:9:21.30:139,21,0	1/1:11,1:12:28.45:172,28,0	0/0:14,0:14:34.80:0,35,355	0/0:20,0:20:26.36:0,26,421	1/1:19,0:19:30.64:150,31,0	0/0:30,0:30:41.70:0,42,590	1/1:23,1:24:24.63:156,25,0	0/0:18,0:18:41.40:0,41,407
chr10	89318752	.	A	AC	2362.42	PASS	AB=0.773;AC=20;AF=0.357;AN=56;BaseQRankSum=11.849;DP=585;FS=2.622;HRun=0;HaplotypeScore=120.7973;InbreedingCoeff=0.1067;MQ=58.50;MQ0=9;MQRankSum=-7.182;QD=7.75;ReadPosRankSum=3.987;VQSLOD=3.8681;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,3:26:99:118,0,135	0/1:3,9:12:53.72:78,0,54	0/0:33,0:13:31.15:0,31,362	0/0:33,0:14:5.64:0,6,194	0/1:9,1:12:35.83:96,0,36	0/0:24,0:24:69.14:0,69,880	0/0:12,0:12:24.63:0,25,354	0/1:34,0:31:60.77:229,0,61	1/1:10,0:13:34.23:208,34,0	0/0:28,0:28:84.18:0,84,1053	0/0:14,0:14:39.94:0,40,487	1/1:10,0:14:20.97:124,21,0	0/0:21,0:21:60.14:0,60,731	0/1:13,1:14:3.92:170,0,4	0/1:27,2:29:69.82:404,0,70	0/0:26,0:27:63.68:0,64,941	0/1:8,8:15:58.59:122,0,59	0/1:5,2:15:8.64:183,0,9	0/1:29,3:31:51.92:228,0,52	0/1:13,0:13:32.40:32,0,51	1/1:11,0:10:4.55:100,5,0	0/1:9,1:12:1.66:102,0,2	0/0:16,0:16:45.05:0,45,528	0/0:22,0:22:51.41:0,51,664	1/1:18,0:20:39.44:241,39,0	0/0:31,0:31:74.92:0,75,917	0/1:8,18:26:46.74:107,0,47	0/0:19,0:19:51.07:0,51,614
chr10	89319774	.	A	ACAAT	1538.34	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.148;DP=551;FS=0.000;HRun=0;HaplotypeScore=90.7386;InbreedingCoeff=0.8887;MQ=69.50;MQ0=0;MQRankSum=-2.414;QD=46.62;ReadPosRankSum=0.115;VQSLOD=4.1128;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,160,2902	0/0:4,0:4:12.04:0,12,221	0/0:10,0:10:14.72:0,15,232	0/0:7,0:7:20.02:0,20,230	0/0:15,0:15:39.08:0,39,685	0/0:18,0:18:45.15:0,45,828	0/0:23,0:23:66.20:0,66,1172	0/0:26,0:26:48.16:0,48,827	0/0:24,0:24:57.18:0,57,1008	0/0:14,0:14:39.13:0,39,691	0/0:10,0:10:27.09:0,27,497	0/0:26,0:26:63.22:0,63,1159	0/0:15,0:15:45.15:0,45,827	0/0:28,0:28:75.26:0,75,1374	0/0:33,0:33:81.26:0,81,1447	0/0:23,0:23:45.15:0,45,828	0/0:41,0:41:99:0,105,1916	0/0:18,0:18:45.15:0,45,824	0/0:27,0:27:69.23:0,69,1232	0/0:7,0:7:15.05:0,15,276	1/1:5,28:33:72.59:1633,73,0	0/0:6,0:6:18.05:0,18,300	0/0:5,0:5:12.04:0,12,221	0/0:37,0:37:99:0,102,1797	0/0:7,0:7:18.06:0,18,331	0/0:16,0:16:45.15:0,45,828	0/0:12,0:12:36.12:0,36,653	0/0:7,0:7:18.06:0,18,302
chr10	89320036	.	T	TC	548.32	PASS	AB=0.993;AC=16;AF=0.286;AN=56;BaseQRankSum=3.499;DP=283;FS=5.485;HRun=0;HaplotypeScore=31.6235;InbreedingCoeff=0.6522;MQ=74.64;MQ0=13;MQRankSum=2.165;QD=5.27;ReadPosRankSum=2.440;VQSLOD=2.3790;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:34.25:0,34,336	0/0:1,0:1:3:0,3,27	0/1:65,0:13:27.79:28,0,118	0/0:60,0:13:13.20:0,13,119	1/1:1,4:5:15.02:160,15,0	0/0:3,0:3:6:0,6,64	0/0:11,0:11:33.05:0,33,384	0/0:13,0:13:38.98:0,39,364	1/1:1,5:5:8.98:90,9,0	0/0:5,0:5:12.03:0,12,152	0/0:8,0:8:22.51:0,23,220	1/1:0,6:6:3.01:35,3,0	0/0:5,0:5:12.51:0,13,151	1/1:0,4:4:8.92:87,9,0	0/1:5,0:5:0:0,0,0	0/0:3,0:3:8.95:0,9,82	0/0:13,0:13:15.99:0,16,124	1/1:0,8:8:15.04:177,15,0	0/0:9,0:9:26.92:0,27,227	0/0:7,0:7:14.88:0,15,127	0/0:3,0:3:4.24:0,4,28	1/1:0,2:2:6.02:71,6,0	0/0:4,0:4:8.83:0,9,61	0/0:5,0:5:15.03:0,15,182	1/1:0,2:2:6.02:71,6,0	0/0:7,0:7:14.37:0,14,134	0/0:6,0:6:6.01:0,6,58	0/0:2,0:2:6:0,6,51
chr10	89320041	.	TTA	T	435.32	PASS	AB=0.994;AC=17;AF=0.304;AN=56;BaseQRankSum=3.056;DP=268;FS=0.000;HRun=0;HaplotypeScore=31.5837;InbreedingCoeff=0.5466;MQ=72.08;MQ0=13;MQRankSum=1.561;QD=3.96;ReadPosRankSum=0.668;VQSLOD=1.3142;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:2.49:0,2,300	0/0:1,0:1:2.97:0,3,20	0/0:56,0:10:18.64:0,19,141	0/1:51,1:12:2.81:3,0,61	1/1:6,0:6:11.91:65,12,0	0/0:3,0:3:5.89:0,6,64	0/0:11,0:11:29.11:0,29,289	1/1:2,10:12:23.37:225,23,0	0/0:6,0:5:5.24:0,5,18	0/0:5,0:5:14.38:0,14,141	0/0:8,0:8:23.62:0,24,235	0/0:4,0:4:1.55:0,2,4	0/0:5,0:5:14.87:0,15,152	0/0:4,0:4:0.83:0,1,9	0/1:6,0:6:0:0,0,0	0/0:3,0:3:4.56:0,5,47	0/0:14,0:14:17.90:0,18,163	1/1:8,0:8:11.81:44,12,0	1/1:1,7:8:16.76:130,17,0	0/1:6,0:6:23.28:23,0,32	0/0:5,0:5:11.99:0,12,111	1/1:2,0:2:2.92:7,3,0	0/0:4,0:4:9:0,9,97	0/0:7,0:7:5.12:0,5,180	1/1:3,0:3:6.28:33,6,0	0/0:7,0:7:18.80:0,19,148	1/1:0,7:7:6.02:71,6,0	0/0:2,0:2:5.99:0,6,55
chr10	89320198	.	T	TTC	534.27	PASS	AB=0.904;AC=11;AF=0.196;AN=56;BaseQRankSum=4.495;DP=412;FS=3.803;HRun=0;HaplotypeScore=66.8774;InbreedingCoeff=-0.0144;MQ=57.24;MQ0=15;MQRankSum=-1.690;QD=3.84;ReadPosRankSum=1.704;VQSLOD=1.5173;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:22:12.51:13,0,27	0/1:6,0:6:1.52:2,0,165	0/0:37,0:12:20.30:0,20,231	0/0:26,0:12:20.16:0,20,161	0/0:17,0:17:17.88:0,18,186	0/0:8,0:8:17.97:0,18,153	0/0:18,0:17:43.51:0,44,481	1/1:12,19:30:20.01:410,20,0	0/0:9,0:8:3.17:0,3,62	0/0:10,0:10:11.38:0,11,261	0/0:4,0:4:12.02:0,12,143	0/1:13,0:12:17.09:17,0,73	0/0:17,0:17:45.93:0,46,387	0/0:8,0:7:4.48:0,4,44	0/0:12,0:12:18.03:0,18,194	0/0:12,0:12:28.29:0,28,356	0/0:27,0:27:54.95:0,55,641	0/1:15,0:12:8.43:8,0,50	0/1:23,0:20:48.60:100,0,49	0/1:2,5:7:25.43:38,0,25	0/0:19,0:16:28.33:0,28,229	0/1:7,0:6:5.78:6,0,18	0/0:6,0:6:9:0,9,80	0/0:14,0:14:27.57:0,28,251	0/1:6,0:6:12.55:13,0,14	0/0:21,0:20:56.51:0,57,568	0/1:7,0:7:45.95:72,0,46	0/0:7,0:7:12.03:0,12,158
chr10	89320204	.	T	TTTTTTC	260.63	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=5.111;DP=422;FS=11.228;HRun=0;HaplotypeScore=91.3298;InbreedingCoeff=-0.0554;MQ=59.90;MQ0=19;MQRankSum=-1.467;QD=1.79;ReadPosRankSum=1.826;VQSLOD=0.8594;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:20:28.68:49,0,29	0/0:6,0:6:15.04:0,15,240	0/0:43,0:14:9.64:0,10,106	0/1:31,0:15:0.29:0,0,84	0/0:17,0:17:9.71:0,10,148	0/0:8,0:8:11.98:0,12,102	0/0:18,0:17:40.39:0,40,513	0/0:35,0:30:28.90:0,29,379	0/0:10,0:9:14.96:0,15,92	0/0:9,0:9:26.81:0,27,340	0/0:3,0:3:9.02:0,9,147	0/1:12,0:11:15.51:16,0,16	0/0:18,0:16:35.64:0,36,281	0/0:8,0:7:2.03:0,2,27	0/0:13,0:13:24.02:0,24,255	0/0:14,0:14:30.45:0,30,398	0/0:27,0:27:55.31:0,55,764	0/1:16,0:11:1.23:1,0,60	0/1:23,0:19:11.26:11,0,194	0/1:6,0:6:17.50:18,0,32	1/1:10,5:14:2.60:190,3,0	0/1:7,0:6:9.97:34,0,10	0/0:5,0:5:5.99:0,6,50	0/0:14,0:14:24.08:0,24,259	0/1:6,0:6:6.79:7,0,30	0/0:21,0:20:57.03:0,57,700	0/1:7,0:7:64.79:65,0,75	0/0:7,0:7:17.38:0,17,223
chr10	89320215	.	T	TTTG	1463.26	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=6.989;DP=447;FS=11.157;HRun=0;HaplotypeScore=76.6726;InbreedingCoeff=0.5748;MQ=55.71;MQ0=19;MQRankSum=-1.570;QD=6.71;ReadPosRankSum=-0.581;VQSLOD=1.0657;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:18:47.36:47,0,68	0/0:4,0:4:12.03:0,12,148	0/1:43,0:10:1.41:1,0,71	0/1:39,0:15:9.49:9,0,86	1/1:15,0:17:21.48:291,21,0	0/0:3,0:3:5.79:0,6,37	0/0:18,0:17:42.58:0,43,390	0/0:36,0:27:49.99:0,50,357	1/1:10,2:11:23.18:211,23,0	0/0:10,0:10:20.34:0,20,211	0/0:4,0:3:8.99:0,9,100	1/1:14,1:14:27.62:272,28,0	0/0:17,0:16:41.63:0,42,282	1/1:9,0:8:14.97:156,15,0	0/0:17,0:17:29.77:0,30,270	0/0:15,0:15:7.70:0,8,324	0/0:28,0:28:58.52:0,59,534	1/1:15,2:14:30.01:304,30,0	0/0:26,0:23:16.13:0,16,314	0/1:5,0:5:5.93:6,0,52	0/1:13,0:11:2.23:2,0,58	1/1:7,0:8:20.90:177,21,0	0/0:5,0:5:6.01:0,6,57	0/0:17,0:16:25.19:0,25,232	1/1:5,1:7:18.42:175,18,0	0/0:19,0:18:44.77:0,45,444	0/1:11,0:11:2.17:2,0,175	0/0:7,0:7:17.84:0,18,159
chr10	89320263	.	TC	T	2899.77	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=8.707;DP=448;FS=22.475;HRun=2;HaplotypeScore=46.6414;InbreedingCoeff=0.9521;MQ=52.18;MQ0=24;MQRankSum=4.550;QD=31.18;ReadPosRankSum=2.448;VQSLOD=1.8394;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.18:0,78,1111	0/0:5,0:4:9.03:0,9,135	./.	0/0:24,0:3:5.85:0,6,59	1/1:0,14:14:42.07:524,42,0	0/0:4,0:4:12.04:0,12,180	0/0:18,0:17:48.16:0,48,715	0/0:27,0:24:66.12:0,66,899	1/1:0,18:17:45.15:584,45,0	0/0:13,0:12:36.12:0,36,540	0/0:8,0:6:18.03:0,18,246	1/1:0,15:15:39.13:506,39,0	0/0:13,0:12:33.11:0,33,493	1/1:0,13:12:27.09:351,27,0	0/0:23,0:23:63.21:0,63,943	0/0:22,0:22:63.21:0,63,943	0/0:26,0:26:63.20:0,63,908	1/1:1,19:18:48.16:623,48,0	0/0:22,0:21:60.20:0,60,890	0/0:8,0:8:24.08:0,24,359	0/0:22,0:21:60.20:0,60,895	1/1:0,8:8:24.08:312,24,0	0/0:6,0:6:18.06:0,18,269	0/0:16,0:15:42.10:0,42,603	1/1:0,5:5:15.05:195,15,0	0/0:20,0:20:57.19:0,57,853	0/0:24,0:23:69.20:0,69,997	0/0:6,0:5:12.04:0,12,180
chr10	89320318	.	GCCTCGGCACATCTTCTCTCTACTCCCT	G	703.53	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.296;DP=494;FS=0.000;HRun=0;HaplotypeScore=331.0436;InbreedingCoeff=0.7269;MQ=73.58;MQ0=0;MQRankSum=-0.081;QD=11.73;ReadPosRankSum=-0.423;VQSLOD=0.9011;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:30.82:0,31,1414	0/0:2,0:2:3.01:0,3,43	0/0:18,0:18:16.29:0,16,577	0/0:21,0:20:24.05:0,24,725	0/0:14,0:14:18.02:0,18,1284	0/0:11,0:11:27.08:0,27,2811	0/0:24,0:24:54.19:0,54,4610	1/1:18,2:19:4.24:93,4,0	0/0:23,0:23:42.14:0,42,4639	0/0:12,0:12:18.06:0,18,1860	0/0:7,0:7:12.04:0,12,991	0/0:22,0:22:45.14:0,45,4798	0/0:17,0:17:27.09:0,27,2885	0/0:15,0:15:27.09:0,27,2802	0/0:27,0:27:45.15:0,45,5026	0/0:28,0:28:57.20:0,57,5726	0/0:28,0:28:51.13:0,51,4598	0/0:22,0:22:39.10:0,39,3997	1/1:7,4:11:9:113,9,0	1/1:6,1:7:3.01:209,3,0	0/0:27,0:27:39.13:0,39,3196	0/0:15,0:15:27.09:0,27,2973	0/0:9,0:9:11.99:0,12,825	0/0:25,0:25:57.20:0,57,6482	0/0:5,0:5:9.03:0,9,850	0/0:25,0:25:45.15:0,45,5002	1/1:20,2:22:6.02:417,6,0	0/0:4,0:4:3.01:0,3,371
chr10	89320341	.	T	TCCCTCCTC	1959	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.272;DP=438;FS=4.435;HRun=0;HaplotypeScore=120.4664;InbreedingCoeff=0.4455;MQ=71.28;MQ0=0;MQRankSum=-7.397;QD=57.62;ReadPosRankSum=0.385;VQSLOD=3.5096;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,20:34:54.19:2053,54,0	0/0:2,0:2:3.01:0,3,47	0/0:22,0:22:45.15:0,45,1151	0/0:22,0:21:34.26:0,34,1107	0/0:13,0:13:33.05:0,33,701	0/0:11,0:11:33.10:0,33,839	0/0:31,0:31:84.26:0,84,2115	0/0:10,0:10:2.95:0,3,19	0/0:18,0:18:48.13:0,48,1167	0/0:9,0:9:27.09:0,27,706	0/0:9,0:9:18.06:0,18,457	0/0:18,0:18:48.15:0,48,1188	0/0:14,0:14:39.09:0,39,993	0/0:16,0:16:42.10:0,42,1074	0/0:27,0:27:66.21:0,66,1720	0/0:26,0:26:72.25:0,72,1910	0/0:25,0:25:69.19:0,69,1754	0/0:21,0:21:51.14:0,51,1322	0/0:5,0:5:2.98:0,3,22	0/0:2,0:2:3.01:0,3,43	0/0:26,0:26:63.20:0,63,1624	0/0:15,0:15:36.11:0,36,914	0/0:6,0:6:12.04:0,12,288	0/0:23,0:23:66.23:0,66,1766	0/0:4,0:4:12.04:0,12,325	0/0:19,0:19:48.16:0,48,1302	0/0:8,0:8:0.64:0,1,122	0/0:2,0:2:6.02:0,6,111
chr10	89320768	.	GGATGGGTGT	G	2035.76	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.224;DP=374;FS=17.487;HRun=0;HaplotypeScore=113.9080;InbreedingCoeff=0.8881;MQ=99.25;MQ0=0;MQRankSum=-7.385;QD=67.86;ReadPosRankSum=2.912;VQSLOD=2.7149;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:36.12:0,36,1716	0/0:6,0:6:18.06:0,18,768	0/0:22,0:22:63.99:0,64,2323	0/0:21,0:21:49.88:0,50,1860	0/0:4,0:4:12.04:0,12,500	0/0:4,0:4:12.04:0,12,592	0/0:17,0:17:51.11:0,51,2270	1/1:2,4:6:12.04:364,12,0	0/0:22,0:22:60.19:0,60,2724	0/0:12,0:12:30.10:0,30,1413	0/0:2,0:2:6.02:0,6,200	0/0:25,0:25:72.23:0,72,3199	0/0:12,0:12:36.11:0,36,1510	0/0:21,0:21:63.20:0,63,2746	0/0:17,0:16:51.15:0,51,2080	0/0:12,0:12:36.12:0,36,1755	0/0:21,0:21:63.11:0,63,2664	0/0:30,0:30:81.25:0,81,3662	1/1:1,4:5:9.03:273,9,0	1/1:0,2:2:6.02:182,6,0	0/0:32,0:32:84.29:0,84,3472	0/0:9,0:9:27.07:0,27,992	0/0:7,0:7:18.06:0,18,693	0/0:13,0:13:39.11:0,39,1742	0/0:5,0:5:15.05:0,15,739	0/0:11,0:11:27.09:0,27,1207	1/1:2,15:17:45.15:1363,45,0	0/0:6,0:6:18.06:0,18,893
chr10	89320809	.	ACCCCC	A	1138.67	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.540;DP=311;FS=26.627;HRun=13;HaplotypeScore=79.0189;InbreedingCoeff=0.7565;MQ=69.65;MQ0=1;MQRankSum=-6.160;QD=22.33;ReadPosRankSum=4.695;VQSLOD=0.3218;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:16:25.72:0,26,254	0/0:5,0:5:12.04:0,12,243	0/0:14,0:7:17.85:0,18,290	0/0:21,0:15:24.76:0,25,486	0/0:2,0:3:2.60:0,3,44	0/0:6,0:7:18.06:0,18,431	0/0:19,0:26:57.12:0,57,1105	1/1:3,10:13:27.01:436,27,0	0/0:5,0:10:18.06:0,18,271	0/0:6,0:7:18.06:0,18,359	0/0:1,0:3:3.01:0,3,52	0/0:18,0:17:33.10:0,33,569	0/0:7,0:8:18.06:0,18,367	0/0:13,0:16:30.99:0,31,558	0/0:7,0:7:18.06:0,18,388	0/0:11,0:12:27.09:0,27,613	0/0:17,0:17:41.45:0,41,930	0/0:13,0:22:52.08:0,52,779	1/1:9,5:14:11.97:205,12,0	1/1:2,3:5:6.02:103,6,0	0/0:14,0:18:28.03:0,28,280	0/0:1,0:2:5.96:0,6,43	0/0:4,0:4:6.02:0,6,116	0/0:4,0:6:9.03:0,9,204	0/0:4,0:4:6.01:0,6,79	0/0:9,0:10:18.06:0,18,330	1/1:5,13:19:33.01:543,33,0	0/0:4,0:4:12.04:0,12,229
chr10	89321883	.	T	TA	1551.66	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-6.501;DP=554;FS=2.294;HRun=10;HaplotypeScore=65.0219;InbreedingCoeff=0.7749;MQ=70.21;MQ0=0;MQRankSum=1.468;QD=14.78;ReadPosRankSum=-4.210;VQSLOD=2.9596;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:37:88.85:0,89,715	0/0:10,0:10:26.96:0,27,222	0/1:20,0:15:6.28:6,0,120	0/0:19,1:19:16.72:0,17,93	0/0:17,0:17:38.81:0,39,299	0/0:18,0:18:50.91:0,51,413	0/0:17,0:17:38.94:0,39,320	1/1:7,20:27:57.06:578,57,0	0/0:20,0:20:49.97:0,50,400	0/0:21,0:21:46.98:0,47,375	0/0:11,0:11:30.84:0,31,247	0/0:23,0:23:59.75:0,60,479	0/0:25,0:25:53.84:0,54,433	0/0:14,0:14:35.52:0,36,277	0/0:18,0:18:47.92:0,48,392	0/0:23,0:23:56.90:0,57,465	0/0:28,0:28:77.90:0,78,640	0/0:27,0:27:65.84:0,66,532	1/1:8,15:23:1.86:404,2,0	1/1:2,16:18:45.01:445,45,0	0/0:18,0:18:44.93:0,45,365	0/0:15,0:15:29.94:0,30,243	0/0:10,0:10:0.83:0,1,147	0/0:17,0:17:47.94:0,48,394	0/0:16,0:16:35.93:0,36,295	0/0:28,0:28:77.73:0,78,624	1/1:5,10:15:26.74:270,27,0	0/0:16,0:16:38.72:0,39,304
chr10	89322193	.	G	GA	760.66	PASS	AB=0.858;AC=16;AF=0.296;AN=54;BaseQRankSum=0.168;DP=443;FS=0.000;HRun=13;HaplotypeScore=81.0486;InbreedingCoeff=0.3046;MQ=46.60;MQ0=15;MQRankSum=-2.314;QD=4.07;ReadPosRankSum=-1.933;VQSLOD=0.8389;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:19.83:0,20,111	0/0:12,0:11:13.90:0,14,88	./.	0/1:10,0:2:0:0,0,0	0/1:5,10:15:18.81:140,0,19	0/0:16,0:18:27.25:0,27,175	0/0:12,0:13:24.83:0,25,156	0/1:18,0:22:4.51:5,0,11	1/1:4,3:7:9.01:84,9,0	0/1:12,1:13:11.23:11,0,71	0/0:9,0:11:20.91:0,21,116	1/1:12,0:11:8.74:74,9,0	0/0:9,0:10:7.86:0,8,47	1/1:12,7:19:32.19:232,32,0	0/0:9,0:10:13.89:0,14,87	0/0:15,0:15:31.49:0,31,208	0/0:37,0:38:65.39:0,65,424	0/1:24,6:26:25.92:230,0,26	0/0:13,0:14:7.82:0,8,22	0/0:15,0:15:1.55:0,2,4	0/0:9,0:9:5.63:0,6,28	1/1:5,3:7:9.69:69,10,0	0/0:12,0:13:13.55:0,14,83	0/1:23,0:23:12.69:13,0,100	0/1:4,10:13:8.31:58,0,8	0/0:10,0:13:18.37:0,18,100	0/0:14,0:16:6.43:0,6,27	0/1:9,0:8:6.38:6,0,74
chr10	89322206	.	AG	A	1501.74	PASS	AB=0.979;AC=15;AF=0.268;AN=56;BaseQRankSum=10.749;DP=472;FS=1.912;HRun=1;HaplotypeScore=61.1008;InbreedingCoeff=0.5749;MQ=55.86;MQ0=13;MQRankSum=-3.167;QD=7.66;ReadPosRankSum=-1.596;VQSLOD=0.2697;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:26:59.65:292,60,0	0/0:10,0:9:19.10:0,19,179	0/1:31,1:4:4.81:5,0,8	0/0:21,1:7:6.35:0,6,38	0/0:20,0:20:51.71:0,52,360	0/0:16,0:16:10.60:0,11,332	0/0:15,0:14:36.46:0,36,334	1/1:16,7:23:58.06:448,58,0	0/0:9,0:9:15.78:0,16,144	0/0:19,0:18:49.33:0,49,429	0/0:13,0:12:22.67:0,23,158	0/0:7,0:6:5.29:0,5,73	0/0:9,0:9:21.69:0,22,197	0/1:20,0:19:29.10:29,0,140	0/0:11,0:10:19.31:0,19,199	0/0:15,0:15:33.03:0,33,364	0/0:35,0:35:88.34:0,88,814	0/1:22,2:22:17.57:18,0,177	1/1:2,12:14:34.86:256,35,0	1/1:2,21:22:42.57:300,43,0	0/1:6,0:6:7.13:21,0,7	0/1:7,0:6:1.73:2,0,35	0/0:14,0:14:19.77:0,20,208	0/0:21,0:21:27.47:0,27,366	0/0:15,0:15:20.11:0,20,118	0/0:16,0:16:18.10:0,18,285	1/1:6,14:19:15.05:313,15,0	0/0:9,0:9:26.69:0,27,223
chr10	89322207	.	G	GA	1704.72	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=6.108;DP=476;FS=1.022;HRun=13;HaplotypeScore=61.9868;InbreedingCoeff=0.6644;MQ=58.26;MQ0=13;MQRankSum=-0.515;QD=11.00;ReadPosRankSum=-0.946;VQSLOD=2.9634;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:27:63.21:563,63,0	0/0:9,0:8:20.97:0,21,172	0/1:32,0:4:14.53:15,0,15	0/0:24,0:9:4.61:0,5,35	0/0:19,1:20:17.69:0,18,299	0/0:17,0:17:41.93:0,42,342	0/0:14,0:13:38.95:0,39,319	1/1:23,1:24:40.01:339,40,0	0/0:9,0:9:16.41:0,16,121	0/0:18,1:18:18.78:0,19,351	0/0:14,0:13:23.94:0,24,194	0/1:8,0:7:10.94:11,0,55	0/0:8,0:8:23.97:0,24,196	0/0:20,0:19:22.76:0,23,173	0/0:13,0:12:23.94:0,24,196	0/0:15,0:15:29.92:0,30,246	0/0:34,0:34:83.85:0,84,687	0/0:22,0:22:34.53:0,35,230	1/1:14,0:14:27.01:269,27,0	1/1:22,1:22:42.03:409,42,0	1/1:5,1:6:12.01:117,12,0	0/0:7,0:6:5.91:0,6,49	0/0:14,0:14:23.93:0,24,196	0/0:20,0:20:33.24:0,33,330	0/0:15,0:15:14.72:0,15,101	0/0:15,0:15:38.83:0,39,319	0/1:20,0:19:11.23:163,0,11	0/0:9,0:9:20.94:0,21,169
chr10	89322630	.	TA	T	1502.53	PASS	AB=0.908;AC=15;AF=0.268;AN=56;BaseQRankSum=7.454;DP=586;FS=11.768;HRun=13;HaplotypeScore=72.0389;InbreedingCoeff=0.5660;MQ=63.97;MQ0=3;MQRankSum=1.326;QD=8.35;ReadPosRankSum=2.509;VQSLOD=1.5740;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,25:30:56.39:416,56,0	1/1:3,10:13:20.77:153,21,0	0/1:17,1:15:4.55:5,0,134	0/1:8,0:4:1.88:2,0,21	0/0:18,1:19:20.16:0,20,358	0/1:20,3:23:14.65:15,0,353	0/1:9,1:10:3.63:4,0,178	0/0:32,2:30:19.08:0,19,455	0/0:18,0:18:45.03:0,45,421	0/0:17,0:17:27.03:0,27,257	0/0:22,3:26:31.50:0,31,428	0/0:26,0:26:44.21:0,44,525	0/0:24,0:24:48.07:0,48,462	0/0:11,0:11:27.02:0,27,252	1/1:4,15:19:37.57:268,38,0	0/0:25,0:25:57.08:0,57,550	1/1:0,28:30:79.59:575,80,0	0/0:22,0:22:39.06:0,39,379	0/0:19,2:22:3.91:0,4,320	0/0:31,2:33:40.11:0,40,614	1/1:3,12:16:31.83:225,32,0	0/0:20,1:21:27.98:0,28,416	0/0:17,1:17:20.16:0,20,358	0/0:24,0:24:48.08:0,48,467	0/0:8,2:12:2.54:0,3,169	0/0:29,1:31:43.21:0,43,533	0/0:20,1:22:19.98:0,20,338	0/1:9,2:11:20.65:21,0,166
chr10	89329497	.	TA	T	921.89	PASS	AB=0.929;AC=12;AF=0.214;AN=56;BaseQRankSum=7.848;DP=550;FS=8.707;HRun=14;HaplotypeScore=70.9411;InbreedingCoeff=0.4600;MQ=75.70;MQ0=6;MQRankSum=1.070;QD=5.80;ReadPosRankSum=0.018;VQSLOD=1.8941;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:13.35:0,13,224	0/0:6,0:6:11.98:0,12,104	0/0:26,0:13:8.87:0,9,59	0/1:16,0:13:23.68:24,0,51	0/1:22,4:26:11.66:12,0,355	0/0:17,0:19:31.09:0,31,239	0/0:12,0:15:2.97:0,3,144	1/1:12,9:21:10.87:129,11,0	0/1:16,2:18:15.17:15,0,275	0/0:17,1:20:24.36:0,24,344	0/0:18,0:18:48:0,48,429	0/0:13,1:18:9.23:0,9,204	0/0:16,0:16:42.01:0,42,376	0/0:17,0:17:18.45:0,18,310	0/1:18,1:19:5.64:6,0,267	0/0:23,1:26:42.27:0,42,514	0/0:31,0:32:62.70:0,63,650	0/0:17,0:20:43.34:0,43,357	1/1:4,16:20:47.09:309,47,0	1/1:5,15:21:45.40:307,45,0	0/0:14,1:15:4.39:0,4,76	0/0:16,0:18:28.10:0,28,236	0/0:16,3:19:3.85:0,4,308	0/0:28,0:28:59.71:0,60,521	0/0:12,2:15:0.70:0,1,271	0/0:23,0:23:30.86:0,31,419	1/1:0,16:16:41.44:287,41,0	0/0:8,0:8:16.55:0,17,138
chr10	89329647	.	CCT	C	5604.46	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=5.456;DP=506;FS=2.873;HRun=0;HaplotypeScore=70.9117;InbreedingCoeff=0.9975;MQ=64.51;MQ0=3;MQRankSum=-2.434;QD=41.82;ReadPosRankSum=3.923;VQSLOD=6.8675;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.20:0,87,1642	0/0:7,0:7:21.07:0,21,414	0/0:24,0:19:57.18:0,57,1036	0/0:24,0:16:44.90:0,45,727	1/1:0,24:23:63.22:1022,63,0	0/0:11,0:11:33.11:0,33,670	0/0:15,0:15:45.14:0,45,876	0/0:27,0:27:78.26:0,78,1536	1/1:0,20:20:48.16:780,48,0	0/0:14,0:14:42.14:0,42,853	0/0:13,0:13:39.09:0,39,674	1/1:0,10:10:21.07:342,21,0	0/0:14,0:14:42.14:0,42,841	1/1:0,22:22:63.22:1023,63,0	0/0:10,0:10:21.07:0,21,427	0/0:16,0:16:48.16:0,48,974	0/0:23,0:23:60.21:0,60,1201	1/1:0,25:25:72.25:1170,72,0	0/0:21,0:21:60.19:0,60,1178	0/0:11,0:11:33.10:0,33,626	0/0:24,0:24:69.21:0,69,1328	1/1:0,16:16:36.12:586,36,0	0/0:13,0:13:34:0,34,650	0/0:25,0:25:69.22:0,69,1363	1/1:0,17:17:42.14:681,42,0	0/0:20,0:20:57.16:0,57,1147	0/0:16,0:16:33.10:0,33,633	0/0:12,0:12:36.10:0,36,692
chr10	89329663	.	G	GA	970.72	PASS	AB=0.903;AC=19;AF=0.339;AN=56;BaseQRankSum=-0.196;DP=553;FS=4.324;HRun=14;HaplotypeScore=93.4916;InbreedingCoeff=0.2840;MQ=66.79;MQ0=1;MQRankSum=0.213;QD=3.90;ReadPosRankSum=-3.578;VQSLOD=0.6279;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:37:35.51:0,36,113	1/1:5,1:6:3:26,3,0	0/0:16,0:14:16.26:0,16,99	0/0:16,0:10:5.58:0,6,31	0/1:22,0:22:41.16:41,0,117	0/0:15,0:15:7.31:0,7,167	0/0:14,1:15:3.10:0,3,146	1/1:34,1:36:37.58:234,38,0	0/0:18,0:19:19.47:0,19,117	0/1:15,2:17:26.16:26,0,108	0/0:12,0:14:13.70:0,14,143	0/1:11,0:12:22.88:23,0,75	0/1:15,1:16:2.97:3,0,110	0/0:20,0:21:28.45:0,28,178	0/1:5,13:18:26.48:41,0,26	0/0:19,0:20:16.72:0,17,213	1/1:15,24:39:8.17:436,8,0	0/0:31,0:31:45.27:0,45,283	1/1:18,0:19:1.30:66,1,0	1/1:9,0:9:2.98:77,3,0	0/0:27,0:28:24.23:0,24,249	0/0:12,0:12:17.66:0,18,114	0/0:15,0:15:18.68:0,19,119	0/0:23,6:30:22.84:0,23,267	0/1:17,1:18:4.47:4,0,109	0/1:18,1:21:19.53:20,0,115	1/1:16,0:16:29.67:143,30,0	0/0:13,0:13:1.82:0,2,113
chr10	89329665	.	A	AG	2024.81	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.561;DP=556;FS=5.180;HRun=0;HaplotypeScore=88.9226;InbreedingCoeff=0.9875;MQ=67.57;MQ0=1;MQRankSum=2.764;QD=24.40;ReadPosRankSum=1.181;VQSLOD=4.4619;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:93.48:0,93,780	0/0:5,0:5:12.45:0,12,100	0/0:15,0:12:25.66:0,26,293	0/0:17,0:10:17.44:0,17,134	0/0:21,0:21:55.02:0,55,550	0/0:17,0:17:48.97:0,49,563	0/0:15,0:15:42.98:0,43,503	1/1:3,34:37:81.61:1027,82,0	0/0:20,0:20:52.88:0,53,540	0/0:15,0:15:41.89:0,42,452	0/0:14,0:14:39.89:0,40,434	0/0:13,0:13:36.40:0,36,350	0/0:16,0:16:43.75:0,44,465	0/0:24,0:24:62.98:0,63,665	0/0:19,0:19:24.78:0,25,217	0/0:22,0:22:58.28:0,58,680	0/0:37,0:37:34.32:0,34,300	0/0:31,0:31:93.10:0,93,1017	1/1:6,15:21:52.41:515,52,0	1/1:3,6:9:21.87:238,22,0	0/0:29,0:29:85.67:0,86,932	0/0:12,0:12:35.94:0,36,385	0/0:15,0:15:37.89:0,38,413	0/0:30,0:30:68.76:0,69,819	0/0:17,0:17:37.56:0,38,436	0/0:20,0:20:57.16:0,57,583	1/1:0,16:16:33.10:405,33,0	0/0:13,0:13:37.63:0,38,424
chr10	89329876	.	G	GA	519.83	PASS	AB=0.962;AC=3;AF=0.054;AN=56;BaseQRankSum=5.563;DP=599;FS=7.363;HRun=9;HaplotypeScore=86.0840;InbreedingCoeff=0.6378;MQ=63.93;MQ0=7;MQRankSum=-5.267;QD=11.06;ReadPosRankSum=-0.777;VQSLOD=2.5216;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:22:51.62:589,52,0	0/0:8,0:8:21:0,21,188	0/0:25,0:9:26.58:0,27,204	0/1:23,0:14:36.53:37,0,44	0/0:29,0:29:72.03:0,72,659	0/0:15,0:15:42.02:0,42,384	0/0:21,0:21:60.03:0,60,549	0/0:25,0:25:63.03:0,63,576	0/0:16,0:16:39.02:0,39,357	0/0:30,0:30:76.27:0,76,684	0/0:21,0:21:44.90:0,45,409	0/0:23,0:23:63:0,63,567	0/0:16,0:16:39:0,39,352	0/0:23,0:23:66.04:0,66,604	0/0:14,0:14:30.01:0,30,275	0/0:25,0:25:71.96:0,72,649	0/0:26,0:26:60.02:0,60,548	0/0:21,0:21:57:0,57,515	0/0:22,0:22:57.02:0,57,521	0/0:23,0:23:59.91:0,60,531	0/0:7,0:7:15:0,15,137	0/0:21,0:21:63:0,63,565	0/0:27,0:27:81.03:0,81,736	0/0:24,0:24:59.99:0,60,543	0/0:17,0:17:48.02:0,48,439	0/0:26,0:26:75.04:0,75,686	0/0:33,0:32:87.01:0,87,786	0/0:14,0:14:36.02:0,36,329
chr10	89329906	.	CAAA	C	198.57	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.916;DP=585;FS=12.186;HRun=6;HaplotypeScore=124.3107;InbreedingCoeff=0.9943;MQ=70.70;MQ0=4;MQRankSum=-5.600;QD=9.46;ReadPosRankSum=-1.808;VQSLOD=-0.5279;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:20:36.19:293,36,0	0/0:11,0:11:33.11:0,33,729	0/0:30,0:19:41.32:0,41,880	0/0:23,0:17:21.47:0,21,405	0/0:24,0:24:66.22:0,66,1451	0/0:17,0:17:45.15:0,45,1020	0/0:27,0:27:69.22:0,69,1460	0/0:26,0:26:72.25:0,72,1590	0/0:14,0:14:42.14:0,42,908	0/0:27,0:27:78.27:0,78,1766	0/0:15,0:15:45.15:0,45,998	0/0:28,0:28:84.27:0,84,1761	0/0:18,0:18:54.19:0,54,1224	0/0:24,0:24:66.21:0,66,1406	0/0:11,0:11:33.11:0,33,730	0/0:23,0:23:66.22:0,66,1415	0/0:23,0:23:60.21:0,60,1337	0/0:21,0:21:53.85:0,54,1145	0/0:28,0:28:84.28:0,84,1785	0/0:18,0:18:51.18:0,51,1136	0/0:10,0:10:27.05:0,27,523	0/0:21,0:21:60.21:0,60,1325	0/0:25,0:25:72.25:0,72,1612	0/0:18,0:18:51.14:0,51,1025	0/0:11,0:11:33.11:0,33,730	0/0:30,0:30:84.23:0,84,1773	0/0:26,0:26:78.25:0,78,1658	0/0:14,0:14:42.14:0,42,951
chr10	89329913	.	CAAAT	C	359.92	PASS	AB=0.548;AC=1;AF=0.018;AN=56;BaseQRankSum=6.741;DP=584;FS=0.820;HRun=0;HaplotypeScore=137.9017;InbreedingCoeff=0.0473;MQ=69.59;MQ0=2;MQRankSum=-5.174;QD=15.65;ReadPosRankSum=-3.205;VQSLOD=3.0305;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:4,19:22:14.28:434,0,14	0/0:12,0:12:36.12:0,36,1002	0/0:29,0:21:56.82:0,57,1337	0/0:17,0:11:15.40:0,15,386	0/0:27,0:27:77.99:0,78,1226	0/0:18,0:18:48.15:0,48,1292	0/0:21,0:21:63.21:0,63,1648	0/0:29,0:29:63.03:0,63,1098	0/0:13,0:13:37.01:0,37,680	0/0:28,0:28:84.28:0,84,2288	0/0:14,0:14:42.14:0,42,1203	0/0:27,0:27:57.24:0,57,1312	0/0:20,0:20:60.18:0,60,1648	0/0:22,0:22:57.19:0,57,950	0/0:11,0:11:33.11:0,33,936	0/0:23,0:23:69.22:0,69,1819	0/0:21,0:21:63.22:0,63,1761	0/0:22,0:22:31.36:0,31,742	0/0:30,0:30:60.71:0,61,1357	0/0:19,0:19:57.12:0,57,979	0/0:14,0:14:15.60:0,16,473	0/0:22,0:22:60.05:0,60,1104	0/0:26,0:26:78.27:0,78,2169	0/0:16,0:16:48.10:0,48,1214	0/0:11,0:11:33.06:0,33,547	0/0:30,0:30:90.29:0,90,2384	0/0:25,0:25:73.99:0,74,1233	0/0:14,0:14:42.14:0,42,1147
chr10	89330135	.	ACT	A	5824.29	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=5.260;DP=618;FS=7.693;HRun=0;HaplotypeScore=79.6969;InbreedingCoeff=0.7620;MQ=70.61;MQ0=15;MQRankSum=2.497;QD=15.83;ReadPosRankSum=1.790;VQSLOD=4.2465;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:42,1:42:84.70:1040,85,0	0/0:2,0:2:3.01:0,3,45	0/0:62,1:22:17.97:0,18,550	0/1:78,0:20:8.85:9,0,239	1/1:3,15:18:29.75:229,30,0	0/0:12,0:12:30.10:0,30,453	0/0:18,0:18:27.07:0,27,400	1/1:5,24:28:66.19:817,66,0	1/1:15,1:16:33.06:390,33,0	0/0:17,0:17:39.10:0,39,590	0/0:14,0:14:30.09:0,30,439	1/1:18,1:18:39.12:488,39,0	0/1:18,0:18:27.64:28,0,459	1/1:4,15:19:2.98:21,3,0	0/0:23,0:23:51.03:0,51,753	0/0:20,0:20:51.17:0,51,807	0/0:20,0:20:42.10:0,42,600	1/1:24,0:24:63.15:761,63,0	1/1:8,12:20:36.11:443,36,0	1/1:3,5:8:5.93:40,6,0	1/1:32,0:32:78.23:961,78,0	1/1:1,10:11:3.01:34,3,0	0/0:10,0:10:18.06:0,18,279	0/0:24,0:24:54.18:0,54,811	1/1:15,0:15:39.12:492,39,0	0/0:13,0:12:33.11:0,33,541	1/1:6,12:18:5.91:73,6,0	0/0:14,0:14:30.10:0,30,454
chr10	89330148	.	CCTCTCTCTCTCTCT	C	99.56	PASS	AB=1.000;AC=7;AF=0.167;AN=42;BaseQRankSum=1.782;DP=645;FS=8.121;HRun=0;HaplotypeScore=200.0546;InbreedingCoeff=0.1779;MQ=55.97;MQ0=38;MQRankSum=1.701;QD=0.88;ReadPosRankSum=1.238;VQSLOD=1.6419;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:37:24.43:0,24,190	./.	./.	./.	./.	0/0:13,0:13:18.06:0,18,382	0/0:19,0:18:12.04:0,12,288	0/0:37,0:35:4.83:0,5,44	0/1:19,0:17:24.40:24,0,71	0/0:22,0:19:18.06:0,18,616	./.	0/1:24,0:21:0.72:1,0,51	0/0:18,0:17:12.93:0,13,579	0/0:20,0:20:0.94:0,1,2	1/1:19,4:23:3.01:116,3,0	0/0:25,0:25:21.07:0,21,601	1/1:19,0:16:0.85:47,1,0	0/1:28,0:25:13.41:13,0,89	0/0:14,0:13:6.02:0,6,304	./.	0/0:32,0:31:14.88:0,15,256	0/0:15,0:15:3:0,3,26	./.	0/0:24,0:23:6.02:0,6,293	0/0:16,0:16:2.88:0,3,15	0/0:21,0:19:11.07:0,11,178	0/0:18,0:18:3.48:0,3,86	0/0:17,0:15:7.27:0,7,349
chr10	89331138	.	T	TC	2582.76	PASS	AB=0.720;AC=14;AF=0.250;AN=56;BaseQRankSum=-9.591;DP=572;FS=2.583;HRun=8;HaplotypeScore=61.2177;InbreedingCoeff=0.8128;MQ=89.65;MQ0=0;MQRankSum=-1.077;QD=18.72;ReadPosRankSum=1.220;VQSLOD=3.5693;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.04:0,66,603	0/0:10,0:11:11.52:0,12,222	0/0:23,0:24:32.14:0,32,392	0/0:32,0:31:49.08:0,49,423	1/1:2,8:10:24.07:277,24,0	0/0:26,0:26:62.91:0,63,565	0/0:28,0:28:75.02:0,75,681	0/0:25,0:25:57.01:0,57,518	1/1:2,12:14:30.09:346,30,0	0/0:19,0:19:54.01:0,54,485	0/0:6,0:6:9:0,9,82	1/1:3,21:24:45.13:519,45,0	0/0:14,0:14:42.02:0,42,384	1/1:4,25:29:41.73:730,42,0	0/0:29,0:29:84.04:0,84,768	0/0:24,0:24:66.03:0,66,604	0/0:27,0:27:75.04:0,75,686	1/1:2,17:19:17.58:457,18,0	0/0:20,0:20:47.99:0,48,433	0/0:14,0:14:42.02:0,42,384	0/0:49,0:49:99:0,114,1036	1/1:1,8:9:21.06:242,21,0	0/0:13,0:13:32.99:0,33,297	0/1:20,3:23:15.20:15,0,385	0/1:2,8:10:6.41:187,0,6	0/0:20,0:20:54.03:0,54,494	0/0:20,0:20:54.02:0,54,494	0/0:11,0:11:33.02:0,33,302
chr10	89331978	.	A	AACAT	1993.62	PASS	AC=16;AF=0.308;AN=52;BaseQRankSum=-2.507;DP=720;FS=0.615;HRun=0;HaplotypeScore=150.9015;InbreedingCoeff=0.8535;MQ=63.81;MQ0=4;MQRankSum=0.922;QD=9.32;ReadPosRankSum=-2.222;VQSLOD=2.8123;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:49,0:49:14.84:230,15,0	1/1:4,5:10:12.04:256,12,0	./.	./.	0/0:18,0:18:2.79:0,3,28	0/0:25,0:25:54.16:0,54,783	0/0:30,0:30:30.07:0,30,404	1/1:42,0:39:3.01:36,3,0	0/0:24,0:24:27.03:0,27,249	0/0:27,0:27:39.13:0,39,591	0/0:11,0:11:24.07:0,24,348	0/0:46,0:46:48.05:0,48,446	0/0:18,0:19:36.12:0,36,532	0/0:25,0:25:4.99:0,5,16	1/1:16,17:34:33.11:770,33,0	0/0:13,0:32:33.04:0,33,307	1/1:17,9:28:18.06:420,18,0	0/0:25,0:26:8.99:0,9,84	1/1:17,0:17:12:116,12,0	1/1:18,0:18:9.03:106,9,0	0/0:52,0:52:57.44:0,57,276	0/0:19,0:19:4.25:0,4,31	0/0:18,0:18:15.04:0,15,209	0/0:24,0:24:38.90:0,39,576	0/0:16,0:16:16.26:0,16,141	0/0:25,0:24:33.09:0,33,471	1/1:16,0:16:21.06:246,21,0	0/0:12,0:12:27.09:0,27,402
chr10	89332024	.	CATAAA	C	6843.70	PASS	AB=0.715;AC=17;AF=0.304;AN=56;BaseQRankSum=10.196;DP=678;FS=0.000;HRun=0;HaplotypeScore=146.8553;InbreedingCoeff=0.5758;MQ=62.85;MQ0=3;MQRankSum=1.915;QD=24.35;ReadPosRankSum=1.185;VQSLOD=4.4599;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:22.13:0,22,123	0/0:8,0:8:21:0,21,436	0/0:16,0:13:38.54:0,39,745	0/0:11,0:8:24.02:0,24,431	1/1:0,5:5:2.43:69,2,0	0/0:29,0:29:87.30:0,87,2553	0/0:43,0:43:99:0,126,3043	0/1:7,38:44:72.48:1880,0,72	1/1:1,22:23:27.09:609,27,0	0/0:24,0:24:72.25:0,72,1964	0/0:12,0:12:36.12:0,36,1032	1/1:1,36:37:51.18:1171,51,0	0/0:19,0:19:57.06:0,57,1582	0/1:1,17:18:1.01:125,0,1	0/0:28,0:28:63.16:0,63,1499	0/0:33,0:33:74.97:0,75,1103	0/0:36,0:36:93.31:0,93,2233	0/1:2,23:25:7.51:198,0,8	0/1:19,0:18:99:674,0,99	0/1:16,0:16:23.86:29,0,24	1/1:72,0:72:99:1539,109,0	1/1:0,11:11:5.88:136,6,0	0/0:7,0:7:21.07:0,21,606	0/0:33,0:33:87.30:0,87,2440	1/1:0,10:10:18.06:414,18,0	0/0:23,0:23:69.23:0,69,1928	0/0:16,0:16:17.62:0,18,88	0/0:12,0:12:36.12:0,36,1100
chr10	89332026	.	TA	T	4931.66	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=14.714;DP=677;FS=0.000;HRun=3;HaplotypeScore=112.7036;InbreedingCoeff=0.9335;MQ=62.94;MQ0=3;MQRankSum=1.948;QD=14.42;ReadPosRankSum=1.688;VQSLOD=3.9881;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:46,1:47:23.04:139,23,0	0/0:8,0:8:16.85:0,17,182	0/0:16,0:13:38.60:0,39,472	0/0:11,0:8:24.02:0,24,297	1/1:5,0:5:2.28:8,2,0	0/0:29,0:29:84.27:0,84,1187	0/0:43,0:43:99:0,117,1616	1/1:44,0:43:99:1316,104,0	1/1:23,0:23:22.77:84,23,0	0/0:24,0:24:69.23:0,69,981	0/0:13,0:13:36.11:0,36,500	1/1:37,0:37:42.05:174,42,0	0/0:20,0:20:56.22:0,56,778	1/1:17,1:18:9.03:105,9,0	0/0:28,0:28:60.10:0,60,663	0/0:33,0:33:64.65:0,65,595	0/0:36,0:36:93.26:0,93,1227	1/1:24,0:24:7.11:25,7,0	1/1:19,0:18:29.81:496,30,0	1/1:17,0:17:25.95:101,26,0	1/1:2,69:71:99:2249,184,0	1/1:11,0:11:5.60:44,6,0	0/0:7,0:7:18.06:0,18,258	0/0:32,0:32:83.98:0,84,1184	1/1:10,0:10:15.77:82,16,0	0/0:23,0:23:66.22:0,66,929	1/1:16,0:16:20.15:107,20,0	0/0:12,0:12:36.12:0,36,516
chr10	89332027	.	A	ACAT	4876.12	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=9.725;DP=678;FS=2.180;HRun=0;HaplotypeScore=132.1394;InbreedingCoeff=0.5411;MQ=63.17;MQ0=2;MQRankSum=3.293;QD=15.05;ReadPosRankSum=-0.062;VQSLOD=4.5602;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,46:48:20.57:498,21,0	0/1:8,0:8:68.10:108,0,68	0/0:16,0:13:38.90:0,39,484	0/0:11,0:8:24.04:0,24,303	0/0:5,0:5:2.85:0,3,19	0/0:31,0:31:87.28:0,87,1421	0/0:42,0:42:99:0,123,1763	1/1:40,0:39:99:1316,104,0	0/0:23,0:23:19.91:0,20,144	0/0:23,0:23:69.23:0,69,1149	0/0:14,0:14:39.12:0,39,617	0/0:37,0:37:13.08:0,13,264	0/0:21,0:21:57.19:0,57,946	1/1:18,0:18:5.29:66,5,0	0/1:29,0:29:99:234,0,312	0/0:33,0:33:69.19:0,69,907	0/1:39,0:39:67.34:67,0,981	0/0:24,0:24:8.90:0,9,59	1/1:0,15:17:51.15:708,51,0	1/1:1,16:18:9.03:218,9,0	1/1:70,0:70:77.26:1110,77,0	0/1:11,0:11:11.93:28,0,12	0/0:8,0:8:21.06:0,21,335	0/0:32,0:32:84.27:0,84,1337	0/1:10,0:10:16.18:16,0,74	0/0:22,0:22:66.22:0,66,1050	1/1:0,15:16:21.07:506,21,0	0/0:12,0:12:36.12:0,36,631
chr10	89332263	.	GGC	G	119.97	PASS	AB=1.000;AC=11;AF=0.229;AN=48;BaseQRankSum=1.924;DP=187;FS=0.000;HRun=0;HaplotypeScore=31.9974;InbreedingCoeff=0.1723;MQ=74.90;MQ0=21;MQRankSum=-2.358;QD=2.50;ReadPosRankSum=0.582;VQSLOD=0.9758;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:13.69:0,14,131	0/1:3,0:3:12.79:13,0,14	0/0:31,0:10:6.39:0,6,101	0/1:20,0:4:2.85:3,0,32	0/0:3,0:2:0.89:0,1,2	./.	0/0:6,1:6:2.50:0,2,9	0/0:7,0:7:2.71:0,3,22	0/0:6,1:7:2.95:0,3,25	0/0:2,0:1:2.97:0,3,20	0/0:3,0:2:3:0,3,25	0/0:5,0:5:3.84:0,4,21	1/1:4,0:3:1.80:11,2,0	1/1:5,0:4:1.25:3,1,0	0/0:9,0:9:3.25:0,3,68	0/0:6,0:6:5.38:0,5,32	0/0:15,0:15:1.88:0,2,55	1/1:8,3:9:3.91:146,4,0	0/1:2,0:2:13.85:16,0,14	0/0:1,0:1:2.74:0,3,12	0/0:13,0:13:2.28:0,2,26	./.	./.	0/0:2,0:2:4.77:0,5,24	./.	0/0:6,0:6:8.98:0,9,78	1/1:3,0:3:7.77:42,8,0	0/0:2,0:2:5.91:0,6,47
chr10	89332339	.	G	GA	822.16	PASS	AB=0.835;AC=17;AF=0.304;AN=56;BaseQRankSum=3.592;DP=316;FS=9.591;HRun=12;HaplotypeScore=68.0405;InbreedingCoeff=0.5139;MQ=58.83;MQ0=10;MQRankSum=-6.051;QD=8.56;ReadPosRankSum=-1.939;VQSLOD=1.4620;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:43.43:0,43,295	0/1:3,1:3:20.22:20,0,35	0/1:12,0:9:3.78:4,0,86	0/0:3,0:1:2.84:0,3,14	0/1:1,2:3:0:1,0,0	0/0:10,0:10:26.85:0,27,197	0/0:13,0:12:26.81:0,27,197	0/0:16,0:18:0.91:0,1,20	1/1:6,7:14:29.74:248,30,0	0/0:9,0:8:14.90:0,15,109	0/0:7,0:7:14.90:0,15,109	1/1:7,3:9:14.97:131,15,0	0/1:8,1:8:8.29:8,0,110	1/1:9,5:13:11.36:244,11,0	0/0:15,0:14:32.71:0,33,233	0/1:5,1:7:12.26:12,0,75	0/0:21,0:21:44.63:0,45,326	1/1:8,5:11:23.99:221,24,0	0/0:4,0:7:11.74:0,12,35	0/0:12,0:12:19.67:0,20,59	0/0:18,0:19:16.09:0,16,54	1/1:1,2:3:3:29,3,0	0/0:10,0:10:26.81:0,27,192	0/0:13,0:13:26.79:0,27,197	1/1:3,4:6:8.98:78,9,0	0/0:19,1:19:25.20:0,25,319	0/0:6,0:6:0.61:0,1,11	0/0:7,0:5:11.90:0,12,88
chr10	89332349	.	A	ATT	2611.66	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=9.992;DP=345;FS=10.719;HRun=0;HaplotypeScore=69.1176;InbreedingCoeff=0.4809;MQ=65.08;MQ0=6;MQRankSum=-7.457;QD=19.49;ReadPosRankSum=1.654;VQSLOD=2.8815;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:8.35:0,8,374	0/0:5,0:5:15.05:0,15,216	0/0:14,0:11:33.09:0,33,471	0/0:6,0:4:10.57:0,11,110	1/1:4,0:4:8.98:49,9,0	0/0:12,0:12:33.11:0,33,528	0/0:12,0:12:36.12:0,36,560	1/1:9,11:19:40.50:727,41,0	0/1:15,0:15:86.98:87,0,97	0/0:7,0:6:15.05:0,15,245	0/0:11,0:11:30.10:0,30,456	0/1:11,0:10:37.27:53,0,37	0/0:8,0:8:24.08:0,24,375	0/1:17,0:16:54.10:54,0,167	0/0:17,0:16:48.15:0,48,729	0/0:10,0:10:30.09:0,30,425	0/0:23,0:23:66.22:0,66,1036	0/1:12,0:11:48.75:49,0,115	1/1:3,4:7:5.63:190,6,0	1/1:1,11:12:32.92:529,33,0	1/1:1,16:17:42.06:693,42,0	0/1:3,0:3:5.17:5,0,54	0/0:12,0:12:34.36:0,34,522	0/0:12,0:12:33.11:0,33,525	0/1:10,0:9:9.22:87,0,9	0/0:24,0:23:69.23:0,69,1062	1/1:2,4:6:18.06:278,18,0	0/0:6,0:5:15.05:0,15,242
chr10	89332353	.	T	TAAAG	9364.19	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=1.947;DP=360;FS=6.582;HRun=0;HaplotypeScore=67.9007;InbreedingCoeff=0.9773;MQ=68.72;MQ0=2;MQRankSum=-8.125;QD=53.51;ReadPosRankSum=-1.504;VQSLOD=5.3523;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:6,21:27:51.05:1214,51,0	0/0:5,0:5:15.05:0,15,279	0/0:16,0:13:34.22:0,34,487	0/0:7,0:5:12.04:0,12,194	1/1:0,5:6:12.04:279,12,0	0/0:13,0:13:33.11:0,33,616	0/0:12,0:12:36.11:0,36,631	1/1:20,4:23:66.21:1391,66,0	1/1:3,9:13:30.10:769,30,0	0/0:7,0:6:15.05:0,15,280	0/0:12,0:12:33.11:0,33,598	1/1:5,7:11:30.10:698,30,0	0/0:9,0:9:27.08:0,27,471	1/1:6,8:16:29.91:616,30,0	0/0:18,0:17:45.15:0,45,833	0/0:11,0:11:33.10:0,33,565	0/0:22,0:22:66.23:0,66,1231	1/1:8,5:13:27.02:562,27,0	1/1:8,0:8:24.01:437,24,0	1/1:14,0:14:36.12:798,36,0	1/1:18,0:18:48.14:1092,48,0	1/1:2,2:4:12.04:243,12,0	0/0:12,0:12:33.11:0,33,615	0/0:11,0:11:27.09:0,27,504	1/1:3,8:11:30.10:721,30,0	0/0:25,0:25:57.14:0,57,962	1/1:8,1:9:24.08:543,24,0	0/0:5,0:5:12.03:0,12,193
chr10	89333711	.	GCCC	G	1877.73	PASS	AB=1.000;AC=13;AF=0.283;AN=46;BaseQRankSum=-0.593;DP=203;FS=13.257;HRun=11;HaplotypeScore=37.5982;InbreedingCoeff=0.7349;MQ=76.05;MQ0=0;MQRankSum=-1.106;QD=19.77;ReadPosRankSum=6.419;VQSLOD=-0.0898;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:5.95:0,6,58	./.	0/0:9,0:9:23.70:0,24,263	0/0:7,0:6:11.57:0,12,166	0/0:4,1:5:0:0,0,0	0/0:2,0:2:5.95:0,6,78	0/0:10,0:11:12:0,12,185	0/0:5,0:7:2.99:0,3,23	1/1:3,14:17:39.10:510,39,0	./.	./.	1/1:5,11:16:30.05:387,30,0	0/0:3,0:4:5.96:0,6,42	1/1:4,6:10:15:197,15,0	0/0:2,0:3:9.03:0,9,134	0/0:6,0:7:13.57:0,14,159	0/0:8,0:8:15.51:0,16,219	1/1:4,11:15:24.03:315,24,0	0/0:3,0:7:11.98:0,12,107	0/0:3,0:3:5.93:0,6,40	0/0:3,0:3:3.01:0,3,42	1/1:3,12:15:30.09:394,30,0	./.	0/0:7,0:7:6.49:0,6,115	1/1:5,9:14:18.03:236,18,0	0/1:8,0:8:0.01:0,0,0	0/0:4,0:7:17.98:0,18,151	./.
chr10	89336865	.	TTGG	T	1848.24	PASS	AB=0.978;AC=13;AF=0.232;AN=56;BaseQRankSum=8.031;DP=484;FS=0.000;HRun=0;HaplotypeScore=97.1737;InbreedingCoeff=0.0009;MQ=79.08;MQ0=2;MQRankSum=-4.337;QD=8.97;ReadPosRankSum=8.840;VQSLOD=2.0282;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.07:0,84,1393	0/0:7,0:7:18.89:0,19,112	0/0:39,0:30:74.72:0,75,1230	0/0:20,0:18:39.16:0,39,530	0/1:8,1:9:35.49:35,0,63	0/0:21,0:21:60.13:0,60,913	0/0:20,0:20:60.11:0,60,1037	0/1:24,2:26:99:323,0,100	0/1:17,0:17:8.69:184,0,9	0/0:4,0:4:12.03:0,12,181	0/0:1,0:1:3.01:0,3,46	1/1:23,0:23:29.90:270,30,0	0/0:18,0:18:53.94:0,54,962	0/1:9,0:9:1.46:110,0,1	0/0:28,0:28:61.19:0,61,288	0/0:19,0:19:40.01:0,40,842	0/0:22,0:22:40.89:0,41,201	0/1:21,0:21:75.28:163,0,75	0/1:15,0:15:99:135,0,119	0/1:12,1:13:14.50:155,0,15	0/1:21,0:21:5.11:188,0,5	0/1:18,0:18:99:140,0,113	0/0:11,0:11:30.07:0,30,502	0/0:15,0:14:33.08:0,33,631	0/1:13,0:13:46.25:101,0,46	0/0:14,0:14:42.05:0,42,559	0/1:21,0:21:23.18:202,0,23	0/0:11,0:11:26.87:0,27,518
chr10	89336866	.	TGGG	T	5516	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=0.088;DP=485;FS=7.055;HRun=10;HaplotypeScore=86.8409;InbreedingCoeff=0.9305;MQ=79.83;MQ0=2;MQRankSum=-2.726;QD=27.58;ReadPosRankSum=5.793;VQSLOD=3.2312;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:28:66.10:0,66,1072	0/0:2,0:6:9.23:0,9,40	0/0:38,0:29:54.59:0,55,952	0/0:22,0:20:33.62:0,34,535	1/1:3,5:8:6.01:81,6,0	0/0:21,0:21:45.12:0,45,759	0/0:20,0:20:42.12:0,42,763	1/1:7,19:26:57.16:764,57,0	1/1:3,14:17:36.11:486,36,0	0/0:5,0:5:9.02:0,9,126	0/0:0,0:1:3.01:0,3,41	1/1:1,22:23:54.17:736,54,0	0/0:21,0:21:57.18:0,57,998	1/1:1,7:8:21.07:286,21,0	0/0:4,0:27:23.54:0,24,54	0/0:22,1:23:7.21:0,7,777	0/0:1,0:20:19.94:0,20,45	1/1:5,16:21:42.12:573,42,0	1/1:6,9:15:27.08:368,27,0	1/1:3,10:13:30.02:383,30,0	1/1:0,19:19:39.08:532,39,0	1/1:5,12:17:30.09:409,30,0	0/0:11,0:12:27.06:0,27,441	0/0:12,0:14:27.04:0,27,452	1/1:4,9:13:21.06:284,21,0	0/0:14,0:14:22.31:0,22,356	1/1:2,18:20:45.15:614,45,0	0/0:12,0:12:27.05:0,27,493
chr10	89336874	.	GGGT	G	2370	PASS	AB=0.962;AC=22;AF=0.393;AN=56;BaseQRankSum=5.794;DP=463;FS=4.048;HRun=0;HaplotypeScore=95.8491;InbreedingCoeff=0.6589;MQ=84.33;MQ0=2;MQRankSum=-3.046;QD=11.85;ReadPosRankSum=7.193;VQSLOD=2.2230;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:62.54:0,63,889	0/0:6,0:6:8.61:0,9,25	0/0:36,0:26:23.99:0,24,878	0/0:27,0:25:49.49:0,49,746	1/1:8,0:8:8.67:60,9,0	0/0:18,0:18:42.10:0,42,677	0/0:19,0:19:51.07:0,51,832	0/1:26,0:25:32.73:284,0,33	0/1:17,1:18:2.08:245,0,2	0/0:3,0:3:5.99:0,6,64	0/0:2,0:2:5.90:0,6,37	1/1:24,0:24:9.60:346,10,0	0/0:22,0:22:60.02:0,60,1025	0/1:8,1:9:1.10:131,0,1	0/0:25,0:25:31.59:0,32,121	0/0:21,0:21:36.09:0,36,850	0/0:20,0:20:34.36:0,34,113	1/1:16,0:16:41.16:265,41,0	1/1:10,0:10:7.42:135,7,0	1/1:12,1:13:12.81:200,13,0	1/1:19,0:19:37.84:234,38,0	1/1:15,0:15:1.78:173,2,0	0/0:11,0:11:12.07:0,12,326	0/0:14,0:13:29.90:0,30,395	1/1:11,1:12:23.15:199,23,0	0/1:11,0:11:21.63:22,0,257	1/1:19,0:19:23.33:274,23,0	0/0:12,0:12:27.07:0,27,452
chr10	89337303	.	CACACAT	C	695.51	PASS	AB=0.949;AC=23;AF=0.442;AN=52;BaseQRankSum=5.664;DP=526;FS=8.946;HRun=0;HaplotypeScore=153.3235;InbreedingCoeff=-0.1592;MQ=43.75;MQ0=30;MQRankSum=-1.628;QD=1.88;ReadPosRankSum=-3.121;VQSLOD=1.4544;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:37:99:120,0,311	1/1:2,0:2:2.99:23,3,0	./.	./.	0/0:10,0:10:0.01:0,0,60	0/0:20,0:19:13.48:0,13,506	0/0:26,0:24:17.81:0,18,492	0/1:19,0:18:34.82:108,0,35	0/1:19,0:19:20.61:21,0,26	0/0:24,0:22:54.89:0,55,607	0/0:16,0:15:10.71:0,11,287	0/1:30,0:29:26.28:26,0,74	0/1:10,0:9:6.12:6,0,146	0/1:22,0:21:48.28:48,0,60	0/1:6,8:14:3.02:3,0,19	0/1:11,0:11:7.73:8,0,253	0/1:10,22:29:16.29:31,0,16	0/1:16,0:16:0.50:169,0,0	0/1:12,0:11:25.61:48,0,26	1/1:16,0:13:2.50:9,2,0	1/1:34,0:28:16.23:68,16,0	0/1:16,0:16:11.86:12,0,54	0/1:13,0:10:36.03:36,0,192	0/0:42,0:42:73.43:0,73,1266	0/1:21,0:21:3.42:3,0,35	0/1:27,0:23:9.39:9,0,460	1/1:13,0:13:11.44:101,11,0	0/0:17,0:15:28.75:0,29,560
chr10	89337307	.	CAT	C	882.28	PASS	AB=1.000;AC=25;AF=0.481;AN=52;BaseQRankSum=6.857;DP=528;FS=8.107;HRun=0;HaplotypeScore=125.7899;InbreedingCoeff=-0.1739;MQ=43.94;MQ0=28;MQRankSum=-2.158;QD=2.24;ReadPosRankSum=-0.749;VQSLOD=1.8997;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:37:17.67:193,18,0	1/1:3,0:3:5.96:43,6,0	./.	./.	0/0:11,0:11:3:0,3,84	0/0:19,0:18:1.93:0,2,294	0/0:24,0:22:17.42:0,17,307	0/1:18,0:17:40.13:116,0,40	0/1:19,0:19:16.51:17,0,24	0/0:25,0:23:31.05:0,31,323	0/0:16,0:15:10.50:0,11,171	0/1:30,0:29:26.41:26,0,73	0/1:10,0:9:21.28:21,0,69	0/1:21,0:20:46.70:47,0,60	0/1:14,0:14:3.02:3,0,19	0/1:12,0:12:39.87:40,0,146	0/1:33,0:30:15.94:33,0,16	0/1:16,0:16:0.26:151,0,0	0/1:13,0:12:40.93:61,0,41	1/1:16,0:13:2.43:9,2,0	1/1:36,0:30:18.35:77,18,0	0/1:19,0:19:15.23:15,0,73	0/1:13,0:10:45.99:46,0,100	0/0:31,8:39:33.20:0,33,681	0/1:21,0:21:3.42:3,0,35	0/1:30,0:26:31.89:32,0,260	1/1:12,0:12:11.58:75,12,0	0/1:17,0:15:33.64:34,0,163
chr10	89337309	.	TAC	T	826.01	PASS	AB=0.985;AC=20;AF=0.385;AN=52;BaseQRankSum=1.903;DP=534;FS=0.652;HRun=0;HaplotypeScore=127.1299;InbreedingCoeff=0.0074;MQ=44.29;MQ0=28;MQRankSum=0.374;QD=2.60;ReadPosRankSum=-0.329;VQSLOD=1.8587;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:37:29.43:248,0,29	0/0:3,0:3:1.55:0,2,4	./.	./.	0/0:11,0:11:14.79:0,15,187	0/0:20,0:19:27.96:0,28,381	0/1:23,0:21:6.72:7,0,312	1/1:12,7:18:3.07:203,3,0	0/0:17,1:18:7.70:0,8,80	0/0:27,0:25:1.20:0,1,321	0/0:16,0:15:18.02:0,18,212	0/1:29,2:30:8.14:8,0,223	0/0:9,3:11:10.46:0,10,136	0/0:21,0:20:17.20:0,17,184	0/0:14,0:14:5.61:0,6,53	0/1:12,0:12:14.13:14,0,102	0/0:32,0:30:3.48:0,3,46	0/1:15,0:15:7.70:8,0,59	1/1:11,2:12:5.90:65,6,0	1/1:10,6:13:2.95:34,3,0	1/1:27,9:30:21.20:214,21,0	0/1:19,0:19:19.21:19,0,143	0/1:14,0:11:35.12:35,0,115	0/0:40,0:40:27.19:0,27,719	0/1:18,2:20:22.91:23,0,72	0/1:30,0:26:68.22:68,0,191	1/1:3,8:12:2.75:22,3,0	0/1:16,0:15:12.39:12,0,228
chr10	89337930	.	A	AC	1017.56	PASS	AB=0.861;AC=8;AF=0.143;AN=56;BaseQRankSum=1.589;DP=615;FS=1.308;HRun=2;HaplotypeScore=97.6821;InbreedingCoeff=0.6810;MQ=83.52;MQ0=0;MQRankSum=-1.977;QD=9.51;ReadPosRankSum=-5.350;VQSLOD=-0.6030;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:88.11:0,88,489	0/0:10,0:10:20.20:0,20,111	0/0:21,0:21:56.99:0,57,656	0/0:21,0:21:58.35:0,58,666	0/0:15,0:15:36.42:0,36,208	0/0:19,0:19:57.16:0,57,692	0/0:29,0:29:81.22:0,81,978	1/1:12,13:25:41.61:491,42,0	0/0:19,0:19:50.58:0,51,268	0/0:23,0:23:69.21:0,69,846	0/0:9,0:9:27.08:0,27,333	0/0:24,0:24:59.63:0,60,327	0/0:24,0:24:63:0,63,760	0/1:30,0:30:4.49:4,0,250	0/0:35,0:35:77.82:0,78,412	0/0:24,0:23:69.22:0,69,855	0/0:40,0:40:92.10:0,92,497	0/0:16,0:16:42.27:0,42,236	0/1:8,5:13:4.02:148,0,4	1/1:11,8:19:3.03:313,3,0	0/0:36,0:36:91.68:0,92,499	0/0:22,0:22:43.12:0,43,275	0/0:14,0:14:39.12:0,39,480	0/0:20,0:20:57.17:0,57,694	0/0:14,0:14:36.24:0,36,202	0/0:27,0:27:81.25:0,81,1000	1/1:8,11:20:4.55:193,5,0	0/0:10,0:10:30.09:0,30,370
chr10	89339026	.	G	GAC	4666.88	PASS	AB=0.767;AC=15;AF=0.268;AN=56;BaseQRankSum=-1.696;DP=944;FS=2.300;HRun=0;HaplotypeScore=145.1729;InbreedingCoeff=0.7183;MQ=53.69;MQ0=16;MQRankSum=0.380;QD=14.14;ReadPosRankSum=3.995;VQSLOD=5.0237;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,114,1301	0/0:10,0:10:11.75:0,12,240	0/0:44,0:23:22.55:0,23,196	0/0:44,0:20:19.99:0,20,212	0/1:17,9:25:3.29:416,0,3	0/0:33,0:35:71.88:0,72,817	0/0:38,0:39:96.06:0,96,1079	0/0:40,0:39:62.98:0,63,689	1/1:7,22:29:9.20:635,9,0	0/0:24,0:24:48.10:0,48,549	0/0:20,0:20:48.11:0,48,541	1/1:17,22:39:45.14:688,45,0	0/0:25,0:25:51.10:0,51,594	1/1:10,21:30:33.09:503,33,0	0/0:26,0:26:56.19:0,56,690	0/0:34,1:34:27.22:0,27,791	0/0:42,0:44:99:0,108,1219	1/1:13,21:34:7.36:560,7,0	0/1:25,1:19:17.94:18,0,274	0/0:18,0:18:32.42:0,32,335	0/1:26,53:79:8.86:827,0,9	1/1:12,21:33:6.03:587,6,0	0/0:20,0:19:33.08:0,33,381	0/0:72,0:74:99:0,174,1974	1/1:13,17:30:27.09:432,27,0	0/0:30,0:31:75.03:0,75,875	0/0:16,0:16:30.07:0,30,359	0/0:11,0:12:26.87:0,27,275
chr10	89339069	.	A	ACACACACAGACA	4225.24	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=8.566;DP=1000;FS=12.031;HRun=0;HaplotypeScore=298.0397;InbreedingCoeff=0.7659;MQ=49.71;MQ0=18;MQRankSum=-7.881;QD=8.86;ReadPosRankSum=-5.389;VQSLOD=1.1166;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,117,2997	0/0:10,0:10:18.05:0,18,475	0/1:56,0:13:0.92:1,0,47	0/0:63,0:17:1.59:0,2,70	1/1:24,0:24:6.01:143,6,0	0/0:23,0:22:54.17:0,54,1514	0/0:43,0:43:59.99:0,60,1368	1/1:54,0:51:64.24:1069,64,0	1/1:31,0:31:14.19:262,14,0	0/0:26,0:26:56.80:0,57,1231	0/0:20,0:20:36.11:0,36,1024	1/1:24,14:40:14.45:174,14,0	0/0:20,0:20:40.69:0,41,1201	1/1:35,0:34:15.52:316,16,0	0/0:21,0:21:45.07:0,45,1002	0/0:35,0:35:75.24:0,75,2122	0/0:53,0:53:96.26:0,96,2523	0/1:25,0:25:10.55:510,0,11	1/1:30,0:27:39.05:815,39,0	1/1:17,0:17:6.02:108,6,0	1/1:68,0:63:11.76:114,12,0	1/1:40,0:40:9:92,9,0	0/0:15,0:15:30.09:0,30,818	0/0:84,0:84:99:0,169,4571	1/1:32,0:32:2.99:26,3,0	0/0:41,0:41:66.16:0,66,1454	1/1:23,0:23:4.61:596,5,0	0/0:15,0:15:27.08:0,27,844
chr10	89339088	.	CAT	C	1785.52	PASS	AB=0.821;AC=18;AF=0.321;AN=56;BaseQRankSum=7.854;DP=919;FS=8.491;HRun=0;HaplotypeScore=153.7230;InbreedingCoeff=0.3970;MQ=49.62;MQ0=20;MQRankSum=-3.018;QD=4.44;ReadPosRankSum=-5.573;VQSLOD=0.1433;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,157,2631	0/0:7,0:7:18.06:0,18,346	0/0:33,0:6:12.21:0,12,169	0/0:42,0:10:17.96:0,18,140	1/1:20,5:25:5.60:70,6,0	0/0:24,0:24:60.17:0,60,1069	0/0:30,0:30:81.12:0,81,1489	0/1:40,5:41:99:354,0,1227	0/1:21,13:34:6.63:155,0,7	0/0:28,0:28:81:0,81,1424	0/0:16,0:16:37.12:0,37,649	1/1:42,5:46:14.41:173,14,0	0/0:20,0:20:53.13:0,53,1001	1/1:27,7:33:3.12:204,3,0	0/0:27,0:27:66.13:0,66,1097	0/0:33,0:33:93.28:0,93,1637	0/0:51,0:51:99:0,135,2294	0/1:13,9:23:59.79:299,0,60	0/1:28,6:29:99:222,0,623	1/1:15,5:20:6.02:89,6,0	0/1:49,3:45:41.62:100,0,42	1/1:27,10:37:8.63:91,9,0	0/0:14,0:14:39.10:0,39,629	0/0:80,0:80:99:0,206,3582	1/1:14,15:29:2.94:26,3,0	0/0:37,0:37:99:0,111,1794	0/1:16,6:22:99:178,0,107	0/0:15,0:15:45.15:0,45,849
chr10	89339102	.	CACAG	C	615.75	PASS	AB=0.910;AC=12;AF=0.214;AN=56;BaseQRankSum=9.380;DP=924;FS=2.169;HRun=0;HaplotypeScore=172.1843;InbreedingCoeff=0.4475;MQ=47.95;MQ0=24;MQRankSum=-8.747;QD=2.51;ReadPosRankSum=-1.027;VQSLOD=2.3189;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:64:99:0,153,3373	0/0:7,0:7:11.97:0,12,169	0/0:42,0:8:17.19:0,17,196	0/0:38,0:7:7.96:0,8,118	1/1:19,5:24:2.99:24,3,0	0/0:28,0:28:54.04:0,54,902	0/0:38,0:38:99:0,99,1842	0/1:34,0:31:18.27:18,0,248	1/1:25,7:32:2.45:19,2,0	0/0:24,0:24:60.14:0,60,1296	0/0:14,0:14:42.04:0,42,829	0/1:35,10:44:2.65:23,0,3	0/0:19,0:19:42.10:0,42,938	1/1:30,5:34:2.41:47,2,0	0/0:25,0:24:56.91:0,57,1180	0/0:35,0:35:84.19:0,84,1921	0/0:55,0:55:99:0,141,2940	0/1:20,4:24:34.88:179,0,35	0/1:26,1:23:5.72:175,0,6	0/0:17,7:24:0:0,0,0	0/0:43,3:39:2.93:0,3,20	0/0:32,3:35:0:0,0,0	0/0:17,0:17:48.10:0,48,969	0/0:81,0:81:99:0,198,3721	0/0:26,2:28:0:0,0,0	0/0:41,0:40:96.21:0,96,1880	1/1:21,3:24:17.96:275,18,0	0/0:18,0:18:27.95:0,28,1049
chr10	89339106	.	G	GACAGACAGAC	4332.84	PASS	AB=0.980;AC=18;AF=0.321;AN=56;BaseQRankSum=5.512;DP=925;FS=2.295;HRun=0;HaplotypeScore=238.5535;InbreedingCoeff=0.7306;MQ=47.90;MQ0=28;MQRankSum=-9.271;QD=13.76;ReadPosRankSum=-3.505;VQSLOD=3.4325;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,153,4183	0/0:6,0:6:11.93:0,12,228	0/0:45,0:8:3.69:0,4,198	0/0:43,0:9:12.55:0,13,183	0/1:26,0:26:0.10:0,0,0	0/0:24,0:24:48.14:0,48,1128	0/0:40,0:40:99:0,99,2387	1/1:35,0:30:42.07:567,42,0	1/1:28,1:30:5.47:145,5,0	0/0:25,0:25:57.18:0,57,1574	0/0:16,0:16:44.73:0,45,1058	1/1:38,3:41:6.16:66,6,0	0/0:18,0:18:42.13:0,42,1121	1/1:32,1:34:9.21:133,9,0	0/0:25,0:24:54.16:0,54,1519	0/0:32,0:32:84.26:0,84,2258	0/0:57,0:57:99:0,139,3645	0/1:23,1:24:7.99:943,0,8	1/1:23,0:21:42.10:1285,42,0	0/0:22,1:25:0:0,0,0	1/1:47,0:40:6:72,6,0	0/0:36,1:37:0.47:0,0,1	0/0:17,0:17:48.15:0,48,1288	0/0:79,0:79:99:0,181,4709	1/1:24,2:27:0.47:1,0,0	0/0:40,0:39:90.30:0,90,2371	1/1:23,1:25:15.75:1120,16,0	0/0:17,0:18:26.68:0,27,1293
chr10	89339114	.	GAC	G	82.62	PASS	AB=0.991;AC=6;AF=0.107;AN=56;BaseQRankSum=7.153;DP=924;FS=3.523;HRun=0;HaplotypeScore=163.1384;InbreedingCoeff=0.1734;MQ=48.14;MQ0=24;MQRankSum=-5.510;QD=0.54;ReadPosRankSum=-1.268;VQSLOD=2.3550;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,1:59:99:0,109,2291	0/0:4,0:4:6.02:0,6,100	0/0:46,0:7:6.25:0,6,76	0/0:49,0:11:17.68:0,18,214	0/0:28,0:28:8.66:0,9,103	0/0:24,0:23:42.13:0,42,656	0/0:39,0:39:96.26:0,96,1552	0/1:37,0:32:30.11:30,0,498	0/0:32,0:33:6.21:0,6,33	0/0:24,0:24:63.21:0,63,1016	0/0:17,0:16:39.10:0,39,598	0/0:36,0:35:0.95:0,1,14	0/0:20,0:20:47.52:0,48,730	1/1:33,0:33:2.14:5,2,0	0/0:24,0:23:57.19:0,57,939	0/0:34,0:34:90.17:0,90,1394	0/0:56,0:56:99:0,138,2242	0/1:22,0:22:99:105,0,101	0/0:28,0:23:13.54:0,14,255	0/0:25,0:25:3.01:0,3,42	0/0:41,1:37:8.98:0,9,89	0/1:34,0:34:0.15:0,0,0	0/0:18,1:19:9.96:0,10,704	0/0:80,1:81:99:0,118,2768	0/0:27,0:27:0:0,0,0	0/0:36,1:36:57.73:0,58,1434	0/1:26,0:27:43.78:44,0,142	0/0:19,0:19:30.51:0,31,682
chr10	89339116	.	C	CAG	222.87	PASS	AB=0.981;AC=8;AF=0.143;AN=56;BaseQRankSum=6.594;DP=941;FS=4.917;HRun=0;HaplotypeScore=167.1703;InbreedingCoeff=0.2013;MQ=48.21;MQ0=24;MQRankSum=-6.536;QD=1.00;ReadPosRankSum=-2.216;VQSLOD=2.2079;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,157,2207	0/0:4,0:4:11.98:0,12,137	0/0:45,0:7:0.44:0,0,159	0/0:52,0:13:19.81:0,20,233	0/0:27,0:27:9.03:0,9,103	0/0:24,0:23:57.10:0,57,744	0/0:40,0:40:99:0,111,1558	0/1:43,0:38:51.31:51,0,864	0/0:33,0:33:8.89:0,9,48	0/0:25,0:25:69.21:0,69,989	0/0:18,0:17:47.29:0,47,602	0/1:37,0:36:0.20:0,0,15	0/0:22,0:22:59.50:0,60,784	1/1:33,1:33:3.27:16,3,0	0/0:25,0:24:60.19:0,60,892	0/0:34,0:34:99:0,99,1370	0/0:55,0:54:99:0,147,2145	0/1:19,2:21:54.38:230,0,54	0/0:27,0:23:46.82:0,47,443	0/0:24,0:24:3.01:0,3,42	0/0:37,6:38:11.92:0,12,150	0/1:33,0:34:0:0,0,0	0/0:20,0:20:15.95:0,16,694	0/0:80,0:81:99:0,221,2934	0/1:27,0:27:0:0,0,0	0/0:39,0:38:73.36:0,73,1480	0/1:27,0:27:34:34,0,193	0/0:21,0:21:57.57:0,58,759
chr10	89339122	.	CACACAT	C	776.59	PASS	AB=0.960;AC=9;AF=0.161;AN=56;BaseQRankSum=9.666;DP=931;FS=17.181;HRun=0;HaplotypeScore=217.5939;InbreedingCoeff=0.1321;MQ=49.47;MQ0=26;MQRankSum=-8.808;QD=3.02;ReadPosRankSum=-0.965;VQSLOD=0.9284;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:65:99:0,165,4882	0/0:4,0:4:9.02:0,9,199	0/1:47,0:9:20.17:20,0,234	0/0:55,0:17:21.84:0,22,445	0/0:26,1:27:11.84:0,12,126	0/0:21,0:20:48.13:0,48,1301	0/0:41,0:41:99:0,111,3262	0/0:43,0:38:83.87:0,84,1902	0/1:33,1:34:32.43:48,0,32	0/0:25,0:25:74.84:0,75,2205	0/0:18,0:17:51.04:0,51,1282	0/1:32,1:32:16.71:38,0,17	0/0:22,0:22:59.96:0,60,1556	1/1:35,1:35:8.59:54,9,0	0/0:23,0:22:60.21:0,60,1950	0/0:33,0:33:96.20:0,96,2780	0/0:58,0:57:99:0,131,4627	0/1:19,0:19:75.38:237,0,75	0/1:23,3:21:99:344,0,413	0/0:23,1:24:3.01:0,3,81	0/0:41,0:36:9.03:0,9,198	0/1:31,3:34:0.42:0,0,0	0/0:21,0:21:55.40:0,55,1657	0/0:72,0:72:99:0,197,5930	0/0:21,2:23:0:0,0,0	0/0:38,0:37:99:0,104,3109	0/1:27,1:28:99:169,0,286	0/0:20,0:20:42.56:0,43,1644
chr10	89339130	.	GAC	G	563.01	PASS	AB=0.754;AC=10;AF=0.179;AN=56;BaseQRankSum=7.197;DP=916;FS=3.404;HRun=0;HaplotypeScore=176.7878;InbreedingCoeff=0.4816;MQ=50.73;MQ0=23;MQRankSum=-3.895;QD=2.98;ReadPosRankSum=-0.166;VQSLOD=2.7927;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:68,0:67:99:0,152,2416	0/0:3,0:3:6.02:0,6,100	0/0:47,0:9:11.32:0,11,170	0/0:55,0:19:20.82:0,21,254	0/1:10,13:23:38.05:103,0,38	0/0:20,1:20:3.91:0,4,557	0/0:42,0:42:99:0,105,1710	0/0:54,0:49:99:0,141,2209	1/1:14,17:31:8.47:96,8,0	0/0:27,0:27:63.22:0,63,1047	0/0:14,0:14:30.08:0,30,471	1/1:8,19:26:8.21:93,8,0	0/0:19,0:19:43.10:0,43,766	1/1:15,18:32:9.34:114,9,0	0/0:26,1:27:37.29:0,37,1046	0/0:33,0:33:78.14:0,78,1152	0/0:61,1:61:99:0,110,2252	0/1:9,8:17:70.79:291,0,71	0/1:27,1:22:2.75:3,0,337	0/0:25,0:25:3.01:0,3,50	0/0:40,0:36:12.04:0,12,200	0/1:19,11:30:0.15:0,0,0	0/0:22,0:22:60.14:0,60,874	0/0:70,0:70:99:0,131,2526	0/0:8,9:17:0:0,0,0	0/0:33,0:33:82.85:0,83,1288	0/0:28,0:28:37.18:0,37,452	0/0:18,0:18:49.41:0,49,805
chr10	89339154	.	CACAG	C	2645.48	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=11.050;DP=865;FS=1.961;HRun=0;HaplotypeScore=194.6922;InbreedingCoeff=0.8782;MQ=49.63;MQ0=25;MQRankSum=-5.397;QD=7.13;ReadPosRankSum=-4.545;VQSLOD=2.0263;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:58:96.22:0,96,1912	0/0:8,0:8:17.91:0,18,280	0/0:22,0:6:5.98:0,6,47	0/0:40,0:13:2.26:0,2,14	1/1:26,3:29:27.51:353,28,0	0/0:21,0:20:32.61:0,33,781	0/0:41,0:41:72.16:0,72,1355	1/1:64,0:59:61.30:443,61,0	1/1:21,8:29:18.06:294,18,0	0/0:27,0:27:62.33:0,62,1091	0/0:14,0:14:29.83:0,30,447	1/1:30,1:31:24.68:325,25,0	0/0:21,0:21:40.30:0,40,841	1/1:30,8:37:26.58:392,27,0	0/0:27,0:26:53.99:0,54,765	0/0:29,0:29:66.09:0,66,1142	0/0:55,0:54:99:0,102,1502	1/1:20,3:22:39.79:467,40,0	1/1:29,0:25:22.80:174,23,0	0/1:26,0:24:0:0,0,0	1/1:36,0:31:8.98:72,9,0	1/1:24,5:29:8.56:130,9,0	0/0:22,0:22:51.11:0,51,881	0/0:56,0:56:99:0,111,1839	1/1:8,5:13:5.84:94,6,0	0/0:35,0:34:5.78:0,6,765	1/1:24,0:24:11.91:113,12,0	0/0:16,0:16:27:0,27,439
chr10	89339166	.	G	GAC	203	PASS	AB=0.969;AC=6;AF=0.107;AN=56;BaseQRankSum=7.056;DP=808;FS=1.734;HRun=0;HaplotypeScore=173.8424;InbreedingCoeff=0.0778;MQ=50.72;MQ0=24;MQRankSum=-6.640;QD=1.34;ReadPosRankSum=-2.188;VQSLOD=2.6157;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,119,1866	0/0:9,0:9:21.07:0,21,299	0/0:18,0:7:8.87:0,9,121	0/0:27,0:10:5.84:0,6,69	0/0:25,0:25:26.79:0,27,238	0/0:26,0:25:72.21:0,72,1010	0/0:41,0:41:99:0,108,1529	0/1:54,0:51:99:150,0,448	0/0:31,0:31:35.60:0,36,312	0/0:30,0:30:84.25:0,84,1150	0/0:14,0:14:29.89:0,30,430	0/0:31,0:31:32.54:0,33,279	0/0:21,0:21:57.16:0,57,778	0/0:29,0:28:24.11:0,24,196	0/0:26,0:25:62.92:0,63,863	0/0:30,0:29:75.72:0,76,1064	0/0:54,0:51:99:0,123,1685	0/1:24,1:24:70.44:70,0,460	0/1:25,1:26:41.65:42,0,272	1/1:26,0:24:1.82:5,2,0	0/0:32,3:27:8.67:0,9,107	0/0:27,0:27:23.95:0,24,279	0/0:24,0:24:60.20:0,60,857	0/0:52,0:52:99:0,117,1652	0/0:13,0:13:11.93:0,12,106	0/0:29,0:28:78.25:0,78,1081	0/1:19,1:20:48.42:48,0,114	0/0:11,0:11:33.06:0,33,430
chr10	89339170	.	GACAGACACACACACAC	G	2874.19	PASS	AB=0.986;AC=10;AF=0.179;AN=56;BaseQRankSum=10.117;DP=780;FS=24.464;HRun=0;HaplotypeScore=319.6557;InbreedingCoeff=0.7871;MQ=49.68;MQ0=25;MQRankSum=-6.170;QD=16.71;ReadPosRankSum=-5.651;VQSLOD=0.2838;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:53:99:0,135,7262	0/0:10,0:10:23.95:0,24,1118	0/0:13,0:5:10.22:0,10,162	0/0:24,0:7:8.86:0,9,176	0/0:23,0:23:25.85:0,26,1007	0/0:28,0:27:75.24:0,75,3634	0/0:38,0:38:99:0,102,4619	1/1:11,37:45:99:1470,105,0	0/0:31,0:32:36.39:0,36,1305	0/0:31,0:31:93.30:0,93,4928	0/0:14,0:14:33.36:0,33,1386	0/0:30,0:30:22.86:0,23,1238	0/0:22,0:22:60.14:0,60,2985	0/0:25,0:25:11.21:0,11,944	0/0:26,0:25:61.04:0,61,2760	0/0:30,0:29:81.70:0,82,4222	0/0:54,0:51:99:0,123,6146	0/1:25,0:24:0.62:1,0,1357	1/1:4,18:21:56.71:876,57,0	1/1:8,17:23:3.01:89,3,0	0/1:32,1:27:0.70:60,0,1	0/0:25,0:25:29.27:0,29,995	0/0:24,0:24:66.20:0,66,3374	0/0:49,0:49:99:0,123,6479	0/0:14,0:14:20.83:0,21,788	0/0:30,0:30:87.26:0,87,3722	1/1:4,13:17:14.46:532,14,0	0/0:10,0:10:30.03:0,30,1606
chr10	89339174	.	GAC	G	191.98	PASS	AB=0.943;AC=14;AF=0.250;AN=56;BaseQRankSum=8.407;DP=774;FS=1.160;HRun=0;HaplotypeScore=158.7459;InbreedingCoeff=-0.0327;MQ=49.47;MQ0=25;MQRankSum=-0.408;QD=0.57;ReadPosRankSum=4.518;VQSLOD=2.5628;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,1:54:20.99:0,21,1242	0/0:11,0:11:21.05:0,21,297	0/0:14,0:6:6.49:0,6,83	0/1:22,0:6:3.77:4,0,67	0/1:24,1:25:22.42:22,0,38	0/0:29,1:29:17.73:0,18,796	0/0:34,1:35:11.23:0,11,696	0/0:40,0:37:21.63:0,22,95	0/1:28,1:29:26.40:26,0,204	0/0:27,1:31:40.19:0,40,950	0/0:14,0:14:13.16:0,13,274	0/1:29,1:30:10.94:11,0,171	0/0:20,3:23:12.37:0,12,561	1/1:27,0:26:0.90:11,1,0	0/0:23,3:26:4.28:0,4,477	0/1:27,3:29:9.87:10,0,712	0/1:40,10:48:99:112,0,817	0/0:24,1:24:9.36:0,9,228	0/1:22,0:21:0.17:0,0,36	0/0:24,0:22:2.88:0,3,15	0/1:32,0:25:0:0,0,0	0/0:24,1:25:1.11:0,1,254	0/0:24,1:25:22.36:0,22,740	0/0:47,3:50:43.39:0,43,1049	0/1:12,1:13:20.08:20,0,157	0/1:31,3:34:76.56:77,0,665	1/1:16,0:16:2.39:33,2,0	0/0:11,0:11:17.98:0,18,228
chr10	89339982	.	T	TTTTA	661.94	PASS	AC=4;AF=0.125;AN=32;BaseQRankSum=-4.486;DP=177;FS=0.000;HRun=0;HaplotypeScore=36.7139;InbreedingCoeff=0.4944;MQ=64.59;MQ0=3;MQRankSum=1.878;QD=25.46;ReadPosRankSum=0.107;VQSLOD=3.0924;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:9:6.01:0,6,56	./.	./.	./.	0/0:7,0:7:6:0,6,71	0/0:10,0:10:18.06:0,18,280	./.	0/0:21,0:20:21.02:0,21,265	./.	./.	./.	0/0:4,0:4:6.02:0,6,94	0/0:4,0:4:2.99:0,3,24	0/0:1,0:1:3.01:0,3,47	1/1:1,3:4:6.02:142,6,0	./.	1/1:10,10:20:27.09:620,27,0	0/0:10,0:10:21.07:0,21,327	./.	./.	0/0:2,0:5:6.01:0,6,56	./.	0/0:6,0:6:6.02:0,6,94	0/0:2,0:2:6.02:0,6,94	0/0:4,0:4:12.02:0,12,165	./.	0/0:3,0:3:3.01:0,3,47	0/0:21,0:21:27.08:0,27,402
chr10	89341175	.	AACACAC	A	725.60	PASS	AB=0.842;AC=25;AF=0.500;AN=50;BaseQRankSum=4.125;DP=493;FS=4.889;HRun=0;HaplotypeScore=112.2966;InbreedingCoeff=0.5378;MQ=66.29;MQ0=16;MQRankSum=-0.377;QD=2.97;ReadPosRankSum=0.783;VQSLOD=1.9632;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:32:6.02:79,6,0	0/0:3,0:3:5.99:0,6,59	./.	./.	1/1:8,2:9:5.76:33,6,0	0/0:5,0:14:12.02:0,12,250	0/0:19,0:23:26.99:0,27,373	0/0:13,0:13:2.98:0,3,21	1/1:6,3:8:5.57:120,6,0	0/1:13,0:15:38.75:39,0,137	0/0:6,2:8:0.19:0,0,20	1/1:12,3:16:8.77:159,9,0	0/0:9,0:9:12.01:0,12,242	1/1:8,0:7:8.67:74,9,0	1/1:9,0:11:5.67:45,6,0	0/0:9,0:11:8.05:0,8,158	1/1:27,0:34:4.43:9,4,0	1/1:18,9:27:2.03:144,2,0	./.	1/1:3,0:8:3.01:42,3,0	1/1:50,0:49:0.47:1,0,0	0/0:9,3:11:2.99:0,3,24	0/0:7,0:8:9.03:0,9,212	0/0:20,0:33:24.07:0,24,591	1/1:5,0:4:3.01:60,3,0	0/0:17,0:17:12.04:0,12,267	1/1:8,0:11:6.02:84,6,0	0/0:6,0:6:12.03:0,12,283
chr10	89342020	.	TA	T	2353.04	PASS	AB=0.941;AC=15;AF=0.268;AN=56;BaseQRankSum=4.357;DP=559;FS=7.084;HRun=11;HaplotypeScore=70.3206;InbreedingCoeff=0.9074;MQ=71.15;MQ0=0;MQRankSum=0.297;QD=14.71;ReadPosRankSum=1.906;VQSLOD=4.1835;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.17:0,78,812	0/0:7,0:7:15.04:0,15,160	0/1:15,1:15:3.57:4,0,158	0/0:9,1:8:6.05:0,6,98	1/1:4,25:31:69.97:554,70,0	0/0:18,1:19:29.43:0,29,505	0/0:18,1:20:35.34:0,35,565	0/0:10,0:33:65.93:0,66,356	1/1:7,13:20:35.93:296,36,0	0/0:15,0:15:24.95:0,25,399	0/0:18,0:18:42.11:0,42,447	1/1:6,19:25:24.94:411,25,0	0/0:12,0:12:36.09:0,36,378	1/1:3,14:17:35.93:296,36,0	0/0:24,0:25:65.93:0,66,664	0/0:21,2:23:10.85:0,11,518	0/0:33,0:33:78.11:0,78,800	1/1:1,19:20:50.94:419,51,0	0/0:6,0:15:34.77:0,35,211	0/0:6,0:18:39.89:0,40,215	0/0:20,1:21:23.48:0,23,455	1/1:2,14:17:34.98:277,35,0	0/0:15,0:15:42.09:0,42,439	0/0:20,0:20:25.87:0,26,458	1/1:1,13:14:35.96:296,36,0	0/0:20,0:20:39.10:0,39,416	0/0:12,0:29:80.73:0,81,467	0/0:15,0:15:39.05:0,39,402
chr10	89342071	.	TAA	T	3469.98	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.749;DP=601;FS=0.934;HRun=3;HaplotypeScore=79.3174;InbreedingCoeff=0.9997;MQ=85.49;MQ0=0;MQRankSum=-2.287;QD=42.32;ReadPosRankSum=-1.836;VQSLOD=2.8771;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.31:0,90,1739	0/0:16,0:16:48.15:0,48,896	0/0:17,0:17:51.17:0,51,971	0/0:24,0:24:66.19:0,66,1196	0/0:38,0:38:99:0,108,2074	0/0:25,0:25:72.25:0,72,1374	0/0:27,0:27:81.26:0,81,1509	1/1:0,30:30:90.29:1354,90,0	0/0:23,0:23:66.23:0,66,1275	0/0:21,0:21:63.20:0,63,1130	0/0:15,0:15:45.14:0,45,832	0/0:19,0:19:54.19:0,54,1042	0/0:17,0:17:48.15:0,48,888	0/0:17,0:17:45.15:0,45,863	0/0:24,0:24:72.23:0,72,1358	0/0:17,0:17:51.17:0,51,981	0/0:32,0:32:96.33:0,96,1846	0/0:13,0:13:36.12:0,36,694	1/1:2,9:11:33.09:464,33,0	1/1:0,11:11:30.10:459,30,0	0/0:21,0:21:60.21:0,60,1152	0/0:22,0:22:63.22:0,63,1203	0/0:25,0:25:75.26:0,75,1435	0/0:19,0:19:57.14:0,57,1031	0/0:21,0:21:60.21:0,60,1159	0/0:21,0:21:60.20:0,60,1125	1/1:1,29:30:78.26:1193,78,0	0/0:15,0:15:45.15:0,45,869
chr10	89342406	.	CCT	C	2930.40	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.586;DP=760;FS=5.617;HRun=0;HaplotypeScore=112.9234;InbreedingCoeff=1.0000;MQ=69.53;MQ0=4;MQRankSum=1.437;QD=32.56;ReadPosRankSum=-0.741;VQSLOD=5.7122;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1827	0/0:15,0:15:39.13:0,39,635	0/0:31,0:24:56.90:0,57,819	0/0:28,0:24:42.60:0,43,839	0/0:36,0:36:99:0,108,1847	0/0:23,0:23:63.21:0,63,1117	0/0:29,0:29:80.60:0,81,1350	1/1:3,21:24:54.07:707,54,0	0/0:33,0:33:93.30:0,93,1634	0/0:28,0:28:78.23:0,78,1266	0/0:27,0:27:81.25:0,81,1398	0/0:26,0:26:74.71:0,75,1238	0/0:30,0:30:90.28:0,90,1577	0/0:24,0:24:69.22:0,69,1193	0/0:27,0:27:81.25:0,81,1382	0/0:39,0:39:99:0,111,1905	0/0:21,0:21:63.10:0,63,1026	0/0:26,0:26:78.22:0,78,1288	1/1:0,18:18:54.17:759,54,0	1/1:0,22:20:57.10:787,57,0	0/0:42,0:42:99:0,126,2169	0/0:29,0:29:84.21:0,84,1379	0/0:25,0:25:69.24:0,69,1236	0/0:29,0:29:77.99:0,78,1326	0/0:24,0:24:72.22:0,72,1269	0/0:24,0:24:72.15:0,72,1095	1/1:1,25:26:56.80:838,57,0	0/0:18,0:18:54.19:0,54,997
chr10	89342570	.	G	GCC	2349.59	PASS	AB=0.889;AC=25;AF=0.446;AN=56;BaseQRankSum=9.101;DP=570;FS=5.564;HRun=10;HaplotypeScore=94.3188;InbreedingCoeff=0.7084;MQ=75.73;MQ0=1;MQRankSum=-1.168;QD=8.80;ReadPosRankSum=-2.353;VQSLOD=0.8296;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:37:70.94:0,71,637	0/0:12,0:11:9.92:0,10,151	0/1:21,0:21:11.79:12,0,240	0/1:17,0:15:54.16:54,0,109	1/1:6,6:12:4.85:53,5,0	0/0:25,0:28:65.29:0,65,685	0/0:24,0:24:54.02:0,54,530	1/1:6,1:14:13.46:91,13,0	1/1:7,22:29:10.97:527,11,0	0/0:15,0:16:9.21:0,9,286	0/0:8,0:8:18.04:0,18,183	1/1:6,16:23:28.83:405,29,0	0/0:19,0:20:56.86:0,57,560	1/1:10,22:35:23.52:287,24,0	0/0:37,0:37:93.11:0,93,936	0/0:28,0:30:55.91:0,56,662	0/0:30,0:31:42.50:0,43,591	1/1:9,8:18:17.02:217,17,0	1/1:12,6:18:16.06:237,16,0	1/1:7,7:17:19.53:197,20,0	0/1:13,0:21:24.26:121,0,24	1/1:5,7:12:12.99:180,13,0	0/0:14,0:14:25.61:0,26,238	0/0:26,0:27:51.27:0,51,571	1/1:3,8:13:7.88:62,8,0	0/0:16,0:17:41.80:0,42,407	1/1:5,9:14:11.91:119,12,0	0/0:2,0:2:6.01:0,6,61
chr10	89343329	.	C	CT	3101.62	PASS	AB=0.795;AC=24;AF=0.429;AN=56;BaseQRankSum=2.715;DP=574;FS=0.797;HRun=12;HaplotypeScore=73.4884;InbreedingCoeff=0.6605;MQ=74.12;MQ0=4;MQRankSum=0.056;QD=10.70;ReadPosRankSum=-0.704;VQSLOD=3.0239;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:29:68.67:0,69,475	0/0:9,0:10:22.90:0,23,157	0/0:34,0:21:6.89:0,7,86	0/1:26,0:13:2.59:3,0,23	1/1:7,19:28:23.65:485,24,0	0/0:16,0:17:43.75:0,44,309	0/0:13,0:13:23.75:0,24,168	1/1:8,16:25:39.97:315,40,0	1/1:2,13:16:23.98:222,24,0	0/0:25,2:27:1.30:0,1,333	0/0:12,0:12:29.79:0,30,217	1/1:7,20:28:13.53:297,14,0	0/0:16,0:16:44.63:0,45,318	1/1:6,10:17:16.87:292,17,0	0/0:19,0:19:15.92:0,16,240	0/0:15,0:15:38.23:0,38,266	0/0:29,0:29:70.99:0,71,500	1/1:4,13:18:29.88:277,30,0	1/1:13,13:26:38.73:468,39,0	0/1:8,10:18:13.38:183,0,13	1/1:5,0:13:14.34:77,14,0	1/1:4,8:12:14.98:136,15,0	0/1:14,2:17:14.57:15,0,223	0/0:22,1:24:34.15:0,34,407	1/1:7,13:20:11.19:266,11,0	0/0:13,1:17:4.40:0,4,167	0/1:11,12:25:35.83:273,0,36	0/0:21,0:22:58.70:0,59,419
chr10	89344245	.	G	GTTT	4861.30	PASS	AB=0.978;AC=24;AF=0.429;AN=56;BaseQRankSum=8.459;DP=570;FS=3.027;HRun=15;HaplotypeScore=120.8537;InbreedingCoeff=0.8524;MQ=62.67;MQ0=2;MQRankSum=-11.729;QD=19.92;ReadPosRankSum=-5.076;VQSLOD=2.3777;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:41:74.31:0,74,751	0/0:6,0:6:5.66:0,6,59	0/0:26,0:14:14.74:0,15,135	0/0:19,0:11:5.72:0,6,53	1/1:20,0:26:48.68:642,49,0	0/0:27,0:28:53.57:0,54,515	0/0:23,0:27:16.58:0,17,303	1/1:15,1:19:19.25:226,19,0	1/1:9,0:12:20.98:273,21,0	0/0:13,0:16:15.72:0,16,173	0/0:16,0:18:27.72:0,28,244	1/1:9,0:11:26.70:302,27,0	0/1:17,0:17:6.71:7,0,195	1/1:18,1:19:35.88:427,36,0	0/0:17,0:17:35.71:0,36,328	0/1:20,0:21:2.18:2,0,275	0/0:27,0:30:56.65:0,57,557	1/1:11,0:14:24.13:248,24,0	1/1:15,5:23:17.58:605,18,0	1/1:14,9:28:52.38:770,52,0	0/0:12,0:13:19.60:0,20,183	1/1:11,0:12:27.01:344,27,0	0/0:12,0:15:20.51:0,21,218	0/0:27,0:27:39.56:0,40,512	1/1:12,0:13:25.26:310,25,0	0/0:19,0:21:44.61:0,45,437	1/1:14,6:24:55.64:707,56,0	0/0:20,0:21:36.89:0,37,366
chr10	89344274	.	CT	C	4278.39	PASS	AC=24;AF=0.444;AN=54;BaseQRankSum=6.232;DP=391;FS=6.366;HRun=8;HaplotypeScore=48.1998;InbreedingCoeff=0.9073;MQ=50.82;MQ0=3;MQRankSum=-8.431;QD=29.10;ReadPosRankSum=-0.422;VQSLOD=4.7837;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:78.27:0,78,1221	0/0:6,0:5:12.04:0,12,188	./.	0/0:5,0:2:2.50:0,2,9	1/1:1,17:17:42.13:558,42,0	0/0:19,0:19:48.16:0,48,752	0/0:16,0:16:39.06:0,39,548	1/1:0,13:13:39.13:517,39,0	1/1:0,9:9:18.06:250,18,0	0/0:14,0:14:39.13:0,39,622	0/0:16,0:16:39.12:0,39,584	1/1:0,17:17:27.09:374,27,0	0/0:8,0:8:12.04:0,12,187	1/1:0,14:14:30.10:409,30,0	0/0:17,0:17:48.15:0,48,721	0/0:19,1:18:0.27:0,0,522	0/0:24,0:24:54.18:0,54,824	1/1:0,7:7:9.03:124,9,0	1/1:0,6:5:15.05:201,15,0	1/1:0,13:13:30.10:409,30,0	1/1:0,14:14:30.10:413,30,0	1/1:0,13:13:33.11:440,33,0	0/0:15,0:15:33.11:0,33,510	0/0:22,0:22:63.14:0,63,915	1/1:0,9:8:15.05:208,15,0	0/0:27,0:27:81.26:0,81,1234	1/1:1,13:14:27.09:375,27,0	0/0:3,0:3:9.03:0,9,142
chr10	89344835	.	TACAC	T	514.18	PASS	AB=0.894;AC=17;AF=0.340;AN=50;BaseQRankSum=3.364;DP=521;FS=0.977;HRun=0;HaplotypeScore=86.3508;InbreedingCoeff=0.3671;MQ=67.06;MQ0=17;MQRankSum=0.279;QD=3.14;ReadPosRankSum=0.158;VQSLOD=1.7883;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:26.55:0,27,425	0/0:4,0:4:3.01:0,3,66	./.	./.	1/1:4,4:8:6.02:93,6,0	0/0:9,0:11:14.79:0,15,273	0/1:21,0:22:28.16:28,0,251	0/0:29,0:29:18.02:0,18,215	1/1:7,3:11:11.99:141,12,0	0/0:13,0:12:9.03:0,9,196	0/1:16,0:16:7.07:7,0,222	1/1:11,2:13:3.48:47,3,0	0/1:10,0:10:32.57:33,0,71	1/1:9,5:16:11.93:156,12,0	0/1:17,0:21:9.69:10,0,473	0/0:16,0:16:11.43:0,11,170	0/0:21,0:20:9.03:0,9,160	0/1:12,6:18:13.97:41,0,14	0/0:19,0:18:9.03:0,9,154	./.	0/0:42,0:41:38.55:0,39,578	1/1:9,3:12:8.20:74,8,0	0/0:11,0:11:3.01:0,3,48	0/0:30,0:32:53.64:0,54,1007	1/1:8,5:14:3.01:47,3,0	0/0:22,0:22:12.04:0,12,201	0/0:12,0:12:10.28:0,10,121	0/0:14,0:14:13.27:0,13,240
chr10	89345726	.	TC	T	8942.25	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=18.959;DP=688;FS=1.299;HRun=3;HaplotypeScore=109.9220;InbreedingCoeff=0.9944;MQ=78.66;MQ0=0;MQRankSum=-5.280;QD=29.42;ReadPosRankSum=-0.105;VQSLOD=4.0120;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,1876	0/0:9,0:9:27.05:0,27,364	0/0:18,0:18:51.17:0,51,703	0/0:19,0:19:54.09:0,54,660	1/1:2,11:13:15.52:186,16,0	0/0:23,0:23:69.23:0,69,993	0/0:33,0:33:96.32:0,96,1382	1/1:1,22:23:66.11:771,66,0	1/1:1,27:28:75.24:929,75,0	0/0:26,0:26:75.25:0,75,1075	0/0:12,0:12:36.12:0,36,517	1/1:0,39:39:99:1372,111,0	0/0:28,0:28:84.27:0,84,1186	1/1:2,36:38:90.28:1115,90,0	0/0:31,0:31:90.26:0,90,1242	0/0:22,0:22:66.21:0,66,932	0/0:37,0:37:99:0,111,1559	1/1:0,29:29:81.25:1004,81,0	1/1:0,17:17:45.14:557,45,0	1/1:2,9:11:18.06:223,18,0	1/1:2,60:62:99:1599,129,0	1/1:1,8:9:18.06:221,18,0	0/0:13,0:13:36.11:0,36,501	0/0:32,0:32:93.31:0,93,1339	1/1:0,11:11:18.06:223,18,0	0/0:23,0:23:69.23:0,69,992	1/1:1,23:24:60.19:743,60,0	0/0:12,0:12:36.12:0,36,518
chr10	89347259	.	G	GT	204.88	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=5.391;DP=554;FS=0.910;HRun=9;HaplotypeScore=95.7276;InbreedingCoeff=0.4459;MQ=66.51;MQ0=1;MQRankSum=-3.256;QD=3.41;ReadPosRankSum=-3.526;VQSLOD=-0.7064;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,123,1042	0/0:7,0:7:20.67:0,21,167	0/1:27,0:13:0.61:1,0,100	0/1:20,0:10:10.60:11,0,59	0/0:11,0:11:14.19:0,14,116	0/0:21,0:21:56.97:0,57,491	0/0:24,0:24:56.98:0,57,494	0/0:31,0:30:65.18:0,65,562	0/0:10,0:10:14.28:0,14,82	0/0:23,0:23:62.72:0,63,528	0/0:14,0:14:32.30:0,32,256	0/0:10,0:11:11.03:0,11,50	0/0:21,0:21:38.98:0,39,339	0/0:15,0:15:16.67:0,17,115	0/0:25,0:25:59.73:0,60,508	0/0:15,0:15:41.95:0,42,356	0/0:43,0:43:99:0,114,975	0/0:20,0:19:26.31:0,26,179	0/0:17,0:17:8.79:0,9,316	0/0:15,0:15:38.76:0,39,293	1/1:5,7:12:29.56:296,30,0	0/0:11,0:11:2.66:0,3,145	0/0:14,0:14:32.87:0,33,273	0/0:31,0:31:83.97:0,84,728	0/0:17,0:17:22.51:0,23,273	0/0:20,0:20:56.97:0,57,490	0/0:18,0:18:41.77:0,42,315	0/0:15,0:15:41.87:0,42,354
chr10	89347269	.	G	GTTTT	3735.43	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=10.808;DP=542;FS=2.537;HRun=11;HaplotypeScore=102.2755;InbreedingCoeff=0.8674;MQ=66.06;MQ0=2;MQRankSum=-8.272;QD=17.29;ReadPosRankSum=-4.997;VQSLOD=0.5152;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:45:86.08:0,86,1235	0/0:6,0:7:16.23:0,16,192	0/1:31,0:13:6.01:6,0,92	0/0:21,0:11:0.86:0,1,123	1/1:4,9:13:5.51:78,6,0	0/0:21,0:21:44.96:0,45,559	0/0:20,0:22:39.34:0,39,492	1/1:23,0:22:38.84:451,39,0	1/1:2,8:11:12.04:265,12,0	0/0:21,0:23:30.44:0,30,404	0/0:10,0:11:24.23:0,24,289	1/1:1,10:13:12.04:213,12,0	0/0:15,0:15:36.01:0,36,486	1/1:3,17:20:9.03:208,9,0	0/0:22,0:22:32.90:0,33,539	0/0:16,0:16:44.99:0,45,587	0/0:40,0:40:55.60:0,56,1141	1/1:4,16:20:18.06:384,18,0	1/1:14,0:14:38.40:434,38,0	1/1:15,0:15:27.06:417,27,0	1/1:10,0:10:11.88:106,12,0	1/1:10,1:12:28.21:284,28,0	0/0:16,0:17:34.99:0,35,372	0/0:29,0:30:77.20:0,77,959	1/1:14,0:17:42.86:394,43,0	0/0:21,0:22:16.42:0,16,427	1/1:16,0:16:30.10:496,30,0	0/0:13,0:14:34.34:0,34,453
chr10	89347272	.	T	TTTTTG	4508.52	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=7.924;DP=549;FS=2.643;HRun=0;HaplotypeScore=111.6966;InbreedingCoeff=0.5943;MQ=64.71;MQ0=2;MQRankSum=-8.301;QD=23.73;ReadPosRankSum=-1.003;VQSLOD=4.2722;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,2088	0/0:7,0:7:21.01:0,21,343	0/0:32,0:12:33.44:0,33,280	0/0:24,0:12:18.57:0,19,203	0/1:13,0:13:14:14,0,68	0/0:21,0:21:54.15:0,54,954	0/0:23,0:23:48.06:0,48,818	1/1:3,19:23:54.03:995,54,0	1/1:11,0:11:12.02:146,12,0	0/0:22,0:22:51.09:0,51,800	0/0:12,0:12:36.06:0,36,564	0/1:15,0:15:12.11:67,0,12	0/0:15,0:15:45.12:0,45,783	0/1:20,0:20:36.31:71,0,36	0/0:22,0:22:57.08:0,57,994	0/0:16,0:16:48.16:0,48,903	0/0:42,0:41:99:0,117,2018	1/1:21,0:20:2.96:155,3,0	1/1:3,14:17:48.09:969,48,0	1/1:2,12:14:27.07:721,27,0	1/1:7,2:11:17.72:240,18,0	0/1:12,0:12:15.55:18,0,16	0/0:16,0:16:45.09:0,45,699	0/0:29,0:29:84.26:0,84,1532	0/1:16,0:16:5.39:138,0,5	0/0:21,0:21:51.98:0,52,830	1/1:3,12:16:36.12:974,36,0	0/0:13,0:13:39.11:0,39,715
chr10	89348848	.	GTGA	G	6546.07	PASS	AB=0.830;AC=25;AF=0.446;AN=56;BaseQRankSum=13.852;DP=735;FS=9.377;HRun=0;HaplotypeScore=107.2234;InbreedingCoeff=0.7981;MQ=61.63;MQ0=11;MQRankSum=0.935;QD=16.78;ReadPosRankSum=1.773;VQSLOD=3.8115;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,114,1998	0/0:10,0:10:18.06:0,18,362	0/1:42,0:17:0.09:0,0,87	0/0:27,0:18:21.50:0,21,341	1/1:6,10:18:33.01:413,33,0	0/0:13,0:13:36.11:0,36,675	0/0:24,0:24:57.12:0,57,957	1/1:18,10:28:33.05:379,33,0	0/1:6,19:25:15.15:547,0,15	0/0:21,1:21:11.88:0,12,938	0/0:17,0:17:26.16:0,26,597	1/1:5,28:33:57.17:804,57,0	0/1:22,2:24:33.51:34,0,673	1/1:15,13:30:36.76:528,37,0	0/0:32,0:32:44.40:0,44,1208	0/0:21,1:22:5.79:0,6,747	0/0:37,0:37:84.23:0,84,1635	1/1:8,18:27:17.72:455,18,0	1/1:14,10:23:27.04:347,27,0	1/1:5,14:19:42.02:520,42,0	1/1:17,32:50:60.20:846,60,0	1/1:6,19:25:39.13:550,39,0	0/0:16,0:16:33.02:0,33,542	0/0:36,0:36:39.42:0,39,1379	1/1:4,21:25:45.15:635,45,0	0/0:24,0:24:48.13:0,48,875	1/1:12,8:20:36.10:488,36,0	0/0:20,0:20:36.21:0,36,961
chr10	89348929	.	TTTCA	T	2724.08	PASS	AB=0.938;AC=11;AF=0.196;AN=56;BaseQRankSum=2.653;DP=665;FS=1.050;HRun=0;HaplotypeScore=128.5767;InbreedingCoeff=0.8699;MQ=71.64;MQ0=3;MQRankSum=2.576;QD=18.92;ReadPosRankSum=-0.068;VQSLOD=3.5114;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,24:34:63.21:1026,63,0	0/0:4,0:12:19.33:0,19,255	0/0:22,0:19:12.04:0,12,245	0/0:21,0:20:18.06:0,18,395	0/0:18,0:18:33.11:0,33,789	0/0:16,0:16:33.11:0,33,783	0/0:26,0:26:57.20:0,57,1343	1/1:14,10:24:30.07:420,30,0	0/0:27,1:28:15.45:0,15,1345	0/0:10,0:10:21.07:0,21,499	0/0:18,0:18:39.12:0,39,858	0/0:31,0:31:66.20:0,66,1457	0/0:29,0:29:63.22:0,63,1442	0/0:29,1:30:24.48:0,24,1555	0/0:10,0:36:54.18:0,54,911	0/0:26,0:26:57.17:0,57,1275	0/0:16,0:27:28.91:0,29,479	0/0:22,0:22:42.14:0,42,1005	1/1:11,5:16:16.28:284,16,0	1/1:11,9:20:24.08:382,24,0	0/0:39,0:39:75.26:0,75,1766	0/0:20,0:20:30.10:0,30,714	0/0:14,0:14:24.08:0,24,574	0/0:23,0:23:54.19:0,54,1283	0/0:21,0:21:48.16:0,48,1108	0/0:32,0:32:72.25:0,72,1701	1/1:13,22:34:47.91:764,48,0	0/1:14,1:13:26.43:26,0,337
chr10	89349619	.	GA	G	11249.74	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=15.370;DP=683;FS=0.284;HRun=1;HaplotypeScore=79.0187;InbreedingCoeff=0.9993;MQ=80.67;MQ0=0;MQRankSum=-1.632;QD=38.13;ReadPosRankSum=3.108;VQSLOD=5.4529;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,2015	0/0:8,0:8:21.07:0,21,335	0/0:16,0:16:37.17:0,37,477	0/0:19,0:19:46.33:0,46,638	1/1:0,27:27:78.17:1059,78,0	0/0:28,0:28:81.19:0,81,1241	0/0:23,0:23:69.22:0,69,1077	1/1:0,19:19:57.10:770,57,0	1/1:0,27:27:69.23:964,69,0	0/0:34,0:34:99:0,102,1584	0/0:17,0:17:51.17:0,51,803	1/1:0,27:27:75.10:1031,75,0	0/0:20,0:20:60.20:0,60,941	1/1:0,24:24:66.22:918,66,0	0/0:32,0:32:96.28:0,96,1462	0/0:29,1:30:48.35:0,48,1324	0/0:35,0:35:99:0,105,1619	1/1:0,21:21:60.20:839,60,0	1/1:0,21:21:63.21:880,63,0	1/1:0,22:22:63.21:871,63,0	1/1:0,38:38:99:1468,105,0	1/1:0,24:24:60.20:838,60,0	0/0:16,0:16:42.14:0,42,662	0/0:11,0:11:33.11:0,33,527	1/1:0,13:13:30.06:397,30,0	0/0:28,0:28:81.27:0,81,1265	1/1:0,32:32:87.29:1215,87,0	0/0:26,0:26:78.13:0,78,1115
chr10	89350013	.	T	TAAAAAAAAAAAAAAAA	16211.26	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=4.275;DP=504;FS=9.453;HRun=9;HaplotypeScore=167.8500;InbreedingCoeff=0.9209;MQ=51.21;MQ0=42;MQRankSum=-11.260;QD=124.70;ReadPosRankSum=-2.696;VQSLOD=1.1029;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:35.54:0,36,1327	0/0:5,0:4:5.73:0,6,236	0/0:69,0:14:26.73:0,27,649	0/0:72,0:16:13.93:0,14,457	1/1:12,1:14:42.14:2124,42,0	0/0:24,0:23:35.38:0,35,1397	0/0:19,0:19:26.38:0,26,1005	1/1:21,0:19:42.14:2573,42,0	1/1:10,0:8:21.07:1045,21,0	0/0:10,0:10:17.88:0,18,654	0/0:13,0:13:20.79:0,21,751	1/1:12,2:14:39.13:2413,39,0	0/0:16,0:13:14.55:0,15,569	1/1:5,0:5:12.04:690,12,0	0/0:15,0:11:11.70:0,12,304	0/0:7,0:6:5.72:0,6,144	0/0:21,0:20:29.66:0,30,1119	1/1:11,0:9:27.05:1468,27,0	1/1:14,0:11:24.08:1365,24,0	1/1:12,0:11:30.10:1658,30,0	1/1:3,0:2:6.02:283,6,0	1/1:9,0:8:18.06:817,18,0	0/0:12,0:11:23.74:0,24,680	0/0:12,0:11:20.93:0,21,833	1/1:4,0:4:9.03:580,9,0	0/0:15,0:15:11.24:0,11,475	1/1:5,2:7:18.06:1197,18,0	0/0:32,0:24:28.73:0,29,900
chr10	89350940	.	TA	T	1188.36	PASS	AB=0.964;AC=19;AF=0.339;AN=56;BaseQRankSum=17.673;DP=590;FS=14.486;HRun=2;HaplotypeScore=105.9694;InbreedingCoeff=0.5177;MQ=86.80;MQ0=0;MQRankSum=-6.690;QD=5.19;ReadPosRankSum=1.390;VQSLOD=-0.6170;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1485	0/0:12,0:12:33.10:0,33,475	0/0:20,1:20:26.44:0,26,593	0/0:29,0:29:57.48:0,57,695	1/1:13,2:15:21.42:87,21,0	0/0:21,0:21:60.16:0,60,830	0/0:31,0:31:93.22:0,93,1244	0/1:23,0:23:52.77:53,0,68	1/1:28,1:29:0.07:210,0,0	0/0:27,0:27:78.24:0,78,1128	0/0:17,0:17:48.11:0,48,655	1/1:24,3:27:39.48:291,39,0	0/0:21,0:21:62.91:0,63,827	1/1:20,0:20:44.48:210,44,0	0/0:21,0:21:63.21:0,63,940	0/0:19,0:19:57.14:0,57,787	0/0:31,0:31:87.74:0,88,1255	0/1:19,0:19:60.51:71,0,61	0/1:13,0:12:13.50:14,0,77	0/1:7,2:9:7.03:51,0,7	0/1:25,0:24:25.68:26,0,166	1/1:18,0:17:0.46:94,0,0	0/0:7,0:7:21.07:0,21,314	0/0:34,0:34:99:0,99,1344	1/1:14,3:17:38.58:195,39,0	0/0:16,0:16:48.13:0,48,636	1/1:14,0:14:8.64:73,9,0	0/0:16,0:16:48.14:0,48,688
chr10	89350942	.	AC	A	5531.17	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=15.479;DP=591;FS=8.672;HRun=7;HaplotypeScore=94.8860;InbreedingCoeff=0.9962;MQ=86.20;MQ0=0;MQRankSum=-8.726;QD=24.15;ReadPosRankSum=-2.697;VQSLOD=3.3928;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1320	0/0:12,0:12:30.10:0,30,377	0/0:22,0:21:14.59:0,15,473	0/0:27,0:27:42.85:0,43,491	1/1:3,12:15:38.84:358,39,0	0/0:21,0:21:54.09:0,54,658	0/0:31,0:31:75.24:0,75,943	1/1:4,19:23:57.12:581,57,0	1/1:6,23:29:75.11:746,75,0	0/0:28,0:28:78.20:0,78,952	0/0:17,0:17:42.13:0,42,528	1/1:6,21:27:72.15:730,72,0	0/0:20,0:20:54.14:0,54,652	1/1:3,19:22:60.09:601,60,0	0/0:22,0:22:66.19:0,66,816	0/0:20,0:20:51.15:0,51,630	0/0:30,0:30:84.74:0,85,1052	1/1:7,14:21:47.99:458,48,0	1/1:4,8:12:23.08:220,23,0	1/1:4,5:9:21.01:202,21,0	1/1:7,16:22:36:345,36,0	1/1:3,14:16:42.10:428,42,0	0/0:8,0:8:24.07:0,24,290	0/0:32,0:32:84.18:0,84,1026	1/1:4,13:17:51.10:513,51,0	0/0:18,0:18:42.13:0,42,517	1/1:3,10:13:36.02:349,36,0	0/0:16,0:16:45.10:0,45,545
chr10	89350978	.	AG	A	9863.36	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=16.802;DP=643;FS=8.663;HRun=1;HaplotypeScore=94.2734;InbreedingCoeff=0.9997;MQ=84.23;MQ0=0;MQRankSum=-10.216;QD=37.36;ReadPosRankSum=-2.244;VQSLOD=3.6740;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,2322	0/0:11,0:11:33.11:0,33,527	0/0:24,0:24:63.21:0,63,971	0/0:21,0:21:49.69:0,50,714	1/1:0,17:16:41.79:560,42,0	0/0:27,0:27:78.27:0,78,1246	0/0:32,0:32:96.31:0,96,1509	1/1:2,30:32:96.25:1267,96,0	1/1:0,28:28:81.27:1111,81,0	0/0:28,0:28:84.27:0,84,1292	0/0:12,0:12:33.11:0,33,525	1/1:1,27:28:84.28:1170,84,0	0/0:23,0:23:69.24:0,69,1102	1/1:1,20:21:54.18:753,54,0	0/0:26,0:26:75.16:0,75,1123	0/0:18,0:18:54.18:0,54,863	0/0:39,0:39:99:0,117,1867	1/1:1,21:22:66.22:914,66,0	1/1:0,18:18:51.07:651,51,0	1/1:0,12:12:36:450,36,0	1/1:0,32:32:69.23:963,69,0	1/1:0,22:22:54.09:728,54,0	0/0:9,0:9:27.09:0,27,431	0/0:30,0:30:90.26:0,90,1402	1/1:1,12:13:36.12:502,36,0	0/0:17,0:17:51.16:0,51,794	1/1:0,19:19:57.19:795,57,0	0/0:12,0:12:36.08:0,36,525
chr10	89351441	.	CGAGAGAGA	C	533.41	PASS	AC=8;AF=0.174;AN=46;BaseQRankSum=2.989;DP=517;FS=2.938;HRun=0;HaplotypeScore=131.5243;InbreedingCoeff=0.6295;MQ=66.20;MQ0=11;MQRankSum=-3.707;QD=6.50;ReadPosRankSum=0.700;VQSLOD=2.4222;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:30.57:0,31,895	0/0:7,0:7:6.02:0,6,146	./.	./.	0/0:15,0:14:0.47:0,0,1	0/0:15,0:14:15.05:0,15,325	0/0:27,0:30:24.06:0,24,655	0/0:13,0:13:4.57:0,5,60	1/1:20,5:26:9.03:204,9,0	0/0:21,0:20:16.86:0,17,335	./.	1/1:10,5:16:12.04:252,12,0	0/0:14,0:14:18.01:0,18,427	1/1:15,3:19:6.49:149,6,0	0/0:21,0:21:12.04:0,12,375	0/0:14,0:16:15.01:0,15,327	0/0:13,0:18:21.07:0,21,495	./.	0/0:17,0:16:8.78:0,9,58	0/0:20,0:20:2.99:0,3,24	./.	0/0:18,0:20:15.02:0,15,255	0/0:9,0:9:2.99:0,3,24	0/0:17,0:19:24.07:0,24,552	1/1:21,0:21:4.57:57,5,0	0/0:18,0:16:12.04:0,12,293	0/0:16,0:18:3.01:0,3,31	0/0:9,0:9:6.02:0,6,133
chr10	89353638	.	TTC	T	1351.33	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=2.325;DP=532;FS=11.894;HRun=0;HaplotypeScore=80.2113;InbreedingCoeff=0.7935;MQ=70.99;MQ0=3;MQRankSum=-1.134;QD=5.47;ReadPosRankSum=-1.781;VQSLOD=1.6147;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:32:24.48:0,24,325	0/1:3,0:3:1.86:2,0,55	0/0:39,0:18:29.54:0,30,228	0/1:27,0:11:3.30:3,0,87	1/1:19,0:18:21.10:181,21,0	0/0:22,0:21:32.87:0,33,289	0/0:18,1:19:16.64:0,17,318	1/1:21,0:20:14.96:139,15,0	0/1:13,0:13:15.88:37,0,16	0/0:20,0:19:39.02:0,39,373	0/0:12,0:12:12.01:0,12,134	1/1:17,1:18:27.47:224,27,0	0/0:9,0:9:10.72:0,11,133	1/1:23,0:23:19.44:144,19,0	0/0:14,0:14:19.95:0,20,151	0/0:15,0:15:23.49:0,23,187	0/0:29,2:31:10.62:0,11,334	1/1:23,1:24:16.55:145,17,0	1/1:30,0:30:16.53:174,17,0	1/1:9,0:9:9.23:104,9,0	1/1:13,0:12:17.52:101,18,0	1/1:9,0:9:14.82:98,15,0	0/0:12,0:12:26.75:0,27,203	0/0:19,0:19:41.04:0,41,443	1/1:18,0:18:14.10:102,14,0	0/0:30,0:30:42.89:0,43,475	1/1:20,0:18:17.25:112,17,0	0/0:10,0:10:19.84:0,20,197
chr10	89353639	.	TC	T	2915.24	PASS	AB=0.917;AC=27;AF=0.482;AN=56;BaseQRankSum=2.531;DP=505;FS=93.140;HRun=1;HaplotypeScore=65.0844;InbreedingCoeff=0.6988;MQ=76.38;MQ0=3;MQRankSum=-1.893;QD=12.10;ReadPosRankSum=-4.645;VQSLOD=-0.0244;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:53.21:0,53,393	0/1:2,1:3:22.91:23,0,42	0/0:41,0:21:40.82:0,41,305	0/0:28,0:13:7:0,7,127	1/1:19,1:20:45.98:323,46,0	0/1:22,0:21:16.94:17,0,226	0/0:19,0:19:15.54:0,16,273	1/1:22,0:21:46.46:280,46,0	1/1:13,0:13:27.45:142,27,0	0/0:18,2:19:12.80:0,13,324	0/1:9,0:9:5.84:6,0,98	1/1:19,1:20:57.80:419,58,0	0/0:7,1:8:17.11:0,17,126	1/1:20,1:21:41.75:294,42,0	0/0:9,2:11:1.32:0,1,138	0/0:13,0:13:4.14:0,4,137	0/0:27,2:29:19.34:0,19,257	1/1:22,0:22:52.15:302,52,0	1/1:25,0:25:46.65:357,47,0	1/1:8,0:8:22.64:164,23,0	1/1:11,0:10:26.76:146,27,0	1/1:0,8:9:17.75:115,18,0	0/0:12,0:12:18.99:0,19,190	0/0:17,1:18:25.63:0,26,327	1/1:18,0:18:40.39:264,40,0	0/0:25,1:25:1.57:0,2,364	1/1:17,1:17:44.99:273,45,0	0/0:10,0:10:16.90:0,17,144
chr10	89354672	.	C	CT	1612.94	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.706;DP=630;FS=14.944;HRun=2;HaplotypeScore=59.1896;InbreedingCoeff=0.9938;MQ=90.49;MQ0=0;MQRankSum=-1.444;QD=35.84;ReadPosRankSum=0.722;VQSLOD=2.4194;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,1853	1/1:0,5:5:15.05:225,15,0	0/0:23,0:22:66.19:0,66,835	0/0:28,0:28:69.83:0,70,850	0/0:25,0:25:72.21:0,72,919	0/0:11,0:11:33.11:0,33,429	0/0:27,0:27:78.24:0,78,998	0/0:26,0:26:69.21:0,69,874	0/0:25,0:25:75.24:0,75,973	0/0:22,0:22:66.20:0,66,831	0/0:15,0:15:45.15:0,45,584	0/0:29,0:29:87.27:0,87,1117	0/0:16,0:16:48.12:0,48,592	0/0:27,0:27:81.25:0,81,1037	1/1:1,21:22:54.18:809,54,0	0/0:23,0:23:69.21:0,69,870	1/1:1,17:18:48.16:719,48,0	0/0:25,0:25:75.17:0,75,937	0/0:20,0:20:57.16:0,57,700	0/0:15,0:15:42.14:0,42,544	0/0:35,0:35:99:0,99,1269	0/0:16,0:16:45.14:0,45,567	0/0:23,0:23:69.22:0,69,894	0/0:30,0:30:87.27:0,87,1115	0/0:19,0:19:57.19:0,57,740	0/0:19,0:19:54.18:0,54,701	0/0:27,0:27:78.25:0,78,1012	0/0:10,0:10:27.09:0,27,351
chr10	89355771	.	A	ACAGGGTTTCTCTTGTAG	18354.30	PASS	AB=0.596;AC=13;AF=0.232;AN=56;BaseQRankSum=-6.238;DP=644;FS=23.300;HRun=0;HaplotypeScore=252.8863;InbreedingCoeff=0.8971;MQ=64.74;MQ0=0;MQRankSum=-14.012;QD=128.35;ReadPosRankSum=3.712;VQSLOD=3.3880;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,4928	0/0:7,0:7:21.05:0,21,849	0/0:31,0:27:60.58:0,61,2884	0/0:22,0:18:45.15:0,45,1839	1/1:5,6:23:27.09:1553,27,0	0/0:28,0:28:84.25:0,84,3586	0/0:33,0:33:99:0,99,3749	0/0:30,0:30:90.24:0,90,3087	0/1:9,7:28:96.59:3755,0,97	0/0:23,0:23:66.23:0,66,3215	0/0:14,0:14:42.14:0,42,2035	1/1:2,11:23:39.13:3166,39,0	0/0:15,0:15:42.13:0,42,1724	1/1:3,11:22:42.08:3231,42,0	0/0:36,0:36:99:0,108,4697	0/0:17,0:17:51.13:0,51,2018	0/0:26,0:26:78.27:0,78,3437	1/1:3,5:16:18.06:1510,18,0	0/0:16,0:16:41.20:0,41,1537	0/0:15,0:15:42.14:0,42,2081	0/0:22,0:22:63.20:0,63,2716	1/1:5,9:19:42.14:3011,42,0	0/0:18,0:18:45.15:0,45,2245	0/0:46,0:46:99:0,135,6073	1/1:3,7:10:30.10:2128,30,0	0/0:22,0:22:63.22:0,63,3114	0/0:15,0:15:45.10:0,45,1782	0/0:24,0:24:54.22:0,54,2568
chr10	89356971	.	ACT	A	893.64	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=3.486;DP=378;FS=0.588;HRun=0;HaplotypeScore=67.2126;InbreedingCoeff=0.9174;MQ=75.07;MQ0=5;MQRankSum=-3.390;QD=13.54;ReadPosRankSum=-1.249;VQSLOD=3.1900;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:71.92:0,72,895	0/0:7,0:7:18.03:0,18,227	0/0:31,0:20:47.23:0,47,460	0/0:32,0:13:23.11:0,23,202	1/1:15,0:15:34.80:227,35,0	0/0:13,0:13:29.71:0,30,336	0/0:7,0:7:2.89:0,3,109	0/0:28,0:28:62.84:0,63,783	1/1:7,0:7:8.39:40,8,0	0/0:12,0:12:27.07:0,27,378	0/0:17,0:17:41.83:0,42,454	1/1:5,1:6:16.02:132,16,0	0/0:2,0:2:6.01:0,6,74	1/1:6,1:7:14.61:117,15,0	0/0:7,0:7:21.06:0,21,305	0/0:5,0:5:15.02:0,15,196	0/0:20,0:20:48.10:0,48,674	1/1:9,1:10:25.05:233,25,0	0/0:14,0:14:32.89:0,33,371	0/0:17,0:17:47.88:0,48,623	0/0:9,0:9:26.63:0,27,180	1/1:2,5:7:14.87:145,15,0	0/0:12,0:12:26.98:0,27,333	0/0:10,0:10:17.16:0,17,357	1/1:14,0:14:16.77:190,17,0	0/0:19,0:19:54.01:0,54,591	0/0:9,0:9:20.95:0,21,220	0/0:7,0:7:19.93:0,20,209
chr10	89356973	.	TC	T	1389.31	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=2.342;DP=394;FS=1.898;HRun=1;HaplotypeScore=69.5058;InbreedingCoeff=0.8648;MQ=73.44;MQ0=5;MQRankSum=-3.999;QD=17.81;ReadPosRankSum=-1.982;VQSLOD=3.3460;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:48.95:0,49,659	0/0:7,0:7:20.14:0,20,167	0/0:33,1:19:35.36:0,35,343	0/0:33,0:13:22.42:0,22,182	1/1:8,8:16:36.05:399,36,0	0/0:14,0:14:27.82:0,28,246	0/0:9,0:9:11.12:0,11,100	0/0:25,0:25:60.50:0,61,621	1/1:0,7:7:9.03:115,9,0	0/0:10,0:10:30.07:0,30,334	0/0:17,0:17:43.84:0,44,396	1/1:5,1:6:17.97:162,18,0	0/0:2,0:2:6.01:0,6,60	1/1:5,3:8:14.99:149,15,0	0/0:8,0:8:21:0,21,225	0/0:6,0:6:18.03:0,18,188	0/0:27,0:27:47.56:0,48,510	1/1:8,3:11:27.01:267,27,0	0/0:12,0:12:30.51:0,31,303	0/0:18,0:18:48.87:0,49,474	0/0:9,0:9:19.80:0,20,103	1/1:8,1:9:17.85:129,18,0	0/0:11,0:11:10.27:0,10,236	0/0:11,1:12:26.28:0,26,282	1/1:7,6:13:30.98:354,31,0	0/0:19,0:19:52.86:0,53,479	0/0:10,0:10:20.78:0,21,164	0/1:8,0:8:9.30:9,0,103
chr10	89356999	.	A	ATTT	3908.12	PASS	AB=0.824;AC=26;AF=0.464;AN=56;BaseQRankSum=1.819;DP=496;FS=2.259;HRun=14;HaplotypeScore=97.1256;InbreedingCoeff=0.5369;MQ=60.07;MQ0=22;MQRankSum=-4.551;QD=15.21;ReadPosRankSum=-2.234;VQSLOD=2.1431;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:27:50.17:0,50,468	0/1:6,0:13:3.61:4,0,43	0/0:44,0:12:0.43:0,0,57	0/0:41,0:13:5.92:0,6,52	1/1:8,3:15:35.75:451,36,0	0/0:19,0:20:44.78:0,45,423	0/0:14,0:13:31.59:0,32,294	1/1:16,11:29:51.02:683,51,0	1/1:6,0:8:17.83:192,18,0	0/0:14,0:15:14.05:0,14,159	0/0:15,0:15:20.70:0,21,210	1/1:5,0:9:11.77:128,12,0	0/0:3,0:3:9.01:0,9,88	0/1:9,0:8:15.78:152,0,16	0/1:6,0:14:49.04:79,0,49	0/0:10,0:10:7.40:0,7,77	0/1:20,0:32:48.62:49,0,107	0/1:14,0:12:15.68:143,0,16	1/1:12,3:19:32.95:368,33,0	1/1:11,10:24:41.41:405,41,0	1/1:4,0:5:9.03:122,9,0	1/1:9,0:8:11.06:123,11,0	0/1:12,0:11:0.16:0,0,161	0/0:18,0:18:29.69:0,30,300	1/1:9,1:13:29.87:355,30,0	0/0:13,0:15:16.25:0,16,166	1/1:14,7:22:48.09:655,48,0	0/0:11,0:12:17.50:0,18,157
chr10	89357435	.	GTACA	G	4193.31	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=12.845;DP=643;FS=0.903;HRun=0;HaplotypeScore=115.9214;InbreedingCoeff=0.9267;MQ=62.32;MQ0=0;MQRankSum=-4.256;QD=29.12;ReadPosRankSum=4.232;VQSLOD=3.4017;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:72.66:0,73,1463	0/0:13,0:13:36.12:0,36,835	0/1:15,0:13:3.93:4,0,363	0/0:9,0:9:10.84:0,11,117	1/1:8,21:29:39.09:624,39,0	0/0:20,0:20:51.11:0,51,1035	0/0:27,0:27:63.19:0,63,1382	0/0:34,0:34:72.18:0,72,1200	1/1:3,13:16:39.13:655,39,0	0/0:42,0:42:99:0,117,2532	0/0:23,0:23:63.19:0,63,1432	1/1:14,10:24:42.10:671,42,0	0/0:20,0:20:45.13:0,45,981	1/1:3,9:12:27.09:451,27,0	0/0:32,0:32:81.17:0,81,1699	0/0:20,0:20:45.11:0,45,910	0/0:19,0:19:42.13:0,42,911	1/1:7,9:16:30.10:503,30,0	0/0:17,0:17:36.07:0,36,603	0/0:30,0:30:75.23:0,75,1722	0/0:32,0:32:69.19:0,69,1526	1/1:7,7:14:24.07:379,24,0	0/0:25,0:25:51.12:0,51,1150	0/0:22,0:22:54.17:0,54,1193	1/1:0,18:18:54.18:906,54,0	0/0:33,0:33:75.21:0,75,1640	0/0:37,0:37:90.27:0,90,2104	0/0:10,0:10:27.09:0,27,670
chr10	89357483	.	C	CTTT	3632.56	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.868;DP=656;FS=1.397;HRun=9;HaplotypeScore=110.3617;InbreedingCoeff=0.9923;MQ=66.81;MQ0=4;MQRankSum=-9.476;QD=23.59;ReadPosRankSum=-2.631;VQSLOD=1.5929;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:99:0,105,1298	0/0:12,0:12:36.09:0,36,427	0/0:18,0:14:26.52:0,27,230	0/0:15,0:16:13.62:0,14,227	1/1:16,8:26:53.51:651,54,0	0/0:18,0:18:48.14:0,48,593	0/0:21,0:21:51.10:0,51,603	0/0:31,0:30:56.34:0,56,656	1/1:12,5:17:41.57:537,42,0	0/0:41,0:41:91.29:0,91,1215	0/0:25,0:25:59.88:0,60,730	1/1:6,21:28:35.99:561,36,0	0/0:21,0:21:56.64:0,57,676	1/1:3,13:17:22.32:387,22,0	0/0:27,0:27:78.17:0,78,930	0/0:19,0:19:48.12:0,48,580	0/0:22,0:22:60.10:0,60,724	1/1:7,17:24:30.02:487,30,0	0/0:26,0:27:72.05:0,72,822	0/0:32,0:32:83.89:0,84,933	0/0:18,0:18:39.09:0,39,492	1/1:3,11:15:15.52:295,16,0	0/0:17,0:18:47.98:0,48,527	0/0:25,0:25:74.63:0,75,855	1/1:16,10:25:56.62:715,57,0	0/0:29,0:29:61.68:0,62,956	0/0:29,0:29:87.18:0,87,1036	0/0:12,0:12:26.86:0,27,341
chr10	89357999	.	CCA	C	4614.34	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.459;DP=750;FS=2.735;HRun=0;HaplotypeScore=114.3507;InbreedingCoeff=0.9979;MQ=66.85;MQ0=2;MQRankSum=-0.884;QD=29.77;ReadPosRankSum=2.813;VQSLOD=6.5039;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1939	0/0:11,0:11:33.11:0,33,586	0/0:27,0:23:56.72:0,57,798	0/0:41,0:30:23.95:0,24,688	1/1:2,19:21:30.07:391,30,0	0/0:20,0:20:57.20:0,57,1011	0/0:16,0:16:45.15:0,45,790	0/0:39,0:39:99:0,108,1907	1/1:2,31:33:75.25:1023,75,0	0/0:24,0:24:72.25:0,72,1277	0/0:18,0:18:54.18:0,54,947	1/1:2,22:24:60.20:818,60,0	0/0:29,0:29:81.26:0,81,1406	1/1:3,25:28:57.19:782,57,0	0/0:31,0:31:84.29:0,84,1491	0/0:26,0:26:72.25:0,72,1277	0/0:24,0:24:69.24:0,69,1205	1/1:1,28:29:69.23:948,69,0	0/0:28,0:28:84.29:0,84,1486	0/0:28,0:28:78.27:0,78,1364	0/0:68,0:68:99:0,187,3232	1/1:1,8:9:18.06:247,18,0	0/0:12,0:12:36.12:0,36,639	0/0:33,0:33:93.32:0,93,1650	1/1:0,11:11:30.10:405,30,0	0/0:38,0:38:99:0,114,1947	0/0:18,0:18:48.16:0,48,843	0/0:23,0:23:66.23:0,66,1163
chr10	89358300	.	C	CT	530.57	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.594;DP=288;FS=30.566;HRun=1;HaplotypeScore=47.3087;InbreedingCoeff=0.8760;MQ=65.89;MQ0=0;MQRankSum=-7.300;QD=24.12;ReadPosRankSum=0.160;VQSLOD=1.8677;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.18:0,66,825	0/0:11,0:11:30.10:0,30,388	0/0:9,0:8:10.02:0,10,96	0/0:7,0:7:11.73:0,12,123	1/1:0,5:5:15.04:162,15,0	0/0:9,0:9:24.04:0,24,281	0/0:16,0:16:45.11:0,45,554	0/0:16,0:16:48.15:0,48,607	1/1:0,1:1:3.01:33,3,0	0/0:18,0:18:48.15:0,48,611	0/0:13,0:13:36.07:0,36,412	1/1:0,2:2:6.02:74,6,0	0/0:5,0:5:15.05:0,15,195	1/1:0,3:3:9.01:93,9,0	0/0:10,0:10:30.10:0,30,389	0/0:11,0:11:27.07:0,27,336	0/0:11,0:10:24.06:0,24,296	1/1:0,6:5:15.05:178,15,0	0/0:6,0:6:15.04:0,15,184	0/0:17,0:17:51.17:0,51,661	0/0:11,0:10:30.10:0,30,387	1/1:0,2:2:6.02:66,6,0	0/0:11,0:11:33.09:0,33,413	0/0:7,0:7:21.07:0,21,272	1/1:0,3:3:9.02:99,9,0	0/0:16,0:16:48.12:0,48,603	0/0:18,0:17:48.16:0,48,622	0/0:18,0:18:54.12:0,54,644
chr10	89358304	.	G	GGCTGGGGATTGA	4627.83	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.386;DP=289;FS=11.464;HRun=0;HaplotypeScore=98.1309;InbreedingCoeff=0.9216;MQ=64.89;MQ0=0;MQRankSum=-8.142;QD=144.62;ReadPosRankSum=0.213;VQSLOD=5.1670;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:66.14:0,66,1957	0/0:11,0:11:33.11:0,33,1146	0/0:9,0:8:16.91:0,17,326	0/0:7,0:7:11.99:0,12,213	1/1:0,4:5:15.05:841,15,0	0/0:6,0:6:18.06:0,18,673	0/0:15,0:15:45.15:0,45,1588	0/0:17,0:17:51.16:0,51,1746	1/1:2,1:3:6.02:355,6,0	0/0:16,0:16:42.14:0,42,1495	0/0:12,0:12:30.10:0,30,1046	1/1:5,1:6:15.05:793,15,0	0/0:5,0:5:15:0,15,469	1/1:1,3:4:12.04:549,12,0	0/0:10,0:10:30.09:0,30,1041	0/0:9,0:9:24.08:0,24,903	0/0:10,0:9:21.03:0,21,697	1/1:3,6:8:21.07:1227,21,0	0/0:7,0:7:21.06:0,21,602	0/0:18,0:18:51.13:0,51,1762	0/0:11,0:10:27.09:0,27,958	1/1:0,2:2:6.02:345,6,0	0/0:11,0:11:30.10:0,30,1053	0/0:7,0:7:18.06:0,18,658	1/1:0,3:3:9.03:517,9,0	0/0:16,0:16:45.15:0,45,1586	0/0:18,0:17:51.13:0,51,1822	0/0:15,0:15:42.14:0,42,1580
chr10	89358417	.	GAGAA	G	1881.03	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=6.096;DP=350;FS=1.368;HRun=0;HaplotypeScore=62.1550;InbreedingCoeff=0.9198;MQ=89.41;MQ0=0;MQRankSum=-4.655;QD=30.84;ReadPosRankSum=5.335;VQSLOD=3.4366;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:57.20:0,57,1479	0/0:9,0:9:24.55:0,25,640	0/0:20,0:18:48.05:0,48,999	0/0:25,0:21:3.27:0,3,802	1/1:1,15:16:33.11:615,33,0	0/0:10,0:10:24.04:0,24,579	0/0:15,0:15:42.14:0,42,1092	0/0:32,0:32:93.28:0,93,2102	1/1:0,7:7:15.05:279,15,0	0/0:16,0:16:48.14:0,48,1103	0/0:17,0:17:45.15:0,45,1197	1/1:0,4:4:6.02:112,6,0	0/0:8,0:8:24.07:0,24,512	1/1:0,7:7:15.05:279,15,0	0/0:14,0:14:39.10:0,39,924	0/0:7,0:7:18.06:0,18,480	0/0:8,0:8:21.07:0,21,532	1/1:0,8:8:12.04:224,12,0	0/0:14,0:14:42.13:0,42,961	0/0:10,0:10:30.10:0,30,743	0/0:9,0:9:21.07:0,21,560	1/1:0,6:6:9.03:168,9,0	0/0:7,0:7:21.04:0,21,464	0/0:18,0:18:45.15:0,45,1162	1/1:0,13:13:21.07:392,21,0	0/0:6,0:6:18.06:0,18,473	0/0:14,0:14:42.14:0,42,1073	0/0:6,0:6:18.06:0,18,448
chr10	89358577	.	G	GTT	1021.13	PASS	AB=1.000;AC=8;AF=0.160;AN=50;BaseQRankSum=-2.863;DP=304;FS=0.000;HRun=10;HaplotypeScore=70.5027;InbreedingCoeff=0.6421;MQ=47.24;MQ0=16;MQRankSum=1.224;QD=21.27;ReadPosRankSum=-0.725;VQSLOD=2.6701;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:27:0,27,268	1/1:1,7:9:14.54:188,15,0	0/0:6,0:4:5.17:0,5,26	0/0:7,0:6:11.97:0,12,111	./.	0/0:19,0:19:39.02:0,39,396	0/0:17,0:15:33.06:0,33,335	0/0:10,0:8:3.11:0,3,11	0/0:2,0:1:1.55:0,2,4	0/0:22,0:21:48.08:0,48,488	0/0:15,0:15:33.03:0,33,335	0/1:5,0:4:0:0,0,0	0/0:9,0:9:24.04:0,24,244	0/0:4,0:4:4.40:0,4,15	1/1:5,8:14:26.28:310,26,0	0/0:21,0:21:51.09:0,51,518	1/1:0,14:15:45.15:654,45,0	./.	0/0:8,0:6:5.23:0,5,19	0/0:5,0:4:3.21:0,3,9	0/1:5,0:4:0:0,0,0	./.	0/0:14,0:16:26.78:0,27,326	0/0:21,0:21:57.12:0,57,580	0/0:2,0:2:2.66:0,3,11	0/0:21,0:21:54.10:0,54,549	0/0:10,0:9:3.24:0,3,29	0/0:20,0:19:56.87:0,57,561
chr10	89361145	.	A	AT	1323.10	PASS	AB=0.983;AC=16;AF=0.286;AN=56;BaseQRankSum=7.216;DP=466;FS=1.188;HRun=5;HaplotypeScore=102.1042;InbreedingCoeff=0.7037;MQ=71.71;MQ0=3;MQRankSum=-6.052;QD=9.95;ReadPosRankSum=-0.262;VQSLOD=0.8775;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:56.43:0,56,543	0/0:12,0:12:17.39:0,17,139	0/1:34,0:18:3.68:4,0,195	0/1:28,1:18:22.58:23,0,119	1/1:6,1:7:15.04:176,15,0	0/0:11,0:11:24.05:0,24,254	0/0:17,0:17:30.05:0,30,322	0/0:25,0:25:27.02:0,27,119	1/1:3,7:10:26.27:251,26,0	0/0:27,0:26:78.18:0,78,826	0/0:14,0:14:30.05:0,30,310	1/1:5,5:10:21.03:200,21,0	0/0:8,0:8:24.06:0,24,256	1/1:8,6:15:45.06:469,45,0	0/0:19,0:19:9.77:0,10,90	0/0:16,0:16:39.05:0,39,400	0/0:20,0:20:41.06:0,41,378	1/1:7,6:14:26.52:324,27,0	0/0:30,0:30:43.70:0,44,157	0/0:11,0:10:4.54:0,5,25	0/0:7,0:7:0.46:0,0,3	1/1:2,1:8:3.01:30,3,0	0/0:21,0:21:54.06:0,54,554	0/0:21,0:21:51.01:0,51,528	1/1:1,4:5:3:29,3,0	0/0:21,0:20:45.10:0,45,482	0/0:10,0:10:3.83:0,4,20	0/0:19,0:19:51.10:0,51,537
chr10	89361148	.	TTTG	T	2026.43	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=11.630;DP=472;FS=2.607;HRun=0;HaplotypeScore=106.5622;InbreedingCoeff=0.4694;MQ=67.45;MQ0=4;MQRankSum=-8.184;QD=10.84;ReadPosRankSum=1.341;VQSLOD=3.4558;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:60.16:0,60,910	0/0:11,0:11:11.78:0,12,208	0/1:40,0:19:7.46:7,0,226	0/0:29,0:16:1.47:0,1,108	1/1:6,0:6:14.62:84,15,0	0/0:13,0:13:29.94:0,30,449	0/0:17,0:17:41.78:0,42,686	0/1:23,0:23:94.44:97,0,94	1/1:9,1:10:27.05:357,27,0	0/0:29,0:28:84.16:0,84,1246	0/0:14,0:14:35.94:0,36,514	1/1:8,2:10:23.91:313,24,0	0/0:8,0:8:24.01:0,24,414	1/1:12,4:16:44.88:572,45,0	0/0:18,0:18:26.83:0,27,272	0/0:16,0:16:39.03:0,39,628	0/0:23,0:23:44.72:0,45,635	1/1:12,2:14:35.76:379,36,0	0/1:30,0:30:16.03:202,0,16	0/1:9,0:8:9.79:10,0,27	0/1:7,0:7:13.58:14,0,45	1/1:8,0:7:3.01:41,3,0	0/0:21,0:21:60.05:0,60,902	0/0:21,0:21:60.16:0,60,969	1/1:4,0:4:3.01:48,3,0	0/0:21,0:20:29.28:0,29,729	0/1:10,0:10:8.89:93,0,9	0/0:19,0:19:43.71:0,44,868
chr10	89361150	.	TG	T	938.10	PASS	AB=0.922;AC=16;AF=0.286;AN=56;BaseQRankSum=7.939;DP=466;FS=3.738;HRun=1;HaplotypeScore=97.8607;InbreedingCoeff=0.6972;MQ=67.41;MQ0=4;MQRankSum=-5.333;QD=6.70;ReadPosRankSum=-1.344;VQSLOD=0.2280;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:59.29:0,59,462	0/0:11,0:11:11.26:0,11,108	0/1:37,3:18:13.96:14,0,147	0/1:28,3:19:27.02:27,0,87	1/1:2,3:5:14.62:85,15,0	0/0:13,0:13:4.01:0,4,212	0/0:17,0:17:22.90:0,23,375	0/0:19,0:22:47.71:0,48,195	1/1:10,0:10:26.40:197,26,0	0/0:28,0:27:81.45:0,81,785	0/0:14,0:14:35.45:0,35,306	1/1:10,0:10:23.56:184,24,0	0/0:9,0:9:9.01:0,9,233	1/1:17,0:17:46.54:331,47,0	0/0:16,0:16:19.89:0,20,95	0/0:14,0:14:38.94:0,39,388	0/0:25,0:25:19.22:0,19,265	1/1:13,1:14:34.32:237,34,0	0/0:26,0:27:62.39:0,62,222	0/0:7,0:6:7.35:0,7,39	0/0:6,0:7:14.46:0,14,75	1/1:8,0:7:3:25,3,0	0/0:20,0:20:49.54:0,50,502	0/0:21,0:21:59.87:0,60,584	1/1:4,0:4:3:26,3,0	0/0:21,1:21:14.25:0,14,421	0/0:9,0:9:10.58:0,11,45	0/0:19,0:19:42.47:0,42,487
chr10	89361151	.	GTTT	G	2069.69	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=11.762;DP=472;FS=1.568;HRun=13;HaplotypeScore=108.8196;InbreedingCoeff=0.8598;MQ=67.00;MQ0=5;MQRankSum=-10.359;QD=15.80;ReadPosRankSum=1.782;VQSLOD=2.5738;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:59.92:0,60,694	0/0:2,0:10:14.20:0,14,199	0/0:42,0:18:3.07:0,3,137	0/0:34,0:19:17.15:0,17,134	0/0:5,0:5:0:0,0,0	0/0:13,0:13:30.06:0,30,521	0/0:16,0:17:47.76:0,48,714	1/1:10,9:19:29.43:353,29,0	1/1:10,0:10:26.08:179,26,0	0/0:28,0:27:69.14:0,69,1077	0/0:14,0:14:33.06:0,33,511	1/1:11,0:11:26.66:193,27,0	0/0:10,0:10:27.08:0,27,448	1/1:17,0:17:40.90:291,41,0	0/0:3,0:16:20.66:0,21,270	0/0:14,0:14:33.09:0,33,519	0/0:20,0:26:53.61:0,54,642	1/1:14,0:14:27.63:181,28,0	1/1:10,17:27:59.39:690,59,0	1/1:3,2:4:2.96:36,3,0	1/1:3,4:7:8.62:85,9,0	1/1:8,0:7:2.98:22,3,0	0/0:18,0:20:57.02:0,57,930	0/0:20,0:21:53.45:0,53,890	1/1:4,0:4:3:28,3,0	0/0:25,0:24:57.51:0,58,810	1/1:2,7:9:17.86:216,18,0	0/0:18,0:19:53.98:0,54,838
chr10	89361154	.	T	TG	657.93	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=3.494;DP=477;FS=7.293;HRun=0;HaplotypeScore=101.6157;InbreedingCoeff=0.3603;MQ=66.54;MQ0=5;MQRankSum=-1.978;QD=7.74;ReadPosRankSum=4.894;VQSLOD=3.1073;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,23:28:56.47:729,56,0	0/1:10,0:10:1.38:1,0,68	0/0:48,0:19:27.94:0,28,211	0/0:35,0:18:16.68:0,17,155	0/0:6,0:6:5.55:0,6,30	0/0:14,0:14:33.06:0,33,418	0/0:17,0:17:47.73:0,48,574	0/0:17,0:17:43.73:0,44,256	0/1:12,0:12:13.88:14,0,18	0/0:28,0:27:80.53:0,81,950	0/0:13,0:13:33.03:0,33,384	0/1:12,0:12:10.81:26,0,11	0/0:10,0:10:30.04:0,30,360	0/0:17,0:17:15.18:0,15,107	0/1:15,0:15:0.43:0,0,39	0/0:14,0:14:36.09:0,36,439	0/0:27,0:27:32.06:0,32,255	0/0:15,0:15:17.68:0,18,116	0/0:25,0:25:70.76:0,71,390	0/0:4,0:3:5.86:0,6,35	0/0:7,0:7:20.58:0,21,129	1/1:8,0:7:1.82:5,2,0	0/0:20,0:20:56.63:0,57,675	0/0:21,0:21:53.15:0,53,684	0/0:3,0:3:2.50:0,2,9	0/0:24,0:23:69.01:0,69,736	0/0:8,0:8:20.38:0,20,115	0/0:19,0:19:50.67:0,51,608
chr10	89361162	.	TTTG	T	1590.09	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=11.416;DP=497;FS=0.892;HRun=0;HaplotypeScore=117.2551;InbreedingCoeff=0.4099;MQ=60.35;MQ0=6;MQRankSum=-9.497;QD=6.77;ReadPosRankSum=-0.415;VQSLOD=2.6461;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:62.03:0,62,814	0/0:10,0:10:0.70:0,1,149	0/1:49,0:15:1.12:1,0,69	0/1:34,0:17:12.13:12,0,69	1/1:6,1:7:10.91:52,11,0	0/0:17,0:17:40.31:0,40,548	0/0:17,0:17:38.43:0,38,579	0/1:18,0:18:31.58:146,0,32	1/1:10,6:16:35.25:293,35,0	0/0:25,0:25:57.91:0,58,760	0/0:15,0:15:38.27:0,38,497	1/1:11,5:16:32.54:314,33,0	0/0:9,0:9:27.06:0,27,369	1/1:11,5:16:38.25:359,38,0	0/0:14,0:14:10.40:0,10,223	0/0:15,0:15:32.53:0,33,451	0/0:27,0:27:5.77:0,6,459	1/1:11,3:14:21.17:198,21,0	0/1:31,0:31:96.46:242,0,96	0/1:7,0:6:4.05:4,0,57	0/1:7,0:7:9.76:26,0,10	1/1:7,1:7:3.01:33,3,0	0/0:20,0:20:44.23:0,44,740	0/0:22,0:22:33.75:0,34,763	1/1:1,1:2:2.80:13,3,0	0/0:25,0:24:65.49:0,65,850	0/1:10,0:10:26.31:81,0,26	0/0:22,0:22:51.52:0,52,710
chr10	89361165	.	G	GT	793.68	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=5.584;DP=487;FS=16.447;HRun=13;HaplotypeScore=103.3915;InbreedingCoeff=0.7192;MQ=59.76;MQ0=6;MQRankSum=-5.544;QD=5.26;ReadPosRankSum=-0.652;VQSLOD=0.5814;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:8.93:0,9,404	0/0:10,0:10:8.42:0,8,54	0/1:48,0:14:13.59:14,0,57	0/0:29,2:14:10.63:0,11,66	1/1:6,0:6:12.02:119,12,0	0/0:15,0:17:34.77:0,35,275	0/0:17,0:17:29.95:0,30,246	0/0:19,0:19:44.66:0,45,334	1/1:10,7:17:26.28:226,26,0	0/0:25,0:25:35.82:0,36,291	0/0:15,0:15:29.93:0,30,245	1/1:9,8:17:26.92:220,27,0	0/0:9,0:9:8.93:0,9,73	1/1:11,3:14:26.88:212,27,0	0/0:16,0:16:21.32:0,21,154	0/0:13,0:13:20.91:0,21,168	0/1:26,0:26:4.88:5,0,167	1/1:8,4:12:15.01:138,15,0	0/0:31,0:32:71.07:0,71,565	0/0:6,0:5:14.96:0,15,121	0/0:6,0:6:5.98:0,6,48	1/1:7,0:6:2.99:23,3,0	0/0:19,0:20:40.86:0,41,323	0/0:22,0:22:44.83:0,45,356	1/1:4,0:4:2.97:20,3,0	0/0:23,0:22:50.77:0,51,410	0/0:12,0:12:23.90:0,24,190	0/0:19,0:19:38.86:0,39,315
chr10	89361374	.	AGT	A	2305.46	PASS	AB=0.954;AC=17;AF=0.304;AN=56;BaseQRankSum=8.985;DP=859;FS=0.000;HRun=0;HaplotypeScore=162.3223;InbreedingCoeff=0.6160;MQ=58.53;MQ0=10;MQRankSum=-4.068;QD=9.04;ReadPosRankSum=1.098;VQSLOD=2.9730;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,2:46:16.63:0,17,1182	0/0:6,0:6:9.01:0,9,115	0/0:32,0:19:6.02:0,6,86	0/0:37,0:25:14.81:0,15,148	1/1:14,13:26:46.07:412,46,0	0/0:18,0:16:13.41:0,13,498	0/0:30,0:28:50.84:0,51,756	0/0:40,0:33:7.13:0,7,183	1/1:14,15:28:50.81:514,51,0	0/0:41,1:41:58.24:0,58,1253	0/0:24,1:26:18.83:0,19,722	1/1:11,13:25:42.40:409,42,0	0/1:25,3:28:36.80:37,0,784	1/1:11,15:25:44.56:364,45,0	0/1:45,2:45:5.92:6,0,1258	0/0:38,3:40:11.52:0,12,1276	0/0:36,1:37:22.25:0,22,807	1/1:9,4:10:4.58:213,5,0	0/0:36,0:33:9.41:0,9,70	0/0:21,0:24:4.14:0,4,31	0/0:46,0:57:75.60:0,76,659	1/1:12,13:22:41.63:350,42,0	0/0:16,0:16:3.91:0,4,396	0/0:32,1:33:3.75:0,4,970	1/1:7,7:14:13.84:172,14,0	0/0:42,1:42:25.70:0,26,1296	0/1:12,0:18:18.91:19,0,31	0/0:27,1:28:39.75:0,40,993
chr10	89361421	.	A	ATGTG	2377.42	PASS	AB=0.825;AC=23;AF=0.411;AN=56;BaseQRankSum=6.280;DP=892;FS=0.998;HRun=0;HaplotypeScore=201.3306;InbreedingCoeff=0.8165;MQ=44.61;MQ0=83;MQRankSum=-6.624;QD=7.27;ReadPosRankSum=-2.366;VQSLOD=2.2808;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:50:99:0,106,1664	0/0:10,0:9:17.28:0,17,345	0/0:22,0:4:11.70:0,12,146	0/0:26,0:10:29.31:0,29,452	1/1:14,1:15:2.94:18,3,0	0/0:21,0:18:35.89:0,36,554	0/0:47,0:39:81.16:0,81,1223	1/1:59,3:27:38.43:568,38,0	1/1:25,0:24:15.88:155,16,0	0/0:63,0:54:99:0,137,2159	0/0:23,0:22:56.16:0,56,815	1/1:19,0:19:18.74:158,19,0	0/0:31,0:30:58.24:0,58,1077	1/1:28,0:24:5.33:38,5,0	0/0:57,0:53:99:0,115,1994	0/0:40,0:37:74.79:0,75,1341	0/0:32,0:32:58.40:0,58,903	1/1:13,0:11:14.50:126,14,0	0/1:26,7:14:32.05:405,0,32	1/1:13,15:25:6.02:154,6,0	1/1:45,10:40:10.88:345,11,0	1/1:11,0:11:2.97:20,3,0	0/0:26,0:22:54.84:0,55,970	0/0:42,0:39:78.24:0,78,1316	1/1:9,0:8:8.91:100,9,0	0/0:45,0:40:62.20:0,62,1144	1/1:16,10:24:30.79:498,31,0	0/0:26,0:25:66.20:0,66,1067
chr10	89361425	.	GTGTGTA	G	1335.52	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=9.156;DP=892;FS=3.259;HRun=0;HaplotypeScore=222.7566;InbreedingCoeff=0.5739;MQ=44.58;MQ0=86;MQRankSum=-7.465;QD=4.42;ReadPosRankSum=-3.093;VQSLOD=1.8942;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:47:99:0,109,3210	0/0:10,0:9:17.80:0,18,625	0/0:21,0:4:12.01:0,12,275	0/0:23,0:10:30.09:0,30,704	1/1:8,5:13:3.01:69,3,0	0/0:21,0:18:41.76:0,42,1163	0/0:48,0:39:84.22:0,84,2329	0/1:67,0:30:99:242,0,216	1/1:12,11:22:7.59:233,8,0	0/0:63,0:53:99:0,141,4249	0/0:23,0:22:56.19:0,56,1470	1/1:12,7:19:16.76:236,17,0	0/0:33,0:31:61.27:0,61,2061	1/1:17,9:22:4.38:135,4,0	0/0:61,0:57:99:0,144,3939	0/0:41,0:38:80.81:0,81,2503	0/0:33,0:32:50.66:0,51,1709	1/1:10,1:9:21:281,21,0	0/1:35,0:15:56.51:57,0,228	0/0:28,0:25:9.03:0,9,179	0/1:60,0:44:99:101,0,242	1/1:9,2:11:2.97:20,3,0	0/0:28,0:24:62.63:0,63,1988	0/0:41,0:38:84.76:0,85,2638	1/1:4,4:7:9.02:140,9,0	0/0:41,0:36:77.33:0,77,2534	0/1:26,0:24:0.85:1,0,362	0/0:26,0:25:69.23:0,69,1984
chr10	89361427	.	GTGTA	G	531.88	PASS	AB=0.984;AC=16;AF=0.286;AN=56;BaseQRankSum=9.428;DP=904;FS=2.706;HRun=0;HaplotypeScore=203.5062;InbreedingCoeff=0.6652;MQ=44.43;MQ0=93;MQRankSum=-4.788;QD=2.15;ReadPosRankSum=-3.338;VQSLOD=2.3154;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:49:99:0,112,2620	0/0:10,0:9:19.22:0,19,503	0/0:20,0:4:11.99:0,12,222	0/0:22,0:10:30.01:0,30,556	1/1:12,0:12:3.01:31,3,0	0/0:21,0:18:41.76:0,42,972	0/0:50,0:41:90.19:0,90,1995	0/1:79,0:33:56.97:57,0,297	1/1:22,1:22:15.19:147,15,0	0/0:65,0:53:99:0,149,3543	0/0:23,0:22:56.19:0,56,1215	1/1:19,0:19:12.98:126,13,0	0/0:32,0:30:64.13:0,64,1684	1/1:25,0:21:5.91:63,6,0	0/0:62,0:57:99:0,130,3251	0/0:39,0:36:70.30:0,70,2060	0/0:34,0:33:69.56:0,70,1470	1/1:10,1:9:19.96:170,20,0	0/0:34,0:15:1.46:0,1,262	0/0:27,0:24:6.91:0,7,108	0/1:57,2:43:24.54:25,0,270	1/1:11,0:11:2.97:20,3,0	0/0:29,0:25:65.35:0,65,1639	0/0:41,0:38:87.75:0,88,2189	1/1:8,0:7:8.88:72,9,0	0/0:43,0:38:85.92:0,86,2190	0/0:27,0:25:13.66:0,14,394	0/0:26,0:25:69.11:0,69,1607
chr10	89361441	.	A	ATG	193.73	PASS	AB=0.970;AC=9;AF=0.167;AN=54;BaseQRankSum=8.389;DP=891;FS=32.028;HRun=0;HaplotypeScore=173.8503;InbreedingCoeff=0.5775;MQ=44.75;MQ0=93;MQRankSum=-8.278;QD=2.25;ReadPosRankSum=-1.716;VQSLOD=1.2455;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:51:99:0,108,1546	0/0:12,0:11:26.39:0,26,396	0/1:9,0:3:3.84:4,0,80	0/0:10,0:5:2.06:0,2,139	1/1:10,0:10:0.47:1,0,0	0/0:20,0:17:39.09:0,39,559	0/0:50,0:40:90.31:0,90,1367	0/0:83,0:33:40.96:0,41,786	0/1:18,2:19:5.52:97,0,6	0/0:69,0:57:99:0,143,2330	0/0:19,0:18:42.11:0,42,598	1/1:16,2:17:11.19:117,11,0	0/0:31,0:29:72.23:0,72,1064	1/1:19,2:17:10.74:69,11,0	0/0:58,0:53:99:0,129,1899	0/0:35,0:33:89.86:0,90,1256	0/0:31,0:30:39.86:0,40,947	0/1:8,0:6:1.79:33,0,2	0/0:34,0:14:23.54:0,24,290	0/0:30,0:26:21.04:0,21,294	0/0:67,0:46:34.64:0,35,447	./.	0/0:36,0:32:76.34:0,76,1248	0/0:46,0:43:95.90:0,96,1463	0/0:7,0:6:0.80:0,1,2	0/0:48,0:41:99:0,117,1733	0/0:31,0:29:43.11:0,43,677	0/0:26,0:25:71.70:0,72,990
chr10	89361457	.	ATG	A	180.38	PASS	AB=0.896;AC=11;AF=0.204;AN=54;BaseQRankSum=7.562;DP=937;FS=2.067;HRun=0;HaplotypeScore=182.6000;InbreedingCoeff=0.5120;MQ=44.34;MQ0=100;MQRankSum=-7.143;QD=1.70;ReadPosRankSum=-2.679;VQSLOD=2.4426;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,2:50:99:0,102,1704	0/0:13,0:11:26.45:0,26,423	./.	0/0:3,0:1:3.01:0,3,42	1/1:9,1:10:3.01:30,3,0	0/0:20,0:16:33.11:0,33,561	0/0:60,0:45:99:0,99,1651	0/0:101,0:41:83.73:0,84,1385	0/1:15,5:19:19.97:61,0,20	0/0:70,0:59:99:0,159,2569	0/0:22,0:20:48.16:0,48,821	1/1:13,6:18:2.47:66,2,0	0/0:38,0:36:93.28:0,93,1535	1/1:19,4:20:10.35:96,10,0	0/0:58,0:52:99:0,129,2079	0/0:31,0:29:78.27:0,78,1326	0/0:29,1:30:1.33:0,1,947	0/1:7,1:6:28.36:28,0,30	0/0:41,0:18:36.05:0,36,490	0/0:25,0:21:21.07:0,21,359	0/0:66,0:45:26.48:0,26,493	0/1:15,0:15:0.04:0,0,0	0/0:38,0:34:81.30:0,81,1390	0/0:50,0:47:93.24:0,93,1508	1/1:9,2:10:3.48:34,3,0	0/0:57,0:48:99:0,114,2058	0/0:29,0:28:51.11:0,51,865	0/0:24,0:24:65.93:0,66,1024
chr10	89361465	.	GTA	G	111.46	PASS	AB=0.901;AC=9;AF=0.161;AN=56;BaseQRankSum=8.597;DP=954;FS=5.794;HRun=0;HaplotypeScore=193.6441;InbreedingCoeff=0.2162;MQ=44.33;MQ0=94;MQRankSum=-7.363;QD=0.91;ReadPosRankSum=-5.242;VQSLOD=0.8542;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:54:99:0,117,1908	0/0:14,0:12:17.89:0,18,448	0/0:1,0:1:2.97:0,3,20	0/0:3,0:1:3.01:0,3,57	1/1:13,1:14:2.71:13,3,0	0/0:22,0:18:42.03:0,42,669	0/0:64,0:48:99:0,111,1979	0/0:103,0:49:85.46:0,85,1358	0/1:21,0:20:26.65:27,0,42	0/0:68,0:57:99:0,154,2689	0/0:24,0:22:57.15:0,57,987	0/1:20,1:17:12.18:50,0,12	0/0:36,0:35:99:0,99,1784	0/1:18,4:19:27.47:58,0,27	0/0:61,0:55:99:0,132,2347	0/0:33,0:31:87.15:0,87,1468	0/0:33,0:32:21.08:0,21,1046	0/1:10,0:8:37.27:38,0,37	0/0:36,0:17:39.96:0,40,466	0/0:21,0:17:21.06:0,21,295	0/0:65,0:42:26.44:0,26,383	0/1:11,8:19:15.45:18,0,15	0/0:36,0:33:75.95:0,76,1489	0/0:44,0:41:90.26:0,90,1626	1/1:11,4:14:8.52:44,9,0	0/0:60,0:51:99:0,112,2336	0/0:28,0:27:52.97:0,53,728	0/0:23,0:23:47.29:0,47,1072
chr10	89361475	.	ATGTG	A	2399.01	PASS	AB=0.770;AC=7;AF=0.125;AN=56;BaseQRankSum=7.597;DP=989;FS=18.570;HRun=0;HaplotypeScore=228.7069;InbreedingCoeff=0.4123;MQ=44.75;MQ0=89;MQRankSum=-5.061;QD=9.09;ReadPosRankSum=0.917;VQSLOD=1.0462;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:54:99:0,111,2623	0/0:11,0:9:21.04:0,21,433	0/0:1,0:1:3.01:0,3,75	0/0:3,0:1:3.01:0,3,77	0/0:19,0:18:14.12:0,14,71	0/0:22,0:18:42.13:0,42,890	0/0:66,0:50:98.96:0,99,2302	0/1:71,28:49:99:635,0,322	0/0:25,0:23:31:0,31,260	0/0:60,0:53:99:0,132,2821	0/0:23,0:21:57.15:0,57,1262	0/0:23,0:19:4.57:0,5,128	0/0:37,0:36:99:0,102,2358	0/0:25,0:20:24.82:0,25,133	0/0:56,0:50:99:0,129,2888	0/0:37,0:35:96.26:0,96,2064	0/0:32,0:31:67.74:0,68,1459	0/0:7,0:7:14.49:0,14,127	0/1:23,17:23:85.81:415,0,86	1/1:10,11:19:20.96:357,21,0	0/1:60,15:50:49.40:394,0,49	0/0:31,0:30:35.69:0,36,262	0/0:36,0:34:90.24:0,90,2086	0/0:49,0:47:99:0,102,2272	0/0:17,0:16:27.65:0,28,167	0/0:62,0:55:99:0,138,2973	1/1:5,23:28:20.65:738,21,0	0/0:24,0:23:51.15:0,51,1143
chr10	89361497	.	GTA	G	1906.32	PASS	AB=0.795;AC=9;AF=0.161;AN=56;BaseQRankSum=8.265;DP=1010;FS=39.631;HRun=0;HaplotypeScore=227.0528;InbreedingCoeff=0.3613;MQ=45.29;MQ0=57;MQRankSum=-4.389;QD=9.53;ReadPosRankSum=-3.575;VQSLOD=1.3637;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:54:99:0,108,1823	0/0:7,0:6:15.05:0,15,274	0/0:3,0:3:1.97:0,2,35	0/0:7,0:2:5.90:0,6,42	1/1:19,6:24:21.31:272,21,0	0/0:19,0:17:36.12:0,36,658	0/0:56,0:46:99:0,108,1786	0/0:99,0:53:99:0,114,1469	0/1:30,3:30:68.95:147,0,69	0/0:56,0:49:99:0,132,2120	0/0:24,0:23:64.39:0,64,991	0/1:23,9:28:99:107,0,110	0/0:43,0:42:99:0,120,2020	1/1:15,13:22:23.97:339,24,0	0/0:55,0:51:99:0,141,2370	0/0:35,1:35:54.44:0,54,1518	0/0:36,0:35:87.65:0,88,1279	0/1:11,3:12:1.97:188,0,2	0/0:35,2:22:41.78:0,42,412	0/0:19,0:18:36.12:0,36,566	0/0:71,2:58:39.61:0,40,630	0/1:28,14:40:73.42:554,0,73	0/0:36,0:35:74.28:0,74,1529	0/0:45,0:42:77.82:0,78,1596	0/1:15,11:25:55.47:450,0,55	0/0:56,1:52:99:0,104,2296	0/0:27,0:27:51.13:0,51,656	0/0:17,0:16:42.14:0,42,767
chr10	89361523	.	ATG	A	220.34	PASS	AB=0.850;AC=3;AF=0.054;AN=56;BaseQRankSum=6.003;DP=1116;FS=17.464;HRun=0;HaplotypeScore=276.9344;InbreedingCoeff=0.5561;MQ=45.27;MQ0=51;MQRankSum=-3.604;QD=2.00;ReadPosRankSum=-1.490;VQSLOD=0.9928;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,106,1695	0/0:11,0:11:24.08:0,24,386	0/0:17,0:3:9.03:0,9,128	0/0:16,0:2:6.02:0,6,100	0/0:33,9:41:50.64:0,51,780	0/0:18,0:18:7.15:0,7,636	0/0:57,0:48:90.74:0,91,1448	0/0:94,0:51:99:0,114,1672	0/0:48,6:50:36.92:0,37,538	0/0:48,0:43:99:0,108,1635	0/0:24,0:24:64.46:0,64,1035	0/1:41,9:48:11.47:11,0,553	0/0:42,0:41:99:0,108,1696	0/0:43,0:39:49.22:0,49,656	0/0:46,0:44:99:0,123,1974	0/0:42,0:41:99:0,114,1763	0/0:33,0:33:67.09:0,67,1086	0/0:25,1:25:19.71:0,20,813	0/0:44,0:25:48.16:0,48,760	0/0:20,0:19:39.13:0,39,647	1/1:28,28:49:25.05:311,25,0	0/0:54,9:60:47.94:0,48,1094	0/0:33,0:33:87.24:0,87,1329	0/0:36,0:36:66.20:0,66,1063	0/0:37,8:43:44.43:0,44,971	0/0:54,0:49:99:0,126,2031	0/0:26,0:26:54.08:0,54,801	0/0:13,0:13:33.11:0,33,546
chr10	89361569	.	ATGTG	A	227.30	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.426;DP=1237;FS=22.152;HRun=0;HaplotypeScore=333.1084;InbreedingCoeff=0.7455;MQ=45.03;MQ0=62;MQRankSum=-5.945;QD=3.34;ReadPosRankSum=-2.421;VQSLOD=0.8404;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:62:99:0,129,2890	0/0:9,0:9:24.08:0,24,609	0/0:30,0:3:5.99:0,6,49	0/0:28,0:7:15.05:0,15,273	0/0:53,0:51:62.84:0,63,1394	0/0:18,0:18:45.14:0,45,987	0/0:61,0:55:99:0,125,2673	0/0:85,0:32:63.21:0,63,1382	0/0:71,0:67:47.42:0,47,1899	0/0:55,0:52:99:0,132,3002	0/0:20,0:19:38.59:0,39,905	0/0:69,0:68:1.82:0,2,1551	0/0:36,0:34:83.88:0,84,1770	0/0:58,1:55:53.38:0,53,1435	0/0:59,0:53:99:0,120,2542	0/0:42,0:40:99:0,105,2422	0/0:39,0:37:74.95:0,75,1542	0/0:39,0:36:30.22:0,30,1306	0/0:34,0:19:42.14:0,42,1023	0/0:32,0:32:39.13:0,39,832	1/1:59,8:53:28.37:321,28,0	0/0:68,0:63:34.60:0,35,1110	0/0:19,0:19:42.10:0,42,959	0/0:45,0:46:92.83:0,93,2275	0/0:48,0:48:43.88:0,44,1303	0/0:55,0:47:99:0,117,2444	0/0:17,0:16:39.11:0,39,815	0/0:8,0:8:24:0,24,266
chr10	89361607	.	ATGTGTG	A	2596.09	PASS	AB=0.763;AC=17;AF=0.315;AN=54;BaseQRankSum=9.928;DP=1169;FS=11.560;HRun=0;HaplotypeScore=303.5163;InbreedingCoeff=0.3017;MQ=44.85;MQ0=67;MQRankSum=-10.965;QD=4.48;ReadPosRankSum=-3.704;VQSLOD=0.6335;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:68,0:68:97.74:0,98,2692	0/0:15,0:15:25.64:0,26,641	0/0:19,0:1:3.01:0,3,55	./.	0/1:34,7:41:35.87:94,0,36	0/0:18,0:18:36.12:0,36,1026	0/0:60,0:55:89.72:0,90,2334	1/1:68,2:36:16.06:373,16,0	0/1:37,25:60:49.42:234,0,49	0/0:56,0:51:95.12:0,95,2183	0/0:13,0:12:18.04:0,18,449	0/1:38,28:64:12.99:757,0,13	0/0:40,0:39:82.97:0,83,2177	0/1:28,25:52:41.29:236,0,41	0/0:53,0:51:86.88:0,87,2056	0/0:48,0:49:99:0,113,2979	0/0:32,0:30:60.18:0,60,1758	0/1:24,14:35:73.26:147,0,73	1/1:31,0:15:1.06:182,1,0	1/1:9,27:36:31.52:214,32,0	1/1:36,0:62:0.89:24,1,0	0/1:42,13:51:52.39:73,0,52	0/0:14,0:12:15.05:0,15,403	0/0:53,0:56:99:0,104,2846	0/1:34,6:38:5.27:220,0,5	0/0:50,0:46:98.63:0,99,2391	1/1:3,9:12:14.04:212,14,0	0/0:9,0:9:27.09:0,27,803
chr10	89369345	.	CTGTGTGTGTGTG	C	1066.75	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.692;DP=399;FS=0.000;HRun=0;HaplotypeScore=127.4856;InbreedingCoeff=0.6474;MQ=53.82;MQ0=7;MQRankSum=-4.487;QD=21.33;ReadPosRankSum=-0.126;VQSLOD=2.3220;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:42.14:0,42,2158	0/0:5,0:5:12.04:0,12,228	0/0:4,0:2:3.01:0,3,174	0/0:13,0:8:3.01:0,3,159	0/0:5,0:5:0.47:0,0,1	0/0:22,0:25:51.16:0,51,2326	0/0:15,0:14:21.07:0,21,912	1/1:12,0:10:3.01:40,3,0	0/0:13,0:12:5.96:0,6,96	0/0:13,0:13:21.07:0,21,889	0/0:5,0:5:6.02:0,6,350	0/0:13,0:12:9.50:0,10,130	0/0:10,0:10:18.06:0,18,904	0/0:8,0:8:12.04:0,12,168	0/0:12,0:11:6.02:0,6,107	0/0:16,0:16:24.08:0,24,1188	0/0:33,0:33:11.99:0,12,227	0/0:14,0:14:9.03:0,9,192	1/1:6,5:5:11.96:251,12,0	1/1:6,4:9:6.02:208,6,0	0/0:33,0:33:18.06:0,18,790	0/0:4,0:4:4.26:0,4,62	0/0:10,0:10:24.08:0,24,1246	0/0:27,0:31:54.11:0,54,2481	0/0:10,0:9:13.84:0,14,223	0/0:20,0:20:39.13:0,39,1658	1/1:7,10:16:21.07:705,21,0	0/0:13,0:12:15.05:0,15,674
chr10	89369373	.	GTGTGTGTA	G	973.20	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=9.623;DP=393;FS=11.456;HRun=0;HaplotypeScore=87.2399;InbreedingCoeff=0.4872;MQ=55.28;MQ0=7;MQRankSum=-5.214;QD=6.08;ReadPosRankSum=1.084;VQSLOD=1.0073;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:48.13:0,48,1611	0/1:10,0:10:12.97:63,0,13	0/0:15,0:3:8.98:0,9,168	0/0:16,0:11:29.94:0,30,374	1/1:12,0:12:20.16:149,20,0	0/0:24,0:24:57.12:0,57,1709	0/0:14,0:13:33.04:0,33,683	0/0:17,0:17:50.79:0,51,414	1/1:11,0:11:2.66:26,3,0	0/0:8,0:8:24.05:0,24,720	0/0:4,0:3:9.01:0,9,291	1/1:11,0:10:8.84:79,9,0	0/0:7,0:7:21.03:0,21,684	1/1:9,0:8:9:79,9,0	1/1:11,0:10:2.60:10,3,0	0/0:14,0:14:36.05:0,36,979	0/1:31,0:31:22.82:29,0,23	1/1:13,0:13:11.79:182,12,0	0/1:9,0:6:39.94:66,0,40	0/1:5,0:4:10.96:67,0,11	0/0:32,0:32:18.03:0,18,344	1/1:2,4:6:5.38:95,5,0	0/0:13,0:13:35.21:0,35,1116	0/0:24,0:24:57.11:0,57,1912	1/1:16,1:16:5.46:109,5,0	0/0:18,0:18:48:0,48,1421	0/1:15,0:14:65.50:206,0,65	0/0:7,0:6:18.06:0,18,721
chr10	89369375	.	GTGTGTA	G	1650.75	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=9.009;DP=391;FS=10.989;HRun=0;HaplotypeScore=73.6043;InbreedingCoeff=0.5711;MQ=56.85;MQ0=7;MQRankSum=-5.750;QD=9.71;ReadPosRankSum=0.808;VQSLOD=0.8420;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:48.11:0,48,1240	1/1:1,9:10:9.03:213,9,0	0/0:16,0:4:11.99:0,12,172	0/0:19,0:13:35.89:0,36,368	1/1:11,1:12:19.93:150,20,0	0/0:23,0:23:54.13:0,54,1314	0/0:14,0:13:33.04:0,33,539	0/0:19,0:19:56.80:0,57,467	1/1:1,9:10:2.67:72,3,0	0/0:8,0:8:24.05:0,24,565	0/0:4,0:3:9.01:0,9,239	1/1:0,10:9:9.03:217,9,0	0/0:7,0:7:21.03:0,21,555	1/1:1,8:8:9.03:217,9,0	1/1:0,11:10:3.01:55,3,0	0/0:13,0:13:36.03:0,36,800	1/1:4,26:30:1.45:123,1,0	1/1:12,1:13:32.87:332,33,0	0/1:10,0:7:34.75:35,0,62	0/1:5,0:4:10.99:39,0,11	0/0:31,0:31:12.02:0,12,194	1/1:5,1:6:6.02:106,6,0	0/1:13,0:13:6.68:7,0,839	0/0:23,0:23:57.11:0,57,1499	1/1:2,14:15:9.03:164,9,0	0/0:17,0:17:45.13:0,45,1072	0/1:15,0:14:70.05:115,0,70	0/0:7,0:6:18.06:0,18,555
chr10	89369379	.	GTA	G	608.19	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=8.278;DP=390;FS=5.683;HRun=0;HaplotypeScore=55.6936;InbreedingCoeff=0.8261;MQ=57.29;MQ0=5;MQRankSum=-3.413;QD=4.08;ReadPosRankSum=0.427;VQSLOD=1.2841;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:35.07:0,35,444	1/1:9,0:9:8.97:70,9,0	0/0:18,0:6:17.93:0,18,177	0/0:21,0:14:38.88:0,39,335	1/1:13,0:13:23.19:174,23,0	0/0:23,0:23:41.08:0,41,560	0/0:14,0:13:27.96:0,28,289	0/0:21,0:21:62.80:0,63,521	1/1:9,0:9:2.57:24,3,0	0/0:9,0:9:27.04:0,27,344	0/0:4,0:3:9.01:0,9,124	1/1:10,0:9:8.99:74,9,0	0/0:7,0:7:20.76:0,21,262	1/1:9,0:8:8.98:74,9,0	1/1:11,0:10:2.37:8,2,0	0/0:11,0:11:33.04:0,33,435	1/1:29,0:29:7.63:41,8,0	1/1:11,0:11:29.80:220,30,0	0/0:12,0:9:17.49:0,17,132	0/0:8,0:7:7.92:0,8,42	1/1:4,24:28:3.01:41,3,0	1/1:5,0:5:5.22:31,5,0	0/0:12,0:12:36:0,36,392	0/0:23,0:23:27.75:0,28,646	1/1:15,0:14:6.45:48,6,0	0/0:17,0:17:40.33:0,40,502	0/0:17,0:16:25.32:0,25,126	0/0:6,0:6:18:0,18,230
chr10	89369454	.	GAAAAAC	G	894.65	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=3.342;DP=347;FS=0.812;HRun=0;HaplotypeScore=94.2324;InbreedingCoeff=0.4553;MQ=72.06;MQ0=1;MQRankSum=-0.529;QD=13.76;ReadPosRankSum=-0.563;VQSLOD=2.5592;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:48.16:0,48,1447	0/0:8,0:8:14.30:0,14,94	0/0:22,0:13:20.20:0,20,236	0/0:17,0:11:16.78:0,17,270	0/0:19,0:18:28.35:0,28,198	0/0:24,0:24:63.22:0,63,1873	0/0:13,0:12:24.08:0,24,773	1/1:3,6:9:18.04:262,18,0	0/0:9,0:9:0.77:0,1,19	0/0:13,0:13:30.10:0,30,857	0/0:13,0:13:30.10:0,30,938	0/0:5,0:5:6.82:0,7,64	0/0:6,0:6:12.04:0,12,399	0/0:5,0:5:2.61:0,3,13	0/1:10,0:10:10.86:11,0,26	0/0:9,0:9:13.58:0,14,330	0/1:18,0:18:12.85:13,0,39	0/0:15,0:14:12.55:0,13,79	0/1:8,0:8:60.71:166,0,61	1/1:7,3:10:24.08:401,24,0	0/0:7,0:7:9.03:0,9,245	0/0:5,0:5:4.48:0,4,21	0/0:6,0:6:12.04:0,12,292	0/0:13,0:13:27.02:0,27,650	0/0:23,0:23:25.56:0,26,177	0/0:21,0:21:51.17:0,51,1651	1/1:2,8:10:9.03:192,9,0	0/0:9,0:8:24.08:0,24,801
chr10	89369471	.	AC	A	404.04	PASS	AB=0.838;AC=16;AF=0.286;AN=56;BaseQRankSum=9.476;DP=320;FS=5.350;HRun=1;HaplotypeScore=63.3747;InbreedingCoeff=0.2645;MQ=63.36;MQ0=4;MQRankSum=-8.143;QD=3.78;ReadPosRankSum=1.397;VQSLOD=0.4846;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.18:0,60,839	0/1:4,2:7:1.14:58,0,1	0/0:21,1:9:25.79:0,26,237	0/0:18,0:8:18.03:0,18,224	0/1:16,0:15:24.05:24,0,74	0/0:26,0:26:78.22:0,78,1075	0/0:10,0:9:27.09:0,27,395	0/0:13,0:12:4.62:0,5,182	0/1:3,2:5:17.84:21,0,18	0/0:13,0:13:39.12:0,39,548	0/0:14,0:14:42.14:0,42,611	0/1:2,1:3:7.73:8,0,36	0/0:5,0:5:15.05:0,15,219	0/1:3,1:4:7.24:12,0,7	1/1:3,2:5:14.67:103,15,0	0/0:5,0:5:7.29:0,7,149	1/1:6,5:13:24.85:174,25,0	0/1:8,2:10:6.04:75,0,6	0/1:11,0:11:20.54:21,0,144	0/0:9,0:9:4.94:0,5,67	0/0:4,0:4:12.02:0,12,152	1/1:3,0:3:0.15:6,0,0	0/0:4,0:4:12.03:0,12,154	0/0:11,0:11:30.04:0,30,373	0/1:20,0:21:46.98:54,0,47	0/0:25,0:25:75.24:0,75,1064	1/1:8,0:8:4.66:13,5,0	0/0:11,0:10:30.08:0,30,417
chr10	89369475	.	AC	A	1136.79	PASS	AB=0.833;AC=21;AF=0.375;AN=56;BaseQRankSum=10.880;DP=322;FS=0.520;HRun=1;HaplotypeScore=62.3336;InbreedingCoeff=0.7854;MQ=57.60;MQ0=4;MQRankSum=-7.534;QD=11.26;ReadPosRankSum=-0.967;VQSLOD=1.2068;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:46.29:0,46,918	1/1:6,2:8:6.59:70,7,0	0/0:21,0:7:16.83:0,17,191	0/0:19,0:7:13.78:0,14,175	1/1:6,8:14:37.84:277,38,0	0/0:25,0:25:75.23:0,75,1104	0/0:10,0:9:27.09:0,27,413	0/0:14,0:13:21.86:0,22,319	1/1:3,2:5:8.98:74,9,0	0/0:13,0:13:39.13:0,39,578	0/0:14,0:14:42.14:0,42,640	1/1:1,1:2:5.73:36,6,0	0/0:5,0:5:15.05:0,15,230	1/1:4,0:4:5.98:46,6,0	1/1:5,2:7:17.38:121,17,0	0/1:4,1:5:8.36:8,0,169	1/1:14,4:18:25.67:162,26,0	1/1:10,2:11:3.53:99,4,0	0/0:7,0:7:14.98:0,15,268	0/0:10,0:10:28.71:0,29,198	0/0:4,0:4:12.04:0,12,181	1/1:0,3:3:8.65:56,9,0	0/0:3,0:3:9.02:0,9,117	0/0:8,0:8:24.07:0,24,346	1/1:13,9:22:50.29:387,50,0	0/0:24,0:24:72.24:0,72,1103	0/0:9,0:9:0.75:0,1,23	0/0:11,0:10:30.10:0,30,455
chr10	89369478	.	AAC	A	1472.14	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=10.699;DP=318;FS=1.111;HRun=0;HaplotypeScore=65.6797;InbreedingCoeff=0.7886;MQ=57.08;MQ0=4;MQRankSum=-8.250;QD=15.50;ReadPosRankSum=-1.605;VQSLOD=3.2473;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:49.22:0,49,1109	1/1:5,3:8:21.94:247,22,0	0/0:22,0:7:17.79:0,18,222	0/0:21,0:7:11.97:0,12,185	1/1:14,0:13:31.79:242,32,0	0/0:23,0:23:69.24:0,69,1292	0/0:10,0:9:27.09:0,27,512	0/0:14,0:13:21.61:0,22,341	1/1:5,0:5:6.48:59,6,0	0/0:13,0:13:36.12:0,36,654	0/0:14,0:14:42.13:0,42,764	1/1:2,0:2:5.88:43,6,0	0/0:5,0:5:15.05:0,15,284	1/1:3,0:3:6.01:56,6,0	1/1:7,0:7:17.25:173,17,0	0/1:5,0:5:13.10:13,0,212	1/1:16,1:17:22.51:231,23,0	1/1:12,0:11:5.56:124,6,0	0/0:8,0:8:4.23:0,4,328	0/0:10,0:10:9.48:0,9,84	0/0:4,0:4:12.01:0,12,192	1/1:3,0:3:8.88:70,9,0	0/0:2,0:2:6.02:0,6,114	0/0:7,0:7:21.07:0,21,398	1/1:19,0:19:47.67:416,48,0	0/0:25,0:25:75.26:0,75,1407	0/0:10,0:10:9.43:0,9,46	0/0:12,0:11:33.09:0,33,571
chr10	89369479	.	AC	A	1081.75	PASS	AB=0.833;AC=21;AF=0.375;AN=56;BaseQRankSum=10.544;DP=313;FS=0.000;HRun=1;HaplotypeScore=60.1506;InbreedingCoeff=0.8003;MQ=55.46;MQ0=4;MQRankSum=-7.601;QD=11.63;ReadPosRankSum=-1.711;VQSLOD=1.0717;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:49.18:0,49,912	1/1:8,0:8:9.80:84,10,0	0/0:21,0:6:18.01:0,18,199	0/0:19,1:7:11.98:0,12,151	1/1:6,8:13:34.95:249,35,0	0/0:23,0:23:69.22:0,69,1035	0/0:11,0:10:30.09:0,30,438	0/0:15,0:14:22.56:0,23,318	1/1:3,2:5:8.98:73,9,0	0/0:12,0:12:36.12:0,36,533	0/0:14,0:14:42.13:0,42,621	1/1:1,1:2:5.73:35,6,0	0/0:5,0:5:15.05:0,15,229	1/1:2,0:2:5.97:45,6,0	1/1:7,0:7:16.36:105,16,0	0/1:4,1:5:8.10:8,0,169	1/1:17,0:17:19.36:147,19,0	1/1:10,2:11:11.84:120,12,0	0/0:8,0:8:4.22:0,4,267	0/0:6,0:6:12.54:0,13,87	0/0:5,0:5:15.01:0,15,184	1/1:0,3:3:8.65:56,9,0	0/0:2,0:2:6.02:0,6,92	0/0:7,0:7:21.07:0,21,321	1/1:9,9:18:47.37:363,47,0	0/0:25,0:25:75.24:0,75,1128	0/0:10,0:10:5.04:0,5,45	0/0:12,0:11:33.09:0,33,480
chr10	89369482	.	AAC	A	986.74	PASS	AB=0.833;AC=21;AF=0.375;AN=56;BaseQRankSum=9.918;DP=305;FS=2.653;HRun=0;HaplotypeScore=64.4396;InbreedingCoeff=0.7914;MQ=55.72;MQ0=4;MQRankSum=-8.638;QD=10.96;ReadPosRankSum=-2.340;VQSLOD=2.8156;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:59.64:0,60,951	1/1:8,0:8:9.19:48,9,0	0/0:19,0:4:11.99:0,12,123	0/0:20,0:7:11.73:0,12,134	1/1:7,6:12:32.06:240,32,0	0/0:22,0:22:66.21:0,66,1150	0/0:11,0:10:30.07:0,30,463	0/0:18,0:17:23.42:0,23,183	1/1:3,1:4:6.01:57,6,0	0/0:12,0:12:36.11:0,36,555	0/0:14,0:14:42.13:0,42,708	1/1:1,1:2:5.88:43,6,0	0/0:5,0:5:15.05:0,15,251	1/1:2,0:2:6:53,6,0	1/1:7,0:6:7.74:40,8,0	0/1:4,1:5:12.78:13,0,200	1/1:18,0:18:12.80:70,13,0	1/1:12,0:11:10.11:166,10,0	0/0:7,0:7:20.85:0,21,161	0/0:6,0:6:8.69:0,9,45	0/0:4,0:4:12.01:0,12,166	1/1:0,3:3:8.88:69,9,0	0/0:2,0:2:6.02:0,6,108	0/0:7,0:7:21.07:0,21,365	1/1:9,7:16:44.68:389,45,0	0/0:25,0:25:75.26:0,75,1328	0/0:9,0:9:9.78:0,10,43	0/0:12,0:11:33.11:0,33,575
chr10	89369483	.	AC	A	1028.02	PASS	AB=0.972;AC=22;AF=0.393;AN=56;BaseQRankSum=9.760;DP=303;FS=1.123;HRun=1;HaplotypeScore=58.8823;InbreedingCoeff=0.7428;MQ=57.53;MQ0=4;MQRankSum=-8.123;QD=9.61;ReadPosRankSum=-2.658;VQSLOD=0.2038;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:43.17:0,43,750	1/1:7,0:7:9.03:92,9,0	0/0:18,0:4:11.92:0,12,93	0/0:19,2:8:11.97:0,12,121	1/1:12,1:12:31.82:215,32,0	0/0:22,0:22:66.20:0,66,923	0/0:12,0:11:33.08:0,33,422	0/1:16,1:16:26.38:26,0,46	1/1:4,0:4:5.98:47,6,0	0/0:12,0:12:36.10:0,36,467	0/0:14,0:14:42.13:0,42,576	1/1:2,0:2:5.58:33,6,0	0/0:5,0:5:15.05:0,15,213	1/1:2,0:2:5.97:44,6,0	1/1:5,2:6:9.12:80,9,0	0/1:5,0:5:7.78:8,0,156	1/1:18,0:18:28.30:136,28,0	1/1:12,1:12:19.65:162,20,0	0/0:7,0:7:17.05:0,17,78	0/0:5,0:5:11.04:0,11,35	0/0:4,0:4:12.01:0,12,145	1/1:3,0:3:8.64:54,9,0	0/0:2,0:2:6.02:0,6,86	0/0:8,0:8:24.02:0,24,299	1/1:14,2:16:44.26:334,44,0	0/0:25,0:25:75.25:0,75,1066	0/0:8,0:8:11.29:0,11,36	0/0:12,0:11:33.11:0,33,465
chr10	89369490	.	AC	A	196.76	PASS	AB=0.786;AC=6;AF=0.107;AN=56;BaseQRankSum=6.021;DP=299;FS=6.159;HRun=1;HaplotypeScore=58.9287;InbreedingCoeff=0.4795;MQ=60.18;MQ0=3;MQRankSum=-5.952;QD=8.20;ReadPosRankSum=0.130;VQSLOD=0.6774;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.56:0,52,670	0/1:1,3:4:7.42:78,0,7	0/0:17,0:5:8.96:0,9,102	0/0:22,0:9:15.12:0,15,153	0/0:11,1:11:1.35:0,1,61	0/0:21,0:21:63.19:0,63,861	0/0:12,0:11:33.08:0,33,422	0/0:23,0:22:59.95:0,60,676	0/0:4,0:4:5.54:0,6,26	0/0:9,0:9:27.08:0,27,362	0/0:14,0:14:42.13:0,42,569	0/0:2,0:2:2.74:0,3,13	0/0:4,0:4:12.04:0,12,167	0/1:2,0:2:6.78:11,0,7	1/1:5,0:4:6.01:63,6,0	0/0:6,0:6:17.85:0,18,221	1/1:11,2:13:28.24:170,28,0	0/0:14,0:13:38.60:0,39,313	0/0:9,0:9:27.04:0,27,309	0/0:6,0:6:18.05:0,18,224	0/0:3,0:3:9.03:0,9,126	0/0:4,0:4:8.58:0,9,50	0/0:3,0:3:6.02:0,6,84	0/0:7,0:7:21.07:0,21,292	0/0:16,1:17:34.88:0,35,260	0/0:26,0:26:78.24:0,78,1058	0/0:10,0:10:20.86:0,21,216	0/0:11,0:11:33.11:0,33,460
chr10	89369495	.	AT	A	243.25	PASS	AB=0.813;AC=6;AF=0.107;AN=56;BaseQRankSum=5.766;DP=306;FS=0.000;HRun=1;HaplotypeScore=58.9099;InbreedingCoeff=0.4934;MQ=62.30;MQ0=2;MQRankSum=-5.639;QD=8.69;ReadPosRankSum=-0.883;VQSLOD=0.3695;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:47.08:0,47,577	0/1:2,3:5:4.85:102,0,5	0/0:16,0:5:13.95:0,14,113	0/0:22,0:9:16.95:0,17,182	0/0:9,0:8:1.87:0,2,183	0/0:22,0:22:66.20:0,66,881	0/0:12,0:11:33.06:0,33,394	0/0:23,0:23:63.16:0,63,821	0/0:4,0:4:6.02:0,6,79	0/0:9,0:9:27.08:0,27,342	0/0:15,0:15:45.12:0,45,579	0/0:2,0:2:2.90:0,3,16	0/0:4,0:4:12.03:0,12,147	0/1:3,0:3:7.62:8,0,68	1/1:5,0:4:6.01:63,6,0	0/0:6,0:6:18.06:0,18,242	1/1:13,2:15:16.33:193,16,0	0/0:15,0:14:38.97:0,39,468	0/0:9,0:9:27.06:0,27,343	0/0:6,0:6:17.99:0,18,220	0/0:4,0:4:12.02:0,12,146	0/0:4,0:4:8.89:0,9,95	0/0:3,0:3:8.94:0,9,99	0/0:7,0:7:21.05:0,21,268	0/0:18,0:18:50.54:0,51,575	0/0:28,0:28:84.24:0,84,1088	0/0:11,0:11:20.78:0,21,252	0/0:12,0:12:36.10:0,36,471
chr10	89369503	.	AT	A	365.26	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.055;DP=294;FS=1.827;HRun=1;HaplotypeScore=51.6427;InbreedingCoeff=0.7414;MQ=64.23;MQ0=1;MQRankSum=-5.350;QD=12.60;ReadPosRankSum=-0.791;VQSLOD=1.9764;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.12:0,48,629	1/1:4,2:6:14.96:137,15,0	0/0:9,1:4:6:0,6,84	0/0:19,0:9:16.94:0,17,166	0/0:8,0:7:17.97:0,18,223	0/0:23,0:23:69.18:0,69,909	0/0:11,0:10:30.09:0,30,398	0/0:23,0:23:63.16:0,63,844	0/0:4,0:4:9.01:0,9,107	0/0:11,0:11:33.09:0,33,419	0/0:15,0:15:42.14:0,42,583	0/0:2,0:2:2.94:0,3,18	0/0:3,0:3:9.03:0,9,126	0/0:2,0:2:5.97:0,6,61	1/1:2,0:5:6.01:62,6,0	0/0:7,0:7:21:0,21,252	1/1:15,2:17:42.71:297,43,0	0/0:14,0:14:39.08:0,39,505	0/0:10,0:10:27.05:0,27,342	0/0:6,0:6:17.98:0,18,209	0/0:5,0:5:15.03:0,15,191	0/0:3,0:3:6.01:0,6,83	0/0:3,0:3:9.03:0,9,124	0/0:6,0:6:18.06:0,18,250	0/0:16,0:16:44.94:0,45,551	0/0:25,0:25:75.25:0,75,1047	0/0:9,0:9:21.07:0,21,287	0/0:12,0:12:36.12:0,36,501
chr10	89370337	.	T	TG	1112.05	PASS	AB=1.000;AC=31;AF=0.816;AN=38;BaseQRankSum=-2.935;DP=65;FS=13.010;HRun=7;HaplotypeScore=12.9090;InbreedingCoeff=0.2683;MQ=84.15;MQ0=0;MQRankSum=0.921;QD=20.22;ReadPosRankSum=0.750;VQSLOD=1.4056;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:9.03:103,9,0	./.	1/1:3,0:3:8.48:47,8,0	0/1:4,0:4:1.77:7,0,2	./.	1/1:0,3:3:6.02:78,6,0	1/1:2,4:6:6.02:72,6,0	1/1:1,3:4:9.03:123,9,0	./.	1/1:0,4:4:11.71:135,12,0	./.	0/0:2,0:2:1.82:0,2,5	1/1:1,0:1:3.01:41,3,0	./.	1/1:0,0:2:2.97:20,3,0	1/1:1,0:1:3.01:41,3,0	1/1:1,0:4:8.93:63,9,0	./.	1/1:2,3:4:9.02:108,9,0	0/0:1,1:2:0:0,0,0	1/1:3,0:3:6.02:81,6,0	./.	1/1:3,0:3:9.02:107,9,0	1/1:0,4:4:3.01:42,3,0	0/0:1,0:2:1.77:0,2,4	./.	1/1:3,2:5:14.90:127,15,0	./.
chr10	89370341	.	T	TC	157.83	PASS	AB=1.000;AC=9;AF=0.214;AN=42;BaseQRankSum=-0.689;DP=82;FS=9.029;HRun=1;HaplotypeScore=22.4198;InbreedingCoeff=0.4933;MQ=83.04;MQ0=0;MQRankSum=-3.184;QD=8.31;ReadPosRankSum=-1.236;VQSLOD=-0.2943;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:6.58:0,7,33	./.	0/0:3,0:3:9.02:0,9,105	0/0:5,0:5:6.90:0,7,70	./.	0/0:3,0:3:3.26:0,3,10	0/0:7,0:7:9.76:0,10,90	0/1:6,0:6:0.26:0,0,49	./.	0/0:4,0:4:9.68:0,10,55	./.	1/1:2,2:4:6.02:88,6,0	0/0:2,0:2:2.68:0,3,11	1/1:2,0:2:5.98:64,6,0	0/0:2,0:2:3.01:0,3,30	0/0:1,0:1:2.68:0,3,11	0/0:4,0:4:9.02:0,9,88	1/1:4,0:4:6:56,6,0	0/0:5,0:4:11.10:0,11,79	0/0:3,0:3:0:0,0,0	0/0:5,0:5:11.24:0,11,83	./.	0/0:4,0:4:11.37:0,11,87	0/0:4,0:4:2.37:0,2,8	1/1:0,3:3:6.02:67,6,0	./.	0/0:5,0:5:13.68:0,14,75	./.
chr10	89370817	.	T	TG	2060.56	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.689;DP=701;FS=3.356;HRun=1;HaplotypeScore=65.8386;InbreedingCoeff=0.9990;MQ=77.12;MQ0=0;MQRankSum=-3.666;QD=37.46;ReadPosRankSum=3.492;VQSLOD=4.3642;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1401	1/1:0,8:8:24.08:360,24,0	0/0:29,0:26:72.23:0,72,919	0/0:28,0:24:72.23:0,72,917	0/0:21,0:21:60.19:0,60,779	0/0:17,0:17:51.17:0,51,662	0/0:35,0:35:99:0,99,1256	0/0:38,0:38:99:0,114,1480	0/0:34,0:34:99:0,102,1324	0/0:30,0:30:90.29:0,90,1158	0/0:11,0:11:33.11:0,33,428	0/0:29,0:29:84.27:0,84,1091	0/0:21,0:21:57.17:0,57,725	0/0:20,0:20:60.20:0,60,779	1/1:1,18:19:48.16:719,48,0	0/0:19,0:19:57.19:0,57,740	1/1:1,27:28:75.25:1124,75,0	0/0:28,0:28:84.23:0,84,1072	0/0:26,0:26:72.21:0,72,918	0/0:20,0:20:60.20:0,60,779	0/0:56,0:56:99:0,166,2143	0/0:15,0:15:45.12:0,45,556	0/0:13,0:13:39.13:0,39,506	0/0:35,0:35:99:0,102,1291	0/0:23,0:23:69.22:0,69,895	0/0:24,0:24:72.23:0,72,935	0/0:28,0:28:84.26:0,84,1077	0/0:10,0:10:30.10:0,30,389
chr10	89370989	.	T	TA	5998.11	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-12.640;DP=688;FS=1.508;HRun=2;HaplotypeScore=67.4069;InbreedingCoeff=0.9999;MQ=77.31;MQ0=0;MQRankSum=-3.150;QD=35.28;ReadPosRankSum=3.814;VQSLOD=5.4124;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1289	0/0:15,0:15:45.07:0,45,534	0/0:18,0:18:53.57:0,54,559	0/0:16,0:15:38.89:0,39,412	1/1:2,28:30:87.11:1140,87,0	0/0:19,0:19:57.16:0,57,685	0/0:19,0:19:57.12:0,57,654	0/0:34,0:34:99:0,99,1163	1/1:1,23:24:63.21:881,63,0	0/0:34,0:34:99:0,99,1172	0/0:20,0:20:51.14:0,51,607	1/1:0,16:16:36.12:503,36,0	0/0:15,0:15:42.13:0,42,519	1/1:1,21:22:51.17:713,51,0	0/0:17,0:17:51.14:0,51,608	0/0:21,0:21:60.18:0,60,729	0/0:38,0:38:99:0,111,1295	1/1:0,32:32:87.29:1214,87,0	0/0:20,0:20:57.07:0,57,630	0/0:18,0:18:54.12:0,54,626	0/0:37,0:37:99:0,105,1231	1/1:1,19:20:51.04:665,51,0	0/0:15,0:15:42.09:0,42,481	0/0:39,0:39:99:0,114,1310	1/1:0,26:26:63.21:881,63,0	0/0:27,0:27:81.24:0,81,989	0/0:26,0:26:75.05:0,75,887	0/0:30,0:30:90.28:0,90,1111
chr10	89372109	.	A	AAAAAC	10024.24	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-11.146;DP=725;FS=4.422;HRun=0;HaplotypeScore=116.6881;InbreedingCoeff=0.9652;MQ=56.57;MQ0=12;MQRankSum=-1.447;QD=36.72;ReadPosRankSum=-0.430;VQSLOD=4.7090;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:68.37:0,68,1366	1/1:9,7:16:24.08:668,24,0	0/0:34,0:10:12.02:0,12,172	0/0:32,0:13:5.08:0,5,40	1/1:15,13:27:36.12:993,36,0	0/0:22,0:22:39.13:0,39,699	0/0:30,0:30:45.14:0,45,780	0/0:28,0:27:18.06:0,18,323	1/1:13,10:24:27.09:742,27,0	0/0:24,0:24:36.11:0,36,618	0/0:16,0:16:24.08:0,24,430	1/1:8,8:16:18.06:502,18,0	0/0:18,0:18:33.10:0,33,558	1/1:11,16:27:26.95:753,27,0	1/1:11,12:24:30.10:837,30,0	0/0:29,0:29:54.15:0,54,886	1/1:14,17:32:45.15:1255,45,0	1/1:13,19:32:48.16:1340,48,0	0/0:24,0:19:9.03:0,9,161	0/0:21,0:22:36.11:0,36,578	1/1:14,4:18:18.06:500,18,0	1/1:9,20:32:55.43:1432,55,0	0/0:26,0:26:45.15:0,45,774	0/0:35,0:35:48.16:0,48,854	1/1:10,13:24:36.12:1002,36,0	0/0:25,0:25:48.16:0,48,857	0/0:24,0:24:54.17:0,54,938	0/0:19,0:19:39.13:0,39,699
chr10	89372404	.	AGTTCTGT	A	5462.33	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.181;DP=599;FS=0.000;HRun=0;HaplotypeScore=170.4035;InbreedingCoeff=0.9905;MQ=92.34;MQ0=0;MQRankSum=-13.678;QD=45.52;ReadPosRankSum=0.550;VQSLOD=4.2122;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.27:0,90,3259	0/0:13,0:13:39.13:0,39,1377	0/0:31,0:31:77.47:0,77,2619	0/0:29,0:29:57.19:0,57,1773	1/1:4,10:14:17.22:326,17,0	0/0:17,0:17:48.14:0,48,1595	0/0:24,0:24:63.22:0,63,2418	0/0:30,0:30:65.92:0,66,2193	1/1:7,11:18:33.11:804,33,0	0/0:24,0:24:60.21:0,60,2213	0/0:11,0:11:21.07:0,21,806	1/1:6,13:19:39.13:950,39,0	0/0:13,0:13:39.13:0,39,1494	1/1:4,12:16:33.11:768,33,0	0/0:24,0:24:19.20:0,19,543	0/0:22,0:22:51.16:0,51,1802	0/0:22,0:22:12.04:0,12,460	1/1:5,14:19:36.12:877,36,0	0/0:23,0:23:48.16:0,48,1623	0/0:12,0:12:33.09:0,33,1109	0/0:33,0:33:72.25:0,72,2752	1/1:2,15:17:42.10:931,42,0	0/0:15,0:15:39.12:0,39,1385	0/0:44,0:44:99:0,126,4729	1/1:5,12:17:36.12:806,36,0	0/0:27,0:27:60.21:0,60,2138	0/0:21,0:20:50.68:0,51,1925	0/0:12,0:12:33.08:0,33,909
chr10	89372437	.	T	TGC	2184.37	PASS	AB=1.000;AC=25;AF=0.481;AN=52;BaseQRankSum=3.566;DP=573;FS=6.946;HRun=0;HaplotypeScore=138.8326;InbreedingCoeff=0.8513;MQ=63.79;MQ0=13;MQRankSum=-2.478;QD=9.10;ReadPosRankSum=-1.454;VQSLOD=2.8888;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:40.59:0,41,445	1/1:8,0:8:17.92:183,18,0	0/0:25,0:14:29.18:0,29,314	0/0:29,0:17:27.05:0,27,317	./.	0/0:15,0:15:29.98:0,30,280	0/0:29,0:29:77.99:0,78,736	1/1:30,0:30:66.91:538,67,0	1/1:12,0:11:8.63:75,9,0	0/0:24,0:24:62.99:0,63,658	0/0:12,0:12:24:0,24,233	1/1:20,0:19:14.43:100,14,0	0/0:20,0:20:3.50:0,4,140	1/1:15,1:15:2.74:13,3,0	0/1:22,0:21:0.13:0,0,0	0/0:19,0:19:48.09:0,48,570	1/1:21,0:21:2.68:11,3,0	1/1:18,0:16:33.42:211,33,0	1/1:4,9:13:20.23:195,20,0	1/1:10,2:12:31.40:315,31,0	1/1:25,1:26:46.99:327,47,0	1/1:19,0:19:2.09:47,2,0	0/0:16,0:16:36.03:0,36,398	0/0:53,0:52:99:0,113,1470	./.	0/0:21,0:21:59.87:0,60,585	1/1:22,1:22:45.49:368,45,0	0/0:6,0:5:15.03:0,15,191
chr10	89372440	.	G	GCGCACACACA	3210.61	PASS	AB=0.879;AC=26;AF=0.500;AN=52;BaseQRankSum=3.753;DP=626;FS=2.402;HRun=0;HaplotypeScore=228.6454;InbreedingCoeff=0.7521;MQ=59.30;MQ0=14;MQRankSum=-2.327;QD=10.63;ReadPosRankSum=-1.836;VQSLOD=2.3418;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:33:32.88:0,33,446	1/1:8,0:8:20.93:397,21,0	0/0:23,0:12:29.18:0,29,314	0/0:28,0:15:27.05:0,27,317	./.	0/0:15,0:15:35.99:0,36,488	0/0:25,0:29:81.03:0,81,1080	1/1:30,0:30:73.79:552,74,0	1/1:12,0:13:8.63:129,9,0	0/0:22,0:24:64.66:0,65,1054	0/0:11,0:12:26.68:0,27,392	1/1:24,0:24:8.50:190,9,0	0/1:15,0:22:65.51:66,0,147	1/1:18,0:17:5.75:34,6,0	1/1:13,0:29:3.54:139,4,0	0/0:15,0:19:48.11:0,48,1258	1/1:8,18:31:15.05:471,15,0	1/1:17,0:15:38.35:401,38,0	1/1:14,0:14:11.05:159,11,0	0/1:15,0:15:25:154,0,25	1/1:30,0:29:47.17:327,47,0	1/1:24,0:24:3.48:74,3,0	0/0:16,0:16:39.05:0,39,754	0/0:51,0:56:99:0,144,2993	./.	0/0:19,0:23:39.01:0,39,896	1/1:23,0:22:47.47:322,47,0	0/0:6,0:5:15.03:0,15,392
chr10	89372479	.	C	CAG	1565.50	PASS	AB=0.804;AC=14;AF=0.250;AN=56;BaseQRankSum=2.281;DP=635;FS=4.193;HRun=0;HaplotypeScore=146.7981;InbreedingCoeff=0.5061;MQ=56.89;MQ0=19;MQRankSum=-3.504;QD=8.24;ReadPosRankSum=0.624;VQSLOD=3.4349;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:22.35:0,22,314	1/1:6,0:6:3.59:40,4,0	0/0:16,0:7:14.84:0,15,126	0/0:37,0:19:20.09:0,20,195	0/0:19,0:18:11.95:0,12,98	0/0:22,0:22:44.67:0,45,461	0/0:22,0:22:38.81:0,39,548	1/1:29,0:26:0.60:477,1,0	0/0:17,0:16:1.59:0,2,87	0/0:24,0:23:38.24:0,38,597	0/0:15,0:15:38.94:0,39,367	0/0:29,0:28:21.16:0,21,222	0/1:19,0:19:20.75:21,0,62	0/0:15,0:15:4.81:0,5,29	1/1:26,0:23:20.24:167,20,0	0/0:28,0:28:62.95:0,63,724	1/1:27,1:28:34.05:365,34,0	0/0:13,0:11:23.78:0,24,176	1/1:12,1:12:12.22:211,12,0	0/1:6,13:18:15.05:192,0,15	0/1:31,0:28:2.18:124,0,2	0/0:20,0:20:15.44:0,15,124	0/0:14,0:14:38.63:0,39,444	0/0:56,0:55:99:0,127,1609	0/0:25,0:25:11.74:0,12,100	0/0:27,0:26:52.17:0,52,601	0/1:7,11:17:69.22:135,0,69	0/0:11,0:10:24.02:0,24,277
chr10	89372481	.	CAG	C	828.41	PASS	AB=0.974;AC=19;AF=0.339;AN=56;BaseQRankSum=7.503;DP=632;FS=2.263;HRun=0;HaplotypeScore=146.0797;InbreedingCoeff=0.3882;MQ=58.03;MQ0=16;MQRankSum=-0.776;QD=3.38;ReadPosRankSum=-0.445;VQSLOD=2.2932;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,1:32:36.58:37,0,358	0/1:6,0:6:9.81:10,0,55	0/0:18,0:10:18.19:0,18,207	0/0:38,0:20:20.26:0,20,288	1/1:19,0:18:11.98:97,12,0	0/0:22,0:22:41.76:0,42,475	0/0:22,0:22:35.49:0,35,442	0/0:30,0:27:47.55:0,48,519	1/1:16,0:15:14.92:123,15,0	0/0:24,0:23:45.60:0,46,543	0/0:15,0:15:30.43:0,30,369	1/1:27,2:28:0.30:119,0,0	0/1:18,0:19:25.82:26,0,213	0/1:15,0:15:12.45:18,0,12	0/0:25,0:23:20.31:0,20,168	0/0:29,0:29:52.09:0,52,799	0/0:28,0:28:47.65:0,48,385	1/1:13,0:11:20.03:145,20,0	0/1:15,0:13:67.54:68,0,98	0/1:19,1:19:76.10:76,0,96	0/0:29,0:27:21.79:0,22,165	1/1:19,1:20:17.17:144,17,0	0/0:14,0:14:29.93:0,30,469	0/0:57,0:56:90.77:0,91,1580	1/1:23,0:23:11.98:99,12,0	0/0:25,0:24:30.47:0,30,564	0/1:15,1:15:50.63:54,0,51	0/0:10,0:9:23.95:0,24,280
chr10	89372671	.	AC	A	5048.37	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.411;DP=627;FS=3.812;HRun=3;HaplotypeScore=105.2736;InbreedingCoeff=0.9785;MQ=80.38;MQ0=0;MQRankSum=-3.033;QD=37.12;ReadPosRankSum=3.833;VQSLOD=4.5317;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,2043	0/0:7,0:7:18.06:0,18,285	0/0:22,0:22:65.48:0,65,903	0/0:27,0:26:62.83:0,63,944	1/1:0,11:11:30.10:419,30,0	0/0:14,0:14:36.12:0,36,571	0/0:30,0:30:87.30:0,87,1391	0/0:23,0:23:69.24:0,69,1101	1/1:0,29:29:78.26:1085,78,0	0/0:19,0:19:54.17:0,54,827	0/0:8,0:8:21.07:0,21,335	1/1:0,27:27:75.25:1041,75,0	0/0:23,0:23:66.23:0,66,1054	1/1:0,18:18:51.17:706,51,0	0/0:27,0:27:69.22:0,69,1063	0/0:26,0:26:78.21:0,78,1169	0/0:32,0:32:87.28:0,87,1366	1/1:0,11:11:24.08:336,24,0	0/0:23,0:23:69.24:0,69,1095	0/0:17,0:17:45.15:0,45,714	0/0:45,0:45:99:0,135,2117	1/1:1,20:21:51.17:706,51,0	0/0:13,0:13:36.12:0,36,571	0/0:52,0:52:99:0,156,2407	1/1:1,18:19:54.18:755,54,0	0/0:21,0:21:57.19:0,57,890	0/0:16,0:16:45.15:0,45,710	0/0:2,0:2:6.02:0,6,92
chr10	89372694	.	A	AGAG	1126.99	PASS	AB=0.777;AC=4;AF=0.071;AN=56;BaseQRankSum=3.248;DP=669;FS=18.478;HRun=0;HaplotypeScore=166.7513;InbreedingCoeff=-0.0839;MQ=66.78;MQ0=1;MQRankSum=-6.853;QD=13.91;ReadPosRankSum=-1.169;VQSLOD=1.9145;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,118,1987	0/0:4,0:4:8.39:0,8,123	0/0:33,0:22:48.15:0,48,872	0/0:27,0:20:53.91:0,54,935	0/0:16,0:16:21.52:0,22,355	0/0:17,0:17:42.14:0,42,765	0/0:38,0:38:99:0,111,2031	0/1:20,0:23:99:250,0,575	0/0:31,0:31:71.82:0,72,1149	0/0:16,0:16:48.16:0,48,878	0/0:10,0:10:30.10:0,30,533	0/0:27,0:27:67.11:0,67,1064	0/0:22,0:22:66.21:0,66,1135	0/0:22,0:22:57.14:0,57,861	0/0:29,0:29:75.22:0,75,1141	0/0:36,0:36:99:0,105,1868	0/0:32,0:33:51.55:0,52,1328	0/0:12,0:12:30.10:0,30,495	0/1:26,4:30:99:378,0,720	0/1:6,4:10:99:148,0,264	0/0:47,0:47:99:0,136,2204	0/0:22,0:22:41.19:0,41,760	0/0:15,0:15:42.07:0,42,637	0/0:45,0:45:99:0,132,2381	0/0:22,0:22:63.20:0,63,1000	0/0:20,0:20:60.21:0,60,1103	0/1:8,9:17:99:461,0,148	0/0:3,0:3:6.02:0,6,112
chr10	89372713	.	G	GGA	2316.60	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=4.481;DP=673;FS=5.483;HRun=0;HaplotypeScore=140.0444;InbreedingCoeff=0.5082;MQ=64.51;MQ0=2;MQRankSum=-1.755;QD=14.66;ReadPosRankSum=4.062;VQSLOD=3.5630;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,1362	1/1:1,3:4:9.03:154,9,0	0/0:29,0:15:26.38:0,26,324	0/1:33,0:22:4.25:4,0,223	0/0:13,0:13:24.55:0,25,316	0/0:19,0:19:51.17:0,51,669	0/0:37,0:37:93.28:0,93,1203	0/0:25,0:24:36.11:0,36,466	0/0:29,0:29:75.23:0,75,970	0/0:15,0:15:45.13:0,45,569	0/0:11,0:11:30.10:0,30,394	0/0:27,0:27:66.21:0,66,853	0/0:21,0:21:60.17:0,60,761	0/0:25,0:25:75.24:0,75,984	1/1:6,26:32:54.18:925,54,0	0/0:30,0:30:81.26:0,81,1065	1/1:4,28:32:71.83:1178,72,0	0/0:15,0:15:39.10:0,39,481	0/1:28,0:28:27.01:27,0,546	0/1:11,0:11:41.99:44,0,42	0/0:51,0:51:99:0,135,1742	0/0:24,0:24:48.14:0,48,615	0/0:20,0:20:51.16:0,51,662	0/0:37,0:37:84.27:0,84,1100	0/0:23,0:23:63.13:0,63,792	0/0:21,0:21:54.18:0,54,710	0/1:17,0:17:99:141,0,153	0/0:4,0:4:9.03:0,9,118
chr10	89374841	.	A	AGAG	1691.98	PASS	AB=1.000;AC=37;AF=0.740;AN=50;BaseQRankSum=1.260;DP=249;FS=2.719;HRun=0;HaplotypeScore=146.3718;InbreedingCoeff=-0.0348;MQ=33.23;MQ0=9;MQRankSum=0.647;QD=7.23;ReadPosRankSum=2.472;VQSLOD=3.2880;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,4:12:19.52:289,20,0	./.	./.	0/1:3,0:1:0:0,0,0	0/0:7,0:7:1.29:0,1,5	0/1:13,0:12:11.05:16,0,11	0/1:12,0:11:0.94:1,0,41	1/1:10,0:9:5.73:75,6,0	1/1:16,0:16:26.30:270,26,0	1/1:13,0:12:13.09:113,13,0	1/1:8,0:8:0.79:2,1,0	1/1:8,0:8:18.31:160,18,0	0/1:4,0:4:9.35:20,0,9	1/1:19,0:19:8.15:326,8,0	0/1:5,0:5:8.75:41,0,9	0/1:7,0:7:17.27:19,0,17	1/1:5,0:5:12.01:82,12,0	0/1:4,0:4:1.35:54,0,1	1/1:7,0:6:2.29:6,2,0	1/1:3,0:2:5.81:34,6,0	0/1:14,0:12:22.79:23,0,29	0/1:21,0:21:3.28:72,0,3	1/1:14,0:14:2.28:15,2,0	./.	0/1:9,0:9:1.42:28,0,1	0/1:14,0:14:1.97:90,0,2	1/1:7,0:7:5.24:26,5,0	1/1:6,0:6:10.14:50,10,0
chr10	89374859	.	G	GGAA	1099.38	PASS	AB=1.000;AC=21;AF=0.404;AN=52;BaseQRankSum=3.785;DP=376;FS=6.837;HRun=0;HaplotypeScore=148.3815;InbreedingCoeff=-0.3513;MQ=34.87;MQ0=19;MQRankSum=-3.879;QD=3.93;ReadPosRankSum=3.678;VQSLOD=2.1508;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,5:19:36.86:529,37,0	./.	./.	0/0:6,0:2:1.76:0,2,6	0/0:14,0:14:11.70:0,12,88	0/1:15,0:14:17.59:18,0,95	0/0:18,0:17:25.71:0,26,341	0/0:15,0:13:19.25:0,19,126	0/1:21,0:21:49.21:49,0,185	0/0:21,0:20:3.49:0,3,221	0/1:14,0:14:3.52:4,0,63	0/1:11,0:11:35.48:35,0,95	0/1:6,0:6:23.23:23,0,94	0/1:24,0:23:35.38:35,0,210	0/1:8,0:8:16.76:55,0,17	0/1:11,0:10:20.39:20,0,158	0/1:15,0:14:37.99:145,0,38	0/0:6,0:6:15.27:0,15,143	0/1:15,0:13:41.34:45,0,41	1/1:5,0:3:3.48:31,3,0	0/1:19,0:17:47.10:47,0,419	0/1:26,0:26:76.19:76,0,109	0/1:22,0:21:24.88:25,0,68	0/0:7,0:6:8.64:0,9,146	0/1:12,0:12:6.77:7,0,34	0/1:23,0:22:50.39:50,0,112	0/1:8,0:8:12.37:12,0,39	0/1:6,0:6:0.03:42,0,0
chr10	89374877	.	G	GGAA	688.70	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=5.058;DP=421;FS=8.495;HRun=0;HaplotypeScore=166.2894;InbreedingCoeff=0.1777;MQ=55.47;MQ0=13;MQRankSum=-5.835;QD=5.89;ReadPosRankSum=-1.087;VQSLOD=2.1727;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:99:123,0,104	1/1:3,0:3:2.97:20,3,0	0/0:10,0:8:20.99:0,21,208	0/0:14,0:9:14.29:0,14,181	0/1:15,0:15:15.16:15,0,61	0/0:14,0:14:5.40:0,5,142	0/0:19,0:19:23.18:0,23,438	0/0:17,0:15:24.56:0,25,193	0/0:20,0:20:49.77:0,50,333	0/0:24,0:23:39.91:0,40,343	0/0:11,0:11:10.63:0,11,94	0/0:16,0:16:22.16:0,22,223	0/0:6,0:6:9.30:0,9,124	0/0:20,0:19:38.70:0,39,289	0/1:9,0:9:10.45:94,0,10	0/0:10,0:9:16.84:0,17,203	1/1:8,7:15:35.52:547,36,0	0/0:9,0:9:24.29:0,24,175	0/1:16,0:15:11.36:11,0,187	0/1:5,0:4:9.44:9,0,36	0/0:22,0:21:40.74:0,41,579	0/1:31,0:31:12.92:13,0,204	0/0:22,0:21:0.99:0,1,119	0/0:8,0:7:14.66:0,15,191	0/0:14,0:14:17.15:0,17,83	0/0:24,0:23:26.78:0,27,227	0/0:13,0:13:25.42:0,25,149	0/0:11,0:11:16.37:0,16,120
chr10	89375343	.	T	TAAA	1344.37	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=-4.136;DP=274;FS=6.289;HRun=10;HaplotypeScore=43.0232;InbreedingCoeff=0.6558;MQ=55.57;MQ0=15;MQRankSum=-7.419;QD=18.93;ReadPosRankSum=-4.515;VQSLOD=-0.3468;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:18:23.89:0,24,126	0/0:5,0:4:7.42:0,7,51	0/0:8,0:4:8.99:0,9,89	0/0:3,0:2:2.98:0,3,35	0/0:15,0:15:39.10:0,39,474	0/0:10,0:10:27.07:0,27,315	0/1:5,0:4:13.71:14,0,31	1/1:10,10:15:27.08:470,27,0	0/0:7,0:7:15.03:0,15,162	0/0:19,0:18:48.11:0,48,545	0/0:9,0:9:18.06:0,18,219	0/0:3,0:3:9.03:0,9,109	0/0:7,0:6:18.04:0,18,206	0/0:11,0:12:36:0,36,404	0/0:6,0:6:7.97:0,8,38	0/0:6,0:5:12.04:0,12,146	0/0:8,0:8:15.23:0,15,82	0/0:10,0:11:26.96:0,27,274	1/1:1,14:16:37.97:509,38,0	1/1:3,5:9:12.01:163,12,0	0/0:7,0:4:9.02:0,9,109	0/0:3,0:3:9.03:0,9,109	0/0:11,0:10:27.05:0,27,304	0/0:4,0:2:6.02:0,6,73	0/0:8,0:8:19.87:0,20,224	0/0:19,0:19:45.06:0,45,522	1/1:2,7:8:18.06:345,18,0	0/1:11,0:11:0.63:1,0,135
chr10	89375354	.	GA	G	444.93	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=4.695;DP=282;FS=23.908;HRun=10;HaplotypeScore=39.5154;InbreedingCoeff=0.6381;MQ=59.91;MQ0=5;MQRankSum=1.367;QD=10.35;ReadPosRankSum=1.051;VQSLOD=0.6165;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,3:19:51.08:334,51,0	0/1:3,0:3:27.34:28,0,27	0/0:12,0:5:2.89:0,3,83	0/1:4,0:3:2.63:3,0,47	0/0:18,0:18:48.13:0,48,565	0/0:9,0:9:24.07:0,24,290	0/0:3,0:3:9.01:0,9,95	0/0:16,0:15:38.91:0,39,416	0/0:6,0:6:15.04:0,15,172	0/0:21,0:21:60.18:0,60,722	0/0:7,0:7:18.06:0,18,217	0/0:9,0:9:24.06:0,24,277	0/0:9,0:8:24.06:0,24,279	0/0:12,0:12:30.96:0,31,384	1/1:5,0:5:10.83:59,11,0	0/0:4,0:4:12.04:0,12,145	1/1:10,1:11:23.41:166,23,0	0/0:12,0:12:23.79:0,24,233	0/0:18,0:19:39.04:0,39,430	0/0:8,0:8:14.83:0,15,155	0/0:4,0:4:9.03:0,9,109	0/0:3,0:3:9.03:0,9,109	0/0:9,0:9:24.07:0,24,290	0/0:6,0:5:15.05:0,15,181	0/0:9,0:9:23.28:0,23,260	0/0:19,0:19:51.16:0,51,616	0/0:14,0:12:30.08:0,30,339	0/0:10,0:10:29.27:0,29,309
chr10	89375753	.	A	AGT	748.54	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=0.392;DP=447;FS=1.859;HRun=0;HaplotypeScore=86.9605;InbreedingCoeff=0.6662;MQ=52.15;MQ0=19;MQRankSum=0.413;QD=6.34;ReadPosRankSum=1.282;VQSLOD=2.7642;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:0:0,0,0	1/1:3,1:4:3.01:48,3,0	0/0:27,0:10:14.88:0,15,160	0/0:22,0:6:5.85:0,6,51	0/0:21,0:21:17.92:0,18,223	0/0:18,0:18:36.09:0,36,429	0/0:16,0:16:23.73:0,24,288	0/1:19,0:18:0.05:0,0,0	0/0:15,0:15:21.05:0,21,235	0/0:16,0:15:30.08:0,30,354	0/0:18,0:18:36.06:0,36,411	0/0:9,0:9:17.90:0,18,178	0/0:13,0:13:30.05:0,30,339	0/0:12,0:12:15.03:0,15,163	1/1:5,7:11:5.76:93,6,0	0/0:16,0:16:33.09:0,33,389	1/1:19,0:18:42.14:618,42,0	0/0:19,0:19:41.91:0,42,487	0/1:13,0:13:0.75:1,0,10	0/0:21,0:21:11.84:0,12,61	1/1:9,1:8:9.03:124,9,0	0/0:14,0:13:11.99:0,12,141	0/0:12,0:11:24.08:0,24,293	0/0:14,0:14:24.07:0,24,289	0/0:9,0:9:9.03:0,9,109	0/0:31,0:31:59.76:0,60,693	0/1:15,0:15:0.73:1,0,66	0/0:6,0:6:15.03:0,15,169
chr10	89375764	.	GTGTGTA	G	999.74	PASS	AB=0.996;AC=19;AF=0.352;AN=54;BaseQRankSum=2.520;DP=463;FS=7.274;HRun=0;HaplotypeScore=110.3364;InbreedingCoeff=-0.0664;MQ=47.24;MQ0=36;MQRankSum=-0.650;QD=3.86;ReadPosRankSum=-0.491;VQSLOD=1.5061;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:3:3.01:0,3,43	0/1:26,0:9:6.80:7,0,96	0/1:21,0:5:0.82:1,0,24	0/1:17,1:18:14.84:15,0,82	0/1:19,0:18:0.33:0,0,441	0/0:17,0:15:24.48:0,24,374	1/1:17,0:15:36.62:313,37,0	0/1:14,0:14:58.72:59,0,77	0/0:22,0:20:53.67:0,54,683	0/0:19,0:19:35.99:0,36,840	0/1:9,0:9:31.94:90,0,32	0/0:17,0:16:31.31:0,31,606	0/1:11,0:10:20.12:20,0,69	0/0:13,0:10:4.20:0,4,74	0/0:18,0:18:35.53:0,36,555	0/1:17,0:16:46.84:194,0,47	0/1:22,0:21:11.76:12,0,225	1/1:10,0:7:12.36:83,12,0	1/1:22,0:21:6.18:69,6,0	0/1:13,0:10:49.58:50,0,61	0/1:15,0:14:33.17:56,0,33	0/0:14,0:13:24.06:0,24,653	0/0:16,0:15:3.99:0,4,344	0/1:8,0:8:20.18:20,0,38	0/0:28,0:28:40.82:0,41,1016	0/1:17,0:17:30.19:171,0,30	0/0:7,0:7:14.99:0,15,214
chr10	89375768	.	GTA	G	1243.13	PASS	AB=1.000;AC=14;AF=0.259;AN=54;BaseQRankSum=1.173;DP=446;FS=4.949;HRun=0;HaplotypeScore=85.0441;InbreedingCoeff=0.5035;MQ=45.19;MQ0=42;MQRankSum=-2.052;QD=8.18;ReadPosRankSum=-2.047;VQSLOD=2.6123;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:3,0:2:2.22:0,2,7	0/1:23,0:6:6.80:7,0,96	0/1:19,0:4:0.82:1,0,24	0/0:17,0:17:14.92:0,15,119	0/0:17,0:16:29.93:0,30,286	0/0:18,0:15:23.94:0,24,237	1/1:20,0:17:45.23:359,45,0	0/0:12,0:12:8.99:0,9,91	0/0:22,0:20:4.64:0,5,294	0/0:19,0:19:31.68:0,32,395	0/0:9,0:9:1.31:0,1,40	0/0:17,0:15:30.51:0,31,282	0/0:10,0:9:11.53:0,12,83	0/0:13,0:10:3.87:0,4,24	0/1:17,0:17:7.53:8,0,272	1/1:16,0:15:20.17:251,20,0	0/0:20,0:19:11.69:0,12,270	1/1:3,5:5:14.90:123,15,0	1/1:20,3:22:26.87:274,27,0	0/1:11,0:8:11.25:50,0,11	0/0:13,0:12:6.91:0,7,47	0/0:15,0:14:23.64:0,24,317	0/0:17,0:15:3.82:0,4,195	0/0:7,0:7:5.66:0,6,46	0/0:29,0:28:12.56:0,13,568	1/1:14,1:15:35.32:339,35,0	0/0:7,0:6:13.54:0,14,119
chr10	89375774	.	GTGTGTGT	G	346.86	PASS	AB=0.797;AC=7;AF=0.125;AN=56;BaseQRankSum=5.547;DP=447;FS=6.427;HRun=0;HaplotypeScore=115.6993;InbreedingCoeff=0.0131;MQ=44.07;MQ0=46;MQRankSum=-3.740;QD=3.94;ReadPosRankSum=3.022;VQSLOD=1.6952;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:1.55:0,2,4	0/0:3,0:2:3.01:0,3,101	0/0:18,0:3:9.02:0,9,102	0/0:16,0:2:6.02:0,6,73	0/1:7,8:15:42.49:75,0,42	0/0:17,0:16:22.39:0,22,686	0/0:18,0:14:22.48:0,22,486	0/0:19,0:16:48.14:0,48,631	0/1:9,2:11:23.56:82,0,24	0/0:20,0:18:54.18:0,54,1322	0/0:19,0:19:39.12:0,39,1190	0/1:8,0:9:3.13:108,0,3	0/0:17,0:15:39.09:0,39,1020	0/1:8,2:9:3.62:61,0,4	0/0:15,0:11:4.31:0,4,120	0/0:20,0:20:42.14:0,42,953	0/0:15,0:12:31.34:0,31,518	0/1:18,1:19:32.95:33,0,181	0/0:11,0:8:24.08:0,24,352	0/0:23,0:21:24.05:0,24,483	0/0:12,0:9:12.04:0,12,233	0/1:9,6:14:20.55:82,0,21	0/0:16,0:15:24.55:0,25,819	0/0:18,0:16:27.09:0,27,567	0/1:5,3:8:21.68:33,0,22	0/0:28,0:27:81.22:0,81,1778	0/0:16,0:16:40.67:0,41,689	0/0:8,0:6:15.05:0,15,345
chr10	89375805	.	TGAGAGAGAGAGA	T	747.84	PASS	AB=1.000;AC=14;AF=0.280;AN=50;BaseQRankSum=3.475;DP=406;FS=3.626;HRun=0;HaplotypeScore=164.7140;InbreedingCoeff=0.4830;MQ=38.47;MQ0=39;MQRankSum=-4.514;QD=5.89;ReadPosRankSum=-0.019;VQSLOD=2.7851;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:15.43:0,15,733	0/0:9,0:6:13.28:0,13,469	./.	./.	0/0:17,0:17:3.01:0,3,40	0/0:18,0:17:16.77:0,17,682	0/0:19,0:15:12.04:0,12,445	1/1:8,0:6:0.46:1,0,0	0/0:12,0:12:8.57:0,9,81	0/0:20,0:18:30.05:0,30,848	0/0:22,0:22:20.96:0,21,594	0/1:12,0:11:45.84:46,0,58	0/0:15,0:13:21:0,21,425	0/0:17,0:15:1.45:0,1,123	0/1:11,0:8:0:0,0,0	0/0:22,0:21:27.09:0,27,1103	0/0:8,0:5:3.01:0,3,89	0/0:14,0:13:7.90:0,8,120	1/1:5,0:3:6.02:140,6,0	0/1:19,0:17:0.21:0,0,0	0/0:12,0:10:5.89:0,6,303	1/1:22,0:21:1.83:10,2,0	0/0:18,0:18:11.95:0,12,226	0/0:19,0:17:15.03:0,15,492	0/1:13,0:13:0.63:1,0,33	1/1:15,6:20:12.52:444,13,0	1/1:15,0:15:8.68:235,9,0	./.
chr10	89375859	.	AGAGAGG	A	1805.76	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=6.888;DP=598;FS=14.718;HRun=0;HaplotypeScore=166.2904;InbreedingCoeff=0.3132;MQ=39.78;MQ0=27;MQRankSum=-6.156;QD=5.98;ReadPosRankSum=-2.264;VQSLOD=1.3407;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:54.43:0,54,1121	0/0:6,0:6:18.06:0,18,441	0/0:64,0:5:6.47:0,6,70	0/1:91,0:9:16.72:17,0,79	0/0:24,0:24:9:0,9,75	0/0:13,0:13:30.09:0,30,663	0/0:14,0:14:24.04:0,24,592	1/1:11,14:24:45.98:539,46,0	0/1:31,0:27:43.04:43,0,159	0/0:15,0:15:32.98:0,33,634	0/0:12,0:12:24.07:0,24,696	0/1:21,0:21:74.20:171,0,74	0/0:12,0:12:32.77:0,33,908	0/1:26,0:26:36:36,0,128	0/0:8,0:6:12.04:0,12,336	0/0:18,0:18:45.12:0,45,1159	0/0:8,0:7:21.04:0,21,569	0/1:16,0:15:76.88:77,0,109	1/1:14,3:13:15.39:194,15,0	1/1:6,7:12:17.84:257,18,0	0/0:22,0:21:48.13:0,48,1204	0/1:22,0:22:39.90:55,0,40	0/0:10,0:10:26.67:0,27,738	0/0:23,0:23:54.10:0,54,1567	0/1:29,0:28:74.76:113,0,75	0/0:23,0:23:57.18:0,57,1497	1/1:2,9:11:27.02:484,27,0	0/0:2,0:2:3:0,3,25
chr10	89375871	.	G	GAGGA	3944.23	PASS	AB=0.832;AC=9;AF=0.161;AN=56;BaseQRankSum=10.337;DP=584;FS=12.148;HRun=0;HaplotypeScore=151.7507;InbreedingCoeff=-0.0790;MQ=45.04;MQ0=20;MQRankSum=-11.645;QD=20.76;ReadPosRankSum=0.769;VQSLOD=2.9482;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:57.10:0,57,1191	0/0:6,0:6:18.06:0,18,375	0/0:55,0:7:12.50:0,12,183	0/0:77,0:12:12.86:0,13,169	0/0:12,8:22:8.87:0,9,84	0/0:16,0:16:45.15:0,45,896	0/0:12,0:12:33.10:0,33,626	0/1:25,0:24:99:111,0,598	0/1:14,10:26:29.65:860,0,30	0/0:17,0:17:51.14:0,51,920	0/0:14,0:14:36.12:0,36,730	0/1:16,6:25:38.51:665,0,39	0/0:14,0:14:42.13:0,42,792	0/1:20,4:25:7.78:607,0,8	0/0:8,0:7:15.05:0,15,312	0/0:18,0:18:51.18:0,51,1061	0/0:7,0:7:21.07:0,21,440	0/1:14,2:15:1.13:312,0,1	0/1:9,0:7:30.18:30,0,69	0/0:9,0:9:20.95:0,21,231	0/0:23,0:22:57.20:0,57,1171	0/1:10,10:20:29.71:288,0,30	0/0:15,0:15:9.06:0,9,665	0/0:26,0:26:69.24:0,69,1378	0/1:17,13:29:68.01:861,0,68	0/0:25,0:25:69.21:0,69,1335	0/1:12,0:12:99:209,0,126	0/0:4,0:4:9.03:0,9,145
chr10	89375875	.	AGG	A	435.39	PASS	AB=0.978;AC=12;AF=0.214;AN=56;BaseQRankSum=9.466;DP=581;FS=4.611;HRun=3;HaplotypeScore=151.5424;InbreedingCoeff=-0.0746;MQ=47.61;MQ0=15;MQRankSum=-8.043;QD=1.49;ReadPosRankSum=-1.086;VQSLOD=-0.6381;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:63.57:0,64,1009	0/0:6,0:6:18.04:0,18,302	0/1:49,0:11:25.81:26,0,115	0/1:71,0:12:26.76:27,0,48	0/0:18,2:20:7.82:0,8,48	0/0:16,0:16:32.77:0,33,650	0/0:14,0:14:41.92:0,42,699	0/1:23,0:22:48.82:49,0,340	0/0:29,0:29:9.18:0,9,344	0/0:15,1:16:8.47:0,8,597	0/0:13,0:13:33.10:0,33,606	0/1:21,2:24:76.83:77,0,188	0/0:15,0:15:43.94:0,44,726	0/1:24,0:24:64.73:65,0,123	0/0:9,0:8:18.02:0,18,306	0/0:19,0:19:56.73:0,57,906	0/0:8,0:8:24.03:0,24,388	0/1:14,1:14:53.15:53,0,125	1/1:8,0:6:14.49:91,14,0	0/1:11,0:11:3.02:3,0,126	0/0:23,0:23:19.27:0,19,794	0/1:19,1:20:35.81:36,0,52	0/0:15,0:16:30.89:0,31,651	0/0:28,0:28:75.11:0,75,1255	0/1:29,1:29:89.83:90,0,124	0/0:27,0:27:78.21:0,78,1330	0/1:16,0:16:72.14:72,0,100	0/0:4,0:4:9.02:0,9,134
chr10	89375876	.	G	GGA	599.46	PASS	AB=0.883;AC=7;AF=0.125;AN=56;BaseQRankSum=5.343;DP=582;FS=10.299;HRun=0;HaplotypeScore=155.5007;InbreedingCoeff=0.1016;MQ=48.04;MQ0=15;MQRankSum=-5.506;QD=4.05;ReadPosRankSum=-0.871;VQSLOD=2.3180;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:60.19:0,60,896	0/0:6,0:6:18.03:0,18,250	0/0:47,0:11:23.61:0,24,263	0/0:70,0:12:1.69:0,2,102	1/1:15,5:20:6.49:93,6,0	0/0:16,0:16:48.15:0,48,678	0/0:15,0:15:42.14:0,42,625	0/0:23,0:22:56.82:0,57,732	0/1:28,2:29:60.48:60,0,227	0/0:16,0:16:48.13:0,48,679	0/0:13,0:13:33.11:0,33,504	0/1:22,2:24:39.27:39,0,170	0/0:15,0:15:45.15:0,45,675	0/1:20,4:24:99:220,0,181	0/0:10,0:9:18.02:0,18,250	0/0:19,0:19:51.12:0,51,733	0/0:8,0:8:24.08:0,24,354	0/0:14,0:13:26.32:0,26,257	0/0:8,0:6:14.87:0,15,121	0/0:11,0:12:23.96:0,24,273	0/0:24,0:24:57.17:0,57,807	0/1:18,2:20:74.17:74,0,81	0/0:16,0:16:35.72:0,36,529	0/0:29,0:29:69.23:0,69,1043	0/1:22,8:29:92.23:242,0,92	0/0:28,0:28:75.12:0,75,1138	0/0:15,0:15:41.79:0,42,398	0/0:5,0:5:9.03:0,9,136
chr10	89376610	.	AACAC	A	997.50	PASS	AB=0.872;AC=23;AF=0.442;AN=52;BaseQRankSum=2.922;DP=397;FS=15.659;HRun=0;HaplotypeScore=112.3126;InbreedingCoeff=0.5417;MQ=38.74;MQ0=21;MQRankSum=-3.139;QD=5.83;ReadPosRankSum=-2.776;VQSLOD=0.9113;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:11:2.56:0,3,25	0/1:13,0:14:23.53:32,0,24	./.	./.	1/1:11,4:15:9.11:87,9,0	0/0:23,0:23:13.93:0,14,208	0/0:19,0:17:15.67:0,16,294	0/0:14,0:12:5.34:0,5,22	0/0:9,0:8:8.37:0,8,210	0/0:25,0:24:26.79:0,27,395	0/0:9,0:14:20.61:0,21,322	1/1:9,0:10:6.81:49,7,0	0/1:10,0:14:17.62:18,0,166	1/1:6,3:8:9.03:137,9,0	0/0:7,0:7:5.69:0,6,32	1/1:9,5:14:8.26:97,8,0	0/0:11,0:10:2.78:0,3,17	1/1:8,1:9:5.62:58,6,0	1/1:11,0:9:5.22:38,5,0	1/1:12,3:15:13.19:97,13,0	0/0:17,0:17:23.51:0,24,400	1/1:13,1:14:6.02:79,6,0	0/0:23,0:23:20.05:0,20,440	0/1:13,1:13:37.84:38,0,76	1/1:10,3:15:23.50:223,23,0	0/0:19,0:17:23.62:0,24,278	1/1:14,2:15:17.95:229,18,0	0/0:1,0:1:3.01:0,3,35
chr10	89376665	.	G	GA	3590.05	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-5.563;DP=486;FS=18.088;HRun=8;HaplotypeScore=88.9984;InbreedingCoeff=0.9672;MQ=57.30;MQ0=9;MQRankSum=-2.616;QD=25.11;ReadPosRankSum=-1.664;VQSLOD=2.0001;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,16:21:50.90:545,51,0	1/1:1,6:7:18.05:205,18,0	0/0:19,0:10:23.85:0,24,210	0/0:12,0:10:29.96:0,30,259	0/0:17,0:17:45.02:0,45,411	0/0:21,0:21:50.92:0,51,464	0/0:21,0:21:54.02:0,54,490	1/1:3,20:20:54.16:623,54,0	0/0:14,0:14:39.01:0,39,353	0/0:18,0:18:50.96:0,51,452	0/0:17,0:17:39.90:0,40,357	0/0:11,0:11:19.27:0,19,183	0/0:16,0:16:33.02:0,33,301	0/0:12,0:12:30:0,30,268	1/1:2,13:14:33.10:381,33,0	0/0:16,0:15:36.02:0,36,327	1/1:4,14:18:33.24:351,33,0	0/0:15,0:15:36.02:0,36,329	1/1:7,11:18:20.48:454,20,0	1/1:4,15:19:42.12:484,42,0	0/0:27,0:25:59.37:0,59,524	0/0:17,0:17:47.95:0,48,425	0/0:13,0:13:30.01:0,30,274	0/0:19,0:18:41.61:0,42,381	0/0:30,0:30:75.03:0,75,686	0/0:26,0:26:66.02:0,66,603	1/1:3,18:20:48.14:548,48,0	0/0:1,0:1:3:0,3,27
chr10	89376937	.	TA	T	3713.95	PASS	AB=0.918;AC=18;AF=0.321;AN=56;BaseQRankSum=12.678;DP=515;FS=0.000;HRun=11;HaplotypeScore=75.7188;InbreedingCoeff=0.8314;MQ=77.66;MQ0=0;MQRankSum=0.223;QD=15.94;ReadPosRankSum=1.448;VQSLOD=4.3993;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,40:46:90.93:785,91,0	1/1:2,12:15:34.99:277,35,0	0/0:20,1:21:11.18:0,11,251	0/1:21,2:22:16.53:17,0,126	0/0:19,0:19:47.94:0,48,459	0/0:19,0:19:48.12:0,48,511	0/0:14,1:15:14.59:0,15,359	1/1:4,20:25:59.90:493,60,0	0/0:10,0:10:27.06:0,27,281	0/0:11,0:11:27.07:0,27,288	0/0:10,0:11:23.89:0,24,238	0/0:8,1:9:2.56:0,3,231	0/0:13,0:14:38.96:0,39,396	0/0:18,0:18:45.05:0,45,465	1/1:0,12:12:32.96:271,33,0	0/1:10,1:11:0.58:1,0,200	1/1:3,24:28:67.96:548,68,0	0/0:25,1:26:47.54:0,48,711	1/1:6,18:25:26.97:415,27,0	1/1:4,13:17:35.92:294,36,0	0/0:15,0:15:36.09:0,36,384	0/0:14,0:14:36.09:0,36,381	0/0:13,1:14:11.41:0,11,315	0/0:15,0:15:36.08:0,36,377	0/0:17,0:17:36.07:0,36,374	0/0:22,1:23:26.48:0,26,482	1/1:2,29:31:74.89:615,75,0	0/0:9,0:9:21.03:0,21,214
chr10	89377617	.	CT	C	1148.37	PASS	AB=0.822;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.306;DP=488;FS=6.256;HRun=13;HaplotypeScore=80.4390;InbreedingCoeff=0.4269;MQ=65.42;MQ0=10;MQRankSum=3.588;QD=6.42;ReadPosRankSum=4.257;VQSLOD=2.5834;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:38.82:0,39,262	0/0:9,0:9:11.32:0,11,56	0/0:16,0:9:8.83:0,9,40	0/0:16,1:12:1.41:0,1,74	1/1:4,13:16:29.73:214,30,0	0/0:12,1:15:6.11:0,6,183	0/0:29,1:29:50.65:0,51,594	0/0:26,0:25:32.96:0,33,199	1/1:7,13:20:32.58:232,33,0	0/1:12,2:14:13.73:14,0,203	0/0:12,2:16:1.74:0,2,134	1/1:6,8:13:20.88:153,21,0	0/0:5,0:6:11.92:0,12,92	1/1:0,13:13:20.88:153,21,0	0/0:13,0:12:5.02:0,5,87	0/0:12,0:12:33.04:0,33,316	0/1:26,0:26:10.87:11,0,187	1/1:4,21:25:15.32:267,15,0	0/0:26,0:23:27.34:0,27,261	0/0:20,0:18:28.07:0,28,161	0/0:16,0:15:30.92:0,31,287	0/1:8,7:15:37.42:88,0,37	0/1:11,1:10:10.94:11,0,75	0/0:18,2:22:3.48:0,3,312	0/1:10,11:22:41.62:184,0,42	0/0:20,0:19:44.97:0,45,418	0/0:16,0:15:18.16:0,18,116	0/0:11,0:11:21.77:0,22,188
chr10	89378861	.	TCACACACACACACA	T	1067.82	PASS	AB=0.781;AC=5;AF=0.104;AN=48;BaseQRankSum=3.771;DP=450;FS=0.000;HRun=0;HaplotypeScore=187.8682;InbreedingCoeff=0.5326;MQ=51.02;MQ0=7;MQRankSum=-4.718;QD=17.51;ReadPosRankSum=1.134;VQSLOD=2.5829;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:9.03:0,9,359	1/1:3,4:8:9.03:316,9,0	0/0:22,0:14:3.01:0,3,72	0/0:17,0:13:3.01:0,3,44	0/0:12,0:12:12.04:0,12,656	0/0:18,0:18:33.06:0,33,1833	0/0:18,0:24:36.57:0,37,1503	./.	0/0:20,0:20:15.02:0,15,779	0/0:11,0:11:18.06:0,18,1011	0/0:13,0:11:6.02:0,6,345	0/0:19,0:19:24.07:0,24,1162	0/0:15,0:14:30.10:0,30,1772	0/0:18,0:18:18.51:0,19,723	1/1:14,14:27:18.06:669,18,0	0/0:12,0:12:18.06:0,18,1157	0/1:18,7:24:99:200,0,107	0/0:6,0:10:5.14:0,5,363	./.	./.	0/0:30,0:29:33.11:0,33,1518	0/0:9,0:20:17.99:0,18,844	0/0:10,0:10:21.07:0,21,1196	0/0:13,0:23:36.12:0,36,1167	0/0:17,0:22:12.04:0,12,409	0/0:25,0:23:45.15:0,45,2295	./.	0/0:18,0:20:51.18:0,51,2874
chr10	89380415	.	AG	A	1924.04	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.678;DP=782;FS=0.000;HRun=3;HaplotypeScore=75.5831;InbreedingCoeff=0.9978;MQ=89.11;MQ0=0;MQRankSum=-4.220;QD=34.98;ReadPosRankSum=1.287;VQSLOD=4.1543;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,138,1949	0/0:12,0:12:36.12:0,36,518	0/0:24,0:24:69.23:0,69,982	0/0:33,0:33:96.29:0,96,1347	0/0:23,0:23:66.21:0,66,923	1/1:0,23:23:69.22:855,69,0	1/1:0,32:32:96.30:1190,96,0	0/0:23,0:23:69.22:0,69,978	0/0:39,0:39:99:0,117,1664	0/0:34,0:34:96.32:0,96,1375	0/0:22,0:22:57.17:0,57,784	0/0:32,0:32:93.29:0,93,1305	0/0:27,0:27:78.26:0,78,1123	0/0:33,0:33:96.31:0,96,1362	0/0:21,0:21:60.20:0,60,860	0/0:31,0:31:93.31:0,93,1335	0/0:36,0:36:99:0,102,1429	0/0:31,0:31:84.25:0,84,1185	0/0:14,0:14:39.13:0,39,561	0/0:29,0:29:84.26:0,84,1169	0/0:56,0:56:99:0,159,2253	0/0:25,0:25:72.24:0,72,1028	0/0:13,0:13:39.13:0,39,560	0/0:37,0:37:99:0,111,1577	0/0:22,0:22:66.20:0,66,917	0/0:29,0:29:84.27:0,84,1189	0/0:25,0:24:72.22:0,72,1017	0/0:7,0:7:21.07:0,21,302
chr10	89380769	.	CA	C	2331.83	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.236;DP=659;FS=0.000;HRun=1;HaplotypeScore=63.5440;InbreedingCoeff=0.9991;MQ=73.49;MQ0=0;MQRankSum=-1.396;QD=35.87;ReadPosRankSum=3.497;VQSLOD=3.7463;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,156,2357	1/1:0,8:8:24.08:336,24,0	0/0:19,0:19:50.96:0,51,763	0/0:15,0:15:33.78:0,34,583	0/0:34,0:34:99:0,99,1582	0/0:24,0:24:72.25:0,72,1150	0/0:34,0:34:99:0,102,1543	0/0:28,0:28:81.27:0,81,1267	0/0:18,0:18:54.17:0,54,836	0/0:26,0:26:72.16:0,72,1103	0/0:20,0:20:60.19:0,60,937	0/0:16,0:16:48.15:0,48,744	0/0:17,0:17:51.17:0,51,815	0/0:17,0:17:51.14:0,51,767	1/1:0,23:23:66.22:923,66,0	0/0:15,0:15:45.15:0,45,715	1/1:0,34:34:87.29:1216,87,0	0/0:24,0:24:72.25:0,72,1151	0/0:23,0:23:66.23:0,66,1054	0/0:20,0:20:57.17:0,57,878	0/0:56,0:56:99:0,163,2558	0/0:17,0:17:51.17:0,51,808	0/0:12,0:12:36.12:0,36,575	0/0:30,0:30:87.26:0,87,1339	0/0:25,0:25:72.25:0,72,1150	0/0:18,0:18:51.13:0,51,787	0/0:21,0:21:63.19:0,63,967	0/0:13,0:13:39.13:0,39,623
chr10	89382544	.	G	GA	16641.48	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=19.043;DP=699;FS=0.000;HRun=1;HaplotypeScore=92.8334;InbreedingCoeff=0.9993;MQ=88.13;MQ0=0;MQRankSum=-3.805;QD=43.00;ReadPosRankSum=0.904;VQSLOD=4.5802;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,50:50:99:2156,135,0	0/0:7,0:7:21.07:0,21,294	0/0:31,0:31:80.44:0,80,1136	0/0:19,0:19:51.17:0,51,699	1/1:2,16:19:51.10:762,51,0	1/1:1,19:20:51.17:815,51,0	1/1:1,25:26:72.25:1151,72,0	1/1:1,38:39:99:1777,114,0	1/1:0,15:15:39.13:623,39,0	0/0:29,0:29:87.29:0,87,1216	0/0:13,0:13:36.12:0,36,491	1/1:0,29:29:87.30:1387,87,0	0/0:19,0:19:54.16:0,54,729	1/1:0,23:23:63.21:1005,63,0	0/0:35,0:35:99:0,105,1465	0/0:34,0:34:99:0,102,1407	0/0:33,0:33:99:0,99,1382	1/1:1,11:12:30.10:471,30,0	1/1:0,14:14:39.11:580,39,0	1/1:0,17:17:51.17:815,51,0	1/1:0,34:34:87.21:1352,87,0	1/1:0,27:27:78.18:1216,78,0	0/0:12,0:12:33.10:0,33,443	0/0:39,0:39:99:0,111,1512	1/1:0,22:22:54.18:863,54,0	0/0:29,0:29:87.28:0,87,1199	1/1:2,38:39:99:1668,105,0	0/0:12,0:12:36.10:0,36,485
chr10	89383202	.	GTTTT	G	4508.33	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=11.199;DP=600;FS=12.487;HRun=6;HaplotypeScore=140.9920;InbreedingCoeff=0.9867;MQ=71.89;MQ0=4;MQRankSum=-10.296;QD=28.90;ReadPosRankSum=4.483;VQSLOD=1.3093;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:59.97:0,60,783	0/0:10,0:10:30.09:0,30,705	0/0:22,0:19:52.77:0,53,765	0/0:22,0:15:29.11:0,29,358	1/1:0,14:14:38.53:408,39,0	1/1:0,22:23:45.15:736,45,0	1/1:1,9:9:15.05:250,15,0	0/0:26,0:25:69.18:0,69,1071	1/1:1,19:20:42.14:727,42,0	0/0:25,0:25:75.17:0,75,1685	0/0:23,0:23:66.21:0,66,1624	1/1:2,15:17:27.09:461,27,0	0/0:21,0:21:60.17:0,60,1367	1/1:1,11:12:12.04:193,12,0	0/0:33,0:33:99:0,99,2144	0/0:21,0:21:63.20:0,63,1540	0/0:34,0:34:99:0,99,2305	1/1:0,13:13:18.06:321,18,0	0/0:16,0:16:39.11:0,39,625	0/0:41,0:40:99:0,111,1736	1/1:0,9:9:11.95:173,12,0	1/1:0,23:22:59.65:764,60,0	0/0:15,0:15:45.15:0,45,1191	0/0:34,0:34:96.27:0,96,2329	1/1:0,15:15:30.10:475,30,0	0/0:28,0:28:84.25:0,84,2009	0/0:18,0:18:33.10:0,33,617	0/0:28,0:28:84.15:0,84,1482
chr10	89383205	.	T	TTTTG	5015.02	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-8.860;DP=619;FS=13.206;HRun=0;HaplotypeScore=144.2215;InbreedingCoeff=0.9333;MQ=69.92;MQ0=4;MQRankSum=0.003;QD=33.43;ReadPosRankSum=-6.043;VQSLOD=2.0696;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,1:33:42.14:728,42,0	0/0:10,0:10:24.07:0,24,374	0/0:23,0:20:12.35:0,12,227	0/0:22,0:14:5.90:0,6,43	0/0:14,0:14:15.15:0,15,113	0/0:23,0:23:38.08:0,38,275	0/0:10,0:9:11.14:0,11,72	1/1:11,18:37:78.17:1415,78,0	0/0:19,0:19:34.76:0,35,208	0/0:25,0:25:51.17:0,51,840	0/0:23,0:23:57.17:0,57,894	0/0:15,0:15:23.11:0,23,145	0/0:21,0:21:45.13:0,45,688	0/0:11,0:11:11.95:0,12,101	0/0:33,0:33:66.22:0,66,1067	0/0:21,0:21:51.10:0,51,782	0/0:34,0:34:75.24:0,75,1207	0/0:13,0:13:17.71:0,18,134	1/1:5,8:17:36.08:747,36,0	1/1:15,25:40:63.21:1426,63,0	0/0:9,0:9:8.66:0,9,49	0/0:23,0:22:29.84:0,30,237	0/0:15,0:15:42.14:0,42,689	0/0:34,0:34:84.19:0,84,1299	0/0:15,0:15:24.68:0,25,187	0/0:28,0:28:66.22:0,66,1067	1/1:3,14:21:30.10:699,30,0	0/0:28,0:28:39.12:0,39,620
chr10	89383209	.	GTTTGTTTGTTTGTTTTTGTTT	G	6255.86	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=10.187;DP=615;FS=7.437;HRun=0;HaplotypeScore=327.1902;InbreedingCoeff=0.8644;MQ=67.55;MQ0=4;MQRankSum=-9.405;QD=41.99;ReadPosRankSum=3.649;VQSLOD=2.5506;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:48.16:0,48,2964	0/0:11,0:11:27.08:0,27,1866	0/0:22,0:19:15.52:0,16,636	0/0:22,0:12:3.01:0,3,284	1/1:11,3:14:9.03:468,9,0	1/1:14,7:22:24.08:1254,24,0	1/1:9,1:9:3.01:156,3,0	0/0:41,0:40:80.26:0,80,5204	1/1:14,5:19:15.05:782,15,0	0/0:23,0:23:48.16:0,48,3984	0/0:23,0:23:54.19:0,54,4369	1/1:11,4:15:12.04:627,12,0	0/0:23,0:23:42.14:0,42,3863	1/1:7,3:10:9.03:471,9,0	0/0:30,0:30:66.21:0,66,4729	0/0:20,0:20:42.14:0,42,3246	0/0:32,0:32:36.53:0,37,5958	1/1:12,1:13:3.01:158,3,0	0/0:18,0:18:36.59:0,37,2373	0/0:38,0:37:61.09:0,61,5125	1/1:8,1:9:2.92:156,3,0	1/1:14,9:22:24.08:1247,24,0	0/0:17,0:17:48.14:0,48,3560	0/0:35,0:35:75.26:0,75,6946	1/1:8,6:14:18.06:938,18,0	0/0:29,0:29:72.23:0,72,6012	0/0:22,0:22:34:0,34,3006	0/0:27,0:27:33.11:0,33,2727
chr10	89384535	.	AG	A	1267.53	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.517;DP=417;FS=1.331;HRun=4;HaplotypeScore=45.7309;InbreedingCoeff=0.9082;MQ=84.54;MQ0=0;MQRankSum=-4.027;QD=29.48;ReadPosRankSum=3.085;VQSLOD=3.4802;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.21:0,63,877	1/1:1,3:4:9.03:108,9,0	0/0:21,0:21:59.66:0,60,763	0/0:12,0:12:29.30:0,29,354	0/0:12,0:12:33.11:0,33,461	0/0:12,0:12:36.12:0,36,501	0/0:20,0:20:60.14:0,60,782	0/0:16,0:16:45.13:0,45,597	0/0:12,0:12:36.12:0,36,504	0/0:8,0:8:24.08:0,24,336	0/0:5,0:5:15.05:0,15,210	0/0:20,0:20:57.19:0,57,790	0/0:19,0:19:57.17:0,57,778	0/0:12,0:12:36.12:0,36,504	1/1:0,7:7:21.06:252,21,0	0/0:16,0:16:48.16:0,48,672	1/1:1,31:32:87.27:1044,87,0	0/0:16,0:16:48.11:0,48,631	0/0:12,0:12:33.10:0,33,446	0/0:2,0:2:3.01:0,3,42	0/0:47,0:47:99:0,129,1786	0/0:10,0:10:24:0,24,294	0/0:8,0:7:18.06:0,18,252	0/0:15,0:15:45.15:0,45,630	0/0:10,0:10:27.09:0,27,378	0/0:24,0:24:72.24:0,72,998	0/0:12,0:12:36.10:0,36,486	0/0:12,0:12:36.12:0,36,503
chr10	89384909	.	GCACACACA	G	459.39	PASS	AC=6;AF=0.130;AN=46;BaseQRankSum=3.302;DP=513;FS=17.930;HRun=0;HaplotypeScore=113.3638;InbreedingCoeff=0.6010;MQ=64.65;MQ0=30;MQRankSum=-4.474;QD=12.09;ReadPosRankSum=0.322;VQSLOD=1.1771;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:8.12:0,8,544	1/1:2,0:3:3.01:56,3,0	./.	./.	./.	./.	0/0:43,0:38:16.39:0,16,518	0/0:16,0:16:7.84:0,8,206	0/0:15,0:14:6.02:0,6,202	0/0:19,0:23:31.92:0,32,721	0/0:11,0:11:12.04:0,12,438	0/0:14,0:12:3.01:0,3,102	0/0:15,0:15:22.13:0,22,712	0/0:20,0:18:5.21:0,5,194	1/1:8,4:14:12.04:261,12,0	0/0:25,0:25:39.12:0,39,955	1/1:17,3:21:14.91:262,15,0	0/0:23,0:20:21.07:0,21,629	./.	0/0:5,0:5:3.01:0,3,43	0/0:43,0:37:9.03:0,9,286	0/0:16,0:15:8.33:0,8,185	0/0:14,0:14:15.05:0,15,531	0/0:22,0:23:27.08:0,27,864	0/0:9,0:9:3.01:0,3,56	0/0:8,0:9:22.89:0,23,599	0/0:16,0:18:30.53:0,31,954	0/0:5,0:6:12.04:0,12,394
chr10	89384913	.	A	ACACACACAC	1604.84	PASS	AB=0.908;AC=14;AF=0.259;AN=54;BaseQRankSum=0.839;DP=551;FS=0.740;HRun=0;HaplotypeScore=148.8631;InbreedingCoeff=0.4855;MQ=60.49;MQ0=30;MQRankSum=-3.974;QD=7.91;ReadPosRankSum=-1.646;VQSLOD=2.4223;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:50:58.99:0,59,693	0/0:3,0:3:9.03:0,9,137	0/0:25,0:17:34.95:0,35,425	0/0:30,0:19:39.11:0,39,476	./.	1/1:10,0:7:2.97:20,3,0	0/1:44,0:39:26.54:190,0,27	0/0:20,0:20:51.12:0,51,505	1/1:8,7:16:12.04:315,12,0	0/0:23,0:23:45.31:0,45,572	0/0:12,0:12:18.06:0,18,277	0/1:8,8:15:16.46:139,0,16	0/0:18,0:18:39.31:0,39,629	1/1:10,11:21:5.31:224,5,0	0/0:14,0:14:27.09:0,27,431	0/0:27,0:26:51.93:0,52,688	0/0:21,0:21:38.92:0,39,561	1/1:20,0:20:20.28:593,20,0	0/0:7,0:7:3.46:0,3,25	0/0:7,0:7:6.02:0,6,76	0/1:42,0:37:26.28:192,0,26	0/1:16,0:15:1.70:75,0,2	0/0:16,0:16:24.08:0,24,355	0/0:29,0:28:60.20:0,60,969	1/1:8,0:10:0.63:16,1,0	0/0:14,0:14:31.36:0,31,342	0/0:18,0:18:33.70:0,34,471	0/0:6,0:6:15.05:0,15,233
chr10	89384919	.	A	ACAC	387.35	PASS	AB=0.933;AC=11;AF=0.196;AN=56;BaseQRankSum=4.315;DP=558;FS=3.043;HRun=0;HaplotypeScore=102.0069;InbreedingCoeff=0.2384;MQ=55.79;MQ0=32;MQRankSum=-1.288;QD=1.97;ReadPosRankSum=3.396;VQSLOD=1.8385;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:52.85:0,53,686	0/0:3,0:3:9.02:0,9,102	0/0:25,0:16:34.35:0,34,422	0/0:27,0:16:39.11:0,39,476	0/0:9,0:9:3:0,3,25	1/1:10,0:7:2.97:20,3,0	0/1:45,0:41:55.08:55,0,167	0/0:21,0:21:59.21:0,59,711	0/1:13,0:12:29.11:79,0,29	0/0:24,0:24:55.99:0,56,682	0/0:11,0:11:21.05:0,21,266	0/1:19,0:17:29.79:30,0,129	0/0:20,0:20:48.98:0,49,630	1/1:19,0:17:6:90,6,0	0/0:16,0:16:14.69:0,15,279	0/0:23,0:22:57.04:0,57,692	0/0:21,0:21:39.04:0,39,432	0/1:14,12:23:99:121,0,229	0/0:7,0:7:12.49:0,12,136	0/0:5,0:5:12.04:0,12,153	0/1:49,0:41:87.04:87,0,250	1/1:15,0:14:2.93:49,3,0	0/0:16,0:16:33.11:0,33,430	0/0:29,0:28:66.63:0,67,840	0/0:12,0:12:6.02:0,6,75	0/0:17,0:16:40.73:0,41,532	0/0:18,0:18:19.76:0,20,469	0/0:7,0:7:14.04:0,14,188
chr10	89385747	.	C	CA	2835.89	PASS	AB=0.801;AC=15;AF=0.268;AN=56;BaseQRankSum=-2.895;DP=609;FS=7.817;HRun=10;HaplotypeScore=74.1942;InbreedingCoeff=0.7824;MQ=78.85;MQ0=3;MQRankSum=-1.135;QD=16.02;ReadPosRankSum=-0.633;VQSLOD=3.5392;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,2:43:43.99:0,44,742	0/1:1,8:9:0.58:200,0,1	0/0:27,0:22:7.46:0,7,210	0/1:23,0:17:0.75:1,0,140	0/0:23,0:24:64.56:0,65,501	0/0:17,1:18:21:0,21,368	0/0:21,1:22:24.92:0,25,411	1/1:4,15:20:45.39:447,45,0	0/0:20,0:20:47.90:0,48,391	0/0:21,0:21:53.91:0,54,441	0/0:26,0:26:65.85:0,66,537	0/0:11,0:11:29.95:0,30,246	0/1:12,2:14:31.01:31,0,188	0/0:15,0:15:38.89:0,39,315	1/1:6,22:28:10.77:609,11,0	0/0:12,0:13:34.96:0,35,272	1/1:7,24:34:74.69:747,75,0	0/0:35,0:35:98.87:0,99,813	1/1:2,12:14:14.43:349,14,0	1/1:4,6:10:15:148,15,0	0/0:18,0:18:41.74:0,42,345	0/0:23,0:23:36.31:0,36,458	0/0:23,0:23:25.02:0,25,365	0/0:34,0:34:79.41:0,79,644	0/0:19,0:20:43.96:0,44,351	0/0:23,1:23:21.92:0,22,387	1/1:6,18:24:50.74:492,51,0	0/0:12,0:14:36.19:0,36,281
chr10	89387343	.	G	GA	1459.23	PASS	AB=0.684;AC=15;AF=0.268;AN=56;BaseQRankSum=-5.396;DP=521;FS=11.805;HRun=13;HaplotypeScore=80.0227;InbreedingCoeff=0.2665;MQ=76.18;MQ0=1;MQRankSum=0.446;QD=7.89;ReadPosRankSum=-1.000;VQSLOD=1.1915;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:45:43.93:0,44,212	0/0:11,0:11:8.62:0,9,111	0/0:16,0:12:5.04:0,5,38	0/0:15,0:15:5.25:0,5,56	0/1:7,9:17:59.30:137,0,59	0/1:4,11:15:5.57:96,0,6	0/1:4,11:17:6.12:252,0,6	0/0:11,0:27:33.93:0,34,109	0/1:5,9:14:2.56:121,0,3	0/0:21,0:22:28.56:0,29,190	0/1:13,3:16:2.11:2,0,124	1/1:1,9:10:21.01:191,21,0	0/0:8,0:8:5.82:0,6,41	0/1:6,11:18:14.30:151,0,14	0/0:25,0:25:50.53:0,51,349	0/0:10,0:10:20.77:0,21,144	0/0:29,0:32:71.37:0,71,469	1/1:4,17:21:27.47:397,27,0	0/0:4,1:25:11.09:0,11,77	0/0:6,0:24:34.72:0,35,111	1/1:2,11:13:15.02:139,15,0	0/1:8,5:13:8.62:63,0,9	0/0:16,1:17:17.62:0,18,123	0/0:25,0:29:64.60:0,65,414	0/1:5,11:16:23.88:70,0,24	0/1:13,0:15:6.04:6,0,92	0/0:3,0:22:34.38:0,34,100	0/0:7,0:7:14.81:0,15,102
chr10	89388654	.	C	CGTTTT	814.71	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=-0.756;DP=560;FS=10.253;HRun=0;HaplotypeScore=124.8717;InbreedingCoeff=0.4711;MQ=60.38;MQ0=0;MQRankSum=-2.333;QD=12.93;ReadPosRankSum=-5.231;VQSLOD=0.4164;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:16:29.57:895,30,0	0/0:10,0:10:27.08:0,27,583	0/0:15,0:14:33.11:0,33,682	0/0:20,0:17:51.11:0,51,935	0/0:24,0:24:54.53:0,55,679	0/1:27,0:27:24.40:24,0,726	0/0:18,0:18:12.13:0,12,536	0/0:32,0:32:8.46:0,8,707	0/0:24,0:24:60.75:0,61,833	0/0:25,0:25:72.22:0,72,1421	0/0:16,0:16:48.14:0,48,991	0/0:17,0:17:35.20:0,35,519	0/0:23,0:23:69.22:0,69,1466	0/0:17,0:17:22.50:0,22,506	0/0:21,0:21:60.19:0,60,1215	0/0:23,0:22:69.15:0,69,1390	0/0:15,0:15:45.14:0,45,912	0/0:31,0:31:66.09:0,66,1049	0/1:20,0:20:0.29:0,0,376	0/0:19,0:19:43.33:0,43,533	0/0:24,0:24:44.21:0,44,857	0/0:19,0:19:48.14:0,48,663	0/0:16,0:16:48.15:0,48,1035	0/0:20,0:21:48.13:0,48,1000	0/0:12,0:12:5.55:0,6,339	0/0:23,0:23:69.24:0,69,1550	0/0:23,0:23:20.86:0,21,520	0/0:9,0:9:27.08:0,27,582
chr10	89389055	.	T	TTCTTCC	4293.58	PASS	AB=0.979;AC=17;AF=0.304;AN=56;BaseQRankSum=12.580;DP=658;FS=44.011;HRun=0;HaplotypeScore=267.5190;InbreedingCoeff=-0.4547;MQ=47.75;MQ0=11;MQRankSum=-8.202;QD=10.84;ReadPosRankSum=-0.494;VQSLOD=2.7666;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:62.44:0,62,1562	0/0:9,0:9:17.94:0,18,302	0/0:39,0:14:36.37:0,36,631	0/0:59,0:24:44.35:0,44,539	0/1:25,0:25:99:350,0,467	0/1:19,0:19:99:286,0,241	0/1:24,0:24:99:183,0,335	0/1:26,0:21:31.30:31,0,464	0/1:19,0:19:99:252,0,516	0/1:35,0:35:99:395,0,1221	0/1:20,0:19:40.21:40,0,377	0/1:14,2:16:99:261,0,368	0/1:19,0:19:35.87:36,0,737	0/1:20,0:20:99:203,0,658	0/0:18,0:17:7.64:0,8,643	0/0:16,0:16:31.15:0,31,712	0/0:16,0:16:24.19:0,24,572	0/0:23,0:22:26.97:0,27,1019	0/0:10,0:10:4.42:0,4,399	0/1:34,0:34:99:419,0,591	0/0:11,0:11:11.62:0,12,284	0/1:24,11:36:99:802,0,732	0/1:23,0:23:99:294,0,263	0/0:25,0:25:21.65:0,22,435	0/1:29,0:29:99:240,0,494	0/1:28,0:28:99:235,0,821	0/1:18,0:18:99:231,0,391	0/1:5,0:5:33.83:34,0,80
chr10	89389061	.	CTCT	C	1342.32	PASS	AB=0.930;AC=18;AF=0.321;AN=56;BaseQRankSum=10.821;DP=682;FS=63.214;HRun=0;HaplotypeScore=207.6705;InbreedingCoeff=-0.4589;MQ=48.14;MQ0=12;MQRankSum=-6.545;QD=3.44;ReadPosRankSum=0.380;VQSLOD=0.3054;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:51.80:0,52,1663	0/1:8,2:10:54.55:55,0,280	0/0:49,1:19:34.20:0,34,792	0/0:66,0:26:40.85:0,41,717	0/1:23,0:23:17.39:17,0,587	0/1:17,1:18:77.47:77,0,318	0/1:14,8:22:99:151,0,491	0/0:25,0:20:20.23:0,20,670	0/1:16,0:17:68.94:69,0,580	0/1:36,0:36:8.95:9,0,1574	0/1:19,1:19:76.65:77,0,393	0/1:12,3:15:95.37:95,0,438	0/1:17,2:19:83.15:83,0,694	0/1:22,1:23:23.28:23,0,872	0/1:18,0:17:26.97:27,0,748	0/0:16,0:16:24.44:0,24,817	0/1:15,1:16:14.77:15,0,606	0/1:19,1:20:2.49:2,0,1108	0/0:10,0:10:30.07:0,30,640	0/1:33,1:34:99:182,0,728	0/0:12,0:12:17.98:0,18,356	0/0:38,2:40:29:0,29,1124	0/1:22,1:23:59.14:59,0,303	0/0:26,0:26:36:0,36,625	0/1:23,6:30:99:386,0,524	0/1:26,1:27:99:140,0,932	0/1:17,1:18:31.83:32,0,495	0/0:4,0:4:8.86:0,9,150
chr10	89390172	.	CA	C	9147.03	PASS	AB=0.512;AC=51;AF=0.911;AN=56;BaseQRankSum=-6.228;DP=580;FS=1.829;HRun=2;HaplotypeScore=166.4901;InbreedingCoeff=0.4791;MQ=41.21;MQ0=0;MQRankSum=-1.167;QD=15.83;ReadPosRankSum=3.016;VQSLOD=5.1326;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:19.72:243,20,0	1/1:0,12:12:18.05:217,18,0	0/0:1,0:1:2.99:0,3,24	0/0:1,0:1:3.01:0,3,31	0/1:1,20:21:1.31:33,0,1	1/1:0,19:19:27.08:321,27,0	1/1:2,31:33:40.77:569,41,0	1/1:1,30:31:87.28:1126,87,0	1/1:0,25:25:45.08:525,45,0	1/1:0,32:32:73.57:973,74,0	1/1:0,18:18:10.19:139,10,0	1/1:0,32:32:31.32:399,31,0	1/1:0,26:26:30.08:353,30,0	1/1:0,32:32:20.61:286,21,0	1/1:0,23:23:17.17:239,17,0	1/1:0,20:20:33.10:386,33,0	1/1:0,21:21:23.76:294,24,0	1/1:0,8:8:21.07:266,21,0	1/1:1,16:17:36.10:449,36,0	1/1:0,24:24:14.55:227,15,0	1/1:1,27:28:19.45:347,19,0	1/1:1,22:23:13.32:171,13,0	1/1:0,15:15:6.71:95,7,0	1/1:1,14:15:2.59:34,3,0	1/1:1,20:21:17.64:211,18,0	1/1:0,36:36:71.84:1056,72,0	1/1:1,16:17:7.18:110,7,0	1/1:0,6:6:6.02:78,6,0
chr10	89391671	.	TCCC	T	4063.21	PASS	AB=0.547;AC=22;AF=0.393;AN=56;BaseQRankSum=-5.516;DP=386;FS=1.052;HRun=11;HaplotypeScore=81.4401;InbreedingCoeff=0.7912;MQ=78.69;MQ0=0;MQRankSum=-1.144;QD=19.63;ReadPosRankSum=4.490;VQSLOD=2.0076;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:5,1:29:12.75:13,0,25	0/0:1,0:4:5.06:0,5,45	0/0:10,0:9:18.89:0,19,277	0/0:21,0:17:36.92:0,37,425	1/1:3,14:17:30.09:394,30,0	1/1:2,8:10:24.06:306,24,0	1/1:4,15:19:36.10:473,36,0	0/0:8,0:27:34.94:0,35,153	1/1:5,13:18:21.78:454,22,0	0/0:10,0:11:30.06:0,30,488	0/0:4,0:5:10.28:0,10,166	1/1:1,9:10:18.05:236,18,0	0/0:7,0:10:21.05:0,21,355	1/1:0,13:13:33.11:433,33,0	0/0:2,0:15:35.87:0,36,280	0/0:6,0:6:15.05:0,15,288	0/0:2,0:18:47.84:0,48,386	1/1:1,17:18:45.14:584,45,0	0/0:1,0:11:12.77:0,13,28	0/0:2,0:4:2.49:0,2,5	1/1:7,22:29:45.52:572,46,0	1/1:1,10:12:22.68:313,23,0	0/0:5,0:5:12.04:0,12,242	0/0:12,0:12:27.09:0,27,510	1/1:1,8:9:18.06:236,18,0	0/0:11,0:12:17.77:0,18,299	0/1:4,2:23:39.86:49,0,40	0/0:6,0:6:15.05:0,15,285
chr10	89391680	.	CCCA	C	1413.33	PASS	AB=0.968;AC=14;AF=0.250;AN=56;BaseQRankSum=3.117;DP=386;FS=4.514;HRun=0;HaplotypeScore=88.4355;InbreedingCoeff=0.3915;MQ=84.97;MQ0=0;MQRankSum=-0.887;QD=9.30;ReadPosRankSum=7.246;VQSLOD=1.6181;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:42.44:0,42,199	0/0:4,0:4:6.58:0,7,64	0/0:14,0:12:26.95:0,27,329	0/0:24,0:20:37.67:0,38,408	0/1:16,0:16:9.55:120,0,10	0/1:11,1:12:22.52:140,0,23	0/1:17,0:17:11.77:183,0,12	0/0:21,0:21:9.27:0,9,157	1/1:15,1:16:9.64:191,10,0	0/0:11,0:11:26.88:0,27,515	0/0:5,0:5:11.61:0,12,168	0/1:10,1:11:20.21:80,0,20	0/0:9,0:9:21.05:0,21,384	1/1:13,0:13:31.75:220,32,0	0/0:14,0:14:36.07:0,36,369	0/0:6,0:6:18.05:0,18,356	0/0:21,0:21:60.07:0,60,602	1/1:17,1:18:42.93:265,43,0	0/0:12,0:12:9.77:0,10,119	0/0:3,0:3:8.19:0,8,44	0/1:27,1:28:71.36:165,0,71	1/1:11,0:11:15.60:120,16,0	0/0:8,0:8:23.84:0,24,354	0/0:16,0:16:45.04:0,45,649	0/1:10,0:10:26.16:105,0,26	0/0:13,0:13:35.52:0,36,452	0/0:22,0:22:18.83:0,19,171	0/0:5,0:5:15.04:0,15,300
chr10	89393672	.	CGTGTGTGTGT	C	5002.93	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=6.869;DP=592;FS=0.487;HRun=0;HaplotypeScore=222.1861;InbreedingCoeff=0.9434;MQ=53.66;MQ0=10;MQRankSum=-4.532;QD=22.33;ReadPosRankSum=-1.104;VQSLOD=4.0563;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:31:12.01:187,12,0	0/0:10,0:10:24.70:0,25,270	0/0:25,0:11:6.01:0,6,61	0/0:31,0:16:8.92:0,9,72	1/1:12,4:17:27.47:415,27,0	1/1:8,6:15:27.05:556,27,0	1/1:17,0:17:14.79:150,15,0	0/0:15,0:15:22.89:0,23,198	1/1:11,11:23:50.86:1109,51,0	0/0:23,0:22:52.71:0,53,1241	0/0:8,0:9:12.03:0,12,393	1/1:8,3:11:14.90:221,15,0	0/0:18,0:21:51.15:0,51,1889	1/1:11,6:18:33.06:729,33,0	0/0:25,0:30:62.63:0,63,1115	0/0:12,0:14:18.06:0,18,556	0/0:27,0:35:88.44:0,88,1711	1/1:17,4:22:12.98:528,13,0	0/0:25,0:25:42:0,42,603	0/0:13,0:13:24.79:0,25,335	1/1:27,1:27:11.80:92,12,0	1/1:12,6:19:9.03:214,9,0	0/0:18,0:18:24.05:0,24,489	0/0:32,0:34:81.24:0,81,2803	1/1:12,10:23:39.02:802,39,0	0/0:30,0:30:50.98:0,51,1454	0/0:15,0:17:35.71:0,36,724	0/0:13,0:13:23.83:0,24,412
chr10	89393700	.	TGC	T	2210.46	PASS	AB=0.975;AC=35;AF=0.625;AN=56;BaseQRankSum=10.774;DP=559;FS=0.853;HRun=0;HaplotypeScore=162.3158;InbreedingCoeff=0.1322;MQ=47.33;MQ0=10;MQRankSum=-2.466;QD=4.78;ReadPosRankSum=-0.779;VQSLOD=3.0031;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:41:33.24:33,0,39	1/1:8,1:9:10.55:105,11,0	0/1:15,0:2:9.01:9,0,18	0/1:27,0:2:7.91:15,0,8	1/1:15,0:15:23.53:154,24,0	1/1:18,0:18:22.82:128,23,0	1/1:20,0:20:14.17:80,14,0	0/1:17,0:16:31.60:116,0,32	1/1:23,0:23:51.78:289,52,0	0/1:21,0:20:27.61:28,0,251	0/0:8,0:8:5.06:0,5,138	1/1:7,0:7:11.64:68,12,0	0/0:25,0:25:24.39:0,24,651	1/1:20,0:20:34.61:196,35,0	0/1:24,2:25:6.74:72,0,7	0/1:10,0:10:3.36:3,0,214	0/1:32,4:36:5.23:287,0,5	1/1:21,0:21:2.64:122,3,0	0/1:20,1:17:20.71:157,0,21	1/1:9,0:9:22.07:106,22,0	1/1:25,0:24:10.89:49,11,0	1/1:15,0:15:8.78:54,9,0	0/0:15,0:15:4.01:0,4,189	0/0:35,0:35:59.66:0,60,1053	1/1:21,0:21:28.91:161,29,0	0/1:25,0:24:41.22:41,0,411	0/1:16,1:16:4:109,0,4	0/0:14,0:14:3.43:0,3,136
chr10	89393702	.	CGT	C	1641.59	PASS	AB=0.920;AC=27;AF=0.482;AN=56;BaseQRankSum=7.497;DP=553;FS=5.929;HRun=0;HaplotypeScore=162.3296;InbreedingCoeff=0.2740;MQ=47.56;MQ0=9;MQRankSum=-4.321;QD=4.74;ReadPosRankSum=3.189;VQSLOD=2.6822;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:43,1:42:20.16:20,0,156	0/1:9,0:9:12.41:12,0,42	0/0:19,0:2:3.90:0,4,40	0/0:26,0:2:5.49:0,5,35	1/1:10,5:15:9.02:93,9,0	1/1:5,13:18:15.08:122,15,0	1/1:11,8:19:9.03:107,9,0	0/0:16,0:16:22.79:0,23,182	1/1:4,18:22:42.02:409,42,0	0/1:18,2:19:20.58:21,0,181	0/0:7,0:7:14.90:0,15,176	1/1:1,7:8:7.25:62,7,0	0/1:25,0:25:53.27:53,0,597	1/1:9,11:20:27.05:271,27,0	0/0:26,0:25:37.03:0,37,299	0/0:10,0:10:20.21:0,20,217	0/0:35,0:35:14.49:0,14,426	0/1:11,11:22:8.24:133,0,8	0/1:20,0:17:8.14:8,0,148	0/1:7,1:8:21.60:23,0,22	1/1:8,16:23:11.97:142,12,0	1/1:5,6:15:6.01:56,6,0	0/0:12,2:14:10.26:0,10,121	0/0:33,2:35:7.19:0,7,982	1/1:4,16:20:22.85:210,23,0	0/1:21,5:25:71.98:72,0,416	0/0:18,0:17:26.77:0,27,197	0/1:11,0:11:17.70:18,0,153
chr10	89393718	.	T	TGC	1562.34	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=3.224;DP=549;FS=1.039;HRun=0;HaplotypeScore=149.1556;InbreedingCoeff=0.6908;MQ=54.25;MQ0=6;MQRankSum=2.446;QD=15.17;ReadPosRankSum=2.725;VQSLOD=3.2880;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:42:35.67:0,36,397	1/1:4,1:5:14.99:181,15,0	0/0:28,0:12:27.95:0,28,282	0/0:34,0:13:32.91:0,33,332	0/0:10,0:10:14.88:0,15,110	0/1:19,0:19:6.83:7,0,132	0/0:17,0:17:29.89:0,30,238	0/0:18,0:18:29.33:0,29,317	0/0:26,0:26:43.03:0,43,352	0/0:16,0:16:27.34:0,27,378	0/0:9,0:9:23.93:0,24,272	0/0:12,0:12:3.47:0,3,123	0/0:24,0:24:62.59:0,63,808	0/0:19,0:19:35.24:0,35,276	1/1:22,2:24:33.70:495,34,0	0/0:11,0:11:27:0,27,339	1/1:34,1:35:25.48:1021,25,0	0/0:20,0:20:38.93:0,39,254	0/1:20,0:20:0.84:1,0,329	0/0:8,0:8:10.59:0,11,117	0/0:33,0:32:32.30:0,32,250	0/0:12,0:12:11.94:0,12,91	0/0:10,0:10:16.25:0,16,168	0/0:31,0:31:90.12:0,90,1193	0/0:19,0:19:13.71:0,14,169	0/0:23,0:22:57.02:0,57,663	0/0:15,0:14:7.37:0,7,131	0/0:7,0:7:19.85:0,20,236
chr10	89393722	.	T	TGC	1348.05	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-4.090;DP=557;FS=19.631;HRun=0;HaplotypeScore=149.8733;InbreedingCoeff=0.8534;MQ=58.69;MQ0=6;MQRankSum=0.053;QD=19.54;ReadPosRankSum=1.237;VQSLOD=2.8024;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:42:38.69:0,39,421	0/1:4,0:4:3.81:4,0,28	0/0:32,0:16:40.34:0,40,417	0/0:38,0:17:41.99:0,42,429	0/0:11,0:11:20.96:0,21,172	0/0:20,0:20:28.76:0,29,228	0/0:19,0:19:32.95:0,33,271	1/1:12,6:18:44.06:424,44,0	0/0:27,0:27:56.91:0,57,469	0/0:12,0:12:23.36:0,23,301	0/0:9,0:9:21.02:0,21,244	0/0:14,0:14:20.82:0,21,170	0/0:23,0:23:65.77:0,66,776	0/0:20,0:20:43.58:0,44,335	0/0:24,0:24:19.12:0,19,238	0/0:12,0:12:27.04:0,27,313	0/0:33,0:33:7.25:0,7,388	0/0:19,0:19:32.75:0,33,239	1/1:23,0:23:54.96:517,55,0	1/1:7,0:7:17.71:155,18,0	0/0:33,0:32:35.08:0,35,278	0/0:12,0:12:11.99:0,12,100	0/0:7,0:7:9.02:0,9,110	0/0:31,0:31:90.11:0,90,1112	0/0:19,0:19:26.84:0,27,220	0/0:21,0:20:51.05:0,51,563	1/1:17,0:16:20.72:408,21,0	0/0:8,0:8:22.26:0,22,243
chr10	89394131	.	C	CAA	3046.99	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=2.258;DP=548;FS=3.177;HRun=0;HaplotypeScore=87.2499;InbreedingCoeff=0.9951;MQ=65.09;MQ0=0;MQRankSum=-3.146;QD=47.61;ReadPosRankSum=-1.567;VQSLOD=4.3746;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:99:0,117,1876	0/0:10,0:10:30.10:0,30,487	0/0:11,0:11:30.10:0,30,471	0/0:15,0:15:45.02:0,45,649	0/0:28,0:28:78.26:0,78,1256	0/0:17,0:17:48.16:0,48,782	0/0:22,0:22:66.23:0,66,1075	1/1:3,12:15:36.12:679,36,0	0/0:14,0:14:42.10:0,42,656	0/0:22,0:22:66.21:0,66,1046	0/0:12,0:12:36.11:0,36,563	0/0:13,0:13:39.13:0,39,634	0/0:18,0:18:51.16:0,51,809	0/0:16,0:16:45.11:0,45,682	0/0:16,0:16:48.16:0,48,782	0/0:16,0:15:48.16:0,48,780	0/0:25,0:25:75.26:0,75,1212	0/0:25,0:25:72.23:0,72,1150	1/1:1,11:12:33.08:599,33,0	1/1:0,19:18:51.17:988,51,0	0/0:54,0:54:99:0,160,2585	0/0:22,0:22:63.21:0,63,1017	0/0:14,0:14:39.13:0,39,634	0/0:34,0:34:99:0,99,1613	0/0:16,0:16:45.12:0,45,723	0/0:17,0:17:51.17:0,51,809	1/1:1,16:17:48.16:941,48,0	0/0:5,0:5:15.05:0,15,245
chr10	89394230	.	T	TTC	274.29	PASS	AB=0.919;AC=23;AF=0.460;AN=50;BaseQRankSum=5.909;DP=487;FS=30.615;HRun=0;HaplotypeScore=74.3156;InbreedingCoeff=0.3280;MQ=70.09;MQ0=14;MQRankSum=-2.168;QD=1.10;ReadPosRankSum=-2.332;VQSLOD=-0.5349;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:0.39:0,0,58	1/1:5,0:5:1.25:3,1,0	./.	0/1:62,0:21:3.98:4,0,12	./.	1/1:20,0:20:9:90,9,0	0/0:17,0:16:0.32:0,0,0	0/0:32,0:31:2.54:0,3,26	1/1:17,0:17:2.04:6,2,0	0/0:12,0:12:11.62:0,12,77	0/0:5,0:5:11.96:0,12,95	1/1:14,0:14:8.35:55,8,0	0/0:14,0:13:17.95:0,18,148	1/1:6,0:6:8.22:58,8,0	0/1:19,0:19:20.17:64,0,20	0/1:13,0:13:9.05:9,0,111	0/1:7,14:22:24:47,0,24	1/1:12,0:12:3.85:22,4,0	0/0:12,0:11:2.98:0,3,22	0/0:8,0:7:0.47:0,0,1	1/1:23,0:23:2.99:24,3,0	0/1:12,0:10:0:0,0,0	0/0:9,0:9:4.55:0,5,29	0/0:29,0:28:41.91:0,42,359	1/1:11,0:11:5.21:22,5,0	0/0:11,0:17:21.32:0,21,153	1/1:12,0:12:2.88:15,3,0	./.
chr10	89394267	.	T	TCACACACACA	2349.39	PASS	AB=1.000;AC=28;AF=0.560;AN=50;BaseQRankSum=2.289;DP=437;FS=18.995;HRun=0;HaplotypeScore=116.0884;InbreedingCoeff=0.5321;MQ=44.08;MQ0=18;MQRankSum=-4.331;QD=10.00;ReadPosRankSum=-0.042;VQSLOD=0.9228;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:30:0.25:1,0,0	0/1:2,0:2:11.97:12,0,21	0/0:6,0:3:8.99:0,9,123	0/0:11,0:4:9:0,9,166	./.	1/1:21,0:20:11.98:205,12,0	1/1:10,0:9:6.02:181,6,0	1/1:17,0:14:20.35:376,20,0	./.	0/0:14,0:14:12.90:0,13,441	0/0:13,0:13:14.67:0,15,436	1/1:4,0:13:6.02:226,6,0	0/0:18,0:17:18.87:0,19,524	1/1:4,10:14:3.01:133,3,0	0/0:25,0:25:26.90:0,27,1005	0/1:14,0:14:2.06:2,0,402	0/0:28,0:29:36.97:0,37,943	1/1:8,0:7:16.24:432,16,0	1/1:16,0:13:18.03:375,18,0	1/1:8,0:7:2.68:86,3,0	1/1:13,0:12:6.34:100,6,0	1/1:13,0:11:6.02:222,6,0	0/1:11,0:11:3.31:3,0,365	0/0:38,0:37:37.85:0,38,1123	./.	0/1:28,0:28:28.20:28,0,701	1/1:4,9:13:3.32:141,3,0	0/0:6,0:4:11.93:0,12,230
chr10	89394296	.	C	CACACACACAT	1385.13	PASS	AB=0.967;AC=15;AF=0.268;AN=56;BaseQRankSum=5.843;DP=431;FS=1.335;HRun=0;HaplotypeScore=121.6055;InbreedingCoeff=-0.3011;MQ=53.38;MQ0=9;MQRankSum=-5.040;QD=6.86;ReadPosRankSum=-2.425;VQSLOD=1.7648;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:1,16:29:0:0,0,0	0/1:2,0:2:11.97:12,0,41	0/0:13,0:8:22.16:0,22,261	0/1:16,0:10:6.66:7,0,227	0/0:12,0:10:8.94:0,9,68	0/1:23,0:22:99:247,0,116	0/1:11,0:11:79.88:94,0,80	0/1:22,0:20:99:128,0,196	0/1:8,0:7:10.99:11,0,18	0/0:17,0:17:42.33:0,42,756	0/0:12,0:12:23.63:0,24,575	0/1:14,0:14:99:170,0,142	0/0:9,0:9:18.95:0,19,600	0/1:10,0:10:14.97:115,0,15	0/0:25,0:25:42.06:0,42,1263	0/0:13,0:13:6.90:0,7,570	0/0:37,0:37:46.61:0,47,1348	0/1:9,0:8:95.87:106,0,96	0/1:14,0:12:99:247,0,118	0/1:8,0:7:33.99:57,0,34	0/1:7,0:6:12.03:57,0,12	0/1:16,0:13:64.90:162,0,65	0/0:16,0:16:14.40:0,14,561	0/0:32,0:32:70.50:0,71,1547	0/0:10,0:10:5.96:0,6,45	0/0:26,0:26:11.55:0,12,1057	0/1:11,0:11:55.45:123,0,55	0/0:7,0:7:20.90:0,21,336
chr10	89394691	.	CTT	C	723.44	PASS	AB=0.817;AC=23;AF=0.411;AN=56;BaseQRankSum=6.097;DP=327;FS=6.426;HRun=17;HaplotypeScore=54.6772;InbreedingCoeff=0.7064;MQ=62.39;MQ0=8;MQRankSum=1.969;QD=7.02;ReadPosRankSum=4.796;VQSLOD=-0.4754;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:22:29.55:0,30,217	0/0:3,0:3:5.96:0,6,45	0/0:5,0:4:0.89:0,1,2	0/1:6,0:7:12.95:13,0,42	0/1:6,3:9:0.81:18,0,1	1/1:6,5:10:11.87:95,12,0	1/1:4,7:10:26.60:200,27,0	0/0:21,0:33:33.20:0,33,295	1/1:3,4:8:11.66:101,12,0	0/0:12,0:12:23.94:0,24,230	0/0:11,0:12:20.25:0,20,178	1/1:4,3:8:11.08:78,11,0	0/0:12,0:15:29.35:0,29,247	1/1:2,2:5:8.59:59,9,0	0/0:17,0:17:35.65:0,36,272	0/0:14,0:15:23.21:0,23,252	0/0:13,0:14:25.85:0,26,193	1/1:4,4:9:8.45:48,8,0	0/0:12,0:17:12.39:0,12,96	1/1:3,1:3:5.98:47,6,0	1/1:5,5:10:13.69:100,14,0	1/1:3,5:8:14.89:114,15,0	0/0:10,0:13:20.69:0,21,199	0/0:23,0:21:25.78:0,26,226	1/1:4,1:6:5.41:35,5,0	0/0:9,0:9:14.89:0,15,120	0/1:4,1:7:10.67:15,0,11	0/0:8,0:9:18.57:0,19,144
chr10	89394924	.	T	TC	2000.83	PASS	AB=0.533;AC=33;AF=0.611;AN=54;BaseQRankSum=-1.735;DP=253;FS=2.420;HRun=8;HaplotypeScore=30.3322;InbreedingCoeff=0.7129;MQ=75.60;MQ0=1;MQRankSum=-3.390;QD=14.39;ReadPosRankSum=0.192;VQSLOD=2.3593;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:30.09:346,30,0	1/1:0,2:2:2.97:20,3,0	0/0:14,0:11:7.72:0,8,151	0/0:19,0:17:12.53:0,13,228	1/1:1,10:11:18.04:197,18,0	1/1:1,3:4:6.02:69,6,0	0/1:2,14:16:1.16:223,0,1	1/1:6,0:6:1.82:5,2,0	1/1:2,5:7:15:158,15,0	0/0:11,0:11:24.01:0,24,219	0/0:6,0:6:11.99:0,12,107	./.	0/0:7,0:7:2.96:0,3,27	1/1:1,8:9:6.02:69,6,0	1/1:2,6:8:12.03:130,12,0	0/0:14,0:14:29.95:0,30,263	1/1:1,9:10:24.06:268,24,0	1/1:0,11:11:18.04:198,18,0	1/1:2,0:4:5.68:29,6,0	1/1:1,0:2:2.84:14,3,0	1/1:3,10:13:15.03:164,15,0	1/1:2,0:2:6:59,6,0	0/0:5,0:5:8.98:0,9,76	0/0:20,0:20:47.96:0,48,430	1/1:1,8:8:18.05:208,18,0	0/0:6,0:6:12:0,12,110	1/1:0,5:4:3.01:35,3,0	0/0:4,0:4:9:0,9,82
chr10	89395114	.	C	CGTGTGTGTGTGTGT	6672.13	PASS	AB=1.000;AC=36;AF=0.692;AN=52;BaseQRankSum=2.411;DP=590;FS=12.073;HRun=0;HaplotypeScore=218.5022;InbreedingCoeff=0.6053;MQ=64.14;MQ0=9;MQRankSum=-6.457;QD=16.43;ReadPosRankSum=-3.764;VQSLOD=1.9266;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,5:30:6.02:266,6,0	1/1:3,0:3:3.01:50,3,0	./.	0/1:30,0:22:15.16:15,0,66	1/1:22,0:20:6.02:249,6,0	1/1:15,0:22:3.01:143,3,0	1/1:28,0:28:14.98:196,15,0	1/1:26,0:22:24.07:690,24,0	1/1:25,0:25:21.99:789,22,0	0/0:22,0:22:38.98:0,39,1058	0/0:15,0:17:14.29:0,14,923	1/1:32,0:32:24.05:917,24,0	0/0:23,0:23:42.12:0,42,1443	1/1:9,0:22:3.01:135,3,0	1/1:4,0:17:27.09:1159,27,0	0/1:20,0:20:99:131,0,1302	1/1:19,0:26:12.04:518,12,0	1/1:11,0:10:15.05:560,15,0	1/1:15,0:13:3.01:170,3,0	./.	1/1:30,0:30:12.91:138,13,0	1/1:11,0:11:3.01:66,3,0	0/0:18,0:18:32:0,32,932	0/0:28,0:31:57.03:0,57,1799	1/1:10,0:15:3.01:143,3,0	0/0:29,0:31:45.11:0,45,1445	1/1:17,0:18:11.77:336,12,0	0/0:4,0:4:12.04:0,12,386
chr10	89395292	.	TG	T	6371.09	PASS	AB=0.890;AC=38;AF=0.679;AN=56;BaseQRankSum=8.431;DP=528;FS=24.626;HRun=9;HaplotypeScore=63.0286;InbreedingCoeff=0.8517;MQ=62.63;MQ0=3;MQRankSum=-1.165;QD=16.81;ReadPosRankSum=0.437;VQSLOD=3.4459;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:38:24.38:229,24,0	1/1:2,8:10:24.01:220,24,0	0/0:15,0:13:4.95:0,5,172	0/0:16,0:13:22.10:0,22,267	1/1:0,22:22:60:542,60,0	1/1:3,19:21:48.02:439,48,0	1/1:2,17:19:42.02:384,42,0	1/1:13,0:13:20.68:146,21,0	1/1:3,22:25:56.93:506,57,0	0/0:17,0:17:33.09:0,33,373	0/1:5,1:6:18.44:18,0,60	1/1:6,18:24:45:412,45,0	0/0:21,0:21:57.15:0,57,646	1/1:1,13:14:33.01:302,33,0	1/1:0,22:22:48.02:439,48,0	0/0:14,0:12:33.10:0,33,380	1/1:3,31:34:84.03:769,84,0	1/1:1,11:12:24.01:220,24,0	1/1:16,0:16:20.64:133,21,0	1/1:14,0:13:23.16:133,23,0	1/1:3,30:33:78.04:714,78,0	1/1:1,10:11:26.97:239,27,0	0/1:11,1:12:0.38:0,0,249	0/0:30,0:30:87.23:0,87,978	1/1:2,11:12:29.97:266,30,0	0/0:30,0:30:48.13:0,48,543	1/1:18,0:18:38.55:261,39,0	0/0:5,0:5:15.04:0,15,173
chr10	89395405	.	A	ACCCTCC	7035.26	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.332;DP=434;FS=16.510;HRun=0;HaplotypeScore=105.8275;InbreedingCoeff=0.9583;MQ=79.70;MQ0=0;MQRankSum=-11.555;QD=86.86;ReadPosRankSum=-0.626;VQSLOD=5.2659;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,17:23:63.19:1989,63,0	0/0:3,0:3:9.03:0,9,213	0/0:14,0:13:30.10:0,30,699	0/0:15,0:13:26.11:0,26,715	0/0:16,0:16:42.14:0,42,992	0/0:12,0:12:36.12:0,36,786	0/0:23,0:23:63.22:0,63,1441	1/1:7,6:13:36.10:1149,36,0	0/0:14,0:14:42.14:0,42,983	0/0:17,0:17:51.18:0,51,1206	0/0:16,0:16:42.14:0,42,948	0/0:19,0:19:51.18:0,51,1184	0/0:7,0:7:18.06:0,18,425	0/0:8,0:8:24.08:0,24,513	0/0:17,0:17:42.13:0,42,977	0/0:16,0:16:42.14:0,42,988	0/0:27,0:27:72.23:0,72,1634	0/0:15,0:15:39.13:0,39,920	1/1:4,7:12:30.08:931,30,0	1/1:6,10:16:39.13:1328,39,0	0/0:24,0:24:69.21:0,69,1532	0/0:7,0:7:18.06:0,18,352	0/0:13,0:13:36.11:0,36,754	0/0:22,0:22:53.77:0,54,1273	0/0:20,0:20:45.15:0,45,1013	0/0:26,0:26:63.21:0,63,1442	1/1:5,12:17:48.16:1638,48,0	0/0:2,0:2:6.02:0,6,142
chr10	89395431	.	CT	C	387.58	PASS	AB=0.847;AC=10;AF=0.179;AN=56;BaseQRankSum=2.188;DP=416;FS=1.911;HRun=16;HaplotypeScore=74.4509;InbreedingCoeff=0.2371;MQ=59.52;MQ0=6;MQRankSum=2.281;QD=2.87;ReadPosRankSum=2.839;VQSLOD=-0.2852;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:7.98:0,8,53	1/1:1,2:3:5.88:36,6,0	0/0:15,0:7:11.12:0,11,60	0/0:11,0:7:0.31:0,0,2	0/1:12,1:12:4.68:5,0,63	0/0:11,0:14:13.99:0,14,122	0/0:9,0:14:17.46:0,17,108	0/0:9,0:8:0:0,0,0	0/0:10,0:11:23.86:0,24,187	0/0:21,0:22:14.63:0,15,120	0/1:15,3:18:26.66:27,0,89	0/0:20,0:20:50:0,50,373	0/0:19,0:18:26.82:0,27,180	0/0:8,0:9:16.65:0,17,123	1/1:14,11:25:22.03:218,22,0	0/0:18,0:17:14.75:0,15,258	0/1:21,9:31:50.77:189,0,51	0/0:16,3:18:8.34:0,8,166	0/0:6,0:6:0:0,0,0	0/0:6,0:5:0:0,0,0	0/0:12,0:14:8.63:0,9,96	0/1:6,1:7:3.04:3,0,80	0/1:13,2:15:26.14:26,0,104	0/0:17,0:17:25.56:0,26,278	0/1:16,4:20:18.04:18,0,207	0/0:25,2:28:15.94:0,16,237	0/0:8,0:8:0:0,0,0	0/0:5,0:5:0.35:0,0,59
chr10	89395452	.	CT	C	235.05	PASS	AC=2;AF=0.043;AN=46;BaseQRankSum=1.122;DP=368;FS=11.425;HRun=9;HaplotypeScore=68.7928;InbreedingCoeff=0.6146;MQ=54.57;MQ0=14;MQRankSum=-1.453;QD=11.19;ReadPosRankSum=-0.305;VQSLOD=1.4343;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,16:21:36.01:327,36,0	0/0:2,0:2:2.92:0,3,17	0/0:12,0:4:2.90:0,3,16	./.	0/0:11,0:9:20.82:0,21,147	0/0:13,1:13:2.29:0,2,168	0/0:11,0:11:15.34:0,15,109	./.	0/0:14,0:14:28.76:0,29,203	0/0:17,0:17:48.08:0,48,516	0/0:16,0:16:36.10:0,36,405	0/0:16,0:16:42.97:0,43,317	0/0:16,0:16:42.09:0,42,470	0/0:12,0:12:26.77:0,27,193	0/0:20,0:20:53.64:0,54,400	0/0:16,0:16:44.11:0,44,453	0/0:30,0:28:61.03:0,61,422	0/0:15,0:14:32.70:0,33,234	./.	./.	0/0:13,0:12:20.87:0,21,167	0/0:14,0:13:32.64:0,33,235	0/0:12,0:13:35.94:0,36,395	0/0:14,0:14:30.92:0,31,325	0/0:19,0:18:47.61:0,48,359	0/0:29,1:30:35.71:0,36,656	./.	0/0:5,0:5:12.04:0,12,139
chr10	89395503	.	TTA	T	1806.28	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.624;DP=400;FS=5.817;HRun=0;HaplotypeScore=64.3853;InbreedingCoeff=0.9420;MQ=65.42;MQ0=0;MQRankSum=-5.442;QD=40.14;ReadPosRankSum=-1.099;VQSLOD=4.9556;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.12:0,72,1170	0/0:2,0:2:6.02:0,6,108	0/0:19,0:17:38.45:0,38,682	0/0:9,0:6:11.18:0,11,133	0/0:20,0:19:54.19:0,54,964	0/0:13,0:13:39.13:0,39,691	0/0:14,0:14:42.09:0,42,719	1/1:0,19:18:51.17:779,51,0	0/0:9,0:9:27.09:0,27,485	0/0:18,0:18:54.18:0,54,943	0/0:18,0:18:54.17:0,54,920	0/0:11,0:11:33.08:0,33,529	0/0:14,0:14:38.92:0,39,633	0/0:14,0:14:42.12:0,42,697	0/0:21,0:21:63.18:0,63,1029	0/0:17,0:17:51.15:0,51,827	0/0:29,0:29:83.74:0,84,1402	0/0:10,0:9:24.08:0,24,431	1/1:0,11:11:33.11:504,33,0	1/1:0,4:4:12.04:178,12,0	0/0:12,0:12:33.09:0,33,561	0/0:8,0:8:24.05:0,24,373	0/0:7,0:7:21.07:0,21,377	0/0:10,0:10:30.09:0,30,489	0/0:17,0:17:47.86:0,48,750	0/0:32,0:32:93.29:0,93,1584	1/1:0,11:11:33.11:502,33,0	0/0:4,0:4:12.02:0,12,171
chr10	89395547	.	G	GACACACCAGA	6765.79	PASS	AB=0.923;AC=9;AF=0.161;AN=56;BaseQRankSum=1.702;DP=478;FS=4.684;HRun=0;HaplotypeScore=142.2573;InbreedingCoeff=0.8429;MQ=58.70;MQ0=4;MQRankSum=-10.195;QD=95.29;ReadPosRankSum=-1.040;VQSLOD=4.7640;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.18:0,60,1847	0/0:3,0:3:9.03:0,9,284	0/0:20,0:13:39.13:0,39,1210	0/0:25,0:18:54.18:0,54,1576	0/0:26,0:26:75.26:0,75,2455	0/0:14,0:14:39.13:0,39,1239	0/0:16,0:16:48.16:0,48,1591	1/1:8,6:9:24.07:1156,24,0	0/0:12,0:12:36.11:0,36,1079	0/0:24,0:24:69.24:0,69,2341	0/0:21,0:21:59.84:0,60,2030	0/0:17,0:17:51.18:0,51,1664	0/0:14,0:14:42.14:0,42,1426	0/0:17,0:17:48.16:0,48,1592	0/0:26,0:26:75.26:0,75,2539	0/0:19,0:19:57.20:0,57,1928	0/0:36,0:36:99:0,108,3506	0/1:11,0:11:99:117,0,659	1/1:8,4:12:36.05:1382,36,0	1/1:3,8:11:27.09:1405,27,0	0/0:16,0:16:48.16:0,48,1507	0/0:4,0:4:12.04:0,12,343	0/0:15,0:15:42.12:0,42,1271	0/0:14,0:14:42.14:0,42,1388	0/0:14,0:14:33.10:0,33,1044	0/0:26,0:26:72.24:0,72,2301	1/1:8,13:20:54.15:2706,54,0	0/0:5,0:5:15.05:0,15,509
chr10	89395740	.	CA	C	1324.53	PASS	AB=0.796;AC=31;AF=0.554;AN=56;BaseQRankSum=2.568;DP=505;FS=0.960;HRun=17;HaplotypeScore=70.2514;InbreedingCoeff=0.1794;MQ=71.18;MQ0=2;MQRankSum=3.220;QD=3.70;ReadPosRankSum=2.600;VQSLOD=0.0955;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:47:94.71:0,95,504	1/1:2,0:3:4.95:22,5,0	0/0:26,0:12:4.59:0,5,33	0/1:29,0:13:6.17:6,0,9	0/1:10,1:11:14.42:14,0,14	0/1:9,5:15:71.06:71,0,78	1/1:16,7:23:0.01:76,0,0	1/1:11,7:24:27.20:128,27,0	1/1:5,9:14:20.25:117,20,0	0/1:14,2:18:3.89:4,0,167	0/0:9,0:9:16.99:0,17,127	1/1:3,6:11:13.61:72,14,0	0/0:16,0:16:4.13:0,4,117	0/1:7,9:17:18.63:53,0,19	0/1:7,12:20:6.46:91,0,6	0/1:11,0:12:9.71:10,0,98	0/1:8,14:24:20.78:177,0,21	1/1:3,4:9:12.83:62,13,0	0/1:19,0:21:30.13:33,0,30	1/1:6,12:22:39.30:196,39,0	1/1:3,8:12:18.67:95,19,0	1/1:3,6:9:11.51:66,12,0	0/0:11,0:15:18.13:0,18,143	0/0:23,1:27:24:0,24,281	0/1:7,9:17:14.96:80,0,15	0/1:22,3:27:6.26:6,0,230	1/1:14,3:18:22.18:129,22,0	0/0:5,0:5:11.97:0,12,96
chr10	89395839	.	GA	G	1354.03	PASS	AB=0.731;AC=15;AF=0.268;AN=56;BaseQRankSum=4.061;DP=483;FS=3.887;HRun=14;HaplotypeScore=79.5638;InbreedingCoeff=0.4575;MQ=58.73;MQ0=7;MQRankSum=-1.433;QD=7.65;ReadPosRankSum=1.768;VQSLOD=3.0936;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,1:39:45.35:0,45,352	0/1:2,4:6:12.96:67,0,13	0/0:9,0:7:7.68:0,8,47	0/0:11,0:8:3.65:0,4,77	0/0:25,1:29:17.32:0,17,412	0/0:12,0:14:32.54:0,33,258	0/0:16,1:16:12.43:0,12,249	1/1:10,16:25:17.78:248,18,0	0/0:10,1:12:20.84:0,21,173	0/0:24,0:26:34.29:0,34,412	0/1:10,2:16:8.66:9,0,169	0/0:12,0:12:24.02:0,24,219	0/0:7,1:10:0.07:0,0,111	0/0:11,0:11:20.96:0,21,185	1/1:2,9:11:9.30:129,9,0	0/0:11,0:14:9.26:0,9,192	0/1:15,23:38:47.57:397,0,48	0/0:21,0:23:37.89:0,38,402	1/1:8,15:20:13.77:238,14,0	1/1:5,10:16:31.75:211,32,0	0/1:12,2:13:11.22:11,0,178	0/0:6,0:6:14.97:0,15,131	0/0:16,0:16:35.98:0,36,318	0/0:23,0:24:68.69:0,69,580	0/0:12,0:12:32.66:0,33,275	0/0:16,1:19:18.10:0,18,276	1/1:5,14:19:10.94:205,11,0	0/1:1,1:2:14.58:15,0,22
chr10	89395857	.	TA	T	726.07	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.521;DP=507;FS=9.978;HRun=9;HaplotypeScore=82.1123;InbreedingCoeff=0.8911;MQ=64.34;MQ0=1;MQRankSum=-0.627;QD=14.82;ReadPosRankSum=2.130;VQSLOD=3.0572;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,39:48:90.52:821,91,0	0/0:6,0:6:11.95:0,12,121	0/0:15,0:12:22.94:0,23,190	0/0:17,0:10:24.04:0,24,256	0/0:29,0:29:72.08:0,72,792	0/0:12,0:12:32.43:0,32,341	0/0:18,0:17:48.09:0,48,529	0/0:34,0:33:59.70:0,60,475	0/0:9,0:9:25.32:0,25,280	0/0:26,0:26:69.17:0,69,762	0/0:17,0:17:45.08:0,45,488	0/0:12,0:12:33.08:0,33,368	0/0:10,0:10:24.03:0,24,262	0/0:13,0:13:36.07:0,36,382	0/0:10,0:10:19.22:0,19,182	0/0:12,0:12:24.06:0,24,269	0/0:35,0:34:96.29:0,96,1107	0/0:21,0:21:23.92:0,24,525	0/0:25,0:24:56.04:0,56,380	0/0:16,0:16:20.53:0,21,133	0/0:16,0:15:45.12:0,45,510	0/0:8,0:8:18.04:0,18,199	0/0:17,0:17:45.12:0,45,510	0/0:25,0:25:64.06:0,64,717	0/0:13,0:13:30.09:0,30,343	0/0:17,0:18:39.10:0,39,433	0/0:21,0:21:43.62:0,44,300	0/0:3,0:3:9.03:0,9,104
chr10	89396004	.	T	TA	4649.30	PASS	AB=0.600;AC=35;AF=0.625;AN=56;BaseQRankSum=4.246;DP=576;FS=6.620;HRun=13;HaplotypeScore=95.5173;InbreedingCoeff=0.8715;MQ=72.84;MQ0=2;MQRankSum=-3.745;QD=12.88;ReadPosRankSum=-2.306;VQSLOD=3.9551;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:37:51.13:258,51,0	1/1:1,4:6:8.85:70,9,0	0/0:28,0:22:4.17:0,4,156	0/0:32,0:20:23.40:0,23,164	1/1:4,14:18:41.69:341,42,0	1/1:2,19:23:38.72:335,39,0	0/1:4,7:12:14.30:155,0,14	1/1:22,0:32:64.20:346,64,0	1/1:6,9:16:26.97:241,27,0	0/0:28,0:28:56.31:0,56,389	0/0:15,0:15:13.32:0,13,186	1/1:2,12:14:18.02:167,18,0	0/0:17,0:17:35.60:0,36,246	1/1:3,14:17:23.95:212,24,0	1/1:3,13:18:23.99:329,24,0	0/0:15,0:18:31.73:0,32,211	1/1:7,22:29:20.44:461,20,0	1/1:5,14:19:24.41:360,24,0	1/1:15,0:21:42.53:206,43,0	1/1:9,0:20:53.65:274,54,0	1/1:13,4:17:23.79:209,24,0	1/1:4,10:14:20.95:184,21,0	0/0:15,1:17:10.19:0,10,200	0/0:19,1:20:22.71:0,23,301	1/1:2,17:19:27.03:251,27,0	0/0:30,1:31:22.55:0,23,298	1/1:19,0:24:48.77:251,49,0	0/0:5,0:5:8.85:0,9,62
chr10	89396030	.	CAACAA	C	2219.65	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=0.199;DP=588;FS=8.105;HRun=0;HaplotypeScore=136.6533;InbreedingCoeff=0.9275;MQ=65.60;MQ0=2;MQRankSum=-6.173;QD=26.74;ReadPosRankSum=-0.828;VQSLOD=2.4022;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:69.23:0,69,1929	0/0:6,0:6:12.04:0,12,319	0/0:40,0:31:68.18:0,68,1628	0/0:37,0:24:3.16:0,3,1053	0/0:21,0:21:42.14:0,42,1198	0/0:19,0:19:36.12:0,36,968	0/0:16,0:16:36.12:0,36,1030	1/1:9,10:19:30.08:556,30,0	0/0:19,0:19:48.16:0,48,1360	0/0:30,0:31:72.25:0,72,2020	0/0:17,0:17:48.16:0,48,1368	0/0:12,0:12:18.06:0,18,488	0/0:20,0:20:54.19:0,54,1562	0/0:15,0:15:33.11:0,33,891	0/0:21,0:21:36.08:0,36,1001	0/0:14,0:14:36.11:0,36,982	0/0:19,0:19:39.13:0,39,1119	0/0:22,0:23:57.18:0,57,1487	1/1:14,11:23:48.14:876,48,0	1/1:5,10:15:21.06:357,21,0	0/0:19,0:19:54.19:0,54,1546	0/0:16,0:16:39.13:0,39,1053	0/0:19,0:19:48.16:0,48,1279	0/0:25,0:25:63.17:0,63,1725	0/0:22,0:22:48.16:0,48,1412	0/0:40,0:40:99:0,105,3120	1/1:10,13:24:29.08:589,29,0	0/0:3,0:3:9.03:0,9,268
chr10	89396602	.	TCAAAA	T	3778.99	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.950;DP=665;FS=0.491;HRun=0;HaplotypeScore=170.8332;InbreedingCoeff=0.9914;MQ=73.84;MQ0=0;MQRankSum=-12.081;QD=53.99;ReadPosRankSum=-0.508;VQSLOD=3.8772;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,175,5269	0/0:13,0:13:36.11:0,36,940	0/0:29,0:26:66:0,66,1739	0/0:30,0:28:74.99:0,75,2119	0/0:20,0:20:57.19:0,57,1583	0/0:25,0:25:72.23:0,72,2134	0/0:24,0:24:69.23:0,69,1994	1/1:0,17:17:51.17:1043,51,0	0/0:28,0:28:75.26:0,75,2295	0/0:32,0:32:90.31:0,90,2701	0/0:18,0:18:51.18:0,51,1577	0/0:29,0:29:87.30:0,87,2583	0/0:24,0:24:66.23:0,66,1941	0/0:25,0:25:69.24:0,69,2032	0/0:17,0:17:51.18:0,51,1578	0/0:24,0:24:72.25:0,72,2230	0/0:37,0:37:99:0,108,3209	0/0:20,0:20:57.19:0,57,1596	1/1:1,12:13:36.12:755,36,0	1/1:0,21:21:51.17:1038,51,0	0/0:34,0:34:99:0,99,2925	0/0:18,0:18:51.17:0,51,1513	0/0:18,0:18:54.19:0,54,1671	0/0:23,0:23:69.24:0,69,2088	0/0:15,0:15:45.14:0,45,1301	0/0:30,0:30:84.29:0,84,2480	1/1:1,18:19:45.14:943,45,0	0/0:4,0:4:12.04:0,12,372
chr10	89396818	.	G	GCACACA	321.53	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=1.572;DP=550;FS=7.360;HRun=0;HaplotypeScore=171.4095;InbreedingCoeff=0.1313;MQ=69.98;MQ0=12;MQRankSum=-1.108;QD=3.87;ReadPosRankSum=1.065;VQSLOD=1.8541;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,19:24:2.70:51,3,0	0/1:11,0:11:45.27:45,0,60	0/0:33,0:18:37.80:0,38,641	0/0:53,0:23:51.36:0,51,822	0/0:14,0:14:21.05:0,21,324	0/0:11,0:10:15.02:0,15,190	0/0:18,0:18:18.05:0,18,273	0/0:26,0:26:64.44:0,64,1050	0/0:9,0:9:9.03:0,9,166	0/0:21,0:21:48.09:0,48,915	0/0:18,0:18:48.14:0,48,1001	0/0:19,0:18:29.67:0,30,488	0/0:13,0:13:33.11:0,33,698	0/0:12,0:11:15.04:0,15,244	0/1:17,0:17:85.65:174,0,86	0/0:16,0:16:36.12:0,36,783	0/1:21,0:21:42.69:142,0,43	0/0:10,0:10:27.02:0,27,462	0/0:19,0:18:37:0,37,603	0/0:20,0:21:28.03:0,28,479	0/0:17,0:17:39.12:0,39,683	0/0:17,0:16:24.54:0,25,404	0/0:24,0:24:54.18:0,54,1137	0/0:39,0:39:96.31:0,96,2006	0/0:17,0:17:25.62:0,26,416	0/0:29,0:29:59.68:0,60,1190	0/1:10,0:10:28.88:29,0,173	0/0:11,0:11:28.56:0,29,591
chr10	89396827	.	CAG	C	257.70	PASS	AB=0.884;AC=10;AF=0.185;AN=54;BaseQRankSum=5.060;DP=586;FS=7.580;HRun=0;HaplotypeScore=141.0044;InbreedingCoeff=0.1436;MQ=63.81;MQ0=13;MQRankSum=-2.575;QD=1.48;ReadPosRankSum=1.301;VQSLOD=2.2235;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:2.99:0,3,24	1/1:5,0:11:17.18:91,17,0	0/0:32,0:17:2.94:0,3,18	0/0:50,0:20:2.11:0,2,9	0/0:15,0:14:2.59:0,3,25	0/0:16,0:15:5.97:0,6,45	0/0:19,0:19:8.98:0,9,74	0/0:29,0:29:21.21:0,21,145	0/0:11,0:10:6.46:0,6,51	0/1:18,7:25:76.03:76,0,208	0/0:19,4:23:2.41:0,2,402	0/0:21,0:20:8.99:0,9,75	0/0:12,0:12:18.04:0,18,251	0/1:15,0:14:0:0,0,0	1/1:9,0:16:19.92:99,20,0	0/0:15,2:17:2.44:0,2,423	0/1:14,0:20:5.61:42,0,6	0/0:12,0:12:5.95:0,6,43	0/0:19,0:17:21.94:0,22,147	0/1:21,0:21:13.17:13,0,55	0/0:19,0:19:3:0,3,25	./.	0/0:22,4:27:14.32:0,14,549	0/1:34,4:38:5.16:5,0,747	0/0:19,0:19:3:0,3,25	0/1:23,4:28:66.55:67,0,397	0/0:16,0:16:17.92:0,18,151	0/0:15,0:15:1.46:0,1,270
chr10	89396952	.	CG	C	1934.05	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=9.772;DP=495;FS=2.444;HRun=5;HaplotypeScore=101.5353;InbreedingCoeff=0.8970;MQ=61.66;MQ0=5;MQRankSum=-1.981;QD=6.74;ReadPosRankSum=0.458;VQSLOD=-0.1036;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:77.99:0,78,736	1/1:13,0:13:9.72:47,10,0	0/0:24,0:15:30.04:0,30,327	0/0:19,0:16:21.93:0,22,320	1/1:18,0:18:26.23:190,26,0	1/1:18,0:19:32.77:179,33,0	1/1:18,0:18:16.69:93,17,0	1/1:19,0:18:29.40:178,29,0	1/1:17,0:18:29.53:141,30,0	0/0:13,0:13:27.76:0,28,356	0/0:13,0:13:30.08:0,30,377	1/1:11,0:10:15.23:62,15,0	0/0:14,0:14:33.02:0,33,394	1/1:18,0:17:16.26:79,16,0	1/1:18,0:17:14.43:84,14,0	0/0:13,0:13:16.18:0,16,395	0/1:20,0:19:10.44:73,0,10	1/1:13,0:13:8.62:49,9,0	1/1:17,0:17:18.30:134,18,0	1/1:18,0:18:14.14:130,14,0	1/1:9,4:14:19.56:195,20,0	1/1:16,0:16:13.69:76,14,0	0/0:15,0:15:42:0,42,466	0/0:18,0:20:38.09:0,38,504	1/1:16,2:18:39.86:246,40,0	0/0:32,0:32:87.22:0,87,1059	1/1:18,1:19:31.05:204,31,0	0/0:9,0:9:17.99:0,18,165
chr10	89396956	.	G	GA	1866.59	PASS	AB=0.903;AC=26;AF=0.464;AN=56;BaseQRankSum=7.190;DP=488;FS=5.240;HRun=0;HaplotypeScore=97.8114;InbreedingCoeff=0.4422;MQ=63.02;MQ0=1;MQRankSum=-1.947;QD=6.48;ReadPosRankSum=1.729;VQSLOD=3.3785;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:76.35:0,76,618	1/1:10,0:10:9.84:99,10,0	0/0:18,0:12:29.27:0,29,313	0/0:23,0:18:36.58:0,37,415	0/1:18,0:18:0.17:60,0,0	0/1:17,0:17:3.86:100,0,4	1/1:19,0:19:1.19:83,1,0	1/1:8,12:20:30.08:273,30,0	1/1:17,0:17:12.67:212,13,0	0/0:12,0:12:36.12:0,36,496	0/0:13,0:13:36.09:0,36,465	0/1:12,0:11:4.19:144,0,4	0/0:14,0:14:39.10:0,39,488	1/1:15,0:14:13.07:170,13,0	0/1:16,0:16:4.20:38,0,4	0/0:13,0:13:38.32:0,38,481	1/1:25,0:24:1.23:129,1,0	1/1:15,0:15:6.96:96,7,0	1/1:9,2:13:3.67:88,4,0	0/1:9,10:20:42.49:92,0,42	0/1:15,0:15:26.53:75,0,27	0/1:4,11:15:0.39:66,0,0	0/0:15,0:15:45.12:0,45,579	0/0:20,0:20:37.47:0,37,630	0/1:19,0:19:9.70:185,0,10	0/0:31,0:31:93.25:0,93,1204	1/1:10,11:21:7.64:143,8,0	0/0:6,0:6:18.05:0,18,224
chr10	89396957	.	G	GA	3688.62	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=8.910;DP=510;FS=2.673;HRun=11;HaplotypeScore=105.4538;InbreedingCoeff=0.8458;MQ=61.94;MQ0=1;MQRankSum=-4.331;QD=9.94;ReadPosRankSum=-2.698;VQSLOD=2.5472;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,27:37:52.94:542,53,0	1/1:13,0:13:17.67:139,18,0	0/0:16,0:11:7.66:0,8,65	0/1:22,0:17:32.98:33,0,110	1/1:20,0:20:24.90:152,25,0	1/1:20,0:20:34.64:202,35,0	1/1:23,0:23:22.50:167,22,0	1/1:22,0:22:36.33:312,36,0	1/1:19,0:19:30.71:265,31,0	0/0:11,0:12:28.93:0,29,215	0/0:12,0:13:29.81:0,30,225	1/1:13,0:12:26.85:230,27,0	0/0:12,0:13:28.85:0,29,205	1/1:17,0:16:23.04:213,23,0	1/1:18,0:18:13.64:85,14,0	0/0:12,0:12:29.86:0,30,229	1/1:25,0:25:31.96:205,32,0	1/1:18,0:18:19.83:172,20,0	1/1:12,0:12:10:103,10,0	1/1:19,0:19:7.35:155,7,0	1/1:16,0:16:18.14:173,18,0	1/1:15,0:15:9.43:80,9,0	0/0:14,0:14:29.85:0,30,229	0/0:15,1:20:8.91:0,9,238	1/1:19,0:19:31.70:289,32,0	0/0:32,0:32:62.48:0,62,471	1/1:21,0:21:18:171,18,0	0/0:6,0:6:5.93:0,6,41
chr10	89397113	.	CAT	C	1882.67	PASS	AB=0.991;AC=12;AF=0.214;AN=56;BaseQRankSum=7.803;DP=720;FS=7.432;HRun=0;HaplotypeScore=152.0154;InbreedingCoeff=0.7791;MQ=57.84;MQ0=18;MQRankSum=-5.949;QD=8.56;ReadPosRankSum=-2.875;VQSLOD=2.3770;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,10:28:29.66:294,30,0	0/0:4,0:4:12.03:0,12,198	0/1:54,0:17:55.25:55,0,176	0/1:53,0:19:39.92:40,0,123	0/0:24,0:24:49.90:0,50,831	0/0:24,0:24:59.88:0,60,820	0/0:20,0:20:57.03:0,57,768	1/1:22,6:28:77.72:657,78,0	0/0:21,0:21:54.09:0,54,811	0/0:25,0:25:72.21:0,72,1215	0/0:21,0:21:50.97:0,51,999	0/0:28,0:28:78.21:0,78,1191	0/0:27,0:27:68.98:0,69,1275	0/0:23,0:23:66.14:0,66,975	0/0:27,0:27:69.17:0,69,1174	0/0:21,0:21:63.15:0,63,1048	0/0:28,0:28:54.78:0,55,1065	0/0:15,0:15:39.06:0,39,578	1/1:8,2:10:15.67:151,16,0	1/1:9,11:20:32.94:290,33,0	0/0:36,0:36:86.39:0,86,1371	0/0:19,0:18:38.83:0,39,633	0/0:24,0:24:66.12:0,66,1073	0/0:19,0:19:44.02:0,44,900	0/0:28,0:28:75.65:0,76,1154	0/0:44,0:44:99:0,129,2199	1/1:11,14:25:65.76:577,66,0	0/0:22,0:22:53.04:0,53,812
chr10	89397115	.	TAC	T	239.68	PASS	AB=0.989;AC=10;AF=0.179;AN=56;BaseQRankSum=7.443;DP=733;FS=1.163;HRun=0;HaplotypeScore=166.6866;InbreedingCoeff=0.3051;MQ=55.89;MQ0=19;MQRankSum=-7.648;QD=1.16;ReadPosRankSum=0.827;VQSLOD=2.6381;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:19.67:103,20,0	0/0:4,0:4:12.04:0,12,193	0/0:53,0:17:22.20:0,22,209	0/0:51,0:18:18.68:0,19,250	0/1:23,1:24:3.17:3,0,432	0/0:24,0:24:4.59:0,5,396	0/0:21,0:21:38.99:0,39,357	0/1:33,0:33:42.13:42,0,93	0/0:20,0:20:51.06:0,51,497	0/0:26,0:26:66.10:0,66,997	0/0:22,0:22:23.43:0,23,834	0/0:28,0:28:72.04:0,72,666	0/0:27,1:28:41.32:0,41,1134	0/0:23,0:23:57.08:0,57,552	0/0:27,0:27:60.19:0,60,946	0/0:21,0:21:60.19:0,60,946	0/0:26,1:27:29.12:0,29,933	0/0:16,0:16:33.93:0,34,327	0/1:15,0:15:6.04:6,0,94	0/1:25,0:25:2.79:62,0,3	0/1:34,1:35:18.51:19,0,637	0/1:19,0:18:9.47:9,0,277	0/0:23,0:23:56.30:0,56,851	0/0:19,1:20:20.25:0,20,776	0/0:28,0:28:38.36:0,38,557	0/0:43,0:43:99:0,114,1744	1/1:26,0:26:4.95:137,5,0	0/0:20,0:20:39.13:0,39,625
chr10	89397127	.	CACACAGAG	C	2681.22	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=12.046;DP=689;FS=2.975;HRun=0;HaplotypeScore=232.5718;InbreedingCoeff=0.8594;MQ=57.03;MQ0=13;MQRankSum=-11.495;QD=26.81;ReadPosRankSum=-1.720;VQSLOD=2.6820;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:83.18:218,0,83	0/0:4,0:4:12.04:0,12,505	0/0:41,0:14:39.60:0,40,892	0/0:37,0:14:41.17:0,41,980	0/0:24,0:24:69.24:0,69,2256	0/0:28,0:28:52.29:0,52,2161	0/0:19,0:19:57.17:0,57,1751	1/1:15,6:21:62.55:765,63,0	0/0:21,0:21:60.21:0,60,2083	0/0:25,0:25:75.25:0,75,2963	0/0:21,0:21:63.22:0,63,2603	0/0:31,0:31:90.31:0,90,3036	0/0:27,0:27:81.28:0,81,3397	0/0:24,0:24:69.24:0,69,2308	0/0:28,0:28:72.25:0,72,2799	0/0:24,0:24:72.25:0,72,2841	0/0:26,0:26:72.25:0,72,2867	0/0:14,0:14:39.13:0,39,1335	1/1:11,2:13:24.31:279,24,0	1/1:7,11:18:24.03:476,24,0	0/0:39,0:39:99:0,114,3488	0/0:21,0:20:48.16:0,48,1531	0/0:21,0:21:60.21:0,60,2476	0/0:21,0:21:63.22:0,63,2397	0/0:28,0:28:72.25:0,72,2523	0/0:44,0:44:99:0,129,5143	1/1:6,14:20:53.91:1108,54,0	0/0:21,0:21:54.18:0,54,2077
chr10	89397131	.	CAGAG	C	2240.72	PASS	AB=0.774;AC=9;AF=0.161;AN=56;BaseQRankSum=11.972;DP=667;FS=2.996;HRun=0;HaplotypeScore=180.8113;InbreedingCoeff=0.8598;MQ=57.68;MQ0=10;MQRankSum=-10.814;QD=24.09;ReadPosRankSum=-0.163;VQSLOD=3.2655;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,7:24:21.42:336,0,21	0/0:4,0:4:12.04:0,12,335	0/0:36,0:13:33.03:0,33,536	0/0:32,0:14:37.12:0,37,640	0/0:24,0:24:72.25:0,72,1704	0/0:26,0:26:66.19:0,66,1563	0/0:19,0:19:57.20:0,57,1337	1/1:21,0:21:62.85:748,63,0	0/0:21,0:21:60.21:0,60,1524	0/0:26,0:26:72.24:0,72,1870	0/0:22,0:22:66.23:0,66,1712	0/0:31,0:31:90.31:0,90,2303	0/0:28,0:28:84.29:0,84,2204	0/0:22,0:22:66.23:0,66,1670	0/0:28,0:28:75.26:0,75,1853	0/0:24,0:24:72.25:0,72,1867	0/0:25,0:25:69.24:0,69,1844	0/0:15,0:15:42.14:0,42,1012	1/1:10,0:11:20.94:224,21,0	1/1:18,0:18:24.07:364,24,0	0/0:39,0:39:99:0,112,2700	0/0:19,0:18:45.12:0,45,1078	0/0:20,0:20:60.19:0,60,1549	0/0:21,0:21:60.20:0,60,1548	0/0:27,0:27:69.24:0,69,1812	0/0:47,0:47:99:0,138,3381	1/1:19,0:19:50.88:734,51,0	0/0:18,0:18:54.18:0,54,1372
chr10	89397146	.	T	TA	2861.16	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=6.433;DP=650;FS=13.386;HRun=0;HaplotypeScore=146.0776;InbreedingCoeff=0.8018;MQ=63.53;MQ0=1;MQRankSum=-7.768;QD=18.22;ReadPosRankSum=-4.728;VQSLOD=3.3628;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:51.44:0,51,307	0/0:6,0:6:16.65:0,17,77	0/0:18,0:11:30.04:0,30,376	0/0:18,0:13:36.12:0,36,502	0/0:24,0:24:53.27:0,53,244	0/0:23,0:23:32.72:0,33,228	0/0:20,0:20:50:0,50,220	1/1:8,32:40:93.35:1140,93,0	0/0:23,0:23:56.47:0,56,272	0/0:19,0:19:57.19:0,57,780	0/0:17,0:17:51.17:0,51,706	0/1:29,0:29:0.39:0,0,219	0/0:25,0:25:75.23:0,75,1029	0/1:22,0:22:14.86:15,0,145	0/0:24,0:24:12.08:0,12,232	0/0:21,0:21:63.19:0,63,850	0/0:23,0:23:55.42:0,55,289	0/0:15,0:15:37.10:0,37,181	1/1:1,17:18:47.69:549,48,0	1/1:2,22:24:60.10:671,60,0	0/0:39,0:39:79.52:0,80,419	0/0:21,0:20:50.55:0,51,239	0/0:21,0:21:63.19:0,63,842	0/0:24,0:24:72.22:0,72,973	0/0:27,0:27:33.55:0,34,262	0/0:41,0:41:99:0,123,1654	1/1:5,19:24:54.16:649,54,0	0/0:19,0:19:57.14:0,57,728
chr10	89400035	.	A	AT	2912.45	PASS	AB=0.957;AC=21;AF=0.375;AN=56;BaseQRankSum=-9.347;DP=512;FS=4.413;HRun=11;HaplotypeScore=74.3580;InbreedingCoeff=0.9008;MQ=69.24;MQ0=1;MQRankSum=3.627;QD=16.64;ReadPosRankSum=0.959;VQSLOD=4.6328;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:29:46.84:0,47,135	0/0:11,0:11:26.39:0,26,206	0/1:19,0:10:3.69:22,0,4	0/0:21,0:12:15.82:0,16,126	1/1:0,25:26:68.91:671,69,0	1/1:2,14:16:6.82:251,7,0	1/1:5,7:12:16.28:155,16,0	0/0:3,0:21:36.66:0,37,107	1/1:2,15:17:39.08:396,39,0	0/0:33,0:33:80.63:0,81,625	0/0:21,0:21:32.44:0,32,326	1/1:3,9:12:18.04:183,18,0	0/0:20,0:20:44.80:0,45,345	1/1:2,8:11:32.88:307,33,0	0/0:14,0:14:34.91:0,35,261	0/0:10,0:10:26.89:0,27,209	0/0:21,0:21:41.76:0,42,318	1/1:3,16:18:18.85:373,19,0	0/0:5,0:15:22.87:0,23,67	0/0:5,0:24:40.73:0,41,120	1/1:2,1:3:3.01:30,3,0	1/1:3,9:13:23.94:220,24,0	0/0:17,0:17:38.78:0,39,297	0/0:12,0:12:29.80:0,30,223	1/1:4,20:24:51.10:518,51,0	0/0:26,0:26:56.73:0,57,441	0/0:6,0:19:36.67:0,37,108	0/0:20,0:21:52.64:0,53,379
chr10	89400060	.	C	CT	2632.84	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=-0.992;DP=507;FS=4.641;HRun=10;HaplotypeScore=70.4934;InbreedingCoeff=0.8405;MQ=63.42;MQ0=6;MQRankSum=-4.543;QD=17.44;ReadPosRankSum=-1.482;VQSLOD=3.7869;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:62.64:0,63,514	1/1:0,8:9:26.90:270,27,0	0/0:28,0:10:0.86:0,1,57	0/1:20,0:11:31.20:31,0,55	0/0:24,0:25:55.88:0,56,435	0/0:15,0:15:23.80:0,24,197	0/0:10,0:10:18.62:0,19,169	1/1:10,21:29:60.11:621,60,0	0/0:22,0:22:56.92:0,57,467	0/0:32,0:33:77.86:0,78,639	0/0:21,0:21:53.90:0,54,441	0/0:13,0:13:23.95:0,24,193	0/0:14,0:15:34.99:0,35,277	0/0:10,0:10:24.44:0,24,198	1/1:5,5:9:15.04:160,15,0	0/0:14,0:14:35.93:0,36,292	1/1:1,15:16:39.10:415,39,0	0/0:16,0:15:35.95:0,36,294	1/1:6,10:17:31.93:300,32,0	1/1:5,14:19:23.40:433,23,0	0/1:1,0:1:0:0,0,0	0/0:14,0:14:29.90:0,30,237	0/0:15,0:16:40.97:0,41,321	0/0:10,0:10:23.97:0,24,197	0/0:24,0:24:44.92:0,45,369	0/0:20,0:20:50.93:0,51,419	1/1:7,20:27:32.69:597,33,0	0/0:21,0:21:56.91:0,57,468
chr10	89401705	.	TA	T	1604.60	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.325;DP=637;FS=1.131;HRun=3;HaplotypeScore=63.4745;InbreedingCoeff=0.9966;MQ=81.10;MQ0=0;MQRankSum=0.056;QD=26.30;ReadPosRankSum=3.793;VQSLOD=2.8966;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.16:0,60,855	1/1:1,11:12:33.98:373,34,0	0/0:19,0:20:56.82:0,57,785	0/0:21,0:21:17.68:0,18,691	0/0:39,0:39:99:0,114,1663	0/0:36,0:36:99:0,108,1564	0/0:19,0:19:54.18:0,54,808	0/0:36,0:36:99:0,105,1572	0/0:19,0:19:57.19:0,57,853	0/0:24,0:24:72.24:0,72,1056	0/0:21,0:21:63.21:0,63,939	0/0:20,0:20:57.19:0,57,852	0/0:22,0:22:63.21:0,63,943	0/0:19,0:19:54.16:0,54,771	1/1:0,23:23:63.18:728,63,0	0/0:17,0:17:51.17:0,51,750	1/1:3,23:26:57.16:647,57,0	0/0:16,0:16:48.16:0,48,712	0/0:20,0:20:57.19:0,57,853	0/0:32,0:32:90.26:0,90,1304	0/0:21,0:21:63.20:0,63,925	0/0:19,0:19:57.19:0,57,835	0/0:27,0:27:75.25:0,75,1123	0/0:23,0:23:69.23:0,69,1031	0/0:19,0:19:57.15:0,57,813	0/0:26,0:26:78.26:0,78,1167	0/0:28,0:28:81.27:0,81,1214	0/0:11,0:11:30.10:0,30,444
chr10	89402462	.	TTA	T	1230.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.282;DP=765;FS=1.519;HRun=0;HaplotypeScore=85.4904;InbreedingCoeff=0.9825;MQ=65.27;MQ0=3;MQRankSum=0.239;QD=35.17;ReadPosRankSum=2.863;VQSLOD=6.1374;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:87.30:1326,87,0	0/0:8,0:8:24.08:0,24,463	0/0:24,0:22:63.22:0,63,1176	0/0:21,0:19:57.17:0,57,1057	0/0:30,0:30:90.31:0,90,1723	0/0:16,0:16:48.16:0,48,927	0/0:18,0:18:51.17:0,51,983	0/0:34,0:34:96.32:0,96,1802	0/0:40,0:40:99:0,117,2234	0/0:47,0:47:99:0,141,2681	0/0:18,0:18:54.15:0,54,975	0/0:29,0:29:87.30:0,87,1638	0/0:35,0:35:99:0,102,1904	0/0:24,0:24:72.25:0,72,1376	0/0:42,0:42:99:0,126,2359	0/0:30,0:30:90.29:0,90,1688	0/0:36,0:36:99:0,108,2054	0/0:7,0:7:15.05:0,15,289	0/0:15,0:14:42.14:0,42,780	0/0:24,0:24:69.24:0,69,1320	0/0:33,0:33:99:0,99,1897	0/0:38,0:38:99:0,102,1936	0/0:28,0:28:81.28:0,81,1540	0/0:30,0:30:87.30:0,87,1680	0/0:15,0:15:45.15:0,45,869	0/0:34,0:34:99:0,102,1959	0/0:40,0:40:99:0,117,2199	0/0:14,0:14:42.14:0,42,811
chr10	89402669	.	GTTTTTT	G	330.14	PASS	AB=0.987;AC=6;AF=0.107;AN=56;BaseQRankSum=2.401;DP=609;FS=0.000;HRun=16;HaplotypeScore=180.3743;InbreedingCoeff=0.5782;MQ=60.79;MQ0=10;MQRankSum=-4.014;QD=3.67;ReadPosRankSum=1.965;VQSLOD=-0.2586;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,7:26:15.70:251,16,0	0/1:5,0:5:5.32:18,0,5	0/0:33,0:17:31.47:0,31,386	0/0:31,0:12:17.50:0,18,130	0/0:28,0:28:59.16:0,59,1329	0/0:22,0:21:47.95:0,48,888	0/0:8,0:8:18.01:0,18,373	0/0:29,0:23:35.73:0,36,277	0/0:29,0:29:68.36:0,68,1314	0/0:31,0:33:89.83:0,90,1470	0/0:25,0:28:66.14:0,66,1472	0/0:17,0:17:40.92:0,41,734	0/0:11,0:9:27.09:0,27,756	0/0:14,0:14:36.12:0,36,819	1/1:21,0:21:2.13:93,2,0	0/0:14,0:14:36.46:0,36,791	0/1:37,0:38:90.65:91,0,105	0/0:11,0:11:29.96:0,30,532	0/0:21,0:21:38.84:0,39,514	0/0:28,0:28:57.74:0,58,516	0/0:20,0:18:38.48:0,38,635	0/0:17,0:17:38.96:0,39,576	0/0:23,0:24:54.10:0,54,1164	0/0:13,0:14:36.09:0,36,665	0/0:26,0:26:58.41:0,58,1169	0/0:20,0:20:51.09:0,51,896	0/0:21,0:20:37.66:0,38,360	0/0:15,0:17:48.14:0,48,1158
chr10	89402677	.	T	TG	1046.99	PASS	AB=0.976;AC=13;AF=0.232;AN=56;BaseQRankSum=2.758;DP=630;FS=5.220;HRun=0;HaplotypeScore=137.9605;InbreedingCoeff=0.4150;MQ=60.13;MQ0=18;MQRankSum=3.670;QD=4.72;ReadPosRankSum=1.259;VQSLOD=3.3933;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:67.81:0,68,552	0/0:5,0:5:14.99:0,15,136	0/0:40,0:17:20.20:0,20,215	0/1:40,0:15:1.30:1,0,42	0/1:25,1:26:8.42:126,0,8	0/0:23,0:22:51.46:0,51,447	0/0:7,0:7:21:0,21,226	0/0:30,0:21:46.85:0,47,399	0/1:28,1:28:16.75:159,0,17	0/0:39,0:38:99:0,107,1057	0/0:27,0:27:76.01:0,76,791	0/1:16,2:18:8.88:163,0,9	0/0:11,0:9:26.46:0,26,262	1/1:11,2:12:16.63:155,17,0	0/1:20,0:20:29.04:29,0,99	0/0:13,0:13:35.29:0,35,359	0/0:40,0:40:44.67:0,45,407	0/1:12,0:12:8.32:68,0,8	0/0:23,0:20:50.52:0,51,383	0/0:27,0:27:64.61:0,65,520	1/1:19,1:18:7.82:195,8,0	0/1:18,0:18:0.29:109,0,0	0/0:23,0:23:58.75:0,59,590	0/0:13,0:13:39:0,39,398	1/1:24,2:26:16.53:205,17,0	0/0:21,0:20:42.90:0,43,522	0/0:17,0:16:32.71:0,33,249	0/0:19,0:19:47.88:0,48,534
chr10	89402678	.	TTTTTTTTG	T	942.37	PASS	AB=0.864;AC=9;AF=0.161;AN=56;BaseQRankSum=1.424;DP=630;FS=7.542;HRun=0;HaplotypeScore=205.8709;InbreedingCoeff=0.5882;MQ=59.28;MQ0=18;MQRankSum=-2.869;QD=6.98;ReadPosRankSum=-1.947;VQSLOD=1.3594;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:12.45:239,12,0	1/1:6,0:6:10.31:171,10,0	0/0:39,0:16:31.85:0,32,295	0/0:40,0:15:23.80:0,24,171	0/0:28,0:28:15.41:0,15,1214	0/1:24,0:23:2.93:3,0,798	0/0:7,0:7:20.51:0,21,325	0/0:30,0:21:30.07:0,30,204	0/0:28,0:27:54.88:0,55,1192	0/0:39,0:38:99:0,110,2087	0/0:27,0:27:69.15:0,69,1803	0/0:18,0:18:0.06:0,0,620	0/0:12,0:10:30.07:0,30,859	0/0:13,0:12:36.12:0,36,803	1/1:3,17:20:21.07:384,21,0	0/0:13,0:13:34.36:0,34,789	0/1:12,27:39:17.47:286,0,17	0/0:12,0:12:29.09:0,29,475	0/0:24,0:21:20.07:0,20,412	0/0:26,0:26:45.98:0,46,433	0/0:20,0:18:38.21:0,38,541	0/1:18,0:18:3.78:4,0,447	0/0:24,0:24:61.75:0,62,1442	0/0:13,0:13:36.05:0,36,776	0/0:26,0:26:24.03:0,24,1007	0/0:20,0:19:50.57:0,51,1038	0/0:17,0:16:36.46:0,36,326	0/0:19,0:19:52.67:0,53,1362
chr10	89402682	.	TTTTG	T	2167.93	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=2.313;DP=623;FS=9.687;HRun=0;HaplotypeScore=160.6224;InbreedingCoeff=0.3837;MQ=58.47;MQ0=18;MQRankSum=-4.581;QD=6.41;ReadPosRankSum=-5.827;VQSLOD=-0.4122;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:1.19:136,0,1	1/1:7,0:7:16.43:110,16,0	0/0:38,0:16:14.34:0,14,152	0/0:37,0:13:16.48:0,16,140	0/1:27,0:27:29.35:29,0,354	0/1:23,0:22:75.39:75,0,167	0/1:8,0:8:39.02:39,0,93	1/1:28,1:20:33.84:310,34,0	0/0:28,0:27:31.82:0,32,347	0/0:39,0:38:78.29:0,78,1081	0/0:25,0:25:62.69:0,63,902	0/1:18,0:18:60.81:61,0,166	0/0:14,0:12:23.91:0,24,421	0/0:13,0:12:29.86:0,30,219	1/1:20,0:20:20.93:189,21,0	0/1:13,0:13:1.01:1,0,312	1/1:37,0:37:9.28:153,9,0	0/0:12,0:12:11.33:0,11,114	1/1:20,3:20:44.86:401,45,0	1/1:22,4:26:52.04:504,52,0	0/1:19,0:17:7.39:7,0,109	0/1:19,0:19:67.15:67,0,83	0/0:24,0:24:50.07:0,50,715	0/0:12,0:12:31.15:0,31,375	0/1:25,0:25:39.70:40,0,216	0/0:22,0:21:16.75:0,17,524	1/1:15,2:16:11.37:239,11,0	0/0:20,0:20:32.02:0,32,726
chr10	89402683	.	TTTG	T	2208.55	PASS	AB=0.998;AC=27;AF=0.482;AN=56;BaseQRankSum=3.687;DP=612;FS=4.086;HRun=0;HaplotypeScore=149.2272;InbreedingCoeff=0.1981;MQ=57.83;MQ0=18;MQRankSum=-3.632;QD=5.62;ReadPosRankSum=-5.364;VQSLOD=0.9982;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:1.97:144,2,0	1/1:7,0:7:17.21:113,17,0	0/1:35,1:16:5.78:6,0,122	0/0:35,0:12:16.46:0,16,134	0/1:27,0:27:45.36:45,0,146	0/1:22,0:21:40.42:99,0,40	0/1:8,0:8:34.58:35,0,43	1/1:28,0:19:35.90:321,36,0	0/0:26,0:25:3.84:0,4,141	0/0:39,0:38:76.60:0,77,923	0/0:25,0:25:60.54:0,61,718	0/1:18,0:18:65.62:86,0,66	0/0:15,0:13:30.70:0,31,350	0/1:14,0:13:8.47:8,0,67	1/1:20,0:20:20.91:168,21,0	0/1:12,0:12:2.36:2,0,238	1/1:36,0:36:10.38:151,10,0	0/1:11,0:11:4.70:5,0,35	1/1:21,2:20:44.60:364,45,0	1/1:23,2:25:54.60:470,55,0	0/1:19,0:17:23.44:23,0,25	0/1:17,0:17:25.68:83,0,26	0/0:24,0:24:50.48:0,50,617	0/0:12,0:12:29.72:0,30,314	0/1:25,0:25:55.78:73,0,56	0/0:22,0:21:34.41:0,34,480	1/1:14,3:16:3.87:197,4,0	0/0:20,0:20:31.81:0,32,604
chr10	89402685	.	TG	T	4537.72	PASS	AB=0.970;AC=40;AF=0.714;AN=56;BaseQRankSum=11.817;DP=588;FS=31.638;HRun=1;HaplotypeScore=120.1225;InbreedingCoeff=0.6645;MQ=53.38;MQ0=18;MQRankSum=-4.591;QD=10.41;ReadPosRankSum=1.093;VQSLOD=1.2216;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:51.28:247,51,0	1/1:7,0:7:19.54:151,20,0	0/1:29,2:12:7.89:8,0,107	0/0:31,1:9:16.42:0,16,120	1/1:27,0:27:63.97:336,64,0	1/1:21,2:22:53.43:365,53,0	1/1:7,0:7:18.24:102,18,0	1/1:24,4:20:45.02:320,45,0	1/1:25,1:25:47.96:278,48,0	0/0:34,0:33:22.02:0,22,517	0/0:24,0:24:20.02:0,20,365	1/1:17,0:17:40.64:266,41,0	0/1:15,1:14:15.28:15,0,173	1/1:13,1:13:33.92:187,34,0	1/1:18,2:20:20.48:125,20,0	0/1:12,0:12:16.13:16,0,84	1/1:33,2:35:26.29:202,26,0	1/1:11,0:11:24.88:147,25,0	1/1:20,3:20:45.82:344,46,0	1/1:24,1:25:57.47:362,57,0	1/1:19,0:17:42.89:260,43,0	1/1:15,0:15:36.76:235,37,0	0/0:24,0:24:8.01:0,8,330	0/1:11,0:11:6.48:6,0,145	1/1:24,1:25:58.19:391,58,0	0/0:19,0:18:19.57:0,20,338	1/1:15,2:16:23.98:175,24,0	0/0:18,0:18:19.53:0,20,348
chr10	89402686	.	GT	G	259.42	PASS	AB=0.945;AC=8;AF=0.143;AN=56;BaseQRankSum=6.357;DP=601;FS=0.547;HRun=16;HaplotypeScore=139.8973;InbreedingCoeff=-0.1027;MQ=53.30;MQ0=18;MQRankSum=-5.776;QD=1.36;ReadPosRankSum=2.438;VQSLOD=-0.3430;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,16:27:14.51:300,0,15	0/1:7,0:7:1.12:1,0,26	0/1:31,0:12:9.06:9,0,115	0/0:32,0:9:16.52:0,17,155	0/0:27,0:27:45.33:0,45,275	0/0:24,0:23:19.92:0,20,135	0/0:7,0:7:13.61:0,14,85	0/0:29,0:21:5.23:0,5,69	0/0:27,0:26:45.51:0,46,302	0/0:32,0:31:82.47:0,82,1000	0/0:25,0:25:64.28:0,64,774	0/0:17,0:17:29.18:0,29,152	0/0:16,0:14:20.40:0,20,404	0/0:15,0:14:17.62:0,18,147	0/1:22,0:22:11.04:11,0,37	0/0:13,0:13:35.24:0,35,308	0/1:34,0:35:13.12:35,0,13	0/0:13,0:13:22.37:0,22,121	0/1:21,1:19:10.19:10,0,12	0/1:24,0:26:8.04:8,0,75	0/0:18,0:16:30.20:0,30,136	0/0:17,0:17:22.89:0,23,145	0/0:22,0:22:48.95:0,49,623	0/0:11,0:11:25.09:0,25,338	0/0:27,0:27:38.66:0,39,254	0/0:20,0:19:56.65:0,57,667	0/1:21,0:18:0.75:1,0,102	0/0:18,0:18:48.07:0,48,612
chr10	89402698	.	G	GT	5221.72	PASS	AB=0.750;AC=27;AF=0.482;AN=56;BaseQRankSum=7.743;DP=569;FS=4.099;HRun=6;HaplotypeScore=113.4804;InbreedingCoeff=0.9064;MQ=56.49;MQ0=14;MQRankSum=-2.449;QD=18.52;ReadPosRankSum=1.519;VQSLOD=3.9338;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:45.57:0,46,283	0/0:6,0:6:14.33:0,14,74	0/0:23,0:10:18.38:0,18,178	0/0:25,0:9:9.98:0,10,78	1/1:8,19:28:35.40:538,35,0	1/1:8,15:22:36.25:420,36,0	0/1:4,2:6:17.87:63,0,18	1/1:11,19:22:37.68:415,38,0	1/1:7,16:22:29.94:364,30,0	0/0:28,0:27:78.17:0,78,861	0/0:26,0:26:72.02:0,72,786	1/1:3,13:16:35.96:405,36,0	0/0:16,0:14:19.69:0,20,337	1/1:10,9:18:31.13:351,31,0	0/0:25,0:25:40.75:0,41,243	0/0:13,0:13:24.03:0,24,259	0/0:31,0:31:22.16:0,22,145	1/1:3,7:12:8.71:199,9,0	1/1:11,5:15:20.68:216,21,0	1/1:7,17:24:52.86:531,53,0	1/1:8,6:12:15.05:186,15,0	1/1:3,14:17:32.95:354,33,0	0/0:21,0:22:42.70:0,43,458	0/0:11,0:11:28.29:0,28,298	1/1:5,27:32:60.19:738,60,0	0/0:19,0:19:56.56:0,57,592	1/1:5,17:19:41.27:444,41,0	0/0:17,0:17:33.87:0,34,507
chr10	89403093	.	G	GT	2113.27	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-11.089;DP=504;FS=0.950;HRun=10;HaplotypeScore=85.1979;InbreedingCoeff=0.8309;MQ=73.98;MQ0=15;MQRankSum=0.132;QD=18.70;ReadPosRankSum=-2.627;VQSLOD=3.2564;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:22:19.62:0,20,165	0/0:3,0:3:5.72:0,6,30	0/0:27,0:17:26.21:0,26,176	0/0:27,0:16:21.66:0,22,133	0/0:25,0:25:2.66:0,3,229	0/0:30,0:29:73.88:0,74,318	0/0:10,0:10:14.59:0,15,78	1/1:8,20:27:60.13:624,60,0	0/0:13,0:13:33.16:0,33,140	0/0:14,0:16:40.98:0,41,323	0/0:24,0:24:65.92:0,66,541	0/0:20,0:20:39.99:0,40,165	0/0:15,0:15:41.95:0,42,344	0/0:8,0:8:21.59:0,22,92	0/0:10,0:9:18.62:0,19,77	0/0:16,0:16:44.93:0,45,366	0/0:11,0:13:25.65:0,26,103	0/0:13,0:13:30.44:0,30,138	1/1:5,17:21:54.14:575,54,0	1/1:7,19:25:32.46:537,32,0	0/0:9,0:11:19.61:0,20,79	0/0:12,0:12:29.57:0,30,138	0/0:24,0:25:55.93:0,56,444	0/0:11,0:11:32.96:0,33,271	0/1:12,0:12:2.66:3,0,74	0/0:20,0:22:58.01:0,58,455	1/1:5,17:24:35.16:534,35,0	0/0:6,0:7:20.02:0,20,154
chr10	89403112	.	C	CAA	776.34	PASS	AB=0.739;AC=5;AF=0.089;AN=56;BaseQRankSum=-0.780;DP=617;FS=2.876;HRun=7;HaplotypeScore=112.5611;InbreedingCoeff=-0.0872;MQ=65.65;MQ0=31;MQRankSum=3.215;QD=6.52;ReadPosRankSum=-0.413;VQSLOD=-0.2615;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:78.22:0,78,905	0/1:2,4:6:22.88:135,0,23	0/1:42,0:19:3.92:4,0,80	0/1:34,0:17:22.06:22,0,22	0/0:32,0:30:78.13:0,78,887	0/0:31,0:30:78.17:0,78,882	0/0:9,0:9:21.05:0,21,244	0/0:33,0:32:78.01:0,78,833	0/0:13,0:13:33.09:0,33,384	0/0:25,0:25:62.95:0,63,721	0/0:34,0:32:93.05:0,93,1040	0/0:18,0:18:48.12:0,48,546	0/0:19,0:17:45.12:0,45,515	0/0:11,0:10:27.08:0,27,312	0/1:7,9:12:39.72:364,0,40	0/0:19,0:18:48.10:0,48,544	0/1:4,12:16:39.69:364,0,40	0/0:13,0:13:33.10:0,33,384	0/0:21,0:20:54.10:0,54,601	0/0:34,0:30:78.20:0,78,896	0/0:10,0:9:27.08:0,27,314	0/0:19,0:18:48.13:0,48,557	0/0:26,0:24:51.12:0,51,582	0/0:13,0:13:30.07:0,30,349	0/0:15,0:15:42.12:0,42,489	0/0:28,0:26:72.19:0,72,827	0/0:29,0:26:69.12:0,69,783	0/0:17,0:16:45.04:0,45,473
chr10	89404020	.	A	AC	2488.62	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=-8.037;DP=644;FS=4.007;HRun=1;HaplotypeScore=44.9225;InbreedingCoeff=0.9626;MQ=47.05;MQ0=77;MQRankSum=-2.576;QD=21.45;ReadPosRankSum=-1.951;VQSLOD=3.1433;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:63.19:0,63,797	0/0:13,0:11:24.08:0,24,311	./.	0/0:23,0:3:5.05:0,5,40	0/0:38,0:30:69.22:0,69,895	0/0:18,0:15:30.09:0,30,380	0/0:19,0:14:33.11:0,33,428	1/1:6,28:11:30.10:447,30,0	0/0:22,0:18:42.14:0,42,543	0/0:32,0:30:90.29:0,90,1168	0/0:25,0:22:57.19:0,57,739	0/0:21,0:17:30.09:0,30,378	0/0:20,0:19:41.76:0,42,533	0/0:27,0:25:48.12:0,48,587	0/0:20,0:17:42.13:0,42,528	0/0:12,0:12:24.08:0,24,312	0/0:25,0:24:54.18:0,54,701	0/0:20,0:19:36.12:0,36,467	1/1:9,19:14:42.14:629,42,0	1/1:5,24:24:57.19:854,57,0	0/0:20,0:17:42.14:0,42,545	0/0:16,0:16:24.07:0,24,302	0/0:40,0:38:93.26:0,93,1188	0/0:22,0:22:51.12:0,51,643	0/0:14,0:12:24.08:0,24,312	0/0:20,0:19:57.13:0,57,708	1/1:3,22:24:48.16:717,48,0	0/0:14,0:10:24.08:0,24,311
chr10	89404174	.	C	CTTTTT	3875.72	PASS	AB=0.983;AC=39;AF=0.696;AN=56;BaseQRankSum=3.999;DP=675;FS=1.842;HRun=16;HaplotypeScore=127.1559;InbreedingCoeff=0.3182;MQ=46.91;MQ0=47;MQRankSum=-5.360;QD=6.65;ReadPosRankSum=-2.816;VQSLOD=-0.2480;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,1:34:14.90:194,15,0	1/1:7,0:14:17.19:178,17,0	0/1:21,0:8:5.28:5,0,89	0/0:24,0:10:15.37:0,15,132	1/1:41,0:37:17.93:412,18,0	1/1:21,0:14:25.04:195,25,0	1/1:20,0:7:9.47:100,9,0	1/1:31,0:13:9.02:110,9,0	1/1:22,0:18:19.19:290,19,0	0/1:34,0:27:44.89:45,0,152	0/0:22,0:18:1.33:0,1,117	1/1:18,0:11:16.87:166,17,0	0/0:19,0:17:8.70:0,9,75	1/1:19,0:15:15.26:197,15,0	1/1:16,0:23:20.70:300,21,0	0/0:15,0:15:22.14:0,22,333	1/1:26,1:26:18.88:174,19,0	1/1:12,0:8:5.20:141,5,0	0/1:37,0:23:11.97:363,0,12	1/1:23,0:19:9.90:98,10,0	0/0:11,0:8:6.98:0,7,35	1/1:16,0:13:17.96:151,18,0	0/1:26,0:26:46.21:46,0,256	0/1:15,0:17:13.40:13,0,270	1/1:24,0:22:30.53:154,31,0	0/1:34,0:36:99:150,0,368	1/1:26,0:25:26.37:362,26,0	0/1:15,0:13:32.68:33,0,107
chr10	89404184	.	T	TC	1418.23	PASS	AB=0.887;AC=22;AF=0.393;AN=56;BaseQRankSum=9.415;DP=684;FS=14.461;HRun=0;HaplotypeScore=84.1899;InbreedingCoeff=-0.5225;MQ=45.14;MQ0=49;MQRankSum=0.051;QD=2.73;ReadPosRankSum=7.316;VQSLOD=1.0458;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:41,9:38:99:214,0,102	0/1:12,3:13:57.84:58,0,71	0/0:25,0:8:19.34:0,19,144	0/0:19,0:8:17.40:0,17,111	0/1:36,3:34:52.27:52,0,193	0/0:17,0:11:26.59:0,27,201	0/0:21,0:8:8.91:0,9,61	0/0:29,1:17:1.24:0,1,193	0/0:23,0:17:21.70:0,22,152	0/0:29,1:25:27.59:0,28,511	0/1:20,3:21:40.79:41,0,134	0/1:19,1:13:51.41:79,0,51	0/1:13,1:12:11.85:12,0,135	0/1:16,1:13:15.30:15,0,78	0/1:21,4:22:80.63:81,0,113	0/1:13,2:14:29.17:29,0,348	0/1:24,7:27:89.05:169,0,89	0/1:12,3:8:47.73:54,0,48	0/1:34,4:23:99:164,0,259	0/1:22,4:21:60.64:61,0,85	1/1:11,1:8:11.69:86,12,0	0/1:16,2:16:30.83:31,0,126	0/1:26,3:26:18.09:18,0,405	0/1:19,1:19:9.29:9,0,384	0/1:18,4:20:99:106,0,146	0/1:37,7:40:99:163,0,675	0/1:21,4:23:81.76:82,0,151	0/1:19,2:15:56.60:57,0,154
chr10	89404189	.	TTCC	T	3196.51	PASS	AB=0.984;AC=25;AF=0.446;AN=56;BaseQRankSum=6.492;DP=666;FS=44.463;HRun=0;HaplotypeScore=88.9779;InbreedingCoeff=-0.8063;MQ=45.58;MQ0=50;MQRankSum=-0.078;QD=5.31;ReadPosRankSum=3.900;VQSLOD=0.3159;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:48,0:36:99:322,0,213	0/1:15,0:13:99:114,0,104	0/1:24,0:8:0.75:1,0,105	0/0:17,0:8:9.77:0,10,121	0/1:42,0:37:99:192,0,477	0/1:18,0:12:61.99:144,0,62	0/1:20,0:7:46.72:47,0,81	0/1:22,10:18:99:99,0,214	0/0:22,0:16:6.30:0,6,185	0/0:25,0:20:5.28:0,5,590	0/1:20,0:18:77.87:78,0,229	0/1:20,0:13:99:126,0,153	0/1:16,0:14:13.26:13,0,270	0/1:20,0:16:28.86:29,0,207	0/1:23,2:22:99:260,0,115	0/1:16,0:15:38.14:38,0,576	0/1:29,0:25:99:247,0,258	0/1:14,0:7:77.30:77,0,94	0/1:33,1:19:99:269,0,227	0/1:23,0:18:22.73:114,0,23	0/1:11,0:7:29.01:136,0,29	0/1:18,0:17:53.58:54,0,271	0/1:28,0:25:33.24:33,0,584	0/1:19,0:18:25.04:25,0,555	0/1:23,0:21:60.11:202,0,60	0/1:42,0:38:99:357,0,828	0/1:24,2:24:99:240,0,351	0/1:19,0:13:99:129,0,196
chr10	89404190	.	TCC	T	4470.27	PASS	AB=0.806;AC=25;AF=0.446;AN=56;BaseQRankSum=5.851;DP=627;FS=71.624;HRun=2;HaplotypeScore=75.8620;InbreedingCoeff=-0.8197;MQ=46.53;MQ0=50;MQRankSum=-0.607;QD=7.88;ReadPosRankSum=4.716;VQSLOD=-0.4696;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:36,11:35:99:421,0,205	0/1:11,3:12:62.26:112,0,62	0/1:22,1:8:20.62:21,0,95	0/0:17,0:8:9.76:0,10,103	0/1:20,21:36:99:280,0,429	0/1:16,1:11:58.20:223,0,58	0/1:14,2:6:63.87:64,0,71	0/1:25,3:16:99:118,0,214	0/0:12,6:13:14.53:0,15,154	0/0:24,1:20:8.35:0,8,613	0/1:12,6:16:99:126,0,205	0/1:17,1:13:99:152,0,143	0/1:14,1:13:20.27:20,0,273	0/1:13,1:15:49.22:49,0,183	0/1:15,8:20:82.38:324,0,82	0/1:13,3:15:57.30:57,0,480	0/1:16,11:23:99:318,0,228	0/1:8,6:7:74.52:108,0,75	0/1:27,4:18:99:286,0,247	0/1:8,15:18:21.15:170,0,21	0/1:6,5:7:29.01:174,0,29	0/1:8,8:15:99:101,0,251	0/1:24,3:24:76.81:77,0,520	0/1:18,1:18:45.50:46,0,460	0/1:16,5:20:39.68:315,0,40	0/1:31,9:36:99:454,0,750	0/1:14,12:24:99:296,0,344	0/1:12,3:9:99:158,0,180
chr10	89404343	.	AT	A	4319.13	PASS	AB=0.726;AC=23;AF=0.411;AN=56;BaseQRankSum=17.720;DP=862;FS=2.108;HRun=7;HaplotypeScore=111.6811;InbreedingCoeff=-0.6939;MQ=54.42;MQ0=15;MQRankSum=-8.585;QD=5.47;ReadPosRankSum=1.254;VQSLOD=1.3995;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:35,28:60:99:491,0,940	0/0:4,6:4:6.02:0,6,75	0/0:12,0:12:16.92:0,17,319	0/0:12,0:12:27.06:0,27,311	0/1:32,25:38:83.21:83,0,919	0/0:16,0:16:48.12:0,48,586	0/0:23,0:23:63.19:0,63,778	0/1:40,25:65:99:582,0,1076	0/1:18,11:27:99:176,0,484	0/1:16,13:21:71.30:71,0,427	0/1:17,15:23:99:149,0,465	0/1:10,10:20:99:191,0,302	0/1:23,10:29:71.05:71,0,725	0/1:16,9:23:99:146,0,482	0/1:23,10:32:99:139,0,578	0/1:18,8:22:31.60:32,0,581	0/1:22,10:32:99:249,0,571	0/1:24,13:35:99:188,0,666	0/1:25,16:37:99:328,0,514	0/1:26,17:30:4.11:4,0,882	0/1:13,9:22:99:182,0,412	0/1:15,4:18:43.63:44,0,429	0/1:23,9:29:99:101,0,708	0/1:19,11:29:99:220,0,583	0/1:15,11:23:99:178,0,458	0/1:23,22:41:99:435,0,583	0/1:19,15:31:99:233,0,452	0/1:10,6:12:27.92:28,0,307
chr10	89406795	.	C	CA	1631.14	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-11.422;DP=719;FS=0.000;HRun=6;HaplotypeScore=65.4663;InbreedingCoeff=0.9994;MQ=83.14;MQ0=0;MQRankSum=-2.446;QD=28.12;ReadPosRankSum=2.645;VQSLOD=4.2668;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.19:0,96,970	1/1:0,10:10:30.10:377,30,0	0/0:22,0:22:54.11:0,54,547	0/0:18,0:18:42.08:0,42,420	0/0:21,0:21:63.13:0,63,636	0/0:20,0:20:51.11:0,51,520	0/0:20,0:20:54.12:0,54,551	0/0:30,0:30:75.15:0,75,755	0/0:23,0:23:63.11:0,63,629	0/0:38,0:38:99:0,102,1036	0/0:24,0:24:66.14:0,66,673	0/0:23,0:23:63.14:0,63,643	0/0:27,0:27:81.17:0,81,820	0/0:26,0:26:75.13:0,75,750	1/1:4,24:28:66.21:830,66,0	0/0:38,0:38:99:0,108,1094	1/1:5,15:20:45.14:566,45,0	0/0:15,0:15:27.06:0,27,275	0/0:25,0:25:69.09:0,69,681	0/0:26,0:26:69.12:0,69,694	0/0:46,0:46:99:0,126,1284	0/0:25,0:25:72.16:0,72,735	0/0:29,0:29:72.16:0,72,734	0/0:30,0:30:87.16:0,87,877	0/0:28,0:28:72.14:0,72,727	0/0:34,0:34:90.18:0,90,907	0/0:24,0:24:63.08:0,63,625	0/0:13,0:13:39.09:0,39,398
chr10	89410145	.	A	AATACACAC	1932.64	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-1.845;DP=495;FS=13.772;HRun=0;HaplotypeScore=136.2544;InbreedingCoeff=0.8413;MQ=65.36;MQ0=8;MQRankSum=-4.377;QD=12.00;ReadPosRankSum=-3.293;VQSLOD=1.0539;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:28:35.10:35,0,132	1/1:0,8:9:3.01:128,3,0	0/0:33,0:25:57.04:0,57,564	0/0:30,0:23:56.92:0,57,560	0/0:13,0:13:32.97:0,33,344	0/0:14,0:14:24.49:0,24,347	0/0:21,0:21:48.03:0,48,687	1/1:29,0:28:51.03:520,51,0	0/0:7,0:7:14.88:0,15,239	0/0:10,0:10:23.17:0,23,172	0/0:13,0:14:32.93:0,33,289	0/0:14,0:14:34.30:0,34,390	0/0:15,0:15:38.90:0,39,513	0/0:18,0:19:41.79:0,42,532	1/1:3,8:14:6.41:199,6,0	0/0:23,0:23:63.04:0,63,932	1/1:26,0:25:20.66:578,21,0	0/0:18,0:17:44.95:0,45,654	1/1:17,0:17:29.89:273,30,0	1/1:22,0:20:26.92:239,27,0	0/0:26,0:26:53.93:0,54,491	0/0:11,0:11:24.41:0,24,264	0/0:12,0:12:26.17:0,26,254	0/0:26,0:26:66.06:0,66,1219	0/0:14,0:13:27.01:0,27,371	0/0:7,0:7:11.94:0,12,158	1/1:15,0:15:11.98:148,12,0	0/0:7,0:7:21.03:0,21,433
chr10	89410147	.	TAC	T	867.44	PASS	AB=0.688;AC=17;AF=0.327;AN=52;BaseQRankSum=4.705;DP=532;FS=1.422;HRun=0;HaplotypeScore=85.0712;InbreedingCoeff=0.7130;MQ=64.30;MQ0=9;MQRankSum=2.715;QD=6.02;ReadPosRankSum=1.131;VQSLOD=3.1541;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:33:18.01:0,18,173	0/0:9,0:9:3:0,3,27	./.	./.	1/1:10,3:13:9.02:99,9,0	1/1:9,0:14:11.36:56,11,0	0/1:12,0:22:6.10:86,0,6	0/0:28,0:27:10.26:0,10,96	1/1:4,3:8:17.66:145,18,0	0/0:12,0:13:12.89:0,13,111	0/0:18,0:17:11.86:0,12,132	1/1:12,3:15:0.07:190,0,0	0/0:16,0:16:30.02:0,30,375	1/1:11,10:21:20.76:211,21,0	0/0:17,0:17:8.15:0,8,71	0/0:27,0:28:43.02:0,43,590	0/0:26,0:25:3.22:0,3,102	0/0:19,0:20:29.96:0,30,378	0/0:20,0:20:10.64:0,11,70	0/0:23,0:21:8.99:0,9,76	1/1:26,0:27:5.84:47,6,0	1/1:7,3:10:9.02:99,9,0	0/0:10,0:11:9.02:0,9,112	0/0:28,0:28:51.13:0,51,717	1/1:8,5:13:11.87:113,12,0	0/0:10,0:10:20.87:0,21,214	0/0:16,0:16:8.91:0,9,63	0/0:7,0:7:15.05:0,15,225
chr10	89410153	.	C	CAT	875.17	PASS	AB=0.990;AC=10;AF=0.179;AN=56;BaseQRankSum=-0.536;DP=566;FS=0.000;HRun=0;HaplotypeScore=93.8935;InbreedingCoeff=0.3695;MQ=60.13;MQ0=14;MQRankSum=-2.025;QD=6.68;ReadPosRankSum=1.781;VQSLOD=3.2354;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:13.09:0,13,155	1/1:8,0:8:3.01:31,3,0	0/0:32,0:23:60.02:0,60,585	0/0:33,0:20:56.92:0,57,560	0/0:17,0:17:41.90:0,42,334	0/0:15,0:15:23.69:0,24,184	0/0:24,0:24:56.78:0,57,453	0/1:25,0:24:60.82:335,0,61	0/0:11,0:11:32.53:0,33,251	0/0:18,0:18:23.45:0,23,354	0/0:19,0:18:41.86:0,42,351	0/0:19,0:19:44.03:0,44,343	0/0:18,0:18:50.95:0,51,530	0/0:21,0:21:44.87:0,45,355	0/1:18,0:18:49.56:50,0,59	0/0:29,0:29:80.94:0,81,860	0/1:23,1:23:25.59:189,0,26	0/0:23,0:22:37.12:0,37,542	0/1:19,0:18:63.14:196,0,63	1/1:21,0:19:21.22:168,21,0	0/0:33,0:33:62.87:0,63,509	0/0:10,0:10:26.92:0,27,212	0/0:14,0:14:17.38:0,17,290	0/0:26,0:26:75.07:0,75,903	0/0:14,0:13:29.93:0,30,240	0/0:10,0:10:26.72:0,27,247	1/1:5,11:16:0.65:50,1,0	0/0:13,0:13:35.98:0,36,391
chr10	89410271	.	G	GTT	4421.86	PASS	AB=0.756;AC=34;AF=0.607;AN=56;BaseQRankSum=1.107;DP=588;FS=7.020;HRun=11;HaplotypeScore=74.3038;InbreedingCoeff=0.6481;MQ=69.76;MQ0=14;MQRankSum=0.960;QD=12.32;ReadPosRankSum=-1.868;VQSLOD=2.6250;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,2:20:31.79:296,32,0	1/1:3,0:3:9.01:100,9,0	0/0:58,0:15:11.50:0,12,71	0/0:47,0:20:0.14:0,0,112	1/1:3,21:24:57.86:655,58,0	0/1:11,16:27:1.76:277,0,2	1/1:5,18:23:30.06:391,30,0	1/1:6,1:18:5.02:198,5,0	1/1:4,6:11:12.04:173,12,0	0/0:11,0:11:14.92:0,15,144	0/0:21,0:21:35.80:0,36,331	1/1:5,9:17:9.94:101,10,0	0/0:10,0:10:20.99:0,21,203	1/1:5,12:18:9.40:92,9,0	1/1:5,7:13:18.06:258,18,0	0/0:20,0:20:38.94:0,39,369	1/1:5,23:29:54.14:746,54,0	1/1:6,15:21:18.05:243,18,0	0/1:15,1:18:16.99:120,0,17	1/1:3,0:20:7.88:106,8,0	1/1:12,4:17:7.32:270,7,0	1/1:2,15:15:23.86:260,24,0	0/1:19,0:19:0.38:0,0,249	0/0:20,0:20:51.05:0,51,494	1/1:3,11:15:8.82:92,9,0	0/0:26,0:25:29.81:0,30,290	0/1:6,0:25:17.30:42,0,17	0/0:15,0:15:38.89:0,39,357
chr10	89412204	.	G	GAT	9631.91	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-17.160;DP=661;FS=6.130;HRun=0;HaplotypeScore=68.6603;InbreedingCoeff=0.9987;MQ=79.34;MQ0=1;MQRankSum=-0.317;QD=43.78;ReadPosRankSum=2.677;VQSLOD=6.5677;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.27:0,93,1251	0/0:15,0:15:45.15:0,45,629	0/0:19,0:19:42.13:0,42,560	0/0:14,0:15:36.09:0,36,482	1/1:2,26:28:75.26:1350,75,0	1/1:1,36:37:87.30:1567,87,0	1/1:1,7:8:18.06:324,18,0	0/0:44,0:44:99:0,120,1613	1/1:1,13:14:30.10:540,30,0	0/0:29,0:29:72.24:0,72,1008	0/0:14,0:14:39.12:0,39,532	1/1:2,29:32:72.25:1296,72,0	0/0:14,0:14:42.13:0,42,571	1/1:0,17:17:48.16:864,48,0	0/0:23,0:23:66.21:0,66,910	0/0:33,0:33:96.31:0,96,1328	0/0:15,0:15:45.15:0,45,630	1/1:1,13:15:39.13:702,39,0	0/0:23,0:23:63.20:0,63,865	0/0:32,0:32:87.28:0,87,1201	1/1:2,24:27:54.18:972,54,0	1/1:0,16:16:48.08:827,48,0	0/0:29,0:29:75.24:0,75,1033	0/0:17,0:17:51.17:0,51,714	1/1:0,26:25:66.23:1189,66,0	0/0:23,0:23:66.22:0,66,925	0/0:36,0:36:99:0,105,1421	0/0:28,0:28:81.27:0,81,1129
chr10	89412768	.	C	CAA	6088.06	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=4.165;DP=374;FS=5.814;HRun=7;HaplotypeScore=54.6609;InbreedingCoeff=0.7799;MQ=63.41;MQ0=6;MQRankSum=-0.339;QD=22.30;ReadPosRankSum=0.734;VQSLOD=2.8350;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:35.65:318,36,0	0/0:2,0:2:2.84:0,3,14	0/1:12,0:4:23.78:34,0,24	0/0:22,0:9:22.25:0,22,228	1/1:6,16:21:38.57:557,39,0	1/1:2,19:21:42.14:689,42,0	1/1:7,13:21:36.12:591,36,0	1/1:11,16:29:42.13:647,42,0	1/1:5,7:12:18.06:295,18,0	0/0:16,0:16:45.13:0,45,516	0/0:15,0:15:36.09:0,36,409	1/1:2,5:7:12.04:197,12,0	0/0:7,0:7:15.02:0,15,164	1/1:4,6:10:9.03:148,9,0	1/1:2,1:7:6.01:58,6,0	0/0:12,0:12:33.08:0,33,374	1/1:3,0:18:23.96:220,24,0	1/1:3,13:15:36.08:561,36,0	1/1:4,13:16:42.14:652,42,0	1/1:1,6:7:18.06:284,18,0	1/1:0,2:2:3.01:49,3,0	1/1:2,3:5:9.03:147,9,0	0/1:14,0:14:0.19:0,0,189	0/0:4,0:4:9.02:0,9,105	1/1:4,7:11:18.06:295,18,0	0/0:16,0:16:36.08:0,36,403	1/1:0,13:14:21.07:345,21,0	0/0:7,0:7:18.05:0,18,210
chr10	89412772	.	A	AAAT	1462.75	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=10.181;DP=345;FS=5.344;HRun=0;HaplotypeScore=70.0678;InbreedingCoeff=0.1344;MQ=67.52;MQ0=5;MQRankSum=-0.530;QD=6.15;ReadPosRankSum=4.733;VQSLOD=1.2476;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:27:48.16:1016,48,0	0/0:1,0:1:3.01:0,3,36	0/1:11,0:5:10.61:11,0,47	0/0:22,0:11:23.80:0,24,296	0/1:20,0:18:6.26:43,0,6	1/1:21,0:21:8.30:77,8,0	0/1:21,0:21:11.19:62,0,11	0/1:22,0:22:16.34:64,0,16	0/1:10,0:10:21.82:22,0,53	0/0:15,0:15:45.15:0,45,697	0/0:13,0:13:36.12:0,36,559	1/1:6,0:6:8.88:29,9,0	0/0:6,0:6:18.05:0,18,261	0/1:9,0:9:9.51:10,0,39	1/1:5,0:5:5.42:23,5,0	0/0:11,0:11:33.11:0,33,522	0/1:16,0:16:12.32:62,0,12	0/1:17,0:16:37.15:48,0,37	1/1:16,0:15:0.78:58,1,0	1/1:6,0:6:9.08:34,9,0	1/1:2,0:2:2.22:7,2,0	0/1:5,0:5:12.67:13,0,16	0/0:12,0:12:20.27:0,20,297	0/0:4,0:4:9.03:0,9,137	0/1:9,0:9:9.22:28,0,9	0/0:15,0:15:39.12:0,39,595	0/1:15,0:15:5.13:33,0,5	0/0:8,0:8:18.06:0,18,274
chr10	89413137	.	GA	G	1469.71	PASS	AB=0.957;AC=27;AF=0.500;AN=54;BaseQRankSum=4.318;DP=407;FS=25.387;HRun=2;HaplotypeScore=82.8149;InbreedingCoeff=0.4745;MQ=61.93;MQ0=23;MQRankSum=-4.876;QD=10.28;ReadPosRankSum=-0.888;VQSLOD=0.0779;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:13:21.39:91,0,21	1/1:5,0:5:2.22:7,2,0	0/0:80,0:25:26.94:0,27,450	0/0:90,1:26:47.15:0,47,532	1/1:3,6:8:17.83:202,18,0	1/1:12,2:13:26.30:192,26,0	1/1:10,2:11:7.41:134,7,0	0/1:24,0:21:99:118,0,250	1/1:0,3:3:6.02:77,6,0	0/0:9,0:9:25.90:0,26,354	0/0:11,0:11:33.11:0,33,480	1/1:2,7:9:20.86:262,21,0	0/0:6,0:6:15.02:0,15,202	1/1:1,2:3:6.02:69,6,0	0/1:5,0:5:9.15:17,0,9	0/0:7,0:7:21.07:0,21,310	0/1:8,3:11:85.90:99,0,86	1/1:1,4:5:6.99:101,7,0	0/1:10,0:11:28.72:29,0,140	./.	0/0:12,0:12:2.49:0,2,16	1/1:1,5:5:5.38:90,5,0	0/0:7,0:7:18.06:0,18,270	0/0:8,0:8:24.08:0,24,360	1/1:2,4:5:4.26:106,4,0	0/0:20,0:19:56:0,56,795	1/1:6,0:6:6.01:65,6,0	0/0:8,0:8:19.88:0,20,275
chr10	89413138	.	A	AG	1897.31	PASS	AB=0.733;AC=28;AF=0.519;AN=54;BaseQRankSum=3.764;DP=416;FS=32.345;HRun=1;HaplotypeScore=85.9242;InbreedingCoeff=0.5146;MQ=63.19;MQ0=22;MQRankSum=-5.235;QD=12.82;ReadPosRankSum=-0.268;VQSLOD=0.7600;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,8:13:21.38:113,0,21	1/1:3,2:6:3.01:31,3,0	0/0:81,0:25:44.47:0,44,454	0/0:90,0:27:37.09:0,37,489	1/1:9,0:8:16.55:169,17,0	1/1:5,10:14:26.38:415,26,0	1/1:3,9:11:7.89:279,8,0	0/1:15,9:22:99:348,0,208	1/1:3,0:3:4.56:42,5,0	0/0:8,0:9:27.04:0,27,350	0/0:11,0:11:33.11:0,33,454	1/1:8,0:9:15.27:107,15,0	0/0:7,0:7:15.02:0,15,190	1/1:3,0:3:4.98:24,5,0	1/1:0,1:6:5.61:47,6,0	0/0:7,0:7:21.07:0,21,290	0/1:7,4:11:79:208,0,79	1/1:5,0:5:3.11:10,3,0	0/1:9,2:11:86.54:87,0,120	./.	0/0:3,0:16:2.26:0,2,16	1/1:6,0:5:4.56:59,5,0	0/0:6,0:6:18.06:0,18,252	0/0:8,0:8:24.08:0,24,336	1/1:6,0:6:9.06:64,9,0	0/0:19,0:19:57.14:0,57,763	1/1:0,6:6:6.02:85,6,0	0/0:7,0:8:21.02:0,21,270
chr10	89415787	.	GGGGGGGGA	G	3197.81	PASS	AB=1.000;AC=10;AF=0.192;AN=52;BaseQRankSum=7.652;DP=204;FS=45.765;HRun=0;HaplotypeScore=58.1387;InbreedingCoeff=0.5203;MQ=65.01;MQ0=2;MQRankSum=-4.068;QD=35.14;ReadPosRankSum=5.765;VQSLOD=0.9224;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:20.18:0,20,128	0/0:1,0:1:0:0,0,0	0/0:11,0:7:15.02:0,15,274	0/0:6,0:5:8.30:0,8,358	0/0:3,0:3:2.71:0,3,43	0/1:5,0:5:13:13,0,122	0/0:10,0:9:9.28:0,9,105	1/1:2,20:22:54.43:751,54,0	0/0:8,0:8:18.05:0,18,466	0/0:5,0:5:5.99:0,6,96	0/0:4,0:4:12.04:0,12,320	0/0:6,0:6:15.05:0,15,398	0/0:6,0:5:8.98:0,9,132	0/1:7,0:7:10.58:11,0,181	./.	0/0:8,0:8:24.07:0,24,819	./.	0/0:9,0:8:27.01:0,27,627	1/1:2,13:15:38.28:636,38,0	1/1:1,16:17:38.93:722,39,0	0/0:1,0:1:3.01:0,3,56	0/0:1,0:1:3.01:0,3,80	0/0:2,0:2:6.02:0,6,163	0/0:3,0:3:9.03:0,9,233	0/0:5,0:5:3.01:0,3,40	0/0:6,0:6:17.82:0,18,297	1/1:1,24:25:50.95:1221,51,0	0/0:2,0:2:6:0,6,73
chr10	89415794	.	GA	G	1891.56	PASS	AC=34;AF=0.630;AN=54;BaseQRankSum=5.346;DP=210;FS=3.168;HRun=1;HaplotypeScore=43.5436;InbreedingCoeff=0.7633;MQ=71.86;MQ0=0;MQRankSum=-3.418;QD=13.05;ReadPosRankSum=2.750;VQSLOD=2.7118;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:16:41.92:345,42,0	./.	0/0:13,0:9:6.28:0,6,187	0/0:7,0:6:11.12:0,11,134	1/1:0,3:4:5.71:32,6,0	1/1:5,0:6:14.02:106,14,0	1/1:2,5:7:2.96:19,3,0	1/1:20,0:20:53.14:360,53,0	1/1:6,0:7:12.17:63,12,0	0/0:6,0:7:11.73:0,12,106	0/0:4,0:4:11.97:0,12,97	1/1:5,0:5:11.37:87,11,0	0/0:4,0:4:8.91:0,9,63	1/1:5,0:5:11.37:85,11,0	1/1:3,0:3:5.90:37,6,0	0/0:9,0:9:26.89:0,27,224	1/1:2,0:2:2.96:19,3,0	1/1:10,0:9:4.64:98,5,0	1/1:13,0:13:38.22:245,38,0	1/1:16,0:17:37.91:217,38,0	1/1:3,0:3:6.88:52,7,0	1/1:2,0:2:5.36:32,5,0	0/0:2,0:2:5.99:0,6,49	0/0:5,0:5:14.71:0,15,108	1/1:1,0:1:3:25,3,0	0/0:9,0:9:26.80:0,27,223	1/1:24,0:24:49.29:266,49,0	0/0:5,0:5:14.96:0,15,120
chr10	89416482	.	G	GA	471.08	PASS	AB=0.933;AC=7;AF=0.135;AN=52;BaseQRankSum=2.125;DP=434;FS=21.558;HRun=10;HaplotypeScore=85.1322;InbreedingCoeff=0.6299;MQ=55.23;MQ0=8;MQRankSum=-2.197;QD=8.26;ReadPosRankSum=-4.080;VQSLOD=-0.3272;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:35.81:0,36,295	1/1:3,5:7:12.03:128,12,0	./.	./.	0/0:22,0:21:32.85:0,33,263	0/0:15,0:16:13.98:0,14,188	0/0:12,0:12:11.76:0,12,98	0/0:26,0:27:35.76:0,36,262	0/0:9,0:9:17.79:0,18,140	0/0:16,0:16:29.89:0,30,241	0/0:17,0:16:14.85:0,15,123	0/0:10,0:10:17.97:0,18,148	0/0:11,0:11:11.91:0,12,98	0/0:14,1:15:6.95:0,7,266	1/1:12,6:16:22.56:177,23,0	0/0:8,0:8:5.78:0,6,46	1/1:9,8:16:31.59:274,32,0	0/1:11,1:14:33.70:34,0,57	0/0:15,0:15:28.99:0,29,228	0/0:23,0:23:1.95:0,2,172	0/0:6,0:6:11.99:0,12,99	0/0:10,0:10:14.74:0,15,123	0/0:12,0:12:29.92:0,30,246	0/0:24,0:24:38.47:0,38,312	0/0:9,0:9:11.92:0,12,98	0/0:19,0:20:22.78:0,23,167	0/0:14,1:14:2.98:0,3,191	0/0:12,0:12:10.70:0,11,141
chr10	89418927	.	T	TCC	2973.15	PASS	AB=0.992;AC=10;AF=0.179;AN=56;BaseQRankSum=1.279;DP=456;FS=2.155;HRun=5;HaplotypeScore=78.8003;InbreedingCoeff=0.6902;MQ=79.72;MQ0=11;MQRankSum=-1.590;QD=18.58;ReadPosRankSum=-3.825;VQSLOD=-0.1009;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:33.11:0,33,460	0/0:8,0:8:17.30:0,17,146	0/0:63,0:34:13.98:0,14,568	0/1:61,0:24:13.75:14,0,141	0/0:13,0:13:13.17:0,13,99	0/0:10,0:10:25.37:0,25,126	0/0:7,0:7:14.83:0,15,68	1/1:7,20:28:66.63:955,67,0	0/0:12,0:12:13.02:0,13,165	0/0:10,0:10:27.09:0,27,374	0/0:18,0:18:54.18:0,54,746	0/0:9,0:9:14.22:0,14,59	0/0:8,0:8:24.08:0,24,335	0/0:6,0:5:0.23:0,0,10	0/0:7,0:7:17.47:0,17,125	0/0:12,0:12:36.12:0,36,500	0/0:16,0:16:34.73:0,35,319	0/0:18,0:18:20.83:0,21,92	1/1:3,15:19:45.54:668,46,0	1/1:2,14:17:39.13:633,39,0	0/0:8,0:8:12.44:0,12,99	0/1:6,0:6:6.87:7,0,17	0/0:12,0:12:33.10:0,33,441	0/0:3,0:3:9.03:0,9,126	0/0:11,0:11:13.45:0,13,110	0/0:20,0:19:57.18:0,57,780	1/1:6,21:28:51.17:862,51,0	0/0:10,0:10:19.57:0,20,289
chr10	89418930	.	C	CAA	3831.67	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-2.273;DP=460;FS=4.131;HRun=10;HaplotypeScore=75.6258;InbreedingCoeff=0.7846;MQ=78.70;MQ0=11;MQRankSum=-3.316;QD=13.83;ReadPosRankSum=1.771;VQSLOD=1.9358;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:35.90:0,36,350	1/1:2,1:7:15.03:159,15,0	0/0:71,0:35:55.28:0,55,478	0/1:68,0:25:4.43:4,0,118	1/1:0,12:13:38.97:475,39,0	1/1:1,8:10:19.72:351,20,0	1/1:0,6:7:18.05:252,18,0	0/1:20,0:20:15.97:16,0,62	1/1:3,8:12:23.57:322,24,0	0/0:10,0:10:30.05:0,30,296	0/0:17,0:18:51.02:0,51,504	1/1:0,9:11:24.07:340,24,0	0/0:8,0:8:21.05:0,21,214	1/1:0,5:4:9.03:134,9,0	1/1:1,1:8:15.02:143,15,0	0/0:14,0:14:33:0,33,325	1/1:6,1:18:24.04:244,24,0	1/1:0,16:20:35.09:448,35,0	0/1:15,0:15:6.52:7,0,58	1/1:15,0:15:18.07:87,18,0	1/1:1,6:8:17.55:232,18,0	1/1:0,5:7:18.02:243,18,0	0/0:12,0:12:35.82:0,36,347	0/0:3,0:3:8.99:0,9,82	1/1:1,9:12:17.55:233,18,0	0/0:21,0:20:51.07:0,51,509	1/1:21,0:21:28.77:142,29,0	0/0:10,0:12:18.18:0,18,219
chr10	89419116	.	CATTCATATTT	C	3920.28	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.200;DP=384;FS=29.339;HRun=0;HaplotypeScore=126.9290;InbreedingCoeff=0.9027;MQ=73.41;MQ0=0;MQRankSum=-3.677;QD=56.00;ReadPosRankSum=-2.685;VQSLOD=1.2674;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:42.14:0,42,1950	0/0:9,0:9:27.09:0,27,1337	0/0:11,0:10:19.86:0,20,506	0/0:7,0:7:3.72:0,4,279	0/0:22,0:22:66.21:0,66,2949	0/0:12,0:12:36.12:0,36,1749	0/0:9,0:9:21.07:0,21,868	1/1:9,20:29:60.16:1373,60,0	0/0:9,0:9:21.07:0,21,1064	0/0:13,0:13:33.11:0,33,1435	0/0:15,0:15:39.12:0,39,1604	0/0:19,0:19:48.15:0,48,1945	0/0:8,0:8:21.07:0,21,1061	0/0:8,0:8:21.07:0,21,1074	0/0:11,0:11:27.09:0,27,1220	0/0:12,0:12:36.11:0,36,1540	0/0:18,0:18:36.11:0,36,1684	0/0:19,0:19:51.18:0,51,2181	1/1:3,14:17:42.14:1094,42,0	1/1:1,12:13:33.11:987,33,0	0/0:15,0:15:42.13:0,42,1931	0/0:2,0:2:3.01:0,3,120	0/0:11,0:11:27.09:0,27,1296	0/0:13,0:13:36.12:0,36,1758	0/0:15,0:15:36.12:0,36,1653	0/0:20,0:20:48.16:0,48,2273	1/1:1,10:11:15.05:467,15,0	0/0:19,0:19:45.08:0,45,1514
chr10	89419924	.	T	TAA	23709.93	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-11.366;DP=741;FS=10.697;HRun=1;HaplotypeScore=82.7891;InbreedingCoeff=1.0000;MQ=88.19;MQ0=1;MQRankSum=-4.363;QD=51.32;ReadPosRankSum=1.247;VQSLOD=3.6233;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,1903	1/1:2,12:14:36.12:696,36,0	0/0:21,0:21:59.65:0,60,795	0/0:31,0:31:83.17:0,83,1150	1/1:0,25:25:75.18:1371,75,0	1/1:0,26:26:72.25:1391,72,0	1/1:0,23:23:63.22:1217,63,0	1/1:1,34:36:99:1919,105,0	1/1:3,27:31:38.31:1482,38,0	0/0:25,0:25:66.22:0,66,1011	0/0:22,0:22:66.22:0,66,1011	1/1:1,32:34:84.29:1620,84,0	0/0:26,0:26:75.22:0,75,1122	1/1:2,27:30:87.26:1617,87,0	1/1:1,35:36:99:1967,102,0	0/0:33,0:33:99:0,99,1473	1/1:0,18:18:48.16:927,48,0	1/1:1,22:23:60.21:1160,60,0	1/1:3,15:18:48.16:925,48,0	1/1:2,26:28:78.23:1416,78,0	1/1:0,28:28:78.27:1507,78,0	1/1:1,27:28:78.22:1449,78,0	0/0:18,0:18:54.18:0,54,827	0/0:14,0:14:42.14:0,42,642	1/1:1,20:21:54.19:1040,54,0	0/0:32,0:32:96.33:0,96,1469	1/1:2,38:42:99:2008,105,0	0/0:15,0:15:45.15:0,45,689
chr10	89420657	.	A	ACT	22424.82	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-15.290;DP=689;FS=0.302;HRun=0;HaplotypeScore=72.3127;InbreedingCoeff=0.9991;MQ=71.62;MQ0=0;MQRankSum=-3.281;QD=48.64;ReadPosRankSum=1.911;VQSLOD=5.7613;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,41:47:99:1854,99,0	1/1:0,9:9:24.08:449,24,0	0/0:19,0:19:54.18:0,54,763	0/0:19,0:18:48.15:0,48,652	1/1:3,21:24:63.22:1172,63,0	1/1:2,28:30:81.28:1517,81,0	1/1:1,26:29:75.26:1405,75,0	1/1:3,27:30:87.27:1563,87,0	1/1:0,22:22:63.22:1180,63,0	0/0:28,0:28:75.25:0,75,1105	0/0:20,0:20:57.19:0,57,836	1/1:1,21:22:63.22:1180,63,0	0/0:26,0:26:75.25:0,75,1104	1/1:0,25:26:72.25:1349,72,0	1/1:2,17:19:51.17:955,51,0	0/0:30,0:30:87.27:0,87,1244	1/1:2,20:22:60.21:1123,60,0	1/1:2,16:18:36.12:674,36,0	1/1:2,17:19:48.15:868,48,0	1/1:0,22:23:60.21:1124,60,0	1/1:2,33:35:87.30:1630,87,0	1/1:1,26:28:69.24:1292,69,0	0/0:19,0:19:57.19:0,57,839	0/0:35,0:35:99:0,102,1479	1/1:1,27:28:78.27:1461,78,0	0/0:24,0:24:69.23:0,69,1009	1/1:1,29:29:87.30:1629,87,0	0/0:8,0:8:21.07:0,21,309
chr10	89421312	.	G	GA	2297.04	PASS	AB=0.817;AC=18;AF=0.321;AN=56;BaseQRankSum=-8.130;DP=557;FS=7.101;HRun=12;HaplotypeScore=65.7955;InbreedingCoeff=0.5260;MQ=72.00;MQ0=0;MQRankSum=-0.350;QD=9.69;ReadPosRankSum=-2.935;VQSLOD=1.9588;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:7,21:29:44.83:411,45,0	1/1:2,2:4:6.01:58,6,0	0/0:20,0:15:22.70:0,23,147	0/0:17,0:13:1.34:0,1,93	0/0:16,2:18:6.58:0,7,212	0/0:17,1:18:20.95:0,21,307	0/1:12,2:14:25.56:26,0,164	1/1:11,18:29:52.06:455,52,0	0/0:17,0:17:38.71:0,39,281	0/1:22,2:24:16.22:16,0,183	0/0:20,0:20:47.71:0,48,350	0/0:21,0:22:16.51:0,17,244	0/0:15,0:17:15.08:0,15,227	0/0:15,1:16:0.58:0,1,167	1/1:8,12:20:5.16:212,5,0	0/0:18,0:19:43.73:0,44,312	1/1:5,20:26:58.54:529,59,0	0/0:27,0:27:52.77:0,53,520	1/1:15,13:29:11.33:418,11,0	1/1:4,9:13:26.92:235,27,0	0/0:10,0:11:28.88:0,29,202	0/0:11,0:12:22.88:0,23,159	0/0:17,0:19:37.73:0,38,268	0/1:18,4:22:25.60:26,0,164	0/0:14,0:14:23.81:0,24,175	0/0:28,2:30:14.58:0,15,387	0/1:10,15:25:25.70:99,0,26	0/0:21,0:20:3.95:0,4,282
chr10	89421630	.	GAT	G	3735.28	PASS	AB=1.000;AC=37;AF=0.685;AN=54;BaseQRankSum=5.619;DP=247;FS=21.956;HRun=0;HaplotypeScore=37.2075;InbreedingCoeff=0.6382;MQ=91.91;MQ0=0;MQRankSum=1.856;QD=23.35;ReadPosRankSum=0.968;VQSLOD=1.9393;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:18.06:229,18,0	1/1:1,0:1:3:27,3,0	0/0:11,0:7:0.44:0,0,24	0/0:30,0:21:12.41:0,12,140	1/1:2,8:10:24.08:305,24,0	1/1:2,13:15:35.48:428,35,0	1/1:1,6:7:6.02:76,6,0	1/1:5,21:26:60.17:734,60,0	1/1:2,5:7:9.03:114,9,0	0/0:5,0:5:12.04:0,12,196	0/0:8,0:8:21.06:0,21,319	1/1:0,3:3:9.03:115,9,0	0/1:6,0:6:8.80:9,0,147	1/1:2,2:4:3.01:38,3,0	1/1:1,2:3:6.02:76,6,0	./.	1/1:2,19:20:48.15:610,48,0	1/1:2,4:6:12.01:136,12,0	1/1:1,12:13:33.07:376,33,0	1/1:1,7:8:11.97:118,12,0	1/1:0,2:2:6.02:76,6,0	1/1:0,1:1:3.01:38,3,0	0/0:2,0:2:3.01:0,3,47	0/0:1,0:1:3.01:0,3,46	1/1:0,8:8:9.03:115,9,0	0/0:6,0:6:18.06:0,18,286	1/1:1,4:5:9.03:114,9,0	0/0:21,0:21:63.21:0,63,1025
chr10	89422670	.	T	TGGGTG	14667.07	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-12.663;DP=691;FS=10.251;HRun=0;HaplotypeScore=130.6657;InbreedingCoeff=0.9995;MQ=74.48;MQ0=0;MQRankSum=-6.314;QD=55.14;ReadPosRankSum=2.874;VQSLOD=4.8569;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,108,2146	0/0:12,0:12:33.11:0,33,632	0/0:16,0:16:40.35:0,40,696	0/0:17,0:17:27.64:0,28,639	1/1:6,18:25:36.12:1002,36,0	1/1:11,20:31:60.21:1708,60,0	1/1:6,18:25:30.57:838,31,0	0/0:21,0:21:51.17:0,51,1018	1/1:1,13:17:36.12:1098,36,0	0/0:21,0:21:51.13:0,51,976	0/0:22,0:22:57.19:0,57,1085	1/1:7,20:29:69.24:2041,69,0	0/0:27,0:27:72.24:0,72,1448	1/1:6,25:32:75.73:2258,76,0	0/0:25,0:25:66.23:0,66,1353	0/0:19,0:19:51.17:0,51,1046	0/0:47,0:47:99:0,138,2718	1/1:4,28:33:78.27:2328,78,0	0/0:10,0:10:27.08:0,27,484	0/0:20,0:20:48.15:0,48,922	1/1:13,24:38:45.11:1263,45,0	1/1:4,12:17:33.11:954,33,0	0/0:18,0:18:45.15:0,45,897	0/0:27,0:27:78.27:0,78,1559	1/1:3,16:19:39.13:1178,39,0	0/0:31,0:31:90.28:0,90,1723	0/0:32,0:32:87.30:0,87,1758	0/0:16,0:16:42.14:0,42,862
chr10	89423517	.	G	GGTAT	21075.07	PASS	AB=0.917;AC=29;AF=0.518;AN=56;BaseQRankSum=-15.270;DP=655;FS=1.752;HRun=0;HaplotypeScore=106.4145;InbreedingCoeff=0.9280;MQ=79.37;MQ0=1;MQRankSum=-3.236;QD=55.61;ReadPosRankSum=2.266;VQSLOD=6.2180;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.33:0,96,1778	0/0:15,0:15:39.11:0,39,651	0/0:19,0:19:54.19:0,54,993	0/0:17,0:17:44.70:0,45,745	1/1:2,13:17:24.08:639,24,0	1/1:2,25:28:63.22:1626,63,0	1/1:5,22:27:57.20:1438,57,0	1/1:16,27:46:99:3131,123,0	1/1:4,27:31:69.24:1761,69,0	0/0:22,0:22:60.19:0,60,1054	0/0:12,0:12:33.11:0,33,615	1/1:1,28:30:75.26:1972,75,0	0/0:22,0:22:63.17:0,63,1140	1/1:2,22:24:54.19:1412,54,0	0/0:27,0:27:72.23:0,72,1302	0/0:21,0:21:63.22:0,63,1176	0/1:20,2:22:96.84:97,0,1000	1/1:2,19:21:57.20:1479,57,0	1/1:8,9:19:54.18:1296,54,0	1/1:4,14:20:30.10:791,30,0	1/1:6,24:30:72.19:1776,72,0	1/1:1,15:16:36.12:942,36,0	0/0:16,0:16:39.13:0,39,716	0/0:23,0:23:63.22:0,63,1176	1/1:1,16:16:33.11:880,33,0	0/0:28,0:28:75.23:0,75,1339	1/1:5,26:30:69.24:1835,69,0	0/0:18,0:18:54.13:0,54,911
chr10	89425763	.	C	CCA	16135.11	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-16.613;DP=750;FS=0.282;HRun=0;HaplotypeScore=82.8065;InbreedingCoeff=0.9999;MQ=93.89;MQ0=2;MQRankSum=-3.783;QD=44.82;ReadPosRankSum=0.307;VQSLOD=6.0501;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,2104	0/0:15,0:15:42.14:0,42,615	0/0:33,0:33:90.28:0,90,1283	0/0:40,0:40:99:0,108,1548	1/1:1,25:26:71.77:1318,72,0	1/1:1,16:17:36.12:674,36,0	1/1:2,18:21:36.12:674,36,0	1/1:3,30:33:96.32:1726,96,0	1/1:1,38:39:99:1911,102,0	0/0:18,0:18:51.15:0,51,696	0/0:11,0:11:30.10:0,30,442	1/1:0,21:23:63.22:1180,63,0	0/0:19,0:19:54.18:0,54,794	1/1:0,27:27:60.21:1123,60,0	0/0:28,0:28:75.24:0,75,1085	0/0:30,0:30:87.29:0,87,1264	0/0:30,0:30:87.28:0,87,1260	1/1:0,31:32:69.24:1293,69,0	1/1:4,17:20:57.19:1016,57,0	1/1:2,15:17:42.14:786,42,0	1/1:0,33:33:87.30:1630,87,0	1/1:0,20:21:48.16:899,48,0	0/0:19,0:19:51.16:0,51,733	0/0:48,0:48:99:0,144,2062	1/1:3,17:20:39.13:726,39,0	0/0:37,0:37:99:0,102,1502	1/1:1,28:27:63.22:1179,63,0	0/0:12,0:12:36.12:0,36,530
chr10	89428557	.	GGAA	G	8020.36	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.176;DP=717;FS=3.822;HRun=0;HaplotypeScore=106.2723;InbreedingCoeff=0.9903;MQ=67.20;MQ0=1;MQRankSum=-2.675;QD=34.87;ReadPosRankSum=4.037;VQSLOD=5.5392;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,2288	0/0:10,0:10:30.10:0,30,670	0/0:32,0:23:48.70:0,49,928	0/0:29,0:21:8.57:0,9,764	1/1:1,19:20:48.16:777,48,0	1/1:1,18:19:33.11:538,33,0	1/1:2,24:26:57.19:930,57,0	0/0:32,0:32:81.28:0,81,1763	1/1:1,21:22:60.20:979,60,0	0/0:20,0:20:57.20:0,57,1258	0/0:28,0:28:81.28:0,81,1766	1/1:0,28:28:57.19:928,57,0	0/0:37,0:37:99:0,105,2289	1/1:2,33:35:84.29:1370,84,0	0/0:35,0:35:99:0,102,2231	0/0:38,0:38:99:0,114,2451	0/0:38,0:38:99:0,105,2266	1/1:2,20:22:39.13:637,39,0	0/0:23,0:23:51.17:0,51,1107	0/0:20,0:20:60.21:0,60,1340	1/1:0,17:17:42.08:655,42,0	1/1:3,20:23:44.98:668,45,0	0/0:19,0:19:48.16:0,48,1071	0/0:17,0:17:45.15:0,45,989	1/1:1,17:18:33.11:539,33,0	0/0:28,0:28:81.28:0,81,1810	0/0:30,0:30:90.30:0,90,1902	0/0:12,0:12:33.11:0,33,737
chr10	89429642	.	TTTG	T	8982.97	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=9.889;DP=596;FS=17.497;HRun=0;HaplotypeScore=105.6326;InbreedingCoeff=0.9899;MQ=57.61;MQ0=4;MQRankSum=-13.549;QD=33.27;ReadPosRankSum=-0.759;VQSLOD=4.1116;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.24:0,78,1441	0/0:11,0:11:27.09:0,27,514	0/0:34,0:21:18.73:0,19,358	0/0:26,0:19:22.03:0,22,390	1/1:13,12:24:57.18:809,57,0	1/1:9,10:19:45.14:650,45,0	1/1:13,10:23:51.16:725,51,0	1/1:11,4:15:24.04:331,24,0	1/1:3,16:19:51.17:754,51,0	0/0:26,0:26:69.23:0,69,1296	0/0:26,0:26:57.17:0,57,1075	1/1:6,12:18:51.17:766,51,0	0/0:12,0:12:30.09:0,30,564	1/1:6,10:16:39.13:571,39,0	0/0:25,0:25:69.22:0,69,1278	0/0:22,0:22:66.21:0,66,1261	0/0:27,0:27:66.20:0,66,1250	1/1:6,14:20:51.17:751,51,0	1/1:19,5:22:42.12:556,42,0	1/1:12,7:19:54.18:798,54,0	1/1:5,1:6:9.03:135,9,0	1/1:11,5:15:30.10:439,30,0	0/0:15,0:15:39.13:0,39,775	0/0:23,0:23:60.20:0,60,1088	1/1:10,11:21:42.14:620,42,0	0/0:34,0:34:87.29:0,87,1636	1/1:12,17:29:75.23:1077,75,0	0/0:14,0:14:27.09:0,27,568
chr10	89429659	.	CTTT	C	2803.61	PASS	AB=0.630;AC=20;AF=0.357;AN=56;BaseQRankSum=10.215;DP=570;FS=21.961;HRun=14;HaplotypeScore=127.1263;InbreedingCoeff=0.7900;MQ=51.03;MQ0=7;MQRankSum=-9.510;QD=14.02;ReadPosRankSum=3.136;VQSLOD=0.6646;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:29:22.91:0,23,845	0/0:11,0:12:21.05:0,21,339	0/0:22,0:11:11.34:0,11,144	0/0:17,0:10:17.41:0,17,214	1/1:9,11:21:12.38:181,12,0	1/1:10,8:17:19.49:241,19,0	1/1:2,18:21:32.53:364,33,0	0/1:7,2:13:24.36:53,0,24	1/1:5,18:22:44.98:520,45,0	0/0:20,0:23:50.59:0,51,772	0/0:22,0:24:57.12:0,57,916	1/1:6,13:17:45.09:513,45,0	0/0:12,0:15:36.04:0,36,532	1/1:9,8:18:28.68:332,29,0	0/0:20,0:25:63.12:0,63,1000	0/0:21,0:24:63.15:0,63,1084	0/0:27,0:31:71.68:0,72,1204	1/1:9,11:21:35.66:391,36,0	0/1:5,1:13:21.89:22,0,30	0/0:6,0:18:5.85:0,6,14	0/0:5,0:6:2.68:0,3,11	1/1:4,7:11:16.87:206,17,0	0/0:17,0:18:35.05:0,35,482	0/0:27,0:28:68.67:0,69,1167	1/1:7,8:16:17.62:191,18,0	0/0:35,0:35:87.27:0,87,1501	0/0:18,0:27:19.57:0,20,87	0/0:14,0:14:30.10:0,30,516
chr10	89429743	.	A	AG	9575.76	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=17.119;DP=577;FS=2.277;HRun=0;HaplotypeScore=77.4599;InbreedingCoeff=0.9973;MQ=57.92;MQ0=1;MQRankSum=2.039;QD=33.25;ReadPosRankSum=0.274;VQSLOD=4.3477;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,1922	0/0:9,0:9:27.09:0,27,378	0/0:9,0:8:21.07:0,21,288	0/0:7,0:7:15.93:0,16,199	1/1:0,21:21:57.19:776,57,0	1/1:2,19:21:54.15:713,54,0	1/1:8,15:22:39.13:526,39,0	1/1:8,14:22:44.08:596,44,0	1/1:3,11:13:32.58:438,33,0	0/0:20,0:20:57.19:0,57,793	0/0:17,0:17:51.16:0,51,693	1/1:2,20:21:57.17:777,57,0	0/0:16,0:16:48.15:0,48,653	1/1:1,16:17:45.11:588,45,0	0/0:21,0:21:60.20:0,60,839	0/0:21,0:21:60.18:0,60,813	0/0:40,0:40:99:0,111,1547	1/1:1,21:22:60.15:785,60,0	1/1:6,17:22:57.59:745,58,0	1/1:2,18:20:47.22:643,47,0	1/1:0,19:19:45.15:609,45,0	1/1:0,23:23:60.20:824,60,0	0/0:19,0:19:54.15:0,54,719	0/0:32,0:32:96.32:0,96,1338	1/1:0,16:16:48.16:645,48,0	0/0:20,0:20:60.20:0,60,838	1/1:1,24:25:66.22:911,66,0	0/0:9,0:9:27.09:0,27,370
chr10	89430071	.	TG	T	12295.85	PASS	AB=0.805;AC=54;AF=0.964;AN=56;BaseQRankSum=-2.288;DP=597;FS=1.163;HRun=9;HaplotypeScore=89.1583;InbreedingCoeff=-0.0401;MQ=81.83;MQ0=0;MQRankSum=-4.384;QD=20.60;ReadPosRankSum=3.576;VQSLOD=5.3392;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,23:30:63.03:576,63,0	1/1:1,11:12:29.98:266,30,0	0/1:15,9:21:91.28:184,0,91	0/1:13,2:15:62.53:63,0,76	1/1:5,13:18:38.99:357,39,0	1/1:1,22:23:66.04:604,66,0	1/1:5,24:29:62.99:572,63,0	1/1:4,13:17:38.94:348,39,0	1/1:5,10:15:29.96:270,30,0	1/1:7,15:22:51.02:465,51,0	1/1:2,10:12:27.01:246,27,0	1/1:0,24:24:69.04:631,69,0	1/1:1,15:16:48.03:439,48,0	1/1:3,24:27:66.03:604,66,0	1/1:2,19:21:57.02:521,57,0	1/1:3,15:18:50.06:444,50,0	1/1:5,25:30:68.99:623,69,0	1/1:5,16:21:51:461,51,0	1/1:7,11:17:32.94:292,33,0	1/1:8,11:19:35.96:329,36,0	1/1:2,37:39:99:933,102,0	1/1:5,20:25:54.01:494,54,0	1/1:5,13:19:38.06:335,38,0	1/1:2,16:18:48.02:439,48,0	1/1:9,17:26:53.95:493,54,0	1/1:8,20:28:65.03:575,65,0	1/1:3,14:17:45.01:410,45,0	1/1:1,13:14:7.41:322,7,0
chr10	89430902	.	CATTCTCAT	C	3560.77	PASS	AB=1.000;AC=25;AF=0.481;AN=52;BaseQRankSum=6.295;DP=405;FS=13.166;HRun=0;HaplotypeScore=91.5623;InbreedingCoeff=0.7614;MQ=69.86;MQ0=4;MQRankSum=-10.374;QD=19.35;ReadPosRankSum=-0.660;VQSLOD=1.7210;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.20:0,72,1884	0/0:5,0:5:8.45:0,8,61	0/0:13,0:11:26.41:0,26,588	0/0:22,0:18:35.75:0,36,914	./.	1/1:14,1:15:6.02:113,6,0	1/1:14,0:14:18.95:349,19,0	1/1:34,0:31:63.22:1302,63,0	1/1:2,10:12:3.01:82,3,0	0/0:15,0:15:39.13:0,39,1118	0/0:13,0:13:36.12:0,36,1051	1/1:2,9:11:8.09:155,8,0	0/0:13,0:13:33.11:0,33,1007	1/1:0,10:10:6.02:74,6,0	0/1:21,0:21:10.48:47,0,10	0/0:17,0:17:39.13:0,39,1329	0/0:19,0:18:2.96:0,3,19	1/1:10,0:10:21.07:435,21,0	1/1:13,0:13:26.87:517,27,0	1/1:8,0:8:9.03:136,9,0	./.	1/1:0,9:9:3.01:37,3,0	0/0:9,0:9:27.09:0,27,731	0/0:24,0:24:48.16:0,48,1330	1/1:0,8:8:3.01:37,3,0	0/0:18,0:18:48.15:0,48,1123	1/1:19,0:19:15.03:277,15,0	0/0:12,0:12:36.08:0,36,888
chr10	89430904	.	TTCTCATATTCTC	T	3085.19	PASS	AB=1.000;AC=16;AF=0.308;AN=52;BaseQRankSum=4.504;DP=398;FS=8.167;HRun=0;HaplotypeScore=112.2209;InbreedingCoeff=0.5903;MQ=68.43;MQ0=5;MQRankSum=-10.106;QD=20.99;ReadPosRankSum=-0.320;VQSLOD=1.8867;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.20:0,72,1885	0/0:5,0:5:8.69:0,9,64	0/0:13,0:11:26.64:0,27,589	0/0:20,0:16:35.75:0,36,915	./.	0/1:16,0:16:15.47:21,0,15	0/1:14,0:14:8.93:324,0,9	1/1:34,0:30:63.22:1302,63,0	1/1:12,0:12:3:28,3,0	0/0:16,0:16:45.15:0,45,1377	0/0:13,0:13:36.12:0,36,1210	0/1:11,0:11:3.02:3,0,56	0/0:12,0:12:33.11:0,33,1255	0/1:10,0:10:1.40:1,0,13	0/0:19,0:19:12.03:0,12,175	0/0:16,0:16:39.13:0,39,1713	0/0:18,0:17:9.03:0,9,136	1/1:10,0:10:21.07:435,21,0	1/1:13,0:13:27.04:518,27,0	1/1:8,0:8:9.03:136,9,0	./.	0/0:9,0:9:2.94:0,3,18	0/0:9,0:9:27.09:0,27,836	0/0:22,0:22:48.16:0,48,1439	0/0:8,0:8:3.01:0,3,33	0/0:18,0:18:48.16:0,48,1250	1/1:1,18:19:15.05:488,15,0	0/0:12,0:12:36.08:0,36,1032
chr10	89430906	.	CTCATAT	C	3230.05	PASS	AC=28;AF=0.538;AN=52;BaseQRankSum=6.589;DP=394;FS=14.652;HRun=0;HaplotypeScore=78.2153;InbreedingCoeff=0.8226;MQ=67.41;MQ0=6;MQRankSum=-10.536;QD=16.31;ReadPosRankSum=-0.696;VQSLOD=1.0853;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.20:0,72,1884	0/0:5,0:5:8.35:0,8,60	0/0:12,0:10:26.64:0,27,589	0/0:20,0:16:35.28:0,35,914	./.	1/1:1,15:16:6.02:131,6,0	1/1:14,0:14:20.13:368,20,0	1/1:33,0:29:63.22:1302,63,0	1/1:12,0:12:3.01:62,3,0	0/0:16,0:16:45.15:0,45,1258	0/0:13,0:13:36.12:0,36,1009	1/1:10,0:10:7.32:64,7,0	0/0:12,0:12:33.11:0,33,937	1/1:10,0:10:5.85:34,6,0	1/1:19,0:19:9:127,9,0	0/0:16,0:16:39.13:0,39,1205	1/1:18,0:17:0.88:2,1,0	1/1:10,0:10:21.07:435,21,0	1/1:12,0:12:27.05:518,27,0	1/1:8,0:8:9.03:136,9,0	./.	1/1:9,0:9:2.92:17,3,0	0/0:10,0:9:27.09:0,27,748	0/0:21,0:21:48.16:0,48,1316	1/1:8,0:8:1.82:5,2,0	0/0:18,0:18:48.05:0,48,1097	1/1:19,0:19:14.64:223,15,0	0/0:12,0:12:36.08:0,36,900
chr10	89430908	.	CATAT	C	3127.21	PASS	AB=1.000;AC=23;AF=0.426;AN=54;BaseQRankSum=5.943;DP=369;FS=11.775;HRun=0;HaplotypeScore=64.9742;InbreedingCoeff=0.7588;MQ=66.46;MQ0=8;MQRankSum=-10.487;QD=19.30;ReadPosRankSum=-0.775;VQSLOD=2.0691;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:72.20:0,72,1884	0/0:0,0:5:8.22:0,8,59	0/0:11,0:9:26.53:0,27,588	0/0:19,0:15:35.28:0,35,914	./.	1/1:16,0:16:6.02:93,6,0	1/1:0,11:11:21.07:406,21,0	1/1:1,25:23:63.22:1302,63,0	1/1:10,0:10:3.01:44,3,0	0/0:16,0:16:45.15:0,45,1256	0/0:12,0:12:36.12:0,36,1006	0/1:9,0:9:2.06:33,0,2	0/0:11,0:11:33.11:0,33,867	1/1:10,0:10:2.68:16,3,0	1/1:19,1:20:10.92:130,11,0	0/0:16,0:16:39.13:0,39,1098	1/1:16,0:15:3:27,3,0	1/1:0,7:7:21.07:435,21,0	1/1:0,10:10:27.05:518,27,0	1/1:0,8:8:9.03:136,9,0	0/0:0,6:6:0:0,0,0	0/0:9,0:9:0.89:0,1,2	0/0:10,0:9:27.09:0,27,735	0/0:20,0:20:48.16:0,48,1289	0/0:8,0:8:2.50:0,2,9	0/0:17,0:17:48.16:0,48,1149	1/1:18,1:19:11.60:177,12,0	0/0:13,0:12:36.08:0,36,901
chr10	89430910	.	TATTC	T	1307.78	PASS	AB=1.000;AC=23;AF=0.442;AN=52;BaseQRankSum=8.881;DP=372;FS=7.896;HRun=0;HaplotypeScore=71.4499;InbreedingCoeff=0.7282;MQ=62.07;MQ0=8;MQRankSum=-9.771;QD=8.02;ReadPosRankSum=-1.196;VQSLOD=1.1216;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:69.22:0,69,989	1/1:6,0:6:5.92:42,6,0	0/0:10,0:8:21.05:0,21,305	0/0:17,0:13:35.44:0,35,523	./.	1/1:18,0:18:5.96:45,6,0	1/1:11,0:11:19.24:158,19,0	1/1:28,0:24:62.49:447,62,0	1/1:10,0:10:2.99:24,3,0	0/0:15,0:15:45.15:0,45,799	0/0:12,0:12:36.12:0,36,592	0/1:11,0:10:29.96:60,0,30	0/0:12,0:12:34.64:0,35,637	0/0:10,0:10:2.20:0,2,13	1/1:3,17:20:11.35:189,11,0	0/0:17,0:17:39.10:0,39,814	1/1:1,14:14:3.01:63,3,0	1/1:7,0:7:20.90:157,21,0	1/1:10,0:10:23.85:174,24,0	1/1:8,0:8:5.49:31,5,0	./.	0/0:10,0:10:2.98:0,3,21	0/0:11,0:10:26.12:0,26,390	0/0:19,0:19:43.03:0,43,683	0/0:8,0:8:2.98:0,3,21	0/0:13,0:13:38.05:0,38,521	1/1:19,0:19:12.89:110,13,0	0/0:14,0:13:31.81:0,32,435
chr10	89430912	.	TTCTC	T	347.97	PASS	AB=0.945;AC=18;AF=0.391;AN=46;BaseQRankSum=3.297;DP=399;FS=11.013;HRun=0;HaplotypeScore=79.9201;InbreedingCoeff=0.1207;MQ=59.22;MQ0=8;MQRankSum=-1.110;QD=1.64;ReadPosRankSum=2.800;VQSLOD=0.2508;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:0:0,0,0	0/1:6,0:6:0:0,0,0	./.	0/0:17,0:13:0:0,0,0	./.	0/1:19,0:19:10.34:10,0,65	0/0:14,0:14:2.74:0,3,12	./.	1/1:10,0:10:2.96:19,3,0	0/0:18,0:18:7.84:0,8,109	0/0:12,0:12:5.98:0,6,70	0/1:13,0:12:9.10:9,0,44	0/1:12,1:13:28.15:28,0,291	0/0:14,0:14:12.01:0,12,178	1/1:21,0:21:8.10:56,8,0	0/0:12,0:16:20.81:0,21,423	0/1:17,0:16:15.71:16,0,58	0/0:10,0:9:6.02:0,6,119	./.	./.	0/1:8,0:8:0:0,0,0	0/0:14,0:14:6.01:0,6,86	1/1:11,0:10:3.01:44,3,0	0/1:15,4:19:37.45:37,0,47	0/0:8,0:8:3:0,3,26	0/1:10,1:12:3.44:65,0,3	1/1:20,0:20:14.62:132,15,0	0/1:12,1:13:6.34:61,0,6
chr10	89432293	.	TTAGAGA	T	15446.98	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=14.974;DP=624;FS=7.580;HRun=0;HaplotypeScore=129.1795;InbreedingCoeff=0.9962;MQ=68.41;MQ0=2;MQRankSum=-14.525;QD=47.68;ReadPosRankSum=4.047;VQSLOD=4.3076;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.10:0,48,1495	0/0:9,0:9:27.07:0,27,787	0/0:33,0:26:63.93:0,64,1809	0/0:26,0:18:38.98:0,39,737	1/1:0,27:27:63.21:1497,63,0	1/1:0,21:21:48.16:1216,48,0	1/1:0,17:17:36.12:912,36,0	1/1:0,31:30:90.11:1670,90,0	1/1:0,24:24:45.15:1116,45,0	0/0:29,0:29:83.79:0,84,2220	0/0:21,0:21:54.11:0,54,1629	1/1:0,34:34:66.23:1645,66,0	0/0:18,0:18:54.14:0,54,1552	1/1:0,23:23:39.13:971,39,0	0/0:28,0:28:78.23:0,78,2641	0/0:18,0:18:54.18:0,54,1918	0/0:22,0:21:66.12:0,66,1888	1/1:0,17:17:18.06:457,18,0	1/1:1,27:28:78.22:1648,78,0	1/1:0,20:20:27.09:563,27,0	1/1:0,17:17:20.19:564,20,0	1/1:0,13:14:21.07:478,21,0	0/0:21,0:21:63.19:0,63,2012	0/0:20,0:20:57.12:0,57,1414	1/1:0,20:19:39.13:987,39,0	0/0:32,0:32:96.31:0,96,3150	1/1:0,31:30:69.24:1724,69,0	0/0:6,0:6:18.06:0,18,631
chr10	89433405	.	GAA	G	2010.66	PASS	AB=0.655;AC=19;AF=0.339;AN=56;BaseQRankSum=4.549;DP=362;FS=1.637;HRun=13;HaplotypeScore=56.6401;InbreedingCoeff=0.3678;MQ=66.38;MQ0=4;MQRankSum=1.027;QD=13.96;ReadPosRankSum=5.347;VQSLOD=2.1183;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:26:65.62:0,66,814	0/0:2,0:2:6.02:0,6,87	0/0:23,0:11:16.22:0,16,191	0/0:19,0:10:15.10:0,15,158	0/1:9,4:10:22.37:101,0,22	0/1:6,5:11:25.48:127,0,25	0/1:2,6:11:76.76:104,0,77	1/1:4,0:5:2.72:12,3,0	1/1:0,5:5:8.98:87,9,0	0/0:13,0:14:29.58:0,30,383	0/0:6,0:6:18.04:0,18,225	1/1:2,5:6:15:145,15,0	0/0:13,0:13:33.10:0,33,455	0/1:2,2:4:17.78:47,0,18	0/0:12,0:12:36.10:0,36,485	0/0:9,0:9:24.07:0,24,326	0/0:29,1:30:46.07:0,46,910	0/1:7,15:22:26.92:333,0,27	0/0:4,0:3:0:0,0,0	1/1:2,9:10:24.01:233,24,0	0/1:2,5:7:10.60:127,0,11	1/1:1,15:16:42.05:407,42,0	0/0:9,0:10:21.05:0,21,271	0/0:15,0:17:34.48:0,34,321	0/1:6,7:14:7.80:137,0,8	0/0:15,0:16:41.61:0,42,540	1/1:3,12:16:35.76:332,36,0	0/0:14,1:15:3.01:0,3,325
chr10	89433472	.	G	GAAA	3535.65	PASS	AB=0.614;AC=16;AF=0.286;AN=56;BaseQRankSum=-0.025;DP=413;FS=2.143;HRun=11;HaplotypeScore=84.1398;InbreedingCoeff=0.6136;MQ=58.47;MQ0=2;MQRankSum=-3.111;QD=26.00;ReadPosRankSum=-4.003;VQSLOD=1.9817;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:38.57:0,39,634	0/0:5,0:5:9.01:0,9,105	0/0:16,0:9:4.17:0,4,61	0/0:15,0:7:4.62:0,5,89	1/1:7,11:18:27.40:343,27,0	0/1:5,10:15:37.09:379,0,37	0/1:2,10:12:40.07:385,0,40	0/0:12,0:13:32.87:0,33,336	1/1:9,2:12:23.92:281,24,0	0/0:14,0:15:39.01:0,39,422	0/0:7,0:9:8.84:0,9,148	1/1:7,3:10:22.83:268,23,0	0/0:18,0:18:44.84:0,45,456	1/1:5,12:20:42.10:728,42,0	0/0:13,0:13:26.96:0,27,305	0/0:14,0:14:31.83:0,32,355	0/0:31,0:34:18.49:0,18,645	0/1:7,6:13:3.26:360,0,3	0/0:10,0:10:20.99:0,21,245	0/0:10,0:10:29.96:0,30,329	0/1:5,6:10:48.60:261,0,49	1/1:4,2:6:12.02:165,12,0	0/0:11,0:11:24.43:0,24,267	0/0:15,0:16:19.16:0,19,410	1/1:13,2:15:25.47:366,25,0	0/0:30,0:30:60.02:0,60,689	0/0:7,0:8:14.83:0,15,140	0/0:13,0:13:32.97:0,33,342
chr10	89433721	.	AAAAT	A	5240.66	PASS	AB=0.833;AC=27;AF=0.519;AN=52;BaseQRankSum=11.205;DP=329;FS=1.698;HRun=0;HaplotypeScore=61.2448;InbreedingCoeff=0.8215;MQ=60.33;MQ0=0;MQRankSum=0.003;QD=28.02;ReadPosRankSum=1.151;VQSLOD=4.5711;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.19:0,69,1599	0/0:4,0:4:6.02:0,6,148	0/0:8,0:8:9.03:0,9,171	./.	1/1:5,14:17:27.09:448,27,0	1/1:3,11:14:30.10:497,30,0	1/1:2,9:11:24.08:398,24,0	1/1:11,10:20:24.04:324,24,0	1/1:2,8:10:20.99:292,21,0	0/0:14,0:14:27.05:0,27,610	0/0:9,0:9:21.05:0,21,466	1/1:3,9:12:18.06:298,18,0	0/0:3,0:3:3.01:0,3,74	1/1:3,8:11:21:316,21,0	0/0:11,0:11:21.07:0,21,508	0/1:4,1:5:37.68:38,0,186	0/0:26,0:26:60.15:0,60,1304	1/1:4,16:20:36.12:597,36,0	1/1:6,12:18:36.09:542,36,0	1/1:1,9:10:24.08:398,24,0	1/1:3,5:8:12.04:199,12,0	./.	0/0:4,0:4:6.02:0,6,148	0/0:2,0:2:3.01:0,3,74	1/1:1,12:13:27.09:448,27,0	0/0:14,0:14:27.08:0,27,617	1/1:2,13:15:27.09:448,27,0	0/0:16,0:16:45.15:0,45,1107
chr10	89434067	.	TA	T	195.25	PASS	AB=0.962;AC=9;AF=0.161;AN=56;BaseQRankSum=12.786;DP=613;FS=2.993;HRun=2;HaplotypeScore=102.6188;InbreedingCoeff=0.3322;MQ=87.26;MQ0=0;MQRankSum=-0.520;QD=1.54;ReadPosRankSum=2.331;VQSLOD=-0.5957;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,141,2106	1/1:10,0:10:16.08:72,16,0	0/0:24,0:24:72.07:0,72,1036	0/0:22,0:22:57.66:0,58,820	0/0:28,0:28:72.24:0,72,1078	0/0:24,0:24:63.21:0,63,938	0/0:26,0:26:69.22:0,69,1014	0/1:27,2:29:32.26:86,0,32	0/0:19,0:19:57.18:0,57,835	0/0:38,0:38:99:0,108,1546	0/0:13,0:13:39.13:0,39,585	0/0:31,0:31:90.30:0,90,1348	0/0:15,0:15:45.14:0,45,646	0/0:14,0:14:42.14:0,42,629	0/1:26,0:26:28.76:29,0,32	0/0:29,0:29:81.25:0,81,1174	0/1:21,0:21:13.21:13,0,36	0/0:25,0:25:69.23:0,69,1021	0/1:16,0:16:23.10:37,0,23	1/1:10,1:11:15.62:66,16,0	0/0:33,0:33:99:0,99,1478	0/0:8,0:8:24.04:0,24,335	0/0:7,0:7:21.07:0,21,315	0/0:25,0:25:72.22:0,72,1042	0/0:23,0:23:69.23:0,69,1033	0/0:21,0:21:63.21:0,63,927	0/1:12,2:14:30.55:43,0,31	0/0:10,0:10:30.10:0,30,450
chr10	89434068	.	A	AT	2523.13	PASS	AB=0.609;AC=13;AF=0.232;AN=56;BaseQRankSum=14.679;DP=607;FS=8.805;HRun=1;HaplotypeScore=94.7000;InbreedingCoeff=0.9038;MQ=87.54;MQ0=0;MQRankSum=-4.314;QD=20.51;ReadPosRankSum=0.572;VQSLOD=3.0331;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,141,1969	1/1:1,9:10:30.01:287,30,0	0/0:24,0:24:72.21:0,72,980	0/0:22,0:22:57.65:0,58,763	0/0:28,0:28:72.24:0,72,1007	0/0:24,0:24:63.21:0,63,878	0/0:26,0:26:69.22:0,69,948	1/1:8,21:29:35.02:622,35,0	0/0:19,0:19:57.19:0,57,794	0/0:37,0:37:99:0,108,1453	0/0:13,0:13:39.13:0,39,544	0/0:30,0:30:90.30:0,90,1258	0/0:15,0:15:45.14:0,45,609	0/0:14,0:14:42.14:0,42,586	1/1:3,22:25:41.81:584,42,0	0/0:28,0:28:81.24:0,81,1099	1/1:2,16:18:9.06:370,9,0	0/0:25,0:25:69.23:0,69,957	1/1:4,13:17:8.88:364,9,0	1/1:1,9:10:27.52:270,28,0	0/0:33,0:33:99:0,99,1382	0/0:8,0:8:24.04:0,24,314	0/0:7,0:7:21.07:0,21,294	0/0:26,0:26:72.22:0,72,976	0/0:23,0:23:69.23:0,69,963	0/0:22,0:22:63.20:0,63,865	0/1:5,9:14:4.15:211,0,4	0/0:10,0:10:30.10:0,30,420
chr10	89434069	.	A	AT	2701.42	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.529;DP=603;FS=5.884;HRun=0;HaplotypeScore=94.1413;InbreedingCoeff=0.9514;MQ=87.12;MQ0=0;MQRankSum=-3.552;QD=21.96;ReadPosRankSum=-0.574;VQSLOD=4.9513;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,141,1951	1/1:1,9:10:29.85:281,30,0	0/0:23,0:23:69.06:0,69,930	0/0:22,0:22:62.53:0,63,814	0/0:28,0:28:75.22:0,75,1013	0/0:24,0:24:63.21:0,63,879	0/0:26,0:26:66.21:0,66,905	1/1:8,21:29:62.94:671,63,0	0/0:19,0:19:57.19:0,57,797	0/0:34,0:34:99:0,99,1371	0/0:13,0:13:39.13:0,39,545	0/0:31,0:31:90.29:0,90,1240	0/0:14,0:14:42.14:0,42,587	0/0:14,0:14:42.14:0,42,587	1/1:3,22:25:72.85:665,73,0	0/0:28,0:28:81.25:0,81,1102	1/1:2,16:18:30.62:395,31,0	0/0:25,0:25:72.21:0,72,980	1/1:4,13:17:20.28:422,20,0	1/1:1,9:10:27.52:270,28,0	0/0:33,0:33:99:0,99,1383	0/0:8,0:8:21.07:0,21,293	0/0:7,0:7:21.07:0,21,294	0/0:25,0:25:72.21:0,72,972	0/0:23,0:23:69.22:0,69,948	0/0:22,0:22:63.20:0,63,866	1/1:5,9:14:0.54:189,1,0	0/0:10,0:10:30.10:0,30,419
chr10	89434109	.	TC	T	2916.58	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-4.396;DP=624;FS=1.897;HRun=5;HaplotypeScore=97.1523;InbreedingCoeff=0.9847;MQ=86.81;MQ0=0;MQRankSum=-1.556;QD=27.01;ReadPosRankSum=1.780;VQSLOD=3.4857;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,47:51:99:1531,135,0	0/0:6,0:6:18.06:0,18,246	0/0:19,0:19:30.63:0,31,572	0/0:24,0:24:34.01:0,34,560	0/0:24,0:24:67.85:0,68,505	1/1:1,28:29:72.20:813,72,0	1/1:3,25:28:63.18:715,63,0	0/0:26,0:26:49.39:0,49,310	0/0:17,0:17:49.95:0,50,383	0/0:32,0:32:90.25:0,90,1189	0/0:13,0:13:33.11:0,33,451	0/0:17,0:17:50.65:0,51,387	0/0:13,0:13:36.12:0,36,492	0/0:22,0:22:64.62:0,65,488	0/0:30,0:30:90.26:0,90,1209	0/0:20,0:20:60.20:0,60,821	0/0:21,0:21:60.17:0,60,801	0/0:25,0:25:63.82:0,64,460	0/0:30,0:30:80.09:0,80,572	0/0:20,0:20:32.07:0,32,220	0/0:59,0:59:99:0,153,1156	0/0:10,0:10:26.97:0,27,224	0/0:4,0:4:12.04:0,12,164	0/0:24,0:24:72.23:0,72,968	0/0:16,0:16:38.52:0,39,271	0/0:19,0:19:51.16:0,51,683	0/0:14,0:14:35.83:0,36,292	0/0:11,0:11:24.08:0,24,328
chr10	89434342	.	T	TC	11131.33	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-5.813;DP=777;FS=4.993;HRun=4;HaplotypeScore=114.4643;InbreedingCoeff=0.9997;MQ=83.24;MQ0=0;MQRankSum=-0.646;QD=37.10;ReadPosRankSum=2.771;VQSLOD=3.6552;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,180,2031	0/0:13,0:13:33.09:0,33,374	0/0:22,0:22:60.16:0,60,663	0/0:21,0:21:51.09:0,51,551	1/1:2,28:30:84.28:1148,84,0	0/0:30,0:30:87.25:0,87,986	0/0:34,0:34:95.93:0,96,1055	0/0:30,0:30:81.23:0,81,918	1/1:1,30:31:81.27:1108,81,0	0/0:33,0:33:87.25:0,87,987	0/0:17,0:17:45.13:0,45,510	1/1:1,25:27:72.23:974,72,0	1/1:3,20:23:60.20:815,60,0	1/1:2,22:24:66.22:903,66,0	0/0:42,0:42:99:0,114,1293	0/0:34,0:34:96.26:0,96,1079	0/0:31,0:31:87.25:0,87,987	1/1:1,19:20:51.17:698,51,0	0/0:23,0:23:60.16:0,60,673	0/0:20,0:20:54.14:0,54,603	1/1:2,45:47:99:1847,135,0	1/1:2,23:25:66.22:900,66,0	1/1:1,23:24:66:892,66,0	1/1:1,34:35:93.31:1272,93,0	1/1:0,14:14:42.14:574,42,0	0/0:23,0:23:63.17:0,63,706	0/0:34,0:34:93.27:0,93,1054	0/0:8,0:8:24.07:0,24,272
chr10	89434405	.	TAC	T	5853.66	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.583;DP=794;FS=1.056;HRun=0;HaplotypeScore=136.0397;InbreedingCoeff=0.9943;MQ=89.14;MQ0=0;MQRankSum=-2.425;QD=31.30;ReadPosRankSum=1.220;VQSLOD=6.5977;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,135,2234	1/1:0,5:5:12.04:158,12,0	0/0:30,0:30:67.12:0,67,1079	0/0:31,0:31:75.70:0,76,1230	0/0:27,0:27:78.22:0,78,1250	0/0:26,0:26:60.21:0,60,1028	0/0:27,0:27:69.22:0,69,1149	1/1:7,29:36:90.21:1118,90,0	0/0:34,0:34:84.27:0,84,1397	0/0:32,0:32:93.32:0,93,1589	0/0:13,0:13:33.10:0,33,534	0/0:27,0:27:69.22:0,69,1149	0/0:30,0:30:87.24:0,87,1402	0/0:25,0:25:75.20:0,75,1196	1/1:2,31:33:84.27:1103,84,0	0/0:21,0:21:63.22:0,63,1080	1/1:3,27:30:66.21:867,66,0	0/0:24,0:24:60.18:0,60,990	1/1:3,20:23:57.05:717,57,0	1/1:4,24:28:63.20:827,63,0	0/0:54,0:54:99:0,138,2245	0/0:19,0:19:48.16:0,48,813	0/0:24,0:24:60:0,60,1010	0/0:29,0:29:84.27:0,84,1406	0/0:28,0:28:81.28:0,81,1381	0/0:38,0:38:99:0,111,1878	1/1:5,27:32:81.26:1064,81,0	0/0:16,0:16:45.15:0,45,770
chr10	89434603	.	A	AATGGC	7826.89	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.042;DP=698;FS=1.376;HRun=0;HaplotypeScore=123.9429;InbreedingCoeff=0.9944;MQ=68.67;MQ0=0;MQRankSum=-7.081;QD=71.81;ReadPosRankSum=1.343;VQSLOD=6.4020;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,160,3272	1/1:1,11:12:30.10:937,30,0	0/0:19,0:18:44.53:0,45,909	0/0:24,0:23:57.87:0,58,1012	0/0:37,0:37:99:0,105,2105	1/1:0,22:22:54.19:1688,54,0	1/1:3,20:23:51.17:1546,51,0	0/0:40,0:40:99:0,108,2234	0/0:24,0:24:72.19:0,72,1413	0/0:17,0:17:51.17:0,51,1030	0/0:13,0:13:39.13:0,39,815	0/0:23,0:23:69.22:0,69,1432	0/0:25,0:25:72.25:0,72,1520	0/0:23,0:23:66.23:0,66,1405	1/1:3,23:26:69.24:2132,69,0	0/0:29,0:29:84.27:0,84,1699	1/1:4,21:26:51.17:1524,51,0	0/0:32,0:32:96.33:0,96,2028	0/0:22,0:22:66.23:0,66,1401	0/0:32,0:32:87.28:0,87,1773	0/0:35,0:35:99:0,99,1924	0/0:26,0:26:66.21:0,66,1349	0/0:20,0:20:60.21:0,60,1259	0/0:22,0:22:66.18:0,66,1290	0/0:24,0:23:69.23:0,69,1432	0/0:25,0:25:75.25:0,75,1544	0/0:18,0:18:54.19:0,54,1151	0/0:5,0:5:13.27:0,13,218
chr10	89436079	.	AAAAC	A	603.84	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=6.185;DP=395;FS=1.613;HRun=0;HaplotypeScore=77.7044;InbreedingCoeff=0.6894;MQ=70.95;MQ0=7;MQRankSum=-2.387;QD=5.39;ReadPosRankSum=3.600;VQSLOD=1.3974;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:70.20:0,70,942	0/0:6,0:6:9.01:0,9,144	0/0:37,0:18:14.05:0,14,437	0/0:29,0:17:22.93:0,23,203	1/1:15,0:15:6.16:54,6,0	0/0:15,0:15:29.70:0,30,260	0/0:16,0:14:29.62:0,30,228	0/1:12,0:12:10.29:55,0,10	1/1:4,0:4:2.95:34,3,0	0/0:18,0:18:48.01:0,48,677	0/0:20,0:20:51.19:0,51,589	1/1:8,1:9:6.16:70,6,0	0/0:10,0:10:25.21:0,25,338	1/1:8,1:8:5.36:37,5,0	0/0:5,0:5:15:0,15,161	0/0:7,0:7:17.42:0,17,274	0/0:21,0:21:44.67:0,45,438	1/1:17,0:17:22.86:229,23,0	1/1:6,0:6:8.85:65,9,0	0/1:10,0:10:6.70:26,0,7	1/1:7,0:7:3.13:35,3,0	1/1:1,0:1:2.80:13,3,0	0/0:8,0:8:20.85:0,21,245	0/0:17,0:17:50.94:0,51,714	1/1:2,6:8:3.79:43,4,0	0/0:28,0:28:68.99:0,69,921	1/1:14,0:14:13.44:131,13,0	0/0:16,0:16:44.41:0,44,517
chr10	89437845	.	T	TTC	1913.02	PASS	AB=0.792;AC=21;AF=0.404;AN=52;BaseQRankSum=-1.892;DP=631;FS=3.102;HRun=0;HaplotypeScore=111.6502;InbreedingCoeff=0.3354;MQ=63.84;MQ0=6;MQRankSum=-0.419;QD=5.80;ReadPosRankSum=-3.770;VQSLOD=2.3480;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,4:35:8.82:115,9,0	0/1:9,0:9:6.10:6,0,7	./.	./.	0/0:28,0:29:25.28:0,25,411	0/0:10,0:20:8.52:0,9,42	0/0:7,0:14:9.41:0,9,43	1/1:38,0:38:4.95:13,5,0	0/0:14,0:14:24.02:0,24,242	1/1:12,7:19:5.27:290,5,0	0/1:11,8:19:17.75:140,0,18	0/0:20,0:20:36.07:0,36,374	0/1:14,10:25:54.98:201,0,55	0/0:23,0:24:35.78:0,36,363	0/0:14,0:14:8.29:0,8,37	0/1:10,12:23:10.97:207,0,11	0/0:25,0:25:13.77:0,14,61	0/0:17,0:18:2.12:0,2,332	1/1:29,1:30:16.42:151,16,0	1/1:12,0:19:6.47:53,6,0	0/1:16,0:15:1.23:1,0,119	0/0:18,0:18:34.53:0,35,360	0/1:14,8:22:44.23:265,0,44	1/1:14,21:35:16.91:333,17,0	0/0:27,0:30:47.85:0,48,491	0/0:25,0:26:35.54:0,36,342	1/1:12,0:23:1.27:235,1,0	0/1:12,5:16:72.95:73,0,113
chr10	89437879	.	CTCTCTT	C	245.14	PASS	AB=0.984;AC=10;AF=0.179;AN=56;BaseQRankSum=2.571;DP=587;FS=2.457;HRun=0;HaplotypeScore=133.4674;InbreedingCoeff=0.4324;MQ=62.72;MQ0=8;MQRankSum=-3.564;QD=1.99;ReadPosRankSum=-1.192;VQSLOD=2.2765;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:36.05:0,36,467	1/1:4,8:12:4.72:74,5,0	0/1:13,0:8:2.92:3,0,77	0/0:16,0:10:10.82:0,11,102	0/0:36,0:36:29.94:0,30,1455	0/1:18,0:18:38.79:39,0,148	0/1:14,0:15:49.80:50,0,136	0/0:20,0:20:45.07:0,45,437	0/0:17,0:17:42.09:0,42,859	0/0:17,0:17:38.46:0,38,623	0/0:14,0:14:3.46:0,3,307	0/0:17,0:17:41.49:0,41,1089	0/0:23,0:23:45.46:0,45,772	0/0:16,0:16:45.61:0,46,1183	1/1:13,2:15:8.37:93,8,0	0/0:20,0:20:36:0,36,623	1/1:27,1:28:14.15:119,14,0	0/0:24,0:24:65.61:0,66,1290	0/1:22,0:21:11.99:12,0,610	0/0:16,0:17:7.44:0,7,508	0/0:19,0:19:45.07:0,45,845	0/0:20,0:20:28.16:0,28,1059	0/0:21,0:21:31.11:0,31,800	0/0:44,0:44:74.69:0,75,1119	0/0:25,0:24:59.74:0,60,1510	0/0:26,0:25:69.85:0,70,1361	0/0:21,0:21:47.62:0,48,1034	0/0:19,0:18:33.01:0,33,666
chr10	89437881	.	CTCTT	C	345.14	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=3.465;DP=591;FS=0.664;HRun=0;HaplotypeScore=117.6608;InbreedingCoeff=0.4760;MQ=64.61;MQ0=8;MQRankSum=-1.593;QD=2.52;ReadPosRankSum=-0.341;VQSLOD=2.0311;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:36.05:0,36,392	1/1:10,1:11:4.72:42,5,0	0/1:14,0:9:2.91:3,0,80	0/0:19,0:13:18.04:0,18,154	0/1:35,0:35:8.56:9,0,1103	0/0:20,0:20:7.58:0,8,196	0/1:18,0:18:1.23:1,0,207	0/0:19,0:20:21.18:0,21,371	0/0:17,0:17:41.74:0,42,637	0/0:18,0:18:40:0,40,428	0/0:15,0:15:3.54:0,4,229	0/0:17,0:17:40.84:0,41,816	0/0:24,0:24:20.15:0,20,542	0/0:16,0:16:45.58:0,46,864	1/1:2,13:15:8.86:150,9,0	0/0:20,0:20:35.99:0,36,476	1/1:2,25:27:15.05:264,15,0	0/0:23,0:23:61.35:0,61,943	0/1:17,0:16:14.43:14,0,457	0/0:16,0:16:10.44:0,10,394	0/0:20,0:20:43.26:0,43,618	0/0:20,0:20:30.51:0,31,801	0/0:21,0:21:31.11:0,31,599	0/0:45,0:45:74.20:0,74,922	0/0:26,0:25:39.74:0,40,1145	0/0:26,0:25:38.95:0,39,967	0/0:21,0:21:47.49:0,47,754	0/0:19,0:18:32.94:0,33,504
chr10	89439215	.	CACAG	C	975.31	PASS	AB=0.986;AC=16;AF=0.286;AN=56;BaseQRankSum=11.698;DP=571;FS=4.207;HRun=0;HaplotypeScore=137.7327;InbreedingCoeff=0.0222;MQ=55.62;MQ0=12;MQRankSum=-8.054;QD=4.62;ReadPosRankSum=3.528;VQSLOD=2.1128;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:68.63:0,69,1202	0/0:23,0:23:42.69:0,43,1422	0/0:21,0:10:16.89:0,17,184	0/0:28,0:19:14.36:0,14,256	0/1:16,0:16:69.26:98,0,69	0/1:28,0:28:2.67:3,0,186	0/1:18,0:18:55.74:56,0,90	0/0:24,0:21:2.31:0,2,304	1/1:14,1:15:0.66:175,1,0	0/0:28,0:27:74.85:0,75,1273	0/0:15,0:14:11.55:0,12,571	1/1:13,0:13:4.32:170,4,0	0/0:21,0:21:43.74:0,44,859	0/1:21,2:22:98.56:209,0,99	0/0:20,1:20:14.53:0,15,629	0/0:24,0:24:51.09:0,51,1018	0/0:25,0:24:20.16:0,20,1357	0/1:5,0:5:16.20:16,0,24	0/1:16,0:15:39.05:39,0,221	0/1:13,0:13:63.28:83,0,63	0/1:19,0:18:42.63:43,0,87	0/1:15,1:16:26.54:27,0,76	0/0:23,0:23:63.12:0,63,1182	0/0:35,0:35:96.19:0,96,1905	1/1:11,0:9:14.93:120,15,0	0/0:17,0:16:45.10:0,45,913	0/1:18,0:17:60.57:96,0,61	0/0:16,0:16:48.08:0,48,925
chr10	89439219	.	GACAC	G	2737.79	PASS	AB=0.864;AC=24;AF=0.429;AN=56;BaseQRankSum=6.401;DP=562;FS=0.476;HRun=0;HaplotypeScore=133.2343;InbreedingCoeff=0.5266;MQ=54.35;MQ0=14;MQRankSum=-5.743;QD=10.57;ReadPosRankSum=1.185;VQSLOD=3.1463;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:35:50.51:0,51,814	0/0:23,0:23:10.73:0,11,1116	0/0:19,0:9:6:0,6,65	0/0:25,0:16:2.99:0,3,23	1/1:10,4:14:17.84:213,18,0	0/1:19,10:29:29.10:104,0,29	0/1:12,3:14:4.35:90,0,4	1/1:24,0:21:12.58:140,13,0	1/1:14,2:16:27.03:343,27,0	0/0:28,0:29:45.98:0,46,899	0/1:14,0:13:25.44:25,0,383	1/1:8,5:13:27.05:375,27,0	0/0:20,0:20:29.51:0,30,634	1/1:17,5:22:33.04:437,33,0	0/1:16,1:17:22.69:23,0,450	0/0:16,0:22:41.59:0,42,824	0/0:26,0:27:59.52:0,60,1200	0/0:6,0:6:3.47:0,3,25	0/1:15,1:15:1.70:190,0,2	0/1:9,3:13:4.06:184,0,4	1/1:20,0:18:1.95:123,2,0	1/1:16,0:15:9.02:118,9,0	0/0:23,0:25:56.27:0,56,1036	0/0:35,0:35:79.80:0,80,1696	1/1:7,3:8:15.05:224,15,0	0/0:18,0:17:40.35:0,40,821	1/1:16,1:17:32.22:344,32,0	0/0:16,0:16:36.08:0,36,732
chr10	89439237	.	CACACACAGACACACACACAG	C	6937.73	PASS	AB=0.983;AC=24;AF=0.429;AN=56;BaseQRankSum=6.531;DP=572;FS=0.421;HRun=0;HaplotypeScore=262.4681;InbreedingCoeff=0.6808;MQ=48.54;MQ0=28;MQRankSum=-7.920;QD=26.08;ReadPosRankSum=-0.986;VQSLOD=3.3531;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:51.04:0,51,1649	0/0:25,0:24:19.74:0,20,3157	0/0:7,0:3:6:0,6,65	0/0:7,0:2:2.99:0,3,23	1/1:19,0:19:25.31:655,25,0	0/1:27,0:27:40.98:41,0,270	0/1:18,0:15:27.70:54,0,28	1/1:23,0:18:34.25:463,34,0	1/1:20,2:21:30.10:932,30,0	0/0:26,0:21:61.01:0,61,2859	0/0:16,0:14:36.09:0,36,1753	1/1:20,0:20:30.04:776,30,0	0/0:20,0:20:54.08:0,54,2767	1/1:22,0:21:33.11:1016,33,0	0/0:19,0:18:42.04:0,42,2186	0/0:23,0:23:54.16:0,54,2962	0/0:32,0:31:70.15:0,70,3689	0/1:10,0:9:13.82:103,0,14	1/1:14,0:12:29.92:456,30,0	0/1:13,1:14:4.04:554,0,4	1/1:25,0:22:11.69:146,12,0	1/1:14,0:13:9.03:143,9,0	0/0:24,0:23:62.58:0,63,3067	0/0:34,0:34:97.88:0,98,5936	1/1:21,0:18:24.47:562,24,0	0/0:23,0:21:60.21:0,60,3281	1/1:15,1:16:33.66:1037,34,0	0/0:15,0:15:39.09:0,39,2680
chr10	89439247	.	CACACACACAGACAG	C	6007.10	PASS	AB=1.000;AC=25;AF=0.463;AN=54;BaseQRankSum=9.368;DP=597;FS=0.451;HRun=0;HaplotypeScore=229.0286;InbreedingCoeff=0.7727;MQ=49.48;MQ0=31;MQRankSum=-7.028;QD=21.45;ReadPosRankSum=-3.212;VQSLOD=3.3825;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:30.02:0,30,837	0/0:25,0:23:48.13:0,48,1693	./.	0/0:17,0:3:2.50:0,3,28	1/1:18,4:22:29.80:744,30,0	0/1:26,0:26:23.84:24,0,219	0/1:21,0:18:7.19:39,0,7	1/1:27,0:22:44.63:579,45,0	1/1:21,3:22:18.53:590,19,0	0/0:29,0:24:46.80:0,47,2125	0/0:16,0:14:36.12:0,36,1376	1/1:15,5:20:21.04:741,21,0	0/0:20,0:20:54.06:0,54,2097	1/1:21,6:25:33.11:1002,33,0	0/0:20,0:18:37.76:0,38,1331	0/0:21,0:21:51.16:0,51,2099	0/0:32,0:31:54.95:0,55,1954	1/1:8,0:7:9.03:174,9,0	1/1:14,0:12:27.03:432,27,0	1/1:13,3:16:16.74:447,17,0	0/1:21,0:18:0.13:0,0,0	1/1:12,0:11:1.25:3,1,0	0/0:25,0:24:54.99:0,55,2125	0/0:35,0:35:84.29:0,84,4337	1/1:20,3:21:20.54:537,21,0	0/0:25,0:23:69.21:0,69,2401	1/1:17,2:18:35.03:695,35,0	0/0:12,0:12:33.11:0,33,1862
chr10	89439255	.	CAGACAG	C	2516.49	PASS	AB=0.938;AC=25;AF=0.481;AN=52;BaseQRankSum=11.699;DP=612;FS=0.917;HRun=0;HaplotypeScore=175.3430;InbreedingCoeff=0.7734;MQ=49.80;MQ0=37;MQRankSum=-7.736;QD=8.44;ReadPosRankSum=-1.260;VQSLOD=2.3945;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:30.83:0,31,478	0/0:21,0:19:47.64:0,48,1007	./.	0/1:28,0:6:0.61:1,0,40	1/1:25,0:25:34.01:317,34,0	0/1:20,0:26:53.75:73,0,54	1/1:8,8:18:8.86:69,9,0	1/1:28,0:23:32.56:345,33,0	1/1:22,0:20:17.76:202,18,0	0/0:27,0:22:60.16:0,60,1710	0/0:16,0:14:35.95:0,36,955	1/1:18,0:18:0.04:263,0,0	0/0:20,0:20:57.07:0,57,1655	1/1:27,0:26:29.64:426,30,0	0/0:21,0:19:42.13:0,42,938	0/0:21,0:21:54.17:0,54,1515	0/0:29,0:29:51.23:0,51,1275	1/1:7,0:6:8.96:69,9,0	1/1:14,1:11:4.56:135,5,0	1/1:16,0:16:15.52:196,16,0	0/1:20,0:17:0:0,0,0	./.	0/0:24,0:23:58.04:0,58,1477	0/0:34,0:34:90.31:0,90,2912	1/1:23,0:21:17.37:204,17,0	0/0:26,0:25:58.36:0,58,1992	1/1:22,0:21:39.11:411,39,0	0/0:14,0:14:39.13:0,39,1191
chr10	89439259	.	CAG	C	2956.11	PASS	AB=0.978;AC=26;AF=0.500;AN=52;BaseQRankSum=9.532;DP=610;FS=1.922;HRun=0;HaplotypeScore=135.6297;InbreedingCoeff=0.7268;MQ=51.19;MQ0=38;MQRankSum=-4.877;QD=10.19;ReadPosRankSum=-1.446;VQSLOD=3.1246;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:16.64:0,17,131	0/1:19,0:17:8.64:9,0,358	0/0:18,0:3:8.71:0,9,64	0/0:31,0:7:8.18:0,8,66	1/1:10,17:27:17.51:349,18,0	1/1:20,6:26:11.03:125,11,0	1/1:15,5:17:8.61:52,9,0	1/1:18,6:21:15.54:532,16,0	1/1:10,11:19:5.76:144,6,0	0/0:24,0:19:48.58:0,49,866	0/0:15,0:14:16.70:0,17,469	1/1:7,13:20:0.36:237,0,0	0/0:21,0:21:49.42:0,49,915	1/1:10,19:28:38.96:450,39,0	0/0:21,0:19:38.96:0,39,379	0/0:20,0:20:40.23:0,40,781	0/0:28,1:28:19.55:0,20,499	1/1:0,7:6:9.03:134,9,0	1/1:7,9:11:26.99:321,27,0	1/1:7,9:16:12.40:109,12,0	./.	./.	0/1:21,1:21:31.67:32,0,635	0/0:31,1:32:46.83:0,47,1546	1/1:8,16:22:4.62:263,5,0	0/0:28,0:27:36.07:0,36,1069	1/1:17,2:18:20.42:397,20,0	0/0:15,0:15:38.84:0,39,667
chr10	89439261	.	G	GACACACAC	745.66	PASS	AB=0.959;AC=17;AF=0.315;AN=54;BaseQRankSum=4.596;DP=616;FS=1.950;HRun=0;HaplotypeScore=192.6261;InbreedingCoeff=0.1470;MQ=51.27;MQ0=37;MQRankSum=-2.692;QD=2.63;ReadPosRankSum=-3.591;VQSLOD=2.0400;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,19:36:1.81:9,2,0	0/1:9,0:18:1.43:1,0,200	0/0:19,0:3:8.60:0,9,45	0/0:34,0:7:5.39:0,5,77	0/1:26,0:27:39.68:84,0,40	1/1:26,0:26:20.36:323,20,0	1/1:20,0:17:6.02:125,6,0	0/1:22,0:20:24.40:92,0,24	0/1:20,0:18:17.42:17,0,123	0/0:22,0:19:36.24:0,36,753	0/0:14,0:14:27.55:0,28,568	0/0:20,0:20:14.24:0,14,170	0/0:21,0:21:48.13:0,48,1077	0/1:30,0:29:31.87:32,0,188	0/0:3,0:19:32.04:0,32,233	0/0:18,0:19:39.13:0,39,920	0/0:10,0:30:47.43:0,47,313	1/1:7,0:6:8.94:68,9,0	0/1:16,0:11:48.18:48,0,138	0/1:15,0:15:31.11:31,0,78	0/0:21,0:17:0:0,0,0	./.	0/0:18,0:19:42.14:0,42,969	0/0:32,0:32:81.25:0,81,1928	0/1:25,0:23:42.94:43,0,80	0/0:27,0:27:38.12:0,38,1035	0/1:18,0:17:33.17:33,0,124	0/0:15,0:15:32.94:0,33,756
chr10	89439833	.	AACAC	A	10107.38	PASS	AB=0.760;AC=28;AF=0.500;AN=56;BaseQRankSum=8.289;DP=792;FS=1.833;HRun=0;HaplotypeScore=158.9390;InbreedingCoeff=0.8810;MQ=70.47;MQ0=3;MQRankSum=-2.480;QD=26.39;ReadPosRankSum=3.295;VQSLOD=5.0390;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:96.04:0,96,2256	0/0:3,0:11:27.09:0,27,482	0/0:49,0:37:63.20:0,63,1390	0/0:52,0:49:91.19:0,91,2080	1/1:2,19:21:30.06:461,30,0	1/1:4,16:20:33.11:550,33,0	0/1:12,17:31:8.14:545,0,8	1/1:11,16:28:51.17:823,51,0	1/1:4,25:30:56.48:1094,56,0	0/0:24,0:24:56.65:0,57,1203	0/0:15,0:17:38.58:0,39,790	1/1:5,24:29:57.19:957,57,0	0/0:27,0:29:62.86:0,63,1583	1/1:2,22:24:51.17:856,51,0	0/0:9,0:31:69.24:0,69,1244	0/0:43,0:45:99:0,111,2610	0/0:10,0:35:69.24:0,69,1239	1/1:6,19:25:45.15:756,45,0	1/1:6,10:16:27.07:404,27,0	1/1:3,16:19:27.06:453,27,0	1/1:15,48:63:41.51:1398,42,0	1/1:6,15:21:27.08:431,27,0	0/1:16,1:18:5.52:6,0,824	0/0:42,0:43:99:0,117,2706	1/1:4,15:20:42.14:691,42,0	0/0:24,0:25:59.94:0,60,1413	1/1:3,14:18:42.14:683,42,0	0/0:7,0:7:21.07:0,21,520
chr10	89440488	.	GAGGAGGA	G	17026.18	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=17.284;DP=654;FS=2.646;HRun=0;HaplotypeScore=163.6123;InbreedingCoeff=0.9966;MQ=85.40;MQ0=1;MQRankSum=-18.680;QD=53.88;ReadPosRankSum=2.600;VQSLOD=4.5650;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.28:0,93,3333	0/0:8,0:8:24.08:0,24,867	0/0:28,0:27:71.23:0,71,2032	0/0:29,0:29:81.22:0,81,2560	1/1:0,29:29:59.88:1444,60,0	1/1:3,15:18:39.13:981,39,0	1/1:7,26:33:66.23:1659,66,0	1/1:6,19:25:51.15:1217,51,0	1/1:3,28:31:78.27:1958,78,0	0/0:30,0:30:84.20:0,84,3050	0/0:16,0:16:45.02:0,45,1579	1/1:3,22:25:60.21:1486,60,0	0/0:28,0:28:75.26:0,75,2867	1/1:1,22:23:63.22:1585,63,0	0/0:32,0:32:87.28:0,87,3258	0/0:26,0:26:75.24:0,75,2737	0/0:21,0:21:57.18:0,57,1990	1/1:2,14:16:33.11:792,33,0	1/1:3,7:10:21.07:508,21,0	1/1:2,13:15:39.13:946,39,0	1/1:6,11:16:14.73:377,15,0	1/1:3,16:19:42.14:1054,42,0	0/0:17,0:17:48.16:0,48,1789	0/0:30,0:30:87.30:0,87,3217	1/1:2,18:20:48.16:1207,48,0	0/0:30,0:30:78.27:0,78,2939	1/1:5,30:35:72.25:1810,72,0	0/0:11,0:11:27.09:0,27,969
chr10	89442794	.	A	AC	1332.98	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.513;DP=681;FS=0.000;HRun=5;HaplotypeScore=68.1526;InbreedingCoeff=0.9973;MQ=83.85;MQ0=1;MQRankSum=-2.734;QD=28.36;ReadPosRankSum=-0.528;VQSLOD=3.6207;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,1283	0/0:10,0:10:27.05:0,27,282	0/0:30,0:30:68.13:0,68,719	0/0:26,0:25:49.03:0,49,516	0/0:26,0:26:66.02:0,66,706	1/1:2,18:20:54.18:708,54,0	1/1:4,23:27:57.18:747,57,0	0/0:31,0:31:81.18:0,81,854	0/0:21,0:21:63.13:0,63,667	0/0:30,0:30:87.20:0,87,925	0/0:7,0:7:21.05:0,21,226	0/0:21,0:21:63.16:0,63,677	0/0:18,0:18:48.12:0,48,516	0/0:31,0:31:78.19:0,78,838	0/0:19,0:19:57.14:0,57,613	0/0:22,0:22:54.13:0,54,575	0/0:32,0:32:90.21:0,90,959	0/0:35,0:34:90.19:0,90,956	0/0:20,0:20:51.07:0,51,517	0/0:20,0:20:54.13:0,54,580	0/0:35,0:35:99:0,99,1064	0/0:22,0:22:63.16:0,63,675	0/0:15,0:15:39.09:0,39,419	0/0:22,0:22:63.16:0,63,677	0/0:17,0:17:48.12:0,48,510	0/0:28,0:28:69.16:0,69,735	0/0:34,0:34:99:0,99,1056	0/0:18,0:18:54.08:0,54,559
chr10	89443144	.	G	GA	3776.04	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-10.827;DP=769;FS=11.284;HRun=4;HaplotypeScore=75.9927;InbreedingCoeff=0.9955;MQ=83.93;MQ0=1;MQRankSum=-0.912;QD=34.64;ReadPosRankSum=-0.985;VQSLOD=3.0262;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,1191	0/0:5,0:5:15.04:0,15,170	0/0:27,0:26:66.11:0,66,718	0/0:27,0:26:59.13:0,59,620	0/0:23,0:23:57.16:0,57,646	0/0:15,0:15:39.11:0,39,442	0/0:36,0:36:99:0,108,1203	1/1:2,19:21:57.14:717,57,0	0/0:32,0:32:96.27:0,96,1089	0/0:34,0:34:99:0,99,1123	0/0:14,0:14:33.09:0,33,374	0/0:35,0:35:99:0,99,1122	0/0:34,0:34:93.26:0,93,1055	0/0:30,0:30:84.24:0,84,952	0/0:30,0:30:87.23:0,87,975	0/0:39,0:38:99:0,111,1240	0/0:35,0:35:96.22:0,96,1064	0/0:25,0:25:69.14:0,69,755	1/1:4,24:28:75.21:989,75,0	1/1:2,26:28:69.19:921,69,0	0/0:42,0:42:99:0,123,1382	0/0:20,0:20:57.16:0,57,645	0/0:29,0:29:81.22:0,81,908	0/0:34,0:34:99:0,99,1123	0/0:19,0:19:51.14:0,51,579	0/0:25,0:25:66.18:0,66,749	1/1:3,29:32:84.28:1148,84,0	0/0:12,0:12:36.10:0,36,408
chr10	89443533	.	AATGATGATGATGATGATGATG	A	8408.37	PASS	AC=26;AF=0.481;AN=54;BaseQRankSum=10.452;DP=562;FS=7.700;HRun=0;HaplotypeScore=295.8945;InbreedingCoeff=0.8167;MQ=71.47;MQ0=9;MQRankSum=-9.033;QD=33.77;ReadPosRankSum=0.306;VQSLOD=2.3677;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:29:48.16:0,48,3381	0/0:7,0:7:9.03:0,9,446	0/0:16,0:10:3.01:0,3,37	0/0:21,0:18:3.01:0,3,40	1/1:17,10:27:24.08:985,24,0	1/1:14,0:22:15.05:733,15,0	1/1:12,0:12:3:27,3,0	1/1:30,0:29:2.84:14,3,0	1/1:15,5:20:15.05:831,15,0	0/0:31,0:30:60.20:0,60,3539	0/0:11,0:11:21.06:0,21,1504	1/1:8,8:16:5.89:332,6,0	0/0:22,0:24:51.15:0,51,3824	1/1:14,12:26:21.07:1159,21,0	0/0:21,0:25:24.07:0,24,1716	0/0:36,0:36:78.27:0,78,6640	0/0:21,0:27:22.63:0,23,1111	1/1:12,3:15:3.01:166,3,0	1/1:5,0:7:6.02:293,6,0	1/1:10,0:15:13.29:546,13,0	./.	1/1:5,10:15:24.08:1153,24,0	0/0:20,0:20:45.14:0,45,3216	0/0:22,0:22:48.16:0,48,4152	1/1:11,5:15:9.03:499,9,0	0/0:27,0:27:54.18:0,54,4734	1/1:10,0:26:36.12:1670,36,0	0/0:6,0:6:15.05:0,15,1004
chr10	89445578	.	A	ATAGTT	9695.75	PASS	AB=0.600;AC=27;AF=0.482;AN=56;BaseQRankSum=10.254;DP=384;FS=0.437;HRun=0;HaplotypeScore=78.0309;InbreedingCoeff=0.8584;MQ=67.39;MQ0=9;MQRankSum=-12.073;QD=76.95;ReadPosRankSum=4.449;VQSLOD=6.7362;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.33:0,96,2236	0/0:5,0:5:15.05:0,15,350	0/0:16,0:13:35.85:0,36,680	0/0:12,0:7:6.02:0,6,133	1/1:0,10:10:30.10:966,30,0	1/1:0,14:14:39.13:1295,39,0	1/1:3,6:8:18.06:598,18,0	1/1:2,5:4:12.04:399,12,0	1/1:0,3:3:9.03:299,9,0	0/0:24,0:24:66.19:0,66,1428	0/0:20,0:20:57.20:0,57,1328	1/1:1,6:6:18.06:597,18,0	0/0:12,0:12:36.12:0,36,834	1/1:0,9:10:24.08:796,24,0	0/0:14,0:14:26.95:0,27,628	0/0:20,0:19:57.19:0,57,1250	0/0:42,1:43:8.75:0,9,2303	1/1:3,6:9:18.04:598,18,0	1/1:1,6:8:21.06:626,21,0	1/1:0,10:10:30.10:996,30,0	0/1:3,6:7:29.48:468,0,29	1/1:1,8:10:21.07:675,21,0	0/0:11,0:11:30.10:0,30,699	0/0:24,0:23:69.24:0,69,1608	1/1:1,10:12:30.10:984,30,0	0/0:20,0:20:60.21:0,60,1388	1/1:0,4:5:12.04:399,12,0	0/0:1,0:1:3.01:0,3,70
chr10	89445653	.	G	GA	614.29	PASS	AB=1.000;AC=10;AF=0.294;AN=34;BaseQRankSum=4.874;DP=225;FS=0.914;HRun=7;HaplotypeScore=55.0135;InbreedingCoeff=0.5095;MQ=34.32;MQ0=61;MQRankSum=-2.058;QD=7.31;ReadPosRankSum=-2.567;VQSLOD=-0.3937;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:16:18.37:116,18,0	1/1:2,2:3:3.01:36,3,0	0/1:1,0:1:0:0,0,0	./.	./.	./.	./.	0/0:10,0:3:5.99:0,6,52	./.	0/0:13,0:11:17.98:0,18,165	0/0:11,0:10:6.73:0,7,155	./.	0/0:9,0:7:6.84:0,7,108	./.	1/1:3,11:13:17.91:217,18,0	0/1:19,0:19:4.50:4,0,198	1/1:14,13:22:30.09:362,30,0	./.	0/0:12,0:1:3:0,3,29	./.	0/0:2,0:2:2.97:0,3,21	0/0:5,0:2:0:0,0,0	0/0:12,0:10:4.46:0,4,54	0/0:13,0:11:9.84:0,10,112	./.	0/0:10,0:9:8.57:0,9,86	./.	0/0:12,0:9:1.83:0,2,27
chr10	89445830	.	C	CT	7798.79	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-10.463;DP=520;FS=1.638;HRun=9;HaplotypeScore=51.1510;InbreedingCoeff=0.9470;MQ=67.66;MQ0=0;MQRankSum=-1.244;QD=26.53;ReadPosRankSum=-0.188;VQSLOD=5.0857;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,117,1016	0/0:13,0:13:32.99:0,33,287	0/0:9,0:9:4.76:0,5,86	0/0:8,0:8:1.30:0,1,79	1/1:0,16:16:36.10:398,36,0	1/1:1,21:22:60.16:664,60,0	1/1:7,15:22:42.11:465,42,0	1/1:6,31:37:87.20:942,87,0	1/1:2,12:15:32.92:346,33,0	0/0:20,1:21:14.79:0,15,358	0/0:11,0:11:20.99:0,21,182	1/1:0,11:11:30.08:332,30,0	0/0:8,0:8:17.99:0,18,156	1/1:2,20:22:57.15:630,57,0	0/0:15,0:15:29.99:0,30,260	0/0:18,0:18:41.97:0,42,365	0/0:22,0:22:56.98:0,57,495	1/1:1,10:11:27.07:299,27,0	1/1:7,22:29:63.17:697,63,0	1/1:1,20:21:60.12:650,60,0	1/1:2,24:26:66.18:730,66,0	1/1:1,22:23:63.14:684,63,0	0/0:10,0:10:26.98:0,27,234	0/0:10,0:10:26.99:0,27,234	1/1:2,14:16:33.09:365,33,0	0/0:20,0:20:47.97:0,48,417	1/1:1,21:23:54.14:597,54,0	0/0:18,0:18:38.99:0,39,339
chr10	89446019	.	AG	A	12959.27	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=12.314;DP=677;FS=1.583;HRun=1;HaplotypeScore=69.3124;InbreedingCoeff=0.9999;MQ=84.75;MQ0=0;MQRankSum=-2.525;QD=38.80;ReadPosRankSum=-1.061;VQSLOD=4.9648;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,166,2585	0/0:11,0:11:30.10:0,30,478	0/0:24,0:24:69.13:0,69,951	0/0:18,1:18:53.91:0,54,728	1/1:0,19:19:54.09:709,54,0	1/1:0,23:23:66.22:922,66,0	1/1:0,23:23:66.22:923,66,0	1/1:0,38:38:99:1484,111,0	1/1:0,19:19:51.17:709,51,0	0/0:29,0:29:87.30:0,87,1389	0/0:18,0:18:54.05:0,54,781	1/1:0,19:19:54.18:753,54,0	0/0:18,0:18:54.06:0,54,782	1/1:0,25:25:69.23:964,69,0	0/0:22,0:22:66.21:0,66,1028	0/0:26,0:26:75.17:0,75,1142	0/0:28,0:28:84.27:0,84,1314	1/1:0,19:19:54.18:755,54,0	1/1:0,28:28:84.24:1123,84,0	1/1:0,21:21:63.21:879,63,0	1/1:0,20:20:48.16:666,48,0	1/1:0,19:19:53.98:683,54,0	0/0:29,0:29:81.15:0,81,1210	0/0:29,0:29:87.28:0,87,1366	1/1:0,32:32:90.30:1257,90,0	0/0:21,0:21:60.18:0,60,915	1/1:0,29:29:81.27:1131,81,0	0/0:14,0:14:42.14:0,42,668
chr10	89448878	.	TCCCCAGC	T	3960.56	PASS	AB=0.864;AC=17;AF=0.327;AN=52;BaseQRankSum=5.632;DP=337;FS=12.951;HRun=0;HaplotypeScore=87.4214;InbreedingCoeff=0.6994;MQ=34.86;MQ0=30;MQRankSum=-4.460;QD=29.56;ReadPosRankSum=-0.623;VQSLOD=1.9516;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:11:24.07:0,24,841	0/0:6,0:4:12:0,12,382	./.	./.	1/1:4,6:7:18.05:357,18,0	0/1:7,0:6:47.83:119,0,48	0/1:21,0:15:29.73:327,0,30	0/0:24,0:20:54.18:0,54,1999	1/1:2,10:11:27.04:627,27,0	0/0:9,0:8:24.08:0,24,969	0/0:9,0:7:17.72:0,18,686	1/1:4,12:13:27.04:682,27,0	0/0:15,0:13:36.12:0,36,1319	1/1:0,15:10:12.04:322,12,0	0/0:10,0:10:24.06:0,24,706	0/0:10,0:9:15.05:0,15,587	0/0:17,0:13:36.12:0,36,1295	1/1:2,12:9:12.04:334,12,0	0/0:13,0:11:30.06:0,30,1068	0/0:17,0:17:45.08:0,45,1732	0/1:4,9:10:13.94:69,0,14	1/1:3,7:10:21.07:545,21,0	0/0:9,0:9:24.08:0,24,898	0/0:8,0:5:15.04:0,15,412	1/1:6,10:15:26.98:579,27,0	0/0:24,0:23:66.23:0,66,2585	0/0:11,0:10:23.60:0,24,836	0/0:8,0:5:6.02:0,6,243
chr10	89448881	.	CCA	C	691.56	PASS	AC=20;AF=0.385;AN=52;BaseQRankSum=10.156;DP=315;FS=19.900;HRun=0;HaplotypeScore=70.6899;InbreedingCoeff=0.8972;MQ=33.92;MQ0=29;MQRankSum=-4.538;QD=5.91;ReadPosRankSum=1.012;VQSLOD=1.1185;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:10:21.07:0,21,424	0/0:6,0:4:9.03:0,9,182	./.	./.	1/1:9,0:6:7.04:53,7,0	1/1:0,3:3:8.81:57,9,0	1/1:6,10:11:20.70:156,21,0	0/0:23,0:19:54.18:0,54,1056	1/1:10,0:9:20.69:132,21,0	0/0:9,0:8:24.08:0,24,487	0/0:9,0:7:17.91:0,18,364	1/1:15,0:12:23.22:132,23,0	0/0:15,0:13:36.12:0,36,700	1/1:15,0:10:11.50:64,11,0	0/0:8,0:8:18.05:0,18,330	0/0:10,0:9:15.05:0,15,304	0/0:19,0:15:39.06:0,39,698	1/1:14,0:9:11.67:67,12,0	0/0:11,0:10:30.06:0,30,566	0/0:17,0:17:45.15:0,45,899	1/1:12,0:9:2.04:6,2,0	1/1:8,0:8:17.71:93,18,0	0/0:9,0:9:24.07:0,24,450	0/0:7,0:4:12:0,12,202	1/1:13,0:12:20.51:129,21,0	0/0:25,0:23:66.23:0,66,1325	0/0:10,0:9:20.87:0,21,425	0/0:8,0:5:6.02:0,6,122
chr10	89448884	.	GCTCCGA	G	1873.40	PASS	AC=20;AF=0.385;AN=52;BaseQRankSum=10.057;DP=304;FS=20.376;HRun=0;HaplotypeScore=82.1414;InbreedingCoeff=0.8965;MQ=32.50;MQ0=29;MQRankSum=-2.980;QD=16.88;ReadPosRankSum=1.743;VQSLOD=1.4770;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:10:21.07:0,21,532	0/0:5,0:3:9.03:0,9,210	./.	./.	1/1:8,0:5:9.03:137,9,0	1/1:1,3:3:9.02:128,9,0	1/1:5,10:9:21.07:358,21,0	0/0:22,0:18:53.85:0,54,1173	1/1:10,0:9:21.07:322,21,0	0/0:9,0:8:24.08:0,24,596	0/0:9,0:7:18.06:0,18,402	1/1:14,0:11:24.03:318,24,0	0/0:14,0:12:33.11:0,33,775	1/1:15,0:10:12.03:167,12,0	0/0:7,0:7:15.05:0,15,376	0/0:10,0:9:15.04:0,15,353	0/0:18,0:14:33.11:0,33,856	1/1:14,0:9:12.04:162,12,0	0/0:10,0:9:27.09:0,27,659	0/0:16,0:16:42.07:0,42,1078	1/1:12,0:9:2.67:19,3,0	1/1:7,0:7:18.04:218,18,0	0/0:10,0:10:21.07:0,21,586	0/0:7,0:4:9.02:0,9,194	1/1:11,0:11:17.92:246,18,0	0/0:26,0:24:69.23:0,69,1646	0/0:10,0:9:20.82:0,21,502	0/0:8,0:5:6.02:0,6,127
chr10	89448889	.	GA	G	3523.51	PASS	AB=0.830;AC=50;AF=0.926;AN=54;BaseQRankSum=-5.438;DP=375;FS=3.500;HRun=8;HaplotypeScore=101.6171;InbreedingCoeff=0.1877;MQ=32.25;MQ0=36;MQRankSum=1.117;QD=9.55;ReadPosRankSum=5.533;VQSLOD=1.7280;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,8:10:12.02:116,12,0	1/1:4,1:3:3:29,3,0	0/0:4,0:1:0.47:0,0,1	./.	1/1:7,6:10:9.01:84,9,0	1/1:4,0:3:2.72:34,3,0	1/1:16,0:10:20.34:138,20,0	1/1:6,12:15:29.15:310,29,0	1/1:4,11:13:20.02:197,20,0	1/1:8,5:12:16.78:171,17,0	1/1:9,6:12:17.84:173,18,0	1/1:11,12:17:16.25:166,16,0	1/1:7,9:14:17.07:222,17,0	1/1:7,10:12:10:99,10,0	0/1:8,4:12:2.94:53,0,3	1/1:9,7:14:2.46:53,2,0	1/1:9,10:15:17.36:172,17,0	1/1:6,11:11:7.74:109,8,0	1/1:6,6:11:17.82:173,18,0	1/1:5,10:15:21.02:202,21,0	1/1:5,5:8:2.92:29,3,0	1/1:8,3:11:8.87:77,9,0	1/1:4,6:10:8.93:86,9,0	0/1:9,1:5:0.03:0,0,0	1/1:2,10:11:15.02:142,15,0	1/1:10,20:26:48.50:487,48,0	1/1:7,8:14:17.88:173,18,0	1/1:9,5:10:2.97:29,3,0
chr10	89448920	.	ATC	A	6359.88	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.458;DP=336;FS=10.283;HRun=0;HaplotypeScore=89.6284;InbreedingCoeff=0.7433;MQ=41.00;MQ0=16;MQRankSum=0.379;QD=20.92;ReadPosRankSum=0.267;VQSLOD=4.8358;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,7:12:20.65:246,21,0	1/1:2,1:3:6.02:74,6,0	0/0:21,0:4:10.28:0,10,125	0/0:11,0:4:4.51:0,5,13	1/1:2,6:11:20.40:240,20,0	1/1:3,5:8:23.11:184,23,0	1/1:5,7:11:32.79:290,33,0	1/1:8,4:10:23.87:255,24,0	1/1:6,7:11:29.05:345,29,0	1/1:11,3:14:16.64:269,17,0	1/1:9,2:10:25.19:220,25,0	1/1:8,8:13:33.10:442,33,0	1/1:8,0:7:17.50:144,18,0	1/1:3,7:8:21.07:323,21,0	1/1:5,5:10:26.55:315,27,0	1/1:12,2:12:23.57:299,24,0	1/1:15,5:17:27.83:256,28,0	1/1:7,1:7:14.45:137,14,0	1/1:7,3:6:14.60:147,15,0	1/1:2,4:8:14.54:178,15,0	1/1:3,2:5:11.81:113,12,0	1/1:1,5:9:18.06:262,18,0	1/1:5,1:12:11.45:124,11,0	1/1:8,0:4:8.54:51,9,0	1/1:5,8:12:29.81:373,30,0	1/1:18,4:18:43.15:298,43,0	1/1:7,11:18:50.11:607,50,0	1/1:8,3:9:17.66:170,18,0
chr10	89448925	.	AATCT	A	6181.16	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.362;DP=334;FS=3.526;HRun=0;HaplotypeScore=99.6497;InbreedingCoeff=0.6023;MQ=44.32;MQ0=8;MQRankSum=-0.004;QD=20.54;ReadPosRankSum=2.177;VQSLOD=4.3833;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:13:15.94:266,16,0	1/1:3,0:3:6.02:102,6,0	0/0:21,0:4:11.69:0,12,92	0/0:12,0:5:5.31:0,5,82	1/1:11,0:11:15.52:270,16,0	1/1:8,0:8:24.05:307,24,0	1/1:12,1:12:33.10:448,33,0	1/1:11,0:10:15.31:193,15,0	1/1:13,1:11:19.42:310,19,0	1/1:13,0:13:21.02:249,21,0	1/1:10,0:9:13.55:151,14,0	1/1:15,2:14:28.45:467,28,0	1/1:10,0:9:10.29:78,10,0	1/1:9,1:8:21.07:357,21,0	1/1:10,0:10:16.88:253,17,0	1/1:14,0:12:21.06:270,21,0	1/1:19,1:18:15.05:227,15,0	1/1:10,0:8:6.49:98,6,0	1/1:8,0:6:7.38:106,7,0	1/1:9,0:8:12.04:196,12,0	1/1:4,1:5:3.95:51,4,0	1/1:9,0:9:18.06:307,18,0	1/1:13,0:12:8.91:138,9,0	1/1:7,0:4:8.75:68,9,0	1/1:14,1:14:28.45:453,28,0	1/1:20,0:17:13.40:209,13,0	1/1:17,0:17:36.17:504,36,0	1/1:10,0:9:7.38:102,7,0
chr10	89448926	.	ATCT	A	6373.25	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.144;DP=219;FS=3.012;HRun=0;HaplotypeScore=73.0479;InbreedingCoeff=0.5859;MQ=51.55;MQ0=7;MQRankSum=-0.641;QD=34.08;ReadPosRankSum=3.697;VQSLOD=5.1882;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:15.05:254,15,0	1/1:0,2:2:6.02:102,6,0	0/0:20,0:4:11.60:0,12,128	0/0:12,0:5:8.22:0,8,90	1/1:5,5:10:15.52:266,16,0	1/1:0,5:8:24.07:298,24,0	1/1:1,7:12:33.09:435,33,0	1/1:0,3:4:12.04:199,12,0	1/1:2,6:6:18.06:307,18,0	1/1:0,8:9:20.56:324,21,0	1/1:0,3:3:9.03:154,9,0	1/1:2,9:11:27.56:453,28,0	1/1:0,6:6:9.03:130,9,0	1/1:2,5:7:21.07:373,21,0	1/1:0,5:5:15.05:258,15,0	1/1:1,7:8:21.07:327,21,0	1/1:1,9:10:15.05:251,15,0	1/1:4,1:4:6.02:91,6,0	1/1:1,3:2:6.02:96,6,0	1/1:3,1:7:12.04:197,12,0	1/1:1,1:2:3.01:49,3,0	1/1:4,5:9:18.06:307,18,0	1/1:7,4:10:8.91:149,9,0	1/1:1,4:3:9.03:117,9,0	1/1:4,6:10:27.09:452,27,0	1/1:0,5:4:12.04:211,12,0	1/1:0,7:11:33.09:477,33,0	1/1:0,3:3:6.02:96,6,0
chr10	89449286	.	G	GAT	9661.51	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=7.326;DP=439;FS=0.000;HRun=0;HaplotypeScore=80.6232;InbreedingCoeff=0.9856;MQ=73.56;MQ0=1;MQRankSum=-8.849;QD=43.92;ReadPosRankSum=-0.225;VQSLOD=5.9477;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,1737	1/1:3,3:6:18.06:330,18,0	0/0:28,0:17:41.41:0,41,473	0/0:21,0:16:42.13:0,42,583	1/1:3,15:17:45.15:858,45,0	1/1:1,6:7:15.05:288,15,0	1/1:2,9:11:15.05:286,15,0	1/1:9,22:28:78.25:1317,78,0	1/1:4,11:15:45.14:826,45,0	0/0:24,0:24:63.20:0,63,910	0/0:13,0:13:33.56:0,34,468	1/1:4,11:15:42.13:776,42,0	0/0:7,0:7:21.07:0,21,321	1/1:0,8:8:21.07:404,21,0	1/1:5,4:9:15.05:288,15,0	0/0:10,0:10:30.10:0,30,459	1/1:4,15:19:36.07:652,36,0	1/1:4,8:12:33.07:598,33,0	1/1:8,1:9:27.06:459,27,0	1/1:6,0:6:12.03:155,12,0	1/1:6,5:11:24.08:453,24,0	1/1:5,5:11:33.11:624,33,0	0/0:12,0:12:26.75:0,27,356	0/0:17,0:17:51.17:0,51,780	1/1:6,13:18:45.15:865,45,0	0/0:17,0:17:51.17:0,51,780	1/1:6,6:11:30.08:484,30,0	0/0:29,0:29:84.26:0,84,1253
chr10	89449287	.	AGT	A	1496.11	PASS	AB=0.906;AC=21;AF=0.375;AN=56;BaseQRankSum=10.584;DP=429;FS=0.938;HRun=0;HaplotypeScore=102.6037;InbreedingCoeff=0.1668;MQ=74.06;MQ0=1;MQRankSum=-7.944;QD=7.56;ReadPosRankSum=0.809;VQSLOD=3.1865;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,2332	0/1:5,1:6:7.45:83,0,7	0/0:30,0:18:41.54:0,42,663	0/0:22,0:16:45.04:0,45,685	0/1:17,1:18:31.99:44,0,32	0/1:5,0:5:22.90:23,0,25	0/1:9,0:9:21.93:22,0,69	1/1:23,7:26:36.45:567,36,0	0/1:12,3:15:21.04:50,0,21	0/0:23,0:23:66.21:0,66,1217	0/0:13,0:13:36.08:0,36,679	0/1:12,2:14:21.58:22,0,95	0/0:8,0:8:24.07:0,24,439	0/0:8,0:8:3.04:0,3,48	0/1:8,1:9:34.72:35,0,49	0/0:10,0:10:30.10:0,30,600	0/1:17,0:17:5.61:6,0,122	0/1:11,1:12:15.12:15,0,40	1/1:1,7:8:19.39:177,19,0	1/1:1,4:5:11.40:152,11,0	0/1:9,2:11:25.80:26,0,49	0/1:8,3:11:11.84:54,0,12	0/0:12,0:12:27.08:0,27,484	0/0:18,0:18:54.16:0,54,1057	1/1:14,3:16:13.29:82,13,0	0/0:17,0:17:51.17:0,51,1015	1/1:6,5:10:29.26:326,29,0	0/0:29,0:29:84.23:0,84,1639
chr10	89449300	.	C	CT	538.71	PASS	AB=0.972;AC=8;AF=0.143;AN=56;BaseQRankSum=1.881;DP=440;FS=2.768;HRun=3;HaplotypeScore=105.6763;InbreedingCoeff=0.6134;MQ=62.37;MQ0=3;MQRankSum=-2.175;QD=8.04;ReadPosRankSum=-1.971;VQSLOD=0.2867;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,105,1258	1/1:3,6:9:12.65:138,13,0	0/0:32,0:15:42:0,42,445	0/0:22,1:14:24.36:0,24,282	0/0:17,0:17:48.12:0,48,519	0/1:11,0:11:10.40:10,0,47	0/0:9,0:9:9.39:0,9,65	0/0:25,1:21:24.85:0,25,156	0/0:14,0:14:36.09:0,36,392	0/0:18,0:18:51.16:0,51,611	0/0:16,0:16:42.11:0,42,482	0/0:15,0:15:39.11:0,39,442	0/0:8,0:8:24.06:0,24,275	0/0:8,0:8:21.06:0,21,236	1/1:7,7:13:24:249,24,0	0/0:11,0:11:30.09:0,30,360	1/1:6,9:15:6.61:245,7,0	0/0:13,0:13:30.08:0,30,340	0/0:10,0:8:2.14:0,2,76	0/0:8,0:7:16.26:0,16,98	0/0:12,0:11:21.03:0,21,224	0/0:10,0:10:24.06:0,24,267	0/0:9,0:9:15.04:0,15,177	0/0:17,0:17:48.12:0,48,561	0/0:19,0:18:39.04:0,39,410	0/0:19,0:19:57.17:0,57,683	0/1:16,1:16:39.26:39,0,58	0/0:19,0:19:57.17:0,57,675
chr10	89449304	.	CTT	C	1966.60	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=5.937;DP=438;FS=9.729;HRun=10;HaplotypeScore=99.2388;InbreedingCoeff=0.8392;MQ=60.29;MQ0=5;MQRankSum=-6.269;QD=17.10;ReadPosRankSum=3.381;VQSLOD=1.6679;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1708	0/0:11,0:10:18.12:0,18,150	0/0:31,0:14:7.31:0,7,290	0/0:23,0:12:11.03:0,11,198	1/1:5,12:17:33.06:359,33,0	0/0:11,0:11:4.10:0,4,172	0/1:9,0:9:6.48:6,0,217	0/0:26,0:21:10.59:0,11,157	1/1:2,13:15:33.08:368,33,0	0/0:17,0:17:48.16:0,48,734	0/0:17,0:16:46:0,46,675	1/1:5,9:14:27.06:301,27,0	0/0:9,0:9:24.07:0,24,352	1/1:5,3:8:12.01:125,12,0	0/0:13,0:12:31.28:0,31,281	0/0:11,0:11:33.11:0,33,515	0/0:15,0:15:38.86:0,39,370	1/1:4,10:13:27.02:278,27,0	0/0:11,0:9:3.71:0,4,148	0/0:9,0:8:16.97:0,17,136	1/1:4,7:10:12.01:132,12,0	1/1:4,6:10:18.05:200,18,0	0/0:5,0:7:12.04:0,12,190	0/0:17,0:17:33.10:0,33,502	1/1:4,13:16:36.09:399,36,0	0/0:21,0:21:51.16:0,51,760	0/0:16,0:15:30.71:0,31,189	0/0:19,0:19:42.14:0,42,659
chr10	89449810	.	GA	G	12420.09	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=11.050;DP=668;FS=9.938;HRun=2;HaplotypeScore=138.0632;InbreedingCoeff=0.9954;MQ=65.49;MQ0=0;MQRankSum=-5.413;QD=32.86;ReadPosRankSum=1.774;VQSLOD=3.2154;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,43:44:99:1453,114,0	1/1:0,12:12:33.11:426,33,0	0/0:16,0:15:40.11:0,40,535	0/0:26,0:26:67.12:0,67,940	1/1:3,13:16:29.89:387,30,0	0/0:26,0:26:72.19:0,72,1003	0/0:32,0:32:90.14:0,90,1237	1/1:2,25:27:72.16:879,72,0	1/1:1,23:24:69.17:870,69,0	0/0:26,0:25:72.24:0,72,1050	0/0:14,0:14:39:0,39,496	1/1:0,24:24:69.22:891,69,0	0/0:26,0:26:72.13:0,72,997	1/1:1,25:26:69.22:891,69,0	1/1:4,31:35:93.23:1154,93,0	0/0:29,0:29:84.16:0,84,1169	1/1:2,27:29:81.19:1011,81,0	1/1:0,23:23:66.20:853,66,0	1/1:1,11:10:30.09:376,30,0	1/1:0,18:18:48.16:621,48,0	1/1:0,34:33:78.25:1008,78,0	1/1:1,24:23:54.04:656,54,0	0/0:10,0:10:30.02:0,30,390	0/0:34,0:34:96.31:0,96,1382	1/1:1,13:14:39.06:484,39,0	0/0:46,0:46:99:0,135,1816	1/1:1,14:15:38.90:460,39,0	0/0:5,0:5:12:0,12,135
chr10	89449843	.	AGACG	A	1006.78	PASS	AB=0.842;AC=21;AF=0.375;AN=56;BaseQRankSum=4.061;DP=761;FS=18.367;HRun=0;HaplotypeScore=227.7710;InbreedingCoeff=0.7897;MQ=54.99;MQ0=24;MQRankSum=-1.965;QD=4.86;ReadPosRankSum=-2.741;VQSLOD=1.0304;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:74.35:0,74,1192	0/0:10,0:10:21.46:0,21,209	0/0:59,0:23:39.57:0,40,590	0/0:50,0:28:43.23:0,43,622	1/1:10,0:10:3.47:26,3,0	0/0:26,0:25:48.46:0,48,527	0/0:32,0:28:62.40:0,62,763	1/1:24,0:20:44.27:418,44,0	1/1:21,0:21:10.66:72,11,0	0/0:30,0:28:57.88:0,58,1163	0/0:12,0:12:11.74:0,12,159	1/1:18,0:18:17.91:148,18,0	0/0:32,0:31:80.33:0,80,1335	1/1:27,0:27:6.48:60,6,0	0/0:43,0:41:77.41:0,77,1143	0/0:37,0:37:79.46:0,79,1454	0/0:41,0:37:58.68:0,59,867	0/0:33,0:33:48.21:0,48,946	1/1:12,0:8:11.16:59,11,0	1/1:19,1:20:3.43:27,3,0	1/1:28,0:27:14.65:126,15,0	1/1:19,0:18:4.41:28,4,0	0/0:14,0:14:18.49:0,18,331	0/0:44,0:42:77.58:0,78,1322	1/1:12,0:12:3.44:21,3,0	0/0:40,0:37:95.65:0,96,1743	0/1:13,3:16:60.27:219,0,60	0/0:8,0:7:20.94:0,21,421
chr10	89449860	.	GAC	G	1827.88	PASS	AB=0.990;AC=24;AF=0.480;AN=50;BaseQRankSum=9.785;DP=743;FS=1.094;HRun=0;HaplotypeScore=189.6355;InbreedingCoeff=0.4829;MQ=43.74;MQ0=44;MQRankSum=0.434;QD=5.31;ReadPosRankSum=2.449;VQSLOD=2.9344;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,8:36:23.98:227,24,0	0/1:8,0:8:0:0,0,0	0/0:61,0:11:2.74:0,3,12	0/0:59,0:15:14.12:0,14,140	./.	1/1:21,7:26:23.79:246,24,0	1/1:28,5:24:23.97:256,24,0	0/0:20,0:11:0.68:0,1,32	1/1:16,0:16:2.78:13,3,0	0/0:30,0:28:44.61:0,45,700	0/1:8,0:8:30.16:30,0,42	1/1:17,0:16:5.91:27,6,0	0/0:31,0:30:24.65:0,25,793	1/1:23,0:23:2.80:13,3,0	1/1:28,13:38:38.33:315,38,0	0/0:34,0:34:60.20:0,60,909	1/1:35,4:34:25.93:378,26,0	1/1:27,3:30:34.12:454,34,0	0/0:8,0:4:2.98:0,3,21	0/1:23,0:23:0.13:0,0,0	./.	./.	0/1:14,1:15:17.07:17,0,195	0/0:53,0:50:18.74:0,19,716	0/1:9,0:9:0:0,0,0	0/0:36,0:33:17.48:0,17,842	0/1:15,0:15:16.46:16,0,43	0/0:11,0:10:1.56:0,2,257
chr10	89449871	.	ACACACACAC	A	1361.62	PASS	AB=0.996;AC=22;AF=0.407;AN=54;BaseQRankSum=7.234;DP=756;FS=8.372;HRun=0;HaplotypeScore=229.9858;InbreedingCoeff=0.1750;MQ=37.76;MQ0=53;MQRankSum=-6.426;QD=3.47;ReadPosRankSum=-4.430;VQSLOD=0.7424;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:35:5.63:0,6,174	0/1:12,0:12:0.04:0,0,89	0/0:52,0:9:9.92:0,10,177	0/0:54,0:10:18.02:0,18,286	0/1:14,0:13:0:0,0,0	0/1:31,0:29:4.08:4,0,454	0/0:34,0:24:22.03:0,22,441	1/1:18,0:7:10.50:133,10,0	1/1:12,2:13:6.02:92,6,0	0/1:33,0:30:91.81:92,0,1620	0/0:16,0:15:21.54:0,22,545	1/1:15,1:15:18.06:288,18,0	0/0:37,0:34:40.34:0,40,2391	1/1:20,2:21:6.02:109,6,0	0/1:47,0:44:13.89:14,0,277	0/0:31,0:30:62.52:0,63,2357	0/1:34,0:29:99:155,0,210	0/1:26,0:26:67.53:68,0,216	0/1:9,0:2:0:0,0,0	1/1:26,0:25:2.68:13,3,0	./.	0/1:17,1:17:0:0,0,0	0/0:16,0:16:24.08:0,24,784	0/0:53,0:48:69.66:0,70,2458	0/0:12,1:13:0.75:0,1,1	0/1:48,0:45:99:200,0,2243	0/1:13,0:13:31.28:279,0,31	0/1:11,0:10:69.71:70,0,686
chr10	89449873	.	ACACACAC	A	1402.45	PASS	AB=0.992;AC=23;AF=0.426;AN=54;BaseQRankSum=7.045;DP=769;FS=8.422;HRun=0;HaplotypeScore=221.0451;InbreedingCoeff=0.1791;MQ=37.48;MQ0=54;MQRankSum=-4.652;QD=3.30;ReadPosRankSum=-3.373;VQSLOD=1.0621;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:37:0.99:1,0,61	0/1:12,0:12:2.74:3,0,82	0/0:50,0:8:9.50:0,10,152	0/0:54,0:9:18.50:0,18,261	0/1:14,0:13:0:0,0,0	0/0:30,0:29:8.36:0,8,311	0/0:33,0:23:19.89:0,20,262	1/1:17,0:6:10.17:94,10,0	1/1:11,3:13:6.02:111,6,0	0/1:33,0:30:92.05:92,0,1424	0/0:17,0:16:24.55:0,25,468	1/1:17,2:18:17.79:284,18,0	0/0:37,0:34:39.93:0,40,1967	1/1:22,0:22:6.02:106,6,0	0/1:49,0:46:24.08:24,0,145	0/0:31,0:30:68.52:0,69,2079	0/1:33,0:28:20.06:182,0,20	0/1:26,0:26:18.37:97,0,18	1/1:10,0:3:3.01:38,3,0	0/1:27,0:26:0:1,0,0	./.	0/1:21,1:20:0:0,0,0	0/0:16,0:16:24.08:0,24,632	0/0:56,0:50:72.67:0,73,2090	0/1:13,1:14:0.17:0,0,1	0/1:48,0:45:99:242,0,1927	0/1:13,0:13:19.07:224,0,19	0/1:11,0:10:58.31:58,0,539
chr10	89449877	.	ACAC	A	1808.08	PASS	AB=0.975;AC=26;AF=0.481;AN=54;BaseQRankSum=9.911;DP=760;FS=8.820;HRun=0;HaplotypeScore=198.0526;InbreedingCoeff=0.3605;MQ=37.63;MQ0=51;MQRankSum=-3.777;QD=4.40;ReadPosRankSum=2.715;VQSLOD=1.8488;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:36:27.44:91,0,27	0/0:13,0:14:7.95:0,8,70	0/0:41,0:6:4.94:0,5,118	0/0:53,0:8:18.50:0,18,223	0/1:11,2:12:0:0,0,0	0/0:29,1:28:6.43:0,6,113	0/0:33,0:25:27.85:0,28,159	0/1:17,0:6:2.53:69,0,3	1/1:13,0:12:6.02:76,6,0	0/1:31,1:30:99:148,0,932	0/0:17,1:17:23.56:0,24,314	1/1:16,2:17:18.05:222,18,0	0/0:37,1:36:5.95:0,6,1194	1/1:22,0:21:6.02:71,6,0	0/1:50,0:47:94.87:107,0,95	0/0:28,1:28:71.55:0,72,1377	1/1:32,0:26:31.73:318,32,0	1/1:27,0:27:37.21:312,37,0	1/1:10,0:3:3.01:38,3,0	1/1:25,1:25:0.12:1,0,0	./.	0/1:24,0:22:0:0,0,0	0/0:16,1:17:26.55:0,27,422	0/0:55,0:49:74.63:0,75,1335	1/1:14,1:15:0.21:1,0,0	0/1:47,2:47:99:287,0,1294	1/1:13,0:13:21:197,21,0	0/1:11,0:10:38.61:39,0,328
chr10	89449878	.	CACCA	C	3061.81	PASS	AB=0.963;AC=21;AF=0.420;AN=50;BaseQRankSum=8.019;DP=756;FS=0.000;HRun=0;HaplotypeScore=198.1923;InbreedingCoeff=0.2344;MQ=37.73;MQ0=50;MQRankSum=-1.828;QD=8.55;ReadPosRankSum=2.176;VQSLOD=2.7519;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,7:36:11.29:436,11,0	0/1:12,2:14:30.46:30,0,40	0/0:39,0:5:11.63:0,12,143	0/0:54,0:8:17.27:0,17,189	./.	0/1:29,1:28:99:130,0,109	0/1:32,1:24:99:134,0,123	0/1:16,0:5:29.53:31,0,30	1/1:13,0:12:2.98:24,3,0	0/0:33,0:31:61.34:0,61,1168	0/0:18,0:17:26.82:0,27,378	1/1:18,0:17:4.69:48,5,0	0/0:38,0:36:9.82:0,10,1391	1/1:22,0:21:2.98:26,3,0	0/1:44,6:47:45.19:515,0,45	0/0:29,0:28:72.10:0,72,1603	1/1:25,7:26:25.80:783,26,0	1/1:15,11:26:40.37:985,40,0	0/0:10,0:3:2.98:0,3,21	0/1:25,1:25:0.10:0,0,0	./.	./.	0/0:17,0:17:11.77:0,12,402	0/0:57,0:51:41.52:0,42,1483	0/1:15,0:15:0:0,0,1	0/0:49,0:47:18:0,18,1405	0/1:13,0:13:58.46:58,0,79	0/1:11,0:10:21.51:22,0,359
chr10	89449879	.	AC	A	1219.35	PASS	AB=0.835;AC=27;AF=0.500;AN=54;BaseQRankSum=10.020;DP=739;FS=9.898;HRun=2;HaplotypeScore=184.3629;InbreedingCoeff=0.3306;MQ=39.22;MQ0=50;MQRankSum=-2.539;QD=2.83;ReadPosRankSum=2.408;VQSLOD=-0.6489;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:35,3:35:14.37:14,0,33	0/0:11,5:16:9.20:0,9,74	0/1:38,0:6:0.89:1,0,108	0/0:55,0:10:17.98:0,18,200	0/1:3,9:12:0:0,0,0	0/0:26,3:28:13.48:0,13,111	0/0:30,3:25:26.65:0,27,170	0/1:12,3:4:3.22:77,0,3	1/1:6,7:12:5.99:59,6,0	0/1:30,2:30:99:143,0,756	0/0:15,3:17:23.11:0,23,289	1/1:7,10:16:18.32:188,18,0	0/0:32,5:35:0.15:0,0,904	1/1:8,11:18:5.75:50,6,0	0/1:46,1:45:17.90:18,0,98	0/0:28,1:28:71.74:0,72,1006	1/1:23,5:23:20.52:170,21,0	1/1:24,2:26:24.03:113,24,0	1/1:7,2:2:3.01:38,3,0	1/1:5,19:23:0.21:1,0,0	./.	0/1:5,19:22:0:0,0,0	0/0:13,2:15:26.06:0,26,327	0/0:47,10:51:75.77:0,76,1001	1/1:4,11:15:0.26:1,0,0	0/1:35,13:46:99:246,0,1045	1/1:3,10:13:25.92:229,26,0	0/1:10,1:10:35.04:35,0,255
chr10	89449906	.	AGAGAGACG	A	742.61	PASS	AB=0.982;AC=13;AF=0.232;AN=56;BaseQRankSum=6.661;DP=1205;FS=0.530;HRun=0;HaplotypeScore=377.8623;InbreedingCoeff=-0.1460;MQ=41.57;MQ0=37;MQRankSum=-5.960;QD=1.44;ReadPosRankSum=-5.003;VQSLOD=0.7026;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:38:18.98:0,19,820	0/0:39,0:37:5.01:0,5,679	0/0:41,0:15:3.51:0,4,417	0/1:45,0:17:0.70:1,0,115	0/0:49,4:52:8.92:0,9,189	0/1:39,0:37:1.23:1,0,517	0/0:41,0:31:19.08:0,19,339	0/1:26,0:19:2.42:2,0,497	0/1:30,0:29:41.82:42,0,167	0/1:68,0:67:39.27:39,0,3382	0/0:30,0:28:33.98:0,34,1175	0/1:31,3:33:14.60:65,0,15	0/0:60,0:52:58.43:0,58,2437	0/1:39,0:38:66.64:82,0,67	0/0:77,0:75:44.78:0,45,1017	0/0:46,0:43:46.21:0,46,2060	0/0:38,0:34:28.33:0,28,961	0/0:29,0:29:61.45:0,61,1568	0/1:12,0:8:22.42:22,0,115	0/0:43,1:42:4.72:0,5,14	0/0:37,0:30:4.59:0,5,100	1/1:60,7:62:2.90:46,3,0	0/0:37,0:36:27.96:0,28,898	0/0:63,0:58:64.12:0,64,2267	0/1:60,3:61:29.63:30,0,207	0/1:65,0:61:99:170,0,3354	0/1:25,2:26:61.50:381,0,61	0/0:14,0:12:18.21:0,18,447
chr10	89449908	.	AGAGACG	A	1048.66	PASS	AB=0.994;AC=14;AF=0.250;AN=56;BaseQRankSum=6.819;DP=1220;FS=7.503;HRun=0;HaplotypeScore=362.8723;InbreedingCoeff=-0.1233;MQ=41.43;MQ0=38;MQRankSum=-6.058;QD=1.98;ReadPosRankSum=-5.567;VQSLOD=0.3766;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:40:12:0,12,551	0/1:40,0:38:3.87:4,0,508	0/0:44,0:16:8.59:0,9,381	0/0:44,0:16:4.24:0,4,101	0/1:55,0:54:34.10:34,0,78	0/0:40,0:37:6.32:0,6,428	0/0:42,0:32:18.31:0,18,296	0/1:26,0:20:32.99:33,0,269	0/1:30,0:29:49.24:97,0,49	0/1:68,1:68:99:220,0,2510	0/0:31,0:28:33.24:0,33,935	1/1:34,0:33:2.24:53,2,0	0/0:58,2:52:31.86:0,32,1974	0/1:42,0:41:31.60:132,0,32	0/0:78,0:76:44.27:0,44,715	0/0:42,3:42:0.22:0,0,1613	0/0:37,0:33:3.65:0,4,464	0/0:28,0:28:59.68:0,60,1017	0/1:10,0:7:32.80:33,0,71	0/0:45,0:43:7.40:0,7,34	0/0:37,0:30:2.73:0,3,46	1/1:67,1:63:3.01:46,3,0	0/0:35,2:36:19.02:0,19,744	0/0:62,2:59:40.43:0,40,1908	0/1:63,1:62:38.99:39,0,57	0/1:63,2:62:99:207,0,2531	0/1:27,0:26:12.46:297,0,12	0/0:15,0:13:12.92:0,13,396
chr10	89449910	.	AGACG	A	1687.08	PASS	AB=0.999;AC=26;AF=0.464;AN=56;BaseQRankSum=7.166;DP=1218;FS=12.446;HRun=0;HaplotypeScore=337.6065;InbreedingCoeff=0.0678;MQ=41.27;MQ0=41;MQRankSum=-4.108;QD=1.93;ReadPosRankSum=-4.379;VQSLOD=0.4441;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:39:16.80:0,17,414	0/0:40,0:38:6.70:0,7,284	0/1:46,0:16:0.85:1,0,194	0/1:44,0:16:3.73:4,0,59	1/1:49,7:55:6.48:74,6,0	0/0:38,0:35:3.15:0,3,220	0/0:43,0:32:14.63:0,15,91	0/1:25,0:19:29.91:30,0,272	1/1:29,2:30:17.35:227,17,0	0/1:67,0:68:99:359,0,1417	0/0:28,1:26:17.83:0,18,654	1/1:33,0:32:8.66:67,9,0	0/1:59,1:52:16.39:16,0,1074	1/1:38,3:41:1.83:127,2,0	0/1:78,0:76:0.24:0,0,452	0/1:43,0:40:65.35:65,0,957	0/1:38,0:34:59.36:59,0,395	0/0:25,1:26:59.27:0,59,824	0/1:10,0:7:38.07:38,0,63	0/0:48,0:46:2.96:0,3,16	0/1:37,0:30:14.84:40,0,15	1/1:59,9:63:3.01:46,3,0	0/1:36,0:36:16.51:17,0,439	0/0:62,0:57:16.30:0,16,1205	1/1:62,3:63:15.28:143,15,0	0/1:65,0:62:99:249,0,1566	1/1:28,0:27:10.07:296,10,0	0/0:16,0:14:10.72:0,11,277
chr10	89449911	.	GACGGAC	G	737.23	PASS	AB=0.951;AC=12;AF=0.214;AN=56;BaseQRankSum=6.146;DP=1211;FS=2.574;HRun=0;HaplotypeScore=357.1715;InbreedingCoeff=-0.1353;MQ=41.23;MQ0=41;MQRankSum=-5.393;QD=1.43;ReadPosRankSum=-3.150;VQSLOD=1.3238;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:39:23.37:0,23,736	0/1:40,0:38:20.98:21,0,567	0/0:46,0:16:4.79:0,5,439	0/0:45,0:16:3.84:0,4,130	0/1:50,6:55:10.14:10,0,72	0/0:38,0:35:21.53:0,22,483	0/0:43,0:32:18.87:0,19,259	0/1:25,0:19:11.49:11,0,484	0/1:28,3:30:99:105,0,185	0/1:68,0:67:46.37:46,0,3078	0/0:29,0:26:30.57:0,31,957	0/1:29,4:32:6.29:75,0,6	0/0:59,0:51:57.54:0,58,2049	0/1:37,5:41:37.22:127,0,37	0/0:78,0:76:59.12:0,59,996	0/0:43,0:40:41.77:0,42,1750	0/0:38,0:35:3.41:0,3,767	0/0:26,0:26:63.13:0,63,1419	0/0:10,0:7:11:0,11,140	0/0:49,0:47:5.64:0,6,50	0/0:36,1:30:5.12:0,5,82	1/1:62,6:63:2.98:22,3,0	0/0:36,0:35:26.76:0,27,725	0/0:60,1:56:64.20:0,64,1918	0/1:58,6:62:41.87:42,0,120	0/1:61,0:58:81.43:81,0,2946	0/1:28,0:27:99:341,0,133	0/0:15,0:13:21.10:0,21,473
chr10	89449912	.	ACG	A	1197.73	PASS	AB=0.910;AC=23;AF=0.411;AN=56;BaseQRankSum=7.486;DP=1201;FS=10.744;HRun=0;HaplotypeScore=318.7150;InbreedingCoeff=-0.1549;MQ=41.23;MQ0=40;MQRankSum=-4.569;QD=1.39;ReadPosRankSum=-3.799;VQSLOD=0.6321;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,8:37:17.01:0,17,363	0/1:33,7:38:55.85:56,0,175	0/0:46,0:16:6.68:0,7,256	0/1:45,0:16:5.46:5,0,81	0/1:44,11:55:0.58:45,0,1	0/1:37,1:35:6.03:6,0,254	0/0:43,0:32:20.35:0,20,265	0/1:22,2:19:34.48:34,0,136	0/1:26,5:30:13.81:114,0,14	0/1:60,6:65:99:206,0,1171	0/0:26,1:24:9.68:0,10,504	1/1:32,1:32:4.35:38,4,0	0/1:53,2:48:17.64:18,0,1014	1/1:35,5:41:2.56:100,3,0	0/1:59,20:77:35.22:35,0,439	0/1:44,0:40:22.66:23,0,948	0/1:32,6:35:99:164,0,404	0/0:26,0:26:59.71:0,60,756	0/1:9,1:7:36.54:38,0,37	0/0:38,1:47:4.89:0,5,29	0/1:37,0:30:15.09:15,0,17	1/1:57,11:63:3.01:46,3,0	0/0:36,1:36:17.97:0,18,465	0/0:60,0:55:38.65:0,39,1137	0/1:48,16:62:24.76:47,0,25	0/1:61,2:59:99:105,0,1285	1/1:20,2:27:27.13:267,27,0	0/0:14,0:12:10.70:0,11,239
chr10	89449959	.	GAC	G	1443.45	PASS	AB=0.938;AC=18;AF=0.321;AN=56;BaseQRankSum=6.311;DP=1528;FS=4.197;HRun=0;HaplotypeScore=335.9577;InbreedingCoeff=-0.4085;MQ=30.36;MQ0=133;MQRankSum=-5.887;QD=1.68;ReadPosRankSum=0.017;VQSLOD=1.6560;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:49,4:42:22.81:75,0,23	1/1:33,7:38:0.78:77,1,0	0/0:5,0:2:3.01:0,3,41	0/1:10,0:3:15.80:16,0,65	0/0:61,10:67:0.69:0,1,44	0/1:50,0:42:47.21:47,0,98	0/0:67,0:38:13.99:0,14,109	0/0:75,0:50:32.73:0,33,610	0/1:33,6:34:35.85:71,0,36	0/1:92,5:85:99:314,0,1014	0/0:53,2:50:26.86:0,27,320	0/0:34,6:35:10.89:0,11,55	0/1:54,5:49:99:161,0,504	0/1:42,8:47:53.73:68,0,54	0/1:71,20:87:37.67:38,0,76	0/1:51,1:45:25.22:25,0,485	0/1:48,5:41:99:146,0,201	0/1:29,2:27:75.11:75,0,143	0/1:26,1:20:56.44:56,0,177	0/0:61,0:58:8.33:0,8,88	0/0:76,2:66:2.77:0,3,36	0/0:73,13:82:5.81:0,6,45	0/0:52,1:43:11.85:0,12,183	0/0:79,0:59:22:0,22,444	0/1:67,8:70:5.48:43,0,5	0/1:69,4:58:99:230,0,706	0/1:40,0:36:99:121,0,171	0/1:17,0:15:34.11:34,0,121
chr10	89449977	.	CA	C	731.60	PASS	AB=0.890;AC=7;AF=0.130;AN=54;BaseQRankSum=0.865;DP=1272;FS=111.488;HRun=1;HaplotypeScore=267.9181;InbreedingCoeff=-0.1165;MQ=28.84;MQ0=155;MQRankSum=-3.758;QD=1.95;ReadPosRankSum=1.678;VQSLOD=0.0419;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:35:29.68:0,30,365	0/0:30,0:27:24.02:0,24,246	0/0:2,0:1:3.01:0,3,38	./.	0/0:59,0:54:14.93:0,15,159	0/0:38,0:28:24.03:0,24,268	0/0:66,0:33:12.79:0,13,156	0/0:51,0:40:99:0,102,1218	0/0:37,0:29:23.61:0,24,235	0/1:64,11:60:99:231,0,1222	0/0:42,2:39:5.76:0,6,70	0/0:34,0:27:11.30:0,11,71	0/1:40,5:36:99:192,0,421	0/0:33,0:29:11.21:0,11,105	0/0:79,0:76:27.18:0,27,336	0/1:28,15:36:99:223,0,249	0/0:52,0:40:57.30:0,57,633	0/0:32,0:26:57.18:0,57,701	0/0:21,0:15:32.76:0,33,368	0/0:52,0:49:6.86:0,7,61	0/0:77,0:62:0.21:0,0,1	0/0:69,0:62:6.01:0,6,69	0/0:29,8:26:6.02:0,6,77	0/1:70,7:57:16.55:17,0,239	0/1:63,1:59:7.03:7,0,134	0/1:45,8:41:99:176,0,721	0/0:34,0:31:57.06:0,57,654	0/1:17,1:13:6.57:7,0,340
chr10	89450785	.	AAG	A	806.57	PASS	AB=0.962;AC=9;AF=0.161;AN=56;BaseQRankSum=3.446;DP=496;FS=0.578;HRun=0;HaplotypeScore=81.1429;InbreedingCoeff=0.7944;MQ=65.47;MQ0=4;MQRankSum=-2.525;QD=8.67;ReadPosRankSum=-4.714;VQSLOD=2.2772;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:44.94:0,45,386	0/0:8,0:8:15.12:0,15,142	0/0:27,0:10:9.79:0,10,88	0/1:24,1:12:38.88:39,0,83	0/0:23,0:22:29.77:0,30,331	0/0:12,0:12:13.01:0,13,240	0/0:13,0:13:36.01:0,36,321	1/1:16,0:16:28.25:273,28,0	0/0:9,0:9:20.92:0,21,173	0/0:23,0:23:63.12:0,63,831	0/0:21,0:21:62.83:0,63,744	0/0:19,0:19:50.94:0,51,427	0/0:19,0:19:54.09:0,54,743	0/0:15,0:15:20.31:0,20,197	0/0:18,0:18:23.98:0,24,207	0/0:20,0:20:60.14:0,60,883	0/0:15,0:15:26.88:0,27,210	0/0:25,0:25:74.46:0,74,1035	1/1:10,1:11:4.62:104,5,0	1/1:23,3:25:29.10:409,29,0	0/0:7,0:7:11.96:0,12,95	0/0:10,0:10:19.24:0,19,179	0/0:22,0:22:59.71:0,60,769	0/0:14,0:13:42.05:0,42,563	0/0:28,0:28:67.61:0,68,561	0/0:20,0:20:58.94:0,59,752	1/1:14,1:13:16.55:138,17,0	0/0:9,0:9:26.99:0,27,272
chr10	89450787	.	G	GAA	4071.19	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=1.854;DP=505;FS=7.234;HRun=11;HaplotypeScore=76.6443;InbreedingCoeff=0.7812;MQ=65.23;MQ0=3;MQRankSum=0.373;QD=13.39;ReadPosRankSum=0.210;VQSLOD=1.8503;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:26:36.80:423,37,0	1/1:1,0:8:13.24:110,13,0	0/0:28,0:10:11.02:0,11,54	0/1:23,0:13:23.55:24,0,50	1/1:5,14:20:42.85:511,43,0	1/1:2,3:13:27.01:225,27,0	1/1:2,0:13:24.95:86,25,0	1/1:18,0:18:14.40:88,14,0	1/1:3,8:11:21.03:280,21,0	0/0:22,0:22:42:0,42,405	0/0:18,0:21:20.59:0,21,286	1/1:5,12:18:30.10:420,30,0	0/0:19,0:19:38.95:0,39,366	1/1:3,12:16:23.05:278,23,0	1/1:3,0:18:14.51:123,15,0	0/0:19,0:20:51.02:0,51,543	1/1:4,1:16:18.03:186,18,0	0/0:24,0:25:67.08:0,67,625	0/1:10,0:10:8.30:119,0,8	0/1:27,0:26:0.63:130,0,1	1/1:2,7:9:9.03:130,9,0	1/1:3,7:12:17.97:181,18,0	0/0:22,0:23:31.39:0,31,449	0/0:14,0:13:26.99:0,27,262	1/1:7,20:28:50.14:669,50,0	0/0:17,0:19:29.81:0,30,381	1/1:13,0:13:11.22:87,11,0	0/0:9,0:9:8.94:0,9,87
chr10	89450791	.	A	AAAAAAG	1929.26	PASS	AB=0.914;AC=15;AF=0.268;AN=56;BaseQRankSum=3.499;DP=504;FS=5.861;HRun=0;HaplotypeScore=120.1774;InbreedingCoeff=0.4835;MQ=65.13;MQ0=4;MQRankSum=-5.194;QD=10.21;ReadPosRankSum=-1.674;VQSLOD=1.9098;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:42.23:0,42,239	1/1:7,0:7:6.94:27,7,0	0/1:31,0:10:37.96:46,0,38	0/1:26,0:14:16.77:17,0,117	0/1:20,0:19:4.84:5,0,42	0/0:14,0:14:30.97:0,31,223	0/0:14,0:14:33:0,33,298	1/1:18,0:18:14.53:431,15,0	0/0:11,0:11:11.49:0,11,83	0/0:20,0:20:48.14:0,48,883	0/0:19,0:19:44.79:0,45,795	0/0:14,0:14:15.57:0,16,72	0/0:17,0:17:48.06:0,48,806	0/0:16,0:16:23.81:0,24,124	0/1:18,0:18:19.19:19,0,61	0/0:21,0:21:63.16:0,63,1170	1/1:14,0:14:6.29:55,6,0	0/0:24,0:24:69.21:0,69,1363	1/1:4,4:15:1.26:527,1,0	0/1:9,14:25:1.76:626,0,2	0/0:9,0:9:10.06:0,10,52	0/0:13,0:13:8.18:0,8,90	0/0:25,0:25:66.61:0,67,1106	0/0:16,0:15:39.03:0,39,669	0/0:27,0:27:43.29:0,43,186	0/0:19,0:19:51.07:0,51,911	1/1:2,8:13:11.96:343,12,0	0/0:9,0:9:12.03:0,12,206
chr10	89451176	.	G	GA	2845.85	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=13.077;DP=455;FS=2.833;HRun=9;HaplotypeScore=92.8253;InbreedingCoeff=0.9590;MQ=74.53;MQ0=0;MQRankSum=-3.940;QD=15.55;ReadPosRankSum=0.350;VQSLOD=3.8740;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,15:20:39.45:392,39,0	1/1:16,0:16:41.54:292,42,0	0/0:19,0:19:18.92:0,19,194	0/0:10,0:9:11.97:0,12,104	1/1:18,0:18:35.60:249,36,0	1/1:18,0:18:47.46:334,47,0	1/1:8,0:8:23.48:140,23,0	0/0:32,1:33:38.76:0,39,560	1/1:15,0:14:35.42:230,35,0	0/0:14,0:14:29.98:0,30,260	0/0:20,0:20:59.99:0,60,521	1/1:12,0:12:26.65:181,27,0	0/0:13,0:13:32.98:0,33,286	1/1:9,0:9:26.79:199,27,0	1/1:23,0:23:56.32:393,56,0	0/0:9,0:9:23.99:0,24,208	1/1:11,0:11:26.67:183,27,0	0/0:18,0:18:44.97:0,45,391	0/0:14,0:14:35.99:0,36,312	0/0:29,0:29:71.91:0,72,618	1/1:5,0:5:14.85:103,15,0	1/1:4,0:4:8.83:54,9,0	0/0:20,0:20:47.99:0,48,417	0/0:1,0:1:3:0,3,26	1/1:24,0:24:50.17:324,50,0	0/0:41,0:41:99:0,102,882	0/0:17,0:16:38.85:0,39,338	0/0:13,0:13:35.99:0,36,312
chr10	89451179	.	A	AG	6176	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=10.008;DP=457;FS=11.207;HRun=0;HaplotypeScore=84.2607;InbreedingCoeff=0.8924;MQ=73.51;MQ0=0;MQRankSum=-6.204;QD=33.20;ReadPosRankSum=0.690;VQSLOD=3.4473;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:31.81:53,0,32	1/1:0,16:16:48.02:633,48,0	0/0:21,0:19:40.55:0,41,503	0/0:9,0:8:20.95:0,21,232	1/1:2,15:17:42.02:539,42,0	1/1:0,17:17:51.10:688,51,0	1/1:1,8:9:27.05:363,27,0	0/0:34,0:34:96.60:0,97,1232	1/1:4,12:15:47.98:576,48,0	0/0:14,0:14:42.09:0,42,525	0/0:20,0:20:60.20:0,60,836	1/1:2,10:12:35.97:440,36,0	0/0:12,0:12:36.11:0,36,488	1/1:0,9:9:27.09:383,27,0	1/1:3,20:23:69.07:883,69,0	0/0:11,0:11:33.06:0,33,408	1/1:1,10:11:27.09:384,27,0	0/0:18,0:18:54.14:0,54,701	0/0:16,0:16:28.48:0,28,577	0/0:28,0:28:81.08:0,81,1064	1/1:0,5:5:15.05:207,15,0	1/1:0,4:4:9.03:129,9,0	0/0:19,0:19:57.16:0,57,746	0/0:1,0:1:3.01:0,3,42	1/1:5,20:25:74.92:898,75,0	0/0:39,0:39:99:0,117,1557	0/0:16,0:15:41.99:0,42,559	0/0:13,0:13:36.12:0,36,502
chr10	89451233	.	T	TAAG	18469.79	PASS	AB=0.944;AC=35;AF=0.625;AN=56;BaseQRankSum=-0.975;DP=484;FS=3.126;HRun=0;HaplotypeScore=81.7189;InbreedingCoeff=0.8585;MQ=79.82;MQ0=0;MQRankSum=-5.959;QD=55.80;ReadPosRankSum=0.455;VQSLOD=6.5443;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:63.22:1424,63,0	1/1:0,14:14:42.14:965,42,0	0/0:12,0:13:1.61:0,2,457	0/1:15,0:17:58.73:59,0,325	1/1:3,28:31:84.29:1927,84,0	1/1:2,13:16:42.14:962,42,0	1/1:3,5:8:21.07:482,21,0	1/1:3,33:39:99:2171,108,0	1/1:0,16:16:45.15:1035,45,0	0/0:15,0:15:45.15:0,45,764	0/0:13,0:13:39.12:0,39,629	1/1:3,12:15:36.11:757,36,0	0/0:19,0:19:57.18:0,57,944	1/1:0,13:13:39.13:896,39,0	1/1:1,22:24:69.24:1572,69,0	0/0:20,0:20:57.20:0,57,969	1/1:3,9:13:21.07:483,21,0	0/0:17,0:17:51.17:0,51,862	1/1:2,8:12:33.04:579,33,0	1/1:3,20:23:57.14:1243,57,0	1/1:0,11:11:27.09:607,27,0	1/1:0,7:7:21.07:481,21,0	0/0:15,0:15:45.14:0,45,742	0/0:1,0:1:3.01:0,3,43	1/1:1,21:22:57.20:1310,57,0	0/0:36,0:36:99:0,105,1741	1/1:3,22:25:66.03:1518,66,0	0/0:4,0:4:11.97:0,12,144
chr10	89451649	.	AAAAC	A	6319.90	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.799;DP=621;FS=0.779;HRun=0;HaplotypeScore=105.0306;InbreedingCoeff=0.9949;MQ=70.16;MQ0=0;MQRankSum=-1.166;QD=33.62;ReadPosRankSum=4.364;VQSLOD=4.9891;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,105,2537	0/0:8,0:8:18.05:0,18,366	0/0:19,0:17:33.11:0,33,663	0/0:24,0:24:50.59:0,51,856	1/1:2,15:16:39.09:612,39,0	1/1:4,17:21:44.50:813,44,0	1/1:3,14:17:33.11:563,33,0	0/0:30,0:30:78.24:0,78,1772	1/1:5,12:17:27.09:460,27,0	0/0:35,0:35:99:0,105,2388	0/0:18,0:18:54.18:0,54,1281	1/1:4,25:29:60.21:1023,60,0	0/0:18,0:18:45.15:0,45,1088	1/1:4,12:16:15.62:494,16,0	0/0:11,0:11:33.10:0,33,773	0/0:23,0:23:63.22:0,63,1541	0/0:29,0:29:81.28:0,81,1958	0/0:20,0:20:57.05:0,57,1227	0/0:30,0:30:69.24:0,69,1704	0/0:30,0:30:81.28:0,81,1919	1/1:4,37:40:72.25:1226,72,0	1/1:3,11:14:30.06:479,30,0	0/0:16,0:16:42.14:0,42,955	0/0:24,0:24:66.20:0,66,1595	1/1:1,15:16:39.13:649,39,0	0/0:30,0:30:78.24:0,78,1879	0/0:19,0:19:54.18:0,54,1278	0/0:7,0:7:18.04:0,18,365
chr10	89451977	.	T	TAA	3991.20	PASS	AC=26;AF=0.481;AN=54;BaseQRankSum=-2.886;DP=479;FS=0.000;HRun=12;HaplotypeScore=67.2135;InbreedingCoeff=0.8956;MQ=58.07;MQ0=7;MQRankSum=-1.066;QD=17.74;ReadPosRankSum=-4.082;VQSLOD=1.6740;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:8,0:9:11.82:0,12,158	0/0:17,0:11:23.59:0,24,179	0/0:6,0:4:5.04:0,5,62	1/1:5,21:28:55.21:624,55,0	1/1:15,0:15:35.56:239,36,0	1/1:5,0:5:0.94:16,1,0	1/1:9,23:31:65.88:647,66,0	1/1:2,10:12:21.07:294,21,0	0/0:33,0:34:44.71:0,45,413	0/0:22,0:25:44.05:0,44,428	1/1:6,8:14:10.80:109,11,0	0/0:17,0:17:25.46:0,25,279	1/1:2,10:11:18.01:230,18,0	0/0:19,0:19:38.87:0,39,356	0/0:13,0:13:26.94:0,27,250	0/0:19,0:19:44.90:0,45,402	0/0:15,0:14:20.77:0,21,182	1/1:6,15:21:21.51:354,22,0	1/1:2,18:21:38.41:463,38,0	1/1:3,3:6:3.01:42,3,0	1/1:4,0:4:6.02:80,6,0	0/0:18,0:18:32.87:0,33,305	0/0:13,0:13:29.99:0,30,267	1/1:3,20:23:30.99:423,31,0	0/0:23,0:23:29.69:0,30,274	1/1:6,21:28:35.48:471,35,0	0/0:22,0:22:33.70:0,34,353
chr10	89452254	.	C	CAGA	6063.27	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=0.827;DP=605;FS=1.278;HRun=0;HaplotypeScore=88.5216;InbreedingCoeff=0.9961;MQ=73.57;MQ0=0;MQRankSum=-4.082;QD=50.11;ReadPosRankSum=1.245;VQSLOD=6.9096;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,0:6:15.05:255,15,0	0/0:17,0:16:48.16:0,48,828	0/0:21,0:21:42.95:0,43,953	0/0:21,0:21:60.21:0,60,1059	1/1:3,23:27:69.24:1631,69,0	1/1:5,25:30:87.30:1988,87,0	0/0:34,0:34:96.26:0,96,1584	0/0:18,0:18:54.18:0,54,947	0/0:32,0:32:93.32:0,93,1639	0/0:23,0:23:66.23:0,66,1153	0/0:33,0:33:99:0,99,1715	0/0:23,0:23:69.24:0,69,1215	0/0:17,0:16:48.16:0,48,843	1/1:4,0:27:63.21:1009,63,0	0/0:32,0:32:96.33:0,96,1673	1/1:1,0:31:72.25:1180,72,0	0/0:15,0:15:45.09:0,45,731	0/0:22,0:22:63.22:0,63,1108	0/0:20,0:20:60.19:0,60,1029	0/0:37,0:37:99:0,102,1741	0/0:16,0:16:48.16:0,48,847	0/0:11,0:11:30.07:0,30,458	0/0:16,0:16:48.14:0,48,817	0/0:21,0:21:57.20:0,57,1006	0/0:16,0:16:48.16:0,48,847	0/0:22,0:22:63.20:0,63,1081	0/0:17,0:17:51.17:0,51,900
chr10	89452516	.	TG	T	7153.33	PASS	AC=18;AF=0.333;AN=54;BaseQRankSum=11.482;DP=617;FS=1.030;HRun=2;HaplotypeScore=65.3577;InbreedingCoeff=0.9993;MQ=82.69;MQ0=0;MQRankSum=-1.315;QD=33.58;ReadPosRankSum=3.070;VQSLOD=5.0984;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:15,0:15:45.15:0,45,674	0/0:21,0:21:57.19:0,57,816	0/0:24,0:23:61.03:0,61,817	1/1:0,19:19:45.15:585,45,0	1/1:0,22:22:51.17:662,51,0	1/1:0,23:23:69.22:896,69,0	0/0:25,0:25:75.23:0,75,1087	1/1:1,19:20:60.18:766,60,0	0/0:20,0:20:60.20:0,60,899	0/0:18,0:18:54.17:0,54,790	1/1:1,22:23:48.16:623,48,0	0/0:21,0:21:60.20:0,60,896	1/1:1,24:25:63.20:818,63,0	0/0:20,0:20:54.18:0,54,809	0/0:29,1:30:45.37:0,45,1175	0/0:48,0:48:99:0,141,2073	0/0:23,0:23:69.23:0,69,1032	0/0:21,0:20:54.18:0,54,808	0/0:16,0:16:45.14:0,45,655	1/1:0,47:47:99:1675,129,0	1/1:0,24:24:60.20:779,60,0	0/0:9,0:9:24.08:0,24,360	0/0:41,0:41:99:0,123,1844	1/1:0,10:10:27.09:351,27,0	0/0:22,0:22:66.18:0,66,928	0/0:21,0:21:63.19:0,63,905	0/0:9,0:9:27.09:0,27,405
chr10	89452772	.	GTT	G	4104.66	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.005;DP=598;FS=0.883;HRun=3;HaplotypeScore=115.0268;InbreedingCoeff=0.9984;MQ=57.30;MQ0=2;MQRankSum=-7.183;QD=28.91;ReadPosRankSum=2.411;VQSLOD=3.0000;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.11:0,69,1216	0/0:12,0:12:33.08:0,33,594	0/0:24,0:16:48.09:0,48,847	0/0:23,1:19:34.70:0,35,753	1/1:3,23:19:41.81:637,42,0	0/0:17,0:17:41.89:0,42,728	0/0:11,0:11:30.10:0,30,562	0/0:32,0:31:90.23:0,90,1596	1/1:0,15:15:39.13:594,39,0	0/0:31,0:31:93.32:0,93,1755	0/0:17,0:17:48.16:0,48,896	1/1:1,29:22:57.19:869,57,0	0/0:21,0:21:60.20:0,60,1128	1/1:0,15:13:30.10:456,30,0	0/0:25,0:25:75.22:0,75,1411	0/0:29,0:29:87.26:0,87,1644	0/0:23,0:23:66.23:0,66,1262	0/0:35,0:35:90.31:0,90,1738	0/0:15,0:15:45.11:0,45,830	0/0:19,0:19:51.09:0,51,901	1/1:3,13:15:26.65:409,27,0	1/1:1,18:14:24.08:366,24,0	0/0:18,0:18:54.12:0,54,952	0/0:20,0:20:57.20:0,57,1101	1/1:0,21:21:51.17:774,51,0	0/0:27,0:27:81.26:0,81,1494	0/0:22,0:22:63.22:0,63,1214	0/0:7,0:7:21.04:0,21,339
chr10	89453076	.	T	TTC	3928.83	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=1.563;DP=437;FS=0.000;HRun=0;HaplotypeScore=58.2538;InbreedingCoeff=0.8608;MQ=56.41;MQ0=6;MQRankSum=-5.369;QD=40.50;ReadPosRankSum=-2.836;VQSLOD=4.5180;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:42.07:0,42,564	0/0:8,0:8:21.07:0,21,320	0/0:31,0:8:23.28:0,23,297	0/0:21,0:5:3.20:0,3,110	0/0:21,0:21:54.01:0,54,786	0/0:11,0:11:24.02:0,24,262	0/0:5,0:5:14.96:0,15,181	1/1:24,21:43:82.11:1749,82,0	0/0:10,0:10:30.10:0,30,459	0/0:29,0:29:84.26:0,84,1239	0/0:18,0:18:54.18:0,54,813	0/0:14,0:14:36.10:0,36,498	0/0:8,0:8:24.06:0,24,330	0/0:9,0:9:24.07:0,24,348	0/0:9,0:9:24.08:0,24,368	0/0:11,0:11:33.10:0,33,483	0/0:35,0:35:99:0,102,1519	0/0:11,0:11:30.02:0,30,406	1/1:4,20:21:57.18:1043,57,0	1/1:2,7:8:20.62:370,21,0	0/0:2,0:2:6.02:0,6,78	0/0:2,0:2:3.01:0,3,36	0/0:7,0:7:18.06:0,18,274	0/0:3,0:3:9.03:0,9,137	0/0:23,0:23:60.20:0,60,911	0/0:23,0:22:57.19:0,57,871	1/1:4,13:18:42.14:768,42,0	0/0:10,0:10:30.10:0,30,459
chr10	89453078	.	T	TC	351.29	PASS	AB=0.935;AC=5;AF=0.089;AN=56;BaseQRankSum=8.858;DP=436;FS=1.350;HRun=0;HaplotypeScore=63.2181;InbreedingCoeff=0.1428;MQ=56.13;MQ0=6;MQRankSum=-7.620;QD=3.62;ReadPosRankSum=0.057;VQSLOD=2.7273;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:44.73:0,45,501	0/0:8,0:8:24.05:0,24,314	0/0:29,0:8:23.28:0,23,269	0/0:22,0:5:8.99:0,9,88	0/0:21,0:21:63.08:0,63,799	0/0:10,0:10:23.78:0,24,208	0/0:5,0:5:12.50:0,12,136	0/1:37,6:42:99:263,0,142	0/0:10,0:10:30.10:0,30,419	0/0:29,0:29:81.24:0,81,1106	0/0:19,0:19:57.18:0,57,773	0/0:13,0:13:33.10:0,33,441	0/0:9,0:9:24.07:0,24,314	0/0:9,0:9:27.07:0,27,344	0/0:8,0:8:24.08:0,24,336	0/0:11,0:11:30.10:0,30,416	0/0:35,0:35:99:0,105,1415	0/0:11,0:11:33.02:0,33,404	0/1:22,2:21:55.66:56,0,124	0/1:11,0:10:11.16:11,0,29	0/0:2,0:2:6.01:0,6,71	0/0:2,0:2:3.01:0,3,39	0/0:8,0:8:18.06:0,18,248	0/0:3,0:3:9.03:0,9,125	0/0:22,0:22:63.15:0,63,854	0/0:23,0:22:57.19:0,57,796	1/1:15,2:17:1.86:130,2,0	0/0:10,0:10:30.10:0,30,420
chr10	89453080	.	C	CTT	2039.89	PASS	AB=0.815;AC=14;AF=0.259;AN=54;BaseQRankSum=8.389;DP=426;FS=14.621;HRun=12;HaplotypeScore=63.9328;InbreedingCoeff=0.8354;MQ=56.10;MQ0=6;MQRankSum=-7.082;QD=13.69;ReadPosRankSum=-3.732;VQSLOD=-0.1467;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:16:2.07:37,0,2	0/0:8,0:8:19.57:0,20,170	0/0:28,0:7:11.88:0,12,92	0/1:19,0:4:0:0,0,0	0/0:20,0:21:53.32:0,53,475	1/1:2,9:11:20.56:261,21,0	1/1:2,3:5:9.03:126,9,0	1/1:31,15:44:76.46:844,76,0	0/0:10,0:10:27.02:0,27,250	0/0:27,0:27:50.94:0,51,469	0/0:19,0:19:48.02:0,48,444	0/0:12,0:12:24.01:0,24,222	0/0:9,0:9:17.97:0,18,166	0/0:7,0:8:14.73:0,15,123	0/0:8,0:8:17.96:0,18,166	0/0:12,0:12:20.96:0,21,185	0/0:32,0:34:80.65:0,81,780	0/0:12,0:12:26.87:0,27,232	1/1:17,7:20:27.73:295,28,0	1/1:7,2:9:18.28:162,18,0	0/0:2,0:2:2.37:0,2,8	./.	0/0:6,0:6:17.94:0,18,155	0/0:3,0:3:6:0,6,56	0/0:22,0:23:56.20:0,56,507	0/0:22,0:22:47.74:0,48,428	1/1:5,9:16:28.57:495,29,0	0/0:10,0:10:30.03:0,30,277
chr10	89454287	.	AG	A	4674.12	PASS	AB=0.710;AC=12;AF=0.214;AN=56;BaseQRankSum=12.237;DP=647;FS=10.004;HRun=1;HaplotypeScore=73.0887;InbreedingCoeff=-0.2742;MQ=75.46;MQ0=0;MQRankSum=-9.510;QD=12.91;ReadPosRankSum=1.518;VQSLOD=2.7723;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.22:0,81,1221	0/0:10,0:10:30.10:0,30,480	0/0:20,0:19:41.03:0,41,596	0/0:20,0:20:13.24:0,13,702	0/0:27,0:27:81.28:0,81,1287	0/1:22,16:38:99:534,0,916	0/1:7,8:15:99:254,0,249	0/1:30,18:48:99:588,0,1229	0/1:14,16:30:99:508,0,497	0/0:11,0:11:33.11:0,33,508	0/0:12,0:12:33.11:0,33,528	0/1:15,8:23:99:149,0,620	0/1:23,8:31:99:203,0,987	0/1:15,9:24:99:304,0,623	0/0:14,0:13:39.13:0,39,624	0/1:24,6:30:99:140,0,1039	0/1:14,22:36:99:736,0,568	0/0:19,0:19:57.16:0,57,884	0/1:22,12:34:99:400,0,931	0/0:18,0:18:54.18:0,54,861	0/1:12,15:27:99:509,0,468	0/0:10,0:10:30.10:0,30,480	0/0:22,1:23:27.27:0,27,1008	0/1:14,12:26:99:347,0,588	0/0:12,0:12:32.90:0,33,502	0/0:26,0:26:78.27:0,78,1245	0/0:18,0:18:54.18:0,54,861	0/0:17,0:17:51.07:0,51,713
chr10	89454433	.	T	TG	2345.77	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=6.973;DP=577;FS=10.830;HRun=2;HaplotypeScore=90.6460;InbreedingCoeff=0.7531;MQ=67.01;MQ0=21;MQRankSum=-2.895;QD=8.89;ReadPosRankSum=0.071;VQSLOD=0.1037;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:2.13:0,2,104	1/1:6,0:6:8.93:70,9,0	0/0:65,0:23:33.41:0,33,265	0/0:55,0:19:0.49:0,0,150	1/1:34,0:34:52.73:393,53,0	0/1:14,0:14:13.87:22,0,14	1/1:13,0:13:9:84,9,0	1/1:25,0:22:22.83:266,23,0	1/1:12,0:12:8.50:68,8,0	0/0:16,0:16:43.24:0,43,453	0/0:26,0:25:63.08:0,63,671	1/1:8,0:8:12.33:124,12,0	0/0:21,0:21:45.19:0,45,476	1/1:14,1:15:8.92:70,9,0	0/1:14,0:12:3.75:86,0,4	0/0:23,0:23:59.91:0,60,641	1/1:13,0:13:8.43:52,8,0	0/0:12,0:12:21.75:0,22,304	1/1:22,0:20:47.64:404,48,0	1/1:17,0:16:13.86:172,14,0	1/1:13,1:13:7.98:93,8,0	1/1:13,1:14:32.77:288,33,0	0/0:21,0:21:24.05:0,24,512	0/0:7,0:7:21.06:0,21,243	1/1:20,0:20:24.05:266,24,0	0/0:29,0:28:76.17:0,76,765	1/1:20,2:22:10.92:100,11,0	0/0:18,0:18:49.95:0,50,504
chr10	89454435	.	G	GGTTTTTT	8247.50	PASS	AB=0.777;AC=32;AF=0.571;AN=56;BaseQRankSum=3.711;DP=626;FS=7.188;HRun=0;HaplotypeScore=141.9212;InbreedingCoeff=0.8279;MQ=64.03;MQ0=24;MQRankSum=-4.791;QD=22.85;ReadPosRankSum=-3.721;VQSLOD=3.1699;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:18:29.73:0,30,435	1/1:1,0:7:11.99:250,12,0	0/0:65,0:21:0.85:0,1,225	0/1:58,0:20:3.22:3,0,160	1/1:6,0:36:74.76:1156,75,0	0/1:4,0:16:10.17:148,0,10	1/1:2,9:14:11.27:230,11,0	1/1:23,0:20:55.56:791,56,0	1/1:2,0:15:12.04:249,12,0	0/0:15,0:18:44.78:0,45,849	0/0:22,0:24:65.90:0,66,1206	1/1:9,0:10:24.03:483,24,0	0/0:19,0:21:56.66:0,57,896	1/1:4,0:18:12.02:203,12,0	1/1:8,0:12:24.08:641,24,0	0/0:23,0:24:59.36:0,59,1044	1/1:4,9:19:14.94:289,15,0	0/0:12,0:12:29.99:0,30,632	1/1:26,0:24:58.37:988,58,0	1/1:21,0:19:47.79:608,48,0	1/1:8,0:14:17.09:269,17,0	1/1:4,0:17:36.12:796,36,0	0/0:18,0:22:56.72:0,57,983	0/0:7,0:7:21.06:0,21,485	1/1:5,0:23:30.10:674,30,0	0/0:31,0:31:70.09:0,70,1264	1/1:7,0:28:22:470,22,0	0/0:15,0:18:54.12:0,54,1092
chr10	89454896	.	G	GA	6213.85	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-13.177;DP=678;FS=5.598;HRun=6;HaplotypeScore=59.2803;InbreedingCoeff=0.9990;MQ=73.00;MQ0=0;MQRankSum=-0.793;QD=33.96;ReadPosRankSum=2.739;VQSLOD=5.0096;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:44.46:0,44,566	0/0:9,0:9:21.04:0,21,214	0/0:17,0:17:28.54:0,29,325	0/0:17,0:17:45.08:0,45,456	1/1:3,35:38:71.67:1197,72,0	0/0:34,0:34:96.20:0,96,972	0/0:17,0:17:51.12:0,51,520	0/0:33,0:33:90.16:0,90,899	1/1:2,24:26:72.23:906,72,0	0/0:40,0:40:99:0,111,1113	0/0:22,0:22:60.13:0,60,612	1/1:3,26:29:78.25:981,78,0	0/0:22,0:22:48.10:0,48,490	1/1:2,17:19:51.16:639,51,0	0/0:28,0:28:75.16:0,75,765	0/0:25,0:25:75.16:0,75,759	0/0:19,0:19:51.09:0,51,512	0/0:15,0:15:39.09:0,39,398	0/0:26,0:26:66.12:0,66,662	0/0:31,0:31:81.18:0,81,826	1/1:0,26:26:69.22:868,69,0	1/1:1,24:25:72.23:906,72,0	0/0:18,0:18:51.11:0,51,520	0/0:16,0:16:39.08:0,39,397	1/1:0,20:20:57.18:717,57,0	0/0:34,0:34:99:0,99,1010	0/0:40,0:40:99:0,117,1187	0/0:10,0:10:30.07:0,30,306
chr10	89461356	.	C	CA	496.36	PASS	AB=0.916;AC=25;AF=0.446;AN=56;BaseQRankSum=3.531;DP=483;FS=4.457;HRun=16;HaplotypeScore=83.8574;InbreedingCoeff=0.2923;MQ=49.47;MQ0=12;MQRankSum=-4.340;QD=1.87;ReadPosRankSum=-1.154;VQSLOD=-0.5342;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:7.26:0,7,85	0/1:6,2:9:10.81:11,0,42	0/1:8,0:8:9.07:9,0,24	0/1:6,0:5:9.90:11,0,10	1/1:20,0:21:11.56:54,12,0	0/0:1,0:11:18.29:0,18,51	0/0:4,0:13:10.60:0,11,30	0/0:21,2:23:13.14:0,13,72	1/1:15,0:14:12.29:60,12,0	0/1:16,0:16:9.05:9,0,52	0/1:11,1:15:3.24:3,0,63	1/1:18,0:17:5.03:29,5,0	0/1:15,2:17:30.05:35,0,30	1/1:11,0:9:5.17:22,5,0	0/1:13,5:16:21.44:36,0,21	0/1:16,2:19:0.86:1,0,115	1/1:16,8:25:3.30:126,3,0	0/0:23,0:21:24.98:0,25,137	0/0:21,0:21:20.78:0,21,120	0/1:12,1:18:6.96:7,0,86	1/1:9,0:9:7.09:37,7,0	1/1:8,0:10:14.53:77,15,0	0/0:8,0:10:16.24:0,16,89	0/0:18,1:20:11.31:0,11,132	1/1:24,0:24:30.94:150,31,0	0/0:25,0:24:7.80:0,8,142	0/0:20,0:19:30.98:0,31,171	0/0:16,1:17:1.42:0,1,98
chr10	89461550	.	A	AGG	2047.52	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=1.149;DP=562;FS=2.607;HRun=7;HaplotypeScore=76.7940;InbreedingCoeff=0.9945;MQ=76.84;MQ0=0;MQRankSum=1.110;QD=29.25;ReadPosRankSum=-4.765;VQSLOD=2.7282;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,105,1193	0/0:10,0:10:27.08:0,27,314	0/0:19,0:19:44.59:0,45,483	0/0:19,0:19:36.01:0,36,380	0/0:21,0:21:51.13:0,51,580	0/0:21,0:21:48.12:0,48,559	0/0:28,0:28:72.20:0,72,838	1/1:7,20:29:69.04:982,69,0	0/0:25,0:25:63.15:0,63,711	0/0:22,0:22:63.18:0,63,733	0/0:10,0:10:20.65:0,21,218	0/0:19,0:19:51.15:0,51,594	0/0:12,0:12:21.02:0,21,233	0/0:12,0:12:30.08:0,30,349	0/0:21,0:20:57.17:0,57,664	0/0:17,0:17:48.12:0,48,538	0/0:34,0:34:87.21:0,87,998	0/0:35,0:35:93.26:0,93,1076	1/1:6,7:13:24.07:370,24,0	1/1:1,13:15:32.60:480,33,0	0/0:21,0:21:51.12:0,51,582	0/0:8,0:8:21.06:0,21,244	0/0:12,0:12:27.06:0,27,304	0/0:24,0:24:63.18:0,63,734	0/0:19,0:19:54.13:0,54,609	0/0:25,0:25:66.19:0,66,768	1/1:5,8:12:24.08:375,24,0	0/0:18,0:18:48.09:0,48,538
chr10	89462393	.	T	TG	3026.85	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-10.732;DP=649;FS=0.919;HRun=4;HaplotypeScore=71.9707;InbreedingCoeff=0.9985;MQ=79.61;MQ0=0;MQRankSum=-0.098;QD=34.40;ReadPosRankSum=-4.567;VQSLOD=2.0605;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1350	0/0:9,0:9:24.07:0,24,272	0/0:20,0:20:50.11:0,50,519	0/0:12,0:11:27.06:0,27,296	0/0:24,0:24:72.21:0,72,817	0/0:20,0:20:60.17:0,60,678	0/0:25,0:25:72.19:0,72,807	1/1:1,30:31:90.26:1182,90,0	0/0:20,0:20:57.16:0,57,646	0/0:30,0:30:87.25:0,87,987	0/0:18,0:18:45.13:0,45,509	0/0:15,0:15:45.13:0,45,509	0/0:21,0:21:63.12:0,63,691	0/0:27,0:27:78.22:0,78,885	0/0:23,0:23:63.16:0,63,705	0/0:17,0:17:48.12:0,48,536	0/0:41,0:41:99:0,114,1282	0/0:19,0:19:54.11:0,54,598	1/1:2,11:13:33.11:448,33,0	1/1:1,16:17:42.14:574,42,0	0/0:37,0:37:99:0,99,1122	0/0:27,0:27:75.21:0,75,851	0/0:21,0:21:57.11:0,57,615	0/0:29,0:29:84.24:0,84,952	0/0:30,0:30:84.24:0,84,953	0/0:27,0:27:72.07:0,72,817	1/1:0,27:27:72.24:983,72,0	0/0:8,0:8:24.07:0,24,272
chr10	89463168	.	T	TCC	6854.80	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-3.021;DP=721;FS=3.527;HRun=7;HaplotypeScore=103.5646;InbreedingCoeff=0.9941;MQ=91.43;MQ0=0;MQRankSum=-3.345;QD=34.97;ReadPosRankSum=1.590;VQSLOD=4.4815;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,108,1258	0/0:14,0:14:36.10:0,36,419	0/0:33,0:33:72.13:0,72,796	0/0:29,0:29:60.60:0,61,667	1/1:1,16:19:47.61:717,48,0	0/0:22,0:22:60.17:0,60,699	0/0:31,0:31:78.22:0,78,907	0/0:27,0:27:63.14:0,63,717	1/1:2,24:26:69.24:1132,69,0	0/0:16,0:16:45.11:0,45,513	0/0:23,0:23:63.17:0,63,724	1/1:2,30:33:69.06:1092,69,0	0/0:14,0:14:36.11:0,36,418	1/1:5,23:28:58.44:938,58,0	0/0:21,0:21:63.15:0,63,718	0/0:51,0:51:99:0,150,1738	0/0:32,0:32:90.26:0,90,1048	0/0:27,0:27:74.43:0,74,846	0/0:16,0:16:27.05:0,27,315	0/0:19,0:19:48.13:0,48,559	1/1:5,41:48:99:1682,105,0	1/1:5,19:24:45.06:734,45,0	0/0:17,0:17:45.13:0,45,524	0/0:30,0:30:66.16:0,66,769	1/1:2,13:18:38.61:559,39,0	0/0:39,0:39:99:0,102,1169	0/0:19,0:19:57.12:0,57,641	0/0:4,0:4:12.04:0,12,140
chr10	89464281	.	TC	T	2326.96	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.756;DP=763;FS=0.459;HRun=3;HaplotypeScore=79.8219;InbreedingCoeff=0.9914;MQ=83.74;MQ0=0;MQRankSum=-2.407;QD=28.73;ReadPosRankSum=-2.545;VQSLOD=2.1487;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,1940	0/0:6,0:6:12.04:0,12,173	0/0:26,0:26:68.80:0,69,929	0/0:26,0:26:63.21:0,63,875	0/0:18,0:18:54.17:0,54,759	0/0:15,0:15:42.14:0,42,605	0/0:33,0:33:99:0,99,1426	1/1:2,26:28:78.21:914,78,0	0/0:23,0:23:69.23:0,69,994	0/0:21,0:21:60.20:0,60,860	0/0:15,0:15:45.15:0,45,648	0/0:41,0:41:99:0,123,1767	0/0:30,0:30:87.28:0,87,1234	0/0:28,0:28:84.27:0,84,1182	0/0:38,0:38:99:0,108,1556	0/0:35,0:35:99:0,105,1512	0/0:34,0:34:99:0,99,1426	0/0:19,0:19:57.19:0,57,821	1/1:3,11:14:33.06:379,33,0	1/1:1,18:19:44.74:626,45,0	0/0:65,0:65:99:0,190,2698	0/0:29,0:29:87.27:0,87,1216	0/0:17,0:17:51.16:0,51,712	0/0:45,0:45:99:0,135,1904	0/0:23,0:23:66.22:0,66,949	0/0:35,0:35:99:0,99,1418	1/1:0,20:20:48.14:568,48,0	0/0:14,0:14:39.13:0,39,562
chr10	89464915	.	G	GA	2335.76	PASS	AB=0.875;AC=13;AF=0.232;AN=56;BaseQRankSum=-4.950;DP=650;FS=1.317;HRun=11;HaplotypeScore=75.3974;InbreedingCoeff=0.6433;MQ=73.69;MQ0=0;MQRankSum=0.130;QD=12.56;ReadPosRankSum=-4.282;VQSLOD=2.6119;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,4:36:18.77:0,19,496	0/0:8,0:8:17.91:0,18,137	0/0:11,0:11:12.37:0,12,90	0/0:15,0:15:6.76:0,7,44	0/0:25,0:25:35.01:0,35,394	1/1:2,22:25:45.09:457,45,0	1/1:10,28:40:74.82:729,75,0	1/1:5,11:20:41.54:358,42,0	0/0:25,0:25:39.69:0,40,397	0/0:22,1:25:14.63:0,15,265	0/1:13,0:13:3.74:4,0,118	0/1:18,0:18:2.17:2,0,275	0/0:27,0:27:62.70:0,63,487	0/0:18,0:18:34.57:0,35,263	0/0:28,0:29:49.74:0,50,375	0/0:30,2:31:41.23:0,41,503	0/0:31,0:31:50.18:0,50,564	0/0:22,0:23:61.80:0,62,470	1/1:13,11:24:1.66:361,2,0	1/1:5,19:26:22.37:335,22,0	0/0:29,1:31:45.40:0,45,525	0/0:21,1:22:3.80:0,4,193	0/0:11,0:11:14.81:0,15,106	0/0:27,0:28:63.29:0,63,510	0/0:19,1:21:4.37:0,4,202	0/0:25,0:26:40.82:0,41,305	0/1:8,12:20:10.38:259,0,10	0/0:19,0:19:44.77:0,45,344
chr10	89465104	.	CT	C	1008.45	PASS	AB=0.842;AC=20;AF=0.357;AN=56;BaseQRankSum=4.343;DP=609;FS=5.355;HRun=15;HaplotypeScore=82.7914;InbreedingCoeff=0.3798;MQ=63.08;MQ0=2;MQRankSum=2.950;QD=3.23;ReadPosRankSum=3.418;VQSLOD=0.4347;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:30,3:36:16.27:16,0,275	0/0:11,0:14:12.08:0,12,94	0/0:13,0:7:2.88:0,3,15	0/0:6,0:6:8.85:0,9,61	0/1:8,8:20:13.22:151,0,13	0/1:18,2:21:17.11:17,0,134	0/0:20,0:22:18.38:0,18,265	0/0:16,0:26:27.38:0,27,151	1/1:7,12:19:40.38:256,40,0	0/1:19,1:22:10.38:10,0,143	0/0:14,2:19:9.06:0,9,230	1/1:8,10:20:24.69:146,25,0	0/0:27,0:28:31.32:0,31,364	1/1:10,14:25:39.28:242,39,0	0/0:14,1:27:23.45:0,23,253	0/1:17,3:24:5.13:5,0,276	0/0:12,0:26:30.71:0,31,181	0/0:22,1:28:10.45:0,10,319	0/0:19,0:22:36.75:0,37,236	0/0:16,0:26:28.54:0,29,175	1/1:7,9:16:13.28:82,13,0	1/1:9,10:22:29.49:159,29,0	0/1:12,2:15:12.01:12,0,154	0/1:23,3:27:1.26:1,0,375	1/1:7,4:14:11.97:67,12,0	0/1:23,4:28:31.22:31,0,244	0/0:6,0:21:20.97:0,21,108	0/0:17,0:17:26.98:0,27,234
chr10	89466456	.	TGG	T	4905.32	PASS	AB=0.945;AC=30;AF=0.536;AN=56;BaseQRankSum=8.801;DP=492;FS=3.040;HRun=11;HaplotypeScore=86.4563;InbreedingCoeff=0.8342;MQ=69.75;MQ0=2;MQRankSum=-2.115;QD=15.52;ReadPosRankSum=6.017;VQSLOD=3.4485;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:57.14:606,57,0	0/0:11,0:11:24.05:0,24,333	0/1:29,0:17:12.62:13,0,171	0/1:11,0:11:25.85:26,0,70	1/1:4,15:19:30.03:315,30,0	1/1:5,19:24:51.11:543,51,0	1/1:3,16:20:35.82:362,36,0	1/1:10,0:28:33.88:174,34,0	1/1:9,15:24:25.84:484,26,0	0/0:9,0:10:14.54:0,15,184	0/0:9,0:9:17.99:0,18,211	1/1:3,15:18:30.07:318,30,0	0/0:9,0:9:18.06:0,18,271	1/1:0,12:12:36.09:383,36,0	0/0:24,0:25:53.56:0,54,695	0/0:32,0:32:68.80:0,69,971	0/0:26,0:26:48.14:0,48,693	0/0:9,0:13:30.03:0,30,316	1/1:9,0:17:19.01:102,19,0	1/1:3,0:8:15.99:68,16,0	1/1:3,22:25:57.11:606,57,0	1/1:3,11:14:27.01:286,27,0	0/0:12,0:12:16.29:0,16,214	0/0:14,0:16:44.59:0,45,577	1/1:0,14:14:36.09:383,36,0	0/0:8,0:8:9.02:0,9,118	1/1:2,0:26:52.37:237,52,0	0/0:5,0:5:9.01:0,9,116
chr10	89467561	.	G	GAGGGGA	2172.37	PASS	AB=0.696;AC=7;AF=0.125;AN=56;BaseQRankSum=-4.200;DP=739;FS=12.467;HRun=0;HaplotypeScore=160.8014;InbreedingCoeff=0.7980;MQ=68.30;MQ0=2;MQRankSum=-1.850;QD=31.48;ReadPosRankSum=-5.287;VQSLOD=1.5740;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:96.23:0,96,1851	0/0:7,0:7:21.03:0,21,400	0/0:50,0:38:30.98:0,31,624	0/0:39,0:25:15.45:0,15,411	0/0:30,0:30:75.24:0,75,1535	0/0:21,0:21:48.10:0,48,946	0/0:34,0:34:74.77:0,75,1363	1/1:14,8:27:41.44:815,41,0	0/0:24,0:24:66.23:0,66,1352	0/0:23,0:23:42.14:0,42,871	0/0:14,0:14:36.11:0,36,736	0/0:40,0:40:87.24:0,87,1768	0/0:26,0:26:63.22:0,63,1277	0/0:21,0:21:51.09:0,51,987	0/0:40,0:40:90.23:0,90,1753	0/0:35,0:35:84.24:0,84,1679	0/0:26,0:26:57.19:0,57,1147	0/0:25,0:25:60.16:0,60,1227	0/1:9,4:15:16.48:382,0,16	1/1:3,13:20:33.07:917,33,0	0/0:34,0:34:78.14:0,78,1409	0/0:17,0:17:33.09:0,33,631	0/0:21,0:21:48.15:0,48,992	0/0:33,0:33:72.25:0,72,1484	0/0:25,0:25:58.08:0,58,1145	0/0:25,0:25:54.18:0,54,1113	1/1:2,2:6:6.02:200,6,0	0/0:18,0:18:48.16:0,48,1031
chr10	89469810	.	GTC	G	4536.53	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=6.435;DP=716;FS=1.221;HRun=0;HaplotypeScore=107.7277;InbreedingCoeff=0.9986;MQ=77.33;MQ0=3;MQRankSum=-1.284;QD=28.18;ReadPosRankSum=5.296;VQSLOD=6.3821;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,107,1801	0/0:9,0:9:21.04:0,21,324	0/0:47,0:32:61.34:0,61,817	0/0:55,0:39:42.99:0,43,706	1/1:2,27:30:56.86:744,57,0	0/0:33,0:33:86.97:0,87,1438	0/0:42,0:42:99:0,117,1932	0/0:30,0:30:69.59:0,70,1094	1/1:1,21:22:54.18:709,54,0	0/0:28,0:28:78.26:0,78,1308	0/0:9,0:9:26.76:0,27,420	1/1:1,23:24:54.17:698,54,0	0/0:20,0:20:45.14:0,45,732	1/1:1,18:19:45.15:591,45,0	0/0:30,0:30:78.27:0,78,1329	0/0:24,0:24:60.21:0,60,1015	0/0:24,0:24:63.20:0,63,1024	0/0:19,0:19:57.19:0,57,966	0/0:17,0:17:36.12:0,36,587	0/0:20,0:20:54.18:0,54,910	1/1:2,28:30:66.21:867,66,0	1/1:3,11:14:24.03:296,24,0	0/0:21,0:21:60.19:0,60,981	0/0:24,0:24:57.18:0,57,940	1/1:4,18:22:48.16:631,48,0	0/0:21,0:21:51.10:0,51,804	0/0:25,0:25:60.19:0,60,962	0/0:14,0:14:33.05:0,33,498
chr10	89470034	.	GA	G	2538.65	PASS	AB=0.741;AC=31;AF=0.620;AN=50;BaseQRankSum=2.324;DP=355;FS=1.892;HRun=8;HaplotypeScore=68.4263;InbreedingCoeff=0.8402;MQ=40.47;MQ0=29;MQRankSum=-4.035;QD=10.94;ReadPosRankSum=2.455;VQSLOD=2.4848;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,8:15:20.85:185,21,0	1/1:2,3:5:8.36:85,8,0	./.	./.	1/1:4,13:17:21.02:202,21,0	1/1:3,5:8:18.02:172,18,0	1/1:7,7:13:7.93:160,8,0	1/1:15,8:22:18.91:223,19,0	1/1:2,10:10:21.03:202,21,0	0/0:19,0:17:39.10:0,39,451	0/0:10,0:10:23.85:0,24,257	1/1:9,4:11:14.94:138,15,0	0/0:9,0:9:17.98:0,18,170	1/1:4,5:7:15.02:145,15,0	1/1:9,15:22:35.57:345,36,0	0/0:17,0:15:27.55:0,28,327	1/1:12,9:14:13.89:143,14,0	0/0:14,0:9:15.02:0,15,158	0/1:13,7:17:9.82:122,0,10	1/1:2,4:5:6.01:57,6,0	./.	1/1:7,6:14:23.06:208,23,0	0/0:18,0:17:27:0,27,289	0/0:10,0:8:21.03:0,21,228	1/1:3,11:13:23.98:218,24,0	0/0:11,0:11:23.92:0,24,252	1/1:6,8:11:6.28:132,6,0	0/0:5,0:3:9.02:0,9,100
chr10	89470042	.	AGAACC	A	1014.47	PASS	AB=0.945;AC=12;AF=0.214;AN=56;BaseQRankSum=0.831;DP=376;FS=19.360;HRun=0;HaplotypeScore=84.8342;InbreedingCoeff=-0.2008;MQ=42.65;MQ0=28;MQRankSum=-2.730;QD=6.30;ReadPosRankSum=-3.220;VQSLOD=-0.3121;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:17.71:0,18,457	0/1:5,0:5:58.95:78,0,59	0/1:6,0:3:0:0,0,0	0/1:10,0:3:7.19:22,0,7	0/0:19,0:19:33.63:0,34,262	0/0:14,0:15:17.83:0,18,277	0/0:11,0:10:23.07:0,23,286	0/1:17,11:26:99:425,0,314	0/0:10,0:9:14.44:0,14,146	0/0:20,0:18:51.12:0,51,1032	0/0:10,0:10:28.56:0,29,448	0/1:10,0:10:58.82:59,0,92	0/0:9,0:9:24.08:0,24,448	0/1:9,0:8:68.79:69,0,104	0/1:20,0:18:19.41:19,0,374	0/0:16,0:14:38.85:0,39,783	0/1:18,0:12:88.07:88,0,192	0/0:15,0:10:26.99:0,27,443	0/1:21,0:19:99:262,0,368	0/1:6,0:5:36.64:103,0,37	0/0:4,0:3:5.81:0,6,48	0/1:10,0:10:12.98:13,0,81	0/0:17,0:16:33.04:0,33,695	0/0:12,0:10:8.10:0,8,503	0/1:13,0:14:20.09:20,0,120	0/0:13,0:13:38.87:0,39,659	0/0:13,0:11:3.41:0,3,122	0/0:4,0:3:9.03:0,9,184
chr10	89470568	.	A	ACG	1006.55	PASS	AB=0.817;AC=8;AF=0.143;AN=56;BaseQRankSum=-7.378;DP=590;FS=2.537;HRun=0;HaplotypeScore=86.7320;InbreedingCoeff=0.7989;MQ=71.07;MQ0=2;MQRankSum=-0.335;QD=14.80;ReadPosRankSum=-3.974;VQSLOD=2.6577;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:66.14:0,66,768	0/0:8,0:8:24.08:0,24,300	0/0:9,0:9:5.59:0,6,26	0/1:14,0:14:1.12:4,0,1	0/0:17,0:17:30.09:0,30,375	0/0:18,0:18:42.13:0,42,524	0/0:34,0:34:90.25:0,90,1096	1/1:5,13:18:30.05:439,30,0	0/0:18,0:18:48.12:0,48,572	0/0:23,0:23:48.15:0,48,600	0/0:8,0:8:21.07:0,21,262	0/0:38,0:38:99:0,105,1311	0/0:17,0:17:45.13:0,45,548	0/0:23,0:23:51.13:0,51,611	0/0:23,0:23:60.13:0,60,696	0/0:20,0:20:57.14:0,57,671	0/0:27,0:27:69.10:0,69,788	0/0:33,0:33:81.16:0,81,952	0/1:8,11:19:1.66:360,0,2	1/1:2,4:6:9.03:148,9,0	0/0:59,0:59:99:0,135,1618	0/0:15,0:15:36.07:0,36,410	0/0:14,0:14:27.08:0,27,337	0/0:37,0:37:99:0,99,1187	0/0:20,0:20:39.11:0,39,475	0/0:21,0:22:60.01:0,60,715	1/1:1,9:9:11.81:197,12,0	0/0:6,0:6:18.06:0,18,223
chr10	89473439	.	TAGAA	T	4206.90	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.915;DP=587;FS=21.484;HRun=0;HaplotypeScore=105.6827;InbreedingCoeff=0.9817;MQ=72.52;MQ0=0;MQRankSum=-4.248;QD=42.49;ReadPosRankSum=-2.656;VQSLOD=1.9343;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:93.32:0,93,2368	0/0:5,0:5:9.03:0,9,235	0/0:22,0:17:40.93:0,41,884	0/0:29,0:27:59.13:0,59,1164	0/0:24,0:24:69.24:0,69,1690	0/0:26,0:26:75.26:0,75,1935	0/0:21,0:21:51.16:0,51,1199	1/1:5,28:31:78.23:1309,78,0	0/0:8,0:8:21.07:0,21,550	0/0:15,0:15:42.14:0,42,1032	0/0:25,0:25:75.24:0,75,1882	0/0:13,0:13:39.13:0,39,1014	0/0:21,0:21:63.20:0,63,1556	0/0:24,0:24:69.21:0,69,1738	0/0:20,0:20:57.18:0,57,1411	0/0:27,0:27:71.70:0,72,1671	0/0:20,0:20:57.20:0,57,1423	0/0:21,0:21:48.16:0,48,1229	1/1:1,18:19:57.20:1035,57,0	1/1:3,19:22:54.06:870,54,0	0/0:23,0:23:60.21:0,60,1498	0/0:9,0:9:21.07:0,21,512	0/0:14,0:14:42.13:0,42,1005	0/0:23,0:23:66.21:0,66,1666	0/0:14,0:14:39.12:0,39,961	0/0:26,0:26:72.25:0,72,1886	1/1:4,21:25:54.19:993,54,0	0/0:23,0:23:66.23:0,66,1670
chr10	89473847	.	G	GCTCT	4199.28	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-7.562;DP=675;FS=8.801;HRun=0;HaplotypeScore=110.7674;InbreedingCoeff=0.9965;MQ=70.17;MQ0=7;MQRankSum=-1.376;QD=38.53;ReadPosRankSum=-1.597;VQSLOD=3.3028;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:75.23:0,75,1181	0/0:12,0:12:30.09:0,30,475	0/0:47,0:23:29.39:0,29,389	0/0:60,0:29:27.86:0,28,332	0/0:26,0:26:48.16:0,48,796	0/0:24,0:25:57.19:0,57,917	0/0:16,0:16:30.10:0,30,494	1/1:19,10:31:43.38:853,43,0	0/0:18,0:18:42.14:0,42,692	0/0:16,0:17:45.14:0,45,702	0/0:15,0:15:36.10:0,36,529	0/0:25,0:25:54.16:0,54,848	0/0:23,0:23:55.16:0,55,984	0/0:23,0:23:53.96:0,54,845	0/0:28,0:28:72.25:0,72,1188	0/0:31,0:31:57.18:0,57,921	0/0:28,0:27:57.18:0,57,914	0/0:20,0:20:45.12:0,45,717	1/1:9,12:22:39.11:833,39,0	1/1:8,13:22:42.14:1023,42,0	0/0:18,0:18:30.09:0,30,472	0/0:13,0:13:36.12:0,36,593	0/0:11,0:11:28.34:0,28,447	0/0:18,0:18:39.13:0,39,647	0/0:20,0:20:36.08:0,36,520	0/0:30,0:30:60.19:0,60,946	1/1:8,24:34:65.92:1491,66,0	0/0:10,0:10:18.03:0,18,247
chr10	89474404	.	A	AAAGGAAGGAAGGAAGGAAGG	10419.07	PASS	AB=0.781;AC=24;AF=0.429;AN=56;BaseQRankSum=3.067;DP=633;FS=29.246;HRun=0;HaplotypeScore=276.7653;InbreedingCoeff=0.8380;MQ=58.58;MQ0=1;MQRankSum=-9.405;QD=36.82;ReadPosRankSum=-4.426;VQSLOD=2.1438;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:87.45:87,0,3179	0/1:2,0:9:3.95:4,0,166	0/0:30,0:18:14.94:0,15,304	0/0:27,0:15:18.02:0,18,403	1/1:24,1:24:53.99:2583,54,0	0/0:22,0:22:51.14:0,51,1906	0/0:19,0:19:36.11:0,36,1546	1/1:30,0:29:27.07:439,27,0	1/1:7,10:24:9.50:841,10,0	0/0:22,0:21:48.15:0,48,2065	0/0:35,0:35:81.25:0,81,3679	1/1:5,11:22:12.04:1096,12,0	0/0:18,0:18:45.13:0,45,1702	1/1:1,12:20:18.53:1681,19,0	0/0:8,0:32:42.14:0,42,828	0/0:32,0:32:72.73:0,73,2944	0/0:8,0:20:12.04:0,12,237	0/0:26,0:26:57.12:0,57,2096	1/1:6,0:19:38.80:458,39,0	1/1:3,0:17:35.91:416,36,0	1/1:20,0:20:26.85:977,27,0	1/1:12,0:12:23.94:994,24,0	0/0:13,0:13:36.11:0,36,1534	0/0:21,0:21:30.06:0,30,1345	1/1:7,10:25:6.02:559,6,0	0/0:20,0:20:51.15:0,51,2183	1/1:6,0:26:42.25:283,42,0	0/0:12,0:12:22.36:0,22,1285
chr10	89475878	.	T	TC	2628.77	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=0.613;DP=511;FS=0.924;HRun=1;HaplotypeScore=77.0246;InbreedingCoeff=0.9870;MQ=69.32;MQ0=14;MQRankSum=-0.999;QD=16.13;ReadPosRankSum=0.419;VQSLOD=3.6749;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:23.92:0,24,188	1/1:4,0:4:11.69:81,12,0	0/0:37,0:9:23.88:0,24,202	0/0:40,0:15:25.64:0,26,207	1/1:11,1:11:29.83:242,30,0	1/1:11,0:10:11.90:86,12,0	1/1:9,1:10:25.84:249,26,0	0/0:24,0:24:65.93:0,66,489	1/1:20,0:19:47.87:406,48,0	0/0:27,0:25:59.10:0,59,503	0/0:13,0:12:26.85:0,27,215	1/1:14,1:15:35.83:308,36,0	0/0:20,0:21:35.80:0,36,280	1/1:9,0:9:23.94:196,24,0	1/1:12,0:12:29.96:255,30,0	0/0:22,0:21:18.59:0,19,301	1/1:16,1:17:26.52:230,27,0	0/0:16,0:14:30.23:0,30,242	0/0:18,0:18:41.88:0,42,336	0/0:19,0:18:22.97:0,23,308	1/1:19,1:19:41.87:340,42,0	1/1:2,17:18:29.41:180,29,0	0/0:13,0:12:26.95:0,27,236	0/0:15,0:15:23.51:0,24,181	1/1:14,0:14:38:282,38,0	0/0:15,0:15:28.01:0,28,223	0/0:19,0:18:40.52:0,41,310	0/0:17,0:16:30.78:0,31,250
chr10	89475893	.	AAAAAAAAAAAG	A	826.99	PASS	AB=0.956;AC=11;AF=0.196;AN=56;BaseQRankSum=2.483;DP=663;FS=9.258;HRun=0;HaplotypeScore=158.5606;InbreedingCoeff=0.1175;MQ=49.86;MQ0=26;MQRankSum=2.037;QD=4.84;ReadPosRankSum=-5.553;VQSLOD=-0.2194;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:29.72:0,30,328	1/1:1,0:5:5.59:89,6,0	0/0:38,0:2:2.04:0,2,6	0/0:39,0:8:5.25:0,5,162	0/1:18,0:17:28.17:89,0,28	0/0:16,0:15:19.59:0,20,1239	0/1:19,0:19:54.20:54,0,830	0/0:39,0:39:43.74:0,44,1322	0/1:24,0:22:99:103,0,183	0/0:35,0:31:76.94:0,77,1307	0/0:20,0:17:39.06:0,39,958	0/1:21,0:21:43.92:52,0,44	0/0:22,0:22:56.90:0,57,1499	0/0:16,0:15:9.31:0,9,72	0/1:15,0:14:48.23:87,0,48	0/0:25,0:24:40.59:0,41,1494	0/1:30,0:30:56.67:57,0,83	0/0:24,0:22:56.26:0,56,1055	0/0:21,0:21:34.10:0,34,969	0/0:22,0:21:59.75:0,60,1381	0/0:26,0:24:2.90:0,3,17	1/1:19,0:17:9.80:176,10,0	0/0:19,0:13:32.40:0,32,640	0/0:19,0:18:30.58:0,31,851	0/1:11,9:20:36.57:269,0,37	0/0:22,0:22:57.21:0,57,1245	0/0:26,0:24:68.35:0,68,1495	0/0:16,0:15:33.11:0,33,534
chr10	89477170	.	TA	T	1370.11	PASS	AB=0.963;AC=11;AF=0.196;AN=56;BaseQRankSum=4.111;DP=446;FS=14.002;HRun=13;HaplotypeScore=49.6263;InbreedingCoeff=0.5678;MQ=59.63;MQ0=4;MQRankSum=-0.759;QD=9.51;ReadPosRankSum=-0.782;VQSLOD=0.8794;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:30.49:96,0,30	0/0:3,0:2:6.01:0,6,58	0/1:14,0:7:16.78:17,0,43	0/0:8,0:3:1.04:0,1,9	0/0:8,0:25:58.05:0,58,362	0/0:19,1:20:29.15:0,29,435	0/0:8,0:8:18.03:0,18,175	1/1:5,22:26:34.34:407,34,0	0/0:3,0:10:20.15:0,20,115	0/0:22,0:22:57.04:0,57,541	0/0:13,0:13:16.03:0,16,223	0/0:7,0:15:22.89:0,23,128	0/1:7,1:7:6.90:7,0,96	0/0:4,0:9:11.52:0,12,66	0/0:16,0:16:36:0,36,339	0/0:12,0:12:33.03:0,33,309	0/0:32,0:30:72.10:0,72,689	0/0:19,2:21:20.16:0,20,357	1/1:7,21:28:33.38:405,33,0	1/1:2,11:13:32.80:241,33,0	0/0:1,0:4:2.84:0,3,14	0/0:2,0:7:14.52:0,15,91	0/0:8,0:8:14.91:0,15,127	0/0:5,0:5:6.01:0,6,59	0/0:4,0:14:25.73:0,26,143	0/0:25,1:27:38.21:0,38,524	1/1:3,21:24:45.66:365,46,0	0/0:23,0:23:51.06:0,51,488
chr10	89477183	.	AG	A	372.88	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=3.599;DP=485;FS=1.712;HRun=1;HaplotypeScore=59.4835;InbreedingCoeff=0.3423;MQ=63.72;MQ0=3;MQRankSum=-0.048;QD=4.49;ReadPosRankSum=-1.158;VQSLOD=-0.0868;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,22:27:40.78:460,41,0	0/0:3,0:2:6.02:0,6,74	0/1:19,0:12:15:15,0,171	0/1:9,0:6:5.51:6,0,90	0/0:23,0:23:35.32:0,35,379	0/0:21,0:21:56.49:0,56,610	0/0:7,0:7:21:0,21,238	0/0:43,0:41:74.06:0,74,489	0/0:12,0:12:29.69:0,30,228	0/0:27,0:27:78.13:0,78,880	0/0:14,0:14:41.89:0,42,429	0/0:15,0:15:37.77:0,38,289	0/0:8,0:7:16.20:0,16,160	0/0:4,0:4:9.30:0,9,70	0/0:20,0:20:60.08:0,60,635	0/0:16,0:16:47.89:0,48,514	0/0:28,1:28:81.16:0,81,935	0/0:24,0:24:67.19:0,67,665	0/0:27,0:27:40.58:0,41,228	0/0:15,1:16:20.53:0,21,108	0/0:4,0:4:5.95:0,6,43	0/0:11,0:11:29.14:0,29,213	0/0:9,0:9:27:0,27,254	0/0:5,0:5:12:0,12,121	0/0:16,0:16:41.63:0,42,307	0/0:27,1:28:70.42:0,70,765	0/1:28,0:28:2.23:2,0,160	0/0:20,0:20:30.31:0,30,580
chr10	89478429	.	A	AT	2184.50	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-10.574;DP=788;FS=0.000;HRun=10;HaplotypeScore=80.5356;InbreedingCoeff=0.8467;MQ=73.20;MQ0=0;MQRankSum=-0.688;QD=19.50;ReadPosRankSum=1.473;VQSLOD=4.3280;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,957	1/1:2,10:12:30.08:320,30,0	0/0:17,0:17:32.70:0,33,266	0/1:21,0:21:8.65:9,0,120	0/0:30,2:32:42.95:0,43,559	0/0:32,0:32:80.90:0,81,665	0/0:27,0:27:65.90:0,66,541	0/0:39,0:39:95.80:0,96,774	0/0:19,0:19:50.93:0,51,419	0/0:27,0:28:76.92:0,77,618	0/0:27,0:27:74.90:0,75,616	0/0:34,0:34:89.79:0,90,726	0/0:27,1:28:39.93:0,40,534	0/0:27,0:27:74.87:0,75,610	1/1:7,35:42:68.52:921,69,0	0/0:28,0:29:73.94:0,74,597	1/1:0,35:36:98.45:1082,98,0	0/0:22,0:22:53.90:0,54,439	0/0:27,0:29:70.61:0,71,549	0/0:27,0:27:65.89:0,66,540	0/0:36,1:37:69.85:0,70,772	0/0:25,0:26:49.79:0,50,399	0/0:36,0:36:86.85:0,87,714	0/0:27,0:27:74.87:0,75,613	0/0:17,2:18:12.89:0,13,303	0/0:27,0:27:68.91:0,69,566	0/0:27,0:28:73.91:0,74,591	0/0:18,0:18:47.88:0,48,389
chr10	89479438	.	AAG	A	724.99	PASS	AB=0.903;AC=13;AF=0.241;AN=54;BaseQRankSum=6.720;DP=642;FS=0.000;HRun=0;HaplotypeScore=75.4898;InbreedingCoeff=-0.2030;MQ=30.20;MQ0=88;MQRankSum=-2.429;QD=2.64;ReadPosRankSum=3.258;VQSLOD=1.4941;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,6:22:99:207,0,440	0/0:9,0:6:12.04:0,12,216	1/1:4,1:1:3.01:35,3,0	./.	0/0:28,1:25:9.22:0,9,811	0/1:24,1:14:23.92:24,0,252	0/0:23,0:11:18.06:0,18,306	0/0:37,0:7:21.07:0,21,378	0/0:21,0:14:21.07:0,21,346	0/0:29,0:17:45.15:0,45,810	0/0:25,0:22:57.20:0,57,1016	0/1:21,2:15:59.87:60,0,282	0/1:27,4:20:92.81:93,0,374	0/1:18,2:11:68.90:69,0,147	0/0:36,0:28:38.87:0,39,680	0/0:34,0:22:21.07:0,21,347	0/1:27,7:27:99:123,0,548	0/1:15,4:12:89.99:150,0,90	0/0:16,0:1:3.01:0,3,54	0/1:14,1:11:14.89:15,0,404	0/0:20,0:12:15.05:0,15,269	0/1:12,1:10:17.89:18,0,329	0/0:15,0:7:15.05:0,15,254	0/1:23,2:13:65.89:66,0,198	0/0:18,0:14:33.11:0,33,593	0/0:30,1:20:18.18:0,18,972	0/1:33,1:25:15.15:15,0,400	0/0:11,0:8:3.01:0,3,54
chr10	89479713	.	GCAA	G	1003.67	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.780;DP=476;FS=2.913;HRun=0;HaplotypeScore=62.8265;InbreedingCoeff=0.9017;MQ=58.23;MQ0=10;MQRankSum=0.813;QD=28.68;ReadPosRankSum=1.298;VQSLOD=3.7204;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:84.25:0,84,1886	0/0:3,0:2:6.02:0,6,138	0/0:11,0:11:33.08:0,33,665	0/0:14,0:8:23.78:0,24,397	0/0:11,0:10:24.08:0,24,551	1/1:0,21:19:42.14:716,42,0	1/1:3,11:11:24.08:409,24,0	0/0:35,0:32:96.22:0,96,1877	0/0:19,0:19:51.16:0,51,1128	0/0:18,0:13:39.13:0,39,846	0/0:12,0:12:27.09:0,27,619	0/0:22,0:21:56.71:0,57,1198	0/0:12,0:12:36.12:0,36,829	0/0:13,0:10:12.04:0,12,276	0/0:21,0:20:54.10:0,54,1172	0/0:18,0:18:48.16:0,48,1071	0/0:16,0:15:39.13:0,39,899	0/0:17,0:14:39.13:0,39,893	0/0:23,0:23:66.20:0,66,1454	0/0:13,0:12:27.09:0,27,621	0/0:22,0:19:41.81:0,42,942	0/0:10,0:8:15:0,15,265	0/0:8,0:5:12.04:0,12,276	0/0:25,0:24:42.13:0,42,924	0/0:11,0:11:27.08:0,27,578	0/0:24,0:23:66.23:0,66,1522	0/0:21,0:21:60.21:0,60,1378	0/0:5,0:5:15.05:0,15,346
chr10	89480002	.	CT	C	217.99	PASS	AB=0.719;AC=2;AF=0.040;AN=50;BaseQRankSum=1.408;DP=258;FS=0.938;HRun=12;HaplotypeScore=31.4605;InbreedingCoeff=-0.0400;MQ=55.69;MQ0=3;MQRankSum=0.379;QD=5.74;ReadPosRankSum=2.310;VQSLOD=0.4495;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,24:30:10.25:290,0,10	./.	0/0:6,0:4:8.94:0,9,68	./.	0/0:7,0:7:12.02:0,12,122	0/0:11,0:11:18.04:0,18,183	0/0:7,0:7:12.01:0,12,115	0/0:32,1:29:30.86:0,31,488	0/0:3,0:3:3.01:0,3,30	0/0:5,0:4:12.02:0,12,122	0/0:7,0:6:8.95:0,9,79	0/0:1,0:1:3.01:0,3,30	0/0:4,0:4:5.97:0,6,50	0/0:6,0:6:12.02:0,12,122	0/0:5,0:7:11.64:0,12,77	0/0:5,0:5:12.02:0,12,122	0/0:12,0:25:31.41:0,31,173	0/0:18,0:19:44.76:0,45,424	0/0:12,1:14:6.66:0,7,235	0/1:6,1:7:8.25:8,0,96	0/0:7,0:7:9.02:0,9,91	0/0:0,0:1:2.84:0,3,14	0/0:3,0:3:5.93:0,6,47	./.	0/0:10,0:10:27.04:0,27,269	0/0:14,0:13:23.99:0,24,226	0/0:10,0:10:21.04:0,21,213	0/0:7,0:7:11.97:0,12,100
chr10	89481355	.	GA	G	4710.70	PASS	AB=0.909;AC=23;AF=0.411;AN=56;BaseQRankSum=10.836;DP=532;FS=14.542;HRun=10;HaplotypeScore=55.5182;InbreedingCoeff=0.8989;MQ=64.88;MQ0=1;MQRankSum=1.591;QD=21.22;ReadPosRankSum=3.181;VQSLOD=4.5393;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,32:38:89.95:781,90,0	1/1:0,7:7:21:182,21,0	0/1:9,1:6:17.13:17,0,40	0/0:14,0:10:2.62:0,3,66	1/1:1,23:24:59.93:514,60,0	0/0:13,0:13:33.09:0,33,365	0/0:13,0:13:36.06:0,36,385	0/0:31,0:31:81.59:0,82,867	1/1:2,8:10:26.95:227,27,0	0/0:19,1:20:25.08:0,25,505	0/0:18,2:20:25.07:0,25,497	1/1:1,17:18:50.99:443,51,0	0/0:17,0:17:45.11:0,45,488	1/1:0,16:16:41.99:365,42,0	1/1:2,17:19:47.99:417,48,0	0/0:18,0:18:48.13:0,48,531	1/1:6,34:40:99:905,105,0	0/0:29,0:30:75.02:0,75,773	0/0:20,0:20:48.11:0,48,513	0/0:24,0:24:69.19:0,69,763	1/1:1,7:8:17.99:156,18,0	1/1:1,11:12:29.99:260,30,0	0/0:17,2:19:25.09:0,25,498	0/0:17,0:17:39.11:0,39,432	1/1:2,18:20:50.99:443,51,0	0/0:22,0:22:63.16:0,63,691	0/0:20,1:22:33.94:0,34,583	0/0:9,0:9:24.04:0,24,248
chr10	89484529	.	C	CT	4416.66	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=4.824;DP=655;FS=2.447;HRun=12;HaplotypeScore=91.1594;InbreedingCoeff=0.8570;MQ=70.43;MQ0=2;MQRankSum=-0.100;QD=11.56;ReadPosRankSum=-1.730;VQSLOD=4.3549;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:17.79:0,18,409	1/1:0,6:6:15.02:145,15,0	0/0:32,0:23:10.98:0,11,74	0/1:24,0:16:16.80:17,0,73	1/1:28,0:28:12.86:194,13,0	1/1:3,22:25:51.08:496,51,0	1/1:2,22:24:54.09:526,54,0	1/1:12,0:23:37.31:208,37,0	1/1:19,0:19:45.46:241,45,0	0/0:27,1:28:36.41:0,36,428	0/0:27,0:27:62.61:0,63,457	1/1:22,0:22:44.86:229,45,0	0/0:12,0:12:29.81:0,30,219	0/1:14,0:14:6.09:95,0,6	1/1:7,23:30:35.17:500,35,0	0/0:21,0:21:50.69:0,51,372	1/1:5,26:31:42.63:562,43,0	0/0:19,0:19:50.39:0,50,357	1/1:5,1:18:32.04:183,32,0	1/1:4,2:25:49.23:294,49,0	1/1:13,1:13:28.50:155,28,0	1/1:21,0:21:29.50:190,30,0	0/0:18,0:20:51.68:0,52,355	0/0:24,0:24:56.41:0,56,406	1/1:22,0:22:39.41:201,39,0	0/0:28,0:28:68.54:0,69,503	1/1:13,1:32:32.53:181,33,0	0/0:30,0:30:67.95:0,68,485
chr10	89484541	.	T	TA	4167.69	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=0.764;DP=642;FS=15.105;HRun=2;HaplotypeScore=83.4277;InbreedingCoeff=0.5567;MQ=70.69;MQ0=1;MQRankSum=1.741;QD=15.10;ReadPosRankSum=4.613;VQSLOD=2.1493;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:83.28:0,83,932	0/1:7,0:7:4.90:5,0,36	0/0:31,0:23:34.28:0,34,284	0/1:23,0:16:9.55:10,0,135	1/1:2,23:26:73.49:800,73,0	0/1:24,0:24:19.25:32,0,19	0/1:27,0:27:23.89:24,0,65	0/0:26,0:26:63.67:0,64,454	1/1:6,15:21:59.73:691,60,0	0/0:24,0:24:59.19:0,59,701	0/0:22,0:22:63.08:0,63,730	1/1:1,20:21:48.16:617,48,0	0/0:18,0:18:51.05:0,51,532	1/1:2,11:13:23.18:342,23,0	0/1:26,0:26:39.65:40,0,45	0/0:23,0:23:69.14:0,69,775	0/1:29,0:29:36.24:36,0,42	0/0:23,0:23:60.09:0,60,668	0/0:15,0:15:38.88:0,39,239	0/0:21,0:21:22.50:0,22,134	1/1:2,12:13:29.92:350,30,0	1/1:1,21:22:54.08:655,54,0	0/0:23,0:23:65.84:0,66,692	0/0:25,0:25:72.12:0,72,809	1/1:2,20:23:45.13:566,45,0	0/0:29,0:29:87.21:0,87,1001	0/0:23,0:23:22.31:0,22,142	0/0:30,0:30:84.13:0,84,932
chr10	89484696	.	GCTCT	G	151.22	PASS	AB=1.000;AC=8;AF=0.154;AN=52;BaseQRankSum=1.069;DP=581;FS=21.868;HRun=0;HaplotypeScore=97.1588;InbreedingCoeff=0.4202;MQ=52.18;MQ0=21;MQRankSum=0.150;QD=1.74;ReadPosRankSum=3.237;VQSLOD=0.1244;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:2.29:9,2,0	0/0:12,0:12:12.50:0,13,156	0/0:50,0:14:0:0,0,0	./.	0/0:14,0:14:9.03:0,9,149	1/1:13,1:14:3.01:46,3,0	1/1:15,4:20:15.04:193,15,0	0/0:30,0:30:5.98:0,6,47	0/0:13,0:13:6.02:0,6,93	0/0:11,0:11:15.04:0,15,246	0/1:9,0:9:0:0,0,0	0/0:17,0:17:9.03:0,9,112	0/0:14,0:13:14.88:0,15,208	0/0:10,0:9:5.98:0,6,68	0/0:20,0:20:9.03:0,9,168	0/0:9,0:10:11.78:0,12,211	0/0:34,0:33:30.06:0,30,402	0/0:25,0:25:7.26:0,7,96	0/0:23,0:19:6.02:0,6,121	0/0:16,0:16:5.73:0,6,116	0/0:22,0:22:15.01:0,15,219	./.	0/0:10,0:10:6.02:0,6,136	0/0:25,0:25:21.19:0,21,418	0/0:8,0:8:6.02:0,6,106	0/0:18,0:16:9.03:0,9,175	0/1:21,0:21:18.92:19,0,109	0/0:26,0:26:3.48:0,3,56
chr10	89484892	.	A	ATGCG	1105.75	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-0.342;DP=333;FS=5.259;HRun=0;HaplotypeScore=80.7457;InbreedingCoeff=0.6636;MQ=58.26;MQ0=2;MQRankSum=-0.258;QD=15.57;ReadPosRankSum=-2.786;VQSLOD=2.0235;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:9:8.90:0,9,60	0/0:3,0:3:8.31:0,8,48	0/0:5,0:2:5.60:0,6,28	0/0:7,0:6:11.81:0,12,112	0/0:8,0:7:17.95:0,18,257	0/0:5,0:13:5.54:0,6,41	0/1:29,0:29:99:187,0,106	1/1:6,0:19:47.51:528,48,0	0/0:5,0:5:5.93:0,6,47	0/0:13,0:13:35.90:0,36,577	0/0:11,0:10:21.02:0,21,393	0/0:14,0:14:24.02:0,24,397	0/0:6,0:6:17.28:0,17,154	0/0:9,0:10:15.05:0,15,290	0/0:5,0:5:8.90:0,9,61	0/0:3,0:3:9:0,9,145	0/0:14,0:14:17.39:0,17,106	0/0:13,0:13:32.96:0,33,489	1/1:0,9:11:29.90:312,30,0	1/1:4,3:7:11.99:100,12,0	0/0:21,0:21:29.92:0,30,424	0/0:11,0:11:20.97:0,21,311	0/0:12,0:12:26.83:0,27,269	0/0:33,0:33:71.90:0,72,1138	0/0:13,0:13:23.91:0,24,331	0/0:13,0:12:32.88:0,33,427	1/1:0,4:5:6.01:133,6,0	0/0:17,0:16:3.86:0,4,347
chr10	89484908	.	GCACACA	G	426.94	PASS	AB=0.930;AC=10;AF=0.208;AN=48;BaseQRankSum=1.304;DP=306;FS=0.000;HRun=0;HaplotypeScore=77.5815;InbreedingCoeff=0.4066;MQ=52.79;MQ0=13;MQRankSum=2.741;QD=4.80;ReadPosRankSum=3.357;VQSLOD=0.9636;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:2,0:1:2.98:0,3,22	./.	./.	0/1:7,1:7:5.03:61,0,5	0/0:9,0:9:0.22:0,0,0	0/0:23,0:22:21.53:0,22,442	0/0:22,0:19:30.03:0,30,451	0/0:3,1:4:4.55:0,5,13	0/0:12,0:11:24.05:0,24,533	0/0:15,0:13:23.23:0,23,533	1/1:12,1:14:6.02:115,6,0	0/0:2,0:2:6.02:0,6,174	1/1:11,1:13:5.95:96,6,0	0/0:2,0:2:2.50:0,2,9	0/0:6,0:6:12.03:0,12,268	1/1:10,1:11:6.02:99,6,0	0/0:13,0:13:27.09:0,27,832	0/0:6,0:5:6.02:0,6,143	./.	0/1:21,0:17:41.39:78,0,41	0/1:11,1:12:0.93:51,0,1	0/0:8,0:8:3.46:0,3,113	0/0:32,0:31:66.20:0,66,1670	0/1:9,0:10:0.93:58,0,1	0/0:13,0:11:24.07:0,24,541	0/0:7,0:7:3.48:0,3,97	0/0:17,0:15:27.09:0,27,642
chr10	89484927	.	C	CAG	39.13	PASS	AB=0.869;AC=15;AF=0.288;AN=52;BaseQRankSum=4.598;DP=303;FS=1.309;HRun=0;HaplotypeScore=60.4058;InbreedingCoeff=0.2947;MQ=48.87;MQ0=17;MQRankSum=0.151;QD=0.47;ReadPosRankSum=-0.254;VQSLOD=1.2832;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,0:1:3:26,3,0	0/0:14,0:4:5.38:0,5,49	0/0:5,0:1:2.99:0,3,23	1/1:6,0:6:3.30:51,3,0	1/1:7,0:7:2.94:24,3,0	0/1:12,0:11:3.45:3,0,19	0/0:18,0:14:36.63:0,37,296	0/1:3,0:6:0:0,0,0	0/0:15,0:14:41.93:0,42,461	0/0:14,0:12:27.04:0,27,328	0/0:6,6:12:2.37:0,2,8	0/0:5,0:5:12:0,12,135	0/0:6,1:11:5.16:0,5,20	1/1:2,0:2:0.47:1,0,0	0/1:7,0:7:13.81:14,0,159	1/1:13,0:13:0.27:13,0,0	0/0:13,0:13:36.05:0,36,457	0/0:4,0:2:6.01:0,6,63	./.	0/1:18,0:13:16.90:17,0,35	0/0:8,0:11:2.82:0,3,17	0/0:9,0:9:12.02:0,12,146	0/0:33,0:32:78.11:0,78,980	0/1:7,0:9:2.46:18,0,2	0/0:16,0:15:44.95:0,45,476	0/0:6,0:6:2.37:0,2,13	0/0:17,0:15:41.92:0,42,426
chr10	89485039	.	CCCCCCGCCTTTTTATTGTGT	C	773.67	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=2.443;DP=236;FS=0.000;HRun=0;HaplotypeScore=114.5678;InbreedingCoeff=0.5450;MQ=100.78;MQ0=5;MQRankSum=-3.038;QD=32.24;ReadPosRankSum=3.744;VQSLOD=2.0993;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:38.96:0,39,1050	0/0:4,0:4:6.02:0,6,453	0/0:46,0:26:68.31:0,68,1417	0/0:33,0:18:41.66:0,42,992	0/0:1,0:1:2.98:0,3,22	1/1:8,0:8:8.90:396,9,0	1/1:8,8:16:11.79:483,12,0	0/0:6,0:6:13.29:0,13,567	0/0:6,0:6:12.04:0,12,455	0/0:2,0:2:6.02:0,6,170	./.	0/0:7,0:7:18.06:0,18,611	0/0:4,0:4:9.02:0,9,170	0/0:2,0:2:3.90:0,4,83	0/0:6,0:6:15.03:0,15,396	0/0:5,0:5:9.02:0,9,317	0/0:10,0:10:27.08:0,27,897	0/0:5,0:5:15.05:0,15,315	0/0:5,0:5:12.04:0,12,745	0/0:6,0:6:15.94:0,16,696	0/0:11,0:10:27.08:0,27,1137	./.	0/0:6,0:6:17.54:0,18,312	0/0:5,0:5:12.04:0,12,385	0/0:3,0:3:6.02:0,6,273	0/0:4,0:4:9.03:0,9,342	0/0:5,0:5:2.76:0,3,122	0/0:7,0:7:15.02:0,15,788
chr10	89485043	.	CCG	C	48.06	PASS	AB=0.947;AC=13;AF=0.250;AN=52;BaseQRankSum=3.621;DP=201;FS=7.725;HRun=0;HaplotypeScore=38.3396;InbreedingCoeff=0.0514;MQ=100.05;MQ0=4;MQRankSum=-0.712;QD=0.62;ReadPosRankSum=2.072;VQSLOD=-0.0342;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:8,6:14:0.26:0,0,82	0/0:3,0:3:5.78:0,6,36	0/0:38,0:22:18.42:0,18,276	0/0:26,0:14:0.72:0,1,125	0/0:2,0:2:2.97:0,3,20	1/1:4,0:4:7:33,7,0	1/1:9,0:9:6.69:32,7,0	0/0:5,0:5:6.83:0,7,55	0/1:5,0:5:13.86:17,0,14	0/0:4,0:4:2.91:0,3,22	./.	0/0:6,0:6:3.63:0,4,35	0/0:2,0:2:2.53:0,3,10	0/0:3,0:3:5.66:0,6,50	0/1:4,0:4:11.38:11,0,31	0/0:5,0:5:2.93:0,3,36	0/1:12,1:13:26.99:27,0,96	1/1:7,0:7:2.13:6,2,0	0/0:4,0:4:8.98:0,9,81	0/0:7,0:7:2.34:0,2,50	0/1:11,0:10:38.97:39,0,84	./.	0/1:5,0:5:0.09:0,0,0	0/1:6,0:6:6.93:7,0,43	0/0:3,0:3:5.90:0,6,45	0/0:5,0:5:2.92:0,3,26	0/0:6,0:6:3.43:0,3,19	0/0:4,0:4:8.94:0,9,65
chr10	89485960	.	A	AC	3337.98	PASS	AB=1.000;AC=53;AF=0.981;AN=54;BaseQRankSum=-1.698;DP=232;FS=0.000;HRun=1;HaplotypeScore=75.2580;InbreedingCoeff=0.2603;MQ=53.05;MQ0=0;MQRankSum=-1.732;QD=14.58;ReadPosRankSum=0.437;VQSLOD=3.0275;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,6:8:14.53:81,15,0	1/1:0,2:2:5.81:31,6,0	1/1:3,0:3:5.60:26,6,0	0/1:3,0:3:1.46:2,0,1	1/1:0,3:3:5.78:31,6,0	1/1:1,5:6:17.48:103,17,0	1/1:2,5:7:20.48:122,20,0	1/1:3,24:27:69.28:378,69,0	1/1:1,9:10:29:160,29,0	1/1:0,5:5:14.56:81,15,0	1/1:2,6:8:20.33:118,20,0	1/1:2,6:8:17.42:97,17,0	1/1:1,5:6:14.37:74,14,0	1/1:2,13:15:39.79:210,40,0	1/1:3,5:8:23.45:152,23,0	1/1:1,7:8:23.30:138,23,0	1/1:1,7:8:14.62:88,15,0	1/1:1,6:7:20.35:117,20,0	1/1:0,3:3:8.73:49,9,0	1/1:1,11:12:31.93:176,32,0	1/1:4,4:8:20.71:144,21,0	1/1:4,5:9:17.27:99,17,0	1/1:0,11:11:31.81:173,32,0	./.	1/1:0,9:9:26.16:144,26,0	1/1:2,10:12:34.91:194,35,0	1/1:2,13:15:39.70:213,40,0	1/1:2,6:8:23.29:137,23,0
chr10	89487740	.	T	TA	5058.61	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-7.660;DP=633;FS=1.568;HRun=6;HaplotypeScore=70.0427;InbreedingCoeff=0.9961;MQ=70.61;MQ0=0;MQRankSum=-1.118;QD=34.65;ReadPosRankSum=2.331;VQSLOD=4.3528;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.09:0,42,428	0/0:5,0:5:15.03:0,15,153	0/0:23,0:21:51.07:0,51,506	0/0:17,0:16:20.50:0,20,277	1/1:3,23:26:75.24:937,75,0	0/0:25,0:25:72.16:0,72,734	0/0:12,0:12:33.08:0,33,337	0/0:28,0:28:72.14:0,72,724	1/1:3,15:18:48.15:599,48,0	0/0:34,0:34:99:0,102,1040	0/0:34,0:34:84.16:0,84,847	1/1:3,18:21:60.19:746,60,0	0/0:16,0:16:45.10:0,45,458	1/1:1,9:10:30.10:377,30,0	0/0:13,0:13:36.08:0,36,367	0/0:28,1:29:49.50:0,49,819	0/0:24,0:24:69.11:0,69,684	0/0:15,0:15:42.09:0,42,428	0/0:17,0:17:39.08:0,39,397	0/0:31,0:31:87.11:0,87,855	1/1:3,19:22:60.19:754,60,0	1/1:5,20:25:69.16:827,69,0	0/0:32,0:32:83:0,83,830	0/0:26,0:26:46.44:0,46,671	1/1:5,19:24:66.20:819,66,0	0/0:36,0:36:99:0,99,1003	0/0:28,0:28:72.15:0,72,732	0/0:26,0:26:78.14:0,78,780
chr10	89487800	.	T	TA	4438.20	PASS	AB=0.897;AC=33;AF=0.589;AN=56;BaseQRankSum=8.092;DP=583;FS=1.616;HRun=11;HaplotypeScore=100.7527;InbreedingCoeff=0.8093;MQ=72.36;MQ0=1;MQRankSum=-3.981;QD=12.79;ReadPosRankSum=-4.009;VQSLOD=3.8453;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:19:43:234,43,0	0/1:4,0:4:9.58:10,0,17	0/1:20,0:10:7.41:7,0,58	0/0:17,0:15:5.89:0,6,41	1/1:8,15:24:44.89:417,45,0	1/1:2,0:20:45.73:242,46,0	1/1:2,1:18:31.70:191,32,0	1/1:24,1:41:63.16:329,63,0	1/1:7,16:23:54.11:540,54,0	0/0:33,0:33:83.36:0,83,629	0/0:30,0:30:77.65:0,78,600	1/1:11,13:24:42.10:428,42,0	0/0:22,0:22:53.78:0,54,418	1/1:3,7:10:24.02:235,24,0	0/1:5,0:9:0.87:42,0,1	0/0:26,0:26:65.67:0,66,505	1/1:14,0:19:17.62:90,18,0	0/0:16,0:16:35.42:0,35,261	1/1:12,0:15:22.86:117,23,0	1/1:23,0:30:56.29:289,56,0	1/1:6,3:9:12.01:115,12,0	1/1:5,10:15:42.02:398,42,0	0/0:21,0:23:44.31:0,44,401	0/0:17,0:18:33.35:0,33,324	1/1:7,12:19:45.09:453,45,0	0/0:28,1:29:47.27:0,47,545	1/1:23,0:28:56.51:300,57,0	0/0:21,0:21:56.77:0,57,441
chr10	89487875	.	CT	C	3651.42	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=1.773;DP=593;FS=1.631;HRun=11;HaplotypeScore=74.0775;InbreedingCoeff=0.9430;MQ=71.01;MQ0=0;MQRankSum=-0.185;QD=19.22;ReadPosRankSum=3.095;VQSLOD=4.7437;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:28:64.91:519,65,0	0/0:1,0:7:14.41:0,14,78	0/0:18,0:16:25.66:0,26,272	0/0:10,0:10:14.70:0,15,121	1/1:6,27:33:50.72:567,51,0	0/0:24,0:24:57.14:0,57,608	0/0:21,2:24:7.69:0,8,477	0/0:8,0:27:60.30:0,60,332	1/1:3,27:30:50.71:567,51,0	0/0:28,0:28:57.14:0,57,607	0/0:26,0:26:72.17:0,72,754	1/1:3,27:30:46.08:584,46,0	0/0:20,0:20:39.08:0,39,539	1/1:3,12:15:26.96:222,27,0	0/0:1,0:8:17.20:0,17,97	0/0:20,3:23:1.86:0,2,431	0/0:1,0:22:48.52:0,49,248	0/0:9,0:9:15.04:0,15,160	0/0:3,0:17:42.78:0,43,232	0/0:11,0:27:54.68:0,55,324	1/1:0,21:21:53.94:443,54,0	1/1:2,13:15:41.92:340,42,0	0/0:18,1:19:28.69:0,29,487	0/0:22,0:22:57.14:0,57,607	1/1:1,17:18:50.85:410,51,0	0/0:28,1:29:47.53:0,48,705	0/0:6,0:28:66.07:0,66,371	0/0:13,0:13:24.04:0,24,247
chr10	89489763	.	CTTT	C	4726.87	PASS	AB=0.566;AC=23;AF=0.411;AN=56;BaseQRankSum=-2.325;DP=627;FS=2.394;HRun=13;HaplotypeScore=115.4449;InbreedingCoeff=0.7826;MQ=71.98;MQ0=4;MQRankSum=-3.177;QD=16.76;ReadPosRankSum=1.848;VQSLOD=3.8410;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,33:41:35.77:870,36,0	0/0:0,0:4:7.22:0,7,48	0/0:36,0:19:29.80:0,30,378	0/0:33,0:21:21.49:0,21,447	1/1:4,14:18:35.98:419,36,0	0/0:3,0:24:22.22:0,22,53	0/0:5,0:27:31.44:0,31,141	1/1:11,14:26:39:462,39,0	1/1:2,10:12:27.07:328,27,0	0/0:27,0:29:60.14:0,60,948	0/0:16,0:17:36.07:0,36,526	1/1:2,11:13:30.01:348,30,0	0/0:15,0:18:42.08:0,42,685	1/1:2,21:23:45.10:547,45,0	0/1:7,1:21:27.86:28,0,32	0/0:21,0:26:69.11:0,69,1082	0/1:8,1:33:5.57:6,0,51	0/0:23,0:24:72.22:0,72,1236	1/1:4,12:16:32.94:400,33,0	0/1:2,1:18:11.23:11,0,65	1/1:9,13:23:38.19:451,38,0	1/1:5,13:18:33.03:399,33,0	0/0:18,0:19:45.12:0,45,742	0/0:13,0:15:42.10:0,42,716	1/1:4,15:18:39.04:458,39,0	0/0:30,0:31:78.22:0,78,1314	0/0:3,0:36:16.15:0,16,62	0/0:5,0:5:15.04:0,15,258
chr10	89490648	.	TTC	T	147.51	PASS	AB=0.917;AC=8;AF=0.143;AN=56;BaseQRankSum=5.053;DP=554;FS=3.723;HRun=0;HaplotypeScore=78.8262;InbreedingCoeff=0.2889;MQ=64.06;MQ0=11;MQRankSum=-0.913;QD=1.52;ReadPosRankSum=0.148;VQSLOD=1.2918;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:2.01:2,0,189	0/0:5,0:5:0.47:0,0,2	0/0:28,0:15:14.79:0,15,196	0/0:41,0:18:24.54:0,25,314	0/1:11,3:14:26.64:27,0,233	0/0:20,0:21:30.98:0,31,573	0/0:25,3:28:27.38:0,27,864	0/0:17,0:16:8.75:0,9,68	0/0:22,0:22:12.79:0,13,645	0/0:25,0:25:12.32:0,12,599	0/1:12,0:12:14.54:15,0,256	0/0:23,1:24:12.22:0,12,652	0/0:17,0:17:36.05:0,36,500	0/0:22,0:22:3.55:0,4,521	1/1:21,0:21:14.39:138,14,0	0/0:29,0:29:52.99:0,53,804	1/1:15,0:14:4.67:76,5,0	0/0:17,0:17:35.98:0,36,504	0/0:9,0:8:9.99:0,10,55	0/0:5,0:5:3.01:0,3,38	0/0:31,0:31:4.50:0,4,789	0/0:21,2:23:12.54:0,13,631	0/0:17,0:17:39.07:0,39,502	0/0:21,2:23:18.43:0,18,759	0/0:16,0:16:33.06:0,33,414	0/0:21,0:21:30.10:0,30,442	0/0:16,0:16:11.94:0,12,99	0/1:9,2:11:19.37:19,0,172
chr10	89490667	.	T	TC	595.83	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=6.400;DP=562;FS=5.088;HRun=1;HaplotypeScore=68.4009;InbreedingCoeff=0.7802;MQ=56.90;MQ0=19;MQRankSum=0.410;QD=11.46;ReadPosRankSum=-0.517;VQSLOD=1.5830;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:5.54:0,6,111	1/1:1,6:5:6.02:79,6,0	0/0:33,0:10:23.32:0,23,277	0/0:50,0:13:36:0,36,416	0/0:17,0:17:41.91:0,42,493	0/0:23,0:23:60.03:0,60,748	0/0:27,0:27:75.03:0,75,944	0/0:18,0:17:21.34:0,21,150	0/0:24,0:24:66.97:0,67,859	0/0:20,0:20:56.97:0,57,697	0/0:16,0:16:38.91:0,39,475	0/0:25,0:25:68.98:0,69,848	0/0:17,0:17:51.16:0,51,655	0/0:23,0:23:59.98:0,60,742	1/1:10,7:17:31.36:387,31,0	0/0:26,0:26:78.23:0,78,989	1/1:7,5:10:18.14:261,18,0	0/0:17,0:17:45.15:0,45,580	0/0:14,0:12:22.50:0,22,122	0/0:4,0:4:6.28:0,6,38	0/0:31,0:31:90.08:0,90,1091	0/0:23,0:23:62.99:0,63,783	0/0:17,0:17:45.15:0,45,578	0/0:28,0:27:74.83:0,75,922	0/0:14,0:14:39.12:0,39,488	0/0:14,0:14:36.10:0,36,452	0/1:16,0:16:3.32:3,0,35	0/0:10,0:10:23.86:0,24,273
chr10	89490668	.	CT	C	416.38	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=8.350;DP=565;FS=4.100;HRun=1;HaplotypeScore=67.2303;InbreedingCoeff=0.6783;MQ=56.96;MQ0=19;MQRankSum=1.411;QD=6.94;ReadPosRankSum=-1.638;VQSLOD=0.0785;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:55.49:55,0,85	1/1:6,0:4:8.61:47,9,0	0/0:34,0:10:21.80:0,22,296	0/0:50,0:13:35.75:0,36,399	0/0:18,0:18:41.21:0,41,499	0/0:22,0:22:58.43:0,58,827	0/0:27,0:27:71.39:0,71,1069	0/0:16,1:16:18.78:0,19,102	0/0:24,0:24:54.73:0,55,897	0/0:21,0:21:56.20:0,56,778	0/0:18,0:18:35.42:0,35,482	0/0:25,0:25:65.16:0,65,910	0/0:19,0:19:51.15:0,51,701	0/0:22,0:22:59.52:0,60,798	1/1:15,2:17:40.43:267,40,0	0/0:26,0:26:78.22:0,78,1087	1/1:11,1:10:28.67:180,29,0	0/0:16,0:16:45.15:0,45,661	0/0:14,0:12:18.88:0,19,94	0/1:5,0:5:15.96:16,0,41	0/0:31,0:31:84.22:0,84,1083	0/0:23,0:23:59.45:0,59,867	0/0:17,0:17:45.12:0,45,631	0/0:28,0:27:71.33:0,71,1002	0/0:13,0:13:39.08:0,39,495	0/0:14,0:14:39.11:0,39,542	0/0:16,0:16:12.47:0,12,56	0/0:10,0:10:20.30:0,20,280
chr10	89490669	.	T	TCTCCCC	1115.11	PASS	AB=0.886;AC=12;AF=0.214;AN=56;BaseQRankSum=3.066;DP=564;FS=12.340;HRun=0;HaplotypeScore=122.3727;InbreedingCoeff=0.5580;MQ=56.03;MQ0=19;MQRankSum=-4.326;QD=9.87;ReadPosRankSum=-4.004;VQSLOD=-0.1427;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:99:125,0,109	1/1:6,0:4:2.59:19,3,0	0/0:33,0:9:18.73:0,19,318	0/0:49,0:12:10.56:0,11,317	0/0:16,0:16:42.10:0,42,654	0/0:22,0:22:60.21:0,60,1219	0/0:27,0:27:75.25:0,75,1555	1/1:5,10:17:26.70:337,27,0	0/0:24,0:24:71.26:0,71,1336	0/0:20,0:20:54.13:0,54,1047	0/0:18,0:18:39.12:0,39,732	0/0:25,0:25:69.22:0,69,1216	0/0:19,0:19:51.11:0,51,878	0/0:21,0:21:63.17:0,63,1118	0/1:19,0:19:27.57:28,0,62	0/0:26,0:26:77.48:0,77,1513	0/1:13,0:11:28.18:28,0,33	0/0:15,0:15:45.15:0,45,908	1/1:13,0:12:27.75:317,28,0	1/1:5,0:5:12.03:173,12,0	0/0:32,0:32:86.20:0,86,1470	0/0:23,0:23:63.19:0,63,1173	0/0:17,0:17:42.13:0,42,812	0/0:28,0:27:75.15:0,75,1476	0/0:13,0:13:33.08:0,33,596	0/0:13,0:13:38.71:0,39,703	0/1:3,13:19:2.85:254,0,3	0/0:10,0:10:23.86:0,24,384
chr10	89491951	.	AAGAAGAGG	A	3105.81	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.457;DP=682;FS=0.000;HRun=0;HaplotypeScore=176.3097;InbreedingCoeff=0.9608;MQ=66.10;MQ0=1;MQRankSum=-10.208;QD=42.55;ReadPosRankSum=3.832;VQSLOD=3.1212;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,111,4204	1/1:1,5:6:6.02:160,6,0	0/0:19,0:19:39.58:0,40,1328	0/0:28,0:25:55.84:0,56,1297	0/0:25,0:25:69.22:0,69,2675	0/0:14,0:14:36.12:0,36,1538	0/0:40,0:40:90.31:0,90,3557	0/0:27,0:27:66.19:0,66,2225	0/0:24,0:24:66.23:0,66,2526	0/0:15,0:15:42.09:0,42,1678	0/0:23,0:23:63.20:0,63,2480	0/0:32,0:31:87.26:0,87,3329	0/0:19,0:19:54.19:0,54,2177	0/0:19,0:19:45.15:0,45,1767	1/1:5,29:34:66.23:1725,66,0	0/0:28,0:28:81.27:0,81,3278	1/1:5,28:33:51.18:1356,51,0	0/0:31,0:31:78.27:0,78,3077	0/0:12,0:12:27.07:0,27,1041	0/0:19,0:19:51.17:0,51,2006	0/0:32,0:31:84.26:0,84,3156	0/0:13,0:13:36.08:0,36,1316	0/0:20,0:20:57.18:0,57,2067	0/0:41,0:40:99:0,114,4407	0/0:18,0:18:39.13:0,39,1550	0/0:25,0:25:60.19:0,60,2287	0/0:28,0:28:75.26:0,75,2917	0/0:12,0:12:30.10:0,30,1281
chr10	89491987	.	AT	A	1331.69	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.864;DP=668;FS=10.924;HRun=1;HaplotypeScore=76.5604;InbreedingCoeff=0.9445;MQ=59.97;MQ0=3;MQRankSum=3.443;QD=35.99;ReadPosRankSum=-0.161;VQSLOD=2.9066;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:99:1427,102,0	0/0:4,0:4:9.03:0,9,144	0/0:18,0:12:32.60:0,33,491	0/0:21,0:16:32.87:0,33,555	0/0:29,0:29:87.30:0,87,1388	0/0:16,0:16:45.15:0,45,719	0/0:30,0:30:90.28:0,90,1390	0/0:26,0:26:75.23:0,75,1137	0/0:22,0:22:63.20:0,63,984	0/0:17,0:17:51.17:0,51,814	0/0:24,0:24:72.25:0,72,1151	0/0:28,0:27:81.28:0,81,1295	0/0:15,0:15:45.15:0,45,718	0/0:19,0:19:54.18:0,54,860	0/0:32,0:32:72.25:0,72,1146	0/0:32,0:32:96.33:0,96,1534	0/0:31,0:31:78.25:0,78,1220	0/0:32,0:32:93.27:0,93,1459	0/0:21,0:19:51.17:0,51,794	0/0:22,0:22:60.16:0,60,890	0/0:28,0:27:78.23:0,78,1199	0/0:20,0:20:57.19:0,57,906	0/0:20,0:20:57.18:0,57,887	0/0:39,0:39:99:0,117,1845	0/0:13,0:12:33.11:0,33,525	0/0:28,0:28:84.29:0,84,1342	0/0:27,0:27:81.28:0,81,1289	0/0:17,0:17:48.16:0,48,767
chr10	89492179	.	GGAAA	G	1495.46	PASS	AB=0.871;AC=11;AF=0.196;AN=56;BaseQRankSum=2.418;DP=537;FS=3.512;HRun=0;HaplotypeScore=92.7907;InbreedingCoeff=0.4756;MQ=50.45;MQ0=46;MQRankSum=1.104;QD=8.64;ReadPosRankSum=0.169;VQSLOD=2.1869;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:28:58.10:169,0,58	1/1:4,4:7:21.01:306,21,0	0/0:39,0:7:12.78:0,13,100	0/0:26,0:10:10.71:0,11,52	0/0:20,0:18:38.95:0,39,532	0/0:15,0:15:29.91:0,30,337	0/0:22,0:21:50.32:0,50,460	0/1:21,0:24:8.41:106,0,8	0/0:13,0:13:36.06:0,36,461	0/0:27,0:26:74.73:0,75,1121	0/0:20,0:19:44.95:0,45,672	0/0:16,0:12:34.47:0,34,320	0/0:15,0:14:36.06:0,36,458	0/0:14,0:13:26.63:0,27,317	1/1:11,3:13:34.57:419,35,0	0/0:16,0:16:45.10:0,45,765	1/1:7,16:22:13.80:309,14,0	0/0:17,0:16:33.07:0,33,575	0/1:23,0:21:63.51:163,0,64	0/1:18,0:19:2.94:99,0,3	0/0:11,0:9:8.82:0,9,90	0/0:13,0:12:32.96:0,33,372	0/0:18,0:17:50.29:0,50,870	0/0:22,0:20:51.16:0,51,610	0/0:8,0:8:20.88:0,21,190	0/0:15,0:13:35.13:0,35,502	0/1:16,0:18:31.12:89,0,31	0/0:15,0:9:24:0,24,483
chr10	89492296	.	A	AT	1329.51	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.703;DP=528;FS=1.957;HRun=7;HaplotypeScore=67.4854;InbreedingCoeff=0.9109;MQ=73.45;MQ0=2;MQRankSum=-2.551;QD=27.13;ReadPosRankSum=-1.640;VQSLOD=3.8206;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.06:0,81,771	1/1:5,5:10:24.05:267,24,0	0/0:30,0:15:6.41:0,6,67	0/0:23,0:14:3.50:0,4,43	0/0:22,0:22:54.05:0,54,511	0/0:19,0:19:51.06:0,51,487	0/0:10,0:10:30.03:0,30,283	0/0:27,0:27:65.72:0,66,631	0/0:9,0:9:21.02:0,21,199	0/0:21,0:21:48.06:0,48,463	0/0:18,0:18:42.03:0,42,395	0/0:15,0:15:36.01:0,36,331	0/0:18,0:18:39.02:0,39,366	0/0:14,0:14:35.98:0,36,325	1/1:4,9:13:27.08:326,27,0	0/0:22,0:22:60.04:0,60,559	1/1:7,19:26:78.15:878,78,0	0/0:17,0:17:42.02:0,42,397	0/0:15,0:15:33.01:0,33,302	0/0:21,0:21:45.03:0,45,423	0/0:12,0:12:33.04:0,33,312	0/0:18,0:18:36.03:0,36,336	0/0:21,0:21:54.09:0,54,521	0/0:15,0:15:42:0,42,390	0/0:18,0:17:48.01:0,48,441	0/0:22,0:22:51.07:0,51,492	0/0:27,0:26:63.01:0,63,582	0/0:13,0:13:39.05:0,39,368
chr10	89492317	.	G	GA	1234.50	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-3.220;DP=524;FS=4.597;HRun=12;HaplotypeScore=67.5517;InbreedingCoeff=0.6549;MQ=67.99;MQ0=4;MQRankSum=0.964;QD=11.99;ReadPosRankSum=-3.923;VQSLOD=2.4429;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,1:35:42.42:0,42,473	0/0:2,0:10:16.29:0,16,48	0/0:35,0:15:0.76:0,1,62	0/0:21,0:12:1.99:0,2,43	0/0:21,0:22:52.54:0,53,369	0/0:15,1:16:6.57:0,7,211	0/0:14,0:16:33.83:0,34,228	1/1:13,16:29:29.13:428,29,0	0/0:11,0:11:29.72:0,30,212	0/0:22,2:25:23.50:0,23,326	0/0:14,0:14:23.12:0,23,174	0/0:12,0:12:21.27:0,21,171	0/0:15,0:15:20.78:0,21,153	0/1:14,0:14:23.11:23,0,164	0/0:2,0:20:31.35:0,31,97	0/0:15,2:17:6.60:0,7,211	0/0:2,0:19:30.55:0,31,90	0/0:21,0:22:20.67:0,21,264	1/1:4,12:16:34.07:295,34,0	1/1:7,13:21:35.81:316,36,0	0/0:8,0:8:17.88:0,18,131	0/0:9,0:9:14.19:0,14,89	0/0:16,3:19:3.59:0,4,189	0/0:18,0:17:6.60:0,7,211	0/0:14,0:13:32.76:0,33,241	0/0:17,3:21:23.54:0,24,326	1/1:10,10:21:6.91:328,7,0	0/0:18,0:20:33.80:0,34,229
chr10	89493022	.	C	CTT	2876.48	PASS	AB=0.793;AC=28;AF=0.519;AN=54;BaseQRankSum=4.508;DP=546;FS=0.433;HRun=14;HaplotypeScore=83.0631;InbreedingCoeff=0.8252;MQ=59.52;MQ0=0;MQRankSum=-3.618;QD=9.92;ReadPosRankSum=-3.841;VQSLOD=1.2951;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,1:36:28.46:174,28,0	0/1:6,0:6:7.99:8,0,63	0/0:8,0:5:2.63:0,3,25	./.	1/1:16,0:16:8.75:67,9,0	1/1:3,1:15:11.28:106,11,0	0/1:7,1:24:1.48:76,0,1	1/1:14,17:33:59.14:578,59,0	1/1:20,0:20:22:163,22,0	0/0:28,0:30:44.01:0,44,357	0/0:10,0:10:8.62:0,9,71	1/1:12,0:13:20.68:165,21,0	0/0:17,0:17:11.60:0,12,100	1/1:8,0:9:11.97:98,12,0	0/0:25,0:31:31.70:0,32,329	0/0:21,0:28:30.49:0,30,245	0/0:27,0:30:47.07:0,47,409	0/0:22,0:26:19.36:0,19,293	1/1:8,16:29:55.23:558,55,0	1/1:8,9:18:35.76:316,36,0	1/1:21,0:17:26.26:162,26,0	1/1:7,0:7:12.01:110,12,0	0/0:11,0:13:18.80:0,19,174	0/0:21,0:22:38.57:0,39,319	1/1:20,0:20:29.89:257,30,0	0/0:22,0:25:37.77:0,38,277	1/1:6,14:23:23.38:250,23,0	0/0:12,0:15:20:0,20,195
chr10	89493034	.	T	TTTTTC	2619.12	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=1.629;DP=560;FS=17.632;HRun=0;HaplotypeScore=108.4046;InbreedingCoeff=0.6869;MQ=58.22;MQ0=2;MQRankSum=-3.487;QD=13.43;ReadPosRankSum=-3.864;VQSLOD=0.6915;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:41.50:0,41,322	0/0:8,0:8:21.44:0,21,245	0/0:11,0:5:4.38:0,4,75	0/0:3,0:1:0.47:0,0,1	1/1:2,10:18:11.91:174,12,0	0/0:13,0:13:11.37:0,11,151	0/0:24,0:24:42.12:0,42,313	0/1:28,0:27:99:160,0,124	1/1:9,1:27:28.18:395,28,0	0/0:30,0:30:71.42:0,71,890	0/0:11,0:11:20.73:0,21,212	1/1:4,8:16:23.74:451,24,0	0/0:16,0:16:38.79:0,39,421	1/1:3,0:13:14.92:144,15,0	0/0:32,0:32:81.68:0,82,976	0/0:24,0:24:58.99:0,59,746	0/0:29,0:29:71.93:0,72,1004	0/0:22,0:22:58.70:0,59,825	0/1:26,0:25:67.47:67,0,177	0/1:19,0:19:65.30:65,0,89	1/1:15,0:13:32.76:369,33,0	1/1:0,6:8:12.04:323,12,0	0/0:16,0:16:41.15:0,41,466	0/0:22,0:22:60.07:0,60,830	1/1:3,10:23:29.84:667,30,0	0/0:28,0:28:68.81:0,69,826	0/0:24,0:24:19.69:0,20,140	0/0:18,0:17:32.98:0,33,545
chr10	89493481	.	T	TC	2102.03	PASS	AB=0.855;AC=24;AF=0.444;AN=54;BaseQRankSum=4.018;DP=342;FS=3.643;HRun=9;HaplotypeScore=55.7489;InbreedingCoeff=0.7224;MQ=97.32;MQ0=2;MQRankSum=-0.008;QD=11.68;ReadPosRankSum=-0.206;VQSLOD=2.7116;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:10.94:48,11,0	./.	0/0:27,0:20:4.97:0,5,148	0/1:36,0:33:27.86:28,0,210	1/1:4,0:4:8.99:76,9,0	0/0:13,1:14:2.81:0,3,253	0/0:14,0:14:13.37:0,13,260	0/1:9,5:14:37.06:85,0,37	1/1:11,0:11:29.57:195,30,0	0/0:5,0:5:8.98:0,9,76	0/0:3,0:3:9:0,9,77	1/1:16,0:16:41.54:302,42,0	0/0:12,0:12:29.98:0,30,256	1/1:13,0:13:38.53:265,39,0	0/0:1,0:10:18.33:0,18,54	0/0:19,0:19:44.98:0,45,391	0/0:2,0:18:32.59:0,33,95	0/0:13,0:13:23.98:0,24,208	1/1:4,5:9:14.99:147,15,0	1/1:2,0:2:3.48:33,3,0	1/1:33,0:33:79.76:518,80,0	1/1:6,0:6:15:133,15,0	0/0:3,0:3:8.97:0,9,73	0/0:5,0:7:13.04:0,13,84	1/1:6,0:6:11.84:80,12,0	0/0:6,0:6:12:0,12,104	1/1:0,15:15:36.10:396,36,0	0/0:10,0:10:23.97:0,24,208
chr10	89493485	.	C	CCA	661.71	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=4.522;DP=337;FS=0.000;HRun=0;HaplotypeScore=67.1863;InbreedingCoeff=0.9032;MQ=92.85;MQ0=2;MQRankSum=-1.082;QD=6.55;ReadPosRankSum=2.914;VQSLOD=2.8813;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:11:12.04:205,12,0	0/0:1,0:1:3:0,3,26	0/0:29,0:20:31.19:0,31,443	0/0:36,0:30:38.33:0,38,615	1/1:4,0:4:7.30:28,7,0	0/0:14,0:14:38.61:0,39,534	0/0:13,0:13:34.67:0,35,502	0/0:14,0:14:25.51:0,26,222	1/1:12,0:12:24.68:87,25,0	0/0:5,0:5:15.02:0,15,187	0/0:3,0:3:9.03:0,9,136	1/1:14,0:14:31.71:110,32,0	0/0:12,0:12:33.10:0,33,479	1/1:13,0:13:31.98:111,32,0	0/0:9,0:9:26.78:0,27,191	0/0:20,0:20:54.16:0,54,760	0/0:16,0:16:47.62:0,48,339	0/0:11,0:11:30.07:0,30,412	0/0:8,0:8:15.73:0,16,80	0/0:4,0:4:11.49:0,11,89	1/1:34,0:34:67.23:238,67,0	1/1:7,0:7:12.33:46,12,0	0/0:4,0:4:9.03:0,9,136	0/0:7,0:7:21:0,21,228	1/1:6,0:6:9.98:35,10,0	0/0:5,0:5:12.04:0,12,181	0/0:15,0:15:32.95:0,33,123	0/0:10,0:10:27.96:0,28,386
chr10	89493486	.	C	CA	3118.36	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-4.748;DP=338;FS=2.768;HRun=0;HaplotypeScore=52.1090;InbreedingCoeff=0.7710;MQ=90.91;MQ0=2;MQRankSum=0.499;QD=24.36;ReadPosRankSum=3.216;VQSLOD=4.4532;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:10.20:41,10,0	0/0:1,0:1:3:0,3,25	0/0:28,0:19:13.78:0,14,362	0/0:36,0:30:28.12:0,28,476	1/1:1,4:5:9.03:126,9,0	0/0:14,0:14:31.95:0,32,480	0/0:12,0:12:34.67:0,35,465	0/0:12,0:12:0.34:0,0,165	1/1:0,12:12:30.10:427,30,0	0/0:5,0:5:15.02:0,15,177	0/0:3,0:3:9.03:0,9,125	1/1:1,13:14:39.13:551,39,0	0/0:12,0:12:33.10:0,33,443	1/1:0,15:15:39.13:554,39,0	0/0:11,0:11:25.96:0,26,140	0/0:20,0:20:57.15:0,57,730	0/0:16,0:16:45.95:0,46,246	0/0:10,0:10:30.07:0,30,384	0/1:8,0:8:14.87:15,0,16	0/0:4,0:4:0.28:0,0,61	1/1:1,34:35:81.27:1155,81,0	1/1:0,8:8:15.05:210,15,0	0/0:4,0:4:9.03:0,9,123	0/0:7,0:7:20.91:0,21,210	1/1:0,6:6:12.04:171,12,0	0/0:5,0:5:12.04:0,12,168	1/1:15,0:15:11.70:69,12,0	0/0:10,0:10:29.82:0,30,371
chr10	89497728	.	A	AC	628.75	PASS	AB=0.716;AC=4;AF=0.071;AN=56;BaseQRankSum=3.148;DP=496;FS=23.060;HRun=0;HaplotypeScore=87.2144;InbreedingCoeff=0.5838;MQ=62.09;MQ0=12;MQRankSum=-3.358;QD=14.29;ReadPosRankSum=1.608;VQSLOD=2.9482;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:50.69:0,51,413	0/1:9,7:16:4.42:261,0,4	0/0:36,0:12:16.78:0,17,129	0/0:33,0:6:7.19:0,7,85	0/0:22,0:22:51.68:0,52,469	0/0:16,0:14:36.39:0,36,315	0/0:12,0:12:27.66:0,28,209	0/0:16,0:15:39.75:0,40,333	0/0:7,0:7:15.73:0,16,153	0/0:25,0:25:68.87:0,69,638	0/0:17,0:17:50.07:0,50,495	0/0:21,0:20:56.16:0,56,533	0/0:13,0:13:38.92:0,39,361	0/0:22,0:22:52.55:0,53,491	1/1:7,7:14:33.01:314,33,0	0/0:13,0:13:26.93:0,27,246	0/1:9,5:13:6.41:170,0,6	0/0:24,0:24:62.41:0,62,575	0/0:13,0:10:21.54:0,22,171	0/0:9,0:8:20.83:0,21,156	0/0:12,0:11:32.98:0,33,325	0/0:11,0:10:23.97:0,24,219	0/0:18,0:18:45.95:0,46,401	0/0:11,0:10:21.06:0,21,276	0/0:19,0:19:47.16:0,47,466	0/0:27,0:27:71.27:0,71,624	0/0:14,0:13:32.91:0,33,282	0/0:19,0:18:53.72:0,54,481
chr10	89497731	.	AAAAAAAAAC	A	2216.34	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=-0.670;DP=533;FS=13.643;HRun=0;HaplotypeScore=148.9381;InbreedingCoeff=0.5907;MQ=60.03;MQ0=17;MQRankSum=-1.328;QD=11.03;ReadPosRankSum=-1.099;VQSLOD=1.8934;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:21:10.39:405,0,10	0/0:15,0:15:45.13:0,45,891	1/1:39,0:10:0.47:2,0,0	0/1:36,0:7:15.43:50,0,15	0/0:23,0:23:56.47:0,56,1264	1/1:17,1:16:38.50:496,39,0	1/1:18,1:19:27.15:326,27,0	0/1:18,0:17:8.70:192,0,9	0/0:7,0:7:20.22:0,20,423	0/0:24,0:24:53.85:0,54,1323	0/0:18,0:18:44.85:0,45,1196	0/0:22,0:21:60.09:0,60,1575	0/0:13,0:13:32.67:0,33,964	0/0:24,0:23:55.08:0,55,1415	0/0:13,0:13:22.54:0,23,415	0/0:12,0:12:26.73:0,27,677	0/0:15,0:14:30.27:0,30,585	0/0:24,0:24:34.48:0,34,1274	0/1:18,0:14:37.69:146,0,38	1/1:10,1:10:26.23:286,26,0	0/0:13,0:12:29.98:0,30,661	0/0:11,0:10:27.09:0,27,729	0/0:19,0:19:47.95:0,48,1431	0/0:14,0:12:30.07:0,30,828	0/0:17,0:17:45.11:0,45,1455	0/0:29,0:29:41.74:0,42,1371	1/1:19,1:19:50.55:488,51,0	0/0:19,0:18:15.40:0,15,607
chr10	89497740	.	CAA	C	235.38	PASS	AB=0.956;AC=8;AF=0.143;AN=56;BaseQRankSum=7.168;DP=565;FS=0.000;HRun=17;HaplotypeScore=100.9525;InbreedingCoeff=0.1529;MQ=58.46;MQ0=19;MQRankSum=-5.630;QD=1.85;ReadPosRankSum=3.109;VQSLOD=-0.7257;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:27:13.17:31,0,13	1/1:9,6:15:10.15:162,10,0	0/0:40,0:7:2.37:0,2,8	0/0:41,0:9:5.16:0,5,33	0/0:27,0:27:57.97:0,58,582	0/0:24,0:21:8.50:0,8,56	0/1:20,0:20:0.36:0,0,40	0/0:23,0:20:16.27:0,16,123	0/0:9,0:9:18.01:0,18,205	0/0:22,0:23:54.98:0,55,602	0/0:16,0:16:39.10:0,39,503	0/0:21,0:20:56.35:0,56,637	0/0:13,0:13:30.02:0,30,398	0/0:24,0:23:51.02:0,51,601	0/1:11,0:11:6.73:7,0,89	0/0:12,0:12:19.58:0,20,252	0/1:9,4:13:80.59:134,0,81	0/0:24,0:24:52.76:0,53,603	0/1:23,0:19:1.45:1,0,99	0/1:16,0:15:8.52:21,0,9	0/0:14,0:12:28.27:0,28,325	0/0:14,0:13:32.65:0,33,358	0/0:18,0:19:44.66:0,45,552	0/0:15,0:13:32.97:0,33,399	0/0:19,0:19:48.60:0,49,619	0/0:29,0:31:78.82:0,79,828	0/0:20,0:19:0.85:0,1,43	0/0:8,0:8:21.03:0,21,248
chr10	89497742	.	A	AAAAAAAAAC	1283.06	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=8.772;DP=577;FS=6.305;HRun=0;HaplotypeScore=177.3865;InbreedingCoeff=0.3154;MQ=59.30;MQ0=19;MQRankSum=-6.062;QD=7.42;ReadPosRankSum=2.884;VQSLOD=2.2930;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:29:43.89:44,0,94	1/1:11,4:15:35.66:855,36,0	0/0:40,0:7:2.26:0,2,8	0/0:44,0:11:6.56:0,7,43	0/0:27,0:27:47.72:0,48,767	0/1:24,0:21:39.63:51,0,40	0/1:21,0:21:11.25:11,0,105	0/0:23,0:20:15.18:0,15,109	0/0:9,0:9:17.99:0,18,224	0/0:23,0:23:61.70:0,62,999	0/0:18,0:18:43.62:0,44,638	0/0:21,0:20:57.10:0,57,866	0/0:15,0:15:35.95:0,36,509	0/0:24,0:23:51.84:0,52,731	1/1:10,0:10:11.94:131,12,0	0/0:13,0:13:23.10:0,23,459	1/1:13,0:12:9.74:247,10,0	0/0:25,0:25:29.13:0,29,807	0/1:22,0:18:33.98:34,0,116	0/1:16,0:15:49.63:50,0,50	0/0:14,0:12:27.86:0,28,357	0/0:15,0:14:35.57:0,36,508	0/0:19,0:19:44.04:0,44,738	0/0:16,0:14:32.98:0,33,595	0/0:19,0:19:48.61:0,49,832	0/0:30,0:30:76.90:0,77,996	0/1:22,0:21:24.34:24,0,102	0/0:9,0:8:23.21:0,23,368
chr10	89498267	.	T	TCA	3677.17	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.407;DP=1223;FS=15.752;HRun=0;HaplotypeScore=220.2632;InbreedingCoeff=0.9985;MQ=63.08;MQ0=7;MQRankSum=-3.127;QD=22.42;ReadPosRankSum=-0.986;VQSLOD=2.4232;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,43:55:99:1682,105,0	1/1:7,4:11:20.69:243,21,0	0/0:59,0:43:82.17:0,82,907	0/0:59,0:40:28.66:0,29,676	0/0:28,0:28:63.12:0,63,735	0/0:29,0:29:69.08:0,69,820	0/0:50,0:51:99:0,120,1447	0/0:64,0:64:99:0,130,1511	0/0:49,0:49:99:0,117,1382	0/0:52,0:52:99:0,117,1371	0/0:21,0:21:45.14:0,45,555	0/0:55,0:54:99:0,114,1399	0/0:55,0:55:99:0,129,1595	0/0:55,0:55:99:0,123,1502	1/1:37,30:65:60.01:1019,60,0	0/0:60,0:60:99:0,159,1915	1/1:18,13:31:53.12:734,53,0	0/0:26,0:26:60.19:0,60,743	0/0:25,0:25:45.31:0,45,619	0/0:25,0:25:48.12:0,48,579	0/0:105,0:105:99:0,229,2976	0/0:27,0:28:72.06:0,72,868	0/0:28,0:27:66.21:0,66,817	0/0:58,0:57:99:0,112,1619	0/0:32,0:33:80.37:0,80,906	0/0:47,0:47:99:0,129,1481	0/0:29,0:29:54.17:0,54,666	0/0:16,0:16:36.05:0,36,414
chr10	89498282	.	T	TACAC	1502.20	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.971;DP=1295;FS=2.181;HRun=0;HaplotypeScore=277.3559;InbreedingCoeff=0.9958;MQ=55.79;MQ0=13;MQRankSum=-4.948;QD=12.41;ReadPosRankSum=-1.164;VQSLOD=2.5902;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,122,913	1/1:8,4:12:18.03:308,18,0	0/0:64,0:32:40.15:0,40,538	0/0:68,0:41:51.96:0,52,755	0/0:27,0:27:51.13:0,51,810	0/0:32,0:32:60.18:0,60,993	0/0:55,0:55:99:0,122,1894	0/0:71,0:71:99:0,142,2058	0/0:56,0:57:99:0,114,1817	0/0:51,0:51:99:0,126,2007	0/0:17,0:17:30.10:0,30,515	0/0:57,0:58:99:0,108,1831	0/0:53,0:53:99:0,123,2062	0/0:54,0:54:99:0,117,1952	1/1:20,42:69:43.61:910,44,0	0/0:62,0:63:99:0,160,2603	1/1:16,19:38:22.62:426,23,0	0/0:27,0:27:58.42:0,58,1113	0/0:27,0:26:43.09:0,43,637	0/0:22,0:22:51.14:0,51,807	0/0:124,0:123:99:0,259,4653	0/0:27,0:27:69.24:0,69,1173	0/0:31,0:30:66.19:0,66,1053	0/0:62,0:61:99:0,144,2341	0/0:31,0:31:69.16:0,69,1109	0/0:47,0:46:99:0,111,1811	0/0:28,0:28:60.17:0,60,968	0/0:16,0:16:42.14:0,42,681
chr10	89498419	.	T	TACAC	7017.33	PASS	AB=0.826;AC=28;AF=0.500;AN=56;BaseQRankSum=9.730;DP=1108;FS=12.166;HRun=0;HaplotypeScore=309.7673;InbreedingCoeff=0.7459;MQ=48.76;MQ0=6;MQRankSum=-9.821;QD=11.68;ReadPosRankSum=-4.976;VQSLOD=1.9882;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:39:8.30:123,8,0	0/0:19,0:19:4.47:0,4,532	0/1:52,0:26:11.76:12,0,318	0/0:44,0:21:7.78:0,8,105	1/1:21,0:21:2.88:53,3,0	1/1:13,14:31:25.69:725,26,0	0/1:21,19:45:27.72:435,0,28	1/1:40,5:46:65.96:1088,66,0	1/1:58,0:58:61.96:861,62,0	0/0:52,0:51:93.26:0,93,1438	0/0:19,0:19:31.44:0,31,474	1/1:54,0:55:46.01:671,46,0	0/0:56,0:56:99:0,129,2036	1/1:48,0:47:19.67:435,20,0	0/0:75,0:77:99:0,156,2362	0/0:56,0:58:99:0,144,2305	0/0:33,0:33:35.47:0,35,713	0/0:18,0:19:25.01:0,25,452	1/1:11,13:24:39.60:815,40,0	1/1:7,16:25:17.87:422,18,0	1/1:68,0:67:2.83:20,3,0	1/1:32,0:32:2.97:37,3,0	0/0:30,0:30:63.20:0,63,1004	0/0:51,0:51:81.73:0,82,1300	1/1:29,0:29:14.77:213,15,0	0/0:36,0:37:84.24:0,84,1308	1/1:16,10:27:54.02:1108,54,0	0/0:12,0:12:30.10:0,30,490
chr10	89498438	.	A	ACACACG	6267.15	PASS	AB=0.938;AC=21;AF=0.375;AN=56;BaseQRankSum=6.924;DP=1171;FS=14.406;HRun=0;HaplotypeScore=395.1592;InbreedingCoeff=0.4317;MQ=45.45;MQ0=8;MQRankSum=-9.722;QD=10.26;ReadPosRankSum=0.840;VQSLOD=2.1454;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:49,0:48:41.69:91,0,42	0/0:19,0:19:34.03:0,34,859	0/0:48,0:22:47.10:0,47,693	0/0:42,0:21:47.92:0,48,501	1/1:11,11:25:2.79:43,3,0	1/1:28,0:28:31.80:294,32,0	0/1:43,0:44:99:133,0,164	0/1:42,0:45:99:260,0,346	1/1:20,31:55:59.76:1841,60,0	0/0:46,0:46:99:0,129,2338	0/0:20,0:20:35.95:0,36,696	1/1:22,30:58:61.51:1347,62,0	0/0:53,0:53:99:0,153,3097	1/1:23,29:56:10.68:928,11,0	0/0:75,0:75:99:0,180,3615	0/0:66,0:66:99:0,174,3548	0/0:29,0:30:68.07:0,68,1180	0/0:18,0:19:11.55:0,12,679	0/1:35,0:34:99:328,0,201	0/1:29,0:30:46.51:129,0,47	1/1:24,47:86:1.80:19,2,0	0/1:12,23:35:0.03:0,0,2	0/0:31,0:31:81.04:0,81,1578	0/0:53,0:53:87.82:0,88,1935	1/1:16,16:34:14.06:499,14,0	0/0:47,0:47:99:0,129,2276	0/1:26,0:28:59.80:355,0,60	0/0:11,0:11:33.10:0,33,729
chr10	89498440	.	ATG	A	1017.54	PASS	AB=0.969;AC=15;AF=0.268;AN=56;BaseQRankSum=4.144;DP=1127;FS=49.291;HRun=0;HaplotypeScore=347.7206;InbreedingCoeff=-0.1786;MQ=45.78;MQ0=7;MQRankSum=-3.780;QD=1.79;ReadPosRankSum=-7.349;VQSLOD=-0.1879;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:45,1:46:48.88:105,0,49	0/0:18,1:19:16.10:0,16,796	0/0:47,1:23:30.28:0,30,1000	0/0:38,0:19:49.93:0,50,780	0/0:23,1:25:5.28:0,5,24	0/1:26,0:26:2.29:2,0,84	0/1:42,2:44:0.50:1,0,174	0/1:40,4:44:99:290,0,301	0/1:49,0:49:99:183,0,123	0/0:46,0:46:99:0,132,2359	0/0:19,0:19:17.89:0,18,585	0/1:50,0:50:20.74:21,0,180	0/0:54,0:54:99:0,148,2893	0/1:57,0:56:90.65:205,0,91	0/0:73,0:73:99:0,183,3486	0/0:67,0:68:99:0,177,3306	0/0:28,0:30:29.66:0,30,903	0/1:16,1:19:56.75:57,0,513	0/1:30,1:30:73.02:73,0,85	0/1:27,2:29:12.03:85,0,12	1/1:79,0:80:5.16:27,5,0	0/1:34,0:33:7.21:7,0,23	0/0:31,0:31:74.83:0,75,1497	0/0:51,1:52:78.85:0,79,1707	0/1:28,1:29:41.89:76,0,42	0/0:45,0:45:99:0,129,2326	0/1:26,1:28:37.43:37,0,138	0/0:11,0:11:32.14:0,32,579
chr10	89498498	.	A	AC	15232.42	PASS	AB=0.752;AC=53;AF=0.946;AN=56;BaseQRankSum=-4.331;DP=911;FS=9.719;HRun=0;HaplotypeScore=339.0897;InbreedingCoeff=-0.0517;MQ=50.51;MQ0=4;MQRankSum=1.490;QD=16.72;ReadPosRankSum=2.359;VQSLOD=2.8710;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,16:38:3.02:407,0,3	1/1:11,5:16:38.74:371,39,0	0/1:14,6:10:81.54:82,0,173	0/1:14,6:11:78.38:161,0,78	1/1:14,17:31:42.07:442,42,0	1/1:12,12:24:46.95:383,47,0	1/1:5,26:31:37.30:227,37,0	1/1:11,14:25:71.64:717,72,0	1/1:21,21:43:78.41:659,78,0	1/1:18,27:45:83.62:994,84,0	1/1:12,6:18:30.09:358,30,0	1/1:24,27:51:95.67:979,96,0	1/1:29,14:43:99:1023,101,0	1/1:15,23:38:52.67:506,53,0	1/1:45,12:56:99:1393,128,0	1/1:36,14:50:99:1295,126,0	1/1:11,8:19:28.31:309,28,0	1/1:13,2:15:23.44:258,23,0	1/1:7,6:13:32.18:327,32,0	1/1:17,13:30:47.47:490,47,0	1/1:64,18:82:17.77:198,18,0	1/1:17,18:35:51.14:593,51,0	1/1:17,7:24:39.06:481,39,0	1/1:39,3:42:68.46:744,68,0	1/1:11,19:30:50.32:490,50,0	1/1:13,25:38:99:965,110,0	1/1:7,13:20:25.71:261,26,0	1/1:7,3:10:11.97:119,12,0
chr10	89498500	.	AC	A	10068.08	PASS	AB=0.796;AC=54;AF=0.964;AN=56;BaseQRankSum=0.211;DP=911;FS=10.486;HRun=2;HaplotypeScore=358.1297;InbreedingCoeff=-0.0235;MQ=50.56;MQ0=4;MQRankSum=2.218;QD=11.05;ReadPosRankSum=3.397;VQSLOD=2.2558;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,16:38:37.32:308,37,0	1/1:10,5:15:33.41:240,33,0	0/1:15,5:10:17.93:18,0,164	0/1:14,5:9:52.14:52,0,69	1/1:14,17:31:41.88:340,42,0	1/1:13,12:25:42.95:264,43,0	1/1:4,26:30:25.42:109,25,0	1/1:11,13:24:58.75:389,59,0	1/1:22,21:43:69.14:400,69,0	1/1:18,27:45:44.98:638,45,0	1/1:12,6:18:26.98:233,27,0	1/1:24,27:51:71.01:615,71,0	1/1:31,13:44:61.51:667,62,0	1/1:16,23:39:35.71:333,36,0	1/1:43,11:53:99:949,110,0	1/1:36,14:50:99:861,107,0	1/1:12,7:19:38.17:221,38,0	1/1:15,2:17:27.58:205,28,0	1/1:6,6:12:24.62:209,25,0	1/1:17,13:30:44.92:349,45,0	1/1:66,20:85:20.34:171,20,0	1/1:19,18:37:53.21:462,53,0	1/1:16,7:23:30.94:293,31,0	1/1:40,3:43:71.70:614,72,0	1/1:12,19:31:45.52:338,46,0	1/1:13,24:37:93.15:565,93,0	1/1:6,14:20:23.37:144,23,0	1/1:6,3:9:11.48:83,11,0
chr10	89498547	.	AC	A	681.76	PASS	AB=0.767;AC=2;AF=0.036;AN=56;BaseQRankSum=0.767;DP=1133;FS=5.427;HRun=2;HaplotypeScore=314.4157;InbreedingCoeff=-0.0378;MQ=57.46;MQ0=3;MQRankSum=-5.611;QD=6.75;ReadPosRankSum=-1.506;VQSLOD=-0.0397;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,1:52:99:0,102,1338	0/0:17,0:17:42.14:0,42,626	0/0:42,1:34:99:0,102,1413	0/0:36,5:31:22:0,22,1014	0/0:36,0:36:74.83:0,75,1076	0/0:28,0:28:63.17:0,63,914	0/0:37,2:39:38.70:0,39,934	0/1:46,21:67:99:582,0,1775	0/0:51,0:51:99:0,114,1540	0/0:55,1:56:99:0,124,2314	0/0:26,0:26:60.20:0,60,898	0/0:45,0:45:99:0,102,1478	0/0:44,0:44:99:0,120,1782	0/0:33,0:33:75.14:0,75,1026	0/0:72,0:71:99:0,189,2690	0/0:42,0:42:99:0,114,1707	0/0:20,2:22:15.30:0,15,725	0/0:24,1:25:24.30:0,24,859	0/1:24,10:32:99:188,0,857	0/0:38,0:38:81.04:0,81,1168	0/0:103,1:104:99:0,123,1741	0/0:37,0:37:75.24:0,75,1124	0/0:25,0:25:57.15:0,57,829	0/0:49,1:49:94.58:0,95,1442	0/0:37,0:37:99:0,99,1439	0/0:38,1:39:75.47:0,75,1618	0/0:14,0:14:30.06:0,30,424	0/0:15,0:15:36.12:0,36,533
chr10	89498670	.	AACACAC	A	513.99	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=7.212;DP=786;FS=10.089;HRun=0;HaplotypeScore=174.8514;InbreedingCoeff=0.7472;MQ=56.26;MQ0=46;MQRankSum=-6.064;QD=5.78;ReadPosRankSum=-5.808;VQSLOD=-0.2783;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:31:9.90:10,0,108	0/1:7,0:5:0:0,0,0	0/0:66,0:26:16.97:0,17,723	0/0:67,0:27:25.21:0,25,347	0/0:17,0:16:36.12:0,36,1169	1/1:8,17:25:43.17:406,43,0	1/1:11,9:18:17.65:223,18,0	0/0:44,0:44:99:0,102,2490	0/0:18,0:18:45.14:0,45,1239	0/0:25,0:25:63.21:0,63,1818	0/0:11,0:11:33.11:0,33,1124	0/0:31,0:31:63.21:0,63,1931	0/0:27,0:27:60.17:0,60,1865	0/0:29,0:29:66.10:0,66,1890	0/0:30,0:23:12.01:0,12,158	0/0:32,0:32:75.25:0,75,2532	0/0:32,0:23:23.69:0,24,272	0/0:23,0:23:56.89:0,57,1612	0/0:23,0:23:38.84:0,39,1279	0/0:11,0:10:27.09:0,27,668	0/0:56,0:55:99:0,117,3283	0/0:19,0:19:45.15:0,45,1280	0/0:17,0:16:30:0,30,960	0/0:45,0:44:93.04:0,93,2862	0/0:14,0:14:33.11:0,33,968	0/0:24,0:24:57.20:0,57,1722	0/0:22,0:17:26.96:0,27,680	0/0:10,0:10:30.10:0,30,936
chr10	89498689	.	A	AAC	670.61	PASS	AB=0.965;AC=13;AF=0.250;AN=52;BaseQRankSum=1.774;DP=742;FS=0.895;HRun=0;HaplotypeScore=144.7361;InbreedingCoeff=0.1421;MQ=48.67;MQ0=53;MQRankSum=-1.407;QD=2.52;ReadPosRankSum=-2.112;VQSLOD=2.3659;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:39,2:34:6.02:87,6,0	0/1:9,0:7:25.67:38,0,26	./.	./.	0/1:18,0:17:19.22:19,0,48	1/1:32,0:32:3.47:136,3,0	0/1:22,1:20:23.24:79,0,23	0/0:42,0:39:0.47:0,0,1	0/0:14,0:15:8.07:0,8,53	0/0:22,0:22:21.04:0,21,218	0/0:13,0:16:17.86:0,18,167	0/0:33,0:33:13.53:0,14,216	0/0:22,0:22:9.01:0,9,92	0/0:19,0:20:6.32:0,6,47	0/1:23,3:19:23.20:79,0,23	0/0:34,0:35:8.85:0,9,78	0/1:33,4:27:99:252,0,133	0/1:17,0:18:23.12:23,0,154	0/1:29,0:29:4.73:11,0,5	0/0:15,0:18:4.94:0,5,21	0/0:56,0:51:24.22:0,24,243	0/0:20,0:19:8.99:0,9,85	0/0:16,0:15:3.01:0,3,32	0/0:45,0:44:39.15:0,39,400	0/0:14,0:14:15.03:0,15,153	1/1:31,0:29:9.94:94,10,0	0/0:18,0:13:8.36:0,8,40	0/0:8,0:8:9.02:0,9,97
chr10	89498703	.	C	CCAA	1002.10	PASS	AB=0.806;AC=3;AF=0.054;AN=56;BaseQRankSum=5.395;DP=738;FS=9.195;HRun=0;HaplotypeScore=146.9567;InbreedingCoeff=-0.0660;MQ=44.91;MQ0=42;MQRankSum=-7.282;QD=13.01;ReadPosRankSum=-7.463;VQSLOD=0.7499;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:39:30.08:0,30,447	0/0:9,0:8:14.37:0,14,239	0/0:25,0:4:11.90:0,12,157	0/0:31,0:9:24:0,24,311	0/0:18,0:18:31.57:0,32,570	0/0:34,0:33:7.41:0,7,400	0/0:22,0:19:13.31:0,13,252	0/1:24,0:34:99:610,0,736	0/0:19,0:19:45.11:0,45,744	0/0:24,0:23:66.32:0,66,1155	0/0:16,0:16:39.13:0,39,695	0/0:33,0:32:76.46:0,76,1287	0/0:27,0:27:69.17:0,69,1191	0/0:20,0:19:37.72:0,38,562	0/0:33,0:30:40.31:0,40,654	0/0:32,0:32:66.69:0,67,1178	0/0:39,0:29:68.54:0,69,1041	0/0:25,0:25:64.29:0,64,966	0/1:12,8:21:99:347,0,351	0/1:12,5:18:99:145,0,160	0/0:57,0:53:99:0,106,1767	0/0:20,0:18:25.75:0,26,493	0/0:15,0:15:27.08:0,27,462	0/0:42,0:41:74.22:0,74,1250	0/0:18,0:18:37.84:0,38,665	0/0:32,0:29:72.45:0,72,1282	0/0:11,0:9:7.17:0,7,64	0/0:9,0:9:27.07:0,27,463
chr10	89499256	.	TCC	T	1001.75	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-0.259;DP=393;FS=15.016;HRun=2;HaplotypeScore=51.5231;InbreedingCoeff=0.8859;MQ=71.74;MQ0=30;MQRankSum=-0.941;QD=25.04;ReadPosRankSum=-2.013;VQSLOD=0.5082;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:27.96:0,28,246	1/1:5,0:4:12.03:167,12,0	0/0:45,0:17:9.73:0,10,420	0/0:49,0:15:0.25:0,0,173	0/0:9,0:9:15.02:0,15,169	1/1:8,0:6:17.73:214,18,0	1/1:3,6:7:9.91:116,10,0	0/0:10,0:10:30.09:0,30,389	0/0:12,0:11:33.11:0,33,439	0/0:23,0:22:51:0,51,763	0/0:10,0:10:11.59:0,12,213	0/0:11,0:8:24.06:0,24,295	0/0:15,0:12:26.22:0,26,370	0/0:13,0:12:36.10:0,36,453	1/1:7,0:7:21.03:252,21,0	0/0:11,0:11:22.27:0,22,279	1/1:11,0:10:30.10:420,30,0	0/0:14,0:11:25.66:0,26,387	0/0:14,0:11:36.11:0,36,496	0/0:10,0:10:30.10:0,30,386	0/0:12,0:12:27.07:0,27,337	0/0:11,0:11:29.80:0,30,331	0/0:15,0:15:29.78:0,30,449	0/0:10,0:8:18:0,18,207	0/0:7,0:6:18.06:0,18,227	0/0:24,0:22:44.12:0,44,706	0/0:6,0:6:18.06:0,18,232	0/0:5,0:4:12.04:0,12,176
chr10	89499374	.	GC	G	855.35	PASS	AC=4;AF=0.105;AN=38;BaseQRankSum=4.741;DP=280;FS=0.000;HRun=4;HaplotypeScore=60.2279;InbreedingCoeff=0.8218;MQ=72.58;MQ0=6;MQRankSum=0.484;QD=28.51;ReadPosRankSum=0.362;VQSLOD=3.2184;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:57.18:0,57,779	0/0:4,0:4:9.03:0,9,126	0/0:14,0:12:31.87:0,32,374	0/0:16,1:14:15.87:0,16,367	./.	1/1:0,11:11:33.10:392,33,0	1/1:1,18:18:48.15:576,48,0	0/0:2,0:2:0:0,0,0	./.	0/0:24,0:24:63.17:0,63,860	0/0:10,0:10:21.07:0,21,293	0/0:1,0:1:1.82:0,2,5	0/0:20,0:20:54.18:0,54,748	./.	0/0:19,0:19:54.18:0,54,755	0/0:13,0:13:36.12:0,36,498	0/0:23,0:23:63.21:0,63,881	0/0:16,0:15:42.14:0,42,588	./.	./.	./.	./.	0/0:11,0:11:27.08:0,27,354	0/0:23,0:22:63.20:0,63,865	./.	0/0:21,0:20:51.17:0,51,702	./.	0/0:4,0:4:12.04:0,12,168
chr10	89499469	.	TCTGG	T	9842.27	PASS	AB=0.987;AC=39;AF=0.696;AN=56;BaseQRankSum=-2.533;DP=612;FS=1.659;HRun=0;HaplotypeScore=183.8483;InbreedingCoeff=0.4168;MQ=59.23;MQ0=2;MQRankSum=-8.051;QD=20.38;ReadPosRankSum=-0.039;VQSLOD=4.1598;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:44:42.59:43,0,1630	1/1:1,0:3:6.02:68,6,0	0/0:18,0:16:35.94:0,36,531	0/1:19,0:19:3.32:3,0,471	1/1:0,18:18:17.16:358,17,0	1/1:1,0:17:30.09:363,30,0	1/1:2,0:31:33.07:466,33,0	1/1:0,0:14:27:431,27,0	1/1:1,22:23:60.21:1168,60,0	0/0:16,0:16:15.81:0,16,588	0/1:15,0:15:64.33:64,0,331	1/1:4,29:32:78.27:1541,78,0	0/1:21,0:21:36.80:37,0,777	1/1:2,35:36:87.26:1686,87,0	1/1:0,0:17:27.08:315,27,0	0/0:22,0:22:60.19:0,60,994	1/1:0,0:31:27.08:305,27,0	0/1:17,0:17:19.94:20,0,562	1/1:6,0:11:12.04:187,12,0	1/1:1,0:18:24.07:297,24,0	1/1:2,39:40:51.16:1015,51,0	1/1:0,17:17:20.99:355,21,0	0/1:9,1:10:53.54:54,0,346	0/0:36,1:37:8.35:0,8,1456	1/1:0,14:14:33.11:656,33,0	0/0:36,0:36:29.39:0,29,1291	1/1:0,0:18:33.10:401,33,0	0/1:13,0:13:9.87:10,0,505
chr10	89500059	.	CA	C	6975.92	PASS	AB=0.833;AC=34;AF=0.607;AN=56;BaseQRankSum=10.945;DP=692;FS=0.000;HRun=11;HaplotypeScore=82.8891;InbreedingCoeff=0.8519;MQ=72.53;MQ0=1;MQRankSum=0.241;QD=14.81;ReadPosRankSum=2.256;VQSLOD=5.3295;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,47:53:99:1108,135,0	1/1:1,5:6:17.97:146,18,0	0/0:9,0:9:17.07:0,17,164	0/1:20,0:20:15.37:15,0,242	1/1:3,18:21:44.92:369,45,0	1/1:4,15:19:44.94:369,45,0	1/1:3,27:30:74.91:616,75,0	1/1:7,0:36:53.19:154,53,0	1/1:4,17:21:47.93:394,48,0	0/0:22,1:24:23.46:0,23,443	0/0:22,0:22:48.11:0,48,506	1/1:2,28:30:74.91:616,75,0	0/0:19,0:22:47.98:0,48,488	1/1:1,27:28:65.92:542,66,0	1/1:7,28:35:77.90:640,78,0	0/0:29,1:30:47.47:0,47,678	1/1:3,32:35:77.89:640,78,0	0/0:21,0:21:54.10:0,54,565	1/1:0,0:20:39.59:113,40,0	1/1:1,0:27:42.75:124,43,0	1/1:6,17:23:44.94:369,45,0	1/1:9,22:32:67.90:548,68,0	0/0:20,0:20:42.98:0,43,443	0/0:32,1:33:62.41:0,62,823	0/1:7,7:14:14.02:105,0,14	0/0:32,0:32:44.53:0,45,674	1/1:1,0:20:36.66:106,37,0	0/0:8,0:8:24.05:0,24,250
chr10	89500517	.	CA	C	149.46	PASS	AB=0.906;AC=12;AF=0.214;AN=56;BaseQRankSum=1.277;DP=527;FS=188.642;HRun=1;HaplotypeScore=262.9663;InbreedingCoeff=-0.0945;MQ=66.00;MQ0=0;MQRankSum=-3.680;QD=0.70;ReadPosRankSum=5.639;VQSLOD=-0.2254;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,3:34:17.74:18,0,88	0/1:8,0:8:10.68:11,0,29	0/0:14,0:14:30.13:0,30,270	0/0:17,0:15:30.70:0,31,188	0/1:11,2:13:16.42:16,0,36	0/0:14,2:16:6.99:0,7,74	0/0:19,0:19:13.64:0,14,64	0/0:30,3:33:20.38:0,20,214	0/1:28,2:30:7.56:8,0,55	0/0:20,0:20:9.27:0,9,153	0/0:11,0:11:9.93:0,10,56	0/1:20,2:22:23.83:24,0,72	1/1:14,3:17:9.91:66,10,0	0/1:24,1:25:31.71:32,0,44	0/0:25,0:25:20.37:0,20,123	0/0:30,0:30:23.94:0,24,79	0/0:16,0:16:18.93:0,19,83	0/0:17,0:17:35.61:0,36,164	0/0:12,1:13:1.17:0,1,28	0/0:16,1:17:10.69:0,11,79	0/0:27,1:28:1.18:0,1,79	0/1:17,3:20:43.06:43,0,75	0/1:10,2:12:6.77:7,0,23	0/0:8,0:8:7:0,7,34	0/1:11,3:14:5.85:59,0,6	0/0:19,3:22:6.31:0,6,96	0/1:17,2:18:12.32:12,0,73	0/0:7,0:7:15.31:0,15,97
chr10	89500522	.	CCGG	C	19735.17	PASS	AB=0.867;AC=54;AF=0.964;AN=56;BaseQRankSum=-2.042;DP=474;FS=10.626;HRun=0;HaplotypeScore=199.0278;InbreedingCoeff=-0.0405;MQ=65.53;MQ0=0;MQRankSum=-5.664;QD=41.64;ReadPosRankSum=2.952;VQSLOD=5.1161;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,24:31:78.03:1210,78,0	1/1:1,5:7:21.07:355,21,0	0/1:10,1:11:24.68:25,0,358	0/1:13,4:16:49.94:256,0,50	1/1:2,7:9:12.04:170,12,0	1/1:3,11:14:42.14:724,42,0	1/1:0,17:17:51.17:897,51,0	1/1:7,23:31:80.46:1315,80,0	1/1:3,25:28:81.26:1387,81,0	1/1:2,13:15:39.13:663,39,0	1/1:1,9:10:15.05:240,15,0	1/1:3,17:20:60.18:989,60,0	1/1:3,14:17:51.17:868,51,0	1/1:6,19:25:69.16:1111,69,0	1/1:4,20:24:69.22:1138,69,0	1/1:0,28:28:84.29:1476,84,0	1/1:0,13:13:33.11:575,33,0	1/1:3,12:15:39.13:684,39,0	1/1:3,12:15:42.13:655,42,0	1/1:1,12:13:36.12:563,36,0	1/1:3,19:22:37.06:524,37,0	1/1:6,11:17:45.13:676,45,0	1/1:4,7:11:25.30:313,25,0	1/1:0,7:7:15.05:245,15,0	1/1:6,9:15:45.01:697,45,0	1/1:6,16:22:63.16:989,63,0	1/1:3,13:17:51.17:885,51,0	1/1:0,2:2:6.02:106,6,0
chr10	89500523	.	CGG	C	7638	PASS	AB=0.975;AC=54;AF=0.964;AN=56;BaseQRankSum=-0.720;DP=466;FS=7.574;HRun=3;HaplotypeScore=232.2869;InbreedingCoeff=0.1187;MQ=66.63;MQ0=0;MQRankSum=-4.874;QD=16.39;ReadPosRankSum=2.427;VQSLOD=1.8418;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,4:30:70.27:468,70,0	1/1:7,0:7:20.67:147,21,0	0/1:11,0:11:5.86:6,0,232	0/1:16,1:17:44.76:143,0,45	1/1:8,1:9:10.44:63,10,0	1/1:12,2:14:40.39:272,40,0	1/1:17,0:17:50.34:333,50,0	1/1:27,2:29:73.30:477,73,0	1/1:26,2:28:79.96:544,80,0	1/1:14,1:15:38.51:255,39,0	1/1:9,0:9:14.68:91,15,0	1/1:18,2:20:59.10:408,59,0	1/1:14,3:17:50.31:334,50,0	1/1:23,1:24:64.08:441,64,0	1/1:23,0:23:64.72:433,65,0	1/1:28,0:28:82.92:547,83,0	1/1:13,0:13:32.58:217,33,0	1/1:15,0:15:38.48:258,38,0	1/1:13,2:15:41.45:297,41,0	1/1:12,1:13:30.90:171,31,0	1/1:21,1:22:29.14:151,29,0	1/1:12,4:16:38.89:251,39,0	1/1:8,2:10:23.66:171,24,0	1/1:7,0:7:13.38:82,13,0	1/1:12,2:15:44.36:310,44,0	1/1:17,3:20:59.12:388,59,0	1/1:16,2:17:49.92:339,50,0	1/1:2,0:2:5.93:39,6,0
chr10	89500524	.	GGGT	G	13310.94	PASS	AB=1.000;AC=54;AF=0.964;AN=56;BaseQRankSum=-2.231;DP=467;FS=6.570;HRun=0;HaplotypeScore=219.7224;InbreedingCoeff=0.0119;MQ=64.68;MQ0=0;MQRankSum=-5.636;QD=28.50;ReadPosRankSum=2.820;VQSLOD=4.0309;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:68.78:738,69,0	1/1:7,0:7:21.06:260,21,0	0/1:9,0:9:11.46:11,0,291	0/1:19,0:17:66.38:121,0,66	1/1:8,1:9:10.58:123,11,0	1/1:14,0:14:40.45:402,40,0	1/1:17,0:17:51.06:588,51,0	1/1:26,2:28:75.19:859,75,0	1/1:29,0:29:84.17:1043,84,0	1/1:14,1:15:39.12:482,39,0	1/1:9,0:9:14.90:141,15,0	1/1:21,0:21:63.17:795,63,0	1/1:17,0:17:51.16:640,51,0	1/1:24,0:24:62.92:735,63,0	1/1:24,0:24:68.71:790,69,0	1/1:28,0:28:84.26:1020,84,0	1/1:13,0:13:32.90:346,33,0	1/1:14,1:15:38.61:399,39,0	1/1:16,0:16:45.12:551,45,0	1/1:13,0:13:31.33:298,31,0	1/1:23,0:23:34.55:263,35,0	1/1:15,1:16:39.63:448,40,0	1/1:11,0:11:23.85:269,24,0	1/1:7,0:7:13.59:149,14,0	1/1:14,1:15:43.83:502,44,0	1/1:20,0:20:60.18:735,60,0	1/1:18,0:17:50.85:531,51,0	1/1:2,0:2:6.02:73,6,0
chr10	89500531	.	CT	C	4811.52	PASS	AB=0.977;AC=49;AF=0.875;AN=56;BaseQRankSum=7.466;DP=496;FS=9.441;HRun=1;HaplotypeScore=231.0680;InbreedingCoeff=-0.0979;MQ=64.73;MQ0=0;MQRankSum=-5.721;QD=9.70;ReadPosRankSum=7.569;VQSLOD=1.9438;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:12.50:210,12,0	1/1:10,0:10:19.82:100,20,0	0/1:10,0:10:7.77:8,0,137	0/1:14,2:15:36.35:41,0,36	0/1:12,0:12:21.29:23,0,21	1/1:13,0:13:28.73:154,29,0	1/1:21,0:21:30.28:248,30,0	1/1:29,0:29:25.10:256,25,0	1/1:29,0:29:78.40:425,78,0	1/1:15,0:15:33.50:166,33,0	1/1:8,0:8:11.91:49,12,0	1/1:23,0:23:38.13:281,38,0	1/1:18,0:18:49.34:296,49,0	1/1:24,0:24:32.99:283,33,0	1/1:23,1:24:42.51:297,43,0	1/1:28,0:28:81.37:454,81,0	1/1:16,0:16:7.36:120,7,0	1/1:15,0:15:8.64:117,9,0	0/1:19,0:19:2.77:168,0,3	1/1:14,0:14:5.48:102,5,0	0/1:24,0:24:9.21:54,0,9	1/1:17,1:18:9.60:150,10,0	1/1:11,2:13:13.74:92,14,0	1/1:9,0:9:14.44:79,14,0	0/1:17,1:18:4.86:158,0,5	1/1:22,0:22:35.03:237,35,0	1/1:14,0:13:34.56:221,35,0	0/1:4,0:4:10.99:23,0,11
chr10	89500781	.	ACTTGGC	A	4279.10	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.837;DP=674;FS=8.859;HRun=0;HaplotypeScore=143.7279;InbreedingCoeff=0.9962;MQ=74.66;MQ0=1;MQRankSum=-7.434;QD=49.76;ReadPosRankSum=-5.013;VQSLOD=3.2329;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,160,5608	0/0:9,0:9:27.09:0,27,932	0/0:12,0:12:28.06:0,28,752	0/0:18,0:19:21.58:0,22,926	0/0:22,0:22:66.21:0,66,2189	0/0:28,0:28:84.28:0,84,2861	0/0:20,0:20:54.17:0,54,1748	1/1:2,26:28:66.21:1481,66,0	0/0:29,0:29:81.28:0,81,2802	0/0:20,0:20:53.84:0,54,1743	0/0:18,0:18:51.16:0,51,1693	0/0:30,0:30:84.29:0,84,2784	0/0:29,0:29:87.30:0,87,3109	0/0:23,0:23:66.23:0,66,2361	0/0:23,0:23:69.24:0,69,2475	0/0:25,0:25:69.24:0,69,2475	0/0:34,0:34:99:0,99,3404	0/0:21,0:21:57.18:0,57,1926	1/1:1,15:16:45.14:930,45,0	1/1:3,14:17:38.86:639,39,0	0/0:37,0:36:99:0,108,3851	0/0:33,0:33:93.31:0,93,3007	0/0:14,0:14:36.12:0,36,1272	0/0:22,0:22:57.20:0,57,2018	0/0:26,0:26:75.25:0,75,2581	0/0:34,0:34:99:0,99,3468	1/1:2,23:25:57.11:1230,57,0	0/0:6,0:6:18.06:0,18,649
chr10	89501326	.	CT	C	860.68	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=3.188;DP=574;FS=17.166;HRun=9;HaplotypeScore=65.2963;InbreedingCoeff=0.4641;MQ=64.45;MQ0=0;MQRankSum=1.516;QD=9.67;ReadPosRankSum=-1.937;VQSLOD=0.3969;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:69.14:0,69,779	0/0:10,0:10:30.09:0,30,346	0/0:10,0:7:3.81:0,4,44	0/1:5,0:5:0.32:0,0,20	0/0:20,0:20:46.03:0,46,245	1/1:1,18:19:48.02:439,48,0	1/1:3,20:23:54.02:494,54,0	0/0:34,0:34:90.25:0,90,1022	0/0:21,0:21:49.73:0,50,313	0/0:22,1:23:35.71:0,36,657	0/0:21,0:21:57.16:0,57,649	0/1:25,0:25:29.34:29,0,198	0/0:19,0:19:42.09:0,42,463	0/0:24,0:24:38:0,38,264	0/0:22,0:22:54.16:0,54,622	0/0:16,0:16:48.14:0,48,554	0/0:30,0:30:72.21:0,72,831	0/0:23,0:23:63.14:0,63,708	0/0:27,0:27:66.19:0,66,753	0/0:29,0:29:75.20:0,75,845	0/0:14,0:14:7.08:0,7,108	0/1:17,0:17:32.21:32,0,129	0/0:16,1:17:17.64:0,18,439	0/0:18,0:18:45.12:0,45,509	0/0:20,0:20:48.65:0,49,258	0/0:31,0:31:72.21:0,72,821	0/0:21,2:23:2.22:0,2,523	0/0:4,0:4:9.03:0,9,104
chr10	89501521	.	T	TTTTTTTTTTTTTG	6834.63	PASS	AB=0.957;AC=19;AF=0.339;AN=56;BaseQRankSum=8.215;DP=541;FS=37.142;HRun=0;HaplotypeScore=165.5831;InbreedingCoeff=-0.0400;MQ=45.64;MQ0=70;MQRankSum=-7.083;QD=20.52;ReadPosRankSum=0.859;VQSLOD=2.5866;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:18:21.03:889,0,21	1/1:9,0:9:17.99:581,18,0	0/1:31,0:3:5.10:5,0,7	0/1:25,0:4:1.59:2,0,23	0/1:19,3:28:12.21:161,0,12	0/0:21,0:12:24:0,24,329	0/0:25,0:20:50.53:0,51,633	0/1:34,0:25:70.16:243,0,70	1/1:16,0:13:20.90:601,21,0	0/0:14,0:12:26.99:0,27,292	0/0:14,0:14:26.52:0,27,240	0/1:20,0:17:20.80:754,0,21	0/0:14,0:14:27.41:0,27,340	0/1:9,0:13:37.30:312,0,37	0/1:15,0:11:30.76:230,0,31	0/0:24,0:23:48.66:0,49,460	0/1:27,0:23:51.47:557,0,51	0/0:24,0:20:1.96:0,2,383	0/1:22,0:18:45.27:757,0,45	0/1:19,0:15:22.77:435,0,23	0/0:8,0:3:2.68:0,3,11	0/1:7,0:5:7.65:208,0,8	0/0:13,0:9:23.31:0,23,167	0/0:17,0:15:26.96:0,27,294	1/1:8,0:5:3.01:150,3,0	0/0:23,0:22:41.91:0,42,399	0/1:33,0:28:70.99:948,0,71	0/0:11,0:10:20.73:0,21,256
chr10	89501529	.	T	TTTTTTGTTTTTTTG	10212.36	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=5.566;DP=554;FS=1.423;HRun=0;HaplotypeScore=186.4484;InbreedingCoeff=0.4643;MQ=49.56;MQ0=66;MQRankSum=-9.079;QD=34.39;ReadPosRankSum=8.340;VQSLOD=3.5159;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:18:17.96:1137,18,0	1/1:9,0:9:6.39:430,6,0	0/0:35,0:5:10.48:0,10,77	0/0:28,0:6:7.05:0,7,36	1/1:27,0:26:9.21:1044,9,0	0/0:21,0:12:30.01:0,30,461	0/0:24,0:19:56.91:0,57,883	0/1:33,0:24:17.20:884,0,17	1/1:17,0:14:16.60:790,17,0	0/0:13,0:11:28.30:0,28,452	0/0:13,0:13:30.08:0,30,457	1/1:21,0:18:24.33:1067,24,0	0/0:15,0:15:26.90:0,27,474	1/1:15,0:14:17.06:525,17,0	0/1:15,0:11:70.62:275,0,71	0/0:25,0:24:58.86:0,59,751	0/1:30,0:26:99:411,0,122	0/0:21,0:18:28.64:0,29,518	0/1:22,0:19:99:949,0,121	0/1:17,0:14:37.40:642,0,37	1/1:7,0:3:2.96:81,3,0	1/1:8,0:6:10.46:280,10,0	0/0:13,0:9:23.54:0,24,310	0/0:17,0:15:30.01:0,30,431	1/1:6,3:18:4.33:313,4,0	0/0:19,0:18:42.09:0,42,557	0/1:32,0:27:99:1384,0,115	0/0:13,0:13:35.95:0,36,443
chr10	89501818	.	TA	T	1890.47	PASS	AB=0.941;AC=16;AF=0.286;AN=56;BaseQRankSum=13.137;DP=526;FS=5.147;HRun=12;HaplotypeScore=84.0987;InbreedingCoeff=0.7574;MQ=67.06;MQ0=1;MQRankSum=-1.856;QD=12.52;ReadPosRankSum=2.104;VQSLOD=3.8487;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:28:42.85:0,43,595	0/0:11,1:12:0.80:0,1,185	0/1:13,2:14:16.90:17,0,181	0/1:11,0:12:5.29:5,0,55	1/1:3,32:35:78.49:549,78,0	0/0:2,0:18:31.40:0,31,167	0/0:2,0:13:17.04:0,17,86	0/0:7,0:18:29.56:0,30,153	1/1:3,11:14:32.87:254,33,0	0/0:30,2:32:27.18:0,27,588	0/0:8,0:8:9.01:0,9,86	1/1:3,10:13:29.48:219,29,0	0/0:24,2:26:7.61:0,8,421	1/1:5,18:23:53.46:403,53,0	0/0:20,0:20:45.06:0,45,442	0/0:24,1:25:39.88:0,40,580	0/0:27,0:27:65.94:0,66,637	0/0:20,1:21:24.84:0,25,426	0/0:7,0:20:43.43:0,43,269	0/0:3,0:15:22.16:0,22,139	1/1:7,9:16:30.99:217,31,0	1/1:0,8:8:23.86:180,24,0	0/0:13,0:12:30.06:0,30,305	0/0:27,0:26:47.79:0,48,608	1/1:1,14:14:32.56:242,33,0	0/0:18,2:21:8.13:0,8,383	0/0:9,0:21:23.05:0,23,142	0/0:8,0:8:5.68:0,6,147
chr10	89503438	.	CTT	C	1001.32	PASS	AB=0.725;AC=14;AF=0.250;AN=56;BaseQRankSum=1.375;DP=479;FS=7.647;HRun=14;HaplotypeScore=67.6845;InbreedingCoeff=0.6857;MQ=64.94;MQ0=9;MQRankSum=2.323;QD=8.08;ReadPosRankSum=3.769;VQSLOD=0.6895;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:24:35.82:0,36,333	0/0:3,0:5:12.01:0,12,122	0/0:16,0:7:3:0,3,25	0/0:14,0:8:11.80:0,12,97	1/1:7,16:23:4.51:253,5,0	0/0:23,1:26:34.80:0,35,671	0/0:22,0:24:38.62:0,39,513	0/0:20,0:32:43.63:0,44,376	1/1:5,15:21:20.81:241,21,0	0/0:15,0:15:17.51:0,18,279	0/0:13,2:12:0.22:0,0,216	1/1:7,10:19:20.52:220,21,0	0/0:5,0:5:6.01:0,6,67	1/1:9,2:11:7.63:60,8,0	0/0:22,0:23:47.98:0,48,480	0/1:7,1:9:18.73:19,0,185	0/0:9,0:22:30.46:0,30,265	0/0:11,0:13:31.37:0,31,303	0/0:6,0:18:34.91:0,35,315	0/0:5,0:14:23.93:0,24,219	0/1:5,6:12:5.20:81,0,5	1/1:5,11:16:20.94:194,21,0	0/0:18,0:18:41.38:0,41,479	0/0:19,0:19:42:0,42,500	1/1:7,4:11:11.91:111,12,0	0/0:20,0:21:41.76:0,42,602	0/0:11,0:12:18.27:0,18,157	0/0:9,0:10:20.52:0,21,212
chr10	89503739	.	TCCA	T	609.84	PASS	AB=0.962;AC=13;AF=0.232;AN=56;BaseQRankSum=7.064;DP=1011;FS=16.484;HRun=0;HaplotypeScore=241.7128;InbreedingCoeff=-0.1691;MQ=46.86;MQ0=55;MQRankSum=-7.106;QD=1.41;ReadPosRankSum=-5.089;VQSLOD=0.2313;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:54,5:34:99:140,0,302	0/1:18,0:14:59.84:60,0,338	0/0:31,0:16:41.58:0,42,554	0/1:36,2:26:25.02:25,0,739	0/0:15,5:20:30.06:0,30,691	0/1:35,1:27:84.33:84,0,687	0/0:70,0:57:60.01:0,60,1981	0/1:51,0:27:99:102,0,722	0/0:26,1:22:3.41:0,3,946	0/0:34,0:31:63.28:0,63,1642	0/0:12,0:12:30.10:0,30,571	0/0:30,1:28:18.51:0,19,1312	0/0:29,1:27:74.78:0,75,1441	0/1:31,3:32:21.12:21,0,1548	0/1:62,2:54:69.24:69,0,1206	0/0:58,0:56:99:0,156,3077	0/1:31,1:29:99:136,0,528	0/0:31,0:30:62.10:0,62,1618	0/1:35,1:19:20.13:20,0,436	0/0:16,1:14:19.92:0,20,381	0/0:93,11:85:32.20:0,32,2302	0/1:18,1:16:2.21:2,0,855	0/0:18,1:19:16.13:0,16,784	0/0:50,0:47:99:0,127,2584	0/1:19,1:19:5.61:6,0,712	0/0:33,1:33:24.03:0,24,1618	1/1:24,1:17:1.55:90,2,0	0/0:11,0:11:5.10:0,5,484
chr10	89503809	.	ATCC	A	672.96	PASS	AB=0.973;AC=10;AF=0.179;AN=56;BaseQRankSum=8.136;DP=1404;FS=13.614;HRun=0;HaplotypeScore=292.3740;InbreedingCoeff=0.0280;MQ=43.22;MQ0=293;MQRankSum=-6.195;QD=1.70;ReadPosRankSum=-1.204;VQSLOD=0.8362;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:50,3:24:64.93:65,0,378	0/0:12,0:9:14.04:0,14,169	0/1:56,0:7:9.68:10,0,11	0/1:72,0:11:28.53:29,0,79	0/1:20,0:18:12.43:12,0,223	0/1:31,0:20:86.45:86,0,313	0/0:63,0:52:99:0,109,1854	0/0:93,0:17:48.15:0,48,716	0/0:33,0:24:47.33:0,47,488	0/1:66,2:48:0.21:0,0,1854	0/0:27,0:22:43.14:0,43,917	0/0:46,0:38:49.33:0,49,1095	0/0:67,1:53:80.42:0,80,2262	0/0:46,0:38:75.26:0,75,1184	0/1:43,5:39:99:250,0,398	0/0:65,1:53:35.72:0,36,2372	1/1:13,8:20:19.12:340,19,0	0/0:49,1:48:54.37:0,54,1786	0/0:78,1:23:0.63:0,1,663	0/0:59,1:35:50.80:0,51,775	0/0:119,4:86:99:0,105,1749	0/1:23,1:23:22.75:23,0,278	0/0:26,0:20:3.47:0,3,798	0/0:78,2:70:46.84:0,47,2523	0/0:23,0:19:28.99:0,29,427	0/0:66,0:54:99:0,155,2710	0/0:37,0:28:15.89:0,16,845	0/0:11,0:9:18.04:0,18,335
chr10	89503859	.	ATCC	A	4205.10	PASS	AB=0.879;AC=23;AF=0.442;AN=52;BaseQRankSum=3.546;DP=1590;FS=73.733;HRun=0;HaplotypeScore=284.8997;InbreedingCoeff=-0.8151;MQ=32.66;MQ0=396;MQRankSum=-3.786;QD=3.54;ReadPosRankSum=0.632;VQSLOD=-0.5353;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,6:21:99:101,0,209	0/1:11,1:6:31.58:54,0,32	./.	./.	0/0:21,0:14:20.88:0,21,289	0/1:22,3:16:92.82:93,0,223	0/1:59,8:56:99:218,0,911	0/0:133,1:27:27.35:0,27,642	0/1:40,1:32:18.42:18,0,758	0/1:68,27:60:99:770,0,1144	0/1:16,1:9:29.65:30,0,181	0/1:54,3:40:99:141,0,933	0/1:51,28:64:99:136,0,1114	0/1:47,3:39:99:148,0,692	0/1:46,5:44:99:118,0,312	0/1:57,7:51:99:229,0,1555	0/1:23,9:29:99:275,0,165	0/1:38,16:52:99:205,0,1081	0/0:93,1:20:1.12:0,1,605	0/1:67,1:35:95.67:96,0,688	0/1:97,3:65:10.89:11,0,855	0/1:27,3:25:99:185,0,346	0/1:21,5:19:99:260,0,172	0/1:51,40:79:99:223,0,842	0/1:23,1:18:99:111,0,288	0/1:72,17:57:99:592,0,1446	0/1:48,1:39:27.19:27,0,940	0/1:15,7:17:99:164,0,176
chr10	89503879	.	C	CTCCA	1213.42	PASS	AB=0.955;AC=13;AF=0.250;AN=52;BaseQRankSum=5.098;DP=1536;FS=17.887;HRun=0;HaplotypeScore=325.9244;InbreedingCoeff=-0.3296;MQ=32.66;MQ0=308;MQRankSum=-6.497;QD=2.06;ReadPosRankSum=-0.632;VQSLOD=0.7455;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:58,0:29:38.51:39,0,294	0/1:23,0:11:42:42,0,140	./.	./.	0/0:20,0:17:15.05:0,15,250	0/1:31,0:19:78.16:78,0,477	0/1:69,0:53:99:120,0,1144	0/0:115,0:41:70.13:0,70,1150	0/0:43,0:33:18.67:0,19,866	0/0:82,0:52:29.96:0,30,1470	0/1:10,0:6:11.53:12,0,79	0/0:46,0:36:3.57:0,4,848	0/0:67,0:55:11.01:0,11,905	0/1:38,0:35:4.78:5,0,985	0/1:53,26:77:65.80:66,0,1020	0/1:58,0:47:74.71:75,0,1319	0/1:31,4:35:99:777,0,444	0/0:49,0:46:74.98:0,75,1157	0/0:98,0:24:60.08:0,60,996	0/0:52,0:34:57.81:0,58,954	0/1:85,0:52:13.09:13,0,893	0/1:36,0:29:99:112,0,424	0/1:26,0:18:10.40:10,0,292	0/0:76,0:67:78.94:0,79,1086	0/1:25,0:19:9.35:9,0,289	0/0:82,0:61:99:0,154,2234	0/0:49,0:35:71.64:0,72,1202	0/0:19,0:17:17.43:0,17,286
chr10	89503913	.	ATCC	A	1394.30	PASS	AB=0.905;AC=14;AF=0.250;AN=56;BaseQRankSum=5.358;DP=1146;FS=1.490;HRun=0;HaplotypeScore=218.8095;InbreedingCoeff=-0.3431;MQ=31.10;MQ0=245;MQRankSum=-3.393;QD=2.31;ReadPosRankSum=-1.811;VQSLOD=2.5073;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:21:15.58:16,0,337	0/0:20,0:11:21.82:0,22,296	0/1:40,7:10:99:126,0,152	0/1:57,3:12:88.81:89,0,264	0/0:11,2:7:3.68:0,4,67	0/1:27,1:17:35.80:36,0,387	0/1:69,5:59:99:183,0,584	0/0:105,2:34:23.91:0,24,1221	0/1:25,2:20:15.48:15,0,346	0/0:32,0:19:48.16:0,48,941	0/0:8,0:7:11.78:0,12,209	0/1:29,10:34:99:453,0,276	0/0:32,0:28:39.50:0,39,715	0/1:21,4:21:99:142,0,542	0/0:80,1:73:55.67:0,56,1285	0/0:38,0:28:61.45:0,61,1123	0/0:40,0:36:56.54:0,57,983	0/0:39,0:39:68.16:0,68,1578	0/1:80,2:21:99:145,0,657	0/1:55,0:23:25.05:25,0,238	0/1:56,5:40:27.48:27,0,191	0/1:10,6:14:99:167,0,175	0/0:17,0:12:31.35:0,31,647	0/0:60,0:54:68.54:0,69,1506	0/1:10,2:6:17.09:17,0,38	0/0:47,0:30:24.44:0,24,1010	0/1:33,6:28:99:107,0,534	0/0:9,0:8:21.07:0,21,459
chr10	89503940	.	ATCCT	A	2171.07	PASS	AB=0.917;AC=15;AF=0.268;AN=56;BaseQRankSum=8.876;DP=1103;FS=31.290;HRun=0;HaplotypeScore=234.6544;InbreedingCoeff=-0.3640;MQ=41.37;MQ0=142;MQRankSum=-7.557;QD=3.84;ReadPosRankSum=-1.685;VQSLOD=1.3181;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:22:45.91:46,0,240	0/1:15,1:13:77.66:78,0,88	0/0:52,0:24:52.68:0,53,1196	0/0:62,0:32:49.09:0,49,1303	0/0:24,1:18:23.42:0,23,458	0/1:28,0:19:24.88:25,0,326	0/1:54,0:42:10.18:10,0,1560	0/0:85,1:34:36.02:0,36,1961	0/1:16,2:18:99:124,0,314	0/0:40,0:29:84.25:0,84,1998	0/0:16,0:12:36.04:0,36,854	0/1:29,6:33:99:335,0,450	0/0:37,0:35:79.71:0,80,2207	0/1:24,2:30:99:317,0,394	0/1:43,13:52:99:661,0,836	0/0:46,0:41:99:0,109,2551	0/1:26,4:27:99:156,0,719	0/0:30,0:33:39.12:0,39,1648	0/1:60,2:33:88.74:89,0,1600	0/1:45,7:25:99:101,0,322	0/1:56,3:45:55.92:56,0,420	0/1:14,7:25:99:127,0,365	0/0:21,0:20:43.39:0,43,1194	0/0:57,0:55:68.38:0,68,2728	0/1:19,0:16:85.88:86,0,332	0/0:50,0:39:60.18:0,60,2444	0/1:18,5:18:99:118,0,482	0/0:6,0:5:15.05:0,15,392
chr10	89504099	.	T	TTCTC	2733.52	PASS	AB=1.000;AC=17;AF=0.315;AN=54;BaseQRankSum=-2.202;DP=703;FS=15.983;HRun=0;HaplotypeScore=155.6214;InbreedingCoeff=0.7804;MQ=66.47;MQ0=9;MQRankSum=-2.771;QD=12.43;ReadPosRankSum=-3.054;VQSLOD=1.9309;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:6:0,6,52	1/1:5,10:17:27.09:611,27,0	./.	0/0:52,0:22:5.39:0,5,57	0/0:18,0:17:8.99:0,9,76	1/1:29,0:27:9.14:135,9,0	1/1:26,0:26:6.90:63,7,0	1/1:32,0:31:12.68:185,13,0	0/0:16,0:16:11.99:0,12,102	0/0:35,0:38:51.84:0,52,889	0/0:16,0:18:32.83:0,33,426	0/0:25,0:25:26.97:0,27,227	0/0:17,0:19:20.92:0,21,284	0/0:16,0:16:3:0,3,26	1/1:20,11:32:32.78:694,33,0	0/0:15,0:16:27.08:0,27,405	1/1:7,17:26:39.11:848,39,0	0/0:25,0:25:38.48:0,38,549	1/1:16,0:20:20.38:235,20,0	0/1:16,0:16:0.19:38,0,0	0/0:32,0:32:13.82:0,14,124	0/0:28,0:28:20.98:0,21,178	0/0:24,0:24:46.35:0,46,647	0/0:25,0:26:4.27:0,4,585	0/0:24,0:22:20.98:0,21,175	0/0:30,0:32:34.80:0,35,436	1/1:12,0:17:5.47:112,5,0	0/0:11,0:11:3.10:0,3,311
chr10	89504125	.	CTCTCTG	C	2210.86	PASS	AB=0.947;AC=20;AF=0.357;AN=56;BaseQRankSum=0.941;DP=706;FS=9.591;HRun=0;HaplotypeScore=151.2254;InbreedingCoeff=0.3449;MQ=53.61;MQ0=14;MQRankSum=-0.531;QD=6.78;ReadPosRankSum=-3.501;VQSLOD=1.1342;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,35:38:8.83:155,9,0	0/0:17,0:17:16.09:0,16,771	0/0:25,0:5:11.64:0,12,76	0/0:59,0:18:16:0,16,204	0/1:4,11:14:8.17:80,0,8	0/1:19,0:16:66.19:99,0,66	0/1:23,0:23:99:178,0,126	0/1:23,0:22:99:211,0,251	0/1:22,0:22:10.48:125,0,10	0/0:41,0:41:61.31:0,61,2258	0/0:19,0:19:44.62:0,45,995	1/1:28,1:29:28.10:236,28,0	0/0:15,0:15:36.04:0,36,878	1/1:5,11:16:2.53:68,3,0	0/0:32,0:32:49.54:0,50,959	0/0:19,0:19:54.08:0,54,1233	0/0:25,0:24:41.32:0,41,1045	0/0:26,0:26:43.77:0,44,1697	0/1:20,0:19:99:178,0,259	0/1:11,0:10:35.36:35,0,137	1/1:39,2:39:59.49:658,59,0	1/1:28,1:28:22.87:249,23,0	0/0:24,0:23:63.09:0,63,1494	0/0:27,0:27:75:0,75,1867	1/1:19,0:18:19.15:81,19,0	0/0:30,0:29:78.17:0,78,1510	0/1:20,0:19:46.06:46,0,315	0/0:21,0:20:32.84:0,33,901
chr10	89504127	.	CTCTG	C	3475.47	PASS	AB=0.940;AC=21;AF=0.375;AN=56;BaseQRankSum=0.324;DP=700;FS=12.069;HRun=0;HaplotypeScore=128.7316;InbreedingCoeff=0.4225;MQ=53.67;MQ0=13;MQRankSum=-0.635;QD=10.79;ReadPosRankSum=-4.160;VQSLOD=1.3328;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:38:8.83:89,9,0	0/0:16,0:16:16.10:0,16,547	0/0:25,0:5:7.81:0,8,70	0/0:58,0:17:18.67:0,19,189	1/1:13,2:14:12.02:173,12,0	0/1:20,0:17:11.63:123,0,12	0/1:24,0:24:19.86:294,0,20	0/1:22,0:21:99:242,0,107	0/1:6,16:22:9.95:169,0,10	0/0:42,0:42:99:0,100,1751	0/0:19,0:19:44.53:0,45,707	1/1:3,25:28:29.52:486,30,0	0/0:15,0:15:36.01:0,36,656	1/1:14,1:15:2.71:35,3,0	0/0:30,0:30:34.19:0,34,708	0/0:19,0:19:54.06:0,54,962	0/0:26,0:25:43.83:0,44,769	0/0:26,0:26:44.26:0,44,1279	0/1:18,0:17:99:176,0,134	0/1:12,0:11:53.28:53,0,58	1/1:38,3:39:80.94:816,81,0	1/1:9,20:28:23.99:349,24,0	0/0:24,0:23:41.01:0,41,1093	0/0:27,0:27:74.88:0,75,1442	1/1:0,18:18:21.07:396,21,0	0/0:30,0:29:28.14:0,28,1070	0/1:20,0:19:73.73:74,0,110	0/0:21,0:20:32.47:0,32,674
chr10	89504129	.	CTG	C	2546.93	PASS	AB=0.990;AC=25;AF=0.446;AN=56;BaseQRankSum=2.525;DP=689;FS=14.577;HRun=0;HaplotypeScore=112.3904;InbreedingCoeff=0.6188;MQ=53.94;MQ0=13;MQRankSum=-0.893;QD=7.45;ReadPosRankSum=-2.737;VQSLOD=1.5172;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:36,1:37:8.77:61,9,0	0/0:16,0:16:16.08:0,16,326	0/0:26,0:6:10.72:0,11,86	0/0:55,0:18:19.55:0,20,167	1/1:15,0:14:11.96:93,12,0	1/1:19,0:16:19.26:168,19,0	1/1:25,0:25:48.52:395,49,0	0/1:20,0:19:5.93:271,0,6	0/1:18,1:19:10.05:75,0,10	0/0:41,0:41:76.79:0,77,1302	0/0:21,0:21:16.25:0,16,472	1/1:26,1:28:29.50:229,29,0	0/0:15,0:15:24.46:0,24,448	1/1:13,1:14:2.98:22,3,0	0/0:30,0:30:34.15:0,34,462	0/0:20,0:20:49.43:0,49,725	0/0:25,0:24:43.55:0,44,466	0/0:24,1:25:28.26:0,28,875	0/1:16,0:15:18.75:211,0,19	1/1:11,0:10:11.19:88,11,0	1/1:40,1:39:80.84:666,81,0	1/1:24,5:28:23.84:180,24,0	0/0:25,0:24:46.13:0,46,812	0/0:26,0:26:65.35:0,65,1016	1/1:18,0:17:20.95:167,21,0	0/1:30,0:29:8.52:9,0,745	0/1:20,0:19:11.80:120,0,12	0/0:21,0:20:19.80:0,20,511
chr10	89505156	.	GATGA	G	373.09	PASS	AB=0.835;AC=3;AF=0.054;AN=56;BaseQRankSum=5.554;DP=603;FS=34.868;HRun=0;HaplotypeScore=119.2708;InbreedingCoeff=-0.0642;MQ=68.89;MQ0=3;MQRankSum=-6.615;QD=6.55;ReadPosRankSum=-3.507;VQSLOD=-0.2098;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:20.54:0,21,369	0/0:3,0:3:9.03:0,9,200	0/0:39,0:26:43.46:0,43,1565	0/0:39,0:31:60.46:0,60,1588	0/0:19,0:19:51.14:0,51,1372	0/0:17,0:17:4.84:0,5,1136	0/0:9,0:9:27.08:0,27,719	0/0:27,0:27:78.26:0,78,2078	0/0:25,0:24:25.33:0,25,1280	0/0:13,0:13:39.13:0,39,1131	0/0:15,0:15:45.15:0,45,1285	0/0:17,0:17:41.02:0,41,895	0/0:12,0:12:33.11:0,33,924	0/0:20,0:20:28.70:0,29,1230	0/0:32,0:32:72.25:0,72,2037	0/0:22,0:22:63.22:0,63,1791	0/0:33,0:33:87.29:0,87,2438	0/0:16,0:16:45.13:0,45,1217	0/1:19,3:22:91.46:91,0,1493	0/1:12,1:14:26.49:26,0,889	0/0:22,1:23:31.65:0,32,1554	0/0:19,0:19:45.14:0,45,1174	0/0:14,0:14:38.95:0,39,1101	0/0:35,0:35:99:0,105,2920	0/0:19,0:19:20.96:0,21,1082	0/0:27,0:27:81.28:0,81,2325	0/1:14,7:21:99:355,0,1152	0/0:18,0:18:51.17:0,51,1457
chr10	89505164	.	A	AGAAGGAAAGAAGGAAG	6014.34	PASS	AB=0.798;AC=21;AF=0.375;AN=56;BaseQRankSum=3.738;DP=618;FS=49.959;HRun=0;HaplotypeScore=238.7808;InbreedingCoeff=0.4149;MQ=65.09;MQ0=4;MQRankSum=-7.513;QD=19.40;ReadPosRankSum=-3.952;VQSLOD=1.7821;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,18:37:8.99:335,9,0	0/0:1,0:1:2.99:0,3,24	0/0:29,0:20:34.12:0,34,299	0/0:36,0:24:3.56:0,4,250	0/1:16,0:16:99:125,0,180	1/1:17,0:15:38.83:596,39,0	1/1:12,0:12:30.02:375,30,0	1/1:30,0:30:58.49:615,58,0	0/1:17,0:24:99:317,0,206	0/0:14,0:14:39.09:0,39,851	0/0:14,0:14:39.03:0,39,715	0/1:9,0:17:99:166,0,163	0/0:17,0:17:44.94:0,45,873	0/1:15,0:23:99:231,0,211	0/0:17,0:29:62.20:0,62,536	0/0:22,0:22:66.10:0,66,1705	0/0:21,0:30:70.89:0,71,619	0/0:17,0:17:48:0,48,1271	1/1:23,0:23:53.81:671,54,0	1/1:13,0:13:32.84:402,33,0	0/1:27,0:27:99:268,0,373	0/1:12,0:20:99:158,0,177	0/0:16,0:16:35.24:0,35,579	0/0:34,0:34:87.03:0,87,2136	0/1:14,0:25:99:437,0,207	0/0:29,0:28:78.19:0,78,2110	1/1:25,0:25:69.01:1318,69,0	0/0:18,0:19:57.13:0,57,1655
chr10	89505409	.	C	CAA	1237.81	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.463;DP=481;FS=23.667;HRun=6;HaplotypeScore=68.8844;InbreedingCoeff=0.9226;MQ=68.83;MQ0=3;MQRankSum=-0.070;QD=32.57;ReadPosRankSum=1.848;VQSLOD=2.1586;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,100,664	1/1:0,2:3:3.01:51,3,0	0/0:9,0:6:15.02:0,15,164	0/0:22,0:19:40.04:0,40,513	0/0:14,0:14:39.12:0,39,475	0/0:20,0:20:40.18:0,40,341	0/0:7,0:7:17.57:0,18,103	0/0:32,0:30:32.78:0,33,291	0/0:22,0:22:63.16:0,63,741	0/0:14,0:14:36.09:0,36,419	0/0:12,0:12:30.09:0,30,366	0/0:11,0:11:30.09:0,30,366	0/0:17,0:17:51.13:0,51,596	0/0:16,0:16:45.14:0,45,549	1/1:1,19:17:39.13:660,39,0	0/0:22,0:22:54.15:0,54,646	1/1:1,14:15:39.13:660,39,0	0/0:17,0:17:39.11:0,39,474	0/0:21,0:19:47.25:0,47,280	0/0:8,0:8:23.70:0,24,158	0/0:14,0:14:42.13:0,42,511	0/0:9,0:9:24.07:0,24,293	0/0:10,0:10:30.09:0,30,366	0/0:17,0:17:51.13:0,51,596	0/0:24,0:24:69.21:0,69,840	0/0:21,0:21:57.16:0,57,684	0/0:26,0:26:23.26:0,23,342	0/0:22,0:22:66.21:0,66,803
chr10	89505679	.	TTTA	T	697.88	PASS	AB=0.833;AC=32;AF=0.727;AN=44;BaseQRankSum=0.216;DP=268;FS=0.000;HRun=0;HaplotypeScore=39.3093;InbreedingCoeff=0.3828;MQ=68.31;MQ0=4;MQRankSum=0.445;QD=4.98;ReadPosRankSum=-0.459;VQSLOD=1.1804;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:24:24.96:0,25,333	0/0:2,0:3:6.01:0,6,65	./.	./.	1/1:9,0:9:4.65:12,5,0	0/0:12,0:12:18.06:0,18,343	./.	./.	1/1:8,0:8:1.55:4,2,0	1/1:5,1:6:3.01:39,3,0	1/1:6,2:8:6.02:78,6,0	./.	1/1:6,3:9:9.03:118,9,0	1/1:8,0:8:1.55:4,2,0	0/1:7,1:8:30.19:30,0,105	0/0:3,0:3:3.01:0,3,57	0/0:13,0:30:39.13:0,39,528	0/1:15,6:20:44.75:69,0,45	1/1:8,1:9:3.01:39,3,0	./.	1/1:6,0:6:1.55:4,2,0	1/1:4,0:4:1.55:4,2,0	1/1:3,1:4:3.01:39,3,0	1/1:5,3:8:9.03:118,9,0	1/1:8,0:8:0.57:3,1,0	1/1:4,2:6:3.01:39,3,0	1/1:7,2:9:6.02:78,6,0	1/1:2,7:8:12.04:157,12,0
chr10	89505688	.	ATT	A	631.82	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=2.717;DP=223;FS=0.920;HRun=2;HaplotypeScore=30.1862;InbreedingCoeff=0.6590;MQ=63.51;MQ0=5;MQRankSum=1.024;QD=15.04;ReadPosRankSum=1.525;VQSLOD=0.9871;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.22:0,66,925	0/0:3,0:3:9.03:0,9,141	0/0:3,0:3:9.03:0,9,109	0/0:3,0:2:6.02:0,6,78	1/1:0,10:10:24.08:362,24,0	0/0:9,0:9:27.09:0,27,482	0/0:5,0:5:15.04:0,15,182	0/0:37,0:35:99:0,102,1300	1/1:0,6:6:3.01:49,3,0	0/0:5,0:5:11.77:0,12,155	0/0:5,0:5:8.48:0,8,116	1/1:2,0:2:6.02:92,6,0	0/0:8,0:8:14.20:0,14,193	1/1:0,7:7:3.01:49,3,0	0/0:8,0:8:20.78:0,21,290	0/0:1,0:1:3.01:0,3,61	0/0:29,0:29:72.24:0,72,1002	0/0:17,0:16:29.46:0,29,360	0/0:7,0:7:17.79:0,18,233	0/0:2,0:2:6.02:0,6,78	1/1:0,1:1:3.01:49,3,0	1/1:0,3:3:6.02:92,6,0	0/1:1,0:1:0:0,0,0	0/0:5,0:5:5.19:0,5,76	1/1:1,3:4:6.02:92,6,0	0/0:4,0:4:8.76:0,9,116	0/0:6,0:6:11.47:0,11,140	1/1:8,0:7:1.25:4,1,0
chr10	89506226	.	CG	C	1876.18	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.391;DP=691;FS=0.556;HRun=1;HaplotypeScore=74.5323;InbreedingCoeff=0.9796;MQ=82.57;MQ0=1;MQRankSum=-4.644;QD=39.09;ReadPosRankSum=2.954;VQSLOD=4.3549;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,48:48:99:1971,141,0	0/0:5,0:5:15.05:0,15,240	0/0:24,0:24:72.23:0,72,1079	0/0:15,1:16:42.13:0,42,654	0/0:27,0:27:78.22:0,78,1212	0/0:7,0:7:21.07:0,21,335	0/0:33,0:33:99:0,99,1530	0/0:24,0:24:72.24:0,72,1129	0/0:25,0:25:75.26:0,75,1195	0/0:26,0:26:72.20:0,72,1099	0/0:17,0:17:48.15:0,48,745	0/0:22,0:22:66.20:0,66,1008	0/0:21,0:21:60.20:0,60,958	0/0:17,0:17:51.16:0,51,787	0/0:21,0:21:57.19:0,57,911	0/0:21,0:21:63.20:0,63,983	0/0:38,0:38:99:0,114,1798	0/0:43,0:43:99:0,129,2061	0/0:23,0:23:66.22:0,66,1024	0/0:20,0:20:60.19:0,60,933	0/0:66,0:66:99:0,190,2940	0/0:18,0:18:51.17:0,51,801	0/0:17,0:17:48.16:0,48,761	0/0:40,0:38:99:0,114,1762	0/0:16,0:16:48.15:0,48,739	0/0:21,0:21:63.20:0,63,965	0/0:25,0:25:72.22:0,72,1124	0/0:10,0:10:27.09:0,27,431
chr10	89506475	.	GC	G	6817.78	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=10.232;DP=584;FS=1.428;HRun=6;HaplotypeScore=62.4541;InbreedingCoeff=0.9970;MQ=81.96;MQ0=0;MQRankSum=-1.195;QD=26.12;ReadPosRankSum=5.125;VQSLOD=4.9804;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,1636	1/1:0,9:9:21.05:226,21,0	0/0:24,0:24:60.16:0,60,746	0/0:21,0:21:31.17:0,31,438	1/1:2,21:23:57.09:596,57,0	1/1:0,18:18:54.14:580,54,0	1/1:1,33:34:84.21:903,84,0	0/0:21,0:21:63.19:0,63,802	1/1:2,20:22:54.14:580,54,0	0/0:23,0:23:69.21:0,69,885	0/0:12,0:12:36.12:0,36,473	1/1:2,24:26:54.13:580,54,0	0/0:17,0:17:48.16:0,48,629	1/1:2,12:14:33.08:355,33,0	1/1:0,21:21:51.13:548,51,0	0/0:31,0:31:84.26:0,84,1087	1/1:4,34:38:96.19:1032,96,0	0/0:28,0:28:78.23:0,78,1009	0/0:18,0:18:51.15:0,51,654	0/0:11,0:11:33.11:0,33,433	1/1:0,22:22:57.14:613,57,0	1/1:0,21:21:45.11:483,45,0	0/0:13,0:13:39.10:0,39,484	0/0:20,0:20:57.17:0,57,736	1/1:0,13:13:30.08:322,30,0	0/0:22,0:22:60.18:0,60,774	0/0:12,0:12:36.09:0,36,444	0/0:5,0:5:15.03:0,15,182
chr10	89507149	.	GCTCTTAA	G	4829.28	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.455;DP=491;FS=1.018;HRun=0;HaplotypeScore=129.0464;InbreedingCoeff=0.9948;MQ=57.85;MQ0=7;MQRankSum=-12.165;QD=54.26;ReadPosRankSum=1.088;VQSLOD=4.6761;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,20:25:45.62:1061,46,0	1/1:2,7:9:27.08:632,27,0	0/0:14,0:7:21.04:0,21,585	0/0:20,0:11:31.34:0,31,1069	0/0:25,0:25:75.24:0,75,2787	1/1:2,13:15:36.12:916,36,0	1/1:3,12:15:33.07:707,33,0	0/0:32,0:32:96.31:0,96,3521	0/0:24,0:24:69.22:0,69,2658	0/0:26,0:26:78.27:0,78,3118	0/0:6,0:6:18.06:0,18,665	0/0:18,0:18:54.19:0,54,2089	0/0:14,0:14:42.14:0,42,1619	0/0:12,0:11:33.10:0,33,1252	1/1:1,11:12:33.09:713,33,0	0/0:17,0:17:48.16:0,48,1895	1/1:3,10:13:33.10:799,33,0	0/0:16,0:16:45.15:0,45,1763	0/0:15,0:13:36.12:0,36,1405	0/0:10,0:10:30.10:0,30,1211	0/0:34,0:34:96.33:0,96,3748	0/0:8,0:8:24.08:0,24,973	0/0:23,0:23:66.20:0,66,2503	0/0:23,0:23:63.20:0,63,2428	0/0:13,0:13:39.13:0,39,1598	0/0:21,0:21:63.22:0,63,2483	0/0:25,0:25:75.24:0,75,2760	0/0:6,0:6:18.06:0,18,738
chr10	89507163	.	A	AC	2971.58	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.530;DP=518;FS=0.000;HRun=0;HaplotypeScore=85.2805;InbreedingCoeff=0.9964;MQ=64.36;MQ0=5;MQRankSum=-11.408;QD=30.63;ReadPosRankSum=1.280;VQSLOD=3.3417;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:40.06:603,40,0	1/1:0,7:7:21.07:324,21,0	0/0:17,0:12:33.11:0,33,459	0/0:22,0:19:37.94:0,38,665	0/0:23,0:23:66.22:0,66,923	1/1:0,17:17:42.61:652,43,0	1/1:0,15:15:33.58:512,34,0	0/0:34,0:34:99:0,99,1354	0/0:24,0:24:69.22:0,69,947	0/0:27,0:27:81.27:0,81,1133	0/0:6,0:6:18.06:0,18,252	0/0:19,0:19:54.18:0,54,755	0/0:17,0:17:48.16:0,48,670	0/0:10,0:9:27.09:0,27,378	1/1:3,13:16:28.03:417,28,0	0/0:19,0:19:57.19:0,57,797	1/1:1,13:14:42.14:651,42,0	0/0:16,0:16:48.12:0,48,647	0/0:19,0:18:54.18:0,54,751	0/0:10,0:10:30.10:0,30,420	0/0:32,0:32:90.30:0,90,1254	0/0:8,0:8:24.08:0,24,336	0/0:22,0:22:60.20:0,60,839	0/0:24,0:24:66.18:0,66,900	0/0:14,0:14:42.14:0,42,588	0/0:22,0:22:66.21:0,66,907	0/0:26,0:26:75.20:0,75,994	0/0:10,0:10:30.10:0,30,418
chr10	89507663	.	A	AGC	11595.38	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-8.564;DP=532;FS=0.349;HRun=0;HaplotypeScore=81.2561;InbreedingCoeff=0.9859;MQ=67.30;MQ0=5;MQRankSum=-0.957;QD=47.91;ReadPosRankSum=4.412;VQSLOD=6.3150;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,40:42:99:2082,108,0	1/1:1,6:6:18.06:347,18,0	0/0:13,0:8:24.08:0,24,356	0/0:27,0:21:60.11:0,60,833	0/0:10,0:10:20.48:0,20,250	1/1:1,22:23:60.21:1154,60,0	1/1:2,22:23:54.19:1040,54,0	1/1:4,16:19:54.18:1015,54,0	0/0:13,0:13:25.13:0,25,331	0/0:16,0:16:45.14:0,45,669	0/0:13,0:13:39.12:0,39,573	0/0:10,0:10:25.64:0,26,275	0/0:13,0:13:36.09:0,36,493	0/0:10,0:10:19.01:0,19,133	1/1:2,19:21:50.83:983,51,0	0/0:18,0:18:54.15:0,54,784	1/1:0,41:41:99:2314,120,0	0/0:42,0:42:99:0,120,1825	1/1:5,21:26:66.21:1213,66,0	1/1:0,12:12:30.10:579,30,0	0/0:15,0:15:27.01:0,27,373	0/0:7,0:7:9.89:0,10,264	0/0:14,0:14:39.13:0,39,595	0/0:30,0:30:84.29:0,84,1286	0/0:12,0:12:20.51:0,21,264	0/0:21,0:21:63.17:0,63,881	1/1:2,18:22:45.15:868,45,0	0/0:6,0:6:15.05:0,15,230
chr10	89507666	.	C	CGG	1145.31	PASS	AB=0.809;AC=8;AF=0.143;AN=56;BaseQRankSum=7.204;DP=532;FS=7.834;HRun=5;HaplotypeScore=118.2900;InbreedingCoeff=-0.0851;MQ=65.80;MQ0=8;MQRankSum=-7.726;QD=11.01;ReadPosRankSum=-0.313;VQSLOD=-0.1943;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:41:98.14:0,98,860	0/0:7,0:6:17.71:0,18,164	0/0:13,0:8:21.07:0,21,264	0/0:25,0:19:39.90:0,40,471	0/1:9,3:11:87.88:88,0,99	0/0:23,0:23:20.41:0,20,144	0/1:24,0:22:5.94:6,0,112	0/0:19,0:17:41.68:0,42,426	0/1:5,7:12:99:369,0,119	0/0:18,0:18:45.14:0,45,573	0/0:15,0:15:39.11:0,39,483	0/1:5,4:9:54.23:238,0,54	0/0:14,0:14:36.11:0,36,458	0/1:6,6:12:3.72:304,0,4	0/0:21,0:21:47.30:0,47,443	0/0:18,0:18:54.17:0,54,688	0/0:41,0:41:99:0,109,1025	0/0:41,0:40:99:0,117,1487	0/0:24,0:23:48.11:0,48,554	0/0:12,0:12:30.02:0,30,300	0/1:14,1:15:82.52:83,0,96	0/1:6,1:7:38.67:39,0,103	0/0:15,0:15:42.13:0,42,534	0/0:30,0:30:84.25:0,84,1055	0/1:11,2:13:99:152,0,128	0/0:19,0:19:45.14:0,45,573	0/0:23,0:23:50.82:0,51,509	0/0:7,0:7:15.04:0,15,191
chr10	89507692	.	T	TTA	389.02	PASS	AB=0.784;AC=7;AF=0.125;AN=56;BaseQRankSum=7.099;DP=458;FS=27.151;HRun=0;HaplotypeScore=98.2222;InbreedingCoeff=-0.1537;MQ=52.95;MQ0=10;MQRankSum=-6.389;QD=5.89;ReadPosRankSum=1.454;VQSLOD=1.0211;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:78.27:0,78,1271	0/0:6,0:5:15.05:0,15,245	0/0:5,0:1:3.01:0,3,49	0/0:12,0:7:3.03:0,3,154	0/1:11,2:12:6.09:6,0,411	0/0:18,0:18:51.17:0,51,829	0/0:33,0:31:75.26:0,75,1218	0/0:14,0:11:30.10:0,30,480	0/1:5,7:12:99:190,0,212	0/0:18,0:18:51.16:0,51,808	0/0:16,0:16:45.14:0,45,706	0/1:7,3:9:85.70:86,0,266	0/0:14,0:14:42.14:0,42,685	0/1:3,5:9:99:176,0,120	0/0:21,0:21:54.18:0,54,881	0/0:18,0:18:54.18:0,54,881	0/0:28,0:27:75.26:0,75,1209	0/0:36,0:35:99:0,99,1615	0/0:16,0:15:42.08:0,42,612	0/0:10,0:10:30.09:0,30,463	0/1:5,1:6:21.14:21,0,181	0/1:5,1:6:18.99:19,0,224	0/0:15,0:15:42.14:0,42,682	0/0:29,0:29:87.30:0,87,1407	0/1:9,1:10:16.87:17,0,272	0/0:16,0:16:48.14:0,48,716	0/0:23,0:23:51.14:0,51,807	0/0:11,0:10:27.09:0,27,440
chr10	89507743	.	GAGAA	G	661.92	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=8.525;DP=476;FS=8.786;HRun=0;HaplotypeScore=91.8716;InbreedingCoeff=0.8875;MQ=54.71;MQ0=14;MQRankSum=-8.655;QD=7.52;ReadPosRankSum=-0.977;VQSLOD=1.2840;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:28.84:195,29,0	1/1:2,0:3:5.69:46,6,0	0/0:40,0:4:5.98:0,6,88	0/0:51,0:12:32.86:0,33,383	0/0:15,0:15:42.08:0,42,779	0/1:8,0:8:0.33:38,0,0	1/1:18,0:18:40.25:245,40,0	0/0:20,0:20:57.19:0,57,1205	0/0:9,0:9:27.09:0,27,651	0/0:17,0:17:48.15:0,48,1072	0/0:13,0:13:36.09:0,36,683	0/0:9,0:8:21.07:0,21,524	0/0:11,0:11:33.09:0,33,650	0/0:10,0:10:30.06:0,30,714	1/1:12,3:17:25:176,25,0	0/0:18,0:18:48.12:0,48,1067	1/1:13,2:14:21.12:135,21,0	0/0:29,0:29:78.19:0,78,1671	0/0:13,0:11:33.10:0,33,760	0/0:9,0:9:21.06:0,21,431	0/0:5,0:5:15.01:0,15,263	0/0:6,0:6:14.90:0,15,273	0/0:16,0:16:45.12:0,45,996	0/0:28,0:27:81.18:0,81,1903	0/0:11,0:10:30.03:0,30,733	0/0:22,0:22:60.19:0,60,1299	0/0:27,0:27:63.22:0,63,1476	0/0:9,0:9:27.09:0,27,664
chr10	89507744	.	AG	A	1010.96	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.919;DP=481;FS=10.680;HRun=2;HaplotypeScore=74.5021;InbreedingCoeff=0.9379;MQ=54.52;MQ0=14;MQRankSum=-8.392;QD=10.87;ReadPosRankSum=-0.782;VQSLOD=0.4493;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,15:27:31.81:302,32,0	1/1:2,1:3:5.49:33,5,0	0/0:41,0:4:5.93:0,6,58	0/0:50,1:12:23.02:0,23,243	0/0:15,0:15:39.02:0,39,491	1/1:3,6:9:11.48:133,11,0	1/1:14,6:19:27.13:264,27,0	0/0:21,0:21:62.14:0,62,761	0/0:10,0:10:30.07:0,30,398	0/0:16,0:16:48.14:0,48,614	0/0:15,0:15:33:0,33,401	0/0:9,0:8:21.07:0,21,292	0/0:11,0:11:33.08:0,33,413	0/0:10,0:10:26.30:0,26,336	1/1:12,4:16:35.91:256,36,0	0/0:16,0:16:48.12:0,48,615	1/1:11,5:15:26.68:204,27,0	0/0:29,0:29:78.16:0,78,982	0/0:13,0:11:33.10:0,33,443	0/0:9,0:9:20.95:0,21,234	0/0:5,0:5:15.01:0,15,172	0/0:6,0:6:14.90:0,15,160	0/0:16,0:16:40.45:0,40,522	0/0:29,0:28:81.10:0,81,1042	0/0:11,0:10:30.03:0,30,387	0/0:20,0:20:60.18:0,60,808	0/0:26,0:26:58.53:0,59,754	0/0:9,0:9:27.09:0,27,372
chr10	89507753	.	AAG	A	1148.67	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.369;DP=490;FS=31.994;HRun=0;HaplotypeScore=83.7295;InbreedingCoeff=0.9334;MQ=54.41;MQ0=11;MQRankSum=-9.622;QD=11.72;ReadPosRankSum=-1.328;VQSLOD=1.5596;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,12:29:57.78:393,58,0	1/1:6,1:7:14.62:104,15,0	0/0:36,0:4:8.13:0,8,69	0/0:52,0:15:19.99:0,20,198	0/0:16,0:16:41.88:0,42,561	1/1:5,6:11:6.03:168,6,0	1/1:11,7:17:11.23:194,11,0	0/0:24,0:24:42.98:0,43,759	0/0:10,0:10:30.07:0,30,454	0/0:16,0:16:48.14:0,48,696	0/0:18,0:18:48.07:0,48,562	0/0:10,0:10:23.98:0,24,340	0/0:10,0:10:30.04:0,30,389	0/0:12,0:12:35.97:0,36,499	1/1:11,4:15:37.03:255,37,0	0/0:16,0:16:48.12:0,48,716	1/1:12,5:17:30.30:214,30,0	0/0:25,0:25:69.01:0,69,994	0/0:16,0:14:42.03:0,42,580	0/0:11,0:11:26.97:0,27,339	0/0:4,0:4:11.99:0,12,165	0/0:4,0:4:9.03:0,9,151	0/0:14,0:14:38.92:0,39,588	0/0:26,0:25:72.22:0,72,1171	0/0:12,0:11:30.10:0,30,501	0/0:22,0:22:65.58:0,66,836	0/0:25,0:25:58.66:0,59,858	0/0:12,0:12:30.02:0,30,426
chr10	89507780	.	G	GA	6241.51	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-0.275;DP=507;FS=3.610;HRun=8;HaplotypeScore=69.7277;InbreedingCoeff=0.9595;MQ=59.51;MQ0=6;MQRankSum=-5.130;QD=22.05;ReadPosRankSum=0.197;VQSLOD=5.2205;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,16:28:48.09:526,48,0	1/1:4,6:10:21.06:237,21,0	0/0:28,0:8:17.99:0,18,156	0/0:34,1:10:18.67:0,19,150	1/1:9,17:26:33.57:381,34,0	1/1:4,11:15:35.59:390,36,0	1/1:4,15:19:33.10:381,33,0	1/1:6,17:23:51.05:554,51,0	1/1:3,7:10:24.06:267,24,0	0/0:19,0:19:51.01:0,51,461	0/0:21,0:21:50.99:0,51,456	1/1:7,3:10:12.03:130,12,0	0/0:8,0:8:24.01:0,24,220	1/1:5,7:13:22.30:236,22,0	1/1:2,9:11:27.08:312,27,0	0/0:16,0:16:36.01:0,36,328	1/1:6,10:16:33.03:353,33,0	0/0:22,0:22:54.02:0,54,494	1/1:5,19:22:54.16:622,54,0	1/1:3,16:19:39.12:450,39,0	1/1:2,1:3:3.01:35,3,0	1/1:3,6:9:19.87:213,20,0	0/0:18,0:18:51.03:0,51,466	0/0:26,0:26:62.98:0,63,568	1/1:11,10:19:35.37:378,35,0	0/0:19,1:20:10.40:0,10,350	1/1:7,18:25:69.18:779,69,0	0/0:11,0:11:26.94:0,27,233
chr10	89507930	.	C	CTTG	4352.98	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.095;DP=525;FS=12.273;HRun=0;HaplotypeScore=87.6271;InbreedingCoeff=0.9931;MQ=79.95;MQ0=0;MQRankSum=-12.276;QD=51.82;ReadPosRankSum=2.308;VQSLOD=6.3259;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:18:30.10:639,30,0	1/1:0,6:7:18.06:417,18,0	0/0:18,0:18:51.10:0,51,836	0/0:13,0:13:36.02:0,36,551	0/0:15,0:15:42.14:0,42,779	1/1:1,5:9:15.05:354,15,0	1/1:0,13:16:39.13:882,39,0	0/0:32,0:32:84.25:0,84,1477	0/0:19,0:19:45.15:0,45,839	0/0:19,0:19:48.60:0,49,803	0/0:12,0:12:33.11:0,33,614	0/0:22,0:22:63.20:0,63,1115	0/0:12,0:12:33.11:0,33,615	0/0:26,0:26:75.26:0,75,1397	1/1:0,13:13:36.12:843,36,0	0/0:17,0:17:48.16:0,48,895	1/1:0,20:20:54.15:1217,54,0	0/0:25,0:25:75.24:0,75,1363	0/0:26,0:26:75.25:0,75,1341	0/0:21,0:21:60.21:0,60,1117	0/0:41,0:41:99:0,120,2136	0/0:11,0:11:30.06:0,30,509	0/0:20,0:20:54.10:0,54,864	0/0:34,0:34:96.32:0,96,1737	0/0:13,0:13:33.07:0,33,579	0/0:19,0:19:57.20:0,57,1038	0/0:20,0:20:60.17:0,60,1026	0/0:6,0:6:18.06:0,18,336
chr10	89508555	.	TTTTG	T	625.49	PASS	AB=0.965;AC=14;AF=0.259;AN=54;BaseQRankSum=5.787;DP=386;FS=40.581;HRun=0;HaplotypeScore=112.5196;InbreedingCoeff=-0.2281;MQ=38.61;MQ0=8;MQRankSum=-4.124;QD=3.31;ReadPosRankSum=5.077;VQSLOD=-0.1405;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:17:70.25:133,0,70	0/0:2,0:2:5.80:0,6,41	0/0:17,0:4:9.33:0,9,76	./.	0/1:20,1:21:19.72:20,0,131	0/1:14,0:13:50.23:50,0,78	0/1:15,0:14:47.40:47,0,90	0/0:22,0:22:44.49:0,44,260	0/0:8,0:8:6.45:0,6,64	0/0:18,0:18:44.18:0,44,395	0/0:16,0:16:34.36:0,34,275	0/1:9,0:10:44.27:44,0,52	0/0:9,0:9:7.72:0,8,181	0/1:10,0:10:35.72:57,0,36	0/1:13,0:13:67.66:68,0,78	0/0:17,0:17:6.41:0,6,299	0/1:22,0:21:50.37:141,0,50	0/0:14,0:13:14.11:0,14,213	0/0:14,0:11:20.14:0,20,176	0/1:25,0:24:47.40:47,0,70	1/1:3,1:4:7.99:62,8,0	0/1:13,1:14:30.90:31,0,98	0/0:5,0:5:11.58:0,12,79	0/0:7,0:7:8.25:0,8,78	0/1:6,1:7:26.33:26,0,46	0/0:18,0:18:44.41:0,44,372	0/1:14,0:14:50.81:51,0,64	0/0:26,0:26:7.59:0,8,371
chr10	89508570	.	T	TC	2446.67	PASS	AB=0.565;AC=21;AF=0.438;AN=48;BaseQRankSum=5.671;DP=293;FS=8.030;HRun=1;HaplotypeScore=76.0335;InbreedingCoeff=0.8936;MQ=39.54;MQ0=5;MQRankSum=-2.635;QD=17.23;ReadPosRankSum=1.567;VQSLOD=3.4898;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:18:10:337,10,0	./.	./.	./.	1/1:2,15:17:32.87:389,33,0	1/1:2,0:15:34.33:173,34,0	1/1:5,0:18:43.08:232,43,0	0/0:16,0:15:33.02:0,33,387	1/1:2,8:9:15.01:191,15,0	0/0:13,0:13:36.02:0,36,403	0/0:8,0:8:24.04:0,24,282	1/1:2,10:12:14.84:185,15,0	0/0:7,0:7:21.06:0,21,259	1/1:1,9:10:11.91:171,12,0	1/1:3,9:12:21.07:301,21,0	0/0:13,0:13:33.01:0,33,349	0/1:3,10:12:6.85:197,0,7	0/0:8,0:8:17.96:0,18,180	0/0:7,0:6:18.02:0,18,211	0/0:18,0:18:39.13:0,39,496	./.	1/1:0,6:6:18.06:257,18,0	0/0:9,0:9:23.98:0,24,252	0/0:5,0:5:9.02:0,9,100	1/1:0,8:8:15.05:214,15,0	0/0:16,0:16:45.13:0,45,542	0/0:13,0:13:33.05:0,33,362	0/0:14,0:14:32.93:0,33,387
chr10	89509127	.	TG	T	1069.69	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.759;DP=700;FS=3.261;HRun=4;HaplotypeScore=121.7025;InbreedingCoeff=0.9965;MQ=79.98;MQ0=2;MQRankSum=-1.436;QD=11.14;ReadPosRankSum=-4.972;VQSLOD=0.2003;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:48:99:0,127,741	0/0:14,0:14:35.14:0,35,210	0/0:42,0:38:79.21:0,79,906	0/0:20,0:17:16.93:0,17,223	0/0:24,0:24:53.79:0,54,379	0/0:26,0:26:67.17:0,67,413	0/0:31,0:31:79.64:0,80,506	1/1:24,3:27:55.58:355,56,0	0/0:31,0:31:76.87:0,77,469	0/0:26,0:26:69.01:0,69,771	0/0:14,0:14:42.12:0,42,564	0/0:21,0:21:52.52:0,53,314	0/0:24,0:24:72.16:0,72,930	0/0:26,0:26:70.52:0,71,434	0/0:27,0:27:64.78:0,65,402	0/0:19,0:19:54.03:0,54,642	0/0:33,0:33:85.39:0,85,527	0/0:30,0:30:87.23:0,87,1149	1/1:22,1:23:55.02:406,55,0	1/1:25,0:25:42.61:296,43,0	0/0:34,0:33:88.53:0,89,572	0/0:15,0:15:40.90:0,41,255	0/0:18,0:18:51.59:0,52,644	0/0:28,0:28:69.69:0,70,933	0/0:15,0:15:40.77:0,41,249	0/0:25,0:25:69.15:0,69,856	1/1:21,0:21:28.19:174,28,0	0/0:9,0:9:27.09:0,27,372
chr10	89509130	.	G	GT	1382.81	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-0.644;DP=705;FS=8.371;HRun=0;HaplotypeScore=124.8952;InbreedingCoeff=0.9605;MQ=81.29;MQ0=2;MQRankSum=1.543;QD=13.97;ReadPosRankSum=-3.825;VQSLOD=3.7636;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:51:99:0,135,1730	0/0:13,0:13:36.01:0,36,452	0/0:43,0:38:57.12:0,57,867	0/0:22,0:18:10.88:0,11,264	0/0:25,0:26:74.84:0,75,922	0/0:26,0:26:69.22:0,69,910	0/0:30,0:30:81.27:0,81,1083	1/1:11,14:26:38.08:497,38,0	0/0:31,0:31:81.26:0,81,1072	0/0:25,0:25:72.19:0,72,929	0/0:14,0:14:42.14:0,42,586	0/0:20,0:20:57.18:0,57,736	0/0:25,0:25:72.12:0,72,961	0/0:25,0:25:72.23:0,72,949	0/0:26,0:26:66.22:0,66,879	0/0:19,0:19:57.18:0,57,778	0/0:34,0:34:87.29:0,87,1161	0/0:31,0:31:93.25:0,93,1236	1/1:11,15:27:42.39:376,42,0	1/1:8,16:24:6.35:355,6,0	0/0:36,0:35:90.30:0,90,1202	0/0:14,0:14:42.12:0,42,530	0/0:19,0:19:53.49:0,53,690	0/0:25,0:25:72.24:0,72,998	0/0:14,0:14:42.14:0,42,556	0/0:26,0:26:74.31:0,74,988	1/1:4,18:22:29.39:309,29,0	0/0:9,0:9:27.09:0,27,377
chr10	89509131	.	GTT	G	9301.43	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=2.599;DP=707;FS=1.716;HRun=10;HaplotypeScore=108.9688;InbreedingCoeff=0.9996;MQ=80.60;MQ0=2;MQRankSum=-0.455;QD=26.88;ReadPosRankSum=7.486;VQSLOD=4.3668;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,51:51:99:1438,129,0	1/1:1,12:13:30.07:334,30,0	0/0:40,0:35:71.03:0,71,904	0/0:23,0:19:30.14:0,30,292	1/1:3,23:26:65.36:734,65,0	1/1:4,22:26:57.15:635,57,0	1/1:3,27:30:72.19:803,72,0	0/0:27,0:27:51.88:0,52,571	1/1:2,28:31:66.10:793,66,0	0/0:24,0:26:54.17:0,54,818	0/0:14,0:14:39.13:0,39,619	1/1:1,19:20:54.14:602,54,0	0/0:25,0:25:69.21:0,69,1031	1/1:2,23:25:69.10:752,69,0	1/1:3,23:26:57.15:635,57,0	0/0:19,0:19:48.12:0,48,694	1/1:1,33:34:84.22:937,84,0	0/0:31,0:31:93.25:0,93,1375	0/0:26,0:26:54.49:0,54,500	0/0:25,0:25:57.07:0,57,590	1/1:5,31:35:75.19:836,75,0	1/1:1,12:13:30.07:334,30,0	0/0:17,0:21:56.65:0,57,781	0/0:26,0:26:71.72:0,72,1082	1/1:0,14:14:42.11:468,42,0	0/0:26,0:26:69.21:0,69,1040	0/0:23,0:23:38.88:0,39,380	0/0:9,0:9:27.09:0,27,428
chr10	89509410	.	G	GAA	6082.04	PASS	AB=0.593;AC=29;AF=0.518;AN=56;BaseQRankSum=6.506;DP=615;FS=0.000;HRun=10;HaplotypeScore=97.3632;InbreedingCoeff=0.6782;MQ=64.73;MQ0=7;MQRankSum=-1.439;QD=16.18;ReadPosRankSum=0.808;VQSLOD=3.3313;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,42:49:94.45:1333,94,0	0/1:2,8:9:9.45:248,0,9	0/0:18,0:11:19.16:0,19,175	0/0:19,0:11:18.06:0,18,159	1/1:4,0:16:28.28:119,28,0	1/1:6,19:28:50.66:713,51,0	1/1:4,9:13:34.34:467,34,0	1/1:4,1:18:38.89:185,39,0	0/1:7,0:17:53.65:54,0,57	0/0:25,0:25:60.08:0,60,602	0/0:15,0:16:32.80:0,33,315	1/1:5,0:23:34.93:123,35,0	0/0:20,0:20:47.96:0,48,473	1/1:5,1:21:2.95:110,3,0	1/1:3,20:24:53.67:769,54,0	0/0:21,0:21:48.05:0,48,482	1/1:3,34:44:99:1443,109,0	0/0:40,0:41:98.86:0,99,1042	1/1:7,0:14:17.90:70,18,0	0/1:4,0:14:1.10:97,0,1	1/1:2,0:23:44.79:158,45,0	0/1:4,0:11:21.59:32,0,22	0/0:15,0:14:36.04:0,36,358	0/0:23,0:27:47:0,47,617	0/1:7,0:22:2.68:59,0,3	0/0:29,0:29:69.06:0,69,697	1/1:3,0:20:27.85:102,28,0	0/0:8,0:8:24.05:0,24,244
chr10	89510488	.	CGCGCGCGCGCGCGCGCGCAT	C	1873.89	PASS	AB=1.000;AC=16;AF=0.308;AN=52;BaseQRankSum=7.993;DP=508;FS=5.101;HRun=0;HaplotypeScore=199.7388;InbreedingCoeff=0.2495;MQ=55.36;MQ0=3;MQRankSum=-7.223;QD=9.10;ReadPosRankSum=2.480;VQSLOD=2.1056;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:99:155,0,585	0/1:4,0:4:11.01:50,0,11	0/0:6,0:4:5.97:0,6,99	0/0:17,0:8:9.43:0,9,97	1/1:0,14:15:0.89:2,1,0	0/1:14,0:14:31.89:293,0,32	0/1:24,0:24:57.93:195,0,58	0/0:12,0:12:23.96:0,24,590	1/1:2,16:19:9.03:500,9,0	0/0:31,0:30:90.31:0,90,6783	0/0:14,0:14:30.91:0,31,2124	1/1:1,14:16:3.01:171,3,0	0/0:9,0:9:24.08:0,24,1486	1/1:2,11:14:3.01:172,3,0	0/1:15,0:15:99:151,0,402	0/0:9,0:9:21.07:0,21,1214	0/1:29,0:29:99:179,0,371	0/0:39,0:39:99:0,114,8665	0/0:23,0:22:52.38:0,52,1456	0/0:17,0:17:6.01:0,6,135	./.	./.	0/0:13,0:13:33.11:0,33,2411	0/0:17,0:17:51.18:0,51,3811	1/1:4,17:21:3.01:157,3,0	0/0:16,0:16:42.13:0,42,2805	0/0:25,0:24:32.56:0,33,672	0/0:15,0:14:33.11:0,33,2340
chr10	89510494	.	CGCGCGCGCGCGCATGTGTGTGTGTGTGTGT	C	1910.76	PASS	AB=1.000;AC=13;AF=0.250;AN=52;BaseQRankSum=7.392;DP=480;FS=4.004;HRun=0;HaplotypeScore=239.9308;InbreedingCoeff=0.2068;MQ=53.60;MQ0=6;MQRankSum=-5.867;QD=11.65;ReadPosRankSum=3.142;VQSLOD=2.2634;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:99:211,0,205	1/1:5,0:5:3.01:58,3,0	0/0:4,0:2:5.75:0,6,66	0/0:15,0:6:5.31:0,5,59	1/1:15,0:15:1.25:3,1,0	1/1:0,13:14:9.03:702,9,0	1/1:6,14:20:6.02:482,6,0	0/0:8,0:8:3.33:0,3,352	0/1:18,0:18:56.12:60,0,56	0/0:32,0:31:92.34:0,92,7894	0/0:12,0:12:30.52:0,31,2169	0/0:15,0:15:3:0,3,25	0/0:9,0:9:21.05:0,21,1789	0/0:12,0:12:3.01:0,3,32	0/1:12,0:12:99:223,0,140	0/0:8,0:8:21.04:0,21,1169	0/1:25,0:24:99:270,0,118	0/0:42,0:42:99:0,117,10885	0/1:22,0:20:45.15:45,0,1430	0/0:18,0:18:6.46:0,6,213	./.	./.	0/0:12,0:12:30.10:0,30,2666	0/0:18,0:17:48.15:0,48,4354	0/0:18,0:18:2.99:0,3,23	0/0:16,0:16:45.15:0,45,3290	0/0:24,0:23:19.14:0,19,970	0/0:18,0:17:42.14:0,42,3466
chr10	89510500	.	CGCGCGCATGT	C	2930.62	PASS	AB=1.000;AC=27;AF=0.519;AN=52;BaseQRankSum=9.390;DP=470;FS=4.686;HRun=0;HaplotypeScore=120.1900;InbreedingCoeff=0.5340;MQ=53.36;MQ0=10;MQRankSum=-6.235;QD=11.72;ReadPosRankSum=1.603;VQSLOD=1.5400;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:9.93:247,0,10	1/1:6,0:6:2.50:66,2,0	0/0:3,0:1:2.99:0,3,23	0/0:14,0:5:2.83:0,3,29	1/1:16,0:15:0.47:1,0,0	1/1:14,0:14:9.03:210,9,0	1/1:14,0:14:6.02:140,6,0	1/1:11,0:11:3.75:258,4,0	1/1:18,0:18:9.03:167,9,0	0/0:33,0:31:88.67:0,89,2874	0/0:12,0:12:30.09:0,30,830	1/1:15,0:15:3.01:63,3,0	0/0:10,0:10:24.08:0,24,793	1/1:12,0:12:3.01:58,3,0	0/1:13,0:13:9.93:246,0,10	0/0:7,0:7:15.05:0,15,461	0/1:28,0:27:4.40:307,0,4	0/0:41,0:41:99:0,114,3830	1/1:17,0:15:40.95:740,41,0	1/1:2,15:17:2.93:55,3,0	./.	./.	0/0:12,0:12:30.10:0,30,1016	0/0:17,0:15:45.11:0,45,1612	1/1:18,0:18:3.01:51,3,0	0/0:18,0:18:51.03:0,51,1166	1/1:4,18:21:14.25:496,14,0	0/0:17,0:16:39.13:0,39,1017
chr10	89510501	.	GCGCGCA	G	1984.70	PASS	AB=1.000;AC=26;AF=0.500;AN=52;BaseQRankSum=9.259;DP=465;FS=8.009;HRun=0;HaplotypeScore=102.6682;InbreedingCoeff=0.5544;MQ=53.67;MQ0=10;MQRankSum=-6.098;QD=8.13;ReadPosRankSum=1.413;VQSLOD=1.5011;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:9.94:135,0,10	1/1:7,0:7:2.89:38,3,0	0/0:3,0:1:2.99:0,3,23	0/0:13,0:4:2.84:0,3,29	0/1:16,0:15:0:0,0,0	1/1:14,0:14:9.03:126,9,0	1/1:14,0:14:6.02:84,6,0	1/1:2,8:10:25.34:273,25,0	1/1:18,0:18:9.03:137,9,0	0/0:33,0:31:87.18:0,87,2495	0/0:12,0:12:30.55:0,31,707	1/1:15,0:15:3.01:43,3,0	0/0:10,0:10:22.79:0,23,513	1/1:12,0:12:3.01:42,3,0	0/1:13,0:13:9.94:134,0,10	0/0:7,0:7:15.04:0,15,354	0/1:28,0:27:4.59:166,0,5	0/0:40,0:40:99:0,113,2934	1/1:2,14:14:41.07:648,41,0	1/1:15,0:15:3.34:18,3,0	./.	./.	0/0:12,0:12:30.10:0,30,809	0/0:18,0:16:45.93:0,46,1238	1/1:18,0:18:3.01:53,3,0	0/0:19,0:19:11.49:0,11,844	1/1:20,0:19:14.75:263,15,0	0/0:17,0:16:35.09:0,35,682
chr10	89510502	.	CGCGCATGTGTGTGTGTGTGTGT	C	3623.61	PASS	AB=1.000;AC=24;AF=0.462;AN=52;BaseQRankSum=7.680;DP=459;FS=6.612;HRun=0;HaplotypeScore=169.7903;InbreedingCoeff=0.5629;MQ=53.59;MQ0=10;MQRankSum=-5.600;QD=17.59;ReadPosRankSum=3.022;VQSLOD=1.9193;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:12.04:740,12,0	1/1:0,7:7:2.99:185,3,0	0/0:3,0:1:2.68:0,3,11	0/0:12,0:4:3.27:0,3,30	1/1:16,0:15:0.89:2,1,0	1/1:14,0:14:9.03:476,9,0	1/1:14,0:14:6.02:322,6,0	0/1:10,0:10:53.31:53,0,745	1/1:18,0:18:3.05:30,3,0	0/0:32,0:30:89.34:0,89,5251	0/0:11,0:11:27.04:0,27,1457	1/1:15,0:15:1.82:5,2,0	0/0:10,0:10:24.08:0,24,1923	1/1:12,0:12:0.89:2,1,0	1/1:0,12:12:12.04:741,12,0	0/0:7,0:7:15.05:0,15,946	1/1:2,25:26:14.59:925,15,0	0/0:40,0:40:99:0,113,7676	0/1:16,0:14:99:129,0,812	0/0:15,0:15:3.48:0,3,97	./.	./.	0/0:12,0:12:30.07:0,30,1708	0/0:18,0:16:45.15:0,45,3066	1/1:18,0:18:2.74:12,3,0	0/0:19,0:19:53.79:0,54,2949	0/0:20,0:19:16.08:0,16,472	0/0:17,0:16:39.09:0,39,2136
chr10	89511155	.	T	TCCC	3555.86	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-10.855;DP=625;FS=7.958;HRun=4;HaplotypeScore=112.6037;InbreedingCoeff=0.9991;MQ=83.67;MQ0=0;MQRankSum=-2.306;QD=45.01;ReadPosRankSum=-2.524;VQSLOD=2.0418;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:96.31:0,96,1466	0/0:20,0:20:57.19:0,57,869	0/0:22,0:22:60.17:0,60,872	0/0:21,0:21:57.12:0,57,829	0/0:27,0:27:74.83:0,75,610	0/0:12,0:12:36.12:0,36,551	0/0:29,0:29:84.25:0,84,1257	1/1:4,18:23:57.15:1180,57,0	0/0:24,0:24:65.70:0,66,516	0/0:29,0:29:65:0,65,886	0/0:12,0:12:30.10:0,30,460	0/0:28,0:28:80.77:0,81,657	0/0:24,0:24:72.08:0,72,1070	0/0:19,0:19:44.90:0,45,379	0/0:26,0:26:75.24:0,75,1128	0/0:11,0:11:33.09:0,33,484	0/0:24,0:24:66.14:0,66,941	0/0:30,0:30:87.25:0,87,1296	1/1:4,6:11:24.05:430,24,0	1/1:5,20:25:45.11:942,45,0	0/0:47,0:47:99:0,123,975	0/0:17,0:17:38.91:0,39,310	0/0:18,0:18:42.14:0,42,643	0/0:19,0:19:48.16:0,48,731	0/0:19,0:19:50.78:0,51,426	0/0:15,0:15:45.15:0,45,690	1/1:2,16:20:45.15:1004,45,0	0/0:13,0:13:39.13:0,39,598
chr10	89511159	.	CG	C	5485.70	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.071;DP=634;FS=8.080;HRun=4;HaplotypeScore=76.9910;InbreedingCoeff=0.9997;MQ=84.77;MQ0=0;MQRankSum=-3.846;QD=29.34;ReadPosRankSum=3.926;VQSLOD=4.9370;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,105,1406	0/0:20,0:20:51.17:0,51,709	0/0:22,0:22:48.12:0,48,648	0/0:24,0:24:59.54:0,60,707	1/1:1,26:27:69.21:826,69,0	0/0:13,0:13:39.12:0,39,529	0/0:30,0:30:81.24:0,81,1098	0/0:18,0:18:43.84:0,44,301	1/1:0,24:24:66.20:789,66,0	0/0:30,0:30:75.07:0,75,989	0/0:12,0:12:33.10:0,33,440	1/1:1,27:28:78.24:931,78,0	0/0:25,0:25:75.23:0,75,1011	1/1:1,19:20:42.13:503,42,0	0/0:26,0:26:75.20:0,75,1009	0/0:12,0:12:33.10:0,33,446	0/0:23,0:23:63.21:0,63,877	0/0:31,0:31:87.23:0,87,1159	0/0:11,0:11:32.82:0,33,282	0/0:21,0:21:32.06:0,32,252	1/1:3,45:48:99:1436,120,0	1/1:0,20:20:39.12:467,39,0	0/0:18,0:18:49.97:0,50,654	0/0:19,0:19:57.16:0,57,774	1/1:3,17:20:41.10:533,41,0	0/0:17,0:17:51.12:0,51,675	0/0:17,0:17:47.38:0,47,311	0/0:19,0:19:48.09:0,48,614
chr10	89512211	.	AGTGGCTGAGGCCACAC	A	4937.61	PASS	AB=0.630;AC=15;AF=0.268;AN=56;BaseQRankSum=9.862;DP=680;FS=0.000;HRun=0;HaplotypeScore=283.0446;InbreedingCoeff=0.7293;MQ=68.56;MQ0=1;MQRankSum=-8.693;QD=22.65;ReadPosRankSum=1.405;VQSLOD=3.2998;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,11:38:3.01:133,3,0	1/1:11,6:17:12.04:434,12,0	0/0:13,0:13:9.08:0,9,154	0/0:9,0:9:3.01:0,3,91	0/0:15,0:15:18.06:0,18,1039	0/0:21,0:21:40.38:0,40,2344	0/0:35,0:35:84.29:0,84,5860	1/1:30,0:30:3:28,3,0	0/0:33,0:33:69.24:0,69,4380	0/0:25,0:25:33.11:0,33,1821	0/0:8,0:8:3:0,3,26	0/0:40,0:40:78.27:0,78,5303	0/0:19,0:19:39.12:0,39,2323	0/0:24,0:24:63.20:0,63,3755	1/1:10,20:30:45.15:1995,45,0	0/0:31,0:30:66.23:0,66,4733	0/1:14,20:34:53.14:901,0,53	0/0:22,0:22:51.13:0,51,3279	1/1:12,7:19:19.29:496,19,0	1/1:9,7:16:3.01:133,3,0	0/0:64,0:63:99:0,99,5567	0/0:15,0:15:12.04:0,12,783	0/0:16,0:16:21.07:0,21,960	0/0:23,0:23:57.18:0,57,3686	0/0:22,0:22:39.13:0,39,2242	0/0:19,0:19:36.12:0,36,2362	1/1:17,17:33:20.69:818,21,0	0/0:8,0:8:21.07:0,21,1347
chr10	89516214	.	GCGCTCGCT	G	4604.36	PASS	AB=0.615;AC=15;AF=0.268;AN=56;BaseQRankSum=11.070;DP=627;FS=1.081;HRun=0;HaplotypeScore=167.1581;InbreedingCoeff=0.8832;MQ=64.83;MQ0=0;MQRankSum=-11.717;QD=28.60;ReadPosRankSum=0.170;VQSLOD=4.4474;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,28:38:65.82:1651,66,0	1/1:4,4:8:6.02:156,6,0	0/0:12,0:10:6.02:0,6,253	0/0:12,0:11:15.05:0,15,538	0/0:10,0:10:21.07:0,21,801	0/0:12,0:17:9.03:0,9,314	0/0:22,0:35:30.10:0,30,860	1/1:1,0:9:9.92:133,10,0	0/0:24,0:24:54.19:0,54,2178	0/0:26,0:26:45.15:0,45,1736	0/0:13,0:13:15.05:0,15,628	0/0:30,0:30:72.25:0,72,2897	0/0:14,0:14:33.11:0,33,1374	0/0:30,0:30:63.22:0,63,2635	1/1:8,23:31:66.23:1704,66,0	0/0:21,0:21:54.19:0,54,2073	1/1:17,25:42:17.59:456,18,0	0/0:44,0:44:96.33:0,96,3813	1/1:12,0:19:18.06:335,18,0	0/1:3,0:8:0:0,0,0	0/0:72,0:72:99:0,150,6019	0/0:16,0:16:27.09:0,27,1116	0/0:9,0:9:15.05:0,15,626	0/0:28,0:28:75.26:0,75,3011	0/0:22,0:22:33.11:0,33,1309	0/0:25,0:25:57.17:0,57,2178	1/1:1,0:6:9.50:168,10,0	0/0:6,0:6:9.03:0,9,377
chr10	89517982	.	TTTTTGTTTTTTG	T	3653.43	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=-3.911;DP=452;FS=5.438;HRun=0;HaplotypeScore=130.1729;InbreedingCoeff=0.7827;MQ=52.87;MQ0=18;MQRankSum=0.124;QD=24.36;ReadPosRankSum=-8.218;VQSLOD=-0.4295;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:21,1:22:30.08:576,30,0	1/1:8,0:8:20.51:207,21,0	0/0:27,0:5:5.57:0,6,99	0/0:31,0:5:6.95:0,7,60	0/0:16,0:16:9.98:0,10,852	0/1:11,0:10:6.53:306,0,7	1/1:5,0:5:14.94:132,15,0	0/1:24,0:23:92.88:423,0,93	0/0:9,0:9:24.08:0,24,1205	0/0:21,0:21:60.11:0,60,2182	0/0:21,0:20:47.30:0,47,1502	0/0:10,0:10:20.92:0,21,632	0/0:13,0:13:29.93:0,30,1293	0/0:11,0:11:33.09:0,33,1095	1/1:10,0:10:8.74:190,9,0	0/0:20,0:20:51.14:0,51,1758	1/1:22,0:22:34.57:644,35,0	0/0:24,0:24:62.96:0,63,2536	1/1:22,0:20:36.53:600,37,0	1/1:3,13:15:20.88:185,21,0	0/0:7,0:6:18.04:0,18,513	0/0:2,0:2:6.02:0,6,323	0/0:11,0:11:30.01:0,30,1343	0/0:7,0:7:18.06:0,18,626	0/0:27,0:26:67.89:0,68,2715	0/0:26,0:24:72.17:0,72,2555	1/1:10,0:10:27.04:390,27,0	0/0:19,0:19:51.17:0,51,2009
chr10	89518437	.	GT	G	3162.54	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.345;DP=593;FS=0.000;HRun=1;HaplotypeScore=92.7040;InbreedingCoeff=0.9996;MQ=89.54;MQ0=0;MQRankSum=-14.564;QD=29.84;ReadPosRankSum=2.575;VQSLOD=3.3995;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:54.15:626,54,0	1/1:1,10:11:33.08:385,33,0	0/0:36,0:36:99:0,108,1667	0/0:22,0:22:66.22:0,66,1051	0/0:22,0:22:63.21:0,63,1002	1/1:0,10:10:30.09:355,30,0	1/1:2,23:25:75.07:855,75,0	0/0:25,0:25:75.26:0,75,1193	0/0:25,0:25:69.24:0,69,1102	0/0:22,0:22:66.22:0,66,1035	0/0:14,0:14:39.13:0,39,623	0/0:30,0:30:87.27:0,87,1342	0/0:27,0:27:81.26:0,81,1269	0/0:15,0:15:45.11:0,45,684	1/1:3,17:20:60.14:681,60,0	0/0:23,0:23:69.24:0,69,1103	1/1:1,16:17:38.98:450,39,0	0/0:23,1:24:34.87:0,35,1042	0/0:19,0:19:54.15:0,54,815	0/0:18,0:18:48.15:0,48,743	0/0:33,0:33:96.33:0,96,1534	0/0:19,0:19:57.18:0,57,875	0/0:20,0:20:60.19:0,60,931	0/0:28,0:28:84.16:0,84,1258	0/0:14,0:14:42.10:0,42,618	0/0:15,0:15:45.14:0,45,692	0/0:27,0:27:81.26:0,81,1261	0/0:9,0:9:27.09:0,27,431
chr10	89518439	.	ATCC	A	4110.90	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.123;DP=582;FS=1.345;HRun=0;HaplotypeScore=112.6267;InbreedingCoeff=0.9994;MQ=91.17;MQ0=0;MQRankSum=-15.069;QD=40.30;ReadPosRankSum=3.202;VQSLOD=4.9817;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:54.17:800,54,0	1/1:0,10:10:30.10:451,30,0	0/0:37,0:37:99:0,108,2336	0/0:22,0:22:66.18:0,66,1493	0/0:20,0:20:60.21:0,60,1455	1/1:0,10:10:30.10:452,30,0	1/1:1,23:24:72.07:1039,72,0	0/0:26,0:26:78.25:0,78,1800	0/0:25,0:25:72.24:0,72,1687	0/0:22,0:22:63.22:0,63,1552	0/0:14,0:14:39.13:0,39,947	0/0:28,0:28:84.27:0,84,1979	0/0:29,0:29:87.25:0,87,1910	0/0:15,0:15:45.15:0,45,1081	1/1:1,17:18:54.18:802,54,0	0/0:24,0:24:72.22:0,72,1648	1/1:1,16:17:39.13:567,39,0	0/0:23,1:24:29.41:0,29,1461	0/0:16,0:16:48.13:0,48,1038	0/0:16,0:16:45.13:0,45,1011	0/0:32,0:32:96.32:0,96,2245	0/0:18,0:18:54.13:0,54,1126	0/0:20,0:20:60.19:0,60,1390	0/0:27,0:27:81.28:0,81,1968	0/0:14,0:14:42.14:0,42,999	0/0:15,0:15:42.14:0,42,1034	0/0:27,0:27:81.26:0,81,1912	0/0:9,0:9:27.09:0,27,662
chr10	89518444	.	C	CA	4045.98	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.563;DP=596;FS=0.000;HRun=0;HaplotypeScore=96.1050;InbreedingCoeff=0.9975;MQ=91.87;MQ0=0;MQRankSum=-15.449;QD=33.44;ReadPosRankSum=1.684;VQSLOD=3.2126;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:60.19:763,60,0	1/1:2,10:12:30.10:389,30,0	0/0:37,0:37:87.85:0,88,1295	0/0:24,0:25:68.71:0,69,918	0/0:20,0:20:60.20:0,60,838	1/1:2,10:12:33.11:438,33,0	1/1:5,23:28:81.27:1079,81,0	0/0:32,0:32:90.28:0,90,1224	0/0:24,0:24:69.23:0,69,958	0/0:22,0:22:66.19:0,66,902	0/0:14,0:14:39.13:0,39,543	0/0:27,0:27:78.26:0,78,1088	0/0:26,0:26:78.22:0,78,1059	0/0:17,0:17:48.15:0,48,654	1/1:4,20:24:63.19:825,63,0	0/0:22,0:22:66.22:0,66,922	1/1:3,17:20:41.99:552,42,0	0/0:19,1:20:16.95:0,17,732	0/0:14,0:14:39.13:0,39,545	0/0:14,0:14:39.13:0,39,545	0/0:31,0:31:90.27:0,90,1223	0/0:18,0:18:51.17:0,51,705	0/0:19,0:19:57.18:0,57,781	0/0:26,0:26:78.26:0,78,1091	0/0:15,0:15:39.13:0,39,543	0/0:17,0:17:48.16:0,48,670	0/0:26,0:26:75.24:0,75,1029	0/0:9,0:9:27.09:0,27,378
chr10	89518980	.	GGT	G	2657.57	PASS	AC=14;AF=0.269;AN=52;BaseQRankSum=6.853;DP=503;FS=15.994;HRun=0;HaplotypeScore=67.2839;InbreedingCoeff=0.9875;MQ=47.83;MQ0=16;MQRankSum=-4.456;QD=24.84;ReadPosRankSum=-0.988;VQSLOD=2.6900;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:63.22:0,63,1134	0/0:6,0:6:12.04:0,12,216	./.	./.	1/1:2,18:20:27.09:376,27,0	0/0:19,0:19:48.16:0,48,864	0/0:18,0:16:39.13:0,39,700	0/0:37,0:31:81.28:0,81,1440	1/1:0,14:14:30.10:420,30,0	0/0:28,0:27:75.26:0,75,1346	0/0:20,0:20:36.12:0,36,641	1/1:0,16:16:33.11:461,33,0	0/0:19,0:18:45.15:0,45,810	1/1:1,17:18:33.11:461,33,0	0/0:18,0:18:45.15:0,45,810	0/0:19,0:18:57.20:0,57,1027	0/0:31,0:29:57.19:0,57,1011	0/0:28,0:23:66.20:0,66,1157	0/0:16,0:14:42.14:0,42,754	0/0:19,0:19:51.17:0,51,915	1/1:3,7:9:11.80:168,12,0	1/1:1,12:13:33.11:461,33,0	0/0:13,0:13:30.10:0,30,532	0/0:12,0:12:30.10:0,30,540	1/1:0,16:16:36.12:503,36,0	0/0:21,0:21:57.20:0,57,1018	0/0:26,0:24:57.20:0,57,1023	0/0:14,0:14:39.13:0,39,702
chr10	89523415	.	T	TAC	4991.10	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-11.857;DP=658;FS=2.452;HRun=0;HaplotypeScore=77.7605;InbreedingCoeff=0.9996;MQ=84.93;MQ0=0;MQRankSum=-4.098;QD=47.99;ReadPosRankSum=1.434;VQSLOD=5.9808;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,39:41:99:2078,111,0	1/1:1,9:10:27.09:500,27,0	0/0:18,0:18:34.83:0,35,517	0/0:30,0:30:81.25:0,81,1146	0/0:25,0:25:75.25:0,75,1103	0/0:17,0:17:48.14:0,48,686	0/0:21,0:21:60.17:0,60,845	0/0:32,0:32:96.32:0,96,1413	0/0:30,0:30:87.29:0,87,1281	0/0:20,0:20:57.19:0,57,823	0/0:12,0:12:33.11:0,33,486	0/0:34,0:34:99:0,99,1457	0/0:25,0:25:75.25:0,75,1100	0/0:26,0:26:75.24:0,75,1083	1/1:1,27:28:66.23:1236,66,0	0/0:22,0:22:63.21:0,63,926	1/1:2,22:25:63.05:1178,63,0	0/0:26,0:26:78.26:0,78,1141	0/0:23,0:23:60.19:0,60,866	0/0:21,0:21:57.19:0,57,836	0/0:45,0:45:99:0,129,1900	0/0:18,0:18:51.17:0,51,749	0/0:15,0:15:45.15:0,45,663	0/0:22,0:22:60.20:0,60,884	0/0:15,0:15:45.15:0,45,663	0/0:24,0:24:72.24:0,72,1057	0/0:18,0:18:54.18:0,54,789	0/0:15,0:15:45.15:0,45,663
chr10	89524285	.	GTTGT	G	2758.26	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.266;DP=541;FS=5.328;HRun=0;HaplotypeScore=90.1915;InbreedingCoeff=0.9710;MQ=79.98;MQ0=0;MQRankSum=-2.448;QD=35.36;ReadPosRankSum=4.470;VQSLOD=3.3791;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:36.12:625,36,0	1/1:0,3:3:9.03:156,9,0	0/0:23,0:21:39.13:0,39,965	0/0:17,0:17:27.09:0,27,667	0/0:10,0:10:27.09:0,27,650	0/0:14,0:14:42.14:0,42,1062	0/0:29,0:29:81.27:0,81,1846	0/0:32,0:32:69.24:0,69,1607	0/0:17,0:17:48.15:0,48,1100	0/0:20,0:20:39.13:0,39,897	0/0:11,0:11:24.07:0,24,549	0/0:31,0:31:90.29:0,90,2114	0/0:15,0:15:45.15:0,45,1060	0/0:17,0:17:48.16:0,48,1180	1/1:6,18:24:57.20:990,57,0	0/0:22,0:22:54.19:0,54,1342	1/1:5,24:29:66.23:1143,66,0	0/0:25,0:25:66.21:0,66,1621	0/0:13,0:13:30.10:0,30,698	0/0:15,0:15:30.10:0,30,715	0/0:31,0:31:57.18:0,57,1354	0/0:23,0:23:33.11:0,33,827	0/0:7,0:7:18.06:0,18,455	0/0:32,1:33:38.14:0,38,2124	0/0:9,0:9:27.09:0,27,603	0/0:19,0:19:48.16:0,48,1220	0/0:8,0:8:12.04:0,12,305	0/0:22,0:22:54.19:0,54,1371
chr10	89525082	.	A	AT	2029.54	PASS	AB=0.592;AC=11;AF=0.196;AN=56;BaseQRankSum=-7.210;DP=567;FS=4.715;HRun=12;HaplotypeScore=61.2297;InbreedingCoeff=0.6722;MQ=64.64;MQ0=1;MQRankSum=-0.189;QD=14.19;ReadPosRankSum=-0.666;VQSLOD=3.9844;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:35:68.65:0,69,477	0/0:11,0:12:31.86:0,32,225	0/0:6,0:6:13.68:0,14,81	0/0:9,0:8:11.25:0,11,69	1/1:8,14:22:24.47:379,24,0	0/0:14,1:16:2.68:0,3,174	0/0:15,0:15:38.73:0,39,280	0/0:16,2:20:11.59:0,12,239	0/1:3,12:15:4.76:282,0,5	0/0:28,0:28:68.57:0,69,502	0/0:12,0:14:24.88:0,25,162	0/1:8,14:22:10.77:230,0,11	0/0:23,0:23:59.64:0,60,437	1/1:5,16:22:27.66:403,28,0	0/0:14,1:15:38.75:0,39,285	0/0:22,1:24:29.50:0,30,371	0/0:28,0:31:68.71:0,69,477	0/0:21,0:23:58.70:0,59,422	0/0:26,0:29:47.79:0,48,321	0/0:18,1:19:12.56:0,13,255	0/1:8,16:25:2.58:332,0,3	1/1:4,9:13:18.03:175,18,0	0/0:19,0:20:46.73:0,47,332	0/0:16,0:16:26.29:0,26,195	1/1:9,15:24:7.26:394,7,0	0/0:27,0:28:73.61:0,74,530	0/0:28,0:30:71.68:0,72,499	0/0:10,0:10:14.83:0,15,109
chr10	89526759	.	AC	A	513.73	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=6.656;DP=416;FS=1.956;HRun=4;HaplotypeScore=78.6737;InbreedingCoeff=0.9067;MQ=66.72;MQ0=2;MQRankSum=-4.339;QD=16.05;ReadPosRankSum=-1.939;VQSLOD=2.9411;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,10:16:21.84:234,22,0	1/1:0,2:2:6.02:72,6,0	0/0:42,1:32:10.02:0,10,896	0/0:37,0:30:52.50:0,52,1005	0/0:15,0:16:17.97:0,18,233	0/0:12,0:12:24.04:0,24,311	0/0:25,0:25:60.20:0,60,836	0/0:21,0:21:63.19:0,63,841	0/0:23,0:23:48.07:0,48,626	0/0:6,0:6:15.05:0,15,207	0/0:5,0:5:12.04:0,12,163	0/0:35,0:36:23.03:0,23,990	0/0:10,0:10:30.10:0,30,416	0/0:22,0:22:33.95:0,34,431	1/1:0,4:4:12.04:143,12,0	0/0:5,0:5:12.04:0,12,168	1/1:4,6:10:18.05:213,18,0	0/0:17,0:17:51.17:0,51,711	0/0:6,0:6:18.06:0,18,252	0/0:7,0:7:21.07:0,21,291	0/0:25,0:24:37.47:0,37,537	0/0:12,0:12:30.10:0,30,418	0/0:8,0:8:21.07:0,21,289	0/0:13,0:13:36.12:0,36,504	0/0:20,0:21:36.12:0,36,503	0/0:8,0:8:24.08:0,24,336	0/0:4,0:4:12.04:0,12,168	./.
chr10	89526770	.	ATG	A	266.56	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=7.067;DP=378;FS=1.139;HRun=0;HaplotypeScore=80.7597;InbreedingCoeff=0.8041;MQ=69.05;MQ0=3;MQRankSum=-4.665;QD=14.03;ReadPosRankSum=-1.995;VQSLOD=2.6908;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,4:9:17.86:179,18,0	1/1:0,1:1:3.01:37,3,0	0/0:50,0:33:55.12:0,55,1428	0/0:51,0:36:77.50:0,78,1518	0/0:15,0:15:17.94:0,18,295	0/0:6,0:6:11.76:0,12,232	0/0:19,0:19:54.16:0,54,977	0/0:20,0:20:60.20:0,60,1126	0/0:21,1:22:41.89:0,42,800	0/0:7,0:7:21.07:0,21,401	0/0:5,0:5:12.04:0,12,222	0/0:33,2:35:10.87:0,11,1278	0/0:8,0:8:24.08:0,24,463	0/0:17,0:17:17.57:0,18,325	1/1:0,2:2:6.02:73,6,0	0/0:3,0:3:9.03:0,9,174	1/1:4,3:7:11.70:115,12,0	0/0:15,0:15:42.10:0,42,773	0/0:3,0:3:9.03:0,9,174	0/0:5,0:5:15.05:0,15,271	0/0:22,0:21:30.86:0,31,633	0/0:12,0:12:30.06:0,30,558	0/0:5,0:5:15.05:0,15,271	0/0:12,0:12:29.26:0,29,568	0/0:18,0:18:24.08:0,24,453	0/0:7,0:7:21.07:0,21,406	0/0:2,0:2:6.02:0,6,116	./.
chr10	89526805	.	ATATC	A	157.90	PASS	AC=8;AF=0.222;AN=36;BaseQRankSum=4.109;DP=117;FS=0.000;HRun=0;HaplotypeScore=48.2938;InbreedingCoeff=0.5589;MQ=83.13;MQ0=0;MQRankSum=-2.137;QD=5.26;ReadPosRankSum=1.907;VQSLOD=1.3519;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:11.69:85,12,0	./.	0/0:14,0:9:21.46:0,21,398	0/0:24,0:18:2.71:0,3,367	0/0:3,0:5:0:0,0,0	./.	1/1:4,0:4:8.60:27,9,0	0/0:5,0:5:15.05:0,15,400	1/1:3,2:8:2.99:23,3,0	0/0:2,0:2:6.02:0,6,141	./.	1/1:5,5:11:11.83:143,12,0	0/0:3,0:3:9.03:0,9,221	./.	./.	0/0:1,0:1:3.01:0,3,87	./.	0/0:5,0:5:12.04:0,12,330	0/0:1,0:1:3.01:0,3,87	0/0:4,0:4:12.04:0,12,321	./.	./.	./.	0/0:5,0:5:12.04:0,12,347	./.	0/0:2,0:2:6.02:0,6,174	0/0:1,0:1:3.01:0,3,87	0/0:1,0:1:3.01:0,3,74
chr10	89526807	.	ATC	A	66.96	PASS	AB=0.931;AC=6;AF=0.167;AN=36;BaseQRankSum=3.531;DP=111;FS=4.978;HRun=0;HaplotypeScore=43.2007;InbreedingCoeff=0.2773;MQ=84.71;MQ0=0;MQRankSum=-0.725;QD=1.39;ReadPosRankSum=0.292;VQSLOD=0.9315;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:5.59:0,6,17	./.	0/0:13,0:8:20.56:0,21,268	0/1:21,0:17:13.67:14,0,203	0/0:4,1:5:0:0,0,0	./.	0/1:4,0:4:6.97:43,0,7	0/0:5,0:5:15.04:0,15,223	1/1:7,1:8:2.84:14,3,0	0/0:1,0:1:3.01:0,3,61	./.	1/1:9,2:11:11.87:101,12,0	0/0:2,0:2:6.02:0,6,120	./.	./.	0/0:1,0:1:3.01:0,3,61	./.	0/0:4,0:4:11.99:0,12,201	0/0:1,0:1:3.01:0,3,61	0/0:4,0:4:12.01:0,12,172	./.	./.	./.	0/0:4,0:4:12.04:0,12,241	./.	0/0:2,0:2:6.02:0,6,121	0/0:2,0:2:6.01:0,6,86	0/0:1,0:1:3.01:0,3,40
chr10	89527359	.	G	GTGTACTC	6810.23	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.563;DP=804;FS=0.000;HRun=0;HaplotypeScore=187.0729;InbreedingCoeff=0.9870;MQ=88.13;MQ0=0;MQRankSum=-12.281;QD=60.27;ReadPosRankSum=1.064;VQSLOD=4.8592;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,24:42:63.21:2510,63,0	1/1:3,4:8:15.01:498,15,0	0/0:33,0:33:90.29:0,90,2133	0/0:27,0:27:71.97:0,72,1671	0/0:21,0:21:60.21:0,60,1529	0/0:27,0:27:75.26:0,75,1917	0/0:31,0:31:87.30:0,87,2172	0/0:39,0:39:99:0,111,2582	0/0:22,0:22:54.19:0,54,1367	0/0:35,0:35:96.33:0,96,2413	0/0:25,0:25:69.24:0,69,1777	0/0:39,0:39:99:0,114,2861	0/0:26,0:26:78.25:0,78,1905	0/0:33,0:33:96.30:0,96,2375	1/1:15,17:36:57.67:2271,58,0	0/0:44,0:44:99:0,129,3299	1/1:9,15:26:42.14:1532,42,0	0/0:18,0:18:48.05:0,48,1135	0/0:21,0:21:60.21:0,60,1553	0/0:28,0:28:78.25:0,78,1899	0/0:54,0:54:99:0,154,3896	0/0:30,0:30:87.30:0,87,2250	0/0:16,0:16:42.13:0,42,1007	0/0:30,0:30:84.29:0,84,2042	0/0:20,0:20:57.17:0,57,1372	0/0:39,0:39:99:0,111,2776	0/0:29,0:28:81.28:0,81,2055	0/0:4,0:4:12.04:0,12,312
chr10	89528954	.	T	TC	445.21	PASS	AC=4;AF=0.125;AN=32;BaseQRankSum=0.895;DP=168;FS=2.394;HRun=0;HaplotypeScore=38.2548;InbreedingCoeff=0.6835;MQ=57.15;MQ0=22;MQRankSum=2.211;QD=19.36;ReadPosRankSum=2.130;VQSLOD=5.3838;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:6,0:3:5.80:0,6,32	./.	1/1:5,11:14:26.70:385,27,0	1/1:3,4:6:12.04:167,12,0	0/0:33,0:33:90.62:0,91,1003	./.	0/0:5,0:3:6.01:0,6,67	0/0:7,0:6:17.99:0,18,196	./.	0/0:7,0:6:14.97:0,15,166	./.	./.	0/0:3,0:2:5.98:0,6,62	./.	0/0:23,0:18:51.15:0,51,685	0/0:18,0:17:47.79:0,48,571	0/0:3,0:3:3.01:0,3,40	./.	./.	0/0:3,0:2:5.93:0,6,40	0/0:6,0:6:12:0,12,145	./.	0/0:4,0:4:12:0,12,144	0/0:7,0:6:18.04:0,18,203	0/0:11,0:10:22.90:0,23,350
chr10	89530588	.	AT	A	2211.79	PASS	AB=0.800;AC=26;AF=0.464;AN=56;BaseQRankSum=2.751;DP=633;FS=13.822;HRun=15;HaplotypeScore=67.3555;InbreedingCoeff=0.7587;MQ=67.72;MQ0=0;MQRankSum=-0.778;QD=6.62;ReadPosRankSum=4.594;VQSLOD=1.1467;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:32:24.38:0,24,164	0/0:8,0:10:17.23:0,17,91	0/0:12,0:12:12.74:0,13,79	0/0:5,0:3:2.74:0,3,12	1/1:10,16:26:16.96:241,17,0	1/1:6,17:26:44.44:267,44,0	1/1:2,13:16:37.46:237,37,0	1/1:20,24:44:55.63:363,56,0	1/1:9,13:23:5.48:136,5,0	0/0:26,1:27:8.14:0,8,182	0/0:22,0:23:38.98:0,39,349	1/1:10,11:23:21.44:127,21,0	0/0:29,0:29:71.50:0,72,551	0/1:9,3:12:13.27:13,0,18	0/0:7,0:28:34.53:0,35,198	0/0:29,0:29:47.84:0,48,395	0/0:8,0:23:23.70:0,24,142	0/0:11,0:13:23.89:0,24,199	1/1:9,14:24:9.56:173,10,0	1/1:12,18:30:14.03:222,14,0	1/1:14,9:25:19.48:123,19,0	1/1:6,15:22:25.41:159,25,0	0/0:20,1:23:34.45:0,34,392	0/0:13,1:19:13.24:0,13,204	1/1:6,14:20:11.13:202,11,0	0/0:25,0:25:47.54:0,48,373	1/1:18,13:30:2.64:130,3,0	0/1:9,3:12:30.82:31,0,128
chr10	89531152	.	GACACAC	G	6152.91	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.811;DP=804;FS=0.389;HRun=0;HaplotypeScore=182.4890;InbreedingCoeff=0.9781;MQ=58.51;MQ0=4;MQRankSum=-14.340;QD=32.05;ReadPosRankSum=1.923;VQSLOD=4.5344;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:86.44:0,86,2718	0/0:11,0:11:27.09:0,27,856	0/0:45,0:31:56.39:0,56,1400	0/0:38,0:26:61.70:0,62,1242	1/1:3,28:31:47.61:798,48,0	0/0:23,0:23:59.86:0,60,1514	0/0:27,0:29:75.20:0,75,2084	0/0:29,0:29:78.20:0,78,1645	1/1:4,22:26:56.92:1159,57,0	0/0:23,0:24:69.20:0,69,1680	0/0:29,0:30:81.23:0,81,2135	1/1:0,31:31:66.09:1285,66,0	0/0:34,0:34:86.90:0,87,2363	1/1:3,23:26:48.16:996,48,0	0/0:34,0:35:98.45:0,98,2641	0/0:23,0:24:69.24:0,69,2163	0/0:31,0:34:87.23:0,87,2402	0/0:19,0:19:48.06:0,48,1300	0/0:16,0:18:42.07:0,42,866	0/0:27,0:27:81.23:0,81,2207	1/1:7,18:25:5.55:105,6,0	1/1:5,23:28:42.08:860,42,0	0/0:28,0:30:72.23:0,72,1964	0/0:45,0:46:99:0,99,2580	1/1:3,22:25:45.15:949,45,0	0/0:30,0:32:87.26:0,87,2302	0/0:34,0:38:99:0,105,2763	0/0:7,0:7:21.02:0,21,516
chr10	89531467	.	CTGTGTGTGTGTGTGTGTGTGTGTGTGTG	C	727.79	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=2.139;DP=598;FS=3.564;HRun=0;HaplotypeScore=329.9268;InbreedingCoeff=0.3963;MQ=57.82;MQ0=28;MQRankSum=-2.424;QD=15.48;ReadPosRankSum=1.254;VQSLOD=1.9609;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,16:34:0:0,0,0	0/1:4,0:4:6.98:19,0,7	0/0:32,0:18:0.94:0,1,2	0/0:39,0:16:2.92:0,3,17	0/0:19,0:18:9.01:0,9,456	0/0:20,0:19:36.08:0,36,2534	0/0:21,0:20:26.59:0,27,1805	0/0:19,0:18:15.04:0,15,428	0/0:13,0:15:18.05:0,18,595	0/0:23,0:22:39.12:0,39,2176	0/0:9,0:8:9.03:0,9,752	0/0:24,0:34:51.18:0,51,4103	0/0:17,0:17:22.63:0,23,1552	0/0:20,0:21:33.10:0,33,2199	1/1:6,16:21:9.03:636,9,0	0/0:13,0:14:24.05:0,24,1727	0/1:21,0:19:99:178,0,165	0/0:19,0:19:45.15:0,45,4166	0/0:26,0:26:28.86:0,29,1753	0/0:12,0:11:12.04:0,12,806	0/0:35,0:35:51.65:0,52,3436	0/0:14,0:14:6.02:0,6,582	0/0:20,0:20:24.07:0,24,2344	0/0:25,0:25:39.12:0,39,3006	0/0:15,0:16:30.10:0,30,1877	0/0:24,0:25:39.13:0,39,2463	0/0:20,0:23:36.08:0,36,1734	0/0:7,0:5:6.02:0,6,315
chr10	89532046	.	T	TA	807.98	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.067;DP=573;FS=1.502;HRun=9;HaplotypeScore=55.2104;InbreedingCoeff=0.9591;MQ=69.74;MQ0=0;MQRankSum=0.569;QD=18.79;ReadPosRankSum=1.214;VQSLOD=3.9552;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:77.97:0,78,674	0/0:7,0:7:18:0,18,156	0/0:9,0:9:14.95:0,15,121	0/0:7,0:7:9.75:0,10,77	0/0:29,0:29:71.93:0,72,616	1/1:7,25:32:34.92:663,35,0	1/1:3,8:11:24.06:266,24,0	0/0:32,0:32:71.97:0,72,623	0/0:23,0:23:62.96:0,63,540	0/0:27,0:27:68.98:0,69,599	0/0:19,0:20:56.02:0,56,475	0/0:13,0:13:35.96:0,36,306	0/0:22,0:22:62.99:0,63,547	0/0:17,0:17:41.97:0,42,361	0/0:19,0:19:53.99:0,54,469	0/0:24,0:24:62.97:0,63,547	0/0:13,0:13:38.99:0,39,338	0/0:19,0:19:50.99:0,51,443	0/0:14,0:14:32.97:0,33,282	0/0:35,0:35:92.94:0,93,801	0/0:25,0:25:53.95:0,54,469	0/0:24,0:24:71.95:0,72,618	0/0:14,0:14:38.97:0,39,335	0/0:14,0:14:29.98:0,30,260	0/0:22,0:23:56.02:0,56,474	0/0:28,1:29:35.78:0,36,538	0/0:35,0:35:98.97:0,99,856	0/0:10,0:10:20.94:0,21,182
chr10	89532546	.	CT	C	3418.50	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.426;DP=722;FS=5.077;HRun=8;HaplotypeScore=70.7067;InbreedingCoeff=0.9998;MQ=89.48;MQ0=0;MQRankSum=-3.220;QD=25.51;ReadPosRankSum=2.556;VQSLOD=4.6378;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,41:42:99:1188,123,0	1/1:0,11:11:30.05:290,30,0	0/0:29,0:29:70.07:0,70,793	0/0:27,1:28:34:0,34,571	0/0:27,0:26:75.22:0,75,894	0/0:28,0:28:72.22:0,72,870	0/0:26,0:26:63.18:0,63,750	0/0:24,0:24:57.16:0,57,669	0/0:17,0:17:45.12:0,45,522	0/0:32,0:32:90.26:0,90,1069	0/0:21,0:21:54.12:0,54,633	0/0:36,0:36:96.29:0,96,1160	0/0:21,0:21:57.17:0,57,688	0/0:23,0:23:69.20:0,69,822	1/1:3,28:31:78.12:753,78,0	0/0:23,0:23:66.19:0,66,788	1/1:6,44:50:99:1188,123,0	0/0:16,0:16:42.11:0,42,495	0/0:21,0:21:51.15:0,51,604	0/0:29,0:29:81.25:0,81,979	0/0:21,0:21:63.19:0,63,761	0/0:26,0:26:66.20:0,66,793	0/0:16,0:16:45.14:0,45,544	0/0:23,0:23:69.17:0,69,817	0/0:23,0:23:66.15:0,66,771	0/0:37,0:37:99:0,102,1213	0/0:28,0:28:75.23:0,75,906	0/0:13,0:13:39.12:0,39,471
chr10	89536881	.	CACTT	C	7387.42	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.322;DP=723;FS=6.142;HRun=0;HaplotypeScore=117.1062;InbreedingCoeff=0.9990;MQ=86.43;MQ0=0;MQRankSum=-4.805;QD=44.50;ReadPosRankSum=2.970;VQSLOD=5.4834;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,3300	0/0:9,0:9:24.05:0,24,581	0/0:23,0:23:66.23:0,66,1638	0/0:29,0:29:78.27:0,78,1927	1/1:2,12:14:27.09:504,27,0	0/0:32,0:32:90.31:0,90,2394	0/0:20,0:20:60.21:0,60,1599	0/0:42,0:42:99:0,120,3054	1/1:0,19:19:57.20:1063,57,0	0/0:29,0:29:87.30:0,87,2271	0/0:16,0:16:45.15:0,45,1163	1/1:2,26:28:63.22:1175,63,0	0/0:31,0:31:84.29:0,84,2224	1/1:1,27:28:75.26:1399,75,0	0/0:28,0:28:84.26:0,84,2111	0/0:38,0:38:99:0,105,2763	0/0:32,0:32:93.32:0,93,2480	0/0:15,0:15:45.15:0,45,1176	0/0:23,0:23:63.22:0,63,1657	0/0:12,0:12:33.11:0,33,848	1/1:1,40:41:90.31:1679,90,0	1/1:1,14:15:33.11:616,33,0	0/0:24,0:24:69.24:0,69,1830	0/0:36,0:36:99:0,99,2632	1/1:0,21:21:51.17:951,51,0	0/0:39,0:39:99:0,117,3101	0/0:28,0:25:78.27:0,78,2021	0/0:8,0:8:24.08:0,24,616
chr10	89537270	.	G	GAC	659.77	PASS	AB=0.929;AC=16;AF=0.364;AN=44;BaseQRankSum=3.565;DP=130;FS=2.365;HRun=0;HaplotypeScore=44.0094;InbreedingCoeff=0.4983;MQ=60.72;MQ0=7;MQRankSum=-2.760;QD=10.47;ReadPosRankSum=1.679;VQSLOD=2.6895;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:11.84:124,12,0	1/1:2,1:3:7.83:67,8,0	0/0:13,0:3:8.24:0,8,91	0/1:12,0:4:13.76:19,0,14	./.	./.	0/0:8,0:6:10.61:0,11,77	0/1:5,1:5:13.09:89,0,13	0/0:2,0:2:2.68:0,3,11	./.	0/0:2,0:2:0:0,0,0	0/0:5,0:5:5.12:0,5,65	0/0:7,0:7:12.04:0,12,163	0/0:3,0:3:2.68:0,3,11	1/1:6,3:9:20.61:204,21,0	0/0:5,0:5:10.84:0,11,95	1/1:5,3:7:6.83:80,7,0	0/0:8,0:8:17.41:0,17,212	1/1:4,0:4:11.83:120,12,0	1/1:7,0:7:5.89:81,6,0	0/0:3,0:3:0:0,0,0	./.	./.	0/0:2,0:2:5.98:0,6,63	0/0:3,0:2:0:0,0,0	0/0:5,0:4:9.03:0,9,125	1/1:3,0:3:3.43:20,3,0	./.
chr10	89537272	.	G	GAC	37.52	PASS	AB=0.967;AC=20;AF=0.435;AN=46;BaseQRankSum=3.863;DP=129;FS=7.639;HRun=0;HaplotypeScore=45.7379;InbreedingCoeff=0.3672;MQ=61.42;MQ0=7;MQRankSum=-3.437;QD=0.52;ReadPosRankSum=0.543;VQSLOD=0.2943;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,1:11:3.31:15,3,0	0/1:3,0:3:3.54:4,0,11	0/0:13,0:3:8.94:0,9,97	0/1:12,0:4:7.59:8,0,67	./.	./.	0/0:8,0:6:8.70:0,9,51	0/1:6,0:5:3.21:21,0,3	0/1:2,0:2:0:0,0,0	0/0:1,0:1:0:0,0,0	0/0:2,0:2:0:0,0,0	0/0:5,0:5:1.70:0,2,32	0/0:7,0:7:12.04:0,12,159	1/1:2,0:2:0.47:1,0,0	1/1:8,0:8:5.56:15,6,0	0/0:4,0:4:7.84:0,8,81	0/1:6,2:7:0.57:1,0,8	0/0:9,0:9:17.08:0,17,213	1/1:3,0:3:8.54:48,9,0	1/1:5,2:7:1.07:4,1,0	0/1:3,0:3:0:0,0,0	./.	./.	0/0:2,0:2:5.99:0,6,62	1/1:3,0:2:0.89:2,1,0	0/0:5,0:4:9.03:0,9,118	1/1:3,1:4:5.38:38,5,0	./.
chr10	89537275	.	G	GAC	1428.93	PASS	AC=28;AF=0.583;AN=48;BaseQRankSum=5.942;DP=160;FS=7.693;HRun=0;HaplotypeScore=64.5533;InbreedingCoeff=0.6953;MQ=67.34;MQ0=6;MQRankSum=-5.309;QD=14.73;ReadPosRankSum=0.967;VQSLOD=2.4590;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,1:12:15.01:155,15,0	1/1:4,0:4:11.77:108,12,0	0/0:16,0:6:15.02:0,15,184	0/0:12,0:4:8.41:0,8,73	./.	./.	1/1:8,0:7:6.36:87,6,0	1/1:10,0:9:19.88:247,20,0	1/1:5,0:5:5.60:71,6,0	0/0:3,0:3:3:0,3,27	0/0:3,0:3:3:0,3,25	1/1:5,1:6:10.79:100,11,0	0/0:6,0:6:15.04:0,15,188	1/1:4,0:4:5.77:55,6,0	1/1:12,0:12:23.48:242,23,0	0/0:3,0:3:5.04:0,5,38	1/1:8,2:9:11.60:109,12,0	0/0:8,0:8:18.94:0,19,236	1/1:4,0:4:12.04:150,12,0	1/1:6,2:8:8.08:90,8,0	1/1:4,1:5:2.80:34,3,0	0/0:1,0:1:0:0,0,0	./.	0/0:2,0:2:5.99:0,6,60	1/1:4,0:3:2.80:34,3,0	0/0:6,0:6:15.04:0,15,178	1/1:4,1:5:9.03:118,9,0	./.
chr10	89537278	.	GC	G	1048.87	PASS	AC=30;AF=0.625;AN=48;BaseQRankSum=7.615;DP=166;FS=13.057;HRun=1;HaplotypeScore=58.1477;InbreedingCoeff=0.8197;MQ=78.53;MQ0=4;MQRankSum=-7.242;QD=11.04;ReadPosRankSum=0.494;VQSLOD=0.2203;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,1:10:14.60:85,15,0	1/1:4,0:4:11.44:64,11,0	0/0:17,0:7:17.91:0,18,151	0/0:15,0:7:7.64:0,8,79	./.	./.	1/1:5,0:5:11.79:74,12,0	1/1:3,9:11:29.43:202,29,0	1/1:4,0:4:11.87:79,12,0	0/0:5,0:5:15.01:0,15,135	0/0:4,0:4:8.98:0,9,74	1/1:5,0:6:11.73:71,12,0	0/0:6,0:6:14.91:0,15,114	1/1:3,0:3:5.93:40,6,0	1/1:12,1:13:36.47:204,36,0	0/0:4,0:4:5.98:0,6,47	1/1:11,0:10:17.26:104,17,0	0/0:9,0:9:20.99:0,21,192	1/1:0,4:4:11.90:83,12,0	1/1:2,6:8:11.24:58,11,0	1/1:5,0:5:5.93:39,6,0	1/1:2,0:2:5.93:39,6,0	./.	0/0:3,0:3:8.99:0,9,74	1/1:4,0:3:5.92:38,6,0	0/0:6,0:6:14.99:0,15,128	1/1:4,0:4:8.71:56,9,0	./.
chr10	89537305	.	TATGAATTCTAAAAGC	T	9691.45	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=11.660;DP=267;FS=8.767;HRun=0;HaplotypeScore=131.1122;InbreedingCoeff=0.9278;MQ=95.94;MQ0=0;MQRankSum=-12.103;QD=95.95;ReadPosRankSum=5.025;VQSLOD=3.8856;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:24.08:917,24,0	1/1:8,0:8:6.08:802,6,0	0/0:21,0:21:60.18:0,60,3399	0/0:13,0:13:32.91:0,33,1880	1/1:0,8:8:18.06:653,18,0	1/1:0,9:9:15.05:625,15,0	1/1:1,5:6:12.04:546,12,0	0/0:18,0:18:54.19:0,54,3485	1/1:0,7:7:18.06:819,18,0	0/0:15,0:15:45.15:0,45,3160	0/0:9,0:9:27.09:0,27,2032	1/1:1,6:7:18.06:819,18,0	0/0:11,0:11:33.11:0,33,2405	1/1:0,3:3:9.03:410,9,0	1/1:17,0:17:48.16:1900,48,0	0/0:8,0:8:24.08:0,24,1783	1/1:6,0:6:9.03:357,9,0	0/0:10,0:10:27.09:0,27,1956	0/0:9,0:9:27.09:0,27,1814	0/0:15,0:14:39.13:0,39,2753	1/1:1,6:7:9.03:410,9,0	1/1:0,9:9:18.06:752,18,0	0/0:4,0:4:12.04:0,12,872	0/0:6,0:6:18.06:0,18,1330	1/1:0,5:5:15.05:683,15,0	0/0:16,0:16:48.16:0,48,3518	0/0:9,0:9:27.09:0,27,1956	0/0:2,0:2:6.02:0,6,454
chr10	89537307	.	TGAATTCTAAAAGCAA	T	9411.63	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=11.841;DP=268;FS=6.485;HRun=0;HaplotypeScore=131.4492;InbreedingCoeff=0.9116;MQ=96.90;MQ0=0;MQRankSum=-12.053;QD=95.07;ReadPosRankSum=4.634;VQSLOD=4.3679;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:24.08:1052,24,0	1/1:1,7:8:21.07:945,21,0	0/0:21,0:21:59.57:0,60,3398	0/0:12,0:12:32.91:0,33,1896	1/1:8,0:8:1.10:514,1,0	1/1:9,0:9:15.05:525,15,0	1/1:5,0:5:12.04:466,12,0	0/0:18,0:18:54.19:0,54,3384	1/1:7,0:7:18.06:700,18,0	0/0:16,0:16:48.16:0,48,3532	0/0:10,0:10:30.10:0,30,2234	1/1:7,0:7:18.06:709,18,0	0/0:11,0:11:33.11:0,33,2359	1/1:3,0:3:9.03:350,9,0	1/1:1,16:17:48.16:2170,48,0	0/0:8,0:8:24.08:0,24,1810	1/1:2,4:6:9.03:410,9,0	0/0:10,0:10:27.09:0,27,1932	0/0:9,0:9:27.09:0,27,1806	0/0:15,0:14:39.13:0,39,2756	1/1:6,0:6:9.03:349,9,0	1/1:9,0:9:18.06:634,18,0	0/0:4,0:4:12.04:0,12,888	0/0:7,0:7:21.07:0,21,1494	1/1:5,0:5:15.05:587,15,0	0/0:16,0:16:48.16:0,48,3520	0/0:10,0:10:27.09:0,27,1938	0/0:2,0:2:6.02:0,6,454
chr10	89538384	.	A	AAC	1012.80	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.778;DP=549;FS=5.370;HRun=0;HaplotypeScore=85.7263;InbreedingCoeff=0.9776;MQ=66.42;MQ0=7;MQRankSum=3.133;QD=22.02;ReadPosRankSum=5.044;VQSLOD=4.0158;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:39.63:0,40,272	0/0:8,0:8:20.50:0,20,132	0/0:46,0:20:46.49:0,46,406	0/0:30,0:13:21.19:0,21,226	0/0:20,0:20:48.34:0,48,504	1/1:6,21:26:29.99:670,30,0	1/1:4,14:19:35.38:464,35,0	0/0:19,0:19:44.90:0,45,444	0/0:16,0:16:44.80:0,45,392	0/0:18,0:17:43.99:0,44,424	0/0:19,0:19:47.54:0,48,543	0/0:16,0:16:41.97:0,42,383	0/0:16,0:16:40.97:0,41,386	0/0:20,0:20:59.19:0,59,568	0/0:34,0:34:54.30:0,54,424	0/0:14,0:14:32.96:0,33,347	0/0:19,0:19:14.39:0,14,128	0/0:19,0:19:46.25:0,46,526	0/0:12,0:12:35.98:0,36,324	0/0:20,0:20:48.69:0,49,505	0/0:11,0:10:18.02:0,18,183	0/0:12,0:12:27.05:0,27,270	0/0:11,0:10:23.73:0,24,195	0/0:19,0:19:53.75:0,54,539	0/0:18,0:18:30.06:0,30,318	0/0:30,0:30:81.20:0,81,789	0/0:19,0:19:55.43:0,55,507	0/0:7,0:7:20.92:0,21,193
chr10	89538434	.	TTG	T	381.72	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=2.872;DP=406;FS=0.000;HRun=0;HaplotypeScore=62.7959;InbreedingCoeff=0.8747;MQ=67.21;MQ0=24;MQRankSum=-2.597;QD=8.48;ReadPosRankSum=0.353;VQSLOD=2.7585;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:3.01:36,3,0	1/1:5,2:7:12.03:141,12,0	0/0:34,0:15:41.34:0,41,576	0/0:35,0:13:14.50:0,14,311	0/0:15,0:15:27.03:0,27,343	0/0:15,0:14:32.01:0,32,502	0/0:14,0:14:36.12:0,36,578	0/0:30,0:30:83.95:0,84,1322	0/0:9,0:9:27.04:0,27,380	0/0:9,0:9:27.05:0,27,433	0/0:13,0:13:30.10:0,30,475	0/0:14,0:14:36.09:0,36,523	0/0:8,0:8:12.04:0,12,188	0/0:11,0:11:22.62:0,23,285	1/1:5,2:7:9.03:117,9,0	0/0:11,0:10:21.04:0,21,311	1/1:6,3:9:18.06:229,18,0	0/0:13,0:11:30.08:0,30,444	0/0:14,0:15:45.15:0,45,730	0/0:12,0:12:33.08:0,33,497	0/0:20,0:19:48.11:0,48,726	0/0:8,0:7:18.06:0,18,289	0/0:11,0:10:24.08:0,24,386	0/0:17,0:16:42.13:0,42,660	0/0:10,0:9:12.03:0,12,173	0/0:22,0:21:57.20:0,57,981	0/0:8,0:8:15.52:0,16,235	0/0:7,0:6:9.50:0,10,142
chr10	89538439	.	TACACAC	T	689.10	PASS	AC=26;AF=0.591;AN=44;BaseQRankSum=2.822;DP=405;FS=0.000;HRun=0;HaplotypeScore=82.1472;InbreedingCoeff=0.5973;MQ=60.38;MQ0=33;MQRankSum=0.125;QD=4.72;ReadPosRankSum=-0.296;VQSLOD=1.4239;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:6,0:6:6.02:75,6,0	./.	./.	1/1:12,1:13:7.56:84,8,0	0/0:15,0:14:1.84:0,2,17	0/0:17,0:16:2.81:0,3,21	./.	1/1:7,1:9:8.98:121,9,0	0/0:11,0:10:12.03:0,12,230	1/1:11,0:11:0.88:2,1,0	1/1:11,1:12:12.01:155,12,0	0/0:6,0:6:3.48:0,3,65	1/1:8,1:9:6.02:107,6,0	1/1:5,0:5:3.01:37,3,0	1/1:8,0:7:7.36:69,7,0	./.	1/1:16,0:13:0.88:1,1,0	./.	1/1:12,0:12:5.98:47,6,0	1/1:26,0:21:5.98:49,6,0	1/1:9,0:8:3.46:25,3,0	0/0:11,0:10:6:0,6,87	0/0:20,0:19:15.02:0,15,382	0/0:9,0:7:6:0,6,54	0/0:22,0:21:30.05:0,30,567	1/1:9,0:8:5.99:68,6,0	0/0:6,0:5:10.21:0,10,72
chr10	89539852	.	CAAA	C	2426.03	PASS	AB=0.951;AC=13;AF=0.232;AN=56;BaseQRankSum=3.390;DP=690;FS=7.530;HRun=15;HaplotypeScore=112.5769;InbreedingCoeff=0.8772;MQ=71.99;MQ0=11;MQRankSum=-2.781;QD=12.51;ReadPosRankSum=5.097;VQSLOD=1.3026;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:37:59.65:0,60,507	0/0:2,0:8:14.96:0,15,146	0/0:63,0:26:31.22:0,31,347	0/1:54,0:25:12.11:12,0,127	0/0:22,0:29:48.05:0,48,750	1/1:2,15:22:34.41:397,34,0	1/1:5,11:18:35.94:372,36,0	1/1:2,15:17:45.04:472,45,0	0/0:17,0:18:39.10:0,39,635	0/0:16,0:22:42.06:0,42,588	0/0:15,0:15:24.08:0,24,411	0/0:26,0:29:58.08:0,58,861	0/0:22,1:24:26.60:0,27,902	0/0:14,0:14:36.12:0,36,588	0/0:8,0:31:12.08:0,12,188	0/0:16,0:17:40.34:0,40,611	0/0:3,0:22:19.23:0,19,141	0/0:15,0:15:39.12:0,39,663	1/1:7,13:21:45.31:457,45,0	1/1:8,15:23:25.29:300,25,0	0/0:18,0:18:33.08:0,33,502	0/0:10,0:13:17.52:0,18,230	0/0:27,0:31:45.46:0,45,971	0/0:23,0:28:56.57:0,57,889	0/0:24,0:25:44.31:0,44,728	0/0:23,0:25:43.39:0,43,692	1/1:8,24:32:53.95:605,54,0	0/0:10,0:10:6.91:0,7,112
chr10	89540175	.	G	GA	7236.17	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=6.576;DP=483;FS=19.689;HRun=2;HaplotypeScore=51.1389;InbreedingCoeff=0.9879;MQ=47.03;MQ0=8;MQRankSum=-15.361;QD=24.36;ReadPosRankSum=-0.497;VQSLOD=3.0897;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:14:27.09:388,27,0	1/1:2,6:8:18.06:259,18,0	0/0:9,0:6:15.02:0,15,167	0/0:11,0:7:18.04:0,18,208	1/1:2,21:21:27.09:387,27,0	1/1:3,24:23:42.14:604,42,0	1/1:1,13:13:24.04:322,24,0	1/1:2,13:13:24.05:323,24,0	1/1:1,14:10:21.07:302,21,0	0/0:17,0:16:51.16:0,51,631	0/0:10,0:10:24.08:0,24,298	1/1:0,23:15:45.12:625,45,0	0/0:19,0:18:45.13:0,45,545	1/1:1,9:8:21:257,21,0	1/1:0,12:7:21.07:302,21,0	0/0:19,0:19:51.16:0,51,632	1/1:2,17:18:30.10:431,30,0	0/0:19,0:19:51.16:0,51,631	1/1:4,16:15:39.12:545,39,0	1/1:4,22:25:51.17:732,51,0	1/1:2,13:11:12:149,12,0	1/1:0,13:13:39.13:560,39,0	0/0:16,0:16:42.11:0,42,506	0/0:22,0:22:63.13:0,63,749	1/1:3,14:18:30.06:403,30,0	0/0:22,0:22:66.21:0,66,818	1/1:2,21:20:45.15:647,45,0	0/0:22,0:22:66.21:0,66,818
chr10	89541331	.	TAA	T	7613.48	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.166;DP=752;FS=1.025;HRun=3;HaplotypeScore=87.1384;InbreedingCoeff=0.9985;MQ=81.61;MQ0=1;MQRankSum=-6.024;QD=36.43;ReadPosRankSum=5.813;VQSLOD=4.4424;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,2532	0/0:6,0:6:18.05:0,18,317	0/0:19,0:19:54.09:0,54,899	0/0:22,0:21:60.20:0,60,1043	1/1:1,39:40:99:1514,99,0	0/0:19,0:19:57.17:0,57,1004	0/0:18,0:18:54.18:0,54,997	0/0:48,0:48:99:0,138,2318	1/1:1,24:25:51.17:780,51,0	0/0:26,0:26:75.20:0,75,1348	0/0:25,0:25:75.25:0,75,1418	1/1:1,36:36:81.27:1239,81,0	0/0:38,0:38:99:0,111,2017	1/1:0,33:33:87.30:1329,87,0	0/0:31,0:31:90.28:0,90,1616	0/0:33,1:34:53.40:0,53,1622	0/0:22,0:22:66.20:0,66,1193	0/0:19,0:19:57.15:0,57,1061	0/0:26,0:26:75.22:0,75,1325	0/0:29,0:29:87.30:0,87,1680	1/1:0,36:36:96.33:1468,96,0	1/1:1,24:25:48.16:734,48,0	0/0:25,0:25:75.23:0,75,1354	0/0:29,0:29:87.29:0,87,1648	1/1:0,13:13:36.12:551,36,0	0/0:33,0:33:96.29:0,96,1729	0/0:15,0:15:45.15:0,45,838	0/0:13,0:13:36.12:0,36,695
chr10	89544154	.	AAAAATCC	A	6095.59	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=14.169;DP=593;FS=3.141;HRun=0;HaplotypeScore=140.7259;InbreedingCoeff=0.8663;MQ=61.15;MQ0=0;MQRankSum=-12.311;QD=37.63;ReadPosRankSum=0.662;VQSLOD=4.8792;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,108,3793	0/0:9,0:9:24.08:0,24,913	0/1:33,0:29:9.79:10,0,1000	0/0:15,0:14:3.70:0,4,829	1/1:4,22:26:63.15:1458,63,0	0/0:21,0:21:60.19:0,60,2193	0/0:20,0:20:45.14:0,45,1557	0/0:23,0:23:60.21:0,60,2032	1/1:1,19:20:45.15:1082,45,0	0/0:23,0:23:66.22:0,66,2365	0/0:22,0:22:51.17:0,51,1592	1/1:4,19:23:48.13:1103,48,0	0/0:23,0:23:54.17:0,54,1857	1/1:3,13:16:27.09:649,27,0	0/0:19,0:19:54.19:0,54,1960	0/0:19,0:19:54.16:0,54,1789	0/0:25,0:25:66.21:0,66,2338	0/0:15,0:15:42.09:0,42,1409	0/0:25,0:25:60.21:0,60,2189	0/0:33,0:33:78.25:0,78,2725	1/1:5,5:10:5.95:90,6,0	1/1:2,14:16:42.06:905,42,0	0/0:20,0:20:48.16:0,48,1783	0/0:6,0:6:12.02:0,12,365	1/1:3,15:18:36.08:799,36,0	0/0:26,0:26:75.24:0,75,2523	0/0:30,0:30:81.28:0,81,3048	0/0:16,0:16:33.11:0,33,1251
chr10	89545007	.	TAACA	T	8861.97	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=11.898;DP=521;FS=4.927;HRun=0;HaplotypeScore=93.3117;InbreedingCoeff=0.9686;MQ=63.96;MQ0=2;MQRankSum=-0.374;QD=26.37;ReadPosRankSum=1.299;VQSLOD=4.5515;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,32:38:81.28:1316,81,0	1/1:3,10:13:36.11:562,36,0	0/0:18,0:13:18.06:0,18,408	0/0:20,0:17:26.28:0,26,451	1/1:4,21:25:57.13:884,57,0	1/1:3,11:14:24.08:390,24,0	1/1:5,10:15:21.07:342,21,0	1/1:16,12:27:30.02:357,30,0	1/1:8,5:13:12.04:195,12,0	0/0:26,0:26:48.16:0,48,1037	0/0:16,0:16:33.11:0,33,800	1/1:7,8:15:21.07:341,21,0	0/0:13,0:13:15.05:0,15,359	1/1:7,13:20:27.09:438,27,0	1/1:4,11:15:27.09:439,27,0	0/0:12,0:12:21.07:0,21,508	1/1:10,19:29:57.18:902,57,0	0/0:24,0:24:54.17:0,54,1211	1/1:11,14:25:42.13:628,42,0	1/1:4,13:17:39.08:604,39,0	1/1:1,3:4:6.02:98,6,0	1/1:1,9:10:21.07:341,21,0	0/0:12,0:12:11.94:0,12,291	0/0:14,0:14:30.05:0,30,626	1/1:11,13:23:24.08:390,24,0	0/0:21,0:21:39.12:0,39,881	1/1:10,21:31:39.13:634,39,0	0/0:9,0:9:21.07:0,21,510
chr10	89546621	.	C	CA	16596.10	PASS	AB=0.975;AC=54;AF=0.964;AN=56;BaseQRankSum=-3.936;DP=515;FS=3.198;HRun=4;HaplotypeScore=103.6014;InbreedingCoeff=-0.0381;MQ=53.64;MQ0=1;MQRankSum=-4.101;QD=32.23;ReadPosRankSum=1.946;VQSLOD=4.9245;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,17:25:61.45:844,61,0	1/1:0,8:8:24.08:327,24,0	0/1:18,0:11:47.19:47,0,93	0/1:18,1:12:62.23:107,0,62	1/1:6,11:17:48.09:586,48,0	1/1:6,19:24:63.19:843,63,0	1/1:6,19:25:69.22:917,69,0	1/1:8,18:25:69.23:941,69,0	1/1:4,18:22:57.19:776,57,0	1/1:4,8:12:30.09:396,30,0	1/1:4,4:8:21.06:273,21,0	1/1:4,16:19:51.17:695,51,0	1/1:6,13:19:54.16:714,54,0	1/1:3,20:23:66.22:894,66,0	1/1:4,18:21:57.19:768,57,0	1/1:4,17:21:60.20:818,60,0	1/1:6,14:20:47.82:603,48,0	1/1:7,10:17:48.15:631,48,0	1/1:7,6:13:21.04:255,21,0	1/1:6,13:18:45.15:606,45,0	1/1:7,13:20:48.11:615,48,0	1/1:10,5:15:24.03:288,24,0	1/1:1,10:11:33.11:440,33,0	1/1:8,19:27:75.20:961,75,0	1/1:2,10:12:36.10:465,36,0	1/1:4,16:20:60.14:770,60,0	1/1:4,18:21:60.20:814,60,0	1/1:6,3:9:15.02:204,15,0
chr10	89546641	.	TC	T	15125.22	PASS	AB=0.786;AC=54;AF=0.964;AN=56;BaseQRankSum=-3.573;DP=429;FS=0.000;HRun=1;HaplotypeScore=93.8625;InbreedingCoeff=-0.0354;MQ=59.52;MQ0=0;MQRankSum=-3.765;QD=35.26;ReadPosRankSum=2.592;VQSLOD=4.8894;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:48:600,48,0	1/1:0,8:8:24.04:310,24,0	0/1:7,3:9:64.86:133,0,65	0/1:8,3:6:8.19:123,0,8	1/1:1,12:13:29.88:302,30,0	1/1:1,20:21:57.15:773,57,0	1/1:1,22:23:60.11:781,60,0	1/1:5,16:21:63.18:808,63,0	1/1:0,18:18:48.16:661,48,0	1/1:1,7:8:21.07:292,21,0	1/1:0,6:6:14.97:162,15,0	1/1:2,14:15:45.15:627,45,0	1/1:1,16:17:51.17:709,51,0	1/1:0,16:16:45.15:628,45,0	1/1:1,15:15:42.14:581,42,0	1/1:0,21:21:60.20:833,60,0	1/1:2,14:16:42.13:564,42,0	1/1:1,15:16:45.11:603,45,0	1/1:0,13:13:39.13:545,39,0	1/1:1,16:16:44.89:493,45,0	1/1:0,16:16:42.05:526,42,0	1/1:0,11:11:30.10:419,30,0	1/1:0,12:12:29.99:366,30,0	1/1:1,23:24:63.12:834,63,0	1/1:0,10:10:30.01:374,30,0	1/1:0,19:19:57.18:774,57,0	1/1:1,19:20:60.16:800,60,0	1/1:1,12:13:36.12:503,36,0
chr10	89546759	.	GC	G	7504.89	PASS	AC=52;AF=1.000;AN=52;BaseQRankSum=-1.473;DP=282;FS=0.000;HRun=4;HaplotypeScore=42.6319;InbreedingCoeff=-0.0128;MQ=46.30;MQ0=4;MQRankSum=0.389;QD=27.39;ReadPosRankSum=1.716;VQSLOD=3.5419;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:29.13:355,29,0	1/1:0,3:3:9.03:108,9,0	./.	./.	1/1:0,12:12:24.54:285,25,0	1/1:5,6:10:21.05:241,21,0	1/1:2,11:12:24:266,24,0	1/1:0,5:5:14.91:155,15,0	1/1:0,5:5:15.05:180,15,0	1/1:1,13:13:36.04:413,36,0	1/1:0,14:13:27.08:323,27,0	1/1:0,9:9:24.05:274,24,0	1/1:0,9:9:24.07:285,24,0	1/1:0,10:10:24.07:284,24,0	1/1:0,9:9:21.06:251,21,0	1/1:0,10:10:27.08:321,27,0	1/1:0,16:16:39.08:450,39,0	1/1:0,20:20:48.15:573,48,0	1/1:1,2:2:6.02:72,6,0	1/1:0,3:3:6.01:72,6,0	1/1:2,10:12:15.05:180,15,0	1/1:0,7:7:21.03:234,21,0	1/1:0,13:12:27.08:323,27,0	1/1:4,11:14:30.09:359,30,0	1/1:0,11:11:30.09:354,30,0	1/1:0,13:12:36.11:431,36,0	1/1:0,11:11:33.10:395,33,0	1/1:0,12:12:27.08:320,27,0
chr10	89547028	.	AAT	A	58.46	PASS	AB=1.000;AC=7;AF=0.140;AN=50;BaseQRankSum=2.436;DP=265;FS=0.000;HRun=0;HaplotypeScore=42.5797;InbreedingCoeff=0.4350;MQ=57.00;MQ0=42;MQRankSum=-1.089;QD=2.09;ReadPosRankSum=1.313;VQSLOD=1.1480;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:30.59:0,31,177	0/0:3,0:3:5.97:0,6,68	0/0:24,0:6:14.97:0,15,172	0/0:16,0:8:15.02:0,15,194	0/0:2,0:2:4.98:0,5,24	1/1:9,9:11:5.62:131,6,0	1/1:2,0:1:2.94:18,3,0	0/0:10,0:1:2.94:0,3,18	0/0:6,0:3:2.94:0,3,18	0/0:12,0:9:23.94:0,24,268	0/0:2,0:1:2.92:0,3,17	0/0:7,0:6:9.09:0,9,38	0/0:7,0:6:12.04:0,12,202	0/0:5,0:3:5.74:0,6,31	0/0:6,0:3:5.45:0,5,14	0/0:8,0:5:9.03:0,9,152	0/0:29,0:19:11.09:0,11,139	0/0:24,0:20:48.14:0,48,762	0/0:6,0:3:8.79:0,9,53	0/0:8,0:7:14.71:0,15,91	./.	./.	./.	1/1:3,0:2:3.07:11,3,0	0/1:5,0:4:0.33:0,0,25	0/0:10,0:6:17.98:0,18,218	0/0:17,0:14:31.88:0,32,219	0/0:10,0:9:17.82:0,18,349
chr10	89547108	.	GA	G	98.08	PASS	AC=8;AF=0.250;AN=32;BaseQRankSum=2.655;DP=123;FS=3.668;HRun=8;HaplotypeScore=33.3750;InbreedingCoeff=0.5164;MQ=69.32;MQ0=13;MQRankSum=-3.535;QD=4.46;ReadPosRankSum=0.013;VQSLOD=-0.6602;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,6:8:11.97:99,12,0	1/1:0,2:2:3:29,3,0	0/0:6,0:6:11.60:0,12,85	0/0:7,0:3:3:0,3,28	./.	0/0:9,0:6:9.03:0,9,109	./.	./.	1/1:0,2:2:3:26,3,0	./.	0/0:2,0:1:3.01:0,3,36	./.	0/0:3,0:2:3.01:0,3,36	./.	./.	0/0:4,0:2:6.02:0,6,72	1/1:4,5:5:6.01:56,6,0	0/0:19,0:18:39.03:0,39,439	0/0:3,0:2:2.98:0,3,21	0/0:3,0:3:3.01:0,3,36	./.	./.	./.	0/0:3,0:2:6.02:0,6,72	./.	0/0:14,0:9:27.08:0,27,324	./.	0/0:6,0:6:15.05:0,15,181
chr10	89547127	.	A	AAAT	564.31	PASS	AC=16;AF=0.400;AN=40;BaseQRankSum=4.368;DP=102;FS=19.164;HRun=0;HaplotypeScore=32.2573;InbreedingCoeff=0.5825;MQ=80.03;MQ0=1;MQRankSum=-4.263;QD=21.70;ReadPosRankSum=1.202;VQSLOD=1.3704;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,5:7:21.06:324,21,0	./.	0/0:14,0:7:17.53:0,18,123	0/0:14,0:4:10.16:0,10,77	1/1:2,0:1:3.01:35,3,0	1/1:2,0:4:9.03:117,9,0	./.	./.	1/1:0,0:1:3.01:37,3,0	0/0:1,0:1:3.01:0,3,48	0/0:3,0:1:2.92:0,3,17	1/1:1,0:1:3:29,3,0	0/0:1,0:1:3.01:0,3,34	1/1:1,0:1:3.01:30,3,0	1/1:1,0:1:3.01:41,3,0	0/0:3,0:2:6.02:0,6,96	1/1:9,0:6:8.96:91,9,0	0/0:17,0:17:39.08:0,39,543	0/0:2,0:1:0.47:0,0,1	./.	./.	./.	./.	0/0:2,0:2:6.02:0,6,96	./.	0/0:6,0:6:18.06:0,18,274	0/0:1,0:1:2.98:0,3,21	0/0:9,0:9:27.09:0,27,433
chr10	89547139	.	T	TAAAC	657.60	PASS	AB=0.940;AC=17;AF=0.405;AN=42;BaseQRankSum=2.911;DP=123;FS=7.300;HRun=0;HaplotypeScore=41.8888;InbreedingCoeff=0.4142;MQ=71.75;MQ0=3;MQRankSum=-3.397;QD=12.41;ReadPosRankSum=0.407;VQSLOD=0.9393;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,5:7:21.07:411,21,0	1/1:1,0:1:2.60:10,3,0	0/0:17,0:6:6.16:0,6,31	0/1:24,0:9:12.35:21,0,12	0/1:1,0:1:0:0,0,0	0/1:5,0:6:11.96:134,0,12	./.	./.	1/1:0,0:1:3.01:31,3,0	0/0:3,0:3:9.02:0,9,114	0/0:3,0:1:2.92:0,3,17	1/1:1,0:1:0.47:1,0,0	0/0:2,0:2:3:0,3,25	1/1:1,0:1:3:26,3,0	1/1:1,0:1:3.01:34,3,0	0/0:2,0:2:6.02:0,6,114	1/1:8,0:7:14.90:123,15,0	0/0:19,0:19:47.61:0,48,628	0/0:2,0:1:1.25:0,1,3	./.	./.	./.	./.	0/0:2,0:2:6.02:0,6,116	0/0:3,0:2:1.36:0,1,3	0/0:6,0:6:15.05:0,15,273	./.	0/0:10,0:10:30.08:0,30,534
chr10	89547140	.	AAT	A	169.57	PASS	AB=1.000;AC=12;AF=0.286;AN=42;BaseQRankSum=3.317;DP=128;FS=0.000;HRun=0;HaplotypeScore=35.8558;InbreedingCoeff=0.3691;MQ=74.05;MQ0=3;MQRankSum=-0.935;QD=3.85;ReadPosRankSum=-1.793;VQSLOD=1.3999;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:7:17.19:17,0,160	0/0:1,0:1:3.01:0,3,45	0/0:18,0:6:8.54:0,9,59	0/1:30,0:10:13.22:39,0,13	1/1:0,1:1:3.01:46,3,0	0/0:6,0:6:15.03:0,15,180	./.	./.	1/1:1,0:1:2.98:21,3,0	0/0:3,0:3:9.03:0,9,174	0/0:4,0:2:6.02:0,6,88	1/1:0,1:1:3.01:46,3,0	0/0:2,0:2:3.01:0,3,56	1/1:0,1:1:3.01:45,3,0	0/0:1,0:1:3.01:0,3,58	0/0:2,0:2:6.02:0,6,95	0/0:7,0:6:14.92:0,15,278	0/0:19,0:19:48.07:0,48,820	0/0:2,0:1:0.89:0,1,2	./.	./.	./.	./.	0/0:2,0:2:6.02:0,6,116	1/1:1,2:2:6.02:83,6,0	0/0:5,0:5:15.05:0,15,206	./.	0/0:11,0:11:33.11:0,33,609
chr10	89547588	.	CT	C	1281.88	PASS	AB=0.613;AC=11;AF=0.229;AN=48;BaseQRankSum=4.325;DP=414;FS=5.590;HRun=12;HaplotypeScore=57.0602;InbreedingCoeff=0.7109;MQ=56.87;MQ0=5;MQRankSum=2.641;QD=10.96;ReadPosRankSum=2.311;VQSLOD=3.0902;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,25:37:0.54:340,1,0	1/1:2,4:6:13.99:99,14,0	0/0:19,0:11:5.99:0,6,53	0/0:18,1:9:4.01:0,4,41	0/0:12,0:12:21.51:0,22,215	1/1:3,7:10:19.96:145,20,0	1/1:4,9:13:19.95:145,20,0	./.	0/0:23,0:23:51.10:0,51,517	0/0:17,0:15:33.06:0,33,329	0/0:14,0:12:26.90:0,27,231	0/0:14,0:13:21.04:0,21,213	0/0:13,1:15:5.28:0,5,237	0/0:17,1:19:24.69:0,25,412	0/1:7,12:19:16.12:216,0,16	0/0:20,0:20:54.09:0,54,537	1/1:6,23:29:64.78:493,65,0	0/0:28,0:28:66.13:0,66,670	./.	./.	0/0:14,0:14:27.05:0,27,274	0/0:7,0:7:9.02:0,9,91	0/0:10,0:10:23.97:0,24,222	0/0:34,0:33:96.15:0,96,950	0/0:8,0:7:12.02:0,12,122	0/0:13,0:15:29.69:0,30,256	./.	0/0:8,0:7:8.85:0,9,84
chr10	89547771	.	GTTTA	G	1280.47	PASS	AB=0.880;AC=19;AF=0.339;AN=56;BaseQRankSum=0.445;DP=378;FS=58.734;HRun=0;HaplotypeScore=115.0846;InbreedingCoeff=-0.1163;MQ=55.82;MQ0=1;MQRankSum=-7.276;QD=6.74;ReadPosRankSum=-0.287;VQSLOD=0.3250;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,3456	0/0:6,0:6:18.06:0,18,406	0/0:8,0:7:18.53:0,19,468	0/0:10,0:7:18.06:0,18,493	0/1:13,1:14:23.68:24,0,955	0/1:15,1:16:17.71:18,0,939	0/1:11,1:12:32.74:33,0,663	1/1:0,1:1:3.01:63,3,0	0/0:11,0:11:30.10:0,30,789	0/0:14,1:13:25.90:0,26,637	0/1:19,2:20:99:120,0,766	0/1:7,3:10:99:158,0,535	0/1:14,2:16:80.52:81,0,953	0/1:7,0:7:18.64:19,0,467	0/0:15,0:15:45.15:0,45,1146	0/1:11,1:12:32.43:32,0,695	0/0:35,0:35:90.30:0,90,2454	0/0:19,0:17:48.16:0,48,1287	1/1:2,0:2:3.01:40,3,0	0/1:1,3:4:39.63:176,0,40	0/0:11,0:11:30.10:0,30,859	0/1:4,1:5:44.27:44,0,293	0/1:23,3:26:99:145,0,1299	0/0:11,0:11:33.11:0,33,891	0/1:10,1:10:74.48:74,0,525	0/1:25,2:27:47.47:47,0,1853	1/1:0,6:6:18.06:376,18,0	0/0:3,0:3:9.03:0,9,258
chr10	89547775	.	A	AG	1750.70	PASS	AB=0.883;AC=25;AF=0.446;AN=56;BaseQRankSum=7.807;DP=485;FS=112.422;HRun=4;HaplotypeScore=219.6303;InbreedingCoeff=-0.2813;MQ=50.46;MQ0=5;MQRankSum=-9.989;QD=5.05;ReadPosRankSum=-1.945;VQSLOD=-0.3849;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:43:99:0,101,1091	0/1:6,2:8:72.99:73,0,73	0/0:8,0:7:18.02:0,18,188	0/0:10,0:7:14.37:0,14,145	0/1:23,1:23:99:110,0,238	0/1:25,4:28:99:155,0,222	0/0:14,0:12:15.46:0,15,193	1/1:2,0:2:1.55:4,2,0	0/1:12,2:13:69.77:70,0,212	0/1:21,4:21:99:106,0,157	0/1:24,7:28:99:225,0,163	0/1:11,1:12:43.15:43,0,152	0/1:17,2:19:59.31:59,0,305	0/1:8,1:9:70.47:70,0,112	0/1:15,4:19:99:141,0,236	0/1:17,1:16:11.99:12,0,200	0/0:32,2:34:73.31:0,73,850	0/1:17,2:16:48.84:49,0,250	1/1:4,2:6:5.10:48,5,0	1/1:6,1:7:15.87:94,16,0	0/0:12,0:11:30.07:0,30,321	0/1:7,1:7:48.19:83,0,48	0/1:24,7:30:99:296,0,263	0/0:15,0:15:15.73:0,16,252	0/1:11,4:14:98.59:132,0,99	0/1:33,3:36:89.18:89,0,518	1/1:9,0:9:15.48:53,15,0	0/1:6,0:5:9.16:9,0,84
chr10	89547885	.	A	AG	603.85	PASS	AB=0.533;AC=21;AF=0.375;AN=56;BaseQRankSum=1.313;DP=338;FS=5.454;HRun=0;HaplotypeScore=43.5637;InbreedingCoeff=0.8605;MQ=62.38;MQ0=7;MQRankSum=0.298;QD=7.02;ReadPosRankSum=-0.094;VQSLOD=2.4779;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,1:11:17.89:137,18,0	1/1:3,0:3:5.90:40,6,0	0/0:19,0:9:7.33:0,7,112	0/0:20,0:10:17.19:0,17,118	1/1:9,0:9:11.26:78,11,0	0/0:12,0:11:14.84:0,15,107	0/0:22,0:22:40.80:0,41,283	0/0:18,0:17:35.94:0,36,305	1/1:10,1:11:18.53:144,19,0	0/0:26,0:26:41.93:0,42,359	0/0:16,0:13:25.06:0,25,194	0/1:1,7:7:0:0,0,0	0/0:9,0:8:14.09:0,14,90	1/1:7,0:7:14.17:102,14,0	1/1:8,0:7:6.80:45,7,0	0/0:14,0:14:23.80:0,24,177	1/1:6,0:5:6.57:30,7,0	1/1:13,0:13:13.35:111,13,0	0/0:18,0:16:26.95:0,27,232	0/0:11,0:11:22.16:0,22,172	0/0:7,0:7:17.99:0,18,153	1/1:4,0:4:4.70:47,5,0	0/0:11,0:11:17.72:0,18,145	0/0:9,0:9:12.26:0,12,92	1/1:4,0:4:8.96:69,9,0	0/0:16,0:14:23.66:0,24,163	0/0:10,0:10:24.30:0,24,182	0/0:14,0:14:33.80:0,34,253
chr10	89548488	.	A	AG	25021.82	PASS	AB=0.760;AC=54;AF=0.964;AN=56;BaseQRankSum=-5.451;DP=654;FS=5.869;HRun=1;HaplotypeScore=64.7117;InbreedingCoeff=-0.0075;MQ=68.14;MQ0=0;MQRankSum=-4.381;QD=38.26;ReadPosRankSum=4.444;VQSLOD=5.3804;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,35:37:99:1484,99,0	1/1:0,13:13:39.13:584,39,0	0/1:9,5:15:15.16:15,0,209	0/1:7,3:10:56.38:71,0,56	1/1:0,30:31:78.26:1164,78,0	1/1:0,29:29:69.23:1033,69,0	1/1:1,23:24:60.20:899,60,0	1/1:4,25:29:66.17:929,66,0	1/1:0,17:17:42.14:628,42,0	1/1:0,26:26:75.22:1068,75,0	1/1:0,18:18:48.16:719,48,0	1/1:0,24:24:66.22:988,66,0	1/1:0,24:24:69.23:1032,69,0	1/1:1,17:18:51.17:764,51,0	1/1:1,28:29:78.26:1168,78,0	1/1:0,17:17:45.15:674,45,0	1/1:2,45:47:99:1798,120,0	1/1:1,19:20:45.15:674,45,0	1/1:1,18:19:57.19:844,57,0	1/1:0,29:29:84.28:1257,84,0	1/1:0,32:32:90.30:1349,90,0	1/1:1,25:26:72.24:1074,72,0	1/1:1,26:27:72.24:1077,72,0	1/1:0,22:22:57.19:854,57,0	1/1:0,14:14:39.13:584,39,0	1/1:0,23:23:66.22:989,66,0	1/1:1,24:25:63.21:943,63,0	1/1:0,9:9:24.08:360,24,0
chr10	89548950	.	GA	G	3043.95	PASS	AC=32;AF=0.941;AN=34;BaseQRankSum=0.355;DP=130;FS=19.191;HRun=2;HaplotypeScore=91.3093;InbreedingCoeff=0.4401;MQ=41.02;MQ0=0;MQRankSum=-1.732;QD=26.24;ReadPosRankSum=1.523;VQSLOD=2.2143;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:8:14.98:169,15,0	./.	0/0:4,1:1:3.01:0,3,45	./.	./.	1/1:0,7:6:18.06:232,18,0	1/1:1,8:6:9.03:116,9,0	./.	1/1:0,5:3:9.03:116,9,0	./.	./.	1/1:1,10:10:27.09:342,27,0	1/1:1,9:10:27.09:347,27,0	1/1:1,5:6:12.04:154,12,0	1/1:0,14:12:36.12:463,36,0	1/1:0,6:6:18.06:232,18,0	1/1:0,5:5:9.03:116,9,0	1/1:0,5:5:15.05:194,15,0	1/1:0,2:1:3.01:39,3,0	./.	1/1:1,9:6:9.03:116,9,0	./.	./.	1/1:1,5:6:12.04:150,12,0	./.	1/1:0,6:5:15.05:194,15,0	1/1:0,4:4:12.04:155,12,0	./.
chr10	89548996	.	GA	G	3156.09	PASS	AC=40;AF=1.000;AN=40;DP=104;FS=0.000;HRun=1;HaplotypeScore=91.0320;InbreedingCoeff=-0.0733;MQ=26.11;MQ0=5;QD=33.58;VQSLOD=3.3504;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:3:9.03:125,9,0	./.	./.	./.	1/1:0,1:1:3.01:41,3,0	1/1:1,6:5:12.04:158,12,0	1/1:0,4:1:3.01:42,3,0	./.	1/1:0,3:3:9.03:125,9,0	1/1:0,4:3:9.03:124,9,0	1/1:0,1:1:2.92:17,3,0	1/1:0,10:10:30.10:413,30,0	1/1:0,10:10:30.10:418,30,0	1/1:0,7:7:21.07:292,21,0	1/1:0,10:9:27.09:376,27,0	1/1:0,10:10:30.10:417,30,0	1/1:1,1:2:5.89:37,6,0	1/1:0,3:3:9.03:125,9,0	1/1:0,3:1:3.01:42,3,0	./.	1/1:0,4:1:3.01:42,3,0	./.	1/1:0,2:2:5.98:61,6,0	./.	./.	1/1:0,4:4:12.04:167,12,0	1/1:0,4:4:12.04:167,12,0	1/1:0,1:1:3.01:42,3,0
chr10	89550772	.	TA	T	888.39	PASS	AB=0.717;AC=11;AF=0.196;AN=56;BaseQRankSum=4.780;DP=558;FS=25.698;HRun=15;HaplotypeScore=69.5882;InbreedingCoeff=0.4492;MQ=76.06;MQ0=3;MQRankSum=1.255;QD=6.58;ReadPosRankSum=1.752;VQSLOD=0.7197;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:23:50.50:0,50,405	0/0:11,0:11:11.76:0,12,218	0/0:28,1:19:18.08:0,18,92	0/0:17,0:13:17.82:0,18,132	0/1:9,22:33:6.77:324,0,7	0/0:14,0:14:26.98:0,27,233	0/0:29,0:31:59.66:0,60,500	0/0:22,0:24:44.74:0,45,366	1/1:4,7:11:12.21:77,12,0	0/0:17,1:18:10.54:0,11,200	0/0:20,0:20:35.98:0,36,310	0/1:3,11:16:2.83:96,0,3	0/0:13,0:14:34.64:0,35,279	1/1:1,8:9:17.65:111,18,0	0/0:17,0:21:45.95:0,46,337	0/0:21,1:22:25.69:0,26,340	0/0:26,2:30:12.28:0,12,441	0/0:19,0:20:23.79:0,24,297	0/0:19,1:20:13.72:0,14,242	0/0:21,3:25:26.16:0,26,312	0/1:7,1:7:12.33:47,0,12	0/1:7,12:19:57.74:134,0,58	0/0:16,0:19:32.83:0,33,273	0/0:15,3:19:12.29:0,12,342	1/1:6,17:25:1.64:248,2,0	0/0:23,0:24:44.69:0,45,366	0/0:16,1:20:22.54:0,23,304	0/1:13,1:14:2.51:3,0,201
chr10	89551910	.	T	TTCTGAA	13735.56	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.964;DP=720;FS=4.856;HRun=0;HaplotypeScore=170.9237;InbreedingCoeff=0.9998;MQ=77.10;MQ0=0;MQRankSum=-16.753;QD=90.96;ReadPosRankSum=-1.088;VQSLOD=5.4595;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,3308	0/0:10,0:10:30.10:0,30,756	0/0:25,0:25:72.24:0,72,1723	0/0:24,0:24:69.19:0,69,1697	1/1:13,15:34:78.11:2376,78,0	0/0:19,0:19:54.19:0,54,1350	0/0:13,0:13:39.13:0,39,992	0/0:23,0:23:63.18:0,63,1402	1/1:6,14:20:60.16:2098,60,0	0/0:36,0:36:99:0,102,2558	0/0:22,0:22:63.20:0,63,1550	1/1:5,10:17:48.12:1640,48,0	0/0:31,0:31:93.32:0,93,2343	1/1:2,17:20:57.15:2044,57,0	0/0:38,0:38:99:0,114,2857	0/0:28,0:28:81.26:0,81,2023	0/0:41,0:41:99:0,120,2979	0/0:22,0:22:66.16:0,66,1580	0/0:26,0:26:75.26:0,75,1918	0/0:36,0:36:99:0,99,2455	1/1:6,8:14:30.10:1038,30,0	1/1:9,15:26:66.23:2399,66,0	0/0:23,0:23:66.21:0,66,1628	0/0:24,0:24:69.24:0,69,1768	1/1:3,17:20:60.16:2141,60,0	0/0:28,0:28:81.28:0,81,2047	0/0:39,0:39:99:0,117,2838	0/0:14,0:14:42.14:0,42,1076
chr10	89552521	.	A	AT	789.15	PASS	AB=0.945;AC=12;AF=0.214;AN=56;BaseQRankSum=-2.402;DP=546;FS=10.615;HRun=13;HaplotypeScore=56.2728;InbreedingCoeff=0.3767;MQ=70.14;MQ0=5;MQRankSum=1.524;QD=4.99;ReadPosRankSum=-1.173;VQSLOD=0.6118;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,4:42:46.31:0,46,463	0/0:3,0:3:5.94:0,6,41	0/1:20,0:12:11.66:34,0,12	0/1:14,0:10:6.39:6,0,25	0/1:12,1:14:5.16:5,0,102	0/0:18,0:20:42.60:0,43,272	0/0:22,0:23:49.12:0,49,319	1/1:11,17:27:1.24:368,1,0	0/0:19,0:19:29.63:0,30,205	0/1:17,1:18:10.23:10,0,85	0/0:17,0:19:12.07:0,12,148	0/0:15,0:15:12.43:0,12,185	0/0:11,0:11:17.73:0,18,122	0/0:14,0:14:29.59:0,30,199	0/0:19,0:20:43.49:0,43,287	0/0:10,0:10:26.74:0,27,182	0/0:35,0:33:71.31:0,71,493	0/0:12,0:13:22.82:0,23,150	0/1:10,4:14:43.98:44,0,56	1/1:8,11:19:12.21:227,12,0	0/0:17,0:17:38.15:0,38,251	0/0:12,0:13:25.78:0,26,170	0/0:18,0:18:29.62:0,30,205	0/0:47,1:50:81:0,81,689	0/0:19,0:22:49.50:0,50,328	0/0:23,0:24:45.20:0,45,283	1/1:11,15:26:12.37:240,12,0	0/1:2,0:2:0:0,0,0
chr10	89554170	.	G	GA	2235.30	PASS	AB=0.767;AC=19;AF=0.339;AN=56;BaseQRankSum=-8.312;DP=472;FS=1.050;HRun=11;HaplotypeScore=47.5881;InbreedingCoeff=0.5902;MQ=58.47;MQ0=31;MQRankSum=-0.041;QD=11.23;ReadPosRankSum=-0.201;VQSLOD=2.5453;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,23:30:32.61:453,33,0	0/0:7,0:7:2.98:0,3,23	0/1:22,0:4:9.56:13,0,10	0/0:21,0:4:4.52:0,5,28	0/1:10,12:22:10.39:269,0,10	0/0:14,0:14:26.74:0,27,200	0/0:12,0:12:26.88:0,27,206	0/1:17,2:18:17.41:17,0,156	1/1:4,11:15:21.04:213,21,0	0/0:23,1:23:24.91:0,25,303	0/0:25,0:25:24.54:0,25,289	1/1:6,8:14:15.03:152,15,0	0/0:11,0:8:17.93:0,18,139	0/1:6,6:12:5.06:134,0,5	1/1:3,7:10:21.04:213,21,0	0/0:11,0:11:22.94:0,23,166	1/1:7,17:24:24.80:421,25,0	0/0:23,0:26:51.84:0,52,380	0/0:14,0:13:28.91:0,29,215	0/0:20,0:22:39.92:0,40,290	1/1:4,3:7:6.48:61,6,0	0/1:3,5:8:8.25:96,0,8	0/0:15,0:15:26.86:0,27,209	0/0:15,0:15:41.84:0,42,325	1/1:2,12:15:39.06:389,39,0	0/0:20,0:22:42.89:0,43,311	0/0:16,0:18:29.32:0,29,216	0/0:14,0:11:26.73:0,27,208
chr10	89554332	.	CAAAAA	C	981.77	PASS	AB=0.571;AC=13;AF=0.232;AN=56;BaseQRankSum=4.934;DP=389;FS=3.675;HRun=18;HaplotypeScore=72.7359;InbreedingCoeff=0.6942;MQ=56.79;MQ0=21;MQRankSum=-4.032;QD=14.44;ReadPosRankSum=4.380;VQSLOD=-0.6974;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:33:52.96:0,53,632	0/0:2,0:3:5.05:0,5,19	0/0:14,0:7:11.78:0,12,215	0/0:7,0:1:3.01:0,3,54	1/1:6,8:15:15.06:223,15,0	0/0:10,0:16:27.09:0,27,642	0/0:13,0:15:30.99:0,31,685	0/0:27,0:31:69.24:0,69,1636	1/1:6,12:18:32.93:465,33,0	0/0:14,0:14:24.08:0,24,592	0/0:10,0:8:6.02:0,6,94	1/1:2,6:6:8.85:131,9,0	0/0:13,0:13:21.01:0,21,387	1/1:3,3:6:8.99:131,9,0	0/0:13,0:13:14.94:0,15,326	0/0:10,0:9:18.06:0,18,437	0/0:9,0:14:27:0,27,270	0/0:16,0:18:21.07:0,21,492	0/0:23,0:22:51.16:0,51,1152	0/0:17,0:17:30.10:0,30,678	1/1:4,5:8:1.32:80,1,0	0/1:1,2:4:29.35:75,0,29	0/0:7,0:7:11.91:0,12,299	0/0:7,0:7:12:0,12,203	1/1:4,3:6:2.81:43,3,0	0/0:11,0:13:24.08:0,24,514	0/0:9,0:16:24.08:0,24,586	0/0:14,0:14:39.12:0,39,842
chr10	89554491	.	G	GT	1607.74	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.981;DP=477;FS=0.507;HRun=0;HaplotypeScore=61.9122;InbreedingCoeff=0.9476;MQ=73.40;MQ0=1;MQRankSum=0.163;QD=18.69;ReadPosRankSum=-1.091;VQSLOD=5.0975;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:54.18:0,54,730	0/0:2,0:2:6.02:0,6,84	0/0:21,0:17:42.09:0,42,516	0/0:10,0:10:15.01:0,15,290	0/0:21,0:21:60.19:0,60,820	0/0:16,0:16:41.39:0,41,232	0/0:11,0:11:26.42:0,26,173	1/1:11,24:35:51.81:773,52,0	0/0:13,0:13:39.12:0,39,510	0/0:23,0:23:69.23:0,69,964	0/0:22,0:22:60.19:0,60,822	0/0:14,0:13:36.12:0,36,497	0/0:20,0:20:57.11:0,57,738	0/0:18,0:18:45.15:0,45,623	0/0:19,0:18:54.18:0,54,742	0/0:12,0:12:36.10:0,36,472	0/0:19,0:19:54.18:0,54,753	0/0:23,0:23:60.19:0,60,813	1/1:5,7:12:20.07:223,20,0	1/1:2,12:15:26.35:302,26,0	0/0:13,0:13:36.08:0,36,468	0/0:19,0:19:48.15:0,48,654	0/0:18,0:18:50.84:0,51,678	0/0:8,0:8:18.06:0,18,251	0/0:19,0:19:57.19:0,57,781	0/0:25,0:25:72.23:0,72,977	1/1:5,18:23:44.39:469,44,0	0/0:3,0:3:9.03:0,9,124
chr10	89554906	.	AGTTTTTGTTTTT	A	5363.70	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.401;DP=497;FS=1.810;HRun=0;HaplotypeScore=167.5848;InbreedingCoeff=0.9699;MQ=64.93;MQ0=1;MQRankSum=-9.793;QD=58.94;ReadPosRankSum=1.114;VQSLOD=4.8139;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.29:0,87,4904	0/0:8,0:8:21.07:0,21,1128	0/0:18,0:14:33.10:0,33,1316	0/0:12,0:7:17.99:0,18,584	1/1:6,15:19:23.95:521,24,0	0/0:28,0:28:66.23:0,66,3557	0/0:13,0:13:33.11:0,33,1829	0/0:28,0:28:45.13:0,45,2180	1/1:1,15:16:42.14:1497,42,0	0/0:27,0:27:69.24:0,69,3758	0/0:22,0:22:57.20:0,57,3001	1/1:2,15:17:42.14:1497,42,0	0/0:9,0:9:27.09:0,27,1578	1/1:4,8:12:21.07:749,21,0	0/0:16,0:16:48.16:0,48,2818	0/0:13,0:13:33.11:0,33,1867	0/0:25,0:25:54.18:0,54,2971	0/0:19,0:19:48.16:0,48,2607	0/0:21,0:21:45.15:0,45,2383	0/0:30,0:30:74.86:0,75,4122	1/1:4,4:8:5.98:60,6,0	1/1:1,4:5:12:292,12,0	0/0:20,0:20:44.91:0,45,2488	0/0:10,0:10:24.08:0,24,1284	1/1:2,10:12:21.07:749,21,0	0/0:20,0:20:45.15:0,45,2431	0/0:23,0:23:60.20:0,60,3370	0/0:11,0:11:33.11:0,33,1867
chr10	89556806	.	T	TA	3039.03	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-7.663;DP=400;FS=18.353;HRun=3;HaplotypeScore=38.9738;InbreedingCoeff=0.9266;MQ=69.53;MQ0=1;MQRankSum=-0.604;QD=31.01;ReadPosRankSum=2.520;VQSLOD=1.7103;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.18:0,66,777	0/0:8,0:8:24.03:0,24,262	0/0:7,0:7:14.96:0,15,137	0/0:5,0:4:5.90:0,6,47	1/1:4,22:26:60.16:805,60,0	0/0:22,0:22:60.17:0,60,710	0/0:8,0:8:24.07:0,24,288	0/0:28,0:28:78.22:0,78,918	1/1:0,12:12:24.08:336,24,0	0/0:16,0:16:45.14:0,45,540	0/0:17,0:17:48.15:0,48,576	1/1:0,19:19:54.18:754,54,0	0/0:10,0:10:27.08:0,27,324	1/1:0,8:8:21.07:286,21,0	0/0:17,0:17:48.14:0,48,566	0/0:12,0:12:36.10:0,36,421	0/0:18,0:18:47.89:0,48,572	0/0:19,0:19:51.13:0,51,595	0/0:18,0:18:51.16:0,51,609	0/0:8,0:8:24.06:0,24,276	1/1:1,6:7:15.05:210,15,0	1/1:0,2:2:3.01:42,3,0	0/0:5,0:5:15.05:0,15,180	0/0:4,0:4:8.98:0,9,92	1/1:1,23:24:57.19:796,57,0	0/0:22,0:22:57.16:0,57,674	0/0:28,0:28:78.24:0,78,935	0/0:8,0:8:24.07:0,24,287
chr10	89558552	.	A	ATG	11794.83	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-15.594;DP=808;FS=0.297;HRun=0;HaplotypeScore=86.6761;InbreedingCoeff=0.9999;MQ=75.98;MQ0=0;MQRankSum=-7.376;QD=54.10;ReadPosRankSum=5.033;VQSLOD=5.1655;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,2112	0/0:13,0:13:39.13:0,39,633	0/0:27,0:27:74.82:0,75,1110	0/0:27,0:27:81.20:0,81,1230	1/1:0,26:27:75.26:1523,75,0	0/0:24,0:24:69.22:0,69,1097	0/0:18,0:18:54.18:0,54,881	0/0:40,0:40:99:0,120,1955	1/1:1,33:34:93.32:1888,93,0	0/0:25,0:25:69.20:0,69,1058	0/0:25,0:25:75.26:0,75,1223	1/1:0,27:27:72.25:1463,72,0	0/0:32,0:32:96.31:0,96,1541	1/1:1,38:39:99:2179,108,0	0/0:42,0:42:99:0,126,2052	0/0:32,1:33:35.38:0,35,1456	0/0:23,0:23:69.21:0,69,1099	0/0:13,0:13:39.11:0,39,609	0/0:29,0:29:87.30:0,87,1417	0/0:37,0:37:99:0,108,1731	1/1:1,41:43:99:2194,108,0	1/1:1,29:30:81.28:1635,81,0	0/0:26,0:26:72.23:0,72,1136	0/0:28,0:28:84.29:0,84,1370	1/1:0,17:18:45.15:913,45,0	0/0:31,0:31:93.32:0,93,1516	0/0:37,0:37:99:0,111,1745	0/0:15,0:15:45.15:0,45,734
chr10	89558908	.	TACACACACACACACACACACACACAC	T	5486.87	PASS	AB=0.738;AC=13;AF=0.232;AN=56;BaseQRankSum=6.335;DP=587;FS=29.992;HRun=0;HaplotypeScore=324.4629;InbreedingCoeff=0.6748;MQ=65.92;MQ0=18;MQRankSum=-5.117;QD=38.10;ReadPosRankSum=1.899;VQSLOD=2.1941;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:44:45.15:0,45,1430	0/0:2,0:4:6.02:0,6,132	0/0:51,0:21:6.02:0,6,266	0/0:60,0:24:24.08:0,24,1011	1/1:7,3:10:5.88:405,6,0	0/0:9,0:15:11.38:0,11,176	0/0:19,0:21:17.40:0,17,271	0/0:17,0:17:18.05:0,18,958	0/1:20,10:30:99:1702,0,185	0/0:19,0:19:27.09:0,27,1784	0/0:5,0:4:3.01:0,3,203	1/1:12,8:20:21.07:1413,21,0	0/0:13,0:13:21.07:0,21,1392	1/1:9,8:17:12.04:757,12,0	0/0:19,0:24:17.80:0,18,343	0/0:18,0:19:22.50:0,22,1829	0/0:10,0:15:10.28:0,10,286	0/0:15,0:20:32.78:0,33,2836	0/0:17,0:18:26.76:0,27,1397	0/0:11,0:15:12.04:0,12,436	1/1:29,0:29:0.94:1,1,0	1/1:14,8:22:5.57:402,6,0	0/0:14,0:14:21.07:0,21,1960	0/0:21,0:28:23.09:0,23,1838	1/1:10,5:15:12.04:807,12,0	0/0:19,0:19:32.95:0,33,2430	0/0:13,0:13:21.52:0,22,858	0/0:4,0:4:3.01:0,3,59
chr10	89560590	.	TAA	T	2116.56	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.185;DP=530;FS=6.817;HRun=12;HaplotypeScore=67.0103;InbreedingCoeff=0.9484;MQ=55.34;MQ0=10;MQRankSum=1.635;QD=19.24;ReadPosRankSum=2.544;VQSLOD=2.8007;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:92.38:0,92,1251	0/0:2,0:3:8.52:0,9,98	0/0:11,0:3:8.47:0,8,74	0/0:10,0:4:9.01:0,9,113	1/1:5,21:26:50.84:570,51,0	0/0:0,0:16:29.94:0,30,105	0/0:0,0:9:22.46:0,22,79	0/0:35,0:29:62.66:0,63,875	1/1:1,5:6:15.03:153,15,0	0/0:21,0:21:54.12:0,54,757	0/0:17,0:17:48.14:0,48,678	1/1:2,11:13:30.07:305,30,0	0/0:19,0:22:66.14:0,66,902	1/1:2,15:16:30.06:305,30,0	0/0:17,0:20:46.35:0,46,575	0/0:25,0:24:63.20:0,63,916	0/0:26,0:28:74.72:0,75,1060	0/0:22,0:22:48.78:0,49,662	0/0:18,0:18:38.83:0,39,502	0/0:24,0:24:60.19:0,60,874	1/1:2,8:11:20.99:202,21,0	1/1:0,4:5:14.77:134,15,0	0/0:9,0:10:26.06:0,26,331	0/0:4,0:4:9.03:0,9,134	1/1:4,25:30:59.60:644,60,0	0/0:24,0:25:59.13:0,59,796	0/0:34,0:35:86.20:0,86,1179	0/0:23,0:24:65.10:0,65,805
chr10	89562038	.	TTTTTTC	T	1922.87	PASS	AB=0.901;AC=13;AF=0.232;AN=56;BaseQRankSum=10.477;DP=593;FS=3.538;HRun=0;HaplotypeScore=128.0054;InbreedingCoeff=0.6478;MQ=61.66;MQ0=3;MQRankSum=-6.983;QD=15.26;ReadPosRankSum=-1.176;VQSLOD=3.0371;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,111,2880	0/0:10,0:10:27.08:0,27,706	0/1:16,0:11:12.78:13,0,99	0/0:13,0:5:9:0,9,126	0/1:24,9:33:81.38:322,0,81	0/0:20,0:20:57.18:0,57,1475	0/0:19,0:19:54.14:0,54,1262	0/0:43,0:41:99:0,109,2625	1/1:4,10:14:32.05:493,32,0	0/0:23,0:23:54.08:0,54,1618	0/0:17,0:17:45.02:0,45,995	1/1:20,4:23:28.51:523,29,0	0/0:12,0:12:33.10:0,33,856	0/1:10,1:11:17.65:196,0,18	0/0:35,0:35:99:0,99,2727	0/0:15,0:15:45.15:0,45,1330	0/0:36,0:36:99:0,102,2714	0/0:22,0:22:63.15:0,63,1452	0/0:23,0:23:58.01:0,58,1550	0/0:18,0:18:54.17:0,54,1420	1/1:7,1:8:2.13:9,2,0	1/1:9,1:10:16.94:258,17,0	0/0:26,0:26:51.14:0,51,1793	0/0:23,0:23:60.19:0,60,1639	1/1:7,3:9:20.64:283,21,0	0/0:23,0:23:66.16:0,66,1417	0/0:29,0:29:81.75:0,82,2352	0/0:18,0:17:36.38:0,36,1162
chr10	89562043	.	TC	T	1004.92	PASS	AB=0.885;AC=12;AF=0.214;AN=56;BaseQRankSum=12.200;DP=586;FS=12.378;HRun=1;HaplotypeScore=72.6114;InbreedingCoeff=0.6948;MQ=59.96;MQ0=6;MQRankSum=-5.966;QD=9.05;ReadPosRankSum=-1.312;VQSLOD=-0.3979;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:60.49:0,60,1043	0/0:9,0:9:24.05:0,24,261	1/1:13,1:9:6.04:50,6,0	0/0:11,1:5:8.37:0,8,62	0/1:30,0:30:60.09:129,0,60	0/0:20,0:20:31:0,31,547	0/0:18,0:18:48.06:0,48,492	0/0:42,0:39:71.17:0,71,993	1/1:13,0:13:21.84:281,22,0	0/0:23,0:23:57.38:0,57,594	0/0:16,0:15:34.38:0,34,346	1/1:20,3:22:25.50:331,26,0	0/0:13,0:13:33.83:0,34,327	0/1:7,3:10:14.93:107,0,15	0/0:33,0:33:95.76:0,96,1009	0/0:16,0:16:45.05:0,45,479	0/0:38,0:38:99:0,104,1046	0/0:24,0:24:67.07:0,67,624	0/0:21,1:22:42.44:0,42,564	0/0:22,0:22:59.34:0,59,603	0/0:5,0:5:4.97:0,5,18	1/1:11,0:11:5.61:120,6,0	0/0:25,0:25:61.27:0,61,680	0/0:24,0:24:56.27:0,56,571	1/1:9,1:9:9.80:154,10,0	0/0:24,0:23:65.29:0,65,658	0/0:30,0:30:78.01:0,78,856	0/0:16,0:15:25.84:0,26,406
chr10	89562052	.	C	CT	1105.96	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=9.379;DP=569;FS=5.246;HRun=7;HaplotypeScore=70.0682;InbreedingCoeff=0.8813;MQ=58.80;MQ0=8;MQRankSum=-6.972;QD=11.06;ReadPosRankSum=-0.594;VQSLOD=2.0733;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,118,1181	0/0:7,0:7:18.04:0,18,184	0/1:10,0:5:4.86:5,0,5	0/0:11,0:4:5.99:0,6,52	1/1:9,13:22:22.21:195,22,0	0/0:20,0:20:44.75:0,45,451	0/0:19,0:19:51.07:0,51,503	0/0:39,0:36:84.17:0,84,850	1/1:1,13:14:29.95:285,30,0	0/0:24,0:24:60.13:0,60,610	0/0:17,0:16:45.09:0,45,452	1/1:13,12:24:38.13:321,38,0	0/0:13,0:13:30.93:0,31,299	1/1:9,1:10:12.64:102,13,0	0/0:30,0:30:84.17:0,84,848	0/0:17,0:17:48.10:0,48,488	0/0:34,0:34:86.65:0,87,885	0/0:25,0:25:66.14:0,66,672	0/0:25,0:24:62.96:0,63,618	0/0:25,0:25:69.15:0,69,701	1/1:2,1:3:1.25:3,1,0	1/1:7,1:8:21.04:230,21,0	0/0:26,0:25:39.67:0,40,575	0/0:24,0:24:63.04:0,63,627	1/1:3,5:7:15.01:150,15,0	0/0:21,0:20:48.11:0,48,490	0/0:32,0:32:81.17:0,81,824	0/0:15,0:14:36.06:0,36,359
chr10	89562056	.	TTTC	T	159.06	PASS	AB=0.940;AC=10;AF=0.179;AN=56;BaseQRankSum=9.705;DP=575;FS=17.404;HRun=0;HaplotypeScore=92.8477;InbreedingCoeff=0.2473;MQ=58.54;MQ0=8;MQRankSum=-6.507;QD=1.64;ReadPosRankSum=0.652;VQSLOD=0.2712;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,2437	0/0:7,0:7:21.07:0,21,385	1/1:12,0:5:3.34:24,3,0	0/0:16,0:5:8.86:0,9,60	0/1:19,0:19:5.56:6,0,44	0/0:19,0:19:24.29:0,24,825	0/0:20,0:20:57.14:0,57,998	0/0:38,0:35:99:0,99,1786	0/1:14,0:14:22.28:22,0,39	0/0:24,0:24:72.20:0,72,1270	0/0:19,0:18:54.12:0,54,898	0/1:21,2:23:51.95:97,0,52	0/0:13,0:13:36.08:0,36,609	0/1:8,2:10:20.79:60,0,21	0/0:30,0:30:90.25:0,90,1699	0/0:20,0:20:57.16:0,57,1036	0/0:37,0:37:99:0,102,1810	0/0:24,0:24:69.18:0,69,1288	0/0:26,0:25:57.59:0,58,1046	0/0:25,0:25:75.23:0,75,1436	0/1:3,0:3:0.03:0,0,0	1/1:8,0:8:2.64:68,3,0	0/0:25,0:24:42.73:0,43,1152	0/0:25,0:25:66.23:0,66,1321	0/1:7,1:7:12.51:13,0,13	0/0:19,0:18:48.14:0,48,936	0/0:33,0:33:87.05:0,87,1467	0/0:13,0:12:36.06:0,36,571
chr10	89562645	.	A	AC	7080.18	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-13.977;DP=686;FS=5.837;HRun=0;HaplotypeScore=62.0796;InbreedingCoeff=0.9997;MQ=90.88;MQ0=0;MQRankSum=-1.578;QD=43.98;ReadPosRankSum=2.574;VQSLOD=5.3475;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.28:0,90,1239	0/0:10,0:10:30.10:0,30,419	0/0:31,0:31:87.26:0,87,1159	0/0:24,0:24:66.11:0,66,829	1/1:0,30:30:81.28:1292,81,0	0/0:23,0:23:66.20:0,66,905	0/0:35,0:35:99:0,105,1468	0/0:36,0:36:99:0,108,1510	1/1:0,21:21:60.20:959,60,0	0/0:27,0:27:81.27:0,81,1120	0/0:17,0:17:51.17:0,51,712	1/1:0,27:27:78.27:1247,78,0	0/0:27,0:27:81.27:0,81,1131	1/1:1,18:20:57.19:897,57,0	0/0:28,0:28:84.28:0,84,1174	0/0:23,0:23:69.23:0,69,965	0/0:29,0:28:87.29:0,87,1216	0/0:9,0:9:27.09:0,27,378	0/0:28,0:28:81.26:0,81,1116	0/0:31,0:31:93.31:0,93,1301	1/1:0,18:18:54.18:863,54,0	1/1:2,16:18:42.14:671,42,0	0/0:19,0:19:54.18:0,54,755	0/0:18,0:18:51.15:0,51,694	1/1:0,27:27:72.25:1150,72,0	0/0:26,0:26:78.25:0,78,1076	0/0:41,0:41:99:0,123,1702	0/0:13,0:13:39.11:0,39,527
chr10	89571710	.	CAAAA	C	1983.63	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=2.763;DP=617;FS=1.697;HRun=17;HaplotypeScore=118.7332;InbreedingCoeff=0.9586;MQ=75.01;MQ0=2;MQRankSum=-0.434;QD=18.54;ReadPosRankSum=7.030;VQSLOD=1.4398;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,25:35:22.97:760,23,0	1/1:4,7:13:20.38:234,20,0	0/0:42,0:22:21.47:0,21,215	0/0:26,0:16:21.63:0,22,201	0/0:24,0:24:54.16:0,54,948	0/0:2,0:15:13.31:0,13,258	0/0:7,0:19:27.09:0,27,501	0/0:17,0:22:42.38:0,42,424	0/0:12,0:17:39.12:0,39,606	0/0:18,0:22:42.03:0,42,639	0/0:12,0:16:39.04:0,39,670	0/0:20,0:19:21.06:0,21,355	0/0:12,0:13:36.11:0,36,600	0/0:27,0:27:69.07:0,69,1150	1/1:8,17:26:22.26:460,22,0	0/0:13,0:16:42.06:0,42,768	1/1:11,20:33:35.61:689,36,0	0/0:11,0:14:33.02:0,33,580	0/0:17,0:18:29.18:0,29,272	0/0:20,0:30:53.92:0,54,586	0/0:3,0:6:6.02:0,6,94	0/0:18,0:24:63.03:0,63,1012	0/0:17,0:21:41.80:0,42,658	0/0:19,0:20:39.10:0,39,674	0/0:17,0:24:54.17:0,54,1046	0/0:20,0:23:48.14:0,48,790	0/0:12,0:18:36.08:0,36,487	0/0:27,0:30:63.12:0,63,1068
chr10	89572627	.	A	AGTG	6255.22	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-12.720;DP=683;FS=9.166;HRun=0;HaplotypeScore=95.8000;InbreedingCoeff=0.9836;MQ=83.76;MQ0=0;MQRankSum=-3.001;QD=48.12;ReadPosRankSum=2.999;VQSLOD=6.9984;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,42:50:99:2267,105,0	1/1:1,8:9:27.09:569,27,0	0/0:21,0:22:45.59:0,46,677	0/0:18,0:18:35.96:0,36,596	0/0:28,0:28:84.26:0,84,1302	0/0:23,0:23:69.24:0,69,1108	0/0:31,0:31:81.28:0,81,1295	0/0:27,0:27:72.23:0,72,1111	0/0:23,0:23:60.16:0,60,935	0/0:31,0:30:81.26:0,81,1258	0/0:16,0:16:45.15:0,45,721	0/0:28,0:28:75.22:0,75,1157	0/0:15,0:15:42.14:0,42,675	0/0:25,0:25:75.26:0,75,1201	1/1:2,26:29:60.21:1322,60,0	0/0:21,0:20:54.18:0,54,865	1/1:7,35:42:96.33:2098,96,0	0/0:22,0:22:63.21:0,63,1012	0/0:15,0:15:45.10:0,45,651	0/0:14,0:14:39.13:0,39,626	0/0:44,0:44:99:0,126,1948	0/0:22,0:22:63.21:0,63,1009	0/0:14,0:14:39.12:0,39,602	0/0:27,0:27:78.27:0,78,1250	0/0:19,0:19:51.17:0,51,819	0/0:29,0:29:84.29:0,84,1349	0/0:35,0:35:99:0,102,1557	0/0:3,0:3:9.03:0,9,142
chr10	89573130	.	TACCCCCCC	T	4012.96	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.812;DP=315;FS=3.766;HRun=0;HaplotypeScore=82.2742;InbreedingCoeff=0.8033;MQ=77.55;MQ0=0;MQRankSum=-10.377;QD=60.80;ReadPosRankSum=2.878;VQSLOD=3.4216;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:60.21:1704,60,0	1/1:0,4:4:9.03:248,9,0	0/0:12,0:9:27.03:0,27,718	0/0:10,0:10:7.29:0,7,654	0/0:5,0:5:9.01:0,9,248	0/0:13,0:13:39.11:0,39,1532	0/0:27,0:27:75.22:0,75,2858	0/0:17,0:17:45.13:0,45,1768	0/0:10,0:10:19.88:0,20,637	0/0:3,0:3:9.03:0,9,391	0/0:1,0:1:3.01:0,3,130	0/0:10,0:10:21.06:0,21,637	0/0:11,0:11:27.09:0,27,1125	0/0:11,0:11:30.10:0,30,1104	1/1:1,15:16:39.13:1116,39,0	0/0:7,0:7:21.07:0,21,910	1/1:0,19:19:33.11:945,33,0	0/0:14,0:14:39.09:0,39,1433	0/0:13,0:13:36.08:0,36,1178	0/0:5,0:5:15.04:0,15,516	0/0:18,0:18:36.11:0,36,1195	0/0:2,0:2:4.26:0,4,77	0/0:5,0:5:15.04:0,15,541	0/0:15,0:15:45.10:0,45,1603	0/0:5,0:5:3.01:0,3,113	0/0:11,0:11:33.07:0,33,1095	0/0:11,0:11:27.09:0,27,1108	0/0:12,0:12:36.12:0,36,1553
chr10	89573131	.	A	AC	1091.39	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-6.640;DP=312;FS=1.503;HRun=7;HaplotypeScore=55.9063;InbreedingCoeff=0.8138;MQ=77.55;MQ0=0;MQRankSum=1.823;QD=17.60;ReadPosRankSum=1.032;VQSLOD=3.4311;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:39.18:0,39,120	0/0:4,0:4:4.07:0,4,13	0/0:12,0:9:9.65:0,10,164	0/0:11,0:10:16.55:0,17,141	1/1:3,2:5:5.76:72,6,0	0/0:13,0:13:33.05:0,33,316	0/0:26,0:26:60.08:0,60,579	0/0:17,0:17:39.04:0,39,370	1/1:1,8:9:18.06:217,18,0	0/0:3,0:3:6:0,6,58	0/0:1,0:1:3:0,3,29	1/1:3,8:11:15.05:181,15,0	0/0:9,0:9:24.03:0,24,231	1/1:0,11:11:30.09:362,30,0	0/0:15,0:15:26.48:0,26,81	0/0:7,0:7:21.03:0,21,203	0/0:19,0:19:22.41:0,22,69	0/0:13,0:13:27.04:0,27,261	0/0:13,0:13:27.03:0,27,257	0/0:5,0:5:12.02:0,12,116	1/1:4,16:20:30.09:362,30,0	1/1:0,2:2:3.48:37,3,0	0/0:6,0:6:12.02:0,12,116	0/0:15,0:15:27.03:0,27,261	1/1:0,4:4:3.01:36,3,0	0/0:11,0:11:24.04:0,24,232	0/0:11,0:11:24.04:0,24,232	0/0:12,0:12:36.06:0,36,347
chr10	89573235	.	A	AG	1197	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.794;DP=372;FS=0.715;HRun=4;HaplotypeScore=40.1323;InbreedingCoeff=0.8061;MQ=79.80;MQ0=0;MQRankSum=0.730;QD=33.25;ReadPosRankSum=-0.335;VQSLOD=3.4314;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:33.09:0,33,374	0/0:5,0:5:12.03:0,12,136	0/0:10,0:10:27.03:0,27,280	0/0:11,0:12:27.07:0,27,295	0/0:7,0:7:18.03:0,18,204	1/1:0,5:5:12.04:164,12,0	1/1:0,31:31:84.28:1149,84,0	0/0:16,0:16:42.12:0,42,476	0/0:16,0:16:45.13:0,45,510	0/0:5,0:5:15:0,15,156	0/0:2,0:2:2.75:0,3,34	0/0:14,0:14:42.09:0,42,464	0/0:12,0:12:30.05:0,30,327	0/0:16,0:16:45.11:0,45,499	0/0:18,0:18:45.12:0,45,505	0/0:15,0:15:42.12:0,42,475	0/0:29,0:29:75.17:0,75,835	0/0:22,0:22:60.15:0,60,668	0/0:16,0:16:33.08:0,33,366	0/0:5,0:5:12.03:0,12,136	0/0:44,0:44:99:0,129,1449	0/0:3,0:3:9.03:0,9,102	0/0:4,0:4:9.02:0,9,102	0/0:20,0:20:54.15:0,54,612	0/0:9,0:9:24.07:0,24,272	0/0:9,0:9:27.08:0,27,306	0/0:9,0:9:24.04:0,24,260	0/0:5,0:5:15.04:0,15,169
chr10	89575072	.	TCAGACAGACAGA	T	3985.55	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=10.192;DP=595;FS=2.653;HRun=0;HaplotypeScore=184.3542;InbreedingCoeff=0.6322;MQ=66.01;MQ0=9;MQRankSum=-5.593;QD=12.90;ReadPosRankSum=-0.792;VQSLOD=2.7640;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:52,0:50:8.19:313,8,0	1/1:12,0:12:14.99:324,15,0	0/0:32,0:23:33.05:0,33,637	0/0:41,0:27:27.09:0,27,675	0/0:10,6:16:0:0,0,0	0/0:14,0:14:24.08:0,24,573	0/0:29,0:29:54.16:0,54,1568	0/1:28,0:26:75.62:170,0,76	1/1:10,7:17:24.08:828,24,0	0/0:18,0:18:33.05:0,33,1082	0/0:14,0:14:24.06:0,24,752	1/1:3,16:19:9.03:316,9,0	0/0:18,0:18:45.15:0,45,1955	1/1:4,10:14:12.04:345,12,0	1/1:28,0:28:18.53:537,19,0	0/0:24,0:25:60.19:0,60,2008	1/1:39,0:38:12.04:358,12,0	0/0:24,0:24:42.14:0,42,1573	0/1:13,0:12:10.40:10,0,181	0/1:16,0:16:56.40:56,0,132	1/1:27,0:26:11.96:242,12,0	1/1:11,0:11:12.04:251,12,0	0/0:9,0:9:21.07:0,21,913	0/0:22,0:22:48.10:0,48,1983	1/1:9,12:21:6.02:210,6,0	0/0:19,0:18:39.11:0,39,1064	0/1:12,0:11:24.40:24,0,343	0/0:5,0:5:12.04:0,12,393
chr10	89575087	.	GACAGACAGACAGACAGACACAC	G	2738.34	PASS	AB=0.887;AC=10;AF=0.179;AN=56;BaseQRankSum=6.684;DP=584;FS=6.618;HRun=0;HaplotypeScore=249.9107;InbreedingCoeff=0.6337;MQ=56.66;MQ0=15;MQRankSum=-5.480;QD=15.47;ReadPosRankSum=1.733;VQSLOD=1.1701;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,46:54:0.30:595,0,0	1/1:8,0:8:14.93:348,15,0	0/0:25,0:16:36.11:0,36,918	0/0:33,0:19:45.05:0,45,1092	0/1:10,0:10:0:0,0,0	0/0:18,0:14:28.04:0,28,1125	0/0:27,0:26:63.17:0,63,2700	0/0:25,0:23:34.38:0,34,509	0/0:16,0:16:27.54:0,28,501	0/0:20,0:20:54.16:0,54,2417	0/0:17,0:17:39.12:0,39,2040	0/0:20,0:20:18.05:0,18,394	0/0:18,0:18:51.18:0,51,3900	0/0:15,0:15:12.04:0,12,225	1/1:3,23:27:18.95:1056,19,0	0/0:29,0:29:81.26:0,81,4521	1/1:4,36:40:12.04:717,12,0	0/0:18,0:18:51.10:0,51,2973	0/0:10,0:9:17.93:0,18,754	0/0:14,0:14:18.03:0,18,628	0/1:26,0:24:80.17:80,0,337	0/1:9,0:8:94.94:95,0,259	0/0:8,0:7:21.07:0,21,1565	0/0:30,0:30:75.03:0,75,4893	0/0:17,0:17:18.05:0,18,411	0/0:24,0:23:66.18:0,66,2718	0/0:18,0:17:35.55:0,36,1416	0/0:5,0:5:15.05:0,15,1005
chr10	89575103	.	G	GAC	109.92	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=1.658;DP=605;FS=6.005;HRun=0;HaplotypeScore=120.6329;InbreedingCoeff=0.4298;MQ=50.01;MQ0=20;MQRankSum=-2.015;QD=0.89;ReadPosRankSum=-3.819;VQSLOD=0.7814;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:50:4.87:0,5,19	1/1:8,0:8:2.94:18,3,0	./.	0/0:19,0:7:0.89:0,1,2	0/0:13,0:12:6.01:0,6,66	0/0:17,8:21:5.47:0,5,63	0/0:19,5:23:2.97:0,3,24	1/1:20,0:18:11.51:41,12,0	0/0:21,0:23:19.44:0,19,290	0/0:17,0:16:9.02:0,9,99	0/0:15,0:15:21.04:0,21,221	0/0:22,0:22:20.96:0,21,196	0/0:24,0:22:24.05:0,24,257	0/0:21,0:21:20.96:0,21,195	0/0:24,0:24:12.78:0,13,53	0/0:26,0:29:26.87:0,27,337	0/0:37,0:36:11.36:0,11,56	0/1:20,0:20:21.86:22,0,178	1/1:18,0:16:3.96:17,4,0	1/1:19,0:19:11.79:83,12,0	0/0:29,0:28:15.03:0,15,157	0/0:13,0:13:18.05:0,18,198	0/0:15,0:15:14.99:0,15,203	0/0:34,0:36:59.98:0,60,633	0/1:20,0:20:22.84:23,0,142	0/0:22,0:21:16.72:0,17,265	0/1:16,0:15:12.68:53,0,13	0/0:5,0:6:8.84:0,9,71
chr10	89575818	.	CTG	C	144.25	PASS	AB=0.881;AC=6;AF=0.111;AN=54;BaseQRankSum=2.416;DP=690;FS=0.000;HRun=0;HaplotypeScore=126.6441;InbreedingCoeff=-0.0840;MQ=67.84;MQ0=7;MQRankSum=1.328;QD=1.05;ReadPosRankSum=1.477;VQSLOD=2.3350;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:29.74:0,30,251	0/0:10,0:10:3:0,3,26	0/0:32,0:21:2.98:0,3,21	./.	0/0:21,0:21:3:0,3,27	0/0:19,0:24:6:0,6,52	0/0:21,0:27:14.64:0,15,98	0/0:19,0:18:12.04:0,12,158	0/0:21,0:21:6:0,6,54	0/0:33,0:33:48.11:0,48,641	0/0:9,0:9:9.03:0,9,136	0/0:24,0:23:3.47:0,3,29	0/1:21,2:21:12.30:12,0,251	0/0:22,0:21:2.99:0,3,23	0/0:21,0:29:2.71:0,3,12	0/1:29,8:37:99:149,0,448	0/0:8,0:11:5.74:0,6,39	0/0:20,4:24:5.74:0,6,502	0/0:24,0:21:18:0,18,167	0/0:12,0:16:3:0,3,26	0/0:51,0:50:14.94:0,15,121	0/0:20,0:19:8.94:0,9,71	0/1:15,2:14:9.26:9,0,274	0/1:32,5:37:73.34:73,0,633	1/1:22,0:22:0.44:1,0,0	0/0:35,3:38:16.03:0,16,648	0/0:15,0:19:6.01:0,6,70	0/0:8,0:14:6:0,6,52
chr10	89576242	.	AGAAACAGCATTTTG	A	6942.97	PASS	AC=22;AF=0.407;AN=54;BaseQRankSum=11.414;DP=545;FS=58.823;HRun=0;HaplotypeScore=117.9377;InbreedingCoeff=0.9204;MQ=31.27;MQ0=256;MQRankSum=-8.558;QD=39.45;ReadPosRankSum=3.726;VQSLOD=2.1536;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,7:7:12.04:503,12,0	1/1:2,5:5:15.05:629,15,0	0/0:1,0:1:3.01:0,3,186	./.	1/1:5,4:4:9.03:325,9,0	0/0:23,0:10:24.08:0,24,1677	0/0:27,0:12:30.10:0,30,2012	0/0:24,0:7:21.07:0,21,1395	1/1:13,4:4:12.04:503,12,0	0/0:22,0:15:45.15:0,45,2577	0/0:19,0:17:42.14:0,42,2658	1/1:7,7:7:15.05:629,15,0	0/0:26,0:13:36.12:0,36,2516	1/1:12,4:5:9.03:377,9,0	1/1:22,11:12:33.11:1384,33,0	0/0:32,0:14:39.13:0,39,2700	1/1:9,6:7:12.04:453,12,0	0/0:21,0:15:45.15:0,45,3112	0/0:18,0:7:21.07:0,21,1470	0/0:28,0:23:63.22:0,63,4172	1/1:7,3:4:6.02:252,6,0	1/1:6,7:8:18.06:755,18,0	0/0:18,0:14:33.11:0,33,2201	0/0:23,0:12:30.10:0,30,2096	1/1:5,8:9:27.09:1132,27,0	0/0:31,0:24:72.22:0,72,4492	0/0:40,0:16:48.16:0,48,3255	0/0:16,0:13:39.13:0,39,2700
chr10	89577634	.	C	CA	12389.42	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=12.198;DP=687;FS=5.407;HRun=0;HaplotypeScore=106.7297;InbreedingCoeff=0.9952;MQ=87.90;MQ0=0;MQRankSum=-4.297;QD=39.71;ReadPosRankSum=4.003;VQSLOD=4.8928;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:84.29:1342,84,0	1/1:1,5:6:16.30:243,16,0	0/0:26,0:25:68.43:0,68,897	0/0:35,0:34:72.35:0,72,1008	1/1:0,27:27:66.70:1056,67,0	0/0:19,0:19:54.18:0,54,754	0/0:27,0:27:78.26:0,78,1084	0/0:25,0:25:66.15:0,66,866	1/1:4,29:33:84.28:1319,84,0	0/0:21,0:21:63.20:0,63,864	0/0:13,0:13:36.09:0,36,500	1/1:2,32:34:96.33:1534,96,0	0/0:21,0:21:13.76:0,14,709	1/1:1,30:31:78.27:1246,78,0	1/1:1,27:28:66.22:1053,66,0	0/0:20,0:20:57.19:0,57,795	1/1:2,29:31:75.19:1199,75,0	0/0:19,0:19:50.31:0,50,654	0/0:28,0:28:81.27:0,81,1114	0/0:20,0:20:60.20:0,60,833	1/1:2,36:38:87.30:1391,87,0	1/1:0,27:27:72.25:1149,72,0	0/0:18,0:18:54.17:0,54,733	0/0:16,0:16:48.12:0,48,648	1/1:0,22:22:54.18:860,54,0	0/0:31,0:31:90.30:0,90,1254	0/0:20,0:20:54.07:0,54,728	0/0:16,0:16:45.02:0,45,601
chr10	89577897	.	TGG	T	7976.38	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=13.966;DP=623;FS=15.726;HRun=10;HaplotypeScore=132.8548;InbreedingCoeff=0.9672;MQ=77.05;MQ0=0;MQRankSum=-1.963;QD=23.60;ReadPosRankSum=7.197;VQSLOD=2.5146;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,35:37:84.11:918,84,0	1/1:1,4:5:12.03:134,12,0	0/0:19,0:20:30.97:0,31,351	0/0:17,0:17:6.38:0,6,221	1/1:1,16:17:24.05:268,24,0	0/0:17,0:19:37.40:0,37,395	0/0:14,0:35:60.81:0,61,613	0/0:10,0:15:17.70:0,18,170	1/1:4,33:37:87.16:953,87,0	0/0:15,0:16:24.54:0,25,324	0/0:3,0:5:9.86:0,10,35	1/1:5,34:39:90.13:1002,90,0	0/0:14,0:15:41.60:0,42,580	1/1:6,26:32:69.18:768,69,0	1/1:7,35:42:87.22:969,87,0	0/0:25,0:26:62.66:0,63,891	1/1:4,25:30:83.92:894,84,0	0/0:15,0:15:30.10:0,30,451	0/0:7,0:13:35.33:0,35,280	0/0:6,0:7:11.96:0,12,123	1/1:6,51:57:99:1169,105,0	1/1:4,23:27:57.15:633,57,0	0/0:7,0:9:22.53:0,23,229	0/0:34,0:37:94.74:0,95,1331	1/1:3,12:15:26.94:269,27,0	0/0:8,0:10:23.04:0,23,281	0/0:8,0:17:38.53:0,39,397	0/0:9,0:9:26.53:0,27,321
chr10	89578361	.	CT	C	469.54	PASS	AB=0.900;AC=10;AF=0.179;AN=56;BaseQRankSum=2.144;DP=281;FS=2.667;HRun=10;HaplotypeScore=35.7660;InbreedingCoeff=0.5738;MQ=46.71;MQ0=2;MQRankSum=-1.677;QD=8.10;ReadPosRankSum=1.231;VQSLOD=0.9000;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,10:12:3.17:138,3,0	1/1:0,3:3:9:78,9,0	0/1:8,1:6:17.56:18,0,25	0/0:5,0:3:2.22:0,2,7	0/0:13,1:14:1.04:0,1,237	0/0:8,1:10:0.82:0,1,207	0/0:6,0:6:12.03:0,12,133	0/0:14,0:13:33.05:0,33,344	0/0:7,0:7:18.03:0,18,189	0/0:16,0:16:40.64:0,41,423	0/1:8,1:9:1.99:2,0,208	0/0:9,0:9:24.06:0,24,265	0/0:13,0:13:33.09:0,33,365	0/0:3,0:3:9.02:0,9,99	1/1:3,9:12:23.98:208,24,0	0/0:5,0:5:15.04:0,15,166	1/1:5,8:13:20.90:173,21,0	0/0:10,0:10:24.06:0,24,264	0/0:24,0:23:56.47:0,56,571	0/0:8,0:8:21:0,21,211	0/0:8,0:8:18.02:0,18,188	0/0:8,0:8:12.03:0,12,133	0/0:8,0:8:20.89:0,21,192	0/0:11,0:11:18.03:0,18,190	0/0:18,0:18:45.12:0,45,497	0/0:11,0:11:30.07:0,30,325	0/0:9,0:9:24.06:0,24,264	0/0:6,0:6:6.02:0,6,66
chr10	89582885	.	CAAT	C	12249.06	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.832;DP=645;FS=8.186;HRun=0;HaplotypeScore=110.0824;InbreedingCoeff=0.9993;MQ=84.79;MQ0=1;MQRankSum=-3.697;QD=41.52;ReadPosRankSum=5.368;VQSLOD=6.0057;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:96.33:1599,96,0	1/1:1,11:12:27.09:437,27,0	0/0:23,0:22:63.18:0,63,1261	0/0:23,0:23:53.32:0,53,1030	1/1:3,9:12:24.04:370,24,0	0/0:14,0:14:39.13:0,39,868	0/0:39,0:38:99:0,102,2273	0/0:21,0:21:63.22:0,63,1384	1/1:1,22:23:60.21:1000,60,0	0/0:22,0:22:63.22:0,63,1374	0/0:10,0:10:27.09:0,27,569	1/1:2,33:35:96.33:1599,96,0	0/0:26,0:26:78.27:0,78,1743	1/1:1,26:27:69.24:1149,69,0	1/1:3,20:23:57.19:950,57,0	0/0:19,0:19:57.20:0,57,1290	1/1:2,29:31:75.26:1249,75,0	0/0:21,0:21:60.21:0,60,1336	0/0:18,0:18:48.61:0,49,979	0/0:12,0:12:36.12:0,36,816	1/1:2,56:58:99:2248,135,0	1/1:1,15:16:39.13:649,39,0	0/0:13,0:13:36.12:0,36,807	0/0:32,0:32:90.29:0,90,1990	1/1:1,21:22:60.21:1000,60,0	0/0:33,0:33:99:0,99,2240	0/0:14,0:14:42.14:0,42,951	0/0:10,0:10:30.10:0,30,653
chr10	89584840	.	CGT	C	8522.87	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=15.609;DP=684;FS=13.307;HRun=0;HaplotypeScore=117.9228;InbreedingCoeff=0.9602;MQ=65.85;MQ0=3;MQRankSum=0.307;QD=25.83;ReadPosRankSum=7.973;VQSLOD=4.3054;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:63.20:810,63,0	1/1:1,4:5:12.04:154,12,0	0/0:18,1:16:0.56:0,1,491	0/0:24,0:19:40.31:0,40,628	1/1:4,23:27:51.16:655,51,0	1/1:3,28:32:77.37:977,77,0	1/1:7,27:34:60.19:763,60,0	0/0:32,0:32:77.97:0,78,1170	1/1:1,18:19:36.12:462,36,0	0/0:23,0:23:63.21:0,63,1032	0/0:11,0:11:24.07:0,24,378	1/1:1,32:33:78.25:1001,78,0	0/0:11,0:11:27.09:0,27,454	1/1:3,24:26:63.20:809,63,0	1/1:0,11:11:24.08:309,24,0	0/0:19,1:20:18.63:0,19,872	1/1:5,21:26:42.14:540,42,0	0/0:30,1:31:48.63:0,49,1320	0/0:24,0:24:48.16:0,48,786	0/0:18,0:18:39.09:0,39,580	1/1:5,45:48:93.30:1194,93,0	1/1:5,9:14:24.08:308,24,0	0/0:14,0:14:36.11:0,36,567	0/0:64,2:66:99:0,139,2780	1/1:1,18:19:42.14:540,42,0	0/0:27,0:27:75.17:0,75,1146	0/0:16,0:16:42.13:0,42,665	0/0:17,0:17:45.15:0,45,758
chr10	89586966	.	ATT	A	8766.40	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=11.829;DP=597;FS=0.000;HRun=4;HaplotypeScore=76.2237;InbreedingCoeff=0.9934;MQ=87.62;MQ0=1;MQRankSum=-2.945;QD=37.46;ReadPosRankSum=7.492;VQSLOD=3.5936;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:63.21:927,63,0	1/1:0,6:6:14.97:221,15,0	0/0:21,0:21:54.16:0,54,899	0/0:26,0:26:77.84:0,78,1165	1/1:0,18:18:48.16:700,48,0	0/0:21,0:21:63.17:0,63,1033	0/0:28,0:28:84.25:0,84,1497	0/0:26,0:26:75.25:0,75,1371	1/1:1,22:22:57.19:839,57,0	0/0:24,0:24:66.20:0,66,1120	0/0:14,0:14:42.14:0,42,781	1/1:0,21:21:63.21:927,63,0	0/0:25,0:25:72.25:0,72,1342	1/1:0,31:31:84.28:1235,84,0	1/1:0,34:34:84.28:1237,84,0	0/0:29,0:29:87.27:0,87,1530	1/1:1,27:28:13.14:915,13,0	0/0:20,0:20:57.11:0,57,966	0/0:22,0:22:60.20:0,60,1097	0/0:11,0:11:33.10:0,33,587	1/1:1,25:26:69.23:1015,69,0	1/1:0,11:11:27.09:397,27,0	0/0:8,0:8:24.08:0,24,449	0/0:47,0:47:99:0,141,2511	1/1:1,9:10:24.08:353,24,0	0/0:14,0:14:42.14:0,42,786	0/0:15,0:15:45.15:0,45,837	0/0:12,0:12:36.04:0,36,535
chr10	89587756	.	AGTGTGTGTGTGT	A	1667.23	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=4.575;DP=585;FS=8.460;HRun=0;HaplotypeScore=179.7069;InbreedingCoeff=0.8548;MQ=57.58;MQ0=13;MQRankSum=-6.315;QD=15.88;ReadPosRankSum=0.105;VQSLOD=1.5761;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,15:40:9.03:278,9,0	1/1:4,4:8:12.04:352,12,0	./.	0/0:16,0:6:1.82:0,2,5	0/0:11,0:11:9.03:0,9,180	0/0:14,0:19:18.06:0,18,319	0/0:16,0:21:21.06:0,21,400	0/0:31,0:31:22.27:0,22,331	0/0:14,0:17:27.06:0,27,637	0/0:24,0:24:27.09:0,27,956	0/0:13,0:14:18.06:0,18,789	0/0:10,0:19:24.55:0,25,574	0/0:17,0:21:22.63:0,23,665	0/0:14,0:23:24.08:0,24,630	1/1:15,10:26:15.05:496,15,0	0/0:14,0:14:21.05:0,21,779	1/1:19,11:29:21.07:689,21,0	0/0:15,0:18:24.08:0,24,808	0/0:18,0:18:12.04:0,12,216	0/0:9,0:13:9.03:0,9,166	0/0:32,0:32:39.59:0,40,1069	0/0:15,0:18:15.05:0,15,384	0/0:12,0:13:15.05:0,15,413	0/0:30,0:42:60.21:0,60,2337	0/0:16,0:23:33.11:0,33,952	0/0:24,0:33:57.20:0,57,2055	0/0:13,0:19:15.90:0,16,279	0/0:2,0:4:9.03:0,9,351
chr10	89590952	.	AG	A	3851.08	PASS	AB=0.932;AC=31;AF=0.554;AN=56;BaseQRankSum=7.335;DP=484;FS=0.408;HRun=10;HaplotypeScore=65.4392;InbreedingCoeff=0.6117;MQ=74.33;MQ0=2;MQRankSum=2.052;QD=11.50;ReadPosRankSum=3.334;VQSLOD=3.0150;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:21:34.62:102,35,0	1/1:0,0:10:20.37:60,20,0	0/1:14,1:15:12.72:13,0,135	0/1:10,0:9:0.43:0,0,22	1/1:5,7:12:23.93:199,24,0	1/1:2,18:21:47.03:396,47,0	1/1:2,17:19:17.81:384,18,0	0/0:12,0:12:12:0,12,115	1/1:4,24:28:62.97:546,63,0	0/0:17,0:17:31.90:0,32,336	0/1:18,1:19:8.02:8,0,139	1/1:4,18:22:47.98:417,48,0	0/0:12,0:12:33.08:0,33,353	1/1:7,9:16:23.98:208,24,0	1/1:4,0:26:34.62:102,35,0	0/0:9,0:10:21.02:0,21,218	1/1:4,0:33:57.03:168,57,0	0/0:17,1:18:13.04:0,13,365	0/0:10,1:11:0.99:0,1,226	0/0:15,1:16:1.08:0,1,232	1/1:3,21:23:53.99:469,54,0	1/1:4,15:19:47.98:416,48,0	0/1:13,2:15:34.04:34,0,115	0/0:17,1:18:22.07:0,22,463	1/1:4,12:16:35.99:312,36,0	0/1:7,1:8:17.03:17,0,57	0/0:18,0:18:22.10:0,22,447	0/0:17,0:17:33.04:0,33,338
chr10	89591473	.	AG	A	1325.83	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.844;DP=279;FS=8.927;HRun=2;HaplotypeScore=27.8945;InbreedingCoeff=0.9272;MQ=92.69;MQ0=0;MQRankSum=-0.738;QD=31.57;ReadPosRankSum=3.018;VQSLOD=2.0974;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:60.20:779,60,0	1/1:0,3:3:9.03:117,9,0	0/0:14,0:14:39.12:0,39,556	0/0:15,0:15:39.13:0,39,555	0/0:6,0:6:18.06:0,18,270	0/0:9,0:9:27.09:0,27,405	0/0:14,0:14:39.13:0,39,578	0/0:15,0:15:45.15:0,45,671	0/0:7,0:7:21.07:0,21,315	0/0:8,0:8:21.07:0,21,310	0/0:4,0:4:12.04:0,12,175	0/0:8,0:8:24.08:0,24,360	0/0:3,0:3:9.03:0,9,135	0/0:10,0:10:27.09:0,27,405	1/1:0,7:7:18.06:234,18,0	0/0:12,0:12:36.11:0,36,520	1/1:1,10:11:27.09:351,27,0	0/0:15,0:15:42.12:0,42,604	0/0:8,0:8:21.07:0,21,313	0/0:7,0:7:21.07:0,21,313	0/0:19,0:19:57.19:0,57,852	0/0:3,0:3:9.03:0,9,135	0/0:12,0:12:33.11:0,33,494	0/0:11,0:11:33.11:0,33,495	0/0:5,0:5:15.05:0,15,224	0/0:16,0:16:45.15:0,45,675	0/0:10,0:10:30.10:0,30,450	0/0:6,0:6:18.06:0,18,270
chr10	89593542	.	AC	A	9066.71	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=8.827;DP=586;FS=3.408;HRun=7;HaplotypeScore=62.2644;InbreedingCoeff=0.9901;MQ=83.66;MQ0=0;MQRankSum=-1.504;QD=24.91;ReadPosRankSum=1.814;VQSLOD=5.4713;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,42:45:99:1132,111,0	1/1:0,3:3:9.02:92,9,0	0/0:15,0:16:35.91:0,36,381	0/0:25,0:25:42.68:0,43,549	1/1:2,10:12:27.06:275,27,0	1/1:1,21:20:45.09:459,45,0	1/1:1,19:19:48.11:490,48,0	1/1:2,17:19:48.09:482,48,0	1/1:3,13:16:39.09:398,39,0	0/0:22,0:22:60.18:0,60,742	0/0:18,0:18:39.12:0,39,490	1/1:3,26:28:72.16:734,72,0	0/0:18,0:18:45.13:0,45,554	1/1:4,20:22:54.12:551,54,0	1/1:1,10:11:30.07:306,30,0	0/0:13,0:13:39.12:0,39,491	1/1:5,24:29:69.14:704,69,0	0/0:31,0:31:84.25:0,84,1040	1/1:3,15:18:45.09:459,45,0	1/1:2,9:11:30.07:305,30,0	1/1:5,45:50:99:1347,132,0	1/1:2,20:22:51.12:520,51,0	0/0:15,0:15:45.14:0,45,566	0/0:28,0:25:75.22:0,75,916	1/1:1,13:14:36.04:355,36,0	0/0:30,0:30:81.24:0,81,1004	1/1:2,16:17:45.10:459,45,0	0/0:6,0:6:18.06:0,18,226
chr10	89593865	.	T	TGG	1703.33	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-0.292;DP=348;FS=2.678;HRun=8;HaplotypeScore=75.2868;InbreedingCoeff=0.9049;MQ=80.75;MQ0=0;MQRankSum=-0.969;QD=19.36;ReadPosRankSum=0.815;VQSLOD=2.0631;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:34.39:0,34,208	0/0:3,0:3:2.94:0,3,18	0/0:10,0:11:26.74:0,27,268	0/0:15,0:15:15.47:0,15,154	1/1:10,1:11:17.87:172,18,0	0/0:9,0:9:21.06:0,21,234	0/0:28,0:28:74.89:0,75,828	0/0:18,0:18:26.41:0,26,117	1/1:13,0:13:27.05:272,27,0	0/0:7,0:7:15.04:0,15,167	0/0:12,0:12:33:0,33,351	1/1:10,1:11:33.06:358,33,0	0/0:5,0:5:5.96:0,6,67	1/1:11,0:11:18.03:192,18,0	0/0:22,0:22:49.97:0,50,289	0/0:10,0:10:15.02:0,15,163	0/0:20,0:20:42.94:0,43,226	0/0:10,0:10:15:0,15,167	0/0:9,0:9:13.73:0,14,51	0/0:12,0:13:12.46:0,12,55	1/1:17,1:18:36.07:380,36,0	1/1:14,1:15:33.05:328,33,0	0/0:8,0:8:17.88:0,18,181	0/0:8,0:8:21.06:0,21,232	1/1:8,1:9:18.04:195,18,0	0/0:8,0:8:15.02:0,15,159	0/0:11,0:11:6.95:0,7,27	0/0:8,0:8:21.06:0,21,232
chr10	89593869	.	G	GGA	3671.66	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-0.857;DP=340;FS=20.708;HRun=0;HaplotypeScore=65.3022;InbreedingCoeff=0.7617;MQ=79.14;MQ0=0;MQRankSum=-0.425;QD=17.74;ReadPosRankSum=4.009;VQSLOD=1.5521;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:68.64:69,0,95	1/1:3,0:3:0.10:20,0,0	0/0:9,0:9:26.85:0,27,344	0/0:15,0:15:27.55:0,28,303	1/1:1,8:10:18.04:323,18,0	0/0:7,0:7:21.07:0,21,318	0/0:28,0:28:84.22:0,84,1205	1/1:20,0:20:13.16:105,13,0	1/1:1,10:11:27.09:485,27,0	0/0:7,0:7:18.06:0,18,255	0/0:14,0:14:42.11:0,42,569	1/1:1,10:11:33.11:562,33,0	0/0:5,0:5:12.01:0,12,140	1/1:1,11:13:18.06:321,18,0	0/1:22,0:22:5.47:5,0,68	0/0:8,0:8:24.05:0,24,304	0/1:19,0:19:1.56:72,0,2	0/0:10,0:10:27.03:0,27,326	1/1:11,0:11:5.63:52,6,0	1/1:12,0:12:23.96:79,24,0	1/1:2,16:18:36.12:629,36,0	1/1:2,13:16:26.17:580,26,0	0/0:6,0:6:18.06:0,18,266	0/0:9,0:9:27.01:0,27,357	1/1:1,6:8:18.06:317,18,0	0/0:8,0:8:21.05:0,21,280	1/1:10,0:10:15.95:52,16,0	0/0:7,0:7:21.07:0,21,316
chr10	89593870	.	G	GA	4058.63	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=5.056;DP=333;FS=7.544;HRun=0;HaplotypeScore=56.9849;InbreedingCoeff=0.9689;MQ=78.94;MQ0=0;MQRankSum=-3.548;QD=20.19;ReadPosRankSum=2.670;VQSLOD=5.3335;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,7:23:17.52:382,18,0	1/1:2,0:2:5.97:46,6,0	0/0:10,0:10:26.99:0,27,327	0/0:13,0:13:27.58:0,28,296	1/1:10,0:10:17.20:89,17,0	0/0:8,0:8:21.07:0,21,292	0/0:28,0:28:84.21:0,84,1118	1/1:0,23:23:63.12:789,63,0	1/1:9,0:9:24.88:112,25,0	0/0:7,0:7:18.05:0,18,238	0/0:15,0:15:42.11:0,42,523	1/1:11,0:11:22.61:106,23,0	0/0:5,0:5:12.01:0,12,132	1/1:12,0:12:16.25:69,16,0	1/1:14,7:21:53.54:454,54,0	0/0:8,0:8:24.05:0,24,285	1/1:10,9:19:56.58:515,57,0	0/0:9,0:9:27.03:0,27,308	1/1:0,11:11:32.75:411,33,0	1/1:1,10:12:33.57:466,34,0	1/1:16,0:16:30.18:132,30,0	1/1:14,0:14:23:118,23,0	0/0:6,0:6:18.06:0,18,242	0/0:9,0:9:27.07:0,27,345	1/1:7,0:7:15.94:66,16,0	0/0:7,0:7:21.05:0,21,258	1/1:0,11:11:21.07:303,21,0	0/0:7,0:7:21.07:0,21,292
chr10	89593874	.	TC	T	813.45	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.306;DP=326;FS=0.567;HRun=1;HaplotypeScore=67.3640;InbreedingCoeff=0.9015;MQ=80.40;MQ0=0;MQRankSum=-3.600;QD=13.56;ReadPosRankSum=2.714;VQSLOD=2.7456;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,6:19:11.58:244,12,0	1/1:1,0:1:2.84:14,3,0	0/0:11,0:11:20.90:0,21,364	0/0:13,0:13:12.62:0,13,242	0/0:10,0:10:18.06:0,18,269	0/0:9,0:9:27.09:0,27,413	0/0:31,0:31:90.31:0,90,1405	0/0:22,0:22:62.99:0,63,927	0/0:9,0:9:25.90:0,26,378	0/0:6,0:6:15.04:0,15,219	0/0:14,0:14:42.04:0,42,623	0/0:11,0:11:27.66:0,28,424	0/0:7,0:7:15.01:0,15,181	0/0:10,0:10:18.06:0,18,265	1/1:15,7:22:46.54:367,47,0	0/0:7,0:7:21.05:0,21,281	1/1:11,7:18:38.79:335,39,0	0/0:8,0:8:24.08:0,24,377	0/0:11,0:11:33.11:0,33,506	0/0:12,0:12:33.06:0,33,461	0/0:15,0:15:32.60:0,33,468	0/0:13,0:13:33.10:0,33,497	0/0:8,0:8:20.73:0,21,275	0/0:11,0:11:30.10:0,30,452	0/0:7,0:7:18.05:0,18,240	0/0:4,0:4:12.04:0,12,191	0/0:9,0:9:24.07:0,24,346	0/0:8,0:8:24.08:0,24,358
chr10	89594699	.	A	AGCCT	5521.40	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=-1.355;DP=628;FS=3.563;HRun=0;HaplotypeScore=111.3156;InbreedingCoeff=0.8044;MQ=58.37;MQ0=9;MQRankSum=0.166;QD=20.60;ReadPosRankSum=-6.683;VQSLOD=2.9890;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:81.26:0,81,1209	0/0:14,0:14:36.12:0,36,554	0/0:24,0:18:54.16:0,54,924	0/0:23,0:15:41.93:0,42,629	1/1:6,13:20:24.06:333,24,0	0/0:12,0:12:36.10:0,36,514	0/0:24,0:24:54.18:0,54,860	1/1:28,0:27:75.25:1251,75,0	1/1:22,0:22:12.04:259,12,0	0/0:29,0:29:81.27:0,81,1387	0/0:22,0:22:35.44:0,35,853	1/1:16,0:17:5.98:85,6,0	0/1:16,0:16:24.54:25,0,338	1/1:16,1:17:11.81:262,12,0	0/0:35,0:35:87.29:0,87,1327	0/0:29,0:29:87.30:0,87,1494	0/0:23,0:23:69.23:0,69,1167	1/1:16,0:14:33.11:566,33,0	1/1:1,16:19:54.17:943,54,0	1/1:6,19:29:48.13:781,48,0	1/1:3,20:25:8.66:199,9,0	1/1:13,0:13:5.64:129,6,0	0/1:14,0:14:55.21:55,0,236	0/0:20,0:20:57.19:0,57,958	0/0:18,0:18:32.94:0,33,804	0/0:30,0:29:84.27:0,84,1262	1/1:5,26:32:23.88:635,24,0	0/0:23,0:23:69.24:0,69,1186
chr10	89594701	.	CCTAT	C	1199.96	PASS	AB=0.978;AC=14;AF=0.280;AN=50;BaseQRankSum=2.576;DP=660;FS=0.000;HRun=0;HaplotypeScore=130.1529;InbreedingCoeff=0.6175;MQ=57.47;MQ0=14;MQRankSum=1.393;QD=5.94;ReadPosRankSum=-0.618;VQSLOD=2.5632;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:35:6.48:57,6,0	1/1:8,5:14:12.03:164,12,0	./.	./.	0/0:22,0:22:2.98:0,3,54	1/1:9,0:12:9.01:84,9,0	1/1:19,0:24:3:28,3,0	./.	0/0:9,0:31:12.04:0,12,207	0/0:29,0:29:27.08:0,27,543	0/0:23,0:24:24.08:0,24,537	0/0:4,0:22:3.01:0,3,51	0/0:8,0:18:12.03:0,12,182	0/0:4,0:20:12.04:0,12,207	1/1:19,15:34:30.10:454,30,0	0/1:29,0:29:12.26:12,0,657	0/0:24,0:24:30.10:0,30,692	0/0:17,0:15:14.99:0,15,167	0/0:21,0:18:15.03:0,15,258	0/0:31,0:29:21.07:0,21,415	0/0:23,0:23:7.58:0,8,112	0/0:2,0:13:6.02:0,6,103	0/0:10,0:15:12.04:0,12,206	0/1:21,1:21:18.30:18,0,483	0/0:19,0:20:33.11:0,33,743	1/1:18,14:31:39.11:549,39,0	0/0:30,0:30:27.09:0,27,530	0/0:23,0:23:33.09:0,33,717
chr10	89595572	.	A	ACAGCCC	3471.20	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-4.309;DP=579;FS=0.000;HRun=0;HaplotypeScore=119.2484;InbreedingCoeff=0.9269;MQ=80.68;MQ0=1;MQRankSum=-9.670;QD=44.50;ReadPosRankSum=1.699;VQSLOD=3.0807;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,16:33:45.15:1508,45,0	1/1:5,0:5:3.01:95,3,0	0/0:19,0:19:39.08:0,39,720	0/0:16,0:16:24.08:0,24,515	0/0:19,0:19:30.09:0,30,627	0/0:28,0:28:69.24:0,69,1466	0/0:32,0:32:63.20:0,63,1321	0/0:33,0:33:57.20:0,57,1150	0/0:26,0:26:57.16:0,57,1146	0/0:22,0:22:42.14:0,42,852	0/0:15,0:15:27.09:0,27,582	0/0:27,0:27:60.21:0,60,1271	0/0:12,0:12:33.11:0,33,697	0/0:28,0:28:69.21:0,69,1391	1/1:8,12:21:33.11:1106,33,0	0/0:24,0:24:72.23:0,72,1504	1/1:6,7:18:24.08:762,24,0	0/0:32,0:31:75.21:0,75,1537	0/0:17,0:17:45.08:0,45,807	0/0:10,0:10:27.09:0,27,556	0/0:46,0:46:99:0,102,1979	0/0:13,0:13:21.07:0,21,432	0/0:12,0:12:18.05:0,18,344	0/0:16,0:16:42.14:0,42,886	0/0:15,0:15:27.08:0,27,525	0/0:20,0:20:21.07:0,21,436	0/0:14,0:14:36.09:0,36,734	0/0:5,0:5:9.03:0,9,195
chr10	89595766	.	G	GCC	1093.68	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-1.904;DP=522;FS=10.650;HRun=8;HaplotypeScore=68.3754;InbreedingCoeff=0.9781;MQ=79.91;MQ0=0;MQRankSum=-1.833;QD=17.93;ReadPosRankSum=-1.559;VQSLOD=0.5265;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,7:21:29.51:343,30,0	1/1:3,0:3:8.31:48,8,0	0/0:17,0:17:22.85:0,23,255	0/0:17,0:17:40.69:0,41,382	0/0:21,0:21:46.35:0,46,530	0/0:22,0:23:51.04:0,51,617	0/0:22,0:22:57.15:0,57,635	0/0:35,0:35:87.14:0,87,924	0/0:16,0:16:33.07:0,33,368	0/0:15,0:15:39.10:0,39,435	0/0:14,0:14:36.09:0,36,398	0/0:18,0:18:51.13:0,51,568	0/0:22,0:22:60.14:0,60,666	0/0:19,0:19:39.04:0,39,412	1/1:2,12:14:24.08:379,24,0	0/0:21,0:21:57.11:0,57,616	1/1:4,15:23:39.98:478,40,0	0/0:21,0:21:54.10:0,54,590	0/0:20,0:20:42.03:0,42,435	0/0:16,0:16:45.12:0,45,501	0/0:38,0:38:99:0,102,1137	0/0:10,0:10:27.06:0,27,300	0/0:8,0:8:24.06:0,24,268	0/0:22,0:22:66.18:0,66,734	0/0:14,0:14:30.06:0,30,334	0/0:14,0:14:30.07:0,30,334	0/0:24,0:24:66.18:0,66,735	0/0:14,0:14:42.08:0,42,448
chr10	89596905	.	CTTT	C	5486.97	PASS	AB=0.515;AC=9;AF=0.161;AN=56;BaseQRankSum=12.277;DP=746;FS=1.717;HRun=4;HaplotypeScore=103.7669;InbreedingCoeff=0.8590;MQ=81.41;MQ0=0;MQRankSum=-3.678;QD=41.57;ReadPosRankSum=2.060;VQSLOD=3.7103;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,3120	1/1:0,5:5:12.04:212,12,0	0/0:21,0:21:60.21:0,60,1361	0/0:19,0:19:51.15:0,51,1111	0/0:22,0:22:66.23:0,66,1559	1/1:0,15:15:36.12:635,36,0	1/1:0,43:43:99:1919,111,0	0/0:27,0:27:78.27:0,78,1818	0/0:26,0:26:78.27:0,78,1843	0/0:33,0:33:99:0,99,2289	0/0:22,0:22:66.20:0,66,1449	0/0:25,0:25:75.26:0,75,1771	0/0:36,0:36:99:0,108,2546	0/0:32,0:32:96.33:0,96,2230	1/1:1,33:34:84.29:1481,84,0	0/0:28,0:28:81.28:0,81,1914	0/1:2,33:35:60.67:1241,0,61	0/0:18,0:18:54.19:0,54,1276	0/0:14,0:14:42.14:0,42,932	0/0:20,0:20:60.21:0,60,1417	0/0:42,0:42:99:0,123,2796	0/0:24,0:24:69.24:0,69,1594	0/0:26,0:26:78.25:0,78,1778	0/0:33,0:33:99:0,99,2295	0/0:21,0:21:63.22:0,63,1484	0/0:35,0:35:99:0,105,2462	0/0:26,0:26:78.27:0,78,1810	0/0:18,0:18:54.19:0,54,1253
chr10	89597550	.	C	CT	1304.03	PASS	AB=0.769;AC=23;AF=0.411;AN=56;BaseQRankSum=-3.470;DP=398;FS=5.742;HRun=14;HaplotypeScore=57.6201;InbreedingCoeff=0.4613;MQ=70.60;MQ0=5;MQRankSum=-0.315;QD=6.18;ReadPosRankSum=-4.473;VQSLOD=1.0478;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:14,4:18:6.61:7,0,92	0/0:0,0:4:8.15:0,8,23	0/0:19,0:12:2.01:0,2,14	0/0:15,0:7:5.93:0,6,34	1/1:8,4:13:9.41:103,9,0	0/0:4,0:12:15.04:0,15,49	0/0:3,0:14:16.28:0,16,47	0/1:18,11:30:15.96:213,0,16	1/1:7,1:8:5.14:67,5,0	0/0:12,0:12:20.57:0,21,134	0/0:12,0:12:6.16:0,6,135	1/1:7,7:14:3:27,3,0	1/1:5,2:8:2.96:19,3,0	1/1:4,4:8:15.87:127,16,0	0/0:1,0:10:16.29:0,16,47	0/0:17,0:17:9.34:0,9,157	0/0:10,0:17:19.67:0,20,66	0/1:7,16:24:25.19:199,0,25	0/1:12,8:20:4.19:183,0,4	1/1:7,1:9:17.10:160,17,0	1/1:3,15:18:9:79,9,0	1/1:8,4:12:17.30:151,17,0	0/0:6,0:6:11.78:0,12,76	0/0:16,0:16:20.47:0,20,134	0/0:11,0:14:16.71:0,17,102	0/0:17,0:18:24.67:0,25,157	1/1:4,12:16:1.77:136,2,0	0/1:12,0:12:16.80:17,0,140
chr10	89597631	.	TA	T	582.15	PASS	AB=1.000;AC=9;AF=0.173;AN=52;BaseQRankSum=7.209;DP=241;FS=0.000;HRun=7;HaplotypeScore=27.5661;InbreedingCoeff=0.6297;MQ=75.56;MQ0=0;MQRankSum=-0.952;QD=13.86;ReadPosRankSum=1.856;VQSLOD=1.6997;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:51.16:0,51,639	1/1:1,1:2:3.01:31,3,0	0/0:3,0:3:5.98:0,6,56	0/0:6,0:6:8.38:0,8,74	0/0:12,0:12:30.98:0,31,380	0/1:7,0:7:2.52:57,0,3	1/1:11,0:11:28.56:147,29,0	0/0:18,0:18:45.12:0,45,540	0/0:3,0:3:3.01:0,3,38	0/0:10,0:10:15.05:0,15,186	0/0:11,0:11:21.07:0,21,261	0/0:2,0:2:3.01:0,3,38	0/0:4,0:4:9.03:0,9,112	0/0:4,0:4:6.02:0,6,75	1/1:1,1:2:3.01:30,3,0	0/0:4,0:4:6.01:0,6,62	1/1:2,18:20:45.10:459,45,0	0/0:22,0:22:60.16:0,60,738	0/0:13,0:13:39.11:0,39,478	0/0:10,0:10:18.06:0,18,225	0/0:3,0:3:9.03:0,9,113	./.	./.	0/0:3,0:3:9.03:0,9,110	0/0:10,0:10:27.09:0,27,338	0/0:15,0:15:36.11:0,36,440	0/0:13,0:13:30.10:0,30,374	0/0:9,0:9:27.06:0,27,312
chr10	89597638	.	AT	A	606.29	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=7.350;DP=214;FS=0.717;HRun=1;HaplotypeScore=25.7456;InbreedingCoeff=0.6883;MQ=75.16;MQ0=0;MQRankSum=-0.810;QD=15.96;ReadPosRankSum=1.440;VQSLOD=3.5429;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.16:0,51,715	1/1:1,0:1:2.04:6,2,0	0/0:2,0:2:6:0,6,54	0/0:9,0:8:10.93:0,11,127	0/0:11,0:11:8.47:0,8,414	1/1:0,6:6:15.05:209,15,0	1/1:0,11:11:33.07:439,33,0	0/0:18,0:18:54.14:0,54,705	0/0:1,0:1:3.01:0,3,44	0/0:5,0:5:15.02:0,15,180	0/0:8,0:8:24.05:0,24,296	0/0:1,0:1:3.01:0,3,44	0/0:5,0:5:12.02:0,12,141	0/0:2,0:2:6.02:0,6,88	1/1:1,0:1:2.04:6,2,0	0/0:1,0:1:3.01:0,3,44	1/1:19,0:19:18.67:89,19,0	0/0:22,0:22:63.18:0,63,881	0/0:16,0:16:48.12:0,48,634	0/0:6,0:6:18.06:0,18,246	0/0:3,0:3:9.03:0,9,131	./.	./.	0/0:3,0:3:9.02:0,9,101	0/0:10,0:10:27.09:0,27,380	0/0:13,0:13:39.12:0,39,536	0/0:11,0:11:30.09:0,30,409	0/0:10,0:10:24.05:0,24,316
chr10	89597781	.	A	AAAATAAAT	1155.46	PASS	AC=10;AF=0.227;AN=44;BaseQRankSum=-1.612;DP=193;FS=3.670;HRun=0;HaplotypeScore=56.2697;InbreedingCoeff=0.6052;MQ=52.79;MQ0=6;MQRankSum=-3.002;QD=39.84;ReadPosRankSum=-1.703;VQSLOD=2.7132;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:69.17:0,69,1526	1/1:2,0:2:6.01:98,6,0	./.	./.	0/0:7,0:7:9.03:0,9,185	1/1:4,0:4:3.01:68,3,0	1/1:3,0:3:6.02:146,6,0	0/0:20,0:18:42.13:0,42,939	./.	0/0:4,0:4:9.02:0,9,176	0/0:5,0:5:6.02:0,6,154	0/0:5,0:5:6.02:0,6,114	0/0:6,0:6:9.03:0,9,203	./.	1/1:0,1:1:3.01:125,3,0	0/0:4,0:4:6.02:0,6,152	1/1:13,6:17:33.04:852,33,0	0/0:15,0:15:27.09:0,27,578	0/0:18,0:18:30.07:0,30,576	0/0:2,0:2:6.02:0,6,149	./.	0/0:2,0:2:6.02:0,6,154	./.	0/0:2,0:2:3.01:0,3,77	0/0:9,0:9:21.06:0,21,445	0/0:9,0:9:21.06:0,21,387	0/0:8,0:8:6.02:0,6,154	0/0:4,0:4:3.01:0,3,52
chr10	89597934	.	G	GC	1368.25	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-1.651;DP=397;FS=11.045;HRun=6;HaplotypeScore=38.0953;InbreedingCoeff=0.9411;MQ=91.09;MQ0=0;MQRankSum=-1.952;QD=20.42;ReadPosRankSum=-0.459;VQSLOD=1.7069;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:75.11:0,75,747	1/1:1,3:4:9.03:113,9,0	0/0:21,0:21:44.99:0,45,429	0/0:10,0:10:6.28:0,6,213	0/0:11,0:11:24.05:0,24,244	1/1:3,0:11:14.20:72,14,0	1/1:1,0:14:28.41:145,28,0	0/0:22,0:22:63.14:0,63,643	0/0:14,0:14:39.07:0,39,390	0/0:15,0:15:45.10:0,45,459	0/0:7,0:7:21.05:0,21,214	0/0:10,0:10:24.05:0,24,244	0/0:10,0:10:30.07:0,30,305	0/0:13,0:13:39.07:0,39,387	1/1:1,10:11:27.09:339,27,0	0/0:13,0:13:36.08:0,36,367	1/1:1,26:27:69.22:868,69,0	0/0:15,0:15:45.07:0,45,449	0/0:21,0:21:63.03:0,63,608	0/0:5,0:5:9.01:0,9,92	0/0:21,0:21:53.67:0,54,602	0/0:9,0:9:24.05:0,24,245	0/0:7,0:7:18.04:0,18,183	0/0:24,0:24:63.14:0,63,642	0/0:11,0:11:33.07:0,33,336	0/0:13,0:13:36.06:0,36,358	0/0:15,0:15:39.08:0,39,397	0/0:13,0:13:39.09:0,39,398
chr10	89598804	.	T	TG	2030.56	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.074;DP=628;FS=1.858;HRun=1;HaplotypeScore=63.1093;InbreedingCoeff=0.9147;MQ=83.47;MQ0=0;MQRankSum=-1.974;QD=41.44;ReadPosRankSum=-0.864;VQSLOD=3.7623;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,1750	0/0:7,0:7:21.07:0,21,272	0/0:17,0:17:45.13:0,45,563	0/0:26,0:26:63.11:0,63,764	0/0:18,0:18:54.15:0,54,673	1/1:0,20:20:60.20:899,60,0	1/1:0,29:29:84.28:1253,84,0	0/0:23,0:23:63.20:0,63,807	0/0:22,0:22:66.21:0,66,856	0/0:21,0:21:63.16:0,63,786	0/0:15,0:15:45.15:0,45,584	0/0:25,0:25:75.22:0,75,946	0/0:26,0:26:78.24:0,78,998	0/0:20,0:20:57.17:0,57,726	0/0:19,0:19:57.17:0,57,725	0/0:24,0:24:72.23:0,72,935	0/0:41,0:41:99:0,120,1558	0/0:18,0:18:54.14:0,54,681	0/0:23,0:23:69.21:0,69,872	0/0:15,0:15:45.10:0,45,565	0/0:35,0:35:87.24:0,87,1109	0/0:12,0:12:33.05:0,33,394	0/0:17,0:17:48.16:0,48,623	0/0:33,0:33:99:0,99,1284	0/0:19,0:19:54.15:0,54,674	0/0:23,0:22:69.22:0,69,884	0/0:33,0:33:84.24:0,84,1062	0/0:1,0:1:3.01:0,3,39
chr10	89599220	.	TAGAG	T	2839.15	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.253;DP=552;FS=0.000;HRun=0;HaplotypeScore=95.5940;InbreedingCoeff=0.9944;MQ=84.40;MQ0=0;MQRankSum=-3.797;QD=43.02;ReadPosRankSum=4.370;VQSLOD=3.7475;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:99:0,102,2523	1/1:0,6:6:18.06:348,18,0	0/0:15,0:15:27.72:0,28,988	0/0:21,0:21:54.59:0,55,956	0/0:10,0:10:30.09:0,30,750	0/0:16,0:16:48.13:0,48,1164	0/0:22,0:22:63.19:0,63,1603	0/0:23,0:23:66.21:0,66,1636	0/0:13,0:13:39.13:0,39,1060	0/0:18,0:18:51.17:0,51,1343	0/0:8,0:8:24.08:0,24,655	0/0:28,0:28:84.29:0,84,2268	0/0:15,0:15:45.13:0,45,1110	0/0:16,0:16:48.16:0,48,1270	1/1:1,21:22:48.16:928,48,0	0/0:18,0:18:54.19:0,54,1472	1/1:0,38:38:90.26:1705,90,0	0/0:34,0:34:93.25:0,93,2316	0/0:23,0:23:69.23:0,69,1788	0/0:9,0:9:27.08:0,27,617	0/0:52,0:52:99:0,154,4047	0/0:16,0:16:39.10:0,39,945	0/0:10,0:10:30.09:0,30,730	0/0:30,0:30:90.28:0,90,2328	0/0:15,0:15:45.12:0,45,1106	0/0:20,0:20:57.17:0,57,1442	0/0:10,0:10:30.10:0,30,786	0/0:8,0:8:24.08:0,24,635
chr10	89600036	.	TTGTG	T	2818.23	PASS	AB=0.871;AC=33;AF=0.660;AN=50;BaseQRankSum=7.700;DP=766;FS=3.406;HRun=0;HaplotypeScore=138.7135;InbreedingCoeff=0.4593;MQ=59.09;MQ0=24;MQRankSum=-3.153;QD=5.35;ReadPosRankSum=2.084;VQSLOD=2.1635;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:39:11.10:133,11,0	1/1:3,0:12:11.84:112,12,0	./.	./.	1/1:8,10:17:14.81:170,15,0	1/1:11,0:20:12.01:112,12,0	1/1:11,0:21:12.01:111,12,0	./.	1/1:24,5:30:25.63:359,26,0	0/1:22,0:23:46.30:46,0,311	0/1:10,1:12:32.14:32,0,208	1/1:20,10:33:22.88:296,23,0	0/1:31,2:35:35.77:36,0,483	1/1:19,8:30:17.93:282,18,0	1/1:23,0:31:15.02:139,15,0	0/0:23,0:28:41.57:0,42,690	0/1:17,0:20:34.93:72,0,35	0/1:28,7:36:20.63:302,0,21	1/1:23,1:22:8.24:101,8,0	1/1:22,2:31:23.66:245,24,0	1/1:34,14:48:8.88:120,9,0	1/1:24,6:30:11.99:142,12,0	0/0:11,0:11:15.05:0,15,324	0/0:32,0:37:61.89:0,62,1111	0/0:18,0:20:14.79:0,15,242	0/0:40,0:39:13.57:0,14,999	1/1:12,9:22:14.99:189,15,0	0/0:4,0:4:3.01:0,3,71
chr10	89601101	.	TATTA	T	1547.28	PASS	AC=6;AF=0.120;AN=50;BaseQRankSum=-1.292;DP=347;FS=8.792;HRun=0;HaplotypeScore=73.6162;InbreedingCoeff=0.8006;MQ=69.26;MQ0=0;MQRankSum=1.732;QD=30.34;ReadPosRankSum=1.662;VQSLOD=2.7047;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:24:45.15:0,45,806	1/1:2,6:8:18.06:297,18,0	./.	./.	0/0:11,0:11:24.08:0,24,589	0/0:4,0:13:39.12:0,39,615	./.	0/0:37,0:37:48.16:0,48,1177	0/0:7,0:7:9.03:0,9,221	0/0:14,0:14:21.07:0,21,515	0/0:9,0:9:18.06:0,18,440	0/0:14,0:14:18.06:0,18,438	0/0:7,0:7:15.05:0,15,368	0/0:9,0:9:21.07:0,21,492	1/1:3,16:19:33.11:545,33,0	0/0:7,0:7:15.05:0,15,368	1/1:4,20:24:51.17:842,51,0	0/0:10,0:10:21.07:0,21,515	0/0:14,0:14:24.08:0,24,560	0/0:18,0:18:30.10:0,30,692	0/0:7,0:7:6.02:0,6,147	0/0:3,0:3:3.01:0,3,74	0/0:1,0:1:3.01:0,3,74	0/0:4,0:4:9.03:0,9,175	0/0:16,0:16:39.13:0,39,956	0/0:23,0:23:48.16:0,48,1159	0/0:19,0:19:42.13:0,42,937	0/0:17,0:17:39.13:0,39,929
chr10	89602913	.	T	TGC	22229.96	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-10.008;DP=837;FS=19.488;HRun=0;HaplotypeScore=97.7344;InbreedingCoeff=0.8955;MQ=69.77;MQ0=2;MQRankSum=-0.278;QD=38.73;ReadPosRankSum=-1.044;VQSLOD=4.6731;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,51:55:99:2159,123,0	1/1:1,7:8:21.07:370,21,0	0/1:15,0:14:43.91:111,0,44	0/0:17,0:13:2.61:0,3,137	1/1:4,27:32:63.21:1071,63,0	1/1:0,15:16:36.12:638,36,0	1/1:7,38:47:93.32:1649,93,0	1/1:7,26:34:78.21:1298,78,0	1/1:2,24:26:63.21:1092,63,0	0/0:29,0:29:84.27:0,84,1141	0/0:18,0:18:45.15:0,45,618	1/1:5,44:48:99:2073,117,0	0/0:34,0:34:99:0,102,1399	1/1:3,29:32:75.26:1328,75,0	1/1:2,25:27:66.23:1170,66,0	0/0:31,0:31:87.26:0,87,1162	1/1:3,32:36:90.31:1596,90,0	1/1:4,20:24:45.15:782,45,0	1/1:7,18:26:57.10:877,57,0	1/1:3,16:19:45.15:797,45,0	1/1:6,80:88:99:3553,202,0	1/1:2,18:20:51.17:903,51,0	0/0:17,0:17:45.14:0,45,602	0/0:50,0:50:99:0,135,1851	0/0:26,0:26:66.22:0,66,906	0/0:26,0:26:78.24:0,78,1043	1/1:4,14:17:45.15:763,45,0	0/0:15,0:15:42.12:0,42,554
chr10	89603463	.	CCCT	C	976.10	PASS	AB=0.974;AC=8;AF=0.143;AN=56;BaseQRankSum=5.632;DP=432;FS=6.184;HRun=0;HaplotypeScore=69.3421;InbreedingCoeff=0.6136;MQ=62.37;MQ0=11;MQRankSum=-4.066;QD=9.66;ReadPosRankSum=0.411;VQSLOD=2.2861;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:43.63:0,44,816	1/1:4,3:7:6.02:86,6,0	0/1:32,0:11:1.19:1,0,39	0/0:27,0:7:2.78:0,3,24	0/0:10,0:10:21.07:0,21,402	0/0:10,0:9:12.04:0,12,217	0/0:14,0:13:24.04:0,24,390	0/0:33,0:32:45:0,45,822	0/0:8,0:8:12.04:0,12,240	0/0:8,0:8:12.04:0,12,243	0/0:10,0:10:24.08:0,24,472	0/0:8,0:8:18.06:0,18,345	0/0:12,0:12:11.73:0,12,469	0/0:14,0:14:27.06:0,27,462	1/1:10,12:22:30.10:422,30,0	0/1:17,1:18:15.81:16,0,408	1/1:8,13:20:11.40:587,11,0	0/0:17,0:17:6.72:0,7,441	0/0:14,0:12:24.08:0,24,408	0/0:9,0:8:15.05:0,15,301	0/0:26,0:26:30.66:0,31,996	0/0:9,0:9:18.06:0,18,364	0/0:12,0:12:18.06:0,18,363	0/0:19,0:20:36.12:0,36,694	0/0:15,0:14:33.11:0,33,666	0/0:10,0:10:18.05:0,18,330	0/0:11,0:10:27.02:0,27,460	0/0:10,0:10:21.05:0,21,388
chr10	89603567	.	CCTCCTCTTCCT	C	226.17	PASS	AB=0.878;AC=2;AF=0.036;AN=56;BaseQRankSum=3.862;DP=617;FS=1.418;HRun=0;HaplotypeScore=153.6143;InbreedingCoeff=-0.0459;MQ=48.53;MQ0=31;MQRankSum=-3.621;QD=4.62;ReadPosRankSum=-1.200;VQSLOD=2.5423;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:13.57:0,14,981	0/0:6,0:6:6.02:0,6,180	0/0:69,0:10:8.21:0,8,296	0/0:86,0:16:23.88:0,24,297	0/0:13,0:11:12.50:0,12,285	0/1:21,0:21:95.65:96,0,497	0/1:19,9:28:99:219,0,1125	0/0:14,0:11:24.08:0,24,559	0/0:19,0:19:51.17:0,51,2068	0/0:16,0:16:48.16:0,48,1919	0/0:11,0:11:24.07:0,24,871	0/0:12,0:12:36.12:0,36,1498	0/0:19,0:19:51.04:0,51,2021	0/0:13,0:12:36.12:0,36,1595	0/0:18,0:18:36.11:0,36,945	0/0:21,0:21:63.19:0,63,2786	0/0:30,0:30:54.17:0,54,1348	0/0:17,0:17:48.12:0,48,2148	0/0:16,0:11:30.09:0,30,1048	0/0:10,0:10:21.02:0,21,459	0/0:47,0:47:99:0,123,4693	0/0:24,0:22:51.18:0,51,1466	0/0:11,0:11:33.10:0,33,1216	0/0:30,0:29:59.31:0,59,3412	0/0:12,0:12:36.06:0,36,1054	0/0:9,0:9:24.08:0,24,1063	0/0:16,0:15:45.11:0,45,1442	0/0:8,0:8:24.07:0,24,985
chr10	89603578	.	TCTC	T	889.08	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=0.815;DP=608;FS=5.128;HRun=0;HaplotypeScore=81.0970;InbreedingCoeff=0.6879;MQ=48.74;MQ0=31;MQRankSum=1.710;QD=15.07;ReadPosRankSum=3.023;VQSLOD=2.4749;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:20:4.64:0,5,19	1/1:1,4:5:6.02:82,6,0	0/0:70,1:12:20.89:0,21,324	0/0:74,0:13:12.04:0,12,216	0/0:15,0:14:11.94:0,12,147	0/0:7,0:23:5.96:0,6,78	0/0:25,0:24:11.76:0,12,396	0/0:15,0:12:9.03:0,9,175	0/0:19,0:19:42.12:0,42,765	0/0:17,0:17:33.11:0,33,617	0/0:11,0:11:18.06:0,18,333	0/1:13,0:13:11.27:11,0,473	0/0:18,0:18:42.04:0,42,732	0/0:12,0:12:33.06:0,33,520	1/1:3,13:16:30.10:424,30,0	0/0:23,1:24:23.68:0,24,1150	1/1:6,19:25:36.12:510,36,0	0/0:17,0:17:45.12:0,45,813	0/0:16,0:13:27.05:0,27,460	0/0:9,0:9:9.02:0,9,145	0/0:46,0:46:81.22:0,81,1426	0/0:26,0:23:26.88:0,27,420	0/0:11,0:10:21.02:0,21,347	0/0:32,0:31:69.24:0,69,1371	0/0:11,0:10:15.05:0,15,303	0/0:11,0:11:27.09:0,27,528	0/0:16,0:15:27.92:0,28,430	0/0:9,0:8:24.05:0,24,415
chr10	89603817	.	T	TG	1845.40	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-1.229;DP=472;FS=0.549;HRun=4;HaplotypeScore=51.0467;InbreedingCoeff=0.9502;MQ=68.28;MQ0=0;MQRankSum=-1.140;QD=28.39;ReadPosRankSum=0.782;VQSLOD=2.9290;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:28:63.17:840,63,0	0/0:7,0:7:21.06:0,21,236	0/0:12,0:13:24.54:0,25,295	0/0:12,0:12:7.82:0,8,234	0/0:17,0:17:45.11:0,45,500	1/1:2,19:21:51.17:696,51,0	1/1:2,13:15:33.11:451,33,0	0/0:29,0:29:81.23:0,81,917	0/0:12,0:11:33.09:0,33,374	0/0:18,0:18:51.14:0,51,576	0/0:17,0:17:45.13:0,45,510	0/0:14,0:14:33.09:0,33,374	0/0:19,0:19:42.10:0,42,466	0/0:12,0:12:30.08:0,30,340	0/0:17,0:17:45.09:0,45,510	0/0:9,0:9:24.07:0,24,272	0/0:29,0:29:84.12:0,84,909	0/0:16,0:16:45.13:0,45,510	0/0:24,0:23:57.14:0,57,635	0/0:11,0:11:24.05:0,24,262	0/0:29,0:29:72.20:0,72,817	0/0:13,0:13:33.08:0,33,365	0/0:9,0:9:27.08:0,27,306	0/0:19,0:19:42.12:0,42,476	0/0:14,0:14:42.12:0,42,476	0/0:15,0:15:42.12:0,42,475	0/0:27,0:27:78.22:0,78,882	0/0:5,0:5:9.03:0,9,102
chr10	89603931	.	CA	C	2261.19	PASS	AC=34;AF=0.654;AN=52;BaseQRankSum=4.767;DP=289;FS=19.978;HRun=9;HaplotypeScore=40.1041;InbreedingCoeff=0.7815;MQ=35.38;MQ0=26;MQRankSum=-6.628;QD=12.49;ReadPosRankSum=1.876;VQSLOD=1.2832;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:17:32.04:275,32,0	1/1:1,2:2:3:27,3,0	./.	./.	1/1:3,8:9:12:109,12,0	1/1:4,3:7:6:55,6,0	1/1:6,10:12:26.92:247,27,0	1/1:5,16:20:44.95:397,45,0	1/1:1,8:9:18.01:165,18,0	0/0:11,0:8:12.04:0,12,138	0/0:11,0:10:17.49:0,17,153	1/1:3,4:6:9:82,9,0	0/0:15,0:14:23.88:0,24,260	1/1:4,6:9:9:82,9,0	1/1:4,7:10:21.01:192,21,0	0/0:6,0:5:3.01:0,3,35	1/1:4,7:10:15:137,15,0	1/1:6,8:8:15.01:137,15,0	1/1:6,5:7:14.93:129,15,0	1/1:3,5:7:12:110,12,0	1/1:1,3:4:9:82,9,0	1/1:2,4:4:3:27,3,0	0/0:9,0:7:6.01:0,6,69	0/0:16,0:14:8.98:0,9,89	0/0:10,0:10:12.04:0,12,139	0/0:15,0:14:24.54:0,25,278	1/1:2,11:12:21.01:192,21,0	0/0:6,0:3:1.36:0,1,3
chr10	89604178	.	C	CGT	2448.57	PASS	AB=0.706;AC=21;AF=0.404;AN=52;BaseQRankSum=-3.809;DP=585;FS=0.632;HRun=0;HaplotypeScore=101.3605;InbreedingCoeff=0.3594;MQ=55.50;MQ0=15;MQRankSum=-2.312;QD=9.31;ReadPosRankSum=-2.702;VQSLOD=2.5151;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:38:2.84:0,3,14	1/1:6,0:10:8.49:50,8,0	./.	./.	0/1:23,6:28:74.16:74,0,86	0/0:7,0:18:5.68:0,6,28	0/0:11,0:26:8.36:0,8,40	1/1:27,3:30:18.45:343,18,0	0/1:7,9:15:12.43:252,0,12	0/0:23,0:24:29.91:0,30,309	0/0:18,0:19:32.89:0,33,349	0/1:9,7:16:18.46:167,0,18	0/0:9,0:11:17.62:0,18,160	1/1:5,6:11:12.04:182,12,0	1/1:6,0:20:12.11:70,12,0	0/0:15,0:15:20.89:0,21,215	1/1:13,0:22:9:78,9,0	1/1:4,5:10:3.94:213,4,0	1/1:10,5:13:12.04:179,12,0	0/1:10,6:17:18.78:165,0,19	0/1:14,15:32:6.05:400,0,6	0/1:6,5:11:48.95:164,0,49	0/0:17,0:18:17.88:0,18,181	0/0:35,0:38:73.52:0,74,702	0/0:15,0:16:29.92:0,30,315	0/0:24,0:23:18.04:0,18,194	0/1:12,9:20:9.45:290,0,9	0/0:9,0:11:20.63:0,21,193
chr10	89605713	.	G	GCCCTGAGAAGGGGTCCTGGCTAGCA	22124.40	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.523;DP=644;FS=1.368;HRun=0;HaplotypeScore=362.5430;InbreedingCoeff=0.9993;MQ=81.45;MQ0=0;MQRankSum=-14.085;QD=140.92;ReadPosRankSum=-0.881;VQSLOD=3.7202;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,3:35:42.14:3325,42,0	1/1:4,0:10:24.08:1632,24,0	0/0:17,0:17:39.40:0,39,1892	0/0:27,0:26:69.57:0,70,2922	0/0:17,0:17:51.17:0,51,2608	1/1:12,1:24:36.12:3235,36,0	1/1:17,0:35:87.25:7151,87,0	0/0:21,0:21:63.21:0,63,2822	0/0:25,0:25:75.26:0,75,4737	0/0:32,0:32:93.30:0,93,5155	0/0:20,0:20:60.21:0,60,3381	0/0:25,0:25:72.25:0,72,4339	0/0:20,0:20:60.21:0,60,3809	0/0:27,0:27:75.24:0,75,4389	1/1:9,3:22:36.12:3248,36,0	0/0:13,0:13:39.13:0,39,2185	1/1:12,3:31:36.12:3533,36,0	0/0:28,0:28:84.25:0,84,4919	0/0:22,0:22:59.77:0,60,3177	0/0:13,0:13:39.12:0,39,2442	0/0:33,0:33:99:0,99,5794	0/0:24,0:24:60.21:0,60,3863	0/0:18,0:18:54.16:0,54,2917	0/0:25,0:25:69.24:0,69,4252	0/0:21,0:21:57.20:0,57,3560	0/0:35,0:35:99:0,102,6066	0/0:15,0:15:45.15:0,45,2725	0/0:9,0:9:27.09:0,27,1782
chr10	89605829	.	C	CTG	811.57	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.912;DP=705;FS=4.546;HRun=0;HaplotypeScore=103.3726;InbreedingCoeff=0.9829;MQ=67.22;MQ0=0;MQRankSum=-1.516;QD=27.05;ReadPosRankSum=-2.209;VQSLOD=4.1668;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,101,1142	0/0:10,0:10:27.08:0,27,329	0/0:25,0:19:29.82:0,30,288	0/0:19,0:19:29.19:0,29,248	0/0:17,0:17:36.07:0,36,402	0/0:15,0:15:42.13:0,42,512	1/1:10,19:30:52.07:906,52,0	0/0:23,0:23:33.08:0,33,377	0/0:34,0:35:84.08:0,84,992	0/0:19,0:19:36.11:0,36,439	0/0:12,0:12:21.07:0,21,257	0/0:35,0:37:86.94:0,87,1016	0/0:28,0:29:81.06:0,81,942	0/0:38,0:41:87.04:0,87,980	0/0:20,0:20:45.10:0,45,522	0/0:18,0:18:39.12:0,39,477	0/0:29,0:29:69.16:0,69,820	0/0:33,0:34:81.07:0,81,956	0/0:20,0:20:33.09:0,33,382	0/0:18,0:18:30.05:0,30,350	0/0:72,0:74:99:0,159,1870	0/0:18,0:18:29.82:0,30,366	0/0:10,0:10:27.07:0,27,320	0/0:35,0:35:75.23:0,75,914	0/0:17,0:18:38.95:0,39,454	0/0:31,0:31:60.17:0,60,710	0/0:14,0:16:35.94:0,36,417	0/0:7,0:7:18.06:0,18,220
chr10	89606037	.	C	CCCA	2046.80	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.611;DP=565;FS=20.650;HRun=0;HaplotypeScore=87.6737;InbreedingCoeff=0.7955;MQ=69.77;MQ0=5;MQRankSum=1.214;QD=26.24;ReadPosRankSum=-3.395;VQSLOD=1.3352;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,21:36:49.11:959,49,0	0/0:9,0:8:12.04:0,12,167	0/0:29,0:12:9.03:0,9,112	0/0:20,0:17:0.37:0,0,37	0/0:13,0:13:24.08:0,24,319	1/1:3,11:14:24.08:478,24,0	1/1:13,14:28:39.13:750,39,0	0/0:18,0:18:27.09:0,27,361	0/0:20,0:20:42.09:0,42,542	0/0:9,0:9:12.03:0,12,153	0/0:6,0:6:5.75:0,6,83	0/0:27,0:27:45.13:0,45,594	0/0:30,0:30:57.18:0,57,762	0/0:30,0:30:60.20:0,60,814	0/0:26,0:26:54.17:0,54,737	0/0:20,0:22:54.11:0,54,711	0/0:28,0:28:60.18:0,60,794	0/0:22,0:22:48.16:0,48,641	0/0:20,0:20:18.03:0,18,207	0/0:13,0:13:21.07:0,21,288	0/0:32,0:32:38.54:0,39,525	0/0:16,0:16:23.97:0,24,334	0/0:13,0:13:24.07:0,24,307	0/0:32,0:32:72.24:0,72,984	0/0:16,0:16:39.09:0,39,505	0/0:16,0:15:24.08:0,24,334	0/0:18,0:18:42.14:0,42,585	0/0:2,0:2:3.01:0,3,42
chr10	89606262	.	C	CCTCT	25636.81	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-14.233;DP=602;FS=5.820;HRun=0;HaplotypeScore=90.4197;InbreedingCoeff=0.9316;MQ=66.50;MQ0=0;MQRankSum=-6.424;QD=60.46;ReadPosRankSum=0.274;VQSLOD=6.6241;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:35:78.27:2133,78,0	1/1:2,9:11:27.09:725,27,0	0/0:10,0:10:15.10:0,15,403	0/1:8,0:8:6.79:7,0,300	1/1:4,19:23:30.09:808,30,0	1/1:1,15:16:39.13:1067,39,0	1/1:0,34:37:87.02:2380,87,0	1/1:7,20:28:81.23:1963,81,0	1/1:0,8:12:18.06:493,18,0	0/0:13,0:13:39.13:0,39,725	0/0:9,0:9:21.04:0,21,327	1/1:1,32:33:75.26:2042,75,0	0/0:29,0:29:87.26:0,87,1607	1/1:1,17:20:48.16:1313,48,0	1/1:1,25:26:69.10:1888,69,0	0/0:20,0:20:57.20:0,57,1105	1/1:3,38:41:99:2865,105,0	1/1:2,21:24:57.20:1560,57,0	1/1:4,17:25:72.10:1469,72,0	1/1:2,9:12:21.07:573,21,0	1/1:3,32:36:80.81:2216,81,0	1/1:2,13:16:30.10:821,30,0	0/0:13,0:13:36.11:0,36,665	0/0:29,0:29:87.28:0,87,1629	0/0:18,0:18:51.16:0,51,955	0/0:30,0:30:81.28:0,81,1563	1/1:1,19:21:48.16:1314,48,0	0/0:7,0:7:21.07:0,21,407
chr10	89606516	.	A	AC	1066.68	PASS	AB=0.754;AC=12;AF=0.222;AN=54;BaseQRankSum=6.549;DP=458;FS=0.000;HRun=0;HaplotypeScore=71.3732;InbreedingCoeff=-0.0985;MQ=49.54;MQ0=35;MQRankSum=-4.690;QD=8.14;ReadPosRankSum=-3.447;VQSLOD=2.5641;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:21:60.20:0,60,838	0/1:2,1:4:13.95:60,0,14	0/0:41,0:1:3.01:0,3,42	./.	0/0:5,3:8:8.96:0,9,125	0/1:5,5:10:99:213,0,122	0/0:12,0:12:32.14:0,32,426	0/0:14,0:13:39.13:0,39,545	0/1:8,2:9:68.67:69,0,222	0/0:15,0:15:45.15:0,45,629	0/0:5,0:5:15.04:0,15,193	0/1:9,4:13:99:158,0,224	0/0:25,0:25:72.24:0,72,1002	0/1:9,7:16:99:239,0,331	0/1:4,4:12:20.59:56,0,21	0/0:16,0:16:45.15:0,45,627	1/1:3,2:8:10.75:97,11,0	0/1:15,1:18:5.34:5,0,354	0/1:13,1:12:11.81:12,0,408	0/0:2,5:7:6.02:0,6,83	0/0:38,3:42:2.46:0,2,1166	0/1:9,1:9:4.92:5,0,224	0/0:9,0:8:24.08:0,24,335	0/0:35,0:35:99:0,105,1417	0/0:15,0:15:45.14:0,45,611	0/0:15,0:15:42.14:0,42,587	0/1:6,10:15:99:299,0,172	0/0:11,0:11:33.11:0,33,459
chr10	89606538	.	A	AC	2199.32	PASS	AB=0.857;AC=18;AF=0.321;AN=56;BaseQRankSum=1.447;DP=471;FS=0.000;HRun=0;HaplotypeScore=73.9638;InbreedingCoeff=0.0057;MQ=50.87;MQ0=53;MQRankSum=-1.023;QD=9.60;ReadPosRankSum=-4.109;VQSLOD=2.6333;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:23:66.22:0,66,922	1/1:1,2:3:9.03:135,9,0	0/1:40,0:3:8.40:8,0,71	0/0:30,0:3:6.01:0,6,67	0/1:7,1:8:36.90:37,0,75	0/0:14,0:14:36.12:0,36,494	0/0:18,0:18:44.18:0,44,593	0/1:8,1:7:99:122,0,108	0/1:7,6:12:99:257,0,137	0/0:13,0:13:36.11:0,36,489	0/0:6,0:6:18.06:0,18,252	0/1:17,5:22:99:231,0,449	0/0:23,0:22:66.22:0,66,921	0/1:15,1:16:26.82:27,0,495	1/1:0,13:13:27.09:430,27,0	0/0:16,0:16:48.16:0,48,661	1/1:1,8:9:24.06:358,24,0	0/1:8,7:15:99:250,0,219	0/1:10,3:9:71.60:72,0,213	0/1:9,0:9:8.95:9,0,152	0/1:28,9:35:99:222,0,756	0/1:6,1:6:29.91:30,0,189	0/0:10,0:9:27.09:0,27,375	0/0:38,0:38:99:0,108,1485	0/0:21,0:21:63.21:0,63,881	0/0:18,0:18:54.18:0,54,756	0/1:13,2:14:99:189,0,332	0/0:9,0:9:27.09:0,27,377
chr10	89606560	.	A	AC	9571.01	PASS	AB=0.545;AC=27;AF=0.482;AN=56;BaseQRankSum=-4.343;DP=539;FS=5.964;HRun=0;HaplotypeScore=68.0592;InbreedingCoeff=0.9463;MQ=60.39;MQ0=24;MQRankSum=-3.270;QD=37.68;ReadPosRankSum=0.602;VQSLOD=4.9589;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.25:0,87,1169	1/1:1,4:5:12.04:191,12,0	0/0:37,0:14:39.93:0,40,451	0/0:19,0:10:27.53:0,28,348	1/1:3,13:16:24.03:383,24,0	0/0:12,0:12:36.12:0,36,504	0/0:18,0:19:51.16:0,51,698	1/1:5,15:18:45.15:710,45,0	1/1:2,12:14:25.90:388,26,0	0/0:11,0:11:30.10:0,30,419	0/0:5,0:5:15.05:0,15,209	1/1:1,20:21:57.19:911,57,0	0/0:21,0:20:57.19:0,57,797	1/1:1,19:20:57.04:909,57,0	1/1:0,21:21:63.21:1005,63,0	0/0:18,0:18:54.17:0,54,737	1/1:0,15:15:42.14:670,42,0	0/1:3,13:18:2.33:617,0,2	1/1:3,16:14:39.13:624,39,0	1/1:2,10:12:24.08:383,24,0	1/1:3,47:49:99:1822,114,0	1/1:1,7:7:18.06:288,18,0	0/0:11,0:11:33.11:0,33,461	0/0:38,0:38:99:0,114,1555	0/0:26,0:26:78.23:0,78,1040	0/0:28,0:28:81.27:0,81,1128	1/1:0,15:14:42.14:670,42,0	0/0:9,0:9:27.09:0,27,377
chr10	89607532	.	C	CAAG	8609.53	PASS	AB=0.545;AC=11;AF=0.196;AN=56;BaseQRankSum=-14.275;DP=664;FS=3.117;HRun=0;HaplotypeScore=88.3615;InbreedingCoeff=0.8682;MQ=73.78;MQ0=0;MQRankSum=-4.041;QD=49.48;ReadPosRankSum=0.232;VQSLOD=6.5068;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,34:39:84.29:1789,84,0	0/1:2,9:12:16.84:554,0,17	0/0:12,0:12:6:0,6,358	0/0:19,0:19:35.29:0,35,466	0/0:17,0:17:45.15:0,45,704	1/1:4,21:25:54.19:1168,54,0	1/1:2,28:31:72.25:1559,72,0	0/0:23,0:23:57.19:0,57,890	0/0:15,0:15:36.11:0,36,541	0/0:24,0:24:57.17:0,57,850	0/0:16,0:16:42.14:0,42,657	0/0:28,0:28:81.28:0,81,1262	0/0:23,0:23:60.20:0,60,938	0/0:30,0:30:87.30:0,87,1361	1/1:5,21:26:60.21:1298,60,0	0/0:23,0:23:66.22:0,66,1033	1/1:4,37:41:99:2243,105,0	0/0:20,0:20:51.17:0,51,798	0/0:13,0:13:30.10:0,30,469	0/0:27,0:27:69.21:0,69,1035	0/0:29,0:29:75.26:0,75,1171	0/0:27,0:27:69.23:0,69,1064	0/0:25,0:25:66.21:0,66,1009	0/0:22,0:22:60.20:0,60,939	0/0:13,0:13:36.12:0,36,563	0/0:32,0:32:93.30:0,93,1415	0/0:35,0:35:90.27:0,90,1370	0/0:17,0:17:45.15:0,45,704
chr10	89607772	.	T	TG	6202.97	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-12.095;DP=557;FS=1.137;HRun=7;HaplotypeScore=62.0388;InbreedingCoeff=0.9950;MQ=86.34;MQ0=0;MQRankSum=-0.929;QD=28.07;ReadPosRankSum=1.734;VQSLOD=5.6171;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:87.10:0,87,833	0/0:8,0:8:15.02:0,15,144	0/0:30,0:29:67.46:0,67,684	0/0:18,0:19:42.65:0,43,386	1/1:3,13:16:30.09:362,30,0	0/0:18,0:18:45.06:0,45,429	0/0:19,0:19:48.08:0,48,463	1/1:3,16:19:45.14:542,45,0	1/1:3,13:16:39.59:472,40,0	0/0:15,0:15:33.05:0,33,318	0/0:16,0:16:36.04:0,36,343	1/1:4,19:23:48.15:576,48,0	0/0:17,0:17:45.07:0,45,434	1/1:5,16:23:60.03:680,60,0	0/0:23,0:24:60.07:0,60,579	0/0:13,0:13:30.03:0,30,284	0/0:18,0:18:51.02:0,51,476	1/1:2,18:21:57.17:685,57,0	1/1:2,14:16:45.14:543,45,0	1/1:2,11:13:30.05:346,30,0	1/1:5,20:25:54.17:652,54,0	1/1:1,18:19:51.16:616,51,0	0/0:11,0:11:30.05:0,30,289	0/0:35,0:35:84.08:0,84,802	0/0:21,0:21:57.09:0,57,550	0/0:31,0:31:78.10:0,78,746	1/1:3,27:30:36.59:731,37,0	0/0:5,0:5:15.02:0,15,144
chr10	89608319	.	C	CTAGA	2666.66	PASS	AB=0.526;AC=5;AF=0.089;AN=56;BaseQRankSum=-6.099;DP=517;FS=8.867;HRun=0;HaplotypeScore=94.1195;InbreedingCoeff=0.7633;MQ=79.48;MQ0=0;MQRankSum=-1.373;QD=45.98;ReadPosRankSum=1.711;VQSLOD=4.2328;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.25:0,78,1415	1/1:1,7:8:18.06:475,18,0	0/0:13,0:12:26.90:0,27,428	0/0:24,0:21:21.16:0,21,538	0/0:16,0:16:39.13:0,39,718	0/0:14,0:14:39.10:0,39,664	0/0:25,0:25:69.21:0,69,1219	0/0:18,0:18:51.17:0,51,948	0/0:10,0:10:27.09:0,27,504	0/0:19,0:19:57.19:0,57,1032	0/0:8,0:8:21.06:0,21,361	0/0:27,0:27:75.18:0,75,1233	0/0:8,0:8:21.05:0,21,360	0/0:18,0:18:48.16:0,48,896	1/1:2,7:9:18.06:479,18,0	0/0:11,0:11:30.10:0,30,549	0/1:4,34:41:33.72:1839,0,34	0/0:30,0:30:78.22:0,78,1418	0/0:15,0:15:42.10:0,42,733	0/0:11,0:11:27.09:0,27,497	0/0:58,0:58:99:0,169,3050	0/0:18,0:18:51.14:0,51,913	0/0:8,0:8:24.07:0,24,415	0/0:22,0:22:63.19:0,63,1134	0/0:16,0:16:48.16:0,48,876	0/0:22,0:22:60.19:0,60,1083	0/0:12,0:12:27.06:0,27,438	0/0:6,0:6:18.06:0,18,336
chr10	89611736	.	TTC	T	2546.30	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=3.592;DP=494;FS=3.490;HRun=0;HaplotypeScore=77.4969;InbreedingCoeff=0.5464;MQ=62.01;MQ0=2;MQRankSum=-1.661;QD=9.23;ReadPosRankSum=-3.806;VQSLOD=2.6410;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:27:33.05:450,33,0	1/1:9,0:9:7.56:58,8,0	0/0:22,0:11:17.44:0,17,213	0/0:17,0:11:9.55:0,10,216	0/1:28,0:26:22.18:211,0,22	1/1:13,1:13:33.56:283,34,0	1/1:12,0:12:32.53:235,33,0	1/1:29,0:27:15.17:273,15,0	1/1:7,0:7:4.32:73,4,0	0/0:19,0:19:47.24:0,47,609	0/0:21,0:21:59.97:0,60,770	1/1:16,1:17:14.62:111,15,0	0/0:11,0:11:29.92:0,30,354	1/1:13,1:14:21.86:217,22,0	0/0:9,0:9:1.25:0,1,3	0/0:11,0:11:29.84:0,30,272	1/1:18,0:15:4.20:125,4,0	0/1:27,0:26:34.41:66,0,34	1/1:14,1:13:4.56:173,5,0	0/1:16,0:16:12.58:107,0,13	0/1:14,0:14:14.28:41,0,14	1/1:13,0:13:29.99:215,30,0	0/0:17,0:17:42.01:0,42,476	0/0:29,0:29:67.72:0,68,817	0/0:20,0:20:44.95:0,45,561	0/0:22,0:21:32.08:0,32,634	0/1:16,0:16:13.16:110,0,13	0/0:20,0:20:33.87:0,34,581
chr10	89611737	.	TC	T	4339.46	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=6.328;DP=499;FS=19.201;HRun=1;HaplotypeScore=67.0897;InbreedingCoeff=0.9081;MQ=61.91;MQ0=2;MQRankSum=-2.540;QD=14.32;ReadPosRankSum=-3.193;VQSLOD=2.3141;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,1:26:32.99:296,33,0	1/1:9,0:9:9.83:74,10,0	0/0:23,1:12:23.11:0,23,219	0/1:17,0:11:1.91:2,0,179	1/1:25,4:27:49.95:427,50,0	1/1:13,1:13:35.58:343,36,0	1/1:8,4:12:32.96:316,33,0	1/1:27,1:26:56.24:436,56,0	1/1:7,0:7:18.49:122,18,0	0/0:19,0:19:28.65:0,29,471	0/0:22,0:22:58.39:0,58,592	1/1:1,16:17:15.04:190,15,0	0/0:12,0:12:28.95:0,29,269	1/1:13,1:14:34.37:329,34,0	1/1:11,0:11:8.66:59,9,0	0/0:12,0:12:7.36:0,7,176	1/1:18,0:15:34.11:206,34,0	1/1:26,1:26:49.36:331,49,0	1/1:14,1:13:31.12:256,31,0	1/1:17,0:17:36.77:267,37,0	1/1:13,0:13:24.24:148,24,0	1/1:8,5:13:33.88:287,34,0	0/0:18,0:18:26.14:0,26,388	0/0:29,0:29:60.93:0,61,601	0/0:18,0:18:43.56:0,44,450	0/0:22,0:21:28.94:0,29,485	1/1:15,1:16:32.53:250,33,0	0/0:20,0:20:6.79:0,7,429
chr10	89611847	.	ATTTCTTT	A	726.15	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.029;DP=472;FS=0.000;HRun=0;HaplotypeScore=108.9395;InbreedingCoeff=0.8190;MQ=61.31;MQ0=11;MQRankSum=-1.399;QD=33.01;ReadPosRankSum=1.895;VQSLOD=3.0211;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,8:22:56.01:821,56,0	0/0:5,0:5:12.02:0,12,190	0/0:28,0:8:6.74:0,7,123	0/0:33,0:14:14.18:0,14,163	0/0:18,0:18:38.36:0,38,450	0/0:13,0:12:27.89:0,28,449	0/0:24,0:24:54.76:0,55,748	0/0:17,0:16:36.84:0,37,386	0/0:11,0:11:29.66:0,30,303	0/0:17,0:17:40.82:0,41,935	0/0:11,0:11:20.99:0,21,457	0/0:4,0:4:8.97:0,9,89	0/0:8,0:8:20.91:0,21,368	0/0:13,0:14:30.39:0,30,391	0/0:13,0:13:23.63:0,24,410	0/0:14,0:14:38.99:0,39,706	0/0:26,0:26:35.04:0,35,743	0/0:17,0:18:39.80:0,40,431	0/0:16,0:16:43.55:0,44,383	0/0:20,0:21:30.25:0,30,468	0/0:12,0:14:27.04:0,27,400	0/0:13,0:12:23.93:0,24,261	0/0:22,0:22:54.89:0,55,984	0/0:17,0:17:29.98:0,30,558	0/0:21,0:21:29.91:0,30,543	0/0:22,0:22:59.16:0,59,1193	0/0:14,0:13:32.66:0,33,390	0/0:12,0:13:30.02:0,30,732
chr10	89611848	.	TTTC	T	527.37	PASS	AB=0.951;AC=13;AF=0.232;AN=56;BaseQRankSum=6.604;DP=467;FS=22.611;HRun=0;HaplotypeScore=76.2814;InbreedingCoeff=-0.0930;MQ=61.31;MQ0=12;MQRankSum=-5.156;QD=2.70;ReadPosRankSum=0.534;VQSLOD=0.1081;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:48.49:499,48,0	0/1:5,0:5:9.03:9,0,62	0/1:28,0:8:2.23:2,0,68	0/0:34,0:14:4.93:0,5,86	0/1:18,0:18:3.72:4,0,139	0/1:14,1:12:17.56:18,0,92	0/1:24,0:24:9.33:9,0,195	0/0:17,0:16:8.93:0,9,138	0/0:11,0:11:3.45:0,3,102	0/0:16,0:16:32.99:0,33,416	0/0:11,0:11:20.95:0,21,254	0/1:3,1:4:18.05:31,0,18	0/0:8,0:8:20.84:0,21,212	0/1:13,0:13:9.10:9,0,90	0/0:13,0:13:18.90:0,19,192	0/0:13,0:13:23.78:0,24,329	0/0:28,0:28:23.32:0,23,333	0/1:17,1:18:18.67:19,0,147	0/1:15,1:16:30.73:31,0,133	0/1:17,2:18:22.56:23,0,158	0/0:15,0:15:16.48:0,16,163	0/0:14,0:13:10.32:0,10,127	0/0:21,0:21:33.82:0,34,442	0/0:18,0:18:18.70:0,19,237	0/0:20,0:20:12.84:0,13,158	0/0:21,0:21:24.43:0,24,526	0/1:13,1:13:23.30:23,0,145	0/0:12,0:12:25.83:0,26,330
chr10	89613805	.	TG	T	728.44	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.402;DP=646;FS=11.761;HRun=4;HaplotypeScore=67.5791;InbreedingCoeff=0.9893;MQ=81.71;MQ0=1;MQRankSum=-5.558;QD=25.12;ReadPosRankSum=0.286;VQSLOD=1.9251;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,1830	0/0:10,0:10:30.09:0,30,402	0/0:18,0:18:40.80:0,41,589	0/0:21,0:20:54.17:0,54,728	0/0:23,0:23:69.21:0,69,934	1/1:2,5:7:15.04:180,15,0	1/1:3,19:22:57.13:667,57,0	0/0:27,0:27:78.25:0,78,1078	0/0:30,0:30:87.26:0,87,1184	0/0:21,0:21:48.16:0,48,663	0/0:16,0:16:42.13:0,42,572	0/0:25,0:25:72.24:0,72,1008	0/0:21,0:21:63.21:0,63,876	0/0:24,0:24:72.24:0,72,1008	0/0:22,0:22:66.22:0,66,924	0/0:22,0:22:66.17:0,66,887	0/0:39,0:39:99:0,117,1618	0/0:19,0:19:51.17:0,51,712	0/0:22,0:22:57.16:0,57,764	0/0:23,0:23:66.20:0,66,890	0/0:54,0:54:99:0,150,2053	0/0:15,0:15:39.13:0,39,545	0/0:17,0:17:51.16:0,51,692	0/0:19,0:19:57.15:0,57,776	0/0:33,0:33:96.30:0,96,1306	0/0:25,0:25:75.24:0,75,1035	0/0:20,0:19:57.19:0,57,797	0/0:7,0:7:21.06:0,21,277
chr10	89613828	.	C	CCG	417.39	PASS	AB=0.538;AC=2;AF=0.036;AN=56;BaseQRankSum=6.599;DP=637;FS=4.200;HRun=0;HaplotypeScore=86.7936;InbreedingCoeff=0.1809;MQ=84.93;MQ0=1;MQRankSum=-4.784;QD=8.70;ReadPosRankSum=-1.017;VQSLOD=3.0110;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,1991	0/0:8,0:8:23.87:0,24,245	0/0:22,0:22:53.98:0,54,822	0/0:22,0:21:50.99:0,51,743	0/0:21,0:21:53.94:0,54,714	0/1:1,1:15:4.91:108,0,5	0/1:7,0:33:40.63:398,0,41	0/0:21,0:21:57.01:0,57,756	0/0:27,0:27:77.96:0,78,1142	0/0:20,0:20:56.93:0,57,701	0/0:17,0:17:45.11:0,45,663	0/0:30,0:30:90.24:0,90,1375	0/0:21,0:21:54.14:0,54,844	0/0:21,0:21:63.08:0,63,909	0/0:21,0:21:60.11:0,60,912	0/0:26,0:26:75.23:0,75,1166	0/0:31,0:31:90.09:0,90,1294	0/0:19,0:19:57.16:0,57,880	0/0:23,0:23:62.79:0,63,898	0/0:18,0:18:42.06:0,42,594	0/0:44,0:44:99:0,129,2005	0/0:17,0:17:42.01:0,42,580	0/0:14,0:14:36.05:0,36,550	0/0:16,0:16:44.96:0,45,612	0/0:27,0:27:74.14:0,74,1053	0/0:21,0:21:54.11:0,54,793	0/0:2,0:25:15.48:0,15,75	0/0:9,0:9:24.08:0,24,387
chr10	89614366	.	CCT	C	101.48	PASS	AB=0.979;AC=11;AF=0.196;AN=56;BaseQRankSum=-2.999;DP=708;FS=20.679;HRun=0;HaplotypeScore=112.9614;InbreedingCoeff=-0.0089;MQ=75.16;MQ0=26;MQRankSum=1.542;QD=0.43;ReadPosRankSum=0.979;VQSLOD=0.1525;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:40:5.62:6,0,383	0/0:4,0:4:2.97:0,3,20	1/1:74,0:35:2.59:8,3,0	0/0:78,0:34:2.03:0,2,5	0/0:20,0:20:11.98:0,12,99	0/0:26,0:26:17.83:0,18,130	0/0:30,0:30:12.46:0,12,102	0/0:38,0:38:4.52:0,5,144	0/0:28,0:28:29.97:0,30,253	0/0:13,0:13:5.02:0,5,89	0/1:14,0:14:29.38:29,0,32	0/0:21,0:21:20.98:0,21,178	0/1:8,0:7:14.48:14,0,55	0/0:17,0:17:8.94:0,9,70	0/0:17,0:16:3:0,3,26	0/1:13,0:13:31.93:32,0,62	0/0:27,0:28:36.14:0,36,301	0/0:18,0:18:34.94:0,35,272	0/0:14,0:14:3.85:0,4,22	0/0:14,0:13:11.84:0,12,86	0/0:43,0:40:30.45:0,30,256	0/0:18,0:17:5.99:0,6,51	1/1:12,0:12:2.08:22,2,0	0/1:24,0:24:37.52:38,0,154	0/1:19,0:17:11.37:11,0,51	0/1:24,5:27:74.43:74,0,123	0/0:27,0:26:12.61:0,13,220	0/0:16,0:11:7.88:0,8,50
chr10	89614402	.	TCACACACACA	T	1324.16	PASS	AB=0.927;AC=11;AF=0.250;AN=44;BaseQRankSum=-0.023;DP=506;FS=28.992;HRun=0;HaplotypeScore=137.1159;InbreedingCoeff=0.1506;MQ=45.49;MQ0=33;MQRankSum=1.377;QD=7.20;ReadPosRankSum=-1.985;VQSLOD=0.8878;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:5,0:5:3.01:0,3,49	./.	./.	./.	./.	0/0:22,0:17:1.36:0,1,3	0/0:24,0:20:1.82:0,2,6	0/1:20,7:27:10.82:78,0,11	0/0:11,0:11:14.98:0,15,434	0/0:10,0:10:15.05:0,15,562	0/1:15,0:15:16.24:190,0,16	0/0:13,0:12:27.08:0,27,903	0/1:14,0:15:10.77:149,0,11	0/1:8,0:9:2.97:62,0,3	0/0:14,0:14:9.03:0,9,324	0/1:28,0:30:4.47:4,0,154	0/1:19,0:17:28.90:297,0,29	0/0:9,0:8:0:0,0,0	1/1:10,1:11:0.47:1,0,0	0/1:36,0:32:1.31:338,0,1	0/0:13,3:15:2.97:0,3,20	./.	0/0:39,0:35:51.17:0,51,1662	0/0:15,0:12:15.04:0,15,343	0/0:25,0:23:29.12:0,29,967	1/1:16,0:18:12.04:326,12,0	0/0:10,0:7:12.04:0,12,480
chr10	89615098	.	GAAAAAAAGA	G	5452.56	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.879;DP=593;FS=13.468;HRun=0;HaplotypeScore=147.9499;InbreedingCoeff=0.9882;MQ=58.33;MQ0=10;MQRankSum=-12.301;QD=39.51;ReadPosRankSum=1.913;VQSLOD=3.8653;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,25:33:51.16:1320,51,0	1/1:2,7:9:12.04:331,12,0	0/0:30,0:15:21.72:0,22,729	0/0:29,0:15:24.08:0,24,762	0/0:23,0:21:54.19:0,54,2474	1/1:9,23:32:57.18:1571,57,0	1/1:8,17:25:33.11:910,33,0	0/0:22,0:22:48.16:0,48,2162	0/0:13,0:13:27.09:0,27,1240	0/0:11,0:11:30.10:0,30,1379	0/0:21,0:21:39.13:0,39,1787	0/0:21,0:21:51.18:0,51,2329	0/0:14,0:14:30.09:0,30,1267	0/0:12,0:12:24.08:0,24,1103	1/1:3,8:11:15.05:414,15,0	0/0:14,0:14:30.10:0,30,1375	1/1:10,17:27:31.38:907,31,0	0/0:36,0:34:81.28:0,81,3669	0/0:19,0:17:30.10:0,30,1241	0/0:19,0:18:54.01:0,54,2238	0/0:18,0:18:45.15:0,45,2042	0/0:23,0:23:48.16:0,48,2205	0/0:19,0:19:42.14:0,42,1875	0/0:23,0:23:54.17:0,54,2311	0/0:20,0:20:39.12:0,39,1667	0/0:21,0:21:48.16:0,48,2205	0/0:29,0:29:75.25:0,75,3282	0/0:16,0:16:48.09:0,48,1844
chr10	89617697	.	AC	A	1431.19	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.751;DP=799;FS=10.675;HRun=1;HaplotypeScore=83.3465;InbreedingCoeff=0.9603;MQ=59.97;MQ0=7;MQRankSum=-2.945;QD=29.82;ReadPosRankSum=-2.774;VQSLOD=1.6885;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,148,2317	0/0:14,0:14:42.14:0,42,669	0/0:12,0:5:12.04:0,12,184	0/0:13,0:7:10.05:0,10,174	0/0:29,0:29:84.29:0,84,1333	1/1:5,17:22:52.87:716,53,0	1/1:4,22:26:60.94:837,61,0	0/0:40,0:40:99:0,120,1889	0/0:32,0:32:96.31:0,96,1503	0/0:38,0:38:99:0,111,1733	0/0:35,0:35:99:0,105,1640	0/0:21,0:21:60.05:0,60,945	0/0:36,0:36:99:0,108,1714	0/0:23,0:23:66.22:0,66,1031	0/0:29,0:29:87.28:0,87,1356	0/0:24,0:24:72.25:0,72,1151	0/0:45,0:45:99:0,129,2015	0/0:32,0:32:90.31:0,90,1434	0/0:18,0:18:51.15:0,51,767	0/0:33,0:33:99:0,99,1575	0/0:32,0:32:90.28:0,90,1393	0/0:27,0:27:75.11:0,75,1175	0/0:31,0:30:90.31:0,90,1436	0/0:21,0:21:60.19:0,60,932	0/0:36,0:36:99:0,108,1681	0/0:42,0:42:99:0,126,1986	0/0:29,0:29:84.29:0,84,1335	0/0:9,0:8:24.08:0,24,375
chr10	89617709	.	A	AATAC	1701.18	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.136;DP=786;FS=5.890;HRun=0;HaplotypeScore=129.8394;InbreedingCoeff=0.9577;MQ=58.49;MQ0=6;MQRankSum=-6.657;QD=37.80;ReadPosRankSum=-3.224;VQSLOD=2.9979;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,99,1603	0/0:15,0:15:21.07:0,21,349	0/0:16,0:6:15.05:0,15,241	0/0:13,0:5:9.03:0,9,138	0/0:30,0:30:72.22:0,72,1132	1/1:10,6:19:36.11:767,36,0	1/1:14,7:26:48.16:1055,48,0	0/0:46,0:46:96.31:0,96,1509	0/0:30,0:30:60.19:0,60,973	0/0:38,0:38:87.30:0,87,1428	0/0:30,0:30:57.17:0,57,884	0/0:24,0:24:60.18:0,60,921	0/0:33,0:33:72.25:0,72,1199	0/0:20,0:20:51.17:0,51,825	0/0:25,0:25:63.22:0,63,1040	0/0:25,0:25:60.21:0,60,999	0/0:41,0:41:90.26:0,90,1479	0/0:35,0:36:60.50:0,60,1277	0/0:17,0:18:20.15:0,20,309	0/0:33,0:33:84.28:0,84,1358	0/0:29,0:29:54.17:0,54,872	0/0:29,0:29:69.24:0,69,1139	0/0:31,0:31:75.23:0,75,1182	0/0:25,0:25:48.16:0,48,799	0/0:36,0:36:87.30:0,87,1410	0/0:40,0:40:99:0,102,1664	0/0:25,0:25:66.21:0,66,1056	0/0:10,0:10:24.08:0,24,382
chr10	89619039	.	T	TA	498.75	PASS	AB=0.924;AC=18;AF=0.321;AN=56;BaseQRankSum=3.483;DP=543;FS=1.128;HRun=14;HaplotypeScore=100.2706;InbreedingCoeff=0.3111;MQ=72.42;MQ0=6;MQRankSum=-3.237;QD=2.05;ReadPosRankSum=-2.113;VQSLOD=-0.1583;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:19:21.58:96,22,0	1/1:10,0:18:7.26:88,7,0	0/0:29,0:15:11.79:0,12,65	0/0:32,0:14:5.38:0,5,36	0/1:26,0:28:1.24:1,0,211	1/1:5,8:13:5.20:167,5,0	0/1:7,8:16:15.10:107,0,15	0/1:14,1:16:6.44:6,0,175	0/1:13,1:15:7.52:8,0,144	0/0:14,0:16:31.89:0,32,188	0/1:20,1:24:15.50:15,0,221	0/0:6,0:7:10.48:0,10,54	0/0:14,0:14:18.32:0,18,165	0/1:20,1:21:9.38:9,0,190	1/1:5,0:8:8.58:45,9,0	0/0:18,0:19:51.32:0,51,319	1/1:26,0:26:7.25:106,7,0	0/0:20,2:22:5.69:0,6,163	0/1:13,0:15:1.64:2,0,52	0/1:22,1:23:15.50:16,0,152	0/0:17,0:17:23.38:0,23,149	0/0:17,0:18:32.40:0,32,209	0/0:17,0:20:29.63:0,30,170	0/0:13,0:15:33.52:0,34,203	0/0:16,0:17:30.94:0,31,186	0/0:20,0:21:25.41:0,25,157	0/0:21,2:27:6.60:0,7,269	0/0:24,0:24:51.50:0,52,316
chr10	89619051	.	A	AAG	308.44	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=4.685;DP=581;FS=5.534;HRun=0;HaplotypeScore=98.5237;InbreedingCoeff=0.4776;MQ=68.47;MQ0=9;MQRankSum=-0.584;QD=7.01;ReadPosRankSum=0.827;VQSLOD=2.4924;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:18:9.49:385,9,0	0/1:17,0:17:1.93:2,0,134	0/0:40,0:15:26.74:0,27,277	0/0:49,0:22:28.69:0,29,216	0/0:30,0:30:80.88:0,81,830	0/0:15,0:15:36.01:0,36,246	0/0:14,0:15:17.58:0,18,188	0/0:25,0:25:66.40:0,66,703	0/0:15,0:15:41.94:0,42,469	0/0:18,0:18:54.05:0,54,583	0/0:27,0:27:55.23:0,55,733	0/0:9,0:9:27.01:0,27,263	0/0:13,0:13:39.06:0,39,451	0/0:21,0:21:59.66:0,60,651	0/1:8,0:8:20.22:20,0,42	0/0:21,0:21:63.11:0,63,752	0/0:26,0:26:43.24:0,43,442	0/0:17,0:17:44.86:0,45,479	0/0:14,0:14:33.87:0,34,323	0/0:23,0:23:49.13:0,49,529	0/0:19,0:19:33.95:0,34,470	0/0:17,0:17:48.10:0,48,553	0/0:19,0:19:51:0,51,533	0/0:15,0:15:45.03:0,45,509	0/0:19,0:19:51.09:0,51,576	0/0:20,0:20:51.05:0,51,543	0/0:29,0:29:80.67:0,81,852	0/0:21,0:21:56.94:0,57,676
chr10	89619053	.	AG	A	647.22	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.812;DP=563;FS=11.328;HRun=1;HaplotypeScore=80.7261;InbreedingCoeff=0.8707;MQ=68.03;MQ0=9;MQRankSum=-4.295;QD=9.25;ReadPosRankSum=-3.081;VQSLOD=-0.6106;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:18:18.07:188,18,0	1/1:15,2:17:32.54:202,33,0	0/0:40,0:15:16.65:0,17,219	0/0:46,1:20:8.35:0,8,166	0/0:29,1:30:29.98:0,30,597	0/0:15,0:15:6.52:0,7,195	0/0:13,0:14:16.80:0,17,147	0/0:25,0:25:14.72:0,15,553	0/0:15,0:15:39.86:0,40,391	0/0:18,0:18:41.82:0,42,463	0/0:25,0:25:24.93:0,25,516	0/0:9,0:9:0.85:0,1,161	0/0:13,0:13:30.28:0,30,283	0/0:19,1:20:24.80:0,25,449	1/1:6,2:8:14.57:99,15,0	0/0:21,0:21:50.40:0,50,590	1/1:26,0:26:35.76:314,36,0	0/0:17,0:17:40.63:0,41,378	0/0:12,0:12:29.48:0,29,259	0/0:19,0:19:17.87:0,18,333	0/0:19,0:19:13.31:0,13,340	0/0:16,0:16:40.32:0,40,377	0/0:19,0:19:42.98:0,43,434	0/0:15,0:15:37.09:0,37,338	0/0:19,0:19:48.87:0,49,446	0/0:18,0:18:46.29:0,46,430	0/0:28,1:29:55.73:0,56,555	0/0:18,0:18:20.46:0,20,465
chr10	89619197	.	C	CA	14549.48	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-10.580;DP=617;FS=2.286;HRun=3;HaplotypeScore=62.1193;InbreedingCoeff=0.9946;MQ=73.87;MQ0=0;MQRankSum=-0.995;QD=37.40;ReadPosRankSum=1.249;VQSLOD=5.3358;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:81.27:1134,81,0	1/1:0,5:5:12.04:168,12,0	0/0:17,0:17:33.02:0,33,353	0/0:14,0:14:19.64:0,20,224	1/1:1,26:27:72.20:986,72,0	1/1:0,19:19:48.16:672,48,0	1/1:1,19:20:57.19:798,57,0	1/1:6,39:45:99:1557,117,0	1/1:2,28:30:81.27:1134,81,0	0/0:20,0:20:60.18:0,60,720	0/0:29,0:29:75.20:0,75,877	1/1:0,9:9:27.09:378,27,0	0/0:16,0:16:39.12:0,39,468	1/1:1,19:20:57.19:791,57,0	1/1:2,15:17:45.15:630,45,0	0/0:30,0:30:90.26:0,90,1066	1/1:0,30:30:81.27:1134,81,0	1/1:2,20:22:57.19:798,57,0	1/1:1,19:20:57.19:798,57,0	1/1:0,27:27:75.22:1029,75,0	1/1:0,23:23:66.22:924,66,0	1/1:2,13:15:33.11:462,33,0	0/0:19,0:19:54.16:0,54,648	0/0:17,0:17:48.15:0,48,576	0/0:18,0:18:54.15:0,54,635	0/0:18,0:18:48.15:0,48,576	1/1:3,29:32:84.25:1155,84,0	0/0:30,0:30:81.13:0,81,904
chr10	89619464	.	C	CT	697.51	PASS	AB=0.920;AC=5;AF=0.089;AN=56;BaseQRankSum=-3.178;DP=629;FS=0.577;HRun=11;HaplotypeScore=76.5907;InbreedingCoeff=0.3081;MQ=71.64;MQ0=3;MQRankSum=-1.319;QD=7.05;ReadPosRankSum=0.888;VQSLOD=2.1023;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,35:38:75.11:750,75,0	0/0:10,0:10:29.87:0,30,230	0/0:25,0:16:22.41:0,22,209	0/1:17,0:15:4.86:5,0,49	0/0:26,1:29:5.10:0,5,351	0/0:14,0:14:38.83:0,39,302	0/0:17,0:17:39.72:0,40,304	0/0:21,0:21:31.23:0,31,233	0/0:13,0:13:23.88:0,24,186	0/0:27,0:29:21.06:0,21,366	0/1:21,4:26:23.42:23,0,378	0/0:21,0:21:44.76:0,45,345	0/0:21,0:21:56.78:0,57,441	0/0:16,0:15:38.59:0,39,285	0/0:21,1:22:23.02:0,23,352	0/0:14,2:16:5.28:0,5,225	0/0:19,0:20:55.82:0,56,424	0/0:27,1:29:34.30:0,34,440	0/0:15,0:17:36.71:0,37,266	0/0:29,2:31:15.05:0,15,458	0/1:15,2:17:37.03:37,0,115	0/0:25,0:25:53.74:0,54,414	0/0:25,0:25:20.75:0,21,290	0/0:23,0:23:56.76:0,57,440	0/0:17,1:18:11.36:0,11,271	0/0:25,0:25:57.99:0,58,443	0/0:30,0:30:56.46:0,56,499	0/0:29,1:30:47.26:0,47,550
chr10	89619881	.	CCTCTCTCTCTCT	C	888.07	PASS	AB=1.000;AC=17;AF=0.340;AN=50;BaseQRankSum=3.489;DP=633;FS=1.138;HRun=0;HaplotypeScore=185.9241;InbreedingCoeff=0.6240;MQ=66.18;MQ0=19;MQRankSum=-2.371;QD=4.65;ReadPosRankSum=-1.722;VQSLOD=2.0675;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:27:6:0,6,90	0/0:12,0:11:12.02:0,12,391	./.	0/0:71,0:32:3.01:0,3,41	1/1:17,3:21:5.72:121,6,0	0/0:13,0:13:5.95:0,6,124	0/0:20,0:20:6.02:0,6,227	0/1:23,0:22:13.49:13,0,15	1/1:14,11:25:6.28:78,6,0	0/0:27,0:27:36.09:0,36,1097	0/0:15,0:15:8.96:0,9,288	1/1:8,13:21:5.45:136,5,0	0/0:21,0:21:27.98:0,28,1192	./.	0/0:19,0:19:27.09:0,27,1127	0/0:20,0:20:27.98:0,28,1157	0/0:20,0:16:15.03:0,15,404	1/1:7,4:9:3.01:40,3,0	1/1:30,0:31:5.72:202,6,0	1/1:13,2:16:2.21:48,2,0	1/1:19,0:25:5.32:62,5,0	0/0:10,1:12:0:0,0,0	0/0:21,0:21:15.04:0,15,549	0/0:24,0:24:24.03:0,24,934	./.	0/0:21,0:21:24.08:0,24,604	1/1:11,2:12:15.05:349,15,0	0/0:18,0:18:19.87:0,20,312
chr10	89619934	.	GTGTGTGTGTGTA	G	589.37	PASS	AB=0.948;AC=24;AF=0.480;AN=50;BaseQRankSum=4.379;DP=530;FS=11.408;HRun=0;HaplotypeScore=163.8622;InbreedingCoeff=0.3394;MQ=42.80;MQ0=35;MQRankSum=-4.278;QD=1.82;ReadPosRankSum=0.608;VQSLOD=2.4016;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:24.08:0,24,834	1/1:7,0:6:1.51:20,2,0	./.	./.	0/1:20,0:18:0:0,0,0	0/1:5,13:17:0:0,0,0	1/1:4,23:25:3.01:55,3,0	0/1:27,0:23:99:130,0,138	1/1:28,0:27:5.77:41,6,0	0/0:17,0:15:19.62:0,20,1124	0/0:8,0:7:6.02:0,6,318	1/1:24,0:24:6.89:38,7,0	0/1:24,0:22:4.85:5,0,1531	1/1:17,0:17:3.01:38,3,0	./.	0/0:16,0:16:6.01:0,6,1161	1/1:17,0:11:6.02:143,6,0	0/1:13,0:8:45.85:46,0,118	0/1:24,0:21:17.05:156,0,17	1/1:22,0:22:2.84:14,3,0	0/0:33,0:26:4.81:0,5,30	0/1:17,0:17:0.05:0,0,0	0/1:20,0:18:1.41:1,0,959	0/0:29,0:29:25.19:0,25,2136	0/0:13,0:13:15.05:0,15,696	0/0:28,0:28:26.87:0,27,3115	1/1:19,0:19:8.75:52,9,0	0/0:11,0:9:27.02:0,27,887
chr10	89619936	.	GTGTGTGTGTA	G	1079.44	PASS	AB=1.000;AC=27;AF=0.563;AN=48;BaseQRankSum=5.113;DP=526;FS=7.452;HRun=0;HaplotypeScore=152.9419;InbreedingCoeff=0.3587;MQ=42.65;MQ0=35;MQRankSum=-2.973;QD=2.93;ReadPosRankSum=-0.147;VQSLOD=1.6184;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:23.29:0,23,642	1/1:7,0:6:1.84:20,2,0	./.	./.	0/1:21,0:19:0:0,0,0	./.	1/1:27,0:25:3.01:36,3,0	0/1:26,0:22:19.11:185,0,19	1/1:28,0:27:20.86:156,21,0	0/0:17,0:15:19.37:0,19,923	0/0:8,0:7:6.02:0,6,270	1/1:23,0:23:11.88:86,12,0	0/1:22,0:20:4.85:5,0,1280	1/1:17,0:17:3.01:55,3,0	./.	0/0:16,0:16:6.01:0,6,979	1/1:7,10:12:6.02:175,6,0	0/1:13,0:8:45.04:90,0,45	1/1:26,0:22:27.99:286,28,0	1/1:22,0:22:3.01:32,3,0	1/1:35,0:28:2.94:20,3,0	0/1:17,0:17:0:0,0,0	0/1:19,0:17:4.18:4,0,775	0/1:29,0:29:19.60:20,0,1751	0/0:13,0:13:15.05:0,15,573	0/0:29,0:29:29.36:0,29,2595	1/1:20,0:20:8.91:67,9,0	0/0:10,0:9:26.89:0,27,696
chr10	89619938	.	GTGTGTGTA	G	1629.84	PASS	AB=0.987;AC=27;AF=0.587;AN=46;BaseQRankSum=5.172;DP=516;FS=3.657;HRun=0;HaplotypeScore=141.5811;InbreedingCoeff=0.4259;MQ=42.76;MQ0=34;MQRankSum=-3.509;QD=4.75;ReadPosRankSum=-1.559;VQSLOD=2.5250;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:1:0,1,444	1/1:9,0:8:5.15:46,5,0	./.	./.	./.	./.	1/1:26,0:25:2.94:18,3,0	1/1:26,0:22:47.86:298,48,0	1/1:27,1:27:20.59:273,21,0	0/0:18,0:16:22.15:0,22,784	0/0:8,0:7:6.02:0,6,222	1/1:23,0:23:11.90:133,12,0	0/1:22,0:20:4.92:5,0,1044	1/1:4,13:17:3.01:72,3,0	./.	0/0:16,0:16:6.01:0,6,811	1/1:17,0:12:6.02:138,6,0	0/1:13,1:9:21.22:166,0,21	1/1:12,12:20:37.22:410,37,0	1/1:20,0:20:2.98:48,3,0	1/1:34,0:27:5.98:70,6,0	0/1:17,0:17:0.08:0,0,0	0/1:19,0:17:4.13:4,0,630	0/1:27,0:27:19.46:19,0,1418	0/0:12,0:12:15.05:0,15,451	0/0:30,0:30:16.23:0,16,2055	1/1:5,15:20:8.92:86,9,0	0/0:10,0:9:26.87:0,27,540
chr10	89619940	.	GTGTGTA	G	2013.67	PASS	AB=0.909;AC=31;AF=0.620;AN=50;BaseQRankSum=4.733;DP=514;FS=2.603;HRun=0;HaplotypeScore=131.7699;InbreedingCoeff=0.3137;MQ=43.02;MQ0=34;MQRankSum=-2.810;QD=4.81;ReadPosRankSum=-2.067;VQSLOD=2.0794;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:39.87:40,0,267	1/1:8,0:7:5.13:46,5,0	./.	./.	0/1:9,12:19:0:0,0,0	0/1:15,0:15:0:0,0,0	1/1:26,0:25:2.92:17,3,0	1/1:25,0:21:56.22:367,56,0	1/1:28,1:28:22.39:401,22,0	0/0:17,0:15:21.92:0,22,626	0/1:8,0:7:9.96:10,0,165	1/1:22,0:22:9.82:170,10,0	0/0:24,0:22:1.02:0,1,853	1/1:17,0:17:3.01:64,3,0	./.	0/0:18,0:18:9.01:0,9,668	1/1:17,0:12:6.02:110,6,0	0/1:14,0:9:4.03:170,0,4	1/1:23,0:19:37.59:436,38,0	1/1:6,14:20:3.01:66,3,0	1/1:34,0:28:9.01:143,9,0	0/1:3,14:17:0.07:0,0,0	0/1:17,0:15:4.25:4,0,485	0/1:27,0:27:16.26:16,0,1109	0/0:13,0:13:18.05:0,18,353	0/1:30,0:30:2.53:3,0,1502	1/1:19,1:20:8.92:104,9,0	0/0:10,0:9:25.58:0,26,384
chr10	89620927	.	AGATGGATG	A	3910.50	PASS	AB=0.694;AC=22;AF=0.407;AN=54;BaseQRankSum=6.276;DP=631;FS=6.382;HRun=0;HaplotypeScore=156.0277;InbreedingCoeff=0.7542;MQ=59.99;MQ0=16;MQRankSum=-7.806;QD=14.76;ReadPosRankSum=-0.913;VQSLOD=2.1477;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:40:22.35:103,0,22	0/0:6,0:8:6.02:0,6,194	./.	0/0:29,0:10:0:0,0,0	1/1:6,14:20:2.89:75,3,0	0/0:16,0:25:27.08:0,27,663	0/0:37,0:37:19.61:0,20,367	1/1:10,10:19:30.06:428,30,0	1/1:6,6:12:12.04:276,12,0	0/0:19,0:19:39.11:0,39,1220	0/0:14,0:12:24.08:0,24,975	1/1:7,17:24:33.11:823,33,0	0/0:21,0:21:33.11:0,33,1283	1/1:16,8:24:24.08:546,24,0	0/0:8,0:28:39.13:0,39,1320	0/0:20,0:20:36.11:0,36,1153	0/0:20,0:35:43.39:0,43,1376	1/1:14,9:23:9.03:223,9,0	1/1:11,4:14:12.04:296,12,0	1/1:4,8:12:15.05:362,15,0	0/1:36,15:50:41.30:81,0,41	1/1:5,6:11:12.04:261,12,0	0/0:13,0:14:25.88:0,26,793	0/0:48,0:48:64.44:0,64,2337	0/0:17,0:17:30.10:0,30,1130	0/0:16,0:16:36.11:0,36,1327	1/1:7,6:13:18.06:435,18,0	0/0:15,0:15:45.15:0,45,1752
chr10	89621710	.	GAA	G	4474.65	PASS	AB=0.903;AC=26;AF=0.464;AN=56;BaseQRankSum=0.299;DP=522;FS=13.314;HRun=3;HaplotypeScore=111.0623;InbreedingCoeff=0.4137;MQ=51.59;MQ0=6;MQRankSum=0.063;QD=13.36;ReadPosRankSum=1.138;VQSLOD=0.9254;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:49.81:0,50,394	0/1:8,0:8:15.50:65,0,16	0/0:11,0:7:20.91:0,21,181	0/0:14,0:10:10.66:0,11,127	1/1:7,4:11:10.07:150,10,0	0/1:21,0:21:35.51:127,0,36	1/1:19,1:20:24.69:314,25,0	1/1:25,0:23:68.65:547,69,0	0/1:17,5:22:68.72:280,0,69	0/0:20,0:19:27.23:0,27,501	0/0:17,0:17:38.88:0,39,345	0/1:18,6:24:32.31:320,0,32	0/0:12,0:12:32.41:0,32,356	1/1:10,3:13:6.02:200,6,0	1/1:24,0:24:11.48:297,11,0	0/0:19,0:19:45.14:0,45,579	0/1:27,1:28:39.50:216,0,40	1/1:17,5:22:25.17:415,25,0	1/1:1,16:17:50.83:404,51,0	0/1:22,7:29:65.70:257,0,66	1/1:16,0:16:30.18:239,30,0	0/1:13,3:15:5.16:160,0,5	0/0:12,0:11:29.82:0,30,283	0/0:23,0:23:61.37:0,61,839	0/1:17,0:17:15.39:15,0,312	0/0:21,0:21:37.11:0,37,651	1/1:15,6:21:58.96:467,59,0	0/0:11,0:10:29.96:0,30,386
chr10	89621712	.	AAG	A	226.29	PASS	AB=0.977;AC=17;AF=0.354;AN=48;BaseQRankSum=5.659;DP=544;FS=6.137;HRun=0;HaplotypeScore=128.1693;InbreedingCoeff=-0.1383;MQ=50.15;MQ0=6;MQRankSum=-3.827;QD=0.76;ReadPosRankSum=2.814;VQSLOD=1.7876;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:2.97:0,3,23	0/0:10,0:10:12.01:0,12,125	./.	./.	0/1:11,0:11:5.55:6,0,6	0/1:20,0:20:3.96:4,0,145	0/0:20,0:20:0.13:0,0,102	./.	0/1:21,0:21:15.70:16,0,44	0/1:21,0:20:61.21:61,0,202	0/1:19,0:19:26.43:26,0,71	0/1:24,0:24:10.43:64,0,10	0/0:14,0:14:12.01:0,12,138	0/1:13,0:13:15.46:27,0,15	0/0:26,0:26:18.94:0,19,167	0/1:20,2:22:2.89:3,0,242	0/0:28,0:28:12.04:0,12,240	0/1:22,0:22:4.96:39,0,5	1/1:18,0:18:2.84:14,3,0	0/1:29,0:29:1.77:2,0,68	./.	0/0:16,0:15:4.12:0,4,14	0/1:14,0:13:5.53:6,0,150	0/0:24,0:24:35.91:0,36,422	0/1:15,4:20:8.71:9,0,208	0/1:20,1:21:5.94:6,0,295	1/1:23,0:22:13.43:80,13,0	0/0:11,0:10:17.97:0,18,199
chr10	89621743	.	AGAGAGAGAGAGC	A	6701.28	PASS	AB=0.989;AC=23;AF=0.411;AN=56;BaseQRankSum=3.740;DP=548;FS=13.605;HRun=0;HaplotypeScore=192.1817;InbreedingCoeff=0.5512;MQ=59.40;MQ0=5;MQRankSum=-7.219;QD=25.77;ReadPosRankSum=0.100;VQSLOD=3.2160;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:2.98:0,3,122	0/1:11,0:11:23.33:23,0,386	0/0:20,0:10:23.08:0,23,369	0/0:20,0:10:25.74:0,26,310	1/1:11,1:12:14.98:336,15,0	0/1:21,0:21:89.20:89,0,555	0/1:18,0:18:18.76:19,0,697	1/1:25,0:25:6.83:406,7,0	1/1:19,0:19:8.89:778,9,0	0/0:22,0:21:63.01:0,63,1805	0/0:23,0:23:46.28:0,46,1068	1/1:22,2:24:47.58:1058,48,0	0/0:16,0:16:31.92:0,32,840	1/1:8,0:8:17.93:426,18,0	0/0:21,0:21:18.17:0,18,952	0/0:18,0:18:45.08:0,45,1561	0/1:28,0:29:76.50:76,0,1266	0/1:16,1:17:26.67:627,0,27	1/1:14,0:14:17.60:316,18,0	1/1:27,0:27:63.51:1172,64,0	0/0:18,0:18:2.30:0,2,357	1/1:20,0:20:30.74:484,31,0	0/0:16,0:15:42.07:0,42,1196	0/0:28,0:28:69.17:0,69,2737	0/0:23,0:23:49.68:0,50,1632	0/0:21,0:21:61.93:0,62,1888	1/1:14,1:14:13.06:890,13,0	0/0:17,0:16:48.03:0,48,1476
chr10	89621745	.	AGAGAGAGAGC	A	5748.23	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=3.503;DP=535;FS=19.059;HRun=0;HaplotypeScore=172.0187;InbreedingCoeff=0.5204;MQ=60.87;MQ0=5;MQRankSum=-4.647;QD=19.89;ReadPosRankSum=0.305;VQSLOD=2.9341;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:2.86:0,3,111	0/1:11,0:11:28.53:29,0,323	0/0:21,0:11:26.08:0,26,332	0/0:20,0:10:25.72:0,26,257	1/1:9,3:12:14.98:243,15,0	0/1:24,0:24:99:180,0,440	0/1:17,0:17:18.77:19,0,528	1/1:24,0:24:31.74:474,32,0	1/1:12,5:17:32.29:638,32,0	0/0:22,0:21:63.01:0,63,1509	0/0:22,0:22:46.28:0,46,868	1/1:19,4:23:55.10:883,55,0	0/0:16,0:16:31.92:0,32,720	1/1:4,3:7:20.95:342,21,0	0/1:22,0:22:10.26:10,0,661	0/0:16,0:16:39.09:0,39,1302	0/1:28,0:28:99:101,0,991	1/1:13,3:16:2.06:532,2,0	1/1:12,1:13:27.67:295,28,0	1/1:18,7:25:63.74:851,64,0	0/1:18,0:18:54.66:55,0,160	1/1:15,3:18:33.91:382,34,0	0/0:15,0:14:39.06:0,39,984	0/0:28,0:28:69.10:0,69,2283	0/0:23,0:23:49.68:0,50,1399	0/0:20,0:20:58.58:0,59,1562	1/1:9,5:13:30.38:715,30,0	0/0:17,0:16:48.03:0,48,1198
chr10	89621753	.	AGC	A	4988.88	PASS	AB=0.992;AC=29;AF=0.518;AN=56;BaseQRankSum=1.618;DP=547;FS=0.404;HRun=0;HaplotypeScore=105.5634;InbreedingCoeff=0.7065;MQ=68.10;MQ0=4;MQRankSum=-4.415;QD=15.21;ReadPosRankSum=1.142;VQSLOD=4.8902;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:0:0,0,0	0/1:11,0:11:12.09:98,0,12	0/0:26,0:16:37.82:0,38,324	0/0:22,0:12:28.64:0,29,203	1/1:4,12:16:10.02:58,10,0	0/1:22,1:23:26.49:270,0,26	1/1:17,0:17:6.54:201,7,0	1/1:24,0:24:65.95:602,66,0	1/1:18,2:20:44.07:391,44,0	0/0:23,0:22:31.13:0,31,425	0/0:14,0:14:30.31:0,30,256	1/1:22,2:24:58.26:523,58,0	0/0:17,0:17:34.84:0,35,328	1/1:11,0:11:16.73:236,17,0	0/1:21,0:21:0.28:205,0,0	0/0:19,0:19:20.79:0,21,336	0/1:30,0:30:32.73:318,0,33	1/1:15,1:16:44.19:349,44,0	1/1:14,0:14:38.89:345,39,0	1/1:23,2:25:46.42:423,46,0	1/1:16,0:16:32.89:276,33,0	1/1:17,1:18:47.66:353,48,0	0/0:14,0:14:33.37:0,33,341	0/0:26,0:26:50.76:0,51,585	0/0:22,0:22:37.55:0,38,457	0/0:19,0:19:33.63:0,34,544	1/1:13,0:13:38.37:340,38,0	0/0:17,0:16:35.73:0,36,350
chr10	89621755	.	C	CGA	278.56	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-0.131;DP=515;FS=3.000;HRun=0;HaplotypeScore=120.4199;InbreedingCoeff=0.1947;MQ=71.73;MQ0=4;MQRankSum=1.730;QD=1.61;ReadPosRankSum=-1.922;VQSLOD=2.1560;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:0,28:30:0:0,0,0	0/1:10,0:10:0.15:0,0,14	0/0:26,0:16:44.69:0,45,578	0/0:24,0:14:30.41:0,30,357	0/0:16,0:16:7.71:0,8,34	0/0:19,0:19:3.87:0,4,27	0/1:18,0:18:10.88:39,0,11	0/1:24,0:24:1.71:23,0,2	0/1:20,0:20:1.44:1,0,138	0/0:20,0:19:51.10:0,51,721	0/0:12,0:12:33.10:0,33,452	0/1:24,0:24:9.62:10,0,137	0/0:14,0:14:35.98:0,36,470	0/1:11,0:11:44.87:66,0,45	1/1:16,0:16:13.43:151,13,0	0/0:15,0:15:36.11:0,36,510	0/1:24,0:24:33.61:53,0,34	0/0:16,0:16:17.51:0,18,92	0/1:13,0:13:5.44:68,0,5	0/0:25,0:25:16.59:0,17,147	0/1:13,0:13:0.07:0,0,0	0/0:18,0:18:4.73:0,5,24	0/0:14,0:14:30.08:0,30,435	0/0:22,0:22:51.14:0,51,700	0/0:23,0:23:48.97:0,49,629	0/0:20,0:20:50.79:0,51,674	0/0:14,0:14:13.12:0,13,85	0/0:14,0:13:36.12:0,36,516
chr10	89623176	.	AGTC	A	199.75	PASS	AB=1.000;AC=19;AF=0.452;AN=42;BaseQRankSum=7.347;DP=307;FS=45.780;HRun=0;HaplotypeScore=66.1875;InbreedingCoeff=0.7400;MQ=71.25;MQ0=28;MQRankSum=-7.605;QD=5.87;ReadPosRankSum=-2.099;VQSLOD=0.0439;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:3.01:36,3,0	1/1:1,4:5:14.97:129,15,0	0/0:18,0:11:32.51:0,33,485	0/0:20,0:13:38.45:0,38,586	1/1:4,0:2:3.22:13,3,0	./.	./.	1/1:1,0:1:2.04:6,2,0	./.	0/0:26,0:25:71.24:0,71,1042	0/0:9,0:9:27.09:0,27,433	./.	0/0:23,0:23:62.06:0,62,837	1/1:2,0:1:2.22:7,2,0	./.	0/0:22,0:22:47.35:0,47,740	1/1:2,2:2:5.68:41,6,0	0/1:1,0:1:0:0,0,0	./.	1/1:10,0:10:22.40:96,22,0	1/1:1,0:1:2.04:6,2,0	./.	0/0:17,0:17:43.68:0,44,644	0/0:49,0:43:99:0,117,1662	0/0:19,0:18:54.13:0,54,763	0/0:33,0:30:81.79:0,82,1421	1/1:3,0:2:2.74:12,3,0	0/0:30,0:23:49.96:0,50,747
chr10	89623185	.	C	CTG	1058.43	PASS	AC=20;AF=0.476;AN=42;BaseQRankSum=6.562;DP=301;FS=53.375;HRun=0;HaplotypeScore=64.2222;InbreedingCoeff=0.7346;MQ=82.18;MQ0=4;MQRankSum=-7.615;QD=36.50;ReadPosRankSum=-4.021;VQSLOD=0.6542;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:2:3.01:56,3,0	1/1:1,4:5:15.05:225,15,0	0/0:22,0:16:48.14:0,48,699	0/0:27,0:21:60.13:0,60,862	1/1:0,2:1:3.01:61,3,0	./.	./.	1/1:1,1:2:3.01:61,3,0	./.	0/0:28,0:28:78.26:0,78,1247	0/0:12,0:12:30.10:0,30,489	./.	0/0:26,0:26:75.26:0,75,1210	1/1:0,1:1:3.01:61,3,0	./.	0/0:18,0:18:45.15:0,45,734	1/1:0,2:2:3.01:52,3,0	1/1:0,1:1:3.01:60,3,0	./.	1/1:1,10:10:27.04:520,27,0	1/1:0,1:1:3.01:61,3,0	./.	0/0:18,0:18:48.16:0,48,765	0/0:47,0:46:99:0,120,1948	0/0:21,0:21:63.22:0,63,1027	0/0:30,0:29:87.30:0,87,1405	1/1:0,2:1:3.01:61,3,0	0/0:22,0:21:57.17:0,57,902
chr10	89623262	.	TGC	T	684.16	PASS	AB=0.510;AC=16;AF=0.364;AN=44;BaseQRankSum=6.340;DP=412;FS=24.364;HRun=0;HaplotypeScore=82.3402;InbreedingCoeff=0.7520;MQ=54.64;MQ0=22;MQRankSum=-5.688;QD=10.21;ReadPosRankSum=-0.344;VQSLOD=0.9896;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:0,9:9:0.47:0,0,1	./.	0/0:28,0:14:37.22:0,37,550	0/0:31,0:18:26.54:0,27,628	0/1:0,4:4:0:1,0,0	./.	./.	1/1:14,4:6:9.03:146,9,0	./.	0/0:43,0:41:99:0,123,2317	0/0:23,0:23:57.20:0,57,1115	./.	0/0:28,0:28:68.90:0,69,1245	0/1:0,3:3:0.02:0,0,0	0/1:1,6:6:0.01:0,0,0	0/0:35,0:35:87.17:0,87,1664	1/1:0,6:6:6.02:96,6,0	1/1:0,5:5:15.05:244,15,0	1/1:0,3:3:9.03:146,9,0	0/1:0,3:3:0.02:0,0,0	1/1:1,14:14:6:97,6,0	./.	0/0:24,0:24:63.17:0,63,1167	0/0:30,0:30:75.22:0,75,1357	0/0:29,1:30:65.82:0,66,1459	0/0:36,0:34:99:0,102,1992	1/1:0,3:3:6:98,6,0	0/0:18,0:18:54.19:0,54,1033
chr10	89624174	.	T	TC	17880.20	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-14.589;DP=678;FS=10.146;HRun=1;HaplotypeScore=63.6351;InbreedingCoeff=0.9956;MQ=88.38;MQ0=0;MQRankSum=-5.085;QD=40.92;ReadPosRankSum=2.183;VQSLOD=4.9743;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,46:47:99:1843,123,0	1/1:0,4:4:12.04:180,12,0	0/0:20,0:20:50.75:0,51,634	0/0:29,0:29:72.11:0,72,900	1/1:0,21:21:57.19:853,57,0	1/1:0,21:21:57.19:854,57,0	1/1:1,30:31:87.29:1304,87,0	1/1:3,26:29:78.26:1167,78,0	1/1:1,20:21:51.17:764,51,0	0/0:23,0:23:69.21:0,69,882	0/0:14,0:14:39.13:0,39,505	1/1:0,25:25:72.24:1079,72,0	0/0:33,1:34:51.06:0,51,1104	1/1:0,17:17:48.16:719,48,0	1/1:1,25:26:72.24:1079,72,0	0/0:16,0:16:48.16:0,48,622	1/1:1,31:32:87.29:1304,87,0	1/1:0,18:18:54.18:809,54,0	1/1:3,26:29:78.25:1147,78,0	1/1:0,21:21:57.15:829,57,0	1/1:2,52:54:99:2245,151,0	1/1:0,24:24:69.23:1034,69,0	0/0:17,0:17:51.15:0,51,648	0/0:33,0:33:99:0,99,1268	0/0:18,0:18:54.18:0,54,701	0/0:24,0:24:66.21:0,66,855	1/1:1,16:16:45.14:668,45,0	0/0:13,0:13:36.12:0,36,467
chr10	89624630	.	C	CT	20430.92	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-16.890;DP=691;FS=13.684;HRun=0;HaplotypeScore=62.8479;InbreedingCoeff=0.9976;MQ=80.81;MQ0=0;MQRankSum=-2.168;QD=43.94;ReadPosRankSum=1.974;VQSLOD=4.1306;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,48:48:99:2206,138,0	1/1:0,6:6:15.05:240,15,0	0/0:18,0:18:51.16:0,51,670	0/0:21,0:22:52.14:0,52,788	1/1:0,25:25:69.24:1103,69,0	1/1:1,22:23:57.19:911,57,0	1/1:0,33:33:93.32:1487,93,0	1/1:0,23:23:69.24:1101,69,0	1/1:0,24:24:69.23:1092,69,0	0/0:26,0:26:78.26:0,78,1090	0/0:11,0:11:30.10:0,30,419	1/1:1,32:33:90.31:1439,90,0	0/0:14,0:14:42.14:0,42,582	1/1:0,17:17:45.15:719,45,0	1/1:0,31:31:84.29:1342,84,0	0/0:23,0:23:69.22:0,69,946	1/1:0,32:32:87.30:1391,87,0	1/1:1,26:27:66.23:1055,66,0	1/1:1,20:21:63.19:962,63,0	1/1:1,20:21:54.13:831,54,0	1/1:1,44:45:99:1966,123,0	1/1:0,29:29:87.30:1390,87,0	0/0:21,0:21:63.17:0,63,857	0/0:24,0:24:72.20:0,72,984	0/0:29,0:29:87.29:0,87,1214	0/0:27,0:27:81.27:0,81,1125	1/1:0,27:27:75.26:1197,75,0	0/0:11,0:11:30.10:0,30,419
chr10	89624944	.	T	TC	8337	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-7.897;DP=611;FS=6.043;HRun=7;HaplotypeScore=63.0288;InbreedingCoeff=0.9990;MQ=75.97;MQ0=0;MQRankSum=-2.720;QD=23.89;ReadPosRankSum=1.615;VQSLOD=5.4027;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,30:34:72.22:870,72,0	1/1:3,0:10:20.13:102,20,0	0/0:21,0:21:54.05:0,54,505	0/0:19,0:18:40.63:0,41,340	1/1:3,19:22:54.17:650,54,0	1/1:1,17:19:45.12:531,45,0	1/1:0,18:18:36.11:435,36,0	1/1:11,26:37:78.15:898,78,0	1/1:1,15:16:34.95:498,35,0	0/0:33,0:33:84.12:0,84,811	0/0:20,0:20:51.06:0,51,488	1/1:2,16:18:36.11:435,36,0	0/0:29,0:29:78.11:0,78,753	1/1:2,18:20:48.15:580,48,0	1/1:0,0:20:51.75:263,52,0	0/0:16,0:16:45.04:0,45,423	1/1:3,0:34:74.75:380,75,0	1/1:4,16:20:39.12:471,39,0	1/1:2,18:20:54.09:610,54,0	1/1:2,13:15:39.08:455,39,0	1/1:3,16:19:37.67:439,38,0	1/1:1,11:12:27.08:326,27,0	0/0:19,0:19:54.08:0,54,521	0/0:14,0:14:42.06:0,42,401	0/0:35,0:35:96.09:0,96,915	0/0:39,0:39:99:0,105,1008	1/1:0,14:15:33.57:396,34,0	0/0:17,0:17:48.08:0,48,464
chr10	89625397	.	T	TCAGCCTGCTTA	47425.26	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=1.248;DP=698;FS=0.309;HRun=0;HaplotypeScore=223.6324;InbreedingCoeff=0.9973;MQ=82.76;MQ0=0;MQRankSum=-19.315;QD=104.92;ReadPosRankSum=-2.593;VQSLOD=4.3616;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,15:46:99:4027,108,0	1/1:4,5:9:24.08:1256,24,0	0/0:32,0:31:63.72:0,64,2370	0/0:25,0:25:53.97:0,54,1551	1/1:12,8:20:32.88:1051,33,0	1/1:12,12:26:69.23:2555,69,0	1/1:23,7:31:78.27:3664,78,0	1/1:29,3:32:87.30:4199,87,0	1/1:13,13:26:69.24:3269,69,0	0/0:24,0:24:69.22:0,69,2186	0/0:19,0:19:48.15:0,48,1569	1/1:12,18:32:78.27:4015,78,0	0/0:17,0:17:48.16:0,48,1664	1/1:11,13:28:72.21:3509,72,0	1/1:9,20:31:78.27:3813,78,0	0/0:26,0:26:66.23:0,66,2281	1/1:14,5:21:33.11:1376,33,0	1/1:16,11:28:72.25:3707,72,0	1/1:10,5:19:51.15:2035,51,0	1/1:12,9:23:45.15:1703,45,0	1/1:16,7:31:44.70:1535,45,0	1/1:12,8:21:54.18:1777,54,0	0/0:18,0:18:45.15:0,45,1521	0/0:39,0:39:99:0,105,3484	0/0:12,0:12:33.11:0,33,1064	0/0:28,0:28:78.25:0,78,2387	1/1:12,15:27:78.23:3933,78,0	0/0:6,0:6:15.05:0,15,465
chr10	89626373	.	ACAC	A	819	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.612;DP=684;FS=6.122;HRun=0;HaplotypeScore=99.8092;InbreedingCoeff=0.8661;MQ=57.98;MQ0=45;MQRankSum=0.093;QD=11.07;ReadPosRankSum=0.015;VQSLOD=2.9216;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,18:20:18.06:300,18,0	0/0:9,0:8:8.12:0,8,62	0/0:49,0:12:27.07:0,27,312	0/0:41,0:15:36.09:0,36,420	0/0:19,0:19:51.13:0,51,742	1/1:4,14:16:15.05:228,15,0	1/1:6,25:27:27.03:429,27,0	0/0:20,0:19:51.62:0,52,683	0/0:27,0:27:21.84:0,22,631	0/0:18,0:18:48.15:0,48,698	0/0:14,0:14:35.81:0,36,503	0/0:23,0:23:44.98:0,45,581	0/0:17,0:17:39.03:0,39,665	0/0:21,0:21:42.10:0,42,640	0/0:23,0:16:6.38:0,6,53	0/0:27,0:27:71.38:0,71,1185	0/0:31,0:27:8.95:0,9,67	0/0:23,0:22:57.17:0,57,836	0/0:19,0:19:38.59:0,39,723	0/0:16,0:16:39.04:0,39,526	0/0:54,0:53:99:0,105,1401	0/0:13,0:13:30.10:0,30,481	0/0:20,0:20:57.16:0,57,859	0/0:43,0:42:99:0,111,2108	0/0:17,0:17:51.03:0,51,757	0/0:35,0:35:89.51:0,90,1560	0/0:15,0:15:36.48:0,36,527	0/0:16,0:14:3.73:0,4,543
chr10	89626376	.	C	CCA	1610.81	PASS	AB=0.844;AC=22;AF=0.423;AN=52;BaseQRankSum=-3.892;DP=706;FS=0.642;HRun=0;HaplotypeScore=100.5866;InbreedingCoeff=-0.0148;MQ=54.38;MQ0=46;MQRankSum=-1.025;QD=4.23;ReadPosRankSum=-1.130;VQSLOD=2.4846;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:16.26:0,16,73	1/1:2,0:9:1.14:23,1,0	./.	./.	0/1:14,6:21:47.42:151,0,47	0/0:17,0:17:13.82:0,14,63	0/0:28,0:27:24.69:0,25,109	1/1:19,0:18:3.01:39,3,0	1/1:17,8:26:9.03:124,9,0	0/0:19,0:19:8.56:0,9,91	0/1:13,0:15:35.42:35,0,38	0/1:14,8:22:14.68:205,0,15	0/0:18,0:18:20.83:0,21,219	0/1:17,4:21:74.44:74,0,83	1/1:1,0:21:3.67:48,4,0	0/0:22,0:24:41.59:0,42,393	1/1:3,0:33:9.38:62,9,0	0/1:17,7:23:7.86:236,0,8	0/1:21,1:22:25.16:42,0,25	0/1:10,6:16:23.12:80,0,23	0/1:36,14:51:11.61:289,0,12	0/1:11,6:17:20.70:122,0,21	0/1:18,1:19:29.70:30,0,116	0/0:41,0:42:65.66:0,66,637	0/0:18,0:18:15.97:0,16,157	0/0:33,0:37:53.33:0,53,459	0/1:13,2:15:5.04:208,0,5	0/1:16,0:15:4.17:4,0,95
chr10	89626510	.	C	CAAAACAAAAC	11474.80	PASS	AB=0.769;AC=22;AF=0.393;AN=56;BaseQRankSum=11.774;DP=757;FS=21.965;HRun=0;HaplotypeScore=274.2036;InbreedingCoeff=0.8579;MQ=66.22;MQ0=0;MQRankSum=-12.368;QD=36.78;ReadPosRankSum=-5.352;VQSLOD=2.1232;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:35:73.50:0,74,1227	0/0:6,0:6:12.03:0,12,300	0/0:39,0:37:45.14:0,45,1113	0/0:27,0:25:1.20:0,1,679	1/1:24,0:41:64.61:1900,65,0	0/0:34,0:34:66.14:0,66,1857	0/0:28,0:28:35.17:0,35,911	1/1:14,0:30:25.89:752,26,0	1/1:13,0:28:36.10:1228,36,0	0/0:36,0:36:87.03:0,87,2487	0/0:23,0:23:48.13:0,48,1319	1/1:14,0:20:33.09:1205,33,0	0/0:14,0:14:29.99:0,30,699	1/1:14,0:23:27.09:1058,27,0	0/0:29,0:29:63.13:0,63,1685	0/1:28,0:28:53.42:53,0,1783	0/0:32,0:31:54.12:0,54,1451	1/1:8,0:15:15.05:515,15,0	1/1:24,0:35:58.73:1873,59,0	1/1:10,1:26:24.06:987,24,0	0/1:2,0:14:0:2,0,0	1/1:9,0:20:21.07:823,21,0	0/0:15,0:15:31.78:0,32,913	0/0:47,0:47:99:0,108,3137	0/0:22,0:22:54.19:0,54,1611	0/0:36,0:36:75.26:0,75,2266	1/1:15,0:28:30.10:1078,30,0	0/0:22,0:22:51.15:0,51,1464
chr10	89627759	.	T	TTTC	989.01	PASS	AB=0.927;AC=9;AF=0.161;AN=56;BaseQRankSum=8.923;DP=589;FS=29.309;HRun=0;HaplotypeScore=150.6146;InbreedingCoeff=0.0304;MQ=63.62;MQ0=4;MQRankSum=-6.848;QD=6.42;ReadPosRankSum=-3.778;VQSLOD=0.7608;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1853	0/0:1,0:1:3.01:0,3,42	0/0:39,0:29:49.94:0,50,824	0/0:59,0:27:31.90:0,32,608	1/1:4,1:5:9.02:135,9,0	0/0:21,0:21:57.19:0,57,962	0/0:24,0:24:66.21:0,66,1063	0/1:27,0:27:20.63:21,0,778	0/1:24,0:24:32.45:32,0,924	0/0:19,0:18:48.16:0,48,805	0/0:11,0:11:33.10:0,33,537	0/1:19,2:21:99:228,0,706	0/0:22,0:22:56.71:0,57,911	0/1:28,3:31:99:265,0,1147	0/0:18,0:18:51.17:0,51,845	0/0:19,0:19:48.15:0,48,773	0/0:19,0:19:36.11:0,36,541	0/1:12,1:13:92.81:93,0,454	0/0:12,0:10:21.07:0,21,339	0/0:6,0:6:15.05:0,15,254	0/0:13,0:13:30.09:0,30,463	0/1:15,2:17:99:119,0,543	0/0:11,0:11:18.06:0,18,307	0/0:58,0:58:99:0,154,2539	0/0:8,0:8:18.06:0,18,288	0/0:29,0:28:78.26:0,78,1256	0/1:13,3:16:99:238,0,386	0/0:7,0:7:21.07:0,21,358
chr10	89627822	.	TTGG	T	636.37	PASS	AB=0.806;AC=8;AF=0.148;AN=54;BaseQRankSum=6.742;DP=398;FS=31.918;HRun=0;HaplotypeScore=120.5170;InbreedingCoeff=-0.0084;MQ=68.67;MQ0=0;MQRankSum=-5.259;QD=9.09;ReadPosRankSum=-1.963;VQSLOD=1.2490;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:45.43:0,45,1175	0/0:4,0:4:12.04:0,12,290	0/0:24,0:19:57.20:0,57,1287	0/0:16,0:15:42.14:0,42,1035	0/0:5,0:5:15.05:0,15,370	0/0:18,0:18:54.15:0,54,1252	0/0:24,0:24:72.20:0,72,1720	0/0:15,0:15:42.14:0,42,874	0/1:7,2:9:83.03:83,0,479	0/0:23,0:23:66.23:0,66,1577	0/0:11,0:11:33.11:0,33,787	0/1:10,6:16:99:281,0,544	0/0:12,0:12:30.01:0,30,686	0/1:9,4:13:99:184,0,495	0/0:14,0:14:39.13:0,39,961	0/0:19,0:19:54.19:0,54,1325	0/0:8,0:8:21.07:0,21,517	0/1:2,1:4:45.41:45,0,139	0/1:12,1:13:18.57:19,0,782	./.	1/1:2,1:3:1.55:4,2,0	0/0:8,0:8:24.08:0,24,584	0/0:9,0:9:27.09:0,27,667	0/0:43,0:43:99:0,123,2821	0/0:11,0:11:30.10:0,30,740	0/0:32,0:31:90.27:0,90,2104	0/1:9,3:12:99:146,0,524	0/0:9,0:9:27.09:0,27,653
chr10	89627831	.	C	CTTATCATCG	6066.87	PASS	AB=0.786;AC=17;AF=0.327;AN=52;BaseQRankSum=3.765;DP=379;FS=67.662;HRun=0;HaplotypeScore=159.4982;InbreedingCoeff=0.8773;MQ=69.51;MQ0=2;MQRankSum=-8.719;QD=67.41;ReadPosRankSum=-1.587;VQSLOD=2.0404;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:48.16:0,48,1436	0/0:5,0:5:15:0,15,383	0/0:22,0:18:44.27:0,44,1171	0/0:21,0:16:29.25:0,29,849	1/1:4,2:6:12.04:445,12,0	0/0:16,0:16:48.11:0,48,1280	0/0:23,0:23:66.21:0,66,1931	1/1:4,5:12:24.08:1063,24,0	1/1:4,4:8:18.06:863,18,0	0/0:22,0:22:63.20:0,63,1745	0/0:12,0:12:33.10:0,33,913	1/1:14,2:16:18.11:590,18,0	0/0:11,0:11:27.09:0,27,799	1/1:7,4:11:21.07:910,21,0	0/0:13,0:13:33.11:0,33,960	0/0:17,0:17:45.07:0,45,1337	0/0:8,0:8:18.03:0,18,441	1/1:3,0:3:6.02:144,6,0	1/1:10,2:12:24.02:602,24,0	./.	./.	1/1:4,4:11:15.05:719,15,0	0/0:9,0:9:24.08:0,24,727	0/0:37,0:37:92.79:0,93,2610	0/0:10,0:10:30.09:0,30,804	0/0:29,0:29:75.24:0,75,2139	0/1:7,3:11:39.15:732,0,39	0/0:9,0:9:27.09:0,27,817
chr10	89627861	.	CTCT	C	405.58	PASS	AB=0.954;AC=11;AF=0.239;AN=46;BaseQRankSum=6.975;DP=427;FS=26.327;HRun=0;HaplotypeScore=86.6292;InbreedingCoeff=-0.0864;MQ=37.87;MQ0=61;MQRankSum=-7.011;QD=2.10;ReadPosRankSum=-2.835;VQSLOD=-0.4269;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:16:29.72:0,30,433	0/1:7,0:7:2.01:2,0,157	0/0:12,0:3:9.01:0,9,87	0/0:12,0:4:8.94:0,9,76	0/0:6,0:4:0:0,0,0	0/0:23,0:19:11.35:0,11,296	0/0:40,0:29:59.48:0,59,605	0/0:12,0:1:3.01:0,3,53	./.	0/1:37,1:31:23.58:24,0,683	0/1:18,0:14:2.89:3,0,256	0/1:9,0:5:11.95:12,0,62	0/0:14,0:13:17.74:0,18,175	0/0:6,0:2:2.80:0,3,13	0/0:12,0:9:17.90:0,18,215	0/0:19,0:16:41.92:0,42,567	0/0:12,0:9:5.42:0,5,98	./.	./.	./.	./.	1/1:10,0:9:8.83:54,9,0	0/1:29,2:25:43.05:43,0,381	0/0:31,0:25:47.81:0,48,873	0/1:18,1:14:23.26:23,0,262	0/1:31,11:36:99:312,0,833	0/1:6,0:5:15.10:45,0,15	0/1:12,1:12:15.70:16,0,445
chr10	89627888	.	CTCT	C	450.83	PASS	AB=0.989;AC=14;AF=0.333;AN=42;BaseQRankSum=5.148;DP=384;FS=42.044;HRun=0;HaplotypeScore=80.7196;InbreedingCoeff=-0.3349;MQ=29.92;MQ0=81;MQRankSum=-6.361;QD=1.77;ReadPosRankSum=0.240;VQSLOD=-0.1124;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:9:9.56:10,0,201	0/1:11,0:11:51.72:52,0,127	./.	./.	0/0:4,0:3:0:0,0,0	0/1:19,0:14:51.69:52,0,67	0/1:29,1:18:63.60:64,0,118	0/0:19,0:1:3.01:0,3,45	./.	0/1:36,0:27:75.52:76,0,486	0/1:17,1:13:20.54:21,0,259	0/0:10,0:5:5.95:0,6,86	0/0:10,0:8:8.05:0,8,125	0/0:7,0:2:0.39:0,0,1	0/0:10,0:5:10.25:0,10,124	0/0:20,0:15:17.16:0,17,482	0/1:12,0:7:7.60:8,0,20	./.	./.	1/1:3,0:1:2.80:13,3,0	./.	./.	0/1:28,0:20:24.69:25,0,327	0/0:22,1:19:24.40:0,24,749	0/1:17,1:13:31.57:32,0,141	0/1:46,0:38:99:212,0,615	0/1:9,0:4:5.55:6,0,25	0/1:13,0:10:6.48:6,0,304
chr10	89627897	.	CTCT	C	185.25	PASS	AB=0.955;AC=13;AF=0.325;AN=40;BaseQRankSum=3.168;DP=347;FS=20.863;HRun=0;HaplotypeScore=78.9676;InbreedingCoeff=-0.0530;MQ=29.13;MQ0=70;MQRankSum=-2.743;QD=1.13;ReadPosRankSum=-1.166;VQSLOD=0.0482;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:7:26.87:48,0,27	0/1:7,3:10:56.56:116,0,57	./.	./.	./.	0/0:16,1:12:4.95:0,5,218	0/0:27,0:16:10.63:0,11,265	0/0:18,0:1:3.01:0,3,31	./.	0/1:31,2:25:12.94:13,0,575	0/0:16,1:13:0.54:0,1,267	0/0:10,0:5:6.02:0,6,96	0/0:10,0:8:14.83:0,15,209	1/1:3,0:1:1.25:3,1,0	0/1:10,0:5:13.09:13,0,81	0/0:19,0:14:21.27:0,21,465	1/1:10,0:6:7.80:54,8,0	./.	./.	1/1:3,0:1:2.92:17,3,0	./.	./.	0/1:27,0:19:8.22:8,0,382	0/0:23,1:19:28.32:0,28,670	0/1:19,0:14:15.56:16,0,160	0/1:39,1:35:21.08:21,0,844	0/0:8,0:3:1.24:0,1,16	0/0:11,0:9:20.92:0,21,326
chr10	89627912	.	C	CTCT	376.55	PASS	AB=0.911;AC=10;AF=0.313;AN=32;BaseQRankSum=3.916;DP=275;FS=12.324;HRun=0;HaplotypeScore=74.5615;InbreedingCoeff=-0.1635;MQ=27.79;MQ0=51;MQRankSum=-1.123;QD=2.81;ReadPosRankSum=0.789;VQSLOD=0.6597;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:3:5.58:0,6,26	1/1:6,0:6:1.30:17,1,0	./.	./.	./.	1/1:15,0:11:0.36:85,0,0	0/0:20,0:12:4.63:0,5,20	./.	./.	0/1:27,2:20:50.34:50,0,390	0/0:13,0:10:4.39:0,4,145	0/0:9,0:5:3.01:0,3,47	0/1:8,0:7:22.41:22,0,64	./.	./.	0/1:11,2:11:99:106,0,202	0/0:9,0:5:3.85:0,4,11	./.	./.	0/0:3,0:1:0:0,0,0	./.	./.	0/0:24,0:18:20.85:0,21,275	0/0:19,0:15:16.40:0,16,214	0/1:13,5:13:20.83:69,0,21	0/1:34,1:30:81.32:81,0,439	./.	0/1:9,1:8:51.60:52,0,159
chr10	89628012	.	T	TCC	75.28	PASS	AB=0.600;AC=1;AF=0.018;AN=56;BaseQRankSum=2.425;DP=285;FS=13.344;HRun=0;HaplotypeScore=55.3469;InbreedingCoeff=-0.0429;MQ=59.77;MQ0=3;MQRankSum=0.081;QD=12.55;ReadPosRankSum=-2.453;VQSLOD=1.5955;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:48.15:0,48,736	0/0:1,0:1:3.01:0,3,49	0/0:12,0:5:24.07:0,24,370	0/0:24,0:13:37.34:0,37,529	0/0:6,0:6:15.05:0,15,244	0/0:6,0:6:12.04:0,12,195	0/0:19,0:18:51.17:0,51,820	0/0:27,0:21:63.20:0,63,1002	0/0:9,0:9:24.08:0,24,391	0/0:9,0:9:27.09:0,27,439	0/0:6,0:6:9.03:0,9,147	0/0:7,0:7:21.07:0,21,342	0/0:6,0:6:15.05:0,15,244	0/0:5,0:5:12.04:0,12,195	0/0:10,0:10:26.57:0,27,387	0/0:9,0:9:27.09:0,27,428	0/0:13,0:13:27.09:0,27,429	0/0:14,0:14:39.13:0,39,636	0/0:7,0:7:18.06:0,18,291	0/0:6,0:6:18.06:0,18,293	0/0:15,0:15:30.09:0,30,465	0/0:2,0:2:6.02:0,6,98	0/0:8,0:8:15.05:0,15,244	0/0:13,0:13:30.10:0,30,489	0/0:7,0:7:12.04:0,12,195	0/0:12,0:12:30.92:0,31,429	0/0:2,0:2:3.01:0,3,49	0/1:2,4:6:82.66:149,0,83
chr10	89628238	.	C	CT	435.47	PASS	AB=0.892;AC=24;AF=0.429;AN=56;BaseQRankSum=-1.282;DP=209;FS=1.580;HRun=0;HaplotypeScore=27.0659;InbreedingCoeff=0.3063;MQ=53.32;MQ0=24;MQRankSum=0.427;QD=3.96;ReadPosRankSum=-0.964;VQSLOD=2.8818;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,3:13:5.24:119,5,0	1/1:2,0:2:5.82:32,6,0	0/1:14,0:6:4.18:4,0,61	0/0:9,0:2:0:0,0,0	1/1:3,0:2:0.89:2,1,0	1/1:3,2:5:11.86:116,12,0	1/1:11,1:11:17.81:131,18,0	1/1:8,0:5:1.25:3,1,0	0/1:5,1:4:4.90:5,0,14	0/0:3,1:4:2.68:0,3,11	0/0:6,1:4:0:0,0,0	0/0:5,0:4:2.63:0,3,11	0/0:5,1:5:5.75:0,6,39	0/0:8,1:8:0.80:0,1,8	1/1:9,1:9:11.20:80,11,0	0/0:5,0:3:2.80:0,3,13	0/1:9,1:7:48.20:59,0,48	1/1:3,0:5:2.51:7,3,0	0/0:2,0:3:2.71:0,3,20	1/1:5,0:4:0.47:1,0,0	0/0:9,0:6:8.09:0,8,41	0/0:5,0:3:3.14:0,3,19	0/1:6,2:7:9.70:10,0,13	0/0:12,0:10:17.96:0,18,150	0/0:2,1:2:0:0,0,0	0/0:9,2:6:3.26:0,3,22	0/0:8,0:5:0.81:0,1,2	1/1:5,0:3:1.72:5,2,0
chr10	89628239	.	CCT	C	1038.76	PASS	AB=0.961;AC=41;AF=0.788;AN=52;BaseQRankSum=-2.552;DP=201;FS=0.000;HRun=0;HaplotypeScore=24.3621;InbreedingCoeff=0.1617;MQ=54.70;MQ0=17;MQRankSum=-0.036;QD=6.00;ReadPosRankSum=0.391;VQSLOD=2.0080;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,5:14:10.93:244,11,0	1/1:2,0:2:6.02:86,6,0	0/0:13,0:6:5.03:0,5,108	0/1:9,0:2:0:0,0,0	0/1:4,0:3:0:0,0,0	1/1:3,2:5:11.31:89,11,0	1/1:5,8:11:17.80:241,18,0	1/1:8,0:5:0.47:1,0,0	0/1:6,0:4:8.66:14,0,9	1/1:5,0:5:5.50:37,5,0	1/1:7,0:4:3:26,3,0	1/1:5,0:4:2.50:9,2,0	1/1:6,0:5:3.84:13,4,0	1/1:9,0:8:4.51:22,5,0	1/1:8,1:8:8.34:68,8,0	1/1:6,0:4:2.50:9,2,0	0/1:5,3:7:20.65:98,0,21	1/1:6,0:5:5.88:37,6,0	1/1:5,0:3:8.86:63,9,0	./.	1/1:9,0:6:2.84:9,3,0	0/1:5,0:3:5.31:11,0,5	0/0:7,0:6:0.94:0,1,2	0/1:12,0:10:10.96:11,0,23	./.	1/1:9,0:5:5.19:34,5,0	1/1:6,0:4:5.54:29,6,0	0/1:5,0:3:0:0,0,0
chr10	89628240	.	CT	C	927.61	PASS	AB=1.000;AC=47;AF=0.870;AN=54;BaseQRankSum=-3.399;DP=199;FS=1.658;HRun=1;HaplotypeScore=24.2824;InbreedingCoeff=0.2005;MQ=55.43;MQ0=16;MQRankSum=-1.050;QD=5.10;ReadPosRankSum=-0.932;VQSLOD=0.1721;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:5.68:115,6,0	1/1:2,0:2:5.92:44,6,0	0/0:13,0:6:16.76:0,17,123	0/1:8,0:2:0:0,0,0	0/1:3,0:3:0:0,0,0	1/1:4,1:5:11.27:64,11,0	1/1:12,0:10:17.10:113,17,0	1/1:6,1:4:0.47:2,0,0	0/1:6,0:4:11.57:14,0,12	1/1:5,0:5:8.50:64,9,0	1/1:6,0:3:2.67:26,3,0	1/1:5,0:4:2.68:11,3,0	1/1:2,4:5:6.01:66,6,0	1/1:9,0:8:2.13:17,2,0	1/1:9,0:8:6.16:39,6,0	1/1:2,4:4:3.01:41,3,0	0/1:8,0:7:8.74:49,0,9	1/1:5,1:5:5.58:27,6,0	1/1:5,0:3:8.58:58,9,0	./.	1/1:9,0:6:3.66:25,4,0	1/1:5,0:3:2.42:16,2,0	1/1:7,0:6:2.76:19,3,0	1/1:12,0:10:14.10:118,14,0	1/1:4,0:3:2.93:26,3,0	1/1:11,0:7:8.20:57,8,0	1/1:6,0:4:5.67:28,6,0	0/1:5,0:3:0:0,0,0
chr10	89628386	.	CT	C	1134.51	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.962;DP=479;FS=4.666;HRun=1;HaplotypeScore=54.6875;InbreedingCoeff=0.9395;MQ=96.02;MQ0=0;MQRankSum=-2.904;QD=33.37;ReadPosRankSum=0.494;VQSLOD=3.1405;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.27:0,90,1399	0/0:6,0:6:18.06:0,18,288	0/0:26,0:26:71.79:0,72,1092	0/0:23,0:23:69.07:0,69,1043	0/0:8,0:8:18.06:0,18,288	1/1:0,15:15:36.12:501,36,0	1/1:0,19:19:54.18:755,54,0	0/0:16,0:16:45.14:0,45,678	0/0:10,0:10:27.08:0,27,400	0/0:12,0:12:36.12:0,36,575	0/0:12,0:12:33.11:0,33,527	0/0:17,0:17:45.14:0,45,689	0/0:11,0:11:30.08:0,30,447	0/0:19,0:19:42.12:0,42,638	0/0:28,0:28:72.24:0,72,1136	0/0:19,0:19:51.16:0,51,777	0/0:31,0:31:90.31:0,90,1433	0/0:18,0:18:54.18:0,54,856	0/0:19,0:19:57.15:0,57,862	0/0:11,0:11:33.11:0,33,527	0/0:35,0:35:99:0,105,1624	0/0:17,0:17:45.15:0,45,719	0/0:11,0:11:30.10:0,30,472	0/0:23,0:23:69.20:0,69,1037	0/0:14,0:14:39.13:0,39,616	0/0:13,0:13:39.13:0,39,601	0/0:12,0:11:36.12:0,36,575	0/0:2,0:2:6.02:0,6,96
chr10	89629241	.	CA	C	7337.51	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.197;DP=703;FS=3.348;HRun=8;HaplotypeScore=71.1284;InbreedingCoeff=0.9943;MQ=70.49;MQ0=0;MQRankSum=-0.046;QD=24.71;ReadPosRankSum=1.026;VQSLOD=5.7171;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,2:54:89.48:0,89,1632	0/0:10,0:10:17.87:0,18,217	0/0:17,0:17:33.06:0,33,375	0/0:6,0:6:12.03:0,12,135	1/1:1,26:27:63.09:608,63,0	0/0:26,0:26:72.22:0,72,870	0/0:28,0:28:81.24:0,81,967	1/1:1,23:24:69.05:646,69,0	1/1:3,22:25:63.10:608,63,0	0/0:22,0:23:60.04:0,60,693	0/0:22,0:22:57.17:0,57,688	1/1:0,19:19:48.08:463,48,0	0/0:12,0:12:33.10:0,33,398	1/1:1,19:20:51.08:493,51,0	0/0:24,0:24:66.20:0,66,797	0/0:34,1:35:73.33:0,73,1167	0/0:22,0:22:63.17:0,63,747	1/1:1,21:22:63.10:608,63,0	1/1:1,27:28:78.13:753,78,0	1/1:1,28:29:72.11:695,72,0	1/1:2,36:38:99:956,99,0	1/1:6,21:27:60.09:579,60,0	0/0:14,0:14:39.11:0,39,460	0/0:41,0:41:99:0,108,1305	0/0:15,0:15:39.12:0,39,471	0/0:31,0:31:90.28:0,90,1087	1/1:2,36:38:96.15:927,96,0	0/0:26,0:26:69.20:0,69,821
chr10	89629519	.	CTCTTCTTCTTCT	C	40.24	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=-1.877;DP=628;FS=3.898;HRun=0;HaplotypeScore=241.2493;InbreedingCoeff=0.7155;MQ=57.03;MQ0=12;MQRankSum=-2.182;QD=0.82;ReadPosRankSum=-1.179;VQSLOD=2.4274;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:15.89:0,16,214	0/0:10,0:12:11.94:0,12,173	./.	./.	0/0:37,0:37:52.58:0,53,1372	1/1:16,8:23:5.94:41,6,0	1/1:25,0:22:11.88:103,12,0	0/0:46,0:45:1.41:0,1,4	0/0:16,0:16:15.05:0,15,511	0/0:27,0:27:33.10:0,33,1098	0/0:15,0:17:27.08:0,27,822	0/0:17,0:17:9.03:0,9,321	0/0:20,0:19:21.04:0,21,571	0/0:19,0:19:15.05:0,15,396	0/0:19,0:19:12.03:0,12,223	0/0:19,0:20:9.03:0,9,340	0/0:17,0:17:8.95:0,9,135	0/0:11,0:10:9.03:0,9,217	0/0:16,0:15:12.04:0,12,373	0/0:27,0:27:30.07:0,30,738	0/0:27,0:27:22.63:0,23,464	0/0:23,0:22:27.06:0,27,617	0/0:29,0:28:30.06:0,30,699	0/0:26,0:25:25.90:0,26,615	0/0:22,0:23:38.95:0,39,1113	0/0:25,0:25:36.12:0,36,1494	0/0:19,0:18:27.02:0,27,792	0/0:30,0:31:27.09:0,27,993
chr10	89629537	.	T	TTCC	3931.68	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=13.094;DP=602;FS=3.596;HRun=0;HaplotypeScore=122.3300;InbreedingCoeff=0.7090;MQ=46.00;MQ0=29;MQRankSum=-4.614;QD=14.56;ReadPosRankSum=0.356;VQSLOD=3.2821;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:62.57:0,63,500	0/0:8,0:8:23.91:0,24,200	0/0:10,0:4:5.23:0,5,90	0/0:5,0:4:9.02:0,9,94	1/1:41,0:38:85.73:752,86,0	0/0:22,0:21:44.94:0,45,381	0/0:32,0:25:51.16:0,51,407	0/1:39,0:34:32.63:384,0,33	1/1:12,0:12:19.63:276,20,0	0/0:29,0:28:45.39:0,45,532	0/0:15,0:15:9.66:0,10,321	1/1:3,18:18:9.03:189,9,0	0/0:19,0:18:9.65:0,10,263	1/1:18,0:16:38.54:291,39,0	0/0:14,0:13:31.77:0,32,262	0/1:14,0:14:16.36:16,0,241	0/0:17,0:17:30.21:0,30,236	0/1:14,0:10:26.06:151,0,26	1/1:14,0:13:13.31:192,13,0	1/1:26,0:25:54.50:455,54,0	1/1:25,0:25:39.68:467,40,0	1/1:28,0:25:59.80:509,60,0	0/0:27,0:24:63.48:0,63,499	0/0:34,0:29:60.71:0,61,506	0/0:22,0:22:18.57:0,19,442	0/0:27,0:26:57.13:0,57,532	1/1:17,1:16:7.96:251,8,0	0/0:25,0:25:56.72:0,57,506
chr10	89629540	.	T	TCTTCC	546.38	PASS	AB=0.960;AC=9;AF=0.161;AN=56;BaseQRankSum=12.330;DP=594;FS=3.287;HRun=0;HaplotypeScore=150.5970;InbreedingCoeff=0.0340;MQ=45.26;MQ0=31;MQRankSum=1.682;QD=3.07;ReadPosRankSum=4.069;VQSLOD=2.5913;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:63.19:0,63,1172	0/0:7,0:7:21.07:0,21,404	0/0:10,0:4:11.40:0,11,155	0/0:4,0:3:9.03:0,9,197	0/1:37,3:37:53.42:195,0,53	0/0:22,0:21:45.15:0,45,923	0/0:36,0:28:49.11:0,49,987	0/0:35,0:30:36.66:0,37,489	0/1:11,1:12:0.55:107,0,1	0/0:29,0:28:69.12:0,69,1436	0/0:16,0:16:44.77:0,45,844	1/1:20,0:17:0.24:13,0,0	0/0:19,0:18:45.08:0,45,807	0/0:17,0:15:1.08:0,1,79	0/0:14,0:13:33.11:0,33,690	0/0:14,0:14:38.88:0,39,700	0/0:16,0:16:30.51:0,31,629	0/1:13,0:9:12.75:13,0,146	0/1:14,1:13:78:78,0,83	0/1:26,1:26:45.48:135,0,45	0/1:23,0:23:34.75:63,0,35	0/1:27,1:25:64.24:77,0,64	0/0:26,0:23:66.23:0,66,1281	0/0:34,0:30:71.99:0,72,1272	0/0:22,0:22:62.63:0,63,1190	0/0:27,0:26:73.67:0,74,1315	0/0:17,0:15:7.89:0,8,54	0/0:24,0:24:49.79:0,50,1124
chr10	89629596	.	C	CCT	493.53	PASS	AB=0.912;AC=25;AF=0.568;AN=44;BaseQRankSum=2.044;DP=543;FS=17.678;HRun=0;HaplotypeScore=115.7271;InbreedingCoeff=0.3892;MQ=33.33;MQ0=71;MQRankSum=-1.149;QD=1.75;ReadPosRankSum=-3.902;VQSLOD=-0.0665;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:15:11.42:0,11,58	1/1:6,1:7:3.01:45,3,0	./.	./.	./.	1/1:24,0:24:20.93:166,21,0	0/1:24,3:21:71.08:80,0,71	1/1:25,0:22:15.93:98,16,0	0/1:15,0:16:0:0,0,0	0/1:20,1:20:35.24:35,0,56	0/0:12,0:12:11.97:0,12,115	1/1:20,0:17:2.60:10,3,0	0/0:10,0:8:9.02:0,9,98	1/1:15,0:14:8.53:49,9,0	1/1:14,1:14:6.01:71,6,0	0/0:16,0:19:23.42:0,23,204	0/1:11,4:16:25.25:40,0,25	./.	1/1:19,0:16:2.68:11,3,0	0/1:25,0:22:0.15:0,0,0	1/1:8,0:8:2.93:19,3,0	./.	0/0:14,0:12:5.70:0,6,65	0/0:28,0:24:8.75:0,9,79	0/0:13,0:14:8.81:0,9,78	1/1:24,0:22:0.89:2,1,0	1/1:18,0:16:2.74:12,3,0	./.
chr10	89629645	.	TAATCCCAG	T	1960.62	PASS	AB=0.716;AC=15;AF=0.288;AN=52;BaseQRankSum=6.191;DP=460;FS=19.873;HRun=0;HaplotypeScore=128.9547;InbreedingCoeff=0.7284;MQ=82.50;MQ0=8;MQRankSum=-6.786;QD=16.34;ReadPosRankSum=-0.246;VQSLOD=1.6755;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:51.13:0,51,1961	0/0:5,0:5:15.05:0,15,618	0/0:45,0:29:75.25:0,75,2747	0/0:56,0:29:57.64:0,58,2111	0/0:1,10:11:0.47:0,0,1	0/0:18,0:18:48.15:0,48,1942	0/0:21,0:21:54.19:0,54,2298	1/1:4,9:13:27.08:675,27,0	0/1:3,3:6:2.24:74,0,2	0/0:18,0:18:51.18:0,51,2144	0/0:11,0:11:27.09:0,27,1107	1/1:4,12:16:12:323,12,0	0/0:17,0:16:45.15:0,45,1791	1/1:3,14:17:5.69:162,6,0	0/0:19,0:19:54.19:0,54,2255	0/1:27,1:28:9.13:9,0,2885	0/0:18,0:18:48.16:0,48,2017	./.	1/1:3,6:9:18.03:373,18,0	0/1:1,14:15:0:0,0,1	1/1:2,4:6:2.54:25,3,0	./.	0/0:13,0:13:30.10:0,30,1148	0/0:19,0:19:36.12:0,36,1372	0/0:13,0:13:39.13:0,39,1608	0/0:18,0:18:48.16:0,48,2032	1/1:3,7:10:17.61:487,18,0	0/0:4,0:4:12.04:0,12,466
chr10	89629750	.	C	CA	11740.01	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=17.147;DP=727;FS=5.419;HRun=1;HaplotypeScore=94.3609;InbreedingCoeff=0.9999;MQ=83.91;MQ0=0;MQRankSum=-4.244;QD=42.23;ReadPosRankSum=1.524;VQSLOD=4.7972;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,1960	0/0:10,0:10:30.10:0,30,414	0/0:28,0:28:72.24:0,72,1003	0/0:22,0:22:63.20:0,63,843	1/1:0,25:25:66.23:1055,66,0	0/0:27,0:27:78.26:0,78,1088	0/0:40,0:40:99:0,108,1508	1/1:2,23:25:69.24:1103,69,0	1/1:0,21:21:57.19:910,57,0	0/0:24,0:24:63.21:0,63,868	0/0:23,0:23:66.21:0,66,903	1/1:0,33:31:81.21:1293,81,0	0/0:29,0:29:78.12:0,78,1084	1/1:1,19:20:54.18:862,54,0	0/0:27,0:27:72.24:0,72,1005	0/0:22,0:22:63.21:0,63,881	0/0:39,0:39:99:0,114,1593	1/1:0,20:20:51.17:815,51,0	1/1:1,19:20:60.20:954,60,0	1/1:0,22:22:60.20:959,60,0	1/1:1,47:48:99:2014,126,0	1/1:0,22:22:57.19:911,57,0	0/0:19,0:19:57.19:0,57,797	0/0:37,0:37:99:0,108,1505	0/0:22,0:22:66.22:0,66,923	0/0:20,0:20:60.20:0,60,838	1/1:0,22:22:54.18:863,54,0	0/0:12,0:12:33.11:0,33,461
chr10	89629839	.	CA	C	1916.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.114;DP=753;FS=5.908;HRun=2;HaplotypeScore=95.3518;InbreedingCoeff=0.9992;MQ=83.30;MQ0=0;MQRankSum=-3.213;QD=34.84;ReadPosRankSum=2.338;VQSLOD=3.8693;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,54:54:99:2011,156,0	0/0:19,0:19:54.16:0,54,786	0/0:34,0:34:87.54:0,88,1346	0/0:25,0:25:69.20:0,69,981	0/0:27,0:27:75.23:0,75,1102	0/0:11,0:11:30.10:0,30,449	0/0:38,0:38:99:0,114,1670	0/0:32,0:32:90.30:0,90,1349	0/0:23,0:23:69.19:0,69,982	0/0:20,0:20:57.19:0,57,854	0/0:17,0:17:48.16:0,48,719	0/0:30,0:30:84.28:0,84,1246	0/0:24,0:24:69.23:0,69,1033	0/0:32,0:32:87.29:0,87,1302	0/0:35,0:35:99:0,99,1466	0/0:31,0:31:90.29:0,90,1329	0/0:36,0:36:99:0,108,1595	0/0:19,0:19:54.10:0,54,748	0/0:21,0:21:63.21:0,63,944	0/0:20,0:20:60.16:0,60,874	0/0:57,0:57:99:0,163,2377	0/0:18,0:18:51.17:0,51,764	0/0:22,0:22:63.21:0,63,938	0/0:29,0:29:87.28:0,87,1282	0/0:20,0:20:57.19:0,57,850	0/0:25,0:25:75.25:0,75,1106	0/0:22,0:22:57.19:0,57,852	0/0:11,0:11:33.11:0,33,495
chr10	89630019	.	AATGTT	A	13836.02	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.961;DP=596;FS=14.594;HRun=0;HaplotypeScore=119.4806;InbreedingCoeff=0.9984;MQ=70.50;MQ0=0;MQRankSum=-9.554;QD=65.26;ReadPosRankSum=0.536;VQSLOD=5.3390;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,166,5279	0/0:6,0:6:18.06:0,18,600	0/0:10,0:10:24.07:0,24,670	0/0:10,0:10:26.90:0,27,641	1/1:3,23:26:69.24:1509,69,0	0/0:17,0:17:51.16:0,51,1623	0/0:13,0:13:39.12:0,39,1202	1/1:0,25:25:75.24:1650,75,0	1/1:0,15:15:45.15:1046,45,0	0/0:31,0:31:93.32:0,93,3060	0/0:18,0:18:54.19:0,54,1752	1/1:0,24:24:62.98:1464,63,0	0/0:20,0:20:60.21:0,60,1957	1/1:0,14:14:42.14:976,42,0	0/0:30,0:30:90.30:0,90,2889	0/0:28,0:28:84.29:0,84,2720	0/0:21,0:21:63.22:0,63,1994	1/1:2,17:19:57.20:1297,57,0	1/1:0,20:20:60.16:1281,60,0	1/1:1,15:16:45.15:1014,45,0	1/1:3,15:18:54.18:1193,54,0	1/1:0,15:15:45.15:1029,45,0	0/0:23,0:23:66.23:0,66,2146	0/0:39,0:39:99:0,117,3867	0/0:19,0:19:48.16:0,48,1546	0/0:32,0:32:93.28:0,93,2846	1/1:2,18:20:60.21:1378,60,0	0/0:12,0:12:36.12:0,36,1085
chr10	89630092	.	GA	G	6590.42	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=13.907;DP=619;FS=10.291;HRun=7;HaplotypeScore=76.3197;InbreedingCoeff=0.9998;MQ=85.47;MQ0=0;MQRankSum=-3.255;QD=25.35;ReadPosRankSum=2.223;VQSLOD=5.1457;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.18:0,93,1108	0/0:11,0:11:30.10:0,30,377	0/0:20,0:20:36.05:0,36,420	0/0:28,0:28:33.77:0,34,486	1/1:2,23:25:54.12:550,54,0	0/0:18,0:18:48.15:0,48,604	0/0:24,0:24:69.21:0,69,856	1/1:4,25:29:75.10:746,75,0	1/1:3,21:24:60.13:611,60,0	0/0:23,0:23:63.17:0,63,758	0/0:18,0:18:48.13:0,48,578	1/1:6,18:24:57.11:574,57,0	0/0:16,0:16:45.14:0,45,556	1/1:2,11:13:33.07:336,33,0	0/0:20,0:20:57.17:0,57,706	0/0:24,0:24:69.22:0,69,867	0/0:21,0:21:63.19:0,63,780	1/1:0,23:23:60.14:612,60,0	1/1:5,15:19:51.10:513,51,0	1/1:5,23:28:69.11:692,69,0	1/1:1,24:25:63.14:642,63,0	1/1:4,21:25:63.14:642,63,0	0/0:17,0:17:45.13:0,45,543	0/0:21,0:21:60.18:0,60,742	0/0:20,0:20:54.16:0,54,658	0/0:24,0:24:69.21:0,69,847	1/1:2,22:24:66.15:672,66,0	0/0:21,0:21:60.04:0,60,718
chr10	89630368	.	CA	C	6617.39	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=14.180;DP=597;FS=7.079;HRun=9;HaplotypeScore=96.0454;InbreedingCoeff=0.9847;MQ=84.44;MQ0=0;MQRankSum=-2.433;QD=19.41;ReadPosRankSum=4.711;VQSLOD=4.7857;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,35:39:90.05:823,90,0	1/1:1,5:6:12.01:110,12,0	0/0:28,0:29:61.76:0,62,588	0/0:12,1:14:24.93:0,25,252	1/1:8,22:30:10.55:396,11,0	0/0:19,0:19:42.10:0,42,472	0/0:23,0:23:63.15:0,63,699	1/1:8,16:24:28.04:373,28,0	1/1:1,13:14:33.02:302,33,0	0/0:25,0:25:72.21:0,72,831	0/0:20,0:20:27.13:0,27,511	1/1:0,16:16:36.02:329,36,0	0/0:17,0:17:51.12:0,51,566	1/1:1,19:20:51:466,51,0	1/1:5,17:22:42.01:384,42,0	0/0:16,0:16:39.12:0,39,450	1/1:2,22:24:53.98:485,54,0	1/1:6,18:24:42.02:384,42,0	1/1:6,18:23:53.98:487,54,0	1/1:4,21:25:60.03:549,60,0	1/1:0,33:33:78.02:707,78,0	1/1:4,19:23:57.03:521,57,0	0/0:13,1:14:11.61:0,12,358	0/0:19,0:19:57.13:0,57,629	0/0:22,0:23:66.02:0,66,732	0/0:23,0:23:54.14:0,54,608	1/1:5,12:17:33.01:301,33,0	0/0:14,0:14:42.10:0,42,464
chr10	89631978	.	GGTGTGT	G	2023.77	PASS	AB=0.898;AC=26;AF=0.500;AN=52;BaseQRankSum=5.573;DP=659;FS=7.124;HRun=0;HaplotypeScore=134.8968;InbreedingCoeff=0.5341;MQ=68.28;MQ0=15;MQRankSum=-6.370;QD=5.38;ReadPosRankSum=1.081;VQSLOD=1.7540;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:41:59.64:60,0,406	1/1:6,2:12:9.03:145,9,0	0/0:21,0:12:0.47:0,0,1	./.	0/0:10,1:12:0:0,0,0	0/0:5,0:11:9.03:0,9,232	0/0:30,0:39:15.94:0,16,347	1/1:23,0:22:2.92:54,3,0	1/1:18,3:22:15.93:259,16,0	0/0:23,0:23:17.68:0,18,337	0/1:10,1:11:54.70:55,0,65	1/1:19,6:25:12.04:218,12,0	0/0:21,0:21:31.52:0,32,860	1/1:24,3:27:6.02:121,6,0	1/1:8,9:17:21.07:425,21,0	0/0:18,0:20:22.41:0,22,649	0/1:29,4:35:20.16:206,0,20	1/1:13,7:22:12.04:186,12,0	./.	1/1:10,2:13:12.02:165,12,0	1/1:56,0:54:3.89:63,4,0	1/1:15,3:19:3.48:62,3,0	0/0:14,0:14:14.92:0,15,457	0/1:33,1:38:1.84:2,0,1169	0/0:19,0:21:24.97:0,25,656	0/0:21,0:20:21.94:0,22,411	1/1:6,6:12:8.82:182,9,0	0/0:17,0:21:17.20:0,17,273
chr10	89635637	.	T	TA	197.69	PASS	AB=0.938;AC=5;AF=0.089;AN=56;BaseQRankSum=2.534;DP=382;FS=8.726;HRun=9;HaplotypeScore=60.9513;InbreedingCoeff=0.6345;MQ=66.79;MQ0=4;MQRankSum=-1.407;QD=5.65;ReadPosRankSum=0.312;VQSLOD=0.3433;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:59.96:0,60,369	0/0:5,0:5:8.67:0,9,48	0/0:30,0:15:15.19:0,15,128	0/0:17,0:8:8.29:0,8,45	0/0:15,0:15:29.97:0,30,256	1/1:6,10:16:23.99:241,24,0	1/1:2,2:4:6.02:66,6,0	0/0:21,0:21:31.31:0,31,237	0/0:8,0:8:23.97:0,24,202	0/0:13,0:13:26.85:0,27,221	0/0:12,0:12:3.91:0,4,201	0/0:5,0:5:15:0,15,130	0/0:19,0:19:27.20:0,27,327	0/0:7,0:7:17.97:0,18,151	0/0:19,0:19:37.87:0,38,220	0/0:8,0:8:17.86:0,18,142	0/0:23,0:23:52.36:0,52,296	0/0:16,0:16:38.87:0,39,318	0/1:14,1:15:0.25:0,0,218	0/0:17,0:17:26.91:0,27,223	0/0:7,0:7:17.97:0,18,151	0/0:2,0:2:5.99:0,6,49	0/0:9,0:9:8.84:0,9,65	0/0:6,0:6:14.86:0,15,127	0/0:16,0:16:29.92:0,30,251	0/0:13,0:13:20.79:0,21,177	0/0:16,0:16:32.75:0,33,263	0/0:12,0:13:13.94:0,14,173
chr10	89635646	.	AGG	A	1380.76	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=0.401;DP=412;FS=16.896;HRun=10;HaplotypeScore=59.4945;InbreedingCoeff=0.9529;MQ=68.45;MQ0=4;MQRankSum=0.718;QD=18.66;ReadPosRankSum=5.648;VQSLOD=0.5689;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,21:29:45.11:502,45,0	1/1:1,4:5:9.02:100,9,0	0/0:33,0:18:39.52:0,40,492	0/0:20,0:10:23.54:0,24,246	0/0:14,0:14:36.12:0,36,546	0/0:14,0:16:16.47:0,16,400	0/0:4,0:4:12.04:0,12,162	0/0:19,0:20:41.83:0,42,610	0/0:13,0:13:36.12:0,36,561	0/0:15,0:15:42.14:0,42,638	0/0:13,0:13:32.94:0,33,478	0/0:7,0:7:21.07:0,21,320	0/0:22,0:22:48.16:0,48,724	0/0:10,0:10:27.09:0,27,420	1/1:2,18:20:36.09:400,36,0	0/0:8,0:9:20.43:0,20,291	1/1:2,18:20:48.13:535,48,0	0/0:16,0:16:33.11:0,33,515	0/0:16,0:16:42:0,42,589	0/0:16,0:16:33.11:0,33,516	0/0:9,0:9:21.05:0,21,291	0/0:4,0:4:12.04:0,12,187	0/0:11,0:11:21.07:0,21,308	0/0:7,0:7:15.05:0,15,235	0/0:19,0:22:45.15:0,45,677	0/0:11,0:11:24.52:0,25,350	0/0:16,0:16:37.89:0,38,538	0/0:12,0:13:35.98:0,36,512
chr10	89637163	.	AT	A	5160.07	PASS	AB=0.590;AC=25;AF=0.446;AN=56;BaseQRankSum=11.965;DP=633;FS=1.426;HRun=11;HaplotypeScore=63.7994;InbreedingCoeff=0.9174;MQ=67.23;MQ0=0;MQRankSum=1.230;QD=17.79;ReadPosRankSum=0.983;VQSLOD=5.8445;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,2:52:99:0,116,1388	0/0:6,0:6:12.03:0,12,128	0/0:11,0:10:14.53:0,15,112	0/0:15,0:10:14.20:0,14,101	1/1:5,30:35:57.89:681,58,0	1/1:4,17:21:47.94:394,48,0	1/1:3,16:19:12.96:313,13,0	1/1:10,30:40:80.82:659,81,0	1/1:2,18:20:50.94:419,51,0	0/0:21,0:21:54.13:0,54,569	0/0:26,0:26:69.17:0,69,735	1/1:5,19:24:47.93:394,48,0	0/0:26,2:28:47.53:0,48,703	1/1:2,13:15:32.96:271,33,0	0/0:18,1:19:26.49:0,26,481	0/0:13,0:14:35.92:0,36,365	0/0:35,0:35:90.18:0,90,941	0/1:7,16:23:12.21:294,0,12	1/1:3,10:13:26.96:221,27,0	1/1:2,21:24:61.96:498,62,0	1/1:2,10:13:31.99:252,32,0	1/1:1,20:21:35.67:295,36,0	0/0:26,0:26:49.39:0,49,654	0/0:18,1:19:17.46:0,17,391	0/0:22,0:22:54.10:0,54,552	0/0:24,0:24:63.13:0,63,660	1/1:2,20:22:56.93:468,57,0	0/0:25,0:25:66.10:0,66,680
chr10	89637517	.	TA	T	11447.99	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.234;DP=780;FS=4.311;HRun=2;HaplotypeScore=75.2803;InbreedingCoeff=0.9997;MQ=75.46;MQ0=0;MQRankSum=-1.559;QD=36.00;ReadPosRankSum=0.724;VQSLOD=5.4303;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,147,2136	0/0:8,0:8:24.05:0,24,337	0/0:23,0:23:60.18:0,60,852	0/0:28,0:28:78.26:0,78,1156	1/1:0,39:39:99:1324,105,0	0/0:31,0:31:90.29:0,90,1309	0/0:23,0:23:69.20:0,69,1010	1/1:2,34:36:99:1258,99,0	1/1:1,32:33:96.31:1246,96,0	0/0:31,0:31:93.31:0,93,1376	0/0:20,0:20:60.19:0,60,879	1/1:0,21:21:60.19:777,60,0	0/0:26,0:26:78.26:0,78,1167	1/1:0,12:12:33.11:428,33,0	0/0:38,0:38:99:0,114,1666	0/0:27,0:27:81.27:0,81,1195	0/0:25,0:25:75.21:0,75,1064	1/1:0,20:20:60.20:779,60,0	1/1:1,37:38:99:1424,111,0	1/1:1,29:30:81.26:1051,81,0	1/1:1,33:34:93.30:1207,93,0	1/1:0,30:30:80.62:981,81,0	0/0:30,0:30:84.26:0,84,1219	0/0:40,0:40:99:0,120,1778	0/0:17,0:17:51.16:0,51,735	0/0:29,0:29:84.28:0,84,1255	1/1:0,25:25:75.24:973,75,0	0/0:17,0:17:51.12:0,51,699
chr10	89639143	.	AGC	A	8570.70	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.915;DP=534;FS=7.837;HRun=0;HaplotypeScore=83.3781;InbreedingCoeff=0.9978;MQ=71.19;MQ0=0;MQRankSum=-4.085;QD=43.73;ReadPosRankSum=-0.778;VQSLOD=5.9998;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.30:0,87,1752	0/0:13,0:13:39.13:0,39,771	0/0:8,0:8:20.71:0,21,318	0/0:11,0:11:30.09:0,30,500	1/1:0,10:10:27.09:440,27,0	0/0:19,0:19:57.20:0,57,1156	0/0:19,0:19:57.18:0,57,1122	1/1:0,20:20:57.19:930,57,0	1/1:0,29:29:81.28:1307,81,0	0/0:23,0:23:69.22:0,69,1335	0/0:10,0:10:30.09:0,30,573	1/1:0,19:19:51.17:831,51,0	0/0:21,0:21:63.20:0,63,1239	1/1:0,15:15:39.13:636,39,0	0/0:21,0:21:63.22:0,63,1270	0/0:20,0:20:60.19:0,60,1166	0/0:33,0:33:99:0,99,1956	1/1:1,16:17:51.11:777,51,0	1/1:0,15:15:45.11:680,45,0	1/1:0,7:7:21.07:343,21,0	1/1:0,38:38:90.22:1410,90,0	1/1:1,6:8:24.08:389,24,0	0/0:8,0:8:24.08:0,24,487	0/0:43,0:43:99:0,129,2593	0/0:22,0:22:66.23:0,66,1341	0/0:26,0:26:75.26:0,75,1519	1/1:0,17:17:51.17:827,51,0	0/0:11,0:11:30.10:0,30,609
chr10	89639175	.	CCT	C	2142.21	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=11.085;DP=480;FS=0.382;HRun=0;HaplotypeScore=87.7086;InbreedingCoeff=0.9866;MQ=73.11;MQ0=1;MQRankSum=-5.383;QD=12.10;ReadPosRankSum=-7.345;VQSLOD=1.7746;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1644	0/0:10,0:10:30.10:0,30,494	0/0:11,0:11:22.85:0,23,394	0/0:13,0:13:32.94:0,33,486	1/1:9,1:10:18.81:162,19,0	0/0:17,0:17:51.17:0,51,858	0/0:17,0:17:51.17:0,51,882	1/1:9,0:9:17.50:140,17,0	1/1:21,1:22:53.65:288,54,0	0/0:25,0:25:75.26:0,75,1267	0/0:7,0:7:21.07:0,21,360	1/1:20,0:20:45.83:252,46,0	0/0:19,0:19:54.15:0,54,877	1/1:17,1:18:37.97:272,38,0	0/0:18,0:18:51.15:0,51,854	0/0:15,0:15:42.05:0,42,672	0/0:24,0:24:72.23:0,72,1216	1/1:17,4:21:43.62:321,44,0	1/1:13,1:14:31.04:222,31,0	1/1:2,1:3:8.91:80,9,0	1/1:33,1:32:43.90:300,44,0	1/1:11,0:11:21.90:114,22,0	0/0:8,0:8:24.02:0,24,305	0/0:36,0:36:99:0,105,1705	0/0:22,0:22:66.23:0,66,1141	0/0:21,0:21:60.18:0,60,960	1/1:13,2:15:35.45:216,35,0	0/0:7,0:7:21.07:0,21,352
chr10	89639176	.	CT	C	4471.25	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=10.320;DP=493;FS=3.238;HRun=1;HaplotypeScore=76.7005;InbreedingCoeff=0.9880;MQ=74.41;MQ0=1;MQRankSum=-5.151;QD=24.84;ReadPosRankSum=-7.479;VQSLOD=2.3378;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1295	0/0:10,0:10:30.04:0,30,369	0/0:12,0:12:26.63:0,27,332	0/0:15,0:15:35.79:0,36,399	1/1:7,2:9:19.17:169,19,0	0/0:17,0:17:51.12:0,51,672	0/0:19,0:19:57.16:0,57,743	1/1:6,2:8:20.96:198,21,0	1/1:8,15:23:68.90:771,69,0	0/0:27,0:27:75.22:0,75,989	0/0:8,0:8:21.06:0,21,281	1/1:7,14:21:57.04:647,57,0	0/0:20,0:20:60.14:0,60,747	1/1:11,6:17:42.31:400,42,0	0/0:17,0:17:51.16:0,51,678	0/0:14,1:15:42.11:0,42,540	0/0:25,0:25:75.21:0,75,982	1/1:6,15:21:53.97:606,54,0	1/1:9,4:13:32.87:305,33,0	1/1:4,0:4:8.96:86,9,0	1/1:25,10:33:62.17:585,62,0	1/1:7,5:12:24.01:289,24,0	0/0:8,0:8:24.02:0,24,261	0/0:35,0:35:99:0,105,1339	0/0:22,0:22:66.22:0,66,899	0/0:23,0:23:60.15:0,60,774	1/1:7,10:17:38.87:415,39,0	0/0:7,0:7:21.06:0,21,269
chr10	89639536	.	GAA	G	9549.33	PASS	AB=0.913;AC=23;AF=0.411;AN=56;BaseQRankSum=14.716;DP=616;FS=0.995;HRun=4;HaplotypeScore=79.6270;InbreedingCoeff=0.9182;MQ=82.69;MQ0=0;MQRankSum=-2.333;QD=35.63;ReadPosRankSum=2.398;VQSLOD=4.3215;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,2515	0/0:8,0:8:24.08:0,24,436	0/0:29,0:28:75.17:0,75,1361	0/0:21,0:20:54.18:0,54,935	1/1:0,23:23:54.18:795,54,0	0/0:30,0:30:90.31:0,90,1686	0/0:25,0:25:75.26:0,75,1405	1/1:1,23:24:66.21:952,66,0	1/1:1,31:32:78.26:1149,78,0	0/0:26,0:26:78.26:0,78,1431	0/0:10,0:10:23.91:0,24,419	1/1:0,29:29:81.27:1193,81,0	0/0:17,1:18:9.95:0,10,844	1/1:0,13:13:39.13:574,39,0	0/0:26,0:26:72.25:0,72,1349	0/1:19,2:21:28.18:28,0,914	0/0:25,0:25:75.26:0,75,1395	1/1:0,19:19:57.19:839,57,0	1/1:5,20:25:60.20:884,60,0	1/1:0,8:8:21.07:309,21,0	1/1:1,29:30:81.27:1193,81,0	1/1:1,13:14:39.13:574,39,0	0/0:10,0:10:27.09:0,27,491	0/0:21,0:21:63.20:0,63,1148	0/0:21,0:21:63.22:0,63,1158	0/0:22,0:22:60.21:0,60,1119	1/1:4,26:30:72.24:1059,72,0	0/0:9,0:9:27.09:0,27,492
chr10	89639721	.	CT	C	3200.38	PASS	AB=0.897;AC=32;AF=0.593;AN=54;BaseQRankSum=7.269;DP=447;FS=4.037;HRun=13;HaplotypeScore=49.1530;InbreedingCoeff=0.8443;MQ=62.09;MQ0=4;MQRankSum=1.567;QD=10.63;ReadPosRankSum=0.863;VQSLOD=2.9261;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,24:32:35.74:263,36,0	1/1:5,8:13:14.85:109,15,0	0/0:10,0:8:6.14:0,6,35	./.	1/1:4,29:32:73.43:516,73,0	0/0:22,0:22:56.92:0,57,534	0/0:5,0:5:9.01:0,9,88	1/1:9,22:29:62.43:449,62,0	1/1:2,11:13:29.82:219,30,0	0/0:14,0:14:30.05:0,30,292	0/1:15,2:15:0.71:1,0,282	1/1:2,10:12:23.85:175,24,0	0/0:13,0:14:32.80:0,33,284	1/1:1,7:8:14.91:109,15,0	1/1:1,16:16:32.73:241,33,0	0/0:14,0:15:35.98:0,36,328	1/1:7,15:22:26.84:197,27,0	1/1:2,14:15:29.82:219,30,0	1/1:8,16:22:47.67:348,48,0	1/1:4,13:17:23.83:175,24,0	1/1:5,4:9:8.19:64,8,0	1/1:0,4:4:8.55:54,9,0	0/0:9,0:9:18.03:0,18,175	0/0:8,0:7:17.97:0,18,158	0/0:22,0:22:53.98:0,54,502	0/1:8,1:9:6.89:7,0,102	1/1:6,17:22:22.30:265,22,0	0/0:23,0:23:63.07:0,63,598
chr10	89642021	.	GA	G	2196.98	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=5.709;DP=372;FS=10.713;HRun=11;HaplotypeScore=56.9619;InbreedingCoeff=0.9160;MQ=83.27;MQ0=4;MQRankSum=-0.644;QD=15.05;ReadPosRankSum=1.982;VQSLOD=3.3921;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:36.05:0,36,364	0/0:4,0:4:9.01:0,9,87	0/0:29,0:19:5.38:0,5,55	0/0:24,0:18:6.32:0,6,79	1/1:1,5:6:11.98:98,12,0	1/1:3,9:12:23.95:197,24,0	1/1:4,11:15:23.95:197,24,0	1/1:2,12:14:35.89:284,36,0	1/1:1,5:7:17.02:129,17,0	0/0:12,0:12:33.08:0,33,343	0/0:6,0:6:12.03:0,12,127	1/1:1,10:11:23.94:197,24,0	0/0:9,0:9:15.04:0,15,159	1/1:3,6:9:14.97:123,15,0	0/0:16,2:18:20.31:0,20,374	0/0:10,0:10:18.04:0,18,185	0/0:27,1:28:41.57:0,42,613	1/1:3,8:11:17.98:148,18,0	1/1:2,11:13:32.88:261,33,0	1/1:1,5:7:17.02:129,17,0	1/1:4,12:16:26.89:214,27,0	1/1:1,9:10:23.97:197,24,0	0/0:13,0:13:23.93:0,24,237	0/0:13,0:13:32.98:0,33,311	0/0:18,0:17:36.08:0,36,374	0/0:11,0:11:27.07:0,27,285	1/1:4,11:15:29.96:246,30,0	0/0:8,1:9:2.46:0,2,230
chr10	89643233	.	T	TG	2667.82	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-7.099;DP=361;FS=0.486;HRun=8;HaplotypeScore=52.3654;InbreedingCoeff=0.8721;MQ=85.42;MQ0=1;MQRankSum=-0.182;QD=15.33;ReadPosRankSum=0.893;VQSLOD=3.3064;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:32.99:0,33,297	0/0:6,0:6:15:0,15,137	0/1:24,0:19:2.97:3,0,178	0/0:22,0:19:38.14:0,38,276	1/1:2,6:8:15:155,15,0	0/0:2,0:16:26.48:0,26,78	0/0:3,0:25:38.70:0,39,113	1/1:5,5:10:12.02:128,12,0	1/1:0,9:9:15.04:173,15,0	0/0:6,0:6:17.99:0,18,157	0/0:9,0:9:21.01:0,21,192	1/1:5,17:22:8.64:353,9,0	0/0:7,0:7:15.01:0,15,137	1/1:1,11:12:24.07:274,24,0	0/0:9,0:9:24.01:0,24,219	0/0:7,0:7:18.01:0,18,164	0/0:20,0:20:53.99:0,54,486	1/1:3,16:20:32.93:361,33,0	1/1:3,7:10:18.52:207,19,0	1/1:0,3:3:5.47:44,5,0	1/1:5,26:32:60.18:691,60,0	1/1:4,7:11:8.73:103,9,0	0/0:5,0:5:9:0,9,81	0/0:6,0:6:8.96:0,9,72	0/0:13,0:13:30.01:0,30,273	0/0:17,0:17:42.02:0,42,384	1/1:1,12:13:11.65:388,12,0	0/0:4,0:4:12.01:0,12,110
chr10	89643631	.	A	AC	1600.48	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-10.699;DP=767;FS=0.000;HRun=3;HaplotypeScore=74.6635;InbreedingCoeff=0.9986;MQ=86.11;MQ0=0;MQRankSum=-2.467;QD=33.34;ReadPosRankSum=-1.749;VQSLOD=3.2869;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,159,1904	0/0:17,0:17:42.13:0,42,504	0/0:28,0:28:72.19:0,72,823	0/0:26,0:26:60.14:0,60,676	0/0:18,0:18:42.11:0,42,483	1/1:0,13:13:33.11:462,33,0	1/1:4,31:35:90.30:1260,90,0	0/0:38,0:38:99:0,108,1265	0/0:17,0:17:51.16:0,51,612	0/0:23,0:23:63.17:0,63,742	0/0:13,0:13:39.11:0,39,459	0/0:26,0:26:72.21:0,72,851	0/0:27,0:27:78.21:0,78,909	0/0:27,0:27:75.23:0,75,900	0/0:34,0:34:99:0,99,1187	0/0:36,0:35:99:0,105,1251	0/0:40,0:40:99:0,117,1367	0/0:33,0:33:90.28:0,90,1079	0/0:13,0:13:36.09:0,36,420	0/0:8,0:8:24.07:0,24,288	0/0:79,0:79:99:0,217,2557	0/0:23,0:23:63.17:0,63,733	0/0:15,0:15:42.12:0,42,492	0/0:28,1:29:45.29:0,45,964	0/0:23,0:23:69.21:0,69,827	0/0:36,0:36:76.35:0,76,1122	0/0:18,0:18:45.14:0,45,540	0/0:13,0:13:39.12:0,39,468
chr10	89645165	.	T	TA	484.90	PASS	AB=0.875;AC=21;AF=0.420;AN=50;BaseQRankSum=1.208;DP=198;FS=0.844;HRun=13;HaplotypeScore=46.7395;InbreedingCoeff=0.4800;MQ=71.14;MQ0=3;MQRankSum=-0.921;QD=5.00;ReadPosRankSum=-1.768;VQSLOD=0.7894;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,8:12:12.01:111,12,0	0/1:2,3:5:8.44:72,0,8	0/0:23,0:6:4.56:0,5,34	0/1:20,0:11:5.04:5,0,51	./.	0/1:6,0:6:0.80:1,0,6	1/1:5,0:4:1.25:3,1,0	1/1:11,0:10:2.92:9,3,0	1/1:4,0:4:7.10:38,7,0	0/0:2,0:2:2.98:0,3,21	0/0:6,0:6:11.86:0,12,82	1/1:2,0:2:5.85:34,6,0	0/0:4,0:4:5.93:0,6,41	./.	1/1:0,3:3:3:28,3,0	0/0:8,0:8:20.83:0,21,144	1/1:2,16:19:35.72:307,36,0	1/1:6,0:6:4.17:11,4,0	0/0:9,0:8:3.70:0,4,10	0/0:1,0:1:2.37:0,2,8	1/1:4,0:4:2.97:20,3,0	./.	0/0:1,0:2:5.01:0,5,26	0/0:6,0:6:17.66:0,18,111	0/0:9,0:10:24.68:0,25,155	0/0:4,0:4:8.93:0,9,62	0/0:2,0:1:1.55:0,2,4	0/0:23,0:23:50.45:0,50,325
chr10	89645263	.	G	GA	982.17	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.663;DP=373;FS=8.680;HRun=9;HaplotypeScore=40.1868;InbreedingCoeff=0.8240;MQ=76.90;MQ0=0;MQRankSum=-0.529;QD=21.35;ReadPosRankSum=-0.142;VQSLOD=3.6370;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:59.99:0,60,521	0/0:2,0:2:6:0,6,52	0/0:7,0:8:10.91:0,11,73	0/0:9,0:10:8.54:0,9,71	0/0:9,0:9:20.96:0,21,178	1/1:0,22:22:60.16:663,60,0	1/1:7,17:24:19.06:438,19,0	0/0:24,0:24:50.97:0,51,442	0/0:19,0:19:50.99:0,51,443	0/0:10,0:10:17.98:0,18,156	0/0:10,0:10:29.95:0,30,251	0/0:17,0:17:44.99:0,45,390	0/0:10,0:10:23.99:0,24,208	0/0:15,1:16:14.85:0,15,357	0/0:19,0:19:50.94:0,51,434	0/0:11,0:11:26.99:0,27,234	0/0:20,0:20:59.99:0,60,521	0/0:12,0:12:32.95:0,33,279	0/0:19,0:19:53.99:0,54,468	0/0:4,0:4:12:0,12,104	0/0:16,0:16:44.97:0,45,387	0/0:3,0:3:9:0,9,78	0/0:3,0:3:9:0,9,78	0/0:18,0:18:47.96:0,48,412	0/0:12,0:12:32.99:0,33,286	0/0:9,0:9:23.99:0,24,208	0/0:10,0:10:26.98:0,27,230	0/0:15,0:16:41.03:0,41,345
chr10	89650437	.	G	GCTG	3190.26	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=4.617;DP=519;FS=98.856;HRun=0;HaplotypeScore=84.6539;InbreedingCoeff=0.8608;MQ=70.10;MQ0=33;MQRankSum=-1.967;QD=13.99;ReadPosRankSum=-0.277;VQSLOD=-0.6222;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:66.12:0,66,875	0/0:9,0:9:15.05:0,15,217	0/0:21,0:16:24.83:0,25,340	0/0:21,0:19:33.11:0,33,477	1/1:13,0:13:15.03:263,15,0	0/0:10,0:10:18.05:0,18,244	0/0:17,0:17:48.16:0,48,691	1/1:15,0:15:11.58:242,12,0	1/1:13,0:12:24.01:358,24,0	0/0:15,0:15:27.05:0,27,306	0/0:9,0:9:9:0,9,91	1/1:25,0:18:26.38:448,26,0	0/0:16,0:15:36.10:0,36,485	1/1:26,0:20:27.50:453,27,0	0/0:30,0:30:57.19:0,57,807	0/1:21,0:19:8.31:8,0,647	0/0:31,0:30:3.67:0,4,786	1/1:19,0:11:18.02:292,18,0	1/1:13,0:12:20.78:211,21,0	1/1:7,4:12:5.58:37,6,0	1/1:29,0:21:33.10:585,33,0	1/1:18,0:17:11.80:228,12,0	0/0:7,0:7:9.03:0,9,130	0/0:29,0:28:72.16:0,72,988	0/0:12,0:12:18.04:0,18,238	0/0:18,0:18:27.03:0,27,331	1/1:24,0:22:18.04:281,18,0	0/0:13,0:13:27.09:0,27,387
chr10	89650449	.	GGTGTGTGTGTGT	G	328.19	PASS	AB=1.000;AC=5;AF=0.104;AN=48;BaseQRankSum=1.454;DP=539;FS=0.000;HRun=0;HaplotypeScore=168.5129;InbreedingCoeff=0.4356;MQ=56.75;MQ0=39;MQRankSum=-1.426;QD=4.10;ReadPosRankSum=1.863;VQSLOD=2.6812;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:0:0,0,0	0/0:7,0:7:3.01:0,3,116	./.	./.	0/0:18,0:16:1.72:0,2,4	0/0:16,0:16:12.93:0,13,519	0/0:23,0:22:7.38:0,7,222	0/0:18,0:18:9.32:0,9,97	./.	0/0:13,0:13:9.03:0,9,310	0/0:7,0:7:9.03:0,9,440	0/0:30,0:22:3.90:0,4,74	0/0:16,0:15:12.51:0,13,266	0/0:28,0:21:7.78:0,8,129	1/1:17,6:23:9.03:295,9,0	0/0:25,0:23:27.09:0,27,1040	1/1:30,0:28:4.79:131,5,0	0/0:21,0:10:6.49:0,6,237	0/0:25,0:24:6.72:0,7,102	0/0:13,0:13:3.69:0,4,9	./.	0/0:12,0:11:2.99:0,3,24	0/0:7,0:7:6.01:0,6,194	0/0:36,0:34:52.12:0,52,2090	0/0:16,0:15:21.07:0,21,885	0/0:15,0:14:7.27:0,7,218	0/0:23,0:20:6.80:0,7,382	0/0:13,0:12:15.05:0,15,442
chr10	89650475	.	T	TGCTGCTG	806.41	PASS	AB=0.973;AC=9;AF=0.161;AN=56;BaseQRankSum=5.185;DP=525;FS=0.000;HRun=0;HaplotypeScore=125.5617;InbreedingCoeff=-0.0444;MQ=42.35;MQ0=47;MQRankSum=-7.112;QD=5.20;ReadPosRankSum=-3.482;VQSLOD=1.2953;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:57.03:0,57,1329	0/0:5,0:5:8.97:0,9,240	0/0:6,0:1:3.01:0,3,34	0/0:16,0:5:9.03:0,9,177	0/0:12,3:13:2.96:0,3,60	0/0:15,0:14:23.69:0,24,587	0/0:20,0:18:29.66:0,30,738	0/1:22,0:21:99:286,0,771	0/0:13,1:13:3.64:0,4,81	0/0:12,0:12:36.12:0,36,906	0/0:9,0:8:18.05:0,18,407	0/1:28,1:21:24.38:24,0,158	0/0:13,0:12:23.74:0,24,573	0/1:26,1:22:3.86:4,0,254	0/0:23,0:23:51.18:0,51,1285	0/0:25,0:23:54.41:0,54,1258	0/0:33,0:30:78.20:0,78,1950	0/1:17,0:7:99:203,0,176	0/1:17,0:15:99:243,0,445	1/1:7,3:10:3.85:22,4,0	0/0:21,1:16:3.48:0,3,81	0/1:15,1:16:60.91:61,0,142	0/0:8,0:8:15.05:0,15,373	0/0:46,0:43:86.97:0,87,2174	0/0:20,0:17:36.12:0,36,950	0/0:17,0:15:39.13:0,39,1044	0/1:14,0:12:96.46:96,0,223	0/0:15,0:13:30.04:0,30,746
chr10	89650516	.	GGAGA	G	3731.02	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=10.415;DP=409;FS=6.747;HRun=0;HaplotypeScore=92.6928;InbreedingCoeff=0.9316;MQ=74.43;MQ0=5;MQRankSum=-9.935;QD=37.69;ReadPosRankSum=-2.051;VQSLOD=2.9647;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.27:0,84,2163	0/0:3,0:3:6.02:0,6,158	0/0:34,0:25:29.98:0,30,1118	0/0:44,0:29:75.21:0,75,1779	1/1:1,5:6:12.04:219,12,0	0/0:13,0:13:36.12:0,36,916	0/0:20,0:20:54.15:0,54,1264	1/1:5,13:18:39.13:701,39,0	1/1:0,5:5:15.05:275,15,0	0/0:9,0:9:27.09:0,27,706	0/0:9,0:9:27.09:0,27,697	1/1:2,13:15:29.99:551,30,0	0/0:12,0:12:32.71:0,33,869	1/1:2,6:8:21.07:386,21,0	0/0:19,0:19:48.16:0,48,1259	0/0:15,0:15:45.15:0,45,1171	0/0:25,0:24:69.24:0,69,1817	1/1:1,8:8:18.06:331,18,0	1/1:4,2:6:6.02:110,6,0	1/1:0,5:5:9.03:166,9,0	1/1:3,9:10:23.98:440,24,0	1/1:2,9:11:18.06:331,18,0	0/0:9,0:9:24.05:0,24,633	0/0:32,0:32:87.30:0,87,2262	0/0:16,0:16:48.14:0,48,1200	0/0:14,0:14:39.13:0,39,1030	1/1:1,3:4:12.04:220,12,0	0/0:2,0:2:6.02:0,6,158
chr10	89658564	.	T	TG	639.95	PASS	AB=0.905;AC=20;AF=0.357;AN=56;BaseQRankSum=-1.234;DP=460;FS=1.562;HRun=11;HaplotypeScore=99.2786;InbreedingCoeff=0.4844;MQ=72.77;MQ0=0;MQRankSum=0.978;QD=3.28;ReadPosRankSum=-0.664;VQSLOD=0.5503;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:36.64:0,37,106	0/0:5,0:5:10.19:0,10,29	0/1:22,1:20:11.86:12,0,105	0/1:16,0:14:7.72:8,0,19	0/1:8,5:13:17.14:24,0,17	0/0:9,0:9:10.19:0,10,29	0/0:22,0:22:29.23:0,29,95	0/1:6,3:9:0:0,0,0	1/1:3,3:6:8.94:78,9,0	0/0:17,0:17:17.89:0,18,138	0/0:10,0:11:10.98:0,11,75	1/1:15,7:23:2.07:41,2,0	0/0:16,0:16:11.70:0,12,93	0/1:11,0:11:0:0,0,0	0/0:30,0:30:21.30:0,21,75	0/0:25,0:25:44.79:0,45,346	0/0:22,0:22:26.47:0,26,76	1/1:11,7:18:15.03:152,15,0	1/1:6,6:12:17.97:162,18,0	0/0:13,0:13:2.78:0,3,22	1/1:11,7:19:5.54:80,6,0	1/1:7,3:10:2.69:56,3,0	0/1:13,0:13:2.99:3,0,116	0/0:12,0:13:13.93:0,14,99	0/0:17,0:19:16.92:0,17,122	0/0:22,0:22:23.85:0,24,181	1/1:9,13:22:0.82:190,1,0	0/0:10,0:10:17.89:0,18,136
chr10	89658572	.	GGGGC	G	2126.47	PASS	AB=0.960;AC=11;AF=0.196;AN=56;BaseQRankSum=5.976;DP=406;FS=25.823;HRun=0;HaplotypeScore=77.3721;InbreedingCoeff=0.9029;MQ=76.35;MQ0=0;MQRankSum=-2.418;QD=18.17;ReadPosRankSum=7.209;VQSLOD=1.5375;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:33:57.14:913,57,0	1/1:0,6:6:15.05:237,15,0	0/0:21,0:19:51.06:0,51,862	0/0:15,0:14:25.86:0,26,299	0/0:11,0:11:23.86:0,24,338	1/1:13,0:13:29.58:186,30,0	1/1:19,1:20:7.48:165,7,0	0/0:11,0:11:18.04:0,18,242	0/0:5,0:5:11.99:0,12,184	0/0:13,0:13:35.88:0,36,633	0/0:10,0:10:21.04:0,21,383	0/0:16,0:16:20.96:0,21,356	0/0:11,0:11:21:0,21,442	0/0:10,0:10:24:0,24,415	0/1:23,1:24:0.85:136,0,1	0/0:22,0:22:60.10:0,60,1323	1/1:1,20:21:39.58:663,40,0	0/0:13,0:13:26.87:0,27,432	0/0:11,0:11:29.92:0,30,479	0/0:12,0:12:24.88:0,25,379	0/0:15,0:15:24.44:0,24,349	0/0:8,0:8:15.94:0,16,302	0/0:10,0:10:30.08:0,30,604	0/0:16,0:16:45.10:0,45,874	0/0:18,0:18:42.10:0,42,770	0/0:15,0:15:33.10:0,33,580	0/0:17,0:17:32.79:0,33,545	0/0:8,0:8:24.07:0,24,509
chr10	89658573	.	GGGC	G	2124.89	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.233;DP=409;FS=21.093;HRun=0;HaplotypeScore=71.7080;InbreedingCoeff=0.9770;MQ=78.14;MQ0=0;MQRankSum=-2.894;QD=18.32;ReadPosRankSum=6.761;VQSLOD=1.4021;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:56.94:489,57,0	1/1:6,0:6:15:132,15,0	0/0:22,0:20:41.09:0,41,628	0/0:17,0:15:22.33:0,22,214	0/0:12,0:12:20.75:0,21,250	1/1:10,4:14:36.02:396,36,0	1/1:5,15:20:39.12:555,39,0	0/0:15,0:15:29.81:0,30,276	0/0:5,0:5:10.28:0,10,128	0/0:13,0:13:32.83:0,33,482	0/0:10,0:10:20.99:0,21,301	0/0:14,0:14:20.95:0,21,282	0/0:9,0:9:21:0,21,354	0/0:10,0:10:24:0,24,342	1/1:5,19:24:29.75:398,30,0	0/0:22,0:22:60.10:0,60,1074	1/1:20,0:20:38.60:342,39,0	0/0:13,0:13:23.99:0,24,331	0/0:12,0:12:33.01:0,33,421	0/0:12,0:12:24.40:0,24,324	0/0:15,0:15:23.50:0,23,273	0/0:8,0:8:15.05:0,15,236	0/0:10,0:10:27.06:0,27,445	0/0:16,0:16:45.09:0,45,704	0/0:19,0:19:42.05:0,42,626	0/0:14,0:14:24.03:0,24,380	0/0:17,0:17:32.72:0,33,419	0/0:8,0:8:21.06:0,21,388
chr10	89659116	.	GGCAGAGACTCA	G	6946.37	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.169;DP=827;FS=8.892;HRun=0;HaplotypeScore=263.8771;InbreedingCoeff=0.9996;MQ=88.89;MQ0=0;MQRankSum=-13.092;QD=60.40;ReadPosRankSum=3.526;VQSLOD=2.9607;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,35:43:57.15:1941,57,0	1/1:1,12:13:33.05:1042,33,0	0/0:30,0:30:90.31:0,90,4111	0/0:37,0:37:99:0,99,4294	0/0:29,0:29:87.30:0,87,4608	0/0:29,0:29:87.30:0,87,4558	0/0:43,0:43:99:0,120,6134	0/0:29,0:29:84.28:0,84,4174	0/0:31,0:31:90.31:0,90,4698	0/0:23,0:23:69.24:0,69,3384	0/0:17,0:17:42.14:0,42,2366	0/0:33,0:33:99:0,99,5450	0/0:26,0:26:75.26:0,75,4002	0/0:33,0:33:96.33:0,96,5299	1/1:2,28:30:69.24:2440,69,0	0/0:34,0:34:99:0,99,5304	1/1:4,25:29:48.11:1524,48,0	0/0:28,0:28:84.25:0,84,4240	0/0:10,0:9:30.10:0,30,1376	0/0:20,0:20:54.19:0,54,2956	0/0:64,0:64:99:0,190,9737	0/0:31,0:31:87.27:0,87,4293	0/0:17,0:17:48.16:0,48,2533	0/0:55,0:55:99:0,160,8275	0/0:28,0:28:81.28:0,81,4288	0/0:25,0:25:69.24:0,69,3860	0/0:30,0:29:84.29:0,84,4526	0/0:10,0:10:30.10:0,30,1650
chr10	89660491	.	CT	C	2962.51	PASS	AB=0.778;AC=33;AF=0.589;AN=56;BaseQRankSum=8.401;DP=600;FS=2.815;HRun=13;HaplotypeScore=73.6371;InbreedingCoeff=0.6377;MQ=58.61;MQ0=6;MQRankSum=1.682;QD=7.04;ReadPosRankSum=4.334;VQSLOD=2.7238;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:40:23.13:103,23,0	1/1:2,0:13:12.68:36,13,0	0/1:15,0:5:0.45:14,0,0	0/0:12,0:6:7.30:0,7,42	0/1:9,20:30:5.45:271,0,5	1/1:4,0:6:8.40:23,8,0	1/1:4,0:18:19.36:55,19,0	0/1:20,19:38:29.25:286,0,29	1/1:4,19:23:12.63:255,13,0	0/0:28,0:28:44.37:0,44,412	0/0:22,1:23:17:0,17,373	1/1:7,12:19:20.64:236,21,0	0/0:7,0:7:17.98:0,18,165	1/1:5,16:22:52.70:377,53,0	1/1:3,0:23:25.99:76,26,0	0/0:17,2:19:26.14:0,26,405	1/1:10,0:45:41.97:137,42,0	1/1:13,16:30:17.70:275,18,0	1/1:9,22:29:65.87:432,66,0	0/1:7,9:16:58.65:105,0,59	1/1:3,0:2:5.97:44,6,0	1/1:4,6:10:17.86:131,18,0	0/0:22,1:23:10.12:0,10,335	0/0:16,0:17:35.88:0,36,330	0/0:25,2:27:24.56:0,25,514	0/0:23,0:23:65.80:0,66,598	1/1:5,20:25:41.74:306,42,0	0/1:9,0:9:6.68:7,0,151
chr10	89665825	.	TTTTTTTTTTTTTCC	T	2133.47	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.770;DP=548;FS=1.834;HRun=0;HaplotypeScore=176.7146;InbreedingCoeff=0.9277;MQ=50.21;MQ0=17;MQRankSum=-4.099;QD=73.57;ReadPosRankSum=7.017;VQSLOD=3.1341;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:25:65.81:0,66,2196	0/0:3,0:3:9.03:0,9,458	0/0:24,0:6:8.69:0,9,233	0/0:19,0:9:16.09:0,16,342	0/0:25,0:24:51.17:0,51,2047	1/1:1,14:15:39.13:1459,39,0	1/1:2,12:13:20.95:795,21,0	0/0:27,0:27:71.03:0,71,2790	0/0:18,0:17:39.13:0,39,1682	0/0:24,0:24:69.71:0,70,2932	0/0:19,0:19:54.19:0,54,2529	0/0:18,0:18:46.96:0,47,2085	0/0:11,0:10:24.08:0,24,1056	0/0:13,0:13:39.13:0,39,1863	0/0:24,0:22:51.18:0,51,2466	0/0:33,0:31:87.30:0,87,4177	0/0:11,0:11:19.95:0,20,723	0/0:21,0:20:57.19:0,57,2588	0/0:29,0:26:78.27:0,78,3461	0/0:11,0:10:24.08:0,24,1011	0/0:9,0:8:23.44:0,23,723	0/0:12,0:12:36.12:0,36,1946	0/0:18,0:18:45.15:0,45,1942	0/0:26,0:24:47.26:0,47,1617	0/0:23,0:22:47.53:0,48,2096	0/0:31,0:30:84.29:0,84,3439	0/0:19,0:18:54.17:0,54,2002	0/0:23,0:22:60.20:0,60,2303
chr10	89666805	.	T	TG	428.95	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.618;DP=742;FS=3.162;HRun=0;HaplotypeScore=76.1893;InbreedingCoeff=0.9703;MQ=58.52;MQ0=11;MQRankSum=-6.747;QD=9.13;ReadPosRankSum=-1.125;VQSLOD=3.4039;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1465	0/0:8,0:8:24.08:0,24,330	0/0:52,0:19:9.46:0,9,433	0/0:59,0:21:23.01:0,23,351	0/0:35,0:35:99:0,105,1380	1/1:13,10:23:40.59:318,41,0	1/1:20,4:21:33.49:232,33,0	0/0:27,0:27:76.42:0,76,914	0/0:14,0:14:36.10:0,36,469	0/0:28,0:28:70.79:0,71,1038	0/0:19,0:19:57.18:0,57,781	0/0:33,0:33:99:0,99,1302	0/0:18,0:18:51.16:0,51,689	0/0:21,0:21:63.10:0,63,788	0/0:22,0:22:66.19:0,66,876	0/0:25,0:25:69.20:0,69,917	0/0:40,0:40:99:0,112,1557	0/0:25,0:25:75.16:0,75,980	0/0:12,0:12:33.10:0,33,443	0/0:15,0:15:39.09:0,39,529	0/0:25,0:25:75.20:0,75,982	0/0:26,0:26:69.19:0,69,881	0/0:23,0:23:66.14:0,66,882	0/0:32,0:32:95.68:0,96,1305	0/0:19,0:19:57.17:0,57,763	0/0:40,0:40:99:0,120,1599	0/0:29,0:29:84.23:0,84,1107	0/0:11,0:11:30.09:0,30,401
chr10	89666806	.	T	TTTTGTTG	1934.44	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.124;DP=740;FS=10.204;HRun=0;HaplotypeScore=157.0773;InbreedingCoeff=0.9981;MQ=58.56;MQ0=11;MQRankSum=-8.539;QD=40.30;ReadPosRankSum=0.112;VQSLOD=2.4972;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,2570	0/0:8,0:8:24.08:0,24,589	0/0:51,0:18:45.97:0,46,906	0/0:58,0:21:41.91:0,42,713	0/0:36,0:36:99:0,102,2400	1/1:14,8:24:31.73:1081,32,0	1/1:20,1:21:41.19:975,41,0	0/0:25,0:25:69.20:0,69,1438	0/0:14,0:14:33.10:0,33,764	0/0:28,0:28:72.24:0,72,1668	0/0:19,0:19:54.19:0,54,1316	0/0:33,0:33:96.30:0,96,2245	0/0:18,0:18:54.15:0,54,1241	0/0:20,0:20:60.17:0,60,1317	0/0:22,0:22:63.20:0,63,1468	0/0:25,0:25:66.21:0,66,1538	0/0:40,0:40:99:0,120,2837	0/0:25,0:25:66.23:0,66,1623	0/0:11,0:11:30.10:0,30,743	0/0:15,0:15:42.13:0,42,952	0/0:25,0:25:69.23:0,69,1652	0/0:26,0:26:72.21:0,72,1545	0/0:23,0:23:66.21:0,66,1530	0/0:33,0:33:96.33:0,96,2316	0/0:19,0:19:54.19:0,54,1336	0/0:40,0:40:99:0,111,2636	0/0:29,0:29:81.23:0,81,1862	0/0:11,0:11:30.09:0,30,692
chr10	89667352	.	AGAG	A	3574.34	PASS	AB=0.648;AC=17;AF=0.315;AN=54;BaseQRankSum=0.211;DP=517;FS=19.729;HRun=0;HaplotypeScore=96.8287;InbreedingCoeff=0.5314;MQ=49.77;MQ0=15;MQRankSum=-2.107;QD=16.40;ReadPosRankSum=1.871;VQSLOD=1.9355;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:48.02:0,48,665	0/0:6,0:4:6.02:0,6,92	0/0:31,0:11:9.03:0,9,163	0/0:26,0:13:15.52:0,16,287	0/1:10,18:28:89.04:348,0,89	0/0:13,0:12:17.96:0,18,282	0/0:27,0:27:62.92:0,63,996	1/1:17,6:19:15.03:201,15,0	1/1:8,10:19:36.59:490,37,0	0/0:16,0:17:29.76:0,30,367	0/0:5,0:5:9.03:0,9,139	1/1:5,16:20:45.15:655,45,0	0/0:16,0:14:32.39:0,32,494	0/1:7,11:18:16.80:321,0,17	0/0:25,0:25:46.23:0,46,775	0/0:24,0:24:48.05:0,48,797	0/0:15,0:14:39.13:0,39,631	1/1:0,8:8:15.05:222,15,0	0/1:19,6:20:99:155,0,120	0/1:3,11:14:26.56:228,0,27	1/1:4,15:19:18.02:235,18,0	0/1:12,15:26:99:319,0,102	0/0:9,0:8:23.98:0,24,407	0/0:23,0:23:32.98:0,33,602	0/0:15,0:15:30.03:0,30,508	0/0:27,0:25:36.95:0,37,884	1/1:4,12:15:27.09:400,27,0	./.
chr10	89667388	.	A	AG	124.02	PASS	AC=12;AF=1.000;AN=12;DP=23;FS=0.000;HRun=0;HaplotypeScore=9.9511;MQ=35.56;MQ0=3;QD=10.33;VQSLOD=3.2016;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	1/1:0,6:6:5.94:45,6,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:36,3,0	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:45,3,0	1/1:2,0:2:3:25,3,0	1/1:1,0:1:2.98:21,3,0	1/1:1,0:1:2.97:20,3,0	./.	./.
chr10	89667457	.	GAT	G	101.90	PASS	AB=0.896;AC=21;AF=0.525;AN=40;BaseQRankSum=1.320;DP=106;FS=0.000;HRun=0;HaplotypeScore=73.6814;InbreedingCoeff=0.1913;MQ=45.53;MQ0=3;MQRankSum=1.529;QD=1.67;ReadPosRankSum=2.131;VQSLOD=1.4074;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:15,1:3:10.32:10,0,36	0/0:8,0:2:2.84:0,3,40	0/1:5,1:6:3.28:3,0,4	1/1:4,0:4:2.88:15,3,0	0/0:2,0:2:1.77:0,2,4	1/1:0,1:1:3.01:32,3,0	0/0:7,0:7:0.18:0,0,3	1/1:3,0:3:8.10:35,8,0	0/0:3,0:3:0.86:0,1,2	1/1:2,0:2:1.36:3,1,0	./.	0/0:3,1:3:1.26:0,1,4	./.	1/1:13,1:14:1.32:23,1,0	./.	1/1:2,0:2:0.47:1,0,0	1/1:0,1:1:3.01:30,3,0	./.	0/0:8,0:8:2.36:0,2,10	0/0:2,1:2:1.55:0,2,4	./.	./.	1/1:2,0:2:2.07:14,2,0	0/1:7,1:8:10.06:30,0,10	1/1:2,0:2:3.48:12,3,0	0/0:1,0:1:2.84:0,3,14
chr10	89667460	.	AGC	A	30.65	PASS	AB=0.918;AC=17;AF=0.425;AN=40;BaseQRankSum=0.683;DP=112;FS=0.000;HRun=0;HaplotypeScore=73.8683;InbreedingCoeff=0.2160;MQ=44.32;MQ0=5;MQRankSum=0.368;QD=0.65;ReadPosRankSum=0.242;VQSLOD=1.0372;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:20,0:3:8.60:0,9,81	0/0:10,0:2:3.83:0,4,46	0/1:5,1:6:4.22:5,0,4	1/1:4,0:4:2.88:15,3,0	0/0:2,0:2:5.49:0,5,24	1/1:1,0:1:2.80:13,3,0	0/0:6,1:7:11.63:0,12,63	1/1:3,0:3:1.52:17,2,0	0/0:2,1:3:0.88:0,1,2	1/1:0,2:2:5.31:26,5,0	./.	0/1:3,1:3:7.75:9,0,8	./.	0/1:13,1:14:3.19:6,0,3	./.	0/0:2,0:2:2.80:0,3,13	1/1:1,0:1:2.80:13,3,0	./.	0/0:8,0:8:2.36:0,2,10	0/0:3,0:2:4.05:0,4,13	./.	./.	1/1:2,0:2:2.12:15,2,0	0/1:8,0:8:12.89:23,0,13	0/1:2,0:2:3.03:5,0,3	0/0:1,0:1:2.80:0,3,13
chr10	89667477	.	G	GGGA	696.53	PASS	AB=0.952;AC=16;AF=0.286;AN=56;BaseQRankSum=8.508;DP=396;FS=79.265;HRun=0;HaplotypeScore=195.6343;InbreedingCoeff=-0.0903;MQ=32.70;MQ0=54;MQRankSum=-0.809;QD=3.43;ReadPosRankSum=4.275;VQSLOD=-0.3501;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,2:10:58.04:58,0,112	0/0:4,0:4:4.26:0,4,39	0/0:33,0:4:11.22:0,11,127	0/0:19,0:2:5.88:0,6,67	0/1:20,0:17:15.38:15,0,88	1/1:16,0:15:16.54:78,17,0	1/1:14,0:11:2.43:83,2,0	0/0:17,0:16:37.21:0,37,340	0/1:13,0:11:18.84:58,0,19	0/1:13,0:10:4.32:4,0,175	0/1:21,0:16:1.22:6,0,1	0/0:7,0:5:4.59:0,5,39	0/0:5,0:2:3.01:0,3,33	0/1:10,0:7:22.25:22,0,23	0/1:10,2:12:30.12:154,0,30	0/0:21,0:21:7.02:0,7,252	0/1:6,5:9:2.63:269,0,3	0/0:7,0:4:0.58:0,1,37	0/0:13,0:9:20.95:0,21,195	0/0:20,0:18:0.72:0,1,91	0/0:10,0:9:8.93:0,9,30	0/1:30,0:27:38.67:39,0,156	0/1:8,0:7:1.07:1,0,17	0/0:12,0:10:8.08:0,8,95	0/0:16,0:16:11.27:0,11,153	0/1:13,0:12:17.37:17,0,71	0/1:7,0:6:37.86:38,0,43	0/0:9,0:5:11.63:0,12,132
chr10	89667513	.	GA	G	162.02	PASS	AB=0.880;AC=9;AF=0.173;AN=52;BaseQRankSum=10.719;DP=457;FS=230.667;HRun=2;HaplotypeScore=207.8827;InbreedingCoeff=-0.2422;MQ=36.94;MQ0=59;MQRankSum=-7.768;QD=0.99;ReadPosRankSum=3.337;VQSLOD=-0.4917;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:16:11.12:0,11,441	0/0:8,0:8:17.64:0,18,172	./.	./.	0/0:22,0:18:3.16:0,3,427	0/1:28,1:28:8.64:9,0,419	0/1:15,1:13:40.61:41,0,121	0/0:20,0:7:21.03:0,21,265	0/1:10,7:17:66.59:67,0,261	0/0:19,0:16:45.09:0,45,594	0/0:20,1:17:4.95:0,5,407	0/0:10,0:7:14.08:0,14,194	0/0:10,0:7:21:0,21,231	0/1:13,2:13:20.89:21,0,259	0/0:20,0:20:33.32:0,33,354	0/0:20,1:22:14.79:0,15,291	0/0:17,0:15:19.01:0,19,286	0/0:12,1:10:0.24:0,0,233	0/0:15,0:12:33.11:0,33,449	0/1:19,1:16:28.54:29,0,356	0/0:10,0:9:10.88:0,11,170	0/1:32,2:32:63.96:64,0,508	0/1:8,1:6:22.37:22,0,57	0/0:21,0:20:37.28:0,37,467	0/0:19,3:20:22.08:0,22,565	0/1:14,2:13:30.17:30,0,320	0/1:5,1:6:12.91:13,0,129	0/0:17,0:14:28.94:0,29,439
chr10	89667969	.	CCTT	C	2243.94	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.572;DP=564;FS=1.926;HRun=0;HaplotypeScore=78.6036;InbreedingCoeff=0.9870;MQ=81.35;MQ0=0;MQRankSum=-2.267;QD=43.15;ReadPosRankSum=1.006;VQSLOD=4.9735;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.20:0,87,1844	0/0:6,0:6:18.06:0,18,429	0/0:22,0:22:65.95:0,66,1318	0/0:13,0:13:33.11:0,33,723	0/0:29,0:29:78.20:0,78,1762	1/1:0,23:23:57.11:987,57,0	1/1:0,29:29:78.18:1378,78,0	0/0:33,0:33:99:0,99,2009	0/0:18,0:18:54.15:0,54,1242	0/0:26,0:26:78.23:0,78,1775	0/0:10,0:10:27.09:0,27,662	0/0:23,0:23:69.24:0,69,1698	0/0:14,0:14:42.11:0,42,889	0/0:15,0:15:45.11:0,45,1052	0/0:39,0:39:99:0,117,2703	0/0:19,0:19:57.20:0,57,1407	0/0:18,0:18:48.13:0,48,1036	0/0:14,0:14:42.14:0,42,1006	0/0:19,0:19:57.17:0,57,1286	0/0:14,0:14:39.13:0,39,912	0/0:22,0:22:63.01:0,63,1388	0/0:16,0:16:48.14:0,48,1085	0/0:13,0:13:39.12:0,39,881	0/0:21,0:21:63.19:0,63,1452	0/0:12,0:12:36.12:0,36,887	0/0:27,0:27:81.26:0,81,1902	0/0:35,0:35:99:0,105,2348	0/0:5,0:5:15.05:0,15,369
chr10	89668175	.	G	GATGACAAAACCAGAGTTGAGTTCCTTTTAA	66265.33	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=4.539;DP=454;FS=8.505;HRun=0;HaplotypeScore=314.3694;InbreedingCoeff=0.9075;MQ=65.63;MQ0=0;MQRankSum=-15.512;QD=207.73;ReadPosRankSum=2.318;VQSLOD=3.4906;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,1:25:63.22:4858,63,0	1/1:7,0:7:18.06:1793,18,0	0/0:10,0:10:17.97:0,18,932	0/0:18,0:18:54.18:0,54,2290	1/1:19,1:23:63.17:4126,63,0	1/1:15,3:21:42.14:3485,42,0	1/1:13,0:12:36.08:2870,36,0	1/1:15,0:15:42.14:2590,42,0	1/1:19,1:26:60.68:6358,61,0	0/0:21,0:21:60.20:0,60,3879	0/0:12,0:12:33.09:0,33,1595	1/1:18,1:22:54.91:5219,55,0	0/0:14,0:14:42.14:0,42,3049	1/1:19,2:20:51.17:5130,51,0	1/1:24,5:30:87.30:7774,87,0	0/1:15,0:15:99:375,0,2362	1/1:20,0:20:54.19:4640,54,0	1/1:7,0:7:15.05:938,15,0	1/1:14,0:14:42.10:2556,42,0	1/1:12,2:16:42.11:3392,42,0	1/1:8,0:8:14.99:365,15,0	1/1:14,0:14:39.13:3501,39,0	0/0:13,0:13:36.11:0,36,1678	0/0:20,0:20:51.13:0,51,2764	0/0:7,0:7:21.07:0,21,1691	0/0:16,0:16:39.13:0,39,2244	1/1:20,1:21:63.22:6295,63,0	0/0:3,0:3:9.03:0,9,709
chr10	89669990	.	TTGTGTG	T	2971.95	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=4.606;DP=623;FS=2.448;HRun=0;HaplotypeScore=134.4848;InbreedingCoeff=0.7304;MQ=58.35;MQ0=15;MQRankSum=-5.558;QD=12.28;ReadPosRankSum=0.058;VQSLOD=3.0795;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:18:0,18,244	0/0:4,0:12:9.03:0,9,225	0/0:25,0:12:8.99:0,9,90	0/0:33,0:19:3:0,3,28	1/1:4,5:9:0.21:124,0,0	0/1:17,0:17:0.60:1,0,377	0/1:14,0:14:22.69:23,0,219	1/1:11,5:16:5.72:111,6,0	1/1:3,14:19:21.07:393,21,0	0/0:17,0:22:49.49:0,49,791	0/0:8,0:8:15.02:0,15,287	1/1:11,28:41:42.35:934,42,0	0/0:20,0:24:32.55:0,33,511	1/1:5,21:27:29.04:525,29,0	0/0:3,0:28:18.06:0,18,355	0/0:23,0:25:46.55:0,47,1227	0/0:36,0:36:48:0,48,834	1/1:19,14:34:18.04:343,18,0	1/1:17,0:17:7.08:104,7,0	1/1:5,4:9:8.97:132,9,0	0/0:24,14:38:2.37:0,2,13	1/1:10,14:23:17.85:238,18,0	0/0:11,0:12:27.56:0,28,708	0/0:38,0:39:31.68:0,32,1644	0/0:6,0:9:18.06:0,18,507	0/0:28,0:28:45.75:0,46,1006	1/1:5,7:13:15.05:241,15,0	0/0:8,0:8:21.05:0,21,511
chr10	89670023	.	T	TGC	80.74	PASS	AB=0.951;AC=7;AF=0.125;AN=56;BaseQRankSum=6.574;DP=545;FS=12.783;HRun=0;HaplotypeScore=98.7784;InbreedingCoeff=-0.1264;MQ=55.91;MQ0=10;MQRankSum=-3.862;QD=0.59;ReadPosRankSum=3.583;VQSLOD=1.0226;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,13:30:15.33:144,0,15	0/0:11,0:10:11.56:0,12,119	0/0:10,0:3:5.24:0,5,35	0/0:18,0:8:10.25:0,10,77	0/1:9,0:9:7.22:7,0,121	0/1:19,0:19:16.38:16,0,18	0/0:21,0:21:11.41:0,11,91	0/0:17,0:17:10.01:0,10,276	0/0:20,0:20:21.33:0,21,195	0/0:20,0:20:15.09:0,15,493	0/0:8,0:7:15.02:0,15,181	0/0:42,0:41:49.95:0,50,447	0/1:15,0:15:5.88:6,0,280	0/1:24,0:24:0.01:0,0,130	0/0:27,0:26:5.74:0,6,185	0/0:20,0:20:58.64:0,59,720	0/1:30,0:30:9.77:10,0,165	0/0:25,0:25:30.80:0,31,306	0/0:19,0:19:37.13:0,37,311	0/1:10,0:10:2.54:3,0,123	0/0:29,0:27:6.81:0,7,111	0/0:23,0:22:38.38:0,38,288	0/0:11,0:11:9.72:0,10,338	0/0:34,0:34:58.06:0,58,1024	0/0:15,0:14:29.95:0,30,338	0/0:22,0:22:60.28:0,60,623	0/0:8,0:8:9.88:0,10,69	0/0:7,0:7:21.04:0,21,279
chr10	89670027	.	CGT	C	66.98	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=3.494;DP=553;FS=2.038;HRun=0;HaplotypeScore=94.2532;InbreedingCoeff=0.7374;MQ=58.59;MQ0=7;MQRankSum=-1.701;QD=1.40;ReadPosRankSum=-2.304;VQSLOD=1.3950;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:29.46:0,29,378	0/0:10,0:9:14.84:0,15,222	0/1:8,0:3:3.37:3,0,33	0/0:18,0:10:11.88:0,12,99	0/0:10,0:10:26.92:0,27,308	1/1:18,0:18:8.65:49,9,0	1/1:2,20:22:10.68:124,11,0	0/0:18,0:18:37.90:0,38,648	0/0:20,0:20:29.47:0,29,261	0/0:24,0:24:59.96:0,60,805	0/0:6,0:5:15.02:0,15,208	0/0:42,0:41:46.78:0,47,565	0/0:16,0:16:30.35:0,30,414	0/0:23,0:23:17.65:0,18,166	0/0:28,0:27:35.90:0,36,474	0/0:20,0:20:59.73:0,60,897	0/0:31,0:31:53.58:0,54,673	0/0:25,0:25:53.54:0,54,629	0/0:22,0:22:45.84:0,46,780	0/0:10,0:10:23.61:0,24,310	0/0:30,0:28:23.72:0,24,281	0/0:23,0:22:32.50:0,32,462	0/0:11,0:11:12.06:0,12,322	0/0:36,0:36:99:0,103,1573	0/0:16,0:15:35.83:0,36,505	0/0:18,0:18:41.65:0,42,636	0/0:8,0:8:14.41:0,14,105	0/0:7,0:7:21.07:0,21,380
chr10	89670029	.	T	TGC	54.78	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.568;DP=547;FS=0.000;HRun=0;HaplotypeScore=96.1851;InbreedingCoeff=0.6392;MQ=59.47;MQ0=6;MQRankSum=1.820;QD=1.34;ReadPosRankSum=-0.967;VQSLOD=1.7159;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:30.02:0,30,325	0/0:10,0:9:12.04:0,12,158	0/0:9,0:4:0.22:0,0,35	0/0:19,0:11:14.31:0,14,142	0/0:10,0:10:26.80:0,27,291	1/1:3,15:18:7.14:104,7,0	1/1:23,0:23:0.87:47,1,0	0/0:18,0:18:39.12:0,39,501	0/0:21,0:21:33.03:0,33,391	0/0:25,0:25:57.16:0,57,703	0/0:6,0:5:9.03:0,9,118	0/0:40,0:39:75.01:0,75,892	0/0:13,0:13:24.08:0,24,312	0/0:22,0:22:30.02:0,30,323	0/0:28,0:27:32.89:0,33,381	0/0:20,0:20:48.10:0,48,629	0/0:28,0:28:45.08:0,45,526	0/0:25,0:25:54.17:0,54,689	0/0:22,0:22:54.07:0,54,656	0/0:10,0:10:23.94:0,24,262	0/0:29,0:28:24.05:0,24,284	0/0:22,0:21:45.12:0,45,548	0/0:7,0:7:15.03:0,15,182	0/0:36,0:36:90.25:0,90,1146	0/0:16,0:15:30.08:0,30,379	0/0:21,0:21:42.03:0,42,502	0/0:8,0:8:15.03:0,15,181	0/0:7,0:7:21.07:0,21,275
chr10	89671633	.	A	AGG	1265.19	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.500;DP=450;FS=0.000;HRun=5;HaplotypeScore=64.4431;InbreedingCoeff=0.8373;MQ=65.62;MQ0=21;MQRankSum=0.818;QD=36.15;ReadPosRankSum=1.391;VQSLOD=3.0802;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:39.08:0,39,478	0/0:8,0:8:18.06:0,18,229	0/0:27,0:13:18.29:0,18,138	0/0:21,0:9:2.53:0,3,50	0/0:22,0:22:47.99:0,48,576	1/1:3,22:26:66.22:1082,66,0	1/1:1,7:8:18.06:302,18,0	0/0:19,0:17:38.56:0,39,433	0/0:15,0:14:24.07:0,24,296	0/0:15,0:15:39.12:0,39,494	0/0:13,0:13:30.10:0,30,381	0/0:15,0:15:39.12:0,39,488	0/0:10,0:10:18.04:0,18,215	0/0:11,0:11:23.88:0,24,284	0/0:15,0:15:30.10:0,30,382	0/0:24,0:22:63.17:0,63,770	0/0:21,0:20:42.05:0,42,501	0/0:17,0:14:33.06:0,33,420	0/0:18,0:13:33.08:0,33,389	0/0:19,0:19:53.95:0,54,631	0/0:7,0:6:12.04:0,12,153	0/0:11,0:11:27.08:0,27,331	0/0:14,0:14:39.11:0,39,471	0/0:17,0:16:39.12:0,39,496	0/0:12,0:12:24.05:0,24,285	0/0:23,0:22:60.16:0,60,744	0/0:19,0:18:48.02:0,48,603	0/0:2,0:2:6.02:0,6,76
chr10	89676815	.	G	GCGCT	1700.43	PASS	AB=1.000;AC=26;AF=0.481;AN=54;BaseQRankSum=2.866;DP=456;FS=31.765;HRun=0;HaplotypeScore=108.5324;InbreedingCoeff=0.5435;MQ=70.89;MQ0=14;MQRankSum=-2.209;QD=6.86;ReadPosRankSum=-3.488;VQSLOD=0.0812;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:25:99:113,0,142	0/1:3,0:3:12.93:13,0,19	0/0:21,0:15:38.22:0,38,415	0/0:30,0:18:25.40:0,25,216	1/1:14,0:14:11.93:90,12,0	0/0:19,0:19:20.76:0,21,173	0/0:16,0:16:17.15:0,17,136	1/1:35,0:33:38.46:298,38,0	1/1:1,9:11:3.01:60,3,0	0/0:17,0:16:15.53:0,16,150	0/0:4,0:4:3:0,3,25	1/1:12,0:12:27.28:206,27,0	0/1:12,0:12:9.55:10,0,194	1/1:16,0:15:19.55:156,20,0	0/0:10,0:9:14.86:0,15,123	0/0:17,0:17:35.40:0,35,301	0/0:13,0:10:23.26:0,23,169	1/1:21,0:21:50.24:338,50,0	1/1:17,0:16:21.70:153,22,0	1/1:8,0:8:3:26,3,0	1/1:30,0:29:18.81:250,19,0	1/1:5,0:5:3:25,3,0	./.	0/0:16,0:16:6.81:0,7,198	0/0:17,0:15:5.92:0,6,41	0/1:19,0:19:68.66:69,0,137	1/1:18,0:18:1.81:87,2,0	0/0:23,0:22:59.53:0,60,469
chr10	89678556	.	TA	T	876.69	PASS	AB=0.780;AC=13;AF=0.232;AN=56;BaseQRankSum=2.754;DP=423;FS=0.526;HRun=14;HaplotypeScore=56.8918;InbreedingCoeff=0.4839;MQ=67.15;MQ0=7;MQRankSum=-0.072;QD=7.01;ReadPosRankSum=2.919;VQSLOD=2.3737;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,20:28:46.66:314,47,0	1/1:1,1:2:2.96:21,3,0	0/0:17,0:5:11.06:0,11,65	0/0:20,0:10:11.22:0,11,55	0/1:14,2:18:3.14:3,0,207	0/1:3,7:10:9.97:85,0,10	1/1:2,7:10:19.62:129,20,0	0/0:18,0:13:24.03:0,24,222	0/0:11,0:11:24.01:0,24,217	0/0:13,0:13:21.90:0,22,194	0/0:11,0:11:16.22:0,16,212	0/0:13,0:14:29.63:0,30,260	0/1:6,0:6:8.31:8,0,22	0/0:9,0:9:11.95:0,12,97	1/1:10,6:16:32.62:213,33,0	0/0:23,1:25:42.29:0,42,508	0/1:8,21:28:1.73:256,0,2	0/0:30,0:29:47.84:0,48,399	0/0:18,1:21:0.77:0,1,177	0/0:12,0:11:17.97:0,18,152	0/0:8,0:8:9.57:0,10,102	0/0:7,0:7:9.01:0,9,84	0/1:4,1:5:11.58:12,0,43	0/0:11,0:11:27:0,27,242	0/0:10,1:12:12.16:0,12,230	0/0:18,0:19:22.45:0,22,325	0/0:12,1:16:29.80:0,30,257	0/0:19,0:19:44.97:0,45,407
chr10	89678673	.	GA	G	610.57	PASS	AB=0.902;AC=13;AF=0.232;AN=56;BaseQRankSum=2.814;DP=572;FS=0.000;HRun=14;HaplotypeScore=66.0159;InbreedingCoeff=0.4310;MQ=51.62;MQ0=38;MQRankSum=-0.836;QD=2.94;ReadPosRankSum=2.880;VQSLOD=-0.7473;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,27:40:19.29:220,19,0	0/1:6,5:8:10.22:69,0,10	0/1:33,0:8:6.86:7,0,43	0/0:29,0:7:3.83:0,4,31	0/0:26,0:25:5.24:0,5,324	1/1:7,0:16:16.96:58,17,0	0/1:19,0:20:7.99:8,0,8	0/0:36,0:33:8.30:0,8,445	0/0:17,0:15:26.05:0,26,224	0/0:18,0:16:8.34:0,8,165	0/0:25,0:25:13.54:0,14,245	0/0:13,0:13:11.98:0,12,176	0/0:7,0:7:3:0,3,28	0/1:16,0:13:16.60:17,0,98	1/1:9,10:17:12.56:84,13,0	0/0:17,0:14:35.35:0,35,297	1/1:19,8:24:50.27:311,50,0	0/0:29,0:23:7.78:0,8,221	0/0:25,0:20:15.99:0,16,246	0/0:26,0:26:44.43:0,44,350	0/0:12,0:7:16.26:0,16,142	0/0:8,0:7:6.48:0,6,57	0/0:9,0:9:17.89:0,18,145	0/0:17,0:14:23.93:0,24,205	0/1:15,1:15:3.70:4,0,206	0/0:19,0:17:27.85:0,28,237	0/0:13,0:11:14.69:0,15,121	0/0:15,1:14:7.66:0,8,209
chr10	89678806	.	C	CTTTGG	6880.72	PASS	AC=26;AF=0.520;AN=50;BaseQRankSum=-8.449;DP=581;FS=7.785;HRun=0;HaplotypeScore=98.7404;InbreedingCoeff=0.9140;MQ=70.53;MQ0=4;MQRankSum=1.600;QD=28.08;ReadPosRankSum=-1.019;VQSLOD=3.5096;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:30.09:0,30,490	1/1:5,4:9:15.05:404,15,0	./.	./.	1/1:12,7:19:19.42:453,19,0	0/0:23,0:23:18.04:0,18,284	0/0:29,0:29:24.07:0,24,393	./.	1/1:2,8:11:18.06:496,18,0	0/0:22,0:21:21.06:0,21,336	0/0:17,0:17:12.03:0,12,185	1/1:6,5:11:12.04:331,12,0	0/0:15,0:15:18.06:0,18,307	1/1:9,10:18:21.07:578,21,0	1/1:13,15:28:30.10:826,30,0	0/0:11,0:11:6.02:0,6,102	1/1:20,12:32:39.13:1068,39,0	1/1:19,12:34:33.11:875,33,0	1/1:8,5:13:15.04:356,15,0	1/1:12,4:16:9.03:245,9,0	1/1:11,5:17:13.29:334,13,0	1/1:11,2:13:11.99:257,12,0	0/0:9,0:9:3.01:0,3,53	0/0:33,0:33:45.15:0,45,778	0/0:7,0:7:12.04:0,12,210	0/0:20,0:20:30.09:0,30,497	1/1:12,9:21:24.08:660,24,0	0/0:25,0:25:27.09:0,27,466
chr10	89679176	.	C	CA	1796.86	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.314;DP=793;FS=18.531;HRun=0;HaplotypeScore=75.1983;InbreedingCoeff=0.9983;MQ=90.19;MQ0=0;MQRankSum=-1.393;QD=40.84;ReadPosRankSum=0.189;VQSLOD=1.8328;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,1996	0/0:10,0:10:30.10:0,30,419	0/0:31,0:31:87.28:0,87,1185	0/0:30,0:30:90.19:0,90,1171	0/0:30,0:30:84.24:0,84,1120	1/1:0,25:25:69.24:1103,69,0	1/1:0,19:19:51.17:815,51,0	0/0:40,0:40:99:0,108,1481	0/0:38,0:38:99:0,114,1543	0/0:27,0:27:81.27:0,81,1129	0/0:22,0:22:66.22:0,66,923	0/0:42,0:42:99:0,126,1741	0/0:28,0:28:84.27:0,84,1158	0/0:32,0:32:96.28:0,96,1287	0/0:45,0:45:99:0,135,1871	0/0:24,0:24:72.23:0,72,990	0/0:30,0:30:90.30:0,90,1257	0/0:20,0:20:60.20:0,60,835	0/0:23,0:23:66.22:0,66,923	0/0:13,0:13:35.28:0,35,452	0/0:53,0:53:99:0,159,2167	0/0:21,0:21:63.20:0,63,864	0/0:21,0:21:60.19:0,60,821	0/0:37,0:37:99:0,111,1520	0/0:11,0:11:30.10:0,30,420	0/0:26,0:26:75.24:0,75,1032	0/0:38,0:38:99:0,114,1594	0/0:8,0:8:24.04:0,24,283
chr10	89681278	.	AAGTATAT	A	2402.72	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.217;DP=618;FS=0.000;HRun=0;HaplotypeScore=142.7519;InbreedingCoeff=0.9955;MQ=90.48;MQ0=0;MQRankSum=-8.532;QD=54.61;ReadPosRankSum=1.008;VQSLOD=3.7349;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.03:0,93,3172	0/0:7,0:7:18.04:0,18,599	0/0:26,0:26:63.69:0,64,2326	0/0:26,0:26:46.50:0,47,1719	0/0:12,0:12:33.11:0,33,1267	1/1:2,16:18:48.16:1264,48,0	1/1:1,25:26:48.16:1260,48,0	0/0:27,0:27:81.17:0,81,2652	0/0:27,0:27:81.23:0,81,2904	0/0:19,0:18:57.17:0,57,2009	0/0:14,0:14:42.13:0,42,1516	0/0:30,0:30:87.30:0,87,3300	0/0:19,0:19:54.15:0,54,1943	0/0:19,0:19:57.20:0,57,2285	0/0:28,0:28:81.23:0,81,3167	0/0:45,0:45:99:0,129,4760	0/0:19,0:19:51.15:0,51,1960	0/0:27,0:27:81.26:0,81,3098	0/0:22,0:22:63.19:0,63,2157	0/0:19,0:19:51.16:0,51,1962	0/0:34,0:34:96.32:0,96,3709	0/0:16,0:16:42.13:0,42,1597	0/0:12,0:12:36.08:0,36,1257	0/0:28,0:28:81.21:0,81,2822	0/0:11,0:11:33.10:0,33,1237	0/0:18,0:18:54.18:0,54,2059	0/0:19,0:19:57.20:0,57,2280	0/0:19,0:19:57.12:0,57,1902
chr10	89681351	.	GAC	G	2299.29	PASS	AB=0.803;AC=29;AF=0.558;AN=52;BaseQRankSum=9.225;DP=612;FS=14.112;HRun=0;HaplotypeScore=97.1712;InbreedingCoeff=0.7110;MQ=65.60;MQ0=5;MQRankSum=-4.484;QD=6.65;ReadPosRankSum=0.278;VQSLOD=2.4175;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:35:14.20:70,14,0	1/1:2,0:7:11.36:56,11,0	./.	./.	1/1:14,5:20:8.86:81,9,0	0/0:15,0:17:27:0,27,244	0/0:21,0:25:30.03:0,30,330	1/1:18,5:23:3.77:114,4,0	1/1:6,8:15:20.89:214,21,0	0/0:22,0:22:24.03:0,24,271	0/0:22,1:24:2.78:0,3,374	0/1:15,7:22:46.69:265,0,47	0/1:20,1:21:0.23:0,0,360	1/1:11,8:22:26.57:242,27,0	1/1:12,0:35:65.34:322,65,0	0/0:34,0:35:63.20:0,63,930	1/1:8,0:14:11.02:51,11,0	0/1:14,8:25:24.88:121,0,25	1/1:15,2:20:8.82:90,9,0	1/1:8,13:21:30.04:318,30,0	1/1:18,8:28:23.73:227,24,0	1/1:10,4:14:9.02:100,9,0	0/0:13,0:13:18.06:0,18,268	0/0:32,1:33:23.46:0,23,708	0/0:29,1:30:23.80:0,24,626	0/0:16,0:16:21.04:0,21,259	1/1:10,10:21:23.73:228,24,0	0/0:12,0:13:24.05:0,24,320
chr10	89681633	.	GTCTA	G	3490.07	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.861;DP=804;FS=5.176;HRun=0;HaplotypeScore=123.9330;InbreedingCoeff=0.9964;MQ=60.40;MQ0=10;MQRankSum=3.491;QD=22.81;ReadPosRankSum=3.956;VQSLOD=3.2337;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,31:38:51.17:844,51,0	1/1:3,12:15:27.09:457,27,0	0/0:45,0:30:39.43:0,39,660	0/0:35,0:21:36.10:0,36,577	0/0:33,0:33:78.24:0,78,1681	1/1:3,21:24:36.12:611,36,0	1/1:4,9:13:15.05:254,15,0	0/0:28,0:28:66.18:0,66,1244	0/0:33,0:33:81.21:0,81,1709	0/0:41,0:40:99:0,99,2047	0/0:17,0:17:45.14:0,45,1017	0/0:27,0:27:75.21:0,75,1610	0/0:31,0:31:81.17:0,81,1652	0/0:22,0:22:51.17:0,51,1131	1/1:7,29:32:45.15:762,45,0	0/0:30,0:30:75.19:0,75,1550	1/1:4,22:26:33.89:562,34,0	0/0:24,0:23:57.46:0,57,1186	0/0:27,0:25:44.99:0,45,876	0/0:30,0:30:78.23:0,78,1704	0/0:30,0:30:72.20:0,72,1565	0/0:26,0:26:66.18:0,66,1476	0/0:19,0:19:51.14:0,51,1067	0/0:34,0:34:93.27:0,93,1996	0/0:27,0:27:72.18:0,72,1507	0/0:37,0:37:99:0,102,2314	0/0:34,0:34:75.24:0,75,1697	0/0:21,0:21:33.10:0,33,681
chr10	89682141	.	A	ACAGAGCATGAATCCC	57739.53	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-6.812;DP=741;FS=4.510;HRun=0;HaplotypeScore=233.1118;InbreedingCoeff=0.9211;MQ=77.14;MQ0=0;MQRankSum=-18.999;QD=114.34;ReadPosRankSum=-0.288;VQSLOD=4.4939;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,13:33:57.20:3783,57,0	1/1:2,3:8:15.05:1110,15,0	0/0:22,0:22:54.17:0,54,1833	0/0:25,0:25:66.23:0,66,2119	1/1:5,13:28:48.16:2521,48,0	1/1:6,10:24:36.12:2496,36,0	1/1:14,7:40:57.20:2906,57,0	1/1:24,3:39:96.32:4923,96,0	1/1:14,14:30:81.28:5108,81,0	0/0:28,0:28:81.27:0,81,3345	0/0:15,0:15:45.15:0,45,1777	1/1:9,23:40:93.32:6762,93,0	0/0:33,0:33:99:0,99,4134	1/1:10,17:36:72.25:5064,72,0	1/1:8,17:35:75.21:4889,75,0	0/1:30,0:30:40.66:41,0,3097	1/1:6,8:23:36.12:2490,36,0	1/1:7,3:17:27.09:1682,27,0	1/1:9,3:23:66.23:3316,66,0	1/1:9,5:21:48.08:2109,48,0	1/1:11,6:28:30.03:1524,30,0	1/1:3,10:18:42.14:2757,42,0	0/0:21,0:21:57.18:0,57,2328	0/0:38,0:38:99:0,108,3885	0/0:16,0:16:48.16:0,48,2141	0/0:29,0:29:84.29:0,84,3614	1/1:11,9:32:66.23:4260,66,0	0/0:9,0:9:27.09:0,27,1162
chr10	89682818	.	A	AATGG	11124.70	PASS	AB=0.651;AC=26;AF=0.464;AN=56;BaseQRankSum=-12.765;DP=757;FS=5.697;HRun=0;HaplotypeScore=108.8491;InbreedingCoeff=0.7423;MQ=59.04;MQ0=10;MQRankSum=1.662;QD=26.61;ReadPosRankSum=0.862;VQSLOD=4.0721;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,19:39:43.33:1017,0,43	1/1:2,6:8:18.06:393,18,0	0/0:40,0:22:9:0,9,107	0/0:41,0:28:17.82:0,18,203	0/1:8,10:21:11.25:610,0,11	0/0:10,0:21:24.03:0,24,223	0/0:16,0:39:39.04:0,39,363	1/1:38,0:33:15.05:204,15,0	1/1:18,18:36:57.19:1289,57,0	0/0:21,0:21:33.09:0,33,458	0/0:12,0:12:20.64:0,21,306	1/1:16,14:31:27.09:640,27,0	0/0:19,0:19:21.05:0,21,287	1/1:7,13:22:24.08:555,24,0	0/1:13,18:31:2.09:953,0,2	0/0:27,0:27:48.15:0,48,733	1/1:15,23:38:45.15:1069,45,0	1/1:6,17:25:25.56:581,26,0	1/1:14,8:22:27.06:568,27,0	0/1:9,8:17:5.52:582,0,6	1/1:24,24:50:48.16:1135,48,0	1/1:6,15:21:45.15:1032,45,0	0/0:16,0:16:39.06:0,39,497	0/0:43,0:43:57.17:0,57,853	0/0:28,0:28:59.94:0,60,910	0/0:21,0:21:45.15:0,45,688	1/1:6,8:16:20.95:499,21,0	0/0:10,0:10:12.04:0,12,189
chr10	89685145	.	T	TC	6348.70	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-15.600;DP=698;FS=1.950;HRun=2;HaplotypeScore=63.5856;InbreedingCoeff=0.9977;MQ=91.20;MQ0=0;MQRankSum=-5.348;QD=36.07;ReadPosRankSum=0.549;VQSLOD=5.3072;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,51:57:99:1899,132,0	1/1:0,6:6:18.06:259,18,0	0/0:22,0:22:60.19:0,60,744	0/0:33,0:33:96.12:0,96,1132	0/0:12,0:12:36.10:0,36,434	1/1:0,19:19:57.19:821,57,0	1/1:6,26:32:66.22:951,66,0	0/0:25,0:25:69.21:0,69,845	0/0:32,0:32:93.27:0,93,1125	0/0:24,0:24:66.21:0,66,818	0/0:9,0:9:24.08:0,24,297	0/0:41,0:41:99:0,120,1487	0/0:35,0:35:99:0,105,1301	0/0:17,0:17:48.15:0,48,594	1/1:0,39:39:99:1555,108,0	0/0:23,0:23:60.17:0,60,731	1/1:2,21:23:60.20:864,60,0	0/0:24,0:24:72.18:0,72,875	0/0:21,0:21:60.19:0,60,743	0/0:16,0:16:48.14:0,48,583	0/0:31,0:31:87.24:0,87,1052	0/0:20,0:20:57.17:0,57,693	0/0:24,0:24:72.21:0,72,880	0/0:32,0:32:93.29:0,93,1153	0/0:21,0:21:63.20:0,63,781	0/0:22,0:22:63.20:0,63,781	0/0:26,0:26:78.23:0,78,953	0/0:12,0:12:27.08:0,27,335
chr10	89686526	.	TGGGG	T	1299.79	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=3.175;DP=529;FS=30.350;HRun=7;HaplotypeScore=106.1603;InbreedingCoeff=0.9753;MQ=75.89;MQ0=6;MQRankSum=-9.921;QD=22.03;ReadPosRankSum=3.455;VQSLOD=-0.3530;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:18.06:305,18,0	1/1:0,5:4:9.03:159,9,0	0/0:45,0:24:56.25:0,56,1011	0/0:33,0:21:39.11:0,39,888	0/0:22,0:23:66.22:0,66,958	1/1:0,0:14:29.62:132,30,0	1/1:0,0:8:10.07:39,10,0	0/0:25,0:25:57.14:0,57,787	0/0:30,0:30:78.27:0,78,1914	0/0:21,0:21:63.20:0,63,1413	0/0:16,0:16:39.13:0,39,925	0/0:14,0:15:27.09:0,27,388	0/0:17,0:17:51.17:0,51,1147	0/0:15,0:17:34.64:0,35,436	1/1:0,10:10:27.09:476,27,0	0/0:23,0:23:69.24:0,69,1713	1/1:0,11:11:21.07:371,21,0	0/0:17,0:17:42.14:0,42,624	0/0:21,0:23:51.15:0,51,704	0/0:12,0:12:34.34:0,34,460	0/0:21,0:22:59.86:0,60,789	0/0:18,0:19:48.15:0,48,701	0/0:15,0:15:45.15:0,45,1084	0/0:17,0:17:51.17:0,51,1189	0/0:19,0:19:51.17:0,51,1229	0/0:20,0:20:57.20:0,57,1372	0/0:26,0:26:66.21:0,66,970	0/0:14,0:14:39.13:0,39,960
chr10	89688889	.	G	GTT	2766.04	PASS	AB=0.963;AC=14;AF=0.250;AN=56;BaseQRankSum=-2.735;DP=578;FS=6.765;HRun=9;HaplotypeScore=74.6867;InbreedingCoeff=0.7707;MQ=69.58;MQ0=0;MQRankSum=2.289;QD=15.37;ReadPosRankSum=0.671;VQSLOD=1.4640;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,28:37:71.69:1044,72,0	1/1:0,7:7:12.04:185,12,0	0/1:18,0:16:15.99:16,0,178	0/0:9,0:9:7.99:0,8,103	0/0:17,0:18:48.12:0,48,511	1/1:4,0:31:52.40:180,52,0	1/1:4,0:12:14.97:51,15,0	0/0:28,0:28:66.10:0,66,684	0/0:19,0:19:57.13:0,57,598	0/0:27,0:27:72.16:0,72,766	0/0:13,0:13:33.01:0,33,318	0/0:17,0:17:48.10:0,48,503	0/0:21,0:22:51.05:0,51,589	0/0:15,0:16:45.57:0,46,471	1/1:3,23:31:66.07:917,66,0	0/0:23,0:23:63.13:0,63,670	1/1:2,14:17:9.70:531,10,0	0/1:23,2:25:29.36:29,0,508	0/0:28,0:28:57.02:0,57,577	0/0:22,0:22:52.29:0,52,524	0/0:22,0:22:63.14:0,63,662	0/0:4,0:4:9.02:0,9,96	0/0:11,0:11:30.07:0,30,319	0/0:17,0:16:45.11:0,45,479	0/0:24,0:24:63.15:0,63,670	0/0:31,0:31:93.23:0,93,988	0/0:30,0:30:90.20:0,90,947	0/0:17,0:17:32.52:0,33,374
chr10	89689223	.	CTG	C	1007.68	PASS	AB=0.904;AC=22;AF=0.407;AN=54;BaseQRankSum=6.274;DP=536;FS=0.693;HRun=0;HaplotypeScore=65.0101;InbreedingCoeff=-0.3029;MQ=66.23;MQ0=13;MQRankSum=1.592;QD=3.11;ReadPosRankSum=1.349;VQSLOD=1.6663;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:32:15.01:0,15,150	1/1:4,1:6:8.85:75,9,0	0/0:37,0:22:0.47:0,0,1	./.	0/1:23,2:25:11.64:12,0,247	0/1:15,2:16:77.11:77,0,138	0/1:16,1:18:60.59:61,0,111	0/1:34,0:32:22.55:23,0,59	0/1:11,1:11:14.68:15,0,179	0/0:16,0:16:4.25:0,4,33	0/1:17,2:20:61.55:62,0,92	0/1:15,1:15:60.56:61,0,235	0/1:16,1:17:20.69:21,0,122	0/1:10,2:13:52.51:53,0,196	1/1:8,4:15:17.71:159,18,0	0/0:15,0:15:24.06:0,24,335	1/1:10,5:19:23.56:206,24,0	0/1:15,2:18:71.05:71,0,172	0/1:20,2:19:47.42:47,0,161	0/1:10,0:10:20.71:21,0,101	0/1:17,0:17:23.61:24,0,41	0/1:11,2:13:14.67:15,0,206	0/0:15,0:15:0.19:0,0,101	0/1:13,6:19:99:138,0,131	0/1:10,1:12:31.85:32,0,100	0/0:17,0:16:9.02:0,9,117	0/0:17,0:16:12.04:0,12,179	0/0:17,0:17:15.01:0,15,175
chr10	89690272	.	A	AACAAAAAACAAAAAAC	1966.70	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=6.450;DP=528;FS=0.000;HRun=0;HaplotypeScore=240.7741;InbreedingCoeff=0.4108;MQ=72.36;MQ0=5;MQRankSum=-8.351;QD=17.25;ReadPosRankSum=2.714;VQSLOD=2.4167;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:23:99:191,0,117	0/1:8,0:8:52.02:60,0,52	0/0:35,0:18:12.55:0,13,238	0/0:26,0:17:32.70:0,33,403	0/0:21,0:21:54:0,54,1078	1/1:4,12:22:14.01:629,14,0	1/1:19,0:18:35.81:1031,36,0	0/0:26,0:26:68.65:0,69,1045	0/0:18,0:18:51.08:0,51,1370	0/0:19,0:19:54:0,54,1133	0/0:9,0:9:27.06:0,27,683	0/0:15,0:15:42.08:0,42,965	0/0:14,0:14:42.12:0,42,723	0/0:25,0:25:72.13:0,72,1907	0/1:17,0:17:12.15:108,0,12	0/0:12,0:12:36.09:0,36,1020	0/1:24,0:24:53.83:94,0,54	0/0:23,0:23:60.16:0,60,1702	0/0:29,0:25:71.12:0,71,1291	0/0:17,0:17:48.05:0,48,1121	0/0:12,0:12:36.08:0,36,839	0/0:18,0:18:51.03:0,51,1033	0/0:13,0:13:33.07:0,33,714	0/0:17,0:17:47.75:0,48,1442	0/0:13,0:13:38.94:0,39,898	0/0:17,0:17:50.61:0,51,907	0/0:30,0:30:87.09:0,87,2206	0/0:4,0:4:12.04:0,12,308
chr10	89690280	.	AC	A	325.74	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.567;DP=504;FS=3.141;HRun=2;HaplotypeScore=72.8851;InbreedingCoeff=0.9439;MQ=71.06;MQ0=2;MQRankSum=-8.291;QD=3.36;ReadPosRankSum=4.202;VQSLOD=0.4868;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:19:12.21:62,12,0	1/1:6,0:6:9.43:42,9,0	0/0:25,0:14:33.63:0,34,279	0/0:19,0:14:34.31:0,34,262	0/0:17,0:17:42.50:0,42,341	1/1:19,0:19:6.59:49,7,0	1/1:4,12:16:24.07:275,24,0	0/0:30,0:30:74.92:0,75,673	0/0:19,0:19:41.97:0,42,379	0/0:18,0:18:41.47:0,41,462	0/0:14,0:14:24.89:0,25,289	0/0:16,0:16:39.03:0,39,401	0/0:15,0:15:42.06:0,42,432	0/0:25,0:25:71.11:0,71,732	1/1:14,0:14:8.96:28,9,0	0/0:14,0:14:33.91:0,34,337	1/1:23,0:23:14:43,14,0	0/0:23,0:23:60.33:0,60,547	0/0:26,0:23:43.46:0,43,483	0/0:16,0:16:33.82:0,34,313	0/0:13,0:13:34.40:0,34,302	0/0:16,0:16:36.01:0,36,354	0/0:12,0:12:23.96:0,24,241	0/0:18,0:18:51.08:0,51,540	0/0:10,0:10:27.48:0,27,274	0/0:22,0:22:59.09:0,59,569	0/0:30,0:30:77.48:0,77,798	0/0:7,0:7:20.96:0,21,186
chr10	89690281	.	C	CAAA	1140.21	PASS	AB=0.950;AC=9;AF=0.161;AN=56;BaseQRankSum=7.342;DP=492;FS=4.797;HRun=16;HaplotypeScore=91.4062;InbreedingCoeff=0.8493;MQ=73.35;MQ0=2;MQRankSum=-7.409;QD=15.20;ReadPosRankSum=2.984;VQSLOD=2.6736;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:17:23.87:385,24,0	1/1:4,2:6:14.72:209,15,0	0/0:26,0:15:25.59:0,26,365	0/0:22,0:15:39.93:0,40,502	0/0:17,0:17:51.05:0,51,723	0/1:18,0:19:12.47:64,0,12	0/0:12,0:12:10.60:0,11,29	0/0:33,0:33:78.16:0,78,1086	0/0:18,0:18:51.15:0,51,783	0/0:19,0:19:48.16:0,48,810	0/0:13,0:13:35.78:0,36,503	0/0:14,0:14:39.10:0,39,605	0/0:15,0:15:42.14:0,42,666	0/0:25,0:25:71.59:0,72,1195	1/1:0,13:13:12.04:243,12,0	0/0:13,0:13:36.11:0,36,580	1/1:4,16:20:23.91:400,24,0	0/0:23,0:23:63.19:0,63,1004	0/0:28,0:25:59.85:0,60,920	0/0:16,0:16:39.06:0,39,549	0/0:13,0:13:36.04:0,36,527	0/0:15,0:15:36.10:0,36,593	0/0:10,0:10:24.06:0,24,364	0/0:19,0:19:51.14:0,51,799	0/0:10,0:10:27.51:0,28,407	0/0:20,0:20:59.20:0,59,888	0/0:28,0:28:78.24:0,78,1257	0/0:8,0:8:21.04:0,21,289
chr10	89690366	.	GT	G	411.24	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.190;DP=632;FS=0.000;HRun=3;HaplotypeScore=60.9119;InbreedingCoeff=0.9997;MQ=78.74;MQ0=0;MQRankSum=-2.906;QD=29.37;ReadPosRankSum=1.818;VQSLOD=3.0285;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:63.19:0,63,905	1/1:0,14:14:39.13:506,39,0	0/0:13,0:13:36.10:0,36,501	0/0:17,0:17:51.14:0,51,716	0/0:26,0:26:78.26:0,78,1168	0/0:19,0:19:54.11:0,54,760	0/0:26,0:26:75.25:0,75,1123	0/0:25,0:25:69.22:0,69,1014	0/0:17,0:17:51.16:0,51,746	0/0:26,0:26:78.26:0,78,1168	0/0:29,0:29:87.29:0,87,1301	0/0:30,0:30:90.30:0,90,1331	0/0:21,0:21:63.21:0,63,944	0/0:16,0:16:48.16:0,48,716	0/0:27,0:27:69.22:0,69,1014	0/0:28,0:28:81.26:0,81,1173	0/0:22,0:22:60.20:0,60,897	0/0:21,0:21:63.19:0,63,912	0/0:22,0:22:63.19:0,63,922	0/0:18,0:18:54.17:0,54,778	0/0:29,0:29:87.28:0,87,1279	0/0:25,0:25:75.23:0,75,1069	0/0:21,0:21:60.20:0,60,899	0/0:24,0:24:72.24:0,72,1079	0/0:18,0:18:54.18:0,54,807	0/0:29,0:29:84.27:0,84,1237	0/0:29,0:29:87.29:0,87,1303	0/0:14,0:14:39.13:0,39,584
chr10	89690951	.	TTC	T	1251.62	PASS	AB=0.935;AC=23;AF=0.460;AN=50;BaseQRankSum=3.371;DP=542;FS=0.663;HRun=0;HaplotypeScore=69.9417;InbreedingCoeff=0.4573;MQ=71.33;MQ0=15;MQRankSum=2.639;QD=4.89;ReadPosRankSum=1.767;VQSLOD=2.4207;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:36:21:0,21,197	0/0:8,1:9:9.03:0,9,124	./.	./.	0/0:19,0:18:21.04:0,21,270	0/0:11,0:18:8.97:0,9,72	0/0:13,0:19:5.59:0,6,52	0/0:32,0:31:4.26:0,4,41	1/1:4,4:8:12.03:131,12,0	0/1:19,3:22:15:73,0,15	0/1:15,1:16:14.83:15,0,181	1/1:9,0:15:14.20:70,14,0	./.	1/1:10,0:13:5.68:28,6,0	0/0:10,0:10:3.01:0,3,45	1/1:10,12:23:32.92:342,33,0	0/0:21,0:22:36.08:0,36,422	0/1:24,5:29:86.75:87,0,390	0/1:16,0:16:8.82:9,0,227	0/0:12,0:12:8.39:0,8,89	0/0:22,0:24:14.96:0,15,138	0/0:18,0:18:21.04:0,21,273	1/1:11,3:14:9.49:99,9,0	1/1:15,10:23:24.06:263,24,0	1/1:9,4:15:11.70:94,12,0	1/1:14,3:17:6.10:75,6,0	0/1:16,0:16:15.37:15,0,151	1/1:19,7:26:12.03:131,12,0
chr10	89692132	.	TAC	T	2089.19	PASS	AB=0.826;AC=20;AF=0.385;AN=52;BaseQRankSum=1.117;DP=674;FS=2.568;HRun=0;HaplotypeScore=111.5402;InbreedingCoeff=0.5672;MQ=64.25;MQ0=6;MQRankSum=0.929;QD=7.52;ReadPosRankSum=0.882;VQSLOD=3.5648;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:35:15.48:0,15,159	0/0:5,0:8:2.99:0,3,26	./.	./.	1/1:14,6:19:12.01:132,12,0	0/0:22,0:22:18.52:0,19,149	0/0:28,0:46:9.48:0,9,96	0/0:20,0:20:6.01:0,6,61	1/1:17,11:30:20.72:193,21,0	0/1:16,1:19:47.79:48,0,157	0/0:8,0:8:12.04:0,12,180	1/1:9,8:19:14.87:146,15,0	1/1:9,9:18:27.07:297,27,0	1/1:9,12:22:20.89:212,21,0	0/0:9,0:30:14.99:0,15,128	0/1:27,2:29:15.02:15,0,517	0/0:15,0:26:30.46:0,30,260	1/1:8,9:20:6.68:245,7,0	0/0:10,0:14:10.18:0,10,72	0/0:13,0:18:15:0,15,143	0/0:44,0:72:11.99:0,12,114	1/1:11,9:20:15.51:165,16,0	1/1:8,5:15:14.71:127,15,0	0/1:20,28:51:9.51:688,0,10	0/1:13,2:15:9.01:9,0,250	0/0:29,0:28:42.05:0,42,505	0/0:5,0:13:3:0,3,26	0/0:8,0:7:15.01:0,15,155
chr10	89694070	.	A	AG	19000.09	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-15.058;DP=699;FS=10.111;HRun=3;HaplotypeScore=68.3099;InbreedingCoeff=0.9972;MQ=85.26;MQ0=0;MQRankSum=-5.331;QD=36.12;ReadPosRankSum=3.436;VQSLOD=5.1061;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:42:99:1596,114,0	1/1:0,5:5:15.05:210,15,0	0/0:27,0:27:66.17:0,66,758	0/0:21,0:21:57.17:0,57,681	1/1:1,18:19:48.16:667,48,0	1/1:2,23:25:66.22:924,66,0	1/1:1,27:28:75.25:1050,75,0	1/1:3,23:26:69.20:946,69,0	1/1:0,21:21:57.19:798,57,0	0/0:28,0:28:72.21:0,72,855	0/0:13,0:13:39.12:0,39,468	1/1:1,28:29:75.25:1047,75,0	1/1:2,26:28:72.07:1008,72,0	1/1:3,31:34:90.30:1254,90,0	1/1:2,22:24:57.19:798,57,0	0/0:28,0:28:81.23:0,81,959	1/1:3,27:30:73.52:1085,74,0	1/1:2,33:35:87.29:1218,87,0	1/1:0,22:22:66.22:917,66,0	1/1:1,12:13:33.11:462,33,0	1/1:1,25:26:75.25:1050,75,0	1/1:0,14:14:30.10:420,30,0	1/1:1,14:15:33.94:463,34,0	1/1:7,58:65:99:2161,156,0	0/0:19,0:19:57.17:0,57,684	0/0:20,0:20:57.16:0,57,673	1/1:0,25:25:66.22:924,66,0	0/0:17,0:16:45.06:0,45,479
chr10	89695193	.	G	GATT	15975.90	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-12.073;DP=664;FS=8.371;HRun=0;HaplotypeScore=89.5502;InbreedingCoeff=0.9938;MQ=85.06;MQ0=0;MQRankSum=-4.688;QD=48.41;ReadPosRankSum=4.242;VQSLOD=7.0655;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,47:50:99:2363,114,0	1/1:1,5:6:12.04:262,12,0	0/0:23,0:23:59.79:0,60,826	0/0:20,0:20:40.46:0,40,581	1/1:0,22:22:54.01:1081,54,0	0/0:14,0:14:33.11:0,33,523	0/0:28,0:28:72.16:0,72,1046	0/0:19,0:19:51.15:0,51,746	1/1:2,21:23:48.16:1048,48,0	0/0:14,0:14:39.13:0,39,598	0/0:14,0:14:39.13:0,39,616	1/1:7,22:29:57.20:1245,57,0	1/1:4,23:27:60.15:1264,60,0	1/1:0,15:16:45.15:974,45,0	1/1:5,28:33:75.26:1638,75,0	0/0:27,0:27:16.33:0,16,1104	1/1:2,33:35:81.07:1770,81,0	1/1:3,24:27:66.18:1396,66,0	0/0:17,0:17:45.13:0,45,667	0/0:22,0:22:66.21:0,66,1023	0/0:47,0:47:99:0,129,1972	1/1:3,20:23:48.08:969,48,0	1/1:0,11:11:24.08:524,24,0	1/1:1,26:28:66.23:1441,66,0	0/0:20,0:20:48.14:0,48,717	0/0:20,0:20:54.17:0,54,833	0/0:30,0:30:87.24:0,87,1328	0/0:19,0:19:57.13:0,57,831
chr10	89696550	.	GAT	G	8840.23	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=12.409;DP=497;FS=7.507;HRun=0;HaplotypeScore=74.7150;InbreedingCoeff=0.8617;MQ=70.24;MQ0=0;MQRankSum=0.509;QD=23.83;ReadPosRankSum=1.059;VQSLOD=5.3364;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:33:71.02:349,71,0	1/1:4,0:15:28.41:139,28,0	0/0:3,0:2:3.01:0,3,50	0/1:13,0:13:21.11:21,0,125	1/1:1,21:22:63.17:778,63,0	1/1:3,20:23:54.17:681,54,0	1/1:1,12:13:27.09:341,27,0	1/1:8,29:37:87.25:1061,87,0	1/1:2,18:20:51.16:643,51,0	0/0:24,1:25:22.30:0,22,841	0/0:23,0:23:60.19:0,60,960	1/1:1,16:17:36.11:454,36,0	1/1:2,19:21:54.17:681,54,0	1/1:0,16:16:36.12:454,36,0	1/1:0,0:24:65.34:322,65,0	0/0:15,0:15:42.14:0,42,693	1/1:1,0:16:36.93:182,37,0	1/1:2,20:22:42.13:530,42,0	1/1:4,11:15:33.09:403,33,0	1/1:4,14:18:42.09:512,42,0	1/1:1,4:5:9.03:114,9,0	1/1:0,8:8:17.97:189,18,0	1/1:2,5:7:15.05:189,15,0	1/1:0,10:10:27.09:341,27,0	0/0:15,0:15:39.11:0,39,620	0/0:25,0:25:38.72:0,39,915	1/1:0,16:16:36.12:454,36,0	0/0:19,1:20:19.33:0,19,843
chr10	89697421	.	CCAA	C	1474.85	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=12.213;DP=531;FS=25.745;HRun=0;HaplotypeScore=88.7274;InbreedingCoeff=0.8790;MQ=80.76;MQ0=0;MQRankSum=-3.371;QD=10.77;ReadPosRankSum=-0.022;VQSLOD=1.1749;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.27:0,81,1738	0/0:7,0:7:21.07:0,21,425	0/0:15,0:14:42.14:0,42,815	0/0:21,0:21:51.58:0,52,931	1/1:5,0:5:8.85:56,9,0	0/0:21,0:21:60.20:0,60,1272	0/0:31,0:31:93.30:0,93,1893	0/0:24,0:24:72.25:0,72,1505	1/1:13,0:13:12.10:70,12,0	0/0:24,0:24:69.24:0,69,1426	0/0:11,0:11:30.09:0,30,569	1/1:14,3:17:29.68:334,30,0	1/1:20,1:21:32.45:256,32,0	1/1:18,1:19:17.63:153,18,0	0/0:21,0:21:63.22:0,63,1326	0/0:21,0:21:63.22:0,63,1331	0/0:32,0:32:90.29:0,90,1926	1/1:25,3:28:47.25:427,47,0	0/0:19,0:19:57.20:0,57,1208	0/0:6,0:6:18.05:0,18,349	0/0:52,0:52:99:0,150,3102	0/1:8,0:8:53.03:64,0,53	1/1:1,4:5:6.45:73,6,0	1/1:18,3:21:24.21:246,24,0	0/0:8,0:8:24.08:0,24,494	0/0:21,0:21:54.17:0,54,1122	0/0:24,0:24:72.25:0,72,1544	0/0:8,0:8:21.06:0,21,450
chr10	89697422	.	CAA	C	2415.18	PASS	AB=0.533;AC=17;AF=0.304;AN=56;BaseQRankSum=11.790;DP=522;FS=25.891;HRun=2;HaplotypeScore=74.6327;InbreedingCoeff=0.8803;MQ=82.60;MQ0=0;MQRankSum=-7.132;QD=18.58;ReadPosRankSum=0.160;VQSLOD=-0.2014;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.28:0,81,1447	0/0:7,0:7:21.07:0,21,359	0/0:16,0:15:45.15:0,45,733	0/0:22,0:22:54.59:0,55,854	1/1:0,4:4:9.03:136,9,0	0/0:21,0:21:63.22:0,63,1119	0/0:31,0:31:93.30:0,93,1617	0/0:24,0:24:72.25:0,72,1283	1/1:0,2:13:12.90:150,13,0	0/0:24,0:24:69.24:0,69,1225	0/0:11,0:11:30.09:0,30,491	1/1:3,14:17:30.64:447,31,0	1/1:1,18:19:33.09:477,33,0	1/1:1,14:16:18.04:223,18,0	0/0:21,0:21:63.22:0,63,1105	0/0:21,0:21:63.22:0,63,1124	0/0:30,0:30:90.31:0,90,1615	1/1:3,24:27:48.14:688,48,0	0/0:19,0:19:57.20:0,57,1016	0/0:6,0:6:18.05:0,18,294	0/0:51,0:51:99:0,154,2688	0/1:1,7:8:41.93:123,0,42	1/1:4,1:5:6.44:48,6,0	1/1:3,18:21:24.53:324,25,0	0/0:8,0:8:24.08:0,24,423	0/0:21,0:21:54.17:0,54,946	0/0:24,0:24:72.25:0,72,1286	0/0:8,0:8:21.06:0,21,372
chr10	89698219	.	CT	C	1511.64	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.290;DP=495;FS=4.335;HRun=12;HaplotypeScore=79.0544;InbreedingCoeff=0.9744;MQ=69.72;MQ0=5;MQRankSum=-4.305;QD=16.98;ReadPosRankSum=2.240;VQSLOD=4.9012;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,27:35:56.08:578,56,0	1/1:3,10:12:32.87:255,33,0	0/0:34,0:15:12.25:0,12,120	0/0:24,0:17:36.71:0,37,280	0/0:19,1:20:33.66:0,34,499	0/0:12,0:12:29.54:0,30,278	0/0:14,0:14:27.03:0,27,261	0/0:27,0:27:54.01:0,54,519	0/0:7,0:7:15.02:0,15,147	0/0:10,0:10:17.90:0,18,154	0/0:15,0:16:41.92:0,42,409	0/0:18,0:18:31.65:0,32,406	0/0:12,0:12:30.02:0,30,289	0/0:22,0:22:39.08:0,39,394	1/1:2,15:17:46.38:352,46,0	0/0:10,0:10:24.03:0,24,237	1/1:4,19:24:64.75:486,65,0	0/0:28,0:28:63.08:0,63,624	0/0:23,0:23:54.03:0,54,509	0/0:9,0:9:21.04:0,21,210	0/0:20,0:21:38.91:0,39,380	0/0:6,0:6:14.99:0,15,141	0/0:9,0:9:21.03:0,21,207	0/0:19,0:19:36.96:0,37,349	0/0:16,0:16:38.91:0,39,375	0/0:19,0:19:24.63:0,25,352	0/0:22,0:22:41.88:0,42,520	0/0:7,0:7:18.04:0,18,182
chr10	89698261	.	ATG	A	2183.73	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-1.488;DP=604;FS=7.256;HRun=0;HaplotypeScore=133.7515;InbreedingCoeff=0.9980;MQ=64.73;MQ0=0;MQRankSum=-5.595;QD=25.69;ReadPosRankSum=1.674;VQSLOD=4.8080;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,26:31:72.23:921,72,0	1/1:1,9:10:24.08:308,24,0	0/0:27,0:25:50.24:0,50,747	0/0:23,0:21:44.68:0,45,697	0/0:6,0:32:58.49:0,58,439	0/0:4,0:20:37.67:0,38,300	0/0:5,0:20:32.99:0,33,286	0/0:11,0:24:44.52:0,45,405	0/0:1,0:10:27.01:0,27,240	0/0:23,0:23:69.23:0,69,1141	0/0:22,0:22:63.22:0,63,1051	0/0:2,0:16:30.02:0,30,267	0/0:0,0:9:24.01:0,24,213	0/0:3,0:17:32.69:0,33,266	1/1:0,23:23:57.18:731,57,0	0/0:17,0:18:54.16:0,54,861	1/1:4,17:21:30.10:385,30,0	0/0:9,0:35:62.04:0,62,534	0/0:13,0:30:71.27:0,71,660	0/0:5,0:21:39.12:0,39,310	0/0:5,0:25:41.06:0,41,353	0/0:6,0:19:37.09:0,37,304	0/0:3,0:16:39.01:0,39,342	0/0:2,0:25:45.49:0,45,401	0/0:19,0:19:57.17:0,57,910	0/0:28,0:28:78.24:0,78,1242	0/0:6,0:24:57.02:0,57,506	0/0:14,0:14:42.14:0,42,708
chr10	89702558	.	CT	C	11260.47	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=13.526;DP=693;FS=0.000;HRun=3;HaplotypeScore=68.7407;InbreedingCoeff=0.9954;MQ=85.20;MQ0=0;MQRankSum=-2.527;QD=38.56;ReadPosRankSum=2.068;VQSLOD=5.0966;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,46:46:99:1804,129,0	1/1:0,9:9:27.09:377,27,0	0/0:24,0:24:70.43:0,70,1048	0/0:19,0:19:49.01:0,49,730	0/0:26,0:26:72.23:0,72,1122	1/1:0,22:22:51.17:713,51,0	1/1:0,21:21:60.20:839,60,0	1/1:0,27:27:81.27:1128,81,0	0/0:18,0:18:54.18:0,54,861	0/0:27,0:27:81.28:0,81,1290	0/0:25,0:25:72.24:0,72,1142	0/0:32,0:32:96.31:0,96,1505	0/0:21,0:21:63.21:0,63,1003	0/0:32,0:32:93.32:0,93,1469	1/1:0,28:28:84.28:1175,84,0	0/0:29,0:29:87.30:0,87,1391	1/1:0,36:36:90.30:1259,90,0	0/0:29,1:30:45.38:0,45,1264	1/1:0,28:28:84.28:1165,84,0	1/1:0,10:10:30.10:413,30,0	1/1:0,32:32:78.26:1091,78,0	0/0:13,0:13:36.12:0,36,569	0/0:17,0:17:51.13:0,51,732	0/0:35,0:35:99:0,105,1653	0/0:24,0:24:69.24:0,69,1102	0/0:25,0:25:75.26:0,75,1197	1/1:0,33:33:93.31:1297,93,0	0/0:4,0:4:12.04:0,12,192
chr10	89703196	.	TAC	T	1609.68	PASS	AB=0.930;AC=44;AF=0.786;AN=56;BaseQRankSum=10.859;DP=573;FS=8.829;HRun=0;HaplotypeScore=140.6375;InbreedingCoeff=0.2850;MQ=55.76;MQ0=14;MQRankSum=-3.617;QD=3.25;ReadPosRankSum=1.768;VQSLOD=1.9958;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:28.40:159,28,0	1/1:7,0:7:11.73:69,12,0	0/1:32,1:14:28.90:29,0,30	0/0:47,0:25:19.28:0,19,209	1/1:15,0:15:11.86:41,12,0	1/1:28,0:27:17.23:83,17,0	1/1:22,0:22:17.50:105,18,0	1/1:23,0:23:19.04:94,19,0	1/1:18,0:17:20.98:77,21,0	0/1:18,2:20:35.92:36,0,527	0/1:16,2:18:27.98:28,0,454	1/1:17,0:17:13.24:48,13,0	1/1:10,0:9:4.74:16,5,0	1/1:16,0:15:26.80:91,27,0	1/1:15,0:14:18.30:101,18,0	0/1:11,1:13:1.89:2,0,416	1/1:28,0:28:17.54:100,18,0	0/1:21,0:21:19.31:62,0,19	1/1:13,0:12:5.68:71,6,0	1/1:20,0:20:16.81:87,17,0	1/1:24,0:22:3.37:17,3,0	1/1:8,0:8:11.53:40,12,0	1/1:17,0:17:21.46:74,21,0	1/1:36,0:36:14.12:130,14,0	0/0:16,1:17:1.13:0,1,470	0/1:17,2:19:33.89:34,0,413	1/1:23,0:23:34:178,34,0	0/0:13,0:13:33.09:0,33,491
chr10	89703215	.	ACACACACG	A	1787.64	PASS	AB=0.974;AC=17;AF=0.304;AN=56;BaseQRankSum=7.383;DP=594;FS=17.096;HRun=0;HaplotypeScore=188.5954;InbreedingCoeff=0.4488;MQ=57.78;MQ0=19;MQRankSum=-8.646;QD=7.33;ReadPosRankSum=-2.155;VQSLOD=1.4361;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:6.53:200,0,7	1/1:11,0:11:14.91:112,15,0	0/0:42,0:13:32.82:0,33,388	0/0:51,0:30:48.24:0,48,1035	0/0:21,0:21:14.11:0,14,96	0/1:22,0:21:39.79:75,0,40	1/1:18,2:20:17.95:198,18,0	0/1:18,1:19:95.52:241,0,96	0/1:18,1:18:78.42:78,0,121	0/0:21,0:20:57.14:0,57,1752	0/0:18,0:18:51.16:0,51,1691	0/0:20,0:20:23.08:0,23,149	0/0:13,0:12:5.74:0,6,39	0/0:19,0:18:38.40:0,38,260	1/1:17,2:18:31.09:274,31,0	0/0:14,0:14:36.12:0,36,1425	0/1:28,1:29:20.26:221,0,20	0/0:24,0:23:25.52:0,26,292	0/1:13,0:11:2.63:169,0,3	0/1:19,1:20:1.74:93,0,2	1/1:22,0:20:3.87:24,4,0	0/0:10,0:10:15.31:0,15,99	0/0:18,1:19:26.68:0,27,176	0/0:32,0:32:68.30:0,68,463	0/0:20,0:20:50.22:0,50,1639	0/0:15,0:15:45.14:0,45,1535	1/1:20,1:21:15.83:284,16,0	0/0:11,0:11:33.11:0,33,1438
chr10	89703217	.	ACACACG	A	5857.29	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=9.189;DP=593;FS=16.730;HRun=0;HaplotypeScore=161.5266;InbreedingCoeff=0.8172;MQ=57.99;MQ0=19;MQRankSum=-5.799;QD=14.64;ReadPosRankSum=4.038;VQSLOD=2.8305;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,21:29:29.91:687,30,0	1/1:0,11:11:15:301,15,0	0/0:41,0:13:29.20:0,29,283	0/0:50,0:29:51.77:0,52,836	1/1:18,3:21:14.11:82,14,0	1/1:6,15:20:19.49:347,19,0	1/1:2,18:20:18.06:398,18,0	1/1:6,14:20:47.25:640,47,0	1/1:17,1:17:29.52:202,30,0	0/0:21,0:20:56.50:0,57,1359	0/0:17,0:17:51:0,51,1261	1/1:19,0:19:1.16:25,1,0	1/1:12,0:11:4.91:14,5,0	1/1:19,0:18:24.89:75,25,0	1/1:10,9:18:32.73:564,33,0	0/0:15,0:15:39.09:0,39,1130	1/1:17,11:28:43.79:621,44,0	0/1:25,0:24:31.18:46,0,31	1/1:7,6:11:10.67:469,11,0	1/1:4,15:19:17.27:354,17,0	1/1:4,18:20:3.90:71,4,0	1/1:10,0:10:10.41:32,10,0	1/1:19,1:20:19.92:61,20,0	1/1:32,0:32:29.47:120,29,0	0/0:20,0:20:47.19:0,47,1263	0/0:16,0:16:45.10:0,45,1193	1/1:4,18:22:35.26:748,35,0	0/0:13,0:13:39.04:0,39,1190
chr10	89703219	.	ACACG	A	7503.68	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=7.204;DP=581;FS=23.547;HRun=0;HaplotypeScore=139.1078;InbreedingCoeff=0.9473;MQ=58.18;MQ0=18;MQRankSum=-5.595;QD=19.29;ReadPosRankSum=3.145;VQSLOD=2.5449;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:30:338,30,0	1/1:11,0:11:14.99:161,15,0	0/0:38,0:13:28.85:0,29,226	0/0:49,0:28:51.41:0,51,724	1/1:6,15:21:17.89:283,18,0	1/1:18,1:18:21.06:274,21,0	1/1:20,0:20:18.05:209,18,0	1/1:18,1:19:44.74:413,45,0	1/1:9,10:18:39.09:577,39,0	0/0:22,0:21:25.72:0,26,885	0/0:17,0:17:42.08:0,42,840	1/1:3,15:18:18.53:323,19,0	1/1:1,11:11:6.49:108,6,0	1/1:3,16:18:33.58:592,34,0	1/1:19,0:18:35.64:343,36,0	0/0:15,0:15:39.07:0,39,814	1/1:27,0:27:44.25:387,44,0	1/1:4,20:23:34.58:643,35,0	1/1:12,0:10:26.78:278,27,0	1/1:18,1:19:18.05:226,18,0	1/1:21,0:19:3.89:36,4,0	1/1:0,10:10:14.74:268,15,0	1/1:2,18:20:26.87:483,27,0	1/1:3,28:31:63.22:1127,63,0	0/0:20,0:20:47.95:0,48,922	0/0:16,0:16:41.73:0,42,828	1/1:21,1:22:35.60:434,36,0	0/0:13,0:13:39.04:0,39,883
chr10	89703221	.	ACG	A	3769.79	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=10.955;DP=561;FS=16.109;HRun=0;HaplotypeScore=136.1537;InbreedingCoeff=0.9428;MQ=59.57;MQ0=16;MQRankSum=-4.228;QD=10.03;ReadPosRankSum=3.774;VQSLOD=2.5300;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:23:29.26:198,29,0	1/1:11,0:11:14.87:105,15,0	0/0:38,0:13:27.76:0,28,245	0/0:46,0:28:49.54:0,50,596	1/1:21,0:21:17.78:120,18,0	1/1:17,0:17:20.71:137,21,0	1/1:20,0:20:17.86:127,18,0	1/1:16,0:16:43.57:342,44,0	1/1:18,1:18:38.24:254,38,0	0/0:22,0:21:25.26:0,25,691	0/0:17,0:17:25.18:0,25,611	1/1:17,0:17:21.11:132,21,0	1/1:11,1:11:6.38:39,6,0	1/1:18,0:17:35.47:229,35,0	1/1:19,0:18:35.38:259,35,0	0/0:15,0:15:28.61:0,29,554	1/1:24,1:25:44.17:316,44,0	1/1:24,0:23:24.47:230,24,0	1/1:13,0:11:31.17:229,31,0	1/1:17,1:18:17.79:122,18,0	1/1:20,0:18:3.44:21,3,0	1/1:10,0:10:14.45:95,14,0	1/1:20,0:20:26.53:172,27,0	1/1:30,0:30:59.63:395,60,0	0/0:19,0:19:32.88:0,33,710	0/0:15,0:15:16.65:0,17,558	1/1:21,0:22:35.57:247,36,0	0/0:13,0:13:39.04:0,39,650
chr10	89704397	.	T	TC	3881.97	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=7.949;DP=570;FS=4.349;HRun=0;HaplotypeScore=112.6936;InbreedingCoeff=0.9762;MQ=57.40;MQ0=14;MQRankSum=-0.751;QD=9.56;ReadPosRankSum=5.456;VQSLOD=3.8310;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:32:63.40:287,63,0	1/1:5,0:5:11.60:52,12,0	0/0:38,0:16:14.33:0,14,310	0/0:26,0:13:17.57:0,18,184	1/1:16,0:16:14.27:125,14,0	1/1:19,0:19:31.91:208,32,0	1/1:31,1:32:55.20:329,55,0	1/1:21,2:23:31.54:293,32,0	1/1:20,0:19:35.06:188,35,0	0/0:19,0:18:50.94:0,51,487	0/0:5,0:5:11.94:0,12,105	1/1:29,0:28:38.78:206,39,0	1/1:6,0:6:12.82:55,13,0	1/1:18,0:18:33.38:196,33,0	1/1:25,0:25:39.77:172,40,0	0/0:25,0:25:66.01:0,66,727	1/1:21,0:21:46.41:240,46,0	1/1:23,0:23:44.72:237,45,0	1/1:20,0:19:37.12:229,37,0	1/1:16,1:16:28.77:169,29,0	1/1:17,1:16:29.39:189,29,0	1/1:20,0:20:30.53:136,31,0	1/1:18,0:18:27.10:154,27,0	1/1:22,0:22:35.43:199,35,0	0/0:20,0:19:48.03:0,48,554	0/0:15,0:15:41.98:0,42,449	1/1:21,0:21:37.63:217,38,0	0/0:16,0:14:38.94:0,39,377
chr10	89704406	.	TTTTTC	T	4406.32	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=11.032;DP=584;FS=1.335;HRun=0;HaplotypeScore=131.6515;InbreedingCoeff=0.6741;MQ=55.61;MQ0=14;MQRankSum=-4.488;QD=10.47;ReadPosRankSum=9.508;VQSLOD=2.8817;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:37,1:37:47.13:452,47,0	1/1:4,0:4:8.02:96,8,0	0/0:36,0:15:32.66:0,33,345	0/0:24,0:11:13.43:0,13,97	1/1:19,0:19:22.99:173,23,0	0/1:18,0:18:10.40:101,0,10	0/1:32,0:32:6.63:144,0,7	0/1:22,0:22:43.33:116,0,43	1/1:20,0:19:29.59:259,30,0	0/0:19,0:18:54.02:0,54,916	0/0:4,0:4:12.01:0,12,160	1/1:29,2:30:8.28:282,8,0	1/1:7,0:7:18.44:153,18,0	1/1:20,0:20:19.87:279,20,0	1/1:30,1:31:31.30:348,31,0	0/0:28,0:28:72.17:0,72,1503	1/1:20,0:19:38.83:357,39,0	1/1:21,2:23:25.99:431,26,0	0/1:17,0:16:52.99:53,0,86	1/1:17,0:16:15.69:170,16,0	1/1:19,0:17:23.21:134,23,0	1/1:21,0:21:38.18:302,38,0	1/1:17,0:17:20.55:179,21,0	1/1:24,0:24:32.79:280,33,0	0/0:21,0:20:45.11:0,45,937	0/0:15,0:15:41.66:0,42,844	1/1:21,0:21:21.84:95,22,0	0/0:16,0:14:33.09:0,33,635
chr10	89704407	.	TTTTC	T	7486.73	PASS	AB=0.977;AC=38;AF=0.679;AN=56;BaseQRankSum=9.265;DP=575;FS=0.431;HRun=0;HaplotypeScore=110.9158;InbreedingCoeff=0.8472;MQ=54.49;MQ0=14;MQRankSum=-4.228;QD=18.00;ReadPosRankSum=7.287;VQSLOD=4.2047;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,29:37:59.99:784,60,0	1/1:1,3:4:11.96:135,12,0	0/0:32,0:12:21.87:0,22,280	0/0:21,1:10:13.40:0,13,88	1/1:3,16:19:24.14:297,24,0	1/1:17,1:18:10.20:195,10,0	1/1:31,0:31:31.02:289,31,0	0/1:20,1:21:2.61:255,0,3	1/1:3,17:19:29.95:458,30,0	0/0:19,0:18:50.64:0,51,729	0/0:6,0:6:17.50:0,18,176	1/1:9,22:30:33.17:467,33,0	1/1:3,4:7:20.98:268,21,0	1/1:5,14:19:32.94:467,33,0	1/1:4,27:31:44.52:597,45,0	0/0:27,0:27:69.16:0,69,1246	1/1:2,17:18:39.13:598,39,0	1/1:3,20:23:42.02:588,42,0	0/1:17,0:16:12.93:129,0,13	1/1:14,3:16:26.88:291,27,0	1/1:18,0:16:24.02:223,24,0	1/1:2,19:21:38.35:465,38,0	1/1:2,15:17:20.52:281,21,0	1/1:2,22:24:36.02:490,36,0	0/0:21,0:20:39.08:0,39,734	0/0:15,0:15:22.05:0,22,682	1/1:21,0:21:29.40:212,29,0	0/0:16,0:14:33.05:0,33,520
chr10	89704408	.	TTTC	T	6341.40	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=10.700;DP=567;FS=0.000;HRun=0;HaplotypeScore=106.8885;InbreedingCoeff=0.8614;MQ=54.58;MQ0=13;MQRankSum=-3.756;QD=14.35;ReadPosRankSum=5.226;VQSLOD=4.1296;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:33,4:36:59.80:554,60,0	1/1:4,0:4:8.98:76,9,0	0/1:31,0:12:13.94:14,0,150	0/0:22,0:9:5.17:0,5,30	1/1:18,1:19:23.65:199,24,0	1/1:6,12:18:21.03:274,21,0	1/1:5,25:31:42.01:505,42,0	1/1:6,13:19:42.07:516,42,0	1/1:18,0:17:29.98:267,30,0	0/0:18,0:18:44.64:0,45,524	0/0:7,0:7:7.06:0,7,147	1/1:31,0:30:31.20:269,31,0	1/1:8,0:8:23.94:201,24,0	1/1:17,2:19:33.03:316,33,0	1/1:31,0:31:44.54:356,45,0	0/0:27,0:27:63:0,63,907	1/1:19,0:18:38.98:349,39,0	1/1:23,0:23:38.97:347,39,0	1/1:5,12:16:35.01:331,35,0	1/1:7,9:16:27.03:302,27,0	1/1:3,15:16:24.08:327,24,0	1/1:21,0:21:38.34:295,38,0	1/1:17,0:17:20.53:167,21,0	1/1:23,1:24:35.26:299,35,0	0/0:20,0:19:38.06:0,38,532	0/0:15,0:15:32.97:0,33,492	1/1:2,18:20:29.94:379,30,0	0/0:16,0:14:30.52:0,31,385
chr10	89704409	.	TTC	T	4420.14	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=10.847;DP=553;FS=2.746;HRun=0;HaplotypeScore=103.4822;InbreedingCoeff=0.8177;MQ=54.59;MQ0=18;MQRankSum=-4.152;QD=11.05;ReadPosRankSum=6.299;VQSLOD=4.5702;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:58.82:390,59,0	1/1:4,0:4:6.12:59,6,0	0/0:30,0:12:1.30:0,1,131	0/0:21,0:9:1.96:0,2,42	1/1:19,0:19:23.83:148,24,0	1/1:16,1:17:20.91:161,21,0	1/1:29,1:30:41.79:327,42,0	1/1:19,0:19:12.93:277,13,0	1/1:17,0:16:29.72:210,30,0	0/0:19,0:18:21.40:0,21,397	0/0:8,0:7:0.83:0,1,125	1/1:29,0:28:31.58:228,32,0	1/1:8,0:8:23.84:174,24,0	1/1:17,0:17:32.83:245,33,0	1/1:31,0:31:42.78:258,43,0	0/0:26,0:26:56.36:0,56,729	1/1:20,0:18:38.67:275,39,0	1/1:22,0:22:39.48:279,39,0	1/1:18,0:16:0.25:134,0,0	1/1:16,0:15:26.84:197,27,0	1/1:18,0:16:23.92:187,24,0	1/1:20,0:20:38.14:253,38,0	1/1:17,0:16:20.54:140,21,0	1/1:23,0:23:33.86:220,34,0	0/0:19,0:18:29.92:0,30,457	0/0:14,0:14:34.54:0,35,438	1/1:18,2:20:29.93:260,30,0	0/0:16,0:14:29.71:0,30,337
chr10	89704410	.	TCTTC	T	4541.12	PASS	AB=0.971;AC=40;AF=0.714;AN=56;BaseQRankSum=11.254;DP=544;FS=3.347;HRun=0;HaplotypeScore=113.9418;InbreedingCoeff=0.7993;MQ=54.25;MQ0=18;MQRankSum=-2.755;QD=11.35;ReadPosRankSum=6.761;VQSLOD=3.8286;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:58.89:445,59,0	1/1:4,0:4:10.40:66,10,0	0/0:28,0:11:23.18:0,23,229	0/0:20,0:9:6.62:0,7,81	1/1:18,1:19:8.65:158,9,0	1/1:16,0:16:14.37:85,14,0	1/1:28,1:29:32.61:172,33,0	1/1:16,2:18:3.19:218,3,0	1/1:17,0:16:29.82:271,30,0	0/0:18,0:18:20.17:0,20,757	0/1:8,0:7:1.08:1,0,263	1/1:25,2:26:25.68:322,26,0	1/1:8,0:8:17.71:208,18,0	1/1:16,1:17:30.41:281,30,0	1/1:30,0:30:39.88:353,40,0	0/0:26,0:26:61:0,61,1224	1/1:20,1:19:24.28:366,24,0	1/1:22,0:22:39.62:297,40,0	0/1:15,0:14:26.54:78,0,27	1/1:15,1:15:24.58:216,25,0	1/1:17,1:16:21.82:134,22,0	1/1:20,0:20:34.69:288,35,0	1/1:16,1:16:20.78:186,21,0	1/1:23,0:23:35.44:276,35,0	0/0:16,0:17:36.12:0,36,707	0/0:14,0:14:35.94:0,36,735	1/1:20,0:20:24.99:122,25,0	0/0:17,0:15:32.92:0,33,605
chr10	89705483	.	T	TGGTC	3032.64	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=6.152;DP=330;FS=24.772;HRun=0;HaplotypeScore=61.8600;InbreedingCoeff=0.8321;MQ=78.15;MQ0=0;MQRankSum=-2.202;QD=15.96;ReadPosRankSum=-4.444;VQSLOD=0.4936;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:32.96:334,33,0	1/1:5,0:5:9.87:90,10,0	0/0:15,0:13:20.12:0,20,509	0/0:11,0:12:29.20:0,29,473	1/1:5,0:5:8.97:71,9,0	1/1:0,8:9:3.48:78,3,0	1/1:9,19:30:24.55:467,25,0	1/1:10,0:11:26.33:302,26,0	1/1:7,0:7:19.19:241,19,0	0/0:32,0:32:87.08:0,87,1651	0/0:10,0:10:27.08:0,27,504	1/1:7,0:7:14.98:184,15,0	1/1:6,0:6:14.49:115,14,0	1/1:4,0:4:8.65:57,9,0	1/1:10,0:10:20.65:233,21,0	0/0:27,0:27:81.28:0,81,1591	1/1:13,0:13:29:286,29,0	1/1:6,0:6:18.03:223,18,0	1/1:0,8:8:23.17:208,23,0	1/1:5,0:5:5.39:22,5,0	1/1:25,1:26:10.73:137,11,0	1/1:3,0:3:9:88,9,0	1/1:2,0:2:2.99:23,3,0	1/1:3,0:3:2.84:14,3,0	0/0:10,0:10:30.10:0,30,588	0/0:29,0:29:71.85:0,72,1275	1/1:3,13:15:6.63:61,7,0	0/0:5,0:5:15.05:0,15,299
chr10	89705484	.	G	GGT	2494.82	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=7.889;DP=321;FS=26.460;HRun=0;HaplotypeScore=52.5268;InbreedingCoeff=0.8144;MQ=78.55;MQ0=0;MQRankSum=-4.790;QD=13.71;ReadPosRankSum=-4.563;VQSLOD=0.8837;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:32.70:251,33,0	1/1:5,0:5:11.61:107,12,0	0/0:15,0:13:24.09:0,24,390	0/0:12,0:12:5.58:0,6,347	1/1:4,0:4:8.98:73,9,0	1/1:9,0:9:3.48:39,3,0	1/1:27,0:28:23.60:313,24,0	1/1:11,0:11:26.95:284,27,0	1/1:7,0:7:20.89:173,21,0	0/0:32,0:32:87.75:0,88,1357	0/0:10,0:10:27.08:0,27,414	1/1:5,1:6:11.96:96,12,0	1/1:6,0:6:14.95:121,15,0	1/1:5,0:5:8.78:61,9,0	1/1:9,0:9:20.95:170,21,0	0/0:27,0:27:81.28:0,81,1295	1/1:14,0:14:32.73:287,33,0	1/1:6,0:6:17.90:135,18,0	1/1:8,0:8:23.85:193,24,0	1/1:5,0:5:5.88:36,6,0	1/1:5,19:26:12.04:188,12,0	1/1:3,0:3:9:90,9,0	1/1:1,0:1:2.99:24,3,0	1/1:2,0:2:2.34:8,2,0	0/0:11,0:11:30.10:0,30,478	0/0:27,0:27:72.21:0,72,1034	1/1:14,0:14:5.38:44,5,0	0/0:5,0:5:15.05:0,15,237
chr10	89705486	.	T	TCGC	2167.57	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=8.781;DP=321;FS=15.995;HRun=0;HaplotypeScore=70.7928;InbreedingCoeff=0.7410;MQ=78.69;MQ0=0;MQRankSum=-3.099;QD=11.91;ReadPosRankSum=-3.860;VQSLOD=1.0415;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:26.78:217,27,0	1/1:5,0:5:8.91:78,9,0	0/0:15,0:15:27.44:0,27,296	0/0:11,0:11:25.60:0,26,328	1/1:3,0:3:2.95:25,3,0	1/1:9,0:9:3.48:47,3,0	1/1:26,4:30:31.20:461,31,0	1/1:7,7:14:26.73:302,27,0	1/1:7,0:7:16.24:133,16,0	0/0:30,0:31:80.97:0,81,1165	0/0:9,0:9:24.54:0,25,393	1/1:3,0:4:5.93:71,6,0	0/1:10,0:10:1.94:2,0,6	1/1:5,0:5:6.39:43,6,0	1/1:7,0:7:17.95:144,18,0	0/0:29,0:29:84.18:0,84,1229	1/1:13,0:13:28.73:262,29,0	1/1:5,0:5:14.67:95,15,0	1/1:8,0:8:20.62:152,21,0	1/1:6,0:6:5.48:23,5,0	1/1:20,3:23:14.15:200,14,0	1/1:1,0:1:3.01:41,3,0	1/1:1,0:1:3:25,3,0	1/1:2,0:2:2.04:6,2,0	0/0:12,0:12:30.04:0,30,390	0/0:25,0:25:61.78:0,62,664	1/1:16,0:15:3.95:35,4,0	0/0:5,0:5:15.02:0,15,205
chr10	89705487	.	C	CG	1264.15	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=8.114;DP=315;FS=12.848;HRun=0;HaplotypeScore=59.1976;InbreedingCoeff=0.5965;MQ=79.03;MQ0=0;MQRankSum=-2.495;QD=7.27;ReadPosRankSum=-2.525;VQSLOD=1.6699;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:26.12:197,26,0	1/1:5,0:5:8.91:78,9,0	0/0:17,0:15:16.51:0,17,251	0/0:10,0:11:25.69:0,26,275	1/1:1,1:2:2.96:24,3,0	1/1:9,0:9:3.27:13,3,0	1/1:29,0:29:12.27:136,12,0	0/1:13,0:13:17.46:116,0,17	1/1:6,0:6:16.13:119,16,0	0/0:33,0:33:83.92:0,84,1002	0/0:9,0:9:24.07:0,24,317	1/1:2,0:3:2.92:17,3,0	0/1:8,0:8:0.71:1,0,6	0/1:5,0:5:12.29:33,0,12	1/1:7,0:7:17.95:144,18,0	0/0:29,0:29:87.16:0,87,1061	1/1:13,0:13:28.54:176,29,0	1/1:5,0:5:14.71:95,15,0	1/1:8,0:8:20.40:127,20,0	1/1:1,5:6:5.48:23,5,0	1/1:23,0:23:11.44:73,11,0	1/1:1,0:1:3.01:41,3,0	1/1:1,0:1:3:25,3,0	1/1:2,0:2:2.04:6,2,0	0/0:13,0:13:33.04:0,33,363	0/0:24,0:24:61.31:0,61,600	1/1:15,0:14:0.20:9,0,0	0/0:5,0:5:15.02:0,15,173
chr10	89706521	.	AC	A	6148.69	PASS	AB=0.929;AC=45;AF=0.804;AN=56;BaseQRankSum=-4.203;DP=493;FS=23.688;HRun=14;HaplotypeScore=84.9256;InbreedingCoeff=0.3884;MQ=68.77;MQ0=2;MQRankSum=0.415;QD=13.08;ReadPosRankSum=3.037;VQSLOD=3.2443;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,31:39:89.10:614,89,0	1/1:1,4:5:8.92:62,9,0	0/1:33,0:14:11.29:11,0,73	0/1:19,1:12:18.22:18,0,65	1/1:4,7:11:20.75:144,21,0	1/1:1,8:9:17.82:123,18,0	1/1:4,24:28:65.33:451,65,0	1/1:11,15:26:43.71:290,44,0	1/1:3,17:20:38.63:267,39,0	0/0:8,0:8:0:0,0,0	0/0:3,0:3:2.98:0,3,21	1/1:7,16:23:38.54:266,39,0	1/1:2,8:10:17.83:123,18,0	1/1:2,13:15:41.58:286,42,0	1/1:5,18:23:44.49:308,44,0	0/0:8,0:8:0.18:0,0,46	1/1:5,30:35:83.27:575,83,0	1/1:0,29:29:74.39:513,74,0	1/1:6,15:21:43.99:294,44,0	1/1:1,10:11:29.70:202,30,0	1/1:4,19:22:56.38:390,56,0	1/1:4,7:11:17.42:123,17,0	1/1:3,10:13:32.72:226,33,0	1/1:4,27:31:71.29:492,71,0	1/1:6,0:6:2.83:16,3,0	0/1:4,1:5:4.30:4,0,35	1/1:3,19:22:50.58:349,51,0	0/0:4,0:4:0:0,0,0
chr10	89708751	.	G	GATTT	2665.95	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=-5.090;DP=352;FS=4.184;HRun=0;HaplotypeScore=61.7394;InbreedingCoeff=0.8346;MQ=58.47;MQ0=0;MQRankSum=1.196;QD=44.43;ReadPosRankSum=1.034;VQSLOD=3.6173;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,8:15:18.06:449,18,0	1/1:5,0:5:9.03:155,9,0	0/0:14,0:8:12.04:0,12,189	0/0:18,0:11:11.71:0,12,202	0/0:10,0:10:24.08:0,24,407	0/0:24,0:24:57.17:0,57,934	0/0:7,0:7:15.05:0,15,243	0/0:45,0:45:99:0,102,1698	0/0:11,0:11:21.07:0,21,356	0/0:13,0:13:33.11:0,33,560	0/0:5,0:5:12.04:0,12,204	0/0:9,0:9:18.06:0,18,305	0/0:6,0:6:9.03:0,9,152	0/0:9,0:9:15.05:0,15,254	1/1:3,6:9:21.07:491,21,0	0/0:6,0:6:12.04:0,12,204	1/1:7,23:31:69.24:1722,69,0	0/0:24,0:24:60.21:0,60,1016	0/0:20,0:20:33.10:0,33,525	0/0:5,0:5:6.02:0,6,102	0/0:6,0:6:18.03:0,18,253	./.	0/0:2,0:2:3.01:0,3,51	0/0:4,0:3:9.03:0,9,153	0/0:13,0:13:33.11:0,33,557	0/0:16,0:16:36.11:0,36,575	0/0:14,0:14:27.09:0,27,458	0/0:11,0:11:33.11:0,33,551
chr10	89709023	.	GCTAAATCCCCAACCC	G	32.42	PASS	AC=2;AF=0.111;AN=18;BaseQRankSum=3.277;DP=107;FS=13.822;HRun=0;HaplotypeScore=113.3974;MQ=57.22;MQ0=10;MQRankSum=1.733;QD=4.63;ReadPosRankSum=-2.822;VQSLOD=0.9060;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:6,0:3:9.03:0,9,473	0/0:5,0:2:6.02:0,6,454	./.	./.	./.	./.	./.	0/0:19,0:19:57.20:0,57,3981	0/0:10,0:10:30.10:0,30,2266	./.	./.	./.	./.	0/0:15,0:15:45.15:0,45,3341	./.	./.	1/1:3,4:4:11.87:112,12,0	./.	./.	./.	./.	./.	0/0:14,0:14:33.11:0,33,2487	0/0:17,0:17:51.17:0,51,3668	./.	0/0:9,0:8:24.08:0,24,1815
chr10	89710193	.	CTTTT	C	2395.71	PASS	AB=0.600;AC=23;AF=0.411;AN=56;BaseQRankSum=4.701;DP=515;FS=0.000;HRun=16;HaplotypeScore=109.1063;InbreedingCoeff=0.8727;MQ=66.39;MQ0=3;MQRankSum=-5.657;QD=10.37;ReadPosRankSum=9.540;VQSLOD=-0.3232;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,1:43:8.34:94,8,0	0/0:3,0:6:5.10:0,5,52	0/0:18,0:17:30.06:0,30,507	0/0:18,0:15:15.14:0,15,258	1/1:5,9:17:17.75:178,18,0	0/0:12,0:18:35.99:0,36,410	0/0:8,0:18:35.94:0,36,436	0/0:20,0:25:38.82:0,39,470	1/1:6,9:15:20.87:255,21,0	0/0:25,0:24:39.10:0,39,667	0/0:15,0:16:40.66:0,41,704	1/1:8,8:18:23.02:253,23,0	1/1:5,8:13:20.86:276,21,0	1/1:4,8:12:4.56:257,5,0	0/1:8,2:24:13.85:89,0,14	0/0:22,0:22:39.05:0,39,759	1/1:9,1:24:18.72:80,19,0	1/1:8,12:20:26.83:355,27,0	0/0:14,0:18:41.92:0,42,502	0/0:6,0:14:26.91:0,27,308	0/0:9,0:14:29.99:0,30,378	1/1:3,10:13:17.79:236,18,0	1/1:5,8:13:20.76:254,21,0	1/1:5,12:17:20.67:287,21,0	0/0:11,0:12:27:0,27,365	0/0:21,0:22:43.36:0,43,713	0/0:16,0:22:51:0,51,604	0/0:8,0:8:18.03:0,18,280
chr10	89711059	.	ATG	A	3543.69	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.718;DP=656;FS=1.473;HRun=0;HaplotypeScore=79.5315;InbreedingCoeff=0.9974;MQ=74.28;MQ0=0;MQRankSum=-1.659;QD=33.43;ReadPosRankSum=3.244;VQSLOD=5.6050;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,31:35:75.72:1030,76,0	1/1:0,10:10:27.09:371,27,0	0/0:23,0:22:63.13:0,63,991	0/0:25,0:25:72.21:0,72,1135	0/0:27,0:27:75.24:0,75,1300	0/0:23,0:23:66.23:0,66,1163	0/0:28,0:28:78.20:0,78,1234	0/0:28,0:28:78.25:0,78,1316	0/0:13,0:13:39.12:0,39,651	0/0:24,0:24:72.25:0,72,1273	0/0:20,0:20:57.20:0,57,1008	0/0:23,0:23:57.19:0,57,992	0/0:12,0:12:33.09:0,33,555	0/0:22,0:22:63.20:0,63,1073	1/1:3,33:36:99:1359,99,0	0/0:24,0:24:72.23:0,72,1243	1/1:3,22:25:57.19:783,57,0	0/0:21,0:21:60.21:0,60,1054	0/0:23,0:23:63.22:0,63,1092	0/0:32,0:32:81.28:0,81,1427	0/0:19,0:19:48.16:0,48,844	0/0:13,0:13:39.09:0,39,626	0/0:16,0:16:42.14:0,42,744	0/0:17,0:17:51.17:0,51,888	0/0:31,0:31:90.29:0,90,1557	0/0:33,0:33:90.30:0,90,1559	0/0:46,0:46:99:0,138,2437	0/0:6,0:6:18.06:0,18,319
chr10	89712397	.	C	CT	2328.41	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-10.566;DP=711;FS=1.411;HRun=9;HaplotypeScore=79.5105;InbreedingCoeff=0.9135;MQ=78.65;MQ0=0;MQRankSum=1.054;QD=21.76;ReadPosRankSum=0.437;VQSLOD=4.3464;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,32:36:84.23:929,84,0	1/1:1,12:13:24.06:259,24,0	0/0:23,0:22:13.01:0,13,215	0/0:27,0:25:38.28:0,38,319	0/0:28,0:28:68.97:0,69,595	0/0:31,0:33:88.06:0,88,741	0/0:19,0:19:44.96:0,45,386	0/0:23,0:23:53.98:0,54,469	0/0:22,1:23:32.77:0,33,505	0/0:30,0:30:77.97:0,78,675	0/0:25,0:26:67.93:0,68,569	0/0:23,0:23:68.99:0,69,598	0/0:21,0:21:56.99:0,57,494	0/0:16,0:16:41.98:0,42,363	1/1:0,24:24:63.17:697,63,0	0/0:22,0:22:47.97:0,48,417	1/1:8,26:34:14.64:601,15,0	0/0:31,0:31:86.91:0,87,743	0/0:19,0:19:6.14:0,6,280	0/0:33,0:33:92.97:0,93,806	0/0:19,0:19:50.99:0,51,443	0/0:28,0:28:74.94:0,75,644	0/0:22,0:24:70.04:0,70,581	0/0:22,0:22:61.42:0,61,509	0/0:34,0:33:92.91:0,93,797	0/0:32,0:32:84.86:0,85,731	0/0:36,0:37:91.99:0,92,787	0/0:10,0:10:2.77:0,3,115
chr10	89712653	.	GTCCA	G	7968.97	PASS	AB=0.583;AC=21;AF=0.375;AN=56;BaseQRankSum=16.836;DP=749;FS=0.000;HRun=0;HaplotypeScore=137.0952;InbreedingCoeff=0.9147;MQ=56.90;MQ0=5;MQRankSum=-0.204;QD=26.65;ReadPosRankSum=2.932;VQSLOD=4.2368;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,34:46:60.21:1003,60,0	1/1:3,7:10:9.03:151,9,0	0/0:40,0:19:23.75:0,24,501	0/0:33,0:21:39.13:0,39,782	0/0:34,0:34:68.92:0,69,1597	1/1:21,0:21:48.15:776,48,0	1/1:27,0:27:36.12:586,36,0	1/1:34,0:32:51.16:808,51,0	0/0:31,0:31:78.27:0,78,1872	0/0:28,0:28:75.26:0,75,1791	0/0:26,0:26:54.19:0,54,1291	0/0:32,0:32:84.29:0,84,2003	0/0:21,0:21:51.18:0,51,1238	0/0:26,0:26:72.25:0,72,1753	0/1:8,20:28:38.10:515,0,38	0/0:19,0:19:48.16:0,48,1168	1/1:5,23:28:36.12:602,36,0	0/0:14,0:14:33.11:0,33,806	1/1:23,0:22:36.12:600,36,0	1/1:25,0:25:54.18:901,54,0	1/1:23,0:23:45.14:725,45,0	0/0:28,0:28:69.24:0,69,1558	0/0:18,0:18:33.11:0,33,737	0/0:28,0:28:69.23:0,69,1627	0/0:21,0:21:57.20:0,57,1371	0/0:34,0:34:99:0,102,2454	1/1:34,0:34:78.27:1303,78,0	0/0:17,0:17:36.12:0,36,823
chr10	89712666	.	TCCA	T	4144.05	PASS	AB=0.795;AC=13;AF=0.232;AN=56;BaseQRankSum=17.851;DP=764;FS=3.235;HRun=0;HaplotypeScore=140.4598;InbreedingCoeff=0.1125;MQ=55.64;MQ0=8;MQRankSum=0.825;QD=13.95;ReadPosRankSum=6.511;VQSLOD=3.0962;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:42:99:153,0,105	0/1:9,0:9:16.58:17,0,88	0/0:39,0:15:42.11:0,42,766	0/0:41,0:29:80.71:0,81,1477	0/0:34,0:34:74.38:0,74,1759	1/1:4,14:18:35.95:557,36,0	0/1:19,12:31:33.78:377,0,34	0/1:9,16:29:12.49:496,0,12	0/0:33,0:33:99:0,99,2192	0/0:32,0:32:96.33:0,96,2107	0/0:26,0:26:72.10:0,72,1526	0/0:32,0:32:96.33:0,96,2308	0/0:22,0:22:66.22:0,66,1452	0/0:30,0:30:90.29:0,90,2026	0/1:27,0:27:72.20:72,0,243	0/0:17,0:17:51.17:0,51,1222	0/1:29,0:28:81.46:81,0,196	0/0:15,0:15:42.14:0,42,964	0/1:7,11:19:71.76:402,0,72	0/1:11,19:30:14.20:623,0,14	0/1:11,15:26:47.43:484,0,47	0/0:28,0:28:84.29:0,84,1912	0/0:17,0:17:48.16:0,48,1064	0/0:28,0:28:78.22:0,78,1825	0/0:23,0:23:66.22:0,66,1518	0/0:38,0:38:99:0,114,2699	1/1:10,22:32:26.45:881,26,0	0/0:12,0:12:36.12:0,36,884
chr10	89712670	.	TC	T	1920.96	PASS	AB=0.748;AC=11;AF=0.196;AN=56;BaseQRankSum=18.337;DP=776;FS=8.076;HRun=2;HaplotypeScore=124.4456;InbreedingCoeff=0.1404;MQ=56.49;MQ0=7;MQRankSum=-0.833;QD=7.30;ReadPosRankSum=5.206;VQSLOD=0.7624;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:40,1:40:39.80:40,0,46	0/0:9,0:9:3.08:0,3,115	0/0:35,1:13:22.92:0,23,499	0/0:41,0:31:84.28:0,84,1185	0/0:35,0:35:74.49:0,74,1103	1/1:8,14:22:22.46:350,22,0	0/1:15,15:30:69.32:235,0,69	0/1:17,15:30:36.16:243,0,36	0/0:34,0:34:96.32:0,96,1412	0/0:32,0:32:96.32:0,96,1405	0/0:26,0:26:66.21:0,66,958	0/0:34,0:34:99:0,102,1499	0/0:22,0:22:66.22:0,66,968	0/0:28,0:28:84.28:0,84,1247	0/1:27,0:27:6.17:6,0,216	0/0:17,0:17:51.17:0,51,760	0/0:32,0:31:3.29:0,3,308	0/0:18,0:18:51.14:0,51,724	0/1:11,11:20:36.78:206,0,37	0/1:11,19:30:28.58:307,0,29	0/1:11,15:26:86.41:239,0,86	0/0:29,0:29:87.28:0,87,1263	0/0:15,0:15:42.14:0,42,623	0/0:28,0:28:81.27:0,81,1187	0/0:23,0:23:66.22:0,66,971	0/0:41,0:41:99:0,117,1734	1/1:11,22:33:4.91:446,5,0	0/0:13,0:13:39.13:0,39,572
chr10	89714276	.	A	AT	8483.61	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-13.118;DP=632;FS=1.839;HRun=0;HaplotypeScore=60.5819;InbreedingCoeff=0.9997;MQ=95.80;MQ0=0;MQRankSum=-7.391;QD=43.28;ReadPosRankSum=3.796;VQSLOD=5.4293;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,1730	0/0:9,0:9:27.09:0,27,378	0/0:33,0:33:97.87:0,98,1216	0/0:27,0:27:80.24:0,80,1054	1/1:0,22:22:60.20:958,60,0	0/0:15,0:15:45.15:0,45,628	0/0:22,0:22:63.21:0,63,879	0/0:28,0:28:81.26:0,81,1118	1/1:0,22:22:63.21:1005,63,0	0/0:29,0:29:87.28:0,87,1200	0/0:11,0:11:33.09:0,33,428	1/1:0,21:21:57.19:911,57,0	1/1:0,21:21:54.18:862,54,0	1/1:0,22:22:60.20:959,60,0	0/0:22,0:22:66.21:0,66,903	0/0:27,0:27:35.64:0,36,1045	0/0:24,0:24:72.22:0,72,989	1/1:1,19:20:51.17:815,51,0	0/0:20,0:20:60.19:0,60,823	0/0:16,0:16:45.15:0,45,628	0/0:49,0:49:99:0,144,1996	1/1:0,21:21:60.20:959,60,0	1/1:1,18:19:48.16:767,48,0	1/1:0,28:28:78.27:1247,78,0	0/0:12,0:12:33.11:0,33,460	0/0:15,0:15:45.10:0,45,606	0/0:22,0:22:66.21:0,66,904	0/0:11,0:11:33.11:0,33,461
chr10	89715184	.	G	GAA	2272.65	PASS	AB=0.842;AC=15;AF=0.268;AN=56;BaseQRankSum=-6.163;DP=482;FS=0.999;HRun=12;HaplotypeScore=89.5063;InbreedingCoeff=0.8224;MQ=76.59;MQ0=1;MQRankSum=-0.086;QD=15.15;ReadPosRankSum=-5.201;VQSLOD=1.5114;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:30:60.36:0,60,263	0/0:1,0:3:2.71:0,3,12	0/0:13,0:11:4.03:0,4,97	0/0:15,0:15:4.08:0,4,140	0/0:22,0:23:23.65:0,24,292	1/1:3,12:17:17.96:208,18,0	1/1:4,17:21:11.36:477,11,0	1/1:6,17:24:51.57:618,52,0	0/0:11,0:14:38.22:0,38,313	0/0:15,0:15:23.74:0,24,222	0/1:13,0:16:1.78:2,0,158	0/0:12,0:13:32.73:0,33,289	0/0:17,0:17:38.89:0,39,355	0/0:18,0:20:29.75:0,30,318	0/0:2,0:10:19.21:0,19,84	0/0:16,0:17:29.80:0,30,318	0/0:1,0:20:49.39:0,49,215	0/0:17,0:18:22.20:0,22,325	1/1:6,6:14:23.54:279,24,0	1/1:6,7:14:25.18:200,25,0	1/1:4,15:22:7.84:402,8,0	0/0:12,0:12:16.92:0,17,188	0/0:14,0:16:11.37:0,11,137	0/0:26,0:27:62.63:0,63,560	0/0:18,0:18:8.03:0,8,232	0/0:20,0:20:23.71:0,24,222	1/1:5,17:22:21.51:275,22,0	0/0:10,0:11:29.71:0,30,255
chr10	89715313	.	G	GT	7349.24	PASS	AB=0.606;AC=39;AF=0.696;AN=56;BaseQRankSum=-9.088;DP=430;FS=2.104;HRun=10;HaplotypeScore=41.2114;InbreedingCoeff=0.7825;MQ=70.07;MQ0=1;MQRankSum=1.975;QD=23.18;ReadPosRankSum=0.592;VQSLOD=5.4221;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:27:47.54:711,48,0	1/1:1,9:10:27.07:288,27,0	0/0:13,0:8:2.31:0,2,23	0/0:5,0:4:1.55:0,2,4	1/1:4,15:19:36.06:371,36,0	0/1:7,13:20:10.18:313,0,10	1/1:4,6:10:15.04:160,15,0	1/1:6,19:26:56.95:574,57,0	1/1:0,10:10:30.08:320,30,0	0/0:13,0:13:35.95:0,36,295	0/0:19,0:19:51.40:0,51,420	1/1:1,7:8:18.05:192,18,0	1/1:0,12:13:36.09:383,36,0	1/1:4,10:14:36.08:377,36,0	1/1:4,10:14:36.09:384,36,0	0/0:9,0:9:26.97:0,27,221	1/1:3,14:17:39.10:416,39,0	1/1:3,19:22:29.49:519,29,0	1/1:8,11:19:38.93:395,39,0	1/1:1,11:13:36.09:382,36,0	1/1:3,5:8:12.03:128,12,0	1/1:4,8:12:3.40:203,3,0	1/1:3,15:18:42.11:448,42,0	1/1:0,13:13:33.08:352,33,0	0/0:31,0:31:83.90:0,84,690	0/0:17,1:18:3.46:0,3,238	1/1:7,16:24:43.49:435,43,0	0/0:5,0:5:8.98:0,9,74
chr10	89715819	.	T	TAAAA	3228.29	PASS	AB=0.965;AC=27;AF=0.482;AN=56;BaseQRankSum=3.456;DP=512;FS=3.180;HRun=11;HaplotypeScore=122.1455;InbreedingCoeff=0.2849;MQ=70.32;MQ0=5;MQRankSum=-5.735;QD=10.12;ReadPosRankSum=-4.238;VQSLOD=-0.4091;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:15.69:0,16,128	0/1:5,0:5:7.15:7,0,29	0/1:22,0:12:19.03:19,0,30	0/0:23,0:12:3.78:0,4,39	1/1:20,0:21:33.48:356,33,0	0/0:8,0:8:14.43:0,14,92	0/1:10,0:10:34.18:34,0,45	0/1:29,0:27:70.25:172,0,70	1/1:11,1:14:29.87:394,30,0	0/0:37,0:36:83.60:0,84,1041	0/0:11,0:11:23.72:0,24,249	1/1:7,11:21:18.06:358,18,0	1/1:7,12:22:11.40:186,11,0	1/1:14,0:15:40.67:446,41,0	0/0:15,0:15:2.32:0,2,60	0/0:12,0:12:29.99:0,30,361	0/1:29,0:29:13.97:14,0,137	1/1:21,2:24:44.19:513,44,0	0/1:19,0:19:35.56:103,0,36	0/1:14,0:16:15.29:170,0,15	0/1:9,0:12:41.60:42,0,45	1/1:2,0:2:6.01:67,6,0	1/1:5,0:19:18.86:197,19,0	1/1:7,0:10:16.54:191,17,0	0/0:26,0:26:65.97:0,66,797	0/0:25,0:27:61.26:0,61,743	0/1:26,0:26:99:153,0,175	0/0:3,0:2:6:0,6,65
chr10	89715829	.	AAG	A	1620.83	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=5.711;DP=496;FS=8.078;HRun=0;HaplotypeScore=95.4840;InbreedingCoeff=0.0610;MQ=65.04;MQ0=5;MQRankSum=0.875;QD=4.84;ReadPosRankSum=-3.805;VQSLOD=0.5693;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,1:28:34.74:239,35,0	1/1:5,0:5:14.16:68,14,0	0/1:22,0:11:12.50:12,0,105	0/0:20,0:9:9.52:0,10,81	1/1:18,0:17:11.25:168,11,0	0/1:9,0:9:30.24:30,0,60	0/1:7,0:7:8.16:8,0,32	0/0:24,0:23:22.96:0,23,203	0/1:14,0:14:71.42:71,0,82	0/0:35,0:34:86.27:0,86,1439	0/0:11,0:11:29.97:0,30,360	0/1:20,0:20:25.58:31,0,26	0/1:17,0:17:5.50:6,0,12	0/1:20,0:19:51.88:122,0,52	1/1:15,2:16:20.33:159,20,0	0/0:12,0:12:36.09:0,36,499	1/1:30,2:32:59.58:340,60,0	0/1:27,0:26:57.53:170,0,58	0/1:14,0:14:39.84:41,0,40	0/1:16,0:16:45.93:91,0,46	0/1:15,0:15:41.37:68,0,41	0/1:3,0:3:7.90:44,0,8	1/1:17,0:17:5.60:68,6,0	1/1:8,0:8:4.36:56,4,0	0/0:27,0:27:81.20:0,81,1111	0/0:25,0:25:71.92:0,72,1003	0/1:26,0:26:13.71:14,0,196	0/0:7,0:6:17.95:0,18,165
chr10	89715830	.	AG	A	4556.06	PASS	AB=0.978;AC=42;AF=0.750;AN=56;BaseQRankSum=7.813;DP=501;FS=13.924;HRun=1;HaplotypeScore=78.9408;InbreedingCoeff=0.7958;MQ=64.93;MQ0=5;MQRankSum=-2.605;QD=11.93;ReadPosRankSum=-2.977;VQSLOD=1.4801;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:48.60:639,49,0	1/1:0,5:5:15.05:206,15,0	0/1:21,1:11:30.27:30,0,108	0/1:20,0:9:1.89:2,0,60	1/1:18,0:17:36.90:256,37,0	1/1:8,1:9:8.83:57,9,0	1/1:5,2:7:11.60:106,12,0	1/1:26,0:25:26.13:186,26,0	1/1:13,1:14:10.02:118,10,0	0/0:36,0:35:86.23:0,86,1133	0/0:11,0:11:29.96:0,30,315	1/1:19,0:19:17.26:90,17,0	1/1:17,1:18:11.30:90,11,0	1/1:20,0:19:24.34:236,24,0	1/1:3,14:17:26.09:299,26,0	0/0:12,0:12:36.10:0,36,422	1/1:2,30:32:63.14:816,63,0	1/1:26,1:26:44.85:326,45,0	1/1:12,3:15:30.40:249,30,0	1/1:17,0:17:28.68:196,29,0	1/1:14,1:15:23.49:203,23,0	1/1:3,0:3:6.47:54,6,0	1/1:16,0:16:19.41:103,19,0	1/1:8,0:8:20.20:127,20,0	0/0:27,0:27:81.20:0,81,938	0/0:25,0:25:60.95:0,61,799	1/1:24,2:26:17.05:166,17,0	0/0:8,0:7:20.94:0,21,182
chr10	89717878	.	A	AG	19745.36	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-9.987;DP=710;FS=4.145;HRun=2;HaplotypeScore=74.5546;InbreedingCoeff=0.9999;MQ=87.55;MQ0=0;MQRankSum=-6.213;QD=38.27;ReadPosRankSum=2.374;VQSLOD=5.6154;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,38:45:99:1547,108,0	1/1:1,17:18:50.53:696,51,0	0/0:36,0:36:98.33:0,98,1081	0/0:26,0:25:53.11:0,53,712	1/1:0,20:21:63.21:901,63,0	1/1:1,22:23:51.17:734,51,0	1/1:2,30:32:78.23:1101,78,0	1/1:0,30:30:87.27:1215,87,0	1/1:0,31:31:81.27:1166,81,0	0/0:30,0:30:87.27:0,87,1079	0/0:12,0:12:33.10:0,33,409	1/1:0,28:28:78.26:1123,78,0	1/1:1,22:23:66.22:950,66,0	1/1:1,23:24:63.08:906,63,0	1/1:1,24:25:66.22:951,66,0	0/0:27,0:27:81.24:0,81,993	1/1:2,30:32:84.28:1209,84,0	1/1:0,18:18:39.13:562,39,0	1/1:0,13:13:39.13:561,39,0	1/1:0,18:18:48.16:691,48,0	1/1:0,43:43:99:1728,120,0	1/1:0,23:23:69.23:991,69,0	1/1:0,14:14:36.12:518,36,0	1/1:1,27:28:72.24:1037,72,0	0/0:27,0:26:81.25:0,81,1004	0/0:25,0:25:75.24:0,75,930	1/1:0,27:26:81.27:1157,81,0	0/0:11,0:11:33.10:0,33,409
chr10	89718028	.	G	GC	11840.02	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=0.797;DP=681;FS=1.663;HRun=4;HaplotypeScore=100.6721;InbreedingCoeff=0.9998;MQ=85.11;MQ0=0;MQRankSum=0.721;QD=35.45;ReadPosRankSum=2.866;VQSLOD=4.7290;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,42:44:99:1517,111,0	1/1:0,15:15:36.12:492,36,0	0/0:23,0:23:62.29:0,62,635	0/0:20,0:20:44.99:0,45,459	1/1:0,30:30:87.16:1126,87,0	0/0:21,0:21:60.16:0,60,671	0/0:28,0:28:81.23:0,81,918	0/0:22,0:22:57.16:0,57,646	1/1:0,35:35:84.28:1146,84,0	0/0:25,0:25:66.18:0,66,740	0/0:19,0:19:54.15:0,54,612	1/1:0,23:23:66.22:903,66,0	1/1:2,27:29:75.25:1025,75,0	1/1:2,20:22:57.19:777,57,0	1/1:0,14:14:39.13:533,39,0	0/0:22,0:22:66.19:0,66,748	1/1:1,31:32:84.28:1147,84,0	1/1:1,35:36:87.29:1189,87,0	0/0:24,0:24:66.16:0,66,730	0/0:25,0:25:69.19:0,69,782	0/0:36,0:36:96.25:0,96,1071	1/1:0,20:20:57.18:759,57,0	1/1:1,18:19:51.17:692,51,0	1/1:2,13:15:39.13:533,39,0	0/0:22,0:22:63.15:0,63,694	0/0:32,0:32:87.23:0,87,978	0/0:19,0:18:54.14:0,54,603	0/0:9,0:9:27.08:0,27,306
chr10	89718132	.	ATT	A	11811.68	PASS	AB=0.947;AC=41;AF=0.732;AN=56;BaseQRankSum=10.763;DP=586;FS=0.820;HRun=10;HaplotypeScore=116.1380;InbreedingCoeff=0.9417;MQ=69.22;MQ0=4;MQRankSum=-3.341;QD=26.02;ReadPosRankSum=4.194;VQSLOD=4.4818;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,32:37:99:1113,102,0	1/1:3,5:8:21.05:234,21,0	0/0:27,0:13:24.21:0,24,203	0/1:17,0:12:0.45:0,0,250	1/1:5,29:34:78.15:858,78,0	1/1:2,13:16:45.09:487,45,0	1/1:3,19:22:45.12:501,45,0	1/1:4,29:35:93.15:1000,93,0	1/1:4,19:23:8.86:432,9,0	0/0:18,0:18:48.15:0,48,720	0/0:14,0:14:39.13:0,39,616	1/1:6,12:18:45.10:492,45,0	1/1:4,22:26:60.15:669,60,0	1/1:2,17:19:51.13:569,51,0	1/1:1,12:13:39.10:432,39,0	0/0:25,0:25:72.23:0,72,1111	1/1:1,20:21:42.11:468,42,0	1/1:2,20:22:57.15:635,57,0	1/1:4,15:19:45.10:500,45,0	1/1:4,17:23:54.09:587,54,0	1/1:1,26:27:71.98:765,72,0	1/1:0,17:17:48.13:531,48,0	1/1:0,11:11:30.08:332,30,0	1/1:0,19:19:45.12:502,45,0	0/0:14,0:14:33.11:0,33,514	0/0:23,0:23:60.20:0,60,947	1/1:5,20:25:66.07:705,66,0	0/0:10,0:10:30.10:0,30,476
chr10	89718213	.	T	TC	12075.51	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-6.257;DP=642;FS=5.545;HRun=2;HaplotypeScore=86.2146;InbreedingCoeff=0.9976;MQ=73.14;MQ0=0;MQRankSum=-3.040;QD=42.37;ReadPosRankSum=1.307;VQSLOD=4.5994;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,28:32:93.27:1432,93,0	1/1:0,16:16:48.16:763,48,0	0/0:13,0:12:36.12:0,36,501	0/0:22,0:21:63.16:0,63,841	0/0:20,0:20:51.16:0,51,696	1/1:1,15:16:36.12:575,36,0	1/1:1,26:27:60.20:959,60,0	1/1:2,24:26:72.25:1149,72,0	0/0:22,0:22:57.19:0,57,797	0/0:19,0:19:57.19:0,57,784	0/0:18,0:18:54.17:0,54,740	0/0:23,0:23:66.21:0,66,907	0/0:36,0:36:99:0,99,1361	0/0:15,0:15:42.13:0,42,566	1/1:0,20:19:54.18:863,54,0	0/0:19,0:19:57.19:0,57,795	1/1:2,32:34:93.32:1487,93,0	0/0:19,0:19:57.19:0,57,797	1/1:1,24:25:72.21:1108,72,0	1/1:0,19:19:45.15:719,45,0	1/1:2,43:45:99:1917,120,0	0/0:26,0:26:72.24:0,72,1004	0/0:12,0:12:33.11:0,33,462	0/0:43,0:43:99:0,114,1593	0/0:17,0:17:51.14:0,51,693	0/0:28,0:28:84.27:0,84,1160	1/1:0,25:25:69.24:1102,69,0	0/0:5,0:5:15.05:0,15,207
chr10	89718591	.	T	TTA	4716.20	PASS	AB=0.693;AC=41;AF=0.732;AN=56;BaseQRankSum=4.264;DP=637;FS=5.454;HRun=0;HaplotypeScore=120.7237;InbreedingCoeff=0.3527;MQ=60.89;MQ0=25;MQRankSum=-2.292;QD=9.18;ReadPosRankSum=-2.923;VQSLOD=3.8394;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:39.98:475,40,0	1/1:0,5:5:6.02:113,6,0	0/0:43,0:8:12.71:0,13,98	0/0:39,0:12:18.61:0,19,113	1/1:3,1:23:37.67:248,38,0	1/1:16,0:24:50.17:416,50,0	1/1:22,0:27:68.60:556,69,0	1/1:18,0:18:50.92:449,51,0	1/1:7,1:24:8.20:81,8,0	0/1:21,0:20:19.61:20,0,301	0/0:11,0:12:7.13:0,7,132	1/1:4,0:23:7.88:61,8,0	1/1:1,1:14:5.51:37,6,0	1/1:8,0:17:4.30:15,4,0	0/1:6,29:36:18.50:436,0,19	0/0:18,0:29:27.41:0,27,348	0/1:7,16:26:48.96:114,0,49	1/1:1,1:27:6.02:83,6,0	1/1:11,0:13:34.24:273,34,0	1/1:8,0:11:20.97:175,21,0	1/1:25,0:25:44.92:362,45,0	0/1:5,1:23:3.33:137,0,3	1/1:8,1:11:20.72:187,21,0	1/1:2,0:30:11.75:161,12,0	0/1:11,0:18:0.58:1,0,193	0/1:19,0:32:32.29:32,0,322	1/1:10,0:27:48.78:279,49,0	0/1:3,0:5:7.22:7,0,61
chr10	89719133	.	A	AATAT	1990.98	PASS	AB=0.885;AC=28;AF=0.636;AN=44;BaseQRankSum=8.125;DP=274;FS=0.000;HRun=0;HaplotypeScore=68.8268;InbreedingCoeff=0.5662;MQ=68.87;MQ0=1;MQRankSum=-6.767;QD=14.64;ReadPosRankSum=-2.389;VQSLOD=2.6772;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:17:13.66:133,0,14	1/1:5,0:5:12.04:188,12,0	1/1:12,0:5:0.45:1,0,0	0/0:12,0:6:5.18:0,5,38	1/1:0,3:5:9.02:169,9,0	./.	1/1:2,0:2:3.01:50,3,0	1/1:12,0:12:12.04:160,12,0	1/1:2,0:2:3:25,3,0	0/0:17,0:18:38.41:0,38,802	0/0:17,0:17:33.08:0,33,504	./.	1/1:4,0:4:6.01:86,6,0	1/1:3,2:5:6.02:147,6,0	1/1:7,0:7:14.84:205,15,0	0/0:12,0:12:30.08:0,30,457	1/1:26,0:28:30.88:475,31,0	0/1:14,1:17:12.36:304,0,12	1/1:4,0:4:3.01:48,3,0	./.	./.	1/1:2,3:5:6.02:138,6,0	./.	./.	0/0:22,0:22:60.18:0,60,965	0/0:23,0:24:60.17:0,60,884	1/1:7,0:7:3:25,3,0	0/0:11,0:11:21.03:0,21,301
chr10	89719145	.	T	TATATAC	3037.17	PASS	AB=0.952;AC=29;AF=0.558;AN=52;BaseQRankSum=5.023;DP=245;FS=3.589;HRun=0;HaplotypeScore=75.2920;InbreedingCoeff=0.4245;MQ=67.25;MQ0=0;MQRankSum=-2.652;QD=22.67;ReadPosRankSum=-3.654;VQSLOD=1.9924;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,7:19:3.91:542,0,4	1/1:1,4:5:12.04:410,12,0	1/1:6,0:3:1.36:3,1,0	0/0:7,0:6:5.32:0,5,47	0/1:7,0:7:33.28:58,0,33	1/1:2,0:2:2.99:24,3,0	1/1:4,0:4:5.99:48,6,0	1/1:9,0:9:18.89:130,19,0	0/0:1,0:1:2.90:0,3,16	0/0:19,0:19:54.09:0,54,1188	0/0:15,0:15:39.10:0,39,771	./.	0/1:4,0:4:10.99:19,0,11	1/1:2,0:2:6.01:62,6,0	1/1:3,4:7:21.04:514,21,0	0/0:14,0:14:33.08:0,33,652	1/1:16,10:27:43.52:1082,44,0	0/1:19,0:18:9.64:10,0,158	1/1:7,0:7:17.93:143,18,0	1/1:3,0:3:2.99:24,3,0	1/1:2,0:2:2.99:24,3,0	0/1:4,0:4:15.91:70,0,16	0/0:2,0:2:0:0,0,0	./.	0/0:20,0:20:60.21:0,60,1353	0/0:25,0:25:69.20:0,69,1332	1/1:4,0:4:5.99:49,6,0	0/0:8,0:8:24.06:0,24,460
chr10	89719147	.	TAC	T	156.48	PASS	AB=0.887;AC=12;AF=0.222;AN=54;BaseQRankSum=3.262;DP=249;FS=0.948;HRun=0;HaplotypeScore=65.0574;InbreedingCoeff=0.2610;MQ=67.16;MQ0=0;MQRankSum=-0.533;QD=2.27;ReadPosRankSum=-4.278;VQSLOD=0.5083;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,3:19:30.98:0,31,259	0/0:5,0:5:11.98:0,12,103	0/0:6,0:3:1.07:0,1,3	0/0:7,0:6:5.29:0,5,42	0/1:6,2:8:6.51:54,0,7	0/0:2,0:2:2.99:0,3,24	0/0:4,0:4:6:0,6,70	0/0:9,0:9:23.92:0,24,287	0/1:1,0:1:0:0,0,0	0/0:19,0:19:57.17:0,57,1003	0/0:16,0:16:42.09:0,42,675	1/1:1,0:1:2.92:17,3,0	1/1:4,0:4:5.92:42,6,0	0/0:2,0:2:4.99:0,5,18	0/0:6,1:7:17.75:0,18,134	0/0:14,0:14:39.03:0,39,592	0/1:23,3:26:37.91:38,0,313	0/1:15,4:18:54.23:77,0,54	0/0:7,0:7:21:0,21,227	0/0:3,0:3:2.99:0,3,24	0/0:2,0:2:2.99:0,3,24	0/1:3,1:4:2.62:21,0,3	1/1:1,1:2:3:25,3,0	./.	0/0:20,0:20:60.21:0,60,1135	0/0:25,0:25:59.26:0,59,1161	0/1:4,0:4:17.99:19,0,18	0/0:10,0:10:30.04:0,30,452
chr10	89719168	.	T	TA	2748.01	PASS	AC=24;AF=0.444;AN=54;BaseQRankSum=3.200;DP=286;FS=7.206;HRun=9;HaplotypeScore=59.0811;InbreedingCoeff=0.8913;MQ=66.46;MQ0=1;MQRankSum=-5.433;QD=21.64;ReadPosRankSum=-2.124;VQSLOD=3.5496;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,19:24:52.94:478,53,0	1/1:1,7:8:21.06:230,21,0	0/0:10,1:8:14.98:0,15,100	0/0:3,0:3:2.97:0,3,20	1/1:1,10:11:27.01:283,27,0	0/0:5,0:5:14.95:0,15,120	0/0:4,0:4:11.95:0,12,97	0/0:11,0:11:29.99:0,30,260	1/1:2,0:2:6:58,6,0	0/0:20,0:20:44.96:0,45,385	0/0:14,0:14:32.91:0,33,277	1/1:0,1:1:3.01:33,3,0	1/1:0,6:6:12.03:132,12,0	1/1:1,3:4:9.02:100,9,0	1/1:2,5:7:15.04:166,15,0	0/0:12,0:12:29.98:0,30,260	1/1:4,27:31:71.20:756,71,0	1/1:9,11:20:36.69:413,37,0	0/0:14,0:14:26.95:0,27,230	0/0:4,0:4:12:0,12,104	0/0:5,0:5:12:0,12,104	1/1:1,5:6:14.96:150,15,0	1/1:0,6:6:15.04:161,15,0	./.	0/0:19,0:19:44.97:0,45,387	0/0:23,0:23:59.85:0,60,509	0/0:4,0:4:11.91:0,12,90	0/0:10,0:10:26.98:0,27,234
chr10	89719740	.	T	TAAA	4964.42	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-7.388;DP=729;FS=0.445;HRun=3;HaplotypeScore=98.0433;InbreedingCoeff=0.9994;MQ=84.78;MQ0=0;MQRankSum=-4.032;QD=55.16;ReadPosRankSum=0.288;VQSLOD=4.4484;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:35:93.28:2031,93,0	1/1:1,8:11:24.08:514,24,0	0/0:25,0:25:72.24:0,72,1120	0/0:23,0:23:57.16:0,57,885	0/0:35,0:35:99:0,99,1579	0/0:25,0:25:72.24:0,72,1147	0/0:30,0:30:87.26:0,87,1338	0/0:23,0:23:66.22:0,66,1054	0/0:26,0:26:78.27:0,78,1245	0/0:27,0:27:69.23:0,69,1103	0/0:22,0:22:66.20:0,66,1006	0/0:38,0:38:99:0,108,1722	0/0:26,0:26:72.24:0,72,1152	0/0:26,0:26:72.24:0,72,1152	1/1:3,21:24:54.18:1166,54,0	0/0:32,0:32:90.27:0,90,1389	1/1:2,18:20:57.20:1254,57,0	0/0:18,0:18:45.12:0,45,686	0/0:31,0:31:93.32:0,93,1486	0/0:36,0:36:99:0,99,1537	0/0:28,0:28:78.25:0,78,1224	0/0:33,0:33:96.33:0,96,1530	0/0:26,0:25:69.23:0,69,1101	0/0:15,0:15:42.14:0,42,672	0/0:21,0:21:63.21:0,63,1008	0/0:31,0:31:81.26:0,81,1272	0/0:24,0:24:69.17:0,69,1052	0/0:18,0:18:54.18:0,54,864
chr10	89719949	.	T	TGTGCGTGC	12755.70	PASS	AB=0.777;AC=26;AF=0.464;AN=56;BaseQRankSum=0.147;DP=720;FS=0.362;HRun=0;HaplotypeScore=194.1549;InbreedingCoeff=0.8399;MQ=72.36;MQ0=0;MQRankSum=-12.006;QD=36.44;ReadPosRankSum=4.338;VQSLOD=4.0997;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:34:50.93:420,51,0	1/1:2,0:12:26.80:222,27,0	0/0:26,0:25:51.16:0,51,1151	0/0:25,0:25:44.82:0,45,1028	1/1:9,12:23:17.75:755,18,0	0/0:18,0:18:39.12:0,39,955	0/0:33,0:33:78.25:0,78,1846	0/0:31,0:31:45.12:0,45,996	1/1:9,20:32:54.19:2254,54,0	0/0:22,0:22:54.18:0,54,1302	0/0:17,0:17:45.15:0,45,1165	1/1:16,25:43:57.05:2384,57,0	1/1:9,10:22:27.09:1123,27,0	1/1:13,22:38:54.19:2261,54,0	1/1:8,0:39:74.91:622,75,0	0/1:17,1:18:89.91:90,0,783	0/1:6,0:17:42.90:238,0,43	1/1:7,6:14:18.06:759,18,0	0/0:28,0:28:53.90:0,54,1161	0/0:15,0:15:42.14:0,42,1104	0/0:75,0:75:99:0,187,4587	1/1:9,8:18:9.03:378,9,0	1/1:5,6:14:11.65:494,12,0	1/1:13,12:26:18.06:756,18,0	0/0:22,0:22:54.19:0,54,1355	0/0:17,0:17:48.16:0,48,1188	0/0:21,0:21:39.13:0,39,983	0/0:20,0:20:51.17:0,51,1261
chr10	89720497	.	T	TA	5418.17	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-14.928;DP=626;FS=9.119;HRun=6;HaplotypeScore=65.4167;InbreedingCoeff=0.9890;MQ=80.48;MQ0=0;MQRankSum=-3.201;QD=34.96;ReadPosRankSum=-1.962;VQSLOD=3.4770;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,117,1185	0/0:11,0:11:33.08:0,33,337	0/0:18,0:18:36.06:0,36,358	0/0:15,0:15:29.90:0,30,264	0/0:33,0:33:96.22:0,96,979	1/1:0,22:22:63.20:793,63,0	1/1:0,19:19:57.18:717,57,0	1/1:3,24:27:72.23:906,72,0	0/0:26,0:26:66.12:0,66,666	0/0:21,0:21:54.11:0,54,544	0/0:15,0:15:42.10:0,42,429	0/0:19,0:19:51.10:0,51,514	0/0:25,0:25:66.11:0,66,658	0/0:27,0:27:69.13:0,69,696	0/0:28,0:28:81.17:0,81,819	0/0:21,0:21:60.12:0,60,605	0/0:23,0:23:60.13:0,60,612	0/0:25,0:25:66.05:0,66,645	1/1:0,22:22:66.20:816,66,0	1/1:3,20:23:60.19:755,60,0	1/1:1,9:10:27.09:339,27,0	0/0:30,0:30:87.18:0,87,880	0/0:13,0:13:33.07:0,33,337	0/0:16,0:16:48.07:0,48,478	0/0:15,0:15:45.09:0,45,453	0/0:42,0:42:99:0,120,1213	1/1:2,30:32:87.28:1093,87,0	0/0:4,0:4:9.02:0,9,92
chr10	89721880	.	GGGCGA	G	12361.01	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=17.534;DP=755;FS=4.521;HRun=0;HaplotypeScore=148.3047;InbreedingCoeff=0.9969;MQ=78.04;MQ0=0;MQRankSum=-6.005;QD=51.29;ReadPosRankSum=5.774;VQSLOD=5.0833;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,4479	0/0:15,0:15:45.15:0,45,1342	0/0:20,0:20:14.38:0,14,1055	0/0:23,0:22:42:0,42,1527	1/1:1,17:18:42.14:895,42,0	0/0:27,0:27:78.27:0,78,2438	0/0:34,0:34:99:0,99,2977	0/0:24,0:24:69.24:0,69,2135	1/1:3,32:35:81.27:1725,81,0	0/0:28,0:28:75.22:0,75,2251	0/0:18,0:18:51.18:0,51,1595	1/1:4,38:42:99:2108,99,0	1/1:3,21:24:63.22:1342,63,0	1/1:1,30:31:87.30:1850,87,0	0/0:35,0:35:99:0,102,3164	0/0:28,0:28:81.28:0,81,2533	0/0:35,0:35:99:0,105,3133	1/1:1,23:24:69.24:1445,69,0	0/0:10,0:10:30.10:0,30,910	0/0:16,0:16:48.16:0,48,1499	0/0:49,0:49:99:0,141,4292	1/1:5,17:22:42.14:894,42,0	1/1:1,12:13:33.11:702,33,0	1/1:3,29:32:66.23:1399,66,0	0/0:23,0:23:69.24:0,69,2124	0/0:36,0:36:99:0,102,3105	0/0:32,0:32:93.31:0,93,2799	0/0:11,0:11:33.11:0,33,1033
chr10	89724307	.	AT	A	2128.48	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.679;DP=592;FS=1.654;HRun=4;HaplotypeScore=61.9525;InbreedingCoeff=0.9230;MQ=93.49;MQ0=0;MQRankSum=-0.846;QD=29.98;ReadPosRankSum=2.264;VQSLOD=3.9766;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,1760	1/1:0,4:4:12.04:144,12,0	0/0:30,0:30:80.98:0,81,909	0/0:24,0:24:53.90:0,54,673	0/0:17,0:17:48.09:0,48,645	0/0:23,0:23:66.16:0,66,866	0/0:28,0:28:81.25:0,81,1104	0/0:24,0:24:63.21:0,63,882	0/0:26,0:26:69.23:0,69,965	0/0:14,0:14:36.11:0,36,487	0/0:5,0:5:15.05:0,15,207	0/0:25,0:25:72.22:0,72,975	0/0:21,0:21:54.16:0,54,722	0/0:19,0:19:54.14:0,54,732	1/1:0,24:24:63.19:756,63,0	0/0:23,0:23:63.21:0,63,881	1/1:3,40:43:99:1368,114,0	0/0:22,0:22:66.19:0,66,899	0/0:19,0:19:54.18:0,54,756	0/0:11,0:11:33.11:0,33,462	0/0:43,0:43:99:0,123,1687	0/0:11,0:11:33.11:0,33,462	0/0:15,0:15:45.15:0,45,630	0/0:27,0:27:78.23:0,78,1057	0/0:7,0:7:21.07:0,21,294	0/0:22,0:22:63.20:0,63,868	0/0:21,0:21:60.16:0,60,818	0/0:1,0:1:3.01:0,3,42
chr10	89724489	.	AG	A	341.71	PASS	AB=0.891;AC=10;AF=0.179;AN=56;BaseQRankSum=1.611;DP=242;FS=2.778;HRun=9;HaplotypeScore=52.7037;InbreedingCoeff=0.4629;MQ=72.96;MQ0=1;MQRankSum=-0.931;QD=5.10;ReadPosRankSum=-0.131;VQSLOD=0.0315;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:3,10:13:16.58:119,0,17	1/1:0,5:5:9:82,9,0	0/1:11,0:10:1.69:2,0,132	0/0:15,0:14:17.84:0,18,166	0/0:5,0:5:2.99:0,3,24	0/1:12,0:12:0.46:0,0,94	0/0:15,0:15:30.09:0,30,344	0/0:6,0:7:11.99:0,12,123	0/0:10,0:10:24.07:0,24,277	0/0:9,0:9:9.98:0,10,150	0/1:10,0:10:3.05:3,0,30	0/0:8,0:8:18.05:0,18,208	0/0:7,0:7:11.83:0,12,138	0/0:11,0:11:18.05:0,18,208	1/1:2,8:10:15:137,15,0	0/0:12,0:12:33.01:0,33,351	1/1:0,6:6:15.01:137,15,0	0/0:10,0:9:15.04:0,15,173	0/0:7,0:7:9.03:0,9,104	0/0:3,0:3:9.01:0,9,95	0/0:9,0:9:12:0,12,138	0/0:9,0:9:8.98:0,9,89	0/0:7,0:7:8.82:0,9,96	0/0:7,0:7:9.01:0,9,94	0/0:6,0:6:14.63:0,15,149	0/0:7,0:7:17.72:0,18,181	0/0:8,1:9:15.03:0,15,173	0/0:2,0:2:6.02:0,6,69
chr10	89724985	.	C	CGTGTGT	5544.03	PASS	AB=0.807;AC=38;AF=0.731;AN=52;BaseQRankSum=-0.896;DP=598;FS=13.734;HRun=0;HaplotypeScore=156.6439;InbreedingCoeff=0.5660;MQ=58.86;MQ0=9;MQRankSum=-4.791;QD=12.27;ReadPosRankSum=0.524;VQSLOD=3.1128;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,3:47:6.02:92,6,0	1/1:7,0:7:2.99:24,3,0	./.	./.	1/1:18,0:18:6.02:117,6,0	1/1:20,0:19:15.52:293,16,0	1/1:19,0:26:5.54:156,6,0	1/1:18,0:18:18.05:252,18,0	1/1:11,11:24:19.28:610,19,0	0/0:12,0:12:6.02:0,6,99	0/0:13,0:13:8.07:0,8,68	1/1:8,9:25:20.10:466,20,0	1/1:9,6:14:11.30:279,11,0	1/1:18,5:24:5.42:193,5,0	1/1:24,0:24:12.03:260,12,0	0/0:16,0:16:30.09:0,30,543	0/1:33,0:33:37.51:276,0,38	1/1:16,1:27:15.05:366,15,0	1/1:20,0:25:27.09:567,27,0	1/1:4,0:9:0.67:37,1,0	1/1:29,0:27:36.01:646,36,0	1/1:11,4:15:8.97:215,9,0	1/1:12,0:12:6.02:92,6,0	0/1:13,15:34:42.90:406,0,43	0/0:7,0:7:15.01:0,15,244	0/0:22,0:23:12.93:0,13,201	1/1:13,0:13:12.03:198,12,0	0/0:8,0:7:9.03:0,9,183
chr10	89725098	.	CTT	C	3837.15	PASS	AB=0.821;AC=40;AF=0.714;AN=56;BaseQRankSum=4.038;DP=459;FS=3.457;HRun=14;HaplotypeScore=69.0849;InbreedingCoeff=0.6127;MQ=65.43;MQ0=6;MQRankSum=1.497;QD=11.35;ReadPosRankSum=5.542;VQSLOD=2.5001;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,14:35:41.45:341,41,0	1/1:3,3:6:11.99:109,12,0	0/1:27,0:11:10.30:10,0,87	0/1:28,0:16:8.17:8,0,82	1/1:3,11:16:4.56:200,5,0	1/1:3,9:12:0.73:171,1,0	1/1:4,13:18:29.92:323,30,0	0/1:10,8:18:3.87:138,0,4	1/1:6,2:8:18:166,18,0	0/0:23,0:24:41.60:0,42,503	0/0:19,0:18:26.57:0,27,339	1/1:2,7:9:21.02:194,21,0	1/1:2,0:2:2.91:17,3,0	1/1:2,10:12:17.93:166,18,0	1/1:3,5:8:16.81:136,17,0	0/0:16,0:18:41.31:0,41,494	1/1:7,16:25:55.85:500,56,0	1/1:4,18:23:35.63:355,36,0	1/1:4,8:13:11.20:193,11,0	1/1:5,4:9:8.98:82,9,0	1/1:5,9:15:14.96:138,15,0	1/1:3,9:12:20.96:193,21,0	0/1:4,8:12:1.53:93,0,2	1/1:5,6:11:23.99:218,24,0	0/0:18,0:19:44.53:0,45,532	0/0:21,0:25:56.87:0,57,671	1/1:5,11:16:8.96:83,9,0	0/0:16,0:16:45.14:0,45,602
chr10	89725110	.	TTTC	T	1350.88	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=4.191;DP=494;FS=21.493;HRun=0;HaplotypeScore=86.2208;InbreedingCoeff=0.4242;MQ=60.28;MQ0=12;MQRankSum=-3.957;QD=10.47;ReadPosRankSum=-0.249;VQSLOD=1.5709;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:20,13:33:24.46:478,24,0	1/1:5,0:5:13.48:78,13,0	0/0:42,0:12:9.92:0,10,88	0/0:36,0:13:17.93:0,18,173	0/1:17,0:17:0.08:0,0,91	0/0:15,0:15:24.03:0,24,110	0/0:21,0:20:41.78:0,42,205	0/0:11,0:11:3.66:0,4,73	0/0:12,0:11:7.07:0,7,66	0/0:19,0:19:40.69:0,41,457	0/0:13,0:12:1.94:0,2,308	0/0:11,0:10:2.67:0,3,37	0/1:8,0:7:13.74:14,0,58	0/0:15,0:15:23.53:0,24,127	1/1:9,0:9:23.04:223,23,0	0/0:18,0:18:44.96:0,45,568	1/1:34,1:34:82.98:687,83,0	0/0:22,0:22:13.56:0,14,46	0/1:14,0:13:20.78:21,0,40	0/1:8,0:7:9.33:9,0,13	0/0:13,0:13:0.22:0,0,80	0/0:13,0:13:3.32:0,3,66	0/0:12,0:11:6.45:0,6,80	0/0:13,0:13:6.06:0,6,61	0/0:21,0:20:49.05:0,49,631	0/0:25,0:25:58.52:0,59,803	0/0:14,0:14:7.95:0,8,104	0/0:19,0:18:53.86:0,54,711
chr10	89725111	.	TTC	T	1375.27	PASS	AB=0.984;AC=27;AF=0.482;AN=56;BaseQRankSum=10.437;DP=494;FS=40.502;HRun=0;HaplotypeScore=78.5062;InbreedingCoeff=-0.1517;MQ=60.24;MQ0=12;MQRankSum=-0.086;QD=3.61;ReadPosRankSum=6.871;VQSLOD=0.0051;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:28.99:306,29,0	1/1:5,0:5:13.44:65,13,0	0/1:42,0:12:12.60:13,0,64	0/1:36,0:13:4.50:5,0,94	0/1:17,0:17:36.77:61,0,37	0/1:14,0:14:6.13:6,0,53	0/1:21,0:20:22.96:23,0,96	0/1:11,0:11:17.19:17,0,43	0/1:12,0:11:19.30:19,0,44	0/0:19,0:19:43.52:0,44,396	0/0:13,0:12:1.85:0,2,241	0/1:10,1:10:11.46:74,0,11	0/1:8,0:7:13.96:14,0,57	0/1:15,0:15:10.89:11,0,63	1/1:9,0:9:22.87:156,23,0	0/0:18,0:18:28.59:0,29,413	1/1:36,0:35:85.50:507,86,0	1/1:21,1:22:24.06:109,24,0	0/1:14,0:13:18.56:19,0,29	0/1:7,1:7:5.49:32,0,5	0/1:13,0:13:16.29:16,0,41	0/1:13,0:13:20.58:21,0,36	0/1:13,0:12:15.54:16,0,44	0/1:12,1:13:21.31:58,0,21	0/0:20,0:19:49.85:0,50,469	0/0:24,0:24:54.43:0,54,638	0/1:15,0:15:2.86:3,0,87	0/0:19,0:18:53.84:0,54,587
chr10	89725113	.	CT	C	1143.88	PASS	AB=0.988;AC=10;AF=0.179;AN=56;BaseQRankSum=5.152;DP=493;FS=10.014;HRun=14;HaplotypeScore=74.8145;InbreedingCoeff=0.6629;MQ=60.20;MQ0=12;MQRankSum=-4.315;QD=8.54;ReadPosRankSum=1.317;VQSLOD=2.1516;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,18:33:40.26:334,40,0	1/1:3,3:6:5.98:54,6,0	0/1:41,0:12:17.77:18,0,61	0/0:34,1:14:7.86:0,8,95	0/0:17,0:17:30.96:0,31,285	0/0:15,0:14:33.09:0,33,360	0/0:22,0:21:59.61:0,60,607	0/0:10,0:10:15.04:0,15,170	0/0:12,0:11:17.83:0,18,167	0/0:16,0:17:26.91:0,27,291	0/0:13,0:12:12.03:0,12,130	0/0:12,0:11:28.71:0,29,257	0/1:9,0:8:12.24:12,0,110	0/0:14,0:14:30.06:0,30,322	1/1:1,8:9:21:184,21,0	0/0:18,0:18:36.08:0,36,392	1/1:14,21:34:80.80:703,81,0	0/0:22,0:22:41.25:0,41,391	0/0:12,0:12:18.03:0,18,188	0/0:7,0:6:8.61:0,9,70	0/0:13,0:13:18.05:0,18,197	0/0:12,1:13:3.53:0,4,269	0/0:13,0:12:25.29:0,25,249	0/0:13,0:13:28.30:0,28,280	0/0:20,0:19:36.03:0,36,386	0/0:24,0:24:21.42:0,21,451	0/0:16,0:16:24.04:0,24,252	0/0:19,0:18:42.12:0,42,485
chr10	89725221	.	CG	C	1705.10	PASS	AB=0.929;AC=24;AF=0.444;AN=54;BaseQRankSum=-0.973;DP=327;FS=18.918;HRun=11;HaplotypeScore=43.6298;InbreedingCoeff=0.4199;MQ=77.51;MQ0=0;MQRankSum=-1.057;QD=8.97;ReadPosRankSum=3.117;VQSLOD=0.6046;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:18:2.84:0,3,14	0/0:3,0:4:3.73:0,4,16	0/0:12,0:10:9.97:0,10,60	0/1:20,0:13:8.07:8,0,22	1/1:4,6:10:14.97:123,15,0	0/0:5,0:9:11.84:0,12,101	0/1:17,0:20:2.40:2,0,121	0/0:4,0:5:2.84:0,3,14	1/1:2,7:10:23:178,23,0	0/1:10,1:11:12.78:13,0,66	0/0:10,0:10:15.02:0,15,152	1/1:3,9:15:33.08:239,33,0	1/1:2,7:9:17.98:148,18,0	1/1:3,12:16:6:245,6,0	0/0:5,0:9:11.53:0,12,75	0/1:9,1:10:9.62:10,0,99	0/0:27,1:31:19.13:0,19,249	1/1:3,21:25:55.97:449,56,0	0/0:8,0:11:11.66:0,12,80	./.	0/1:6,0:14:12.95:13,0,41	1/1:1,2:3:5.99:49,6,0	1/1:3,2:5:5.99:49,6,0	1/1:1,15:16:41.94:345,42,0	0/0:9,0:9:3.82:0,4,81	0/0:9,0:9:12.03:0,12,128	0/0:4,0:4:6.15:0,6,30	0/1:4,2:5:18.63:19,0,26
chr10	89725653	.	G	GTCCC	3788.25	PASS	AB=0.980;AC=19;AF=0.339;AN=56;BaseQRankSum=11.063;DP=743;FS=1.712;HRun=0;HaplotypeScore=198.9394;InbreedingCoeff=-0.3958;MQ=52.31;MQ0=5;MQRankSum=-10.280;QD=7.05;ReadPosRankSum=6.098;VQSLOD=2.4719;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:46,0:46:99:115,0,414	0/1:12,0:12:28.81:29,0,196	0/0:22,0:16:36.90:0,37,390	0/0:26,0:20:23.36:0,23,396	0/0:10,0:10:2.99:0,3,25	0/1:28,1:29:31.18:327,0,31	0/1:40,0:40:99:450,0,114	0/1:23,0:23:65.63:286,0,66	0/1:34,0:34:35.95:164,0,36	0/0:26,0:26:59.71:0,60,742	0/0:17,0:17:47.99:0,48,660	0/1:34,0:34:11.86:353,0,12	0/1:32,0:32:17.95:100,0,18	0/1:40,0:40:57.31:230,0,57	0/1:44,0:44:66.41:66,0,382	0/0:33,0:33:89.97:0,90,1271	0/1:30,0:30:27.63:28,0,391	0/1:18,0:18:24.95:124,0,25	0/1:22,0:20:41.04:334,0,41	0/1:6,2:8:21.24:150,0,21	0/1:58,0:58:44.99:104,0,45	1/1:9,0:9:3.01:38,3,0	0/0:14,0:14:3.53:0,4,51	0/1:25,0:25:7.95:147,0,8	0/0:23,0:23:66.01:0,66,986	0/0:28,0:28:68.85:0,69,884	0/1:29,4:32:41.97:744,0,42	0/0:7,0:7:17.96:0,18,203
chr10	89725658	.	T	TCCCTCCGTCTGTCTGTCTGC	23475.22	PASS	AB=0.583;AC=35;AF=0.625;AN=56;BaseQRankSum=7.644;DP=835;FS=0.731;HRun=0;HaplotypeScore=319.8577;InbreedingCoeff=0.6336;MQ=57.76;MQ0=5;MQRankSum=-14.176;QD=36.51;ReadPosRankSum=5.099;VQSLOD=3.0157;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:60:99:298,0,510	0/1:6,0:13:46.18:46,0,215	0/0:26,0:21:41.16:0,41,1579	0/0:27,0:21:42.86:0,43,1137	0/1:2,5:22:0:0,0,0	1/1:29,0:30:35.49:1902,35,0	1/1:39,0:39:96.53:2723,97,0	1/1:25,0:25:49.58:1236,50,0	1/1:1,20:38:17.22:1489,17,0	0/0:27,0:27:78.09:0,78,2559	0/0:17,0:17:48.16:0,48,1954	1/1:5,23:43:33.11:2682,33,0	1/1:1,14:34:11.79:909,12,0	1/1:2,26:45:30.10:2142,30,0	0/1:14,0:47:82.63:83,0,696	0/0:36,0:36:99:0,102,3733	0/1:10,0:37:99:175,0,329	1/1:2,10:24:18.06:1303,18,0	1/1:23,0:21:57.04:1591,57,0	1/1:6,0:8:21.03:690,21,0	1/1:60,0:60:39.12:856,39,0	1/1:1,7:16:3.01:290,3,0	1/1:13,0:13:12.41:333,12,0	1/1:6,12:33:21.07:1435,21,0	0/0:23,0:23:69.24:0,69,2970	0/0:30,0:30:84.27:0,84,2695	1/1:28,0:32:81.46:3292,81,0	0/0:6,0:6:18.06:0,18,423
chr10	89726621	.	CAAAT	C	1718.95	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=8.523;DP=622;FS=5.145;HRun=0;HaplotypeScore=82.4365;InbreedingCoeff=0.9901;MQ=50.23;MQ0=34;MQRankSum=-1.967;QD=22.32;ReadPosRankSum=1.634;VQSLOD=3.1645;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:41.82:611,42,0	1/1:1,8:9:17.81:335,18,0	0/0:16,0:5:15.02:0,15,237	./.	0/0:31,0:31:66.23:0,66,1750	0/0:15,0:14:30.10:0,30,796	0/0:21,0:20:30.09:0,30,718	0/0:28,0:23:69.24:0,69,1801	0/0:25,0:24:45.07:0,45,1074	0/0:20,0:19:54.18:0,54,1381	0/0:21,0:21:51.11:0,51,1283	0/0:24,0:20:42.14:0,42,1115	0/0:22,0:22:45.09:0,45,1124	0/0:15,0:13:20.94:0,21,462	1/1:0,20:19:32.94:484,33,0	0/0:29,0:26:42.14:0,42,1086	1/1:3,18:18:24.08:447,24,0	0/0:25,0:24:27.09:0,27,718	0/0:23,0:21:63.22:0,63,1584	0/0:21,0:21:51.16:0,51,1272	0/0:19,0:18:24.07:0,24,582	0/0:27,0:27:66.22:0,66,1654	0/0:19,0:19:54.19:0,54,1404	0/0:23,0:20:33.10:0,33,808	0/0:24,0:24:66.23:0,66,1754	0/0:25,0:25:75.26:0,75,1947	0/0:44,0:41:63.67:0,64,1539	0/0:19,0:16:45.15:0,45,1196
chr10	89727721	.	CA	C	1090.44	PASS	AB=0.984;AC=13;AF=0.241;AN=54;BaseQRankSum=2.955;DP=344;FS=17.606;HRun=1;HaplotypeScore=73.8008;InbreedingCoeff=0.4184;MQ=45.13;MQ0=26;MQRankSum=-2.699;QD=8.94;ReadPosRankSum=3.759;VQSLOD=-0.2975;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:16.57:0,17,159	0/0:3,0:3:2.13:0,2,21	0/0:5,0:3:6.49:0,6,72	0/0:14,0:6:6.49:0,6,76	0/0:18,0:17:2.98:0,3,38	1/1:12,2:12:2.17:144,2,0	0/1:19,1:19:40.91:142,0,41	1/1:11,0:9:19.51:172,20,0	0/0:9,0:8:6.38:0,6,57	0/1:15,0:15:11.31:11,0,435	0/0:9,0:8:0.47:0,0,1	0/0:15,1:16:19.67:0,20,270	0/0:19,0:19:9.96:0,10,226	0/0:7,0:6:6.02:0,6,86	0/0:5,0:5:3.01:0,3,38	0/0:18,0:17:20.58:0,21,254	0/0:4,0:4:4.83:0,5,39	0/0:7,0:7:9.03:0,9,122	0/1:16,0:11:12.52:217,0,13	1/1:12,0:9:21.51:249,22,0	1/1:11,6:14:10.39:105,10,0	0/0:9,0:9:3.48:0,3,38	0/0:13,1:12:9.50:0,10,124	0/0:13,0:12:12:0,12,134	0/0:12,0:12:16.53:0,17,175	0/0:26,1:21:11.24:0,11,658	1/1:9,7:13:13.08:211,13,0	./.
chr10	89727722	.	A	AC	1377.11	PASS	AB=0.809;AC=14;AF=0.259;AN=54;BaseQRankSum=1.970;DP=355;FS=20.245;HRun=1;HaplotypeScore=74.6872;InbreedingCoeff=0.5422;MQ=43.40;MQ0=26;MQRankSum=-2.849;QD=10.68;ReadPosRankSum=3.638;VQSLOD=0.2674;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:16.84:0,17,168	0/0:3,0:3:3.45:0,3,23	0/0:7,0:3:6.49:0,6,72	0/0:13,0:5:6.49:0,6,76	0/0:19,0:18:2.26:0,2,38	1/1:6,8:12:8.48:156,8,0	0/1:8,13:20:48.07:183,0,48	1/1:4,7:9:20.10:246,20,0	0/0:9,0:8:5.71:0,6,46	0/0:15,0:15:4.03:0,4,358	0/0:9,0:8:0:0,0,1	0/0:17,0:17:13.95:0,14,198	0/1:19,0:19:1.20:1,0,192	0/0:7,0:6:6.02:0,6,77	0/0:5,0:5:3.01:0,3,38	0/0:20,0:19:24.95:0,25,229	0/0:6,0:6:4.83:0,5,39	0/0:7,0:7:9.03:0,9,105	1/1:6,11:12:18.60:303,19,0	1/1:6,6:9:21.04:250,21,0	1/1:15,4:15:10.42:130,10,0	0/0:9,0:9:3.01:0,3,39	0/0:15,0:13:8.84:0,9,114	0/0:13,0:12:12:0,12,134	0/0:12,0:12:9.50:0,9,120	0/0:28,0:22:7.89:0,8,593	1/1:11,5:13:23.35:274,23,0	./.
chr10	89728173	.	TTA	T	364.67	PASS	AB=0.969;AC=12;AF=0.214;AN=56;BaseQRankSum=9.498;DP=432;FS=0.000;HRun=0;HaplotypeScore=73.7594;InbreedingCoeff=-0.0735;MQ=74.13;MQ0=0;MQRankSum=0.650;QD=2.04;ReadPosRankSum=2.731;VQSLOD=0.9789;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.01:0,87,1255	0/0:8,0:8:24.08:0,24,408	0/1:20,0:13:18.86:19,0,138	0/1:13,0:10:9.56:10,0,39	0/1:25,1:26:76.82:79,0,77	0/0:7,0:7:1.79:0,2,80	0/1:6,0:6:28.60:29,0,34	1/1:7,0:7:17.08:79,17,0	0/1:21,1:22:49.94:77,0,50	0/0:31,0:31:92.91:0,93,1330	0/0:12,0:12:35.85:0,36,424	0/1:16,0:16:2.54:3,0,9	0/0:16,0:16:3.68:0,4,52	0/0:21,0:21:3.47:0,3,46	0/0:11,0:11:33.04:0,33,501	0/0:14,0:14:38.19:0,38,599	0/0:23,0:23:62.85:0,63,959	0/1:10,3:13:18.44:123,0,18	0/0:2,0:2:5.96:0,6,43	0/0:16,0:16:31.28:0,31,257	0/0:1,0:1:2.99:0,3,23	0/1:24,0:24:8.13:63,0,8	0/1:18,0:18:13.27:13,0,65	0/0:14,0:14:11.59:0,12,87	0/0:16,0:16:44.99:0,45,593	0/0:18,0:18:53.84:0,54,659	0/1:13,0:11:18.79:19,0,100	0/0:12,0:12:35.78:0,36,519
chr10	89728174	.	TA	T	3114.06	PASS	AB=0.985;AC=29;AF=0.558;AN=52;BaseQRankSum=6.403;DP=406;FS=6.339;HRun=7;HaplotypeScore=58.1903;InbreedingCoeff=0.7617;MQ=75.84;MQ0=0;MQRankSum=-1.486;QD=13.37;ReadPosRankSum=0.254;VQSLOD=2.6840;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:80.83:0,81,822	0/0:8,0:8:24.06:0,24,274	0/1:20,0:13:10.35:10,0,55	0/1:13,0:10:7.15:7,0,10	1/1:12,13:25:46.35:455,46,0	0/1:5,0:5:1.80:12,0,2	1/1:5,0:6:10.08:48,10,0	1/1:0,0:7:17.08:79,17,0	1/1:4,17:21:48.53:520,49,0	0/0:30,0:30:75.19:0,75,844	0/0:12,0:12:23.01:0,23,252	1/1:3,13:16:24.05:242,24,0	1/1:2,13:15:24.05:242,24,0	1/1:5,16:21:33.06:333,33,0	0/0:11,0:11:30.07:0,30,336	0/0:12,1:13:8.48:0,8,350	0/0:23,0:23:54.23:0,54,604	1/1:5,8:13:18.27:160,18,0	./.	1/1:7,0:8:6.14:21,6,0	./.	1/1:5,19:24:65.48:615,65,0	1/1:6,11:17:34.41:351,34,0	1/1:3,11:14:17.63:179,18,0	0/0:15,0:15:33.06:0,33,361	0/0:18,0:18:40.88:0,41,410	1/1:5,0:7:3.27:41,3,0	0/0:12,0:12:30.56:0,31,333
chr10	89728438	.	TTCTC	T	1024.25	PASS	AB=0.929;AC=26;AF=0.619;AN=42;BaseQRankSum=3.744;DP=536;FS=37.676;HRun=0;HaplotypeScore=97.3462;InbreedingCoeff=0.4718;MQ=70.80;MQ0=8;MQRankSum=-0.401;QD=3.79;ReadPosRankSum=2.437;VQSLOD=0.2143;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,1:31:9.02:135,9,0	./.	./.	./.	1/1:23,2:25:3:46,3,0	1/1:12,0:12:5.98:49,6,0	1/1:25,1:30:12:134,12,0	./.	1/1:14,1:19:8.99:94,9,0	0/0:19,0:20:11.78:0,12,167	0/0:30,0:30:3.01:0,3,51	1/1:15,2:17:12.03:165,12,0	0/0:11,0:10:0.94:0,1,2	1/1:14,0:14:5.97:65,6,0	1/1:10,0:13:4.06:34,4,0	0/0:18,0:18:18.02:0,18,250	./.	0/1:15,3:17:20.61:81,0,21	1/1:22,0:20:6:56,6,0	./.	./.	1/1:17,0:18:2.98:22,3,0	1/1:12,0:12:3.01:46,3,0	1/1:16,7:24:14.58:227,15,0	0/0:20,0:20:9.03:0,9,176	0/0:28,0:27:18.04:0,18,337	0/1:14,0:14:21.85:22,0,39	0/0:9,0:9:6.02:0,6,113
chr10	89731627	.	ACAACTGTTAGGGTGGCCC	A	14493.51	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=14.501;DP=600;FS=0.000;HRun=0;HaplotypeScore=236.9721;InbreedingCoeff=0.9243;MQ=45.95;MQ0=55;MQRankSum=-11.082;QD=86.79;ReadPosRankSum=3.062;VQSLOD=4.4072;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:51.17:0,51,4356	0/0:12,0:10:24.08:0,24,2082	0/0:15,0:2:6.02:0,6,110	0/0:18,0:2:3.01:0,3,59	./.	0/0:22,0:21:54.19:0,54,4160	0/0:27,0:22:51.18:0,51,4309	0/0:27,0:25:66.23:0,66,4795	1/1:12,19:27:48.16:2448,48,0	0/0:21,0:18:48.16:0,48,3406	0/0:6,0:6:12.04:0,12,1031	1/1:8,25:33:72.25:3672,72,0	1/1:5,17:18:39.13:1989,39,0	1/1:5,21:25:57.20:2907,57,0	0/0:24,0:24:47.97:0,48,3651	0/0:25,0:25:54.66:0,55,4508	0/0:40,0:39:93.32:0,93,7280	1/1:8,10:16:27.09:1327,27,0	0/0:23,0:18:48.16:0,48,3327	0/0:12,0:12:33.11:0,33,2307	0/0:59,0:51:99:0,126,9060	1/1:5,8:9:12.04:612,12,0	1/1:3,4:6:6.02:306,6,0	1/1:3,14:16:27.09:1233,27,0	0/0:13,0:13:30.10:0,30,2428	0/0:29,0:26:63.22:0,63,4658	0/0:21,0:20:39.61:0,40,3002	0/0:10,0:10:27.09:0,27,2349
chr10	89733569	.	A	ATTACTTGGAAGTGGAG	56647.57	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-3.699;DP=759;FS=7.284;HRun=0;HaplotypeScore=273.2062;InbreedingCoeff=0.9991;MQ=63.13;MQ0=0;MQRankSum=-19.674;QD=128.16;ReadPosRankSum=-2.994;VQSLOD=3.3638;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,6000	0/0:8,0:8:21.07:0,21,959	0/0:32,0:31:74.60:0,75,2372	0/0:31,0:30:70.47:0,70,2515	1/1:10,13:31:66.23:3812,66,0	1/1:2,12:19:42.14:3132,42,0	1/1:12,5:30:42.14:2819,42,0	1/1:25,0:47:99:7629,132,0	1/1:5,12:31:51.18:3690,51,0	0/0:23,0:23:69.22:0,69,2545	0/0:16,0:16:48.16:0,48,1887	1/1:7,15:33:57.20:4105,57,0	1/1:9,12:26:63.22:4660,63,0	1/1:11,8:24:54.19:3494,54,0	0/0:35,0:35:96.33:0,96,4213	0/0:16,0:16:45.15:0,45,1901	0/0:40,0:40:99:0,114,4640	1/1:8,4:14:30.10:2023,30,0	1/1:11,5:20:54.16:3025,54,0	1/1:7,12:30:66.22:3973,66,0	1/1:7,3:20:24.04:1170,24,0	1/1:11,9:27:57.19:3441,57,0	1/1:10,7:27:51.58:3371,52,0	1/1:10,9:33:45.15:2648,45,0	0/0:27,0:27:78.25:0,78,3031	0/0:25,0:25:75.26:0,75,2856	1/1:5,14:30:50.74:3655,51,0	0/0:15,0:15:45.15:0,45,1888
chr10	89734165	.	AAAAC	A	6252.51	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.065;DP=702;FS=2.745;HRun=0;HaplotypeScore=112.0034;InbreedingCoeff=0.9786;MQ=67.93;MQ0=3;MQRankSum=1.065;QD=27.30;ReadPosRankSum=-0.051;VQSLOD=4.2890;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,27:38:66.23:1057,66,0	0/0:13,0:13:18.06:0,18,432	0/0:28,0:21:9.03:0,9,181	0/0:22,0:19:30.10:0,30,681	0/0:25,1:26:18.17:0,18,1373	1/1:8,10:18:21.07:336,21,0	1/1:16,10:26:27.09:432,27,0	1/1:10,13:22:39.13:618,39,0	0/0:22,0:22:48.16:0,48,1091	0/0:28,0:28:51.17:0,51,1194	0/0:21,0:21:48.15:0,48,1105	0/0:23,0:23:48.16:0,48,1122	0/0:23,0:23:60.21:0,60,1416	0/0:33,0:33:66.23:0,66,1530	1/1:9,19:28:54.18:865,54,0	0/0:22,0:22:42.12:0,42,915	0/0:36,1:37:30.23:0,30,1722	0/0:29,0:29:54.15:0,54,1246	1/1:8,10:16:30.09:456,30,0	1/1:7,20:27:57.15:875,57,0	1/1:9,21:30:54.18:865,54,0	0/0:23,0:23:57.20:0,57,1344	0/0:25,0:25:48.16:0,48,1131	0/0:29,0:29:52.41:0,52,1151	0/0:22,0:22:45.15:0,45,1081	0/0:26,0:26:57.20:0,57,1345	1/1:4,16:21:48.16:748,48,0	0/0:20,1:21:9.16:0,9,1249
chr10	89736404	.	TA	T	3087.90	PASS	AB=0.630;AC=33;AF=0.589;AN=56;BaseQRankSum=3.791;DP=525;FS=0.000;HRun=15;HaplotypeScore=59.1457;InbreedingCoeff=0.4670;MQ=63.31;MQ0=4;MQRankSum=-1.339;QD=7.66;ReadPosRankSum=4.572;VQSLOD=2.6108;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,20:26:44.24:288,44,0	1/1:4,6:10:11.79:77,12,0	0/0:17,0:14:2.95:0,3,84	0/0:8,0:5:2.80:0,3,13	0/1:11,13:26:0.80:117,0,1	1/1:4,11:15:26.57:173,27,0	1/1:5,7:13:13.77:83,14,0	1/1:11,11:22:6.34:130,6,0	1/1:6,13:19:35.40:231,35,0	0/0:21,0:22:38.83:0,39,328	0/0:12,0:14:29.79:0,30,244	0/1:6,16:23:0.46:209,0,0	0/1:4,6:12:7.47:70,0,7	0/1:9,8:16:8.23:62,0,8	0/1:12,10:22:22.78:107,0,23	0/0:12,1:15:16.41:0,16,246	1/1:6,14:21:33.15:215,33,0	0/1:8,14:21:32.18:154,0,32	1/1:12,12:25:4.91:149,5,0	1/1:5,16:21:29.25:190,29,0	1/1:3,19:22:29.53:192,30,0	0/1:8,11:20:24.20:112,0,24	1/1:8,12:20:32.32:211,32,0	1/1:6,15:22:20.01:249,20,0	0/0:18,0:20:28.67:0,29,338	0/0:16,0:16:26.72:0,27,209	1/1:4,17:21:20.94:262,21,0	0/0:9,0:9:15:0,15,132
chr10	89737535	.	G	GA	8019.11	PASS	AB=0.807;AC=38;AF=0.679;AN=56;BaseQRankSum=10.309;DP=574;FS=9.888;HRun=10;HaplotypeScore=100.4379;InbreedingCoeff=0.7974;MQ=54.17;MQ0=27;MQRankSum=-3.375;QD=19.75;ReadPosRankSum=0.987;VQSLOD=4.7789;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,19:44:95.25:1024,95,0	1/1:5,1:6:15.04:160,15,0	0/0:21,0:7:9.26:0,9,50	0/0:21,0:8:12.43:0,12,96	0/1:17,3:20:4.34:344,0,4	1/1:11,1:14:14.20:316,14,0	1/1:6,7:13:32.30:326,32,0	1/1:8,11:19:41.88:406,42,0	1/1:11,9:19:26.41:453,26,0	0/0:27,1:27:35.91:0,36,484	0/0:19,0:18:41.85:0,42,334	1/1:13,10:22:32.46:534,32,0	1/1:8,5:13:30.07:315,30,0	1/1:11,4:15:8.38:265,8,0	1/1:17,8:25:54.12:564,54,0	0/0:19,0:19:44.90:0,45,367	1/1:27,4:30:57.10:595,57,0	0/1:17,7:23:7.13:325,0,7	1/1:14,4:17:18.07:351,18,0	1/1:13,10:23:26.43:470,26,0	1/1:12,1:13:2.36:203,2,0	1/1:18,4:23:42.01:410,42,0	1/1:12,5:17:11.45:326,11,0	1/1:15,4:19:14.45:359,14,0	0/0:19,0:19:47.13:0,47,377	0/0:26,0:26:56.87:0,57,465	1/1:13,5:20:11.11:275,11,0	0/0:13,0:13:38:0,38,301
chr10	89737550	.	CA	C	8698.58	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=11.760;DP=614;FS=0.774;HRun=9;HaplotypeScore=97.3552;InbreedingCoeff=0.9721;MQ=62.83;MQ0=22;MQRankSum=-5.316;QD=20.61;ReadPosRankSum=0.689;VQSLOD=4.9596;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,20:43:67.39:859,67,0	1/1:4,3:7:21.01:192,21,0	0/0:30,0:14:27.46:0,27,272	0/0:23,0:12:4.56:0,5,180	1/1:12,12:23:66:591,66,0	1/1:11,9:20:57.01:516,57,0	1/1:8,5:13:25.25:222,25,0	1/1:6,27:33:51.40:694,51,0	1/1:12,12:22:54:487,54,0	0/0:33,0:31:87.26:0,87,1004	0/0:24,0:24:60.16:0,60,681	1/1:16,8:23:48.01:438,48,0	1/1:7,6:13:32.85:301,33,0	1/1:6,6:12:29.96:264,30,0	1/1:15,9:24:51.01:466,51,0	0/0:18,0:18:45.13:0,45,519	1/1:21,5:25:60.01:544,60,0	1/1:18,8:25:25.38:379,25,0	1/1:13,4:16:32.99:294,33,0	1/1:11,17:28:72.03:657,72,0	1/1:7,4:11:24.01:220,24,0	1/1:11,8:19:48.01:438,48,0	1/1:10,6:16:29.93:273,30,0	1/1:14,6:20:42:380,42,0	0/0:20,0:20:48.61:0,49,555	0/0:26,0:26:57.15:0,57,642	1/1:6,14:20:54:485,54,0	0/0:17,1:18:14.66:0,15,423
chr10	89737832	.	G	GTGTGTGTGTA	25122.50	PASS	AB=0.980;AC=33;AF=0.589;AN=56;BaseQRankSum=-8.333;DP=1032;FS=1.069;HRun=0;HaplotypeScore=298.2399;InbreedingCoeff=0.8893;MQ=55.59;MQ0=9;MQRankSum=-15.291;QD=38.71;ReadPosRankSum=-4.782;VQSLOD=3.1872;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:20.91:0,21,2461	0/0:11,0:11:33.10:0,33,941	0/0:44,0:29:56.72:0,57,1259	0/0:43,0:28:34.34:0,34,777	1/1:8,20:37:24.08:1205,24,0	1/1:6,12:28:15.05:756,15,0	1/1:9,12:26:15.05:647,15,0	1/1:67,0:67:99:3216,99,0	1/1:8,30:45:45.15:2267,45,0	0/0:42,0:42:99:0,102,3078	0/0:29,0:29:57.17:0,57,1632	1/1:7,23:38:45.15:2265,45,0	1/1:26,19:45:81.28:3476,81,0	1/1:13,30:44:45.15:2265,45,0	0/0:47,0:47:99:0,105,3078	0/1:48,1:49:21.62:22,0,3579	0/0:26,0:26:63.46:0,63,1879	1/1:18,4:21:33.08:1326,33,0	1/1:12,11:28:54.17:1857,54,0	1/1:9,12:28:12.04:605,12,0	1/1:36,10:45:5.68:684,6,0	1/1:7,13:29:24.08:1208,24,0	1/1:6,20:30:32.90:1661,33,0	1/1:11,20:41:7.06:450,7,0	0/0:26,0:26:57.20:0,57,1651	0/0:41,0:41:86.55:0,87,2178	1/1:13,22:39:26.30:1214,26,0	0/0:33,0:33:66.23:0,66,2016
chr10	89738055	.	T	TG	612.37	PASS	AB=0.875;AC=11;AF=0.196;AN=56;BaseQRankSum=8.404;DP=933;FS=44.286;HRun=0;HaplotypeScore=259.3965;InbreedingCoeff=-0.0853;MQ=52.06;MQ0=12;MQRankSum=-8.975;QD=1.62;ReadPosRankSum=-5.675;VQSLOD=0.5289;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:99:0,102,1304	0/0:15,0:15:39.09:0,39,503	0/0:30,0:16:48.13:0,48,638	0/0:47,0:29:73.66:0,74,989	0/1:17,5:23:65.45:65,0,224	0/0:28,0:28:26.37:0,26,431	0/1:31,0:32:24:39,0,24	0/0:41,0:40:17.57:0,18,1026	0/1:36,10:48:99:154,0,764	0/0:54,0:53:99:0,153,2029	0/0:26,0:26:68.02:0,68,867	0/1:33,4:37:57.07:74,0,57	0/1:4,2:33:1.08:76,0,1	0/1:26,2:29:99:132,0,287	0/0:32,0:32:75.71:0,76,1018	0/0:50,1:51:68.21:0,68,1775	0/0:30,0:31:70.02:0,70,884	0/1:12,3:15:71.69:72,0,161	0/0:27,0:24:51.52:0,52,556	0/1:23,0:23:58.17:58,0,117	0/1:63,1:65:0.20:0,0,0	0/1:27,0:27:76.49:76,0,177	0/0:20,1:22:8.01:0,8,288	0/1:36,3:41:6:6,0,331	0/0:21,1:22:49.98:0,50,656	0/0:45,0:45:99:0,132,1768	0/0:18,0:19:25.60:0,26,347	0/0:21,0:21:54.18:0,54,734
chr10	89738056	.	T	TGTGTGA	14359.48	PASS	AB=0.568;AC=29;AF=0.518;AN=56;BaseQRankSum=3.727;DP=947;FS=9.311;HRun=0;HaplotypeScore=278.4277;InbreedingCoeff=0.8286;MQ=51.88;MQ0=12;MQRankSum=-10.181;QD=27.20;ReadPosRankSum=-4.942;VQSLOD=2.6560;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:98.76:0,99,1958	0/0:15,0:15:36.11:0,36,765	0/0:30,0:16:48.02:0,48,866	0/0:46,0:29:70.85:0,71,1207	1/1:21,3:25:40.56:587,41,0	1/1:26,1:29:62.88:1072,63,0	1/1:11,20:33:7.72:245,8,0	1/1:47,0:46:99:2646,135,0	1/1:40,1:47:99:2383,106,0	0/0:55,0:54:99:0,151,3160	0/0:26,0:26:65.47:0,65,1316	1/1:10,20:39:18.67:259,19,0	1/1:30,2:32:15.04:355,15,0	1/1:23,2:28:62.72:1283,63,0	0/0:33,0:33:74.88:0,75,1538	0/0:51,0:51:50.30:0,50,2804	0/0:31,0:31:47.85:0,48,1235	1/1:13,1:15:35.85:747,36,0	0/1:10,12:25:3.07:1267,0,3	1/1:8,7:23:13.76:390,14,0	0/1:14,50:69:6.44:6,0,19	0/1:4,18:28:3.39:169,0,3	1/1:16,1:21:52.27:838,52,0	1/1:37,1:42:51.70:1107,52,0	0/0:22,0:22:50.18:0,50,1027	0/0:44,0:44:99:0,129,2768	1/1:14,2:18:24.84:1005,25,0	0/0:21,0:21:54.19:0,54,1213
chr10	89738057	.	ATG	A	2895.37	PASS	AB=0.981;AC=19;AF=0.352;AN=54;BaseQRankSum=-7.853;DP=950;FS=0.441;HRun=0;HaplotypeScore=270.3652;InbreedingCoeff=0.8493;MQ=50.82;MQ0=12;MQRankSum=7.414;QD=8.49;ReadPosRankSum=6.168;VQSLOD=2.8491;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:43:31.80:251,32,0	1/1:3,0:15:25.57:126,26,0	./.	0/0:44,0:26:0:0,0,0	0/0:26,0:27:3.93:0,4,16	0/0:27,0:29:27.71:0,28,170	0/0:31,0:31:27.79:0,28,206	0/0:54,0:53:52.37:0,52,323	0/0:43,0:50:45.01:0,45,289	1/1:32,21:52:57.63:667,58,0	1/1:10,16:26:39.11:436,39,0	0/0:35,0:38:11.44:0,11,75	0/0:31,0:31:10.13:0,10,67	0/0:25,0:29:25.28:0,25,159	1/1:17,0:33:31.27:164,31,0	0/1:51,1:52:0.47:0,0,975	1/1:12,0:31:34.02:167,34,0	0/0:14,0:15:15.11:0,15,132	0/0:23,0:20:23.11:0,23,176	0/0:17,0:18:24.92:0,25,156	0/0:68,0:68:2.97:0,3,42	0/0:28,0:29:11:0,11,81	0/0:19,0:23:7.50:0,8,33	0/0:41,0:45:23.10:0,23,175	1/1:9,11:22:29.75:297,30,0	1/1:21,22:44:65.97:709,66,0	0/0:19,0:21:34.67:0,35,262	1/1:9,9:21:29.58:278,30,0
chr10	89738600	.	G	GAAA	6807.01	PASS	AB=0.973;AC=34;AF=0.607;AN=56;BaseQRankSum=9.514;DP=497;FS=0.360;HRun=4;HaplotypeScore=124.2204;InbreedingCoeff=0.6536;MQ=84.19;MQ0=5;MQRankSum=0.577;QD=21.21;ReadPosRankSum=0.306;VQSLOD=1.3246;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,1759	0/0:3,0:3:6.02:0,6,92	0/1:30,0:24:13.82:14,0,311	0/1:18,0:16:32.83:33,0,120	1/1:4,15:20:48.16:952,48,0	1/1:14,0:14:8.89:49,9,0	1/1:11,0:15:17.88:135,18,0	0/1:29,0:29:17.01:172,0,17	1/1:6,12:18:39.13:752,39,0	0/0:22,0:22:60.20:0,60,919	0/0:12,0:12:30.10:0,30,459	1/1:5,12:20:59.32:1031,59,0	1/1:5,10:16:38.51:652,39,0	1/1:5,6:11:23.44:403,23,0	0/0:11,0:11:33.11:0,33,485	0/1:15,1:16:20.64:21,0,492	0/0:47,0:47:99:0,126,1874	1/1:0,12:16:48.16:947,48,0	1/1:14,0:17:21.09:129,21,0	1/1:14,0:15:3.32:63,3,0	1/1:10,0:11:22.95:102,23,0	1/1:3,8:13:30.10:568,30,0	1/1:3,6:9:18.06:326,18,0	1/1:2,6:9:15.05:279,15,0	0/0:11,0:11:30.08:0,30,437	0/0:20,0:20:54.18:0,54,826	1/1:18,0:21:30.55:179,31,0	0/0:9,0:9:24.08:0,24,368
chr10	89738612	.	TTA	T	5988.22	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=10.570;DP=507;FS=2.937;HRun=0;HaplotypeScore=123.1106;InbreedingCoeff=0.9787;MQ=82.68;MQ0=5;MQRankSum=-4.715;QD=23.39;ReadPosRankSum=-0.154;VQSLOD=5.5695;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:80.22:0,80,1007	0/0:5,0:5:14.91:0,15,117	0/0:30,0:24:38.96:0,39,557	0/0:22,0:18:35.51:0,36,502	1/1:4,15:18:47.54:534,48,0	1/1:14,0:14:39.35:267,39,0	1/1:15,1:16:40.22:354,40,0	1/1:25,0:25:54.13:420,54,0	1/1:2,12:14:42.05:469,42,0	0/0:22,0:22:66.20:0,66,1140	0/0:11,0:11:33.08:0,33,531	1/1:6,14:20:54.40:623,54,0	1/1:1,15:16:37.26:433,37,0	1/1:0,10:10:24.05:276,24,0	0/0:16,0:16:19.56:0,20,299	0/0:13,1:14:5.69:0,6,628	0/0:45,0:45:99:0,114,1126	1/1:5,12:17:40.65:486,41,0	1/1:18,0:18:45.08:387,45,0	1/1:18,1:19:47.80:378,48,0	1/1:9,1:10:26.46:188,26,0	1/1:2,14:16:37.64:372,38,0	1/1:5,6:11:20.97:204,21,0	1/1:2,6:8:17.69:166,18,0	0/0:15,0:15:45.13:0,45,769	0/0:22,0:22:63.18:0,63,1064	1/1:22,1:23:47.58:431,48,0	0/0:8,0:8:24.08:0,24,410
chr10	89738613	.	TA	T	4212.04	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=10.558;DP=505;FS=2.583;HRun=6;HaplotypeScore=120.4496;InbreedingCoeff=0.9901;MQ=82.87;MQ0=4;MQRankSum=-2.887;QD=16.33;ReadPosRankSum=0.996;VQSLOD=4.0246;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,1403	0/0:5,0:5:14.95:0,15,149	0/0:28,0:24:23.20:0,23,282	0/0:22,0:18:33.59:0,34,322	1/1:18,1:18:47.88:419,48,0	1/1:14,0:14:31.16:145,31,0	1/1:16,0:16:31.40:208,31,0	1/1:26,1:27:46.84:357,47,0	1/1:15,0:15:44.97:394,45,0	0/0:22,0:22:60.18:0,60,741	0/0:11,0:11:30.07:0,30,355	1/1:20,0:20:47.95:417,48,0	1/1:16,0:16:35.84:307,36,0	1/1:10,0:10:23.97:205,24,0	0/0:15,0:15:39.92:0,40,416	0/0:15,0:15:15.12:0,15,439	0/0:45,0:45:99:0,132,1604	1/1:17,0:17:39.04:367,39,0	1/1:16,2:18:31.89:212,32,0	1/1:19,0:19:39.24:256,39,0	1/1:10,0:10:22.30:108,22,0	1/1:16,0:16:35.81:292,36,0	1/1:6,5:11:20.88:166,21,0	1/1:8,0:8:14.71:129,15,0	0/0:15,0:15:45.11:0,45,536	0/0:20,0:20:57.16:0,57,691	1/1:21,1:21:42.20:230,42,0	0/0:8,0:8:18.06:0,18,229
chr10	89740002	.	ATT	A	1681.51	PASS	AB=0.614;AC=21;AF=0.375;AN=56;BaseQRankSum=9.811;DP=562;FS=0.908;HRun=16;HaplotypeScore=91.4632;InbreedingCoeff=0.2149;MQ=67.53;MQ0=2;MQRankSum=0.016;QD=6.52;ReadPosRankSum=1.113;VQSLOD=0.4494;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:39:63.11:0,63,878	0/1:2,1:6:11.95:12,0,51	0/0:38,0:11:15.64:0,16,134	0/0:29,0:12:1.83:0,2,33	0/1:4,2:19:26.87:27,0,58	1/1:7,13:24:38.05:281,38,0	1/1:4,6:11:20.61:162,21,0	1/1:8,21:31:38.92:443,39,0	0/1:4,2:15:19.57:20,0,88	0/0:18,0:23:14.24:0,14,328	0/0:10,1:12:4.34:0,4,268	0/0:4,0:12:11.98:0,12,42	0/1:3,2:19:21.43:21,0,77	0/1:10,2:18:31.40:31,0,54	0/0:14,0:18:40.81:0,41,443	0/0:10,0:14:26.43:0,26,306	0/0:32,3:38:1.11:0,1,654	0/1:4,9:21:87.26:87,0,95	0/1:8,6:14:13.19:91,0,13	1/1:4,11:17:26.47:212,26,0	1/1:3,3:6:5.95:50,6,0	0/1:9,2:17:40.57:41,0,105	0/1:5,3:13:57.66:58,0,65	0/0:1,0:7:7.11:0,7,25	0/0:15,0:22:46.20:0,46,502	0/0:28,0:36:70.89:0,71,785	1/1:7,18:27:15.37:330,15,0	0/0:14,0:16:26.44:0,26,306
chr10	89740915	.	G	GAA	7854.48	PASS	AB=0.929;AC=33;AF=0.589;AN=56;BaseQRankSum=-9.042;DP=528;FS=2.838;HRun=11;HaplotypeScore=74.7030;InbreedingCoeff=0.8796;MQ=69.76;MQ0=6;MQRankSum=-0.212;QD=24.55;ReadPosRankSum=-4.069;VQSLOD=3.8598;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:24:57.81:0,58,266	0/0:5,0:9:16.57:0,17,74	0/0:24,0:13:14.87:0,15,132	0/0:18,0:15:7.44:0,7,104	1/1:4,21:28:62.64:811,63,0	1/1:9,16:25:59.16:783,59,0	1/1:7,10:18:39.13:550,39,0	1/1:7,12:22:41.87:415,42,0	1/1:2,13:15:27.09:390,27,0	0/0:18,0:18:42.02:0,42,407	0/0:15,0:18:35.62:0,36,371	1/1:5,14:19:27.09:391,27,0	1/1:10,8:18:12.63:427,13,0	1/1:8,4:13:33.07:394,33,0	0/0:2,0:19:49.65:0,50,230	0/1:12,1:13:13.41:13,0,232	0/0:1,0:27:63.04:0,63,272	1/1:4,21:25:48.09:650,48,0	1/1:5,8:12:21.07:304,21,0	1/1:5,7:14:34.90:433,35,0	1/1:1,5:7:6.02:87,6,0	1/1:13,6:19:38.59:489,39,0	1/1:9,13:23:57.54:749,58,0	1/1:1,19:23:42.08:540,42,0	0/0:18,0:21:50.76:0,51,527	0/0:23,0:23:57.06:0,57,553	1/1:4,16:21:33.18:428,33,0	0/0:4,0:4:5.96:0,6,58
chr10	89740994	.	G	GT	4845.33	PASS	AB=0.742;AC=21;AF=0.375;AN=56;BaseQRankSum=-2.594;DP=506;FS=3.292;HRun=10;HaplotypeScore=84.9817;InbreedingCoeff=0.8978;MQ=75.00;MQ0=1;MQRankSum=-3.157;QD=21.16;ReadPosRankSum=-0.976;VQSLOD=5.2420;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,15:23:53.02:512,53,0	1/1:2,5:7:21.03:213,21,0	0/0:23,0:18:23.39:0,23,178	0/0:19,0:15:13.19:0,13,87	0/0:23,0:23:50.71:0,51,402	1/1:7,19:25:68.08:671,68,0	1/1:4,13:17:42.02:422,42,0	1/1:21,15:39:11.49:550,11,0	0/0:11,0:11:20.96:0,21,172	0/0:17,0:18:37.98:0,38,300	0/0:16,0:16:38.70:0,39,291	0/0:10,0:10:20.80:0,21,158	0/0:4,0:4:11.99:0,12,99	0/0:17,0:18:46.77:0,47,351	1/1:8,11:21:47.77:452,48,0	0/0:16,0:16:33.83:0,34,273	1/1:8,13:21:45.08:464,45,0	0/0:23,0:23:47.89:0,48,388	0/1:15,8:23:25.86:328,0,26	1/1:6,13:19:26.29:454,26,0	1/1:3,4:7:18:176,18,0	0/0:10,0:11:25.50:0,26,188	0/0:22,0:22:44.91:0,45,364	0/0:20,0:20:35.93:0,36,292	0/0:20,0:20:53.93:0,54,441	0/0:19,0:19:18.84:0,19,347	1/1:8,17:26:60.39:603,60,0	0/0:3,0:3:8.94:0,9,67
chr10	89741031	.	ATT	A	4016.44	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=10.051;DP=450;FS=8.436;HRun=13;HaplotypeScore=101.6590;InbreedingCoeff=0.9635;MQ=65.52;MQ0=1;MQRankSum=-3.544;QD=15.94;ReadPosRankSum=2.127;VQSLOD=2.4451;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,1:29:34.38:0,34,203	0/0:0,0:8:17.07:0,17,58	0/0:19,0:14:11.90:0,12,132	0/0:17,0:10:11.09:0,11,123	1/1:4,12:16:33:320,33,0	1/1:0,0:21:54.64:235,55,0	1/1:2,0:15:36.56:156,37,0	1/1:4,0:22:40.14:170,40,0	1/1:1,7:8:21.03:204,21,0	0/0:18,0:18:42.13:0,42,591	0/0:13,0:15:36.10:0,36,481	1/1:1,9:11:26.77:244,27,0	1/1:0,6:6:18.03:175,18,0	1/1:4,13:17:33.02:320,33,0	0/0:9,0:17:25.74:0,26,87	0/0:11,0:13:30.09:0,30,404	0/0:6,1:15:5.10:0,5,103	1/1:2,15:18:38.99:378,39,0	1/1:9,1:23:38.51:183,39,0	1/1:3,0:16:35.60:154,36,0	1/1:3,0:11:21.86:94,22,0	1/1:2,13:16:44.79:414,45,0	1/1:5,15:22:53.49:479,53,0	1/1:3,14:17:36.01:349,36,0	0/0:20,0:20:41.59:0,42,534	0/0:21,0:21:19.08:0,19,604	1/1:0,0:12:32.93:142,33,0	0/0:6,0:6:12.04:0,12,174
chr10	89741361	.	G	GT	14219.45	PASS	AB=0.857;AC=33;AF=0.589;AN=56;BaseQRankSum=15.335;DP=609;FS=0.658;HRun=3;HaplotypeScore=86.6772;InbreedingCoeff=0.9302;MQ=77.45;MQ0=0;MQRankSum=-0.228;QD=36.27;ReadPosRankSum=0.921;VQSLOD=5.1953;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1329	0/0:8,0:8:24.07:0,24,285	0/1:5,1:6:11.67:12,0,126	0/0:21,0:21:39.08:0,39,438	1/1:1,10:11:30.10:420,30,0	1/1:0,12:12:24.08:329,24,0	1/1:3,29:32:81.27:1134,81,0	1/1:3,25:28:78.23:1063,78,0	1/1:1,21:22:60.20:840,60,0	0/0:26,0:26:72.22:0,72,864	0/0:12,0:12:33.10:0,33,396	1/1:2,28:30:69.23:966,69,0	1/1:2,24:26:69.23:958,69,0	1/1:3,24:27:66.22:924,66,0	0/0:25,0:25:69.17:0,69,799	0/0:24,0:24:72.20:0,72,850	0/0:17,0:17:48.15:0,48,576	1/1:1,24:25:69.23:966,69,0	1/1:1,11:12:36.11:481,36,0	1/1:0,23:23:66.22:916,66,0	1/1:3,45:48:99:1805,129,0	1/1:0,19:19:57.19:789,57,0	1/1:1,17:18:48.12:650,48,0	1/1:2,30:32:90.30:1252,90,0	0/0:14,0:14:42.13:0,42,504	0/0:20,0:20:57.17:0,57,684	1/1:0,21:21:51.17:714,51,0	0/0:11,0:11:33.10:0,33,395
chr10	89741508	.	T	TTC	1743.49	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=7.724;DP=533;FS=7.037;HRun=0;HaplotypeScore=106.7228;InbreedingCoeff=0.9480;MQ=61.93;MQ0=2;MQRankSum=1.651;QD=10.20;ReadPosRankSum=6.021;VQSLOD=2.5709;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:63.35:0,63,474	0/0:7,0:7:13.64:0,14,70	0/0:11,0:9:10.99:0,11,137	0/0:6,0:4:12:0,12,121	1/1:18,0:18:46.10:246,46,0	0/0:14,0:14:8.46:0,8,76	0/0:16,0:16:13.50:0,13,170	0/0:34,0:31:26.74:0,27,374	1/1:15,2:17:33.56:205,34,0	0/0:19,0:19:56.97:0,57,622	0/0:25,0:24:64.12:0,64,677	1/1:18,0:18:14.50:168,14,0	1/1:16,0:16:13.72:89,14,0	1/1:19,0:19:13.54:129,14,0	0/0:16,0:16:16.24:0,16,165	0/0:21,0:21:47.92:0,48,513	0/0:21,0:20:17.24:0,17,197	1/1:18,1:18:29.68:254,30,0	0/0:11,0:11:11.75:0,12,136	0/0:16,0:16:13.23:0,13,221	0/0:16,0:15:19.92:0,20,172	1/1:17,0:17:45.90:289,46,0	1/1:9,1:10:20.12:131,20,0	1/1:36,1:37:74.59:444,75,0	0/0:24,0:24:65.84:0,66,750	0/0:22,0:22:60.44:0,60,636	0/0:30,0:29:19.99:0,20,242	0/0:17,0:17:48.11:0,48,642
chr10	89741509	.	T	TC	3857.87	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=0.419;DP=536;FS=1.279;HRun=0;HaplotypeScore=72.3589;InbreedingCoeff=0.9530;MQ=58.81;MQ0=2;MQRankSum=4.664;QD=21.92;ReadPosRankSum=6.901;VQSLOD=4.8318;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:45.29:0,45,346	0/0:7,0:7:7.33:0,7,17	0/0:8,0:6:11:0,11,137	0/0:6,0:4:12:0,12,122	1/1:1,17:18:47.86:509,48,0	0/0:14,0:14:31.74:0,32,191	0/0:15,0:15:41.35:0,41,294	0/0:34,0:31:81.32:0,81,612	1/1:3,14:17:39.01:438,39,0	0/0:19,0:19:57:0,57,595	0/0:26,0:25:64.89:0,65,646	1/1:1,17:18:27.16:356,27,0	1/1:3,16:19:19.61:248,20,0	1/1:2,17:19:25.94:381,26,0	0/0:16,0:16:27.98:0,28,209	0/0:20,0:20:56.95:0,57,567	0/0:21,0:20:24.52:0,25,194	1/1:12,7:18:43.48:382,43,0	0/0:11,0:11:28.68:0,29,211	0/0:16,0:16:43.89:0,44,314	0/0:16,0:15:27.73:0,28,212	1/1:4,15:19:46.05:420,46,0	1/1:2,8:10:4.45:214,4,0	1/1:4,33:37:77.76:911,78,0	0/0:24,0:24:64.70:0,65,690	0/0:23,0:23:60.44:0,60,601	0/0:27,0:30:70.51:0,71,511	0/0:17,0:17:48.08:0,48,575
chr10	89742271	.	A	AAAC	5544.57	PASS	AB=0.981;AC=15;AF=0.268;AN=56;BaseQRankSum=-7.709;DP=601;FS=2.992;HRun=0;HaplotypeScore=109.8023;InbreedingCoeff=0.9285;MQ=61.06;MQ0=7;MQRankSum=-6.488;QD=31.50;ReadPosRankSum=-1.100;VQSLOD=5.1276;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:81.19:0,81,1133	0/0:6,0:6:15.04:0,15,221	0/0:34,0:16:7.92:0,8,229	0/1:50,0:19:1.47:1,0,239	0/0:25,0:25:63.19:0,63,910	1/1:2,11:12:33.11:666,33,0	1/1:4,11:15:33.11:692,33,0	1/1:6,25:30:75.20:1368,75,0	0/0:17,0:17:38.79:0,39,539	0/0:26,0:26:63.21:0,63,938	0/0:15,0:15:37.09:0,37,570	0/0:19,0:19:45.14:0,45,672	0/0:21,0:21:33.08:0,33,440	0/0:14,0:14:39.11:0,39,553	0/0:27,0:27:66.21:0,66,968	0/0:19,0:19:51.15:0,51,706	0/0:29,0:29:71.89:0,72,1035	0/0:30,0:30:65.83:0,66,908	1/1:12,4:16:30.08:483,30,0	1/1:5,14:19:48.13:886,48,0	1/1:7,3:10:27.02:429,27,0	0/0:10,0:9:24.07:0,24,352	0/0:15,0:15:36.11:0,36,532	0/0:24,0:24:45.14:0,45,673	0/0:21,0:21:48.15:0,48,718	0/0:30,0:29:75.21:0,75,1105	1/1:8,13:20:60.03:1018,60,0	0/0:6,0:6:18.06:0,18,278
chr10	89742305	.	C	CA	5296.73	PASS	AB=0.904;AC=43;AF=0.768;AN=56;BaseQRankSum=2.813;DP=643;FS=2.642;HRun=11;HaplotypeScore=91.8518;InbreedingCoeff=0.5402;MQ=54.19;MQ0=28;MQRankSum=0.678;QD=9.29;ReadPosRankSum=1.455;VQSLOD=4.2009;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,26:33:19.50:546,19,0	1/1:0,8:8:21.04:212,21,0	0/1:75,0:16:28.04:28,0,112	0/1:92,0:15:12.24:12,0,34	1/1:21,0:20:49.38:296,49,0	1/1:4,8:12:27:261,27,0	1/1:4,6:11:20.88:196,21,0	1/1:17,6:21:3.31:261,3,0	1/1:19,0:19:40.95:240,41,0	0/0:17,0:18:40.73:0,41,300	0/1:13,1:13:0.31:0,0,189	1/1:16,0:16:29.42:186,29,0	1/1:14,0:14:29.41:187,29,0	1/1:11,0:11:29.20:170,29,0	1/1:5,15:21:5.98:276,6,0	0/1:13,0:12:6.75:7,0,137	1/1:5,23:30:23.76:470,24,0	1/1:26,0:26:58.22:327,58,0	1/1:11,8:16:36.33:336,36,0	1/1:11,6:18:38.62:339,39,0	1/1:1,12:13:15.03:152,15,0	1/1:10,0:10:20.43:120,20,0	1/1:9,0:9:20.41:121,20,0	1/1:19,0:19:35.02:199,35,0	0/0:16,0:17:44.74:0,45,328	0/0:26,0:26:65.26:0,65,492	0/1:11,24:37:36.53:355,0,37	0/0:11,0:10:20.91:0,21,162
chr10	89742310	.	A	AC	4521.62	PASS	AB=0.994;AC=29;AF=0.518;AN=56;BaseQRankSum=4.031;DP=646;FS=0.380;HRun=0;HaplotypeScore=91.4570;InbreedingCoeff=0.4054;MQ=55.89;MQ0=30;MQRankSum=1.274;QD=12.74;ReadPosRankSum=7.675;VQSLOD=5.2310;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:38:29.56:30,0,155	1/1:8,0:8:9.88:33,10,0	0/0:79,0:16:21.47:0,21,290	0/0:93,0:15:12.10:0,12,152	1/1:3,18:20:40.84:630,41,0	0/1:12,0:12:30.68:47,0,31	0/1:10,0:10:12.53:13,0,68	0/0:21,0:19:7.67:0,8,216	1/1:1,18:19:45.12:593,45,0	0/0:19,0:19:57.06:0,57,688	0/0:14,0:13:34.39:0,34,446	1/1:0,14:14:30.10:406,30,0	1/1:0,13:14:30.09:396,30,0	1/1:0,13:13:30.10:408,30,0	0/1:19,0:19:6.98:7,0,92	0/0:12,0:11:25.61:0,26,334	0/1:34,0:34:18.55:19,0,152	1/1:0,24:24:60.20:814,60,0	0/1:18,1:16:51.24:65,0,51	0/1:17,0:17:1.96:2,0,75	0/1:16,0:16:2.12:2,0,56	1/1:1,8:9:21.07:284,21,0	1/1:1,7:8:18.80:257,19,0	1/1:0,21:21:36.12:490,36,0	0/0:17,0:17:50.99:0,51,647	0/0:24,0:24:72.19:0,72,955	0/1:37,0:36:25.67:26,0,209	0/0:11,0:10:30.07:0,30,372
chr10	89742576	.	TA	T	2341.63	PASS	AB=0.886;AC=16;AF=0.286;AN=56;BaseQRankSum=8.171;DP=509;FS=15.198;HRun=10;HaplotypeScore=58.1867;InbreedingCoeff=0.8342;MQ=71.72;MQ0=0;MQRankSum=-0.109;QD=15.30;ReadPosRankSum=-0.195;VQSLOD=2.2200;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:57.12:0,57,613	0/0:9,0:9:24.06:0,24,266	0/0:15,0:8:18.02:0,18,175	0/0:26,0:22:28.37:0,28,272	0/0:30,0:31:74.24:0,74,847	1/1:4,12:16:29.98:260,30,0	1/1:0,14:14:38.99:339,39,0	1/1:9,25:34:71.94:625,72,0	0/0:11,1:12:7.05:0,7,306	0/0:21,0:21:57.15:0,57,624	0/0:18,0:18:39.10:0,39,425	0/1:13,2:15:10.54:11,0,317	0/0:11,0:11:27.04:0,27,279	0/0:14,0:14:36.07:0,36,384	0/0:15,0:15:36.10:0,36,398	0/1:7,1:8:5.01:5,0,169	0/0:28,0:29:65.99:0,66,698	0/0:20,0:20:54.15:0,54,597	1/1:4,9:13:23.99:208,24,0	1/1:1,16:17:47.99:416,48,0	1/1:4,12:16:23.99:208,24,0	0/0:8,0:8:24.06:0,24,265	0/0:13,0:13:33.09:0,33,365	0/0:28,0:28:78.18:0,78,844	0/0:23,0:23:48.79:0,49,671	0/0:30,0:30:84.22:0,84,921	1/1:2,18:20:53.99:469,54,0	0/0:8,0:8:23.99:0,24,240
chr10	89742637	.	CATGT	C	2162.33	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=-0.007;DP=450;FS=7.735;HRun=0;HaplotypeScore=77.4325;InbreedingCoeff=0.8420;MQ=71.03;MQ0=6;MQRankSum=-1.476;QD=14.91;ReadPosRankSum=-1.077;VQSLOD=2.2687;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:56.89:0,57,637	0/0:3,0:3:9.01:0,9,140	0/0:29,0:21:53.65:0,54,557	0/0:37,0:30:70.28:0,70,791	0/0:17,0:17:47.65:0,48,408	1/1:10,1:11:26.86:267,27,0	1/1:14,1:15:44.52:356,45,0	1/1:22,0:22:62.41:444,62,0	0/0:7,0:7:20.93:0,21,171	0/0:15,0:15:41.68:0,42,386	0/0:11,0:11:26.96:0,27,315	0/0:12,0:12:35.93:0,36,292	0/1:11,0:10:1.85:2,0,144	0/0:8,0:8:20.26:0,20,143	0/0:14,0:15:13.63:0,14,224	0/0:9,0:8:23.97:0,24,324	0/0:18,0:18:50.79:0,51,438	0/1:20,0:20:18.18:18,0,249	1/1:20,0:20:57.04:363,57,0	1/1:11,2:13:29.90:346,30,0	1/1:13,1:13:26.68:232,27,0	0/0:11,0:10:17.94:0,18,144	0/0:10,0:10:26.98:0,27,263	0/0:27,0:27:60.50:0,60,562	0/0:17,0:17:47.99:0,48,579	0/0:23,0:23:68.16:0,68,687	1/1:17,1:17:44.06:333,44,0	0/0:14,0:14:41.97:0,42,532
chr10	89742638	.	ATG	A	437.32	PASS	AB=0.866;AC=24;AF=0.600;AN=40;BaseQRankSum=3.412;DP=466;FS=2.925;HRun=0;HaplotypeScore=68.6688;InbreedingCoeff=0.2112;MQ=68.79;MQ0=8;MQRankSum=-0.787;QD=2.14;ReadPosRankSum=2.625;VQSLOD=1.2171;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:6.02:0,6,86	0/1:2,1:3:25.62:26,0,38	./.	./.	./.	1/1:10,0:11:5.64:27,6,0	1/1:16,0:15:2.84:14,3,0	./.	1/1:7,1:8:6.02:63,6,0	0/0:18,0:18:0:0,0,0	0/0:11,0:11:3.01:0,3,44	./.	1/1:12,0:11:2.84:14,3,0	./.	1/1:13,1:15:8.86:76,9,0	0/0:9,0:8:3.01:0,3,44	0/1:14,4:18:10.44:112,0,10	1/1:14,0:20:8.99:43,9,0	./.	1/1:14,0:13:11.27:54,11,0	1/1:17,0:15:2.31:13,2,0	./.	1/1:8,3:11:6.01:63,6,0	0/1:26,1:27:25.62:26,0,38	0/0:18,0:18:9.03:0,9,131	0/0:24,0:24:9.03:0,9,128	1/1:18,0:17:2.43:13,2,0	0/1:13,1:14:25.62:26,0,38
chr10	89744444	.	C	CT	1888.33	PASS	AB=0.804;AC=20;AF=0.357;AN=56;BaseQRankSum=-2.454;DP=568;FS=0.000;HRun=13;HaplotypeScore=73.1388;InbreedingCoeff=0.4824;MQ=64.06;MQ0=0;MQRankSum=-0.882;QD=6.67;ReadPosRankSum=-1.110;VQSLOD=2.2053;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:64.11:0,64,433	0/1:6,1:7:9.98:10,0,85	0/0:8,0:6:8.89:0,9,59	0/0:5,0:5:2.97:0,3,20	1/1:5,19:24:27.19:346,27,0	0/0:16,0:16:41.14:0,41,276	0/0:17,1:19:0.86:0,1,142	0/1:26,4:32:36.81:37,0,169	1/1:7,18:25:7.33:204,7,0	0/0:10,0:10:8.34:0,8,61	0/0:16,0:19:27:0,27,175	1/1:6,14:20:15.02:139,15,0	0/1:8,15:24:5.39:214,0,5	1/1:4,15:20:20.73:169,21,0	0/0:20,2:22:7.79:0,8,198	0/0:20,0:20:11.27:0,11,202	0/0:31,0:32:55.39:0,55,374	1/1:8,9:18:23.76:187,24,0	0/1:22,1:23:9.52:10,0,156	0/0:20,0:20:38.50:0,38,267	0/0:22,0:25:44.61:0,45,280	1/1:4,10:15:32.65:257,33,0	0/1:4,11:17:13.83:127,0,14	1/1:12,17:29:28.39:374,28,0	0/0:22,0:22:41.47:0,41,288	0/0:22,0:22:27.78:0,28,187	0/1:26,2:28:5.34:5,0,254	0/0:8,0:9:16.86:0,17,109
chr10	89744558	.	T	TAAAG	10723.27	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-12.694;DP=624;FS=6.213;HRun=0;HaplotypeScore=92.1134;InbreedingCoeff=0.9970;MQ=76.56;MQ0=0;MQRankSum=-5.436;QD=60.93;ReadPosRankSum=-2.114;VQSLOD=5.8181;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,2219	0/0:7,0:7:18.06:0,18,342	0/0:20,0:20:49.72:0,50,769	0/0:18,0:18:44.51:0,45,788	0/0:27,0:27:78.27:0,78,1474	1/1:2,19:22:54.19:1429,54,0	1/1:4,29:33:78.27:2042,78,0	1/1:11,15:22:54.19:1367,54,0	0/0:21,0:21:57.16:0,57,998	0/0:23,0:23:66.22:0,66,1223	0/0:17,0:17:51.16:0,51,926	0/0:24,0:24:72.23:0,72,1320	0/0:20,0:20:54.19:0,54,1025	0/0:17,0:17:51.16:0,51,920	0/0:19,0:19:57.17:0,57,1013	0/0:22,0:22:63.19:0,63,1120	0/0:32,0:32:84.29:0,84,1583	0/0:13,0:13:33.09:0,33,593	1/1:5,15:20:54.16:1333,54,0	1/1:0,20:22:54.18:1364,54,0	1/1:5,22:28:66.23:1781,66,0	0/0:22,0:22:63.22:0,63,1188	0/0:20,0:20:56.54:0,57,1000	0/0:39,0:39:99:0,102,1892	0/0:14,0:14:42.13:0,42,764	0/0:27,0:27:81.23:0,81,1442	1/1:3,20:24:53.85:1407,54,0	0/0:6,0:6:18.06:0,18,339
chr10	89744731	.	AC	A	5600.76	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=0.995;DP=583;FS=8.855;HRun=1;HaplotypeScore=71.4678;InbreedingCoeff=0.7651;MQ=61.61;MQ0=2;MQRankSum=0.866;QD=31.46;ReadPosRankSum=-4.245;VQSLOD=2.5932;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,1846	0/0:10,0:10:30.06:0,30,399	0/0:17,0:8:20.96:0,21,244	0/0:20,0:14:3.25:0,3,329	0/0:31,0:31:84.19:0,84,375	1/1:0,14:14:42.14:587,42,0	1/1:0,18:18:51.13:690,51,0	1/1:0,29:28:84.21:1088,84,0	0/1:17,0:17:55.06:55,0,99	0/0:22,0:22:66.22:0,66,990	0/0:19,0:19:57.19:0,57,840	0/0:25,0:25:61.41:0,61,242	0/1:16,0:16:31.26:31,0,93	0/0:10,0:10:2.08:0,2,79	0/0:21,0:21:63.21:0,63,928	0/0:11,0:11:33.10:0,33,470	0/0:24,0:24:66.22:0,66,995	0/0:17,0:17:23.61:0,24,185	1/1:0,19:19:54.11:701,54,0	1/1:0,30:30:81.16:1065,81,0	1/1:0,11:11:30.10:419,30,0	0/0:18,0:18:17.98:0,18,161	0/0:16,0:16:16.93:0,17,144	0/0:23,0:23:22.55:0,23,177	0/0:20,0:20:60.17:0,60,859	0/0:39,0:39:99:0,117,1693	1/1:0,24:24:69.23:964,69,0	0/0:19,0:19:54.15:0,54,803
chr10	89746237	.	TACACACACACACAC	T	2008.50	PASS	AB=0.784;AC=17;AF=0.327;AN=52;BaseQRankSum=6.761;DP=519;FS=3.093;HRun=0;HaplotypeScore=198.2516;InbreedingCoeff=0.3964;MQ=56.27;MQ0=6;MQRankSum=-4.761;QD=10.46;ReadPosRankSum=2.207;VQSLOD=2.8413;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:28:24.06:0,24,533	0/0:7,0:7:3.01:0,3,201	./.	0/0:27,0:19:3.01:0,3,41	0/0:8,2:10:5.92:0,6,39	0/0:10,0:10:6.02:0,6,85	0/1:18,0:26:39.20:54,0,39	0/0:29,0:29:26.92:0,27,349	1/1:4,3:9:17.88:380,18,0	0/0:23,0:23:36.12:0,36,1415	0/0:14,0:15:12.04:0,12,643	1/1:9,10:19:9.50:273,10,0	1/1:8,3:17:27.50:766,27,0	1/1:6,8:15:2.95:117,3,0	0/0:14,0:15:18.06:0,18,891	0/0:13,0:13:24.08:0,24,1167	0/0:25,0:25:33.58:0,34,1543	1/1:9,5:15:10.85:302,11,0	0/1:17,0:18:11.47:11,0,20	0/1:12,0:16:5.69:6,0,78	0/0:20,0:19:18.02:0,18,222	./.	1/1:13,9:22:0.40:75,0,0	0/1:10,6:16:18.10:111,0,18	0/0:23,0:27:18.06:0,18,911	0/0:22,0:23:47.53:0,48,1929	0/1:10,0:18:39.68:80,0,40	0/0:14,0:16:33.10:0,33,1602
chr10	89746968	.	A	ATC	1341.79	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=5.322;DP=450;FS=5.747;HRun=0;HaplotypeScore=69.1469;InbreedingCoeff=0.9243;MQ=65.99;MQ0=6;MQRankSum=-0.205;QD=9.25;ReadPosRankSum=3.188;VQSLOD=2.8159;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:52.50:0,52,455	0/0:3,0:3:5.87:0,6,39	0/0:16,0:7:14.94:0,15,135	0/0:11,0:7:1.56:0,2,41	1/1:15,2:17:35.79:302,36,0	0/0:11,0:11:27.09:0,27,349	0/0:18,0:18:42.06:0,42,466	0/0:32,0:32:62.94:0,63,663	1/1:13,0:13:16.64:91,17,0	0/0:21,0:21:51.13:0,51,598	0/0:20,0:20:53.89:0,54,575	1/1:11,0:11:10.15:79,10,0	1/1:11,0:11:18.80:116,19,0	1/1:18,1:19:29.21:196,29,0	0/0:15,0:15:34.85:0,35,233	0/0:12,0:12:26.87:0,27,292	0/0:13,0:13:26.02:0,26,173	1/1:27,0:27:34.83:287,35,0	0/0:14,0:13:24.02:0,24,249	0/0:19,0:19:48.09:0,48,597	0/0:9,0:9:15.02:0,15,163	1/1:10,1:11:9.48:93,9,0	1/1:12,0:12:18.67:101,19,0	1/1:24,0:23:49.59:286,50,0	0/0:9,0:9:21.06:0,21,254	0/0:18,0:18:48.13:0,48,568	0/0:17,0:17:48.01:0,48,576	0/0:13,0:13:33.09:0,33,399
chr10	89746976	.	C	CT	1838.12	PASS	AB=0.882;AC=24;AF=0.429;AN=56;BaseQRankSum=4.890;DP=483;FS=2.001;HRun=14;HaplotypeScore=65.2074;InbreedingCoeff=0.6482;MQ=61.01;MQ0=10;MQRankSum=0.591;QD=7.63;ReadPosRankSum=3.013;VQSLOD=2.8970;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,22:37:2.23:436,0,2	1/1:3,2:5:3.89:28,4,0	0/1:19,0:6:0:0,0,0	0/0:10,0:6:8.53:0,9,48	1/1:20,0:19:20.40:158,20,0	0/0:13,0:13:29.51:0,30,192	0/0:19,0:20:25.50:0,26,159	0/0:30,1:28:9.34:0,9,176	1/1:13,0:13:16.69:86,17,0	0/0:23,2:25:39.41:0,39,265	0/0:19,1:21:13.09:0,13,195	0/1:11,1:12:0.98:58,0,1	1/1:11,0:11:1.25:89,1,0	1/1:19,0:19:28.64:164,29,0	1/1:10,8:17:11.20:216,11,0	0/0:14,2:16:0.09:0,0,127	1/1:6,12:17:1.73:139,2,0	1/1:24,0:23:52.90:265,53,0	0/0:14,1:14:17.64:0,18,115	0/0:19,0:19:8.02:0,8,239	0/0:7,0:6:8.86:0,9,58	0/1:10,0:10:4.94:38,0,5	1/1:11,0:11:4.41:81,4,0	1/1:23,0:23:48.82:268,49,0	0/0:9,0:10:15.60:0,16,98	0/0:20,0:22:19.85:0,20,219	0/0:17,1:19:19.82:0,20,241	0/0:10,0:13:27.70:0,28,166
chr10	89746977	.	T	TC	2973.55	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-4.584;DP=494;FS=0.000;HRun=1;HaplotypeScore=65.1791;InbreedingCoeff=0.9248;MQ=60.36;MQ0=11;MQRankSum=1.801;QD=19.43;ReadPosRankSum=6.672;VQSLOD=3.6524;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:32.63:0,33,318	0/0:5,0:5:4.71:0,5,28	0/0:19,0:6:17.59:0,18,151	0/0:10,0:6:7.79:0,8,63	1/1:8,12:19:40.96:477,41,0	0/0:13,0:13:30.09:0,30,397	0/0:20,0:20:47.95:0,48,513	0/0:32,0:29:66.90:0,67,739	1/1:2,12:14:17.98:214,18,0	0/0:24,0:24:60.12:0,60,697	0/0:21,0:21:54.31:0,54,583	1/1:4,11:15:15.43:189,15,0	1/1:5,7:12:22.27:245,22,0	1/1:6,14:20:29.96:353,30,0	0/0:18,0:17:15.49:0,15,130	0/0:16,0:16:39.85:0,40,415	0/0:18,0:17:2.37:0,2,83	1/1:3,21:23:39.22:660,39,0	0/0:15,0:13:33.03:0,33,339	0/0:19,0:19:50.12:0,50,627	0/0:8,0:6:15.02:0,15,172	1/1:3,8:11:14.91:181,15,0	1/1:0,11:11:20.41:230,20,0	1/1:4,22:25:51.16:635,51,0	0/0:10,0:10:21.02:0,21,254	0/0:23,0:23:54.93:0,55,619	0/0:20,0:20:48.53:0,49,600	0/0:13,0:13:32.97:0,33,391
chr10	89747186	.	CT	C	715.55	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=11.480;DP=451;FS=0.000;HRun=5;HaplotypeScore=78.7197;InbreedingCoeff=0.8658;MQ=63.03;MQ0=4;MQRankSum=-9.467;QD=5.38;ReadPosRankSum=-0.756;VQSLOD=-0.6342;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:78.26:0,78,1065	0/0:11,0:11:33.11:0,33,451	0/0:21,0:10:29.95:0,30,323	0/1:18,0:8:13.44:13,0,127	1/1:15,0:14:25.42:180,25,0	0/0:16,0:16:36.12:0,36,492	0/0:25,0:25:57.10:0,57,723	0/0:19,0:19:54.18:0,54,738	1/1:18,1:18:17.70:111,18,0	0/0:18,0:18:51.17:0,51,695	0/0:12,0:12:36.08:0,36,471	1/1:11,1:11:11.51:45,12,0	1/1:7,0:7:7.21:25,7,0	1/1:14,0:14:24.48:150,24,0	0/0:24,0:24:51.17:0,51,698	0/0:7,0:7:15.05:0,15,205	0/0:24,0:23:51.09:0,51,658	1/1:11,1:12:15.75:76,16,0	0/0:23,0:23:66.22:0,66,902	0/0:22,0:22:54.14:0,54,711	0/0:8,0:7:21.05:0,21,270	1/1:9,1:9:17.37:109,17,0	1/1:14,5:19:33.62:206,34,0	1/1:7,0:7:0.47:1,0,0	0/0:12,0:12:33.11:0,33,451	0/0:12,0:12:36.11:0,36,471	0/0:20,0:20:42.11:0,42,551	0/0:12,0:12:33.09:0,33,434
chr10	89747189	.	TTTCTA	T	3936.78	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=7.395;DP=448;FS=0.522;HRun=0;HaplotypeScore=96.1825;InbreedingCoeff=0.9541;MQ=62.59;MQ0=5;MQRankSum=-10.009;QD=35.15;ReadPosRankSum=-0.708;VQSLOD=3.4066;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:78.26:0,78,2147	0/0:11,0:11:33.11:0,33,933	0/0:23,0:10:21.41:0,21,456	0/0:18,0:8:16.54:0,17,297	1/1:3,12:14:30.10:615,30,0	0/0:16,0:16:36.12:0,36,1030	0/0:24,0:24:57.19:0,57,1469	0/0:21,0:21:60.21:0,60,1662	1/1:4,13:16:21.07:419,21,0	0/0:18,0:18:54.19:0,54,1619	0/0:12,0:12:36.08:0,36,1050	1/1:4,9:12:24.05:428,24,0	1/1:4,2:6:8.89:195,9,0	1/1:1,13:14:30.10:626,30,0	0/0:22,0:22:51.18:0,51,1435	0/0:6,0:6:15.05:0,15,467	0/0:23,0:22:51.36:0,51,1284	1/1:8,4:12:18.06:383,18,0	0/0:24,0:24:72.25:0,72,1948	0/0:21,0:21:60.20:0,60,1575	0/0:8,0:7:21.05:0,21,534	1/1:1,7:7:21.07:441,21,0	1/1:8,11:19:38.96:777,39,0	1/1:0,7:7:3.01:53,3,0	0/0:12,0:12:33.11:0,33,1032	0/0:12,0:12:36.11:0,36,965	0/0:21,0:21:45.14:0,45,1131	0/0:12,0:12:33.10:0,33,952
chr10	89747191	.	TCTATC	T	2931.14	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=10.468;DP=453;FS=0.000;HRun=0;HaplotypeScore=99.7042;InbreedingCoeff=0.9481;MQ=61.96;MQ0=8;MQRankSum=-9.694;QD=26.65;ReadPosRankSum=-0.637;VQSLOD=2.9708;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:75.38:0,75,1678	0/0:11,0:11:33.11:0,33,709	0/0:23,0:10:19.11:0,19,346	0/0:17,0:8:9.60:0,10,232	1/1:13,1:13:30.10:496,30,0	0/0:16,0:16:36.12:0,36,816	0/0:23,0:23:57.15:0,57,1161	0/0:21,0:21:60.10:0,60,1349	1/1:15,0:15:21.07:348,21,0	0/0:19,0:18:54.18:0,54,1368	0/0:12,0:12:33.02:0,33,876	1/1:12,1:12:23.91:346,24,0	1/1:2,3:5:8.96:167,9,0	1/1:13,0:13:30.10:470,30,0	0/0:22,0:22:51.18:0,51,1119	0/0:7,0:7:18.06:0,18,455	0/0:27,0:25:45.93:0,46,965	1/1:8,5:13:18.06:313,18,0	0/0:26,0:25:75.25:0,75,1605	0/0:22,0:22:60.07:0,60,1229	0/0:7,0:6:18.06:0,18,406	1/1:8,0:7:21.07:331,21,0	1/1:19,1:19:39.03:631,39,0	1/1:8,0:8:3.01:36,3,0	0/0:12,0:12:32.99:0,33,868	0/0:12,0:12:36.11:0,36,839	0/0:22,0:22:47.95:0,48,919	0/0:11,0:11:30.10:0,30,788
chr10	89747192	.	CTATCT	C	1805.26	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.185;DP=454;FS=0.000;HRun=0;HaplotypeScore=103.7216;InbreedingCoeff=0.9509;MQ=61.88;MQ0=8;MQRankSum=-9.849;QD=16.41;ReadPosRankSum=-0.024;VQSLOD=2.5871;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:79.04:0,79,1421	0/0:11,0:11:33.11:0,33,575	0/0:23,0:10:21.48:0,21,340	0/0:18,0:8:15.97:0,16,236	1/1:14,0:13:30.07:319,30,0	0/0:17,0:17:36.12:0,36,655	0/0:23,0:23:54.18:0,54,940	0/0:21,0:21:60.20:0,60,1066	1/1:15,1:15:21:229,21,0	0/0:19,0:18:54.17:0,54,1283	0/0:13,0:13:33.11:0,33,832	1/1:12,1:12:20.90:228,21,0	1/1:5,0:5:8.89:107,9,0	1/1:13,0:13:14.09:273,14,0	0/0:22,0:22:51.17:0,51,980	0/0:7,0:7:18.06:0,18,450	0/0:26,0:24:46.94:0,47,855	1/1:12,1:13:17.99:211,18,0	0/0:26,0:25:72.20:0,72,1225	0/0:22,0:22:59.93:0,60,1004	0/0:7,0:6:18.06:0,18,340	1/1:8,0:7:20.99:201,21,0	1/1:18,1:19:38.82:425,39,0	1/1:8,0:8:2.96:19,3,0	0/0:12,0:12:33.11:0,33,871	0/0:12,0:12:33.10:0,33,830	0/0:22,0:22:48.01:0,48,779	0/0:11,0:11:30.08:0,30,759
chr10	89747193	.	TATC	T	1406.49	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.304;DP=453;FS=0.520;HRun=0;HaplotypeScore=90.2504;InbreedingCoeff=0.9452;MQ=60.67;MQ0=9;MQRankSum=-9.710;QD=12.79;ReadPosRankSum=-0.215;VQSLOD=2.7187;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:77.30:0,77,1129	0/0:11,0:11:33.04:0,33,464	0/0:22,0:9:9.67:0,10,244	0/0:18,0:8:15.96:0,16,185	1/1:14,0:13:29.65:281,30,0	0/0:17,0:17:36.08:0,36,549	0/0:23,0:23:53.90:0,54,774	0/0:21,0:21:60.18:0,60,939	1/1:15,1:15:19.78:195,20,0	0/0:19,0:18:42.29:0,42,950	0/0:13,0:13:33.11:0,33,626	1/1:12,1:12:21.86:162,22,0	1/1:5,0:5:8.77:55,9,0	1/1:13,0:13:28.21:250,28,0	0/0:23,0:22:51.06:0,51,754	0/0:7,0:7:18.06:0,18,344	0/0:26,0:24:44.69:0,45,618	1/1:13,0:13:17.70:135,18,0	0/0:25,0:24:72.22:0,72,1098	0/0:22,0:22:59.92:0,60,831	0/0:7,0:6:18.06:0,18,270	1/1:7,1:7:19.55:170,20,0	1/1:17,3:19:37.86:357,38,0	1/1:8,0:8:1.82:5,2,0	0/0:12,0:12:33.08:0,33,626	0/0:12,0:12:33.03:0,33,598	0/0:22,0:22:46.29:0,46,617	0/0:11,0:11:30.08:0,30,569
chr10	89747196	.	CT	C	1474.51	PASS	AB=0.812;AC=21;AF=0.375;AN=56;BaseQRankSum=-2.868;DP=484;FS=31.910;HRun=15;HaplotypeScore=82.2472;InbreedingCoeff=0.4387;MQ=57.75;MQ0=11;MQRankSum=6.036;QD=5.02;ReadPosRankSum=4.042;VQSLOD=0.3181;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:13,18:32:5.18:228,0,5	1/1:5,4:11:18.77:107,19,0	0/0:22,0:9:11:0,11,69	0/0:17,0:7:2.02:0,2,20	0/0:15,0:14:14.29:0,14,90	0/1:7,9:17:6.63:82,0,7	1/1:10,13:24:25.49:159,25,0	1/1:12,12:24:26.11:166,26,0	0/1:20,0:19:6.41:6,0,59	0/0:20,1:20:7.73:0,8,192	0/0:13,1:14:1.67:0,2,128	0/0:16,0:15:4.39:0,4,104	0/0:6,0:6:11.56:0,12,70	0/0:13,0:13:16.21:0,16,132	1/1:5,18:23:14.12:210,14,0	0/0:8,0:8:14.95:0,15,124	0/1:11,15:24:23.99:138,0,24	0/1:16,0:15:3.76:4,0,66	1/1:14,9:23:10.16:176,10,0	1/1:7,12:22:29.56:171,30,0	0/1:6,1:7:7.99:45,0,8	0/0:14,0:13:18.18:0,18,126	0/1:22,0:21:1.59:2,0,69	0/0:9,0:9:3:0,3,25	0/0:12,0:12:26.86:0,27,222	0/0:11,1:11:13.65:0,14,231	1/1:7,13:21:27.59:165,28,0	0/0:11,0:11:17.95:0,18,146
chr10	89747826	.	CT	C	2909.31	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=4.725;DP=512;FS=13.790;HRun=1;HaplotypeScore=104.1699;InbreedingCoeff=0.9879;MQ=77.89;MQ0=2;MQRankSum=-0.677;QD=32.69;ReadPosRankSum=-5.386;VQSLOD=0.9006;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.27:0,84,1300	0/0:11,0:11:27.09:0,27,432	0/0:27,1:20:51.05:0,51,766	0/0:26,1:18:36.29:0,36,487	1/1:17,4:21:62.79:752,63,0	0/0:21,0:21:51.17:0,51,720	0/0:20,0:20:51.17:0,51,736	0/0:23,0:23:41.33:0,41,947	1/1:6,4:10:30.04:352,30,0	0/0:21,0:21:63.19:0,63,980	0/0:24,0:24:69.24:0,69,1097	1/1:6,2:8:24.08:327,24,0	1/1:6,2:8:23.05:258,23,0	1/1:5,4:9:27.03:321,27,0	0/0:15,0:15:42.14:0,42,656	0/0:21,0:21:63.21:0,63,1004	0/0:22,0:22:57.19:0,57,896	1/1:2,4:6:18.03:209,18,0	0/0:20,0:20:60.20:0,60,927	0/0:33,0:33:93.31:0,93,1324	0/0:8,0:8:24.08:0,24,381	1/1:8,2:10:30.09:383,30,0	1/1:6,6:12:33.10:428,33,0	1/1:3,2:5:9.01:94,9,0	0/0:31,0:31:93.32:0,93,1473	0/0:32,0:32:96.33:0,96,1521	0/0:22,0:22:60.20:0,60,875	0/0:11,0:11:33.11:0,33,527
chr10	89747894	.	CA	C	534.59	PASS	AB=0.943;AC=14;AF=0.250;AN=56;BaseQRankSum=13.153;DP=576;FS=1.835;HRun=5;HaplotypeScore=133.4553;InbreedingCoeff=0.7017;MQ=55.57;MQ0=4;MQRankSum=-10.474;QD=3.61;ReadPosRankSum=2.047;VQSLOD=-0.3053;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:58.22:0,58,816	0/0:8,0:8:24.08:0,24,322	0/0:22,0:14:19.16:0,19,344	0/0:25,0:12:25.20:0,25,261	1/1:20,2:21:29.29:124,29,0	0/0:20,0:20:42.12:0,42,552	0/0:15,0:15:27.02:0,27,316	0/0:30,0:30:81.25:0,81,1077	1/1:14,1:15:12.46:73,12,0	0/0:42,0:42:99:0,126,1722	0/0:27,0:27:75.22:0,75,993	1/1:13,2:15:25.60:130,26,0	1/1:14,2:16:6.41:89,6,0	1/1:10,0:9:11.93:40,12,0	0/0:18,0:18:45.06:0,45,577	0/0:20,0:20:57.18:0,57,763	0/0:25,0:24:23.91:0,24,592	0/1:14,1:14:2.11:71,0,2	0/0:11,0:10:19.31:0,19,316	0/0:35,0:35:90.21:0,90,1180	0/0:10,0:10:30.10:0,30,410	0/1:18,1:19:6.42:68,0,6	0/1:23,1:23:3.96:74,0,4	0/1:11,1:12:4.54:45,0,5	0/0:29,0:29:84.28:0,84,1143	0/0:35,0:35:96.32:0,96,1312	0/0:27,0:27:45.15:0,45,613	0/0:5,0:5:15.05:0,15,205
chr10	89747896	.	AAAAC	A	5968.18	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=10.899;DP=580;FS=2.831;HRun=0;HaplotypeScore=145.3694;InbreedingCoeff=0.9933;MQ=55.85;MQ0=4;MQRankSum=-10.094;QD=39.79;ReadPosRankSum=0.947;VQSLOD=5.3566;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:61.50:0,61,1429	0/0:8,0:8:24.08:0,24,591	0/0:22,0:14:38.85:0,39,631	0/0:25,0:12:18.63:0,19,334	1/1:7,15:21:48.16:872,48,0	0/0:21,0:21:45.09:0,45,938	0/0:15,0:15:24.08:0,24,543	0/0:30,0:30:81.27:0,81,1795	1/1:4,12:16:41.95:685,42,0	0/0:42,0:42:99:0,126,3023	0/0:27,0:27:75.25:0,75,1771	1/1:6,11:17:32.74:724,33,0	1/1:5,12:17:30.48:823,30,0	1/1:2,7:9:18.06:335,18,0	0/0:19,0:19:48.05:0,48,966	0/0:20,0:20:57.18:0,57,1316	0/0:24,0:23:54.08:0,54,1046	1/1:6,8:14:29.73:445,30,0	0/0:13,0:11:32.09:0,32,543	0/0:33,0:33:84.28:0,84,1955	0/0:11,0:11:33.11:0,33,748	1/1:4,15:19:48.06:820,48,0	1/1:5,19:23:51.91:947,52,0	1/1:5,7:12:19.31:317,19,0	0/0:31,0:31:90.21:0,90,1888	0/0:33,0:33:96.33:0,96,2268	0/0:27,0:27:45.15:0,45,1027	0/0:5,0:5:15.05:0,15,385
chr10	89747906	.	A	AAG	2112.90	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.374;DP=578;FS=0.379;HRun=0;HaplotypeScore=130.6184;InbreedingCoeff=0.9805;MQ=57.38;MQ0=1;MQRankSum=-8.290;QD=14.67;ReadPosRankSum=1.460;VQSLOD=3.7318;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.66:0,70,1007	0/0:10,0:10:30.08:0,30,420	0/0:20,0:12:35.70:0,36,442	0/0:19,0:12:11.67:0,12,220	1/1:18,2:20:52.10:402,52,0	0/0:22,0:22:48.11:0,48,704	0/0:17,0:17:36.03:0,36,478	0/0:31,0:31:87.29:0,87,1319	1/1:15,2:17:19.96:239,20,0	0/0:39,0:39:99:0,117,1787	0/0:26,0:26:78.25:0,78,1156	1/1:15,4:19:43.06:436,43,0	1/1:14,3:17:8.82:272,9,0	1/1:8,0:8:15.15:89,15,0	0/0:19,0:19:47.51:0,48,674	0/0:20,0:20:57.18:0,57,850	0/0:26,0:27:59.87:0,60,846	1/1:8,1:8:20.14:219,20,0	0/0:19,0:18:44.94:0,45,575	0/0:30,0:30:87.25:0,87,1277	0/0:11,0:11:33.11:0,33,504	1/1:18,1:19:43.63:290,44,0	1/1:21,1:22:41.94:220,42,0	1/1:12,1:13:22.63:159,23,0	0/0:27,0:27:76.61:0,77,1190	0/0:30,0:30:87.30:0,87,1331	0/0:31,0:31:60.08:0,60,826	0/0:10,0:10:30.09:0,30,437
chr10	89749363	.	AG	A	295.14	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.922;DP=449;FS=8.946;HRun=2;HaplotypeScore=45.4699;InbreedingCoeff=0.9727;MQ=87.00;MQ0=0;MQRankSum=-2.560;QD=29.51;ReadPosRankSum=0.759;VQSLOD=2.2172;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.27:0,81,1200	0/0:5,0:5:15.05:0,15,224	0/0:9,0:9:23.87:0,24,357	0/0:22,0:22:61.52:0,62,789	0/0:14,0:14:39.13:0,39,584	0/0:11,0:11:30.10:0,30,449	0/0:13,0:13:39.13:0,39,581	0/0:21,0:21:63.19:0,63,906	0/0:26,0:26:78.25:0,78,1148	0/0:10,0:10:30.10:0,30,449	0/0:8,0:8:21.07:0,21,315	0/0:18,0:18:54.18:0,54,810	0/0:17,0:17:51.17:0,51,764	0/0:15,0:15:45.15:0,45,675	0/0:18,0:17:54.18:0,54,809	0/0:14,0:14:42.14:0,42,630	0/0:20,0:20:60.20:0,60,899	0/0:13,0:13:33.11:0,33,495	0/0:23,0:23:63.20:0,63,919	0/0:12,0:12:36.10:0,36,517	0/0:23,0:23:69.23:0,69,1034	0/0:14,0:14:42.13:0,42,605	0/0:18,0:18:54.14:0,54,775	0/0:29,0:29:84.28:0,84,1253	0/0:7,0:7:21.07:0,21,315	0/0:15,0:15:45.15:0,45,674	0/0:16,0:16:45.14:0,45,653	1/1:0,10:10:30.10:390,30,0
chr10	89749463	.	AATATATAT	A	382.35	PASS	AC=12;AF=0.316;AN=38;BaseQRankSum=0.835;DP=176;FS=0.000;HRun=0;HaplotypeScore=56.8783;InbreedingCoeff=0.5489;MQ=70.19;MQ0=3;MQRankSum=1.041;QD=8.89;ReadPosRankSum=2.748;VQSLOD=1.3528;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:5.99:0,6,95	./.	./.	./.	1/1:6,1:7:3.01:78,3,0	0/0:1,0:3:3.01:0,3,72	./.	0/0:18,0:17:36.11:0,36,1087	1/1:12,0:13:16.26:248,16,0	0/0:7,0:7:15.05:0,15,456	0/0:4,0:4:3.48:0,3,95	./.	1/1:2,5:7:2.90:16,3,0	0/0:6,0:10:0.47:0,0,1	./.	0/0:6,0:6:9.50:0,10,328	0/0:19,0:19:22.38:0,22,463	1/1:2,3:5:1.73:72,2,0	./.	./.	0/0:4,0:3:6.02:0,6,146	1/1:2,0:2:3.01:78,3,0	0/0:5,4:10:0.47:0,0,1	1/1:2,4:8:2.84:14,3,0	0/0:6,0:6:13.60:0,14,429	0/0:9,0:9:6.02:0,6,202	./.	0/0:5,0:5:12.04:0,12,379
chr10	89750615	.	C	CCCTCCCTCCCTT	14649.58	PASS	AB=0.965;AC=38;AF=0.704;AN=54;BaseQRankSum=-7.029;DP=358;FS=18.059;HRun=0;HaplotypeScore=126.5534;InbreedingCoeff=-0.1518;MQ=60.50;MQ0=12;MQRankSum=-0.793;QD=45.35;ReadPosRankSum=7.053;VQSLOD=3.0033;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:9:16.05:170,0,16	1/1:5,0:5:8.86:76,9,0	0/1:29,0:8:20.35:20,0,33	0/0:33,0:17:8.28:0,8,67	1/1:9,0:8:15.04:319,15,0	1/1:9,4:13:39.04:1364,39,0	1/1:1,15:20:9.03:461,9,0	1/1:15,0:15:39.07:630,39,0	1/1:17,0:16:6.15:1227,6,0	0/1:5,0:5:20.26:20,0,73	0/1:2,0:2:18.97:46,0,19	1/1:18,0:18:17.68:1259,18,0	0/1:13,0:13:9.77:712,0,10	1/1:8,0:7:21.07:709,21,0	0/1:10,0:10:15.67:181,0,16	1/1:2,0:2:3.01:158,3,0	0/1:7,0:7:74.05:74,0,161	0/1:8,0:7:7.98:200,0,8	0/1:4,6:12:11.09:949,0,11	1/1:4,8:13:18.01:643,18,0	0/1:22,0:22:92.90:427,0,93	1/1:14,0:14:8.14:1175,8,0	0/1:14,0:12:25.60:415,0,26	0/1:20,0:19:99:509,0,221	0/0:1,0:1:3:0,3,25	1/1:9,0:9:24.02:323,24,0	1/1:17,8:26:66.65:2583,67,0	./.
chr10	89750640	.	CCCTTCCTTCCTTCCTT	C	2430.78	PASS	AB=0.796;AC=29;AF=0.690;AN=42;BaseQRankSum=1.170;DP=349;FS=8.656;HRun=0;HaplotypeScore=143.3120;InbreedingCoeff=0.1913;MQ=51.41;MQ0=17;MQRankSum=-2.918;QD=11.20;ReadPosRankSum=0.390;VQSLOD=2.2129;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:8:3.01:54,3,0	0/1:3,1:3:99:124,0,152	./.	./.	1/1:4,0:9:3.15:12,3,0	1/1:10,7:17:3.01:130,3,0	0/1:21,0:21:95.56:96,0,154	./.	1/1:11,0:17:3.01:112,3,0	0/0:9,0:8:12.04:0,12,505	0/0:4,0:4:0:0,0,0	1/1:9,0:19:6.02:222,6,0	1/1:5,0:14:9.03:335,9,0	./.	0/1:3,7:10:35.74:124,0,36	0/0:3,0:2:3.01:0,3,153	0/0:5,0:4:6.02:0,6,195	1/1:1,0:6:3.01:112,3,0	./.	1/1:8,2:10:9.03:206,9,0	1/1:11,0:10:6.02:79,6,0	1/1:10,0:12:3.01:112,3,0	1/1:8,4:10:3.01:40,3,0	1/1:11,7:17:5.08:169,5,0	./.	0/0:9,0:8:0:0,0,0	1/1:15,11:26:15.05:628,15,0	./.
chr10	89750993	.	TAC	T	720.48	PASS	AB=0.919;AC=20;AF=0.400;AN=50;BaseQRankSum=3.694;DP=630;FS=5.774;HRun=0;HaplotypeScore=93.4074;InbreedingCoeff=0.3607;MQ=60.23;MQ0=10;MQRankSum=1.052;QD=2.50;ReadPosRankSum=-0.236;VQSLOD=1.4723;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:17.97:0,18,161	./.	./.	./.	1/1:23,1:23:5.75:44,6,0	0/0:27,0:27:15.04:0,15,198	0/1:24,0:25:12.17:12,0,252	0/1:22,0:21:12.49:12,0,30	1/1:16,1:17:17.52:140,18,0	0/0:23,0:21:14.07:0,14,150	0/0:14,0:14:6.01:0,6,63	1/1:23,2:26:22.22:132,22,0	1/1:12,6:18:0.07:108,0,0	0/1:22,0:22:35.68:38,0,36	0/0:22,0:20:8.85:0,9,70	0/1:20,2:22:41.30:41,0,206	0/0:39,0:39:32.44:0,32,379	1/1:14,0:17:16.51:85,17,0	0/0:14,0:14:8.26:0,8,66	0/0:19,0:18:12:0,12,148	0/0:60,0:60:24.67:0,25,303	0/1:13,8:21:23.97:24,0,35	1/1:10,0:10:2.84:14,3,0	1/1:21,16:38:21.07:236,21,0	0/0:14,0:14:9.92:0,10,123	0/1:20,0:20:1.21:1,0,104	0/0:14,0:14:11.76:0,12,123	0/0:7,0:6:3.90:0,4,46
chr10	89751350	.	G	GAC	1727.61	PASS	AB=0.849;AC=33;AF=0.635;AN=52;BaseQRankSum=-1.323;DP=574;FS=5.107;HRun=0;HaplotypeScore=90.1329;InbreedingCoeff=-0.2053;MQ=57.26;MQ0=6;MQRankSum=-0.913;QD=3.97;ReadPosRankSum=-2.350;VQSLOD=1.5878;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:36:8.56:0,9,49	0/0:7,0:9:8.81:0,9,76	./.	./.	1/1:10,6:17:3.01:44,3,0	0/1:10,0:19:20.11:20,0,22	1/1:23,1:28:1.72:3,2,0	1/1:19,0:19:8.93:62,9,0	0/1:11,9:20:40.68:73,0,41	0/1:10,9:24:18.71:212,0,19	1/1:10,0:10:2.94:25,3,0	0/1:7,4:14:42.20:114,0,42	0/1:19,0:19:30.93:78,0,31	0/1:15,1:17:50.76:51,0,64	0/1:16,0:15:10.91:11,0,84	0/1:8,0:8:18.90:19,0,26	0/0:25,0:26:17.69:0,18,148	1/1:28,4:30:31.60:370,32,0	0/1:7,2:9:6.48:55,0,6	1/1:11,1:19:2.80:26,3,0	1/1:21,1:25:6:53,6,0	0/1:27,0:26:19.99:75,0,20	0/1:7,0:7:13.95:14,0,26	0/1:24,7:31:58.83:155,0,59	1/1:15,3:18:3.01:43,3,0	0/1:15,9:25:25.61:223,0,26	1/1:9,0:18:6.48:68,6,0	1/1:9,0:9:8.99:87,9,0
chr10	89754033	.	TACACAC	T	477.22	PASS	AB=1.000;AC=23;AF=0.719;AN=32;BaseQRankSum=2.839;DP=430;FS=15.199;HRun=0;HaplotypeScore=95.1256;InbreedingCoeff=0.2835;MQ=65.20;MQ0=17;MQRankSum=-2.984;QD=2.57;ReadPosRankSum=-0.995;VQSLOD=0.5222;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:23:3:37,3,0	1/1:7,2:7:3.01:60,3,0	./.	./.	./.	1/1:16,0:17:3.01:42,3,0	./.	./.	./.	0/0:14,0:14:5.98:0,6,68	./.	1/1:4,0:6:3.01:42,3,0	1/1:7,0:9:3.01:42,3,0	./.	1/1:15,3:18:3.01:60,3,0	0/1:13,0:10:46.94:47,0,139	1/1:19,3:22:6.02:120,6,0	1/1:17,0:18:3.01:42,3,0	./.	1/1:7,0:10:3.01:42,3,0	./.	./.	./.	1/1:23,0:22:2.94:18,3,0	0/0:18,0:18:15.05:0,15,261	0/0:8,0:8:6.02:0,6,157	1/1:13,0:14:2.43:41,2,0	0/0:1,0:1:2.80:0,3,13
chr10	89756237	.	C	CA	4093.26	PASS	AB=0.701;AC=38;AF=0.679;AN=56;BaseQRankSum=1.137;DP=719;FS=4.948;HRun=14;HaplotypeScore=110.6495;InbreedingCoeff=0.6651;MQ=75.49;MQ0=0;MQRankSum=-1.114;QD=7.40;ReadPosRankSum=-3.143;VQSLOD=2.0070;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,55:64:89.36:773,89,0	1/1:1,8:10:21.26:164,21,0	0/0:34,0:27:7.84:0,8,74	0/0:18,0:16:7.66:0,8,36	1/1:10,16:27:14.47:227,14,0	1/1:12,1:27:28.49:146,28,0	1/1:7,0:16:24.26:127,24,0	1/1:15,0:28:57.81:325,58,0	1/1:7,22:30:10.73:218,11,0	0/0:28,2:30:20.67:0,21,261	0/0:21,1:23:13.14:0,13,208	1/1:8,24:33:16.08:123,16,0	1/1:12,0:25:8.24:39,8,0	0/1:6,11:17:0.03:113,0,0	0/1:7,15:22:14.52:202,0,15	0/1:20,0:20:9:9,0,173	1/1:11,29:40:17.01:375,17,0	1/1:2,14:16:18:158,18,0	1/1:17,1:26:35.66:209,36,0	1/1:11,1:19:22.98:125,23,0	1/1:7,1:25:28.41:142,28,0	0/1:10,18:29:22.20:189,0,22	1/1:7,1:22:26.16:121,26,0	1/1:8,4:36:37.28:202,37,0	0/0:11,0:12:19.64:0,20,118	0/0:22,0:24:39.27:0,39,242	1/1:18,0:21:20.59:106,21,0	0/0:23,0:23:37.71:0,38,249
chr10	89756761	.	G	GA	3150.50	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-8.119;DP=530;FS=2.274;HRun=11;HaplotypeScore=63.2746;InbreedingCoeff=0.9522;MQ=88.24;MQ0=0;MQRankSum=-3.594;QD=21.88;ReadPosRankSum=-3.281;VQSLOD=3.3505;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:71.72:0,72,557	0/0:11,0:12:27.97:0,28,196	0/0:26,0:27:10.42:0,10,210	0/0:15,0:15:12.27:0,12,146	0/0:12,0:12:32.85:0,33,255	1/1:0,18:19:50.94:502,51,0	1/1:6,7:14:32.85:308,33,0	1/1:5,24:29:72.09:719,72,0	0/0:20,0:20:53.66:0,54,407	0/0:35,1:36:50.14:0,50,568	0/0:9,0:10:29.07:0,29,211	0/0:21,1:22:9.28:0,9,248	0/0:9,0:9:11.89:0,12,91	0/0:10,0:11:28.93:0,29,215	0/0:19,1:20:14.37:0,14,295	0/0:22,1:24:31.31:0,31,414	0/0:23,1:24:17.34:0,17,314	0/0:27,0:27:68.69:0,69,530	1/1:6,8:14:15.85:336,16,0	1/1:10,16:29:45.60:590,46,0	1/1:5,10:16:33.78:362,34,0	0/0:20,0:20:39.90:0,40,334	0/0:16,0:16:40.88:0,41,307	0/0:7,0:7:20.92:0,21,163	0/0:18,0:20:40.85:0,41,306	0/0:17,0:17:35.85:0,36,278	1/1:6,14:23:56.65:530,57,0	0/0:5,0:5:8.93:0,9,70
chr10	89756832	.	G	GA	10164.53	PASS	AB=0.579;AC=37;AF=0.661;AN=56;BaseQRankSum=-9.572;DP=584;FS=22.659;HRun=9;HaplotypeScore=63.4557;InbreedingCoeff=0.8865;MQ=74.39;MQ0=0;MQRankSum=-2.185;QD=24.67;ReadPosRankSum=-0.800;VQSLOD=3.3067;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:29:54.15:597,54,0	1/1:3,9:12:23.93:247,24,0	0/0:9,0:8:20.95:0,21,176	0/0:13,0:13:7.79:0,8,136	1/1:1,28:29:69.15:750,69,0	0/0:16,0:16:26.96:0,27,230	1/1:0,9:9:24.06:265,24,0	1/1:4,25:29:75.18:812,75,0	1/1:3,30:33:87.17:947,87,0	0/0:34,0:35:73.99:0,74,629	0/0:24,0:24:62.94:0,63,538	1/1:2,16:18:39.11:431,39,0	1/1:3,18:21:25.08:498,25,0	1/1:2,11:13:27.07:299,27,0	1/1:0,21:21:54.15:597,54,0	0/0:27,0:27:71.98:0,72,625	1/1:6,23:29:28.12:538,28,0	1/1:2,21:23:57.15:626,57,0	1/1:3,18:21:51.13:556,51,0	1/1:7,19:27:59.90:617,60,0	0/1:3,8:11:25.03:205,0,25	1/1:3,16:20:50.96:539,51,0	1/1:5,23:28:14.08:612,14,0	1/1:2,15:18:42.45:447,42,0	0/0:25,0:25:62.95:0,63,543	0/0:19,1:20:9.59:0,10,296	1/1:5,15:21:54.12:581,54,0	0/0:3,0:3:9:0,9,78
chr10	89757304	.	AAAAC	A	6384.23	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.614;DP=663;FS=4.444;HRun=0;HaplotypeScore=109.8766;InbreedingCoeff=0.9993;MQ=80.61;MQ0=0;MQRankSum=-5.653;QD=38.46;ReadPosRankSum=-0.535;VQSLOD=4.9422;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:66:99:0,187,4708	0/0:12,0:12:36.11:0,36,820	0/0:19,0:19:51.13:0,51,1070	0/0:34,0:34:94.65:0,95,2198	0/0:27,0:27:72.25:0,72,1856	1/1:0,21:21:60.21:1072,60,0	1/1:2,25:27:51.17:898,51,0	1/1:3,17:20:51.16:873,51,0	0/0:16,0:16:48.16:0,48,1230	0/0:24,0:24:66.23:0,66,1661	0/0:10,0:10:24.08:0,24,591	0/0:27,0:27:78.27:0,78,2010	0/0:19,0:19:54.19:0,54,1378	0/0:23,0:23:63.22:0,63,1624	0/0:29,0:29:78.24:0,78,1949	0/0:24,0:24:69.24:0,69,1725	0/0:31,0:31:93.32:0,93,2359	0/0:18,0:18:51.17:0,51,1264	1/1:7,16:23:48.13:738,48,0	1/1:2,12:14:30.10:517,30,0	1/1:3,29:32:66.23:1179,66,0	0/0:19,0:19:51.18:0,51,1305	0/0:23,0:23:66.23:0,66,1678	0/0:31,0:31:90.31:0,90,2312	0/0:12,0:12:36.10:0,36,797	0/0:24,0:24:69.23:0,69,1699	1/1:5,24:29:63.21:1106,63,0	0/0:9,0:9:27.09:0,27,640
chr10	89758625	.	AACACATGAACACAC	A	4134.40	PASS	AB=0.875;AC=31;AF=0.554;AN=56;BaseQRankSum=3.472;DP=528;FS=3.613;HRun=0;HaplotypeScore=149.6661;InbreedingCoeff=0.3576;MQ=53.65;MQ0=17;MQRankSum=-4.145;QD=12.92;ReadPosRankSum=-0.404;VQSLOD=2.5229;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:38:5.38:113,5,0	1/1:6,0:6:15.03:222,15,0	0/0:48,0:18:12.91:0,13,614	0/0:58,0:24:55.95:0,56,1248	1/1:4,19:23:6.02:121,6,0	0/0:12,0:12:3.01:0,3,102	0/1:17,0:16:17.24:319,0,17	1/1:19,0:19:29.54:409,30,0	1/1:6,0:11:6.02:166,6,0	0/0:12,0:12:36.12:0,36,1456	0/0:14,0:14:32.17:0,32,1249	0/1:16,1:17:9.19:515,0,9	1/1:14,0:14:26.97:570,27,0	1/1:0,8:9:6.02:229,6,0	1/1:6,0:23:0.97:254,1,0	0/0:20,0:20:57.18:0,57,2336	0/1:10,0:27:22.21:175,0,22	1/1:3,0:13:3.01:106,3,0	0/1:12,0:12:99:157,0,130	1/1:8,0:8:3.01:48,3,0	0/1:17,0:17:72.03:272,0,72	1/1:2,14:16:5.77:185,6,0	1/1:3,12:15:5.80:117,6,0	0/1:6,20:26:0:0,0,0	0/0:15,0:15:45.15:0,45,1574	0/0:20,0:20:42.13:0,42,1370	0/1:9,0:9:99:156,0,257	0/0:8,0:8:21.07:0,21,525
chr10	89758629	.	CATGA	C	2961.21	PASS	AB=0.919;AC=32;AF=0.593;AN=54;BaseQRankSum=4.342;DP=514;FS=6.377;HRun=0;HaplotypeScore=90.4659;InbreedingCoeff=0.3044;MQ=53.04;MQ0=19;MQRankSum=-2.820;QD=9.55;ReadPosRankSum=1.043;VQSLOD=1.9476;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:35:3.01:36,3,0	0/1:5,1:6:13.09:174,0,13	0/0:44,0:15:8.62:0,9,594	0/0:56,1:22:55.88:0,56,1233	1/1:20,1:21:5.09:18,5,0	1/1:15,0:15:3.01:46,3,0	1/1:9,7:15:20.37:402,20,0	1/1:6,11:17:18.56:392,19,0	1/1:10,1:11:5.37:44,5,0	0/0:13,0:13:16.02:0,16,746	0/0:13,0:13:35.15:0,35,784	0/1:10,6:16:25.17:400,0,25	1/1:10,4:14:13.54:286,14,0	1/1:9,0:9:6.02:78,6,0	1/1:22,0:22:8.44:122,8,0	0/0:20,0:20:57.18:0,57,1397	0/1:26,1:27:30.25:88,0,30	0/1:15,0:15:9.53:26,0,10	0/1:11,0:11:19.82:147,0,20	1/1:4,3:7:3.01:48,3,0	1/1:19,0:19:10.08:452,10,0	0/1:16,0:16:6.44:30,0,6	0/1:15,0:15:0.01:8,0,0	./.	0/0:15,0:15:45.15:0,45,1024	0/0:18,0:17:43.19:0,43,972	1/1:9,0:9:21.05:325,21,0	0/1:6,0:8:20.95:21,0,261
chr10	89758630	.	ATG	A	1526.91	PASS	AB=0.987;AC=25;AF=0.463;AN=54;BaseQRankSum=7.066;DP=494;FS=4.571;HRun=0;HaplotypeScore=83.2653;InbreedingCoeff=0.1485;MQ=51.90;MQ0=19;MQRankSum=-1.575;QD=5.87;ReadPosRankSum=2.404;VQSLOD=2.5122;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:34:2.84:14,3,0	0/1:5,1:6:7.88:82,0,8	0/0:42,0:13:34.10:0,34,551	0/0:55,0:21:54.80:0,55,993	0/0:21,0:21:3.85:0,4,12	1/1:0,12:12:3.01:34,3,0	1/1:15,1:15:21.06:225,21,0	0/1:15,0:15:87.39:172,0,87	0/1:8,0:8:2.83:9,0,3	0/0:13,0:13:28.65:0,29,632	0/0:12,0:12:36.12:0,36,693	0/1:16,0:16:17.91:225,0,18	0/1:13,0:13:26.71:141,0,27	1/1:9,0:9:5.83:38,6,0	1/1:21,0:21:8.17:62,8,0	0/0:20,0:20:57.18:0,57,1100	0/1:26,0:26:50.16:58,0,50	0/1:14,0:14:1.83:2,0,94	0/1:10,0:10:65.25:65,0,182	1/1:6,1:7:2.99:23,3,0	0/1:19,0:19:19.10:248,0,19	0/1:16,0:16:8.74:9,0,9	0/0:15,0:15:7.37:0,7,49	./.	0/0:15,0:15:45.14:0,45,849	0/0:18,0:17:44.81:0,45,832	1/1:7,2:9:21.07:284,21,0	0/1:8,0:8:3.86:4,0,218
chr10	89759464	.	AT	A	3233.06	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.274;DP=593;FS=3.671;HRun=10;HaplotypeScore=61.6830;InbreedingCoeff=0.9005;MQ=77.58;MQ0=1;MQRankSum=-1.056;QD=19.59;ReadPosRankSum=0.312;VQSLOD=4.5891;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.17:0,63,694	0/0:18,1:19:16.06:0,16,405	0/0:22,0:20:24.35:0,24,244	0/0:13,0:10:9.30:0,9,71	0/0:21,0:22:54.11:0,54,573	1/1:0,24:24:62.99:547,63,0	1/1:1,17:18:44.99:391,45,0	1/1:10,26:36:77.88:662,78,0	0/0:20,0:20:51.13:0,51,556	0/0:18,2:20:2.03:0,2,479	0/0:15,1:17:15.89:0,16,378	0/0:18,0:18:51.12:0,51,553	0/0:18,0:18:45.11:0,45,491	0/0:21,1:22:37.12:0,37,637	0/0:18,0:19:44.94:0,45,470	0/0:21,0:21:57.15:0,57,631	0/0:36,1:37:79.17:0,79,1072	0/0:20,1:21:34.11:0,34,604	1/1:2,15:17:44.99:391,45,0	1/1:4,20:25:62.02:526,62,0	1/1:5,15:20:35.99:313,36,0	0/0:19,1:20:34.11:0,34,605	0/0:19,1:21:5.83:0,6,493	0/0:20,0:20:60.16:0,60,663	0/0:17,2:19:2.92:0,3,473	0/0:29,0:29:72.18:0,72,781	1/1:2,23:25:68.99:599,69,0	0/0:7,0:7:21.02:0,21,213
chr10	89761316	.	TAC	T	1966.80	PASS	AB=0.900;AC=16;AF=0.286;AN=56;BaseQRankSum=8.471;DP=573;FS=3.665;HRun=0;HaplotypeScore=75.1144;InbreedingCoeff=0.2511;MQ=70.61;MQ0=2;MQRankSum=-0.609;QD=7.00;ReadPosRankSum=3.195;VQSLOD=2.9582;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,16:29:1.87:422,2,0	1/1:3,3:6:9.02:105,9,0	0/0:29,0:22:20.20:0,20,289	0/0:29,0:26:38.98:0,39,510	0/0:18,0:18:45.10:0,45,644	0/1:12,1:13:1.78:2,0,412	0/1:17,4:21:40.01:40,0,267	0/0:25,0:24:36.12:0,36,563	0/0:23,0:23:1.14:0,1,479	0/1:15,3:18:7.83:8,0,470	0/0:4,0:4:6.02:0,6,94	0/0:31,1:32:10.65:0,11,602	0/1:20,1:21:15.51:16,0,619	0/0:26,1:27:13.17:0,13,666	1/1:6,21:28:62.69:689,63,0	0/0:24,0:24:54.13:0,54,775	1/1:7,20:28:66.03:748,66,0	0/1:23,3:26:6.84:7,0,779	0/0:16,0:16:25.28:0,25,351	0/0:9,0:9:18.06:0,18,282	0/1:29,1:33:2.85:3,0,758	0/0:14,0:14:21.06:0,21,305	0/0:5,0:5:12.04:0,12,188	0/1:29,4:34:67.72:68,0,823	0/0:13,0:16:39.11:0,39,570	0/0:15,0:15:27.09:0,27,417	0/1:21,2:24:23.92:24,0,688	0/0:5,0:5:12.04:0,12,188
chr10	89762583	.	T	TAC	3173.13	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=3.754;DP=766;FS=9.272;HRun=0;HaplotypeScore=147.9779;InbreedingCoeff=0.8260;MQ=52.60;MQ0=44;MQRankSum=-4.478;QD=14.83;ReadPosRankSum=1.362;VQSLOD=3.3392;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:18.51:0,19,594	0/0:10,0:10:15.02:0,15,166	0/0:91,0:19:17.86:0,18,180	0/0:76,0:22:17.13:0,17,116	0/1:19,0:19:5.92:343,0,6	0/0:17,0:17:39:0,39,389	0/0:33,0:32:75.10:0,75,778	0/0:27,0:26:41.24:0,41,467	1/1:20,5:26:47.73:440,48,0	0/0:19,0:19:30.04:0,30,337	0/0:10,0:10:24.07:0,24,288	1/1:30,0:30:41.74:572,42,0	1/1:14,0:13:26.35:265,26,0	1/1:24,0:24:21.11:441,21,0	0/0:29,0:28:63.03:0,63,670	0/0:21,0:21:40.78:0,41,489	0/0:24,0:24:51.14:0,51,584	1/1:23,0:21:10.26:270,10,0	0/0:17,0:15:15.04:0,15,173	0/0:17,0:18:27.05:0,27,283	0/0:63,0:62:94.42:0,94,937	1/1:20,0:20:20.96:279,21,0	0/1:17,0:17:14.95:198,0,15	1/1:38,3:40:42.11:564,42,0	0/0:19,0:19:38.93:0,39,430	0/0:14,0:14:30.09:0,30,361	0/0:14,0:14:30.05:0,30,314	0/0:13,0:10:16.93:0,17,270
chr10	89762601	.	CCACA	C	5224.37	PASS	AB=0.904;AC=29;AF=0.518;AN=56;BaseQRankSum=7.492;DP=805;FS=8.793;HRun=0;HaplotypeScore=166.0135;InbreedingCoeff=0.6848;MQ=47.64;MQ0=56;MQRankSum=-2.914;QD=12.50;ReadPosRankSum=0.221;VQSLOD=3.5925;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:38:13.70:0,14,1086	0/0:8,0:8:10.52:0,11,239	0/0:85,0:10:9.49:0,9,172	0/0:80,0:10:7.78:0,8,47	1/1:18,0:18:6.05:85,6,0	1/1:13,5:20:27.98:436,28,0	1/1:20,12:34:60.06:872,60,0	0/1:19,13:29:99:396,0,116	1/1:28,0:27:40.90:595,41,0	0/0:19,0:19:50.42:0,50,876	0/0:14,0:13:27.09:0,27,626	1/1:32,0:32:29.27:347,29,0	1/1:17,0:16:30.82:323,31,0	1/1:20,0:25:26.73:351,27,0	0/0:32,0:34:71.35:0,71,1327	0/0:22,0:21:35.57:0,36,679	0/0:20,0:24:47.55:0,48,872	0/1:16,0:15:4.44:104,0,4	1/1:8,3:10:3.01:49,3,0	1/1:8,5:12:24.08:359,24,0	1/1:29,49:76:52.13:843,52,0	1/1:18,0:22:2.64:46,3,0	1/1:14,0:17:3.01:48,3,0	0/1:36,0:36:6.41:78,0,6	0/0:24,0:24:57.19:0,57,1302	0/0:21,0:21:4.65:0,5,773	1/1:10,3:15:23.43:295,23,0	0/0:15,0:12:25.82:0,26,398
chr10	89762604	.	CACA	C	2185.70	PASS	AB=0.903;AC=21;AF=0.375;AN=56;BaseQRankSum=14.464;DP=795;FS=18.569;HRun=0;HaplotypeScore=163.0182;InbreedingCoeff=0.2771;MQ=46.49;MQ0=54;MQRankSum=-4.576;QD=5.68;ReadPosRankSum=1.305;VQSLOD=1.9170;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:67.43:0,67,1508	0/0:6,0:6:18.06:0,18,344	0/0:83,0:12:24.55:0,25,435	0/0:85,0:10:26.61:0,27,317	0/1:12,1:16:25.21:94,0,25	0/1:22,0:22:46.23:46,0,125	0/1:29,0:32:99:113,0,248	0/0:30,0:26:13.48:0,13,657	1/1:11,11:25:32.59:580,33,0	0/0:17,0:17:51.13:0,51,1048	0/0:14,0:13:39.13:0,39,794	1/1:21,8:31:17.17:393,17,0	1/1:11,3:17:30.11:251,30,0	1/1:14,9:24:6.01:300,6,0	0/0:31,0:31:74.62:0,75,1494	0/0:20,0:19:44.73:0,45,908	0/0:25,0:25:62.79:0,63,1178	0/1:17,2:18:41.58:109,0,42	0/0:12,0:10:16.52:0,17,268	0/1:12,0:12:27.70:28,0,94	0/1:79,0:76:89.62:90,0,411	1/1:17,5:22:17.69:107,18,0	0/1:9,7:16:23.07:68,0,23	1/1:26,6:33:2.48:157,2,0	0/0:25,0:25:72.23:0,72,1513	0/0:22,0:22:60.27:0,60,1227	0/1:14,1:15:34.22:34,0,147	0/1:16,0:12:2.67:3,0,562
chr10	89762716	.	TACACAC	T	8200.13	PASS	AB=0.688;AC=36;AF=0.643;AN=56;BaseQRankSum=10.216;DP=701;FS=3.287;HRun=0;HaplotypeScore=177.0480;InbreedingCoeff=0.6853;MQ=50.39;MQ0=8;MQRankSum=-10.610;QD=17.34;ReadPosRankSum=-0.993;VQSLOD=4.2943;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,16:27:25.76:471,26,0	1/1:2,4:6:8.99:148,9,0	0/0:42,0:12:10.28:0,10,193	0/0:54,0:17:28.62:0,29,599	1/1:7,19:26:27.05:471,27,0	1/1:6,0:16:19.88:257,20,0	0/1:15,0:31:2.73:226,0,3	0/1:21,0:37:58.56:414,0,59	1/1:5,13:18:24.08:511,24,0	0/0:33,0:33:72.25:0,72,2125	0/0:13,0:14:36.12:0,36,1023	1/1:9,26:34:48.08:949,48,0	1/1:11,7:18:33.06:651,33,0	1/1:9,4:13:24.02:411,24,0	1/1:6,13:19:27.09:549,27,0	0/0:20,0:20:45.15:0,45,1321	0/1:8,14:22:7.89:413,0,8	0/1:14,5:18:58.10:318,0,58	1/1:8,0:16:18.06:252,18,0	1/1:2,0:24:37.31:467,37,0	1/1:51,0:54:4.70:60,5,0	1/1:10,16:26:36.04:653,36,0	1/1:6,14:21:23.87:433,24,0	1/1:26,3:29:21.01:297,21,0	0/0:20,0:21:42.14:0,42,1110	0/0:28,0:29:60.16:0,60,1693	1/1:4,0:14:18.06:252,18,0	0/0:14,0:14:33.11:0,33,1037
chr10	89762848	.	ATT	A	3509.89	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-6.855;DP=606;FS=3.470;HRun=11;HaplotypeScore=120.2208;InbreedingCoeff=0.9885;MQ=74.02;MQ0=6;MQRankSum=1.811;QD=22.07;ReadPosRankSum=1.294;VQSLOD=2.9780;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:62.99:0,63,445	0/0:13,0:13:28.84:0,29,216	0/0:23,0:12:17.56:0,18,174	0/0:30,0:18:23.45:0,23,200	0/0:38,0:38:82.08:0,82,654	1/1:3,18:20:39.08:414,39,0	1/1:3,12:15:21.03:223,21,0	1/1:6,25:32:78.04:786,78,0	0/0:9,0:9:15.86:0,16,102	0/0:22,0:23:59.64:0,60,837	0/0:18,0:18:27.53:0,28,638	0/0:16,0:16:37.16:0,37,250	0/0:18,0:18:40.28:0,40,327	0/0:18,0:18:41.57:0,42,339	0/0:19,0:19:43.79:0,44,344	0/0:12,0:12:27.09:0,27,403	0/0:29,0:29:59.86:0,60,465	0/0:21,0:21:50.43:0,50,403	1/1:9,16:24:33.22:512,33,0	1/1:4,32:37:92.95:968,93,0	1/1:2,4:6:12.03:128,12,0	0/0:20,0:20:46.51:0,47,389	0/0:30,0:30:73.39:0,73,554	0/0:13,0:13:31.27:0,31,226	0/0:19,0:21:59.15:0,59,797	0/0:26,0:27:68.70:0,69,986	1/1:3,20:23:45.10:479,45,0	0/0:14,0:15:38.50:0,38,562
chr10	89762859	.	TAA	T	5393.24	PASS	AB=0.971;AC=27;AF=0.482;AN=56;BaseQRankSum=4.748;DP=598;FS=22.100;HRun=11;HaplotypeScore=113.8730;InbreedingCoeff=0.9257;MQ=69.81;MQ0=6;MQRankSum=-3.721;QD=18.73;ReadPosRankSum=4.181;VQSLOD=2.1451;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:30:62.78:623,63,0	1/1:1,11:13:26.69:239,27,0	0/1:32,0:15:9.86:10,0,205	0/0:28,0:14:12.47:0,12,127	1/1:4,23:32:83.22:746,83,0	0/0:20,0:19:45.31:0,45,300	0/0:16,0:16:33.73:0,34,315	0/0:31,0:31:60.06:0,60,519	1/1:0,7:8:21.01:210,21,0	0/0:20,0:20:52.02:0,52,719	0/0:19,0:19:29.33:0,29,526	1/1:3,14:17:33.03:335,33,0	1/1:3,12:17:36.02:360,36,0	1/1:6,9:16:29.85:291,30,0	1/1:3,13:16:36.04:363,36,0	0/0:11,0:11:24.08:0,24,360	1/1:4,20:25:54.09:559,54,0	1/1:3,18:21:42.03:421,42,0	0/0:26,0:25:40.03:0,40,334	0/0:36,0:36:86.99:0,87,597	0/0:5,0:5:11.90:0,12,84	1/1:6,11:17:35.94:344,36,0	1/1:5,17:28:48.67:554,49,0	1/1:1,14:15:33.04:337,33,0	0/0:25,0:26:71.60:0,72,1007	0/0:31,1:32:46.72:0,47,1064	0/0:24,0:24:55.62:0,56,449	0/0:16,0:16:45.15:0,45,670
chr10	89764670	.	C	CA	4525.20	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-12.861;DP=611;FS=7.006;HRun=9;HaplotypeScore=56.7400;InbreedingCoeff=0.9972;MQ=75.61;MQ0=0;MQRankSum=-0.124;QD=26.46;ReadPosRankSum=-1.575;VQSLOD=4.7831;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:95.95:0,96,828	0/0:11,0:11:29.99:0,30,260	0/0:12,0:12:17.05:0,17,162	0/0:14,0:14:20.92:0,21,171	0/0:18,0:18:50.99:0,51,443	1/1:2,21:22:54.15:597,54,0	1/1:2,16:18:45.12:498,45,0	1/1:9,31:40:93.20:1006,93,0	0/0:23,0:23:53.97:0,54,469	0/0:25,0:25:65.97:0,66,570	0/0:29,0:29:74.93:0,75,642	0/0:26,0:26:71.98:0,72,625	0/0:21,0:21:62.97:0,63,543	0/0:15,0:15:41.97:0,42,361	0/0:30,0:30:77.93:0,78,664	0/0:21,0:21:56.97:0,57,491	0/0:21,0:21:50.96:0,51,439	0/0:14,0:14:38.88:0,39,323	1/1:6,15:21:45.09:478,45,0	1/1:2,19:21:57.15:630,57,0	1/1:4,24:28:33.12:751,33,0	0/0:22,0:22:53.95:0,54,466	0/0:20,0:20:41.98:0,42,365	0/0:23,0:23:59.99:0,60,521	0/0:17,0:17:47.98:0,48,414	0/0:33,0:33:83.94:0,84,723	1/1:1,19:20:51.14:564,51,0	0/0:11,0:11:32.99:0,33,287
chr10	89766772	.	A	AG	6063.68	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-10.175;DP=422;FS=5.588;HRun=4;HaplotypeScore=44.3342;InbreedingCoeff=0.9321;MQ=74.87;MQ0=1;MQRankSum=2.876;QD=32.60;ReadPosRankSum=6.466;VQSLOD=4.4543;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:32:84.28:1146,84,0	1/1:0,2:2:3.01:41,3,0	0/0:15,0:13:25.14:0,25,217	0/0:19,0:19:28.40:0,28,474	1/1:3,5:8:9.03:123,9,0	0/0:10,0:10:24.07:0,24,272	0/0:28,0:28:78.22:0,78,885	0/0:25,0:25:69.11:0,69,753	1/1:3,14:17:42.14:574,42,0	0/0:19,0:20:54.15:0,54,610	0/0:9,0:9:18.05:0,18,204	1/1:1,17:18:45.15:614,45,0	1/1:1,10:11:27.09:369,27,0	1/1:2,5:7:12.04:164,12,0	1/1:1,9:10:24.08:328,24,0	0/0:7,0:7:21.06:0,21,238	1/1:3,32:34:87.29:1189,87,0	1/1:1,15:16:42.14:575,42,0	0/0:24,0:24:66.15:0,66,729	0/0:11,0:11:24.05:0,24,263	0/0:34,0:33:81.23:0,81,919	1/1:1,10:11:26.88:369,27,0	1/1:2,6:8:15.03:203,15,0	1/1:0,10:10:27.09:369,27,0	0/0:7,0:7:15.04:0,15,170	0/0:12,0:12:33.08:0,33,374	0/0:13,0:13:30.08:0,30,340	0/0:1,0:1:3.01:0,3,34
chr10	89766982	.	GC	G	4410.10	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.523;DP=512;FS=2.228;HRun=4;HaplotypeScore=92.5828;InbreedingCoeff=0.9983;MQ=77.88;MQ0=0;MQRankSum=-1.665;QD=30.00;ReadPosRankSum=-2.469;VQSLOD=3.7076;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1631	0/0:9,0:9:27.09:0,27,376	0/0:10,0:10:29.77:0,30,331	0/0:16,0:16:35:0,35,365	0/0:21,0:21:63.19:0,63,849	1/1:0,23:23:51.15:611,51,0	1/1:2,21:23:51.16:611,51,0	1/1:4,26:29:75.21:886,75,0	0/0:18,0:18:54.18:0,54,756	0/0:21,0:21:60.20:0,60,835	0/0:11,0:11:33.10:0,33,444	0/0:11,0:11:30.10:0,30,420	0/0:13,0:13:39.11:0,39,524	0/0:14,0:14:39.13:0,39,544	0/0:16,0:16:48.16:0,48,666	0/0:7,0:7:21.07:0,21,293	0/0:32,0:32:87.29:0,87,1214	0/0:28,0:28:78.26:0,78,1089	1/1:1,22:23:66.20:791,66,0	1/1:1,15:16:45.14:539,45,0	1/1:2,19:21:57.17:684,57,0	0/0:12,0:12:36.09:0,36,468	0/0:14,0:14:36.12:0,36,503	0/0:29,0:29:72.20:0,72,985	0/0:16,0:16:48.16:0,48,665	0/0:15,0:15:42.14:0,42,587	1/1:1,10:11:24.07:288,24,0	0/0:12,0:12:36.12:0,36,504
chr10	89767574	.	GACACACACACACACACAC	G	5058.88	PASS	AC=14;AF=0.269;AN=52;BaseQRankSum=8.134;DP=705;FS=0.671;HRun=0;HaplotypeScore=276.6517;InbreedingCoeff=0.8256;MQ=59.07;MQ0=11;MQRankSum=-7.251;QD=26.08;ReadPosRankSum=1.802;VQSLOD=3.4854;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:37:33.58:0,34,798	0/0:3,0:6:3.01:0,3,106	0/0:35,0:20:3.01:0,3,98	0/0:40,0:25:14.83:0,15,227	1/1:12,16:28:5.71:32,6,0	0/0:14,0:22:33.11:0,33,829	0/0:30,0:44:24.05:0,24,465	0/0:23,0:23:21.07:0,21,470	1/1:11,27:38:39.10:1773,39,0	0/0:24,0:25:51.12:0,51,2068	0/0:14,0:14:21.07:0,21,1007	1/1:12,23:35:36.05:1502,36,0	1/1:11,13:24:17.31:878,17,0	1/1:7,16:23:11.17:583,11,0	0/0:14,0:22:21.54:0,22,565	0/0:24,0:24:45.13:0,45,2479	0/0:15,0:28:21.07:0,21,512	1/1:8,11:19:3.01:143,3,0	0/0:8,0:11:15.05:0,15,348	0/0:7,0:12:11.02:0,11,178	0/0:39,0:55:39.51:0,40,1070	./.	./.	1/1:7,19:27:3.90:148,4,0	0/0:10,0:13:27.09:0,27,1583	0/0:30,0:29:60.21:0,60,3015	0/0:7,0:17:36.10:0,36,793	0/0:7,0:7:18.06:0,18,522
chr10	89768057	.	AC	A	5631.69	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.496;DP=612;FS=2.119;HRun=1;HaplotypeScore=58.7546;InbreedingCoeff=0.9986;MQ=63.58;MQ0=6;MQRankSum=-1.453;QD=38.31;ReadPosRankSum=-3.986;VQSLOD=3.6928;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1966	0/0:12,0:12:36.12:0,36,572	0/0:13,0:9:26.76:0,27,395	0/0:12,0:8:21.54:0,22,332	0/0:25,0:24:66.23:0,66,1053	1/1:0,21:21:60.20:839,60,0	1/1:0,17:17:47.95:643,48,0	1/1:1,28:28:81.26:1110,81,0	0/0:22,0:22:66.23:0,66,1055	0/0:25,0:25:69.23:0,69,1104	0/0:11,0:11:30.10:0,30,467	0/0:23,0:23:66.22:0,66,1055	0/0:20,0:20:60.20:0,60,955	0/0:20,0:20:60.20:0,60,959	0/0:19,0:19:57.19:0,57,909	0/0:16,0:16:48.16:0,48,767	0/0:45,0:45:99:0,135,2117	0/0:44,0:44:99:0,129,2033	1/1:0,14:14:39.10:523,39,0	1/1:0,23:23:66.22:923,66,0	1/1:1,19:20:51.17:712,51,0	0/0:15,0:15:45.15:0,45,718	0/0:17,0:17:48.01:0,48,766	0/0:19,0:19:54.18:0,54,863	0/0:21,0:20:60.20:0,60,959	0/0:35,0:35:99:0,102,1539	1/1:0,23:23:63.21:881,63,0	0/0:10,0:9:24.08:0,24,384
chr10	89769337	.	GAA	G	4152.37	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=5.820;DP=547;FS=0.369;HRun=12;HaplotypeScore=77.7083;InbreedingCoeff=0.9610;MQ=75.70;MQ0=1;MQRankSum=-1.059;QD=24.43;ReadPosRankSum=-0.920;VQSLOD=3.3225;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.27:0,96,1369	0/0:1,0:7:14.85:0,15,52	0/0:20,0:18:22.77:0,23,265	0/0:15,0:15:3.10:0,3,237	0/0:18,0:18:45.15:0,45,667	1/1:3,17:21:41.79:479,42,0	1/1:4,22:26:57.10:580,57,0	1/1:8,29:38:89.81:860,90,0	0/0:18,0:18:48.16:0,48,714	0/0:21,0:21:51.16:0,51,738	0/0:9,0:11:26.02:0,26,287	0/0:17,0:20:55.64:0,56,723	0/0:18,0:19:50.65:0,51,706	0/0:14,0:14:39.12:0,39,562	0/0:5,0:21:33.12:0,33,132	0/0:21,0:22:60.20:0,60,879	0/0:0,0:21:44.92:0,45,158	0/0:19,0:21:54.18:0,54,783	1/1:0,13:13:39.08:391,39,0	1/1:3,14:17:42.09:427,42,0	1/1:1,21:23:59.86:592,60,0	0/0:6,0:6:15.05:0,15,224	0/0:10,0:10:27.08:0,27,386	0/0:30,0:31:80.76:0,81,1171	0/0:13,0:15:39.13:0,39,565	0/0:18,0:21:56.66:0,57,781	1/1:2,30:32:81.02:823,81,0	0/0:8,0:9:18.03:0,18,213
chr10	89769571	.	CAAA	C	3778.83	PASS	AB=0.557;AC=27;AF=0.482;AN=56;BaseQRankSum=-3.320;DP=447;FS=3.877;HRun=15;HaplotypeScore=81.6882;InbreedingCoeff=0.6105;MQ=73.80;MQ0=4;MQRankSum=-1.681;QD=14.48;ReadPosRankSum=4.103;VQSLOD=2.3107;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,20:30:35.04:459,35,0	1/1:1,5:6:12:135,12,0	0/0:35,0:21:35.09:0,35,451	0/0:23,0:16:16.21:0,16,201	0/1:6,1:24:5.47:5,0,76	1/1:1,16:17:45.12:505,45,0	1/1:3,6:9:17.95:202,18,0	1/1:11,19:31:52.63:603,53,0	0/0:2,0:6:0.98:0,1,3	0/0:11,0:12:21.05:0,21,341	0/0:16,0:16:42.13:0,42,689	0/0:5,0:12:7.48:0,7,17	0/1:2,1:13:20.22:20,0,21	0/0:4,0:11:9.97:0,10,22	1/1:5,7:13:17.86:186,18,0	0/0:14,0:15:40.31:0,40,577	1/1:3,9:15:23.95:282,24,0	0/1:5,2:17:18.03:18,0,43	1/1:4,7:12:19.44:232,19,0	1/1:1,14:15:29.94:336,30,0	1/1:3,13:16:31.29:367,31,0	0/0:4,0:6:1.25:0,1,3	0/1:2,2:18:15.36:16,0,15	0/1:2,0:10:4.64:10,0,5	0/0:15,0:17:36.07:0,36,565	0/0:23,0:24:57.17:0,57,943	1/1:3,12:15:36.04:404,36,0	0/0:7,0:7:21.07:0,21,372
chr10	89770036	.	G	GAAA	3977.74	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-1.540;DP=660;FS=16.231;HRun=10;HaplotypeScore=94.6562;InbreedingCoeff=0.9745;MQ=60.48;MQ0=8;MQRankSum=-4.213;QD=22.10;ReadPosRankSum=-4.151;VQSLOD=-0.3059;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:81.60:0,82,914	0/0:4,0:4:9.01:0,9,109	0/0:8,0:4:11.90:0,12,122	0/0:9,0:5:12.03:0,12,146	0/0:31,0:32:59.94:0,60,768	1/1:3,16:20:23.67:399,24,0	1/1:4,12:19:24:371,24,0	1/1:15,22:36:63.71:840,64,0	0/0:18,0:18:51.05:0,51,600	0/0:32,0:33:66.93:0,67,748	0/0:23,0:23:56.77:0,57,651	0/0:23,0:23:49.29:0,49,570	0/0:23,0:23:54.07:0,54,625	0/0:14,0:14:39.08:0,39,459	0/0:18,0:18:48:0,48,561	0/0:28,0:28:65.16:0,65,723	0/0:35,0:35:85.49:0,85,987	0/0:29,0:29:75.06:0,75,868	1/1:6,11:20:42.69:595,43,0	1/1:3,21:27:56.14:811,56,0	1/1:1,13:15:15.03:253,15,0	0/0:24,0:24:57.06:0,57,681	0/0:23,0:23:50.58:0,51,570	0/0:29,0:30:76.47:0,76,915	0/0:23,0:23:59.72:0,60,674	0/0:27,0:27:65.95:0,66,750	1/1:10,28:39:39.07:709,39,0	0/0:23,0:23:54.04:0,54,656
chr10	89770643	.	GAA	G	6785.55	PASS	AB=0.704;AC=25;AF=0.446;AN=56;BaseQRankSum=12.056;DP=707;FS=0.000;HRun=12;HaplotypeScore=114.6085;InbreedingCoeff=0.9214;MQ=56.11;MQ0=5;MQRankSum=-3.340;QD=20.02;ReadPosRankSum=5.710;VQSLOD=3.8828;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,37:43:86.92:864,87,0	1/1:5,10:15:27.03:269,27,0	0/0:14,0:7:6.49:0,6,86	0/0:22,0:15:19.71:0,20,201	0/1:11,8:19:8.83:296,0,9	0/0:17,0:17:48.15:0,48,688	0/0:26,0:26:60.19:0,60,863	0/0:26,0:26:66.12:0,66,911	1/1:17,7:24:57.01:547,57,0	0/0:31,0:31:63.02:0,63,841	0/0:22,0:23:68.69:0,69,939	1/1:17,12:29:69.12:681,69,0	1/1:13,7:20:48.02:464,48,0	1/1:18,3:22:47.33:445,47,0	1/1:4,31:36:77.90:775,78,0	0/0:24,0:25:60.20:0,60,869	1/1:5,24:29:66.13:671,66,0	1/1:13,11:23:41.77:422,42,0	0/0:18,0:19:39.06:0,39,498	0/0:28,0:30:71.19:0,71,950	0/0:17,0:18:38.61:0,39,527	1/1:17,14:31:74.40:730,74,0	1/1:15,8:24:33.28:378,33,0	1/1:12,9:22:20.54:243,21,0	0/0:18,0:17:45.88:0,46,623	0/0:39,0:40:99:0,107,1516	0/0:35,0:38:86.11:0,86,1131	0/0:17,0:19:50.64:0,51,680
chr10	89770653	.	A	AC	1918.87	PASS	AB=0.728;AC=9;AF=0.161;AN=56;BaseQRankSum=13.725;DP=716;FS=2.149;HRun=0;HaplotypeScore=129.7903;InbreedingCoeff=-0.1295;MQ=55.09;MQ0=7;MQRankSum=-10.735;QD=8.42;ReadPosRankSum=-0.258;VQSLOD=3.5870;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:88.02:0,88,523	0/0:12,0:12:34.53:0,35,188	0/0:11,0:3:9:0,9,102	0/0:18,0:10:19.04:0,19,200	0/1:23,7:30:80.04:80,0,161	0/0:20,0:20:57.09:0,57,676	0/0:24,0:24:69.18:0,69,869	0/0:27,0:27:78.17:0,78,946	0/1:10,13:23:17.10:401,0,17	0/0:27,0:27:78.01:0,78,905	0/0:27,0:27:81.15:0,81,981	0/1:12,14:26:42.42:407,0,42	0/1:10,10:20:25.59:254,0,26	0/1:9,11:20:4.52:334,0,5	0/0:36,0:36:81.86:0,82,425	0/0:25,0:25:62.75:0,63,821	0/0:26,0:25:68.49:0,68,350	0/1:18,5:22:71.56:137,0,72	0/0:23,0:22:59.29:0,59,632	0/0:30,0:30:87.97:0,88,1008	0/0:15,0:15:45.07:0,45,554	0/1:27,12:39:69.77:340,0,70	0/1:18,9:27:79.25:79,0,104	0/1:15,5:20:28.28:28,0,80	0/0:20,0:18:52.25:0,52,587	0/0:44,0:43:99:0,129,1570	0/0:34,0:34:93.65:0,94,1096	0/0:20,0:20:56.47:0,56,674
chr10	89770661	.	A	AC	3565.50	PASS	AB=0.637;AC=9;AF=0.161;AN=56;BaseQRankSum=14.761;DP=717;FS=7.090;HRun=0;HaplotypeScore=123.9174;InbreedingCoeff=-0.1952;MQ=55.23;MQ0=8;MQRankSum=-9.076;QD=15.50;ReadPosRankSum=4.556;VQSLOD=5.7131;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,103,1348	0/0:12,0:12:36:0,36,433	0/0:13,0:4:7.84:0,8,89	0/0:18,0:10:25.32:0,25,315	0/1:11,7:33:99:392,0,298	0/0:23,0:22:54.17:0,54,739	0/0:24,0:24:69.16:0,69,894	0/0:27,0:27:81.21:0,81,1054	0/1:8,13:25:99:519,0,139	0/0:24,0:24:72.22:0,72,953	0/0:26,0:26:75.23:0,75,1016	0/1:10,14:24:99:503,0,236	0/1:7,13:20:99:339,0,166	0/1:6,11:20:82.91:429,0,83	0/0:40,0:40:99:0,102,1298	0/0:24,0:24:69.22:0,69,949	0/0:27,0:26:78.20:0,78,997	0/1:14,7:20:99:288,0,238	0/0:26,0:25:69.19:0,69,897	0/0:34,0:34:93.28:0,93,1278	0/0:14,0:14:42.13:0,42,571	0/1:20,17:37:99:659,0,292	0/1:11,9:30:99:274,0,315	0/1:10,10:20:99:162,0,231	0/0:20,0:18:54.17:0,54,741	0/0:45,0:44:99:0,132,1737	0/0:29,0:29:86.49:0,86,1159	0/0:14,0:14:42.14:0,42,587
chr10	89770871	.	G	GA	6081.63	PASS	AB=0.722;AC=39;AF=0.696;AN=56;BaseQRankSum=-1.277;DP=634;FS=1.826;HRun=12;HaplotypeScore=83.2289;InbreedingCoeff=0.7147;MQ=69.74;MQ0=1;MQRankSum=-0.540;QD=12.62;ReadPosRankSum=-1.901;VQSLOD=4.5053;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,26:32:46.37:643,46,0	1/1:3,7:10:15.02:146,15,0	0/0:11,0:10:13.59:0,14,77	0/0:17,0:17:8.15:0,8,70	1/1:2,18:21:42.23:366,42,0	1/1:8,0:27:34.97:173,35,0	1/1:5,1:24:39.93:214,40,0	1/1:10,2:33:58.58:365,59,0	1/1:2,17:19:23.71:386,24,0	0/0:21,0:21:35.66:0,36,260	0/0:22,2:24:24.44:0,24,340	1/1:4,22:27:53.92:510,54,0	0/1:8,15:23:26.71:252,0,27	1/1:8,16:24:17.22:328,17,0	1/1:8,21:29:32.65:475,33,0	0/0:22,0:22:47.65:0,48,348	1/1:5,15:20:17.15:328,17,0	1/1:8,9:17:30.11:274,30,0	1/1:7,0:24:30.63:267,31,0	1/1:8,0:23:18.66:175,19,0	1/1:4,0:21:20.44:103,20,0	1/1:4,16:21:16.38:318,16,0	1/1:3,11:16:8.48:227,8,0	0/1:10,14:24:23.66:279,0,24	0/0:15,0:16:11.04:0,11,196	0/0:37,1:39:48.49:0,48,555	1/1:9,0:34:49.12:242,49,0	0/1:12,1:13:9.43:9,0,146
chr10	89771115	.	CT	C	1980.67	PASS	AB=0.886;AC=22;AF=0.393;AN=56;BaseQRankSum=5.270;DP=564;FS=1.848;HRun=13;HaplotypeScore=71.2188;InbreedingCoeff=0.6565;MQ=73.57;MQ0=2;MQRankSum=1.121;QD=7.83;ReadPosRankSum=3.675;VQSLOD=2.8902;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:18:25.72:0,26,137	0/0:2,0:7:17.36:0,17,111	0/1:25,3:21:27.59:28,0,144	0/0:15,0:9:6:0,6,54	1/1:7,15:22:24.73:249,25,0	0/0:25,2:27:13.21:0,13,436	0/1:15,2:18:13.94:14,0,189	0/0:28,1:29:17.09:0,17,315	1/1:1,17:18:41.75:306,42,0	0/0:20,1:23:10.91:0,11,235	0/0:21,0:21:23.42:0,23,373	1/1:2,10:12:20.86:153,21,0	1/1:6,19:27:57.70:401,58,0	1/1:6,11:18:17.31:169,17,0	0/0:8,0:19:26.13:0,26,193	0/0:12,0:12:5.12:0,5,201	0/0:9,0:24:37.64:0,38,235	1/1:2,17:19:35.76:263,36,0	0/1:21,2:23:7.77:8,0,256	0/1:18,5:23:52.14:52,0,347	0/0:9,0:9:21.03:0,21,204	1/1:4,7:11:22.90:159,23,0	1/1:7,17:24:9.51:233,10,0	1/1:3,7:10:20.86:153,21,0	0/0:15,0:17:35.62:0,36,303	0/0:35,0:37:61.34:0,61,635	0/0:33,1:38:26.22:0,26,481	0/0:14,1:15:14.15:0,14,299
chr10	89772343	.	GA	G	1733.63	PASS	AB=0.905;AC=10;AF=0.179;AN=56;BaseQRankSum=9.722;DP=645;FS=5.092;HRun=10;HaplotypeScore=66.0783;InbreedingCoeff=0.7009;MQ=73.54;MQ0=1;MQRankSum=-2.439;QD=12.75;ReadPosRankSum=2.852;VQSLOD=3.5939;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,34:39:86.96:755,87,0	1/1:3,7:10:11.99:104,12,0	0/1:18,2:19:42.71:43,0,169	0/0:15,0:15:22.91:0,23,237	0/0:29,0:29:81.18:0,81,872	0/0:24,3:28:19.90:0,20,651	0/0:20,0:20:57.15:0,57,631	0/0:29,2:31:32.09:0,32,796	0/0:18,0:18:48.11:0,48,513	0/0:18,3:21:6.59:0,7,509	0/0:37,2:39:70.17:0,70,976	0/1:16,2:18:3.99:4,0,409	0/0:21,2:23:8.03:0,8,529	0/0:18,0:18:45.11:0,45,491	1/1:4,22:26:62.98:547,63,0	0/0:18,1:20:27.92:0,28,519	1/1:5,18:23:50.96:443,51,0	0/0:20,0:20:57.15:0,57,628	0/0:24,0:24:60.15:0,60,656	0/0:28,1:29:52.13:0,52,784	0/0:24,2:26:23.07:0,23,695	0/0:21,0:21:60.15:0,60,657	0/0:16,0:16:45.12:0,45,498	0/0:16,0:16:39.11:0,39,431	0/0:18,0:18:54.14:0,54,590	0/0:25,3:29:1.68:0,2,638	0/0:26,2:28:17.09:0,17,645	0/0:20,0:20:51.13:0,51,556
chr10	89773321	.	CCATCA	C	4903.94	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.228;DP=704;FS=2.629;HRun=0;HaplotypeScore=127.4531;InbreedingCoeff=0.9813;MQ=75.93;MQ0=0;MQRankSum=-6.000;QD=46.70;ReadPosRankSum=3.466;VQSLOD=4.7517;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,45:46:99:2264,108,0	1/1:0,4:4:9.03:188,9,0	0/0:30,0:28:72.25:0,72,2029	0/0:19,0:16:38.78:0,39,994	0/0:21,0:21:57.18:0,57,1697	0/0:23,0:23:66.21:0,66,1963	0/0:27,0:27:78.27:0,78,2371	0/0:33,0:32:93.31:0,93,2697	0/0:15,0:15:42.14:0,42,1214	0/0:24,0:24:66.22:0,66,1942	0/0:16,0:16:48.16:0,48,1443	0/0:29,0:29:84.27:0,84,2488	0/0:25,0:25:72.25:0,72,2168	0/0:31,0:31:87.30:0,87,2696	1/1:1,22:23:54.19:1132,54,0	0/0:28,0:28:81.26:0,81,2330	1/1:2,30:32:63.22:1321,63,0	0/0:20,0:20:54.19:0,54,1581	0/0:16,0:16:48.11:0,48,1260	0/0:23,0:23:69.24:0,69,2119	0/0:62,0:62:99:0,163,4884	0/0:25,0:25:69.24:0,69,2047	0/0:16,0:16:45.15:0,45,1367	0/0:36,0:36:99:0,108,3298	0/0:28,0:28:84.29:0,84,2603	0/0:25,0:25:75.25:0,75,2166	0/0:21,0:21:60.21:0,60,1794	0/0:6,0:6:18.06:0,18,522
chr10	89774367	.	GACACACACACACACAC	G	4161.98	PASS	AB=0.611;AC=13;AF=0.241;AN=54;BaseQRankSum=6.458;DP=500;FS=35.345;HRun=0;HaplotypeScore=204.2362;InbreedingCoeff=0.8391;MQ=65.79;MQ0=5;MQRankSum=-7.892;QD=35.88;ReadPosRankSum=0.972;VQSLOD=1.5706;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:20:12.04:0,12,241	0/0:1,0:8:24.08:0,24,552	0/0:26,0:19:12.04:0,12,517	0/0:22,0:14:15.05:0,15,611	0/0:27,0:27:63.22:0,63,4147	1/1:9,12:21:30.10:1323,30,0	1/1:9,1:12:15.05:492,15,0	./.	0/0:13,0:15:27.09:0,27,1968	0/0:14,0:16:39.13:0,39,2157	0/0:16,0:16:30.10:0,30,1949	0/0:10,0:16:48.16:0,48,2892	0/0:11,0:13:30.10:0,30,1973	0/0:11,0:12:18.05:0,18,820	0/1:8,0:22:1.35:1,0,506	0/0:17,0:16:39.13:0,39,2474	0/0:18,0:26:29.17:0,29,581	0/0:13,0:18:27.09:0,27,1574	1/1:10,0:11:3.01:112,3,0	1/1:5,11:16:18.06:794,18,0	1/1:7,6:13:1.55:4,2,0	0/0:17,0:17:27.09:0,27,1666	0/0:15,0:17:33.11:0,33,2295	0/0:19,0:20:33.11:0,33,1789	0/0:23,0:23:51.18:0,51,3111	0/0:21,0:23:51.18:0,51,3072	1/1:6,14:21:33.11:1436,33,0	0/0:9,0:13:36.12:0,36,2467
chr10	89775042	.	G	GA	6168.52	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-12.132;DP=796;FS=8.749;HRun=6;HaplotypeScore=76.1796;InbreedingCoeff=0.9999;MQ=89.87;MQ0=0;MQRankSum=-4.955;QD=32.13;ReadPosRankSum=-1.631;VQSLOD=4.3415;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,1213	0/0:13,0:13:33.07:0,33,337	0/0:31,0:31:77.37:0,77,762	0/0:31,0:31:77.86:0,78,771	0/0:31,0:31:81.14:0,81,815	1/1:1,21:22:57.12:697,57,0	1/1:4,30:34:75.24:944,75,0	1/1:2,25:27:75.20:905,75,0	0/0:18,0:18:51.11:0,51,520	0/0:40,0:40:99:0,111,1128	0/0:20,0:20:43.15:0,43,506	0/0:40,0:40:99:0,114,1155	0/0:32,0:32:87.14:0,87,870	0/0:22,0:22:60.13:0,60,607	0/0:37,0:37:99:0,105,1069	0/0:35,0:35:99:0,99,996	0/0:42,0:42:99:0,111,1132	0/0:23,0:23:66.15:0,66,673	1/1:3,17:20:54.15:660,54,0	1/1:3,21:24:60.16:738,60,0	1/1:3,37:40:99:1321,105,0	0/0:20,0:20:51.11:0,51,520	0/0:24,0:24:69.15:0,69,703	0/0:31,0:31:87.20:0,87,888	0/0:21,0:21:60.14:0,60,612	0/0:36,0:36:99:0,105,1056	1/1:1,24:25:72.23:905,72,0	0/0:13,0:13:39.09:0,39,398
chr10	89775541	.	TTC	T	868.78	PASS	AB=0.978;AC=25;AF=0.446;AN=56;BaseQRankSum=2.668;DP=372;FS=9.018;HRun=0;HaplotypeScore=54.5196;InbreedingCoeff=-0.5512;MQ=44.82;MQ0=33;MQRankSum=-0.642;QD=2.67;ReadPosRankSum=2.336;VQSLOD=0.4519;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,2:21:35.44:137,0,35	0/1:7,0:7:39.19:39,0,39	0/0:12,0:3:1.80:0,2,5	0/1:15,0:5:15.40:18,0,15	0/1:18,1:18:48.99:49,0,72	0/1:6,0:5:2.17:2,0,18	0/1:17,0:14:34.92:40,0,35	0/1:21,1:22:68.85:92,0,69	0/0:8,0:8:3.47:0,3,113	0/0:7,0:6:5.90:0,6,120	0/0:17,0:14:8.82:0,9,93	1/1:12,0:12:9.34:115,9,0	0/1:11,0:10:27.50:27,0,39	0/1:13,0:12:15.78:26,0,16	0/1:11,0:11:5.88:6,0,39	0/1:15,1:14:15.62:16,0,107	0/1:10,0:6:8.14:8,0,37	0/1:23,1:17:93.35:93,0,93	0/1:19,1:20:73.41:139,0,73	0/1:19,0:18:39.84:40,0,149	0/1:9,0:8:10.62:11,0,57	0/0:3,0:3:5.25:0,5,23	0/1:16,0:15:14.78:15,0,153	1/1:5,0:3:1.03:6,1,0	0/1:13,0:12:38.75:39,0,78	0/1:13,0:13:2.91:3,0,103	0/1:10,2:12:73.73:74,0,75	0/1:8,0:6:20.44:20,0,55
chr10	89777251	.	TCACACACACACACACACACACACACA	T	1708.40	PASS	AB=0.733;AC=17;AF=0.315;AN=54;BaseQRankSum=3.917;DP=299;FS=13.164;HRun=0;HaplotypeScore=175.0080;InbreedingCoeff=0.5390;MQ=75.76;MQ0=11;MQRankSum=-2.570;QD=19.87;ReadPosRankSum=0.356;VQSLOD=2.0543;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:21.04:0,21,1208	0/0:3,0:5:12.04:0,12,702	0/0:25,0:14:0.89:0,1,2	0/0:27,0:13:3.48:0,3,125	1/1:9,1:9:3.01:202,3,0	0/0:12,0:17:24.08:0,24,790	0/0:14,0:12:15.05:0,15,542	0/0:15,0:14:2.98:0,3,21	1/1:6,4:10:6.01:403,6,0	0/0:6,0:5:6.02:0,6,445	0/0:6,0:6:12.04:0,12,942	1/1:3,3:6:3.01:198,3,0	1/1:7,1:8:6.02:392,6,0	1/1:6,0:6:2.99:26,3,0	0/0:3,0:5:9.03:0,9,649	0/0:8,0:8:18.06:0,18,1663	0/0:16,0:19:21.03:0,21,792	1/1:13,0:12:2.96:20,3,0	0/0:5,0:5:12.04:0,12,524	0/0:1,0:1:3.01:0,3,66	0/0:10,0:11:9.03:0,9,410	1/1:10,0:10:3:28,3,0	0/1:7,4:11:8.96:393,0,9	1/1:10,2:12:3.01:202,3,0	./.	0/0:10,0:9:13.29:0,13,1327	0/0:5,0:8:12.04:0,12,470	0/0:4,0:4:12.04:0,12,1339
chr10	89777597	.	GATTTATTT	G	796.98	PASS	AB=0.625;AC=13;AF=0.342;AN=38;BaseQRankSum=2.621;DP=221;FS=15.532;HRun=0;HaplotypeScore=54.9451;InbreedingCoeff=0.5503;MQ=67.53;MQ0=4;MQRankSum=-3.793;QD=8.13;ReadPosRankSum=-2.917;VQSLOD=-0.4410;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:4:2.84:14,3,0	./.	./.	./.	0/0:5,0:5:9.03:0,9,120	0/1:8,12:19:67.36:270,0,67	./.	1/1:16,5:21:15.02:268,15,0	./.	0/0:5,0:5:9.03:0,9,371	0/0:6,0:6:9.03:0,9,361	0/0:9,0:8:12.04:0,12,300	0/0:4,0:4:9.03:0,9,315	0/0:2,0:2:3.01:0,3,105	./.	0/0:4,0:5:6.02:0,6,194	1/1:9,0:22:3.01:56,3,0	0/0:12,0:11:15.05:0,15,429	1/1:15,4:18:5.99:97,6,0	1/1:1,1:2:2.97:20,3,0	./.	./.	0/0:1,0:1:3.01:0,3,105	./.	0/0:12,0:12:21.07:0,21,733	0/0:4,0:4:9.03:0,9,371	1/1:4,4:8:9.03:209,9,0	0/0:24,0:21:54.19:0,54,2224
chr10	89777631	.	TTTA	T	403.67	PASS	AB=1.000;AC=12;AF=0.250;AN=48;BaseQRankSum=1.988;DP=292;FS=3.214;HRun=0;HaplotypeScore=33.6933;InbreedingCoeff=0.1282;MQ=33.06;MQ0=91;MQRankSum=-3.472;QD=4.69;ReadPosRankSum=-0.059;VQSLOD=1.1307;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:5:6.02:0,6,68	./.	./.	./.	1/1:1,8:8:6.02:102,6,0	0/1:22,0:16:19.27:19,0,86	0/0:7,0:2:6.02:0,6,68	0/0:25,0:15:36.53:0,37,379	1/1:6,0:3:9.03:116,9,0	0/0:12,0:7:21.06:0,21,339	0/0:7,0:6:15.05:0,15,270	0/0:10,0:6:6.01:0,6,60	0/1:7,0:4:28.46:28,0,78	0/1:7,0:3:21.12:66,0,21	0/0:9,0:5:3.01:0,3,34	0/0:8,0:4:9.50:0,10,135	0/0:31,0:19:8.38:0,8,181	0/1:23,0:15:99:137,0,113	0/0:14,0:10:14.97:0,15,259	0/0:7,0:4:9.02:0,9,102	0/0:13,0:3:3.01:0,3,34	1/1:1,0:1:3.01:35,3,0	0/1:2,0:2:24.15:29,0,24	./.	0/0:13,0:10:30.10:0,30,576	0/0:8,0:6:18.06:0,18,306	0/1:9,0:6:13.21:13,0,29	0/0:24,0:20:60.20:0,60,1282
chr10	89777634	.	A	AT	722.03	PASS	AB=0.641;AC=15;AF=0.313;AN=48;BaseQRankSum=-2.288;DP=325;FS=9.412;HRun=4;HaplotypeScore=28.9449;InbreedingCoeff=0.6349;MQ=32.07;MQ0=108;MQRankSum=1.064;QD=9.76;ReadPosRankSum=0.564;VQSLOD=-0.1437;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:5:6.02:0,6,68	./.	./.	./.	1/1:9,0:8:3.11:8,3,0	0/0:22,0:16:17.73:0,18,147	0/0:8,0:2:6.02:0,6,68	0/0:25,0:15:42.11:0,42,457	1/1:3,4:4:9.03:114,9,0	0/0:15,0:9:24.07:0,24,270	0/0:9,0:6:12.03:0,12,136	1/1:4,5:5:6.02:82,6,0	1/1:3,5:5:12.04:163,12,0	1/1:5,4:4:9.03:115,9,0	0/0:9,0:5:3.01:0,3,34	0/0:8,0:4:1.59:0,2,31	0/0:34,0:19:20.95:0,21,209	0/1:11,14:15:5.68:285,0,6	0/0:16,0:12:26.97:0,27,287	0/0:8,0:5:9.03:0,9,102	0/0:14,0:4:3.01:0,3,34	1/1:3,1:3:3.01:34,3,0	1/1:1,2:2:6.02:75,6,0	./.	0/0:14,0:11:30.06:0,30,338	0/0:12,0:8:18.05:0,18,204	0/0:11,0:7:14.83:0,15,130	0/0:24,0:20:60.17:0,60,679
chr10	89778480	.	GCTGGGAACACAGACTGCT	G	19024.71	PASS	AC=38;AF=0.704;AN=54;BaseQRankSum=11.291;DP=388;FS=1.532;HRun=0;HaplotypeScore=193.5911;InbreedingCoeff=0.9217;MQ=91.26;MQ0=0;MQRankSum=-12.751;QD=76.10;ReadPosRankSum=5.563;VQSLOD=4.0943;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,25:38:60.16:2706,60,0	1/1:0,4:4:12.04:624,12,0	0/0:17,0:17:45.13:0,45,1608	0/0:23,0:23:49.22:0,49,1979	1/1:3,4:7:6.02:312,6,0	1/1:6,11:17:24.08:1247,24,0	1/1:3,10:13:21.07:1092,21,0	1/1:4,7:11:21.04:721,21,0	1/1:1,9:10:24.08:1220,24,0	0/0:15,0:15:36.12:0,36,2991	0/0:6,0:6:15.05:0,15,1108	1/1:3,13:16:30.10:1559,30,0	1/1:7,8:15:18.06:935,18,0	1/1:2,6:9:15.05:779,15,0	1/1:1,8:9:21.07:1091,21,0	0/0:13,0:13:39.13:0,39,3393	1/1:3,6:9:15.01:644,15,0	1/1:2,14:16:33.11:1621,33,0	1/1:4,6:10:18.03:697,18,0	1/1:4,6:10:15.05:661,15,0	1/1:4,9:13:3.01:156,3,0	./.	1/1:2,5:7:9.03:468,9,0	1/1:6,12:18:17.34:934,17,0	0/0:19,0:19:48.16:0,48,3596	0/0:20,0:20:57.20:0,57,4418	1/1:7,11:18:30.10:1559,30,0	0/0:24,0:24:69.18:0,69,4866
chr10	89778968	.	G	GGA	7393.03	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=0.664;DP=561;FS=13.378;HRun=0;HaplotypeScore=91.9360;InbreedingCoeff=0.9909;MQ=74.32;MQ0=0;MQRankSum=-3.238;QD=18.81;ReadPosRankSum=5.870;VQSLOD=4.2166;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:41:60.38:289,60,0	1/1:0,0:8:15.35:59,15,0	0/0:19,0:17:29.97:0,30,420	0/0:14,0:14:36.53:0,37,334	1/1:0,0:15:24.40:128,24,0	1/1:1,16:17:42.13:711,42,0	1/1:0,19:19:45.09:729,45,0	1/1:2,19:23:62.94:787,63,0	1/1:2,0:25:48.62:188,49,0	0/0:18,0:18:47.75:0,48,527	0/0:8,0:8:15.03:0,15,185	1/1:0,0:36:69.88:275,70,0	1/1:0,0:21:46.59:181,47,0	1/1:0,0:15:33.43:129,33,0	1/1:0,0:22:46.73:185,47,0	0/0:19,0:19:56.97:0,57,657	1/1:0,0:28:59.71:235,60,0	1/1:0,0:16:36.35:143,36,0	1/1:3,13:18:46.71:604,47,0	1/1:0,11:12:30.05:465,30,0	1/1:1,36:37:84.29:1411,84,0	1/1:0,0:23:41.91:164,42,0	0/0:23,0:23:12.77:0,13,231	0/0:26,0:26:67.42:0,67,328	0/0:13,0:13:34.96:0,35,370	0/0:18,0:18:41.73:0,42,456	1/1:1,16:17:42.13:710,42,0	0/0:10,0:10:30.03:0,30,329
chr10	89779185	.	GCA	G	4805.95	PASS	AB=0.817;AC=18;AF=0.321;AN=56;BaseQRankSum=12.312;DP=721;FS=1.965;HRun=0;HaplotypeScore=89.6413;InbreedingCoeff=0.3679;MQ=73.71;MQ0=2;MQRankSum=-0.431;QD=16.92;ReadPosRankSum=0.016;VQSLOD=4.4819;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,1:38:44.87:0,45,1215	0/1:9,1:10:9.30:9,0,360	0/0:49,0:36:45.14:0,45,659	0/0:44,0:34:60.99:0,61,958	0/0:22,0:22:63.21:0,63,995	0/1:2,14:17:6.46:409,0,6	0/1:8,18:26:9.73:528,0,10	1/1:11,20:32:65.95:741,66,0	0/0:31,2:33:14.47:0,14,1204	0/1:16,2:18:27.61:28,0,581	0/0:14,1:15:8.75:0,9,640	0/0:28,1:29:41.84:0,42,1146	0/0:26,0:26:30.43:0,30,799	0/0:27,0:27:63.21:0,63,1016	0/0:36,1:37:56.91:0,57,1412	0/0:20,0:20:11.93:0,12,690	0/0:19,0:19:48.16:0,48,768	0/0:23,0:23:66.21:0,66,1031	1/1:4,6:10:18.04:206,18,0	1/1:4,21:26:66.03:772,66,0	1/1:9,48:57:86.99:1553,87,0	0/1:13,2:15:42.58:43,0,357	0/0:19,2:21:11.79:0,12,689	0/1:23,3:26:49.02:49,0,760	0/1:19,2:21:21.66:22,0,645	0/0:33,1:34:44.86:0,45,1201	1/1:2,13:15:36.11:437,36,0	0/1:10,1:11:9.31:9,0,360
chr10	89779773	.	C	CAAAA	6552.28	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=0.058;DP=490;FS=13.373;HRun=16;HaplotypeScore=138.7957;InbreedingCoeff=0.2707;MQ=60.51;MQ0=13;MQRankSum=-0.914;QD=14.31;ReadPosRankSum=-0.966;VQSLOD=0.9846;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:15:29.85:242,30,0	1/1:7,0:7:11.85:114,12,0	0/0:31,0:12:7.94:0,8,66	0/1:23,0:10:4.92:5,0,25	1/1:30,0:31:61.32:750,61,0	1/1:8,0:8:9.73:72,10,0	0/1:7,0:7:2.18:15,0,2	1/1:20,0:20:4.32:81,4,0	1/1:9,1:14:14.62:325,15,0	1/1:17,0:17:30.07:413,30,0	1/1:7,0:20:27.80:283,28,0	1/1:18,1:21:42.11:589,42,0	1/1:12,0:13:23.80:258,24,0	1/1:10,0:9:12.04:159,12,0	1/1:11,0:11:13.32:122,13,0	1/1:26,0:25:14.94:544,15,0	0/1:22,0:21:23.82:83,0,24	1/1:18,0:18:33.32:498,33,0	1/1:17,0:15:14.73:67,15,0	1/1:19,0:18:25.49:135,25,0	1/1:7,0:6:5.20:28,5,0	1/1:5,0:6:2.74:12,3,0	1/1:21,0:23:56.15:686,56,0	1/1:10,0:10:9.03:151,9,0	1/1:5,1:22:11.82:130,12,0	1/1:10,8:25:47.37:461,47,0	1/1:25,0:26:46.79:294,47,0	1/1:3,0:14:3.01:36,3,0
chr10	89779784	.	A	AAAAG	5770.71	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=-1.154;DP=534;FS=8.471;HRun=0;HaplotypeScore=112.5400;InbreedingCoeff=0.4451;MQ=53.14;MQ0=28;MQRankSum=-0.638;QD=14.76;ReadPosRankSum=3.000;VQSLOD=4.0153;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:17:11.10:0,11,177	0/0:5,0:5:0.08:0,0,21	0/0:47,0:12:20.32:0,20,171	0/0:39,0:8:10.06:0,10,55	1/1:21,8:30:55.57:808,56,0	1/1:9,0:10:9.57:122,10,0	1/1:3,0:8:20.49:156,20,0	1/1:14,0:24:29.87:307,30,0	1/1:15,0:15:25.27:336,25,0	0/1:13,0:13:23.61:24,0,121	0/1:21,0:21:51.04:51,0,117	1/1:17,3:21:46.56:579,47,0	1/1:9,2:12:25.87:269,26,0	1/1:11,1:11:19.37:215,19,0	0/0:9,0:9:24.29:0,24,174	0/1:24,0:24:99:103,0,141	0/0:21,0:20:37.45:0,37,262	1/1:10,8:17:24.02:650,24,0	1/1:10,0:13:31.72:192,32,0	1/1:18,0:23:36.38:312,36,0	1/1:1,0:2:5.94:44,6,0	1/1:8,0:8:12.83:146,13,0	1/1:15,8:25:65.53:898,66,0	1/1:10,2:12:17.97:249,18,0	0/1:27,0:27:29:29,0,142	0/1:24,0:24:43.01:43,0,154	1/1:19,0:26:10.99:233,11,0	0/1:14,0:14:3.08:3,0,21
chr10	89779796	.	AG	A	1022.95	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=5.812;DP=532;FS=0.418;HRun=1;HaplotypeScore=97.6523;InbreedingCoeff=0.5129;MQ=41.93;MQ0=29;MQRankSum=-2.904;QD=3.25;ReadPosRankSum=0.762;VQSLOD=-0.0879;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:15:19.43:115,19,0	1/1:4,1:5:13.52:79,14,0	0/0:43,1:6:8.72:0,9,66	0/1:44,0:6:10.17:10,0,26	1/1:32,0:31:41.73:190,42,0	0/0:10,0:10:19.61:0,20,91	0/0:10,0:10:15.68:0,16,124	0/0:25,0:24:11.22:0,11,275	1/1:10,0:10:18.84:77,19,0	0/0:19,0:19:35.18:0,35,461	0/1:19,0:19:6.51:7,0,296	1/1:21,0:21:0.45:92,0,0	1/1:10,1:11:17.06:82,17,0	1/1:14,0:13:3.10:24,3,0	0/1:11,0:11:5.11:44,0,5	0/1:22,0:22:36.93:37,0,414	0/1:21,0:20:0.17:106,0,0	1/1:18,2:19:20.55:144,21,0	0/1:17,0:13:2.18:2,0,103	0/0:21,0:19:21.13:0,21,174	0/1:5,0:4:3.38:3,0,39	1/1:7,0:7:7.13:26,7,0	1/1:25,0:24:22.75:132,23,0	1/1:11,0:11:9.75:47,10,0	0/0:26,0:26:28.68:0,29,347	0/0:24,0:24:12.56:0,13,431	0/0:22,0:22:24.74:0,25,199	0/0:16,0:15:12.04:0,12,142
chr10	89779797	.	GA	G	2573.38	PASS	AB=0.759;AC=25;AF=0.446;AN=56;BaseQRankSum=-0.194;DP=539;FS=2.591;HRun=10;HaplotypeScore=96.5427;InbreedingCoeff=0.8053;MQ=41.83;MQ0=30;MQRankSum=-3.135;QD=12.20;ReadPosRankSum=1.949;VQSLOD=3.6226;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:15,7:16:25.17:127,0,25	1/1:4,2:6:10.70:78,11,0	0/0:44,0:6:6.02:0,6,66	0/0:45,0:6:3:0,3,28	1/1:9,23:31:46.09:478,46,0	0/0:0,0:10:19.89:0,20,99	0/0:4,0:10:19.39:0,19,98	0/0:12,0:24:42.25:0,42,234	1/1:5,5:10:17.26:144,17,0	0/0:16,3:19:1.11:0,1,441	0/0:20,0:20:16.95:0,17,359	1/1:6,15:21:32.98:283,33,0	1/1:4,7:11:7.91:160,8,0	1/1:2,12:13:15.45:174,15,0	1/1:3,8:11:23.73:207,24,0	0/0:21,0:22:50.06:0,50,514	1/1:12,9:20:5.64:186,6,0	1/1:8,12:19:26.04:229,26,0	0/0:11,0:13:28.51:0,29,148	0/0:7,0:20:44.32:0,44,251	0/0:4,0:4:11.49:0,11,79	1/1:2,5:7:15:130,15,0	1/1:6,19:24:53.96:462,54,0	1/1:6,5:11:14.50:129,15,0	0/0:25,0:25:20.57:0,21,360	0/0:24,0:24:19.02:0,19,472	0/0:8,0:23:59.53:0,60,301	0/0:16,0:15:12.03:0,12,133
chr10	89779813	.	GA	G	657.83	PASS	AB=0.607;AC=6;AF=0.107;AN=56;BaseQRankSum=0.398;DP=516;FS=0.000;HRun=9;HaplotypeScore=89.7943;InbreedingCoeff=0.5654;MQ=49.97;MQ0=24;MQRankSum=-2.521;QD=10.96;ReadPosRankSum=0.785;VQSLOD=2.8217;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,11:17:31.16:314,31,0	0/1:2,3:5:10.42:71,0,10	0/0:48,0:9:19.72:0,20,178	0/0:44,0:6:5.95:0,6,52	0/0:33,0:33:83.76:0,84,905	0/0:11,0:11:24.07:0,24,277	0/0:8,0:8:18.01:0,18,193	0/0:25,0:24:66.19:0,66,752	0/0:10,0:10:24:0,24,256	0/0:20,0:20:52.30:0,52,548	0/0:18,0:18:50.87:0,51,550	0/0:19,0:19:28.63:0,29,310	0/0:14,0:14:33.28:0,33,318	0/0:15,0:14:27.08:0,27,312	1/1:2,12:14:26.60:245,27,0	0/0:21,0:21:47.32:0,47,505	0/1:6,14:19:24.34:164,0,24	0/0:14,0:14:27.03:0,27,287	0/0:14,1:13:8.64:0,9,353	0/0:18,1:18:17.70:0,18,452	0/0:6,0:5:12.03:0,12,130	0/0:5,0:5:15.04:0,15,173	0/0:22,0:22:56.72:0,57,603	0/0:6,0:6:12.04:0,12,138	0/0:25,1:26:9.44:0,9,381	0/0:23,0:23:43.01:0,43,485	0/0:22,1:23:26.16:0,26,526	0/0:11,0:10:15.04:0,15,173
chr10	89780698	.	TCCCC	T	11701.60	PASS	AB=0.605;AC=37;AF=0.661;AN=56;BaseQRankSum=-2.080;DP=624;FS=5.214;HRun=12;HaplotypeScore=141.6651;InbreedingCoeff=0.7797;MQ=63.78;MQ0=5;MQRankSum=-1.309;QD=23.26;ReadPosRankSum=4.956;VQSLOD=2.6733;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:27:54.13:817,54,0	1/1:0,13:13:39.13:590,39,0	0/0:15,0:14:27.09:0,27,508	0/0:16,0:14:33.11:0,33,622	1/1:1,24:25:51.08:714,51,0	0/1:7,0:20:17.59:18,0,30	0/1:9,0:34:11.34:37,0,11	0/1:11,0:26:0.31:28,0,0	1/1:2,17:19:48.14:726,48,0	0/0:2,0:13:26.53:0,27,166	0/0:3,0:12:24.28:0,24,151	1/1:4,23:27:63.18:953,63,0	1/1:4,21:25:57.65:863,58,0	1/1:3,20:23:48.14:726,48,0	1/1:5,30:35:81.23:1226,81,0	0/0:2,0:26:65.17:0,65,397	1/1:4,38:40:96.27:1453,96,0	1/1:2,19:21:57.17:863,57,0	1/1:2,0:11:11.20:30,11,0	1/1:1,0:29:20.71:93,21,0	1/1:6,0:21:16.71:43,17,0	1/1:3,22:24:54.11:792,54,0	1/1:1,21:22:51.16:772,51,0	1/1:1,22:23:57.19:863,57,0	0/0:6,0:9:20.74:0,21,166	0/0:7,0:25:50.87:0,51,358	1/1:1,0:33:36.42:96,36,0	0/0:1,0:5:6.82:0,7,48
chr10	89781419	.	G	GA	3443.80	PASS	AB=0.692;AC=11;AF=0.196;AN=56;BaseQRankSum=-8.171;DP=656;FS=0.790;HRun=10;HaplotypeScore=74.9440;InbreedingCoeff=0.8803;MQ=75.92;MQ0=0;MQRankSum=0.925;QD=22.66;ReadPosRankSum=-1.769;VQSLOD=3.7796;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:74.21:0,74,610	0/0:7,0:7:20.97:0,21,172	0/0:31,0:26:14.02:0,14,188	0/0:22,0:19:8.33:0,8,129	0/0:29,0:30:76.15:0,76,604	0/0:34,0:35:88.43:0,88,729	0/0:18,0:18:47.91:0,48,391	0/0:20,0:23:43.43:0,43,327	0/0:25,0:25:71.91:0,72,591	1/1:6,24:30:35.53:741,36,0	1/1:4,24:28:60.09:625,60,0	0/0:27,0:27:66.90:0,67,513	0/0:20,0:20:41.94:0,42,345	0/0:11,0:11:26.95:0,27,222	0/0:26,2:28:42.92:0,43,559	1/1:6,20:28:53.80:540,54,0	0/0:27,0:28:61.91:0,62,494	0/0:21,0:21:50.89:0,51,413	0/0:22,0:22:50.90:0,51,416	0/0:23,0:23:44.14:0,44,474	0/0:17,0:18:37.95:0,38,297	0/0:17,0:17:44.94:0,45,369	0/0:16,0:16:43.97:0,44,348	0/0:22,0:22:62.88:0,63,510	1/1:2,27:29:63.16:671,63,0	1/1:3,25:28:72.16:753,72,0	0/0:27,0:26:68.90:0,69,566	0/1:5,4:9:9.61:113,0,10
chr10	89781769	.	T	TGCGC	5966.79	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=4.660;DP=491;FS=2.405;HRun=0;HaplotypeScore=126.5047;InbreedingCoeff=0.3467;MQ=53.62;MQ0=3;MQRankSum=-5.943;QD=21.46;ReadPosRankSum=-1.008;VQSLOD=4.6291;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:62.84:0,63,517	0/0:7,0:7:11.50:0,12,60	0/0:9,0:1:2.74:0,3,12	0/0:9,0:1:1.25:0,1,3	0/1:27,0:27:57.76:373,0,58	0/0:20,0:20:48.16:0,48,815	0/0:14,0:14:42.14:0,42,690	0/0:22,0:22:33.10:0,33,506	1/1:13,0:13:14.96:130,15,0	1/1:18,2:20:42.14:804,42,0	1/1:19,1:20:41:652,41,0	0/1:18,0:18:63.47:157,0,63	0/1:14,0:14:61.36:61,0,161	0/1:20,0:20:69.22:279,0,69	0/0:18,0:18:31.85:0,32,201	1/1:11,0:11:24.08:475,24,0	0/0:26,0:26:47.89:0,48,355	0/1:18,0:18:12.31:177,0,12	0/0:16,0:16:36.11:0,36,584	0/0:20,0:20:60.20:0,60,1018	0/0:4,0:4:6.02:0,6,101	0/1:15,0:15:99:150,0,162	0/1:20,0:19:57.62:166,0,58	0/1:15,0:15:23.58:146,0,24	1/1:29,2:31:54.16:1001,54,0	1/1:28,1:28:63.13:1083,63,0	0/0:21,0:21:51.17:0,51,871	1/1:7,0:7:20.08:311,20,0
chr10	89781776	.	G	GCACA	7952.12	PASS	AB=0.739;AC=34;AF=0.607;AN=56;BaseQRankSum=11.610;DP=503;FS=7.834;HRun=0;HaplotypeScore=119.6322;InbreedingCoeff=0.5467;MQ=54.81;MQ0=6;MQRankSum=-4.132;QD=21.09;ReadPosRankSum=4.046;VQSLOD=4.1961;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:29:41.29:324,0,41	1/1:0,0:9:14.99:130,15,0	0/0:16,0:1:2.97:0,3,20	0/1:21,0:7:4.20:4,0,4	0/1:6,21:32:11.76:982,0,12	0/0:19,0:19:51.17:0,51,973	0/0:14,0:14:42.14:0,42,745	0/0:18,0:18:39.05:0,39,588	1/1:2,7:10:15.05:363,15,0	1/1:17,0:17:32.05:301,32,0	1/1:18,0:18:28.97:268,29,0	1/1:4,16:21:24.41:545,24,0	1/1:12,0:14:25.53:369,26,0	1/1:5,9:16:36.50:871,37,0	0/1:3,0:17:3.01:212,0,3	1/1:8,0:8:20.99:204,21,0	0/1:7,0:28:20.19:284,0,20	1/1:1,15:21:36.10:743,36,0	0/0:13,0:13:39.06:0,39,681	0/0:21,0:21:63.22:0,63,1172	0/0:5,0:5:9.03:0,9,151	1/1:14,0:16:21.73:409,22,0	1/1:16,0:17:35.70:599,36,0	1/1:12,2:14:15.52:339,16,0	1/1:32,0:32:7.17:421,7,0	1/1:28,0:27:2.05:470,2,0	0/0:20,0:20:57.18:0,57,1029	0/1:8,0:8:4.46:114,0,4
chr10	89781778	.	G	GCGCGCACA	10472.50	PASS	AB=0.962;AC=28;AF=0.500;AN=56;BaseQRankSum=3.122;DP=508;FS=11.094;HRun=0;HaplotypeScore=148.1692;InbreedingCoeff=0.2378;MQ=54.13;MQ0=7;MQRankSum=-1.415;QD=29.17;ReadPosRankSum=3.909;VQSLOD=4.0328;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:29:58.28:58,0,289	1/1:9,0:9:10.28:60,10,0	0/0:18,0:1:2.97:0,3,20	0/0:22,0:7:8.96:0,9,74	0/1:30,0:30:53.20:242,0,53	0/0:16,0:19:51.17:0,51,1374	0/0:14,0:14:42.14:0,42,960	0/0:16,0:16:39.12:0,39,726	1/1:8,0:8:14.85:102,15,0	1/1:10,8:18:48.16:1688,48,0	1/1:11,8:20:44.98:1453,45,0	0/1:22,0:22:46.36:144,0,46	0/1:14,0:14:93.25:93,0,139	0/1:18,0:18:49.99:194,0,50	0/1:16,0:16:25.82:26,0,45	1/1:2,6:9:24.08:916,24,0	0/1:29,0:29:40.91:41,0,173	1/1:19,0:19:35.47:239,35,0	0/0:13,0:14:39.13:0,39,942	0/0:21,0:22:63.21:0,63,1586	0/0:3,0:3:9.03:0,9,173	0/1:8,0:17:71.37:71,0,135	0/1:20,0:19:18.44:149,0,18	0/1:13,0:13:26.55:83,0,27	1/1:22,10:33:66.19:2012,66,0	1/1:16,11:26:78.21:2315,78,0	0/0:20,0:20:57.19:0,57,1436	1/1:3,4:8:21.05:585,21,0
chr10	89781798	.	C	CA	1001.50	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=1.186;DP=567;FS=0.614;HRun=7;HaplotypeScore=128.9658;InbreedingCoeff=0.8231;MQ=56.03;MQ0=19;MQRankSum=-5.419;QD=10.89;ReadPosRankSum=-2.215;VQSLOD=1.3823;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:63.25:0,63,676	0/0:9,0:9:17.95:0,18,155	0/1:46,0:8:8.12:8,0,95	0/0:42,0:14:29.13:0,29,224	0/0:32,0:33:74.38:0,74,694	0/0:20,1:20:39.06:0,39,377	0/0:11,0:11:27.04:0,27,261	0/0:17,0:17:42.05:0,42,401	0/0:8,0:8:14.94:0,15,126	0/0:19,0:19:36.93:0,37,343	0/0:20,0:20:45.45:0,45,423	0/0:24,0:24:48.02:0,48,436	1/1:1,7:11:27.08:319,27,0	0/0:16,0:16:47.98:0,48,421	0/0:18,0:18:48.06:0,48,455	0/0:9,0:9:25.28:0,25,233	0/0:29,0:29:69.05:0,69,648	0/0:24,0:24:56.95:0,57,507	0/0:24,0:22:63.06:0,63,592	0/0:20,0:20:57.09:0,57,548	0/0:5,0:5:8.88:0,9,73	0/0:14,0:14:28.42:0,28,241	1/1:7,10:23:57:619,57,0	1/1:3,6:11:17.96:200,18,0	0/0:29,0:29:68.36:0,68,609	0/0:24,0:22:46.95:0,47,459	0/0:18,0:18:54.08:0,54,519	0/0:9,0:9:14.07:0,14,166
chr10	89781854	.	CA	C	2140.02	PASS	AB=0.950;AC=13;AF=0.232;AN=56;BaseQRankSum=6.976;DP=535;FS=0.000;HRun=8;HaplotypeScore=71.4784;InbreedingCoeff=0.8936;MQ=65.52;MQ0=3;MQRankSum=0.429;QD=16.09;ReadPosRankSum=2.335;VQSLOD=3.6722;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:65.95:0,66,735	0/0:7,0:7:15.05:0,15,181	0/0:25,0:20:50.78:0,51,516	0/1:18,0:15:17.89:18,0,172	0/0:22,0:22:48.08:0,48,560	0/0:16,0:16:36.09:0,36,422	0/0:12,0:12:30.08:0,30,351	0/0:40,0:40:99:0,105,1224	0/0:9,0:9:15.05:0,15,181	1/1:1,16:17:45.06:429,45,0	1/1:1,16:17:39.06:377,39,0	0/0:22,0:22:51.16:0,51,615	0/0:12,0:12:26.95:0,27,311	0/0:13,0:13:36.11:0,36,433	0/0:19,0:19:48.10:0,48,553	1/1:1,9:10:24.04:232,24,0	0/0:34,0:34:87.26:0,87,1037	0/0:28,0:28:72.02:0,72,817	0/0:21,0:21:54.16:0,54,643	0/0:19,0:18:54.14:0,54,629	0/0:8,0:8:20.96:0,21,233	0/0:15,0:15:36.10:0,36,426	0/0:22,0:22:57.13:0,57,671	0/0:13,0:13:36.06:0,36,417	1/1:5,26:31:60.09:579,60,0	1/1:5,18:23:48.07:464,48,0	0/0:17,0:17:48.09:0,48,541	1/1:1,15:16:24.03:232,24,0
chr10	89782016	.	TA	T	3039.55	PASS	AB=0.744;AC=34;AF=0.607;AN=56;BaseQRankSum=10.252;DP=525;FS=8.168;HRun=12;HaplotypeScore=82.1191;InbreedingCoeff=0.7087;MQ=65.10;MQ0=0;MQRankSum=0.856;QD=8.33;ReadPosRankSum=3.042;VQSLOD=2.4482;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:21:29.40:86,29,0	1/1:0,0:4:6.11:18,6,0	0/0:20,1:14:4.21:0,4,195	0/1:11,0:8:12.69:13,0,35	0/0:23,0:24:32.06:0,32,343	1/1:3,16:19:30.84:271,31,0	0/1:4,10:14:3.55:159,0,4	1/1:9,29:40:53.96:574,54,0	0/0:7,0:7:18.04:0,18,183	1/1:4,0:27:47.55:142,48,0	1/1:5,0:17:24.43:71,24,0	0/0:18,0:18:42.07:0,42,416	0/0:14,1:15:12.82:0,13,305	0/1:13,3:16:7.20:7,0,291	1/1:2,0:14:22.40:66,22,0	1/1:1,1:17:27.43:94,27,0	1/1:4,0:32:46.84:137,47,0	0/0:20,0:21:43.64:0,44,414	1/1:3,22:25:65.72:508,66,0	1/1:4,10:14:27.72:207,28,0	0/1:2,9:11:6.53:139,0,7	0/0:17,0:17:39.07:0,39,391	0/0:18,0:18:39:0,39,371	0/0:18,1:19:21.80:0,22,385	1/1:3,0:19:30.54:88,31,0	1/1:5,0:23:36.83:107,37,0	1/1:5,24:29:41.27:504,41,0	1/1:0,0:12:20.37:59,20,0
chr10	89782633	.	A	AC	625.67	PASS	AB=0.742;AC=10;AF=0.185;AN=54;BaseQRankSum=-1.643;DP=504;FS=32.324;HRun=0;HaplotypeScore=119.5243;InbreedingCoeff=0.3540;MQ=65.04;MQ0=1;MQRankSum=-0.249;QD=4.78;ReadPosRankSum=0.843;VQSLOD=1.7402;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:69.15:0,69,868	./.	0/0:17,0:15:14.22:0,14,281	0/0:22,0:17:34.27:0,34,436	1/1:13,9:22:10.57:216,11,0	0/0:20,0:20:51.16:0,51,668	0/0:17,0:17:48.15:0,48,604	0/0:35,0:35:99:0,99,1303	0/1:12,5:17:26.13:80,0,26	0/0:20,0:20:60.19:0,60,794	0/0:13,0:13:39.12:0,39,513	0/1:15,3:18:11.74:12,0,39	0/1:7,6:13:0.02:22,0,0	0/0:11,0:11:4.32:0,4,19	0/0:19,0:19:45.15:0,45,602	0/0:19,0:19:54.15:0,54,663	0/0:14,0:14:38.57:0,39,456	1/1:5,5:10:19.02:125,19,0	0/0:22,0:22:62.98:0,63,772	0/0:17,0:18:51.10:0,51,610	0/0:21,0:22:54.06:0,54,667	0/1:8,6:14:6.19:84,0,6	0/1:10,5:15:25.97:127,0,26	0/1:12,10:22:16.36:111,0,16	0/0:21,0:21:57.19:0,57,764	0/0:21,0:21:63.20:0,63,849	0/0:18,0:18:51.14:0,51,651	0/0:15,0:15:44.98:0,45,579
chr10	89782634	.	GA	G	4378.72	PASS	AB=0.767;AC=31;AF=0.574;AN=54;BaseQRankSum=-4.656;DP=518;FS=14.658;HRun=13;HaplotypeScore=110.0011;InbreedingCoeff=0.7304;MQ=64.31;MQ0=1;MQRankSum=0.887;QD=12.84;ReadPosRankSum=8.785;VQSLOD=2.7382;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:15,14:29:32.34:333,32,0	./.	0/1:17,1:15:18.82:19,0,48	0/0:21,0:17:10.68:0,11,115	0/0:23,0:23:43.29:0,43,255	1/1:5,14:21:42.73:296,43,0	1/1:5,11:17:5.66:195,6,0	1/1:9,23:33:36.35:417,36,0	0/0:20,0:20:38.97:0,39,218	1/1:1,19:20:56.55:411,57,0	1/1:1,12:13:35.80:262,36,0	0/0:19,0:19:31.24:0,31,177	0/0:15,0:15:10.44:0,10,53	0/0:16,0:16:10.48:0,10,59	0/1:15,6:21:12.16:91,0,12	1/1:1,16:17:41.71:306,42,0	1/1:6,6:12:14.83:107,15,0	0/0:10,0:10:13.32:0,13,53	0/1:6,15:23:17.59:244,0,18	1/1:5,10:17:30.79:238,31,0	1/1:9,15:24:11.64:253,12,0	0/0:16,0:16:23.71:0,24,147	0/0:15,0:15:24.41:0,24,153	0/0:21,0:21:27.71:0,28,125	1/1:3,18:21:47.68:350,48,0	1/1:5,16:21:50.61:371,51,0	1/1:8,10:18:14.26:201,14,0	1/1:2,13:15:38.75:284,39,0
chr10	89782678	.	CCT	C	1594.20	PASS	AB=0.933;AC=15;AF=0.268;AN=56;BaseQRankSum=2.415;DP=505;FS=11.622;HRun=0;HaplotypeScore=136.6957;InbreedingCoeff=0.6927;MQ=59.02;MQ0=17;MQRankSum=-5.731;QD=8.48;ReadPosRankSum=-0.329;VQSLOD=2.9152;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:3.16:0,3,43	0/0:4,0:4:2.60:0,3,6	1/1:60,0:16:2.47:11,2,0	0/0:72,0:19:0.41:0,0,52	0/0:15,0:15:24.07:0,24,367	0/0:17,0:17:36.81:0,37,373	0/0:14,0:14:20.40:0,20,225	0/0:27,0:27:45.11:0,45,598	0/0:15,0:15:14.33:0,14,339	1/1:15,18:29:29.15:658,29,0	1/1:5,9:14:8.91:77,9,0	0/1:13,1:14:6.36:6,0,395	0/0:6,0:6:5.90:0,6,98	0/0:11,0:11:21.07:0,21,342	0/0:12,0:11:4.41:0,4,29	1/1:8,10:19:29.21:284,29,0	0/0:10,0:10:1.19:0,1,16	0/0:11,1:11:11.78:0,12,274	0/0:17,0:17:29.39:0,29,299	0/0:13,0:13:25.66:0,26,223	0/0:7,0:5:9:0,9,108	0/0:10,0:10:21.07:0,21,331	0/0:10,0:10:10.89:0,11,203	0/0:16,0:16:27.56:0,28,441	1/1:8,10:18:17.87:168,18,0	1/1:7,9:17:29.93:345,30,0	0/0:12,0:12:27.94:0,28,241	1/1:8,4:12:20.98:224,21,0
chr10	89782699	.	CCCTG	C	2781.26	PASS	AB=0.979;AC=33;AF=0.589;AN=56;BaseQRankSum=-0.158;DP=462;FS=2.507;HRun=0;HaplotypeScore=127.2667;InbreedingCoeff=0.5145;MQ=41.87;MQ0=23;MQRankSum=-5.748;QD=9.40;ReadPosRankSum=-2.326;VQSLOD=2.7838;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,1:19:18.12:256,18,0	1/1:3,0:3:6.02:85,6,0	0/0:55,0:7:11.18:0,11,132	0/1:83,0:12:0.89:1,0,78	0/0:13,0:13:21.05:0,21,344	1/1:7,4:12:35.97:465,36,0	1/1:7,3:10:14.96:181,15,0	1/1:10,0:10:2:213,2,0	0/0:15,0:15:9.52:0,10,373	0/1:25,1:22:35.09:141,0,35	0/0:17,0:17:0.68:0,1,1	0/0:14,0:14:17.67:0,18,351	0/1:6,0:6:26.54:27,0,67	0/1:15,0:15:6.11:6,0,319	1/1:10,0:9:14.86:181,15,0	1/1:18,1:19:5.16:154,5,0	1/1:10,0:10:14.46:157,14,0	0/0:10,0:9:18.85:0,19,348	1/1:4,2:6:18.02:267,18,0	1/1:9,3:11:23.68:276,24,0	1/1:3,1:2:3.48:42,3,0	0/0:12,0:12:17.96:0,18,322	0/0:14,0:14:12.50:0,13,231	0/0:16,0:16:27.08:0,27,518	1/1:18,0:17:2:6,2,0	0/1:13,1:14:59.32:123,0,59	1/1:6,4:10:9.84:298,10,0	1/1:8,0:8:14.25:94,14,0
chr10	89782717	.	CT	C	660.20	PASS	AB=0.702;AC=7;AF=0.130;AN=54;BaseQRankSum=-4.944;DP=471;FS=15.323;HRun=1;HaplotypeScore=136.3267;InbreedingCoeff=-0.1332;MQ=35.48;MQ0=22;MQRankSum=0.038;QD=7.68;ReadPosRankSum=-2.398;VQSLOD=-0.7024;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:18:1.27:0,1,5	./.	0/0:39,0:6:14.85:0,15,155	0/0:55,0:8:3.08:0,3,56	0/0:19,0:18:17.38:0,17,210	0/1:8,9:16:56.77:191,0,57	0/1:8,4:10:9.86:70,0,10	0/1:3,7:9:94.24:176,0,94	0/0:17,0:16:30.09:0,30,385	0/0:27,0:24:63.01:0,63,781	0/0:18,0:19:6.08:0,6,47	0/0:15,0:15:26.87:0,27,330	0/0:7,0:5:8.89:0,9,127	0/0:12,0:12:11.95:0,12,167	0/0:12,0:12:11.65:0,12,144	0/0:18,0:18:37.49:0,37,375	0/0:12,0:12:16.06:0,16,190	0/0:12,0:11:30.06:0,30,375	0/1:2,3:5:34.90:105,0,35	0/1:9,8:13:37.28:153,0,37	0/1:3,3:3:25.84:71,0,26	0/0:13,0:13:14.98:0,15,199	0/0:18,0:18:16.47:0,16,166	0/0:16,0:16:17.59:0,18,262	0/0:22,0:21:2.67:0,3,41	0/0:18,0:18:51.13:0,51,687	0/1:18,1:18:21.41:21,0,84	0/0:11,0:11:24.04:0,24,303
chr10	89782736	.	C	CCT	767.21	PASS	AB=0.980;AC=19;AF=0.339;AN=56;BaseQRankSum=8.083;DP=449;FS=26.681;HRun=0;HaplotypeScore=136.6590;InbreedingCoeff=0.2482;MQ=42.84;MQ0=33;MQRankSum=-2.407;QD=3.38;ReadPosRankSum=-1.289;VQSLOD=1.0962;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:17:20.21:0,20,172	0/0:3,0:3:0.36:0,0,3	0/0:10,0:2:6:0,6,62	0/0:27,0:13:0.77:0,1,74	0/1:25,0:22:0.08:0,0,0	0/0:13,0:10:24.07:0,24,291	0/0:10,0:8:21.03:0,21,260	0/0:24,0:21:56.79:0,57,670	0/0:15,1:15:1.74:0,2,77	1/1:26,0:23:12.33:156,12,0	1/1:15,0:15:13.64:56,14,0	0/1:15,0:14:0.55:59,0,1	0/1:10,0:8:10.73:15,0,11	0/1:14,0:13:23.76:24,0,37	0/0:22,0:21:2.11:0,2,43	0/1:13,2:14:18.78:82,0,19	0/1:16,0:16:19.24:19,0,63	0/1:14,0:12:7.66:8,0,87	0/0:15,0:11:26.86:0,27,308	0/0:15,0:11:29.58:0,30,351	0/0:10,0:5:11.24:0,11,103	1/1:17,0:15:7.04:48,7,0	0/1:20,0:20:7.67:18,0,8	0/0:16,0:15:4.90:0,5,55	1/1:16,0:16:8.78:108,9,0	0/1:15,1:16:28.68:140,0,29	0/0:19,0:18:24.04:0,24,285	1/1:7,0:8:17.08:201,17,0
chr10	89782738	.	TCTCC	T	620.52	PASS	AB=0.975;AC=18;AF=0.321;AN=56;BaseQRankSum=5.083;DP=442;FS=7.219;HRun=0;HaplotypeScore=139.1128;InbreedingCoeff=-0.3044;MQ=44.90;MQ0=32;MQRankSum=-3.061;QD=2.44;ReadPosRankSum=-2.149;VQSLOD=1.8137;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:17:42.47:42,0,210	0/1:3,0:3:4.89:45,0,5	0/1:10,0:2:7.94:8,0,32	0/0:27,0:15:7.55:0,8,217	0/0:22,3:22:1.62:0,2,6	0/0:13,0:10:24.08:0,24,536	0/0:10,0:8:21.07:0,21,446	0/0:26,0:23:61.57:0,62,1110	0/0:15,0:14:2.70:0,3,155	0/1:24,0:22:12.85:13,0,139	0/1:12,1:13:22.67:23,0,30	0/1:14,0:13:53.43:53,0,57	0/1:11,0:9:5.67:6,0,70	0/1:13,1:13:27.11:27,0,87	0/1:22,0:21:99:139,0,109	0/1:15,1:15:54.40:65,0,54	0/1:15,0:15:61.96:62,0,86	0/0:12,0:10:7.43:0,7,165	0/0:15,0:11:29.89:0,30,596	0/0:15,0:11:30.57:0,31,659	0/0:10,0:5:14.90:0,15,231	1/1:17,0:15:10.35:85,10,0	0/1:18,2:21:32.03:36,0,32	0/1:16,0:15:10:10,0,93	0/1:16,0:16:19.80:92,0,20	0/1:15,0:15:36.37:36,0,178	0/0:19,0:18:24.08:0,24,527	0/1:7,1:8:35.76:36,0,64
chr10	89782742	.	C	CCT	1931.77	PASS	AB=0.931;AC=24;AF=0.429;AN=56;BaseQRankSum=6.791;DP=437;FS=21.261;HRun=0;HaplotypeScore=133.2985;InbreedingCoeff=0.2469;MQ=48.54;MQ0=31;MQRankSum=-4.205;QD=7.43;ReadPosRankSum=-2.119;VQSLOD=1.4500;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,2:18:66.18:66,0,104	1/1:4,0:4:9.01:110,9,0	0/0:9,0:2:2.98:0,3,22	0/0:25,0:17:6.45:0,6,139	0/1:23,1:21:0.01:0,0,0	0/0:13,0:10:20.85:0,21,324	0/0:11,0:9:21.07:0,21,288	0/0:27,0:24:60.57:0,61,708	0/1:15,0:15:15.84:16,0,104	1/1:14,6:18:18.61:268,19,0	1/1:8,6:14:15.43:115,15,0	0/1:11,0:10:29.71:38,0,30	0/1:10,1:9:42.22:46,0,42	0/1:13,0:12:22.62:23,0,36	0/1:18,2:19:28.83:157,0,29	0/1:14,3:16:9.68:195,0,10	0/1:15,3:18:41.76:116,0,42	0/0:13,0:11:18.97:0,19,142	0/0:16,0:12:31.95:0,32,358	0/0:16,0:12:32.60:0,33,436	0/0:10,0:5:12:0,12,143	1/1:16,0:14:8.94:56,9,0	0/1:18,2:20:10.71:31,0,11	0/0:15,0:14:4.94:0,5,56	1/1:13,5:18:27.03:317,27,0	1/1:8,5:13:9.65:359,10,0	0/0:20,0:19:27.08:0,27,355	1/1:3,3:6:14.17:206,14,0
chr10	89782748	.	CCT	C	338.42	PASS	AB=0.981;AC=20;AF=0.357;AN=56;BaseQRankSum=6.346;DP=437;FS=9.391;HRun=0;HaplotypeScore=128.6564;InbreedingCoeff=0.2095;MQ=53.24;MQ0=31;MQRankSum=-4.949;QD=1.74;ReadPosRankSum=-1.321;VQSLOD=1.6070;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:17:15.80:0,16,158	0/0:5,0:5:8.02:0,8,36	0/0:14,0:5:11.25:0,11,140	0/0:31,1:22:29.14:0,29,440	0/1:23,0:20:0.93:29,0,1	0/0:16,0:13:36.02:0,36,584	0/0:13,0:11:30.09:0,30,487	0/0:28,0:25:61.40:0,61,1007	1/1:11,1:12:4.45:84,4,0	0/0:16,0:14:5.89:0,6,149	0/1:12,0:12:9.64:10,0,14	0/1:10,0:9:37.32:37,0,41	1/1:10,0:8:3.92:64,4,0	0/1:11,1:11:11.65:12,0,44	0/1:18,0:17:6.23:6,0,150	1/1:13,0:12:0.09:14,0,0	0/0:17,0:17:3.55:0,4,113	0/1:12,1:11:5.17:30,0,5	0/0:19,0:15:38.76:0,39,624	0/0:19,0:15:42.14:0,42,713	0/0:10,0:5:12.04:0,12,212	1/1:15,0:13:2.95:48,3,0	1/1:19,0:19:8.58:65,9,0	0/0:10,2:11:3.29:0,3,36	1/1:19,0:19:0.05:31,0,0	0/1:12,0:12:51.80:52,0,104	0/0:23,0:22:36.10:0,36,575	0/1:6,0:6:17.01:17,0,72
chr10	89782755	.	CCCT	C	155.55	PASS	AB=0.919;AC=14;AF=0.250;AN=56;BaseQRankSum=4.318;DP=441;FS=8.530;HRun=0;HaplotypeScore=134.2800;InbreedingCoeff=0.1122;MQ=59.97;MQ0=30;MQRankSum=-0.565;QD=1.00;ReadPosRankSum=-2.870;VQSLOD=1.1795;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:15.66:0,16,164	0/0:5,0:5:5.07:0,5,23	0/0:18,0:8:24.04:0,24,349	0/0:39,0:28:38.78:0,39,872	0/1:17,3:18:0.46:29,0,0	0/0:18,0:15:42.13:0,42,930	0/0:13,0:11:33.11:0,33,775	0/0:29,0:27:72.25:0,72,1581	0/1:13,2:15:21.45:25,0,21	0/0:16,0:14:24.71:0,25,177	0/0:11,0:11:1.79:0,2,54	0/0:6,0:5:8.51:0,9,90	0/1:9,1:8:6.72:12,0,7	0/1:12,1:12:4.20:4,0,66	0/0:16,0:15:24.58:0,25,191	0/1:10,1:10:7.65:24,0,8	0/0:17,0:17:18.68:0,19,197	0/1:10,0:8:4.39:4,0,59	0/0:18,0:14:39.13:0,39,883	0/0:20,0:16:47.65:0,48,1069	0/0:10,0:5:15.05:0,15,336	1/1:13,0:11:7.95:53,8,0	1/1:12,2:14:3.64:53,4,0	0/1:12,0:11:12.58:13,0,18	0/1:14,2:16:11.39:30,0,11	0/1:15,1:16:51.03:51,0,158	0/0:28,0:27:51.18:0,51,1143	0/1:5,1:6:4.19:4,0,132
chr10	89782756	.	CCT	C	3876.08	PASS	AB=0.789;AC=29;AF=0.518;AN=56;BaseQRankSum=6.347;DP=443;FS=28.945;HRun=0;HaplotypeScore=117.7130;InbreedingCoeff=0.3268;MQ=60.05;MQ0=30;MQRankSum=-5.341;QD=15.63;ReadPosRankSum=0.063;VQSLOD=1.4410;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,8:17:28.18:270,0,28	1/1:3,2:5:9:104,9,0	0/0:18,0:8:11.92:0,12,247	0/0:38,1:28:33.05:0,33,537	1/1:11,9:18:2.08:73,2,0	0/0:19,0:16:44.87:0,45,719	0/0:13,0:11:33.11:0,33,582	0/0:29,0:27:66.22:0,66,1109	1/1:8,7:15:27.10:306,27,0	1/1:7,9:14:21.27:298,21,0	0/1:6,6:12:5.53:156,0,6	0/1:4,2:5:37.06:99,0,37	1/1:8,2:8:15.04:180,15,0	0/1:10,3:12:34.95:157,0,35	0/1:12,4:15:32.50:243,0,33	1/1:6,5:10:27.07:321,27,0	0/1:9,9:18:39.52:199,0,40	1/1:8,2:8:11.06:109,11,0	0/0:19,0:15:39.13:0,39,642	0/0:20,0:16:47.83:0,48,809	0/0:10,0:5:15.05:0,15,250	1/1:6,7:11:24.07:295,24,0	1/1:9,5:14:20.07:212,20,0	0/1:13,0:12:12:56,0,12	1/1:9,6:15:27.24:407,27,0	0/1:13,3:16:18.32:327,0,18	0/0:28,0:27:51.17:0,51,865	0/1:5,1:6:25.17:65,0,25
chr10	89782758	.	T	TCTCC	6046.29	PASS	AB=0.886;AC=30;AF=0.536;AN=56;BaseQRankSum=5.446;DP=445;FS=34.897;HRun=0;HaplotypeScore=126.5158;InbreedingCoeff=0.4197;MQ=63.93;MQ0=27;MQRankSum=-6.062;QD=24.68;ReadPosRankSum=-0.418;VQSLOD=2.4745;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:17:17.67:273,0,18	1/1:4,0:5:8.76:92,9,0	0/0:19,0:9:11.78:0,12,225	0/0:41,0:30:21.49:0,21,606	1/1:18,1:17:5.98:115,6,0	0/0:19,0:16:44.97:0,45,761	0/0:13,0:11:33.11:0,33,620	0/0:30,0:30:72.22:0,72,1222	1/1:15,0:15:26.59:371,27,0	1/1:13,3:14:36.09:699,36,0	1/1:7,5:12:14.81:298,15,0	0/1:6,0:5:33.49:190,0,33	1/1:9,1:8:11.12:241,11,0	0/1:11,0:11:32.31:235,0,32	0/1:15,0:15:56.80:111,0,57	1/1:8,3:10:27.08:568,27,0	0/1:15,0:17:54.92:91,0,55	1/1:10,0:8:10.43:111,10,0	0/0:18,0:14:39.13:0,39,680	0/0:21,0:17:46.97:0,47,859	0/0:11,0:6:15.05:0,15,265	1/1:13,0:12:24.07:470,24,0	1/1:13,2:15:21.48:444,21,0	0/1:12,0:11:10.94:57,0,11	1/1:10,4:14:34.32:744,34,0	0/1:11,5:16:0.85:753,0,1	0/0:28,0:27:51.17:0,51,921	0/1:5,2:7:39.13:184,0,39
chr10	89782819	.	T	TA	9474.13	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=3.583;DP=540;FS=1.154;HRun=9;HaplotypeScore=83.3321;InbreedingCoeff=0.9883;MQ=73.87;MQ0=0;MQRankSum=-2.292;QD=27.38;ReadPosRankSum=4.006;VQSLOD=4.5650;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:54.15:596,54,0	1/1:0,6:6:18.05:199,18,0	0/0:11,0:13:11.15:0,11,124	0/0:14,0:14:23.96:0,24,207	1/1:7,20:27:54.99:586,55,0	0/0:19,0:19:56.99:0,57,495	0/0:12,0:12:26.97:0,27,230	0/0:44,0:43:78.80:0,79,844	1/1:2,15:18:44.95:479,45,0	1/1:3,20:23:69.17:750,69,0	1/1:2,19:21:57.07:614,57,0	1/1:1,12:13:36.06:385,36,0	1/1:2,6:8:15.04:166,15,0	1/1:0,11:11:33.09:364,33,0	1/1:4,19:23:51.14:563,51,0	1/1:0,16:15:45.12:498,45,0	1/1:1,21:22:57.15:629,57,0	1/1:0,13:12:33.09:365,33,0	0/0:28,0:29:70.98:0,71,595	0/0:26,0:26:74.95:0,75,647	0/0:9,0:9:17.95:0,18,147	1/1:1,22:24:68.98:731,69,0	1/1:4,18:23:27.87:504,28,0	1/1:0,12:12:33.09:365,33,0	1/1:5,20:25:48.13:531,48,0	1/1:4,23:27:66.16:719,66,0	0/0:28,0:28:77.94:0,78,666	1/1:0,13:13:39.11:431,39,0
chr10	89783691	.	GGA	G	408.44	PASS	AB=0.796;AC=15;AF=0.326;AN=46;BaseQRankSum=1.218;DP=86;FS=66.593;HRun=0;HaplotypeScore=20.9822;InbreedingCoeff=0.0446;MQ=93.71;MQ0=0;MQRankSum=-3.286;QD=12.01;ReadPosRankSum=-4.206;VQSLOD=0.4790;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:8.29:0,8,47	./.	0/0:10,0:9:22.31:0,22,341	0/0:12,0:11:29.68:0,30,468	0/0:6,0:6:11.77:0,12,182	0/1:3,1:4:19.43:31,0,19	1/1:0,3:3:5.93:39,6,0	0/1:3,4:7:95.71:142,0,96	0/1:2,2:4:47.82:48,0,101	0/1:3,0:3:47.96:48,0,48	./.	0/0:2,0:2:6.02:0,6,114	0/1:1,1:2:34.43:34,0,51	0/0:2,0:1:3.01:0,3,57	0/1:3,1:4:6.66:57,0,7	0/0:2,0:2:6.02:0,6,99	0/0:2,0:2:5.23:0,5,52	./.	0/0:2,0:2:3.01:0,3,57	0/0:2,0:2:3.01:0,3,57	1/1:2,0:2:2.99:23,3,0	./.	./.	0/0:2,1:3:6.02:0,6,100	1/1:0,2:2:6.02:75,6,0	0/1:2,0:2:21.71:22,0,51	0/0:1,0:1:0.47:0,0,1	1/1:1,0:1:3:26,3,0
chr10	89783693	.	A	AGTGGG	684.14	PASS	AB=1.000;AC=21;AF=0.457;AN=46;BaseQRankSum=2.377;DP=93;FS=43.764;HRun=0;HaplotypeScore=30.2986;InbreedingCoeff=0.0796;MQ=96.18;MQ0=0;MQRankSum=-3.915;QD=14.56;ReadPosRankSum=-2.752;VQSLOD=0.0466;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,3:7:7.44:115,7,0	./.	0/0:10,0:9:21.06:0,21,292	0/0:12,0:13:30:0,30,544	0/0:7,0:7:9.03:0,9,148	0/1:4,0:4:16.40:34,0,16	1/1:3,0:3:5.93:39,6,0	0/1:8,0:8:69.77:101,0,70	0/1:4,0:4:56.25:56,0,92	0/1:3,0:3:20.43:48,0,20	./.	0/0:2,0:2:6.02:0,6,87	0/1:2,0:2:34.43:34,0,39	0/0:2,0:1:3.01:0,3,43	1/1:4,0:4:12.03:189,12,0	0/1:2,0:2:28.05:28,0,37	1/1:2,0:2:3.01:37,3,0	./.	0/0:2,0:2:3.01:0,3,43	0/0:2,0:2:3.01:0,3,44	1/1:2,0:2:2.99:23,3,0	./.	./.	0/0:3,0:3:3.01:0,3,43	1/1:2,0:2:6.02:75,6,0	0/1:3,0:3:21.71:22,0,39	0/0:1,0:1:0.47:0,0,1	1/1:1,0:1:3:26,3,0
chr10	89783696	.	T	TGGGGGA	1625.47	PASS	AB=1.000;AC=39;AF=0.886;AN=44;BaseQRankSum=-1.145;DP=101;FS=12.479;HRun=0;HaplotypeScore=28.5458;InbreedingCoeff=0.2234;MQ=102.87;MQ0=0;MQRankSum=-3.396;QD=23.56;ReadPosRankSum=-2.309;VQSLOD=1.1114;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:8.60:110,9,0	./.	0/0:10,0:9:8.50:0,8,151	0/0:14,0:14:6.74:0,7,451	1/1:0,6:8:5.91:38,6,0	0/1:3,0:3:27.02:49,0,27	1/1:4,0:4:6.02:75,6,0	1/1:9,0:9:21.47:353,21,0	1/1:4,0:4:8.99:170,9,0	1/1:3,0:3:9.03:163,9,0	./.	1/1:2,0:2:3:27,3,0	1/1:2,0:2:3.01:58,3,0	1/1:3,0:2:3:25,3,0	1/1:3,0:3:6.02:101,6,0	1/1:3,0:3:6.01:128,6,0	./.	1/1:2,0:2:3:25,3,0	1/1:2,0:2:3:28,3,0	1/1:2,0:2:5.94:45,6,0	1/1:3,0:3:3.01:47,3,0	./.	./.	./.	1/1:2,0:2:6.02:111,6,0	1/1:3,0:3:6.01:83,6,0	1/1:3,0:3:7.55:54,8,0	1/1:1,0:1:3.01:50,3,0
chr10	89784867	.	C	CT	1848.92	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-0.011;DP=507;FS=1.550;HRun=11;HaplotypeScore=79.3592;InbreedingCoeff=0.9143;MQ=68.96;MQ0=0;MQRankSum=-2.232;QD=16.36;ReadPosRankSum=-3.607;VQSLOD=3.2133;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:55.45:0,55,405	0/0:5,0:5:8.95:0,9,70	0/0:16,0:14:11.77:0,12,64	0/0:5,0:3:0.47:0,0,1	0/0:14,0:15:31.86:0,32,235	0/0:15,1:16:8.37:0,8,243	0/0:18,0:18:41.75:0,42,322	0/0:27,0:27:53.75:0,54,415	0/0:13,0:13:29.86:0,30,232	1/1:10,14:24:27.85:453,28,0	1/1:7,11:18:10.99:258,11,0	0/0:21,0:21:49.74:0,50,370	0/0:9,0:9:11.07:0,11,91	0/0:9,0:9:20.89:0,21,162	0/0:26,0:26:53.73:0,54,412	1/1:8,11:19:38.86:372,39,0	0/0:34,0:35:67.74:0,68,648	0/0:26,0:27:68.57:0,69,507	0/0:15,0:17:11.70:0,12,118	0/0:22,0:22:23.84:0,24,340	0/0:12,0:12:20.87:0,21,162	0/0:12,0:12:26.83:0,27,200	0/0:20,0:20:35.67:0,36,278	0/0:14,0:14:28.91:0,29,213	1/1:9,10:19:29.88:258,30,0	1/1:6,13:20:27.69:442,28,0	0/0:29,0:30:67.67:0,68,512	1/1:6,7:13:29.67:249,30,0
chr10	89784914	.	GA	G	5635.75	PASS	AB=0.563;AC=36;AF=0.643;AN=56;BaseQRankSum=7.251;DP=567;FS=4.257;HRun=11;HaplotypeScore=67.3086;InbreedingCoeff=0.8058;MQ=66.13;MQ0=9;MQRankSum=0.691;QD=18.12;ReadPosRankSum=5.631;VQSLOD=5.6576;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:7,16:24:40.97:326,41,0	1/1:0,4:4:11.99:99,12,0	0/0:45,0:17:5.94:0,6,264	0/0:68,1:20:23.16:0,23,200	1/1:4,14:18:38.84:311,39,0	0/0:13,0:16:29.90:0,30,296	0/0:21,1:22:26.44:0,26,458	0/0:19,0:19:44.68:0,45,440	1/1:1,9:10:20.57:172,21,0	1/1:1,17:20:55.01:430,55,0	1/1:3,13:16:38.94:320,39,0	1/1:1,11:12:29.96:246,30,0	0/1:1,9:10:4.77:105,0,5	1/1:2,10:12:29.96:246,30,0	0/1:7,12:21:27.03:197,0,27	1/1:3,10:13:32.33:254,32,0	1/1:2,28:30:45.93:584,46,0	1/1:5,15:20:47.93:394,48,0	0/0:28,0:29:63.11:0,63,658	0/0:18,1:21:16.91:0,17,393	0/0:10,1:11:2.43:0,2,231	1/1:3,9:12:26.95:220,27,0	1/1:0,15:15:35.96:295,36,0	1/1:1,18:20:49.98:400,50,0	1/1:2,16:19:49.96:399,50,0	1/1:2,21:23:62.90:513,63,0	0/0:21,1:23:19.63:0,20,444	1/1:8,4:12:15.81:124,16,0
chr10	89786987	.	A	ATCGTAATG	56352.07	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-8.419;DP=741;FS=6.781;HRun=0;HaplotypeScore=163.2282;InbreedingCoeff=0.9993;MQ=60.71;MQ0=0;MQRankSum=-19.986;QD=108.37;ReadPosRankSum=3.608;VQSLOD=6.0758;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,20:29:75.26:3027,75,0	1/1:4,9:15:36.12:1470,36,0	0/0:16,0:16:36.12:0,36,975	0/0:23,0:23:61.21:0,61,1304	1/1:6,13:21:48.16:2046,48,0	0/0:25,0:25:72.23:0,72,2032	0/0:20,0:20:60.21:0,60,1744	0/0:36,0:36:99:0,105,2815	1/1:9,21:31:81.28:3347,81,0	1/1:9,25:37:99:4516,105,0	1/1:4,14:21:45.15:1925,45,0	1/1:10,23:36:87.30:3901,87,0	1/1:6,20:28:78.27:3364,78,0	1/1:8,17:29:78.27:3330,78,0	1/1:18,24:44:99:4942,120,0	1/1:14,31:47:99:5437,132,0	1/1:4,12:17:45.15:2021,45,0	1/1:9,5:17:39.13:1656,39,0	0/0:21,0:21:57.19:0,57,1607	0/0:29,0:29:87.30:0,87,2459	0/0:25,0:25:75.23:0,75,2031	1/1:12,18:31:87.30:3592,87,0	1/1:9,17:27:66.23:2622,66,0	1/1:6,20:29:75.26:2992,75,0	1/1:0,11:14:33.11:1480,33,0	1/1:11,20:34:99:4007,99,0	0/0:26,0:26:78.25:0,78,2151	1/1:9,4:13:21.07:678,21,0
chr10	89788876	.	G	GGA	1213.02	PASS	AB=0.873;AC=32;AF=0.615;AN=52;BaseQRankSum=1.532;DP=580;FS=8.294;HRun=0;HaplotypeScore=101.9117;InbreedingCoeff=0.0579;MQ=70.70;MQ0=8;MQRankSum=0.154;QD=2.81;ReadPosRankSum=-1.691;VQSLOD=0.7732;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,6:43:35.25:35,0,47	0/1:10,2:14:26.22:38,0,26	./.	./.	0/1:20,0:21:22.56:23,0,23	0/0:9,0:9:6:0,6,57	0/0:24,0:26:11.86:0,12,111	0/1:29,0:28:0:0,0,0	1/1:14,0:14:11.84:85,12,0	0/1:18,4:25:20.52:91,0,21	0/1:9,1:10:25.91:38,0,26	1/1:27,0:27:18.07:134,18,0	1/1:16,0:16:0.82:75,1,0	1/1:12,3:15:2.98:22,3,0	1/1:13,0:23:2.99:26,3,0	0/1:20,4:26:23.21:80,0,23	0/1:14,5:21:15.76:141,0,16	1/1:16,0:16:6.48:57,6,0	0/0:13,0:13:3:0,3,32	0/1:12,0:12:0:0,0,0	0/0:19,0:19:5.84:0,6,46	0/1:16,1:18:14.54:107,0,15	1/1:24,0:24:2.33:58,2,0	1/1:20,0:18:5.97:60,6,0	1/1:23,0:23:9.02:110,9,0	1/1:18,0:18:3.01:44,3,0	0/0:11,0:13:14.87:0,15,143	1/1:12,0:11:12:140,12,0
chr10	89788920	.	A	AGAAT	3657.12	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=6.783;DP=647;FS=5.434;HRun=0;HaplotypeScore=123.7033;InbreedingCoeff=0.9555;MQ=72.14;MQ0=8;MQRankSum=-1.558;QD=17.84;ReadPosRankSum=-3.270;VQSLOD=2.6529;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:88.67:0,89,1331	0/0:15,0:15:31.61:0,32,460	0/0:16,0:14:42.11:0,42,610	0/0:36,0:24:62.33:0,62,916	1/1:3,0:23:45.14:608,45,0	0/0:17,0:17:42.14:0,42,662	0/0:26,0:26:66.02:0,66,1018	0/0:25,0:24:57.11:0,57,803	1/1:2,11:15:12.04:276,12,0	0/0:30,0:30:76.93:0,77,1092	0/0:14,0:14:28.04:0,28,379	1/1:5,2:33:18.06:379,18,0	1/1:5,15:23:14.26:307,14,0	1/1:15,0:18:33.04:479,33,0	0/0:26,0:25:16.12:0,16,451	0/0:22,0:22:39.74:0,40,553	0/0:27,0:27:38.35:0,38,749	1/1:3,0:18:9.03:190,9,0	0/0:18,0:18:46.01:0,46,667	0/0:18,0:18:49.58:0,50,773	0/0:19,0:18:42.14:0,42,647	1/1:7,0:23:46.37:588,46,0	1/1:23,0:25:59.15:750,59,0	1/1:8,1:27:3.95:81,4,0	0/0:24,0:24:44.87:0,45,624	0/0:18,0:18:40.63:0,41,620	0/0:24,0:24:63.16:0,63,906	0/0:22,0:21:46.45:0,46,699
chr10	89789794	.	GA	G	1160.38	PASS	AB=0.728;AC=13;AF=0.232;AN=56;BaseQRankSum=0.696;DP=609;FS=3.974;HRun=14;HaplotypeScore=82.6992;InbreedingCoeff=0.1990;MQ=62.72;MQ0=8;MQRankSum=2.279;QD=5.58;ReadPosRankSum=3.209;VQSLOD=2.8462;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,1:47:32.62:0,33,285	0/0:3,0:11:18.60:0,19,101	0/0:17,0:10:17.19:0,17,154	0/0:14,0:7:7.55:0,8,42	0/1:14,2:16:10.51:11,0,151	0/1:8,19:27:17.51:307,0,18	0/1:9,11:23:16.83:164,0,17	1/1:9,10:20:0.78:138,1,0	0/0:23,2:27:5.86:0,6,345	0/0:24,0:24:38.99:0,39,348	0/1:13,0:13:0.88:1,0,14	0/0:24,1:26:13.22:0,13,267	0/0:17,1:17:12.25:0,12,232	0/0:16,2:17:7.98:0,8,322	0/0:11,0:26:21.06:0,21,147	0/0:21,2:24:6.77:0,7,309	0/0:10,0:32:61.11:0,61,338	0/0:22,1:23:22.24:0,22,411	0/1:7,9:17:13.56:135,0,14	0/1:5,10:15:20.42:117,0,20	1/1:9,15:24:20.85:227,21,0	0/0:15,1:16:4.52:0,5,160	0/0:15,0:14:21.46:0,21,166	0/0:26,3:30:5.46:0,5,440	0/0:19,0:21:32.75:0,33,274	0/1:24,6:31:46.49:46,0,291	1/1:4,13:18:25.64:170,26,0	0/0:6,0:6:12:0,12,107
chr10	89791203	.	GCACGCA	G	4223.72	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=0.521;DP=671;FS=3.739;HRun=0;HaplotypeScore=219.1271;InbreedingCoeff=0.4228;MQ=59.35;MQ0=4;MQRankSum=-4.335;QD=12.76;ReadPosRankSum=2.164;VQSLOD=4.1785;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:28.49:0,28,233	0/0:6,0:6:8.88:0,9,63	0/0:29,0:22:40.76:0,41,485	0/0:23,0:18:34.38:0,34,491	0/0:12,0:11:18:0,18,239	1/1:15,0:15:1.29:100,1,0	0/1:37,0:37:5.21:5,0,360	0/1:21,0:20:25.45:25,0,206	0/1:31,0:31:19.99:20,0,473	1/1:13,14:27:78.14:1408,78,0	1/1:5,2:10:11.97:186,12,0	0/0:48,0:47:54.06:0,54,1042	0/0:18,0:18:15.66:0,16,257	0/0:28,0:29:34.96:0,35,387	0/0:22,0:22:35.72:0,36,238	1/1:11,12:24:33:527,33,0	0/0:32,0:32:38.74:0,39,357	0/0:23,0:23:57.10:0,57,787	0/1:20,0:18:99:201,0,118	0/1:12,0:12:57.03:57,0,107	0/1:69,0:66:99:125,0,209	0/0:13,0:13:32.92:0,33,364	0/0:11,0:11:32.25:0,32,307	0/0:43,0:43:95.54:0,96,1200	1/1:9,12:22:17.98:274,18,0	1/1:14,7:22:58.96:945,59,0	0/1:10,0:10:34.26:121,0,34	1/1:0,7:7:11.99:229,12,0
chr10	89791207	.	GCA	G	4512.65	PASS	AB=0.792;AC=47;AF=0.839;AN=56;BaseQRankSum=2.631;DP=679;FS=0.000;HRun=0;HaplotypeScore=187.4327;InbreedingCoeff=0.2164;MQ=56.46;MQ0=4;MQRankSum=2.512;QD=7.19;ReadPosRankSum=3.935;VQSLOD=4.4048;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:33:15.24:29,0,15	1/1:6,0:6:0.47:1,0,0	0/0:27,0:20:5.93:0,6,63	0/0:24,0:19:8.36:0,8,47	1/1:5,8:12:14.25:146,14,0	1/1:10,0:16:13.94:89,14,0	0/1:20,0:37:10.22:20,0,10	1/1:21,0:21:7.22:51,7,0	1/1:22,8:30:28.30:297,28,0	1/1:30,0:27:49.30:282,49,0	0/1:9,0:10:23.03:45,0,23	1/1:30,18:47:63.08:673,63,0	1/1:9,7:16:15:170,15,0	1/1:17,9:28:6.62:214,7,0	0/1:14,0:24:12.59:65,0,13	1/1:25,0:25:19.38:126,19,0	1/1:10,1:30:20.02:193,20,0	1/1:14,10:24:44.70:495,45,0	1/1:13,0:16:15.87:79,16,0	1/1:10,0:12:5.71:30,6,0	0/1:61,1:67:15.23:102,0,15	1/1:9,5:14:20.26:195,20,0	1/1:6,4:10:14.88:153,15,0	1/1:25,18:46:73.83:763,74,0	1/1:21,1:22:1.46:24,1,0	1/1:25,0:21:33.82:181,34,0	1/1:1,0:12:8.29:41,8,0	1/1:7,0:7:8.73:49,9,0
chr10	89791233	.	ACG	A	1424.06	PASS	AB=0.991;AC=28;AF=0.500;AN=56;BaseQRankSum=3.307;DP=739;FS=32.153;HRun=0;HaplotypeScore=191.9909;InbreedingCoeff=-0.3022;MQ=42.53;MQ0=43;MQRankSum=5.991;QD=2.56;ReadPosRankSum=5.348;VQSLOD=1.0348;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:46,0:46:64.20:64,0,98	1/1:5,0:5:2.99:24,3,0	0/0:32,0:4:11.65:0,12,83	0/1:49,0:9:18.49:18,0,100	0/1:17,0:16:47.53:48,0,80	0/1:15,0:15:37.59:38,0,72	0/1:30,0:30:4.52:5,0,153	0/0:32,0:24:36.58:0,37,311	0/1:28,0:28:86.07:94,0,86	0/1:31,0:27:17.48:17,0,150	0/1:12,0:12:1.97:20,0,2	0/1:39,5:43:99:294,0,138	0/1:21,0:20:48.03:48,0,107	0/1:26,0:26:51.93:87,0,52	1/1:23,0:23:2.52:95,3,0	1/1:19,0:19:16.85:73,17,0	1/1:24,0:24:22.10:82,22,0	0/1:28,1:28:75.22:154,0,75	0/1:18,0:11:16.81:17,0,67	0/0:12,0:11:18.38:0,18,135	0/0:91,0:76:4.18:0,4,341	0/1:16,0:15:46.12:82,0,46	0/1:11,0:11:38.15:38,0,80	0/1:44,1:45:76.84:240,0,77	1/1:17,0:16:2.16:8,2,0	0/1:24,0:19:33.85:34,0,51	0/0:16,0:16:10.81:0,11,96	0/1:6,0:6:0.06:6,0,0
chr10	89791236	.	CACAT	C	507.64	PASS	AB=0.980;AC=13;AF=0.232;AN=56;BaseQRankSum=-1.431;DP=758;FS=0.000;HRun=0;HaplotypeScore=213.4526;InbreedingCoeff=0.1691;MQ=42.00;MQ0=50;MQRankSum=2.282;QD=2.48;ReadPosRankSum=-2.795;VQSLOD=2.1858;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:43:50.54:51,0,62	1/1:5,0:5:2.99:23,3,0	0/0:33,0:3:9.03:0,9,170	0/0:52,0:8:18.05:0,18,354	0/0:17,1:17:6.56:0,7,198	0/1:15,0:15:18.57:19,0,314	0/0:29,0:29:7.04:0,7,623	0/0:35,0:27:60.67:0,61,1209	0/0:29,0:29:13.03:0,13,283	0/0:31,0:27:60.44:0,60,902	0/0:12,0:12:8.42:0,8,43	0/0:46,0:45:35.91:0,36,483	0/0:21,0:20:0.99:0,1,159	0/1:28,1:29:25.87:26,0,161	1/1:24,0:24:22.20:175,22,0	0/1:18,0:18:7.81:8,0,17	1/1:22,0:22:16.35:313,16,0	0/1:29,1:29:24.87:25,0,270	0/0:21,0:12:14.29:0,14,334	0/0:13,0:12:25.90:0,26,485	0/0:96,0:81:61.81:0,62,1463	0/0:16,0:15:2.83:0,3,165	0/1:12,1:12:19.22:19,0,167	0/0:44,0:44:33.73:0,34,490	0/0:17,0:16:2.60:0,3,10	0/0:23,0:18:31.49:0,31,425	0/0:17,0:17:15.04:0,15,333	0/1:6,0:6:6.41:6,0,50
chr10	89791238	.	CAT	C	1339.75	PASS	AB=0.981;AC=18;AF=0.321;AN=56;BaseQRankSum=2.429;DP=754;FS=4.317;HRun=0;HaplotypeScore=191.5354;InbreedingCoeff=-0.1570;MQ=41.60;MQ0=53;MQRankSum=5.761;QD=3.43;ReadPosRankSum=2.114;VQSLOD=2.8367;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:44:10.69:11,0,87	1/1:6,0:6:2.99:23,3,0	0/0:33,0:3:9.03:0,9,148	0/0:51,0:6:18.06:0,18,303	0/1:19,0:18:66.60:86,0,67	0/1:15,0:15:26.56:27,0,262	0/0:31,0:31:6.51:0,7,531	0/0:36,0:27:60.67:0,61,1056	0/1:30,0:30:88.53:112,0,89	0/0:30,0:27:68.19:0,68,858	0/0:11,0:11:5.21:0,5,22	0/1:46,1:46:99:342,0,117	0/1:19,1:19:71.01:71,0,71	0/1:28,0:28:44.65:97,0,45	0/1:22,2:24:2.57:53,0,3	0/1:18,0:18:5.20:5,0,18	1/1:19,1:20:25.65:122,26,0	0/1:27,0:26:79.20:154,0,79	0/1:23,0:12:1.59:2,0,326	0/0:13,0:12:27.04:0,27,457	0/0:95,0:80:58.32:0,58,1292	0/1:12,2:13:33.21:100,0,33	0/1:13,0:12:57.12:57,0,72	0/1:43,0:43:66.10:235,0,66	0/0:17,0:16:1.25:0,1,3	0/0:22,0:17:23.24:0,23,440	0/0:17,0:17:14.91:0,15,313	0/0:6,0:6:1.88:0,2,71
chr10	89791262	.	TAC	T	736.11	PASS	AB=0.971;AC=10;AF=0.192;AN=52;BaseQRankSum=2.968;DP=744;FS=3.803;HRun=0;HaplotypeScore=162.5998;InbreedingCoeff=0.7436;MQ=41.23;MQ0=66;MQRankSum=-5.384;QD=9.32;ReadPosRankSum=-1.597;VQSLOD=3.2395;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:18.06:0,18,298	0/1:7,0:7:0:0,0,0	0/0:48,0:6:7.72:0,8,105	0/0:55,0:8:9.03:0,9,118	0/0:17,0:16:27.09:0,27,452	0/1:15,1:14:17.62:18,0,282	0/0:31,0:31:51.17:0,51,842	0/0:34,0:31:59.79:0,60,776	0/0:29,0:29:42.99:0,43,710	1/1:15,9:21:19.15:455,19,0	./.	0/0:44,0:43:77.80:0,78,1229	0/0:17,0:16:27.09:0,27,439	0/0:28,1:29:30.10:0,30,505	0/0:24,0:24:15.05:0,15,233	1/1:6,5:11:3:28,3,0	0/0:12,0:12:21.07:0,21,352	0/0:24,1:24:52.32:0,52,973	0/0:24,0:15:41.97:0,42,560	0/0:16,0:15:39.13:0,39,637	0/0:108,1:97:66.82:0,67,1603	0/0:20,0:18:39.12:0,39,632	0/0:12,0:11:21.07:0,21,354	0/0:40,2:42:51.17:0,51,852	./.	1/1:7,7:11:18.06:231,18,0	0/0:18,0:18:33.11:0,33,545	1/1:4,3:7:12.51:153,13,0
chr10	89791275	.	GCACATACA	G	137.94	PASS	AB=0.885;AC=12;AF=0.250;AN=48;BaseQRankSum=6.900;DP=737;FS=13.603;HRun=0;HaplotypeScore=192.0433;InbreedingCoeff=0.6021;MQ=41.87;MQ0=49;MQRankSum=-1.053;QD=1.47;ReadPosRankSum=-2.559;VQSLOD=1.2021;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,5:7:0.82:3,1,0	0/0:43,0:10:30.02:0,30,724	0/0:48,0:5:15.05:0,15,452	0/0:18,0:17:17.04:0,17,561	0/0:16,0:14:21.96:0,22,745	0/0:35,0:35:48.01:0,48,1607	0/0:39,0:32:54.17:0,54,1412	0/0:30,0:30:35.28:0,35,720	1/1:14,0:13:1.36:7,1,0	./.	0/0:46,0:45:42.86:0,43,1331	0/0:21,0:21:25.67:0,26,432	0/0:33,0:32:14.05:0,14,594	1/1:8,13:21:3.01:64,3,0	./.	0/1:7,3:10:63.30:63,0,77	0/1:25,0:24:5.10:5,0,1266	0/0:18,0:12:18.06:0,18,670	0/0:19,0:19:51.18:0,51,1733	0/0:128,0:120:99:0,129,4154	0/0:20,0:19:23.50:0,23,710	0/0:12,0:12:15.88:0,16,429	0/0:40,0:40:33.04:0,33,831	./.	1/1:11,0:9:13.46:79,13,0	0/0:20,0:20:39.13:0,39,1312	1/1:6,0:6:7.93:51,8,0
chr10	89791278	.	CAT	C	116.03	PASS	AB=0.891;AC=8;AF=0.154;AN=52;BaseQRankSum=5.152;DP=751;FS=12.653;HRun=0;HaplotypeScore=152.2232;InbreedingCoeff=0.1905;MQ=42.02;MQ0=50;MQRankSum=-1.991;QD=2.11;ReadPosRankSum=-4.952;VQSLOD=-0.2720;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:15.01:0,15,217	1/1:7,0:7:0.47:1,0,0	0/0:44,0:10:30.02:0,30,473	0/0:50,0:7:20.99:0,21,352	0/0:15,0:14:24.08:0,24,458	0/0:15,2:15:24.74:0,25,405	0/0:37,0:37:53.98:0,54,1001	0/0:40,0:33:78.14:0,78,1260	0/0:31,0:31:37.98:0,38,760	0/1:13,1:13:36.40:36,0,108	./.	0/0:47,0:46:62.95:0,63,1338	0/0:21,0:21:22.85:0,23,454	0/0:34,0:33:28.62:0,29,532	0/0:18,0:18:8.93:0,9,100	./.	0/1:10,1:11:36.94:37,0,190	0/0:26,0:25:15.96:0,16,945	0/0:19,0:13:35.67:0,36,591	0/0:20,0:20:54.16:0,54,993	0/0:122,9:122:99:0,146,2594	0/0:21,0:20:39.13:0,39,746	0/0:12,0:12:21.07:0,21,385	0/0:41,0:41:40.45:0,40,838	1/1:4,1:5:3:25,3,0	0/1:10,2:10:81.82:82,0,107	0/0:20,0:20:38.79:0,39,730	0/1:5,1:6:29.89:53,0,30
chr10	89791288	.	T	TAC	6363.18	PASS	AB=0.969;AC=30;AF=0.556;AN=54;BaseQRankSum=6.458;DP=826;FS=4.374;HRun=0;HaplotypeScore=148.7307;InbreedingCoeff=0.6861;MQ=41.68;MQ0=38;MQRankSum=3.128;QD=16.23;ReadPosRankSum=3.418;VQSLOD=5.0080;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:42:0:0,0,0	0/1:8,0:8:0:1,0,0	0/0:56,0:15:36.05:0,36,450	0/0:55,1:10:26.57:0,27,325	1/1:6,12:17:30.10:514,30,0	0/0:20,0:18:27.79:0,28,344	0/0:35,0:35:57.17:0,57,738	0/0:45,0:39:84.26:0,84,1096	1/1:11,23:34:47.31:705,47,0	1/1:13,0:11:2.30:29,2,0	./.	1/1:15,36:51:87.25:1414,87,0	1/1:11,15:26:20.07:439,20,0	1/1:16,23:39:39.18:531,39,0	1/1:18,0:18:2.87:18,3,0	0/0:9,0:9:0.79:0,1,2	0/1:6,1:7:26.24:43,0,26	1/1:11,16:26:56.87:888,57,0	0/0:26,0:16:32.87:0,33,359	0/0:20,0:19:54.18:0,54,718	0/0:142,0:135:99:0,153,1962	1/1:9,15:23:33.09:532,33,0	1/1:5,11:16:24.08:396,24,0	1/1:16,26:42:39.13:667,39,0	1/1:5,0:5:0.47:1,0,0	0/1:16,0:14:20.38:124,0,20	0/0:23,0:23:38.61:0,39,482	1/1:5,0:5:8.69:61,9,0
chr10	89791293	.	ACATACACACG	A	700.37	PASS	AB=0.985;AC=16;AF=0.286;AN=56;BaseQRankSum=3.659;DP=856;FS=15.594;HRun=0;HaplotypeScore=222.5561;InbreedingCoeff=-0.2003;MQ=41.52;MQ0=42;MQRankSum=-0.275;QD=2.02;ReadPosRankSum=-4.710;VQSLOD=-0.1447;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:40:0:0,0,0	1/1:8,0:8:1.29:3,1,0	0/0:60,0:15:42.14:0,42,883	0/0:62,0:11:33.11:0,33,764	0/1:18,0:18:27.29:27,0,616	0/0:21,0:19:30.99:0,31,934	0/0:34,0:34:57.17:0,57,1614	0/0:50,0:41:99:0,105,2393	0/1:35,0:35:4.58:5,0,806	0/1:13,0:10:7.66:8,0,187	0/0:6,0:5:5.99:0,6,70	0/1:52,0:50:99:199,0,1233	0/1:28,1:29:35.85:36,0,425	0/1:38,0:38:24.72:25,0,733	0/1:20,0:20:13.07:13,0,97	0/0:9,0:9:15:0,15,195	0/1:7,0:7:2.26:2,0,70	0/1:23,1:23:99:142,0,1164	0/0:31,0:19:20.62:0,21,963	0/0:21,0:20:57.20:0,57,2184	0/0:143,2:136:99:0,162,5535	0/1:22,0:21:37.03:37,0,664	0/1:18,0:18:19.17:19,0,296	0/0:38,1:39:14.29:0,14,826	0/0:7,0:7:9.02:0,9,126	0/1:17,0:13:99:212,0,212	0/0:24,0:24:41.69:0,42,1564	0/1:5,1:6:9.75:117,0,10
chr10	89791328	.	CAT	C	1780.68	PASS	AB=0.960;AC=22;AF=0.407;AN=54;BaseQRankSum=9.187;DP=807;FS=0.845;HRun=0;HaplotypeScore=158.8710;InbreedingCoeff=0.3104;MQ=40.46;MQ0=79;MQRankSum=2.414;QD=4.99;ReadPosRankSum=3.915;VQSLOD=2.4399;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:8,0:8:3.91:0,4,24	0/0:47,0:5:14.55:0,15,139	0/0:58,0:3:8.86:0,9,62	0/1:23,2:25:76.97:94,0,77	0/0:22,0:21:30.04:0,30,298	0/0:27,0:27:23.95:0,24,269	0/0:45,0:33:47.21:0,47,857	0/1:34,2:34:68.16:191,0,68	1/1:17,0:13:33.35:170,33,0	1/1:8,0:7:8.56:42,9,0	0/1:46,2:47:13.88:264,0,14	0/1:22,0:22:55.64:98,0,56	0/1:38,4:42:67.34:175,0,67	0/0:22,0:21:17.96:0,18,347	1/1:14,0:14:28.49:153,28,0	0/0:14,0:14:4.29:0,4,343	0/1:25,2:27:99:123,0,222	0/0:19,0:11:29.41:0,29,321	0/0:23,0:21:48.03:0,48,487	0/0:120,0:108:99:0,125,1249	0/1:18,0:18:31.17:31,0,35	0/1:20,0:19:41.94:42,0,153	1/1:32,2:34:19.57:125,20,0	1/1:14,1:14:19.92:96,20,0	1/1:27,1:21:42.04:332,42,0	0/0:14,0:14:32.42:0,32,317	1/1:3,0:3:5.84:34,6,0
chr10	89791330	.	TAC	T	5089.56	PASS	AB=0.638;AC=28;AF=0.538;AN=52;BaseQRankSum=2.692;DP=807;FS=0.000;HRun=0;HaplotypeScore=145.2611;InbreedingCoeff=0.6090;MQ=40.08;MQ0=81;MQRankSum=3.918;QD=14.10;ReadPosRankSum=1.588;VQSLOD=4.8701;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:2,6:8:2.92:0,3,17	0/0:47,0:4:3.01:0,3,51	./.	1/1:7,17:24:27.09:347,27,0	0/0:7,0:22:23.88:0,24,213	0/0:3,0:28:20.92:0,21,211	0/0:33,0:34:50.21:0,50,419	1/1:10,26:34:35:457,35,0	1/1:2,14:13:36.12:463,36,0	1/1:0,8:7:9.03:116,9,0	1/1:10,37:46:47.49:609,47,0	0/1:3,19:22:26.50:245,0,26	1/1:15,27:42:32.55:423,33,0	0/0:12,10:21:18.06:0,18,303	1/1:3,11:14:19.52:353,20,0	0/1:7,6:13:17.41:17,0,282	0/1:16,8:24:99:304,0,117	0/0:13,0:11:29.97:0,30,278	0/0:10,0:22:33.03:0,33,318	0/0:45,0:110:99:0,99,905	1/1:4,12:16:15.02:165,15,0	0/1:5,13:17:99:133,0,130	1/1:19,15:34:27.05:317,27,0	1/1:3,12:14:21.07:270,21,0	1/1:6,22:22:63.14:793,63,0	0/0:3,0:15:29.38:0,29,245	1/1:1,2:3:6.02:77,6,0
chr10	89791361	.	A	ACG	516.24	PASS	AB=0.861;AC=4;AF=0.074;AN=54;BaseQRankSum=-0.749;DP=784;FS=0.000;HRun=0;HaplotypeScore=199.5601;InbreedingCoeff=0.3465;MQ=37.33;MQ0=53;MQRankSum=0.891;QD=12.01;ReadPosRankSum=0.818;VQSLOD=3.2382;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:8,0:7:3.01:0,3,40	0/0:22,0:2:6.02:0,6,85	0/0:34,0:5:15.05:0,15,219	0/0:26,0:25:29.69:0,30,423	0/0:28,0:28:34.30:0,34,462	0/0:31,0:27:15.84:0,16,179	0/0:39,0:27:71.72:0,72,969	0/0:40,0:39:44.90:0,45,610	0/0:28,0:25:59.99:0,60,805	0/0:15,0:14:14.89:0,15,176	0/0:50,0:49:50.18:0,50,660	0/0:28,0:27:38.64:0,39,496	0/0:47,0:47:32.82:0,33,501	1/1:9,6:14:17.93:346,18,0	0/0:34,0:29:44.81:0,45,557	0/1:8,5:12:27.36:270,0,27	0/0:22,0:19:36.36:0,36,388	0/0:32,0:18:42.43:0,42,524	0/0:22,0:20:30.10:0,30,456	0/0:89,1:78:84.97:0,85,1216	0/0:19,0:19:8.70:0,9,137	0/0:17,0:15:20.84:0,21,298	0/0:25,0:23:17.85:0,18,274	0/0:25,0:22:24.94:0,25,345	0/0:31,0:26:73.62:0,74,1058	0/1:15,0:15:9.96:10,0,230	0/0:3,0:2:6.02:0,6,92
chr10	89791376	.	TACACAC	T	507.09	PASS	AB=0.893;AC=17;AF=0.370;AN=46;BaseQRankSum=2.294;DP=743;FS=24.421;HRun=0;HaplotypeScore=221.4990;InbreedingCoeff=0.3066;MQ=37.97;MQ0=52;MQRankSum=0.963;QD=1.46;ReadPosRankSum=-0.118;VQSLOD=0.8651;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:7,0:6:2.90:16,3,0	./.	./.	1/1:24,2:26:4.22:51,4,0	0/1:33,0:33:1.13:1,0,66	0/1:32,0:27:27.61:28,0,43	0/0:41,0:29:11.68:0,12,77	1/1:34,7:40:19:238,19,0	0/0:33,0:30:29.28:0,29,326	0/0:15,0:13:8.94:0,9,106	0/1:42,7:49:2.70:136,0,3	1/1:21,2:23:10.53:78,11,0	0/1:32,17:49:1.84:30,0,2	./.	0/0:40,0:35:9.44:0,9,145	./.	0/1:21,1:19:16.22:53,0,16	0/0:29,0:18:6.64:0,7,136	0/1:20,0:18:10.44:10,0,60	0/0:79,0:67:9.82:0,10,104	0/1:12,9:20:0:0,0,0	0/0:13,1:12:0.47:0,0,1	1/1:21,1:20:0.53:2,1,0	0/0:26,0:23:10.19:0,10,144	0/0:32,0:29:16.75:0,17,369	0/0:15,0:15:5.88:0,6,43	0/0:5,0:4:1.82:0,2,5
chr10	89792603	.	T	TCCAC	22057.89	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-7.321;DP=698;FS=4.791;HRun=0;HaplotypeScore=127.4059;InbreedingCoeff=0.9996;MQ=86.99;MQ0=0;MQRankSum=-7.727;QD=66.04;ReadPosRankSum=4.298;VQSLOD=6.9149;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,132,2439	0/0:9,0:9:24.08:0,24,456	0/0:26,0:26:60.64:0,61,1033	0/0:29,0:29:81.22:0,81,1487	1/1:1,16:17:42.10:1025,42,0	0/0:26,0:26:69.22:0,69,1277	0/0:20,0:20:57.18:0,57,1043	0/0:39,0:39:99:0,111,2039	1/1:3,21:23:57.20:1528,57,0	1/1:2,13:16:39.13:1021,39,0	1/1:1,13:15:33.11:889,33,0	1/1:3,20:24:51.06:1335,51,0	1/1:1,20:22:54.19:1448,54,0	1/1:1,22:24:63.22:1699,63,0	0/0:41,0:41:99:0,114,2128	1/1:3,33:36:99:2728,105,0	0/0:22,0:22:63.22:0,63,1195	1/1:4,17:21:54.19:1422,54,0	0/0:18,0:18:48.15:0,48,880	0/0:24,0:24:69.24:0,69,1310	0/0:32,0:32:90.27:0,90,1628	1/1:0,15:15:42.14:1112,42,0	1/1:2,15:17:48.16:1274,48,0	1/1:6,36:44:99:2682,102,0	1/1:1,19:21:45.15:1211,45,0	1/1:3,23:27:75.26:1875,75,0	0/0:29,0:29:81.28:0,81,1530	1/1:0,10:11:30.10:809,30,0
chr10	89793866	.	AC	A	7018.17	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=2.431;DP=619;FS=4.496;HRun=9;HaplotypeScore=78.3269;InbreedingCoeff=0.9952;MQ=75.42;MQ0=0;MQRankSum=-0.997;QD=22.42;ReadPosRankSum=4.485;VQSLOD=5.6161;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:70.34:0,70,677	0/0:1,0:11:14.10:0,14,82	0/0:13,0:12:23.10:0,23,243	0/0:18,1:20:24.56:0,25,239	1/1:3,12:15:39.02:356,39,0	0/0:13,0:13:33.08:0,33,371	0/0:27,0:27:75.19:0,75,843	0/0:32,0:31:45.11:0,45,499	1/1:4,17:21:48.02:439,48,0	1/1:1,18:19:54.02:490,54,0	1/1:1,11:12:33:302,33,0	1/1:1,27:28:75.04:686,75,0	1/1:2,22:24:57.03:521,57,0	1/1:4,30:34:81.03:741,81,0	0/0:3,0:21:28.57:0,29,176	1/1:6,24:30:72.02:659,72,0	0/0:10,0:36:35.40:0,35,206	1/1:1,26:27:69.04:631,69,0	0/0:13,0:14:36.09:0,36,398	0/0:13,0:13:36.11:0,36,415	0/0:40,0:40:99:0,99,1140	1/1:2,17:19:48.02:439,48,0	1/1:4,9:13:26.96:245,27,0	1/1:6,25:31:72.03:659,72,0	1/1:5,12:17:42.02:383,42,0	1/1:5,12:17:33.01:302,33,0	0/0:23,0:23:60.12:0,60,653	1/1:0,6:6:18.01:165,18,0
chr10	89794601	.	CATAT	C	1968.27	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.882;DP=667;FS=4.231;HRun=0;HaplotypeScore=106.9284;InbreedingCoeff=0.9996;MQ=81.78;MQ0=1;MQRankSum=-4.383;QD=53.20;ReadPosRankSum=2.834;VQSLOD=5.0808;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:99:2063,99,0	0/0:11,0:11:33.11:0,33,937	0/0:19,0:19:57.20:0,57,1557	0/0:23,0:23:59.27:0,59,1609	0/0:22,0:22:66.23:0,66,1809	0/0:17,0:17:48.16:0,48,1375	0/0:38,0:38:99:0,114,3254	0/0:30,0:30:90.30:0,90,2514	0/0:23,0:23:69.24:0,69,1993	0/0:27,0:27:81.28:0,81,2348	0/0:15,0:15:45.15:0,45,1296	0/0:24,0:24:72.25:0,72,2006	0/0:26,0:26:78.21:0,78,2102	0/0:24,0:24:72.25:0,72,2077	0/0:26,0:26:78.27:0,78,2258	0/0:24,0:24:72.23:0,72,1905	0/0:39,0:39:99:0,117,3307	0/0:15,0:15:45.15:0,45,1304	0/0:22,0:22:66.20:0,66,1683	0/0:21,0:21:63.22:0,63,1733	0/0:34,0:33:99:0,99,2821	0/0:20,0:20:60.21:0,60,1727	0/0:14,0:14:42.14:0,42,1198	0/0:32,0:32:96.33:0,96,2744	0/0:15,0:15:42.14:0,42,1202	0/0:23,0:23:69.24:0,69,2000	0/0:23,0:23:66.04:0,66,1879	0/0:23,0:23:69.24:0,69,1976
chr10	89794769	.	GACAC	G	525.77	PASS	AB=0.917;AC=15;AF=0.417;AN=36;BaseQRankSum=4.374;DP=441;FS=1.141;HRun=0;HaplotypeScore=77.4593;InbreedingCoeff=0.3103;MQ=68.91;MQ0=20;MQRankSum=-3.727;QD=3.48;ReadPosRankSum=0.520;VQSLOD=1.6538;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:13.06:13,0,100	1/1:5,0:5:3:28,3,0	./.	./.	./.	0/0:11,0:12:6:0,6,75	0/0:19,0:19:17.96:0,18,231	0/0:24,0:22:0:0,0,0	./.	./.	0/0:6,0:5:2.92:0,3,17	./.	0/1:10,0:13:11.02:45,0,11	./.	1/1:11,13:24:14.94:229,15,0	1/1:9,0:10:6.01:56,6,0	1/1:22,10:31:14.81:199,15,0	./.	0/1:15,0:15:6.72:34,0,7	0/0:5,0:6:5.75:0,6,77	0/0:43,0:40:44.61:0,45,623	0/1:4,0:5:17.84:22,0,18	./.	0/0:39,0:37:11.63:0,12,77	1/1:7,0:7:3:28,3,0	0/1:13,0:13:0:0,0,0	0/0:9,0:9:15.02:0,15,214	./.
chr10	89795483	.	A	AGG	23163.76	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-4.352;DP=500;FS=1.525;HRun=2;HaplotypeScore=52.9611;InbreedingCoeff=0.6262;MQ=69.15;MQ0=1;MQRankSum=-4.510;QD=46.70;ReadPosRankSum=1.984;VQSLOD=4.7522;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:69.11:1217,69,0	1/1:1,2:3:6.02:112,6,0	0/0:4,0:4:7.57:0,8,80	0/1:6,0:6:4.16:4,0,105	1/1:0,11:11:24.08:449,24,0	1/1:1,12:13:33.11:618,33,0	1/1:2,36:39:78.27:1460,78,0	1/1:2,9:12:33.10:553,33,0	1/1:0,11:11:30.10:562,30,0	1/1:0,10:10:30.09:514,30,0	1/1:1,3:5:9.03:169,9,0	1/1:0,16:16:45.15:843,45,0	1/1:1,11:12:36.12:672,36,0	1/1:0,15:15:45.15:843,45,0	1/1:0,11:11:33.11:618,33,0	1/1:1,14:15:42.14:787,42,0	1/1:3,22:25:66.23:1235,66,0	1/1:3,33:36:87.30:1628,87,0	1/1:2,14:17:45.15:809,45,0	1/1:0,9:10:24.08:449,24,0	1/1:2,85:88:99:4326,232,0	1/1:0,15:15:39.11:730,39,0	1/1:1,7:8:18.06:337,18,0	1/1:1,27:28:63.22:1180,63,0	1/1:2,18:20:51.17:948,51,0	1/1:0,20:20:60.21:1086,60,0	1/1:0,13:13:33.11:618,33,0	1/1:1,9:10:21.07:393,21,0
chr10	89796576	.	ACC	A	2451.05	PASS	AB=0.851;AC=23;AF=0.411;AN=56;BaseQRankSum=-2.590;DP=561;FS=16.108;HRun=11;HaplotypeScore=92.3166;InbreedingCoeff=0.7678;MQ=75.49;MQ0=9;MQRankSum=1.092;QD=8.57;ReadPosRankSum=2.833;VQSLOD=0.4395;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:13,1:41:8.35:8,0,74	1/1:4,6:10:10.04:123,10,0	0/0:39,0:16:33.73:0,34,289	0/0:33,0:14:27.92:0,28,244	0/0:12,0:12:24.89:0,25,232	1/1:23,0:23:19.68:228,20,0	1/1:20,0:19:34.92:286,35,0	1/1:20,0:17:20.26:165,20,0	0/0:12,0:13:15.06:0,15,177	0/0:20,0:20:33.17:0,33,209	0/0:12,0:12:20.69:0,21,194	0/0:23,0:24:57.74:0,58,586	0/0:12,0:12:16.96:0,17,184	0/0:19,0:19:25.71:0,26,311	1/1:2,11:12:32.65:319,33,0	0/0:12,0:12:21.06:0,21,272	1/1:10,36:46:87.59:897,88,0	0/0:29,0:30:67.67:0,68,569	1/1:11,0:10:21.94:135,22,0	1/1:17,0:19:24.61:188,25,0	1/1:21,0:21:0.18:174,0,0	0/0:12,0:12:22.90:0,23,169	0/0:6,0:6:8.55:0,9,55	0/1:23,0:24:0.55:1,0,326	0/1:12,0:12:6.37:6,0,168	0/0:22,0:24:17.72:0,18,226	1/1:24,0:25:21.25:127,21,0	0/0:5,0:5:13.67:0,14,114
chr10	89796587	.	C	CT	2117.80	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=-3.611;DP=569;FS=1.017;HRun=10;HaplotypeScore=101.2948;InbreedingCoeff=0.5575;MQ=78.61;MQ0=9;MQRankSum=-2.193;QD=5.77;ReadPosRankSum=-4.898;VQSLOD=0.8550;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:63.62:0,64,384	0/0:9,0:9:14.40:0,14,86	0/0:49,0:22:14.28:0,14,127	0/0:39,0:16:3.67:0,4,71	1/1:14,0:14:3.95:133,4,0	1/1:24,0:24:38.20:233,38,0	1/1:21,0:20:32.39:166,32,0	1/1:13,0:12:12.22:52,12,0	0/1:12,0:12:8.14:42,0,8	1/1:22,0:22:27.07:193,27,0	1/1:9,0:9:9.67:50,10,0	1/1:27,0:27:25.54:186,26,0	1/1:14,0:14:5.08:48,5,0	1/1:17,0:17:15.29:107,15,0	0/0:14,0:13:28.41:0,28,171	1/1:6,5:13:9.02:95,9,0	0/0:42,0:42:82.06:0,82,446	0/1:29,0:29:18.71:48,0,19	1/1:12,0:12:22.56:115,23,0	1/1:17,0:17:28:149,28,0	1/1:21,0:21:29.70:133,30,0	0/1:10,0:10:5.35:41,0,5	1/1:9,0:9:11.84:84,12,0	1/1:24,0:24:19.31:151,19,0	0/1:15,0:15:1.71:82,0,2	1/1:17,0:17:2.89:54,3,0	1/1:21,0:21:12.04:107,12,0	1/1:5,0:5:5.28:31,5,0
chr10	89803126	.	TGTGTGTGC	T	972.92	PASS	AB=0.956;AC=35;AF=0.729;AN=48;BaseQRankSum=-1.727;DP=229;FS=4.479;HRun=0;HaplotypeScore=54.6454;InbreedingCoeff=-0.0327;MQ=37.09;MQ0=54;MQRankSum=0.230;QD=4.68;ReadPosRankSum=-3.683;VQSLOD=0.2590;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:13:2.99:24,3,0	1/1:2,0:1:3:25,3,0	1/1:9,0:3:7.96:45,8,0	0/0:6,0:1:2.98:0,3,21	./.	0/1:11,0:10:99:101,0,105	1/1:14,0:9:11.62:82,12,0	1/1:13,0:9:5.13:81,5,0	1/1:7,0:6:2.99:25,3,0	0/1:8,0:5:7.78:25,0,8	0/1:2,4:5:0:1,0,0	1/1:13,0:8:5.67:34,6,0	1/1:5,0:5:9.27:53,9,0	1/1:5,0:3:2.92:17,3,0	0/1:7,0:5:40.90:41,0,61	1/1:7,0:5:5.94:43,6,0	0/1:17,0:13:41.08:41,0,56	1/1:11,0:6:11.93:136,12,0	0/1:9,0:6:44.83:45,0,114	0/1:3,0:1:0:0,0,0	0/1:18,0:8:3.05:59,0,3	./.	./.	1/1:16,0:14:23.16:184,23,0	./.	1/1:3,1:2:4.78:25,5,0	0/1:8,0:5:13.40:13,0,84	0/0:6,0:2:3.01:0,3,92
chr10	89803132	.	TGC	T	1611.61	PASS	AB=0.881;AC=43;AF=0.935;AN=46;BaseQRankSum=0.731;DP=228;FS=0.000;HRun=0;HaplotypeScore=45.4911;InbreedingCoeff=0.0832;MQ=38.93;MQ0=47;MQRankSum=1.613;QD=7.46;ReadPosRankSum=0.310;VQSLOD=2.5639;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:14:5.98:48,6,0	1/1:2,0:1:3:25,3,0	1/1:8,3:5:10.93:66,11,0	0/1:10,0:5:36.97:42,0,37	./.	1/1:13,0:12:27.45:244,27,0	1/1:14,0:10:18.28:124,18,0	1/1:8,3:7:11.17:139,11,0	1/1:6,0:5:2.99:25,3,0	0/1:4,5:6:3.70:47,0,4	0/1:5,0:5:0:0,0,0	1/1:13,0:8:8.83:62,9,0	1/1:5,0:5:9.73:57,10,0	1/1:5,0:3:2.92:17,3,0	1/1:7,0:5:6.46:51,6,0	1/1:7,0:5:5.94:43,6,0	1/1:16,0:12:18.62:121,19,0	1/1:10,0:6:11.90:84,12,0	1/1:3,6:7:20.60:142,21,0	./.	1/1:18,0:9:11.98:109,12,0	./.	./.	1/1:15,0:13:23.48:185,23,0	./.	1/1:4,0:2:4.21:23,4,0	1/1:6,0:5:8.29:47,8,0	1/1:5,0:2:0.47:1,0,0
chr10	89804100	.	A	AT	8181.32	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.457;DP=466;FS=0.782;HRun=6;HaplotypeScore=71.2412;InbreedingCoeff=0.9053;MQ=70.61;MQ0=8;MQRankSum=-3.806;QD=22.79;ReadPosRankSum=6.131;VQSLOD=3.9039;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:20:103,20,0	1/1:1,3:4:6.02:75,6,0	0/0:59,0:25:38.92:0,39,359	0/0:48,0:18:13.38:0,13,195	1/1:0,9:9:21.02:239,21,0	1/1:1,17:19:39.59:476,40,0	1/1:3,11:15:22.31:258,22,0	1/1:6,17:23:46.75:543,47,0	1/1:0,11:11:30.09:362,30,0	1/1:1,14:16:44.92:492,45,0	1/1:0,10:10:24.03:278,24,0	1/1:1,12:13:33.10:399,33,0	1/1:1,8:9:18.06:218,18,0	1/1:3,7:11:24.07:290,24,0	1/1:17,0:17:27:240,27,0	1/1:3,7:9:18.06:218,18,0	1/1:14,1:15:29.60:246,30,0	1/1:3,11:14:29.92:340,30,0	1/1:5,10:16:33.01:343,33,0	1/1:0,10:10:27.06:315,27,0	1/1:3,12:16:33.10:398,33,0	1/1:1,8:9:20.98:221,21,0	1/1:4,6:12:15.03:170,15,0	1/1:3,13:15:26.53:327,27,0	1/1:0,4:6:18.06:218,18,0	1/1:2,14:16:42.07:469,42,0	1/1:3,25:28:54.13:652,54,0	1/1:4,9:13:24.07:290,24,0
chr10	89804106	.	T	TTG	3745.57	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=-0.483;DP=460;FS=1.256;HRun=0;HaplotypeScore=89.1361;InbreedingCoeff=0.6128;MQ=69.13;MQ0=18;MQRankSum=0.222;QD=10.38;ReadPosRankSum=8.947;VQSLOD=2.6237;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:20:21.06:254,21,0	1/1:3,0:3:5.60:26,6,0	0/0:51,0:20:51.64:0,52,439	0/0:48,0:18:26.50:0,26,266	1/1:11,0:10:9.14:78,9,0	1/1:20,0:20:17.14:135,17,0	1/1:13,0:13:11.08:74,11,0	0/1:21,0:20:0.60:151,0,1	1/1:13,0:13:26.99:116,27,0	1/1:16,0:16:28.68:188,29,0	1/1:10,0:10:22.29:106,22,0	1/1:13,0:13:20.75:117,21,0	1/1:11,0:11:16.52:71,17,0	1/1:10,0:9:21.99:98,22,0	1/1:1,16:20:27.09:492,27,0	1/1:9,0:8:16.47:71,16,0	1/1:3,15:20:29.31:506,29,0	1/1:13,0:12:16.12:94,16,0	0/1:15,0:15:13.29:134,0,13	1/1:9,0:9:21.96:96,22,0	1/1:17,0:16:30.17:131,30,0	1/1:8,0:8:19.66:99,20,0	1/1:8,0:8:14.02:72,14,0	1/1:16,0:15:19.98:100,20,0	1/1:6,0:6:16.56:74,17,0	1/1:17,0:16:29.75:188,30,0	1/1:28,0:25:29.47:180,29,0	1/1:10,0:9:21.96:94,22,0
chr10	89804419	.	CTTATTTAT	C	1124.86	PASS	AC=10;AF=0.263;AN=38;BaseQRankSum=0.935;DP=238;FS=3.861;HRun=0;HaplotypeScore=61.8505;InbreedingCoeff=0.6119;MQ=64.29;MQ0=1;MQRankSum=-2.988;QD=14.42;ReadPosRankSum=-1.147;VQSLOD=1.7489;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:24.06:0,24,764	./.	./.	./.	0/0:5,0:5:6.02:0,6,224	1/1:6,8:14:21.07:524,21,0	./.	1/1:31,8:37:17.06:285,17,0	0/0:3,0:7:8.98:0,9,73	./.	./.	./.	0/0:4,0:4:3.01:0,3,123	0/0:4,0:4:4.57:0,5,58	0/0:4,0:8:6.02:0,6,210	0/0:6,0:6:3.01:0,3,80	0/0:14,0:24:21.07:0,21,677	0/0:14,0:14:27.09:0,27,1060	1/1:8,3:11:9.03:226,9,0	1/1:3,1:4:3.01:75,3,0	0/0:5,0:6:3.01:0,3,43	./.	./.	0/0:2,0:1:3.01:0,3,123	0/0:3,0:8:12.04:0,12,419	0/0:9,0:9:9.03:0,9,316	1/1:7,3:10:6.02:150,6,0	0/0:7,0:10:6.02:0,6,206
chr10	89804555	.	CCTCT	C	484.12	PASS	AB=1.000;AC=25;AF=0.595;AN=42;BaseQRankSum=-1.251;DP=262;FS=15.354;HRun=0;HaplotypeScore=47.9212;InbreedingCoeff=0.3701;MQ=81.92;MQ0=16;MQRankSum=-1.190;QD=3.48;ReadPosRankSum=1.536;VQSLOD=0.1121;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:18.04:0,18,345	0/0:2,0:2:3.01:0,3,51	./.	0/0:25,0:15:0.47:0,0,1	1/1:10,0:9:5.93:42,6,0	1/1:14,1:14:3.48:47,3,0	1/1:3,3:5:3.01:47,3,0	1/1:21,0:19:0.89:2,1,0	1/1:6,0:6:6.02:83,6,0	./.	0/0:5,0:5:2.60:0,3,10	1/1:7,0:7:8.21:74,8,0	./.	1/1:2,5:7:6.02:93,6,0	0/0:6,0:6:6.01:0,6,77	./.	0/0:16,0:18:29.86:0,30,480	1/1:7,5:12:3.01:47,3,0	1/1:4,1:5:3.01:45,3,0	1/1:10,2:11:5.98:67,6,0	0/1:16,0:14:3.12:12,0,3	./.	./.	1/1:6,1:6:3.01:36,3,0	0/1:11,0:11:5.14:5,0,92	0/0:3,0:6:7.57:0,8,59	./.	0/1:4,0:3:6.52:20,0,7
chr10	89810067	.	GT	G	1290.87	PASS	AB=0.944;AC=3;AF=0.054;AN=56;BaseQRankSum=6.973;DP=661;FS=8.002;HRun=1;HaplotypeScore=62.1049;InbreedingCoeff=0.5561;MQ=55.33;MQ0=16;MQRankSum=3.455;QD=21.16;ReadPosRankSum=1.226;VQSLOD=3.2294;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:43:99:1377,102,0	0/0:10,0:9:21.07:0,21,299	0/1:16,1:7:19.43:19,0,157	0/0:20,0:4:12.04:0,12,171	0/0:14,0:14:30.09:0,30,398	0/0:22,0:22:54.18:0,54,770	0/0:40,0:40:96.22:0,96,1304	0/0:27,0:26:78.16:0,78,990	0/0:26,0:26:72.22:0,72,1009	0/0:26,0:23:63.17:0,63,878	0/0:10,0:9:24.08:0,24,337	0/0:30,0:30:87.22:0,87,1196	0/0:26,0:25:60.20:0,60,856	0/0:41,0:40:99:0,105,1433	0/0:29,0:29:66.13:0,66,876	0/0:30,0:30:74.77:0,75,1052	0/0:39,0:39:99:0,108,1469	0/0:35,0:34:99:0,99,1381	0/0:23,0:22:59.83:0,60,765	0/0:10,0:8:15.05:0,15,214	0/0:49,0:48:99:0,132,1840	0/0:11,0:11:33.11:0,33,470	0/0:9,0:9:21.07:0,21,299	0/0:22,0:22:57.19:0,57,814	0/0:17,0:17:36.12:0,36,502	0/0:17,0:17:51.17:0,51,729	0/0:16,0:15:39.10:0,39,521	0/0:1,0:1:2.99:0,3,24
chr10	89811739	.	A	AT	7806.57	PASS	AB=0.875;AC=49;AF=0.907;AN=54;BaseQRankSum=-4.954;DP=316;FS=2.135;HRun=7;HaplotypeScore=27.4763;InbreedingCoeff=0.5822;MQ=57.75;MQ0=3;MQRankSum=-0.413;QD=27.68;ReadPosRankSum=1.358;VQSLOD=4.7433;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:26.33:0,26,335	1/1:1,4:5:9.03:109,9,0	0/0:15,0:8:8.74:0,9,72	0/1:6,1:4:12.10:30,0,12	1/1:0,9:8:21.06:254,21,0	1/1:1,14:13:36.11:435,36,0	1/1:0,2:2:6.02:68,6,0	1/1:3,25:27:75.20:871,75,0	1/1:2,6:7:18.05:214,18,0	1/1:2,8:10:24.07:288,24,0	1/1:2,5:7:15.05:179,15,0	1/1:0,9:9:24.07:289,24,0	1/1:0,7:7:18.05:214,18,0	1/1:1,4:5:9.03:105,9,0	1/1:0,8:8:18.05:214,18,0	1/1:0,8:8:18.05:214,18,0	1/1:5,34:37:87.27:1051,87,0	1/1:0,31:31:78.24:942,78,0	1/1:2,13:15:33.10:399,33,0	1/1:1,4:5:12.04:144,12,0	./.	1/1:0,2:2:6.02:72,6,0	1/1:1,5:6:15.04:176,15,0	1/1:1,2:3:3.01:36,3,0	1/1:2,8:9:21.06:254,21,0	1/1:3,15:18:42.11:492,42,0	1/1:1,10:11:30.09:359,30,0	1/1:1,13:14:33.10:399,33,0
chr10	89812898	.	GA	G	6699.02	PASS	AB=0.813;AC=52;AF=0.929;AN=56;BaseQRankSum=-4.521;DP=496;FS=22.605;HRun=10;HaplotypeScore=55.0709;InbreedingCoeff=0.4843;MQ=62.80;MQ0=19;MQRankSum=0.722;QD=14.99;ReadPosRankSum=5.820;VQSLOD=3.2665;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,19:22:35.92:303,36,0	1/1:1,8:9:17.99:156,18,0	0/0:47,0:12:25.01:0,25,190	0/1:51,0:14:6.13:6,0,79	1/1:5,12:17:5.78:277,6,0	1/1:5,7:12:29.03:245,29,0	1/1:7,10:18:43.98:362,44,0	1/1:6,26:32:80.94:702,81,0	1/1:4,12:16:26.98:231,27,0	1/1:7,11:18:18.85:268,19,0	1/1:4,10:14:32.90:286,33,0	1/1:3,9:12:17.94:152,18,0	1/1:1,6:7:18:156,18,0	1/1:3,4:7:17.98:152,18,0	0/1:4,6:10:4.81:89,0,5	1/1:1,11:12:17.93:156,18,0	1/1:12,30:38:68.97:597,69,0	1/1:6,11:16:20.97:182,21,0	1/1:5,6:11:25.67:230,26,0	1/1:4,12:15:37.23:312,37,0	1/1:3,6:8:8.99:78,9,0	1/1:1,2:3:9:77,9,0	1/1:3,7:10:23.98:208,24,0	1/1:3,8:10:18:156,18,0	1/1:5,13:18:29.91:260,30,0	1/1:2,18:20:53.96:464,54,0	1/1:2,21:23:53.96:461,54,0	1/1:1,5:5:15:130,15,0
chr10	89813913	.	C	CGTGTGT	1893.71	PASS	AB=0.965;AC=39;AF=0.780;AN=50;BaseQRankSum=-0.190;DP=678;FS=7.054;HRun=0;HaplotypeScore=171.7842;InbreedingCoeff=0.1316;MQ=63.96;MQ0=16;MQRankSum=-1.313;QD=3.35;ReadPosRankSum=-3.354;VQSLOD=1.4455;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:30:6.90:0,7,117	0/0:9,0:10:3.01:0,3,42	./.	./.	1/1:8,0:7:2.79:50,3,0	0/1:13,0:13:0.14:0,0,0	0/1:35,0:37:35.17:35,0,52	1/1:22,0:20:4.70:26,5,0	1/1:28,0:28:9.02:128,9,0	1/1:21,0:21:7.84:46,8,0	0/1:4,0:4:0:0,0,0	1/1:36,0:35:30.07:413,30,0	1/1:19,0:23:5.05:44,5,0	1/1:28,0:28:2.22:7,2,0	1/1:26,0:25:6:66,6,0	1/1:29,0:29:8.39:110,8,0	0/1:28,0:37:27.31:27,0,97	1/1:23,0:23:4.96:217,5,0	1/1:17,0:17:6.96:87,7,0	0/1:12,0:13:18.85:19,0,36	0/1:83,0:83:67.31:206,0,67	0/1:16,0:15:0.03:0,0,0	1/1:17,0:17:5.96:45,6,0	1/1:26,0:34:5.23:48,5,0	1/1:19,0:19:3.48:97,3,0	1/1:16,0:16:16.78:250,17,0	./.	1/1:7,2:11:3.01:96,3,0
chr10	89815387	.	A	AT	3783.09	PASS	AB=0.710;AC=31;AF=0.554;AN=56;BaseQRankSum=-6.001;DP=593;FS=1.279;HRun=14;HaplotypeScore=70.8359;InbreedingCoeff=0.7808;MQ=76.59;MQ0=1;MQRankSum=-1.584;QD=11.93;ReadPosRankSum=0.555;VQSLOD=3.6200;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,29:43:8.08:504,8,0	0/0:12,0:12:20.58:0,21,133	0/0:16,0:12:11.04:0,11,58	0/0:26,0:22:11.45:0,11,58	1/1:8,16:26:48.07:385,48,0	0/0:16,0:18:43.35:0,43,275	0/0:14,0:15:6.68:0,7,138	0/0:35,0:35:35.18:0,35,335	0/1:13,8:22:14.55:125,0,15	1/1:3,9:12:30.78:247,31,0	1/1:5,11:16:20.95:177,21,0	1/1:6,10:16:21:185,21,0	1/1:4,8:13:7.57:179,8,0	1/1:5,10:17:9.13:172,9,0	0/0:26,0:27:58.06:0,58,367	1/1:4,10:14:21:185,21,0	0/0:35,0:37:61.87:0,62,483	1/1:5,15:20:26.99:237,27,0	0/0:20,0:21:43.39:0,43,274	0/0:31,0:31:51.45:0,51,339	0/0:12,0:12:2.98:0,3,81	1/1:8,10:18:4.73:165,5,0	1/1:4,16:21:0.30:239,0,0	1/1:7,18:25:25.27:326,25,0	1/1:12,14:26:16.65:252,17,0	1/1:7,10:17:7.70:187,8,0	0/0:24,1:25:16.86:0,17,229	1/1:2,9:11:10.73:218,11,0
chr10	89817283	.	AGTGT	A	1831.59	PASS	AB=0.772;AC=32;AF=0.941;AN=34;BaseQRankSum=0.617;DP=549;FS=3.195;HRun=0;HaplotypeScore=106.6737;InbreedingCoeff=-0.1389;MQ=62.67;MQ0=13;MQRankSum=0.217;QD=5.32;ReadPosRankSum=0.850;VQSLOD=2.2052;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:31:5.14:33,5,0	./.	./.	./.	1/1:12,4:15:3.01:46,3,0	1/1:12,0:14:4.82:33,5,0	./.	./.	0/1:14,6:21:37.47:83,0,37	1/1:20,0:20:3.76:17,4,0	./.	1/1:17,4:21:6.02:92,6,0	1/1:8,6:14:20.78:302,21,0	1/1:13,6:18:12.04:183,12,0	1/1:17,0:23:17.89:167,18,0	1/1:13,0:19:15.02:140,15,0	1/1:17,0:18:8.59:83,9,0	1/1:15,5:20:17.01:238,17,0	./.	./.	./.	./.	1/1:8,1:9:3.01:46,3,0	0/1:20,7:27:18.15:211,0,18	1/1:19,0:26:6.01:56,6,0	1/1:21,0:24:6.01:56,6,0	1/1:12,0:18:15.02:139,15,0	./.
chr10	89818681	.	A	AG	25448.79	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-10.001;DP=671;FS=4.038;HRun=0;HaplotypeScore=63.4519;InbreedingCoeff=0.9875;MQ=82.00;MQ0=0;MQRankSum=-5.919;QD=43.06;ReadPosRankSum=2.666;VQSLOD=5.5242;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,1825	1/1:0,6:6:15.05:240,15,0	0/0:18,0:18:51.16:0,51,685	0/0:18,0:18:51.16:0,51,674	1/1:0,15:15:39.06:593,39,0	1/1:0,29:29:87.30:1390,87,0	1/1:0,36:36:99:1677,105,0	1/1:2,22:24:66.20:1006,66,0	1/1:0,13:13:30.10:479,30,0	1/1:1,25:26:75.24:1175,75,0	1/1:0,9:9:24.01:353,24,0	1/1:0,27:27:75.26:1198,75,0	1/1:0,18:18:54.18:858,54,0	1/1:0,30:30:84.29:1341,84,0	1/1:2,23:25:60.20:959,60,0	1/1:0,22:22:60.20:959,60,0	1/1:0,40:40:99:1773,111,0	1/1:1,33:34:81.28:1294,81,0	1/1:1,19:20:57.11:809,57,0	1/1:0,24:24:66.23:1054,66,0	1/1:4,38:42:99:1725,108,0	1/1:0,19:19:48.16:766,48,0	1/1:1,12:13:26.93:431,27,0	1/1:1,32:33:96.33:1534,96,0	1/1:0,27:27:75.26:1198,75,0	1/1:0,29:29:84.26:1295,84,0	1/1:1,23:24:69.24:1102,69,0	1/1:0,6:6:15.05:240,15,0
chr10	89819451	.	A	AT	16260.76	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-17.020;DP=821;FS=2.907;HRun=0;HaplotypeScore=72.8012;InbreedingCoeff=0.9972;MQ=87.09;MQ0=0;MQRankSum=-3.140;QD=41.27;ReadPosRankSum=6.592;VQSLOD=5.0069;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,1724	0/0:8,0:8:24.08:0,24,335	0/0:37,0:36:99:0,102,1310	0/0:24,0:23:59.24:0,59,772	1/1:0,19:19:54.10:830,54,0	0/0:22,0:22:66.20:0,66,886	0/0:29,0:29:87.23:0,87,1145	0/0:30,0:30:87.28:0,87,1185	1/1:0,24:25:75.25:1185,75,0	1/1:0,32:32:93.29:1431,93,0	1/1:1,7:8:15.05:236,15,0	1/1:0,38:38:99:1617,102,0	1/1:0,30:30:81.28:1285,81,0	1/1:0,25:25:63.21:1003,63,0	0/0:41,0:41:99:0,123,1647	1/1:1,46:47:99:2010,126,0	0/0:42,0:42:99:0,123,1635	1/1:3,38:41:87.30:1387,87,0	0/0:23,0:23:66.17:0,66,842	0/0:20,0:20:57.18:0,57,776	0/0:77,0:77:99:0,232,3097	1/1:0,14:14:39.12:620,39,0	1/1:1,14:15:39.13:621,39,0	1/1:0,36:36:84.29:1339,84,0	1/1:0,23:23:57.19:909,57,0	1/1:0,31:31:90.29:1407,90,0	0/0:31,0:31:93.29:0,93,1279	1/1:0,10:10:24.08:382,24,0
chr10	89820422	.	TC	T	1428.30	PASS	AB=0.950;AC=16;AF=0.286;AN=56;BaseQRankSum=0.950;DP=374;FS=15.417;HRun=11;HaplotypeScore=70.2882;InbreedingCoeff=0.7172;MQ=65.99;MQ0=0;MQRankSum=-1.906;QD=8.66;ReadPosRankSum=4.605;VQSLOD=0.8020;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,1:27:1.50:1,0,241	0/0:5,0:6:6:0,6,51	0/1:9,0:8:15.57:16,0,16	0/0:6,0:6:2.99:0,3,23	0/0:5,0:5:6:0,6,55	1/1:6,6:12:29.87:245,30,0	1/1:13,12:25:9.87:281,10,0	1/1:12,5:18:13.98:104,14,0	0/0:12,0:15:32.23:0,32,229	0/0:2,0:5:3:0,3,27	0/0:6,0:6:5.60:0,6,36	0/0:7,0:10:17.53:0,18,131	0/0:17,0:19:29.77:0,30,252	0/0:20,0:21:41.47:0,41,314	0/0:7,0:11:26.43:0,26,189	0/0:6,0:9:29.48:0,29,213	0/0:20,0:22:38.45:0,38,301	0/0:14,0:15:29.78:0,30,224	1/1:11,4:15:17.94:145,18,0	1/1:3,5:8:14.97:123,15,0	1/1:11,21:33:44.15:351,44,0	0/0:4,0:7:15.13:0,15,112	0/0:8,0:9:14.97:0,15,132	0/0:14,0:16:15.87:0,16,128	0/0:10,0:12:17.83:0,18,127	0/0:7,0:10:8.93:0,9,73	1/1:3,14:18:43.98:350,44,0	0/0:4,0:4:8.83:0,9,59
chr10	89820457	.	C	CCGTCTCTG	19811.30	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.738;DP=393;FS=11.555;HRun=0;HaplotypeScore=104.7142;InbreedingCoeff=0.6002;MQ=53.60;MQ0=0;MQRankSum=-4.780;QD=52.00;ReadPosRankSum=2.019;VQSLOD=4.2948;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,10:24:30.10:1223,30,0	1/1:0,1:2:3.01:128,3,0	0/0:5,0:5:9.03:0,9,209	0/0:7,0:7:9.76:0,10,339	1/1:2,2:6:6.49:238,6,0	1/1:6,8:17:21.07:864,21,0	1/1:12,14:35:42.14:1710,42,0	1/1:16,5:25:27.09:1052,27,0	1/1:2,4:9:12.04:511,12,0	1/1:2,4:15:32.96:956,33,0	1/1:2,2:4:6.02:255,6,0	1/1:7,8:21:24.08:992,24,0	1/1:2,8:13:24.08:1020,24,0	1/1:6,6:16:15.05:638,15,0	1/1:2,6:11:18.06:734,18,0	1/1:4,5:13:17.99:641,18,0	1/1:7,13:24:36.37:1536,36,0	1/1:9,9:21:33.11:1338,33,0	1/1:7,8:18:33.09:1207,33,0	1/1:6,0:6:6.02:97,6,0	1/1:19,7:26:20.33:531,20,0	1/1:3,2:9:6.02:236,6,0	1/1:3,1:5:3.48:128,3,0	1/1:3,7:11:9.03:383,9,0	1/1:1,10:15:21.07:842,21,0	1/1:3,5:12:30.10:1016,30,0	1/1:6,9:18:27.09:1151,27,0	1/1:2,3:5:9.03:384,9,0
chr10	89821862	.	GC	G	179.57	PASS	AB=0.925;AC=9;AF=0.173;AN=52;BaseQRankSum=0.759;DP=200;FS=2.929;HRun=1;HaplotypeScore=30.3056;InbreedingCoeff=0.3616;MQ=83.08;MQ0=1;MQRankSum=-1.689;QD=5.28;ReadPosRankSum=1.914;VQSLOD=0.8418;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:11.87:0,12,84	1/1:1,0:1:2.04:6,2,0	0/0:16,0:9:7:0,7,96	0/0:17,0:12:18.56:0,19,114	./.	0/0:7,0:7:8.78:0,9,51	0/0:15,0:15:4.75:0,5,98	0/0:8,0:8:17.96:0,18,149	0/0:8,0:8:1.90:0,2,67	0/0:6,0:6:5.98:0,6,48	0/0:1,0:1:2.74:0,3,12	0/0:5,0:5:9.06:0,9,59	0/0:7,1:8:4.63:0,5,36	0/1:8,1:9:10.76:11,0,23	1/1:3,0:3:9:80,9,0	0/0:11,1:12:22.50:0,23,161	1/1:8,1:9:23.75:186,24,0	0/0:14,0:14:9.48:0,9,144	0/1:6,1:7:22.10:22,0,80	0/0:2,0:2:2.22:0,2,7	0/0:17,0:17:29.04:0,29,197	0/0:1,0:1:2.99:0,3,24	./.	0/0:8,0:8:10.45:0,10,124	0/1:5,0:4:0.02:0,0,0	0/0:4,0:4:8.96:0,9,70	0/0:6,0:6:15.31:0,15,93	0/0:3,0:3:8.67:0,9,47
chr10	89822516	.	A	AT	5044.59	PASS	AB=0.577;AC=29;AF=0.518;AN=56;BaseQRankSum=-10.870;DP=532;FS=0.000;HRun=11;HaplotypeScore=82.0968;InbreedingCoeff=0.8218;MQ=69.38;MQ0=1;MQRankSum=-0.803;QD=17.76;ReadPosRankSum=0.249;VQSLOD=5.4668;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:20:32.68:0,33,317	0/0:4,0:4:8.96:0,9,70	0/0:10,0:7:14.89:0,15,108	0/0:16,0:15:4.49:0,4,77	1/1:22,11:33:61.01:566,61,0	0/0:4,0:23:5.87:0,6,53	0/0:1,0:16:28.52:0,29,82	0/0:5,0:32:43.21:0,43,134	1/1:2,12:14:30.06:304,30,0	1/1:10,25:35:68.67:656,69,0	1/1:12,9:21:1.07:331,1,0	1/1:5,12:17:45.08:452,45,0	1/1:1,10:11:20.58:212,21,0	1/1:2,17:19:27.86:464,28,0	0/0:20,0:23:50.85:0,51,360	1/1:5,17:22:36.07:365,36,0	0/0:23,0:24:67.79:0,68,517	0/1:8,22:30:9.59:458,0,10	0/0:6,0:22:35.20:0,35,107	0/0:5,0:18:22.36:0,22,65	0/0:3,0:16:22.41:0,22,65	1/1:1,4:5:11.95:105,12,0	1/1:8,12:20:1.61:191,2,0	1/1:3,8:11:18.04:183,18,0	1/1:0,17:18:17.87:167,18,0	1/1:3,15:18:42.03:408,42,0	0/0:2,0:24:40.73:0,41,118	1/1:1,9:10:18.04:183,18,0
chr10	89823398	.	G	GA	3460.51	PASS	AB=0.852;AC=29;AF=0.518;AN=56;BaseQRankSum=-0.311;DP=409;FS=18.779;HRun=0;HaplotypeScore=47.8396;InbreedingCoeff=0.7657;MQ=84.88;MQ0=0;MQRankSum=-1.410;QD=15.11;ReadPosRankSum=3.148;VQSLOD=3.3332;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:16:5.05:43,5,0	0/0:6,0:6:14.96:0,15,122	0/0:27,0:23:45.40:0,45,477	0/0:19,0:16:30.36:0,30,236	1/1:8,0:8:20.85:162,21,0	0/0:10,0:10:25.23:0,25,194	0/0:17,0:17:34.59:0,35,255	0/0:13,0:13:14.98:0,15,125	1/1:19,0:19:39.91:326,40,0	1/1:11,0:11:29.96:269,30,0	1/1:7,0:7:14.89:116,15,0	1/1:22,0:22:62.10:505,62,0	1/1:13,0:13:36.72:283,37,0	0/1:4,16:20:12.13:23,0,12	0/0:18,0:18:47.97:0,48,415	1/1:14,0:14:35.90:262,36,0	0/0:19,0:19:53.90:0,54,450	0/1:17,0:17:4.42:287,0,4	0/0:10,0:10:22.19:0,22,186	0/0:8,0:8:14.92:0,15,117	0/0:17,0:17:18:0,18,157	0/1:15,0:15:28.40:145,0,28	1/1:7,0:7:8.98:74,9,0	1/1:14,0:14:9.93:173,10,0	1/1:20,0:20:41.64:318,42,0	1/1:16,0:16:31.91:235,32,0	0/0:16,0:16:34.44:0,34,236	1/1:10,0:10:29.94:240,30,0
chr10	89823910	.	GA	G	2304.02	PASS	AB=0.743;AC=48;AF=0.857;AN=56;BaseQRankSum=-1.803;DP=627;FS=0.766;HRun=15;HaplotypeScore=86.0425;InbreedingCoeff=0.0614;MQ=77.58;MQ0=11;MQRankSum=-0.460;QD=4.07;ReadPosRankSum=4.806;VQSLOD=1.1490;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,14:24:10.72:78,0,11	1/1:3,1:9:13.11:49,13,0	0/0:60,1:26:8.34:0,8,125	0/1:39,1:23:22.97:23,0,48	0/1:8,7:15:1.63:89,0,2	1/1:2,0:14:15.31:43,15,0	1/1:3,0:24:30.54:88,31,0	1/1:14,0:32:14.40:79,14,0	1/1:8,12:21:28.60:179,29,0	0/1:9,8:18:16.97:93,0,17	1/1:14,2:16:14.26:87,14,0	1/1:16,12:29:0.87:61,1,0	1/1:4,5:9:14.57:95,15,0	1/1:4,11:15:0.49:111,0,0	1/1:11,1:25:21.33:73,21,0	1/1:7,12:20:16.78:102,17,0	1/1:7,0:23:30.52:88,31,0	1/1:5,10:19:22.82:120,23,0	1/1:12,0:23:20.02:61,20,0	1/1:4,0:5:1.67:5,2,0	1/1:10,0:28:17.34:51,17,0	1/1:9,5:15:12.79:81,13,0	0/1:14,4:19:19.28:100,0,19	1/1:12,18:34:40.43:235,40,0	1/1:11,10:24:7.97:150,8,0	1/1:16,8:25:20.35:151,20,0	1/1:4,0:20:21.55:61,22,0	0/1:11,5:16:29.21:88,0,29
chr10	89824987	.	AAACAGGTT	A	3661.19	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.782;DP=675;FS=3.598;HRun=0;HaplotypeScore=174.5609;InbreedingCoeff=0.9997;MQ=84.11;MQ0=0;MQRankSum=-10.815;QD=58.11;ReadPosRankSum=1.772;VQSLOD=3.4751;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,4847	1/1:5,10:15:30.10:821,30,0	0/0:27,0:27:78.27:0,78,2996	0/0:17,0:17:48.16:0,48,1815	0/0:19,0:19:51.17:0,51,2171	0/0:24,0:24:69.24:0,69,3028	0/0:33,0:33:93.32:0,93,3984	0/0:45,0:45:99:0,129,5334	0/0:19,0:19:54.17:0,54,2283	0/0:27,0:27:81.28:0,81,3467	0/0:15,0:15:42.14:0,42,1703	0/0:18,0:18:51.17:0,51,2172	0/0:28,0:28:84.29:0,84,3684	0/0:33,0:33:96.33:0,96,4063	1/1:2,26:28:66.23:1867,66,0	0/0:23,0:23:66.23:0,66,2863	1/1:2,18:20:36.12:973,36,0	0/0:18,0:18:54.19:0,54,2306	0/0:28,0:28:75.26:0,75,2966	0/0:26,0:26:75.26:0,75,3189	0/0:34,0:34:93.32:0,93,4096	0/0:21,0:21:57.20:0,57,2428	0/0:13,0:13:36.12:0,36,1468	0/0:17,0:17:51.18:0,51,2177	0/0:17,0:17:48.16:0,48,2003	0/0:32,0:32:90.31:0,90,3943	0/0:23,0:23:69.24:0,69,2959	0/0:15,0:15:45.15:0,45,1947
chr10	89825248	.	CCACACACACACACACACA	C	2165.65	PASS	AB=1.000;AC=18;AF=0.333;AN=54;BaseQRankSum=5.955;DP=571;FS=3.735;HRun=0;HaplotypeScore=230.3147;InbreedingCoeff=0.6245;MQ=65.04;MQ0=23;MQRankSum=-4.774;QD=10.46;ReadPosRankSum=-2.307;VQSLOD=1.7463;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:15.05:0,15,632	0/0:7,0:7:3.01:0,3,47	0/0:47,0:25:3.01:0,3,45	0/0:63,0:35:0:0,0,0	0/0:10,0:10:6:0,6,212	1/1:8,0:17:6.02:251,6,0	0/1:19,0:19:0:0,0,0	1/1:22,0:22:1.24:3,1,0	0/0:10,0:10:10.57:0,11,363	0/0:14,0:13:5.05:0,5,138	1/1:7,7:14:3.01:139,3,0	0/0:11,0:12:12.04:0,12,655	0/0:18,0:19:36.12:0,36,1538	0/0:15,0:18:9.03:0,9,579	0/0:13,0:19:24.21:0,24,550	1/1:13,9:23:18.95:826,19,0	0/0:23,0:22:19.15:0,19,395	0/0:14,0:19:33.03:0,33,1868	1/1:10,0:13:4.18:161,4,0	1/1:14,0:23:18.06:679,18,0	1/1:37,0:33:2.70:7,3,0	0/0:18,0:17:16.35:0,16,1066	0/0:8,0:8:6.02:0,6,376	0/0:19,0:23:33.11:0,33,1797	1/1:15,4:19:6.02:252,6,0	0/0:12,0:14:0:0,0,0	0/1:18,0:17:0:0,0,0	./.
chr10	89826300	.	TTC	T	2415.95	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-9.697;DP=542;FS=3.029;HRun=0;HaplotypeScore=85.7875;InbreedingCoeff=0.7916;MQ=71.92;MQ0=1;MQRankSum=-2.142;QD=13.73;ReadPosRankSum=-4.770;VQSLOD=2.1401;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:30:22.06:0,22,415	0/1:5,0:5:0.53:1,0,63	0/0:18,0:14:22.68:0,23,249	0/1:13,0:10:8.52:9,0,77	0/0:24,0:24:62.89:0,63,728	1/1:2,24:26:27.09:406,27,0	1/1:15,3:18:41.05:402,41,0	1/1:21,3:23:46:404,46,0	0/0:18,0:18:50.86:0,51,550	0/0:22,0:22:54.30:0,54,614	0/0:14,0:14:41.88:0,42,474	0/0:16,0:16:41.93:0,42,498	0/0:20,0:20:52.84:0,53,576	0/0:21,0:21:61.72:0,62,645	0/0:23,0:23:29.29:0,29,294	0/0:18,0:18:52.84:0,53,538	0/1:19,0:19:22.06:22,0,114	0/0:25,0:25:72.17:0,72,958	1/1:17,2:19:40.91:356,41,0	1/1:12,4:16:35.72:302,36,0	1/1:16,4:20:36.54:438,37,0	0/0:16,0:16:48.02:0,48,583	0/0:20,0:20:56.58:0,57,615	0/0:25,0:25:71.36:0,71,845	0/0:16,0:16:38.90:0,39,446	0/0:21,0:21:56.68:0,57,615	1/1:16,0:15:31.43:275,31,0	0/0:19,0:19:51.12:0,51,669
chr10	89826301	.	TC	T	2255.29	PASS	AB=0.936;AC=17;AF=0.304;AN=56;BaseQRankSum=-7.409;DP=551;FS=0.399;HRun=1;HaplotypeScore=82.9920;InbreedingCoeff=0.7448;MQ=73.39;MQ0=1;MQRankSum=-1.084;QD=12.39;ReadPosRankSum=-4.960;VQSLOD=0.3453;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:35.52:0,36,293	0/1:6,1:7:33.40:33,0,43	0/0:19,0:15:27.86:0,28,252	0/1:12,1:11:9.36:9,0,77	0/0:22,0:22:62.99:0,63,604	1/1:24,1:25:27.03:256,27,0	1/1:18,0:18:44.32:371,44,0	1/1:20,1:20:49.31:402,49,0	0/0:18,0:18:50.90:0,51,465	0/0:24,0:24:67.75:0,68,579	0/0:14,0:14:39.84:0,40,366	0/0:16,0:16:41.86:0,42,405	0/0:20,0:20:51.69:0,52,484	0/0:21,0:21:60.90:0,61,524	0/0:24,0:24:8.32:0,8,217	0/0:19,0:19:53.26:0,53,475	0/1:22,0:22:22.40:22,0,85	0/0:25,1:26:72.09:0,72,739	1/1:13,3:16:40.20:320,40,0	1/1:12,5:17:33.55:277,34,0	1/1:20,1:21:49.52:414,50,0	0/0:16,0:16:48.01:0,48,465	0/0:20,0:20:57.46:0,57,534	0/0:25,0:25:71.32:0,71,664	0/0:16,0:16:42.93:0,43,374	0/0:21,0:21:56.02:0,56,517	1/1:21,0:20:43.94:352,44,0	0/0:17,0:17:51.08:0,51,516
chr10	89826304	.	T	TC	1913.01	PASS	AB=0.984;AC=27;AF=0.482;AN=56;BaseQRankSum=-4.262;DP=574;FS=36.245;HRun=0;HaplotypeScore=89.0096;InbreedingCoeff=0.7822;MQ=73.06;MQ0=1;MQRankSum=1.017;QD=6.33;ReadPosRankSum=4.851;VQSLOD=1.6682;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:28.06:0,28,185	0/0:10,0:10:10.85:0,11,102	0/0:19,0:15:24.87:0,25,284	0/0:14,0:11:4.60:0,5,30	1/1:21,0:21:26.10:131,26,0	0/0:28,0:28:35.69:0,36,292	0/0:18,0:18:43.17:0,43,333	0/0:21,0:20:43.31:0,43,330	1/1:20,0:20:28.44:181,28,0	1/1:22,2:24:44.09:259,44,0	0/1:14,0:14:17.55:30,0,18	0/1:16,0:16:1.55:62,0,2	0/1:19,1:20:12.17:121,0,12	1/1:22,0:22:15.31:182,15,0	0/0:26,0:26:31.07:0,31,239	1/1:20,0:20:19.29:95,19,0	0/0:25,0:25:21.65:0,22,137	1/1:26,0:26:16.37:113,16,0	0/0:20,0:20:35.46:0,35,267	0/0:17,0:17:38.16:0,38,313	0/0:21,0:21:50.83:0,51,395	1/1:15,0:15:9.71:47,10,0	1/1:22,0:22:21.51:144,22,0	1/1:27,0:27:24.71:190,25,0	1/1:17,1:18:36.62:245,37,0	1/1:20,1:21:24.23:203,24,0	0/0:21,0:20:60.27:0,60,490	1/1:16,0:16:19.17:127,19,0
chr10	89826859	.	TGTGAGAGA	T	1704.65	PASS	AB=1.000;AC=34;AF=0.654;AN=52;BaseQRankSum=3.293;DP=360;FS=18.756;HRun=0;HaplotypeScore=105.0169;InbreedingCoeff=0.2556;MQ=35.42;MQ0=52;MQRankSum=-3.272;QD=6.36;ReadPosRankSum=-0.161;VQSLOD=0.8806;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:14:5.81:31,6,0	1/1:3,0:3:3.88:26,4,0	./.	./.	0/1:12,0:9:11.81:12,0,32	1/1:18,0:18:0.57:10,1,0	1/1:24,0:20:4.44:20,4,0	0/0:19,0:15:4.81:0,5,57	0/0:9,0:8:5.40:0,5,25	1/1:10,0:10:20.98:292,21,0	1/1:8,0:5:2.99:24,3,0	0/1:14,0:11:19.20:31,0,19	1/1:8,0:6:11.48:141,11,0	0/1:14,0:14:40.90:45,0,41	1/1:10,0:7:14.54:103,15,0	1/1:17,0:16:7.91:48,8,0	1/1:15,0:10:17.89:173,18,0	0/1:17,0:15:39.71:258,0,40	0/1:14,0:12:30.48:44,0,30	1/1:15,0:12:12.66:63,13,0	1/1:20,0:14:3.75:19,4,0	0/0:22,0:20:6.87:0,7,111	0/0:10,0:6:11.84:0,12,82	0/0:21,0:12:9:0,9,92	0/0:5,6:9:3:0,3,25	1/1:10,0:10:26.88:394,27,0	1/1:15,0:12:22.05:117,22,0	0/1:5,0:3:4.82:17,0,5
chr10	89826861	.	TGAGAGA	T	1149.27	PASS	AB=0.900;AC=25;AF=0.658;AN=38;BaseQRankSum=-0.154;DP=390;FS=51.876;HRun=0;HaplotypeScore=107.3896;InbreedingCoeff=0.2846;MQ=34.58;MQ0=52;MQRankSum=0.328;QD=4.40;ReadPosRankSum=1.197;VQSLOD=-0.5077;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/1:12,2:11:0.05:0,0,0	0/0:20,0:20:4.81:0,5,32	1/1:24,0:20:1.77:3,2,0	0/0:17,0:17:8.49:0,8,90	0/0:7,0:7:2.50:0,2,9	1/1:6,4:10:15.05:252,15,0	./.	1/1:11,0:13:3.01:37,3,0	0/1:5,4:7:2.37:105,0,2	1/1:12,4:17:3.01:54,3,0	0/1:14,0:11:0:0,0,0	0/1:13,0:16:3.39:9,0,3	0/1:17,1:13:7.88:98,0,8	1/1:18,0:16:8.38:272,8,0	0/1:16,0:14:3.29:3,0,98	1/1:16,0:13:1.21:3,1,0	1/1:24,0:17:0.85:3,1,0	0/1:22,0:20:0.02:0,0,0	./.	./.	./.	1/1:3,6:10:21.03:358,21,0	1/1:15,0:12:7.85:60,8,0	./.
chr10	89826891	.	A	AAAGG	938.10	PASS	AB=0.969;AC=20;AF=0.385;AN=52;BaseQRankSum=2.312;DP=440;FS=22.004;HRun=0;HaplotypeScore=132.9213;InbreedingCoeff=-0.1314;MQ=28.80;MQ0=41;MQRankSum=1.315;QD=3.18;ReadPosRankSum=-1.717;VQSLOD=0.9353;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:18:15.89:16,0,29	0/0:4,0:3:2.82:0,3,17	./.	./.	1/1:17,0:14:0.46:1,0,0	0/1:18,0:18:14.37:14,0,37	1/1:23,1:23:17.19:169,17,0	0/1:29,0:29:89.12:89,0,469	0/1:11,0:10:9.87:10,0,80	0/0:21,0:19:3.74:0,4,359	0/1:15,0:12:0.01:0,0,0	0/1:14,0:11:24.57:25,0,94	0/0:12,0:9:12.48:0,12,138	0/0:17,0:15:3.89:0,4,38	0/1:15,0:12:23.77:33,0,24	0/1:26,0:25:42.21:42,0,91	0/1:21,0:17:32.55:33,0,165	0/0:18,0:15:2.26:0,2,185	0/1:14,1:13:99:179,0,137	0/1:9,6:14:24.78:46,0,25	1/1:14,5:11:7.51:30,8,0	0/0:16,0:15:2.47:0,2,23	0/0:16,0:12:9:0,9,88	0/0:18,0:11:2.99:0,3,50	0/0:14,0:12:0:0,0,1	0/1:16,0:16:18.40:18,0,227	1/1:7,8:13:11.63:378,12,0	0/0:8,0:5:9.02:0,9,98
chr10	89826939	.	AAAGG	A	1254.23	PASS	AB=0.997;AC=19;AF=0.339;AN=56;BaseQRankSum=1.863;DP=461;FS=10.692;HRun=0;HaplotypeScore=145.2398;InbreedingCoeff=-0.3955;MQ=29.98;MQ0=19;MQRankSum=-3.411;QD=4.09;ReadPosRankSum=4.561;VQSLOD=1.9198;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:15.06:0,15,123	0/0:15,0:13:18.78:0,19,187	0/0:18,0:1:3.01:0,3,48	0/1:41,0:4:17.98:18,0,48	0/1:19,0:18:26.27:26,0,43	0/1:20,0:20:24.21:24,0,192	0/0:29,0:29:45.04:0,45,561	0/0:21,0:18:1.86:0,2,564	0/1:11,0:11:40.67:83,0,41	0/1:18,1:17:73.07:198,0,73	0/0:13,0:13:9.03:0,9,108	0/1:17,0:16:88.50:95,0,88	0/1:15,0:12:49.51:124,0,50	0/1:28,0:25:70.16:95,0,70	0/1:16,0:15:15.28:15,0,130	0/1:25,0:24:99:158,0,145	0/1:13,0:11:57.07:57,0,77	1/1:6,0:5:12:146,12,0	0/1:10,0:7:23.73:24,0,199	0/1:12,0:12:3.78:4,0,288	0/0:8,0:7:9.03:0,9,128	0/0:11,0:11:5.85:0,6,45	0/0:4,12:15:3.01:0,3,36	0/0:3,0:3:0.89:0,1,2	0/1:18,0:18:8.43:44,0,8	0/1:15,0:14:99:140,0,172	0/1:12,0:12:7.06:7,0,243	0/1:10,0:10:62.90:149,0,63
chr10	89828513	.	CTGTGGGT	C	2911.43	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.612;DP=666;FS=11.591;HRun=0;HaplotypeScore=167.6733;InbreedingCoeff=0.9576;MQ=83.49;MQ0=0;MQRankSum=-10.400;QD=46.21;ReadPosRankSum=4.298;VQSLOD=2.9439;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:96.31:0,96,3461	1/1:0,11:11:27.09:676,27,0	0/0:24,0:24:59.94:0,60,1678	0/0:22,0:22:47.42:0,47,1448	0/0:18,0:18:54.17:0,54,1714	0/0:23,0:23:63.16:0,63,2306	0/0:29,0:29:87.29:0,87,3225	0/0:30,0:30:84.28:0,84,3164	0/0:26,0:26:78.24:0,78,2984	0/0:26,0:26:66.22:0,66,2348	0/0:4,0:4:6.02:0,6,154	0/0:25,0:25:75.22:0,75,2731	0/0:20,0:20:54.17:0,54,1984	0/0:27,0:27:72.25:0,72,2737	1/1:1,16:17:36.12:920,36,0	0/0:28,0:28:84.26:0,84,3038	1/1:2,33:35:57.20:1458,57,0	0/0:23,0:23:69.22:0,69,2472	0/0:21,0:21:48.14:0,48,1723	0/0:19,0:19:54.14:0,54,1863	0/0:65,0:65:99:0,181,6483	0/0:21,0:21:54.17:0,54,1922	0/0:5,0:5:15.05:0,15,522	0/0:42,0:42:99:0,120,4680	0/0:14,0:14:36.12:0,36,1384	0/0:22,0:22:60.15:0,60,2171	0/0:23,0:23:63.19:0,63,2249	0/0:9,0:9:27.08:0,27,975
chr10	89828858	.	AAAAC	A	4595.24	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-10.552;DP=577;FS=13.887;HRun=0;HaplotypeScore=151.8026;InbreedingCoeff=0.0248;MQ=60.27;MQ0=8;MQRankSum=3.669;QD=9.38;ReadPosRankSum=-3.829;VQSLOD=2.6446;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:26.20:26,0,101	0/1:8,0:8:16.46:16,0,64	0/0:31,0:16:7.96:0,8,250	0/0:23,0:11:2.08:0,2,75	1/1:20,0:20:44.11:286,44,0	0/0:17,0:17:4.36:0,4,86	0/1:18,0:16:13.30:13,0,150	0/1:34,0:32:90.82:91,0,227	1/1:17,0:17:13.52:107,14,0	1/1:38,2:39:99:795,104,0	1/1:17,0:17:31.44:228,31,0	1/1:17,1:18:20.88:183,21,0	1/1:14,1:15:22.42:164,22,0	1/1:21,0:21:34.44:276,34,0	0/1:22,0:20:18.85:19,0,304	1/1:12,2:14:16.25:213,16,0	0/1:26,0:25:99:137,0,183	1/1:26,0:24:51.86:370,52,0	0/1:24,0:23:27.40:165,0,27	0/1:21,0:21:3.89:4,0,303	0/1:10,0:9:34.20:48,0,34	1/1:17,0:17:29.62:225,30,0	1/1:14,2:16:38.97:340,39,0	1/1:27,0:27:22.19:209,22,0	1/1:24,1:25:68.49:486,68,0	0/1:27,0:26:99:158,0,186	0/1:14,0:14:36.53:37,0,128	0/0:15,0:14:0.42:0,0,152
chr10	89828859	.	AAAC	A	6209.94	PASS	AB=0.995;AC=39;AF=0.696;AN=56;BaseQRankSum=-11.433;DP=573;FS=15.562;HRun=0;HaplotypeScore=136.6500;InbreedingCoeff=-0.1247;MQ=58.59;MQ0=8;MQRankSum=5.823;QD=11.83;ReadPosRankSum=-4.502;VQSLOD=2.5650;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:46.36:56,0,46	0/1:7,0:8:13.66:14,0,29	0/0:30,0:15:0.23:0,0,196	0/1:21,0:10:2.11:2,0,64	1/1:4,16:20:46.64:463,47,0	0/0:18,0:18:2.83:0,3,47	0/1:18,0:16:19.56:20,0,68	0/1:35,0:33:99:163,0,106	1/1:2,15:17:14.88:172,15,0	1/1:8,31:38:99:1031,106,0	1/1:3,14:17:32.28:291,32,0	1/1:3,15:18:20.96:243,21,0	1/1:13,2:15:25.55:200,26,0	1/1:6,15:21:42.58:420,43,0	0/1:21,0:21:22.16:22,0,172	1/1:3,11:14:26.26:258,26,0	0/1:26,0:25:93.16:131,0,93	1/1:18,8:24:63.16:560,63,0	0/1:24,0:23:5.89:197,0,6	0/1:21,0:21:19.18:19,0,154	0/1:10,0:9:12.42:44,0,12	1/1:3,13:16:29.73:303,30,0	1/1:7,9:16:41.04:423,41,0	1/1:6,21:27:22.60:309,23,0	1/1:16,9:25:69.67:606,70,0	0/1:24,2:25:88.29:206,0,88	0/1:14,0:14:47.68:48,0,77	0/1:15,0:14:10.45:10,0,63
chr10	89828860	.	AAC	A	5176.24	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=-8.217;DP=570;FS=23.381;HRun=0;HaplotypeScore=133.3776;InbreedingCoeff=-0.0812;MQ=58.72;MQ0=8;MQRankSum=5.850;QD=9.08;ReadPosRankSum=-3.814;VQSLOD=2.2471;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:6.08:59,0,6	1/1:8,0:8:0.07:16,0,0	0/1:30,0:15:0.90:1,0,173	0/1:21,0:10:8.02:8,0,66	1/1:18,2:20:46.59:371,47,0	0/1:18,0:18:5.40:5,0,9	1/1:18,0:16:4.53:53,5,0	0/1:35,0:33:18.94:213,0,19	1/1:17,0:17:12.20:115,12,0	1/1:39,0:38:99:767,106,0	1/1:17,0:17:30.09:215,30,0	1/1:18,0:18:20.82:166,21,0	1/1:15,0:15:24.27:152,24,0	1/1:20,1:21:41.24:326,41,0	0/1:23,0:21:36.03:36,0,47	1/1:14,0:14:26.40:195,26,0	0/1:26,0:25:10.01:142,0,10	1/1:27,0:25:67.35:473,67,0	1/1:24,0:23:22.23:226,22,0	0/1:21,0:21:36.17:60,0,36	1/1:10,0:9:2.18:45,2,0	1/1:14,0:14:29.66:221,30,0	1/1:16,0:16:40.90:302,41,0	1/1:27,0:27:21.98:201,22,0	1/1:23,1:24:69.99:477,70,0	0/1:26,0:25:0.37:213,0,0	0/1:15,0:15:29.98:51,0,30	1/1:13,0:12:3.85:67,4,0
chr10	89828861	.	AC	A	5319.22	PASS	AB=0.963;AC=53;AF=0.946;AN=56;BaseQRankSum=1.697;DP=562;FS=38.056;HRun=1;HaplotypeScore=125.9279;InbreedingCoeff=0.0248;MQ=57.93;MQ0=8;MQRankSum=-1.413;QD=9.46;ReadPosRankSum=3.260;VQSLOD=0.5931;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:13:12.59:96,13,0	1/1:9,0:9:13.07:62,13,0	0/1:26,2:14:7.36:7,0,139	0/1:20,1:10:28:28,0,66	1/1:19,0:19:46.22:286,46,0	1/1:16,0:16:8.19:43,8,0	1/1:18,0:16:30.57:143,31,0	1/1:33,2:33:35.01:310,35,0	1/1:17,0:17:8.42:82,8,0	1/1:38,0:37:99:635,105,0	1/1:15,1:16:31.64:189,32,0	1/1:18,0:18:20.62:129,21,0	1/1:15,0:15:25.02:136,25,0	1/1:20,1:21:29.89:252,30,0	1/1:23,0:21:26.24:125,26,0	1/1:14,0:14:26.15:157,26,0	1/1:26,0:25:40.66:218,41,0	1/1:25,2:25:67.34:393,67,0	1/1:24,0:23:56.86:310,57,0	1/1:20,1:21:14.92:151,15,0	1/1:10,0:9:2.87:56,3,0	1/1:14,0:14:29.39:182,29,0	1/1:15,0:15:40.37:236,40,0	1/1:25,1:26:19.97:145,20,0	1/1:24,0:24:69.39:396,69,0	1/1:24,2:25:36.48:299,36,0	0/1:15,0:15:3.14:84,0,3	1/1:12,1:12:27.51:167,28,0
chr10	89828862	.	C	CCCA	5232.41	PASS	AB=0.663;AC=14;AF=0.250;AN=56;BaseQRankSum=-1.601;DP=595;FS=20.926;HRun=0;HaplotypeScore=154.5891;InbreedingCoeff=-0.3164;MQ=57.51;MQ0=8;MQRankSum=-6.595;QD=17.80;ReadPosRankSum=4.840;VQSLOD=2.7743;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,7:16:15.50:416,0,16	0/1:2,0:9:14.34:14,0,34	0/0:29,0:16:36.13:0,36,430	0/0:21,0:10:19.04:0,19,235	0/0:18,0:19:32.73:0,33,161	0/1:2,0:18:10.76:110,0,11	0/1:7,12:17:24.03:512,0,24	0/1:23,10:37:99:735,0,174	0/1:17,0:18:9.21:9,0,27	0/0:36,0:39:56.69:0,57,284	0/0:15,0:16:14.68:0,15,66	0/0:16,0:18:12.63:0,13,39	0/0:5,0:15:16.85:0,17,91	0/0:19,0:21:29.16:0,29,144	0/1:8,0:21:11.96:87,0,12	0/0:13,0:14:8.34:0,8,41	0/1:12,0:25:24.27:80,0,24	0/0:26,0:25:17.23:0,17,149	0/1:12,12:26:86.46:819,0,86	0/1:12,10:25:87.08:771,0,87	0/1:8,6:13:53.14:128,0,53	0/0:14,0:14:9.70:0,10,48	0/0:15,0:15:15.95:0,16,75	0/0:24,0:27:11.67:0,12,42	0/0:21,0:24:23.95:0,24,93	0/1:14,10:28:93.18:810,0,93	0/1:8,7:18:75.87:404,0,76	0/1:8,5:12:35.86:336,0,36
chr10	89829965	.	AAAGG	A	895.52	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.937;DP=585;FS=5.438;HRun=0;HaplotypeScore=91.0460;InbreedingCoeff=0.9587;MQ=64.97;MQ0=2;MQRankSum=-2.313;QD=24.88;ReadPosRankSum=0.713;VQSLOD=3.1997;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,29:36:60.10:990,60,0	0/0:10,0:10:30.10:0,30,705	0/0:30,0:13:23.55:0,24,363	0/0:29,0:20:19.13:0,19,522	0/0:31,0:31:90.27:0,90,2095	0/0:19,0:19:54.19:0,54,1367	0/0:17,0:17:36.05:0,36,795	0/0:25,0:24:66.21:0,66,1420	0/0:9,0:9:12.04:0,12,305	0/0:28,0:28:81.28:0,81,2028	0/0:16,0:16:42.14:0,42,1050	0/0:14,0:14:30.10:0,30,746	0/0:19,0:19:54.16:0,54,1310	0/0:23,0:23:54.17:0,54,1271	0/0:29,0:29:75.24:0,75,1827	0/0:15,0:15:45.15:0,45,1165	0/0:24,0:24:60.21:0,60,1558	0/0:20,0:20:52.99:0,53,1218	0/0:17,0:17:42.10:0,42,849	0/0:19,0:19:57.18:0,57,1254	0/0:9,0:9:24.04:0,24,531	0/0:14,0:14:39.13:0,39,945	0/0:15,0:15:36.12:0,36,934	0/0:29,0:29:80.99:0,81,1980	0/0:26,0:26:75.24:0,75,1839	0/0:26,0:26:78.27:0,78,1962	0/0:25,0:25:69.24:0,69,1785	0/0:11,0:11:30.10:0,30,736
chr10	89830536	.	GC	G	12046.44	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=11.269;DP=751;FS=0.867;HRun=2;HaplotypeScore=113.2886;InbreedingCoeff=0.9999;MQ=80.29;MQ0=0;MQRankSum=-2.566;QD=34.13;ReadPosRankSum=5.210;VQSLOD=4.4276;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,1958	0/0:12,0:12:36.12:0,36,537	0/0:19,0:17:48.09:0,48,648	0/0:23,0:21:33.68:0,34,549	1/1:1,27:28:81.23:1019,81,0	0/0:33,0:33:99:0,99,1424	0/0:21,0:21:63.19:0,63,901	0/0:34,0:34:93.21:0,93,1328	1/1:0,38:38:99:1284,99,0	1/1:0,31:31:93.28:1190,93,0	1/1:1,23:24:60.19:773,60,0	1/1:0,30:30:81.26:1051,81,0	1/1:1,16:17:42.14:545,42,0	1/1:0,22:22:66.21:856,66,0	0/0:33,0:33:99:0,99,1442	1/1:0,29:29:60.20:778,60,0	0/0:27,0:27:81.25:0,81,1174	1/1:0,25:25:72.23:934,72,0	0/0:19,0:19:57.17:0,57,801	0/0:28,0:28:78.25:0,78,1146	0/0:27,0:27:81.20:0,81,1146	1/1:0,30:30:84.23:1070,84,0	1/1:0,28:28:69.17:874,69,0	1/1:1,32:33:87.28:1128,87,0	1/1:0,18:18:42.14:544,42,0	0/0:31,0:31:93.28:0,93,1317	0/0:29,0:29:84.09:0,84,1217	0/0:16,0:16:45.07:0,45,570
chr10	89832123	.	TGCTGAAGGGGA	T	14704.35	PASS	AB=0.960;AC=27;AF=0.482;AN=56;BaseQRankSum=15.389;DP=540;FS=0.750;HRun=0;HaplotypeScore=187.4980;InbreedingCoeff=0.9209;MQ=79.00;MQ0=0;MQRankSum=-15.840;QD=69.69;ReadPosRankSum=3.724;VQSLOD=4.5512;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,6739	0/0:7,0:7:21.07:0,21,1131	0/0:24,0:24:66.16:0,66,2638	0/0:20,0:20:43.16:0,43,2155	1/1:1,19:20:33.11:1099,33,0	0/0:24,0:24:72.25:0,72,3799	0/0:28,0:28:84.29:0,84,4737	0/0:27,0:27:78.26:0,78,3882	1/1:3,8:12:27.09:962,27,0	1/1:1,18:19:54.19:1802,54,0	1/1:2,9:11:21.07:749,21,0	1/1:2,18:20:51.18:1819,51,0	1/1:1,14:15:42.14:1498,42,0	1/1:4,7:11:15.05:535,15,0	0/0:20,0:20:57.18:0,57,2936	1/1:2,8:10:21.07:749,21,0	0/0:37,0:37:99:0,111,6189	1/1:2,8:10:15.05:530,15,0	0/0:19,0:19:57.20:0,57,2912	0/0:8,0:8:24.08:0,24,1301	0/0:35,0:35:99:0,105,5788	1/1:0,15:15:42.14:1498,42,0	1/1:0,11:11:24.08:856,24,0	1/1:2,11:13:21.07:749,21,0	1/1:0,20:20:51.18:1819,51,0	0/1:23,1:24:37.83:38,0,3442	0/0:30,0:30:90.31:0,90,5166	0/0:8,0:8:24.08:0,24,1385
chr10	89832293	.	AGAGG	A	713.11	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=4.246;DP=542;FS=2.740;HRun=0;HaplotypeScore=93.1127;InbreedingCoeff=0.3766;MQ=52.40;MQ0=35;MQRankSum=-3.985;QD=5.21;ReadPosRankSum=0.544;VQSLOD=2.0774;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:17:13.78:0,14,194	1/1:7,0:7:17.99:167,18,0	0/0:29,0:6:1.91:0,2,59	0/0:34,0:12:23.44:0,23,190	0/0:23,0:22:43.02:0,43,385	0/1:23,0:19:12.82:13,0,124	0/0:25,0:23:15.37:0,15,247	0/0:25,0:24:25.28:0,25,342	0/0:22,0:22:47.83:0,48,497	0/1:18,0:18:6.87:7,0,260	0/0:12,0:11:21:0,21,186	0/0:9,0:8:20.67:0,21,214	0/0:10,0:10:25.68:0,26,256	0/1:11,0:9:16.77:17,0,172	1/1:1,18:19:6.02:89,6,0	0/0:18,0:18:34.86:0,35,376	1/1:16,5:21:41.66:560,42,0	0/0:20,0:18:7.77:0,8,495	0/0:17,0:16:32.30:0,32,280	0/0:17,0:15:2.35:0,2,146	0/0:17,0:12:20.93:0,21,171	0/0:20,0:18:35.96:0,36,356	0/0:15,0:13:38.89:0,39,324	0/0:36,0:34:39.40:0,39,455	0/0:15,0:14:23.87:0,24,186	0/0:22,0:21:39.38:0,39,329	0/1:24,0:23:8.85:9,0,200	0/1:14,0:12:3.41:3,0,172
chr10	89832297	.	GGAGAGAGAGAGAGAGAGA	G	2480.08	PASS	AB=0.800;AC=15;AF=0.300;AN=50;BaseQRankSum=5.343;DP=539;FS=0.849;HRun=0;HaplotypeScore=185.0869;InbreedingCoeff=0.6578;MQ=51.61;MQ0=37;MQRankSum=-3.732;QD=16.10;ReadPosRankSum=1.665;VQSLOD=2.7741;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,5:17:4.25:139,4,0	0/0:6,0:6:12.04:0,12,551	./.	./.	0/0:26,0:25:29.02:0,29,1660	1/1:10,11:18:15.05:673,15,0	1/1:17,6:21:1.83:174,2,0	0/0:23,0:21:2.60:0,3,10	0/0:16,0:21:18.06:0,18,1214	0/0:18,0:17:22.63:0,23,1117	0/0:12,0:11:6.02:0,6,317	0/0:8,0:11:21.07:0,21,1341	0/0:9,0:10:15.05:0,15,815	0/0:11,0:11:15.05:0,15,929	0/0:19,0:19:6.02:0,6,298	0/0:16,0:17:29.96:0,30,1742	0/0:20,0:20:39.13:0,39,1868	0/0:20,0:19:36.89:0,37,1977	1/1:13,2:14:5.97:192,6,0	1/1:12,5:15:6.02:292,6,0	./.	0/0:20,0:18:24.08:0,24,1317	0/0:16,0:15:24.08:0,24,1105	0/0:20,0:37:27.09:0,27,1638	0/0:14,0:13:6.01:0,6,65	0/1:15,5:19:82.72:323,0,83	1/1:14,9:23:14.95:703,15,0	1/1:11,3:12:3.01:146,3,0
chr10	89833911	.	TA	T	3005.83	PASS	AB=0.846;AC=23;AF=0.411;AN=56;BaseQRankSum=10.737;DP=478;FS=7.786;HRun=12;HaplotypeScore=46.8197;InbreedingCoeff=0.8427;MQ=65.33;MQ0=2;MQRankSum=-0.942;QD=14.81;ReadPosRankSum=-1.520;VQSLOD=3.4881;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:47.82:371,48,0	0/0:8,1:9:0.80:0,1,184	1/1:12,1:7:5.20:29,5,0	0/0:11,0:5:3:0,3,26	0/0:27,2:29:43.84:0,44,659	1/1:3,10:13:29.88:232,30,0	1/1:2,12:14:35.86:279,36,0	1/1:9,27:36:77.64:596,78,0	0/0:11,0:11:30.04:0,30,297	0/0:26,1:27:27.86:0,28,464	0/0:36,0:39:98.96:0,99,961	0/0:18,0:18:45.03:0,45,431	0/1:9,2:11:19.41:19,0,186	0/0:18,0:19:44.86:0,45,431	0/0:19,0:19:48.07:0,48,477	0/0:13,0:13:13.78:0,14,268	0/0:22,1:23:39.89:0,40,586	0/0:13,0:13:36.07:0,36,365	1/1:8,14:22:41.15:305,41,0	1/1:4,18:23:55.66:411,56,0	1/1:0,5:5:14.94:116,15,0	0/0:4,0:4:12.02:0,12,122	0/0:16,0:16:27.05:0,27,274	0/0:11,0:11:27.04:0,27,268	0/0:12,0:12:30.03:0,30,292	1/1:2,16:18:47.69:362,48,0	1/1:1,12:14:29.74:223,30,0	1/1:2,13:15:35.85:279,36,0
chr10	89834555	.	TTTC	T	5804.01	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-4.659;DP=645;FS=27.839;HRun=0;HaplotypeScore=144.3244;InbreedingCoeff=0.9196;MQ=64.85;MQ0=9;MQRankSum=-11.932;QD=23.98;ReadPosRankSum=-4.069;VQSLOD=2.0597;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,6:20:45.32:489,45,0	0/0:17,0:15:18.46:0,18,286	0/0:33,0:20:45.28:0,45,495	0/0:36,0:11:19.40:0,19,172	0/0:32,0:32:87.13:0,87,964	1/1:12,11:21:53.98:659,54,0	1/1:6,6:9:20.88:242,21,0	1/1:19,12:29:64:713,64,0	0/0:14,0:14:38.51:0,39,377	0/0:36,0:36:94.59:0,95,960	0/0:32,0:32:94.77:0,95,1019	0/0:18,0:18:50.14:0,50,553	0/0:29,0:29:82.64:0,83,876	0/0:15,0:15:41.90:0,42,455	0/1:23,0:23:18.76:19,0,348	0/0:11,0:11:30.49:0,30,318	0/0:21,0:20:29.68:0,30,338	0/0:26,0:26:75.52:0,76,813	1/1:14,6:19:50.95:517,51,0	1/1:14,13:27:58.24:857,58,0	1/1:5,2:7:14.96:164,15,0	0/0:14,0:14:37.16:0,37,371	0/0:21,0:21:59.86:0,60,600	0/0:31,0:31:67.55:0,68,817	0/0:17,0:17:51.07:0,51,548	1/1:19,16:34:68.08:1001,68,0	1/1:20,10:29:77.32:817,77,0	1/1:9,3:12:32.81:327,33,0
chr10	89834556	.	TTC	T	4142.96	PASS	AB=0.974;AC=22;AF=0.393;AN=56;BaseQRankSum=3.496;DP=642;FS=34.264;HRun=0;HaplotypeScore=138.6608;InbreedingCoeff=0.8601;MQ=65.03;MQ0=9;MQRankSum=-10.272;QD=16.12;ReadPosRankSum=-3.612;VQSLOD=1.5663;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:20:50.37:357,50,0	0/1:17,1:16:6.36:6,0,191	0/0:33,0:20:49.61:0,50,467	0/0:36,0:11:21.96:0,22,177	0/0:32,0:32:87.19:0,87,742	1/1:20,2:20:57.39:467,57,0	1/1:12,0:9:20.89:159,21,0	1/1:29,1:28:65.29:493,65,0	0/0:14,0:14:38.69:0,39,289	0/0:37,0:37:96.89:0,97,769	0/0:32,0:32:94.26:0,94,736	0/0:18,0:18:50.65:0,51,408	0/0:29,0:29:83.37:0,83,652	0/0:14,0:14:31.84:0,32,335	0/1:24,0:24:45.18:45,0,239	0/0:11,0:11:32.41:0,32,249	0/0:20,0:19:29.32:0,29,242	0/0:26,0:26:75.41:0,75,600	1/1:19,1:19:50.74:397,51,0	1/1:25,1:26:71.55:551,72,0	1/1:6,1:7:14.89:107,15,0	0/0:14,0:14:38.34:0,38,289	0/0:21,0:21:60.82:0,61,467	0/0:31,0:31:67.81:0,68,631	0/0:17,0:17:50.84:0,51,403	1/1:34,1:34:62.29:695,62,0	1/1:26,3:28:77.10:596,77,0	1/1:12,0:12:32.86:268,33,0
chr10	89834557	.	TC	T	3587.60	PASS	AB=0.962;AC=22;AF=0.393;AN=56;BaseQRankSum=5.812;DP=633;FS=22.904;HRun=1;HaplotypeScore=129.3277;InbreedingCoeff=0.8460;MQ=65.07;MQ0=9;MQRankSum=-10.422;QD=14.12;ReadPosRankSum=-3.712;VQSLOD=1.1244;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,2:20:49.02:314,49,0	0/1:19,0:17:25.62:26,0,109	0/0:33,0:20:49.94:0,50,384	0/0:36,0:11:21.03:0,21,160	0/0:32,0:32:85.22:0,85,843	1/1:20,2:20:59.11:405,59,0	1/1:12,0:9:20.60:130,21,0	1/1:27,2:28:63.91:401,64,0	0/0:12,0:12:36.03:0,36,354	0/0:34,0:35:94.98:0,95,929	0/0:31,0:32:95.58:0,96,911	0/0:18,0:18:51.04:0,51,515	0/0:27,0:29:81.48:0,81,793	0/0:14,0:14:40.99:0,41,389	0/1:22,2:24:99:123,0,111	0/0:11,0:11:30.88:0,31,295	0/0:19,0:18:21.17:0,21,134	0/0:25,0:25:70.76:0,71,740	1/1:20,0:19:50.09:334,50,0	1/1:22,3:25:73.81:482,74,0	1/1:6,0:6:14.71:92,15,0	0/0:14,0:14:36.74:0,37,327	0/0:21,0:21:61.76:0,62,567	0/0:31,0:31:63.96:0,64,736	0/0:17,0:17:50.98:0,51,503	1/1:34,1:34:63.49:588,63,0	1/1:25,3:27:78.34:485,78,0	1/1:10,1:11:32.29:207,32,0
chr10	89834593	.	ACCGAAC	A	8551.02	PASS	AC=22;AF=0.407;AN=54;BaseQRankSum=6.542;DP=514;FS=50.907;HRun=0;HaplotypeScore=131.9792;InbreedingCoeff=0.9458;MQ=48.85;MQ0=9;MQRankSum=-15.139;QD=48.86;ReadPosRankSum=-1.407;VQSLOD=2.7263;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:11:21.07:486,21,0	0/0:13,0:12:23.95:0,24,864	1/1:9,0:2:2.50:9,2,0	./.	0/0:27,0:27:72.22:0,72,2409	1/1:4,15:19:45.15:1073,45,0	1/1:3,15:14:27.08:599,27,0	1/1:6,19:21:51.18:1225,51,0	0/0:11,0:11:30.10:0,30,1081	0/0:22,0:22:66.23:0,66,2357	0/0:19,0:19:54.19:0,54,1893	0/0:19,0:19:54.19:0,54,1944	0/0:17,0:17:45.15:0,45,1620	0/0:21,0:21:63.22:0,63,2211	0/0:15,0:15:45.11:0,45,1533	0/0:14,0:14:42.14:0,42,1514	0/0:17,0:17:42.14:0,42,1482	0/0:29,0:29:87.30:0,87,3133	1/1:2,11:13:30.10:693,30,0	1/1:4,7:11:24.08:577,24,0	1/1:1,4:5:2.93:72,3,0	0/0:18,0:18:45.15:0,45,1598	0/0:21,0:21:63.22:0,63,2269	0/0:27,0:27:75.26:0,75,2603	0/0:30,0:30:87.30:0,87,3129	1/1:2,28:29:81.28:1946,81,0	1/1:3,21:24:57.20:1366,57,0	1/1:1,7:8:21.07:504,21,0
chr10	89834659	.	C	CCGGTCTGTTTT	17722.10	PASS	AC=18;AF=0.333;AN=54;BaseQRankSum=-3.774;DP=664;FS=2.722;HRun=0;HaplotypeScore=211.0337;InbreedingCoeff=0.9957;MQ=64.42;MQ0=0;MQRankSum=-14.518;QD=72.93;ReadPosRankSum=-5.674;VQSLOD=3.4331;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:20,9:28:51.16:2084,51,0	0/0:8,0:8:18.06:0,18,605	0/0:24,0:24:53.99:0,54,1358	0/0:17,0:13:30.10:0,30,834	0/0:28,0:28:75.26:0,75,2356	1/1:12,12:22:42.14:2179,42,0	1/1:19,6:25:60.17:2198,60,0	1/1:19,5:23:27.09:960,27,0	0/0:22,0:22:60.19:0,60,1859	0/0:29,0:29:72.20:0,72,2269	0/0:12,0:12:27.07:0,27,709	0/0:27,0:27:72.25:0,72,2200	0/0:25,0:25:63.22:0,63,2116	0/0:29,0:29:81.26:0,81,2555	0/0:28,0:28:81.26:0,81,2566	0/0:21,0:21:54.16:0,54,1688	0/0:27,0:27:66.19:0,66,1968	0/0:34,0:34:87.28:0,87,2788	1/1:23,8:30:45.15:1999,45,0	1/1:10,10:20:39.13:1822,39,0	1/1:10,1:11:15.05:333,15,0	0/0:19,0:19:45.15:0,45,1356	0/0:15,0:15:36.11:0,36,1107	0/0:27,0:27:69.24:0,69,2306	0/0:26,0:26:63.17:0,63,1979	1/1:26,13:39:66.22:3211,66,0	1/1:26,12:37:66.23:2937,66,0	./.
chr10	89835198	.	TCACA	T	16119.08	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.583;DP=879;FS=0.000;HRun=0;HaplotypeScore=277.4229;InbreedingCoeff=0.8792;MQ=54.37;MQ0=11;MQRankSum=0.805;QD=21.32;ReadPosRankSum=8.748;VQSLOD=3.6164;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,37:56:72.51:1222,73,0	1/1:3,14:17:24.04:376,24,0	0/0:59,0:32:57.37:0,57,846	0/0:63,0:33:66.14:0,66,1359	1/1:2,23:26:11.97:204,12,0	1/1:4,17:21:21.54:358,22,0	1/1:9,30:41:29.79:477,30,0	1/1:13,23:35:66.16:997,66,0	1/1:4,22:27:45.08:729,45,0	1/1:5,14:19:42.10:677,42,0	1/1:1,15:16:6.02:102,6,0	1/1:6,32:38:47.84:694,48,0	1/1:4,21:25:33.11:559,33,0	1/1:9,28:37:27.03:457,27,0	1/1:3,26:29:54.18:916,54,0	1/1:2,18:20:29.78:477,30,0	1/1:4,23:27:46.50:955,47,0	1/1:6,10:16:21.10:370,21,0	1/1:6,13:19:39.04:580,39,0	1/1:11,24:35:47.34:797,47,0	1/1:13,53:67:90.48:1669,90,0	1/1:8,15:24:12.17:204,12,0	1/1:2,20:22:11.20:202,11,0	1/1:7,28:35:15.39:257,15,0	1/1:6,17:23:12.03:166,12,0	1/1:5,36:41:93.63:1486,94,0	1/1:6,19:25:45.58:733,46,0	1/1:1,12:13:27.09:458,27,0
chr10	89836053	.	TAA	T	815.94	PASS	AB=0.984;AC=27;AF=0.482;AN=56;BaseQRankSum=-0.657;DP=365;FS=29.111;HRun=9;HaplotypeScore=121.4933;InbreedingCoeff=-0.1570;MQ=46.32;MQ0=11;MQRankSum=3.565;QD=2.65;ReadPosRankSum=3.322;VQSLOD=-0.4198;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:21.23:52,0,21	0/1:13,0:13:7.71:8,0,8	0/0:16,0:4:2.94:0,3,18	0/0:11,0:2:0:0,0,0	0/1:28,0:27:40.18:65,0,40	1/1:21,0:20:4.03:31,4,0	1/1:3,0:3:2.84:15,3,0	1/1:27,0:27:11.81:242,12,0	1/1:2,1:3:3.01:33,3,0	0/1:23,0:23:7.73:8,0,89	0/1:16,1:17:54.39:58,0,54	0/0:10,0:10:0.09:0,0,50	0/1:7,0:6:17.64:21,0,18	0/0:3,0:3:5.67:0,6,28	0/1:10,0:10:6.38:18,0,6	0/0:8,0:8:10.18:0,10,53	1/1:26,0:26:4.35:64,4,0	0/1:13,0:13:4.13:4,0,31	0/1:14,0:14:0.85:107,0,1	0/1:12,0:12:5.18:26,0,5	0/0:3,0:3:4.41:0,4,14	0/0:6,0:6:2.61:0,3,14	0/1:7,2:9:2.65:82,0,3	0/1:4,0:4:7.23:7,0,22	0/1:23,0:23:24.55:25,0,67	0/1:17,0:17:21.20:30,0,21	0/1:12,0:12:6.73:7,0,7	1/1:5,0:5:5.20:58,5,0
chr10	89836059	.	A	AAT	6788.87	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-3.842;DP=352;FS=18.452;HRun=0;HaplotypeScore=100.8163;InbreedingCoeff=0.0849;MQ=49.26;MQ0=11;MQRankSum=5.099;QD=20.03;ReadPosRankSum=4.125;VQSLOD=3.4468;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,16:20:18.32:621,18,0	1/1:11,0:11:12.94:207,13,0	1/1:16,0:3:2.45:7,2,0	0/0:10,0:1:0:0,0,0	1/1:25,0:24:14.32:181,14,0	1/1:0,20:20:39.13:684,39,0	1/1:1,2:3:6.02:103,6,0	1/1:3,29:32:82.91:1123,83,0	0/1:3,0:3:10.12:34,0,10	0/1:19,0:19:4.02:110,0,4	0/1:15,0:15:14.31:81,0,14	0/1:7,0:7:10.58:12,0,11	1/1:7,0:6:3:35,3,0	0/0:3,0:3:5.41:0,5,15	1/1:10,0:10:23.76:225,24,0	0/1:8,0:8:2.71:22,0,3	1/1:26,0:26:51:461,51,0	1/1:13,0:13:10.91:67,11,0	1/1:3,12:15:31.16:587,31,0	1/1:2,10:12:23.48:297,23,0	1/1:2,1:3:6:76,6,0	0/1:6,0:6:3.04:38,0,3	1/1:8,0:8:12.07:106,12,0	0/1:4,0:4:2.85:24,0,3	1/1:19,0:19:5.20:122,5,0	1/1:2,18:20:54.76:890,55,0	1/1:0,12:12:30.10:526,30,0	1/1:0,4:4:9.03:152,9,0
chr10	89836060	.	A	AT	3472.09	PASS	AB=1.000;AC=47;AF=0.870;AN=54;BaseQRankSum=2.291;DP=338;FS=4.112;HRun=0;HaplotypeScore=103.1729;InbreedingCoeff=-0.0164;MQ=49.51;MQ0=11;MQRankSum=1.419;QD=10.68;ReadPosRankSum=6.329;VQSLOD=3.5988;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:30.02:123,0,30	1/1:0,9:11:9.67:337,10,0	1/1:16,0:3:5.16:30,5,0	./.	1/1:22,0:21:33.90:200,34,0	1/1:19,0:18:36.09:169,36,0	1/1:2,1:3:5.78:35,6,0	0/1:31,0:31:55.36:224,0,55	0/1:3,0:3:7.69:16,0,8	1/1:18,0:18:18.14:142,18,0	1/1:14,1:15:5.39:83,5,0	1/1:7,0:7:3.30:25,3,0	1/1:7,0:6:9.74:51,10,0	0/0:3,0:3:1.83:0,2,4	1/1:1,10:11:26.83:357,27,0	1/1:8,0:8:9.75:51,10,0	1/1:1,25:26:52.83:702,53,0	1/1:13,0:13:24.38:114,24,0	1/1:15,0:15:2.50:101,2,0	0/1:10,0:10:34.70:67,0,35	0/1:2,0:2:7.29:7,0,9	1/1:5,0:5:2.55:21,3,0	1/1:8,0:8:16.02:116,16,0	1/1:3,0:3:0.46:12,0,0	1/1:18,0:18:22.14:164,22,0	1/1:19,0:19:17.19:159,17,0	1/1:12,0:12:28.06:133,28,0	1/1:4,0:4:7.76:31,8,0
chr10	89837832	.	G	GT	2545.05	PASS	AB=0.790;AC=29;AF=0.518;AN=56;BaseQRankSum=1.065;DP=559;FS=3.107;HRun=15;HaplotypeScore=85.7125;InbreedingCoeff=0.0169;MQ=60.12;MQ0=18;MQRankSum=1.084;QD=5.88;ReadPosRankSum=0.819;VQSLOD=2.9611;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:70.76:381,71,0	1/1:7,0:7:10.98:49,11,0	0/1:43,1:16:2.98:3,0,34	0/1:30,0:13:11.95:12,0,28	1/1:10,8:21:4.77:189,5,0	0/1:14,2:19:8.97:9,0,116	0/0:10,0:14:2.33:0,2,86	0/1:22,4:26:71.54:72,0,112	0/1:16,6:22:6.67:175,0,7	0/1:11,9:21:54.22:128,0,54	0/1:5,8:12:9.34:128,0,9	0/1:12,6:18:50.71:160,0,51	0/1:7,5:12:24.01:26,0,24	1/1:12,4:15:5.18:157,5,0	1/1:23,0:22:35.59:159,36,0	1/1:13,4:18:13.66:210,14,0	1/1:22,0:22:38.99:163,39,0	1/1:9,11:20:4.58:313,5,0	0/0:21,0:22:7.51:0,8,144	0/0:19,0:18:34.30:0,34,202	0/0:12,0:12:15.91:0,16,87	0/1:8,2:11:30.27:76,0,30	0/1:8,1:8:5.93:54,0,6	0/1:13,14:26:45.98:181,0,46	0/1:5,7:13:34.29:76,0,34	0/0:21,0:25:25.13:0,25,176	0/0:25,2:27:9.51:0,10,244	0/0:1,0:2:4.98:0,5,24
chr10	89837834	.	T	TTG	1603.04	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-1.929;DP=557;FS=0.000;HRun=0;HaplotypeScore=100.6796;InbreedingCoeff=0.8652;MQ=59.65;MQ0=20;MQRankSum=-0.323;QD=18.22;ReadPosRankSum=3.897;VQSLOD=3.8565;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:33,2:35:51.30:415,51,0	1/1:3,7:9:11.95:158,12,0	0/0:46,0:16:27.94:0,28,246	0/0:30,0:12:3.15:0,3,158	0/0:19,0:19:34.23:0,34,333	0/0:20,0:20:42.49:0,42,525	0/0:15,0:15:31.69:0,32,366	0/0:28,0:26:49.88:0,50,636	0/0:19,0:19:52.55:0,53,421	0/0:23,0:23:47.73:0,48,488	0/0:15,0:13:5.52:0,6,147	0/0:18,0:18:47.34:0,47,409	0/0:11,0:11:7.97:0,8,168	0/0:16,0:15:20.84:0,21,268	1/1:4,18:21:38.92:522,39,0	0/0:18,0:18:37.67:0,38,336	1/1:4,16:21:35.62:663,36,0	0/0:21,0:20:37.98:0,38,363	0/0:22,0:22:39.70:0,40,622	0/0:19,0:17:48.08:0,48,620	0/0:11,0:10:26.05:0,26,317	0/0:11,0:11:31.53:0,32,290	0/0:9,0:8:12.92:0,13,166	0/0:28,0:27:55.85:0,56,480	0/0:14,0:14:28.62:0,29,253	0/0:24,0:23:58.66:0,59,757	0/0:30,0:28:80.94:0,81,991	0/0:2,0:2:6.02:0,6,77
chr10	89837835	.	T	TG	1209.67	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=0.705;DP=554;FS=0.000;HRun=0;HaplotypeScore=85.0255;InbreedingCoeff=0.8972;MQ=59.80;MQ0=20;MQRankSum=1.423;QD=13.59;ReadPosRankSum=4.255;VQSLOD=4.8348;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,30:36:59.43:880,59,0	1/1:10,0:9:4.38:44,4,0	0/0:46,0:16:30.17:0,30,235	0/0:29,0:12:11.52:0,12,157	0/0:20,0:20:22.07:0,22,223	0/0:20,0:20:52.77:0,53,542	0/0:14,0:14:34.84:0,35,349	0/0:27,0:25:52.33:0,52,578	0/0:19,0:19:25.11:0,25,281	0/0:23,0:23:47.44:0,47,432	0/0:15,0:13:8.96:0,9,119	0/0:18,0:18:19.38:0,19,281	0/0:11,0:11:18.97:0,19,170	0/0:16,0:15:24.68:0,25,194	1/1:20,2:21:35.02:219,35,0	0/0:18,0:18:28.32:0,28,237	1/1:21,0:21:26.27:218,26,0	0/0:21,0:20:20.14:0,20,175	0/0:21,0:21:59.05:0,59,644	0/0:18,0:17:48.08:0,48,579	0/0:11,0:10:26.66:0,27,293	0/0:11,0:11:26.30:0,26,234	0/0:8,1:8:19.59:0,20,159	0/0:28,0:27:32.75:0,33,330	0/0:14,0:14:23.42:0,23,224	0/0:24,0:23:69.03:0,69,726	0/0:30,0:28:76.88:0,77,878	0/0:2,0:2:6.01:0,6,68
chr10	89841485	.	G	GA	1255.33	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.357;DP=703;FS=0.573;HRun=8;HaplotypeScore=66.4582;InbreedingCoeff=0.8523;MQ=81.81;MQ0=0;MQRankSum=-4.588;QD=28.53;ReadPosRankSum=0.327;VQSLOD=3.9675;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,38:44:99:1350,120,0	0/0:9,0:9:24.01:0,24,220	0/0:20,0:20:30.58:0,31,294	0/0:16,1:18:3.19:0,3,269	0/0:41,0:41:99:0,102,933	0/0:26,0:26:66.02:0,66,604	0/0:33,0:33:84.03:0,84,769	0/0:30,0:30:77.99:0,78,706	0/0:23,0:23:63.03:0,63,577	0/0:28,0:28:78.04:0,78,714	0/0:19,0:19:45.01:0,45,412	0/0:19,0:19:54.03:0,54,494	0/0:19,0:19:48.02:0,48,439	0/0:27,0:27:72.04:0,72,659	0/0:33,0:33:81.02:0,81,741	0/0:22,0:22:57.03:0,57,522	0/0:30,0:30:75.01:0,75,682	0/0:22,0:22:63.03:0,63,577	0/0:21,0:21:51.02:0,51,467	0/0:18,0:18:51.02:0,51,467	0/0:15,0:15:35.99:0,36,324	0/0:26,0:26:69.03:0,69,632	0/0:23,0:23:60.02:0,60,545	0/0:23,0:23:69.02:0,69,626	0/0:22,0:22:66.02:0,66,599	0/0:31,0:31:81.03:0,81,741	0/0:37,0:36:98.99:0,99,893	0/0:22,1:23:34.42:0,34,569
chr10	89842658	.	C	CT	1478.67	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.189;DP=700;FS=6.373;HRun=1;HaplotypeScore=69.5153;InbreedingCoeff=0.9916;MQ=85.50;MQ0=0;MQRankSum=-3.057;QD=35.21;ReadPosRankSum=2.183;VQSLOD=3.6892;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,41:42:99:1574,105,0	0/0:7,0:7:21.07:0,21,273	0/0:35,0:35:81.40:0,81,1172	0/0:23,0:23:63.17:0,63,778	0/0:19,0:19:54.16:0,54,685	0/0:16,0:16:45.15:0,45,584	0/0:23,0:23:66.21:0,66,855	0/0:25,0:25:75.24:0,75,972	0/0:22,0:22:66.20:0,66,843	0/0:34,0:34:93.29:0,93,1184	0/0:12,0:12:33.11:0,33,429	0/0:30,0:30:90.28:0,90,1154	0/0:32,0:32:96.31:0,96,1245	0/0:19,0:19:51.17:0,51,662	0/0:32,0:32:90.28:0,90,1153	0/0:23,0:23:69.22:0,69,895	0/0:27,0:27:75.24:0,75,973	0/0:43,0:43:99:0,129,1628	0/0:11,0:11:21.07:0,21,272	0/0:17,0:17:48.16:0,48,623	0/0:45,0:45:99:0,129,1628	0/0:27,0:27:78.22:0,78,981	0/0:17,0:17:51.15:0,51,646	0/0:31,0:31:90.29:0,90,1169	0/0:21,0:21:54.17:0,54,700	0/0:29,0:29:87.28:0,87,1129	0/0:23,0:23:66.21:0,66,856	0/0:15,0:15:36.12:0,36,467
chr10	89842814	.	CGTGT	C	7348.28	PASS	AB=0.788;AC=45;AF=0.833;AN=54;BaseQRankSum=0.251;DP=649;FS=5.450;HRun=0;HaplotypeScore=140.1414;InbreedingCoeff=0.4894;MQ=63.50;MQ0=6;MQRankSum=-1.458;QD=13.56;ReadPosRankSum=-0.293;VQSLOD=4.3721;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:49:71.93:0,72,1210	1/1:0,7:8:14.94:209,15,0	0/1:30,0:18:2.36:2,0,35	0/0:26,0:13:3:0,3,26	1/1:7,2:10:9.02:125,9,0	1/1:8,0:17:18.01:163,18,0	0/1:21,0:38:1.11:167,0,1	0/0:12,0:20:4.12:0,4,31	1/1:5,26:33:39.12:589,39,0	1/1:10,12:24:24:444,24,0	1/1:3,2:7:11.97:146,12,0	1/1:11,11:28:8.38:505,8,0	1/1:8,10:22:37.34:501,37,0	1/1:7,12:21:21.06:317,21,0	1/1:9,19:28:39.13:630,39,0	1/1:5,15:21:33.11:512,33,0	1/1:9,17:29:10.55:417,11,0	1/1:6,13:21:15.52:426,16,0	./.	1/1:4,0:14:11.97:102,12,0	1/1:33,0:47:3:27,3,0	1/1:3,16:19:15.05:243,15,0	1/1:9,5:15:8.35:124,8,0	1/1:9,29:40:54.18:872,54,0	1/1:4,8:12:17.61:254,18,0	0/1:16,0:31:19.14:296,0,19	1/1:8,0:21:26.13:237,26,0	1/1:5,0:4:6.93:41,7,0
chr10	89844318	.	TGA	T	3568.95	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=1.494;DP=580;FS=4.266;HRun=0;HaplotypeScore=69.9466;InbreedingCoeff=0.8441;MQ=64.26;MQ0=10;MQRankSum=1.704;QD=13.89;ReadPosRankSum=2.127;VQSLOD=2.9728;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:35:21:0,21,182	0/0:0,0:10:20.88:0,21,163	0/0:52,1:21:0.37:0,0,395	0/0:43,1:15:32.31:0,32,341	1/1:10,14:23:36.10:436,36,0	0/0:15,0:15:27.08:0,27,421	0/0:16,0:16:30.10:0,30,491	0/0:29,0:28:54.62:0,55,829	1/1:5,3:7:3.01:37,3,0	1/1:7,19:26:54.17:673,54,0	1/1:3,13:16:36.11:441,36,0	1/1:17,3:20:33.10:410,33,0	1/1:3,14:17:9.03:112,9,0	1/1:1,16:17:15.05:187,15,0	0/0:5,0:23:14.91:0,15,131	1/1:6,9:15:12.04:150,12,0	0/0:6,0:19:23.42:0,23,179	1/1:2,13:15:12.04:149,12,0	0/0:19,0:18:39.05:0,39,610	0/0:19,0:19:48.16:0,48,771	0/0:9,0:9:9.03:0,9,148	1/1:4,12:16:30.09:374,30,0	1/1:9,10:19:5.69:74,6,0	1/1:4,17:20:14.83:187,15,0	1/1:3,18:21:27.09:338,27,0	0/1:22,0:19:1.37:1,0,508	0/0:26,0:26:69.21:0,69,1087	0/0:5,0:5:9.01:0,9,123
chr10	89844562	.	AAAAAC	A	16823.20	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.364;DP=626;FS=4.515;HRun=0;HaplotypeScore=119.6227;InbreedingCoeff=0.9300;MQ=61.17;MQ0=11;MQRankSum=3.336;QD=31.04;ReadPosRankSum=5.982;VQSLOD=4.0420;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,22:40:48.17:968,48,0	1/1:2,4:6:12.04:221,12,0	0/0:24,0:15:26.76:0,27,434	0/0:54,0:18:26.78:0,27,539	1/1:5,19:24:51.17:938,51,0	1/1:3,14:17:36.12:662,36,0	1/1:11,6:17:9.03:165,9,0	1/1:18,8:26:24.06:366,24,0	1/1:8,11:19:30.10:552,30,0	1/1:5,16:20:42.13:735,42,0	1/1:5,12:17:33.07:571,33,0	1/1:8,16:24:45.11:790,45,0	1/1:5,11:16:18.06:331,18,0	1/1:5,9:14:24.08:441,24,0	1/1:8,20:28:60.21:1103,60,0	1/1:13,16:29:48.16:883,48,0	1/1:15,21:35:23.85:907,24,0	1/1:5,13:18:39.13:717,39,0	1/1:7,4:11:12.01:186,12,0	1/1:10,24:34:72.17:1254,72,0	1/1:6,17:23:39.13:717,39,0	1/1:5,9:14:24.08:441,24,0	1/1:5,14:19:39.13:717,39,0	1/1:9,16:25:33.11:607,33,0	1/1:2,15:17:41.92:737,42,0	1/1:6,9:14:30.10:546,30,0	1/1:5,16:20:48.16:882,48,0	1/1:5,6:11:21.07:386,21,0
chr10	89844744	.	CT	C	125.95	PASS	AB=0.911;AC=13;AF=0.232;AN=56;BaseQRankSum=-2.827;DP=516;FS=5.652;HRun=17;HaplotypeScore=98.2716;InbreedingCoeff=0.0535;MQ=56.98;MQ0=18;MQRankSum=3.263;QD=0.61;ReadPosRankSum=3.328;VQSLOD=-0.5891;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:35,4:39:17.59:18,0,300	1/1:2,0:3:4.95:22,5,0	0/0:19,0:8:5.87:0,6,35	0/1:12,0:9:1.50:1,0,22	0/1:15,4:20:10.42:10,0,64	0/0:19,0:23:21.06:0,21,199	0/0:16,1:24:16.53:0,17,155	0/0:32,0:35:49.96:0,50,275	0/0:19,0:19:16.67:0,17,210	0/0:14,0:16:20.60:0,21,142	0/0:18,0:17:20.74:0,21,144	0/0:20,0:22:25.97:0,26,153	0/1:12,0:12:1.15:1,0,64	0/1:14,1:20:5.05:5,0,105	1/1:3,10:13:11.28:66,11,0	0/1:14,1:16:7.24:7,0,54	0/1:17,11:26:22.63:105,0,23	0/0:20,0:18:8.82:0,9,166	0/0:20,0:17:5.94:0,6,101	0/0:12,0:15:12.55:0,13,73	0/0:4,0:7:5.83:0,6,38	0/0:13,1:13:10.10:0,10,160	0/0:13,0:13:20.82:0,21,143	0/1:23,1:23:19.82:20,0,132	0/1:13,2:14:11.48:11,0,86	0/0:6,0:12:26.85:0,27,148	0/0:17,0:17:29.54:0,30,189	0/0:7,1:8:1.03:0,1,88
chr10	89845668	.	C	CCA	2117.29	PASS	AB=1.000;AC=46;AF=0.958;AN=48;BaseQRankSum=-1.568;DP=559;FS=0.000;HRun=0;HaplotypeScore=136.5784;InbreedingCoeff=0.1559;MQ=54.85;MQ0=4;MQRankSum=1.945;QD=4.57;ReadPosRankSum=-1.178;VQSLOD=2.6187;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,1:43:5.07:27,5,0	1/1:2,0:4:3:26,3,0	./.	./.	1/1:13,0:13:8.97:70,9,0	1/1:16,0:19:5.99:52,6,0	1/1:20,0:21:17.49:149,17,0	1/1:26,0:26:7.17:79,7,0	1/1:16,0:17:8.85:91,9,0	1/1:16,0:16:13.87:135,14,0	./.	1/1:21,0:19:10.23:92,10,0	1/1:21,0:20:26.45:203,26,0	1/1:10,0:11:4.66:30,5,0	1/1:12,9:26:20.72:238,21,0	1/1:24,0:25:18.74:170,19,0	1/1:18,4:32:21.49:222,21,0	0/1:19,0:19:0.69:3,0,1	1/1:14,0:14:3:26,3,0	0/1:12,0:12:0.24:0,0,0	1/1:34,0:33:17.11:152,17,0	./.	1/1:7,0:7:4.26:44,4,0	1/1:19,0:19:4.41:11,4,0	1/1:12,0:12:9.05:59,9,0	1/1:19,0:18:18.30:142,18,0	1/1:18,0:19:14.43:144,14,0	1/1:1,0:7:3:26,3,0
chr10	89848545	.	TG	T	1097.54	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.756;DP=670;FS=1.499;HRun=1;HaplotypeScore=65.2064;InbreedingCoeff=0.9992;MQ=81.12;MQ0=0;MQRankSum=-1.083;QD=33.26;ReadPosRankSum=2.116;VQSLOD=3.4806;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:87.25:1192,87,0	0/0:17,0:17:51.16:0,51,791	0/0:18,0:18:51.10:0,51,768	0/0:27,0:27:74.24:0,74,1075	0/0:30,0:30:87.28:0,87,1352	0/0:16,0:16:48.14:0,48,720	0/0:15,0:15:45.14:0,45,693	0/0:35,0:35:99:0,105,1594	0/0:31,0:31:93.29:0,93,1438	0/0:16,0:16:48.16:0,48,745	0/0:37,0:37:99:0,111,1767	0/0:23,0:23:69.21:0,69,1053	0/0:22,0:22:63.20:0,63,966	0/0:22,0:22:66.22:0,66,1049	0/0:24,0:24:72.23:0,72,1114	0/0:24,0:24:72.20:0,72,1077	0/0:23,0:23:69.06:0,69,969	0/0:11,0:11:33.06:0,33,498	0/0:20,0:20:60.18:0,60,899	0/0:31,0:31:93.30:0,93,1459	0/0:26,0:26:78.24:0,78,1199	0/0:26,0:26:78.26:0,78,1233	0/0:26,0:26:78.26:0,78,1232	0/0:20,0:20:60.19:0,60,933	0/0:38,0:38:99:0,111,1772	0/0:24,0:24:72.25:0,72,1144	0/0:25,0:25:75.24:0,75,1173	0/0:10,0:10:30.10:0,30,479
chr10	89849227	.	T	TA	4364.22	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-10.180;DP=516;FS=2.269;HRun=10;HaplotypeScore=53.0367;InbreedingCoeff=0.9375;MQ=58.31;MQ0=18;MQRankSum=-1.791;QD=20.11;ReadPosRankSum=-0.700;VQSLOD=5.3711;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,19:27:29.47:510,29,0	0/0:7,0:7:14.98:0,15,123	0/0:9,0:7:11.79:0,12,83	0/0:4,0:3:8.83:0,9,64	0/0:28,0:28:62.87:0,63,515	1/1:4,20:25:13.70:541,14,0	1/1:3,9:11:24.06:256,24,0	1/1:14,25:39:50.44:705,50,0	0/0:15,0:15:35.86:0,36,295	0/0:18,0:17:38.93:0,39,320	0/0:24,0:24:59.90:0,60,493	0/0:12,0:12:29.95:0,30,243	0/0:23,0:23:65.92:0,66,542	0/0:19,0:19:41.94:0,42,345	0/0:23,0:23:56.89:0,57,468	0/0:17,0:16:44.93:0,45,368	0/0:24,0:24:61.96:0,62,498	0/0:14,0:13:26.96:0,27,222	1/1:4,6:8:0.16:164,0,0	1/1:5,21:26:44.43:647,44,0	1/1:2,7:8:15.04:160,15,0	0/0:11,0:11:26.93:0,27,216	0/0:10,0:8:20:0,20,154	0/0:20,0:17:41.94:0,42,345	0/0:17,0:19:40.97:0,41,326	1/1:6,17:23:23.48:455,23,0	1/1:6,25:29:56.91:607,57,0	1/1:1,10:10:30.08:320,30,0
chr10	89849501	.	TA	T	5316.42	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.777;DP=618;FS=1.046;HRun=8;HaplotypeScore=60.3339;InbreedingCoeff=0.9946;MQ=63.17;MQ0=1;MQRankSum=-1.456;QD=24.39;ReadPosRankSum=-0.776;VQSLOD=5.2619;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:99:0,105,1258	0/0:11,0:11:27.08:0,27,326	0/0:11,0:11:25.76:0,26,244	0/0:11,0:10:15.04:0,15,171	0/0:30,0:30:84.24:0,84,993	1/1:0,21:21:57.09:550,57,0	1/1:2,11:13:30.05:290,30,0	1/1:6,23:29:65.99:610,66,0	0/0:26,1:27:43.21:0,43,788	0/0:31,0:31:90.28:0,90,1087	0/0:15,0:15:42.13:0,42,506	0/0:24,0:24:66.20:0,66,797	0/0:28,0:28:84.23:0,84,983	0/0:15,0:15:42.13:0,42,507	0/0:24,0:24:69.21:0,69,833	0/0:23,0:23:60.10:0,60,687	0/0:24,0:24:63.19:0,63,761	0/0:17,0:17:42.11:0,42,495	1/1:4,34:37:99:963,102,0	1/1:0,34:34:96.15:926,96,0	1/1:0,16:16:45.07:434,45,0	0/0:15,0:15:42.13:0,42,507	0/0:21,0:21:60.17:0,60,713	0/0:15,0:15:39.10:0,39,458	0/0:18,0:18:45.12:0,45,528	1/1:2,19:21:57.09:550,57,0	1/1:2,30:32:71.84:695,72,0	1/1:1,13:14:15.17:298,15,0
chr10	89850159	.	CT	C	3561.96	PASS	AB=0.912;AC=23;AF=0.411;AN=56;BaseQRankSum=8.371;DP=614;FS=3.761;HRun=12;HaplotypeScore=71.5088;InbreedingCoeff=0.7373;MQ=76.94;MQ0=0;MQRankSum=-1.022;QD=11.87;ReadPosRankSum=0.295;VQSLOD=3.5265;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,24:36:29.40:381,29,0	0/1:10,2:12:19.44:19,0,178	0/0:14,1:15:14.95:0,15,183	0/1:15,0:15:16.76:17,0,50	0/0:22,3:25:16.12:0,16,314	1/1:4,20:24:47.80:372,48,0	1/1:6,14:21:34.87:261,35,0	1/1:6,20:27:58.78:444,59,0	0/0:16,0:16:30.03:0,30,296	0/0:27,0:27:32.96:0,33,331	0/0:21,1:22:27.86:0,28,464	0/0:17,0:17:9.85:0,10,270	0/0:12,0:12:27.04:0,27,269	0/0:22,0:23:53.91:0,54,522	0/0:24,0:24:39.06:0,39,381	0/0:24,0:24:51.10:0,51,517	0/0:27,0:28:62.96:0,63,623	0/0:15,2:17:1.59:0,2,367	1/1:5,12:17:32.35:254,32,0	1/1:9,21:31:61.73:469,62,0	1/1:6,20:26:41.76:325,42,0	0/0:17,1:18:18.83:0,19,363	0/1:19,3:22:24.64:25,0,310	0/0:20,0:20:51.09:0,51,512	0/0:25,1:26:27.84:0,28,448	1/1:6,27:35:69.70:522,70,0	1/1:8,19:28:49.81:377,50,0	1/1:2,3:6:13.96:96,14,0
chr10	89851522	.	AC	A	12605.53	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=14.444;DP=688;FS=5.801;HRun=4;HaplotypeScore=71.3557;InbreedingCoeff=0.9749;MQ=79.99;MQ0=1;MQRankSum=-4.313;QD=33.09;ReadPosRankSum=5.771;VQSLOD=5.1520;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:90.13:0,90,1196	1/1:0,7:7:21.06:252,21,0	0/0:27,0:26:72.16:0,72,947	0/0:21,0:22:52.70:0,53,754	1/1:1,31:32:93.15:1094,93,0	0/0:22,0:22:60.20:0,60,839	0/0:34,0:34:99:0,102,1355	0/0:30,0:30:81.26:0,81,1116	1/1:2,19:21:51.16:612,51,0	1/1:1,26:27:81.25:969,81,0	1/1:1,10:11:27.08:324,27,0	1/1:0,29:29:81.25:972,81,0	1/1:0,26:26:72.18:847,72,0	1/1:0,38:38:99:1296,108,0	1/1:0,31:31:84.26:1008,84,0	1/1:1,30:31:75.18:900,75,0	1/1:0,29:29:84.26:1008,84,0	1/1:0,13:13:39.12:468,39,0	0/0:18,0:18:42.12:0,42,567	0/0:20,0:20:57.18:0,57,780	0/0:42,0:42:99:0,123,1667	1/1:2,14:16:39.12:461,39,0	1/1:1,28:29:84.22:992,84,0	1/1:0,20:20:57.17:684,57,0	1/1:0,21:21:60.18:720,60,0	0/0:32,0:32:93.31:0,93,1302	0/0:24,0:24:72.20:0,72,954	0/0:1,0:1:3.01:0,3,42
chr10	89852962	.	TATATG	T	16887.65	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-4.376;DP=896;FS=5.796;HRun=0;HaplotypeScore=214.8184;InbreedingCoeff=0.9001;MQ=70.89;MQ0=7;MQRankSum=-1.883;QD=23.46;ReadPosRankSum=7.632;VQSLOD=3.2328;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,20:32:51.17:938,51,0	1/1:3,0:21:22.75:323,23,0	0/0:57,0:34:13.45:0,13,252	0/0:81,0:53:53.94:0,54,657	1/1:7,28:35:72.12:1218,72,0	1/1:6,0:25:38.94:412,39,0	1/1:12,0:20:14.96:151,15,0	0/0:33,0:33:8.56:0,9,60	1/1:12,23:35:51.17:938,51,0	1/1:19,34:53:99:1818,102,0	1/1:15,14:29:35.32:590,35,0	1/1:15,30:45:66.23:1213,66,0	1/1:12,22:34:48.16:882,48,0	1/1:14,25:39:66.23:1213,66,0	1/1:7,0:27:36:389,36,0	1/1:10,23:33:63.22:1158,63,0	1/1:9,0:24:14.37:170,14,0	1/1:6,13:19:30.10:552,30,0	1/1:3,0:10:7.01:102,7,0	1/1:13,0:41:62.82:641,63,0	1/1:7,0:18:8.79:65,9,0	1/1:13,18:31:39.09:682,39,0	1/1:9,20:29:39.03:717,39,0	1/1:5,16:21:39.13:717,39,0	1/1:13,19:32:50.97:936,51,0	1/1:12,0:31:48.14:559,48,0	1/1:10,0:26:32.78:329,33,0	1/1:2,0:9:15.04:173,15,0
chr10	89854113	.	CGTGTGT	C	593.94	PASS	AB=0.877;AC=25;AF=0.481;AN=52;BaseQRankSum=3.979;DP=773;FS=8.189;HRun=0;HaplotypeScore=141.7874;InbreedingCoeff=0.3838;MQ=55.10;MQ0=23;MQRankSum=-0.505;QD=1.55;ReadPosRankSum=-0.234;VQSLOD=2.1019;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:7.80:8,0,12	0/0:8,0:7:2.94:0,3,18	./.	0/0:57,0:16:0:0,0,0	0/0:16,0:15:8.54:0,9,94	1/1:21,9:28:2.70:60,3,0	1/1:21,14:35:12.98:243,13,0	0/0:29,0:28:1.55:0,2,4	0/0:22,0:28:9.49:0,9,102	1/1:17,3:19:0.66:56,1,0	1/1:10,0:13:0.88:2,1,0	0/0:25,0:32:12.03:0,12,243	0/0:28,0:36:17.04:0,17,202	0/0:23,0:29:9.01:0,9,125	1/1:28,1:37:7.01:68,7,0	0/0:18,0:26:2.49:0,2,56	0/1:25,0:37:2.18:2,0,13	0/0:13,0:16:2.14:0,2,37	1/1:14,2:14:3.01:60,3,0	./.	1/1:80,2:83:3.93:26,4,0	1/1:19,0:19:4.14:14,4,0	0/0:17,0:16:5.49:0,5,85	0/0:36,0:40:20.74:0,21,416	0/1:22,0:23:16.84:17,0,74	1/1:21,0:21:1.74:26,2,0	1/1:6,3:10:6.02:102,6,0	1/1:8,3:10:3.01:60,3,0
chr10	89855468	.	ACAGACTGACCACAGG	A	21236.12	PASS	AB=0.920;AC=27;AF=0.482;AN=56;BaseQRankSum=13.369;DP=771;FS=1.038;HRun=0;HaplotypeScore=341.8681;InbreedingCoeff=0.9212;MQ=79.49;MQ0=0;MQRankSum=-18.376;QD=67.20;ReadPosRankSum=3.544;VQSLOD=3.5657;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,9167	0/0:11,0:11:33.11:0,33,2275	0/0:31,0:30:78.22:0,78,4400	0/0:42,0:41:99:0,117,6432	1/1:4,23:27:63.22:2231,63,0	0/0:25,0:25:69.22:0,69,4405	0/0:31,0:31:90.30:0,90,6185	0/0:41,0:41:99:0,105,6228	1/1:6,17:23:39.13:1709,39,0	1/1:4,18:22:45.11:1572,45,0	1/1:6,9:15:12.04:447,12,0	1/1:5,25:30:57.20:2422,57,0	1/1:4,16:20:39.13:1712,39,0	1/1:5,29:34:57.09:2502,57,0	0/0:42,0:42:99:0,123,7884	1/1:4,26:30:66.15:2896,66,0	0/0:44,0:44:99:0,120,8342	1/1:5,12:17:21.07:846,21,0	0/0:22,0:22:54.10:0,54,3306	0/0:18,0:18:54.19:0,54,3646	0/0:55,0:55:99:0,154,10236	1/1:4,19:23:42.14:1654,42,0	1/1:3,11:14:27.09:870,27,0	1/1:3,13:16:14.88:578,15,0	1/1:2,20:22:45.15:1694,45,0	0/1:21,2:23:99:104,0,2880	0/0:36,0:36:99:0,99,6614	0/0:10,0:10:30.10:0,30,2078
chr10	89856594	.	A	AG	1578.59	PASS	AB=0.920;AC=20;AF=0.357;AN=56;BaseQRankSum=-1.980;DP=432;FS=5.321;HRun=8;HaplotypeScore=84.3187;InbreedingCoeff=0.6306;MQ=85.41;MQ0=0;MQRankSum=-0.101;QD=8.97;ReadPosRankSum=-2.750;VQSLOD=1.4484;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:32.50:0,32,214	0/0:7,0:7:12:0,12,109	0/0:23,0:20:3.34:0,3,218	0/0:19,0:18:0.43:0,0,64	0/0:11,0:11:14.92:0,15,123	1/1:4,4:8:5.98:54,6,0	1/1:11,23:34:37.49:394,37,0	1/1:3,5:8:15.50:162,15,0	0/1:13,0:13:27.02:27,0,116	0/0:12,0:12:15.01:0,15,137	0/0:7,0:7:8.99:0,9,81	0/0:17,0:17:21.42:0,21,188	0/0:13,0:13:26.95:0,27,239	0/0:21,0:21:38.97:0,39,356	0/0:23,0:23:28.27:0,28,269	0/0:22,0:22:16.14:0,16,276	0/1:10,0:10:7.34:7,0,119	0/0:23,0:23:44.96:0,45,404	1/1:4,5:9:18.05:203,18,0	0/1:8,7:15:7.07:184,0,7	1/1:13,17:30:24.07:277,24,0	0/0:15,0:15:30.02:0,30,274	0/0:10,0:10:17.97:0,18,156	0/0:15,0:15:29.98:0,30,269	0/1:13,0:13:1.60:2,0,91	1/1:5,7:12:11.59:116,12,0	1/1:9,11:19:26.90:272,27,0	1/1:4,0:4:8.99:74,9,0
chr10	89858390	.	C	CA	11303.95	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-16.394;DP=736;FS=7.091;HRun=6;HaplotypeScore=83.4758;InbreedingCoeff=0.9994;MQ=71.53;MQ0=1;MQRankSum=-2.233;QD=30.06;ReadPosRankSum=4.460;VQSLOD=5.2096;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:31:81.26:1019,81,0	0/0:8,0:8:24.04:0,24,237	0/0:26,0:23:33.04:0,33,461	0/0:21,0:19:25.37:0,25,320	1/1:4,24:28:72.22:890,72,0	0/0:32,0:32:90.18:0,90,909	0/0:22,0:22:54.12:0,54,551	0/0:37,0:37:82.46:0,82,983	1/1:1,27:28:69.22:868,69,0	1/1:5,29:34:87.27:1080,87,0	1/1:4,30:34:87.28:1088,87,0	1/1:2,15:17:33.11:412,33,0	1/1:3,23:26:59.52:752,60,0	1/1:3,27:30:66.21:830,66,0	0/0:34,0:34:96.18:0,96,968	1/1:1,25:26:63.20:793,63,0	0/0:25,0:25:72.16:0,72,733	1/1:0,23:23:51.16:641,51,0	0/0:26,0:26:69.01:0,69,683	0/0:30,0:30:84.19:0,84,856	0/0:24,0:23:66.15:0,66,673	1/1:2,29:31:78.25:969,78,0	1/1:2,25:27:66.21:828,66,0	1/1:1,22:23:57.18:717,57,0	1/1:1,17:18:33.11:415,33,0	0/0:35,0:35:93.21:0,93,949	0/0:28,0:27:72.16:0,72,734	0/0:12,0:12:36.08:0,36,366
chr10	89860920	.	T	TA	9604.75	PASS	AB=0.905;AC=35;AF=0.625;AN=56;BaseQRankSum=-15.280;DP=582;FS=0.334;HRun=7;HaplotypeScore=67.4196;InbreedingCoeff=0.9257;MQ=75.87;MQ0=2;MQRankSum=-0.846;QD=26.98;ReadPosRankSum=3.822;VQSLOD=5.4785;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:69.21:830,69,0	1/1:0,6:6:18.06:217,18,0	0/0:27,0:22:21.81:0,22,239	0/0:14,0:13:13.26:0,13,143	1/1:2,18:20:51.15:605,51,0	0/0:16,0:16:48.03:0,48,447	0/0:23,0:23:57.07:0,57,544	0/0:28,0:28:75.08:0,75,713	1/1:4,17:21:42.13:505,42,0	1/1:9,22:31:66.17:770,66,0	1/1:1,14:15:39.01:434,39,0	1/1:2,16:18:42.13:505,42,0	1/1:4,15:19:48.15:576,48,0	1/1:1,18:19:48.15:578,48,0	1/1:0,24:24:63.19:758,63,0	1/1:2,17:19:39.12:469,39,0	1/1:5,28:33:72.18:850,72,0	1/1:2,20:22:54.13:635,54,0	0/0:29,0:29:72.07:0,72,680	0/0:27,0:27:72.06:0,72,676	0/0:11,0:11:30.03:0,30,283	1/1:1,9:10:23.99:270,24,0	1/1:2,14:16:37.67:437,38,0	1/1:1,17:18:48.15:577,48,0	1/1:1,19:20:48.15:578,48,0	0/1:17,2:19:9.68:10,0,383	0/0:41,0:41:99:0,117,1114	0/0:10,0:10:30.05:0,30,289
chr10	89863026	.	A	AT	7059.07	PASS	AB=0.593;AC=25;AF=0.446;AN=56;BaseQRankSum=-11.884;DP=648;FS=0.657;HRun=10;HaplotypeScore=65.0343;InbreedingCoeff=0.9133;MQ=67.86;MQ0=0;MQRankSum=-0.016;QD=22.99;ReadPosRankSum=3.079;VQSLOD=5.6561;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,900	0/0:8,0:8:12.45:0,12,100	0/0:9,0:8:11.82:0,12,88	0/0:9,0:8:11.95:0,12,95	1/1:7,25:32:32.35:739,32,0	0/0:23,0:23:53.89:0,54,440	0/0:26,0:26:62.84:0,63,505	0/0:41,0:41:95.81:0,96,781	1/1:5,19:25:56.98:588,57,0	1/1:8,27:36:68.29:897,68,0	1/1:5,13:18:14.45:344,14,0	1/1:4,15:19:17.40:376,17,0	1/1:4,18:22:20.48:421,20,0	1/1:4,13:17:30.08:320,30,0	0/0:35,0:35:86.82:0,87,707	1/1:3,28:31:59.58:839,60,0	0/0:19,0:20:58.97:0,59,474	1/1:2,25:27:57.14:608,57,0	0/0:25,0:25:62.74:0,63,498	0/0:30,0:31:70.87:0,71,562	0/0:16,0:16:41.90:0,42,338	1/1:1,19:20:54.14:575,54,0	1/1:2,19:21:46:482,46,0	1/1:3,20:23:13.88:559,14,0	0/1:5,11:16:10.14:313,0,10	0/0:22,1:24:23.97:0,24,392	0/0:23,0:25:57.93:0,58,448	0/0:9,0:9:20.96:0,21,172
chr10	89863218	.	CAAGGAAGG	C	7870.96	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-4.365;DP=699;FS=0.000;HRun=0;HaplotypeScore=202.6534;InbreedingCoeff=0.9131;MQ=67.91;MQ0=4;MQRankSum=-10.262;QD=24.75;ReadPosRankSum=2.391;VQSLOD=4.2978;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:40:50.89:0,51,417	0/0:11,0:11:15.05:0,15,490	0/0:22,0:19:3.01:0,3,41	0/0:23,0:22:3.01:0,3,49	1/1:10,19:30:41.88:703,42,0	0/0:5,0:16:24.08:0,24,839	0/0:9,0:29:42.13:0,42,1365	0/0:29,0:29:34.35:0,34,1036	1/1:10,15:25:36.12:887,36,0	1/1:10,14:24:42.14:1014,42,0	1/1:7,9:16:12.04:302,12,0	1/1:16,13:29:27.09:647,27,0	1/1:12,14:26:27.09:679,27,0	1/1:7,11:18:12.04:265,12,0	0/0:20,0:26:30.09:0,30,850	1/1:10,22:32:45.15:1098,45,0	0/0:20,0:20:31.66:0,32,931	1/1:17,2:18:3.12:217,3,0	0/0:13,0:18:24.07:0,24,708	0/0:12,0:31:69.24:0,69,2265	0/0:28,0:54:75.26:0,75,2496	1/1:9,21:30:24.04:548,24,0	1/1:11,14:24:28.48:750,28,0	1/1:18,11:29:14.62:377,15,0	1/1:5,10:15:18.06:384,18,0	0/0:15,0:27:45.15:0,45,1588	0/0:6,0:17:42.14:0,42,1428	0/0:10,0:17:33.11:0,33,1208
chr10	89863616	.	T	TA	1702.62	PASS	AB=0.915;AC=10;AF=0.179;AN=56;BaseQRankSum=-9.706;DP=625;FS=4.923;HRun=12;HaplotypeScore=69.6860;InbreedingCoeff=0.6794;MQ=71.11;MQ0=0;MQRankSum=-0.636;QD=10.78;ReadPosRankSum=0.145;VQSLOD=3.1526;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:27:62.93:594,63,0	1/1:3,5:9:17.86:160,18,0	0/0:19,0:20:23.46:0,23,224	0/0:7,0:7:10.34:0,10,76	0/1:30,2:34:21.44:21,0,430	0/0:19,0:20:43.38:0,43,299	0/0:13,1:14:0.57:0,1,166	0/0:27,0:29:57.62:0,58,401	0/0:14,0:14:32.79:0,33,239	0/0:26,1:28:23.46:0,23,323	0/0:20,0:21:49.69:0,50,356	0/0:19,0:20:31.73:0,32,225	0/0:17,0:17:44.70:0,45,326	0/0:14,0:14:23.78:0,24,175	1/1:8,26:35:29.01:430,29,0	0/0:17,0:17:44.70:0,45,324	1/1:4,26:30:66.11:642,66,0	0/0:27,0:30:57.65:0,58,392	0/0:26,0:26:26.64:0,27,348	0/0:31,0:31:58.52:0,59,417	0/0:18,0:19:49.73:0,50,356	0/1:20,3:23:21.17:21,0,293	0/0:28,0:29:59.57:0,60,436	0/0:19,0:20:43.75:0,44,311	0/0:16,0:16:38.71:0,39,280	0/0:25,0:26:61.64:0,62,439	0/0:31,2:33:54.30:0,54,559	0/0:13,1:15:5.67:0,6,196
chr10	89864047	.	C	CCTAT	10112.62	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-2.473;DP=614;FS=3.048;HRun=0;HaplotypeScore=138.9066;InbreedingCoeff=0.8491;MQ=58.68;MQ0=4;MQRankSum=-1.469;QD=25.86;ReadPosRankSum=1.795;VQSLOD=4.7184;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,18:24:27.09:597,27,0	1/1:7,1:8:20.78:409,21,0	0/0:34,0:24:42.42:0,42,664	0/0:19,0:14:30.06:0,30,411	1/1:7,22:30:36.05:752,36,0	0/0:22,0:22:33.10:0,33,530	0/0:16,0:16:33.10:0,33,527	0/0:33,0:33:78.12:0,78,1197	1/1:5,20:27:27.09:671,27,0	1/1:20,3:23:60.13:1234,60,0	1/1:20,3:23:39.08:602,39,0	1/1:2,21:23:18.06:449,18,0	1/1:3,13:17:12.04:274,12,0	1/1:2,12:14:15.05:375,15,0	1/1:11,6:17:30.08:610,30,0	1/1:25,2:26:69:1113,69,0	1/1:19,3:21:39.12:885,39,0	1/1:1,14:15:6.02:150,6,0	0/0:15,0:15:36.10:0,36,538	0/0:32,0:32:54.14:0,54,851	0/0:9,0:9:3:0,3,27	1/1:2,14:18:12.04:300,12,0	1/1:3,26:29:10.60:297,11,0	1/1:5,10:17:6.02:150,6,0	1/1:32,3:34:69.14:1175,69,0	0/1:21,0:21:69.61:70,0,668	0/0:25,0:24:47.94:0,48,750	0/0:17,0:17:45.15:0,45,745
chr10	89864062	.	ACC	A	301.89	PASS	AB=0.769;AC=4;AF=0.071;AN=56;BaseQRankSum=5.919;DP=621;FS=2.995;HRun=2;HaplotypeScore=157.1016;InbreedingCoeff=-0.0831;MQ=53.66;MQ0=6;MQRankSum=-5.391;QD=2.74;ReadPosRankSum=2.023;VQSLOD=-0.4744;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:26:42.30:0,42,647	0/0:8,0:8:21.53:0,22,254	0/0:37,0:17:47.01:0,47,941	0/0:22,0:12:30.82:0,31,609	0/0:26,0:27:57.99:0,58,694	0/0:21,0:21:42.06:0,42,773	0/0:18,0:18:39.13:0,39,753	0/0:37,0:37:99:0,107,2072	0/0:26,0:26:38.14:0,38,505	0/1:25,5:30:8.73:9,0,470	0/1:12,9:21:37.93:134,0,38	0/0:20,0:20:21.06:0,21,260	0/0:18,0:18:23.91:0,24,347	0/0:13,0:13:21.06:0,21,286	0/0:14,0:14:31.60:0,32,313	0/1:18,7:24:99:99,0,254	0/0:31,0:30:19.68:0,20,398	0/0:17,0:17:15.05:0,15,248	0/0:16,0:16:48.11:0,48,842	0/0:26,0:26:60.17:0,60,1075	0/0:10,0:10:3.01:0,3,47	0/0:17,0:17:22.13:0,22,266	0/0:28,0:29:27.97:0,28,387	0/0:19,0:18:21.07:0,21,355	0/1:22,12:33:99:166,0,164	0/0:19,1:20:32.97:0,33,880	0/0:24,0:23:58.56:0,59,924	0/0:15,0:15:45.15:0,45,853
chr10	89864065	.	TCC	T	137.82	PASS	AB=0.721;AC=3;AF=0.056;AN=54;BaseQRankSum=7.678;DP=619;FS=4.410;HRun=3;HaplotypeScore=158.6262;InbreedingCoeff=-0.0640;MQ=53.89;MQ0=6;MQRankSum=-7.259;QD=1.89;ReadPosRankSum=3.774;VQSLOD=0.1211;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:28:50.29:0,50,911	0/0:8,0:8:22.27:0,22,300	0/0:39,0:19:49.94:0,50,866	0/0:22,0:12:30.32:0,30,540	0/0:26,0:26:62.08:0,62,961	0/0:22,0:22:41.90:0,42,541	0/0:17,1:18:39.08:0,39,589	0/0:42,0:42:99:0,101,1882	0/0:28,0:28:44.50:0,45,775	0/0:25,5:30:6.64:0,7,614	0/1:9,9:18:55.16:55,0,83	0/0:19,0:19:21.07:0,21,398	0/0:18,0:18:27.09:0,27,497	0/0:12,0:12:21.07:0,21,399	0/0:14,0:14:31.13:0,31,345	0/1:17,7:23:71.43:71,0,389	0/0:30,0:30:40.87:0,41,558	0/0:16,0:16:15.05:0,15,288	0/0:16,0:16:47.98:0,48,710	0/0:26,0:26:59.63:0,60,795	./.	0/0:16,0:16:22.14:0,22,355	0/0:29,0:29:27.98:0,28,470	0/0:18,0:17:21.07:0,21,403	0/1:19,12:30:99:111,0,269	0/0:20,1:21:32.24:0,32,576	0/0:23,0:22:37.84:0,38,635	0/0:15,0:15:44.80:0,45,633
chr10	89864067	.	CCTATCTAT	C	6046.19	PASS	AC=20;AF=0.385;AN=52;BaseQRankSum=1.012;DP=613;FS=1.039;HRun=0;HaplotypeScore=186.1279;InbreedingCoeff=0.9580;MQ=53.66;MQ0=6;MQRankSum=-8.127;QD=24.98;ReadPosRankSum=0.012;VQSLOD=4.1648;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:51.18:0,51,2027	0/0:7,0:8:12.04:0,12,262	0/0:34,0:16:9.01:0,9,244	./.	0/0:23,0:24:53.21:0,53,1939	0/0:6,0:23:26.95:0,27,218	0/0:9,0:18:17.99:0,18,169	1/1:31,12:43:33.06:496,33,0	0/0:27,0:27:42.14:0,42,1698	1/1:16,12:28:49.45:1046,49,0	1/1:15,3:18:24.04:306,24,0	0/0:20,0:20:21.07:0,21,861	0/0:18,0:18:27.09:0,27,1015	0/0:11,0:11:21.07:0,21,810	0/0:6,0:15:19.12:0,19,418	1/1:16,8:24:42.13:857,42,0	0/0:16,0:32:9.03:0,9,261	0/0:16,0:16:15.05:0,15,619	1/1:13,3:16:9.03:228,9,0	1/1:8,18:26:27.07:570,27,0	./.	0/0:16,0:16:22.14:0,22,751	0/0:29,0:29:28.49:0,28,963	0/0:18,0:17:24.08:0,24,944	1/1:23,6:28:42.08:613,42,0	1/1:9,12:21:39.10:832,39,0	1/1:9,14:23:30.10:719,30,0	1/1:9,5:14:15.05:379,15,0
chr10	89868546	.	C	CAG	29910.05	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.055;DP=717;FS=0.000;HRun=0;HaplotypeScore=112.3405;InbreedingCoeff=0.9646;MQ=51.90;MQ0=12;MQRankSum=3.822;QD=45.25;ReadPosRankSum=3.871;VQSLOD=6.3031;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,45:50:99:2356,137,0	1/1:1,5:6:18.06:309,18,0	0/0:27,0:10:21.01:0,21,274	0/0:29,0:14:39.13:0,39,526	1/1:2,21:23:54.19:966,54,0	1/1:1,19:20:57.20:1024,57,0	1/1:4,27:31:66.21:1159,66,0	1/1:6,29:34:93.23:1535,93,0	1/1:7,22:29:81.24:1391,81,0	1/1:4,14:18:48.16:860,48,0	1/1:2,13:15:33.10:563,33,0	1/1:9,26:35:93.28:1601,93,0	1/1:2,16:18:54.19:962,54,0	1/1:1,24:24:72.23:1265,72,0	1/1:7,27:34:93.28:1581,93,0	1/1:3,29:32:93.30:1636,93,0	1/1:1,24:25:72.25:1287,72,0	1/1:3,25:28:78.22:1368,78,0	1/1:5,19:24:66.21:1137,66,0	1/1:3,15:18:39.12:673,39,0	1/1:18,39:57:99:2311,131,0	1/1:5,18:24:54.17:936,54,0	1/1:1,18:19:51.10:887,51,0	1/1:3,19:22:53.84:970,54,0	1/1:2,17:19:42.14:756,42,0	1/1:7,17:24:57.67:1019,58,0	1/1:5,20:25:69.22:1194,69,0	1/1:0,3:3:9.03:162,9,0
chr10	89868598	.	AGT	A	17843.32	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.852;DP=707;FS=1.294;HRun=0;HaplotypeScore=144.5862;InbreedingCoeff=0.9394;MQ=63.79;MQ0=5;MQRankSum=-5.581;QD=27.71;ReadPosRankSum=6.624;VQSLOD=5.9058;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,30:43:99:1230,99,0	1/1:0,9:9:24.08:306,24,0	0/0:30,0:24:56.78:0,57,845	0/0:33,0:26:54.08:0,54,771	1/1:7,9:16:24.08:305,24,0	1/1:4,13:17:39.11:480,39,0	1/1:6,20:26:63.20:795,63,0	1/1:5,20:25:51.13:611,51,0	1/1:5,25:30:73.49:949,73,0	1/1:0,19:19:57.18:717,57,0	1/1:4,10:13:21.07:267,21,0	1/1:3,26:29:75.24:952,75,0	1/1:4,18:22:57.14:706,57,0	1/1:4,21:25:69.21:857,69,0	1/1:6,32:37:90.28:1130,90,0	1/1:3,33:36:93.29:1169,93,0	1/1:9,15:25:47.82:563,48,0	1/1:4,19:23:51.08:628,51,0	1/1:17,14:30:54.12:653,54,0	1/1:2,15:17:36.11:458,36,0	1/1:3,41:44:90.29:1145,90,0	1/1:8,15:23:39.12:496,39,0	1/1:6,13:19:32.84:418,33,0	1/1:11,20:31:5.60:564,6,0	1/1:4,10:14:25.33:341,25,0	1/1:6,28:34:87.27:1095,87,0	1/1:6,19:25:54.17:681,54,0	1/1:1,8:9:27.07:329,27,0
chr10	89869472	.	TTG	T	319.89	PASS	AC=8;AF=0.160;AN=50;BaseQRankSum=-2.249;DP=589;FS=28.405;HRun=0;HaplotypeScore=95.6175;InbreedingCoeff=0.4830;MQ=61.12;MQ0=14;MQRankSum=1.497;QD=3.64;ReadPosRankSum=1.330;VQSLOD=0.6098;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:36:13.40:0,13,103	1/1:2,0:2:3.01:31,3,0	./.	./.	0/0:15,0:12:3:0,3,26	0/0:18,0:16:5.99:0,6,48	0/0:39,0:36:12.02:0,12,132	0/0:19,0:18:8.50:0,9,67	0/0:8,0:8:11.97:0,12,101	0/0:19,0:19:20.95:0,21,183	0/0:5,0:5:2.99:0,3,24	0/0:19,0:18:0.94:0,1,2	0/0:18,0:15:3:0,3,27	0/0:21,0:20:2.54:0,3,6	1/1:16,13:29:24.04:262,24,0	0/0:22,0:22:12.47:0,12,114	1/1:16,11:27:14.76:145,15,0	0/0:12,0:12:9.03:0,9,118	0/0:18,0:17:6.01:0,6,68	0/0:21,0:21:6.48:0,6,62	0/0:56,0:53:14.99:0,15,157	0/0:18,0:18:2.99:0,3,24	./.	1/1:29,0:27:2.02:7,2,0	0/0:16,0:16:3.95:0,4,38	0/0:24,0:23:9.49:0,9,235	0/0:20,0:19:3:0,3,28	0/0:8,0:8:5.99:0,6,60
chr10	89870222	.	GA	G	5015.46	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=6.264;DP=587;FS=1.527;HRun=11;HaplotypeScore=64.4074;InbreedingCoeff=0.9195;MQ=62.42;MQ0=12;MQRankSum=3.580;QD=16.94;ReadPosRankSum=5.593;VQSLOD=5.5553;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:42:91.65:0,92,546	0/0:3,0:3:6.02:0,6,64	0/1:20,0:7:1.38:1,0,28	0/0:14,0:5:5.60:0,6,28	1/1:6,26:33:73.81:586,74,0	0/0:17,0:17:45.11:0,45,479	0/0:18,0:18:42.08:0,42,432	0/0:43,0:42:87.94:0,88,897	1/1:1,13:13:35.96:295,36,0	1/1:6,24:29:42.91:559,43,0	1/1:1,20:21:57.76:461,58,0	1/1:4,22:26:41.88:472,42,0	1/1:1,19:19:38.93:320,39,0	1/1:1,20:21:50.83:419,51,0	0/0:13,0:12:33.08:0,33,351	1/1:2,14:17:31.99:252,32,0	0/0:25,0:25:39.08:0,39,407	1/1:5,8:15:31:229,31,0	0/0:31,0:31:64.89:0,65,785	0/0:21,1:20:26.45:0,26,464	0/0:9,0:9:27.07:0,27,288	1/1:1,11:11:32.96:271,33,0	1/1:1,16:17:41.91:345,42,0	1/1:3,25:27:62.92:517,63,0	1/1:6,16:21:10.26:288,10,0	0/0:18,0:19:32.83:0,33,510	0/0:21,0:21:54.02:0,54,544	0/0:12,1:13:14.09:0,14,312
chr10	89870651	.	AAGAG	A	1829.02	PASS	AB=0.857;AC=38;AF=0.731;AN=52;BaseQRankSum=0.753;DP=589;FS=6.028;HRun=0;HaplotypeScore=106.9477;InbreedingCoeff=0.2101;MQ=60.49;MQ0=7;MQRankSum=1.029;QD=3.80;ReadPosRankSum=0.877;VQSLOD=1.3313;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:30:9.01:84,9,0	0/1:8,1:11:12.94:78,0,13	./.	./.	1/1:18,0:18:7.24:52,7,0	1/1:11,12:24:15.04:215,15,0	0/1:14,8:24:0.46:95,0,0	0/1:25,0:25:3.15:16,0,3	1/1:22,0:22:4.50:45,4,0	0/1:14,0:14:0.53:1,0,37	0/0:20,0:20:23.87:0,24,380	1/1:20,0:20:6.06:56,6,0	1/1:13,0:12:0.47:1,0,0	1/1:19,0:19:3.17:63,3,0	0/0:25,0:26:14.79:0,15,246	0/1:22,0:22:27.80:28,0,195	0/1:18,1:28:41.42:54,0,41	0/1:17,0:17:6.57:34,0,7	1/1:19,0:19:13.60:188,14,0	1/1:19,0:19:15.04:203,15,0	0/1:9,9:18:40.79:41,0,42	1/1:30,0:30:6.64:121,7,0	1/1:19,4:23:3.27:7,3,0	1/1:24,0:24:5.33:156,5,0	0/0:27,0:27:22.02:0,22,372	1/1:13,5:18:12.01:158,12,0	1/1:14,9:23:10.75:147,11,0	1/1:6,8:14:9.03:140,9,0
chr10	89871160	.	CATTATTATTATT	C	2743.55	PASS	AC=16;AF=0.381;AN=42;BaseQRankSum=1.759;DP=258;FS=0.000;HRun=0;HaplotypeScore=88.7140;InbreedingCoeff=0.6898;MQ=62.40;MQ0=2;MQRankSum=-0.844;QD=24.50;ReadPosRankSum=-2.035;VQSLOD=1.3292;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:13:8.99:0,9,142	./.	./.	./.	./.	1/1:9,7:16:15.05:520,15,0	1/1:3,2:5:6.02:208,6,0	1/1:21,9:30:27.07:458,27,0	0/0:10,0:10:6.02:0,6,134	0/0:8,0:9:3.01:0,3,37	0/0:10,0:10:3.01:0,3,73	0/0:2,0:3:3.01:0,3,37	0/0:1,0:3:6.02:0,6,96	0/0:6,0:8:12.01:0,12,206	0/0:9,0:9:12.04:0,12,704	0/0:10,0:12:6.02:0,6,194	0/0:16,0:17:45.15:0,45,2172	0/0:6,0:10:9.03:0,9,161	1/1:7,4:10:12.04:362,12,0	1/1:5,3:8:3.01:104,3,0	./.	./.	./.	0/0:2,0:3:6.02:0,6,113	0/0:5,0:11:18.06:0,18,338	1/1:5,5:10:15.03:315,15,0	1/1:7,2:9:3.01:104,3,0	1/1:11,12:23:24.08:831,24,0
chr10	89871406	.	TA	T	9882.26	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.888;DP=441;FS=52.730;HRun=8;HaplotypeScore=84.9403;InbreedingCoeff=0.9442;MQ=70.91;MQ0=0;MQRankSum=-5.101;QD=23.99;ReadPosRankSum=4.120;VQSLOD=1.4845;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:60.09:579,60,0	1/1:1,3:4:8.77:87,9,0	0/0:17,0:12:28.76:0,29,286	0/0:12,0:11:16.33:0,16,154	1/1:2,12:14:33.05:318,33,0	1/1:2,6:8:18.03:174,18,0	1/1:1,8:9:21.03:203,21,0	1/1:7,23:30:69.07:658,69,0	1/1:0,7:7:21.03:203,21,0	1/1:1,19:21:60.07:572,60,0	1/1:0,18:18:48.07:464,48,0	1/1:3,13:16:33.05:319,33,0	1/1:0,19:19:54.09:521,54,0	1/1:1,17:18:39.06:377,39,0	1/1:1,20:21:45.07:435,45,0	1/1:0,16:16:42.07:406,42,0	1/1:4,14:18:42.06:406,42,0	1/1:3,18:21:55.32:524,55,0	1/1:10,17:27:57.08:548,57,0	1/1:1,15:16:39.06:377,39,0	1/1:2,11:13:39.06:376,39,0	1/1:0,5:5:15.02:145,15,0	1/1:0,8:8:21.03:203,21,0	1/1:1,10:11:30.05:290,30,0	1/1:2,12:14:27.04:261,27,0	1/1:0,22:22:63.09:602,63,0	1/1:2,16:18:45.07:432,45,0	1/1:0,14:14:42.07:406,42,0
chr10	89871495	.	GA	G	7706.76	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.876;DP=509;FS=9.242;HRun=9;HaplotypeScore=71.8895;InbreedingCoeff=0.9199;MQ=76.00;MQ0=0;MQRankSum=-5.340;QD=15.76;ReadPosRankSum=3.649;VQSLOD=4.5263;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:26:75.04:686,75,0	1/1:2,10:12:20.92:192,21,0	0/0:11,0:11:23.96:0,24,250	0/0:8,0:9:8.01:0,8,102	1/1:2,14:16:42.02:384,42,0	1/1:2,0:26:36.40:124,36,0	1/1:2,0:10:10.18:30,10,0	1/1:0,0:18:32.62:96,33,0	1/1:1,7:8:21.01:192,21,0	1/1:7,15:22:48.02:439,48,0	1/1:4,12:16:38.99:352,39,0	1/1:2,14:16:42.02:384,42,0	1/1:7,7:14:21:192,21,0	1/1:5,15:20:45.02:412,45,0	1/1:8,20:28:66.03:604,66,0	1/1:4,24:28:72.03:659,72,0	1/1:1,28:29:84.05:769,84,0	1/1:1,17:18:45.02:412,45,0	1/1:2,0:20:34.22:100,34,0	1/1:3,0:17:26.41:78,26,0	1/1:1,0:22:34.63:102,35,0	1/1:3,4:7:15.01:137,15,0	1/1:6,14:20:42.02:384,42,0	1/1:1,15:16:39.02:357,39,0	1/1:4,13:17:39.02:357,39,0	1/1:9,0:19:19.52:60,20,0	1/1:8,0:21:30.11:89,30,0	1/1:2,0:23:39.17:114,39,0
chr10	89872102	.	GA	G	2144.60	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.256;DP=609;FS=0.000;HRun=10;HaplotypeScore=60.9850;InbreedingCoeff=0.9308;MQ=72.71;MQ0=3;MQRankSum=-0.605;QD=18.65;ReadPosRankSum=3.633;VQSLOD=4.3084;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,39:43:95.97:833,96,0	1/1:1,11:12:32.99:287,33,0	0/0:23,1:18:1.21:0,1,211	0/0:14,0:11:13.55:0,14,107	0/0:20,0:20:51.10:0,51,551	0/0:28,0:28:78.20:0,78,856	0/0:18,0:18:45.06:0,45,482	0/0:27,0:29:75.02:0,75,798	0/0:16,0:16:39.09:0,39,423	0/0:25,1:26:43.14:0,43,703	0/0:15,0:15:42.11:0,42,465	0/0:24,0:24:60.16:0,60,664	0/0:13,0:13:36:0,36,373	0/0:25,0:25:66.15:0,66,712	1/1:5,19:25:55.99:475,56,0	0/0:16,1:17:24.91:0,25,452	1/1:4,30:35:83.02:709,83,0	0/0:19,0:19:45.12:0,45,496	0/0:24,1:25:37.11:0,37,638	0/0:28,1:29:49.15:0,49,768	0/0:7,0:7:21.06:0,21,232	0/0:14,1:15:19.07:0,19,439	0/0:18,0:18:51.12:0,51,555	0/0:22,0:22:65.59:0,66,673	0/0:25,0:26:65.21:0,65,746	0/0:25,0:25:69.18:0,69,755	0/0:27,0:28:69.01:0,69,736	0/0:11,0:11:30.08:0,30,332
chr10	89872532	.	A	AC	852.76	PASS	AB=0.938;AC=20;AF=0.385;AN=52;BaseQRankSum=-2.763;DP=156;FS=0.891;HRun=8;HaplotypeScore=35.8982;InbreedingCoeff=0.5306;MQ=81.82;MQ0=0;MQRankSum=-1.247;QD=11.22;ReadPosRankSum=-0.766;VQSLOD=1.1542;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,1:10:11.25:111,11,0	0/0:1,0:1:3:0,3,27	0/0:9,0:7:3.78:0,4,77	0/0:5,0:5:7.78:0,8,52	0/0:3,0:3:2.99:0,3,27	1/1:2,0:2:3.01:33,3,0	1/1:4,4:8:11.99:124,12,0	1/1:11,3:14:21.01:226,21,0	0/0:6,0:6:14.99:0,15,132	0/0:3,0:3:9:0,9,82	0/0:5,0:5:9:0,9,82	0/1:6,1:7:11.96:12,0,70	0/0:6,0:6:14.96:0,15,128	0/0:6,0:6:9:0,9,80	0/0:3,0:3:3:0,3,27	0/0:10,0:10:3.43:0,3,74	0/0:10,0:10:13.80:0,14,135	1/1:1,0:1:2.60:10,3,0	1/1:1,1:2:3.01:35,3,0	./.	1/1:4,12:16:27.06:299,27,0	0/0:2,0:2:6:0,6,55	0/0:3,0:3:9:0,9,82	0/1:6,0:6:11.43:11,0,46	0/0:6,0:6:14.22:0,14,113	1/1:3,1:4:6.02:68,6,0	1/1:3,3:6:9.02:96,9,0	./.
chr10	89873788	.	GT	G	6203.88	PASS	AB=0.718;AC=34;AF=0.607;AN=56;BaseQRankSum=9.722;DP=613;FS=3.000;HRun=12;HaplotypeScore=64.1755;InbreedingCoeff=0.8468;MQ=71.09;MQ0=1;MQRankSum=-1.221;QD=16.59;ReadPosRankSum=4.578;VQSLOD=5.9578;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:28:11.40:410,11,0	1/1:2,6:8:11.95:93,12,0	0/0:16,0:11:4.20:0,4,49	0/1:16,2:18:8.30:8,0,206	1/1:3,28:32:76.54:573,77,0	0/0:24,0:25:59.94:0,60,585	0/0:20,0:20:42.06:0,42,415	0/0:38,0:38:78.07:0,78,751	1/1:4,15:19:41.82:325,42,0	1/1:5,21:27:67.78:516,68,0	1/1:3,12:15:5.40:225,5,0	1/1:3,25:29:61.08:469,61,0	1/1:2,11:13:32.87:255,33,0	1/1:1,18:19:40.91:382,41,0	1/1:6,20:27:58.78:447,59,0	1/1:3,25:28:68.71:534,69,0	1/1:3,19:22:47.80:371,48,0	0/1:2,12:15:0.56:179,0,1	0/0:22,0:22:51.06:0,51,498	0/0:22,0:22:23.56:0,24,394	0/0:27,0:27:40:0,40,417	1/1:1,19:20:44.79:348,45,0	1/1:0,12:12:29.89:232,30,0	1/1:3,18:21:50.78:395,51,0	1/1:0,21:21:56.78:441,57,0	0/0:27,1:29:51.73:0,52,679	0/0:29,0:29:72.13:0,72,725	0/0:11,0:11:30.06:0,30,304
chr10	89874843	.	AT	A	1217.67	PASS	AC=18;AF=0.375;AN=48;BaseQRankSum=-7.636;DP=111;FS=12.668;HRun=2;HaplotypeScore=22.0377;InbreedingCoeff=0.6626;MQ=61.21;MQ0=3;MQRankSum=0.956;QD=28.99;ReadPosRankSum=-0.746;VQSLOD=1.3306;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:3.42:0,3,92	0/0:1,0:1:2.68:0,3,11	0/0:8,0:2:6.02:0,6,75	0/0:8,0:6:15.02:0,15,186	0/0:2,0:2:2.80:0,3,13	1/1:0,4:4:9.03:116,9,0	1/1:0,6:6:18.06:233,18,0	1/1:0,7:7:21.02:240,21,0	0/0:3,0:3:8.69:0,9,57	0/0:2,0:2:5.17:0,5,20	./.	0/0:2,0:2:3.56:0,4,12	0/0:2,0:2:5.60:0,6,26	0/0:2,0:2:5.91:0,6,38	0/0:5,0:5:11.29:0,11,60	0/0:3,0:3:5.74:0,6,30	0/0:9,0:9:23.03:0,23,136	0/0:3,0:3:5.80:0,6,32	1/1:0,7:6:18.06:233,18,0	1/1:0,2:1:3.01:39,3,0	1/1:0,10:10:24.08:311,24,0	./.	./.	0/0:7,0:7:14.28:0,14,75	1/1:1,0:1:2.96:19,3,0	1/1:0,3:3:9.03:117,9,0	1/1:0,2:2:6.02:78,6,0	./.
chr10	89874869	.	T	TC	1827.90	PASS	AC=32;AF=0.615;AN=52;BaseQRankSum=0.915;DP=207;FS=6.999;HRun=8;HaplotypeScore=32.5360;InbreedingCoeff=0.8447;MQ=59.29;MQ0=3;MQRankSum=1.228;QD=19.04;ReadPosRankSum=0.277;VQSLOD=2.5882;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:39.12:450,39,0	./.	0/0:12,0:7:14.98:0,15,130	0/0:12,0:7:21.01:0,21,191	1/1:0,0:4:8.80:59,9,0	0/0:7,0:7:18.01:0,18,165	0/0:15,0:15:42.02:0,42,384	0/0:16,0:16:45.01:0,45,408	1/1:3,0:5:5.68:29,6,0	1/1:1,3:4:9.01:93,9,0	1/1:0,3:3:9.03:104,9,0	1/1:1,0:2:5.81:34,6,0	1/1:0,0:4:11.36:58,11,0	1/1:1,0:5:11.49:63,11,0	1/1:1,5:7:14.88:153,15,0	1/1:0,3:3:9.03:104,9,0	1/1:2,16:19:47.97:534,48,0	1/1:2,0:9:17.04:87,17,0	0/0:11,0:10:24:0,24,216	0/0:3,0:2:6:0,6,55	0/0:21,0:21:54.02:0,54,494	1/1:0,1:2:2.84:14,3,0	1/1:0,0:3:8.52:43,9,0	1/1:1,0:9:19.89:101,20,0	1/1:0,3:3:9.03:104,9,0	0/0:6,0:6:15.01:0,15,137	0/0:6,0:6:15:0,15,137	./.
chr10	89875101	.	T	TAC	5198.38	PASS	AC=26;AF=0.481;AN=54;BaseQRankSum=-0.888;DP=382;FS=21.589;HRun=0;HaplotypeScore=66.8648;InbreedingCoeff=0.9803;MQ=74.76;MQ0=0;MQRankSum=-4.039;QD=36.35;ReadPosRankSum=3.689;VQSLOD=4.4540;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:47.88:0,48,566	0/0:5,0:4:12.04:0,12,151	0/0:22,0:21:33.04:0,33,399	0/0:19,0:19:36.05:0,36,431	1/1:0,9:9:21.07:348,21,0	0/0:16,0:17:47.97:0,48,568	0/0:18,0:18:45.11:0,45,540	0/0:32,0:32:75.15:0,75,876	1/1:2,9:10:21.07:348,21,0	1/1:3,8:11:30.10:485,30,0	1/1:3,6:9:18.06:296,18,0	1/1:2,14:16:39.13:647,39,0	1/1:2,7:9:18.06:298,18,0	1/1:1,6:7:18.06:298,18,0	0/0:13,0:13:39.07:0,39,463	1/1:3,13:16:33.11:537,33,0	0/0:29,0:29:78.22:0,78,957	1/1:5,11:16:27.09:448,27,0	0/0:13,0:13:30.07:0,30,344	0/0:9,0:9:24.06:0,24,289	0/0:10,0:10:12.02:0,12,138	1/1:2,7:9:15.05:249,15,0	1/1:0,5:5:15.05:249,15,0	1/1:3,16:18:42.14:698,42,0	1/1:0,6:6:18.06:297,18,0	0/0:16,0:16:36.11:0,36,454	0/0:10,0:10:30.10:0,30,378	./.
chr10	89875141	.	TG	T	6208.73	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.341;DP=410;FS=0.791;HRun=4;HaplotypeScore=73.1145;InbreedingCoeff=0.7472;MQ=72.95;MQ0=9;MQRankSum=-4.495;QD=20.83;ReadPosRankSum=3.030;VQSLOD=4.1300;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,5:15:31.55:247,32,0	1/1:3,3:5:14.98:128,15,0	0/0:55,0:20:26.34:0,26,335	0/0:54,1:19:15.92:0,16,223	1/1:5,4:9:17.84:132,18,0	1/1:5,10:15:44.57:483,45,0	1/1:6,5:11:33.06:360,33,0	1/1:3,22:25:66.05:689,66,0	1/1:4,6:9:22.71:176,23,0	1/1:9,6:15:6.10:241,6,0	1/1:4,6:10:22.21:187,22,0	1/1:3,6:9:22.99:174,23,0	1/1:3,8:11:29.48:247,29,0	1/1:3,4:7:15.16:125,15,0	1/1:9,3:12:30.08:212,30,0	1/1:8,2:10:18.60:172,19,0	1/1:16,5:21:29.12:256,29,0	1/1:8,4:12:23.58:185,24,0	1/1:4,21:25:65.78:667,66,0	1/1:6,3:9:24.04:272,24,0	1/1:1,10:11:18.05:214,18,0	1/1:2,2:4:3.13:65,3,0	1/1:4,3:7:8.83:76,9,0	1/1:11,7:16:32.72:261,33,0	1/1:3,4:7:20.98:174,21,0	1/1:2,3:5:15.04:171,15,0	1/1:7,4:11:26.93:259,27,0	1/1:1,1:2:3.01:36,3,0
chr10	89875160	.	G	GTT	284.43	PASS	AB=0.949;AC=12;AF=0.214;AN=56;BaseQRankSum=5.321;DP=516;FS=1.310;HRun=0;HaplotypeScore=104.9848;InbreedingCoeff=-0.1152;MQ=53.50;MQ0=37;MQRankSum=-2.191;QD=1.91;ReadPosRankSum=-0.256;VQSLOD=2.0650;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,2:17:69.18:99,0,69	1/1:6,1:6:3.79:32,4,0	0/0:87,0:18:37.07:0,37,343	0/0:76,0:21:5.80:0,6,106	0/0:9,0:8:5.96:0,6,64	0/0:17,0:16:40.01:0,40,544	0/0:14,0:14:35.90:0,36,482	0/0:28,0:27:68.12:0,68,890	0/0:11,0:9:17.77:0,18,164	0/1:20,0:18:29.45:29,0,111	0/1:10,0:9:15.08:15,0,41	0/1:8,0:8:1.44:1,0,70	0/0:13,0:13:6.38:0,6,113	0/1:9,0:9:14.11:14,0,110	0/1:11,2:13:66.99:101,0,67	0/1:6,0:7:35.52:48,0,36	0/1:22,3:25:74.06:74,0,76	0/0:13,1:14:17.84:0,18,187	0/0:28,0:27:66.07:0,66,895	0/0:7,0:7:21.02:0,21,253	0/0:11,0:11:22.86:0,23,227	0/0:5,0:5:1:0,1,47	0/0:7,0:7:14.22:0,14,83	0/1:23,0:19:0.83:1,0,171	0/1:6,0:6:7.93:8,0,66	0/0:11,0:11:21.02:0,21,286	0/0:16,0:14:23.73:0,24,280	0/0:11,0:8:15.05:0,15,224
chr10	89876117	.	TACACACAC	T	10480.10	PASS	AB=0.858;AC=46;AF=0.821;AN=56;BaseQRankSum=-1.597;DP=679;FS=6.641;HRun=0;HaplotypeScore=214.7582;InbreedingCoeff=0.0060;MQ=53.88;MQ0=20;MQRankSum=-1.815;QD=16.74;ReadPosRankSum=5.095;VQSLOD=3.2285;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:14:2.83:51,3,0	0/1:8,0:8:21.51:22,0,31	0/1:58,0:20:8.93:9,0,357	0/0:53,0:30:38.33:0,38,758	1/1:16,3:21:32.94:845,33,0	1/1:28,0:27:3.01:55,3,0	1/1:2,0:14:3.01:34,3,0	0/1:13,0:21:96.23:290,0,96	1/1:6,3:25:23.40:347,23,0	0/1:17,3:19:12.72:675,0,13	1/1:11,2:12:16.86:343,17,0	1/1:21,5:30:21.95:588,22,0	1/1:20,3:30:18.07:1053,18,0	1/1:16,1:23:21.23:413,21,0	1/1:25,0:32:27.17:622,27,0	1/1:30,4:35:24.09:1081,24,0	0/1:21,0:20:16.49:32,0,16	0/1:10,2:12:41.48:234,0,41	1/1:22,0:20:17.61:513,18,0	1/1:30,0:29:6.02:106,6,0	1/1:27,0:25:17.76:231,18,0	1/1:16,5:23:39.03:854,39,0	1/1:6,17:26:8.41:211,8,0	1/1:20,1:27:22.57:368,23,0	0/1:3,9:13:1.55:63,0,2	1/1:23,0:23:30.96:636,31,0	1/1:15,0:18:36.11:615,36,0	0/1:7,0:7:45.01:191,0,45
chr10	89876131	.	CACACACAG	C	9648.68	PASS	AB=0.944;AC=34;AF=0.607;AN=56;BaseQRankSum=-9.386;DP=665;FS=33.876;HRun=0;HaplotypeScore=226.5939;InbreedingCoeff=-0.3854;MQ=51.11;MQ0=30;MQRankSum=0.137;QD=16.47;ReadPosRankSum=5.218;VQSLOD=2.7137;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:2.79:33,3,0	1/1:7,0:7:3.48:49,3,0	0/0:41,0:7:14.88:0,15,277	0/0:38,0:17:29.18:0,29,506	0/1:29,0:29:62.19:567,0,62	0/1:3,25:27:11.96:66,0,12	0/1:16,0:16:9.99:65,0,10	0/1:15,0:14:22.41:500,0,22	0/1:22,0:22:63.76:215,0,64	0/1:27,0:23:99:391,0,195	0/1:17,0:16:99:193,0,106	0/1:31,0:30:99:331,0,176	0/1:34,0:34:99:616,0,200	0/1:19,0:19:39.55:244,0,40	1/1:20,0:28:48.16:991,48,0	0/1:32,0:32:99:654,0,225	1/1:19,0:18:27.19:218,27,0	0/1:11,0:11:46.93:177,0,47	1/1:8,13:18:22.20:783,22,0	0/1:8,20:27:28.14:129,0,28	1/1:41,0:30:8.88:401,9,0	0/1:27,0:27:33.57:530,0,34	0/1:30,0:29:25.43:171,0,25	0/1:29,0:29:99:163,0,120	0/1:14,0:14:38.09:38,0,64	1/1:2,23:26:45.56:1055,46,0	1/1:13,3:16:15.17:772,15,0	0/1:6,1:6:59.15:299,0,59
chr10	89876133	.	CACACAGAGAGAGAGAG	C	4502.61	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-8.627;DP=651;FS=41.940;HRun=0;HaplotypeScore=302.4078;InbreedingCoeff=-0.5533;MQ=51.32;MQ0=29;MQRankSum=-0.869;QD=8.68;ReadPosRankSum=0.882;VQSLOD=2.6916;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:9:12.10:12,0,86	1/1:0,6:6:5.93:158,6,0	0/0:37,0:7:12.01:0,12,164	0/0:33,0:15:23.47:0,23,302	0/1:30,0:30:99:207,0,890	0/0:29,0:28:9.03:0,9,273	0/1:17,0:16:26.30:26,0,221	0/1:13,0:12:43.01:280,0,43	0/1:22,0:22:99:103,0,999	0/1:26,0:22:99:143,0,1565	0/1:17,0:16:30.86:31,0,805	0/1:32,0:31:95.63:96,0,1750	0/1:33,0:33:99:217,0,1909	0/1:19,0:19:47.90:48,0,662	1/1:26,0:25:48.15:1060,48,0	0/1:32,0:32:99:166,0,2075	1/1:16,0:17:30.10:525,30,0	0/1:10,0:10:99:108,0,360	0/1:19,0:16:99:235,0,426	0/1:28,0:26:23.02:23,0,369	0/1:39,0:28:65.72:66,0,399	0/1:27,0:27:99:266,0,721	0/1:31,0:30:75.06:75,0,418	0/0:30,0:30:1.23:0,1,1223	0/1:14,0:14:20.07:20,0,438	0/1:25,0:25:99:377,0,732	0/1:19,0:18:99:178,0,530	0/1:7,0:6:84.01:84,0,283
chr10	89876222	.	TAC	T	1718.29	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=-1.353;DP=740;FS=12.813;HRun=0;HaplotypeScore=184.0264;InbreedingCoeff=0.7824;MQ=50.29;MQ0=22;MQRankSum=2.760;QD=9.39;ReadPosRankSum=4.116;VQSLOD=2.6676;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:23:14.83:128,15,0	1/1:8,0:8:14.47:108,14,0	0/0:47,0:16:28.55:0,29,330	0/0:40,0:19:28.84:0,29,243	0/0:14,0:14:20.96:0,21,170	0/0:30,0:27:51.30:0,51,452	0/0:22,0:20:31.06:0,31,272	0/0:29,0:27:56.88:0,57,472	0/0:25,0:25:35.70:0,36,248	0/1:29,0:29:24.75:425,0,25	1/1:5,1:6:9:87,9,0	0/0:37,0:36:78.45:0,78,561	0/0:32,0:32:52.98:0,53,396	0/0:29,0:28:30.87:0,31,334	1/1:39,0:39:31.83:419,32,0	1/1:29,2:29:66.62:574,67,0	0/1:33,0:33:10.35:10,0,22	0/0:13,0:13:26.82:0,27,197	0/0:20,0:18:38.19:0,38,350	0/0:24,0:23:9.20:0,9,344	0/0:46,0:42:17.83:0,18,316	0/0:25,0:25:29.78:0,30,248	0/0:14,0:14:17.24:0,17,121	0/0:30,0:30:24.54:0,25,221	1/1:12,1:13:17.87:153,18,0	0/0:38,0:38:43.47:0,43,898	0/0:26,0:20:32.48:0,32,327	0/0:15,0:15:19.36:0,19,303
chr10	89876234	.	CAGAGAG	C	1523.62	PASS	AB=0.889;AC=13;AF=0.241;AN=54;BaseQRankSum=-2.844;DP=784;FS=21.732;HRun=0;HaplotypeScore=226.3818;InbreedingCoeff=0.1975;MQ=49.26;MQ0=33;MQRankSum=-1.193;QD=6.37;ReadPosRankSum=-1.683;VQSLOD=1.0100;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:2.93:0,3,71	0/0:7,0:7:8.95:0,9,114	./.	0/0:30,0:13:0:0,0,0	0/1:15,2:18:71.68:252,0,72	0/0:35,0:33:27.48:0,27,575	0/1:25,0:23:30.10:30,0,170	0/0:30,0:28:14.99:0,15,184	0/1:19,5:24:21.95:226,0,22	0/0:36,0:35:62.23:0,62,1192	0/1:15,0:13:0.40:0,0,318	0/1:34,2:35:99:310,0,136	0/1:23,9:33:54.19:266,0,54	1/1:21,9:29:11.46:194,11,0	0/0:41,0:41:54.17:0,54,1191	0/0:32,0:30:34.64:0,35,693	0/0:34,0:34:26.12:0,26,593	1/1:13,0:13:9:120,9,0	0/0:26,0:19:15.05:0,15,342	0/0:24,0:22:23.53:0,24,515	0/0:56,0:46:23.56:0,24,567	0/0:25,2:28:3.16:0,3,73	1/1:14,1:16:2.70:60,3,0	0/1:22,5:28:99:214,0,124	0/0:16,0:15:18.06:0,18,413	0/0:39,0:38:69.06:0,69,1266	0/0:31,0:25:17.42:0,17,378	0/0:15,0:15:21.04:0,21,405
chr10	89876256	.	G	GAGAA	5337.15	PASS	AB=0.812;AC=16;AF=0.286;AN=56;BaseQRankSum=-3.648;DP=789;FS=10.250;HRun=0;HaplotypeScore=196.4258;InbreedingCoeff=0.1116;MQ=45.87;MQ0=33;MQRankSum=2.432;QD=12.89;ReadPosRankSum=0.423;VQSLOD=3.5163;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:37.86:38,0,45	0/1:7,0:8:27.06:84,0,27	0/0:22,0:2:2.96:0,3,19	0/0:23,0:3:5.58:0,6,53	0/0:20,0:19:35.81:0,36,331	1/1:35,2:36:55.76:721,56,0	0/1:8,16:22:74.80:155,0,75	0/1:37,0:28:90.60:233,0,91	0/0:23,0:23:32.70:0,33,296	0/0:44,0:40:63.50:0,63,928	0/0:18,0:16:33.02:0,33,394	0/0:27,0:26:50.24:0,50,392	0/0:30,0:29:43.58:0,44,364	0/0:29,0:28:47.70:0,48,422	1/1:32,6:41:89.54:1216,90,0	0/0:32,0:30:53.67:0,54,629	1/1:7,31:41:27.06:624,27,0	0/0:17,0:16:38.82:0,39,306	0/1:23,2:18:7.83:427,0,8	0/1:30,0:29:99:238,0,117	0/1:33,23:48:95.76:393,0,96	0/0:25,0:24:19.51:0,20,165	0/0:20,0:20:32.76:0,33,283	0/0:28,0:28:34.03:0,34,343	0/0:17,0:16:27.04:0,27,400	0/1:33,4:37:99:601,0,225	0/1:10,17:23:26.53:372,0,27	0/1:8,12:22:99:234,0,103
chr10	89876331	.	TAC	T	4070.14	PASS	AB=0.975;AC=23;AF=0.411;AN=56;BaseQRankSum=-3.782;DP=615;FS=5.341;HRun=0;HaplotypeScore=156.7950;InbreedingCoeff=0.2381;MQ=67.81;MQ0=12;MQRankSum=1.837;QD=10.88;ReadPosRankSum=3.212;VQSLOD=3.4006;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:8.73:0,9,94	1/1:1,7:8:15.05:195,15,0	0/0:40,0:24:35.06:0,35,359	0/0:43,0:23:35.87:0,36,338	0/1:24,1:25:99:230,0,103	0/0:15,0:15:8.99:0,9,75	0/0:13,0:10:17.95:0,18,145	0/0:32,0:28:59.12:0,59,467	0/1:20,1:20:43.24:138,0,43	1/1:18,9:27:64.06:791,64,0	1/1:16,1:17:11.07:286,11,0	0/1:35,1:36:99:128,0,302	0/1:23,0:23:83.63:84,0,238	0/1:26,0:25:70.53:71,0,169	1/1:23,8:31:26.51:486,27,0	1/1:2,19:21:27.06:350,27,0	1/1:15,8:23:29.91:342,30,0	0/1:19,0:19:86.49:117,0,86	0/0:13,0:9:26.88:0,27,217	0/0:20,0:20:47.78:0,48,402	0/0:15,0:10:8.93:0,9,88	0/1:22,2:24:56.84:288,0,57	0/1:25,0:25:86.40:247,0,86	0/1:27,1:28:99:120,0,124	1/1:2,16:18:0.06:198,0,0	0/0:17,1:18:2.90:0,3,346	0/0:11,0:11:14.92:0,15,140	0/0:12,0:12:21:0,21,209
chr10	89876446	.	GAGAGAGAAAGAGAGAA	G	6518.70	PASS	AB=0.993;AC=36;AF=0.667;AN=54;BaseQRankSum=-6.993;DP=521;FS=4.255;HRun=0;HaplotypeScore=218.3890;InbreedingCoeff=-0.1878;MQ=48.99;MQ0=6;MQRankSum=3.294;QD=13.81;ReadPosRankSum=0.196;VQSLOD=3.6266;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:1.08:43,0,1	0/1:6,0:6:33.17:33,0,34	0/0:26,0:14:22.37:0,22,334	0/0:18,0:11:6.98:0,7,130	1/1:18,1:19:31.52:536,32,0	0/1:18,1:18:21.87:269,0,22	0/1:16,0:13:30.38:172,0,30	0/1:27,0:24:5.52:446,0,6	1/1:13,1:14:9.03:264,9,0	0/1:26,0:26:99:239,0,518	0/1:11,0:11:87.06:155,0,87	1/1:24,1:25:6.02:182,6,0	1/1:22,0:22:9.03:249,9,0	1/1:18,2:20:32.82:551,33,0	0/1:21,0:21:50.28:225,0,50	0/1:21,0:21:99:215,0,395	1/1:8,0:7:12.51:147,13,0	./.	0/1:20,0:18:24.49:228,0,24	1/1:18,0:17:24.70:291,25,0	0/1:26,0:21:41.09:114,0,41	1/1:23,0:23:41.69:704,42,0	1/1:16,0:16:2.37:32,2,0	0/1:17,1:17:2.64:203,0,3	0/1:18,0:18:99:224,0,185	0/1:25,0:25:92.54:542,0,93	1/1:23,0:21:10.58:123,11,0	1/1:12,0:11:8.80:330,9,0
chr10	89876448	.	GAGAGAAAGAGAGAA	G	8091.36	PASS	AB=1.000;AC=42;AF=0.778;AN=54;BaseQRankSum=-6.196;DP=519;FS=11.393;HRun=0;HaplotypeScore=197.7107;InbreedingCoeff=0.0358;MQ=48.61;MQ0=7;MQRankSum=3.178;QD=17.22;ReadPosRankSum=2.777;VQSLOD=2.7268;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:5.46:122,5,0	0/1:5,0:5:15.46:33,0,15	0/0:23,0:12:21.30:0,21,308	0/0:19,0:9:6.96:0,7,111	1/1:14,3:17:31.50:591,32,0	1/1:17,1:17:13.42:322,13,0	0/1:17,0:12:29.44:213,0,29	1/1:25,0:22:28.02:478,28,0	1/1:2,12:14:9.03:321,9,0	0/1:28,0:28:99:373,0,360	0/1:12,0:12:62.07:155,0,62	1/1:4,20:25:6.02:194,6,0	1/1:1,22:23:9.03:363,9,0	1/1:18,2:20:32.89:635,33,0	0/1:24,0:24:62.81:225,0,63	0/1:20,0:20:99:215,0,253	1/1:8,0:7:14.26:152,14,0	./.	1/1:3,17:18:47.76:424,48,0	1/1:17,1:17:24.85:361,25,0	0/1:24,0:19:8.94:141,0,9	1/1:21,4:25:1.92:751,2,0	1/1:1,13:14:2.36:32,2,0	1/1:18,0:17:11.90:286,12,0	0/1:19,0:19:99:255,0,188	1/1:24,1:25:14.14:853,14,0	1/1:22,0:20:12.04:225,12,0	1/1:11,0:10:24.07:370,24,0
chr10	89876450	.	GAGAAAGAGAGAA	G	8866.49	PASS	AB=0.977;AC=43;AF=0.796;AN=54;BaseQRankSum=-5.296;DP=520;FS=14.795;HRun=0;HaplotypeScore=183.3277;InbreedingCoeff=0.1409;MQ=48.34;MQ0=8;MQRankSum=3.057;QD=18.82;ReadPosRankSum=2.224;VQSLOD=2.4669;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,1:19:11.44:223,11,0	0/1:5,0:5:0.13:34,0,0	0/0:23,0:10:16.68:0,17,310	0/0:19,0:8:6.98:0,7,141	1/1:16,1:17:31.98:545,32,0	1/1:16,3:18:33.51:444,34,0	0/1:14,2:11:18.35:213,0,18	1/1:25,0:22:53.79:559,54,0	1/1:13,0:13:9.03:241,9,0	0/1:28,0:28:99:481,0,122	0/1:11,0:11:47.43:177,0,47	1/1:24,0:24:6.02:147,6,0	1/1:22,1:23:9.03:266,9,0	1/1:18,1:19:32.98:588,33,0	0/1:25,0:25:10.52:271,0,11	0/1:21,0:21:99:262,0,159	1/1:8,0:7:14.94:161,15,0	./.	1/1:21,0:18:47.94:506,48,0	1/1:16,2:17:25.30:328,25,0	1/1:25,0:20:10.76:240,11,0	1/1:26,1:27:30.98:762,31,0	1/1:14,0:14:2.52:32,3,0	1/1:16,1:16:12.36:278,12,0	0/1:18,1:19:65.46:304,0,65	1/1:23,1:24:42.09:1097,42,0	1/1:3,19:20:12.04:310,12,0	1/1:11,0:10:24.08:395,24,0
chr10	89876452	.	GAA	G	5028.91	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=-0.376;DP=521;FS=23.422;HRun=3;HaplotypeScore=141.5939;InbreedingCoeff=0.7232;MQ=46.63;MQ0=9;MQRankSum=4.216;QD=10.77;ReadPosRankSum=3.861;VQSLOD=0.5480;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,1:19:13.42:106,13,0	1/1:4,2:6:8.37:61,8,0	0/0:26,0:9:18.02:0,18,247	0/0:23,0:8:13.85:0,14,157	1/1:17,0:18:32.27:250,32,0	1/1:18,0:18:30.19:204,30,0	1/1:16,0:11:12.58:103,13,0	1/1:24,0:21:56.15:417,56,0	1/1:13,0:13:8.77:51,9,0	1/1:22,5:27:68.84:603,69,0	1/1:9,2:11:13.93:131,14,0	1/1:22,0:22:5.60:28,6,0	1/1:23,0:23:8.07:41,8,0	1/1:19,0:19:32.31:232,32,0	1/1:24,1:25:38.88:314,39,0	1/1:17,3:20:35.66:297,36,0	1/1:8,1:8:14.62:89,15,0	./.	1/1:20,1:18:39.12:250,39,0	1/1:17,0:16:22.80:159,23,0	1/1:23,2:20:18.40:139,18,0	1/1:27,0:27:44.58:355,45,0	1/1:14,0:14:2.49:15,2,0	1/1:16,0:16:13.60:110,14,0	1/1:16,2:19:38.91:322,39,0	1/1:24,0:25:66.94:497,67,0	1/1:20,1:20:11.32:59,11,0	1/1:9,0:8:23.97:198,24,0
chr10	89876456	.	GAGAGAA	G	5086.15	PASS	AB=1.000;AC=50;AF=0.926;AN=54;BaseQRankSum=-0.990;DP=550;FS=20.548;HRun=0;HaplotypeScore=173.8651;InbreedingCoeff=0.1643;MQ=46.57;MQ0=11;MQRankSum=3.086;QD=9.80;ReadPosRankSum=2.893;VQSLOD=2.6676;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:8.79:80,9,0	1/1:6,0:6:9.21:78,9,0	0/0:24,0:8:0.09:0,0,112	0/1:29,0:8:12.95:13,0,37	1/1:22,0:21:32.92:252,33,0	1/1:19,0:18:25.55:200,26,0	1/1:19,0:14:11.64:104,12,0	1/1:25,0:23:36.24:219,36,0	1/1:13,0:13:8.98:105,9,0	1/1:26,1:27:68.71:700,69,0	0/1:10,0:10:9.32:63,0,9	1/1:22,0:22:5.93:62,6,0	1/1:23,0:23:9.03:119,9,0	1/1:20,0:20:32.44:295,32,0	1/1:21,1:22:29.95:269,30,0	1/1:20,0:19:31.37:219,31,0	1/1:8,1:8:17.63:110,18,0	./.	1/1:20,0:17:30.87:187,31,0	1/1:20,0:19:14.34:136,14,0	1/1:26,0:21:13.23:108,13,0	1/1:28,0:28:38.76:360,39,0	1/1:14,0:14:2.25:16,2,0	1/1:21,0:20:13.42:134,13,0	1/1:16,2:18:38.93:346,39,0	1/1:28,0:28:67.03:567,67,0	1/1:23,0:20:11.93:128,12,0	1/1:13,0:11:26.93:217,27,0
chr10	89876458	.	GAGAA	G	5002.46	PASS	AB=0.967;AC=51;AF=0.944;AN=54;BaseQRankSum=-0.472;DP=550;FS=11.966;HRun=0;HaplotypeScore=161.1253;InbreedingCoeff=0.2383;MQ=46.39;MQ0=11;MQRankSum=2.302;QD=9.66;ReadPosRankSum=3.494;VQSLOD=3.7049;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:12.17:86,12,0	1/1:4,2:6:8.73:62,9,0	0/0:27,0:8:0.03:0,0,110	0/1:28,0:7:13.42:13,0,38	1/1:23,0:22:30.87:247,31,0	1/1:19,0:18:26.63:198,27,0	1/1:19,0:14:15.33:110,15,0	1/1:23,0:21:42.87:264,43,0	1/1:13,0:13:8.95:78,9,0	1/1:24,2:26:68.80:640,69,0	1/1:9,1:10:11.97:97,12,0	1/1:22,0:22:5.93:47,6,0	1/1:23,0:23:8.99:82,9,0	1/1:20,0:20:32.50:268,32,0	1/1:22,0:22:29.94:256,30,0	1/1:20,0:19:35.73:376,36,0	1/1:9,0:8:17.63:110,18,0	./.	1/1:20,0:17:31.13:188,31,0	1/1:20,0:19:14.65:123,15,0	1/1:26,0:21:13.81:100,14,0	1/1:28,0:28:38.75:334,39,0	1/1:14,0:14:2.25:16,2,0	1/1:21,0:20:14.16:122,14,0	1/1:19,0:18:38.39:333,38,0	1/1:28,0:28:69.25:535,69,0	1/1:23,0:20:11.88:100,12,0	1/1:13,0:11:26.40:216,26,0
chr10	89876460	.	GAA	G	4915.68	PASS	AB=1.000;AC=52;AF=0.963;AN=54;BaseQRankSum=-1.127;DP=549;FS=3.468;HRun=3;HaplotypeScore=149.4994;InbreedingCoeff=0.0482;MQ=46.13;MQ0=15;MQRankSum=3.045;QD=9.04;ReadPosRankSum=3.671;VQSLOD=1.7955;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:21,1:22:10.76:83,11,0	1/1:6,0:6:8.74:65,9,0	0/1:25,0:7:6.60:7,0,98	0/1:32,0:8:32.48:32,0,32	1/1:24,0:23:42.67:327,43,0	1/1:19,0:18:23.54:180,24,0	1/1:19,0:14:21.33:144,21,0	1/1:21,0:18:48.49:318,48,0	1/1:14,0:14:8.07:50,8,0	1/1:24,2:26:68.80:592,69,0	1/1:9,1:10:12:108,12,0	1/1:22,0:22:5.85:34,6,0	1/1:23,0:23:8.09:42,8,0	1/1:20,0:20:32.39:244,32,0	1/1:20,0:20:29.94:244,30,0	1/1:17,3:19:35.66:296,36,0	1/1:9,0:8:17.63:110,18,0	./.	1/1:20,0:17:35.52:234,36,0	1/1:19,0:18:14.58:110,15,0	1/1:24,0:19:12.16:93,12,0	1/1:27,0:27:42.06:334,42,0	1/1:15,0:14:2.49:16,2,0	1/1:21,0:20:13.49:108,13,0	1/1:21,0:19:44.28:354,44,0	1/1:28,0:28:68:486,68,0	1/1:23,0:20:11.47:68,11,0	1/1:13,0:11:29.89:235,30,0
chr10	89876527	.	C	CAG	1068.06	PASS	AB=0.969;AC=26;AF=0.464;AN=56;BaseQRankSum=-4.795;DP=611;FS=18.028;HRun=0;HaplotypeScore=196.7126;InbreedingCoeff=0.1244;MQ=71.96;MQ0=9;MQRankSum=1.686;QD=2.87;ReadPosRankSum=2.701;VQSLOD=1.4104;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:0.36:16,0,0	0/1:8,1:9:2.74:120,0,3	0/0:51,0:37:42.21:0,42,371	0/0:76,0:40:25.73:0,26,352	0/0:19,0:18:6.09:0,6,20	0/1:17,0:17:33.63:34,0,34	0/1:15,3:18:25.45:28,0,25	1/1:33,0:33:14.61:127,15,0	0/0:15,0:15:19.57:0,20,85	0/1:23,0:23:27.28:27,0,38	0/1:14,0:14:0:0,0,0	0/1:29,0:28:73.02:73,0,98	0/0:16,0:16:10.61:0,11,50	0/1:15,0:15:5.58:6,0,55	1/1:19,6:25:4.61:177,5,0	0/1:15,0:15:13.18:13,0,69	1/1:7,2:9:8.41:77,8,0	0/0:8,0:8:3.24:0,3,21	0/1:14,0:14:0.25:74,0,0	0/1:18,0:18:8.61:64,0,9	1/1:29,0:29:10.86:87,11,0	1/1:21,0:20:5.19:47,5,0	0/0:14,0:14:4.68:0,5,34	0/0:25,0:24:9.24:0,9,41	0/0:15,0:15:3.15:0,3,29	0/1:22,1:22:1.93:89,0,2	0/1:20,2:21:8.62:121,0,9	1/1:9,0:9:7.34:51,7,0
chr10	89876540	.	AGC	A	5954.02	PASS	AB=0.936;AC=45;AF=0.804;AN=56;BaseQRankSum=-6.546;DP=665;FS=3.796;HRun=0;HaplotypeScore=182.3607;InbreedingCoeff=-0.0490;MQ=67.87;MQ0=12;MQRankSum=-1.880;QD=8.95;ReadPosRankSum=-5.128;VQSLOD=3.7807;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:21,7:28:36.37:292,36,0	0/1:8,0:8:12.08:17,0,12	0/1:48,0:28:0.01:0,0,174	0/1:75,0:32:2.64:3,0,158	1/1:14,4:17:26.65:198,27,0	0/1:19,0:18:44.87:45,0,56	1/1:19,1:20:7.52:203,8,0	1/1:31,0:29:73.30:615,73,0	1/1:12,7:19:46.97:406,47,0	1/1:22,5:25:71.82:630,72,0	0/1:2,16:18:0.01:0,0,0	0/1:29,4:32:78.46:248,0,78	1/1:11,6:17:26.90:249,27,0	0/1:14,1:15:47.05:70,0,47	0/1:26,0:26:60.43:73,0,60	1/1:14,6:20:44.95:453,45,0	0/1:11,0:11:29.30:65,0,29	1/1:6,4:10:20.36:217,20,0	1/1:16,0:15:1.93:203,2,0	0/1:21,0:20:22.76:158,0,23	1/1:29,5:33:4.93:215,5,0	1/1:29,0:27:14.14:211,14,0	1/1:11,4:15:20.93:178,21,0	1/1:19,9:26:29.33:252,29,0	1/1:19,2:21:47.76:405,48,0	1/1:23,0:22:15.86:266,16,0	0/1:17,1:17:38.24:45,0,38	1/1:15,0:14:20.07:235,20,0
chr10	89876563	.	GAGAGAC	G	2913.97	PASS	AB=0.996;AC=27;AF=0.482;AN=56;BaseQRankSum=-4.479;DP=679;FS=6.753;HRun=0;HaplotypeScore=221.1471;InbreedingCoeff=-0.4176;MQ=53.75;MQ0=15;MQRankSum=-0.952;QD=5.60;ReadPosRankSum=-0.632;VQSLOD=1.8975;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,4:17:17.70:222,18,0	0/0:9,0:8:6.06:0,6,230	0/0:44,0:23:32.59:0,33,513	0/0:70,0:28:11.94:0,12,460	1/1:13,0:12:4.74:47,5,0	0/1:18,0:17:66.98:67,0,416	0/1:21,0:21:99:137,0,278	0/1:37,0:34:99:351,0,325	0/1:26,0:26:0.96:224,0,1	0/1:31,0:29:84.51:361,0,85	1/1:18,0:18:2.67:25,3,0	0/1:35,0:34:74.89:75,0,1079	0/1:13,0:13:43.72:143,0,44	0/1:17,0:17:8.88:9,0,397	0/0:26,0:26:27.21:0,27,506	0/1:25,0:25:99:127,0,238	0/0:10,0:10:18.92:0,19,256	1/1:12,0:12:0.50:100,1,0	0/1:14,0:13:62.08:62,0,282	0/1:21,0:19:99:142,0,376	0/1:46,0:45:99:319,0,239	0/1:29,0:26:79.38:79,0,152	0/1:17,1:18:33.32:98,0,33	0/1:31,1:30:19.54:78,0,20	0/1:19,0:19:67.09:184,0,67	0/1:21,0:20:48.30:48,0,602	0/1:17,0:16:29.44:29,0,408	0/1:20,0:19:99:145,0,162
chr10	89876565	.	GAGAC	G	4973.79	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=-6.304;DP=662;FS=6.179;HRun=0;HaplotypeScore=190.7762;InbreedingCoeff=-0.1187;MQ=54.07;MQ0=12;MQRankSum=0.876;QD=8.64;ReadPosRankSum=1.263;VQSLOD=3.4228;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,1:16:17.49:186,17,0	0/0:8,0:7:3.06:0,3,126	0/0:42,0:22:29.51:0,30,474	0/1:70,0:28:18.20:18,0,401	1/1:13,0:12:4.41:47,4,0	0/1:18,0:17:67.86:68,0,248	0/1:22,0:22:99:164,0,118	0/1:40,0:37:87.16:388,0,87	1/1:24,1:25:50.99:587,51,0	1/1:26,2:26:53.18:572,53,0	1/1:13,1:14:2.83:25,3,0	0/1:34,0:33:99:154,0,576	1/1:13,0:13:16.91:229,17,0	0/1:18,0:18:65.64:66,0,244	0/0:26,0:26:23.92:0,24,271	0/1:24,0:24:48.68:318,0,49	0/0:10,0:10:15.90:0,16,157	1/1:13,0:13:29.93:340,30,0	0/1:14,0:13:99:104,0,168	0/1:22,0:20:99:164,0,200	0/1:43,0:42:92.77:389,0,93	0/1:31,0:28:55.30:152,0,55	1/1:15,0:15:17.70:167,18,0	1/1:28,2:28:20.62:258,21,0	1/1:14,1:15:24.59:225,25,0	0/1:22,0:21:99:100,0,298	0/1:17,0:16:30.94:31,0,217	0/1:19,0:19:44.08:222,0,44
chr10	89876567	.	GAC	G	5801.74	PASS	AB=0.997;AC=42;AF=0.750;AN=56;BaseQRankSum=-5.022;DP=626;FS=7.607;HRun=0;HaplotypeScore=160.5123;InbreedingCoeff=0.0487;MQ=54.66;MQ0=11;MQRankSum=-1.003;QD=11.31;ReadPosRankSum=2.420;VQSLOD=4.3518;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:20.92:174,21,0	0/1:8,0:7:2.98:3,0,16	0/0:42,0:22:29.15:0,29,443	0/0:70,0:30:0.47:0,0,436	1/1:9,4:13:11.64:97,12,0	0/1:18,0:17:48.26:129,0,48	1/1:21,0:21:8.92:203,9,0	1/1:12,21:30:54.33:483,54,0	1/1:18,4:22:54.96:469,55,0	1/1:21,3:23:59.83:502,60,0	1/1:12,0:12:3:25,3,0	0/1:30,1:30:86.18:286,0,86	1/1:7,5:12:22.83:224,23,0	0/1:18,0:18:42.83:147,0,43	0/1:26,0:26:6.31:6,0,78	1/1:19,2:21:50.90:477,51,0	0/1:10,0:10:24.95:25,0,57	1/1:9,3:12:29.94:253,30,0	0/1:14,0:13:19.93:125,0,20	0/1:21,0:19:15.75:175,0,16	1/1:40,1:40:34.54:494,35,0	1/1:30,0:27:12.15:211,12,0	1/1:9,3:12:20.89:171,21,0	1/1:22,6:26:26.86:238,27,0	1/1:12,1:13:29.91:257,30,0	0/1:22,0:21:1.29:214,0,1	0/1:17,0:16:40.65:95,0,41	1/1:17,0:17:32:318,32,0
chr10	89877364	.	CCA	C	10383.53	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=16.816;DP=716;FS=10.913;HRun=0;HaplotypeScore=90.3320;InbreedingCoeff=0.9994;MQ=87.86;MQ0=1;MQRankSum=-3.288;QD=34.84;ReadPosRankSum=5.115;VQSLOD=6.6428;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:87.30:0,87,1550	0/0:8,0:8:20.99:0,21,375	0/0:22,0:22:57.19:0,57,1000	0/0:33,0:33:86.45:0,86,1446	1/1:2,24:26:66.22:923,66,0	0/0:26,0:26:78.27:0,78,1403	0/0:23,0:22:66.21:0,66,1159	0/0:45,0:45:99:0,108,1836	1/1:3,19:22:51.17:714,51,0	1/1:0,29:29:84.26:1157,84,0	1/1:1,22:23:51.14:713,51,0	1/1:1,28:29:78.26:1092,78,0	1/1:1,28:29:72.24:997,72,0	1/1:1,17:18:42.14:588,42,0	0/0:30,0:30:81.28:0,81,1449	1/1:1,23:24:60.20:840,60,0	0/0:24,0:24:60.21:0,60,1079	1/1:2,14:16:42.14:588,42,0	0/0:24,0:24:63.19:0,63,1062	0/0:25,0:25:72.19:0,72,1184	0/0:54,0:54:99:0,159,2726	1/1:1,21:22:54.15:756,54,0	1/1:0,19:19:48.16:671,48,0	1/1:1,22:22:54.18:756,54,0	1/1:1,17:18:42.14:588,42,0	0/0:20,0:20:57.17:0,57,953	0/0:32,0:32:90.23:0,90,1485	0/0:17,0:17:48.14:0,48,805
chr10	89877436	.	ATAGG	A	2610.81	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=2.062;DP=615;FS=0.453;HRun=0;HaplotypeScore=125.3073;InbreedingCoeff=-0.2478;MQ=62.10;MQ0=3;MQRankSum=0.878;QD=5.60;ReadPosRankSum=4.988;VQSLOD=2.1043;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:0:0,0,1	1/1:8,0:8:3.01:37,3,0	0/0:24,0:20:17.11:0,17,184	0/0:18,0:17:18.04:0,18,183	0/1:18,0:18:99:103,0,147	0/1:20,0:20:56.37:56,0,116	0/0:25,0:23:50.71:0,51,447	0/0:34,0:32:53.81:0,54,445	0/1:18,0:18:79.76:80,0,398	1/1:14,3:18:45.04:513,45,0	1/1:17,1:18:14.97:145,15,0	0/1:27,0:27:99:197,0,282	0/1:26,0:26:40.17:202,0,40	0/1:16,0:16:82.96:121,0,83	0/1:25,0:25:0.01:0,0,0	1/1:25,4:29:54.01:574,54,0	0/0:25,0:25:1.25:0,1,3	0/1:13,0:12:76.71:77,0,93	0/1:24,0:18:78.50:78,0,139	0/1:15,0:15:56.39:56,0,129	0/1:45,0:45:29.66:30,0,440	0/1:21,0:21:37.93:38,0,206	0/1:20,0:18:69.55:70,0,88	0/1:14,0:14:58.35:93,0,58	0/1:21,0:20:99:243,0,141	0/0:21,0:20:45.03:0,45,607	0/1:33,0:32:39.52:40,0,290	0/1:9,0:9:21.90:22,0,88
chr10	89877452	.	GTAGGTAGA	G	1551.03	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=-3.000;DP=564;FS=3.547;HRun=0;HaplotypeScore=143.0144;InbreedingCoeff=-0.1485;MQ=58.48;MQ0=5;MQRankSum=1.599;QD=4.33;ReadPosRankSum=-0.200;VQSLOD=2.5505;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:31:2.71:20,3,0	1/1:0,10:10:2.98:84,3,0	0/0:14,0:10:17.11:0,17,184	0/0:11,0:9:18.04:0,18,183	0/1:21,0:21:67.40:67,0,643	0/0:20,0:20:29.99:0,30,297	0/0:24,0:22:24.97:0,25,572	0/0:32,0:24:56.78:0,57,465	0/1:18,0:18:51.76:52,0,1027	0/1:16,0:16:78.86:216,0,79	0/1:15,0:15:71.05:71,0,84	0/1:21,0:21:99:169,0,714	0/1:25,0:25:99:187,0,418	0/1:18,0:18:99:109,0,417	1/1:3,21:24:9.26:52,9,0	0/1:26,0:26:99:238,0,180	1/1:2,22:24:1.22:17,1,0	0/1:13,0:12:65.87:66,0,406	0/1:24,0:17:2.44:2,0,355	0/0:13,0:13:18.95:0,19,255	0/0:36,0:36:77.93:0,78,701	0/1:19,0:18:31.87:32,0,618	0/1:17,0:15:60.56:61,0,329	0/1:14,0:14:89.85:90,0,273	0/1:22,0:21:99:185,0,475	0/0:18,0:17:48.04:0,48,915	0/0:30,0:29:56.79:0,57,452	0/0:8,0:8:20.77:0,21,164
chr10	89877456	.	GTAGA	G	1526.54	PASS	AB=1.000;AC=25;AF=0.481;AN=52;BaseQRankSum=-3.154;DP=534;FS=3.523;HRun=0;HaplotypeScore=108.3961;InbreedingCoeff=0.5002;MQ=57.49;MQ0=5;MQRankSum=1.548;QD=4.96;ReadPosRankSum=2.044;VQSLOD=2.0249;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:2.97:20,3,0	1/1:10,0:10:2.65:33,3,0	./.	./.	0/0:18,0:23:33.02:0,33,449	1/1:6,13:19:12.04:185,12,0	0/1:23,0:21:58.39:66,0,58	0/0:29,0:21:0:0,0,0	0/0:16,0:16:33.10:0,33,718	0/1:16,0:16:35.02:100,0,35	0/1:15,0:15:32.33:32,0,54	0/0:19,0:19:24.07:0,24,513	0/0:22,0:23:24.02:0,24,313	0/0:17,0:17:21.01:0,21,277	1/1:21,0:21:8.79:52,9,0	0/1:26,0:26:26.63:123,0,27	1/1:22,0:22:2.97:20,3,0	0/0:11,0:13:23.99:0,24,320	1/1:12,11:17:30.03:365,30,0	1/1:7,6:13:14.97:202,15,0	1/1:20,11:31:15.05:231,15,0	0/0:19,0:18:24.07:0,24,439	0/0:16,0:14:20.96:0,21,275	0/0:13,0:13:15.03:0,15,222	0/1:22,0:21:0.75:1,0,325	0/0:18,0:17:21.05:0,21,382	1/1:18,11:29:12.04:185,12,0	1/1:5,2:7:6.02:93,6,0
chr10	89877836	.	CT	C	1281.97	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=4.249;DP=294;FS=12.399;HRun=3;HaplotypeScore=32.5894;InbreedingCoeff=0.7851;MQ=42.13;MQ0=32;MQRankSum=1.526;QD=12.09;ReadPosRankSum=-1.040;VQSLOD=0.2844;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:29.54:0,30,181	0/0:2,0:2:5.98:0,6,62	0/0:3,0:1:1.55:0,2,4	0/0:4,0:2:2.79:0,3,13	1/1:15,0:14:32.42:250,32,0	0/0:25,0:25:63.94:0,64,537	0/0:4,0:3:8.70:0,9,89	0/0:31,0:23:53.55:0,54,511	1/1:5,0:4:2.90:16,3,0	1/1:13,0:13:38.72:294,39,0	1/1:12,0:11:9:82,9,0	1/1:4,0:3:5.87:35,6,0	1/1:7,0:7:6:54,6,0	1/1:5,0:4:11.84:83,12,0	0/0:7,0:7:15.77:0,16,124	1/1:9,0:6:14.95:127,15,0	0/0:24,0:17:32.79:0,33,301	1/1:12,1:7:9.01:91,9,0	0/0:11,0:10:29.57:0,30,207	0/0:6,0:6:14.91:0,15,127	0/0:3,0:3:5.98:0,6,62	1/1:2,0:2:3:29,3,0	1/1:2,0:2:6:55,6,0	1/1:4,0:4:9.01:84,9,0	1/1:12,3:13:35.65:286,36,0	0/0:12,0:10:13.91:0,14,149	0/0:19,0:17:44.87:0,45,446	0/0:19,0:17:47.84:0,48,462
chr10	89877838	.	TTA	T	1642.04	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=3.608;DP=296;FS=7.061;HRun=0;HaplotypeScore=32.2599;InbreedingCoeff=0.7919;MQ=44.92;MQ0=27;MQRankSum=-0.351;QD=14.53;ReadPosRankSum=-1.025;VQSLOD=1.7212;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:36.98:0,37,285	0/0:2,0:2:5.98:0,6,79	1/1:6,0:2:2.67:11,3,0	0/0:5,0:2:2.98:0,3,21	1/1:3,8:13:32.50:334,33,0	0/0:25,0:25:63.08:0,63,722	0/0:4,0:4:12:0,12,154	0/0:28,0:23:54.03:0,54,706	1/1:1,4:4:2.90:16,3,0	1/1:8,4:13:38.72:327,39,0	1/1:2,10:11:8.86:131,9,0	1/1:4,0:3:5.87:35,6,0	1/1:0,7:8:6.02:76,6,0	1/1:4,1:4:11.84:100,12,0	0/0:8,0:8:17.90:0,18,178	1/1:1,7:7:14.98:183,15,0	0/0:24,0:18:34.17:0,34,408	1/1:7,6:7:8.76:100,9,0	0/0:11,0:10:29.89:0,30,255	0/0:6,0:6:14.96:0,15,181	0/0:3,0:3:5.98:0,6,79	1/1:0,1:2:2.97:45,3,0	1/1:0,2:2:6.02:88,6,0	1/1:0,4:4:9.03:134,9,0	1/1:10,3:13:35.14:266,35,0	0/0:12,0:10:17.99:0,18,270	0/0:18,0:16:44.97:0,45,580	0/0:19,0:17:50.98:0,51,670
chr10	89878853	.	G	GTT	1804.47	PASS	AB=0.768;AC=42;AF=0.750;AN=56;BaseQRankSum=0.962;DP=385;FS=1.587;HRun=2;HaplotypeScore=74.6133;InbreedingCoeff=-0.0568;MQ=64.76;MQ0=3;MQRankSum=-0.413;QD=5.22;ReadPosRankSum=1.507;VQSLOD=-0.3265;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:25:71.88:96,0,72	1/1:7,0:8:10.31:88,10,0	0/0:23,0:11:6.81:0,7,241	0/0:16,0:11:20.44:0,20,198	1/1:19,2:23:19.07:189,19,0	1/1:4,1:14:15.21:142,15,0	1/1:11,2:14:7.86:152,8,0	1/1:7,0:9:4.48:28,4,0	1/1:13,0:13:1.48:67,1,0	0/1:11,0:15:7.60:63,0,8	0/1:7,1:13:33.40:33,0,35	1/1:10,1:14:3.64:73,4,0	1/1:9,0:9:5.84:84,6,0	0/1:6,0:6:14.43:42,0,14	0/1:7,1:17:1.91:17,0,2	0/1:4,0:13:8.31:8,0,15	1/1:20,0:17:3.32:34,3,0	1/1:6,10:19:9.68:212,10,0	0/1:8,0:14:5.94:119,0,6	1/1:3,1:10:5.21:60,5,0	0/1:9,1:9:18.07:28,0,18	1/1:3,0:4:7.47:60,7,0	1/1:0,2:11:11.54:93,12,0	1/1:7,6:14:4.78:70,5,0	0/1:7,0:13:11.67:40,0,12	1/1:13,0:13:11.86:80,12,0	0/1:11,0:18:12.66:53,0,13	1/1:3,0:3:2.88:27,3,0
chr10	89880536	.	A	AC	2356.20	PASS	AB=0.671;AC=9;AF=0.161;AN=56;BaseQRankSum=14.720;DP=808;FS=5.289;HRun=0;HaplotypeScore=111.8640;InbreedingCoeff=-0.1916;MQ=65.21;MQ0=3;MQRankSum=-3.637;QD=9.42;ReadPosRankSum=2.986;VQSLOD=3.9199;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,1689	0/0:9,0:9:27.08:0,27,362	0/0:31,0:26:78.04:0,78,1000	0/0:34,0:32:89.23:0,89,1144	0/0:32,0:32:66.08:0,66,887	0/1:18,12:30:99:242,0,248	0/1:17,14:31:99:340,0,238	0/1:32,18:50:99:340,0,585	0/0:34,0:34:99:0,102,1372	0/0:21,0:21:63.20:0,63,860	0/0:21,0:21:48.12:0,48,649	0/0:40,0:40:99:0,120,1642	0/0:21,0:21:63.19:0,63,847	0/0:35,0:35:99:0,102,1402	0/0:51,0:51:99:0,153,2105	0/0:40,0:40:99:0,117,1634	0/0:46,0:46:99:0,126,1708	0/0:18,0:18:54.11:0,54,710	0/1:14,8:22:99:169,0,219	0/1:6,11:17:99:144,0,101	0/1:14,21:35:99:502,0,236	0/0:23,0:23:63.21:0,63,860	0/0:11,0:11:27.08:0,27,361	0/0:31,0:31:84.27:0,84,1157	0/0:17,0:17:51.17:0,51,712	0/1:9,17:23:82.83:369,0,83	0/1:8,12:20:99:235,0,193	0/1:11,8:19:99:156,0,207
chr10	89880539	.	A	AAG	4365.38	PASS	AB=0.679;AC=9;AF=0.161;AN=56;BaseQRankSum=15.280;DP=803;FS=12.446;HRun=0;HaplotypeScore=121.2058;InbreedingCoeff=-0.0802;MQ=65.40;MQ0=3;MQRankSum=-2.723;QD=17.96;ReadPosRankSum=0.968;VQSLOD=4.4775;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1763	0/0:8,0:8:24.08:0,24,375	0/0:28,0:25:74.62:0,75,1044	0/0:37,0:35:97.84:0,98,1355	0/0:32,0:32:63.21:0,63,962	0/1:15,12:27:52.37:418,0,52	0/1:15,14:29:24.83:584,0,25	0/1:32,18:50:96.35:703,0,96	0/0:32,0:32:96.27:0,96,1436	0/0:22,0:22:63.21:0,63,966	0/0:21,0:21:48:0,48,730	0/0:38,0:38:99:0,114,1767	0/0:22,0:22:57.17:0,57,855	0/0:35,0:35:99:0,99,1525	0/0:53,0:53:99:0,153,2335	0/0:41,0:41:99:0,120,1827	0/0:46,0:46:99:0,135,1960	0/0:19,0:19:57.15:0,57,815	0/1:15,8:23:13.70:377,0,14	0/1:8,6:14:0.97:231,0,1	0/1:12,21:33:55.12:729,0,55	0/0:24,0:24:63.19:0,63,928	0/0:11,0:11:24.97:0,25,376	0/0:31,0:31:93.24:0,93,1339	0/0:19,0:19:54.16:0,54,812	0/1:10,17:24:40.22:643,0,40	0/1:10,12:22:43.94:394,0,44	0/1:10,8:18:67.27:286,0,67
chr10	89881408	.	G	GT	2536.72	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-11.210;DP=774;FS=0.954;HRun=6;HaplotypeScore=72.1896;InbreedingCoeff=1.0000;MQ=85.72;MQ0=0;MQRankSum=-0.671;QD=30.56;ReadPosRankSum=2.294;VQSLOD=4.3442;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,114,1153	1/1:2,16:18:48.15:604,48,0	0/0:25,0:25:65.32:0,65,690	0/0:27,0:27:59.16:0,59,534	0/0:39,0:39:99:0,117,1188	0/0:31,0:31:84.17:0,84,849	0/0:29,0:29:78.18:0,78,795	0/0:21,0:21:51.10:0,51,515	0/0:24,0:24:66.14:0,66,670	0/0:21,0:21:57.12:0,57,577	0/0:25,0:25:63.14:0,63,641	0/0:34,0:34:93.19:0,93,941	0/0:18,0:18:48.11:0,48,489	0/0:31,0:31:87.17:0,87,878	1/1:3,31:34:87.28:1095,87,0	0/0:32,0:32:93.16:0,93,932	1/1:1,30:31:78.25:981,78,0	0/0:15,0:15:39.08:0,39,397	0/0:26,0:26:78.18:0,78,795	0/0:41,0:41:99:0,111,1117	0/0:34,0:34:99:0,99,997	0/0:26,0:26:69.13:0,69,696	0/0:28,0:28:81.18:0,81,825	0/0:23,0:23:66.13:0,66,665	0/0:20,0:20:57.13:0,57,581	0/0:29,0:29:78.17:0,78,796	0/0:29,0:29:72.10:0,72,710	0/0:20,0:20:57.13:0,57,581
chr10	89882094	.	CAA	C	546.84	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=1.939;DP=640;FS=0.000;HRun=17;HaplotypeScore=79.4022;InbreedingCoeff=0.8689;MQ=60.70;MQ0=0;MQRankSum=5.370;QD=6.51;ReadPosRankSum=5.394;VQSLOD=-0.2764;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:32:37.15:0,37,352	0/0:9,0:9:17.99:0,18,177	0/0:19,0:12:3.72:0,4,16	0/0:21,0:15:1.24:0,1,15	0/0:23,0:41:80.75:0,81,845	0/0:27,0:26:66.10:0,66,746	0/0:24,0:25:38.59:0,39,363	0/0:21,0:20:28.31:0,28,303	0/0:14,0:15:42.04:0,42,458	1/1:16,8:24:15.69:193,16,0	1/1:7,11:19:9.84:92,10,0	0/0:35,0:35:57.10:0,57,644	0/0:19,0:19:43.76:0,44,430	0/0:5,0:14:11.98:0,12,127	0/0:22,0:33:40.80:0,41,410	1/1:10,14:25:29.29:225,29,0	0/0:24,0:24:34.71:0,35,344	0/0:16,0:20:42.48:0,42,409	0/0:28,0:27:55.98:0,56,654	0/0:26,0:25:53.89:0,54,548	0/0:10,0:10:18.41:0,18,167	0/0:10,0:21:37.90:0,38,410	0/0:14,0:25:28.86:0,29,297	0/0:9,0:27:21.51:0,22,225	1/1:6,10:16:23.70:190,24,0	0/0:24,0:24:51:0,51,531	0/0:25,0:24:53.96:0,54,555	0/0:9,0:9:15.04:0,15,173
chr10	89882444	.	CA	C	999.52	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.999;DP=390;FS=21.630;HRun=8;HaplotypeScore=40.7493;InbreedingCoeff=0.9090;MQ=66.93;MQ0=6;MQRankSum=1.625;QD=18.17;ReadPosRankSum=2.367;VQSLOD=2.0776;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.15:0,48,580	0/0:7,0:7:18.06:0,18,217	0/0:22,1:16:4.38:0,4,267	0/0:34,0:14:15.39:0,15,148	0/0:18,0:17:42.13:0,42,502	0/0:11,0:11:33.10:0,33,399	0/0:4,0:4:12.04:0,12,145	0/0:37,0:37:99:0,102,1209	0/0:11,0:11:27.07:0,27,314	1/1:5,18:23:48.07:463,48,0	1/1:3,10:13:30.04:289,30,0	0/0:7,0:7:12.03:0,12,134	0/0:8,0:8:12.04:0,12,145	0/0:10,0:10:27.08:0,27,326	0/0:8,0:8:21.06:0,21,254	1/1:2,9:11:24.03:232,24,0	0/0:19,0:19:45.14:0,45,544	0/0:12,0:12:30.09:0,30,362	0/0:16,0:16:48.14:0,48,575	0/0:5,0:5:11.99:0,12,125	0/0:9,0:9:18.06:0,18,217	0/0:10,0:10:21.06:0,21,249	0/0:9,0:9:12.04:0,12,145	0/0:12,0:12:30.09:0,30,361	1/1:0,8:8:18.03:174,18,0	0/0:19,0:18:42.05:0,42,468	0/0:15,0:14:33.09:0,33,386	0/0:14,0:14:42.05:0,42,466
chr10	89882808	.	TCTACATTCAGAGTTGCAGGCCAGCCAGGG	T	8435.51	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.491;DP=532;FS=7.972;HRun=0;HaplotypeScore=364.2055;InbreedingCoeff=0.9631;MQ=59.93;MQ0=3;MQRankSum=-3.523;QD=52.39;ReadPosRankSum=-1.185;VQSLOD=2.0621;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.26:0,75,8627	0/0:11,0:11:27.09:0,27,2819	0/0:18,0:9:27.09:0,27,1631	0/0:24,0:23:60.21:0,60,3577	0/0:24,0:24:69.24:0,69,5404	1/1:4,13:17:9.03:689,9,0	1/1:9,14:23:15.05:865,15,0	1/1:18,16:34:54.12:986,54,0	0/0:19,0:19:48.16:0,48,5020	0/0:17,0:17:48.16:0,48,3804	0/0:11,0:11:33.11:0,33,2327	0/0:19,0:19:47.90:0,48,5005	0/0:22,0:22:63.22:0,63,6953	0/0:23,0:23:63.22:0,63,6867	0/0:18,0:18:54.19:0,54,5599	0/0:18,0:18:54.17:0,54,5161	0/0:33,0:33:96.33:0,96,11478	0/0:26,0:26:75.26:0,75,7689	1/1:11,10:21:30.10:845,30,0	1/1:1,8:9:12.04:586,12,0	1/1:7,1:8:6.02:278,6,0	0/0:13,0:13:36.12:0,36,2576	0/0:9,0:9:21.07:0,21,1831	0/0:22,0:22:66.20:0,66,6895	0/0:18,0:18:51.18:0,51,4561	1/1:4,13:17:36.10:1430,36,0	1/1:4,10:14:18.06:1378,18,0	1/1:6,12:18:18.06:1379,18,0
chr10	89883799	.	T	TAC	1947.51	PASS	AB=0.775;AC=17;AF=0.327;AN=52;BaseQRankSum=-5.343;DP=566;FS=0.597;HRun=0;HaplotypeScore=79.2690;InbreedingCoeff=0.4732;MQ=60.82;MQ0=8;MQRankSum=-0.275;QD=7.76;ReadPosRankSum=-2.765;VQSLOD=2.5697;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,10:24:33.93:357,0,34	0/0:5,0:9:4.09:0,4,17	./.	./.	0/0:25,0:27:29.74:0,30,296	0/1:11,8:20:21.47:125,0,21	0/1:9,4:13:24.49:82,0,24	1/1:28,2:30:18.17:134,18,0	0/0:20,0:21:20.89:0,21,215	0/0:25,0:27:26.68:0,27,255	0/0:22,0:23:43.99:0,44,454	0/0:13,0:13:21.01:0,21,221	0/1:10,0:11:18.26:18,0,191	0/0:14,0:14:12.03:0,12,134	0/0:4,0:13:16.98:0,17,84	0/0:18,0:18:18.05:0,18,201	0/0:9,0:30:53.97:0,54,266	0/0:22,0:22:30.08:0,30,335	1/1:22,0:21:9.50:131,10,0	1/1:14,10:25:21.07:319,21,0	1/1:16,22:40:8.63:558,9,0	0/0:10,0:13:20.56:0,21,176	0/0:11,0:15:14.50:0,14,95	0/0:27,0:27:41.48:0,41,444	0/0:10,0:14:26.57:0,27,242	1/1:14,5:19:18.04:247,18,0	0/1:16,8:26:99:110,0,153	1/1:17,1:18:3.01:46,3,0
chr10	89884126	.	T	TA	5771.21	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-14.185;DP=534;FS=3.053;HRun=8;HaplotypeScore=64.6850;InbreedingCoeff=0.9602;MQ=60.75;MQ0=0;MQRankSum=1.671;QD=27.75;ReadPosRankSum=-0.407;VQSLOD=5.3021;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:33:81.24:935,81,0	0/0:10,0:10:10.89:0,11,32	0/0:12,0:9:23.37:0,23,195	0/0:7,0:4:5.99:0,6,55	0/0:22,0:22:60.03:0,60,549	1/1:1,24:25:66.20:762,66,0	1/1:0,16:16:42.12:485,42,0	1/1:3,24:25:69.21:796,69,0	0/0:22,0:22:60:0,60,539	0/0:32,0:32:81.04:0,81,741	0/0:27,0:27:74.98:0,75,674	0/0:11,0:11:33.01:0,33,299	0/0:18,0:18:23.44:0,23,384	0/0:16,0:16:45.02:0,45,412	0/0:29,0:29:43.60:0,44,126	0/0:18,0:18:45.02:0,45,412	0/0:22,0:22:21.67:0,22,63	0/0:21,0:20:51.02:0,51,467	1/1:7,19:26:8.21:574,8,0	1/1:5,22:28:62.95:690,63,0	1/1:0,5:5:12.04:138,12,0	0/0:8,0:8:21.01:0,21,192	0/0:17,0:17:45.02:0,45,412	0/0:11,0:11:24:0,24,220	0/0:23,0:23:60.02:0,60,549	1/1:2,17:19:26.74:561,27,0	1/1:2,19:21:54.16:623,54,0	1/1:2,6:8:18.05:208,18,0
chr10	89884131	.	AAAATGTTT	A	3480.84	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.741;DP=543;FS=1.970;HRun=0;HaplotypeScore=150.5148;InbreedingCoeff=0.9831;MQ=63.70;MQ0=0;MQRankSum=-10.770;QD=61.07;ReadPosRankSum=0.734;VQSLOD=3.3655;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.29:0,84,2956	1/1:2,7:9:18.06:489,18,0	0/0:14,0:11:33.11:0,33,1123	0/0:6,0:5:14.98:0,15,423	0/0:25,0:25:69.24:0,69,2694	0/0:26,0:26:72.25:0,72,2526	0/0:17,0:17:45.15:0,45,1476	0/0:29,0:27:81.19:0,81,2812	0/0:21,0:21:63.19:0,63,2514	0/0:34,0:34:99:0,99,3991	0/0:29,0:29:81.28:0,81,3412	0/0:11,0:11:33.11:0,33,1396	0/0:18,0:18:48.02:0,48,1909	0/0:16,0:16:45.15:0,45,1848	1/1:1,26:27:72.25:1956,72,0	0/0:20,0:20:54.19:0,54,2219	1/1:5,16:21:39.13:1035,39,0	0/0:21,0:20:54.19:0,54,2274	0/0:27,0:27:66.09:0,66,2397	0/0:25,0:25:69.24:0,69,2483	0/0:6,0:6:15.05:0,15,525	0/0:8,0:8:24.08:0,24,998	0/0:18,0:18:51.18:0,51,2120	0/0:10,0:10:27.09:0,27,1024	0/0:23,0:23:63.22:0,63,2577	0/0:22,0:22:63.08:0,63,2157	0/0:21,0:21:57.16:0,57,1894	0/0:7,0:7:21.07:0,21,738
chr10	89885239	.	AGAACC	A	1250.06	PASS	AB=0.931;AC=18;AF=0.409;AN=44;BaseQRankSum=0.626;DP=275;FS=33.339;HRun=0;HaplotypeScore=64.0224;InbreedingCoeff=-0.2749;MQ=49.75;MQ0=32;MQRankSum=-0.722;QD=6.61;ReadPosRankSum=0.604;VQSLOD=0.3268;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:12:4.25:4,0,142	0/1:5,2:6:76.09:76,0,133	0/0:10,0:4:8.46:0,8,66	0/0:15,0:9:9.73:0,10,130	./.	0/1:8,0:7:89.32:120,0,89	0/1:14,0:12:39.75:40,0,242	0/1:14,2:13:94.43:94,0,372	1/1:1,0:1:2.92:17,3,0	0/1:16,0:16:99:175,0,455	0/1:10,7:16:82.57:83,0,610	1/1:4,0:1:3.01:40,3,0	./.	./.	0/1:8,0:7:77.76:78,0,191	0/0:12,0:8:15.03:0,15,253	0/1:22,0:16:99:143,0,371	1/1:6,0:3:3.01:56,3,0	0/0:10,0:9:15.08:0,15,369	0/0:15,0:15:12.15:0,12,747	0/0:5,0:4:3.01:0,3,67	./.	./.	./.	0/1:18,1:19:99:176,0,548	0/1:14,2:14:99:216,0,284	0/0:14,0:11:22.57:0,23,430	0/1:16,0:12:70.16:70,0,402
chr10	89885275	.	A	AG	222.47	PASS	AC=8;AF=0.167;AN=48;BaseQRankSum=1.421;DP=233;FS=6.197;HRun=4;HaplotypeScore=53.1274;InbreedingCoeff=0.6726;MQ=75.14;MQ0=6;MQRankSum=0.758;QD=18.54;ReadPosRankSum=-1.319;VQSLOD=2.5896;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:12:18.05:0,18,202	0/0:7,0:7:11.99:0,12,122	0/0:23,1:14:2.87:0,3,107	0/0:29,0:16:23.09:0,23,233	./.	0/0:5,0:5:6.53:0,7,125	0/0:6,0:6:5.97:0,6,52	0/0:18,0:16:36.09:0,36,399	0/0:2,1:2:3.01:0,3,34	0/0:13,0:13:30.05:0,30,324	0/0:13,0:13:24.06:0,24,265	1/1:0,5:5:12.04:150,12,0	./.	1/1:0,3:3:9.03:117,9,0	0/0:5,0:5:15:0,15,156	0/0:7,0:7:15.04:0,15,170	0/0:11,0:9:24.07:0,24,272	1/1:0,2:2:3.01:41,3,0	0/0:13,0:13:36.04:0,36,391	0/0:11,0:11:24.07:0,24,266	0/0:5,0:5:9.02:0,9,98	./.	./.	1/1:1,1:2:3.01:41,3,0	0/0:6,0:6:15:0,15,154	0/0:10,0:10:24.05:0,24,260	0/0:11,0:10:18.05:0,18,204	0/0:4,0:4:9.02:0,9,101
chr10	89885385	.	G	GAAAA	4208.54	PASS	AB=0.627;AC=22;AF=0.393;AN=56;BaseQRankSum=7.402;DP=494;FS=14.340;HRun=11;HaplotypeScore=102.8980;InbreedingCoeff=0.7791;MQ=65.70;MQ0=2;MQRankSum=-8.136;QD=21.47;ReadPosRankSum=-4.269;VQSLOD=-0.3766;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:19:32.42:209,32,0	0/0:2,0:8:6.70:0,7,17	0/0:21,0:17:11.76:0,12,141	0/0:21,0:14:0.17:0,0,123	0/0:25,0:26:64.36:0,64,828	1/1:7,4:12:29.88:408,30,0	1/1:2,5:7:12.04:206,12,0	1/1:12,19:30:57.01:866,57,0	0/0:18,0:20:52.37:0,52,688	0/0:19,0:19:45.02:0,45,580	0/0:22,0:24:57.05:0,57,741	0/0:20,0:20:54.10:0,54,733	0/0:13,0:13:36.09:0,36,472	0/0:16,0:18:47.59:0,48,601	0/1:5,0:15:11.46:15,0,11	0/0:18,0:18:38.97:0,39,499	0/1:8,0:15:6.87:39,0,7	0/0:25,0:23:53.91:0,54,678	1/1:6,5:19:50.92:770,51,0	1/1:2,15:18:26.99:388,27,0	1/1:3,4:7:9.02:137,9,0	0/0:13,0:13:33.07:0,33,433	0/0:19,0:20:30.19:0,30,490	0/0:16,0:16:32.97:0,33,446	0/0:13,0:14:33:0,33,415	1/1:3,16:20:38.95:516,39,0	1/1:2,18:22:26.90:587,27,0	1/1:1,6:7:3.01:69,3,0
chr10	89885407	.	T	TTA	446.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.730;DP=501;FS=4.572;HRun=0;HaplotypeScore=88.7491;InbreedingCoeff=0.8711;MQ=70.68;MQ0=0;MQRankSum=-2.326;QD=27.93;ReadPosRankSum=0.291;VQSLOD=4.8192;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:16:30.10:541,30,0	0/0:10,0:10:27.09:0,27,384	0/0:12,0:12:21.04:0,21,249	0/0:11,0:8:14.78:0,15,162	0/0:26,0:26:69.21:0,69,945	0/0:11,0:11:30.05:0,30,403	0/0:17,0:16:39.06:0,39,483	0/0:39,0:39:96.30:0,96,1322	0/0:21,0:21:60.19:0,60,834	0/0:23,0:23:60.13:0,60,784	0/0:21,0:21:60.18:0,60,821	0/0:26,0:26:72.24:0,72,1025	0/0:13,0:13:33.10:0,33,454	0/0:25,0:25:63.19:0,63,863	0/0:15,0:15:30.07:0,30,377	0/0:19,0:19:54.16:0,54,736	0/0:20,0:19:54.16:0,54,750	0/0:24,0:24:54.76:0,55,867	0/0:18,0:18:45.12:0,45,603	0/0:15,0:15:27.04:0,27,344	0/0:8,0:8:12:0,12,148	0/0:15,0:15:36.10:0,36,478	0/0:25,0:25:72.23:0,72,1004	0/0:19,0:19:57.16:0,57,761	0/0:12,0:12:36.12:0,36,513	0/0:9,0:9:8.84:0,9,123	0/0:24,0:24:42.06:0,42,549	0/0:7,0:7:12.04:0,12,171
chr10	89887296	.	GTCTC	G	1412.23	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.366;DP=679;FS=0.707;HRun=0;HaplotypeScore=106.6041;InbreedingCoeff=0.9568;MQ=53.06;MQ0=9;MQRankSum=0.074;QD=24.35;ReadPosRankSum=3.990;VQSLOD=3.5352;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:48.24:0,48,1131	1/1:2,7:8:18.06:299,18,0	0/0:30,0:5:6.02:0,6,107	0/0:58,0:12:17.97:0,18,281	0/0:26,0:26:66.19:0,66,1574	0/0:24,0:24:60.19:0,60,1386	0/0:20,0:18:42.14:0,42,967	0/0:40,0:34:87.28:0,87,2061	0/0:17,0:17:39.10:0,39,905	0/0:14,0:14:36.09:0,36,783	0/0:15,0:15:33.10:0,33,772	0/0:25,0:24:60.14:0,60,1275	0/0:31,0:31:90.21:0,90,1859	0/0:15,0:15:42.13:0,42,1000	1/1:6,19:25:27.01:478,27,0	0/0:27,0:27:66.20:0,66,1464	1/1:4,20:24:45.13:776,45,0	0/0:15,0:14:36.08:0,36,798	0/0:19,0:18:48.11:0,48,1050	0/0:17,0:17:42.11:0,42,921	0/0:34,0:34:65.72:0,66,1510	0/0:17,0:17:45.14:0,45,1052	0/0:26,0:26:66.18:0,66,1483	0/0:34,0:34:84.25:0,84,1920	0/0:12,0:12:24.08:0,24,603	0/0:31,0:31:81.04:0,81,1607	0/0:25,0:25:72.23:0,72,1714	0/0:18,0:18:48.16:0,48,1188
chr10	89887372	.	CTGTGTGTGTGTGTG	C	1715.19	PASS	AB=0.556;AC=15;AF=0.313;AN=48;BaseQRankSum=4.195;DP=514;FS=0.000;HRun=0;HaplotypeScore=190.1754;InbreedingCoeff=0.6026;MQ=43.06;MQ0=35;MQRankSum=-4.442;QD=10.03;ReadPosRankSum=0.686;VQSLOD=1.7871;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:21.20:0,21,691	0/0:2,0:2:3.01:0,3,103	./.	./.	0/0:11,0:13:0.94:0,1,2	1/1:25,1:27:6.80:230,7,0	0/0:20,0:19:2.49:0,2,6	0/0:32,0:23:0:0,0,0	./.	0/0:6,0:11:15.41:0,15,369	./.	0/0:16,0:15:17.23:0,17,221	0/0:18,0:16:22.73:0,23,291	0/0:10,0:9:9.03:0,9,142	0/0:17,0:17:9.01:0,9,419	0/0:24,0:24:51.17:0,51,1192	0/0:27,0:23:46.97:0,47,1638	0/0:13,0:11:12.92:0,13,230	1/1:27,0:25:1.54:96,2,0	1/1:9,6:17:3.01:112,3,0	1/1:18,4:14:4.66:11,5,0	0/0:13,0:19:0.90:0,1,22	0/0:11,0:21:2.36:0,2,95	0/0:39,0:35:11.56:0,12,208	0/1:3,0:14:0:0,0,0	1/1:22,6:30:26.91:849,27,0	1/1:11,7:15:12.04:452,12,0	1/1:8,0:5:2.96:109,3,0
chr10	89888849	.	TATGGATGG	T	8662.64	PASS	AB=0.677;AC=26;AF=0.464;AN=56;BaseQRankSum=-5.601;DP=704;FS=3.267;HRun=0;HaplotypeScore=197.8560;InbreedingCoeff=0.8020;MQ=69.25;MQ0=7;MQRankSum=-12.121;QD=25.26;ReadPosRankSum=0.931;VQSLOD=4.7065;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:84.27:0,84,3066	0/0:2,0:5:5.99:0,6,49	0/0:34,0:27:2.99:0,3,24	0/0:30,0:22:23.94:0,24,420	1/1:12,10:22:15.05:357,15,0	0/0:8,0:23:29.97:0,30,245	0/0:8,0:17:23.98:0,24,241	0/0:24,0:33:42.05:0,42,610	1/1:13,20:33:36.12:883,36,0	1/1:15,13:28:39.13:925,39,0	1/1:13,8:21:15.05:367,15,0	1/1:14,14:28:30.10:705,30,0	1/1:7,14:21:45.15:1112,45,0	1/1:4,19:23:36.12:875,36,0	0/0:15,0:39:59.92:0,60,490	1/1:6,25:31:54.19:1264,54,0	0/0:7,0:15:20.97:0,21,171	0/1:15,8:24:87.36:353,0,87	0/0:8,0:13:19.79:0,20,152	0/0:19,0:33:47.63:0,48,415	0/0:11,0:25:38.97:0,39,412	1/1:8,13:21:24.08:545,24,0	1/1:13,13:26:18.06:447,18,0	1/1:7,8:15:12.04:288,12,0	1/1:8,10:18:21.07:520,21,0	0/0:14,0:26:42:0,42,477	0/1:13,1:30:22.43:22,0,375	0/0:10,0:20:11.99:0,12,98
chr10	89889366	.	T	TATGTTTACTTATATGAGGCTCTA	3433.14	PASS	AB=0.697;AC=34;AF=0.944;AN=36;BaseQRankSum=-2.106;DP=56;FS=7.782;HRun=0;HaplotypeScore=31.9746;InbreedingCoeff=-0.2169;MQ=132.07;MQ0=3;MQRankSum=-1.692;QD=70.06;ReadPosRankSum=0.587;VQSLOD=1.1360;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:6.02:162,6,0	1/1:1,0:1:3.01:73,3,0	0/1:5,0:8:17.24:855,0,17	0/1:3,1:6:16.28:794,0,16	1/1:1,0:1:3.01:99,3,0	./.	./.	1/1:3,0:3:6.02:185,6,0	1/1:3,0:3:6.01:124,6,0	./.	1/1:3,0:3:6.02:203,6,0	1/1:2,0:2:3.01:99,3,0	./.	./.	1/1:3,0:2:3.01:49,3,0	./.	./.	1/1:3,0:2:3.01:99,3,0	1/1:2,0:2:4.26:101,4,0	1/1:2,0:2:3.01:105,3,0	1/1:1,0:1:3:25,3,0	1/1:2,0:2:6.01:75,6,0	./.	1/1:3,0:3:6.02:187,6,0	./.	./.	1/1:1,0:1:3.01:99,3,0	1/1:1,0:1:3.01:98,3,0
chr10	89889742	.	GAGAAAGAAAGAAAGAAAGAAAGAA	G	7213.76	PASS	AC=36;AF=0.900;AN=40;BaseQRankSum=0.357;DP=324;FS=0.000;HRun=0;HaplotypeScore=179.0479;InbreedingCoeff=0.2282;MQ=66.53;MQ0=2;MQRankSum=0.262;QD=32.35;ReadPosRankSum=1.975;VQSLOD=3.5597;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,0:2:3.01:168,3,0	./.	0/0:21,0:15:0.41:0,0,7	1/1:11,14:25:6.03:632,6,0	1/1:10,0:16:18.06:996,18,0	./.	./.	1/1:8,6:14:3.01:188,3,0	1/1:9,13:19:30.09:876,30,0	1/1:4,6:9:3.01:188,3,0	1/1:4,5:9:12.04:753,12,0	1/1:10,10:20:18.06:1130,18,0	1/1:4,0:4:3.01:49,3,0	1/1:7,0:8:3.01:168,3,0	1/1:14,12:26:9.03:565,9,0	1/1:6,0:6:0.47:1,0,0	1/1:7,8:15:6.02:377,6,0	./.	1/1:6,0:7:3.01:168,3,0	./.	1/1:4,7:11:9.03:410,9,0	1/1:2,7:9:0.27:1,0,0	0/0:11,0:11:0:0,0,0	1/1:4,4:8:6.02:377,6,0	1/1:10,0:11:3.48:168,3,0	./.	./.
chr10	89889842	.	AGGCCCT	A	6134.11	PASS	AB=0.610;AC=21;AF=0.420;AN=50;BaseQRankSum=7.312;DP=338;FS=2.642;HRun=0;HaplotypeScore=79.7609;InbreedingCoeff=0.7004;MQ=37.46;MQ0=21;MQRankSum=-6.792;QD=38.58;ReadPosRankSum=-4.012;VQSLOD=3.7763;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,15:19:83.86:476,0,84	1/1:1,6:5:15.05:360,15,0	./.	./.	0/0:17,0:17:30.54:0,31,1081	1/1:2,10:8:6.02:144,6,0	1/1:5,13:14:24.97:578,25,0	1/1:7,15:22:48.16:1154,48,0	0/0:16,0:16:24.08:0,24,865	0/0:13,0:11:27.09:0,27,939	0/0:13,0:12:15.05:0,15,531	0/0:9,0:7:18.06:0,18,648	0/0:15,0:14:36.12:0,36,1160	0/0:10,0:10:30.10:0,30,1044	1/1:1,19:14:33.11:793,33,0	0/0:20,0:19:29.86:0,30,1077	1/1:0,4:4:9.03:216,9,0	0/0:8,0:8:18.06:0,18,649	1/1:2,12:12:27.07:599,27,0	0/1:5,5:9:99:330,0,229	./.	0/0:10,0:9:12.04:0,12,432	0/0:13,0:11:18.06:0,18,635	0/0:15,0:13:30.10:0,30,1066	0/0:7,0:7:15.05:0,15,539	0/1:3,8:10:81.12:549,0,81	1/1:2,14:13:30.10:717,30,0	1/1:0,4:4:9.03:216,9,0
chr10	89889891	.	AAAG	A	1325.54	PASS	AB=0.955;AC=12;AF=0.214;AN=56;BaseQRankSum=-3.788;DP=421;FS=3.351;HRun=0;HaplotypeScore=86.0401;InbreedingCoeff=0.2919;MQ=41.68;MQ0=18;MQRankSum=0.992;QD=8.84;ReadPosRankSum=-1.367;VQSLOD=2.5981;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:27:18.43:0,18,364	0/0:8,0:7:4.86:0,5,109	0/1:16,0:5:14.14:22,0,14	0/0:6,0:2:5.68:0,6,39	0/0:10,0:10:3.46:0,3,113	0/0:18,0:14:22.28:0,22,323	0/1:17,0:14:5.10:5,0,215	0/0:26,0:23:48.94:0,49,498	0/0:17,0:17:1.12:0,1,92	1/1:3,11:14:31.30:365,31,0	1/1:12,8:20:47.96:538,48,0	0/0:10,0:6:8.51:0,9,152	0/0:11,0:10:15.80:0,16,208	0/0:9,0:9:11.04:0,11,108	0/1:22,0:15:23.94:24,0,212	0/1:7,3:9:9.33:173,0,9	0/1:9,0:6:9.53:10,0,64	0/0:10,0:10:14.55:0,15,191	0/0:16,0:11:8.12:0,8,165	0/0:17,0:16:32.66:0,33,370	0/0:11,0:8:14.93:0,15,140	0/0:7,0:7:14.95:0,15,164	0/0:16,0:15:23.20:0,23,249	0/0:14,0:12:9.46:0,9,110	1/1:13,5:18:31.53:345,32,0	0/1:23,1:20:0.58:1,0,370	0/0:25,0:21:30.55:0,31,384	0/0:6,0:6:0.99:0,1,87
chr10	89889892	.	AAG	A	1282.33	PASS	AB=0.954;AC=22;AF=0.393;AN=56;BaseQRankSum=-1.685;DP=425;FS=1.598;HRun=0;HaplotypeScore=81.1089;InbreedingCoeff=-0.2253;MQ=41.86;MQ0=18;MQRankSum=-1.472;QD=4.33;ReadPosRankSum=-2.388;VQSLOD=2.0053;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:26:13.42:13,0,252	0/1:6,2:7:55.30:61,0,55	0/1:16,0:5:14.29:18,0,14	0/0:8,0:3:4.81:0,5,33	0/1:9,1:10:22.37:22,0,101	0/0:18,0:14:27.83:0,28,244	0/0:17,0:14:7.53:0,8,183	0/0:28,0:25:29.88:0,30,438	0/1:16,1:17:25.14:25,0,53	1/1:14,0:14:32.48:251,32,0	1/1:18,2:20:47.19:366,47,0	0/1:10,0:6:20.31:20,0,106	0/1:11,0:10:42.48:42,0,123	0/0:9,0:9:0.63:0,1,67	0/1:20,2:15:79.70:80,0,161	0/1:10,0:9:19.59:97,0,20	0/1:8,2:7:58.10:58,0,72	0/1:10,0:10:4.25:4,0,114	0/1:16,0:11:8.12:8,0,133	0/0:17,0:16:8.44:0,8,255	0/0:11,0:8:14.85:0,15,117	0/0:7,0:7:14.83:0,15,114	0/0:14,0:13:23.12:0,23,186	0/1:15,0:13:25.14:25,0,79	1/1:19,0:19:35.25:281,35,0	0/1:24,0:20:28.86:29,0,265	0/1:25,0:21:24.31:24,0,252	0/1:5,1:6:27.14:27,0,72
chr10	89889893	.	AG	A	1449.64	PASS	AB=0.932;AC=27;AF=0.482;AN=56;BaseQRankSum=-1.267;DP=410;FS=4.347;HRun=1;HaplotypeScore=76.8195;InbreedingCoeff=-0.3994;MQ=42.91;MQ0=19;MQRankSum=-3.614;QD=4.13;ReadPosRankSum=-2.812;VQSLOD=-0.5627;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:25:69.81:70,0,137	0/1:8,0:7:10.49:10,0,28	0/1:16,0:5:12.04:12,0,15	0/0:9,0:4:5.54:0,6,58	0/1:8,0:8:12.29:12,0,69	0/0:18,1:15:4.03:0,4,168	0/1:14,3:14:44.46:44,0,126	0/1:26,2:26:55.17:55,0,365	0/1:16,0:16:4.32:4,0,62	1/1:13,1:14:30.01:201,30,0	1/1:20,0:20:45.26:314,45,0	0/1:9,1:6:61.49:61,0,65	0/1:8,2:10:75.61:95,0,76	0/1:8,0:8:21.41:21,0,41	0/1:20,1:16:26.67:27,0,174	1/1:9,0:9:0.45:79,0,0	0/1:9,1:7:23.44:23,0,61	0/1:7,2:9:23.49:23,0,46	0/1:15,1:11:25.13:25,0,101	0/1:15,1:15:57.71:58,0,156	0/0:11,0:8:13.45:0,13,93	0/0:7,0:7:14.57:0,15,87	0/0:13,0:12:19.06:0,19,93	0/1:12,4:14:64.97:77,0,65	1/1:13,1:14:31.64:241,32,0	0/1:23,1:20:53.10:53,0,182	0/1:21,4:21:81.93:82,0,176	0/1:6,0:6:23.83:24,0,59
chr10	89890097	.	T	TA	6229.60	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-4.051;DP=383;FS=3.929;HRun=6;HaplotypeScore=56.8678;InbreedingCoeff=0.9469;MQ=65.69;MQ0=0;MQRankSum=-5.764;QD=29.66;ReadPosRankSum=1.376;VQSLOD=5.6280;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:39.11:476,39,0	1/1:0,7:7:12.04:151,12,0	0/0:10,0:7:15.83:0,16,125	0/0:21,0:17:21.53:0,22,195	0/0:17,0:17:36.07:0,36,361	1/1:0,21:21:57.05:676,57,0	1/1:3,4:7:21.01:232,21,0	1/1:5,24:29:71.98:852,72,0	0/0:12,0:11:30.07:0,30,306	0/0:18,0:18:48.10:0,48,486	0/0:14,0:14:36.07:0,36,360	0/0:8,0:8:18.04:0,18,183	0/0:4,0:4:6:0,6,56	0/0:6,0:6:6.01:0,6,61	1/1:4,11:15:30.10:377,30,0	0/0:8,0:8:24.05:0,24,240	1/1:3,29:32:69.22:868,69,0	0/0:18,0:17:36.05:0,36,359	1/1:3,11:14:36.12:452,36,0	1/1:3,10:13:36.09:427,36,0	1/1:0,4:4:11.87:109,12,0	0/0:6,0:6:12.02:0,12,122	0/0:8,0:8:21.05:0,21,214	0/0:4,0:4:12:0,12,114	0/0:17,0:17:51.09:0,51,507	1/1:5,18:23:32.60:712,33,0	1/1:4,18:22:60.14:710,60,0	1/1:1,5:6:15.05:189,15,0
chr10	89891972	.	C	CA	5808.03	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-6.242;DP=501;FS=1.895;HRun=7;HaplotypeScore=63.1212;InbreedingCoeff=0.6069;MQ=85.16;MQ0=1;MQRankSum=-0.367;QD=15.87;ReadPosRankSum=-1.342;VQSLOD=4.5425;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:21:9.57:10,0,27	1/1:0,1:10:22.99:128,23,0	0/1:33,0:28:1.56:2,0,174	0/1:18,0:14:6.44:6,0,50	0/0:17,0:17:44.81:0,45,417	1/1:2,17:19:39.12:463,39,0	1/1:2,23:25:60.18:712,60,0	1/1:3,26:29:78.15:849,78,0	0/0:12,0:12:30.03:0,30,284	0/1:15,0:15:1.72:49,0,2	0/1:9,0:9:6.13:16,0,6	0/0:17,0:17:51.03:0,51,471	0/0:20,0:20:48.02:0,48,451	0/0:14,0:14:33.04:0,33,318	1/1:0,0:15:39.77:202,40,0	0/1:13,0:13:4.65:20,0,5	1/1:1,0:28:53.97:274,54,0	0/0:20,0:21:42.38:0,42,486	1/1:4,15:19:45.14:535,45,0	1/1:1,18:19:51.16:604,51,0	1/1:1,9:11:24.07:285,24,0	0/0:12,0:12:30.01:0,30,279	0/0:13,0:13:30.04:0,30,289	0/0:9,0:9:21.03:0,21,202	0/1:18,0:18:18.54:36,0,19	1/1:6,19:25:51.13:591,51,0	1/1:3,18:21:54.17:641,54,0	1/1:3,14:17:33.10:386,33,0
chr10	89892515	.	A	AAC	14713.57	PASS	AB=0.571;AC=25;AF=0.446;AN=56;BaseQRankSum=-18.644;DP=639;FS=0.969;HRun=0;HaplotypeScore=66.0903;InbreedingCoeff=0.9299;MQ=79.04;MQ0=4;MQRankSum=-0.888;QD=45.69;ReadPosRankSum=-1.800;VQSLOD=5.2266;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:33:87.30:1566,87,0	0/1:3,9:11:14.93:405,0,15	0/0:19,0:18:38.71:0,39,521	0/0:14,0:13:31.87:0,32,422	0/0:23,0:23:66.22:0,66,924	1/1:2,17:20:51.17:908,51,0	1/1:2,26:28:78.27:1405,78,0	1/1:6,35:41:99:1775,99,0	0/0:23,0:23:57.18:0,57,781	0/0:25,0:25:72.24:0,72,1008	0/0:16,0:16:48.16:0,48,668	0/0:16,0:16:48.16:0,48,672	0/0:10,0:10:30.10:0,30,419	0/0:19,0:19:51.17:0,51,713	1/1:0,18:18:54.19:972,54,0	0/0:28,0:28:84.28:0,84,1175	1/1:2,25:26:66.23:1189,66,0	0/0:25,0:25:66.22:0,66,924	1/1:4,20:25:63.19:1078,63,0	1/1:2,14:16:45.15:804,45,0	1/1:5,19:24:54.18:950,54,0	0/0:19,0:19:57.19:0,57,798	0/0:32,0:32:90.30:0,90,1257	0/0:29,0:29:87.29:0,87,1218	0/0:19,0:19:54.18:0,54,756	1/1:2,31:33:54.30:1609,54,0	1/1:0,30:30:78.27:1404,78,0	1/1:1,14:13:36.12:648,36,0
chr10	89893417	.	TA	T	4439.35	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.312;DP=550;FS=0.000;HRun=11;HaplotypeScore=130.9766;InbreedingCoeff=0.9236;MQ=77.72;MQ0=13;MQRankSum=-5.397;QD=10.65;ReadPosRankSum=4.232;VQSLOD=3.5084;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:25:37.15:112,37,0	1/1:2,0:9:12.93:42,13,0	0/0:62,1:30:35.70:0,36,424	0/0:68,2:27:24.09:0,24,172	1/1:3,24:27:65.17:503,65,0	1/1:10,0:21:23.01:76,23,0	1/1:1,0:11:23.12:72,23,0	1/1:9,0:29:30.60:97,31,0	1/1:5,15:20:26.93:221,27,0	1/1:3,18:21:56.75:452,57,0	1/1:5,6:11:17.93:142,18,0	1/1:4,7:11:17.97:148,18,0	1/1:1,11:12:26.92:222,27,0	1/1:6,10:16:36.95:274,37,0	1/1:5,0:14:23.04:70,23,0	1/1:2,6:8:20.97:172,21,0	1/1:3,0:18:24.44:71,24,0	1/1:7,20:27:62.84:502,63,0	1/1:4,0:18:28.20:81,28,0	1/1:10,0:19:30.03:96,30,0	1/1:0,0:8:11.74:34,12,0	1/1:3,9:12:26.92:215,27,0	1/1:1,12:13:26.90:214,27,0	1/1:3,6:9:17.97:146,18,0	1/1:3,13:16:35.94:295,36,0	1/1:5,1:13:21.76:79,22,0	1/1:12,0:21:11.08:55,11,0	1/1:0,0:8:16.30:48,16,0
chr10	89893426	.	AAAG	A	2058.83	PASS	AB=0.987;AC=17;AF=0.304;AN=56;BaseQRankSum=2.679;DP=615;FS=0.000;HRun=0;HaplotypeScore=175.5322;InbreedingCoeff=0.5505;MQ=73.58;MQ0=19;MQRankSum=-9.025;QD=7.68;ReadPosRankSum=0.205;VQSLOD=2.9526;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:21.76:0,22,85	0/0:7,0:7:10.63:0,11,30	0/1:90,0:33:46.61:47,0,396	0/0:90,0:32:17.30:0,17,357	0/0:28,0:28:63.44:0,63,578	1/1:19,2:21:24.54:381,25,0	0/1:14,0:14:7.15:188,0,7	1/1:28,1:29:14.03:364,14,0	0/0:17,0:17:32.74:0,33,267	0/0:23,0:23:65.60:0,66,523	0/0:8,0:8:23.93:0,24,210	0/0:10,0:10:23.90:0,24,186	0/0:13,0:13:27.66:0,28,216	0/0:15,0:15:27.74:0,28,253	0/1:14,0:14:14.45:14,0,52	0/0:11,0:11:32.50:0,32,225	0/0:18,0:18:27.39:0,27,98	0/0:28,0:28:30.06:0,30,427	0/1:27,0:25:99:236,0,117	1/1:20,2:22:10.13:329,10,0	1/1:8,0:8:17.82:124,18,0	0/0:12,0:12:34.62:0,35,263	0/0:14,0:14:33.40:0,33,248	0/0:10,0:10:18.89:0,19,131	0/0:18,0:18:47.68:0,48,379	0/1:13,1:14:52.01:152,0,52	1/1:17,0:17:39.70:285,40,0	1/1:12,0:12:5.51:128,6,0
chr10	89893427	.	AAG	A	885.19	PASS	AB=0.988;AC=22;AF=0.393;AN=56;BaseQRankSum=7.063;DP=618;FS=33.231;HRun=0;HaplotypeScore=171.8803;InbreedingCoeff=0.3124;MQ=73.38;MQ0=19;MQRankSum=-9.376;QD=2.53;ReadPosRankSum=2.594;VQSLOD=1.4786;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,1:23:37.06:230,37,0	1/1:7,0:7:15.14:62,15,0	0/1:91,0:33:8.27:8,0,332	0/0:93,0:32:31.49:0,31,310	0/0:28,0:28:39.22:0,39,299	1/1:21,0:21:8.20:135,8,0	0/1:14,0:14:5.01:5,0,33	0/1:28,1:29:33.59:55,0,34	0/0:17,0:17:28.25:0,28,135	0/0:23,0:23:56.40:0,56,300	0/0:8,0:8:22.12:0,22,127	0/0:9,0:9:22.21:0,22,119	0/0:13,0:13:22.29:0,22,95	0/1:14,1:15:30.10:30,0,104	1/1:12,2:14:3.11:164,3,0	0/0:11,0:11:30.58:0,31,146	1/1:18,0:18:4.58:113,5,0	0/1:28,0:28:34.51:35,0,179	0/1:27,0:25:13.22:13,0,156	0/1:22,0:22:15.41:121,0,15	1/1:9,0:9:4.48:11,4,0	0/0:12,0:12:22.55:0,23,123	0/0:14,0:14:29.73:0,30,139	0/0:10,0:10:4.41:0,4,59	0/0:18,0:18:40.86:0,41,206	0/1:15,0:15:7.52:8,0,86	1/1:17,0:17:15.68:78,16,0	0/0:12,0:12:3.86:0,4,25
chr10	89893442	.	AGGG	A	4922.46	PASS	AB=0.924;AC=28;AF=0.500;AN=56;BaseQRankSum=3.931;DP=605;FS=0.000;HRun=7;HaplotypeScore=164.5579;InbreedingCoeff=0.6869;MQ=61.28;MQ0=20;MQRankSum=-10.542;QD=19.30;ReadPosRankSum=-0.799;VQSLOD=1.0233;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,2:21:48.32:394,48,0	1/1:4,2:6:8.72:98,9,0	0/0:90,0:24:45.13:0,45,704	0/0:93,0:26:30.85:0,31,518	0/0:22,0:24:33.32:0,33,353	1/1:13,5:18:51.50:483,52,0	1/1:9,4:13:32.77:313,33,0	1/1:13,12:25:52.59:652,53,0	0/0:16,0:17:28.18:0,28,213	0/0:20,0:20:54.17:0,54,1026	0/0:10,0:10:27.08:0,27,524	0/0:13,0:13:23.43:0,23,192	0/1:10,0:10:1.63:2,0,112	0/0:14,0:17:3.63:0,4,134	1/1:14,3:17:40.89:409,41,0	0/0:11,0:11:33.11:0,33,706	1/1:15,3:18:21.38:418,21,0	0/0:28,0:30:61.24:0,61,465	1/1:20,7:25:40.74:429,41,0	1/1:14,7:21:59.50:570,59,0	1/1:5,2:8:12.02:157,12,0	0/1:13,0:13:11.02:11,0,147	0/1:16,1:17:9.36:9,0,191	0/0:4,0:6:0.58:0,1,77	0/0:18,0:18:45.15:0,45,968	0/1:10,4:15:27.68:378,0,28	1/1:9,3:12:24.87:245,25,0	1/1:5,7:12:27.03:358,27,0
chr10	89893446	.	G	GA	1181.52	PASS	AB=0.735;AC=12;AF=0.214;AN=56;BaseQRankSum=5.228;DP=572;FS=21.598;HRun=0;HaplotypeScore=155.8195;InbreedingCoeff=-0.0213;MQ=62.72;MQ0=20;MQRankSum=-4.961;QD=7.16;ReadPosRankSum=3.190;VQSLOD=2.1131;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,1:22:1.57:0,2,113	0/0:5,0:5:10.12:0,10,51	0/0:86,0:22:48.25:0,48,386	0/0:91,0:26:26.53:0,27,267	0/0:24,0:24:68.37:0,68,728	0/1:10,8:19:8.95:228,0,9	1/1:5,7:12:8.81:156,9,0	0/1:17,5:21:42.29:42,0,75	0/0:16,0:16:33.27:0,33,358	0/0:20,0:20:60.06:0,60,682	0/0:9,0:9:27.07:0,27,345	0/0:12,0:12:35.81:0,36,382	0/0:9,0:9:23.65:0,24,257	0/0:15,0:15:39.43:0,39,343	0/1:9,7:17:13.29:162,0,13	0/0:13,0:13:36.10:0,36,465	0/1:10,4:14:32.66:85,0,33	0/0:31,0:31:84.55:0,85,954	0/1:11,5:16:68.71:96,0,69	0/1:10,11:23:10.79:272,0,11	0/1:4,1:5:4.47:21,0,4	0/0:14,0:14:38.40:0,38,366	0/0:15,1:16:32.68:0,33,396	0/0:6,0:6:14.70:0,15,150	0/0:18,0:18:48.15:0,48,645	0/1:7,7:14:31.69:165,0,32	0/1:6,5:11:31.47:76,0,31	0/1:8,2:10:25.79:32,0,26
chr10	89893447	.	G	GA	1309.22	PASS	AB=0.991;AC=15;AF=0.268;AN=56;BaseQRankSum=4.212;DP=574;FS=18.891;HRun=0;HaplotypeScore=156.0038;InbreedingCoeff=-0.1817;MQ=62.87;MQ0=20;MQRankSum=-4.818;QD=5.84;ReadPosRankSum=2.988;VQSLOD=2.4543;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:10.41:10,0,70	0/0:5,0:5:10.46:0,10,45	0/0:84,0:22:39.31:0,39,377	0/0:88,1:26:25.91:0,26,291	0/0:23,1:24:32.27:0,32,235	0/1:19,0:19:12.30:227,0,12	1/1:14,0:13:2.19:157,2,0	0/1:22,0:21:50.61:51,0,93	0/1:15,1:16:9.68:10,0,93	0/0:20,0:20:56.09:0,56,631	0/0:8,0:8:24.07:0,24,320	0/0:12,0:12:22.45:0,22,115	0/0:10,0:10:19.27:0,19,115	0/0:15,0:15:12.91:0,13,87	0/1:17,0:17:7.17:193,0,7	0/0:13,0:13:36.10:0,36,465	0/1:15,0:15:27.73:89,0,28	0/0:29,1:30:34.68:0,35,278	0/1:19,0:18:67.82:106,0,68	0/1:24,0:24:10.17:291,0,10	0/1:5,0:5:7.79:20,0,8	0/0:14,0:14:11.47:0,11,116	0/1:15,1:16:20.27:20,0,118	0/0:6,0:6:6.83:0,7,56	0/0:18,0:18:48.15:0,48,647	0/1:14,0:14:44.08:158,0,44	0/1:11,0:11:27.01:97,0,27	0/1:10,0:10:34.21:34,0,42
chr10	89894714	.	C	CA	5506.89	PASS	AB=0.593;AC=17;AF=0.304;AN=56;BaseQRankSum=-13.549;DP=657;FS=6.527;HRun=8;HaplotypeScore=70.2210;InbreedingCoeff=0.9138;MQ=80.65;MQ0=2;MQRankSum=-1.219;QD=27.95;ReadPosRankSum=-1.363;VQSLOD=4.9107;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,104,1124	0/0:12,0:12:30.01:0,30,275	0/0:46,0:30:44.24:0,44,370	0/0:43,0:27:12.59:0,13,376	0/0:19,0:19:48.02:0,48,439	1/1:3,16:19:48.14:554,48,0	1/1:1,24:25:63.19:727,63,0	1/1:4,26:30:78.22:888,78,0	0/0:19,0:19:46.29:0,46,436	0/0:29,0:29:70.56:0,71,647	0/0:27,0:27:69.01:0,69,626	0/0:16,0:16:39.01:0,39,357	0/0:18,0:18:22.69:0,23,386	0/0:10,0:10:27.01:0,27,247	0/0:16,0:16:33:0,33,301	0/0:21,0:21:51.01:0,51,467	0/0:20,0:20:57.03:0,57,522	0/0:24,0:24:63.02:0,63,577	1/1:7,18:25:48.14:546,48,0	1/1:1,25:26:75.10:821,75,0	1/1:3,15:18:42.12:485,42,0	0/0:20,0:20:54.01:0,54,490	0/0:25,0:25:63.03:0,63,577	0/0:31,0:31:90.03:0,90,818	0/0:17,0:17:48.02:0,48,439	0/1:5,11:16:13.99:344,0,14	1/1:1,24:24:65.77:761,66,0	1/1:2,11:13:33.10:381,33,0
chr10	89896167	.	T	TCATA	3838.03	PASS	AB=0.828;AC=21;AF=0.457;AN=46;BaseQRankSum=-8.766;DP=782;FS=6.747;HRun=0;HaplotypeScore=134.9709;InbreedingCoeff=0.4528;MQ=64.98;MQ0=7;MQRankSum=7.082;QD=10.05;ReadPosRankSum=1.513;VQSLOD=2.8067;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,11:44:21.07:466,21,0	0/0:9,0:9:8.87:0,9,112	./.	./.	0/0:15,0:23:3.89:0,4,30	1/1:24,0:24:12:142,12,0	1/1:42,0:42:2.99:24,3,0	./.	0/0:18,0:27:15.02:0,15,140	0/1:18,5:24:23.84:263,0,24	1/1:17,4:21:9.03:190,9,0	0/0:30,0:43:20.96:0,21,185	0/0:24,0:36:20.64:0,21,175	0/0:14,0:28:15.02:0,15,140	0/0:33,0:34:33.07:0,33,420	1/1:26,13:40:24.08:551,24,0	0/0:25,0:25:24.05:0,24,301	./.	1/1:15,0:15:6.01:94,6,0	0/1:24,4:29:51.78:194,0,52	0/1:31,11:43:2.85:458,0,3	0/0:13,0:18:6.01:0,6,56	./.	0/0:15,0:21:8.75:0,9,58	0/1:26,2:27:55.81:126,0,56	1/1:19,14:33:15.30:728,15,0	0/1:17,7:24:26.82:326,0,27	1/1:7,8:15:12.04:276,12,0
chr10	89896448	.	T	TACAC	2497.03	PASS	AB=0.769;AC=27;AF=0.563;AN=48;BaseQRankSum=-1.556;DP=471;FS=9.354;HRun=0;HaplotypeScore=105.4381;InbreedingCoeff=0.3932;MQ=67.19;MQ0=5;MQRankSum=-2.351;QD=9.64;ReadPosRankSum=-0.598;VQSLOD=2.1256;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:8.93:0,9,90	1/1:4,0:4:6.02:100,6,0	./.	./.	1/1:8,4:14:5.69:81,6,0	0/0:8,0:11:3:0,3,28	0/0:13,0:19:1.25:0,1,49	1/1:21,0:20:1.23:2,1,0	1/1:12,4:17:2.83:70,3,0	0/1:18,1:19:13.43:403,0,13	./.	1/1:8,2:12:5.54:116,6,0	1/1:10,3:17:9.04:92,9,0	1/1:8,4:18:11.97:228,12,0	1/1:16,0:16:6.49:95,6,0	1/1:17,0:17:8.06:102,8,0	1/1:27,0:26:24.84:289,25,0	0/1:11,6:21:11.64:213,0,12	0/0:16,0:15:3:0,3,26	0/0:7,0:12:14.69:0,15,126	0/0:13,0:21:6.07:0,6,95	1/1:5,3:9:2.90:71,3,0	1/1:10,0:10:6.90:79,7,0	0/1:19,11:36:8.04:710,0,8	./.	0/0:11,0:15:14.37:0,14,107	0/0:6,0:6:2.84:0,3,14	0/0:1,0:2:3:0,3,28
chr10	89896490	.	C	CCA	1377.58	PASS	AB=0.971;AC=16;AF=0.296;AN=54;BaseQRankSum=4.156;DP=520;FS=9.880;HRun=0;HaplotypeScore=81.7831;InbreedingCoeff=0.7426;MQ=68.18;MQ0=13;MQRankSum=-0.429;QD=8.77;ReadPosRankSum=-2.431;VQSLOD=2.0515;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,2:31:9.01:111,9,0	1/1:2,0:8:8.06:88,8,0	0/0:24,0:14:15.91:0,16,371	0/0:29,0:18:33.81:0,34,381	0/0:13,0:13:14.85:0,15,136	0/0:18,0:18:29.28:0,29,374	0/0:19,0:19:36.11:0,36,440	0/0:17,0:16:39.08:0,39,488	0/0:16,0:16:22.36:0,22,301	1/1:7,17:24:51.56:759,52,0	./.	0/0:16,0:17:24.73:0,25,367	0/1:11,0:11:9.57:10,0,70	0/0:17,0:18:13.83:0,14,257	1/1:6,10:16:3.01:47,3,0	1/1:7,8:15:12.04:144,12,0	1/1:8,11:19:18.03:251,18,0	0/0:20,0:20:5.33:0,5,229	0/0:18,0:16:21.04:0,21,412	0/0:20,0:19:40.10:0,40,501	0/0:32,0:30:44.55:0,45,673	0/0:17,0:16:26.79:0,27,298	0/1:15,0:16:8.21:8,0,210	0/0:34,0:36:22.20:0,22,487	1/1:3,13:13:12.04:143,12,0	0/0:15,0:15:33.40:0,33,459	0/0:13,0:13:36.05:0,36,409	0/0:14,0:14:36.11:0,36,455
chr10	89897549	.	GA	G	6035.21	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=8.711;DP=516;FS=7.081;HRun=11;HaplotypeScore=60.5470;InbreedingCoeff=0.9358;MQ=59.04;MQ0=3;MQRankSum=-0.726;QD=17.39;ReadPosRankSum=2.414;VQSLOD=5.8455;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:29:62.89:517,63,0	1/1:0,3:3:8.99:74,9,0	0/0:5,1:3:5.99:0,6,53	0/0:8,0:6:9:0,9,86	0/0:23,0:23:60.09:0,60,614	1/1:1,24:25:65.92:542,66,0	1/1:0,16:16:35.96:296,36,0	1/1:4,24:30:37.99:496,38,0	0/0:8,0:8:15.04:0,15,160	1/1:4,13:17:35.94:296,36,0	1/1:1,20:20:19.11:361,19,0	0/0:17,0:17:45.58:0,46,474	0/0:15,0:15:27.95:0,28,283	0/0:11,2:13:2.53:0,3,231	1/1:4,16:20:35.95:295,36,0	1/1:1,16:17:35.83:296,36,0	1/1:5,28:36:49.03:577,49,0	0/0:21,0:20:51.13:0,51,543	1/1:7,14:21:38.91:319,39,0	1/1:2,15:18:40.98:326,41,0	1/1:4,17:21:27.89:393,28,0	0/0:14,0:14:33.04:0,33,339	0/0:19,0:19:42.11:0,42,447	0/0:23,2:25:19.88:0,20,612	1/1:2,21:22:47.93:394,48,0	1/1:3,20:23:27.97:436,28,0	1/1:4,13:17:26.95:222,27,0	1/1:2,8:10:23.96:197,24,0
chr10	89897722	.	GA	G	2525.97	PASS	AB=0.686;AC=19;AF=0.339;AN=56;BaseQRankSum=2.511;DP=588;FS=0.000;HRun=13;HaplotypeScore=70.7565;InbreedingCoeff=0.5959;MQ=66.99;MQ0=1;MQRankSum=-1.123;QD=9.25;ReadPosRankSum=2.156;VQSLOD=2.9810;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,18:29:5.68:258,0,6	0/0:9,0:11:14.67:0,15,105	0/0:9,0:8:11.23:0,11,91	0/0:17,0:15:3.11:0,3,21	0/0:28,2:31:24.87:0,25,511	1/1:9,8:18:27.56:186,28,0	0/1:4,11:16:0.29:152,0,0	1/1:10,24:35:36.74:424,37,0	0/0:19,1:21:28.28:0,28,447	0/0:10,0:27:52.63:0,53,297	0/0:11,0:21:35.57:0,36,235	0/0:16,0:16:34.28:0,34,315	0/0:20,1:21:23.38:0,23,373	0/0:17,3:21:9.98:0,10,370	0/0:24,0:26:52.55:0,53,500	0/0:5,0:23:45.92:0,46,262	0/1:22,4:26:27.61:28,0,392	0/1:17,3:23:25.52:26,0,308	1/1:2,17:21:37.46:362,37,0	1/1:10,20:30:5.51:340,6,0	1/1:5,11:19:4.72:180,5,0	0/0:19,0:19:11.25:0,11,266	0/0:9,0:9:13.56:0,14,112	0/0:23,1:25:34.96:0,35,463	0/0:9,0:18:17.52:0,18,123	1/1:4,18:22:27.45:365,27,0	1/1:7,16:24:37.76:268,38,0	0/1:2,8:10:5.31:129,0,5
chr10	89898200	.	TGG	T	4849.22	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-0.563;DP=399;FS=12.640;HRun=12;HaplotypeScore=59.1108;InbreedingCoeff=0.8894;MQ=76.91;MQ0=0;MQRankSum=-0.190;QD=20.29;ReadPosRankSum=6.933;VQSLOD=2.2074;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:29:62.25:639,62,0	1/1:2,4:7:14.74:124,15,0	0/0:12,0:14:7.79:0,8,61	0/0:12,0:12:11.11:0,11,144	0/0:12,0:15:19.48:0,19,145	1/1:6,9:15:27.05:275,27,0	1/1:2,12:15:35.82:348,36,0	1/1:4,7:11:18.01:183,18,0	0/0:13,0:15:20.55:0,21,258	0/0:9,0:9:6.48:0,6,72	0/0:5,0:6:11.99:0,12,103	0/0:6,0:6:6.02:0,6,89	0/0:12,0:12:9.02:0,9,113	0/0:9,0:11:14:0,14,131	1/1:2,23:25:54.12:549,54,0	0/0:11,0:11:15.04:0,15,195	1/1:6,18:25:53.80:531,54,0	0/0:5,0:11:23.76:0,24,115	1/1:4,11:17:41.49:377,41,0	1/1:2,18:21:50.80:500,51,0	1/1:7,16:23:45.06:458,45,0	0/0:6,0:6:0:0,0,0	0/0:12,0:12:9:0,9,95	0/0:10,0:11:21.06:0,21,293	0/0:6,0:9:8.51:0,9,84	1/1:11,12:23:29.94:305,30,0	1/1:6,15:22:44.81:439,45,0	1/1:0,5:5:12.03:122,12,0
chr10	89898397	.	G	GAA	4725.89	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=-11.098;DP=549;FS=3.926;HRun=12;HaplotypeScore=95.3788;InbreedingCoeff=0.8272;MQ=65.49;MQ0=3;MQRankSum=0.360;QD=17.50;ReadPosRankSum=-2.838;VQSLOD=3.6407;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,2:41:17.77:237,18,0	0/0:3,0:10:19.21:0,19,96	0/0:33,0:17:22.14:0,22,165	0/0:19,0:12:7.12:0,7,57	0/0:18,0:21:38.30:0,38,371	1/1:1,12:18:32.07:369,32,0	1/1:4,12:20:43.07:479,43,0	1/1:7,21:32:72.19:920,72,0	0/0:15,0:16:26.84:0,27,287	0/1:3,0:14:15.11:15,0,54	0/1:4,0:18:7.38:7,0,104	0/0:18,0:20:32.36:0,32,272	0/0:13,0:14:26.73:0,27,233	0/0:11,0:12:23.89:0,24,264	0/0:2,0:22:49.39:0,49,213	0/0:0,0:17:15.24:0,15,131	0/0:0,0:13:32.87:0,33,141	0/0:24,0:26:65.49:0,65,577	1/1:6,18:26:66.15:830,66,0	1/1:6,24:32:55.59:672,56,0	1/1:4,6:10:18.02:230,18,0	0/0:10,0:10:29.97:0,30,267	0/0:17,0:18:35.84:0,36,366	0/0:18,0:18:45.91:0,46,418	0/0:1,0:10:21.48:0,21,90	1/1:7,13:23:44.70:488,45,0	1/1:3,16:22:7.06:332,7,0	1/1:5,8:14:11.99:146,12,0
chr10	89900539	.	GT	G	6975.80	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=1.927;DP=643;FS=15.707;HRun=1;HaplotypeScore=115.1483;InbreedingCoeff=-0.0958;MQ=76.51;MQ0=0;MQRankSum=-4.550;QD=10.85;ReadPosRankSum=6.991;VQSLOD=1.3302;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:39:95.48:470,95,0	1/1:11,0:11:22.47:113,22,0	0/1:17,0:17:49.23:49,0,97	0/1:20,0:19:49.78:50,0,50	0/1:20,0:20:4.39:157,0,4	0/1:14,0:14:16.27:91,0,16	1/1:20,0:20:25.25:196,25,0	1/1:15,0:15:8.63:115,9,0	1/1:35,0:35:70.94:413,71,0	1/1:19,1:20:19.65:163,20,0	1/1:13,0:13:9.27:137,9,0	0/1:25,0:25:6.67:200,0,7	1/1:28,0:28:72.30:340,72,0	1/1:26,0:26:69.79:352,70,0	1/1:30,2:32:83.37:431,83,0	1/1:29,0:29:71.95:342,72,0	1/1:29,0:29:77.70:359,78,0	1/1:30,0:30:80.41:380,80,0	1/1:11,0:11:29.19:124,29,0	1/1:17,1:18:44.57:230,45,0	1/1:66,0:66:99:692,114,0	1/1:20,0:20:9.48:206,9,0	1/1:23,0:23:61.81:311,62,0	1/1:32,0:32:86.83:417,87,0	1/1:20,0:20:45.48:248,45,0	1/1:11,0:11:28.64:122,29,0	1/1:11,0:11:31.50:174,32,0	1/1:8,0:8:19.59:94,20,0
chr10	89902248	.	T	TC	1054.73	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-7.720;DP=306;FS=37.094;HRun=7;HaplotypeScore=58.5870;InbreedingCoeff=0.8314;MQ=88.86;MQ0=0;MQRankSum=-3.218;QD=16.23;ReadPosRankSum=-1.845;VQSLOD=1.0975;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:5.99:0,6,58	0/0:5,0:5:9.01:0,9,86	0/0:15,0:15:17.95:0,18,153	0/0:19,0:19:28.82:0,29,306	0/0:10,0:10:11.96:0,12,106	1/1:1,9:10:18.05:214,18,0	1/1:3,10:13:27.08:326,27,0	1/1:5,8:13:21.06:252,21,0	0/0:12,0:12:33.05:0,33,319	0/0:22,0:22:51.07:0,51,491	0/0:6,0:6:15.02:0,15,145	0/0:21,0:21:51.07:0,51,492	0/0:6,0:6:18.03:0,18,174	0/0:8,0:8:15.02:0,15,140	0/0:8,0:8:21.03:0,21,203	0/0:14,0:13:33.04:0,33,319	0/0:15,0:15:36.05:0,36,347	0/0:24,0:24:57.08:0,57,550	1/1:3,1:4:3.01:36,3,0	1/1:2,2:4:8.96:90,9,0	1/1:3,9:13:15.05:181,15,0	0/0:4,0:4:9.01:0,9,85	0/0:4,0:4:12.02:0,12,114	0/0:18,0:18:45.06:0,45,435	0/0:18,0:18:33.02:0,33,315	1/1:1,2:3:6.02:72,6,0	1/1:0,4:4:3.01:36,3,0	1/1:0,1:1:3.01:36,3,0
chr10	89902572	.	C	CCTT	27573.90	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.562;DP=551;FS=14.628;HRun=0;HaplotypeScore=67.9789;InbreedingCoeff=0.9199;MQ=63.64;MQ0=0;MQRankSum=-5.579;QD=51.64;ReadPosRankSum=4.276;VQSLOD=6.1180;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,31:35:78.22:1681,78,0	1/1:0,5:5:15.05:340,15,0	0/0:7,0:7:18.06:0,18,241	0/0:10,0:10:5.77:0,6,194	1/1:1,17:19:48.16:1086,48,0	1/1:0,17:18:51.18:1154,51,0	1/1:5,22:27:57.19:1289,57,0	1/1:2,21:23:63.20:1275,63,0	1/1:1,21:23:54.19:1221,54,0	1/1:1,20:23:56.77:1106,57,0	1/1:0,14:15:35.99:682,36,0	1/1:3,22:25:57.19:1278,57,0	1/1:0,20:20:54.19:1222,54,0	1/1:2,23:26:48.16:1087,48,0	1/1:1,12:14:36.08:766,36,0	1/1:0,13:13:30.10:679,30,0	1/1:2,29:31:81.28:1833,81,0	1/1:1,22:24:63.22:1426,63,0	1/1:1,26:28:81.25:1687,81,0	1/1:0,8:9:21:381,21,0	1/1:2,30:33:66.18:1445,66,0	1/1:1,10:11:24.08:543,24,0	1/1:0,11:14:27.05:558,27,0	1/1:2,21:25:45.15:1017,45,0	1/1:1,19:20:42.10:902,42,0	1/1:0,29:30:90.26:1762,90,0	1/1:4,13:17:33.11:746,33,0	1/1:0,6:6:18.06:407,18,0
chr10	89903981	.	GC	G	4014.53	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.668;DP=457;FS=8.922;HRun=5;HaplotypeScore=55.7563;InbreedingCoeff=0.9662;MQ=75.15;MQ0=0;MQRankSum=-1.659;QD=28.88;ReadPosRankSum=2.214;VQSLOD=3.8110;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.20:0,72,942	0/0:5,0:5:15.05:0,15,205	0/0:11,0:11:28.85:0,29,318	0/0:6,0:6:18.06:0,18,228	1/1:0,3:3:6.02:68,6,0	0/0:17,0:17:42.13:0,42,558	0/0:20,0:20:57.16:0,57,745	0/0:11,0:11:24.08:0,24,328	1/1:3,18:21:48.14:544,48,0	0/0:11,0:11:33.11:0,33,450	0/0:8,0:8:18.06:0,18,246	1/1:0,20:20:57.16:646,57,0	1/1:4,6:10:15.04:170,15,0	1/1:2,14:16:39.11:442,39,0	0/0:20,0:20:57.19:0,57,779	0/0:12,0:12:36.12:0,36,491	0/0:29,0:29:84.27:0,84,1134	1/1:0,22:22:63.18:715,63,0	0/0:16,0:16:45.13:0,45,597	0/0:4,0:4:12.04:0,12,164	0/0:69,0:69:99:0,199,2695	1/1:1,8:9:15.04:170,15,0	1/1:0,7:7:18.03:204,18,0	1/1:0,31:31:93.27:1055,93,0	0/0:10,0:10:30.09:0,30,394	0/0:18,0:18:45.13:0,45,582	0/0:16,0:16:45.14:0,45,599	0/0:8,0:8:21.07:0,21,287
chr10	89906443	.	C	CCA	14363.11	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-15.430;DP=523;FS=16.777;HRun=0;HaplotypeScore=59.2365;InbreedingCoeff=0.9911;MQ=88.74;MQ0=1;MQRankSum=-2.845;QD=44.61;ReadPosRankSum=3.710;VQSLOD=5.0292;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.12:0,78,975	0/0:5,0:5:12.04:0,12,167	0/0:23,0:23:54.13:0,54,705	0/0:19,0:19:45.15:0,45,614	1/1:3,8:11:24.08:415,24,0	1/1:1,9:10:24.08:432,24,0	1/1:2,20:22:54.19:972,54,0	1/1:4,24:29:75.19:1239,75,0	1/1:0,18:18:51.17:918,51,0	0/0:17,0:17:42.13:0,42,570	0/0:5,0:5:15.05:0,15,209	1/1:1,21:22:54.17:972,54,0	1/1:3,15:18:45.15:810,45,0	1/1:3,17:20:48.16:860,48,0	0/0:30,0:29:84.27:0,84,1161	0/0:23,0:23:66.22:0,66,921	0/0:38,0:38:99:0,111,1553	1/1:1,25:26:66.23:1176,66,0	1/1:0,12:13:39.11:670,39,0	1/1:3,6:9:18.06:324,18,0	1/1:5,22:27:63.22:1134,63,0	1/1:2,16:20:42.14:756,42,0	1/1:0,17:16:48.16:864,48,0	1/1:1,19:20:51.17:918,51,0	0/0:12,0:12:29.82:0,30,350	1/1:2,10:12:33.11:558,33,0	1/1:0,16:16:42.14:756,42,0	1/1:2,10:12:33.11:590,33,0
chr10	89907450	.	AT	A	503.51	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=7.233;DP=459;FS=7.292;HRun=8;HaplotypeScore=35.3856;InbreedingCoeff=0.8952;MQ=51.94;MQ0=9;MQRankSum=-3.524;QD=17.36;ReadPosRankSum=-0.027;VQSLOD=2.5542;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:30:31.34:0,31,365	1/1:0,2:2:6.01:58,6,0	./.	./.	0/0:29,0:28:69.16:0,69,807	0/0:23,0:22:50.83:0,51,591	0/0:9,0:9:9.03:0,9,109	0/0:30,0:26:72.19:0,72,838	0/0:15,0:15:18.06:0,18,217	0/0:24,0:22:54.16:0,54,642	0/0:16,0:16:48.10:0,48,553	0/0:12,0:12:18.01:0,18,193	0/0:11,0:11:17.92:0,18,196	0/0:16,0:16:21.05:0,21,243	1/1:1,10:10:27.04:260,27,0	0/0:13,0:11:24.06:0,24,278	1/1:1,15:15:33.05:318,33,0	0/0:19,0:19:21.06:0,21,254	0/0:9,0:9:27:0,27,307	0/0:29,0:29:75.21:0,75,885	0/0:14,0:14:9.03:0,9,107	0/0:12,0:12:36.11:0,36,435	0/0:15,0:14:33.09:0,33,382	0/0:13,0:12:18.04:0,18,205	0/0:29,0:29:78.19:0,78,915	0/0:19,0:19:57.17:0,57,689	0/0:18,0:18:42.13:0,42,507	0/0:7,0:7:12.04:0,12,145
chr10	89907695	.	CAA	C	8231.09	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-10.839;DP=611;FS=1.765;HRun=12;HaplotypeScore=89.3792;InbreedingCoeff=0.9101;MQ=69.94;MQ0=7;MQRankSum=0.422;QD=21.16;ReadPosRankSum=2.326;VQSLOD=4.6422;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,31:37:83.66:833,84,0	0/0:6,0:6:18.03:0,18,245	0/0:51,0:32:2.01:0,2,355	0/0:50,0:21:23.82:0,24,236	1/1:4,17:20:36.05:366,36,0	1/1:2,15:17:36.07:366,36,0	1/1:0,21:21:54.12:549,54,0	1/1:9,23:33:24.13:661,24,0	1/1:5,16:19:42.06:427,42,0	0/0:4,1:16:32.44:0,32,115	0/0:1,0:9:9.98:0,10,36	1/1:2,24:25:53.85:601,54,0	1/1:4,16:19:41.88:427,42,0	1/1:3,12:16:35.80:347,36,0	0/0:18,0:18:48.07:0,48,629	0/0:2,0:14:32.83:0,33,150	0/0:32,0:36:87.49:0,87,1134	1/1:3,20:23:57.12:580,57,0	1/1:2,11:12:30.06:305,30,0	1/1:5,13:18:26.42:324,26,0	1/1:4,13:18:0.25:294,0,0	1/1:0,9:9:24.05:244,24,0	1/1:1,8:10:11.14:174,11,0	1/1:5,27:32:66.13:671,66,0	0/0:4,0:19:27.45:0,27,97	1/1:4,13:16:39.07:391,39,0	1/1:5,17:23:47.82:466,48,0	1/1:2,10:13:14.75:205,15,0
chr10	89907966	.	C	CGTGT	3706.72	PASS	AB=0.693;AC=40;AF=0.769;AN=52;BaseQRankSum=-1.675;DP=512;FS=0.000;HRun=0;HaplotypeScore=109.4639;InbreedingCoeff=0.5163;MQ=52.30;MQ0=13;MQRankSum=-2.366;QD=10.07;ReadPosRankSum=-3.246;VQSLOD=2.2039;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:52:48.05:0,48,445	1/1:2,3:7:8.77:154,9,0	./.	./.	1/1:17,0:15:2.64:47,3,0	0/1:11,9:21:27.02:316,0,27	1/1:21,5:27:14.12:237,14,0	1/1:20,0:20:5.81:84,6,0	1/1:10,0:19:6.49:105,6,0	0/0:27,0:28:21.06:0,21,302	0/0:9,0:9:9.01:0,9,111	1/1:11,0:17:6.02:104,6,0	1/1:17,1:23:15.05:243,15,0	1/1:8,0:13:8.99:124,9,0	1/1:10,2:14:3.01:71,3,0	0/0:17,0:18:15.03:0,15,323	1/1:7,8:17:15.05:354,15,0	1/1:20,0:18:21.06:323,21,0	1/1:8,6:15:18.03:276,18,0	0/1:10,7:17:13.97:199,0,14	1/1:15,7:26:5.61:69,6,0	1/1:9,0:8:6.01:78,6,0	1/1:8,4:10:2.82:71,3,0	1/1:15,0:27:3.01:52,3,0	0/0:10,0:12:8.92:0,9,122	1/1:8,2:11:10.28:154,10,0	1/1:9,4:20:27.19:475,27,0	1/1:4,1:11:14.25:170,14,0
chr10	89908615	.	CT	C	5533.39	PASS	AB=0.956;AC=53;AF=0.946;AN=56;BaseQRankSum=-4.384;DP=473;FS=0.760;HRun=5;HaplotypeScore=79.1899;InbreedingCoeff=0.4743;MQ=72.29;MQ0=6;MQRankSum=-3.519;QD=13.14;ReadPosRankSum=4.360;VQSLOD=3.1597;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:15.87:106,16,0	1/1:6,0:6:14.43:82,14,0	0/0:52,0:20:33.25:0,33,347	0/1:41,1:20:44.17:44,0,114	1/1:11,5:16:29.59:292,30,0	1/1:14,4:18:35.09:302,35,0	1/1:4,15:19:38.99:385,39,0	1/1:7,20:27:62.97:604,63,0	1/1:1,6:7:12.03:136,12,0	1/1:25,0:25:38.13:260,38,0	1/1:19,0:19:22.98:146,23,0	1/1:15,1:16:23.49:198,23,0	1/1:1,14:15:20.99:224,21,0	1/1:5,1:6:17.98:165,18,0	1/1:20,0:20:37.88:234,38,0	1/1:8,0:8:5.26:69,5,0	1/1:12,0:12:18.37:84,18,0	1/1:4,9:13:15:203,15,0	1/1:4,10:15:38.90:363,39,0	1/1:1,14:15:26.95:273,27,0	1/1:7,3:10:23.83:210,24,0	1/1:3,0:3:5.63:30,6,0	1/1:2,16:18:30.08:348,30,0	1/1:8,3:11:14.34:80,14,0	1/1:9,0:9:17.06:104,17,0	1/1:5,13:18:35.28:312,35,0	1/1:2,18:19:20.78:211,21,0	1/1:0,7:7:6.02:70,6,0
chr10	89908618	.	T	TA	960.45	PASS	AB=0.823;AC=16;AF=0.286;AN=56;BaseQRankSum=-5.361;DP=482;FS=10.959;HRun=0;HaplotypeScore=101.5550;InbreedingCoeff=0.3385;MQ=71.52;MQ0=8;MQRankSum=2.196;QD=5.34;ReadPosRankSum=-0.844;VQSLOD=2.6926;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:5,23:30:6.90:174,0,7	0/1:2,5:7:1.50:43,0,1	0/0:54,0:19:17.18:0,17,413	0/0:43,0:20:1.01:0,1,177	0/0:16,0:16:15.31:0,15,53	0/0:19,0:19:12.54:0,13,38	0/0:17,0:20:29.95:0,30,118	0/0:23,0:24:33.20:0,33,112	0/0:7,0:7:9.83:0,10,36	1/1:9,17:26:11.55:300,12,0	1/1:4,17:21:18.96:250,19,0	0/0:16,0:16:6.89:0,7,19	0/1:14,0:15:0.40:0,0,29	0/0:6,0:6:9.22:0,9,29	1/1:12,1:20:17.48:116,17,0	0/1:7,1:8:25.20:51,0,25	1/1:4,3:13:8.15:94,8,0	0/0:12,0:12:20.34:0,20,84	0/0:13,0:15:5.08:0,5,75	0/0:14,0:14:18.21:0,18,61	0/1:9,0:9:11.32:11,0,18	0/1:4,0:4:0.11:0,0,0	0/0:17,0:18:26.82:0,27,101	0/0:11,0:11:3.66:0,4,9	0/1:5,7:12:11.72:40,0,12	0/1:14,1:15:16.51:44,0,17	0/0:19,0:19:20.89:0,21,94	0/0:7,0:7:4.74:0,5,16
chr10	89908619	.	T	TAA	1419.15	PASS	AB=0.974;AC=22;AF=0.393;AN=56;BaseQRankSum=-6.048;DP=495;FS=8.848;HRun=13;HaplotypeScore=111.8916;InbreedingCoeff=0.4596;MQ=70.27;MQ0=10;MQRankSum=1.394;QD=6.34;ReadPosRankSum=-3.247;VQSLOD=-0.2158;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,1:31:33.31:286,33,0	1/1:7,0:7:5.88:37,6,0	0/0:55,0:18:26.75:0,27,216	0/0:42,0:19:11.72:0,12,70	0/1:16,0:16:10.62:11,0,27	0/1:19,0:19:4.49:4,0,32	0/0:20,0:20:22.74:0,23,171	0/0:25,0:25:9.52:0,10,123	0/0:8,0:8:5.36:0,5,36	1/1:27,0:27:34.31:346,34,0	1/1:21,0:21:20.83:183,21,0	0/1:16,0:16:3.89:4,0,9	0/0:15,0:15:17.03:0,17,89	0/0:6,0:6:5.86:0,6,35	1/1:20,0:20:29.81:339,30,0	0/1:9,2:11:25.15:100,0,25	1/1:14,1:15:20.73:209,21,0	0/0:12,0:12:20.12:0,20,118	0/0:15,0:15:14.67:0,15,115	0/0:15,0:15:17.46:0,17,91	0/0:8,0:8:8.73:0,9,54	1/1:3,0:3:2.50:9,2,0	0/0:18,0:18:24.67:0,25,122	1/1:11,0:11:2.50:9,2,0	0/1:12,0:12:11.08:29,0,11	0/1:15,0:15:38.16:38,0,47	0/0:20,0:19:19.08:0,19,101	0/0:7,0:7:5.78:0,6,31
chr10	89908631	.	A	AGGAGGAAGAGGAGGAGGAAGAGG	35053.28	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-7.512;DP=539;FS=1.387;HRun=0;HaplotypeScore=264.4976;InbreedingCoeff=0.8706;MQ=60.49;MQ0=12;MQRankSum=-7.259;QD=118.42;ReadPosRankSum=4.413;VQSLOD=4.4309;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:49:0,49,1674	0/0:5,0:5:6.02:0,6,360	0/0:60,0:15:32.70:0,33,316	0/0:43,0:18:13.76:0,14,314	1/1:9,2:19:35.70:1762,36,0	1/1:10,2:21:29.09:2318,29,0	1/1:22,0:22:51.07:2613,51,0	1/1:33,0:30:61.98:2111,62,0	1/1:15,0:15:45.15:3176,45,0	0/0:28,0:28:80.78:0,81,3061	0/0:20,0:20:53.86:0,54,1728	1/1:8,1:17:26.99:2023,27,0	1/1:24,0:24:48.03:3273,48,0	1/1:6,0:6:17.65:850,18,0	0/0:15,0:15:33.97:0,34,1073	0/0:11,0:11:30.07:0,30,1044	0/0:17,0:17:30.97:0,31,866	1/1:16,0:16:35.41:2134,35,0	1/1:18,0:18:54.17:2467,54,0	1/1:18,0:18:42.05:2436,42,0	1/1:12,0:12:23.45:580,23,0	1/1:1,1:4:6.01:634,6,0	1/1:19,0:20:57.19:3619,57,0	1/1:9,1:10:17.97:1051,18,0	0/0:12,0:12:18.05:0,18,463	0/1:13,0:13:99:1783,0,133	1/1:20,0:19:23.97:1982,24,0	1/1:8,0:8:6.02:241,6,0
chr10	89908812	.	G	GAAA	2535.45	PASS	AB=0.776;AC=10;AF=0.179;AN=56;BaseQRankSum=7.184;DP=429;FS=3.583;HRun=3;HaplotypeScore=83.9238;InbreedingCoeff=-0.2118;MQ=50.78;MQ0=5;MQRankSum=0.547;QD=17.98;ReadPosRankSum=2.252;VQSLOD=0.7946;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:53.57:0,54,792	0/0:5,0:5:14.94:0,15,239	0/0:21,0:12:29.85:0,30,425	0/0:13,0:8:17.78:0,18,212	0/0:23,0:23:10.52:0,11,354	0/1:5,11:16:14.37:589,0,14	0/1:13,1:13:12.92:13,0,169	0/0:13,0:12:6.90:0,7,158	0/0:19,0:19:53.59:0,54,433	0/0:14,0:14:42.13:0,42,703	0/0:21,0:21:63.22:0,63,1103	0/0:14,0:14:41.93:0,42,360	0/1:14,0:14:2.80:3,0,214	0/0:6,0:6:17.94:0,18,149	0/0:19,0:18:51.17:0,51,934	0/0:18,0:18:54.14:0,54,964	0/0:26,0:26:63.04:0,63,979	0/0:22,0:22:20.30:0,20,356	0/1:10,4:13:60.93:269,0,61	0/1:14,6:19:81.45:463,0,81	0/1:2,1:3:35.19:38,0,35	0/0:3,0:3:8.96:0,9,70	0/0:13,0:13:11.68:0,12,236	0/1:12,2:14:99:158,0,119	0/0:17,0:17:51.17:0,51,906	0/1:10,11:20:59.29:555,0,59	0/1:9,10:18:23.87:533,0,24	0/1:4,2:6:55.28:55,0,63
chr10	89908813	.	G	GA	686.53	PASS	AB=0.732;AC=8;AF=0.143;AN=56;BaseQRankSum=10.853;DP=431;FS=1.088;HRun=2;HaplotypeScore=76.1153;InbreedingCoeff=-0.1526;MQ=50.87;MQ0=5;MQRankSum=-2.847;QD=5.92;ReadPosRankSum=4.675;VQSLOD=0.9266;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:40.90:0,41,499	0/0:5,0:5:14.84:0,15,162	0/0:21,0:13:23.85:0,24,261	0/0:13,0:7:8.94:0,9,91	0/0:23,0:23:54.27:0,54,266	0/1:5,11:16:18.91:198,0,19	0/0:13,1:13:20.45:0,20,165	0/0:13,0:12:33.37:0,33,162	0/0:19,0:19:52.57:0,53,324	0/0:15,0:15:42.13:0,42,518	0/0:21,0:21:63.20:0,63,780	0/0:14,0:14:41.22:0,41,259	0/0:14,0:14:34.99:0,35,218	0/0:6,0:6:17.52:0,18,111	0/0:19,0:18:51.16:0,51,631	0/0:18,0:18:51.16:0,51,632	0/0:25,0:25:60.16:0,60,723	0/0:22,0:22:51.89:0,52,273	0/1:10,4:13:42.01:81,0,42	0/1:15,6:20:62.34:153,0,62	0/1:2,0:3:7.32:7,0,29	0/0:3,0:3:8.61:0,9,48	0/0:14,0:14:36.14:0,36,169	0/1:12,2:14:28.49:28,0,83	0/0:17,0:17:51.15:0,51,619	0/1:11,11:21:34.37:168,0,34	0/1:10,10:19:21.99:177,0,22	0/1:4,2:6:0.32:0,0,32
chr10	89908879	.	TTG	T	1383.13	PASS	AB=1.000;AC=29;AF=0.558;AN=52;BaseQRankSum=4.322;DP=359;FS=13.470;HRun=0;HaplotypeScore=146.4303;InbreedingCoeff=0.5831;MQ=48.55;MQ0=8;MQRankSum=-3.238;QD=8.23;ReadPosRankSum=2.769;VQSLOD=2.6535;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:17.73:0,18,283	1/1:2,9:10:24:262,24,0	0/0:31,1:15:27.03:0,27,353	0/0:38,0:13:9.15:0,9,134	1/1:17,0:17:9.74:46,10,0	1/1:9,0:9:6.21:47,6,0	0/0:10,0:8:6.66:0,7,21	./.	1/1:9,0:9:9.06:35,9,0	0/0:18,0:18:48.15:0,48,703	0/0:23,1:25:6.51:0,7,706	1/1:4,0:4:5.64:27,6,0	1/1:8,0:8:9.12:63,9,0	./.	1/1:5,9:13:33.02:361,33,0	0/0:15,0:15:33.11:0,33,514	1/1:3,18:21:45.10:537,45,0	1/1:5,0:5:0.53:10,1,0	0/1:12,0:12:0.76:9,0,1	0/1:13,0:12:1.62:2,0,20	0/0:1,0:1:2.04:0,2,6	1/1:5,0:5:1.27:5,1,0	1/1:10,0:10:11.02:54,11,0	0/0:5,0:5:1.21:0,1,3	0/0:14,0:14:33.09:0,33,477	1/1:10,0:9:4.12:35,4,0	0/1:10,0:9:6.47:23,0,6	1/1:10,0:10:1.54:39,2,0
chr10	89908884	.	T	TG	1711.62	PASS	AB=0.841;AC=34;AF=0.607;AN=56;BaseQRankSum=8.563;DP=365;FS=13.633;HRun=1;HaplotypeScore=156.3426;InbreedingCoeff=0.7145;MQ=44.45;MQ0=14;MQRankSum=-5.244;QD=12.97;ReadPosRankSum=2.024;VQSLOD=1.5467;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:27.09:0,27,347	0/0:12,0:11:31.83:0,32,250	0/0:46,0:17:42.13:0,42,528	0/0:46,0:12:26.41:0,26,268	0/1:13,0:15:3.24:23,0,3	1/1:6,1:7:13.62:112,14,0	1/1:3,6:7:18.06:230,18,0	1/1:10,0:10:27.04:311,27,0	1/1:5,0:7:9.11:39,9,0	0/0:19,0:19:57.19:0,57,746	0/0:23,0:23:56.57:0,57,707	1/1:3,0:4:3.33:14,3,0	1/1:8,0:8:2.93:22,3,0	1/1:1,0:1:2.99:24,3,0	0/0:15,0:14:37.41:0,37,263	0/0:16,0:16:39.11:0,39,491	0/0:21,0:21:51.21:0,51,327	1/1:5,0:5:1.41:10,1,0	1/1:8,1:9:11.75:108,12,0	1/1:7,4:10:26.97:299,27,0	1/1:0,1:1:3.01:38,3,0	0/1:3,0:4:3.42:15,0,3	1/1:7,0:8:6.23:47,6,0	1/1:1,0:3:0.64:6,1,0	0/0:15,0:15:33.11:0,33,427	1/1:9,1:9:18.16:191,18,0	1/1:7,3:9:18.42:197,18,0	1/1:8,2:10:21.90:225,22,0
chr10	89908885	.	GTGTGTGTGTGTATGTGT	G	8340.64	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=10.258;DP=330;FS=7.130;HRun=0;HaplotypeScore=189.5416;InbreedingCoeff=0.8429;MQ=45.60;MQ0=13;MQRankSum=-5.346;QD=92.67;ReadPosRankSum=4.660;VQSLOD=4.0148;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:27.09:0,27,1581	0/0:12,0:11:33.11:0,33,1876	0/0:51,0:19:54.10:0,54,2915	0/0:48,0:13:30.57:0,31,996	1/1:2,8:10:22.84:936,23,0	1/1:2,0:6:15.05:635,15,0	1/1:6,0:4:9.03:244,9,0	1/1:1,0:1:2.97:20,3,0	1/1:3,2:5:12.04:503,12,0	0/0:19,0:19:57.20:0,57,3759	0/0:23,0:23:60.21:0,60,3455	1/1:2,1:3:6.02:271,6,0	1/1:0,7:7:21.07:972,21,0	1/1:1,0:1:2.99:24,3,0	0/0:15,0:14:42.14:0,42,2440	0/0:16,0:16:39.12:0,39,2532	0/0:21,0:21:54.18:0,54,3023	1/1:1,2:3:6.91:268,7,0	1/1:5,0:6:9.93:252,10,0	1/1:5,0:5:15.05:486,15,0	1/1:1,0:1:3.01:103,3,0	1/1:1,2:3:9.03:367,9,0	1/1:3,4:8:22.63:924,23,0	1/1:2,0:2:5.05:115,5,0	0/0:15,0:15:33.11:0,33,2212	1/1:3,0:6:15.52:568,16,0	1/1:5,0:8:24.08:806,24,0	1/1:3,0:7:21.07:845,21,0
chr10	89908887	.	GTGTGTGTGTATGTGTGT	G	8292.13	PASS	AC=34;AF=0.630;AN=54;BaseQRankSum=10.600;DP=331;FS=9.683;HRun=0;HaplotypeScore=195.1308;InbreedingCoeff=0.8610;MQ=42.99;MQ0=14;MQRankSum=-6.426;QD=96.42;ReadPosRankSum=4.744;VQSLOD=3.5939;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:24.08:0,24,1541	0/0:14,0:13:39.13:0,39,2170	0/0:54,0:19:54.16:0,54,3046	0/0:48,0:12:30.57:0,31,988	1/1:10,0:10:22.84:936,23,0	1/1:2,4:6:15.05:632,15,0	1/1:6,0:4:9.03:245,9,0	./.	1/1:5,0:5:12.04:499,12,0	0/0:20,0:20:60.21:0,60,3878	0/0:22,0:22:57.20:0,57,3413	1/1:3,0:3:6.02:269,6,0	1/1:7,0:7:21.07:950,21,0	1/1:1,0:1:3:25,3,0	0/0:15,0:14:42.13:0,42,2411	0/0:15,0:15:36.12:0,36,2507	0/0:21,0:21:54.18:0,54,3000	1/1:2,0:2:6.02:265,6,0	1/1:4,1:5:9.87:253,10,0	1/1:5,1:5:15.05:484,15,0	1/1:1,0:1:3.01:105,3,0	1/1:3,0:3:9.03:367,9,0	1/1:8,0:8:21.96:930,22,0	1/1:2,0:2:5.05:115,5,0	0/0:16,0:16:33.11:0,33,2211	1/1:3,3:6:15.05:567,15,0	1/1:4,4:8:24.08:807,24,0	1/1:3,4:7:21.07:844,21,0
chr10	89908909	.	GTTTT	G	1768.99	PASS	AB=0.801;AC=25;AF=0.481;AN=52;BaseQRankSum=6.785;DP=341;FS=1.091;HRun=4;HaplotypeScore=157.3474;InbreedingCoeff=-0.5323;MQ=37.57;MQ0=22;MQRankSum=-5.205;QD=7.93;ReadPosRankSum=7.391;VQSLOD=-0.5857;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:18.26:18,0,73	0/1:13,0:12:90.60:91,0,123	0/0:61,0:19:29.55:0,30,420	0/0:52,0:8:20.82:0,21,270	0/1:2,8:10:8.01:171,0,8	0/1:1,4:5:4.80:160,0,5	0/1:7,0:5:8.12:8,0,45	./.	0/1:3,2:5:12.05:50,0,12	0/1:20,0:20:27.21:27,0,184	0/1:24,0:24:53.17:53,0,64	0/1:1,1:2:3.43:39,0,3	1/1:0,7:7:13.13:242,13,0	./.	0/1:15,0:14:58.02:193,0,58	0/1:17,0:17:92.56:93,0,117	0/1:18,0:17:59.72:60,0,217	0/1:1,2:3:5.70:45,0,6	0/1:6,1:5:11.01:56,0,11	0/1:4,1:5:30.68:31,0,48	1/1:2,0:2:2.96:20,3,0	0/1:1,2:3:7.71:40,0,8	0/1:2,4:7:4.97:142,0,5	0/0:2,0:2:3.40:0,3,18	0/1:16,0:16:34.17:34,0,59	0/1:1,3:4:7.94:103,0,8	0/1:3,4:7:39.85:106,0,40	0/1:3,4:7:11.38:134,0,11
chr10	89908910	.	TTTTGTTTG	T	5225.72	PASS	AB=1.000;AC=37;AF=0.771;AN=48;BaseQRankSum=0.613;DP=340;FS=3.775;HRun=0;HaplotypeScore=165.9512;InbreedingCoeff=0.7273;MQ=37.52;MQ0=22;MQRankSum=-3.515;QD=30.92;ReadPosRankSum=2.157;VQSLOD=4.7566;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,14:19:21.07:384,21,0	0/0:9,0:12:26.91:0,27,213	0/0:63,0:19:6.01:0,6,151	0/0:53,0:8:9.50:0,10,243	1/1:10,0:10:20.53:260,21,0	1/1:5,0:5:12.04:216,12,0	./.	./.	1/1:5,0:5:6.02:83,6,0	1/1:12,7:19:33.11:788,33,0	1/1:4,20:24:44.92:853,45,0	1/1:2,0:2:3.01:56,3,0	1/1:7,0:7:19.87:313,20,0	./.	0/0:4,0:14:26.93:0,27,217	1/1:8,8:17:15.05:737,15,0	0/0:15,0:18:23.90:0,24,244	1/1:3,0:3:6.02:90,6,0	1/1:7,0:5:5.05:60,5,0	1/1:5,0:5:3.01:54,3,0	./.	1/1:3,0:3:6:71,6,0	1/1:7,0:7:15.02:220,15,0	0/1:2,0:2:0:0,0,0	1/1:3,13:16:24:497,24,0	1/1:4,0:4:9.03:167,9,0	1/1:7,0:7:12.01:157,12,0	1/1:7,0:7:12.04:221,12,0
chr10	89908930	.	GTTTGTTTGTT	G	6832.98	PASS	AB=0.920;AC=39;AF=0.696;AN=56;BaseQRankSum=6.991;DP=376;FS=0.908;HRun=0;HaplotypeScore=183.1305;InbreedingCoeff=0.3687;MQ=38.56;MQ0=25;MQRankSum=-6.535;QD=25.31;ReadPosRankSum=4.243;VQSLOD=4.1706;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:11.63:12,0,288	0/0:14,0:14:42.14:0,42,883	0/0:33,0:13:33.05:0,33,908	0/0:25,0:7:21.07:0,21,558	1/1:10,8:12:36.12:735,36,0	1/1:12,0:16:47.93:569,48,0	1/1:10,0:10:29.78:223,30,0	1/1:5,0:5:15.01:139,15,0	1/1:4,2:5:15.05:282,15,0	0/1:16,0:16:99:133,0,212	0/1:25,0:25:93.52:94,0,497	1/1:3,1:3:9.03:178,9,0	1/1:10,7:14:42.14:857,42,0	1/1:8,0:8:24.08:361,24,0	0/0:16,0:16:45.15:0,45,889	0/1:19,0:18:99:108,0,226	0/0:16,0:15:41.17:0,41,871	1/1:7,2:7:18.06:349,18,0	1/1:16,0:15:43.97:389,44,0	1/1:10,0:11:32.81:293,33,0	1/1:3,0:3:2.95:22,3,0	1/1:9,2:8:24.08:407,24,0	1/1:8,4:12:36.12:699,36,0	1/1:2,0:2:6.02:90,6,0	0/1:13,0:13:84.17:84,0,107	0/1:5,0:7:20.66:176,0,21	1/1:7,0:11:32.97:401,33,0	0/1:6,0:10:21.76:233,0,22
chr10	89908935	.	TTTGTTTG	T	4309.47	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=7.263;DP=373;FS=4.401;HRun=0;HaplotypeScore=176.7765;InbreedingCoeff=0.3696;MQ=42.39;MQ0=23;MQRankSum=-5.719;QD=15.34;ReadPosRankSum=3.128;VQSLOD=3.7244;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:99:147,0,110	0/0:13,0:13:36.51:0,37,276	0/0:25,0:10:27.07:0,27,587	0/0:21,0:8:23.42:0,23,371	1/1:18,0:12:14.15:137,14,0	1/1:12,4:16:46.30:446,46,0	1/1:14,0:13:34.21:178,34,0	1/1:6,0:6:17.71:114,18,0	1/1:6,0:5:8.04:47,8,0	0/1:16,0:16:24.56:457,0,25	0/1:26,0:26:99:408,0,192	1/1:5,0:4:5.67:40,6,0	1/1:17,0:14:23.99:201,24,0	1/1:8,0:8:8.38:20,8,0	0/0:18,0:18:44.35:0,44,363	0/1:20,0:19:0.80:462,0,1	0/0:15,0:14:35.57:0,36,336	1/1:9,0:7:9.55:67,10,0	1/1:16,1:16:43.26:312,43,0	1/1:10,1:11:31.38:214,31,0	1/1:3,0:3:8.73:52,9,0	1/1:11,0:8:9.56:39,10,0	1/1:12,0:12:19.22:130,19,0	1/1:2,0:2:1.77:4,2,0	0/1:13,0:13:20.97:258,0,21	0/1:11,0:10:99:102,0,119	1/1:9,3:12:34.79:323,35,0	0/1:10,0:10:70.05:150,0,70
chr10	89908936	.	TTGTTTG	T	5490.58	PASS	AB=0.917;AC=40;AF=0.714;AN=56;BaseQRankSum=6.363;DP=369;FS=5.079;HRun=0;HaplotypeScore=165.5045;InbreedingCoeff=0.4389;MQ=42.45;MQ0=23;MQRankSum=-7.139;QD=19.61;ReadPosRankSum=3.191;VQSLOD=4.1913;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:99:111,0,143	0/0:13,0:13:30.99:0,31,238	0/0:23,0:10:27.08:0,27,549	0/0:20,0:8:24.07:0,24,368	1/1:18,0:12:35.81:355,36,0	1/1:16,0:16:47.16:396,47,0	1/1:15,0:14:35.11:211,35,0	1/1:6,0:6:17.82:124,18,0	1/1:6,0:5:14.89:140,15,0	0/1:16,0:16:73.83:394,0,74	0/1:25,0:25:99:343,0,257	1/1:5,0:4:12.02:127,12,0	1/1:17,0:14:39.04:435,39,0	1/1:8,0:8:24.03:232,24,0	0/0:18,0:18:34.40:0,34,271	1/1:19,0:18:3.31:395,3,0	0/0:15,0:14:27.13:0,27,257	1/1:9,0:7:18.01:191,18,0	1/1:17,0:16:45.17:300,45,0	1/1:11,0:11:32.08:212,32,0	1/1:3,0:3:8.84:55,9,0	1/1:11,0:8:23.89:207,24,0	1/1:12,0:12:34.57:352,35,0	1/1:2,0:2:6.01:58,6,0	0/1:13,0:13:38.03:221,0,38	0/1:8,3:10:41.72:153,0,42	1/1:12,0:12:35.26:269,35,0	0/1:6,4:10:4.96:211,0,5
chr10	89908938	.	GTT	G	4570.39	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=6.956;DP=365;FS=4.299;HRun=3;HaplotypeScore=144.9802;InbreedingCoeff=0.3949;MQ=42.74;MQ0=20;MQRankSum=-6.638;QD=17.85;ReadPosRankSum=7.140;VQSLOD=2.1914;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:16.47:0,16,290	0/0:12,0:12:4.07:0,4,204	0/0:21,0:10:27.09:0,27,433	0/0:18,0:8:22.62:0,23,314	1/1:11,8:13:37.34:447,37,0	1/1:16,0:16:47.49:353,47,0	1/1:14,0:13:35.87:286,36,0	1/1:7,0:7:20.99:186,21,0	1/1:3,4:6:14.08:174,14,0	0/1:16,0:16:32.62:33,0,189	0/0:25,0:25:2.10:0,2,489	1/1:1,4:4:12.04:167,12,0	1/1:8,9:14:39.12:510,39,0	1/1:1,7:8:24.08:361,24,0	0/1:17,0:17:10.64:11,0,220	0/1:20,0:19:7.80:8,0,180	0/0:15,0:14:0.54:0,1,154	1/1:3,6:7:18.06:256,18,0	1/1:16,0:16:46.79:349,47,0	1/1:11,0:11:32.67:238,33,0	1/1:3,0:3:2.95:22,3,0	1/1:3,8:8:24.04:324,24,0	1/1:5,7:12:33.56:439,34,0	1/1:0,2:2:6.02:90,6,0	0/1:13,0:13:21.86:22,0,104	0/1:11,0:10:6.09:6,0,75	1/1:10,1:12:35.68:270,36,0	0/1:10,0:10:18.19:18,0,23
chr10	89908941	.	TG	T	3013.21	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=1.301;DP=370;FS=1.046;HRun=1;HaplotypeScore=147.4715;InbreedingCoeff=0.4683;MQ=48.91;MQ0=17;MQRankSum=-4.252;QD=15.45;ReadPosRankSum=3.070;VQSLOD=3.9500;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:30.29:0,30,304	0/1:10,0:10:30.54:31,0,117	0/0:16,0:10:30.06:0,30,351	0/0:18,0:11:25.52:0,26,272	0/0:21,0:14:8.71:0,9,51	1/1:4,12:16:48.15:617,48,0	1/1:0,16:15:36.12:487,36,0	1/1:0,8:8:24.03:295,24,0	0/1:8,0:7:1.45:2,0,1	0/0:17,0:17:14.50:0,14,160	0/0:25,0:25:44.65:0,45,471	0/1:5,0:4:0.62:3,0,1	0/0:17,0:14:2.56:0,3,18	1/1:10,0:10:8.82:25,9,0	0/1:17,0:17:24.69:25,0,175	0/0:20,0:19:25.16:0,25,208	0/1:16,0:15:63.72:64,0,113	0/0:9,0:7:4.64:0,5,13	1/1:2,15:17:50.83:620,51,0	1/1:1,10:11:33.11:437,33,0	1/1:0,3:3:8.94:81,9,0	0/1:11,0:8:0.87:1,0,9	0/1:12,0:12:1.06:1,0,11	1/1:2,0:2:2.13:6,2,0	0/0:13,0:13:8.34:0,8,114	0/1:11,0:10:11.55:12,0,33	1/1:5,7:12:36.11:465,36,0	1/1:10,0:10:6.64:30,7,0
chr10	89909021	.	C	CTT	6379.32	PASS	AB=0.647;AC=35;AF=0.625;AN=56;BaseQRankSum=5.188;DP=404;FS=12.981;HRun=7;HaplotypeScore=92.7741;InbreedingCoeff=0.8451;MQ=48.51;MQ0=16;MQRankSum=-5.423;QD=28.35;ReadPosRankSum=-0.595;VQSLOD=3.1969;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:75.18:0,75,859	0/0:4,0:4:5.68:0,6,28	0/0:27,0:13:27.07:0,27,308	0/0:21,0:9:17.91:0,18,205	1/1:9,13:20:46.23:623,46,0	1/1:6,2:9:23.94:252,24,0	1/1:5,13:17:36.12:559,36,0	1/1:13,8:21:33.96:472,34,0	1/1:2,6:6:18.06:293,18,0	0/0:13,0:13:25.73:0,26,135	0/0:12,0:12:24.63:0,25,111	1/1:3,5:10:21.06:305,21,0	1/1:5,3:5:9.03:147,9,0	1/1:3,6:9:21.07:331,21,0	0/0:23,0:23:53.88:0,54,259	0/0:15,0:15:29.60:0,30,131	0/0:27,0:27:67.87:0,68,324	1/1:3,2:4:0.49:128,0,0	1/1:11,4:16:18.06:266,18,0	1/1:9,11:20:39.13:588,39,0	1/1:4,4:8:15.05:238,15,0	1/1:8,5:11:20.24:255,20,0	1/1:3,6:9:24.07:352,24,0	1/1:1,2:3:6.02:98,6,0	0/0:7,0:7:19.04:0,19,84	0/1:5,6:10:10.70:278,0,11	1/1:4,17:23:54.15:832,54,0	1/1:3,7:11:24.07:363,24,0
chr10	89909028	.	TC	T	3524.29	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=7.955;DP=383;FS=10.052;HRun=3;HaplotypeScore=91.7888;InbreedingCoeff=0.9523;MQ=46.74;MQ0=12;MQRankSum=-4.743;QD=13.99;ReadPosRankSum=0.449;VQSLOD=1.9583;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.25:0,84,1136	1/1:0,7:7:14.92:134,15,0	0/0:26,0:9:24.07:0,24,313	0/0:24,0:10:21.03:0,21,236	1/1:19,3:22:36.70:184,37,0	1/1:6,2:8:14.43:79,14,0	1/1:17,0:16:31.04:152,31,0	1/1:9,4:13:23.94:126,24,0	1/1:8,1:8:14.50:56,14,0	0/0:1,0:13:34.53:0,35,197	0/0:5,0:15:40.45:0,40,241	1/1:8,0:8:14.65:77,15,0	1/1:5,0:5:12.43:65,12,0	1/1:6,1:7:18.20:80,18,0	1/1:0,20:20:57.18:704,57,0	0/0:0,0:15:31.25:0,31,155	1/1:0,26:27:71.44:860,71,0	1/1:3,1:5:12.53:59,13,0	1/1:8,2:9:18.46:86,18,0	1/1:13,5:18:31.82:160,32,0	1/1:7,1:8:12.82:58,13,0	1/1:7,2:8:11.31:62,11,0	1/1:8,1:9:17.61:85,18,0	1/1:5,0:5:11.63:69,12,0	0/0:0,0:8:19.89:0,20,98	1/1:10,2:11:21.26:119,21,0	1/1:23,1:24:49.02:205,49,0	1/1:8,1:9:22.04:105,22,0
chr10	89909472	.	C	CG	1935.96	PASS	AB=0.600;AC=7;AF=0.125;AN=56;BaseQRankSum=-5.582;DP=567;FS=4.146;HRun=3;HaplotypeScore=94.7154;InbreedingCoeff=0.8351;MQ=88.48;MQ0=0;MQRankSum=-1.735;QD=31.23;ReadPosRankSum=0.357;VQSLOD=3.3642;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1319	0/0:8,0:8:24.07:0,24,287	0/0:28,0:28:66.19:0,66,776	0/0:17,0:17:38.45:0,38,467	0/0:22,0:22:50.09:0,50,670	0/0:15,0:15:45.14:0,45,538	0/0:22,0:22:66.20:0,66,791	0/0:24,0:24:69.16:0,69,801	0/0:24,0:24:66.20:0,66,790	1/1:2,26:28:75.24:1024,75,0	1/1:1,11:12:30.10:414,30,0	0/0:16,0:16:45.14:0,45,535	0/0:9,0:9:27.08:0,27,323	0/0:22,0:22:63.19:0,63,754	0/0:20,0:20:57.15:0,57,662	0/1:3,6:9:47.74:228,0,48	0/0:35,0:35:99:0,99,1187	0/0:25,0:25:69.21:0,69,825	0/0:28,0:28:69.19:0,69,805	0/0:12,0:12:27:0,27,301	0/0:26,0:26:72.18:0,72,838	0/0:15,0:15:39.12:0,39,466	0/0:20,0:20:48.14:0,48,568	0/0:27,0:27:72.18:0,72,846	1/1:0,13:13:30.10:419,30,0	0/0:21,0:21:60.18:0,60,719	0/0:22,0:22:60.18:0,60,716	0/0:10,0:10:30.09:0,30,359
chr10	89909733	.	TGTGTGTGTGTGTGTGTGTGTGTGCGCGC	T	1677.50	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=5.240;DP=380;FS=11.226;HRun=0;HaplotypeScore=179.9926;InbreedingCoeff=0.1538;MQ=45.54;MQ0=21;MQRankSum=-2.215;QD=14.34;ReadPosRankSum=-1.337;VQSLOD=1.4664;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:18.52:0,19,504	0/1:10,0:9:43.37:43,0,218	0/0:15,0:3:6.02:0,6,119	0/0:24,0:8:9.40:0,9,146	0/0:9,0:9:9.03:0,9,654	0/0:9,0:8:7.83:0,8,73	0/0:27,0:27:38.35:0,38,2486	0/0:13,0:13:36.12:0,36,1950	1/1:11,0:10:2.99:54,3,0	1/1:3,16:19:0.07:443,0,0	./.	0/0:15,0:15:15.05:0,15,737	0/1:6,0:4:42.82:43,0,537	0/0:12,0:11:6.02:0,6,200	0/0:7,0:6:12.04:0,12,587	1/1:3,6:9:9.03:678,9,0	0/1:14,0:12:36.39:36,0,701	0/0:16,0:16:35.07:0,35,2199	0/1:12,0:10:5.67:6,0,1574	0/1:8,0:8:13.98:14,0,294	0/0:21,0:18:9.49:0,9,414	0/0:5,0:5:6.02:0,6,294	0/0:15,0:15:13.40:0,13,183	0/0:27,0:27:30.57:0,31,2413	1/1:1,9:10:6.02:452,6,0	0/1:13,0:12:19.17:19,0,1818	0/0:11,0:9:18.53:0,19,1115	0/1:5,0:5:41.41:41,0,384
chr10	89909749	.	TGTGTGTGCGCGC	T	1381.10	PASS	AB=0.962;AC=23;AF=0.460;AN=50;BaseQRankSum=6.144;DP=311;FS=24.784;HRun=0;HaplotypeScore=111.9985;InbreedingCoeff=-0.0424;MQ=43.92;MQ0=20;MQRankSum=-2.800;QD=7.16;ReadPosRankSum=2.267;VQSLOD=0.1145;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,20:27:0:0,0,0	0/1:10,0:9:33.93:46,0,34	./.	0/0:6,0:4:3.33:0,3,39	0/0:10,0:9:6.02:0,6,80	1/1:6,0:5:1.25:3,1,0	0/0:25,0:25:22.89:0,23,453	0/1:10,0:10:85.61:86,0,154	1/1:12,0:11:6.02:109,6,0	1/1:17,0:17:11.38:256,11,0	./.	0/1:12,0:12:15.77:16,0,37	0/1:8,0:6:60.24:60,0,138	./.	0/0:6,0:5:3.01:0,3,50	1/1:7,0:7:9.03:281,9,0	1/1:13,0:11:8.38:145,8,0	0/1:16,0:16:6.43:6,0,231	0/1:13,0:11:99:156,0,216	0/1:8,0:8:13.98:14,0,83	0/0:19,0:16:0.46:0,0,1	0/0:3,0:3:3.01:0,3,46	0/0:11,0:11:2.90:0,3,28	0/0:23,0:23:21.54:0,22,641	1/1:9,0:9:6.02:187,6,0	0/1:10,0:9:84.58:85,0,289	0/1:11,0:9:29.96:30,0,122	0/1:3,0:3:43.29:47,0,43
chr10	89909755	.	TGCGCGCGC	T	1375.99	PASS	AB=1.000;AC=33;AF=0.717;AN=46;BaseQRankSum=2.974;DP=301;FS=5.763;HRun=0;HaplotypeScore=96.7961;InbreedingCoeff=0.3266;MQ=51.19;MQ0=16;MQRankSum=-2.356;QD=6.78;ReadPosRankSum=2.028;VQSLOD=1.2437;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:26:0:0,0,0	1/1:2,8:9:2.65:70,3,0	0/0:2,0:1:2.22:0,2,7	0/1:10,0:7:8.63:9,0,54	./.	1/1:6,0:5:0.47:1,0,0	0/0:24,0:24:7.27:0,7,73	0/1:12,0:12:12.89:75,0,13	1/1:10,0:9:6.02:84,6,0	1/1:17,0:17:11.62:171,12,0	./.	1/1:13,0:13:5.61:138,6,0	1/1:8,0:6:5.85:49,6,0	./.	./.	1/1:6,0:7:9.03:159,9,0	1/1:6,7:11:8.92:161,9,0	1/1:16,0:15:2.54:54,3,0	1/1:11,0:9:4.21:211,4,0	1/1:8,0:8:2.04:6,2,0	0/0:14,0:12:0.33:0,0,1	./.	0/0:11,0:11:2.80:0,3,43	0/0:22,0:22:12.04:0,12,212	1/1:9,0:9:6.02:104,6,0	1/1:10,0:9:9.02:113,9,0	1/1:12,0:10:6.01:59,6,0	1/1:4,0:4:2.09:39,2,0
chr10	89909765	.	CGCGCGCGCGT	C	1755.14	PASS	AB=1.000;AC=33;AF=0.688;AN=48;BaseQRankSum=1.689;DP=276;FS=10.778;HRun=0;HaplotypeScore=89.8026;InbreedingCoeff=0.3149;MQ=61.97;MQ0=10;MQRankSum=-3.144;QD=9.14;ReadPosRankSum=4.426;VQSLOD=0.7340;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:0:0,0,0	1/1:9,0:9:2.95:38,3,0	0/0:4,0:3:2.22:0,2,7	0/0:13,0:10:3.58:0,4,101	./.	1/1:5,0:4:0.89:2,1,0	0/1:18,0:18:3.41:3,0,51	1/1:2,5:7:14.55:252,15,0	1/1:9,0:8:6.02:131,6,0	0/1:17,0:17:35.30:35,0,68	./.	1/1:14,0:14:6.02:117,6,0	1/1:7,0:6:9.03:143,9,0	./.	./.	1/1:6,0:6:9.03:108,9,0	0/1:13,0:12:28.27:68,0,28	1/1:4,9:13:5.70:115,6,0	1/1:10,0:9:15.33:358,15,0	1/1:5,0:5:3.01:30,3,0	0/0:13,0:11:0.46:0,0,1	0/1:2,0:2:0:0,0,0	0/0:13,0:13:2.90:0,3,76	0/0:10,7:17:12.04:0,12,245	1/1:11,0:11:6.02:70,6,0	1/1:6,0:5:12.02:204,12,0	1/1:6,0:5:6.02:103,6,0	1/1:3,0:3:4.53:107,5,0
chr10	89909769	.	CGCGCGT	C	1716.22	PASS	AB=0.856;AC=33;AF=0.688;AN=48;BaseQRankSum=1.348;DP=254;FS=19.509;HRun=0;HaplotypeScore=77.7189;InbreedingCoeff=0.3164;MQ=67.62;MQ0=6;MQRankSum=-2.906;QD=9.92;ReadPosRankSum=4.363;VQSLOD=0.2021;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:0:0,0,0	1/1:9,0:9:2.81:35,3,0	0/0:5,0:4:1.72:0,2,4	0/0:14,0:11:7.45:0,7,114	./.	1/1:3,2:4:0.89:2,1,0	0/1:6,10:16:0.09:9,0,0	1/1:5,0:5:14.81:187,15,0	1/1:2,7:8:6.02:119,6,0	0/1:17,0:17:40:107,0,40	./.	1/1:0,12:12:6.02:127,6,0	1/1:2,5:6:8.82:109,9,0	./.	./.	1/1:7,0:7:9.03:102,9,0	0/1:10,0:10:27.96:60,0,28	1/1:10,0:9:5.91:67,6,0	1/1:4,5:8:18.02:358,18,0	1/1:1,4:5:3.01:31,3,0	0/0:12,0:11:0.46:0,0,1	0/1:1,1:2:0:0,0,0	0/0:6,7:13:2.84:0,3,47	0/0:15,1:16:3.01:0,3,39	1/1:11,0:11:6.02:67,6,0	1/1:0,5:5:11.71:213,12,0	1/1:2,2:3:6.02:112,6,0	1/1:1,2:3:8.92:135,9,0
chr10	89911324	.	G	GTCTC	6491.25	PASS	AB=0.912;AC=46;AF=0.885;AN=52;BaseQRankSum=-0.799;DP=636;FS=1.843;HRun=0;HaplotypeScore=167.1356;InbreedingCoeff=0.1103;MQ=63.64;MQ0=3;MQRankSum=0.656;QD=11.04;ReadPosRankSum=0.000;VQSLOD=4.4949;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,1:26:54.27:94,0,54	1/1:8,2:11:6.02:141,6,0	0/1:32,0:25:0:0,0,0	./.	1/1:23,0:23:24.08:463,24,0	1/1:24,0:21:14.64:258,15,0	1/1:18,0:17:3.01:52,3,0	0/1:33,0:30:29.62:142,0,30	1/1:24,1:25:30.10:604,30,0	1/1:24,0:22:25.72:381,26,0	1/1:27,0:27:5.90:125,6,0	1/1:19,0:19:24.08:477,24,0	1/1:19,1:21:35.85:667,36,0	1/1:23,0:23:24.06:424,24,0	1/1:16,11:27:14.20:289,14,0	1/1:22,1:24:5.91:104,6,0	0/1:11,7:23:23.18:289,0,23	1/1:12,0:12:15.05:286,15,0	1/1:25,0:22:12.04:211,12,0	0/1:25,0:25:0.21:0,0,0	./.	1/1:17,0:17:8.73:180,9,0	1/1:11,0:11:14.94:292,15,0	1/1:25,0:25:12.04:217,12,0	1/1:26,0:25:0.47:1,0,0	1/1:22,0:21:21.07:407,21,0	1/1:28,0:27:20.06:269,20,0	0/1:14,0:14:0.53:118,0,1
chr10	89911330	.	C	CTCTT	7889.43	PASS	AB=0.943;AC=34;AF=0.607;AN=56;BaseQRankSum=-3.868;DP=655;FS=14.959;HRun=0;HaplotypeScore=121.1791;InbreedingCoeff=-0.0215;MQ=59.78;MQ0=6;MQRankSum=0.230;QD=14.27;ReadPosRankSum=4.930;VQSLOD=3.6164;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:4.96:5,0,292	0/1:14,0:13:27.62:28,0,101	0/0:26,0:18:41.58:0,42,373	0/0:27,0:10:18.93:0,19,148	1/1:1,23:24:59.71:877,60,0	0/1:13,11:21:17.95:74,0,18	0/1:20,0:19:3.84:206,0,4	0/1:31,0:28:61.91:465,0,62	1/1:4,25:31:30.10:775,30,0	0/0:22,0:20:5.20:0,5,264	0/1:28,0:28:50.59:51,0,252	1/1:1,19:22:24.08:636,24,0	1/1:4,19:24:35.75:857,36,0	1/1:7,18:26:24.01:619,24,0	0/1:28,0:27:99:156,0,142	0/1:25,0:24:13.20:13,0,126	0/1:22,0:22:99:139,0,186	1/1:2,12:16:14.20:400,14,0	0/1:23,0:19:49.39:180,0,49	1/1:26,0:26:19.61:316,20,0	1/1:22,0:22:7.83:309,8,0	1/1:5,14:20:29.55:381,30,0	0/1:1,12:13:2.92:382,0,3	1/1:2,18:23:12.04:323,12,0	0/0:27,0:26:26.42:0,26,211	0/1:25,0:24:99:272,0,109	0/1:29,0:28:57.77:283,0,58	0/1:12,0:12:24.21:144,0,24
chr10	89911559	.	CA	C	2038.54	PASS	AB=0.683;AC=39;AF=0.696;AN=56;BaseQRankSum=0.103;DP=519;FS=8.053;HRun=16;HaplotypeScore=68.9544;InbreedingCoeff=-0.1746;MQ=74.49;MQ0=3;MQRankSum=0.069;QD=4.50;ReadPosRankSum=6.382;VQSLOD=1.0117;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:39:44.64:129,45,0	1/1:0,0:5:8.15:24,8,0	0/0:34,0:15:3.23:0,3,54	0/0:32,0:18:25.65:0,26,146	0/1:12,8:20:22.14:82,0,22	0/1:8,12:20:42.92:65,0,43	1/1:6,13:19:1:112,1,0	0/1:15,9:24:33.79:100,0,34	1/1:7,8:15:11.53:68,12,0	0/1:9,9:18:4.80:87,0,5	1/1:12,9:22:3.08:79,3,0	0/1:16,1:16:31.26:40,0,31	0/1:9,8:17:22.32:66,0,22	0/1:8,4:12:21.99:22,0,43	1/1:2,0:22:32.56:94,33,0	0/1:6,8:14:32.68:54,0,33	1/1:8,0:24:26.42:77,26,0	0/1:7,4:11:9.12:57,0,9	0/1:6,8:14:30.13:82,0,30	1/1:4,16:20:12.85:189,13,0	1/1:7,6:16:23.51:125,24,0	1/1:7,3:11:2.21:63,2,0	1/1:4,4:9:7.74:42,8,0	0/1:5,12:20:3.31:107,0,3	0/1:4,8:15:9.71:92,0,10	0/1:12,13:28:24.13:161,0,24	1/1:3,9:13:13.87:87,14,0	1/1:1,4:6:16.75:95,17,0
chr10	89911828	.	CT	C	1839.09	PASS	AB=0.749;AC=42;AF=0.750;AN=56;BaseQRankSum=4.685;DP=475;FS=9.265;HRun=16;HaplotypeScore=63.9426;InbreedingCoeff=0.3551;MQ=61.87;MQ0=22;MQRankSum=0.646;QD=4.38;ReadPosRankSum=1.912;VQSLOD=0.8170;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,15:26:11.57:128,12,0	1/1:3,0:5:3.98:12,4,0	0/1:14,0:11:4.52:5,0,17	0/0:7,0:4:6.99:0,7,35	1/1:7,1:14:17.08:57,17,0	1/1:5,14:18:32.33:197,32,0	0/1:7,7:13:30.85:43,0,31	1/1:8,8:20:28.57:146,29,0	1/1:3,0:9:10.01:29,10,0	0/0:19,1:23:13.79:0,14,223	0/1:17,4:21:18.10:18,0,179	1/1:5,0:18:24.36:70,24,0	1/1:5,0:12:8.06:23,8,0	1/1:8,0:19:16.18:47,16,0	1/1:5,3:16:18.94:83,19,0	0/0:11,1:13:5:0,5,159	1/1:4,0:22:34.25:100,34,0	1/1:7,0:22:28.48:82,28,0	0/1:15,10:23:35.08:130,0,35	1/1:9,8:19:22.25:132,22,0	0/1:6,3:10:15.86:16,0,17	1/1:9,0:14:13.01:47,13,0	1/1:5,0:8:10.16:29,10,0	1/1:6,1:14:8.99:35,9,0	0/0:12,0:12:26.76:0,27,207	1/1:8,10:20:8.68:146,9,0	1/1:7,19:23:27.71:278,28,0	0/1:5,11:17:10.32:156,0,10
chr10	89912263	.	C	CTTGT	2001.74	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.667;DP=630;FS=8.776;HRun=0;HaplotypeScore=111.3390;InbreedingCoeff=0.9562;MQ=67.22;MQ0=4;MQRankSum=1.166;QD=34.51;ReadPosRankSum=2.349;VQSLOD=3.4551;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:75.24:0,75,1201	1/1:3,5:9:5.93:90,6,0	0/0:23,0:16:23.73:0,24,299	0/0:31,0:30:26.55:0,27,348	0/0:22,0:22:32.99:0,33,454	0/0:21,0:21:48.16:0,48,780	0/0:24,0:24:56.98:0,57,884	0/0:38,0:38:60.12:0,60,927	0/0:20,0:20:54.15:0,54,829	0/0:28,0:28:59.48:0,59,981	0/0:12,0:12:33.09:0,33,493	0/0:20,0:20:42.14:0,42,678	0/0:21,0:21:48.13:0,48,736	0/0:22,0:22:60.18:0,60,931	1/1:1,14:12:30.10:731,30,0	0/0:13,0:13:27.05:0,27,370	1/1:7,25:34:54.19:1315,54,0	0/0:21,0:21:48.16:0,48,782	0/0:29,0:28:47.83:0,48,785	0/0:29,0:29:51.15:0,51,770	0/0:34,0:34:81.27:0,81,1318	0/0:14,0:14:30.10:0,30,487	0/0:13,0:13:27.09:0,27,439	0/0:35,0:35:87.21:0,87,1317	0/0:11,0:11:21.05:0,21,310	0/0:19,0:19:42.13:0,42,665	0/0:24,0:24:42.13:0,42,653	0/0:11,0:11:24.08:0,24,393
chr10	89912418	.	T	TCC	1745.86	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-6.319;DP=487;FS=1.283;HRun=7;HaplotypeScore=77.0030;InbreedingCoeff=0.8597;MQ=67.93;MQ0=1;MQRankSum=1.806;QD=24.25;ReadPosRankSum=0.974;VQSLOD=2.7000;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,111,1270	1/1:1,8:9:18.06:295,18,0	0/0:18,0:14:16.17:0,16,294	0/1:18,0:12:4.29:4,0,167	0/0:14,0:14:39.11:0,39,454	0/0:22,0:22:51.14:0,51,584	0/0:14,0:14:36.08:0,36,406	0/0:31,0:31:69.18:0,69,804	0/0:19,0:19:48.13:0,48,559	0/0:20,0:20:51.12:0,51,579	0/0:12,0:12:24.07:0,24,280	0/0:13,0:13:36.11:0,36,419	0/0:17,0:17:42.12:0,42,489	0/0:12,0:12:24.05:0,24,269	1/1:1,18:19:39.13:626,39,0	0/0:11,0:11:30.06:0,30,329	1/1:1,24:26:60.20:964,60,0	0/0:12,0:12:33.05:0,33,367	0/0:20,0:20:54.09:0,54,588	0/0:19,0:19:57.16:0,57,653	0/0:19,0:19:54.16:0,54,628	0/0:17,0:17:42.12:0,42,489	0/0:12,0:12:27.06:0,27,304	0/0:16,0:16:42.12:0,42,489	0/0:16,0:16:42.10:0,42,480	0/0:14,0:14:33.03:0,33,361	0/0:22,0:22:66.18:0,66,757	0/0:4,0:4:12.04:0,12,140
chr10	89912643	.	ATTTATTTATTCCC	A	24155.09	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=15.493;DP=449;FS=2.403;HRun=0;HaplotypeScore=195.4212;InbreedingCoeff=0.9528;MQ=56.33;MQ0=0;MQRankSum=-14.980;QD=87.84;ReadPosRankSum=3.946;VQSLOD=4.9945;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.19:0,54,3236	0/0:7,0:7:21.07:0,21,1368	0/0:12,0:10:27.09:0,27,1097	0/0:16,0:15:34.34:0,34,1657	1/1:3,25:28:66.23:2520,66,0	1/1:1,17:18:45.15:1783,45,0	1/1:5,8:13:21.07:832,21,0	1/1:2,10:12:27.04:666,27,0	1/1:1,15:16:39.13:1545,39,0	0/0:18,0:18:48.16:0,48,3075	0/0:14,0:14:39.13:0,39,2297	1/1:1,19:20:51.18:2020,51,0	1/1:2,15:17:33.11:1307,33,0	1/1:3,15:18:45.15:1782,45,0	0/0:22,0:22:60.21:0,60,3841	0/0:22,0:22:66.23:0,66,4116	0/0:23,0:23:60.21:0,60,3424	1/1:1,1:2:3.01:119,3,0	1/1:5,11:15:30.99:1046,31,0	1/1:3,16:19:45.15:1783,45,0	1/1:0,3:3:6.02:195,6,0	1/1:5,14:19:42.14:1664,42,0	1/1:1,17:18:42.14:1664,42,0	1/1:2,13:15:33.11:1307,33,0	0/0:20,0:20:51.16:0,51,2971	1/1:1,10:11:30.10:1189,30,0	1/1:1,20:21:57.20:2258,57,0	1/1:2,7:9:12.04:475,12,0
chr10	89913058	.	CA	C	1130.75	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=8.386;DP=404;FS=1.226;HRun=9;HaplotypeScore=38.2476;InbreedingCoeff=0.9068;MQ=69.29;MQ0=0;MQRankSum=-0.283;QD=20.19;ReadPosRankSum=1.829;VQSLOD=3.5706;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.20:0,66,762	0/0:9,0:9:27.08:0,27,312	./.	0/0:12,0:8:7.17:0,7,88	0/0:23,0:24:66.01:0,66,729	0/0:23,0:23:63.19:0,63,727	0/0:12,0:12:30.09:0,30,346	0/0:28,0:28:75.21:0,75,858	0/0:13,0:13:36.11:0,36,415	1/1:3,20:23:60.02:545,60,0	1/1:1,13:14:33.01:302,33,0	0/0:14,0:14:39.10:0,39,440	0/0:11,0:11:24.07:0,24,277	0/0:11,0:11:33.10:0,33,381	0/0:13,0:13:11.73:0,12,388	1/1:0,5:5:12.01:110,12,0	0/0:29,0:29:78.15:0,78,882	0/0:12,0:12:33.10:0,33,381	0/0:24,0:24:54.16:0,54,623	0/0:20,0:20:60.18:0,60,692	0/0:4,0:4:12.04:0,12,138	0/0:3,0:3:9.03:0,9,104	0/0:8,0:8:24.07:0,24,277	0/0:2,0:2:6.02:0,6,69	1/1:2,12:14:36.02:330,36,0	0/0:23,0:23:66.19:0,66,759	0/0:12,0:12:33.10:0,33,381	0/0:8,0:8:24.04:0,24,262
chr10	89913511	.	A	ATT	2147.57	PASS	AB=0.749;AC=26;AF=0.464;AN=56;BaseQRankSum=-8.808;DP=499;FS=0.429;HRun=13;HaplotypeScore=91.0047;InbreedingCoeff=0.8342;MQ=83.20;MQ0=4;MQRankSum=0.827;QD=8.59;ReadPosRankSum=-2.946;VQSLOD=1.0223;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:43:86.14:0,86,821	0/0:2,0:6:10.96:0,11,47	0/0:44,0:22:17.62:0,18,148	0/1:34,1:22:19.05:19,0,59	0/0:4,0:18:35.73:0,36,156	1/1:1,0:15:29.94:104,30,0	1/1:6,1:17:25.98:138,26,0	1/1:9,2:31:34.22:209,34,0	0/0:1,0:9:19.21:0,19,82	1/1:5,9:14:27.01:310,27,0	1/1:1,8:12:29.52:329,30,0	0/0:4,0:12:19.63:0,20,83	0/0:2,0:10:13.56:0,14,59	0/0:0,0:11:24.70:0,25,106	0/0:2,0:8:16.46:0,16,71	1/1:4,9:14:16.62:318,17,0	0/0:6,0:38:68.57:0,69,295	0/0:5,0:19:32.90:0,33,141	1/1:6,1:21:15.10:162,15,0	1/1:7,1:16:17.98:93,18,0	1/1:8,1:18:25.46:107,25,0	0/0:2,0:7:10.92:0,11,47	0/0:5,0:12:19.15:0,19,82	0/0:3,0:12:24.66:0,25,106	1/1:4,7:13:23.56:291,24,0	1/1:7,1:25:45.43:188,45,0	0/1:2,1:8:10.44:59,0,10	1/1:1,0:7:12.48:43,12,0
chr10	89914580	.	T	TCC	2122.98	PASS	AB=0.625;AC=35;AF=0.729;AN=48;BaseQRankSum=-3.785;DP=201;FS=28.692;HRun=0;HaplotypeScore=296.2852;InbreedingCoeff=0.4322;MQ=28.20;MQ0=0;MQRankSum=-1.206;QD=11.41;ReadPosRankSum=0.651;VQSLOD=2.1439;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,2:9:1.54:53,2,0	1/1:7,3:10:16.56:130,17,0	./.	./.	0/0:0,4:4:4.78:0,5,18	0/1:6,9:14:1.16:129,0,1	1/1:10,0:10:26.13:221,26,0	1/1:6,0:3:3.01:51,3,0	1/1:0,4:4:2.66:14,3,0	1/1:13,3:16:20.64:269,21,0	1/1:15,5:20:10.91:84,11,0	0/0:0,3:3:3.37:0,3,9	0/0:0,2:2:1.12:0,1,3	./.	1/1:6,6:12:13.35:110,13,0	1/1:3,0:3:8.91:61,9,0	1/1:3,3:6:8.68:54,9,0	./.	1/1:4,3:7:1.75:83,2,0	1/1:11,2:13:11.85:64,12,0	0/0:1,1:2:2.60:0,3,10	1/1:0,1:1:1.55:4,2,0	0/0:0,1:1:1.25:0,1,3	0/0:0,1:1:0.47:0,0,1	1/1:17,1:18:33.75:288,34,0	1/1:18,1:19:45.80:399,46,0	1/1:9,3:12:24.28:185,24,0	1/1:3,2:5:2:35,2,0
chr10	89914788	.	G	GCA	753.66	PASS	AB=0.863;AC=16;AF=0.348;AN=46;BaseQRankSum=-4.312;DP=492;FS=3.708;HRun=0;HaplotypeScore=75.3839;InbreedingCoeff=-0.0583;MQ=66.24;MQ0=9;MQRankSum=2.808;QD=3.15;ReadPosRankSum=0.602;VQSLOD=1.7064;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:30:33.41:33,0,55	0/0:2,0:3:2.84:0,3,14	./.	./.	1/1:9,5:14:3.01:44,3,0	0/0:11,0:21:18.60:0,19,88	0/0:13,0:15:4.88:0,5,20	./.	0/1:5,4:11:22.49:55,0,22	0/0:9,0:12:5.68:0,6,28	0/0:12,0:12:2.37:0,2,8	0/1:10,3:14:25.79:38,0,26	1/1:3,3:6:6.02:88,6,0	0/0:14,0:14:5.21:0,5,62	0/0:12,0:17:5.21:0,5,22	./.	0/0:18,0:22:2.84:0,3,14	0/1:17,6:23:6.52:153,0,7	0/1:13,0:13:19.13:19,0,25	0/0:14,0:14:6.01:0,6,64	0/1:43,0:43:27.84:28,0,93	1/1:11,0:11:3:25,3,0	1/1:8,0:8:6.01:66,6,0	0/1:24,17:44:55.71:315,0,56	0/0:13,0:16:2.84:0,3,14	0/0:14,0:15:2.43:0,2,14	0/1:16,0:16:25.62:26,0,129	./.
chr10	89916002	.	G	GT	4986.60	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=8.274;DP=649;FS=2.683;HRun=7;HaplotypeScore=98.9497;InbreedingCoeff=0.9990;MQ=66.04;MQ0=2;MQRankSum=-1.525;QD=15.88;ReadPosRankSum=5.797;VQSLOD=4.5622;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,36:40:90.17:1065,90,0	1/1:0,8:8:24.07:289,24,0	0/0:27,0:21:30.52:0,31,423	0/0:31,0:25:45.69:0,46,463	1/1:27,0:27:52.61:251,53,0	0/0:20,0:20:57.09:0,57,550	0/0:25,0:25:69.11:0,69,666	0/0:20,0:20:42.05:0,42,406	1/1:20,0:20:52.46:241,52,0	0/0:26,0:26:75.12:0,75,724	0/0:29,0:29:78.12:0,78,753	1/1:21,0:21:38.71:187,39,0	1/1:17,0:17:41.17:184,41,0	1/1:17,0:17:33.09:151,33,0	1/1:5,19:24:51.16:616,51,0	0/0:18,0:18:48.08:0,48,464	1/1:5,33:38:92.10:1106,92,0	1/1:20,0:21:29.67:142,30,0	0/0:18,0:18:51.08:0,51,493	0/0:25,0:25:72.12:0,72,695	0/0:21,0:21:57.07:0,57,544	1/1:28,0:28:50.89:238,51,0	1/1:22,0:22:50.05:235,50,0	1/1:29,0:29:63.13:282,63,0	0/0:18,0:18:51.08:0,51,492	0/0:27,0:27:60.07:0,60,574	0/0:21,0:21:60.09:0,60,579	0/0:9,0:9:21.03:0,21,203
chr10	89916004	.	T	TTTG	10344.90	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-12.005;DP=652;FS=5.761;HRun=0;HaplotypeScore=103.5628;InbreedingCoeff=0.9841;MQ=65.86;MQ0=2;MQRankSum=-1.837;QD=49.03;ReadPosRankSum=4.486;VQSLOD=6.9639;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:51.17:0,51,293	0/0:8,0:8:20.77:0,21,78	0/0:26,0:19:27.87:0,28,791	0/0:31,0:25:6.57:0,7,735	1/1:0,28:28:66.22:1363,66,0	0/0:20,0:20:60.19:0,60,993	0/0:24,0:24:69.24:0,69,1153	0/0:17,0:17:41.46:0,41,710	1/1:1,19:19:57.20:1228,57,0	0/0:27,0:27:78.26:0,78,1293	0/0:30,0:30:84.24:0,84,1365	1/1:0,21:21:48.16:1021,48,0	1/1:3,16:18:45.15:980,45,0	1/1:1,17:20:36.12:780,36,0	0/0:23,0:23:56.11:0,56,264	0/0:18,0:18:48.16:0,48,814	0/0:38,0:38:86.89:0,87,367	1/1:3,20:23:39.12:832,39,0	0/0:18,0:18:51.17:0,51,859	0/0:27,0:27:81.24:0,81,1289	0/0:20,0:20:60.20:0,60,991	1/1:0,25:26:72.24:1439,72,0	1/1:0,21:22:54.13:1129,54,0	1/1:1,30:32:72.25:1573,72,0	0/0:18,0:18:54.18:0,54,897	0/0:27,0:27:75.22:0,75,1157	0/0:21,0:21:63.21:0,63,1044	0/0:9,0:9:24.04:0,24,378
chr10	89916279	.	TC	T	4731.41	PASS	AB=0.928;AC=28;AF=0.500;AN=56;BaseQRankSum=5.639;DP=493;FS=2.395;HRun=10;HaplotypeScore=58.1322;InbreedingCoeff=0.8355;MQ=80.75;MQ0=0;MQRankSum=-0.167;QD=16.96;ReadPosRankSum=3.822;VQSLOD=5.4566;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:16:17.37:0,17,115	0/0:2,0:6:8.52:0,9,43	0/0:15,0:15:31.20:0,31,277	0/0:16,0:15:7.86:0,8,69	1/1:3,26:29:59.97:521,60,0	0/1:15,2:17:9.92:10,0,347	0/0:21,0:21:45.12:0,45,498	0/0:23,0:23:36.95:0,37,378	1/1:0,11:11:26.99:234,27,0	1/1:2,14:16:38.96:334,39,0	1/1:3,14:17:44.02:370,44,0	1/1:2,20:22:59.98:521,60,0	1/1:1,3:4:6:52,6,0	1/1:4,13:17:26.99:234,27,0	0/0:4,0:19:20.04:0,20,119	1/1:2,14:16:41.99:364,42,0	0/0:3,0:14:20.20:0,20,122	1/1:1,18:19:50.99:443,51,0	0/1:24,1:25:6.78:7,0,356	0/0:12,0:12:24.06:0,24,265	0/0:13,0:12:21.04:0,21,222	1/1:6,21:26:50.97:443,51,0	1/1:3,22:25:62.98:547,63,0	1/1:5,10:15:26.98:234,27,0	1/1:1,18:19:47.99:417,48,0	0/0:17,0:17:33.09:0,33,365	0/0:24,0:24:51.03:0,51,524	0/0:16,1:17:13.04:0,13,364
chr10	89916471	.	C	CGTTTT	2227.91	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-4.842;DP=548;FS=0.727;HRun=0;HaplotypeScore=104.9473;InbreedingCoeff=0.9760;MQ=79.26;MQ0=0;MQRankSum=-2.536;QD=46.41;ReadPosRankSum=0.553;VQSLOD=3.5619;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:69.24:0,69,1314	1/1:3,3:7:9.03:263,9,0	0/0:23,0:24:28.32:0,28,523	0/0:17,0:18:23.78:0,24,369	0/0:28,0:28:72.20:0,72,1337	0/0:17,0:17:45.15:0,45,864	0/0:18,0:18:42.14:0,42,806	0/0:38,0:38:81.25:0,81,1465	0/0:12,0:12:30.10:0,30,576	0/0:20,0:20:48.15:0,48,845	0/0:13,0:13:27.09:0,27,518	0/0:13,0:13:30.09:0,30,546	0/0:13,0:13:27.09:0,27,518	0/0:20,0:20:42.14:0,42,807	1/1:10,12:22:33.11:964,33,0	0/0:16,0:16:39.13:0,39,749	1/1:4,15:19:39.13:1139,39,0	0/0:14,0:14:36.12:0,36,692	0/0:20,0:20:45.15:0,45,864	0/0:19,0:19:51.17:0,51,967	0/0:34,0:34:87.26:0,87,1603	0/0:11,0:11:27.09:0,27,519	0/0:15,0:15:33.07:0,33,596	0/0:18,0:18:48.16:0,48,922	0/0:18,0:18:33.11:0,33,634	0/0:27,0:27:63.22:0,63,1210	0/0:21,0:21:51.16:0,51,948	0/0:20,0:20:47.85:0,48,921
chr10	89916824	.	TA	T	516.25	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.006;DP=500;FS=0.000;HRun=10;HaplotypeScore=65.7602;InbreedingCoeff=0.9264;MQ=84.68;MQ0=1;MQRankSum=-0.614;QD=15.18;ReadPosRankSum=-0.279;VQSLOD=3.6795;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:63.13:0,63,676	1/1:0,3:3:6:52,6,0	0/0:39,0:28:9.96:0,10,295	0/0:36,1:28:30.26:0,30,288	0/0:24,0:26:59.93:0,60,610	0/0:14,0:14:36.10:0,36,398	0/0:21,0:21:51.13:0,51,556	0/0:28,0:28:65.91:0,66,709	0/0:18,0:18:45.12:0,45,498	0/0:19,0:19:54.14:0,54,591	0/0:16,0:16:45.08:0,45,472	0/0:9,0:9:21.01:0,21,211	0/0:6,0:6:15.03:0,15,157	0/0:6,0:6:15:0,15,153	1/1:0,14:14:26.99:234,27,0	0/0:15,0:15:35.98:0,36,368	1/1:2,15:17:41.99:364,42,0	0/0:21,0:21:51.11:0,51,553	0/0:30,1:30:52.16:0,52,776	0/0:20,0:21:54.01:0,54,576	0/0:9,0:9:24.05:0,24,256	0/0:10,0:10:30.08:0,30,332	0/0:13,0:13:33.07:0,33,356	0/0:16,0:15:39.09:0,39,423	0/0:16,0:16:45.09:0,45,478	0/0:21,0:21:60.12:0,60,639	0/0:15,0:15:39.05:0,39,408	0/0:13,1:14:16.34:0,16,406
chr10	89916847	.	G	GA	535.67	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.039;DP=506;FS=25.360;HRun=9;HaplotypeScore=64.2406;InbreedingCoeff=0.7777;MQ=78.47;MQ0=0;MQRankSum=0.561;QD=23.29;ReadPosRankSum=1.033;VQSLOD=2.2823;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:23:57.15:630,57,0	0/0:3,0:3:9:0,9,78	0/0:23,0:17:7.04:0,7,123	0/0:27,0:24:30.63:0,31,231	0/0:22,0:22:50.96:0,51,442	0/0:21,0:21:38.94:0,39,334	0/0:20,0:20:44.99:0,45,390	0/0:31,0:31:86.70:0,87,747	0/0:22,0:22:56.95:0,57,487	0/0:21,0:21:59.93:0,60,511	0/0:12,0:12:32.97:0,33,283	0/0:11,0:11:17.94:0,18,149	0/0:8,0:8:21:0,21,182	0/0:8,0:8:17.98:0,18,153	0/0:17,0:17:26.93:0,27,224	0/0:15,1:16:5.77:0,6,271	0/0:21,0:21:56.96:0,57,489	0/0:20,0:20:47.97:0,48,412	0/0:23,0:23:53.98:0,54,468	0/0:22,0:22:62.99:0,63,547	0/0:13,0:13:38.98:0,39,334	0/0:13,0:15:40.06:0,40,322	0/0:14,0:14:32.98:0,33,286	0/0:17,0:16:47.99:0,48,417	0/0:20,0:20:20.59:0,21,391	0/0:21,0:21:59.99:0,60,521	0/0:19,0:19:47.95:0,48,409	0/0:15,0:15:44.97:0,45,386
chr10	89918361	.	AT	A	6215.67	PASS	AB=0.793;AC=33;AF=0.589;AN=56;BaseQRankSum=12.110;DP=483;FS=0.000;HRun=9;HaplotypeScore=58.7475;InbreedingCoeff=0.8159;MQ=63.35;MQ0=0;MQRankSum=-1.528;QD=21.51;ReadPosRankSum=3.654;VQSLOD=5.4528;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:48.10:0,48,539	0/1:2,10:12:1.60:242,0,2	0/1:7,0:7:6.75:7,0,60	0/0:3,0:3:8.92:0,9,80	1/1:4,24:28:69.03:632,69,0	0/0:21,0:21:57.17:0,57,658	0/0:15,0:15:39.12:0,39,450	0/0:18,0:19:42.09:0,42,458	1/1:2,12:14:33.01:302,33,0	1/1:3,23:26:66.03:604,66,0	1/1:2,26:28:72.03:659,72,0	1/1:0,7:7:21.01:192,21,0	1/1:1,7:8:17.63:164,18,0	1/1:1,10:11:27.01:247,27,0	1/1:3,16:19:45.02:412,45,0	1/1:2,20:22:51.02:467,51,0	1/1:2,13:15:30.01:275,30,0	1/1:1,20:21:54.03:494,54,0	0/0:29,0:29:72.19:0,72,812	0/0:29,0:29:81.23:0,81,925	0/1:4,1:5:10.51:11,0,123	1/1:2,18:20:51.02:467,51,0	1/1:0,16:16:42.02:384,42,0	1/1:2,10:12:30.01:275,30,0	1/1:2,16:18:42.02:384,42,0	0/0:18,1:19:29.71:0,30,588	0/0:30,0:30:90.21:0,90,1013	0/0:8,0:8:21.06:0,21,242
chr10	89918461	.	AT	A	1345.49	PASS	AB=0.601;AC=17;AF=0.304;AN=56;BaseQRankSum=-11.634;DP=486;FS=6.777;HRun=15;HaplotypeScore=116.2038;InbreedingCoeff=0.6546;MQ=69.01;MQ0=7;MQRankSum=6.518;QD=7.16;ReadPosRankSum=3.124;VQSLOD=2.5613;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:24:24.82:71,25,0	0/0:0,0:5:8.52:0,9,42	0/0:35,0:12:19.86:0,20,133	0/0:25,0:11:14.32:0,14,94	0/0:19,0:34:54.28:0,54,292	1/1:3,11:14:20.62:134,21,0	1/1:3,12:18:9.49:148,9,0	1/1:3,11:17:12.21:180,12,0	0/0:1,0:11:20.54:0,21,111	0/0:25,0:24:37.80:0,38,161	0/0:13,0:13:13.51:0,14,58	0/0:1,0:8:16.53:0,17,80	0/0:4,0:12:22.14:0,22,113	0/0:10,0:21:41.66:0,42,201	0/0:7,0:17:36.56:0,37,198	0/0:11,1:13:11.65:0,12,125	0/0:10,0:16:28.42:0,28,143	0/0:8,0:11:14.47:0,14,85	0/1:9,9:18:9.51:135,0,10	1/1:7,18:26:0.97:260,1,0	1/1:1,9:10:17.73:115,18,0	0/0:6,0:22:43.85:0,44,223	0/0:7,0:13:18.40:0,18,87	0/0:3,0:9:11.08:0,11,53	0/0:7,0:7:13.67:0,14,63	1/1:10,15:25:0.86:233,1,0	0/1:7,17:27:2.07:201,0,2	0/1:2,5:9:27.60:50,0,28
chr10	89918462	.	T	TTC	4293.07	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=2.383;DP=496;FS=10.282;HRun=0;HaplotypeScore=120.7938;InbreedingCoeff=0.8216;MQ=68.54;MQ0=7;MQRankSum=-6.988;QD=18.11;ReadPosRankSum=-0.124;VQSLOD=4.0938;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:48.03:0,48,478	1/1:5,0:5:11.95:116,12,0	0/0:37,0:12:12.04:0,12,239	0/0:26,0:12:10.84:0,11,119	1/1:35,0:34:33.53:758,34,0	0/0:15,0:15:27.05:0,27,273	0/0:18,0:18:42.09:0,42,441	0/0:18,0:18:50.32:0,50,508	1/1:11,0:11:4.95:197,5,0	1/1:25,1:25:62.54:500,63,0	1/1:12,0:12:23.31:148,23,0	1/1:9,0:9:13.87:159,14,0	1/1:12,0:12:1.05:168,1,0	1/1:21,0:21:20.02:298,20,0	1/1:15,1:16:21.16:375,21,0	0/1:13,0:13:8.28:99,0,8	1/1:14,1:15:28.58:337,29,0	1/1:10,1:11:6.53:158,7,0	0/0:18,0:18:49.64:0,50,503	0/0:26,0:26:75.08:0,75,779	0/0:10,0:10:21.04:0,21,214	1/1:21,1:22:46.52:485,47,0	1/1:13,0:13:38.97:366,39,0	1/1:9,0:9:6.60:76,7,0	1/1:7,0:7:4.37:55,4,0	0/0:24,1:25:15.34:0,15,644	0/0:28,0:28:62.87:0,63,634	0/0:13,0:13:21.02:0,21,205
chr10	89918463	.	T	TC	3084.29	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=2.631;DP=497;FS=23.380;HRun=0;HaplotypeScore=117.5103;InbreedingCoeff=0.6014;MQ=68.27;MQ0=7;MQRankSum=-5.142;QD=13.18;ReadPosRankSum=1.562;VQSLOD=2.8531;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:50.91:0,51,421	1/1:5,0:5:11.75:72,12,0	0/0:38,0:13:26.41:0,26,220	0/0:28,0:12:13.65:0,14,134	1/1:35,0:34:21.98:479,22,0	0/0:15,0:15:29.99:0,30,261	0/0:18,0:18:41.99:0,42,378	0/0:18,0:18:53.98:0,54,483	0/1:11,0:11:13.18:90,0,13	1/1:4,22:25:65.79:660,66,0	1/1:0,11:11:23.70:230,24,0	1/1:9,0:9:13.91:87,14,0	0/1:10,0:10:0.69:82,0,1	0/1:21,0:21:9.60:108,0,10	0/1:16,0:16:32.17:156,0,32	1/1:7,6:13:30.45:292,30,0	1/1:15,0:15:11.03:199,11,0	0/1:11,0:11:19.89:88,0,20	0/0:17,0:17:51.01:0,51,478	0/0:26,0:26:77.95:0,78,707	0/0:10,0:10:21:0,21,183	1/1:21,0:21:24.36:290,24,0	1/1:13,0:13:38.56:275,39,0	0/1:9,0:9:0.78:39,0,1	1/1:3,5:8:9.55:143,10,0	0/0:26,1:27:3.62:0,4,565	0/0:28,0:28:53.14:0,53,538	0/0:14,0:14:32.93:0,33,271
chr10	89918500	.	T	TC	2836.21	PASS	AB=0.722;AC=28;AF=0.519;AN=54;BaseQRankSum=13.140;DP=372;FS=14.590;HRun=0;HaplotypeScore=79.4751;InbreedingCoeff=0.7825;MQ=85.82;MQ0=1;MQRankSum=-13.628;QD=20.70;ReadPosRankSum=3.834;VQSLOD=4.6745;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.26:0,84,1154	0/0:1,0:1:2.04:0,2,6	0/0:24,0:21:48.57:0,49,623	0/0:24,0:18:20.21:0,20,433	1/1:1,6:7:8.80:106,9,0	0/0:14,0:14:39.12:0,39,528	0/0:23,0:23:66.21:0,66,906	0/0:28,0:28:78.25:0,78,1076	1/1:0,7:7:18.05:195,18,0	1/1:1,11:12:33.10:394,33,0	1/1:0,4:4:12.04:185,12,0	1/1:1,3:4:9.02:98,9,0	1/1:0,6:6:18.05:193,18,0	1/1:3,11:14:24.81:299,25,0	1/1:1,14:15:39.07:399,39,0	0/1:3,12:15:6.69:347,0,7	1/1:3,13:16:31.97:369,32,0	1/1:2,4:6:9.03:104,9,0	0/0:24,0:24:72.23:0,72,984	0/0:15,0:15:45.14:0,45,612	0/0:14,0:14:39.11:0,39,527	1/1:1,3:4:12.02:139,12,0	./.	1/1:1,5:6:4.78:35,5,0	1/1:0,5:5:15.04:164,15,0	0/1:14,2:16:20.25:20,0,537	0/0:24,0:23:66.19:0,66,888	0/0:12,0:12:36.08:0,36,446
chr10	89918501	.	T	TCTAGA	9236.97	PASS	AB=0.889;AC=33;AF=0.589;AN=56;BaseQRankSum=12.431;DP=396;FS=17.065;HRun=0;HaplotypeScore=107.1176;InbreedingCoeff=0.8321;MQ=84.41;MQ0=1;MQRankSum=-13.777;QD=55.31;ReadPosRankSum=1.718;VQSLOD=4.3423;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.24:0,81,1614	1/1:1,0:1:3.01:67,3,0	0/0:23,0:21:41.01:0,41,906	0/0:23,0:19:35.33:0,35,654	1/1:4,4:8:12.04:249,12,0	0/0:14,0:14:36.11:0,36,728	0/0:23,0:23:63.22:0,63,1353	0/0:28,0:28:84.26:0,84,1695	1/1:6,6:12:30.10:795,30,0	1/1:2,11:13:33.01:858,33,0	1/1:0,4:4:12.04:206,12,0	1/1:2,3:5:9.03:239,9,0	1/1:3,6:9:24.08:620,24,0	1/1:7,9:16:42.13:988,42,0	1/1:4,12:16:45.15:1145,45,0	1/1:8,12:20:60.21:1494,60,0	1/1:9,12:21:51.18:1339,51,0	1/1:5,2:7:9.03:233,9,0	0/0:23,0:23:60.20:0,60,1263	0/0:15,0:15:45.15:0,45,962	0/0:13,0:13:36.12:0,36,781	1/1:2,3:5:12.04:283,12,0	1/1:1,0:1:3.01:49,3,0	1/1:4,4:8:6.02:156,6,0	1/1:0,5:5:15.05:399,15,0	0/1:14,2:16:99:117,0,789	0/0:25,0:24:69.20:0,69,1388	0/0:10,0:10:21.07:0,21,456
chr10	89920226	.	C	CT	1978.23	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-8.258;DP=538;FS=10.384;HRun=7;HaplotypeScore=52.1778;InbreedingCoeff=0.9635;MQ=67.53;MQ0=0;MQRankSum=1.094;QD=25.36;ReadPosRankSum=0.446;VQSLOD=3.4686;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,939	0/0:6,0:6:15:0,15,139	0/0:10,0:9:18.03:0,18,174	0/0:7,0:6:6:0,6,53	0/0:25,0:25:63.09:0,63,608	0/0:17,0:17:48.08:0,48,464	0/0:16,0:16:41.98:0,42,384	0/0:24,0:24:60.08:0,60,575	0/0:24,0:24:69.04:0,69,650	1/1:4,19:23:57.17:689,57,0	1/1:3,17:20:48.15:580,48,0	0/0:15,0:15:36.05:0,36,348	0/0:12,0:12:36.06:0,36,348	0/0:16,0:16:45.07:0,45,434	0/0:15,0:15:39.06:0,39,377	1/1:2,14:16:39.12:471,39,0	0/0:30,0:30:87.11:0,87,832	0/0:21,0:21:55.64:0,56,486	0/0:24,0:24:51.04:0,51,484	0/0:19,0:19:54.09:0,54,521	0/0:15,0:15:33.04:0,33,314	0/0:18,0:18:42.06:0,42,406	0/0:17,0:17:48.02:0,48,450	0/0:16,0:16:45.07:0,45,435	1/1:4,15:19:33.10:399,33,0	0/0:24,1:25:20.84:0,21,485	0/0:29,0:29:69.10:0,69,666	0/0:23,0:23:45.07:0,45,435
chr10	89921413	.	T	TTTG	2554.88	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=2.934;DP=441;FS=20.581;HRun=0;HaplotypeScore=100.1330;InbreedingCoeff=0.5473;MQ=51.45;MQ0=23;MQRankSum=-5.385;QD=11.46;ReadPosRankSum=4.391;VQSLOD=1.8131;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:49.15:0,49,779	1/1:1,0:1:2.99:24,3,0	0/1:44,0:11:2.44:2,0,117	0/1:57,0:11:2.82:3,0,78	0/1:30,0:29:48.53:49,0,176	0/0:7,0:6:8.92:0,9,63	0/0:8,0:8:20.87:0,21,159	0/0:23,0:19:44.82:0,45,364	0/1:13,0:13:3.57:4,0,181	1/1:11,0:10:30.07:503,30,0	1/1:6,0:6:15.05:272,15,0	0/0:17,0:16:3.53:0,4,284	0/1:12,0:11:30.09:30,0,100	0/0:12,0:12:9.15:0,9,201	1/1:3,12:14:24.07:516,24,0	1/1:9,0:8:15.05:283,15,0	1/1:9,9:17:42.11:791,42,0	0/0:13,0:12:19.69:0,20,197	0/0:13,0:13:30.27:0,30,252	0/0:14,0:13:30.50:0,31,246	0/0:9,0:6:11.97:0,12,100	0/0:13,0:13:3.92:0,4,286	0/0:23,0:21:23.48:0,23,396	0/0:10,0:9:17.99:0,18,216	1/1:7,0:7:15.05:265,15,0	0/0:15,0:13:28.47:0,28,232	0/0:10,0:9:15.78:0,16,111	0/0:3,0:2:3.90:0,4,42
chr10	89921419	.	G	GTTT	4876.50	PASS	AB=0.961;AC=41;AF=0.759;AN=54;BaseQRankSum=-1.874;DP=418;FS=13.666;HRun=9;HaplotypeScore=91.8929;InbreedingCoeff=0.3127;MQ=44.14;MQ0=28;MQRankSum=2.318;QD=16.09;ReadPosRankSum=2.033;VQSLOD=1.5529;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:28:34.06:131,34,0	./.	0/0:37,0:7:1.24:0,1,36	0/0:53,0:8:7.64:0,8,98	1/1:10,22:31:31.35:1132,31,0	0/1:6,0:5:0:0,0,0	0/1:7,0:7:0:0,0,0	0/0:20,0:15:0.49:0,0,2	1/1:7,4:11:22.30:347,22,0	1/1:10,0:9:0.23:9,0,0	1/1:7,0:7:2.43:6,2,0	1/1:12,4:16:36.04:551,36,0	1/1:4,7:10:24.07:431,24,0	1/1:6,3:11:24.01:323,24,0	1/1:11,0:10:19.56:69,20,0	1/1:8,0:7:3.43:9,3,0	1/1:15,0:14:19.34:70,19,0	1/1:9,4:13:24.02:376,24,0	0/1:12,0:11:10.85:33,0,11	1/1:12,0:11:3.68:15,4,0	0/1:11,0:6:0:0,0,0	1/1:8,5:13:27.08:475,27,0	0/1:15,9:20:19.53:726,0,20	1/1:8,2:9:14.47:141,14,0	1/1:7,0:7:1.05:5,1,0	0/1:13,0:11:0.34:0,0,0	1/1:10,0:9:2.37:8,2,0	0/1:3,0:2:13.13:17,0,13
chr10	89921438	.	GT	G	1322.62	PASS	AB=0.842;AC=25;AF=0.694;AN=36;BaseQRankSum=-0.633;DP=277;FS=7.112;HRun=10;HaplotypeScore=100.3531;InbreedingCoeff=0.3148;MQ=30.67;MQ0=39;MQRankSum=-0.680;QD=7.31;ReadPosRankSum=-1.526;VQSLOD=1.7519;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:27:54.94:0,55,292	./.	0/1:31,0:3:0.01:0,0,0	0/0:42,0:4:3:0,3,25	1/1:17,14:28:12.27:321,12,0	./.	1/1:1,0:1:2.92:17,3,0	./.	0/1:9,3:12:0.31:64,0,0	0/1:11,0:8:0.98:8,0,1	1/1:4,0:3:2.97:20,3,0	1/1:7,6:12:20.28:166,20,0	0/1:4,5:8:33.99:107,0,34	1/1:4,6:10:20.20:150,20,0	./.	1/1:7,0:6:3.47:10,3,0	1/1:1,0:1:2.22:7,2,0	0/1:9,4:12:0.44:130,0,0	./.	./.	./.	1/1:9,4:13:18.84:156,19,0	1/1:7,12:15:32.90:270,33,0	0/0:4,2:5:1.87:0,2,11	1/1:6,0:6:3.06:8,3,0	./.	./.	./.
chr10	89921452	.	T	TTTG	993.71	PASS	AC=26;AF=0.481;AN=54;BaseQRankSum=3.911;DP=309;FS=4.130;HRun=0;HaplotypeScore=95.1543;InbreedingCoeff=0.7468;MQ=36.13;MQ0=34;MQRankSum=-3.290;QD=11.83;ReadPosRankSum=-1.560;VQSLOD=2.9538;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:48.21:0,48,794	1/1:3,0:3:8.78:52,9,0	0/0:28,0:1:0.47:0,0,1	0/0:38,0:6:8.70:0,9,72	0/0:21,0:18:40.89:0,41,532	1/1:3,0:2:3.01:32,3,0	1/1:5,0:5:2.74:12,3,0	1/1:7,0:6:3.30:71,3,0	0/0:16,0:16:20.23:0,20,235	1/1:5,6:9:20.94:261,21,0	1/1:4,0:3:6.01:65,6,0	0/0:12,0:11:30.73:0,31,351	0/0:10,0:9:26:0,26,307	0/0:11,0:11:22.13:0,22,342	1/1:9,0:8:23.51:153,24,0	1/1:0,3:3:6.02:116,6,0	1/1:8,0:8:23.31:133,23,0	0/0:13,0:13:26.63:0,27,283	1/1:5,0:3:5.35:30,5,0	0/0:5,0:4:2.04:0,2,6	1/1:12,0:5:5.16:46,5,0	0/0:10,0:10:27.48:0,27,351	0/0:15,0:13:34.12:0,34,414	0/0:8,0:7:12.37:0,12,105	1/1:0,5:6:6.02:114,6,0	0/0:6,0:3:0.47:0,0,1	1/1:8,0:7:13.56:97,14,0	./.
chr10	89921463	.	T	TG	471.84	PASS	AB=0.961;AC=20;AF=0.357;AN=56;BaseQRankSum=-1.635;DP=322;FS=1.917;HRun=0;HaplotypeScore=82.0035;InbreedingCoeff=-0.2655;MQ=43.31;MQ0=22;MQRankSum=1.724;QD=2.18;ReadPosRankSum=1.710;VQSLOD=2.4584;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:59.49:0,59,731	0/0:3,0:3:8.65:0,9,46	1/1:21,0:3:4.82:36,5,0	0/0:26,0:3:5.83:0,6,37	0/1:20,0:17:47.51:48,0,63	0/0:4,0:3:4.25:0,4,36	0/1:5,1:6:9.42:16,0,9	0/1:13,0:12:6.27:6,0,20	0/1:17,0:17:30.06:32,0,30	1/1:11,1:10:3.53:56,4,0	0/0:7,0:6:1.25:0,1,3	0/1:11,0:11:24.12:43,0,24	0/1:10,0:9:36.95:37,0,40	0/1:10,0:10:10.26:10,0,73	0/0:11,0:11:22.72:0,23,126	0/0:4,0:4:6.45:0,6,20	0/0:10,0:10:22.87:0,23,133	0/1:12,0:12:0.41:0,0,120	0/1:12,1:12:31.45:31,0,78	0/1:5,0:5:0.04:0,0,11	0/1:9,2:8:27.05:69,0,27	0/1:10,0:10:44.44:47,0,44	0/1:14,0:12:6.44:48,0,6	0/1:10,0:9:21.73:47,0,22	0/0:7,0:7:5.33:0,5,16	0/1:7,2:7:50.94:51,0,67	0/1:9,1:9:31.51:41,0,32	0/0:7,0:4:6.91:0,7,34
chr10	89921467	.	G	GT	862.33	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=0.172;DP=330;FS=10.658;HRun=14;HaplotypeScore=80.1603;InbreedingCoeff=0.2837;MQ=47.02;MQ0=22;MQRankSum=-2.537;QD=3.87;ReadPosRankSum=-0.466;VQSLOD=0.2271;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,10:29:17.96:152,18,0	1/1:4,0:4:8.85:57,9,0	0/1:20,0:4:12.10:12,0,18	0/0:24,0:3:5.44:0,5,29	0/0:16,0:13:4.38:0,4,31	0/1:6,0:5:16.43:16,0,20	1/1:6,0:6:1.91:10,2,0	0/1:14,0:14:6.26:49,0,6	0/0:17,0:17:8.27:0,8,52	0/1:12,0:10:26.18:26,0,39	0/1:9,0:9:0.73:1,0,5	0/0:10,0:10:0.17:0,0,30	0/0:10,0:9:8.78:0,9,46	0/0:8,0:8:7.46:0,7,43	1/1:12,0:12:32.24:201,32,0	1/1:4,0:4:8.10:35,8,0	1/1:14,0:14:32.14:197,32,0	0/0:12,0:12:9.27:0,9,48	1/1:12,0:12:1.04:26,1,0	1/1:7,0:7:3.33:11,3,0	1/1:14,0:10:10.38:73,10,0	0/0:10,0:10:16.92:0,17,84	0/1:13,0:11:4.40:4,0,67	0/1:9,0:8:9.30:9,0,9	1/1:7,0:7:7.79:31,8,0	0/1:9,0:7:0.42:33,0,0	1/1:12,0:11:4.17:79,4,0	1/1:8,0:5:2.66:6,3,0
chr10	89921470	.	T	TTTG	728.89	PASS	AB=0.789;AC=14;AF=0.250;AN=56;BaseQRankSum=3.461;DP=333;FS=4.851;HRun=0;HaplotypeScore=91.1360;InbreedingCoeff=0.7487;MQ=48.23;MQ0=17;MQRankSum=-1.146;QD=8.68;ReadPosRankSum=2.769;VQSLOD=2.7429;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:26.86:0,27,296	1/1:4,0:4:5.45:16,5,0	0/1:18,0:4:13.68:14,0,60	0/0:23,0:3:5.80:0,6,76	0/0:15,0:13:28.43:0,28,268	0/0:6,0:6:10.47:0,10,70	0/0:6,0:6:8.24:0,8,48	0/0:15,0:15:25.41:0,25,189	0/0:18,0:18:20.99:0,21,252	1/1:12,0:10:25.68:262,26,0	0/1:3,8:10:2.98:136,0,3	0/0:10,0:10:29.94:0,30,337	0/0:10,0:9:26.88:0,27,284	0/0:8,0:8:20.91:0,21,238	1/1:12,0:12:20.43:57,20,0	1/1:5,0:5:12.02:198,12,0	1/1:15,0:15:20.12:57,20,0	0/0:13,0:13:23.08:0,23,242	0/0:13,0:12:28.98:0,29,178	0/0:7,0:7:10.18:0,10,68	0/0:13,0:10:21.95:0,22,130	0/0:10,0:10:30.01:0,30,400	0/0:14,0:12:27.84:0,28,364	0/0:10,0:9:13.32:0,13,118	1/1:7,0:7:9.03:169,9,0	0/0:8,0:7:15.06:0,15,91	0/0:12,0:12:21.82:0,22,125	0/0:9,0:6:13.99:0,14,83
chr10	89921472	.	T	TG	853.39	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=3.057;DP=330;FS=0.642;HRun=0;HaplotypeScore=80.4763;InbreedingCoeff=0.5698;MQ=49.05;MQ0=13;MQRankSum=-4.972;QD=12.55;ReadPosRankSum=5.287;VQSLOD=4.1083;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:4.62:0,5,183	1/1:0,4:4:9.03:112,9,0	0/1:16,0:4:21.76:22,0,55	0/0:22,0:3:5.97:0,6,60	0/0:14,0:13:31.20:0,31,242	0/0:7,0:7:16.57:0,17,156	0/0:6,0:6:8.34:0,8,54	0/0:15,0:15:28.72:0,29,234	0/0:19,0:19:23.83:0,24,220	0/1:9,0:9:11.62:12,0,82	0/0:11,0:10:8.80:0,9,47	0/0:10,0:10:29.77:0,30,252	0/0:10,0:9:26.88:0,27,243	0/0:8,0:8:20.84:0,21,193	1/1:0,12:12:33.10:408,33,0	0/1:5,0:5:9.46:24,0,9	1/1:0,15:15:33.10:409,33,0	0/0:14,0:14:28.13:0,28,248	0/0:13,0:12:26.53:0,27,211	0/0:7,0:7:11.82:0,12,79	0/0:12,0:10:16.19:0,16,109	0/0:10,0:10:29.97:0,30,313	0/0:15,0:13:30.64:0,31,299	0/0:11,0:10:20.35:0,20,138	1/1:7,0:7:7.79:31,8,0	0/0:8,0:7:14.49:0,14,130	0/0:12,0:12:28.05:0,28,209	0/0:9,0:7:17.83:0,18,128
chr10	89921639	.	T	TTGTGCG	1538	PASS	AB=0.967;AC=14;AF=0.269;AN=52;BaseQRankSum=5.330;DP=465;FS=17.416;HRun=0;HaplotypeScore=140.9543;InbreedingCoeff=-0.2349;MQ=58.00;MQ0=6;MQRankSum=-1.874;QD=6.72;ReadPosRankSum=2.240;VQSLOD=1.7870;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:16,0:8:21.06:0,21,355	0/1:18,0:12:10.92:11,0,297	0/0:18,0:18:12.02:0,12,202	0/1:19,0:19:97.32:207,0,97	0/1:16,0:16:14.17:122,0,14	0/1:26,0:24:69.48:69,0,161	0/0:25,0:25:24.03:0,24,332	0/1:19,0:20:69.71:202,0,70	0/0:18,0:18:11.96:0,12,95	0/0:20,0:19:18.03:0,18,286	0/0:11,0:11:3.01:0,3,55	0/0:8,0:8:9.03:0,9,177	0/1:10,8:21:58.84:144,0,59	0/0:7,0:7:2.98:0,3,22	0/1:14,0:14:52.90:58,0,53	0/0:15,0:15:3.90:0,4,59	0/1:20,0:18:63.98:64,0,102	1/1:19,0:19:11.76:190,12,0	0/1:11,0:11:13.99:18,0,14	0/0:16,0:16:18:0,18,221	0/0:15,0:15:21.36:0,21,205	0/0:18,0:18:5.99:0,6,48	0/0:10,0:10:8.98:0,9,72	0/1:22,0:21:57.84:374,0,58	0/1:18,0:18:27.08:185,0,27	0/1:5,0:5:18.94:43,0,19
chr10	89921644	.	C	CGTGTGTGT	4052.20	PASS	AB=1.000;AC=26;AF=0.591;AN=44;BaseQRankSum=-1.982;DP=486;FS=7.635;HRun=0;HaplotypeScore=150.9824;InbreedingCoeff=0.5805;MQ=55.21;MQ0=12;MQRankSum=-0.355;QD=16.34;ReadPosRankSum=-0.778;VQSLOD=2.2807;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:16,0:8:12.02:0,12,231	0/1:17,0:11:32.37:32,0,214	0/0:18,0:18:9.03:0,9,192	1/1:19,0:19:11.19:465,11,0	1/1:19,0:19:11.27:222,11,0	1/1:28,0:26:35.89:471,36,0	0/0:28,0:28:12.04:0,12,220	1/1:7,10:21:26.70:578,27,0	./.	0/0:20,0:18:7.21:0,7,233	0/0:11,0:11:2.57:0,3,56	0/0:12,0:12:9.03:0,9,191	1/1:22,0:22:9.03:204,9,0	./.	1/1:8,5:14:3.01:108,3,0	0/1:14,0:14:9.56:10,0,50	1/1:16,0:14:17.73:210,18,0	1/1:18,0:18:12.04:342,12,0	1/1:13,0:12:3.01:49,3,0	0/0:16,0:16:6.02:0,6,134	0/0:16,0:16:6.49:0,6,96	./.	./.	1/1:22,0:21:44.50:891,44,0	1/1:18,0:18:20.82:376,21,0	1/1:5,0:5:3.01:95,3,0
chr10	89921660	.	TGTGAGAGAGAGAGA	T	2356.96	PASS	AB=0.747;AC=15;AF=0.288;AN=52;BaseQRankSum=1.112;DP=448;FS=9.189;HRun=0;HaplotypeScore=142.2434;InbreedingCoeff=0.1830;MQ=49.67;MQ0=15;MQRankSum=-3.705;QD=12.60;ReadPosRankSum=3.667;VQSLOD=1.9126;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:33:3.01:0,3,39	0/0:6,0:5:3.01:0,3,74	0/0:10,0:4:12:0,12,108	0/0:13,0:9:15.01:0,15,164	0/1:5,0:21:8.65:123,0,9	0/0:15,0:15:11.79:0,12,177	0/0:18,0:18:10.58:0,11,88	0/0:22,0:20:47.32:0,47,334	0/1:9,17:28:9.50:450,0,9	0/0:23,0:22:47.40:0,47,1065	0/0:12,0:12:7.27:0,7,261	1/1:6,15:19:17.71:703,18,0	1/1:1,10:12:6.02:225,6,0	0/1:1,9:10:4.96:248,0,5	0/1:18,0:18:21.79:22,0,402	0/0:9,0:9:6.02:0,6,346	0/0:11,0:10:6.47:0,6,161	1/1:2,14:16:5.98:253,6,0	0/1:16,0:12:81.34:170,0,81	0/0:16,0:16:10.32:0,10,73	0/0:17,0:16:3:0,3,25	0/1:2,11:14:18.49:103,0,18	1/1:1,10:11:6.02:175,6,0	./.	./.	0/1:19,0:18:40.22:40,0,284	0/0:18,0:18:8.54:0,9,134	0/0:4,0:4:4.57:0,5,52
chr10	89921662	.	TGAGAGAGAGAGAGA	T	2335.43	PASS	AB=0.887;AC=22;AF=0.478;AN=46;BaseQRankSum=1.632;DP=437;FS=2.143;HRun=0;HaplotypeScore=137.2925;InbreedingCoeff=0.1922;MQ=48.10;MQ0=15;MQRankSum=-2.344;QD=9.98;ReadPosRankSum=2.712;VQSLOD=2.6966;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:3.01:0,3,58	0/0:5,0:5:5.98:0,6,118	./.	./.	1/1:20,0:21:2.74:106,3,0	0/1:12,1:15:26.42:32,0,26	1/1:12,0:18:0.89:2,1,0	0/0:21,0:19:0:0,0,0	1/1:24,1:27:12.04:408,12,0	0/0:23,0:22:35.91:0,36,1053	0/0:13,0:13:7.27:0,7,303	1/1:21,1:19:18.04:663,18,0	1/1:12,0:12:6.02:206,6,0	1/1:10,0:10:6.02:220,6,0	0/1:16,0:16:6.67:7,0,365	0/0:9,0:9:6.02:0,6,393	0/0:11,0:10:6.49:0,6,180	1/1:15,0:16:6.02:213,6,0	0/1:12,0:11:23.27:233,0,23	0/0:14,1:16:1.36:0,1,3	./.	0/1:14,0:14:13.50:93,0,13	1/1:10,1:11:6.02:173,6,0	./.	./.	0/1:17,0:18:32.91:101,0,33	0/1:12,5:18:16.86:23,0,17	0/0:4,0:4:4.81:0,5,30
chr10	89922144	.	TTAA	T	1936.03	PASS	AB=0.767;AC=8;AF=0.143;AN=56;BaseQRankSum=-2.008;DP=495;FS=1.209;HRun=0;HaplotypeScore=90.4062;InbreedingCoeff=0.7897;MQ=69.75;MQ0=10;MQRankSum=-3.155;QD=23.61;ReadPosRankSum=1.857;VQSLOD=3.7592;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:37.15:0,37,188	0/0:8,0:8:21:0,21,229	0/0:41,0:13:26.97:0,27,334	0/0:32,0:14:22.19:0,22,215	0/0:20,0:20:54.14:0,54,960	0/0:18,0:17:49.07:0,49,283	0/0:14,0:14:34.56:0,35,206	0/0:40,0:38:76.29:0,76,747	0/0:11,0:11:33.08:0,33,618	0/1:2,13:15:1.70:475,0,2	1/1:5,10:14:39.08:600,39,0	0/0:11,0:11:33.06:0,33,548	0/0:8,0:8:24.04:0,24,468	0/0:8,0:8:24.05:0,24,446	0/0:11,0:10:26.97:0,27,272	1/1:2,21:22:39.13:688,39,0	0/0:30,0:31:80.96:0,81,965	0/0:21,0:21:60.03:0,60,1089	0/1:17,0:16:6.46:6,0,200	0/0:16,0:15:35.61:0,36,214	0/0:14,0:14:37.24:0,37,242	0/0:6,0:6:18.02:0,18,242	0/0:12,0:12:30.07:0,30,571	0/0:7,0:7:21.05:0,21,457	1/1:1,10:11:18.06:317,18,0	0/0:22,0:22:52.37:0,52,382	0/0:23,0:23:53.24:0,53,347	0/0:21,0:20:54.92:0,55,329
chr10	89922145	.	TAA	T	4052.40	PASS	AB=0.801;AC=26;AF=0.464;AN=56;BaseQRankSum=1.292;DP=498;FS=11.949;HRun=14;HaplotypeScore=74.3188;InbreedingCoeff=0.7203;MQ=69.23;MQ0=14;MQRankSum=-0.956;QD=13.46;ReadPosRankSum=4.521;VQSLOD=1.3542;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:18:39.04:361,39,0	0/0:2,0:7:9.83:0,10,34	0/0:41,0:13:14.99:0,15,131	0/1:31,0:14:5.41:5,0,102	0/0:19,1:21:38.62:0,39,509	1/1:3,15:17:42.02:389,42,0	1/1:3,11:14:27.02:250,27,0	0/1:19,21:37:99:451,0,128	0/0:12,0:11:26.44:0,26,324	0/1:16,0:15:11.51:121,0,12	1/1:14,0:13:29.10:165,29,0	0/0:12,0:12:23.55:0,24,285	0/0:8,0:8:18.05:0,18,239	0/0:8,0:8:15.05:0,15,210	0/0:5,0:9:9.98:0,10,35	1/1:23,0:22:37.91:215,38,0	0/0:9,2:30:21.16:0,21,175	0/0:21,0:22:44.57:0,45,541	1/1:3,13:16:20.52:324,21,0	1/1:6,10:15:26.74:249,27,0	1/1:4,9:13:23.96:222,24,0	0/0:5,0:6:12.01:0,12,133	0/0:12,0:12:24.06:0,24,318	0/0:7,0:7:18.06:0,18,252	1/1:12,0:12:17.48:99,17,0	1/1:6,14:21:41.46:368,41,0	1/1:6,17:23:48.01:444,48,0	0/1:4,18:20:6.02:390,0,6
chr10	89922448	.	C	CA	2534.80	PASS	AB=0.646;AC=34;AF=0.654;AN=52;BaseQRankSum=-1.269;DP=322;FS=12.343;HRun=12;HaplotypeScore=48.1441;InbreedingCoeff=0.3744;MQ=46.75;MQ0=22;MQRankSum=0.132;QD=10.61;ReadPosRankSum=-0.392;VQSLOD=1.1563;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:7,18:23:1.62:307,0,2	./.	0/0:5,0:3:2.21:0,2,7	0/0:7,0:4:2.15:0,2,20	1/1:6,0:11:19.89:99,20,0	1/1:2,11:13:24:224,24,0	0/1:7,8:12:28.35:148,0,28	1/1:4,4:4:5.60:39,6,0	1/1:2,0:3:5.68:28,6,0	0/0:18,0:11:26.82:0,27,197	0/0:17,0:16:32.79:0,33,239	1/1:3,0:6:8.52:43,9,0	1/1:2,0:5:8.62:46,9,0	1/1:3,1:3:5.85:43,6,0	1/1:4,8:11:21:195,21,0	0/0:17,0:14:18.04:0,18,182	0/1:6,4:8:9.84:75,0,10	1/1:2,1:6:11.69:86,12,0	1/1:12,6:12:5.04:189,5,0	0/1:8,9:15:16.77:177,0,17	1/1:3,11:15:23.82:207,24,0	./.	1/1:2,2:2:6.01:57,6,0	1/1:2,0:13:22.73:114,23,0	0/0:10,0:11:16.92:0,17,115	0/1:9,13:20:1.73:308,0,2	0/1:4,5:9:9.77:76,0,10	1/1:2,12:13:8.15:241,8,0
chr10	89922534	.	G	GTA	306.25	PASS	AB=0.915;AC=24;AF=0.545;AN=44;BaseQRankSum=2.672;DP=128;FS=24.406;HRun=0;HaplotypeScore=108.8720;InbreedingCoeff=0.2959;MQ=27.93;MQ0=4;MQRankSum=0.010;QD=3.37;ReadPosRankSum=0.694;VQSLOD=0.9194;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:7:2.84:3,0,12	./.	./.	./.	./.	0/1:6,2:8:0.78:97,0,1	1/1:5,1:6:6.31:71,6,0	0/1:5,0:4:0.41:0,0,16	0/0:5,0:4:5.73:0,6,57	1/1:6,0:5:0.82:2,1,0	1/1:4,0:4:3.01:41,3,0	0/0:6,0:6:11.92:0,12,110	0/0:3,0:3:1.82:0,2,5	0/0:6,0:5:2.29:0,2,37	1/1:7,0:6:2.50:9,2,0	0/1:4,1:5:0:0,0,0	0/0:6,0:6:11.92:0,12,103	0/0:2,0:2:5.88:0,6,37	1/1:4,0:3:4.72:21,5,0	0/1:5,1:5:19.95:31,0,20	1/1:11,1:11:0.94:3,1,0	0/1:2,0:2:0:0,0,0	./.	1/1:7,0:7:0.74:3,1,0	1/1:3,0:3:2.94:18,3,0	1/1:8,1:9:2.80:124,3,0	0/0:3,0:3:0.65:0,1,1	./.
chr10	89923209	.	CG	C	731.43	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=1.957;DP=198;FS=33.364;HRun=2;HaplotypeScore=38.5224;InbreedingCoeff=0.6502;MQ=62.08;MQ0=1;MQRankSum=0.816;QD=20.90;ReadPosRankSum=3.058;VQSLOD=1.7794;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:30.07:0,30,409	1/1:0,2:2:6.02:77,6,0	0/1:5,0:3:0.93:1,0,32	0/0:10,0:3:2.86:0,3,45	0/0:2,0:2:6.02:0,6,86	0/0:4,0:4:9.03:0,9,134	0/0:5,0:5:15.04:0,15,205	0/0:16,0:16:48.12:0,48,693	0/0:5,0:4:12.03:0,12,158	0/0:0,0:8:23.12:0,23,128	0/0:3,0:5:11.08:0,11,56	0/0:4,0:4:12.03:0,12,159	0/0:7,0:7:18.05:0,18,248	0/0:6,0:6:18.05:0,18,249	1/1:0,5:5:12.04:156,12,0	0/0:1,0:4:5.75:0,6,30	1/1:0,23:23:50.60:626,51,0	0/0:14,0:14:36.12:0,36,536	0/0:18,0:17:18.06:0,18,284	0/0:6,0:6:17.99:0,18,241	0/0:4,0:4:9.03:0,9,135	./.	0/0:3,0:3:9.03:0,9,134	0/0:4,0:4:12.02:0,12,159	0/0:0,0:5:14.38:0,14,74	0/0:5,0:5:15.05:0,15,224	0/0:12,0:12:30.03:0,30,402	0/0:5,0:5:15.05:0,15,223
chr10	89923224	.	A	AAAAT	2392.55	PASS	AC=28;AF=0.778;AN=36;BaseQRankSum=-3.551;DP=184;FS=0.000;HRun=0;HaplotypeScore=45.6019;InbreedingCoeff=0.4202;MQ=59.32;MQ0=5;MQRankSum=0.839;QD=18.26;ReadPosRankSum=-0.168;VQSLOD=2.7819;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:12.03:0,12,129	1/1:3,0:3:3.48:63,3,0	./.	./.	1/1:1,1:2:3.01:70,3,0	1/1:4,0:4:3.01:53,3,0	./.	1/1:29,0:27:5.42:23,5,0	./.	0/0:8,0:7:3:0,3,28	0/0:4,0:4:2.50:0,2,9	1/1:3,1:4:3.01:70,3,0	1/1:3,2:5:3.01:70,3,0	./.	1/1:6,0:6:9.03:186,9,0	./.	1/1:25,0:24:19:373,19,0	1/1:7,12:20:30.10:697,30,0	1/1:4,3:6:9.03:204,9,0	1/1:5,1:6:3.01:70,3,0	./.	./.	./.	./.	0/0:6,0:6:0.89:0,1,2	1/1:4,3:7:9.03:209,9,0	1/1:7,0:7:3.01:69,3,0	1/1:1,5:6:15.05:347,15,0
chr10	89923276	.	T	TAAAC	2288.31	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=-2.260;DP=281;FS=47.321;HRun=0;HaplotypeScore=63.5052;InbreedingCoeff=0.1082;MQ=72.34;MQ0=0;MQRankSum=-2.845;QD=14.86;ReadPosRankSum=4.259;VQSLOD=1.4573;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:41.92:0,42,359	1/1:3,1:4:11.99:159,12,0	0/0:12,0:11:29.81:0,30,260	0/0:9,0:9:24.01:0,24,245	0/1:6,0:6:27.78:28,0,102	0/0:5,0:5:14.91:0,15,113	0/0:5,0:5:11.97:0,12,97	0/0:25,0:25:68.69:0,69,542	0/0:6,0:6:17.98:0,18,149	0/0:9,0:9:26.98:0,27,232	0/0:8,0:8:20.58:0,21,128	0/1:5,0:5:29.77:30,0,84	0/1:4,0:4:32.75:33,0,63	0/0:6,0:6:14.95:0,15,119	1/1:2,4:7:8.89:259,9,0	0/0:3,0:3:8.98:0,9,73	1/1:32,5:36:99:1107,104,0	0/1:28,0:28:99:428,0,287	0/1:16,0:15:86.01:86,0,220	0/1:10,0:10:14.60:15,0,185	0/0:7,0:7:17.95:0,18,143	0/0:3,0:3:8.98:0,9,73	0/0:8,0:8:23.97:0,24,199	./.	0/0:4,0:4:2.97:0,3,20	0/1:11,0:11:95.78:96,0,164	0/1:4,0:4:38.14:38,0,60	0/1:22,0:22:99:178,0,310
chr10	89924443	.	T	TA	204.36	PASS	AC=24;AF=1.000;AN=24;DP=42;FS=0.000;HRun=0;HaplotypeScore=11.1183;InbreedingCoeff=-0.0847;MQ=41.48;MQ0=0;QD=7.30;VQSLOD=2.4988;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,1:1:2.94:18,3,0	./.	./.	./.	./.	1/1:0,1:1:2.74:12,3,0	./.	./.	1/1:0,1:1:2.80:13,3,0	./.	1/1:2,1:3:2.80:13,3,0	./.	1/1:3,0:3:2.99:24,3,0	./.	1/1:0,2:2:2.84:14,3,0	./.	./.	./.	1/1:0,1:1:2.84:14,3,0	1/1:3,3:6:8.45:43,8,0	./.	./.	1/1:1,2:3:5.74:36,6,0	1/1:3,0:3:3:26,3,0	1/1:1,0:1:2.99:24,3,0	1/1:2,1:3:5.90:40,6,0	./.
chr10	89926801	.	T	TAA	3680.61	PASS	AB=0.751;AC=31;AF=0.554;AN=56;BaseQRankSum=0.513;DP=411;FS=6.842;HRun=12;HaplotypeScore=56.2305;InbreedingCoeff=0.7828;MQ=58.79;MQ0=3;MQRankSum=0.494;QD=14.43;ReadPosRankSum=-1.308;VQSLOD=1.6153;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:74.89:0,75,675	1/1:3,0:11:14.97:52,15,0	0/0:11,0:6:9:0,9,79	0/1:5,0:3:4.58:5,0,22	0/0:25,0:25:41.93:0,42,388	1/1:1,12:16:23.05:270,23,0	1/1:2,8:13:14.99:174,15,0	1/1:9,13:22:37.82:444,38,0	0/0:12,0:12:33.03:0,33,305	1/1:4,0:20:29.61:118,30,0	1/1:6,1:16:22.81:90,23,0	0/0:7,0:7:17.98:0,18,167	0/0:10,0:10:20.98:0,21,194	0/0:6,0:6:15.01:0,15,139	1/1:0,0:7:14.97:52,15,0	0/1:2,0:14:4.55:48,0,5	1/1:7,1:21:37.86:168,38,0	0/0:18,0:17:38.25:0,38,339	1/1:4,11:15:34.64:435,35,0	1/1:5,15:22:41.95:526,42,0	1/1:1,12:13:27.09:366,27,0	0/0:8,0:8:18.49:0,18,167	0/0:16,0:16:35.97:0,36,333	0/0:8,0:8:14.92:0,15,138	1/1:3,0:17:0.19:59,0,0	1/1:7,13:19:36.99:482,37,0	0/1:9,3:13:2.93:225,0,3	1/1:0,5:7:12.04:168,12,0
chr10	89926910	.	T	TAC	1659.94	PASS	AB=0.884;AC=42;AF=0.808;AN=52;BaseQRankSum=-0.631;DP=592;FS=0.986;HRun=0;HaplotypeScore=97.9994;InbreedingCoeff=0.0090;MQ=53.14;MQ0=30;MQRankSum=2.064;QD=3.77;ReadPosRankSum=1.373;VQSLOD=2.2240;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:40:6.06:0,6,27	1/1:5,0:4:2.98:21,3,0	./.	./.	1/1:13,5:17:6.02:85,6,0	1/1:14,0:14:6.33:40,6,0	0/0:23,0:20:2.20:0,2,8	1/1:18,0:18:2.88:15,3,0	0/1:27,9:35:99:109,0,117	1/1:19,0:17:8:33,8,0	1/1:14,0:14:2.70:7,3,0	0/1:11,4:15:36.27:36,0,55	0/1:13,0:13:44.59:74,0,45	1/1:9,4:13:3.01:44,3,0	1/1:22,0:22:11.99:102,12,0	1/1:26,0:25:22.86:92,23,0	0/1:21,0:28:14.40:131,0,14	1/1:13,9:25:5.15:174,5,0	1/1:14,0:12:2.74:12,3,0	1/1:9,0:8:3.18:27,3,0	1/1:45,0:43:15.92:111,16,0	0/1:10,0:9:26.40:38,0,26	0/1:13,1:14:40.10:85,0,40	1/1:26,4:26:24.89:306,25,0	1/1:13,0:13:6.13:15,6,0	1/1:10,0:10:11.92:87,12,0	1/1:22,0:21:24.26:146,24,0	1/1:5,0:4:1.25:3,1,0
chr10	89926944	.	C	CCAA	4773.55	PASS	AB=0.739;AC=25;AF=0.446;AN=56;BaseQRankSum=-1.207;DP=653;FS=6.856;HRun=0;HaplotypeScore=89.6705;InbreedingCoeff=0.6713;MQ=51.31;MQ0=62;MQRankSum=0.041;QD=14.87;ReadPosRankSum=0.059;VQSLOD=3.9066;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:33:15.48:0,15,271	0/0:8,0:7:15.05:0,15,255	0/1:35,0:9:13.79:14,0,239	0/0:47,0:14:35.95:0,36,581	0/0:18,0:17:23.77:0,24,359	1/1:2,10:13:9.01:196,9,0	0/1:13,3:27:30.70:109,0,31	0/1:10,19:28:99:815,0,117	0/0:34,0:33:68.96:0,69,1097	1/1:7,8:13:4.14:395,4,0	1/1:3,5:7:11.95:188,12,0	0/0:16,0:16:29.31:0,29,468	0/0:14,0:14:29.89:0,30,415	0/0:15,0:14:30:0,30,435	0/0:19,0:19:33.49:0,33,496	1/1:9,18:23:35.54:713,36,0	0/0:33,0:32:60.24:0,60,960	0/0:27,0:26:53.95:0,54,797	1/1:6,1:19:13.44:702,13,0	1/1:4,2:12:15.41:185,15,0	1/1:17,4:59:8.80:417,9,0	0/0:5,0:4:8.98:0,9,130	0/0:12,0:12:30.04:0,30,463	0/0:46,0:42:99:0,102,1553	1/1:6,5:10:11.97:148,12,0	1/1:5,0:12:3.16:352,3,0	1/1:4,4:16:27.05:488,27,0	1/1:2,1:8:3.01:53,3,0
chr10	89927244	.	A	AC	1175.45	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=6.402;DP=451;FS=11.848;HRun=2;HaplotypeScore=63.0920;InbreedingCoeff=0.9136;MQ=55.07;MQ0=11;MQRankSum=-2.412;QD=31.77;ReadPosRankSum=1.386;VQSLOD=2.3200;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,1227	1/1:1,3:4:9.03:129,9,0	./.	0/0:25,0:11:27.51:0,28,298	0/0:11,0:11:24.08:0,24,296	0/0:10,0:10:27.07:0,27,321	0/0:23,0:21:54.17:0,54,668	0/0:24,0:23:54.13:0,54,652	0/0:13,0:13:36.10:0,36,434	0/0:9,0:8:24.08:0,24,298	0/0:7,0:7:12.04:0,12,149	0/0:18,0:18:48.15:0,48,595	0/0:9,0:9:24.08:0,24,297	0/0:13,0:13:36.11:0,36,446	1/1:3,11:14:36.12:518,36,0	0/0:22,0:21:60.19:0,60,741	1/1:1,18:19:51.05:665,51,0	0/0:22,0:22:60.15:0,60,726	0/0:19,0:18:48.09:0,48,563	0/0:11,0:11:27.08:0,27,334	0/0:43,0:43:99:0,114,1412	0/0:2,0:2:6.02:0,6,74	0/0:6,0:6:15.05:0,15,184	0/0:27,0:26:81.24:0,81,991	0/0:12,0:12:36.11:0,36,446	0/0:17,0:17:48.15:0,48,592	0/0:19,0:17:45.12:0,45,544	0/0:6,0:6:12.04:0,12,149
chr10	89927402	.	TTG	T	5056.19	PASS	AB=1.000;AC=49;AF=0.942;AN=52;BaseQRankSum=-0.192;DP=211;FS=2.922;HRun=0;HaplotypeScore=91.7499;InbreedingCoeff=0.2553;MQ=62.04;MQ0=1;MQRankSum=-3.661;QD=24.91;ReadPosRankSum=2.628;VQSLOD=5.8757;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:4:9.61:33,10,0	1/1:1,5:6:15.02:188,15,0	0/1:9,0:9:7.18:7,0,114	0/0:3,0:3:5.21:0,5,31	1/1:5,8:11:29.93:326,30,0	1/1:0,6:6:18.03:229,18,0	1/1:0,10:8:24.08:333,24,0	./.	1/1:1,3:4:11.53:133,12,0	1/1:18,1:18:17.56:146,18,0	1/1:9,0:9:2.72:54,3,0	1/1:0,2:2:6.02:83,6,0	1/1:0,1:1:3.01:42,3,0	1/1:3,4:7:18.02:223,18,0	1/1:1,6:7:18.06:250,18,0	1/1:3,0:2:2.98:21,3,0	1/1:0,12:12:33.07:437,33,0	1/1:1,10:10:30.10:417,30,0	1/1:2,10:10:26.68:343,27,0	1/1:1,10:11:33.07:436,33,0	1/1:0,3:3:6.02:84,6,0	1/1:1,1:2:3.01:42,3,0	1/1:0,2:2:5.98:61,6,0	./.	1/1:10,0:10:1.57:67,2,0	1/1:3,10:13:32.56:399,33,0	1/1:2,13:12:36.03:455,36,0	1/1:4,7:10:20.99:249,21,0
chr10	89927403	.	TG	T	3695.30	PASS	AB=1.000;AC=49;AF=0.942;AN=52;BaseQRankSum=0.093;DP=201;FS=0.000;HRun=1;HaplotypeScore=92.4381;InbreedingCoeff=0.2812;MQ=63.05;MQ0=1;MQRankSum=-4.239;QD=18.95;ReadPosRankSum=2.896;VQSLOD=3.9316;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:4:12.04:160,12,0	1/1:6,0:6:14.57:83,15,0	0/1:9,0:9:29.62:30,0,84	0/0:3,0:3:4.96:0,5,20	1/1:12,1:11:29.44:200,29,0	1/1:6,0:6:17.60:106,18,0	1/1:10,0:8:23.40:136,23,0	./.	1/1:3,1:4:11.80:93,12,0	1/1:2,15:17:40.20:609,40,0	1/1:2,6:8:23.06:270,23,0	1/1:2,0:2:5.85:35,6,0	1/1:1,0:1:2.94:18,3,0	1/1:5,1:6:17.68:111,18,0	1/1:6,0:6:17.55:102,18,0	1/1:1,2:2:5.95:42,6,0	1/1:12,0:12:32.21:190,32,0	1/1:11,0:10:29.26:173,29,0	1/1:10,1:9:26.41:178,26,0	1/1:11,0:11:32.21:190,32,0	1/1:3,0:3:5.85:34,6,0	1/1:1,0:1:2.94:18,3,0	1/1:2,0:2:5.89:37,6,0	./.	1/1:1,9:10:19.18:337,19,0	1/1:11,1:12:32.18:210,32,0	1/1:14,1:12:35.13:209,35,0	1/1:11,0:10:20.57:126,21,0
chr10	89927409	.	A	AT	1128.11	PASS	AC=18;AF=0.333;AN=54;BaseQRankSum=-0.648;DP=210;FS=0.000;HRun=5;HaplotypeScore=111.8249;InbreedingCoeff=0.8041;MQ=61.83;MQ0=0;MQRankSum=-1.549;QD=23.50;ReadPosRankSum=0.130;VQSLOD=1.8876;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,6:6:12:137,12,0	0/0:7,0:7:18.05:0,18,193	0/0:9,0:9:14.45:0,14,121	0/0:3,0:3:2.62:0,3,16	1/1:3,10:11:24.08:312,24,0	0/0:7,0:7:18.04:0,18,193	0/0:10,0:8:24.06:0,24,257	0/0:5,0:3:5.94:0,6,40	1/1:1,4:4:9.03:118,9,0	0/0:18,0:18:48.12:0,48,515	0/0:7,0:7:21.05:0,21,225	1/1:0,2:2:6.02:79,6,0	1/1:1,1:2:3.01:39,3,0	1/1:0,5:5:15.05:195,15,0	0/0:7,0:7:18.04:0,18,193	0/0:3,0:2:6.02:0,6,64	0/0:12,0:12:33.06:0,33,345	1/1:2,8:10:24.08:316,24,0	0/0:11,0:9:21.05:0,21,226	0/0:12,0:12:30.07:0,30,322	0/0:3,0:3:6.02:0,6,64	1/1:0,1:1:3.01:39,3,0	1/1:1,2:3:6.02:79,6,0	./.	0/0:10,0:10:30.05:0,30,312	0/0:14,0:14:36.09:0,36,386	0/0:16,0:12:29.66:0,30,283	0/0:8,0:7:21.05:0,21,225
chr10	89927479	.	T	TA	4860.18	PASS	AC=50;AF=0.962;AN=52;BaseQRankSum=-0.858;DP=148;FS=5.013;HRun=3;HaplotypeScore=69.7214;InbreedingCoeff=0.2076;MQ=38.05;MQ0=0;MQRankSum=-1.732;QD=34.47;ReadPosRankSum=1.607;VQSLOD=5.5619;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,5:6:9.03:132,9,0	1/1:0,7:7:21.07:313,21,0	./.	0/0:1,0:1:2.37:0,2,8	1/1:0,16:16:39.13:572,39,0	1/1:0,4:4:12.04:179,12,0	1/1:0,2:2:3.01:45,3,0	1/1:0,2:2:6.02:89,6,0	1/1:0,4:3:9.03:134,9,0	1/1:0,8:8:24.08:357,24,0	1/1:0,8:8:24.08:357,24,0	1/1:0,5:5:12.04:179,12,0	1/1:0,5:5:15.05:216,15,0	1/1:1,2:3:6.02:89,6,0	1/1:0,3:3:6.02:90,6,0	1/1:0,3:2:6.02:89,6,0	1/1:0,3:3:9.03:133,9,0	1/1:2,4:6:9.03:127,9,0	1/1:1,1:2:3.01:45,3,0	1/1:0,4:4:12.04:179,12,0	./.	1/1:0,2:2:6.02:89,6,0	1/1:0,6:6:15.05:225,15,0	1/1:0,3:3:3.01:43,3,0	1/1:0,6:6:17.99:243,18,0	1/1:1,10:9:27.09:399,27,0	1/1:0,16:10:18.06:268,18,0	1/1:0,6:6:18.06:270,18,0
chr10	89927598	.	TTG	T	427.30	PASS	AB=0.928;AC=21;AF=0.438;AN=48;BaseQRankSum=2.081;DP=197;FS=26.296;HRun=0;HaplotypeScore=46.8955;InbreedingCoeff=-0.1498;MQ=36.27;MQ0=4;MQRankSum=0.760;QD=2.91;ReadPosRankSum=4.826;VQSLOD=0.3313;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,1:16:40.62:41,0,85	0/0:1,0:1:2.92:0,3,17	./.	./.	0/0:9,3:12:14.89:0,15,103	0/1:5,0:5:0.88:1,0,12	0/0:3,0:2:5.88:0,6,36	0/0:11,0:5:7.40:0,7,69	0/1:10,0:10:35.88:52,0,36	0/1:8,1:9:34.39:52,0,34	0/1:6,0:5:8.95:9,0,11	1/1:11,0:11:22.14:127,22,0	0/1:9,0:10:21.71:59,0,22	1/1:2,0:2:1.44:4,1,0	1/1:2,0:2:2.74:12,3,0	./.	0/1:10,0:10:20.10:20,0,20	0/1:6,0:6:23.41:28,0,23	0/0:14,0:11:0.13:0,0,102	0/0:2,0:1:2.92:0,3,17	./.	0/1:4,2:6:4.20:39,0,4	1/1:1,3:5:10.54:64,11,0	0/1:9,0:10:2.72:3,0,44	0/0:3,0:3:4.09:0,4,16	0/1:4,0:3:2.42:2,0,31	0/1:6,0:5:1.09:1,0,70	0/1:26,0:20:30.45:48,0,30
chr10	89927612	.	T	TC	260.65	PASS	AB=0.667;AC=9;AF=0.196;AN=46;BaseQRankSum=-0.376;DP=200;FS=0.000;HRun=0;HaplotypeScore=72.1567;InbreedingCoeff=0.5653;MQ=34.89;MQ0=7;MQRankSum=-1.926;QD=10.43;ReadPosRankSum=1.242;VQSLOD=3.3799;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:28.26:0,28,319	./.	./.	./.	0/0:14,0:13:18:0,18,210	0/0:3,0:3:4.55:0,5,27	0/0:6,0:5:14.87:0,15,121	0/0:17,0:13:32.67:0,33,234	0/0:13,0:12:20.62:0,21,189	1/1:4,6:10:20.88:247,21,0	0/1:2,2:4:10.42:35,0,10	0/0:8,0:8:7.87:0,8,31	0/0:6,0:6:11.44:0,11,77	0/0:4,0:3:5.91:0,6,44	1/1:0,4:4:5.91:38,6,0	./.	1/1:1,4:5:5.81:34,6,0	0/0:9,0:8:19.81:0,20,229	0/0:15,0:12:26.52:0,27,171	0/0:1,0:1:2.99:0,3,24	./.	0/0:7,0:7:9:0,9,70	0/0:3,0:3:5.94:0,6,45	0/0:9,0:9:12.03:0,12,151	1/1:1,1:2:2.99:39,3,0	0/0:5,0:4:8.82:0,9,62	0/0:10,0:6:7.17:0,7,43	0/0:24,0:15:15.42:0,15,80
chr10	89927965	.	TTCTCTCTC	T	6778.54	PASS	AB=0.992;AC=33;AF=0.589;AN=56;BaseQRankSum=7.038;DP=520;FS=0.411;HRun=0;HaplotypeScore=188.4514;InbreedingCoeff=0.1801;MQ=45.74;MQ0=10;MQRankSum=-3.831;QD=16.82;ReadPosRankSum=-0.198;VQSLOD=3.9843;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:50.84:0,51,1025	0/0:4,0:3:8.97:0,9,93	0/0:28,0:9:20.43:0,20,209	0/0:40,0:14:10.46:0,10,196	0/1:33,0:32:99:115,0,694	1/1:13,7:20:40.85:621,41,0	1/1:5,0:5:6.50:48,6,0	1/1:26,0:23:35.12:348,35,0	0/1:19,0:19:99:110,0,372	1/1:20,3:23:49.25:747,49,0	1/1:10,5:14:31.91:612,32,0	0/1:12,0:12:75.98:158,0,76	0/1:13,0:13:23.79:24,0,401	0/1:15,0:15:99:153,0,174	0/1:20,0:19:99:128,0,120	1/1:14,2:13:26.93:394,27,0	0/1:22,0:22:9.55:10,0,338	0/1:21,0:19:44.55:45,0,413	0/1:19,2:18:26.10:294,0,26	1/1:11,5:15:23.70:422,24,0	0/1:8,0:8:3.75:4,0,13	0/1:17,0:17:57.38:57,0,271	0/0:13,0:12:8.33:0,8,337	0/0:13,0:13:14.91:0,15,290	1/1:5,4:8:18.78:407,19,0	1/1:16,5:18:36.98:696,37,0	1/1:14,11:24:56.78:1008,57,0	1/1:23,2:24:41.87:380,42,0
chr10	89927993	.	CTTTCTT	C	5790.47	PASS	AB=0.976;AC=32;AF=0.571;AN=56;BaseQRankSum=4.720;DP=469;FS=10.821;HRun=0;HaplotypeScore=175.3142;InbreedingCoeff=-0.2291;MQ=34.75;MQ0=16;MQRankSum=-3.802;QD=14.23;ReadPosRankSum=9.356;VQSLOD=1.8494;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:10:30.10:0,30,452	0/1:6,0:6:8.03:8,0,38	0/1:22,0:3:32.17:32,0,63	0/0:33,0:2:4.26:0,4,59	0/1:27,0:27:99:121,0,216	1/1:16,0:16:2.28:336,2,0	1/1:4,0:4:3.01:38,3,0	1/1:23,0:19:37.24:339,37,0	0/1:19,0:19:99:123,0,131	0/1:22,0:21:3.73:410,0,4	1/1:18,0:15:27.36:381,27,0	0/1:16,0:16:99:149,0,178	0/1:9,0:9:32.93:33,0,113	0/1:15,0:15:99:151,0,120	1/1:10,11:22:43.88:930,44,0	0/1:17,0:14:12.98:174,0,13	0/1:14,3:19:74.29:428,0,74	0/1:21,0:19:58.21:58,0,139	0/1:14,0:13:72.55:194,0,73	1/1:14,0:14:24.04:269,24,0	0/0:3,0:3:3.01:0,3,40	0/1:15,0:15:52.55:124,0,53	0/1:12,0:11:8.80:9,0,77	0/0:14,0:14:11.84:0,12,143	0/1:12,0:12:45.02:231,0,45	0/1:24,0:19:42.81:463,0,43	1/1:26,0:25:44.55:629,45,0	1/1:8,0:8:10.56:161,11,0
chr10	89927997	.	CTT	C	3453.22	PASS	AB=0.860;AC=29;AF=0.518;AN=56;BaseQRankSum=1.397;DP=477;FS=7.525;HRun=3;HaplotypeScore=155.5784;InbreedingCoeff=-0.3835;MQ=33.92;MQ0=17;MQRankSum=0.416;QD=8.30;ReadPosRankSum=5.645;VQSLOD=0.0514;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:11:31.64:0,32,236	0/0:7,0:7:5.95:0,6,48	0/1:28,1:4:29.16:29,0,95	0/0:37,1:2:4.26:0,4,39	0/1:15,11:26:99:283,0,148	0/1:14,0:14:37.43:80,0,37	1/1:5,0:5:2.97:20,3,0	1/1:19,0:17:31.07:171,31,0	0/1:11,10:21:89.61:352,0,90	0/1:26,0:25:12.26:189,0,12	1/1:17,0:13:11.90:123,12,0	0/1:7,9:16:99:212,0,173	0/1:7,2:9:99:110,0,110	0/1:6,9:15:99:216,0,132	1/1:24,0:23:21.12:364,21,0	0/1:16,0:13:37.28:59,0,37	0/1:17,0:17:99:147,0,123	0/1:14,4:16:93.04:201,0,93	0/1:11,1:10:26.32:60,0,26	0/1:14,1:14:0.32:50,0,0	0/0:3,0:3:2.97:0,3,20	0/1:7,8:15:48.74:172,0,49	0/1:9,5:13:21.79:148,0,22	0/1:13,1:14:30.39:30,0,84	0/1:13,1:12:46.14:64,0,46	0/1:25,0:20:81.42:146,0,81	1/1:27,0:26:24.39:195,24,0	0/1:7,0:7:1.09:33,0,1
chr10	89927999	.	TTCTC	T	3640.85	PASS	AB=1.000;AC=37;AF=0.712;AN=52;BaseQRankSum=1.274;DP=489;FS=0.557;HRun=0;HaplotypeScore=172.2898;InbreedingCoeff=-0.0829;MQ=33.42;MQ0=18;MQRankSum=1.061;QD=8.35;ReadPosRankSum=6.008;VQSLOD=2.6254;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:9:2.08:0,2,14	1/1:6,0:6:5.93:40,6,0	0/0:35,0:6:17.08:0,17,120	0/1:42,0:2:3.96:4,0,23	1/1:18,8:26:18.88:355,19,0	0/1:15,0:15:47.73:96,0,48	./.	1/1:19,0:17:22.87:83,23,0	1/1:21,0:21:7.46:291,7,0	0/1:27,0:26:21.96:110,0,22	1/1:17,0:13:4.62:86,5,0	1/1:16,0:16:39.04:415,39,0	1/1:9,0:9:19.67:153,20,0	1/1:15,0:15:19.29:330,19,0	1/1:23,0:23:36.65:328,37,0	0/1:16,0:13:38.78:39,0,47	1/1:17,0:17:29.80:233,30,0	1/1:20,0:18:22.27:254,22,0	0/1:12,0:10:21.50:53,0,21	0/1:15,0:14:12.85:74,0,13	./.	1/1:15,0:15:1.76:154,2,0	1/1:14,0:13:16.76:100,17,0	0/1:13,0:13:7.16:59,0,7	0/1:14,0:12:25.23:101,0,25	0/1:28,0:23:81.37:81,0,126	0/1:28,0:27:16.89:182,0,17	0/1:7,0:7:9.61:17,0,10
chr10	89928003	.	C	CTT	1339	PASS	AB=0.973;AC=14;AF=0.269;AN=52;BaseQRankSum=6.036;DP=493;FS=2.677;HRun=1;HaplotypeScore=168.8687;InbreedingCoeff=0.0265;MQ=32.83;MQ0=21;MQRankSum=-0.716;QD=5.07;ReadPosRankSum=-0.422;VQSLOD=-0.5469;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:10:17.10:0,17,73	0/0:5,0:5:3.88:0,4,27	0/1:38,0:7:4.89:5,0,198	0/1:46,0:2:1.42:1,0,41	0/0:25,0:25:8.39:0,8,299	0/1:14,0:14:18.93:115,0,19	./.	0/0:15,0:13:14.02:0,14,229	0/0:21,0:21:22.87:0,23,289	0/1:23,5:26:99:270,0,127	0/1:16,0:12:45.40:166,0,45	0/0:17,0:17:19.16:0,19,237	0/0:9,0:9:26.56:0,27,191	0/0:15,0:15:23.87:0,24,218	0/0:24,0:23:35.89:0,36,322	0/1:17,1:15:50.89:117,0,51	0/0:16,0:17:7.42:0,7,207	0/0:20,0:18:20.89:0,21,209	0/1:11,0:9:43.39:78,0,43	1/1:17,0:16:2.73:118,3,0	./.	0/0:15,0:15:6.88:0,7,120	0/0:14,0:13:13.36:0,13,144	0/0:14,0:14:14.75:0,15,98	0/1:13,1:12:97.62:128,0,98	0/1:28,0:23:99:159,0,158	1/1:30,0:29:41.61:323,42,0	0/1:4,0:4:0.66:7,0,1
chr10	89928021	.	C	CTT	4745.01	PASS	AB=0.955;AC=36;AF=0.667;AN=54;BaseQRankSum=4.466;DP=484;FS=0.502;HRun=3;HaplotypeScore=145.5762;InbreedingCoeff=-0.0354;MQ=33.23;MQ0=22;MQRankSum=-3.203;QD=12.59;ReadPosRankSum=-4.128;VQSLOD=0.2229;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:3,0:4:0.42:25,0,0	1/1:1,0:6:5.99:53,6,0	0/0:39,0:7:19.28:0,19,237	0/0:48,0:2:5.93:0,6,63	0/1:22,0:22:63.68:64,0,316	1/1:12,0:11:0.44:236,0,0	./.	1/1:11,0:11:6.18:222,6,0	0/1:23,0:23:99:107,0,157	1/1:25,1:22:50.70:541,51,0	1/1:13,0:8:20.94:187,21,0	0/1:16,0:16:78.17:78,0,256	0/1:7,0:7:15.68:16,0,167	0/1:14,0:14:84.79:85,0,141	0/1:12,0:17:18.04:143,0,18	1/1:15,0:11:21.04:241,21,0	0/1:15,1:16:67.25:67,0,210	0/1:18,0:18:38.67:39,0,214	0/1:9,2:8:3.22:68,0,3	1/1:20,3:22:40.57:388,41,0	1/1:3,0:3:6.02:90,6,0	0/1:18,3:21:53:212,0,53	0/1:14,0:13:8.69:9,0,39	0/0:12,0:13:11.94:0,12,93	1/1:18,1:16:32.83:366,33,0	1/1:23,3:21:57.08:678,57,0	1/1:31,3:32:63.02:723,63,0	1/1:3,1:4:9.02:108,9,0
chr10	89928022	.	TCC	T	8077.43	PASS	AB=0.706;AC=41;AF=0.732;AN=56;BaseQRankSum=3.072;DP=478;FS=6.176;HRun=2;HaplotypeScore=128.6059;InbreedingCoeff=0.0607;MQ=33.38;MQ0=22;MQRankSum=-3.274;QD=21.03;ReadPosRankSum=-4.885;VQSLOD=1.0454;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:11.40:82,11,0	1/1:5,1:6:5.98:69,6,0	0/0:39,0:7:19.60:0,20,294	0/0:48,0:2:6.01:0,6,79	0/1:11,11:22:99:201,0,118	1/1:1,11:11:18.76:370,19,0	0/0:2,5:6:0:0,0,0	1/1:1,10:11:25.56:449,26,0	0/1:10,12:22:35.21:509,0,35	1/1:1,25:22:54.12:752,54,0	1/1:1,12:8:21.04:296,21,0	0/1:7,9:16:91.46:211,0,91	0/1:6,2:8:62.92:63,0,71	0/1:4,10:14:44.27:219,0,44	1/1:9,7:16:17.54:294,18,0	1/1:0,15:11:21.07:335,21,0	0/1:11,4:15:63.76:109,0,64	0/1:14,4:18:71.77:188,0,72	1/1:8,4:9:14.36:169,14,0	1/1:3,19:21:45.08:591,45,0	1/1:0,3:3:6.02:95,6,0	0/1:6,13:19:0.41:295,0,0	1/1:8,6:13:5.28:261,5,0	0/1:10,3:13:27.05:27,0,38	1/1:1,16:15:38.62:585,39,0	1/1:3,23:21:57.17:854,57,0	1/1:6,29:32:63.18:921,63,0	1/1:1,3:4:9.03:132,9,0
chr10	89928277	.	TTTATTG	T	2595.94	PASS	AB=0.922;AC=10;AF=0.179;AN=56;BaseQRankSum=-3.561;DP=611;FS=7.762;HRun=0;HaplotypeScore=142.4614;InbreedingCoeff=0.2749;MQ=69.36;MQ0=0;MQRankSum=-5.985;QD=13.74;ReadPosRankSum=-3.134;VQSLOD=1.6632;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,4709	1/1:0,7:7:18.06:431,18,0	0/0:24,0:22:55.71:0,56,1505	0/0:24,0:23:66.08:0,66,1690	0/0:27,0:26:78.25:0,78,2461	0/0:16,0:15:48.16:0,48,1188	0/1:26,0:26:47.69:48,0,1437	0/1:27,0:26:99:167,0,1093	0/0:16,0:16:45.11:0,45,1321	0/0:24,0:23:13.23:0,13,1450	0/0:19,0:18:25.42:0,25,1166	0/0:20,0:20:59.95:0,60,1799	0/0:14,0:14:42.14:0,42,1466	0/0:19,0:19:57.17:0,57,1866	1/1:1,22:23:48.16:1148,48,0	0/0:14,0:14:42.14:0,42,1082	0/1:3,22:25:99:767,0,162	0/0:29,0:29:84.23:0,84,2690	0/1:20,0:20:99:102,0,701	0/0:18,0:18:48.64:0,49,1208	0/1:30,0:30:81.97:82,0,1489	0/0:19,0:19:51.16:0,51,1711	0/0:17,0:17:45.14:0,45,1455	0/0:28,0:28:81.23:0,81,2609	0/0:17,0:16:22.05:0,22,817	0/1:31,0:31:5.70:6,0,1550	0/0:24,0:24:28.21:0,28,1452	0/0:5,0:5:15.05:0,15,384
chr10	89929831	.	AT	A	175.27	PASS	AB=0.875;AC=8;AF=0.160;AN=50;BaseQRankSum=0.818;DP=210;FS=6.654;HRun=4;HaplotypeScore=65.4770;InbreedingCoeff=0.4431;MQ=71.56;MQ0=12;MQRankSum=-2.652;QD=7.97;ReadPosRankSum=-0.900;VQSLOD=-0.1788;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:39.06:0,39,479	1/1:2,1:1:3.01:36,3,0	0/0:23,1:10:24.47:0,24,181	0/0:37,0:17:0.13:0,0,140	0/0:9,0:9:14.70:0,15,89	0/0:6,0:6:17.08:0,17,88	0/0:3,0:3:5.91:0,6,37	0/0:16,0:14:37.74:0,38,156	0/0:2,0:2:5.82:0,6,32	0/0:3,0:4:8.77:0,9,50	0/0:2,0:2:5.90:0,6,36	./.	0/1:2,0:3:11.60:14,0,12	0/0:3,0:3:8.54:0,9,46	1/1:0,3:3:8.99:91,9,0	0/0:4,0:4:11.72:0,12,70	1/1:2,4:5:14.41:151,14,0	0/0:5,0:5:11.45:0,11,60	0/0:13,0:9:24.01:0,24,123	0/0:2,0:2:5.70:0,6,28	0/0:8,0:8:13.82:0,14,61	./.	0/0:3,0:3:8.71:0,9,49	./.	0/0:9,0:9:25.66:0,26,141	0/0:11,0:10:26.69:0,27,107	0/1:7,0:7:14.27:14,0,65	0/0:10,0:10:25.35:0,25,119
chr10	89929851	.	CA	C	837.32	PASS	AB=0.951;AC=29;AF=0.580;AN=50;BaseQRankSum=6.650;DP=276;FS=17.748;HRun=10;HaplotypeScore=82.1453;InbreedingCoeff=0.6830;MQ=71.63;MQ0=15;MQRankSum=-7.480;QD=5.81;ReadPosRankSum=0.689;VQSLOD=0.4273;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,9:14:26.99:234,27,0	1/1:1,0:2:2.03:6,2,0	0/0:40,0:13:0.56:0,1,34	0/1:54,2:26:3.99:4,0,34	1/1:1,0:9:16.30:48,16,0	0/0:6,0:7:20.92:0,21,214	0/0:4,0:4:12.03:0,12,132	0/0:21,0:19:52.91:0,53,554	1/1:2,0:6:10.28:28,10,0	1/1:2,3:4:12:104,12,0	1/1:1,2:3:6:52,6,0	./.	1/1:1,0:3:4.01:12,4,0	1/1:0,0:3:6.11:18,6,0	1/1:0,0:4:8.15:24,8,0	1/1:0,4:4:12:104,12,0	1/1:4,1:7:0.54:33,1,0	1/1:6,0:7:7.36:21,7,0	0/0:9,1:10:0.99:0,1,227	0/0:6,0:6:15.04:0,15,166	0/0:10,0:9:18.05:0,18,197	./.	1/1:1,0:4:6.11:18,6,0	./.	1/1:1,11:12:35.99:312,36,0	0/0:15,0:15:42.11:0,42,464	0/0:6,0:6:18.05:0,18,199	0/0:13,0:13:30.08:0,30,332
chr10	89929868	.	CA	C	3849.80	PASS	AB=0.598;AC=43;AF=0.827;AN=52;BaseQRankSum=-2.871;DP=282;FS=28.471;HRun=10;HaplotypeScore=69.8395;InbreedingCoeff=0.2597;MQ=71.45;MQ0=10;MQRankSum=-0.885;QD=18.33;ReadPosRankSum=5.317;VQSLOD=2.5350;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,12:16:32.98:286,33,0	1/1:0,1:1:3:26,3,0	0/0:30,0:11:7.25:0,7,63	0/0:42,0:20:20.73:0,21,171	1/1:1,9:10:23.98:208,24,0	1/1:0,7:7:20.99:181,21,0	0/1:1,4:5:4.78:89,0,5	0/1:12,23:33:11.69:494,0,12	1/1:0,7:7:18:156,18,0	1/1:1,7:7:21:182,21,0	1/1:2,2:4:9:78,9,0	1/1:1,0:1:3:26,3,0	1/1:0,2:2:6:52,6,0	1/1:1,4:5:8.99:78,9,0	1/1:2,4:6:15:130,15,0	0/1:2,3:5:7.76:66,0,8	0/1:3,7:10:4.76:89,0,5	0/1:3,5:6:8.09:89,0,8	1/1:2,10:12:26.99:234,27,0	1/1:0,6:6:14.99:130,15,0	1/1:3,8:10:18:156,18,0	./.	1/1:0,3:3:9:78,9,0	./.	1/1:2,11:13:29.87:260,30,0	1/1:2,15:17:44.99:390,45,0	1/1:1,6:7:14.99:130,15,0	1/1:0,10:11:29.03:240,29,0
chr10	89931234	.	C	CT	3907.19	PASS	AB=0.823;AC=26;AF=0.464;AN=56;BaseQRankSum=10.937;DP=563;FS=16.935;HRun=12;HaplotypeScore=100.6315;InbreedingCoeff=0.5541;MQ=62.39;MQ0=6;MQRankSum=-6.637;QD=13.07;ReadPosRankSum=-0.846;VQSLOD=1.8950;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:74.44:0,74,544	0/0:7,0:7:17.44:0,17,131	0/0:22,0:13:7.19:0,7,34	0/1:27,0:17:5.79:6,0,26	1/1:19,6:26:15.05:305,15,0	0/0:15,0:15:38.76:0,39,284	0/0:15,0:15:23.77:0,24,173	0/0:35,1:36:38.83:0,39,439	1/1:8,8:16:35.87:325,36,0	1/1:11,11:24:38.27:399,38,0	1/1:12,15:29:69.75:606,70,0	1/1:4,7:11:23.87:218,24,0	1/1:6,5:11:21.03:203,21,0	1/1:5,7:12:30.03:285,30,0	0/0:11,0:11:20.82:0,21,153	0/1:5,5:11:0.57:139,0,1	0/0:33,0:35:71.42:0,71,511	1/1:9,9:18:4.76:290,5,0	0/0:26,1:28:3.34:0,3,283	0/1:20,3:24:61.41:61,0,217	0/0:14,3:17:6.86:0,7,196	1/1:9,14:24:31.64:430,32,0	0/1:12,7:20:9.27:188,0,9	0/1:8,3:11:19.79:145,0,20	1/1:6,8:13:31.86:292,32,0	0/1:14,2:18:12.94:13,0,211	0/0:28,0:29:65.51:0,66,467	0/0:15,1:16:9.59:0,10,233
chr10	89931264	.	TG	T	6820.17	PASS	AB=0.660;AC=25;AF=0.446;AN=56;BaseQRankSum=14.640;DP=546;FS=15.866;HRun=1;HaplotypeScore=82.3532;InbreedingCoeff=0.7655;MQ=55.12;MQ0=19;MQRankSum=-5.254;QD=32.63;ReadPosRankSum=1.444;VQSLOD=3.2634;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.26:0,87,1338	0/0:5,0:5:15.05:0,15,240	0/0:37,0:14:38.66:0,39,586	0/0:42,0:13:27.08:0,27,393	1/1:0,18:18:51.17:712,51,0	0/0:13,0:13:39.13:0,39,618	0/0:13,0:13:39.13:0,39,623	0/0:25,0:22:63.19:0,63,937	1/1:1,15:15:39.13:541,39,0	1/1:0,22:22:66.22:919,66,0	1/1:0,21:21:51.17:711,51,0	1/1:0,9:8:24.08:332,24,0	1/1:0,8:8:24.08:333,24,0	1/1:0,7:7:18.06:243,18,0	0/0:16,0:16:48.16:0,48,767	1/1:0,13:13:39.13:545,39,0	0/0:37,0:37:99:0,105,1640	1/1:1,16:17:0.37:581,0,0	0/0:35,0:35:99:0,105,1605	0/0:25,0:25:75.24:0,75,1158	0/0:24,0:24:69.24:0,69,1097	1/1:1,15:18:48.14:636,48,0	1/1:0,14:14:35.60:480,36,0	0/1:2,9:11:12.38:346,0,12	0/1:2,10:11:4.99:386,0,5	0/1:20,3:23:56.15:56,0,890	0/0:25,0:25:75.24:0,75,1168	0/0:11,0:11:33.11:0,33,527
chr10	89932543	.	C	CA	2640.67	PASS	AB=0.825;AC=33;AF=0.589;AN=56;BaseQRankSum=-0.460;DP=499;FS=1.589;HRun=13;HaplotypeScore=66.0057;InbreedingCoeff=0.4820;MQ=60.06;MQ0=3;MQRankSum=-2.624;QD=7.65;ReadPosRankSum=-0.913;VQSLOD=2.3956;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:36:52.37:0,52,349	0/1:5,5:12:23.36:72,0,23	0/1:5,0:6:1.69:15,0,2	0/0:7,0:7:10.54:0,11,59	1/1:11,15:26:30.24:244,30,0	0/1:18,1:21:32.27:32,0,171	0/0:17,0:19:20.84:0,21,231	0/0:16,0:17:10.04:0,10,101	1/1:7,14:22:9.19:200,9,0	1/1:1,1:11:28.57:156,29,0	1/1:7,1:17:22.89:128,23,0	1/1:4,18:23:30.26:249,30,0	1/1:7,2:9:15.01:136,15,0	1/1:3,6:10:2.17:50,2,0	1/1:7,18:25:24.46:367,24,0	1/1:8,1:21:37.72:224,38,0	1/1:5,19:26:35.72:308,36,0	1/1:6,16:22:24.03:223,24,0	0/1:14,2:16:26.86:27,0,121	0/1:15,1:16:5.23:5,0,117	0/0:17,1:18:4.06:0,4,175	0/1:6,5:11:10.14:47,0,10	0/1:7,9:17:1.69:119,0,2	1/1:5,15:20:14.16:161,14,0	1/1:3,1:11:15.09:74,15,0	0/0:23,0:23:32.56:0,33,223	0/0:19,1:20:19.76:0,20,132	0/0:11,0:11:13.62:0,14,87
chr10	89932959	.	TTTTTTC	T	755.40	PASS	AB=0.996;AC=23;AF=0.411;AN=56;BaseQRankSum=4.253;DP=326;FS=19.547;HRun=0;HaplotypeScore=69.3728;InbreedingCoeff=-0.2673;MQ=39.99;MQ0=36;MQRankSum=-2.058;QD=4.34;ReadPosRankSum=4.875;VQSLOD=-0.1282;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:32:74.73:0,75,869	0/0:4,0:4:11.97:0,12,140	1/1:17,0:1:1.82:5,2,0	0/0:37,0:12:13.16:0,13,174	0/1:7,0:7:23.85:24,0,34	0/1:13,0:11:51.14:79,0,51	0/1:15,0:14:80.19:110,0,80	0/0:19,0:16:43.89:0,44,359	0/1:9,0:8:29.01:29,0,36	1/1:5,0:4:4.87:47,5,0	0/1:4,0:4:7.61:11,0,8	0/1:11,0:11:6.36:61,0,6	0/1:4,0:3:37.16:37,0,39	0/1:7,0:6:4.25:4,0,36	0/0:15,0:12:35.36:0,35,473	0/1:5,0:5:5.72:64,0,6	0/0:26,0:22:10.93:0,11,672	0/1:14,1:14:99:208,0,106	0/1:9,0:9:16.57:17,0,126	0/1:2,0:2:15.68:16,0,25	0/0:6,0:4:0.89:0,1,2	0/1:5,0:5:9.38:9,0,15	0/0:3,5:6:0.71:0,1,2	0/1:18,0:16:37.16:46,0,37	1/1:4,0:4:7.33:64,7,0	0/1:15,0:12:55.42:55,0,142	0/1:5,0:5:7.72:8,0,62	0/1:4,0:2:13.91:14,0,20
chr10	89933054	.	TTTGACACAGGA	T	1440.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.210;DP=290;FS=2.341;HRun=0;HaplotypeScore=90.4106;InbreedingCoeff=0.8067;MQ=63.15;MQ0=0;MQRankSum=-6.153;QD=90.00;ReadPosRankSum=0.439;VQSLOD=3.1981;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:45.15:1535,45,0	0/0:4,0:4:12.04:0,12,700	0/0:10,0:8:23.57:0,24,1019	0/0:9,0:5:15.05:0,15,646	0/0:8,0:8:24.04:0,24,1176	0/0:10,0:10:30.10:0,30,1746	0/0:15,0:15:42.14:0,42,2387	0/0:20,0:19:57.20:0,57,2765	0/0:9,0:9:27.09:0,27,1484	0/0:10,0:10:30.10:0,30,1639	0/0:6,0:6:18.06:0,18,1048	0/0:8,0:8:24.08:0,24,1140	0/0:4,0:4:12.04:0,12,598	0/0:6,0:6:18.06:0,18,1049	0/0:8,0:8:24.05:0,24,1221	0/0:8,0:8:24.08:0,24,1362	0/0:23,0:23:66.23:0,66,3663	0/0:14,0:14:42.13:0,42,2134	0/0:10,0:10:27.09:0,27,1260	0/0:9,0:9:27.09:0,27,1497	0/0:22,0:22:63.22:0,63,3635	0/0:3,0:3:9.03:0,9,501	0/0:4,0:4:8.69:0,9,524	0/0:16,0:16:45.15:0,45,2514	0/0:10,0:10:30.10:0,30,1623	0/0:8,0:8:21.07:0,21,1041	0/0:12,0:12:36.12:0,36,1893	0/0:7,0:7:21.07:0,21,1224
chr10	89933223	.	CGA	C	2008.28	PASS	AB=0.883;AC=46;AF=0.885;AN=52;BaseQRankSum=1.746;DP=347;FS=0.000;HRun=0;HaplotypeScore=68.2411;InbreedingCoeff=0.3965;MQ=62.07;MQ0=39;MQRankSum=-1.252;QD=7.61;ReadPosRankSum=2.004;VQSLOD=2.9087;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,1:18:9.37:9,0,329	./.	0/0:36,0:11:8.81:0,9,62	0/0:44,0:16:12.01:0,12,124	0/1:7,2:3:0:0,0,0	1/1:12,0:12:11.99:103,12,0	1/1:5,2:6:11.21:92,11,0	1/1:8,7:14:15.03:169,15,0	1/1:4,4:6:3.01:36,3,0	1/1:20,0:14:12.56:88,13,0	1/1:9,0:8:9.02:91,9,0	1/1:1,4:5:9.03:108,9,0	1/1:4,5:5:6.02:72,6,0	1/1:1,5:4:6.02:72,6,0	1/1:4,0:4:8.64:54,9,0	1/1:6,0:6:5.84:40,6,0	1/1:15,0:9:17.67:127,18,0	1/1:7,12:16:10.88:238,11,0	1/1:24,0:24:18.04:205,18,0	1/1:15,0:13:8.69:74,9,0	1/1:1,5:4:6.02:72,6,0	1/1:0,4:2:2.74:12,3,0	1/1:1,4:1:3.01:36,3,0	./.	1/1:6,0:6:5.68:28,6,0	1/1:18,0:17:23.73:252,24,0	1/1:16,0:16:5.33:49,5,0	1/1:1,4:4:9.03:108,9,0
chr10	89933236	.	GAGAGAGAGGAAGGAAGGA	G	1806.26	PASS	AB=1.000;AC=17;AF=0.315;AN=54;BaseQRankSum=2.522;DP=345;FS=0.826;HRun=0;HaplotypeScore=127.9037;InbreedingCoeff=0.3555;MQ=58.91;MQ0=39;MQRankSum=-2.050;QD=13.18;ReadPosRankSum=3.080;VQSLOD=1.6870;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:32.94:0,33,802	./.	0/0:31,0:9:8.26:0,8,64	0/0:38,0:12:14.96:0,15,213	0/0:9,0:3:3.01:0,3,88	0/0:14,0:14:18.02:0,18,196	0/1:9,0:8:51.56:52,0,80	0/0:16,0:15:20.04:0,20,156	0/0:11,0:9:18.04:0,18,709	1/1:6,14:14:13.06:414,13,0	1/1:6,0:5:9.03:189,9,0	0/0:5,0:5:8.05:0,8,408	0/0:11,0:7:12.04:0,12,514	0/0:9,0:7:11.57:0,12,574	1/1:5,0:4:9.03:160,9,0	1/1:0,0:5:6.02:90,6,0	0/1:16,0:9:19.12:341,0,19	0/0:16,0:13:29.22:0,29,578	0/1:23,0:22:99:144,0,361	0/1:14,0:12:34.86:50,0,35	0/0:7,0:5:5.62:0,6,34	0/0:7,0:4:8.06:0,8,342	0/0:6,0:2:6.02:0,6,397	0/0:5,0:4:6.02:0,6,346	1/1:0,6:6:6.02:311,6,0	0/1:17,0:16:99:110,0,207	1/1:16,0:16:4.33:116,4,0	0/0:4,0:3:5.13:0,5,20
chr10	89933238	.	GA	G	235.90	PASS	AB=0.667;AC=11;AF=0.204;AN=54;BaseQRankSum=2.654;DP=343;FS=0.000;HRun=1;HaplotypeScore=69.7646;InbreedingCoeff=0.5240;MQ=59.10;MQ0=40;MQRankSum=-0.923;QD=4.21;ReadPosRankSum=1.948;VQSLOD=0.3861;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:31.32:0,31,463	./.	0/0:30,0:9:11.71:0,12,87	0/0:37,0:11:14.98:0,15,189	0/0:10,0:4:2.99:0,3,25	0/0:14,0:14:17.16:0,17,109	0/0:10,0:8:12.51:0,13,112	0/0:16,0:15:31.90:0,32,327	0/0:11,0:9:16.28:0,16,177	1/1:14,1:14:14.17:101,14,0	1/1:1,4:4:8.97:73,9,0	0/0:5,0:5:4.62:0,5,11	0/0:11,0:7:7.74:0,8,80	0/0:9,0:7:11.52:0,12,119	1/1:2,3:4:3.20:31,3,0	1/1:5,0:5:5.48:31,5,0	0/1:5,8:9:26.80:127,0,27	0/0:17,0:14:4.76:0,5,86	0/0:20,0:19:42.11:0,42,394	0/0:14,0:12:7:0,7,53	0/0:7,0:5:3.28:0,3,7	0/0:7,0:4:3.48:0,3,39	0/0:6,0:2:4.26:0,4,41	0/0:6,0:5:9.03:0,9,112	1/1:6,0:6:4.99:18,5,0	0/0:18,0:17:22.77:0,23,173	0/0:16,0:16:5.46:0,5,28	0/0:4,0:3:3.74:0,4,9
chr10	89933240	.	GAGAGGAAGGAAGGA	G	3221.60	PASS	AB=1.000;AC=34;AF=0.630;AN=54;BaseQRankSum=4.164;DP=334;FS=6.560;HRun=0;HaplotypeScore=99.9321;InbreedingCoeff=0.5057;MQ=56.25;MQ0=40;MQRankSum=-3.813;QD=14.64;ReadPosRankSum=4.300;VQSLOD=1.0550;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:8.93:9,0,329	./.	0/0:28,0:8:8.75:0,9,58	0/0:35,0:9:12.02:0,12,124	0/0:9,0:3:6.02:0,6,239	1/1:2,0:15:12.02:118,12,0	1/1:10,0:8:14.22:190,14,0	1/1:15,0:14:15.03:169,15,0	0/0:11,0:9:18.06:0,18,873	1/1:20,0:14:11.28:182,11,0	1/1:5,0:4:9.02:91,9,0	0/1:5,0:5:25.37:25,0,269	0/0:11,0:7:11.61:0,12,336	0/1:9,0:7:56.48:56,0,471	1/1:5,0:4:8.81:136,9,0	1/1:5,0:5:6.02:152,6,0	1/1:16,0:9:19.61:194,20,0	0/1:16,0:13:99:186,0,448	1/1:6,10:15:24.08:526,24,0	1/1:5,10:13:8.70:211,9,0	1/1:7,0:5:6.02:72,6,0	0/0:7,0:4:8.06:0,8,285	0/0:6,0:2:6.02:0,6,279	0/0:6,0:5:9.03:0,9,453	1/1:6,0:6:6.02:209,6,0	1/1:3,14:16:29.76:503,30,0	1/1:0,16:16:4.59:251,5,0	1/1:5,0:4:9.03:129,9,0
chr10	89933244	.	GGAAGGAAGGA	G	1352.58	PASS	AB=0.978;AC=17;AF=0.315;AN=54;BaseQRankSum=4.127;DP=314;FS=4.568;HRun=0;HaplotypeScore=85.0238;InbreedingCoeff=0.1631;MQ=54.91;MQ0=40;MQRankSum=-3.919;QD=9.02;ReadPosRankSum=2.317;VQSLOD=1.3996;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:16:10.76:0,11,189	./.	0/0:25,0:7:7.44:0,7,49	0/0:32,0:9:1.98:0,2,78	0/0:9,0:3:6.02:0,6,239	1/1:14,0:14:12.03:245,12,0	0/1:6,2:6:28.38:88,0,28	0/1:15,0:13:3.35:4,0,3	0/0:9,0:7:18.06:0,18,844	0/1:20,0:14:14.44:70,0,14	0/0:4,2:5:5.56:0,6,17	0/0:5,0:5:6.22:0,6,263	0/0:10,0:6:11.99:0,12,361	0/0:9,0:7:11.87:0,12,480	0/1:5,0:4:3.87:41,0,4	1/1:5,0:5:5.88:55,6,0	0/1:15,0:8:32.16:46,0,32	0/0:15,0:12:28.51:0,29,565	0/1:11,0:10:8.31:278,0,8	0/1:13,0:11:7.51:119,0,8	0/0:7,0:5:4.93:0,5,16	0/0:7,0:4:8.06:0,8,263	0/0:7,0:3:6.02:0,6,267	0/0:6,0:5:9.03:0,9,440	1/1:6,0:6:6.02:153,6,0	0/1:17,0:16:23.75:222,0,24	1/1:16,0:16:5.19:176,5,0	0/1:5,0:4:4.37:13,0,4
chr10	89933293	.	GAAGGAAGA	G	721.09	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=7.293;DP=306;FS=0.000;HRun=0;HaplotypeScore=85.6157;InbreedingCoeff=0.1009;MQ=57.01;MQ0=8;MQRankSum=-6.679;QD=5.96;ReadPosRankSum=2.158;VQSLOD=1.5639;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:53.71:0,54,413	1/1:1,0:1:2.97:20,3,0	0/0:12,0:10:24.40:0,24,218	0/0:12,0:10:30.06:0,30,318	0/0:12,0:12:36:0,36,548	0/1:16,0:16:99:146,0,117	0/1:11,0:10:17.21:17,0,162	0/0:23,0:22:63.03:0,63,584	0/0:14,0:12:33.04:0,33,804	0/1:11,0:11:19.44:19,0,91	0/0:7,0:7:17.91:0,18,187	0/0:7,0:7:20.99:0,21,321	0/0:6,0:5:9.02:0,9,276	0/0:8,0:8:21.04:0,21,504	1/1:0,2:2:5.97:96,6,0	0/1:8,0:8:41.81:42,0,91	1/1:8,2:10:16.91:296,17,0	0/0:12,0:12:32.75:0,33,580	0/1:18,0:15:87.48:87,0,201	0/1:11,0:10:21.88:22,0,80	0/0:10,0:10:29.80:0,30,226	0/0:7,0:6:18.01:0,18,296	0/0:7,0:7:20.91:0,21,272	0/0:12,0:12:35.85:0,36,572	0/1:7,0:7:37.96:64,0,38	0/1:13,0:13:25.88:26,0,155	0/1:13,0:13:49.95:50,0,91	0/0:17,0:15:41.70:0,42,317
chr10	89933350	.	T	TCGGTCCTCAGCTCCCGGGGAGCGGG	2975.73	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-0.123;DP=411;FS=4.678;HRun=0;HaplotypeScore=256.8006;InbreedingCoeff=0.8596;MQ=88.71;MQ0=0;MQRankSum=-5.320;QD=198.38;ReadPosRankSum=1.413;VQSLOD=3.3353;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,6433	1/1:1,0:1:3.01:78,3,0	0/0:22,0:21:57.19:0,57,2772	0/0:31,0:31:87.21:0,87,3489	0/0:15,0:15:39.12:0,39,2465	0/0:12,0:12:36.12:0,36,2210	0/0:14,0:14:33.10:0,33,1567	0/0:29,0:29:78.27:0,78,3624	0/0:14,0:14:36.12:0,36,2307	0/0:9,0:9:21.07:0,21,1228	0/0:7,0:7:21.03:0,21,1089	0/0:12,0:12:36.12:0,36,1980	0/0:13,0:13:39.13:0,39,2138	0/0:17,0:17:51.18:0,51,2753	1/1:1,1:2:6.02:706,6,0	0/0:11,0:11:33.11:0,33,1987	1/1:5,4:12:24.08:2314,24,0	0/0:12,0:12:30.10:0,30,1773	0/0:27,0:27:75.26:0,75,3710	0/0:6,0:6:15.05:0,15,986	0/0:26,0:26:69.24:0,69,4014	0/0:7,0:7:21.06:0,21,1066	0/0:4,0:4:8.99:0,9,347	0/0:15,0:15:42.14:0,42,2240	0/0:8,0:8:24.04:0,24,1278	0/0:17,0:17:48.16:0,48,2422	0/0:10,0:10:27.09:0,27,1505	0/0:19,0:19:57.20:0,57,3380
chr10	89933631	.	CT	C	866.82	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.203;DP=402;FS=8.467;HRun=7;HaplotypeScore=39.6377;InbreedingCoeff=0.9144;MQ=70.27;MQ0=0;MQRankSum=0.569;QD=20.64;ReadPosRankSum=1.679;VQSLOD=2.3471;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.24:0,87,1074	1/1:1,1:2:3.01:31,3,0	0/0:16,0:16:33.06:0,33,390	0/0:11,0:10:20.96:0,21,238	0/0:17,0:17:39.12:0,39,490	0/0:14,0:14:39.12:0,39,490	0/0:17,0:17:48.15:0,48,603	0/0:17,0:17:42.13:0,42,527	0/0:13,0:13:39.11:0,39,478	0/0:14,0:14:39.12:0,39,488	0/0:10,0:10:30.10:0,30,377	0/0:11,0:11:33.11:0,33,415	0/0:8,0:8:24.08:0,24,302	0/0:10,0:10:30.10:0,30,377	1/1:0,12:12:27.06:275,27,0	0/0:12,0:12:36.12:0,36,453	1/1:3,25:28:69.12:693,69,0	0/0:18,0:18:51.14:0,51,626	0/0:11,0:11:30.10:0,30,377	0/0:18,0:18:45.02:0,45,512	0/0:22,0:22:63.19:0,63,778	0/0:10,0:10:27.07:0,27,326	0/0:4,0:4:12.04:0,12,151	0/0:16,0:16:45.14:0,45,566	0/0:7,0:7:15.05:0,15,186	0/0:15,0:15:39.12:0,39,490	0/0:15,0:15:42.13:0,42,528	0/0:21,0:21:57.15:0,57,695
chr10	89935707	.	AAG	A	1924.40	PASS	AB=0.949;AC=29;AF=0.518;AN=56;BaseQRankSum=3.348;DP=536;FS=25.595;HRun=0;HaplotypeScore=68.4318;InbreedingCoeff=0.2778;MQ=59.79;MQ0=36;MQRankSum=-2.913;QD=5.15;ReadPosRankSum=-0.390;VQSLOD=1.0470;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:26:34.70:0,35,279	1/1:3,0:3:2.92:8,3,0	0/1:32,0:15:15.98:16,0,68	0/0:24,0:9:11.20:0,11,104	0/1:17,0:13:23.29:23,0,125	1/1:2,13:14:12.03:133,12,0	1/1:1,17:18:15.04:169,15,0	1/1:27,8:34:45.33:472,45,0	0/0:9,0:9:22.51:0,23,208	0/1:24,0:24:64.33:64,0,157	0/1:13,0:12:11.45:11,0,128	0/1:9,0:9:18.41:18,0,60	0/0:12,0:11:25.46:0,25,252	0/1:19,0:16:49.93:50,0,105	1/1:16,0:14:2.36:45,2,0	0/0:15,0:14:7.18:0,7,128	1/1:22,0:18:3.46:26,3,0	0/1:20,0:17:3.83:4,0,143	0/1:26,0:24:19.46:175,0,19	1/1:5,20:23:25.86:184,26,0	1/1:1,10:10:8.95:73,9,0	0/0:14,0:14:32.95:0,33,293	0/0:12,0:12:10.52:0,11,112	0/0:26,0:23:45.84:0,46,368	0/0:21,0:19:26.66:0,27,241	1/1:25,6:28:59.76:314,60,0	1/1:6,13:16:20.36:165,20,0	0/1:3,16:19:29.08:164,0,29
chr10	89935709	.	G	GA	2079.82	PASS	AB=0.994;AC=24;AF=0.429;AN=56;BaseQRankSum=2.611;DP=534;FS=14.855;HRun=18;HaplotypeScore=64.1462;InbreedingCoeff=0.4008;MQ=61.18;MQ0=34;MQRankSum=-3.910;QD=6.38;ReadPosRankSum=0.069;VQSLOD=1.1597;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:26:47.90:0,48,391	1/1:3,0:3:5.42:26,5,0	0/1:32,0:15:19.11:19,0,108	0/0:25,0:10:5.38:0,5,83	0/0:16,0:13:15.34:0,15,142	1/1:14,0:13:11.93:91,12,0	0/1:18,0:18:12.88:58,0,13	1/1:27,6:32:48:587,48,0	0/0:10,0:10:20.94:0,21,172	0/1:25,0:25:10.97:11,0,131	0/0:13,0:13:19.59:0,20,159	0/0:9,0:9:8.64:0,9,73	0/0:13,0:12:26.84:0,27,220	0/1:18,0:15:6.50:7,0,82	1/1:16,0:14:0.47:1,0,0	0/0:13,0:12:13.50:0,14,118	0/1:21,0:17:3.49:17,0,3	0/0:20,0:17:14.62:0,15,121	0/1:25,0:23:0.89:341,0,1	1/1:25,1:25:26.60:223,27,0	1/1:11,0:10:3:27,3,0	0/0:13,0:13:32.06:0,32,265	0/1:12,0:12:4.53:5,0,102	0/0:25,0:22:41.74:0,42,340	0/0:22,0:20:11.40:0,11,151	1/1:32,0:29:58.17:556,58,0	1/1:20,1:18:20.59:172,21,0	0/1:18,1:19:25.08:123,0,25
chr10	89936258	.	C	CTCTG	8367.21	PASS	AB=0.629;AC=16;AF=0.286;AN=56;BaseQRankSum=-12.641;DP=688;FS=9.803;HRun=0;HaplotypeScore=114.1941;InbreedingCoeff=0.7541;MQ=80.18;MQ0=1;MQRankSum=-1.031;QD=38.56;ReadPosRankSum=-1.326;VQSLOD=4.3083;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,108,1684	0/0:7,0:7:18.06:0,18,296	0/0:41,0:37:29.89:0,30,481	0/0:39,0:34:32.74:0,33,518	0/0:19,0:19:39.12:0,39,617	0/1:11,12:23:16.21:679,0,16	1/1:3,14:18:39.05:953,39,0	1/1:24,12:37:51.17:1199,51,0	0/0:27,0:27:54.18:0,54,874	0/0:29,0:29:54.18:0,54,866	0/0:20,0:20:54.14:0,54,852	0/0:22,0:22:57.19:0,57,934	0/0:19,0:19:39.13:0,39,641	0/0:20,0:20:45.15:0,45,739	0/0:28,0:29:69.22:0,69,1089	0/0:22,0:22:45.15:0,45,740	0/0:37,0:37:81.27:0,81,1297	0/0:11,0:11:17.87:0,18,233	1/1:8,10:18:33.11:745,33,0	1/1:8,17:25:45.15:1100,45,0	0/1:14,26:42:23.38:1611,0,23	0/0:22,0:22:42.12:0,42,642	0/0:15,0:15:30.10:0,30,493	0/0:30,0:30:75.22:0,75,1182	0/0:15,0:15:36.11:0,36,566	1/1:8,14:24:1.81:998,2,0	1/1:9,16:26:42.14:1009,42,0	1/1:3,1:4:3.01:73,3,0
chr10	89936518	.	ATACT	A	2048.92	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=17.696;DP=729;FS=3.394;HRun=0;HaplotypeScore=139.3196;InbreedingCoeff=-0.1431;MQ=57.85;MQ0=2;MQRankSum=-1.237;QD=5.38;ReadPosRankSum=3.993;VQSLOD=2.5501;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,40:41:27.02:471,27,0	0/0:10,0:10:30.03:0,30,636	0/0:21,0:15:45.05:0,45,539	0/0:17,0:11:26.08:0,26,267	0/0:33,0:33:96.10:0,96,1750	0/1:19,0:19:99:152,0,100	0/1:27,0:27:99:116,0,292	0/0:15,0:15:24.13:0,24,347	0/0:28,0:28:36.35:0,36,1433	0/1:34,0:34:22.63:23,0,334	0/1:19,0:19:54.92:55,0,70	0/0:28,0:28:81.10:0,81,1572	0/0:18,0:18:51.11:0,51,1093	0/0:35,0:35:99:0,99,2045	0/0:16,0:16:24.12:0,24,850	0/1:31,0:31:67.03:67,0,154	0/0:21,0:21:63.02:0,63,1188	0/0:16,0:16:39.07:0,39,824	0/1:24,0:24:52.42:52,0,348	0/1:42,0:41:99:397,0,292	0/1:35,0:35:99:185,0,323	0/0:27,0:27:81.21:0,81,1715	0/0:37,0:37:99:0,108,2063	0/0:26,0:26:72.13:0,72,1257	0/1:26,0:26:21.98:22,0,253	0/1:36,0:36:99:278,0,267	0/1:30,0:30:42.10:284,0,42	0/1:17,0:17:88.55:109,0,89
chr10	89936522	.	TTACA	T	6569.43	PASS	AB=0.852;AC=29;AF=0.518;AN=56;BaseQRankSum=14.020;DP=731;FS=3.473;HRun=0;HaplotypeScore=126.0125;InbreedingCoeff=0.7354;MQ=57.71;MQ0=3;MQRankSum=-3.675;QD=15.00;ReadPosRankSum=0.348;VQSLOD=4.6014;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:41:24.07:267,24,0	0/0:10,0:10:21.07:0,21,497	0/0:21,0:15:6.02:0,6,118	0/0:20,0:13:5.98:0,6,74	0/0:35,0:35:63.22:0,63,1397	1/1:7,13:19:27.09:426,27,0	1/1:13,13:27:30.09:442,30,0	1/1:16,0:16:9.03:121,9,0	0/1:25,2:27:37.57:38,0,1061	0/1:14,0:35:27.14:315,0,27	1/1:3,0:18:5.63:252,6,0	0/0:26,0:26:48.16:0,48,1142	0/1:20,0:20:0.94:1,0,914	0/0:33,0:34:69.24:0,69,1594	0/0:17,0:17:1.98:0,2,649	1/1:7,0:33:39.04:363,39,0	0/0:21,0:21:36.12:0,36,844	0/0:15,0:15:30.10:0,30,687	1/1:14,8:22:24.05:333,24,0	1/1:14,28:42:75.21:1156,75,0	1/1:15,18:33:39.13:616,39,0	0/0:27,0:27:63.22:0,63,1438	0/0:41,0:41:75.15:0,75,1608	0/0:25,0:25:42.14:0,42,944	1/1:11,0:26:24.03:223,24,0	1/1:11,21:33:66.18:967,66,0	1/1:5,23:29:47.94:738,48,0	1/1:6,9:15:21.06:312,21,0
chr10	89936622	.	AC	A	368.08	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.482;DP=559;FS=2.210;HRun=2;HaplotypeScore=59.8472;InbreedingCoeff=0.9791;MQ=78.35;MQ0=0;MQRankSum=-2.173;QD=26.29;ReadPosRankSum=-2.412;VQSLOD=2.7278;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:38.97:463,39,0	0/0:8,0:8:20.86:0,21,280	0/0:18,0:17:37.44:0,37,596	0/0:17,0:16:47.59:0,48,593	0/0:25,0:25:69.09:0,69,897	0/0:17,0:17:51.17:0,51,759	0/0:24,0:24:72.15:0,72,969	0/0:27,0:27:78.15:0,78,1046	0/0:30,0:30:90.27:0,90,1296	0/0:34,0:34:93.26:0,93,1292	0/0:17,0:17:48.11:0,48,652	0/0:18,0:18:54.16:0,54,786	0/0:16,0:16:48.11:0,48,673	0/0:24,0:24:72.16:0,72,993	0/0:5,0:5:15.05:0,15,224	0/0:20,0:20:42.14:0,42,629	0/0:10,0:10:27.04:0,27,378	0/0:22,0:22:63.18:0,63,900	0/0:19,0:19:54:0,54,743	0/0:15,0:15:42.12:0,42,594	0/0:22,0:22:59.78:0,60,838	0/0:25,0:25:75.24:0,75,1089	0/0:18,0:18:51.12:0,51,716	0/0:30,0:30:90.26:0,90,1281	0/0:29,0:29:84.28:0,84,1255	0/0:20,0:20:60.20:0,60,898	0/0:23,0:22:66.21:0,66,963	0/0:12,0:12:36.12:0,36,538
chr10	89937595	.	T	TGA	1813.63	PASS	AB=0.863;AC=39;AF=0.750;AN=52;BaseQRankSum=-5.025;DP=534;FS=2.057;HRun=0;HaplotypeScore=87.6885;InbreedingCoeff=0.1370;MQ=59.51;MQ0=4;MQRankSum=0.807;QD=4.01;ReadPosRankSum=-1.243;VQSLOD=2.4315;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:8.98:91,9,0	0/0:3,0:4:2.84:0,3,14	./.	./.	1/1:19,0:19:15.02:164,15,0	1/1:15,5:21:3.48:45,3,0	1/1:9,4:14:6.02:88,6,0	1/1:31,0:31:3.99:15,4,0	0/1:16,13:28:12.07:120,0,12	1/1:24,0:24:11.85:111,12,0	0/1:19,0:19:17.35:25,0,17	1/1:14,4:18:9.03:132,9,0	1/1:18,0:18:15.01:168,15,0	0/1:12,9:21:23.21:79,0,23	0/0:7,0:15:19.89:0,20,98	1/1:15,0:15:6.01:55,6,0	0/0:13,0:23:25.31:0,25,121	1/1:9,0:17:6:52,6,0	0/1:15,2:15:16.05:74,0,16	1/1:14,0:14:6.02:82,6,0	1/1:16,5:22:3.01:44,3,0	1/1:15,0:15:3:25,3,0	0/1:11,0:11:0:0,0,0	1/1:10,0:11:9.02:112,9,0	1/1:18,0:18:6.01:55,6,0	1/1:24,1:25:18.80:196,19,0	0/1:17,7:25:38.98:210,0,39	0/1:23,0:23:19.68:20,0,26
chr10	89937640	.	G	GAGAT	1689.79	PASS	AB=0.953;AC=22;AF=0.393;AN=56;BaseQRankSum=3.532;DP=549;FS=2.246;HRun=0;HaplotypeScore=110.2459;InbreedingCoeff=0.1854;MQ=69.80;MQ0=5;MQRankSum=-2.449;QD=5.36;ReadPosRankSum=1.482;VQSLOD=2.2605;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:26.91:298,27,0	1/1:2,0:2:1.08:22,1,0	0/0:20,0:17:34.74:0,35,357	0/0:23,0:11:29.69:0,30,252	0/1:33,0:32:58.96:59,0,473	0/0:16,0:16:35.70:0,36,290	0/0:12,0:12:2.30:0,2,128	0/0:36,0:34:87.46:0,87,803	0/1:23,0:22:6.39:6,0,127	1/1:18,1:22:51.82:490,52,0	0/1:2,0:20:8.07:46,0,8	0/0:19,0:19:26.43:0,26,223	0/1:21,0:21:99:136,0,153	0/0:21,0:21:29.48:0,29,276	1/1:16,0:16:9.16:172,9,0	1/1:0,10:13:5.94:166,6,0	0/1:20,0:20:0.82:136,0,1	0/1:10,0:10:68.58:69,0,111	0/1:16,0:13:15.68:16,0,181	0/0:20,0:20:5.04:0,5,301	0/0:18,0:18:26.35:0,26,209	0/0:20,0:20:19.70:0,20,322	0/0:13,0:13:24.14:0,24,196	0/1:16,0:16:34.62:35,0,166	1/1:3,24:28:6.02:167,6,0	0/1:22,0:22:19.66:20,0,277	0/1:32,0:32:29.54:30,0,439	0/0:16,0:16:7.75:0,8,249
chr10	89938249	.	G	GTATA	142.27	PASS	AB=0.929;AC=19;AF=0.594;AN=32;BaseQRankSum=-1.839;DP=101;FS=0.000;HRun=0;HaplotypeScore=29.8651;InbreedingCoeff=0.3316;MQ=45.99;MQ0=2;MQRankSum=-0.234;QD=2.03;ReadPosRankSum=-0.526;VQSLOD=0.7097;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:5,6:11:0:0,0,0	./.	./.	./.	0/1:7,0:7:0.01:0,0,0	./.	0/0:2,0:2:2.81:0,3,33	0/1:14,0:14:4.60:5,0,190	1/1:2,0:2:0.94:2,1,0	1/1:2,0:2:3.47:28,3,0	1/1:2,0:6:0.20:0,0,0	./.	./.	1/1:1,0:1:0.47:1,0,0	1/1:2,0:2:0.47:1,0,0	./.	1/1:10,0:10:3.01:36,3,0	0/1:12,0:12:1.74:155,0,2	0/0:3,0:3:9.03:0,9,114	./.	./.	./.	./.	./.	0/1:2,0:2:0:0,0,0	0/0:4,0:4:11.86:0,12,110	1/1:1,0:1:1.55:4,2,0	0/0:4,0:4:8.61:0,9,77
chr10	89938257	.	A	ATATGTGTGTGTGTGTG	807.91	PASS	AB=0.952;AC=21;AF=0.656;AN=32;BaseQRankSum=-3.706;DP=92;FS=3.431;HRun=0;HaplotypeScore=56.6188;InbreedingCoeff=0.2382;MQ=43.50;MQ0=3;MQRankSum=2.387;QD=13.47;ReadPosRankSum=-2.697;VQSLOD=0.9964;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:9:5.95:0,6,50	./.	./.	./.	1/1:6,0:6:8.27:71,8,0	./.	0/1:2,0:2:18.97:19,0,67	0/1:13,0:12:99:103,0,411	1/1:2,0:2:5.99:50,6,0	1/1:3,0:3:6.01:133,6,0	1/1:6,0:6:5.99:50,6,0	./.	./.	1/1:1,0:1:3:25,3,0	1/1:2,0:2:3:25,3,0	./.	1/1:1,3:9:3.01:139,3,0	0/1:10,0:12:99:266,0,144	0/0:3,0:3:8.98:0,9,87	./.	./.	./.	./.	./.	1/1:3,0:3:3:25,3,0	0/0:4,0:4:12.03:0,12,251	1/1:1,0:1:2.99:24,3,0	0/0:3,0:3:9:0,9,245
chr10	89938312	.	TATATAG	T	571.69	PASS	AB=1.000;AC=17;AF=0.370;AN=46;BaseQRankSum=-4.041;DP=126;FS=1.006;HRun=0;HaplotypeScore=31.2183;InbreedingCoeff=0.5565;MQ=69.95;MQ0=2;MQRankSum=-0.147;QD=18.44;ReadPosRankSum=0.312;VQSLOD=2.1711;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:12.85:0,13,124	./.	0/0:18,0:6:9.29:0,9,63	0/0:26,0:10:7.91:0,8,76	./.	./.	1/1:2,0:2:5.99:50,6,0	1/1:7,0:7:20.99:181,21,0	./.	0/1:4,0:4:16.07:16,0,76	0/0:3,0:3:3:0,3,25	./.	0/0:2,0:2:5.99:0,6,50	0/0:2,0:2:5.98:0,6,47	0/0:1,0:1:3:0,3,25	0/0:3,0:3:5.99:0,6,50	0/0:10,0:10:20.91:0,21,214	0/0:10,0:10:20.93:0,21,256	1/1:3,0:3:8.58:58,9,0	1/1:1,0:1:3:25,3,0	1/1:2,0:2:5.97:45,6,0	0/0:1,0:1:3:0,3,25	0/0:1,0:1:3:0,3,25	0/0:1,0:1:3:0,3,25	0/0:3,0:3:5.99:0,6,51	1/1:1,4:5:12:136,12,0	1/1:5,0:5:14.99:173,15,0	1/1:2,0:2:5.98:47,6,0
chr10	89938314	.	TATAG	T	601.11	PASS	AC=16;AF=0.348;AN=46;BaseQRankSum=-4.650;DP=136;FS=0.977;HRun=0;HaplotypeScore=30.3733;InbreedingCoeff=0.6553;MQ=69.00;MQ0=2;MQRankSum=-0.673;QD=19.39;ReadPosRankSum=0.368;VQSLOD=2.5677;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:12.43:0,12,119	./.	0/0:18,0:6:8.93:0,9,62	0/0:26,0:10:7.99:0,8,104	./.	./.	1/1:2,0:2:5.99:50,6,0	1/1:10,0:10:29.98:257,30,0	./.	0/0:4,0:4:1.29:0,1,78	0/0:3,0:3:3:0,3,25	./.	0/0:3,0:3:8.99:0,9,75	0/0:2,0:2:5.98:0,6,47	0/0:2,0:2:5.99:0,6,50	0/0:4,0:4:8.99:0,9,77	0/0:10,0:10:20.91:0,21,190	0/0:10,0:10:20.93:0,21,225	1/1:3,0:3:8.58:58,9,0	1/1:1,0:1:3:25,3,0	1/1:3,0:3:8.96:69,9,0	0/0:1,0:1:3:0,3,25	0/0:1,0:1:3:0,3,25	0/0:3,0:3:8.99:0,9,74	0/0:3,0:3:5.99:0,6,51	1/1:5,0:5:11.99:103,12,0	1/1:5,0:5:14.99:153,15,0	1/1:2,0:2:5.98:47,6,0
chr10	89938849	.	CACACACAG	C	2641.44	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-6.726;DP=694;FS=3.505;HRun=0;HaplotypeScore=194.8193;InbreedingCoeff=-0.0206;MQ=51.68;MQ0=52;MQRankSum=-1.249;QD=5.22;ReadPosRankSum=-3.373;VQSLOD=2.2678;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,3:37:40.74:659,41,0	1/1:9,0:8:3.01:30,3,0	0/1:41,0:22:6.52:7,0,204	0/1:38,0:23:65.20:110,0,65	0/0:23,0:18:8.97:0,9,43	0/1:20,0:19:25.46:66,0,25	0/1:26,0:24:41.19:125,0,41	1/1:32,0:27:55.27:396,55,0	0/1:16,0:12:0.56:82,0,1	0/0:25,0:21:41.33:0,41,447	0/0:20,0:17:14.68:0,15,259	0/1:31,0:28:47.43:170,0,47	0/1:18,0:16:14.16:14,0,21	0/0:13,0:12:7.01:0,7,44	1/1:27,0:25:2.94:29,3,0	0/0:33,0:30:30.02:0,30,582	1/1:34,1:31:7.61:357,8,0	0/1:26,0:25:74.49:74,0,145	1/1:12,1:10:1.02:153,1,0	1/1:7,0:7:8.97:71,9,0	0/1:66,0:59:14.36:164,0,14	0/1:12,0:8:21.73:73,0,22	0/0:11,0:9:2.88:0,3,15	0/0:40,0:40:17.79:0,18,207	0/0:23,0:23:26.28:0,26,487	0/1:30,0:25:95.23:148,0,95	0/1:16,0:15:39.02:72,0,39	0/1:4,0:3:14.11:14,0,22
chr10	89938851	.	CACACAG	C	5382.12	PASS	AB=0.988;AC=45;AF=0.804;AN=56;BaseQRankSum=-1.367;DP=711;FS=2.620;HRun=0;HaplotypeScore=172.0710;InbreedingCoeff=0.5668;MQ=50.17;MQ0=58;MQRankSum=-0.299;QD=8.85;ReadPosRankSum=1.756;VQSLOD=4.1363;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:36:36.96:392,37,0	1/1:2,7:8:3.01:68,3,0	0/1:39,0:20:6.42:6,0,224	0/1:36,0:21:44.18:117,0,44	1/1:22,1:18:7.71:32,8,0	1/1:19,1:19:27.07:232,27,0	1/1:27,2:26:35.59:301,36,0	1/1:32,2:28:70.39:569,70,0	1/1:17,0:13:23.54:182,24,0	0/0:24,0:20:45.99:0,46,510	0/0:21,0:18:14.68:0,15,255	1/1:30,1:28:48.43:329,48,0	1/1:18,1:16:8.20:91,8,0	1/1:13,1:13:10.71:42,11,0	1/1:7,20:25:2.94:67,3,0	0/0:32,0:29:30.03:0,30,473	1/1:30,7:33:46.71:773,47,0	0/1:25,1:25:5.09:292,0,5	1/1:12,1:10:25.80:222,26,0	1/1:6,1:7:14.23:193,14,0	1/1:69,0:61:40.43:347,40,0	1/1:12,0:7:9.92:74,10,0	1/1:11,2:10:2.68:11,3,0	1/1:39,2:41:41.60:255,42,0	0/0:26,0:26:26.27:0,26,400	1/1:30,1:25:43.49:457,43,0	1/1:15,1:14:29.42:239,29,0	1/1:6,1:6:8.37:91,8,0
chr10	89938853	.	CACAG	C	8153.23	PASS	AB=0.924;AC=45;AF=0.804;AN=56;BaseQRankSum=-2.567;DP=715;FS=1.915;HRun=0;HaplotypeScore=146.7861;InbreedingCoeff=0.5856;MQ=48.65;MQ0=62;MQRankSum=-1.163;QD=13.37;ReadPosRankSum=1.426;VQSLOD=4.7752;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:39:27.08:334,27,0	1/1:9,0:8:3.01:34,3,0	0/1:38,0:19:6.51:7,0,185	0/1:34,0:19:44.18:117,0,44	1/1:13,10:18:8.93:169,9,0	1/1:17,3:19:29.60:447,30,0	1/1:25,6:28:39.10:532,39,0	1/1:10,24:28:74.57:625,75,0	1/1:15,2:13:23.87:227,24,0	0/0:24,0:20:34.05:0,34,343	0/0:21,0:18:14.67:0,15,172	1/1:23,8:28:50.65:689,51,0	1/1:7,13:16:8.94:148,9,0	1/1:11,3:13:14.88:248,15,0	1/1:25,0:23:2.94:34,3,0	0/0:33,0:30:23.28:0,23,311	1/1:38,0:33:46.22:459,46,0	0/1:19,8:26:2.17:582,0,2	1/1:9,3:9:26.68:307,27,0	1/1:8,0:8:13.25:137,13,0	1/1:63,7:62:50.13:484,50,0	1/1:10,2:7:12.04:208,12,0	1/1:5,8:10:3.01:57,3,0	1/1:26,13:39:59.97:948,60,0	0/0:26,0:26:26.26:0,26,340	1/1:28,3:24:69.03:830,69,0	1/1:13,3:14:32.96:383,33,0	1/1:2,5:6:9.03:148,9,0
chr10	89938855	.	CAG	C	5238.39	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=-0.837;DP=719;FS=0.566;HRun=0;HaplotypeScore=145.6800;InbreedingCoeff=0.6564;MQ=47.65;MQ0=66;MQRankSum=-0.796;QD=8.56;ReadPosRankSum=0.762;VQSLOD=4.6779;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:40,2:40:21.42:250,21,0	1/1:9,0:8:2.98:21,3,0	0/1:36,0:17:6.48:6,0,173	0/1:31,0:16:44.18:116,0,44	1/1:21,4:18:8.67:71,9,0	1/1:18,1:18:29.36:238,29,0	1/1:33,1:30:38.66:286,39,0	1/1:33,0:26:74.47:547,74,0	1/1:17,0:13:23.95:194,24,0	0/0:26,0:21:30.13:0,30,427	0/0:21,0:18:14.09:0,14,121	1/1:29,2:28:37.12:355,37,0	1/1:20,0:16:8.95:68,9,0	1/1:13,0:12:14.96:120,15,0	1/1:25,0:23:8.90:70,9,0	0/0:34,0:31:29.82:0,30,257	1/1:36,1:32:43.17:362,43,0	1/1:27,0:26:28.27:360,28,0	1/1:13,0:10:26.52:180,27,0	1/1:10,0:10:14.65:120,15,0	1/1:68,2:62:51:398,51,0	1/1:11,1:7:11.98:103,12,0	1/1:12,1:10:2.99:23,3,0	1/1:40,1:41:65.30:487,65,0	0/0:26,0:26:26.24:0,26,239	1/1:28,3:24:69.41:544,69,0	1/1:16,0:14:34.94:249,35,0	1/1:7,0:6:8.95:67,9,0
chr10	89938857	.	G	GACAC	1471.33	PASS	AB=0.942;AC=20;AF=0.370;AN=54;BaseQRankSum=-6.476;DP=727;FS=0.000;HRun=0;HaplotypeScore=174.0363;InbreedingCoeff=-0.0769;MQ=47.19;MQ0=71;MQRankSum=-0.438;QD=3.07;ReadPosRankSum=-4.776;VQSLOD=0.9812;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:40:20.25:90,0,20	0/0:9,0:8:1.25:0,1,3	0/0:32,0:14:2.79:0,3,23	./.	0/1:27,0:19:3.20:3,0,41	0/1:17,0:16:3.66:4,0,96	0/1:35,0:31:18.12:18,0,95	1/1:34,0:26:15.10:109,15,0	0/0:17,0:13:1.82:0,2,23	1/1:15,14:25:47.29:709,47,0	0/1:11,9:18:13.66:138,0,14	0/1:29,0:26:33.87:34,0,140	0/0:20,0:15:8.61:0,9,62	0/0:13,0:12:7.65:0,8,72	1/1:26,0:23:4.68:47,5,0	0/1:14,19:32:11.68:277,0,12	0/1:38,0:33:11.12:11,0,120	0/1:27,0:26:8.96:9,0,149	0/0:15,0:12:2.13:0,2,60	0/0:9,0:9:2.95:0,3,21	0/0:69,0:61:11.88:0,12,89	0/0:12,0:7:9.47:0,9,83	0/0:13,0:10:3:0,3,25	0/1:44,0:43:29.87:30,0,282	1/1:11,11:26:11.24:111,11,0	0/1:31,0:24:18.73:19,0,101	0/1:17,0:15:18.83:19,0,56	0/0:8,0:6:8.99:0,9,76
chr10	89938877	.	CAG	C	291.92	PASS	AB=0.971;AC=21;AF=0.389;AN=54;BaseQRankSum=4.002;DP=741;FS=2.585;HRun=0;HaplotypeScore=157.1544;InbreedingCoeff=-0.3294;MQ=39.69;MQ0=108;MQRankSum=-0.015;QD=0.54;ReadPosRankSum=-3.360;VQSLOD=2.1016;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:39:23.01:44,0,23	1/1:9,0:8:2.68:11,3,0	0/0:3,0:1:2.99:0,3,23	./.	0/1:25,3:20:9.07:9,0,33	0/1:18,1:18:13.23:49,0,13	0/0:45,0:34:6.42:0,6,104	0/1:45,0:28:0.74:1,0,305	0/0:15,0:10:11.66:0,12,71	0/1:36,1:28:13.77:14,0,279	0/1:22,1:20:23.29:23,0,93	0/1:32,0:28:33.63:34,0,137	0/0:23,0:17:10.33:0,10,64	0/1:15,0:14:2.77:3,0,56	0/0:30,0:27:2.70:0,3,68	0/1:36,1:31:62.18:62,0,119	0/1:36,0:30:15:15,0,201	0/1:26,0:25:15.72:16,0,213	0/0:21,0:14:12.07:0,12,163	1/1:13,0:12:3.13:39,3,0	0/1:69,1:54:1.18:1,0,9	0/1:14,1:9:1.25:1,0,43	0/1:15,1:12:10.77:11,0,40	0/0:49,1:49:68.16:0,68,453	0/1:18,1:17:3.55:4,0,105	0/1:35,3:27:82.93:83,0,149	0/1:15,0:13:13.42:13,0,79	0/0:9,0:6:7.39:0,7,27
chr10	89938903	.	CACAG	C	94.96	PASS	AB=0.951;AC=5;AF=0.096;AN=52;BaseQRankSum=5.500;DP=710;FS=2.341;HRun=0;HaplotypeScore=163.3327;InbreedingCoeff=-0.1398;MQ=40.43;MQ0=102;MQRankSum=-0.617;QD=0.52;ReadPosRankSum=-0.884;VQSLOD=2.8587;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,15:43:62.90:93,0,63	0/0:9,0:8:3.01:0,3,76	./.	./.	0/0:23,0:16:12.23:0,12,198	0/1:15,0:14:17.07:17,0,18	0/0:40,0:29:13.94:0,14,78	0/0:37,0:21:43.54:0,44,284	0/0:20,0:15:30.07:0,30,530	0/0:33,0:24:31.81:0,32,342	0/0:18,0:17:10.71:0,11,79	0/0:31,0:27:19.68:0,20,652	0/0:26,0:20:29.97:0,30,542	0/0:17,0:16:4.25:0,4,410	0/0:26,0:23:20.41:0,20,373	0/0:31,0:24:3.41:0,3,220	0/0:40,0:34:37.93:0,38,572	0/0:22,0:21:39.80:0,40,495	0/0:19,0:13:6.31:0,6,118	0/0:17,0:17:5.56:0,6,60	0/1:68,0:52:5.35:5,0,127	0/0:20,0:12:8.69:0,9,344	0/1:17,0:12:22.37:22,0,208	0/0:53,0:51:97.98:0,98,1540	0/0:19,0:17:13.77:0,14,119	0/1:38,0:27:66.58:67,0,153	0/0:13,0:11:21.80:0,22,128	0/0:8,0:6:8.77:0,9,51
chr10	89938907	.	GACACACACAC	G	2501.62	PASS	AB=0.871;AC=15;AF=0.288;AN=52;BaseQRankSum=2.692;DP=690;FS=2.132;HRun=0;HaplotypeScore=181.6291;InbreedingCoeff=0.3981;MQ=41.00;MQ0=102;MQRankSum=1.950;QD=8.84;ReadPosRankSum=-1.491;VQSLOD=2.6894;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:15.52:0,16,264	0/0:8,0:7:3.01:0,3,94	./.	0/0:4,0:1:2.99:0,3,24	0/0:23,0:16:6.49:0,6,255	0/0:10,5:15:0.94:0,1,2	0/1:34,2:27:11.49:206,0,11	1/1:25,5:16:14.44:170,14,0	0/0:20,0:16:30.10:0,30,856	0/0:30,0:22:26.73:0,27,209	1/1:14,0:14:9.40:113,9,0	0/0:27,0:24:34.67:0,35,1078	0/0:25,0:19:24.08:0,24,813	0/0:16,0:16:9.91:0,10,595	0/0:21,0:21:24.08:0,24,673	0/1:29,0:25:84.34:123,0,84	0/0:30,0:37:36.12:0,36,1037	0/0:23,0:22:24.49:0,24,733	0/1:14,4:13:16.02:111,0,16	0/1:11,7:18:16.68:28,0,17	1/1:52,0:48:41.86:898,42,0	0/0:20,0:13:14.12:0,14,526	0/0:15,0:11:11.53:0,12,356	0/0:45,0:52:55.82:0,56,2236	0/1:18,0:15:43.36:43,0,61	1/1:25,12:27:40.92:900,41,0	1/1:10,0:11:2.92:75,3,0	./.
chr10	89939348	.	T	TCAAA	11011.43	PASS	AB=0.643;AC=35;AF=0.625;AN=56;BaseQRankSum=-2.684;DP=844;FS=4.916;HRun=0;HaplotypeScore=172.5076;InbreedingCoeff=0.8982;MQ=62.01;MQ0=19;MQRankSum=0.344;QD=20.24;ReadPosRankSum=0.640;VQSLOD=4.4349;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,111,1753	0/0:11,0:11:12.04:0,12,190	0/0:27,0:22:20.84:0,21,297	0/0:21,0:13:15.05:0,15,231	1/1:13,17:30:48.10:1013,48,0	1/1:17,0:14:29.94:109,30,0	1/1:39,0:29:44.89:163,45,0	1/1:23,0:19:13.05:46,13,0	1/1:14,16:32:42.62:1002,43,0	0/0:31,0:31:60.18:0,60,864	0/0:31,0:31:47.27:0,47,693	1/1:19,25:44:57.20:1328,57,0	1/1:14,21:35:14.90:1180,15,0	1/1:15,19:34:40.38:933,40,0	0/0:35,0:35:60.20:0,60,945	0/0:36,0:35:72.24:0,72,1136	0/0:32,0:32:66.21:0,66,1013	1/1:12,12:25:30.10:715,30,0	1/1:15,0:14:17.47:64,17,0	1/1:17,0:14:14.97:54,15,0	1/1:47,0:42:72.22:261,72,0	1/1:21,14:36:42.49:847,42,0	0/1:12,15:27:2.32:932,0,2	1/1:19,34:54:87.30:2074,87,0	0/0:27,0:27:39.12:0,39,593	1/1:32,0:28:0.63:117,1,0	1/1:22,0:21:29.74:109,30,0	1/1:13,0:12:17.47:64,17,0
chr10	89939353	.	C	CAA	8703.60	PASS	AB=0.954;AC=26;AF=0.464;AN=56;BaseQRankSum=3.947;DP=858;FS=0.278;HRun=3;HaplotypeScore=142.5131;InbreedingCoeff=0.3095;MQ=61.35;MQ0=19;MQRankSum=0.671;QD=15.65;ReadPosRankSum=7.693;VQSLOD=1.5422;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,1967	0/0:12,0:12:27.09:0,27,377	0/0:32,0:25:66.59:0,67,875	0/0:23,0:14:36.06:0,36,473	0/1:32,0:32:98.63:99,0,546	1/1:1,17:15:36.12:660,36,0	1/1:11,28:29:54.19:989,54,0	1/1:5,18:20:51.63:827,52,0	0/1:34,0:34:99:122,0,465	0/0:31,0:31:90.27:0,90,1233	0/0:31,0:31:83.59:0,84,1167	0/1:45,0:44:99:160,0,520	0/1:35,0:35:99:155,0,362	0/1:36,0:36:99:105,0,468	0/0:34,0:34:99:0,99,1347	0/0:34,0:33:99:0,102,1405	0/0:32,0:32:87.29:0,87,1216	0/1:22,0:22:93.22:93,0,248	1/1:2,13:14:36.01:550,36,0	1/1:1,17:15:30.06:485,30,0	1/1:5,46:47:90:1640,90,0	0/1:32,0:32:75.60:76,0,601	0/1:24,0:24:99:127,0,239	0/1:57,0:56:99:286,0,559	0/0:25,0:25:69.23:0,69,963	0/1:5,27:29:2.18:1203,0,2	1/1:3,20:22:41.94:742,42,0	1/1:1,16:16:21.07:384,21,0
chr10	89940006	.	AC	A	1014.98	PASS	AB=0.978;AC=8;AF=0.143;AN=56;BaseQRankSum=-5.576;DP=519;FS=14.552;HRun=11;HaplotypeScore=104.1331;InbreedingCoeff=0.7291;MQ=71.03;MQ0=5;MQRankSum=-0.888;QD=9.85;ReadPosRankSum=1.784;VQSLOD=1.2663;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:65.96:0,66,296	1/1:0,8:8:23.97:197,24,0	0/1:21,0:18:4.06:4,0,93	0/1:20,0:17:28.92:29,0,84	0/0:15,0:15:35.06:0,35,149	0/0:16,0:13:27.45:0,27,122	0/0:22,0:22:44.01:0,44,198	0/0:15,0:12:19.34:0,19,90	0/0:21,0:21:42.85:0,43,177	0/0:18,0:16:38.36:0,38,171	0/0:27,0:26:60.38:0,60,269	0/0:15,0:15:34.98:0,35,147	0/0:13,0:13:26.78:0,27,111	0/0:11,0:11:29.62:0,30,125	1/1:0,21:19:47.94:394,48,0	0/0:19,0:17:35.68:0,36,160	1/1:7,25:31:65.89:542,66,0	0/0:11,0:11:29.58:0,30,123	0/0:18,0:16:38.21:0,38,169	0/0:19,0:18:43.96:0,44,197	0/0:19,0:19:27.44:0,27,122	0/0:11,0:11:24.11:0,24,99	0/0:12,0:12:27.10:0,27,116	0/0:19,0:19:37.50:0,37,154	0/0:19,0:18:41.02:0,41,182	0/0:25,0:23:52.30:0,52,234	0/0:25,0:23:57.68:0,58,257	0/0:10,0:8:10.98:0,11,49
chr10	89940011	.	C	CCT	11559.10	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-8.667;DP=528;FS=20.517;HRun=0;HaplotypeScore=76.5135;InbreedingCoeff=0.5723;MQ=68.46;MQ0=13;MQRankSum=2.288;QD=25.02;ReadPosRankSum=4.045;VQSLOD=3.5577;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:72.25:1208,72,0	0/1:9,0:9:3.70:4,0,10	0/0:25,0:18:5.51:0,6,264	0/0:19,0:15:21.68:0,22,302	0/1:15,0:15:5.32:70,0,5	1/1:1,16:14:29.93:506,30,0	1/1:0,22:22:48.16:806,48,0	1/1:4,14:15:35.89:421,36,0	1/1:20,0:20:39.18:135,39,0	1/1:0,18:17:48.13:755,48,0	1/1:0,28:28:69.17:1134,69,0	1/1:15,0:15:32.09:137,32,0	1/1:12,0:12:24.57:85,25,0	1/1:12,0:12:27.34:120,27,0	0/0:22,0:20:2.22:0,2,33	1/1:0,15:13:39.13:658,39,0	0/1:30,0:29:14.57:20,0,15	1/1:13,0:11:26.37:90,26,0	1/1:4,16:16:45.13:725,45,0	1/1:0,19:18:48.16:810,48,0	1/1:1,18:19:30.09:508,30,0	1/1:11,0:11:22.33:77,22,0	1/1:10,0:10:23.97:105,24,0	1/1:19,0:19:34.69:120,35,0	1/1:1,19:19:45.15:760,45,0	1/1:3,25:25:69.14:1051,69,0	1/1:0,25:24:63.21:1049,63,0	1/1:0,11:9:12.04:203,12,0
chr10	89940012	.	C	CT	6871.63	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=-2.676;DP=531;FS=4.836;HRun=0;HaplotypeScore=84.2557;InbreedingCoeff=0.5570;MQ=68.04;MQ0=14;MQRankSum=-0.211;QD=14.11;ReadPosRankSum=8.956;VQSLOD=5.4622;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:31:63.30:276,63,0	1/1:9,0:9:3.55:43,4,0	0/0:25,0:18:37.76:0,38,333	0/0:19,0:15:21.27:0,21,272	1/1:3,14:17:31.14:483,31,0	1/1:18,0:15:26.78:112,27,0	1/1:22,0:22:42.72:190,43,0	0/1:18,0:13:56.95:82,0,57	1/1:0,20:20:48.16:651,48,0	1/1:20,0:18:9.41:177,9,0	1/1:30,0:29:61.99:267,62,0	1/1:0,15:15:39.13:524,39,0	1/1:1,11:12:30.09:407,30,0	1/1:0,13:13:33.11:443,33,0	1/1:23,0:20:20.54:63,21,0	1/1:15,0:13:34.82:146,35,0	0/1:30,0:29:12.89:98,0,13	1/1:2,12:12:33.11:444,33,0	1/1:19,0:15:23.83:185,24,0	1/1:19,0:18:42.67:179,43,0	1/1:18,0:18:9.95:94,10,0	1/1:0,12:12:27.09:368,27,0	1/1:0,10:10:30.10:395,30,0	1/1:0,19:19:42.14:571,42,0	1/1:18,1:18:40.86:195,41,0	1/1:27,0:24:28.35:204,28,0	1/1:26,0:24:55.77:230,56,0	1/1:10,0:8:10.71:45,11,0
chr10	89941836	.	TA	T	863	PASS	AB=0.921;AC=29;AF=0.518;AN=56;BaseQRankSum=11.082;DP=363;FS=8.192;HRun=11;HaplotypeScore=64.4446;InbreedingCoeff=0.7358;MQ=74.45;MQ0=2;MQRankSum=-1.922;QD=4.59;ReadPosRankSum=1.960;VQSLOD=0.7710;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:53.57:0,54,743	0/0:7,0:7:17.98:0,18,177	0/1:21,0:18:34.20:34,0,45	0/0:15,0:11:1.48:0,1,8	1/1:13,0:12:25.87:139,26,0	0/0:14,1:15:20.47:0,20,423	0/0:4,0:4:11.98:0,12,115	0/0:23,0:23:54.09:0,54,551	1/1:14,0:14:28.70:152,29,0	1/1:13,0:13:14.63:37,15,0	1/1:8,0:8:7.76:18,8,0	1/1:10,0:10:23.24:133,23,0	1/1:4,0:4:5.78:32,6,0	1/1:3,0:3:8.61:45,9,0	0/0:11,0:11:18.04:0,18,186	1/1:14,0:14:10.58:25,11,0	0/0:21,1:21:26.42:0,26,466	1/1:21,0:21:48.62:262,49,0	0/1:10,1:10:0.53:1,0,200	0/0:14,0:13:30.08:0,30,320	0/0:3,0:3:9.02:0,9,96	1/1:3,0:3:5.68:28,6,0	1/1:10,0:10:11.46:60,11,0	1/1:6,0:6:11.40:56,11,0	1/1:20,0:20:19.28:47,19,0	0/0:14,1:15:14.44:0,14,352	0/0:17,2:19:17.42:0,17,362	0/1:14,2:16:1.16:1,0,400
chr10	89941846	.	AAC	A	1820.22	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=9.519;DP=353;FS=28.344;HRun=0;HaplotypeScore=62.7697;InbreedingCoeff=0.8533;MQ=74.68;MQ0=2;MQRankSum=-3.213;QD=13.69;ReadPosRankSum=2.923;VQSLOD=1.4642;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1541	0/0:8,0:8:21.05:0,21,341	0/0:15,0:13:16.33:0,16,212	0/1:11,0:5:8.14:8,0,20	1/1:12,0:11:19.25:58,19,0	0/0:16,0:16:48.05:0,48,808	0/0:4,0:4:12.04:0,12,196	0/0:26,0:26:78.20:0,78,1205	1/1:11,0:11:21.80:67,22,0	1/1:0,12:12:36.10:482,36,0	1/1:0,7:7:20.98:268,21,0	1/1:11,0:11:16.83:50,17,0	1/1:4,0:4:4.26:13,4,0	1/1:3,0:3:6.48:20,6,0	0/0:10,0:10:24.05:0,24,376	1/1:1,9:10:13.14:320,13,0	0/0:25,0:24:60.06:0,60,962	1/1:20,0:20:34.12:101,34,0	0/0:13,0:12:35.94:0,36,494	0/0:12,0:11:33.07:0,33,565	0/0:4,0:4:12.03:0,12,190	1/1:2,0:2:4.44:14,4,0	1/1:6,0:6:8.70:27,9,0	1/1:5,0:5:8.88:27,9,0	1/1:0,19:19:43.03:584,43,0	0/0:18,0:18:54.01:0,54,771	0/0:17,0:17:45.03:0,45,730	0/0:18,0:18:53.93:0,54,843
chr10	89941847	.	AC	A	2757.33	PASS	AB=0.958;AC=28;AF=0.500;AN=56;BaseQRankSum=8.433;DP=354;FS=25.048;HRun=2;HaplotypeScore=53.3361;InbreedingCoeff=0.8276;MQ=74.72;MQ0=2;MQRankSum=-4.185;QD=18.76;ReadPosRankSum=2.916;VQSLOD=2.2631;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.68:0,97,1158	0/0:8,0:8:21.05:0,21,252	0/1:15,0:13:17.88:18,0,120	0/1:10,0:5:1.10:1,0,13	1/1:0,12:12:27.09:345,27,0	0/0:16,0:16:44.96:0,45,585	0/0:4,0:4:9.03:0,9,120	0/0:27,0:27:81.16:0,81,928	1/1:0,11:11:30.10:385,30,0	1/1:12,0:12:35.19:213,35,0	1/1:7,0:7:20.47:120,20,0	1/1:0,10:10:24.08:306,24,0	1/1:0,4:4:6.02:77,6,0	1/1:0,3:3:9.03:116,9,0	0/0:11,0:11:27.04:0,27,313	1/1:10,0:10:12.46:123,12,0	0/0:24,0:23:56.27:0,56,693	1/1:1,19:20:51.16:645,51,0	0/0:13,0:12:33.51:0,34,376	0/0:13,0:12:36.05:0,36,431	0/0:4,0:4:12.03:0,12,146	1/1:0,2:2:6.02:78,6,0	1/1:0,6:6:12.04:154,12,0	1/1:0,5:5:12.04:155,12,0	1/1:19,0:19:41.81:239,42,0	0/0:17,0:17:48.58:0,49,570	0/0:18,0:18:42.59:0,43,532	0/0:18,0:18:47.82:0,48,604
chr10	89941856	.	ATT	A	1007.36	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=0.415;DP=342;FS=2.349;HRun=9;HaplotypeScore=64.0171;InbreedingCoeff=0.8222;MQ=75.27;MQ0=3;MQRankSum=1.933;QD=23.43;ReadPosRankSum=1.943;VQSLOD=2.9677;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.32:0,93,1524	1/1:1,6:7:18.05:210,18,0	0/0:14,0:12:16.69:0,17,165	0/0:12,0:6:6:0,6,41	0/0:13,0:12:33.10:0,33,504	0/0:12,0:12:33.10:0,33,497	0/0:4,0:4:12.03:0,12,171	0/0:23,0:23:57.19:0,57,912	0/0:13,0:13:30.08:0,30,446	0/0:11,0:11:27.09:0,27,443	0/0:7,0:7:15.05:0,15,245	0/0:9,0:9:21.03:0,21,315	0/0:5,0:5:8.99:0,9,97	./.	1/1:1,9:10:21.06:245,21,0	0/0:8,0:8:21.07:0,21,345	1/1:2,24:24:60.17:692,60,0	0/0:20,0:20:51.16:0,51,792	0/0:14,0:13:36.12:0,36,589	0/0:14,0:14:42.07:0,42,612	0/0:2,0:2:6.02:0,6,98	0/0:3,0:3:6.02:0,6,97	0/0:6,0:6:9.02:0,9,125	0/0:3,0:3:9.02:0,9,123	0/0:16,0:17:39.04:0,39,549	0/0:17,0:17:45.14:0,45,713	0/0:17,0:17:42.14:0,42,687	0/0:19,0:19:54.16:0,54,837
chr10	89942785	.	GTTTTT	G	4697.19	PASS	AB=0.600;AC=19;AF=0.339;AN=56;BaseQRankSum=0.497;DP=639;FS=1.902;HRun=18;HaplotypeScore=125.5952;InbreedingCoeff=0.8979;MQ=63.55;MQ0=6;MQRankSum=-4.173;QD=21.16;ReadPosRankSum=8.425;VQSLOD=1.6451;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,12:19:17.57:261,18,0	0/0:5,0:10:23.33:0,23,504	0/0:46,0:16:32.75:0,33,377	0/0:45,0:12:14:0,14,185	0/0:18,0:35:88.34:0,88,1624	1/1:8,14:25:40.61:525,41,0	1/1:9,11:20:23.37:348,23,0	1/1:15,11:27:32.15:455,32,0	0/0:9,0:17:30.10:0,30,630	0/0:14,0:20:48.16:0,48,1081	0/0:27,0:27:54.11:0,54,1059	0/0:8,0:17:27.05:0,27,468	0/0:12,0:15:35.79:0,36,687	0/0:8,0:14:15.05:0,15,300	0/0:12,0:22:42.12:0,42,910	0/0:18,0:25:45.09:0,45,966	0/0:14,0:24:27.09:0,27,563	0/0:9,0:26:36.12:0,36,834	1/1:9,7:16:17.43:255,17,0	1/1:11,17:30:17.09:691,17,0	1/1:5,5:11:7.98:129,8,0	0/0:9,0:13:30.10:0,30,696	0/0:7,0:14:30.46:0,30,542	0/0:11,0:20:32.89:0,33,692	0/0:17,0:22:42.14:0,42,944	0/1:11,21:33:29.18:814,0,29	1/1:3,15:20:44.49:624,44,0	1/1:7,13:21:41.58:595,42,0
chr10	89943285	.	C	CT	3171.26	PASS	AB=0.837;AC=23;AF=0.426;AN=54;BaseQRankSum=-5.603;DP=492;FS=10.963;HRun=12;HaplotypeScore=64.6091;InbreedingCoeff=0.4537;MQ=72.20;MQ0=1;MQRankSum=-1.367;QD=10.16;ReadPosRankSum=-0.787;VQSLOD=1.5602;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,19:37:40.63:557,41,0	./.	0/1:20,0:17:5.06:5,0,70	0/0:14,0:10:1.67:0,2,30	0/1:19,3:22:12.98:13,0,258	0/1:10,10:21:7.92:241,0,8	1/1:4,9:12:2.07:168,2,0	1/1:18,20:38:37.05:630,37,0	0/0:16,0:16:35.75:0,36,262	0/0:13,0:13:26.81:0,27,196	0/0:6,0:6:14.91:0,15,109	0/0:9,0:9:23.85:0,24,174	0/1:10,2:13:32.45:32,0,111	0/0:9,0:9:20.84:0,21,153	0/0:11,0:11:26.82:0,27,195	0/0:12,0:12:29.78:0,30,216	0/0:28,0:28:62.57:0,63,457	0/0:18,0:19:46.44:0,46,323	1/1:13,19:32:38.23:505,38,0	1/1:8,15:23:18.50:327,19,0	1/1:3,16:19:30.48:284,30,0	0/0:13,0:14:28.83:0,29,203	0/1:13,1:15:3.33:3,0,131	0/0:25,1:28:40.78:0,41,385	0/1:9,1:10:5.33:5,0,127	0/1:6,9:17:24.01:236,0,24	1/1:10,10:20:5.08:195,5,0	1/1:3,6:10:17.86:160,18,0
chr10	89943414	.	AT	A	851.28	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=-4.108;DP=293;FS=0.671;HRun=8;HaplotypeScore=48.1459;InbreedingCoeff=0.7992;MQ=75.02;MQ0=1;MQRankSum=2.915;QD=18.11;ReadPosRankSum=1.468;VQSLOD=3.2834;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:33.10:0,33,397	0/0:4,0:4:12.04:0,12,145	0/0:14,0:10:17.64:0,18,168	0/0:13,0:11:3.92:0,4,105	1/1:2,8:10:17.98:165,18,0	0/0:14,0:14:36.11:0,36,434	0/0:4,0:4:3.01:0,3,36	0/0:23,0:22:51.10:0,51,586	1/1:0,3:3:9.01:87,9,0	0/0:4,0:13:28.88:0,29,158	0/0:1,0:7:13.38:0,13,69	1/1:0,5:5:12.02:116,12,0	1/1:0,5:5:15.02:145,15,0	1/1:0,2:2:3:29,3,0	0/0:7,0:7:9.03:0,9,109	0/0:2,0:7:17.37:0,17,98	0/0:26,0:25:57.17:0,57,687	1/1:2,18:20:45.07:435,45,0	0/0:29,0:29:78.21:0,78,911	0/0:10,0:10:24.06:0,24,278	0/0:5,0:5:15.05:0,15,181	./.	1/1:1,0:1:3:25,3,0	1/1:0,1:1:3:29,3,0	0/0:1,0:6:8.63:0,9,44	0/0:15,0:16:47.97:0,48,535	0/0:18,0:18:45.11:0,45,520	0/0:13,0:13:33.10:0,33,399
chr10	89943436	.	AT	A	5626.56	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-1.054;DP=315;FS=22.962;HRun=4;HaplotypeScore=36.3861;InbreedingCoeff=0.9360;MQ=57.71;MQ0=3;MQRankSum=-4.623;QD=29.93;ReadPosRankSum=3.063;VQSLOD=2.8499;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:15:30.09:360,30,0	1/1:0,5:5:12.02:144,12,0	0/0:14,0:9:27.05:0,27,345	0/0:14,0:10:21.07:0,21,284	0/0:7,0:7:21.07:0,21,291	1/1:0,17:17:42.13:502,42,0	1/1:0,2:2:6.02:72,6,0	1/1:2,29:30:87.24:1019,87,0	0/0:7,0:7:18.05:0,18,231	0/0:14,0:14:42.13:0,42,572	0/0:13,0:13:33.10:0,33,437	0/0:6,0:6:15.05:0,15,209	0/0:4,0:4:12.04:0,12,166	0/0:5,0:5:12.04:0,12,165	1/1:0,10:10:24.07:288,24,0	0/0:7,0:7:21.07:0,21,290	1/1:0,32:32:72.22:864,72,0	0/0:21,0:21:54.12:0,54,711	1/1:3,17:19:48.15:573,48,0	1/1:0,11:11:33.10:393,33,0	1/1:1,4:5:12.04:144,12,0	0/0:3,0:3:9.03:0,9,126	0/0:5,0:5:15.05:0,15,208	0/0:2,0:2:5.98:0,6,62	0/0:5,0:5:15.01:0,15,172	1/1:1,16:17:26.31:551,26,0	1/1:0,12:12:36.11:430,36,0	1/1:0,10:10:24.07:288,24,0
chr10	89943891	.	C	CT	1437.69	PASS	AB=0.915;AC=46;AF=0.821;AN=56;BaseQRankSum=-1.126;DP=406;FS=18.634;HRun=11;HaplotypeScore=65.3104;InbreedingCoeff=0.3506;MQ=58.48;MQ0=0;MQRankSum=-4.477;QD=4.13;ReadPosRankSum=0.687;VQSLOD=0.0761;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:23:14.44:15,0,14	1/1:6,0:9:5.75:30,6,0	0/0:21,0:17:23.55:0,24,161	0/0:13,0:10:6.50:0,7,46	0/1:12,0:12:0:0,0,0	1/1:11,7:18:14.82:135,15,0	0/1:12,3:15:0.67:53,0,1	1/1:22,11:31:12.84:296,13,0	1/1:7,0:7:2.75:18,3,0	0/0:20,0:19:3.58:0,4,12	1/1:8,0:7:3.85:22,4,0	1/1:5,0:5:1.73:11,2,0	0/1:3,0:3:0:0,0,0	1/1:10,0:8:5.95:42,6,0	1/1:13,7:20:15.50:154,16,0	1/1:12,0:10:1.23:24,1,0	1/1:18,10:28:18.13:159,18,0	1/1:11,0:10:6.83:37,7,0	1/1:9,1:18:14.50:133,15,0	1/1:5,0:12:17.26:118,17,0	1/1:6,0:6:3.46:24,3,0	1/1:1,0:1:2.92:17,3,0	1/1:8,0:7:4.76:28,5,0	1/1:9,0:7:0.94:2,1,0	1/1:10,0:10:4.71:29,5,0	1/1:19,8:27:20.75:158,21,0	1/1:16,0:32:2.67:15,3,0	1/1:3,1:8:8.67:47,9,0
chr10	89944265	.	C	CT	1911.87	PASS	AB=0.827;AC=26;AF=0.464;AN=56;BaseQRankSum=-2.737;DP=565;FS=0.925;HRun=14;HaplotypeScore=73.2416;InbreedingCoeff=0.2826;MQ=65.37;MQ0=15;MQRankSum=1.660;QD=5.33;ReadPosRankSum=-2.636;VQSLOD=1.8125;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,2:26:6.80:7,0,216	0/1:4,1:5:14.51:15,0,45	0/0:63,0:16:6.61:0,7,32	0/1:61,0:21:13.70:14,0,54	0/1:25,1:27:38.07:38,0,197	1/1:4,11:15:2.94:117,3,0	1/1:5,12:21:15.16:197,15,0	1/1:16,14:30:15.41:316,15,0	0/1:11,1:12:16.16:16,0,129	1/1:11,2:20:25.14:160,25,0	0/1:6,7:13:1.60:93,0,2	0/0:8,0:9:13.83:0,14,83	0/0:4,0:4:11.82:0,12,77	0/0:11,0:11:15.11:0,15,86	0/0:15,0:15:28.41:0,28,157	1/1:6,0:6:6.61:37,7,0	0/0:36,0:36:72.32:0,72,420	0/0:24,1:28:26.71:0,27,282	0/1:12,2:13:51.38:71,0,51	0/1:15,6:22:3.25:272,0,3	0/1:5,2:7:9.02:46,0,9	0/0:9,0:9:17.72:0,18,114	0/0:11,0:11:20.63:0,21,134	0/0:19,0:18:12.31:0,12,200	1/1:16,3:19:12.68:195,13,0	1/1:21,4:24:9.75:276,10,0	0/1:6,14:20:17.48:86,0,17	1/1:2,9:12:17.84:146,18,0
chr10	89944377	.	CT	C	1551.66	PASS	AB=0.772;AC=21;AF=0.375;AN=56;BaseQRankSum=-2.805;DP=430;FS=6.050;HRun=14;HaplotypeScore=78.5723;InbreedingCoeff=0.1799;MQ=63.08;MQ0=6;MQRankSum=-3.099;QD=6.04;ReadPosRankSum=1.426;VQSLOD=2.6924;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,11:22:39.98:257,40,0	1/1:1,4:6:13.93:88,14,0	0/0:19,0:10:12.98:0,13,74	0/1:22,1:13:8.56:9,0,23	0/0:19,1:20:3.91:0,4,201	0/1:4,5:11:4.53:91,0,5	1/1:8,11:19:6.48:183,6,0	0/1:12,7:18:4.55:103,0,5	0/0:12,1:13:6.27:0,6,182	0/0:9,0:17:43.40:0,43,268	0/0:10,0:13:25.94:0,26,154	0/1:9,0:9:2.28:2,0,57	0/0:10,0:10:17.76:0,18,133	0/1:4,1:5:16.95:17,0,20	1/1:5,7:15:2.11:132,2,0	0/0:8,0:9:11.69:0,12,73	0/1:14,10:25:15.25:256,0,15	0/0:20,1:21:26.17:0,26,345	1/1:5,8:14:22.33:136,22,0	0/1:13,9:21:13.30:147,0,13	0/0:9,1:10:3.89:0,4,30	0/0:11,0:11:5.36:0,5,106	0/1:18,0:18:3.06:3,0,178	0/0:12,0:12:23.89:0,24,190	0/0:11,0:18:37.37:0,37,218	0/1:7,6:15:17.14:107,0,17	0/1:11,6:17:5.09:102,0,5	0/1:4,6:11:7.97:89,0,8
chr10	89944396	.	CT	C	4974.55	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.971;DP=419;FS=15.365;HRun=9;HaplotypeScore=61.3430;InbreedingCoeff=0.6196;MQ=52.14;MQ0=13;MQRankSum=-0.312;QD=13.90;ReadPosRankSum=2.384;VQSLOD=3.1948;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,14:20:31.82:279,32,0	1/1:1,6:7:16.78:134,17,0	0/0:31,0:7:4.80:0,5,66	0/0:28,2:6:6.90:0,7,65	1/1:4,8:12:14.92:137,15,0	1/1:2,8:10:14.96:129,15,0	1/1:5,11:15:24:219,24,0	1/1:10,10:17:23.99:219,24,0	1/1:4,9:13:24.01:219,24,0	1/1:10,7:17:35.77:293,36,0	1/1:6,10:16:29.82:262,30,0	1/1:4,8:12:14.79:137,15,0	1/1:5,3:8:2.95:27,3,0	1/1:1,6:7:12.01:110,12,0	1/1:6,10:16:30:273,30,0	1/1:4,4:8:9:82,9,0	1/1:10,12:22:39:356,39,0	1/1:12,7:19:27.79:281,28,0	1/1:5,13:17:35.99:325,36,0	1/1:7,12:18:32.53:286,33,0	1/1:2,4:6:2.98:27,3,0	1/1:1,10:11:24.01:220,24,0	1/1:6,9:15:22.78:187,23,0	1/1:5,3:8:11.72:105,12,0	1/1:6,13:19:35.94:320,36,0	1/1:7,8:14:17.99:165,18,0	1/1:11,4:12:9.89:106,10,0	1/1:6,2:8:8.96:76,9,0
chr10	89945502	.	G	GTCTGTCTA	11754.68	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=-0.920;DP=762;FS=5.221;HRun=0;HaplotypeScore=233.2374;InbreedingCoeff=0.2533;MQ=60.38;MQ0=4;MQRankSum=-0.617;QD=17.81;ReadPosRankSum=6.112;VQSLOD=3.2142;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:37.50:0,38,680	1/1:0,0:6:3.01:110,3,0	0/0:27,0:14:35.70:0,36,324	0/0:36,0:16:35.98:0,36,367	0/1:33,0:33:26.86:369,0,27	1/1:1,0:33:3.01:110,3,0	1/1:29,0:29:50.87:498,51,0	1/1:52,0:51:99:1181,124,0	0/1:35,0:35:99:532,0,125	1/1:3,29:35:92.92:2043,93,0	0/0:1,15:17:2.90:0,3,22	1/1:31,0:31:23.67:426,24,0	0/1:29,0:29:27.58:335,0,28	0/1:20,0:20:49.52:140,0,50	1/1:1,0:27:3.01:110,3,0	1/1:3,18:24:8.88:333,9,0	1/1:19,0:19:32.67:357,33,0	0/1:15,0:15:28.65:174,0,29	1/1:30,0:30:78.69:672,79,0	1/1:24,0:24:43.13:427,43,0	1/1:19,0:19:35.98:366,36,0	1/1:23,0:23:0.07:262,0,0	0/1:22,0:22:34.08:150,0,34	1/1:36,0:36:9.41:480,9,0	1/1:1,22:25:6.02:263,6,0	1/1:34,0:34:98.85:1667,99,0	1/1:3,0:43:5.75:124,6,0	1/1:16,0:16:41.93:627,42,0
chr10	89945520	.	CT	C	2433.71	PASS	AB=0.842;AC=12;AF=0.214;AN=56;BaseQRankSum=9.142;DP=776;FS=1.202;HRun=1;HaplotypeScore=188.4076;InbreedingCoeff=0.4005;MQ=58.18;MQ0=13;MQRankSum=7.282;QD=9.70;ReadPosRankSum=8.228;VQSLOD=1.1822;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:48.16:0,48,753	0/0:8,0:8:12.04:0,12,173	0/0:42,0:14:26.90:0,27,342	0/0:48,0:23:32.85:0,33,667	0/1:33,3:36:6.43:297,0,6	0/0:20,0:20:12.04:0,12,177	0/0:24,0:24:41.74:0,42,655	0/0:54,0:53:99:0,163,2425	0/1:14,19:33:5.95:746,0,6	0/0:35,0:35:98.34:0,98,1304	0/0:14,0:14:11.05:0,11,178	0/1:23,5:28:33.17:231,0,33	1/1:25,4:29:32.68:328,33,0	0/1:17,4:21:56.82:142,0,57	0/0:27,0:27:27.09:0,27,401	0/0:28,0:28:42.14:0,42,594	0/0:17,0:17:27.98:0,28,416	0/1:17,2:18:47.16:47,0,75	0/0:30,0:27:78.74:0,79,1218	0/0:28,0:28:60.15:0,60,908	0/0:17,0:17:30.10:0,30,464	1/1:23,2:25:16.14:232,16,0	1/1:20,4:24:29.43:248,29,0	0/1:32,4:36:41.03:331,0,41	0/0:25,0:25:27.09:0,27,384	0/0:36,0:36:99:0,108,1701	0/0:33,0:33:21.07:0,21,312	0/0:18,0:18:48.16:0,48,741
chr10	89945521	.	T	TATC	6956.59	PASS	AB=0.894;AC=20;AF=0.357;AN=56;BaseQRankSum=4.552;DP=777;FS=5.028;HRun=0;HaplotypeScore=193.1557;InbreedingCoeff=0.6163;MQ=58.85;MQ0=13;MQRankSum=2.959;QD=20.28;ReadPosRankSum=11.102;VQSLOD=3.4266;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:48.12:0,48,720	0/0:8,0:8:2.60:0,3,129	0/0:43,0:15:27.07:0,27,349	0/0:49,0:23:2.09:0,2,545	1/1:8,28:37:44.91:814,45,0	0/0:20,0:20:2.09:0,2,128	0/0:24,0:24:38.10:0,38,502	0/0:52,0:51:99:0,147,2194	1/1:25,8:33:83.51:1181,84,0	0/1:36,0:36:39.90:40,0,689	0/0:13,0:13:6.59:0,7,180	1/1:7,21:28:43.93:914,44,0	1/1:8,21:29:47.92:865,48,0	1/1:6,15:22:26.47:453,26,0	0/0:27,0:27:17.60:0,18,358	0/1:28,0:28:10.62:11,0,463	0/0:17,0:17:26.54:0,27,307	0/1:5,14:18:61.05:254,0,61	0/0:30,0:27:74.75:0,75,931	0/0:28,0:28:56.43:0,56,755	0/0:17,0:17:26.75:0,27,300	1/1:3,21:24:35.97:714,36,0	1/1:4,20:24:29.81:529,30,0	1/1:9,28:39:60.01:1178,60,0	0/1:24,0:24:3.56:4,0,293	0/0:36,0:36:99:0,108,1295	0/0:32,0:32:9.55:0,10,262	0/0:18,0:18:48.11:0,48,641
chr10	89945968	.	C	CCTTTT	2108.41	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-4.722;DP=625;FS=0.742;HRun=0;HaplotypeScore=113.8063;InbreedingCoeff=0.9940;MQ=73.67;MQ0=2;MQRankSum=-0.961;QD=43.03;ReadPosRankSum=1.566;VQSLOD=3.7642;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:87.28:0,87,1621	1/1:1,11:13:24.90:649,25,0	0/0:29,0:19:38.81:0,39,539	0/0:39,0:28:26.26:0,26,370	0/0:19,0:19:51.16:0,51,923	0/0:29,0:29:81.26:0,81,1527	0/0:18,0:18:48.16:0,48,939	0/0:40,0:40:87.12:0,87,1399	0/0:24,0:24:66.18:0,66,1172	0/0:24,0:24:63.19:0,63,1176	0/0:13,0:13:33.10:0,33,625	0/0:18,0:18:48.13:0,48,836	0/0:17,0:17:42.13:0,42,793	0/0:8,0:8:21.04:0,21,338	1/1:1,18:20:36.12:1063,36,0	0/0:14,0:14:42.13:0,42,804	1/1:3,13:16:18.06:537,18,0	0/0:17,0:17:48.12:0,48,889	0/0:29,0:29:57.14:0,57,1031	0/0:21,0:21:51.16:0,51,952	0/0:18,0:18:42.14:0,42,816	0/0:17,0:17:45.15:0,45,859	0/0:22,0:22:60.19:0,60,1144	0/0:22,0:22:60.19:0,60,1141	0/0:12,0:12:27.09:0,27,540	0/0:28,0:28:84.26:0,84,1525	0/0:36,0:35:78.19:0,78,1350	0/0:26,0:26:72.19:0,72,1274
chr10	89946250	.	CCTCTCTCTCT	C	817.18	PASS	AB=1.000;AC=11;AF=0.220;AN=50;BaseQRankSum=5.022;DP=602;FS=2.515;HRun=0;HaplotypeScore=174.8390;InbreedingCoeff=0.6300;MQ=69.95;MQ0=13;MQRankSum=-4.402;QD=5.71;ReadPosRankSum=1.064;VQSLOD=2.7420;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:30.10:0,30,1166	./.	./.	./.	0/0:22,0:22:9.03:0,9,362	1/1:7,10:17:9.03:266,9,0	1/1:19,5:23:6.02:129,6,0	0/0:36,0:36:6.10:0,6,16	0/0:19,0:21:15.05:0,15,513	0/0:24,0:23:33.11:0,33,1307	0/0:22,0:22:12.04:0,12,417	0/0:20,0:20:18.11:0,18,580	0/0:10,0:11:21.07:0,21,777	0/0:15,0:15:15.05:0,15,552	0/0:25,0:22:48.15:0,48,1451	0/0:29,0:29:30.09:0,30,1122	0/0:21,0:24:33.33:0,33,813	0/0:17,0:15:16.61:0,17,439	0/0:20,0:19:3.76:0,4,8	0/1:25,0:25:0:0,0,0	0/1:22,0:21:0:0,0,0	0/0:23,0:23:8.96:0,9,311	0/0:23,0:23:21.07:0,21,781	0/0:24,0:24:24.08:0,24,1039	0/0:14,0:14:6.02:0,6,171	0/1:15,0:13:30.77:31,0,61	1/1:14,10:23:9.03:266,9,0	1/1:11,5:15:6.83:262,7,0
chr10	89946413	.	T	TC	7384.51	PASS	AB=0.696;AC=51;AF=0.911;AN=56;BaseQRankSum=-5.951;DP=531;FS=1.516;HRun=9;HaplotypeScore=63.0552;InbreedingCoeff=0.4853;MQ=91.36;MQ0=0;MQRankSum=-7.636;QD=15.23;ReadPosRankSum=5.229;VQSLOD=4.9738;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,26:37:60.15:655,60,0	1/1:2,6:8:12.03:133,12,0	0/0:20,0:21:40.69:0,41,336	0/0:25,0:25:41.92:0,42,360	0/1:9,7:16:27.99:167,0,28	1/1:5,1:20:5.85:47,6,0	1/1:14,0:28:17.58:87,18,0	1/1:12,0:17:5.82:36,6,0	1/1:1,22:23:54.15:597,54,0	1/1:8,12:20:36.08:386,36,0	1/1:7,9:16:21.06:232,21,0	1/1:1,17:18:36.10:397,36,0	1/1:1,13:14:33.09:365,33,0	1/1:4,13:17:33.09:365,33,0	1/1:4,17:21:42.11:465,42,0	1/1:4,16:20:49.68:535,50,0	1/1:6,26:32:49.15:770,49,0	1/1:2,9:11:21.06:232,21,0	1/1:7,1:8:3.16:36,3,0	1/1:5,0:10:2.96:19,3,0	1/1:9,2:29:9.09:49,9,0	1/1:5,10:15:4.04:272,4,0	1/1:5,14:19:27.20:296,27,0	1/1:6,29:35:49.14:762,49,0	1/1:2,14:16:33.09:365,33,0	1/1:11,0:11:8.94:65,9,0	1/1:9,0:20:2.67:14,3,0	1/1:3,1:4:4.25:37,4,0
chr10	89946898	.	A	ATT	437.50	PASS	AB=0.621;AC=3;AF=0.056;AN=54;BaseQRankSum=3.901;DP=229;FS=17.856;HRun=5;HaplotypeScore=40.7286;InbreedingCoeff=0.2491;MQ=81.14;MQ0=3;MQRankSum=-0.148;QD=19.02;ReadPosRankSum=0.456;VQSLOD=0.0302;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:33.11:0,33,487	1/1:2,3:5:1.39:113,1,0	0/0:7,0:6:5.68:0,6,91	0/0:9,0:8:20.98:0,21,228	0/0:3,0:3:9.03:0,9,138	0/0:5,0:5:9.03:0,9,131	0/0:3,0:3:9.03:0,9,137	0/0:35,0:32:82.18:0,82,1158	0/0:6,0:6:18.03:0,18,231	0/0:4,0:4:9.02:0,9,120	0/0:11,0:11:32.89:0,33,451	0/0:6,0:6:18.06:0,18,275	0/0:2,0:2:6.02:0,6,92	0/0:3,0:3:9.01:0,9,116	0/0:3,0:3:8.39:0,8,39	0/0:5,0:5:15.02:0,15,183	0/1:7,11:18:9.37:414,0,9	0/0:10,0:10:30.10:0,30,450	0/0:13,0:12:27.07:0,27,370	0/0:12,0:12:27.06:0,27,360	./.	0/0:3,0:3:9.02:0,9,116	0/0:4,0:4:12.01:0,12,142	0/0:2,0:2:3.01:0,3,46	0/0:13,0:13:39.08:0,39,511	0/0:7,0:7:18.06:0,18,265	0/0:7,0:7:15.05:0,15,218	0/0:19,0:19:54.14:0,54,769
chr10	89946900	.	ATATTATTAT	A	1159.51	PASS	AB=0.700;AC=15;AF=0.375;AN=40;BaseQRankSum=-0.064;DP=221;FS=0.000;HRun=0;HaplotypeScore=68.6538;InbreedingCoeff=0.5628;MQ=73.15;MQ0=3;MQRankSum=-3.426;QD=11.48;ReadPosRankSum=-3.234;VQSLOD=0.8276;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:13:13.51:0,14,253	0/0:2,0:5:12.04:0,12,476	./.	./.	./.	1/1:2,3:5:3.01:82,3,0	1/1:3,0:3:3.01:73,3,0	1/1:27,8:32:23.75:293,24,0	0/0:6,0:6:3:0,3,27	0/0:4,0:4:3.01:0,3,136	0/0:10,0:10:15.05:0,15,660	0/0:6,0:6:3.01:0,3,72	./.	0/0:3,0:3:3.01:0,3,75	./.	0/0:5,0:5:9.03:0,9,393	0/0:8,0:19:45.14:0,45,1570	0/0:10,0:10:21.07:0,21,805	1/1:6,4:9:9:140,9,0	1/1:9,4:13:9.03:186,9,0	./.	./.	./.	0/0:1,0:1:3.01:0,3,135	0/0:12,0:12:21.07:0,21,915	0/1:4,0:7:56.82:140,0,57	1/1:3,5:8:6.02:164,6,0	1/1:16,4:20:7.55:228,8,0
chr10	89946946	.	TATA	T	916.83	PASS	AB=0.972;AC=20;AF=0.357;AN=56;BaseQRankSum=0.050;DP=214;FS=11.031;HRun=0;HaplotypeScore=42.4231;InbreedingCoeff=0.3554;MQ=81.79;MQ0=1;MQRankSum=0.225;QD=12.22;ReadPosRankSum=0.130;VQSLOD=1.6273;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:29.80:30,0,60	0/0:5,0:5:15.03:0,15,204	0/0:4,0:4:8.92:0,9,67	0/0:12,0:11:10.27:0,10,144	1/1:3,0:3:9:80,9,0	0/0:5,0:5:3.89:0,4,44	0/0:3,0:3:8.99:0,9,75	0/0:31,0:29:70.60:0,71,609	1/1:1,0:1:3:27,3,0	0/1:8,0:8:4.07:179,0,4	0/1:8,0:8:60.11:60,0,112	1/1:0,3:3:3.01:50,3,0	1/1:5,0:5:15:134,15,0	1/1:0,3:3:3.01:50,3,0	0/0:2,0:2:5.99:0,6,50	0/0:3,0:3:9.02:0,9,90	0/0:21,0:21:62.95:0,63,806	0/1:8,2:10:99:148,0,127	0/0:12,0:12:26.64:0,27,238	0/0:7,0:7:17.56:0,18,119	0/0:3,0:3:8.99:0,9,74	1/1:5,0:5:15.02:139,15,0	1/1:3,0:3:9:81,9,0	0/1:2,0:2:19.97:20,0,24	0/1:12,0:12:97.82:98,0,153	0/0:4,0:4:4.22:0,4,41	0/0:12,0:12:19.24:0,19,174	0/0:14,0:14:29.74:0,30,259
chr10	89947391	.	GTTTTT	G	6061.59	PASS	AB=0.844;AC=31;AF=0.554;AN=56;BaseQRankSum=12.629;DP=524;FS=2.849;HRun=15;HaplotypeScore=144.9411;InbreedingCoeff=0.6524;MQ=56.31;MQ0=3;MQRankSum=-11.596;QD=17.57;ReadPosRankSum=5.401;VQSLOD=1.7106;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:24:57.55:131,0,58	1/1:8,0:8:17.97:153,18,0	0/0:14,0:8:10.69:0,11,195	0/0:13,0:9:9.19:0,9,219	1/1:11,16:28:27.57:648,28,0	0/0:6,0:20:48.06:0,48,655	0/0:7,0:15:33.06:0,33,441	0/0:15,0:26:42.12:0,42,601	1/1:7,6:12:16.52:266,17,0	1/1:12,13:24:41.11:627,41,0	1/1:10,11:23:36.63:631,37,0	1/1:5,12:18:32.15:488,32,0	1/1:7,6:13:19.91:312,20,0	0/1:9,4:14:1.41:146,0,1	1/1:23,0:23:23.18:191,23,0	1/1:12,15:27:28.29:566,28,0	0/1:21,0:21:4.46:87,0,4	0/1:7,2:9:35.14:160,0,35	0/0:5,0:16:48.08:0,48,674	0/0:10,0:21:51.03:0,51,704	0/0:4,0:13:27.09:0,27,505	1/1:10,10:20:35.74:450,36,0	1/1:8,9:17:5.57:362,6,0	1/1:9,9:18:20.75:230,21,0	1/1:7,11:19:47.84:578,48,0	0/1:12,1:23:35.44:35,0,572	0/0:11,0:23:51.11:0,51,832	0/0:4,0:17:39.13:0,39,669
chr10	89947399	.	TTTTTTTTG	T	4681.66	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=13.753;DP=562;FS=3.865;HRun=0;HaplotypeScore=185.4004;InbreedingCoeff=0.4932;MQ=54.59;MQ0=4;MQRankSum=-12.777;QD=14.10;ReadPosRankSum=9.247;VQSLOD=2.1617;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:26:12.42:281,12,0	1/1:1,5:6:18.06:413,18,0	0/0:21,0:9:23.21:0,23,334	0/0:20,0:10:6.88:0,7,365	0/1:29,0:29:22.59:365,0,23	0/0:19,0:19:46.02:0,46,1236	0/0:14,0:14:33.05:0,33,651	0/0:27,0:27:59.99:0,60,1259	1/1:14,0:13:7.60:152,8,0	0/1:25,0:24:7.54:319,0,8	1/1:24,0:24:27.30:435,27,0	1/1:18,0:18:32.54:338,33,0	0/1:15,0:15:4.71:161,0,5	0/1:14,0:14:18.91:116,0,19	1/1:5,14:19:23.17:527,23,0	0/1:28,0:28:10.53:277,0,11	1/1:5,16:21:15.04:296,15,0	0/1:10,0:10:57.22:82,0,57	0/0:20,0:20:56.79:0,57,1086	0/0:19,0:19:43.01:0,43,1067	0/0:14,0:14:30.10:0,30,830	1/1:21,0:21:31.73:282,32,0	0/1:21,0:21:13.31:202,0,13	1/1:19,0:19:6.12:130,6,0	1/1:21,0:21:21.19:304,21,0	0/0:26,0:25:31.63:0,32,1310	0/0:30,0:29:69.18:0,69,1836	0/0:20,0:20:47.34:0,47,1227
chr10	89947400	.	TTTTTTTG	T	6692.36	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=12.787;DP=554;FS=8.160;HRun=0;HaplotypeScore=166.5777;InbreedingCoeff=0.7813;MQ=54.79;MQ0=4;MQRankSum=-12.848;QD=20.40;ReadPosRankSum=6.226;VQSLOD=3.1614;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,20:26:33.81:532,34,0	1/1:6,0:6:18.06:305,18,0	0/0:21,0:9:18.03:0,18,245	0/0:21,0:11:15.43:0,15,348	1/1:30,0:30:19.60:650,20,0	0/0:19,0:19:42.62:0,43,1013	0/0:13,0:13:24.01:0,24,431	0/0:25,0:25:55.83:0,56,1010	1/1:14,0:13:12.54:252,13,0	1/1:25,0:24:13.37:505,13,0	1/1:23,0:23:33.85:706,34,0	1/1:20,0:20:32.75:514,33,0	1/1:15,0:15:15.64:291,16,0	0/1:13,0:13:11.97:198,0,12	1/1:17,0:17:23.34:412,23,0	1/1:28,0:28:15.59:498,16,0	1/1:21,0:21:14.08:208,14,0	0/1:10,0:10:33.91:137,0,34	0/0:20,0:20:17.51:0,18,737	0/0:19,0:19:34.88:0,35,869	0/0:13,0:13:30.03:0,30,662	1/1:19,0:19:43.31:457,43,0	0/1:21,0:21:2.51:318,0,3	1/1:18,0:18:21.84:228,22,0	1/1:21,0:21:29.29:484,29,0	0/0:25,0:24:7.80:0,8,1041	0/0:31,0:30:72.14:0,72,1525	0/0:19,0:19:49.24:0,49,979
chr10	89947401	.	TTTTTTG	T	9593.56	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=10.998;DP=555;FS=7.711;HRun=0;HaplotypeScore=147.6647;InbreedingCoeff=0.7777;MQ=54.97;MQ0=4;MQRankSum=-12.051;QD=25.58;ReadPosRankSum=4.799;VQSLOD=3.6790;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,2:26:32.72:422,33,0	1/1:6,0:6:18.06:269,18,0	0/1:21,0:9:5.65:6,0,206	0/0:21,0:11:13.08:0,13,246	1/1:30,0:30:65.87:1021,66,0	0/0:19,0:19:42.14:0,42,834	0/0:13,0:13:24.08:0,24,391	0/0:23,0:23:60.06:0,60,925	1/1:15,0:14:26.92:445,27,0	1/1:25,0:24:50.92:847,51,0	1/1:23,0:23:62.97:1027,63,0	1/1:21,0:21:41.76:775,42,0	1/1:16,0:16:32.59:508,33,0	1/1:8,5:13:17.51:289,18,0	1/1:17,0:17:23.34:353,23,0	1/1:28,0:28:50.05:801,50,0	1/1:21,0:21:12.04:179,12,0	0/1:10,0:10:22.43:219,0,22	0/0:20,0:20:42.90:0,43,686	0/0:20,0:20:42.11:0,42,742	0/0:13,0:13:30.10:0,30,581	1/1:19,0:19:47.55:704,48,0	1/1:20,0:20:32.47:559,32,0	1/1:18,0:18:26.69:376,27,0	1/1:21,0:21:47.89:768,48,0	0/1:24,0:23:26.06:26,0,832	0/0:32,0:32:78.14:0,78,1330	0/0:19,0:19:49.26:0,49,876
chr10	89947405	.	TTGTTTTTG	T	2919.83	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=13.897;DP=550;FS=6.454;HRun=0;HaplotypeScore=185.4967;InbreedingCoeff=0.1419;MQ=55.44;MQ0=3;MQRankSum=-13.534;QD=8.39;ReadPosRankSum=10.458;VQSLOD=0.4553;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:20.75:252,21,0	1/1:6,0:6:18.06:311,18,0	0/0:23,0:11:27.30:0,27,410	0/1:21,0:12:18.79:19,0,431	0/1:30,0:30:78.05:221,0,78	0/0:18,0:18:40.83:0,41,1225	0/0:9,0:9:24.05:0,24,527	0/0:25,0:25:69.73:0,70,1427	0/1:16,0:15:26.38:88,0,26	0/1:24,0:23:99:175,0,106	0/1:23,0:23:34.57:256,0,35	1/1:22,0:22:12.62:224,13,0	0/1:17,0:17:6.12:113,0,6	0/1:12,0:12:38.16:77,0,38	1/1:15,2:17:23.42:466,23,0	0/1:26,0:26:61.06:162,0,61	1/1:19,2:21:17.16:244,17,0	0/1:10,0:10:26.70:27,0,55	0/0:19,0:19:23.83:0,24,856	0/0:21,0:21:34.48:0,34,1212	0/0:14,0:14:33.08:0,33,796	0/1:19,0:19:12.49:131,0,12	0/1:19,0:19:44:117,0,44	0/1:18,0:18:10.71:57,0,11	1/1:22,0:22:15.31:172,15,0	0/0:21,0:20:39.51:0,40,1369	0/0:33,0:33:84.26:0,84,2042	0/0:19,0:19:40.26:0,40,1186
chr10	89947407	.	GT	G	5087.81	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=12.880;DP=533;FS=13.311;HRun=15;HaplotypeScore=116.5836;InbreedingCoeff=0.7936;MQ=54.22;MQ0=3;MQRankSum=-11.969;QD=14.05;ReadPosRankSum=5.679;VQSLOD=3.8630;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:16.92:55,17,0	1/1:6,0:6:12.22:37,12,0	0/1:22,0:10:0.36:0,0,188	0/1:21,0:11:15.67:16,0,171	1/1:3,26:29:71.86:670,72,0	0/0:17,0:17:44.99:0,45,476	0/0:9,0:9:23.97:0,24,240	0/0:25,0:25:69.10:0,69,818	1/1:1,15:15:27.01:254,27,0	1/1:2,19:20:54.07:517,54,0	1/1:3,20:23:63.01:579,63,0	1/1:1,21:22:41.95:356,42,0	1/1:3,15:18:32.16:259,32,0	1/1:6,5:11:17.22:142,17,0	1/1:17,0:17:16.96:64,17,0	1/1:2,23:25:52.15:466,52,0	0/1:21,0:21:6.63:18,0,7	1/1:1,9:10:18.01:191,18,0	0/0:16,0:16:42.96:0,43,492	0/0:18,0:18:38.94:0,39,526	0/0:14,0:14:32.87:0,33,322	1/1:0,19:19:48.05:461,48,0	1/1:3,16:19:32.87:294,33,0	1/1:1,16:17:26.86:262,27,0	1/1:0,20:20:48.04:447,48,0	0/0:19,1:19:4.23:0,4,537	0/0:33,0:33:44.81:0,45,813	0/0:19,0:19:49.57:0,50,515
chr10	89948630	.	TG	T	1924.45	PASS	AB=0.950;AC=25;AF=0.463;AN=54;BaseQRankSum=0.638;DP=392;FS=0.509;HRun=11;HaplotypeScore=57.1796;InbreedingCoeff=0.4285;MQ=84.76;MQ0=4;MQRankSum=-1.168;QD=8.12;ReadPosRankSum=2.235;VQSLOD=1.9637;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:15:3.47:0,3,26	0/0:6,0:6:12.01:0,12,119	0/0:23,0:19:20.77:0,21,232	0/0:24,0:19:12.34:0,12,146	0/0:5,0:5:5.90:0,6,64	1/1:2,8:10:23.94:193,24,0	1/1:7,14:24:54.03:411,54,0	1/1:14,8:24:25.89:195,26,0	0/0:14,2:16:5.41:0,5,248	./.	0/1:4,0:4:15.56:16,0,55	0/0:16,0:16:18.48:0,18,171	0/0:8,0:8:12:0,12,112	0/1:14,0:14:2.90:3,0,113	0/0:23,1:24:20.50:0,21,404	0/1:14,1:15:36.62:37,0,217	0/1:22,1:23:17.26:17,0,237	0/1:13,2:15:41.60:42,0,185	1/1:7,10:17:26.90:221,27,0	1/1:1,2:3:5.99:49,6,0	1/1:12,15:28:34.29:278,34,0	0/1:6,1:7:10.34:10,0,88	0/0:2,0:2:3.01:0,3,32	0/1:9,0:9:2.63:3,0,113	0/0:11,0:11:18.01:0,18,171	1/1:8,6:15:25.97:199,26,0	1/1:4,9:16:27.02:189,27,0	1/1:2,11:13:31.99:252,32,0
chr10	89950133	.	GA	G	7139.93	PASS	AB=0.655;AC=49;AF=0.875;AN=56;BaseQRankSum=0.707;DP=635;FS=8.922;HRun=13;HaplotypeScore=79.1408;InbreedingCoeff=0.1287;MQ=69.76;MQ0=2;MQRankSum=0.418;QD=11.84;ReadPosRankSum=6.868;VQSLOD=3.9725;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,32:47:40:537,40,0	1/1:1,6:7:17.87:131,18,0	0/0:30,2:21:0.28:0,0,107	0/1:25,0:19:3.49:3,0,73	1/1:3,16:22:7.61:201,8,0	1/1:7,19:27:14.57:297,15,0	1/1:3,16:20:49.75:356,50,0	1/1:6,20:27:51.30:422,51,0	1/1:7,14:23:53.82:367,54,0	1/1:8,26:35:76.49:547,76,0	0/1:3,18:21:16:160,0,16	1/1:7,18:27:19.67:289,20,0	0/1:3,10:14:11.15:149,0,11	1/1:5,15:21:34.82:247,35,0	1/1:5,11:16:26.83:197,27,0	1/1:2,15:17:18.54:298,19,0	1/1:7,24:31:37.35:491,37,0	0/1:3,12:18:13.46:214,0,13	1/1:7,13:21:23.93:265,24,0	1/1:8,8:16:23.73:173,24,0	1/1:5,15:23:25.81:280,26,0	1/1:7,8:17:10.90:171,11,0	0/1:10,14:24:12.84:162,0,13	1/1:4,14:23:39.98:249,40,0	1/1:3,16:19:29.81:219,30,0	1/1:5,12:18:28.77:202,29,0	1/1:4,21:29:18.68:273,19,0	1/1:2,11:13:32.78:241,33,0
chr10	89951078	.	GAGGGGGAGA	G	904.02	PASS	AB=1.000;AC=5;AF=0.096;AN=52;BaseQRankSum=4.748;DP=194;FS=12.654;HRun=0;HaplotypeScore=63.1711;InbreedingCoeff=0.4817;MQ=98.57;MQ0=6;MQRankSum=-2.147;QD=25.11;ReadPosRankSum=1.581;VQSLOD=1.5467;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,9:32:39.70:946,40,0	./.	0/0:23,0:17:17.66:0,18,278	0/0:26,0:16:15.20:0,15,119	0/0:6,0:6:15.03:0,15,186	0/0:5,0:5:9:0,9,146	0/0:5,0:4:9.01:0,9,104	0/0:10,0:10:11.78:0,12,119	0/0:7,0:6:14.89:0,15,192	0/0:5,0:5:9.03:0,9,245	0/0:4,0:4:9.01:0,9,184	0/0:8,0:8:21:0,21,236	0/0:4,0:4:9:0,9,80	0/0:5,0:5:9:0,9,103	0/0:5,0:5:14.99:0,15,158	0/0:3,0:3:6.02:0,6,197	0/0:8,0:8:18.01:0,18,219	0/0:1,0:1:3:0,3,26	0/0:3,0:2:3:0,3,25	0/1:2,0:2:0:0,0,0	0/0:9,0:9:12:0,12,104	1/1:2,0:2:3.01:64,3,0	./.	0/0:8,0:8:17.93:0,18,278	0/0:3,0:3:9.02:0,9,136	0/0:5,0:5:12.03:0,12,191	0/0:3,0:3:6.02:0,6,218	0/0:2,0:2:3.01:0,3,52
chr10	89952384	.	T	TTATGTG	10411.54	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.608;DP=554;FS=0.000;HRun=0;HaplotypeScore=142.3915;InbreedingCoeff=0.6573;MQ=63.81;MQ0=15;MQRankSum=-1.631;QD=21.34;ReadPosRankSum=3.655;VQSLOD=4.5355;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:32:99:257,0,108	1/1:6,0:6:8.86:60,9,0	0/0:33,0:19:49.81:0,50,427	0/0:33,0:21:41.86:0,42,400	1/1:16,0:18:29.97:294,30,0	1/1:25,0:25:26.71:251,27,0	1/1:26,0:25:47.11:507,47,0	1/1:29,0:27:75.42:673,75,0	1/1:13,1:14:15:228,15,0	1/1:19,0:17:39.89:431,40,0	1/1:2,0:11:5.93:73,6,0	1/1:16,0:18:38.86:575,39,0	1/1:18,1:21:51.32:716,51,0	1/1:1,14:20:9.03:296,9,0	1/1:16,0:16:33:455,33,0	1/1:3,18:27:26.86:735,27,0	1/1:23,0:23:44.42:493,44,0	1/1:12,0:13:23.60:229,24,0	1/1:18,0:18:53.99:610,54,0	1/1:14,0:14:26.66:285,27,0	1/1:21,0:20:38.91:382,39,0	1/1:9,0:8:14.78:174,15,0	1/1:2,0:10:5.69:87,6,0	1/1:18,0:18:29.62:389,30,0	1/1:11,1:14:21.05:420,21,0	1/1:25,0:25:75:1068,75,0	1/1:9,0:23:13.74:490,14,0	1/1:8,0:8:20.95:234,21,0
chr10	89952483	.	GTGGCTA	G	10524.50	PASS	AB=0.947;AC=27;AF=0.482;AN=56;BaseQRankSum=7.999;DP=493;FS=2.108;HRun=0;HaplotypeScore=122.2987;InbreedingCoeff=0.9212;MQ=88.43;MQ0=0;MQRankSum=-15.488;QD=48.72;ReadPosRankSum=5.538;VQSLOD=4.8803;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:87.30:0,87,2949	0/0:7,0:7:21.07:0,21,769	0/0:21,0:21:63.22:0,63,2091	0/0:24,0:24:70.61:0,71,2146	1/1:0,18:18:26.79:591,27,0	0/0:15,0:15:45.09:0,45,1515	0/0:24,0:24:69.22:0,69,2318	0/0:22,0:22:63.20:0,63,2008	1/1:0,20:20:42.14:1017,42,0	1/1:0,20:20:57.18:1380,57,0	1/1:0,13:13:27.09:571,27,0	1/1:0,20:21:54.12:1303,54,0	1/1:0,17:17:42.14:999,42,0	1/1:0,12:12:21.07:498,21,0	0/0:26,0:26:78.27:0,78,2865	1/1:0,23:23:50.74:1187,51,0	0/0:28,0:28:84.29:0,84,3034	1/1:0,8:8:14.98:325,15,0	0/0:13,0:13:39.13:0,39,1401	0/0:12,0:12:27.08:0,27,796	0/0:25,0:25:69.24:0,69,2441	1/1:0,16:16:48.16:1184,48,0	1/1:0,7:7:15.05:264,15,0	1/1:0,10:10:21.07:496,21,0	1/1:0,13:13:30.05:689,30,0	0/1:17,1:18:22.49:22,0,1700	0/0:20,0:20:60.16:0,60,2157	0/0:6,0:6:18.06:0,18,604
chr10	89953303	.	GAC	G	11671.18	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=15.670;DP=805;FS=6.365;HRun=0;HaplotypeScore=103.2853;InbreedingCoeff=0.9997;MQ=64.73;MQ0=4;MQRankSum=0.860;QD=28.54;ReadPosRankSum=5.973;VQSLOD=6.3393;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,46:53:99:1351,105,0	0/0:8,0:8:24.08:0,24,404	0/0:27,0:15:40.05:0,40,517	0/0:33,0:23:46.76:0,47,628	1/1:1,23:24:54.13:694,54,0	0/0:25,0:25:69.22:0,69,1125	0/0:27,0:27:63.22:0,63,1059	0/0:37,0:37:96.32:0,96,1595	1/1:7,27:33:66.21:849,66,0	1/1:4,31:36:96.23:1214,96,0	1/1:1,17:18:38.97:502,39,0	1/1:4,28:32:66.21:849,66,0	1/1:5,29:33:69.22:887,69,0	1/1:2,23:25:66.21:849,66,0	0/0:25,0:25:60.21:0,60,1009	1/1:6,25:31:68.62:887,69,0	0/0:33,0:33:96.29:0,96,1556	1/1:3,18:21:39.13:502,39,0	0/0:26,0:26:72.22:0,72,1120	0/0:24,0:24:63.22:0,63,1055	0/0:50,0:50:99:0,132,2193	1/1:3,19:22:48.16:617,48,0	1/1:2,14:16:38.80:501,39,0	1/1:2,43:45:99:1467,114,0	1/1:3,14:17:39.13:502,39,0	0/0:38,0:38:99:0,105,1761	0/0:28,0:28:75.26:0,75,1265	0/0:15,0:15:42.12:0,42,680
chr10	89953789	.	CAT	C	9781.25	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=10.703;DP=513;FS=1.310;HRun=0;HaplotypeScore=90.4919;InbreedingCoeff=0.9880;MQ=78.89;MQ0=0;MQRankSum=-1.111;QD=42.16;ReadPosRankSum=5.696;VQSLOD=6.3516;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:99:1607,105,0	0/0:7,0:7:21.07:0,21,406	0/0:11,0:11:30.10:0,30,528	0/0:24,0:24:64.41:0,64,1138	1/1:0,14:14:39.13:596,39,0	0/0:13,0:13:39.13:0,39,734	0/0:23,0:23:69.24:0,69,1264	0/0:28,0:28:84.29:0,84,1587	1/1:1,15:16:42.14:643,42,0	1/1:0,12:12:36.12:551,36,0	1/1:0,8:8:21.07:321,21,0	1/1:0,23:23:60.20:918,60,0	1/1:0,14:14:39.13:597,39,0	1/1:0,16:16:48.16:735,48,0	0/0:28,0:28:84.29:0,84,1614	1/1:0,24:24:60.20:919,60,0	0/0:22,0:22:66.23:0,66,1262	1/1:0,7:7:21.07:321,21,0	0/0:9,0:10:30.09:0,30,548	0/0:16,0:16:48.16:0,48,917	0/0:48,0:47:99:0,141,2639	1/1:0,4:4:9.03:137,9,0	1/1:0,9:9:18.05:276,18,0	1/1:0,31:31:87.30:1332,87,0	1/1:0,18:18:54.18:827,54,0	0/0:22,0:22:63.22:0,63,1212	0/0:23,0:23:69.24:0,69,1333	0/0:6,0:6:18.06:0,18,348
chr10	89954020	.	GT	G	983.98	PASS	AB=0.786;AC=15;AF=0.268;AN=56;BaseQRankSum=-1.981;DP=543;FS=16.363;HRun=16;HaplotypeScore=64.5397;InbreedingCoeff=0.3550;MQ=62.62;MQ0=10;MQRankSum=0.293;QD=3.76;ReadPosRankSum=3.299;VQSLOD=-0.5754;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:33:25.89:74,26,0	0/0:4,0:4:8.98:0,9,73	0/0:25,0:5:0.79:0,1,13	0/0:24,0:10:6.12:0,6,35	0/0:16,0:27:29.05:0,29,170	0/1:17,8:26:9.88:150,0,10	1/1:8,10:19:16.57:95,17,0	0/1:23,12:36:39.67:130,0,40	0/0:7,0:16:2.84:0,3,14	0/0:11,0:26:53.86:0,54,333	0/0:4,0:18:23.26:0,23,136	0/0:9,0:22:11.30:0,11,59	0/0:14,0:14:25.65:0,26,131	0/0:12,0:13:16.39:0,16,87	0/1:12,0:15:0.15:0,0,98	0/0:13,1:14:10.25:0,10,97	0/0:15,1:15:11.88:0,12,196	0/0:14,0:13:17.75:0,18,126	0/1:16,8:22:32.69:88,0,33	1/1:13,6:20:16.02:95,16,0	0/1:7,6:13:7.08:57,0,7	0/0:2,0:8:17.06:0,17,90	0/0:3,0:11:15.72:0,16,89	0/0:4,0:12:10.50:0,10,58	0/0:14,0:16:20.35:0,20,105	0/1:17,13:29:15.95:181,0,16	0/1:29,5:34:4.85:159,0,5	1/1:5,7:12:20.50:126,20,0
chr10	89954427	.	AGCT	A	3195.88	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=16.884;DP=608;FS=50.187;HRun=0;HaplotypeScore=111.9974;InbreedingCoeff=-0.6335;MQ=68.91;MQ0=13;MQRankSum=-2.090;QD=6.48;ReadPosRankSum=7.990;VQSLOD=0.0999;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:13.70:522,14,0	0/0:7,0:7:0.75:0,1,195	0/0:32,0:22:59.09:0,59,712	0/0:30,0:18:35.04:0,35,580	0/1:23,0:23:80.06:80,0,249	0/1:16,0:16:50.28:143,0,50	0/1:24,0:24:99:116,0,150	0/1:20,0:19:59.52:60,0,266	0/1:21,0:21:99:136,0,117	0/1:24,0:24:99:158,0,179	0/1:15,0:15:50.03:50,0,120	0/1:23,0:23:65.93:211,0,66	0/1:22,0:21:70.28:194,0,70	0/1:24,0:21:58.93:191,0,59	0/0:16,0:16:42.10:0,42,830	0/1:21,0:20:72.41:168,0,72	0/0:28,0:28:81.16:0,81,1496	0/1:27,0:25:87.97:199,0,88	0/1:15,0:15:23.32:23,0,179	0/1:25,0:25:75.69:76,0,222	0/1:34,0:32:99:221,0,172	0/1:16,0:16:65.58:66,0,179	0/1:14,0:14:72.84:73,0,88	0/1:17,0:17:55.71:160,0,56	0/1:23,0:23:99:144,0,139	0/1:29,0:29:99:138,0,262	0/1:22,0:21:97.77:152,0,98	0/1:10,0:10:63.38:75,0,63
chr10	89954429	.	CTGG	C	9824.42	PASS	AB=0.830;AC=45;AF=0.804;AN=56;BaseQRankSum=5.364;DP=602;FS=16.642;HRun=0;HaplotypeScore=91.4863;InbreedingCoeff=0.6595;MQ=68.84;MQ0=15;MQRankSum=-1.091;QD=20.05;ReadPosRankSum=0.950;VQSLOD=3.3565;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:6.16:256,0,6	0/1:6,1:7:33.12:33,0,96	0/0:34,0:22:12.03:0,12,132	0/0:34,0:18:18.05:0,18,220	1/1:10,12:22:24.08:337,24,0	1/1:5,11:16:36.09:485,36,0	0/1:9,15:24:11.47:388,0,11	1/1:12,8:19:24.06:308,24,0	1/1:6,15:21:33.11:464,33,0	1/1:10,14:24:45.15:627,45,0	1/1:8,6:14:12.04:169,12,0	1/1:5,18:23:45.15:632,45,0	1/1:6,14:19:42.13:574,42,0	1/1:8,16:21:42.14:590,42,0	0/0:14,0:14:33.10:0,33,625	1/1:7,14:20:39.12:532,39,0	0/0:28,0:28:56.41:0,56,1070	1/1:8,19:25:42.09:590,42,0	1/1:9,4:13:15.02:189,15,0	1/1:13,9:23:18.53:248,19,0	1/1:13,22:33:48.16:674,48,0	1/1:11,5:16:18.06:253,18,0	1/1:6,8:14:18.04:253,18,0	1/1:4,12:16:33.11:464,33,0	1/1:9,12:21:30.10:422,30,0	1/1:14,15:29:45.15:621,45,0	1/1:7,15:22:32.94:464,33,0	1/1:4,6:10:18.06:253,18,0
chr10	89954449	.	GGT	G	347.45	PASS	AB=0.987;AC=23;AF=0.411;AN=56;BaseQRankSum=12.287;DP=586;FS=3.188;HRun=0;HaplotypeScore=115.3228;InbreedingCoeff=-0.2734;MQ=64.30;MQ0=21;MQRankSum=-1.785;QD=0.91;ReadPosRankSum=12.903;VQSLOD=-0.3020;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:38.09:0,38,266	0/0:3,0:3:2.88:0,3,99	0/0:51,0:19:33.47:0,33,368	0/0:53,0:20:36.74:0,37,389	0/1:16,0:16:16.72:17,0,83	1/1:13,0:13:22.83:69,23,0	0/1:22,0:22:13.30:13,0,202	0/0:24,0:23:24.70:0,25,449	0/1:20,0:20:19.48:19,0,149	0/1:21,1:22:32.70:33,0,112	0/1:10,0:10:3.52:4,0,81	0/1:25,0:25:26.15:26,0,211	0/1:19,1:20:41.18:41,0,76	0/1:26,0:23:26.17:26,0,179	0/0:13,0:13:39.13:0,39,701	0/1:21,0:21:31.02:31,0,133	0/0:26,0:26:71.73:0,72,1262	0/1:26,0:24:28.06:28,0,146	0/0:11,0:10:2.47:0,2,144	0/1:17,1:18:7.47:7,0,92	0/1:37,0:35:29.30:29,0,178	1/1:11,1:12:11.12:31,11,0	1/1:10,0:10:11.12:31,11,0	0/1:17,0:17:28.52:29,0,48	0/1:15,0:15:22.64:23,0,84	0/1:24,0:24:16.81:17,0,249	0/1:20,0:19:25.84:26,0,82	0/1:7,0:7:15.84:16,0,23
chr10	89954782	.	GCACACACACTCA	G	929.68	PASS	AB=1.000;AC=18;AF=0.333;AN=54;BaseQRankSum=-1.215;DP=830;FS=2.534;HRun=0;HaplotypeScore=309.0706;InbreedingCoeff=-0.0788;MQ=53.45;MQ0=10;MQRankSum=1.399;QD=2.35;ReadPosRankSum=2.572;VQSLOD=2.0365;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:25:3.18:71,3,0	0/0:7,0:7:18.06:0,18,829	./.	0/0:29,0:12:3.01:0,3,35	0/1:23,0:23:22.99:23,0,1114	0/1:15,0:15:32.92:33,0,43	0/1:31,0:31:22.46:22,0,298	0/0:41,0:39:57.43:0,57,590	0/1:37,0:36:17.58:18,0,1920	0/1:29,0:29:6.94:7,0,594	0/0:16,0:16:14.98:0,15,419	1/1:16,21:37:11.74:341,12,0	0/1:41,0:41:59.13:59,0,1752	0/0:43,0:43:14.40:0,14,2211	0/0:44,0:44:90.29:0,90,3561	0/1:34,0:34:1.55:2,0,1737	0/0:39,0:39:84.20:0,84,3483	0/1:38,0:38:61.97:62,0,2137	0/1:23,0:19:94.68:95,0,95	0/0:23,0:23:15:0,15,196	0/0:71,0:68:1.16:0,1,447	0/0:26,0:26:50.22:0,50,1955	0/1:13,0:13:25.11:25,0,346	0/0:53,0:53:2.39:0,2,3262	0/1:27,0:27:52:52,0,1374	0/1:19,0:19:1.37:231,0,1	0/0:12,0:12:6.02:0,6,84	1/1:2,0:2:3.01:42,3,0
chr10	89954806	.	ACACACACACT	A	3744.63	PASS	AB=0.997;AC=25;AF=0.446;AN=56;BaseQRankSum=-7.501;DP=806;FS=4.377;HRun=0;HaplotypeScore=268.9339;InbreedingCoeff=0.2714;MQ=51.90;MQ0=21;MQRankSum=-2.043;QD=7.88;ReadPosRankSum=-9.200;VQSLOD=0.2107;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:23:11.49:59,0,11	0/0:8,0:8:24.06:0,24,841	0/0:20,0:4:6.02:0,6,78	0/0:33,0:9:14.94:0,15,198	0/1:25,0:25:58.71:59,0,1083	1/1:9,3:12:11.84:193,12,0	1/1:33,3:36:27.68:564,28,0	1/1:35,0:31:10.15:783,10,0	0/1:39,0:38:50.36:50,0,1848	0/0:20,0:20:19.40:0,19,697	0/1:13,0:13:24.43:24,0,460	0/1:32,0:32:94.43:164,0,94	0/0:38,0:37:65.78:0,66,1861	0/1:41,0:41:36.54:37,0,2230	0/0:47,0:47:99:0,108,3568	0/1:35,0:35:9.46:9,0,1683	0/0:45,0:45:99:0,118,3667	0/1:37,0:37:83.96:84,0,1853	1/1:16,2:12:15.02:344,15,0	1/1:10,12:22:3.05:25,3,0	0/1:72,2:65:8.98:402,0,9	0/0:27,0:27:8.33:0,8,1726	0/0:12,0:12:13.59:0,14,501	0/0:55,0:54:36.05:0,36,3296	0/0:26,0:26:34.22:0,34,1351	1/1:15,3:16:26.25:713,26,0	1/1:7,1:8:6.02:90,6,0	1/1:5,1:4:6.02:144,6,0
chr10	89954816	.	T	TCA	6375.38	PASS	AB=0.877;AC=38;AF=0.679;AN=56;BaseQRankSum=8.500;DP=803;FS=4.394;HRun=0;HaplotypeScore=173.0653;InbreedingCoeff=0.4475;MQ=52.92;MQ0=24;MQRankSum=1.938;QD=10.49;ReadPosRankSum=1.743;VQSLOD=4.7482;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,2:23:15.48:223,15,0	0/0:8,0:8:21.07:0,21,273	0/0:21,0:4:9.03:0,9,115	0/0:39,0:12:23.80:0,24,226	1/1:23,0:23:45.81:296,46,0	0/1:11,2:13:36.02:84,0,36	0/1:29,10:39:35.90:374,0,36	0/1:41,4:37:99:457,0,241	1/1:36,0:34:76.31:385,76,0	1/1:18,0:18:40.08:341,40,0	1/1:12,0:12:29.65:163,30,0	0/0:33,0:33:33.07:0,33,375	1/1:35,0:34:81.38:453,81,0	1/1:37,0:37:78.46:399,78,0	0/0:46,0:46:99:0,114,1431	1/1:30,0:30:32.27:280,32,0	0/0:47,0:48:99:0,129,1655	1/1:37,0:37:80.56:479,81,0	0/1:15,1:13:32.05:124,0,32	1/1:19,2:21:2.66:47,3,0	0/1:58,13:63:81.93:261,0,82	1/1:26,0:26:58.57:376,59,0	1/1:11,0:11:21.59:121,22,0	1/1:58,0:57:99:767,135,0	1/1:27,0:27:60.03:358,60,0	0/1:15,2:15:12.69:233,0,13	1/1:5,1:6:6.02:90,6,0	1/1:4,2:4:5.81:63,6,0
chr10	89954870	.	TCA	T	5117.96	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=7.737;DP=870;FS=6.377;HRun=0;HaplotypeScore=167.6432;InbreedingCoeff=0.9969;MQ=53.72;MQ0=17;MQRankSum=0.196;QD=18.28;ReadPosRankSum=1.242;VQSLOD=4.3884;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:35:38.78:497,39,0	0/0:11,0:11:30.07:0,30,484	0/0:47,0:19:44.97:0,45,640	0/0:49,0:32:69.18:0,69,1032	0/0:19,0:19:48.15:0,48,796	1/1:2,11:13:21.07:279,21,0	1/1:7,26:33:39.13:519,39,0	1/1:11,21:29:57.13:695,57,0	0/0:34,0:34:90.27:0,90,1454	0/0:38,0:37:99:0,99,1702	0/0:14,0:13:36.12:0,36,619	0/0:39,0:39:78.25:0,78,1304	0/0:27,0:27:75.26:0,75,1268	0/0:29,0:29:69.24:0,69,1181	0/0:40,0:40:99:0,108,1807	0/0:32,0:32:90.31:0,90,1534	0/0:51,0:51:99:0,132,2216	0/0:31,0:31:72.61:0,73,1136	1/1:2,8:10:24.07:294,24,0	1/1:6,15:21:21.06:280,21,0	1/1:8,91:97:99:1479,112,0	0/0:25,0:25:66.19:0,66,1076	0/0:17,0:17:45.15:0,45,760	0/0:63,0:63:99:0,154,2658	0/0:24,0:24:56.77:0,57,950	1/1:2,14:16:39.13:519,39,0	1/1:1,13:14:24.08:316,24,0	1/1:1,6:7:18.06:239,18,0
chr10	89957070	.	G	GT	5729.23	PASS	AB=0.972;AC=47;AF=0.839;AN=56;BaseQRankSum=-0.550;DP=508;FS=2.931;HRun=8;HaplotypeScore=172.9815;InbreedingCoeff=0.2503;MQ=45.27;MQ0=17;MQRankSum=-1.375;QD=13.17;ReadPosRankSum=1.832;VQSLOD=2.9914;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:15.94:95,16,0	0/1:7,0:7:3.66:55,0,4	0/0:47,0:15:17.44:0,17,213	0/0:26,0:8:13.81:0,14,111	0/1:24,0:24:15.19:373,0,15	0/1:10,1:11:18.69:136,0,19	1/1:11,0:10:26:230,26,0	0/1:15,1:15:15.09:151,0,15	1/1:12,0:12:25.14:198,25,0	1/1:25,2:26:50.06:473,50,0	1/1:28,0:28:5.60:360,6,0	1/1:17,2:19:30.77:247,31,0	1/1:11,0:11:18.87:150,19,0	1/1:20,0:20:36.89:312,37,0	1/1:13,0:13:20.60:121,21,0	1/1:15,0:15:21.67:211,22,0	1/1:16,0:16:3.56:86,4,0	1/1:20,3:23:38.21:410,38,0	1/1:22,1:19:27.37:337,27,0	1/1:17,0:17:29.56:305,30,0	1/1:5,6:10:3:78,3,0	1/1:14,0:14:30.43:221,30,0	1/1:13,4:17:27.28:264,27,0	1/1:7,2:9:9:74,9,0	0/1:14,0:14:21.33:112,0,21	1/1:16,1:17:19.81:270,20,0	1/1:19,0:19:29.34:224,29,0	1/1:11,1:12:0.41:236,0,0
chr10	89957078	.	TG	T	6256.55	PASS	AB=0.700;AC=51;AF=0.911;AN=56;BaseQRankSum=3.582;DP=493;FS=3.204;HRun=1;HaplotypeScore=175.5384;InbreedingCoeff=0.7032;MQ=44.83;MQ0=17;MQRankSum=-0.927;QD=15.04;ReadPosRankSum=3.360;VQSLOD=5.1612;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:26:56.89:611,57,0	1/1:3,3:6:11.88:103,12,0	0/0:47,1:15:31.65:0,32,304	0/0:28,1:10:19.49:0,19,159	1/1:9,16:25:25.06:266,25,0	1/1:7,5:12:14.27:147,14,0	1/1:3,7:9:26.02:154,26,0	0/1:8,6:13:6.80:91,0,7	1/1:0,10:10:29.07:178,29,0	1/1:9,16:24:64.87:459,65,0	1/1:11,16:27:52.38:428,52,0	1/1:5,12:17:38.21:240,38,0	1/1:1,7:9:23.65:174,24,0	1/1:2,17:20:56.57:350,57,0	1/1:6,6:12:27.55:160,28,0	1/1:2,13:16:44.33:296,44,0	1/1:10,6:15:25.37:220,25,0	1/1:8,11:20:48.64:300,49,0	1/1:10,14:20:39.07:246,39,0	1/1:4,11:15:43.59:271,44,0	1/1:8,1:8:1.76:53,2,0	1/1:0,14:14:38.51:262,39,0	1/1:6,11:17:35.40:285,35,0	1/1:2,6:8:14.56:86,15,0	1/1:7,7:14:18.22:156,18,0	1/1:11,9:20:34.61:242,35,0	1/1:1,17:18:47.03:318,47,0	1/1:3,9:12:12.41:158,12,0
chr10	89957081	.	TG	T	4291.78	PASS	AB=0.746;AC=49;AF=0.875;AN=56;BaseQRankSum=4.919;DP=493;FS=0.000;HRun=1;HaplotypeScore=181.4964;InbreedingCoeff=0.4296;MQ=42.23;MQ0=17;MQRankSum=-0.964;QD=10.27;ReadPosRankSum=4.271;VQSLOD=2.8864;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:8.99:107,9,0	1/1:4,1:5:8.75:81,9,0	0/0:44,0:14:32.79:0,33,432	0/0:30,0:10:19.56:0,20,229	0/1:11,15:27:8.33:202,0,8	0/1:8,5:13:7.82:104,0,8	1/1:5,5:9:18.42:114,18,0	1/1:9,5:14:13.30:95,13,0	1/1:0,9:10:25.40:111,25,0	1/1:13,13:27:57.39:352,57,0	1/1:13,14:28:22.47:314,22,0	1/1:3,12:15:24.09:134,24,0	1/1:2,5:8:19.41:113,19,0	1/1:3,13:19:48.76:243,49,0	1/1:4,6:10:21.06:135,21,0	1/1:6,11:17:38.85:215,39,0	1/1:11,5:15:5.98:183,6,0	1/1:11,11:22:32.14:240,32,0	1/1:11,13:20:31.55:185,32,0	1/1:4,10:15:37.15:199,37,0	0/1:7,1:8:37.20:41,0,37	1/1:3,10:13:33.65:180,34,0	1/1:9,7:17:32.93:263,33,0	1/1:4,4:9:13.55:53,14,0	1/1:7,6:13:0.72:97,1,0	1/1:10,8:19:29.65:180,30,0	1/1:6,10:18:43.36:223,43,0	1/1:2,9:11:11.44:128,11,0
chr10	89957088	.	GTTGTTGTTGTTT	G	10537.27	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=3.934;DP=504;FS=1.176;HRun=0;HaplotypeScore=242.7156;InbreedingCoeff=0.3032;MQ=40.50;MQ0=16;MQRankSum=-2.685;QD=24.79;ReadPosRankSum=6.211;VQSLOD=3.3082;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:18.69:166,0,19	0/1:5,0:5:4.57:5,0,39	0/0:44,0:13:20.93:0,21,687	0/0:33,0:9:24.05:0,24,568	1/1:19,6:25:59.22:751,59,0	1/1:13,0:13:22.73:360,23,0	1/1:11,0:10:26.95:360,27,0	1/1:7,9:15:21.76:434,22,0	1/1:12,0:10:26.62:294,27,0	1/1:26,0:25:53.60:664,54,0	1/1:26,0:26:36.64:750,37,0	1/1:13,0:13:29.37:315,29,0	1/1:8,0:8:1.59:181,2,0	1/1:21,0:21:56.60:743,57,0	1/1:13,0:13:1.93:157,2,0	1/1:19,0:19:29.32:530,29,0	0/1:16,0:15:13.67:178,0,14	1/1:21,0:21:8.74:489,9,0	1/1:17,8:20:26.21:483,26,0	1/1:15,0:15:22.79:508,23,0	0/1:8,0:7:56.13:175,0,56	1/1:10,0:10:30.07:405,30,0	1/1:18,0:18:25.38:562,25,0	1/1:9,0:9:4.36:201,4,0	1/1:16,0:16:26.91:354,27,0	1/1:20,0:20:48.66:672,49,0	1/1:17,0:17:25.23:469,25,0	0/1:14,0:14:16.24:336,0,16
chr10	89957091	.	GTTGTTGTTT	G	16365.43	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=3.716;DP=504;FS=1.726;HRun=0;HaplotypeScore=196.6266;InbreedingCoeff=0.6659;MQ=39.84;MQ0=17;MQRankSum=-0.092;QD=37.80;ReadPosRankSum=4.572;VQSLOD=4.4280;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:50.53:912,51,0	0/1:5,0:5:3.22:42,0,3	0/0:38,0:10:20.88:0,21,505	0/0:32,0:8:23.97:0,24,430	1/1:25,0:25:71.76:1156,72,0	1/1:14,1:15:30.09:572,30,0	1/1:11,0:10:27.06:445,27,0	1/1:16,0:15:34.31:476,34,0	1/1:12,0:10:30.07:476,30,0	1/1:17,9:25:64.31:1003,64,0	1/1:19,7:26:62.42:1144,62,0	1/1:14,0:14:36.03:551,36,0	1/1:11,0:11:24.79:359,25,0	1/1:18,3:21:57.19:1146,57,0	1/1:15,0:15:21.13:267,21,0	1/1:14,5:19:38.96:814,39,0	1/1:15,0:14:26.38:295,26,0	1/1:13,6:19:35.38:709,35,0	1/1:23,0:18:40.06:617,40,0	1/1:15,1:16:41.70:734,42,0	0/1:8,0:7:21.01:174,0,21	1/1:10,0:10:30.10:600,30,0	1/1:18,0:18:41.94:764,42,0	1/1:11,0:11:26.53:340,27,0	1/1:7,11:18:27.09:593,27,0	1/1:8,12:20:57.01:818,57,0	1/1:19,0:19:50.87:823,51,0	1/1:14,0:14:32.49:535,32,0
chr10	89957094	.	GTTGTTT	G	14406.16	PASS	AB=0.889;AC=51;AF=0.911;AN=56;BaseQRankSum=3.654;DP=490;FS=8.119;HRun=0;HaplotypeScore=173.5759;InbreedingCoeff=0.7471;MQ=39.70;MQ0=14;MQRankSum=0.909;QD=34.14;ReadPosRankSum=2.936;VQSLOD=3.9228;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,7:24:59.75:925,60,0	1/1:5,0:5:9.98:130,10,0	0/0:36,0:10:15.05:0,15,329	0/0:31,0:8:16.02:0,16,304	1/1:18,6:25:64.61:898,65,0	1/1:5,9:15:27.06:426,27,0	1/1:10,1:10:27.05:393,27,0	1/1:14,1:14:22.77:367,23,0	1/1:9,5:12:36.04:468,36,0	1/1:19,6:24:64.43:838,64,0	1/1:17,8:25:64.47:927,64,0	1/1:8,5:13:35.75:470,36,0	1/1:9,2:12:29.90:350,30,0	1/1:15,6:21:57.19:974,57,0	1/1:16,0:16:25.99:447,26,0	1/1:10,7:17:39.13:714,39,0	1/1:15,0:14:33.85:445,34,0	1/1:17,0:17:35.34:586,35,0	1/1:19,2:16:22.11:491,22,0	1/1:12,5:17:41.78:594,42,0	0/1:7,1:7:20.43:139,0,20	1/1:3,7:10:30.10:542,30,0	1/1:11,6:18:46.97:688,47,0	1/1:7,3:10:26.81:291,27,0	1/1:13,4:17:27.09:437,27,0	1/1:18,2:20:49.43:642,49,0	1/1:9,9:18:50.79:737,51,0	1/1:11,2:13:38.83:487,39,0
chr10	89957096	.	TG	T	1175.82	PASS	AB=0.993;AC=29;AF=0.518;AN=56;BaseQRankSum=8.587;DP=476;FS=1.423;HRun=1;HaplotypeScore=177.7943;InbreedingCoeff=-0.3413;MQ=38.75;MQ0=11;MQRankSum=-7.722;QD=2.90;ReadPosRankSum=6.044;VQSLOD=-0.1126;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:82.71:83,0,173	0/1:6,0:6:27.12:28,0,27	0/0:33,0:9:15.05:0,15,200	0/1:29,0:8:8.32:8,0,126	0/1:22,2:24:99:119,0,100	1/1:13,1:14:17.98:95,18,0	0/1:12,0:11:29:29,0,38	0/1:14,0:14:20.93:21,0,128	0/1:14,0:12:5.64:6,0,117	0/1:23,0:23:68.26:102,0,68	0/1:25,0:25:55.04:96,0,55	0/1:12,0:12:17.65:52,0,18	0/0:11,0:11:3.40:0,3,144	1/1:21,0:21:32.14:131,32,0	0/0:15,0:15:19.23:0,19,186	1/1:17,0:17:13.21:63,13,0	0/1:14,0:13:15.70:16,0,64	1/1:17,0:17:30.99:139,31,0	0/1:18,0:16:57.34:57,0,102	0/1:16,0:16:35.72:36,0,53	0/1:8,0:7:1.11:1,0,71	0/1:11,0:11:5.19:44,0,5	0/1:16,0:16:23.26:44,0,23	0/0:11,0:11:1.69:0,2,105	1/1:17,0:17:20.49:82,20,0	0/1:20,0:20:44.70:45,0,177	0/1:17,0:17:22.69:23,0,87	0/1:14,1:15:23.32:23,0,171
chr10	89957097	.	GTTT	G	9412.92	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.125;DP=479;FS=14.050;HRun=8;HaplotypeScore=165.8194;InbreedingCoeff=0.9152;MQ=40.50;MQ0=12;MQRankSum=0.116;QD=22.63;ReadPosRankSum=2.665;VQSLOD=1.5698;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,1:26:47.06:613,47,0	1/1:5,1:6:6.46:65,6,0	0/0:31,0:8:15.05:0,15,248	0/0:32,0:9:23.44:0,23,203	1/1:24,0:24:60.78:575,61,0	1/1:14,0:14:24.35:247,24,0	1/1:12,0:11:29.21:278,29,0	1/1:14,0:14:32.55:282,33,0	1/1:15,0:13:34.17:302,34,0	1/1:23,0:23:53.39:533,53,0	1/1:25,0:25:48.92:584,49,0	1/1:12,0:12:25.90:256,26,0	1/1:11,0:11:27.83:253,28,0	1/1:21,0:21:56.51:599,57,0	1/1:10,5:15:26.04:347,26,0	1/1:17,0:17:39.08:460,39,0	1/1:11,4:14:38.23:361,38,0	1/1:18,0:17:17.56:360,18,0	1/1:18,0:16:21.45:322,21,0	1/1:16,0:16:38.40:375,38,0	1/1:7,0:6:11.14:77,11,0	1/1:11,0:11:32.91:367,33,0	1/1:15,0:16:36.44:388,36,0	1/1:11,0:11:25.26:191,25,0	1/1:17,0:17:26.23:257,26,0	1/1:20,0:20:51.03:466,51,0	1/1:17,0:17:47.05:457,47,0	1/1:15,0:15:44.43:399,44,0
chr10	89957099	.	T	TC	3098.08	PASS	AB=0.874;AC=25;AF=0.446;AN=56;BaseQRankSum=-0.030;DP=481;FS=4.099;HRun=0;HaplotypeScore=170.3333;InbreedingCoeff=-0.7676;MQ=40.52;MQ0=13;MQRankSum=-6.662;QD=7.61;ReadPosRankSum=-1.631;VQSLOD=3.3816;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,5:27:99:242,0,237	0/1:6,0:6:20.64:21,0,56	0/0:29,0:7:15.05:0,15,210	0/0:33,0:8:11.09:0,11,203	0/1:18,6:24:99:406,0,146	0/1:12,1:13:16.65:111,0,17	0/1:9,3:11:79.06:148,0,79	0/1:12,2:14:80.65:81,0,194	0/1:15,1:14:57.87:58,0,125	0/1:21,2:23:99:152,0,176	0/1:18,7:25:99:261,0,187	0/1:10,2:12:38.66:39,0,104	0/1:10,1:11:32.27:32,0,157	0/1:14,7:21:95.96:255,0,96	0/1:15,0:15:37.45:37,0,229	0/1:13,4:17:99:126,0,116	0/1:13,2:14:49.50:50,0,175	0/1:12,6:17:5.88:311,0,6	0/1:17,1:16:99:100,0,120	0/1:12,4:16:99:118,0,109	0/1:7,0:6:1.42:1,0,55	0/1:9,2:11:66.83:131,0,67	0/1:14,2:16:99:176,0,109	0/0:11,1:12:16.70:0,17,147	0/1:16,1:17:17.42:139,0,17	0/1:17,3:20:90.03:90,0,269	0/1:16,2:18:48.68:49,0,237	0/1:11,4:15:99:117,0,234
chr10	89957103	.	TTTC	T	4260.92	PASS	AB=0.994;AC=45;AF=0.804;AN=56;BaseQRankSum=11.505;DP=486;FS=3.250;HRun=0;HaplotypeScore=181.1388;InbreedingCoeff=0.1212;MQ=41.32;MQ0=12;MQRankSum=-8.202;QD=9.91;ReadPosRankSum=6.308;VQSLOD=4.4131;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:39.46:253,39,0	0/1:7,0:7:18.05:26,0,18	0/0:25,0:7:14.86:0,15,225	0/0:31,0:8:4.42:0,4,160	1/1:24,0:24:39.65:270,40,0	1/1:14,0:14:18.78:143,19,0	1/1:12,0:11:15.78:113,16,0	0/1:15,0:15:13.96:45,0,14	1/1:16,0:14:21.38:122,21,0	0/1:23,0:23:11.56:188,0,12	1/1:24,0:24:45.41:311,45,0	1/1:14,0:14:26.97:186,27,0	1/1:10,1:11:17.97:116,18,0	1/1:21,0:21:53.31:399,53,0	0/1:17,0:17:3.50:119,0,4	1/1:18,0:18:38.29:261,38,0	1/1:14,0:14:28.03:228,28,0	1/1:20,0:18:31.72:188,32,0	0/1:21,0:18:48.08:73,0,48	1/1:16,0:16:7.51:153,8,0	1/1:6,0:5:2.45:15,2,0	1/1:12,0:12:28.83:195,29,0	1/1:12,1:13:31.81:214,32,0	0/1:12,0:12:6:59,0,6	1/1:18,0:18:17.57:134,18,0	0/1:20,1:21:28.75:137,0,29	1/1:18,1:19:1.63:198,2,0	1/1:15,0:15:2.73:115,3,0
chr10	89957719	.	C	CAAAA	8456.11	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.632;DP=570;FS=42.256;HRun=13;HaplotypeScore=120.5918;InbreedingCoeff=0.8106;MQ=73.44;MQ0=0;MQRankSum=-3.770;QD=15.72;ReadPosRankSum=0.227;VQSLOD=-0.1477;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:32:20.26:236,20,0	1/1:2,0:5:8.07:41,8,0	0/0:16,0:19:8.65:0,9,177	0/0:9,0:12:13.57:0,14,130	1/1:1,0:19:49.61:493,50,0	1/1:2,0:15:18.06:222,18,0	1/1:12,1:25:34.84:478,35,0	1/1:17,1:30:44.47:565,44,0	1/1:4,0:16:16.26:214,16,0	1/1:8,0:21:50.25:640,50,0	1/1:3,2:19:47.87:584,48,0	1/1:10,9:25:24.05:329,24,0	1/1:7,0:25:14.96:194,15,0	1/1:9,1:28:22.89:366,23,0	1/1:4,0:21:29.45:216,29,0	1/1:1,0:22:33.10:421,33,0	1/1:3,0:23:29.36:194,29,0	1/1:4,5:12:11.25:163,11,0	1/1:4,1:14:31.31:379,31,0	1/1:6,0:13:32.21:347,32,0	1/1:4,1:18:19.90:237,20,0	1/1:4,0:17:31.53:353,32,0	1/1:5,0:20:25.87:314,26,0	1/1:5,0:24:17.99:221,18,0	1/1:7,0:16:17.78:225,18,0	1/1:8,0:31:60:658,60,0	1/1:15,0:33:29.18:293,29,0	1/1:3,0:12:4.31:71,4,0
chr10	89958205	.	TGGG	T	3193.13	PASS	AB=0.794;AC=33;AF=0.589;AN=56;BaseQRankSum=-2.555;DP=341;FS=1.773;HRun=15;HaplotypeScore=68.5753;InbreedingCoeff=0.5318;MQ=81.46;MQ0=1;MQRankSum=-3.180;QD=13.19;ReadPosRankSum=6.273;VQSLOD=1.1412;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:3.89:0,4,38	0/0:2,0:2:0:0,0,0	0/0:22,0:19:40.97:0,41,347	0/0:16,0:15:6.59:0,7,110	0/0:7,0:8:0:0,0,0	1/1:7,13:21:50.70:517,51,0	1/1:7,13:21:50.65:526,51,0	1/1:8,10:18:23.10:268,23,0	1/1:1,2:4:8.96:85,9,0	1/1:10,0:11:5.79:35,6,0	1/1:6,0:8:2.89:18,3,0	0/0:10,0:10:0:0,0,0	0/1:7,2:9:0.16:0,0,0	1/1:8,0:8:2.43:17,2,0	0/0:5,0:4:2.99:0,3,24	1/1:7,2:9:8.96:97,9,0	0/0:10,0:10:4.73:0,5,52	1/1:5,2:7:2.95:34,3,0	1/1:7,7:14:20.07:224,20,0	1/1:8,7:15:17.61:197,18,0	1/1:4,20:24:33.02:370,33,0	0/0:5,0:5:0:0,0,0	0/1:6,1:7:0:0,0,0	1/1:10,1:14:8.50:68,8,0	0/0:6,0:6:0:0,0,0	1/1:6,7:14:20.39:197,20,0	1/1:9,18:27:45.60:617,46,0	0/1:6,4:11:4.56:66,0,5
chr10	89958694	.	AT	A	180.24	PASS	AB=0.921;AC=7;AF=0.125;AN=56;BaseQRankSum=5.926;DP=431;FS=12.927;HRun=13;HaplotypeScore=126.5067;InbreedingCoeff=0.1840;MQ=67.96;MQ0=3;MQRankSum=-2.490;QD=2.15;ReadPosRankSum=2.762;VQSLOD=-0.6031;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,20:38:12.56:261,13,0	0/0:8,0:8:21:0,21,195	0/1:14,1:11:2.30:2,0,81	0/0:14,0:11:2.95:0,3,106	0/0:11,0:11:14.36:0,14,123	0/0:18,1:19:11.09:0,11,261	0/0:12,0:12:32.95:0,33,308	0/0:28,1:29:32.83:0,33,444	0/0:6,0:6:15.02:0,15,142	0/0:15,1:16:0.51:0,1,144	0/0:9,1:9:5.06:0,5,106	0/0:9,0:9:13.41:0,13,121	0/0:13,0:13:23.53:0,24,251	0/0:15,0:15:29.11:0,29,263	0/0:15,0:16:29.84:0,30,267	0/0:9,0:9:13.64:0,14,127	0/0:19,0:19:44.06:0,44,436	0/0:34,0:31:73.81:0,74,694	0/0:18,0:15:28.28:0,28,260	0/0:13,0:13:27.70:0,28,230	0/0:19,0:15:27.04:0,27,262	0/1:6,0:7:0.84:1,0,104	0/1:3,1:4:12.91:13,0,45	0/0:26,0:26:30.70:0,31,337	0/0:12,0:12:14.49:0,14,194	0/0:16,0:17:29.10:0,29,275	0/1:10,1:11:6:6,0,103	0/1:7,0:7:0.36:0,0,76
chr10	89959132	.	TA	T	3530.83	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=8.872;DP=534;FS=3.994;HRun=9;HaplotypeScore=59.1647;InbreedingCoeff=0.9726;MQ=71.30;MQ0=5;MQRankSum=2.364;QD=22.49;ReadPosRankSum=0.573;VQSLOD=4.5144;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:38.89:0,39,383	0/0:7,0:7:21.05:0,21,235	0/0:41,1:21:29.75:0,30,255	0/0:35,0:13:6.80:0,7,40	0/0:25,1:26:29.62:0,30,570	1/1:1,23:24:63.03:576,63,0	1/1:1,8:9:15.01:137,15,0	1/1:2,23:25:68.80:582,69,0	0/0:15,0:15:39.09:0,39,433	0/0:21,0:21:60.14:0,60,672	0/0:17,0:17:42.07:0,42,458	0/0:20,0:20:57.15:0,57,642	0/0:21,0:21:57.14:0,57,639	0/0:19,0:19:54.07:0,54,564	0/0:15,0:15:45.12:0,45,512	0/0:16,0:16:45:0,45,501	0/0:25,0:25:72.16:0,72,799	0/0:17,0:17:51.05:0,51,561	1/1:3,19:22:56.97:502,57,0	1/1:4,12:16:33.01:302,33,0	1/1:0,8:8:24.01:219,24,0	0/0:11,0:11:24.06:0,24,268	0/0:11,0:11:30.04:0,30,324	0/0:21,0:20:54.14:0,54,614	0/0:21,0:21:47.99:0,48,505	1/1:3,18:21:53.91:471,54,0	1/1:2,25:27:72.04:659,72,0	1/1:2,3:5:9:82,9,0
chr10	89959499	.	G	GGGGGT	512.43	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.281;DP=350;FS=0.000;HRun=0;HaplotypeScore=70.9522;InbreedingCoeff=0.5476;MQ=84.15;MQ0=1;MQRankSum=-2.836;QD=42.70;ReadPosRankSum=-1.553;VQSLOD=3.1420;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,8:12:21.07:604,21,0	0/0:5,0:5:12.04:0,12,226	0/0:16,0:14:0.92:0,1,117	0/0:28,0:23:16.90:0,17,210	0/0:5,0:5:12.02:0,12,194	0/0:12,0:12:24.07:0,24,423	0/0:19,0:19:33.58:0,34,624	0/0:13,0:13:9.02:0,9,166	0/0:8,0:8:15.05:0,15,283	0/0:10,0:10:21.06:0,21,367	0/0:9,0:9:12.04:0,12,227	0/0:14,0:14:30.10:0,30,567	0/0:17,0:17:39.10:0,39,636	0/0:17,0:17:36.09:0,36,584	0/0:10,0:10:21.06:0,21,365	0/0:13,0:13:27.09:0,27,507	0/0:36,0:36:87.28:0,87,1586	0/0:21,0:21:54.12:0,54,919	0/0:6,0:6:6.02:0,6,113	0/0:6,0:6:12.03:0,12,196	0/0:16,0:16:30.10:0,30,552	0/0:8,0:8:21.07:0,21,387	0/0:7,0:7:9.02:0,9,138	0/0:7,0:7:15.05:0,15,283	0/0:10,0:10:15.04:0,15,252	0/0:9,0:9:24.08:0,24,453	0/0:12,0:12:24.08:0,24,448	0/0:3,0:3:6.02:0,6,112
chr10	89962747	.	CGGAGAGAGAGAG	C	5506.90	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-3.968;DP=430;FS=9.302;HRun=0;HaplotypeScore=134.6803;InbreedingCoeff=0.2004;MQ=69.84;MQ0=9;MQRankSum=-1.708;QD=14.19;ReadPosRankSum=1.749;VQSLOD=2.8345;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:99:196,0,118	1/1:6,0:6:4.99:25,5,0	0/0:24,0:13:14.07:0,14,143	0/1:37,0:20:1.96:2,0,103	0/0:18,0:18:0.47:0,0,1	1/1:12,0:13:11.86:145,12,0	1/1:16,0:16:32.90:330,33,0	1/1:23,0:23:48.01:442,48,0	1/1:10,1:10:12.04:254,12,0	1/1:9,0:7:17.93:149,18,0	1/1:5,2:7:11.87:167,12,0	1/1:10,0:9:17.93:157,18,0	1/1:15,0:14:32.90:264,33,0	1/1:13,0:13:6.02:178,6,0	0/1:12,0:12:99:121,0,374	1/1:16,1:17:15.05:443,15,0	0/1:17,0:17:99:143,0,484	1/1:15,0:15:41.40:305,41,0	1/1:9,0:9:21:249,21,0	1/1:10,0:10:14.92:117,15,0	1/1:20,0:20:32.87:259,33,0	1/1:4,0:4:2.64:17,3,0	1/1:18,0:18:9.03:266,9,0	0/1:16,0:16:38.17:300,0,38	1/1:8,0:8:2.94:18,3,0	1/1:32,0:32:61.77:647,62,0	1/1:17,0:16:8.96:196,9,0	1/1:7,0:7:16.97:120,17,0
chr10	89962748	.	GGAGAGAGAGAGGGA	G	5873.06	PASS	AB=0.981;AC=46;AF=0.821;AN=56;BaseQRankSum=-4.186;DP=428;FS=12.739;HRun=0;HaplotypeScore=145.2442;InbreedingCoeff=0.1538;MQ=68.84;MQ0=9;MQRankSum=0.049;QD=15.22;ReadPosRankSum=1.403;VQSLOD=3.0473;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:99:218,0,190	1/1:6,0:6:4.99:25,5,0	0/0:24,0:13:14.07:0,14,143	0/1:36,0:19:1.31:1,0,102	0/0:6,12:18:0.47:0,0,1	1/1:2,0:13:11.95:171,12,0	1/1:15,0:16:32.90:344,33,0	1/1:23,0:23:48.01:442,48,0	1/1:12,0:11:11.99:131,12,0	1/1:9,0:7:17.93:149,18,0	0/1:7,0:7:25.04:76,0,25	1/1:10,0:9:17.94:189,18,0	1/1:15,0:14:32.90:264,33,0	1/1:5,8:13:6.02:243,6,0	0/1:12,0:12:99:121,0,448	1/1:4,10:17:15.05:551,15,0	0/1:17,0:17:99:143,0,585	1/1:15,0:15:41.40:305,41,0	1/1:8,0:9:21:263,21,0	1/1:9,0:9:14.92:117,15,0	1/1:19,0:19:32.87:259,33,0	1/1:0,4:4:2.64:17,3,0	1/1:4,13:18:9.03:346,9,0	0/1:14,2:16:63.46:365,0,63	1/1:1,0:8:2.94:18,3,0	1/1:5,25:31:66.70:735,67,0	1/1:3,13:16:8.96:261,9,0	1/1:7,0:7:16.75:118,17,0
chr10	89962750	.	AGAGAGAGAGG	A	5330.84	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-3.883;DP=416;FS=13.409;HRun=0;HaplotypeScore=119.3222;InbreedingCoeff=0.1421;MQ=69.07;MQ0=9;MQRankSum=-0.864;QD=14.18;ReadPosRankSum=1.254;VQSLOD=2.9388;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:99:220,0,100	1/1:5,0:5:4.99:25,5,0	0/0:24,0:13:14.07:0,14,143	0/1:36,0:19:11.17:11,0,102	0/0:16,0:16:0.47:0,0,1	1/1:13,0:13:11.85:130,12,0	1/1:16,0:16:32.90:316,33,0	1/1:21,0:21:48.01:442,48,0	1/1:2,10:11:12.04:355,12,0	1/1:9,0:7:17.93:149,18,0	1/1:7,0:7:11.87:135,12,0	1/1:8,0:7:17.93:146,18,0	1/1:14,0:13:32.90:264,33,0	1/1:12,0:12:6.02:150,6,0	0/1:10,0:10:99:121,0,295	1/1:17,0:17:15.05:374,15,0	0/1:18,0:18:99:140,0,450	1/1:15,0:15:41.40:305,41,0	1/1:9,0:9:21:235,21,0	1/1:9,0:9:14.92:117,15,0	1/1:18,0:18:32.87:259,33,0	1/1:4,0:4:2.64:17,3,0	1/1:17,0:17:9.03:225,9,0	0/1:16,0:16:14.94:272,0,15	1/1:8,0:8:2.94:18,3,0	1/1:29,0:29:61.96:619,62,0	1/1:17,0:16:8.96:168,9,0	1/1:6,0:6:17.30:122,17,0
chr10	89962802	.	A	AACCAGCGC	701.52	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.307;DP=403;FS=6.744;HRun=0;HaplotypeScore=135.3609;InbreedingCoeff=0.9224;MQ=67.29;MQ0=7;MQRankSum=-4.467;QD=35.08;ReadPosRankSum=-4.534;VQSLOD=1.5487;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:9,9:20:27.09:796,27,0	0/0:5,0:5:15.04:0,15,343	0/0:19,0:13:30.06:0,30,573	0/0:30,0:15:30.08:0,30,670	0/0:11,0:11:17.90:0,18,477	0/0:18,0:18:33.10:0,33,787	0/0:10,0:10:27.05:0,27,714	0/0:26,0:26:63.19:0,63,1464	0/0:13,0:13:30.08:0,30,522	0/0:16,0:16:36.12:0,36,895	0/0:6,0:6:12.04:0,12,317	0/0:10,0:10:27.09:0,27,654	0/0:7,0:7:18.06:0,18,478	0/0:11,0:10:23.76:0,24,520	0/0:13,0:13:20.08:0,20,556	0/0:17,0:17:36.12:0,36,842	0/0:12,0:12:24.08:0,24,599	0/0:15,0:15:42.12:0,42,1001	0/0:20,0:20:42.02:0,42,970	0/0:12,0:12:33.07:0,33,768	0/0:17,0:17:35.76:0,36,847	0/0:15,0:15:32.58:0,33,783	0/0:13,0:13:30.10:0,30,787	0/0:12,0:12:29.49:0,29,590	0/0:12,0:12:21.07:0,21,557	0/0:17,0:17:45.15:0,45,1136	0/0:16,0:16:32.91:0,33,840	0/0:10,0:10:30.10:0,30,797
chr10	89963069	.	A	AG	3208.18	PASS	AB=0.886;AC=48;AF=0.857;AN=56;BaseQRankSum=-0.272;DP=205;FS=0.000;HRun=0;HaplotypeScore=52.9882;InbreedingCoeff=0.1931;MQ=39.91;MQ0=13;MQRankSum=0.445;QD=18.23;ReadPosRankSum=3.849;VQSLOD=5.7068;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:9:5.12:161,5,0	1/1:1,2:3:6.01:61,6,0	0/0:14,0:3:8.29:0,8,41	0/0:15,0:2:2.68:0,3,11	1/1:9,0:9:17.94:155,18,0	1/1:4,0:4:6.01:65,6,0	1/1:10,1:11:13.42:246,13,0	0/1:10,0:8:4.24:86,0,4	1/1:5,0:4:12.02:121,12,0	1/1:2,0:2:3.48:33,3,0	1/1:5,0:5:14.94:135,15,0	1/1:4,0:2:6.01:59,6,0	1/1:5,0:5:15.03:158,15,0	1/1:2,1:3:7.83:67,8,0	0/1:5,0:5:2.61:91,0,3	1/1:9,0:9:5.68:182,6,0	0/1:3,16:19:20.79:52,0,21	1/1:7,0:7:18.03:183,18,0	1/1:12,0:11:23.10:280,23,0	1/1:5,1:6:16.34:117,16,0	0/1:4,0:4:4.57:79,0,5	1/1:2,0:1:3.01:30,3,0	1/1:4,0:4:8.14:63,8,0	1/1:6,0:6:12.39:98,12,0	1/1:5,0:5:15.03:151,15,0	1/1:16,0:16:35.98:416,36,0	1/1:9,0:8:21.04:211,21,0	1/1:1,0:1:3.01:30,3,0
chr10	89963987	.	CT	C	370.83	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.933;DP=429;FS=1.124;HRun=1;HaplotypeScore=72.0519;InbreedingCoeff=0.7973;MQ=89.59;MQ0=0;MQRankSum=-3.436;QD=26.49;ReadPosRankSum=-0.716;VQSLOD=3.2926;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:36.12:465,36,0	0/0:12,0:12:36.12:0,36,575	0/0:23,0:23:61.07:0,61,882	0/0:22,0:24:59.43:0,59,845	0/0:20,0:20:57.18:0,57,884	0/0:22,0:22:66.23:0,66,1053	0/0:13,0:13:39.13:0,39,622	0/0:32,0:32:93.32:0,93,1485	0/0:19,0:19:57.18:0,57,887	0/0:18,0:19:57.19:0,57,892	0/0:4,0:4:12.04:0,12,192	0/0:15,0:15:45.15:0,45,718	0/0:26,0:26:78.25:0,78,1209	0/0:21,0:21:63.21:0,63,1005	0/0:28,0:28:84.29:0,84,1340	0/0:15,0:15:45.15:0,45,718	0/0:9,0:9:24.08:0,24,383	0/0:12,0:12:36.12:0,36,575	0/0:15,0:15:45.15:0,45,719	0/0:10,0:10:30.10:0,30,477	0/0:20,0:20:54.18:0,54,862	0/0:4,0:4:12.04:0,12,189	0/0:8,0:8:24.08:0,24,381	0/0:7,0:7:18.06:0,18,285	0/0:9,0:9:24.08:0,24,383	0/0:15,0:15:45.15:0,45,699	0/0:12,0:12:33.11:0,33,526	0/0:1,0:1:3.01:0,3,48
chr10	89965028	.	TTTTTTTTTTTTTTCG	T	15524.12	PASS	AB=0.870;AC=47;AF=0.839;AN=56;BaseQRankSum=4.900;DP=302;FS=63.270;HRun=0;HaplotypeScore=155.3354;InbreedingCoeff=0.2182;MQ=48.67;MQ0=19;MQRankSum=-3.419;QD=56.45;ReadPosRankSum=5.131;VQSLOD=2.2017;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,7:15:11.45:818,11,0	0/1:6,0:6:23.98:312,0,24	0/0:16,0:4:12.02:0,12,271	0/0:11,0:7:12.04:0,12,346	1/1:4,10:14:32.92:990,33,0	1/1:4,7:11:26.94:1016,27,0	1/1:1,10:11:20.92:840,21,0	1/1:4,18:20:38.78:1060,39,0	1/1:6,4:10:17.45:549,17,0	0/1:4,3:7:16.47:583,0,16	1/1:4,4:8:17.76:485,18,0	1/1:4,2:6:5.56:239,6,0	1/1:7,3:10:17.45:468,17,0	1/1:5,6:11:20.51:689,21,0	0/1:15,0:14:22.54:753,0,23	1/1:3,5:7:14.75:522,15,0	0/1:17,0:16:99:151,0,104	1/1:0,4:4:12.04:480,12,0	1/1:7,4:8:20.92:628,21,0	1/1:4,2:5:5.55:240,6,0	1/1:1,4:5:6.02:91,6,0	1/1:4,5:9:20.76:638,21,0	0/1:6,7:13:10.93:912,0,11	1/1:5,4:8:5.09:239,5,0	1/1:7,3:9:27.09:714,27,0	1/1:3,8:11:26.79:1015,27,0	1/1:11,8:16:7.92:974,8,0	1/1:3,1:1:3.01:120,3,0
chr10	89965029	.	TTTTTTTTTTTTTCG	T	14573.11	PASS	AB=0.667;AC=51;AF=0.911;AN=56;BaseQRankSum=2.669;DP=289;FS=33.599;HRun=0;HaplotypeScore=153.7188;InbreedingCoeff=0.5572;MQ=48.10;MQ0=19;MQRankSum=-2.624;QD=55.62;ReadPosRankSum=3.189;VQSLOD=2.4731;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:17:41.86:797,42,0	0/1:3,3:6:6.57:442,0,7	0/0:16,0:4:12.02:0,12,241	0/0:11,0:7:12.04:0,12,307	1/1:17,0:17:38.65:893,39,0	1/1:8,2:10:30.10:948,30,0	1/1:10,0:10:21.07:687,21,0	1/1:21,0:19:53.24:909,53,0	1/1:7,0:7:21.07:498,21,0	1/1:9,1:10:10.56:633,11,0	1/1:9,0:9:23.98:477,24,0	1/1:4,0:4:9.03:232,9,0	1/1:6,0:6:18.04:340,18,0	1/1:8,0:8:24.08:594,24,0	1/1:6,9:14:32.64:1105,33,0	1/1:9,0:8:24.04:520,24,0	1/1:15,1:15:2.82:323,3,0	1/1:4,0:4:12.04:393,12,0	1/1:10,0:7:21.07:497,21,0	1/1:5,0:4:8.97:232,9,0	1/1:5,0:5:6.02:70,6,0	1/1:8,0:8:20.81:532,21,0	1/1:13,1:14:9.07:806,9,0	1/1:7,0:6:5.34:195,5,0	1/1:11,0:10:30.09:592,30,0	1/1:9,0:9:27.09:819,27,0	1/1:15,1:13:34.20:905,34,0	1/1:5,0:2:6.02:134,6,0
chr10	89965041	.	TCG	T	6844.41	PASS	AB=0.893;AC=52;AF=0.929;AN=56;BaseQRankSum=1.519;DP=302;FS=8.852;HRun=0;HaplotypeScore=132.6896;InbreedingCoeff=0.3285;MQ=37.51;MQ0=19;MQRankSum=-2.019;QD=23.60;ReadPosRankSum=2.291;VQSLOD=5.3722;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,7:15:39.02:402,39,0	1/1:4,0:4:11.98:106,12,0	0/1:12,0:5:5.98:6,0,40	0/0:11,0:4:3.01:0,3,49	1/1:11,9:20:47.96:466,48,0	1/1:9,2:11:32.92:279,33,0	1/1:10,0:10:20.92:161,21,0	1/1:19,1:19:54.08:611,54,0	1/1:4,4:9:27:270,27,0	1/1:10,5:15:44.99:478,45,0	1/1:4,4:8:21:211,21,0	1/1:3,3:6:15:157,15,0	1/1:4,3:7:21.02:217,21,0	1/1:7,2:9:26.98:261,27,0	1/1:10,4:13:38.93:355,39,0	1/1:6,3:8:23.99:238,24,0	1/1:4,6:9:3.98:200,4,0	1/1:4,0:4:11.95:92,12,0	0/1:8,3:7:7.33:147,0,7	1/1:4,2:5:15.01:155,15,0	1/1:4,1:5:6.02:72,6,0	1/1:8,1:9:23.82:219,24,0	1/1:10,5:15:41.97:412,42,0	1/1:7,2:8:12:120,12,0	1/1:5,10:14:42.04:454,42,0	1/1:10,2:12:35.94:332,36,0	1/1:13,2:12:32.93:290,33,0	1/1:4,3:4:12.02:132,12,0
chr10	89965116	.	CT	C	11702.24	PASS	AB=0.929;AC=54;AF=0.964;AN=56;BaseQRankSum=3.570;DP=495;FS=0.979;HRun=4;HaplotypeScore=227.9069;InbreedingCoeff=0.0030;MQ=68.21;MQ0=0;MQRankSum=-5.832;QD=23.64;ReadPosRankSum=3.494;VQSLOD=3.0745;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:50.72:537,51,0	1/1:1,6:7:14.97:146,15,0	0/1:10,2:12:46.38:46,0,105	0/1:17,0:17:13.29:13,0,135	1/1:2,16:18:29.92:238,30,0	1/1:1,13:14:39.10:424,39,0	1/1:4,11:15:35.42:340,35,0	1/1:1,18:19:50.93:533,51,0	1/1:3,25:28:74.94:799,75,0	1/1:1,21:22:50.76:646,51,0	1/1:1,20:21:44.11:335,44,0	1/1:1,17:18:51.13:552,51,0	1/1:3,11:14:30.08:338,30,0	1/1:0,23:23:68.21:725,68,0	1/1:2,29:31:83.22:853,83,0	1/1:0,16:16:47.86:499,48,0	1/1:2,19:21:35.75:354,36,0	1/1:0,8:8:21.06:234,21,0	1/1:2,18:20:45.12:504,45,0	1/1:0,19:19:46.31:462,46,0	1/1:1,10:11:20.20:165,20,0	1/1:1,12:13:35.42:350,35,0	1/1:0,19:19:49.52:366,50,0	1/1:0,11:11:23.55:236,24,0	1/1:4,26:30:71.80:707,72,0	1/1:1,14:15:41.91:452,42,0	1/1:1,24:25:68.92:739,69,0	1/1:0,4:4:11.82:109,12,0
chr10	89965122	.	A	AG	7590.04	PASS	AB=0.860;AC=54;AF=0.964;AN=56;BaseQRankSum=4.620;DP=495;FS=5.164;HRun=1;HaplotypeScore=246.7299;InbreedingCoeff=-0.0389;MQ=70.04;MQ0=0;MQRankSum=-7.820;QD=15.33;ReadPosRankSum=3.315;VQSLOD=4.9149;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:58.41:352,58,0	1/1:0,7:7:18.49:110,18,0	0/1:10,2:12:55.66:56,0,134	0/1:16,3:19:49.26:49,0,233	1/1:0,16:16:36.83:185,37,0	1/1:0,13:13:37.79:209,38,0	1/1:1,15:15:40.99:259,41,0	1/1:0,20:20:56.62:422,57,0	1/1:0,25:25:72.81:427,73,0	1/1:1,22:23:55.62:453,56,0	1/1:1,19:20:47.26:256,47,0	1/1:0,18:18:52.18:288,52,0	1/1:0,11:11:30.49:154,30,0	1/1:0,24:24:64.80:328,65,0	1/1:0,29:29:84.41:529,84,0	1/1:0,18:18:52.43:299,52,0	1/1:0,20:20:41.13:264,41,0	1/1:0,8:8:20.78:145,21,0	1/1:2,18:20:47.80:398,48,0	1/1:1,20:21:55.09:310,55,0	1/1:1,12:13:26.42:163,26,0	1/1:0,12:12:34.15:199,34,0	1/1:2,19:21:55.44:318,55,0	1/1:0,12:12:25.74:134,26,0	1/1:0,26:26:75.21:421,75,0	1/1:0,18:18:53.21:380,53,0	1/1:0,26:26:75.09:418,75,0	1/1:0,4:4:11.22:65,11,0
chr10	89966011	.	AG	A	1623.42	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.554;DP=871;FS=5.792;HRun=1;HaplotypeScore=268.8964;InbreedingCoeff=0.9994;MQ=87.87;MQ0=0;MQRankSum=-4.464;QD=36.08;ReadPosRankSum=1.455;VQSLOD=2.5421;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,45:45:99:1718,123,0	0/0:14,0:14:39.13:0,39,623	0/0:40,0:41:99:0,117,1795	0/0:33,0:33:93.79:0,94,1457	0/0:33,0:33:78.25:0,78,1224	0/0:22,0:22:60.20:0,60,953	0/0:34,0:34:99:0,99,1582	0/0:47,0:47:99:0,141,2254	0/0:45,0:45:99:0,126,1996	0/0:48,0:48:99:0,138,2193	0/0:19,0:19:35.99:0,36,575	0/0:40,0:40:99:0,105,1655	0/0:23,0:23:63.21:0,63,1006	0/0:43,0:43:99:0,129,2061	0/0:50,0:49:99:0,144,2300	0/0:38,0:38:99:0,111,1774	0/0:35,0:35:99:0,105,1670	0/0:18,0:18:54.18:0,54,863	0/0:23,0:23:66.22:0,66,1019	0/0:19,0:19:51.14:0,51,788	0/0:59,0:59:99:0,148,2325	0/0:17,0:17:36.12:0,36,572	0/0:17,0:17:36.12:0,36,575	0/0:22,0:22:57.19:0,57,906	0/0:14,0:14:39.13:0,39,623	0/0:37,0:37:99:0,108,1714	0/0:22,0:22:63.17:0,63,968	0/0:13,0:13:39.13:0,39,618
chr10	89966072	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGACTATGTAGA	G	6709.73	PASS	AB=0.839;AC=37;AF=0.712;AN=52;BaseQRankSum=3.338;DP=621;FS=2.089;HRun=0;HaplotypeScore=486.4634;InbreedingCoeff=0.1946;MQ=51.42;MQ0=17;MQRankSum=2.542;QD=14.94;ReadPosRankSum=3.552;VQSLOD=1.1905;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:20:55.51:237,0,56	./.	0/0:61,0:20:24.08:0,24,754	0/0:64,0:30:23.97:0,24,820	1/1:18,0:18:2.99:25,3,0	1/1:12,0:12:15.05:390,15,0	1/1:13,0:13:2.75:134,3,0	0/1:28,0:27:94.30:317,0,94	1/1:18,0:18:8.98:261,9,0	0/1:16,18:34:53.21:774,0,53	0/1:10,11:21:0.14:0,0,0	0/0:21,0:21:0:0,0,0	1/1:12,0:12:15.05:393,15,0	1/1:17,0:17:5.99:50,6,0	1/1:26,0:26:9.03:272,9,0	1/1:20,0:20:9.02:433,9,0	0/1:14,0:14:34.04:341,0,34	1/1:12,0:12:12.04:447,12,0	1/1:8,11:17:33.01:812,33,0	1/1:8,18:26:5.97:68,6,0	1/1:33,0:32:6:145,6,0	0/1:6,22:28:0.21:0,0,0	1/1:8,18:26:2.82:48,3,0	0/0:13,0:13:0.77:0,1,2	./.	1/1:10,23:33:54.12:1239,54,0	0/1:11,0:11:28.75:223,0,29	1/1:7,0:6:3.01:100,3,0
chr10	89966089	.	TGTGTGTG	T	1524.68	PASS	AB=0.869;AC=22;AF=0.407;AN=54;BaseQRankSum=4.004;DP=531;FS=21.735;HRun=0;HaplotypeScore=212.1627;InbreedingCoeff=-0.4252;MQ=44.51;MQ0=20;MQRankSum=-1.304;QD=4.97;ReadPosRankSum=2.743;VQSLOD=1.1323;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,3:22:85.12:85,0,231	./.	0/0:81,0:23:69.12:0,69,1266	0/0:68,0:16:36.12:0,36,776	0/1:8,1:9:15.86:16,0,67	0/1:10,4:14:99:138,0,118	0/1:7,1:8:35.67:36,0,135	0/1:20,0:19:99:111,0,334	0/1:14,3:17:98.70:99,0,192	0/1:19,0:19:53.90:54,0,228	0/0:11,0:11:0:0,0,0	0/0:9,8:17:15.05:0,15,187	0/1:14,3:17:99:105,0,222	0/1:11,2:13:29.49:41,0,29	0/1:8,6:14:62:97,0,62	0/1:10,4:14:99:140,0,164	0/1:16,4:20:99:126,0,401	0/1:7,3:11:99:143,0,163	0/1:12,0:12:91.33:154,0,91	1/1:18,0:18:2.97:20,3,0	0/1:20,5:24:63.91:64,0,67	0/0:22,0:22:0:0,0,0	0/1:18,0:18:0.08:0,0,0	0/0:14,2:16:14.60:0,15,182	0/0:5,4:9:6.02:0,6,75	0/1:24,0:24:99:107,0,242	0/1:5,4:9:84.01:84,0,111	1/1:1,1:1:3.01:52,3,0
chr10	89966097	.	T	TA	62.68	PASS	AB=0.878;AC=15;AF=0.268;AN=56;BaseQRankSum=7.035;DP=549;FS=26.635;HRun=0;HaplotypeScore=198.1557;InbreedingCoeff=-0.0461;MQ=46.82;MQ0=15;MQRankSum=-6.547;QD=0.29;ReadPosRankSum=4.612;VQSLOD=1.2460;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,4:23:15.76:16,0,209	0/0:2,0:2:6.02:0,6,83	0/0:72,0:22:63.10:0,63,782	0/0:63,0:19:42.25:0,42,485	0/0:7,1:8:9.03:0,9,124	0/1:7,4:11:18.76:19,0,145	0/0:10,1:11:6.47:0,6,194	0/0:16,0:15:42.12:0,42,542	0/1:16,3:19:9.85:10,0,222	0/0:19,0:19:5.39:0,5,225	0/1:11,0:11:0.10:0,0,0	0/0:14,9:23:30.09:0,30,395	0/1:11,3:14:7.82:8,0,258	0/0:10,3:13:5.50:0,5,83	0/1:9,6:15:19.15:19,0,108	0/1:10,5:15:31.16:31,0,219	0/1:18,4:22:6.05:6,0,527	0/1:11,3:14:28.14:28,0,278	0/1:12,0:12:39.75:40,0,135	0/1:18,0:18:0:0,0,0	0/0:29,5:33:10.03:0,10,318	0/1:22,0:22:0.26:0,0,0	0/1:18,0:18:0.10:0,0,0	0/0:18,2:20:15.01:0,15,205	0/0:9,4:13:18.03:0,18,227	0/0:24,0:24:4.17:0,4,421	0/0:10,5:15:3.32:0,3,288	1/1:0,1:1:2.90:16,3,0
chr10	89966108	.	A	ATG	10173.79	PASS	AB=0.645;AC=42;AF=0.778;AN=54;BaseQRankSum=-1.103;DP=659;FS=6.036;HRun=0;HaplotypeScore=200.4144;InbreedingCoeff=0.2091;MQ=49.65;MQ0=14;MQRankSum=2.115;QD=20.72;ReadPosRankSum=2.241;VQSLOD=4.8330;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,20:29:27.06:432,27,0	1/1:0,4:4:9.03:145,9,0	0/0:68,0:29:50.47:0,50,550	0/0:64,1:29:46.12:0,46,501	0/1:3,9:13:21.36:179,0,21	1/1:5,8:14:15.05:242,15,0	1/1:2,15:17:33.11:530,33,0	0/1:5,22:28:30.99:1003,0,31	0/1:5,13:19:6.30:381,0,6	0/1:22,0:22:27.74:567,0,28	./.	1/1:12,16:29:36.12:581,36,0	1/1:7,13:21:35.33:511,35,0	0/1:5,11:16:9.82:133,0,10	0/1:7,16:23:8.95:360,0,9	1/1:5,20:25:31.25:664,31,0	1/1:4,19:25:46.39:717,46,0	1/1:6,17:23:5.74:569,6,0	1/1:11,1:12:27.09:416,27,0	1/1:21,1:21:6.02:94,6,0	1/1:8,35:44:2.11:545,2,0	0/0:23,0:23:0:0,0,0	1/1:18,0:18:2.91:48,3,0	1/1:5,20:23:21.03:339,21,0	1/1:4,12:16:21.07:339,21,0	1/1:23,0:24:45.14:703,45,0	1/1:6,13:19:36.12:581,36,0	1/1:1,2:3:6.02:97,6,0
chr10	89966258	.	GTGTGTGTGTGTGTGTGTGTGTGTA	G	2485.17	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.624;DP=729;FS=0.000;HRun=0;HaplotypeScore=425.9603;InbreedingCoeff=0.8313;MQ=44.48;MQ0=16;MQRankSum=-5.093;QD=41.42;ReadPosRankSum=-2.076;VQSLOD=0.6687;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:26.95:0,27,811	1/1:4,7:11:9.03:420,9,0	0/0:35,0:13:27.09:0,27,1328	0/0:40,0:14:36.12:0,36,1703	0/0:22,0:22:21.10:0,21,670	0/0:15,0:15:15.02:0,15,528	0/0:24,0:25:17.42:0,17,836	0/0:33,0:33:69.22:0,69,2383	0/0:32,0:32:36:0,36,932	0/0:25,0:25:60.07:0,60,1527	0/0:16,0:16:12.04:0,12,346	0/0:22,0:22:33.11:0,33,1053	0/0:28,0:28:33.58:0,34,1050	0/0:27,0:27:22.54:0,23,469	1/1:25,8:33:31.43:1460,31,0	0/0:25,0:25:45.63:0,46,1492	1/1:12,4:16:12.75:737,13,0	0/0:13,0:13:33.11:0,33,1373	0/0:16,0:15:12.08:0,12,936	0/0:22,0:20:14.95:0,15,311	0/0:45,0:45:65.68:0,66,2218	0/0:29,0:29:28.60:0,29,1152	0/0:27,0:27:7.99:0,8,270	0/0:40,0:40:0.82:0,1,129	0/0:27,0:27:18.06:0,18,607	0/0:40,0:40:55.54:0,56,2136	0/0:13,0:14:31.35:0,31,903	0/0:12,0:11:22.32:0,22,408
chr10	89966268	.	GTGTGTGTGTGTGTA	G	7453.27	PASS	AB=0.986;AC=33;AF=0.589;AN=56;BaseQRankSum=2.414;DP=732;FS=19.207;HRun=0;HaplotypeScore=310.8239;InbreedingCoeff=-0.1493;MQ=45.63;MQ0=13;MQRankSum=-1.332;QD=12.12;ReadPosRankSum=1.140;VQSLOD=2.2696;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:36:28.58:237,29,0	1/1:8,0:8:8.96:182,9,0	0/0:31,0:12:27.07:0,27,584	0/1:43,0:19:0.53:1,0,625	0/1:23,1:24:26.67:106,0,27	0/1:15,0:15:1.31:18,0,1	0/0:21,0:21:11.91:0,12,116	0/1:38,0:38:99:368,0,250	0/1:30,1:31:95.15:288,0,95	1/1:29,2:31:29.48:1046,29,0	1/1:14,1:15:2.76:33,3,0	0/1:21,0:21:1.26:318,0,1	0/1:26,0:26:23.61:131,0,24	1/1:23,2:25:21.71:451,22,0	1/1:26,0:26:24.54:726,25,0	0/1:30,0:30:16.08:394,0,16	1/1:13,0:13:11.45:242,11,0	0/1:15,0:15:99:263,0,270	0/1:16,1:14:27.43:389,0,27	1/1:18,0:17:9.06:164,9,0	0/1:48,0:47:99:271,0,103	0/1:30,1:31:98.61:236,0,99	0/0:25,2:27:0.09:0,0,1	0/0:37,1:38:0.25:0,1,0	0/1:27,1:28:18.71:64,0,19	0/1:40,1:41:83.43:834,0,83	1/1:20,0:20:3.75:371,4,0	0/1:14,0:13:10.75:320,0,11
chr10	89966270	.	GTGTGTGTGTGTA	G	9326.46	PASS	AB=0.756;AC=43;AF=0.768;AN=56;BaseQRankSum=1.542;DP=715;FS=2.671;HRun=0;HaplotypeScore=277.1717;InbreedingCoeff=0.2175;MQ=48.30;MQ0=13;MQRankSum=-0.337;QD=15.60;ReadPosRankSum=3.567;VQSLOD=3.6078;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,1:35:45.24:475,45,0	1/1:7,0:7:8.96:154,9,0	0/0:35,0:16:29.11:0,29,494	0/0:46,0:22:5.34:0,5,536	1/1:19,6:25:0.31:137,0,0	1/1:14,1:15:5.72:47,6,0	0/1:11,10:21:0.30:0,0,0	0/1:38,0:38:57.27:458,0,57	0/1:15,15:30:46.99:376,0,47	1/1:22,7:29:62.91:1229,63,0	1/1:8,7:15:2.74:65,3,0	1/1:15,6:21:26.77:481,27,0	1/1:12,14:26:5.71:214,6,0	1/1:18,6:24:22.11:430,22,0	1/1:17,0:17:27.06:652,27,0	1/1:27,4:31:44.61:546,45,0	1/1:9,0:9:5.36:173,5,0	0/1:12,3:15:99:404,0,144	1/1:9,8:14:26.58:441,27,0	1/1:11,6:16:9.34:239,9,0	0/1:45,3:47:4.83:281,0,5	1/1:26,5:31:13.38:349,13,0	0/1:8,19:27:0.22:0,0,1	0/0:13,23:36:0.17:0,0,0	1/1:12,14:26:3.01:107,3,0	1/1:13,26:39:64.11:1051,64,0	1/1:17,3:20:32.76:511,33,0	0/1:4,10:13:18.50:504,0,18
chr10	89966272	.	GTGTGTGTGTA	G	7198.13	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=2.622;DP=715;FS=2.842;HRun=0;HaplotypeScore=267.0150;InbreedingCoeff=0.1585;MQ=48.62;MQ0=11;MQRankSum=-1.348;QD=12.43;ReadPosRankSum=3.232;VQSLOD=3.6866;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,5:36:45.12:588,45,0	1/1:7,0:7:8.96:126,9,0	0/0:36,0:18:34.79:0,35,494	0/0:44,0:22:8.18:0,8,459	0/1:27,0:27:2.06:187,0,2	0/1:16,0:16:0.13:38,0,0	0/0:20,0:21:5.62:0,6,48	0/1:36,0:36:99:361,0,118	0/1:29,0:29:46.90:262,0,47	1/1:29,0:29:44.98:921,45,0	1/1:15,0:15:2.89:32,3,0	1/1:20,0:20:30.42:350,30,0	1/1:24,0:24:5.71:147,6,0	1/1:23,0:23:21.69:334,22,0	1/1:26,0:26:27.06:554,27,0	1/1:30,0:30:35.93:388,36,0	1/1:12,0:12:13.90:183,14,0	0/1:14,0:14:99:275,0,131	1/1:17,0:14:10.64:342,11,0	1/1:17,0:16:9.21:172,9,0	0/1:45,0:44:5.59:180,0,6	0/1:31,0:31:28.82:230,0,29	0/1:26,0:26:0.33:0,0,1	0/0:35,0:35:1.21:0,1,2	1/1:25,0:25:2.60:74,3,0	0/1:39,0:39:4.37:740,0,4	1/1:20,0:20:32.82:378,33,0	0/1:14,0:13:11.21:337,0,11
chr10	89966881	.	TTTTTG	T	1814.39	PASS	AB=1.000;AC=7;AF=0.135;AN=52;BaseQRankSum=0.379;DP=327;FS=4.101;HRun=0;HaplotypeScore=85.9815;InbreedingCoeff=0.5676;MQ=71.93;MQ0=2;MQRankSum=2.038;QD=26.68;ReadPosRankSum=0.787;VQSLOD=2.7890;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:57.19:0,57,1548	1/1:7,4:11:9.03:167,9,0	0/0:25,0:21:29.09:0,29,586	0/0:17,0:13:11.72:0,12,161	0/0:13,0:13:11.93:0,12,183	./.	0/0:9,0:9:12.04:0,12,213	0/0:16,0:13:18.06:0,18,357	0/0:9,0:9:18.04:0,18,309	0/0:11,0:10:15.93:0,16,250	0/0:7,0:6:3.01:0,3,49	0/0:6,0:6:3.01:0,3,56	0/0:9,0:8:9.50:0,10,147	0/0:12,0:10:24.06:0,24,356	1/1:5,14:19:36.12:667,36,0	0/0:2,0:2:6.02:0,6,112	1/1:7,23:30:60.21:1111,60,0	0/0:6,0:6:6.02:0,6,146	0/0:16,0:14:24.08:0,24,469	0/0:14,0:12:24.08:0,24,432	./.	0/0:9,0:8:3.01:0,3,55	0/0:6,0:6:6.02:0,6,100	0/1:8,0:8:2.47:2,0,55	0/0:9,0:7:6.02:0,6,108	0/0:9,0:7:9.03:0,9,181	0/0:17,0:15:24.07:0,24,372	0/0:4,0:4:6.02:0,6,130
chr10	89983475	.	TTC	T	313.87	PASS	AB=0.948;AC=19;AF=0.339;AN=56;BaseQRankSum=3.803;DP=371;FS=5.682;HRun=0;HaplotypeScore=58.0950;InbreedingCoeff=-0.1916;MQ=84.08;MQ0=9;MQRankSum=0.724;QD=1.35;ReadPosRankSum=1.098;VQSLOD=0.8029;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:8.30:0,8,77	0/1:6,0:6:14.64:15,0,20	1/1:26,0:23:2.04:6,2,0	0/0:23,0:17:8.61:0,9,59	0/0:19,0:19:12.04:0,12,182	0/1:7,2:8:25.63:26,0,83	0/1:16,2:17:45.47:45,0,155	0/1:26,0:26:32.53:33,0,383	0/0:5,0:5:8.99:0,9,112	0/1:16,0:16:13.66:14,0,48	0/1:13,0:13:8.42:8,0,28	0/0:6,0:6:9.02:0,9,117	0/0:8,0:7:6.02:0,6,92	0/0:2,0:2:3:0,3,25	0/1:11,0:11:23.32:46,0,23	1/1:9,0:9:5.89:38,6,0	1/1:17,0:16:6.74:89,7,0	0/1:7,0:7:24.88:25,0,62	0/0:10,0:10:3.01:0,3,38	0/0:9,0:9:12.03:0,12,150	0/1:35,1:34:36.13:36,0,333	0/1:8,1:9:10.90:11,0,42	0/1:6,0:6:12.02:12,0,76	0/0:8,0:7:12.04:0,12,185	0/0:12,0:11:3.90:0,4,27	0/0:16,0:16:30.10:0,30,456	0/1:8,1:9:16.49:16,0,212	0/1:12,2:12:51.20:51,0,137
chr10	89983633	.	AACACACACACACAC	A	1213.93	PASS	AB=0.646;AC=10;AF=0.192;AN=52;BaseQRankSum=3.546;DP=328;FS=3.310;HRun=0;HaplotypeScore=140.0375;InbreedingCoeff=0.5662;MQ=67.34;MQ0=17;MQRankSum=-5.192;QD=22.07;ReadPosRankSum=-0.116;VQSLOD=2.7469;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:33.09:0,33,1697	0/0:5,0:7:6.02:0,6,202	./.	./.	0/0:11,0:11:18.06:0,18,662	0/0:14,0:13:17.89:0,18,875	0/0:15,0:16:26.12:0,26,1342	0/0:13,0:10:3.01:0,3,142	0/0:8,0:8:12.04:0,12,652	0/1:5,3:9:68.28:237,0,68	1/1:4,5:10:5.84:137,6,0	0/0:5,0:6:15.03:0,15,698	0/0:5,0:5:15.03:0,15,678	0/0:7,0:7:12.02:0,12,511	0/0:9,0:11:6:0,6,126	1/1:4,4:8:9.03:352,9,0	0/0:6,0:13:18.06:0,18,623	1/1:5,3:7:3.01:117,3,0	0/0:10,0:10:14.84:0,15,716	0/0:11,0:12:18.06:0,18,872	0/0:20,0:17:27.09:0,27,1313	0/0:10,0:10:15.05:0,15,744	0/0:9,0:9:20.90:0,21,1158	0/0:11,0:11:21.07:0,21,1259	1/1:4,10:14:15.05:507,15,0	0/0:14,0:15:33.10:0,33,1365	0/0:6,0:6:14.98:0,15,483	0/1:2,0:6:5.61:6,0,278
chr10	89984265	.	T	TAG	5990.79	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.405;DP=742;FS=2.769;HRun=0;HaplotypeScore=98.0890;InbreedingCoeff=0.9928;MQ=86.81;MQ0=0;MQRankSum=0.014;QD=49.10;ReadPosRankSum=4.675;VQSLOD=6.0626;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,166,2491	0/0:12,0:12:36.11:0,36,528	0/0:26,0:26:62.66:0,63,865	0/0:24,0:24:66.10:0,66,895	0/0:28,0:28:78.23:0,78,1151	0/0:26,0:26:78.25:0,78,1168	0/0:35,0:35:99:0,99,1509	0/0:35,0:35:99:0,99,1470	0/0:19,0:19:57.18:0,57,850	1/1:2,35:37:99:1948,105,0	1/1:3,19:22:48.16:898,48,0	0/0:33,0:33:99:0,99,1471	0/0:16,0:16:45.15:0,45,677	0/0:18,0:18:51.15:0,51,735	0/0:30,0:30:84.25:0,84,1241	1/1:2,25:27:78.25:1456,78,0	0/0:35,0:35:99:0,99,1493	1/1:0,19:19:54.19:1012,54,0	0/0:28,0:28:81.21:0,81,1189	0/0:18,0:18:54.18:0,54,823	0/0:34,0:34:99:0,102,1554	0/0:31,0:31:90.29:0,90,1353	0/0:24,0:24:60.18:0,60,895	0/0:29,0:29:84.29:0,84,1279	1/1:0,16:17:36.12:677,36,0	0/0:28,0:28:78.26:0,78,1191	0/0:31,0:31:93.29:0,93,1395	0/0:5,0:5:12.04:0,12,184
chr10	89984786	.	T	TTGAC	6409.22	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-11.461;DP=600;FS=0.426;HRun=0;HaplotypeScore=91.9942;InbreedingCoeff=0.9994;MQ=67.26;MQ0=0;MQRankSum=1.521;QD=52.11;ReadPosRankSum=4.948;VQSLOD=5.7674;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.14:0,69,1111	0/0:12,0:12:36.07:0,36,550	0/0:26,0:26:63.16:0,63,870	0/0:27,0:26:67.87:0,68,936	0/0:20,0:20:60.07:0,60,880	0/0:19,0:19:48.13:0,48,844	0/0:18,0:18:54.13:0,54,844	0/0:30,0:30:87.22:0,87,1373	0/0:22,0:22:66.16:0,66,1066	1/1:0,34:34:93.03:2132,93,0	1/1:1,18:21:44.90:1016,45,0	0/0:19,0:19:54.16:0,54,947	0/0:17,0:17:45.14:0,45,793	0/0:15,0:15:45.09:0,45,696	0/0:24,0:24:69.17:0,69,1141	1/1:2,15:18:36.12:944,36,0	0/0:29,0:29:84.22:0,84,1434	1/1:1,29:31:54.19:1428,54,0	0/0:20,0:20:55.30:0,55,829	0/0:21,0:21:60.15:0,60,1001	0/0:16,0:16:45.09:0,45,723	0/0:22,0:22:60.13:0,60,987	0/0:18,0:18:48.14:0,48,828	0/0:25,0:25:75.14:0,75,1197	1/1:2,17:19:33.11:888,33,0	0/0:29,0:29:75.23:0,75,1332	0/0:17,0:17:51.11:0,51,794	0/0:8,0:8:24.04:0,24,417
chr10	89985229	.	GAAGA	G	2325.30	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-1.353;DP=638;FS=7.481;HRun=0;HaplotypeScore=211.9842;InbreedingCoeff=0.9382;MQ=52.30;MQ0=13;MQRankSum=4.675;QD=32.30;ReadPosRankSum=2.989;VQSLOD=2.9552;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.24:0,90,2055	0/0:3,0:3:9.03:0,9,204	0/0:59,0:14:23.67:0,24,286	0/0:36,0:16:26.82:0,27,400	0/0:21,0:21:51.02:0,51,898	0/0:26,0:26:39.09:0,39,618	0/0:31,0:31:47.71:0,48,954	0/0:23,0:22:50.28:0,50,1148	0/0:20,0:20:51.14:0,51,846	1/1:5,20:25:57.06:825,57,0	1/1:1,14:15:39:611,39,0	0/0:32,0:32:69.08:0,69,1099	0/0:19,0:19:36.12:0,36,724	0/0:23,0:22:45.02:0,45,672	0/0:18,0:18:45.11:0,45,927	1/1:4,16:20:9.02:699,9,0	0/0:25,0:25:75.18:0,75,1584	1/1:3,1:4:6.02:93,6,0	0/0:21,0:21:48.11:0,48,814	0/0:19,0:19:42.03:0,42,685	0/0:20,0:20:14.94:0,15,204	0/0:19,0:19:36.04:0,36,572	0/0:14,0:14:35.38:0,35,528	0/0:30,0:30:32.99:0,33,649	1/1:3,5:8:15.05:262,15,0	0/0:28,0:28:63.06:0,63,1088	0/0:26,0:26:48.07:0,48,810	0/0:16,0:14:20.98:0,21,325
chr10	89985254	.	GGAGGGAGAGAGAGAGAGAGACA	G	27622.02	PASS	AB=0.947;AC=35;AF=0.625;AN=56;BaseQRankSum=12.945;DP=599;FS=1.322;HRun=0;HaplotypeScore=264.8809;InbreedingCoeff=0.8938;MQ=46.03;MQ0=18;MQRankSum=-10.477;QD=71.01;ReadPosRankSum=5.775;VQSLOD=4.0755;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.18:0,93,6261	0/0:4,0:4:12.04:0,12,959	0/0:50,0:7:14.87:0,15,216	0/0:29,0:9:13.88:0,14,724	1/1:1,16:17:24.08:1310,24,0	1/1:2,26:28:36.06:2022,36,0	1/1:5,28:32:24.04:1275,24,0	1/1:23,0:19:33.15:335,33,0	1/1:1,15:16:33.11:2004,33,0	0/0:25,0:25:71.39:0,71,4846	0/0:18,0:16:39.13:0,39,2594	1/1:1,23:24:51.18:3100,51,0	1/1:1,17:18:21.07:1249,21,0	1/1:1,15:15:36.12:2189,36,0	0/0:17,0:17:51.15:0,51,4317	0/1:17,1:18:99:140,0,2132	0/0:26,0:26:30.19:0,30,5368	0/0:4,0:4:12.04:0,12,743	1/1:4,19:23:57.01:2088,57,0	1/1:1,19:20:33.11:1752,33,0	1/1:1,22:23:12.04:642,12,0	1/1:0,21:21:30.10:1821,30,0	1/1:0,12:12:24.08:1455,24,0	1/1:2,26:27:15.05:858,15,0	0/0:4,0:4:12.03:0,12,805	1/1:1,33:34:80.92:2278,81,0	1/1:2,21:23:36.12:2189,36,0	1/1:3,9:10:15.05:912,15,0
chr10	89985524	.	A	AT	2543.41	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=-8.781;DP=471;FS=7.702;HRun=8;HaplotypeScore=50.6141;InbreedingCoeff=0.8053;MQ=67.33;MQ0=1;MQRankSum=1.290;QD=22.91;ReadPosRankSum=1.622;VQSLOD=4.1639;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:66.02:0,66,604	0/1:5,0:5:17.56:55,0,18	0/0:7,0:6:5.99:0,6,55	0/1:13,0:13:1.47:1,0,193	0/0:25,0:25:63.02:0,63,576	0/0:29,0:29:77.95:0,78,694	0/0:15,0:15:39.02:0,39,357	0/0:25,0:25:68.90:0,69,619	0/0:19,0:19:50.96:0,51,466	1/1:1,27:28:81.24:934,81,0	1/1:2,12:14:36.11:415,36,0	0/0:9,0:9:24.01:0,24,220	0/0:9,0:9:23.99:0,24,213	0/0:8,0:8:20.97:0,21,185	0/0:10,0:10:22.36:0,22,102	1/1:1,11:12:24.07:277,24,0	0/0:26,0:26:33.45:0,33,183	1/1:1,26:27:63.19:726,63,0	0/0:27,0:25:70.27:0,70,631	0/0:18,0:18:54.02:0,54,490	0/0:13,0:13:30:0,30,269	0/0:8,0:8:17.99:0,18,160	0/0:8,0:8:23.98:0,24,210	0/0:11,0:11:30.01:0,30,275	1/1:2,10:12:27.08:312,27,0	0/0:24,0:24:63.03:0,63,577	0/0:24,0:24:69.04:0,69,631	0/0:17,0:17:42.02:0,42,384
chr10	89987179	.	T	TTCTCTCTCTC	197.05	PASS	AB=1.000;AC=12;AF=0.250;AN=48;BaseQRankSum=1.402;DP=358;FS=7.618;HRun=0;HaplotypeScore=88.2095;InbreedingCoeff=0.3162;MQ=31.70;MQ0=99;MQRankSum=-1.237;QD=2.32;ReadPosRankSum=0.165;VQSLOD=0.6480;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,5:13:2.50:9,2,0	1/1:3,0:3:3.01:60,3,0	./.	0/0:11,0:4:2.23:0,2,57	0/0:16,0:13:14.98:0,15,310	0/0:16,0:12:12:0,12,277	0/0:24,0:16:0.47:0,0,1	0/0:20,0:10:8.99:0,9,165	0/0:8,0:5:3.01:0,3,85	1/1:7,0:6:6.02:112,6,0	./.	0/0:11,0:9:5.99:0,6,111	0/0:9,0:6:3.01:0,3,55	0/0:11,0:10:8.99:0,9,188	0/1:12,0:9:0.01:0,0,0	./.	1/1:5,0:4:3.01:116,3,0	./.	0/0:14,0:7:9.03:0,9,222	0/1:15,0:14:2.75:3,0,34	0/0:19,0:13:9.03:0,9,208	0/0:19,0:12:2.79:0,3,89	0/0:17,0:13:6.39:0,6,179	0/0:14,0:12:3.17:0,3,90	0/1:12,0:11:0:0,0,0	0/0:24,0:15:3.63:0,4,338	0/1:13,0:8:11.45:11,0,74	0/0:6,0:5:9.03:0,9,137
chr10	89987314	.	C	CTT	1313.13	PASS	AB=0.733;AC=8;AF=0.143;AN=56;BaseQRankSum=8.914;DP=604;FS=30.683;HRun=4;HaplotypeScore=88.6117;InbreedingCoeff=0.6451;MQ=61.46;MQ0=13;MQRankSum=-6.873;QD=20.52;ReadPosRankSum=-0.634;VQSLOD=0.0933;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:90.27:0,90,1155	0/0:3,0:3:9:0,9,102	0/0:57,0:19:16.87:0,17,249	0/0:60,0:20:27.81:0,28,313	0/0:23,0:23:60.18:0,60,778	0/0:19,0:19:51.15:0,51,650	0/0:21,0:21:63.16:0,63,818	0/0:17,0:17:48.16:0,48,630	0/0:12,0:12:27.08:0,27,356	1/1:5,9:14:34.43:435,34,0	1/1:3,12:15:33.48:432,33,0	0/0:12,0:12:33.11:0,33,435	0/0:12,0:12:33.04:0,33,410	0/0:12,0:12:33.10:0,33,430	0/0:23,0:23:66.21:0,66,870	1/1:10,0:10:1.06:134,1,0	0/0:27,0:27:72.21:0,72,939	0/1:10,4:14:68.37:197,0,68	0/0:21,0:18:48.15:0,48,626	0/0:16,0:16:39.10:0,39,487	0/0:19,0:19:57.18:0,57,736	0/0:21,0:20:54.18:0,54,710	0/0:22,0:21:51.06:0,51,646	0/0:37,0:36:93.45:0,93,1245	0/1:6,5:11:6.65:257,0,7	0/0:26,1:27:24.50:0,24,908	0/0:22,0:22:54.03:0,54,639	0/0:21,0:21:60.19:0,60,784
chr10	89987319	.	C	CT	642.22	PASS	AB=0.905;AC=11;AF=0.196;AN=56;BaseQRankSum=8.726;DP=606;FS=24.640;HRun=11;HaplotypeScore=76.8596;InbreedingCoeff=0.8196;MQ=58.16;MQ0=19;MQRankSum=-8.292;QD=8.03;ReadPosRankSum=-2.532;VQSLOD=0.0046;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:36:28.50:0,28,475	0/0:4,0:3:8.97:0,9,70	0/0:59,0:17:4.03:0,4,55	0/0:55,0:16:16.58:0,17,109	0/0:24,0:24:58.29:0,58,442	0/0:20,0:20:16.23:0,16,269	0/0:23,0:23:59.72:0,60,459	0/0:16,0:16:23.84:0,24,183	0/0:11,0:11:29.87:0,30,229	1/1:8,2:12:15.62:127,16,0	1/1:7,1:12:21.95:150,22,0	0/0:12,0:12:26.81:0,27,198	0/0:12,0:12:20.91:0,21,163	0/0:14,0:14:35.71:0,36,268	0/0:21,0:23:54.85:0,55,403	1/1:6,4:10:12.02:122,12,0	0/0:27,3:30:44.22:0,44,518	1/1:6,8:15:28.14:240,28,0	0/0:21,0:18:29.86:0,30,230	0/0:15,0:15:32.85:0,33,255	0/1:15,2:19:40.25:40,0,217	0/0:22,0:22:46.72:0,47,344	0/0:22,1:22:37.83:0,38,284	0/0:35,0:36:85.25:0,85,647	1/1:7,1:11:17.43:137,17,0	0/0:28,0:28:52.32:0,52,415	0/0:18,2:19:11.32:0,11,259	0/0:20,0:20:30.80:0,31,271
chr10	89988189	.	AT	A	1140.13	PASS	AB=0.842;AC=13;AF=0.232;AN=56;BaseQRankSum=5.373;DP=564;FS=3.871;HRun=14;HaplotypeScore=69.2202;InbreedingCoeff=0.6054;MQ=77.11;MQ0=4;MQRankSum=-0.962;QD=6.83;ReadPosRankSum=1.804;VQSLOD=2.8157;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,1:23:36.23:0,36,439	0/1:7,1:8:2.66:3,0,103	0/1:32,0:17:0.07:0,0,80	0/0:25,0:15:10.04:0,10,78	0/0:28,0:28:56.86:0,57,502	0/0:20,1:21:33.43:0,33,444	0/0:14,0:16:32.83:0,33,279	0/0:28,3:32:13.68:0,14,449	0/1:17,2:20:21.62:22,0,265	1/1:6,12:19:37.65:249,38,0	1/1:2,12:14:35.54:237,36,0	0/0:10,0:10:24.89:0,25,217	0/0:9,0:10:23.83:0,24,196	0/0:13,1:14:23.37:0,23,256	0/0:18,0:18:41.91:0,42,360	1/1:4,20:24:36.34:350,36,0	0/0:18,0:22:42.81:0,43,353	1/1:3,15:18:38.67:267,39,0	0/1:11,2:13:6.50:6,0,198	0/0:29,3:35:15.89:0,16,527	0/0:16,1:17:17.33:0,17,267	0/0:21,2:24:9.62:0,10,341	0/0:15,2:17:12.40:0,12,248	0/0:16,1:18:24.26:0,24,343	0/1:3,15:19:0.95:174,0,1	0/0:25,2:33:19.37:0,19,454	0/0:23,3:27:39.15:0,39,477	0/0:5,0:7:17.23:0,17,134
chr10	89990217	.	G	GACAACACCCTCCCAGG	22946.91	PASS	AB=0.875;AC=52;AF=0.963;AN=54;BaseQRankSum=-0.927;DP=270;FS=11.254;HRun=0;HaplotypeScore=345.0152;InbreedingCoeff=-0.0490;MQ=61.31;MQ0=0;MQRankSum=-1.149;QD=85.94;ReadPosRankSum=1.067;VQSLOD=3.5626;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:7.11:366,7,0	1/1:5,0:5:9.03:345,9,0	1/1:9,1:9:8.03:1025,8,0	0/1:4,0:4:6.56:651,0,7	1/1:13,0:13:36.05:1395,36,0	1/1:18,0:18:33.31:1186,33,0	0/1:7,0:7:5.87:651,0,6	1/1:15,0:15:33.09:1419,33,0	1/1:14,0:14:37.43:1483,37,0	1/1:15,0:15:31.34:1452,31,0	1/1:7,0:7:13.55:224,14,0	1/1:9,0:9:23.89:815,24,0	1/1:9,0:9:25.96:871,26,0	1/1:8,0:8:22.11:411,22,0	1/1:15,0:15:38.53:1500,39,0	1/1:9,0:9:25.74:704,26,0	1/1:10,0:10:22.24:836,22,0	./.	1/1:8,0:8:15.57:690,16,0	1/1:7,0:7:20.92:405,21,0	1/1:2,0:2:2.99:24,3,0	1/1:16,0:16:30.09:1009,30,0	1/1:6,0:6:15.65:608,16,0	1/1:9,0:9:21.03:764,21,0	1/1:4,0:4:9.03:466,9,0	1/1:11,0:11:30.65:951,31,0	1/1:16,0:16:41.66:1642,42,0	1/1:6,0:6:18.06:1056,18,0
chr10	89990595	.	TATAA	T	697.34	PASS	AC=12;AF=0.300;AN=40;BaseQRankSum=2.576;DP=241;FS=1.124;HRun=0;HaplotypeScore=40.5472;InbreedingCoeff=0.6607;MQ=66.95;MQ0=2;MQRankSum=1.797;QD=13.41;ReadPosRankSum=1.619;VQSLOD=2.0767;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,3:6:6.02:93,6,0	./.	0/0:7,0:4:0:0,0,0	./.	0/0:9,0:9:6.02:0,6,137	0/0:13,0:13:27.09:0,27,615	./.	0/0:33,0:33:24.05:0,24,487	0/0:4,0:4:6.02:0,6,141	1/1:7,1:8:3.01:47,3,0	1/1:6,3:9:9.03:140,9,0	0/0:7,0:7:6.02:0,6,141	0/0:7,0:7:6.02:0,6,141	./.	./.	1/1:3,3:6:9.03:140,9,0	0/0:10,0:19:24.08:0,24,433	1/1:8,4:12:12.04:186,12,0	0/0:10,0:12:9.03:0,9,157	0/0:7,0:7:3.01:0,3,46	./.	0/0:2,0:2:3.01:0,3,71	./.	./.	1/1:4,7:11:15.05:233,15,0	0/0:4,0:4:6.02:0,6,139	0/0:5,0:10:9.03:0,9,157	0/0:21,0:21:24.08:0,24,565
chr10	89990915	.	A	ACTCT	2672.43	PASS	AB=1.000;AC=33;AF=0.660;AN=50;BaseQRankSum=-1.304;DP=408;FS=15.218;HRun=0;HaplotypeScore=83.2481;InbreedingCoeff=0.5930;MQ=68.13;MQ0=7;MQRankSum=0.824;QD=10.78;ReadPosRankSum=-3.052;VQSLOD=0.8444;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:24:21.02:0,21,192	./.	./.	0/0:39,0:20:0.47:0,0,1	1/1:7,0:7:9.03:126,9,0	1/1:12,0:11:16.39:264,16,0	1/1:17,0:17:23.13:338,23,0	1/1:19,0:19:1.82:5,2,0	1/1:23,0:22:24.08:397,24,0	1/1:14,0:14:12.88:164,13,0	./.	1/1:7,1:10:3.48:61,3,0	1/1:5,5:13:8.82:155,9,0	1/1:5,8:14:3.01:71,3,0	1/1:8,0:8:5.96:43,6,0	1/1:20,0:21:29.12:496,29,0	0/1:20,0:25:45.53:46,0,116	1/1:18,0:18:18.47:244,18,0	0/0:11,0:9:2.74:0,3,12	0/0:7,0:7:3:0,3,25	0/0:14,0:14:12:0,12,155	1/1:5,0:4:8.98:125,9,0	1/1:0,4:6:3.01:71,3,0	1/1:9,11:23:3.01:71,3,0	1/1:13,0:12:8.97:160,9,0	0/0:9,0:9:10.74:0,11,114	0/0:14,0:16:16.27:0,16,258	0/0:13,0:12:9.02:0,9,141
chr10	89991031	.	A	AAAC	4635.60	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.973;DP=554;FS=0.946;HRun=0;HaplotypeScore=75.0851;InbreedingCoeff=0.9312;MQ=66.64;MQ0=5;MQRankSum=-1.032;QD=45.45;ReadPosRankSum=2.196;VQSLOD=6.4878;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:72.23:0,72,1049	0/0:10,0:10:24.05:0,24,335	0/0:24,0:14:29.99:0,30,395	0/0:27,0:22:38.65:0,39,461	0/0:24,0:23:60.17:0,60,872	0/0:15,0:15:45.14:0,45,653	0/0:18,0:18:53.92:0,54,730	0/0:20,0:20:45.15:0,45,654	0/0:18,0:18:39.13:0,39,582	1/1:5,22:24:66.20:1303,66,0	1/1:5,16:21:42.14:875,42,0	0/0:20,0:20:51.17:0,51,760	0/0:17,0:17:42.13:0,42,590	0/0:10,0:10:27.09:0,27,403	0/0:17,0:17:42.13:0,42,609	1/1:2,15:17:1.21:831,1,0	0/0:33,0:33:90.24:0,90,1276	1/1:2,13:15:36.12:750,36,0	0/0:14,0:14:30.09:0,30,428	0/0:28,0:28:75.25:0,75,1114	0/0:11,0:11:33.11:0,33,492	0/0:22,0:22:63.20:0,63,921	0/0:16,0:16:42.13:0,42,607	0/0:18,0:17:42.10:0,42,567	1/1:4,18:22:43.39:876,43,0	0/0:31,0:31:58.34:0,58,1130	0/0:25,0:25:57.19:0,57,851	0/0:4,0:4:9.03:0,9,134
chr10	89991961	.	ACTCTCT	A	1009.60	PASS	AB=0.963;AC=21;AF=0.420;AN=50;BaseQRankSum=1.105;DP=548;FS=0.833;HRun=0;HaplotypeScore=134.6860;InbreedingCoeff=0.0356;MQ=61.03;MQ0=15;MQRankSum=0.156;QD=3.70;ReadPosRankSum=3.150;VQSLOD=2.3715;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:33.73:345,34,0	1/1:4,0:7:0.89:2,1,0	./.	./.	0/0:7,0:14:3.01:0,3,38	1/1:11,0:10:2.99:24,3,0	0/0:25,10:34:11.99:0,12,101	0/0:19,0:18:11.89:0,12,96	0/1:24,0:25:56.22:56,0,224	1/1:25,0:25:14.47:207,14,0	0/1:15,0:15:0:0,0,0	0/1:16,0:16:4.28:4,0,95	0/0:7,0:11:6.01:0,6,63	0/0:22,0:21:0.25:0,0,98	0/0:7,7:16:0:0,0,0	0/1:22,0:23:32.44:36,0,32	0/0:25,0:25:2.99:0,3,57	1/1:10,0:10:3.01:42,3,0	0/1:14,0:13:12.80:46,0,13	0/1:12,0:12:24.79:25,0,82	0/0:52,0:51:59.85:0,60,632	0/1:16,0:15:55.29:78,0,55	0/0:6,0:13:2.80:0,3,13	0/1:32,0:35:99:123,0,423	./.	0/1:19,0:19:99:141,0,176	0/0:12,0:12:2.25:0,2,48	1/1:5,0:4:2.98:21,3,0
chr10	89991975	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACA	T	2356.17	PASS	AB=0.634;AC=9;AF=0.161;AN=56;BaseQRankSum=4.778;DP=620;FS=1.902;HRun=0;HaplotypeScore=373.3663;InbreedingCoeff=0.6434;MQ=53.47;MQ0=25;MQRankSum=-3.460;QD=24.54;ReadPosRankSum=-1.119;VQSLOD=0.6023;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,99,10091	0/0:8,0:8:9.40:0,9,900	0/0:12,0:2:3.01:0,3,51	0/0:18,0:11:28.69:0,29,1038	0/0:16,0:16:21.07:0,21,1828	0/0:10,0:9:24.07:0,24,1780	0/0:38,0:37:49.89:0,50,4686	0/0:16,0:13:39.13:0,39,2741	0/0:38,0:37:85.16:0,85,8767	1/1:6,21:26:34.29:1689,34,0	1/1:4,10:14:0.89:2,1,0	0/0:22,0:22:50.56:0,51,5017	0/0:14,0:14:30.10:0,30,2510	0/0:23,0:22:43.02:0,43,4453	0/0:23,0:22:22.42:0,22,1673	0/1:11,15:24:99:389,0,406	0/0:24,0:24:57.14:0,57,3301	1/1:3,7:10:6.02:387,6,0	0/0:16,0:13:36.11:0,36,2318	0/0:13,0:13:19.83:0,20,1636	0/0:64,0:62:99:0,128,13090	0/0:23,0:21:39.13:0,39,2970	0/0:11,0:11:9.03:0,9,813	0/0:44,0:42:99:0,105,11067	1/1:7,12:18:2.97:20,3,0	0/0:28,0:25:72.25:0,72,7416	0/0:13,0:13:28.42:0,28,2407	0/0:5,0:4:12.04:0,12,729
chr10	89993014	.	AACACACACACACACACAC	A	43.73	PASS	AB=0.857;AC=7;AF=0.135;AN=52;BaseQRankSum=3.715;DP=453;FS=0.000;HRun=0;HaplotypeScore=190.0479;InbreedingCoeff=0.2514;MQ=46.77;MQ0=28;MQRankSum=-0.735;QD=1.02;ReadPosRankSum=0.868;VQSLOD=2.7445;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:31:48.16:0,48,2110	0/0:6,0:6:5.23:0,5,180	0/0:35,0:7:0.47:0,0,1	./.	0/0:9,0:11:6.02:0,6,173	0/0:21,0:19:26.03:0,26,1095	0/0:16,0:15:11.20:0,11,232	0/0:12,0:10:2.97:0,3,20	0/0:12,0:12:3.48:0,3,109	1/1:10,2:12:0.24:86,0,0	1/1:8,3:10:0.47:1,0,0	0/0:9,0:8:11.97:0,12,291	0/0:8,0:8:9.03:0,9,389	0/0:10,0:9:3.90:0,4,123	0/0:18,0:17:24.08:0,24,1541	0/1:5,0:4:36.42:40,0,36	0/0:26,0:26:24.55:0,25,1111	1/1:14,0:14:0.34:12,0,0	0/0:8,0:6:3.01:0,3,78	0/0:12,0:12:6.02:0,6,259	0/0:44,0:41:39.13:0,39,1354	0/0:10,0:9:3.01:0,3,42	0/0:14,0:14:5.75:0,6,213	0/0:24,0:23:21.07:0,21,838	./.	0/0:19,0:18:33.08:0,33,1228	0/0:19,0:19:30.04:0,30,901	0/0:4,0:2:6.02:0,6,217
chr10	89993351	.	GTA	G	3141.21	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.335;DP=259;FS=0.000;HRun=0;HaplotypeScore=94.2414;InbreedingCoeff=0.5159;MQ=39.22;MQ0=7;MQRankSum=-2.305;QD=13.37;ReadPosRankSum=1.354;VQSLOD=3.4927;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:13:31.65:167,32,0	1/1:1,10:11:26.29:153,26,0	0/0:11,0:1:1.82:0,2,5	0/0:13,0:2:3.01:0,3,60	1/1:0,9:8:22.57:109,23,0	1/1:3,9:12:20.22:111,20,0	1/1:2,11:12:28.89:155,29,0	1/1:1,14:14:35.91:319,36,0	1/1:1,1:2:2.90:16,3,0	1/1:0,11:11:29.71:230,30,0	1/1:0,6:6:14.36:75,14,0	1/1:1,7:7:20.40:137,20,0	1/1:0,3:3:8.62:45,9,0	1/1:2,3:4:5.85:57,6,0	1/1:1,9:9:23.20:129,23,0	1/1:1,3:3:5.81:32,6,0	1/1:2,11:11:20.85:120,21,0	1/1:1,6:7:14.95:117,15,0	1/1:0,8:7:20.95:178,21,0	1/1:0,8:8:17.40:96,17,0	1/1:4,11:14:25.85:135,26,0	1/1:2,5:7:20.09:142,20,0	1/1:0,12:12:25.86:135,26,0	1/1:2,7:9:11.42:59,11,0	1/1:2,5:7:14.99:148,15,0	1/1:3,9:11:17.16:195,17,0	1/1:0,11:11:22.97:124,23,0	1/1:0,3:3:8.87:57,9,0
chr10	89993355	.	T	TGG	5758.07	PASS	AB=0.867;AC=53;AF=0.946;AN=56;BaseQRankSum=-0.342;DP=275;FS=0.000;HRun=1;HaplotypeScore=102.0136;InbreedingCoeff=0.3160;MQ=38.31;MQ0=2;MQRankSum=-2.597;QD=21.73;ReadPosRankSum=0.862;VQSLOD=2.7463;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:14:35.97:323,36,0	1/1:2,10:12:29.99:284,30,0	0/0:10,0:3:2.74:0,3,12	0/1:11,2:4:29.80:52,0,30	1/1:1,9:9:23.91:197,24,0	1/1:3,9:12:23.93:194,24,0	1/1:1,11:12:32.98:313,33,0	1/1:7,14:21:57.12:769,57,0	1/1:1,1:2:3:25,3,0	1/1:3,8:11:27.05:294,27,0	1/1:0,6:6:14.96:120,15,0	1/1:2,7:8:24:241,24,0	1/1:1,3:4:11.95:92,12,0	1/1:4,3:6:12:127,12,0	1/1:2,9:10:23.97:202,24,0	1/1:1,3:3:8.96:70,9,0	1/1:2,11:11:23.97:241,24,0	1/1:1,6:7:15.04:162,15,0	1/1:2,8:9:27.03:317,27,0	1/1:1,8:9:18.01:177,18,0	1/1:3,11:13:26.97:243,27,0	1/1:0,5:5:14.98:144,15,0	1/1:1,12:13:29.97:269,30,0	1/1:4,7:11:11.65:95,12,0	1/1:1,5:6:15.90:168,16,0	1/1:3,9:11:23.96:284,24,0	1/1:2,11:13:26.99:274,27,0	1/1:0,3:3:9.01:84,9,0
chr10	89993400	.	TA	T	3140.47	PASS	AB=0.979;AC=47;AF=0.839;AN=56;BaseQRankSum=-0.681;DP=312;FS=0.000;HRun=8;HaplotypeScore=94.2236;InbreedingCoeff=0.3611;MQ=55.10;MQ0=14;MQRankSum=-3.064;QD=10.79;ReadPosRankSum=0.641;VQSLOD=2.4569;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,8:16:23.87:204,24,0	1/1:10,0:9:20.49:122,20,0	0/1:28,2:15:2.50:2,0,141	0/1:12,0:6:23.99:24,0,29	1/1:6,3:8:2.90:18,3,0	1/1:4,8:12:26.97:248,27,0	1/1:9,10:16:29.93:267,30,0	1/1:6,11:16:29.93:267,30,0	1/1:4,1:4:8.87:58,9,0	0/1:9,0:8:5.52:53,0,6	1/1:5,2:7:1.36:41,1,0	1/1:7,6:12:23.83:192,24,0	1/1:2,4:6:12.02:115,12,0	1/1:5,3:8:12:114,12,0	1/1:17,0:15:32.32:196,32,0	0/0:13,0:10:12.95:0,13,43	1/1:21,0:16:26.30:156,26,0	0/0:4,0:3:2.04:0,2,6	1/1:2,4:6:11.91:94,12,0	1/1:3,5:7:8.95:76,9,0	1/1:0,5:5:8.23:64,8,0	1/1:3,3:5:11.83:93,12,0	1/1:6,2:8:2.99:29,3,0	1/1:2,9:10:23.99:220,24,0	0/0:4,0:4:2.04:0,2,6	1/1:5,13:17:5.67:306,6,0	1/1:5,9:14:29.69:253,30,0	1/1:2,2:4:6.01:58,6,0
chr10	89993407	.	AAGG	A	1364.87	PASS	AB=0.984;AC=15;AF=0.268;AN=56;BaseQRankSum=1.155;DP=314;FS=1.255;HRun=0;HaplotypeScore=93.8461;InbreedingCoeff=0.1497;MQ=54.83;MQ0=27;MQRankSum=-2.389;QD=8.92;ReadPosRankSum=-1.120;VQSLOD=2.9854;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:17.58:18,0,90	1/1:0,8:7:21.07:355,21,0	0/1:26,0:12:2.01:2,0,311	0/0:8,0:4:11.98:0,12,141	0/1:9,0:8:9.56:10,0,49	0/0:16,0:16:20.91:0,21,286	0/0:15,0:12:27.09:0,27,171	0/0:16,0:16:9.29:0,9,246	0/1:7,0:6:7.78:8,0,111	0/1:9,0:7:51.08:51,0,62	0/0:6,0:7:12.45:0,12,117	0/1:14,0:13:37.70:38,0,113	0/0:6,0:6:14.83:0,15,121	0/0:9,0:8:23.88:0,24,256	1/1:6,11:16:35.99:517,36,0	0/0:11,0:9:24.07:0,24,296	1/1:6,12:13:32.22:499,32,0	0/0:6,0:3:9.03:0,9,124	0/1:8,0:7:7.91:8,0,155	0/0:8,0:6:8.92:0,9,66	0/0:7,0:5:8.89:0,9,77	0/1:5,0:5:15.10:15,0,26	0/0:9,0:7:5.94:0,6,42	0/0:14,0:12:11.12:0,11,192	0/0:5,0:5:6.02:0,6,70	0/1:19,0:18:10.77:11,0,291	0/0:17,0:16:5.18:0,5,191	0/0:6,0:4:8.92:0,9,78
chr10	89993465	.	G	GCC	10328.52	PASS	AB=0.650;AC=47;AF=0.904;AN=52;BaseQRankSum=-2.068;DP=371;FS=0.000;HRun=3;HaplotypeScore=61.6779;InbreedingCoeff=-0.1517;MQ=34.95;MQ0=51;MQRankSum=-0.482;QD=27.84;ReadPosRankSum=-0.640;VQSLOD=3.4875;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,12:15:33.11:588,33,0	1/1:3,4:4:9:131,9,0	./.	./.	1/1:5,6:5:9.03:164,9,0	1/1:8,13:16:30.10:548,30,0	1/1:6,14:18:39.13:705,39,0	1/1:2,8:7:18.06:330,18,0	0/1:5,5:7:26.90:205,0,27	1/1:8,12:18:0.47:664,0,0	1/1:2,6:8:12.04:219,12,0	1/1:4,13:16:30.10:548,30,0	1/1:1,8:9:24.08:439,24,0	1/1:3,11:12:27.01:463,27,0	1/1:5,10:14:24.08:439,24,0	0/1:4,14:15:47.08:513,0,47	1/1:6,23:24:63.22:1153,63,0	0/1:9,3:5:68.81:150,0,69	1/1:6,8:8:17.93:289,18,0	1/1:1,15:10:21.07:383,21,0	1/1:2,6:6:18.06:330,18,0	1/1:2,4:4:6.02:108,6,0	1/1:2,7:9:14.92:274,15,0	0/1:7,10:14:60.38:258,0,60	1/1:2,3:5:6.02:110,6,0	0/1:7,14:17:86.62:511,0,87	1/1:3,15:16:0.20:672,0,0	1/1:8,3:8:9.01:134,9,0
chr10	89993502	.	GA	G	974.94	PASS	AB=0.921;AC=12;AF=0.214;AN=56;BaseQRankSum=1.737;DP=487;FS=1.812;HRun=12;HaplotypeScore=84.4693;InbreedingCoeff=0.7638;MQ=58.88;MQ0=29;MQRankSum=-2.339;QD=10.05;ReadPosRankSum=1.475;VQSLOD=3.3036;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:30:41.74:0,42,568	0/0:10,0:8:21.04:0,21,212	0/0:12,0:9:11.42:0,11,91	0/0:12,0:6:11.89:0,12,101	0/0:25,0:22:47.04:0,47,478	0/0:16,0:14:17.87:0,18,167	0/0:19,0:18:45.07:0,45,445	0/0:21,0:21:36.67:0,37,518	0/0:10,1:11:11.20:0,11,167	1/1:7,14:20:44.64:339,45,0	1/1:2,14:16:26.77:208,27,0	0/0:14,1:14:9.79:0,10,264	0/0:11,0:11:30.02:0,30,293	0/1:9,1:9:8.30:8,0,107	0/0:10,0:10:24.05:0,24,244	1/1:2,7:10:22.95:168,23,0	0/0:38,0:34:81.08:0,81,800	1/1:6,10:11:29.89:232,30,0	0/0:16,1:17:17.97:0,18,386	0/0:24,0:21:40.59:0,41,372	0/0:12,0:10:18.04:0,18,183	0/1:13,1:13:11.96:12,0,207	0/0:12,1:13:12.81:0,13,300	0/0:31,0:29:66.98:0,67,661	1/1:1,9:10:23.90:186,24,0	0/0:23,0:20:48.91:0,49,472	0/0:20,0:19:32.66:0,33,315	0/0:7,0:6:14.98:0,15,136
chr10	89993864	.	A	AAAAC	2934.05	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.560;DP=673;FS=0.589;HRun=0;HaplotypeScore=109.9123;InbreedingCoeff=0.9951;MQ=58.29;MQ0=6;MQRankSum=-0.080;QD=38.10;ReadPosRankSum=-0.224;VQSLOD=3.5989;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:66.15:0,66,980	1/1:2,8:10:24.08:578,24,0	0/0:45,0:28:33.03:0,33,428	0/0:23,0:15:21.04:0,21,316	0/0:38,0:38:78.27:0,78,1274	0/0:22,0:22:45.15:0,45,735	0/0:27,0:27:51.14:0,51,783	0/0:37,0:37:54.18:0,54,859	0/0:13,0:13:27.09:0,27,441	0/0:33,0:32:72.24:0,72,1144	0/0:25,0:25:50.43:0,50,779	0/0:24,0:24:54.17:0,54,855	0/0:16,0:16:36.12:0,36,585	0/0:17,0:17:42.14:0,42,684	1/1:12,11:25:36.12:831,36,0	0/0:19,0:19:48.16:0,48,763	1/1:15,27:41:68.93:1667,69,0	0/0:31,0:31:51.10:0,51,754	0/0:18,0:18:33.10:0,33,516	0/0:20,0:18:39.12:0,39,615	0/0:26,0:26:54.18:0,54,860	0/0:25,0:25:66.21:0,66,1033	0/0:14,0:14:36.11:0,36,566	0/0:31,0:31:69.15:0,69,1127	0/0:17,0:17:29.77:0,30,452	0/0:23,0:23:51.17:0,51,811	0/0:14,0:14:27.07:0,27,396	0/0:9,0:9:21.07:0,21,343
chr10	89994255	.	GA	G	1281.36	PASS	AB=0.845;AC=12;AF=0.214;AN=56;BaseQRankSum=8.652;DP=507;FS=4.357;HRun=11;HaplotypeScore=52.3428;InbreedingCoeff=0.7150;MQ=70.70;MQ0=0;MQRankSum=-0.126;QD=12.94;ReadPosRankSum=0.238;VQSLOD=3.3302;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,4:40:14.09:0,14,715	0/0:11,0:11:30.06:0,30,308	0/1:8,1:9:21.43:21,0,76	0/0:15,0:13:22.42:0,22,243	0/0:16,0:16:30.05:0,30,301	0/0:13,1:14:8.42:0,8,281	0/0:19,1:21:19.63:0,20,449	0/0:24,0:24:39.08:0,39,405	0/0:21,0:21:60.15:0,60,639	1/1:5,18:23:44.90:369,45,0	1/1:3,8:11:20.97:172,21,0	0/0:14,1:15:17.46:0,17,391	0/1:5,1:6:9.64:10,0,102	0/0:22,0:22:60.14:0,60,632	0/0:21,0:22:47.95:0,48,494	1/1:3,13:16:38.95:320,39,0	0/0:24,0:24:66.13:0,66,692	1/1:2,19:21:44.94:369,45,0	0/0:12,1:13:2.42:0,2,231	0/0:14,0:14:24.05:0,24,250	0/0:31,4:35:7.24:0,7,673	0/0:11,0:11:25.31:0,25,259	0/0:16,0:16:30.06:0,30,313	0/0:23,0:23:63.16:0,63,672	1/1:3,9:12:23.95:197,24,0	0/0:20,2:23:7.72:0,8,477	0/0:17,0:21:44.61:0,45,426	0/0:7,0:7:15.02:0,15,151
chr10	89995159	.	G	GCTGTGC	1951.05	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-1.115;DP=552;FS=0.783;HRun=0;HaplotypeScore=123.3336;InbreedingCoeff=0.8797;MQ=78.85;MQ0=9;MQRankSum=-3.312;QD=22.69;ReadPosRankSum=-2.170;VQSLOD=3.0121;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:87.27:0,87,1766	0/0:11,0:11:30.10:0,30,629	0/0:27,0:17:35.50:0,36,736	0/0:39,0:26:47.94:0,48,816	0/0:19,0:19:48.15:0,48,1014	0/0:18,0:18:54.19:0,54,1229	0/0:24,0:23:42.14:0,42,932	0/0:26,0:25:54.17:0,54,1169	0/0:24,0:24:48.09:0,48,1004	1/1:5,15:23:48.16:1328,48,0	1/1:3,11:14:3.01:72,3,0	0/0:12,0:12:30.09:0,30,643	0/0:13,0:13:17.95:0,18,383	0/0:19,0:19:48.11:0,48,994	0/0:26,0:26:72.23:0,72,1555	1/1:4,18:23:13.55:184,14,0	0/0:23,0:23:51.13:0,51,1006	1/1:3,10:14:18.06:482,18,0	0/0:11,0:11:24.08:0,24,548	0/0:12,0:12:27.08:0,27,573	0/0:14,0:14:39.13:0,39,847	0/0:17,0:16:35.85:0,36,809	0/0:17,0:17:39.13:0,39,849	0/0:29,0:28:69.23:0,69,1354	1/1:4,8:12:3.01:41,3,0	0/0:24,0:24:54.13:0,54,1124	0/0:24,0:24:60.19:0,60,1249	0/0:3,0:3:6.02:0,6,129
chr10	89995165	.	C	CGA	1655.59	PASS	AB=0.895;AC=32;AF=0.615;AN=52;BaseQRankSum=-0.327;DP=607;FS=16.714;HRun=0;HaplotypeScore=95.7850;InbreedingCoeff=-0.0840;MQ=73.99;MQ0=11;MQRankSum=-1.997;QD=3.27;ReadPosRankSum=-2.005;VQSLOD=0.1997;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:44,0:44:35.99:350,36,0	1/1:12,0:12:9.01:111,9,0	./.	0/1:36,0:23:0:0,0,0	0/1:23,0:24:5.25:49,0,5	0/0:19,0:19:6.01:0,6,61	0/0:19,4:23:3:0,3,33	1/1:24,0:23:2.13:5,2,0	0/1:16,7:24:34.13:76,0,34	1/1:20,0:20:8.06:46,8,0	./.	0/1:11,1:17:23.02:65,0,23	0/1:10,9:19:1.85:62,0,2	0/1:18,0:18:70.82:97,0,71	0/1:26,4:30:27.01:27,0,85	1/1:24,0:24:3.01:32,3,0	0/1:19,10:29:11.88:199,0,12	0/1:14,0:14:0:0,0,0	1/1:13,0:13:2.98:22,3,0	0/1:18,0:18:22.81:62,0,23	1/1:17,0:17:8.99:75,9,0	0/1:19,0:19:5.11:40,0,5	0/0:18,0:18:6.01:0,6,63	0/1:21,10:31:83.42:193,0,83	0/1:11,0:11:0:0,0,0	1/1:30,0:30:17.09:138,17,0	0/1:25,1:26:12.26:119,0,12	1/1:3,0:3:3.88:26,4,0
chr10	89996672	.	GTT	G	2430.05	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.931;DP=548;FS=0.000;HRun=13;HaplotypeScore=71.9443;InbreedingCoeff=0.9260;MQ=68.07;MQ0=7;MQRankSum=1.204;QD=20.95;ReadPosRankSum=2.505;VQSLOD=3.2437;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:35:98.21:0,98,1322	0/0:2,0:12:20.98:0,21,215	0/0:28,0:11:8.54:0,9,106	0/0:21,0:13:1.94:0,2,235	0/0:30,0:31:72.05:0,72,967	0/0:20,0:21:59.67:0,60,814	0/0:8,0:10:27.09:0,27,376	0/0:28,0:27:50.59:0,51,641	0/0:19,0:19:41.61:0,42,555	1/1:7,24:31:51.94:648,52,0	1/1:2,13:15:41.78:389,42,0	0/0:15,0:15:42.12:0,42,584	0/0:12,0:15:33.11:0,33,462	0/0:13,0:15:37.93:0,38,465	0/0:2,0:14:22.86:0,23,188	1/1:2,9:13:14.88:245,15,0	0/0:7,0:21:33.05:0,33,315	1/1:3,16:19:45.06:436,45,0	0/0:19,0:21:56.09:0,56,663	0/0:23,0:25:59.67:0,60,796	0/0:14,0:14:24.53:0,25,323	0/0:6,0:8:24.06:0,24,299	0/0:3,0:4:11.53:0,12,139	0/0:20,0:20:42.14:0,42,606	1/1:1,35:37:92.87:885,93,0	0/0:11,0:12:36.10:0,36,487	0/0:22,0:21:57.15:0,57,799	0/0:17,0:18:50.14:0,50,666
chr10	89997341	.	CT	C	1294.21	PASS	AB=0.856;AC=12;AF=0.214;AN=56;BaseQRankSum=6.490;DP=398;FS=2.334;HRun=12;HaplotypeScore=46.0659;InbreedingCoeff=0.7212;MQ=70.90;MQ0=1;MQRankSum=0.686;QD=12.10;ReadPosRankSum=2.174;VQSLOD=3.2562;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,1:36:75.57:0,76,887	0/0:2,0:2:6.01:0,6,61	0/0:15,0:13:2.09:0,2,71	0/0:12,0:11:16.62:0,17,185	0/0:11,0:11:24.05:0,24,244	0/0:12,0:12:27.05:0,27,274	0/1:11,3:14:36.62:37,0,205	0/0:27,0:27:54.07:0,54,529	0/0:12,0:12:30.03:0,30,295	1/1:6,11:17:29.82:227,30,0	1/1:0,14:14:38.84:302,39,0	0/0:18,0:18:33.92:0,34,328	0/0:8,0:8:24.04:0,24,238	0/1:7,1:8:2.20:2,0,162	0/0:18,0:18:42.04:0,42,411	1/1:4,15:18:41.83:325,42,0	0/0:25,0:25:63.05:0,63,614	1/1:7,19:26:59.70:460,60,0	0/0:12,1:14:9.66:0,10,265	0/0:13,0:13:33.07:0,33,335	0/0:8,0:8:15.01:0,15,145	0/0:6,0:6:9.02:0,9,91	0/0:11,0:11:24.02:0,24,231	0/0:8,0:7:18.04:0,18,183	1/1:2,7:9:14.94:116,15,0	0/0:14,0:14:27.94:0,28,276	0/0:19,0:19:48.08:0,48,476	0/0:2,0:2:6.01:0,6,61
chr10	89998514	.	A	AAAGG	3733.60	PASS	AC=42;AF=0.778;AN=54;BaseQRankSum=-6.938;DP=330;FS=4.672;HRun=0;HaplotypeScore=73.7508;InbreedingCoeff=0.8027;MQ=36.11;MQ0=1;MQRankSum=0.078;QD=13.29;ReadPosRankSum=-1.066;VQSLOD=2.2278;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:8.91:64,9,0	1/1:7,0:7:14.91:136,15,0	./.	0/0:1,0:1:2.99:0,3,23	1/1:16,0:16:24.16:207,24,0	1/1:11,0:11:17.92:256,18,0	1/1:15,0:15:26.77:203,27,0	1/1:16,0:14:17.79:121,18,0	1/1:18,0:18:38.69:328,39,0	0/0:15,0:15:24.18:0,24,174	0/0:8,0:8:0.92:0,1,85	1/1:9,0:8:17.80:135,18,0	1/1:8,0:8:14.91:115,15,0	1/1:13,0:13:17.80:135,18,0	1/1:15,0:15:29.54:188,30,0	0/0:10,0:10:23.50:0,24,153	1/1:16,0:16:17.82:128,18,0	0/0:7,0:7:8.30:0,8,50	1/1:22,0:22:26.89:258,27,0	1/1:19,0:19:38.23:297,38,0	1/1:9,0:9:11.96:95,12,0	1/1:9,0:9:11.91:136,12,0	1/1:11,0:11:17.90:144,18,0	1/1:10,1:11:14.14:145,14,0	0/0:7,0:7:8.68:0,9,50	1/1:18,0:17:29.73:254,30,0	1/1:20,1:21:34.76:319,35,0	1/1:2,6:8:3.01:72,3,0
chr10	89999836	.	TAAA	T	1005	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=2.156;DP=468;FS=32.626;HRun=12;HaplotypeScore=76.2805;InbreedingCoeff=0.6140;MQ=60.74;MQ0=7;MQRankSum=1.708;QD=15.95;ReadPosRankSum=5.603;VQSLOD=-0.1260;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,45:51:87.21:1099,87,0	0/0:6,0:6:9.75:0,10,67	0/0:20,0:5:12.08:0,12,69	0/0:22,0:11:12.14:0,12,101	0/0:32,0:35:92.94:0,93,1360	0/0:10,0:12:33.06:0,33,462	0/0:17,0:17:41.33:0,41,678	0/0:26,0:26:64.84:0,65,911	0/0:8,0:8:24.06:0,24,375	0/0:14,0:14:26.26:0,26,201	0/0:11,0:13:23.37:0,23,172	0/0:9,0:9:26.87:0,27,310	0/0:12,0:12:34.19:0,34,347	0/0:13,0:13:33.06:0,33,476	0/0:16,0:16:22.99:0,23,175	0/0:6,0:5:8.98:0,9,78	0/1:12,0:11:4.95:5,0,51	0/0:12,0:12:23.91:0,24,194	0/0:16,0:17:39.04:0,39,432	0/0:15,0:18:41.80:0,42,483	0/0:12,0:12:30.06:0,30,415	0/0:20,0:20:51.12:0,51,768	0/0:13,0:13:36.07:0,36,575	0/0:34,0:34:93:0,93,1378	0/0:9,0:9:14.44:0,14,97	0/0:15,0:15:33.06:0,33,429	0/0:10,0:13:33.05:0,33,467	0/0:11,0:11:23.93:0,24,300
chr10	89999846	.	A	AG	582.79	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-1.534;DP=518;FS=6.441;HRun=0;HaplotypeScore=73.9523;InbreedingCoeff=0.8148;MQ=59.39;MQ0=10;MQRankSum=-1.552;QD=7.11;ReadPosRankSum=2.717;VQSLOD=2.7362;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:91.35:0,91,478	1/1:0,10:10:15.04:169,15,0	0/1:26,0:7:22.78:23,0,138	0/0:24,0:13:25.14:0,25,221	0/0:37,0:37:98.09:0,98,1120	0/0:15,0:15:37.07:0,37,435	0/0:21,0:21:39.27:0,39,699	0/0:31,0:29:81.58:0,82,960	0/0:10,0:10:30.07:0,30,368	0/0:10,0:10:22.55:0,23,155	0/0:14,0:14:22.68:0,23,146	0/0:10,0:10:26.64:0,27,288	0/0:13,0:13:32.94:0,33,367	0/0:11,0:11:33.06:0,33,392	1/1:1,28:29:30.08:344,30,0	0/0:7,0:6:14.82:0,15,120	1/1:3,14:15:13.13:192,13,0	0/0:13,0:13:29.05:0,29,213	0/0:18,0:18:32.72:0,33,450	0/0:16,0:16:37.10:0,37,414	0/0:12,0:12:36.07:0,36,405	0/0:23,0:23:63.16:0,63,773	0/0:12,0:12:36.10:0,36,464	0/0:33,0:33:96.02:0,96,1190	0/0:15,0:15:38.02:0,38,264	0/0:17,0:17:51.09:0,51,543	0/0:17,0:17:43.65:0,44,487	0/0:8,0:8:22.60:0,23,257
chr10	89999895	.	T	TA	2439.63	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=1.513;DP=531;FS=3.991;HRun=3;HaplotypeScore=62.6313;InbreedingCoeff=0.9901;MQ=81.25;MQ0=0;MQRankSum=-1.602;QD=39.99;ReadPosRankSum=1.566;VQSLOD=3.6829;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,135,1825	0/0:9,0:9:15.05:0,15,209	0/0:23,0:22:63.16:0,63,826	0/0:15,0:13:33.11:0,33,451	0/0:29,0:29:84.26:0,84,1140	0/0:15,0:15:45.15:0,45,624	0/0:29,0:29:84.28:0,84,1174	0/0:33,0:33:96.31:0,96,1313	0/0:14,0:14:42.13:0,42,572	1/1:0,13:13:39.12:601,39,0	1/1:0,13:13:36.04:544,36,0	0/0:13,0:13:34.32:0,34,500	0/0:10,0:10:30.10:0,30,415	0/0:9,0:9:27.08:0,27,362	0/0:30,0:30:36.09:0,36,494	1/1:0,6:6:18.06:287,18,0	0/0:28,0:27:66.21:0,66,906	1/1:0,12:12:30.10:478,30,0	0/0:26,0:26:78.23:0,78,1034	0/0:14,0:14:42.14:0,42,587	0/0:14,0:14:42.13:0,42,571	0/0:18,0:18:51.17:0,51,713	0/0:12,0:12:36.11:0,36,478	0/0:26,0:26:78.25:0,78,1075	1/1:0,17:17:48.01:704,48,0	0/0:24,0:24:69.23:0,69,964	0/0:24,0:24:69.23:0,69,963	0/0:5,0:5:15.05:0,15,209
chr10	90000200	.	T	TG	1164.39	PASS	AB=0.694;AC=7;AF=0.125;AN=56;BaseQRankSum=9.094;DP=536;FS=0.480;HRun=0;HaplotypeScore=75.0402;InbreedingCoeff=0.5358;MQ=63.92;MQ0=2;MQRankSum=-1.981;QD=13.08;ReadPosRankSum=5.215;VQSLOD=3.9250;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:55.13:0,55,630	0/0:5,0:5:14.99:0,15,133	0/0:30,0:8:11.58:0,12,124	0/0:19,0:11:4.72:0,5,81	0/0:23,0:23:57.13:0,57,449	0/0:16,0:16:40.48:0,40,350	0/0:12,0:12:32.09:0,32,306	0/0:28,0:28:62.55:0,63,523	0/0:13,0:13:38.21:0,38,328	0/1:9,8:17:53.32:220,0,53	0/1:9,7:16:3.74:168,0,4	0/0:20,0:20:59.81:0,60,563	0/0:13,0:12:34.23:0,34,249	0/0:20,0:20:56.08:0,56,485	0/0:15,0:15:39:0,39,364	1/1:10,7:17:21.04:322,21,0	0/0:29,0:29:79.11:0,79,678	1/1:16,11:27:65.35:506,65,0	0/0:44,0:43:99:0,109,936	0/0:13,0:13:38.95:0,39,356	0/0:16,0:15:29:0,29,260	0/0:16,0:16:41.20:0,41,376	0/0:18,0:18:53.65:0,54,504	0/0:19,0:19:52.29:0,52,498	0/1:7,5:12:85.61:91,0,86	0/0:16,0:15:41.38:0,41,394	0/0:24,0:24:66.90:0,67,659	0/0:10,0:10:26.99:0,27,258
chr10	90000204	.	T	TTTG	1464.37	PASS	AB=0.720;AC=9;AF=0.161;AN=56;BaseQRankSum=9.288;DP=549;FS=2.353;HRun=0;HaplotypeScore=93.5183;InbreedingCoeff=0.8516;MQ=64.74;MQ0=2;MQRankSum=-1.014;QD=16.64;ReadPosRankSum=4.356;VQSLOD=3.4406;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:76.18:0,76,677	0/0:6,0:6:15.89:0,16,160	0/0:34,0:10:10.80:0,11,102	0/0:19,0:11:14.96:0,15,108	0/0:24,0:24:60.50:0,61,501	0/0:18,0:18:45.50:0,45,415	0/0:12,0:12:32.91:0,33,379	0/0:29,0:29:65.29:0,65,562	0/0:13,0:13:38.04:0,38,341	0/1:11,7:18:17.06:333,0,17	1/1:9,7:16:25.96:284,26,0	0/0:20,0:20:56.89:0,57,592	0/0:13,0:12:31.51:0,32,247	0/0:22,0:22:59.44:0,59,517	0/0:16,0:16:38.73:0,39,380	1/1:9,6:15:24.89:289,25,0	0/0:30,0:30:86.70:0,87,808	1/1:21,7:28:49.74:522,50,0	0/0:45,0:44:99:0,112,1026	0/0:13,0:13:38.94:0,39,380	0/0:14,0:13:22.88:0,23,212	0/0:14,0:14:38.31:0,38,385	0/0:19,0:19:54.03:0,54,541	0/0:19,0:19:52.56:0,53,499	1/1:7,4:11:20.93:201,21,0	0/0:17,0:16:30.48:0,30,423	0/0:24,0:24:68.04:0,68,740	0/0:12,0:12:35.49:0,35,329
chr10	90000281	.	G	GA	1701.47	PASS	AB=0.950;AC=16;AF=0.286;AN=56;BaseQRankSum=-5.862;DP=494;FS=21.072;HRun=11;HaplotypeScore=57.7681;InbreedingCoeff=0.5592;MQ=70.75;MQ0=0;MQRankSum=-0.111;QD=10.91;ReadPosRankSum=1.424;VQSLOD=1.1328;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:34:55.92:0,56,619	0/0:9,0:9:23.89:0,24,184	1/1:11,0:11:2.10:35,2,0	0/0:7,1:6:2.94:0,3,21	0/0:13,0:13:29.83:0,30,230	0/0:23,1:24:37.33:0,37,461	0/0:18,2:21:16.39:0,16,297	0/0:18,0:18:35.84:0,36,277	0/0:21,0:22:55.76:0,56,416	1/1:6,11:17:32.64:307,33,0	1/1:4,9:13:6.96:251,7,0	0/0:22,0:22:50.46:0,50,382	0/0:9,0:9:26.90:0,27,209	0/0:15,2:17:10.43:0,10,251	0/0:22,0:23:57.85:0,58,428	1/1:1,12:14:17.20:207,17,0	0/0:37,1:40:73.07:0,73,722	1/1:0,29:30:84:836,84,0	0/0:13,0:14:37.89:0,38,282	0/0:17,0:19:46.81:0,47,348	0/0:18,0:18:49.80:0,50,373	0/1:10,0:10:12.51:13,0,98	0/1:9,1:10:6.53:7,0,139	0/1:17,1:18:7.08:7,0,311	1/1:3,11:15:3.17:202,3,0	0/0:12,0:13:34.90:0,35,261	0/1:16,1:17:10.23:10,0,257	0/0:14,0:14:27.32:0,27,262
chr10	90000515	.	AT	A	430.84	PASS	AB=0.850;AC=4;AF=0.071;AN=56;BaseQRankSum=1.773;DP=465;FS=3.977;HRun=12;HaplotypeScore=80.2738;InbreedingCoeff=0.3336;MQ=61.31;MQ0=13;MQRankSum=0.944;QD=6.34;ReadPosRankSum=0.073;VQSLOD=2.4213;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,23:33:38.24:477,38,0	0/0:1,0:2:5.68:0,6,29	0/0:17,0:13:0.05:0,0,153	0/0:10,0:5:0:0,0,0	0/0:18,0:18:39.08:0,39,396	0/0:22,1:23:21.80:0,22,386	0/0:17,0:16:26.98:0,27,248	0/0:15,1:14:3.82:0,4,220	0/0:15,0:15:36.06:0,36,359	0/0:13,0:13:14.81:0,15,66	0/0:17,0:16:21.23:0,21,92	0/0:18,1:18:12.83:0,13,305	0/0:10,0:10:24:0,24,226	0/0:12,0:13:20.34:0,20,242	0/0:1,0:7:14.20:0,14,71	0/0:7,0:6:10.41:0,10,42	0/0:10,0:31:62.99:0,63,362	0/0:17,0:15:10.71:0,11,45	0/1:12,4:16:56.91:57,0,198	0/1:16,2:18:4.44:4,0,312	0/0:9,0:8:15.03:0,15,152	0/0:2,0:3:5.84:0,6,45	0/0:18,1:19:24.82:0,25,423	0/0:23,1:22:19.05:0,19,373	0/0:25,0:22:32.14:0,32,136	0/0:23,1:24:39.83:0,40,565	0/0:28,0:28:63.01:0,63,603	0/0:8,1:10:6.72:0,7,235
chr10	90000518	.	T	TATTTATTTATTTA	7758.10	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-7.670;DP=465;FS=15.672;HRun=0;HaplotypeScore=151.1520;InbreedingCoeff=0.8971;MQ=59.14;MQ0=15;MQRankSum=-5.966;QD=83.42;ReadPosRankSum=3.967;VQSLOD=3.5278;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:81.23:0,81,2373	0/0:3,0:2:6.02:0,6,211	0/0:18,0:13:31.66:0,32,622	0/0:9,0:4:2.94:0,3,18	0/0:18,0:18:51.10:0,51,1731	0/0:21,0:21:60.17:0,60,1938	0/0:16,0:15:39.04:0,39,1059	0/0:15,0:13:39.09:0,39,1243	0/0:14,0:14:39.13:0,39,1423	1/1:1,7:15:42.12:2101,42,0	1/1:2,8:21:17.51:1727,18,0	0/0:19,0:18:51.08:0,51,1590	0/0:11,0:11:33.02:0,33,822	0/0:12,0:12:36.08:0,36,1220	0/0:8,0:8:18.01:0,18,466	1/1:3,4:8:12.01:778,12,0	0/0:31,0:29:78.25:0,78,2424	1/1:3,7:16:15.05:818,15,0	0/0:15,0:15:45.15:0,45,1508	0/0:16,0:16:45.15:0,45,1690	0/0:8,0:7:15.05:0,15,619	0/0:3,0:3:5.98:0,6,230	0/0:18,0:18:51.09:0,51,1838	0/0:23,0:21:60.10:0,60,1912	1/1:2,20:26:36.12:2335,36,0	0/0:24,0:24:69.15:0,69,2455	0/0:26,0:26:74.77:0,75,2259	0/0:11,0:10:30.10:0,30,1122
chr10	90001190	.	C	CA	1498.92	PASS	AB=0.832;AC=29;AF=0.518;AN=56;BaseQRankSum=-7.428;DP=491;FS=0.616;HRun=16;HaplotypeScore=82.1091;InbreedingCoeff=0.2373;MQ=47.32;MQ0=19;MQRankSum=3.826;QD=4.49;ReadPosRankSum=-2.973;VQSLOD=0.7634;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,6:46:7.12:230,7,0	0/0:5,0:7:8.97:0,9,34	0/1:8,0:4:4.10:15,0,4	0/1:4,0:2:3.16:4,0,3	1/1:21,4:24:18.94:226,19,0	1/1:4,9:13:1.60:103,2,0	1/1:6,4:9:5.99:48,6,0	0/1:18,3:18:17.83:57,0,18	1/1:13,2:15:15.57:98,16,0	0/0:8,0:23:25.93:0,26,72	0/0:7,0:19:15.66:0,16,44	0/1:7,1:7:1.32:19,0,1	1/1:8,3:11:5.79:37,6,0	1/1:8,2:10:5.69:66,6,0	0/0:14,0:19:21.10:0,21,69	0/0:1,0:9:10.66:0,11,30	0/0:20,0:30:26.67:0,27,83	0/0:10,0:12:6.13:0,6,16	0/1:12,4:13:7.41:39,0,7	1/1:10,5:16:16.23:120,16,0	0/1:5,2:6:14.45:16,0,14	0/1:11,4:19:7.58:112,0,8	0/1:13,3:17:14.09:59,0,14	0/1:9,7:15:1.79:81,0,2	0/0:5,0:15:18.08:0,18,50	0/1:19,5:23:34.21:126,0,34	1/1:16,3:20:14.51:91,15,0	0/1:15,6:18:10.04:129,0,10
chr10	90001591	.	A	AAAAAAAG	2335.32	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=3.833;DP=502;FS=12.202;HRun=0;HaplotypeScore=147.0357;InbreedingCoeff=0.7015;MQ=43.98;MQ0=23;MQRankSum=-1.261;QD=16.33;ReadPosRankSum=-2.191;VQSLOD=1.6127;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:67.96:0,68,488	0/0:10,0:8:17.20:0,17,109	0/0:16,0:4:2.99:0,3,23	0/0:7,0:1:3.01:0,3,70	0/0:22,0:21:30.55:0,31,189	0/0:10,0:9:14.98:0,15,192	0/0:15,0:13:20.77:0,21,186	0/0:24,0:23:31.28:0,31,242	0/0:14,0:14:22.09:0,22,238	1/1:33,0:28:37.26:627,37,0	1/1:13,0:11:20.94:307,21,0	0/0:11,0:10:17.80:0,18,123	0/0:6,0:6:8.88:0,9,58	0/0:18,0:18:30.18:0,30,239	0/0:15,0:15:21.33:0,21,191	1/1:11,0:10:23.91:451,24,0	0/0:24,0:23:23.82:0,24,378	1/1:20,6:23:23.80:475,24,0	0/1:24,0:23:16.41:16,0,221	0/0:21,0:19:23.11:0,23,232	0/0:16,0:14:11.85:0,12,121	0/0:10,0:10:23.74:0,24,203	0/0:16,0:15:15.80:0,16,133	0/1:15,0:15:51.04:51,0,74	1/1:21,0:18:35.97:586,36,0	0/0:29,0:27:25.07:0,25,340	0/0:24,0:24:42.25:0,42,370	0/0:12,0:11:26.95:0,27,293
chr10	90002554	.	AAAACAAAC	A	4089.33	PASS	AB=0.625;AC=9;AF=0.161;AN=56;BaseQRankSum=10.925;DP=755;FS=0.000;HRun=0;HaplotypeScore=185.6496;InbreedingCoeff=0.8651;MQ=54.28;MQ0=4;MQRankSum=-7.683;QD=38.95;ReadPosRankSum=-1.852;VQSLOD=2.7003;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:63:99:0,154,5759	0/0:9,0:9:18.06:0,18,695	0/0:26,0:14:36.12:0,36,968	0/0:32,0:19:36.12:0,36,1136	0/0:22,0:22:57.20:0,57,2183	0/0:25,0:25:65.20:0,65,2209	0/0:27,0:27:63.20:0,63,2088	0/0:33,0:33:75.25:0,75,2185	0/0:32,0:33:92.13:0,92,3476	1/1:9,27:36:75.21:1612,75,0	1/1:4,14:17:36.12:755,36,0	0/0:23,0:24:60.19:0,60,2178	0/0:26,0:26:66.23:0,66,2506	0/0:26,0:26:60.19:0,60,2119	0/0:28,0:28:63.22:0,63,2246	1/1:11,13:24:48.16:1128,48,0	0/0:37,0:37:78.27:0,78,2839	1/1:10,7:17:12.04:261,12,0	0/0:22,0:21:33.11:0,33,1181	0/0:16,0:16:36.12:0,36,1385	0/0:39,0:39:96.33:0,96,3601	0/0:20,0:20:20.93:0,21,1892	0/0:15,0:15:30.10:0,30,880	0/0:56,0:63:99:0,141,5121	0/1:4,6:10:11.27:333,0,11	0/0:30,0:30:66.22:0,66,2282	0/0:23,0:22:66.23:0,66,2708	0/0:11,0:11:21.07:0,21,860
chr10	90002657	.	GAC	G	3007.76	PASS	AB=0.882;AC=23;AF=0.411;AN=56;BaseQRankSum=9.021;DP=833;FS=2.203;HRun=0;HaplotypeScore=111.9940;InbreedingCoeff=0.0029;MQ=62.76;MQ0=6;MQRankSum=1.406;QD=5.74;ReadPosRankSum=1.239;VQSLOD=3.2131;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,7:43:82.27:82,0,715	0/0:8,0:11:8.60:0,9,52	0/0:42,0:25:9.03:0,9,125	0/0:43,0:26:20.74:0,21,252	0/1:24,3:27:14.47:14,0,687	0/1:26,3:30:19.59:20,0,771	0/0:28,0:28:13.80:0,14,636	0/0:39,2:41:2.11:0,2,709	0/0:25,2:27:13.82:0,14,614	1/1:15,11:26:50.74:531,51,0	1/1:9,12:23:40.62:468,41,0	0/1:21,3:24:60.86:61,0,445	0/1:22,4:26:63.87:64,0,424	0/0:27,0:28:16.84:0,17,668	0/0:12,0:37:40.64:0,41,304	1/1:9,24:34:60:666,60,0	0/0:21,0:31:22.51:0,23,179	1/1:4,16:21:38.08:423,38,0	0/1:23,1:23:4.27:4,0,352	0/1:25,4:29:40.98:41,0,701	0/1:48,5:52:68.42:68,0,1339	0/1:23,3:27:14.49:14,0,639	0/1:26,3:30:28.82:29,0,616	0/1:35,2:37:22.94:23,0,857	1/1:9,10:20:41.80:431,42,0	0/1:22,5:27:99:120,0,504	0/0:19,1:20:4.81:0,5,522	0/1:15,6:20:99:129,0,375
chr10	90003035	.	CAGAG	C	3816.68	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.751;DP=653;FS=0.944;HRun=0;HaplotypeScore=109.1201;InbreedingCoeff=0.9989;MQ=67.91;MQ0=1;MQRankSum=-3.447;QD=39.35;ReadPosRankSum=3.386;VQSLOD=4.0486;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.33:0,96,2340	0/0:7,0:7:21.06:0,21,474	0/0:32,0:29:60.04:0,60,1517	0/0:19,0:19:44.46:0,44,887	0/0:31,0:31:72.25:0,72,1809	0/0:32,0:32:81.24:0,81,1971	0/0:16,0:16:45.14:0,45,1065	0/0:35,0:35:90.30:0,90,2171	0/0:22,0:22:57.20:0,57,1377	1/1:3,24:26:63.21:1079,63,0	1/1:0,19:19:42.14:741,42,0	0/0:17,0:17:48.16:0,48,1178	0/0:17,0:17:48.16:0,48,1190	0/0:13,0:13:33.11:0,33,831	0/0:21,0:21:57.18:0,57,1405	1/1:1,16:16:42.14:725,42,0	0/0:26,0:26:63.22:0,63,1577	1/1:0,15:15:36.12:636,36,0	0/0:25,0:24:63.22:0,63,1521	0/0:27,0:27:78.24:0,78,1821	0/0:26,0:25:63.20:0,63,1470	0/0:29,0:29:78.27:0,78,1888	0/0:28,0:28:72.25:0,72,1816	0/0:19,0:19:42.13:0,42,1024	1/1:4,15:19:36.12:636,36,0	0/0:35,1:36:40.44:0,40,2193	0/0:29,0:29:81.28:0,81,2035	0/0:13,0:13:39.13:0,39,924
chr10	90003179	.	CCCCT	C	2831.05	PASS	AB=0.732;AC=10;AF=0.179;AN=56;BaseQRankSum=9.699;DP=545;FS=10.285;HRun=0;HaplotypeScore=90.5689;InbreedingCoeff=0.7547;MQ=77.29;MQ0=0;MQRankSum=-3.973;QD=28.31;ReadPosRankSum=0.159;VQSLOD=2.9642;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,3758	0/0:10,0:10:30.08:0,30,742	0/0:21,0:20:57.18:0,57,1311	0/0:21,0:21:44.19:0,44,976	0/0:19,0:19:51.17:0,51,1356	0/0:30,0:30:81.28:0,81,2132	0/0:21,0:21:60.21:0,60,1598	0/0:20,0:19:60.19:0,60,1536	0/0:25,0:25:75.24:0,75,1906	1/1:2,10:12:27.05:439,27,0	1/1:2,15:17:42.10:731,42,0	0/0:14,0:14:39.13:0,39,1040	0/0:13,0:13:39.13:0,39,1040	0/0:16,0:16:45.15:0,45,1187	0/0:17,0:17:48.16:0,48,1278	0/1:2,15:17:34.88:739,0,35	0/0:24,0:24:72.25:0,72,1873	1/1:1,15:16:36.12:672,36,0	0/0:19,0:19:54.14:0,54,1357	0/0:15,0:15:39.10:0,39,928	0/0:35,0:35:99:0,102,2691	0/0:11,0:11:33.11:0,33,867	0/0:13,0:13:39.12:0,39,974	0/0:21,0:21:63.22:0,63,1666	1/1:1,9:10:21.07:392,21,0	0/1:26,2:28:27.68:28,0,1918	0/0:22,0:21:63.22:0,63,1651	0/0:8,0:8:24.08:0,24,632
chr10	90003437	.	T	TA	1668.52	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=11.810;DP=505;FS=1.026;HRun=0;HaplotypeScore=65.5890;InbreedingCoeff=0.8748;MQ=66.86;MQ0=5;MQRankSum=-4.436;QD=16.69;ReadPosRankSum=0.718;VQSLOD=5.7136;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.26:0,93,1259	0/0:14,0:14:42.11:0,42,552	0/1:19,0:7:13.49:13,0,43	0/0:18,0:9:20.18:0,20,150	0/0:25,0:25:75.23:0,75,1010	0/0:25,0:25:75.21:0,75,983	0/0:16,0:16:48.12:0,48,605	0/0:32,0:32:96.28:0,96,1248	0/0:11,0:11:33.09:0,33,421	1/1:3,11:14:41.95:416,42,0	1/1:7,17:24:38.83:490,39,0	0/0:16,0:16:48.16:0,48,661	0/0:11,0:11:33.09:0,33,429	0/0:8,0:8:24.08:0,24,326	0/0:16,0:16:48.13:0,48,623	1/1:2,11:13:17.21:226,17,0	0/0:20,0:20:60.18:0,60,800	1/1:1,16:17:37.42:392,37,0	0/0:18,0:17:51.17:0,51,701	0/0:38,0:38:99:0,111,1468	0/0:8,0:8:9.75:0,10,223	0/0:8,0:8:21.06:0,21,277	0/0:16,0:16:45:0,45,579	0/0:7,0:7:18.06:0,18,251	1/1:2,11:13:26.99:308,27,0	0/0:26,1:27:50.26:0,50,979	0/0:24,0:24:67.46:0,67,901	0/0:16,0:16:48.16:0,48,669
chr10	90003476	.	AAATT	A	2113.24	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.770;DP=496;FS=2.564;HRun=0;HaplotypeScore=103.7677;InbreedingCoeff=0.9928;MQ=64.15;MQ0=0;MQRankSum=-10.417;QD=33.02;ReadPosRankSum=2.030;VQSLOD=3.7423;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,2427	0/0:13,0:13:39.13:0,39,1092	0/0:18,0:18:44.64:0,45,1294	0/0:15,0:14:22.69:0,23,909	0/0:23,0:23:69.24:0,69,1868	0/0:26,0:26:78.27:0,78,2140	0/0:14,0:14:42.14:0,42,1174	0/0:26,0:26:75.25:0,75,1968	0/0:10,0:10:30.10:0,30,840	1/1:2,11:13:33.11:523,33,0	1/1:3,13:16:36.12:540,36,0	0/0:13,0:13:39.13:0,39,1090	0/0:11,0:11:33.11:0,33,923	0/0:12,0:12:36.12:0,36,957	0/0:16,0:16:45.15:0,45,1225	1/1:2,6:8:18.06:276,18,0	0/0:19,0:19:54.19:0,54,1467	1/1:3,9:12:24.08:373,24,0	0/0:24,0:24:72.22:0,72,1818	0/0:43,0:43:99:0,129,3560	0/0:16,0:16:48.16:0,48,1300	0/0:10,0:10:30.09:0,30,738	0/0:25,0:25:72.25:0,72,2014	0/0:5,0:5:15.01:0,15,356	1/1:3,12:15:39.12:576,39,0	0/0:21,0:21:60.21:0,60,1608	0/0:27,0:27:81.28:0,81,2262	0/0:12,0:12:36.08:0,36,886
chr10	90003482	.	GATACCC	G	2769.23	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.521;DP=488;FS=1.872;HRun=0;HaplotypeScore=119.1433;InbreedingCoeff=0.9930;MQ=65.61;MQ0=0;MQRankSum=-10.977;QD=54.30;ReadPosRankSum=2.675;VQSLOD=4.0245;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.30:0,93,3296	0/0:14,0:14:42.14:0,42,1530	0/0:18,0:18:50.02:0,50,1669	0/0:15,0:15:31.42:0,31,936	0/0:24,0:24:69.22:0,69,2420	0/0:27,0:27:81.28:0,81,2968	0/0:18,0:18:51.17:0,51,1825	0/0:24,0:24:72.19:0,72,2260	0/0:10,0:10:30.08:0,30,1012	1/1:0,11:11:33.11:676,33,0	1/1:0,13:13:36.12:706,36,0	0/0:14,0:14:42.14:0,42,1535	0/0:11,0:11:33.11:0,33,1209	0/0:12,0:12:36.12:0,36,1319	0/0:14,0:14:42.13:0,42,1446	1/1:0,6:6:18.06:360,18,0	0/0:22,0:22:60.19:0,60,2111	1/1:0,9:9:24.08:484,24,0	0/0:23,0:23:69.24:0,69,2307	0/0:45,0:45:99:0,132,4765	0/0:16,0:16:48.16:0,48,1748	0/0:8,0:8:24.08:0,24,870	0/0:27,0:27:81.26:0,81,2801	0/0:5,0:5:15.05:0,15,550	1/1:0,12:12:36.12:718,36,0	0/0:19,0:19:57.20:0,57,2078	0/0:28,0:28:84.25:0,84,2846	0/0:12,0:12:36.04:0,36,890
chr10	90004057	.	T	TAAAAAAA	9019.96	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=0.341;DP=550;FS=1.545;HRun=3;HaplotypeScore=121.8184;InbreedingCoeff=0.9970;MQ=72.27;MQ0=1;MQRankSum=-12.502;QD=89.31;ReadPosRankSum=-3.650;VQSLOD=2.4645;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.16:0,96,2139	0/0:10,0:10:27.03:0,27,545	0/0:16,0:16:44.95:0,45,975	0/0:11,0:11:20.20:0,20,470	0/0:33,0:33:99:0,99,2178	0/0:18,0:18:48.16:0,48,1146	0/0:12,0:12:33.04:0,33,714	0/0:28,0:28:72.21:0,72,1586	0/0:17,0:17:51.18:0,51,1222	1/1:5,16:20:54.16:1814,54,0	1/1:2,25:30:72.20:2763,72,0	0/0:20,0:20:57.17:0,57,1318	0/0:21,0:21:57.17:0,57,1311	0/0:15,0:15:45.12:0,45,959	0/0:19,0:19:54.17:0,54,1233	1/1:7,7:15:39.13:1509,39,0	0/0:24,0:24:69.21:0,69,1592	1/1:3,7:11:24.08:868,24,0	0/0:20,0:20:60.17:0,60,1326	0/0:28,0:28:84.29:0,84,2012	0/0:14,0:14:42.11:0,42,889	0/0:12,0:12:36.11:0,36,816	0/0:21,0:21:57.16:0,57,1313	0/0:14,0:14:33.08:0,33,742	1/1:6,15:23:57.20:2066,57,0	0/0:25,0:25:69.21:0,69,1548	0/0:27,0:27:75.21:0,75,1718	0/0:10,0:10:21.06:0,21,503
chr10	90005191	.	AAAAACAAG	A	3005.53	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.259;DP=496;FS=3.780;HRun=0;HaplotypeScore=132.5605;InbreedingCoeff=0.9751;MQ=67.05;MQ0=2;MQRankSum=-5.602;QD=41.17;ReadPosRankSum=-4.384;VQSLOD=2.5820;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.15:0,93,3037	0/0:9,0:9:27.09:0,27,766	0/0:22,0:16:31.96:0,32,692	0/0:17,0:12:6.11:0,6,191	0/0:24,0:24:69.21:0,69,2505	0/0:9,0:9:27.09:0,27,940	0/0:14,0:14:42.14:0,42,1333	0/0:26,0:25:60.06:0,60,1803	0/0:18,0:18:44.99:0,45,1584	1/1:13,1:14:33.06:488,33,0	1/1:13,4:17:44.69:699,45,0	0/0:15,0:15:42.08:0,42,1457	0/0:11,0:11:33.11:0,33,1180	0/0:15,0:15:42.09:0,42,1471	0/0:21,0:21:63.19:0,63,1807	1/1:4,5:8:24.08:555,24,0	0/0:29,0:29:81.20:0,81,2382	1/1:19,0:19:51.10:803,51,0	0/0:15,0:15:33.01:0,33,1019	0/0:20,0:20:54.09:0,54,1779	0/0:13,0:13:39.12:0,39,1306	0/0:18,0:18:51.11:0,51,1700	0/0:13,0:13:39.13:0,39,1447	0/0:20,0:20:60.19:0,60,2114	1/1:10,4:14:35.62:636,36,0	0/0:33,0:33:90.19:0,90,3020	0/0:17,0:17:48.13:0,48,1643	0/0:13,0:13:39.13:0,39,1344
chr10	90005195	.	ACAAG	A	3111.92	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=1.664;DP=505;FS=0.448;HRun=0;HaplotypeScore=95.5664;InbreedingCoeff=0.9833;MQ=66.59;MQ0=2;MQRankSum=-8.659;QD=39.39;ReadPosRankSum=-6.370;VQSLOD=1.7366;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:69.28:0,69,1981	0/0:9,0:9:27.05:0,27,430	0/0:21,0:16:8.92:0,9,361	0/0:14,1:10:17.41:0,17,138	0/0:24,0:24:72.25:0,72,1582	0/0:9,0:9:27.09:0,27,588	0/0:15,0:15:45.15:0,45,890	0/0:26,0:25:68.58:0,69,1163	0/0:17,0:17:48.02:0,48,995	1/1:12,1:14:36.07:475,36,0	1/1:18,2:20:57.07:834,57,0	0/0:16,0:16:48.16:0,48,982	0/0:11,0:11:33.11:0,33,729	0/0:14,0:14:42.12:0,42,889	0/0:21,0:21:61.23:0,61,871	1/1:10,0:9:27.09:392,27,0	0/0:32,0:32:89.61:0,90,1288	1/1:15,3:19:57.15:856,57,0	0/0:12,0:12:33.06:0,33,634	0/0:20,0:20:56.94:0,57,1127	0/0:13,0:13:39.11:0,39,806	0/0:19,0:19:44.13:0,44,1056	0/0:14,0:14:42.11:0,42,916	0/0:21,0:21:63.19:0,63,1341	1/1:13,3:16:48.13:731,48,0	0/0:30,0:30:90.30:0,90,1922	0/0:17,0:17:51.17:0,51,1065	0/0:14,0:14:42.05:0,42,826
chr10	90005199	.	G	GA	1508.68	PASS	AB=0.883;AC=10;AF=0.179;AN=56;BaseQRankSum=-0.691;DP=506;FS=1.055;HRun=10;HaplotypeScore=71.8946;InbreedingCoeff=0.4219;MQ=65.73;MQ0=2;MQRankSum=-0.451;QD=12.07;ReadPosRankSum=-2.533;VQSLOD=2.8867;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:60.22:0,60,612	0/1:3,5:8:6.60:142,0,7	0/0:20,0:14:14.95:0,15,163	0/0:15,0:10:10.24:0,10,73	0/0:23,1:24:33.92:0,34,485	0/0:9,0:9:20.95:0,21,169	0/0:14,1:15:0.96:0,1,214	0/0:28,0:27:29.01:0,29,438	0/0:15,0:15:35.94:0,36,295	0/0:14,0:14:0.44:0,0,8	0/1:21,0:21:7.23:37,0,7	0/0:19,0:19:47.91:0,48,393	0/0:12,0:12:20.94:0,21,172	0/0:13,0:13:29.95:0,30,246	1/1:6,14:20:51.13:543,51,0	0/1:11,0:10:16.86:17,0,17	1/1:4,29:33:79.19:853,79,0	1/1:21,0:21:8.20:60,8,0	0/1:10,1:11:8.04:8,0,146	0/0:18,0:19:52.98:0,53,423	0/0:12,0:12:29.96:0,30,246	0/0:19,0:19:35.90:0,36,295	0/0:13,0:14:38:0,38,301	0/0:20,0:21:49.91:0,50,397	0/0:17,0:17:1.12:0,1,12	0/0:30,0:30:65.87:0,66,542	0/0:17,0:17:29.93:0,30,246	0/0:13,1:14:0.92:0,1,214
chr10	90005354	.	AGAGAGGGAGAGAG	A	2230.33	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.772;DP=410;FS=1.850;HRun=0;HaplotypeScore=126.1769;InbreedingCoeff=0.9573;MQ=62.30;MQ0=9;MQRankSum=-3.969;QD=40.55;ReadPosRankSum=1.347;VQSLOD=3.5428;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.13:0,69,2648	0/0:6,0:6:18:0,18,514	0/0:31,0:8:20.08:0,20,455	0/0:42,0:19:30.61:0,31,621	0/0:13,0:13:39.12:0,39,1603	0/0:9,0:9:27.09:0,27,1042	0/0:16,0:16:45.15:0,45,2057	0/0:14,0:14:33.07:0,33,1470	0/0:12,0:12:24.54:0,25,867	1/1:0,15:16:32.51:720,33,0	1/1:1,6:7:12:304,12,0	0/0:18,0:18:48.15:0,48,1931	0/0:11,0:11:30.10:0,30,1160	0/0:10,0:10:26.89:0,27,1054	0/0:14,0:14:32.96:0,33,1115	1/1:0,8:8:13.29:431,13,0	0/0:18,0:18:48.12:0,48,1990	1/1:1,12:12:11.75:487,12,0	0/0:4,0:4:12.04:0,12,490	0/0:17,0:17:43.03:0,43,1548	0/0:19,0:19:48.08:0,48,1538	0/0:14,0:14:39.13:0,39,1553	0/0:12,0:12:24.54:0,25,857	0/0:22,0:22:57.18:0,57,2673	1/1:1,10:11:12.04:455,12,0	0/0:13,0:13:39.12:0,39,1319	0/0:7,0:7:21.07:0,21,860	0/0:9,0:9:18.04:0,18,716
chr10	90006157	.	A	AAAACAAACAAACAAACAAAC	13887.72	PASS	AB=0.697;AC=9;AF=0.161;AN=56;BaseQRankSum=-1.669;DP=627;FS=1.620;HRun=0;HaplotypeScore=288.8124;InbreedingCoeff=0.8597;MQ=55.93;MQ0=2;MQRankSum=-10.215;QD=103.64;ReadPosRankSum=-0.226;VQSLOD=4.3401;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,108,4805	0/0:5,0:5:15.05:0,15,807	0/0:20,0:13:13.84:0,14,537	0/0:13,0:11:24.05:0,24,667	0/0:28,0:28:63.18:0,63,2765	0/0:23,0:22:38.88:0,39,1833	0/0:18,0:18:26.12:0,26,1257	0/0:33,0:31:51.17:0,51,1690	0/0:19,0:19:39.03:0,39,1573	1/1:11,6:30:69.04:4548,69,0	1/1:12,10:38:50.78:3290,51,0	0/0:18,0:18:36.10:0,36,1543	0/0:15,0:15:36.12:0,36,1643	0/0:20,0:20:54.17:0,54,2656	0/0:20,0:20:51.13:0,51,2456	1/1:5,9:19:24.08:2101,24,0	0/0:39,0:38:99:0,99,3936	0/1:13,2:23:16.23:1470,0,16	0/0:11,0:11:21.07:0,21,1053	0/0:25,0:25:60.15:0,60,2619	0/0:18,0:18:39.11:0,39,1702	0/0:19,0:19:48.11:0,48,1795	0/0:11,0:10:24.07:0,24,1094	0/0:19,0:19:48.13:0,48,1768	1/1:12,4:22:33.11:2478,33,0	0/0:30,0:30:63.15:0,63,2759	0/0:31,0:30:60.19:0,60,2768	0/0:14,0:14:42.14:0,42,2208
chr10	90007755	.	T	TG	6051.75	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.269;DP=704;FS=2.868;HRun=2;HaplotypeScore=90.5104;InbreedingCoeff=0.9995;MQ=82.87;MQ0=0;MQRankSum=-2.751;QD=36.02;ReadPosRankSum=1.744;VQSLOD=5.3789;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,154,1870	0/0:9,0:9:27.08:0,27,324	0/0:28,0:28:72.22:0,72,873	0/0:26,0:26:57.52:0,58,700	0/0:17,0:17:45.14:0,45,557	0/0:20,0:20:60.16:0,60,717	0/0:24,0:24:69.22:0,69,855	0/0:27,0:27:72.21:0,72,873	0/0:25,0:25:72.21:0,72,878	0/0:23,0:23:33.45:0,33,235	0/0:14,0:14:37.33:0,37,201	0/0:18,0:18:54.16:0,54,659	0/0:25,0:25:75.22:0,75,916	0/0:28,0:28:81.24:0,81,989	0/0:25,0:25:75.23:0,75,919	0/0:22,0:22:58.89:0,59,302	0/0:34,0:34:99:0,102,1264	0/0:30,0:30:63.63:0,64,351	1/1:3,19:22:54.10:673,54,0	1/1:0,11:11:33.11:463,33,0	1/1:4,66:70:99:2381,172,0	0/0:20,0:20:57.18:0,57,706	0/0:23,0:23:66.14:0,66,799	0/0:34,0:34:96.30:0,96,1189	0/0:12,0:12:30.71:0,31,146	1/1:2,31:33:85:1240,85,0	1/1:1,21:22:63.21:872,63,0	1/1:0,10:10:30.10:422,30,0
chr10	90008603	.	TAC	T	1478.25	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=6.420;DP=751;FS=2.405;HRun=0;HaplotypeScore=101.9254;InbreedingCoeff=0.7236;MQ=57.01;MQ0=10;MQRankSum=1.390;QD=19.20;ReadPosRankSum=2.615;VQSLOD=3.6635;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,118,1752	1/1:4,6:11:14.88:161,15,0	0/0:49,0:20:32.46:0,32,462	0/0:46,0:26:39.13:0,39,584	0/0:16,0:14:33.08:0,33,481	0/0:20,0:20:50.95:0,51,790	0/0:35,0:35:62.63:0,63,876	0/0:36,0:36:32.59:0,33,968	0/0:30,2:32:16.97:0,17,1263	0/0:23,0:23:45.15:0,45,698	0/0:15,0:15:36.12:0,36,576	0/0:23,1:24:17.53:0,18,783	0/0:18,1:19:20.54:0,21,811	0/0:19,2:21:2.39:0,2,487	1/1:4,27:31:72.21:867,72,0	0/0:25,1:26:75.24:0,75,1188	1/1:8,20:27:34.01:578,34,0	0/0:31,0:31:87.22:0,87,1339	0/0:21,0:17:24.08:0,24,390	0/0:14,1:15:2.48:0,2,535	0/0:54,2:56:47.08:0,47,1747	0/0:18,0:18:30.09:0,30,458	0/0:14,0:14:12.30:0,12,476	0/0:42,0:42:99:0,99,1510	0/0:18,0:18:39.13:0,39,631	0/0:28,0:28:57.19:0,57,921	0/0:20,0:20:48.16:0,48,775	0/1:6,0:6:18.60:19,0,199
chr10	90009898	.	T	TA	1997.43	PASS	AB=0.824;AC=16;AF=0.286;AN=56;BaseQRankSum=-7.084;DP=397;FS=21.758;HRun=11;HaplotypeScore=44.2995;InbreedingCoeff=0.7480;MQ=64.87;MQ0=5;MQRankSum=0.370;QD=14.37;ReadPosRankSum=2.031;VQSLOD=2.0513;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:40:84.87:0,85,608	1/1:1,6:7:11.79:122,12,0	0/1:22,0:15:17.39:17,0,75	0/0:13,0:8:11.75:0,12,73	0/0:21,1:22:14.37:0,14,294	0/0:6,0:6:14.94:0,15,116	0/0:8,0:8:14.94:0,15,116	0/0:18,1:17:38.83:0,39,300	0/0:11,0:10:20.85:0,21,158	1/1:1,13:14:32.87:310,33,0	0/1:5,6:11:8.21:106,0,8	0/0:11,0:11:20.89:0,21,162	0/0:10,0:10:29.89:0,30,232	0/0:8,0:8:14.93:0,15,116	1/1:4,9:13:3.82:220,4,0	1/1:1,7:8:15.03:152,15,0	1/1:3,16:19:45.09:457,45,0	1/1:2,16:18:41.92:410,42,0	0/0:13,0:13:23.89:0,24,186	0/0:7,0:6:11.93:0,12,93	0/0:9,0:8:20.89:0,21,159	0/0:1,0:1:2.99:0,3,23	0/0:6,0:7:11.14:0,11,89	0/0:14,0:14:35.86:0,36,278	1/1:7,18:24:39.08:396,39,0	0/0:19,0:19:41.83:0,42,325	0/0:26,0:26:65.68:0,66,503	0/0:13,0:13:32.82:0,33,255
chr10	90010991	.	A	ATTTTC	6019.55	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-4.640;DP=598;FS=0.436;HRun=0;HaplotypeScore=120.2556;InbreedingCoeff=0.8935;MQ=71.37;MQ0=10;MQRankSum=-6.114;QD=32.54;ReadPosRankSum=1.125;VQSLOD=4.7111;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:75.03:0,75,1371	1/1:4,8:12:12.04:277,12,0	0/0:23,0:14:4.86:0,5,98	0/0:15,0:9:4.44:0,4,66	0/0:34,0:35:70.09:0,70,1154	0/0:11,0:11:30.09:0,30,552	0/0:18,0:18:42.12:0,42,709	0/0:33,0:32:57.07:0,57,838	0/1:15,0:15:0.26:0,0,503	1/1:9,21:31:66.17:1268,66,0	1/1:4,11:16:21.56:327,22,0	0/0:13,0:13:30.07:0,30,443	0/0:10,0:9:24.07:0,24,397	0/0:13,0:13:24.05:0,24,336	1/1:9,18:28:45.61:1069,46,0	1/1:4,10:14:21.06:544,21,0	1/1:10,11:21:36.11:859,36,0	1/1:3,13:17:24.08:623,24,0	0/0:26,0:25:54.09:0,54,776	0/0:19,0:19:38.95:0,39,503	0/0:24,0:24:40.55:0,41,568	0/0:24,0:24:51.12:0,51,868	0/0:23,0:23:60.17:0,60,982	0/0:21,0:20:53.43:0,53,805	1/1:10,20:30:41.97:1053,42,0	0/0:32,0:32:7.73:0,8,991	0/0:23,0:23:54.15:0,54,901	0/0:12,0:12:21.05:0,21,341
chr10	90010997	.	T	TTTTC	3528.54	PASS	AB=0.970;AC=9;AF=0.161;AN=56;BaseQRankSum=6.483;DP=610;FS=2.628;HRun=0;HaplotypeScore=111.2009;InbreedingCoeff=0.1142;MQ=63.22;MQ0=13;MQRankSum=-3.398;QD=20.51;ReadPosRankSum=4.143;VQSLOD=3.6122;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:77.11:0,77,1365	0/1:11,0:11:38.10:123,0,38	0/0:18,0:9:20.67:0,21,156	0/0:11,0:5:8.46:0,8,81	0/0:37,0:37:69.65:0,70,1229	0/0:15,0:15:39.09:0,39,597	0/0:21,0:21:53.29:0,53,785	0/0:28,0:27:40.60:0,41,861	0/0:17,0:17:26.39:0,26,598	0/1:32,2:34:99:666,0,123	0/1:14,0:14:27.29:182,0,27	0/0:11,0:11:30.07:0,30,442	0/0:9,0:8:24.07:0,24,393	0/0:12,0:12:18.92:0,19,314	0/1:26,0:26:44.12:648,0,44	0/1:16,0:15:5.06:346,0,5	0/1:18,3:20:58.19:493,0,58	1/1:15,0:15:21.54:383,22,0	0/0:24,0:23:63.04:0,63,869	0/0:28,0:28:56.76:0,57,597	0/0:24,0:24:42.91:0,43,620	0/0:22,0:22:56.95:0,57,879	0/0:23,0:23:66.14:0,66,1043	0/0:22,0:21:58.75:0,59,851	0/1:34,1:35:91.93:689,0,92	0/0:36,0:35:48.69:0,49,1155	0/0:24,0:24:56.92:0,57,948	0/0:17,0:14:38.99:0,39,480
chr10	90011837	.	G	GGGA	2818.11	PASS	AB=0.548;AC=7;AF=0.125;AN=56;BaseQRankSum=-7.942;DP=863;FS=5.403;HRun=0;HaplotypeScore=107.9544;InbreedingCoeff=0.4861;MQ=51.94;MQ0=101;MQRankSum=3.302;QD=25.16;ReadPosRankSum=1.915;VQSLOD=3.4208;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:49:99:0,123,1905	0/0:8,0:8:24.08:0,24,392	0/0:60,0:2:6.02:0,6,98	0/0:44,0:3:9.03:0,9,147	0/0:21,0:20:48.12:0,48,758	0/0:29,0:27:57.19:0,57,931	0/0:44,0:41:99:0,108,1761	0/0:22,0:9:21.06:0,21,317	0/0:33,0:33:81.73:0,82,1270	0/1:5,16:21:43.86:952,0,44	1/1:2,6:7:2.58:67,3,0	0/0:27,0:27:78.27:0,78,1259	0/0:29,0:28:81.21:0,81,1221	0/0:30,0:29:78.23:0,78,1217	0/0:38,0:37:99:0,99,1595	0/1:4,28:32:9.88:765,0,10	0/0:47,0:46:99:0,117,1877	0/1:5,22:27:2:958,0,2	0/0:19,0:14:36.11:0,36,551	0/0:28,0:23:42.09:0,42,591	0/0:75,0:65:99:0,154,2487	0/0:23,0:22:54.16:0,54,834	0/0:14,0:12:30.10:0,30,490	0/0:33,0:33:81.01:0,81,1270	1/1:3,17:13:10.28:204,10,0	0/0:31,0:24:69.21:0,69,1058	0/0:33,0:33:93.30:0,93,1490	0/0:11,0:10:27.09:0,27,441
chr10	90013187	.	GA	G	922.18	PASS	AB=0.827;AC=13;AF=0.232;AN=56;BaseQRankSum=2.750;DP=546;FS=9.679;HRun=14;HaplotypeScore=67.3038;InbreedingCoeff=0.3271;MQ=64.04;MQ0=13;MQRankSum=0.907;QD=5.01;ReadPosRankSum=2.858;VQSLOD=1.5223;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,1:38:54.53:0,55,589	0/0:1,0:9:16.80:0,17,82	0/1:14,0:7:11.21:11,0,57	0/0:11,0:5:3.13:0,3,13	0/0:30,1:32:46.70:0,47,504	0/0:16,0:16:41.23:0,41,334	0/1:13,1:16:0.65:1,0,155	0/0:31,1:31:38.71:0,39,452	0/0:14,1:15:15.55:0,16,285	1/1:5,22:28:37.31:313,37,0	0/1:7,11:19:12.49:152,0,12	0/0:14,0:15:22.68:0,23,220	0/0:14,1:14:3.03:0,3,133	0/0:13,0:13:22.58:0,23,199	0/0:5,0:12:19.73:0,20,102	0/1:6,6:12:9.93:85,0,10	0/0:3,0:24:22.68:0,23,113	1/1:5,18:26:27.62:247,28,0	0/0:29,0:28:47.23:0,47,421	0/0:12,0:15:19.84:0,20,179	0/1:10,2:12:13.25:13,0,167	0/1:15,2:17:24.37:24,0,176	0/0:16,1:19:10.75:0,11,241	0/0:19,2:22:9.55:0,10,344	1/1:2,16:19:36.21:237,36,0	0/1:16,3:20:0.05:0,0,263	0/0:22,2:24:11.51:0,12,374	0/0:13,0:12:29.29:0,29,222
chr10	90017247	.	CTTTA	C	1171.25	PASS	AC=26;AF=0.722;AN=36;BaseQRankSum=2.121;DP=251;FS=1.394;HRun=0;HaplotypeScore=42.9691;InbreedingCoeff=0.5286;MQ=71.87;MQ0=4;MQRankSum=-0.159;QD=9.84;ReadPosRankSum=-0.552;VQSLOD=1.9153;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:15.05:0,15,336	1/1:3,0:4:3:28,3,0	./.	./.	1/1:15,6:21:12.04:185,12,0	1/1:2,5:7:9.03:139,9,0	1/1:1,1:2:3.01:46,3,0	./.	1/1:4,4:8:6.02:92,6,0	0/0:7,0:7:5.19:0,5,19	0/0:4,0:4:3.01:0,3,41	1/1:1,1:2:3.01:46,3,0	./.	./.	1/1:4,0:9:9.01:84,9,0	0/0:6,0:5:6.02:0,6,100	1/1:12,0:16:3:28,3,0	./.	0/0:13,0:12:12.04:0,12,253	1/1:10,1:11:3.01:46,3,0	./.	1/1:3,1:4:3.01:46,3,0	./.	./.	./.	1/1:5,3:8:9.01:98,9,0	1/1:6,2:8:3.01:46,3,0	1/1:9,9:18:27.09:416,27,0
chr10	90017277	.	T	TTATTTA	327.27	PASS	AC=8;AF=0.190;AN=42;BaseQRankSum=-1.591;DP=180;FS=12.251;HRun=0;HaplotypeScore=36.4625;InbreedingCoeff=0.5472;MQ=49.74;MQ0=9;MQRankSum=-0.200;QD=10.23;ReadPosRankSum=-0.711;VQSLOD=-0.0814;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:21.03:0,21,348	0/0:2,0:2:6.02:0,6,86	./.	0/0:1,0:1:0:0,0,0	0/0:7,0:7:12.04:0,12,191	0/0:6,0:6:9.03:0,9,143	0/0:1,0:1:3.01:0,3,48	0/0:40,0:32:61.41:0,61,833	0/0:5,0:5:9.03:0,9,138	1/1:3,0:3:9.02:119,9,0	1/1:1,4:5:3.01:73,3,0	0/0:4,0:4:3.01:0,3,48	./.	./.	0/0:6,0:6:9.03:0,9,130	1/1:0,3:2:6.02:207,6,0	0/0:9,0:8:9.03:0,9,116	1/1:4,13:14:3.01:45,3,0	0/0:9,0:7:21.07:0,21,375	0/0:3,0:1:3.01:0,3,48	./.	0/0:5,0:5:6.01:0,6,73	./.	./.	./.	0/0:5,0:5:12.04:0,12,176	0/0:3,0:3:5.98:0,6,68	0/0:15,0:15:42.08:0,42,588
chr10	90018180	.	C	CCTTAAGGCACACATAAACATGAT	39307.68	PASS	AB=0.727;AC=55;AF=0.982;AN=56;BaseQRankSum=0.232;DP=290;FS=10.473;HRun=0;HaplotypeScore=321.4235;InbreedingCoeff=-0.0242;MQ=70.36;MQ0=0;MQRankSum=-1.531;QD=135.54;ReadPosRankSum=1.113;VQSLOD=3.4852;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:48.16:3742,48,0	1/1:9,0:9:21.07:1221,21,0	1/1:3,1:10:26.76:1467,27,0	0/1:5,0:8:2.60:847,0,3	1/1:9,0:9:18.06:1369,18,0	1/1:7,0:7:15.05:1005,15,0	1/1:11,0:11:22.58:1022,23,0	1/1:13,0:13:36.11:2349,36,0	1/1:13,0:13:28.34:1740,28,0	1/1:13,0:13:32.85:2128,33,0	1/1:3,0:3:6.02:167,6,0	1/1:13,0:13:34.29:1474,34,0	1/1:8,0:8:21.07:1291,21,0	1/1:9,0:9:24.08:1867,24,0	1/1:18,0:18:53.20:2991,53,0	1/1:13,0:13:28.34:1217,28,0	1/1:14,0:14:24.08:1947,24,0	1/1:6,0:6:12.04:791,12,0	1/1:11,0:9:21.05:1003,21,0	1/1:10,0:10:21.07:1339,21,0	1/1:13,0:13:24.04:1270,24,0	1/1:2,0:2:6.02:575,6,0	1/1:8,0:8:24.05:1187,24,0	1/1:14,0:14:24.51:1059,25,0	1/1:5,0:5:13.29:716,13,0	1/1:7,0:7:21.07:1569,21,0	1/1:12,0:12:27.09:1701,27,0	1/1:11,0:11:12.04:251,12,0
chr10	90020545	.	TAAAATA	T	2248.60	PASS	AB=0.656;AC=6;AF=0.107;AN=56;BaseQRankSum=9.016;DP=420;FS=3.104;HRun=0;HaplotypeScore=91.3391;InbreedingCoeff=0.5669;MQ=64.36;MQ0=7;MQRankSum=-9.757;QD=34.59;ReadPosRankSum=1.258;VQSLOD=3.5569;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:9,17:26:79.60:881,0,80	1/1:1,14:15:36.12:796,36,0	0/0:14,0:8:24.08:0,24,559	0/0:8,0:3:6.02:0,6,206	0/0:25,0:25:66.21:0,66,2147	0/0:12,0:12:27.09:0,27,889	0/0:7,0:7:18.06:0,18,605	0/0:25,0:23:66.21:0,66,1962	0/0:8,0:8:21.07:0,21,711	0/0:16,0:16:48.16:0,48,1598	0/0:26,0:26:69.24:0,69,2301	0/0:12,0:12:21.07:0,21,721	0/0:11,0:11:33.11:0,33,1093	0/0:12,0:12:30.10:0,30,928	1/1:1,6:7:18.06:398,18,0	0/0:9,0:9:21.07:0,21,646	0/1:10,7:17:98.02:309,0,98	0/0:23,0:23:54.19:0,54,1788	0/0:23,0:22:51.18:0,51,1737	0/0:23,0:23:63.22:0,63,2088	0/0:6,0:6:15.05:0,15,515	0/0:5,0:5:12.04:0,12,370	0/0:10,0:10:24.08:0,24,812	0/0:4,0:4:9.03:0,9,309	0/0:24,0:24:66.23:0,66,2254	0/0:25,0:25:72.25:0,72,2472	0/0:10,0:10:30.10:0,30,1030	0/0:16,0:16:48.16:0,48,1648
chr10	90020623	.	CTTTT	C	4408.85	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=1.845;DP=487;FS=1.266;HRun=18;HaplotypeScore=89.0310;InbreedingCoeff=0.8339;MQ=73.69;MQ0=4;MQRankSum=-1.279;QD=13.44;ReadPosRankSum=6.247;VQSLOD=1.0694;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,12:29:39.38:458,39,0	1/1:4,3:7:8.83:109,9,0	0/0:39,0:23:38.03:0,38,708	0/0:25,0:14:8.07:0,8,215	1/1:6,5:11:2.07:36,2,0	1/1:3,12:16:10.47:312,10,0	1/1:6,5:12:12.83:149,13,0	1/1:17,12:26:24.37:292,24,0	1/1:3,4:10:14.35:139,14,0	0/0:12,0:15:33.07:0,33,425	0/0:17,0:23:37.91:0,38,500	1/1:7,14:21:19.49:232,19,0	1/1:7,4:11:14.70:162,15,0	1/1:3,7:12:18.90:184,19,0	1/1:5,7:12:19.33:253,19,0	0/0:8,0:16:10.03:0,10,384	1/1:6,25:33:36.78:427,37,0	0/0:16,0:20:48.11:0,48,703	1/1:13,7:20:7.73:259,8,0	1/1:5,7:12:11.61:126,12,0	1/1:4,5:10:2.72:68,3,0	1/1:4,7:11:14.54:182,15,0	1/1:7,5:13:9.91:113,10,0	1/1:3,10:14:20.64:254,21,0	0/0:12,0:19:34.35:0,34,533	1/1:9,8:21:8.71:288,9,0	1/1:6,11:17:17.35:218,17,0	1/1:3,4:7:11.87:146,12,0
chr10	90020935	.	A	AGTGCCCTGGGGAGAGGCT	16918.09	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=4.996;DP=712;FS=0.469;HRun=0;HaplotypeScore=329.5229;InbreedingCoeff=0.9129;MQ=84.24;MQ0=0;MQRankSum=-8.557;QD=39.90;ReadPosRankSum=-4.493;VQSLOD=2.7585;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:33.07:0,33,1355	0/0:8,0:8:9.03:0,9,237	0/0:30,0:30:3.70:0,4,137	0/0:22,0:22:15.05:0,15,249	1/1:16,3:21:2.91:54,3,0	1/1:26,0:26:24.08:1198,24,0	1/1:29,0:29:33.11:1399,33,0	1/1:32,0:32:25.33:591,25,0	1/1:22,4:28:21.07:1696,21,0	0/0:16,0:16:12.04:0,12,579	0/0:27,0:27:15.05:0,15,585	1/1:20,6:28:27.09:2003,27,0	1/1:19,1:20:21.07:1366,21,0	1/1:25,1:28:30.10:2001,30,0	0/0:28,0:27:48.14:0,48,2011	0/0:28,0:28:60.21:0,60,2589	0/0:44,0:44:84.29:0,84,3802	0/0:21,0:21:51.18:0,51,2080	1/1:26,0:26:24.08:998,24,0	1/1:21,0:21:15.05:692,15,0	1/1:34,0:34:17.98:336,18,0	1/1:24,0:24:16.25:321,16,0	1/1:20,0:20:13.15:207,13,0	1/1:27,0:27:31.31:1334,31,0	0/0:19,0:19:15.05:0,15,534	1/1:27,0:27:27.07:1334,27,0	1/1:18,0:18:12.04:720,12,0	1/1:15,0:15:12.04:667,12,0
chr10	90022060	.	C	CA	1494.17	PASS	AB=0.600;AC=29;AF=0.604;AN=48;BaseQRankSum=2.354;DP=76;FS=7.318;HRun=3;HaplotypeScore=73.0731;InbreedingCoeff=0.5717;MQ=40.91;MQ0=0;MQRankSum=-0.006;QD=35.58;ReadPosRankSum=0.696;VQSLOD=4.1298;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:18.06:0,18,251	0/0:3,0:3:9.03:0,9,117	0/0:2,0:2:6.02:0,6,74	0/0:3,0:2:6.02:0,6,74	1/1:0,9:9:24.01:320,24,0	1/1:0,1:1:3.01:44,3,0	1/1:0,1:1:3.01:43,3,0	1/1:0,4:3:9.03:133,9,0	1/1:0,1:1:3.01:44,3,0	0/0:5,0:5:15.05:0,15,209	0/0:7,0:7:18.05:0,18,236	1/1:0,2:2:6.02:81,6,0	1/1:0,1:1:3.01:43,3,0	./.	0/0:1,0:1:3.01:0,3,42	./.	./.	0/0:1,0:1:3.01:0,3,37	1/1:0,4:4:12.04:178,12,0	1/1:0,2:2:6.02:87,6,0	1/1:0,2:2:6.02:87,6,0	1/1:0,4:4:12.04:173,12,0	1/1:0,3:3:9.03:130,9,0	./.	0/0:3,0:3:9.03:0,9,125	0/1:1,2:3:32.46:81,0,32	1/1:0,4:4:12.04:175,12,0	1/1:0,1:1:3.01:44,3,0
chr10	90022132	.	CT	C	866.71	PASS	AB=0.723;AC=30;AF=0.789;AN=38;BaseQRankSum=0.636;DP=179;FS=8.451;HRun=2;HaplotypeScore=31.0439;InbreedingCoeff=0.0109;MQ=31.92;MQ0=51;MQRankSum=-2.758;QD=7.81;ReadPosRankSum=2.286;VQSLOD=0.6013;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,2:2:3.01:34,3,0	./.	0/0:36,3:2:0:0,0,0	0/1:44,3:4:6.13:6,0,12	1/1:1,5:6:3.01:33,3,0	1/1:3,2:3:3.01:34,3,0	./.	./.	./.	1/1:4,3:3:9.03:110,9,0	./.	1/1:0,1:1:3.01:34,3,0	0/1:1,2:3:29.75:49,0,30	./.	./.	1/1:0,4:4:12.01:125,12,0	0/1:4,2:3:28.76:29,0,34	0/0:3,0:1:3.01:0,3,39	1/1:2,1:1:3.01:38,3,0	1/1:1,3:3:3.47:29,3,0	./.	0/1:1,2:2:0.50:29,0,1	1/1:1,2:2:6.02:68,6,0	1/1:2,3:3:2.87:35,3,0	1/1:2,3:4:9.03:103,9,0	1/1:0,3:3:9.03:108,9,0	1/1:0,3:3:9.03:106,9,0	./.
chr10	90022263	.	TTTAAAGTGG	T	15271.63	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=2.500;DP=305;FS=74.530;HRun=0;HaplotypeScore=136.4269;InbreedingCoeff=0.7991;MQ=76.12;MQ0=2;MQRankSum=-6.916;QD=57.20;ReadPosRankSum=5.766;VQSLOD=1.8445;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,8:12:18.02:458,18,0	1/1:1,7:8:21.07:615,21,0	0/0:21,0:11:17.02:0,17,347	0/0:15,0:14:32:0,32,1101	1/1:4,15:19:39.13:1142,39,0	1/1:2,9:11:30.10:879,30,0	1/1:4,3:7:9.03:264,9,0	1/1:6,10:16:30.09:815,30,0	1/1:2,3:5:9.03:264,9,0	1/1:2,6:8:15.04:377,15,0	1/1:6,10:16:18.06:527,18,0	1/1:2,10:12:27.09:791,27,0	1/1:1,3:4:9.03:264,9,0	1/1:4,3:7:8.99:196,9,0	1/1:2,10:12:30.10:879,30,0	1/1:3,11:14:33.10:905,33,0	1/1:5,6:11:9.03:264,9,0	1/1:2,5:7:12.04:350,12,0	1/1:5,10:15:33.11:967,33,0	1/1:1,15:16:42.14:1230,42,0	1/1:1,8:9:8.99:196,9,0	1/1:1,6:7:18.06:527,18,0	1/1:3,8:11:18.06:527,18,0	./.	1/1:2,9:11:27.09:790,27,0	1/1:3,11:14:36.11:994,36,0	1/1:2,5:6:18.06:526,18,0	1/1:3,5:8:18.06:527,18,0
chr10	90022271	.	GGTTAAAGT	G	9032.50	PASS	AB=0.990;AC=47;AF=0.839;AN=56;BaseQRankSum=8.108;DP=283;FS=86.359;HRun=0;HaplotypeScore=142.5344;InbreedingCoeff=0.2699;MQ=83.76;MQ0=1;MQRankSum=-8.589;QD=36.72;ReadPosRankSum=9.091;VQSLOD=0.6618;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:18.02:278,18,0	1/1:7,1:8:21.07:367,21,0	0/0:19,0:12:35.82:0,36,917	0/0:17,0:17:47.37:0,47,1489	1/1:19,0:19:39.13:677,39,0	1/1:10,1:11:30.10:521,30,0	1/1:4,0:4:9.03:156,9,0	1/1:13,0:13:17.77:455,18,0	1/1:4,0:4:9.03:156,9,0	0/1:7,0:7:29.09:190,0,29	0/1:15,0:15:80.69:285,0,81	1/1:10,0:10:27.09:468,27,0	0/1:4,0:4:23.90:144,0,24	1/1:3,0:3:8.99:124,9,0	1/1:12,0:12:30.10:525,30,0	1/1:13,0:13:33.10:546,33,0	1/1:8,0:8:9.03:156,9,0	1/1:6,0:6:12.04:206,12,0	1/1:13,0:13:33.11:572,33,0	0/1:19,1:20:23.71:681,0,24	0/1:9,0:9:56.50:109,0,56	1/1:7,0:7:9.66:301,10,0	1/1:10,0:10:18.06:312,18,0	1/1:2,0:2:2.96:19,3,0	1/1:10,0:10:27.09:470,27,0	1/1:14,0:14:36.11:598,36,0	1/1:6,0:5:18.06:311,18,0	1/1:8,1:9:24.08:407,24,0
chr10	90022499	.	C	CTT	3992.94	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.496;DP=617;FS=2.204;HRun=0;HaplotypeScore=89.5981;InbreedingCoeff=0.9997;MQ=84.19;MQ0=0;MQRankSum=-1.512;QD=53.24;ReadPosRankSum=2.163;VQSLOD=4.4815;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,163,2585	1/1:0,12:12:33.11:646,33,0	0/0:20,0:20:57.17:0,57,887	0/0:22,0:22:51.16:0,51,797	0/0:20,0:20:54.18:0,54,877	0/0:24,0:24:72.25:0,72,1174	0/0:22,0:22:66.21:0,66,1052	0/0:24,0:24:72.25:0,72,1174	0/0:16,0:16:45.12:0,45,693	0/0:18,0:18:54.18:0,54,866	0/0:13,0:13:33.11:0,33,535	0/0:22,0:22:63.22:0,63,1025	0/0:17,0:17:51.17:0,51,822	0/0:19,0:19:57.19:0,57,927	1/1:4,30:35:96.29:1884,96,0	0/0:16,0:16:42.14:0,42,676	1/1:0,27:28:72.25:1463,72,0	0/0:25,0:25:75.24:0,75,1195	0/0:20,0:20:60.20:0,60,979	0/0:20,0:20:54.18:0,54,881	0/0:37,0:37:99:0,108,1760	0/0:17,0:17:48.16:0,48,781	0/0:18,0:18:45.15:0,45,726	0/0:24,0:24:72.23:0,72,1150	0/0:15,0:15:42.14:0,42,685	0/0:25,0:25:75.26:0,75,1213	0/0:20,0:19:60.14:0,60,911	0/0:12,0:12:33.11:0,33,538
chr10	90022943	.	G	GGTTTTGTTTT	41188.81	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.252;DP=587;FS=5.085;HRun=0;HaplotypeScore=150.7115;InbreedingCoeff=0.9441;MQ=51.36;MQ0=0;MQRankSum=-5.749;QD=74.62;ReadPosRankSum=4.534;VQSLOD=4.3397;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,8:28:31.33:1175,31,0	1/1:4,4:8:18.06:843,18,0	0/0:17,0:16:45.55:0,46,904	0/0:17,0:16:32.86:0,33,732	1/1:12,13:27:51.11:2318,51,0	1/1:12,19:32:60.67:3002,61,0	1/1:13,4:18:30.10:1364,30,0	1/1:28,5:31:36.07:1387,36,0	1/1:13,12:26:45.15:2250,45,0	1/1:13,8:21:33.09:1297,33,0	1/1:8,8:17:36.12:1810,36,0	1/1:14,7:21:33.11:1446,33,0	1/1:6,12:19:36.12:1820,36,0	1/1:9,10:20:33.11:1633,33,0	1/1:11,11:22:42.14:1937,42,0	1/1:11,15:27:57.19:2783,57,0	1/1:13,9:23:32.94:1345,33,0	1/1:12,7:19:21.07:979,21,0	1/1:4,7:12:27.05:956,27,0	1/1:16,10:29:48.12:1811,48,0	1/1:8,1:11:6.91:305,7,0	1/1:8,6:18:33.02:1182,33,0	1/1:9,11:20:39.13:1707,39,0	1/1:6,11:18:27.09:1295,27,0	1/1:8,12:21:39.13:1907,39,0	1/1:13,15:28:45.08:2042,45,0	1/1:7,11:20:36.12:1783,36,0	1/1:5,4:10:18.06:811,18,0
chr10	90023189	.	GTTTGTTTGTT	G	24460.66	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=5.873;DP=582;FS=10.760;HRun=0;HaplotypeScore=161.9279;InbreedingCoeff=0.7899;MQ=46.41;MQ0=36;MQRankSum=-5.711;QD=47.13;ReadPosRankSum=6.059;VQSLOD=3.4995;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,40:40:72.25:2041,72,0	1/1:6,0:6:4.89:51,5,0	0/0:22,0:12:33.11:0,33,1009	0/0:15,0:13:39.13:0,39,1156	1/1:8,20:23:54.18:1533,54,0	1/1:2,22:22:39.13:1322,39,0	1/1:2,22:23:30.10:997,30,0	1/1:6,20:16:39.13:786,39,0	1/1:0,22:21:36.12:1220,36,0	1/1:2,23:24:60:1458,60,0	1/1:3,19:21:39.09:1006,39,0	1/1:3,28:31:36.12:1209,36,0	1/1:0,12:12:20.80:710,21,0	1/1:1,10:11:27.09:912,27,0	0/1:30,0:27:8.27:8,0,36	1/1:1,16:15:18.06:574,18,0	0/0:25,0:22:9.05:0,9,171	1/1:2,14:14:24.08:814,24,0	1/1:0,10:10:30.10:850,30,0	1/1:1,23:24:57.19:1535,57,0	1/1:16,0:14:11.33:238,11,0	1/1:1,11:12:27.09:681,27,0	1/1:5,10:12:18.06:429,18,0	1/1:3,25:28:30.06:837,30,0	1/1:0,19:19:36.12:1200,36,0	1/1:3,18:20:51.17:1325,51,0	1/1:2,21:21:51.18:1728,51,0	1/1:0,14:14:30.10:999,30,0
chr10	90023193	.	GTTTGTT	G	16113.52	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=6.737;DP=553;FS=2.969;HRun=0;HaplotypeScore=153.0311;InbreedingCoeff=0.9605;MQ=46.78;MQ0=38;MQRankSum=-5.455;QD=31.11;ReadPosRankSum=3.709;VQSLOD=4.9035;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:43,0:40:69.71:1175,70,0	1/1:0,5:5:15.05:341,15,0	0/0:19,0:10:30.10:0,30,638	0/0:16,0:13:36.12:0,36,741	1/1:25,0:20:51.64:861,52,0	1/1:24,0:22:39.13:689,39,0	1/1:23,0:22:30.10:523,30,0	1/1:25,0:15:39.12:592,39,0	1/1:22,0:21:36.12:636,36,0	1/1:24,0:23:58.53:927,59,0	1/1:20,0:19:36.12:597,36,0	1/1:28,0:28:36.12:626,36,0	1/1:12,0:12:20.48:370,20,0	1/1:10,0:10:27.09:485,27,0	1/1:4,26:27:60.21:1441,60,0	1/1:17,0:15:18.06:311,18,0	1/1:4,18:19:21.07:515,21,0	1/1:16,0:14:24.08:425,24,0	1/1:10,0:10:30.10:510,30,0	1/1:23,0:23:54.24:876,54,0	1/1:14,0:11:12.04:207,12,0	1/1:11,0:11:27.09:438,27,0	1/1:13,0:10:18.06:284,18,0	1/1:25,0:25:26.83:428,27,0	1/1:20,0:19:36.12:629,36,0	1/1:19,0:18:49.41:803,49,0	1/1:23,0:21:51.17:902,51,0	1/1:14,0:14:30.10:524,30,0
chr10	90023197	.	GTT	G	8772.02	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=7.835;DP=553;FS=0.000;HRun=3;HaplotypeScore=152.5646;InbreedingCoeff=0.9470;MQ=51.17;MQ0=38;MQRankSum=-6.773;QD=17.00;ReadPosRankSum=4.642;VQSLOD=2.1083;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:42,1:40:69:700,69,0	1/1:5,0:5:15.01:148,15,0	0/0:20,0:11:33.11:0,33,522	0/0:17,0:16:40.40:0,40,657	1/1:22,3:20:50.99:497,51,0	1/1:22,2:22:38.96:327,39,0	1/1:22,1:22:29.98:271,30,0	1/1:21,4:15:37.33:485,37,0	1/1:22,0:21:35.96:301,36,0	1/1:24,0:23:56.87:647,57,0	1/1:19,1:19:36.01:373,36,0	1/1:28,0:28:35.84:291,36,0	1/1:12,0:12:20.78:175,21,0	1/1:10,0:10:26.98:241,27,0	1/1:27,2:26:57.47:499,57,0	1/1:16,1:15:17.99:171,18,0	1/1:19,2:18:21.01:193,21,0	1/1:16,0:14:23.97:201,24,0	1/1:10,0:10:30.01:316,30,0	1/1:23,0:23:51.02:537,51,0	1/1:1,12:10:9.03:137,9,0	1/1:11,0:11:27.02:299,27,0	1/1:12,1:10:18.02:200,18,0	1/1:26,0:26:23.99:221,24,0	1/1:20,0:19:35.97:322,36,0	1/1:18,1:18:48:520,48,0	1/1:21,2:21:50.94:427,51,0	1/1:14,0:14:29.98:272,30,0
chr10	90024263	.	AT	A	6048.58	PASS	AC=52;AF=1.000;AN=52;BaseQRankSum=2.913;DP=352;FS=6.567;HRun=1;HaplotypeScore=218.6624;InbreedingCoeff=0.0061;MQ=28.25;MQ0=35;MQRankSum=-2.136;QD=18.33;ReadPosRankSum=2.913;VQSLOD=4.7417;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:31.27:416,31,0	1/1:1,6:7:17.90:130,18,0	./.	./.	1/1:1,12:12:29.76:207,30,0	1/1:1,17:18:50.67:361,51,0	1/1:2,7:7:20.83:146,21,0	1/1:1,9:9:23.90:183,24,0	1/1:1,11:12:32.80:235,33,0	1/1:2,11:11:32.75:252,33,0	1/1:0,12:12:32.73:228,33,0	1/1:1,17:18:53.62:379,54,0	1/1:0,11:11:32.78:233,33,0	1/1:1,11:12:35.75:254,36,0	1/1:0,11:11:32.77:231,33,0	1/1:2,10:11:23.15:204,23,0	1/1:1,6:6:14.91:108,15,0	1/1:5,8:11:9.91:188,10,0	1/1:4,10:10:29.93:243,30,0	1/1:2,8:9:26.83:193,27,0	1/1:3,4:4:11.92:84,12,0	1/1:0,10:10:29.78:210,30,0	1/1:0,15:15:44.62:308,45,0	1/1:3,4:5:2.98:21,3,0	1/1:3,13:15:39.26:282,39,0	1/1:1,21:23:64.77:488,65,0	1/1:2,17:19:51.61:376,52,0	1/1:1,4:4:11.94:87,12,0
chr10	90024265	.	CCG	C	4020.40	PASS	AC=52;AF=1.000;AN=52;BaseQRankSum=1.695;DP=340;FS=5.142;HRun=0;HaplotypeScore=231.2127;InbreedingCoeff=0.0783;MQ=27.62;MQ0=35;MQRankSum=-0.403;QD=12.68;ReadPosRankSum=1.695;VQSLOD=3.0385;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:24:19.52:257,20,0	1/1:1,6:7:17.08:87,17,0	./.	./.	1/1:2,12:13:28.36:137,28,0	1/1:1,17:18:48.29:241,48,0	1/1:1,7:7:19.89:99,20,0	1/1:2,7:8:21.18:111,21,0	1/1:0,11:11:31.28:157,31,0	1/1:2,11:11:31.81:170,32,0	1/1:0,12:12:31.28:153,31,0	1/1:0,18:18:51.22:258,51,0	1/1:0,11:11:31.25:155,31,0	1/1:0,12:12:34.26:175,34,0	1/1:0,11:11:31.25:155,31,0	1/1:2,10:11:28.47:144,28,0	1/1:0,6:6:14.24:71,14,0	1/1:2,8:8:23.05:121,23,0	1/1:4,10:10:29.05:161,29,0	1/1:1,9:9:25.68:131,26,0	1/1:1,4:4:11.36:56,11,0	1/1:0,10:10:28.41:141,28,0	1/1:0,15:15:42.57:207,43,0	1/1:1,4:4:2.84:14,3,0	1/1:2,13:14:34.56:173,35,0	1/1:1,21:22:63.52:336,64,0	1/1:2,17:19:49.88:251,50,0	1/1:1,4:4:11.40:58,11,0
chr10	90024268	.	ATGCCCTCTT	A	21845.55	PASS	AB=0.532;AC=51;AF=0.981;AN=52;BaseQRankSum=1.525;DP=338;FS=5.088;HRun=0;HaplotypeScore=207.1417;InbreedingCoeff=-0.0302;MQ=27.72;MQ0=35;MQRankSum=1.171;QD=69.35;ReadPosRankSum=1.695;VQSLOD=4.6922;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:3,22:24:61.63:1614,0,62	1/1:1,6:7:18.06:469,18,0	./.	./.	1/1:1,14:14:30.10:767,30,0	1/1:1,17:18:51.18:1319,51,0	1/1:1,7:7:21.07:543,21,0	1/1:1,7:7:21.07:558,21,0	1/1:0,11:11:33.11:854,33,0	1/1:2,11:11:33.11:873,33,0	1/1:0,12:12:33.11:848,33,0	1/1:0,18:18:54.19:1398,54,0	1/1:0,11:11:33.11:850,33,0	1/1:0,12:12:36.12:927,36,0	1/1:0,11:11:33.11:853,33,0	1/1:2,10:11:31.66:785,32,0	1/1:0,6:6:15.05:388,15,0	1/1:2,8:8:24.08:632,24,0	1/1:4,10:10:30.10:797,30,0	1/1:1,9:9:27.09:700,27,0	1/1:1,4:4:12.04:309,12,0	1/1:0,10:10:30.10:774,30,0	1/1:0,15:15:45.15:1157,45,0	1/1:1,4:4:3.01:77,3,0	1/1:0,13:13:39.13:966,39,0	1/1:0,21:22:66.23:1743,66,0	1/1:2,17:19:51.18:1328,51,0	1/1:1,4:4:12.04:315,12,0
chr10	90024505	.	C	CAGAGAGAGAGAG	8935.82	PASS	AB=1.000;AC=43;AF=0.896;AN=48;BaseQRankSum=-5.333;DP=370;FS=7.216;HRun=0;HaplotypeScore=133.2061;InbreedingCoeff=0.5511;MQ=52.20;MQ0=6;MQRankSum=-3.335;QD=32.73;ReadPosRankSum=-1.168;VQSLOD=3.8444;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:25:20.13:0,20,199	1/1:3,1:4:6.02:267,6,0	./.	0/0:31,0:20:18.66:0,19,266	1/1:18,0:17:3.01:45,3,0	1/1:24,3:28:12.04:673,12,0	1/1:13,0:13:12.04:495,12,0	1/1:24,0:24:13.44:248,13,0	1/1:6,3:10:9.03:525,9,0	1/1:8,0:8:12.04:362,12,0	0/1:9,0:9:0:0,0,0	1/1:8,1:10:9.03:443,9,0	1/1:3,1:4:6.02:248,6,0	1/1:14,2:17:9.03:510,9,0	1/1:13,3:17:15.05:823,15,0	1/1:1,0:8:15.05:463,15,0	1/1:16,0:16:14.37:282,14,0	./.	1/1:10,0:10:9.03:434,9,0	1/1:13,0:13:2.68:174,3,0	./.	./.	1/1:8,0:8:6.02:259,6,0	1/1:12,0:12:9.03:309,9,0	1/1:6,0:8:9.03:286,9,0	1/1:14,2:15:27.08:1088,27,0	1/1:7,3:11:18.06:906,18,0	1/1:7,0:7:6.49:97,6,0
chr10	90024628	.	TC	T	2559.29	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=1.696;DP=311;FS=3.491;HRun=1;HaplotypeScore=61.7710;InbreedingCoeff=0.2655;MQ=49.52;MQ0=18;MQRankSum=1.812;QD=10.20;ReadPosRankSum=-0.851;VQSLOD=1.1876;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:14:17.45:110,17,0	1/1:3,0:3:3.85:21,4,0	0/0:13,0:2:2.97:0,3,20	0/0:30,0:10:13.57:0,14,84	1/1:20,1:20:38.98:276,39,0	1/1:8,1:9:15.28:122,15,0	1/1:5,0:5:11.97:102,12,0	1/1:16,1:16:21.07:181,21,0	1/1:7,0:6:8.97:74,9,0	0/1:14,0:13:30.72:31,0,135	0/1:15,0:14:57.98:58,0,119	1/1:2,0:2:5.97:48,6,0	1/1:5,0:4:7.17:44,7,0	1/1:5,1:6:11.77:88,12,0	1/1:10,0:10:23.11:105,23,0	0/0:6,0:6:17.95:0,18,155	0/1:14,0:12:19.89:105,0,20	0/1:17,0:13:53.32:53,0,170	1/1:15,0:10:25.17:190,25,0	1/1:17,0:17:31.80:319,32,0	0/1:6,0:5:5.99:59,0,6	1/1:2,0:2:4.25:31,4,0	1/1:8,0:8:8.92:66,9,0	1/1:7,1:8:17.82:135,18,0	0/0:11,0:9:0.21:0,0,143	1/1:15,1:16:1.90:207,2,0	1/1:13,1:12:33.56:262,34,0	1/1:5,0:3:4.25:30,4,0
chr10	90024743	.	A	AT	6224.50	PASS	AB=0.563;AC=39;AF=0.696;AN=56;BaseQRankSum=-5.367;DP=374;FS=5.569;HRun=9;HaplotypeScore=54.9424;InbreedingCoeff=0.8570;MQ=66.53;MQ0=5;MQRankSum=0.394;QD=23.14;ReadPosRankSum=1.540;VQSLOD=5.8418;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:56.94:0,57,485	1/1:0,9:9:14.40:141,14,0	0/0:14,0:11:13.30:0,13,69	0/0:10,0:8:6.04:0,6,118	1/1:4,16:20:24.11:471,24,0	1/1:1,9:10:27.07:299,27,0	1/1:3,11:14:4.02:273,4,0	1/1:6,14:19:48.13:529,48,0	1/1:0,6:6:15.04:166,15,0	0/0:7,0:6:14.99:0,15,130	0/0:9,0:9:20.98:0,21,178	1/1:2,10:12:21.06:232,21,0	1/1:2,10:12:27.07:290,27,0	0/1:2,7:9:8:144,0,8	1/1:7,7:15:29.91:300,30,0	0/0:7,0:7:21:0,21,182	1/1:4,27:30:69.19:763,69,0	0/0:22,0:22:50.97:0,51,442	1/1:3,11:13:33.09:364,33,0	1/1:6,14:20:41.96:409,42,0	1/1:2,5:7:15.89:155,16,0	1/1:1,4:5:14.25:139,14,0	1/1:1,13:14:27.07:294,27,0	1/1:1,15:16:39.11:430,39,0	0/0:10,0:10:23.99:0,24,207	1/1:4,10:14:36.10:394,36,0	1/1:4,11:13:32.93:334,33,0	1/1:0,6:6:9.02:100,9,0
chr10	90025185	.	A	AGAGCGCTTGCCTAGCAAGCGC	18589.39	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.717;DP=406;FS=16.126;HRun=0;HaplotypeScore=163.5048;InbreedingCoeff=0.5519;MQ=46.43;MQ0=17;MQRankSum=-3.257;QD=59.39;ReadPosRankSum=0.527;VQSLOD=3.6525;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,2:15:6.02:455,6,0	1/1:1,2:3:2.81:306,3,0	0/0:49,0:18:43.14:0,43,1415	0/0:44,0:11:30.04:0,30,944	1/1:20,0:21:15.47:520,15,0	1/1:11,1:12:30.02:1541,30,0	1/1:3,6:12:5.93:323,6,0	1/1:21,0:17:29.48:531,29,0	1/1:0,2:8:6.02:604,6,0	1/1:12,3:15:20.98:1197,21,0	1/1:13,1:15:16.42:443,16,0	1/1:5,1:6:3.01:306,3,0	1/1:6,0:6:15.05:791,15,0	1/1:6,0:6:12.04:597,12,0	1/1:12,0:11:15.05:825,15,0	1/1:11,2:13:24.05:1529,24,0	1/1:7,2:14:12.04:1120,12,0	1/1:2,3:14:8.79:595,9,0	1/1:14,2:13:36.08:1723,36,0	1/1:14,0:14:12:142,12,0	1/1:1,1:6:3.48:307,3,0	1/1:14,1:15:12.01:364,12,0	1/1:12,1:12:14.28:464,14,0	1/1:0,1:3:3.01:306,3,0	1/1:7,0:7:12:144,12,0	1/1:14,1:15:29.96:1182,30,0	1/1:14,3:17:27.07:2051,27,0	1/1:11,0:11:9:223,9,0
chr10	90025225	.	AAG	A	2128.20	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-3.611;DP=432;FS=3.425;HRun=0;HaplotypeScore=86.6345;InbreedingCoeff=-0.3075;MQ=46.36;MQ0=22;MQRankSum=1.676;QD=5.31;ReadPosRankSum=-7.257;VQSLOD=0.4119;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:20:8.22:101,0,8	1/1:8,2:10:11.10:126,11,0	0/0:31,0:9:11.95:0,12,76	0/1:29,0:10:3.73:4,0,60	0/1:25,0:25:10.32:77,0,10	0/1:6,0:4:11.08:11,0,24	0/1:10,0:9:23.94:24,0,44	0/1:22,0:19:13.69:135,0,14	1/1:9,0:9:6.82:32,7,0	0/1:33,0:32:32.99:269,0,33	0/1:14,0:13:10.73:11,0,13	1/1:20,0:20:7.08:119,7,0	1/1:8,0:8:8.44:80,8,0	0/1:11,0:9:9.49:9,0,24	1/1:17,1:17:38.54:255,39,0	0/1:19,0:19:15.28:59,0,15	0/1:10,0:8:0.35:87,0,0	0/1:7,0:7:7.62:25,0,8	1/1:14,1:10:21.94:182,22,0	0/1:15,0:14:25.87:86,0,26	1/1:6,0:4:6.25:32,6,0	0/1:13,0:13:8.91:96,0,9	0/1:18,0:18:13.12:129,0,13	1/1:5,0:5:3.78:16,4,0	0/1:11,0:11:19.85:40,0,20	0/1:21,0:20:20.20:147,0,20	1/1:17,0:17:8.89:97,9,0	1/1:7,0:7:5.81:35,6,0
chr10	90025226	.	AG	A	3758.33	PASS	AB=0.981;AC=53;AF=0.946;AN=56;BaseQRankSum=-2.885;DP=427;FS=0.665;HRun=1;HaplotypeScore=73.6302;InbreedingCoeff=0.0395;MQ=49.59;MQ0=22;MQRankSum=2.265;QD=8.80;ReadPosRankSum=-4.493;VQSLOD=-0.7467;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,3:20:25.49:186,25,0	1/1:8,0:8:21.52:177,22,0	0/1:30,0:8:4.66:5,0,37	0/1:31,2:12:10.45:10,0,52	1/1:21,4:25:28.20:181,28,0	1/1:5,1:4:1.51:18,2,0	1/1:10,0:9:0.84:42,1,0	1/1:21,0:18:25.31:171,25,0	1/1:8,1:9:8.61:51,9,0	1/1:31,2:32:55.45:407,55,0	1/1:12,1:12:13.10:101,13,0	1/1:19,1:20:29.14:204,29,0	1/1:7,1:8:13.44:120,13,0	0/1:11,0:9:0.49:15,0,0	1/1:12,6:17:44.15:381,44,0	1/1:14,5:19:11.34:140,11,0	1/1:5,5:8:12.66:150,13,0	1/1:7,0:7:7.79:50,8,0	1/1:13,2:10:23.73:192,24,0	1/1:14,1:14:19.83:144,20,0	1/1:6,0:4:5.25:25,5,0	1/1:11,1:12:2.51:125,3,0	1/1:17,1:18:22.71:196,23,0	1/1:4,1:5:3.87:51,4,0	1/1:10,1:11:9.31:108,9,0	1/1:20,0:19:34.87:254,35,0	1/1:17,0:17:29.55:195,30,0	1/1:3,1:4:5.98:60,6,0
chr10	90025229	.	AAG	A	490.26	PASS	AB=0.983;AC=22;AF=0.393;AN=56;BaseQRankSum=0.984;DP=449;FS=5.861;HRun=0;HaplotypeScore=98.6754;InbreedingCoeff=-0.3835;MQ=54.46;MQ0=22;MQRankSum=2.353;QD=1.58;ReadPosRankSum=-0.977;VQSLOD=1.1128;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:19:50.29:50,0,83	0/1:8,0:8:21.79:22,0,97	0/0:32,0:11:5.29:0,5,91	0/0:36,0:15:6.91:0,7,75	0/1:25,0:25:40.48:40,0,53	0/0:7,0:5:9.39:0,9,85	0/0:11,0:10:15.12:0,15,116	0/1:23,0:20:43.20:43,0,113	0/1:9,0:9:4.25:4,0,13	0/1:34,0:33:11.22:11,0,300	0/1:14,0:13:14.29:14,0,47	0/1:21,1:22:40.82:69,0,41	0/1:9,0:9:10.65:47,0,11	0/1:13,1:12:31.98:46,0,32	0/0:17,0:17:35.91:0,36,265	0/0:20,0:20:16.68:0,17,113	0/1:10,0:8:9.68:10,0,84	0/1:7,1:8:19.25:19,0,20	1/1:16,0:11:10.76:114,11,0	0/1:16,0:15:25.60:26,0,116	0/1:7,0:5:7.43:7,0,13	0/1:11,1:12:42.43:42,0,63	0/1:18,0:18:8.80:9,0,141	1/1:5,0:5:1.45:5,1,0	0/0:12,0:12:4.85:0,5,154	0/1:21,0:20:60.26:60,0,162	0/1:18,0:18:3.11:3,0,56	0/0:3,0:3:2.94:0,3,18
chr10	90025235	.	GAAA	G	3688.86	PASS	AB=0.789;AC=35;AF=0.625;AN=56;BaseQRankSum=-2.826;DP=469;FS=9.904;HRun=15;HaplotypeScore=96.8824;InbreedingCoeff=0.2221;MQ=60.01;MQ0=21;MQRankSum=1.125;QD=10.79;ReadPosRankSum=0.148;VQSLOD=0.3767;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:19:16.48:153,16,0	0/1:7,0:9:13.78:14,0,152	0/0:37,0:13:11.12:0,11,96	0/0:40,0:18:0.67:0,1,123	0/1:10,14:24:18.65:226,0,19	0/1:6,0:5:10.95:55,0,11	1/1:8,3:10:17.74:200,18,0	1/1:10,13:21:10.61:278,11,0	1/1:3,6:9:2.83:31,3,0	1/1:18,14:33:43.52:499,44,0	0/1:9,7:16:22.56:124,0,23	1/1:18,2:20:13.44:186,13,0	1/1:11,0:11:26.87:257,27,0	0/1:8,5:12:2.41:49,0,2	0/0:18,0:19:40.94:0,41,458	0/1:6,12:18:3.35:103,0,3	0/0:11,0:10:16:0,16,130	0/1:9,0:8:17.14:101,0,17	1/1:13,3:12:19.22:198,19,0	0/1:13,4:16:23.80:192,0,24	1/1:6,1:5:8.15:68,8,0	1/1:6,6:13:13.57:180,14,0	1/1:16,3:19:17.84:249,18,0	0/0:5,0:5:0.34:0,0,10	0/0:8,0:12:13.01:0,13,74	1/1:5,17:23:32.32:381,32,0	0/1:9,7:17:3.50:113,0,4	1/1:4,0:4:2.98:32,3,0
chr10	90025238	.	A	AG	847.81	PASS	AB=0.896;AC=18;AF=0.321;AN=56;BaseQRankSum=0.831;DP=484;FS=1.517;HRun=0;HaplotypeScore=96.4887;InbreedingCoeff=-0.5423;MQ=63.94;MQ0=19;MQRankSum=3.987;QD=2.92;ReadPosRankSum=0.811;VQSLOD=2.9900;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:34.23:0,34,233	0/0:10,0:10:26.98:0,27,240	0/0:47,0:18:0.63:0,1,95	0/0:41,0:18:2.82:0,3,136	0/1:26,0:26:74.82:88,0,75	0/1:5,1:5:28.15:31,0,28	0/1:9,2:10:33.54:34,0,45	0/1:26,0:24:81.23:153,0,81	0/0:9,0:9:0.84:0,1,48	0/1:32,1:32:51.27:51,0,302	0/1:16,0:15:49.66:50,0,59	0/1:18,3:21:67.32:67,0,108	0/1:7,4:11:27.94:71,0,28	0/1:12,1:12:14.48:14,0,79	0/0:18,0:18:50.66:0,51,467	0/0:18,0:18:1.38:0,1,66	0/0:12,0:10:17.79:0,18,174	0/1:8,2:9:26.18:26,0,41	0/1:17,0:13:26.21:97,0,26	0/1:16,2:17:21.85:22,0,95	0/1:5,1:4:11.06:26,0,11	0/1:11,1:12:47.63:48,0,48	0/1:15,4:19:65.35:65,0,96	0/0:5,0:5:2.10:0,2,16	0/0:13,0:13:26.92:0,27,202	0/1:23,0:23:99:109,0,134	0/1:18,0:18:21.39:21,0,72	0/1:1,3:4:13.84:23,0,14
chr10	90025248	.	AAAC	A	1094.76	PASS	AB=0.977;AC=23;AF=0.411;AN=56;BaseQRankSum=6.842;DP=478;FS=3.184;HRun=0;HaplotypeScore=103.7815;InbreedingCoeff=-0.3964;MQ=69.06;MQ0=16;MQRankSum=-3.896;QD=3.30;ReadPosRankSum=6.207;VQSLOD=1.4991;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:18:17.55:18,0,88	0/0:11,0:11:23.45:0,23,272	0/0:44,0:20:6.77:0,7,146	0/0:40,0:18:10.78:0,11,242	0/1:25,0:25:69.64:70,0,144	0/1:9,1:9:22.31:22,0,116	1/1:9,0:8:18.97:91,19,0	0/1:32,0:31:22.42:22,0,320	0/1:8,0:8:6.99:7,0,18	0/1:23,1:24:15.11:200,0,15	0/1:14,1:14:33.14:49,0,33	0/1:17,1:18:10.27:104,0,10	1/1:8,1:9:18.57:103,19,0	0/1:13,0:12:28.31:40,0,28	0/0:18,0:18:36.51:0,37,420	0/1:19,1:20:48.10:48,0,71	0/0:12,0:10:6.42:0,6,206	0/1:9,1:9:3.97:71,0,4	0/1:18,0:16:63.47:63,0,170	0/1:18,0:17:34.12:34,0,68	0/1:6,0:5:20.10:20,0,48	0/1:13,0:13:63.68:64,0,78	0/1:17,0:17:28.20:70,0,28	0/1:6,0:6:9.87:10,0,17	0/0:15,0:15:24.99:0,25,186	0/1:26,0:26:94.68:95,0,142	0/1:15,1:16:37.22:57,0,37	0/0:6,0:6:1.66:0,2,59
chr10	90026718	.	A	ATCTGC	36558.90	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.829;DP=553;FS=0.000;HRun=0;HaplotypeScore=109.1017;InbreedingCoeff=0.9745;MQ=84.06;MQ0=0;MQRankSum=-11.102;QD=72.97;ReadPosRankSum=6.615;VQSLOD=6.1337;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:28:60.21:1961,60,0	1/1:1,7:11:18.06:596,18,0	0/0:29,0:29:84.29:0,84,1800	0/0:23,0:23:40.78:0,41,1094	1/1:0,14:18:36.08:1017,36,0	1/1:1,21:29:63.22:2086,63,0	1/1:1,17:22:42.13:1336,42,0	1/1:0,20:27:78.24:2348,78,0	1/1:0,21:23:66.22:2166,66,0	1/1:0,21:28:68.72:2127,69,0	1/1:0,8:12:21.07:680,21,0	1/1:1,21:26:60.21:1985,60,0	1/1:2,12:18:36.12:1193,36,0	1/1:0,10:11:27.09:893,27,0	1/1:0,27:29:75.26:2455,75,0	1/1:0,24:25:63.22:2089,63,0	1/1:0,13:17:27.09:896,27,0	1/1:0,10:15:27.09:897,27,0	1/1:1,11:21:57.12:1552,57,0	1/1:0,8:10:24.04:660,24,0	1/1:0,12:15:27.09:830,27,0	1/1:0,11:12:30.10:965,30,0	1/1:0,12:14:33.11:1011,33,0	1/1:0,15:18:30.10:993,30,0	1/1:1,18:21:54.19:1789,54,0	1/1:2,16:20:54.17:1674,54,0	1/1:0,21:24:60.21:1990,60,0	1/1:0,6:7:12.04:370,12,0
chr10	90028810	.	A	ATGTGTGTG	3503.98	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=10.238;DP=622;FS=9.234;HRun=0;HaplotypeScore=201.3388;InbreedingCoeff=-0.4278;MQ=58.46;MQ0=5;MQRankSum=-9.613;QD=7.21;ReadPosRankSum=-0.683;VQSLOD=1.6846;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:84.62:0,85,1487	1/1:8,0:8:5.99:83,6,0	0/0:38,0:26:57.05:0,57,1049	0/0:28,0:13:24.10:0,24,588	0/0:19,0:19:18.51:0,19,256	0/1:18,0:18:33.77:34,0,327	0/1:26,0:26:92.42:92,0,482	0/1:27,0:27:12.84:13,0,736	0/1:8,0:8:33.95:91,0,34	0/1:25,0:25:99:342,0,544	0/1:20,0:20:1.89:2,0,359	0/1:31,0:30:61.96:62,0,401	0/1:16,0:16:99:107,0,178	0/1:26,0:26:99:206,0,344	1/1:18,2:21:16.31:323,16,0	0/1:20,0:20:99:476,0,397	1/1:15,6:21:17.75:538,18,0	0/1:16,0:17:99:248,0,285	0/1:26,0:25:42.18:42,0,674	0/1:26,0:26:99:131,0,443	0/0:17,0:17:32.01:0,32,432	0/1:23,0:22:67.13:91,0,67	0/1:21,0:21:99:102,0,398	0/1:28,0:27:68.61:69,0,294	0/1:24,0:22:99:305,0,401	0/1:22,0:22:20.58:21,0,703	0/1:21,0:20:87.44:87,0,393	0/1:11,0:11:39.27:39,0,186
chr10	90029273	.	AT	A	1275.56	PASS	AB=0.938;AC=9;AF=0.161;AN=56;BaseQRankSum=-11.908;DP=595;FS=5.576;HRun=11;HaplotypeScore=120.7309;InbreedingCoeff=0.8431;MQ=65.19;MQ0=1;MQRankSum=2.650;QD=12.38;ReadPosRankSum=2.036;VQSLOD=3.0590;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,30:35:62.90:517,63,0	1/1:0,11:11:29.96:246,30,0	0/0:11,0:9:7.23:0,7,123	0/1:14,1:12:20.65:21,0,99	0/0:19,0:19:39.40:0,39,274	0/0:27,0:27:51.46:0,51,340	0/0:10,0:10:21.82:0,22,134	0/0:32,0:33:61.72:0,62,365	0/0:16,0:16:42.76:0,43,298	0/0:28,0:28:51.95:0,52,316	0/0:17,0:17:34.02:0,34,252	0/0:31,0:32:72.22:0,72,466	0/0:16,0:16:31.64:0,32,241	0/0:22,0:22:51.63:0,52,320	1/1:2,16:18:38.94:320,39,0	0/0:17,0:17:38.39:0,38,262	1/1:5,19:24:15.95:336,16,0	0/0:33,0:34:87.96:0,88,580	0/0:37,0:38:64.50:0,65,407	0/0:19,0:20:40.41:0,40,211	0/0:20,0:19:44.29:0,44,304	0/0:17,0:18:34.89:0,35,193	0/0:18,0:18:34.85:0,35,238	0/0:7,0:7:18.04:0,18,113	0/0:22,0:22:52.91:0,53,334	0/0:31,0:29:57.72:0,58,351	0/0:23,0:23:51.43:0,51,344	0/0:12,0:13:33.31:0,33,193
chr10	90029284	.	TC	T	5678.30	PASS	AB=0.963;AC=49;AF=0.875;AN=56;BaseQRankSum=2.263;DP=569;FS=6.045;HRun=1;HaplotypeScore=100.1823;InbreedingCoeff=0.1951;MQ=60.94;MQ0=4;MQRankSum=0.225;QD=10.32;ReadPosRankSum=3.581;VQSLOD=2.9161;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:36,1:37:33.29:33,0,112	0/1:12,0:12:12.11:12,0,15	0/1:9,0:7:3.05:3,0,50	0/1:11,1:9:11.94:12,0,99	1/1:20,0:20:43.73:244,44,0	1/1:24,1:25:62.42:359,62,0	1/1:15,0:15:38.25:194,38,0	1/1:28,0:27:49.42:313,49,0	1/1:15,0:15:35.97:196,36,0	1/1:21,0:21:48.95:348,49,0	1/1:16,0:16:37.52:188,38,0	1/1:31,0:31:56.82:320,57,0	1/1:17,0:16:36.23:185,36,0	1/1:22,0:22:56.74:281,57,0	0/0:19,0:18:1.90:0,2,38	1/1:12,0:12:28.69:159,29,0	0/1:21,2:23:36.81:60,0,37	1/1:36,0:36:90.12:421,90,0	1/1:26,1:27:39.13:253,39,0	1/1:18,0:18:31.26:237,31,0	1/1:18,0:17:43.28:226,43,0	1/1:20,0:20:49.08:270,49,0	1/1:18,0:18:15.54:171,16,0	1/1:7,0:7:20.45:123,20,0	1/1:24,0:24:49.87:316,50,0	1/1:31,0:29:60.20:392,60,0	1/1:21,0:21:33.31:222,33,0	1/1:15,0:15:13.88:141,14,0
chr10	90029285	.	CT	C	6383.91	PASS	AB=0.900;AC=45;AF=0.804;AN=56;BaseQRankSum=3.053;DP=567;FS=21.930;HRun=11;HaplotypeScore=97.8628;InbreedingCoeff=0.8881;MQ=60.80;MQ0=5;MQRankSum=0.327;QD=13.79;ReadPosRankSum=-0.057;VQSLOD=3.2391;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:75.20:0,75,719	0/0:12,0:12:32.84:0,33,272	0/1:8,1:7:5.85:25,0,6	0/0:12,0:9:14.06:0,14,134	1/1:16,1:17:27.47:211,27,0	1/1:27,0:27:54.78:386,55,0	1/1:11,3:14:35.85:297,36,0	1/1:23,4:26:38.22:333,38,0	1/1:13,1:14:34.31:208,34,0	1/1:21,0:21:32.25:325,32,0	1/1:15,1:16:33.52:218,34,0	1/1:28,2:30:58.73:517,59,0	1/1:17,2:18:25.29:240,25,0	1/1:19,2:21:40.59:275,41,0	0/0:19,0:18:44.98:0,45,407	1/1:11,1:12:14.24:201,14,0	0/0:24,0:24:27.08:0,27,360	1/1:32,4:36:67.70:616,68,0	1/1:27,0:27:35.81:243,36,0	1/1:17,2:19:23.21:181,23,0	1/1:17,1:16:17.13:236,17,0	1/1:20,1:21:32.29:259,32,0	1/1:15,3:18:11.99:243,12,0	1/1:7,0:7:17.58:113,18,0	1/1:23,1:24:28.53:284,29,0	1/1:27,3:28:58.49:477,58,0	1/1:20,2:22:31.40:314,31,0	1/1:13,1:14:23.18:182,23,0
chr10	90041366	.	C	CG	10560.66	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=2.359;DP=397;FS=9.094;HRun=1;HaplotypeScore=155.1503;InbreedingCoeff=0.6081;MQ=39.80;MQ0=16;MQRankSum=-2.312;QD=27.65;ReadPosRankSum=3.450;VQSLOD=3.8859;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:33.11:477,33,0	1/1:2,2:4:6.02:88,6,0	0/1:10,0:5:5.41:5,0,71	0/0:15,0:6:11.74:0,12,107	1/1:5,18:23:35.73:412,36,0	1/1:0,22:22:57.19:833,57,0	1/1:1,17:18:41.73:578,42,0	1/1:7,11:16:31.79:358,32,0	1/1:1,16:16:27.09:397,27,0	1/1:3,12:13:39.10:549,39,0	1/1:1,6:7:18.06:257,18,0	1/1:2,6:8:21.06:291,21,0	1/1:1,11:12:27.09:396,27,0	1/1:2,13:15:29.89:409,30,0	1/1:2,17:19:45.11:635,45,0	1/1:1,12:13:24.04:328,24,0	1/1:3,11:14:27.09:396,27,0	1/1:0,11:11:18.06:266,18,0	1/1:6,16:21:44.99:557,45,0	1/1:4,6:10:18.06:265,18,0	1/1:2,8:10:9.03:132,9,0	1/1:1,9:10:24.01:314,24,0	1/1:1,10:11:24.08:348,24,0	1/1:1,6:7:8.99:108,9,0	1/1:0,8:8:24.08:352,24,0	1/1:4,16:20:54.14:754,54,0	1/1:2,21:22:45.15:659,45,0	1/1:4,7:10:30.06:397,30,0
chr10	90041394	.	C	CTG	16474.52	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=6.699;DP=355;FS=12.658;HRun=0;HaplotypeScore=153.4615;InbreedingCoeff=0.8822;MQ=62.16;MQ0=0;MQRankSum=-7.035;QD=49.47;ReadPosRankSum=5.056;VQSLOD=3.9250;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:33.11:619,33,0	1/1:0,7:7:21.07:392,21,0	0/0:10,0:10:14.86:0,15,408	0/0:12,0:12:17.75:0,18,474	1/1:0,24:24:57.19:1015,57,0	1/1:1,23:24:69.21:1290,69,0	1/1:2,8:10:21.04:394,21,0	1/1:4,20:24:55.31:1109,55,0	1/1:1,9:9:27.09:474,27,0	1/1:0,15:15:45.15:859,45,0	1/1:0,8:8:24.08:439,24,0	1/1:0,7:7:18.06:333,18,0	1/1:1,8:9:24.06:445,24,0	1/1:0,6:6:18.06:331,18,0	1/1:1,19:20:57.17:1066,57,0	1/1:0,14:14:42.14:790,42,0	1/1:1,9:10:21.07:391,21,0	1/1:1,4:5:6.02:115,6,0	1/1:2,12:14:35.72:705,36,0	1/1:2,10:12:36.09:613,36,0	1/1:0,7:7:15.05:277,15,0	1/1:0,7:7:21.07:389,21,0	1/1:3,14:17:37.94:712,38,0	1/1:1,4:5:8.50:161,9,0	1/1:0,11:11:33.11:614,33,0	1/1:0,16:16:48.16:905,48,0	1/1:1,22:23:66.23:1243,66,0	1/1:0,14:14:42.14:795,42,0
chr10	90041396	.	A	ATT	18645.84	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=5.266;DP=409;FS=17.168;HRun=0;HaplotypeScore=162.5559;InbreedingCoeff=0.9234;MQ=58.21;MQ0=0;MQRankSum=-6.745;QD=48.06;ReadPosRankSum=3.452;VQSLOD=3.6530;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:16:36.10:643,36,0	1/1:2,7:9:27.05:469,27,0	0/0:9,0:9:27.09:0,27,427	0/0:12,0:12:33.10:0,33,515	1/1:2,23:25:57.18:1010,57,0	1/1:5,24:29:81.23:1460,81,0	1/1:0,10:10:24.08:433,24,0	1/1:9,20:29:75.25:1402,75,0	1/1:4,8:11:30.10:525,30,0	1/1:3,15:18:54.19:1030,54,0	1/1:3,8:11:30.06:508,30,0	1/1:2,7:9:24.03:378,24,0	1/1:3,8:11:30.10:543,30,0	1/1:3,6:9:24:372,24,0	1/1:3,20:23:66.18:1181,66,0	1/1:2,14:16:48.11:835,48,0	1/1:4,9:13:27.07:470,27,0	1/1:1,4:5:6.02:115,6,0	1/1:2,12:14:42.14:821,42,0	1/1:3,11:14:42.06:698,42,0	1/1:2,7:9:18.02:297,18,0	1/1:3,7:10:30.02:486,30,0	1/1:4,14:18:51.13:897,51,0	1/1:1,5:6:11.53:198,12,0	1/1:2,11:13:36.12:671,36,0	1/1:4,16:20:60.20:1112,60,0	1/1:3,22:25:69.24:1300,69,0	1/1:0,14:14:42.14:794,42,0
chr10	90042663	.	A	AAC	13471.26	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=8.512;DP=626;FS=8.741;HRun=0;HaplotypeScore=114.3705;InbreedingCoeff=0.9943;MQ=76.79;MQ0=1;MQRankSum=-3.948;QD=44.46;ReadPosRankSum=5.376;VQSLOD=6.2041;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:96.19:0,96,1210	0/0:4,0:4:12.03:0,12,148	0/0:17,0:17:38.41:0,38,535	0/0:17,0:17:36.56:0,37,467	1/1:5,34:39:99:1711,99,0	0/0:8,0:8:18.05:0,18,228	0/0:27,0:27:51.12:0,51,655	0/0:20,0:19:54.14:0,54,710	1/1:1,21:21:63.22:1096,63,0	1/1:3,17:20:57.20:990,57,0	1/1:3,21:24:63.22:1100,63,0	1/1:4,26:29:69.24:1190,69,0	1/1:2,16:16:48.16:836,48,0	1/1:2,22:24:63.22:1102,63,0	0/0:20,0:20:42.09:0,42,546	1/1:3,19:22:54.17:915,54,0	0/0:30,0:29:66.16:0,66,852	1/1:4,9:13:24.08:414,24,0	0/0:20,0:19:42.14:0,42,568	0/0:20,0:20:45.10:0,45,587	0/0:29,0:29:66.21:0,66,874	1/1:1,16:17:39.13:666,39,0	1/1:1,23:24:69.02:1180,69,0	1/1:0,25:25:63.21:1086,63,0	1/1:1,23:25:69.24:1184,69,0	0/0:36,1:36:43.69:0,44,1191	0/0:20,0:19:57.19:0,57,768	0/0:16,0:16:39.13:0,39,527
chr10	90042668	.	A	ACC	7877.71	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=14.308;DP=640;FS=14.124;HRun=4;HaplotypeScore=145.7173;InbreedingCoeff=0.9858;MQ=74.09;MQ0=1;MQRankSum=-4.175;QD=25.33;ReadPosRankSum=4.879;VQSLOD=2.7099;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:87.26:0,87,1133	0/0:5,0:5:9.03:0,9,120	0/0:18,0:18:48.13:0,48,575	0/0:14,0:14:30.58:0,31,405	1/1:39,0:39:99:998,99,0	0/0:11,0:11:18.04:0,18,223	0/0:24,0:24:48.14:0,48,624	0/0:22,0:21:60.14:0,60,762	1/1:22,1:22:63.14:677,63,0	1/1:23,0:23:11.46:495,11,0	1/1:23,1:24:63.11:646,63,0	1/1:26,3:28:69.14:755,69,0	1/1:18,1:18:48.10:512,48,0	1/1:25,0:25:63.12:643,63,0	0/0:21,0:21:42.07:0,42,537	1/1:22,1:23:51.08:509,51,0	0/0:33,0:32:69.11:0,69,860	1/1:13,0:13:24.51:236,25,0	0/0:20,0:19:45.01:0,45,574	0/0:21,0:21:42.14:0,42,559	0/0:29,0:29:63.15:0,63,802	1/1:18,0:18:39.08:407,39,0	1/1:23,1:24:68.81:695,69,0	1/1:26,0:26:63.07:628,63,0	1/1:24,1:25:69.04:678,69,0	0/0:38,0:37:70.64:0,71,1174	0/0:21,0:20:57.18:0,57,745	0/0:15,0:15:42.12:0,42,543
chr10	90042703	.	C	CTT	6677.84	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-0.061;DP=555;FS=23.711;HRun=17;HaplotypeScore=125.4954;InbreedingCoeff=0.6020;MQ=58.97;MQ0=18;MQRankSum=-0.657;QD=12.72;ReadPosRankSum=1.537;VQSLOD=2.0131;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:28:57.77:370,58,0	1/1:8,0:8:14.93:121,15,0	0/0:29,0:13:1.41:0,1,51	0/1:17,0:6:1.62:2,0,16	1/1:22,0:21:37.58:289,38,0	1/1:13,0:13:23.91:192,24,0	1/1:16,0:15:23.83:183,24,0	1/1:28,0:28:50.26:386,50,0	1/1:16,0:16:26.77:227,27,0	1/1:22,1:22:56.34:409,56,0	1/1:14,0:14:21.23:162,21,0	1/1:17,0:17:32.90:290,33,0	1/1:15,0:15:23.74:190,24,0	1/1:22,1:22:41.80:379,42,0	1/1:20,0:20:23.90:192,24,0	1/1:17,0:17:26.42:202,26,0	1/1:34,0:30:64.38:524,64,0	1/1:9,0:9:17.96:148,18,0	1/1:36,0:34:33.66:386,34,0	1/1:15,1:16:16.09:123,16,0	1/1:11,0:11:11.95:97,12,0	1/1:16,0:16:26.38:200,26,0	1/1:18,1:18:27.12:193,27,0	1/1:19,0:18:23.98:213,24,0	1/1:20,0:20:23.22:181,23,0	1/1:26,1:27:65.46:493,65,0	1/1:20,2:20:44.43:349,44,0	1/1:16,0:16:23.02:177,23,0
chr10	90042708	.	T	TTTA	6119.67	PASS	AB=0.975;AC=47;AF=0.839;AN=56;BaseQRankSum=-0.681;DP=547;FS=59.640;HRun=0;HaplotypeScore=117.6100;InbreedingCoeff=0.2645;MQ=55.39;MQ0=29;MQRankSum=3.464;QD=12.19;ReadPosRankSum=6.986;VQSLOD=1.8177;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:28:45.91:393,46,0	1/1:7,0:7:14.78:102,15,0	0/0:29,0:12:32.57:0,33,320	0/0:16,0:5:11.58:0,12,90	1/1:22,0:21:31.64:323,32,0	1/1:16,0:16:15.71:158,16,0	0/1:16,0:15:8.18:116,0,8	1/1:28,0:27:27.77:370,28,0	1/1:13,0:12:22.63:222,23,0	1/1:25,0:24:2.32:301,2,0	1/1:14,0:14:1.01:78,1,0	1/1:13,0:13:19.79:185,20,0	1/1:14,0:14:35.79:298,36,0	1/1:21,0:20:38.02:340,38,0	1/1:18,0:18:23.70:168,24,0	1/1:17,0:17:2.41:262,2,0	1/1:36,0:31:56.49:422,56,0	1/1:7,0:7:17.86:127,18,0	0/1:34,1:32:25.56:364,0,26	0/1:18,1:18:10.62:136,0,11	1/1:13,0:11:11.89:83,12,0	1/1:15,0:15:5.12:128,5,0	0/1:19,1:18:13.17:175,0,13	0/1:21,0:18:1.37:155,0,1	1/1:16,0:16:26.40:198,26,0	1/1:30,0:29:44.02:459,44,0	1/1:19,0:17:23.16:291,23,0	1/1:13,1:14:33.17:262,33,0
chr10	90042709	.	T	TTA	12163.31	PASS	AB=0.594;AC=51;AF=0.911;AN=56;BaseQRankSum=-3.230;DP=548;FS=35.001;HRun=0;HaplotypeScore=89.4325;InbreedingCoeff=0.6692;MQ=54.98;MQ0=30;MQRankSum=1.184;QD=24.18;ReadPosRankSum=3.759;VQSLOD=3.2549;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:27:56.76:762,57,0	1/1:0,6:7:15:217,15,0	0/0:29,0:12:32.61:0,33,309	0/0:16,0:5:11.58:0,12,83	1/1:11,11:21:43.10:617,43,0	1/1:3,13:17:15.98:344,16,0	1/1:4,13:16:4.56:245,5,0	1/1:8,20:27:40.79:712,41,0	1/1:8,7:14:35.26:392,35,0	1/1:13,12:24:49.37:725,49,0	1/1:10,4:14:14.57:248,15,0	1/1:6,7:13:33.74:425,34,0	1/1:8,6:14:36.01:435,36,0	1/1:11,10:20:49.74:603,50,0	1/1:2,14:17:24.03:352,24,0	1/1:11,5:16:30.80:424,31,0	1/1:8,27:30:68.94:930,69,0	1/1:0,7:7:18.06:265,18,0	1/1:27,6:30:20.19:709,20,0	0/1:6,11:18:9.36:194,0,9	1/1:3,11:12:11.98:175,12,0	1/1:10,6:16:4.99:283,5,0	1/1:15,5:18:26.34:345,26,0	1/1:9,12:18:40.62:443,41,0	1/1:10,6:16:35.71:372,36,0	1/1:5,25:29:66.32:983,66,0	1/1:14,5:17:43.94:549,44,0	1/1:9,4:14:38.55:413,39,0
chr10	90042710	.	T	TA	3979.36	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=2.387;DP=544;FS=60.269;HRun=0;HaplotypeScore=107.5175;InbreedingCoeff=0.0285;MQ=54.66;MQ0=30;MQRankSum=4.769;QD=7.97;ReadPosRankSum=6.300;VQSLOD=1.1932;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,21:27:43.41:421,43,0	1/1:7,0:7:13.64:66,14,0	0/0:29,0:12:32.37:0,32,307	0/0:16,0:5:11.64:0,12,94	1/1:23,0:22:21.83:220,22,0	1/1:16,0:16:14:88,14,0	0/1:16,0:15:14.42:68,0,14	0/1:29,0:26:8.91:151,0,9	0/1:15,0:14:1.44:136,0,1	0/1:25,0:24:14.67:180,0,15	0/1:14,0:14:10.71:45,0,11	1/1:13,0:13:9.20:104,9,0	1/1:13,0:13:34.33:208,34,0	1/1:20,1:20:21.34:239,21,0	1/1:15,0:15:22.15:100,22,0	0/1:17,0:17:6.83:206,0,7	1/1:32,1:28:61.35:297,61,0	1/1:7,0:7:16.57:75,17,0	0/1:34,0:31:47.03:229,0,47	0/1:19,0:18:15.50:80,0,15	1/1:14,0:12:11.11:55,11,0	1/1:16,0:16:0.48:68,0,0	0/1:20,0:18:35.66:97,0,36	0/1:21,0:18:22.95:101,0,23	1/1:15,1:16:16.11:129,16,0	1/1:29,1:29:28.24:261,28,0	1/1:19,0:17:4:149,4,0	1/1:14,1:15:26.55:209,27,0
chr10	90042712	.	T	TA	182.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.912;DP=535;FS=6.085;HRun=0;HaplotypeScore=117.4189;InbreedingCoeff=0.8462;MQ=53.14;MQ0=32;MQRankSum=0.043;QD=5.70;ReadPosRankSum=1.483;VQSLOD=2.9447;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,21:28:23.98:276,24,0	0/0:7,0:7:14.97:0,15,124	0/0:28,0:11:22.89:0,23,301	0/0:16,0:5:4.96:0,5,44	0/0:22,0:21:56.01:0,56,386	0/0:16,0:16:26.90:0,27,214	0/0:17,0:15:22.91:0,23,157	0/0:28,0:25:68.30:0,68,480	0/0:14,0:13:36.39:0,36,213	0/0:26,0:25:70.54:0,71,498	0/0:14,0:14:29.41:0,29,169	0/0:13,0:13:36.07:0,36,227	0/0:12,0:12:31.43:0,31,191	0/0:21,0:20:51.47:0,51,331	0/0:16,0:16:25.40:0,25,191	0/0:16,0:16:43.41:0,43,278	0/0:34,0:28:66.25:0,66,482	0/0:7,0:7:17.76:0,18,118	0/0:30,0:28:73.36:0,73,550	0/0:18,0:17:28.22:0,28,186	0/0:12,0:10:14.95:0,15,119	0/0:16,0:16:33.03:0,33,225	0/0:20,0:18:47.07:0,47,286	0/0:22,0:19:37.92:0,38,243	0/0:16,0:16:40.67:0,41,260	0/0:29,0:28:77.03:0,77,602	0/0:19,0:17:48.13:0,48,339	0/0:14,0:14:33.70:0,34,215
chr10	90042802	.	AG	A	5841.37	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=2.637;DP=307;FS=0.956;HRun=3;HaplotypeScore=130.0103;InbreedingCoeff=0.6109;MQ=75.56;MQ0=4;MQRankSum=-5.808;QD=20.86;ReadPosRankSum=5.282;VQSLOD=4.1082;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:15:42.52:397,43,0	1/1:1,4:5:12.02:114,12,0	0/0:25,0:14:16.15:0,16,273	0/1:30,0:17:3.45:3,0,97	1/1:0,15:12:33.04:312,33,0	1/1:0,11:11:33.04:315,33,0	1/1:0,10:10:30.04:284,30,0	1/1:1,9:9:23.99:219,24,0	1/1:0,3:3:9.01:84,9,0	1/1:0,7:7:18.02:168,18,0	1/1:0,12:11:30.05:294,30,0	1/1:0,10:8:24.04:232,24,0	1/1:0,18:12:33.04:310,33,0	1/1:0,13:13:36.03:334,36,0	1/1:0,9:8:23.71:216,24,0	1/1:0,11:8:21.02:198,21,0	1/1:1,14:12:33.05:318,33,0	1/1:0,5:5:15.02:144,15,0	1/1:0,6:6:12.01:113,12,0	1/1:0,12:12:35.99:337,36,0	1/1:0,3:3:6.48:58,6,0	1/1:0,6:6:15.03:147,15,0	1/1:0,10:10:26.99:253,27,0	1/1:1,3:4:6.01:58,6,0	1/1:0,7:6:18.03:174,18,0	1/1:1,11:11:30.04:283,30,0	1/1:1,11:12:30.04:290,30,0	1/1:0,6:7:20.63:186,21,0
chr10	90042959	.	G	GC	17434.25	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.217;DP=523;FS=2.668;HRun=0;HaplotypeScore=111.4366;InbreedingCoeff=0.9863;MQ=72.21;MQ0=0;MQRankSum=-7.144;QD=35.36;ReadPosRankSum=5.149;VQSLOD=4.4271;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:30:87.18:1167,87,0	1/1:0,7:7:21.07:286,21,0	0/0:13,0:13:33.11:0,33,453	0/0:16,0:15:41.31:0,41,513	1/1:0,25:25:69.22:927,69,0	1/1:0,23:23:60.20:819,60,0	1/1:0,18:18:48.16:657,48,0	1/1:2,24:26:71.39:948,71,0	1/1:0,15:15:45.15:620,45,0	1/1:1,14:15:42.14:575,42,0	1/1:1,20:21:60.20:810,60,0	1/1:0,12:12:36.12:491,36,0	1/1:0,16:13:33.11:442,33,0	1/1:0,21:21:54.18:730,54,0	1/1:2,16:17:39.13:537,39,0	1/1:0,18:16:48.16:651,48,0	1/1:0,30:30:90.30:1233,90,0	1/1:2,27:29:61.61:857,62,0	1/1:1,17:18:48.16:653,48,0	1/1:3,14:17:36.05:458,36,0	1/1:1,24:25:56.08:782,56,0	1/1:0,10:10:21.07:286,21,0	1/1:0,9:9:24.08:326,24,0	1/1:0,20:20:57.19:786,57,0	1/1:0,16:16:39.13:529,39,0	1/1:1,25:26:68.72:884,69,0	1/1:0,22:22:57.19:774,57,0	1/1:0,5:5:15.05:207,15,0
chr10	90043519	.	C	CG	6812.87	PASS	AB=0.818;AC=55;AF=0.982;AN=56;BaseQRankSum=-2.771;DP=235;FS=9.049;HRun=3;HaplotypeScore=60.8392;InbreedingCoeff=-0.0468;MQ=56.38;MQ0=0;MQRankSum=-2.853;QD=28.99;ReadPosRankSum=0.971;VQSLOD=3.5808;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:19:30.01:374,30,0	1/1:1,1:2:3.01:42,3,0	1/1:2,2:4:6.02:84,6,0	0/1:7,2:9:21.78:142,0,22	1/1:3,12:15:11.99:166,12,0	1/1:1,7:8:21.07:292,21,0	1/1:1,10:11:30.10:417,30,0	1/1:0,6:6:18.06:250,18,0	1/1:0,6:6:15.05:208,15,0	1/1:1,7:8:21.07:291,21,0	1/1:0,8:8:12.04:165,12,0	1/1:0,5:5:15.05:209,15,0	1/1:0,12:12:33.07:437,33,0	1/1:1,6:7:15.05:209,15,0	1/1:0,9:9:27.05:351,27,0	1/1:0,7:7:21.07:292,21,0	1/1:1,14:15:24.08:335,24,0	1/1:1,4:5:12.04:167,12,0	1/1:2,7:9:21.06:276,21,0	1/1:0,9:9:18.03:230,18,0	1/1:1,6:7:11.99:144,12,0	1/1:1,2:3:6.02:84,6,0	1/1:1,8:10:24.04:311,24,0	1/1:0,4:4:3.01:42,3,0	1/1:1,8:9:21.07:292,21,0	1/1:0,14:14:36.12:501,36,0	1/1:0,9:9:21.07:292,21,0	1/1:0,5:5:15.05:209,15,0
chr10	90045435	.	T	TTG	1647.47	PASS	AB=0.798;AC=16;AF=0.320;AN=50;BaseQRankSum=-7.175;DP=572;FS=4.737;HRun=0;HaplotypeScore=97.8503;InbreedingCoeff=0.0482;MQ=62.19;MQ0=21;MQRankSum=2.578;QD=6.62;ReadPosRankSum=0.614;VQSLOD=2.9084;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:39:8.95:0,9,43	0/0:4,0:8:11.36:0,11,56	./.	./.	0/1:12,5:17:14.35:80,0,14	0/0:11,0:18:8.52:0,9,42	0/0:19,0:27:19.79:0,20,96	0/0:32,0:28:1.31:0,1,4	0/1:13,6:19:49.69:118,0,50	1/1:14,0:19:5.99:60,6,0	./.	1/1:13,6:18:6.02:89,6,0	0/1:7,6:13:17.37:163,0,17	0/1:17,1:18:27.06:27,0,103	0/0:6,0:19:19.45:0,19,97	0/1:11,7:19:14.32:186,0,14	0/0:16,0:16:2.84:0,3,14	0/1:8,6:15:7.42:147,0,7	0/1:19,0:22:0.42:0,0,21	0/0:10,0:17:11.58:0,12,57	0/0:23,0:25:11.36:0,11,56	0/1:13,4:17:36.34:60,0,36	0/1:11,3:14:13.14:38,0,13	1/1:18,17:35:27.23:563,27,0	0/1:15,4:20:3.57:267,0,4	0/0:14,0:24:10.10:0,10,45	0/0:18,0:24:8.30:0,8,42	0/0:6,0:8:5.68:0,6,28
chr10	90046015	.	CAT	C	440.84	PASS	AB=0.858;AC=12;AF=0.240;AN=50;BaseQRankSum=3.937;DP=262;FS=0.000;HRun=0;HaplotypeScore=37.4224;InbreedingCoeff=-0.1075;MQ=70.85;MQ0=4;MQRankSum=0.330;QD=3.04;ReadPosRankSum=0.493;VQSLOD=0.6892;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,10:15:24.03:273,24,0	0/0:1,0:1:2.94:0,3,18	0/1:15,0:8:0.03:0,0,0	0/0:18,0:6:4.54:0,5,27	0/1:6,2:8:21.08:21,0,161	0/1:11,1:12:12.11:12,0,313	0/0:6,0:6:6.02:0,6,96	0/1:30,3:32:59.93:60,0,670	0/0:5,0:5:12.02:0,12,168	0/0:6,0:6:15.05:0,15,241	0/0:9,0:9:3.01:0,3,48	0/0:4,0:5:6.01:0,6,75	0/0:7,0:7:9.03:0,9,145	0/0:9,0:9:9.03:0,9,136	0/0:5,0:8:1.25:0,1,15	0/0:5,0:5:6.02:0,6,96	0/0:9,0:19:17.97:0,18,158	0/1:9,2:14:42.30:42,0,314	0/0:8,0:8:9.03:0,9,145	./.	0/0:9,0:8:6.02:0,6,96	./.	./.	0/1:1,1:2:4.58:31,0,5	0/1:4,2:7:68.44:68,0,127	0/1:12,1:13:15.13:15,0,267	0/1:12,1:13:12.06:12,0,297	0/1:9,2:11:42.28:42,0,334
chr10	90048934	.	CA	C	1475.75	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.878;DP=699;FS=0.000;HRun=1;HaplotypeScore=71.7235;InbreedingCoeff=0.9994;MQ=77.00;MQ0=2;MQRankSum=-3.912;QD=32.79;ReadPosRankSum=2.584;VQSLOD=3.3774;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,45:45:99:1571,114,0	0/0:14,0:14:42.14:0,42,671	0/0:24,0:22:55.41:0,55,748	0/0:38,1:36:64.79:0,65,1272	0/0:37,0:37:99:0,111,1737	0/0:18,0:17:48.16:0,48,765	0/0:29,0:29:87.24:0,87,1294	0/0:24,0:24:65.84:0,66,942	0/0:24,0:24:72.23:0,72,1126	0/0:25,0:25:72.21:0,72,1058	0/0:29,0:29:87.26:0,87,1308	0/0:26,0:26:78.24:0,78,1219	0/0:15,0:15:45.15:0,45,716	0/0:22,0:22:66.19:0,66,1006	0/0:26,0:26:78.22:0,78,1163	0/0:26,0:26:78.27:0,78,1244	0/0:35,0:35:99:0,105,1646	0/0:21,0:21:60.13:0,60,885	0/0:20,0:20:57.19:0,57,901	0/0:23,0:23:69.22:0,69,1074	0/0:24,0:24:65.30:0,65,985	0/0:19,0:19:57.19:0,57,903	0/0:19,0:19:54.18:0,54,843	0/0:28,0:28:84.27:0,84,1313	0/0:22,0:22:66.22:0,66,1046	0/0:20,0:20:60.20:0,60,937	0/0:33,0:33:99:0,99,1546	0/0:10,0:10:30.10:0,30,479
chr10	90051293	.	T	TC	25669.61	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.831;DP=685;FS=14.880;HRun=3;HaplotypeScore=58.5658;InbreedingCoeff=0.8321;MQ=75.33;MQ0=0;MQRankSum=-5.914;QD=39.19;ReadPosRankSum=3.251;VQSLOD=3.4273;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,42:43:99:1596,114,0	1/1:0,10:10:27.09:378,27,0	0/0:14,0:14:12.87:0,13,117	0/0:16,0:16:0.11:0,0,111	1/1:4,31:35:96.32:1334,96,0	1/1:2,26:28:78.26:1091,78,0	1/1:0,14:14:39.13:545,39,0	1/1:1,22:23:63.20:866,63,0	1/1:1,21:22:60.20:840,60,0	1/1:0,28:28:84.28:1173,84,0	1/1:2,27:29:81.27:1134,81,0	1/1:1,25:26:69.23:966,69,0	1/1:2,24:26:69.23:966,69,0	1/1:0,20:20:57.19:797,57,0	1/1:0,32:32:90.30:1260,90,0	1/1:0,30:30:87.29:1219,87,0	1/1:0,16:16:45.15:630,45,0	1/1:2,30:32:90.30:1260,90,0	1/1:1,16:17:48.15:656,48,0	1/1:1,32:33:93.31:1301,93,0	1/1:1,23:24:63.21:882,63,0	1/1:0,21:21:60.20:840,60,0	1/1:1,27:28:75.25:1049,75,0	1/1:0,24:24:72.24:1008,72,0	1/1:0,13:13:39.13:546,39,0	1/1:1,34:35:99:1445,105,0	1/1:2,31:33:96.32:1340,96,0	1/1:0,13:13:39.13:546,39,0
chr10	90053547	.	AT	A	10676.63	PASS	AB=0.550;AC=45;AF=0.804;AN=56;BaseQRankSum=4.054;DP=574;FS=2.872;HRun=10;HaplotypeScore=59.2732;InbreedingCoeff=0.8980;MQ=64.21;MQ0=1;MQRankSum=-1.087;QD=21.53;ReadPosRankSum=1.504;VQSLOD=5.9426;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:80.98:703,81,0	0/0:6,0:6:12.03:0,12,132	0/0:7,0:6:18:0,18,185	0/0:17,0:16:32.92:0,33,328	1/1:3,26:30:77.01:657,77,0	1/1:2,23:25:65.98:573,66,0	1/1:3,15:18:44.99:391,45,0	1/1:3,15:18:44.99:391,45,0	1/1:2,17:19:47.99:417,48,0	1/1:3,22:24:62.98:547,63,0	1/1:1,16:17:44.99:391,45,0	1/1:0,16:16:41.99:365,42,0	1/1:2,16:18:41.98:365,42,0	1/1:2,18:20:47.99:417,48,0	0/0:18,0:18:48.12:0,48,522	1/1:3,19:22:56.99:495,57,0	0/0:30,0:30:87.22:0,87,953	1/1:1,21:22:37.34:472,37,0	1/1:3,13:16:8.82:305,9,0	0/1:4,18:22:2.94:363,0,3	1/1:3,30:33:83.98:729,84,0	1/1:2,18:20:47.98:417,48,0	1/1:3,17:20:47.97:417,48,0	1/1:0,14:14:41.99:365,42,0	1/1:0,20:20:56.99:495,57,0	1/1:5,24:29:71.91:618,72,0	1/1:5,26:32:77:657,77,0	1/1:1,7:8:15:130,15,0
chr10	90054947	.	AGC	A	26424.98	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=8.358;DP=716;FS=5.629;HRun=0;HaplotypeScore=95.5833;InbreedingCoeff=0.9968;MQ=91.27;MQ0=0;MQRankSum=-7.327;QD=44.86;ReadPosRankSum=5.742;VQSLOD=6.1971;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,47:47:99:2007,123,0	0/0:6,0:6:18.06:0,18,366	0/0:24,0:24:72.25:0,72,1431	0/0:32,0:32:87.30:0,87,1656	1/1:1,24:25:75.25:1186,75,0	1/1:0,24:24:66.23:1077,66,0	1/1:0,28:28:68.97:1126,69,0	1/1:0,16:16:45.14:710,45,0	1/1:0,28:28:75.26:1213,75,0	1/1:0,18:18:54.18:881,54,0	1/1:0,11:11:30.10:490,30,0	1/1:0,33:33:90.27:1467,90,0	1/1:0,33:33:87.16:1419,87,0	1/1:0,28:28:72.25:1175,72,0	0/0:27,0:27:81.26:0,81,1582	1/1:0,24:24:60.20:979,60,0	0/0:38,0:38:99:0,114,2205	1/1:0,28:28:75.26:1224,75,0	1/1:1,22:23:69.18:1067,69,0	1/1:0,12:12:36.12:576,36,0	1/1:1,65:66:99:3127,193,0	1/1:0,21:21:57.19:930,57,0	1/1:1,8:9:27.09:414,27,0	1/1:0,33:33:90.31:1468,90,0	1/1:0,16:16:48.16:783,48,0	1/1:0,27:27:81.28:1307,81,0	1/1:0,31:31:90.31:1457,90,0	1/1:0,8:8:21.07:343,21,0
chr10	90055537	.	GA	G	540.38	PASS	AB=0.935;AC=4;AF=0.071;AN=56;BaseQRankSum=6.206;DP=619;FS=8.337;HRun=11;HaplotypeScore=69.7630;InbreedingCoeff=0.4136;MQ=73.84;MQ0=0;MQRankSum=-0.165;QD=7.95;ReadPosRankSum=0.198;VQSLOD=1.8100;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,28:34:74.89:616,75,0	0/0:5,0:5:14.95:0,15,145	0/0:18,1:18:11.35:0,11,284	0/1:14,0:12:16.36:16,0,55	0/0:34,2:36:61.69:0,62,836	0/0:11,0:11:27.07:0,27,288	0/1:17,3:20:22.80:23,0,397	0/0:27,1:29:36.21:0,36,556	0/0:14,0:14:36.55:0,37,376	0/0:37,0:37:77.29:0,77,825	0/0:17,0:17:37.32:0,37,378	0/0:20,1:21:23.46:0,23,445	0/0:17,1:18:26.46:0,26,467	0/0:15,0:15:38.57:0,39,379	0/0:25,0:25:51.04:0,51,526	0/0:21,0:21:51.13:0,51,542	0/0:29,0:29:79.03:0,79,813	0/0:34,0:34:62.45:0,62,826	0/0:7,0:8:17.88:0,18,174	0/0:18,2:21:4.66:0,5,432	0/0:18,1:20:25:0,25,442	0/0:27,0:27:63.14:0,63,658	0/0:24,0:24:54.11:0,54,561	0/0:21,0:22:53.92:0,54,539	0/0:24,0:24:66.15:0,66,691	0/0:29,1:30:44.52:0,45,667	0/0:26,1:27:38.47:0,38,596	0/0:15,0:17:41.81:0,42,412
chr10	90062165	.	C	CT	6248.07	PASS	AB=0.853;AC=46;AF=0.821;AN=56;BaseQRankSum=-0.454;DP=555;FS=12.463;HRun=12;HaplotypeScore=99.3823;InbreedingCoeff=0.4874;MQ=66.58;MQ0=5;MQRankSum=-3.604;QD=12.91;ReadPosRankSum=-0.976;VQSLOD=3.1896;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,18:41:15.60:593,16,0	0/1:8,1:9:8.33:8,0,109	0/0:25,0:10:14.08:0,14,88	0/1:29,0:20:4.43:4,0,61	1/1:13,7:21:7.12:240,7,0	1/1:7,6:14:4.97:192,5,0	1/1:4,8:13:35.85:321,36,0	1/1:21,13:32:40.61:380,41,0	1/1:6,4:10:15.02:145,15,0	1/1:5,14:19:34.24:310,34,0	1/1:12,10:22:36.04:344,36,0	1/1:11,9:22:29.28:276,29,0	0/1:6,10:16:8.03:256,0,8	1/1:4,6:11:12.44:246,12,0	0/0:20,0:20:47.69:0,48,350	1/1:8,6:15:35.86:320,36,0	0/0:26,0:26:59.58:0,60,437	1/1:12,9:21:12.95:298,13,0	0/1:23,1:25:99:116,0,104	1/1:8,11:19:13.82:281,14,0	1/1:8,11:19:14.10:289,14,0	1/1:4,8:12:27.04:263,27,0	1/1:9,7:16:5.05:199,5,0	1/1:11,13:24:41.94:392,42,0	1/1:10,8:20:12.15:221,12,0	1/1:10,9:20:10.98:255,11,0	1/1:18,5:22:25.21:217,25,0	1/1:7,0:7:9:83,9,0
chr10	90062194	.	CT	C	6065.50	PASS	AB=0.971;AC=45;AF=0.804;AN=56;BaseQRankSum=3.705;DP=521;FS=27.229;HRun=9;HaplotypeScore=74.5392;InbreedingCoeff=0.8585;MQ=59.08;MQ0=18;MQRankSum=-3.163;QD=14.51;ReadPosRankSum=2.364;VQSLOD=3.2524;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,22:37:64.96:619,65,0	0/0:8,0:8:21.06:0,21,253	0/1:33,0:7:3.11:3,0,72	0/0:43,0:19:18.01:0,18,191	1/1:8,15:23:25.28:258,25,0	1/1:7,7:14:29.94:283,30,0	1/1:2,9:11:21.02:203,21,0	1/1:12,13:23:36.04:346,36,0	1/1:0,6:6:12.02:115,12,0	1/1:12,4:16:23.97:217,24,0	1/1:7,9:16:18.01:173,18,0	1/1:8,8:16:20.98:197,21,0	1/1:3,13:16:27.04:261,27,0	1/1:2,15:17:32.95:318,33,0	0/0:19,0:19:48.13:0,48,568	1/1:3,11:14:29.99:280,30,0	0/0:31,0:31:72.19:0,72,850	1/1:5,15:20:36.05:345,36,0	1/1:9,10:17:21.01:203,21,0	1/1:6,11:17:29.33:282,29,0	1/1:1,5:6:12.02:116,12,0	1/1:2,8:10:18.02:174,18,0	1/1:7,12:19:35.93:339,36,0	1/1:15,9:24:44.06:415,44,0	1/1:6,13:19:18.99:271,19,0	1/1:6,13:19:36.04:342,36,0	1/1:6,14:20:24.33:307,24,0	0/0:1,0:1:1.55:0,2,4
chr10	90062327	.	A	ACTTTT	11621.17	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-0.118;DP=467;FS=26.653;HRun=0;HaplotypeScore=103.6612;InbreedingCoeff=0.8635;MQ=76.22;MQ0=9;MQRankSum=-5.650;QD=33.98;ReadPosRankSum=1.269;VQSLOD=2.3898;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:21.19:0,21,140	0/0:4,0:4:9.02:0,9,144	0/0:43,0:22:44.13:0,44,365	0/0:36,0:18:10.12:0,10,124	1/1:34,0:34:68.58:1075,69,0	1/1:11,0:11:15.05:336,15,0	1/1:16,0:16:21.07:424,21,0	1/1:19,0:19:43.50:465,43,0	1/1:10,0:10:4.10:323,4,0	1/1:12,7:19:53.93:935,54,0	1/1:25,0:25:65.62:1135,66,0	1/1:9,0:9:17.91:297,18,0	1/1:16,0:16:35.91:637,36,0	1/1:14,0:14:35.17:599,35,0	0/0:6,0:6:15.01:0,15,162	1/1:14,0:14:24.08:544,24,0	0/0:23,0:23:49.96:0,50,627	1/1:17,0:17:38.80:471,39,0	1/1:21,0:21:56.71:713,57,0	1/1:11,0:11:23.95:390,24,0	1/1:14,0:14:9.01:198,9,0	1/1:27,0:27:59.72:985,60,0	1/1:12,0:12:32.99:597,33,0	1/1:7,0:7:3.01:58,3,0	1/1:9,0:9:24.05:465,24,0	1/1:17,0:18:47.73:711,48,0	1/1:12,0:12:10.99:198,11,0	1/1:7,0:7:4.78:68,5,0
chr10	90062328	.	C	CTTTTT	7632.86	PASS	AB=0.996;AC=36;AF=0.643;AN=56;BaseQRankSum=5.824;DP=479;FS=17.143;HRun=4;HaplotypeScore=125.8174;InbreedingCoeff=0.1795;MQ=74.31;MQ0=10;MQRankSum=-7.624;QD=21.03;ReadPosRankSum=2.642;VQSLOD=0.8025;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:78.89:79,0,270	0/0:4,0:4:9.03:0,9,166	0/0:42,0:21:44.31:0,44,523	0/0:38,0:18:12.96:0,13,189	1/1:33,0:33:22.84:690,23,0	1/1:11,0:11:15.05:246,15,0	1/1:16,1:17:24.03:377,24,0	0/1:19,0:19:42.07:137,0,42	0/1:10,0:10:60.52:214,0,61	1/1:20,0:20:39.62:639,40,0	1/1:25,0:25:27.16:715,27,0	1/1:6,1:9:11.27:219,11,0	1/1:16,0:16:5.14:385,5,0	0/1:14,0:14:26.14:373,0,26	0/0:6,0:6:17.99:0,18,249	1/1:15,0:15:27.07:450,27,0	0/0:22,0:23:41.02:0,41,846	0/1:20,0:20:8.46:356,0,8	0/1:21,1:22:17.12:360,0,17	1/1:10,1:11:17.40:278,17,0	0/1:14,0:14:32.07:144,0,32	0/1:27,0:27:18.19:577,0,18	1/1:12,0:12:22.97:412,23,0	1/1:7,0:7:3.01:33,3,0	1/1:10,0:10:19.91:385,20,0	1/1:18,0:18:23.72:390,24,0	0/1:13,0:12:10.11:136,0,10	0/1:7,0:7:14.74:39,0,15
chr10	90062337	.	T	TCTTTTC	12974.14	PASS	AB=0.808;AC=42;AF=0.750;AN=56;BaseQRankSum=-5.520;DP=521;FS=0.000;HRun=0;HaplotypeScore=109.0280;InbreedingCoeff=0.6775;MQ=71.16;MQ0=11;MQRankSum=-3.197;QD=35.64;ReadPosRankSum=5.849;VQSLOD=4.4765;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:5.72:0,6,239	0/0:4,0:4:12.01:0,12,202	0/0:56,0:21:46.81:0,47,531	0/0:51,0:23:22.17:0,22,250	1/1:6,14:30:38.56:1027,39,0	1/1:0,5:11:15.05:431,15,0	1/1:4,10:20:14.63:554,15,0	1/1:4,12:19:37.02:802,37,0	0/1:8,0:10:43.37:213,0,43	1/1:13,0:22:30.29:867,30,0	1/1:12,0:26:59.43:1127,59,0	1/1:8,0:10:14.52:258,15,0	1/1:7,0:16:40.40:695,40,0	0/1:13,0:18:12.26:365,0,12	0/0:8,0:8:24.06:0,24,368	1/1:8,6:18:3.07:361,3,0	0/0:25,0:25:68.21:0,68,1148	1/1:18,0:21:3.14:516,3,0	1/1:5,14:27:33.78:1103,34,0	1/1:0,11:12:23.99:594,24,0	1/1:3,4:10:11.14:356,11,0	1/1:14,0:25:38.82:953,39,0	1/1:8,0:13:17.72:363,18,0	1/1:1,0:7:4.26:85,4,0	1/1:7,0:11:19.53:465,20,0	1/1:0,15:22:63.10:1391,63,0	1/1:2,7:11:11.25:297,11,0	1/1:1,0:4:9.03:148,9,0
chr10	90062338	.	T	TTTTC	4727.79	PASS	AB=0.865;AC=30;AF=0.536;AN=56;BaseQRankSum=8.128;DP=512;FS=4.374;HRun=0;HaplotypeScore=114.9480;InbreedingCoeff=-0.0583;MQ=70.28;MQ0=11;MQRankSum=-4.270;QD=13.36;ReadPosRankSum=7.468;VQSLOD=3.6921;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:21.98:0,22,139	0/0:4,0:4:9.02:0,9,132	0/0:56,0:21:19.59:0,20,210	0/0:52,0:23:14:0,14,161	0/1:21,7:28:63.13:381,0,63	0/1:8,2:10:2.45:155,0,2	0/1:17,1:18:19.45:175,0,19	0/1:17,0:17:61.54:93,0,62	0/1:8,2:10:34.94:102,0,35	0/1:15,8:23:16.44:452,0,16	1/1:19,8:27:36.18:536,36,0	1/1:8,2:10:0.28:133,0,0	0/1:9,7:16:3.63:308,0,4	0/1:16,3:19:46.84:190,0,47	0/0:8,0:8:21.02:0,21,223	0/1:16,3:19:4.21:186,0,4	0/0:25,0:25:64.34:0,64,737	0/1:19,2:21:98.22:264,0,98	0/1:22,3:25:99:201,0,121	1/1:12,0:12:7.19:137,7,0	1/1:8,0:8:2.91:107,3,0	0/1:18,7:25:24.75:486,0,25	1/1:9,4:13:3.27:176,3,0	1/1:6,1:7:6:61,6,0	1/1:7,4:11:18.47:243,18,0	0/1:18,1:19:37.23:247,0,37	1/1:11,0:11:9.88:80,10,0	0/1:4,0:4:14.32:14,0,50
chr10	90062339	.	T	TTTC	1703.77	PASS	AB=0.971;AC=24;AF=0.429;AN=56;BaseQRankSum=11.939;DP=512;FS=10.043;HRun=0;HaplotypeScore=117.0799;InbreedingCoeff=-0.4352;MQ=69.47;MQ0=11;MQRankSum=-4.196;QD=4.80;ReadPosRankSum=9.031;VQSLOD=0.1411;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:17.46:0,17,135	0/0:4,0:4:9.02:0,9,121	0/0:55,0:20:17.53:0,18,236	0/0:52,0:23:3.67:0,4,125	0/1:27,1:28:99:145,0,150	0/1:10,0:10:8.47:55,0,8	0/1:17,1:18:47.52:78,0,48	0/1:17,0:17:43.45:43,0,112	0/1:10,0:10:17.98:18,0,127	0/1:23,0:24:81.35:155,0,81	0/1:22,5:27:40.01:335,0,40	0/1:10,0:10:24.64:25,0,33	0/1:16,0:16:5.93:132,0,6	0/1:18,1:19:42.55:43,0,233	0/0:8,0:8:21:0,21,198	0/1:18,1:19:63.09:63,0,158	0/0:25,0:25:64.63:0,65,707	0/1:21,1:22:75.12:75,0,203	0/1:23,1:24:99:100,0,169	0/1:12,0:12:8.09:47,0,8	1/1:8,0:8:1.03:40,1,0	0/1:22,3:25:99:222,0,139	0/1:14,0:14:39.03:39,0,109	0/1:7,0:7:0.61:33,0,1	0/1:11,0:11:28.86:79,0,29	0/1:18,0:18:75.66:100,0,76	1/1:12,0:11:4.96:31,5,0	0/1:4,0:4:0.65:1,0,56
chr10	90062929	.	AAG	A	11192.20	PASS	AB=0.986;AC=50;AF=0.893;AN=56;BaseQRankSum=3.436;DP=499;FS=29.766;HRun=0;HaplotypeScore=132.9438;InbreedingCoeff=0.1360;MQ=45.49;MQ0=20;MQRankSum=-0.626;QD=22.56;ReadPosRankSum=1.376;VQSLOD=3.4012;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:32.99:386,33,0	0/0:3,0:2:4.99:0,5,25	0/1:60,1:10:70.67:71,0,148	0/1:48,2:13:52.63:53,0,244	1/1:9,9:18:44.83:541,45,0	1/1:3,5:8:24.08:324,24,0	1/1:18,15:33:81.23:1079,81,0	1/1:4,12:16:8.21:380,8,0	1/1:5,10:15:39.06:486,39,0	1/1:12,11:23:66.08:900,66,0	1/1:4,8:12:30.08:397,30,0	1/1:5,12:17:42.14:557,42,0	1/1:2,14:16:48.12:595,48,0	1/1:5,8:13:36.11:473,36,0	0/1:17,0:17:78.85:79,0,122	1/1:6,11:16:45.08:536,45,0	0/1:11,0:11:23.04:23,0,78	1/1:12,7:19:36.10:453,36,0	1/1:7,4:12:1.06:306,1,0	1/1:5,2:7:21.04:253,21,0	1/1:14,9:23:42.08:568,42,0	1/1:8,7:15:45.07:542,45,0	1/1:3,4:7:21.06:276,21,0	1/1:10,9:19:33.07:409,33,0	1/1:2,11:13:24.08:324,24,0	1/1:2,12:14:36.12:490,36,0	1/1:5,11:15:45.11:567,45,0	1/1:2,1:3:9.03:125,9,0
chr10	90062932	.	A	AG	11484.65	PASS	AB=0.850;AC=53;AF=0.946;AN=56;BaseQRankSum=-0.259;DP=493;FS=1.323;HRun=1;HaplotypeScore=123.2017;InbreedingCoeff=-0.0611;MQ=43.36;MQ0=28;MQRankSum=4.707;QD=23.30;ReadPosRankSum=3.460;VQSLOD=5.0619;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:33.11:457,33,0	1/1:0,3:2:6.02:90,6,0	0/1:55,5:9:86.26:194,0,86	0/1:48,2:13:97.96:98,0,195	1/1:10,9:18:45.02:587,45,0	1/1:5,3:8:23.77:254,24,0	1/1:15,16:31:81:1002,81,0	1/1:14,1:15:25.22:331,25,0	1/1:13,2:14:38.35:396,38,0	1/1:12,12:23:65.90:830,66,0	1/1:8,4:12:29.98:337,30,0	1/1:15,1:16:41.76:491,42,0	1/1:15,1:16:47.24:472,47,0	1/1:8,4:12:36.09:460,36,0	1/1:3,15:17:42.14:620,42,0	1/1:15,3:16:44.71:531,45,0	1/1:1,11:11:27.09:400,27,0	1/1:9,10:18:34.97:464,35,0	0/1:5,5:10:8.77:273,0,9	1/1:3,4:7:21.07:290,21,0	1/1:11,12:23:41.99:485,42,0	1/1:7,8:15:44.96:535,45,0	1/1:4,3:7:21.01:225,21,0	1/1:11,8:18:31.90:335,32,0	1/1:12,1:13:23.62:244,24,0	1/1:13,0:13:35.93:426,36,0	1/1:11,4:14:44.71:539,45,0	1/1:1,2:3:9.03:116,9,0
chr10	90062941	.	AGAG	A	7369.80	PASS	AB=0.745;AC=37;AF=0.661;AN=56;BaseQRankSum=-0.557;DP=486;FS=39.378;HRun=0;HaplotypeScore=165.7706;InbreedingCoeff=0.4469;MQ=38.45;MQ0=37;MQRankSum=0.851;QD=21.80;ReadPosRankSum=4.876;VQSLOD=2.5508;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:11.97:0,12,69	0/0:3,0:2:5.98:0,6,68	0/0:57,0:7:18.94:0,19,265	0/0:47,0:11:11.35:0,11,222	1/1:12,8:18:38:423,38,0	0/1:5,4:9:0.93:175,0,1	1/1:13,14:27:63.16:836,63,0	0/1:4,7:10:5.91:207,0,6	1/1:9,8:16:30.68:367,31,0	1/1:13,9:20:18.93:685,19,0	1/1:6,7:12:19.24:214,19,0	1/1:4,12:16:14.61:375,15,0	1/1:10,8:18:16.71:436,17,0	1/1:8,8:15:31.11:386,31,0	0/0:11,0:10:24.08:0,24,385	1/1:9,8:15:38.21:442,38,0	0/0:14,0:11:21:0,21,307	0/1:10,7:16:20.86:322,0,21	0/1:7,3:9:73.15:199,0,73	1/1:4,2:6:18.03:223,18,0	1/1:15,9:23:14.13:334,14,0	1/1:12,5:17:29.86:325,30,0	1/1:5,4:8:6.01:79,6,0	0/1:15,5:19:4.12:234,0,4	1/1:11,1:12:18.06:255,18,0	0/1:10,4:14:25.63:306,0,26	1/1:8,9:16:23.77:437,24,0	0/1:5,1:6:39.07:110,0,39
chr10	90062946	.	AAGAGGAGGAGGAGGAGGAGGAGGAG	A	4945.30	PASS	AB=0.949;AC=23;AF=0.411;AN=56;BaseQRankSum=5.705;DP=460;FS=6.173;HRun=0;HaplotypeScore=300.9615;InbreedingCoeff=-0.3224;MQ=36.15;MQ0=36;MQRankSum=-2.123;QD=15.85;ReadPosRankSum=-1.586;VQSLOD=2.7328;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:20.56:0,21,127	0/0:2,0:1:3.01:0,3,45	0/0:53,0:7:17.33:0,17,262	0/0:45,0:10:24.03:0,24,408	0/1:15,1:14:22.84:164,0,23	0/1:8,0:9:19.30:224,0,19	0/1:31,0:31:19.01:19,0,183	0/0:9,0:8:15.57:0,16,98	0/1:15,2:16:51.68:649,0,52	0/1:21,0:18:40.07:97,0,40	0/1:12,0:11:5.95:6,0,23	0/1:19,1:20:86.78:262,0,87	0/1:16,4:20:45.29:883,0,45	0/1:19,0:18:30.36:113,0,30	0/0:10,0:9:24.08:0,24,518	0/1:14,2:15:99:376,0,175	0/0:12,0:9:21.07:0,21,351	0/1:15,1:15:39.91:338,0,40	0/1:10,0:9:33.65:63,0,34	0/0:6,0:6:7.97:0,8,29	1/1:22,0:21:2.21:72,2,0	1/1:12,1:13:0.99:252,1,0	0/1:8,0:7:1.57:10,0,2	0/1:15,2:16:87.08:204,0,87	1/1:7,2:9:1.27:368,1,0	0/1:13,0:13:20.24:174,0,20	0/1:14,2:16:55.15:455,0,55	0/1:6,0:6:4.81:217,0,5
chr10	90063880	.	G	GA	12701.64	PASS	AB=0.611;AC=45;AF=0.804;AN=56;BaseQRankSum=-8.632;DP=724;FS=2.322;HRun=10;HaplotypeScore=75.8392;InbreedingCoeff=0.9237;MQ=73.10;MQ0=0;MQRankSum=-3.338;QD=20.93;ReadPosRankSum=3.140;VQSLOD=5.8636;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:31:46.08:242,46,0	0/0:11,0:11:29.95:0,30,246	0/0:15,0:15:23.72:0,24,150	0/0:16,0:16:34.93:0,35,266	1/1:5,24:31:68.79:670,69,0	1/1:4,13:17:39.10:416,39,0	1/1:5,20:26:32.16:516,32,0	1/1:5,25:29:46.34:639,46,0	1/1:3,23:27:66:686,66,0	1/1:10,20:30:35.98:584,36,0	1/1:3,16:19:42.11:448,42,0	1/1:5,29:34:60.15:638,60,0	1/1:7,25:34:71.92:732,72,0	1/1:5,24:29:32.64:530,33,0	0/0:40,0:40:98.67:0,99,794	1/1:2,26:30:77.86:796,78,0	0/0:32,0:32:89.83:0,90,729	1/1:0,36:36:87.22:928,87,0	1/1:8,19:26:10.86:524,11,0	1/1:5,18:23:27.36:482,27,0	1/1:4,19:25:47.79:476,48,0	1/1:4,23:29:16.68:571,17,0	1/1:4,18:22:51.12:544,51,0	1/1:3,17:21:44.95:462,45,0	1/1:3,14:18:17.29:373,17,0	1/1:5,17:22:48.11:502,48,0	1/1:6,29:35:50.54:743,51,0	0/1:4,7:11:0.58:199,0,1
chr10	90065534	.	AGTGT	A	2238.22	PASS	AB=0.963;AC=32;AF=0.640;AN=50;BaseQRankSum=4.157;DP=651;FS=1.666;HRun=0;HaplotypeScore=133.3507;InbreedingCoeff=0.0472;MQ=58.28;MQ0=18;MQRankSum=2.231;QD=4.71;ReadPosRankSum=2.400;VQSLOD=2.6063;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,1:35:6.80:7,0,74	0/1:7,0:7:15.71:28,0,16	./.	./.	1/1:11,0:12:9.33:90,9,0	1/1:13,0:12:2.93:36,3,0	0/1:31,0:31:10.09:33,0,10	0/1:32,0:29:3.44:3,0,71	1/1:11,7:19:20.27:259,20,0	0/0:11,0:10:2.69:0,3,9	./.	1/1:21,3:23:32:334,32,0	1/1:16,2:18:8.01:212,8,0	0/1:18,3:23:20.44:99,0,20	1/1:22,0:32:11.67:94,12,0	1/1:21,5:27:32.62:415,33,0	0/1:25,0:27:13.30:119,0,13	0/1:22,1:23:7.60:74,0,8	1/1:24,0:20:6:52,6,0	0/1:13,0:12:21.27:21,0,26	0/0:66,0:64:5.90:0,6,40	0/1:17,0:17:5.44:5,0,8	1/1:9,0:9:2.99:34,3,0	1/1:26,20:45:14.96:234,15,0	1/1:10,0:10:12.02:165,12,0	0/1:32,0:30:51.87:78,0,52	0/0:14,0:14:5.90:0,6,39	0/0:7,0:7:5.99:0,6,48
chr10	90065575	.	GTGTA	G	1563.40	PASS	AB=0.970;AC=26;AF=0.464;AN=56;BaseQRankSum=3.256;DP=703;FS=0.422;HRun=0;HaplotypeScore=166.0626;InbreedingCoeff=-0.4480;MQ=44.31;MQ0=34;MQRankSum=-2.121;QD=2.69;ReadPosRankSum=3.872;VQSLOD=2.6188;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:44.48:0,44,378	0/1:9,0:10:42.17:42,0,91	0/0:42,0:9:13.23:0,13,157	0/1:57,0:12:11.61:12,0,114	0/1:13,0:13:46.59:47,0,49	1/1:11,3:13:6.39:79,6,0	0/1:29,1:29:9.37:69,0,9	0/1:48,0:46:84.41:84,0,469	0/1:21,1:22:99:145,0,159	0/0:21,0:21:5.07:0,5,254	0/0:9,0:9:11.95:0,12,92	0/1:26,0:25:96.95:150,0,97	0/1:17,0:17:58.04:127,0,58	0/1:28,0:28:18.94:19,0,184	0/1:26,0:26:15.41:15,0,197	0/1:27,0:26:99:161,0,120	0/1:20,0:21:66.33:66,0,191	0/0:15,0:15:10.47:0,10,166	0/1:27,0:22:50.42:50,0,328	0/1:14,2:16:25.13:95,0,25	1/1:61,0:58:8.31:59,8,0	0/1:19,0:19:21.11:21,0,134	0/1:13,0:10:11.77:12,0,76	0/1:47,0:46:81.37:81,0,238	0/1:15,0:14:50.12:52,0,50	0/1:26,2:27:72.50:311,0,72	0/1:7,2:9:0.10:0,0,0	1/1:6,0:5:2.99:24,3,0
chr10	90065577	.	GTA	G	560.32	PASS	AB=0.973;AC=20;AF=0.357;AN=56;BaseQRankSum=2.666;DP=704;FS=7.352;HRun=0;HaplotypeScore=154.8131;InbreedingCoeff=-0.2443;MQ=44.46;MQ0=33;MQRankSum=-3.240;QD=1.28;ReadPosRankSum=0.277;VQSLOD=2.0623;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:15.82:0,16,276	0/1:10,0:10:29.66:30,0,90	0/0:43,0:9:13.23:0,13,157	0/1:57,0:12:9.41:9,0,114	0/1:13,0:13:18.58:19,0,48	1/1:14,0:13:6.36:47,6,0	1/1:30,0:29:0.88:44,1,0	0/1:47,0:44:82.98:83,0,490	0/1:21,1:22:5.53:6,0,183	0/0:21,0:21:5.06:0,5,254	0/0:10,0:10:14.93:0,15,115	0/0:24,2:27:8.19:0,8,235	0/1:17,0:18:21.02:21,0,151	0/0:27,0:27:22.89:0,23,197	0/1:26,1:27:0.65:1,0,219	0/0:28,0:27:24.63:0,25,296	0/1:20,0:20:38.32:38,0,239	0/0:15,0:15:13.23:0,13,201	0/1:29,0:24:19.65:20,0,334	0/1:13,0:14:22.15:75,0,22	0/1:61,0:58:5.02:46,0,5	0/1:17,0:17:17.02:17,0,155	0/1:12,1:10:1.04:1,0,96	0/0:46,0:46:44.56:0,45,342	0/0:15,0:14:19.11:0,19,145	0/1:30,1:30:99:224,0,106	0/1:8,1:9:13.33:17,0,13	0/1:6,0:5:17.95:18,0,26
chr10	90065586	.	TGAGGGA	T	143.44	PASS	AB=0.971;AC=9;AF=0.161;AN=56;BaseQRankSum=5.411;DP=704;FS=2.458;HRun=0;HaplotypeScore=184.6027;InbreedingCoeff=-0.0096;MQ=44.63;MQ0=33;MQRankSum=-4.217;QD=0.76;ReadPosRankSum=-0.042;VQSLOD=2.3311;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:33:63.21:0,63,1451	0/0:9,0:9:6:0,6,352	0/0:45,0:10:27.05:0,27,582	0/1:59,0:14:3.62:4,0,568	0/0:11,0:11:27.01:0,27,686	0/1:12,4:15:12.14:12,0,33	0/1:26,0:25:19.68:20,0,136	0/0:47,0:43:78.04:0,78,1605	0/0:23,0:23:30.38:0,30,1267	0/0:25,0:24:36.66:0,37,1673	0/0:11,0:11:18.06:0,18,535	0/1:27,0:27:15.30:15,0,1509	0/0:19,0:18:12.24:0,12,1351	0/0:26,0:27:27.67:0,28,1187	0/0:25,0:24:45.99:0,46,1318	0/0:25,1:25:8.05:0,8,1422	0/0:20,0:20:6.20:0,6,1374	0/0:16,0:16:42.08:0,42,1085	0/0:32,0:27:64.80:0,65,925	0/1:16,0:16:87.95:88,0,330	0/0:53,1:51:35.50:0,36,256	0/0:16,0:15:34:0,34,974	0/0:13,0:12:27.98:0,28,846	0/0:47,0:47:81.06:0,81,2235	0/0:15,0:14:31.52:0,32,813	0/1:28,0:28:42.03:42,0,808	1/1:5,5:10:3.03:38,3,0	0/1:6,0:5:47.68:57,0,48
chr10	90065587	.	GA	G	1728.08	PASS	AB=0.793;AC=6;AF=0.107;AN=56;BaseQRankSum=1.395;DP=712;FS=1.088;HRun=1;HaplotypeScore=142.0445;InbreedingCoeff=-0.1490;MQ=44.78;MQ0=32;MQRankSum=-6.809;QD=10.80;ReadPosRankSum=-5.359;VQSLOD=-0.2750;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:62.29:0,62,952	0/0:8,1:9:23.93:0,24,281	0/0:45,0:10:23.16:0,23,366	0/0:60,0:14:39.52:0,40,554	0/0:11,0:11:27.04:0,27,377	0/0:15,1:15:5.62:0,6,73	0/0:26,0:25:1.11:0,1,67	0/1:15,31:43:99:996,0,395	0/0:22,1:23:47.79:0,48,701	0/1:21,4:24:83.99:84,0,766	0/1:11,1:12:1.83:2,0,218	0/0:28,0:28:59.64:0,60,873	0/0:21,0:20:51:0,51,720	0/0:27,0:27:45.21:0,45,627	0/0:26,0:25:48.02:0,48,700	0/0:26,1:26:60.34:0,60,870	0/0:20,0:20:56.29:0,56,777	0/0:17,0:17:45.11:0,45,658	0/1:12,21:28:99:624,0,252	0/1:14,2:16:37.24:37,0,198	0/0:37,17:51:1.16:0,1,90	0/0:15,1:15:29.84:0,30,470	0/0:13,0:12:27:0,27,407	0/0:46,1:47:72.23:0,72,1077	0/0:14,1:14:13.05:0,13,416	0/1:24,4:28:99:101,0,604	0/0:10,0:10:2.75:0,3,22	0/0:6,0:5:5.76:0,6,64
chr10	90065592	.	AGT	A	326.37	PASS	AB=0.876;AC=6;AF=0.107;AN=56;BaseQRankSum=2.125;DP=739;FS=3.650;HRun=0;HaplotypeScore=160.0315;InbreedingCoeff=-0.1204;MQ=45.48;MQ0=31;MQRankSum=2.087;QD=2.25;ReadPosRankSum=2.422;VQSLOD=2.3450;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,17:34:12.66:288,0,13	0/0:12,0:12:15.03:0,15,216	0/0:47,0:10:3.01:0,3,46	0/0:56,0:15:2.49:0,2,6	0/0:12,0:11:13.31:0,13,269	0/0:17,0:16:2.59:0,3,26	0/0:17,0:25:14.21:0,14,82	0/0:47,0:44:20.97:0,21,212	0/0:24,0:24:30.09:0,30,424	0/0:24,0:24:8.17:0,8,480	0/0:16,0:16:21.07:0,21,309	0/1:25,2:27:40.54:41,0,446	0/0:18,1:18:11.11:0,11,602	0/0:28,1:29:8.49:0,8,514	0/0:26,0:26:35.47:0,35,492	0/1:24,3:26:63.02:63,0,421	0/1:19,1:20:0.96:1,0,426	0/1:13,2:17:38.08:38,0,275	0/0:34,0:28:2.37:0,2,8	0/0:11,0:18:0.22:0,0,15	0/0:53,0:54:11.55:0,12,80	0/1:17,1:18:1.04:1,0,367	0/0:12,1:13:7.36:0,7,303	0/0:45,1:47:29.94:0,30,1002	0/0:15,0:15:0.26:0,0,236	0/0:20,0:31:34.39:0,34,311	0/0:11,0:12:2.70:0,3,18	0/0:7,0:6:2.99:0,3,23
chr10	90065905	.	A	AC	348.60	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.929;DP=577;FS=6.996;HRun=7;HaplotypeScore=76.7591;InbreedingCoeff=0.6451;MQ=80.09;MQ0=0;MQRankSum=0.149;QD=8.50;ReadPosRankSum=-0.924;VQSLOD=0.8949;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:22:36.11:435,36,0	0/0:7,0:7:21.03:0,21,203	0/0:31,0:29:33.42:0,33,428	0/1:19,0:18:19.21:19,0,118	0/0:11,0:11:30.04:0,30,284	0/0:27,0:27:75.10:0,75,716	0/0:8,0:8:21.02:0,21,197	0/0:33,0:33:72.10:0,72,693	0/0:20,0:20:57.09:0,57,550	0/0:17,0:17:47.28:0,47,433	0/0:13,0:13:24.02:0,24,226	0/0:26,0:26:66.07:0,66,628	0/0:25,0:25:66.10:0,66,636	0/0:20,0:20:57.09:0,57,549	0/0:29,0:29:78.12:0,78,752	0/0:28,0:28:72.11:0,72,695	0/0:26,0:26:66.10:0,66,637	0/0:23,0:23:60.06:0,60,571	0/0:24,0:24:57.08:0,57,549	0/0:20,0:20:54.08:0,54,517	0/0:14,0:14:36.05:0,36,347	0/0:17,0:17:48.08:0,48,460	0/0:14,0:14:38.93:0,39,362	0/0:19,0:19:45.07:0,45,434	0/0:27,0:26:72.10:0,72,693	0/0:23,0:23:59.19:0,59,577	0/0:21,0:21:60.10:0,60,578	0/0:13,0:13:30.03:0,30,284
chr10	90066392	.	T	TG	18717.29	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-5.084;DP=559;FS=10.857;HRun=2;HaplotypeScore=62.0425;InbreedingCoeff=0.9772;MQ=82.36;MQ0=0;MQRankSum=-7.043;QD=38.59;ReadPosRankSum=5.236;VQSLOD=4.6254;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:90.27:0,90,1103	1/1:1,8:9:27.04:365,27,0	0/0:19,0:19:54.16:0,54,649	0/0:20,0:20:54.04:0,54,624	1/1:1,24:25:72.24:1037,72,0	1/1:0,16:16:45.15:646,45,0	1/1:1,26:27:69.23:993,69,0	1/1:2,25:27:75.25:1080,75,0	1/1:0,21:21:57.19:820,57,0	1/1:1,13:14:39.13:562,39,0	1/1:1,10:11:30.10:432,30,0	1/1:1,22:23:66.22:950,66,0	1/1:0,23:23:60.20:864,60,0	1/1:1,21:22:60.20:863,60,0	1/1:1,21:22:60.20:864,60,0	1/1:1,13:14:39.13:562,39,0	1/1:0,34:34:96.32:1383,96,0	1/1:0,25:25:72.24:1037,72,0	1/1:2,10:12:30.10:431,30,0	1/1:1,7:8:21.07:302,21,0	1/1:1,36:37:99:1425,99,0	1/1:0,17:17:45.15:648,45,0	1/1:0,12:12:30.10:431,30,0	1/1:0,20:20:54.18:778,54,0	1/1:2,16:18:42.14:605,42,0	1/1:2,17:19:51.17:735,51,0	1/1:4,21:25:54.18:775,54,0	1/1:0,4:4:9.03:130,9,0
chr10	90067179	.	CT	C	4006.18	PASS	AB=0.629;AC=47;AF=0.839;AN=56;BaseQRankSum=0.308;DP=491;FS=29.473;HRun=15;HaplotypeScore=68.9328;InbreedingCoeff=0.1868;MQ=66.95;MQ0=5;MQRankSum=1.525;QD=8.49;ReadPosRankSum=5.077;VQSLOD=0.6103;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,19:29:6.60:209,0,7	0/1:3,8:12:0.69:115,0,1	0/0:9,0:6:3.83:0,4,32	0/0:9,0:7:2.80:0,3,14	1/1:4,20:24:34.31:217,34,0	1/1:6,19:25:26.79:300,27,0	1/1:6,9:16:28.55:179,29,0	1/1:15,14:30:30.84:185,31,0	1/1:5,6:11:8.82:58,9,0	1/1:9,16:25:8.01:183,8,0	1/1:5,16:21:37.34:244,37,0	1/1:1,8:9:17.71:115,18,0	1/1:2,12:16:30.58:185,31,0	1/1:11,9:22:21.51:127,22,0	1/1:3,13:18:4.11:123,4,0	1/1:9,16:25:7.45:182,7,0	1/1:3,17:21:41.25:265,41,0	1/1:1,14:15:29.54:192,30,0	0/1:11,6:17:12.13:59,0,12	1/1:5,8:13:25.63:160,26,0	1/1:4,6:10:14.19:85,14,0	1/1:4,5:9:4.68:36,5,0	0/1:3,5:8:14.51:46,0,15	1/1:7,9:15:23.61:154,24,0	1/1:10,7:17:8.71:57,9,0	0/1:6,8:15:9.76:66,0,10	1/1:9,15:25:34.38:217,34,0	1/1:4,16:18:38.36:250,38,0
chr10	90067981	.	C	CATGT	2811.75	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.352;DP=673;FS=0.647;HRun=0;HaplotypeScore=142.5875;InbreedingCoeff=0.9967;MQ=89.33;MQ0=0;MQRankSum=-5.027;QD=61.12;ReadPosRankSum=3.289;VQSLOD=5.1531;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,41:46:99:2907,111,0	0/0:8,0:8:24.08:0,24,436	0/0:30,0:30:87.30:0,87,1569	0/0:27,0:27:65.81:0,66,1167	0/0:23,0:23:66.22:0,66,1167	0/0:26,0:26:66.23:0,66,1215	0/0:17,0:17:51.14:0,51,876	0/0:24,0:24:63.19:0,63,1076	0/0:21,0:21:60.21:0,60,1104	0/0:22,0:22:51.17:0,51,911	0/0:18,0:18:48.16:0,48,883	0/0:25,0:25:72.23:0,72,1295	0/0:34,0:34:90.30:0,90,1610	0/0:29,0:29:87.26:0,87,1511	0/0:26,0:26:69.22:0,69,1238	0/0:24,0:24:69.24:0,69,1270	0/0:31,0:31:87.29:0,87,1565	0/0:26,0:26:72.23:0,72,1285	0/0:26,0:26:66.22:0,66,1178	0/0:12,0:12:33.11:0,33,607	0/0:42,0:42:99:0,120,2201	0/0:21,0:21:60.21:0,60,1104	0/0:19,0:19:54.19:0,54,993	0/0:20,0:20:48.16:0,48,883	0/0:11,0:11:30.10:0,30,546	0/0:31,0:31:72.25:0,72,1317	0/0:23,0:23:63.22:0,63,1159	0/0:11,0:11:30.10:0,30,552
chr10	90068146	.	GA	G	12041.40	PASS	AB=0.969;AC=52;AF=0.929;AN=56;BaseQRankSum=4.679;DP=558;FS=0.663;HRun=9;HaplotypeScore=98.8108;InbreedingCoeff=0.4998;MQ=79.63;MQ0=0;MQRankSum=-1.998;QD=22.55;ReadPosRankSum=2.643;VQSLOD=5.0966;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.20:0,72,822	1/1:1,8:9:24.01:219,24,0	0/1:14,0:15:5.99:6,0,148	0/1:14,1:15:22.05:22,0,121	1/1:1,17:18:48.02:439,48,0	1/1:1,19:20:51.03:467,51,0	1/1:2,20:22:57.03:522,57,0	1/1:1,19:20:57.03:521,57,0	1/1:4,23:27:63.50:577,64,0	1/1:1,16:18:51.01:461,51,0	1/1:0,5:5:11.96:110,12,0	1/1:1,23:24:69.04:631,69,0	1/1:1,16:17:48.03:439,48,0	1/1:1,28:29:75.04:686,75,0	1/1:1,21:22:57.03:521,57,0	1/1:1,15:16:42.49:385,42,0	1/1:2,30:32:87.04:796,87,0	1/1:0,19:19:48.03:439,48,0	1/1:3,15:18:45.02:412,45,0	1/1:1,15:16:45.02:411,45,0	1/1:5,48:53:99:1208,132,0	1/1:2,14:16:42.02:384,42,0	1/1:2,11:13:36.02:329,36,0	1/1:2,25:27:63.03:576,63,0	1/1:1,10:11:30.02:274,30,0	1/1:2,25:27:75.04:686,75,0	1/1:2,19:21:51.01:466,51,0	1/1:2,2:4:6:55,6,0
chr10	90068715	.	T	TTGTG	8054.62	PASS	AB=0.630;AC=19;AF=0.352;AN=54;BaseQRankSum=-12.899;DP=754;FS=5.243;HRun=0;HaplotypeScore=200.3003;InbreedingCoeff=0.9012;MQ=64.68;MQ0=0;MQRankSum=-3.591;QD=27.03;ReadPosRankSum=-3.421;VQSLOD=3.9412;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,37:62:80.75:1847,81,0	0/0:11,0:11:20.80:0,21,298	0/0:22,0:12:11.74:0,12,160	./.	0/0:19,0:21:51.13:0,51,762	1/1:12,13:25:33.11:806,33,0	1/1:16,7:25:14.67:272,15,0	1/1:12,11:25:42.84:796,43,0	0/0:24,0:25:43.40:0,43,899	0/0:18,0:18:42.09:0,42,637	0/0:11,0:11:27.07:0,27,418	0/0:27,0:29:75.22:0,75,1164	0/0:29,0:29:81.27:0,81,1306	0/0:28,0:30:81.26:0,81,1288	0/0:28,0:29:72.23:0,72,1125	0/0:27,0:27:63.21:0,63,1027	0/0:41,0:41:99:0,99,1624	0/0:37,0:38:90.30:0,90,1444	1/1:17,4:22:15.05:312,15,0	1/1:6,16:22:27.09:636,27,0	1/1:28,17:50:18.43:737,18,0	0/0:22,0:23:51.16:0,51,814	0/0:16,0:16:39.13:0,39,639	0/0:40,0:40:87.29:0,87,1425	0/0:24,0:27:67.82:0,68,1042	0/1:12,15:29:32.19:1156,0,32	1/1:9,19:30:55.17:1261,55,0	1/1:0,4:5:11.78:232,12,0
chr10	90070423	.	AT	A	783.72	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.463;DP=531;FS=1.426;HRun=9;HaplotypeScore=62.3910;InbreedingCoeff=0.8152;MQ=62.36;MQ0=2;MQRankSum=0.431;QD=21.77;ReadPosRankSum=1.519;VQSLOD=4.5500;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,32:36:96.04:878,96,0	0/0:8,0:8:21.06:0,21,242	0/0:8,0:5:6.01:0,6,65	0/0:5,0:3:6.02:0,6,69	0/0:21,0:21:57.17:0,57,657	0/0:28,0:28:81.23:0,81,926	0/0:15,0:15:39.12:0,39,450	0/0:33,0:32:84.15:0,84,909	0/0:16,0:16:45.13:0,45,519	0/0:27,0:27:69.20:0,69,790	0/0:20,0:20:54.15:0,54,615	0/0:20,0:20:54.14:0,54,603	0/0:24,0:24:63.17:0,63,709	0/0:17,0:17:25.27:0,25,478	0/0:22,0:22:54.03:0,54,587	0/0:23,0:23:66.20:0,66,762	0/0:33,0:33:87.24:0,87,993	0/0:18,0:18:45.13:0,45,515	0/0:26,0:26:69.20:0,69,796	0/0:9,0:9:21.05:0,21,232	0/0:11,0:11:33.10:0,33,381	0/0:9,0:9:21.06:0,21,242	0/0:17,0:17:51.15:0,51,588	0/0:17,0:17:39.10:0,39,439	0/0:19,0:19:54.16:0,54,623	0/0:24,0:24:66.18:0,66,744	0/0:15,0:15:39.12:0,39,450	0/0:10,0:10:27.08:0,27,312
chr10	90070861	.	T	TC	14827.84	PASS	AB=0.897;AC=33;AF=0.589;AN=56;BaseQRankSum=-11.488;DP=744;FS=2.762;HRun=4;HaplotypeScore=75.6489;InbreedingCoeff=0.9261;MQ=83.70;MQ0=0;MQRankSum=-2.338;QD=34.01;ReadPosRankSum=4.041;VQSLOD=5.4605;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,147,1667	1/1:1,11:12:30.10:410,30,0	0/0:26,0:26:60.17:0,60,676	0/0:25,0:25:60.09:0,60,660	1/1:2,25:27:72.19:958,72,0	0/0:21,0:21:51.14:0,51,578	0/0:35,0:35:99:0,102,1144	0/0:26,0:26:54.15:0,54,612	1/1:1,23:24:66.18:880,66,0	1/1:2,27:29:81.26:1092,81,0	1/1:0,22:22:42.14:573,42,0	1/1:2,22:24:63.21:862,63,0	1/1:0,25:25:72.24:983,72,0	1/1:4,31:35:93.31:1272,93,0	1/1:1,19:20:57.19:779,57,0	1/1:1,20:21:54.14:718,54,0	1/1:1,35:36:99:1395,102,0	1/1:1,34:35:99:1395,102,0	0/0:20,0:20:51.14:0,51,579	0/0:24,0:24:63.16:0,63,705	0/0:29,0:29:78.22:0,78,885	1/1:1,24:25:72.24:983,72,0	1/1:2,20:22:48.15:656,48,0	1/1:1,31:32:81.27:1105,81,0	1/1:1,20:21:54.14:717,54,0	0/1:23,3:26:47.93:48,0,673	0/0:33,0:33:96.27:0,96,1088	0/0:13,0:13:39.11:0,39,442
chr10	90072798	.	C	CA	9217.46	PASS	AB=1.000;AC=51;AF=0.944;AN=54;BaseQRankSum=-5.209;DP=267;FS=30.209;HRun=1;HaplotypeScore=42.6393;InbreedingCoeff=0.5562;MQ=71.25;MQ0=0;MQRankSum=-5.293;QD=36.43;ReadPosRankSum=2.820;VQSLOD=2.7504;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:36.12:574,36,0	1/1:0,5:5:12.04:192,12,0	0/0:9,0:9:25.29:0,25,239	0/1:9,0:9:10.30:10,0,199	1/1:0,9:9:24.08:383,24,0	1/1:0,13:13:30.10:478,30,0	1/1:0,12:12:30.10:479,30,0	1/1:0,8:8:24.08:384,24,0	1/1:0,8:8:18.06:289,18,0	1/1:0,5:5:15.05:240,15,0	1/1:0,6:6:15.52:240,16,0	1/1:0,13:13:36.12:575,36,0	1/1:0,6:6:18.06:286,18,0	1/1:0,15:15:36.12:572,36,0	1/1:0,12:12:23.52:381,24,0	1/1:0,18:18:42.13:670,42,0	1/1:0,6:6:12.04:191,12,0	1/1:0,7:7:9.03:144,9,0	1/1:0,9:9:27.08:401,27,0	1/1:1,8:9:17.49:286,17,0	1/1:0,13:13:30.10:479,30,0	./.	1/1:0,8:8:18.06:287,18,0	1/1:0,7:7:9.03:144,9,0	1/1:0,8:8:17.49:286,17,0	1/1:0,12:12:36.12:576,36,0	1/1:0,15:15:33.11:528,33,0	1/1:0,4:4:9.03:144,9,0
chr10	90074696	.	G	GA	10599.13	PASS	AB=1.000;AC=55;AF=0.982;AN=56;BaseQRankSum=-2.490;DP=509;FS=3.273;HRun=1;HaplotypeScore=137.2702;InbreedingCoeff=-0.0284;MQ=80.45;MQ0=0;MQRankSum=-3.581;QD=20.82;ReadPosRankSum=4.935;VQSLOD=5.2246;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,19:27:66.20:1024,66,0	1/1:6,0:6:15.82:121,16,0	1/1:25,0:25:61.43:393,61,0	0/1:14,0:14:48.91:142,0,49	1/1:21,0:21:55.09:465,55,0	1/1:12,0:12:32.78:251,33,0	1/1:19,0:19:47.36:354,47,0	1/1:29,0:29:73.77:525,74,0	1/1:21,0:21:58.46:465,58,0	1/1:26,0:26:74.37:561,74,0	1/1:13,0:13:32.81:276,33,0	1/1:17,0:17:50.87:422,51,0	1/1:19,0:19:51.70:418,52,0	1/1:12,0:12:32.86:270,33,0	1/1:24,0:24:48.56:498,49,0	1/1:19,0:19:56.60:429,57,0	1/1:23,0:23:34.75:391,35,0	1/1:12,0:12:30.21:220,30,0	1/1:22,0:22:56.79:413,57,0	1/1:19,0:19:53.81:448,54,0	1/1:18,0:17:41.85:342,42,0	1/1:18,0:18:19.97:329,20,0	1/1:23,0:23:62.76:507,63,0	1/1:18,0:17:15.01:282,15,0	1/1:8,0:8:1:150,1,0	1/1:14,0:14:14.80:272,15,0	1/1:21,0:20:56.71:442,57,0	1/1:8,0:8:23.92:188,24,0
chr10	90074724	.	G	GA	9710.46	PASS	AB=0.875;AC=54;AF=0.964;AN=56;BaseQRankSum=-2.963;DP=520;FS=15.268;HRun=1;HaplotypeScore=145.1735;InbreedingCoeff=-0.0378;MQ=71.70;MQ0=0;MQRankSum=-5.111;QD=18.67;ReadPosRankSum=4.185;VQSLOD=3.8253;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:27:57:520,57,0	1/1:7,0:7:20.99:196,21,0	0/1:12,6:18:55.06:133,0,55	0/1:17,0:17:92.88:111,0,93	1/1:24,0:24:23.94:198,24,0	1/1:12,0:12:30.01:278,30,0	1/1:19,0:19:41.90:347,42,0	1/1:31,0:31:92.49:718,92,0	1/1:17,0:17:38.99:355,39,0	1/1:28,0:28:77.64:640,78,0	1/1:15,0:15:20.96:175,21,0	1/1:17,0:17:39.03:371,39,0	1/1:21,0:21:51.01:473,51,0	1/1:10,0:10:24:218,24,0	1/1:20,0:20:39.04:373,39,0	1/1:18,0:18:42:384,42,0	1/1:23,0:23:48:436,48,0	1/1:14,0:14:35.92:296,36,0	1/1:23,0:23:68.58:532,69,0	1/1:21,0:21:35.96:313,36,0	1/1:20,0:19:26.95:228,27,0	1/1:17,0:17:35.99:327,36,0	1/1:19,0:19:30.06:303,30,0	1/1:20,0:19:29.94:251,30,0	1/1:10,0:10:23.96:207,24,0	1/1:17,0:17:50.91:440,51,0	1/1:25,0:24:72.03:681,72,0	1/1:9,0:9:23.97:210,24,0
chr10	90075075	.	T	TA	5655.25	PASS	AB=0.923;AC=27;AF=0.482;AN=56;BaseQRankSum=-11.732;DP=519;FS=1.160;HRun=9;HaplotypeScore=56.0754;InbreedingCoeff=0.8865;MQ=67.66;MQ0=0;MQRankSum=0.268;QD=24.27;ReadPosRankSum=0.747;VQSLOD=5.5988;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:34:50.92:0,51,150	0/0:0,0:14:29.36:0,29,93	0/1:11,1:9:16.77:28,0,17	0/0:5,0:4:2.48:0,2,9	1/1:5,19:25:57.02:609,57,0	0/0:24,0:24:62.98:0,63,547	0/0:18,0:18:38.94:0,39,330	0/0:25,0:25:68.95:0,69,592	1/1:0,23:23:57.15:631,57,0	1/1:5,23:28:69.16:746,69,0	1/1:0,14:14:39.06:413,39,0	1/1:2,22:24:60.16:664,60,0	1/1:1,14:15:35.96:381,36,0	1/1:3,14:17:39.11:431,39,0	0/0:2,0:19:34.63:0,35,102	1/1:2,10:13:32.92:346,33,0	0/0:2,0:27:44.77:0,45,132	1/1:1,13:14:36.10:395,36,0	0/0:12,0:12:23.99:0,24,208	0/0:19,0:19:46.98:0,47,389	0/0:6,0:6:15:0,15,130	1/1:1,7:8:21.06:231,21,0	1/1:4,10:14:15.33:249,15,0	1/1:0,6:6:6.02:66,6,0	1/1:2,18:20:42.11:465,42,0	0/0:31,1:32:53.80:0,54,693	0/0:30,0:30:71.96:0,72,621	0/0:21,0:21:62.99:0,63,547
chr10	90075520	.	T	TC	4205.74	PASS	AB=0.964;AC=20;AF=0.357;AN=56;BaseQRankSum=8.434;DP=480;FS=6.509;HRun=6;HaplotypeScore=60.2566;InbreedingCoeff=0.8668;MQ=74.58;MQ0=0;MQRankSum=0.275;QD=23.50;ReadPosRankSum=-1.777;VQSLOD=2.3823;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:96.10:0,96,964	0/0:6,0:6:12.03:0,12,122	0/0:15,0:16:31.78:0,32,282	0/1:12,0:11:2.41:2,0,134	0/0:15,0:15:30.06:0,30,305	1/1:0,10:10:27.09:340,27,0	1/1:6,33:39:53.66:988,54,0	1/1:6,7:13:15.05:188,15,0	0/0:8,0:8:21.05:0,21,214	0/1:12,1:13:10.70:11,0,209	0/0:11,0:11:30.05:0,30,299	0/0:23,0:23:35.53:0,36,524	0/0:20,0:20:60.13:0,60,609	0/0:13,0:13:36.08:0,36,366	0/0:17,0:17:51.12:0,51,520	0/0:20,0:20:57.13:0,57,581	0/0:34,0:34:96.21:0,96,978	0/0:19,0:19:48.11:0,48,490	1/1:3,11:14:33.09:398,33,0	1/1:3,12:15:24.03:279,24,0	1/1:1,23:24:57.18:717,57,0	0/0:8,0:8:18.03:0,18,182	0/0:9,0:9:27.06:0,27,275	0/0:27,0:27:78.17:0,78,795	0/0:13,0:13:33.07:0,33,336	1/1:2,15:17:45.14:566,45,0	1/1:0,15:15:39.12:491,39,0	1/1:0,7:7:18.06:226,18,0
chr10	90077008	.	AC	A	5074.37	PASS	AB=0.542;AC=17;AF=0.304;AN=56;BaseQRankSum=14.697;DP=588;FS=7.567;HRun=5;HaplotypeScore=73.5927;InbreedingCoeff=0.9161;MQ=69.67;MQ0=1;MQRankSum=1.880;QD=28.04;ReadPosRankSum=-4.544;VQSLOD=2.7934;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,117,1583	0/0:10,0:10:27.08:0,27,353	0/0:21,0:21:33.55:0,34,483	0/0:11,0:11:24.03:0,24,306	0/0:22,0:21:57.19:0,57,775	1/1:1,18:19:48.14:544,48,0	1/1:2,16:18:45.13:510,45,0	1/1:5,25:29:72.19:807,72,0	0/0:18,0:18:54.17:0,54,722	0/0:21,0:21:60.19:0,60,805	0/0:17,0:17:48.15:0,48,629	0/0:18,0:18:54.18:0,54,738	0/0:15,0:15:42.14:0,42,573	0/0:19,0:19:57.18:0,57,758	0/0:22,0:22:66.22:0,66,898	0/0:23,0:23:63.21:0,63,862	0/0:49,0:48:99:0,129,1728	0/0:21,0:21:60.20:0,60,820	1/1:0,22:22:66.19:748,66,0	1/1:2,8:10:21.06:238,21,0	1/1:2,25:27:57.16:646,57,0	0/0:12,0:12:33.11:0,33,451	0/0:17,0:17:45.14:0,45,599	0/0:23,0:23:54.18:0,54,737	0/0:21,0:21:54.18:0,54,738	0/1:4,22:26:12.69:645,0,13	1/1:3,21:24:72.07:766,72,0	1/1:0,5:5:15.04:170,15,0
chr10	90077078	.	TTTTTC	T	1093.30	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-6.707;DP=537;FS=10.389;HRun=0;HaplotypeScore=149.9120;InbreedingCoeff=0.2666;MQ=81.19;MQ0=8;MQRankSum=0.611;QD=17.63;ReadPosRankSum=0.360;VQSLOD=2.3905;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,25:31:60.21:1151,60,0	0/0:7,0:7:20.10:0,20,278	0/0:49,0:31:29.99:0,30,564	0/0:53,0:32:38.27:0,38,582	0/0:11,0:11:26.96:0,27,359	0/0:17,0:17:42.12:0,42,860	0/0:23,0:23:36.11:0,36,803	0/0:20,0:20:41.78:0,42,751	0/1:15,0:15:29.55:30,0,212	0/0:16,0:16:29.40:0,29,389	0/0:18,0:17:36.12:0,36,535	0/0:13,0:13:6.48:0,6,126	0/0:14,0:14:12.04:0,12,160	0/1:11,0:11:16.06:16,0,289	0/0:15,0:14:27.09:0,27,409	0/0:16,0:16:0.02:0,0,216	0/0:33,0:33:39.13:0,39,554	0/0:17,0:17:18.26:0,18,520	0/0:25,0:25:54.18:0,54,1185	0/0:20,0:19:51.18:0,51,1152	0/0:10,0:10:21.69:0,22,462	0/1:5,0:5:18.02:18,0,49	0/0:10,0:9:17.92:0,18,242	0/0:18,0:18:23.91:0,24,342	0/0:27,0:27:18.66:0,19,585	0/0:22,0:22:53.96:0,54,1114	0/0:17,0:17:39.07:0,39,791	0/0:4,0:4:12.04:0,12,267
chr10	90077088	.	C	CTT	4440.92	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=-3.853;DP=529;FS=0.879;HRun=4;HaplotypeScore=114.8977;InbreedingCoeff=0.8212;MQ=79.48;MQ0=8;MQRankSum=-3.813;QD=13.88;ReadPosRankSum=1.081;VQSLOD=1.3013;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:62.83:0,63,367	1/1:2,0:11:14.68:118,15,0	0/1:45,0:27:4.01:4,0,359	0/0:49,0:27:16.07:0,16,291	1/1:7,4:11:15.50:227,16,0	0/0:16,0:16:24.82:0,25,165	0/0:22,0:22:36:0,36,179	0/0:19,0:19:41.73:0,42,294	1/1:6,2:13:21.61:199,22,0	1/1:8,5:13:17.03:210,17,0	1/1:7,13:19:12.66:513,13,0	1/1:4,8:12:8.70:105,9,0	1/1:1,13:14:15.05:230,15,0	1/1:7,4:11:29.27:336,29,0	1/1:2,0:14:24.01:215,24,0	1/1:2,14:19:14.53:249,15,0	1/1:9,0:38:39.01:363,39,0	1/1:9,8:17:21.75:498,22,0	0/0:20,0:20:48.71:0,49,276	0/0:20,0:19:47.36:0,47,219	0/0:9,0:9:21.30:0,21,141	1/1:3,1:4:8.69:84,9,0	1/1:6,5:11:8.10:176,8,0	1/1:4,12:17:21.44:298,21,0	1/1:6,20:26:39.93:579,40,0	0/1:22,0:22:38.84:39,0,233	0/0:18,0:18:27.64:0,28,180	0/0:6,0:6:11.24:0,11,76
chr10	90077091	.	TTC	T	1393.48	PASS	AB=0.972;AC=25;AF=0.446;AN=56;BaseQRankSum=-1.148;DP=517;FS=1.369;HRun=0;HaplotypeScore=120.4631;InbreedingCoeff=-0.1060;MQ=77.95;MQ0=8;MQRankSum=2.257;QD=4.12;ReadPosRankSum=0.691;VQSLOD=2.9604;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:22.81:295,0,23	0/1:11,0:11:23.03:46,0,23	0/0:39,0:24:44.34:0,44,537	0/0:45,0:26:16.60:0,17,353	0/1:11,0:11:6.84:49,0,7	0/1:18,0:18:44.08:44,0,286	0/0:21,0:21:1.44:0,1,223	0/1:20,0:20:99:140,0,314	1/1:12,0:12:8.86:83,9,0	0/1:12,0:12:21.95:79,0,22	0/1:19,2:20:20.58:66,0,21	1/1:12,0:12:7.19:71,7,0	1/1:14,0:14:7.09:39,7,0	0/1:10,1:11:18.55:76,0,19	0/0:14,0:13:7.44:0,7,27	1/1:19,0:19:12.33:49,12,0	0/1:32,0:32:1.39:11,0,1	0/1:17,0:17:7.76:77,0,8	0/0:19,0:19:42.10:0,42,431	0/1:22,0:21:99:115,0,328	0/0:9,0:9:21.57:0,22,182	1/1:4,0:4:7.46:70,7,0	0/1:10,1:10:13.93:42,0,14	0/1:16,0:16:9.44:9,0,10	0/1:23,1:24:15.85:51,0,16	0/1:19,3:22:99:151,0,410	0/0:23,0:23:7.72:0,8,301	0/0:6,0:6:11.97:0,12,96
chr10	90077092	.	TC	T	2658.84	PASS	AB=0.972;AC=38;AF=0.679;AN=56;BaseQRankSum=-0.904;DP=523;FS=4.827;HRun=1;HaplotypeScore=109.8491;InbreedingCoeff=0.3501;MQ=77.03;MQ0=8;MQRankSum=-2.754;QD=6.68;ReadPosRankSum=0.487;VQSLOD=0.5917;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:54.89:177,0,55	0/1:10,1:11:3.77:73,0,4	0/0:38,0:24:22.22:0,22,431	0/0:43,1:24:17.95:0,18,255	1/1:11,0:11:21.94:149,22,0	0/1:19,0:19:48.32:48,0,145	0/1:18,1:19:10.99:11,0,116	0/1:20,0:20:54.72:55,0,203	1/1:12,0:12:28.82:182,29,0	1/1:12,0:12:25.97:172,26,0	1/1:21,0:20:26.30:202,26,0	1/1:10,1:11:14.69:105,15,0	1/1:14,0:14:14.56:87,15,0	1/1:12,0:12:29.38:185,29,0	1/1:14,0:13:23.73:106,24,0	1/1:18,1:19:23.46:147,23,0	1/1:33,0:33:37.65:209,38,0	1/1:18,0:18:38.02:246,38,0	0/1:19,1:20:44.31:44,0,194	0/1:24,0:23:18.70:19,0,160	0/0:9,0:9:20.08:0,20,112	1/1:4,0:4:11.72:86,12,0	1/1:10,1:10:16.52:94,17,0	1/1:17,0:17:23.81:144,24,0	1/1:24,0:24:42.86:247,43,0	0/1:21,1:22:62.36:62,0,241	0/0:24,0:24:21.08:0,21,196	0/0:8,0:8:11.23:0,11,61
chr10	90077093	.	C	CTTT	10308.71	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-6.892;DP=527;FS=1.247;HRun=8;HaplotypeScore=101.4094;InbreedingCoeff=0.8974;MQ=75.59;MQ0=8;MQRankSum=-2.949;QD=24.90;ReadPosRankSum=1.358;VQSLOD=2.9225;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:71.95:0,72,640	1/1:12,0:12:15.05:213,15,0	0/0:38,0:24:21.46:0,21,369	0/0:43,0:23:17.53:0,18,248	1/1:11,0:11:14.52:142,15,0	1/1:7,12:19:48.12:845,48,0	1/1:2,17:19:38.80:739,39,0	1/1:6,16:22:40.34:694,40,0	1/1:12,0:12:20.24:216,20,0	1/1:12,0:12:12.50:130,12,0	1/1:21,0:20:20.53:344,21,0	1/1:11,0:11:12.01:127,12,0	1/1:14,0:14:15.02:150,15,0	1/1:11,0:11:26.83:266,27,0	1/1:14,0:13:24.08:341,24,0	1/1:19,0:19:19.43:179,19,0	1/1:34,0:34:39.13:607,39,0	1/1:17,0:17:12.07:310,12,0	1/1:10,11:21:53.82:931,54,0	1/1:2,22:23:60.20:1144,60,0	1/1:2,7:9:18.06:364,18,0	1/1:4,0:4:9.01:94,9,0	1/1:11,0:10:16.20:204,16,0	1/1:17,0:17:23.78:224,24,0	1/1:24,0:24:38.99:382,39,0	1/1:12,10:22:51.16:892,51,0	1/1:4,19:23:30.01:590,30,0	1/1:1,7:11:9.03:182,9,0
chr10	90077314	.	A	ACC	533.36	PASS	AB=0.960;AC=11;AF=0.196;AN=56;BaseQRankSum=11.576;DP=482;FS=8.025;HRun=0;HaplotypeScore=115.9858;InbreedingCoeff=0.1774;MQ=58.78;MQ0=8;MQRankSum=-10.294;QD=4.44;ReadPosRankSum=3.410;VQSLOD=1.8603;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:99:0,103,1387	0/0:3,0:3:9.03:0,9,125	0/0:13,0:5:14.88:0,15,188	0/1:17,0:14:8.90:9,0,180	0/0:17,0:15:45.14:0,45,666	0/1:10,3:13:9.97:109,0,10	0/1:7,0:7:18.92:63,0,19	0/1:30,0:28:52.60:53,0,537	0/0:18,0:18:51.17:0,51,761	0/0:19,0:18:48.63:0,49,720	0/0:18,0:18:54.15:0,54,778	0/0:24,0:24:61.69:0,62,851	0/0:12,0:12:30.02:0,30,373	0/0:17,0:17:48.16:0,48,711	0/0:26,0:25:75.21:0,75,1059	0/0:14,0:14:37.67:0,38,549	0/0:44,0:43:99:0,117,1616	0/0:19,0:18:51.15:0,51,760	1/1:15,0:14:26.60:177,27,0	0/1:11,0:11:13.23:91,0,13	0/0:11,0:9:16.11:0,16,226	0/0:13,0:12:30.09:0,30,441	0/0:10,0:10:24.08:0,24,349	0/0:25,0:24:56:0,56,861	0/0:22,0:22:57.15:0,57,799	0/1:10,0:10:18.96:80,0,19	1/1:6,1:7:3.26:31,3,0	0/1:9,1:10:73.39:73,0,176
chr10	90077315	.	A	AGAAAAAAAAGAAG	7646.32	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=9.904;DP=519;FS=19.367;HRun=0;HaplotypeScore=201.0798;InbreedingCoeff=0.9411;MQ=60.56;MQ0=8;MQRankSum=-5.970;QD=50.64;ReadPosRankSum=0.133;VQSLOD=3.0003;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:97.18:0,97,2637	0/0:3,0:3:8.98:0,9,126	0/0:13,0:5:14.48:0,14,244	0/0:18,0:15:24.55:0,25,364	0/0:17,0:15:45.15:0,45,1362	1/1:1,0:16:21.07:953,21,0	1/1:2,0:21:2.82:147,3,0	1/1:25,0:24:48.09:1070,48,0	0/0:17,0:17:50.93:0,51,1042	0/0:20,0:19:47.20:0,47,1214	0/0:18,0:18:52.59:0,53,1193	0/0:23,0:23:57.90:0,58,1454	0/0:12,0:12:26.90:0,27,669	0/0:18,0:18:47.94:0,48,1088	0/0:26,0:25:74.44:0,74,1713	0/0:14,0:14:37.01:0,37,989	0/0:44,0:43:99:0,113,3070	0/0:19,0:18:54.17:0,54,1600	1/1:1,1:18:50.87:1562,51,0	1/1:0,0:12:14.98:611,15,0	1/1:11,0:9:15.05:517,15,0	0/0:12,0:11:27.04:0,27,760	0/0:9,0:9:24.08:0,24,489	0/0:25,0:24:56.67:0,57,1937	0/0:23,0:23:56.81:0,57,1381	1/1:1,1:20:11.28:1812,11,0	1/1:1,0:21:11.67:579,12,0	1/1:6,0:7:21.05:394,21,0
chr10	90077648	.	TC	T	9057.69	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=5.494;DP=494;FS=0.000;HRun=6;HaplotypeScore=55.4472;InbreedingCoeff=0.9458;MQ=80.16;MQ0=0;MQRankSum=-3.569;QD=23.96;ReadPosRankSum=2.823;VQSLOD=4.2614;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,1260	0/0:3,0:3:9.03:0,9,118	0/0:17,1:18:11.58:0,12,314	0/0:15,0:14:7.68:0,8,140	1/1:1,14:15:36.09:385,36,0	1/1:1,13:14:33.08:354,33,0	1/1:2,33:35:72.18:773,72,0	1/1:2,16:18:39.06:400,39,0	1/1:1,16:17:39.10:419,39,0	1/1:2,11:13:33.07:347,33,0	1/1:0,12:12:30.08:322,30,0	1/1:0,20:20:48.12:515,48,0	1/1:0,17:17:42.11:450,42,0	1/1:2,19:21:42.11:451,42,0	0/0:15,0:15:45.12:0,45,560	1/1:1,21:22:39.10:419,39,0	0/0:29,0:29:84.26:0,84,1088	1/1:2,18:20:48.12:516,48,0	1/1:3,18:21:45.98:475,46,0	1/1:1,11:12:18.04:187,18,0	1/1:4,25:29:69.17:740,69,0	1/1:3,11:14:32.15:341,32,0	1/1:1,10:11:8.11:239,8,0	1/1:1,14:15:36.09:387,36,0	1/1:0,15:15:27.07:290,27,0	1/1:2,14:16:42.10:450,42,0	1/1:2,13:15:42.06:438,42,0	1/1:0,6:6:15.04:161,15,0
chr10	90077855	.	AG	A	7639.36	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.041;DP=749;FS=0.300;HRun=2;HaplotypeScore=79.0691;InbreedingCoeff=0.9973;MQ=87.72;MQ0=0;MQRankSum=-2.633;QD=35.53;ReadPosRankSum=-0.643;VQSLOD=4.9231;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:70,0:70:99:0,208,3036	0/0:6,0:6:18.06:0,18,270	0/0:32,0:31:93.30:0,93,1344	0/0:28,0:28:44.41:0,44,931	0/0:28,0:28:78.26:0,78,1163	1/1:0,19:19:54.18:701,54,0	1/1:2,29:31:75.24:974,75,0	1/1:1,21:22:60.17:751,60,0	0/0:28,0:28:84.27:0,84,1240	0/0:37,0:37:99:0,105,1573	0/0:26,0:26:75.21:0,75,1098	0/0:29,0:29:87.28:0,87,1281	0/0:25,0:25:72.24:0,72,1071	0/0:34,0:34:99:0,99,1462	0/0:28,0:28:81.27:0,81,1214	0/0:32,0:32:93.32:0,93,1394	0/0:34,0:33:99:0,99,1462	0/0:22,0:22:66.21:0,66,969	1/1:1,10:11:30.10:390,30,0	1/1:0,22:22:63.20:818,63,0	1/1:0,55:55:99:2025,157,0	0/0:23,0:23:66.22:0,66,986	0/0:13,0:13:36.09:0,36,516	0/0:25,0:25:72.17:0,72,1031	0/0:14,0:14:36.07:0,36,495	1/1:1,25:26:33.28:929,33,0	1/1:1,22:23:63.20:818,63,0	1/1:0,6:6:18.06:234,18,0
chr10	90078166	.	AG	A	2837.04	PASS	AB=0.983;AC=32;AF=0.571;AN=56;BaseQRankSum=7.137;DP=504;FS=12.737;HRun=11;HaplotypeScore=96.8383;InbreedingCoeff=0.4968;MQ=75.57;MQ0=9;MQRankSum=-2.703;QD=10.47;ReadPosRankSum=3.395;VQSLOD=1.5712;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,14:29:66.44:505,66,0	1/1:1,2:3:5.99:49,6,0	0/0:67,2:30:16.56:0,17,126	0/0:50,0:21:7.32:0,7,151	0/1:14,0:14:13.69:76,0,14	0/0:20,0:20:26.61:0,27,222	0/0:13,0:13:1.41:0,1,132	0/0:19,1:19:15.82:0,16,182	1/1:12,0:12:23.67:177,24,0	1/1:15,0:15:9.75:110,10,0	1/1:10,0:10:0.02:62,0,0	1/1:16,1:18:34.86:239,35,0	1/1:9,0:11:23.67:166,24,0	1/1:13,0:14:29.52:214,30,0	0/0:18,0:18:29.54:0,30,250	1/1:20,1:22:47.66:362,48,0	0/1:21,0:21:40.88:41,0,146	1/1:21,0:20:50.75:396,51,0	0/1:8,1:9:43.43:43,0,66	0/1:5,0:5:0.02:0,0,0	0/1:14,0:14:28.39:28,0,71	1/1:15,0:16:23.23:141,23,0	1/1:8,0:8:11.80:86,12,0	1/1:20,1:22:36.31:296,36,0	0/1:6,0:6:1.99:35,0,2	0/0:20,0:21:2.94:0,3,32	0/0:16,0:17:32.07:0,32,269	0/0:4,0:4:9.01:0,9,84
chr10	90078176	.	G	GA	3206.93	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=7.166;DP=506;FS=3.257;HRun=0;HaplotypeScore=103.4841;InbreedingCoeff=0.8953;MQ=70.41;MQ0=8;MQRankSum=-1.913;QD=15.57;ReadPosRankSum=4.747;VQSLOD=5.6416;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:4.34:0,4,122	1/1:2,0:2:0.94:2,1,0	0/0:55,0:20:1.46:0,1,220	0/0:48,0:21:42.40:0,42,390	1/1:17,5:22:23.47:190,23,0	0/0:21,0:21:30.25:0,30,362	0/0:12,0:12:25.56:0,26,257	0/0:22,0:21:46.71:0,47,433	1/1:5,8:13:31.17:250,31,0	1/1:5,4:9:20.60:158,21,0	1/1:7,4:11:12.60:120,13,0	1/1:14,6:20:40.89:334,41,0	1/1:7,3:10:19.06:165,19,0	1/1:11,8:19:44.86:306,45,0	0/0:20,0:20:32.51:0,33,405	1/1:11,11:22:60.82:510,61,0	0/0:19,0:19:31.32:0,31,298	1/1:10,16:24:61.49:516,61,0	0/0:10,0:10:24.03:0,24,210	0/0:7,0:7:9.22:0,9,52	0/0:13,0:13:14.51:0,15,161	1/1:12,4:16:28.79:234,29,0	1/1:8,2:10:14.53:141,15,0	1/1:7,12:19:46.79:415,47,0	1/1:6,1:7:13.25:85,13,0	0/0:10,0:10:14.44:0,14,159	0/0:27,0:27:33.21:0,33,397	0/0:3,0:3:9.01:0,9,106
chr10	90078179	.	GA	G	7410.48	PASS	AB=0.531;AC=51;AF=0.911;AN=56;BaseQRankSum=-1.282;DP=518;FS=30.788;HRun=8;HaplotypeScore=83.8338;InbreedingCoeff=0.6686;MQ=69.50;MQ0=9;MQRankSum=-4.419;QD=17.56;ReadPosRankSum=2.871;VQSLOD=3.3736;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:33:81.12:774,81,0	1/1:0,2:2:6.01:58,6,0	0/0:49,0:17:21.61:0,22,235	0/0:45,1:20:12.42:0,12,338	1/1:5,14:22:38.28:367,38,0	1/1:8,16:24:18.01:174,18,0	1/1:1,11:12:24.04:232,24,0	1/1:7,17:24:33.17:332,33,0	1/1:3,4:14:38.95:358,39,0	1/1:0,0:9:20.82:184,21,0	1/1:2,8:13:20.97:190,21,0	1/1:1,11:20:42.05:395,42,0	1/1:1,5:11:29.95:272,30,0	1/1:1,10:19:45.05:426,45,0	1/1:3,17:20:30.05:289,30,0	1/1:1,10:23:60.07:566,60,0	0/1:2,15:17:3.94:231,0,4	1/1:2,10:25:63.09:597,63,0	1/1:1,9:10:27.04:258,27,0	1/1:1,10:11:5.98:57,6,0	1/1:2,11:13:18.03:174,18,0	1/1:3,9:16:30.02:278,30,0	1/1:0,9:11:11.91:112,12,0	1/1:2,4:19:42.06:397,42,0	1/1:1,5:7:17.61:171,18,0	1/1:1,9:10:21.02:201,21,0	1/1:3,27:30:29.95:289,30,0	1/1:2,2:4:3:29,3,0
chr10	90078832	.	C	CT	7749.54	PASS	AB=0.920;AC=35;AF=0.625;AN=56;BaseQRankSum=3.907;DP=503;FS=12.096;HRun=6;HaplotypeScore=59.5534;InbreedingCoeff=0.8998;MQ=64.84;MQ0=0;MQRankSum=-0.540;QD=23.34;ReadPosRankSum=3.193;VQSLOD=3.5164;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,36:41:78.25:981,78,0	1/1:0,7:7:21.07:261,21,0	0/0:8,0:7:11.99:0,12,106	0/0:5,0:4:6.43:0,6,48	1/1:2,18:20:45.02:522,45,0	0/0:26,0:26:78.18:0,78,793	0/0:20,0:20:48.06:0,48,465	0/0:32,0:32:87.16:0,87,868	1/1:2,10:13:27.08:329,27,0	1/1:0,20:20:48.13:576,48,0	1/1:1,10:10:24.08:297,24,0	1/1:0,17:17:39.12:490,39,0	1/1:6,20:26:42.13:528,42,0	1/1:1,23:24:51.16:636,51,0	1/1:6,18:24:39.12:491,39,0	1/1:2,16:18:33.11:415,33,0	1/1:3,22:25:54.16:679,54,0	1/1:3,28:30:60.19:755,60,0	0/0:20,0:20:42.08:0,42,428	0/0:7,0:7:21.05:0,21,214	0/0:18,0:18:36.04:0,36,350	1/1:2,8:10:19.54:235,20,0	1/1:0,5:5:11.98:130,12,0	1/1:2,10:12:21.07:264,21,0	1/1:0,5:5:12.04:151,12,0	0/1:21,2:23:9.33:9,0,542	0/0:29,0:29:87.19:0,87,879	0/0:6,0:6:18.04:0,18,184
chr10	90080563	.	T	TAA	12768.79	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-8.545;DP=601;FS=14.230;HRun=9;HaplotypeScore=73.8021;InbreedingCoeff=0.9861;MQ=55.28;MQ0=1;MQRankSum=2.972;QD=34.79;ReadPosRankSum=2.106;VQSLOD=3.8327;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,33:38:93.32:1431,93,0	1/1:1,3:4:12.04:179,12,0	0/0:12,0:11:26.06:0,26,260	0/0:9,0:8:8.83:0,9,94	1/1:3,23:27:66.13:924,66,0	0/0:20,0:21:48.10:0,48,566	0/0:11,0:11:30.07:0,30,319	0/0:43,0:43:99:0,102,1085	1/1:2,13:15:27.09:415,27,0	1/1:4,20:23:48.13:695,48,0	1/1:3,16:19:48.16:729,48,0	1/1:4,19:24:54.18:827,54,0	1/1:4,14:18:39.10:574,39,0	1/1:2,19:21:45.15:692,45,0	1/1:1,16:17:42.14:644,42,0	1/1:2,15:17:41.83:645,42,0	1/1:2,28:30:69.23:1062,69,0	1/1:4,33:36:84.29:1293,84,0	0/0:26,0:26:66.14:0,66,688	0/0:26,0:26:63.12:0,63,662	0/0:19,0:19:48.12:0,48,511	1/1:2,8:10:25.24:318,25,0	1/1:0,16:16:48.16:721,48,0	1/1:6,18:25:50.66:748,51,0	1/1:2,21:22:60.15:871,60,0	0/0:27,0:25:66.14:0,66,696	0/0:29,0:28:66.09:0,66,688	0/0:11,0:11:27.05:0,27,287
chr10	90080770	.	AAAAT	A	2764.67	PASS	AB=0.985;AC=33;AF=0.589;AN=56;BaseQRankSum=3.148;DP=585;FS=9.361;HRun=0;HaplotypeScore=158.4376;InbreedingCoeff=0.4825;MQ=58.95;MQ0=1;MQRankSum=-1.429;QD=6.66;ReadPosRankSum=0.507;VQSLOD=2.1201;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:5.47:0,5,371	0/0:14,0:14:37.83:0,38,264	0/0:9,0:8:21.07:0,21,388	0/0:4,0:3:8.92:0,9,164	1/1:24,0:24:48.76:264,49,0	0/0:19,0:19:10.63:0,11,29	0/1:21,0:21:3.05:28,0,3	0/1:22,0:21:11.72:39,0,12	1/1:23,1:24:46.14:273,46,0	1/1:30,0:30:67.67:399,68,0	1/1:18,0:18:34.59:183,35,0	1/1:26,1:27:43.17:259,43,0	1/1:19,1:20:43.24:258,43,0	1/1:16,0:16:23:119,23,0	0/1:21,0:21:12.82:13,0,204	1/1:21,1:22:40.40:245,40,0	0/0:38,0:38:49.10:0,49,278	1/1:23,0:23:23.48:153,23,0	0/1:19,0:19:9.55:10,0,26	0/1:24,0:24:6.18:6,0,15	0/1:15,2:17:5.84:88,0,6	1/1:10,0:10:20.13:104,20,0	1/1:23,0:23:40.38:224,40,0	1/1:19,0:19:37.16:194,37,0	1/1:10,0:10:17.20:89,17,0	0/1:25,0:25:10.15:10,0,55	0/0:31,0:31:8.27:0,8,51	0/0:20,0:20:2.30:0,2,21
chr10	90080771	.	AAAT	A	9819.12	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=-3.722;DP=587;FS=17.243;HRun=0;HaplotypeScore=125.7183;InbreedingCoeff=0.7343;MQ=60.12;MQ0=1;MQRankSum=-0.268;QD=18.88;ReadPosRankSum=3.223;VQSLOD=3.4156;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:21.43:108,0,21	0/0:14,0:14:13.24:0,13,77	0/0:10,0:9:24.04:0,24,336	0/0:5,0:4:8.51:0,9,131	1/1:6,19:25:55.02:767,55,0	1/1:19,0:19:35.73:155,36,0	1/1:19,3:22:30.99:231,31,0	1/1:22,0:21:45.14:257,45,0	1/1:1,23:24:48.16:707,48,0	1/1:1,27:28:72.67:988,73,0	1/1:4,14:18:39.05:538,39,0	1/1:3,24:27:51.07:701,51,0	1/1:1,19:20:48.04:676,48,0	1/1:1,15:16:24.08:363,24,0	0/1:21,0:21:7.92:81,0,8	1/1:1,20:21:42.14:622,42,0	0/0:38,0:38:11.29:0,11,34	1/1:5,18:23:31.51:497,32,0	1/1:18,1:19:41.40:207,41,0	1/1:24,0:24:39.49:172,39,0	1/1:17,0:17:27.96:150,28,0	1/1:3,7:10:21.07:317,21,0	1/1:4,19:23:42.13:614,42,0	1/1:0,19:19:39.13:590,39,0	1/1:0,10:10:21.03:291,21,0	1/1:26,0:26:40.20:292,40,0	1/1:31,0:31:60.42:273,60,0	1/1:19,1:20:44.18:223,44,0
chr10	90080772	.	AAT	A	10816.84	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.996;DP=579;FS=12.966;HRun=0;HaplotypeScore=112.4142;InbreedingCoeff=0.9290;MQ=61.06;MQ0=0;MQRankSum=-1.227;QD=19.18;ReadPosRankSum=1.150;VQSLOD=4.6085;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:70.40:463,70,0	1/1:14,0:14:17.41:151,17,0	0/0:10,0:10:20.08:0,20,282	0/0:5,0:4:5.96:0,6,97	1/1:25,0:25:59.81:470,60,0	1/1:0,19:19:39.13:534,39,0	1/1:4,18:22:33.05:399,33,0	1/1:12,11:22:51.13:629,51,0	1/1:24,0:24:47.86:373,48,0	1/1:28,0:28:72.34:588,72,0	1/1:17,0:17:38.84:297,39,0	1/1:27,0:27:50.79:391,51,0	1/1:20,0:20:47.77:369,48,0	1/1:16,0:16:23.94:188,24,0	1/1:21,0:21:56.17:360,56,0	1/1:21,0:21:41.86:326,42,0	1/1:38,0:38:39.30:206,39,0	1/1:22,0:22:28.51:252,29,0	1/1:8,11:19:51.30:594,51,0	1/1:1,21:22:45.50:554,46,0	1/1:2,14:16:30.05:372,30,0	1/1:9,0:9:20.94:164,21,0	1/1:22,0:22:41.85:325,42,0	1/1:19,0:19:39.38:306,39,0	1/1:10,0:10:20.91:160,21,0	1/1:7,17:24:63.18:810,63,0	1/1:3,28:31:71.73:898,72,0	1/1:1,19:20:48.14:639,48,0
chr10	90080773	.	AT	A	9185.90	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=0.491;DP=567;FS=19.457;HRun=1;HaplotypeScore=103.3791;InbreedingCoeff=0.6832;MQ=61.40;MQ0=0;MQRankSum=-1.563;QD=16.49;ReadPosRankSum=1.845;VQSLOD=3.8854;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,18:36:99:1085,99,0	1/1:5,9:14:36.25:474,36,0	0/0:10,0:10:19.56:0,20,232	0/1:5,0:4:9.38:9,0,67	1/1:23,0:23:58.99:381,59,0	1/1:19,0:19:38.68:267,39,0	1/1:21,0:21:32.61:217,33,0	1/1:22,1:22:50.73:386,51,0	1/1:24,0:24:46.95:278,47,0	1/1:27,0:27:71.80:475,72,0	1/1:14,1:15:38.21:233,38,0	1/1:25,1:26:49.97:301,50,0	1/1:20,0:20:46.86:276,47,0	1/1:15,1:16:23.54:141,24,0	1/1:10,11:21:61.13:660,61,0	1/1:21,0:21:41.12:245,41,0	1/1:1,37:38:51.12:679,51,0	1/1:18,1:19:32.34:194,32,0	1/1:17,2:19:50.59:378,51,0	1/1:21,1:22:45.48:308,45,0	1/1:16,0:16:29.61:196,30,0	1/1:8,0:8:20.56:123,21,0	1/1:20,2:22:41.04:247,41,0	1/1:19,0:19:38.72:230,39,0	1/1:10,0:10:20.55:124,21,0	1/1:23,0:23:64.64:466,65,0	1/1:28,2:30:71.32:487,71,0	1/1:20,0:20:47.53:325,48,0
chr10	90081315	.	G	GT	12105	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=17.187;DP=626;FS=0.677;HRun=1;HaplotypeScore=137.4272;InbreedingCoeff=0.9953;MQ=76.94;MQ0=0;MQRankSum=-4.358;QD=30.80;ReadPosRankSum=7.719;VQSLOD=4.0407;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,44:46:96.32:1433,96,0	1/1:2,14:16:27.09:402,27,0	0/0:25,0:23:62.91:0,63,791	0/0:26,0:25:54.51:0,55,599	1/1:4,24:28:58.64:778,59,0	0/0:20,0:20:60.17:0,60,783	0/0:24,0:24:72.22:0,72,968	0/0:26,0:26:75.20:0,75,958	1/1:2,19:21:48.15:630,48,0	1/1:1,24:25:72.17:919,72,0	1/1:2,15:17:35.24:474,35,0	1/1:0,21:21:42.14:555,42,0	1/1:0,19:19:51.16:670,51,0	1/1:1,25:26:63.20:823,63,0	1/1:0,29:29:69.17:1004,69,0	1/1:1,21:22:50.94:649,51,0	1/1:0,22:22:63.21:940,63,0	1/1:1,19:20:40.69:554,41,0	0/0:16,0:16:48.15:0,48,655	0/0:21,0:21:63.18:0,63,832	0/0:21,0:21:63.17:0,63,822	1/1:4,10:15:29.88:383,30,0	1/1:1,19:20:48.14:628,48,0	1/1:1,24:25:60.20:787,60,0	1/1:2,19:21:35.24:476,35,0	0/0:30,1:30:49.05:0,49,1175	0/0:19,0:19:54.17:0,54,736	0/0:4,0:4:12.03:0,12,151
chr10	90083256	.	AAAAAAAGAAAGAAAG	A	7020.32	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=11.155;DP=580;FS=3.830;HRun=0;HaplotypeScore=194.2462;InbreedingCoeff=0.8198;MQ=54.52;MQ0=14;MQRankSum=-7.923;QD=30.13;ReadPosRankSum=3.027;VQSLOD=4.1715;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:93.23:0,93,4356	0/0:7,0:7:21.07:0,21,1119	0/0:36,0:6:3.01:0,3,42	0/0:34,0:8:5.98:0,6,129	1/1:7,18:25:20.92:481,21,0	0/0:23,0:22:66.21:0,66,3493	0/0:19,0:19:51.14:0,51,2445	0/0:26,0:26:45.59:0,46,1329	1/1:4,16:20:9.03:375,9,0	1/1:6,16:22:42:1162,42,0	1/1:0,17:17:33.11:1176,33,0	1/1:5,11:16:15.05:626,15,0	1/1:3,11:14:3.01:125,3,0	1/1:9,14:23:18.06:751,18,0	0/0:24,0:24:60.21:0,60,2937	1/1:1,13:14:15.05:583,15,0	0/0:27,0:27:51.06:0,51,1956	0/1:15,0:15:10.62:352,0,11	0/0:20,0:20:36.08:0,36,1040	0/0:28,0:28:66.20:0,66,3214	0/0:16,0:16:33.11:0,33,1740	1/1:5,12:17:9.03:334,9,0	1/1:3,8:11:5.89:223,6,0	1/1:7,10:16:9.03:375,9,0	1/1:8,14:22:12.04:459,12,0	0/0:23,0:23:66.23:0,66,3309	0/0:19,0:19:54.16:0,54,2559	0/0:10,0:7:21.07:0,21,1062
chr10	90083269	.	AAG	A	982.53	PASS	AB=0.965;AC=19;AF=0.339;AN=56;BaseQRankSum=12.160;DP=550;FS=1.088;HRun=0;HaplotypeScore=103.2888;InbreedingCoeff=0.3662;MQ=49.51;MQ0=15;MQRankSum=-9.619;QD=5.01;ReadPosRankSum=3.829;VQSLOD=2.4305;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1830	0/0:11,0:11:33.11:0,33,573	0/0:36,0:4:9.03:0,9,155	0/0:36,0:11:21.94:0,22,285	0/1:19,1:20:51.30:94,0,51	0/0:23,0:22:69.22:0,69,1209	0/0:21,0:21:57.19:0,57,975	0/0:23,0:22:60.10:0,60,941	0/1:18,0:18:9.27:77,0,9	0/1:18,0:18:99:195,0,136	0/1:17,0:17:57:93,0,57	1/1:12,1:13:17.49:115,17,0	1/1:12,0:12:3.01:33,3,0	0/1:18,0:18:26.69:70,0,27	0/0:23,0:23:66.23:0,66,1169	1/1:14,0:14:14.70:120,15,0	0/0:24,0:24:66.05:0,66,998	0/1:10,2:11:99:103,0,275	0/0:17,0:16:45.07:0,45,670	0/0:25,0:25:75.23:0,75,1271	0/0:16,0:16:45.14:0,45,777	1/1:12,1:13:8.84:80,9,0	1/1:8,0:8:5.82:59,6,0	1/1:15,0:14:10.74:54,11,0	0/1:17,1:18:30.25:74,0,30	0/0:27,0:27:81.26:0,81,1362	0/0:22,0:22:63.18:0,63,1021	0/0:13,0:10:12.16:0,12,402
chr10	90083306	.	AAAGGAAGG	A	2975.68	PASS	AB=1.000;AC=17;AF=0.327;AN=52;BaseQRankSum=-11.593;DP=530;FS=6.021;HRun=0;HaplotypeScore=191.5555;InbreedingCoeff=0.1593;MQ=44.91;MQ0=13;MQRankSum=6.271;QD=12.40;ReadPosRankSum=7.970;VQSLOD=1.4876;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:9.68:10,0,252	1/1:8,0:8:0.02:2,0,0	./.	./.	0/0:34,0:32:29.92:0,30,336	0/1:28,0:25:99:287,0,189	1/1:21,0:20:2.81:204,3,0	1/1:11,6:16:17.96:174,18,0	0/0:15,0:15:4.43:0,4,120	0/0:19,0:19:5.90:0,6,45	0/0:25,0:25:23.36:0,23,212	0/0:22,0:21:12.36:0,12,132	0/0:18,0:18:22.88:0,23,213	0/0:15,0:15:16.12:0,16,170	0/0:24,0:23:16.93:0,17,219	0/0:18,0:17:16.45:0,16,165	0/0:15,0:13:7.26:0,7,120	1/1:7,0:6:1.99:37,2,0	0/1:13,0:9:44.73:202,0,45	0/1:31,0:31:99:299,0,401	0/1:16,0:16:99:392,0,147	0/0:18,0:18:10.68:0,11,62	0/0:12,0:12:5.61:0,6,89	0/0:15,0:13:2.58:0,3,71	0/0:20,0:19:21.99:0,22,191	0/1:30,0:30:99:889,0,220	0/1:26,0:26:99:324,0,170	1/1:11,0:11:11.25:312,11,0
chr10	90084451	.	CA	C	23929.03	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.524;DP=731;FS=0.512;HRun=2;HaplotypeScore=80.7737;InbreedingCoeff=0.9993;MQ=86.00;MQ0=0;MQRankSum=-12.295;QD=35.66;ReadPosRankSum=7.236;VQSLOD=4.4779;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,47:47:99:1518,117,0	1/1:0,9:9:27.09:350,27,0	0/0:35,0:34:99:0,99,1430	0/0:25,0:25:66.66:0,67,950	1/1:0,24:24:69.18:877,69,0	1/1:0,16:16:45.08:562,45,0	1/1:0,30:30:78.25:1012,78,0	1/1:1,33:34:96.29:1219,96,0	1/1:0,19:19:54.18:701,54,0	1/1:0,17:17:51.17:662,51,0	1/1:3,11:14:42.13:533,42,0	1/1:0,32:32:89.99:1167,90,0	1/1:1,33:34:96.31:1246,96,0	1/1:1,25:26:75.24:973,75,0	1/1:1,35:36:99:1285,99,0	1/1:0,32:32:87.28:1129,87,0	1/1:2,28:30:78.25:1012,78,0	1/1:0,22:22:63.20:817,63,0	1/1:1,21:22:63.19:803,63,0	1/1:0,26:26:75.19:950,75,0	1/1:0,34:34:84.27:1090,84,0	1/1:0,29:29:84.27:1091,84,0	1/1:2,21:23:66.21:847,66,0	1/1:0,24:24:66.21:856,66,0	1/1:1,20:21:54.18:701,54,0	1/1:2,23:25:69.22:893,69,0	1/1:1,32:33:93.30:1207,93,0	1/1:1,11:12:33.11:428,33,0
chr10	90084527	.	GGTGTGTGTGTGTGT	G	11842.76	PASS	AB=0.594;AC=17;AF=0.304;AN=56;BaseQRankSum=-0.582;DP=708;FS=6.489;HRun=0;HaplotypeScore=303.1805;InbreedingCoeff=0.8726;MQ=56.78;MQ0=23;MQRankSum=-6.647;QD=63.33;ReadPosRankSum=6.444;VQSLOD=2.9821;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:41:42.61:0,43,1989	0/0:10,0:10:15.02:0,15,575	0/0:43,0:17:30.06:0,30,923	0/0:42,0:21:33.58:0,34,1057	0/0:14,0:23:17.81:0,18,881	1/1:6,15:22:51.17:1990,51,0	1/1:11,24:35:51.17:2016,51,0	1/1:14,19:33:54.13:1466,54,0	0/0:8,0:12:8.36:0,8,548	0/0:22,0:29:72.25:0,72,4002	0/0:13,0:24:30.57:0,31,1649	0/0:20,0:29:33.09:0,33,1538	0/0:17,0:24:39.13:0,39,1824	0/0:16,0:20:18.95:0,19,683	0/0:25,0:36:51.17:0,51,2367	0/0:14,0:29:51.17:0,51,2940	0/0:16,0:27:33.10:0,33,1572	0/0:16,0:21:48.12:0,48,2486	1/1:11,9:19:30.10:1138,30,0	1/1:7,8:15:27.09:1092,27,0	1/1:11,5:17:18.06:675,18,0	0/0:17,0:23:19.95:0,20,1085	0/0:14,0:27:15.03:0,15,739	0/0:18,0:24:24.55:0,25,1232	0/0:15,0:18:12.02:0,12,340	0/1:6,13:19:99:1535,0,157	1/1:6,13:19:42.14:1687,42,0	1/1:5,2:7:6.02:243,6,0
chr10	90084540	.	GT	G	1444.41	PASS	AB=0.850;AC=17;AF=0.304;AN=56;BaseQRankSum=9.336;DP=655;FS=5.965;HRun=1;HaplotypeScore=205.7181;InbreedingCoeff=0.9079;MQ=49.99;MQ0=30;MQRankSum=-8.454;QD=10.70;ReadPosRankSum=6.880;VQSLOD=1.9141;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:40:61.21:0,61,680	0/0:9,0:9:17.77:0,18,230	0/0:51,0:15:42.02:0,42,483	0/0:41,0:15:42.08:0,42,498	0/0:31,0:27:35.78:0,36,433	1/1:17,0:17:40.79:149,41,0	1/1:24,0:24:43.51:290,44,0	1/1:20,0:19:50.92:495,51,0	0/0:13,0:12:18.01:0,18,216	0/0:29,0:29:81.27:0,81,1199	0/0:27,0:27:41.72:0,42,535	0/0:29,0:27:42.07:0,42,485	0/0:22,0:22:45.13:0,45,585	0/0:22,0:20:27.55:0,28,340	0/0:37,0:36:63.16:0,63,750	0/0:28,0:27:55.93:0,56,703	0/0:22,0:22:32.08:0,32,351	0/0:24,0:22:60.11:0,60,771	1/1:13,0:12:30.96:185,31,0	1/1:10,2:10:21.34:70,21,0	1/1:11,1:11:15.14:83,15,0	0/0:19,0:19:30.28:0,30,389	0/0:27,0:27:27.05:0,27,312	0/0:27,0:25:27.01:0,27,375	0/0:19,0:18:22.60:0,23,267	0/1:14,3:16:8.01:142,0,8	1/1:15,2:16:36.85:181,37,0	1/1:3,0:3:7.75:54,8,0
chr10	90087287	.	T	TTC	5802.12	PASS	AB=0.972;AC=48;AF=0.857;AN=56;BaseQRankSum=-3.790;DP=555;FS=56.227;HRun=0;HaplotypeScore=154.8730;InbreedingCoeff=0.4060;MQ=52.51;MQ0=11;MQRankSum=-0.471;QD=11.03;ReadPosRankSum=2.126;VQSLOD=2.5077;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:21:35.59:36,0,67	1/1:3,0:3:8.63:45,9,0	0/0:15,0:7:13.79:0,14,141	0/0:14,0:12:12.66:0,13,140	0/1:20,1:21:11.88:173,0,12	1/1:11,0:10:14.42:115,14,0	1/1:19,1:20:48.43:324,48,0	1/1:35,1:32:30.37:468,30,0	1/1:20,0:18:32.76:225,33,0	1/1:26,0:25:37.45:307,37,0	1/1:12,0:12:17.72:127,18,0	1/1:23,0:22:43.70:301,44,0	1/1:14,0:13:24.88:132,25,0	1/1:21,0:19:12.99:151,13,0	1/1:31,0:30:61.83:461,62,0	1/1:26,0:26:62.96:384,63,0	1/1:18,0:17:17.67:167,18,0	1/1:27,1:27:18.15:187,18,0	1/1:26,2:24:54:398,54,0	0/1:13,1:14:3.27:123,0,3	1/1:9,3:11:17.31:151,17,0	1/1:16,0:16:27.15:231,27,0	1/1:24,0:22:33.93:231,34,0	1/1:17,0:16:27.67:174,28,0	1/1:20,0:19:48.45:269,48,0	0/1:29,0:28:78.12:197,0,78	1/1:20,0:20:52.65:278,53,0	1/1:10,0:10:26:147,26,0
chr10	90087288	.	T	TC	10877.68	PASS	AB=0.806;AC=49;AF=0.875;AN=56;BaseQRankSum=-4.350;DP=561;FS=66.867;HRun=0;HaplotypeScore=130.4189;InbreedingCoeff=0.4343;MQ=49.54;MQ0=11;MQRankSum=0.003;QD=20.37;ReadPosRankSum=0.604;VQSLOD=1.1677;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,1:22:19.09:64,0,19	1/1:1,3:4:9:110,9,0	0/0:15,0:7:14.05:0,14,146	0/0:12,0:10:7.21:0,7,109	1/1:12,9:21:6.66:341,7,0	1/1:8,4:11:14.85:201,15,0	1/1:10,9:19:52.80:503,53,0	1/1:15,22:33:49.24:873,49,0	1/1:9,11:18:40.29:470,40,0	1/1:11,15:25:62.59:687,63,0	1/1:6,6:12:29.25:255,29,0	1/1:10,13:22:50.61:565,51,0	1/1:6,8:13:26.92:296,27,0	1/1:12,6:16:10.78:277,11,0	1/1:15,16:30:73.37:734,73,0	1/1:8,18:26:64.63:782,65,0	1/1:17,3:19:19.64:261,20,0	1/1:5,23:27:15.02:410,15,0	1/1:6,20:24:56.63:528,57,0	0/1:10,5:15:8.16:215,0,8	1/1:6,6:11:17.71:180,18,0	1/1:7,8:15:33.30:383,33,0	1/1:11,15:24:45.91:549,46,0	1/1:8,10:17:28.28:347,28,0	1/1:7,12:18:50.96:542,51,0	0/1:18,13:30:42.62:430,0,43	1/1:7,14:21:51.89:560,52,0	1/1:4,7:11:27.04:311,27,0
chr10	90087531	.	C	CT	9090.48	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-4.256;DP=601;FS=0.000;HRun=6;HaplotypeScore=111.2752;InbreedingCoeff=0.9994;MQ=70.83;MQ0=0;MQRankSum=-2.120;QD=32.47;ReadPosRankSum=0.262;VQSLOD=3.5477;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1154	1/1:0,10:10:27.09:340,27,0	0/0:18,0:17:41.93:0,42,399	0/0:10,0:10:23.51:0,24,209	0/0:18,0:18:42.10:0,42,428	1/1:1,19:20:57.18:717,57,0	1/1:3,25:28:63.20:792,63,0	1/1:4,30:34:90.29:1132,90,0	0/0:19,0:19:51.08:0,51,506	0/0:24,0:24:54.12:0,54,551	0/0:17,0:17:42.09:0,42,429	0/0:25,0:25:72.15:0,72,728	0/0:18,0:18:48.10:0,48,489	0/0:20,0:20:57.13:0,57,581	1/1:2,21:23:57.18:717,57,0	0/0:26,0:26:69.15:0,69,704	1/1:3,29:31:78.25:981,78,0	0/0:20,0:20:51.11:0,51,520	1/1:2,11:13:33.09:401,33,0	1/1:2,18:20:50.90:641,51,0	1/1:3,15:18:48.14:590,48,0	0/0:11,0:11:33.07:0,33,336	0/0:18,0:18:45.09:0,45,459	0/0:21,0:21:63.14:0,63,643	0/0:16,0:16:45.10:0,45,459	1/1:1,29:29:81.25:1006,81,0	1/1:1,29:30:84.27:1056,84,0	1/1:2,20:22:57.18:716,57,0
chr10	90090905	.	C	CTTGT	19048.89	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-1.886;DP=771;FS=2.938;HRun=0;HaplotypeScore=121.5766;InbreedingCoeff=0.8617;MQ=55.95;MQ0=3;MQRankSum=-1.614;QD=27.33;ReadPosRankSum=1.041;VQSLOD=4.4226;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,102,1558	1/1:5,0:13:6.02:105,6,0	0/0:16,0:10:11.99:0,12,104	0/0:12,0:9:9.01:0,9,102	1/1:7,19:26:57.02:1179,57,0	1/1:9,1:32:36.07:594,36,0	1/1:12,0:29:12.04:209,12,0	1/1:45,0:45:53.75:507,54,0	1/1:8,15:23:36.12:861,36,0	1/1:11,25:36:46.55:1550,47,0	1/1:8,16:24:42.14:963,42,0	1/1:9,25:34:57.20:1364,57,0	1/1:12,22:34:59.68:1428,60,0	1/1:10,12:23:30.08:670,30,0	1/1:6,1:33:27.09:471,27,0	1/1:4,31:35:75.09:1785,75,0	1/1:10,1:22:9.02:130,9,0	1/1:7,15:24:42.14:1003,42,0	1/1:24,1:36:42.65:529,43,0	1/1:8,0:22:26.96:404,27,0	1/1:12,0:22:15.05:259,15,0	1/1:2,17:20:45.09:980,45,0	1/1:6,20:27:39.61:926,40,0	1/1:6,10:16:21.07:486,21,0	1/1:8,1:19:6.02:105,6,0	1/1:13,3:44:93.18:1440,93,0	1/1:14,0:41:41.11:684,41,0	1/1:2,0:13:24.08:419,24,0
chr10	90093436	.	G	GAGA	41102.74	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.756;DP=795;FS=8.225;HRun=0;HaplotypeScore=105.0928;InbreedingCoeff=0.9912;MQ=86.33;MQ0=0;MQRankSum=-12.068;QD=55.92;ReadPosRankSum=5.782;VQSLOD=6.4689;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,45:48:99:2456,111,0	1/1:0,9:9:27.06:574,27,0	0/0:35,0:35:73.28:0,73,1342	0/0:25,0:25:69.68:0,70,1116	1/1:0,14:14:32.97:611,33,0	1/1:1,15:16:45.02:889,45,0	1/1:0,27:31:66.14:1421,66,0	1/1:2,48:50:99:3315,150,0	1/1:0,30:30:72.16:1560,72,0	1/1:2,21:24:66.19:1364,66,0	1/1:1,23:25:69.11:1442,69,0	1/1:6,40:50:99:2438,108,0	1/1:1,24:26:66.15:1507,66,0	1/1:2,19:22:60.21:1382,60,0	1/1:1,29:31:84.20:1836,84,0	1/1:3,29:33:81.26:1867,81,0	1/1:3,45:48:99:2628,114,0	1/1:3,23:27:66.16:1425,66,0	1/1:3,25:28:84.26:1795,84,0	1/1:1,18:19:54.14:1182,54,0	1/1:0,37:38:93.21:1984,93,0	1/1:2,29:31:81.05:1618,81,0	1/1:1,17:18:48.16:1104,48,0	1/1:2,32:34:69.20:1589,69,0	1/1:1,18:19:54.10:1145,54,0	1/1:2,24:26:75.26:1691,75,0	1/1:0,32:32:84.29:1933,84,0	1/1:0,6:6:15.05:346,15,0
chr10	90094100	.	A	AAC	15206.33	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-9.736;DP=763;FS=1.936;HRun=0;HaplotypeScore=113.6551;InbreedingCoeff=0.9989;MQ=85.36;MQ0=1;MQRankSum=-2.275;QD=46.22;ReadPosRankSum=2.241;VQSLOD=5.9505;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,1594	1/1:0,8:9:24.08:449,24,0	0/0:22,0:22:63.09:0,63,819	0/0:29,0:29:78.21:0,78,1092	0/0:31,0:31:84.26:0,84,1192	1/1:0,23:23:54.19:1011,54,0	1/1:1,28:30:69.24:1290,69,0	1/1:6,38:44:99:2124,120,0	0/0:26,0:26:75.22:0,75,1063	0/0:26,0:26:72.24:0,72,1044	0/0:18,0:18:51.17:0,51,733	0/0:33,0:33:93.31:0,93,1368	0/0:29,0:29:87.28:0,87,1259	0/0:16,0:16:45.11:0,45,638	1/1:2,32:35:90.31:1685,90,0	0/0:25,0:25:75.24:0,75,1085	1/1:3,24:26:69.23:1264,69,0	0/0:37,0:37:99:0,108,1563	1/1:3,20:23:60.18:1090,60,0	1/1:8,27:36:87.30:1607,87,0	1/1:1,39:40:99:1910,102,0	0/0:25,0:25:72.20:0,72,1020	0/0:16,0:16:48.15:0,48,689	0/0:40,0:40:99:0,102,1435	0/0:20,0:20:57.19:0,57,837	1/1:2,21:22:19.42:1036,19,0	1/1:0,19:19:42.08:786,42,0	1/1:1,18:19:51.17:955,51,0
chr10	90094940	.	GT	G	6361.87	PASS	AB=1.000;AC=52;AF=0.929;AN=56;BaseQRankSum=3.173;DP=591;FS=8.891;HRun=3;HaplotypeScore=153.7534;InbreedingCoeff=-0.0766;MQ=79.50;MQ0=0;MQRankSum=0.646;QD=10.76;ReadPosRankSum=6.946;VQSLOD=2.1585;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:43,1:44:47.52:525,48,0	1/1:8,0:8:19.74:101,20,0	0/1:23,0:23:4.19:123,0,4	0/1:15,0:15:53.90:63,0,54	1/1:12,1:13:31.01:195,31,0	1/1:18,0:18:15.84:174,16,0	0/1:30,0:30:43.34:198,0,43	1/1:24,0:24:56.19:247,56,0	1/1:16,1:17:42.81:262,43,0	1/1:17,1:18:50.49:304,50,0	1/1:9,0:9:21.80:104,22,0	1/1:31,0:31:58.98:404,59,0	1/1:17,0:17:42.37:238,42,0	1/1:18,0:18:39.57:212,40,0	1/1:20,0:20:43.90:224,44,0	1/1:27,0:27:61.96:357,62,0	1/1:33,0:33:60.71:402,61,0	1/1:31,0:31:56.35:341,56,0	1/1:16,0:16:36.74:158,37,0	1/1:13,1:14:12.20:171,12,0	0/1:44,0:44:10.02:298,0,10	1/1:14,0:14:16.28:159,16,0	1/1:15,0:15:7.88:100,8,0	1/1:27,0:27:33.66:250,34,0	1/1:24,0:24:55.15:270,55,0	1/1:18,0:18:20.70:208,21,0	1/1:17,0:17:23.50:221,24,0	1/1:6,0:6:11:52,11,0
chr10	90096798	.	GGTGTGT	G	4158.77	PASS	AB=0.838;AC=24;AF=0.462;AN=52;BaseQRankSum=-1.028;DP=797;FS=1.184;HRun=0;HaplotypeScore=205.7785;InbreedingCoeff=0.7869;MQ=55.19;MQ0=21;MQRankSum=-7.905;QD=10.53;ReadPosRankSum=0.733;VQSLOD=2.7203;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:37:6.02:0,6,114	0/0:9,0:13:12.04:0,12,314	./.	./.	1/1:17,10:29:2.89:20,3,0	0/0:11,0:20:12.04:0,12,262	0/0:22,0:34:27.09:0,27,754	0/0:39,0:38:31.64:0,32,607	1/1:16,11:29:24.52:473,25,0	1/1:24,8:34:30.55:513,31,0	0/0:5,7:12:0:0,0,0	1/1:20,21:41:20:711,20,0	1/1:17,26:44:39.13:801,39,0	1/1:17,12:29:23.90:451,24,0	0/0:19,0:37:39.94:0,40,922	1/1:17,22:41:27.98:535,28,0	0/0:16,0:26:36.72:0,37,788	1/1:6,4:11:6.02:104,6,0	0/0:15,0:16:21.05:0,21,426	0/0:21,0:21:9.03:0,9,191	0/0:46,0:61:30.09:0,30,672	0/1:14,12:27:0.53:1,0,1	1/1:10,9:19:11.86:193,12,0	1/1:15,17:32:11.97:233,12,0	1/1:11,11:23:6.02:123,6,0	0/1:23,0:32:2.21:2,0,1105	0/0:9,0:19:33.11:0,33,747	0/0:9,0:10:9.48:0,9,183
chr10	90097556	.	TTTA	T	919.94	PASS	AB=0.993;AC=25;AF=0.446;AN=56;BaseQRankSum=0.668;DP=480;FS=17.350;HRun=0;HaplotypeScore=72.3078;InbreedingCoeff=0.4437;MQ=44.54;MQ0=40;MQRankSum=-0.257;QD=3.69;ReadPosRankSum=3.515;VQSLOD=-0.1416;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:23:0.13:0,0,110	0/0:8,0:8:14.14:0,14,106	0/0:6,0:4:9.88:0,10,83	0/0:5,0:2:6:0,6,56	1/1:27,1:26:29.63:164,30,0	0/0:28,0:27:16.66:0,17,379	0/0:9,0:7:0.09:0,0,91	0/1:30,0:26:13.04:13,0,347	1/1:9,1:8:13.64:84,14,0	1/1:20,1:20:7.03:68,7,0	1/1:20,0:19:16.99:68,17,0	1/1:10,0:7:10.26:53,10,0	1/1:7,1:8:13.28:121,13,0	1/1:12,0:12:15.66:61,16,0	0/0:18,0:17:24.52:0,25,281	0/1:16,0:15:14.53:75,0,15	0/0:36,0:32:15.08:0,15,294	0/1:25,1:22:5.05:130,0,5	0/0:22,0:18:4:0,4,274	0/0:15,0:15:30.42:0,30,211	0/0:14,0:13:27.85:0,28,252	1/1:4,0:3:5.54:27,6,0	0/1:12,0:12:16.02:64,0,16	1/1:19,1:18:3.19:92,3,0	1/1:15,1:15:10.55:55,11,0	0/1:16,0:14:32:32,0,125	0/0:25,0:22:1.26:0,1,314	0/0:18,0:12:20.13:0,20,110
chr10	90097557	.	TTA	T	3048.99	PASS	AB=0.996;AC=38;AF=0.679;AN=56;BaseQRankSum=-6.155;DP=463;FS=36.992;HRun=0;HaplotypeScore=55.8473;InbreedingCoeff=0.0698;MQ=42.58;MQ0=45;MQRankSum=0.845;QD=6.93;ReadPosRankSum=2.069;VQSLOD=1.5121;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:22:1.56:2,0,63	0/1:8,0:8:21.46:25,0,21	0/0:5,0:3:7.19:0,7,44	0/0:4,0:1:2.94:0,3,18	1/1:3,23:24:38.91:417,39,0	0/1:29,0:27:16.20:16,0,149	0/1:9,0:7:4.04:4,0,38	0/1:28,0:24:55.17:55,0,106	1/1:2,8:8:15.03:167,15,0	1/1:5,15:18:35.31:323,35,0	1/1:1,17:17:23.94:260,24,0	1/1:3,7:7:14.96:148,15,0	1/1:8,0:8:20.68:135,21,0	1/1:0,12:12:18.05:212,18,0	0/1:18,0:17:13.07:13,0,89	1/1:6,8:13:18.44:290,18,0	0/1:35,0:31:34.78:35,0,113	1/1:8,17:21:10.86:441,11,0	0/1:22,0:18:18.34:18,0,106	0/1:13,0:13:11.86:12,0,64	0/0:14,0:13:24.14:0,24,122	1/1:1,3:3:5.95:53,6,0	1/1:10,2:12:23.34:172,23,0	1/1:4,12:14:20.96:218,21,0	1/1:5,11:15:14.84:124,15,0	0/1:15,0:13:47.51:67,0,48	0/1:26,0:22:8.27:8,0,130	0/1:19,1:12:5.16:5,0,29
chr10	90097558	.	TA	T	3175.40	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-3.435;DP=442;FS=27.131;HRun=3;HaplotypeScore=49.3481;InbreedingCoeff=0.2970;MQ=41.22;MQ0=45;MQRankSum=2.697;QD=7.30;ReadPosRankSum=0.715;VQSLOD=-0.7264;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:19:6.87:21,0,7	1/1:5,2:7:15.16:118,15,0	0/0:4,0:2:0:0,0,0	0/0:3,0:1:0.89:0,1,2	1/1:26,0:24:35.49:230,35,0	1/1:26,2:26:16.95:115,17,0	1/1:8,0:6:5.33:26,5,0	1/1:25,1:23:19.44:228,19,0	1/1:10,0:8:14.77:94,15,0	1/1:17,3:18:29.61:222,30,0	1/1:18,0:17:20.63:129,21,0	1/1:9,1:7:14.78:98,15,0	1/1:8,0:8:20.58:124,21,0	1/1:12,0:12:17.72:112,18,0	1/1:13,4:16:13.72:139,14,0	1/1:11,2:12:32.33:238,32,0	1/1:28,4:28:6.82:155,7,0	1/1:25,0:21:16.86:242,17,0	1/1:21,0:17:9.61:150,10,0	1/1:12,0:12:14.59:85,15,0	1/1:12,0:11:5.36:23,5,0	1/1:4,0:3:5.88:36,6,0	1/1:11,0:11:26.42:158,26,0	1/1:16,0:14:20.65:129,21,0	1/1:16,0:15:14.74:91,15,0	1/1:15,0:13:17.91:114,18,0	1/1:26,0:22:13.45:78,13,0	1/1:17,2:11:15.19:107,15,0
chr10	90098490	.	A	AAAACAAAC	14323.92	PASS	AB=0.962;AC=29;AF=0.518;AN=56;BaseQRankSum=-7.183;DP=556;FS=87.007;HRun=0;HaplotypeScore=120.6003;InbreedingCoeff=0.9160;MQ=49.41;MQ0=0;MQRankSum=-10.743;QD=51.52;ReadPosRankSum=0.103;VQSLOD=1.3833;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,14:30:17.02:1323,17,0	0/0:7,0:7:21.06:0,21,486	0/0:21,0:15:14.22:0,14,352	0/0:11,0:11:15.05:0,15,248	1/1:9,6:16:18.06:733,18,0	0/0:28,0:28:66.19:0,66,1601	0/0:27,0:27:42.13:0,42,930	0/0:29,0:28:48.15:0,48,1063	1/1:6,11:18:36.11:1385,36,0	1/1:10,6:20:38.95:1078,39,0	1/1:6,5:12:20.98:556,21,0	1/1:5,15:22:36.12:1493,36,0	1/1:12,10:22:27.09:1120,27,0	1/1:9,5:16:27.09:985,27,0	0/0:31,0:31:63.21:0,63,1468	1/1:5,8:13:15.05:622,15,0	0/0:30,0:30:60.64:0,61,1366	1/1:8,5:17:30.06:939,30,0	0/0:21,0:21:36.12:0,36,922	0/0:17,0:17:42.12:0,42,1010	0/0:19,0:19:42.14:0,42,1042	1/1:8,10:20:23.91:692,24,0	1/1:5,9:16:21.07:870,21,0	1/1:9,11:22:39.13:1590,39,0	1/1:2,7:9:21.07:871,21,0	0/1:24,1:25:67.32:67,0,1075	0/0:27,0:27:63.22:0,63,1585	0/0:10,0:10:27.06:0,27,586
chr10	90099501	.	G	GC	1959.79	PASS	AB=0.723;AC=31;AF=0.596;AN=52;BaseQRankSum=-3.138;DP=186;FS=29.752;HRun=4;HaplotypeScore=38.2376;InbreedingCoeff=-0.3049;MQ=94.98;MQ0=0;MQRankSum=-3.474;QD=13.70;ReadPosRankSum=-2.100;VQSLOD=0.6655;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:5,7:12:72.27:263,0,72	0/1:3,2:5:59.84:63,0,60	0/0:17,0:17:45.09:0,45,512	0/0:17,0:17:38.75:0,39,404	0/1:4,0:7:16.27:16,0,27	1/1:0,2:2:3.01:42,3,0	1/1:0,6:6:18.06:250,18,0	1/1:0,6:6:15.05:206,15,0	0/1:6,4:10:99:141,0,136	0/1:4,3:7:65.77:66,0,92	./.	0/1:6,7:13:98.93:144,0,99	0/1:2,4:6:29.78:36,0,30	0/1:6,6:12:99:126,0,119	0/1:4,0:4:28.15:28,0,82	0/1:5,2:7:23.80:24,0,161	0/1:4,4:8:75.51:108,0,76	0/1:2,4:6:32.96:33,0,63	1/1:0,2:2:6.02:84,6,0	./.	1/1:0,9:9:14.98:186,15,0	0/1:4,0:4:28.70:35,0,29	0/1:2,2:4:15.64:75,0,16	0/1:4,2:6:29.97:30,0,95	0/0:5,0:5:6.02:0,6,71	1/1:1,2:3:6.02:81,6,0	1/1:2,0:2:3.01:40,3,0	1/1:0,2:2:3.01:42,3,0
chr10	90100921	.	A	AC	695.68	PASS	AB=0.920;AC=11;AF=0.196;AN=56;BaseQRankSum=-2.142;DP=312;FS=29.899;HRun=0;HaplotypeScore=55.7818;InbreedingCoeff=0.0086;MQ=51.12;MQ0=6;MQRankSum=6.503;QD=5.35;ReadPosRankSum=5.056;VQSLOD=1.5399;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:11:26.66:0,27,168	0/0:7,0:7:17.74:0,18,115	0/0:23,0:7:3.30:0,3,43	0/1:14,0:5:0.48:0,0,21	0/0:11,0:11:28.34:0,28,173	0/1:12,0:12:8.60:106,0,9	0/1:10,3:13:73.79:74,0,74	0/1:17,1:17:63.33:63,0,117	0/0:7,0:7:17.64:0,18,107	0/0:8,0:8:23.81:0,24,178	0/0:8,0:8:20.84:0,21,154	0/0:14,0:13:26.52:0,27,177	0/0:3,0:3:8.86:0,9,57	0/0:16,0:16:38.62:0,39,269	0/0:11,0:11:32.67:0,33,224	0/0:15,0:15:38.09:0,38,245	0/0:6,0:5:11.85:0,12,78	0/0:4,0:3:8.93:0,9,64	0/1:11,2:13:45.03:127,0,45	0/1:10,1:11:16.54:107,0,17	1/1:5,1:6:13.72:108,14,0	0/0:3,0:3:8.92:0,9,61	0/0:11,0:11:26.56:0,27,169	0/0:5,0:4:0.47:0,0,1	0/0:18,0:17:46.41:0,46,320	0/1:9,1:10:50.48:67,0,50	0/1:17,1:18:91.04:91,0,102	0/1:13,2:15:69.44:97,0,69
chr10	90101492	.	AGGGCTGG	A	9579.23	PASS	AB=0.558;AC=17;AF=0.304;AN=56;BaseQRankSum=15.247;DP=655;FS=11.985;HRun=0;HaplotypeScore=157.6850;InbreedingCoeff=0.9055;MQ=83.32;MQ0=1;MQRankSum=-13.714;QD=52.63;ReadPosRankSum=-2.027;VQSLOD=3.6703;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,3773	0/0:10,0:10:30.10:0,30,1192	0/0:25,0:25:57.13:0,57,1652	0/0:29,0:29:65.87:0,66,1907	0/0:28,0:28:78.20:0,78,2891	1/1:1,17:18:39.13:990,39,0	1/1:1,29:30:66.18:1639,66,0	1/1:1,20:21:60.12:1265,60,0	0/0:22,0:22:63.19:0,63,2300	0/0:24,0:24:63.08:0,63,2321	0/0:12,0:12:33.11:0,33,1192	0/0:33,0:33:93.22:0,93,2786	0/0:18,0:18:54.16:0,54,1977	0/0:30,0:30:87.16:0,87,2917	0/0:25,0:25:72.21:0,72,2513	0/0:32,0:32:90.30:0,90,3453	0/0:38,0:38:99:0,111,4298	0/0:20,0:20:54.11:0,54,1747	1/1:2,16:18:48.09:1028,48,0	1/1:3,15:17:45.07:1028,45,0	1/1:0,23:23:27.09:698,27,0	0/0:22,0:22:60.05:0,60,2192	0/0:17,0:17:43.76:0,44,1601	0/0:28,0:28:84.27:0,84,3256	0/0:23,0:23:69.22:0,69,2518	0/1:6,23:29:99:1575,0,281	1/1:0,21:21:45.15:1135,45,0	1/1:0,4:4:9.03:223,9,0
chr10	90103953	.	CT	C	5974.11	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=17.890;DP=628;FS=12.379;HRun=5;HaplotypeScore=98.7971;InbreedingCoeff=0.9971;MQ=78.23;MQ0=0;MQRankSum=-5.693;QD=30.79;ReadPosRankSum=0.567;VQSLOD=3.9718;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1395	0/0:8,0:8:18.05:0,18,230	0/0:13,0:13:23.97:0,24,300	0/0:22,0:22:57.11:0,57,718	0/0:18,0:18:48.15:0,48,640	1/1:1,24:25:72.21:816,72,0	1/1:0,21:21:57.16:646,57,0	1/1:3,24:27:72.17:803,72,0	0/0:17,0:17:51.14:0,51,664	0/0:25,0:25:72.24:0,72,979	0/0:15,0:15:45.14:0,45,601	0/0:39,0:39:99:0,114,1514	0/0:22,0:22:63.20:0,63,846	0/0:21,0:21:63.20:0,63,840	0/0:26,0:26:72.22:0,72,953	0/0:34,0:34:99:0,102,1395	0/0:27,0:27:78.26:0,78,1066	0/0:30,0:30:72.23:0,72,968	1/1:2,6:8:18.05:204,18,0	1/1:0,14:14:36.10:408,36,0	1/1:0,33:33:96.27:1089,96,0	0/0:20,0:20:54.17:0,54,724	0/0:18,0:18:54.16:0,54,709	0/0:31,0:31:87.25:0,87,1155	0/0:12,0:12:33.11:0,33,451	1/1:1,23:24:69.20:782,69,0	1/1:4,18:22:54.15:612,54,0	1/1:2,18:20:54.15:612,54,0
chr10	90105700	.	GC	G	6859.53	PASS	AB=0.535;AC=17;AF=0.304;AN=56;BaseQRankSum=13.386;DP=731;FS=2.608;HRun=3;HaplotypeScore=70.6263;InbreedingCoeff=0.9152;MQ=77.39;MQ0=0;MQRankSum=-1.542;QD=31.90;ReadPosRankSum=-3.126;VQSLOD=3.7384;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,154,2203	0/0:19,0:19:57.19:0,57,820	0/0:17,0:17:48.56:0,49,626	0/0:19,0:19:45.06:0,45,610	0/0:18,0:18:54.17:0,54,751	1/1:1,13:14:39.12:484,39,0	1/1:0,22:22:60.19:744,60,0	1/1:1,23:24:69.22:855,69,0	0/0:30,0:30:90.30:0,90,1294	0/0:20,0:20:60.20:0,60,863	0/0:14,0:14:39.13:0,39,554	0/0:48,0:48:99:0,138,1949	0/0:21,0:21:60.20:0,60,864	0/0:29,0:29:84.28:0,84,1210	0/0:27,0:27:78.26:0,78,1119	0/0:27,0:27:81.27:0,81,1167	0/0:49,0:49:99:0,147,2116	0/0:36,0:36:99:0,105,1489	1/1:0,18:18:54.17:662,54,0	1/1:0,18:18:30.09:369,30,0	1/1:0,64:64:99:2009,163,0	0/0:18,0:18:54.18:0,54,773	0/0:15,0:15:42.14:0,42,604	0/0:26,0:26:75.25:0,75,1080	0/0:32,0:32:96.31:0,96,1360	0/1:3,20:23:60.46:659,0,60	1/1:0,23:23:60.19:744,60,0	1/1:0,9:9:27.08:334,27,0
chr10	90106259	.	TG	T	5110.58	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.103;DP=485;FS=0.796;HRun=1;HaplotypeScore=76.1112;InbreedingCoeff=0.9720;MQ=77.85;MQ0=0;MQRankSum=-3.506;QD=34.53;ReadPosRankSum=-1.331;VQSLOD=4.2499;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.27:0,78,1246	0/0:2,0:2:6.02:0,6,96	0/0:14,0:13:37.62:0,38,539	0/0:14,0:14:42.11:0,42,636	0/0:11,0:11:33.11:0,33,525	1/1:0,10:10:27.09:355,27,0	1/1:3,25:28:72.50:896,73,0	1/1:0,10:10:30.04:335,30,0	0/0:19,0:19:57.18:0,57,887	0/0:13,0:13:39.13:0,39,623	0/0:12,0:12:33.11:0,33,527	0/0:28,0:28:81.28:0,81,1295	0/0:13,0:13:39.13:0,39,623	0/0:28,0:28:84.29:0,84,1337	0/0:20,0:20:60.20:0,60,956	0/0:28,0:28:78.27:0,78,1244	0/0:28,0:28:81.26:0,81,1271	0/0:21,0:20:57.13:0,57,858	1/1:1,9:10:27.95:321,28,0	1/1:0,4:4:8.99:99,9,0	1/1:0,40:40:99:1422,111,0	0/0:8,0:8:21.07:0,21,336	0/0:7,0:7:18.02:0,18,244	0/0:27,0:27:66.21:0,66,1031	0/0:15,0:15:42.14:0,42,672	1/1:0,19:19:53.67:700,54,0	1/1:0,17:17:45.15:589,45,0	1/1:0,10:10:30.10:395,30,0
chr10	90106420	.	G	GC	4154.59	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=4.268;DP=448;FS=1.868;HRun=7;HaplotypeScore=50.9950;InbreedingCoeff=0.9619;MQ=68.31;MQ0=5;MQRankSum=0.208;QD=25.80;ReadPosRankSum=-1.159;VQSLOD=3.6482;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:78.12:0,78,753	0/0:10,0:10:27.04:0,27,261	0/0:12,0:11:29.62:0,30,263	0/0:11,0:9:1.82:0,2,153	0/0:12,0:12:33.05:0,33,318	1/1:0,14:14:33.10:399,33,0	1/1:9,16:24:42.13:505,42,0	1/1:9,13:22:36.08:405,36,0	0/0:15,0:15:45.07:0,45,432	0/0:13,0:13:30.04:0,30,290	0/0:6,0:6:18.03:0,18,173	0/0:21,0:20:60.10:0,60,579	0/0:8,0:8:20.07:0,20,180	0/0:15,0:15:45.07:0,45,435	0/0:17,0:17:48.06:0,48,458	0/0:18,0:18:54.09:0,54,521	0/0:23,0:23:63.10:0,63,608	0/0:22,0:22:60.09:0,60,577	1/1:4,9:12:24.07:289,24,0	1/1:1,11:12:27.08:326,27,0	1/1:0,28:28:65.82:797,66,0	0/0:9,0:9:27.04:0,27,261	0/0:12,0:12:30.04:0,30,284	0/0:23,0:22:60.04:0,60,566	0/0:9,0:9:24.04:0,24,231	1/1:3,21:24:63.17:746,63,0	1/1:1,15:16:42.13:507,42,0	1/1:0,7:7:15.05:181,15,0
chr10	90110755	.	CAAA	C	4892.55	PASS	AB=0.667;AC=22;AF=0.393;AN=56;BaseQRankSum=-3.679;DP=637;FS=2.217;HRun=14;HaplotypeScore=100.3263;InbreedingCoeff=0.7090;MQ=74.88;MQ0=0;MQRankSum=-2.998;QD=18.39;ReadPosRankSum=8.086;VQSLOD=3.5442;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:38:80.33:0,80,765	1/1:3,6:9:14.99:175,15,0	0/1:18,1:17:14.73:15,0,221	0/0:11,0:11:11.59:0,12,147	0/0:12,0:33:70.10:0,70,1042	0/1:4,19:24:0.96:443,0,1	1/1:4,13:18:11.34:361,11,0	1/1:6,24:31:64.40:779,64,0	0/0:11,0:28:39.12:0,39,572	0/0:9,0:30:81.22:0,81,1208	0/0:12,0:26:60.17:0,60,897	0/0:6,0:22:24.08:0,24,395	0/0:14,0:26:42.12:0,42,665	0/0:9,0:20:42.10:0,42,625	1/1:2,24:30:55.47:610,55,0	0/0:10,0:33:36.10:0,36,536	1/1:2,15:19:47.96:526,48,0	0/0:10,0:17:48.12:0,48,696	1/1:5,10:15:30.01:351,30,0	1/1:9,16:25:29.83:350,30,0	0/1:6,20:28:47.28:405,0,47	0/0:17,0:20:49.41:0,49,787	0/0:7,0:19:30.61:0,31,402	0/0:9,0:27:27.08:0,27,422	0/0:4,0:20:39.13:0,39,595	0/1:9,9:19:99:262,0,134	1/1:5,17:23:48:544,48,0	1/1:2,3:5:5.97:70,6,0
chr10	90110878	.	G	GAAAC	21470.64	PASS	AB=0.935;AC=35;AF=0.625;AN=56;BaseQRankSum=-13.059;DP=633;FS=4.208;HRun=0;HaplotypeScore=91.5728;InbreedingCoeff=0.9177;MQ=77.99;MQ0=0;MQRankSum=-4.342;QD=54.77;ReadPosRankSum=2.559;VQSLOD=5.8459;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:28:66.23:1733,66,0	1/1:0,4:5:12.04:323,12,0	0/0:22,0:22:60.15:0,60,1006	0/0:14,0:14:22.87:0,23,429	1/1:3,16:20:39.05:960,39,0	0/0:24,0:24:69.17:0,69,1177	0/0:17,0:17:39.06:0,39,639	0/0:37,0:36:99:0,99,1709	1/1:2,20:23:51.18:1374,51,0	1/1:3,23:26:66.17:1557,66,0	1/1:2,15:18:39.13:988,39,0	1/1:1,26:27:57.20:1537,57,0	1/1:2,20:22:51.18:1374,51,0	1/1:1,29:32:72.25:1921,72,0	1/1:0,20:20:39.13:1050,39,0	1/1:2,29:32:75.26:2004,75,0	1/1:0,22:25:54.19:1420,54,0	1/1:0,18:20:42.14:1132,42,0	0/0:30,0:30:81.24:0,81,1390	0/0:25,0:25:69.24:0,69,1309	0/0:28,0:28:81.28:0,81,1536	1/1:1,12:13:33.11:872,33,0	1/1:0,29:29:75.26:1986,75,0	1/1:0,10:11:17.66:485,18,0	1/1:0,11:12:27.09:727,27,0	0/1:27,2:29:27.72:28,0,1284	0/0:28,0:28:84.23:0,84,1539	0/0:16,0:16:48.16:0,48,910
chr10	90111297	.	CT	C	9073.96	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-4.325;DP=545;FS=0.825;HRun=4;HaplotypeScore=73.3250;InbreedingCoeff=0.5524;MQ=65.69;MQ0=5;MQRankSum=0.797;QD=18.48;ReadPosRankSum=1.058;VQSLOD=4.2920;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,12:22:59.58:590,60,0	1/1:10,0:10:0.55:31,1,0	0/0:36,0:14:20.55:0,21,125	0/0:18,0:7:4.10:0,4,87	1/1:29,0:29:74.52:576,75,0	1/1:4,10:14:12.06:116,12,0	1/1:0,21:21:33.09:373,33,0	1/1:4,27:31:76.90:783,77,0	1/1:14,0:14:27:236,27,0	1/1:18,0:18:45:393,45,0	1/1:13,0:13:32.86:275,33,0	1/1:8,0:8:14.97:127,15,0	1/1:19,0:19:39:341,39,0	1/1:7,1:8:11.94:97,12,0	1/1:17,0:17:15.35:136,15,0	1/1:29,1:29:54:483,54,0	0/1:26,0:25:34.97:110,0,35	1/1:24,3:27:61.27:571,61,0	1/1:4,16:20:36.90:367,37,0	1/1:6,21:27:56.88:574,57,0	1/1:3,8:10:3.21:36,3,0	1/1:6,0:6:14.76:112,15,0	1/1:11,0:11:26.91:221,27,0	1/1:10,0:10:24:211,24,0	1/1:16,0:16:33.01:291,33,0	1/1:1,23:24:72.07:751,72,0	1/1:2,31:33:72.31:839,72,0	1/1:4,21:24:36.96:434,37,0
chr10	90111300	.	TTA	T	8217.19	PASS	AB=0.975;AC=44;AF=0.786;AN=56;BaseQRankSum=-4.335;DP=547;FS=15.124;HRun=0;HaplotypeScore=83.3951;InbreedingCoeff=0.2959;MQ=64.81;MQ0=5;MQRankSum=1.728;QD=17.01;ReadPosRankSum=3.209;VQSLOD=3.5470;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,2:23:11.51:253,12,0	0/0:10,0:11:19.14:0,19,125	0/0:35,0:13:24.69:0,25,214	0/0:18,0:7:3.72:0,4,127	1/1:0,28:29:74.67:869,75,0	0/1:14,1:15:56.40:56,0,58	1/1:21,0:21:24.26:94,24,0	0/1:33,0:32:10.54:295,0,11	1/1:0,14:14:27.05:421,27,0	1/1:0,17:17:48.03:577,48,0	1/1:1,12:14:35.99:490,36,0	1/1:0,8:8:15.05:229,15,0	1/1:0,17:18:39.13:593,39,0	1/1:1,8:9:11.97:159,12,0	0/1:17,0:18:54.78:55,0,146	1/1:1,26:28:53.54:775,54,0	0/1:24,0:24:41.43:41,0,245	1/1:5,19:27:41.15:802,41,0	0/1:19,1:20:41.44:216,0,41	0/1:25,1:26:19.44:152,0,19	1/1:9,0:8:2.28:7,2,0	1/1:0,6:6:14.89:194,15,0	1/1:0,11:12:26.63:370,27,0	1/1:1,9:10:21.54:331,22,0	1/1:0,17:17:33.11:517,33,0	1/1:23,1:24:62.53:375,63,0	1/1:34,0:34:36.88:191,37,0	1/1:23,2:24:15.79:155,16,0
chr10	90114114	.	CAGTAAGTGATT	C	52105.04	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.626;DP=669;FS=3.319;HRun=0;HaplotypeScore=263.9188;InbreedingCoeff=0.9896;MQ=79.64;MQ0=0;MQRankSum=-11.864;QD=84.86;ReadPosRankSum=7.369;VQSLOD=4.5016;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:4,28:32:72.25:2566,72,0	1/1:0,11:11:27.09:978,27,0	0/0:26,0:26:75.25:0,75,3395	0/0:29,0:29:78.07:0,78,3005	1/1:3,27:30:78.27:2714,78,0	1/1:0,22:22:63.22:2283,63,0	1/1:7,25:32:66.23:2391,66,0	1/1:7,29:36:87.21:2720,87,0	1/1:0,25:25:57.20:2066,57,0	1/1:0,18:18:54.19:1947,54,0	1/1:2,12:14:33.11:1172,33,0	1/1:3,23:26:63.22:2284,63,0	1/1:3,29:32:81.28:2934,81,0	1/1:1,35:36:92.98:3331,93,0	1/1:3,29:32:81.28:2936,81,0	1/1:0,24:24:72.25:2610,72,0	1/1:3,15:18:36.12:1305,36,0	1/1:1,13:14:24.08:870,24,0	1/1:4,17:21:51.15:1621,51,0	1/1:2,19:21:51.18:1827,51,0	1/1:3,13:16:30.07:1085,30,0	1/1:3,22:25:57.20:2018,57,0	1/1:2,24:26:66.23:2367,66,0	1/1:3,13:16:29.79:1008,30,0	1/1:0,15:15:39.13:1414,39,0	1/1:8,26:34:78.27:2828,78,0	1/1:2,28:30:62.86:2283,63,0	1/1:1,7:8:15.05:544,15,0
chr10	90117285	.	A	ACTCAAATTGGAAGGTTTTCGC	45576.05	PASS	AB=0.735;AC=54;AF=0.964;AN=56;BaseQRankSum=1.222;DP=332;FS=31.165;HRun=0;HaplotypeScore=393.3241;InbreedingCoeff=-0.0438;MQ=68.37;MQ0=0;MQRankSum=-3.229;QD=137.28;ReadPosRankSum=2.905;VQSLOD=3.6260;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:36.12:1912,36,0	1/1:13,0:13:30.08:1239,30,0	0/1:6,1:14:25.68:1356,0,26	0/1:4,1:5:32.87:338,0,33	1/1:20,0:20:45.15:2853,45,0	1/1:15,0:15:39.13:2375,39,0	1/1:9,0:9:24.08:1727,24,0	1/1:7,0:7:18.06:1177,18,0	1/1:9,0:9:15.05:1115,15,0	1/1:12,0:12:27.09:1376,27,0	1/1:12,0:12:30.10:1538,30,0	1/1:14,0:14:27.09:1404,27,0	1/1:13,0:13:24.08:1048,24,0	1/1:8,0:8:21.07:1281,21,0	1/1:16,0:16:36.11:1761,36,0	1/1:7,0:7:12.04:680,12,0	1/1:15,0:15:30.10:2072,30,0	1/1:5,0:5:9.03:542,9,0	1/1:10,0:10:30.10:1845,30,0	1/1:13,0:13:33.11:1767,33,0	1/1:7,0:7:18.06:1033,18,0	1/1:17,0:17:42.14:2820,42,0	1/1:20,0:20:54.19:3421,54,0	1/1:5,0:5:12.04:712,12,0	1/1:16,0:16:42.14:2409,42,0	1/1:12,0:12:33.11:2348,33,0	1/1:16,0:16:36.12:2434,36,0	1/1:6,0:6:13.86:989,14,0
chr10	90118895	.	ACATAT	A	3956.29	PASS	AB=0.517;AC=5;AF=0.089;AN=56;BaseQRankSum=6.800;DP=800;FS=1.588;HRun=0;HaplotypeScore=159.1375;InbreedingCoeff=0.7888;MQ=78.51;MQ0=0;MQRankSum=-2.931;QD=52.75;ReadPosRankSum=4.695;VQSLOD=4.2558;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,157,4859	1/1:0,12:12:30.10:651,30,0	0/0:25,0:25:75.25:0,75,2271	0/0:27,0:27:69.18:0,69,1995	0/0:25,0:25:75.23:0,75,2235	0/0:25,0:25:75.26:0,75,2352	0/0:29,0:29:81.28:0,81,2520	0/0:30,0:30:87.30:0,87,2737	0/0:28,0:28:78.27:0,78,2426	0/0:30,0:30:90.31:0,90,2822	0/0:19,0:19:54.19:0,54,1666	0/0:36,0:36:99:0,105,3218	0/0:30,0:30:87.28:0,87,2684	0/0:44,0:44:99:0,132,3982	1/1:2,31:33:78.27:1693,78,0	0/0:39,0:39:99:0,114,3501	0/1:2,28:30:13.89:1612,0,14	0/0:18,0:18:54.19:0,54,1587	0/0:26,0:26:75.25:0,75,2285	0/0:24,0:24:69.22:0,69,2068	0/0:45,0:45:99:0,129,3854	0/0:25,0:25:69.22:0,69,2106	0/0:30,0:30:84.26:0,84,2380	0/0:24,0:24:72.25:0,72,2256	0/0:25,0:25:69.24:0,69,2189	0/0:39,0:39:99:0,108,3342	0/0:23,0:23:69.21:0,69,1971	0/0:7,0:7:21.07:0,21,666
chr10	90119428	.	GT	G	13921.06	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=0.747;DP=644;FS=2.068;HRun=9;HaplotypeScore=78.7689;InbreedingCoeff=0.9753;MQ=64.03;MQ0=0;MQRankSum=-1.160;QD=23.32;ReadPosRankSum=1.323;VQSLOD=5.7082;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.24:0,90,1017	1/1:0,19:19:54.03:494,54,0	0/0:5,0:7:20.97:0,21,201	0/0:8,0:7:9.02:0,9,93	1/1:1,29:30:86.96:785,87,0	1/1:1,17:18:48.03:439,48,0	1/1:1,14:15:36.02:329,36,0	1/1:2,19:21:50.98:458,51,0	1/1:1,20:21:51.02:467,51,0	1/1:5,29:35:89.04:792,89,0	1/1:2,19:21:53.98:485,54,0	1/1:1,23:24:63.03:576,63,0	1/1:3,26:29:69.03:631,69,0	1/1:3,20:23:57.03:522,57,0	1/1:2,37:39:99:933,102,0	1/1:3,23:26:63.03:576,63,0	1/1:2,27:29:72.04:659,72,0	1/1:3,28:31:81.04:741,81,0	1/1:5,12:17:35.96:312,36,0	1/1:1,18:19:54.03:494,54,0	1/1:1,7:8:21:192,21,0	1/1:1,20:21:57.03:521,57,0	1/1:3,23:26:57.02:522,57,0	1/1:1,14:15:36.02:329,36,0	1/1:1,27:28:81.04:741,81,0	1/1:6,34:40:99:933,102,0	1/1:3,29:32:81.04:741,81,0	1/1:0,10:10:27.01:247,27,0
chr10	90121816	.	T	TTTC	591.18	PASS	AB=0.554;AC=4;AF=0.071;AN=56;BaseQRankSum=-0.367;DP=605;FS=1.994;HRun=0;HaplotypeScore=87.5155;InbreedingCoeff=0.5579;MQ=55.93;MQ0=33;MQRankSum=0.294;QD=10.37;ReadPosRankSum=4.944;VQSLOD=3.1039;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:40:76.23:0,76,642	1/1:1,11:12:15.06:291,15,0	0/0:49,0:12:16.19:0,16,157	0/0:30,0:5:2.42:0,2,32	0/0:38,0:35:77.53:0,78,700	0/0:18,0:16:34.26:0,34,307	0/0:9,0:9:11.97:0,12,99	0/0:31,0:29:71.87:0,72,618	0/0:13,0:13:23.95:0,24,232	0/0:22,0:22:49.31:0,49,508	0/0:25,0:24:47.25:0,47,435	0/0:15,0:13:27.33:0,27,197	0/0:21,0:19:28.69:0,29,274	0/0:17,0:14:31.53:0,32,263	0/1:3,14:18:3.38:248,0,3	0/0:11,0:11:22.39:0,22,202	0/1:6,17:23:4.87:165,0,5	0/0:25,0:23:48.59:0,49,426	0/0:19,0:18:36.87:0,37,308	0/0:24,0:23:53.54:0,54,478	0/0:12,0:12:28.01:0,28,216	0/0:5,0:5:8.69:0,9,74	0/0:10,0:10:27.67:0,28,219	0/0:16,0:12:26.41:0,26,281	0/0:22,0:22:49.85:0,50,435	0/0:35,0:35:94.73:0,95,786	0/0:15,0:14:38.76:0,39,317	0/0:24,0:23:45.71:0,46,414
chr10	90122506	.	A	ATAAT	5326.84	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-0.573;DP=276;FS=5.179;HRun=0;HaplotypeScore=44.2077;InbreedingCoeff=0.3626;MQ=64.40;MQ0=3;MQRankSum=-1.785;QD=20.49;ReadPosRankSum=2.445;VQSLOD=3.8527;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:6.02:122,6,0	1/1:7,0:7:14.79:173,15,0	0/0:12,0:10:27.04:0,27,270	0/0:4,0:4:2.32:0,2,34	1/1:8,0:8:17.79:171,18,0	1/1:0,11:12:15.05:397,15,0	1/1:2,0:2:3:25,3,0	1/1:37,0:34:99:1072,102,0	1/1:14,0:14:6.02:122,6,0	1/1:8,0:8:8.20:121,8,0	1/1:13,0:13:21.85:196,22,0	1/1:6,0:6:14.93:118,15,0	1/1:8,0:8:20.36:161,20,0	1/1:7,0:7:17.98:150,18,0	1/1:10,1:11:29.96:284,30,0	1/1:4,0:4:3.01:61,3,0	0/1:22,0:22:11.19:113,0,11	1/1:9,0:9:3.01:61,3,0	1/1:5,12:16:35.99:482,36,0	1/1:8,1:9:23.98:254,24,0	1/1:1,6:7:12.04:318,12,0	1/1:4,0:4:5.79:37,6,0	1/1:4,0:4:8.99:74,9,0	1/1:4,0:4:6.02:122,6,0	1/1:8,0:8:3.01:61,3,0	1/1:5,1:6:11.04:136,11,0	1/1:6,0:6:11.98:99,12,0	1/1:0,12:12:15.05:397,15,0
chr10	90122507	.	T	TAATTAATAAATA	5709.22	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.233;DP=290;FS=0.000;HRun=0;HaplotypeScore=79.3310;InbreedingCoeff=0.3336;MQ=63.70;MQ0=3;MQRankSum=-0.377;QD=20.84;ReadPosRankSum=4.363;VQSLOD=2.7494;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,10:17:6.02:367,6,0	1/1:0,0:7:14.79:222,15,0	0/0:12,0:10:27.04:0,27,270	0/0:4,0:4:2.74:0,3,34	1/1:1,6:7:17.79:308,18,0	1/1:12,0:12:7.77:22,8,0	1/1:2,0:2:3:25,3,0	1/1:38,0:35:77.93:868,78,0	1/1:3,7:14:6.02:367,6,0	1/1:7,0:8:8.99:280,9,0	1/1:13,0:13:24.44:263,24,0	1/1:6,0:6:14.93:118,15,0	1/1:7,0:8:21:356,21,0	1/1:7,0:7:17.98:150,18,0	1/1:11,0:11:29.96:305,30,0	1/1:1,1:5:3.01:184,3,0	1/1:2,0:26:10.28:259,10,0	1/1:0,7:13:3.01:184,3,0	1/1:18,0:17:11.24:246,11,0	1/1:9,0:9:22.53:179,23,0	1/1:7,0:7:7.67:45,8,0	1/1:4,0:4:5.79:37,6,0	1/1:4,0:4:8.99:74,9,0	1/1:1,2:4:6.02:367,6,0	1/1:0,3:10:3.01:184,3,0	1/1:5,0:6:7.28:196,7,0	0/1:6,0:6:9.75:84,0,10	1/1:12,0:12:7.77:21,8,0
chr10	90124442	.	AT	A	2121.18	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.787;DP=745;FS=5.723;HRun=1;HaplotypeScore=68.9408;InbreedingCoeff=0.9883;MQ=74.25;MQ0=0;MQRankSum=-2.943;QD=34.21;ReadPosRankSum=1.612;VQSLOD=3.6034;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1870	1/1:0,8:8:24.08:336,24,0	0/0:14,0:14:39.13:0,39,621	0/0:17,0:17:45.05:0,45,696	0/0:30,0:30:90.31:0,90,1439	0/0:28,0:28:84.23:0,84,1271	0/0:28,0:28:81.26:0,81,1271	0/0:44,0:44:99:0,132,2022	0/0:24,0:24:72.23:0,72,1123	0/0:30,0:29:90.30:0,90,1417	0/0:24,0:24:72.20:0,72,1123	0/0:27,0:27:78.25:0,78,1224	0/0:21,0:21:63.21:0,63,1003	0/0:33,0:33:99:0,99,1552	1/1:0,31:31:84.28:1175,84,0	0/0:37,0:37:99:0,111,1775	1/1:1,22:23:12.26:749,12,0	0/0:24,0:24:72.25:0,72,1146	0/0:17,0:17:51.17:0,51,816	0/0:23,0:23:69.24:0,69,1100	0/0:56,0:56:99:0,169,2650	0/0:29,0:29:87.29:0,87,1372	0/0:20,0:20:56.82:0,57,861	0/0:29,0:29:84.27:0,84,1319	0/0:27,0:27:81.28:0,81,1295	0/0:25,0:25:75.26:0,75,1200	0/0:28,0:28:84.29:0,84,1343	0/0:9,0:9:27.09:0,27,431
chr10	90126488	.	CA	C	2325.10	PASS	AB=0.708;AC=46;AF=0.821;AN=56;BaseQRankSum=-0.659;DP=448;FS=3.255;HRun=16;HaplotypeScore=60.1440;InbreedingCoeff=-0.0018;MQ=66.80;MQ0=2;MQRankSum=-2.037;QD=5.54;ReadPosRankSum=3.673;VQSLOD=2.5558;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,22:37:53.99:307,54,0	1/1:0,0:6:12.22:35,12,0	0/0:26,0:15:9.74:0,10,60	0/1:26,0:14:23.11:23,0,24	0/1:10,9:21:14.33:118,0,14	1/1:4,12:16:27.62:163,28,0	1/1:6,7:13:5.85:36,6,0	1/1:13,12:26:36.82:220,37,0	1/1:3,4:8:13.64:78,14,0	0/1:5,7:12:2.05:72,0,2	0/1:11,7:18:5.84:72,0,6	0/1:12,4:16:35.53:36,0,36	1/1:4,4:8:8.24:53,8,0	1/1:4,2:7:7.83:41,8,0	1/1:3,1:16:21.26:71,21,0	1/1:5,13:21:25.58:131,26,0	1/1:9,0:23:18.75:62,19,0	1/1:9,8:19:21.52:119,22,0	1/1:4,6:11:16.54:95,17,0	0/1:12,9:22:47.09:70,0,47	1/1:0,6:6:11.77:72,12,0	1/1:4,3:7:8.55:53,9,0	1/1:3,2:7:9.84:47,10,0	0/1:4,7:11:3.99:73,0,4	1/1:5,10:15:12.56:174,13,0	1/1:10,10:22:25.34:148,25,0	1/1:18,3:21:5.82:71,6,0	0/1:1,4:5:16.30:27,0,16
chr10	90128379	.	A	AACACACACACAC	8056.67	PASS	AB=0.531;AC=49;AF=0.907;AN=54;BaseQRankSum=-3.035;DP=448;FS=2.278;HRun=0;HaplotypeScore=149.9738;InbreedingCoeff=0.5113;MQ=57.40;MQ0=4;MQRankSum=-4.438;QD=20.98;ReadPosRankSum=1.303;VQSLOD=4.0706;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:2,0:17:1.41:1,0,17	1/1:3,4:8:9.03:528,9,0	0/0:34,0:13:14.79:0,15,322	0/0:21,0:16:23.22:0,23,377	1/1:24,0:24:5.88:54,6,0	./.	1/1:14,0:14:15.03:226,15,0	1/1:22,0:20:39.02:956,39,0	1/1:13,0:13:20.24:453,20,0	1/1:19,0:18:37.46:627,37,0	1/1:13,0:17:9.01:315,9,0	1/1:6,0:16:6.02:288,6,0	1/1:4,0:12:6.02:313,6,0	1/1:18,0:18:12.04:298,12,0	1/1:8,11:19:6.02:352,6,0	1/1:15,0:15:17.98:327,18,0	1/1:12,8:24:15.05:785,15,0	1/1:6,0:6:3.01:175,3,0	1/1:10,0:9:20.03:445,20,0	1/1:17,0:17:8.99:145,9,0	1/1:11,0:11:3.01:43,3,0	1/1:13,0:13:5.98:118,6,0	1/1:25,0:25:11.92:331,12,0	1/1:16,0:22:6.02:313,6,0	1/1:16,0:15:12.01:183,12,0	1/1:13,0:13:16.85:360,17,0	1/1:9,0:9:11.99:377,12,0	1/1:4,0:4:5.94:42,6,0
chr10	90129643	.	TACAC	T	207.71	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=2.649;DP=570;FS=2.193;HRun=0;HaplotypeScore=87.1592;InbreedingCoeff=0.5206;MQ=64.13;MQ0=27;MQRankSum=-0.497;QD=3.30;ReadPosRankSum=0.193;VQSLOD=1.7474;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:40:18.04:0,18,333	1/1:8,2:10:3.01:46,3,0	./.	./.	0/0:16,0:16:6.01:0,6,111	0/0:23,0:23:27.09:0,27,476	0/0:29,0:29:23.61:0,24,315	0/0:20,0:20:0.47:0,0,1	0/0:21,0:18:9.03:0,9,130	0/0:16,0:15:12.50:0,13,208	0/0:14,0:14:11.91:0,12,213	0/0:13,0:13:3.01:0,3,41	0/0:11,0:11:15.05:0,15,230	0/0:14,0:16:14.76:0,15,179	1/1:32,7:39:15.05:230,15,0	0/0:20,0:18:15.05:0,15,264	1/1:12,2:14:3.01:46,3,0	0/0:14,0:14:6.88:0,7,95	0/0:14,0:13:3.48:0,3,67	0/0:6,0:6:3.01:0,3,64	0/0:41,0:39:18.03:0,18,288	0/0:18,0:17:17.78:0,18,273	0/0:21,0:21:12.16:0,12,139	0/0:26,0:26:18.06:0,18,334	0/0:12,0:13:11.37:0,11,213	0/0:16,0:15:9:0,9,103	0/0:11,0:10:9.03:0,9,167	0/0:2,0:2:3.01:0,3,41
chr10	90130899	.	AAAAC	A	20138.50	PASS	AB=0.933;AC=47;AF=0.839;AN=56;BaseQRankSum=9.958;DP=685;FS=19.270;HRun=0;HaplotypeScore=127.8790;InbreedingCoeff=0.8094;MQ=66.41;MQ0=4;MQRankSum=-2.635;QD=35.15;ReadPosRankSum=3.742;VQSLOD=3.3407;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,29:31:63.22:1096,63,0	0/1:13,1:14:13.04:13,0,875	0/0:30,0:27:48.49:0,48,1342	0/0:21,0:21:30.20:0,30,997	1/1:6,25:31:69.24:1199,69,0	1/1:2,17:19:36.12:626,36,0	1/1:3,23:26:1.86:979,2,0	1/1:7,19:26:57.18:940,57,0	1/1:0,20:19:45.15:782,45,0	1/1:5,30:35:84.25:1370,84,0	1/1:3,14:17:30.10:518,30,0	1/1:4,14:18:30.10:522,30,0	1/1:2,14:16:36.12:626,36,0	1/1:6,15:21:45.15:782,45,0	0/0:32,0:32:93.32:0,93,2283	1/1:2,21:23:51.17:887,51,0	0/0:29,0:29:75.26:0,75,1781	1/1:5,16:21:7.40:643,7,0	1/1:9,16:25:24.20:654,24,0	1/1:5,24:29:63.22:1094,63,0	1/1:5,28:33:60.21:1042,60,0	1/1:1,22:23:54.18:939,54,0	1/1:4,25:29:62.83:1095,63,0	1/1:9,22:31:30.03:1051,30,0	1/1:2,18:20:48.16:834,48,0	1/1:6,22:28:63.22:1093,63,0	1/1:2,23:25:57.20:991,57,0	1/1:1,7:8:21.07:365,21,0
chr10	90131082	.	CACAT	C	6359.31	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=2.147;DP=591;FS=12.573;HRun=0;HaplotypeScore=139.3209;InbreedingCoeff=0.1364;MQ=54.03;MQ0=63;MQRankSum=-4.590;QD=12.21;ReadPosRankSum=1.108;VQSLOD=3.7265;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:23:58.58:117,0,59	1/1:1,6:7:5.51:66,6,0	0/0:35,0:26:51.94:0,52,619	0/0:35,0:26:61.58:0,62,707	1/1:14,0:13:25.24:149,25,0	0/1:19,0:14:65.25:109,0,65	0/1:23,0:22:11.97:12,0,26	1/1:21,0:18:13.87:259,14,0	1/1:24,0:18:41.85:466,42,0	1/1:16,0:13:33.95:475,34,0	1/1:17,0:14:22.47:155,22,0	1/1:18,0:16:47.77:540,48,0	1/1:15,0:14:38.74:444,39,0	1/1:13,0:11:29.91:371,30,0	1/1:4,29:33:24.01:432,24,0	1/1:26,0:21:55.06:637,55,0	1/1:2,19:21:21.02:331,21,0	1/1:19,0:17:47.47:489,47,0	0/1:16,0:12:64.03:64,0,70	0/1:17,0:15:19.67:51,0,20	0/1:37,0:32:31.02:72,0,31	1/1:23,0:18:41.62:373,42,0	1/1:21,0:17:34.29:229,34,0	1/1:26,0:20:18.10:175,18,0	1/1:13,0:7:11.84:102,12,0	0/1:18,0:15:25.21:25,0,118	0/1:28,0:17:80.16:153,0,80	1/1:7,0:4:8.92:63,9,0
chr10	90131084	.	CAT	C	5328.18	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.514;DP=592;FS=6.479;HRun=0;HaplotypeScore=131.0426;InbreedingCoeff=0.6654;MQ=50.46;MQ0=66;MQRankSum=-4.195;QD=10.21;ReadPosRankSum=-0.378;VQSLOD=4.2280;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:23:9.80:129,10,0	1/1:6,1:7:6:69,6,0	0/0:34,0:24:51.70:0,52,584	0/0:36,0:24:61.55:0,62,642	1/1:3,12:14:23.71:127,24,0	1/1:15,0:14:11.16:127,11,0	1/1:5,0:26:1.02:34,1,0	1/1:20,0:17:42.85:311,43,0	1/1:17,8:18:41.83:369,42,0	1/1:9,8:13:33.94:364,34,0	1/1:8,6:11:22.47:143,22,0	1/1:10,10:16:47.76:417,48,0	1/1:3,12:14:38.71:332,39,0	1/1:4,9:11:29.89:273,30,0	1/1:31,0:31:23.78:195,24,0	1/1:11,15:21:57.65:506,58,0	1/1:21,0:21:23.61:168,24,0	1/1:12,8:17:47.59:398,48,0	1/1:14,0:11:10.72:90,11,0	1/1:4,0:15:14.83:78,15,0	1/1:15,0:33:8.51:86,9,0	1/1:15,10:19:43.40:324,43,0	1/1:8,12:16:34.32:205,34,0	1/1:18,7:19:24.10:170,24,0	1/1:11,2:6:11.09:73,11,0	1/1:6,0:13:1.40:89,1,0	1/1:23,0:18:13.13:187,13,0	1/1:7,0:4:8.93:65,9,0
chr10	90131090	.	C	CA	2782.86	PASS	AB=0.900;AC=25;AF=0.446;AN=56;BaseQRankSum=6.050;DP=617;FS=0.441;HRun=1;HaplotypeScore=140.7924;InbreedingCoeff=-0.3343;MQ=45.29;MQ0=71;MQRankSum=-5.907;QD=5.95;ReadPosRankSum=3.995;VQSLOD=0.7183;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,4:25:60.24:116,0,60	0/0:7,0:7:6.01:0,6,56	0/0:33,0:19:39.59:0,40,493	0/0:40,0:23:60.16:0,60,731	0/1:17,0:16:4.48:4,0,106	0/1:15,4:14:12.05:120,0,12	0/1:21,0:20:10.97:11,0,54	0/1:15,12:23:99:423,0,105	1/1:21,4:17:31.29:242,31,0	0/1:18,1:14:2.03:189,0,2	0/1:13,2:11:44.03:70,0,44	0/1:18,2:16:16.67:115,0,17	0/1:20,0:18:3.66:143,0,4	0/1:15,2:13:39.57:42,0,40	0/0:32,0:32:26.01:0,26,223	0/1:23,3:20:1.42:191,0,1	0/0:24,0:24:21.40:0,21,203	1/1:17,4:18:0.52:296,1,0	0/1:18,0:14:59.28:59,0,128	1/1:12,2:12:14.07:79,14,0	0/1:29,5:29:51.94:116,0,52	0/1:21,4:19:54.63:183,0,55	0/1:21,0:17:76.19:79,0,76	0/1:20,5:19:16.37:111,0,16	0/0:8,5:5:1.56:0,2,40	0/1:15,1:13:99:163,0,123	0/1:25,5:19:67.82:163,0,68	0/1:6,2:5:28.02:28,0,91
chr10	90131091	.	AC	A	3165.64	PASS	AB=0.862;AC=25;AF=0.446;AN=56;BaseQRankSum=4.401;DP=604;FS=0.427;HRun=1;HaplotypeScore=134.6192;InbreedingCoeff=-0.3669;MQ=43.66;MQ0=72;MQRankSum=-5.068;QD=7.07;ReadPosRankSum=3.470;VQSLOD=0.9349;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,4:25:76.06:76,0,142	0/0:7,0:7:5.85:0,6,34	0/0:30,0:16:40:0,40,495	0/0:41,0:22:63.18:0,63,770	0/1:16,1:16:20.72:21,0,34	0/1:11,7:13:53.84:56,0,54	0/0:20,1:20:8.06:0,8,93	0/1:23,0:19:99:305,0,255	1/1:20,5:17:35.81:325,36,0	0/1:14,5:14:19.32:257,0,19	0/1:10,5:11:23.61:81,0,24	1/1:16,4:16:19.54:237,20,0	0/1:18,1:17:7.89:247,0,8	0/1:16,1:13:55.38:134,0,55	0/0:32,0:32:31.13:0,31,219	1/1:22,4:20:6.08:342,6,0	0/0:25,0:25:23.89:0,24,184	0/1:17,4:18:10.79:386,0,11	0/1:11,3:10:4.53:5,0,206	0/1:12,2:12:17.92:45,0,18	0/1:31,4:30:89.79:105,0,90	0/1:20,5:19:23.44:231,0,23	0/1:19,2:16:42.68:76,0,43	0/1:19,5:18:22.03:121,0,22	0/1:11,1:5:12.34:12,0,14	0/1:15,2:14:99:126,0,176	0/1:20,9:18:99:118,0,204	0/1:6,2:5:28.01:28,0,122
chr10	90131093	.	ACAC	A	4058.24	PASS	AB=0.920;AC=30;AF=0.536;AN=56;BaseQRankSum=3.500;DP=608;FS=2.058;HRun=0;HaplotypeScore=141.6995;InbreedingCoeff=0.4029;MQ=43.54;MQ0=72;MQRankSum=-5.273;QD=10.00;ReadPosRankSum=3.325;VQSLOD=3.5406;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:25:9.30:9,0,300	0/0:7,0:7:5.04:0,5,33	0/0:28,0:14:34.66:0,35,432	0/0:40,0:21:60.19:0,60,769	1/1:4,10:16:7.56:173,8,0	0/0:18,0:13:17.73:0,18,274	0/0:23,0:22:12.04:0,12,206	0/1:23,0:19:27.91:28,0,530	1/1:17,6:16:29.87:328,30,0	1/1:11,8:14:40.26:481,40,0	1/1:8,5:10:8.48:97,8,0	1/1:11,10:17:36.54:471,37,0	0/1:9,11:19:0.86:394,0,1	1/1:9,7:13:23.63:283,24,0	0/0:31,0:31:22.31:0,22,196	1/1:12,13:21:35.34:516,35,0	0/0:25,0:25:16.16:0,16,149	0/1:13,7:18:30.22:382,0,30	0/1:14,0:10:44.04:44,0,300	0/0:13,0:11:5.17:0,5,112	0/1:36,0:31:24.91:25,0,207	1/1:16,7:19:36.59:313,37,0	1/1:9,12:16:27.26:273,27,0	1/1:19,7:20:7.22:112,7,0	1/1:10,2:5:9.02:111,9,0	0/0:17,0:14:20.59:0,21,458	0/1:31,0:20:11.08:11,0,491	0/1:8,0:5:6.25:6,0,152
chr10	90131095	.	AC	A	2858.73	PASS	AB=0.957;AC=25;AF=0.446;AN=56;BaseQRankSum=5.096;DP=608;FS=4.112;HRun=1;HaplotypeScore=135.0168;InbreedingCoeff=0.6701;MQ=43.30;MQ0=72;MQRankSum=-4.815;QD=10.32;ReadPosRankSum=3.462;VQSLOD=1.9927;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:26:21.56:0,22,330	0/0:7,0:7:5.85:0,6,34	0/0:26,0:13:28.64:0,29,348	0/0:38,0:19:57.16:0,57,700	1/1:17,0:16:6.63:170,7,0	0/0:18,0:13:16.48:0,16,226	0/0:24,0:23:15.05:0,15,206	0/0:24,0:20:53.15:0,53,561	1/1:21,1:14:23.08:203,23,0	1/1:17,2:14:28.73:352,29,0	1/1:14,0:10:7.44:86,7,0	1/1:21,1:18:37.94:380,38,0	0/1:21,0:19:4.94:287,0,5	1/1:17,0:13:26.58:229,27,0	0/0:33,0:33:37.22:0,37,295	1/1:25,2:21:34.40:361,34,0	0/0:27,0:27:29.38:0,29,246	0/1:17,3:17:45.10:246,0,45	0/1:16,0:12:12.47:12,0,280	0/0:13,0:11:4.91:0,5,88	0/0:34,0:29:0.42:0,0,164	1/1:20,3:17:28.40:243,28,0	1/1:20,0:15:24:279,24,0	1/1:21,6:21:9.82:119,10,0	1/1:11,1:5:9.02:98,9,0	0/0:18,0:15:35.94:0,36,437	0/0:31,0:20:11.19:0,11,428	0/0:8,0:5:4.10:0,4,127
chr10	90131096	.	C	CA	2014.22	PASS	AB=0.922;AC=22;AF=0.393;AN=56;BaseQRankSum=4.636;DP=609;FS=6.845;HRun=1;HaplotypeScore=140.2167;InbreedingCoeff=0.5316;MQ=42.23;MQ0=70;MQRankSum=-6.013;QD=7.27;ReadPosRankSum=3.710;VQSLOD=0.9303;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:26:35.25:0,35,294	0/0:7,0:7:6.01:0,6,56	0/0:25,0:11:25.63:0,26,309	0/0:38,0:19:51.16:0,51,641	1/1:14,3:16:25.27:220,25,0	0/0:18,0:13:16.47:0,16,130	0/0:25,0:24:14.94:0,15,161	0/0:25,0:21:53.79:0,54,574	1/1:19,2:13:16.12:96,16,0	0/1:16,3:14:16.42:229,0,16	0/1:13,1:10:4.40:79,0,4	1/1:17,4:18:20.56:242,21,0	0/1:15,6:19:8.59:183,0,9	1/1:14,2:13:22.59:166,23,0	0/0:34,0:34:38.34:0,38,390	1/1:27,0:21:15.26:199,15,0	0/0:27,0:27:32.34:0,32,324	0/1:20,0:17:79.03:142,0,79	0/1:16,0:12:1.19:1,0,244	0/0:12,0:10:4.88:0,5,50	0/0:34,0:29:8.05:0,8,135	0/1:21,1:17:6.21:191,0,6	1/1:18,5:18:24:278,24,0	1/1:26,1:21:1.42:79,1,0	1/1:11,1:6:8.96:102,9,0	0/0:19,0:16:36.02:0,36,417	0/0:30,0:19:17.96:0,18,340	0/0:8,0:5:11.95:0,12,121
chr10	90131975	.	T	TACACACAC	6346.77	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-2.092;DP=535;FS=0.000;HRun=0;HaplotypeScore=150.6985;InbreedingCoeff=0.2315;MQ=49.09;MQ0=9;MQRankSum=2.170;QD=12.44;ReadPosRankSum=0.589;VQSLOD=3.8934;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:0.47:1,0,0	0/1:7,0:5:0:0,0,0	1/1:29,0:18:8.19:36,8,0	0/0:25,0:16:1.85:0,2,44	1/1:7,4:11:3.01:124,3,0	1/1:28,0:26:1.36:41,1,0	1/1:23,0:23:12.75:118,13,0	1/1:27,0:20:6:53,6,0	1/1:7,8:16:12.02:496,12,0	1/1:19,9:33:38.78:932,39,0	1/1:19,0:19:3.01:99,3,0	1/1:15,5:20:21.07:826,21,0	1/1:9,3:15:9.03:312,9,0	1/1:7,10:18:9.03:372,9,0	1/1:12,0:12:2.99:24,3,0	1/1:6,10:19:21.07:809,21,0	1/1:19,0:18:10.24:205,10,0	1/1:11,0:11:10.75:171,11,0	1/1:16,0:16:14.91:87,15,0	1/1:12,0:12:8.98:73,9,0	1/1:15,0:15:2.97:20,3,0	1/1:11,7:18:3.01:124,3,0	1/1:14,6:23:3.01:124,3,0	1/1:16,7:25:18.06:625,18,0	1/1:17,14:32:10.97:495,11,0	1/1:26,0:25:17.10:113,17,0	1/1:10,0:10:8.56:49,9,0	1/1:5,0:5:2.43:18,2,0
chr10	90132524	.	ACGCACG	A	2949.20	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=10.491;DP=688;FS=20.627;HRun=0;HaplotypeScore=253.9742;InbreedingCoeff=-0.1981;MQ=45.13;MQ0=2;MQRankSum=-9.334;QD=7.18;ReadPosRankSum=8.816;VQSLOD=0.6525;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:2.99:0,3,23	1/1:2,11:13:5.97:90,6,0	0/0:38,0:18:38.85:0,39,795	0/0:35,0:27:47.85:0,48,1398	0/0:20,0:20:8.76:0,9,64	0/1:18,0:18:19.47:45,0,19	0/1:25,0:25:30.33:132,0,30	0/1:11,0:11:12.64:13,0,23	0/1:30,0:30:15.49:83,0,15	0/1:30,0:30:45:769,0,45	0/0:12,0:12:5.80:0,6,46	0/1:49,0:49:99:166,0,143	0/1:22,0:22:41.93:152,0,42	0/1:42,0:42:94.30:214,0,94	1/1:4,17:21:9.47:208,9,0	0/1:23,0:23:29.94:69,0,30	1/1:9,11:20:5.69:271,6,0	0/1:12,0:12:19.50:112,0,20	0/1:22,0:22:41.78:198,0,42	0/0:22,0:22:2.85:0,3,24	0/0:34,0:34:5.99:0,6,49	0/0:31,0:31:10.70:0,11,110	0/0:15,0:15:8.98:0,9,74	0/0:30,0:30:18.57:0,19,138	0/1:29,0:29:23.73:24,0,110	0/1:28,0:28:61.73:346,0,62	0/1:14,0:14:59.41:189,0,59	1/1:2,0:2:3.01:34,3,0
chr10	90132528	.	ACG	A	926.96	PASS	AB=0.982;AC=31;AF=0.574;AN=54;BaseQRankSum=7.772;DP=663;FS=25.639;HRun=0;HaplotypeScore=238.8194;InbreedingCoeff=0.3027;MQ=44.74;MQ0=2;MQRankSum=-7.508;QD=2.14;ReadPosRankSum=6.960;VQSLOD=0.9535;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:13,0:13:5.25:24,5,0	0/1:34,1:18:28.37:28,0,365	0/0:33,0:24:49.04:0,49,832	0/0:18,0:18:2.10:0,2,23	1/1:18,0:18:8.56:58,9,0	1/1:24,1:25:11.95:101,12,0	0/0:8,0:8:3.17:0,3,6	1/1:27,0:27:3.81:19,4,0	0/1:29,0:29:14.27:98,0,14	0/0:12,0:12:2.99:0,3,25	0/0:45,0:45:9.88:0,10,91	0/1:21,0:21:20.18:20,0,36	0/1:42,0:42:30.83:37,0,31	1/1:22,0:22:7.07:45,7,0	0/1:22,0:22:2.74:3,0,8	1/1:20,0:20:19.54:123,20,0	0/1:10,0:10:9.79:32,0,10	1/1:18,0:18:24.50:158,24,0	1/1:20,0:20:2.71:13,3,0	0/1:35,3:38:0.05:0,0,0	0/0:31,0:31:5.92:0,6,42	0/0:14,0:14:5.71:0,6,32	0/0:30,0:30:13.17:0,13,72	1/1:28,0:28:2.10:8,2,0	1/1:28,0:28:20.48:201,20,0	1/1:15,0:15:18.13:109,18,0	1/1:2,0:2:2.83:14,3,0
chr10	90132530	.	GCGCACACACGCACA	G	6492.76	PASS	AB=0.994;AC=38;AF=0.704;AN=54;BaseQRankSum=3.595;DP=638;FS=1.242;HRun=0;HaplotypeScore=274.7921;InbreedingCoeff=0.1264;MQ=43.57;MQ0=1;MQRankSum=-3.630;QD=13.12;ReadPosRankSum=0.322;VQSLOD=3.5950;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:12,0:12:4.91:35,5,0	0/0:31,0:15:15.77:0,16,945	0/0:31,0:24:59.80:0,60,2180	1/1:16,0:16:6.51:85,7,0	1/1:9,7:16:12:220,12,0	1/1:17,10:27:26.54:573,27,0	1/1:10,0:10:26.70:257,27,0	1/1:25,0:25:6.49:70,6,0	0/1:28,0:28:99:413,0,188	1/1:12,0:12:2.98:45,3,0	0/1:44,0:44:14.65:185,0,15	0/1:19,0:20:36.32:75,0,36	0/1:40,0:40:29.49:253,0,29	1/1:24,0:24:12.40:73,12,0	0/1:22,0:22:17.60:145,0,18	0/1:20,0:20:39.28:96,0,39	0/1:10,0:10:52.03:101,0,52	1/1:0,14:14:31.68:956,32,0	1/1:1,18:19:5.71:64,6,0	1/1:32,5:37:2.55:16,3,0	0/0:30,0:30:5.92:0,6,43	0/0:13,0:13:3.22:0,3,13	1/1:29,0:29:7.62:63,8,0	0/1:26,0:26:1.81:86,0,2	1/1:6,20:26:60.07:1738,60,0	1/1:6,10:16:29.41:819,29,0	1/1:1,1:2:3.01:126,3,0
chr10	90132532	.	GCACACA	G	5632.34	PASS	AB=0.804;AC=43;AF=0.796;AN=54;BaseQRankSum=2.719;DP=632;FS=2.123;HRun=0;HaplotypeScore=238.8689;InbreedingCoeff=0.1316;MQ=42.78;MQ0=2;MQRankSum=-2.298;QD=10.61;ReadPosRankSum=3.480;VQSLOD=4.0096;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:12,0:12:5.39:51,5,0	0/0:31,0:15:26.22:0,26,663	0/0:33,0:23:54.58:0,55,1364	1/1:6,9:17:8.93:60,9,0	1/1:15,0:15:11.79:118,12,0	1/1:26,0:26:6.45:277,6,0	0/1:11,0:11:80.95:81,0,164	1/1:2,23:25:2.55:138,3,0	1/1:1,26:27:70.35:1499,70,0	1/1:3,9:12:5.93:45,6,0	1/1:15,30:46:33.32:487,33,0	1/1:10,9:20:20.68:347,21,0	1/1:8,31:39:25.94:447,26,0	1/1:20,0:24:11.65:106,12,0	1/1:3,19:22:14.92:234,15,0	1/1:15,0:20:3.26:146,3,0	0/1:3,6:10:14.88:215,0,15	0/1:14,0:14:52.80:320,0,53	1/1:18,0:18:5.81:31,6,0	1/1:37,0:37:2.66:17,3,0	0/1:2,26:28:0:0,0,1	1/1:6,6:12:2.95:19,3,0	1/1:13,15:29:16.40:132,16,0	0/1:2,21:23:5.19:81,0,5	0/1:26,0:26:47.57:495,0,48	0/1:16,0:16:10.47:243,0,10	1/1:2,0:2:3.01:44,3,0
chr10	90132560	.	G	GCT	2045.26	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=0.564;DP=643;FS=0.000;HRun=0;HaplotypeScore=250.2130;InbreedingCoeff=0.5601;MQ=38.58;MQ0=6;MQRankSum=-1.121;QD=5.31;ReadPosRankSum=-0.557;VQSLOD=2.4706;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,6:28:4.73:52,5,0	1/1:6,0:6:5.74:17,6,0	0/0:38,0:17:19.22:0,19,134	0/0:26,0:17:29.12:0,29,247	1/1:19,0:19:2.04:10,2,0	1/1:9,5:14:2.59:48,3,0	1/1:27,7:34:23.57:263,24,0	1/1:19,0:18:35.79:305,36,0	0/1:23,0:23:31.52:32,0,62	0/0:23,0:23:41.55:0,42,265	0/0:12,0:12:0:0,0,0	0/1:45,0:45:1.80:2,0,69	0/0:19,0:19:3.32:0,3,72	0/0:38,0:38:8.62:0,9,43	1/1:25,0:24:1.84:13,2,0	0/0:24,0:24:2.38:0,2,19	1/1:17,0:17:6.43:71,6,0	0/0:12,0:12:19.44:0,19,117	1/1:13,3:16:20.96:234,21,0	1/1:15,6:22:4.86:54,5,0	1/1:32,6:37:9.49:123,9,0	0/0:24,0:24:2.90:0,3,16	0/0:12,0:12:2.96:0,3,19	0/0:30,0:30:8.70:0,9,48	0/1:22,0:22:0.26:0,0,0	1/1:21,4:25:36.81:529,37,0	1/1:18,4:24:32.14:334,32,0	1/1:5,2:7:9.92:135,10,0
chr10	90132574	.	T	TCTCA	4135.33	PASS	AB=0.996;AC=44;AF=0.786;AN=56;BaseQRankSum=-1.265;DP=686;FS=3.561;HRun=0;HaplotypeScore=234.5150;InbreedingCoeff=0.0624;MQ=37.77;MQ0=9;MQRankSum=2.078;QD=6.57;ReadPosRankSum=-0.420;VQSLOD=2.0704;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,2:29:10.87:106,11,0	1/1:6,0:6:3.88:45,4,0	0/0:31,0:11:16.32:0,16,165	0/0:26,0:13:22.49:0,22,225	1/1:25,0:25:8.82:60,9,0	1/1:15,0:15:6.32:83,6,0	1/1:33,1:34:37.01:368,37,0	1/1:24,0:22:35.70:460,36,0	0/1:27,0:26:22.17:96,0,22	0/1:27,0:27:99:181,0,153	1/1:10,0:10:2.60:10,3,0	0/1:46,0:46:25.53:90,0,26	0/1:23,0:23:32.26:95,0,32	0/1:38,0:37:17.64:79,0,18	1/1:26,0:29:15.08:134,15,0	0/1:24,0:24:8.14:64,0,8	1/1:17,0:19:27.85:242,28,0	0/1:12,0:12:24.11:101,0,24	1/1:18,0:18:38.18:318,38,0	1/1:23,1:24:10.84:118,11,0	0/1:52,2:53:26.45:131,0,26	1/1:22,0:22:2.96:19,3,0	1/1:15,0:15:2.54:10,3,0	1/1:32,0:31:11.59:68,12,0	1/1:21,0:21:8.27:50,8,0	1/1:22,1:22:36.20:753,36,0	1/1:22,0:22:19.96:284,20,0	1/1:7,0:7:16.65:170,17,0
chr10	90132594	.	GCA	G	2251.93	PASS	AB=0.963;AC=28;AF=0.500;AN=56;BaseQRankSum=-5.027;DP=703;FS=4.939;HRun=0;HaplotypeScore=206.4789;InbreedingCoeff=0.3992;MQ=41.15;MQ0=9;MQRankSum=3.044;QD=4.85;ReadPosRankSum=-1.872;VQSLOD=2.7849;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,1:28:23:216,23,0	0/0:10,0:9:5.99:0,6,50	0/0:30,0:14:23.93:0,24,269	0/0:37,0:12:26.70:0,27,318	1/1:21,5:26:16.14:135,16,0	1/1:15,2:17:15.33:169,15,0	1/1:29,6:35:19.45:204,19,0	1/1:18,5:21:35.62:353,36,0	0/1:25,1:25:18.15:38,0,18	0/1:26,4:30:5.30:310,0,5	0/0:11,0:11:4.61:0,5,17	0/1:43,2:45:37.05:37,0,51	0/1:20,0:20:3.26:3,0,23	0/0:38,0:37:7.17:0,7,41	0/0:28,0:27:12.48:0,12,133	0/1:23,0:23:5.42:9,0,5	0/0:21,0:21:19.84:0,20,136	0/0:13,0:13:18.20:0,18,90	1/1:14,4:18:7.44:198,7,0	1/1:19,3:22:11.55:88,12,0	1/1:17,44:60:2.09:97,2,0	0/1:19,1:20:4.98:31,0,5	0/0:16,0:16:2.33:0,2,15	0/0:35,0:34:12.28:0,12,48	1/1:16,2:18:13.67:107,14,0	1/1:20,1:20:9.69:119,10,0	0/1:18,1:19:19.04:156,0,19	0/1:11,0:11:1.63:170,0,2
chr10	90132596	.	A	ACG	2979.02	PASS	AB=0.995;AC=41;AF=0.732;AN=56;BaseQRankSum=2.801;DP=713;FS=2.453;HRun=0;HaplotypeScore=206.3092;InbreedingCoeff=0.2698;MQ=41.78;MQ0=10;MQRankSum=2.704;QD=5.10;ReadPosRankSum=4.518;VQSLOD=2.9804;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:27:21.90:156,22,0	0/0:10,0:9:1.54:0,2,63	0/0:30,0:15:35.97:0,36,397	0/0:39,0:13:31.61:0,32,396	1/1:24,2:26:16.77:189,17,0	0/1:17,0:17:20.46:66,0,20	1/1:36,0:37:33.68:327,34,0	1/1:24,0:22:7.24:105,7,0	1/1:26,0:25:0.09:121,0,0	0/1:31,0:31:71.38:339,0,71	1/1:11,0:11:2.95:34,3,0	1/1:45,1:46:21.66:151,22,0	1/1:18,2:20:0.81:133,1,0	0/1:36,0:36:1.39:79,0,1	0/0:29,0:28:0.28:0,0,84	1/1:22,1:23:9:106,9,0	0/0:21,0:21:14.42:0,14,134	0/1:13,0:13:17.69:84,0,18	1/1:19,0:19:7.31:147,7,0	1/1:22,0:22:13.15:99,13,0	0/1:62,0:61:56.68:80,0,57	1/1:19,0:19:5.38:30,5,0	1/1:15,1:16:2.56:12,3,0	1/1:34,0:34:11.50:86,12,0	1/1:18,1:19:1.91:119,2,0	1/1:21,0:20:28.75:356,29,0	1/1:20,0:20:15.51:171,16,0	1/1:12,0:12:4.72:150,5,0
chr10	90132598	.	A	ACGCG	7456.85	PASS	AB=0.933;AC=43;AF=0.768;AN=56;BaseQRankSum=-0.192;DP=729;FS=3.931;HRun=0;HaplotypeScore=205.2524;InbreedingCoeff=0.3295;MQ=42.83;MQ0=10;MQRankSum=1.910;QD=11.93;ReadPosRankSum=4.730;VQSLOD=3.7166;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:29:16.93:276,17,0	0/1:10,0:9:0.65:1,0,115	0/0:29,0:14:33:0,33,505	0/0:44,0:18:42.59:0,43,644	1/1:19,6:25:17.27:313,17,0	1/1:19,0:19:10.20:171,10,0	1/1:37,0:37:45.24:437,45,0	0/1:25,0:23:25.13:375,0,25	1/1:15,9:24:22.36:367,22,0	1/1:27,5:32:71.97:1210,72,0	1/1:1,11:12:3.01:84,3,0	1/1:11,34:46:23.39:514,23,0	1/1:8,13:22:23.51:406,24,0	1/1:12,22:36:14.26:292,14,0	0/0:30,0:29:6.92:0,7,249	1/1:7,15:23:13.23:251,13,0	0/1:21,0:21:1.47:1,0,280	0/1:4,9:14:12.35:496,0,12	0/1:19,0:19:8.21:264,0,8	1/1:20,0:20:14.14:173,14,0	0/1:59,0:58:71.15:103,0,71	1/1:10,9:20:12.01:169,12,0	1/1:6,11:18:2.95:84,3,0	1/1:9,30:38:12.04:336,12,0	1/1:12,7:20:16.79:301,17,0	1/1:19,0:18:23.87:348,24,0	0/1:18,0:19:12.53:223,0,13	1/1:14,0:14:7.72:261,8,0
chr10	90133789	.	GAA	G	3070.93	PASS	AB=0.583;AC=20;AF=0.357;AN=56;BaseQRankSum=-6.626;DP=490;FS=13.131;HRun=13;HaplotypeScore=64.8662;InbreedingCoeff=0.7702;MQ=50.07;MQ0=44;MQRankSum=-1.191;QD=13.77;ReadPosRankSum=-1.099;VQSLOD=0.6728;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:33:56.80:536,57,0	0/0:5,0:3:6.02:0,6,82	0/0:11,0:2:2.09:0,2,21	0/0:14,0:5:9.41:0,9,69	0/0:12,0:19:4.61:0,5,118	0/1:6,9:12:11.07:206,0,11	1/1:4,11:13:24.02:232,24,0	1/1:17,12:22:46.83:440,47,0	0/0:5,0:15:19.84:0,20,69	0/0:4,0:14:28.60:0,29,131	0/0:3,0:13:22.85:0,23,111	0/1:2,1:12:16.07:16,0,21	0/0:5,0:10:15.44:0,15,63	0/0:3,0:14:19.73:0,20,68	0/0:15,0:11:24.08:0,24,348	0/0:8,0:16:18.45:0,18,106	0/0:39,0:34:57.15:0,57,767	0/0:18,0:16:19:0,19,100	1/1:2,13:16:41.75:380,42,0	1/1:4,8:11:17.53:204,18,0	1/1:7,8:13:17.31:138,17,0	0/0:2,0:7:15.44:0,15,62	0/0:5,0:14:22.68:0,23,88	0/0:4,0:9:17.98:0,18,95	0/0:6,0:10:21.22:0,21,149	1/1:5,17:21:44.12:467,44,0	1/1:7,20:24:24.98:387,25,0	1/1:10,12:20:29.75:273,30,0
chr10	90133965	.	TA	T	2438.51	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=5.751;DP=460;FS=8.884;HRun=13;HaplotypeScore=53.8178;InbreedingCoeff=0.8919;MQ=59.52;MQ0=8;MQRankSum=-0.902;QD=11.95;ReadPosRankSum=-0.275;VQSLOD=2.7798;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,25:33:65.91:454,66,0	0/0:4,0:4:12.01:0,12,111	0/0:13,0:5:9.95:0,10,81	0/0:12,0:3:0.89:0,1,2	0/0:23,1:24:38.14:0,38,511	1/1:4,13:17:32.79:241,33,0	1/1:3,6:9:8.94:66,9,0	1/1:22,19:39:29.37:367,29,0	0/0:14,0:13:19.49:0,19,290	0/0:9,0:8:21.02:0,21,199	0/0:18,2:20:0.57:0,1,278	0/0:13,0:14:35.89:0,36,335	0/0:23,0:22:57.06:0,57,539	0/0:14,0:13:27:0,27,245	0/0:15,0:15:16.64:0,17,295	0/0:15,0:15:39.03:0,39,370	0/0:16,1:18:23:0,23,372	0/0:26,1:28:47.04:0,47,605	1/1:7,22:29:59.73:448,60,0	1/1:2,12:14:32.78:241,33,0	1/1:2,9:11:17.90:131,18,0	0/0:2,0:2:6.01:0,6,58	0/0:14,0:12:27.04:0,27,263	0/0:4,0:4:11.97:0,12,107	0/0:13,0:13:39.06:0,39,380	1/1:5,11:16:14.83:199,15,0	1/1:4,17:19:41.76:306,42,0	1/1:2,10:12:26.81:197,27,0
chr10	90134575	.	ATGTGTG	A	3830.68	PASS	AB=0.895;AC=34;AF=0.630;AN=54;BaseQRankSum=6.336;DP=593;FS=7.357;HRun=0;HaplotypeScore=162.7322;InbreedingCoeff=0.3660;MQ=66.87;MQ0=14;MQRankSum=-1.269;QD=9.32;ReadPosRankSum=4.074;VQSLOD=2.1637;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:18:0:0,0,0	0/0:8,0:8:15.51:0,16,274	0/0:48,0:28:43.46:0,43,1037	0/0:66,0:33:56.21:0,56,1245	0/1:21,0:21:0:1,0,0	0/1:14,0:15:16:38,0,16	0/1:28,0:27:0:0,0,0	1/1:22,0:21:45.28:345,45,0	1/1:12,3:15:9.02:150,9,0	1/1:20,1:21:33.11:663,33,0	1/1:7,1:8:3.01:53,3,0	1/1:25,3:27:11.19:210,11,0	1/1:15,0:15:8.57:139,9,0	1/1:17,3:19:5.69:113,6,0	0/0:24,0:23:36.10:0,36,723	1/1:11,7:19:41.73:740,42,0	0/0:17,0:16:34.32:0,34,575	0/1:2,4:6:45.31:183,0,45	0/1:17,0:16:24.72:185,0,25	0/1:25,0:24:14.50:32,0,15	1/1:32,0:30:16.07:233,16,0	0/1:9,15:24:0.13:1,0,0	0/1:13,0:13:0:0,0,0	./.	1/1:11,0:11:2.06:60,2,0	1/1:24,0:22:30.28:426,30,0	1/1:24,0:24:5.85:202,6,0	0/1:3,0:4:43.22:55,0,43
chr10	90134582	.	TGTGTGTGAGA	T	4570.64	PASS	AB=0.854;AC=33;AF=0.611;AN=54;BaseQRankSum=6.640;DP=583;FS=7.262;HRun=0;HaplotypeScore=171.9113;InbreedingCoeff=0.3348;MQ=55.33;MQ0=20;MQRankSum=-0.748;QD=11.29;ReadPosRankSum=3.658;VQSLOD=3.2527;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:0:0,0,0	0/0:7,0:7:15.52:0,16,338	0/0:39,0:19:42.07:0,42,1034	0/0:54,0:22:54.18:0,54,1246	0/1:7,15:21:0.24:0,0,1	0/1:15,0:15:16:37,0,16	1/1:24,0:23:4.45:24,4,0	1/1:22,0:20:27.97:324,28,0	1/1:16,1:17:9.02:186,9,0	1/1:7,12:20:33.84:717,34,0	1/1:4,6:9:3.01:53,3,0	1/1:9,0:28:10.87:136,11,0	1/1:5,9:16:8.78:211,9,0	1/1:15,1:24:5.74:133,6,0	0/0:26,0:25:35.97:0,36,773	1/1:19,2:21:41.88:918,42,0	0/0:17,0:16:34.32:0,34,748	0/1:7,0:7:45.31:147,0,45	0/1:15,0:14:38.32:303,0,38	0/1:25,0:24:14.77:32,0,15	1/1:30,0:28:15.74:233,16,0	0/1:19,2:22:0.65:1,0,1	0/1:4,1:11:0:0,0,1	./.	0/1:5,9:14:16.55:92,0,17	1/1:27,0:23:27.96:580,28,0	1/1:24,0:24:13.82:387,14,0	0/1:5,0:4:55.02:55,0,112
chr10	90134584	.	TGTGTGAGAGAGAGAGAGA	T	5344.78	PASS	AB=1.000;AC=28;AF=0.519;AN=54;BaseQRankSum=0.120;DP=569;FS=3.310;HRun=0;HaplotypeScore=204.9980;InbreedingCoeff=0.2725;MQ=53.99;MQ0=22;MQRankSum=2.288;QD=15.72;ReadPosRankSum=3.586;VQSLOD=3.8811;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:16:0.47:0,0,1	0/0:6,0:6:15.52:0,16,513	0/0:36,0:16:36.02:0,36,676	0/0:54,0:22:52.48:0,52,810	0/0:21,0:20:1.41:0,1,3	1/1:10,3:15:8.18:119,8,0	1/1:2,20:23:5.38:197,5,0	1/1:5,17:20:47.50:751,48,0	1/1:16,0:15:5.60:90,6,0	0/1:18,0:17:99:229,0,477	1/1:10,0:10:3.01:36,3,0	0/1:30,0:28:3.95:4,0,227	0/1:16,0:16:73.99:74,0,164	0/1:26,0:24:25.10:25,0,42	0/0:26,0:25:32.95:0,33,829	0/1:22,0:20:99:174,0,319	0/0:17,0:16:42.10:0,42,1277	0/1:7,0:7:28.34:28,0,207	1/1:5,8:13:29.43:758,29,0	1/1:3,16:22:8.16:96,8,0	1/1:28,0:27:42.43:599,42,0	0/0:21,0:21:1.89:0,2,4	0/0:10,0:10:0.94:0,1,3	./.	0/1:12,0:12:1.49:1,0,102	1/1:6,19:23:12.77:1246,13,0	1/1:4,16:23:25.83:796,26,0	0/1:5,0:4:99:121,0,213
chr10	90134618	.	A	AGTGTGT	636.10	PASS	AB=1.000;AC=21;AF=0.420;AN=50;BaseQRankSum=4.609;DP=478;FS=23.058;HRun=0;HaplotypeScore=155.6095;InbreedingCoeff=-0.2247;MQ=34.53;MQ0=29;MQRankSum=-1.187;QD=1.94;ReadPosRankSum=-3.646;VQSLOD=0.2015;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:5,0:5:9.41:0,9,103	0/0:3,0:1:3.01:0,3,67	./.	0/1:19,0:16:0.01:0,0,0	1/1:10,6:14:3.01:75,3,0	0/0:27,0:25:1.87:0,2,6	0/1:30,0:27:23.05:23,0,595	0/0:21,0:20:1.44:0,1,58	0/1:18,0:17:99:120,0,585	1/1:12,0:11:2.04:6,2,0	0/1:20,0:18:96.42:96,0,157	0/1:16,0:16:99:123,0,167	1/1:25,0:23:2.09:67,2,0	0/1:22,0:20:13.16:13,0,99	0/1:24,0:21:54.44:54,0,317	0/1:18,0:17:34.06:34,0,277	0/0:5,0:4:9.03:0,9,132	0/1:21,0:21:8.30:8,0,444	1/1:21,0:17:1.76:6,2,0	0/0:23,0:15:3.47:0,3,27	0/1:11,0:11:0.01:0,0,1	./.	0/0:13,0:10:0:0,0,0	0/0:15,0:15:5.59:0,6,77	0/1:24,0:19:52.44:52,0,178	0/1:21,0:20:23.08:23,0,48	0/1:9,0:7:62.10:62,0,94
chr10	90134620	.	A	AGTGTGTGTGT	1641.46	PASS	AB=0.968;AC=27;AF=0.540;AN=50;BaseQRankSum=4.757;DP=467;FS=8.183;HRun=0;HaplotypeScore=168.6692;InbreedingCoeff=-0.4106;MQ=33.97;MQ0=29;MQRankSum=0.694;QD=4.17;ReadPosRankSum=-3.849;VQSLOD=0.1466;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/1:5,0:5:18.19:18,0,21	0/0:3,0:1:3.01:0,3,88	./.	0/1:19,0:16:0.01:0,0,0	1/1:17,0:14:3.01:76,3,0	1/1:25,0:23:4.74:33,5,0	0/1:31,0:28:99:142,0,624	0/1:21,0:20:18.79:19,0,55	0/1:18,0:17:99:252,0,585	1/1:12,0:11:2.99:23,3,0	0/1:19,0:17:66.58:143,0,67	0/1:16,0:16:99:227,0,229	1/1:24,0:22:6.30:38,6,0	0/1:12,0:19:9.02:9,0,74	0/1:16,5:21:97.64:98,0,289	0/1:17,0:16:99:174,0,104	0/1:6,0:5:2.55:3,0,100	0/1:21,0:21:99:102,0,385	1/1:20,0:16:3.01:38,3,0	0/0:23,0:15:3.40:0,3,18	0/1:9,0:9:0:0,0,0	./.	0/0:11,0:9:0.47:0,0,1	0/1:17,0:17:18.09:18,0,22	0/1:23,0:18:99:114,0,109	0/1:20,0:19:26.16:100,0,26	0/1:9,0:7:99:146,0,136
chr10	90135493	.	AGCATC	A	7565.60	PASS	AB=0.591;AC=19;AF=0.352;AN=54;BaseQRankSum=14.451;DP=511;FS=2.246;HRun=0;HaplotypeScore=148.5452;InbreedingCoeff=0.9090;MQ=77.41;MQ0=3;MQRankSum=-14.315;QD=41.80;ReadPosRankSum=-1.136;VQSLOD=4.4605;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,27:33:72.25:1462,72,0	./.	0/0:20,0:20:31.62:0,32,1304	0/0:21,0:20:56.68:0,57,1477	0/0:14,0:14:33.11:0,33,1040	1/1:4,13:15:39.13:774,39,0	1/1:3,24:26:75.25:1448,75,0	1/1:10,15:25:48.16:966,48,0	0/0:20,0:20:60.21:0,60,1831	0/0:23,0:23:69.23:0,69,2005	0/0:7,0:7:21.07:0,21,678	0/0:31,0:31:90.31:0,90,2851	0/0:16,0:16:48.16:0,48,1520	0/0:24,0:24:72.25:0,72,2260	0/0:28,0:28:78.25:0,78,2328	0/0:17,0:17:51.15:0,51,1493	0/0:20,0:20:57.20:0,57,1806	0/0:34,0:34:99:0,99,3114	1/1:4,10:14:30.10:577,30,0	1/1:2,6:7:15.05:273,15,0	1/1:10,8:18:18.05:296,18,0	0/0:13,0:13:33.10:0,33,993	0/0:7,0:7:12.04:0,12,388	0/0:26,0:26:78.27:0,78,2461	0/0:9,0:9:27.09:0,27,838	0/1:4,9:13:63.78:565,0,64	1/1:5,13:17:39.13:746,39,0	1/1:0,8:8:24.06:457,24,0
chr10	90135494	.	GC	G	2698.50	PASS	AB=1.000;AC=19;AF=0.352;AN=54;BaseQRankSum=15.334;DP=473;FS=2.246;HRun=1;HaplotypeScore=121.1032;InbreedingCoeff=0.9114;MQ=78.38;MQ0=3;MQRankSum=-14.557;QD=18.36;ReadPosRankSum=-1.005;VQSLOD=3.6112;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,2:29:71.49:527,71,0	./.	0/0:18,0:18:42.35:0,42,690	0/0:20,0:19:56.89:0,57,790	0/0:14,0:14:33.11:0,33,527	1/1:13,4:15:38.74:284,39,0	1/1:25,1:25:73.15:558,73,0	1/1:17,0:17:47.67:350,48,0	0/0:20,0:20:60.20:0,60,957	0/0:23,0:23:69.23:0,69,1074	0/0:7,0:7:21.07:0,21,336	0/0:30,0:30:90.31:0,90,1436	0/0:17,0:17:48.16:0,48,767	0/0:24,0:24:72.25:0,72,1151	0/0:27,0:27:78.25:0,78,1218	0/0:17,0:17:51.15:0,51,769	0/0:20,0:20:57.19:0,57,910	0/0:34,0:34:99:0,99,1578	1/1:10,0:10:29.81:236,30,0	1/1:6,1:6:14.96:121,15,0	1/1:8,0:8:17.93:161,18,0	0/0:13,0:13:33.10:0,33,504	0/0:7,0:7:12.04:0,12,192	0/0:26,0:26:78.27:0,78,1244	0/0:9,0:9:27.09:0,27,432	0/1:11,0:11:15.10:192,0,15	1/1:13,1:13:38.65:291,39,0	1/1:8,0:8:23.91:190,24,0
chr10	90135501	.	CACTG	C	6930.21	PASS	AB=0.550;AC=19;AF=0.352;AN=54;BaseQRankSum=14.568;DP=449;FS=3.503;HRun=0;HaplotypeScore=131.6385;InbreedingCoeff=0.9096;MQ=77.55;MQ0=2;MQRankSum=-14.749;QD=47.14;ReadPosRankSum=-0.684;VQSLOD=5.3738;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:72.25:1363,72,0	./.	0/0:16,0:16:42.97:0,43,1040	0/0:17,0:16:48.16:0,48,1084	0/0:11,0:11:30.10:0,30,829	1/1:2,13:13:39.13:720,39,0	1/1:1,24:25:75.23:1328,75,0	1/1:0,18:18:48.16:930,48,0	0/0:16,0:16:45.14:0,45,1228	0/0:18,0:18:54.18:0,54,1479	0/0:6,0:6:18.06:0,18,522	0/0:31,0:31:87.30:0,87,2521	0/0:16,0:16:45.15:0,45,1303	0/0:25,0:25:75.26:0,75,2129	0/0:22,0:22:66.18:0,66,1828	0/0:16,0:16:48.16:0,48,1377	0/0:18,0:18:54.19:0,54,1535	0/0:35,0:35:99:0,105,3024	1/1:0,8:8:24.08:454,24,0	1/1:3,6:8:15.05:252,15,0	1/1:2,8:10:16.28:245,16,0	0/0:15,0:15:36.11:0,36,865	0/0:6,0:6:15.05:0,15,422	0/0:26,0:26:78.25:0,78,2176	0/0:8,0:8:24.08:0,24,689	0/1:2,9:11:56.85:485,0,57	1/1:2,13:14:42.14:735,42,0	1/1:0,8:8:23.82:418,24,0
chr10	90135503	.	CTG	C	4952.23	PASS	AB=0.857;AC=19;AF=0.352;AN=54;BaseQRankSum=14.506;DP=456;FS=2.857;HRun=0;HaplotypeScore=120.2748;InbreedingCoeff=0.9087;MQ=76.58;MQ0=1;MQRankSum=-14.575;QD=33.69;ReadPosRankSum=-0.170;VQSLOD=6.7926;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:72.23:946,72,0	./.	0/0:15,0:16:45.04:0,45,750	0/0:16,0:15:43.32:0,43,675	0/0:12,0:12:33.06:0,33,592	1/1:13,0:13:39.02:500,39,0	1/1:26,0:26:77.57:972,78,0	1/1:18,0:18:48.16:650,48,0	0/0:14,0:14:42.13:0,42,817	0/0:17,0:17:51.18:0,51,1030	0/0:6,0:6:18.06:0,18,366	0/0:32,0:32:90.31:0,90,1817	0/0:18,0:18:51.16:0,51,986	0/0:25,0:25:75.21:0,75,1415	0/0:23,0:23:66.18:0,66,1281	0/0:17,0:17:51.16:0,51,989	0/0:18,0:18:54.18:0,54,1053	0/0:38,0:38:99:0,114,2222	1/1:9,0:9:27.08:363,27,0	1/1:6,2:8:14.88:169,15,0	1/1:10,0:10:14.21:158,14,0	0/0:14,0:14:33.10:0,33,602	0/0:6,0:6:15.05:0,15,289	0/0:26,0:26:78.27:0,78,1555	0/0:10,0:10:30.08:0,30,540	0/1:10,2:12:27.86:356,0,28	1/1:15,0:15:45.12:549,45,0	1/1:8,0:8:21.54:288,22,0
chr10	90135527	.	A	ACCAGGGGGATC	4446.37	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-0.651;DP=506;FS=1.560;HRun=0;HaplotypeScore=211.3148;InbreedingCoeff=0.9126;MQ=68.82;MQ0=0;MQRankSum=-5.858;QD=98.81;ReadPosRankSum=-0.651;VQSLOD=4.8849;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:54.18:0,54,1642	1/1:2,3:5:15.05:762,15,0	0/0:17,0:17:33.06:0,33,834	0/0:7,0:7:12.04:0,12,314	0/0:16,0:16:33.11:0,33,1097	0/0:15,0:15:30.10:0,30,966	0/0:32,0:32:69.19:0,69,2188	0/0:33,0:33:69.24:0,69,2126	0/0:11,0:11:30.10:0,30,976	0/0:14,0:14:30.10:0,30,920	0/0:4,0:4:3:0,3,25	0/0:28,0:28:69.24:0,69,2100	0/0:21,0:21:57.20:0,57,1899	0/0:31,0:31:63.22:0,63,2043	1/1:9,14:23:51.15:2384,51,0	0/0:16,0:16:42.13:0,42,1269	1/1:15,2:17:30.10:1300,30,0	0/0:39,0:39:93.21:0,93,2754	0/0:24,0:24:42.07:0,42,1293	0/0:11,0:11:24.08:0,24,725	0/0:18,0:18:30.10:0,30,1002	0/0:11,0:11:24.06:0,24,725	0/0:6,0:6:15.03:0,15,375	0/0:23,0:23:63.22:0,63,2095	0/0:6,0:6:15.05:0,15,501	0/0:16,0:16:45.11:0,45,1307	0/0:20,0:20:48.16:0,48,1490	0/0:10,0:10:30.10:0,30,945
chr10	90135571	.	AT	A	946.85	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.672;DP=532;FS=11.472;HRun=1;HaplotypeScore=72.7124;InbreedingCoeff=0.9974;MQ=75.50;MQ0=0;MQRankSum=-4.428;QD=29.59;ReadPosRankSum=1.924;VQSLOD=2.1994;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:69.24:0,69,1101	1/1:0,9:9:24.08:335,24,0	0/0:15,0:15:45.12:0,45,636	0/0:14,0:14:41.90:0,42,589	0/0:20,0:20:60.19:0,60,930	0/0:14,0:14:36.12:0,36,575	0/0:34,0:34:96.28:0,96,1505	0/0:24,0:24:69.24:0,69,1103	0/0:12,0:12:36.12:0,36,571	0/0:18,0:18:54.18:0,54,864	0/0:12,0:12:36.12:0,36,569	0/0:23,0:23:69.24:0,69,1100	0/0:21,0:21:63.21:0,63,986	0/0:27,0:27:78.27:0,78,1246	1/1:0,14:14:33.11:460,33,0	0/0:16,0:16:48.16:0,48,767	1/1:0,9:9:21.07:293,21,0	0/0:29,0:29:87.30:0,87,1391	0/0:26,0:26:78.27:0,78,1247	0/0:25,0:25:69.24:0,69,1100	0/0:18,0:18:42.14:0,42,660	0/0:17,0:17:51.16:0,51,791	0/0:15,0:15:42.14:0,42,671	0/0:25,0:25:75.26:0,75,1196	0/0:12,0:12:36.12:0,36,574	0/0:26,0:26:78.27:0,78,1247	0/0:15,0:15:42.10:0,42,642	0/0:12,0:12:36.12:0,36,575
chr10	90135749	.	C	CCTAATTCTT	10632.66	PASS	AB=0.750;AC=51;AF=0.981;AN=52;BaseQRankSum=0.673;DP=131;FS=27.537;HRun=0;HaplotypeScore=109.5625;InbreedingCoeff=-0.0751;MQ=45.22;MQ0=0;MQRankSum=-0.841;QD=82.42;ReadPosRankSum=1.963;VQSLOD=3.2182;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:15.05:455,15,0	1/1:1,0:1:3.01:120,3,0	1/1:0,0:2:6.02:110,6,0	0/1:4,1:6:36.99:276,0,37	1/1:6,0:6:14.64:508,15,0	1/1:2,0:2:3.01:114,3,0	1/1:12,0:12:24.08:530,24,0	1/1:14,0:14:38.15:1262,38,0	1/1:3,0:3:9.03:367,9,0	1/1:6,0:6:15.05:528,15,0	1/1:3,0:3:6.01:156,6,0	1/1:4,0:4:12.04:457,12,0	1/1:2,0:2:6.02:261,6,0	1/1:6,0:6:15.05:539,15,0	./.	1/1:3,0:3:9.03:257,9,0	1/1:4,0:4:11.96:352,12,0	1/1:6,0:6:9.03:369,9,0	1/1:7,0:7:21.07:805,21,0	1/1:3,0:3:9.03:343,9,0	./.	1/1:4,0:4:9.03:340,9,0	1/1:5,0:5:12.04:429,12,0	1/1:5,0:5:15.03:422,15,0	1/1:4,0:4:12.04:422,12,0	1/1:6,0:6:18.06:639,18,0	1/1:7,0:7:12.04:431,12,0	1/1:1,0:1:3.01:142,3,0
chr10	90136297	.	A	AACATACATACAT	18825.05	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-1.164;DP=418;FS=99.617;HRun=0;HaplotypeScore=238.2893;InbreedingCoeff=0.6573;MQ=60.82;MQ0=3;MQRankSum=-4.933;QD=53.63;ReadPosRankSum=2.379;VQSLOD=1.4426;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:19:6.28:0,6,113	1/1:5,3:8:15.05:839,15,0	0/0:23,0:21:14.99:0,15,313	0/0:25,0:25:10.45:0,10,547	1/1:12,0:12:5.91:220,6,0	1/1:6,3:11:21.07:978,21,0	1/1:11,1:12:9.03:470,9,0	1/1:31,0:27:48.11:1223,48,0	1/1:14,4:20:24.08:1299,24,0	1/1:11,1:19:27.09:936,27,0	1/1:8,3:11:15.05:746,15,0	1/1:12,4:16:15.05:876,15,0	1/1:6,0:8:3.01:115,3,0	1/1:6,4:13:18.06:909,18,0	1/1:17,4:22:30.09:1243,30,0	1/1:10,6:18:23.94:1330,24,0	1/1:6,0:7:12.04:275,12,0	1/1:3,0:3:6.02:82,6,0	1/1:12,1:14:15.05:730,15,0	1/1:16,7:29:33.11:1787,33,0	1/1:8,0:13:3.01:139,3,0	1/1:9,4:15:14.84:835,15,0	1/1:10,1:11:6.02:221,6,0	1/1:7,2:9:6.02:350,6,0	1/1:8,4:13:12.04:601,12,0	1/1:12,2:14:27.09:1120,27,0	1/1:6,5:12:15.05:877,15,0	1/1:4,3:10:13.60:626,14,0
chr10	90139552	.	C	CT	310.64	PASS	AB=0.909;AC=7;AF=0.125;AN=56;BaseQRankSum=4.328;DP=524;FS=6.173;HRun=7;HaplotypeScore=61.9864;InbreedingCoeff=0.7753;MQ=53.23;MQ0=26;MQRankSum=1.765;QD=5.09;ReadPosRankSum=1.685;VQSLOD=-0.1236;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:35:74.73:0,75,721	1/1:2,3:4:6.02:72,6,0	0/1:9,0:3:0.05:0,0,0	0/0:19,0:7:7.67:0,8,45	0/0:20,0:18:32.97:0,33,310	0/0:22,0:22:47.66:0,48,447	0/0:13,0:12:26.98:0,27,252	0/0:38,0:33:71.88:0,72,657	0/0:20,0:20:42.04:0,42,398	0/0:11,0:10:25.84:0,26,230	0/0:7,0:5:12.02:0,12,116	0/0:11,0:10:5.93:0,6,57	0/0:21,0:19:39.04:0,39,373	0/0:18,0:17:29.99:0,30,277	1/1:6,12:18:3.01:36,3,0	0/0:27,0:27:44.76:0,45,425	1/1:8,19:26:27.08:325,27,0	0/0:30,0:29:58.24:0,58,534	0/0:16,0:16:29.92:0,30,284	0/0:12,0:11:24.04:0,24,232	0/0:18,0:18:32.81:0,33,303	0/0:13,0:13:16.83:0,17,171	0/0:12,0:12:17.98:0,18,166	0/0:22,0:22:48:0,48,451	0/0:14,0:14:30.04:0,30,289	0/0:24,0:22:30.01:0,30,283	0/0:24,0:24:35.62:0,36,336	0/0:14,0:10:15.02:0,15,145
chr10	90139917	.	G	GA	253.85	PASS	AB=1.000;AC=7;AF=0.140;AN=50;BaseQRankSum=2.898;DP=320;FS=7.349;HRun=7;HaplotypeScore=66.7948;InbreedingCoeff=0.6217;MQ=42.67;MQ0=27;MQRankSum=-3.223;QD=4.45;ReadPosRankSum=-1.268;VQSLOD=-0.4147;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:24:1.19:1,0,227	1/1:0,4:4:9.03:108,9,0	./.	./.	0/0:18,0:15:18.01:0,18,168	0/0:9,0:9:9.47:0,9,83	0/0:14,0:13:26.97:0,27,253	0/0:19,0:18:44.99:0,45,420	0/0:14,0:15:9.13:0,9,211	0/0:15,0:13:20.99:0,21,199	0/0:7,0:7:3:0,3,29	0/0:9,0:8:9.01:0,9,87	0/0:10,0:9:13.89:0,14,142	0/0:13,0:14:22.42:0,22,216	1/1:5,3:8:5.74:72,6,0	0/0:17,0:17:27.02:0,27,255	1/1:10,9:16:17.51:196,18,0	0/0:13,0:10:15.02:0,15,143	0/0:5,0:5:12.01:0,12,112	0/0:8,0:8:15.02:0,15,144	0/0:16,0:14:15.02:0,15,144	0/0:6,0:4:3:0,3,29	0/0:8,0:7:9:0,9,81	0/0:21,0:19:26.98:0,27,259	0/0:10,0:8:8.97:0,9,78	0/0:9,0:8:20.98:0,21,192	0/0:12,0:11:7.81:0,8,59	./.
chr10	90139919	.	AAAAAAGAAC	A	999.23	PASS	AB=0.968;AC=13;AF=0.250;AN=52;BaseQRankSum=7.156;DP=335;FS=7.948;HRun=0;HaplotypeScore=88.1217;InbreedingCoeff=0.1310;MQ=42.25;MQ0=30;MQRankSum=-4.084;QD=9.00;ReadPosRankSum=3.990;VQSLOD=0.6523;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:35.65:0,36,1271	1/1:4,0:4:3.66:78,4,0	./.	0/0:5,0:1:0.47:0,0,1	0/0:19,0:15:24.08:0,24,883	0/1:9,0:9:5.89:6,0,85	0/1:15,0:13:86.93:210,0,87	0/1:20,0:18:32.81:33,0,402	0/0:14,0:14:35.97:0,36,702	0/0:18,0:15:32.85:0,33,1043	0/0:7,0:7:3.01:0,3,120	0/0:12,0:11:14.85:0,15,325	0/0:11,0:10:14.83:0,15,465	0/0:13,0:13:32.98:0,33,866	1/1:7,0:7:0.94:2,1,0	0/0:18,0:18:29.91:0,30,764	0/1:15,6:18:99:504,0,116	0/0:13,0:10:17.92:0,18,430	0/1:6,0:6:10.85:11,0,128	1/1:8,0:8:15.03:148,15,0	0/0:18,0:16:16.48:0,16,210	0/0:6,0:4:2.93:0,3,120	0/0:8,0:7:9.03:0,9,356	0/0:22,0:20:30.04:0,30,948	0/0:11,0:9:12.01:0,12,349	0/1:9,0:8:66.51:67,0,148	0/1:12,0:11:40.02:83,0,40	./.
chr10	90139936	.	A	AAG	1861.14	PASS	AB=0.909;AC=27;AF=0.482;AN=56;BaseQRankSum=-3.208;DP=391;FS=52.164;HRun=0;HaplotypeScore=62.2702;InbreedingCoeff=0.0155;MQ=47.15;MQ0=32;MQRankSum=4.982;QD=7.05;ReadPosRankSum=0.491;VQSLOD=0.9004;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:27:57.47:0,57,405	0/0:7,0:6:1.35:0,1,58	0/0:23,0:6:8.36:0,8,85	0/0:17,0:6:10.24:0,10,59	0/1:9,14:20:8.14:260,0,8	0/0:8,0:8:3.43:0,3,37	0/0:12,0:11:23.69:0,24,206	0/1:14,0:12:11.81:12,0,150	0/1:11,0:11:5.89:59,0,6	1/1:12,12:24:17.36:338,17,0	0/1:3,8:10:17.32:73,0,17	1/1:6,3:10:3.64:115,4,0	0/1:9,0:8:14.14:51,0,14	1/1:9,2:11:26.84:217,27,0	0/0:5,0:4:3.65:0,4,24	1/1:1,11:13:18.06:252,18,0	0/0:25,0:22:10.64:0,11,219	1/1:4,6:9:9.02:111,9,0	0/1:12,0:12:65.40:65,0,84	0/1:9,0:9:14.04:14,0,114	0/1:17,0:15:3.82:4,0,54	1/1:2,4:5:5.69:56,6,0	0/1:11,0:11:4.94:70,0,5	1/1:20,0:18:4.98:68,5,0	0/1:4,7:9:45.71:112,0,46	0/1:11,0:10:52.08:52,0,70	0/1:14,0:12:2.27:2,0,64	0/1:11,0:9:11.98:101,0,12
chr10	90139937	.	A	AG	795.57	PASS	AB=0.913;AC=18;AF=0.321;AN=56;BaseQRankSum=-2.958;DP=387;FS=76.091;HRun=0;HaplotypeScore=60.6363;InbreedingCoeff=0.0661;MQ=47.56;MQ0=31;MQRankSum=1.639;QD=4.37;ReadPosRankSum=3.416;VQSLOD=0.3625;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:27:61.84:0,62,426	0/0:7,0:6:11.66:0,12,74	0/0:22,0:6:11.38:0,11,115	0/0:18,0:7:1.51:0,2,40	0/1:20,1:18:40.69:79,0,41	0/0:8,0:8:8.54:0,9,51	0/0:12,0:12:6.17:0,6,159	0/0:14,0:12:25.22:0,25,181	0/1:11,0:11:24.60:25,0,102	0/1:25,1:23:60.62:117,0,61	0/1:11,0:10:19.80:20,0,41	0/1:10,1:10:11.90:64,0,12	0/1:8,2:9:29.14:49,0,29	0/1:9,1:10:22.30:63,0,22	0/0:6,0:5:8.46:0,8,44	1/1:11,1:11:17.39:94,17,0	0/0:25,0:22:38.77:0,39,248	1/1:11,0:9:8.55:44,9,0	0/0:12,0:12:6.04:0,6,113	0/0:9,0:9:16.62:0,17,107	0/0:17,0:15:12.13:0,12,70	1/1:5,1:5:5.74:48,6,0	0/1:2,8:11:24.13:104,0,24	1/1:4,12:18:13.29:209,13,0	0/1:11,0:9:32.76:33,0,49	0/0:10,0:9:16.31:0,16,98	0/0:14,0:12:6.63:0,7,76	0/1:11,0:9:19.63:20,0,22
chr10	90140076	.	A	AAAAAAAG	8572.56	PASS	AB=0.970;AC=45;AF=0.804;AN=56;BaseQRankSum=-2.070;DP=410;FS=82.350;HRun=0;HaplotypeScore=136.4670;InbreedingCoeff=0.1505;MQ=44.57;MQ0=22;MQRankSum=1.373;QD=23.62;ReadPosRankSum=-2.441;VQSLOD=0.6616;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:10.09:522,10,0	0/1:5,0:5:2.07:154,0,2	0/0:19,0:7:11.43:0,11,115	0/0:28,0:8:5.80:0,6,35	1/1:6,8:21:33.85:483,34,0	0/1:13,0:13:29.55:312,0,30	1/1:7,0:6:5.17:201,5,0	1/1:17,0:16:2.94:410,3,0	1/1:8,0:9:14.93:224,15,0	1/1:21,0:20:36.08:390,36,0	1/1:13,0:12:28.69:293,29,0	1/1:20,0:20:39.95:486,40,0	1/1:15,0:15:37.17:544,37,0	1/1:18,0:18:26.73:582,27,0	1/1:12,0:12:10.02:394,10,0	1/1:25,0:24:33.09:758,33,0	0/1:8,0:6:7.69:59,0,8	1/1:17,0:12:14.21:407,14,0	0/1:8,0:7:1.63:120,0,2	1/1:9,0:8:7.78:235,8,0	1/1:3,0:3:6:83,6,0	0/1:11,0:13:14.70:115,0,15	1/1:4,5:18:11.63:242,12,0	1/1:14,0:13:7.92:298,8,0	1/1:16,0:13:33.10:357,33,0	0/1:15,0:15:41.66:237,0,42	1/1:11,0:11:24.08:456,24,0	0/1:16,0:11:5.63:210,0,6
chr10	90140182	.	AG	A	11086.79	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=10.381;DP=659;FS=1.665;HRun=1;HaplotypeScore=73.4621;InbreedingCoeff=0.9999;MQ=88.97;MQ0=0;MQRankSum=0.011;QD=38.10;ReadPosRankSum=4.755;VQSLOD=5.4020;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,1916	0/0:14,0:14:39.13:0,39,622	0/0:24,0:24:69.23:0,69,1062	0/0:30,0:30:87.25:0,87,1289	1/1:0,24:24:63.17:857,63,0	0/0:12,0:12:36.12:0,36,575	0/0:31,0:31:93.32:0,93,1482	0/0:22,0:22:63.21:0,63,1006	1/1:0,20:20:51.17:710,51,0	1/1:0,21:21:63.21:880,63,0	1/1:0,17:17:51.14:690,51,0	1/1:0,36:36:96.32:1343,96,0	1/1:0,19:19:51.17:713,51,0	1/1:0,25:25:63.21:881,63,0	0/0:26,0:26:78.27:0,78,1244	1/1:0,23:23:69.23:965,69,0	0/0:27,0:27:75.19:0,75,1145	1/1:0,19:19:54.18:755,54,0	0/0:23,0:23:69.24:0,69,1103	0/0:17,0:17:45.15:0,45,719	0/0:34,0:34:96.33:0,96,1535	1/1:0,12:12:36.12:503,36,0	1/1:0,19:19:54.18:755,54,0	1/1:0,36:35:90.27:1237,90,0	1/1:0,20:20:57.19:797,57,0	0/0:23,1:24:30.25:0,30,1035	0/0:24,0:24:69.23:0,69,1087	0/0:17,0:17:45.15:0,45,719
chr10	90140451	.	CGTGTGTGT	C	10859.90	PASS	AB=0.592;AC=48;AF=0.857;AN=56;BaseQRankSum=3.086;DP=665;FS=0.746;HRun=0;HaplotypeScore=219.9044;InbreedingCoeff=0.3649;MQ=50.03;MQ0=2;MQRankSum=-6.375;QD=17.66;ReadPosRankSum=5.911;VQSLOD=3.4373;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,28:38:35.88:879,36,0	1/1:3,8:12:15.05:351,15,0	0/0:29,0:18:30.10:0,30,1058	0/0:20,0:13:14.41:0,14,444	0/1:7,0:27:11.92:35,0,12	1/1:3,12:17:24.08:610,24,0	1/1:3,18:22:12.51:294,13,0	1/1:16,21:35:53.65:970,54,0	1/1:5,0:21:20.18:108,20,0	0/1:9,0:26:99:170,0,147	1/1:6,0:21:15.81:79,16,0	1/1:5,0:27:9.76:145,10,0	1/1:4,0:22:34.67:185,35,0	1/1:6,2:25:28.97:155,29,0	1/1:10,19:29:45.15:1185,45,0	1/1:5,0:25:1.13:99,1,0	1/1:7,17:24:24.08:632,24,0	0/1:5,0:15:2.54:60,0,3	1/1:8,11:19:29.93:617,30,0	1/1:6,15:22:21.07:530,21,0	1/1:18,17:35:2.74:79,3,0	1/1:7,0:26:14.51:79,15,0	0/1:6,0:20:6.78:48,0,7	1/1:3,0:23:17.41:93,17,0	1/1:6,0:14:11.50:61,11,0	1/1:6,18:26:60.20:1495,60,0	1/1:3,25:28:51.17:1344,51,0	1/1:7,7:14:21.07:553,21,0
chr10	90140849	.	T	TACAC	18598.01	PASS	AB=0.563;AC=45;AF=0.804;AN=56;BaseQRankSum=-8.135;DP=755;FS=9.639;HRun=0;HaplotypeScore=142.0771;InbreedingCoeff=0.8990;MQ=58.27;MQ0=6;MQRankSum=1.138;QD=30.89;ReadPosRankSum=3.356;VQSLOD=4.5244;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:50:39.85:328,40,0	0/0:13,0:13:33.08:0,33,497	0/0:41,0:18:29.89:0,30,424	0/0:32,0:22:27.71:0,28,302	1/1:10,11:23:23.45:481,23,0	1/1:5,7:13:11.74:234,12,0	1/1:5,13:20:23.82:464,24,0	1/1:10,8:19:29.80:527,30,0	1/1:6,23:29:51.18:1260,51,0	1/1:8,26:37:87.02:1927,87,0	1/1:4,10:15:14.95:370,15,0	1/1:10,19:29:33.11:791,33,0	1/1:8,13:25:35.78:888,36,0	1/1:6,17:23:42.14:1001,42,0	0/0:29,0:29:75.26:0,75,1247	1/1:7,21:29:42.14:1037,42,0	0/0:35,0:37:81.22:0,81,1258	0/1:6,21:27:1.26:851,0,1	1/1:10,8:18:30.08:542,30,0	1/1:9,16:25:33.11:815,33,0	1/1:11,26:39:47.65:1101,48,0	1/1:13,13:28:29.84:678,30,0	1/1:4,15:19:27.02:636,27,0	1/1:5,32:38:69.10:1704,69,0	1/1:11,17:29:33.11:815,33,0	1/1:14,16:35:65.49:1205,65,0	1/1:4,15:21:33.11:794,33,0	1/1:2,8:10:6.02:148,6,0
chr10	90142012	.	CAA	C	234.13	PASS	AB=0.591;AC=5;AF=0.089;AN=56;BaseQRankSum=2.799;DP=513;FS=2.028;HRun=17;HaplotypeScore=70.7715;InbreedingCoeff=0.7357;MQ=67.26;MQ0=4;MQRankSum=2.849;QD=5.57;ReadPosRankSum=4.021;VQSLOD=-0.6079;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:28:22.83:0,23,225	1/1:2,7:9:14.80:119,15,0	0/0:24,0:13:17.63:0,18,123	0/0:11,0:8:5.92:0,6,42	0/0:30,0:33:62.26:0,62,663	0/0:12,0:13:17.32:0,17,137	0/0:14,0:16:39.09:0,39,423	0/0:33,1:35:19.14:0,19,391	0/0:13,0:13:33.01:0,33,351	0/0:22,0:23:29.99:0,30,308	0/0:17,0:22:40.62:0,41,370	0/0:14,0:14:27.02:0,27,297	0/0:11,0:13:25.87:0,26,284	0/0:10,0:11:23.38:0,23,253	0/1:4,8:13:11.21:98,0,11	0/0:13,0:15:26.42:0,26,286	1/1:6,14:20:17.67:142,18,0	0/0:17,0:22:38.94:0,39,334	0/0:15,0:14:24.05:0,24,282	0/0:19,0:21:38.46:0,38,370	0/0:13,0:15:26.39:0,26,266	0/0:10,0:10:22.82:0,23,227	0/0:10,0:10:24.05:0,24,270	0/0:11,0:11:21.07:0,21,264	0/0:24,0:25:44.81:0,45,418	0/0:19,0:21:42.56:0,43,396	0/0:22,0:22:62.41:0,62,666	0/0:24,0:26:38.98:0,39,406
chr10	90142608	.	TG	T	12037.27	PASS	AC=52;AF=1.000;AN=52;BaseQRankSum=0.995;DP=615;FS=0.000;HRun=1;HaplotypeScore=119.7390;InbreedingCoeff=-0.0060;MQ=38.71;MQ0=132;MQRankSum=0.808;QD=21.19;ReadPosRankSum=1.710;VQSLOD=4.9137;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,37:35:60.11:770,60,0	1/1:0,5:5:8.18:115,8,0	./.	./.	1/1:1,14:12:15.05:195,15,0	1/1:2,18:16:36.12:467,36,0	1/1:8,15:13:27.09:338,27,0	1/1:9,16:14:36.11:440,36,0	1/1:1,20:17:30.10:389,30,0	1/1:4,21:24:72.23:904,72,0	1/1:0,10:9:12.01:156,12,0	1/1:8,23:18:39.13:497,39,0	1/1:2,24:21:57.18:730,57,0	1/1:1,25:21:48.11:614,48,0	1/1:0,15:14:33.11:427,33,0	1/1:1,14:13:33.10:410,33,0	1/1:1,35:32:66.21:847,66,0	1/1:4,23:22:48.15:613,48,0	1/1:5,11:9:27.09:347,27,0	1/1:0,16:12:21.54:273,22,0	1/1:7,35:33:52.05:663,52,0	1/1:0,22:22:42.14:545,42,0	1/1:0,15:14:21.06:272,21,0	1/1:0,22:21:45.15:584,45,0	1/1:0,12:11:24.08:311,24,0	1/1:3,19:20:51.17:662,51,0	1/1:1,14:11:24.01:311,24,0	1/1:1,6:6:12.04:156,12,0
chr10	90145435	.	CGGTG	C	19198.76	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.224;DP=518;FS=2.220;HRun=0;HaplotypeScore=104.7505;InbreedingCoeff=0.9606;MQ=80.48;MQ0=0;MQRankSum=-9.443;QD=40.42;ReadPosRankSum=6.519;VQSLOD=5.0676;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,26:31:48.16:851,48,0	1/1:0,5:5:12.04:218,12,0	0/0:21,0:21:57.15:0,57,1289	0/0:22,0:22:25:0,25,1145	1/1:3,14:17:36.12:644,36,0	1/1:1,12:13:36.12:644,36,0	1/1:7,17:24:36.12:659,36,0	1/1:3,23:26:69.23:1236,69,0	1/1:0,13:13:33.11:606,33,0	1/1:3,11:14:33.11:606,33,0	1/1:0,9:9:24.08:441,24,0	1/1:1,21:22:51.17:937,51,0	1/1:1,11:12:33.11:605,33,0	1/1:1,14:15:38.85:716,39,0	1/1:1,13:14:33.11:607,33,0	1/1:3,21:24:51.17:938,51,0	1/1:1,28:29:78.27:1434,78,0	1/1:2,24:26:69.24:1252,69,0	1/1:6,11:17:33.11:607,33,0	1/1:3,16:19:48.16:855,48,0	1/1:4,33:37:57.66:1049,58,0	1/1:1,6:7:18.06:330,18,0	1/1:3,9:12:21.07:386,21,0	1/1:2,21:23:48.64:880,49,0	1/1:3,21:24:51.17:936,51,0	1/1:1,15:16:45.15:823,45,0	1/1:7,14:21:39.13:717,39,0	1/1:0,5:5:12.04:221,12,0
chr10	90145439	.	GGGT	G	5823.11	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=7.200;DP=502;FS=4.374;HRun=0;HaplotypeScore=139.8635;InbreedingCoeff=0.4442;MQ=80.27;MQ0=0;MQRankSum=-8.495;QD=12.69;ReadPosRankSum=9.081;VQSLOD=3.1919;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:44.25:260,44,0	1/1:5,0:5:11.73:70,12,0	0/0:21,0:21:54.19:0,54,1117	0/0:22,0:22:56.75:0,57,1092	1/1:16,1:17:32.39:200,32,0	1/1:12,0:12:32.36:198,32,0	1/1:22,0:22:1.18:177,1,0	0/1:29,0:29:52.64:307,0,53	0/1:14,0:14:1.47:163,0,1	1/1:12,0:12:32.36:197,32,0	1/1:9,0:9:23.54:144,24,0	1/1:22,0:22:15.91:268,16,0	1/1:11,0:11:32.32:196,32,0	1/1:15,0:15:38.18:233,38,0	1/1:15,0:15:0.93:163,1,0	1/1:22,0:22:50.01:306,50,0	1/1:28,0:28:76.49:468,76,0	1/1:26,0:26:65.20:397,65,0	1/1:14,0:14:32.36:198,32,0	1/1:17,1:18:38.98:261,39,0	1/1:36,0:36:22.37:305,22,0	0/1:8,0:8:13.77:87,0,14	1/1:10,0:10:20.59:126,21,0	1/1:22,0:22:47.05:287,47,0	1/1:24,0:24:18.61:274,19,0	1/1:15,1:16:10.87:229,11,0	1/1:18,1:19:38.27:236,38,0	1/1:5,0:5:11.77:72,12,0
chr10	90145441	.	GTGGT	G	11163.48	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=5.920;DP=481;FS=3.258;HRun=0;HaplotypeScore=126.3839;InbreedingCoeff=0.5776;MQ=79.78;MQ0=0;MQRankSum=-8.204;QD=25.43;ReadPosRankSum=9.776;VQSLOD=3.9562;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:47.85:508,48,0	1/1:5,0:5:12.04:145,12,0	0/0:20,0:20:54.18:0,54,1434	0/0:22,0:22:30.84:0,31,1358	1/1:15,0:15:36.06:398,36,0	1/1:13,0:13:14.06:372,14,0	1/1:18,2:20:14.02:400,14,0	0/1:27,0:27:13.88:686,0,14	1/1:14,0:14:11.09:361,11,0	1/1:11,0:11:33.06:348,33,0	1/1:9,0:9:24.06:261,24,0	1/1:22,0:22:29.13:528,29,0	1/1:11,0:11:33.08:359,33,0	1/1:14,0:14:38.81:430,39,0	1/1:14,0:14:18.09:331,18,0	1/1:21,0:21:51.12:552,51,0	1/1:29,0:29:58.20:823,58,0	1/1:25,0:25:53.13:687,53,0	1/1:12,0:12:8.08:326,8,0	1/1:17,0:17:47.86:525,48,0	1/1:34,0:34:36.60:566,37,0	0/1:8,0:8:16.92:198,0,17	1/1:9,0:9:21.05:225,21,0	1/1:21,1:22:48.59:541,49,0	1/1:21,1:22:36.15:577,36,0	1/1:16,0:16:25.11:466,25,0	1/1:17,0:17:18.11:415,18,0	1/1:5,0:5:12.03:134,12,0
chr10	90145589	.	A	AC	26843.20	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.100;DP=664;FS=13.822;HRun=0;HaplotypeScore=63.0097;InbreedingCoeff=0.9927;MQ=70.01;MQ0=0;MQRankSum=-5.884;QD=42.74;ReadPosRankSum=4.482;VQSLOD=4.1369;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:34:87.14:1445,87,0	1/1:0,9:9:24.08:383,24,0	0/0:21,0:17:37.79:0,38,520	0/0:15,0:13:16.81:0,17,255	1/1:1,29:31:84.22:1307,84,0	1/1:0,18:18:54.18:857,54,0	1/1:1,23:24:63.21:1001,63,0	1/1:0,49:49:99:2199,147,0	1/1:0,21:21:63.21:1005,63,0	1/1:2,26:28:78.20:1165,78,0	1/1:1,23:25:60.20:935,60,0	1/1:1,19:20:54.18:863,54,0	1/1:0,17:17:48.16:761,48,0	1/1:0,18:18:51.17:815,51,0	1/1:0,20:20:54.18:857,54,0	1/1:0,18:18:54.18:863,54,0	1/1:0,42:42:99:1816,114,0	1/1:2,26:28:71.79:1085,72,0	1/1:2,24:26:72.21:1095,72,0	1/1:2,32:34:90.24:1383,90,0	1/1:2,20:22:60.20:953,60,0	1/1:0,9:9:27.09:431,27,0	1/1:4,13:17:36.12:575,36,0	1/1:0,21:21:57.19:905,57,0	1/1:0,22:22:57.19:900,57,0	1/1:0,33:33:99:1571,99,0	1/1:2,21:23:69.15:1051,69,0	1/1:0,18:18:39.13:622,39,0
chr10	90146008	.	A	ACC	31946.82	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-10.104;DP=683;FS=3.487;HRun=1;HaplotypeScore=72.3960;InbreedingCoeff=0.9977;MQ=89.14;MQ0=0;MQRankSum=-11.358;QD=50.63;ReadPosRankSum=6.413;VQSLOD=4.7484;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,43:47:99:2300,120,0	1/1:1,9:10:24.08:464,24,0	0/0:23,0:23:51.04:0,51,845	0/0:29,0:29:79.99:0,80,1079	1/1:1,23:24:66.18:1236,66,0	1/1:0,29:30:72.25:1388,72,0	1/1:1,19:20:48.16:922,48,0	1/1:0,21:23:69.19:1182,69,0	1/1:0,27:27:75.26:1448,75,0	1/1:1,35:36:99:1974,105,0	1/1:1,16:17:48.16:916,48,0	1/1:1,20:21:54.19:1043,54,0	1/1:0,18:18:44.89:869,45,0	1/1:0,27:27:75.26:1448,75,0	1/1:2,23:25:63.22:1217,63,0	1/1:0,18:19:48.16:919,48,0	1/1:2,31:34:81.28:1564,81,0	1/1:0,21:22:60.21:1138,60,0	1/1:2,31:33:93.28:1746,93,0	1/1:1,20:21:48.12:889,48,0	1/1:1,28:29:81.28:1565,81,0	1/1:1,27:28:72.25:1390,72,0	1/1:1,18:19:54.18:1033,54,0	1/1:1,23:24:63.22:1217,63,0	1/1:0,11:11:24.08:464,24,0	1/1:1,24:25:75.26:1415,75,0	1/1:0,30:30:81.24:1563,81,0	1/1:0,11:11:33.11:637,33,0
chr10	90146363	.	ACCCCTGCCCCTCTG	A	4472.59	PASS	AB=0.688;AC=39;AF=0.886;AN=44;BaseQRankSum=-1.980;DP=320;FS=21.862;HRun=0;HaplotypeScore=114.5904;InbreedingCoeff=0.1672;MQ=69.21;MQ0=0;MQRankSum=-3.595;QD=20.52;ReadPosRankSum=2.170;VQSLOD=2.1848;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,2:18:4.25:71,4,0	./.	0/0:11,0:9:3.01:0,3,46	./.	1/1:4,3:7:9.03:231,9,0	./.	0/1:6,5:11:0.93:112,0,1	./.	1/1:6,3:9:3.01:117,3,0	1/1:9,0:9:3.01:44,3,0	1/1:8,4:12:3.01:117,3,0	1/1:10,4:14:6.02:153,6,0	1/1:6,5:11:4.75:228,5,0	1/1:13,7:20:21.07:815,21,0	1/1:15,0:15:2.04:6,2,0	1/1:2,5:7:15.05:582,15,0	1/1:10,0:10:6.02:151,6,0	1/1:6,2:8:6.02:232,6,0	./.	1/1:6,2:8:3.01:76,3,0	./.	1/1:4,4:8:9.03:272,9,0	1/1:3,6:9:9.03:350,9,0	0/0:10,2:12:0.89:0,1,2	1/1:4,3:7:6.02:134,6,0	1/1:11,1:12:3.01:117,3,0	1/1:10,7:17:15.05:551,15,0	1/1:5,1:6:3.01:115,3,0
chr10	90147163	.	T	TC	16116.83	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-11.320;DP=727;FS=0.895;HRun=8;HaplotypeScore=73.1444;InbreedingCoeff=0.9446;MQ=74.17;MQ0=0;MQRankSum=-1.519;QD=25.30;ReadPosRankSum=2.330;VQSLOD=5.6684;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,38:48:44.36:1018,44,0	0/0:11,0:11:24.01:0,24,220	0/0:16,0:16:32.68:0,33,260	0/0:11,0:11:14.99:0,15,137	1/1:3,24:27:54.16:623,54,0	1/1:5,19:24:54.14:611,54,0	1/1:6,31:37:16.91:954,17,0	1/1:7,17:24:22.62:522,23,0	1/1:3,31:34:59.79:942,60,0	1/1:4,19:23:29.62:578,30,0	1/1:0,22:22:57.17:658,57,0	1/1:4,30:34:78.23:900,78,0	1/1:4,23:27:66.20:761,66,0	1/1:5,22:28:44.58:749,45,0	0/0:22,0:22:63.01:0,63,567	1/1:4,24:28:35.31:665,35,0	0/0:30,0:30:62.99:0,63,575	1/1:2,21:23:63.19:727,63,0	1/1:4,18:22:57.17:658,57,0	1/1:4,22:26:57.07:627,57,0	1/1:10,49:59:80.55:1434,81,0	1/1:7,18:25:2.24:531,2,0	1/1:1,9:10:20.66:242,21,0	1/1:6,28:34:72.21:831,72,0	1/1:2,15:17:39.12:450,39,0	1/1:7,30:37:38.32:938,38,0	1/1:3,17:20:20.67:491,21,0	1/1:2,6:8:18.05:206,18,0
chr10	90147630	.	G	GAC	2256.95	PASS	AB=0.990;AC=16;AF=0.286;AN=56;BaseQRankSum=4.064;DP=679;FS=0.982;HRun=0;HaplotypeScore=149.1673;InbreedingCoeff=0.6077;MQ=43.84;MQ0=22;MQRankSum=-3.485;QD=8.92;ReadPosRankSum=-5.230;VQSLOD=2.5592;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:33:47.31:0,47,707	0/0:9,0:9:15.02:0,15,188	0/0:6,0:3:6:0,6,52	0/1:13,0:3:0:0,0,0	0/0:29,0:26:50.53:0,51,738	1/1:21,1:18:7.31:175,7,0	1/1:26,1:24:18:290,18,0	0/1:48,2:43:99:439,0,490	0/0:16,0:15:38.95:0,39,595	0/0:35,0:34:62.67:0,63,1081	0/0:20,0:18:33.10:0,33,484	0/0:30,0:29:63.11:0,63,918	0/0:15,0:15:35.59:0,36,493	0/0:16,0:16:30.07:0,30,434	0/0:37,0:35:26.98:0,27,366	0/0:27,0:26:39.45:0,39,807	0/0:17,0:15:1.85:0,2,418	0/0:18,0:18:47.53:0,48,649	0/1:27,0:19:99:297,0,247	1/1:27,0:23:17.43:191,17,0	1/1:14,0:13:6.91:102,7,0	0/0:25,0:23:30.10:0,30,445	0/0:24,0:24:48.04:0,48,711	0/0:50,0:50:76.91:0,77,1185	0/0:15,0:14:30.09:0,30,439	0/1:42,0:40:99:577,0,221	1/1:19,4:19:25.33:262,25,0	1/1:7,1:6:7.10:102,7,0
chr10	90147632	.	GAGAC	G	1353.68	PASS	AB=0.984;AC=20;AF=0.385;AN=52;BaseQRankSum=11.972;DP=689;FS=2.073;HRun=0;HaplotypeScore=176.3917;InbreedingCoeff=0.3043;MQ=43.71;MQ0=24;MQRankSum=-5.292;QD=3.55;ReadPosRankSum=-4.399;VQSLOD=1.5874;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,1:34:99:160,0,803	0/0:9,0:9:5.52:0,6,46	./.	./.	0/0:31,0:27:38.13:0,38,975	1/1:20,2:20:12.56:118,13,0	1/1:31,0:28:9.54:57,10,0	0/1:49,0:41:1.91:2,0,655	0/1:17,0:16:14.39:14,0,939	0/1:35,0:33:9.69:10,0,1491	0/0:20,0:18:30.09:0,30,693	0/0:30,0:29:54.14:0,54,1324	0/1:16,0:16:14.42:14,0,613	0/0:15,0:15:24.06:0,24,621	0/0:39,0:37:15.04:0,15,193	0/1:27,0:26:25.36:25,0,1161	0/0:17,0:15:9.75:0,10,444	0/0:18,0:18:39.72:0,40,988	0/1:28,1:21:99:191,0,358	1/1:24,1:23:8.07:56,8,0	1/1:15,0:14:6.49:80,6,0	0/0:26,0:24:8.46:0,8,731	0/0:25,0:25:21.20:0,21,987	0/0:49,0:49:69.71:0,70,1728	0/0:15,0:14:26.75:0,27,593	0/1:35,3:38:99:498,0,320	1/1:21,2:21:23.38:199,23,0	1/1:8,0:6:11.94:105,12,0
chr10	90147634	.	GAC	G	1519.72	PASS	AB=0.928;AC=17;AF=0.327;AN=52;BaseQRankSum=11.056;DP=681;FS=3.216;HRun=0;HaplotypeScore=164.0230;InbreedingCoeff=0.4538;MQ=43.25;MQ0=26;MQRankSum=-3.400;QD=5.00;ReadPosRankSum=-5.239;VQSLOD=1.7926;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:35:69.92:70,0,683	0/0:3,4:7:8.55:0,9,111	./.	./.	0/0:31,0:27:48.97:0,49,873	1/1:24,1:21:14.95:150,15,0	1/1:29,2:28:17.85:156,18,0	0/1:42,5:39:99:116,0,795	0/0:17,0:16:3.42:0,3,704	0/0:36,0:32:40.23:0,40,1241	0/0:19,0:17:30.10:0,30,570	0/0:29,0:28:57.16:0,57,1063	0/0:16,0:16:21.36:0,21,547	0/0:15,0:15:27.07:0,27,501	0/0:38,0:36:21.02:0,21,346	0/0:25,0:24:4.43:0,4,928	0/1:17,3:18:96.50:96,0,503	0/0:20,0:19:50.94:0,51,832	0/1:27,2:21:99:291,0,325	1/1:26,1:23:12.42:124,12,0	1/1:14,1:14:8.48:56,8,0	0/0:26,0:24:8.46:0,8,554	0/0:27,0:26:5.12:0,5,788	0/0:48,0:48:73.65:0,74,1432	0/0:14,0:13:26.62:0,27,520	0/1:37,2:37:99:354,0,336	1/1:22,1:19:25.47:215,25,0	1/1:8,0:5:10.60:71,11,0
chr10	90147638	.	GAC	G	221.73	PASS	AB=0.952;AC=14;AF=0.269;AN=52;BaseQRankSum=9.464;DP=686;FS=3.466;HRun=0;HaplotypeScore=176.3456;InbreedingCoeff=-0.0871;MQ=42.78;MQ0=26;MQRankSum=-3.527;QD=0.70;ReadPosRankSum=-4.641;VQSLOD=1.1968;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:34:31.15:0,31,744	0/0:7,0:7:0.09:0,0,8	./.	./.	0/0:26,5:27:42.94:0,43,773	0/1:25,0:21:1.19:22,0,1	0/1:28,1:26:27.64:28,0,41	0/0:47,0:40:39.96:0,40,1420	0/1:16,1:16:8.67:9,0,707	0/1:36,2:34:6.17:6,0,1232	0/0:18,3:19:29.97:0,30,502	0/0:23,5:27:54.14:0,54,991	0/1:13,2:15:11.30:11,0,457	0/0:12,3:15:24.06:0,24,463	0/0:39,0:37:18:0,18,188	0/1:20,5:24:9.28:9,0,878	0/0:20,0:18:21.60:0,22,429	0/0:22,0:21:51.16:0,51,886	0/1:28,0:21:12.06:12,0,440	0/1:25,0:21:4.61:5,0,17	1/1:13,1:13:5.23:43,5,0	0/0:23,6:27:5.32:0,5,550	0/1:22,4:24:2.14:2,0,723	0/0:44,3:47:67.25:0,67,1316	0/0:12,3:14:26.62:0,27,494	0/1:43,0:41:99:131,0,511	0/1:25,0:21:27.41:27,0,53	0/1:8,0:5:7.08:57,0,7
chr10	90147660	.	CAG	C	5369.54	PASS	AB=0.765;AC=31;AF=0.596;AN=52;BaseQRankSum=5.369;DP=667;FS=0.452;HRun=0;HaplotypeScore=160.1563;InbreedingCoeff=-0.1233;MQ=42.21;MQ0=23;MQRankSum=-6.175;QD=9.10;ReadPosRankSum=-4.204;VQSLOD=3.8905;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,10:26:80.67:81,0,480	0/1:4,0:4:0:0,0,0	./.	./.	0/1:15,14:25:46.53:47,0,332	1/1:4,22:22:12.04:160,12,0	1/1:3,25:25:11.95:160,12,0	1/1:19,40:50:99:1505,117,0	0/1:15,2:16:99:146,0,367	0/1:35,8:38:99:453,0,619	0/0:12,6:17:12.04:0,12,208	0/1:15,13:27:0.69:1,0,429	0/1:7,6:13:29.76:30,0,68	0/1:9,7:16:18.33:18,0,212	0/0:37,0:35:24.08:0,24,406	0/1:14,7:20:37.41:37,0,354	0/0:15,0:13:21.07:0,21,356	0/1:12,9:20:49.22:49,0,334	1/1:8,14:18:25.32:465,25,0	1/1:2,25:23:18.06:240,18,0	1/1:10,8:17:11.83:158,12,0	0/1:26,7:30:99:215,0,271	0/1:19,6:23:69.21:69,0,354	0/1:35,4:39:99:109,0,505	0/1:8,7:14:22.33:22,0,211	0/1:11,32:41:66.38:896,0,66	1/1:0,24:20:27.55:348,28,0	1/1:2,5:4:12.04:160,12,0
chr10	90148026	.	TG	T	6467.91	PASS	AB=0.798;AC=52;AF=0.929;AN=56;BaseQRankSum=-2.604;DP=510;FS=0.000;HRun=10;HaplotypeScore=69.7545;InbreedingCoeff=0.3910;MQ=75.45;MQ0=0;MQRankSum=-3.240;QD=12.83;ReadPosRankSum=2.626;VQSLOD=4.7569;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,16:22:21.17:318,21,0	1/1:0,6:6:12:104,12,0	0/1:15,0:14:0.15:0,0,155	0/0:6,0:6:3.01:0,3,30	1/1:2,10:14:34.06:272,34,0	1/1:2,0:13:18.33:54,18,0	1/1:2,0:21:38.70:114,39,0	1/1:6,0:13:4.47:18,4,0	1/1:5,24:30:74.02:631,74,0	1/1:3,10:14:2.92:188,3,0	1/1:3,6:9:20.96:177,21,0	1/1:7,13:20:26.95:234,27,0	0/1:8,17:25:15.38:340,0,15	1/1:2,21:23:50.99:443,51,0	1/1:1,16:17:35.99:313,36,0	1/1:2,14:16:41.99:365,42,0	1/1:4,31:37:94.05:793,94,0	1/1:3,23:27:40.85:572,41,0	1/1:3,0:9:9.09:26,9,0	1/1:1,0:11:12.21:36,12,0	1/1:10,0:49:69.25:203,69,0	1/1:4,5:9:14.99:130,15,0	1/1:4,11:15:32.99:286,33,0	1/1:5,13:18:35.99:312,36,0	1/1:1,12:13:32.99:286,33,0	1/1:8,0:28:38.69:113,39,0	1/1:2,1:21:37.50:128,37,0	1/1:2,0:8:4.06:12,4,0
chr10	90149817	.	TGA	T	588.83	PASS	AB=0.963;AC=25;AF=0.568;AN=44;BaseQRankSum=1.564;DP=466;FS=3.860;HRun=0;HaplotypeScore=69.3125;InbreedingCoeff=0.5069;MQ=62.04;MQ0=3;MQRankSum=0.059;QD=2.78;ReadPosRankSum=1.902;VQSLOD=1.4150;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:3.46:24,3,0	1/1:4,1:5:3.01:32,3,0	./.	./.	1/1:16,0:17:5.85:46,6,0	0/0:22,0:22:5.83:0,6,51	0/0:17,0:17:15.01:0,15,159	./.	1/1:12,4:16:6.01:64,6,0	0/0:16,0:16:0.89:0,1,2	./.	1/1:12,0:18:8.44:42,8,0	1/1:12,4:16:12.03:128,12,0	1/1:12,0:16:2.84:14,3,0	1/1:8,5:13:6.02:64,6,0	0/0:13,0:13:6.49:0,6,86	1/1:12,3:16:17.86:166,18,0	1/1:18,1:21:11.70:92,12,0	./.	0/0:29,0:29:3.01:0,3,40	1/1:8,0:8:2.84:14,3,0	1/1:21,0:22:5.83:40,6,0	0/0:14,0:14:2.99:0,3,24	0/1:15,1:26:11.05:11,0,166	./.	0/0:16,0:15:11.99:0,12,133	0/0:23,0:22:3.01:0,3,41	0/0:8,0:8:5.99:0,6,48
chr10	90150000	.	CTCTGTCTCTG	C	3716.15	PASS	AB=0.912;AC=34;AF=0.680;AN=50;BaseQRankSum=-4.867;DP=579;FS=8.864;HRun=0;HaplotypeScore=147.7142;InbreedingCoeff=-0.0303;MQ=54.63;MQ0=12;MQRankSum=-2.578;QD=7.49;ReadPosRankSum=-4.174;VQSLOD=0.5594;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,33:42:1.51:3,2,0	0/1:13,0:13:6.26:6,0,95	./.	0/0:9,0:8:6.02:0,6,107	./.	0/1:30,0:30:99:149,0,388	1/1:28,0:26:8.03:106,8,0	1/1:34,0:29:69.06:941,69,0	1/1:1,19:20:3.01:91,3,0	1/1:2,16:18:36.12:840,36,0	1/1:1,18:19:2.99:95,3,0	0/1:6,28:34:0.01:0,0,0	1/1:3,17:20:2.84:14,3,0	1/1:3,22:25:3.48:95,3,0	0/0:17,0:17:5.99:0,6,50	1/1:0,21:21:2.58:90,3,0	0/0:22,0:22:3.41:0,3,19	1/1:1,19:20:0.47:1,0,0	0/1:13,0:13:13.20:200,0,13	0/1:17,0:17:99:113,0,174	0/1:25,0:24:99:235,0,131	0/1:4,13:17:0:0,0,0	1/1:2,10:12:3.01:94,3,0	1/1:4,29:33:3.01:72,3,0	./.	0/1:16,0:15:99:276,0,187	0/1:29,0:27:99:261,0,303	0/1:10,0:10:33.24:33,0,290
chr10	90150002	.	CTG	C	524.72	PASS	AB=0.920;AC=15;AF=0.288;AN=52;BaseQRankSum=2.285;DP=566;FS=6.370;HRun=0;HaplotypeScore=123.9481;InbreedingCoeff=-0.1817;MQ=53.53;MQ0=11;MQRankSum=-3.217;QD=1.90;ReadPosRankSum=1.083;VQSLOD=1.8196;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:6:0,6,79	0/0:13,0:13:11.89:0,12,207	0/0:8,0:3:2.86:0,3,26	0/0:7,0:6:11.81:0,12,144	./.	0/1:26,3:29:12.17:12,0,292	0/0:20,8:26:15.04:0,15,193	0/1:22,12:29:99:186,0,377	0/1:20,0:20:1.22:1,0,19	0/1:17,0:17:10.35:10,0,68	1/1:19,0:19:2.60:10,3,0	0/0:31,0:31:2.98:0,3,24	0/0:19,0:19:5.95:0,6,43	0/1:24,0:24:4:4,0,19	0/0:17,0:17:9.03:0,9,165	1/1:21,0:21:1.93:6,2,0	0/0:23,0:23:8.99:0,9,103	0/0:20,0:20:3.01:0,3,44	0/1:13,1:14:85.64:94,0,86	0/1:15,2:17:23.94:24,0,179	0/1:23,2:24:99:179,0,125	0/0:17,0:17:9.02:0,9,121	0/1:11,0:11:3.54:4,0,18	0/0:33,0:32:8.50:0,8,81	./.	0/1:13,3:15:2.30:2,0,330	0/1:25,4:27:99:121,0,185	0/0:8,1:9:1.37:0,1,231
chr10	90150004	.	G	GTC	4385.25	PASS	AB=1.000;AC=33;AF=0.688;AN=48;BaseQRankSum=0.363;DP=570;FS=15.792;HRun=0;HaplotypeScore=115.0356;InbreedingCoeff=0.4067;MQ=53.25;MQ0=10;MQRankSum=0.685;QD=11.07;ReadPosRankSum=0.677;VQSLOD=3.8531;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:2.87:0,3,21	0/1:13,0:13:10:10,0,57	./.	0/0:6,0:5:6.02:0,6,79	./.	1/1:9,22:31:27.09:454,27,0	1/1:12,17:27:6.02:102,6,0	1/1:37,0:33:71.75:893,72,0	1/1:20,0:20:2.84:14,3,0	0/1:16,0:16:26.38:115,0,26	0/0:19,0:19:2.37:0,2,8	0/1:31,0:31:0:0,0,0	1/1:19,0:19:2.84:14,3,0	1/1:23,0:23:2.78:39,3,0	0/0:17,0:17:5.99:0,6,50	1/1:21,0:21:2.80:13,3,0	0/0:25,0:25:3.01:0,3,36	0/0:20,0:20:3:0,3,25	1/1:9,4:13:23.88:314,24,0	1/1:7,11:18:18.06:289,18,0	1/1:4,21:24:39.13:653,39,0	./.	1/1:11,0:11:3.01:42,3,0	1/1:33,0:32:2.92:17,3,0	./.	1/1:7,7:14:26.91:422,27,0	1/1:7,24:30:45.15:741,45,0	1/1:4,5:9:15.05:252,15,0
chr10	90150006	.	CTCTG	C	3157.25	PASS	AB=0.993;AC=34;AF=0.739;AN=46;BaseQRankSum=-4.110;DP=571;FS=6.103;HRun=0;HaplotypeScore=126.7735;InbreedingCoeff=-0.0253;MQ=53.01;MQ0=10;MQRankSum=-2.988;QD=6.83;ReadPosRankSum=-5.567;VQSLOD=0.0252;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:2.99:0,3,24	1/1:3,10:13:8.71:61,9,0	./.	0/0:7,0:6:5.98:0,6,48	./.	0/1:31,0:31:77.83:78,0,109	1/1:29,0:27:2.33:16,2,0	1/1:25,16:37:84.45:1093,84,0	1/1:20,0:20:3.01:49,3,0	1/1:16,0:16:36.04:483,36,0	1/1:19,0:19:3.01:38,3,0	1/1:30,0:30:3.01:35,3,0	./.	1/1:23,0:23:2.94:41,3,0	0/1:17,1:18:0:0,0,0	1/1:21,0:21:2.80:49,3,0	0/1:24,0:24:0:0,0,0	1/1:20,0:20:1.82:5,2,0	1/1:11,0:11:11.70:179,12,0	0/1:22,0:22:55.09:97,0,55	0/1:25,0:24:12.91:394,0,13	./.	1/1:10,0:10:3.01:43,3,0	1/1:31,0:30:3.01:51,3,0	./.	0/1:16,0:15:24.26:193,0,24	0/1:33,0:31:60.31:343,0,60	0/1:9,0:9:33.30:33,0,97
chr10	90150008	.	CTG	C	1363.22	PASS	AB=0.900;AC=33;AF=0.688;AN=48;BaseQRankSum=-0.696;DP=549;FS=0.951;HRun=0;HaplotypeScore=123.8133;InbreedingCoeff=0.4633;MQ=52.91;MQ0=10;MQRankSum=-2.924;QD=3.73;ReadPosRankSum=-3.211;VQSLOD=2.0550;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:2.97:0,3,20	0/0:13,0:13:12.99:0,13,108	./.	0/0:5,0:4:6.02:0,6,114	./.	1/1:29,3:32:4.57:82,5,0	0/0:21,7:26:2.88:0,3,7	1/1:26,12:34:68.30:472,68,0	1/1:19,0:19:2.80:13,3,0	1/1:16,0:16:33.20:167,33,0	1/1:19,0:19:2.88:15,3,0	1/1:30,0:30:2.94:18,3,0	1/1:17,1:18:2.84:14,3,0	1/1:23,0:23:2.84:16,3,0	0/0:18,0:18:5.99:0,6,50	1/1:21,0:21:2.69:13,3,0	0/0:22,0:22:3.01:0,3,36	0/0:20,0:20:1.55:0,2,4	1/1:9,1:10:12.93:104,13,0	1/1:17,2:19:5.79:64,6,0	1/1:22,2:23:19.54:208,20,0	./.	1/1:10,0:10:2.92:17,3,0	1/1:30,0:29:2.60:10,3,0	./.	1/1:13,3:15:14.70:110,15,0	1/1:27,4:29:19.39:166,19,0	0/1:8,1:9:5.09:14,0,5
chr10	90150010	.	G	GTCTCTGTC	3894.80	PASS	AB=0.885;AC=38;AF=0.826;AN=46;BaseQRankSum=-5.363;DP=556;FS=4.635;HRun=0;HaplotypeScore=136.2892;InbreedingCoeff=0.1149;MQ=52.86;MQ0=9;MQRankSum=-1.479;QD=8.52;ReadPosRankSum=-5.200;VQSLOD=0.3655;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:0.99:0,1,3	1/1:12,0:13:8.84:160,9,0	./.	0/0:4,0:4:5.99:0,6,64	./.	0/1:31,0:31:13.83:107,0,14	1/1:27,0:25:4.29:21,4,0	1/1:38,0:34:92.95:1165,93,0	1/1:19,0:19:3.01:49,3,0	0/1:16,0:16:76.95:352,0,77	1/1:20,0:20:3:26,3,0	1/1:30,0:30:2.93:35,3,0	./.	1/1:23,0:23:2.99:40,3,0	0/1:3,16:20:0:0,0,0	1/1:22,0:22:3.01:49,3,0	1/1:3,18:24:3.48:110,3,0	1/1:20,0:20:0.89:2,1,0	1/1:11,0:11:22.08:288,22,0	1/1:23,0:23:6.10:178,6,0	1/1:24,0:23:26.21:448,26,0	./.	1/1:11,0:11:3.01:41,3,0	1/1:31,0:30:3.01:51,3,0	./.	1/1:15,0:14:17.28:278,17,0	1/1:33,0:31:18.46:458,18,0	0/1:6,0:6:20.46:36,0,20
chr10	90150914	.	GTGTGTGTGACTC	G	6185.21	PASS	AB=0.991;AC=43;AF=0.768;AN=56;BaseQRankSum=1.845;DP=643;FS=31.865;HRun=0;HaplotypeScore=217.9448;InbreedingCoeff=0.2956;MQ=42.86;MQ0=35;MQRankSum=0.176;QD=14.35;ReadPosRankSum=3.187;VQSLOD=2.3977;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:14:2.09:19,2,0	1/1:8,0:8:11.24:90,11,0	0/0:78,0:18:27.13:0,27,622	0/0:97,0:23:24.82:0,25,1215	0/0:19,0:20:1.46:0,1,10	0/1:13,0:13:4.08:14,0,4	0/1:24,0:24:8.93:29,0,9	1/1:18,0:16:20.56:338,21,0	1/1:17,0:17:16.69:194,17,0	0/1:17,0:16:99:814,0,210	1/1:12,0:11:1.07:16,1,0	1/1:17,0:18:37.03:565,37,0	1/1:13,0:13:27.06:527,27,0	0/1:20,0:21:1.59:270,0,2	1/1:21,0:20:2.74:13,3,0	1/1:21,0:22:23.65:645,24,0	1/1:21,0:20:6.82:108,7,0	0/1:11,0:11:35.71:690,0,36	1/1:16,0:15:13.89:395,14,0	1/1:28,0:28:6.70:38,7,0	1/1:31,0:30:0.76:35,1,0	1/1:18,0:20:16.17:232,16,0	1/1:9,9:18:8.98:86,9,0	0/0:17,0:16:7.07:0,7,25	1/1:9,0:9:5.24:40,5,0	1/1:32,0:31:70.25:820,70,0	1/1:19,0:18:14.84:181,15,0	1/1:5,0:5:3:27,3,0
chr10	90150916	.	GTGTGTGACTCT	G	4022.25	PASS	AB=0.894;AC=34;AF=0.607;AN=56;BaseQRankSum=5.551;DP=640;FS=4.968;HRun=0;HaplotypeScore=218.6606;InbreedingCoeff=-0.0884;MQ=42.68;MQ0=36;MQRankSum=-3.152;QD=9.38;ReadPosRankSum=4.179;VQSLOD=2.1865;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,2:14:6.91:18,0,7	1/1:7,0:7:10.66:45,11,0	0/0:76,0:17:39.21:0,39,981	0/0:98,0:24:50.99:0,51,1856	0/0:16,4:20:10.01:0,10,49	0/1:11,0:13:7.51:13,0,8	0/1:22,0:22:14.45:14,0,69	0/1:17,0:15:66.92:67,0,173	0/1:14,3:17:7.31:186,0,7	0/1:12,5:16:99:650,0,342	1/1:10,2:11:1.13:17,1,0	1/1:10,8:18:26.81:438,27,0	0/1:10,3:13:11.50:327,0,12	1/1:15,7:22:2.70:253,3,0	1/1:21,0:21:2.60:10,3,0	1/1:17,7:23:25.27:554,25,0	1/1:5,0:19:3.84:97,4,0	0/1:5,5:10:73.78:540,0,74	0/1:15,0:14:70.95:71,0,99	0/1:27,0:28:5.62:6,0,8	0/1:34,0:33:11.18:11,0,27	1/1:14,5:19:4.11:141,4,0	0/1:14,4:17:0.03:80,0,0	0/0:14,3:16:12.74:0,13,65	1/1:5,4:9:7.38:80,7,0	0/1:30,0:30:48.66:307,0,49	0/1:18,0:19:11.65:88,0,12	1/1:6,0:6:2.60:10,3,0
chr10	90150918	.	GTGTGACTC	G	6987.57	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=2.481;DP=628;FS=37.084;HRun=0;HaplotypeScore=191.1095;InbreedingCoeff=0.3505;MQ=41.33;MQ0=36;MQRankSum=-0.380;QD=16.68;ReadPosRankSum=2.291;VQSLOD=2.6358;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:12:4.21:15,0,4	1/1:0,7:7:12.04:304,12,0	0/0:74,0:16:26.64:0,27,581	0/0:99,0:23:27.86:0,28,1136	0/0:20,0:20:2.74:0,3,12	1/1:5,8:13:1.69:36,2,0	1/1:5,14:19:7.72:122,8,0	1/1:13,0:11:23.57:391,24,0	1/1:16,0:16:24.10:176,24,0	0/1:17,0:16:99:544,0,174	1/1:12,0:11:1.23:17,1,0	1/1:18,0:18:20:259,20,0	1/1:14,0:14:0.10:358,0,0	1/1:21,0:21:7.65:192,8,0	1/1:2,21:22:3.01:84,3,0	1/1:24,0:23:30.76:441,31,0	1/1:19,1:19:8.01:205,8,0	0/1:10,0:10:44.62:390,0,45	1/1:4,10:14:33.08:555,33,0	1/1:5,23:28:5.86:134,6,0	1/1:36,0:35:2.32:64,2,0	1/1:18,0:18:14.04:112,14,0	1/1:17,0:16:8.98:87,9,0	0/0:16,0:15:5.71:0,6,19	1/1:9,0:9:6.39:40,6,0	1/1:5,26:30:78.23:1710,78,0	1/1:3,17:19:26.87:667,27,0	1/1:1,5:6:3.01:83,3,0
chr10	90150920	.	GTGACTC	G	6049.04	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=2.386;DP=614;FS=51.659;HRun=0;HaplotypeScore=183.5194;InbreedingCoeff=0.2072;MQ=38.94;MQ0=35;MQRankSum=-0.585;QD=13.91;ReadPosRankSum=2.193;VQSLOD=2.6520;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:12:4.24:23,4,0	1/1:7,0:7:12.04:205,12,0	0/0:68,0:13:26.76:0,27,565	0/0:95,0:22:27.90:0,28,1071	0/1:20,0:20:6.33:14,0,6	1/1:13,0:13:1.58:37,2,0	1/1:16,1:17:4.83:120,5,0	1/1:13,0:11:26.54:411,27,0	1/1:16,0:16:20.30:188,20,0	0/1:17,0:16:99:500,0,168	1/1:12,0:11:1:17,1,0	1/1:18,0:18:11.84:247,12,0	0/1:14,0:14:14.68:332,0,15	0/1:21,0:21:39.98:154,0,40	1/1:22,0:21:3.01:51,3,0	1/1:24,0:23:26.81:351,27,0	1/1:20,0:19:9.29:147,9,0	0/1:10,0:10:69.15:342,0,69	1/1:13,1:14:33.09:564,33,0	1/1:27,1:28:5.85:102,6,0	1/1:34,0:33:3.09:66,3,0	1/1:19,0:19:14.35:111,14,0	1/1:17,0:16:8.98:87,9,0	0/0:15,0:14:4.02:0,4,15	1/1:9,0:9:5.93:40,6,0	1/1:31,0:30:78.20:1436,78,0	1/1:19,1:19:26.93:454,27,0	1/1:6,0:6:3.01:52,3,0
chr10	90150922	.	GACTC	G	5391.97	PASS	AB=0.798;AC=44;AF=0.786;AN=56;BaseQRankSum=2.184;DP=583;FS=40.806;HRun=0;HaplotypeScore=171.2109;InbreedingCoeff=0.1689;MQ=39.11;MQ0=37;MQRankSum=-1.383;QD=13.12;ReadPosRankSum=1.926;VQSLOD=2.7184;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,10:11:0.62:16,1,0	1/1:7,0:7:12.04:163,12,0	0/0:66,0:11:26.31:0,26,540	0/0:90,2:21:27.87:0,28,978	0/1:7,10:17:6.60:14,0,7	1/1:12,0:13:2.02:39,2,0	0/1:16,0:17:2.71:76,0,3	1/1:1,10:9:26.54:412,27,0	1/1:9,6:15:22.57:178,23,0	0/1:13,4:16:99:413,0,162	1/1:3,7:9:2.97:20,3,0	1/1:11,4:16:10.77:245,11,0	0/1:9,4:13:36.35:318,0,36	0/1:12,7:19:44.26:130,0,44	1/1:22,0:21:3.01:37,3,0	1/1:13,10:23:24.87:288,25,0	1/1:18,2:19:9.61:133,10,0	0/1:9,1:10:60.11:255,0,60	1/1:11,0:11:33.08:547,33,0	1/1:26,2:28:5.81:96,6,0	1/1:2,30:32:2.57:66,3,0	1/1:7,10:17:14.89:112,15,0	1/1:16,0:15:8.98:86,9,0	0/0:8,5:12:2.73:0,3,13	1/1:5,5:10:5.88:40,6,0	1/1:27,1:29:78.23:1306,78,0	1/1:21,0:19:26.97:357,27,0	1/1:5,0:5:3.01:46,3,0
chr10	90151006	.	TTCTCTCTC	T	2257.20	PASS	AB=1.000;AC=29;AF=0.537;AN=54;BaseQRankSum=0.674;DP=569;FS=43.590;HRun=0;HaplotypeScore=159.4213;InbreedingCoeff=0.2262;MQ=54.79;MQ0=44;MQRankSum=2.116;QD=7.60;ReadPosRankSum=1.010;VQSLOD=1.4654;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:21.06:362,21,0	0/0:3,0:2:3.01:0,3,73	0/0:52,0:16:0:0,0,0	0/0:66,0:12:0.89:0,1,2	1/1:10,0:12:17.84:360,18,0	0/1:24,0:23:12.61:13,0,626	0/1:29,0:23:51.65:52,0,223	0/0:30,0:24:18.04:0,18,287	1/1:10,1:11:15.05:351,15,0	1/1:10,5:14:15.04:285,15,0	1/1:7,1:8:3.01:75,3,0	0/0:12,0:11:3.94:0,4,11	1/1:11,0:11:9.02:112,9,0	1/1:8,0:8:9:145,9,0	0/0:23,0:21:18.06:0,18,389	1/1:9,0:10:12.04:264,12,0	0/0:17,0:15:24.08:0,24,710	1/1:5,0:11:2.22:7,2,0	0/1:17,0:10:99:102,0,150	0/1:31,0:31:19.50:20,0,817	0/0:47,0:42:33.11:0,33,1047	1/1:5,3:8:2.69:65,3,0	0/0:3,6:9:0:0,0,0	1/1:16,0:15:3.91:23,4,0	./.	0/1:25,0:24:99:131,0,730	0/1:24,0:23:34.24:34,0,828	0/1:12,0:10:22.82:23,0,270
chr10	90151046	.	C	CTG	1454.99	PASS	AC=38;AF=1.000;AN=38;DP=390;FS=0.000;HRun=0;HaplotypeScore=107.8822;InbreedingCoeff=-0.0647;MQ=39.84;MQ0=37;QD=4.45;VQSLOD=2.5118;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:13:5.03:23,5,0	1/1:4,4:7:5.05:52,5,0	./.	./.	1/1:12,0:11:3.45:23,3,0	1/1:21,0:19:5.68:47,6,0	1/1:23,0:19:17.86:135,18,0	./.	1/1:9,0:8:7.89:41,8,0	1/1:14,0:14:4.56:30,5,0	./.	./.	1/1:6,0:5:5.26:25,5,0	1/1:5,0:4:2.84:14,3,0	1/1:21,0:15:5.99:48,6,0	./.	1/1:24,0:22:25.82:197,26,0	1/1:11,0:8:3.01:44,3,0	1/1:22,0:12:9.80:64,10,0	1/1:25,0:25:11.13:71,11,0	1/1:36,0:35:40.80:303,41,0	./.	./.	1/1:10,0:10:2.99:24,3,0	./.	1/1:20,0:20:12.90:81,13,0	1/1:24,0:20:14.84:122,15,0	1/1:17,0:14:23.68:186,24,0
chr10	90151147	.	TGTGTGTGTGTG	T	233.25	PASS	AB=0.951;AC=18;AF=0.360;AN=50;BaseQRankSum=2.668;DP=186;FS=7.980;HRun=0;HaplotypeScore=49.8013;InbreedingCoeff=0.3453;MQ=41.00;MQ0=29;MQRankSum=0.443;QD=3.48;ReadPosRankSum=-0.724;VQSLOD=0.0296;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,1:6:0.13:0,0,0	0/1:2,1:3:7.15:76,0,7	0/0:13,0:4:12.03:0,12,148	0/0:21,0:8:3.36:0,3,58	./.	0/1:9,0:4:0:0,0,0	1/1:5,0:4:1.36:5,1,0	0/0:10,0:6:8.73:0,9,91	0/1:4,0:4:0:0,0,0	0/0:8,0:6:18.06:0,18,337	0/0:2,0:2:0.47:0,0,1	0/1:2,0:2:0:0,0,0	0/1:1,0:1:0:0,0,0	./.	0/1:5,1:6:1.68:2,0,26	0/1:3,0:1:0:0,0,0	0/0:10,0:8:8.34:0,8,59	0/0:8,0:7:0.81:0,1,34	0/0:12,0:2:2.01:0,2,37	0/0:3,0:3:0:0,0,0	0/1:12,0:8:0:0,0,0	1/1:4,0:3:3:27,3,0	./.	0/0:10,0:9:0.14:0,0,0	1/1:7,1:7:6.02:151,6,0	0/0:8,0:7:14.84:0,15,176	1/1:0,1:1:3.01:76,3,0	0/0:3,0:1:3.01:0,3,33
chr10	90151157	.	TGC	T	625.32	PASS	AB=1.000;AC=36;AF=0.783;AN=46;DP=159;FS=0.000;HRun=0;HaplotypeScore=33.2825;InbreedingCoeff=0.3807;MQ=33.15;MQ0=30;QD=4.89;VQSLOD=1.7102;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:6:0.34:1,0,0	1/1:3,0:3:5.94:45,6,0	./.	./.	./.	0/1:9,0:3:0:0,0,0	1/1:5,0:4:0.99:3,1,0	1/1:7,0:4:10.16:64,10,0	0/1:4,0:4:0:0,0,0	1/1:8,0:6:12.61:68,13,0	0/0:2,1:3:0:0,0,0	0/1:2,0:2:0:0,0,0	0/1:2,0:1:0:0,0,0	0/1:5,0:4:0:0,0,0	1/1:5,1:6:11.97:96,12,0	0/1:3,0:1:0:0,0,0	1/1:9,0:8:23.48:151,23,0	1/1:8,0:7:8.55:44,9,0	1/1:10,0:1:2.98:22,3,0	./.	0/0:13,0:8:0:0,0,0	1/1:3,0:3:1.82:5,2,0	./.	1/1:10,2:10:0.10:0,0,0	1/1:5,3:7:6.01:56,6,0	1/1:10,0:8:15.43:93,15,0	1/1:1,0:1:3:29,3,0	1/1:3,0:1:2.96:19,3,0
chr10	90151169	.	TGTGTGTGTGTGTGTGTGTGC	T	790.10	PASS	AB=1.000;AC=19;AF=0.432;AN=44;BaseQRankSum=1.770;DP=270;FS=11.235;HRun=0;HaplotypeScore=101.2727;InbreedingCoeff=0.1219;MQ=33.52;MQ0=35;MQRankSum=3.148;QD=6.22;ReadPosRankSum=0.200;VQSLOD=1.3167;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:11:13.55:19,0,14	1/1:3,0:3:3.01:149,3,0	./.	0/0:13,0:4:11.90:0,12,153	1/1:10,1:11:7.03:29,7,0	1/1:12,0:6:0.43:1,0,0	0/1:11,0:10:14.58:15,0,17	0/0:9,0:5:4.24:0,4,28	./.	0/1:13,0:11:99:104,0,220	1/1:8,1:8:2.29:47,2,0	./.	1/1:7,0:6:1.59:5,2,0	./.	./.	./.	0/0:7,0:7:2.58:0,3,12	0/1:13,0:12:8.93:29,0,9	0/0:10,0:1:1.55:0,2,4	0/0:7,0:7:2.90:0,3,11	0/0:17,0:13:3.85:0,4,23	1/1:13,0:12:3.01:63,3,0	0/0:6,0:6:0:0,0,0	0/0:17,2:17:1.81:0,2,4	1/1:11,2:12:4.50:302,5,0	0/0:12,0:10:4.55:0,5,30	0/1:7,0:7:29.62:153,0,30	0/0:5,0:3:8.06:0,8,143
chr10	90151181	.	TGTGTGTGC	T	1619.59	PASS	AB=1.000;AC=43;AF=0.827;AN=52;BaseQRankSum=-2.788;DP=340;FS=0.000;HRun=0;HaplotypeScore=96.3637;InbreedingCoeff=0.3169;MQ=40.16;MQ0=32;MQRankSum=2.750;QD=6.16;ReadPosRankSum=-1.491;VQSLOD=1.6278;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:14:11.09:80,11,0	1/1:5,0:5:3.01:67,3,0	1/1:12,0:2:2.60:19,3,0	0/0:24,0:7:6.41:0,6,59	1/1:14,0:14:21.28:172,21,0	1/1:12,0:8:6.46:50,6,0	1/1:13,0:11:13.46:90,13,0	1/1:9,0:6:11.68:83,12,0	./.	0/1:17,0:16:49.54:169,0,50	1/1:10,0:9:11.56:99,12,0	1/1:6,0:6:2.77:25,3,0	1/1:9,0:8:9.82:63,10,0	1/1:12,0:10:3:25,3,0	1/1:11,0:10:3:25,3,0	./.	1/1:13,0:13:7.75:47,8,0	1/1:16,0:15:30.11:196,30,0	1/1:10,0:1:1.25:3,1,0	1/1:11,0:11:8.86:74,9,0	1/1:16,0:12:3.78:22,4,0	1/1:15,1:15:2.97:20,3,0	0/0:6,0:6:0:0,0,0	0/0:19,2:19:0.24:0,0,1	1/1:13,1:14:14.38:211,14,0	1/1:11,0:10:9.41:69,9,0	1/1:8,0:8:12.16:123,12,0	0/0:5,0:4:3.40:0,3,18
chr10	90151187	.	TGC	T	2432.03	PASS	AB=1.000;AC=47;AF=0.904;AN=52;BaseQRankSum=-1.909;DP=330;FS=0.000;HRun=0;HaplotypeScore=84.2539;InbreedingCoeff=0.1889;MQ=46.78;MQ0=28;MQRankSum=3.384;QD=8.42;ReadPosRankSum=-0.597;VQSLOD=2.5688;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:15:17.81:142,18,0	1/1:4,0:4:3:26,3,0	1/1:19,0:4:5.61:50,6,0	0/1:30,0:12:22.53:45,0,23	1/1:13,0:13:26.94:222,27,0	1/1:12,0:8:8.99:74,9,0	1/1:12,0:10:20.33:143,20,0	1/1:10,0:7:20.92:174,21,0	1/1:13,0:13:3:25,3,0	1/1:14,0:14:36.52:295,37,0	1/1:9,0:8:14.95:125,15,0	1/1:6,0:6:5.99:50,6,0	1/1:9,0:8:15.34:110,15,0	1/1:8,0:7:3:25,3,0	1/1:10,0:9:3:25,3,0	./.	1/1:14,0:14:10.96:72,11,0	1/1:13,0:13:32.55:234,33,0	./.	1/1:12,0:12:19.36:151,19,0	1/1:11,1:10:8.46:68,8,0	1/1:3,12:14:1.82:5,2,0	0/0:0,4:4:0:0,0,0	0/0:19,0:17:0.23:0,0,0	1/1:16,0:16:20.67:179,21,0	1/1:8,0:7:14.94:124,15,0	1/1:9,0:9:14.65:102,15,0	1/1:5,0:4:8.87:57,9,0
chr10	90153461	.	C	CT	787.15	PASS	AB=0.794;AC=6;AF=0.107;AN=56;BaseQRankSum=-0.897;DP=417;FS=3.355;HRun=9;HaplotypeScore=47.6610;InbreedingCoeff=0.6638;MQ=72.56;MQ0=0;MQRankSum=-3.663;QD=14.85;ReadPosRankSum=-1.652;VQSLOD=3.1575;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:23.32:0,23,363	0/1:3,7:10:5:178,0,5	0/0:9,0:9:17.59:0,18,140	0/0:10,0:10:10.22:0,10,86	0/0:16,0:16:38.99:0,39,338	0/0:17,0:17:38.97:0,39,339	0/0:15,0:16:25.94:0,26,204	0/0:21,0:21:38.93:0,39,332	0/0:11,0:11:14.99:0,15,130	0/0:20,0:20:50.96:0,51,441	0/0:16,0:16:38.99:0,39,338	0/1:13,0:13:9.06:9,0,158	0/0:10,0:11:20.03:0,20,162	0/0:9,0:9:14.99:0,15,130	1/1:5,10:15:35.22:367,35,0	0/0:12,0:12:17.96:0,18,153	1/1:2,13:15:34.34:368,34,0	0/0:18,0:18:38.99:0,39,339	0/0:15,0:15:31.53:0,32,264	0/0:20,1:21:14.78:0,15,357	0/0:13,0:13:32.96:0,33,283	0/0:12,0:12:29.98:0,30,260	0/0:15,0:15:29.95:0,30,260	0/0:6,0:6:18:0,18,156	0/0:13,0:13:35.98:0,36,312	0/0:22,0:22:56.96:0,57,491	0/0:24,0:23:68.99:0,69,599	0/0:16,0:16:35.99:0,36,313
chr10	90153492	.	C	CA	1728.93	PASS	AB=0.801;AC=34;AF=0.607;AN=56;BaseQRankSum=0.539;DP=488;FS=4.494;HRun=15;HaplotypeScore=73.3294;InbreedingCoeff=0.4550;MQ=68.94;MQ0=1;MQRankSum=-2.019;QD=5.39;ReadPosRankSum=-4.340;VQSLOD=1.4199;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:8,16:25:6.69:149,7,0	1/1:6,0:8:14.33:74,14,0	0/0:13,0:9:1.77:0,2,6	0/0:8,0:5:2.93:0,3,20	1/1:8,13:21:31.60:243,32,0	0/0:13,0:16:24.53:0,25,137	0/0:13,1:17:1.40:0,1,100	0/1:14,1:17:5.72:6,0,76	1/1:2,10:12:8.99:76,9,0	0/1:14,5:20:14.45:77,0,14	1/1:9,6:17:3.57:103,4,0	0/1:10,8:18:9.14:31,0,9	1/1:5,7:13:5.84:39,6,0	1/1:3,11:15:6.07:67,6,0	1/1:21,0:23:40.29:222,40,0	1/1:3,11:14:5.99:51,6,0	1/1:21,0:23:26:142,26,0	1/1:5,19:24:20.06:183,20,0	0/1:8,3:12:22.82:36,0,23	0/0:24,0:29:25.60:0,26,144	0/0:12,2:18:0.44:0,0,87	1/1:10,1:12:8.13:89,8,0	1/1:5,9:15:14.04:135,14,0	1/1:4,9:14:2.22:45,2,0	1/1:13,3:17:6.65:141,7,0	0/0:20,0:23:22.64:0,23,124	0/0:26,0:26:20.51:0,21,128	0/0:13,0:14:10.49:0,10,59
chr10	90153608	.	G	GTT	3800.02	PASS	AB=0.618;AC=42;AF=0.750;AN=56;BaseQRankSum=-2.170;DP=603;FS=12.606;HRun=14;HaplotypeScore=77.5705;InbreedingCoeff=0.1539;MQ=71.67;MQ0=10;MQRankSum=-0.254;QD=7.79;ReadPosRankSum=0.157;VQSLOD=-0.0517;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:9,1:38:21.03:136,0,21	1/1:4,0:4:5.36:32,5,0	0/0:56,0:16:11.61:0,12,113	0/0:41,0:16:5.25:0,5,16	1/1:8,1:28:19.02:205,19,0	1/1:4,13:21:31.19:329,31,0	1/1:5,7:12:9.87:208,10,0	1/1:11,8:21:29.43:334,29,0	1/1:6,1:20:8.32:51,8,0	1/1:9,1:23:6.59:136,7,0	0/1:8,0:18:2.54:55,0,3	0/1:4,0:14:12.49:21,0,12	0/1:7,0:14:12.50:12,0,25	0/1:7,0:14:24.22:24,0,31	0/0:9,0:17:2.76:0,3,25	1/1:6,0:19:14.35:51,14,0	0/1:8,0:35:27.67:100,0,28	0/1:9,0:22:27.59:36,0,28	1/1:10,9:20:30.03:325,30,0	1/1:3,11:18:37.09:350,37,0	1/1:6,6:12:12.04:157,12,0	0/1:7,0:17:3.09:48,0,3	1/1:2,2:21:40.29:211,40,0	1/1:5,0:12:14.85:65,15,0	1/1:4,1:23:22.60:122,23,0	1/1:6,14:23:41.28:390,41,0	1/1:8,11:21:11.73:127,12,0	1/1:1,13:17:23.43:273,23,0
chr10	90156500	.	T	TA	1383.51	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.645;DP=427;FS=8.027;HRun=1;HaplotypeScore=46.8236;InbreedingCoeff=0.9947;MQ=84.15;MQ0=0;MQRankSum=-2.579;QD=36.41;ReadPosRankSum=2.288;VQSLOD=3.3631;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1262	1/1:0,6:6:18.06:260,18,0	0/0:21,0:21:57.16:0,57,692	0/0:12,0:12:25.30:0,25,295	0/0:12,0:12:36.12:0,36,467	0/0:9,0:9:27.08:0,27,338	0/0:21,0:21:63.18:0,63,791	0/0:25,0:25:69.20:0,69,860	0/0:18,0:18:51.15:0,51,646	0/0:12,0:12:36.12:0,36,467	0/0:14,0:14:42.14:0,42,545	0/0:9,0:9:27.09:0,27,350	0/0:14,0:14:39.13:0,39,506	0/0:11,0:11:33.11:0,33,428	1/1:0,15:15:45.15:655,45,0	0/0:13,0:13:39.13:0,39,506	1/1:2,15:17:42.14:610,42,0	0/0:12,0:12:36.12:0,36,466	0/0:15,0:15:45.15:0,45,584	0/0:18,0:18:51.15:0,51,636	0/0:11,0:11:33.11:0,33,428	0/0:15,0:15:42.13:0,42,534	0/0:18,0:18:51.15:0,51,648	0/0:13,0:13:39.09:0,39,488	0/0:8,0:8:24.08:0,24,312	0/0:22,0:22:60.18:0,60,765	0/0:20,0:20:57.15:0,57,709	0/0:13,0:13:39.13:0,39,506
chr10	90156807	.	CA	C	13694.40	PASS	AC=54;AF=0.964;AN=56;BaseQRankSum=-3.386;DP=547;FS=5.003;HRun=6;HaplotypeScore=55.9720;InbreedingCoeff=0.5584;MQ=68.25;MQ0=1;MQRankSum=-1.716;QD=25.64;ReadPosRankSum=2.964;VQSLOD=5.1274;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:31:66.17:709,66,0	1/1:1,6:7:15.04:161,15,0	1/1:7,1:6:2.97:21,3,0	0/0:13,0:11:1.03:0,1,85	1/1:3,23:26:66.10:694,66,0	1/1:0,21:21:51.13:548,51,0	1/1:3,14:17:30.07:322,30,0	1/1:0,21:21:63.09:640,63,0	1/1:1,17:18:42.11:451,42,0	1/1:5,23:28:69.13:717,69,0	1/1:1,17:18:48.08:502,48,0	1/1:0,17:17:42.11:451,42,0	1/1:1,6:7:18.04:193,18,0	1/1:2,19:21:51.12:543,51,0	1/1:0,9:9:21.05:225,21,0	1/1:1,20:21:48:516,48,0	1/1:1,28:29:66.17:709,66,0	1/1:2,43:45:99:1160,108,0	1/1:2,18:20:54.06:545,54,0	1/1:0,23:23:66:667,66,0	1/1:1,8:9:21.05:226,21,0	1/1:0,17:17:48.12:516,48,0	1/1:4,19:23:48.12:516,48,0	1/1:1,20:21:57.14:612,57,0	1/1:1,14:15:36.09:387,36,0	1/1:2,25:27:72.15:764,72,0	1/1:0,24:24:51.13:548,51,0	1/1:0,11:11:33.08:352,33,0
chr10	90157949	.	A	ATTT	4799.83	PASS	AB=0.739;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.438;DP=558;FS=3.921;HRun=15;HaplotypeScore=93.9429;InbreedingCoeff=0.2885;MQ=65.76;MQ0=3;MQRankSum=-1.306;QD=9.27;ReadPosRankSum=-0.092;VQSLOD=1.8629;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,12:26:44.54:600,45,0	1/1:13,0:12:2.97:21,3,0	0/0:39,0:20:7.16:0,7,81	0/1:46,0:23:0.17:0,0,69	1/1:4,1:25:13.85:293,14,0	1/1:7,2:16:12.75:118,13,0	1/1:6,0:14:13.20:94,13,0	1/1:12,0:25:30.90:195,31,0	1/1:8,1:21:22.21:202,22,0	1/1:14,11:25:42.06:569,42,0	1/1:8,9:19:31.72:348,32,0	1/1:3,0:9:4.26:39,4,0	1/1:4,0:7:2.99:23,3,0	1/1:7,0:14:11.98:119,12,0	1/1:19,0:19:12.04:173,12,0	1/1:8,2:16:10.26:127,10,0	1/1:12,0:20:6:66,6,0	1/1:6,0:21:21.66:142,22,0	1/1:12,0:17:11.98:110,12,0	1/1:9,1:18:20.88:176,21,0	1/1:2,0:5:5.98:45,6,0	1/1:3,0:9:16.23:158,16,0	0/1:5,0:10:28.26:28,0,72	1/1:3,1:12:17.44:159,17,0	1/1:14,11:27:22.32:349,22,0	1/1:16,9:34:39.07:305,39,0	1/1:10,1:28:23.43:192,23,0	0/1:4,1:16:10.23:147,0,10
chr10	90158467	.	T	TTTCC	7601.58	PASS	AB=0.649;AC=39;AF=0.750;AN=52;BaseQRankSum=2.246;DP=585;FS=5.008;HRun=0;HaplotypeScore=126.3081;InbreedingCoeff=0.8295;MQ=62.70;MQ0=4;MQRankSum=-5.139;QD=18.01;ReadPosRankSum=-1.769;VQSLOD=3.6140;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:51.15:0,51,752	0/0:9,0:9:18.06:0,18,273	./.	./.	1/1:20,0:26:25.62:380,26,0	0/0:18,0:18:30.09:0,30,436	0/0:22,0:22:18.06:0,18,261	1/1:25,0:23:3.01:39,3,0	1/1:4,0:9:12.04:207,12,0	1/1:26,0:27:33.41:429,33,0	1/1:20,0:21:35.81:406,36,0	1/1:16,0:17:12.50:175,12,0	1/1:16,0:20:38.47:532,38,0	1/1:18,0:20:24.03:362,24,0	0/0:21,0:21:30.10:0,30,447	1/1:21,0:23:18.06:300,18,0	0/0:32,0:32:44.94:0,45,691	1/1:9,0:9:6:76,6,0	0/1:11,13:24:3.93:836,0,4	1/1:9,11:21:29.99:598,30,0	1/1:22,6:27:21.07:432,21,0	1/1:18,0:21:18.05:284,18,0	1/1:12,1:19:8.15:106,8,0	1/1:13,0:15:9:126,9,0	1/1:18,0:19:15.01:207,15,0	1/1:13,11:27:39.11:794,39,0	1/1:12,11:23:27.56:613,28,0	1/1:14,13:27:30.10:701,30,0
chr10	90158541	.	C	CT	1976.58	PASS	AB=0.981;AC=32;AF=0.571;AN=56;BaseQRankSum=3.197;DP=573;FS=7.865;HRun=14;HaplotypeScore=92.8213;InbreedingCoeff=0.4200;MQ=54.65;MQ0=26;MQRankSum=-2.028;QD=5.02;ReadPosRankSum=0.100;VQSLOD=2.1553;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:33,1:33:22.98:272,23,0	0/0:11,0:11:12.47:0,12,68	0/1:42,0:10:0.05:0,0,1	0/0:53,0:11:3.92:0,4,30	1/1:27,1:29:40.32:300,40,0	0/1:12,0:12:0.72:1,0,90	0/0:14,0:13:17.94:0,18,137	0/1:24,1:25:21.86:22,0,77	0/1:7,1:8:20.63:43,0,21	1/1:23,0:23:21.13:120,21,0	1/1:26,0:26:7.88:195,8,0	1/1:18,1:17:29.74:170,30,0	1/1:21,1:21:26.39:156,26,0	1/1:15,0:15:19.21:146,19,0	0/1:17,0:15:10.68:11,0,52	1/1:16,0:16:30.35:189,30,0	0/0:33,0:32:37.75:0,38,202	1/1:8,0:8:13.11:67,13,0	0/0:34,0:34:14.43:0,14,179	0/0:19,1:21:1.50:0,2,179	0/0:6,0:4:2.15:0,2,17	1/1:8,1:9:15.69:112,16,0	1/1:13,2:15:4.30:103,4,0	1/1:9,1:9:16.90:107,17,0	0/1:23,0:23:5.02:132,0,5	0/1:22,0:22:12.82:13,0,155	0/1:19,0:18:1.45:1,0,105	0/0:6,0:6:7.60:0,8,55
chr10	90158556	.	CT	C	1264.93	PASS	AB=0.882;AC=23;AF=0.411;AN=56;BaseQRankSum=0.477;DP=517;FS=37.641;HRun=14;HaplotypeScore=73.7647;InbreedingCoeff=-0.0219;MQ=45.31;MQ0=32;MQRankSum=-0.615;QD=3.90;ReadPosRankSum=2.423;VQSLOD=-0.6914;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,5:26:38.98:129,0,39	0/1:6,2:10:2.88:63,0,3	0/0:21,0:2:1.55:0,2,4	0/0:30,0:3:1.25:0,1,3	0/1:28,5:34:1.07:221,0,1	0/0:12,0:12:1.09:0,1,156	0/0:12,0:11:14.99:0,15,132	0/0:21,0:21:11.93:0,12,130	1/1:10,1:10:4.59:43,5,0	1/1:14,7:22:3.55:139,4,0	1/1:22,4:26:7.74:102,8,0	0/1:18,2:16:13.63:14,0,31	1/1:18,5:22:3.13:147,3,0	0/1:10,3:13:25.15:49,0,25	1/1:10,8:16:2.90:23,3,0	0/1:11,2:13:24.61:70,0,25	0/1:12,21:32:4.57:154,0,5	0/1:9,0:9:21.37:61,0,21	0/0:21,1:21:2.15:0,2,122	0/0:20,1:19:2.39:0,2,151	0/0:7,0:5:0:0,0,0	0/1:9,0:9:1.57:58,0,2	0/1:15,0:15:1.20:72,0,1	0/1:11,0:10:2.80:3,0,35	0/1:18,4:21:20.90:53,0,21	0/0:27,0:27:44.52:0,45,405	0/0:18,0:16:25.78:0,26,222	0/1:5,0:4:10.59:11,0,25
chr10	90160258	.	GTTTTTTTGGTTT	G	2888.38	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-5.184;DP=623;FS=2.259;HRun=0;HaplotypeScore=254.8156;InbreedingCoeff=0.3866;MQ=64.81;MQ0=8;MQRankSum=-2.392;QD=19.92;ReadPosRankSum=-0.395;VQSLOD=2.7307;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:97.12:0,97,3224	1/1:7,2:9:24:412,24,0	0/0:50,0:23:49.72:0,50,1190	0/0:44,0:17:15.42:0,15,571	0/1:21,0:21:51.85:52,0,1334	0/0:20,0:20:60.17:0,60,1848	0/0:15,0:15:33.06:0,33,903	0/0:34,0:34:80.56:0,81,2449	0/0:24,0:24:1.08:0,1,1901	0/0:28,0:28:2.75:0,3,1950	0/1:18,0:18:29.78:30,0,1065	0/1:19,0:19:30.29:30,0,1691	0/0:13,0:13:6.37:0,6,1162	0/0:19,0:18:30.57:0,31,1418	1/1:7,12:19:51.12:1344,51,0	0/1:15,0:14:19.51:20,0,982	1/1:15,10:25:57:1159,57,0	0/0:16,0:16:38.89:0,39,1742	0/0:26,0:25:53.68:0,54,1343	0/0:24,0:24:66.65:0,67,2596	0/0:22,0:22:54.13:0,54,1642	0/0:18,0:18:21.29:0,21,1712	0/1:19,0:19:2.40:2,0,1579	0/0:21,0:21:16.63:0,17,1536	0/0:16,0:16:48.13:0,48,1745	0/0:18,0:18:50.99:0,51,1794	0/0:18,0:18:45.14:0,45,1896	0/0:12,0:12:24:0,24,658
chr10	90160265	.	TG	T	1146.64	PASS	AB=0.972;AC=18;AF=0.321;AN=56;BaseQRankSum=-2.198;DP=607;FS=4.282;HRun=2;HaplotypeScore=143.3807;InbreedingCoeff=-0.0208;MQ=63.35;MQ0=11;MQRankSum=-3.524;QD=4.12;ReadPosRankSum=-3.454;VQSLOD=-0.7283;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:36.12:0,36,225	1/1:8,0:8:23.45:172,23,0	0/0:62,1:26:16.70:0,17,409	0/0:47,0:16:10.45:0,10,177	0/1:25,0:25:55.31:85,0,55	0/0:20,0:20:16.45:0,16,105	0/0:13,0:13:9.26:0,9,81	0/0:26,0:27:39.75:0,40,224	0/1:25,0:25:26.07:26,0,98	0/1:20,1:21:25.23:86,0,25	0/1:19,0:19:27.87:59,0,28	0/1:16,0:16:40.48:42,0,40	0/1:12,0:12:12.94:13,0,39	0/0:14,0:13:21.01:0,21,79	1/1:16,1:17:48.54:290,49,0	0/1:12,0:11:23.85:24,0,39	1/1:24,0:24:52.35:336,52,0	0/1:17,3:20:57.55:83,0,58	0/0:23,0:22:11.48:0,11,119	0/1:27,0:27:15.75:16,0,49	0/0:19,0:19:18.59:0,19,106	0/1:16,1:17:23.27:23,0,51	0/1:16,1:18:37.08:37,0,66	0/1:17,0:17:30.55:31,0,45	0/0:15,0:16:17.55:0,18,63	0/0:19,0:19:13.10:0,13,81	0/0:17,1:18:2.55:0,3,62	0/0:10,0:10:11.32:0,11,83
chr10	90160266	.	GGT	G	1129.89	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=-1.906;DP=603;FS=2.015;HRun=0;HaplotypeScore=153.6474;InbreedingCoeff=0.3619;MQ=63.36;MQ0=11;MQRankSum=-2.271;QD=7.29;ReadPosRankSum=-3.767;VQSLOD=2.8270;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:95.98:0,96,703	1/1:8,0:8:23.86:204,24,0	0/0:64,0:26:49.79:0,50,679	0/0:48,0:16:11.95:0,12,256	0/1:24,0:24:69.65:70,0,258	0/0:20,0:20:56.48:0,56,393	0/0:13,0:13:32.72:0,33,242	0/0:27,0:27:56.78:0,57,547	0/0:24,0:24:12.20:0,12,362	0/1:20,0:20:3.54:4,0,224	0/1:18,0:19:37.37:37,0,193	0/1:16,0:16:30.80:31,0,201	0/0:11,0:12:6.39:0,6,172	0/0:14,0:13:30.15:0,30,222	1/1:16,1:17:50.50:427,50,0	0/1:12,0:11:16.89:17,0,152	1/1:17,5:22:53.64:495,54,0	0/0:20,0:20:34.64:0,35,286	0/0:24,0:23:42.61:0,43,364	0/0:28,0:28:62.81:0,63,519	0/0:19,0:19:55.86:0,56,386	0/0:16,0:16:20.25:0,20,258	0/1:17,0:17:11.25:11,0,249	0/0:16,0:17:12.91:0,13,223	0/0:16,0:16:37.20:0,37,273	0/0:19,0:19:53.06:0,53,345	0/0:17,0:17:48.09:0,48,363	0/0:10,0:10:12.68:0,13,157
chr10	90160267	.	GT	G	2574.25	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=2.285;DP=602;FS=9.459;HRun=10;HaplotypeScore=140.0408;InbreedingCoeff=0.9607;MQ=62.46;MQ0=11;MQRankSum=-3.069;QD=11.24;ReadPosRankSum=2.835;VQSLOD=1.7092;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,100,1079	1/1:8,0:8:6.81:22,7,0	0/0:62,1:25:32.99:0,33,318	0/0:47,1:16:7.22:0,7,116	0/0:23,0:23:55.37:0,55,531	1/1:18,2:20:50.16:361,50,0	1/1:10,2:12:23.72:172,24,0	1/1:22,6:28:37.32:393,37,0	0/0:23,0:23:60.16:0,60,658	0/0:19,0:19:29.46:0,29,495	0/0:19,0:19:43.84:0,44,395	0/0:15,0:15:39.10:0,39,423	0/0:12,0:12:32.92:0,33,343	0/0:14,0:13:36.02:0,36,374	1/1:17,0:17:26.96:81,27,0	0/0:10,0:9:27.07:0,27,297	1/1:22,0:22:20.25:58,20,0	0/0:20,0:20:10.07:0,10,448	1/1:24,0:24:41.71:333,42,0	1/1:25,4:29:10.82:378,11,0	1/1:18,1:19:38.46:318,38,0	0/0:16,0:16:36.08:0,36,454	0/0:17,0:17:43.92:0,44,434	0/0:17,0:17:41.88:0,42,430	0/0:16,0:16:46.94:0,47,501	1/1:20,0:20:39.51:327,40,0	1/1:17,1:18:41.49:252,41,0	1/1:11,0:11:16.79:105,17,0
chr10	90160276	.	T	TG	4388.22	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-4.857;DP=609;FS=17.608;HRun=0;HaplotypeScore=142.2229;InbreedingCoeff=0.9840;MQ=61.56;MQ0=13;MQRankSum=-0.333;QD=25.22;ReadPosRankSum=1.363;VQSLOD=3.6726;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,121,1130	0/0:9,0:9:23.17:0,23,152	0/0:64,0:23:37:0,37,460	0/0:46,0:14:8.74:0,9,152	0/0:25,0:25:59.64:0,60,591	1/1:12,7:19:41.49:469,41,0	1/1:6,4:10:19.88:226,20,0	1/1:12,11:23:11.99:576,12,0	0/0:21,0:21:60.14:0,60,706	0/0:22,0:22:41.93:0,42,670	0/0:16,0:16:36.62:0,37,396	0/0:14,0:14:42.12:0,42,505	0/0:12,0:12:30.09:0,30,380	0/0:19,0:18:48.10:0,48,535	0/0:16,0:16:44.65:0,45,232	0/0:14,0:13:39.07:0,39,433	0/0:25,0:25:66.87:0,67,414	0/0:21,0:21:60.01:0,60,617	1/1:8,14:21:51.41:554,51,0	1/1:15,15:30:69.60:753,70,0	1/1:9,8:17:32.49:365,32,0	0/0:15,0:15:45.13:0,45,532	0/0:15,0:15:38.63:0,39,456	0/0:16,0:16:37.35:0,37,457	0/0:18,0:18:45.20:0,45,592	1/1:10,11:21:45.40:495,45,0	1/1:6,14:20:59.92:692,60,0	1/1:8,4:12:29.99:258,30,0
chr10	90160278	.	G	GT	3081.26	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=1.926;DP=604;FS=7.307;HRun=10;HaplotypeScore=145.2457;InbreedingCoeff=0.9117;MQ=60.79;MQ0=13;MQRankSum=-1.250;QD=10.89;ReadPosRankSum=-1.361;VQSLOD=1.3721;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:27,21:48:59.77:950,60,0	0/0:9,0:9:20.82:0,21,162	0/1:62,0:22:18.64:19,0,73	0/0:44,0:13:8.48:0,8,56	0/0:26,0:26:38.66:0,39,472	1/1:19,0:19:37.28:236,37,0	1/1:10,0:10:14.74:95,15,0	1/1:22,0:23:47.49:284,47,0	0/0:21,0:21:46.01:0,46,372	0/0:22,0:22:53.65:0,54,452	0/0:14,0:14:30.66:0,31,248	0/0:13,0:13:36.72:0,37,302	0/0:12,0:12:25.67:0,26,201	0/0:18,0:17:43.79:0,44,352	0/0:16,0:16:27.87:0,28,193	0/0:15,0:14:35.48:0,35,277	0/0:25,0:25:47.61:0,48,367	0/0:19,0:20:52.28:0,52,414	1/1:19,0:19:42.78:259,43,0	1/1:30,1:31:73.73:458,74,0	1/1:17,0:17:30.87:190,31,0	0/0:14,0:14:35.42:0,35,287	0/0:16,0:16:38.90:0,39,320	0/0:17,0:17:39.27:0,39,314	0/0:18,0:18:33.19:0,33,300	1/1:21,0:21:44.80:287,45,0	1/1:19,0:20:54.88:370,55,0	1/1:8,0:12:27.14:154,27,0
chr10	90160316	.	AG	A	14212.35	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-3.380;DP=485;FS=4.961;HRun=4;HaplotypeScore=80.2923;InbreedingCoeff=0.5503;MQ=53.84;MQ0=13;MQRankSum=2.554;QD=30.96;ReadPosRankSum=1.500;VQSLOD=5.2996;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,35:39:93.22:1085,93,0	1/1:1,10:11:30.09:358,30,0	0/0:25,1:2:5.88:0,6,41	0/1:18,0:6:18.37:18,0,63	1/1:1,27:28:72.18:845,72,0	1/1:0,11:11:33.06:380,33,0	1/1:0,10:10:21.06:252,21,0	1/1:1,13:13:36.11:431,36,0	1/1:0,17:17:48.15:576,48,0	1/1:0,16:16:48.15:576,48,0	1/1:0,15:15:45.14:539,45,0	1/1:1,13:14:39.12:468,39,0	1/1:0,11:11:27.08:323,27,0	1/1:0,19:19:54.17:648,54,0	1/1:0,16:16:48.15:575,48,0	1/1:0,15:15:42.13:504,42,0	1/1:2,23:25:69.14:809,69,0	1/1:1,20:21:60.18:719,60,0	1/1:1,15:16:45.14:537,45,0	1/1:1,23:24:57.13:668,57,0	1/1:1,13:14:36.11:432,36,0	1/1:0,11:11:30.09:360,30,0	1/1:0,15:15:36.11:431,36,0	1/1:0,11:11:33.10:396,33,0	1/1:0,15:15:45.14:539,45,0	1/1:0,20:20:60.18:719,60,0	1/1:2,21:23:60.06:682,60,0	1/1:0,10:10:30.04:342,30,0
chr10	90162715	.	T	TG	126.98	PASS	AB=0.568;AC=5;AF=0.104;AN=48;BaseQRankSum=3.047;DP=485;FS=7.195;HRun=1;HaplotypeScore=74.6846;InbreedingCoeff=0.4527;MQ=25.93;MQ0=183;MQRankSum=-3.080;QD=2.54;ReadPosRankSum=3.857;VQSLOD=-0.6458;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:22:18.06:0,18,246	1/1:2,3:5:2.96:19,3,0	./.	./.	0/0:19,0:19:17.89:0,18,163	0/0:20,0:14:6.02:0,6,84	0/0:21,0:12:32.63:0,33,219	0/0:18,0:5:15.05:0,15,207	0/0:14,0:9:8.79:0,9,125	0/0:29,0:21:63.14:0,63,838	0/0:20,0:20:20.94:0,21,227	./.	0/0:10,0:6:6.02:0,6,84	0/0:16,0:10:8.99:0,9,104	1/1:6,18:19:25.50:149,25,0	0/0:17,0:10:9.03:0,9,126	0/1:5,16:10:21.47:71,0,21	0/0:18,0:3:6.02:0,6,84	0/0:9,0:7:21.07:0,21,291	0/0:14,0:14:35.74:0,36,306	./.	0/0:8,0:7:6.02:0,6,84	0/0:8,0:8:17.89:0,18,163	0/0:21,0:10:2.97:0,3,20	0/0:19,0:18:24.51:0,25,312	0/0:24,0:11:33.11:0,33,453	0/0:26,0:17:12:0,12,143	0/0:6,0:4:12.04:0,12,168
chr10	90162716	.	T	TG	128.76	PASS	AB=0.568;AC=5;AF=0.109;AN=46;BaseQRankSum=3.787;DP=488;FS=9.408;HRun=0;HaplotypeScore=74.9954;InbreedingCoeff=0.4554;MQ=25.74;MQ0=187;MQRankSum=-1.627;QD=2.58;ReadPosRankSum=3.560;VQSLOD=1.6015;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:21:18.05:0,18,231	1/1:2,3:5:2.96:19,3,0	./.	./.	0/0:18,0:18:14.92:0,15,143	0/0:20,0:14:8.99:0,9,99	0/0:21,0:12:2.95:0,3,20	0/0:18,0:5:15.05:0,15,208	0/0:14,0:9:8.79:0,9,125	0/0:29,0:21:60.18:0,60,820	0/0:20,0:20:29.84:0,30,287	./.	0/0:9,0:6:6.02:0,6,84	0/0:16,0:10:8.99:0,9,104	1/1:6,18:19:25.53:150,26,0	0/0:18,0:10:9.03:0,9,126	0/1:5,16:10:21.50:71,0,21	0/0:18,0:3:6.02:0,6,84	0/0:10,0:7:21.07:0,21,291	0/0:14,0:14:20.90:0,21,205	./.	0/0:8,0:7:6.02:0,6,84	0/0:9,0:9:14.92:0,15,143	./.	0/0:18,0:17:27.48:0,27,332	0/0:24,0:11:33.11:0,33,453	0/0:27,0:17:12:0,12,141	0/0:6,0:4:12.04:0,12,168
chr10	90162920	.	AT	A	1466.24	PASS	AB=0.651;AC=43;AF=0.768;AN=56;BaseQRankSum=-2.021;DP=485;FS=0.000;HRun=15;HaplotypeScore=58.8079;InbreedingCoeff=0.0259;MQ=45.93;MQ0=127;MQRankSum=0.223;QD=3.48;ReadPosRankSum=1.239;VQSLOD=-0.3519;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,1:26:28.89:82,29,0	1/1:0,0:6:12.22:35,12,0	0/1:38,3:9:0.22:0,0,7	0/0:49,0:9:5.91:0,6,39	0/1:9,12:19:0.21:80,0,0	1/1:4,8:7:5.84:38,6,0	0/0:6,7:7:1.25:0,1,3	1/1:11,7:3:8.82:55,9,0	1/1:1,2:1:2.96:19,3,0	1/1:2,11:10:17.64:115,18,0	1/1:4,12:18:15.89:100,16,0	1/1:5,6:7:2.95:19,3,0	1/1:2,3:5:4.51:23,5,0	1/1:4,8:6:5.91:38,6,0	1/1:3,1:15:19.24:66,19,0	1/1:5,8:9:8.77:58,9,0	0/1:10,3:15:4.68:55,0,5	1/1:1,0:12:14.26:41,14,0	0/1:4,4:5:5.03:59,0,5	1/1:4,10:15:10.29:176,10,0	1/1:2,3:2:2.93:19,3,0	1/1:2,9:11:16.82:102,17,0	0/1:6,5:10:11.52:62,0,12	0/1:2,10:12:15.83:33,0,16	0/1:4,10:14:11.94:62,0,12	0/1:7,12:12:2.44:126,0,2	0/1:13,17:21:26.94:95,0,27	1/1:1,4:6:5.91:38,6,0
chr10	90163586	.	G	GC	2082.73	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.134;DP=606;FS=0.000;HRun=0;HaplotypeScore=138.0374;InbreedingCoeff=0.9808;MQ=89.37;MQ0=0;MQRankSum=4.223;QD=31.09;ReadPosRankSum=2.572;VQSLOD=3.2830;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,99,1334	1/1:1,4:5:11.50:143,12,0	0/0:23,0:23:51.07:0,51,709	0/0:29,0:29:73.25:0,73,896	0/0:13,0:13:39.10:0,39,509	0/0:22,0:22:66.22:0,66,923	0/0:34,0:33:96.30:0,96,1318	0/0:26,0:26:69.23:0,69,956	0/0:16,0:16:42.10:0,42,564	0/0:28,0:28:78.22:0,78,1064	0/0:14,0:14:33.11:0,33,458	0/0:23,0:23:57.10:0,57,752	0/0:21,0:21:57.19:0,57,780	0/0:25,0:25:54.17:0,54,732	1/1:3,13:16:38.61:484,39,0	0/0:18,0:18:39.12:0,39,540	1/1:2,44:46:99:1595,132,0	0/0:17,0:17:33.11:0,33,452	0/0:16,0:16:48.16:0,48,671	0/0:18,0:18:54.18:0,54,754	0/0:36,0:36:99:0,105,1467	0/0:17,0:17:42.14:0,42,581	0/0:11,0:11:15.03:0,15,209	0/0:25,0:25:45.15:0,45,625	0/0:10,0:10:23.99:0,24,275	0/0:22,0:22:64.08:0,64,865	0/0:25,0:25:75.25:0,75,1044	0/0:11,0:11:33.11:0,33,458
chr10	90163621	.	GCCTGACTGC	G	15272.62	PASS	AB=0.944;AC=29;AF=0.518;AN=56;BaseQRankSum=10.033;DP=552;FS=0.000;HRun=0;HaplotypeScore=187.6139;InbreedingCoeff=0.8572;MQ=91.49;MQ0=0;MQRankSum=-17.347;QD=63.37;ReadPosRankSum=2.993;VQSLOD=4.3974;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:69.24:1989,69,0	0/0:4,0:4:12.04:0,12,440	0/0:30,0:30:83.44:0,83,3815	0/0:24,0:24:68.91:0,69,2591	1/1:1,6:7:3.01:97,3,0	0/0:14,0:14:42.14:0,42,2025	0/0:33,0:33:99:0,99,4600	0/0:20,0:20:60.11:0,60,2740	1/1:0,15:15:45.15:1383,45,0	1/1:0,21:21:60.17:1801,60,0	1/1:0,4:4:6.02:151,6,0	1/1:0,21:21:60.21:1911,60,0	1/1:0,22:22:57.20:1855,57,0	1/1:0,25:25:57.20:1769,57,0	0/0:20,0:20:60.12:0,60,2267	1/1:0,19:19:45.15:1464,45,0	0/0:49,0:49:99:0,147,5931	1/1:0,15:15:30.10:977,30,0	0/0:16,0:16:48.16:0,48,2297	0/0:12,0:12:33.11:0,33,1494	0/0:53,0:53:99:0,160,7452	1/1:0,13:13:30.10:719,30,0	1/1:0,7:7:6.02:134,6,0	1/1:0,21:21:23.71:780,24,0	1/1:0,6:6:6.02:195,6,0	0/1:16,1:17:46.50:47,0,2255	0/0:23,0:23:69.22:0,69,3152	0/0:13,0:13:39.05:0,39,1555
chr10	90164181	.	T	TA	1678.86	PASS	AC=24;AF=0.500;AN=48;BaseQRankSum=11.420;DP=224;FS=6.231;HRun=1;HaplotypeScore=39.3234;InbreedingCoeff=0.8687;MQ=69.32;MQ0=0;MQRankSum=-0.265;QD=15.40;ReadPosRankSum=3.693;VQSLOD=3.4629;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:15.73:188,16,0	1/1:0,1:1:3.01:34,3,0	0/0:4,0:4:9:0,9,99	0/0:8,0:7:13.48:0,13,176	1/1:9,0:9:25.70:131,26,0	0/0:11,0:11:33.11:0,33,427	0/0:13,0:13:39.11:0,39,491	0/0:34,0:34:99:0,99,1193	./.	1/1:3,0:3:8.45:43,8,0	1/1:8,0:8:22.51:105,23,0	1/1:5,0:5:11.24:56,11,0	./.	1/1:3,0:3:8.15:34,8,0	1/1:1,4:5:15.03:156,15,0	1/1:3,0:3:8.61:50,9,0	1/1:4,20:24:68.88:719,69,0	1/1:13,0:13:27.85:129,28,0	0/0:15,0:15:42.12:0,42,523	0/0:5,0:5:15.03:0,15,168	0/0:3,0:3:9.02:0,9,104	./.	0/0:1,0:1:0.89:0,1,2	./.	1/1:17,0:17:42.79:224,43,0	0/0:11,0:11:33.10:0,33,411	0/0:5,0:5:15.05:0,15,194	0/0:4,0:4:12.04:0,12,156
chr10	90164182	.	A	AT	2764.94	PASS	AB=1.000;AC=27;AF=0.563;AN=48;BaseQRankSum=5.487;DP=226;FS=1.891;HRun=6;HaplotypeScore=35.8464;InbreedingCoeff=0.8056;MQ=67.20;MQ0=0;MQRankSum=-1.024;QD=23.04;ReadPosRankSum=2.768;VQSLOD=2.4653;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:19:45.10:547,45,0	1/1:1,0:1:2.68:11,3,0	0/0:3,0:3:9.02:0,9,91	0/1:8,0:7:4.70:5,0,106	1/1:0,9:9:27.09:340,27,0	0/0:11,0:11:33.08:0,33,337	0/0:13,0:13:36.08:0,36,367	0/0:34,0:34:78.17:0,78,795	./.	1/1:0,4:4:9.03:113,9,0	1/1:0,8:8:24.08:302,24,0	1/1:0,5:5:12.04:151,12,0	./.	1/1:0,3:3:9.03:113,9,0	1/1:5,0:5:13.29:54,13,0	1/1:0,3:3:9.03:113,9,0	1/1:24,0:24:53.78:217,54,0	1/1:0,13:13:33.08:400,33,0	0/0:15,0:15:42.08:0,42,421	0/0:5,0:5:12.02:0,12,122	0/0:3,0:3:6.01:0,6,61	./.	1/1:1,0:1:3:25,3,0	./.	1/1:0,17:17:45.14:566,45,0	0/0:12,0:12:30.02:0,30,295	0/0:5,0:5:15.03:0,15,153	0/0:4,0:4:12.03:0,12,122
chr10	90164186	.	T	TTA	1033.19	PASS	AC=6;AF=0.120;AN=50;BaseQRankSum=2.986;DP=228;FS=7.207;HRun=0;HaplotypeScore=48.8359;InbreedingCoeff=0.6490;MQ=66.96;MQ0=0;MQRankSum=1.191;QD=35.63;ReadPosRankSum=2.802;VQSLOD=5.4878;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:25.25:0,25,85	1/1:0,1:1:3.01:45,3,0	0/0:3,0:3:9.03:0,9,130	0/0:8,0:7:14.97:0,15,198	0/0:10,0:10:16.99:0,17,62	0/0:12,0:12:36.11:0,36,526	0/0:12,0:12:36.12:0,36,544	0/0:30,0:30:84.27:0,84,1235	./.	0/0:4,0:4:4.66:0,5,12	0/0:8,0:8:12.44:0,12,33	0/0:6,0:6:12.17:0,12,58	0/0:2,0:2:3:0,3,27	0/0:3,0:3:4.66:0,5,13	1/1:1,4:5:15.05:209,15,0	0/0:4,0:4:4.66:0,5,12	1/1:3,20:23:47.35:904,47,0	0/0:15,0:15:19.43:0,19,69	0/0:14,0:14:42.14:0,42,618	0/0:5,0:5:15.04:0,15,205	0/0:2,0:2:6.02:0,6,91	./.	0/0:2,0:2:3.88:0,4,27	./.	0/0:18,0:18:26.33:0,26,89	0/0:13,0:13:39.11:0,39,524	0/0:5,0:5:15.05:0,15,227	0/0:4,0:4:12.04:0,12,182
chr10	90164238	.	TG	T	1278.51	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=3.905;DP=330;FS=12.030;HRun=2;HaplotypeScore=53.7485;InbreedingCoeff=0.8537;MQ=68.29;MQ0=1;MQRankSum=-1.133;QD=8.82;ReadPosRankSum=-1.760;VQSLOD=-0.6008;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,2:18:31.42:217,31,0	0/0:2,0:2:6.01:0,6,71	0/0:12,0:6:12.46:0,12,130	0/0:10,0:9:18.09:0,18,244	1/1:12,1:12:24.88:175,25,0	0/0:15,0:15:36.42:0,36,369	0/0:15,0:15:38.98:0,39,496	0/0:38,0:37:99:0,102,1182	1/1:5,0:4:6.21:39,6,0	1/1:10,0:10:12.99:136,13,0	1/1:13,0:13:29.94:242,30,0	1/1:10,0:10:5.46:54,5,0	1/1:3,1:4:5.98:49,6,0	0/0:2,0:2:0.31:0,0,0	0/0:8,0:8:23.95:0,24,259	1/1:6,1:7:16.45:112,16,0	0/0:20,0:20:60.08:0,60,720	1/1:24,0:23:13.86:81,14,0	0/0:12,0:12:36.04:0,36,440	0/0:10,0:10:28.89:0,29,366	0/0:8,0:8:20.88:0,21,242	1/1:2,0:2:4.56:30,5,0	1/1:12,0:12:9.42:87,9,0	1/1:8,1:9:3.70:54,4,0	1/1:18,0:18:27.96:211,28,0	0/0:14,0:14:39.12:0,39,451	0/0:7,0:7:15.03:0,15,180	0/0:12,0:12:28.16:0,28,361
chr10	90164239	.	GGT	G	288.19	PASS	AB=0.940;AC=11;AF=0.196;AN=56;BaseQRankSum=2.248;DP=328;FS=0.000;HRun=0;HaplotypeScore=60.1189;InbreedingCoeff=-0.1712;MQ=68.34;MQ0=1;MQRankSum=0.205;QD=2.51;ReadPosRankSum=-3.549;VQSLOD=0.6931;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,2:18:59.97:60,0,60	0/0:2,0:2:6.01:0,6,87	0/0:12,0:6:11.99:0,12,153	0/0:10,0:9:23.31:0,23,330	0/1:13,0:12:23.94:24,0,41	0/0:15,0:15:42:0,42,531	0/0:14,0:14:42.10:0,42,701	0/0:37,0:36:99:0,103,1600	0/0:5,0:4:5.83:0,6,35	0/1:10,0:10:49.22:63,0,49	0/1:12,0:13:16.47:80,0,16	0/1:8,1:10:8.75:9,0,68	0/1:4,0:4:3.11:3,0,13	0/0:2,0:2:5.80:0,6,33	0/0:8,0:8:23.99:0,24,360	0/1:7,0:7:15.24:29,0,15	0/0:20,0:20:60.14:0,60,972	0/0:21,2:23:13.83:0,14,218	0/0:12,0:12:36.05:0,36,582	0/0:10,0:10:30.07:0,30,511	0/0:8,0:8:24.06:0,24,374	0/1:0,1:2:3.37:42,0,3	0/1:11,1:12:54.89:55,0,104	0/1:9,0:9:6.24:6,0,69	0/1:16,1:17:58.70:59,0,62	0/0:14,0:14:42.09:0,42,650	0/0:8,0:8:24.01:0,24,314	0/0:12,0:12:33.04:0,33,511
chr10	90164392	.	TC	T	2011.39	PASS	AB=0.944;AC=32;AF=0.571;AN=56;BaseQRankSum=4.949;DP=342;FS=1.704;HRun=1;HaplotypeScore=49.6150;InbreedingCoeff=0.7721;MQ=52.36;MQ0=14;MQRankSum=-5.546;QD=10.16;ReadPosRankSum=-2.242;VQSLOD=0.6251;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:22:28.49:193,28,0	1/1:4,2:5:14.95:126,15,0	0/0:15,0:5:9.21:0,9,70	0/0:13,0:8:3.22:0,3,116	0/1:7,1:8:3.03:40,0,3	0/0:15,0:15:30.56:0,31,247	0/0:14,0:13:26.96:0,27,220	0/0:17,0:17:19.20:0,19,273	1/1:7,0:7:14.19:76,14,0	1/1:13,0:12:29.73:192,30,0	1/1:9,3:12:28.90:212,29,0	1/1:12,0:12:1.62:89,2,0	1/1:5,0:5:10.51:73,11,0	0/1:5,0:5:3.61:48,0,4	1/1:9,0:9:24.91:222,25,0	1/1:8,0:8:19.96:121,20,0	1/1:21,2:21:12.80:227,13,0	1/1:18,1:16:30.33:176,30,0	0/0:16,0:15:16.28:0,16,228	0/0:11,0:11:32.90:0,33,281	0/0:11,0:10:16.77:0,17,139	1/1:1,0:1:2.97:20,3,0	1/1:13,0:13:28.13:136,28,0	1/1:17,0:16:9.55:52,10,0	1/1:14,0:14:28.84:215,29,0	0/0:21,0:20:38.97:0,39,352	0/0:6,0:6:10.05:0,10,93	0/0:4,0:3:8.97:0,9,76
chr10	90164411	.	TC	T	2787.27	PASS	AB=0.942;AC=46;AF=0.821;AN=56;BaseQRankSum=-4.949;DP=290;FS=9.982;HRun=2;HaplotypeScore=42.5257;InbreedingCoeff=0.0882;MQ=44.87;MQ0=24;MQRankSum=0.205;QD=9.95;ReadPosRankSum=-3.820;VQSLOD=-0.7488;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:22:19.78:137,0,20	1/1:5,0:4:11.80:79,12,0	0/0:7,1:2:2.84:0,3,14	0/0:2,0:1:2.60:0,3,10	0/1:17,0:14:4.90:139,0,5	0/1:16,0:15:15.81:60,0,16	1/1:10,2:9:14.81:111,15,0	1/1:12,1:13:33.56:226,34,0	1/1:8,0:7:17.84:129,18,0	1/1:6,0:5:11.94:95,12,0	1/1:7,0:7:6.37:51,6,0	0/1:13,0:12:9.50:98,0,9	1/1:5,0:5:12.40:94,12,0	0/1:7,0:7:14.57:74,0,15	1/1:4,1:5:8.97:79,9,0	1/1:14,0:14:25.28:185,25,0	0/1:8,8:13:21.98:41,0,22	1/1:12,0:11:21.63:144,22,0	1/1:12,1:10:23.81:185,24,0	1/1:6,0:6:5.93:39,6,0	1/1:9,1:9:16.47:130,16,0	1/1:7,0:7:17.94:146,18,0	1/1:10,0:10:8.93:65,9,0	1/1:13,0:13:20.81:155,21,0	1/1:9,0:8:6.58:31,7,0	1/1:2,11:12:29.43:223,29,0	1/1:9,0:9:20.88:156,21,0	1/1:5,0:4:8.34:52,8,0
chr10	90164888	.	TATATGTGTATGTGTGTAA	T	366.67	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=2.137;DP=824;FS=4.884;HRun=0;HaplotypeScore=351.4388;InbreedingCoeff=0.9714;MQ=61.14;MQ0=6;MQRankSum=-1.347;QD=20.37;ReadPosRankSum=-0.023;VQSLOD=1.2077;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:63.03:0,63,2182	./.	0/0:26,0:18:27.56:0,28,398	0/0:24,0:14:12.79:0,13,222	0/0:37,0:37:97.44:0,97,3687	0/0:27,0:27:69.18:0,69,2983	0/0:20,0:20:36.11:0,36,1041	0/0:46,0:45:33.08:0,33,586	0/0:20,0:20:33.10:0,33,1186	0/0:35,0:35:84.29:0,84,3915	0/0:33,0:33:72.15:0,72,2737	0/0:30,0:29:60.19:0,60,2508	0/0:22,0:22:42.13:0,42,1846	0/0:33,0:33:87.27:0,87,3342	./.	0/0:28,0:28:48.01:0,48,1586	1/1:18,0:18:25.04:460,25,0	0/0:27,0:28:51.11:0,51,1225	0/0:24,0:21:42.14:0,42,1688	0/0:38,0:37:96.28:0,96,4098	0/0:33,0:33:69.18:0,69,3075	0/0:29,0:29:57.11:0,57,2236	0/0:34,0:34:69.13:0,69,2845	0/0:22,0:22:43.36:0,43,1589	0/0:38,0:38:57.17:0,57,2729	0/0:35,0:35:87.28:0,87,4514	0/0:43,0:43:99:0,102,4347	0/0:22,0:22:66.23:0,66,3328
chr10	90164965	.	A	ATG	15129.19	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-7.105;DP=771;FS=3.600;HRun=0;HaplotypeScore=144.2244;InbreedingCoeff=0.9305;MQ=59.12;MQ0=4;MQRankSum=-0.928;QD=34.31;ReadPosRankSum=4.366;VQSLOD=6.6861;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,33:38:83.23:1398,83,0	0/0:16,0:15:27.06:0,27,336	0/0:24,0:15:16.62:0,17,303	0/1:14,0:14:11.23:11,0,157	1/1:8,32:40:58.16:1007,58,0	0/0:32,0:31:78.18:0,78,982	0/0:15,0:15:29.64:0,30,326	0/0:51,0:51:99:0,141,1751	1/1:3,26:29:69.24:1205,69,0	1/1:5,34:40:99:1821,108,0	1/1:5,22:27:42.13:715,42,0	1/1:9,18:26:66.15:1047,66,0	1/1:5,15:20:54.14:911,54,0	1/1:8,17:25:75.16:1150,75,0	0/0:22,0:20:18.04:0,18,247	1/1:2,32:34:75.24:1327,75,0	0/0:17,0:17:30.08:0,30,393	1/1:4,20:24:39.05:688,39,0	0/0:17,0:16:39.12:0,39,515	0/0:29,0:29:63.18:0,63,818	0/0:28,0:28:63.10:0,63,785	1/1:6,19:26:36:638,36,0	1/1:6,19:25:45.11:767,45,0	1/1:5,26:30:66.15:1129,66,0	1/1:2,39:41:75.26:1313,75,0	0/0:31,0:31:81.22:0,81,1038	0/0:17,0:17:42.05:0,42,487	0/0:30,0:30:66.12:0,66,828
chr10	90165008	.	T	TAC	6450.80	PASS	AB=0.770;AC=23;AF=0.442;AN=52;BaseQRankSum=-11.809;DP=679;FS=10.524;HRun=0;HaplotypeScore=165.7768;InbreedingCoeff=0.5061;MQ=57.23;MQ0=11;MQRankSum=-0.429;QD=17.25;ReadPosRankSum=-1.293;VQSLOD=4.1379;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,18:40:22.60:726,23,0	0/0:7,0:13:17.04:0,17,84	./.	./.	0/1:21,11:32:10.24:336,0,10	0/0:6,0:22:34.09:0,34,168	0/0:4,0:12:11.36:0,11,56	0/0:15,0:36:31.64:0,32,158	1/1:20,12:32:16.99:678,17,0	1/1:25,14:39:0.12:720,0,0	0/1:15,9:24:4.38:365,0,4	1/1:13,19:32:60.17:883,60,0	1/1:9,15:24:5.57:346,6,0	1/1:12,13:26:2.67:537,3,0	0/0:3,0:23:45.35:0,45,223	0/1:20,9:29:23.87:489,0,24	0/0:4,0:23:35.99:0,36,169	1/1:10,6:16:27.01:361,27,0	0/0:10,0:22:29.08:0,29,140	0/0:3,0:21:39.77:0,40,196	0/0:11,0:28:24.95:0,25,119	0/1:13,5:18:47.89:188,0,48	1/1:10,4:14:18.06:277,18,0	1/1:15,7:21:1.61:417,2,0	0/1:20,5:24:12.46:128,0,12	0/0:6,1:34:13.63:0,14,240	0/0:4,0:17:25.40:0,25,126	0/0:5,0:15:14.20:0,14,70
chr10	90165259	.	C	CTTT	1365.68	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=0.727;DP=544;FS=0.693;HRun=10;HaplotypeScore=114.0780;InbreedingCoeff=0.6960;MQ=63.19;MQ0=12;MQRankSum=-4.875;QD=24.39;ReadPosRankSum=-2.135;VQSLOD=1.8290;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:15:17.88:0,18,200	1/1:4,6:9:15.02:248,15,0	0/0:38,0:15:23.63:0,24,250	0/0:52,0:14:19.94:0,20,219	0/0:27,0:26:41.96:0,42,511	0/1:12,0:12:1.73:2,0,164	0/0:12,0:12:23.99:0,24,292	0/0:26,0:26:15.88:0,16,369	0/0:9,0:9:3.79:0,4,102	0/0:27,0:27:41.76:0,42,510	0/0:23,0:23:45.08:0,45,529	0/0:8,0:9:5.85:0,6,54	0/0:9,0:9:18.02:0,18,219	0/0:13,0:13:5.92:0,6,73	1/1:9,4:13:30.10:460,30,0	0/0:12,0:13:26.93:0,27,309	1/1:8,13:19:42.14:795,42,0	0/0:19,0:15:26.79:0,27,312	0/0:29,0:29:21.54:0,22,503	0/0:24,0:23:35.87:0,36,437	0/0:4,0:4:2.97:0,3,36	0/0:10,0:11:7.28:0,7,106	0/0:24,0:24:48.02:0,48,583	0/0:7,0:6:8.98:0,9,109	0/0:18,0:17:11.68:0,12,146	0/0:31,0:33:71.99:0,72,833	0/0:21,0:21:32.91:0,33,401	0/0:24,0:24:32.93:0,33,387
chr10	90166642	.	ATTG	A	18701.78	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.349;DP=685;FS=0.749;HRun=0;HaplotypeScore=102.6640;InbreedingCoeff=0.9968;MQ=69.26;MQ0=0;MQRankSum=-2.113;QD=29.45;ReadPosRankSum=6.132;VQSLOD=4.5868;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,31:35:69.23:992,69,0	1/1:0,11:11:24.08:345,24,0	0/0:31,0:29:46.34:0,46,857	0/0:19,0:15:24.06:0,24,397	1/1:11,27:38:72.24:1035,72,0	1/1:6,20:26:54.18:777,54,0	1/1:7,12:19:30.10:431,30,0	1/1:11,18:29:50.85:722,51,0	1/1:1,13:15:42.14:603,42,0	1/1:7,26:33:75.22:1040,75,0	1/1:5,20:25:57.10:781,57,0	1/1:5,15:20:42.13:588,42,0	1/1:1,16:17:45.15:647,45,0	1/1:7,16:23:39.13:561,39,0	1/1:3,23:26:54.18:769,54,0	1/1:5,16:21:36.05:485,36,0	1/1:6,25:31:62.82:1022,63,0	1/1:5,22:27:54.18:777,54,0	1/1:4,11:15:33.10:449,33,0	1/1:4,26:30:69.02:898,69,0	1/1:3,11:14:27.09:388,27,0	1/1:3,15:18:39.13:561,39,0	1/1:10,22:32:59.87:829,60,0	1/1:4,17:21:45.15:637,45,0	1/1:6,20:26:48.16:691,48,0	1/1:9,22:31:66.22:949,66,0	1/1:3,30:33:81.27:1164,81,0	1/1:5,14:19:39.13:559,39,0
chr10	90168027	.	G	GA	3147.83	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-9.962;DP=563;FS=15.092;HRun=11;HaplotypeScore=64.4075;InbreedingCoeff=0.8976;MQ=72.80;MQ0=2;MQRankSum=-0.890;QD=16.83;ReadPosRankSum=-0.955;VQSLOD=2.8970;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:76.68:0,77,584	0/0:6,0:7:11.95:0,12,93	0/0:29,0:21:23.64:0,24,178	0/0:19,0:15:21.67:0,22,146	0/0:20,0:20:38.77:0,39,298	1/1:6,12:18:18.97:366,19,0	1/1:3,12:16:12.73:296,13,0	1/1:5,23:28:42.84:595,43,0	0/0:20,1:21:23.31:0,23,364	0/0:19,0:20:52.83:0,53,399	0/0:14,0:14:35.82:0,36,274	0/0:14,1:16:4.45:0,4,208	0/0:15,0:16:40.87:0,41,307	0/0:9,2:12:1.49:0,1,184	0/0:18,0:18:44.82:0,45,348	0/0:14,0:14:35.85:0,36,276	0/0:29,1:30:50.20:0,50,565	0/0:29,1:30:47.26:0,47,545	1/1:7,15:22:45.09:457,45,0	1/1:4,13:17:35.84:313,36,0	1/1:6,21:27:27.56:436,28,0	0/0:10,0:10:17.92:0,18,139	0/0:15,0:15:32.84:0,33,255	0/0:26,0:26:65.73:0,66,511	0/0:24,1:26:25.81:0,26,373	1/1:8,16:25:3.81:412,4,0	1/1:3,18:24:18.18:396,18,0	1/1:8,2:10:8.97:80,9,0
chr10	90168136	.	G	GA	13558.48	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.915;DP=602;FS=12.040;HRun=9;HaplotypeScore=58.0222;InbreedingCoeff=0.9698;MQ=62.99;MQ0=2;MQRankSum=-1.732;QD=23.79;ReadPosRankSum=3.834;VQSLOD=4.9689;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,32:37:84.06:910,84,0	1/1:3,6:9:12.03:133,12,0	0/0:20,0:16:41.98:0,42,362	0/0:12,0:8:20.02:0,20,158	1/1:8,24:32:63.12:678,63,0	1/1:2,18:20:25.08:505,25,0	1/1:1,16:18:47.96:512,48,0	1/1:5,23:28:20.04:660,20,0	1/1:2,8:11:18.05:199,18,0	1/1:2,17:19:22.06:462,22,0	1/1:5,17:23:22.59:453,23,0	1/1:1,19:21:56.99:611,57,0	1/1:1,15:16:39.11:431,39,0	1/1:3,13:16:33.09:365,33,0	1/1:2,15:17:38.94:413,39,0	1/1:1,11:13:32.92:346,33,0	1/1:6,17:23:50.91:583,51,0	1/1:3,15:18:36.10:398,36,0	1/1:6,14:19:39.48:397,39,0	1/1:5,19:24:51.10:543,51,0	1/1:7,13:20:54.11:575,54,0	1/1:4,24:28:72.19:794,72,0	1/1:2,20:22:28.09:538,28,0	1/1:7,19:27:54.45:579,54,0	1/1:4,26:30:37.01:619,37,0	1/1:7,19:27:37.06:619,37,0	1/1:2,31:33:64.20:936,64,0	1/1:3,14:17:27.07:299,27,0
chr10	90170414	.	T	TAC	4218.20	PASS	AB=0.830;AC=28;AF=0.519;AN=54;BaseQRankSum=-8.402;DP=545;FS=5.113;HRun=0;HaplotypeScore=95.6303;InbreedingCoeff=0.3245;MQ=54.53;MQ0=9;MQRankSum=0.916;QD=12.05;ReadPosRankSum=-1.519;VQSLOD=4.0750;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:34:41.59:0,42,200	1/1:7,0:8:8.49:60,8,0	1/1:16,0:7:0.47:1,0,0	./.	1/1:13,9:22:0.25:395,0,0	0/0:13,0:15:13.19:0,13,60	0/1:19,0:23:6.97:7,0,50	0/0:30,0:29:3.75:0,4,28	0/1:18,8:26:2.76:594,0,3	0/1:18,0:19:47.49:109,0,47	0/1:16,5:21:11.77:214,0,12	0/1:14,4:18:29.99:336,0,30	1/1:5,8:14:24.07:359,24,0	1/1:13,2:15:18.02:207,18,0	1/1:19,0:21:14.45:96,14,0	0/1:16,8:23:89.23:363,0,89	1/1:18,0:18:11.85:87,12,0	1/1:11,7:18:21.07:314,21,0	0/0:14,0:17:9.41:0,9,44	0/0:9,0:14:17:0,17,83	0/0:12,0:17:18.86:0,19,90	0/1:9,5:15:21.24:123,0,21	0/1:16,4:20:71.35:178,0,71	1/1:24,10:34:21.28:660,21,0	1/1:8,7:17:9.02:116,9,0	0/0:8,0:18:28.41:0,28,140	0/0:14,0:28:29.99:0,30,213	0/0:3,0:6:14.52:0,15,94
chr10	90170500	.	ATGTGTG	A	6690.84	PASS	AB=0.650;AC=42;AF=0.750;AN=56;BaseQRankSum=6.615;DP=691;FS=0.000;HRun=0;HaplotypeScore=185.1141;InbreedingCoeff=0.4040;MQ=55.13;MQ0=26;MQRankSum=-4.116;QD=12.65;ReadPosRankSum=2.313;VQSLOD=4.0770;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:41:72.03:0,72,2180	1/1:3,0:9:7.30:23,7,0	0/0:47,0:15:12.04:0,12,258	0/0:60,0:13:15.05:0,15,417	1/1:6,9:16:27.09:457,27,0	1/1:6,0:17:8.53:15,9,0	0/1:17,0:27:17.87:20,0,18	0/1:11,0:17:11.90:12,0,31	1/1:8,13:21:30.10:541,30,0	1/1:7,21:28:60.10:1157,60,0	1/1:3,17:21:33.99:550,34,0	1/1:8,18:26:39.08:684,39,0	1/1:6,11:17:21.07:405,21,0	1/1:6,12:19:19.31:373,19,0	1/1:3,0:17:1.88:9,2,0	1/1:10,16:27:45.15:738,45,0	1/1:8,0:28:13.76:25,14,0	1/1:4,13:17:2.93:333,3,0	0/0:13,0:13:2.44:0,2,24	0/1:7,0:18:3.48:3,0,15	0/1:19,0:41:6.20:6,0,14	1/1:9,12:21:21.07:339,21,0	1/1:4,13:19:30.99:494,31,0	1/1:13,12:26:4.26:56,4,0	1/1:1,8:10:21.07:371,21,0	0/1:6,1:25:9.83:63,0,10	1/1:18,0:32:7.67:14,8,0	0/1:9,0:28:2.32:2,0,48
chr10	90171522	.	TA	T	1693.11	PASS	AB=0.889;AC=25;AF=0.446;AN=56;BaseQRankSum=-4.758;DP=432;FS=5.329;HRun=14;HaplotypeScore=64.9584;InbreedingCoeff=0.6627;MQ=73.97;MQ0=2;MQRankSum=-1.310;QD=9.67;ReadPosRankSum=4.919;VQSLOD=3.1193;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,3:34:30.85:0,31,543	0/1:6,0:6:9.25:9,0,42	0/0:21,0:14:3.39:0,3,94	0/1:11,0:9:8.94:9,0,36	1/1:5,20:25:50.50:349,50,0	0/0:9,0:12:26.89:0,27,180	0/0:5,0:9:17.52:0,18,122	0/0:31,0:41:50.64:0,51,290	1/1:0,8:8:17.84:123,18,0	1/1:6,15:22:47.52:324,48,0	1/1:5,8:13:22.85:150,23,0	1/1:5,10:15:0.06:120,0,0	0/1:4,4:8:11.42:49,0,11	1/1:3,5:8:8.91:62,9,0	0/0:3,0:6:5.68:0,6,29	1/1:3,10:13:26.74:185,27,0	0/0:5,0:21:31.40:0,31,172	1/1:4,19:23:44.58:306,45,0	0/0:11,0:22:37.35:0,37,220	0/0:3,0:19:48:0,48,271	0/0:3,0:13:7.52:0,8,52	0/0:5,0:5:3:0,3,28	1/1:3,8:11:8.89:62,9,0	1/1:3,3:6:8.92:62,9,0	1/1:1,4:6:13.93:88,14,0	0/0:4,0:16:27:0,27,162	0/0:12,0:27:26.51:0,27,163	0/0:2,0:10:17.04:0,17,86
chr10	90172056	.	G	GTA	1538.24	PASS	AB=0.773;AC=6;AF=0.107;AN=56;BaseQRankSum=-6.572;DP=538;FS=5.062;HRun=0;HaplotypeScore=70.7767;InbreedingCoeff=0.5968;MQ=78.02;MQ0=5;MQRankSum=0.546;QD=20.79;ReadPosRankSum=-0.031;VQSLOD=3.2088;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:40.86:0,41,484	1/1:1,8:10:21.06:322,21,0	0/1:21,0:10:0.02:1,0,0	0/0:42,0:27:1.98:0,2,108	0/0:30,0:30:66.19:0,66,805	0/0:22,0:23:56.98:0,57,655	0/0:12,0:12:27.07:0,27,322	0/0:34,0:34:72.16:0,72,825	0/0:16,0:16:39.11:0,39,471	0/0:31,0:31:78.21:0,78,926	0/0:24,0:24:60.19:0,60,743	0/0:11,0:11:30.09:0,30,372	0/0:13,0:13:36.11:0,36,445	0/0:9,0:10:29.93:0,30,348	1/1:6,13:19:1.98:553,2,0	0/0:16,0:17:41.94:0,42,472	0/1:4,20:24:16.60:779,0,17	0/0:17,0:17:42.13:0,42,519	0/0:12,0:12:30.07:0,30,347	0/0:16,0:17:44.88:0,45,489	0/0:10,0:10:27.08:0,27,334	0/0:5,0:5:12.04:0,12,149	0/0:21,0:22:44.94:0,45,507	0/0:8,0:8:15.05:0,15,186	0/0:21,0:22:60.02:0,60,720	0/0:31,0:31:75.21:0,75,907	0/0:24,0:24:60.19:0,60,743	0/0:11,0:11:33.10:0,33,409
chr10	90172631	.	T	TTTTG	9684.97	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-12.295;DP=547;FS=0.000;HRun=0;HaplotypeScore=89.0298;InbreedingCoeff=0.9174;MQ=65.45;MQ0=7;MQRankSum=3.005;QD=41.21;ReadPosRankSum=1.617;VQSLOD=5.0599;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:72.21:0,72,1089	0/0:1,0:3:3:0,3,28	0/0:30,0:21:9:0,9,98	0/0:32,0:20:6.62:0,7,73	1/1:7,17:25:45.07:998,45,0	0/0:15,0:15:27.08:0,27,407	0/0:18,0:18:48.10:0,48,690	0/0:28,0:28:23.25:0,23,256	1/1:3,7:10:18.06:429,18,0	1/1:9,18:28:60.19:1362,60,0	1/1:4,13:20:42.06:907,42,0	1/1:1,14:15:27.09:643,27,0	1/1:3,7:10:9.03:214,9,0	1/1:3,9:13:21.07:500,21,0	0/0:4,0:22:33.02:0,33,301	1/1:5,13:18:39.13:913,39,0	0/0:8,0:26:26.91:0,27,255	1/1:5,9:16:2.88:581,3,0	0/0:16,0:14:15.04:0,15,217	0/0:14,0:14:24.07:0,24,359	0/0:11,0:11:27.09:0,27,427	1/1:6,11:17:33.11:774,33,0	1/1:9,15:26:48.64:1077,49,0	1/1:1,14:19:24.08:571,24,0	1/1:6,12:18:30.10:714,30,0	0/0:18,0:18:36.10:0,36,511	0/0:23,0:23:51.17:0,51,789	0/0:22,0:22:39.12:0,39,598
chr10	90172866	.	AAAC	A	2016.98	PASS	AB=0.989;AC=33;AF=0.589;AN=56;BaseQRankSum=0.733;DP=534;FS=24.596;HRun=0;HaplotypeScore=123.4551;InbreedingCoeff=-0.4158;MQ=76.20;MQ0=5;MQRankSum=-0.388;QD=4.42;ReadPosRankSum=0.250;VQSLOD=0.9519;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,1:28:48.76:225,0,49	0/1:10,0:10:39.45:39,0,108	0/0:42,0:27:53.55:0,54,695	0/0:36,0:25:19.92:0,20,358	0/1:30,0:30:77.18:134,0,77	0/1:16,0:15:11.42:76,0,11	1/1:16,0:16:3.84:126,4,0	1/1:20,0:20:33.88:247,34,0	1/1:11,0:11:8.46:39,8,0	0/1:23,0:23:65.13:181,0,65	0/1:16,0:16:39.09:57,0,39	1/1:9,0:9:9.38:48,9,0	1/1:13,0:13:5.45:33,5,0	0/1:12,0:12:1.81:2,0,2	0/1:13,0:12:52.11:52,0,129	0/1:21,1:22:37.24:116,0,37	0/1:19,0:19:11.32:11,0,258	0/1:19,0:19:13.93:29,0,14	0/1:10,1:11:11.72:135,0,12	1/1:22,0:22:0.80:167,1,0	0/1:10,0:10:24.98:79,0,25	0/1:8,0:8:32.91:78,0,33	0/1:20,0:20:36.62:80,0,37	0/1:24,0:24:10.37:30,0,10	1/1:16,0:16:6.10:16,6,0	0/1:21,0:21:36.51:37,0,71	0/1:27,0:26:21.13:21,0,67	0/1:19,1:20:12.10:118,0,12
chr10	90172867	.	AAC	A	6310.13	PASS	AB=0.991;AC=48;AF=0.857;AN=56;BaseQRankSum=-4.848;DP=538;FS=9.497;HRun=0;HaplotypeScore=101.1053;InbreedingCoeff=0.3557;MQ=76.16;MQ0=5;MQRankSum=-2.833;QD=13.72;ReadPosRankSum=-2.017;VQSLOD=3.7556;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,2:29:39.45:450,39,0	0/1:11,0:11:33.02:49,0,33	0/0:42,0:27:45.53:0,46,492	0/0:36,0:25:23.12:0,23,276	1/1:28,3:31:43.68:571,44,0	1/1:14,2:15:30.79:309,31,0	1/1:14,2:16:34.92:354,35,0	1/1:20,0:20:50.89:405,51,0	1/1:10,1:11:14.73:134,15,0	1/1:22,1:23:10.52:362,11,0	1/1:16,1:17:34.11:272,34,0	1/1:8,0:8:17.65:147,18,0	1/1:14,0:14:20.33:120,20,0	1/1:12,0:12:11.33:60,11,0	0/1:12,0:11:34.01:74,0,34	1/1:21,0:21:32.42:324,32,0	0/1:19,0:19:79.53:84,0,80	1/1:17,2:19:11.22:153,11,0	1/1:11,0:11:20.57:186,21,0	1/1:20,2:22:47.81:490,48,0	1/1:9,2:11:13.08:232,13,0	1/1:8,0:8:0.99:113,1,0	1/1:19,1:20:33.18:339,33,0	1/1:25,0:25:19.85:199,20,0	1/1:17,0:17:20.22:115,20,0	1/1:20,1:21:22.11:294,22,0	0/1:25,1:25:12.21:165,0,12	1/1:19,1:20:38.09:306,38,0
chr10	90172868	.	AC	A	10917.24	PASS	AB=0.972;AC=53;AF=0.946;AN=56;BaseQRankSum=-6.035;DP=537;FS=9.195;HRun=1;HaplotypeScore=77.7873;InbreedingCoeff=0.7184;MQ=76.24;MQ0=3;MQRankSum=-2.598;QD=22.01;ReadPosRankSum=0.272;VQSLOD=4.0157;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,8:29:77.35:776,77,0	1/1:12,0:12:22.27:132,22,0	0/0:41,0:27:25.21:0,25,309	0/1:34,1:25:4.21:4,0,180	1/1:22,9:31:86.83:890,87,0	1/1:11,5:15:44.10:463,44,0	1/1:10,6:16:45.92:517,46,0	1/1:1,18:19:53.89:534,54,0	1/1:1,10:11:15.03:178,15,0	1/1:18,5:23:51.11:589,51,0	1/1:2,15:17:40.47:403,40,0	1/1:1,7:8:18:214,18,0	1/1:1,13:14:21.06:269,21,0	1/1:0,11:11:12.03:150,12,0	1/1:11,1:11:23.11:167,23,0	1/1:15,7:22:60.15:687,60,0	1/1:17,2:19:36.55:280,37,0	1/1:3,16:19:21.93:257,22,0	1/1:2,9:11:31.28:339,31,0	1/1:16,6:22:61.13:640,61,0	1/1:6,5:11:31.55:290,32,0	1/1:6,3:9:23.48:238,23,0	1/1:11,9:20:57.12:614,57,0	1/1:1,24:25:30.94:399,31,0	1/1:0,17:17:21.02:292,21,0	1/1:4,17:21:55.71:599,56,0	1/1:3,23:25:13.77:400,14,0	1/1:10,10:20:52.32:595,52,0
chr10	90173546	.	AACACAC	A	1486.41	PASS	AC=22;AF=0.458;AN=48;BaseQRankSum=1.466;DP=405;FS=15.194;HRun=0;HaplotypeScore=83.2731;InbreedingCoeff=0.7566;MQ=60.00;MQ0=12;MQRankSum=-5.093;QD=13.64;ReadPosRankSum=2.446;VQSLOD=1.4211;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:39.12:0,39,1006	0/0:3,0:3:6.02:0,6,182	./.	./.	1/1:12,9:20:17.92:240,18,0	0/0:25,0:23:6.86:0,7,156	0/0:14,0:14:9.03:0,9,244	0/0:18,0:18:3.01:0,3,79	1/1:4,0:4:9.02:146,9,0	./.	1/1:4,5:11:15.05:265,15,0	1/1:2,1:3:3.01:61,3,0	1/1:3,4:7:6.02:121,6,0	./.	0/0:5,0:10:6.02:0,6,166	1/1:7,3:9:4.97:119,5,0	0/0:20,0:32:24.82:0,25,657	1/1:10,1:11:5.98:80,6,0	0/0:17,0:17:18.06:0,18,532	0/0:12,0:12:24.08:0,24,647	0/0:16,0:27:15.02:0,15,241	1/1:4,6:10:6.02:121,6,0	1/1:2,5:8:9.03:163,9,0	1/1:10,0:10:5.98:48,6,0	1/1:7,7:14:15.05:302,15,0	0/0:19,0:20:25.61:0,26,611	0/0:15,0:15:15.05:0,15,374	0/0:5,0:13:9.03:0,9,204
chr10	90173589	.	A	ACACA	979.98	PASS	AB=1.000;AC=25;AF=0.500;AN=50;BaseQRankSum=-5.833;DP=403;FS=0.000;HRun=0;HaplotypeScore=74.9344;InbreedingCoeff=0.5407;MQ=58.48;MQ0=10;MQRankSum=5.157;QD=4.52;ReadPosRankSum=0.863;VQSLOD=1.5934;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:12.03:0,12,184	1/1:4,0:4:2.97:20,3,0	./.	./.	0/0:20,0:20:9.01:0,9,84	1/1:16,7:23:6.46:91,6,0	1/1:8,0:8:5.95:87,6,0	1/1:21,0:20:0.89:2,1,0	0/0:9,0:9:6.01:0,6,56	./.	0/0:12,0:11:15:0,15,135	0/0:5,0:5:3:0,3,28	0/0:8,0:8:5.57:0,6,56	0/1:9,0:9:0:0,0,0	1/1:10,0:10:2.74:12,3,0	0/0:7,0:7:6:0,6,56	0/1:34,0:34:24.55:54,0,25	0/0:13,0:13:3:0,3,28	1/1:15,0:15:12.03:156,12,0	1/1:9,0:9:20.92:260,21,0	1/1:25,0:24:2.93:70,3,0	0/0:8,0:8:6.01:0,6,56	0/0:10,0:10:9.16:0,9,68	0/1:7,0:7:0:0,0,0	0/0:11,0:11:15.02:0,15,140	1/1:15,0:15:22.36:225,22,0	1/1:9,0:9:8.97:92,9,0	1/1:27,0:26:3.01:70,3,0
chr10	90174020	.	A	AG	1088.58	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-7.521;DP=459;FS=14.551;HRun=8;HaplotypeScore=85.1464;InbreedingCoeff=0.6658;MQ=61.13;MQ0=18;MQRankSum=2.292;QD=5.95;ReadPosRankSum=0.122;VQSLOD=0.2017;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:14.45:0,14,36	0/0:7,0:7:15.01:0,15,137	0/1:43,0:15:12.19:12,0,106	0/0:36,0:8:6.79:0,7,124	0/0:26,0:25:21.28:0,21,55	1/1:2,8:10:21.06:240,21,0	1/1:3,12:15:12.03:137,12,0	1/1:8,5:11:14.97:142,15,0	0/0:9,0:9:8.56:0,9,23	0/1:16,0:15:9.56:10,0,15	0/0:24,0:24:21.80:0,22,56	0/0:17,0:16:14.27:0,14,37	0/0:3,0:3:3.63:0,4,9	0/0:10,0:10:12.72:0,13,32	0/0:21,0:21:46.38:0,46,370	0/0:11,0:11:9.71:0,10,25	0/0:29,0:29:62.45:0,62,539	0/0:27,0:26:32.43:0,32,82	1/1:3,2:9:11.67:84,12,0	1/1:3,9:14:18:190,18,0	1/1:1,5:6:6.02:69,6,0	0/0:8,0:8:5.45:0,5,14	0/0:18,0:16:5.74:0,6,16	0/1:21,0:19:1.84:2,0,18	0/0:11,0:11:9.08:0,9,23	1/1:3,10:13:21.86:193,22,0	1/1:3,10:12:6.02:69,6,0	1/1:0,8:8:12.03:137,12,0
chr10	90174026	.	GGGT	G	5305.40	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-6.403;DP=466;FS=3.737;HRun=0;HaplotypeScore=72.4502;InbreedingCoeff=0.9384;MQ=58.59;MQ0=24;MQRankSum=-1.571;QD=24.01;ReadPosRankSum=1.463;VQSLOD=4.6729;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:24.08:383,24,0	0/0:8,0:8:18.03:0,18,311	0/0:41,0:12:14.15:0,14,317	0/0:37,0:8:19.84:0,20,235	1/1:3,29:31:47.99:655,48,0	0/0:9,0:9:21.05:0,21,267	0/0:16,0:15:17.99:0,18,205	0/0:14,0:9:21.02:0,21,280	1/1:0,9:9:15.05:239,15,0	1/1:1,17:17:42.02:523,42,0	1/1:1,21:22:36.12:572,36,0	1/1:1,16:16:27.04:401,27,0	1/1:2,2:4:9.02:123,9,0	1/1:2,12:12:21.07:336,21,0	0/0:21,0:21:51.11:0,51,776	1/1:0,12:12:18.06:286,18,0	0/0:30,0:30:75.03:0,75,1214	1/1:2,23:24:53.91:864,54,0	0/0:12,0:10:18.03:0,18,222	0/0:17,0:17:36.05:0,36,442	0/0:8,0:7:9.03:0,9,124	1/1:1,5:6:9.01:123,9,0	1/1:1,18:17:11.82:160,12,0	1/1:1,16:15:29.97:420,30,0	1/1:3,7:10:15.04:219,15,0	0/0:12,0:12:27.92:0,28,369	0/0:12,0:10:5.86:0,6,79	0/0:8,0:8:12.04:0,12,162
chr10	90174739	.	AGGCCC	A	1734.92	PASS	AC=40;AF=0.909;AN=44;BaseQRankSum=-2.489;DP=209;FS=71.890;HRun=0;HaplotypeScore=44.4312;InbreedingCoeff=0.3967;MQ=76.73;MQ0=18;MQRankSum=-3.093;QD=16.37;ReadPosRankSum=-0.384;VQSLOD=-0.1990;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:3.01:52,3,0	./.	0/0:42,0:17:41.88:0,42,687	0/0:52,0:12:22.19:0,22,333	./.	1/1:0,8:8:12.04:257,12,0	1/1:0,2:2:3.48:44,3,0	1/1:0,5:6:17.97:232,18,0	1/1:3,0:3:5.99:52,6,0	1/1:7,0:7:9.43:76,9,0	1/1:0,2:2:3.01:31,3,0	1/1:0,8:8:3.01:50,3,0	1/1:2,0:2:5.96:43,6,0	1/1:4,0:4:8.95:77,9,0	1/1:0,8:7:3.01:59,3,0	1/1:5,1:6:12.42:94,12,0	./.	1/1:2,0:2:3:26,3,0	1/1:0,6:6:18.04:240,18,0	./.	./.	1/1:2,0:2:5.98:54,6,0	1/1:0,7:7:3.01:41,3,0	1/1:4,0:4:5.94:44,6,0	1/1:10,0:9:17.95:147,18,0	1/1:1,5:4:12.04:167,12,0	1/1:3,2:4:2.60:66,3,0	./.
chr10	90174901	.	A	AG	117.14	PASS	AB=0.764;AC=18;AF=0.692;AN=26;BaseQRankSum=2.151;DP=118;FS=10.837;HRun=0;HaplotypeScore=30.5614;InbreedingCoeff=0.1549;MQ=68.15;MQ0=80;MQRankSum=-1.938;QD=1.92;ReadPosRankSum=2.522;VQSLOD=-0.2431;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:3:3.74:8,4,0	./.	0/0:9,0:4:2.25:0,2,56	0/0:12,0:6:0.69:0,1,22	0/1:2,1:2:10.95:11,0,13	./.	./.	./.	1/1:1,1:1:2.92:17,3,0	1/1:0,1:1:2.98:21,3,0	./.	1/1:0,1:1:2.94:18,3,0	./.	1/1:1,1:1:2.92:17,3,0	0/0:3,0:1:2.96:0,3,19	./.	1/1:7,2:3:5.85:35,6,0	0/1:5,2:3:2.83:27,0,3	./.	./.	./.	./.	1/1:1,1:1:2.92:17,3,0	1/1:20,3:4:7.70:41,8,0	./.	./.	./.	./.
chr10	90174903	.	A	AC	135.58	PASS	AC=18;AF=0.692;AN=26;BaseQRankSum=1.868;DP=119;FS=9.204;HRun=0;HaplotypeScore=30.5019;InbreedingCoeff=0.4494;MQ=67.87;MQ0=81;MQRankSum=-1.577;QD=2.66;ReadPosRankSum=3.276;VQSLOD=0.2569;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:3:8.39:0,8,39	./.	0/0:9,0:4:11.86:0,12,100	0/0:12,0:6:9.69:0,10,47	1/1:2,1:2:0.48:13,0,0	./.	./.	./.	1/1:1,1:1:2.94:18,3,0	1/1:0,1:1:2.98:21,3,0	./.	1/1:0,1:1:2.94:18,3,0	./.	1/1:1,1:1:2.88:15,3,0	0/0:3,0:1:2.96:0,3,19	./.	1/1:8,2:3:5.83:33,6,0	1/1:5,2:3:8.87:67,9,0	./.	./.	./.	./.	1/1:1,1:1:2.92:17,3,0	1/1:20,3:4:2.43:41,2,0	./.	./.	./.	./.
chr10	90175209	.	AG	A	3021.99	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-4.308;DP=267;FS=3.710;HRun=1;HaplotypeScore=43.9483;InbreedingCoeff=0.2445;MQ=66.89;MQ0=13;MQRankSum=-0.618;QD=13.55;ReadPosRankSum=-0.117;VQSLOD=2.4599;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,13:20:28.24:326,28,0	1/1:2,0:2:3.85:22,4,0	0/0:43,1:15:11.12:0,11,270	0/1:35,0:11:16.68:41,0,17	1/1:6,5:10:17.05:127,17,0	1/1:5,4:9:24.38:194,24,0	1/1:3,1:4:8.94:68,9,0	1/1:11,4:13:27.15:208,27,0	1/1:3,2:3:8.93:64,9,0	1/1:0,9:10:26.89:217,27,0	1/1:5,3:8:13.29:148,13,0	1/1:2,0:2:2.94:18,3,0	1/1:2,1:3:8.95:68,9,0	1/1:2,0:1:2.97:20,3,0	1/1:6,0:6:9.84:87,10,0	1/1:1,4:5:14.92:114,15,0	1/1:23,1:23:23.78:229,24,0	1/1:6,6:12:16.48:245,16,0	1/1:1,11:11:29.95:254,30,0	1/1:2,1:3:3:26,3,0	1/1:2,0:2:2.97:20,3,0	1/1:1,0:1:2.98:21,3,0	1/1:3,0:3:8.97:71,9,0	1/1:3,4:6:14.89:111,15,0	1/1:3,3:6:17.87:138,18,0	1/1:0,6:6:17.96:153,18,0	1/1:4,2:6:11.95:94,12,0	1/1:2,1:2:5.98:49,6,0
chr10	90175215	.	TTC	T	3175.70	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=-6.029;DP=270;FS=1.993;HRun=0;HaplotypeScore=46.1166;InbreedingCoeff=0.1624;MQ=69.26;MQ0=15;MQRankSum=-2.164;QD=14.24;ReadPosRankSum=-0.932;VQSLOD=3.1929;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:20,1:19:38.99:435,39,0	1/1:2,0:2:2.98:22,3,0	0/0:47,0:15:6.57:0,7,196	0/1:33,0:11:31.50:31,0,50	1/1:9,2:10:12.96:140,13,0	1/1:8,2:9:21.01:222,21,0	1/1:5,0:5:8.94:83,9,0	1/1:13,1:12:23.95:229,24,0	1/1:2,2:2:5.98:48,6,0	1/1:9,1:10:27.01:243,27,0	1/1:8,0:8:3.50:170,4,0	1/1:3,0:3:5.97:47,6,0	1/1:2,0:2:6.01:68,6,0	1/1:3,0:1:2.97:20,3,0	0/1:4,0:4:0.90:19,0,1	1/1:5,0:5:15.02:193,15,0	0/1:25,0:24:19.05:160,0,19	1/1:10,1:11:26.37:252,26,0	1/1:11,0:9:20.89:164,21,0	1/1:3,1:4:3.01:33,3,0	1/1:1,0:1:2.97:20,3,0	0/1:1,0:1:0:0,0,0	1/1:3,0:3:8.98:75,9,0	1/1:8,0:7:16.43:168,16,0	1/1:4,1:5:14.95:129,15,0	1/1:4,1:5:11.98:108,12,0	1/1:5,0:5:9.01:95,9,0	1/1:6,1:6:14.90:118,15,0
chr10	90175216	.	TC	T	3159.67	PASS	AB=0.974;AC=52;AF=0.963;AN=54;BaseQRankSum=-4.458;DP=264;FS=2.852;HRun=1;HaplotypeScore=43.6604;InbreedingCoeff=0.0981;MQ=69.62;MQ0=15;MQRankSum=-1.173;QD=11.97;ReadPosRankSum=0.343;VQSLOD=2.0098;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,11:19:44.01:388,44,0	1/1:1,0:1:2.98:22,3,0	0/1:47,0:15:0.92:1,0,138	0/1:34,2:11:23.99:24,0,25	1/1:10,1:10:21.36:150,21,0	1/1:7,1:7:20.98:185,21,0	1/1:4,1:5:8.94:70,9,0	1/1:10,3:11:26.91:221,27,0	1/1:4,0:2:5.98:48,6,0	1/1:10,0:10:27:238,27,0	1/1:4,3:7:14.66:149,15,0	1/1:3,0:3:5.97:47,6,0	1/1:1,1:2:6:55,6,0	1/1:3,0:1:2.97:20,3,0	1/1:4,0:4:8.01:54,8,0	1/1:1,4:5:14.99:137,15,0	1/1:23,1:24:48.89:306,49,0	1/1:9,3:12:28.51:256,29,0	1/1:9,1:8:20.97:187,21,0	1/1:1,3:4:3:27,3,0	1/1:1,0:1:2.97:20,3,0	./.	1/1:3,0:3:8.98:75,9,0	1/1:4,4:7:16.48:140,16,0	1/1:3,2:5:14.94:122,15,0	1/1:4,0:4:11.97:101,12,0	1/1:4,1:5:9:82,9,0	1/1:7,0:6:17.89:135,18,0
chr10	90176157	.	A	AG	1019.76	PASS	AB=0.987;AC=32;AF=0.593;AN=54;BaseQRankSum=3.781;DP=570;FS=25.847;HRun=0;HaplotypeScore=74.3177;InbreedingCoeff=-0.2965;MQ=26.29;MQ0=123;MQRankSum=-0.839;QD=2.31;ReadPosRankSum=5.041;VQSLOD=0.1458;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:17:13.33:44,0,13	1/1:4,0:4:1.48:15,1,0	0/0:64,0:2:5.93:0,6,40	./.	1/1:17,0:13:10.11:69,10,0	1/1:15,0:11:3.11:21,3,0	1/1:25,0:20:18.25:81,18,0	0/1:31,1:22:25.13:147,0,25	0/1:11,0:8:18.96:33,0,19	0/1:21,0:15:4.08:63,0,4	1/1:11,0:8:12.60:69,13,0	0/1:16,0:14:12.46:58,0,12	1/1:6,0:4:1.93:10,2,0	0/1:9,3:10:0.58:1,0,35	0/1:18,0:14:49.80:52,0,50	0/1:7,0:6:8.12:20,0,8	0/1:33,0:27:64.51:65,0,111	0/1:23,0:11:8.67:27,0,9	0/1:24,0:15:51.50:91,0,52	0/1:16,0:14:12.77:36,0,13	0/1:24,0:18:3.12:3,0,15	0/0:9,0:6:4.37:0,4,16	0/1:12,0:9:2.07:50,0,2	0/1:17,0:11:2.12:7,0,2	1/1:16,0:14:14.56:111,15,0	0/1:28,0:21:21.47:56,0,21	0/1:18,0:16:31.77:33,0,32	0/1:8,0:5:3.32:3,0,12
chr10	90176160	.	TACACACACACACACACAC	T	2539.51	PASS	AB=0.909;AC=17;AF=0.405;AN=42;BaseQRankSum=2.574;DP=507;FS=21.209;HRun=0;HaplotypeScore=116.4028;InbreedingCoeff=0.6239;MQ=26.71;MQ0=118;MQRankSum=-1.861;QD=20.48;ReadPosRankSum=1.861;VQSLOD=0.7538;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:16:15.05:0,15,676	0/0:5,0:5:4.43:0,4,376	0/0:64,0:2:2.84:0,3,14	./.	1/1:11,1:8:6.02:284,6,0	0/0:15,0:11:5.85:0,6,75	0/0:24,0:21:8.88:0,9,62	0/0:25,0:16:15.05:0,15,495	1/1:9,1:7:3.01:146,3,0	0/1:18,2:14:99:161,0,232	1/1:8,4:9:11.95:358,12,0	1/1:8,4:10:9.02:437,9,0	./.	./.	0/0:16,0:12:21.07:0,21,1354	./.	0/0:35,0:29:45.63:0,46,3097	1/1:14,4:9:3.01:146,3,0	0/0:18,0:10:18.06:0,18,399	0/0:6,0:8:9.02:0,9,174	./.	./.	1/1:8,3:8:2.99:146,3,0	1/1:11,3:9:6.02:287,6,0	1/1:9,6:13:15.05:729,15,0	0/0:21,0:16:26.12:0,26,718	0/0:12,0:11:12.04:0,12,344	./.
chr10	90176161	.	ACACAC	A	1089.95	PASS	AB=0.973;AC=23;AF=0.442;AN=52;BaseQRankSum=7.339;DP=506;FS=16.876;HRun=0;HaplotypeScore=69.5576;InbreedingCoeff=-0.1449;MQ=26.75;MQ0=118;MQRankSum=-0.333;QD=4.05;ReadPosRankSum=2.296;VQSLOD=0.2649;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:16:7.61:0,8,43	0/0:5,0:5:6.02:0,6,175	0/0:66,0:2:5.38:0,5,43	./.	0/1:10,0:7:9.04:78,0,9	0/1:11,4:11:13.69:57,0,14	0/1:25,1:22:99:162,0,114	0/0:24,0:15:32.68:0,33,251	0/1:9,0:6:11.05:33,0,11	0/1:20,0:14:24.62:25,0,130	0/1:11,0:8:22.71:65,0,23	1/1:11,0:10:0.01:104,0,0	./.	0/1:7,0:5:0:0,0,0	0/0:17,0:13:15.01:0,15,494	0/0:4,0:3:2.84:0,3,17	0/0:34,0:28:56.40:0,56,1271	0/1:18,0:9:15.96:29,0,16	0/1:19,0:10:59.52:60,0,92	1/1:10,0:8:11.83:191,12,0	0/1:23,0:17:0:0,0,0	1/1:6,0:3:2.22:7,2,0	0/1:11,0:8:11.66:30,0,12	1/1:15,0:10:6.01:77,6,0	0/1:15,0:13:14.98:169,0,15	0/1:22,0:16:59.02:59,0,157	0/1:12,1:11:59.73:87,0,60	0/1:6,0:3:0:0,0,0
chr10	90178444	.	TGG	T	3105.10	PASS	AC=34;AF=0.630;AN=54;BaseQRankSum=-3.253;DP=387;FS=1.602;HRun=11;HaplotypeScore=54.9071;InbreedingCoeff=0.8398;MQ=51.13;MQ0=31;MQRankSum=-0.597;QD=12.52;ReadPosRankSum=4.348;VQSLOD=1.2619;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,2:17:11.99:126,12,0	1/1:0,4:4:9.02:96,9,0	0/0:39,0:7:8.99:0,9,91	0/0:21,0:8:6.31:0,6,27	1/1:16,4:23:20.97:193,21,0	./.	0/0:5,0:11:9.25:0,9,90	0/0:9,0:7:8.59:0,9,111	1/1:3,2:15:20.85:164,21,0	1/1:6,10:16:10.27:234,10,0	1/1:5,6:11:9:94,9,0	1/1:4,9:18:29.97:278,30,0	1/1:6,1:12:17.66:134,18,0	1/1:3,3:8:11.88:94,12,0	1/1:6,8:14:35.91:346,36,0	1/1:2,2:11:14.61:102,15,0	1/1:8,21:27:36.03:371,36,0	1/1:4,8:17:35.90:332,36,0	0/0:11,0:13:27.04:0,27,306	0/0:2,0:3:3.01:0,3,33	0/0:3,0:9:0.47:0,0,1	1/1:2,7:11:26.98:261,27,0	1/1:5,4:11:23.99:227,24,0	1/1:4,8:16:17.74:151,18,0	1/1:4,1:10:11.92:96,12,0	0/0:6,0:12:18.36:0,18,225	0/0:3,0:5:12.02:0,12,120	0/0:7,0:5:9.03:0,9,127
chr10	90178454	.	GGT	G	703.87	PASS	AB=0.959;AC=20;AF=0.357;AN=56;BaseQRankSum=5.322;DP=371;FS=1.164;HRun=0;HaplotypeScore=57.2673;InbreedingCoeff=-0.0098;MQ=42.81;MQ0=38;MQRankSum=-0.370;QD=3.16;ReadPosRankSum=8.440;VQSLOD=0.6116;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,1:11:52.84:57,0,53	0/1:7,0:7:14.18:14,0,46	0/0:25,0:4:6.01:0,6,61	0/0:13,0:4:5.15:0,5,25	0/1:14,3:15:8.25:65,0,8	0/0:5,0:4:5.93:0,6,40	0/0:15,0:12:14.72:0,15,154	0/0:17,0:12:23.34:0,23,222	1/1:12,1:13:7.71:29,8,0	0/1:16,0:14:26.59:58,0,27	0/1:7,0:7:14.64:17,0,15	0/1:22,1:22:84.11:84,0,104	0/1:9,1:10:4.65:61,0,5	0/1:9,0:9:24.22:24,0,38	1/1:14,0:14:4.11:71,4,0	0/0:11,0:11:1.99:0,2,47	0/1:26,0:24:15.85:71,0,16	1/1:15,0:15:18.64:98,19,0	0/0:15,0:14:30.48:0,30,335	0/0:5,0:5:8.94:0,9,82	0/0:9,0:8:2.97:0,3,20	0/1:13,0:12:18.14:47,0,18	1/1:11,1:11:17.36:113,17,0	0/1:15,1:16:55.84:56,0,64	0/1:11,1:10:6.66:7,0,37	0/0:17,0:15:30.12:0,30,333	0/0:8,0:7:17.98:0,18,183	0/0:6,0:4:11.99:0,12,139
chr10	90178988	.	TA	T	3535.93	PASS	AB=0.875;AC=19;AF=0.339;AN=56;BaseQRankSum=13.650;DP=580;FS=3.589;HRun=13;HaplotypeScore=105.4376;InbreedingCoeff=0.8837;MQ=63.54;MQ0=1;MQRankSum=-0.216;QD=18.04;ReadPosRankSum=-2.442;VQSLOD=2.9658;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:41.71:0,42,370	0/1:6,1:7:6.89:7,0,102	0/0:26,0:20:6.77:0,7,94	0/0:13,0:8:3.53:0,4,22	0/0:27,0:28:44.11:0,44,570	1/1:0,18:18:53.69:393,54,0	1/1:3,11:14:32.75:236,33,0	1/1:6,27:33:80.42:580,80,0	0/0:18,0:18:34.93:0,35,337	0/0:29,2:31:36.03:0,36,658	0/0:28,2:30:19.28:0,19,510	0/0:22,5:28:16.09:0,16,457	0/0:12,0:12:30.02:0,30,284	0/0:19,0:19:38.97:0,39,362	0/0:24,1:25:36.42:0,36,501	0/0:24,0:24:57.07:0,57,544	0/0:23,2:25:19.26:0,19,501	0/0:31,0:31:63.68:0,64,759	1/1:2,20:22:59.63:434,60,0	1/1:5,16:21:47.71:350,48,0	1/1:1,7:8:17.89:131,18,0	0/0:8,0:8:12.02:0,12,117	0/0:23,0:24:41.90:0,42,394	0/0:9,0:9:24.04:0,24,234	0/0:14,2:15:14.12:0,14,292	1/1:2,22:24:62.58:459,63,0	1/1:4,31:36:94.49:683,94,0	1/1:1,12:13:35.80:262,36,0
chr10	90184472	.	CT	C	2543.61	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.461;DP=747;FS=1.508;HRun=2;HaplotypeScore=72.1067;InbreedingCoeff=0.9992;MQ=83.41;MQ0=0;MQRankSum=-1.370;QD=31.80;ReadPosRankSum=0.849;VQSLOD=3.4064;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,1864	1/1:0,13:13:33.09:428,33,0	0/0:17,0:17:41.20:0,41,530	0/0:27,0:27:72.13:0,72,925	0/0:17,0:17:48.16:0,48,719	0/0:24,0:24:72.24:0,72,1077	0/0:39,0:39:99:0,114,1677	0/0:30,0:30:84.27:0,84,1224	0/0:26,0:26:78.24:0,78,1143	0/0:29,0:29:84.28:0,84,1235	0/0:16,0:16:48.16:0,48,719	0/0:37,0:37:99:0,111,1620	0/0:26,0:26:78.26:0,78,1169	0/0:35,0:35:93.29:0,93,1355	1/1:0,31:31:84.27:1090,84,0	0/0:32,0:32:96.31:0,96,1420	1/1:0,36:36:90.29:1168,90,0	0/0:28,0:28:84.20:0,84,1188	0/0:18,0:18:51.10:0,51,682	0/0:19,0:19:54.15:0,54,751	0/0:43,0:43:99:0,126,1883	0/0:16,0:16:48.16:0,48,718	0/0:18,0:18:51.15:0,51,724	0/0:44,0:44:99:0,132,1954	0/0:24,0:24:72.24:0,72,1061	0/0:24,0:24:72.24:0,72,1062	0/0:28,0:28:84.27:0,84,1236	0/0:8,0:8:24.08:0,24,360
chr10	90186683	.	GTTTC	G	7990.28	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=9.087;DP=632;FS=4.614;HRun=0;HaplotypeScore=116.2408;InbreedingCoeff=0.9925;MQ=68.34;MQ0=2;MQRankSum=-3.903;QD=39.75;ReadPosRankSum=-1.270;VQSLOD=4.8940;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.20:0,78,1879	0/0:5,0:5:12.02:0,12,205	0/0:26,0:18:38.93:0,39,666	0/0:27,0:18:15.56:0,16,433	0/0:20,0:20:51.16:0,51,1250	1/1:2,12:14:39.13:683,39,0	1/1:8,13:20:48.16:835,48,0	1/1:7,24:31:75.11:1064,75,0	0/0:19,0:19:51.13:0,51,1119	0/0:28,0:28:75.25:0,75,1800	0/0:13,0:13:36.12:0,36,889	0/0:35,0:35:81.24:0,81,1884	0/0:21,0:21:51.17:0,51,1203	0/0:25,0:25:63.19:0,63,1500	0/0:13,0:13:27.08:0,27,636	0/0:24,0:24:66.20:0,66,1501	0/0:38,0:38:99:0,99,2259	0/0:25,0:25:51.16:0,51,1189	1/1:3,12:13:33.10:529,33,0	1/1:2,21:23:59.86:888,60,0	1/1:16,23:39:84.22:1377,84,0	0/0:23,0:23:63.13:0,63,1542	0/0:14,0:14:32.98:0,33,707	0/0:33,0:33:81.28:0,81,1991	0/0:13,0:13:30.10:0,30,654	1/1:7,16:23:63.18:985,63,0	1/1:7,18:25:69.17:1104,69,0	1/1:0,10:10:30.10:525,30,0
chr10	90186716	.	CTCCCT	C	678.20	PASS	AB=0.899;AC=6;AF=0.107;AN=56;BaseQRankSum=1.030;DP=770;FS=0.639;HRun=0;HaplotypeScore=202.0505;InbreedingCoeff=-0.1010;MQ=55.27;MQ0=19;MQRankSum=-3.518;QD=3.94;ReadPosRankSum=-6.587;VQSLOD=0.3905;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:35:59:0,59,1243	0/1:1,3:4:12.77:188,0,13	0/0:36,0:17:47.89:0,48,701	0/0:31,0:14:38.54:0,39,696	0/0:20,0:20:50.01:0,50,1132	0/0:19,0:19:51.02:0,51,946	0/1:26,7:32:99:106,0,1391	0/0:33,0:32:92.66:0,93,1501	0/0:18,0:18:50.59:0,51,1340	0/1:30,0:30:99:178,0,1424	0/0:14,0:14:36.12:0,36,877	0/0:37,0:35:76.30:0,76,1600	0/0:28,0:26:57.50:0,58,1234	0/0:34,0:32:63.77:0,64,1490	0/0:25,0:24:61.36:0,61,1180	0/0:27,0:26:60.98:0,61,1517	0/1:41,0:41:99:282,0,1356	0/0:30,0:30:62.22:0,62,1238	0/0:25,0:20:22.68:0,23,857	0/1:23,0:23:36.10:36,0,1194	0/0:54,0:53:99:0,130,2512	0/0:26,0:26:72.31:0,72,1516	0/0:18,0:18:45.15:0,45,802	0/1:41,0:41:10.45:10,0,1803	0/0:18,0:17:27.45:0,27,580	0/0:26,0:26:67.76:0,68,1539	0/0:31,0:30:80.29:0,80,1773	0/0:13,0:12:18.10:0,18,672
chr10	90186721	.	T	TTTCC	13540.21	PASS	AB=0.820;AC=44;AF=0.846;AN=52;BaseQRankSum=-6.649;DP=789;FS=2.586;HRun=0;HaplotypeScore=146.9403;InbreedingCoeff=0.5647;MQ=55.02;MQ0=17;MQRankSum=1.126;QD=20.21;ReadPosRankSum=-0.114;VQSLOD=4.7928;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:36:17.41:0,17,264	0/0:3,0:3:3.74:0,4,10	./.	./.	1/1:10,10:20:30.10:674,30,0	1/1:9,10:19:24.08:530,24,0	1/1:32,0:31:13.61:158,14,0	1/1:36,0:35:11.95:163,12,0	0/0:18,0:18:24.08:0,24,372	1/1:21,0:32:32.64:373,33,0	1/1:8,0:16:8.94:94,9,0	0/1:19,16:34:53.87:723,0,54	1/1:17,14:30:30.10:697,30,0	1/1:13,21:33:48.16:1125,48,0	1/1:10,17:27:51.17:1191,51,0	1/1:15,13:28:7.23:679,7,0	1/1:41,0:41:6.66:228,7,0	1/1:13,20:33:15.20:822,15,0	0/1:23,1:19:37.45:132,0,37	1/1:20,4:24:30.09:599,30,0	1/1:27,27:54:27.31:1105,27,0	1/1:9,16:25:36.12:827,36,0	1/1:6,12:19:30.57:706,31,0	1/1:20,22:44:48.10:1075,48,0	1/1:6,0:19:14.94:181,15,0	1/1:17,7:25:24.08:545,24,0	1/1:20,10:31:30.10:702,30,0	1/1:11,2:12:9.03:211,9,0
chr10	90188959	.	T	TGGGGA	12988.51	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-12.851;DP=515;FS=4.647;HRun=0;HaplotypeScore=86.8616;InbreedingCoeff=0.9525;MQ=72.80;MQ0=0;MQRankSum=-4.184;QD=53.01;ReadPosRankSum=6.199;VQSLOD=4.4988;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,23:29:53.96:1342,54,0	0/0:6,0:6:15.05:0,15,306	0/0:14,0:14:32.26:0,32,555	0/0:11,0:11:23.10:0,23,353	1/1:2,6:8:6.02:182,6,0	0/0:18,0:18:45.14:0,45,809	0/0:26,0:26:66.20:0,66,1252	0/0:23,0:23:60.17:0,60,1030	1/1:4,9:15:14.89:456,15,0	1/1:4,6:12:18.04:480,18,0	1/1:0,3:4:5.98:111,6,0	1/1:7,23:30:54.19:1634,54,0	1/1:1,16:18:39.13:1185,39,0	1/1:5,16:25:45.15:1359,45,0	0/0:19,0:19:50.94:0,51,1017	1/1:2,16:19:45.15:1371,45,0	0/0:37,0:37:99:0,108,2086	1/1:6,31:38:78.27:2375,78,0	0/0:23,0:23:63.18:0,63,1096	0/0:6,0:6:14.94:0,15,261	0/0:37,0:37:93.23:0,93,1805	1/1:0,5:7:9.03:266,9,0	1/1:1,7:9:18.01:474,18,0	1/1:2,17:20:39.07:1114,39,0	1/1:1,10:11:21.07:639,21,0	0/0:19,0:19:47.93:0,48,850	0/0:25,0:25:72.09:0,72,1172	0/0:6,0:6:18.06:0,18,354
chr10	90190893	.	TAA	T	4643.44	PASS	AB=0.880;AC=25;AF=0.446;AN=56;BaseQRankSum=5.385;DP=510;FS=1.185;HRun=13;HaplotypeScore=76.2319;InbreedingCoeff=0.9280;MQ=86.94;MQ0=1;MQRankSum=-1.461;QD=20.55;ReadPosRankSum=2.705;VQSLOD=4.5803;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:35:88.60:0,89,1157	1/1:1,3:4:2.95:29,3,0	0/0:35,0:31:50.77:0,51,593	0/1:19,0:20:1.34:1,0,191	0/0:11,0:15:38.54:0,39,452	1/1:5,15:20:42.03:407,42,0	1/1:0,23:24:62.84:594,63,0	1/1:5,22:29:68.47:624,68,0	0/0:18,0:18:47.63:0,48,631	0/0:17,0:17:33.10:0,33,460	0/0:10,0:10:27.09:0,27,390	0/0:31,0:33:81.61:0,82,1082	0/0:17,0:17:42.12:0,42,574	0/0:14,0:15:38.60:0,39,509	1/1:1,17:19:45:486,45,0	0/0:14,0:15:29.59:0,30,394	1/1:1,14:18:41.48:422,41,0	0/0:13,0:14:42.14:0,42,593	1/1:4,16:20:45.01:436,45,0	1/1:0,8:8:24.04:231,24,0	1/1:1,16:17:42.06:407,42,0	0/0:14,0:16:35.09:0,35,447	0/0:11,0:12:33.10:0,33,459	0/0:20,1:22:30.58:0,31,759	0/0:10,0:10:24.07:0,24,329	1/1:2,24:26:69:656,69,0	1/1:5,10:15:23.98:233,24,0	1/1:0,4:4:12.02:116,12,0
chr10	90193664	.	A	ACAC	1468.48	PASS	AB=0.592;AC=19;AF=0.339;AN=56;BaseQRankSum=-3.198;DP=430;FS=2.576;HRun=0;HaplotypeScore=103.1245;InbreedingCoeff=-0.0336;MQ=76.10;MQ0=2;MQRankSum=-1.516;QD=6.33;ReadPosRankSum=2.855;VQSLOD=2.4737;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:28:57.08:1261,57,0	0/1:2,0:7:4.82:5,0,13	0/0:15,0:13:22.42:0,22,282	0/0:11,0:11:14.79:0,15,245	0/0:4,0:18:38.23:0,38,190	0/1:3,0:22:28.72:29,0,41	0/1:7,0:18:43.92:44,0,111	0/1:7,0:13:66.19:66,0,114	0/1:2,0:7:18.94:19,0,56	0/0:5,0:10:19.94:0,20,164	0/0:2,0:12:22.22:0,22,107	0/0:7,0:20:30.26:0,30,149	0/0:2,0:14:23.59:0,24,126	0/0:0,0:14:21.35:0,21,63	0/1:3,0:13:22.47:22,0,52	0/1:2,0:14:13.16:13,0,56	0/1:15,0:24:47.45:47,0,58	0/0:4,0:26:44.39:0,44,266	0/1:2,0:11:32.62:38,0,33	0/1:5,0:15:3.78:4,0,110	0/1:5,0:14:2.37:2,0,95	0/1:0,0:11:11.53:12,0,64	0/0:1,0:11:20.68:0,21,61	0/0:1,0:26:38.34:0,38,130	0/0:5,0:21:31.93:0,32,134	1/1:2,0:11:1.34:25,1,0	0/1:5,0:14:10.11:10,0,54	1/1:1,0:9:10.10:36,10,0
chr10	90194167	.	TG	T	7153.99	PASS	AB=0.880;AC=29;AF=0.518;AN=56;BaseQRankSum=6.894;DP=548;FS=15.874;HRun=9;HaplotypeScore=64.0390;InbreedingCoeff=0.8516;MQ=66.40;MQ0=0;MQRankSum=-0.224;QD=21.81;ReadPosRankSum=4.305;VQSLOD=4.0812;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,39:41:99:1015,111,0	0/0:5,0:7:10.88:0,11,58	0/0:6,0:5:6.01:0,6,68	0/0:4,0:4:5.96:0,6,43	1/1:3,13:16:36.01:329,36,0	0/0:19,0:19:51.15:0,51,589	0/0:25,0:25:66.18:0,66,751	0/0:17,1:18:2.62:0,3,280	1/1:4,15:19:51.02:466,51,0	1/1:6,7:13:23.96:214,24,0	1/1:6,11:17:35.97:322,36,0	1/1:2,32:34:99:906,99,0	1/1:3,16:19:48.02:439,48,0	1/1:3,22:25:75.04:686,75,0	0/0:3,0:18:37.09:0,37,199	1/1:2,27:29:75.04:685,75,0	0/0:10,0:26:37.24:0,37,209	1/1:2,19:21:57.03:522,57,0	0/1:18,3:22:34.07:34,0,371	0/0:18,0:18:45.12:0,45,511	0/0:32,0:32:84.24:0,84,960	1/1:2,9:11:18.01:165,18,0	1/1:4,13:17:32.64:301,33,0	1/1:1,21:22:57.03:521,57,0	1/1:1,21:22:60.03:549,60,0	0/0:11,1:12:5.64:0,6,319	0/0:17,0:19:53.75:0,54,557	0/0:16,0:16:38.97:0,39,420
chr10	90196464	.	CT	C	1834.12	PASS	AB=0.775;AC=25;AF=0.446;AN=56;BaseQRankSum=3.662;DP=487;FS=3.103;HRun=14;HaplotypeScore=60.9121;InbreedingCoeff=0.4514;MQ=68.67;MQ0=3;MQRankSum=-0.318;QD=7.28;ReadPosRankSum=2.960;VQSLOD=2.7244;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:39.79:0,40,486	1/1:3,5:9:16.89:108,17,0	0/1:16,1:10:6.59:7,0,40	0/0:14,0:10:2.23:0,2,42	0/1:13,5:18:82.59:83,0,91	0/1:2,12:17:8.53:143,0,9	1/1:4,11:15:1.91:157,2,0	1/1:11,6:20:35.68:213,36,0	0/0:17,0:21:34.49:0,34,272	0/0:20,0:21:17.64:0,18,185	0/0:16,1:17:12.43:0,12,249	0/0:25,0:26:40.22:0,40,472	0/0:16,0:16:3.36:0,3,159	0/0:22,0:23:14.42:0,14,372	1/1:4,9:14:16.74:108,17,0	0/0:23,1:24:45.97:0,46,428	1/1:7,14:22:25.77:170,26,0	0/0:22,2:26:16.40:0,16,392	0/1:12,10:22:29.87:140,0,30	1/1:4,9:13:23.76:164,24,0	1/1:3,13:18:11.95:210,12,0	0/0:10,0:10:24.03:0,24,222	0/1:12,1:14:8.69:9,0,177	0/1:10,2:12:9.44:9,0,174	0/0:8,0:9:14.12:0,14,151	1/1:3,9:12:26.76:185,27,0	1/1:2,16:20:39.65:256,40,0	0/1:4,4:8:5.31:67,0,5
chr10	90201856	.	TCTTTCTCTCTTTCTTTCTTC	T	16034.95	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-0.324;DP=550;FS=8.854;HRun=0;HaplotypeScore=300.0763;InbreedingCoeff=0.8635;MQ=69.31;MQ0=7;MQRankSum=2.550;QD=35.95;ReadPosRankSum=3.950;VQSLOD=2.1334;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:32.19:0,32,858	0/0:6,0:6:15.05:0,15,280	0/0:24,0:15:24.21:0,24,330	0/1:15,0:10:5.56:6,0,67	1/1:22,0:22:55.20:871,55,0	1/1:13,0:13:39.10:589,39,0	1/1:21,0:21:55.34:838,55,0	1/1:20,0:18:42.11:571,42,0	1/1:17,0:17:11.99:553,12,0	1/1:21,0:20:60.02:899,60,0	1/1:12,0:11:9:234,9,0	1/1:17,0:16:4.72:558,5,0	1/1:9,0:9:24.06:333,24,0	1/1:19,0:19:23.73:668,24,0	0/0:20,0:20:54:0,54,770	1/1:10,0:10:30.08:446,30,0	0/0:30,0:30:71.41:0,71,993	1/1:22,0:22:56.53:835,57,0	1/1:7,16:22:54.13:861,54,0	1/1:19,0:19:54.17:850,54,0	1/1:29,0:29:72.23:1217,72,0	1/1:25,0:25:22.52:837,23,0	1/1:16,0:16:28.72:574,29,0	1/1:19,0:19:41.42:648,41,0	1/1:15,0:15:42.11:640,42,0	1/1:7,31:38:87.25:1381,87,0	1/1:18,0:18:51.12:852,51,0	1/1:26,0:26:51.13:773,51,0
chr10	90203150	.	T	TTGGG	10003.84	PASS	AB=0.929;AC=52;AF=0.963;AN=54;BaseQRankSum=2.749;DP=248;FS=0.000;HRun=0;HaplotypeScore=334.4363;InbreedingCoeff=-0.0552;MQ=43.31;MQ0=0;MQRankSum=-2.451;QD=40.34;ReadPosRankSum=1.243;VQSLOD=3.9829;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:13:37.08:490,37,0	1/1:1,0:4:12.03:162,12,0	./.	0/1:5,1:4:25.12:90,0,25	1/1:1,0:8:21.96:316,22,0	1/1:1,0:11:30.10:456,30,0	1/1:6,0:7:3.01:45,3,0	0/1:3,0:3:9.98:50,0,10	1/1:1,0:9:27.09:463,27,0	1/1:0,0:9:25.33:417,25,0	1/1:0,0:6:18.06:268,18,0	1/1:1,0:14:42.14:627,42,0	1/1:3,0:10:30.10:495,30,0	1/1:0,0:14:42.14:600,42,0	1/1:2,0:16:39.89:649,40,0	1/1:3,0:13:39.13:632,39,0	1/1:0,0:9:27.08:390,27,0	1/1:1,0:4:9.03:155,9,0	1/1:0,0:1:3.01:51,3,0	1/1:3,0:14:38.82:492,39,0	1/1:6,0:14:30.94:505,31,0	1/1:0,0:9:27.09:412,27,0	1/1:1,0:13:38.97:493,39,0	1/1:2,0:9:18.01:216,18,0	1/1:1,0:9:27.09:440,27,0	1/1:0,0:11:32.90:492,33,0	1/1:2,0:6:18.06:299,18,0	1/1:0,0:6:18.06:298,18,0
chr10	90205177	.	ATT	A	20507.92	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=9.768;DP=633;FS=11.325;HRun=3;HaplotypeScore=97.0474;InbreedingCoeff=0.9759;MQ=100.95;MQ0=0;MQRankSum=-7.970;QD=42.90;ReadPosRankSum=4.927;VQSLOD=3.5243;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:99:1516,99,0	0/0:16,0:16:48.16:0,48,924	0/0:41,0:42:99:0,120,2241	0/0:30,0:30:84.28:0,84,1593	1/1:0,22:22:63.21:965,63,0	1/1:0,21:21:60.20:919,60,0	1/1:0,15:15:42.14:643,42,0	1/1:2,28:30:84.27:1265,84,0	1/1:2,18:20:48.16:735,48,0	1/1:1,27:28:81.27:1238,81,0	1/1:1,12:13:36.12:551,36,0	1/1:0,28:28:81.28:1240,81,0	1/1:1,12:13:36.12:551,36,0	1/1:0,28:28:66.22:1011,66,0	0/0:34,0:34:99:0,102,1856	1/1:0,24:24:69.23:1055,69,0	0/0:33,0:33:99:0,99,1877	1/1:1,27:28:81.28:1241,81,0	1/1:0,20:20:60.20:916,60,0	1/1:0,16:16:48.16:735,48,0	1/1:1,15:16:45.15:689,45,0	1/1:0,19:19:57.19:873,57,0	1/1:0,16:16:45.15:689,45,0	1/1:0,18:18:51.17:781,51,0	1/1:0,17:17:51.17:781,51,0	1/1:0,28:28:81.27:1241,81,0	1/1:3,17:20:51.17:781,51,0	1/1:0,2:2:6.02:92,6,0
chr10	90210710	.	CTG	C	13573.07	PASS	AB=0.909;AC=47;AF=0.839;AN=56;BaseQRankSum=5.079;DP=449;FS=41.153;HRun=0;HaplotypeScore=66.0389;InbreedingCoeff=0.8559;MQ=90.71;MQ0=1;MQRankSum=-5.469;QD=36.98;ReadPosRankSum=4.322;VQSLOD=3.2392;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:48.16:688,48,0	0/1:9,1:10:15.78:16,0,409	0/0:18,0:18:54.15:0,54,893	0/0:20,0:20:51.60:0,52,828	1/1:2,15:17:29.97:360,30,0	1/1:1,10:11:30.10:430,30,0	1/1:1,25:26:75.25:1073,75,0	1/1:0,16:16:45.15:645,45,0	1/1:0,16:16:48.16:688,48,0	1/1:0,14:14:39.13:558,39,0	1/1:0,10:10:29.84:291,30,0	1/1:0,20:20:57.19:817,57,0	1/1:0,13:13:39.13:558,39,0	1/1:0,13:13:36.12:515,36,0	0/0:13,0:13:36.12:0,36,660	1/1:1,9:10:27.09:387,27,0	0/0:31,0:31:87.27:0,87,1560	1/1:0,27:27:72.24:1031,72,0	1/1:3,12:15:36.12:516,36,0	1/1:0,9:9:27.09:378,27,0	1/1:1,28:29:84.17:1176,84,0	1/1:0,9:9:26.96:337,27,0	1/1:1,8:9:21.03:277,21,0	1/1:1,17:18:48.16:687,48,0	1/1:2,13:15:39.13:557,39,0	1/1:0,19:19:57.19:814,57,0	1/1:1,17:18:45.15:645,45,0	1/1:0,3:3:9.03:129,9,0
chr10	90210994	.	G	GCAGGCGGATCTCT	36702.96	PASS	AB=0.677;AC=49;AF=0.875;AN=56;BaseQRankSum=-3.919;DP=584;FS=2.273;HRun=0;HaplotypeScore=167.3282;InbreedingCoeff=0.6935;MQ=46.49;MQ0=1;MQRankSum=-6.741;QD=73.26;ReadPosRankSum=-0.322;VQSLOD=4.8440;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:54.19:0,54,2023	1/1:5,4:11:21.07:1030,21,0	0/0:22,0:12:18.06:0,18,577	0/0:25,0:21:39.05:0,39,945	1/1:8,11:19:15.05:957,15,0	1/1:22,13:35:36.12:1973,36,0	1/1:14,15:29:33.11:1904,33,0	1/1:23,0:24:41.91:1393,42,0	1/1:7,13:24:39.13:2462,39,0	1/1:5,8:14:33.06:1828,33,0	1/1:9,9:18:12.04:766,12,0	1/1:20,11:32:51.18:3115,51,0	1/1:11,14:26:48.12:2561,48,0	1/1:10,12:23:45.15:2708,45,0	1/1:6,9:16:21.07:1299,21,0	1/1:8,13:21:39.13:2371,39,0	0/1:11,9:20:52.09:2048,0,52	1/1:11,8:21:27.09:1458,27,0	1/1:8,5:14:30.10:1480,30,0	1/1:8,1:10:12.04:562,12,0	1/1:22,0:22:5.81:303,6,0	1/1:8,4:12:15.05:915,15,0	1/1:6,4:13:9.03:575,9,0	1/1:8,9:17:3.01:183,3,0	1/1:12,13:27:27.09:1519,27,0	1/1:17,10:28:54.09:2398,54,0	1/1:10,7:17:12.51:511,13,0	1/1:2,4:6:6.02:384,6,0
chr10	90214302	.	CTTG	C	23827.99	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=11.605;DP=720;FS=5.731;HRun=0;HaplotypeScore=117.7601;InbreedingCoeff=0.9996;MQ=87.07;MQ0=0;MQRankSum=-7.940;QD=40.73;ReadPosRankSum=4.898;VQSLOD=6.3128;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:42:99:1761,108,0	0/0:13,0:13:36.12:0,36,797	0/0:26,0:26:72.24:0,72,1534	0/0:30,0:30:74.88:0,75,1483	1/1:1,25:26:59.57:970,60,0	1/1:2,24:26:72.25:1174,72,0	1/1:2,24:26:57.19:930,57,0	1/1:6,22:28:66.22:1043,66,0	1/1:0,30:30:84.29:1361,84,0	1/1:1,24:25:69.22:1104,69,0	1/1:3,15:18:36.12:583,36,0	1/1:1,33:34:87.30:1418,87,0	1/1:0,28:28:69.24:1124,69,0	1/1:0,31:31:84.29:1367,84,0	0/0:40,0:40:99:0,114,2465	1/1:1,27:28:72.25:1176,72,0	0/0:26,0:26:72.25:0,72,1603	1/1:0,17:17:48.16:772,48,0	1/1:3,18:21:51.16:803,51,0	1/1:1,23:24:57.19:924,57,0	1/1:1,24:25:56.69:927,57,0	1/1:1,22:23:50.86:825,51,0	1/1:1,10:12:33.11:533,33,0	1/1:0,30:30:78.16:1271,78,0	1/1:0,19:19:45.15:732,45,0	1/1:3,31:34:87.30:1418,87,0	1/1:1,27:29:71.94:1173,72,0	1/1:0,9:9:27.09:441,27,0
chr10	90217465	.	AGTCTAGCAAGCACAG	A	1857.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.511;DP=735;FS=2.177;HRun=0;HaplotypeScore=284.8461;InbreedingCoeff=0.9988;MQ=87.42;MQ0=1;MQRankSum=-6.588;QD=48.87;ReadPosRankSum=0.786;VQSLOD=3.0734;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,28:37:45.11:1952,45,0	0/0:9,0:9:27.09:0,27,1695	0/0:34,0:34:96.33:0,96,5782	0/0:31,0:31:84.29:0,84,5116	0/0:28,0:28:84.26:0,84,5518	0/0:24,0:23:69.24:0,69,4769	0/0:23,0:23:69.24:0,69,4983	0/0:43,0:43:99:0,126,8049	0/0:16,0:16:48.16:0,48,3246	0/0:27,0:27:78.27:0,78,5530	0/0:23,0:23:63.20:0,63,3836	0/0:20,0:20:57.20:0,57,4068	0/0:19,0:19:57.18:0,57,3964	0/0:23,0:23:69.24:0,69,4832	0/0:40,0:40:99:0,114,7783	0/0:37,0:37:99:0,111,6975	0/0:23,0:23:66.20:0,66,4192	0/0:21,0:21:60.21:0,60,3979	0/0:18,0:18:54.19:0,54,3462	0/0:22,0:22:66.23:0,66,4275	0/0:40,0:40:99:0,120,8611	0/0:23,0:23:63.20:0,63,4218	0/0:16,0:16:45.14:0,45,2975	0/0:24,0:24:69.24:0,69,4676	0/0:28,0:28:81.26:0,81,5693	0/0:37,0:37:99:0,99,6714	0/0:35,0:35:99:0,105,6872	0/0:13,0:13:36.12:0,36,2683
chr10	90218080	.	G	GT	27475.66	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-13.931;DP=810;FS=3.128;HRun=1;HaplotypeScore=67.5082;InbreedingCoeff=1.0000;MQ=87.32;MQ0=0;MQRankSum=-8.305;QD=40.11;ReadPosRankSum=3.271;VQSLOD=5.6575;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,53:55:99:2133,144,0	0/0:15,0:15:42.11:0,42,526	0/0:28,0:28:84.25:0,84,1060	0/0:25,0:25:69.21:0,69,856	1/1:0,28:28:81.19:1163,81,0	1/1:1,21:22:54.18:809,54,0	1/1:0,25:25:69.23:1034,69,0	1/1:2,28:30:84.24:1196,84,0	1/1:2,26:28:72.18:1051,72,0	1/1:0,42:42:99:1747,123,0	1/1:0,26:26:72.24:1079,72,0	1/1:0,32:32:90.30:1348,90,0	1/1:0,30:30:84.28:1259,84,0	1/1:0,24:24:63.21:944,63,0	0/0:37,0:37:99:0,108,1402	1/1:0,39:39:99:1619,108,0	0/0:20,0:20:60.17:0,60,763	1/1:2,29:31:78.26:1169,78,0	1/1:4,16:20:51.12:720,51,0	1/1:1,28:29:84.28:1259,84,0	1/1:3,51:54:99:2203,147,0	1/1:3,24:27:72.24:1079,72,0	1/1:0,23:23:57.19:854,57,0	1/1:0,30:30:78.26:1169,78,0	1/1:0,16:16:42.14:630,42,0	1/1:0,28:28:84.28:1259,84,0	1/1:1,29:30:78.23:1169,78,0	1/1:1,15:16:39.13:584,39,0
chr10	90219950	.	G	GAACTCACA	4533.10	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-3.517;DP=455;FS=2.409;HRun=0;HaplotypeScore=229.5504;InbreedingCoeff=0.1571;MQ=46.42;MQ0=11;MQRankSum=0.354;QD=10.37;ReadPosRankSum=-4.070;VQSLOD=3.2619;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:16.91:98,0,17	1/1:5,0:5:11.94:154,12,0	0/1:31,0:6:2.69:3,0,103	0/1:33,0:14:62.38:120,0,62	1/1:17,0:16:15.19:91,15,0	0/1:16,0:16:16.05:137,0,16	0/1:13,0:13:53.57:161,0,54	1/1:25,0:25:29.45:179,29,0	1/1:11,0:10:15.30:184,15,0	1/1:21,0:19:25.13:496,25,0	1/1:10,0:10:17.74:118,18,0	1/1:5,0:3:2.98:21,3,0	1/1:22,0:20:32.21:299,32,0	1/1:10,0:10:5.09:39,5,0	1/1:21,3:26:35.66:234,36,0	1/1:11,0:10:20.86:307,21,0	1/1:28,1:27:40.11:692,40,0	1/1:3,0:3:2.99:23,3,0	0/1:13,0:13:28.18:28,0,161	1/1:18,0:18:27.34:249,27,0	1/1:14,0:13:12.32:79,12,0	1/1:19,0:19:40.87:349,41,0	1/1:8,0:8:11.80:77,12,0	1/1:15,0:14:5.89:24,6,0	1/1:18,0:18:32.89:193,33,0	0/0:16,0:16:22.66:0,23,345	0/1:25,0:25:99:180,0,162	0/0:2,0:2:6.02:0,6,83
chr10	90219954	.	TCACACA	T	1136.90	PASS	AB=0.943;AC=18;AF=0.333;AN=54;BaseQRankSum=1.225;DP=464;FS=1.098;HRun=0;HaplotypeScore=194.6384;InbreedingCoeff=0.4738;MQ=45.49;MQ0=16;MQRankSum=-2.716;QD=7.11;ReadPosRankSum=1.705;VQSLOD=2.7822;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:2.97:20,3,0	0/0:6,0:6:6.01:0,6,103	0/0:31,0:6:2.94:0,3,18	0/0:31,0:12:0.47:0,0,1	0/0:18,0:16:3.01:0,3,72	1/1:7,7:15:3.01:55,3,0	1/1:10,3:13:6.02:115,6,0	0/0:23,0:23:0:0,0,0	0/1:12,0:11:0:0,0,0	0/0:21,0:19:45.15:0,45,988	0/0:10,0:9:3.01:0,3,75	0/1:6,0:4:0:0,0,0	0/1:24,0:22:2.34:2,0,67	0/0:12,0:12:3.01:0,3,50	0/0:30,0:29:15.37:0,15,211	0/0:11,0:10:0.31:0,0,1	0/0:31,0:29:6.49:0,6,159	0/0:3,0:3:3:0,3,28	1/1:9,2:13:12.04:211,12,0	0/1:12,3:17:0:0,0,0	0/0:13,2:13:0.94:0,1,1	0/0:20,0:20:3.45:0,3,76	./.	0/0:14,0:13:3.01:0,3,72	0/0:19,0:19:9.01:0,9,121	1/1:9,3:16:24.08:452,24,0	1/1:12,6:22:18.06:318,18,0	1/1:1,1:2:6.02:104,6,0
chr10	90219982	.	A	ACT	178.68	PASS	AB=1.000;AC=17;AF=0.340;AN=50;BaseQRankSum=2.949;DP=473;FS=4.289;HRun=0;HaplotypeScore=154.7617;InbreedingCoeff=0.2490;MQ=31.19;MQ0=61;MQRankSum=-0.392;QD=0.94;ReadPosRankSum=-1.477;VQSLOD=2.3086;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:0:0,0,0	1/1:7,0:7:2.08:25,2,0	0/1:23,0:1:0:0,0,0	./.	0/0:16,0:13:2.99:0,3,24	1/1:17,0:11:0.01:8,0,0	0/0:34,0:28:5.24:0,5,25	0/0:18,0:10:22.61:0,23,148	1/1:13,0:12:2.69:19,3,0	0/1:21,0:19:20.14:20,0,240	0/0:7,0:6:3:0,3,25	0/0:7,0:5:2.84:0,3,15	1/1:17,0:15:11.07:51,11,0	0/0:11,0:11:2.57:0,3,24	0/1:35,0:34:11.09:136,0,11	0/1:11,0:9:0.26:0,0,0	0/0:18,13:32:1.53:0,2,47	0/1:4,0:3:11.60:12,0,15	0/0:17,0:15:44.40:0,44,326	1/1:13,0:11:8.23:36,8,0	./.	0/0:18,0:18:2.72:0,3,25	./.	0/0:11,0:10:2.99:0,3,24	0/1:17,0:16:3:3,0,39	0/0:30,0:25:49.19:0,49,294	0/0:23,0:19:20.55:0,21,111	0/0:6,0:5:14.44:0,14,87
chr10	90219986	.	A	ACTCTCTCTCTCT	2589.01	PASS	AB=1.000;AC=26;AF=0.722;AN=36;BaseQRankSum=-0.004;DP=494;FS=0.813;HRun=0;HaplotypeScore=202.4071;InbreedingCoeff=-0.2295;MQ=30.49;MQ0=60;MQRankSum=-2.325;QD=7.82;ReadPosRankSum=-2.535;VQSLOD=2.3622;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,0:9:1.14:58,1,0	./.	./.	./.	1/1:18,0:12:3:67,3,0	0/1:38,0:32:7.59:8,0,53	0/1:18,0:10:30.86:31,0,71	1/1:13,0:12:7.27:163,7,0	1/1:22,1:21:35.76:949,36,0	0/1:9,0:7:0:0,0,0	./.	1/1:17,2:16:17.38:320,17,0	0/0:7,3:11:0.28:0,0,1	1/1:34,0:34:1.95:138,2,0	1/1:13,1:12:6.74:136,7,0	0/1:32,0:31:18.98:19,0,97	1/1:4,0:3:3.01:170,3,0	0/1:19,0:16:23.23:23,0,510	./.	./.	1/1:18,0:19:2.98:8,3,0	./.	./.	./.	0/1:30,0:25:99:315,0,474	0/1:24,0:20:99:176,0,334	0/1:7,0:6:99:116,0,199
chr10	90220007	.	C	CTGTGTGTGTGTGTG	4963.87	PASS	AB=0.787;AC=37;AF=0.712;AN=52;BaseQRankSum=-2.993;DP=568;FS=5.504;HRun=0;HaplotypeScore=191.5818;InbreedingCoeff=0.5447;MQ=35.77;MQ0=56;MQRankSum=-4.628;QD=12.93;ReadPosRankSum=0.435;VQSLOD=3.5458;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:13:3.01:146,3,0	0/0:10,0:10:4.10:0,4,148	0/0:31,0:7:15.80:0,16,455	0/0:29,0:4:5.97:0,6,138	0/1:13,1:21:0:0,0,0	1/1:16,2:13:3.01:201,3,0	1/1:41,3:39:6.02:111,6,0	1/1:25,0:16:16.29:405,16,0	1/1:9,2:10:2.70:201,3,0	1/1:13,1:15:16.88:664,17,0	0/0:8,2:10:0.54:0,1,1	1/1:11,1:11:0.47:1,0,0	1/1:13,0:17:2.40:35,2,0	1/1:9,0:8:3.01:74,3,0	0/0:39,0:39:47.26:0,47,1273	1/1:5,5:12:3.01:52,3,0	0/0:27,0:26:21.97:0,22,619	1/1:7,0:6:12.01:243,12,0	1/1:15,1:19:19.24:187,19,0	./.	1/1:13,1:14:0.47:1,0,0	1/1:18,0:22:0.11:0,0,0	0/1:14,3:18:0:0,0,0	0/1:8,0:8:0:1,0,0	./.	1/1:23,5:31:50.47:1782,50,0	1/1:18,0:25:11.06:474,11,0	1/1:4,3:9:6.02:387,6,0
chr10	90222872	.	A	AG	9012.61	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-16.035;DP=749;FS=2.882;HRun=0;HaplotypeScore=73.3487;InbreedingCoeff=0.9985;MQ=69.58;MQ0=3;MQRankSum=1.024;QD=34.93;ReadPosRankSum=2.042;VQSLOD=4.5788;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,46:46:99:1617,117,0	0/0:11,0:11:28.64:0,29,378	0/0:21,0:17:32.27:0,32,452	0/0:35,0:17:26.81:0,27,305	0/0:35,0:35:99:0,102,1376	1/1:1,21:22:54.17:753,54,0	1/1:0,19:19:54.18:754,54,0	1/1:2,18:20:51.03:625,51,0	0/0:33,0:33:99:0,99,1351	0/0:31,0:31:81.22:0,81,1032	0/0:18,0:18:54.17:0,54,735	0/0:38,0:38:99:0,111,1479	0/0:33,0:33:96.26:0,96,1285	0/0:28,0:28:84.22:0,84,1072	0/0:26,0:26:75.16:0,75,973	0/0:27,0:27:81.23:0,81,1065	0/0:32,0:32:90.08:0,90,1239	0/0:22,0:22:60.18:0,60,816	1/1:1,15:16:48.08:610,48,0	1/1:2,30:32:90.18:1223,90,0	1/1:1,28:29:60.19:834,60,0	0/0:26,0:26:78.23:0,78,1043	0/0:23,0:23:66.08:0,66,808	0/0:31,0:31:93.29:0,93,1263	0/0:20,0:20:60.14:0,60,793	1/1:5,27:32:38.28:925,38,0	1/1:0,36:36:99:1421,102,0	1/1:0,6:6:18.06:251,18,0
chr10	90223433	.	C	CTGTG	844.75	PASS	AB=0.942;AC=21;AF=0.457;AN=46;BaseQRankSum=0.353;DP=714;FS=0.817;HRun=0;HaplotypeScore=154.8091;InbreedingCoeff=0.3984;MQ=60.94;MQ0=9;MQRankSum=-1.964;QD=2.43;ReadPosRankSum=-2.655;VQSLOD=2.2685;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:2.65:0,3,12	1/1:12,0:12:2.99:24,3,0	./.	./.	0/1:25,0:25:6.41:16,0,6	1/1:20,0:20:3.01:32,3,0	1/1:31,0:31:0.85:2,1,0	1/1:32,0:31:20.32:175,20,0	0/0:29,0:28:23.95:0,24,253	0/1:31,0:30:23.96:24,0,61	0/0:12,0:12:2.99:0,3,23	0/0:31,0:31:26.40:0,26,286	0/0:21,0:22:21.01:0,21,222	0/0:28,0:28:15.04:0,15,171	0/1:13,8:21:22.29:155,0,22	./.	1/1:26,6:34:24.84:481,25,0	0/1:18,0:18:0.03:0,0,54	1/1:15,0:15:0.89:2,1,0	./.	1/1:76,0:75:2.04:6,2,0	0/0:15,0:15:9.67:0,10,65	0/0:16,0:16:8.97:0,9,78	0/0:40,0:38:8.53:0,9,105	0/0:18,0:18:14.96:0,15,155	1/1:14,0:14:6.90:29,7,0	0/1:18,0:18:0.07:43,0,0	./.
chr10	90223475	.	GCGCGCGCC	G	2898.54	PASS	AB=0.882;AC=18;AF=0.360;AN=50;BaseQRankSum=-2.623;DP=431;FS=1.252;HRun=0;HaplotypeScore=130.3146;InbreedingCoeff=0.0145;MQ=47.14;MQ0=11;MQRankSum=-5.393;QD=10.54;ReadPosRankSum=-0.031;VQSLOD=2.4462;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:1,28:29:0:0,0,0	0/1:4,0:4:9.55:18,0,10	0/0:15,0:5:7.98:0,8,264	0/0:16,0:3:9.03:0,9,193	0/0:10,0:10:8.97:0,9,134	0/1:3,7:10:0.03:0,0,0	0/0:2,14:16:2.53:0,3,83	1/1:5,23:24:70.91:1705,71,0	0/1:20,0:20:18.77:19,0,170	0/1:13,0:12:56.10:56,0,193	0/0:11,0:11:13.55:0,14,109	0/1:27,1:28:12.24:12,0,222	0/1:11,0:11:8.49:8,0,142	0/0:12,0:12:16.89:0,17,153	0/1:15,0:14:31.97:32,0,131	0/0:7,0:7:5.53:0,6,78	0/1:23,0:23:40.94:41,0,1008	0/1:13,0:15:34.53:35,0,290	./.	./.	1/1:6,32:37:6.49:138,6,0	0/0:14,1:15:17.70:0,18,145	0/0:15,0:15:9.85:0,10,72	0/0:27,1:26:23.26:0,23,232	0/1:17,1:18:7.50:7,0,93	0/1:7,4:10:48.38:483,0,48	1/1:2,9:11:18.95:495,19,0	./.
chr10	90223477	.	GCGCGCC	G	2820.10	PASS	AB=0.977;AC=27;AF=0.540;AN=50;BaseQRankSum=-2.435;DP=417;FS=0.588;HRun=0;HaplotypeScore=120.4858;InbreedingCoeff=-0.0774;MQ=46.97;MQ0=11;MQRankSum=-3.041;QD=8.65;ReadPosRankSum=2.377;VQSLOD=2.0648;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:0:0,0,0	0/1:5,0:5:4.52:5,0,84	0/1:15,0:6:1.41:1,0,270	0/0:16,0:3:9.02:0,9,123	0/1:10,0:10:5.72:6,0,41	0/1:10,0:10:0.03:0,0,0	0/0:16,0:16:2.67:0,3,63	1/1:28,0:24:62.70:1226,63,0	1/1:17,2:18:4.87:139,5,0	0/1:11,1:11:11.37:92,0,11	0/1:11,0:11:2.56:3,0,3	0/1:24,2:26:50.87:188,0,51	0/1:10,0:10:50.13:118,0,50	0/1:11,1:12:22.82:61,0,23	0/1:14,0:13:17.95:18,0,176	0/1:7,0:7:23.39:23,0,25	0/0:22,0:22:3.37:0,3,876	0/1:16,0:16:53.21:54,0,53	./.	./.	1/1:38,0:37:6.02:117,6,0	0/1:14,0:14:6.87:7,0,7	1/1:11,0:11:0.82:2,1,0	0/0:26,0:24:13.88:0,14,58	0/1:16,1:17:10.91:42,0,11	1/1:9,2:10:16.66:452,17,0	1/1:9,1:10:18.06:407,18,0	./.
chr10	90223479	.	GCGCC	G	3897.59	PASS	AB=0.925;AC=36;AF=0.720;AN=50;BaseQRankSum=-2.198;DP=411;FS=24.450;HRun=0;HaplotypeScore=110.4611;InbreedingCoeff=0.2862;MQ=46.84;MQ0=10;MQRankSum=0.138;QD=11.30;ReadPosRankSum=4.901;VQSLOD=1.2306;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:29:0:0,0,0	0/1:4,0:4:21.59:22,0,58	0/1:20,0:7:4.40:4,0,192	0/0:18,0:4:11.74:0,12,91	1/1:8,1:9:5.43:66,5,0	0/1:8,2:10:0.01:0,0,0	0/0:15,1:16:2.69:0,3,48	1/1:28,0:24:46.07:771,46,0	1/1:18,0:18:29.22:338,29,0	1/1:12,0:11:32.57:299,33,0	1/1:10,0:10:7.62:65,8,0	1/1:22,3:25:31.87:394,32,0	0/1:8,1:9:5.15:148,0,5	1/1:12,0:12:15.01:175,15,0	0/1:13,1:13:18.13:18,0,158	0/1:6,1:7:10.49:45,0,10	0/0:21,0:21:33.55:0,34,512	1/1:16,0:16:27.33:281,27,0	./.	./.	1/1:36,2:37:5.93:93,6,0	1/1:11,1:13:18.44:161,18,0	1/1:9,1:10:2.67:57,3,0	0/1:21,3:22:5.08:129,0,5	1/1:14,2:16:12.78:222,13,0	1/1:11,0:10:15.20:335,15,0	1/1:10,0:10:18.06:275,18,0	./.
chr10	90223493	.	GGTATC	G	421.41	PASS	AB=0.922;AC=10;AF=0.179;AN=56;BaseQRankSum=1.453;DP=463;FS=1.704;HRun=0;HaplotypeScore=137.6297;InbreedingCoeff=-0.0175;MQ=45.01;MQ0=16;MQRankSum=-1.507;QD=2.57;ReadPosRankSum=-3.391;VQSLOD=1.7436;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:32:11.62:12,0,157	0/0:6,0:6:15.05:0,15,454	0/0:39,0:10:20.73:0,21,540	0/0:31,0:7:21.07:0,21,505	0/0:8,0:9:15.52:0,16,419	0/1:11,0:11:0.30:0,0,1	1/1:11,2:12:2.08:19,2,0	0/0:28,0:27:39.56:0,40,885	0/0:14,0:15:16.96:0,17,441	0/0:9,0:8:24.08:0,24,642	0/0:12,0:12:9.50:0,10,270	0/0:21,0:21:19.15:0,19,543	0/0:11,0:11:17.69:0,18,431	0/0:13,0:13:18.53:0,19,392	0/0:12,0:12:15.41:0,15,265	0/0:8,0:8:15.05:0,15,390	0/0:24,0:23:69.19:0,69,1936	0/0:20,0:21:44.84:0,45,1074	0/1:6,4:8:99:144,0,144	0/0:10,0:10:5.04:0,5,33	0/1:30,2:33:56.72:58,0,57	0/0:11,0:12:15.20:0,15,393	0/1:10,0:10:45.09:45,0,111	0/1:25,2:27:51.41:51,0,673	0/0:13,0:14:8.59:0,9,225	0/1:11,3:12:99:197,0,444	0/1:8,0:9:28.86:29,0,150	0/0:2,0:2:3.01:0,3,37
chr10	90223498	.	C	CTGTG	2908.88	PASS	AB=0.929;AC=42;AF=0.750;AN=56;BaseQRankSum=0.764;DP=494;FS=25.306;HRun=0;HaplotypeScore=141.1724;InbreedingCoeff=0.2884;MQ=46.50;MQ0=16;MQRankSum=-1.155;QD=6.46;ReadPosRankSum=-1.718;VQSLOD=0.9946;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:31:23.86:36,0,24	0/0:7,0:7:12.04:0,12,190	1/1:38,0:10:1.55:4,2,0	0/1:30,0:7:6.04:31,0,6	1/1:7,2:10:8.73:105,9,0	1/1:9,0:9:2.99:23,3,0	0/1:14,0:13:0:1,0,0	1/1:29,0:27:2.85:20,3,0	1/1:9,4:21:7.26:153,7,0	0/1:11,0:10:12.34:69,0,12	0/1:5,7:14:6.96:7,0,19	1/1:15,4:22:23.76:388,24,0	1/1:3,7:10:12.04:287,12,0	1/1:5,9:19:9.91:98,10,0	0/0:10,0:11:15.03:0,15,201	1/1:5,4:11:8.25:93,8,0	0/0:24,0:25:24.30:0,24,750	1/1:16,5:26:19.55:364,20,0	1/1:12,0:10:11.45:157,11,0	0/1:11,0:11:0:0,0,0	1/1:33,0:32:2.88:46,3,0	1/1:11,1:12:5.50:95,5,0	1/1:7,1:9:9.50:148,9,0	1/1:24,6:30:22.86:431,23,0	0/1:11,3:14:0.07:1,0,0	1/1:22,0:19:21.61:301,22,0	0/1:8,0:8:19.94:152,0,20	1/1:2,0:2:3.01:50,3,0
chr10	90223522	.	G	GTGTGTC	2448.74	PASS	AB=0.980;AC=25;AF=0.446;AN=56;BaseQRankSum=3.590;DP=553;FS=0.943;HRun=0;HaplotypeScore=152.5723;InbreedingCoeff=0.0199;MQ=46.04;MQ0=19;MQRankSum=-1.152;QD=6.46;ReadPosRankSum=0.772;VQSLOD=2.4856;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:31:36.77:172,0,37	0/0:8,0:8:21.02:0,21,347	0/0:30,0:7:10.48:0,10,92	0/0:42,0:14:28.36:0,28,268	0/1:12,0:11:8.17:8,0,87	1/1:11,3:14:1.83:78,2,0	1/1:15,1:14:16.47:118,16,0	1/1:36,0:34:16.62:407,17,0	0/1:22,0:22:25.71:26,0,152	0/0:14,0:13:24.39:0,24,239	0/0:16,0:16:14.60:0,15,131	0/1:19,0:19:77.52:78,0,97	0/1:13,0:13:73.85:79,0,74	0/1:19,0:19:12.54:13,0,55	0/0:9,0:9:17.65:0,18,304	0/1:16,0:16:3.22:3,0,115	0/0:29,0:29:65.29:0,65,1271	0/1:26,0:25:99:127,0,140	0/1:17,0:15:24.04:242,0,24	1/1:14,2:15:17.26:120,17,0	1/1:36,0:36:13.90:194,14,0	0/0:11,0:11:13.69:0,14,108	0/1:8,0:8:29.85:30,0,79	0/1:32,0:31:99:116,0,162	0/0:13,0:13:4.68:0,5,47	0/1:24,1:21:8.33:430,0,8	0/1:14,1:15:23.54:264,0,24	1/1:2,1:3:5.99:124,6,0
chr10	90224560	.	TTTTG	T	4597.75	PASS	AB=0.819;AC=20;AF=0.357;AN=56;BaseQRankSum=13.066;DP=660;FS=2.504;HRun=0;HaplotypeScore=106.0840;InbreedingCoeff=0.8172;MQ=63.65;MQ0=4;MQRankSum=0.460;QD=16.30;ReadPosRankSum=1.507;VQSLOD=4.7436;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,14:39:38.25:599,38,0	0/0:7,0:7:12.04:0,12,286	0/0:32,0:25:12.04:0,12,279	0/0:20,0:15:9.03:0,9,199	0/0:16,0:16:36.12:0,36,785	1/1:10,10:20:21.07:334,21,0	1/1:6,9:15:24.08:381,24,0	1/1:21,10:31:29.04:364,29,0	0/0:23,0:23:48.16:0,48,1118	0/0:33,0:33:69.23:0,69,1541	0/0:18,0:18:33.11:0,33,727	0/1:26,1:27:5.62:6,0,854	0/0:26,0:26:63.21:0,63,1411	0/0:22,1:23:9.43:0,9,1207	0/0:23,0:23:54.17:0,54,1226	0/0:29,0:29:48.15:0,48,1070	0/0:26,0:26:54.19:0,54,1285	0/0:25,0:25:56.78:0,57,1124	1/1:14,6:20:18.05:257,18,0	1/1:9,13:21:33.11:477,33,0	1/1:16,14:30:33.11:525,33,0	0/0:24,0:24:45.15:0,45,1064	0/0:14,0:14:27.09:0,27,634	0/0:22,1:23:9.43:0,9,1216	0/0:16,0:16:27.09:0,27,646	0/1:17,16:33:20.64:699,0,21	1/1:14,17:31:51.17:812,51,0	1/1:11,3:14:9.03:143,9,0
chr10	90225566	.	G	GA	4033.55	PASS	AB=0.741;AC=22;AF=0.393;AN=56;BaseQRankSum=-7.344;DP=596;FS=3.150;HRun=12;HaplotypeScore=62.3149;InbreedingCoeff=0.6584;MQ=69.44;MQ0=1;MQRankSum=2.022;QD=14.30;ReadPosRankSum=-1.320;VQSLOD=3.8932;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:18:27.04:263,27,0	0/0:14,0:15:37.58:0,38,259	0/0:21,0:15:14.90:0,15,129	0/0:13,0:9:2.72:0,3,59	0/0:24,0:25:32.75:0,33,241	1/1:6,26:32:6.38:547,6,0	1/1:2,8:10:15.02:146,15,0	1/1:8,17:25:13.64:432,14,0	0/0:19,0:19:44.67:0,45,324	0/0:25,0:29:49.52:0,50,412	0/1:12,20:33:14.01:295,0,14	0/0:14,0:16:21.68:0,22,160	0/0:20,1:22:23.52:0,24,324	0/1:12,1:13:9.94:10,0,87	0/0:21,1:22:18.01:0,18,283	0/0:24,0:25:58.60:0,59,416	0/0:22,1:23:56.63:0,57,416	0/0:21,1:23:21.81:0,22,292	1/1:9,14:25:28.35:370,28,0	1/1:6,23:33:25.64:468,26,0	0/1:4,11:15:35.53:96,0,36	0/0:15,0:15:32.75:0,33,236	0/0:29,0:30:55.19:0,55,386	0/1:8,2:11:33.40:33,0,96	0/0:13,0:14:40.71:0,41,283	1/1:13,10:25:24.47:342,24,0	1/1:7,26:35:95.73:884,96,0	1/1:3,4:7:17.80:148,18,0
chr10	90227095	.	GA	G	6066.59	PASS	AB=0.684;AC=44;AF=0.786;AN=56;BaseQRankSum=5.352;DP=579;FS=0.501;HRun=13;HaplotypeScore=61.8616;InbreedingCoeff=0.4029;MQ=60.12;MQ0=19;MQRankSum=-0.302;QD=11.62;ReadPosRankSum=0.902;VQSLOD=4.5972;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,23:32:37.05:419,37,0	0/0:3,0:3:9.01:0,9,88	0/1:22,1:9:33.92:34,0,55	0/0:16,0:6:11.80:0,12,83	1/1:3,13:16:29.82:219,30,0	0/1:6,13:20:43.62:203,0,44	1/1:6,15:21:35.72:263,36,0	1/1:12,26:34:65.49:481,65,0	1/1:5,8:11:11.91:88,12,0	1/1:7,17:24:50.28:359,50,0	1/1:3,17:20:41.69:306,42,0	1/1:6,19:24:47.66:350,48,0	1/1:1,13:15:31.86:225,32,0	1/1:4,15:18:41.75:306,42,0	0/1:14,2:16:1.96:2,0,273	0/1:6,21:27:5.66:282,0,6	0/0:34,3:37:7.91:0,8,680	0/1:3,17:21:2.61:300,0,3	1/1:4,14:19:16.62:264,17,0	1/1:9,6:15:17.85:131,18,0	1/1:1,11:12:23.84:175,24,0	1/1:5,10:16:25.88:181,26,0	1/1:3,9:13:23.89:149,24,0	1/1:9,19:28:12.61:276,13,0	1/1:2,18:23:50.84:346,51,0	0/1:4,13:17:19.66:195,0,20	1/1:5,19:27:21.67:295,22,0	1/1:4,13:14:29.82:219,30,0
chr10	90227585	.	A	ACC	27170.88	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.392;DP=632;FS=3.757;HRun=2;HaplotypeScore=80.5568;InbreedingCoeff=0.9937;MQ=87.11;MQ0=0;MQRankSum=-10.647;QD=46.37;ReadPosRankSum=7.338;VQSLOD=4.5309;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,28:37:87.26:1553,87,0	1/1:0,10:11:27.09:505,27,0	0/0:22,0:22:63.19:0,63,866	0/0:24,0:24:59.88:0,60,775	1/1:5,9:14:33.10:585,33,0	1/1:0,12:12:21.07:392,21,0	1/1:2,32:35:87.26:1594,87,0	1/1:0,27:27:81.25:1391,81,0	1/1:0,20:20:54.19:1010,54,0	1/1:1,15:16:48.16:872,48,0	1/1:1,13:15:33.11:616,33,0	1/1:1,31:32:78.27:1458,78,0	1/1:0,20:20:51.17:953,51,0	1/1:2,21:23:57.20:1065,57,0	1/1:1,26:27:63.17:1180,63,0	1/1:1,29:31:69.10:1291,69,0	1/1:2,42:44:99:2346,126,0	1/1:1,21:23:63.22:1178,63,0	1/1:1,16:19:48.12:852,48,0	1/1:0,11:12:30.10:561,30,0	1/1:3,26:29:69.19:1256,69,0	1/1:0,8:10:21.07:393,21,0	1/1:2,13:16:26.79:505,27,0	1/1:0,30:30:81.28:1516,81,0	1/1:0,16:16:42.14:787,42,0	1/1:2,25:27:72.22:1270,72,0	1/1:2,28:30:84.24:1535,84,0	1/1:1,9:10:27.09:505,27,0
chr10	90227737	.	ACACACAC	A	1439.44	PASS	AB=0.993;AC=17;AF=0.304;AN=56;BaseQRankSum=-2.809;DP=630;FS=6.718;HRun=0;HaplotypeScore=126.5969;InbreedingCoeff=0.0869;MQ=54.05;MQ0=78;MQRankSum=-2.292;QD=4.64;ReadPosRankSum=-1.047;VQSLOD=1.9129;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:50:86.48:0,86,1214	0/0:9,0:9:24.08:0,24,407	0/0:20,0:9:23.28:0,23,270	0/0:28,0:11:30.05:0,30,357	0/0:23,0:23:13.91:0,14,87	1/1:19,0:13:12.03:140,12,0	0/0:23,1:21:8.94:0,9,90	1/1:25,0:19:44.05:454,44,0	0/1:23,0:18:22.62:61,0,23	0/1:18,0:15:64.60:65,0,142	0/1:13,0:13:11.93:12,0,14	0/0:19,0:15:14.52:0,15,98	0/1:16,0:12:39.03:39,0,123	0/0:13,0:10:8.88:0,9,59	0/0:25,0:24:42.14:0,42,842	0/1:31,0:26:9.53:10,0,114	0/0:37,0:36:75.25:0,75,1897	0/1:21,1:14:79.77:113,0,80	0/1:17,0:16:2.03:220,0,2	0/0:20,2:20:11.58:0,12,71	0/1:28,0:17:18.27:243,0,18	0/0:17,0:15:5.91:0,6,38	0/0:16,0:12:2.97:0,3,20	0/1:41,0:34:0.16:0,0,82	0/0:13,0:10:8.94:0,9,97	1/1:25,0:15:8.24:159,8,0	0/1:27,1:24:32.63:66,0,33	0/1:4,0:3:11.39:26,0,11
chr10	90227739	.	ACACAC	A	2766.37	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=2.041;DP=624;FS=8.586;HRun=0;HaplotypeScore=109.5966;InbreedingCoeff=0.4662;MQ=55.36;MQ0=76;MQRankSum=-2.016;QD=6.08;ReadPosRankSum=1.415;VQSLOD=1.3220;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:48:85.51:0,86,1083	0/0:9,0:9:27.09:0,27,400	0/0:21,0:10:26.29:0,26,310	0/0:28,0:11:30.05:0,30,356	1/1:24,0:24:10.19:29,10,0	1/1:20,0:14:15.05:191,15,0	0/1:25,0:22:6.01:6,0,23	1/1:25,0:20:48.59:541,49,0	1/1:22,3:20:13.58:199,14,0	0/1:19,0:16:11.07:140,0,11	1/1:4,9:13:5.05:68,5,0	1/1:18,0:14:10.37:31,10,0	0/1:15,0:11:45.24:98,0,45	1/1:12,1:10:6.11:18,6,0	0/0:22,0:21:42.14:0,42,734	1/1:30,2:27:20.75:166,21,0	0/0:37,0:36:75.25:0,75,1505	0/1:19,0:11:14.97:96,0,15	1/1:16,1:16:35.61:445,36,0	1/1:20,0:18:8.91:30,9,0	0/1:27,0:16:6.25:244,0,6	1/1:18,0:16:4.26:13,4,0	1/1:16,0:12:2.03:6,2,0	1/1:40,1:35:13.20:91,13,0	0/1:12,0:9:4.64:5,0,24	1/1:25,1:16:26.86:324,27,0	1/1:26,0:22:10.61:81,11,0	1/1:3,1:3:8.82:135,9,0
chr10	90227741	.	ACAC	A	5131.07	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-1.792;DP=620;FS=11.947;HRun=0;HaplotypeScore=92.5729;InbreedingCoeff=0.8121;MQ=56.51;MQ0=76;MQRankSum=-1.895;QD=11.28;ReadPosRankSum=0.206;VQSLOD=3.6897;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:49:87.32:0,87,1039	0/0:9,0:9:26.82:0,27,354	0/0:22,0:11:25.36:0,25,308	0/0:28,0:11:30.05:0,30,356	1/1:5,19:24:15.05:249,15,0	1/1:20,0:14:15.05:191,15,0	1/1:8,17:22:3.23:95,3,0	1/1:26,0:21:52.34:620,52,0	1/1:10,15:20:15:190,15,0	1/1:8,11:16:25.18:350,25,0	1/1:13,0:13:6.02:80,6,0	1/1:6,11:13:15:249,15,0	1/1:15,1:12:12.43:203,12,0	1/1:5,8:10:9.03:150,9,0	0/0:20,0:19:42.14:0,42,623	1/1:11,21:27:27.08:410,27,0	0/0:33,0:32:75.04:0,75,1153	1/1:18,2:12:14.92:246,15,0	1/1:2,14:15:36.11:456,36,0	1/1:5,16:19:12.04:200,12,0	1/1:28,0:17:20.83:278,21,0	1/1:5,13:16:5.91:100,6,0	1/1:5,10:11:3.01:50,3,0	1/1:13,24:31:18.06:279,18,0	1/1:11,1:9:2.88:95,3,0	1/1:27,0:17:30.79:358,31,0	1/1:9,18:23:13.27:171,13,0	1/1:2,2:3:9.02:114,9,0
chr10	90227743	.	AC	A	3823.96	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=2.111;DP=604;FS=13.189;HRun=2;HaplotypeScore=85.6692;InbreedingCoeff=0.8542;MQ=57.54;MQ0=76;MQRankSum=-1.430;QD=8.63;ReadPosRankSum=0.613;VQSLOD=-0.1153;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,1:46:85.41:0,85,985	0/0:9,0:9:26.45:0,26,327	0/0:22,0:11:25.52:0,26,309	0/0:29,0:12:33.06:0,33,395	1/1:20,1:21:14.81:102,15,0	1/1:4,16:14:15.05:191,15,0	1/1:22,2:21:8.89:75,9,0	1/1:6,21:22:56.52:667,57,0	1/1:24,0:19:14.56:84,15,0	1/1:15,3:15:31.30:329,31,0	1/1:10,2:12:5.75:34,6,0	1/1:16,1:13:14.72:91,15,0	1/1:4,12:12:21.39:217,21,0	1/1:13,0:10:8.84:55,9,0	0/0:20,0:19:45.13:0,45,584	1/1:30,1:26:26.32:159,26,0	0/0:31,0:30:74.46:0,74,842	1/1:8,12:12:20.93:226,21,0	1/1:16,0:15:35.94:410,36,0	1/1:19,1:19:11.77:72,12,0	1/1:8,18:15:27.08:334,27,0	1/1:16,2:16:5.80:37,6,0	1/1:15,0:11:2.94:18,3,0	1/1:34,2:30:17.63:107,18,0	1/1:2,9:8:8.92:77,9,0	1/1:11,15:16:34.12:370,34,0	1/1:26,1:23:12.75:92,13,0	1/1:4,0:3:8.91:77,9,0
chr10	90231620	.	C	CT	5892.39	PASS	AB=0.561;AC=26;AF=0.464;AN=56;BaseQRankSum=-9.138;DP=573;FS=6.858;HRun=10;HaplotypeScore=64.4281;InbreedingCoeff=0.7960;MQ=68.48;MQ0=2;MQRankSum=-2.672;QD=20.11;ReadPosRankSum=2.677;VQSLOD=5.9199;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,26:33:34.59:746,35,0	0/0:6,0:6:14.98:0,15,123	0/0:24,0:19:44.41:0,44,293	0/0:16,0:13:24.29:0,24,134	1/1:6,23:30:56.87:555,57,0	0/0:25,0:25:59.90:0,60,492	0/0:13,0:13:23.96:0,24,197	0/0:22,1:23:6.92:0,7,260	1/1:4,11:15:14.43:349,14,0	1/1:8,18:26:51.58:535,52,0	1/1:6,8:14:27.06:282,27,0	0/1:5,19:24:16.30:456,0,16	1/1:3,14:17:11.45:327,11,0	1/1:1,5:6:15.04:160,15,0	0/0:21,0:21:44.83:0,45,359	1/1:3,17:19:42.11:448,42,0	0/0:25,1:26:42.93:0,43,559	1/1:6,19:25:44.70:458,45,0	0/0:21,0:20:38.91:0,39,320	0/0:26,0:26:2.41:0,2,426	0/0:23,0:23:62.89:0,63,514	1/1:3,15:19:23.28:425,23,0	0/1:5,15:22:7.59:306,0,8	1/1:3,18:20:4.85:462,5,0	1/1:7,14:21:36.09:384,36,0	0/0:21,0:21:47.93:0,48,394	0/0:28,1:29:42.90:0,43,559	0/0:4,0:4:11.99:0,12,99
chr10	90232186	.	TA	T	6202.59	PASS	AB=0.929;AC=29;AF=0.518;AN=56;BaseQRankSum=-9.539;DP=578;FS=6.529;HRun=10;HaplotypeScore=78.8956;InbreedingCoeff=0.9144;MQ=68.53;MQ0=0;MQRankSum=-0.716;QD=20.34;ReadPosRankSum=4.804;VQSLOD=5.5623;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:77.89:667,78,0	0/0:5,0:5:12.03:0,12,133	0/0:26,1:21:7.70:0,8,271	0/1:12,1:9:11.15:11,0,95	1/1:4,21:25:59.94:514,60,0	0/0:1,0:28:62.50:0,62,312	0/0:3,0:9:17.23:0,17,95	0/0:3,0:27:68.63:0,69,363	1/1:2,14:16:38.99:339,39,0	1/1:1,20:22:62.01:524,62,0	1/1:2,16:18:44.89:381,45,0	1/1:0,7:7:14.63:130,15,0	1/1:5,14:19:44.98:390,45,0	1/1:3,18:21:50.56:442,51,0	0/0:19,0:19:48.12:0,48,524	1/1:2,16:18:47.99:417,48,0	0/0:22,0:22:63.14:0,63,679	1/1:6,24:30:38.80:566,39,0	0/0:7,0:26:60.13:0,60,338	0/0:3,0:21:48.69:0,49,260	0/0:2,0:21:48.29:0,48,241	1/1:1,16:17:47.99:416,48,0	1/1:5,22:27:53.98:468,54,0	1/1:4,11:15:30.46:261,30,0	1/1:0,30:30:77.90:677,78,0	0/0:9,1:30:38.34:0,38,321	0/0:7,0:31:62.73:0,63,341	0/0:0,0:7:19.89:0,20,99
chr10	90233630	.	T	TGA	676.67	PASS	AB=0.820;AC=28;AF=0.500;AN=56;BaseQRankSum=3.222;DP=685;FS=3.539;HRun=0;HaplotypeScore=133.4189;InbreedingCoeff=0.5557;MQ=72.43;MQ0=9;MQRankSum=-4.253;QD=2.20;ReadPosRankSum=-0.541;VQSLOD=2.3415;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:26:3.18:23,3,0	1/1:1,4:5:3:47,3,0	0/0:45,0:19:6.85:0,7,47	0/0:66,0:32:12.87:0,13,112	1/1:27,0:26:0.47:1,0,0	0/0:22,0:22:24.95:0,25,275	0/0:25,0:24:26.92:0,27,297	0/0:27,0:27:31.83:0,32,321	1/1:19,0:19:13.04:87,13,0	1/1:25,0:25:1.06:63,1,0	1/1:20,0:19:3.43:21,3,0	1/1:15,0:15:14.22:104,14,0	1/1:11,0:11:4.82:28,5,0	1/1:21,0:21:1.75:16,2,0	1/1:10,19:33:6.01:94,6,0	1/1:24,0:24:7.27:43,7,0	0/1:14,18:31:74.20:209,0,74	0/1:11,0:10:8.72:45,0,9	0/0:19,0:19:17.66:0,18,158	0/0:21,0:24:38.94:0,39,421	0/0:41,0:41:64.90:0,65,679	1/1:19,0:19:5.89:50,6,0	1/1:19,0:18:2.07:23,2,0	0/0:20,0:20:0.36:0,0,1	0/0:22,0:22:5.02:0,5,20	0/0:28,0:28:47.72:0,48,482	0/0:26,0:29:44.94:0,45,506	0/0:10,0:10:12.01:0,12,118
chr10	90233652	.	AGT	A	1855.89	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=6.140;DP=646;FS=20.010;HRun=0;HaplotypeScore=128.4224;InbreedingCoeff=0.6016;MQ=49.63;MQ0=17;MQRankSum=-2.418;QD=4.75;ReadPosRankSum=-1.642;VQSLOD=1.6167;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:7.51:57,8,0	0/0:4,0:4:2.84:0,3,33	0/1:24,0:4:12.82:13,0,33	0/0:39,0:11:4.69:0,5,109	1/1:23,1:22:8.76:74,9,0	0/1:23,0:22:2.23:2,0,386	0/1:28,0:27:7.63:8,0,382	0/0:35,0:31:52.25:0,52,597	1/1:19,0:19:35.12:221,35,0	1/1:22,2:23:53.50:431,53,0	1/1:22,2:21:11.98:99,12,0	1/1:12,2:13:19.96:129,20,0	1/1:9,2:11:9.90:77,10,0	1/1:17,0:17:23.10:168,23,0	0/0:32,0:31:25.63:0,26,212	1/1:23,0:23:25.20:174,25,0	0/0:34,0:33:11.66:0,12,319	1/1:11,0:9:20.22:127,20,0	0/1:16,0:14:3.53:4,0,212	0/1:21,0:21:1.23:1,0,507	0/0:43,0:43:0.78:0,1,751	1/1:17,1:18:8.28:73,8,0	1/1:19,1:19:15.35:115,15,0	1/1:20,0:19:14.96:121,15,0	1/1:26,0:26:20.80:156,21,0	0/0:24,0:24:37.88:0,38,629	0/0:26,0:26:41.16:0,41,802	0/0:17,0:16:38.11:0,38,346
chr10	90233668	.	AGTGTGTGT	A	1795.64	PASS	AB=0.893;AC=20;AF=0.385;AN=52;BaseQRankSum=8.377;DP=562;FS=10.547;HRun=0;HaplotypeScore=173.0315;InbreedingCoeff=0.5316;MQ=43.77;MQ0=21;MQRankSum=-8.377;QD=9.40;ReadPosRankSum=-2.024;VQSLOD=1.8486;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:11.52:0,12,383	0/0:3,0:3:2.54:0,3,125	./.	./.	0/0:17,3:19:0.70:0,1,1	0/0:22,0:21:41.98:0,42,1423	0/0:28,0:28:51.65:0,52,1749	0/0:33,0:26:42.14:0,42,1173	1/1:11,4:15:9.47:213,9,0	0/1:13,5:14:20.93:411,0,21	1/1:17,3:17:0.94:2,1,0	0/1:11,2:11:13.04:190,0,13	1/1:5,4:12:15.87:369,16,0	1/1:5,4:9:0.94:1,1,0	0/0:35,0:34:39.07:0,39,1490	1/1:11,9:21:18.06:372,18,0	0/0:29,0:28:36.12:0,36,1300	0/1:13,0:10:12.34:111,0,12	0/0:24,0:21:39.05:0,39,1066	0/0:25,0:22:42.14:0,42,1578	0/0:50,0:51:87.76:0,88,2814	1/1:15,3:18:2.19:69,2,0	1/1:13,3:15:3.01:69,3,0	0/1:11,1:11:0:0,0,0	1/1:16,7:24:8.05:150,8,0	0/0:24,0:22:47.37:0,47,1562	0/0:24,0:24:42.05:0,42,1490	0/0:13,0:14:27.09:0,27,1111
chr10	90233696	.	TGA	T	78.91	PASS	AB=0.882;AC=3;AF=0.054;AN=56;BaseQRankSum=3.651;DP=620;FS=3.985;HRun=0;HaplotypeScore=156.5701;InbreedingCoeff=0.3323;MQ=45.21;MQ0=19;MQRankSum=1.395;QD=1.49;ReadPosRankSum=1.225;VQSLOD=2.6952;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:36:23.07:171,23,0	0/0:3,0:3:6:0,6,51	0/0:9,0:1:3:0,3,26	0/0:19,0:6:11.79:0,12,85	0/0:26,3:26:17.91:0,18,137	0/0:22,0:21:27.31:0,27,594	0/0:32,0:31:17.93:0,18,666	0/0:31,0:25:48.63:0,49,423	0/0:15,0:15:9.96:0,10,58	0/0:24,0:21:8.79:0,9,215	0/0:22,1:20:5.80:0,6,46	0/1:13,2:14:2.78:3,0,86	0/0:14,0:14:5.94:0,6,64	0/0:9,0:9:2.82:0,3,23	0/0:30,0:29:21.81:0,22,611	0/0:18,0:18:12.63:0,13,108	0/0:31,0:30:48.41:0,48,649	0/0:13,0:10:18.45:0,18,136	0/0:21,0:19:30.49:0,30,344	0/0:26,0:24:47.04:0,47,613	0/0:53,0:52:64.76:0,65,1157	0/0:20,1:21:6.91:0,7,50	0/0:17,3:20:15.84:0,16,120	0/0:15,0:14:14.79:0,15,116	0/0:22,1:23:3.76:0,4,25	0/0:31,0:29:72.14:0,72,766	0/0:24,0:24:4.84:0,5,437	0/0:11,0:11:27.07:0,27,417
chr10	90236682	.	A	ATT	5735.64	PASS	AB=0.771;AC=26;AF=0.464;AN=56;BaseQRankSum=-4.903;DP=578;FS=5.813;HRun=12;HaplotypeScore=77.1334;InbreedingCoeff=0.8792;MQ=69.70;MQ0=1;MQRankSum=-0.375;QD=21.48;ReadPosRankSum=-2.171;VQSLOD=3.8944;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:51:74.26:0,74,848	0/0:6,0:6:18.02:0,18,165	0/1:11,0:11:10.44:10,0,64	0/0:9,0:10:9.30:0,9,106	1/1:6,19:31:65.78:740,66,0	0/0:19,0:21:42.91:0,43,443	0/0:14,0:14:39.04:0,39,361	0/0:31,0:32:31.73:0,32,453	1/1:3,11:14:21.07:294,21,0	1/1:4,14:20:45:547,45,0	1/1:4,12:18:44.46:494,44,0	1/1:4,8:14:23.56:288,24,0	1/1:7,8:17:11.01:102,11,0	1/1:3,13:17:26.58:345,27,0	0/0:20,0:20:40.17:0,40,364	0/1:3,14:19:0.67:298,0,1	0/0:29,0:29:28.08:0,28,540	1/1:3,18:22:47.65:640,48,0	0/0:20,0:22:26.54:0,27,279	0/0:18,0:20:44.79:0,45,451	0/0:19,0:20:44.69:0,45,400	1/1:2,15:18:48.16:660,48,0	1/1:5,17:24:27.62:561,28,0	1/1:10,14:25:26.98:379,27,0	1/1:2,14:16:27.09:378,27,0	0/0:25,0:28:20.36:0,20,525	0/0:24,0:24:53.92:0,54,494	0/0:11,0:13:26.90:0,27,296
chr10	90237445	.	T	TGAA	343.38	PASS	AB=0.539;AC=30;AF=0.750;AN=40;BaseQRankSum=-1.830;DP=69;FS=2.831;HRun=0;HaplotypeScore=116.2847;InbreedingCoeff=0.2002;MQ=30.58;MQ0=0;MQRankSum=0.298;QD=6.24;ReadPosRankSum=-1.575;VQSLOD=2.0986;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,3:4:2.07:6,2,0	1/1:0,1:1:2.74:12,3,0	./.	./.	0/0:0,3:3:3.15:0,3,12	0/1:0,2:2:0:0,0,0	1/1:3,0:3:3.01:49,3,0	./.	1/1:1,2:3:3.01:39,3,0	0/1:0,3:3:1.68:2,0,10	1/1:2,1:2:2.85:26,3,0	1/1:0,5:5:5.44:30,5,0	1/1:2,3:5:1.66:7,2,0	0/1:1,4:5:0.33:21,0,0	1/1:2,2:4:3.01:57,3,0	1/1:1,2:3:2.74:17,3,0	1/1:1,1:2:3.01:58,3,0	0/0:0,1:1:0:0,0,0	1/1:1,1:2:5.90:42,6,0	./.	./.	0/0:0,2:2:0.89:0,1,2	0/1:1,2:3:0:0,0,0	1/1:2,2:4:3.81:54,4,0	1/1:2,1:1:2.74:12,3,0	./.	./.	./.
chr10	90238038	.	T	TA	1578.90	PASS	AC=38;AF=1.000;AN=38;DP=142;FS=0.000;HRun=2;HaplotypeScore=12.4804;InbreedingCoeff=-0.1206;MQ=16.86;MQ0=94;QD=13.16;VQSLOD=2.1588;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,1:1:3.01:32,3,0	./.	./.	./.	1/1:1,1:1:3.01:32,3,0	1/1:2,2:2:6.02:66,6,0	./.	./.	1/1:6,9:9:27.07:297,27,0	1/1:5,1:1:3.01:43,3,0	1/1:0,3:3:8.90:69,9,0	1/1:2,1:1:3.01:32,3,0	1/1:5,2:2:6.02:71,6,0	1/1:3,1:1:3.01:30,3,0	1/1:2,2:2:6.02:64,6,0	1/1:6,2:2:6.02:66,6,0	1/1:6,1:1:3.01:32,3,0	./.	1/1:3,1:1:3.01:43,3,0	1/1:0,2:2:6.02:65,6,0	./.	./.	1/1:1,3:3:9.02:97,9,0	./.	1/1:2,1:1:3.01:33,3,0	1/1:2,2:2:6.02:84,6,0	1/1:5,8:7:24.07:291,24,0	1/1:9,5:5:15.05:205,15,0
chr10	90240911	.	GA	G	164.79	PASS	AB=0.629;AC=5;AF=0.089;AN=56;BaseQRankSum=-0.002;DP=400;FS=18.925;HRun=15;HaplotypeScore=54.9233;InbreedingCoeff=0.6182;MQ=52.29;MQ0=8;MQRankSum=5.346;QD=3.92;ReadPosRankSum=1.636;VQSLOD=-0.2303;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:35.48:0,35,210	1/1:3,2:6:10.80:60,11,0	0/0:8,0:4:0.59:0,1,51	0/0:4,0:2:5.93:0,6,41	0/0:17,0:18:21.17:0,21,112	0/0:10,0:10:8.87:0,9,68	0/0:21,2:22:25.47:0,25,315	0/0:22,0:18:36.31:0,36,303	0/0:10,0:12:20.35:0,20,119	0/0:22,0:19:7.89:0,8,75	0/0:10,0:10:12.12:0,12,74	0/0:15,0:15:26.60:0,27,171	0/0:10,0:10:11.82:0,12,76	0/0:10,0:11:17.21:0,17,94	1/1:11,3:14:20.69:115,21,0	0/0:5,0:5:1.82:0,2,5	0/1:9,13:22:2.29:111,0,2	0/0:8,0:8:11.76:0,12,77	0/0:18,0:17:26.96:0,27,228	0/0:7,0:7:12.47:0,12,106	0/0:9,0:9:20.22:0,20,163	0/0:15,0:16:20.08:0,20,126	0/0:11,0:12:19.25:0,19,101	0/0:14,0:15:11.95:0,12,63	0/0:11,0:11:12.63:0,13,78	0/0:24,0:24:15.75:0,16,220	0/0:16,1:17:34.50:0,34,263	0/0:21,0:20:39.76:0,40,322
chr10	90240967	.	A	ACACT	7698.64	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-6.962;DP=377;FS=6.809;HRun=0;HaplotypeScore=67.2961;InbreedingCoeff=0.9672;MQ=68.42;MQ0=0;MQRankSum=-2.318;QD=46.10;ReadPosRankSum=4.672;VQSLOD=5.1073;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:21:21.02:520,21,0	0/0:10,0:10:30.05:0,30,441	0/0:22,0:20:53.66:0,54,739	0/0:26,0:23:59.95:0,60,928	1/1:1,11:12:24.08:620,24,0	0/0:6,0:6:15.05:0,15,277	0/0:16,0:16:45.11:0,45,709	0/0:20,0:20:57.14:0,57,878	1/1:3,9:14:24.54:576,25,0	1/1:1,14:15:32.81:573,33,0	1/1:0,9:9:18.06:500,18,0	1/1:0,19:20:42.09:1062,42,0	1/1:0,5:6:6.02:167,6,0	1/1:1,13:16:30.06:772,30,0	0/0:10,0:10:30.10:0,30,568	1/1:0,7:8:15.05:419,15,0	0/0:18,0:18:42.07:0,42,678	1/1:0,10:10:18.06:503,18,0	0/0:10,0:10:30.06:0,30,509	0/0:6,0:6:18.06:0,18,351	0/0:23,0:23:66.20:0,66,1191	1/1:0,10:10:24.08:619,24,0	1/1:1,4:4:9.03:247,9,0	1/1:2,12:14:29.97:720,30,0	1/1:0,5:7:18.06:401,18,0	0/0:17,0:17:51.16:0,51,908	0/0:16,0:16:48.15:0,48,899	0/0:10,0:10:30.08:0,30,504
chr10	90242014	.	C	CAA	6977.89	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-3.721;DP=625;FS=1.937;HRun=10;HaplotypeScore=82.8309;InbreedingCoeff=0.9686;MQ=78.36;MQ0=0;MQRankSum=-0.276;QD=24.31;ReadPosRankSum=0.392;VQSLOD=4.7307;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:28:9.92:101,10,0	0/0:9,0:9:27.06:0,27,275	0/0:23,0:23:23.48:0,23,323	0/0:19,0:19:14.50:0,14,136	1/1:5,26:33:80.38:1001,80,0	0/0:29,0:31:71.56:0,72,744	0/0:18,0:18:42.07:0,42,427	0/0:37,0:39:83.53:0,84,806	1/1:1,15:18:35.09:465,35,0	1/1:6,13:21:13.54:438,14,0	1/1:0,12:15:42.01:524,42,0	1/1:10,4:14:33.07:421,33,0	1/1:7,11:20:25.80:298,26,0	1/1:3,11:18:28.26:339,28,0	0/0:23,0:24:47.77:0,48,533	1/1:4,22:26:45.15:673,45,0	0/0:26,0:26:69.08:0,69,685	1/1:0,18:22:45.14:622,45,0	0/0:21,0:22:47.81:0,48,540	0/0:26,0:27:68.82:0,69,673	0/0:33,0:34:77.81:0,78,766	1/1:2,17:21:53.99:669,54,0	1/1:4,18:25:51.87:693,52,0	1/1:1,12:13:21.07:313,21,0	1/1:3,10:13:4.86:419,5,0	0/0:22,0:23:30.54:0,31,569	0/0:25,0:28:56.49:0,56,590	0/0:12,0:13:23.78:0,24,296
chr10	90243668	.	T	TGTGTGTGAGAGAGAGA	9991.43	PASS	AB=0.543;AC=27;AF=0.482;AN=56;BaseQRankSum=-4.104;DP=525;FS=16.986;HRun=0;HaplotypeScore=162.8919;InbreedingCoeff=0.8198;MQ=57.76;MQ0=11;MQRankSum=-9.806;QD=49.46;ReadPosRankSum=0.323;VQSLOD=3.5315;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:18:8.36:282,8,0	0/0:8,0:8:24.07:0,24,894	0/0:55,0:19:40.59:0,41,1009	0/0:52,0:23:47.98:0,48,1628	1/1:3,17:27:6.02:477,6,0	0/0:25,0:25:69.22:0,69,2628	0/0:12,0:12:11.84:0,12,845	0/0:26,0:26:59:0,59,1669	1/1:8,0:10:14.64:704,15,0	1/1:5,7:19:51.16:1976,51,0	1/1:1,11:19:9.03:715,9,0	1/1:2,4:7:9.03:521,9,0	1/1:3,4:12:8.63:507,9,0	1/1:0,2:9:3.01:239,3,0	0/0:12,0:12:33.11:0,33,1330	0/1:3,9:18:3.52:719,0,4	0/0:16,0:16:39.13:0,39,1437	1/1:1,4:7:5.98:259,6,0	0/0:20,0:19:57.17:0,57,2097	0/0:15,0:14:42.14:0,42,1677	0/0:16,0:16:45.15:0,45,1682	1/1:1,9:12:12.04:954,12,0	1/1:1,8:11:3.01:238,3,0	1/1:2,3:11:9.03:697,9,0	1/1:0,14:20:24.08:1706,24,0	0/0:14,0:14:29.20:0,29,980	0/0:29,0:29:87.28:0,87,3582	0/0:22,0:22:66.23:0,66,3026
chr10	90245195	.	TA	T	898.35	PASS	AB=0.874;AC=17;AF=0.304;AN=56;BaseQRankSum=7.407;DP=568;FS=0.000;HRun=15;HaplotypeScore=77.6322;InbreedingCoeff=0.0804;MQ=73.46;MQ0=10;MQRankSum=-1.671;QD=3.89;ReadPosRankSum=4.279;VQSLOD=0.6067;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:4,13:20:38.33:116,0,38	1/1:0,12:12:29.53:187,30,0	0/0:57,0:22:22.96:0,23,115	0/0:39,0:21:0.49:0,0,26	0/1:23,2:25:3.16:3,0,315	0/0:15,5:21:22.44:0,22,292	0/0:15,0:16:31.21:0,31,285	0/0:29,1:35:3.18:0,3,333	0/0:14,1:18:8.30:0,8,179	0/1:20,2:22:0.04:0,0,203	0/0:19,0:21:28.43:0,28,335	0/1:10,1:11:13.89:14,0,134	0/1:8,3:12:34.05:34,0,84	0/1:9,1:11:9.35:9,0,167	1/1:4,14:18:41.07:263,41,0	0/1:10,2:12:17.54:18,0,111	1/1:2,19:21:56.15:360,56,0	0/0:22,0:24:28.31:0,28,384	0/1:23,1:27:15.65:16,0,245	0/0:20,0:20:19.41:0,19,261	0/0:10,2:12:7.68:0,8,176	0/0:6,0:8:14.74:0,15,109	0/1:13,2:18:19.32:19,0,184	0/1:2,0:3:8.31:13,0,8	0/0:14,0:19:38.41:0,38,300	0/1:15,3:19:11.64:12,0,222	0/0:22,1:27:30.55:0,31,465	0/0:17,1:19:10.55:0,11,202
chr10	90246585	.	A	AT	2411.76	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=14.611;DP=502;FS=10.818;HRun=3;HaplotypeScore=72.2171;InbreedingCoeff=0.2417;MQ=75.92;MQ0=0;MQRankSum=-0.014;QD=8.20;ReadPosRankSum=4.849;VQSLOD=-0.1289;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:31.53:191,32,0	1/1:0,8:8:18.53:240,19,0	0/0:11,0:11:24.12:0,24,233	0/0:18,0:16:18.11:0,18,332	0/1:27,0:27:29.92:90,0,30	0/0:16,0:16:45.12:0,45,518	0/0:18,0:18:51.11:0,51,567	0/0:30,0:30:81.18:0,81,948	0/1:18,0:18:13.81:68,0,14	0/1:20,0:20:35.55:36,0,81	0/1:20,0:20:38.19:59,0,38	0/1:11,0:11:24.30:24,0,72	1/1:5,0:5:11.52:39,12,0	1/1:13,0:13:4.70:62,5,0	1/1:2,18:20:51.17:678,51,0	1/1:16,0:15:2.39:57,2,0	1/1:3,24:27:63.04:810,63,0	0/1:14,0:13:14.38:65,0,14	0/0:17,0:17:48.13:0,48,557	0/0:20,0:20:57.15:0,57,661	0/0:14,0:14:42.13:0,42,503	0/1:10,0:10:11.67:12,0,32	0/1:14,0:14:11.03:38,0,11	0/1:19,0:19:7.89:79,0,8	0/1:17,0:17:19.17:55,0,19	0/0:18,0:18:51.13:0,51,588	0/0:33,0:33:89.71:0,90,1018	0/0:13,0:13:39.08:0,39,442
chr10	90246588	.	T	TA	6326.18	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-5.457;DP=503;FS=11.842;HRun=9;HaplotypeScore=62.5036;InbreedingCoeff=0.9574;MQ=75.73;MQ0=0;MQRankSum=0.048;QD=21.30;ReadPosRankSum=2.247;VQSLOD=4.9645;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,31:36:78.93:845,79,0	1/1:8,0:8:1.42:57,1,0	0/0:9,0:10:14:0,14,108	0/0:17,0:15:16.70:0,17,194	1/1:3,26:29:57.04:602,57,0	0/0:16,0:16:41.93:0,42,353	0/0:17,0:17:38.99:0,39,338	0/0:30,0:30:80.97:0,81,699	1/1:2,17:19:42.11:465,42,0	1/1:4,14:18:16.03:392,16,0	1/1:2,18:20:44.67:458,45,0	1/1:4,8:12:21.06:232,21,0	1/1:0,5:5:15.04:166,15,0	1/1:2,12:14:36.10:398,36,0	1/1:18,0:18:46.94:218,47,0	1/1:2,15:16:38.90:431,39,0	1/1:26,0:26:55.86:271,56,0	1/1:3,13:14:36.10:398,36,0	0/0:19,0:19:47.83:0,48,400	0/0:20,0:20:50.96:0,51,439	0/0:14,0:14:41.98:0,42,360	1/1:2,8:10:15.04:166,15,0	1/1:0,12:12:30.08:332,30,0	1/1:2,16:18:45.12:497,45,0	1/1:2,17:19:36.10:398,36,0	0/0:17,0:17:44.99:0,45,391	0/0:31,0:32:79.50:0,80,674	0/0:13,0:14:37.98:0,38,311
chr10	90246855	.	AAAAG	A	1127.63	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=5.995;DP=343;FS=3.550;HRun=0;HaplotypeScore=57.7974;InbreedingCoeff=0.7067;MQ=65.90;MQ0=11;MQRankSum=0.493;QD=8.05;ReadPosRankSum=0.584;VQSLOD=1.8057;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:39.10:0,39,681	0/0:2,0:2:0.47:0,0,1	0/0:21,0:8:14.04:0,14,157	0/0:10,0:4:9.03:0,9,128	1/1:23,1:22:52.66:371,53,0	0/0:17,0:17:45.05:0,45,826	0/0:8,0:8:18.06:0,18,393	0/0:32,0:28:82.33:0,82,1314	1/1:7,0:6:5.80:32,6,0	1/1:12,1:11:18.52:203,19,0	1/1:5,1:5:8.91:91,9,0	1/1:4,2:6:8.05:99,8,0	1/1:3,0:3:5.81:32,6,0	1/1:8,1:8:9.29:80,9,0	0/1:12,0:12:8.41:8,0,12	1/1:10,0:8:5.56:48,6,0	0/1:19,0:17:2.64:55,0,3	1/1:14,0:11:20.52:155,21,0	0/0:16,0:16:32.18:0,32,783	0/0:9,0:6:15.05:0,15,318	0/0:6,0:5:12.03:0,12,234	1/1:2,0:2:1.82:5,2,0	1/1:3,0:3:3:16,3,0	0/0:4,0:2:0:0,0,0	1/1:11,1:10:14.83:125,15,0	0/0:20,0:20:48.12:0,48,831	0/0:20,0:20:51.04:0,51,922	0/0:12,0:11:27.08:0,27,524
chr10	90246856	.	AAAG	A	1959.18	PASS	AB=0.538;AC=29;AF=0.537;AN=54;BaseQRankSum=6.001;DP=342;FS=6.849;HRun=0;HaplotypeScore=49.8698;InbreedingCoeff=0.7919;MQ=66.02;MQ0=11;MQRankSum=-0.766;QD=13.80;ReadPosRankSum=1.320;VQSLOD=1.6955;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:15.85:0,16,507	1/1:2,0:2:2.55:13,3,0	0/0:21,0:8:13.84:0,14,116	0/0:10,0:4:9.02:0,9,97	1/1:6,18:22:56.57:545,57,0	0/0:17,0:17:43.64:0,44,650	0/0:8,0:8:21.02:0,21,340	0/0:31,0:28:82.31:0,82,1119	0/1:1,6:6:4.05:76,0,4	1/1:6,7:11:28.88:330,29,0	1/1:4,2:5:5.82:93,6,0	1/1:5,1:6:14.96:125,15,0	1/1:0,3:3:6.02:85,6,0	1/1:3,6:8:11.99:133,12,0	1/1:11,1:12:11.88:83,12,0	1/1:2,8:8:8.81:83,9,0	1/1:17,2:17:3.23:114,3,0	1/1:11,3:11:27.67:251,28,0	0/0:17,0:17:34.12:0,34,672	0/0:9,0:6:17.99:0,18,276	0/0:6,0:5:11.98:0,12,197	1/1:2,0:2:3:27,3,0	1/1:1,2:3:8.78:76,9,0	./.	1/1:4,8:10:14.92:131,15,0	0/0:20,0:20:56.53:0,57,765	0/0:20,0:20:53.42:0,53,764	0/0:12,0:11:26.83:0,27,412
chr10	90246857	.	AAG	A	1832.25	PASS	AB=1.000;AC=29;AF=0.537;AN=54;BaseQRankSum=6.807;DP=340;FS=3.875;HRun=0;HaplotypeScore=44.9210;InbreedingCoeff=0.8109;MQ=66.16;MQ0=11;MQRankSum=-0.009;QD=13.09;ReadPosRankSum=1.128;VQSLOD=2.9877;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:32.77:0,33,400	1/1:0,2:2:2.77:38,3,0	0/0:21,0:8:13.32:0,13,95	0/0:9,1:4:8.73:0,9,61	1/1:22,1:21:56.62:433,57,0	0/0:17,0:17:23.12:0,23,467	0/0:8,0:8:21:0,21,268	0/0:31,0:28:82.14:0,82,917	0/1:7,0:6:3.81:40,0,4	1/1:14,0:12:32.98:287,33,0	1/1:6,0:5:10.54:78,11,0	1/1:6,0:6:14.92:114,15,0	1/1:3,0:3:5.99:49,6,0	1/1:8,1:8:11.94:91,12,0	1/1:2,9:11:15:162,15,0	1/1:9,1:8:8.98:84,9,0	1/1:11,8:17:5.46:188,5,0	1/1:12,1:10:29.95:257,30,0	0/0:17,0:17:15.34:0,15,527	0/0:9,0:6:18.03:0,18,231	0/0:6,0:5:11.95:0,12,160	1/1:2,0:2:3:27,3,0	1/1:2,1:3:8.97:83,9,0	./.	1/1:12,0:10:14.88:107,15,0	0/0:20,0:20:56.09:0,56,642	0/0:20,0:20:48.87:0,49,587	0/0:13,0:12:29.73:0,30,363
chr10	90246858	.	AG	A	1489.22	PASS	AB=1.000;AC=29;AF=0.537;AN=54;BaseQRankSum=7.049;DP=334;FS=1.650;HRun=1;HaplotypeScore=41.2671;InbreedingCoeff=0.7996;MQ=66.87;MQ0=11;MQRankSum=-0.173;QD=10.95;ReadPosRankSum=0.745;VQSLOD=1.5966;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:31.42:0,31,284	1/1:2,0:2:2.95:22,3,0	0/0:21,0:8:11.04:0,11,80	0/0:10,0:4:8.44:0,8,45	1/1:22,1:21:56.17:364,56,0	0/0:16,0:16:34.75:0,35,374	0/0:7,0:7:21:0,21,216	0/0:31,0:29:83.37:0,83,774	0/1:7,0:6:3.23:29,0,3	1/1:14,0:12:35.70:277,36,0	1/1:6,0:5:13.41:91,13,0	1/1:6,0:6:14.76:102,15,0	1/1:3,0:3:5.91:38,6,0	1/1:8,1:8:11.82:76,12,0	1/1:10,1:11:14.87:104,15,0	1/1:10,0:8:8.84:56,9,0	1/1:14,3:15:4.70:126,5,0	1/1:13,0:10:29.83:226,30,0	0/0:18,0:18:18.18:0,18,440	0/0:10,0:7:17.97:0,18,181	0/0:6,0:5:11.92:0,12,126	1/1:1,0:1:3:27,3,0	1/1:3,0:3:8.91:61,9,0	./.	1/1:11,0:9:14.76:95,15,0	0/0:20,0:20:54.66:0,55,527	0/0:20,0:20:39.56:0,40,440	0/0:12,1:12:6.99:0,7,260
chr10	90247235	.	CGT	C	1259.06	PASS	AB=0.890;AC=34;AF=0.654;AN=52;BaseQRankSum=3.536;DP=421;FS=0.762;HRun=0;HaplotypeScore=64.1911;InbreedingCoeff=0.4350;MQ=57.67;MQ0=11;MQRankSum=2.349;QD=4.82;ReadPosRankSum=1.997;VQSLOD=2.3834;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:8:5.68:28,6,0	./.	./.	0/0:14,0:7:0.47:0,0,1	1/1:14,5:18:6.02:65,6,0	0/1:18,3:21:11.87:12,0,216	0/0:18,0:18:6:0,6,68	0/0:31,0:30:12:0,12,145	1/1:8,2:10:8.51:75,9,0	1/1:9,0:11:5.68:28,6,0	1/1:7,5:10:9.02:96,9,0	1/1:10,1:11:3.01:33,3,0	1/1:10,2:11:5.29:64,5,0	1/1:5,2:7:6.02:66,6,0	1/1:13,5:18:9.02:99,9,0	0/1:11,5:17:30.84:97,0,31	1/1:21,10:31:18.72:310,19,0	1/1:20,3:23:12.76:136,13,0	0/1:16,1:16:20.81:21,0,100	0/1:11,0:10:1.28:1,0,255	0/0:17,0:16:9.03:0,9,126	1/1:4,1:4:5.99:53,6,0	1/1:7,2:8:6.02:66,6,0	1/1:4,4:8:12.50:132,13,0	1/1:10,0:11:5.85:47,6,0	0/0:30,0:30:18.52:0,19,242	0/0:23,0:23:24.07:0,24,317	0/0:13,0:15:6.01:0,6,71
chr10	90247528	.	C	CTT	3804.89	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-4.188;DP=400;FS=4.465;HRun=12;HaplotypeScore=50.9738;InbreedingCoeff=0.8464;MQ=65.81;MQ0=12;MQRankSum=0.114;QD=18.74;ReadPosRankSum=1.964;VQSLOD=2.5064;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,10:21:35.60:462,36,0	1/1:0,0:2:6.01:57,6,0	0/0:14,0:9:3.67:0,4,38	0/0:10,0:9:14.95:0,15,132	1/1:4,12:15:5.25:347,5,0	0/0:17,0:18:38.76:0,39,345	0/0:12,0:12:29.99:0,30,277	0/0:36,0:32:53.46:0,53,480	1/1:4,10:14:21.07:295,21,0	1/1:2,11:13:27.04:355,27,0	1/1:6,4:11:15.52:211,16,0	1/1:5,1:8:6.75:54,7,0	1/1:2,6:8:9.03:126,9,0	1/1:1,3:4:6.02:84,6,0	1/1:6,2:14:12.03:142,12,0	1/1:6,13:21:31.92:425,32,0	1/1:6,2:20:12.54:241,13,0	1/1:4,15:17:29.59:387,30,0	0/0:22,0:24:37.13:0,37,329	0/0:12,0:12:27:0,27,250	0/0:8,0:7:8.99:0,9,83	1/1:1,1:1:3.01:42,3,0	1/1:5,2:7:6.02:84,6,0	1/1:3,4:9:17.53:190,18,0	1/1:1,7:9:23.57:303,24,0	0/0:22,1:24:17.67:0,18,467	0/0:23,0:23:59.98:0,60,554	0/0:15,0:14:29.98:0,30,278
chr10	90250449	.	C	CA	439	PASS	AB=0.855;AC=24;AF=0.480;AN=50;BaseQRankSum=2.928;DP=143;FS=17.287;HRun=0;HaplotypeScore=117.1841;InbreedingCoeff=-0.3253;MQ=49.29;MQ0=0;MQRankSum=-2.404;QD=3.78;ReadPosRankSum=1.710;VQSLOD=1.8360;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:57.38:89,0,57	1/1:2,0:2:2.60:10,3,0	0/0:4,0:2:6.03:0,6,31	./.	0/0:7,0:7:2.25:0,2,25	0/1:9,1:10:39.44:85,0,39	0/1:4,1:5:32.01:38,0,32	0/1:4,7:11:11.21:11,0,52	0/1:4,1:5:31.21:51,0,31	0/1:5,1:6:4.61:5,0,55	0/0:1,0:1:1.55:0,2,4	0/0:8,0:8:11.55:0,12,153	0/1:4,1:5:22.50:27,0,23	0/1:3,2:5:1.26:18,0,1	0/0:4,0:4:3.59:0,4,10	0/1:4,0:4:14.11:14,0,40	0/1:4,1:5:19.72:20,0,45	0/1:3,0:3:4.93:5,0,14	0/1:1,2:3:2.37:7,0,2	1/1:2,1:3:3.66:46,4,0	1/1:3,1:3:0.89:2,1,0	0/1:5,0:5:32.19:32,0,41	0/1:5,0:5:0.45:27,0,0	./.	1/1:1,0:1:3.01:32,3,0	0/1:11,1:12:22.37:22,0,149	0/1:5,3:8:28.82:29,0,34	./.
chr10	90250452	.	TCTCC	T	142.97	PASS	AB=0.787;AC=14;AF=0.259;AN=54;BaseQRankSum=3.003;DP=171;FS=30.502;HRun=0;HaplotypeScore=64.2164;InbreedingCoeff=-0.2017;MQ=48.01;MQ0=3;MQRankSum=-5.694;QD=2.01;ReadPosRankSum=3.323;VQSLOD=-0.2179;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:5.22:0,5,492	0/0:2,0:2:5.69:0,6,43	0/0:8,0:3:9.03:0,9,204	0/0:4,0:2:3.01:0,3,73	0/0:7,0:7:6.02:0,6,162	0/1:9,1:10:27.82:28,0,170	0/1:5,1:6:16.73:17,0,160	0/1:4,7:11:56.12:56,0,134	0/1:5,1:6:24.50:25,0,127	0/1:5,1:6:27.26:27,0,201	0/0:3,0:3:6.02:0,6,90	0/0:8,0:8:22.80:0,23,453	0/0:6,1:7:3.49:0,3,229	0/1:4,2:6:29.49:29,0,72	0/0:5,0:5:8.68:0,9,52	0/0:5,0:5:13.22:0,13,212	0/1:4,1:5:7.33:7,0,173	0/0:4,0:4:8.62:0,9,132	0/1:2,2:4:4.44:4,0,54	0/1:3,1:4:26.51:27,0,66	1/1:3,1:3:3:25,3,0	0/0:6,0:6:5.21:0,5,158	0/0:6,0:5:0.80:0,1,70	0/0:4,0:3:2.97:0,3,20	1/1:1,0:1:0.47:1,0,0	0/0:12,1:13:25.72:0,26,542	0/1:5,3:8:31.13:31,0,131	./.
chr10	90250456	.	C	CCT	1703.90	PASS	AB=0.752;AC=21;AF=0.375;AN=56;BaseQRankSum=1.273;DP=214;FS=91.050;HRun=0;HaplotypeScore=62.4506;InbreedingCoeff=-0.5223;MQ=48.71;MQ0=6;MQRankSum=-7.791;QD=11.21;ReadPosRankSum=6.317;VQSLOD=-0.5426;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,7:18:99:164,0,256	0/1:1,1:2:25.39:48,0,25	0/0:12,0:3:9.50:0,10,131	0/0:12,0:4:5.84:0,6,69	0/0:7,3:10:6.02:0,6,92	0/1:4,6:10:71.45:137,0,71	0/1:7,2:8:75.46:75,0,102	0/1:14,0:13:67.69:68,0,79	0/1:5,2:7:28.81:29,0,93	0/1:5,1:6:53.73:54,0,104	0/0:4,1:5:5.83:0,6,83	0/1:6,3:9:65.04:65,0,221	0/1:4,3:7:99:174,0,114	0/1:5,2:7:33.89:113,0,34	0/1:3,2:5:30.89:44,0,31	0/1:4,3:7:89.47:89,0,117	0/1:6,2:8:72.96:73,0,95	0/1:3,1:4:45.75:46,0,76	0/1:5,1:6:46.74:68,0,47	0/1:4,1:5:35.65:79,0,36	1/1:5,0:4:3.01:36,3,0	0/0:5,3:8:3.18:0,3,88	0/0:4,4:7:7.95:0,8,71	0/0:3,2:4:2.97:0,3,20	0/1:0,1:1:0:0,0,0	0/1:8,5:13:99:230,0,239	0/1:4,4:8:22.99:259,0,23	0/0:2,0:2:2.99:0,3,24
chr10	90250470	.	TCTC	T	3982.26	PASS	AB=0.738;AC=48;AF=0.889;AN=54;BaseQRankSum=-0.170;DP=264;FS=19.759;HRun=0;HaplotypeScore=59.3339;InbreedingCoeff=0.3505;MQ=52.31;MQ0=10;MQRankSum=1.532;QD=18.78;ReadPosRankSum=1.640;VQSLOD=1.7615;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,13:21:26.66:395,27,0	./.	0/0:26,0:7:11.04:0,11,275	0/0:24,0:7:9.20:0,9,179	1/1:4,8:12:21.03:275,21,0	1/1:10,3:13:14.19:166,14,0	1/1:4,4:7:14.94:192,15,0	1/1:11,1:11:4.80:84,5,0	1/1:3,4:7:8.33:131,8,0	1/1:6,2:8:15.01:195,15,0	1/1:3,4:7:14.30:186,14,0	1/1:3,6:9:16.24:260,16,0	1/1:4,3:7:8.98:132,9,0	1/1:5,2:7:6.02:88,6,0	1/1:2,4:6:8.98:132,9,0	1/1:3,4:7:11.85:175,12,0	0/1:3,6:9:20.71:201,0,21	1/1:2,2:4:6.02:88,6,0	0/1:6,1:6:25.99:96,0,26	1/1:5,1:6:6.02:87,6,0	1/1:4,2:5:12:150,12,0	1/1:3,5:8:14.55:195,15,0	1/1:6,5:9:8.53:131,9,0	1/1:2,6:7:12.04:176,12,0	1/1:1,3:4:5.65:56,6,0	1/1:6,4:10:11.87:175,12,0	1/1:7,3:10:8.03:96,8,0	1/1:1,3:4:6.15:121,6,0
chr10	90250735	.	AAGCC	A	1320.36	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.305;DP=483;FS=0.735;HRun=0;HaplotypeScore=100.8100;InbreedingCoeff=0.9092;MQ=75.43;MQ0=0;MQRankSum=-3.432;QD=40.01;ReadPosRankSum=2.271;VQSLOD=3.9367;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:81.28:0,81,2079	1/1:0,5:5:15.05:267,15,0	0/0:27,0:27:60.20:0,60,1310	0/0:22,0:21:51.18:0,51,1188	0/0:13,0:13:36.12:0,36,928	0/0:21,0:21:60.21:0,60,1542	0/0:20,0:20:60.21:0,60,1549	0/0:29,0:29:69.23:0,69,1704	0/0:24,0:23:60.21:0,60,1541	0/0:11,0:11:27.09:0,27,697	0/0:4,0:4:9.03:0,9,231	0/0:24,0:24:54.19:0,54,1390	0/0:21,0:21:57.20:0,57,1434	0/0:17,0:17:45.15:0,45,1159	1/1:0,14:14:42.09:713,42,0	0/0:11,0:11:33.11:0,33,851	1/1:2,12:14:27.09:481,27,0	0/0:18,0:18:48.15:0,48,1178	0/0:21,0:21:48.16:0,48,1236	0/0:12,0:12:30.10:0,30,764	0/0:23,0:23:63.20:0,63,1573	0/0:6,0:6:12.04:0,12,271	0/0:12,0:12:30.10:0,30,743	0/0:27,0:27:72.23:0,72,1761	0/0:3,0:3:6.02:0,6,148	0/0:13,0:13:36.12:0,36,929	0/0:33,0:32:90.26:0,90,2129	0/0:3,0:3:9.03:0,9,232
chr10	90250815	.	T	TGGAAGGAA	8388.61	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=8.973;DP=490;FS=6.740;HRun=0;HaplotypeScore=164.8528;InbreedingCoeff=0.7104;MQ=58.74;MQ0=5;MQRankSum=-10.280;QD=25.65;ReadPosRankSum=-3.331;VQSLOD=3.5259;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,13:41:39.13:1389,39,0	1/1:3,0:3:6.02:205,6,0	0/0:15,0:10:5.99:0,6,64	0/0:11,0:10:6.01:0,6,101	1/1:19,0:19:6.01:149,6,0	0/0:12,0:12:27.09:0,27,681	0/0:26,0:26:16.27:0,16,829	0/1:31,0:31:16.28:16,0,566	1/1:22,1:26:21.48:994,21,0	1/1:15,0:17:27.04:666,27,0	1/1:7,0:7:8.95:133,9,0	1/1:12,0:15:24.08:781,24,0	1/1:23,0:26:27.09:848,27,0	1/1:16,0:16:3.01:77,3,0	1/1:22,0:22:12.01:258,12,0	1/1:17,1:20:12.04:384,12,0	1/1:17,0:17:27.08:639,27,0	0/1:11,0:11:66.40:142,0,66	0/0:18,0:18:30.10:0,30,730	0/0:14,0:14:24.08:0,24,606	0/0:16,0:16:30.10:0,30,757	1/1:7,0:9:9.03:310,9,0	1/1:6,0:6:3.01:89,3,0	1/1:30,0:30:38.78:866,39,0	1/1:9,0:8:15.05:442,15,0	0/0:20,0:21:48.16:0,48,1192	0/0:26,0:26:63.20:0,63,1504	0/0:4,0:4:12.04:0,12,252
chr10	90251147	.	GT	G	1628.47	PASS	AB=0.757;AC=35;AF=0.625;AN=56;BaseQRankSum=6.688;DP=517;FS=16.868;HRun=16;HaplotypeScore=76.6974;InbreedingCoeff=0.3485;MQ=69.72;MQ0=3;MQRankSum=0.323;QD=4.40;ReadPosRankSum=3.652;VQSLOD=0.2516;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,14:31:26.25:170,26,0	1/1:6,0:16:18.05:52,18,0	0/0:42,0:17:11.82:0,12,148	0/1:25,0:13:1.24:12,0,1	0/1:11,12:25:13.03:118,0,13	0/1:8,3:12:9.46:9,0,118	0/0:14,0:15:20.80:0,21,160	0/0:27,0:29:12.97:0,13,229	0/1:5,10:15:7.83:112,0,8	1/1:7,10:18:31.35:184,31,0	0/1:10,9:19:17.09:83,0,17	1/1:3,3:6:2.86:18,3,0	1/1:4,6:11:16.59:94,17,0	1/1:9,4:13:1.71:72,2,0	1/1:3,0:11:16.25:47,16,0	1/1:6,7:13:23.07:134,23,0	1/1:4,0:17:20.30:59,20,0	1/1:6,5:13:19.15:110,19,0	0/0:13,0:13:16.89:0,17,116	0/1:21,6:29:39.73:40,0,277	0/1:8,3:13:4.77:5,0,117	0/1:7,7:14:2.05:110,0,2	1/1:9,13:22:7.50:124,7,0	1/1:0,8:9:23.45:142,23,0	1/1:9,4:14:9.64:113,10,0	0/0:24,0:24:29.95:0,30,248	0/1:18,3:22:6.17:6,0,153	0/0:20,0:24:25.84:0,26,279
chr10	90251434	.	G	GA	5015.89	PASS	AB=0.576;AC=26;AF=0.464;AN=56;BaseQRankSum=-7.485;DP=574;FS=9.951;HRun=12;HaplotypeScore=68.3494;InbreedingCoeff=0.8369;MQ=73.54;MQ0=0;MQRankSum=-0.081;QD=16.61;ReadPosRankSum=0.718;VQSLOD=5.5991;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:34:50.04:634,50,0	0/0:10,0:10:23.83:0,24,175	0/0:18,0:18:13.10:0,13,81	0/0:14,0:11:8.86:0,9,61	1/1:11,21:34:34.85:472,35,0	0/0:25,0:26:61.66:0,62,441	0/0:14,1:15:6.59:0,7,212	0/0:15,3:21:2.31:0,2,164	1/1:4,9:15:26.04:271,26,0	1/1:6,26:32:53.12:651,53,0	1/1:8,18:27:16.05:426,16,0	0/1:4,8:12:0.88:152,0,1	1/1:2,14:17:35.85:325,36,0	1/1:1,11:13:14.09:157,14,0	0/0:19,0:20:46.71:0,47,334	1/1:4,15:19:14.10:288,14,0	0/0:18,0:18:34.25:0,34,246	1/1:3,19:23:41.06:547,41,0	0/0:13,0:16:32.91:0,33,214	0/0:25,0:26:34.62:0,35,374	0/0:13,0:14:22.86:0,23,159	1/1:2,11:14:13.94:274,14,0	1/1:8,20:29:38.90:364,39,0	0/1:4,17:21:1.75:308,0,2	1/1:2,10:12:15.02:146,15,0	0/0:27,0:28:55.64:0,56,400	0/0:31,0:33:84.50:0,85,601	0/0:11,0:11:5.05:0,5,134
chr10	90252491	.	A	ATCTT	10051.18	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=2.466;DP=316;FS=0.758;HRun=0;HaplotypeScore=55.0871;InbreedingCoeff=0.9623;MQ=87.25;MQ0=0;MQRankSum=-4.063;QD=58.10;ReadPosRankSum=3.469;VQSLOD=5.5895;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:51.17:1315,51,0	1/1:1,5:7:15.05:339,15,0	0/0:14,0:14:16.16:0,16,485	0/0:15,0:14:33.11:0,33,564	1/1:2,9:11:30.10:763,30,0	0/0:10,0:10:30.10:0,30,547	0/0:14,0:14:42.11:0,42,681	0/0:11,0:11:33.10:0,33,549	1/1:2,9:10:21.03:480,21,0	1/1:1,8:10:27.07:564,27,0	1/1:0,6:6:18.06:460,18,0	1/1:1,8:9:21.04:485,21,0	1/1:3,3:6:9.03:229,9,0	1/1:1,11:13:36.12:906,36,0	1/1:0,6:6:15.05:387,15,0	1/1:2,7:10:24.08:616,24,0	1/1:2,16:18:42.14:1083,42,0	1/1:1,5:7:9.03:228,9,0	0/0:13,0:13:36.12:0,36,646	0/0:14,0:14:42.12:0,42,699	0/0:21,0:21:54.16:0,54,923	1/1:1,7:8:21.07:536,21,0	1/1:2,4:6:15.01:318,15,0	1/1:3,13:17:36:806,36,0	1/1:1,6:7:21.07:537,21,0	0/0:17,0:17:48.07:0,48,812	0/0:11,0:11:33.06:0,33,571	0/0:3,0:3:9.03:0,9,166
chr10	90254100	.	C	CTG	2165.57	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=11.101;DP=672;FS=13.460;HRun=0;HaplotypeScore=155.7002;InbreedingCoeff=0.6556;MQ=49.07;MQ0=27;MQRankSum=-4.023;QD=6.50;ReadPosRankSum=0.642;VQSLOD=2.2657;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:45,0:43:23.81:24,0,53	1/1:7,0:7:7.49:30,7,0	0/0:28,0:13:30.29:0,30,332	0/0:65,0:22:2.16:0,2,119	1/1:22,6:26:15.64:177,16,0	0/0:17,0:17:10.34:0,10,655	0/0:23,0:23:60.18:0,60,862	0/0:46,0:37:99:0,102,1352	1/1:18,0:17:8.87:140,9,0	1/1:14,3:17:26.75:307,27,0	1/1:16,2:18:12.33:112,12,0	1/1:19,0:19:21.89:188,22,0	1/1:13,0:13:14.11:118,14,0	1/1:13,3:16:20.03:189,20,0	0/1:17,0:17:29.77:53,0,30	1/1:13,1:14:9.37:103,9,0	0/1:22,0:22:46.95:47,0,73	1/1:13,4:17:0.79:242,1,0	0/0:26,0:21:52.77:0,53,676	0/0:15,0:15:42.14:0,42,638	0/0:47,0:47:99:0,135,1819	1/1:16,2:17:20.98:206,21,0	1/1:9,2:11:2.84:39,3,0	1/1:23,11:34:23.60:271,24,0	1/1:18,1:19:17.10:127,17,0	0/0:37,0:36:99:0,108,1546	0/0:24,0:24:69.21:0,69,1011	0/0:11,0:11:33.05:0,33,444
chr10	90254102	.	C	CTG	1182.57	PASS	AB=0.909;AC=19;AF=0.339;AN=56;BaseQRankSum=10.869;DP=677;FS=15.233;HRun=0;HaplotypeScore=163.3984;InbreedingCoeff=0.2444;MQ=48.83;MQ0=26;MQRankSum=-3.565;QD=4.62;ReadPosRankSum=2.289;VQSLOD=1.9215;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:44:30.24:0,30,200	0/1:7,0:7:5.04:5,0,11	0/0:27,0:13:26.40:0,26,300	0/0:66,0:21:14.15:0,14,164	0/1:24,6:28:18:114,0,18	0/0:18,0:18:47.83:0,48,711	0/0:22,0:22:63.17:0,63,888	0/0:45,0:36:72.28:0,72,1273	1/1:18,0:17:5.13:123,5,0	0/1:13,3:16:9.93:225,0,10	0/1:17,2:19:17.11:29,0,17	1/1:19,0:19:0.91:78,1,0	0/1:16,0:16:0.92:51,0,1	1/1:13,3:16:2.23:128,2,0	0/0:18,0:18:16.63:0,17,122	0/1:13,1:14:7.38:82,0,7	0/0:22,0:22:35.51:0,36,258	0/1:13,4:17:65:136,0,65	0/0:24,0:20:50.29:0,50,676	0/0:14,0:14:42.14:0,42,642	0/0:48,0:48:99:0,132,1816	0/1:18,2:19:5.44:111,0,5	1/1:9,2:11:2.84:39,3,0	1/1:22,11:33:9.43:201,9,0	0/1:19,1:20:24.96:25,0,50	0/0:38,0:37:99:0,111,1587	0/0:23,0:23:69.19:0,69,1027	0/0:10,0:10:30.08:0,30,424
chr10	90254118	.	CTCTCTG	C	1857.94	PASS	AB=0.741;AC=25;AF=0.463;AN=54;BaseQRankSum=8.947;DP=703;FS=1.261;HRun=0;HaplotypeScore=187.0751;InbreedingCoeff=0.7282;MQ=48.94;MQ0=22;MQRankSum=-7.573;QD=5.86;ReadPosRankSum=-0.942;VQSLOD=2.5943;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,35:46:0.22:2,0,0	0/0:6,0:6:7.78:0,8,42	0/0:30,0:12:8.37:0,8,233	0/0:67,0:17:15.35:0,15,267	1/1:18,9:25:0.12:1,0,0	0/0:20,0:20:52.73:0,53,1497	0/0:22,0:22:42.14:0,42,948	0/0:39,0:29:60.20:0,60,1250	1/1:11,6:16:14.81:182,15,0	1/1:14,2:16:36.09:509,36,0	0/1:6,10:16:0:0,0,0	1/1:8,11:19:21.02:271,21,0	1/1:8,9:17:17.50:255,18,0	1/1:8,9:17:2.76:38,3,0	0/0:21,0:21:21.76:0,22,125	1/1:6,8:14:18.01:236,18,0	0/1:20,0:20:16.43:90,0,16	1/1:8,18:27:12.01:202,12,0	0/0:21,0:18:30.09:0,30,800	0/0:18,0:18:52.39:0,52,1361	0/0:53,0:52:99:0,123,3214	1/1:22,3:24:14.47:220,14,0	0/1:5,9:14:0.04:0,0,1	1/1:17,23:40:2.26:36,2,0	./.	0/0:37,0:36:84.27:0,84,2271	0/0:22,0:22:54.17:0,54,1502	0/0:11,0:11:24.08:0,24,523
chr10	90254130	.	GTC	G	446.72	PASS	AB=0.912;AC=8;AF=0.143;AN=56;BaseQRankSum=9.971;DP=692;FS=9.619;HRun=0;HaplotypeScore=156.8205;InbreedingCoeff=-0.1046;MQ=51.21;MQ0=28;MQRankSum=-8.037;QD=3.04;ReadPosRankSum=1.187;VQSLOD=2.3135;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:8.99:0,9,93	0/0:4,2:6:7.25:0,7,30	0/0:45,1:17:5.45:0,5,369	0/0:75,1:22:28.47:0,28,452	0/0:22,0:21:2.80:0,3,47	0/0:18,0:18:48.05:0,48,909	0/0:21,0:21:57.17:0,57,948	0/0:34,0:30:79.18:0,79,1308	0/1:15,0:14:7.41:70,0,7	0/1:13,1:14:4.84:166,0,5	0/0:17,0:17:5.87:0,6,100	0/1:18,0:18:2.20:2,0,42	0/1:18,0:18:30.07:70,0,30	0/0:13,0:13:2.59:0,3,12	0/1:12,7:19:14.24:47,0,14	0/1:16,0:16:47.59:48,0,83	0/1:10,10:20:38.92:91,0,39	0/1:26,1:27:80.56:81,0,113	0/0:15,0:12:36.10:0,36,581	0/0:20,0:20:58.41:0,58,964	0/0:51,0:51:99:0,144,2481	0/0:21,0:21:10.13:0,10,50	0/0:16,1:16:9.03:0,9,147	0/0:36,2:38:11.72:0,12,150	0/0:18,0:18:2.97:0,3,22	0/0:33,0:32:90.29:0,90,1566	0/0:20,0:20:60.19:0,60,1033	0/0:8,0:8:24.08:0,24,408
chr10	90254132	.	C	CTG	599.19	PASS	AB=0.976;AC=11;AF=0.196;AN=56;BaseQRankSum=9.207;DP=710;FS=2.203;HRun=0;HaplotypeScore=163.7564;InbreedingCoeff=0.1087;MQ=51.96;MQ0=27;MQRankSum=-7.240;QD=3.72;ReadPosRankSum=-3.333;VQSLOD=2.5174;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,1:45:9.23:0,9,92	1/1:3,4:7:4.55:13,5,0	0/0:53,0:17:14.07:0,14,363	0/0:79,0:24:30.38:0,30,411	0/0:24,0:23:5.66:0,6,69	0/0:18,0:18:54.18:0,54,813	0/0:22,0:22:60.16:0,60,864	0/0:34,0:31:89.72:0,90,1250	0/1:16,0:15:42.47:82,0,42	0/1:15,0:15:99:121,0,109	0/0:18,0:18:8.69:0,9,116	0/0:18,0:18:17.86:0,18,194	0/1:19,0:19:31.21:31,0,113	0/0:14,0:14:2.65:0,3,38	1/1:12,8:20:21.14:245,21,0	0/1:16,0:16:63.51:64,0,157	0/1:17,3:20:29.39:135,0,29	0/1:27,0:28:53.07:53,0,135	0/0:15,0:12:36.11:0,36,525	0/0:20,0:20:58.41:0,58,829	0/0:50,0:50:99:0,144,2136	0/1:20,0:20:1.02:1,0,158	0/0:17,0:16:8.30:0,8,131	0/0:37,0:37:11.41:0,11,169	0/0:19,0:19:2.59:0,3,22	0/0:34,0:33:90.28:0,90,1352	0/0:20,0:20:60.19:0,60,893	0/0:8,0:8:24.08:0,24,362
chr10	90254148	.	G	GTC	101.70	PASS	AB=0.810;AC=6;AF=0.107;AN=56;BaseQRankSum=6.952;DP=759;FS=0.843;HRun=0;HaplotypeScore=169.7655;InbreedingCoeff=0.6056;MQ=58.58;MQ0=28;MQRankSum=-5.387;QD=2.37;ReadPosRankSum=-3.093;VQSLOD=1.9709;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:50:30.13:0,30,368	1/1:10,0:10:10.85:51,11,0	0/0:74,0:20:36.06:0,36,330	0/0:99,0:39:28.95:0,29,472	0/0:20,0:19:17.71:0,18,223	0/0:20,0:20:44.70:0,45,553	0/0:21,0:21:49.80:0,50,636	0/0:28,0:28:63.16:0,63,752	0/0:18,0:17:20.89:0,21,259	0/0:14,0:14:33.08:0,33,388	0/0:16,0:16:8.70:0,9,111	0/0:19,0:19:27.08:0,27,334	0/0:22,0:22:23.57:0,24,271	0/0:14,0:14:8.79:0,9,111	1/1:17,0:17:21.42:97,21,0	0/0:16,0:16:24.08:0,24,297	0/1:8,3:11:7.13:50,0,7	0/0:30,0:30:36.54:0,37,429	0/0:18,0:15:33.09:0,33,401	0/0:18,0:18:45.13:0,45,545	0/0:60,0:59:99:0,130,1784	0/0:21,0:21:20.76:0,21,260	0/0:20,0:19:20.20:0,20,242	0/0:42,0:42:26.45:0,26,334	0/0:22,0:22:17.33:0,17,222	0/0:30,0:30:81.26:0,81,1017	0/0:21,0:21:48.15:0,48,605	0/1:4,1:5:34.82:35,0,136
chr10	90254151	.	T	TCTCG	553.29	PASS	AB=0.786;AC=5;AF=0.089;AN=56;BaseQRankSum=6.760;DP=766;FS=4.186;HRun=0;HaplotypeScore=185.4398;InbreedingCoeff=0.6922;MQ=60.98;MQ0=29;MQRankSum=-1.552;QD=14.56;ReadPosRankSum=-2.570;VQSLOD=2.5012;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:50:31.94:0,32,522	1/1:6,3:10:13.24:143,13,0	0/0:77,0:20:47.42:0,47,590	0/0:103,0:45:11.13:0,11,778	0/0:19,0:18:17.79:0,18,307	0/0:20,0:20:57.14:0,57,904	0/0:21,0:21:56.54:0,57,986	0/0:30,0:30:87.24:0,87,1348	0/0:17,0:16:22.01:0,22,365	0/0:13,0:13:33.08:0,33,546	0/0:16,0:16:8.87:0,9,171	0/0:19,0:19:33.02:0,33,522	0/0:22,0:22:29.68:0,30,467	0/0:12,0:12:8.87:0,9,155	1/1:9,8:17:21.03:410,21,0	0/0:16,0:16:24.08:0,24,438	0/1:8,3:11:26.14:125,0,26	0/0:33,0:33:42.95:0,43,599	0/0:19,0:16:41.60:0,42,620	0/0:17,0:17:51.15:0,51,881	0/0:63,0:62:99:0,174,2850	0/0:23,0:23:27.07:0,27,434	0/0:20,0:19:20.33:0,20,313	0/0:41,0:41:26.66:0,27,463	0/0:22,0:22:21.02:0,21,319	0/0:30,0:30:84.28:0,84,1515	0/0:18,0:18:51.16:0,51,902	0/0:5,0:5:9.58:0,10,223
chr10	90255819	.	A	AG	2178.52	PASS	AB=0.797;AC=22;AF=0.393;AN=56;BaseQRankSum=-2.625;DP=442;FS=41.129;HRun=0;HaplotypeScore=59.2573;InbreedingCoeff=0.3288;MQ=57.50;MQ0=12;MQRankSum=6.223;QD=9.12;ReadPosRankSum=6.249;VQSLOD=1.4442;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:39,3:40:36.61:315,0,37	0/0:14,0:13:26.29:0,26,181	0/0:20,0:8:11.02:0,11,146	0/1:7,0:2:0.73:2,0,1	1/1:6,17:23:41.52:345,42,0	0/0:14,0:13:35.57:0,36,254	0/0:13,0:11:32.71:0,33,246	0/0:29,0:28:53.13:0,53,368	0/1:6,10:16:26.65:120,0,27	1/1:4,17:20:24.20:367,24,0	1/1:2,17:20:17.76:281,18,0	0/1:7,2:9:25.02:92,0,25	0/1:7,1:8:26.36:43,0,26	0/1:15,2:16:5.57:156,0,6	0/0:12,0:12:20.87:0,21,162	1/1:2,6:8:4.74:75,5,0	0/0:32,0:32:61.84:0,62,514	0/1:8,9:16:32.79:41,0,33	0/0:21,0:21:55.30:0,55,343	0/0:13,0:13:35.21:0,35,254	0/1:2,0:2:2.03:2,0,22	1/1:0,6:7:12:114,12,0	0/1:5,16:21:9.15:152,0,9	1/1:2,5:6:15.02:148,15,0	0/1:4,7:11:6.43:112,0,6	0/0:14,0:14:37.04:0,37,283	0/0:9,0:8:20.35:0,20,144	0/0:12,0:11:32.66:0,33,235
chr10	90256606	.	C	CA	9653.49	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-5.661;DP=543;FS=9.097;HRun=1;HaplotypeScore=60.6085;InbreedingCoeff=0.9959;MQ=68.95;MQ0=0;MQRankSum=-2.693;QD=39.24;ReadPosRankSum=1.972;VQSLOD=5.2001;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:81.27:1214,81,0	0/0:7,0:7:21.07:0,21,273	0/0:20,0:18:40.71:0,41,529	0/0:18,0:17:42.08:0,42,515	1/1:0,11:11:30.10:449,30,0	0/0:20,0:20:60.20:0,60,779	0/0:28,0:28:81.25:0,81,1035	0/0:18,0:18:50.53:0,51,631	1/1:0,26:26:69.23:1034,69,0	1/1:0,12:12:36.12:539,36,0	1/1:0,11:11:33.07:469,33,0	1/1:1,14:15:36.08:514,36,0	1/1:0,18:18:51.11:739,51,0	1/1:1,11:12:30.10:448,30,0	0/0:29,0:29:84.23:0,84,1058	1/1:1,22:23:63.21:944,63,0	0/0:33,0:33:99:0,99,1285	1/1:0,16:16:45.11:649,45,0	0/0:12,0:12:33.10:0,33,416	0/0:16,0:16:48.16:0,48,622	0/0:41,0:41:99:0,108,1440	1/1:0,6:6:15.05:225,15,0	1/1:0,17:17:39.13:584,39,0	1/1:2,29:31:81.73:1215,82,0	1/1:0,18:18:42.14:630,42,0	0/0:25,1:26:33.27:0,33,917	0/0:22,0:22:63.20:0,63,815	0/0:7,0:7:18.06:0,18,232
chr10	90258286	.	C	CT	3187.84	PASS	AB=0.667;AC=17;AF=0.304;AN=56;BaseQRankSum=-8.481;DP=589;FS=8.404;HRun=11;HaplotypeScore=67.3300;InbreedingCoeff=0.6875;MQ=67.55;MQ0=2;MQRankSum=-1.595;QD=14.90;ReadPosRankSum=-0.340;VQSLOD=3.5747;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,1:45:76.81:0,77,765	0/0:13,0:13:23.88:0,24,186	0/0:10,0:7:6.47:0,6,43	0/0:13,0:13:11.26:0,11,138	0/0:32,0:33:43.18:0,43,495	1/1:2,13:15:27.01:264,27,0	1/1:11,7:18:11.86:286,12,0	1/1:4,27:31:75.07:734,75,0	0/0:14,1:15:5.40:0,5,225	0/0:22,0:22:23.94:0,24,282	0/0:17,1:18:5.88:0,6,225	0/0:18,0:18:38.81:0,39,300	0/0:16,1:17:5.58:0,6,242	0/0:17,0:19:45.90:0,46,337	0/0:20,0:20:35.82:0,36,278	0/0:15,0:15:37.89:0,38,284	0/0:30,0:31:78.77:0,79,592	0/0:23,0:23:56.71:0,57,426	1/1:10,13:24:38.91:379,39,0	1/1:10,16:26:44.95:412,45,0	0/1:4,16:20:15.66:385,0,16	0/1:18,2:20:16.07:16,0,255	0/0:17,1:19:16.22:0,16,260	0/0:26,0:28:72.66:0,73,533	0/0:15,0:15:10.68:0,11,88	1/1:18,14:31:39.94:548,40,0	1/1:4,14:19:13.49:225,13,0	0/1:1,6:7:5.17:134,0,5
chr10	90258797	.	GTC	G	142.48	PASS	AB=0.980;AC=16;AF=0.286;AN=56;BaseQRankSum=8.697;DP=375;FS=6.903;HRun=0;HaplotypeScore=69.9933;InbreedingCoeff=-0.2582;MQ=66.40;MQ0=8;MQRankSum=-0.070;QD=0.79;ReadPosRankSum=5.624;VQSLOD=-0.1624;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:43.79:0,44,285	0/0:7,0:7:21.03:0,21,265	0/0:19,0:9:5.62:0,6,87	0/0:24,0:12:19.24:0,19,143	0/1:17,0:17:34.45:34,0,69	0/1:25,0:25:19.82:20,0,138	0/1:5,0:5:9.65:10,0,10	0/0:28,0:26:14.31:0,14,209	1/1:3,0:3:0.47:1,0,0	0/0:12,1:13:21.24:0,21,189	0/0:14,0:14:16.46:0,16,112	0/1:12,0:12:14.22:14,0,81	0/1:5,0:5:7.48:7,0,47	0/1:9,1:9:29.50:43,0,29	0/0:13,0:13:30.07:0,30,410	0/1:11,0:11:5.68:6,0,79	0/0:25,0:24:62.90:0,63,812	0/1:13,0:11:4.01:26,0,4	0/0:11,0:11:13.62:0,14,171	0/1:12,1:13:24.02:24,0,103	0/0:4,0:4:7.16:0,7,51	0/1:7,1:8:29.41:29,0,71	0/1:8,0:8:13.73:14,0,52	0/0:4,0:4:0.58:0,1,32	0/1:11,0:11:23.08:26,0,23	0/1:18,0:17:6.35:6,0,127	0/1:21,0:20:27.27:27,0,104	0/0:11,0:10:14.60:0,15,129
chr10	90258799	.	CTT	C	2752.32	PASS	AB=0.670;AC=40;AF=0.714;AN=56;BaseQRankSum=-1.118;DP=382;FS=6.492;HRun=16;HaplotypeScore=62.0888;InbreedingCoeff=0.5620;MQ=65.34;MQ0=17;MQRankSum=1.931;QD=10.31;ReadPosRankSum=2.698;VQSLOD=2.1586;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:20:32.05:0,32,147	0/0:7,0:7:12.04:0,12,157	0/0:19,0:9:5.98:0,6,50	0/0:24,0:12:11.13:0,11,83	1/1:8,8:18:12.82:185,13,0	1/1:10,14:25:15.34:298,15,0	1/1:1,4:5:8.97:75,9,0	1/1:11,16:26:32.22:303,32,0	1/1:0,3:3:2.96:25,3,0	1/1:8,4:12:11.83:100,12,0	0/1:3,8:12:8.71:105,0,9	1/1:5,6:12:8.89:117,9,0	1/1:4,3:6:5.96:50,6,0	1/1:5,6:9:1.11:130,1,0	0/0:12,0:14:33:0,33,379	0/1:5,5:11:0.43:94,0,0	0/0:26,0:26:63.30:0,63,673	1/1:4,9:11:23.96:201,24,0	1/1:7,4:10:11.92:100,12,0	1/1:7,5:12:14.89:125,15,0	1/1:2,1:4:5.73:37,6,0	0/1:7,1:8:8.37:39,0,8	1/1:3,5:8:8.98:75,9,0	0/1:1,2:4:0.01:42,0,0	1/1:2,9:10:23.90:201,24,0	1/1:7,9:17:32.37:247,32,0	1/1:7,13:20:35.58:288,36,0	1/1:5,4:10:5.90:92,6,0
chr10	90259003	.	ATT	A	1191.46	PASS	AB=0.775;AC=18;AF=0.321;AN=56;BaseQRankSum=2.632;DP=360;FS=9.977;HRun=16;HaplotypeScore=57.1255;InbreedingCoeff=0.6204;MQ=58.26;MQ0=6;MQRankSum=-1.726;QD=8.33;ReadPosRankSum=1.209;VQSLOD=0.2564;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:32:51.58:0,52,635	0/0:2,0:2:3.01:0,3,39	0/0:16,0:7:5.90:0,6,71	0/1:13,0:5:6.42:6,0,13	0/0:17,0:16:28.24:0,28,310	1/1:5,8:16:11.35:188,11,0	1/1:6,6:11:23.66:183,24,0	0/1:7,10:17:15.29:116,0,15	0/0:11,0:11:27.08:0,27,341	0/0:5,0:7:13.77:0,14,134	0/0:12,0:15:32.43:0,32,358	0/0:6,0:8:14.35:0,14,136	0/0:5,0:5:11.63:0,12,128	0/0:8,0:8:20.39:0,20,202	0/0:10,0:12:28.77:0,29,311	0/0:3,0:5:14.37:0,14,145	0/0:31,0:29:64.95:0,65,760	0/1:7,1:8:6.98:7,0,175	1/1:6,8:14:23.89:201,24,0	1/1:5,4:9:11.86:100,12,0	1/1:4,6:10:14.92:125,15,0	0/0:8,0:8:14.31:0,14,126	0/0:9,0:9:14.41:0,14,165	0/0:12,0:13:29.84:0,30,311	0/0:11,0:12:26.45:0,26,320	0/1:4,8:14:18.94:139,0,19	1/1:8,6:20:11.70:189,12,0	1/1:1,5:7:12.04:129,12,0
chr10	90260151	.	CA	C	1613.64	PASS	AB=0.717;AC=27;AF=0.482;AN=56;BaseQRankSum=-5.181;DP=395;FS=19.471;HRun=13;HaplotypeScore=58.4593;InbreedingCoeff=0.6188;MQ=82.41;MQ0=5;MQRankSum=0.003;QD=9.96;ReadPosRankSum=4.324;VQSLOD=1.0932;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,22:30:7.23:379,7,0	0/0:4,0:4:9.01:0,9,83	0/1:14,2:13:28.85:29,0,83	0/0:18,1:18:1.31:0,1,123	1/1:5,13:18:6.60:212,7,0	0/0:4,0:23:34.22:0,34,178	0/0:2,0:10:14.37:0,14,86	0/0:10,0:23:34.17:0,34,198	0/1:3,4:6:12.22:54,0,12	0/1:6,8:14:26.47:149,0,26	1/1:4,8:12:26.79:194,27,0	1/1:3,0:4:1.97:6,2,0	1/1:1,5:6:11.92:88,12,0	1/1:2,7:10:19.91:137,20,0	0/0:18,1:18:15.69:0,16,293	1/1:1,3:4:8.94:66,9,0	0/0:21,0:22:59.88:0,60,547	1/1:2,11:13:20.87:153,21,0	0/0:8,0:14:27.49:0,27,152	0/0:7,0:22:37.33:0,37,206	0/0:8,0:16:6.15:0,6,29	1/1:0,1:1:2.98:22,3,0	1/1:0,4:4:11.93:88,12,0	1/1:4,10:16:14.80:167,15,0	1/1:0,5:6:10.99:72,11,0	0/0:21,0:30:48.82:0,49,275	0/0:7,0:19:22.91:0,23,126	0/0:1,0:9:5.68:0,6,29
chr10	90260658	.	T	TG	3913.55	PASS	AB=0.793;AC=17;AF=0.304;AN=56;BaseQRankSum=-9.393;DP=594;FS=0.801;HRun=2;HaplotypeScore=75.7931;InbreedingCoeff=0.8544;MQ=54.47;MQ0=17;MQRankSum=0.383;QD=20.82;ReadPosRankSum=-1.632;VQSLOD=3.1982;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:34:92.44:0,92,775	0/0:6,0:6:9.01:0,9,165	0/0:9,0:3:5.48:0,5,47	0/0:14,0:5:3.01:0,3,34	0/0:38,0:35:89.76:0,90,747	1/1:2,8:10:23.96:267,24,0	1/1:3,18:22:22.88:328,23,0	1/1:1,24:25:59.55:654,60,0	0/0:22,0:21:50.93:0,51,435	0/0:22,0:20:50.33:0,50,432	0/0:19,0:19:44.87:0,45,371	0/0:18,0:18:38.57:0,39,299	0/0:11,0:10:16.56:0,17,135	0/0:17,0:17:35.91:0,36,300	0/0:24,0:24:33.16:0,33,540	0/0:20,0:20:47.21:0,47,401	0/0:39,0:38:78.46:0,78,863	0/0:15,0:14:35.97:0,36,307	1/1:3,17:19:44.68:511,45,0	1/1:4,17:19:34.97:379,35,0	1/1:4,19:22:11.92:451,12,0	0/0:18,0:17:35.98:0,36,313	0/0:26,0:25:56.19:0,56,448	0/0:29,0:29:65.88:0,66,554	0/0:22,0:21:44.97:0,45,383	0/1:17,6:22:27.52:448,0,28	1/1:3,23:26:29.86:413,30,0	1/1:6,11:15:37.92:462,38,0
chr10	90260660	.	GTT	G	4237.75	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-7.048;DP=582;FS=3.455;HRun=14;HaplotypeScore=81.7288;InbreedingCoeff=0.9282;MQ=54.29;MQ0=18;MQRankSum=3.369;QD=13.89;ReadPosRankSum=4.300;VQSLOD=4.2409;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:36:25.18:611,25,0	0/0:5,0:6:15.04:0,15,197	0/0:8,0:3:4.23:0,4,15	0/0:14,0:5:0:0,0,0	1/1:11,22:33:37.32:483,37,0	0/0:8,0:10:17.51:0,18,216	0/0:23,0:23:30.07:0,30,320	0/0:25,0:25:51.04:0,51,563	1/1:5,16:21:32.87:352,33,0	1/1:8,12:19:26.80:296,27,0	1/1:5,13:18:23.82:269,24,0	1/1:4,11:17:35.68:307,36,0	1/1:1,8:9:14.99:133,15,0	1/1:5,9:16:11.56:142,12,0	0/0:19,0:23:47.03:0,47,700	1/1:6,10:20:29.48:246,29,0	0/0:37,0:38:80.61:0,81,1051	1/1:4,10:15:32.56:274,33,0	0/0:20,0:19:35.94:0,36,369	0/0:18,0:17:27:0,27,259	0/0:20,0:21:39.08:0,39,412	1/1:4,13:17:23.92:269,24,0	1/1:8,16:24:35.01:339,35,0	1/1:8,15:27:5.93:304,6,0	1/1:7,13:20:17.83:213,18,0	0/0:19,1:22:17.24:0,17,417	0/0:25,0:25:36.05:0,36,379	0/0:14,0:15:39.07:0,39,390
chr10	90262121	.	TA	T	7655.04	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=10.836;DP=528;FS=18.137;HRun=3;HaplotypeScore=58.6839;InbreedingCoeff=0.9942;MQ=95.36;MQ0=0;MQRankSum=-2.552;QD=32.57;ReadPosRankSum=4.245;VQSLOD=3.0938;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:78.25:967,78,0	0/0:7,0:7:21.07:0,21,287	0/0:36,0:37:88.10:0,88,1200	0/0:19,0:20:44.62:0,45,587	1/1:1,19:20:56.88:706,57,0	0/0:14,0:14:42.14:0,42,605	0/0:25,0:25:75.25:0,75,1074	0/0:26,0:25:75.24:0,75,1060	1/1:0,21:21:60.19:744,60,0	1/1:1,19:20:54.17:665,54,0	1/1:0,10:10:21.07:260,21,0	1/1:1,16:17:42.13:521,42,0	1/1:0,12:12:36.11:446,36,0	1/1:1,17:18:45.14:558,45,0	0/0:20,0:20:60.20:0,60,864	1/1:1,12:13:36.11:446,36,0	0/0:37,0:37:99:0,111,1581	1/1:2,11:13:24.07:298,24,0	0/0:17,0:17:45.15:0,45,648	0/0:12,0:12:33.11:0,33,474	0/0:26,0:26:75.25:0,75,1080	1/1:0,17:17:42.13:521,42,0	1/1:1,11:12:30.09:372,30,0	1/1:1,16:17:45.14:558,45,0	1/1:0,17:17:48.15:595,48,0	0/0:21,1:22:29.02:0,29,870	0/0:23,0:23:69.23:0,69,993	0/0:7,0:7:12.04:0,12,173
chr10	90262395	.	T	TA	10061.13	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-12.557;DP=596;FS=3.181;HRun=6;HaplotypeScore=58.3515;InbreedingCoeff=0.9448;MQ=81.16;MQ0=0;MQRankSum=-1.630;QD=32.04;ReadPosRankSum=3.657;VQSLOD=5.2051;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:32:69.22:908,69,0	0/0:12,0:12:27.07:0,27,290	0/0:24,0:23:44.71:0,45,427	0/1:13,0:13:4.50:4,0,192	1/1:1,33:34:99:1278,99,0	0/0:19,0:19:54.09:0,54,561	0/0:9,0:9:18.04:0,18,193	0/0:36,0:36:96.23:0,96,1025	1/1:1,17:18:51.17:671,51,0	1/1:2,23:25:69.22:907,69,0	1/1:1,13:14:36.07:454,36,0	1/1:1,16:17:36.07:449,36,0	1/1:1,23:24:60.09:789,60,0	1/1:1,17:18:48.16:632,48,0	0/0:21,0:21:60.15:0,60,645	1/1:0,26:26:69.22:908,69,0	0/0:33,0:33:93.21:0,93,990	1/1:0,18:18:45.15:588,45,0	0/0:16,0:16:39.09:0,39,419	0/0:19,0:19:51.12:0,51,544	0/0:29,0:29:81.20:0,81,871	1/1:2,18:20:54.17:704,54,0	1/1:1,19:20:51.16:664,51,0	1/1:0,13:13:33.11:434,33,0	1/1:1,21:22:51.17:671,51,0	0/0:27,1:28:35.71:0,36,734	0/0:30,0:30:87.17:0,87,915	0/0:6,0:6:18.05:0,18,193
chr10	90262641	.	CCACACA	C	2513.03	PASS	AB=0.624;AC=22;AF=0.423;AN=52;BaseQRankSum=4.248;DP=484;FS=6.494;HRun=0;HaplotypeScore=113.4818;InbreedingCoeff=0.7307;MQ=67.71;MQ0=6;MQRankSum=-6.721;QD=16.01;ReadPosRankSum=2.591;VQSLOD=2.6552;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:12.02:0,12,240	0/0:2,0:4:5.91:0,6,130	./.	./.	1/1:12,4:17:12.01:185,12,0	0/0:11,0:18:8.81:0,9,236	0/0:14,0:16:17.93:0,18,442	0/0:27,0:27:18.06:0,18,488	1/1:5,3:8:9.03:135,9,0	0/0:13,0:18:10.03:0,10,125	0/1:6,1:14:15.57:16,0,29	1/1:6,7:16:26.89:444,27,0	1/1:6,4:11:15.05:260,15,0	1/1:6,5:11:18.06:346,18,0	0/0:13,0:14:18.06:0,18,518	1/1:5,9:15:27.09:491,27,0	0/0:24,0:26:42.13:0,42,1217	1/1:9,3:14:12.04:206,12,0	0/0:15,0:15:15.05:0,15,411	0/0:13,0:13:6.02:0,6,152	0/0:18,0:23:15.05:0,15,416	1/1:7,3:11:12.04:211,12,0	1/1:5,1:9:3.90:63,4,0	1/1:14,5:18:5.98:81,6,0	0/1:4,4:11:0.60:269,0,1	0/0:23,0:31:49.72:0,50,1262	0/0:26,0:37:39.57:0,40,853	0/0:1,0:4:3.01:0,3,78
chr10	90263133	.	A	AT	1869.20	PASS	AB=0.714;AC=22;AF=0.393;AN=56;BaseQRankSum=7.415;DP=429;FS=0.000;HRun=0;HaplotypeScore=55.1939;InbreedingCoeff=0.4139;MQ=70.83;MQ0=29;MQRankSum=0.792;QD=9.84;ReadPosRankSum=5.260;VQSLOD=3.5917;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,30:39:41.22:662,41,0	0/0:4,0:4:12.04:0,12,164	0/0:48,0:20:41.69:0,42,537	0/1:24,0:7:11.75:12,0,54	1/1:2,4:6:5.77:56,6,0	0/0:16,0:16:48.07:0,48,639	0/0:21,0:19:54.10:0,54,696	0/0:15,0:15:44.97:0,45,494	0/1:2,4:6:5.59:101,0,6	0/1:6,3:7:1.55:70,0,2	0/1:6,5:9:17.42:127,0,17	0/1:1,4:5:2.79:46,0,3	1/1:2,10:11:21.76:201,22,0	1/1:5,5:9:6.18:87,6,0	0/0:9,0:8:15.01:0,15,186	0/1:2,3:5:31.94:32,0,34	0/0:33,0:30:61.34:0,61,1008	1/1:4,21:25:35.12:405,35,0	0/0:16,0:15:41.64:0,42,517	0/0:14,0:13:39.10:0,39,516	0/0:13,0:11:30.07:0,30,394	1/1:2,2:2:1.04:22,1,0	0/1:3,1:2:8.52:22,0,9	1/1:5,4:7:8.40:94,8,0	0/1:10,8:16:14.68:121,0,15	0/0:25,0:22:63.11:0,63,807	0/0:12,0:11:33.01:0,33,411	0/0:13,0:12:32.96:0,33,367
chr10	90263248	.	T	TA	404.87	PASS	AB=1.000;AC=13;AF=0.271;AN=48;BaseQRankSum=-3.755;DP=229;FS=0.897;HRun=0;HaplotypeScore=56.7904;InbreedingCoeff=0.4462;MQ=84.11;MQ0=30;MQRankSum=-0.395;QD=6.23;ReadPosRankSum=-0.704;VQSLOD=2.6646;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:29:59.25:0,59,498	1/1:3,6:8:11.91:129,12,0	0/0:25,0:18:31.85:0,32,265	0/0:14,0:6:14.51:0,15,91	0/0:14,0:13:17.66:0,18,227	0/0:1,0:1:0:0,0,0	./.	1/1:1,0:1:2.90:16,3,0	0/0:8,0:7:17.89:0,18,140	0/1:7,0:6:4.81:5,0,60	0/1:10,0:10:9.94:10,0,160	0/0:5,0:2:3.01:0,3,31	0/0:4,0:3:8.95:0,9,73	0/0:4,0:2:6.01:0,6,61	1/1:0,5:5:6.02:75,6,0	0/0:7,0:5:11.97:0,12,105	1/1:7,18:21:24.05:298,24,0	0/0:22,0:22:47:0,47,414	./.	./.	./.	0/0:2,0:2:2.99:0,3,23	0/0:1,0:1:0:0,0,0	0/0:12,0:9:15.01:0,15,142	0/0:8,0:7:15:0,15,138	0/1:6,0:3:7.91:8,0,41	0/0:1,0:1:2.68:0,3,11	1/1:2,0:1:0.47:1,0,0
chr10	90263258	.	TTTG	T	344.34	PASS	AB=0.892;AC=22;AF=0.423;AN=52;BaseQRankSum=5.086;DP=233;FS=0.000;HRun=0;HaplotypeScore=48.3746;InbreedingCoeff=0.4523;MQ=72.52;MQ0=41;MQRankSum=-0.823;QD=3.41;ReadPosRankSum=3.763;VQSLOD=1.1940;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:29:16.96:0,17,184	0/0:7,0:6:17.80:0,18,217	0/0:18,0:12:23.69:0,24,177	0/0:13,0:5:5.39:0,5,24	0/1:7,4:9:8.05:64,0,8	0/0:5,0:4:8.94:0,9,77	0/0:3,0:1:2.97:0,3,20	0/0:2,0:2:5.93:0,6,40	0/1:9,0:7:24.11:37,0,24	0/0:7,0:5:0.93:0,1,56	1/1:10,0:10:18:70,18,0	1/1:5,0:2:2.60:10,3,0	1/1:5,0:4:7.59:27,8,0	1/1:5,0:3:5.19:19,5,0	0/0:5,0:5:6.02:0,6,97	1/1:6,1:5:5.91:49,6,0	0/0:18,0:13:27.06:0,27,476	1/1:22,0:20:32.03:115,32,0	0/0:3,0:2:5.97:0,6,45	0/0:6,0:4:11.06:0,11,62	./.	1/1:2,0:2:2.50:9,2,0	0/1:2,0:2:5:5,0,11	1/1:12,0:8:10.28:38,10,0	1/1:6,0:5:8.18:42,8,0	0/1:4,1:3:14.01:33,0,14	0/0:3,0:3:8.94:0,9,75	./.
chr10	90263259	.	TTG	T	1818.28	PASS	AB=0.904;AC=25;AF=0.481;AN=52;BaseQRankSum=4.883;DP=233;FS=0.000;HRun=0;HaplotypeScore=39.5243;InbreedingCoeff=0.4482;MQ=72.15;MQ0=44;MQRankSum=1.495;QD=12.72;ReadPosRankSum=5.364;VQSLOD=3.1092;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:29:66.55:120,0,67	0/0:8,0:7:20.79:0,21,198	0/0:15,0:11:17.24:0,17,122	0/0:13,0:5:5.48:0,5,42	1/1:7,4:9:14.80:173,15,0	0/0:5,0:4:8.90:0,9,60	0/0:3,0:1:2.97:0,3,20	0/0:4,0:3:8.93:0,9,65	0/1:7,2:7:14.54:167,0,15	0/1:4,3:5:43.52:44,0,75	1/1:2,8:10:26.67:318,27,0	1/1:4,1:2:3.01:39,3,0	1/1:3,2:4:9.03:114,9,0	1/1:2,3:3:6.02:78,6,0	0/0:3,0:3:5.97:0,6,62	1/1:5,2:5:14.66:144,15,0	0/0:19,0:13:27.06:0,27,367	1/1:4,17:19:39.12:493,39,0	0/0:3,0:2:5.97:0,6,45	0/0:6,0:4:11.06:0,11,62	./.	1/1:1,1:2:3.01:38,3,0	0/1:2,0:2:5.03:5,0,11	1/1:5,7:8:12.04:154,12,0	1/1:2,4:5:9.02:106,9,0	0/1:5,0:3:8.01:8,0,31	0/0:3,0:3:8.89:0,9,59	./.
chr10	90263260	.	TG	T	1278.80	PASS	AB=0.955;AC=27;AF=0.519;AN=52;BaseQRankSum=7.076;DP=231;FS=2.503;HRun=2;HaplotypeScore=38.5306;InbreedingCoeff=0.4889;MQ=66.36;MQ0=45;MQRankSum=2.991;QD=8.30;ReadPosRankSum=4.629;VQSLOD=1.3734;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:27,11:31:6.33:480,0,6	0/0:8,0:7:20.78:0,21,163	0/0:14,0:10:2.88:0,3,36	0/1:9,0:3:0:0,0,0	1/1:10,0:8:14.58:85,15,0	0/0:6,0:5:11.89:0,12,84	0/0:4,0:2:2.97:0,3,20	0/0:5,0:3:8.93:0,9,65	1/1:8,1:7:0.66:87,1,0	0/1:7,0:5:23.40:23,0,53	1/1:9,1:10:26.51:181,27,0	1/1:5,0:2:2.94:18,3,0	1/1:3,2:4:8.83:54,9,0	1/1:5,0:3:5.88:36,6,0	0/0:3,0:3:6.01:0,6,58	1/1:6,1:5:14.79:111,15,0	0/0:18,0:12:27.03:0,27,269	1/1:20,1:19:37.92:226,38,0	0/0:3,0:2:5.97:0,6,45	0/0:6,0:4:11.06:0,11,62	./.	1/1:2,0:2:2.92:17,3,0	0/1:2,0:2:5.05:5,0,11	1/1:10,1:8:11.77:72,12,0	1/1:5,0:5:8.72:50,9,0	0/1:5,0:3:2.38:2,0,31	0/0:3,0:3:8.89:0,9,59	./.
chr10	90264255	.	TTG	T	6401.32	PASS	AB=0.576;AC=27;AF=0.482;AN=56;BaseQRankSum=9.894;DP=562;FS=5.169;HRun=0;HaplotypeScore=72.4730;InbreedingCoeff=0.9218;MQ=63.10;MQ0=3;MQRankSum=3.064;QD=26.13;ReadPosRankSum=4.921;VQSLOD=5.3186;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:35:84.26:1034,84,0	0/0:7,0:7:17.98:0,18,261	0/0:32,0:15:19.70:0,20,219	0/0:29,0:12:9:0,9,96	1/1:4,14:18:33.06:389,33,0	0/0:24,0:23:60.14:0,60,892	0/0:24,0:24:56.78:0,57,878	0/0:34,1:35:26.25:0,26,845	1/1:3,17:20:45.14:554,45,0	1/1:3,23:26:66.21:809,66,0	1/1:2,15:17:39.02:480,39,0	1/1:2,7:9:21.07:258,21,0	1/1:2,8:10:18.06:221,18,0	1/1:0,16:16:48.15:591,48,0	0/0:19,0:19:42.13:0,42,647	1/1:1,10:11:18.06:222,18,0	0/0:32,1:33:81.22:0,81,1249	1/1:4,16:20:31.67:403,32,0	0/0:17,0:17:29.69:0,30,447	0/0:13,0:13:33.08:0,33,487	0/0:15,0:15:36.12:0,36,587	1/1:0,9:9:21.02:241,21,0	0/1:5,13:19:8.26:313,0,8	1/1:1,18:19:42.13:517,42,0	1/1:2,14:16:30.09:369,30,0	0/0:36,2:38:25.42:0,25,1408	0/0:25,0:25:53.90:0,54,813	0/0:5,0:5:15.05:0,15,245
chr10	90264463	.	G	GT	2686.98	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-6.981;DP=294;FS=40.550;HRun=0;HaplotypeScore=39.4116;InbreedingCoeff=0.7089;MQ=66.58;MQ0=5;MQRankSum=1.434;QD=23.57;ReadPosRankSum=6.520;VQSLOD=1.4347;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:35.97:0,36,374	0/0:4,0:4:5.86:0,6,37	0/0:15,0:7:18.03:0,18,193	0/0:15,0:8:7.23:0,7,79	0/0:9,0:9:8.71:0,9,81	1/1:2,3:5:12.02:146,12,0	1/1:3,9:12:13.10:270,13,0	1/1:1,14:15:42.03:498,42,0	0/0:11,0:11:13.48:0,13,99	0/0:5,0:4:3:0,3,27	0/0:5,0:5:3.46:0,3,24	0/0:4,0:4:3.07:0,3,11	0/1:8,0:8:3.71:4,0,18	0/0:10,0:10:8.87:0,9,56	0/0:8,0:8:15.77:0,16,112	0/0:15,0:15:1.14:0,1,34	0/0:21,0:21:18.36:0,18,147	0/0:11,0:11:8.96:0,9,105	1/1:2,7:10:18.50:212,18,0	1/1:0,7:7:12.03:163,12,0	1/1:2,22:24:48.16:645,48,0	0/0:5,0:5:8.90:0,9,64	0/0:3,0:3:0:0,0,0	0/0:14,0:13:12.45:0,12,123	0/0:8,0:8:6.33:0,6,46	1/1:4,9:13:36.08:466,36,0	1/1:1,14:17:26.76:352,27,0	1/1:0,3:3:9.03:121,9,0
chr10	90264543	.	G	GAAA	8116.15	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=2.754;DP=435;FS=3.933;HRun=10;HaplotypeScore=79.0083;InbreedingCoeff=0.9472;MQ=61.21;MQ0=5;MQRankSum=-2.222;QD=21.59;ReadPosRankSum=-0.457;VQSLOD=3.2345;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:41:95.45:727,95,0	0/0:12,0:12:30.08:0,30,365	0/0:10,0:7:14.76:0,15,158	0/0:6,0:4:8.92:0,9,97	1/1:4,0:18:35.63:251,36,0	1/1:4,13:18:42.13:772,42,0	1/1:4,12:17:27.09:500,27,0	1/1:8,9:16:39.07:601,39,0	1/1:3,0:15:32.87:252,33,0	1/1:4,1:21:44.88:401,45,0	1/1:5,0:18:32.78:239,33,0	1/1:0,0:15:35.80:270,36,0	1/1:1,0:8:8.97:69,9,0	1/1:3,0:18:29.91:261,30,0	0/0:16,0:16:42.10:0,42,508	1/1:1,0:16:44.83:344,45,0	0/0:15,0:15:33.07:0,33,401	1/1:1,1:13:32.87:283,33,0	1/1:8,9:15:30.05:490,30,0	1/1:7,2:8:9.03:136,9,0	1/1:10,6:15:23.94:348,24,0	1/1:0,0:6:17.93:137,18,0	1/1:5,0:18:23.91:182,24,0	1/1:3,0:12:26.90:206,27,0	1/1:1,0:14:23.92:185,24,0	1/1:9,13:27:48.02:633,48,0	1/1:4,10:14:30.10:577,30,0	1/1:0,4:5:15.03:254,15,0
chr10	90265699	.	A	AG	13131.35	PASS	AB=0.906;AC=29;AF=0.518;AN=56;BaseQRankSum=14.293;DP=603;FS=4.081;HRun=0;HaplotypeScore=78.1199;InbreedingCoeff=0.8888;MQ=62.07;MQ0=1;MQRankSum=1.447;QD=37.52;ReadPosRankSum=4.009;VQSLOD=5.1084;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:54.18:862,54,0	0/0:9,0:9:27.06:0,27,354	0/0:4,0:4:2.17:0,2,63	0/0:8,0:4:6.85:0,7,55	1/1:0,24:25:64.39:979,64,0	0/0:21,0:21:54.15:0,54,734	0/0:23,0:23:66.20:0,66,904	0/0:36,0:35:96.30:0,96,1310	1/1:0,22:22:63.21:1006,63,0	1/1:0,29:30:90.28:1380,90,0	1/1:0,18:18:45.15:718,45,0	1/1:2,24:26:60.07:934,60,0	1/1:0,23:23:60.20:957,60,0	1/1:0,18:17:45.15:718,45,0	0/0:26,0:26:78.25:0,78,1074	1/1:0,16:15:42.14:671,42,0	0/0:22,0:22:66.19:0,66,903	1/1:0,20:20:57.02:848,57,0	0/0:28,0:28:81.26:0,81,1115	0/0:22,0:22:66.15:0,66,898	0/0:23,0:23:69.20:0,69,944	1/1:0,23:23:60.10:912,60,0	1/1:0,26:26:65.89:1053,66,0	1/1:0,26:26:75.26:1198,75,0	1/1:0,20:20:54.18:863,54,0	0/1:26,3:29:32.63:33,0,1003	0/0:22,0:22:66.21:0,66,905	0/0:9,0:9:27.09:0,27,377
chr10	90266349	.	G	GCCTTAGTGCCTCATCATGACC	72560.71	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=0.674;DP=559;FS=9.713;HRun=0;HaplotypeScore=265.3465;InbreedingCoeff=0.9592;MQ=67.67;MQ0=2;MQRankSum=-13.715;QD=167.96;ReadPosRankSum=4.431;VQSLOD=3.3318;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,14:45:93.32:8090,93,0	0/0:12,0:12:27.09:0,27,1460	0/0:32,0:31:84.29:0,84,3629	0/0:30,0:29:69.23:0,69,2903	1/1:6,1:8:6.02:489,6,0	1/1:12,4:19:45.15:3560,45,0	1/1:24,1:30:66.23:5770,66,0	1/1:40,0:40:99:5343,105,0	1/1:13,3:17:39.13:3172,39,0	1/1:7,3:15:36.09:2336,36,0	1/1:6,2:10:18.06:1515,18,0	1/1:14,4:22:51.17:3928,51,0	1/1:15,6:26:61.15:4504,61,0	1/1:19,2:22:57.20:4160,57,0	0/0:16,0:16:16.91:0,17,1838	1/1:8,7:16:45.15:3883,45,0	0/0:37,0:37:99:0,102,4677	1/1:10,3:14:30.06:2421,30,0	1/1:17,2:21:48.16:3139,48,0	1/1:12,1:14:21.07:1946,21,0	1/1:22,2:27:51.14:4239,51,0	1/1:5,1:6:15.05:1307,15,0	1/1:10,3:14:24.08:1885,24,0	1/1:12,6:23:30.06:2405,30,0	1/1:5,2:8:15.05:1167,15,0	1/1:10,7:18:51.18:4255,51,0	1/1:5,1:7:18.06:1562,18,0	1/1:3,3:7:18.06:1485,18,0
chr10	90266823	.	TA	T	7875.36	PASS	AC=36;AF=0.900;AN=40;BaseQRankSum=-4.338;DP=366;FS=11.211;HRun=8;HaplotypeScore=63.2863;InbreedingCoeff=0.9071;MQ=88.82;MQ0=0;MQRankSum=-7.755;QD=24.01;ReadPosRankSum=5.852;VQSLOD=4.6345;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:69.11:666,69,0	1/1:1,8:9:21.03:203,21,0	0/0:19,0:19:44.73:0,45,463	0/0:19,0:19:32.22:0,32,429	1/1:3,19:22:39.05:375,39,0	./.	./.	./.	1/1:2,18:20:48.07:464,48,0	1/1:1,19:20:57.09:550,57,0	1/1:1,32:33:78.11:752,78,0	1/1:0,11:11:30.05:290,30,0	1/1:3,18:21:51.07:491,51,0	1/1:2,22:24:63.10:608,63,0	1/1:0,21:21:63.10:608,63,0	1/1:1,7:8:18.03:174,18,0	1/1:1,26:27:69.11:666,69,0	1/1:3,12:15:33.05:319,33,0	./.	./.	./.	1/1:0,11:11:30.05:289,30,0	1/1:1,17:18:42.06:405,42,0	1/1:3,26:29:72.11:695,72,0	1/1:2,12:14:30.04:290,30,0	1/1:0,1:1:3:29,3,0	./.	./.
chr10	90266996	.	T	TA	8648.54	PASS	AC=36;AF=0.900;AN=40;BaseQRankSum=-3.847;DP=319;FS=1.532;HRun=7;HaplotypeScore=59.2408;InbreedingCoeff=0.8201;MQ=71.53;MQ0=0;MQRankSum=-4.418;QD=28.08;ReadPosRankSum=3.664;VQSLOD=5.5284;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:22:42.13:501,42,0	1/1:1,4:5:12.04:143,12,0	0/0:7,0:7:10.75:0,11,74	0/0:4,0:4:6.61:0,7,23	1/1:3,18:21:54.10:624,54,0	./.	./.	./.	1/1:3,11:14:27.08:322,27,0	1/1:6,18:24:57.61:654,58,0	1/1:2,24:27:72.19:840,72,0	1/1:1,11:12:30.09:358,30,0	1/1:1,27:28:72.22:859,72,0	1/1:0,21:21:57.17:679,57,0	1/1:0,16:16:39.12:466,39,0	1/1:0,11:11:27.08:322,27,0	1/1:0,15:15:39.12:465,39,0	1/1:2,11:13:21.06:250,21,0	./.	./.	./.	1/1:1,22:23:56.96:626,57,0	1/1:2,22:24:50.69:608,51,0	1/1:2,21:23:54.17:644,54,0	1/1:0,8:8:21.06:251,21,0	1/1:0,1:1:3.01:36,3,0	./.	./.
chr10	90267267	.	GA	G	6690.04	PASS	AC=28;AF=0.700;AN=40;BaseQRankSum=8.143;DP=382;FS=0.000;HRun=8;HaplotypeScore=54.7101;InbreedingCoeff=0.9596;MQ=65.67;MQ0=0;MQRankSum=2.420;QD=25.53;ReadPosRankSum=2.304;VQSLOD=5.5014;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,1193	0/0:13,0:13:36.11:0,36,435	0/0:17,0:16:20.57:0,21,429	0/0:15,0:15:36.10:0,36,418	1/1:1,23:24:66.10:637,66,0	./.	./.	./.	1/1:3,17:20:48.07:464,48,0	1/1:1,33:34:99:956,99,0	1/1:2,19:21:57.09:550,57,0	1/1:2,13:15:36.06:348,36,0	1/1:0,19:19:57.09:551,57,0	1/1:2,14:16:39.06:377,39,0	0/0:24,0:24:66.19:0,66,788	1/1:1,15:16:45.07:434,45,0	0/0:13,0:13:36.09:0,36,422	1/1:0,18:18:51.08:492,51,0	./.	./.	./.	1/1:0,12:12:33.05:317,33,0	1/1:4,19:23:57.09:550,57,0	1/1:4,25:29:69.11:666,69,0	1/1:3,11:14:33.05:319,33,0	1/1:0,1:1:3:29,3,0	./.	./.
chr10	90268185	.	GCCCTGGGTTCGGTC	G	11267.02	PASS	AC=26;AF=0.765;AN=34;BaseQRankSum=9.742;DP=283;FS=1.947;HRun=0;HaplotypeScore=184.3973;InbreedingCoeff=0.9441;MQ=42.98;MQ0=16;MQRankSum=-9.859;QD=66.67;ReadPosRankSum=-0.830;VQSLOD=4.7145;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:57.20:0,57,3641	0/0:12,0:11:33.11:0,33,2018	./.	./.	1/1:8,10:18:24.08:1008,24,0	./.	./.	./.	1/1:6,6:12:24.08:975,24,0	1/1:14,7:20:24.01:911,24,0	1/1:3,5:8:15.05:632,15,0	1/1:1,11:12:27.09:1141,27,0	1/1:5,5:10:18.06:724,18,0	1/1:3,9:12:21.07:887,21,0	0/0:22,0:21:57.18:0,57,3696	1/1:3,13:16:36.12:1521,36,0	0/0:37,0:36:93.32:0,93,6366	1/1:11,7:18:27.07:939,27,0	./.	./.	./.	1/1:4,10:14:30.10:1268,30,0	1/1:5,3:8:9.03:380,9,0	1/1:8,3:10:9.03:374,9,0	1/1:4,5:9:12.04:507,12,0	./.	./.	./.
chr10	90268211	.	GA	G	1391.61	PASS	AB=0.757;AC=29;AF=0.763;AN=38;BaseQRankSum=0.670;DP=285;FS=4.053;HRun=16;HaplotypeScore=132.8830;InbreedingCoeff=-0.1622;MQ=51.68;MQ0=5;MQRankSum=0.003;QD=5.06;ReadPosRankSum=3.076;VQSLOD=2.2248;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,11:28:1.61:94,0,2	1/1:5,1:6:4.33:23,4,0	0/1:4,0:2:4.22:12,0,4	0/0:5,0:2:0.47:0,0,1	0/1:11,3:17:7.66:52,0,8	./.	./.	./.	1/1:4,7:11:16.70:106,17,0	0/1:11,8:19:42.90:98,0,43	0/1:7,2:10:8.04:31,0,8	1/1:10,5:17:21.27:119,21,0	1/1:5,5:10:13.60:88,14,0	1/1:8,3:12:10.62:59,11,0	0/1:8,9:18:12.46:122,0,12	1/1:11,8:19:6.66:123,7,0	1/1:19,21:42:19.89:298,20,0	1/1:7,5:13:12.70:76,13,0	./.	./.	./.	1/1:12,4:20:1.75:86,2,0	1/1:5,0:5:2.76:17,3,0	1/1:6,4:10:11.55:72,12,0	0/1:6,2:9:17.05:26,0,17	./.	./.	./.
chr10	90270144	.	G	GA	7458.72	PASS	AC=38;AF=0.905;AN=42;BaseQRankSum=-3.415;DP=227;FS=0.000;HRun=1;HaplotypeScore=88.3691;InbreedingCoeff=0.5189;MQ=51.25;MQ0=4;MQRankSum=-2.235;QD=34.85;ReadPosRankSum=2.388;VQSLOD=4.8174;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:45.15:718,45,0	1/1:0,6:5:12.04:191,12,0	0/0:4,0:4:6:0,6,65	0/0:4,0:2:0.89:0,1,2	1/1:3,18:21:45.15:718,45,0	./.	1/1:0,1:1:3.01:48,3,0	./.	1/1:2,12:14:30.10:478,30,0	1/1:3,12:13:36.12:567,36,0	1/1:0,11:7:9.03:143,9,0	1/1:3,9:12:24.08:383,24,0	1/1:1,17:16:48.16:765,48,0	1/1:0,12:11:27.09:431,27,0	1/1:0,10:10:27.09:431,27,0	1/1:0,8:8:21.07:335,21,0	1/1:0,13:12:33.11:527,33,0	1/1:1,11:11:30.10:480,30,0	./.	1/1:1,5:5:6.02:96,6,0	./.	1/1:0,5:3:6.02:96,6,0	1/1:1,9:8:18.06:287,18,0	1/1:1,2:2:2.39:46,2,0	1/1:1,17:17:45.15:719,45,0	./.	./.	./.
chr10	90270401	.	T	TGC	27019.41	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=7.854;DP=628;FS=4.070;HRun=0;HaplotypeScore=99.9328;InbreedingCoeff=0.9876;MQ=83.57;MQ0=0;MQRankSum=-10.630;QD=46.59;ReadPosRankSum=5.599;VQSLOD=5.9767;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:27:75.26:1425,75,0	1/1:0,6:6:15.05:288,15,0	0/0:24,0:24:60.20:0,60,910	0/0:24,0:24:63.21:0,63,943	1/1:2,18:21:57.20:1073,57,0	1/1:2,20:22:57.20:1096,57,0	1/1:1,27:28:81.28:1544,81,0	1/1:5,18:25:69.12:1210,69,0	1/1:0,29:29:75.26:1442,75,0	1/1:3,21:23:63.22:1192,63,0	1/1:0,24:23:66.23:1265,66,0	1/1:3,25:29:66.23:1260,66,0	1/1:2,18:20:54.19:1034,54,0	1/1:2,21:23:57.20:1089,57,0	1/1:1,32:35:84.29:1607,84,0	1/1:1,19:20:51.17:961,51,0	1/1:6,24:28:57.20:1100,57,0	1/1:2,15:17:45.15:856,45,0	1/1:4,8:12:33.11:614,33,0	1/1:2,19:21:48.16:896,48,0	1/1:6,25:31:62.77:1204,63,0	1/1:1,16:17:45.15:848,45,0	1/1:2,23:25:54.05:1037,54,0	1/1:2,18:21:39.13:753,39,0	1/1:2,13:15:39.13:751,39,0	1/1:6,20:26:60.21:1153,60,0	1/1:7,17:24:51.17:975,51,0	1/1:0,6:6:18.06:348,18,0
chr10	90270808	.	CT	C	5054.05	PASS	AB=0.872;AC=37;AF=0.661;AN=56;BaseQRankSum=-1.412;DP=515;FS=11.734;HRun=12;HaplotypeScore=93.7717;InbreedingCoeff=0.5941;MQ=60.13;MQ0=6;MQRankSum=1.637;QD=13.48;ReadPosRankSum=5.706;VQSLOD=3.7648;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,24:38:71.43:559,71,0	1/1:2,4:6:11.93:93,12,0	0/0:16,1:9:15.82:0,16,133	0/1:17,0:13:15.11:15,0,26	1/1:13,13:26:30.49:335,30,0	0/0:18,0:18:32.47:0,32,240	0/1:17,3:20:21.25:21,0,121	0/0:35,0:35:21.92:0,22,477	0/1:9,8:17:21.71:216,0,22	1/1:3,9:12:26.88:209,27,0	1/1:10,11:21:40.85:305,41,0	1/1:6,16:22:56.75:438,57,0	1/1:6,9:16:28.88:212,29,0	1/1:1,8:9:23.91:186,24,0	1/1:8,12:21:46.35:351,46,0	1/1:8,10:18:38.82:297,39,0	1/1:15,19:33:71.45:539,71,0	1/1:5,11:17:36.74:282,37,0	0/0:30,1:31:15.71:0,16,449	0/0:17,0:17:9.58:0,10,208	0/0:9,0:9:11.91:0,12,103	1/1:5,10:15:5.25:216,5,0	1/1:6,12:18:38.81:299,39,0	1/1:3,13:15:29.86:232,30,0	1/1:2,9:11:29.87:232,30,0	0/0:13,0:13:14.98:0,15,130	0/1:11,1:12:4.37:4,0,112	0/1:7,1:8:10.28:10,0,66
chr10	90270828	.	CT	C	5122.32	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=-3.017;DP=524;FS=1.235;HRun=9;HaplotypeScore=93.0639;InbreedingCoeff=0.4891;MQ=52.15;MQ0=14;MQRankSum=-0.050;QD=11.26;ReadPosRankSum=3.467;VQSLOD=4.2843;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,31:36:60.01:549,60,0	1/1:3,4:6:6:55,6,0	0/0:39,0:10:7.62:0,8,150	0/0:30,0:6:3.01:0,3,34	1/1:9,13:21:26.90:234,27,0	1/1:14,0:14:10.19:30,10,0	0/1:25,0:25:1.63:17,0,2	1/1:21,0:21:1:20,1,0	1/1:3,16:19:35.98:319,36,0	1/1:3,14:15:33:302,33,0	1/1:5,12:17:23.98:215,24,0	1/1:7,15:23:41.99:382,42,0	1/1:5,14:19:24:216,24,0	1/1:4,10:14:24:219,24,0	1/1:4,18:22:41.99:384,42,0	1/1:6,11:17:20.99:192,21,0	1/1:11,24:35:57:520,57,0	1/1:7,12:19:38.92:357,39,0	1/1:10,0:10:12.46:35,12,0	1/1:16,0:16:12.21:35,12,0	1/1:6,0:7:6.78:19,7,0	1/1:6,8:14:17.97:165,18,0	1/1:7,10:17:23.98:214,24,0	1/1:2,12:13:33:297,33,0	1/1:3,12:15:33.02:302,33,0	0/1:11,0:11:3.03:3,0,9	1/1:13,0:13:9.20:27,9,0	1/1:8,0:7:5.63:16,6,0
chr10	90270829	.	TTTTTTTTTCG	T	5044.67	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-4.292;DP=513;FS=38.180;HRun=0;HaplotypeScore=158.8596;InbreedingCoeff=0.9642;MQ=52.39;MQ0=14;MQRankSum=-3.188;QD=45.86;ReadPosRankSum=0.592;VQSLOD=2.5589;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:36:87.29:0,87,2775	0/0:7,0:6:15.05:0,15,430	0/0:39,0:10:29.52:0,30,592	0/0:30,0:5:6.49:0,6,185	0/0:23,0:22:54.18:0,54,1550	1/1:0,13:13:15.05:497,15,0	1/1:1,22:23:20.70:619,21,0	1/1:1,17:18:45.04:994,45,0	0/0:19,0:19:48.16:0,48,1501	0/0:17,0:15:42.14:0,42,1219	0/0:18,0:18:45.14:0,45,1215	0/0:24,0:24:72.22:0,72,2106	0/0:20,0:20:36.10:0,36,1056	0/0:14,0:14:36.06:0,36,839	0/0:23,0:23:63.21:0,63,1912	0/0:16,0:16:42.14:0,42,1225	0/0:35,0:35:81.27:0,81,2490	0/0:19,0:19:54.16:0,54,1634	1/1:0,9:9:27.05:688,27,0	1/1:0,15:15:26.96:663,27,0	1/1:4,1:5:12.04:276,12,0	0/0:14,0:14:36.12:0,36,1155	0/0:17,0:17:39.13:0,39,1105	0/0:14,0:13:36.12:0,36,1343	0/0:15,0:15:42.12:0,42,1126	1/1:0,10:10:29.98:500,30,0	1/1:1,10:11:20.92:515,21,0	1/1:1,5:5:9.03:293,9,0
chr10	90271071	.	TCTTC	T	156.67	PASS	AB=0.987;AC=10;AF=0.185;AN=54;BaseQRankSum=5.301;DP=452;FS=6.444;HRun=0;HaplotypeScore=109.3043;InbreedingCoeff=0.0427;MQ=35.06;MQ0=18;MQRankSum=-4.038;QD=1.32;ReadPosRankSum=1.172;VQSLOD=1.5331;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:11:5.19:5,0,589	0/0:2,0:2:6.02:0,6,149	0/0:54,0:5:13.29:0,13,265	0/0:55,0:11:30.09:0,30,641	0/0:29,0:28:8.54:0,9,712	0/1:16,0:14:9.19:9,0,245	0/1:15,0:14:13.42:13,0,435	0/0:15,0:14:4.55:0,5,436	0/0:8,0:7:20.82:0,21,416	0/0:23,1:18:25.31:0,25,910	0/0:19,1:13:3.90:0,4,686	0/1:17,0:16:35.34:35,0,770	0/0:5,0:4:9.03:0,9,216	0/1:15,2:15:60.91:61,0,493	1/1:8,0:8:16.27:150,16,0	0/0:6,0:6:12.04:0,12,283	0/0:4,0:4:9.03:0,9,224	./.	0/0:14,0:13:35.79:0,36,626	0/0:27,0:25:23.11:0,23,433	0/0:11,0:10:6.63:0,7,320	0/0:18,0:16:9.92:0,10,607	0/1:15,0:12:0.64:1,0,430	0/0:6,0:4:3.01:0,3,75	0/0:10,0:8:15.05:0,15,366	0/0:25,0:24:19.27:0,19,1051	0/1:14,0:13:3.73:4,0,541	0/1:4,0:3:2.79:7,0,3
chr10	90271073	.	TTC	T	756.30	PASS	AB=0.872;AC=16;AF=0.296;AN=54;BaseQRankSum=2.804;DP=457;FS=6.408;HRun=0;HaplotypeScore=101.9583;InbreedingCoeff=-0.1294;MQ=34.98;MQ0=19;MQRankSum=-3.082;QD=3.47;ReadPosRankSum=-0.239;VQSLOD=1.7907;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,1:12:2.17:2,0,508	0/0:2,0:2:6.02:0,6,114	0/0:54,0:5:13.29:0,13,215	0/0:55,0:11:30.06:0,30,492	0/0:28,1:28:7.42:0,7,605	0/1:9,7:14:99:185,0,182	0/1:10,6:14:99:131,0,332	0/1:12,4:15:99:111,0,359	0/0:8,0:7:20.67:0,21,327	0/0:24,1:19:41.68:0,42,699	0/0:20,0:13:29.92:0,30,593	0/1:15,0:15:25.28:25,0,593	0/0:5,0:4:9.03:0,9,175	0/1:16,1:16:27.24:27,0,427	1/1:6,2:8:17.51:108,18,0	0/0:6,0:6:12.04:0,12,236	0/0:4,0:4:9.03:0,9,160	./.	0/0:14,0:13:34.72:0,35,463	0/1:24,2:25:42.94:43,0,363	0/1:10,2:11:26.92:27,0,271	0/1:15,3:16:5.22:5,0,449	0/1:15,0:12:1.45:1,0,406	0/0:7,0:5:3.01:0,3,58	0/0:10,0:8:15.05:0,15,288	0/1:21,3:23:86.16:86,0,730	0/1:11,3:13:99:108,0,393	1/1:3,1:3:0.66:45,1,0
chr10	90271083	.	TTCTCTC	T	479.75	PASS	AB=0.991;AC=18;AF=0.375;AN=48;BaseQRankSum=-1.280;DP=475;FS=2.448;HRun=0;HaplotypeScore=129.6521;InbreedingCoeff=0.2243;MQ=34.55;MQ0=24;MQRankSum=3.706;QD=2.98;ReadPosRankSum=3.271;VQSLOD=2.2087;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:13:15.54:16,0,79	1/1:2,0:2:4.57:64,5,0	./.	./.	1/1:26,3:29:5.08:120,5,0	0/0:18,0:17:12:0,12,254	0/0:18,0:14:10.25:0,10,304	0/0:19,0:16:1.25:0,1,3	1/1:8,1:8:5.81:72,6,0	0/0:23,0:18:30.03:0,30,381	0/0:20,1:14:6.02:0,6,80	0/1:16,0:15:2.53:3,0,81	1/1:5,0:4:5.97:46,6,0	0/1:20,0:18:45.43:54,0,45	0/0:8,0:8:0.47:0,0,2	0/0:8,0:7:2.49:0,2,9	1/1:5,0:5:3.01:40,3,0	./.	0/0:11,0:11:9.03:0,9,206	0/0:27,0:25:3.01:0,3,94	0/0:12,0:10:12.04:0,12,319	0/1:21,0:18:44.72:107,0,45	0/1:16,0:14:10.05:14,0,10	1/1:9,0:6:2.40:19,2,0	0/1:12,0:10:12.30:72,0,12	0/0:24,0:22:35.43:0,35,652	0/0:16,0:15:16.30:0,16,309	./.
chr10	90271408	.	T	TG	13958	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-1.374;DP=620;FS=1.002;HRun=1;HaplotypeScore=79.0079;InbreedingCoeff=0.9963;MQ=53.45;MQ0=0;MQRankSum=-7.782;QD=38.66;ReadPosRankSum=5.627;VQSLOD=5.1569;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:57.19:0,57,794	1/1:0,9:9:24.08:381,24,0	0/0:13,0:13:39.10:0,39,519	0/0:8,0:8:14.07:0,14,127	1/1:1,24:25:42.14:669,42,0	0/0:21,0:21:54.18:0,54,755	0/0:26,0:26:72.21:0,72,971	0/0:38,0:38:99:0,114,1578	1/1:1,21:22:51.17:812,51,0	1/1:2,28:30:90.26:1388,90,0	1/1:0,26:25:63.21:1004,63,0	1/1:1,27:28:63.21:1002,63,0	1/1:1,14:15:36.12:574,36,0	1/1:0,21:21:51.17:813,51,0	1/1:0,35:35:84.29:1341,84,0	1/1:1,40:41:99:1721,108,0	1/1:1,29:30:84.29:1342,84,0	1/1:1,9:10:24.08:383,24,0	0/0:31,0:31:84.28:0,84,1173	0/0:17,0:17:48.16:0,48,670	0/0:29,0:29:84.24:0,84,1134	1/1:1,14:15:36.12:574,36,0	1/1:2,22:24:54.18:854,54,0	1/1:0,13:13:30.10:479,30,0	1/1:1,15:16:39.13:622,39,0	0/0:24,1:25:27.27:0,27,959	0/0:19,0:19:48.16:0,48,670	0/0:9,0:9:27.09:0,27,377
chr10	90271747	.	TC	T	6628.14	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=7.126;DP=487;FS=0.000;HRun=1;HaplotypeScore=54.8452;InbreedingCoeff=0.9963;MQ=59.83;MQ0=1;MQRankSum=0.134;QD=38.99;ReadPosRankSum=-1.060;VQSLOD=4.7242;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.29:0,84,1339	0/0:11,0:11:30.10:0,30,470	0/0:22,0:14:38.24:0,38,577	0/0:24,0:22:52.82:0,53,852	0/0:23,0:23:69.22:0,69,1071	1/1:0,17:17:42.14:587,42,0	1/1:0,21:21:57.19:797,57,0	1/1:0,19:18:54.18:755,54,0	0/0:17,0:16:48.16:0,48,767	0/0:13,0:13:39.13:0,39,623	0/0:7,0:7:21.06:0,21,312	0/0:10,0:10:30.10:0,30,480	0/0:6,0:6:18.06:0,18,288	0/0:12,0:12:36.12:0,36,574	0/0:21,0:21:63.21:0,63,1006	0/0:15,0:15:45.15:0,45,719	0/0:22,0:22:63.20:0,63,983	0/0:19,0:18:57.19:0,57,910	1/1:1,20:19:57.19:797,57,0	1/1:0,13:13:39.13:545,39,0	1/1:0,44:44:99:1762,126,0	0/0:9,0:9:27.09:0,27,429	0/0:10,0:10:30.09:0,30,456	0/0:33,0:33:93.29:0,93,1461	0/0:15,0:15:45.15:0,45,718	1/1:0,12:12:33.11:462,33,0	1/1:0,17:17:48.16:671,48,0	1/1:0,6:6:18.06:252,18,0
chr10	90271924	.	TC	T	5247.96	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.234;DP=458;FS=19.090;HRun=10;HaplotypeScore=70.6851;InbreedingCoeff=0.7079;MQ=66.53;MQ0=0;MQRankSum=-0.881;QD=12.20;ReadPosRankSum=4.346;VQSLOD=2.7197;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,17:21:26.98:234,27,0	1/1:2,1:3:6:52,6,0	0/0:12,0:11:7.68:0,8,113	0/0:16,0:16:2.85:0,3,180	1/1:2,5:7:14.99:129,15,0	1/1:5,0:14:18.32:54,18,0	1/1:3,0:20:29.40:86,29,0	1/1:4,0:18:21.77:64,22,0	1/1:4,16:20:49.78:421,50,0	1/1:3,5:8:14.99:130,15,0	1/1:2,7:9:17.93:149,18,0	1/1:3,10:13:26.98:234,27,0	1/1:5,11:16:29.97:260,30,0	1/1:5,12:17:29.96:260,30,0	1/1:8,20:28:22.94:342,23,0	1/1:3,20:22:50.99:442,51,0	1/1:9,17:26:44.10:503,44,0	1/1:3,9:12:26.97:234,27,0	1/1:1,0:5:8.15:24,8,0	1/1:2,0:12:18.33:54,18,0	1/1:9,0:40:50.91:150,51,0	1/1:4,8:12:20.96:182,21,0	1/1:3,5:8:11.01:84,11,0	1/1:12,39:51:98.91:859,99,0	1/1:0,5:6:14.03:110,14,0	1/1:5,0:12:16.85:52,17,0	1/1:2,0:16:32.59:96,33,0	1/1:1,0:10:14.26:42,14,0
chr10	90272101	.	A	AAAAC	12543.14	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-10.858;DP=530;FS=0.899;HRun=0;HaplotypeScore=76.0801;InbreedingCoeff=0.9696;MQ=64.73;MQ0=2;MQRankSum=0.441;QD=37.22;ReadPosRankSum=3.114;VQSLOD=4.7101;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,16:25:48.16:1108,48,0	1/1:4,4:9:12.04:288,12,0	0/0:12,0:9:6.01:0,6,63	0/0:18,0:15:16.45:0,16,281	1/1:9,15:25:30.03:666,30,0	0/0:15,0:15:39.11:0,39,582	0/0:16,0:17:45.13:0,45,657	0/0:33,0:33:42.09:0,42,627	1/1:14,8:22:42.06:786,42,0	1/1:12,18:34:69.13:1435,69,0	1/1:5,5:11:17.98:377,18,0	1/1:7,12:19:30.10:719,30,0	1/1:6,12:20:33.11:790,33,0	1/1:10,9:19:30.10:716,30,0	1/1:5,10:15:21.07:504,21,0	1/1:4,15:20:39.13:936,39,0	1/1:11,20:33:42.14:1008,42,0	1/1:6,8:16:24.07:531,24,0	0/0:11,0:11:20.93:0,21,265	0/0:22,0:22:54.12:0,54,793	0/0:11,0:11:21.07:0,21,337	1/1:4,18:22:45.54:1025,46,0	1/1:7,10:17:21.07:504,21,0	1/1:6,8:14:21.07:504,21,0	1/1:4,11:16:27.09:648,27,0	0/0:21,0:20:36.10:0,36,534	0/0:25,0:25:48.13:0,48,705	0/0:8,0:8:12.04:0,12,193
chr10	90272596	.	C	CCT	3745.21	PASS	AB=0.706;AC=17;AF=0.304;AN=56;BaseQRankSum=7.715;DP=735;FS=67.766;HRun=0;HaplotypeScore=131.6196;InbreedingCoeff=0.9093;MQ=67.63;MQ0=28;MQRankSum=-6.161;QD=22.56;ReadPosRankSum=-0.158;VQSLOD=1.3245;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:52.72:0,53,822	0/0:11,0:11:27.09:0,27,351	0/0:74,0:30:21.75:0,22,422	0/0:103,0:42:49:0,49,895	0/0:18,0:18:45.13:0,45,565	1/1:12,9:18:21.07:329,21,0	1/1:6,11:14:18.06:278,18,0	1/1:12,10:13:27.09:449,27,0	0/0:28,0:28:57.14:0,57,720	0/0:26,0:23:45.13:0,45,570	0/0:11,0:11:21.07:0,21,272	0/0:23,0:23:39:0,39,504	0/0:29,0:29:60.09:0,60,775	0/0:23,0:23:42.13:0,42,546	0/0:25,0:24:51.15:0,51,643	0/0:32,0:32:72.20:0,72,921	0/0:32,0:32:64.07:0,64,803	0/0:17,0:17:35.85:0,36,439	1/1:7,3:9:24.08:405,24,0	1/1:6,8:14:21.06:330,21,0	1/1:12,13:21:27.09:440,27,0	0/0:12,0:12:27.09:0,27,350	0/0:11,0:11:21.07:0,21,273	0/0:45,0:45:99:0,105,1313	0/0:12,0:12:21.07:0,21,272	0/1:14,10:18:24.72:502,0,25	1/1:6,16:18:36.12:603,36,0	1/1:3,8:11:24.08:408,24,0
chr10	90272635	.	CTCTCTG	C	2390.26	PASS	AB=0.775;AC=16;AF=0.296;AN=54;BaseQRankSum=11.238;DP=775;FS=18.747;HRun=0;HaplotypeScore=154.0131;InbreedingCoeff=0.8146;MQ=47.96;MQ0=47;MQRankSum=-6.758;QD=9.80;ReadPosRankSum=-1.998;VQSLOD=1.4110;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:90.31:0,90,2418	0/0:11,0:11:30.03:0,30,728	0/0:76,0:10:11.48:0,11,81	0/1:109,0:19:0.19:0,0,182	0/0:20,0:20:54.17:0,54,1478	1/1:4,13:15:18.06:388,18,0	1/1:8,3:10:2.96:19,3,0	./.	0/0:33,0:33:72.15:0,72,2018	0/0:31,0:30:84.28:0,84,2272	0/0:18,0:18:39.12:0,39,933	0/0:25,0:25:40.83:0,41,1065	0/0:27,0:27:57.18:0,57,1717	0/0:21,0:21:39.37:0,39,1134	0/0:34,0:32:53.97:0,54,1737	0/0:35,0:35:80.24:0,80,2200	0/0:36,0:36:62.56:0,63,2043	0/0:21,0:21:48.15:0,48,1236	1/1:7,9:9:25.24:398,25,0	1/1:2,13:12:18.03:324,18,0	1/1:8,12:18:13.84:207,14,0	0/0:16,0:16:42.12:0,42,1164	0/0:19,0:18:51.08:0,51,1086	0/0:35,0:35:55.35:0,55,2244	0/0:18,0:18:48.14:0,48,1097	0/1:4,15:14:99:574,0,175	1/1:8,15:20:26.66:392,27,0	1/1:7,4:11:15.03:276,15,0
chr10	90272637	.	CTCTG	C	1213.58	PASS	AB=0.996;AC=16;AF=0.296;AN=54;BaseQRankSum=11.816;DP=769;FS=15.157;HRun=0;HaplotypeScore=136.9873;InbreedingCoeff=0.7446;MQ=48.06;MQ0=47;MQRankSum=-6.666;QD=5.12;ReadPosRankSum=-1.988;VQSLOD=1.5721;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:90.02:0,90,2110	0/0:11,0:11:30.03:0,30,638	0/0:71,0:9:0.54:0,1,85	0/1:110,0:18:40.14:40,0,112	0/0:20,0:20:54.13:0,54,1238	1/1:16,1:15:18.04:191,18,0	1/1:8,1:8:3.43:19,3,0	./.	0/0:34,0:34:72.10:0,72,1705	0/0:32,0:31:87.23:0,87,2061	0/0:19,0:19:45.11:0,45,1016	0/0:25,0:25:41.41:0,41,899	0/0:27,0:27:57.18:0,57,1414	0/0:21,0:21:39.11:0,39,986	0/0:34,0:32:54.17:0,54,1383	0/0:35,0:35:81.07:0,81,1822	0/0:37,0:37:76.12:0,76,1850	0/0:23,0:23:54.05:0,54,1172	1/1:15,0:9:25.79:228,26,0	1/1:13,2:12:18.02:177,18,0	1/1:18,2:18:14.94:149,15,0	0/0:15,0:15:42.13:0,42,1023	0/0:19,0:18:51.06:0,51,1056	0/0:36,0:36:58.34:0,58,1806	0/0:19,0:19:54.12:0,54,1107	0/1:19,0:14:99:260,0,138	1/1:20,1:18:26.49:209,26,0	1/1:9,1:10:14.61:130,15,0
chr10	90273495	.	AAGGC	A	7987.88	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.357;DP=735;FS=7.683;HRun=0;HaplotypeScore=119.5007;InbreedingCoeff=0.9998;MQ=69.43;MQ0=0;MQRankSum=-1.972;QD=34.88;ReadPosRankSum=2.975;VQSLOD=4.9140;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,3213	0/0:13,0:13:39.11:0,39,920	0/0:32,0:32:78.13:0,78,1364	0/0:31,0:30:54.56:0,55,1124	0/0:21,0:21:53.94:0,54,1174	1/1:1,15:16:30.10:550,30,0	1/1:2,36:38:47.86:814,48,0	1/1:1,19:20:57.03:681,57,0	0/0:31,0:31:84.18:0,84,1805	0/0:37,0:37:99:0,99,2146	0/0:11,0:11:30.02:0,30,694	0/0:23,0:23:63.20:0,63,1576	0/0:20,0:20:60.15:0,60,1402	0/0:29,0:29:87.21:0,87,1928	0/0:35,0:35:96.29:0,96,2353	0/0:24,0:24:69.22:0,69,1720	0/0:31,0:31:78.25:0,78,1994	0/0:17,0:17:45.08:0,45,1021	1/1:0,17:17:48.08:730,48,0	1/1:0,19:19:56.87:831,57,0	1/1:1,52:53:93.21:1668,93,0	0/0:30,0:30:81.05:0,81,1852	0/0:17,0:17:45.12:0,45,1069	0/0:24,0:24:63.13:0,63,1466	0/0:32,0:32:90.29:0,90,2226	1/1:0,22:22:63.18:1066,63,0	1/1:0,31:31:56.77:1043,57,0	1/1:0,13:13:33.11:605,33,0
chr10	90273687	.	GC	G	10424.70	PASS	AB=0.921;AC=36;AF=0.643;AN=56;BaseQRankSum=12.745;DP=620;FS=7.199;HRun=8;HaplotypeScore=79.4223;InbreedingCoeff=0.8634;MQ=64.72;MQ0=0;MQRankSum=-1.032;QD=23.43;ReadPosRankSum=5.606;VQSLOD=5.0941;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:36:87.14:840,87,0	1/1:1,4:5:12.02:116,12,0	0/0:16,0:15:24.41:0,24,249	0/1:13,1:13:33.21:33,0,153	1/1:3,26:29:72.05:684,72,0	0/0:20,0:20:54.14:0,54,629	0/0:23,0:23:60.16:0,60,711	0/0:22,0:22:60.15:0,60,691	1/1:0,14:14:39.06:377,39,0	1/1:6,37:43:99:1071,111,0	1/1:0,20:20:54.09:521,54,0	1/1:1,21:22:60.09:579,60,0	1/1:2,23:25:66.06:628,66,0	1/1:1,15:16:42.07:406,42,0	1/1:1,27:28:78.12:753,78,0	1/1:1,21:22:57.09:550,57,0	1/1:1,25:26:72.11:695,72,0	1/1:3,31:34:90.09:860,90,0	0/0:16,0:17:41.99:0,42,477	0/0:27,0:27:72.22:0,72,866	0/0:19,0:19:57.16:0,57,677	1/1:3,30:33:84.08:801,84,0	1/1:3,24:27:72.11:695,72,0	1/1:1,16:17:48.08:464,48,0	1/1:0,14:14:36.06:348,36,0	0/1:17,2:19:3.80:4,0,525	0/0:21,0:21:54.14:0,54,638	0/0:10,0:10:30.05:0,30,326
chr10	90273961	.	T	TTTC	6732.57	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=-4.429;DP=538;FS=10.528;HRun=0;HaplotypeScore=105.2845;InbreedingCoeff=0.6659;MQ=68.25;MQ0=2;MQRankSum=-1.658;QD=21.58;ReadPosRankSum=2.483;VQSLOD=4.3122;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:35:76.70:0,77,482	0/0:6,0:6:17.38:0,17,103	0/0:18,0:15:15.66:0,16,211	0/0:8,0:8:12.80:0,13,119	1/1:21,0:21:47.93:631,48,0	0/0:22,0:22:2.66:0,3,92	0/0:16,0:16:0.65:0,1,53	0/0:31,0:29:23.11:0,23,231	1/1:14,1:15:42.14:675,42,0	1/1:22,0:22:53.60:616,54,0	1/1:26,1:27:51.10:744,51,0	1/1:15,0:15:24.08:376,24,0	1/1:13,0:14:26.96:403,27,0	1/1:18,0:18:30.10:464,30,0	0/0:26,0:26:60.04:0,60,392	1/1:17,1:18:33.11:509,33,0	0/0:29,0:29:43.13:0,43,229	1/1:19,0:18:30.10:473,30,0	0/1:25,0:25:43.79:44,0,116	0/1:18,0:18:54.03:54,0,119	0/1:10,0:10:0.60:2,0,1	1/1:19,0:19:32.92:445,33,0	1/1:19,2:21:39.13:639,39,0	1/1:16,0:16:23.75:363,24,0	1/1:7,1:8:12.04:209,12,0	0/1:26,0:26:85.13:85,0,86	0/0:21,0:19:8.45:0,8,63	0/0:14,0:14:8.85:0,9,95
chr10	90273970	.	C	CT	5521.15	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-0.943;DP=533;FS=2.151;HRun=11;HaplotypeScore=100.3688;InbreedingCoeff=0.4633;MQ=66.59;MQ0=2;MQRankSum=-3.504;QD=10.54;ReadPosRankSum=3.331;VQSLOD=4.5046;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,31:38:46.36:782,46,0	1/1:1,5:6:15.03:152,15,0	0/1:17,0:14:3.18:3,0,93	0/0:8,0:9:2.05:0,2,21	1/1:4,0:25:38.63:230,39,0	1/1:21,0:21:20.68:162,21,0	1/1:16,0:16:11.49:63,11,0	1/1:24,0:22:4.65:62,5,0	1/1:1,2:17:40.33:219,40,0	1/1:1,0:25:40.17:301,40,0	1/1:2,0:23:46.08:267,46,0	1/1:2,1:14:24.50:136,25,0	1/1:0,2:15:26.06:144,26,0	1/1:2,1:23:26.59:147,27,0	1/1:6,18:25:33.71:509,34,0	1/1:2,1:19:31.48:169,31,0	1/1:2,24:26:48.10:487,48,0	1/1:0,0:18:28.87:159,29,0	1/1:23,0:23:42.02:263,42,0	1/1:19,0:19:28.44:168,28,0	1/1:7,0:7:2.84:15,3,0	1/1:0,0:15:32.10:197,32,0	1/1:2,1:22:27.48:181,27,0	1/1:1,0:17:22.96:132,23,0	1/1:1,0:7:11.36:58,11,0	1/1:23,0:24:37.93:298,38,0	1/1:23,0:21:20.46:153,20,0	1/1:14,0:14:11.18:65,11,0
chr10	90274541	.	CCAG	C	367.63	PASS	AB=0.940;AC=7;AF=0.292;AN=24;BaseQRankSum=3.442;DP=403;FS=2.450;HRun=0;HaplotypeScore=56.7937;InbreedingCoeff=0.1324;MQ=69.24;MQ0=10;MQRankSum=0.099;QD=2.52;ReadPosRankSum=1.360;VQSLOD=1.5624;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	0/0:26,0:25:3.01:0,3,48	./.	0/0:14,0:13:9.03:0,9,168	./.	./.	0/0:16,0:16:3.01:0,3,56	0/0:22,0:22:14.79:0,15,271	0/0:19,0:19:9.03:0,9,165	1/1:8,3:11:3.01:38,3,0	0/1:15,1:16:19.78:20,0,261	1/1:29,12:40:12.70:323,13,0	0/1:23,2:31:39.57:40,0,448	./.	./.	0/0:22,0:22:0:0,0,0	./.	./.	0/1:44,3:47:47.29:47,0,980	./.	./.	0/0:17,0:22:6.67:0,7,80	./.
chr10	90274741	.	G	GA	3675.50	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=12.789;DP=528;FS=4.161;HRun=10;HaplotypeScore=69.8604;InbreedingCoeff=0.8484;MQ=67.64;MQ0=4;MQRankSum=-0.976;QD=18.20;ReadPosRankSum=-2.321;VQSLOD=3.5974;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,111,907	0/0:6,0:6:14.95:0,15,119	0/0:26,0:14:2.64:0,3,73	0/1:29,0:15:10.78:11,0,123	0/0:19,0:19:41.93:0,42,345	1/1:5,17:22:20.47:423,20,0	1/1:3,13:17:14.29:341,14,0	1/1:2,26:28:57.44:801,57,0	0/0:17,0:17:32.91:0,33,270	0/0:14,0:14:29.79:0,30,246	0/0:14,0:14:28.97:0,29,223	0/0:10,0:10:2.76:0,3,173	0/0:21,0:21:44.94:0,45,369	0/0:21,0:21:53.89:0,54,440	0/0:15,0:14:32.94:0,33,268	0/0:15,0:15:38.89:0,39,318	0/0:28,0:28:74.86:0,75,611	0/0:20,0:19:44.92:0,45,369	1/1:6,13:19:30.51:397,31,0	1/1:4,5:8:12.03:128,12,0	1/1:5,14:19:9.99:298,10,0	0/0:8,0:8:17.97:0,18,147	0/0:6,0:6:11.98:0,12,98	0/0:28,0:28:70.42:0,70,582	0/0:14,0:13:38.95:0,39,320	1/1:5,17:22:29.49:511,29,0	1/1:2,16:18:39.09:413,39,0	1/1:1,18:19:33.08:352,33,0
chr10	90278121	.	C	CT	3159.14	PASS	AB=0.568;AC=17;AF=0.304;AN=56;BaseQRankSum=-1.775;DP=511;FS=3.572;HRun=10;HaplotypeScore=64.6494;InbreedingCoeff=0.8545;MQ=71.97;MQ0=4;MQRankSum=-1.056;QD=18.80;ReadPosRankSum=-2.520;VQSLOD=3.5277;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:88.93:0,89,720	0/0:4,0:4:5.98:0,6,49	0/0:13,0:13:15.12:0,15,101	0/0:10,0:7:8.55:0,9,69	0/0:14,0:14:17.94:0,18,145	0/1:5,16:21:8.20:426,0,8	1/1:6,13:20:42.77:410,43,0	1/1:6,16:23:22.58:448,23,0	0/0:15,0:16:34.97:0,35,277	0/0:23,0:23:36.24:0,36,418	0/0:9,0:9:14.98:0,15,123	0/0:17,1:18:12.95:0,13,313	0/0:20,0:20:56.90:0,57,464	0/0:17,0:17:44.93:0,45,366	0/0:21,0:22:64.94:0,65,519	0/0:13,0:13:29.96:0,30,246	0/0:33,2:38:15.07:0,15,509	0/0:20,0:19:47.87:0,48,388	1/1:7,17:23:45.10:471,45,0	1/1:3,15:18:33.08:351,33,0	1/1:4,9:13:26.90:270,27,0	0/0:20,0:20:47.91:0,48,394	0/0:17,0:17:38.78:0,39,308	0/0:20,0:20:26.15:0,26,326	0/0:15,1:16:12.99:0,13,313	1/1:8,18:27:50.93:514,51,0	1/1:1,15:15:42.08:437,42,0	1/1:3,1:4:3.01:32,3,0
chr10	90278531	.	T	TGTTTTGTTTTGTTTTG	19582.92	PASS	AB=0.973;AC=31;AF=0.554;AN=56;BaseQRankSum=-2.404;DP=602;FS=31.502;HRun=0;HaplotypeScore=263.6414;InbreedingCoeff=-0.2510;MQ=47.55;MQ0=54;MQRankSum=-4.756;QD=38.63;ReadPosRankSum=11.888;VQSLOD=1.8845;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:30:33.11:1407,33,0	1/1:1,4:12:11.96:848,12,0	0/0:41,0:11:25.31:0,25,362	0/0:29,0:8:4.89:0,5,164	0/1:26,0:25:99:126,0,405	1/1:17,0:17:9.76:1969,10,0	1/1:16,0:14:5.27:1073,5,0	0/1:29,0:23:81.80:577,0,82	0/1:15,0:13:99:129,0,260	0/1:26,0:26:99:166,0,465	0/1:18,0:15:99:194,0,139	0/1:15,0:14:99:101,0,193	0/1:11,0:10:99:107,0,210	0/1:9,0:9:95.62:123,0,96	1/1:4,9:18:14.73:1058,15,0	0/0:15,0:14:30.12:0,30,482	1/1:3,9:36:14.73:1009,15,0	0/1:30,0:29:83.40:83,0,493	0/1:25,0:20:95.68:1164,0,96	0/1:29,0:28:66.97:2332,0,67	1/1:20,0:18:24.03:1054,24,0	0/0:10,0:9:23.79:0,24,271	0/1:11,0:11:99:156,0,200	0/1:10,0:8:41.68:49,0,42	0/1:14,0:14:47.48:47,0,159	0/1:13,0:35:3.37:3046,0,3	0/1:20,0:19:14.04:2022,0,14	0/1:27,0:9:11.14:742,0,11
chr10	90278533	.	T	TG	1503.41	PASS	AB=0.734;AC=13;AF=0.232;AN=56;BaseQRankSum=3.551;DP=555;FS=0.906;HRun=0;HaplotypeScore=122.2371;InbreedingCoeff=0.3738;MQ=46.74;MQ0=58;MQRankSum=1.104;QD=7.19;ReadPosRankSum=2.302;VQSLOD=3.3609;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:0.55:0,1,15	0/0:9,0:8:3.49:0,3,8	0/0:38,0:9:18.03:0,18,125	0/0:29,0:8:3.41:0,3,36	0/0:26,0:24:52.93:0,53,343	0/1:11,6:17:82.12:99,0,82	1/1:12,5:14:4.68:116,5,0	1/1:22,8:23:29.60:330,30,0	0/0:15,0:13:34.20:0,34,223	0/0:26,0:26:77.32:0,77,559	0/0:18,0:15:41.44:0,41,278	0/0:14,0:13:29.62:0,30,205	0/0:10,0:9:23.71:0,24,161	0/0:8,0:8:20.76:0,21,141	0/0:14,0:11:7.23:0,7,22	0/0:16,0:15:38.56:0,39,275	0/0:22,0:22:7.13:0,7,34	0/0:29,0:28:73.53:0,74,506	0/1:20,5:20:25.19:189,0,25	1/1:6,24:28:21.72:339,22,0	0/1:10,10:18:56.18:93,0,56	0/0:10,0:9:23.13:0,23,152	0/0:11,0:11:28.59:0,29,175	0/0:9,0:7:14.78:0,15,96	0/0:14,0:14:35.38:0,35,232	0/1:16,7:23:20.50:173,0,21	0/1:10,10:18:31.03:226,0,31	1/1:23,4:8:17.62:106,18,0
chr10	90278537	.	T	TG	434.52	PASS	AB=0.876;AC=18;AF=0.321;AN=56;BaseQRankSum=5.842;DP=542;FS=2.931;HRun=0;HaplotypeScore=123.0938;InbreedingCoeff=0.3496;MQ=39.40;MQ0=60;MQRankSum=1.854;QD=1.46;ReadPosRankSum=0.008;VQSLOD=2.4289;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:19:1.45:31,1,0	0/0:10,0:9:6.47:0,6,25	0/1:34,0:4:0.53:1,0,19	0/0:28,0:6:7.88:0,8,41	0/0:24,0:22:50.75:0,51,317	0/1:12,6:18:9.48:9,0,27	1/1:15,5:17:9.49:73,9,0	1/1:22,8:23:14.59:164,15,0	0/0:15,0:13:34.20:0,34,223	0/0:27,0:27:80.30:0,80,580	0/0:18,0:15:41.26:0,41,264	0/0:13,0:12:26.65:0,27,180	0/0:12,0:11:26.73:0,27,190	0/0:9,0:9:23.61:0,24,162	0/1:15,0:12:1.06:1,0,1	0/0:15,0:14:35.54:0,36,249	0/1:24,0:24:6.75:7,0,7	0/0:27,0:26:67.49:0,67,457	0/1:19,5:19:18.51:75,0,19	1/1:11,15:24:7.86:93,8,0	0/1:14,5:17:17.58:18,0,23	0/0:10,0:9:20.12:0,20,125	0/0:11,0:11:28.59:0,29,176	0/0:9,0:7:11.81:0,12,76	0/0:16,0:16:44.06:0,44,297	0/1:16,7:23:26.40:26,0,54	1/1:8,10:16:2.07:73,2,0	0/1:23,4:8:4.63:26,0,5
chr10	90278541	.	T	TGTTTTGTTTTGTTTTG	22290.58	PASS	AB=0.992;AC=35;AF=0.625;AN=56;BaseQRankSum=-2.434;DP=537;FS=58.317;HRun=0;HaplotypeScore=233.7848;InbreedingCoeff=0.0666;MQ=39.59;MQ0=61;MQRankSum=-4.931;QD=49.76;ReadPosRankSum=7.163;VQSLOD=2.2434;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:42.08:1562,42,0	1/1:10,0:9:15.03:874,15,0	0/0:27,0:4:2.61:0,3,89	0/0:26,0:5:3.12:0,3,82	0/1:24,0:22:99:254,0,286	1/1:14,4:18:51.11:2044,51,0	1/1:20,1:18:22.81:1316,23,0	1/1:26,0:19:41.60:790,42,0	0/1:15,0:13:69.73:195,0,70	0/1:27,0:27:99:421,0,287	0/1:17,0:15:59.53:336,0,60	0/1:14,0:13:99:142,0,139	0/1:13,0:12:99:113,0,186	0/1:12,0:12:99:184,0,126	1/1:15,0:12:21.07:1158,21,0	0/0:15,0:14:30.21:0,30,251	1/1:26,0:26:32.74:1207,33,0	0/1:26,0:25:99:226,0,220	0/1:18,2:15:13.58:1443,0,14	1/1:24,4:26:43.26:2744,43,0	1/1:20,0:18:39.05:1376,39,0	0/0:12,0:11:13.61:0,14,94	0/1:11,0:11:99:226,0,105	0/0:9,0:7:5.32:0,5,94	0/1:16,0:16:99:171,0,162	1/1:20,3:23:61.22:2600,61,0	1/1:16,2:16:42.01:2040,42,0	1/1:23,4:8:10.54:869,11,0
chr10	90278976	.	TGTGCGAATAAATCTAAAAAA	T	16662.23	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=14.635;DP=384;FS=8.894;HRun=0;HaplotypeScore=207.7182;InbreedingCoeff=0.9664;MQ=77.29;MQ0=0;MQRankSum=-11.629;QD=122.52;ReadPosRankSum=4.692;VQSLOD=3.4404;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:24.08:1214,24,0	1/1:0,4:4:9.02:504,9,0	0/0:17,0:16:45.15:0,45,2267	0/0:9,0:6:18.06:0,18,941	0/0:13,0:13:39.10:0,39,2472	1/1:0,16:16:45.15:2585,45,0	1/1:0,7:7:21.07:1200,21,0	1/1:0,10:10:27.02:934,27,0	0/0:9,0:9:27.09:0,27,2071	0/0:21,0:21:60.21:0,60,4358	0/0:18,0:18:54.19:0,54,3932	0/0:21,0:21:60.21:0,60,3681	0/0:16,0:16:48.16:0,48,3347	0/0:13,0:13:39.13:0,39,2603	1/1:0,16:16:27.09:1558,27,0	0/0:13,0:13:33.11:0,33,2172	1/1:0,9:9:21.07:1034,21,0	0/0:28,0:28:75.26:0,75,5434	1/1:0,9:9:26.95:1067,27,0	1/1:0,12:12:33.03:1647,33,0	1/1:1,6:8:9.03:380,9,0	0/0:21,0:21:63.20:0,63,3826	0/0:15,0:15:36.11:0,36,2262	0/0:15,0:15:39.13:0,39,2830	0/0:19,0:19:48.16:0,48,3732	1/1:0,12:12:36.12:1951,36,0	1/1:0,14:14:39.13:2240,39,0	1/1:0,5:5:6.02:346,6,0
chr10	90278990	.	TA	T	1892.68	PASS	AB=0.703;AC=49;AF=0.875;AN=56;BaseQRankSum=2.616;DP=382;FS=4.858;HRun=16;HaplotypeScore=122.8160;InbreedingCoeff=0.1043;MQ=69.57;MQ0=0;MQRankSum=-1.784;QD=5.17;ReadPosRankSum=3.581;VQSLOD=2.4398;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:13.39:38,13,0	1/1:4,0:4:4.44:13,4,0	0/0:16,0:13:13.23:0,13,84	0/1:9,0:6:8.34:8,0,39	1/1:7,7:15:2.53:93,3,0	1/1:16,0:16:31.55:92,32,0	1/1:7,0:7:13.79:40,14,0	1/1:10,0:10:7.98:25,8,0	1/1:4,6:10:14.51:90,15,0	1/1:7,16:23:40.91:250,41,0	1/1:7,10:20:1.06:99,1,0	1/1:9,6:15:14.49:90,14,0	0/1:11,8:20:22.60:86,0,23	1/1:7,3:10:5.81:36,6,0	1/1:16,0:16:19.98:59,20,0	0/1:4,12:16:0.81:102,0,1	1/1:9,0:9:8.07:25,8,0	1/1:8,16:26:0.47:186,0,0	1/1:9,0:9:13.95:50,14,0	1/1:12,0:12:21.82:64,22,0	1/1:6,0:6:4.26:13,4,0	0/1:9,11:21:8.05:88,0,8	0/1:6,9:16:8.58:60,0,9	1/1:5,8:14:19.60:114,20,0	1/1:3,12:17:14.23:135,14,0	1/1:12,0:12:23.69:72,24,0	1/1:14,0:14:27.11:79,27,0	1/1:5,0:5:4.44:13,4,0
chr10	90280002	.	GC	G	5342.04	PASS	AB=0.957;AC=39;AF=0.696;AN=56;BaseQRankSum=7.102;DP=434;FS=21.736;HRun=1;HaplotypeScore=96.6788;InbreedingCoeff=-0.1011;MQ=78.65;MQ0=1;MQRankSum=-5.187;QD=12.48;ReadPosRankSum=7.166;VQSLOD=1.7910;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,25:33:77.56:568,78,0	1/1:0,9:9:26.85:196,27,0	0/1:21,6:23:99:105,0,249	0/1:14,1:13:30.33:30,0,69	0/1:7,0:7:7.25:7,0,42	1/1:7,22:29:68.37:493,68,0	1/1:3,16:19:50.69:369,51,0	1/1:13,10:23:35.96:231,36,0	0/1:7,0:7:23.35:23,0,44	0/1:7,1:8:11.48:41,0,11	0/0:2,0:2:3:0,3,25	0/1:5,0:5:15.84:16,0,42	0/1:8,0:8:5.78:6,0,87	0/1:6,1:7:36.10:67,0,36	1/1:9,11:20:38.72:281,39,0	0/1:8,0:7:35.75:36,0,36	1/1:4,18:22:47.73:350,48,0	0/1:10,1:11:51.97:63,0,52	1/1:7,11:18:34.22:242,34,0	1/1:6,18:24:53.69:394,54,0	1/1:4,20:24:56.78:432,57,0	0/1:6,0:6:10.87:49,0,11	0/1:9,0:9:22.59:23,0,23	0/1:12,0:12:9.54:10,0,178	0/0:4,0:4:4.76:0,5,25	1/1:9,19:28:60.60:439,61,0	1/1:5,25:30:77.50:564,77,0	1/1:3,14:17:41.76:306,42,0
chr10	90280313	.	GA	G	923.13	PASS	AB=0.752;AC=20;AF=0.357;AN=56;BaseQRankSum=-10.307;DP=499;FS=0.487;HRun=16;HaplotypeScore=98.9834;InbreedingCoeff=0.1532;MQ=45.95;MQ0=31;MQRankSum=6.071;QD=3.75;ReadPosRankSum=1.191;VQSLOD=1.0416;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:32:42.02:0,42,219	0/0:7,0:6:9.71:0,10,38	0/0:31,0:8:8.66:0,9,70	0/0:20,0:6:2.45:0,2,39	0/1:9,3:9:33.55:42,0,34	0/0:12,0:12:16.20:0,16,68	0/0:27,0:25:10:0,10,96	0/1:34,0:32:64.73:65,0,78	0/1:8,10:20:10.94:103,0,11	0/1:3,7:10:29.47:69,0,29	0/1:9,11:18:23.10:86,0,23	1/1:9,4:13:1.78:90,2,0	0/1:16,1:17:2.71:82,0,3	1/1:6,11:16:11.74:72,12,0	0/0:20,0:19:32.78:0,33,145	0/1:9,6:15:6.14:64,0,6	0/0:22,0:20:27.30:0,27,135	1/1:8,7:15:20.04:104,20,0	0/1:18,0:17:19.84:20,0,64	0/0:17,0:15:17.26:0,17,64	0/0:11,0:10:7.86:0,8,32	0/1:4,5:9:21.63:54,0,22	1/1:5,3:5:5.87:36,6,0	1/1:11,7:18:29.29:169,29,0	0/1:4,6:8:13.38:42,0,13	0/0:15,0:15:8.67:0,9,99	0/0:29,0:27:47.03:0,47,194	0/0:9,0:8:6.60:0,7,25
chr10	90280323	.	A	ACAAAAC	12642.69	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-9.920;DP=535;FS=3.743;HRun=0;HaplotypeScore=97.7941;InbreedingCoeff=0.9652;MQ=53.61;MQ0=21;MQRankSum=-8.751;QD=45.31;ReadPosRankSum=4.407;VQSLOD=4.8534;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,2:39:28.16:1077,28,0	1/1:2,0:6:12.51:300,13,0	0/0:37,0:12:26.87:0,27,328	0/0:25,0:9:23.81:0,24,331	0/0:16,0:13:34.17:0,34,511	1/1:1,12:16:9.02:585,9,0	1/1:1,20:24:39.13:1211,39,0	1/1:3,28:35:87:1927,87,0	0/0:19,0:19:41.68:0,42,686	0/0:16,0:16:35.85:0,36,610	0/0:21,0:19:39.74:0,40,560	0/0:16,0:15:36.32:0,36,508	0/0:15,0:14:34.95:0,35,384	0/0:14,0:14:16.41:0,16,285	1/1:3,1:22:14.58:849,15,0	0/0:12,0:12:26.91:0,27,424	1/1:3,2:24:35.58:861,36,0	0/0:14,0:13:29.71:0,30,427	1/1:2,15:18:50.45:1252,50,0	1/1:1,13:15:24.08:765,24,0	1/1:8,2:9:14.84:272,15,0	0/0:10,0:9:18.06:0,18,348	0/0:10,0:8:12.02:0,12,171	0/0:19,0:18:41.96:0,42,639	0/0:12,0:9:15.01:0,15,273	1/1:1,18:21:51.13:1460,51,0	1/1:0,25:27:53.54:1786,54,0	1/1:0,7:10:9.03:299,9,0
chr10	90280575	.	C	CG	8525.59	PASS	AB=0.952;AC=27;AF=0.482;AN=56;BaseQRankSum=-8.335;DP=490;FS=3.162;HRun=1;HaplotypeScore=48.1948;InbreedingCoeff=0.9019;MQ=57.47;MQ0=11;MQRankSum=-2.879;QD=32.29;ReadPosRankSum=-0.280;VQSLOD=4.3152;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:23:54.14:780,54,0	1/1:0,7:7:18.06:269,18,0	0/1:19,1:13:11.54:12,0,239	0/0:15,0:6:17.61:0,18,171	0/0:33,0:33:90.28:0,90,1155	1/1:2,24:26:57.19:852,57,0	1/1:5,15:19:48.08:667,48,0	1/1:1,11:11:33.11:493,33,0	0/0:17,1:18:6.18:0,6,543	0/0:13,0:13:36.12:0,36,467	0/0:17,0:17:48.16:0,48,623	0/0:14,0:14:36.12:0,36,463	0/0:10,0:9:24.08:0,24,310	0/0:9,0:9:27.09:0,27,350	1/1:0,13:13:30.10:449,30,0	0/0:17,0:15:39.11:0,39,491	1/1:0,25:25:63.17:916,63,0	0/0:16,0:16:45.15:0,45,583	1/1:6,16:16:48.16:716,48,0	1/1:1,17:18:45.15:644,45,0	1/1:5,13:16:30.10:449,30,0	0/0:2,0:2:6.02:0,6,76	0/0:9,0:9:27.07:0,27,335	0/0:27,0:27:66.21:0,66,856	0/0:25,0:24:69.22:0,69,896	1/1:2,24:26:69.22:1005,69,0	1/1:1,14:12:39.09:557,39,0	1/1:0,18:18:48.16:718,48,0
chr10	90280731	.	T	TAA	6072.14	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-8.226;DP=481;FS=5.542;HRun=10;HaplotypeScore=52.7041;InbreedingCoeff=0.9231;MQ=53.08;MQ0=25;MQRankSum=-2.320;QD=24.10;ReadPosRankSum=-1.145;VQSLOD=3.8514;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,21:26:45.15:671,45,0	1/1:0,6:6:15.05:219,15,0	0/0:6,0:5:11.90:0,12,112	0/0:7,0:5:11.38:0,11,100	0/0:28,0:23:54.10:0,54,549	1/1:7,17:24:38.62:545,39,0	1/1:4,10:11:27.09:403,27,0	1/1:18,15:16:39.07:526,39,0	0/0:16,0:16:30.03:0,30,305	0/0:27,0:28:41.65:0,42,460	0/0:21,0:21:47.89:0,48,476	0/0:12,0:12:24.03:0,24,244	0/0:15,0:14:20.91:0,21,213	0/0:16,0:15:35.96:0,36,342	1/1:0,6:6:3.01:45,3,0	0/0:14,0:12:30.07:0,30,305	1/1:7,8:14:3.14:292,3,0	0/0:18,0:16:36.06:0,36,365	1/1:6,15:20:54.17:769,54,0	1/1:10,23:35:55.51:968,56,0	1/1:0,9:9:21.07:313,21,0	0/0:6,0:6:12:0,12,122	0/0:7,0:7:15.03:0,15,153	0/0:11,0:11:18.04:0,18,183	0/0:24,0:24:48.11:0,48,488	1/1:7,18:23:51.10:713,51,0	1/1:8,16:23:9.38:341,9,0	1/1:2,7:9:18.06:268,18,0
chr10	90281301	.	GT	G	1490.18	PASS	AB=0.747;AC=20;AF=0.357;AN=56;BaseQRankSum=-11.325;DP=685;FS=3.519;HRun=16;HaplotypeScore=99.6801;InbreedingCoeff=0.4530;MQ=65.44;MQ0=14;MQRankSum=-0.982;QD=4.87;ReadPosRankSum=-0.076;VQSLOD=2.3073;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:75.23:0,75,311	0/0:6,0:6:13.39:0,13,55	0/1:44,1:10:6.74:7,0,37	0/0:31,0:12:2.39:0,2,37	0/1:16,9:26:43.53:92,0,44	0/0:43,0:41:77.67:0,78,318	0/0:23,0:23:48.21:0,48,197	0/0:36,0:36:50.89:0,51,209	1/1:6,11:17:29.29:179,29,0	0/1:16,10:25:2.77:98,0,3	1/1:3,16:18:23.58:248,24,0	0/1:14,1:17:4.43:67,0,4	1/1:10,1:12:14.83:70,15,0	0/1:11,2:14:11.49:45,0,11	0/0:23,0:23:43.09:0,43,179	0/1:3,17:20:1.56:102,0,2	0/0:33,0:33:66.96:0,67,275	0/1:9,12:21:11.71:114,0,12	0/0:22,0:21:29.69:0,30,125	0/0:42,0:42:94.77:0,95,418	0/0:11,0:11:18.75:0,19,77	1/1:11,17:29:27.53:238,28,0	1/1:13,13:27:11.76:163,12,0	0/1:12,8:20:24:99,0,24	1/1:4,8:11:25.25:159,25,0	0/0:35,2:36:37.04:0,37,241	0/0:28,0:27:52.52:0,53,214	0/0:8,0:7:16.07:0,16,66
chr10	90281307	.	T	TG	9149.28	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-15.561;DP=661;FS=0.673;HRun=0;HaplotypeScore=68.7616;InbreedingCoeff=0.9925;MQ=65.21;MQ0=15;MQRankSum=3.191;QD=26.91;ReadPosRankSum=4.526;VQSLOD=5.7099;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:80.84:962,81,0	1/1:0,6:6:17.97:195,18,0	0/0:42,0:9:13.06:0,13,135	0/0:32,0:12:18.67:0,19,158	0/0:25,0:25:65.90:0,66,594	1/1:1,38:37:87.27:1037,87,0	1/1:0,24:24:54.17:642,54,0	1/1:4,32:36:89.21:956,89,0	0/0:16,0:16:39.02:0,39,346	0/0:27,0:25:68.93:0,69,619	0/0:19,0:18:53.88:0,54,454	0/0:14,0:14:36.01:0,36,329	0/0:11,0:11:29.99:0,30,263	0/0:13,0:13:27.02:0,27,254	1/1:1,18:19:48.14:562,48,0	0/0:21,0:21:33.03:0,33,311	1/1:0,32:33:75.23:891,75,0	0/0:19,0:19:44.99:0,45,418	1/1:1,20:20:56.92:561,57,0	1/1:2,43:46:87.52:1169,88,0	1/1:0,11:11:21.06:250,21,0	0/0:28,0:28:77.83:0,78,650	0/0:25,0:25:59.71:0,60,517	0/0:18,0:18:44.98:0,45,418	0/0:11,0:10:30.02:0,30,277	1/1:3,34:36:51.67:996,52,0	1/1:2,25:27:60.18:712,60,0	1/1:1,6:6:18.06:214,18,0
chr10	90283965	.	CT	C	1060.16	PASS	AB=0.986;AC=28;AF=0.500;AN=56;BaseQRankSum=11.282;DP=336;FS=3.582;HRun=10;HaplotypeScore=51.5998;InbreedingCoeff=0.5826;MQ=74.23;MQ0=0;MQRankSum=1.015;QD=5.89;ReadPosRankSum=4.232;VQSLOD=0.6748;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:9.02:0,9,100	0/1:6,0:6:10.45:36,0,10	0/1:10,1:11:8.51:9,0,115	0/0:11,0:8:6.90:0,7,63	1/1:14,0:14:30.07:144,30,0	0/0:13,0:13:33.09:0,33,365	0/0:6,0:6:18.05:0,18,199	0/0:35,1:36:54.97:0,55,773	1/1:9,0:9:19.24:87,19,0	1/1:11,0:11:22.10:80,22,0	0/1:16,0:16:1.87:71,0,2	0/1:9,0:9:2.47:59,0,2	1/1:8,0:8:18.80:80,19,0	0/1:5,0:5:14.93:15,0,37	1/1:5,0:5:10.91:50,11,0	1/1:11,0:11:18.73:79,19,0	1/1:31,0:31:23.10:204,23,0	1/1:18,0:18:20.46:170,20,0	0/0:18,1:19:25.09:0,25,505	0/0:15,0:16:32.91:0,33,337	0/0:6,0:6:15.03:0,15,157	0/1:3,0:3:6.49:6,0,12	1/1:8,0:8:18.97:82,19,0	1/1:4,0:4:8.19:36,8,0	1/1:11,0:11:1.78:54,2,0	0/0:19,0:19:37.81:0,38,473	0/0:10,0:11:23.89:0,24,238	0/0:12,1:13:13.06:0,13,333
chr10	90283975	.	TA	T	4608.31	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=7.433;DP=309;FS=0.000;HRun=3;HaplotypeScore=37.3012;InbreedingCoeff=0.9195;MQ=69.38;MQ0=1;MQRankSum=1.846;QD=29.35;ReadPosRankSum=2.932;VQSLOD=3.7934;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:15.02:0,15,167	1/1:1,5:6:14.99:167,15,0	0/0:10,0:10:22.14:0,22,201	0/0:9,0:5:9.91:0,10,113	1/1:2,13:14:36.05:425,36,0	0/0:13,0:13:38.99:0,39,477	0/0:6,0:6:18.06:0,18,241	0/0:32,0:32:73.02:0,73,882	1/1:0,8:8:21.07:259,21,0	1/1:1,8:9:27:312,27,0	1/1:0,13:14:32.85:364,33,0	1/1:1,8:9:21.07:258,21,0	1/1:2,6:8:24.06:284,24,0	1/1:2,2:4:6.02:73,6,0	1/1:0,4:4:12.04:148,12,0	1/1:0,10:10:27:302,27,0	1/1:3,25:28:68.28:807,68,0	1/1:1,17:18:35.21:540,35,0	0/0:19,0:19:55.02:0,55,667	0/0:13,0:13:36.08:0,36,434	0/0:4,0:4:12.04:0,12,161	1/1:0,2:2:3.01:37,3,0	1/1:1,8:9:22.31:263,22,0	1/1:0,5:5:9.03:111,9,0	1/1:0,8:8:21.07:258,21,0	0/0:18,0:18:8.25:0,8,497	0/0:9,0:9:26.99:0,27,321	0/0:13,0:13:36.59:0,37,478
chr10	90284200	.	C	CT	474.04	PASS	AC=2;AF=0.040;AN=50;BaseQRankSum=1.505;DP=490;FS=5.004;HRun=7;HaplotypeScore=64.3857;InbreedingCoeff=0.6664;MQ=39.50;MQ0=49;MQRankSum=-0.637;QD=13.54;ReadPosRankSum=0.837;VQSLOD=3.0495;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,16:31:49.02:568,49,0	./.	./.	./.	0/0:25,0:23:17.26:0,17,172	0/0:14,0:14:21.02:0,21,202	0/0:19,0:12:14.84:0,15,133	0/0:17,0:8:14.93:0,15,129	0/0:15,0:14:20.93:0,21,202	0/0:17,0:15:27.03:0,27,261	0/0:13,0:12:16.98:0,17,150	0/0:18,0:16:29.73:0,30,289	0/0:6,0:6:8.97:0,9,80	0/0:19,0:18:26.16:0,26,259	0/0:26,0:25:29.26:0,29,282	0/0:24,0:24:49.84:0,50,483	0/0:40,0:35:34.83:0,35,339	0/0:20,0:17:17.84:0,18,167	0/0:20,0:18:20.91:0,21,200	0/0:16,0:15:32.97:0,33,305	0/0:17,0:13:12.01:0,12,113	0/0:11,0:10:17.95:0,18,174	0/0:7,0:5:5.99:0,6,53	0/0:20,0:14:2.91:0,3,129	0/0:14,0:10:18.02:0,18,172	0/0:25,0:22:42.02:0,42,399	0/0:24,0:19:17.58:0,18,167	0/0:19,0:18:20.94:0,21,199
chr10	90285224	.	G	GAA	3228.29	PASS	AB=0.762;AC=30;AF=0.536;AN=56;BaseQRankSum=-0.517;DP=658;FS=12.852;HRun=15;HaplotypeScore=104.7945;InbreedingCoeff=0.2736;MQ=78.86;MQ0=7;MQRankSum=-0.736;QD=7.17;ReadPosRankSum=-0.645;VQSLOD=-0.3300;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:32:45.43:0,45,377	1/1:1,1:8:12.62:72,13,0	0/0:62,0:32:14.02:0,14,159	0/1:51,0:25:7.44:7,0,38	1/1:5,10:17:18.60:286,19,0	0/0:18,0:18:20.71:0,21,274	0/0:17,0:20:40.29:0,40,322	0/1:33,0:38:23.98:24,0,336	1/1:7,12:21:23.44:272,23,0	1/1:6,5:12:21.04:243,21,0	1/1:6,5:12:25.13:224,25,0	0/1:10,15:25:5.71:171,0,6	1/1:7,7:14:6.02:76,6,0	0/1:8,3:12:32.54:79,0,33	1/1:9,2:25:19.74:229,20,0	1/1:6,6:25:9.40:273,9,0	0/1:15,2:33:81.05:98,0,81	0/1:7,13:23:14.60:243,0,15	0/1:20,0:24:21.44:21,0,233	0/0:17,0:18:20.56:0,21,205	0/0:16,0:18:21.70:0,22,201	1/1:12,9:26:42.94:417,43,0	0/1:4,6:13:5.50:137,0,6	1/1:6,7:18:16.92:262,17,0	0/1:7,13:24:18.72:217,0,19	0/1:20,2:25:70.61:71,0,180	0/0:22,0:25:13.89:0,14,150	0/0:8,0:13:5.19:0,5,108
chr10	90286049	.	T	TTTTTG	20232.42	PASS	AB=0.972;AC=33;AF=0.589;AN=56;BaseQRankSum=6.148;DP=644;FS=8.279;HRun=0;HaplotypeScore=131.0075;InbreedingCoeff=0.9407;MQ=64.11;MQ0=4;MQRankSum=-10.119;QD=49.96;ReadPosRankSum=-1.247;VQSLOD=4.4486;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:60.20:0,60,1024	1/1:5,5:11:30.08:628,30,0	0/0:20,0:9:5.75:0,6,68	0/0:31,0:19:23.26:0,23,306	1/1:11,13:25:69.19:1609,69,0	0/0:21,0:21:54.18:0,54,979	0/0:17,0:17:39.10:0,39,634	0/0:24,0:24:27.09:0,27,461	1/1:10,11:22:51.17:1221,51,0	1/1:10,12:23:60.20:1542,60,0	1/1:12,15:28:66.21:1551,66,0	1/1:10,12:22:48.15:1257,48,0	1/1:9,11:22:57.17:1332,57,0	1/1:11,9:20:36.12:975,36,0	1/1:13,9:22:54.15:1237,54,0	1/1:12,13:25:63.20:1566,63,0	1/1:17,12:30:54.17:1296,54,0	1/1:12,7:20:42.13:837,42,0	0/0:15,0:15:27.07:0,27,415	0/0:24,0:24:63.11:0,63,989	0/0:22,0:22:51.17:0,51,922	1/1:15,9:25:57.12:1276,57,0	1/1:12,10:25:63.13:1258,63,0	1/1:10,4:14:23.55:496,24,0	1/1:16,19:35:90.28:2150,90,0	0/1:34,1:35:1.36:1,0,1348	0/0:26,0:26:54.16:0,54,910	0/0:13,0:11:23.82:0,24,417
chr10	90286083	.	AT	A	6433.70	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=13.562;DP=603;FS=18.434;HRun=11;HaplotypeScore=127.4737;InbreedingCoeff=0.9183;MQ=64.51;MQ0=2;MQRankSum=-5.706;QD=17.34;ReadPosRankSum=1.735;VQSLOD=4.1085;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,1:21:35.54:0,36,575	1/1:0,11:11:32.96:271,33,0	0/0:34,1:22:16.27:0,16,293	0/1:30,0:16:9.61:10,0,103	1/1:5,18:23:44.92:369,45,0	0/0:19,2:21:26.48:0,26,487	0/0:13,1:15:8.27:0,8,278	0/0:20,1:20:14.45:0,14,354	1/1:3,17:20:47.92:394,48,0	1/1:7,22:30:48.96:504,49,0	1/1:2,23:25:59.88:492,60,0	1/1:9,8:17:23.92:197,24,0	1/1:3,24:27:68.89:566,69,0	1/1:1,12:13:35.96:295,36,0	1/1:4,18:22:50.93:419,51,0	1/1:3,23:27:67.95:548,68,0	1/1:5,19:24:37.23:424,37,0	1/1:5,15:20:41.47:344,41,0	0/0:15,0:15:32.94:0,33,327	0/0:22,0:22:54.12:0,54,568	0/0:16,0:16:36.08:0,36,376	1/1:6,11:17:32.94:271,33,0	1/1:1,19:20:50.92:418,51,0	1/1:4,9:13:23.97:197,24,0	1/1:3,29:32:86.89:714,87,0	0/0:32,1:33:50.53:0,51,731	0/0:23,0:24:60.02:0,60,622	0/0:8,0:8:24.06:0,24,255
chr10	90288949	.	C	CCACT	8083.45	PASS	AC=30;AF=0.556;AN=54;BaseQRankSum=-10.752;DP=325;FS=3.352;HRun=0;HaplotypeScore=52.8996;InbreedingCoeff=0.9028;MQ=91.83;MQ0=0;MQRankSum=-6.886;QD=54.25;ReadPosRankSum=7.707;VQSLOD=5.3343;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:45.15:0,45,818	1/1:1,2:3:6.02:157,6,0	0/0:14,0:14:24.08:0,24,430	0/0:19,0:19:48.16:0,48,805	1/1:0,1:1:0.47:1,0,0	0/0:10,0:10:24.08:0,24,434	0/0:20,0:20:45.15:0,45,801	0/0:14,0:14:33.11:0,33,592	1/1:1,10:11:21.07:548,21,0	1/1:1,6:7:15.05:393,15,0	./.	1/1:3,13:16:36.12:940,36,0	1/1:1,2:3:6.02:156,6,0	1/1:4,6:10:15.05:392,15,0	1/1:1,10:12:27.09:705,27,0	1/1:0,14:14:39.13:1018,39,0	1/1:1,14:17:30.10:785,30,0	1/1:1,13:16:36.12:943,36,0	0/0:12,0:12:30.10:0,30,521	0/0:12,0:12:36.12:0,36,647	0/0:27,0:27:66.19:0,66,1153	1/1:0,7:7:21.07:526,21,0	1/1:2,6:8:15.05:344,15,0	1/1:3,14:16:36.12:942,36,0	1/1:1,5:6:9.03:235,9,0	0/0:14,0:14:36.12:0,36,644	0/0:12,0:12:27.09:0,27,490	0/0:1,0:1:3.01:0,3,44
chr10	90289261	.	C	CAG	3904.99	PASS	AB=1.000;AC=42;AF=0.913;AN=46;BaseQRankSum=-1.888;DP=188;FS=8.063;HRun=0;HaplotypeScore=106.4785;InbreedingCoeff=0.2794;MQ=61.58;MQ0=0;MQRankSum=-3.345;QD=21.82;ReadPosRankSum=1.110;VQSLOD=4.0379;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:33.02:418,33,0	1/1:3,0:3:8.68:68,9,0	0/0:4,0:4:1.62:0,2,64	0/1:6,0:4:27.29:27,0,32	0/1:3,0:3:0:0,0,0	1/1:5,1:6:15:186,15,0	1/1:20,2:22:56.94:668,57,0	1/1:4,0:4:9:78,9,0	1/1:5,0:5:14.99:146,15,0	./.	./.	1/1:12,1:13:32.98:350,33,0	1/1:4,0:4:11.95:127,12,0	1/1:2,0:2:5.98:47,6,0	1/1:4,0:4:11.97:95,12,0	1/1:2,0:2:6:59,6,0	1/1:12,1:13:27:319,27,0	1/1:7,0:7:18.03:192,18,0	1/1:6,0:6:15.04:236,15,0	./.	1/1:24,1:25:11.74:165,12,0	1/1:1,0:1:2.99:23,3,0	./.	1/1:16,1:17:24.02:315,24,0	1/1:7,0:7:20.67:161,21,0	1/1:6,0:6:17.94:175,18,0	1/1:6,0:6:5.98:46,6,0	./.
chr10	90290819	.	GGAGGGA	G	7977.78	PASS	AB=0.950;AC=33;AF=0.589;AN=56;BaseQRankSum=12.252;DP=567;FS=11.470;HRun=0;HaplotypeScore=129.0781;InbreedingCoeff=0.8332;MQ=72.10;MQ0=2;MQRankSum=-14.032;QD=29.44;ReadPosRankSum=3.932;VQSLOD=4.1805;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:81.28:0,81,2602	1/1:2,5:7:12.04:235,12,0	0/0:30,0:22:3.71:0,4,591	0/0:43,0:35:28.16:0,28,1115	1/1:1,4:5:5.82:79,6,0	0/0:24,0:24:60.21:0,60,1783	0/0:33,0:33:78.27:0,78,2555	0/0:21,0:21:45.15:0,45,1322	1/1:5,11:16:33.06:670,33,0	1/1:5,12:17:30.05:566,30,0	1/1:2,4:6:5.72:53,6,0	1/1:5,21:26:54.19:1172,54,0	1/1:5,9:14:21.07:456,21,0	1/1:6,9:15:24.08:521,24,0	1/1:6,25:31:60.21:1297,60,0	1/1:4,19:23:51.13:1062,51,0	1/1:12,19:31:36.12:706,36,0	1/1:6,10:16:18.02:346,18,0	0/0:21,0:21:39.13:0,39,1259	0/0:5,0:5:12.03:0,12,329	0/0:52,0:52:99:0,124,3866	1/1:2,10:12:18.02:295,18,0	1/1:2,4:6:6.02:130,6,0	1/1:14,8:22:10.28:250,10,0	1/1:1,4:5:9.03:119,9,0	0/1:18,1:19:19.99:20,0,1299	0/0:19,0:18:48.16:0,48,1571	0/0:8,0:8:21.07:0,21,667
chr10	90292824	.	ACCCC	A	6811.34	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=1.033;DP=447;FS=0.488;HRun=13;HaplotypeScore=86.8036;InbreedingCoeff=0.9039;MQ=76.71;MQ0=0;MQRankSum=-2.918;QD=25.23;ReadPosRankSum=9.596;VQSLOD=2.6707;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,3:31:25.87:177,26,0	0/0:4,0:5:11.62:0,12,157	0/0:23,0:18:38.32:0,38,566	0/0:14,0:13:11.81:0,12,201	1/1:3,14:17:33.06:481,33,0	0/0:9,0:14:26.21:0,26,337	0/0:11,0:21:44.77:0,45,496	0/0:11,0:13:9.03:0,9,128	1/1:3,9:13:20.99:287,21,0	1/1:4,17:21:51.13:737,51,0	1/1:2,12:14:27.08:395,27,0	1/1:0,12:13:27.07:375,27,0	1/1:6,10:17:27.02:374,27,0	1/1:5,14:21:39.04:530,39,0	0/0:9,0:9:12.04:0,12,249	1/1:7,16:23:45.09:657,45,0	0/0:14,0:19:39.10:0,39,677	1/1:4,23:27:60.16:872,60,0	0/0:3,0:3:6.01:0,6,84	0/0:4,0:4:3.01:0,3,45	0/0:6,0:14:15.73:0,16,178	1/1:1,14:16:38.98:479,39,0	1/1:7,8:15:17.93:239,18,0	1/1:4,25:30:58.35:812,58,0	1/1:2,10:12:27.06:395,27,0	0/0:14,0:18:2.94:0,3,239	0/0:11,0:14:33.04:0,33,506	0/0:3,0:4:9.03:0,9,156
chr10	90293228	.	AAC	A	1717.11	PASS	AB=0.941;AC=34;AF=0.607;AN=56;BaseQRankSum=14.197;DP=670;FS=7.162;HRun=0;HaplotypeScore=141.2301;InbreedingCoeff=0.6392;MQ=49.61;MQ0=16;MQRankSum=-12.721;QD=3.82;ReadPosRankSum=4.400;VQSLOD=2.0296;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:12.94:0,13,347	1/1:9,0:9:2.84:14,3,0	0/0:32,0:3:3.01:0,3,46	0/0:31,0:5:11.60:0,12,120	1/1:13,0:13:11.34:56,11,0	0/0:22,2:24:17.56:0,18,685	0/1:16,1:17:7.40:7,0,345	0/1:24,1:25:10.42:10,0,293	1/1:29,0:29:28.41:139,28,0	1/1:34,0:34:45.34:223,45,0	1/1:22,0:22:34.09:167,34,0	1/1:22,0:22:25.57:126,26,0	1/1:40,0:39:51.04:249,51,0	1/1:31,0:31:34.09:167,34,0	1/1:45,0:45:53.97:265,54,0	1/1:27,0:27:0.80:87,1,0	1/1:21,0:21:17.04:84,17,0	1/1:19,0:19:16.33:82,16,0	0/0:15,0:15:36.09:0,36,512	0/0:18,1:18:36.12:0,36,555	0/0:24,0:23:54.09:0,54,767	1/1:18,0:18:17.04:84,17,0	1/1:17,0:17:8.52:42,9,0	0/1:28,0:28:9.41:42,0,9	1/1:15,0:15:14.20:70,14,0	0/0:24,0:24:33.11:0,33,504	0/0:36,1:37:40.61:0,41,974	0/1:15,2:18:3.49:3,0,540
chr10	90293248	.	CACACACACAA	C	2786.38	PASS	AB=0.878;AC=8;AF=0.143;AN=56;BaseQRankSum=3.203;DP=667;FS=2.723;HRun=0;HaplotypeScore=210.6410;InbreedingCoeff=0.3514;MQ=55.38;MQ0=16;MQRankSum=-6.438;QD=17.86;ReadPosRankSum=-0.332;VQSLOD=2.4053;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:42.12:0,42,1638	1/1:3,4:7:9.03:175,9,0	0/0:27,0:10:24.05:0,24,339	0/0:36,0:12:35.99:0,36,824	0/0:16,0:16:13.90:0,14,120	0/0:25,0:25:69.23:0,69,2998	0/0:15,0:15:39.12:0,39,1587	0/0:24,0:24:63.12:0,63,1896	0/0:28,0:28:30.12:0,30,316	0/1:30,0:30:98.35:98,0,335	0/0:23,0:23:19.89:0,20,133	0/1:26,0:26:22.25:22,0,78	0/0:33,0:32:0.92:0,1,21	0/0:29,0:29:38.98:0,39,354	1/1:6,34:40:80.44:2042,80,0	0/1:32,0:31:4.37:4,0,379	0/1:1,20:21:42.27:583,0,42	0/0:19,0:19:14.37:0,14,143	0/0:18,0:18:54.17:0,54,2018	0/0:18,0:17:51.17:0,51,2202	0/0:29,0:27:78.24:0,78,3283	0/0:18,0:18:13.13:0,13,78	0/0:17,0:17:7.69:0,8,120	0/0:29,0:29:11.06:0,11,167	0/0:14,0:14:21.27:0,21,172	0/0:26,0:26:72.20:0,72,2289	0/0:32,0:32:81.28:0,81,3760	0/0:18,0:18:45.15:0,45,2214
chr10	90293250	.	CACACACAA	C	4577.32	PASS	AB=0.989;AC=21;AF=0.375;AN=56;BaseQRankSum=15.826;DP=661;FS=3.736;HRun=0;HaplotypeScore=182.8200;InbreedingCoeff=0.1458;MQ=58.17;MQ0=15;MQRankSum=-13.826;QD=11.98;ReadPosRankSum=4.854;VQSLOD=3.7509;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:42.10:0,42,1307	1/1:5,0:5:7.52:86,8,0	0/0:26,0:11:20.29:0,20,311	0/0:34,0:14:41.98:0,42,744	0/1:16,0:16:16.56:74,0,17	0/0:25,0:25:66.22:0,66,2392	0/0:15,0:15:45.13:0,45,1359	0/0:23,0:23:60.13:0,60,1567	0/1:28,0:28:36.07:194,0,36	0/1:30,1:31:59.47:594,0,59	0/1:23,0:23:12.37:241,0,12	1/1:26,1:27:24.73:316,25,0	1/1:32,0:31:56.79:452,57,0	0/1:30,0:30:33.70:233,0,34	1/1:38,0:38:80.35:1333,80,0	0/1:31,1:31:99:207,0,123	0/1:21,0:21:17.70:372,0,18	0/1:19,0:19:38.40:117,0,38	0/0:19,0:19:54.14:0,54,1615	0/0:19,0:18:54.14:0,54,1812	0/0:30,0:28:84.22:0,84,2714	1/1:18,0:18:7.18:126,7,0	0/1:16,1:17:33.69:61,0,34	0/1:30,0:30:64.20:77,0,64	0/1:15,0:15:12.52:91,0,13	0/0:26,0:26:69.17:0,69,1867	0/0:28,0:28:81.26:0,81,3033	0/0:16,0:16:45.15:0,45,1824
chr10	90293252	.	CACACAA	C	10301.02	PASS	AB=0.556;AC=31;AF=0.554;AN=56;BaseQRankSum=13.793;DP=654;FS=3.648;HRun=0;HaplotypeScore=143.5188;InbreedingCoeff=0.8994;MQ=59.15;MQ0=15;MQRankSum=-14.625;QD=27.40;ReadPosRankSum=4.320;VQSLOD=4.6793;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:41.59:0,42,989	1/1:4,0:4:5.97:68,6,0	0/0:24,0:11:20.28:0,20,285	0/0:35,0:15:44.97:0,45,636	1/1:2,14:16:20.29:370,20,0	0/0:25,0:25:69.20:0,69,1885	0/0:16,0:16:48.08:0,48,1092	0/0:21,0:21:63.14:0,63,1280	1/1:4,23:27:41.80:770,42,0	1/1:6,25:31:75.58:1329,76,0	1/1:1,22:23:39.13:880,39,0	1/1:3,24:27:33:667,33,0	1/1:3,29:31:57.13:1275,57,0	1/1:2,26:28:50.70:948,51,0	1/1:35,0:35:80.54:1068,81,0	1/1:4,29:32:16.74:601,17,0	1/1:21,0:21:20.98:313,21,0	1/1:3,17:20:17.77:422,18,0	0/0:20,0:20:54.14:0,54,1299	0/0:19,0:18:54.13:0,54,1439	0/0:30,0:28:78.22:0,78,2103	1/1:1,17:18:24.08:498,24,0	1/1:5,11:16:8.07:210,8,0	0/1:6,24:30:19.85:338,0,20	1/1:0,15:15:30.10:543,30,0	0/0:27,0:27:69.17:0,69,1521	0/0:27,0:27:75.19:0,75,2271	0/0:16,0:16:44.64:0,45,1439
chr10	90293593	.	G	GGC	1602.18	PASS	AB=1.000;AC=11;AF=0.239;AN=46;BaseQRankSum=-4.723;DP=213;FS=0.711;HRun=0;HaplotypeScore=41.6608;InbreedingCoeff=0.4395;MQ=83.39;MQ0=0;MQRankSum=-0.299;QD=26.27;ReadPosRankSum=4.976;VQSLOD=4.1566;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.06:0,42,498	1/1:2,4:6:18.06:293,18,0	0/0:10,0:9:9.29:0,9,93	0/0:15,0:11:17.67:0,18,210	./.	0/0:5,0:5:9.38:0,9,63	0/0:18,0:18:24.65:0,25,118	0/1:8,0:8:10.29:10,0,78	0/0:2,0:2:6:0,6,52	0/0:3,0:3:6.01:0,6,56	./.	0/0:5,0:5:6.24:0,6,76	0/1:3,0:3:7.91:8,0,20	0/1:4,0:4:6.94:7,0,22	1/1:0,13:13:29.90:527,30,0	1/1:4,0:4:2.03:6,2,0	1/1:1,22:23:51.17:895,51,0	0/0:3,0:3:5.98:0,6,46	0/0:9,0:9:17.42:0,17,84	0/0:8,0:8:12.92:0,13,75	0/0:30,0:30:37.41:0,37,198	./.	0/0:1,0:1:3:0,3,25	./.	./.	0/0:10,0:10:0.80:0,1,106	0/0:8,0:8:15.98:0,16,85	0/0:5,0:5:7.99:0,8,43
chr10	90295165	.	TTCC	T	1351.06	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=8.095;DP=418;FS=22.967;HRun=0;HaplotypeScore=55.2331;InbreedingCoeff=0.6418;MQ=61.96;MQ0=26;MQRankSum=-0.593;QD=8.09;ReadPosRankSum=3.561;VQSLOD=1.0456;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:36.08:0,36,530	0/0:6,0:5:15.05:0,15,221	0/0:28,0:10:23.87:0,24,321	0/0:23,0:14:29.22:0,29,355	0/1:13,0:10:10.28:75,0,10	0/0:7,0:6:8.23:0,8,128	0/0:20,0:19:27.11:0,27,559	0/0:48,0:39:99:0,108,1492	1/1:8,1:9:9.02:112,9,0	1/1:9,0:6:9.59:53,10,0	1/1:14,0:12:21.79:179,22,0	1/1:6,0:6:3:27,3,0	1/1:12,1:12:15.04:201,15,0	1/1:7,0:3:1.55:4,2,0	0/1:14,0:12:8.54:9,0,117	0/1:14,0:11:9.37:108,0,9	0/1:13,0:8:30.88:31,0,76	1/1:13,0:11:17.98:175,18,0	0/0:21,0:15:45.15:0,45,674	0/0:15,0:15:36.05:0,36,547	0/0:15,0:14:32.87:0,33,493	1/1:6,0:6:10.74:127,11,0	1/1:9,0:9:12.90:131,13,0	1/1:18,0:16:19.95:188,20,0	1/1:7,2:7:16.60:135,17,0	0/0:13,0:13:32.67:0,33,524	0/0:16,0:16:39:0,39,580	0/0:17,0:17:45.01:0,45,683
chr10	90295167	.	CCTT	C	2291.48	PASS	AB=0.538;AC=25;AF=0.446;AN=56;BaseQRankSum=6.175;DP=444;FS=1.716;HRun=0;HaplotypeScore=55.8641;InbreedingCoeff=0.8576;MQ=63.91;MQ0=26;MQRankSum=0.549;QD=15.91;ReadPosRankSum=6.168;VQSLOD=3.1549;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:35.92:0,36,497	0/0:6,0:5:15.02:0,15,210	0/0:34,0:12:32.87:0,33,352	0/0:24,0:15:35.64:0,36,281	1/1:7,4:10:2:193,2,0	0/0:9,0:8:13.83:0,14,170	0/0:23,0:22:57.68:0,58,685	0/0:46,0:39:99:0,110,1304	1/1:1,10:11:9.03:145,9,0	1/1:10,1:9:19.29:200,19,0	1/1:2,9:12:23.06:288,23,0	0/1:1,6:7:7.97:46,0,8	1/1:3,10:12:15.05:221,15,0	1/1:6,1:4:3:27,3,0	0/0:15,0:13:22.04:0,22,164	1/1:0,11:11:11.62:181,12,0	0/0:15,0:10:20.16:0,20,162	1/1:1,9:11:17.68:288,18,0	0/0:24,0:19:54.55:0,55,777	0/0:18,0:18:48.01:0,48,562	0/0:16,0:15:42.01:0,42,624	1/1:2,4:6:17.90:216,18,0	1/1:4,4:9:17.97:226,18,0	1/1:2,11:14:20.39:278,20,0	1/1:5,1:7:20.88:197,21,0	0/0:15,0:15:42.92:0,43,585	0/0:16,0:16:41.94:0,42,662	0/0:16,0:16:45.03:0,45,832
chr10	90296547	.	A	ATG	10467.57	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-9.638;DP=650;FS=4.337;HRun=0;HaplotypeScore=85.8115;InbreedingCoeff=0.9990;MQ=79.99;MQ0=0;MQRankSum=0.773;QD=37.65;ReadPosRankSum=3.214;VQSLOD=7.2224;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.27:0,84,1077	0/0:10,0:10:27.09:0,27,347	0/0:21,0:21:43.67:0,44,526	0/0:15,0:15:36.05:0,36,439	1/1:4,20:24:57.20:961,57,0	0/0:28,0:28:78.20:0,78,959	0/0:16,0:16:39.12:0,39,502	0/0:29,0:29:78.24:0,78,991	1/1:0,23:24:63.22:1062,63,0	1/1:7,20:27:63.21:1050,63,0	1/1:3,23:26:21.59:923,22,0	1/1:3,16:19:33.11:556,33,0	1/1:3,8:11:27.09:449,27,0	1/1:2,12:14:33.11:557,33,0	0/0:24,0:24:57.18:0,57,733	1/1:5,23:29:63.22:1063,63,0	0/0:20,0:20:54.17:0,54,695	1/1:3,10:13:30.10:506,30,0	0/0:31,0:31:75.23:0,75,952	0/0:26,0:26:69.20:0,69,872	0/0:40,0:40:99:0,99,1274	1/1:3,16:19:42.14:709,42,0	1/1:4,19:23:45.15:759,45,0	1/1:2,20:22:48.16:810,48,0	1/1:1,25:26:63.22:1063,63,0	0/0:30,0:30:69.22:0,69,888	0/0:32,0:32:84.22:0,84,1038	0/0:19,0:19:54.18:0,54,695
chr10	90301726	.	TA	T	4847.48	PASS	AB=0.883;AC=37;AF=0.661;AN=56;BaseQRankSum=8.484;DP=591;FS=9.420;HRun=13;HaplotypeScore=68.2908;InbreedingCoeff=0.7172;MQ=71.19;MQ0=2;MQRankSum=-0.056;QD=11.65;ReadPosRankSum=6.612;VQSLOD=3.7708;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,25:30:21.48:321,21,0	1/1:0,4:5:10.98:72,11,0	0/0:20,0:16:6.20:0,6,34	0/0:13,0:11:9.39:0,9,94	1/1:7,12:20:34.76:246,35,0	0/0:20,1:21:24.03:0,24,377	0/1:21,4:25:27.58:28,0,388	0/1:33,4:37:9.56:10,0,541	1/1:6,14:19:35.72:263,36,0	1/1:16,15:31:21.49:320,21,0	1/1:4,6:10:14.82:103,15,0	1/1:4,15:20:40.78:290,41,0	1/1:3,17:20:50.68:372,51,0	1/1:2,20:23:64.68:465,65,0	1/1:3,20:23:49.75:356,50,0	1/1:4,28:32:71.38:525,71,0	1/1:5,19:25:58.69:422,59,0	1/1:0,11:12:31.83:221,32,0	0/1:20,2:23:27.09:27,0,273	0/0:18,2:20:17.02:0,17,314	0/0:29,0:33:33.24:0,33,458	1/1:2,5:8:16.94:115,17,0	1/1:4,7:11:17.88:131,18,0	1/1:4,17:21:41.39:306,41,0	1/1:3,15:18:12.62:255,13,0	0/0:31,2:33:31.44:0,31,589	0/0:25,0:28:44.86:0,45,412	0/0:5,0:5:9.01:0,9,87
chr10	90301972	.	CT	C	4106.03	PASS	AB=0.959;AC=34;AF=0.607;AN=56;BaseQRankSum=12.299;DP=581;FS=1.201;HRun=13;HaplotypeScore=83.6411;InbreedingCoeff=0.8326;MQ=61.60;MQ0=1;MQRankSum=2.207;QD=11.97;ReadPosRankSum=4.335;VQSLOD=3.7787;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:31:60:0,60,554	1/1:9,12:21:23.69:206,24,0	0/1:9,0:8:12.88:13,0,50	0/0:9,0:6:11.26:0,11,112	1/1:9,20:32:1.36:309,1,0	0/0:24,1:26:31.99:0,32,449	0/0:12,1:13:11.07:0,11,249	0/0:42,2:48:65.98:0,66,735	1/1:4,11:15:29.80:219,30,0	1/1:7,17:24:46.87:335,47,0	1/1:7,13:20:35.74:262,36,0	1/1:2,10:12:26.79:193,27,0	1/1:2,9:11:23.84:175,24,0	1/1:6,16:22:32.78:240,33,0	1/1:2,16:19:48.02:337,48,0	1/1:9,17:28:51.72:362,52,0	1/1:2,20:22:53.69:394,54,0	1/1:5,18:24:49.75:357,50,0	0/1:31,3:34:2.65:3,0,438	0/0:21,0:21:27.49:0,27,313	0/0:11,0:11:18.01:0,18,166	1/1:2,4:6:11.92:88,12,0	1/1:1,11:12:23.85:175,24,0	1/1:3,11:14:26.81:197,27,0	1/1:6,12:18:32.76:241,33,0	0/0:27,0:27:46.29:0,46,425	0/0:28,0:30:64.78:0,65,605	0/0:19,0:19:56.97:0,57,515
chr10	90302997	.	TTC	T	62.84	PASS	AB=0.958;AC=9;AF=0.161;AN=56;BaseQRankSum=7.359;DP=421;FS=20.070;HRun=0;HaplotypeScore=59.6625;InbreedingCoeff=-0.2081;MQ=66.29;MQ0=12;MQRankSum=-0.222;QD=0.55;ReadPosRankSum=4.621;VQSLOD=-0.2384;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:58.86:0,59,603	0/0:7,0:6:8.76:0,9,64	0/0:23,0:13:28.51:0,29,232	0/0:13,0:6:11.74:0,12,74	0/0:14,0:13:22.26:0,22,150	0/0:9,0:9:8:0,8,270	0/0:19,0:19:50.84:0,51,573	0/0:35,0:33:73.89:0,74,735	0/0:8,0:8:8.10:0,8,67	0/1:8,1:9:7.98:8,0,30	0/1:7,0:7:6.03:6,0,38	0/0:10,0:9:6.88:0,7,79	0/1:6,3:9:29.33:29,0,72	0/1:5,0:5:13.77:14,0,14	0/0:10,0:9:14.91:0,15,132	0/1:13,0:12:7.71:8,0,86	0/0:40,0:39:95.95:0,96,1076	0/1:29,1:30:24.41:24,0,141	0/0:32,0:30:71.47:0,71,814	0/0:10,0:10:2.53:0,3,162	0/0:11,0:10:19.21:0,19,164	0/1:8,0:8:25.89:26,0,31	0/0:6,0:5:0.53:0,1,21	0/1:20,0:19:56.66:57,0,70	0/1:14,0:13:22.11:22,0,65	0/0:16,0:15:35.91:0,36,375	0/0:7,0:7:14.75:0,15,98	0/0:8,0:8:17.92:0,18,214
chr10	90303206	.	TC	T	1016.01	PASS	AC=28;AF=0.583;AN=48;BaseQRankSum=1.762;DP=139;FS=2.049;HRun=2;HaplotypeScore=15.3080;InbreedingCoeff=0.6942;MQ=30.11;MQ0=25;MQRankSum=-3.009;QD=17.22;ReadPosRankSum=0.935;VQSLOD=3.5957;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:9:18.06:0,18,268	./.	./.	./.	1/1:1,4:4:5.98:59,6,0	0/0:7,0:6:12.04:0,12,179	0/0:8,0:7:6.02:0,6,88	0/0:11,0:4:12.04:0,12,179	1/1:0,1:1:3.01:39,3,0	1/1:1,1:2:3.01:32,3,0	1/1:1,2:2:5.98:59,6,0	./.	1/1:1,3:3:9.03:116,9,0	1/1:1,3:3:9.03:113,9,0	1/1:0,1:1:3.01:39,3,0	1/1:0,1:1:3.01:39,3,0	1/1:4,5:6:12.04:155,12,0	1/1:2,3:5:9.03:116,9,0	0/0:8,0:5:15.03:0,15,203	0/0:9,0:8:24.08:0,24,347	0/0:5,0:4:9.03:0,9,125	1/1:1,3:4:6.02:77,6,0	1/1:1,5:5:9.03:116,9,0	1/1:3,4:5:6.02:77,6,0	1/1:2,5:6:12.04:155,12,0	0/0:7,0:4:12.04:0,12,177	0/0:5,0:3:6.01:0,6,90	0/0:4,0:2:5.98:0,6,65
chr10	90308460	.	C	CT	1675.99	PASS	AB=0.810;AC=31;AF=0.554;AN=56;BaseQRankSum=1.122;DP=495;FS=0.490;HRun=14;HaplotypeScore=71.5477;InbreedingCoeff=0.2488;MQ=80.84;MQ0=6;MQRankSum=0.288;QD=6.37;ReadPosRankSum=-1.456;VQSLOD=2.2096;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,2:32:39.75:0,40,356	1/1:8,2:10:3.47:72,3,0	0/0:52,0:19:9.07:0,9,76	0/0:58,0:31:10.02:0,10,79	1/1:6,7:14:1.46:109,1,0	0/0:12,0:13:26.61:0,27,175	0/0:15,1:17:2.24:0,2,132	0/0:27,2:29:9.30:0,9,202	1/1:2,5:7:12:105,12,0	1/1:6,13:19:30.71:296,31,0	1/1:6,11:18:1.41:191,1,0	1/1:6,0:6:11.57:77,12,0	0/1:3,3:6:7.20:67,0,7	0/1:12,2:13:10.18:44,0,10	1/1:5,1:6:9.86:76,10,0	1/1:2,4:6:12:106,12,0	1/1:11,18:29:17.34:206,17,0	0/1:10,14:24:21.78:201,0,22	0/1:17,2:20:12.26:12,0,176	0/1:12,4:16:20.25:20,0,139	0/0:13,0:13:14.66:0,15,96	0/1:3,0:3:0:0,0,0	0/1:3,3:6:9.07:33,0,9	1/1:5,7:13:9.44:74,9,0	1/1:7,9:16:1.63:127,2,0	0/1:11,1:14:9.32:9,0,140	0/1:10,2:13:27.05:27,0,93	0/0:13,0:13:32.32:0,32,202
chr10	90309324	.	GA	G	3079.99	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=7.635;DP=518;FS=0.000;HRun=12;HaplotypeScore=56.8810;InbreedingCoeff=0.9162;MQ=63.88;MQ0=5;MQRankSum=-1.237;QD=13.16;ReadPosRankSum=2.928;VQSLOD=3.7621;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,2:42:45.73:0,46,845	0/0:3,0:13:28.41:0,28,143	1/1:16,0:4:2.03:6,2,0	0/0:11,0:6:12.39:0,12,97	1/1:9,15:27:47.87:339,48,0	0/0:17,0:17:39.07:0,39,390	0/0:21,2:23:7.62:0,8,435	0/0:21,2:23:12.68:0,13,439	1/1:5,12:17:5.40:225,5,0	1/1:3,11:15:31.90:238,32,0	1/1:0,15:15:38.84:302,39,0	1/1:5,7:11:20.91:163,21,0	1/1:7,9:18:7.78:174,8,0	1/1:1,6:7:14.92:116,15,0	0/0:8,0:24:37.08:0,37,195	1/1:6,14:20:48.88:360,49,0	0/0:5,0:22:43.22:0,43,262	1/1:4,8:12:23.89:186,24,0	0/0:20,2:20:18.82:0,19,362	0/0:20,0:20:48.09:0,48,482	0/0:19,0:22:38.90:0,39,374	1/1:7,11:18:28.74:214,29,0	1/1:4,13:19:9.48:237,9,0	1/1:0,22:22:56.78:441,57,0	1/1:1,13:14:38.83:302,39,0	0/0:21,1:24:30.65:0,31,454	0/0:16,0:16:39.07:0,39,391	0/0:4,0:4:12.01:0,12,115
chr10	90309437	.	TAAG	T	1962.45	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.190;DP=536;FS=0.591;HRun=0;HaplotypeScore=74.0024;InbreedingCoeff=0.9682;MQ=72.59;MQ0=0;MQRankSum=-1.124;QD=33.26;ReadPosRankSum=2.683;VQSLOD=3.9803;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.27:0,84,1794	1/1:1,9:10:18.06:294,18,0	0/0:12,0:11:18.05:0,18,350	0/0:6,0:6:9.03:0,9,165	0/0:24,0:24:66.23:0,66,1474	0/0:24,0:24:69.24:0,69,1525	0/0:15,0:15:45.14:0,45,963	0/0:32,0:32:81.28:0,81,1784	0/0:13,0:13:36.12:0,36,787	0/0:31,0:31:84.29:0,84,1855	0/0:27,0:27:75.26:0,75,1619	0/0:13,0:13:39.13:0,39,870	0/0:15,0:15:42.12:0,42,887	0/0:12,0:12:36.11:0,36,760	1/1:2,16:18:39.13:636,39,0	0/0:16,0:16:48.16:0,48,1067	1/1:1,30:31:72.25:1174,72,0	0/0:7,0:7:21.07:0,21,469	0/0:21,0:21:54.19:0,54,1163	0/0:30,0:30:87.30:0,87,1908	0/0:6,0:6:18.06:0,18,402	0/0:9,0:9:21.07:0,21,469	0/0:24,0:24:69.24:0,69,1538	0/0:15,0:15:42.10:0,42,891	0/0:19,0:19:54.19:0,54,1206	0/0:27,0:27:75.26:0,75,1675	0/0:23,0:23:66.23:0,66,1470	0/0:26,0:26:75.26:0,75,1665
chr10	90310112	.	GTTTTTT	G	4866.87	PASS	AB=0.646;AC=29;AF=0.518;AN=56;BaseQRankSum=5.230;DP=539;FS=0.979;HRun=20;HaplotypeScore=109.7045;InbreedingCoeff=0.7517;MQ=53.45;MQ0=25;MQRankSum=-6.490;QD=18.86;ReadPosRankSum=6.312;VQSLOD=-0.0263;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:17:18.53:0,19,500	1/1:2,1:6:11.95:154,12,0	0/0:42,0:9:16.99:0,17,184	0/0:42,0:13:11.95:0,12,87	1/1:11,13:25:44.32:659,44,0	0/0:12,0:18:48.15:0,48,1158	0/0:18,0:20:36.12:0,36,848	0/0:25,0:30:54.18:0,54,1240	0/1:3,9:13:24.88:361,0,25	1/1:15,12:26:34.98:543,35,0	1/1:8,8:16:20.54:340,21,0	1/1:8,7:15:24.69:341,25,0	0/1:9,6:15:5.02:287,0,5	1/1:7,9:18:20.34:257,20,0	1/1:3,0:10:11.89:140,12,0	1/1:2,3:5:8.90:146,9,0	0/1:12,1:17:25.86:182,0,26	1/1:9,9:14:11.79:194,12,0	0/0:20,0:23:48.06:0,48,1111	0/0:20,0:21:39.13:0,39,932	0/0:5,0:6:15.05:0,15,338	1/1:8,8:17:23.22:355,23,0	1/1:3,11:13:23.84:375,24,0	1/1:4,4:6:12.04:181,12,0	1/1:11,6:18:23.25:352,23,0	0/0:18,0:20:45.15:0,45,1105	0/0:17,0:20:39.03:0,39,830	0/0:10,0:11:6.02:0,6,155
chr10	90310611	.	TG	T	2035.48	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.810;DP=543;FS=13.506;HRun=1;HaplotypeScore=84.5948;InbreedingCoeff=0.9813;MQ=70.30;MQ0=2;MQRankSum=0.271;QD=37.69;ReadPosRankSum=2.073;VQSLOD=3.0025;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.27:0,81,1270	1/1:0,9:9:24.08:334,24,0	0/0:38,1:33:50.97:0,51,1209	0/0:43,1:31:50.02:0,50,764	0/0:16,0:16:45.15:0,45,717	0/0:10,0:10:30.10:0,30,479	0/0:25,0:25:75.26:0,75,1193	0/0:28,0:28:81.23:0,81,1189	0/0:23,0:23:69.17:0,69,1070	0/0:18,0:18:54.17:0,54,841	0/0:19,0:19:54.66:0,55,864	0/0:26,0:26:78.27:0,78,1244	0/0:20,0:20:60.18:0,60,932	0/0:14,0:14:42.14:0,42,671	1/1:0,14:14:42.14:587,42,0	0/0:21,0:21:63.19:0,63,958	1/1:0,31:31:90.30:1256,90,0	0/0:13,0:13:36.12:0,36,575	0/0:9,0:9:24.04:0,24,356	0/0:15,0:15:45.15:0,45,719	0/0:21,0:22:60.19:0,60,929	0/0:17,0:17:51.17:0,51,811	0/0:10,0:10:30.10:0,30,480	0/0:34,0:34:96.24:0,96,1504	0/0:9,0:9:27.08:0,27,408	0/0:16,0:16:48.16:0,48,746	0/0:5,0:5:15.05:0,15,240	0/0:5,0:5:12.04:0,12,192
chr10	90310703	.	A	AG	1010.47	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.320;DP=512;FS=1.505;HRun=4;HaplotypeScore=61.9857;InbreedingCoeff=0.9638;MQ=66.29;MQ0=0;MQRankSum=-2.948;QD=28.07;ReadPosRankSum=-0.118;VQSLOD=2.9495;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:36:81.27:1105,81,0	0/0:10,0:10:30.09:0,30,340	0/0:18,0:15:20.50:0,20,244	0/0:21,0:19:41.32:0,41,436	0/0:20,0:20:54.14:0,54,603	0/0:18,0:18:51.14:0,51,579	0/0:19,0:19:54.14:0,54,603	0/0:18,0:18:51.13:0,51,564	0/0:22,0:22:66.16:0,66,734	0/0:20,0:20:57.15:0,57,638	0/0:14,0:14:33.09:0,33,374	0/0:21,0:21:60.17:0,60,681	0/0:14,0:14:39.08:0,39,421	0/0:17,0:17:51.15:0,51,579	0/0:12,0:12:33.09:0,33,374	0/0:16,0:16:48.12:0,48,535	0/0:24,0:24:63.16:0,63,702	0/0:22,0:22:53.92:0,54,629	0/0:10,0:10:27.02:0,27,281	0/0:16,0:16:48.12:0,48,535	0/0:34,0:34:86.53:0,87,1023	0/0:16,0:16:48.14:0,48,545	0/0:12,0:12:36.10:0,36,408	0/0:26,0:26:69.19:0,69,781	0/0:19,0:19:54.14:0,54,602	0/0:19,0:19:57.16:0,57,646	0/0:14,0:14:42.02:0,42,450	0/0:4,0:4:12.03:0,12,136
chr10	90311363	.	TTTTC	T	4640.67	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=15.169;DP=643;FS=25.694;HRun=0;HaplotypeScore=121.9142;InbreedingCoeff=0.9364;MQ=62.19;MQ0=3;MQRankSum=-5.377;QD=15.47;ReadPosRankSum=-2.074;VQSLOD=2.5574;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,180,3690	0/0:11,0:11:30.10:0,30,720	0/0:17,0:10:23.99:0,24,398	0/1:10,0:8:5.35:5,0,309	1/1:27,3:29:57.24:452,57,0	0/0:16,0:16:48.08:0,48,954	0/0:21,0:21:60.10:0,60,1198	0/0:28,0:27:72.13:0,72,1387	1/1:19,1:20:35.73:286,36,0	1/1:23,4:27:70.56:628,71,0	1/1:17,2:19:32.77:298,33,0	1/1:26,1:26:29.44:217,29,0	1/1:14,2:16:14.91:171,15,0	1/1:14,2:16:25.14:325,25,0	0/0:18,0:18:51.16:0,51,1121	1/1:24,1:25:53.26:422,53,0	0/0:34,0:34:96.27:0,96,2042	1/1:21,1:22:52.21:406,52,0	0/0:31,0:31:90.28:0,90,1914	0/0:19,0:18:54.14:0,54,1079	0/0:30,0:30:81.22:0,81,1777	1/1:16,1:16:35.68:267,36,0	1/1:19,0:19:35.20:246,35,0	1/1:31,2:33:64.94:515,65,0	1/1:18,1:19:49.80:401,50,0	0/0:23,0:23:11.30:0,11,1126	0/0:24,0:24:69.16:0,69,1371	0/0:8,0:8:24.08:0,24,503
chr10	90311364	.	TTTC	T	7913.06	PASS	AB=0.885;AC=27;AF=0.482;AN=56;BaseQRankSum=13.394;DP=642;FS=20.148;HRun=0;HaplotypeScore=98.7397;InbreedingCoeff=0.9198;MQ=62.17;MQ0=3;MQRankSum=-3.691;QD=25.36;ReadPosRankSum=-2.227;VQSLOD=2.9946;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,180,3086	0/0:11,0:11:30.09:0,30,592	0/0:17,0:10:23.98:0,24,333	0/0:10,0:8:10.54:0,11,259	1/1:10,20:29:62.72:654,63,0	0/0:16,0:16:48.06:0,48,789	0/0:21,0:21:60.09:0,60,994	0/0:29,0:28:75.10:0,75,1194	1/1:1,19:20:35.99:527,36,0	1/1:5,22:27:74.31:843,74,0	1/1:3,16:19:33.02:455,33,0	1/1:7,20:26:38.45:544,38,0	1/1:4,10:14:15.05:214,15,0	1/1:9,7:16:40.41:472,40,0	0/0:18,0:18:51.15:0,51,916	1/1:2,23:25:54.18:859,54,0	0/0:33,0:33:96.23:0,96,1686	1/1:14,8:22:57.46:719,57,0	0/0:31,0:31:90.22:0,90,1559	0/0:19,0:18:54.14:0,54,914	0/0:30,0:30:84.18:0,84,1503	1/1:4,13:16:35.95:482,36,0	1/1:1,18:19:35.73:476,36,0	1/1:19,15:34:74.95:934,75,0	1/1:10,9:19:55.24:661,55,0	0/1:20,3:23:73.45:73,0,937	0/0:24,0:24:69.14:0,69,1151	0/0:8,0:8:24.05:0,24,397
chr10	90311365	.	TTC	T	5440.57	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=14.621;DP=635;FS=20.096;HRun=0;HaplotypeScore=95.5153;InbreedingCoeff=0.9292;MQ=62.16;MQ0=3;MQRankSum=-5.317;QD=17.61;ReadPosRankSum=-2.182;VQSLOD=2.4494;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,169,2462	0/0:10,0:10:30.10:0,30,471	0/0:17,0:10:23.93:0,24,267	0/0:9,0:8:14.43:0,14,214	1/1:28,2:29:62.92:479,63,0	0/0:16,0:16:47.80:0,48,629	0/0:21,0:21:60.01:0,60,806	0/0:30,0:29:81.03:0,81,1018	1/1:20,0:20:35.99:336,36,0	1/1:26,1:27:73.52:618,74,0	1/1:19,0:19:32.98:300,33,0	1/1:25,1:25:38.98:362,39,0	1/1:12,0:12:15.02:142,15,0	1/1:15,0:15:41.99:375,42,0	0/0:18,0:18:51.13:0,51,732	1/1:25,0:25:54.03:519,54,0	0/0:32,0:32:95.67:0,96,1348	1/1:22,0:22:57.38:509,57,0	0/0:30,0:30:89.60:0,90,1244	0/0:19,0:18:54.07:0,54,744	0/0:29,0:29:84.19:0,84,1226	1/1:17,0:16:35.89:315,36,0	1/1:19,0:19:35.90:312,36,0	1/1:34,0:34:74.90:672,75,0	1/1:19,0:19:55.21:492,55,0	0/1:24,0:24:10.27:10,0,772	0/0:24,0:24:69.13:0,69,945	0/0:8,0:8:24.05:0,24,324
chr10	90311366	.	TC	T	4681.97	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=15.013;DP=631;FS=20.077;HRun=1;HaplotypeScore=86.5153;InbreedingCoeff=0.9651;MQ=60.59;MQ0=3;MQRankSum=-4.669;QD=16.72;ReadPosRankSum=-1.598;VQSLOD=3.5323;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,161,1902	0/0:10,0:10:30.09:0,30,365	0/0:16,0:9:22.76:0,23,197	0/0:9,0:7:3.97:0,4,162	1/1:28,0:27:63.02:432,63,0	0/0:16,0:16:44.46:0,44,495	0/0:21,0:21:59.98:0,60,652	0/0:30,0:29:81:0,81,841	1/1:20,0:20:35.85:277,36,0	1/1:27,0:27:72.72:543,73,0	1/1:18,0:18:32.84:248,33,0	1/1:23,3:25:38.75:293,39,0	1/1:12,0:12:14.93:113,15,0	1/1:15,0:15:41.83:331,42,0	0/0:19,0:19:51.05:0,51,574	1/1:25,0:25:53.64:414,54,0	0/0:32,0:32:88.39:0,88,1038	1/1:21,1:22:56.80:458,57,0	0/0:30,0:30:76.91:0,77,955	0/0:20,0:19:53.96:0,54,583	0/0:30,0:30:84.10:0,84,960	1/1:15,1:15:35.78:268,36,0	1/1:18,0:18:35.79:267,36,0	1/1:34,0:34:74.70:598,75,0	1/1:19,0:19:55.10:441,55,0	0/0:25,0:25:7.25:0,7,597	0/0:24,0:24:69.06:0,69,740	0/0:8,0:8:24.03:0,24,255
chr10	90311367	.	CT	C	306.52	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=14.971;DP=631;FS=25.095;HRun=10;HaplotypeScore=101.3856;InbreedingCoeff=0.6672;MQ=60.45;MQ0=3;MQRankSum=-2.397;QD=1.05;ReadPosRankSum=2.525;VQSLOD=-0.6604;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:60,2:62:99:0,105,1556	0/0:10,0:10:30.08:0,30,331	0/0:15,1:9:1.27:0,1,70	0/1:9,0:7:7.65:8,0,66	0/1:28,0:27:8.08:18,0,8	0/0:15,1:16:10.02:0,10,324	0/0:21,0:21:45.08:0,45,484	0/0:28,0:27:57.15:0,57,623	0/1:21,0:21:2.74:30,0,3	1/1:27,0:27:2.43:38,2,0	1/1:18,0:18:15.94:43,16,0	1/1:26,0:25:15.16:44,15,0	1/1:12,0:12:8.69:23,9,0	1/1:14,0:14:11.72:32,12,0	0/0:18,0:18:42.09:0,42,449	1/1:26,0:26:26.63:80,27,0	0/0:30,2:32:32.12:0,32,811	1/1:22,0:22:1.96:32,2,0	0/0:28,2:30:20.09:0,20,666	0/0:19,0:19:45.12:0,45,495	0/0:30,0:30:78.20:0,78,854	0/1:17,0:16:0.06:21,0,0	1/1:18,0:18:13.35:36,13,0	1/1:34,0:34:10.48:58,10,0	1/1:19,0:19:14.43:41,14,0	0/0:25,0:25:50.69:0,51,587	0/0:24,0:24:54.13:0,54,589	0/0:8,0:8:15.04:0,15,166
chr10	90311506	.	T	TA	2061.24	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.646;DP=626;FS=4.210;HRun=2;HaplotypeScore=57.3223;InbreedingCoeff=0.9942;MQ=89.25;MQ0=0;MQRankSum=0.105;QD=34.94;ReadPosRankSum=1.626;VQSLOD=4.0557;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,1420	1/1:1,6:7:18.06:259,18,0	0/0:28,0:28:75.67:0,76,898	0/0:21,0:20:57.16:0,57,686	0/0:26,0:26:78.20:0,78,928	0/0:27,0:27:78.22:0,78,952	0/0:16,0:16:45.11:0,45,529	0/0:27,0:27:78.20:0,78,949	0/0:18,0:18:45.13:0,45,545	0/0:22,0:22:63.20:0,63,781	0/0:13,0:13:39.12:0,39,483	0/0:14,0:14:42.10:0,42,494	0/0:15,0:15:42.13:0,42,521	0/0:20,0:20:54.17:0,54,669	1/1:0,28:28:81.27:1166,81,0	0/0:28,0:28:78.23:0,78,954	1/1:1,23:24:54.18:777,54,0	0/0:23,0:23:66.21:0,66,814	0/0:24,0:24:69.20:0,69,833	0/0:25,0:25:66.21:0,66,818	0/0:25,0:25:72.23:0,72,892	0/0:19,0:19:57.18:0,57,707	0/0:15,0:15:42.13:0,42,521	0/0:21,0:21:60.19:0,60,743	0/0:27,0:27:78.23:0,78,956	0/0:36,0:36:99:0,99,1227	0/0:29,0:29:81.25:0,81,1003	0/0:6,0:6:18.06:0,18,223
chr10	90311959	.	TA	T	12281.78	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=17.434;DP=577;FS=1.341;HRun=1;HaplotypeScore=84.4652;InbreedingCoeff=0.9130;MQ=55.00;MQ0=0;MQRankSum=-8.846;QD=38.62;ReadPosRankSum=0.081;VQSLOD=5.2041;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1713	1/1:1,3:4:12.04:168,12,0	0/0:2,0:2:6.02:0,6,89	0/1:2,0:2:10.36:10,0,42	1/1:2,31:33:90.16:1174,90,0	0/0:28,0:28:84.29:0,84,1343	0/0:27,0:27:81.26:0,81,1272	0/0:28,0:28:84.28:0,84,1321	1/1:2,21:23:69.21:928,69,0	1/1:2,30:32:93.31:1297,93,0	1/1:1,15:16:47.94:578,48,0	1/1:0,14:14:42.14:586,42,0	1/1:1,13:14:42.14:585,42,0	1/1:2,18:20:60.19:819,60,0	1/1:5,23:28:84.26:1140,84,0	1/1:1,20:21:63.20:863,63,0	1/1:2,16:18:48.16:668,48,0	1/1:1,8:9:24.04:313,24,0	0/0:14,0:14:42.14:0,42,669	0/0:25,0:25:75.26:0,75,1196	0/0:34,0:34:99:0,99,1564	1/1:3,17:20:60.14:797,60,0	1/1:5,19:24:72.10:922,72,0	1/1:1,19:20:45.62:629,46,0	1/1:2,18:20:60.18:805,60,0	0/0:18,0:17:54.18:0,54,841	0/0:35,0:35:99:0,105,1654	0/0:12,0:12:36.10:0,36,542
chr10	90311983	.	AT	A	7271.57	PASS	AB=0.833;AC=33;AF=0.589;AN=56;BaseQRankSum=17.883;DP=591;FS=1.402;HRun=9;HaplotypeScore=99.9565;InbreedingCoeff=0.9143;MQ=59.03;MQ0=0;MQRankSum=-7.983;QD=22.17;ReadPosRankSum=-1.018;VQSLOD=4.5609;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.28:0,93,1073	1/1:1,3:4:9:82,9,0	0/1:4,1:5:14.55:15,0,93	0/0:5,0:5:12.03:0,12,136	1/1:6,23:29:68.98:621,69,0	0/0:27,0:27:69.20:0,69,788	0/0:26,0:26:72.20:0,72,822	0/0:27,2:29:53.77:0,54,873	1/1:2,19:21:57.03:521,57,0	1/1:8,29:37:93.03:848,93,0	1/1:3,16:19:18.79:356,19,0	1/1:0,19:19:48.02:439,48,0	1/1:2,14:16:39.01:357,39,0	1/1:2,22:24:60.01:548,60,0	1/1:2,26:28:78.01:705,78,0	1/1:4,17:21:51:462,51,0	1/1:4,9:13:21:192,21,0	1/1:0,12:12:33.02:302,33,0	0/0:17,1:18:23.67:0,24,519	0/0:23,0:23:66.17:0,66,743	0/0:28,0:28:75.22:0,75,865	1/1:1,16:17:45.02:411,45,0	1/1:1,23:24:63.03:576,63,0	1/1:3,15:18:41.96:376,42,0	1/1:4,17:21:51.01:461,51,0	0/0:26,0:25:72.21:0,72,831	0/0:37,0:37:99:0,102,1166	0/0:11,0:11:30.09:0,30,346
chr10	90314699	.	ATTTTC	A	2439.45	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=5.378;DP=405;FS=6.968;HRun=0;HaplotypeScore=88.3626;InbreedingCoeff=0.8409;MQ=57.95;MQ0=12;MQRankSum=-3.550;QD=17.30;ReadPosRankSum=1.961;VQSLOD=2.7117;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:50.87:0,51,862	0/0:6,0:6:9:0,9,98	0/0:15,0:9:4.51:0,5,54	0/0:26,0:8:14.51:0,15,133	1/1:11,0:11:12.04:198,12,0	0/0:14,0:13:32.66:0,33,484	0/0:18,0:17:36.08:0,36,601	0/0:17,0:16:23.92:0,24,361	1/1:17,1:17:27.03:367,27,0	1/1:8,0:8:15.02:187,15,0	0/1:5,0:5:0:0,0,0	1/1:10,1:11:13.84:168,14,0	0/1:6,0:5:7.54:68,0,8	1/1:9,0:9:17.54:194,18,0	0/0:17,0:17:26.56:0,27,372	1/1:15,2:17:13.22:270,13,0	0/0:19,0:19:38.88:0,39,593	1/1:17,0:16:25.53:317,26,0	0/0:25,0:25:54.03:0,54,927	0/0:7,0:6:8.99:0,9,126	0/0:13,0:13:27.06:0,27,594	1/1:4,0:4:5.98:70,6,0	1/1:6,0:6:12.01:118,12,0	1/1:19,0:17:33.05:429,33,0	1/1:10,0:10:21.04:264,21,0	0/0:22,0:21:50.47:0,50,902	0/0:20,0:20:32.70:0,33,430	0/0:14,0:14:21.01:0,21,366
chr10	90314713	.	TCTTTTC	T	1639.81	PASS	AB=0.917;AC=18;AF=0.321;AN=56;BaseQRankSum=7.451;DP=406;FS=4.872;HRun=0;HaplotypeScore=95.8762;InbreedingCoeff=0.3242;MQ=51.41;MQ0=19;MQRankSum=-5.617;QD=11.88;ReadPosRankSum=-0.153;VQSLOD=2.1028;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:23.17:0,23,1248	0/1:6,0:6:12.76:13,0,150	0/0:12,0:6:3.20:0,3,129	0/0:25,0:7:15.05:0,15,278	0/1:7,0:7:7.42:193,0,7	0/0:14,0:12:35.56:0,36,708	0/0:19,0:16:44.69:0,45,845	0/0:24,0:23:35.93:0,36,871	0/1:14,5:16:1.76:267,0,2	1/1:9,1:9:15.72:166,16,0	0/0:3,0:3:6.46:0,6,49	0/1:7,0:9:11.39:82,0,11	0/1:5,0:4:1.36:1,0,20	1/1:11,0:11:8.54:129,9,0	0/0:13,0:13:0.48:0,0,525	1/1:13,0:13:8.07:156,8,0	0/0:22,0:21:51:0,51,913	0/1:15,0:15:41.33:208,0,41	0/0:29,0:29:84.89:0,85,1660	0/0:10,0:9:15.03:0,15,246	0/0:10,0:10:25.64:0,26,750	0/1:5,0:5:17.40:44,0,17	1/1:3,1:4:8.79:75,9,0	1/1:21,1:20:9.91:301,10,0	0/1:8,1:11:24.44:177,0,24	0/0:22,0:21:59.62:0,60,1307	0/0:17,0:17:29.23:0,29,680	0/0:13,0:12:29.97:0,30,564
chr10	90314714	.	CTTTTCT	C	2905.88	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=4.781;DP=416;FS=5.064;HRun=0;HaplotypeScore=94.1431;InbreedingCoeff=0.8152;MQ=50.98;MQ0=19;MQRankSum=-4.757;QD=21.21;ReadPosRankSum=-1.158;VQSLOD=2.5936;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:36:54.87:0,55,1087	0/0:6,0:6:1.28:0,1,102	0/0:12,0:6:4.56:0,5,54	0/0:25,0:7:14.93:0,15,155	1/1:2,4:7:2.94:256,3,0	0/0:15,0:13:41.98:0,42,684	0/0:19,0:16:40.92:0,41,750	0/0:25,0:24:48.52:0,49,765	1/1:17,2:16:32.86:447,33,0	1/1:2,8:9:17.23:245,17,0	0/1:3,0:3:0.03:0,0,0	1/1:8,1:9:18.68:186,19,0	1/1:4,0:4:2.04:71,2,0	1/1:9,2:11:10.17:220,10,0	0/0:13,0:13:3.74:0,4,453	1/1:13,1:14:31.86:312,32,0	0/0:24,0:22:28.29:0,28,733	1/1:14,2:15:16.40:356,16,0	0/0:28,0:28:74.87:0,75,1319	0/0:11,0:10:11.99:0,12,166	0/0:12,0:12:33.52:0,34,743	1/1:4,1:5:5.98:87,6,0	1/1:5,0:5:11.92:134,12,0	1/1:19,3:20:32.62:521,33,0	1/1:11,0:11:20.86:276,21,0	0/0:22,0:21:60.06:0,60,1202	0/0:16,0:17:23.97:0,24,576	0/0:13,0:13:23.63:0,24,468
chr10	90314718	.	TC	T	1889.10	PASS	AB=0.962;AC=29;AF=0.518;AN=56;BaseQRankSum=7.715;DP=402;FS=14.015;HRun=1;HaplotypeScore=62.9759;InbreedingCoeff=0.5132;MQ=48.49;MQ0=22;MQRankSum=-5.845;QD=9.45;ReadPosRankSum=-0.433;VQSLOD=-0.3073;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:26.29:0,26,358	0/1:6,0:6:19.80:20,0,36	0/0:12,0:6:4.28:0,4,53	0/0:24,0:6:15.01:0,15,143	1/1:7,0:7:16.78:124,17,0	0/0:16,0:14:8.23:0,8,150	0/0:19,0:16:30.01:0,30,252	0/1:23,0:22:8.03:8,0,246	1/1:18,0:15:25.41:213,25,0	1/1:11,0:10:21.40:167,21,0	0/0:1,0:1:0.47:0,0,1	1/1:7,1:8:16.45:128,16,0	1/1:5,0:4:10.25:84,10,0	1/1:11,0:11:21.05:177,21,0	0/1:11,2:13:43.55:44,0,99	1/1:14,0:14:34.87:246,35,0	0/0:22,0:19:3.14:0,3,156	1/1:15,0:14:2.79:209,3,0	0/0:29,0:29:13.77:0,14,523	0/0:5,6:10:12:0,12,111	0/0:12,0:12:31.32:0,31,292	1/1:2,2:4:5.96:45,6,0	1/1:5,0:5:11.98:101,12,0	1/1:22,0:20:33.40:283,33,0	1/1:9,0:9:23.84:191,24,0	0/0:22,0:21:26.32:0,26,393	0/1:15,1:16:29.24:29,0,125	0/1:13,0:10:16.59:17,0,138
chr10	90314741	.	C	CT	502.31	PASS	AB=1.000;AC=7;AF=0.135;AN=52;BaseQRankSum=3.681;DP=354;FS=3.851;HRun=7;HaplotypeScore=66.6694;InbreedingCoeff=0.6036;MQ=38.18;MQ0=24;MQRankSum=-1.789;QD=8.97;ReadPosRankSum=0.231;VQSLOD=1.1705;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:44.95:0,45,418	1/1:1,4:5:6.02:72,6,0	./.	./.	0/0:10,0:10:12.01:0,12,116	0/0:15,0:14:27.03:0,27,255	0/0:18,0:13:27.04:0,27,260	0/0:22,1:20:29.60:0,30,264	0/0:15,0:11:5.65:0,6,58	0/0:11,0:9:15.02:0,15,145	0/0:4,0:4:3:0,3,29	0/1:8,0:8:1.72:2,0,48	0/0:3,0:2:3:0,3,29	0/0:11,0:11:17.91:0,18,172	1/1:5,9:14:21.06:247,21,0	0/0:9,0:9:14.97:0,15,145	1/1:19,10:23:6.60:305,7,0	0/0:16,0:15:24.02:0,24,232	0/0:19,0:19:26.98:0,27,259	0/0:8,0:8:6.01:0,6,57	0/0:16,0:16:20.68:0,21,202	0/0:7,0:7:12.01:0,12,114	0/0:5,0:5:12.02:0,12,116	0/0:18,0:16:12.37:0,12,140	0/0:5,0:5:6.01:0,6,58	0/0:17,0:16:18.01:0,18,174	0/0:15,0:15:20.98:0,21,202	0/0:12,0:9:15.02:0,15,145
chr10	90315029	.	C	CA	1967.39	PASS	AB=0.792;AC=30;AF=0.536;AN=56;BaseQRankSum=-3.129;DP=421;FS=0.517;HRun=15;HaplotypeScore=86.2827;InbreedingCoeff=0.1804;MQ=53.15;MQ0=7;MQRankSum=-0.603;QD=6.07;ReadPosRankSum=-0.648;VQSLOD=2.6028;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,2:26:10.24:10,0,162	0/1:5,0:6:0:0,0,0	0/0:3,0:2:2.68:0,3,12	0/0:5,0:2:1.48:0,1,3	0/1:7,4:12:21.11:53,0,21	0/0:14,1:19:7.06:0,7,114	0/0:11,0:13:5.29:0,5,128	0/1:29,1:29:45.19:45,0,172	1/1:5,14:19:31.19:251,31,0	1/1:11,10:22:9.94:189,10,0	1/1:3,3:6:3:25,3,0	1/1:12,4:16:5.52:119,6,0	1/1:4,9:13:4.38:80,4,0	1/1:10,0:10:5.97:46,6,0	1/1:6,13:19:7.74:160,8,0	0/1:7,7:15:9.21:138,0,9	1/1:8,11:21:36.72:308,37,0	1/1:7,15:24:8.99:269,9,0	0/1:17,2:19:10.39:10,0,144	0/1:9,2:12:2.60:3,0,91	0/0:13,0:16:1.94:0,2,104	0/1:3,5:8:3.15:86,0,3	1/1:3,6:9:5.60:127,6,0	0/1:9,10:20:10.33:149,0,10	0/1:9,4:12:6.99:62,0,7	0/0:20,0:21:30.23:0,30,180	0/0:14,0:17:33.40:0,33,190	0/0:3,0:3:5.86:0,6,36
chr10	90316103	.	A	AT	2663.48	PASS	AB=0.601;AC=22;AF=0.393;AN=56;BaseQRankSum=-2.492;DP=530;FS=0.412;HRun=1;HaplotypeScore=71.4724;InbreedingCoeff=0.7444;MQ=48.84;MQ0=8;MQRankSum=2.239;QD=11.84;ReadPosRankSum=-0.044;VQSLOD=1.7623;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:53.32:0,53,393	0/0:9,0:9:15.27:0,15,134	0/0:11,0:3:3.01:0,3,38	0/0:7,0:4:3.99:0,4,15	1/1:15,10:25:45.58:413,46,0	0/0:22,0:22:59.64:0,60,561	0/0:19,0:19:44.58:0,45,355	0/0:38,0:36:86.18:0,86,660	1/1:4,12:15:9.39:116,9,0	1/1:19,3:20:44.87:446,45,0	1/1:6,18:24:12.01:284,12,0	0/1:4,11:15:9.51:120,0,10	0/1:4,7:11:0.84:1,0,21	1/1:15,5:20:22.12:319,22,0	0/0:18,0:18:45.61:0,46,328	0/1:5,9:14:1.89:102,0,2	0/0:28,0:26:45.33:0,45,366	1/1:13,6:16:24.89:302,25,0	0/0:24,0:25:68.80:0,69,718	0/0:26,0:26:57.74:0,58,511	0/0:8,0:8:23.85:0,24,213	0/1:5,8:13:0.22:177,0,0	1/1:18,2:19:26.50:250,27,0	1/1:1,5:7:11.07:122,11,0	1/1:6,12:18:21.80:213,22,0	0/0:21,0:21:54.55:0,55,463	0/0:23,0:23:60.21:0,60,481	0/0:18,0:16:47.91:0,48,466
chr10	90316104	.	T	TTA	2151.60	PASS	AB=0.966;AC=17;AF=0.304;AN=56;BaseQRankSum=-0.718;DP=536;FS=2.440;HRun=0;HaplotypeScore=86.2862;InbreedingCoeff=0.4122;MQ=48.90;MQ0=8;MQRankSum=0.062;QD=10.05;ReadPosRankSum=-0.548;VQSLOD=3.4191;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:50.78:0,51,404	0/0:6,0:8:17.51:0,18,162	0/0:11,0:3:5.79:0,6,61	0/0:7,0:4:5.40:0,5,30	1/1:21,3:25:44.12:431,44,0	0/0:20,0:21:57.98:0,58,610	0/0:20,0:21:44.88:0,45,397	0/0:35,0:35:87.12:0,87,684	1/1:15,0:15:5.94:82,6,0	1/1:9,13:20:44.83:439,45,0	0/1:23,1:24:4.16:189,0,4	0/1:16,0:16:39.38:98,0,39	0/0:11,0:12:6.01:0,6,54	0/1:18,0:20:13.74:207,0,14	0/0:17,0:19:27.49:0,27,330	0/1:13,0:13:23.68:68,0,24	0/0:29,0:28:55.30:0,55,456	0/1:19,0:16:0.02:170,0,0	0/0:23,0:24:70.70:0,71,826	0/0:26,0:28:24.15:0,24,552	0/0:8,0:8:23.95:0,24,254	0/1:14,1:14:21.71:141,0,22	0/1:19,0:20:9.16:233,0,9	1/1:7,0:7:8.98:83,9,0	1/1:15,2:17:7.02:188,7,0	0/0:18,0:21:55.72:0,56,505	0/0:23,0:23:63.31:0,63,536	0/0:17,0:17:47.89:0,48,546
chr10	90318168	.	C	CAAATTTT	30603.54	PASS	AB=0.960;AC=33;AF=0.589;AN=56;BaseQRankSum=-11.269;DP=611;FS=3.249;HRun=0;HaplotypeScore=120.8181;InbreedingCoeff=0.9240;MQ=69.82;MQ0=0;MQRankSum=-18.077;QD=82.49;ReadPosRankSum=2.783;VQSLOD=5.5007;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.23:0,72,1833	1/1:1,10:12:27.09:1086,27,0	0/0:13,0:13:39.11:0,39,845	0/0:16,0:16:36.30:0,36,660	1/1:3,15:24:51.14:1712,51,0	0/0:23,0:23:66.20:0,66,1631	0/0:17,0:17:48.16:0,48,1265	0/0:38,0:38:99:0,105,2431	1/1:4,16:25:54.19:2122,54,0	1/1:7,17:32:78.19:2748,78,0	1/1:1,20:23:63.13:2411,63,0	1/1:4,11:18:39.13:1516,39,0	1/1:2,20:25:66.23:2553,66,0	1/1:4,14:20:54.19:2092,54,0	1/1:3,23:30:69.24:2759,69,0	1/1:1,20:25:57.20:2278,57,0	1/1:3,11:17:27.09:1025,27,0	1/1:0,8:10:24.08:905,24,0	0/0:23,0:23:66.21:0,66,1594	0/0:30,0:30:84.27:0,84,2152	0/0:8,0:8:24.07:0,24,578	1/1:1,20:23:60.21:2337,60,0	1/1:6,21:33:75.26:2835,75,0	1/1:1,8:12:17.57:723,18,0	1/1:2,13:18:36.12:1448,36,0	0/1:23,1:24:54.58:55,0,1404	0/0:37,0:37:99:0,111,2705	0/0:10,0:10:30.10:0,30,791
chr10	90319755	.	A	AC	1653.38	PASS	AB=0.746;AC=48;AF=0.857;AN=56;BaseQRankSum=6.062;DP=486;FS=1.353;HRun=1;HaplotypeScore=157.5290;InbreedingCoeff=0.2725;MQ=82.04;MQ0=0;MQRankSum=6.725;QD=3.67;ReadPosRankSum=7.587;VQSLOD=0.0891;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,9:28:26.86:107,27,0	1/1:2,1:3:3.75:27,4,0	0/0:12,0:14:19.18:0,19,116	0/0:19,0:20:19.48:0,19,143	0/1:9,4:16:21.47:21,0,25	0/1:5,8:16:2.95:29,0,3	1/1:15,4:23:35.45:167,35,0	1/1:9,7:17:1.90:44,2,0	1/1:9,3:12:6.45:57,6,0	1/1:10,7:19:10.07:85,10,0	1/1:4,6:10:0.32:14,0,0	1/1:9,4:16:7.92:59,8,0	1/1:11,6:17:15.29:71,15,0	1/1:8,6:14:9.25:59,9,0	1/1:10,8:18:12.51:85,13,0	1/1:10,3:17:22.47:81,22,0	1/1:19,8:33:24.19:135,24,0	1/1:10,9:19:21.98:89,22,0	1/1:6,3:12:19.13:73,19,0	1/1:14,8:24:9.77:77,10,0	1/1:14,8:25:23.63:106,24,0	0/1:8,2:10:12.34:31,0,12	1/1:5,2:9:2.97:18,3,0	1/1:9,7:23:16.35:111,16,0	0/1:7,6:13:10.89:19,0,11	1/1:13,8:24:32.01:147,32,0	1/1:15,7:23:13.85:70,14,0	1/1:5,4:9:5.44:16,5,0
chr10	90319813	.	TA	T	1084.92	PASS	AB=0.813;AC=27;AF=0.482;AN=56;BaseQRankSum=2.948;DP=463;FS=10.122;HRun=17;HaplotypeScore=84.4179;InbreedingCoeff=-0.0243;MQ=73.65;MQ0=1;MQRankSum=0.540;QD=3.28;ReadPosRankSum=3.715;VQSLOD=-0.5371;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,2:16:17.79:0,18,132	0/1:8,2:11:12.74:13,0,86	0/0:29,0:18:18.79:0,19,118	0/0:19,0:12:18.13:0,18,126	0/1:10,2:14:2.31:73,0,2	0/0:15,1:18:13.27:0,13,144	0/0:11,1:13:12.80:0,13,171	0/1:14,3:18:5.79:6,0,131	1/1:8,7:15:23.06:132,23,0	0/1:9,6:17:21.64:71,0,22	0/1:7,4:13:2.47:73,0,2	0/1:14,6:20:14.80:104,0,15	1/1:5,4:9:11.47:67,11,0	1/1:8,7:18:27.31:136,27,0	0/1:17,3:20:26.71:27,0,169	1/1:6,1:9:13.97:64,14,0	0/1:14,4:18:23.35:23,0,195	1/1:8,9:21:12.79:135,13,0	0/1:18,0:20:3.76:4,0,168	0/0:16,0:17:6.41:0,6,163	0/1:7,1:8:7.01:7,0,39	0/1:11,2:15:26.18:27,0,26	0/1:6,6:12:3.60:76,0,4	0/1:6,3:9:6.36:64,0,6	1/1:7,10:18:1.32:98,1,0	0/1:18,3:25:41.32:41,0,117	0/1:17,2:21:13.01:13,0,72	0/0:14,2:20:0.55:0,1,219
chr10	90320179	.	C	CTATTAT	2501.53	PASS	AC=36;AF=0.857;AN=42;BaseQRankSum=-3.079;DP=261;FS=10.030;HRun=0;HaplotypeScore=53.8759;InbreedingCoeff=0.4341;MQ=70.72;MQ0=1;MQRankSum=-2.286;QD=12.63;ReadPosRankSum=0.233;VQSLOD=0.0585;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:22:14.77:104,15,0	0/0:2,0:4:5.05:0,5,48	./.	./.	1/1:6,0:9:8.24:119,8,0	1/1:3,1:4:6.02:133,6,0	./.	1/1:29,0:28:9.03:162,9,0	1/1:8,1:9:3.01:97,3,0	./.	1/1:6,0:6:3.85:11,4,0	1/1:5,1:6:3.01:97,3,0	./.	1/1:4,0:5:6.02:156,6,0	0/0:5,0:8:3.01:0,3,42	1/1:8,0:9:12.04:350,12,0	0/0:3,0:14:12.04:0,12,168	1/1:9,0:9:11.94:160,12,0	1/1:10,2:13:9:183,9,0	1/1:7,0:7:3.01:79,3,0	1/1:7,0:7:6.02:139,6,0	./.	1/1:7,0:7:2.22:7,2,0	1/1:0,0:2:3.01:83,3,0	1/1:10,0:19:12.04:335,12,0	./.	1/1:4,6:10:8.96:212,9,0	1/1:17,7:24:6.02:194,6,0
chr10	90320216	.	T	TA	187.78	PASS	AB=0.915;AC=14;AF=0.259;AN=54;BaseQRankSum=7.200;DP=177;FS=7.155;HRun=0;HaplotypeScore=27.2845;InbreedingCoeff=-0.0259;MQ=76.96;MQ0=1;MQRankSum=-4.410;QD=3.13;ReadPosRankSum=2.080;VQSLOD=1.0574;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:5.79:0,6,155	0/0:3,0:3:8.03:0,8,70	0/0:8,0:7:13.26:0,13,141	0/0:3,0:3:2.99:0,3,42	0/1:8,0:8:25.96:26,0,195	0/0:4,0:4:5.87:0,6,105	0/0:1,0:1:3.01:0,3,42	0/0:23,1:23:31.68:0,32,867	0/0:5,0:5:8.87:0,9,145	0/0:3,0:3:6.02:0,6,84	0/1:4,2:6:77.32:77,0,149	1/1:1,0:1:1.82:5,2,0	0/0:6,0:6:12.04:0,12,156	1/1:2,0:2:5.10:22,5,0	0/0:5,0:5:8.99:0,9,89	0/0:6,0:6:10.60:0,11,187	0/0:17,0:17:29.98:0,30,323	0/1:8,1:9:32.73:33,0,214	0/1:7,0:7:25.20:25,0,181	0/1:1,1:2:19.28:19,0,36	1/1:2,0:2:4.83:48,5,0	0/0:2,0:2:5.97:0,6,47	0/1:4,0:4:30.48:30,0,113	0/0:2,0:2:6.02:0,6,78	0/1:11,0:11:29.71:30,0,263	./.	0/0:12,0:12:4.16:0,4,226	0/1:8,0:8:17.12:17,0,17
chr10	90320687	.	T	TG	2313.21	PASS	AB=0.571;AC=25;AF=0.446;AN=56;BaseQRankSum=6.260;DP=698;FS=2.425;HRun=0;HaplotypeScore=70.4502;InbreedingCoeff=0.8418;MQ=47.83;MQ0=116;MQRankSum=6.375;QD=8.66;ReadPosRankSum=7.389;VQSLOD=3.3089;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:23:61.43:0,61,418	0/0:6,0:3:6:0,6,54	0/0:64,0:9:23.27:0,23,163	0/0:49,0:10:10.54:0,11,83	1/1:6,16:20:10.54:273,11,0	0/0:29,0:26:71.37:0,71,599	0/0:14,0:13:34.87:0,35,269	0/0:44,0:39:99:0,112,920	1/1:3,15:17:16.91:168,17,0	1/1:10,23:25:55.24:521,55,0	1/1:11,11:19:36.24:269,36,0	1/1:10,13:18:4.54:142,5,0	1/1:4,15:15:3.40:43,3,0	1/1:5,11:17:11.56:135,12,0	0/0:21,0:19:28.10:0,28,216	1/1:5,16:22:4.72:183,5,0	0/0:31,0:29:44.41:0,44,362	1/1:7,21:29:19.49:257,19,0	0/0:51,0:23:68.72:0,69,566	0/0:15,0:13:35.87:0,36,290	0/0:17,0:13:36.22:0,36,260	1/1:0,12:12:23.21:166,23,0	1/1:5,8:9:18.92:152,19,0	1/1:9,6:11:13.17:175,13,0	0/1:4,12:13:5.81:44,0,6	0/0:18,0:15:38.87:0,39,335	0/0:28,0:26:71.64:0,72,560	0/0:13,0:6:14.98:0,15,126
chr10	90320695	.	T	TG	2265.64	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=6.955;DP=675;FS=6.918;HRun=0;HaplotypeScore=65.1682;InbreedingCoeff=0.6817;MQ=49.04;MQ0=116;MQRankSum=5.289;QD=8.52;ReadPosRankSum=8.066;VQSLOD=2.0991;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:22:60.47:0,60,396	0/0:5,0:2:3:0,3,27	0/0:66,0:9:9.42:0,9,102	0/0:48,0:10:9.89:0,10,66	1/1:21,0:19:27.85:273,28,0	0/0:30,0:27:74.36:0,74,622	0/0:12,0:11:29.87:0,30,237	0/0:42,0:37:99:0,108,878	1/1:15,2:16:21.91:163,22,0	1/1:35,0:27:60.59:497,61,0	1/1:23,1:21:45.11:317,45,0	1/1:24,0:18:9.12:182,9,0	1/1:18,0:14:6.30:48,6,0	0/1:16,0:15:2.88:132,0,3	0/0:14,0:12:29.48:0,29,225	1/1:22,1:22:13.86:216,14,0	0/0:23,0:21:50.68:0,51,395	0/1:33,0:30:14.99:198,0,15	0/0:48,0:20:59.84:0,60,505	0/0:16,0:14:38.89:0,39,323	0/0:17,0:13:36.98:0,37,270	1/1:10,0:10:16.30:114,16,0	1/1:14,0:10:21.93:163,22,0	0/1:16,0:12:5.20:142,0,5	0/1:15,0:12:16.46:25,0,16	0/0:16,0:13:32.59:0,33,298	0/0:28,0:25:67.27:0,67,509	0/0:14,0:7:16.52:0,17,128
chr10	90320914	.	G	GA	1418.69	PASS	AB=0.865;AC=26;AF=0.464;AN=56;BaseQRankSum=10.516;DP=574;FS=7.004;HRun=14;HaplotypeScore=94.8860;InbreedingCoeff=0.2561;MQ=57.41;MQ0=15;MQRankSum=-2.311;QD=4.01;ReadPosRankSum=-0.442;VQSLOD=1.3920;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:29:39.65:0,40,367	1/1:8,0:8:3.54:8,4,0	0/0:36,0:8:0.57:0,1,42	0/1:30,0:5:1.84:6,0,2	1/1:18,6:24:8.09:197,8,0	0/0:14,1:16:5.18:0,5,151	0/0:23,0:24:41.77:0,42,296	0/0:29,1:29:14.67:0,15,325	0/1:20,1:21:34.98:96,0,35	0/1:17,5:23:1.50:164,0,1	1/1:21,4:24:14.39:192,14,0	0/1:9,8:18:17.93:118,0,18	1/1:11,0:10:10.13:59,10,0	0/1:15,3:18:16.36:100,0,16	1/1:23,0:23:19.75:55,20,0	0/1:12,1:13:5.42:87,0,5	1/1:38,0:37:1.22:18,1,0	0/1:9,3:12:1.39:67,0,1	0/1:30,0:29:31.85:32,0,199	0/0:21,0:21:42.72:0,43,265	0/0:4,0:8:9.42:0,9,43	1/1:6,1:7:7.54:56,8,0	1/1:10,4:13:7.74:144,8,0	0/1:11,3:14:9.17:73,0,9	0/1:19,4:24:13.60:122,0,14	0/0:21,0:22:45.56:0,46,257	0/0:23,0:22:54.29:0,54,322	0/0:7,1:8:18.50:0,18,113
chr10	90320928	.	AC	A	5307.35	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=11.322;DP=616;FS=10.031;HRun=1;HaplotypeScore=89.1731;InbreedingCoeff=0.8927;MQ=61.93;MQ0=14;MQRankSum=1.552;QD=15.34;ReadPosRankSum=0.073;VQSLOD=3.6987;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:74.33:0,74,702	1/1:0,4:4:12.04:157,12,0	0/0:43,0:14:21.78:0,22,220	0/1:38,0:8:10.05:10,0,58	1/1:24,0:25:62.86:411,63,0	0/0:15,0:15:39.29:0,39,386	0/0:21,0:20:26.34:0,26,492	0/0:34,0:33:95.15:0,95,970	1/1:21,0:22:44.56:284,45,0	1/1:24,0:24:57.61:361,58,0	1/1:30,1:31:70.98:461,71,0	1/1:16,0:16:25.66:142,26,0	1/1:13,1:13:34.05:259,34,0	1/1:12,0:13:30.25:210,30,0	1/1:2,27:29:60.08:745,60,0	1/1:15,0:15:36.86:245,37,0	1/1:4,34:37:72.04:892,72,0	1/1:13,0:13:30.65:202,31,0	0/0:32,0:31:66.64:0,67,665	0/0:21,0:21:29.03:0,29,518	0/0:8,0:8:1.19:0,1,91	1/1:7,0:7:15.10:86,15,0	1/1:14,0:14:33.17:204,33,0	1/1:14,0:14:29.50:171,30,0	1/1:28,0:28:66.02:469,66,0	0/0:28,0:27:62.60:0,63,663	0/0:24,2:25:43.27:0,43,620	0/0:11,0:11:28.49:0,28,277
chr10	90322514	.	GT	G	1558.99	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.846;DP=782;FS=2.115;HRun=9;HaplotypeScore=92.6259;InbreedingCoeff=0.9987;MQ=75.00;MQ0=5;MQRankSum=-0.081;QD=20.25;ReadPosRankSum=3.067;VQSLOD=4.0335;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:83.41:0,83,950	1/1:1,11:12:33.01:302,33,0	0/0:70,0:40:53.51:0,54,658	0/0:58,1:37:23.01:0,23,517	0/0:40,1:41:71.65:0,72,1042	0/0:25,0:25:63.19:0,63,727	0/0:20,0:20:57.14:0,57,638	0/0:26,0:25:57.17:0,57,657	0/0:36,0:36:93.22:0,93,1032	0/0:33,1:33:50.13:0,50,812	0/0:26,0:26:69.19:0,69,784	0/0:19,0:19:51.15:0,51,587	0/0:22,0:22:60.14:0,60,662	0/0:18,0:18:42.12:0,42,485	1/1:7,26:33:78.03:714,78,0	0/0:21,1:22:29.70:0,30,585	1/1:2,30:32:75.04:686,75,0	0/0:22,0:22:57.06:0,57,630	0/0:20,0:20:60.10:0,60,637	0/0:23,0:24:60:0,60,662	0/0:16,0:16:42.12:0,42,485	0/0:27,1:28:50.63:0,51,801	0/0:19,0:19:50.93:0,51,557	0/0:27,0:26:75.14:0,75,829	0/0:20,0:20:51.29:0,51,600	0/0:31,0:31:83.96:0,84,922	0/0:34,0:34:87.20:0,87,963	0/0:10,0:11:32.93:0,33,361
chr10	90323308	.	CT	C	1295.92	PASS	AB=0.751;AC=22;AF=0.393;AN=56;BaseQRankSum=-0.138;DP=541;FS=0.493;HRun=15;HaplotypeScore=69.0667;InbreedingCoeff=0.5053;MQ=65.94;MQ0=8;MQRankSum=3.972;QD=5.56;ReadPosRankSum=3.845;VQSLOD=2.5165;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:30:52.46:0,52,397	0/0:1,0:5:5.68:0,6,28	0/0:37,0:12:10.40:0,10,62	0/0:22,0:9:7.18:0,7,43	1/1:7,12:20:19.67:121,20,0	0/1:15,1:17:11.21:11,0,227	0/0:22,0:23:29.39:0,29,288	0/0:38,0:37:36.66:0,37,310	0/1:14,15:29:5.47:137,0,5	1/1:9,11:21:13.49:206,13,0	1/1:10,6:15:7.23:175,7,0	0/1:12,1:13:12.43:48,0,12	1/1:10,0:10:3.95:22,4,0	1/1:12,3:15:18.97:118,19,0	0/0:12,0:14:12.44:0,12,166	1/1:11,4:15:6.88:130,7,0	0/0:5,0:30:19.89:0,20,99	0/1:8,14:22:48.10:118,0,48	0/0:20,0:18:28.55:0,29,240	0/0:23,0:23:15.67:0,16,241	0/0:12,0:13:24.81:0,25,182	0/1:9,5:13:1.45:29,0,1	0/1:4,6:10:15.41:45,0,15	1/1:7,11:18:32.46:209,32,0	1/1:5,8:13:18.89:118,19,0	0/0:19,0:18:9.22:0,9,159	0/0:23,1:25:25.72:0,26,302	0/0:7,0:7:8.90:0,9,69
chr10	90326368	.	G	GT	6934.68	PASS	AB=0.739;AC=26;AF=0.464;AN=56;BaseQRankSum=-12.705;DP=626;FS=1.422;HRun=9;HaplotypeScore=62.9338;InbreedingCoeff=0.8445;MQ=69.94;MQ0=0;MQRankSum=0.515;QD=21.67;ReadPosRankSum=4.167;VQSLOD=5.5853;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,108,929	0/0:19,0:20:56.01:0,56,471	0/0:13,0:13:22.34:0,22,199	0/0:8,0:9:19.98:0,20,151	1/1:6,16:22:0.26:431,0,0	0/0:26,0:26:68.98:0,69,598	0/0:19,0:19:53.98:0,54,469	0/0:34,0:34:92.96:0,93,805	1/1:5,18:23:28.09:538,28,0	1/1:7,21:28:63.13:671,63,0	1/1:3,26:29:49.15:769,49,0	1/1:5,13:18:30.08:332,30,0	1/1:3,17:20:52.96:569,53,0	1/1:0,18:18:33.09:365,33,0	0/0:28,0:28:80.91:0,81,689	1/1:3,21:24:34.11:604,34,0	0/0:21,0:21:59.97:0,60,517	1/1:2,20:22:42.11:465,42,0	0/0:20,0:20:44.96:0,45,385	0/0:18,1:19:14.77:0,15,351	0/0:23,0:23:59.97:0,60,518	0/1:5,17:22:2.47:405,0,2	1/1:1,25:26:60.59:651,61,0	1/1:4,18:23:56.99:611,57,0	1/1:4,20:24:27.23:507,27,0	0/1:19,2:21:15.38:15,0,340	0/0:26,0:26:74.98:0,75,651	0/0:6,0:6:18:0,18,156
chr10	90327145	.	AGAC	A	1675.56	PASS	AB=0.974;AC=46;AF=0.920;AN=50;BaseQRankSum=-3.481;DP=146;FS=5.844;HRun=0;HaplotypeScore=38.1458;InbreedingCoeff=0.1700;MQ=65.99;MQ0=2;MQRankSum=-1.932;QD=13.40;ReadPosRankSum=-1.378;VQSLOD=2.0883;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:1:3.01:49,3,0	1/1:1,0:1:2.98:21,3,0	0/1:17,0:6:5.36:5,0,55	0/0:18,0:8:14.35:0,14,157	1/1:4,2:6:8.97:85,9,0	1/1:3,1:2:3.01:42,3,0	1/1:2,0:1:2.97:20,3,0	0/1:6,0:5:2.71:23,0,3	1/1:5,1:5:12:141,12,0	1/1:0,3:3:9.01:113,9,0	1/1:2,1:2:3.01:43,3,0	1/1:0,7:7:12.04:163,12,0	1/1:0,3:2:6.02:82,6,0	./.	1/1:0,8:7:3.01:40,3,0	1/1:1,0:1:3:28,3,0	1/1:5,0:4:10.50:85,10,0	1/1:3,1:3:9:117,9,0	1/1:9,2:8:17.36:145,17,0	1/1:5,1:5:13.65:112,14,0	1/1:0,0:1:1.82:5,2,0	1/1:0,4:4:3.01:40,3,0	1/1:0,1:1:3.01:40,3,0	./.	./.	1/1:9,0:7:20.99:228,21,0	1/1:2,0:1:2.99:24,3,0	1/1:8,2:10:11.71:136,12,0
chr10	90327812	.	T	TTGCTTCCTGCAAAAGAAAACAATTTA	68085.71	PASS	AB=0.667;AC=54;AF=0.964;AN=56;BaseQRankSum=0.068;DP=351;FS=8.772;HRun=0;HaplotypeScore=416.8069;InbreedingCoeff=-0.0452;MQ=57.42;MQ0=0;MQRankSum=-3.544;QD=193.98;ReadPosRankSum=3.294;VQSLOD=3.7049;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:57.11:3052,57,0	1/1:5,0:5:15.05:914,15,0	0/1:1,0:5:29.10:477,0,29	0/1:5,1:7:42.95:392,0,43	1/1:17,0:14:42.14:2968,42,0	1/1:14,0:14:42.13:3188,42,0	1/1:11,0:11:33.11:2145,33,0	1/1:20,0:20:60.20:3888,60,0	1/1:14,0:14:42.14:2531,42,0	1/1:15,0:15:42.14:3061,42,0	1/1:9,0:11:21.06:1423,21,0	1/1:13,0:13:39.13:3246,39,0	1/1:11,0:11:33.10:2173,33,0	1/1:14,0:14:42.14:3512,42,0	1/1:16,0:16:48.16:4172,48,0	1/1:13,0:13:39.13:3459,39,0	1/1:16,0:16:48.12:3046,48,0	1/1:13,0:13:33.58:2287,34,0	1/1:14,0:14:42.13:2623,42,0	1/1:17,0:20:51.18:4032,51,0	1/1:7,0:7:18.06:1387,18,0	1/1:6,0:6:15.05:1015,15,0	1/1:9,0:9:27.09:2026,27,0	1/1:13,0:13:39.09:1906,39,0	1/1:13,0:13:39.10:2753,39,0	1/1:11,0:17:44.48:3532,44,0	1/1:13,0:13:39.13:2767,39,0	1/1:1,0:1:3.01:109,3,0
chr10	90328728	.	AC	A	2499.74	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=3.523;DP=393;FS=0.976;HRun=9;HaplotypeScore=49.9186;InbreedingCoeff=0.8118;MQ=66.78;MQ0=2;MQRankSum=1.368;QD=12.75;ReadPosRankSum=3.586;VQSLOD=2.8421;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:57.13:0,57,630	0/0:5,0:5:6.21:0,6,88	0/1:19,0:10:5.67:6,0,67	0/1:23,0:17:5.75:6,0,212	1/1:4,7:10:2.93:145,3,0	0/0:12,0:12:33.04:0,33,348	0/0:10,0:10:24.07:0,24,277	0/0:31,0:30:45.07:0,45,470	1/1:1,20:21:45.02:411,45,0	1/1:1,12:13:35.92:312,36,0	1/1:2,9:11:26.85:218,27,0	1/1:2,10:12:21.01:192,21,0	1/1:0,9:9:21.01:192,21,0	1/1:3,8:11:21.01:192,21,0	0/0:7,0:10:17.49:0,17,132	1/1:0,17:17:45.02:412,45,0	0/0:13,0:13:27.02:0,27,277	1/1:4,14:18:30:274,30,0	0/0:10,0:10:21.06:0,21,235	0/0:8,0:8:18:0,18,192	0/0:11,0:9:18.02:0,18,185	1/1:1,4:5:9:82,9,0	1/1:3,2:5:6:55,6,0	1/1:3,7:10:12:110,12,0	1/1:2,8:10:12:110,12,0	0/0:15,0:15:36.10:0,36,408	0/0:25,0:25:66.12:0,66,724	0/0:13,0:13:24.03:0,24,248
chr10	90330268	.	AT	A	919.74	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.869;DP=561;FS=11.954;HRun=12;HaplotypeScore=62.1963;InbreedingCoeff=0.8724;MQ=67.05;MQ0=3;MQRankSum=0.176;QD=15.59;ReadPosRankSum=1.446;VQSLOD=3.9047;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:18.85:0,19,367	1/1:1,11:12:26.89:209,27,0	0/0:19,0:13:9.89:0,10,103	0/0:15,0:7:8.17:0,8,40	0/0:23,0:24:68.96:0,69,678	0/0:19,0:20:53.94:0,54,532	0/0:13,0:13:33.07:0,33,335	0/0:28,0:28:60.06:0,60,588	0/0:21,0:21:45.07:0,45,444	0/0:21,0:21:33.87:0,34,519	0/0:16,0:17:44.91:0,45,434	0/0:20,0:20:45.09:0,45,455	0/0:17,0:17:48.07:0,48,476	0/0:18,0:18:48.03:0,48,462	1/1:3,23:26:62.69:481,63,0	0/0:20,0:20:49.32:0,49,479	1/1:2,19:21:47.80:372,48,0	0/0:15,0:16:35.91:0,36,349	0/0:19,1:22:33.71:0,34,508	0/0:32,0:33:73.85:0,74,753	0/0:9,0:9:23.72:0,24,224	0/0:19,0:19:39.08:0,39,396	0/0:20,0:22:56.78:0,57,546	0/0:10,1:11:0.76:0,1,174	0/0:24,0:25:62.95:0,63,618	0/0:25,2:29:25.16:0,25,570	0/0:29,1:32:25.33:0,25,582	0/0:11,1:12:12.83:0,13,312
chr10	90330855	.	G	GT	2690.06	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-11.841;DP=613;FS=4.558;HRun=1;HaplotypeScore=57.1244;InbreedingCoeff=0.9998;MQ=90.60;MQ0=0;MQRankSum=-2.090;QD=38.99;ReadPosRankSum=4.424;VQSLOD=4.1917;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.16:0,57,723	1/1:2,12:14:33.06:495,33,0	0/0:29,0:28:75.24:0,75,956	0/0:21,0:21:59.94:0,60,703	0/0:28,0:28:84.26:0,84,1075	0/0:25,0:25:72.23:0,72,933	0/0:16,0:16:45.15:0,45,584	0/0:35,0:35:96.31:0,96,1246	0/0:26,0:26:72.22:0,72,921	0/0:29,0:29:87.28:0,87,1120	0/0:22,0:22:66.20:0,66,841	0/0:15,0:15:45.12:0,45,557	0/0:17,0:17:48.14:0,48,608	0/0:18,0:18:51.15:0,51,638	1/1:0,31:31:90.30:1349,90,0	0/0:31,0:31:93.29:0,93,1193	1/1:0,24:24:66.22:989,66,0	0/0:18,0:18:54.15:0,54,683	0/0:21,0:21:63.19:0,63,804	0/0:25,0:25:75.24:0,75,974	0/0:27,0:27:75.20:0,75,929	0/0:20,0:20:60.17:0,60,750	0/0:19,0:19:57.19:0,57,740	0/0:14,0:14:39.13:0,39,506	0/0:12,0:12:36.12:0,36,467	0/0:21,0:21:60.18:0,60,762	0/0:19,0:19:54.18:0,54,701	0/0:16,0:16:42.14:0,42,545
chr10	90333533	.	TTTGCTTGCTTGCTTGC	T	4253.73	PASS	AB=0.966;AC=17;AF=0.327;AN=52;BaseQRankSum=-1.407;DP=519;FS=1.168;HRun=0;HaplotypeScore=245.7041;InbreedingCoeff=0.0513;MQ=52.16;MQ0=9;MQRankSum=-0.582;QD=18.18;ReadPosRankSum=-4.597;VQSLOD=3.0588;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:23.14:0,23,419	0/0:6,0:6:9.03:0,9,354	./.	./.	1/1:10,7:16:8.99:181,9,0	0/0:12,0:12:18.06:0,18,625	0/0:23,0:22:27.09:0,27,418	0/0:24,0:12:2.99:0,3,24	0/1:10,0:10:31.19:245,0,31	0/1:19,0:17:33.89:34,0,81	1/1:3,5:8:6.02:140,6,0	0/1:22,0:22:36.06:570,0,36	1/1:18,0:18:6.99:464,7,0	0/1:19,0:19:99:467,0,109	0/0:17,0:17:27.07:0,27,1069	0/1:17,0:17:99:377,0,143	0/0:45,0:45:75.26:0,75,2843	0/1:25,0:25:56.43:491,0,56	0/0:23,0:18:9.03:0,9,256	0/0:7,0:7:9.03:0,9,272	0/0:23,0:23:42.13:0,42,1328	0/1:10,8:18:66.50:68,0,66	0/1:12,0:10:56.68:57,0,79	0/1:38,0:38:84.13:837,0,84	1/1:11,0:11:0.55:323,1,0	0/0:24,0:23:27.07:0,27,602	0/0:26,0:25:39.13:0,39,1627	0/0:11,0:11:6.02:0,6,194
chr10	90334112	.	A	ATG	399.27	PASS	AC=8;AF=0.222;AN=36;BaseQRankSum=5.825;DP=213;FS=1.377;HRun=0;HaplotypeScore=64.1835;InbreedingCoeff=0.6913;MQ=57.90;MQ0=4;MQRankSum=-1.700;QD=12.48;ReadPosRankSum=2.059;VQSLOD=3.2793;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:24.04:0,24,321	./.	0/0:8,0:2:6.01:0,6,57	0/0:11,0:5:5.90:0,6,42	./.	0/0:10,0:10:24.06:0,24,329	0/0:10,0:10:26.74:0,27,356	0/0:25,0:25:72.20:0,72,1002	1/1:1,13:14:9.03:161,9,0	1/1:0,5:5:12.04:225,12,0	./.	./.	1/1:1,5:6:2.98:57,3,0	./.	0/0:7,0:7:2.22:0,2,21	./.	1/1:7,0:7:10.86:79,11,0	./.	0/0:8,0:6:18:0,18,228	0/0:4,0:4:12.03:0,12,162	0/0:6,0:6:18.03:0,18,229	./.	0/0:0,2:2:0:0,0,0	./.	./.	0/0:10,0:10:30.09:0,30,440	0/0:16,0:16:42.13:0,42,619	0/0:9,0:9:1.86:0,2,341
chr10	90334132	.	ATG	A	31.68	PASS	AB=0.764;AC=7;AF=0.194;AN=36;BaseQRankSum=2.911;DP=157;FS=2.580;HRun=0;HaplotypeScore=56.3894;InbreedingCoeff=0.5538;MQ=50.23;MQ0=4;MQRankSum=-2.680;QD=1.51;ReadPosRankSum=1.244;VQSLOD=1.3411;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:18.04:0,18,269	./.	./.	0/0:10,0:2:3.01:0,3,36	0/0:2,4:6:0:0,0,0	0/0:8,0:8:21.07:0,21,365	0/0:4,0:4:5.99:0,6,100	0/0:26,0:26:72.18:0,72,1175	1/1:1,3:4:3.01:40,3,0	1/1:1,2:3:6.02:82,6,0	./.	./.	0/1:2,3:5:0:0,0,0	./.	0/1:7,0:7:0.03:0,0,0	./.	0/0:7,0:6:12.04:0,12,199	./.	0/0:6,0:3:9.02:0,9,131	0/0:4,0:4:9.03:0,9,154	0/0:3,0:3:9.03:0,9,153	./.	0/1:1,1:2:0:0,0,0	./.	./.	0/0:6,0:6:15.04:0,15,229	0/0:13,0:13:39.10:0,39,613	0/0:7,0:7:15.05:0,15,260
chr10	90334185	.	T	TG	60.20	PASS	AB=0.815;AC=8;AF=0.250;AN=32;BaseQRankSum=3.162;DP=92;FS=2.428;HRun=0;HaplotypeScore=65.4225;InbreedingCoeff=0.3310;MQ=35.26;MQ0=9;MQRankSum=-2.821;QD=1.72;ReadPosRankSum=0.142;VQSLOD=1.3868;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:6:8.97:0,9,84	./.	./.	./.	0/1:9,1:9:0.33:0,0,0	0/0:6,0:5:3:0,3,25	./.	0/0:16,0:12:33.10:0,33,438	./.	1/1:2,1:3:9.03:116,9,0	0/1:3,2:5:0:0,0,0	./.	./.	./.	0/1:7,0:7:0.41:0,0,1	0/1:1,1:2:0:0,0,0	0/0:7,0:5:2.91:0,3,20	0/1:2,0:2:27.90:28,0,34	0/0:2,0:2:6.02:0,6,78	0/0:1,0:1:3.01:0,3,42	./.	./.	./.	./.	0/1:2,4:6:0.01:0,0,0	0/0:1,0:1:0:0,0,0	0/0:6,0:6:18.04:0,18,220	0/0:7,0:6:5.81:0,6,54
chr10	90334187	.	T	TG	63	PASS	AB=0.766;AC=8;AF=0.250;AN=32;BaseQRankSum=3.006;DP=93;FS=2.268;HRun=0;HaplotypeScore=67.2971;InbreedingCoeff=0.3447;MQ=34.77;MQ0=9;MQRankSum=-2.510;QD=1.75;ReadPosRankSum=0.689;VQSLOD=2.0076;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:6:8.97:0,9,84	./.	./.	./.	0/1:1,8:9:0.33:0,0,0	0/0:6,0:5:3:0,3,25	./.	0/0:17,0:12:35.98:0,36,453	./.	1/1:3,1:4:8.91:105,9,0	0/1:2,3:5:0:0,0,0	./.	./.	./.	0/1:7,0:7:0.41:0,0,1	0/1:2,0:2:0:0,0,0	0/0:6,0:4:0.83:0,1,2	0/1:1,1:2:33.64:42,0,34	0/0:2,0:2:6.02:0,6,83	0/0:1,0:1:3.01:0,3,42	./.	./.	./.	./.	0/1:5,2:7:0.01:0,0,0	0/0:1,0:1:0:0,0,0	0/0:6,0:6:18.04:0,18,220	0/0:7,0:6:6.02:0,6,77
chr10	90334203	.	TAGAG	T	397.64	PASS	AB=0.800;AC=15;AF=0.417;AN=36;BaseQRankSum=-2.501;DP=127;FS=1.623;HRun=0;HaplotypeScore=62.2234;InbreedingCoeff=0.4899;MQ=40.08;MQ0=14;MQRankSum=1.915;QD=7.10;ReadPosRankSum=0.638;VQSLOD=2.0430;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:11:9.03:0,9,146	./.	0/0:5,0:2:6.02:0,6,81	0/0:7,0:2:3.48:0,3,30	1/1:11,0:11:0.26:1,0,0	./.	1/1:1,0:1:3.01:38,3,0	1/1:5,7:10:18.49:213,18,0	./.	0/0:6,0:7:5.36:0,5,40	0/1:6,0:8:0:0,0,0	./.	./.	./.	0/0:5,0:5:0:0,0,0	0/0:1,0:2:0:0,0,0	0/0:6,0:4:0:0,0,1	0/0:2,0:2:5.58:0,6,27	1/1:4,3:5:8.92:73,9,0	1/1:1,0:2:5.98:58,6,0	./.	./.	./.	./.	0/0:7,0:8:3.44:0,3,21	0/0:2,0:2:2.70:0,3,6	1/1:7,0:6:6.02:90,6,0	1/1:1,0:5:3.01:39,3,0
chr10	90334240	.	GGAGAGAGAGAGA	G	2018.75	PASS	AC=14;AF=0.318;AN=44;BaseQRankSum=7.044;DP=237;FS=11.870;HRun=0;HaplotypeScore=108.4269;InbreedingCoeff=0.8395;MQ=79.94;MQ0=12;MQRankSum=-5.963;QD=42.95;ReadPosRankSum=1.053;VQSLOD=2.7966;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:9:24.08:0,24,986	./.	0/0:27,0:16:39.44:0,39,760	0/0:47,0:23:38.40:0,38,639	1/1:8,7:14:31.16:665,31,0	0/0:8,0:6:11.99:0,12,244	0/0:4,0:4:12.04:0,12,299	0/0:17,0:15:45.11:0,45,1278	./.	1/1:3,1:3:3.01:115,3,0	1/1:6,3:9:19.31:430,19,0	1/1:0,1:1:3.01:77,3,0	./.	./.	0/0:3,0:11:12.50:0,12,311	./.	0/0:7,0:14:17.29:0,17,325	0/0:1,0:1:3.01:0,3,39	0/0:4,0:4:12.04:0,12,338	0/0:9,0:9:27.09:0,27,789	0/0:6,0:6:15.05:0,15,554	1/1:2,1:3:8.98:172,9,0	1/1:3,4:6:18.01:390,18,0	./.	1/1:5,3:8:15.05:335,15,0	0/0:4,0:4:12.04:0,12,425	0/0:12,0:12:33.58:0,34,1168	0/0:11,0:11:21.07:0,21,685
chr10	90334245	.	GAGA	G	269.85	PASS	AB=0.750;AC=13;AF=0.310;AN=42;BaseQRankSum=7.830;DP=237;FS=15.143;HRun=0;HaplotypeScore=84.5146;InbreedingCoeff=0.7627;MQ=91.22;MQ0=11;MQRankSum=-6.861;QD=6.75;ReadPosRankSum=3.238;VQSLOD=1.3803;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:11:27.09:0,27,593	./.	0/0:30,0:19:49.77:0,50,787	0/0:51,0:27:51.15:0,51,699	1/1:8,5:12:25.76:133,26,0	0/0:8,0:6:11.97:0,12,228	0/0:4,0:4:12.04:0,12,290	0/0:19,0:18:53.36:0,53,1000	./.	1/1:2,0:1:2.99:23,3,0	1/1:4,3:7:17.11:86,17,0	1/1:1,0:1:2.92:17,3,0	./.	./.	0/0:11,0:11:11.83:0,12,179	./.	0/0:14,0:13:14.08:0,14,210	./.	0/0:4,0:4:12.04:0,12,250	0/0:9,0:9:27.09:0,27,647	0/0:6,0:6:15.05:0,15,369	0/1:2,1:3:11.18:16,0,11	1/1:6,1:6:17.38:99,17,0	./.	1/1:6,1:7:9.64:52,10,0	0/0:4,0:4:12.04:0,12,296	0/0:12,0:12:32.67:0,33,762	0/0:11,0:11:21.07:0,21,510
chr10	90334296	.	TA	T	1294.82	PASS	AB=0.796;AC=14;AF=0.259;AN=54;BaseQRankSum=5.820;DP=337;FS=32.947;HRun=5;HaplotypeScore=144.5165;InbreedingCoeff=0.3223;MQ=75.54;MQ0=0;MQRankSum=-10.229;QD=11.26;ReadPosRankSum=-0.228;VQSLOD=0.2987;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.12:0,48,620	./.	0/0:13,0:13:27.08:0,27,355	0/0:8,0:8:15.05:0,15,204	0/1:11,8:19:8.52:205,0,9	0/0:6,0:6:18.06:0,18,246	0/0:15,0:15:45.15:0,45,615	0/0:22,0:22:63.20:0,63,847	0/1:8,1:9:17.42:30,0,17	1/1:5,8:12:0.64:239,1,0	1/1:3,5:8:6.38:155,6,0	0/1:9,2:11:31.89:51,0,32	0/1:6,1:7:21.70:27,0,22	0/1:6,2:8:25.99:59,0,26	0/0:17,0:17:36.07:0,36,464	0/0:7,0:7:14.46:0,14,63	0/0:17,0:17:33.09:0,33,433	0/0:13,0:13:18.36:0,18,109	0/0:8,0:8:24.08:0,24,328	0/0:18,0:18:51.14:0,51,665	0/0:11,0:11:33.11:0,33,451	1/1:6,7:13:8.48:224,8,0	1/1:5,7:12:10.15:223,10,0	0/0:8,0:8:14.62:0,15,89	0/1:7,8:15:21.16:243,0,21	0/0:11,0:11:33.11:0,33,450	0/0:17,0:17:51.17:0,51,695	0/0:13,0:13:39.13:0,39,533
chr10	90334627	.	TACAG	T	8643.91	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=14.361;DP=501;FS=0.363;HRun=0;HaplotypeScore=98.2380;InbreedingCoeff=0.9808;MQ=78.28;MQ0=0;MQRankSum=-11.367;QD=47.76;ReadPosRankSum=0.755;VQSLOD=5.3367;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,2866	0/0:2,0:2:6.02:0,6,174	0/0:15,0:14:42.14:0,42,1036	0/0:23,0:23:66.23:0,66,1686	1/1:0,15:15:30.10:600,30,0	0/0:21,0:21:63.20:0,63,1749	0/0:19,0:19:57.18:0,57,1563	0/0:23,0:23:69.20:0,69,1817	1/1:0,15:15:39.13:815,39,0	1/1:0,15:15:42.12:826,42,0	1/1:0,7:7:14.97:229,15,0	1/1:0,20:20:42.14:878,42,0	1/1:0,14:14:33.58:690,34,0	1/1:0,13:13:36.12:753,36,0	0/0:22,0:22:66.23:0,66,1911	1/1:0,18:18:45.15:941,45,0	0/0:24,0:24:72.22:0,72,1980	1/1:0,13:13:33.11:691,33,0	0/0:15,0:15:44.94:0,45,1214	0/0:21,0:21:63.22:0,63,1825	0/0:46,0:46:99:0,135,3896	1/1:0,12:12:30.03:541,30,0	1/1:0,6:6:15.01:268,15,0	1/1:0,20:20:42.14:852,42,0	1/1:0,13:13:27.09:558,27,0	0/0:16,0:16:45.10:0,45,1236	0/0:20,0:20:60.21:0,60,1699	0/0:20,0:20:57.20:0,57,1650
chr10	90335320	.	GGA	G	1165.21	PASS	AB=0.805;AC=22;AF=0.407;AN=54;BaseQRankSum=6.584;DP=518;FS=39.067;HRun=0;HaplotypeScore=144.3760;InbreedingCoeff=-0.3058;MQ=29.29;MQ0=22;MQRankSum=-4.080;QD=3.69;ReadPosRankSum=-0.939;VQSLOD=0.9789;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:6:8.86:0,9,109	./.	0/0:72,1:15:28.61:0,29,627	0/0:72,1:8:15.05:0,15,271	0/1:19,6:31:41.40:41,0,82	0/1:11,4:19:99:132,0,194	0/0:9,1:12:7.95:0,8,404	0/0:16,0:16:30.79:0,31,634	0/1:2,4:6:23.01:23,0,49	0/1:15,6:21:99:100,0,357	0/1:13,9:24:39.83:40,0,41	0/1:6,8:14:7.34:93,0,7	1/1:3,1:4:1.43:24,1,0	1/1:3,1:4:4.98:28,5,0	1/1:4,3:8:10.19:69,10,0	0/1:9,9:21:95.89:96,0,172	0/0:1,1:3:2.50:0,2,9	0/1:3,3:6:55.11:59,0,55	0/1:9,0:10:2.13:2,0,351	0/1:11,4:19:99:118,0,311	0/0:5,0:5:9.03:0,9,158	0/1:11,2:14:28.90:35,0,29	0/1:10,4:15:13.79:14,0,27	0/0:3,2:4:0:0,0,0	0/1:13,4:18:20.76:21,0,106	0/1:20,8:34:99:270,0,797	0/1:10,4:15:99:129,0,321	0/1:3,0:7:25.01:25,0,153
chr10	90335330	.	G	GA	5246.24	PASS	AB=0.742;AC=36;AF=0.643;AN=56;BaseQRankSum=8.459;DP=592;FS=78.619;HRun=1;HaplotypeScore=150.0451;InbreedingCoeff=0.0294;MQ=29.29;MQ0=32;MQRankSum=-3.805;QD=12.86;ReadPosRankSum=0.951;VQSLOD=1.5010;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,3:8:12.23:12,0,70	0/0:2,0:1:1.82:0,2,5	0/0:84,0:15:38.03:0,38,461	0/0:88,0:9:14.99:0,15,150	1/1:14,17:32:47.98:540,48,0	0/1:11,11:21:99:261,0,169	0/1:8,4:13:53.01:53,0,253	0/1:20,4:23:99:138,0,514	1/1:6,1:7:7.53:72,8,0	1/1:10,16:24:49.61:612,50,0	1/1:15,12:28:33.18:430,33,0	1/1:10,4:14:17.31:124,17,0	1/1:5,1:6:6.47:34,6,0	1/1:2,3:5:5.44:24,5,0	1/1:7,3:9:17.74:217,18,0	1/1:13,9:23:40.55:477,41,0	1/1:6,1:6:11.99:111,12,0	0/1:4,2:7:24.63:101,0,25	0/1:10,3:11:99:188,0,174	0/1:12,10:23:99:194,0,189	0/0:8,1:8:8.57:0,9,120	1/1:5,10:15:12:220,12,0	0/1:8,7:15:22.51:177,0,23	0/1:2,3:5:0:0,0,0	1/1:4,15:21:37.97:441,38,0	0/1:15,16:32:99:506,0,428	0/1:11,5:16:99:157,0,215	0/1:5,4:8:95.69:156,0,96
chr10	90335331	.	GA	G	502.63	PASS	AB=0.984;AC=20;AF=0.357;AN=56;BaseQRankSum=3.271;DP=605;FS=2.417;HRun=2;HaplotypeScore=165.9847;InbreedingCoeff=-0.1840;MQ=29.20;MQ0=34;MQRankSum=-3.322;QD=1.42;ReadPosRankSum=1.043;VQSLOD=-0.5115;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:8:8.69:0,9,78	0/0:3,0:1:3.01:0,3,41	0/0:86,0:15:36.89:0,37,453	0/1:87,3:9:64.22:102,0,64	0/0:34,0:32:35.90:0,36,284	0/1:22,0:21:65.55:66,0,208	0/1:13,0:13:6.74:7,0,293	0/0:25,0:24:47.33:0,47,683	0/1:9,1:8:1.37:1,0,16	0/1:26,0:24:14.44:14,0,243	0/0:30,0:28:25.98:0,26,188	0/1:16,0:15:11.28:11,0,52	1/1:7,0:7:3.25:27,3,0	1/1:6,0:5:4.12:13,4,0	0/1:14,0:9:6.18:6,0,68	0/1:27,0:26:32.91:33,0,77	0/1:8,0:6:6.57:7,0,11	0/1:7,0:7:0.88:1,0,75	0/1:14,0:11:8.22:8,0,226	0/1:24,0:23:76.99:77,0,222	0/0:9,0:8:11.61:0,12,126	0/0:17,0:15:25.24:0,25,209	0/0:16,0:15:6.90:0,7,185	0/1:6,1:5:0:0,0,0	0/0:22,0:21:20.95:0,21,242	0/1:36,0:33:99:154,0,556	0/1:16,0:16:99:119,0,237	0/1:10,0:9:0.99:1,0,194
chr10	90335768	.	GTAT	G	3526.15	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.639;DP=701;FS=2.182;HRun=0;HaplotypeScore=102.6571;InbreedingCoeff=0.9998;MQ=79.64;MQ0=0;MQRankSum=-4.707;QD=44.63;ReadPosRankSum=3.971;VQSLOD=5.5418;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.23:0,75,1695	1/1:0,12:12:36.12:633,36,0	0/0:21,0:22:56.95:0,57,1192	0/0:12,0:12:30.10:0,30,635	0/0:41,0:41:99:0,117,2687	0/0:35,0:35:99:0,105,2446	0/0:16,0:16:48.16:0,48,1093	0/0:32,0:32:87.30:0,87,2004	0/0:30,0:30:90.31:0,90,2080	0/0:39,0:39:99:0,117,2711	0/0:19,0:19:54.19:0,54,1238	0/0:24,0:24:69.24:0,69,1607	0/0:16,0:16:48.16:0,48,1075	0/0:19,0:19:54.19:0,54,1265	1/1:0,36:36:96.33:1676,96,0	0/0:27,0:27:78.27:0,78,1799	1/1:2,29:31:69.24:1217,69,0	0/0:16,0:16:48.16:0,48,1135	0/0:23,0:23:69.23:0,69,1557	0/0:31,0:31:90.31:0,90,2040	0/0:17,0:17:51.15:0,51,1158	0/0:29,0:29:84.27:0,84,1913	0/0:26,0:26:78.27:0,78,1804	0/0:21,0:21:60.19:0,60,1317	0/0:26,0:26:78.27:0,78,1820	0/0:35,0:35:99:0,102,2405	0/0:23,0:23:69.24:0,69,1600	0/0:18,0:18:54.19:0,54,1250
chr10	90336145	.	A	AT	6583.35	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-12.144;DP=496;FS=1.185;HRun=8;HaplotypeScore=67.3481;InbreedingCoeff=0.9699;MQ=73.27;MQ0=0;MQRankSum=1.382;QD=29.13;ReadPosRankSum=2.530;VQSLOD=5.2064;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:81.02:0,81,737	0/0:4,0:4:12.01:0,12,110	0/0:6,0:7:7.23:0,7,58	0/0:12,0:12:6.76:0,7,172	1/1:4,27:31:81.24:931,81,0	0/0:13,0:13:30.01:0,30,274	0/0:18,0:18:48.02:0,48,439	0/0:34,0:34:63:0,63,573	1/1:1,12:13:30.09:346,30,0	1/1:1,23:24:66.16:739,66,0	1/1:4,11:15:33.10:380,33,0	1/1:2,22:24:59.74:692,60,0	1/1:2,10:12:27.08:312,27,0	1/1:2,16:18:51.15:586,51,0	0/0:14,0:14:30.01:0,30,274	1/1:3,9:12:24.07:277,24,0	0/0:13,0:13:29.80:0,30,274	1/1:5,14:19:51.10:554,51,0	0/0:23,0:23:51.01:0,51,463	0/0:28,0:28:81.02:0,81,735	0/0:12,0:12:36.02:0,36,330	1/1:1,19:20:57.17:658,57,0	1/1:1,13:14:36.11:415,36,0	1/1:1,6:7:18.05:208,18,0	1/1:0,17:17:42.12:485,42,0	0/0:30,0:30:78.04:0,78,714	0/0:19,0:19:33.46:0,33,471	0/0:12,0:12:33.01:0,33,302
chr10	90336161	.	C	CTTAAATGTCTT	4404.99	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=2.691;DP=492;FS=0.693;HRun=0;HaplotypeScore=178.3923;InbreedingCoeff=0.8811;MQ=74.74;MQ0=1;MQRankSum=-8.713;QD=91.77;ReadPosRankSum=0.671;VQSLOD=4.9794;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:99:0,101,3411	1/1:2,3:5:15.02:718,15,0	0/1:14,0:13:2.78:3,0,641	0/0:11,0:11:27.09:0,27,815	0/0:27,0:27:68.90:0,69,2247	0/0:12,0:12:36.12:0,36,1221	0/0:17,0:17:48.16:0,48,1729	0/0:33,0:33:84.25:0,84,2593	0/0:10,0:10:27.09:0,27,911	0/0:27,0:27:75.25:0,75,2525	0/0:12,0:12:33.10:0,33,1062	0/0:23,0:23:63.22:0,63,2244	0/0:10,0:10:27.09:0,27,979	0/0:19,0:19:51.17:0,51,1850	1/1:9,6:15:36.12:1738,36,0	0/0:14,0:14:39.12:0,39,1275	1/1:2,11:13:39.13:1946,39,0	0/0:19,0:19:54.19:0,54,1875	0/0:18,0:18:54.19:0,54,1799	0/0:25,0:25:72.25:0,72,2571	0/0:13,0:13:39.13:0,39,1341	0/0:20,0:20:60.21:0,60,2056	0/0:13,0:13:39.13:0,39,1318	0/0:9,0:9:27.09:0,27,874	0/0:13,0:13:39.12:0,39,1331	0/0:30,0:30:87.30:0,87,2984	0/0:22,0:22:63.22:0,63,2202	0/0:11,0:11:33.09:0,33,1003
chr10	90336179	.	A	AT	514.10	PASS	AB=0.933;AC=7;AF=0.125;AN=56;BaseQRankSum=6.024;DP=465;FS=4.217;HRun=9;HaplotypeScore=79.0246;InbreedingCoeff=0.7537;MQ=70.57;MQ0=3;MQRankSum=-6.525;QD=11.42;ReadPosRankSum=0.307;VQSLOD=3.0965;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:86.83:0,87,755	1/1:0,4:4:12.03:133,12,0	0/0:13,0:11:8.45:0,8,74	0/0:12,0:9:8.94:0,9,69	0/0:19,0:20:44.98:0,45,390	0/0:11,0:11:29.99:0,30,260	0/1:13,1:14:6.23:6,0,176	0/0:23,0:23:50.97:0,51,443	0/0:11,0:11:23.96:0,24,202	0/0:25,0:25:50.96:0,51,443	0/0:9,0:9:26.98:0,27,231	0/0:20,0:20:41.96:0,42,361	0/0:13,0:13:35.99:0,36,312	0/0:20,0:20:55.06:0,55,455	1/1:6,8:14:5.17:243,5,0	0/0:16,0:16:35.97:0,36,309	1/1:4,9:13:24.06:265,24,0	0/0:22,0:22:56.97:0,57,495	0/0:17,0:16:35.98:0,36,310	0/0:21,0:22:46.99:0,47,393	0/0:11,0:11:26.99:0,27,234	0/0:15,0:15:35.89:0,36,303	0/0:17,1:18:8.78:0,9,302	0/0:11,0:10:23.98:0,24,205	0/0:14,0:14:32.97:0,33,281	0/0:27,0:27:62.94:0,63,547	0/0:20,0:20:53.97:0,54,466	0/0:8,0:8:17.98:0,18,155
chr10	90336255	.	C	CCCAA	2176.86	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.858;DP=465;FS=15.711;HRun=0;HaplotypeScore=77.8697;InbreedingCoeff=0.9317;MQ=57.24;MQ0=10;MQRankSum=-8.447;QD=54.42;ReadPosRankSum=-1.561;VQSLOD=3.0678;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:73.32:0,73,1627	1/1:1,5:6:9.03:235,9,0	0/0:6,0:3:8.06:0,8,106	0/0:13,0:8:21.07:0,21,371	0/0:15,0:14:42.14:0,42,763	0/0:16,0:16:48.16:0,48,862	0/0:17,0:17:42.14:0,42,764	0/0:18,0:17:42.04:0,42,673	0/0:15,0:15:45.15:0,45,808	0/0:20,0:20:57.16:0,57,980	0/0:8,0:8:18.06:0,18,327	0/0:19,0:19:57.20:0,57,1027	0/0:14,0:14:39.12:0,39,673	0/0:23,0:23:60.21:0,60,1091	1/1:3,15:18:10.02:1190,10,0	0/0:14,0:13:36.11:0,36,616	1/1:5,11:16:36.09:884,36,0	0/0:23,0:23:66.18:0,66,1166	0/0:16,0:13:27.98:0,28,493	0/0:13,0:13:36.12:0,36,655	0/0:24,0:23:66.23:0,66,1180	0/0:11,0:11:33.11:0,33,600	0/0:17,0:17:45.15:0,45,809	0/0:14,0:13:36.12:0,36,645	0/0:18,0:18:51.17:0,51,918	0/0:21,0:21:60.20:0,60,1045	0/0:19,0:18:57.20:0,57,1036	0/0:14,0:14:36.12:0,36,629
chr10	90339071	.	TA	T	804.53	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=8.499;DP=308;FS=1.319;HRun=1;HaplotypeScore=50.1163;InbreedingCoeff=0.6240;MQ=68.20;MQ0=1;MQRankSum=-0.141;QD=14.37;ReadPosRankSum=3.267;VQSLOD=3.1319;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.24:0,75,1174	1/1:0,3:7:14.67:103,15,0	0/1:8,0:6:28.09:38,0,28	0/0:6,0:6:18.06:0,18,248	0/0:11,0:10:30.10:0,30,467	0/0:14,0:14:42.12:0,42,625	0/0:11,0:11:33.11:0,33,522	0/0:28,0:26:77.26:0,77,1110	0/0:4,0:4:9.03:0,9,143	0/0:14,0:14:42.14:0,42,665	0/0:9,0:9:27.09:0,27,429	0/0:5,0:5:12.04:0,12,192	0/0:1,0:1:3.01:0,3,48	0/0:3,0:3:6.02:0,6,95	1/1:6,6:12:14.99:229,15,0	0/0:9,0:9:18.05:0,18,264	1/1:8,21:29:70.09:577,70,0	0/0:13,0:13:26.63:0,27,455	0/0:25,0:25:75.23:0,75,1108	0/0:7,0:7:21.03:0,21,281	0/0:8,0:8:21.07:0,21,332	0/0:3,0:3:6.02:0,6,82	0/0:1,0:1:3:0,3,25	0/0:1,0:1:3.01:0,3,48	0/0:8,0:8:12.04:0,12,192	0/0:17,0:17:51.17:0,51,815	0/0:16,0:16:48.10:0,48,659	0/0:13,0:13:39.13:0,39,623
chr10	90339073	.	TTA	T	943.86	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=7.817;DP=305;FS=0.589;HRun=0;HaplotypeScore=55.9756;InbreedingCoeff=0.6347;MQ=68.02;MQ0=1;MQRankSum=-1.092;QD=15.73;ReadPosRankSum=1.391;VQSLOD=3.1961;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.07:0,75,1229	1/1:4,3:7:14.91:122,15,0	1/1:7,1:6:0.81:58,1,0	0/0:6,0:6:14.79:0,15,149	0/0:11,0:10:28.19:0,28,300	0/0:14,0:14:42.09:0,42,620	0/0:11,0:11:33.07:0,33,489	0/0:25,0:23:69.17:0,69,1005	0/0:4,0:4:9.03:0,9,112	0/0:14,0:14:39.10:0,39,504	0/0:9,0:9:26.97:0,27,306	0/0:5,0:5:12.04:0,12,154	0/0:1,0:1:3.01:0,3,40	0/0:3,0:3:6.01:0,6,68	1/1:6,6:12:19.76:260,20,0	0/0:9,0:9:8.18:0,8,184	1/1:9,20:29:45.18:638,45,0	0/0:15,0:15:3.01:0,3,328	0/0:25,0:25:42.05:0,42,804	0/0:7,0:7:18.02:0,18,223	0/0:8,0:8:20.90:0,21,325	0/1:3,0:3:10.21:10,0,19	1/1:1,0:1:2.50:9,2,0	0/0:1,0:1:3.01:0,3,40	0/0:8,0:8:12.03:0,12,146	0/0:17,0:17:51.10:0,51,725	0/0:13,0:13:39.05:0,39,552	0/0:14,0:14:41.97:0,42,687
chr10	90339077	.	T	TA	2314.73	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-7.125;DP=313;FS=10.738;HRun=0;HaplotypeScore=47.1582;InbreedingCoeff=0.8826;MQ=67.50;MQ0=2;MQRankSum=2.557;QD=24.89;ReadPosRankSum=1.187;VQSLOD=4.1050;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.17:0,75,1004	0/0:7,0:7:14.58:0,15,86	0/0:8,0:6:5.96:0,6,33	0/0:6,0:6:17.78:0,18,138	1/1:0,11:10:24.85:297,25,0	0/0:13,0:13:37.36:0,37,487	0/0:10,0:9:27.09:0,27,375	0/0:29,0:27:75.11:0,75,931	1/1:0,5:5:9.03:128,9,0	1/1:0,12:12:36.10:474,36,0	1/1:0,9:9:21.07:300,21,0	1/1:1,7:8:15.04:205,15,0	1/1:0,3:3:5.95:61,6,0	1/1:0,6:6:9.03:119,9,0	0/0:11,0:11:32.30:0,32,230	1/1:0,10:10:18.06:248,18,0	0/0:30,0:30:81.03:0,81,492	1/1:2,12:15:20.39:407,20,0	0/0:22,0:22:53.48:0,53,707	0/0:7,0:7:18.05:0,18,233	0/0:8,0:8:21:0,21,262	1/1:2,0:2:5.93:51,6,0	1/1:0,3:3:5.85:68,6,0	1/1:0,1:1:3.01:43,3,0	1/1:0,8:8:9.03:129,9,0	0/0:17,0:17:48.10:0,48,590	0/0:12,0:12:36.10:0,36,471	0/0:14,0:14:42.05:0,42,529
chr10	90339275	.	GC	G	226.10	PASS	AB=0.848;AC=4;AF=0.071;AN=56;BaseQRankSum=3.183;DP=460;FS=0.000;HRun=1;HaplotypeScore=84.4398;InbreedingCoeff=0.5045;MQ=64.68;MQ0=4;MQRankSum=-3.415;QD=5.65;ReadPosRankSum=-0.560;VQSLOD=0.0686;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,1962	0/1:4,1:5:10.30:31,0,10	0/0:16,0:14:42.12:0,42,619	0/0:17,1:16:30.74:0,31,546	0/0:17,0:17:48.12:0,48,690	0/0:15,0:15:42.12:0,42,622	0/0:15,0:15:45.09:0,45,596	0/0:29,0:28:84.19:0,84,1177	0/0:12,0:12:30.56:0,31,450	0/0:15,0:15:42.13:0,42,618	0/0:19,0:19:54.02:0,54,735	0/0:8,0:8:24.05:0,24,329	0/0:9,0:9:24.07:0,24,357	0/0:5,0:5:15.04:0,15,209	1/1:15,1:16:2.66:155,3,0	0/0:15,0:15:45.04:0,45,631	0/1:16,3:18:1.62:143,0,2	0/0:13,0:12:36.11:0,36,541	0/0:21,0:20:60.09:0,60,858	0/0:18,0:18:54.17:0,54,831	0/0:22,0:22:66.19:0,66,995	0/0:9,0:9:27.04:0,27,372	0/0:7,0:7:18.06:0,18,284	0/0:22,0:22:53.72:0,54,819	0/0:6,0:6:18.05:0,18,258	0/0:23,0:23:69.02:0,69,1042	0/0:32,0:32:96.27:0,96,1404	0/0:11,0:11:33.11:0,33,523
chr10	90339297	.	GTTT	G	3921.50	PASS	AB=0.977;AC=26;AF=0.464;AN=56;BaseQRankSum=12.401;DP=451;FS=18.126;HRun=3;HaplotypeScore=93.8819;InbreedingCoeff=0.8479;MQ=53.87;MQ0=12;MQRankSum=-1.697;QD=22.03;ReadPosRankSum=-0.981;VQSLOD=-0.3588;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,2828	0/0:6,0:6:15.05:0,15,230	0/0:13,0:9:23.85:0,24,316	0/0:15,0:11:30.10:0,30,619	1/1:8,6:14:40.98:405,41,0	0/0:17,0:17:51.16:0,51,1076	0/0:14,0:14:42.12:0,42,841	0/0:32,0:30:87.16:0,87,1664	1/1:14,0:14:38.96:356,39,0	1/1:8,5:13:38.78:410,39,0	1/1:16,1:17:49.73:454,50,0	1/1:8,1:9:23.78:268,24,0	1/1:6,0:6:14.95:128,15,0	1/1:5,1:5:14.84:129,15,0	0/0:17,0:17:35.88:0,36,533	1/1:16,1:15:44.95:483,45,0	0/0:21,0:19:46.04:0,46,673	1/1:11,1:11:32.98:346,33,0	0/0:14,0:11:33.10:0,33,622	0/0:18,0:18:51.17:0,51,1117	0/0:21,0:21:63.20:0,63,1304	1/1:3,3:6:13.22:117,13,0	1/1:9,0:7:17.98:226,18,0	0/1:20,1:21:30.10:368,0,30	1/1:8,1:9:23.23:220,23,0	0/1:25,0:25:12.59:13,0,1453	0/0:29,0:29:87.28:0,87,1871	0/0:15,0:15:45.14:0,45,1024
chr10	90339300	.	TG	T	2693.26	PASS	AB=0.751;AC=25;AF=0.446;AN=56;BaseQRankSum=14.170;DP=453;FS=18.076;HRun=1;HaplotypeScore=80.8823;InbreedingCoeff=0.8450;MQ=53.83;MQ0=12;MQRankSum=-3.707;QD=16.83;ReadPosRankSum=-1.089;VQSLOD=2.4395;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,1903	0/1:6,0:6:0.23:0,0,109	0/0:13,0:9:17.24:0,17,275	0/0:15,0:11:30.10:0,30,439	1/1:7,7:14:19.43:239,19,0	0/0:16,0:16:48.16:0,48,722	0/0:15,0:15:45.14:0,45,646	0/0:32,0:30:85.42:0,85,1164	1/1:5,8:13:35.78:279,36,0	1/1:7,6:14:39.70:313,40,0	1/1:9,8:17:39.90:365,40,0	1/1:4,6:10:26.49:210,26,0	0/1:3,4:7:0.79:104,0,1	1/1:1,5:5:14.85:125,15,0	0/0:17,0:17:5.82:0,6,267	1/1:6,9:14:40.44:316,40,0	0/0:22,0:20:8.87:0,9,396	1/1:7,5:11:32.50:252,33,0	0/0:14,0:11:33.09:0,33,466	0/0:17,0:17:51.17:0,51,759	0/0:22,0:22:66.17:0,66,928	1/1:3,3:6:12.06:90,12,0	1/1:6,3:7:17.94:144,18,0	0/1:8,13:21:1.95:306,0,2	1/1:6,3:9:20.78:164,21,0	0/0:23,1:24:18.68:0,19,925	0/0:29,0:29:87.26:0,87,1271	0/0:14,0:14:42.14:0,42,638
chr10	90339301	.	G	GGT	1782.38	PASS	AB=0.902;AC=16;AF=0.286;AN=56;BaseQRankSum=10.425;DP=465;FS=11.337;HRun=0;HaplotypeScore=97.1136;InbreedingCoeff=0.2824;MQ=53.45;MQ0=13;MQRankSum=-0.825;QD=11.07;ReadPosRankSum=0.393;VQSLOD=2.4538;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,2058	0/0:6,0:6:15.02:0,15,199	0/0:12,0:7:11.23:0,11,234	0/0:16,0:12:30.09:0,30,462	0/1:14,0:14:46.38:75,0,46	0/0:17,0:17:48.16:0,48,782	0/0:15,0:15:45.15:0,45,727	0/0:32,0:30:86.04:0,86,1275	1/1:11,2:13:31.79:276,32,0	0/1:14,1:15:2:263,0,2	0/1:17,1:18:31.60:141,0,32	0/1:9,1:10:1.95:166,0,2	0/1:6,1:7:0.34:110,0,0	0/1:8,0:7:7.84:100,0,8	0/0:17,0:17:34.84:0,35,447	1/1:13,4:15:24.51:332,25,0	0/0:22,0:20:51.03:0,51,664	0/1:12,1:12:47.68:85,0,48	0/0:15,0:12:33.11:0,33,532	0/0:19,0:19:51.17:0,51,817	0/0:22,0:22:63.20:0,63,993	0/1:5,0:6:24.01:37,0,24	1/1:10,0:8:6.87:42,7,0	0/1:18,3:21:66.35:126,0,66	0/1:5,4:9:5.34:201,0,5	0/0:25,0:25:46.74:0,47,1031	0/0:29,0:29:87.29:0,87,1383	0/0:14,0:14:42.14:0,42,685
chr10	90339304	.	TG	T	3006.52	PASS	AB=0.828;AC=30;AF=0.536;AN=56;BaseQRankSum=16.128;DP=465;FS=8.917;HRun=1;HaplotypeScore=79.0802;InbreedingCoeff=0.8516;MQ=53.51;MQ0=13;MQRankSum=-0.383;QD=14.81;ReadPosRankSum=-1.556;VQSLOD=2.0792;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,1729	0/1:5,0:5:7.63:40,0,8	0/0:11,0:6:15.02:0,15,163	0/0:15,1:11:30.05:0,30,363	1/1:6,7:13:37.92:270,38,0	0/0:18,0:18:54.16:0,54,711	0/0:17,0:17:51.13:0,51,638	0/0:33,0:31:87.72:0,88,1113	1/1:5,8:13:35.82:283,36,0	1/1:8,6:14:32.51:270,33,0	1/1:11,7:18:44.72:362,45,0	1/1:9,3:12:29.95:244,30,0	1/1:3,4:7:7.64:112,8,0	1/1:6,3:8:18.07:144,18,0	1/1:18,0:18:28.42:110,28,0	1/1:8,9:15:44.40:351,44,0	1/1:22,0:20:2.83:133,3,0	1/1:6,4:9:24.31:182,24,0	0/0:14,0:12:36.11:0,36,464	0/0:19,0:19:51.88:0,52,652	0/0:22,0:22:63.17:0,63,805	1/1:2,3:5:11.95:99,12,0	1/1:7,3:8:17.94:147,18,0	0/1:10,11:21:1.10:301,0,1	1/1:7,2:9:23.59:177,24,0	0/0:23,1:24:15.59:0,16,809	0/0:28,0:28:84.26:0,84,1120	0/0:14,0:14:42.14:0,42,579
chr10	90339305	.	GT	G	722.55	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=12.805;DP=474;FS=0.959;HRun=7;HaplotypeScore=88.6296;InbreedingCoeff=0.1803;MQ=53.59;MQ0=13;MQRankSum=1.400;QD=3.86;ReadPosRankSum=3.488;VQSLOD=-0.4418;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,132,1629	1/1:1,4:5:9.01:91,9,0	0/0:11,0:6:9.03:0,9,107	0/0:16,0:11:24.07:0,24,292	0/1:13,0:13:8.19:8,0,19	0/0:18,0:18:54.17:0,54,677	0/0:17,0:17:51.16:0,51,638	0/0:33,0:31:84.26:0,84,1040	0/1:14,0:14:10.96:17,0,11	0/1:14,0:14:5.98:6,0,25	0/1:18,0:18:8.31:8,0,34	0/1:12,0:12:8.31:8,0,23	0/1:7,0:7:0.47:0,0,29	0/1:9,0:8:1.91:2,0,41	1/1:5,13:18:27.04:273,27,0	0/1:17,0:15:4.58:16,0,5	1/1:10,13:21:42.07:424,42,0	0/0:11,0:10:1.53:0,2,46	0/0:14,0:12:36.11:0,36,450	0/0:19,0:19:44.99:0,45,519	0/0:21,0:21:60.17:0,60,727	0/1:6,0:6:4.31:4,0,18	0/0:11,0:9:5.22:0,5,44	0/1:22,0:22:20.95:21,0,36	0/1:9,0:9:2.08:2,0,11	0/0:26,0:26:61.09:0,61,756	0/0:28,0:28:81.25:0,81,1002	0/0:14,0:14:42.13:0,42,528
chr10	90339997	.	A	ATGATG	574.33	PASS	AB=0.798;AC=3;AF=0.054;AN=56;BaseQRankSum=5.517;DP=439;FS=0.000;HRun=0;HaplotypeScore=104.7898;InbreedingCoeff=0.0374;MQ=56.19;MQ0=3;MQRankSum=-3.291;QD=8.57;ReadPosRankSum=-2.795;VQSLOD=1.8190;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:45.15:0,45,1028	0/1:3,3:6:4.85:176,0,5	0/0:10,0:5:12.04:0,12,246	0/0:11,0:5:11.40:0,11,148	0/0:12,0:12:20.53:0,21,348	0/0:16,0:16:36.12:0,36,747	0/0:7,0:7:21.04:0,21,440	0/0:32,0:23:65.53:0,66,1440	0/0:13,0:12:21:0,21,416	0/0:15,0:14:0.85:0,1,635	0/0:14,0:14:11:0,11,606	0/0:14,0:14:35.69:0,36,695	0/0:14,0:14:33.06:0,33,661	0/0:10,0:10:21.07:0,21,448	0/1:33,7:40:51.45:330,0,51	0/0:20,0:20:35.61:0,36,670	0/1:18,3:20:70.96:167,0,71	0/0:6,0:4:9.03:0,9,170	0/0:17,0:16:48.13:0,48,990	0/0:14,0:14:39.13:0,39,724	0/0:20,0:20:54.18:0,54,1106	0/0:6,0:6:5.75:0,6,82	0/0:5,0:5:14.08:0,14,280	0/0:8,0:7:11.22:0,11,206	0/0:14,0:14:17.95:0,18,298	0/0:21,0:21:63.21:0,63,1105	0/0:28,0:26:48.79:0,49,1072	0/0:15,0:15:39.13:0,39,624
chr10	90340006	.	A	AATGATGATGATG	4563.44	PASS	AB=0.804;AC=38;AF=0.731;AN=52;BaseQRankSum=-4.771;DP=501;FS=1.547;HRun=0;HaplotypeScore=136.7569;InbreedingCoeff=0.3556;MQ=52.72;MQ0=5;MQRankSum=-4.599;QD=12.30;ReadPosRankSum=-1.069;VQSLOD=3.8426;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:31:9.03:0,9,251	1/1:6,0:6:9.03:299,9,0	./.	./.	1/1:4,11:19:12.04:343,12,0	0/1:8,0:18:1.18:1,0,138	0/1:8,0:8:14.98:15,0,61	1/1:33,0:21:6.85:48,7,0	1/1:5,12:17:3.01:174,3,0	1/1:16,0:15:23.99:458,24,0	1/1:14,0:14:12.02:302,12,0	1/1:7,8:16:6.02:347,6,0	1/1:9,5:16:6.02:239,6,0	1/1:6,0:16:3.01:118,3,0	1/1:25,0:41:18.53:599,19,0	1/1:9,13:26:9.03:475,9,0	1/1:23,0:22:18.39:353,18,0	1/1:2,5:8:3.01:174,3,0	0/0:14,0:15:11.07:0,11,162	0/0:4,0:15:1.93:0,2,118	0/1:24,0:24:99:110,0,309	1/1:1,7:9:3.01:95,3,0	1/1:4,5:9:3.01:151,3,0	1/1:8,0:7:2.99:24,3,0	1/1:2,17:21:3.01:174,3,0	0/1:5,0:20:66.87:67,0,294	0/0:11,0:28:17.96:0,18,142	0/0:3,0:14:23.94:0,24,189
chr10	90340934	.	T	TTGG	3632.45	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.841;DP=653;FS=5.146;HRun=0;HaplotypeScore=96.3238;InbreedingCoeff=0.9888;MQ=89.57;MQ0=0;MQRankSum=-2.862;QD=57.66;ReadPosRankSum=3.232;VQSLOD=5.6979;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1846	1/1:1,5:6:12.04:283,12,0	0/0:32,0:32:94.28:0,94,1617	0/0:19,0:19:51.15:0,51,887	0/0:13,0:13:36.12:0,36,670	0/0:20,0:20:57.16:0,57,1020	0/0:30,0:30:87.27:0,87,1558	0/0:25,0:25:72.24:0,72,1313	0/0:27,0:27:81.26:0,81,1450	0/0:29,0:29:81.27:0,81,1473	0/0:14,0:14:40.69:0,41,731	0/0:26,0:26:72.23:0,72,1294	0/0:20,0:20:60.21:0,60,1118	0/0:17,0:17:48.16:0,48,894	1/1:0,30:33:84.29:1995,84,0	0/0:28,0:27:81.25:0,81,1430	1/1:0,20:24:57.20:1354,57,0	0/0:23,0:23:63.17:0,63,1138	0/0:28,0:28:81.28:0,81,1480	0/0:16,0:16:45.15:0,45,839	0/0:34,0:34:99:0,99,1779	0/0:29,0:29:84.26:0,84,1503	0/0:18,0:18:54.15:0,54,930	0/0:27,0:27:81.28:0,81,1482	0/0:20,0:20:60.16:0,60,1082	0/0:27,0:27:78.26:0,78,1415	0/0:18,0:18:54.19:0,54,999	0/0:16,0:16:48.16:0,48,895
chr10	90341343	.	CCAT	C	10681.13	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=14.069;DP=792;FS=11.266;HRun=0;HaplotypeScore=134.5041;InbreedingCoeff=0.9202;MQ=64.96;MQ0=1;MQRankSum=-1.363;QD=27.82;ReadPosRankSum=6.418;VQSLOD=4.3622;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,105,2103	0/0:7,0:7:8.98:0,9,111	0/0:31,0:29:69.24:0,69,1317	0/0:26,0:25:48.14:0,48,962	1/1:6,30:37:78.22:1098,78,0	0/0:27,0:27:66.23:0,66,1356	0/0:30,0:30:72.23:0,72,1440	0/0:32,0:32:60.19:0,60,1151	1/1:6,17:23:36.12:524,36,0	1/1:8,29:37:87.29:1262,87,0	1/1:5,16:21:36.12:523,36,0	1/1:7,25:32:60.20:870,60,0	1/1:5,20:25:54.18:785,54,0	1/1:4,23:27:60.20:873,60,0	0/0:35,0:35:27.14:0,27,298	1/1:10,32:42:87.29:1262,87,0	0/1:18,0:18:39.33:125,0,39	1/1:2,17:19:39.13:568,39,0	0/0:22,0:22:54.18:0,54,1076	0/0:28,0:28:75.26:0,75,1538	0/0:43,0:43:99:0,114,2328	1/1:7,23:30:60.20:873,60,0	1/1:7,21:28:39.13:566,39,0	1/1:3,28:31:63.04:917,63,0	1/1:1,13:14:30.10:437,30,0	0/0:36,1:37:37.61:0,38,1560	0/0:32,0:32:81.26:0,81,1627	0/0:17,0:17:48.16:0,48,958
chr10	90341349	.	T	TCATCACCATCAACAACAA	5608.32	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-2.870;DP=820;FS=0.000;HRun=0;HaplotypeScore=393.6925;InbreedingCoeff=0.9774;MQ=64.24;MQ0=1;MQRankSum=-7.855;QD=71.90;ReadPosRankSum=0.556;VQSLOD=3.5972;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,111,4706	1/1:1,5:12:8.73:780,9,0	0/0:39,0:37:99:0,101,2774	0/0:30,0:29:70.86:0,71,1912	0/0:37,0:37:71.51:0,72,2314	0/0:27,0:27:72.23:0,72,2906	0/0:28,0:28:78.23:0,78,3016	0/0:34,0:34:84.21:0,84,2367	0/0:21,0:21:41.43:0,41,1179	0/0:34,0:34:92.99:0,93,2480	0/0:19,0:19:37.35:0,37,1195	0/0:32,0:32:64.42:0,64,1948	0/0:24,0:24:56.88:0,57,1588	0/0:27,0:27:65.94:0,66,2309	1/1:2,25:48:39.61:3146,40,0	0/0:40,0:41:95.96:0,96,3176	1/1:18,0:18:48.05:1682,48,0	0/0:21,0:21:45.12:0,45,1662	0/0:24,0:24:66.21:0,66,2560	0/0:28,0:28:81.28:0,81,3281	0/0:43,0:43:99:0,129,5128	0/0:29,0:29:69.97:0,70,2248	0/0:26,0:26:44.16:0,44,1053	0/0:33,0:33:75.05:0,75,2674	0/0:15,0:15:33.10:0,33,1310	0/0:37,0:37:90.29:0,90,3825	0/0:31,0:31:90.25:0,90,3843	0/0:19,0:19:57.14:0,57,2170
chr10	90341360	.	ATCG	A	4975.51	PASS	AB=0.957;AC=20;AF=0.357;AN=56;BaseQRankSum=18.748;DP=800;FS=21.296;HRun=0;HaplotypeScore=156.1946;InbreedingCoeff=0.2792;MQ=66.49;MQ0=1;MQRankSum=-0.531;QD=13.09;ReadPosRankSum=10.598;VQSLOD=2.3806;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,2492	0/0:9,0:9:8.98:0,9,157	0/0:40,0:38:99:0,114,2045	0/0:34,0:33:64.62:0,65,1310	1/1:36,0:36:34.46:552,34,0	0/0:28,0:28:81.12:0,81,1685	0/0:26,0:26:78.23:0,78,1762	0/0:25,0:25:72.10:0,72,1460	0/1:22,0:22:68.15:225,0,68	0/1:34,0:34:20.90:559,0,21	0/1:23,0:23:82.15:222,0,82	1/1:30,0:30:20.66:433,21,0	1/1:21,0:21:36.84:427,37,0	1/1:27,0:27:0.71:387,1,0	0/0:35,0:35:25.76:0,26,577	0/1:40,1:41:37.48:561,0,37	0/1:9,8:17:38.78:238,0,39	0/1:25,0:25:68.24:223,0,68	0/0:27,0:27:80.84:0,81,1513	0/0:27,0:27:81.28:0,81,1940	0/0:42,0:42:99:0,126,2859	0/1:31,0:31:95.46:347,0,95	1/1:24,0:24:7.81:269,8,0	1/1:32,0:32:2.41:361,2,0	0/1:17,0:17:48.19:172,0,48	0/0:32,0:32:72.56:0,73,2031	0/0:36,0:36:99:0,108,2110	0/0:19,0:19:57.11:0,57,1135
chr10	90344741	.	G	GT	10746.48	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-7.813;DP=568;FS=1.832;HRun=3;HaplotypeScore=95.0787;InbreedingCoeff=0.9994;MQ=79.66;MQ0=0;MQRankSum=-4.547;QD=36.31;ReadPosRankSum=4.270;VQSLOD=4.9428;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:69.18:0,69,802	1/1:0,10:10:30.10:420,30,0	0/0:18,0:18:39:0,39,447	0/0:17,0:17:39.10:0,39,445	1/1:6,31:37:90.17:1193,90,0	0/0:20,0:20:57.17:0,57,684	0/0:15,0:15:45.12:0,45,528	0/0:36,0:36:99:0,102,1188	1/1:1,10:11:33.10:444,33,0	1/1:1,12:13:33.11:462,33,0	1/1:1,25:26:72.24:1006,72,0	1/1:1,16:17:45.15:630,45,0	1/1:0,21:21:54.18:756,54,0	1/1:1,15:16:45.15:630,45,0	1/1:1,18:19:54.18:756,54,0	1/1:3,9:12:30.10:419,30,0	1/1:2,23:25:66.22:924,66,0	1/1:1,12:13:33.11:462,33,0	0/0:20,0:20:53.99:0,54,616	0/0:28,0:28:81.21:0,81,937	0/0:25,0:25:75.20:0,75,876	1/1:6,14:20:51.12:673,51,0	1/1:3,16:19:45.15:630,45,0	1/1:0,9:9:24.08:336,24,0	1/1:2,26:28:72.24:1006,72,0	0/0:25,1:26:36.21:0,36,849	0/0:23,0:22:66.18:0,66,776	0/0:16,0:16:42.13:0,42,504
chr10	90344792	.	C	CTTTTCTTTTT	19214.90	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=-0.636;DP=647;FS=21.141;HRun=0;HaplotypeScore=196.9281;InbreedingCoeff=0.9034;MQ=65.61;MQ0=2;MQRankSum=-12.290;QD=54.74;ReadPosRankSum=-1.102;VQSLOD=3.1225;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:59.59:0,60,1608	0/0:9,0:9:24.04:0,24,502	0/0:41,0:30:8.38:0,8,519	0/1:43,0:25:0.24:0,0,638	1/1:27,12:39:99:2501,105,0	0/0:21,0:21:57.15:0,57,1559	0/0:16,0:16:39.09:0,39,997	0/0:34,0:34:78.14:0,78,1535	1/1:4,13:20:45.15:1874,45,0	1/1:6,16:24:57.12:1980,57,0	1/1:14,17:33:81:2277,81,0	1/1:14,5:19:42.13:1173,42,0	1/1:12,3:15:36.09:900,36,0	1/1:13,6:19:51.11:1447,51,0	0/0:21,0:21:57.15:0,57,1520	1/1:2,12:15:20.87:859,21,0	0/0:25,0:25:69.12:0,69,1696	1/1:14,5:19:46.80:1142,47,0	0/0:21,0:21:57.15:0,57,1320	0/0:18,0:18:51.12:0,51,1294	0/0:22,0:22:60.06:0,60,1263	1/1:2,12:20:50.81:1512,51,0	1/1:8,8:16:42.13:1161,42,0	1/1:9,0:9:20.28:322,20,0	1/1:17,9:26:78.18:2063,78,0	0/1:32,0:32:3.45:3,0,2136	0/0:24,0:23:60.16:0,60,1541	0/0:15,0:15:39.12:0,39,928
chr10	90345338	.	G	GCTTTA	28493.54	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-13.249;DP=944;FS=4.173;HRun=0;HaplotypeScore=161.9071;InbreedingCoeff=0.9938;MQ=78.08;MQ0=1;MQRankSum=-9.743;QD=63.46;ReadPosRankSum=0.968;VQSLOD=5.8732;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,117,2289	0/0:14,0:14:42.14:0,42,852	0/0:25,0:25:57.19:0,57,1020	0/0:23,0:23:10.27:0,10,673	1/1:1,17:21:45.57:1050,46,0	0/0:18,0:18:48.16:0,48,974	0/0:43,0:43:99:0,111,2242	0/0:31,0:31:81.26:0,81,1537	1/1:5,37:42:90.31:2628,90,0	1/1:4,27:32:84.29:2299,84,0	1/1:4,20:24:50.96:1396,51,0	1/1:9,41:51:99:3211,108,0	1/1:1,32:34:78.27:2330,78,0	1/1:4,36:42:84.05:2527,84,0	0/0:43,0:43:99:0,120,2294	1/1:2,44:50:99:3564,120,0	0/0:36,0:36:99:0,105,2085	1/1:4,22:27:57.19:1600,57,0	0/0:28,0:28:66.21:0,66,1262	0/0:26,0:26:66.21:0,66,1239	0/0:89,0:88:99:0,253,4934	1/1:6,29:37:82.44:2267,82,0	1/1:2,13:18:39:1029,39,0	1/1:3,35:39:87.77:2579,88,0	1/1:5,25:29:69.24:2013,69,0	0/0:27,0:27:75.26:0,75,1517	0/0:30,0:30:81.26:0,81,1582	0/0:19,0:19:57.20:0,57,1157
chr10	90345595	.	TTTG	T	6297.90	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=9.989;DP=546;FS=2.905;HRun=0;HaplotypeScore=102.9100;InbreedingCoeff=0.9928;MQ=70.15;MQ0=0;MQRankSum=-10.689;QD=26.80;ReadPosRankSum=2.298;VQSLOD=4.8037;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.14:0,66,1257	0/0:8,0:8:15.03:0,15,269	0/0:28,0:28:28.85:0,29,378	0/0:15,0:14:33.10:0,33,563	1/1:10,6:16:30.08:406,30,0	0/0:12,0:12:27.04:0,27,439	0/0:21,0:21:47.99:0,48,770	0/0:35,0:35:78.16:0,78,1330	1/1:6,15:21:51.15:709,51,0	1/1:13,12:25:45.11:604,45,0	1/1:6,7:13:36.01:451,36,0	1/1:17,11:28:50.85:629,51,0	1/1:7,11:18:39.10:525,39,0	1/1:6,11:17:48.12:632,48,0	0/0:20,0:20:48.10:0,48,823	1/1:10,9:19:39.03:481,39,0	0/0:25,0:25:56.89:0,57,945	1/1:3,9:12:14.08:179,14,0	0/0:23,0:23:51.05:0,51,689	0/0:11,0:11:26.93:0,27,365	0/0:25,0:25:39.10:0,39,679	1/1:7,12:19:39.06:537,39,0	1/1:10,4:13:17.98:181,18,0	1/1:5,9:14:20.94:253,21,0	1/1:5,14:18:51.13:710,51,0	0/0:18,0:18:45.15:0,45,887	0/0:32,0:32:62.86:0,63,965	0/0:13,0:13:33.09:0,33,621
chr10	90345628	.	GTTT	G	5984.29	PASS	AB=0.882;AC=32;AF=0.571;AN=56;BaseQRankSum=10.592;DP=560;FS=4.627;HRun=13;HaplotypeScore=113.9623;InbreedingCoeff=0.8655;MQ=59.40;MQ0=0;MQRankSum=-8.773;QD=19.24;ReadPosRankSum=7.479;VQSLOD=3.2739;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:32:90.17:0,90,1385	1/1:3,2:5:2.98:36,3,0	0/1:16,0:14:5.43:5,0,160	0/0:16,0:15:21.05:0,21,251	1/1:7,9:17:27.07:341,27,0	0/0:16,0:16:48.14:0,48,784	0/0:20,0:22:52.34:0,52,855	0/0:42,0:45:84.15:0,84,1287	1/1:7,19:26:54.02:654,54,0	1/1:7,12:19:28.34:361,28,0	1/1:2,20:22:49.87:617,50,0	1/1:4,15:19:29.98:364,30,0	1/1:7,11:19:29.89:345,30,0	1/1:7,15:22:29.91:346,30,0	1/1:6,16:23:37.34:471,37,0	1/1:5,10:15:20.99:255,21,0	1/1:3,23:26:45.07:547,45,0	0/1:8,1:9:3.03:131,0,3	0/0:17,0:19:47.34:0,47,761	0/0:12,0:14:40.36:0,40,663	0/0:16,0:17:39.06:0,39,616	1/1:4,17:21:42.08:509,42,0	1/1:0,8:9:13.42:180,13,0	1/1:2,17:19:29.33:363,29,0	1/1:2,17:19:26.18:457,26,0	0/0:19,0:22:48.12:0,48,753	0/0:24,0:29:51.14:0,51,892	0/0:14,0:16:46.36:0,46,781
chr10	90345864	.	C	CTT	5690.09	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-9.341;DP=461;FS=1.327;HRun=8;HaplotypeScore=55.9051;InbreedingCoeff=0.8885;MQ=72.64;MQ0=1;MQRankSum=0.621;QD=28.88;ReadPosRankSum=0.409;VQSLOD=4.5029;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,1098	0/0:8,0:8:24.06:0,24,268	0/0:22,0:19:40.88:0,41,399	0/1:8,0:5:61.86:62,0,78	1/1:5,25:30:69.15:1002,69,0	0/0:18,0:18:50.73:0,51,545	0/0:7,0:7:21.06:0,21,234	0/0:34,0:33:82.04:0,82,880	1/1:5,12:17:36.12:569,36,0	1/1:5,10:15:24.08:378,24,0	1/1:3,10:13:30.02:421,30,0	1/1:1,12:13:27.09:429,27,0	1/1:1,10:11:30.10:476,30,0	1/1:2,13:15:27.09:429,27,0	0/0:19,0:19:54.13:0,54,590	1/1:0,11:11:27.09:429,27,0	0/0:22,0:22:60.16:0,60,667	1/1:5,18:22:38.16:578,38,0	0/0:20,0:20:45.10:0,45,501	0/0:18,0:18:45.11:0,45,498	0/0:20,0:20:33.05:0,33,368	1/1:1,6:7:12.04:166,12,0	1/1:0,12:12:24.08:371,24,0	1/1:1,3:4:2.77:47,3,0	1/1:3,15:17:21.07:333,21,0	0/0:19,1:20:9.52:0,10,549	0/0:11,0:11:30.06:0,30,324	0/0:7,0:7:18.05:0,18,200
chr10	90346772	.	AAACAAC	A	4044.60	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=6.649;DP=329;FS=5.895;HRun=0;HaplotypeScore=75.5212;InbreedingCoeff=0.9335;MQ=43.93;MQ0=1;MQRankSum=-4.372;QD=30.87;ReadPosRankSum=1.617;VQSLOD=2.5539;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:54.01:0,54,1623	0/0:4,0:4:12.04:0,12,314	0/0:11,0:4:12.04:0,12,330	0/0:7,0:6:18.05:0,18,443	1/1:2,11:13:11.74:79,12,0	0/0:17,0:17:51.18:0,51,1688	0/0:8,0:8:24.08:0,24,784	0/0:21,0:21:51.12:0,51,1454	1/1:0,8:8:15.05:322,15,0	1/1:0,10:10:30.05:598,30,0	1/1:0,14:14:23.95:381,24,0	1/1:0,7:7:18.06:386,18,0	1/1:0,10:10:12:213,12,0	1/1:0,6:6:15.01:271,15,0	0/0:13,0:13:39.13:0,39,922	1/1:0,9:10:15.05:271,15,0	0/0:9,0:12:24.08:0,24,558	1/1:0,10:10:24.08:484,24,0	0/0:14,0:13:24.03:0,24,619	0/0:11,0:11:33.11:0,33,1030	0/0:13,0:13:29.99:0,30,741	1/1:0,10:10:15.01:277,15,0	1/1:0,7:7:14.92:188,15,0	1/1:2,11:13:0.98:61,1,0	1/1:0,13:13:24.08:514,24,0	0/0:17,0:17:51.13:0,51,1608	0/0:22,0:22:66.23:0,66,2092	0/0:5,0:5:15.05:0,15,499
chr10	90346795	.	A	AC	244.22	PASS	AB=0.640;AC=3;AF=0.054;AN=56;BaseQRankSum=3.414;DP=440;FS=11.944;HRun=0;HaplotypeScore=75.9062;InbreedingCoeff=0.1395;MQ=57.97;MQ0=1;MQRankSum=1.170;QD=5.81;ReadPosRankSum=3.131;VQSLOD=2.5705;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:63.21:0,63,874	0/1:2,4:6:3.68:76,0,4	0/0:12,0:8:22.23:0,22,246	0/0:14,0:13:38.15:0,38,453	0/0:19,0:19:57.10:0,57,745	0/0:22,0:22:66.22:0,66,915	0/0:10,0:10:30.09:0,30,403	0/0:28,0:28:78.19:0,78,1029	0/0:12,0:12:26.81:0,27,248	0/0:18,0:18:50.68:0,51,493	0/0:16,0:16:44.88:0,45,509	0/0:13,0:13:32.79:0,33,323	0/0:15,0:15:35.96:0,36,430	0/0:11,0:11:32.94:0,33,373	0/1:7,12:18:12.99:174,0,13	0/0:14,0:14:29.88:0,30,324	0/1:10,7:17:56:94,0,56	0/0:13,0:13:32.70:0,33,289	0/0:15,0:14:36.07:0,36,464	0/0:16,0:16:48.16:0,48,664	0/0:14,0:14:29.99:0,30,370	0/0:17,0:17:44.93:0,45,533	0/0:13,0:13:32.99:0,33,396	0/0:12,0:12:5.97:0,6,61	0/0:17,0:17:41.72:0,42,403	0/0:17,0:17:51.17:0,51,708	0/0:26,0:26:78.26:0,78,1084	0/0:9,0:9:18.06:0,18,250
chr10	90346796	.	A	AAC	456.77	PASS	AB=0.653;AC=3;AF=0.054;AN=56;BaseQRankSum=3.490;DP=445;FS=1.712;HRun=0;HaplotypeScore=84.5746;InbreedingCoeff=-0.0506;MQ=58.00;MQ0=1;MQRankSum=-1.103;QD=10.62;ReadPosRankSum=3.063;VQSLOD=3.5085;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:63.21:0,63,953	0/1:3,4:7:20.50:112,0,20	0/0:12,0:8:24.06:0,24,304	0/0:14,0:13:35.13:0,35,469	0/0:19,0:19:57.09:0,57,819	0/0:22,0:22:66.22:0,66,986	0/0:10,0:10:30.09:0,30,439	0/0:29,0:29:81.17:0,81,1143	0/0:12,0:12:30.07:0,30,377	0/0:18,0:18:51.16:0,51,689	0/0:16,0:16:45.15:0,45,644	0/0:13,0:13:36.11:0,36,483	0/0:16,0:16:36.12:0,36,524	0/0:11,0:11:33.11:0,33,474	0/1:7,12:18:21.36:300,0,21	0/0:14,0:14:30.10:0,30,426	0/1:10,7:17:99:145,0,123	0/0:13,0:13:33.05:0,33,427	0/0:15,0:14:33.09:0,33,482	0/0:16,0:16:48.16:0,48,733	0/0:14,0:14:30.02:0,30,406	0/0:17,0:17:48.15:0,48,679	0/0:13,0:13:33.10:0,33,459	0/0:13,0:13:6.02:0,6,83	0/0:18,0:18:42.14:0,42,576	0/0:17,0:17:51.17:0,51,775	0/0:26,0:26:78.26:0,78,1192	0/0:9,0:9:27.04:0,27,346
chr10	90348910	.	C	CTG	15007.69	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=14.237;DP=637;FS=7.981;HRun=0;HaplotypeScore=96.0432;InbreedingCoeff=0.9852;MQ=78.01;MQ0=1;MQRankSum=-4.334;QD=44.93;ReadPosRankSum=4.744;VQSLOD=6.3986;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1607	1/1:0,7:7:15.03:254,15,0	0/0:26,0:25:66.15:0,66,873	0/0:25,0:25:72.22:0,72,1004	1/1:1,16:17:45.14:794,45,0	0/0:26,0:26:78.25:0,78,1099	0/0:19,0:19:54.18:0,54,774	0/0:20,0:20:57.19:0,57,817	1/1:0,20:21:51.17:932,51,0	1/1:3,24:27:72.19:1219,72,0	1/1:1,13:14:33.11:605,33,0	1/1:3,20:23:60.21:1099,60,0	1/1:2,20:22:60.21:1100,60,0	1/1:2,26:28:75.26:1350,75,0	1/1:1,20:21:54.19:986,54,0	1/1:5,17:23:51.17:933,51,0	1/1:2,32:35:90.31:1649,90,0	1/1:0,18:18:54.19:990,54,0	0/0:21,0:21:63.19:0,63,870	0/0:24,0:24:69.19:0,69,965	0/0:51,0:51:99:0,135,1869	1/1:4,12:16:27.09:495,27,0	1/1:0,6:6:9.03:145,9,0	1/1:4,35:39:90.31:1634,90,0	1/1:0,16:16:45.15:825,45,0	0/0:27,0:27:78.26:0,78,1118	0/0:20,0:20:57.19:0,57,817	0/0:4,0:4:12.04:0,12,172
chr10	90349015	.	T	TC	915.71	PASS	AB=1.000;AC=23;AF=0.479;AN=48;BaseQRankSum=1.940;DP=344;FS=3.191;HRun=1;HaplotypeScore=65.8511;InbreedingCoeff=0.6625;MQ=61.52;MQ0=36;MQRankSum=2.121;QD=6.64;ReadPosRankSum=1.912;VQSLOD=0.9126;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:10.17:0,10,90	1/1:2,11:12:2.92:17,3,0	0/0:14,0:5:3.43:0,3,19	0/0:18,0:11:5.61:0,6,25	./.	0/0:7,0:8:6:0,6,53	0/0:21,0:18:11.84:0,12,81	0/0:10,0:8:8.94:0,9,66	1/1:6,0:4:2.96:19,3,0	1/1:8,0:6:11.90:90,12,0	1/1:9,0:8:2.99:24,3,0	1/1:13,0:11:11.98:99,12,0	./.	0/0:5,12:16:0:0,0,0	1/1:5,10:13:6.01:76,6,0	1/1:13,0:12:8.93:65,9,0	1/1:16,8:22:53.33:506,53,0	1/1:13,0:12:14.86:106,15,0	0/0:8,0:5:8.23:0,8,62	0/0:9,0:8:11.69:0,12,93	0/0:13,0:13:8.99:0,9,76	./.	0/1:6,0:5:0:0,0,0	1/1:11,0:11:8.63:55,9,0	1/1:7,0:6:3:25,3,0	0/0:8,0:8:11.98:0,12,103	0/0:16,0:16:9.42:0,9,69	./.
chr10	90350758	.	ATG	A	4510.94	PASS	AB=0.525;AC=25;AF=0.446;AN=56;BaseQRankSum=11.219;DP=727;FS=5.624;HRun=0;HaplotypeScore=123.1044;InbreedingCoeff=0.9173;MQ=50.09;MQ0=31;MQRankSum=-1.345;QD=17.15;ReadPosRankSum=2.601;VQSLOD=4.7968;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,123,2031	0/0:9,0:9:18.06:0,18,300	0/0:49,1:8:17.34:0,17,159	0/0:61,0:8:20.87:0,21,230	1/1:1,16:13:14.94:195,15,0	0/0:16,0:16:45.15:0,45,757	0/0:31,1:31:90.25:0,90,1446	0/0:36,0:36:70.19:0,70,1167	1/1:3,23:19:33.08:428,33,0	1/1:10,13:17:33.05:392,33,0	1/1:1,12:12:18.06:234,18,0	1/1:1,25:22:39.13:507,39,0	1/1:7,6:13:18.06:230,18,0	1/1:3,27:26:29.62:386,30,0	0/0:36,0:36:48.16:0,48,808	1/1:6,12:13:21.07:272,21,0	0/0:33,0:33:54.16:0,54,855	1/1:8,13:19:42.14:539,42,0	0/0:18,0:18:47.16:0,47,682	0/0:18,0:18:54.13:0,54,872	0/0:53,0:52:99:0,135,2207	1/1:1,18:13:30.10:390,30,0	1/1:2,11:10:12.04:156,12,0	0/1:3,28:29:14.88:393,0,15	1/1:1,12:12:29.94:391,30,0	0/0:23,0:23:59.23:0,59,973	0/0:15,0:15:36.10:0,36,588	0/0:15,0:15:33.11:0,33,561
chr10	90350768	.	GTA	G	1342.65	PASS	AB=0.976;AC=16;AF=0.286;AN=56;BaseQRankSum=12.105;DP=778;FS=5.418;HRun=0;HaplotypeScore=145.6847;InbreedingCoeff=0.0905;MQ=48.81;MQ0=40;MQRankSum=0.235;QD=4.81;ReadPosRankSum=7.745;VQSLOD=1.9002;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,121,2362	0/0:8,0:8:17.99:0,18,161	0/0:73,0:10:16.97:0,17,227	0/0:78,0:12:29.66:0,30,375	1/1:18,0:14:13.94:74,14,0	0/0:17,0:17:48.15:0,48,936	0/0:35,0:34:99:0,99,1774	0/0:29,0:29:87.19:0,87,1505	0/1:27,0:20:28.10:147,0,28	1/1:19,0:13:16.44:133,16,0	1/1:14,0:13:1.15:68,1,0	0/1:31,0:27:43.74:146,0,44	0/1:12,1:13:57.47:74,0,57	0/1:30,1:27:8.36:167,0,8	0/0:35,0:35:48.01:0,48,425	0/1:19,1:15:53.57:89,0,54	0/0:31,0:31:53.90:0,54,467	0/1:22,1:21:57.17:210,0,57	0/0:19,0:19:55.72:0,56,974	0/0:18,0:18:54.15:0,54,979	0/0:59,0:59:99:0,129,2666	0/1:21,0:16:37.30:113,0,37	0/1:13,0:10:10.50:48,0,10	0/1:31,0:29:47.86:129,0,48	0/1:17,0:16:17.56:114,0,18	0/0:22,0:22:58.74:0,59,1119	0/0:14,0:14:39.09:0,39,711	0/0:13,0:13:39.10:0,39,698
chr10	90350788	.	ATGTGTGTGTGTGTGTGTGTGTGTGTGTG	A	1312.54	PASS	AB=0.634;AC=5;AF=0.089;AN=56;BaseQRankSum=3.696;DP=754;FS=0.000;HRun=0;HaplotypeScore=399.7760;InbreedingCoeff=0.6237;MQ=46.93;MQ0=48;MQRankSum=-3.553;QD=21.17;ReadPosRankSum=1.112;VQSLOD=0.6615;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:44:72.20:0,72,4969	1/1:3,4:7:3.01:213,3,0	0/0:69,0:8:6.02:0,6,111	0/0:80,0:9:14.84:0,15,187	0/0:17,0:13:21.07:0,21,1169	0/0:15,0:17:30.10:0,30,2985	0/0:26,0:32:55.13:0,55,3660	0/0:22,0:20:36.10:0,36,1547	0/0:24,0:19:49.98:0,50,2966	0/0:20,0:16:42.14:0,42,2772	0/0:12,0:12:17.82:0,18,1116	0/0:34,0:31:57.61:0,58,3274	0/0:17,0:17:39.13:0,39,2767	0/0:27,0:26:42.27:0,42,2733	1/1:7,22:29:12.04:573,12,0	0/0:19,0:16:36.12:0,36,2852	0/1:11,15:25:53.99:640,0,54	0/0:24,0:22:54.15:0,54,3848	0/0:22,0:21:36.12:0,36,2922	0/0:8,0:9:18.06:0,18,929	0/0:48,0:58:96.31:0,96,6961	0/0:21,0:17:39.13:0,39,2036	0/0:11,0:8:21.07:0,21,1288	0/0:33,0:33:52.90:0,53,3563	0/0:16,0:16:33.58:0,34,1630	0/0:22,0:25:39.13:0,39,2453	0/0:10,0:16:23.68:0,24,1882	0/0:12,0:16:24.08:0,24,1977
chr10	90350827	.	T	TTC	5396.91	PASS	AB=0.903;AC=23;AF=0.411;AN=56;BaseQRankSum=9.759;DP=604;FS=5.184;HRun=0;HaplotypeScore=126.6171;InbreedingCoeff=0.7548;MQ=51.37;MQ0=20;MQRankSum=-1.803;QD=21.42;ReadPosRankSum=2.867;VQSLOD=5.5054;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:86.04:0,86,1190	0/0:10,0:10:8.70:0,9,101	0/0:14,0:5:15.05:0,15,232	0/0:32,0:21:38.02:0,38,699	1/1:9,6:13:21.06:293,21,0	0/0:23,0:23:55.22:0,55,751	0/0:33,0:32:63.83:0,64,916	0/0:19,0:15:42.06:0,42,577	1/1:14,6:17:41.97:661,42,0	0/1:17,1:15:99:278,0,118	0/1:11,1:11:5.05:238,0,5	1/1:18,8:24:37.47:618,37,0	1/1:2,14:16:27.03:431,27,0	1/1:18,1:21:40.55:529,41,0	0/0:31,0:31:23.91:0,24,298	1/1:11,11:20:11.86:498,12,0	0/0:34,0:33:29.52:0,30,335	1/1:7,19:25:3.45:311,3,0	0/0:20,0:18:49.87:0,50,630	0/0:10,0:10:27.08:0,27,372	0/0:43,0:39:77.83:0,78,1078	1/1:8,3:11:26.60:314,27,0	1/1:9,2:9:21.04:297,21,0	0/1:25,6:30:20.76:621,0,21	1/1:13,4:17:21.77:309,22,0	0/0:17,0:17:44.17:0,44,628	0/0:15,0:15:28.56:0,29,291	0/0:11,0:10:18.43:0,18,191
chr10	90350829	.	T	TTCGC	6722.16	PASS	AB=0.971;AC=25;AF=0.446;AN=56;BaseQRankSum=6.583;DP=615;FS=5.015;HRun=0;HaplotypeScore=137.8219;InbreedingCoeff=0.9005;MQ=51.27;MQ0=20;MQRankSum=-2.456;QD=25.46;ReadPosRankSum=0.983;VQSLOD=4.6987;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:80.14:0,80,1506	0/0:10,0:10:5.65:0,6,122	0/0:15,0:6:15.05:0,15,310	0/0:34,0:23:55.25:0,55,1001	1/1:19,0:16:23.95:442,24,0	0/0:23,0:23:55.99:0,56,1016	0/0:32,0:31:65.31:0,65,1205	0/0:19,0:15:36.12:0,36,689	1/1:23,1:20:46.30:735,46,0	1/1:6,10:14:27.42:462,27,0	1/1:9,2:10:19.31:349,19,0	1/1:27,0:25:10.14:715,10,0	1/1:16,0:16:26.18:400,26,0	1/1:21,0:21:39.49:629,39,0	0/0:31,0:31:24.02:0,24,410	1/1:23,2:22:33.07:541,33,0	0/0:34,0:33:32.80:0,33,525	1/1:27,0:24:25.50:295,26,0	0/0:20,0:18:45.12:0,45,787	0/0:9,0:9:24.08:0,24,441	0/0:43,0:39:84.21:0,84,1442	1/1:13,0:12:23.95:396,24,0	1/1:14,0:10:24.08:410,24,0	0/1:33,1:33:43.96:962,0,44	1/1:14,2:16:27.78:388,28,0	0/0:17,0:17:45.15:0,45,854	0/0:15,0:15:30.52:0,31,468	0/0:11,0:10:24.05:0,24,323
chr10	90352708	.	CT	C	3504.84	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.032;DP=729;FS=4.357;HRun=2;HaplotypeScore=70.0473;InbreedingCoeff=0.9997;MQ=85.95;MQ0=0;MQRankSum=-0.431;QD=36.89;ReadPosRankSum=1.221;VQSLOD=4.3649;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1817	1/1:0,13:13:36.12:466,36,0	0/0:28,0:28:84.28:0,84,1257	0/0:23,0:23:57.19:0,57,825	0/0:19,0:19:51.05:0,51,688	0/0:25,0:25:72.24:0,72,1078	0/0:32,0:32:93.26:0,93,1346	0/0:40,0:40:99:0,120,1790	0/0:29,0:29:81.27:0,81,1212	0/0:24,0:24:72.24:0,72,1060	0/0:15,0:15:36.04:0,36,472	0/0:33,0:33:96.33:0,96,1437	0/0:18,0:18:54.18:0,54,809	0/0:31,0:31:93.30:0,93,1374	1/1:0,40:40:99:1480,114,0	0/0:37,0:37:99:0,108,1557	1/1:1,41:42:99:1558,120,0	0/0:24,0:24:72.24:0,72,1076	0/0:26,0:26:78.26:0,78,1161	0/0:13,0:13:39.10:0,39,560	0/0:35,0:35:99:0,99,1458	0/0:12,0:12:36:0,36,446	0/0:13,0:13:39.13:0,39,584	0/0:29,0:29:87.28:0,87,1283	0/0:17,0:17:48.12:0,48,676	0/0:31,0:31:93.30:0,93,1368	0/0:27,0:27:81.26:0,81,1188	0/0:11,0:11:33.11:0,33,493
chr10	90353656	.	GAA	G	2153.13	PASS	AB=0.764;AC=31;AF=0.554;AN=56;BaseQRankSum=9.062;DP=479;FS=2.555;HRun=15;HaplotypeScore=86.4639;InbreedingCoeff=0.6529;MQ=55.73;MQ0=6;MQRankSum=0.462;QD=7.35;ReadPosRankSum=5.031;VQSLOD=0.8328;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:41:80.88:0,81,997	1/1:1,0:9:16.15:67,16,0	0/0:8,0:3:6.02:0,6,68	0/1:7,1:6:4.97:5,0,27	1/1:15,5:23:28.84:265,29,0	0/0:16,0:16:34.56:0,35,361	0/0:17,0:18:31.84:0,32,488	0/0:28,0:29:47.14:0,47,523	1/1:5,10:14:17.28:159,17,0	1/1:10,9:20:22.57:222,23,0	1/1:10,1:12:16.15:108,16,0	0/1:13,3:16:0.25:152,0,0	1/1:13,0:12:12.65:110,13,0	1/1:9,3:12:19.11:120,19,0	1/1:5,1:26:37.63:170,38,0	1/1:5,15:20:13.06:173,13,0	1/1:6,0:25:43.43:200,43,0	1/1:10,14:21:26.69:232,27,0	0/0:15,0:16:9.44:0,9,321	0/0:10,0:10:20.98:0,21,211	0/0:15,0:15:39.58:0,40,496	0/1:2,2:4:13.75:20,0,14	1/1:3,6:9:5.51:93,6,0	0/1:6,4:13:13.31:118,0,13	1/1:7,8:13:16.64:138,17,0	0/1:19,1:22:7.51:8,0,163	0/0:23,0:23:50.21:0,50,536	0/0:8,0:8:14.53:0,15,171
chr10	90354180	.	TGGGGG	T	12421.08	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=2.643;DP=522;FS=2.985;HRun=12;HaplotypeScore=109.7236;InbreedingCoeff=0.9677;MQ=71.92;MQ0=0;MQRankSum=-5.321;QD=38.10;ReadPosRankSum=10.949;VQSLOD=2.2875;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:21.04:0,21,401	1/1:2,9:11:24.07:423,24,0	0/0:15,0:15:24.06:0,24,506	0/0:21,0:23:23.62:0,24,681	1/1:4,6:10:18.05:317,18,0	0/0:11,0:11:8.46:0,8,233	0/0:14,0:17:24.55:0,25,594	0/0:16,0:17:27.08:0,27,536	1/1:4,18:22:48.13:846,48,0	1/1:4,22:26:57.15:996,57,0	1/1:3,8:11:18.03:317,18,0	1/1:9,32:41:78.19:1375,78,0	1/1:2,22:24:45.15:793,45,0	1/1:1,25:26:66.21:1163,66,0	1/1:1,25:26:66.22:1164,66,0	1/1:3,24:27:63.18:1111,63,0	1/1:3,24:27:54.62:953,55,0	1/1:2,16:18:48.14:846,48,0	0/0:14,0:17:21.04:0,21,389	0/0:11,0:11:12.04:0,12,337	0/0:19,0:24:26.13:0,26,521	1/1:2,11:13:27.07:476,27,0	1/1:0,7:7:14.72:264,15,0	1/1:1,26:27:60.20:1058,60,0	1/1:1,9:10:18.05:317,18,0	0/0:17,0:17:18.05:0,18,389	0/0:14,0:15:18.06:0,18,404	0/0:2,0:3:9.03:0,9,231
chr10	90354300	.	C	CACTTGAAACGTGT	21599.75	PASS	AB=0.763;AC=52;AF=0.963;AN=54;BaseQRankSum=0.544;DP=244;FS=51.436;HRun=0;HaplotypeScore=266.5552;InbreedingCoeff=-0.0564;MQ=68.51;MQ0=0;MQRankSum=-3.548;QD=89.26;ReadPosRankSum=1.571;VQSLOD=3.1122;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:30.09:1158,30,0	./.	0/1:5,1:9:26:780,0,26	0/1:4,0:5:23.83:33,0,24	1/1:5,0:5:12.04:397,12,0	1/1:7,0:7:18.06:889,18,0	1/1:11,0:11:30.10:1118,30,0	1/1:5,0:5:15.04:467,15,0	1/1:6,0:6:9.03:393,9,0	1/1:16,0:16:33.11:1537,33,0	1/1:5,0:5:12.04:401,12,0	1/1:11,0:12:26.66:890,27,0	1/1:16,0:16:36.12:1663,36,0	1/1:17,0:17:36.12:1602,36,0	1/1:10,0:11:22.50:812,23,0	1/1:10,0:11:27.09:1307,27,0	1/1:6,0:6:12.04:468,12,0	1/1:6,0:6:9.03:510,9,0	1/1:8,0:9:21.07:890,21,0	1/1:9,0:9:24.08:1160,24,0	1/1:7,0:7:18.06:560,18,0	1/1:9,0:9:21.06:550,21,0	1/1:3,0:3:3.01:117,3,0	1/1:10,0:10:24.08:794,24,0	1/1:10,0:10:21.07:708,21,0	1/1:10,0:10:21.07:908,21,0	1/1:8,0:8:15.05:694,15,0	1/1:5,0:5:15.05:791,15,0
chr10	90355512	.	A	ACC	1484.56	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=7.196;DP=187;FS=11.763;HRun=0;HaplotypeScore=56.7659;InbreedingCoeff=0.7541;MQ=55.25;MQ0=0;MQRankSum=-5.162;QD=25.16;ReadPosRankSum=-2.414;VQSLOD=3.0947;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:25.32:0,25,315	0/0:2,0:2:5.23:0,5,51	0/0:6,0:3:0.97:0,1,99	0/0:7,0:2:3.01:0,3,43	1/1:4,2:6:11.96:162,12,0	0/0:10,0:10:27.08:0,27,332	0/0:6,0:6:18.06:0,18,243	0/0:14,0:14:42.13:0,42,558	1/1:0,3:3:9.03:130,9,0	1/1:7,4:11:26.41:356,26,0	1/1:6,0:6:7.68:93,8,0	1/1:2,1:3:9.03:121,9,0	1/1:0,3:3:9.03:137,9,0	1/1:3,1:4:8.82:118,9,0	0/0:2,0:2:6.02:0,6,82	1/1:3,3:6:18.06:252,18,0	0/0:10,0:10:24.06:0,24,303	1/1:2,1:3:5.61:47,6,0	0/0:13,0:13:39.13:0,39,538	0/0:7,0:7:21.05:0,21,256	0/0:9,0:9:19.26:0,19,243	1/1:3,2:5:11.99:151,12,0	1/1:6,0:6:8.77:80,9,0	0/0:2,0:2:0.47:0,0,2	1/1:3,0:3:2.58:34,3,0	0/0:16,1:17:4.36:0,4,590	0/0:10,0:9:30.09:0,30,381	0/0:3,0:3:9.02:0,9,107
chr10	90355515	.	AAC	A	637.99	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=4.343;DP=208;FS=15.001;HRun=0;HaplotypeScore=60.8269;InbreedingCoeff=0.7288;MQ=60.02;MQ0=0;MQRankSum=-1.766;QD=9.97;ReadPosRankSum=-4.963;VQSLOD=0.6660;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:26.95:0,27,169	0/0:4,0:4:11.95:0,12,105	0/0:7,0:4:17.29:0,17,131	0/0:8,0:3:5.99:0,6,58	1/1:6,0:6:9.43:56,9,0	0/0:10,0:10:29.39:0,29,192	0/0:6,0:6:17.78:0,18,123	0/0:15,0:15:44.24:0,44,302	0/0:3,0:3:3.17:0,3,8	1/1:11,2:13:26.02:184,26,0	1/1:4,3:7:19.42:140,19,0	1/1:3,1:4:8.14:62,8,0	0/1:4,0:4:7.31:13,0,7	1/1:3,1:4:10.93:70,11,0	0/0:4,0:4:12.01:0,12,140	1/1:6,1:7:6.60:64,7,0	0/0:10,0:10:26.97:0,27,325	0/0:3,0:3:2.13:0,2,6	0/0:15,0:15:43.92:0,44,294	0/0:7,0:7:20.72:0,21,154	0/0:11,0:11:32.41:0,32,220	1/1:5,0:5:9:56,9,0	1/1:6,0:6:11.74:75,12,0	1/1:1,1:2:5.95:44,6,0	1/1:2,1:3:8.91:66,9,0	0/0:17,0:17:39.10:0,39,344	0/0:12,0:11:35.39:0,35,234	0/1:3,0:3:7.89:8,0,29
chr10	90355849	.	TC	T	8961	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=14.612;DP=592;FS=0.650;HRun=6;HaplotypeScore=81.5623;InbreedingCoeff=0.9973;MQ=95.89;MQ0=0;MQRankSum=-2.521;QD=28.63;ReadPosRankSum=6.387;VQSLOD=4.7427;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,114,1452	1/1:1,6:7:18.05:193,18,0	0/0:33,0:33:73.53:0,74,1056	0/0:24,0:24:50.90:0,51,660	1/1:2,19:21:48.12:516,48,0	0/0:11,0:11:30.10:0,30,395	0/0:21,0:21:60.18:0,60,774	0/0:28,0:28:66.19:0,66,830	1/1:0,23:23:66.17:709,66,0	1/1:1,17:18:51.13:548,51,0	1/1:1,14:15:39.10:419,39,0	1/1:3,21:24:63.16:677,63,0	1/1:2,15:17:42.10:451,42,0	1/1:1,12:13:33.08:355,33,0	1/1:1,23:24:60.15:645,60,0	1/1:1,19:20:57.14:613,57,0	1/1:1,26:27:75.19:806,75,0	1/1:0,26:26:78.20:838,78,0	0/0:15,0:15:45.15:0,45,591	0/0:18,0:18:48.16:0,48,630	0/0:32,0:32:93.29:0,93,1206	1/1:5,15:20:39.09:418,39,0	1/1:1,9:10:24.06:258,24,0	1/1:0,32:32:93.23:1000,93,0	1/1:1,15:16:48.12:516,48,0	0/0:24,1:25:39.98:0,40,875	0/0:20,0:20:60.20:0,60,789	0/0:6,0:6:18.06:0,18,237
chr10	90356426	.	T	TA	1779.12	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.906;DP=596;FS=0.000;HRun=7;HaplotypeScore=59.8351;InbreedingCoeff=0.9412;MQ=76.09;MQ0=0;MQRankSum=-1.292;QD=27.80;ReadPosRankSum=0.253;VQSLOD=4.1342;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,956	1/1:2,8:10:21.06:254,21,0	0/0:15,0:15:3.29:0,3,270	0/0:17,0:17:45.06:0,45,428	0/0:30,0:30:84.12:0,84,806	0/0:21,0:21:60.09:0,60,579	0/0:26,0:26:66.08:0,66,630	0/0:37,0:37:84.13:0,84,811	0/0:16,0:16:42.07:0,42,405	0/0:22,0:22:63.09:0,63,605	0/0:25,0:25:72.09:0,72,684	0/0:11,0:11:33.05:0,33,319	0/0:14,0:14:36.06:0,36,348	0/0:17,0:17:48.07:0,48,464	1/1:2,17:19:51.16:616,51,0	0/0:27,0:27:72.11:0,72,695	1/1:1,34:35:87.27:1051,87,0	0/0:28,0:28:75.09:0,75,717	0/0:16,0:16:47.99:0,48,447	0/0:25,0:25:60.09:0,60,579	0/0:10,0:10:30.05:0,30,290	0/0:17,0:17:45.06:0,45,430	0/0:21,0:21:57.09:0,57,550	0/0:15,0:15:42.06:0,42,406	0/0:24,0:24:66.11:0,66,637	0/0:27,0:27:72.11:0,72,695	0/0:24,0:23:63.09:0,63,608	0/0:11,0:11:33.05:0,33,319
chr10	90359303	.	C	CT	1817.07	PASS	AB=0.964;AC=27;AF=0.482;AN=56;BaseQRankSum=9.734;DP=365;FS=4.785;HRun=2;HaplotypeScore=89.0028;InbreedingCoeff=0.8045;MQ=71.65;MQ0=8;MQRankSum=-7.923;QD=10.32;ReadPosRankSum=-0.163;VQSLOD=1.4401;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:37.43:0,37,579	0/0:3,0:3:1.73:0,2,22	0/1:51,0:19:38.96:39,0,127	0/0:42,0:15:5.46:0,5,107	1/1:5,3:7:6:52,6,0	0/0:6,0:6:18.05:0,18,211	0/0:17,0:17:17.22:0,17,230	0/0:13,0:12:26.70:0,27,299	1/1:2,3:5:6.90:81,7,0	1/1:7,5:12:26.78:258,27,0	1/1:4,9:13:29.30:225,29,0	1/1:2,4:6:12:108,12,0	1/1:10,6:15:30.48:237,30,0	1/1:4,6:10:23.79:186,24,0	0/0:7,0:6:18.04:0,18,195	1/1:3,7:10:20.83:172,21,0	0/0:12,0:12:6.05:0,6,100	1/1:5,3:8:5.93:102,6,0	0/0:9,0:9:27:0,27,285	0/0:14,0:14:29.98:0,30,319	0/0:11,0:11:29.55:0,30,304	1/1:5,5:10:23.24:209,23,0	1/1:4,3:7:16.54:114,17,0	1/1:7,3:7:7.46:68,7,0	1/1:0,7:7:20.95:181,21,0	0/0:9,0:9:26.79:0,27,250	0/0:12,0:12:36.05:0,36,378	0/0:9,0:9:16.98:0,17,145
chr10	90359310	.	C	CA	2073.03	PASS	AB=0.667;AC=25;AF=0.446;AN=56;BaseQRankSum=9.306;DP=369;FS=3.740;HRun=0;HaplotypeScore=87.9730;InbreedingCoeff=0.8257;MQ=68.70;MQ0=5;MQRankSum=-8.239;QD=16.85;ReadPosRankSum=2.750;VQSLOD=6.2001;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:57.64:0,58,752	0/0:4,0:4:9.59:0,10,62	0/0:50,0:19:3.29:0,3,275	0/0:45,0:16:8.96:0,9,204	1/1:2,4:5:2.99:23,3,0	0/0:7,0:7:18.06:0,18,248	0/0:17,0:17:38.79:0,39,403	0/0:14,0:14:38.03:0,38,416	1/1:3,3:6:7.07:94,7,0	1/1:3,9:12:14.63:279,15,0	1/1:1,10:11:29.26:233,29,0	1/1:0,7:7:14.98:130,15,0	1/1:7,9:15:28.07:376,28,0	1/1:2,8:10:23.68:183,24,0	0/0:7,0:7:21.07:0,21,291	1/1:3,8:11:23.95:219,24,0	0/0:14,0:14:26.83:0,27,246	0/1:4,4:8:12.38:70,0,12	0/0:11,0:11:26.91:0,27,328	0/0:13,0:13:36.09:0,36,468	0/0:12,0:12:30.08:0,30,387	1/1:2,9:11:27.90:283,28,0	1/1:2,5:7:18:182,18,0	1/1:6,4:8:4.58:67,5,0	1/1:1,7:8:17.96:149,18,0	0/0:8,0:8:21.02:0,21,254	0/0:13,0:13:39.12:0,39,528	0/0:8,0:8:14.99:0,15,165
chr10	90360291	.	GC	G	8497.25	PASS	AB=0.583;AC=51;AF=0.944;AN=54;BaseQRankSum=-2.734;DP=392;FS=5.172;HRun=2;HaplotypeScore=62.6358;InbreedingCoeff=0.3718;MQ=38.55;MQ0=7;MQRankSum=0.455;QD=22.66;ReadPosRankSum=2.061;VQSLOD=4.6457;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:18:33.09:411,33,0	1/1:0,5:5:9.03:116,9,0	./.	0/0:7,2:2:3.01:0,3,45	1/1:0,15:12:21.06:263,21,0	1/1:2,17:16:39.13:504,39,0	1/1:1,10:9:7.63:219,8,0	1/1:5,20:22:19.88:445,20,0	1/1:0,8:4:9.03:117,9,0	0/1:2,5:4:26.80:94,0,27	1/1:1,16:12:18.06:233,18,0	1/1:1,16:13:30.06:364,30,0	1/1:1,9:7:18.06:233,18,0	1/1:1,11:11:30.08:374,30,0	1/1:0,16:11:27.09:350,27,0	1/1:1,16:13:39.13:504,39,0	1/1:4,19:20:45.15:582,45,0	1/1:0,8:8:24.08:311,24,0	1/1:1,12:12:30.10:389,30,0	1/1:2,12:14:36.06:433,36,0	1/1:3,17:16:23.76:311,24,0	1/1:0,8:6:9.03:117,9,0	1/1:0,12:9:21.07:272,21,0	1/1:3,15:17:39.13:505,39,0	1/1:1,10:9:21.07:272,21,0	1/1:1,16:13:36.02:415,36,0	1/1:0,23:14:36.12:466,36,0	1/1:2,6:7:15.05:194,15,0
chr10	90360296	.	CG	C	6060.32	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.100;DP=378;FS=0.000;HRun=5;HaplotypeScore=68.7294;InbreedingCoeff=0.5885;MQ=37.03;MQ0=7;MQRankSum=0.954;QD=16.47;ReadPosRankSum=2.223;VQSLOD=4.2435;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:16:21.04:228,21,0	1/1:2,2:4:6.02:68,6,0	0/0:4,0:1:3.01:0,3,41	0/0:6,0:2:3.01:0,3,41	1/1:4,11:12:18.02:184,18,0	1/1:1,18:16:33.09:373,33,0	1/1:1,11:9:21.04:226,21,0	1/1:5,18:21:27.05:293,27,0	1/1:0,9:5:9.03:102,9,0	1/1:2,4:3:5.88:49,6,0	1/1:1,15:11:15.04:169,15,0	1/1:3,16:15:24.04:256,24,0	1/1:2,7:6:12.03:136,12,0	1/1:1,11:11:24.07:271,24,0	1/1:0,16:11:24.07:271,24,0	1/1:3,14:13:27.08:304,27,0	1/1:6,17:19:39.11:441,39,0	1/1:2,6:8:18.05:204,18,0	1/1:2,10:11:30.07:328,30,0	1/1:3,10:13:24.07:271,24,0	1/1:5,15:18:20.72:227,21,0	1/1:0,8:6:9.03:102,9,0	1/1:2,11:10:15.04:169,15,0	1/1:1,15:16:33.09:373,33,0	1/1:4,6:8:9.02:102,9,0	1/1:4,15:14:30.08:339,30,0	1/1:0,23:14:36.10:407,36,0	1/1:0,7:6:15.04:170,15,0
chr10	90360467	.	AG	A	6072.92	PASS	AB=0.917;AC=53;AF=0.946;AN=56;BaseQRankSum=-1.426;DP=257;FS=5.058;HRun=6;HaplotypeScore=60.8283;InbreedingCoeff=0.4227;MQ=59.20;MQ0=6;MQRankSum=-3.406;QD=24.59;ReadPosRankSum=2.848;VQSLOD=4.9955;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:19:45.11:483,45,0	1/1:0,4:4:12.03:129,12,0	0/0:8,2:4:8.97:0,9,79	0/1:10,1:5:24.78:25,0,25	1/1:0,15:15:42.11:450,42,0	1/1:1,11:11:30.07:322,30,0	1/1:0,9:7:18.04:191,18,0	1/1:5,4:8:15.51:158,16,0	1/1:0,4:4:12.03:129,12,0	1/1:1,8:7:18.05:193,18,0	1/1:0,8:8:21.05:226,21,0	1/1:0,12:12:36.09:387,36,0	1/1:0,2:2:6.02:64,6,0	1/1:1,4:5:12.03:129,12,0	1/1:0,6:6:18.05:193,18,0	1/1:0,6:6:15.04:161,15,0	1/1:0,21:20:45.11:483,45,0	1/1:3,9:10:27.07:290,27,0	1/1:4,9:12:27.07:290,27,0	1/1:0,4:4:9.02:97,9,0	1/1:0,7:7:18.05:193,18,0	1/1:1,2:3:6.02:64,6,0	1/1:1,6:7:18.05:193,18,0	1/1:0,11:9:21.05:222,21,0	1/1:2,7:9:21.05:226,21,0	1/1:0,10:10:30.08:322,30,0	1/1:0,12:11:33.08:354,33,0	1/1:0,5:5:9.02:97,9,0
chr10	90360575	.	TA	T	708.06	PASS	AC=20;AF=0.400;AN=50;BaseQRankSum=6.809;DP=273;FS=5.369;HRun=2;HaplotypeScore=35.6655;InbreedingCoeff=0.7752;MQ=66.97;MQ0=1;MQRankSum=-3.446;QD=27.23;ReadPosRankSum=-3.047;VQSLOD=2.2268;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:29:78.18:0,78,1083	0/0:2,0:2:6.02:0,6,84	0/0:9,0:4:0.37:0,0,60	0/0:20,1:11:21.10:0,21,194	1/1:0,3:2:6.02:78,6,0	0/0:19,0:18:54.12:0,54,743	0/0:12,0:11:30.06:0,30,424	0/0:17,0:17:48.14:0,48,665	./.	1/1:0,3:3:9.03:116,9,0	1/1:1,5:5:12.04:153,12,0	./.	1/1:0,2:2:6.02:75,6,0	1/1:0,1:1:3.01:39,3,0	0/0:15,0:15:45.09:0,45,627	1/1:0,3:3:9.03:117,9,0	0/0:31,0:30:78.26:0,78,1154	1/1:0,4:4:12.04:155,12,0	0/0:22,0:21:60.13:0,60,780	0/0:9,0:9:27.05:0,27,379	0/0:21,2:23:24.39:0,24,799	./.	1/1:0,2:2:6.02:78,6,0	1/1:0,1:1:3.01:39,3,0	1/1:1,0:1:3.01:37,3,0	0/0:12,0:12:33.11:0,33,477	0/0:12,0:12:36.09:0,36,498	0/0:11,0:11:33.11:0,33,490
chr10	90360677	.	A	AG	377.88	PASS	AB=0.789;AC=17;AF=0.304;AN=56;BaseQRankSum=6.014;DP=388;FS=0.000;HRun=0;HaplotypeScore=75.7339;InbreedingCoeff=0.1525;MQ=49.94;MQ0=20;MQRankSum=-2.702;QD=2.10;ReadPosRankSum=7.782;VQSLOD=1.3043;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:65.50:0,66,473	0/0:8,0:8:20.96:0,21,207	0/1:21,0:7:2.71:3,0,60	0/1:12,0:4:2.50:4,0,3	0/1:10,7:15:37.97:38,0,71	0/0:22,0:21:49.73:0,50,419	0/0:5,0:5:11.88:0,12,104	0/0:17,0:14:32.40:0,32,270	0/1:9,4:10:26.28:26,0,32	0/1:6,2:7:17.59:18,0,26	0/1:7,3:10:17.02:41,0,17	1/1:7,7:13:6.86:67,7,0	0/1:3,2:5:2.98:17,0,3	0/1:3,1:3:5.68:6,0,18	0/0:16,0:14:38.95:0,39,369	0/1:4,6:8:6.49:50,0,6	0/0:32,0:29:76.94:0,77,712	0/1:15,12:22:20.54:137,0,21	0/0:11,0:10:30.02:0,30,309	0/0:11,0:9:23.87:0,24,187	0/0:6,0:5:14.15:0,14,112	0/0:2,0:2:0:0,0,0	1/1:1,2:2:5.77:30,6,0	1/1:9,7:13:10.99:74,11,0	0/1:15,5:19:28.58:29,0,92	0/0:19,0:19:55.66:0,56,438	0/0:14,0:12:31.83:0,32,324	0/0:15,0:11:32.94:0,33,274
chr10	90360683	.	A	AG	2628.85	PASS	AB=1.000;AC=30;AF=0.556;AN=54;BaseQRankSum=9.096;DP=386;FS=0.437;HRun=0;HaplotypeScore=70.1132;InbreedingCoeff=0.8259;MQ=52.70;MQ0=16;MQRankSum=-1.095;QD=12.46;ReadPosRankSum=4.957;VQSLOD=4.0952;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:62.13:0,62,437	0/1:7,0:7:35.08:40,0,35	0/0:22,0:8:6.26:0,6,88	0/1:12,0:4:1.33:4,0,1	1/1:11,7:16:11.09:211,11,0	0/0:20,0:19:46.75:0,47,377	0/0:7,0:7:17.50:0,18,146	0/0:20,0:17:40.57:0,41,338	1/1:9,4:10:29.74:217,30,0	1/1:9,2:12:26.21:228,26,0	1/1:7,3:10:8.05:170,8,0	1/1:6,7:12:32.71:245,33,0	1/1:2,2:4:11.61:76,12,0	1/1:6,1:6:14.86:108,15,0	1/1:14,0:13:18.49:160,18,0	1/1:3,6:8:20.86:161,21,0	1/1:29,0:26:11.51:213,12,0	1/1:14,11:20:46.31:344,46,0	0/0:12,0:12:35.97:0,36,338	0/0:14,0:12:32.05:0,32,241	0/0:6,0:5:13.99:0,14,99	./.	1/1:1,2:2:6:51,6,0	1/1:7,7:11:29.72:222,30,0	1/1:16,5:20:52.48:388,52,0	0/0:18,0:18:30.50:0,30,349	0/0:15,0:13:31.85:0,32,305	0/0:11,0:9:26.85:0,27,200
chr10	90360743	.	A	AT	4967.89	PASS	AB=0.900;AC=27;AF=0.482;AN=56;BaseQRankSum=0.028;DP=405;FS=10.591;HRun=5;HaplotypeScore=59.4947;InbreedingCoeff=0.8757;MQ=62.76;MQ0=2;MQRankSum=-3.715;QD=25.48;ReadPosRankSum=1.759;VQSLOD=3.6926;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.16:0,72,761	0/0:9,0:9:27.04:0,27,274	0/0:9,0:6:8.99:0,9,81	0/0:7,0:6:8.95:0,9,80	1/1:2,21:23:57.10:690,57,0	0/0:23,0:23:60.09:0,60,614	0/0:11,0:11:30.07:0,30,321	0/0:23,0:23:66.15:0,66,694	1/1:1,10:11:21.07:268,21,0	1/1:1,22:23:63.12:757,63,0	1/1:1,14:15:36.05:444,36,0	1/1:3,11:12:21.07:272,21,0	1/1:1,8:9:21.07:271,21,0	1/1:1,11:12:30.10:387,30,0	0/0:18,0:18:45.11:0,45,483	1/1:3,4:7:12.04:155,12,0	0/0:28,0:28:69.07:0,69,705	1/1:5,20:25:46.70:585,47,0	0/0:11,0:11:27.07:0,27,289	0/0:18,0:17:48.12:0,48,512	0/0:8,0:8:24.06:0,24,253	1/1:0,2:2:6.02:78,6,0	1/1:2,3:5:6.02:78,6,0	1/1:1,10:11:21.07:271,21,0	1/1:1,19:20:54.17:688,54,0	0/1:16,2:18:23.40:23,0,448	0/0:14,0:14:39.09:0,39,411	0/0:7,0:7:18.05:0,18,193
chr10	90361094	.	C	CTGTT	5924.20	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=13.550;DP=631;FS=4.110;HRun=0;HaplotypeScore=125.2487;InbreedingCoeff=0.9799;MQ=74.08;MQ0=1;MQRankSum=-11.921;QD=25.65;ReadPosRankSum=0.430;VQSLOD=4.1528;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,120,1908	0/0:10,0:10:30.04:0,30,392	0/0:37,0:34:65.76:0,66,792	0/0:30,0:28:53.30:0,53,840	1/1:20,0:20:38.09:596,38,0	0/0:15,0:15:33.10:0,33,537	0/0:33,0:33:67.75:0,68,1049	0/0:24,0:24:45.10:0,45,619	1/1:23,0:23:33.10:603,33,0	1/1:24,1:25:55.89:844,56,0	1/1:14,0:14:23.85:267,24,0	1/1:22,0:22:21.07:422,21,0	1/1:13,2:15:21.07:404,21,0	1/1:23,1:24:21.07:372,21,0	0/0:21,0:21:57.16:0,57,891	1/1:15,0:15:15.05:274,15,0	0/0:37,0:37:87.14:0,87,1282	1/1:17,0:17:24.08:461,24,0	0/0:28,0:28:61.23:0,61,726	0/0:21,0:21:60.16:0,60,943	0/0:54,0:54:99:0,150,2370	1/1:19,0:19:48.08:842,48,0	1/1:12,0:12:18.06:345,18,0	1/1:18,0:18:15.01:261,15,0	1/1:7,0:7:12.04:232,12,0	0/0:25,0:25:57.16:0,57,894	0/0:16,0:15:42.06:0,42,602	0/0:4,0:4:9.01:0,9,125
chr10	90361105	.	T	TTAGTTTGG	10931.07	PASS	AB=0.522;AC=22;AF=0.393;AN=56;BaseQRankSum=0.063;DP=673;FS=0.000;HRun=0;HaplotypeScore=151.7134;InbreedingCoeff=0.7533;MQ=63.27;MQ0=1;MQRankSum=-11.639;QD=40.34;ReadPosRankSum=1.868;VQSLOD=4.7006;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,3601	0/0:10,0:10:30.10:0,30,531	0/0:34,0:30:65.11:0,65,1562	0/0:28,0:25:68.54:0,69,1619	1/1:1,0:22:19.41:1040,19,0	0/0:17,0:17:51.01:0,51,1092	0/0:33,0:33:87.22:0,87,2040	0/0:25,0:25:66.20:0,66,1409	0/1:2,0:29:12.96:1114,0,13	1/1:2,0:32:52.80:1777,53,0	0/1:2,0:15:0.09:297,0,0	0/1:1,0:22:2.91:759,0,3	1/1:5,1:19:21.07:768,21,0	1/1:1,0:26:21.07:751,21,0	0/0:25,0:25:16.63:0,17,1041	1/1:1,0:16:15.05:545,15,0	0/0:35,0:35:65.52:0,66,1574	1/1:0,0:19:24.08:857,24,0	0/0:28,0:28:84.22:0,84,1551	0/0:20,0:20:60.21:0,60,1641	0/0:55,0:55:99:0,163,4246	1/1:1,0:21:29.24:1493,29,0	1/1:0,0:14:17.47:672,17,0	0/1:2,0:25:25.67:436,0,26	1/1:1,0:11:12.04:422,12,0	0/0:25,0:25:72.22:0,72,1722	0/0:16,0:15:45.14:0,45,1084	0/0:4,0:4:12.03:0,12,247
chr10	90361304	.	A	ATT	877.82	PASS	AB=0.981;AC=23;AF=0.411;AN=56;BaseQRankSum=2.994;DP=385;FS=5.715;HRun=14;HaplotypeScore=62.3062;InbreedingCoeff=0.5388;MQ=66.30;MQ0=11;MQRankSum=-2.000;QD=5.26;ReadPosRankSum=-1.032;VQSLOD=-0.7620;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:38:43.83:0,44,432	1/1:3,4:7:12.04:157,12,0	0/0:9,0:7:2.89:0,3,21	0/0:13,0:11:3.21:0,3,36	0/1:13,0:13:0:0,0,0	0/0:10,0:10:14.58:0,15,111	0/0:14,0:16:10.87:0,11,182	0/0:29,0:30:20.89:0,21,432	0/1:6,0:6:0:0,0,0	1/1:22,0:21:1.77:5,2,0	0/1:13,0:13:0:0,0,0	0/1:13,0:13:0:0,0,0	1/1:6,0:6:0.89:2,1,0	0/1:5,0:4:0:0,0,0	1/1:3,6:9:18:216,18,0	0/1:4,0:4:0:0,0,0	1/1:11,13:28:46.68:619,47,0	0/1:8,0:7:0:0,0,0	0/0:16,1:15:23.88:0,24,242	0/0:15,0:15:29.85:0,30,244	0/0:11,0:10:14.82:0,15,125	0/1:6,0:6:0:0,0,0	1/1:12,0:12:0.47:1,0,0	1/1:9,0:9:1.36:3,1,0	0/0:8,0:8:2.61:0,3,25	0/0:22,0:27:49.77:0,50,411	0/0:19,0:18:35.87:0,36,342	0/1:4,0:4:5.33:5,0,19
chr10	90363770	.	GGTC	G	12418.52	PASS	AB=0.923;AC=27;AF=0.482;AN=56;BaseQRankSum=7.882;DP=591;FS=13.924;HRun=0;HaplotypeScore=107.6135;InbreedingCoeff=0.9057;MQ=73.96;MQ0=1;MQRankSum=-0.572;QD=41.40;ReadPosRankSum=6.659;VQSLOD=5.4579;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.27:0,78,1657	0/0:11,0:11:21.07:0,21,377	0/0:27,0:22:29.92:0,30,861	0/0:25,0:23:3.55:0,4,727	1/1:0,17:17:36.12:612,36,0	0/0:25,0:25:72.24:0,72,1664	0/0:22,0:22:66.22:0,66,1453	0/0:24,0:24:72.25:0,72,1573	1/1:0,22:23:63.21:1144,63,0	1/1:0,30:30:88.76:1478,89,0	1/1:2,17:19:45.15:799,45,0	1/1:1,24:25:31.50:1076,31,0	1/1:0,19:20:48.16:872,48,0	1/1:0,17:17:42.14:780,42,0	0/0:25,0:25:57.17:0,57,1022	1/1:0,25:25:63.09:1168,63,0	0/0:30,0:30:72.25:0,72,1330	1/1:0,24:24:57.20:1037,57,0	0/0:9,0:9:27.08:0,27,521	0/0:11,0:11:33.11:0,33,707	0/0:17,0:17:45.05:0,45,996	1/1:0,28:28:75.24:1367,75,0	1/1:0,20:20:50.72:923,51,0	1/1:0,18:18:36.12:666,36,0	1/1:0,8:10:29.99:459,30,0	0/1:22,1:24:35.92:36,0,1437	0/0:24,0:23:72.25:0,72,1650	0/0:15,0:15:45.15:0,45,967
chr10	90363772	.	T	TC	811.53	PASS	AB=0.808;AC=7;AF=0.125;AN=56;BaseQRankSum=-6.190;DP=591;FS=0.627;HRun=10;HaplotypeScore=129.7079;InbreedingCoeff=0.1823;MQ=76.57;MQ0=1;MQRankSum=3.450;QD=7.31;ReadPosRankSum=-0.912;VQSLOD=1.5548;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:26:15.81:0,16,323	1/1:2,9:11:12.03:128,12,0	0/0:27,0:23:28.98:0,29,192	0/1:25,1:24:37.44:37,0,110	0/0:17,0:17:19.01:0,19,58	0/0:24,0:24:70.94:0,71,569	0/0:21,0:23:48.95:0,49,378	0/0:22,1:23:38.88:0,39,313	0/0:23,0:23:44.83:0,45,140	0/0:30,0:30:52.51:0,53,178	0/0:18,0:19:31.39:0,31,100	0/0:25,0:25:46.54:0,47,156	0/0:20,0:20:35.52:0,36,111	0/0:17,0:17:30.42:0,30,94	0/1:7,17:24:28.73:320,0,29	0/0:25,0:25:45.57:0,46,141	0/1:8,21:30:16.96:437,0,17	0/0:24,0:24:39.89:0,40,126	0/1:9,0:9:11.44:11,0,105	0/1:10,1:11:8.04:8,0,145	0/0:17,0:17:38.92:0,39,317	0/0:28,0:28:53.39:0,53,168	0/0:20,0:20:35.67:0,36,113	0/0:18,0:18:24.69:0,25,75	0/0:10,0:10:16.94:0,17,53	0/0:23,0:24:56.74:0,57,435	0/0:24,0:23:59.90:0,60,492	0/0:15,0:15:43.97:0,44,348
chr10	90366244	.	A	AGTGT	6093.19	PASS	AB=0.647;AC=25;AF=0.446;AN=56;BaseQRankSum=-5.483;DP=656;FS=64.010;HRun=0;HaplotypeScore=136.2768;InbreedingCoeff=0.8672;MQ=75.68;MQ0=3;MQRankSum=-3.138;QD=33.12;ReadPosRankSum=3.815;VQSLOD=2.3058;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,105,1864	0/0:7,0:8:12.03:0,12,179	0/0:43,0:32:40.49:0,40,672	0/0:43,0:36:25.66:0,26,407	1/1:7,11:19:20.20:457,20,0	0/0:19,0:21:54.18:0,54,884	0/0:34,0:34:60.20:0,60,989	0/0:28,0:29:39.12:0,39,628	1/1:8,10:18:29.84:680,30,0	1/1:5,10:15:33.11:816,33,0	1/1:5,7:12:12.04:295,12,0	1/1:7,8:16:23.77:524,24,0	1/1:3,10:13:21.07:520,21,0	1/1:6,7:13:0.51:354,1,0	0/0:46,0:48:99:0,129,2086	1/1:3,6:9:12.04:297,12,0	0/0:18,0:21:44.89:0,45,688	1/1:5,10:16:29.81:629,30,0	0/0:23,0:23:42.12:0,42,638	0/0:22,0:22:48.15:0,48,771	0/0:55,0:57:89.16:0,89,1894	0/1:5,6:11:38.83:210,0,39	1/1:5,8:14:26.61:527,27,0	1/1:6,11:19:29.57:619,30,0	1/1:5,3:9:9.90:164,10,0	0/0:39,0:42:72.40:0,72,1251	0/0:26,0:31:78.21:0,78,1171	0/0:5,0:5:12.04:0,12,202
chr10	90367457	.	GA	G	165.99	PASS	AC=4;AF=0.091;AN=44;BaseQRankSum=2.407;DP=175;FS=0.000;HRun=7;HaplotypeScore=24.4261;InbreedingCoeff=0.5100;MQ=26.37;MQ0=31;MQRankSum=-0.686;QD=12.77;ReadPosRankSum=-0.309;VQSLOD=0.9030;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:14:21.06:0,21,257	./.	./.	./.	./.	0/0:2,0:2:6.02:0,6,75	0/0:13,0:10:15.01:0,15,171	0/0:9,0:9:24.08:0,24,300	0/0:13,0:12:33.11:0,33,415	0/0:6,0:5:15.05:0,15,188	0/0:5,0:2:3.01:0,3,38	0/0:7,0:7:18.02:0,18,208	0/0:7,0:6:15.05:0,15,189	0/0:5,0:5:12:0,12,133	1/1:1,6:6:18.04:181,18,0	0/0:5,0:4:9.03:0,9,106	1/1:2,4:5:9.02:92,9,0	0/0:4,0:3:9.03:0,9,113	0/0:5,0:1:3.01:0,3,37	0/0:7,0:5:3.01:0,3,33	0/0:6,0:4:6.02:0,6,75	0/0:2,0:1:3.01:0,3,38	./.	0/0:8,0:6:6.02:0,6,76	0/0:7,0:6:9.03:0,9,113	0/0:9,0:6:9.03:0,9,113	0/0:10,0:9:19.41:0,19,230	./.
chr10	90367683	.	TTA	T	2909.95	PASS	AB=0.576;AC=25;AF=0.463;AN=54;BaseQRankSum=2.570;DP=390;FS=0.000;HRun=0;HaplotypeScore=41.4198;InbreedingCoeff=0.8017;MQ=51.77;MQ0=29;MQRankSum=-0.351;QD=18.30;ReadPosRankSum=5.097;VQSLOD=3.3045;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:14:33.07:0,33,501	0/0:1,0:1:0:0,0,0	0/0:12,0:3:5.96:0,6,49	./.	1/1:1,13:13:18.02:212,18,0	0/0:17,0:16:44.95:0,45,550	0/0:10,0:8:15.01:0,15,227	0/0:28,0:23:68.98:0,69,939	1/1:3,9:12:33.03:390,33,0	0/1:5,14:17:48.67:374,0,49	1/1:2,11:11:2.02:211,2,0	1/1:2,10:10:12.04:154,12,0	1/1:1,11:11:15.05:193,15,0	1/1:4,9:13:20.96:249,21,0	0/0:15,0:14:10.86:0,11,138	1/1:4,11:14:27:332,27,0	0/0:29,0:25:33.19:0,33,235	1/1:2,9:11:17.99:231,18,0	0/0:17,0:12:35.73:0,36,440	0/0:6,0:5:12.03:0,12,168	0/0:7,0:7:15.05:0,15,244	1/1:1,3:4:5.98:76,6,0	1/1:2,2:3:5.88:77,6,0	1/1:5,15:19:26.96:346,27,0	1/1:0,10:10:21.07:271,21,0	0/0:26,0:22:36.66:0,37,810	0/0:22,0:20:51.03:0,51,730	0/0:10,0:10:26.21:0,26,290
chr10	90367960	.	C	CT	10949.95	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=4.622;DP=640;FS=17.473;HRun=1;HaplotypeScore=76.6400;InbreedingCoeff=0.9992;MQ=67.99;MQ0=0;MQRankSum=0.650;QD=37.50;ReadPosRankSum=4.340;VQSLOD=3.2742;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1497	0/0:10,0:10:27.07:0,27,335	0/0:14,0:12:32.45:0,32,383	0/0:23,0:22:65.03:0,65,713	1/1:2,24:26:60.20:897,60,0	0/0:25,0:25:60.19:0,60,777	0/0:18,0:18:48.16:0,48,623	0/0:30,0:30:84.25:0,84,1065	1/1:0,20:20:48.16:719,48,0	1/1:1,29:30:81.27:1214,81,0	1/1:0,22:22:63.13:894,63,0	1/1:0,17:17:38.92:559,39,0	1/1:0,13:12:20.84:314,21,0	1/1:0,34:34:81.27:1208,81,0	0/0:23,0:23:54.16:0,54,686	1/1:0,19:18:51.17:764,51,0	0/0:34,0:34:90.22:0,90,1147	1/1:1,28:29:75.25:1124,75,0	0/0:21,0:20:60.15:0,60,749	0/0:15,0:15:42.12:0,42,530	0/0:30,0:30:87.22:0,87,1070	1/1:0,17:17:39.09:559,39,0	1/1:0,25:25:72.24:1079,72,0	1/1:0,22:22:60.20:899,60,0	1/1:0,18:18:48.16:719,48,0	0/0:19,0:19:57.19:0,57,740	0/0:21,0:20:51.13:0,51,661	0/0:25,0:25:75.24:0,75,973
chr10	90368531	.	GT	G	2240.65	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=12.035;DP=472;FS=12.995;HRun=1;HaplotypeScore=72.0610;InbreedingCoeff=0.9679;MQ=81.23;MQ0=1;MQRankSum=-2.808;QD=15.89;ReadPosRankSum=-6.469;VQSLOD=0.8864;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1598	0/0:9,0:9:24.05:0,24,306	0/0:23,0:23:50.80:0,51,722	0/0:26,0:24:42.47:0,42,618	1/1:9,3:12:25.85:192,26,0	0/0:23,0:23:69.22:0,69,966	0/0:26,0:26:75.18:0,75,978	0/0:19,0:19:57.15:0,57,734	1/1:6,8:14:24.83:214,25,0	1/1:6,4:10:14.98:139,15,0	1/1:1,9:10:5.57:43,6,0	1/1:7,4:11:26.97:235,27,0	1/1:0,4:4:12.02:117,12,0	1/1:5,3:8:17.97:167,18,0	0/0:23,0:23:69.19:0,69,935	1/1:6,11:17:42.02:387,42,0	0/0:32,0:32:96.18:0,96,1283	1/1:4,14:18:45.37:401,45,0	0/0:24,0:24:72.17:0,72,940	0/0:15,0:15:45.15:0,45,643	0/0:27,0:27:72.19:0,72,969	1/1:2,5:7:17.91:151,18,0	1/1:5,4:9:12.37:96,12,0	1/1:0,10:10:14.87:108,15,0	1/1:7,4:11:26.82:218,27,0	0/0:20,0:20:54.18:0,54,773	0/0:16,0:16:45.13:0,45,611	0/0:7,0:7:21.03:0,21,259
chr10	90368535	.	GGGT	G	2974.60	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=11.949;DP=467;FS=14.939;HRun=0;HaplotypeScore=86.6202;InbreedingCoeff=0.9613;MQ=82.88;MQ0=1;MQRankSum=-5.440;QD=21.10;ReadPosRankSum=-5.481;VQSLOD=0.5660;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,2550	0/0:9,0:9:27.08:0,27,527	0/0:23,0:23:50.79:0,51,1292	0/0:28,0:26:21.44:0,21,1068	1/1:10,0:10:14.39:153,14,0	0/0:23,0:23:66.22:0,66,1419	0/0:23,0:23:66.18:0,66,1356	0/0:21,0:21:60.20:0,60,1219	1/1:13,0:13:22.10:270,22,0	1/1:12,0:12:13.26:109,13,0	1/1:11,0:11:6.48:75,6,0	1/1:8,0:8:23.99:278,24,0	1/1:4,0:4:12.04:192,12,0	1/1:8,0:8:16.38:157,16,0	0/0:24,0:24:69.24:0,69,1504	1/1:17,1:18:40.12:559,40,0	0/0:28,0:28:84.20:0,84,1695	1/1:17,0:17:44.04:532,44,0	0/0:21,0:21:60.07:0,60,1301	0/0:15,0:15:45.15:0,45,991	0/0:26,0:26:69.24:0,69,1480	1/1:8,0:8:15.71:280,16,0	1/1:8,1:9:8.95:129,9,0	1/1:13,0:13:19.93:211,20,0	1/1:8,2:10:21.04:257,21,0	0/0:21,0:21:54.66:0,55,1182	0/0:17,0:17:51.17:0,51,1062	0/0:6,0:6:18.06:0,18,366
chr10	90368536	.	GGT	G	2228.52	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=12.094;DP=465;FS=15.111;HRun=0;HaplotypeScore=80.3472;InbreedingCoeff=0.9623;MQ=82.90;MQ0=1;MQRankSum=-6.240;QD=16.03;ReadPosRankSum=-5.015;VQSLOD=0.9920;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,2065	0/0:9,0:9:27.07:0,27,427	0/0:23,0:23:57.58:0,58,1051	0/0:28,0:26:46.96:0,47,882	1/1:8,2:10:14.64:142,15,0	0/0:23,0:23:66.21:0,66,1144	0/0:23,0:23:66.18:0,66,1110	0/0:21,0:21:60.17:0,60,989	1/1:5,8:13:21.45:197,21,0	1/1:9,2:11:12.48:126,12,0	1/1:8,2:10:6.48:58,6,0	1/1:4,4:8:23.99:226,24,0	1/1:0,4:4:12.02:122,12,0	1/1:6,2:8:17.81:148,18,0	0/0:23,0:23:69.24:0,69,1234	1/1:9,9:18:38.68:399,39,0	0/0:28,0:28:84.19:0,84,1383	1/1:5,12:17:45.29:419,45,0	0/0:22,0:22:63.13:0,63,1079	0/0:15,0:15:45.15:0,45,808	0/0:26,0:26:72.22:0,72,1244	1/1:2,6:8:15.33:183,15,0	1/1:6,3:9:9.31:76,9,0	1/1:9,4:13:20.87:172,21,0	1/1:7,3:10:20.99:187,21,0	0/0:21,0:21:56.41:0,56,965	0/0:17,0:17:51.16:0,51,865	0/0:6,0:6:18.06:0,18,304
chr10	90368537	.	GT	G	2031.71	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=12.263;DP=465;FS=16.864;HRun=1;HaplotypeScore=71.9011;InbreedingCoeff=0.9662;MQ=83.01;MQ0=1;MQRankSum=-2.709;QD=15.39;ReadPosRankSum=-5.256;VQSLOD=1.0835;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1623	0/0:9,0:9:27.06:0,27,350	0/0:23,0:23:60.64:0,61,842	0/0:27,0:26:35.95:0,36,655	1/1:8,0:8:14.60:110,15,0	0/0:23,0:23:66.20:0,66,912	0/0:27,0:27:78.10:0,78,974	0/0:21,0:21:60.17:0,60,804	1/1:13,0:13:27.74:216,28,0	1/1:3,6:9:14.99:132,15,0	1/1:9,1:10:6.48:48,6,0	1/1:8,0:8:23.93:199,24,0	1/1:4,0:4:11.99:105,12,0	1/1:7,1:8:17.73:141,18,0	0/0:23,0:23:69.23:0,69,984	1/1:17,1:18:41.35:379,41,0	0/0:28,0:28:84.18:0,84,1117	1/1:16,1:17:45.20:365,45,0	0/0:23,0:23:66.08:0,66,876	0/0:15,0:15:45.15:0,45,642	0/0:26,0:26:72.20:0,72,983	1/1:7,0:7:20.86:159,21,0	1/1:4,4:8:9.32:63,9,0	1/1:12,1:13:22.73:154,23,0	1/1:9,0:9:23.83:187,24,0	0/0:23,0:23:59.77:0,60,794	0/0:17,0:17:51.14:0,51,687	0/0:6,0:6:18.03:0,18,227
chr10	90371168	.	GCACA	G	1309.87	PASS	AB=0.890;AC=12;AF=0.214;AN=56;BaseQRankSum=7.173;DP=643;FS=3.405;HRun=0;HaplotypeScore=129.9530;InbreedingCoeff=0.7131;MQ=59.85;MQ0=19;MQRankSum=-4.367;QD=8.91;ReadPosRankSum=1.931;VQSLOD=3.0910;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:28:0.79:1,0,731	0/0:6,0:6:9.03:0,9,191	0/0:40,0:19:3.01:0,3,45	0/0:58,0:22:12.04:0,12,257	0/0:31,0:32:54.13:0,54,1057	0/0:18,0:23:23.28:0,23,365	0/0:25,0:27:32.62:0,33,683	0/0:21,0:23:36.57:0,37,613	0/0:17,0:19:35.59:0,36,742	1/1:12,14:26:42.14:670,42,0	1/1:12,5:17:12.04:189,12,0	0/0:14,0:16:26.81:0,27,519	0/0:13,0:13:24.08:0,24,555	0/0:12,0:12:15.52:0,16,359	0/0:13,0:20:9.03:0,9,157	1/1:19,8:28:30.08:432,30,0	0/0:24,0:29:20.28:0,20,334	1/1:11,2:13:8.55:143,9,0	0/0:12,0:11:17.80:0,18,372	0/0:12,0:14:23.82:0,24,512	0/0:42,0:42:44.48:0,44,778	0/0:21,0:22:50.90:0,51,1048	0/0:16,1:17:30.06:0,30,661	0/0:23,0:24:23.78:0,24,462	1/1:9,6:16:3:28,3,0	0/0:23,0:24:44.89:0,45,950	0/0:16,0:17:29.77:0,30,572	0/1:17,1:19:9.03:9,0,708
chr10	90371199	.	CACA	C	229.45	PASS	AB=0.946;AC=7;AF=0.125;AN=56;BaseQRankSum=9.551;DP=587;FS=0.633;HRun=0;HaplotypeScore=118.0928;InbreedingCoeff=0.1613;MQ=53.32;MQ0=9;MQRankSum=-2.456;QD=1.82;ReadPosRankSum=1.948;VQSLOD=2.2925;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:45.47:0,45,867	0/0:6,0:6:18.06:0,18,300	0/0:30,0:12:0.70:0,1,244	0/1:50,0:15:14.94:15,0,355	0/0:32,0:32:84.12:0,84,1390	0/0:18,0:18:38.60:0,39,555	0/0:17,0:17:39.21:0,39,769	0/0:32,0:31:82.82:0,83,1170	0/0:19,0:18:47.80:0,48,913	0/1:22,0:22:99:122,0,178	1/1:11,1:12:11.42:65,11,0	0/0:14,0:14:35.93:0,36,639	0/0:13,0:13:39.10:0,39,762	0/0:11,0:11:21.07:0,21,438	0/0:19,0:19:24.07:0,24,338	0/1:20,1:21:23.56:121,0,24	0/0:26,0:24:38.57:0,39,532	0/1:5,2:7:29.57:30,0,36	0/0:27,0:26:75.06:0,75,1067	0/0:16,0:16:38.94:0,39,743	0/0:38,0:37:69.20:0,69,1160	0/0:22,0:22:60.02:0,60,1174	0/0:14,0:14:36.08:0,36,751	0/0:17,0:17:26.81:0,27,520	0/1:14,0:14:2.44:2,0,49	0/0:27,0:27:72.01:0,72,1353	0/0:18,0:18:44.96:0,45,778	0/0:18,0:18:39.92:0,40,896
chr10	90371205	.	TTTTC	T	1580.34	PASS	AB=0.792;AC=10;AF=0.179;AN=56;BaseQRankSum=9.427;DP=580;FS=2.812;HRun=0;HaplotypeScore=117.7186;InbreedingCoeff=0.7768;MQ=55.21;MQ0=6;MQRankSum=-8.310;QD=14.24;ReadPosRankSum=0.085;VQSLOD=3.3972;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:69.60:0,70,1196	0/0:4,0:4:12.03:0,12,228	0/1:28,0:13:6.91:7,0,79	0/0:39,0:14:16.82:0,17,146	0/0:28,0:28:65.39:0,65,1242	0/0:17,0:17:42.11:0,42,781	0/0:18,0:18:39.05:0,39,720	0/0:28,0:28:57.14:0,57,1072	0/0:24,0:23:48.16:0,48,1118	1/1:14,10:24:56.87:670,57,0	1/1:4,9:13:4.22:58,4,0	0/0:18,0:18:47.79:0,48,896	0/0:17,0:16:33.08:0,33,684	0/0:13,0:13:30.02:0,30,561	0/0:20,0:19:51.05:0,51,1047	0/1:6,15:21:1.41:432,0,1	0/0:20,0:18:36.01:0,36,753	1/1:2,7:9:12:176,12,0	0/0:30,0:29:72.14:0,72,1210	0/0:17,0:17:39.07:0,39,693	0/0:29,0:29:48.13:0,48,928	0/0:19,0:19:36.08:0,36,631	0/0:13,0:13:32.60:0,33,385	0/0:18,0:18:33.98:0,34,625	1/1:2,14:16:24.03:396,24,0	0/0:28,0:28:50.13:0,50,1278	0/0:21,0:21:33.17:0,33,987	0/0:18,0:18:38.92:0,39,755
chr10	90373338	.	C	CT	283.31	PASS	AB=0.962;AC=13;AF=0.232;AN=56;BaseQRankSum=10.442;DP=595;FS=2.196;HRun=12;HaplotypeScore=93.5168;InbreedingCoeff=0.3063;MQ=68.62;MQ0=10;MQRankSum=-1.081;QD=1.45;ReadPosRankSum=1.860;VQSLOD=-0.6549;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:37:59.75:0,60,567	0/0:11,0:12:25.85:0,26,181	1/1:20,0:11:6.74:26,7,0	0/1:24,0:15:4.78:5,0,46	0/0:16,0:18:46.35:0,46,320	0/0:22,1:24:16.34:0,16,266	0/0:25,0:25:42.95:0,43,308	0/0:35,0:36:30.47:0,30,346	0/1:12,1:13:3.11:3,0,134	0/1:31,0:31:21.10:54,0,21	1/1:22,0:21:24.91:122,25,0	0/0:11,0:11:18.72:0,19,123	0/0:19,0:19:35.16:0,35,241	0/0:15,0:15:15.32:0,15,210	0/0:19,0:19:23.06:0,23,228	1/1:14,0:14:14.04:76,14,0	0/0:30,1:32:40.92:0,41,457	0/1:11,0:10:4.87:17,0,5	0/0:19,0:18:30.35:0,30,306	0/0:28,0:27:22.34:0,22,284	0/1:12,1:13:21.68:22,0,126	0/0:22,0:22:31.19:0,31,231	0/0:13,0:13:35.77:0,36,260	0/1:19,3:21:44.24:44,0,201	0/1:23,0:23:17.18:74,0,17	0/0:22,0:22:25.76:0,26,350	0/0:33,1:34:1.85:0,2,408	0/0:13,0:11:8.92:0,9,63
chr10	90373339	.	T	TC	1406.16	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.482;DP=581;FS=8.994;HRun=1;HaplotypeScore=85.6411;InbreedingCoeff=0.9849;MQ=68.33;MQ0=10;MQRankSum=-2.193;QD=15.45;ReadPosRankSum=3.152;VQSLOD=3.1057;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:94.72:0,95,1170	0/0:12,0:12:32.95:0,33,389	0/0:21,0:11:16.68:0,17,177	0/0:24,0:14:35.75:0,36,303	0/0:18,0:18:50.98:0,51,612	0/0:25,0:25:52.67:0,53,642	0/0:22,0:22:54.11:0,54,653	0/0:36,0:36:35.29:0,35,920	0/0:13,0:13:28.77:0,29,374	1/1:5,13:27:53.93:419,54,0	1/1:3,13:19:41.71:359,42,0	0/0:11,0:11:30.01:0,30,338	0/0:19,0:19:56.92:0,57,622	0/0:15,0:15:36.53:0,37,465	0/0:19,0:19:53.52:0,54,594	1/1:4,9:13:29.79:259,30,0	0/0:32,0:32:73.39:0,73,940	1/1:7,4:10:11.93:137,12,0	0/0:18,1:18:26.75:0,27,554	0/0:28,0:27:69.55:0,70,804	0/0:13,0:13:23.37:0,23,334	0/0:22,0:22:66.01:0,66,700	0/0:13,0:13:36.12:0,36,497	0/0:22,0:21:37.53:0,38,516	1/1:8,12:20:41.33:404,41,0	0/0:22,1:23:32.63:0,33,760	0/0:34,0:34:87.67:0,88,1079	0/0:10,0:8:15.02:0,15,171
chr10	90373340	.	T	TCTC	2218.72	PASS	AB=0.692;AC=9;AF=0.161;AN=56;BaseQRankSum=10.168;DP=581;FS=11.377;HRun=0;HaplotypeScore=103.8149;InbreedingCoeff=0.8677;MQ=67.48;MQ0=10;MQRankSum=-2.582;QD=24.12;ReadPosRankSum=2.211;VQSLOD=3.2976;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:99:0,107,1770	0/0:12,0:12:36.08:0,36,604	0/0:21,0:11:6.09:0,6,292	0/0:23,0:13:32.83:0,33,401	0/0:18,0:18:51.12:0,51,847	0/0:26,0:26:62.56:0,63,1005	0/0:22,0:22:63.05:0,63,953	0/0:35,0:35:94.98:0,95,1452	0/0:13,0:13:36.11:0,36,612	0/1:15,12:27:0.62:488,0,1	1/1:7,13:19:29.93:554,30,0	0/0:12,0:12:30.06:0,30,500	0/0:19,0:19:57.12:0,57,924	0/0:15,0:15:38.03:0,38,658	0/0:19,0:19:53.78:0,54,777	1/1:5,9:14:18.70:436,19,0	0/0:32,0:32:78.11:0,78,1369	1/1:7,4:10:5.66:199,6,0	0/0:21,0:20:54.10:0,54,852	0/0:27,0:26:72.15:0,72,1180	0/0:12,0:12:30.06:0,30,497	0/0:21,0:21:63.12:0,63,1015	0/0:14,0:14:39.09:0,39,691	0/0:21,0:20:54.16:0,54,886	1/1:8,12:20:33.49:700,33,0	0/0:22,1:23:12.78:0,13,997	0/0:34,0:34:98.15:0,98,1592	0/0:8,0:6:15.01:0,15,215
chr10	90374433	.	TTTTTTG	T	2927.85	PASS	AB=0.947;AC=11;AF=0.196;AN=56;BaseQRankSum=10.893;DP=620;FS=19.494;HRun=0;HaplotypeScore=130.6323;InbreedingCoeff=0.8791;MQ=68.53;MQ0=3;MQRankSum=-10.598;QD=28.70;ReadPosRankSum=-1.551;VQSLOD=1.6503;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:75.17:0,75,2241	0/0:11,0:11:21.06:0,21,602	0/0:21,0:17:17.66:0,18,545	0/0:24,0:22:20.28:0,20,517	0/0:21,0:21:39.13:0,39,1206	0/0:24,0:24:48.16:0,48,1559	0/0:23,0:23:54.18:0,54,1741	0/0:33,0:33:63.15:0,63,1808	0/0:25,0:25:57.20:0,57,1839	1/1:10,18:28:57.20:1173,57,0	1/1:7,7:14:24.04:427,24,0	0/0:23,0:23:54.18:0,54,1685	0/0:15,0:15:36.12:0,36,1131	0/0:20,0:20:51.12:0,51,1471	0/0:23,0:23:51.17:0,51,1619	1/1:4,7:11:18.06:370,18,0	0/0:36,0:36:75.23:0,75,2306	1/1:8,6:14:18.06:370,18,0	0/0:19,0:18:33.11:0,33,1044	0/0:18,0:18:48.16:0,48,1529	0/0:32,0:32:66.22:0,66,2005	0/0:15,0:15:30.10:0,30,925	0/0:13,0:13:33.11:0,33,1071	0/0:36,0:36:81.28:0,81,2632	1/1:5,12:17:36.12:740,36,0	0/1:17,1:18:25.61:26,0,952	0/0:31,0:31:75.23:0,75,2348	0/0:18,0:18:42.14:0,42,1262
chr10	90374742	.	AT	A	2067.43	PASS	AB=0.909;AC=11;AF=0.196;AN=56;BaseQRankSum=9.373;DP=573;FS=1.869;HRun=10;HaplotypeScore=54.4012;InbreedingCoeff=0.8406;MQ=64.02;MQ0=2;MQRankSum=-1.796;QD=16.41;ReadPosRankSum=2.252;VQSLOD=4.0568;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:93.08:0,93,1001	0/1:9,1:10:0.77:1,0,195	0/0:7,0:7:16.51:0,17,154	0/0:11,0:7:15:0,15,148	0/0:26,2:28:17.05:0,17,627	0/0:24,0:24:63.16:0,63,687	0/0:16,0:16:36.08:0,36,389	0/0:31,0:31:78.20:0,78,855	0/0:14,0:16:41.71:0,42,407	1/1:8,24:31:68.95:598,69,0	1/1:5,18:23:26.39:437,26,0	0/0:15,0:16:47.96:0,48,512	0/0:11,0:11:24.06:0,24,265	0/0:17,0:17:22.08:0,22,464	0/0:13,0:13:36.10:0,36,398	1/1:0,13:13:35.99:313,36,0	0/0:42,0:42:99:0,120,1326	1/1:3,27:30:71.88:625,72,0	0/0:12,1:12:3.87:0,4,252	0/0:24,0:24:63.16:0,63,689	0/0:22,0:22:66.17:0,66,722	0/0:15,0:16:45.06:0,45,482	0/0:14,0:14:1.04:0,1,240	0/0:23,0:23:69.16:0,69,745	1/1:1,16:18:31.81:265,32,0	0/0:29,0:29:46.04:0,46,720	0/0:28,1:29:55.17:0,55,814	0/0:12,1:13:10.04:0,10,338
chr10	90375055	.	AC	A	2536.19	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.456;DP=702;FS=5.232;HRun=3;HaplotypeScore=68.0272;InbreedingCoeff=0.9939;MQ=91.70;MQ0=0;MQRankSum=-0.425;QD=36.23;ReadPosRankSum=2.162;VQSLOD=4.4444;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,2322	1/1:0,7:7:17.66:244,18,0	0/0:30,0:30:76.87:0,77,1250	0/0:30,0:29:46.47:0,46,1135	0/0:25,0:25:75.26:0,75,1195	0/0:24,0:24:72.25:0,72,1151	0/0:29,0:29:84.27:0,84,1310	0/0:26,0:26:78.27:0,78,1243	0/0:21,0:21:63.21:0,63,1005	0/0:38,0:37:99:0,111,1753	0/0:17,0:17:51.17:0,51,813	0/0:20,0:20:60.20:0,60,959	0/0:29,0:29:84.27:0,84,1317	0/0:27,0:27:81.26:0,81,1270	1/1:0,36:36:99:1427,102,0	0/0:25,0:25:75.23:0,75,1171	1/1:0,27:27:72.24:1007,72,0	0/0:21,0:21:63.19:0,63,982	0/0:25,0:25:75.26:0,75,1198	0/0:26,0:26:78.24:0,78,1200	0/0:25,0:25:75.24:0,75,1175	0/0:25,0:25:72.25:0,72,1143	0/0:12,0:12:36.12:0,36,576	0/0:21,0:21:63.20:0,63,980	0/0:27,0:27:81.28:0,81,1295	0/0:23,0:23:69.24:0,69,1104	0/0:30,0:30:90.26:0,90,1361	0/0:6,0:6:18.06:0,18,288
chr10	90375449	.	TG	T	1934.70	PASS	AB=0.913;AC=11;AF=0.196;AN=56;BaseQRankSum=8.350;DP=479;FS=2.130;HRun=8;HaplotypeScore=50.7422;InbreedingCoeff=0.9126;MQ=70.91;MQ0=3;MQRankSum=1.215;QD=16.82;ReadPosRankSum=4.177;VQSLOD=3.5173;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.23:0,84,991	0/0:10,0:10:27.08:0,27,321	0/0:16,0:12:23.27:0,23,240	0/0:17,0:12:15.56:0,16,219	0/0:15,0:15:39.10:0,39,454	0/0:20,1:21:31.22:0,31,659	0/0:20,0:20:48.13:0,48,565	0/0:21,0:21:48.11:0,48,552	0/0:12,0:12:33.10:0,33,398	1/1:2,12:14:33.02:311,33,0	1/1:1,19:19:45.06:435,45,0	0/0:17,0:16:48.15:0,48,579	0/0:12,0:12:30.07:0,30,340	0/0:11,0:11:27.08:0,27,325	0/0:13,0:13:33.10:0,33,399	1/1:3,15:17:36.02:348,36,0	0/0:26,0:26:78.23:0,78,925	1/1:0,19:19:54.09:521,54,0	0/0:21,0:21:48.11:0,48,564	0/0:14,0:14:33.10:0,33,397	0/0:27,0:27:78.24:0,78,938	0/0:9,0:9:24.07:0,24,289	0/0:12,0:12:33.10:0,33,398	0/0:14,0:13:36.11:0,36,435	1/1:4,19:23:51.08:492,51,0	0/1:18,2:21:3.97:4,0,494	0/0:15,0:15:42.13:0,42,507	0/0:10,0:10:30.09:0,30,362
chr10	90375773	.	GA	G	1456.55	PASS	AB=0.776;AC=16;AF=0.286;AN=56;BaseQRankSum=8.161;DP=565;FS=6.775;HRun=12;HaplotypeScore=69.2756;InbreedingCoeff=0.8010;MQ=62.82;MQ0=7;MQRankSum=2.332;QD=7.67;ReadPosRankSum=5.468;VQSLOD=2.0966;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:31:56.94:0,57,737	1/1:1,0:9:14.26:42,14,0	0/0:38,1:15:0.59:0,1,59	0/1:35,0:13:10.36:10,0,31	0/0:19,0:19:42.08:0,42,422	0/0:17,0:17:42.07:0,42,420	0/0:18,1:20:27.42:0,27,422	0/0:30,0:27:66.98:0,67,660	0/0:12,0:12:33.05:0,33,327	1/1:3,16:18:14.38:294,14,0	1/1:3,18:24:23:333,23,0	0/0:15,0:15:39.06:0,39,384	0/0:13,0:13:26.08:0,26,250	0/0:15,0:15:24.04:0,24,238	1/1:3,0:16:20.36:59,20,0	0/1:3,13:15:0.67:179,0,1	1/1:5,0:32:30.33:87,30,0	1/1:4,23:27:60.97:484,61,0	0/0:24,0:20:44.74:0,45,416	0/0:14,0:13:36.07:0,36,364	0/0:8,0:10:3.56:0,4,188	0/0:17,0:17:36.07:0,36,365	0/0:18,0:20:31.37:0,31,460	0/0:17,2:19:27.85:0,28,457	1/1:1,11:12:20.92:163,21,0	0/0:25,0:27:65.59:0,66,620	0/0:21,0:21:53.87:0,54,508	0/0:6,0:6:14.83:0,15,121
chr10	90376703	.	GAC	G	267.13	PASS	AB=0.927;AC=17;AF=0.370;AN=46;BaseQRankSum=2.329;DP=383;FS=1.112;HRun=0;HaplotypeScore=49.3985;InbreedingCoeff=-0.0929;MQ=67.65;MQ0=7;MQRankSum=1.400;QD=1.62;ReadPosRankSum=1.490;VQSLOD=1.1750;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,1:22:34.90:45,0,35	1/1:3,1:4:3.01:32,3,0	./.	./.	0/1:12,0:13:2.92:3,0,55	0/1:14,0:16:8.38:8,0,121	0/0:20,0:20:6.02:0,6,88	./.	0/1:9,1:10:19.86:20,0,120	0/0:12,0:11:20.98:0,21,216	./.	0/0:9,0:9:6.01:0,6,69	./.	0/0:6,2:8:2.84:0,3,44	1/1:10,0:10:0.47:1,0,0	0/1:3,1:10:22.89:23,0,43	1/1:17,3:23:14.54:106,15,0	0/0:10,0:13:6.01:0,6,68	0/0:13,0:13:6.01:0,6,70	0/0:7,0:7:3.01:0,3,40	0/0:30,0:30:5.55:0,6,86	0/0:9,0:9:5.95:0,6,56	0/1:9,0:9:12.98:13,0,79	0/1:20,3:22:45.75:46,0,138	0/0:7,0:7:3:0,3,27	0/1:8,0:8:21.17:21,0,38	0/1:10,3:13:51.77:52,0,57	1/1:0,1:1:3.01:32,3,0
chr10	90378263	.	C	CT	1521.85	PASS	AB=0.565;AC=5;AF=0.089;AN=56;BaseQRankSum=-7.947;DP=632;FS=4.061;HRun=10;HaplotypeScore=58.4981;InbreedingCoeff=0.7744;MQ=59.42;MQ0=2;MQRankSum=0.122;QD=20.29;ReadPosRankSum=3.171;VQSLOD=4.7231;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,115,932	1/1:1,11:13:35.89:355,36,0	0/0:30,0:10:15.92:0,16,115	0/0:30,0:6:1.34:0,1,24	0/0:30,2:32:39.89:0,40,531	0/0:11,0:11:23.96:0,24,197	0/0:13,0:12:32.94:0,33,271	0/0:20,0:20:28.97:0,29,225	0/0:19,0:19:44.93:0,45,369	0/0:31,0:31:77.85:0,78,635	0/0:23,0:23:58.96:0,59,474	0/0:13,0:13:34.76:0,35,273	0/0:17,0:17:44.93:0,45,366	0/0:10,0:12:22.05:0,22,160	0/1:6,20:26:1.03:484,0,1	0/0:22,1:24:52.95:0,53,424	1/1:4,31:36:78.03:812,78,0	0/0:24,0:24:56.92:0,57,468	0/0:26,1:27:23.73:0,24,391	0/0:29,0:30:67.89:0,68,544	0/0:13,0:13:26.96:0,27,222	0/0:13,0:13:26.95:0,27,221	0/0:23,0:24:61.96:0,62,498	0/0:12,0:14:36.94:0,37,274	0/0:29,0:28:71.88:0,72,591	0/0:26,0:27:52.81:0,53,408	0/0:30,0:30:74.87:0,75,615	0/0:5,0:5:5.99:0,6,49
chr10	90380248	.	TAC	T	1756.58	PASS	AB=0.902;AC=25;AF=0.446;AN=56;BaseQRankSum=9.163;DP=429;FS=3.401;HRun=0;HaplotypeScore=68.6228;InbreedingCoeff=0.4821;MQ=73.23;MQ0=8;MQRankSum=-3.831;QD=7.91;ReadPosRankSum=2.947;VQSLOD=3.2411;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,10:20:13.79:207,14,0	1/1:1,2:3:6.02:71,6,0	0/0:35,0:19:14.98:0,15,199	0/0:34,0:22:26.26:0,26,277	0/1:13,2:14:34.99:35,0,439	0/1:12,2:14:40.98:41,0,350	0/1:9,1:10:11.48:11,0,305	0/0:27,0:26:21.16:0,21,493	0/0:9,0:9:27.06:0,27,402	1/1:4,0:12:17.16:89,17,0	1/1:0,0:11:11.36:56,11,0	0/0:8,1:8:24.08:0,24,380	0/0:6,0:6:15.05:0,15,237	0/0:11,0:11:24.06:0,24,349	1/1:4,9:12:33.09:380,33,0	1/1:1,0:6:14.20:70,14,0	1/1:4,22:26:56.88:684,57,0	1/1:9,0:13:11.83:58,12,0	0/1:15,2:15:69.57:70,0,358	0/0:19,0:19:51.17:0,51,806	0/0:25,0:26:33.25:0,33,777	0/0:7,0:7:18.06:0,18,285	0/1:7,2:9:14.48:14,0,264	0/0:10,0:10:21.06:0,21,309	1/1:4,0:22:31.36:159,31,0	0/1:14,1:15:6.53:7,0,357	0/0:13,0:13:28.91:0,29,433	0/1:14,0:14:8.39:8,0,327
chr10	90380308	.	TAC	T	1201.35	PASS	AB=0.955;AC=11;AF=0.212;AN=52;BaseQRankSum=3.913;DP=523;FS=1.256;HRun=0;HaplotypeScore=89.1938;InbreedingCoeff=0.3544;MQ=56.01;MQ0=6;MQRankSum=1.254;QD=6.36;ReadPosRankSum=4.062;VQSLOD=2.5034;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:65.35:0,65,979	1/1:2,4:6:5.81:69,6,0	./.	./.	0/0:15,0:15:27.32:0,27,361	0/0:20,0:21:7.70:0,8,514	0/1:21,2:22:56.32:56,0,463	0/0:35,0:34:49.66:0,50,674	0/0:10,0:9:15.05:0,15,224	0/0:12,0:15:23.14:0,23,183	0/0:13,0:17:19.08:0,19,159	0/0:8,0:8:20.56:0,21,281	0/0:11,0:11:27.08:0,27,396	0/0:11,0:11:0.13:0,0,400	1/1:8,11:20:35.94:397,36,0	0/0:8,0:11:10.97:0,11,99	1/1:20,12:30:65.53:725,66,0	0/0:1,0:14:24:0,24,210	0/1:20,1:21:42.91:43,0,227	0/0:18,0:18:24.08:0,24,364	0/1:58,3:62:28.19:28,0,1560	0/0:12,0:12:20.65:0,21,212	0/0:7,0:7:18.06:0,18,277	0/0:17,0:17:42.14:0,42,648	0/0:16,0:21:26.56:0,27,266	0/1:15,1:17:32.45:32,0,304	0/0:10,0:10:15.03:0,15,206	0/1:8,0:8:2.96:3,0,145
chr10	90380543	.	CA	C	3456.28	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.163;DP=625;FS=0.000;HRun=5;HaplotypeScore=63.2317;InbreedingCoeff=0.9988;MQ=74.61;MQ0=0;MQRankSum=-2.403;QD=30.05;ReadPosRankSum=0.685;VQSLOD=4.0229;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,1845	0/0:9,0:9:27.06:0,27,347	0/0:16,0:16:34.80:0,35,395	0/0:11,0:12:29.92:0,30,318	0/0:23,0:23:66.22:0,66,902	0/0:20,0:20:60.20:0,60,821	0/0:18,0:18:51.17:0,51,696	0/0:31,0:31:81.27:0,81,1106	0/0:27,0:27:81.27:0,81,1108	1/1:2,22:24:63.15:700,63,0	1/1:0,25:25:66.19:749,66,0	0/0:20,0:20:60.19:0,60,807	0/0:10,0:10:24.07:0,24,312	0/0:23,0:23:69.20:0,69,912	0/0:28,0:28:81.27:0,81,1108	1/1:0,30:30:87.25:987,87,0	0/0:25,0:25:72.23:0,72,966	1/1:0,21:21:57.16:647,57,0	0/0:25,0:25:69.21:0,69,921	0/0:22,0:22:66.21:0,66,883	0/0:30,0:30:84.28:0,84,1149	0/0:21,0:21:63.21:0,63,859	0/0:17,0:17:48.16:0,48,653	0/0:15,0:15:45.11:0,45,594	1/1:0,15:15:33.09:374,33,0	0/0:37,0:37:99:0,108,1462	0/0:22,0:22:66.22:0,66,901	0/0:11,0:11:27.07:0,27,338
chr10	90381846	.	A	AG	2093.12	PASS	AC=40;AF=0.909;AN=44;BaseQRankSum=-3.283;DP=82;FS=6.629;HRun=1;HaplotypeScore=9.0723;InbreedingCoeff=0.2822;MQ=59.67;MQ0=7;MQRankSum=-0.623;QD=33.76;ReadPosRankSum=0.758;VQSLOD=2.5061;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:12.04:179,12,0	./.	0/0:6,0:1:3.01:0,3,37	0/0:9,0:4:9.01:0,9,101	1/1:1,3:4:6.02:90,6,0	1/1:0,2:2:6.02:90,6,0	1/1:0,2:2:6.02:90,6,0	./.	1/1:0,2:2:3.01:45,3,0	./.	1/1:0,2:1:3.01:45,3,0	1/1:0,2:2:6.02:90,6,0	./.	1/1:0,2:2:3.01:45,3,0	1/1:0,3:3:9.03:135,9,0	1/1:0,2:2:6.02:90,6,0	1/1:0,2:2:3.01:45,3,0	./.	./.	1/1:0,2:2:3.01:45,3,0	1/1:0,5:4:12.04:180,12,0	1/1:0,3:3:6.02:90,6,0	1/1:0,2:2:3.01:45,3,0	1/1:0,3:3:6.02:90,6,0	1/1:0,2:2:6.02:90,6,0	1/1:1,4:5:12.04:180,12,0	1/1:0,10:10:30.10:449,30,0	1/1:0,2:2:6.02:90,6,0
chr10	90382463	.	ATG	A	2627.30	PASS	AB=0.944;AC=11;AF=0.196;AN=56;BaseQRankSum=11.812;DP=869;FS=0.000;HRun=0;HaplotypeScore=180.5661;InbreedingCoeff=0.9194;MQ=49.10;MQ0=43;MQRankSum=-0.388;QD=21.54;ReadPosRankSum=3.342;VQSLOD=4.0442;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:51:99:0,102,1647	0/0:8,0:8:24.08:0,24,385	0/0:49,0:27:51.65:0,52,1027	0/0:58,0:23:58.59:0,59,820	0/1:16,1:17:1.74:2,0,511	0/0:27,0:26:42.14:0,42,697	0/0:27,2:27:28.41:0,28,1004	0/0:42,2:43:38.66:0,39,1688	0/0:27,1:28:25.35:0,25,946	1/1:5,29:34:84.26:1048,84,0	1/1:1,16:17:36.12:454,36,0	0/0:38,0:38:37.40:0,37,1152	0/0:15,0:14:27.01:0,27,389	0/0:26,2:28:22.34:0,22,883	0/0:49,0:48:81.27:0,81,1322	1/1:1,16:17:33.11:416,33,0	0/0:34,1:34:47.31:0,47,1309	1/1:2,19:19:48.15:606,48,0	0/0:18,1:18:13.31:0,13,760	0/0:23,1:24:28.37:0,28,1001	0/0:84,0:82:99:0,229,3713	0/0:29,0:29:54.18:0,54,895	0/0:23,0:22:57.19:0,57,908	0/0:44,1:43:99:0,102,1647	1/1:1,14:16:23.89:276,24,0	0/0:32,0:30:84.29:0,84,1396	0/0:24,0:24:48.16:0,48,792	0/0:5,0:5:15.05:0,15,249
chr10	90383824	.	GGT	G	3233.06	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.957;DP=598;FS=8.007;HRun=0;HaplotypeScore=67.6939;InbreedingCoeff=0.9972;MQ=72.74;MQ0=2;MQRankSum=-2.976;QD=40.41;ReadPosRankSum=1.219;VQSLOD=5.1088;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.29:0,84,1690	1/1:0,8:8:24.08:391,24,0	0/0:11,0:11:33.10:0,33,613	0/0:15,0:15:38.90:0,39,676	0/0:19,0:19:57.17:0,57,1103	0/0:18,0:18:54.17:0,54,1060	0/0:24,0:24:69.24:0,69,1387	0/0:20,0:20:57.18:0,57,1072	0/0:21,0:21:63.19:0,63,1207	0/0:16,0:16:48.16:0,48,975	0/0:12,0:12:33.11:0,33,656	0/0:30,0:30:90.31:0,90,1814	0/0:14,0:14:42.14:0,42,823	0/0:29,0:29:87.29:0,87,1712	1/1:0,35:35:96.33:1566,96,0	0/0:29,0:29:87.30:0,87,1766	1/1:1,36:35:87.30:1419,87,0	0/0:27,0:27:81.28:0,81,1640	0/0:17,0:17:51.17:0,51,1014	0/0:16,0:16:48.16:0,48,973	0/0:41,0:41:99:0,123,2394	0/0:12,0:12:36.11:0,36,695	0/0:9,0:9:27.07:0,27,497	0/0:26,0:26:78.27:0,78,1526	0/0:22,0:22:66.20:0,66,1252	0/0:29,0:29:87.28:0,87,1696	0/0:25,0:25:75.26:0,75,1485	0/0:7,0:7:21.07:0,21,426
chr10	90384791	.	G	GA	773.67	PASS	AB=0.969;AC=23;AF=0.411;AN=56;BaseQRankSum=1.845;DP=589;FS=3.829;HRun=13;HaplotypeScore=157.7641;InbreedingCoeff=0.1104;MQ=51.15;MQ0=17;MQRankSum=-0.072;QD=2.26;ReadPosRankSum=-1.469;VQSLOD=0.5297;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:31.77:0,32,145	1/1:8,0:8:3.79:31,4,0	0/0:31,0:7:13.95:0,14,76	0/0:37,0:8:1.37:0,1,18	0/1:28,0:27:16.06:16,0,59	0/1:10,1:10:25.97:34,0,26	0/0:24,0:24:2.44:0,2,74	0/1:30,1:30:64.36:78,0,64	0/0:17,0:16:4.68:0,5,23	1/1:39,0:37:22.91:169,23,0	1/1:17,0:16:10.49:76,10,0	0/1:24,0:22:2.26:2,0,12	0/0:13,0:13:16.02:0,16,52	0/0:20,0:18:14.10:0,14,58	0/1:15,0:15:3.95:15,0,4	1/1:27,0:26:3.54:107,4,0	0/0:29,0:29:5.37:0,5,33	1/1:18,0:16:30.16:143,30,0	0/1:27,0:24:18.48:18,0,40	0/1:16,2:18:42.18:43,0,42	0/1:4,0:4:1.47:1,0,11	0/1:16,0:16:15.62:16,0,42	0/0:17,0:17:28.16:0,28,134	0/1:17,1:18:15.05:28,0,15	1/1:15,0:14:23.70:109,24,0	0/1:24,1:25:28.04:58,0,28	0/0:18,0:16:18.10:0,18,78	0/0:4,0:3:2.99:0,3,13
chr10	90384804	.	AG	A	6079.02	PASS	AB=0.846;AC=48;AF=0.857;AN=56;BaseQRankSum=-0.363;DP=572;FS=12.844;HRun=1;HaplotypeScore=150.9374;InbreedingCoeff=0.3159;MQ=56.03;MQ0=14;MQRankSum=3.576;QD=12.41;ReadPosRankSum=-2.718;VQSLOD=1.9480;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:34:30.31:296,30,0	1/1:0,6:7:17.88:156,18,0	0/0:39,0:13:18.33:0,18,126	0/0:43,0:11:1.26:0,1,25	1/1:24,2:28:32.25:344,32,0	1/1:10,0:9:6.62:54,7,0	1/1:21,0:21:11.31:163,11,0	1/1:22,1:29:21.35:281,21,0	0/1:12,0:14:4:98,0,4	1/1:10,22:35:58.85:762,59,0	1/1:6,8:15:37.98:349,38,0	1/1:17,2:20:15.75:216,16,0	1/1:11,0:14:0.28:98,0,0	0/1:12,0:14:5.82:28,0,6	1/1:9,4:15:28.51:269,29,0	1/1:5,16:21:52.53:507,53,0	1/1:22,4:28:51.02:491,51,0	1/1:8,10:18:47.85:451,48,0	1/1:18,2:23:36.49:312,36,0	1/1:14,0:19:9.74:117,10,0	0/1:4,0:5:1.64:2,0,2	1/1:14,0:14:26.15:182,26,0	0/1:13,1:15:17.33:35,0,17	1/1:12,1:15:10.82:67,11,0	1/1:4,10:16:44.90:432,45,0	1/1:17,1:21:31.92:255,32,0	1/1:16,0:16:2.15:89,2,0	1/1:4,0:3:2.39:23,2,0
chr10	90384806	.	AG	A	4669.72	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=0.173;DP=564;FS=12.252;HRun=2;HaplotypeScore=156.3332;InbreedingCoeff=-0.0134;MQ=56.36;MQ0=12;MQRankSum=1.192;QD=8.95;ReadPosRankSum=-3.125;VQSLOD=0.7292;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:33:9.12:232,9,0	1/1:7,0:7:14.81:125,15,0	0/0:38,0:13:2.34:0,2,215	0/1:42,0:11:5.89:6,0,22	1/1:26,0:28:21.53:293,22,0	1/1:10,0:9:1.24:43,1,0	0/1:21,0:21:11.94:120,0,12	1/1:28,0:28:10.56:248,11,0	1/1:15,0:14:8.85:102,9,0	1/1:20,15:32:85.17:550,85,0	1/1:7,7:15:32.79:221,33,0	0/1:22,0:20:6.40:181,0,6	0/1:14,0:14:10.30:79,0,10	0/1:16,0:15:25.29:34,0,25	1/1:15,0:15:23.06:235,23,0	1/1:10,11:21:49.45:297,49,0	1/1:27,0:28:47.42:455,47,0	1/1:10,10:18:39.63:250,40,0	1/1:23,1:23:18.21:273,18,0	0/1:20,0:20:11.12:111,0,11	0/0:3,0:4:2.30:0,2,8	1/1:14,0:14:20.56:160,21,0	0/1:14,0:14:27.36:27,0,43	0/1:15,0:15:4.52:39,0,5	1/1:8,8:16:42.16:267,42,0	1/1:21,0:21:26.36:241,26,0	0/1:18,0:16:22.84:64,0,23	1/1:4,0:3:1.14:18,1,0
chr10	90384813	.	G	GA	3521.30	PASS	AB=0.979;AC=22;AF=0.393;AN=56;BaseQRankSum=-6.303;DP=596;FS=96.578;HRun=4;HaplotypeScore=175.0993;InbreedingCoeff=0.0892;MQ=57.79;MQ0=10;MQRankSum=-3.841;QD=8.63;ReadPosRankSum=-2.565;VQSLOD=-0.6705;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:35,2:36:14.19:14,0,216	0/0:7,0:7:10.18:0,10,69	0/1:38,0:15:33.35:33,0,59	0/1:38,0:10:8.07:8,0,39	0/0:28,0:27:16.48:0,16,145	0/1:13,0:12:11.76:12,0,82	0/0:24,0:24:47.14:0,47,275	0/0:30,1:31:2.07:0,2,144	0/0:18,0:17:32.39:0,32,193	1/1:11,26:34:84.16:1036,84,0	1/1:3,13:16:39.07:478,39,0	0/0:23,0:21:36.20:0,36,200	0/1:15,0:15:24.47:24,0,57	0/1:14,1:15:14.04:14,0,76	0/0:15,0:15:10.07:0,10,77	1/1:4,18:22:53.10:589,53,0	0/1:26,1:27:17.04:17,0,157	1/1:7,15:20:53.90:632,54,0	0/1:25,0:23:24.46:24,0,66	0/1:22,1:23:29.64:30,0,102	0/0:6,0:6:6.04:0,6,36	0/0:15,0:15:24.03:0,24,125	0/0:14,0:14:16:0,16,105	0/1:17,0:17:27.87:28,0,69	1/1:3,14:17:44.77:533,45,0	0/1:26,1:26:45.61:46,0,143	0/1:17,0:15:2.51:3,0,97	0/0:7,0:6:12.32:0,12,92
chr10	90386062	.	T	TGGTTG	818.12	PASS	AB=0.746;AC=5;AF=0.089;AN=56;BaseQRankSum=3.342;DP=548;FS=15.453;HRun=0;HaplotypeScore=107.5165;InbreedingCoeff=-0.1086;MQ=44.22;MQ0=44;MQRankSum=-1.686;QD=8.80;ReadPosRankSum=2.413;VQSLOD=1.2187;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:72.33:0,72,1236	0/0:9,0:9:24.07:0,24,421	0/0:58,0:7:3.63:0,4,57	0/0:55,0:12:22.79:0,23,220	0/0:27,0:26:65.71:0,66,1284	0/0:14,0:12:30.07:0,30,583	0/0:17,0:17:42.14:0,42,812	0/0:26,0:26:66.19:0,66,1221	0/0:17,0:17:33.54:0,34,546	0/1:18,8:30:99:388,0,661	0/1:12,2:13:30:30,0,420	0/0:9,0:9:27.09:0,27,530	0/0:12,0:10:23.29:0,23,409	0/0:5,0:5:15.04:0,15,246	0/0:14,0:14:35.98:0,36,508	0/1:9,2:11:99:119,0,257	0/0:35,0:30:75.02:0,75,1105	0/1:7,3:8:99:115,0,120	0/0:25,0:19:57.20:0,57,1133	0/0:14,0:14:41.17:0,41,765	0/0:9,0:8:21.07:0,21,396	0/0:7,0:7:15.05:0,15,290	0/0:16,0:16:39.12:0,39,755	0/0:8,0:7:9.66:0,10,210	0/1:12,9:20:99:283,0,392	0/0:19,0:18:51.17:0,51,938	0/0:14,0:13:33.58:0,34,654	0/0:15,0:14:42.09:0,42,760
chr10	90387315	.	TACACAC	T	185.43	PASS	AB=1.000;AC=11;AF=0.550;AN=20;BaseQRankSum=-0.212;DP=196;FS=3.590;HRun=0;HaplotypeScore=52.9822;InbreedingCoeff=0.3089;MQ=29.05;MQ0=18;MQRankSum=-2.646;QD=4.64;ReadPosRankSum=1.905;VQSLOD=1.3661;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:5.95:0,6,59	0/0:3,0:3:2.98:0,3,21	./.	./.	./.	./.	./.	./.	1/1:2,0:2:2.97:20,3,0	./.	./.	0/0:9,0:5:0:0,0,0	./.	./.	./.	./.	0/1:6,0:4:5.47:5,0,125	0/0:5,0:4:3.01:0,3,63	1/1:8,2:9:9.01:136,9,0	./.	./.	./.	./.	./.	./.	1/1:13,1:14:3.62:74,4,0	1/1:5,0:5:2.98:21,3,0	1/1:3,0:2:2.98:21,3,0
chr10	90390209	.	CCCTCCCTT	C	2349.51	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.614;DP=562;FS=35.232;HRun=0;HaplotypeScore=128.6194;InbreedingCoeff=0.9456;MQ=54.56;MQ0=10;MQRankSum=-5.828;QD=30.51;ReadPosRankSum=0.051;VQSLOD=1.5458;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:77.06:0,77,3026	0/0:10,0:10:29.81:0,30,439	0/0:33,0:11:26.54:0,27,246	0/0:25,0:16:32.05:0,32,362	0/0:18,0:17:48.10:0,48,1376	0/0:18,0:18:53.63:0,54,1239	0/0:17,0:17:47.88:0,48,1571	0/0:26,0:23:65.92:0,66,764	0/0:17,0:17:50.49:0,50,1497	1/1:1,17:17:51.04:898,51,0	1/1:0,11:12:20.94:436,21,0	0/0:14,0:14:42.10:0,42,1432	0/0:18,0:18:53.91:0,54,1565	0/0:14,0:14:39.06:0,39,977	0/0:27,0:27:69.07:0,69,1474	1/1:0,18:18:11.95:336,12,0	0/0:27,0:27:74.70:0,75,1394	1/1:1,11:12:3.01:85,3,0	0/0:32,0:31:80.84:0,81,2324	0/0:20,0:20:53.92:0,54,1450	0/0:16,0:16:15.75:0,16,1581	0/0:15,0:15:42.05:0,42,1355	0/0:13,0:13:38.93:0,39,1169	0/0:26,0:26:74.91:0,75,1769	1/1:0,17:17:27.09:759,27,0	0/0:14,0:14:39.10:0,39,1248	0/0:19,0:19:54.14:0,54,1785	0/0:25,0:25:68.93:0,69,1532
chr10	90390213	.	C	CCCTTCCTT	1250.35	PASS	AC=6;AF=0.120;AN=50;BaseQRankSum=-0.784;DP=559;FS=3.749;HRun=0;HaplotypeScore=133.0904;InbreedingCoeff=0.8368;MQ=53.35;MQ0=12;MQRankSum=-3.482;QD=19.24;ReadPosRankSum=-0.671;VQSLOD=3.0885;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:56.78:0,57,1333	1/1:10,0:10:3.01:94,3,0	./.	./.	0/0:17,0:16:30.09:0,30,648	0/0:17,0:17:24.06:0,24,473	0/0:21,0:21:12.16:0,12,515	./.	0/0:17,0:18:33.09:0,33,702	0/0:18,0:17:21.54:0,22,383	0/0:12,0:12:14:0,14,155	0/0:14,0:14:30.10:0,30,744	0/0:18,0:18:30.09:0,30,694	0/0:14,0:14:21.06:0,21,472	1/1:17,8:28:18.06:731,18,0	0/0:18,0:18:11.96:0,12,222	1/1:26,1:27:24.01:553,24,0	0/0:13,0:12:3:0,3,28	0/0:28,0:27:45.14:0,45,1043	0/0:20,0:20:24.06:0,24,488	0/0:16,0:16:30.10:0,30,744	0/0:15,0:15:27.08:0,27,577	0/0:12,0:12:24.08:0,24,569	0/0:27,0:27:33.10:0,33,754	0/0:17,0:17:24.47:0,24,271	0/0:14,0:14:24.08:0,24,595	0/0:20,0:20:30.10:0,30,744	0/0:22,0:23:30.10:0,30,726
chr10	90391604	.	AAAAT	A	4643.29	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.579;DP=615;FS=0.000;HRun=0;HaplotypeScore=99.1027;InbreedingCoeff=0.9682;MQ=66.06;MQ0=0;MQRankSum=-0.056;QD=38.06;ReadPosRankSum=1.540;VQSLOD=5.0685;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,3219	0/0:9,0:9:27.05:0,27,567	0/0:16,0:14:6.63:0,7,362	0/0:10,0:6:11.95:0,12,151	0/0:30,0:30:81.28:0,81,2055	0/0:23,0:23:66.23:0,66,1653	0/0:24,0:24:66.23:0,66,1623	0/0:41,0:41:99:0,111,2620	0/0:16,0:16:42.13:0,42,968	1/1:2,24:26:72.19:1131,72,0	1/1:1,18:19:48.08:780,48,0	0/0:21,0:21:54.17:0,54,1276	0/0:17,0:17:48.15:0,48,1146	0/0:12,0:12:27.09:0,27,635	0/0:27,0:27:75.26:0,75,1890	1/1:2,36:38:84.22:1418,84,0	0/0:24,0:24:63.19:0,63,1534	1/1:2,15:17:33.11:580,33,0	0/0:28,0:28:72.20:0,72,1523	0/0:29,0:29:84.29:0,84,2073	0/0:11,0:11:33.10:0,33,705	0/0:13,0:13:34:0,34,831	0/0:21,0:21:54.19:0,54,1342	0/0:15,0:15:42.10:0,42,985	1/1:1,21:22:50.96:735,51,0	0/0:23,1:24:16.32:0,16,1444	0/0:17,0:17:48.15:0,48,1172	0/0:19,0:19:57.16:0,57,1188
chr10	90392879	.	GC	G	2729.50	PASS	AB=0.833;AC=11;AF=0.196;AN=56;BaseQRankSum=6.736;DP=516;FS=1.478;HRun=2;HaplotypeScore=53.3195;InbreedingCoeff=0.8840;MQ=55.33;MQ0=1;MQRankSum=-0.913;QD=29.99;ReadPosRankSum=1.988;VQSLOD=3.3242;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:83.98:0,84,1199	0/1:4,1:5:23.85:24,0,165	0/0:14,0:12:33.58:0,34,495	0/0:22,0:20:23.89:0,24,593	0/0:15,0:14:42.14:0,42,628	0/0:21,0:21:60.19:0,60,879	0/0:20,0:20:60.19:0,60,878	0/0:28,0:28:84.28:0,84,1256	0/0:13,0:13:39.09:0,39,557	1/1:0,13:13:39.11:490,39,0	1/1:2,13:15:30.10:389,30,0	0/0:18,0:18:54.18:0,54,809	0/0:24,0:24:69.23:0,69,1019	0/0:16,0:16:48.15:0,48,697	0/0:25,1:26:36.29:0,36,1039	1/1:0,24:24:69.22:895,69,0	0/0:29,0:29:84.24:0,84,1232	1/1:1,19:20:54.18:701,54,0	0/0:24,0:23:66.22:0,66,989	0/0:20,0:17:51.17:0,51,764	0/0:32,0:32:93.32:0,93,1394	0/0:7,0:7:21.03:0,21,290	0/0:11,0:11:30.10:0,30,449	0/0:12,0:12:36.12:0,36,540	1/1:0,14:14:33.06:409,33,0	0/0:20,0:20:57.18:0,57,836	0/0:14,0:14:42.14:0,42,629	0/0:6,0:6:18.04:0,18,249
chr10	90393587	.	A	AG	4187.02	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-11.436;DP=648;FS=5.004;HRun=2;HaplotypeScore=69.3266;InbreedingCoeff=0.9974;MQ=73.92;MQ0=0;MQRankSum=-0.684;QD=38.41;ReadPosRankSum=0.034;VQSLOD=4.1082;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:54:99:0,153,1880	0/0:6,0:6:18.04:0,18,210	0/0:18,0:18:48.15:0,48,593	0/0:20,0:20:51.15:0,51,608	0/0:21,0:21:54.17:0,54,669	0/0:12,0:12:36.04:0,36,412	0/0:15,0:12:33.10:0,33,409	0/0:35,0:35:81.22:0,81,984	0/0:28,0:28:78.21:0,78,930	1/1:2,24:26:72.21:995,72,0	1/1:0,10:10:30.10:431,30,0	0/0:22,0:22:66.17:0,66,801	0/0:22,0:22:60.15:0,60,725	0/0:25,0:25:72.20:0,72,858	0/0:31,0:31:93.29:0,93,1151	1/1:2,25:27:69.23:993,69,0	0/0:45,0:45:99:0,120,1485	1/1:0,24:24:69.23:991,69,0	0/0:12,0:12:36.11:0,36,443	0/0:17,0:17:45.13:0,45,547	0/0:35,0:35:99:0,102,1231	0/0:20,0:20:57.16:0,57,692	0/0:13,0:13:36.10:0,36,433	0/0:27,0:27:75.16:0,75,885	1/1:0,22:22:54.18:778,54,0	0/0:27,0:27:78.20:0,78,949	0/0:25,0:25:75.20:0,75,892	0/0:8,0:8:24.03:0,24,259
chr10	90394103	.	TTAATA	T	8788.69	PASS	AB=0.522;AC=15;AF=0.268;AN=56;BaseQRankSum=15.301;DP=685;FS=13.643;HRun=0;HaplotypeScore=129.1482;InbreedingCoeff=0.9032;MQ=81.84;MQ0=1;MQRankSum=-9.035;QD=47.25;ReadPosRankSum=4.101;VQSLOD=4.6142;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.27:0,78,2298	1/1:1,6:7:12.04:260,12,0	0/0:30,0:30:46.10:0,46,2320	0/0:18,0:18:54.18:0,54,1448	0/0:25,0:25:66.23:0,66,1921	0/0:24,0:23:66.20:0,66,1955	0/0:21,0:21:60.21:0,60,1834	0/0:40,0:40:99:0,117,3626	0/0:27,0:27:78.25:0,78,2318	1/1:1,18:18:47.91:1041,48,0	1/1:1,22:23:51.13:1007,51,0	0/0:27,0:27:78.27:0,78,2436	0/0:25,0:24:66.23:0,66,2046	0/0:23,0:23:66.23:0,66,2040	1/1:3,39:42:99:2164,103,0	0/1:3,32:35:99:1669,0,103	1/1:2,27:29:60.21:1295,60,0	1/1:1,14:15:29.79:651,30,0	0/0:22,0:22:63.22:0,63,1877	0/0:25,0:25:69.24:0,69,2041	0/0:22,0:22:66.21:0,66,2021	0/0:20,0:20:57.20:0,57,1735	0/0:25,0:24:69.24:0,69,2101	0/0:21,0:21:63.22:0,63,1834	1/1:1,15:16:33.11:702,33,0	0/0:45,0:45:67.33:0,67,3889	0/0:18,0:18:54.17:0,54,1631	0/0:14,0:14:36.12:0,36,1115
chr10	90394342	.	CT	C	652.52	PASS	AB=0.898;AC=13;AF=0.232;AN=56;BaseQRankSum=10.658;DP=652;FS=2.579;HRun=11;HaplotypeScore=82.9263;InbreedingCoeff=0.6012;MQ=80.93;MQ0=6;MQRankSum=-2.439;QD=3.63;ReadPosRankSum=1.729;VQSLOD=0.6273;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:29:53.50:0,53,755	0/0:6,0:6:18.02:0,18,181	0/0:51,0:26:36.55:0,37,316	0/0:45,1:29:12.76:0,13,294	0/0:19,0:19:40.62:0,41,404	0/0:13,0:14:35.95:0,36,359	0/0:21,2:23:32.44:0,32,541	0/1:38,6:45:20.88:21,0,842	0/1:19,1:21:22.89:23,0,370	1/1:17,0:17:2.13:82,2,0	1/1:19,0:19:36.31:185,36,0	0/0:16,0:18:17.51:0,18,373	0/0:18,0:17:20.52:0,21,416	0/0:15,0:15:45.09:0,45,465	0/0:20,1:21:20.41:0,20,396	1/1:22,0:22:42.25:215,42,0	0/0:31,1:32:59.14:0,59,804	1/1:15,0:15:1.66:105,2,0	0/0:19,1:20:32.33:0,32,528	0/0:22,0:22:46.81:0,47,544	0/0:24,0:24:62.96:0,63,618	0/0:22,0:24:47.98:0,48,488	0/1:15,2:18:6.50:6,0,334	0/0:18,2:20:8.94:0,9,416	1/1:23,0:23:37.76:182,38,0	0/0:28,1:29:22.63:0,23,610	0/0:22,0:22:25.65:0,26,436	0/0:16,0:17:32.95:0,33,333
chr10	90394353	.	TC	T	2216.65	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.050;DP=644;FS=1.991;HRun=2;HaplotypeScore=76.8592;InbreedingCoeff=0.9878;MQ=75.13;MQ0=6;MQRankSum=-1.196;QD=23.83;ReadPosRankSum=1.303;VQSLOD=3.6202;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:83.30:0,83,1023	0/0:9,0:9:23.90:0,24,255	0/0:45,1:24:43.88:0,44,361	0/0:33,0:20:10.04:0,10,143	0/0:22,0:22:41:0,41,604	0/0:14,0:14:39.08:0,39,474	0/0:23,0:23:59.59:0,60,714	0/0:41,0:41:99:0,104,1148	0/0:24,0:24:59.75:0,60,628	1/1:4,11:14:33:347,33,0	1/1:1,17:18:50.96:560,51,0	0/0:20,0:20:50.44:0,50,625	0/0:19,0:18:48.08:0,48,557	0/0:16,0:16:41.87:0,42,530	0/0:17,0:17:39.95:0,40,448	1/1:0,21:21:45.14:576,45,0	0/0:33,0:33:74.84:0,75,1010	1/1:2,14:16:28.16:391,28,0	0/0:23,0:22:61.31:0,61,675	0/0:22,0:22:38.58:0,39,662	0/0:22,0:22:60.18:0,60,769	0/0:28,0:28:71.95:0,72,766	0/0:18,0:18:24.14:0,24,501	0/0:21,0:21:42.57:0,43,584	1/1:1,22:23:42.05:518,42,0	0/0:28,1:28:52.41:0,52,873	0/0:20,0:19:57.51:0,58,672	0/0:18,0:18:54:0,54,535
chr10	90394720	.	TTC	T	1019.46	PASS	AB=0.996;AC=24;AF=0.571;AN=42;BaseQRankSum=-4.223;DP=571;FS=28.635;HRun=0;HaplotypeScore=120.4923;InbreedingCoeff=0.0001;MQ=46.30;MQ0=22;MQRankSum=1.573;QD=2.87;ReadPosRankSum=3.000;VQSLOD=0.9531;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:22:5.99:0,6,48	./.	./.	./.	1/1:18,0:17:0.22:1,0,0	1/1:22,0:21:4.59:28,5,0	1/1:29,0:29:14.34:92,14,0	1/1:31,0:25:2.96:19,3,0	0/1:29,1:29:49.24:111,0,49	0/0:32,0:31:32.17:0,32,183	./.	0/1:24,0:22:39.78:41,0,40	0/1:21,0:21:8.83:82,0,9	1/1:15,1:16:11.47:83,11,0	./.	0/0:26,0:26:2.80:0,3,13	./.	0/0:11,0:10:2.97:0,3,20	1/1:21,0:18:17.85:129,18,0	1/1:20,0:20:14.11:94,14,0	0/1:24,0:21:12.66:35,0,13	1/1:22,0:20:4.43:40,4,0	0/0:10,5:13:0.47:0,0,1	0/1:25,0:25:10.66:55,0,11	./.	0/1:31,0:29:15.32:249,0,15	0/1:13,0:13:29.34:43,0,29	0/1:7,0:6:17.04:53,0,17
chr10	90394722	.	C	CTCTGTT	1779.50	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-0.886;DP=576;FS=4.526;HRun=0;HaplotypeScore=159.8134;InbreedingCoeff=0.5352;MQ=45.88;MQ0=22;MQRankSum=0.014;QD=11.94;ReadPosRankSum=-1.282;VQSLOD=2.5884;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:22:13.70:0,14,181	0/0:4,0:3:6.02:0,6,76	0/0:19,0:4:5.97:0,6,74	0/1:16,0:7:13.76:14,0,58	0/0:19,0:18:11.18:0,11,160	0/0:21,0:20:13.32:0,13,230	0/0:31,0:30:42.92:0,43,667	0/0:30,0:24:56.22:0,56,915	0/0:31,0:30:21.92:0,22,676	0/1:31,0:30:8.47:1089,0,8	1/1:19,0:19:2.37:50,2,0	0/0:24,0:22:22.88:0,23,595	0/0:21,0:21:32.69:0,33,614	0/0:16,0:16:14.25:0,14,197	0/0:25,0:25:17.70:0,18,296	1/1:7,17:26:0.99:92,1,0	0/0:8,0:7:9.03:0,9,128	1/1:10,0:9:26.76:423,27,0	0/0:23,0:20:48.93:0,49,828	0/0:21,0:21:51.08:0,51,817	0/0:23,0:20:35.53:0,36,704	0/0:24,0:22:24.72:0,25,418	0/0:16,0:14:17.64:0,18,294	0/0:26,0:26:39.24:0,39,596	1/1:16,0:14:23.70:258,24,0	0/1:31,0:29:0.52:1,0,1212	0/0:13,0:13:13.12:0,13,194	0/0:7,0:6:18.04:0,18,319
chr10	90394724	.	C	CTGTT	1677.26	PASS	AB=0.864;AC=9;AF=0.161;AN=56;BaseQRankSum=-0.916;DP=561;FS=1.979;HRun=0;HaplotypeScore=149.8756;InbreedingCoeff=0.5013;MQ=45.43;MQ0=23;MQRankSum=0.722;QD=14.98;ReadPosRankSum=-0.766;VQSLOD=3.4263;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:21:14.02:0,14,195	0/0:4,0:3:6.02:0,6,76	0/0:19,0:4:5.97:0,6,74	0/1:16,0:7:40.17:40,0,57	0/0:21,0:19:15.50:0,15,166	0/0:18,0:17:13.75:0,14,219	0/0:31,0:30:38.91:0,39,599	0/0:29,0:23:63.11:0,63,951	0/0:30,0:29:35.25:0,35,622	0/1:10,19:31:72.37:1004,0,72	1/1:7,9:18:0.54:47,1,0	0/0:24,0:22:32.48:0,32,539	0/0:21,0:21:32.69:0,33,539	0/0:16,0:16:14.56:0,15,172	0/0:25,0:25:17.96:0,18,296	0/1:21,0:21:0.20:50,0,0	0/0:8,0:7:9.03:0,9,128	1/1:10,0:9:26.76:423,27,0	0/0:22,0:19:53.27:0,53,798	0/0:23,0:23:40.88:0,41,737	0/0:22,0:19:35.69:0,36,626	0/0:22,0:20:30.65:0,31,430	0/0:16,0:14:17.82:0,18,283	0/0:26,0:26:38.93:0,39,580	1/1:15,0:13:23.70:258,24,0	0/0:29,0:27:2.29:0,2,1070	0/0:12,0:12:9.93:0,10,193	0/0:7,0:6:18.04:0,18,274
chr10	90394945	.	C	CCCT	3986.79	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-7.920;DP=586;FS=26.482;HRun=0;HaplotypeScore=86.6759;InbreedingCoeff=0.9900;MQ=86.85;MQ0=0;MQRankSum=-0.893;QD=49.83;ReadPosRankSum=2.550;VQSLOD=2.9333;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.05:0,69,986	0/0:10,0:10:30.07:0,30,462	0/0:19,0:19:50.79:0,51,814	0/0:26,0:26:72.18:0,72,1096	0/0:12,0:12:30.07:0,30,458	0/0:13,0:13:36.11:0,36,564	0/0:30,0:30:75.21:0,75,1196	0/0:26,0:26:66.20:0,66,1030	0/0:22,0:22:63.18:0,63,1001	1/1:3,14:17:45.15:1004,45,0	1/1:1,5:6:12.04:268,12,0	0/0:24,0:24:66.18:0,66,1023	0/0:19,0:19:51.09:0,51,752	0/0:19,0:19:57.12:0,57,874	0/0:27,0:27:75.26:0,75,1211	1/1:0,12:13:33.11:736,33,0	0/0:25,0:25:72.18:0,72,1113	1/1:5,16:21:36.12:773,36,0	0/0:23,0:23:69.20:0,69,1072	0/0:15,0:15:36.10:0,36,561	0/0:49,0:49:99:0,135,2137	0/0:17,0:17:48.01:0,48,651	0/0:15,0:15:45.11:0,45,682	0/0:32,0:31:78.22:0,78,1224	1/1:2,20:23:54.19:1206,54,0	0/0:27,1:28:17.23:0,17,1209	0/0:19,0:19:54.11:0,54,816	0/0:10,0:10:30.10:0,30,490
chr10	90394996	.	G	GGT	1216.13	PASS	AB=0.870;AC=22;AF=0.440;AN=50;BaseQRankSum=-4.133;DP=597;FS=0.824;HRun=0;HaplotypeScore=110.2524;InbreedingCoeff=-0.1058;MQ=68.18;MQ0=6;MQRankSum=1.206;QD=3.31;ReadPosRankSum=-2.314;VQSLOD=2.1326;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:8.54:0,9,96	1/1:7,0:7:3.45:22,3,0	./.	./.	1/1:5,3:9:3:26,3,0	0/1:12,3:16:26.23:38,0,26	0/1:24,4:29:23.63:79,0,24	1/1:31,0:31:4.75:24,5,0	0/0:11,0:15:11.83:0,12,56	0/0:16,0:18:5.68:0,6,28	./.	0/1:25,2:28:28.21:118,0,28	0/1:11,0:11:22.61:73,0,23	0/1:16,4:24:26.16:38,0,26	0/1:22,2:23:49.35:114,0,49	0/0:10,0:18:19.01:0,19,96	0/0:16,0:25:16.61:0,17,83	0/0:11,0:18:19.67:0,20,97	1/1:14,0:14:3.01:42,3,0	0/1:10,6:16:44.32:76,0,44	0/1:51,0:50:42.07:97,0,42	0/0:15,0:15:8.79:0,9,69	1/1:17,0:16:3.01:43,3,0	0/1:16,9:29:2.23:244,0,2	0/0:13,0:13:2.84:0,3,14	0/1:26,7:34:2.08:250,0,2	0/1:16,1:16:35.15:35,0,55	0/1:9,0:9:14.75:45,0,15
chr10	90398349	.	CT	C	1144.43	PASS	AB=0.898;AC=14;AF=0.250;AN=56;BaseQRankSum=8.508;DP=335;FS=1.194;HRun=11;HaplotypeScore=40.2575;InbreedingCoeff=0.5458;MQ=55.49;MQ0=13;MQRankSum=0.443;QD=10.40;ReadPosRankSum=1.860;VQSLOD=2.1264;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:59.96:0,60,596	0/0:3,0:3:9.02:0,9,96	0/1:11,0:6:0.74:1,0,48	0/0:17,0:9:3.27:0,3,72	0/0:11,0:10:14.97:0,15,146	0/0:14,0:13:30.08:0,30,319	0/0:9,0:9:12.03:0,12,128	0/0:31,0:28:57.07:0,57,571	0/0:11,0:10:21.04:0,21,216	1/1:3,11:12:32.95:268,33,0	1/1:3,4:5:11.99:98,12,0	0/0:7,0:7:14.99:0,15,146	0/0:2,0:2:3.01:0,3,32	0/0:10,0:10:23.88:0,24,209	0/0:4,0:4:5.96:0,6,51	1/1:3,7:10:17.98:148,18,0	0/0:25,0:24:51.12:0,51,537	1/1:1,22:23:59.93:492,60,0	0/0:14,0:13:24.06:0,24,256	0/1:8,1:7:6.63:7,0,129	0/0:7,0:8:11.85:0,12,103	0/0:1,0:1:3.01:0,3,32	0/1:4,1:5:12.77:13,0,66	0/0:7,0:6:15.04:0,15,160	1/1:4,11:14:32.96:271,33,0	0/1:12,3:13:22.17:22,0,197	0/0:18,0:18:45.09:0,45,469	0/0:7,0:7:15.04:0,15,160
chr10	90399380	.	AT	A	3962.48	PASS	AB=0.965;AC=51;AF=0.911;AN=56;BaseQRankSum=1.859;DP=633;FS=0.000;HRun=3;HaplotypeScore=145.4409;InbreedingCoeff=0.4452;MQ=57.36;MQ0=2;MQRankSum=10.530;QD=6.45;ReadPosRankSum=5.450;VQSLOD=0.3549;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:41.79:155,42,0	0/1:11,0:11:0.14:42,0,0	0/1:15,2:7:52.38:52,0,98	0/0:19,0:7:20.96:0,21,183	1/1:31,0:31:27.30:111,27,0	1/1:18,0:18:31.24:93,31,0	1/1:17,0:17:38.06:153,38,0	1/1:24,0:23:29.83:127,30,0	1/1:28,0:28:64.66:285,65,0	1/1:22,0:22:33.31:185,33,0	1/1:15,0:15:15.35:63,15,0	1/1:23,0:23:30.80:112,31,0	1/1:13,0:13:28.49:106,28,0	1/1:23,0:23:48.71:218,49,0	1/1:27,0:27:61.24:259,61,0	1/1:24,0:24:56.61:222,57,0	1/1:39,0:39:74.56:269,75,0	1/1:31,0:31:41.26:160,41,0	1/1:13,0:12:19.25:100,19,0	1/1:19,0:19:30.76:116,31,0	1/1:31,1:32:22.16:152,22,0	1/1:21,1:22:31.82:151,32,0	1/1:22,0:22:38.27:130,38,0	1/1:26,0:26:52.88:167,53,0	1/1:17,0:17:14.87:90,15,0	1/1:38,0:38:62.07:302,62,0	1/1:21,0:21:38.60:122,39,0	0/1:9,0:9:0.29:18,0,0
chr10	90399691	.	G	GA	1916.47	PASS	AB=0.909;AC=11;AF=0.196;AN=56;BaseQRankSum=-6.848;DP=602;FS=3.627;HRun=10;HaplotypeScore=63.5724;InbreedingCoeff=0.8743;MQ=79.95;MQ0=0;MQRankSum=0.512;QD=18.79;ReadPosRankSum=-0.436;VQSLOD=4.2764;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:95.88:0,96,788	0/1:9,1:10:8.06:8,0,148	0/0:13,0:14:19.18:0,19,135	0/0:16,0:16:5.86:0,6,133	0/0:22,0:24:43.97:0,44,351	0/0:12,0:12:29.96:0,30,246	0/0:25,0:26:46.94:0,47,375	0/0:44,0:46:88.82:0,89,713	0/0:19,0:19:50.92:0,51,416	1/1:3,22:26:35.30:550,35,0	1/1:3,8:11:23.06:242,23,0	0/0:19,0:18:22.86:0,23,344	0/0:19,0:19:40.95:0,41,323	0/0:19,0:19:32.94:0,33,271	0/0:31,0:31:80.90:0,81,665	1/1:8,16:24:48.11:506,48,0	0/0:26,0:26:71.88:0,72,586	1/1:3,14:17:36.09:384,36,0	0/0:31,1:32:48.87:0,49,603	0/0:25,0:26:52.95:0,53,425	0/0:25,0:25:58.98:0,59,488	0/0:20,0:20:47.93:0,48,394	0/0:10,0:10:23.97:0,24,197	0/0:24,0:25:55.96:0,56,449	1/1:0,14:14:39.06:404,39,0	0/0:27,0:27:65.90:0,66,542	0/0:19,0:19:53.92:0,54,443	0/0:7,0:8:16.97:0,17,126
chr10	90400227	.	AAC	A	377.39	PASS	AB=0.867;AC=16;AF=0.320;AN=50;BaseQRankSum=2.181;DP=627;FS=10.619;HRun=0;HaplotypeScore=111.0884;InbreedingCoeff=0.5600;MQ=54.28;MQ0=27;MQRankSum=-0.947;QD=2.27;ReadPosRankSum=0.508;VQSLOD=1.6278;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:24.57:0,25,500	1/1:11,0:11:11.23:85,11,0	./.	./.	0/1:8,0:11:6.73:7,0,24	0/0:9,0:20:11.69:0,12,107	0/0:17,0:21:0:0,0,0	0/0:23,0:22:9.60:0,10,66	0/0:17,0:32:17.83:0,18,144	1/1:13,0:16:14.07:63,14,0	0/1:10,0:13:0.15:0,0,0	0/0:12,0:26:12:0,12,104	0/1:9,0:10:0.36:0,0,6	0/0:14,0:19:17.98:0,18,175	1/1:17,19:36:20.89:213,21,0	1/1:14,0:21:5.14:28,5,0	0/1:11,8:18:47.29:95,0,47	1/1:14,0:15:2.84:14,3,0	0/0:22,0:22:18.31:0,18,146	0/0:13,0:13:13.83:0,14,129	0/0:43,0:43:15.73:0,16,155	0/0:8,0:14:4.74:0,5,32	./.	0/0:33,0:34:15.28:0,15,138	1/1:5,0:6:3:26,3,0	0/0:20,0:27:24.85:0,25,192	0/0:14,0:14:5.98:0,6,48	0/0:13,0:18:14.97:0,15,124
chr10	90400288	.	TCTCTCACACA	T	984.08	PASS	AB=0.954;AC=12;AF=0.214;AN=56;BaseQRankSum=3.704;DP=485;FS=7.498;HRun=0;HaplotypeScore=129.4753;InbreedingCoeff=0.3403;MQ=45.07;MQ0=44;MQRankSum=-3.928;QD=7.08;ReadPosRankSum=-0.594;VQSLOD=1.7015;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:6.17:0,6,1143	0/0:7,0:7:15.29:0,15,161	0/0:39,0:4:6.33:0,6,38	0/0:36,0:5:12.01:0,12,145	0/0:14,0:13:20.99:0,21,595	0/0:15,0:13:26.73:0,27,445	0/1:20,0:17:47.43:47,0,136	0/0:20,0:17:33.58:0,34,601	0/0:16,0:16:11.57:0,12,211	0/1:16,0:15:10.01:416,0,10	0/1:8,5:12:0:0,0,0	0/0:15,0:14:14.81:0,15,343	0/0:5,0:5:6.96:0,7,140	0/0:13,0:13:10.43:0,10,483	0/1:21,0:21:2.32:2,0,148	1/1:13,0:13:11.82:210,12,0	0/1:16,0:13:48.62:49,0,404	1/1:9,4:12:14.03:319,14,0	0/0:10,0:10:21.49:0,21,520	0/0:8,0:8:18.40:0,18,314	0/0:33,0:28:44.77:0,45,873	0/0:12,0:12:17.60:0,18,322	0/0:7,0:7:6.02:0,6,218	0/0:35,0:28:32.60:0,33,744	1/1:3,9:12:3.01:73,3,0	0/0:15,0:15:39.74:0,40,599	0/0:16,0:16:39.60:0,40,1123	0/1:14,0:10:14.51:15,0,232
chr10	90400290	.	TCTCA	T	1278.76	PASS	AB=0.982;AC=30;AF=0.536;AN=56;BaseQRankSum=2.432;DP=487;FS=41.791;HRun=0;HaplotypeScore=100.5139;InbreedingCoeff=-0.3175;MQ=45.12;MQ0=43;MQRankSum=-2.158;QD=3.28;ReadPosRankSum=-2.728;VQSLOD=-0.4764;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:30:93.06:93,0,322	0/1:7,0:7:14.45:24,0,14	0/0:36,0:4:0.47:0,0,1	0/0:32,0:5:11.79:0,12,75	0/1:14,0:13:50.33:50,0,118	0/1:15,0:13:45.54:46,0,115	1/1:21,0:18:25.13:186,25,0	0/0:21,0:18:10.54:0,11,272	1/1:16,0:16:10.51:60,11,0	1/1:18,0:17:17.61:191,18,0	0/1:11,0:12:0:0,0,0	0/1:15,0:14:7.08:7,0,51	0/1:5,0:5:14.97:15,0,24	0/1:15,0:15:36.50:37,0,49	0/1:20,0:20:26.99:57,0,27	1/1:12,0:12:11.60:83,12,0	0/1:17,0:14:74.06:83,0,74	1/1:15,0:13:14.47:113,14,0	0/1:10,0:10:28.42:28,0,122	0/1:7,0:7:71.77:72,0,72	0/1:33,0:28:58.88:59,0,182	0/1:12,0:12:21.98:84,0,22	0/0:8,0:8:5.99:0,6,50	0/1:25,12:30:26.89:27,0,156	1/1:13,0:12:2.92:18,3,0	0/1:14,0:14:25.27:25,0,156	0/1:17,0:17:21.58:22,0,322	0/1:14,0:10:53.96:62,0,54
chr10	90400292	.	TCA	T	1103.07	PASS	AB=0.972;AC=40;AF=0.800;AN=50;BaseQRankSum=-0.573;DP=492;FS=1.456;HRun=0;HaplotypeScore=97.0455;InbreedingCoeff=0.4198;MQ=44.91;MQ0=43;MQRankSum=0.614;QD=3.13;ReadPosRankSum=0.035;VQSLOD=1.8796;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:14.93:0,15,113	1/1:3,0:7:5.68:28,6,0	./.	0/0:27,0:5:0:0,0,0	0/0:14,0:13:6.86:0,7,72	1/1:15,0:13:8.97:72,9,0	1/1:22,0:19:11.63:83,12,0	./.	1/1:17,1:18:8.77:75,9,0	1/1:14,0:16:11.54:64,12,0	0/1:12,0:12:0.01:0,0,0	1/1:14,1:14:9:86,9,0	0/0:7,0:7:3:0,3,25	1/1:15,1:16:7.36:101,7,0	1/1:19,0:21:9.99:62,10,0	1/1:11,0:12:5.63:31,6,0	1/1:18,0:14:11.63:77,12,0	1/1:15,0:13:5.27:27,5,0	1/1:9,0:9:1.18:23,1,0	1/1:7,1:8:5.76:47,6,0	1/1:34,1:30:8.58:73,9,0	1/1:13,0:12:11.78:99,12,0	./.	1/1:37,2:32:8.53:88,9,0	1/1:13,0:12:2.76:17,3,0	1/1:14,0:14:8.95:68,9,0	0/1:16,1:17:40.77:41,0,64	1/1:13,0:11:11.65:71,12,0
chr10	90401178	.	G	GAC	3625.17	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.180;DP=714;FS=5.118;HRun=0;HaplotypeScore=118.2859;InbreedingCoeff=0.9951;MQ=63.80;MQ0=10;MQRankSum=0.099;QD=33.26;ReadPosRankSum=0.537;VQSLOD=5.4765;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,1356	0/0:14,0:14:25.02:0,25,319	0/0:29,0:13:20.56:0,21,258	0/0:29,0:13:22.30:0,22,220	0/0:15,0:15:39.11:0,39,504	0/0:20,0:20:51.13:0,51,635	0/0:40,0:40:93.29:0,93,1220	0/0:31,0:31:87.05:0,87,1139	0/0:23,0:23:66.22:0,66,877	1/1:10,25:36:96.26:1528,96,0	1/1:2,11:13:18.06:311,18,0	0/0:34,0:34:90.27:0,90,1166	0/0:22,0:22:54.14:0,54,686	0/0:17,0:16:42.12:0,42,543	0/0:29,0:27:35.92:0,36,535	1/1:2,14:16:29.77:479,30,0	0/0:26,0:26:46.61:0,47,582	1/1:1,25:26:51.17:840,51,0	0/0:20,0:20:43.69:0,44,551	0/0:18,0:18:48.16:0,48,638	0/0:69,0:68:99:0,175,2310	0/0:29,0:29:84.19:0,84,1051	0/0:14,0:14:27.09:0,27,359	0/0:34,0:34:90.25:0,90,1171	1/1:1,17:18:27:467,27,0	0/0:22,0:22:60.17:0,60,758	0/0:24,0:24:60.16:0,60,765	0/0:9,0:9:27.07:0,27,342
chr10	90401206	.	CACAG	C	1070.12	PASS	AB=0.910;AC=9;AF=0.161;AN=56;BaseQRankSum=7.576;DP=736;FS=2.031;HRun=0;HaplotypeScore=152.1852;InbreedingCoeff=-0.1940;MQ=54.15;MQ0=10;MQRankSum=1.787;QD=4.84;ReadPosRankSum=-6.145;VQSLOD=0.1710;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,109,2558	0/1:12,2:14:99:166,0,142	0/0:12,0:4:9.45:0,9,58	0/1:27,0:5:11.05:11,0,70	0/0:21,0:21:35.36:0,35,995	0/0:14,0:14:26.57:0,27,596	0/0:37,0:37:65.58:0,66,1259	0/0:33,0:31:62.87:0,63,894	0/0:28,0:28:74.80:0,75,1144	0/1:34,3:37:99:381,0,132	0/1:14,0:14:46.28:46,0,111	0/0:31,0:31:75.27:0,75,1384	0/0:18,0:18:12.45:0,12,645	0/0:15,0:14:35.96:0,36,518	0/1:26,8:31:99:130,0,261	0/1:18,0:18:87.76:164,0,88	0/1:15,13:28:52.68:53,0,209	0/1:24,3:24:99:200,0,168	0/0:15,0:15:41.38:0,41,423	0/0:20,0:20:23.71:0,24,368	0/0:80,0:79:99:0,160,2888	0/0:30,0:30:65.02:0,65,1067	0/0:11,0:11:21.03:0,21,373	0/0:39,0:39:96.13:0,96,1930	0/1:21,0:20:59.15:59,0,116	0/0:27,0:27:49.51:0,50,1199	0/0:21,0:21:42.67:0,43,744	0/0:12,0:12:32.76:0,33,508
chr10	90401208	.	CAG	C	1232.89	PASS	AB=0.975;AC=10;AF=0.179;AN=56;BaseQRankSum=9.238;DP=736;FS=6.192;HRun=0;HaplotypeScore=125.3420;InbreedingCoeff=0.2029;MQ=53.94;MQ0=11;MQRankSum=0.110;QD=6.39;ReadPosRankSum=-3.738;VQSLOD=1.9810;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,136,1986	0/1:14,0:14:69.04:105,0,69	0/0:11,0:4:8.91:0,9,56	0/1:28,0:5:11.64:12,0,27	0/0:21,0:21:16.62:0,17,715	0/0:14,0:14:26.57:0,27,457	0/0:36,0:36:64.14:0,64,956	0/0:32,0:30:57.75:0,58,756	0/0:28,0:28:47.58:0,48,846	1/1:39,0:39:35.96:537,36,0	0/1:12,0:12:37.79:71,0,38	0/0:31,0:31:61.76:0,62,1076	0/0:18,0:18:33.15:0,33,481	0/0:16,0:15:28.87:0,29,395	0/1:33,1:31:69.90:70,0,236	1/1:17,0:17:6.48:246,6,0	0/0:28,0:28:0.34:0,0,168	0/1:27,0:24:23.65:234,0,24	0/0:16,0:16:21.62:0,22,339	0/0:20,0:20:24.30:0,24,312	0/0:81,0:80:66.93:0,67,2016	0/0:29,0:29:65.02:0,65,861	0/0:11,0:11:21.02:0,21,272	0/0:39,0:39:86.29:0,86,1423	0/1:19,3:21:22.65:108,0,23	0/0:26,0:26:69.85:0,70,943	0/0:21,0:21:20.21:0,20,530	0/0:12,0:12:32.56:0,33,329
chr10	90401210	.	GAC	G	194.13	PASS	AB=0.955;AC=11;AF=0.204;AN=54;BaseQRankSum=4.468;DP=730;FS=3.016;HRun=0;HaplotypeScore=128.2546;InbreedingCoeff=-0.1267;MQ=55.51;MQ0=11;MQRankSum=0.231;QD=0.71;ReadPosRankSum=-0.407;VQSLOD=2.3586;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:53:91.18:0,91,1507	0/1:13,0:13:16.08:16,0,18	./.	0/0:29,0:7:13.64:0,14,120	0/0:20,0:20:16.69:0,17,636	0/0:13,0:14:18.05:0,18,258	0/0:34,0:34:47.77:0,48,621	0/1:31,0:29:18.87:19,0,524	0/0:27,1:28:10.55:0,11,549	0/0:39,0:39:20.93:0,21,321	0/0:12,0:12:14.55:0,15,175	0/0:32,1:33:19.85:0,20,727	0/0:17,0:18:8.37:0,8,221	0/1:14,2:15:4.22:4,0,364	0/1:32,0:29:23.01:36,0,23	0/1:18,0:18:18.92:19,0,132	1/1:29,0:29:2.89:12,3,0	0/0:28,0:25:27.39:0,27,298	0/1:16,0:16:20.39:20,0,95	0/1:16,1:18:27.70:28,0,158	0/1:74,6:79:99:140,0,1490	0/0:28,0:28:1.86:0,2,472	0/0:11,0:11:9.03:0,9,133	0/0:33,3:36:37.93:0,38,1027	0/0:22,0:21:16.58:0,17,200	0/0:25,0:26:2.66:0,3,603	0/1:18,3:21:38.58:39,0,326	0/0:11,0:11:18.06:0,18,266
chr10	90401663	.	A	AC	1924.13	PASS	AB=0.929;AC=54;AF=0.964;AN=56;BaseQRankSum=-2.147;DP=309;FS=12.555;HRun=2;HaplotypeScore=105.5127;InbreedingCoeff=-0.0095;MQ=45.54;MQ0=1;MQRankSum=-0.241;QD=6.23;ReadPosRankSum=1.518;VQSLOD=-0.4041;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,1:17:28.76:220,29,0	1/1:7,0:7:6.71:15,7,0	1/1:7,2:7:4.07:36,4,0	0/1:10,2:11:24.98:80,0,25	1/1:11,1:12:14.14:76,14,0	1/1:16,0:16:19.20:86,19,0	1/1:17,0:17:24.65:116,25,0	1/1:16,0:16:8.36:79,8,0	1/1:10,0:10:12.37:51,12,0	1/1:10,0:10:20.99:99,21,0	1/1:4,0:4:5.07:22,5,0	1/1:15,0:15:4.55:15,5,0	1/1:4,0:4:9.67:53,10,0	1/1:9,1:10:14.48:104,14,0	1/1:14,0:14:28.31:179,28,0	1/1:16,0:16:21.19:83,21,0	1/1:9,0:9:19.77:81,20,0	1/1:10,0:10:14.99:69,15,0	1/1:4,0:4:7.61:23,8,0	1/1:15,1:16:18.44:78,18,0	1/1:20,0:20:25.20:163,25,0	1/1:10,0:10:10.57:47,11,0	1/1:7,0:7:7.66:28,8,0	0/1:5,0:5:4.14:11,0,4	1/1:14,0:14:8.78:33,9,0	1/1:11,1:12:23.93:135,24,0	1/1:11,0:11:7.54:21,8,0	1/1:2,0:2:4.82:17,5,0
chr10	90402365	.	A	AC	6957.59	PASS	AB=0.731;AC=51;AF=0.944;AN=54;BaseQRankSum=-2.981;DP=307;FS=45.259;HRun=4;HaplotypeScore=109.7470;InbreedingCoeff=0.0785;MQ=53.50;MQ0=0;MQRankSum=-3.419;QD=23.11;ReadPosRankSum=2.713;VQSLOD=1.8635;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:18:24.55:328,25,0	1/1:1,6:7:15.05:206,15,0	0/1:11,1:11:12.37:120,0,12	0/1:7,3:8:36.45:124,0,36	0/1:0,15:15:0:0,0,0	1/1:0,6:6:12.04:150,12,0	1/1:0,8:8:18.01:210,18,0	1/1:1,14:15:39.13:532,39,0	1/1:0,10:10:21.07:286,21,0	1/1:0,21:21:60.20:819,60,0	1/1:0,10:10:9.16:119,9,0	1/1:0,12:12:20.98:244,21,0	1/1:0,10:10:12:136,12,0	1/1:0,11:11:20.98:239,21,0	1/1:1,18:19:36.02:401,36,0	1/1:0,19:19:45.06:538,45,0	1/1:0,2:2:6.02:75,6,0	1/1:1,7:8:21.07:287,21,0	1/1:0,15:15:45.15:615,45,0	1/1:0,14:14:11.83:155,12,0	./.	1/1:0,7:7:6.02:82,6,0	1/1:0,10:10:3.48:42,3,0	1/1:0,5:5:6.02:69,6,0	1/1:1,10:11:18.06:233,18,0	1/1:0,12:12:36.12:491,36,0	1/1:0,11:11:27.04:333,27,0	1/1:0,3:3:9.03:126,9,0
chr10	90402394	.	C	CCA	2040.18	PASS	AB=0.890;AC=54;AF=0.964;AN=56;BaseQRankSum=2.533;DP=250;FS=30.943;HRun=0;HaplotypeScore=143.2422;InbreedingCoeff=-0.0596;MQ=50.29;MQ0=1;MQRankSum=-2.838;QD=8.16;ReadPosRankSum=3.327;VQSLOD=1.6335;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:38.95:145,39,0	1/1:11,0:11:28.46:105,28,0	0/1:20,2:12:5.55:140,0,6	0/1:15,2:14:45.75:132,0,46	1/1:11,0:11:23.76:100,24,0	1/1:4,0:4:10.39:39,10,0	1/1:5,0:5:10.39:39,10,0	1/1:6,0:6:10.64:33,11,0	1/1:7,0:7:18.17:67,18,0	1/1:18,0:18:39.13:146,39,0	1/1:5,0:5:10.78:51,11,0	1/1:7,0:7:16.28:78,16,0	1/1:8,0:8:18.17:67,18,0	1/1:7,0:7:12.98:48,13,0	1/1:18,0:18:39.44:163,39,0	1/1:13,0:13:31.55:129,32,0	1/1:2,0:2:2.99:23,3,0	1/1:6,0:6:12.98:48,13,0	1/1:9,0:9:22.98:95,23,0	1/1:8,0:8:21.47:97,21,0	1/1:6,0:6:10.39:39,10,0	1/1:5,0:5:8.10:36,8,0	1/1:6,0:6:13.06:50,13,0	1/1:4,0:4:9.34:33,9,0	1/1:10,0:10:23.66:99,24,0	1/1:11,0:11:18.08:73,18,0	1/1:4,0:4:10.39:39,10,0	1/1:1,0:1:2.98:22,3,0
chr10	90402395	.	C	CA	8060.24	PASS	AB=0.781;AC=52;AF=0.929;AN=56;BaseQRankSum=-1.791;DP=247;FS=57.231;HRun=1;HaplotypeScore=115.3360;InbreedingCoeff=-0.0880;MQ=45.10;MQ0=1;MQRankSum=-3.468;QD=32.63;ReadPosRankSum=5.525;VQSLOD=0.3567;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:45.15:667,45,0	1/1:0,11:11:29.76:445,30,0	0/1:16,4:11:89.35:89,0,109	0/1:19,0:14:55.09:55,0,180	1/1:0,11:11:30.06:415,30,0	1/1:0,4:4:12.04:178,12,0	1/1:0,5:5:15.01:198,15,0	1/1:1,5:6:15.05:224,15,0	1/1:0,7:7:21.07:312,21,0	1/1:1,16:17:48.16:703,48,0	1/1:0,5:5:15.01:193,15,0	1/1:1,6:7:4.48:220,4,0	1/1:0,8:8:24.05:333,24,0	1/1:1,6:7:18:243,18,0	1/1:5,13:18:28.44:547,28,0	1/1:0,13:13:39.10:550,39,0	0/1:1,1:2:6:33,0,6	1/1:1,5:6:18.03:244,18,0	1/1:0,9:9:27.09:397,27,0	1/1:1,7:8:7.53:289,8,0	1/1:1,5:6:17.97:218,18,0	0/1:2,3:5:1.36:114,0,1	1/1:1,5:6:18.02:241,18,0	1/1:1,3:4:9.03:134,9,0	1/1:0,10:10:30.06:414,30,0	1/1:2,9:11:17.58:385,18,0	1/1:0,4:4:12.04:178,12,0	1/1:0,1:1:3.01:40,3,0
chr10	90402400	.	AC	A	3972.33	PASS	AB=0.958;AC=54;AF=0.964;AN=56;BaseQRankSum=3.387;DP=240;FS=24.973;HRun=2;HaplotypeScore=104.0353;InbreedingCoeff=-0.0544;MQ=45.28;MQ0=3;MQRankSum=-2.706;QD=16.55;ReadPosRankSum=2.759;VQSLOD=2.4487;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,1:17:41.84:327,42,0	1/1:12,0:12:32.89:262,33,0	0/1:20,2:12:58.25:71,0,58	0/1:19,0:13:35.62:36,0,66	1/1:11,0:11:26.83:203,27,0	1/1:4,0:4:11.95:93,12,0	1/1:5,0:5:11.95:93,12,0	1/1:5,0:5:11.43:61,11,0	1/1:7,0:7:20.92:163,21,0	1/1:17,0:17:42.65:313,43,0	1/1:5,0:5:11.89:87,12,0	1/1:6,0:6:14.88:110,15,0	1/1:8,0:8:20.92:163,21,0	1/1:6,0:6:14.94:116,15,0	1/1:15,0:15:40.51:290,41,0	1/1:13,0:13:35.80:274,36,0	1/1:1,1:2:2.92:17,3,0	1/1:6,0:6:14.94:117,15,0	1/1:10,0:9:23.91:187,24,0	1/1:7,0:7:20.83:157,21,0	1/1:6,0:6:11.95:93,12,0	1/1:4,0:4:5.98:47,6,0	1/1:5,1:6:14.95:118,15,0	1/1:3,0:3:8.97:70,9,0	1/1:10,0:10:26.84:203,27,0	1/1:9,0:9:23.91:188,24,0	1/1:4,0:4:11.95:94,12,0	1/1:1,0:1:2.94:18,3,0
chr10	90402401	.	C	CA	8199.86	PASS	AB=0.879;AC=54;AF=0.964;AN=56;BaseQRankSum=0.519;DP=222;FS=34.513;HRun=1;HaplotypeScore=82.2147;InbreedingCoeff=-0.0692;MQ=46.10;MQ0=3;MQRankSum=-1.919;QD=36.94;ReadPosRankSum=2.999;VQSLOD=2.6156;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:42.14:667,42,0	1/1:2,11:13:33.11:524,33,0	0/1:14,4:11:28.83:176,0,29	0/1:18,0:13:49:49,0,53	1/1:0,11:11:27.09:422,27,0	1/1:0,4:4:12.04:191,12,0	1/1:0,4:4:12.04:191,12,0	1/1:0,2:2:6.02:95,6,0	1/1:0,7:7:21.07:334,21,0	1/1:0,15:15:42.14:648,42,0	1/1:0,4:4:12.04:183,12,0	1/1:0,5:5:15.05:231,15,0	1/1:0,7:7:21.07:334,21,0	1/1:0,5:5:15.05:238,15,0	1/1:1,14:15:42.14:660,42,0	1/1:0,12:12:36.12:566,36,0	1/1:1,1:2:3.01:42,3,0	1/1:0,5:5:15.05:239,15,0	1/1:3,7:8:24.08:382,24,0	1/1:0,7:7:21.07:326,21,0	1/1:0,5:5:12.04:191,12,0	1/1:0,2:2:6.02:95,6,0	1/1:1,4:5:15.05:238,15,0	1/1:0,3:3:9.03:143,9,0	1/1:0,9:9:27.09:421,27,0	1/1:0,8:8:24.08:381,24,0	1/1:0,4:4:12.04:191,12,0	1/1:0,1:1:3.01:42,3,0
chr10	90460954	.	A	ATGACC	763.69	PASS	AB=1.000;AC=10;AF=0.185;AN=54;BaseQRankSum=1.340;DP=443;FS=19.816;HRun=0;HaplotypeScore=136.7148;InbreedingCoeff=0.6933;MQ=54.18;MQ0=24;MQRankSum=-5.317;QD=14.14;ReadPosRankSum=-0.789;VQSLOD=1.7170;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:42.14:0,42,847	0/0:7,0:6:15.05:0,15,305	0/0:29,0:22:60.19:0,60,1133	0/0:24,0:20:57.20:0,57,1156	0/0:16,0:16:3.01:0,3,61	0/0:17,0:17:21.07:0,21,428	0/0:26,0:25:51.13:0,51,1021	0/0:15,0:15:39.10:0,39,687	0/0:16,0:15:27.09:0,27,549	1/1:1,2:2:3.01:91,3,0	1/1:1,3:4:3.01:90,3,0	0/0:31,0:31:14.88:0,15,304	0/0:11,0:10:12.04:0,12,244	0/0:14,0:10:15.05:0,15,282	0/0:24,0:23:30.09:0,30,549	1/1:2,10:11:21.07:441,21,0	0/0:23,0:23:54.14:0,54,1078	1/1:2,3:4:9.03:272,9,0	0/0:11,0:10:30.06:0,30,555	0/0:16,0:12:6.02:0,6,99	0/0:34,0:34:59.56:0,60,1221	0/0:17,0:16:6.02:0,6,122	0/1:13,0:13:0:0,0,0	0/1:17,0:17:0:0,0,0	0/0:0,2:1:0:0,0,0	0/0:13,0:12:21.07:0,21,429	0/0:12,0:12:27.09:0,27,549	./.
chr10	90460971	.	GTATA	G	2727.91	PASS	AB=1.000;AC=19;AF=0.380;AN=50;BaseQRankSum=-2.801;DP=428;FS=2.260;HRun=0;HaplotypeScore=121.9614;InbreedingCoeff=0.2794;MQ=52.09;MQ0=7;MQRankSum=0.973;QD=13.99;ReadPosRankSum=1.009;VQSLOD=3.5253;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:32.84:0,33,448	0/0:5,0:5:12.04:0,12,188	0/0:42,0:21:50.94:0,51,893	0/0:36,0:23:66.16:0,66,1256	0/0:15,0:15:2.92:0,3,17	1/1:18,0:18:18.06:285,18,0	1/1:23,0:23:17.26:427,17,0	1/1:3,13:16:3.44:525,3,0	0/1:19,0:17:12.96:238,0,13	0/0:2,0:2:0.89:0,1,2	./.	0/1:21,0:21:9.60:45,0,10	0/1:8,0:7:2.23:96,0,2	0/1:10,0:9:28.44:36,0,28	0/0:23,0:23:19.18:0,19,129	./.	0/0:21,0:21:30.45:0,30,394	0/0:4,0:4:2.19:0,2,5	1/1:1,6:7:2.38:270,2,0	0/0:11,0:11:2.94:0,3,18	1/1:31,0:31:15.03:476,15,0	1/1:15,0:15:3.01:47,3,0	0/0:0,9:9:0:0,0,0	0/0:17,0:17:3.41:0,3,19	0/1:3,0:1:0:0,0,0	0/1:12,0:12:13.36:244,0,13	0/1:12,0:12:32.44:189,0,32	./.
chr10	90460972	.	T	TACAC	747.25	PASS	AB=0.848;AC=27;AF=0.540;AN=50;BaseQRankSum=2.946;DP=440;FS=1.891;HRun=0;HaplotypeScore=135.8444;InbreedingCoeff=0.5359;MQ=50.59;MQ0=9;MQRankSum=-0.075;QD=3.13;ReadPosRankSum=-1.010;VQSLOD=2.2348;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:33.04:0,33,413	0/0:5,0:5:12.04:0,12,162	0/0:42,0:21:48.64:0,49,941	0/0:36,0:23:66.18:0,66,1156	1/1:14,0:14:2.98:22,3,0	1/1:19,0:18:0.03:1,0,0	1/1:22,0:22:2.36:39,2,0	1/1:16,0:16:3.32:73,3,0	1/1:17,0:18:12.86:91,13,0	0/0:2,0:2:3.01:0,3,38	./.	0/1:4,13:24:1.05:66,0,1	1/1:9,0:8:4.40:30,4,0	1/1:7,1:8:4.90:121,5,0	0/0:22,0:22:27.08:0,27,417	0/1:12,0:11:0:0,0,0	0/0:20,0:20:33.09:0,33,440	0/0:4,0:4:9.03:0,9,120	1/1:8,0:7:6.54:77,7,0	1/1:3,0:14:3.01:52,3,0	1/1:32,0:32:18.40:218,18,0	1/1:15,0:15:1.55:4,2,0	0/0:9,0:9:0:0,0,0	./.	0/0:3,0:1:0.47:0,0,1	1/1:12,0:12:3.47:71,3,0	0/1:13,0:13:2.02:34,0,2	./.
chr10	90460976	.	TACACAC	T	563.32	PASS	AB=1.000;AC=10;AF=0.200;AN=50;BaseQRankSum=-1.277;DP=470;FS=15.023;HRun=0;HaplotypeScore=139.6764;InbreedingCoeff=0.5168;MQ=48.50;MQ0=16;MQRankSum=-2.497;QD=5.07;ReadPosRankSum=3.922;VQSLOD=1.8108;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:32:3.01:37,3,0	./.	0/0:37,0:16:9.03:0,9,229	0/0:33,0:20:18.02:0,18,355	0/0:15,0:13:6.02:0,6,147	0/1:21,0:20:0:0,0,0	0/0:21,0:20:3.01:0,3,72	0/0:20,0:19:17.09:0,17,381	0/0:21,0:19:12.04:0,12,302	0/0:4,0:3:3.01:0,3,80	./.	0/0:19,0:19:9.03:0,9,228	0/0:10,0:9:9.03:0,9,198	0/0:12,0:11:6.02:0,6,156	1/1:8,15:23:21.07:433,21,0	0/0:18,0:16:9.50:0,9,199	1/1:15,4:19:17.96:215,18,0	0/0:6,0:6:5.99:0,6,99	0/0:10,0:8:3.01:0,3,76	0/0:13,0:13:6.02:0,6,155	0/0:36,0:35:27.05:0,27,717	./.	0/1:12,0:11:0:0,0,0	0/0:22,0:22:5.76:0,6,105	1/1:4,0:2:0.47:1,0,0	0/0:15,0:15:30.53:0,31,671	0/0:16,0:15:11.07:0,11,223	0/0:1,0:1:3.01:0,3,66
chr10	90461251	.	AT	A	4410.87	PASS	AB=0.968;AC=53;AF=0.946;AN=56;BaseQRankSum=2.350;DP=443;FS=6.690;HRun=2;HaplotypeScore=139.8152;InbreedingCoeff=0.5143;MQ=51.47;MQ0=7;MQRankSum=-0.745;QD=10.58;ReadPosRankSum=1.429;VQSLOD=2.9004;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:32.86:216,33,0	1/1:6,0:6:11.98:53,12,0	0/1:29,1:8:14.30:14,0,87	0/0:25,0:13:8.48:0,8,91	1/1:19,0:19:40.46:194,40,0	1/1:13,0:12:29.22:154,29,0	1/1:9,0:7:16.27:66,16,0	1/1:21,0:18:44.46:229,44,0	1/1:24,0:23:57.12:314,57,0	1/1:3,6:10:23.39:103,23,0	1/1:7,13:20:40.31:153,40,0	1/1:17,0:17:42.65:223,43,0	1/1:16,0:16:44.18:242,44,0	1/1:14,0:13:31.78:148,32,0	1/1:22,0:21:18.62:143,19,0	1/1:10,1:12:27.34:167,27,0	1/1:20,2:22:30.48:163,30,0	1/1:8,0:7:11.08:65,11,0	1/1:14,0:14:34.83:242,35,0	1/1:12,0:12:27.41:131,27,0	1/1:4,0:3:5.96:44,6,0	1/1:19,0:18:47.06:225,47,0	1/1:15,0:15:36.69:191,37,0	1/1:10,0:9:19.81:122,20,0	1/1:6,4:10:24.64:146,25,0	1/1:26,0:26:62.21:349,62,0	1/1:19,0:19:49.04:254,49,0	1/1:7,0:7:13.09:61,13,0
chr10	90461252	.	T	TA	1301.62	PASS	AB=0.764;AC=48;AF=0.857;AN=56;BaseQRankSum=9.795;DP=447;FS=1.656;HRun=1;HaplotypeScore=150.0567;InbreedingCoeff=0.4409;MQ=50.03;MQ0=9;MQRankSum=-7.176;QD=3.25;ReadPosRankSum=3.803;VQSLOD=0.4211;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:16.87:0,17,78	0/1:1,5:6:1.71:40,0,2	0/1:32,0:7:2.63:3,0,127	0/0:26,0:12:14.55:0,15,152	1/1:19,0:19:24.38:88,24,0	1/1:13,0:12:18.95:65,19,0	1/1:9,0:7:10.89:36,11,0	1/1:21,0:18:19.56:73,20,0	1/1:23,0:22:30.28:121,30,0	1/1:10,0:10:17.31:61,17,0	1/1:21,0:21:28.41:89,28,0	1/1:16,0:16:19.31:69,19,0	1/1:16,0:16:19.03:74,19,0	1/1:14,0:13:22.45:74,22,0	0/1:8,17:24:7.64:8,0,8	1/1:12,0:12:15.93:82,16,0	0/1:20,1:22:9.35:9,0,54	1/1:8,0:7:0.43:3,0,0	1/1:14,0:13:11.81:38,12,0	1/1:12,0:12:15.02:51,15,0	1/1:4,0:3:3.46:25,3,0	1/1:19,0:18:26.53:94,27,0	1/1:15,0:15:10.09:51,10,0	1/1:9,0:8:0.79:9,1,0	1/1:10,0:10:9.90:49,10,0	1/1:26,0:26:19.19:96,19,0	1/1:19,0:19:30.91:110,31,0	1/1:6,0:6:7.64:26,8,0
chr10	90461258	.	A	AC	5119.73	PASS	AB=0.932;AC=42;AF=0.750;AN=56;BaseQRankSum=9.009;DP=507;FS=10.027;HRun=0;HaplotypeScore=156.5821;InbreedingCoeff=0.7822;MQ=47.57;MQ0=14;MQRankSum=-6.454;QD=14.46;ReadPosRankSum=6.097;VQSLOD=5.7388;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:48.61:0,49,423	0/0:6,0:6:10.71:0,11,73	0/0:40,0:6:13.94:0,14,102	0/0:36,0:15:2.01:0,2,110	1/1:7,14:20:48.12:321,48,0	1/1:6,10:15:34.56:246,35,0	1/1:9,5:13:21.39:148,21,0	1/1:16,11:25:51.36:345,51,0	1/1:9,14:22:60.14:416,60,0	1/1:15,0:15:6.53:134,7,0	1/1:20,3:23:50.16:336,50,0	1/1:9,9:18:49.82:347,50,0	1/1:5,9:13:38.55:272,39,0	1/1:4,10:13:35.42:248,35,0	0/0:23,0:22:31.04:0,31,239	0/1:16,1:18:18.66:125,0,19	0/0:28,0:27:58.58:0,59,451	1/1:6,2:7:9.97:61,10,0	1/1:10,5:12:18.66:161,19,0	1/1:8,8:15:33.26:244,33,0	0/1:5,0:5:1.49:1,0,2	1/1:6,12:18:45.65:330,46,0	1/1:9,8:17:38.38:272,38,0	1/1:8,3:10:21.93:129,22,0	1/1:8,0:8:15.77:103,16,0	1/1:12,15:26:64.41:450,64,0	1/1:3,14:17:45.35:322,45,0	1/1:4,4:8:16.23:109,16,0
chr10	90461259	.	A	ACAAAC	6560.62	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=5.302;DP=510;FS=2.283;HRun=0;HaplotypeScore=194.5628;InbreedingCoeff=0.9423;MQ=47.25;MQ0=14;MQRankSum=-8.047;QD=18.38;ReadPosRankSum=5.051;VQSLOD=4.6316;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.08:0,54,823	0/0:6,0:6:15.04:0,15,254	0/0:40,0:5:9.27:0,9,109	0/0:36,0:15:10.94:0,11,165	1/1:21,0:20:48.26:327,48,0	1/1:16,0:15:38.02:265,38,0	1/1:12,0:13:26.01:234,26,0	1/1:26,0:24:59.26:437,59,0	1/1:22,0:21:57.68:362,58,0	1/1:10,6:16:15.36:361,15,0	1/1:9,13:23:61.84:781,62,0	1/1:18,0:18:52.26:366,52,0	1/1:14,0:13:37.69:208,38,0	1/1:14,0:13:38.17:297,38,0	0/0:21,0:20:24.85:0,25,284	1/1:18,1:18:44.53:584,45,0	0/0:29,0:28:63.64:0,64,852	1/1:8,0:7:15.41:168,15,0	1/1:15,0:12:24.12:183,24,0	1/1:16,0:15:29.88:187,30,0	1/1:6,0:6:4.82:24,5,0	1/1:17,0:17:45.41:244,45,0	1/1:17,0:17:42.54:229,43,0	1/1:11,0:10:22.49:143,22,0	1/1:8,4:12:20.64:305,21,0	1/1:27,0:26:62.95:458,63,0	1/1:17,0:17:46.39:270,46,0	1/1:8,0:8:20.51:128,21,0
chr10	90461261	.	A	AC	1758.39	PASS	AB=0.875;AC=39;AF=0.696;AN=56;BaseQRankSum=12.187;DP=521;FS=40.929;HRun=0;HaplotypeScore=166.2443;InbreedingCoeff=0.5419;MQ=45.44;MQ0=16;MQRankSum=-6.590;QD=4.51;ReadPosRankSum=7.274;VQSLOD=1.5271;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:49.24:0,49,441	0/0:6,0:6:10.71:0,11,73	0/1:44,0:4:1.87:2,0,45	0/0:37,0:14:16.79:0,17,117	1/1:7,14:20:18.95:120,19,0	1/1:8,10:17:25.85:109,26,0	1/1:12,4:15:27.13:141,27,0	1/1:16,11:25:28.55:181,29,0	1/1:6,14:19:21.80:128,22,0	0/1:16,0:16:38.47:38,0,67	1/1:24,1:25:19.59:150,20,0	1/1:7,9:16:16.01:104,16,0	1/1:5,9:13:2.21:54,2,0	1/1:4,10:13:24.83:116,25,0	0/0:20,0:19:24.09:0,24,169	0/0:20,0:19:0.26:0,0,78	0/0:29,0:28:66.97:0,67,517	0/1:7,2:8:10.38:10,0,24	0/1:12,5:14:2.22:44,0,2	1/1:9,8:16:6.26:89,6,0	1/1:6,0:6:11.23:61,11,0	1/1:4,12:16:14.72:78,15,0	1/1:9,8:17:9.22:80,9,0	0/1:8,3:10:6.21:35,0,6	1/1:12,0:12:13.60:49,14,0	1/1:13,15:27:18.45:150,18,0	1/1:3,14:17:32.66:139,33,0	1/1:5,4:9:14.63:64,15,0
chr10	90461264	.	A	AC	723.84	PASS	AB=0.714;AC=28;AF=0.500;AN=56;BaseQRankSum=9.822;DP=542;FS=11.190;HRun=0;HaplotypeScore=170.4159;InbreedingCoeff=0.5797;MQ=48.03;MQ0=16;MQRankSum=-5.921;QD=2.49;ReadPosRankSum=5.561;VQSLOD=2.1634;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:49.19:0,49,433	0/0:6,0:6:10.56:0,11,72	0/0:50,0:7:15.47:0,15,147	0/0:36,0:14:6.37:0,6,79	1/1:11,11:21:5.09:44,5,0	1/1:12,8:19:21.45:78,21,0	1/1:15,2:16:15.17:81,15,0	1/1:21,8:27:15.48:150,15,0	0/1:11,9:19:1.92:38,0,2	0/0:18,0:18:51.95:0,52,358	0/0:27,0:27:61.40:0,61,333	0/1:9,8:17:4.19:42,0,4	0/1:8,7:14:3.52:4,0,15	1/1:6,9:14:8.67:49,9,0	0/0:20,0:19:25.02:0,25,184	0/0:23,0:22:40.10:0,40,263	0/0:29,0:28:68.65:0,69,529	0/0:9,0:8:14.89:0,15,107	0/1:14,3:14:2.67:38,0,3	0/1:8,6:13:0.17:55,0,0	1/1:6,0:6:7.71:41,8,0	1/1:6,10:16:2.54:36,3,0	0/1:9,8:17:1.88:43,0,2	1/1:11,1:11:2.76:35,3,0	0/0:14,0:14:20.35:0,20,133	1/1:13,13:25:6.68:91,7,0	1/1:7,12:19:4.46:38,4,0	1/1:7,2:9:11.99:50,12,0
chr10	90461272	.	ACC	A	5874.60	PASS	AB=0.960;AC=46;AF=0.821;AN=56;BaseQRankSum=7.320;DP=527;FS=28.530;HRun=2;HaplotypeScore=146.7253;InbreedingCoeff=0.6056;MQ=50.11;MQ0=16;MQRankSum=-7.776;QD=13.57;ReadPosRankSum=4.248;VQSLOD=0.4022;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:56.14:0,56,735	0/0:7,0:7:4.72:0,5,140	0/1:42,3:8:20.71:21,0,121	0/0:34,0:13:3.94:0,4,73	1/1:22,0:21:43.06:354,43,0	1/1:20,0:19:38.47:274,38,0	1/1:16,0:15:24.91:203,25,0	1/1:30,0:29:75:540,75,0	1/1:16,0:15:41.13:266,41,0	1/1:17,1:18:52.97:444,53,0	1/1:29,0:29:52.06:464,52,0	1/1:17,0:17:38.31:267,38,0	1/1:12,0:11:27.13:164,27,0	1/1:14,0:13:37.74:242,38,0	0/1:18,0:18:22.10:22,0,152	1/1:23,1:23:40.89:323,41,0	0/0:32,1:32:3.09:0,3,765	1/1:9,0:8:11.99:106,12,0	1/1:15,0:12:16.58:159,17,0	1/1:15,0:14:38.42:274,38,0	1/1:8,0:8:11.92:89,12,0	1/1:15,1:16:47.42:344,47,0	1/1:16,0:16:38.50:278,39,0	1/1:9,0:8:14.92:116,15,0	1/1:15,0:15:20.79:156,21,0	1/1:23,0:22:54.43:381,54,0	1/1:18,0:18:43.91:270,44,0	1/1:7,0:7:14.50:118,14,0
chr10	90461273	.	CCA	C	9361.29	PASS	AB=0.989;AC=46;AF=0.821;AN=56;BaseQRankSum=7.076;DP=520;FS=30.699;HRun=0;HaplotypeScore=133.4295;InbreedingCoeff=0.7292;MQ=50.25;MQ0=15;MQRankSum=-7.753;QD=21.87;ReadPosRankSum=3.854;VQSLOD=3.2389;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:56.53:0,57,863	0/0:7,0:7:13.86:0,14,168	0/1:43,0:8:32.37:32,0,149	0/0:32,0:12:2.17:0,2,54	1/1:3,19:21:53.87:532,54,0	1/1:2,18:19:38.71:459,39,0	1/1:5,11:15:20.14:296,20,0	1/1:6,24:29:77.10:978,77,0	1/1:5,11:15:39.65:356,40,0	1/1:2,16:18:51.44:610,51,0	1/1:4,25:29:53.32:690,53,0	1/1:1,16:17:38.70:443,39,0	1/1:2,10:11:29.02:280,29,0	1/1:2,12:13:38.58:417,39,0	0/1:16,0:16:2.54:3,0,89	1/1:4,19:22:38.90:445,39,0	0/0:32,1:32:36.51:0,37,833	1/1:4,5:8:12.01:150,12,0	1/1:6,9:12:29.44:355,29,0	1/1:1,14:14:38.84:455,39,0	1/1:0,8:8:12.04:167,12,0	1/1:4,12:16:44.44:461,44,0	1/1:0,16:16:39.11:470,39,0	1/1:2,7:8:13.85:147,14,0	1/1:0,15:15:21.05:247,21,0	1/1:2,21:22:62.30:707,62,0	1/1:2,16:18:45.93:438,46,0	1/1:2,5:7:20.40:222,20,0
chr10	90461419	.	C	CA	2045.84	PASS	AB=0.805;AC=48;AF=0.857;AN=56;BaseQRankSum=1.500;DP=536;FS=1.998;HRun=18;HaplotypeScore=101.0670;InbreedingCoeff=-0.0264;MQ=71.97;MQ0=2;MQRankSum=0.318;QD=3.82;ReadPosRankSum=-3.488;VQSLOD=-0.5251;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:30:44.08:237,44,0	1/1:11,0:11:16.08:78,16,0	0/1:20,0:13:0:0,0,0	0/1:13,0:11:0.99:1,0,7	1/1:12,2:15:20.48:127,20,0	0/1:13,8:22:14.24:24,0,14	0/1:18,10:30:17.90:58,0,18	1/1:31,3:34:24.98:137,25,0	1/1:15,0:15:3.28:78,3,0	1/1:13,0:13:5.92:39,6,0	1/1:13,10:23:15.63:100,16,0	1/1:17,0:16:28.91:167,29,0	1/1:11,0:11:5.89:39,6,0	1/1:9,1:10:13.28:75,13,0	1/1:27,0:27:43.83:218,44,0	1/1:8,8:16:8.92:64,9,0	1/1:7,0:19:8.48:41,8,0	1/1:12,0:13:5.84:36,6,0	1/1:10,6:16:6.06:91,6,0	1/1:14,12:27:23.82:144,24,0	1/1:3,4:7:6.42:43,6,0	0/1:21,0:23:4.10:54,0,4	0/1:16,10:26:5.17:28,0,5	1/1:14,1:16:6.53:54,7,0	0/1:12,9:21:13.65:46,0,14	1/1:26,1:27:8.27:75,8,0	1/1:15,1:15:15.81:92,16,0	0/1:5,6:12:16.92:24,0,17
chr10	90462799	.	TTAGACCCTTTC	T	31032.68	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=14.853;DP=705;FS=2.586;HRun=0;HaplotypeScore=247.0237;InbreedingCoeff=0.9922;MQ=81.57;MQ0=3;MQRankSum=-14.400;QD=57.36;ReadPosRankSum=2.444;VQSLOD=4.5625;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,5697	0/0:13,0:13:39.11:0,39,1899	0/0:31,0:31:66.14:0,66,2632	0/0:24,0:23:54.19:0,54,2387	1/1:13,24:36:57.02:1413,57,0	1/1:3,30:33:72.25:2310,72,0	1/1:11,15:26:36.12:1218,36,0	1/1:11,25:36:75.01:1448,75,0	1/1:6,20:26:48.16:1624,48,0	1/1:4,26:30:75.24:2363,75,0	1/1:0,19:19:39.05:1156,39,0	1/1:4,26:31:72.25:2335,72,0	1/1:4,17:21:48.15:1543,48,0	1/1:2,19:21:45.12:1519,45,0	0/0:23,0:23:66.16:0,66,3402	1/1:6,28:34:57.13:1845,57,0	0/0:33,0:33:93.32:0,93,4925	1/1:1,11:12:24.08:750,24,0	1/1:4,15:19:44.99:971,45,0	1/1:7,20:26:57.16:1740,57,0	1/1:9,15:23:15.05:301,15,0	1/1:3,19:22:45.15:1398,45,0	1/1:5,19:24:39.13:1268,39,0	1/1:9,15:24:21.03:710,21,0	1/1:4,20:24:51.17:1663,51,0	1/1:5,24:29:69.16:1977,69,0	1/1:1,16:17:30.10:1015,30,0	1/1:0,5:5:15.05:468,15,0
chr10	90463048	.	CAAGT	C	3112.38	PASS	AB=0.535;AC=5;AF=0.089;AN=56;BaseQRankSum=-2.534;DP=823;FS=11.103;HRun=0;HaplotypeScore=170.5520;InbreedingCoeff=0.7830;MQ=84.02;MQ0=3;MQRankSum=-3.384;QD=42.06;ReadPosRankSum=4.145;VQSLOD=3.7207;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:99:0,141,3701	1/1:2,13:14:36.12:672,36,0	0/0:32,0:32:81.14:0,81,2009	0/0:27,0:27:69.23:0,69,1643	0/0:31,0:31:81.28:0,81,2093	0/0:31,0:31:90.27:0,90,2339	0/0:18,0:18:51.15:0,51,1303	0/0:25,0:25:72.25:0,72,1881	0/0:35,0:35:99:0,105,2677	0/0:41,0:41:99:0,108,2802	0/0:24,0:24:69.24:0,69,1824	0/0:33,0:33:93.31:0,93,2392	0/0:31,0:31:90.29:0,90,2274	0/0:34,0:34:99:0,99,2540	1/1:3,33:34:84.29:1568,84,0	0/0:45,0:45:99:0,129,3259	0/1:3,20:23:19.82:1003,0,20	0/0:20,0:20:60.21:0,60,1577	0/0:23,0:23:60.20:0,60,1508	0/0:37,0:37:99:0,108,2779	0/0:23,0:23:66.21:0,66,1649	0/0:31,0:31:81.26:0,81,2100	0/0:24,0:24:66.23:0,66,1760	0/0:22,0:22:66.23:0,66,1733	0/0:26,0:26:72.25:0,72,1896	0/0:33,0:33:96.32:0,96,2442	0/0:36,0:36:99:0,108,2818	0/0:20,0:20:54.19:0,54,1440
chr10	90464441	.	T	TG	4127.08	PASS	AB=0.710;AC=24;AF=0.429;AN=56;BaseQRankSum=3.013;DP=591;FS=25.227;HRun=1;HaplotypeScore=143.7094;InbreedingCoeff=0.4634;MQ=81.86;MQ0=0;MQRankSum=-3.269;QD=11.93;ReadPosRankSum=-0.729;VQSLOD=0.6867;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:69.66:0,70,544	0/0:11,0:11:26.54:0,27,256	0/0:22,0:22:51.08:0,51,731	0/0:15,0:15:40.36:0,40,467	0/1:17,4:21:1.54:112,0,2	0/1:8,7:15:4.50:207,0,5	0/1:5,16:21:35.93:249,0,36	1/1:12,11:23:8.87:347,9,0	1/1:10,13:23:14.75:384,15,0	0/0:32,0:33:5.21:0,5,216	0/0:12,0:12:23.62:0,24,127	0/1:11,13:24:5.12:397,0,5	0/1:10,12:22:0.40:246,0,0	1/1:9,10:19:37.83:342,38,0	0/0:40,0:40:99:0,101,683	0/0:23,0:24:52.48:0,52,282	0/0:33,0:33:90.51:0,91,546	0/0:8,0:8:17.82:0,18,97	0/0:6,0:6:9.69:0,10,54	0/1:10,3:13:9.10:55,0,9	0/1:19,12:31:2.94:293,0,3	0/1:11,4:15:14.50:92,0,14	1/1:6,10:16:7.92:204,8,0	1/1:3,25:28:35.10:377,35,0	0/0:11,0:11:19.14:0,19,103	1/1:15,7:23:4.91:167,5,0	1/1:3,30:33:25:384,25,0	1/1:3,15:18:1.54:271,2,0
chr10	90464442	.	A	AG	7395.39	PASS	AB=0.928;AC=39;AF=0.696;AN=56;BaseQRankSum=-6.224;DP=598;FS=22.758;HRun=9;HaplotypeScore=139.5702;InbreedingCoeff=0.5292;MQ=81.01;MQ0=0;MQRankSum=-4.325;QD=15.38;ReadPosRankSum=-0.134;VQSLOD=3.3497;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:15,19:34:3.86:417,0,4	1/1:6,5:11:18:178,18,0	0/0:22,0:22:41.34:0,41,333	0/0:15,0:15:32.89:0,33,271	1/1:21,0:20:7.40:173,7,0	1/1:14,0:14:9.38:264,9,0	0/1:20,0:20:33.86:256,0,34	1/1:26,0:26:16.66:441,17,0	1/1:23,0:23:21.55:440,22,0	0/0:32,0:32:53.32:0,53,266	0/0:14,0:14:23.06:0,23,124	1/1:24,0:24:5.37:407,5,0	1/1:23,0:23:9.26:324,9,0	1/1:19,0:19:40.74:372,41,0	1/1:6,34:40:64.19:936,64,0	0/0:24,0:24:29.25:0,29,236	1/1:4,30:34:87.92:958,88,0	0/1:8,0:8:4.84:5,0,74	0/1:7,0:7:5.66:6,0,41	1/1:14,0:14:5.15:150,5,0	1/1:31,0:31:6.43:341,6,0	0/1:14,0:14:13.53:106,0,14	1/1:17,0:17:8.05:216,8,0	1/1:28,0:28:36.10:398,36,0	0/0:10,0:10:13.09:0,13,85	1/1:24,0:24:14.77:281,15,0	1/1:34,0:34:31.19:443,31,0	1/1:15,0:15:2.09:285,2,0
chr10	90464849	.	AG	A	10946.37	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=10.542;DP=675;FS=6.000;HRun=6;HaplotypeScore=174.3594;InbreedingCoeff=0.9986;MQ=58.56;MQ0=4;MQRankSum=5.663;QD=29.19;ReadPosRankSum=0.657;VQSLOD=2.5332;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,117,1544	0/0:13,0:13:39.13:0,39,513	0/0:26,0:16:42.09:0,42,522	0/0:24,0:19:51.16:0,51,648	1/1:0,28:28:81.20:871,81,0	1/1:1,29:30:87.22:935,87,0	1/1:2,9:11:21.05:226,21,0	1/1:2,24:26:69.13:727,69,0	1/1:1,18:19:48.12:516,48,0	0/0:29,0:29:87.28:0,87,1141	0/0:23,0:23:63.20:0,63,828	1/1:2,21:23:63.16:677,63,0	1/1:1,20:21:57.14:613,57,0	1/1:1,23:24:63.16:677,63,0	0/0:17,0:17:45.15:0,45,592	0/0:31,0:31:81.26:0,81,1066	0/0:37,0:37:99:0,111,1428	0/0:26,0:26:69.16:0,69,872	1/1:3,9:11:27.07:290,27,0	1/1:1,31:32:90.23:967,90,0	1/1:1,12:12:33.08:355,33,0	1/1:0,24:24:69.17:742,69,0	1/1:0,19:19:54.14:580,54,0	1/1:3,23:26:66.16:709,66,0	0/0:28,0:28:81.26:0,81,1066	1/1:2,36:38:99:1128,105,0	1/1:1,21:22:66.17:709,66,0	1/1:0,7:7:21.05:226,21,0
chr10	90466514	.	C	CGTGT	3747.41	PASS	AC=32;AF=0.593;AN=54;BaseQRankSum=2.293;DP=606;FS=1.106;HRun=0;HaplotypeScore=163.6433;InbreedingCoeff=0.8078;MQ=55.85;MQ0=6;MQRankSum=-2.470;QD=11.82;ReadPosRankSum=-0.714;VQSLOD=2.8668;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:9.01:115,9,0	1/1:4,4:8:11.78:232,12,0	0/0:29,0:17:25.18:0,25,285	0/0:27,0:20:7.19:0,7,223	1/1:16,0:19:6.02:105,6,0	0/0:21,0:22:42.12:0,42,643	0/0:16,0:18:53.91:0,54,819	0/0:30,0:32:48.14:0,48,709	1/1:12,0:13:3.48:54,3,0	1/1:35,0:33:48.14:735,48,0	./.	1/1:19,0:24:12.04:205,12,0	1/1:10,0:9:3.90:50,4,0	1/1:13,0:16:9.01:122,9,0	1/1:2,14:18:38.60:831,39,0	1/1:13,0:15:12.04:205,12,0	1/1:7,13:21:29.84:672,30,0	1/1:15,0:17:9.03:139,9,0	0/0:22,0:21:21.04:0,21,297	0/0:31,0:31:63.20:0,63,1011	0/0:33,0:37:65.39:0,65,1121	1/1:17,1:21:2.90:53,3,0	1/1:20,0:18:6.02:102,6,0	1/1:15,0:20:3.01:51,3,0	1/1:17,0:19:6:76,6,0	0/0:26,0:27:51.16:0,51,793	0/0:16,0:16:36.12:0,36,592	0/0:6,0:9:21.05:0,21,281
chr10	90468136	.	C	CGG	1272.38	PASS	AB=0.944;AC=35;AF=0.729;AN=48;BaseQRankSum=-1.623;DP=124;FS=2.778;HRun=3;HaplotypeScore=32.9527;InbreedingCoeff=0.3221;MQ=69.69;MQ0=0;MQRankSum=-1.640;QD=14.80;ReadPosRankSum=-1.298;VQSLOD=0.3508;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:10:0.46:0,0,1	0/0:1,0:1:3.01:0,3,35	0/0:10,0:7:8.24:0,8,94	0/1:4,0:1:19.93:23,0,20	1/1:2,2:9:2.22:7,2,0	1/1:0,5:5:6.02:95,6,0	1/1:4,0:4:11.98:119,12,0	1/1:4,8:16:45.59:626,46,0	1/1:0,2:2:2.99:24,3,0	0/1:1,0:1:0:0,0,0	./.	./.	1/1:0,1:2:3.01:49,3,0	1/1:0,3:4:8.86:108,9,0	0/0:3,0:3:5.93:0,6,52	./.	0/0:7,0:7:18.05:0,18,211	1/1:2,0:2:1.25:3,1,0	./.	1/1:1,1:2:3.01:36,3,0	1/1:1,0:4:0.31:0,0,0	1/1:0,4:5:6.02:83,6,0	1/1:0,4:4:3.01:50,3,0	1/1:4,2:6:3.85:25,4,0	1/1:1,0:1:2.98:21,3,0	0/1:7,0:7:16.58:42,0,17	1/1:0,4:4:3.01:37,3,0	1/1:3,0:3:6:55,6,0
chr10	90468355	.	CACACACACACACACACACACACACATATATATATATAT	C	15760.84	PASS	AB=0.991;AC=36;AF=0.667;AN=54;BaseQRankSum=7.162;DP=400;FS=5.590;HRun=0;HaplotypeScore=257.0202;InbreedingCoeff=0.2738;MQ=41.02;MQ0=18;MQRankSum=-2.805;QD=51.67;ReadPosRankSum=6.263;VQSLOD=2.6679;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:14:15.05:0,15,1295	./.	0/0:14,0:2:3.01:0,3,86	0/0:19,0:5:15.05:0,15,528	1/1:7,0:7:3.01:232,3,0	1/1:26,0:26:12.04:878,12,0	1/1:17,0:17:3.01:235,3,0	0/0:18,0:18:9.97:0,10,256	0/1:15,0:15:5.95:693,0,6	1/1:3,7:10:13.77:398,14,0	1/1:3,1:4:6.02:294,6,0	1/1:33,0:33:16.51:2577,17,0	1/1:6,0:6:2.98:22,3,0	0/1:15,0:15:33.93:354,0,34	0/0:5,0:5:3.01:0,3,88	1/1:11,21:32:22.62:2325,23,0	0/0:23,0:23:17.98:0,18,1460	1/1:4,7:11:9.03:891,9,0	0/1:11,0:11:94:512,0,94	1/1:2,0:2:3.01:39,3,0	1/1:25,0:23:9.24:218,9,0	1/1:8,0:8:6.02:469,6,0	1/1:7,0:7:6.02:249,6,0	0/1:30,0:29:10.74:238,0,11	1/1:4,0:3:3.01:76,3,0	0/1:17,1:18:10.35:2374,0,10	0/1:16,0:16:9.90:1511,0,10	1/1:8,0:7:15.05:1176,15,0
chr10	90468357	.	CACACACACACACACACACACACATATATATATATAT	C	18302.43	PASS	AC=44;AF=0.815;AN=54;BaseQRankSum=3.706;DP=375;FS=5.342;HRun=0;HaplotypeScore=213.1418;InbreedingCoeff=0.6009;MQ=41.86;MQ0=17;MQRankSum=-3.038;QD=61.42;ReadPosRankSum=3.720;VQSLOD=3.6300;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:14:15.05:0,15,1228	./.	0/0:13,0:2:3.01:0,3,79	0/0:18,0:4:12.04:0,12,388	1/1:0,7:7:3.01:280,3,0	1/1:3,23:26:12.04:1069,12,0	1/1:3,10:13:3.01:283,3,0	1/1:16,0:16:12.02:191,12,0	1/1:6,9:15:9.03:849,9,0	1/1:7,0:7:13.77:362,14,0	1/1:1,3:4:6.02:306,6,0	1/1:6,26:32:37.01:3173,37,0	1/1:6,0:6:6.02:118,6,0	1/1:7,10:17:6.02:459,6,0	0/0:5,0:5:3.01:0,3,86	1/1:21,0:21:22.22:2038,22,0	0/0:25,0:25:17.82:0,18,1378	1/1:7,0:7:9.03:783,9,0	1/1:6,6:12:17.63:696,18,0	1/1:2,0:2:3.01:87,3,0	1/1:9,14:22:8.88:266,9,0	1/1:0,8:8:6.02:565,6,0	1/1:1,6:7:6.02:342,6,0	1/1:13,16:28:8.88:298,9,0	1/1:3,0:2:3.01:40,3,0	1/1:4,14:18:39.11:2811,39,0	1/1:3,14:17:21.07:1872,21,0	1/1:1,7:7:15.05:1415,15,0
chr10	90468379	.	CATATATATATATAT	C	9127.60	PASS	AC=40;AF=0.870;AN=46;BaseQRankSum=3.722;DP=299;FS=5.054;HRun=0;HaplotypeScore=153.3267;InbreedingCoeff=0.5349;MQ=45.83;MQ0=3;MQRankSum=-0.447;QD=38.35;ReadPosRankSum=2.665;VQSLOD=4.3401;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:18:12.03:0,12,357	./.	./.	./.	1/1:7,0:7:3.01:105,3,0	1/1:23,0:23:12.04:449,12,0	1/1:10,0:10:3.01:108,3,0	1/1:0,11:11:33.07:1006,33,0	1/1:9,0:9:9.03:324,9,0	1/1:7,0:7:11.95:204,12,0	1/1:4,0:4:6.02:221,6,0	1/1:26,0:26:36.49:1337,36,0	1/1:0,11:11:6.02:242,6,0	1/1:10,0:10:6.02:224,6,0	0/0:5,0:5:3.01:0,3,175	1/1:21,0:21:23.78:885,24,0	0/0:6,0:31:14.98:0,15,621	1/1:7,0:7:9.03:322,9,0	1/1:9,0:9:15.01:490,15,0	./.	1/1:15,0:13:3.01:116,3,0	1/1:8,0:8:6.02:214,6,0	1/1:6,0:6:6.02:222,6,0	1/1:17,0:16:3.01:108,3,0	./.	1/1:15,0:15:36.12:1238,36,0	1/1:14,0:14:21.07:770,21,0	1/1:8,0:7:15.05:539,15,0
chr10	90468757	.	TCATACACA	T	5451.19	PASS	AB=1.000;AC=41;AF=0.759;AN=54;BaseQRankSum=-4.613;DP=419;FS=6.586;HRun=0;HaplotypeScore=150.8944;InbreedingCoeff=0.2058;MQ=33.24;MQ0=22;MQRankSum=-1.379;QD=15.75;ReadPosRankSum=-0.188;VQSLOD=3.6492;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:2.88:0,3,15	0/1:6,0:6:21.40:21,0,148	1/1:4,0:1:2.22:7,2,0	0/0:7,0:1:3.01:0,3,86	1/1:4,4:10:5.09:33,5,0	1/1:13,4:15:1.55:35,2,0	1/1:15,8:20:5.72:119,6,0	1/1:2,20:21:54.18:625,54,0	1/1:10,8:17:11.95:326,12,0	1/1:18,0:20:4.13:453,4,0	1/1:6,0:7:6.45:51,6,0	1/1:4,9:13:18.06:496,18,0	1/1:19,5:22:38.52:671,39,0	1/1:13,4:17:2.35:17,2,0	0/1:27,0:25:99:100,0,242	1/1:19,0:26:15.11:281,15,0	0/1:24,0:21:69.64:70,0,288	1/1:10,0:11:23.89:368,24,0	1/1:11,1:10:13.72:292,14,0	0/0:6,3:8:0.46:0,0,1	./.	1/1:5,5:8:3:25,3,0	0/0:3,10:13:0.27:0,0,1	1/1:11,1:13:4.75:73,5,0	0/0:1,0:7:0:0,0,0	1/1:10,4:13:33.45:615,33,0	1/1:9,8:18:38.02:688,38,0	1/1:2,1:1:3.01:84,3,0
chr10	90468758	.	CA	C	690.95	PASS	AB=0.926;AC=27;AF=0.500;AN=54;BaseQRankSum=5.509;DP=407;FS=1.311;HRun=1;HaplotypeScore=141.0881;InbreedingCoeff=0.0855;MQ=33.29;MQ0=26;MQRankSum=-0.495;QD=2.51;ReadPosRankSum=0.630;VQSLOD=-0.4756;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:21:0.28:1,0,0	0/0:6,0:6:17.23:0,17,185	1/1:5,0:1:3.01:36,3,0	0/0:11,0:2:6.01:0,6,64	1/1:9,0:10:4.62:18,5,0	0/0:13,3:15:4.42:0,4,39	0/1:21,1:19:9.44:9,0,25	0/0:21,0:20:28.35:0,28,264	1/1:16,2:17:13.21:63,13,0	0/1:23,0:20:27.51:28,0,204	1/1:8,0:7:4.19:13,4,0	1/1:10,2:12:17.25:92,17,0	0/1:19,3:19:6.97:129,0,7	0/0:12,3:15:3.42:0,3,21	0/1:26,1:25:18.29:18,0,141	0/1:23,3:26:39.16:40,0,39	0/0:25,0:21:39.20:0,39,327	0/1:9,0:9:18.80:85,0,19	0/1:9,2:9:38.47:53,0,38	0/0:4,2:5:0.47:0,0,1	./.	1/1:10,0:8:2.68:11,3,0	0/0:11,0:11:0.30:0,0,1	1/1:13,0:13:5.46:44,5,0	0/0:6,0:6:0:0,0,0	0/1:13,1:13:52.20:80,0,52	0/1:17,2:18:3.37:106,0,3	1/1:3,0:1:2.90:16,3,0
chr10	90468760	.	T	TACACACACAC	601.93	PASS	AB=1.000;AC=25;AF=0.463;AN=54;BaseQRankSum=-5.332;DP=412;FS=1.130;HRun=0;HaplotypeScore=177.5493;InbreedingCoeff=0.3020;MQ=32.89;MQ0=28;MQRankSum=0.259;QD=2.37;ReadPosRankSum=-0.206;VQSLOD=2.2714;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,11:23:2.67:23,3,0	1/1:6,0:6:11.99:151,12,0	0/1:9,0:1:0:0,0,0	0/1:14,0:2:0.82:1,0,28	0/1:10,0:10:0.22:0,0,0	1/1:14,0:15:1.89:4,2,0	0/0:21,0:19:3.43:0,3,66	1/1:21,0:20:1.24:3,1,0	0/0:16,0:17:4.08:0,4,146	0/1:23,0:20:35.38:35,0,249	0/0:8,0:7:0.47:0,0,1	0/0:10,0:12:17.73:0,18,333	0/0:18,0:18:23.87:0,24,435	1/1:13,0:15:0.40:1,0,0	1/1:24,0:23:12.51:234,13,0	0/1:22,0:25:8.01:8,0,109	1/1:25,0:21:17.89:246,18,0	0/0:9,0:9:4.18:0,4,184	0/0:8,0:8:0.63:0,1,144	1/1:4,0:5:0.47:1,0,0	./.	0/0:10,0:8:0:0,0,0	1/1:11,0:11:0.39:1,0,0	0/0:13,0:13:2.29:0,2,45	0/1:6,0:6:0:0,0,0	0/1:13,0:12:23.70:24,0,240	0/0:15,0:17:17.74:0,18,503	0/0:3,0:1:3.01:0,3,70
chr10	90468857	.	CAG	C	16608.29	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=5.968;DP=528;FS=20.007;HRun=0;HaplotypeScore=84.7205;InbreedingCoeff=0.9926;MQ=88.06;MQ0=2;MQRankSum=-6.011;QD=43.82;ReadPosRankSum=4.045;VQSLOD=4.5206;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,2172	0/0:4,0:4:12.04:0,12,244	0/0:34,0:34:99:0,102,1940	0/0:24,0:24:72.03:0,72,1300	1/1:0,10:10:30.10:473,30,0	1/1:0,24:24:63.22:1025,63,0	1/1:0,20:20:48.16:781,48,0	1/1:0,25:25:75.24:1186,75,0	1/1:0,17:17:41.50:642,42,0	1/1:0,15:15:45.09:700,45,0	1/1:0,12:12:36.12:568,36,0	1/1:0,20:20:57.19:927,57,0	1/1:0,18:18:48.16:781,48,0	1/1:0,20:20:48.16:770,48,0	0/0:27,0:27:78.22:0,78,1512	1/1:0,25:24:66.23:1072,66,0	0/0:20,0:20:60.17:0,60,1144	1/1:0,11:11:33.11:537,33,0	1/1:1,14:15:45.14:707,45,0	1/1:0,11:11:33.11:504,33,0	1/1:0,29:29:72.25:1169,72,0	1/1:0,9:9:24.08:375,24,0	1/1:0,14:14:42.14:683,42,0	1/1:0,25:25:69.24:1123,69,0	1/1:0,10:9:24.08:391,24,0	1/1:0,20:20:54.18:878,54,0	1/1:0,16:16:45.15:732,45,0	1/1:0,13:13:36.12:586,36,0
chr10	90468972	.	C	CA	14959.73	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-11.630;DP=513;FS=1.748;HRun=1;HaplotypeScore=44.6816;InbreedingCoeff=0.9942;MQ=72.24;MQ0=0;MQRankSum=-5.226;QD=40.00;ReadPosRankSum=2.150;VQSLOD=5.2232;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,1251	0/0:8,0:8:24.06:0,24,297	0/0:24,0:24:66.21:0,66,846	0/0:27,0:27:78.25:0,78,1006	1/1:0,10:10:24.08:360,24,0	1/1:0,16:16:42.14:629,42,0	1/1:0,19:19:54.18:809,54,0	1/1:2,39:41:99:1708,117,0	1/1:1,11:12:30.10:449,30,0	1/1:2,9:11:27.09:405,27,0	1/1:1,5:6:15.05:225,15,0	1/1:0,11:11:27.09:404,27,0	1/1:0,16:16:48.16:718,48,0	1/1:1,12:13:30.10:442,30,0	0/0:19,0:19:54.15:0,54,684	1/1:1,12:13:36.12:539,36,0	0/0:25,0:25:75.24:0,75,973	1/1:1,21:22:54.18:809,54,0	1/1:2,18:20:54.18:808,54,0	1/1:1,17:18:48.12:690,48,0	1/1:1,41:42:99:1843,123,0	1/1:0,11:11:27.09:404,27,0	1/1:1,9:10:24.08:360,24,0	1/1:0,26:26:60.20:899,60,0	1/1:1,7:8:24.08:355,24,0	1/1:0,17:17:51.17:760,51,0	1/1:1,10:11:30.10:449,30,0	1/1:1,20:21:60.20:895,60,0
chr10	90470247	.	CCT	C	1519.11	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.271;DP=626;FS=0.000;HRun=0;HaplotypeScore=105.6133;InbreedingCoeff=0.9961;MQ=90.96;MQ0=0;MQRankSum=-4.680;QD=44.68;ReadPosRankSum=1.007;VQSLOD=4.7053;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:99:1614,99,0	0/0:11,0:11:33.11:0,33,670	0/0:19,0:19:57.17:0,57,1037	0/0:31,0:31:84.19:0,84,1481	0/0:15,0:15:45.14:0,45,866	0/0:28,0:28:81.22:0,81,1536	0/0:23,0:23:69.24:0,69,1380	0/0:37,0:37:99:0,111,2150	0/0:26,0:26:78.27:0,78,1564	0/0:18,0:18:54.05:0,54,1052	0/0:9,0:9:27.07:0,27,466	0/0:34,0:34:99:0,102,2073	0/0:22,0:22:66.23:0,66,1340	0/0:22,0:22:66.23:0,66,1301	0/0:34,0:34:99:0,102,2052	0/0:22,0:22:66.23:0,66,1341	0/0:27,0:27:81.27:0,81,1591	0/0:28,0:28:84.23:0,84,1607	0/0:18,0:18:54.17:0,54,1041	0/0:12,0:12:36.12:0,36,710	0/0:30,0:30:90.29:0,90,1770	0/0:17,0:17:48.16:0,48,974	0/0:11,0:11:30.10:0,30,583	0/0:9,0:9:27.08:0,27,512	0/0:22,0:21:66.23:0,66,1341	0/0:31,0:31:93.27:0,93,1791	0/0:27,0:27:81.24:0,81,1525	0/0:9,0:9:27.09:0,27,528
chr10	90471603	.	AT	A	2099.64	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-2.122;DP=552;FS=23.148;HRun=10;HaplotypeScore=75.1449;InbreedingCoeff=0.9323;MQ=74.87;MQ0=2;MQRankSum=-2.061;QD=19.26;ReadPosRankSum=1.894;VQSLOD=2.6925;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,34:38:95.74:833,96,0	1/1:0,9:9:20.95:175,21,0	0/0:22,0:19:41.49:0,41,382	0/0:19,0:18:38.93:0,39,400	0/0:13,0:13:33.09:0,33,365	0/0:17,0:17:48.13:0,48,531	0/0:15,0:15:32.90:0,33,336	0/0:27,0:27:45.71:0,46,700	0/0:25,0:25:69.16:0,69,745	0/0:0,0:16:42.51:0,43,210	0/0:1,0:10:26.48:0,26,145	0/0:21,1:22:31.09:0,31,564	0/0:18,1:20:2.28:0,2,445	0/0:25,0:25:75.19:0,75,820	1/1:3,30:33:77.98:677,78,0	0/0:2,0:20:42.99:0,43,217	1/1:3,26:29:65.97:573,66,0	0/0:2,0:29:65.85:0,66,332	0/0:13,0:13:24.05:0,24,255	0/0:14,0:16:44.85:0,45,441	0/0:24,0:23:63.16:0,63,689	0/0:11,0:11:33.09:0,33,365	0/0:6,0:6:15.04:0,15,166	0/0:17,0:16:45.11:0,45,490	0/0:2,0:10:11.43:0,11,58	0/0:20,0:20:45.04:0,45,481	0/0:28,0:29:68.97:0,69,723	0/0:15,0:16:30.04:0,30,361
chr10	90471956	.	TA	T	1219.82	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-0.878;DP=603;FS=1.827;HRun=8;HaplotypeScore=80.4661;InbreedingCoeff=0.9936;MQ=65.73;MQ0=2;MQRankSum=0.785;QD=22.18;ReadPosRankSum=2.611;VQSLOD=4.1393;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,1667	1/1:0,6:6:18.03:174,18,0	0/0:25,1:21:22.97:0,23,516	0/0:14,1:11:24.41:0,24,265	0/0:31,0:31:90.28:0,90,1087	0/0:18,0:18:51.16:0,51,616	0/0:26,0:26:72.21:0,72,858	0/0:29,0:29:78.23:0,78,926	0/0:24,0:24:66.17:0,66,766	0/0:27,0:27:66.17:0,66,782	0/0:19,0:19:57.14:0,57,673	0/0:24,0:24:72.20:0,72,850	0/0:16,0:16:48.14:0,48,568	0/0:16,0:16:45.14:0,45,544	1/1:0,19:19:54.09:521,54,0	0/0:20,0:20:54.16:0,54,643	1/1:5,25:30:69.11:666,69,0	0/0:36,0:36:99:0,102,1218	0/0:17,0:16:45.12:0,45,531	0/0:14,0:14:39.12:0,39,471	0/0:25,0:25:69.19:0,69,810	0/0:13,0:13:39.11:0,39,461	0/0:9,0:9:27.08:0,27,326	0/0:31,0:31:84.25:0,84,1002	0/0:18,1:19:22.46:0,22,551	0/0:17,0:17:51.16:0,51,616	0/0:19,0:19:54.17:0,54,652	0/0:10,0:10:27.07:0,27,314
chr10	90472453	.	A	AAC	26323.05	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-14.429;DP=716;FS=5.332;HRun=0;HaplotypeScore=73.9258;InbreedingCoeff=0.9978;MQ=82.42;MQ0=2;MQRankSum=-5.169;QD=47.09;ReadPosRankSum=2.666;VQSLOD=6.2812;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:99:0,117,1657	0/0:9,0:9:24.08:0,24,343	0/0:26,0:26:69.23:0,69,969	0/0:16,0:16:39.13:0,39,524	1/1:1,24:28:69.24:1260,69,0	1/1:1,20:22:54.18:971,54,0	1/1:4,24:28:57.20:1045,57,0	1/1:2,25:29:81.22:1340,81,0	1/1:1,30:31:81.28:1484,81,0	1/1:2,29:31:90.31:1643,90,0	1/1:0,10:11:30.10:549,30,0	1/1:1,30:31:72.25:1319,72,0	1/1:0,21:22:63.22:1151,63,0	1/1:3,23:25:66.23:1190,66,0	0/0:37,0:37:99:0,105,1487	1/1:3,40:43:99:2027,111,0	0/0:27,0:27:75.24:0,75,1055	1/1:5,14:19:57.13:953,57,0	1/1:6,20:26:60.21:1100,60,0	1/1:0,18:18:45.15:825,45,0	1/1:2,41:43:99:2089,114,0	1/1:3,24:27:75.26:1344,75,0	1/1:1,18:19:51.17:935,51,0	1/1:1,22:22:63.22:1154,63,0	1/1:1,15:16:42.14:770,42,0	1/1:4,27:31:81.28:1483,81,0	1/1:3,24:29:75.26:1361,75,0	1/1:0,6:6:18.06:330,18,0
chr10	90472578	.	G	GT	28879.90	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.948;DP=758;FS=12.945;HRun=1;HaplotypeScore=78.3842;InbreedingCoeff=1.0000;MQ=73.78;MQ0=1;MQRankSum=-11.030;QD=41.02;ReadPosRankSum=6.882;VQSLOD=3.5814;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:44:99:1888,126,0	1/1:0,14:14:42.14:629,42,0	0/0:30,0:28:81.07:0,81,974	0/0:24,0:24:63.18:0,63,797	1/1:0,17:17:48.08:669,48,0	1/1:0,17:17:48.16:719,48,0	1/1:0,27:27:69.23:1033,69,0	1/1:2,23:25:66.19:930,66,0	1/1:0,22:22:57.19:854,57,0	1/1:0,29:29:87.29:1304,87,0	1/1:1,18:19:54.18:797,54,0	1/1:0,34:34:93.14:1393,93,0	1/1:1,24:25:57.19:854,57,0	1/1:0,24:24:66.22:989,66,0	1/1:2,45:47:99:1844,123,0	1/1:1,38:39:99:1708,114,0	1/1:0,32:32:87.29:1304,87,0	1/1:0,22:22:60.20:899,60,0	1/1:1,24:26:75.25:1113,75,0	1/1:3,23:26:66.22:989,66,0	1/1:2,56:58:99:2383,160,0	1/1:0,23:23:63.21:944,63,0	1/1:1,24:25:72.24:1078,72,0	1/1:1,21:22:63.21:944,63,0	1/1:1,23:24:63.21:944,63,0	1/1:1,24:25:72.23:1056,72,0	1/1:0,21:21:60.20:896,60,0	1/1:1,16:17:48.16:719,48,0
chr10	90472684	.	C	CTT	24488.84	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-14.849;DP=723;FS=1.575;HRun=4;HaplotypeScore=81.7629;InbreedingCoeff=0.9979;MQ=64.68;MQ0=5;MQRankSum=-0.936;QD=46.12;ReadPosRankSum=0.847;VQSLOD=3.7609;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:38:93.32:0,93,408	0/0:8,0:8:24.08:0,24,320	0/0:45,0:22:54.09:0,54,680	0/0:38,0:20:50.28:0,50,574	1/1:0,21:21:60.16:1032,60,0	1/1:1,15:16:39.13:702,39,0	1/1:2,19:21:39.13:702,39,0	1/1:1,33:34:93.27:1595,93,0	1/1:1,19:20:51.17:918,51,0	1/1:5,24:29:84.27:1454,84,0	1/1:2,18:20:54.19:973,54,0	1/1:2,32:34:87.30:1566,87,0	1/1:1,27:28:63.22:1128,63,0	1/1:0,20:20:51.17:919,51,0	0/0:21,0:21:57.17:0,57,746	1/1:2,30:32:90.31:1621,90,0	0/0:41,1:42:63.32:0,63,1446	1/1:0,27:27:72.25:1297,72,0	1/1:1,35:36:99:1737,105,0	1/1:0,24:24:66.23:1189,66,0	1/1:4,39:43:96.33:1729,96,0	1/1:2,19:21:51.17:918,51,0	1/1:1,18:19:54.14:938,54,0	1/1:3,20:23:69.23:1210,69,0	1/1:3,13:16:39.13:702,39,0	1/1:2,16:18:48.16:864,48,0	1/1:2,17:19:57.16:973,57,0	1/1:0,9:9:18.06:324,18,0
chr10	90473381	.	AT	A	10193.66	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=8.694;DP=578;FS=4.315;HRun=9;HaplotypeScore=71.1336;InbreedingCoeff=0.9976;MQ=67.93;MQ0=0;MQRankSum=-3.506;QD=22.26;ReadPosRankSum=1.773;VQSLOD=5.8787;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.17:0,66,741	0/0:9,0:9:27.08:0,27,311	0/0:15,1:15:20.88:0,21,318	0/0:16,0:14:25.04:0,25,237	1/1:1,21:22:62.86:555,63,0	1/1:3,18:21:51.02:467,51,0	1/1:0,11:11:30.02:275,30,0	1/1:6,21:27:63.03:576,63,0	1/1:2,12:14:24.01:220,24,0	1/1:2,21:24:65.06:582,65,0	1/1:0,16:16:48.03:438,48,0	1/1:1,23:24:60.03:549,60,0	1/1:0,13:13:24.01:220,24,0	1/1:4,14:18:39.01:357,39,0	0/0:25,0:25:72.21:0,72,831	1/1:5,19:24:60.02:545,60,0	0/0:28,0:28:78.23:0,78,899	1/1:6,15:21:45.01:411,45,0	1/1:3,23:26:68.98:620,69,0	1/1:2,17:19:48.01:439,48,0	1/1:3,20:23:48.02:439,48,0	1/1:0,22:22:62.25:556,62,0	1/1:3,18:21:51.02:467,51,0	1/1:2,17:19:50.97:457,51,0	1/1:5,21:26:63.02:576,63,0	1/1:2,21:23:59.97:540,60,0	1/1:3,24:27:66.03:604,66,0	1/1:5,12:17:33.01:302,33,0
chr10	90473409	.	A	AT	3718.13	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=2.096;DP=585;FS=6.481;HRun=6;HaplotypeScore=89.9313;InbreedingCoeff=0.9930;MQ=66.66;MQ0=0;MQRankSum=-8.869;QD=33.50;ReadPosRankSum=-0.256;VQSLOD=2.9522;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.09:0,42,428	0/0:12,0:12:36.08:0,36,367	0/0:18,0:18:37.15:0,37,348	0/0:10,0:9:12.63:0,13,145	0/0:24,0:24:66.12:0,66,664	0/0:21,0:21:57.12:0,57,579	0/0:18,0:18:48.09:0,48,483	0/0:31,0:31:75.11:0,75,740	0/0:17,0:17:36.08:0,36,366	1/1:4,28:32:84.23:1033,84,0	1/1:1,19:20:54.16:652,54,0	0/0:25,0:25:69.16:0,69,704	0/0:15,0:15:36.08:0,36,367	0/0:12,0:12:30.01:0,30,291	0/0:33,0:33:90.16:0,90,907	1/1:3,19:22:63.18:767,63,0	0/0:30,0:30:84.16:0,84,847	1/1:4,14:18:47.32:550,47,0	0/0:20,0:20:57.12:0,57,575	0/0:25,0:25:65.95:0,66,668	0/0:20,0:20:42.06:0,42,416	0/0:26,0:26:63.13:0,63,640	0/0:25,0:25:75.15:0,75,757	0/0:16,0:16:45.07:0,45,444	1/1:1,18:19:57.18:716,57,0	0/0:26,0:26:75.15:0,75,755	0/0:25,0:25:69.15:0,69,703	0/0:10,0:10:24:0,24,227
chr10	90473549	.	AAG	A	11740.36	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=14.316;DP=637;FS=9.916;HRun=0;HaplotypeScore=79.2200;InbreedingCoeff=0.9986;MQ=86.17;MQ0=3;MQRankSum=-0.479;QD=35.58;ReadPosRankSum=2.884;VQSLOD=6.6545;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.26:0,81,1451	0/0:14,0:14:39.11:0,39,682	0/0:25,0:25:71.87:0,72,1170	0/0:21,0:20:51.10:0,51,851	1/1:2,26:28:72.19:1007,72,0	1/1:0,20:20:54.18:774,54,0	1/1:0,11:11:27.09:387,27,0	1/1:1,24:25:72.18:930,72,0	1/1:1,13:14:36.12:516,36,0	0/0:34,0:34:96.32:0,96,1723	0/0:28,0:28:78.27:0,78,1399	1/1:2,20:22:45.13:625,45,0	1/1:1,15:16:33.11:472,33,0	1/1:1,13:14:39.13:558,39,0	0/0:30,0:30:90.27:0,90,1611	0/0:37,0:37:99:0,108,1937	0/0:26,0:25:75.26:0,75,1364	0/0:30,0:30:90.31:0,90,1649	1/1:4,17:21:51.17:731,51,0	1/1:3,20:21:48.16:673,48,0	1/1:0,15:15:36.12:516,36,0	1/1:1,15:16:42.14:602,42,0	1/1:0,17:17:48.11:663,48,0	1/1:1,20:21:60.20:860,60,0	0/0:34,0:34:99:0,102,1780	1/1:1,33:33:93.30:1312,93,0	1/1:2,21:23:60.20:858,60,0	1/1:0,10:10:18.06:258,18,0
chr10	90473912	.	CA	C	1114.27	PASS	AB=0.941;AC=10;AF=0.179;AN=56;BaseQRankSum=-9.554;DP=452;FS=2.444;HRun=11;HaplotypeScore=147.8001;InbreedingCoeff=0.5344;MQ=71.40;MQ0=0;MQRankSum=6.032;QD=8.84;ReadPosRankSum=3.119;VQSLOD=1.5970;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:0,0:30:54.11:0,54,272	1/1:0,8:8:23.97:197,24,0	0/0:11,0:11:13.33:0,13,92	0/1:14,0:13:11.47:11,0,44	0/1:10,0:10:0.46:0,0,183	0/0:14,0:14:33:0,33,315	0/0:19,0:19:38.69:0,39,369	0/0:22,2:25:32.28:0,32,510	0/0:14,0:14:27.07:0,27,286	0/0:8,0:9:20.84:0,21,192	0/0:15,0:15:20.90:0,21,183	0/0:17,2:18:8.46:0,8,295	0/0:10,0:10:21:0,21,205	0/0:13,1:14:11.30:0,11,309	1/1:3,23:28:61.96:499,62,0	0/0:16,0:17:35.39:0,35,353	1/1:5,22:31:71.03:541,71,0	0/0:25,0:25:60.14:0,60,632	0/0:13,0:13:24.03:0,24,244	0/0:9,0:9:20.90:0,21,176	0/0:10,0:11:20.85:0,21,195	0/0:17,0:18:41.89:0,42,410	0/1:5,2:8:12.85:13,0,42	0/0:16,0:16:30.07:0,30,318	0/0:19,0:19:35.98:0,36,339	0/1:25,1:27:7.27:7,0,301	0/0:15,0:15:33.08:0,33,351	0/0:2,0:2:6:0,6,55
chr10	90473946	.	TCGAGTTGGTAG	T	23228.55	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=12.915;DP=403;FS=6.579;HRun=0;HaplotypeScore=162.3443;InbreedingCoeff=0.9431;MQ=75.07;MQ0=0;MQRankSum=-14.556;QD=89.00;ReadPosRankSum=3.091;VQSLOD=4.6337;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:87.30:0,87,4769	0/0:6,0:6:18.06:0,18,1046	0/0:17,0:17:32.52:0,33,2464	0/0:13,0:13:35.48:0,35,1681	1/1:0,5:5:9.03:281,9,0	1/1:0,8:8:18.06:670,18,0	1/1:0,20:20:48.16:1762,48,0	1/1:0,20:20:60.18:2000,60,0	1/1:0,15:15:42.14:1564,42,0	1/1:0,11:11:27.09:1006,27,0	1/1:0,8:8:18.06:643,18,0	1/1:0,17:16:48.16:1701,48,0	1/1:1,10:11:30.10:1108,30,0	1/1:0,12:12:36.12:1313,36,0	0/0:34,0:34:99:0,99,5633	1/1:0,11:11:24.08:894,24,0	0/0:38,0:38:99:0,108,6027	1/1:0,10:10:24.08:793,24,0	1/1:0,12:12:33.11:1225,33,0	1/1:0,7:7:15.05:526,15,0	1/1:0,12:12:21.07:686,21,0	1/1:0,12:12:27.09:995,27,0	1/1:0,7:7:21.07:755,21,0	1/1:0,17:17:33.11:1228,33,0	1/1:0,14:14:27.09:914,27,0	1/1:1,16:17:51.17:1777,51,0	1/1:0,14:14:36.12:1341,36,0	1/1:1,0:1:3.01:46,3,0
chr10	90474186	.	A	ATTT	32051.70	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.315;DP=655;FS=1.297;HRun=2;HaplotypeScore=91.2130;InbreedingCoeff=0.9942;MQ=82.97;MQ0=0;MQRankSum=-10.728;QD=52.72;ReadPosRankSum=6.330;VQSLOD=5.0529;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:35:90.18:1927,90,0	1/1:0,8:8:24.08:552,24,0	0/0:29,0:29:71.38:0,71,1189	0/0:18,0:18:50.78:0,51,666	1/1:2,14:16:32.93:562,33,0	1/1:2,20:23:39.13:872,39,0	1/1:2,21:23:66.23:1515,66,0	1/1:8,24:32:81.18:1557,81,0	1/1:0,27:27:69.24:1591,69,0	1/1:1,14:15:45.15:1009,45,0	1/1:1,10:11:30.02:592,30,0	1/1:2,34:35:96.33:2210,96,0	1/1:1,21:22:42.14:940,42,0	1/1:2,16:18:48.12:1057,48,0	1/1:4,47:51:99:2391,108,0	1/1:2,30:32:78.27:1770,78,0	1/1:2,35:37:92.92:2142,93,0	1/1:5,7:12:21.07:481,21,0	1/1:3,22:24:72.22:1570,72,0	1/1:1,21:22:57.15:1234,57,0	1/1:5,27:33:72.16:1554,72,0	1/1:1,16:17:48.12:1057,48,0	1/1:1,11:13:24.04:502,24,0	1/1:2,26:28:63.27:1303,63,0	1/1:1,15:16:36.12:830,36,0	1/1:1,22:24:66.20:1432,66,0	1/1:1,18:19:39.09:850,39,0	1/1:0,12:12:24.08:553,24,0
chr10	90474417	.	TAAAAAAA	T	13864.41	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=8.886;DP=507;FS=7.206;HRun=16;HaplotypeScore=136.3746;InbreedingCoeff=0.9357;MQ=50.77;MQ0=1;MQRankSum=-11.852;QD=37.57;ReadPosRankSum=7.510;VQSLOD=2.6151;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:34:99:0,99,3129	0/0:10,0:12:31.38:0,31,1084	0/0:29,0:19:36.59:0,37,864	0/0:9,0:9:11.99:0,12,200	1/1:4,16:20:26.72:501,27,0	1/1:3,10:13:30.06:613,30,0	1/1:6,11:17:32.88:674,33,0	1/1:3,20:23:57.08:1100,57,0	1/1:7,18:25:51.05:1041,51,0	1/1:4,24:28:69.03:1333,69,0	1/1:4,9:13:14.77:306,15,0	1/1:6,18:24:42.05:858,42,0	1/1:2,8:10:21.01:429,21,0	1/1:3,11:14:33:674,33,0	0/0:29,0:31:78.27:0,78,2556	1/1:5,24:29:66.07:1349,66,0	0/0:17,0:21:60.21:0,60,2005	1/1:4,9:13:11.40:244,11,0	1/1:3,6:9:17.99:356,18,0	1/1:2,11:13:17.88:368,18,0	1/1:6,10:17:11.45:183,11,0	1/1:0,15:15:23.67:490,24,0	1/1:3,20:24:44.85:899,45,0	1/1:3,8:11:5.19:178,5,0	1/1:0,13:13:29.93:613,30,0	1/1:4,12:16:36.04:736,36,0	1/1:3,11:14:36.06:734,36,0	1/1:3,5:8:8.87:184,9,0
chr10	90474662	.	GA	G	5248.30	PASS	AB=0.952;AC=35;AF=0.625;AN=56;BaseQRankSum=-2.202;DP=505;FS=1.312;HRun=10;HaplotypeScore=89.4134;InbreedingCoeff=0.9206;MQ=71.02;MQ0=4;MQRankSum=1.391;QD=17.55;ReadPosRankSum=0.447;VQSLOD=5.2253;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:27:48.97:0,49,262	0/0:7,0:7:18.04:0,18,191	0/0:26,0:16:9.71:0,10,88	0/1:19,0:15:0.44:0,0,18	1/1:5,10:15:32.95:278,33,0	1/1:0,13:13:26.99:234,27,0	1/1:8,5:12:23.98:208,24,0	1/1:12,12:24:47.96:411,48,0	1/1:7,13:20:44.96:386,45,0	0/0:14,0:21:22.45:0,22,132	0/0:7,0:15:27.66:0,28,202	1/1:7,14:21:50.95:439,51,0	1/1:3,10:13:35.96:306,36,0	1/1:8,8:16:12.06:253,12,0	0/0:19,0:19:39.07:0,39,405	0/0:16,0:32:73.73:0,74,405	0/0:22,2:24:4.91:0,5,493	0/0:10,0:21:52:0,52,337	1/1:7,10:17:44.94:380,45,0	1/1:2,17:19:44.97:390,45,0	1/1:5,3:8:11.99:104,12,0	1/1:5,12:17:41.97:361,42,0	1/1:7,10:17:26.96:234,27,0	1/1:6,6:12:17.99:156,18,0	0/0:7,0:12:26:0,26,159	1/1:11,12:23:28.20:413,28,0	1/1:13,12:25:62.96:539,63,0	1/1:2,4:6:17.99:154,18,0
chr10	90474711	.	CT	C	6769.22	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=4.921;DP=454;FS=7.061;HRun=11;HaplotypeScore=74.0662;InbreedingCoeff=0.8743;MQ=61.70;MQ0=0;MQRankSum=0.561;QD=18.10;ReadPosRankSum=0.946;VQSLOD=5.8369;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:54.10:0,54,552	0/0:4,0:4:12.03:0,12,128	0/0:6,0:5:3:0,3,29	0/0:6,0:5:6.86:0,7,48	1/1:4,23:28:33:466,33,0	1/1:3,7:10:26.91:215,27,0	1/1:2,8:11:17:129,17,0	1/1:5,18:25:58:455,58,0	1/1:4,16:20:41.93:344,42,0	1/1:1,14:15:41.95:345,42,0	1/1:4,11:15:0.96:214,1,0	1/1:2,11:13:23.93:197,24,0	1/1:5,7:13:22.99:178,23,0	1/1:0,9:9:26.97:222,27,0	0/0:15,0:16:38.95:0,39,385	1/1:4,21:26:64.95:523,65,0	0/0:23,0:23:63.15:0,63,665	1/1:10,18:28:62.82:510,63,0	1/1:4,14:19:43.97:350,44,0	1/1:4,22:26:65.89:538,66,0	1/1:1,6:7:17.98:148,18,0	1/1:2,5:7:11.96:98,12,0	1/1:5,19:25:23.98:392,24,0	1/1:2,6:8:11.49:98,11,0	1/1:1,15:16:38.94:320,39,0	1/1:4,16:20:48.40:392,48,0	1/1:2,18:20:50.74:413,51,0	1/1:4,9:13:26.96:222,27,0
chr10	90474871	.	G	GAA	11238.77	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-2.756;DP=548;FS=7.745;HRun=9;HaplotypeScore=66.7226;InbreedingCoeff=0.9072;MQ=61.47;MQ0=8;MQRankSum=-2.333;QD=26.14;ReadPosRankSum=-2.031;VQSLOD=3.8752;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:77.49:0,77,1029	0/0:9,0:9:27.07:0,27,287	0/0:13,0:5:2.12:0,2,86	0/0:7,0:7:18.02:0,18,187	1/1:8,19:31:71.08:909,71,0	1/1:0,11:14:39.12:565,39,0	1/1:0,9:10:27.09:398,27,0	1/1:9,22:31:63.16:901,63,0	1/1:1,20:21:60.20:924,60,0	1/1:3,0:15:1.02:71,1,0	1/1:0,0:15:32.79:122,33,0	1/1:2,9:12:21.03:297,21,0	1/1:2,17:20:47.65:701,48,0	1/1:1,9:13:26.57:361,27,0	0/0:18,0:18:51.12:0,51,542	1/1:4,0:23:18.49:131,18,0	0/0:32,0:32:84.17:0,84,883	1/1:5,0:29:57.27:197,57,0	1/1:9,16:27:54.13:740,54,0	1/1:5,15:20:48.05:691,48,0	1/1:1,10:12:21.07:307,21,0	1/1:8,10:19:29.54:397,30,0	1/1:2,16:19:47.13:664,47,0	1/1:0,20:22:53.67:794,54,0	1/1:3,0:18:37.15:126,37,0	1/1:2,20:24:65.68:937,66,0	1/1:7,12:19:48.12:674,48,0	1/1:0,11:12:23.57:332,24,0
chr10	90475196	.	G	GC	21046.38	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.361;DP=616;FS=0.000;HRun=2;HaplotypeScore=54.1637;InbreedingCoeff=0.9935;MQ=82.40;MQ0=0;MQRankSum=-9.204;QD=36.22;ReadPosRankSum=5.773;VQSLOD=4.7758;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,38:42:99:1423,99,0	1/1:2,5:7:18.06:248,18,0	0/0:19,0:19:53.93:0,54,555	0/0:16,0:16:32.25:0,32,428	1/1:1,24:25:75.14:1014,75,0	1/1:0,14:14:39.13:561,39,0	1/1:1,17:18:45.15:648,45,0	1/1:1,17:18:48.11:650,48,0	1/1:1,19:20:51.17:733,51,0	1/1:0,16:16:45.15:648,45,0	1/1:2,17:19:51.17:726,51,0	1/1:0,21:21:48.16:685,48,0	1/1:4,17:21:45.15:647,45,0	1/1:0,22:22:54.18:776,54,0	1/1:1,37:38:96.32:1381,96,0	1/1:1,28:29:84.28:1208,84,0	1/1:1,36:37:99:1424,99,0	1/1:0,20:20:54.18:777,54,0	1/1:3,16:19:51.14:693,51,0	1/1:2,17:19:45.15:646,45,0	1/1:1,31:32:72.24:1036,72,0	1/1:0,18:18:54.18:770,54,0	1/1:1,20:21:54.18:776,54,0	1/1:3,18:21:43.70:602,44,0	1/1:0,19:19:51.17:734,51,0	1/1:5,26:31:81.23:1121,81,0	1/1:3,23:25:57.66:818,58,0	1/1:0,8:8:21.07:302,21,0
chr10	90476043	.	TAA	T	1046.63	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=6.726;DP=424;FS=8.442;HRun=14;HaplotypeScore=68.5259;InbreedingCoeff=0.7187;MQ=59.02;MQ0=0;MQRankSum=7.580;QD=8.58;ReadPosRankSum=5.617;VQSLOD=0.7610;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:38:53.14:197,53,0	1/1:1,11:12:33.03:305,33,0	0/1:13,0:7:8:8,0,16	0/0:13,0:11:15.49:0,15,119	0/0:24,0:23:41.54:0,42,388	0/0:20,0:20:52.70:0,53,622	0/0:15,0:14:33.07:0,33,384	0/0:17,0:16:30.05:0,30,361	0/0:19,0:18:40.06:0,40,417	0/0:15,0:14:18.43:0,18,163	0/1:10,0:10:1.86:2,0,25	0/0:19,0:18:38.93:0,39,390	0/0:7,0:7:12.04:0,12,151	0/0:9,0:9:14.99:0,15,162	1/1:10,11:22:26.76:296,27,0	0/0:10,0:13:20.88:0,21,166	1/1:8,18:27:44.08:400,44,0	0/0:6,0:6:8.68:0,9,53	0/0:16,0:16:28.86:0,29,334	0/0:18,0:17:39.03:0,39,447	0/0:8,0:8:1.25:0,1,3	0/0:11,0:11:22.78:0,23,222	0/0:16,0:15:35.30:0,35,379	0/0:11,0:10:9.92:0,10,91	0/0:12,0:12:5.45:0,5,29	0/0:13,0:13:30.04:0,30,347	0/0:16,0:15:31.59:0,32,304	0/0:4,0:4:9:0,9,89
chr10	90476045	.	A	AAAAAAAAAAAAG	21718.32	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=-2.389;DP=441;FS=1.636;HRun=0;HaplotypeScore=200.3459;InbreedingCoeff=0.7330;MQ=59.98;MQ0=0;MQRankSum=-10.282;QD=70.51;ReadPosRankSum=-2.945;VQSLOD=3.9278;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:57.53:0,58,1580	0/0:14,0:14:16.08:0,16,655	0/0:14,0:8:5.99:0,6,51	0/0:14,0:12:19.32:0,19,135	1/1:22,0:21:46.26:1024,46,0	1/1:19,0:19:24.67:1655,25,0	1/1:15,0:14:36.08:1245,36,0	1/1:17,0:16:30.03:1134,30,0	1/1:19,0:18:36.74:1460,37,0	1/1:13,3:16:31.59:1253,32,0	1/1:10,4:14:33.09:1203,33,0	1/1:18,0:17:39.10:1190,39,0	0/1:6,0:6:6.52:532,0,7	1/1:9,0:9:18.03:630,18,0	0/0:25,0:25:13.24:0,13,719	1/1:17,1:18:45.15:2168,45,0	0/0:27,0:27:35.35:0,35,1095	1/1:9,0:9:18.01:667,18,0	1/1:15,0:15:9.45:930,9,0	1/1:18,0:17:14.51:1307,15,0	1/1:6,0:6:5.99:141,6,0	0/1:11,0:11:11.28:514,0,11	1/1:16,0:15:33.75:1031,34,0	1/1:11,0:10:13.34:244,13,0	1/1:15,0:15:33.09:1388,33,0	1/1:14,0:14:5.89:1121,6,0	1/1:15,0:14:11.27:757,11,0	1/1:4,0:4:8.89:126,9,0
chr10	90476402	.	TAAA	T	6855.91	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=0.359;DP=473;FS=12.996;HRun=15;HaplotypeScore=102.6249;InbreedingCoeff=0.9594;MQ=54.90;MQ0=6;MQRankSum=-4.153;QD=19.81;ReadPosRankSum=2.956;VQSLOD=2.5141;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:29:32:0,32,730	0/0:4,0:10:15.05:0,15,226	0/0:14,0:7:12.01:0,12,131	0/0:11,0:10:14.88:0,15,173	1/1:4,17:21:43.30:489,43,0	1/1:3,16:19:39.06:437,39,0	1/1:3,10:14:29.97:316,30,0	1/1:6,11:17:32.98:340,33,0	1/1:1,13:14:33.01:370,33,0	1/1:3,0:19:40.69:236,41,0	1/1:2,1:17:38.23:246,38,0	1/1:5,17:21:41.97:457,42,0	1/1:4,19:25:50.95:539,51,0	1/1:4,5:9:14.94:168,15,0	0/0:10,0:27:45.14:0,45,658	1/1:3,0:27:55.81:336,56,0	0/0:11,0:32:60.67:0,61,885	1/1:3,0:8:14.69:88,15,0	1/1:6,3:10:11.84:118,12,0	1/1:1,13:16:36.07:404,36,0	1/1:3,14:17:24.02:268,24,0	1/1:3,10:13:30.02:336,30,0	1/1:2,6:8:18:202,18,0	1/1:0,11:13:29.69:320,30,0	1/1:4,0:16:29.36:177,29,0	1/1:2,10:12:27.01:303,27,0	1/1:2,21:23:53.94:605,54,0	1/1:1,3:4:9:101,9,0
chr10	90476641	.	TTA	T	2426.48	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-1.565;DP=565;FS=1.117;HRun=0;HaplotypeScore=103.0767;InbreedingCoeff=0.9817;MQ=60.26;MQ0=3;MQRankSum=2.537;QD=36.76;ReadPosRankSum=4.307;VQSLOD=5.9536;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:74.30:0,74,410	1/1:0,10:9:27.09:437,27,0	0/0:14,0:7:21.01:0,21,287	0/0:13,0:10:20.78:0,21,325	0/0:21,0:21:51.05:0,51,848	0/0:28,0:28:75.24:0,75,1451	0/0:6,0:5:15.05:0,15,304	0/0:42,0:42:99:0,123,2314	0/0:19,0:19:48.10:0,48,917	0/0:27,0:27:81.22:0,81,1408	0/0:25,0:25:69.10:0,69,1184	0/0:20,0:20:58.43:0,58,1098	0/0:26,0:26:69.21:0,69,1296	0/0:19,0:18:50.98:0,51,955	1/1:0,32:32:75.26:1213,75,0	0/0:21,0:21:60.14:0,60,1107	1/1:0,24:24:57.19:919,57,0	0/0:23,0:23:66.07:0,66,1248	0/0:31,0:30:90.24:0,90,1613	0/0:23,0:23:60.16:0,60,1133	0/0:5,0:5:15.02:0,15,230	0/0:6,0:6:17.99:0,18,319	0/0:10,0:10:24.03:0,24,411	0/0:14,0:14:39.08:0,39,602	0/0:18,0:18:48.12:0,48,806	0/0:23,0:22:66.22:0,66,1256	0/0:23,0:23:69.07:0,69,1173	0/0:12,0:12:30.10:0,30,606
chr10	90476642	.	TA	T	1162.19	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-0.577;DP=557;FS=5.794;HRun=9;HaplotypeScore=96.3238;InbreedingCoeff=0.9620;MQ=60.33;MQ0=3;MQRankSum=3.091;QD=12.23;ReadPosRankSum=3.551;VQSLOD=3.2872;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:72.03:658,72,0	1/1:10,0:9:25.18:113,25,0	0/0:15,0:7:12.49:0,12,124	0/0:13,0:10:15.41:0,15,165	0/0:21,0:21:36.10:0,36,411	0/0:27,0:27:72.21:0,72,828	0/0:6,0:5:15.04:0,15,173	0/0:42,0:42:98.50:0,99,1248	0/0:19,0:19:45.12:0,45,509	0/0:26,0:26:66.18:0,66,746	0/0:24,0:24:57.15:0,57,643	0/0:19,0:19:51.15:0,51,586	0/0:24,1:25:63.17:0,63,716	0/0:19,0:18:45.13:0,45,517	1/1:32,0:32:69.84:314,70,0	0/0:21,0:21:54.15:0,54,614	1/1:24,0:24:52.68:237,53,0	0/0:23,0:23:60.18:0,60,691	0/0:30,0:30:84.04:0,84,919	0/0:23,0:23:57.14:0,57,643	0/0:4,0:4:9.03:0,9,104	0/0:6,0:6:15.04:0,15,172	0/0:8,0:9:21.05:0,21,232	0/0:14,0:14:27.05:0,27,291	0/0:18,0:18:36.09:0,36,402	0/0:23,0:22:66.17:0,66,737	0/0:22,0:22:54.12:0,54,605	0/0:12,0:12:30.09:0,30,346
chr10	90476666	.	AAAC	A	13637.16	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-4.470;DP=576;FS=3.718;HRun=0;HaplotypeScore=97.7855;InbreedingCoeff=0.9743;MQ=65.33;MQ0=1;MQRankSum=-2.582;QD=31.28;ReadPosRankSum=1.706;VQSLOD=5.0610;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:34:84.29:0,84,1718	0/0:9,0:8:24.08:0,24,499	0/0:15,0:15:39.12:0,39,689	0/0:23,0:22:48.12:0,48,881	1/1:1,17:18:33.04:442,33,0	1/1:4,24:28:60.20:874,60,0	1/1:2,6:7:6.02:89,6,0	1/1:18,28:46:81.19:1093,81,0	1/1:3,16:19:39.12:552,39,0	1/1:3,22:25:66.22:969,66,0	1/1:3,23:26:54.14:767,54,0	1/1:2,18:20:51.17:739,51,0	1/1:4,19:23:54.18:793,54,0	1/1:2,14:16:42.14:598,42,0	0/0:31,0:31:74.79:0,75,1499	1/1:3,15:18:39.13:563,39,0	0/0:27,0:27:60.14:0,60,1183	1/1:4,22:26:57.19:846,57,0	1/1:9,22:30:66.22:968,66,0	1/1:2,21:23:54.18:771,54,0	1/1:0,9:9:18.06:267,18,0	1/1:0,7:7:18.06:259,18,0	1/1:4,9:13:24.08:347,24,0	1/1:2,9:11:24.08:356,24,0	1/1:3,11:14:27.09:394,27,0	1/1:2,16:18:45.14:650,45,0	1/1:2,20:22:54.18:775,54,0	1/1:1,14:15:36.12:526,36,0
chr10	90476839	.	CT	C	1806.38	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.304;DP=524;FS=1.606;HRun=7;HaplotypeScore=65.5626;InbreedingCoeff=0.9187;MQ=60.69;MQ0=1;MQRankSum=0.166;QD=21.76;ReadPosRankSum=-0.751;VQSLOD=2.9342;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,1241	0/0:13,0:13:39.08:0,39,461	0/0:9,0:6:2.98:0,3,22	0/0:7,0:4:2.97:0,3,20	0/0:19,0:19:42.03:0,42,470	0/0:21,0:21:60.16:0,60,727	0/0:16,0:16:42.12:0,42,516	0/0:32,0:32:90.24:0,90,1064	0/0:16,0:16:36.09:0,36,426	1/1:1,13:14:39.05:383,39,0	1/1:0,17:17:44.94:415,45,0	0/0:22,0:22:60.11:0,60,686	0/0:22,0:22:63.18:0,63,766	0/0:15,0:15:39.11:0,39,477	0/0:31,0:31:90.23:0,90,1069	1/1:0,17:17:39.05:387,39,0	0/0:29,0:29:84.24:0,84,1029	1/1:1,16:17:45.10:459,45,0	0/0:27,0:26:54.16:0,54,667	0/0:20,0:20:54.15:0,54,651	0/0:16,0:16:39.05:0,39,459	0/0:6,0:6:15.05:0,15,189	0/0:9,0:9:24.06:0,24,288	0/0:11,0:11:27.08:0,27,326	1/1:3,15:18:33.07:337,33,0	0/0:23,0:23:69.21:0,69,845	0/0:19,0:19:51.15:0,51,629	0/0:21,0:21:45.14:0,45,565
chr10	90477383	.	T	TG	8715.43	PASS	AB=0.905;AC=35;AF=0.625;AN=56;BaseQRankSum=16.470;DP=470;FS=14.120;HRun=0;HaplotypeScore=121.9688;InbreedingCoeff=0.9130;MQ=72.54;MQ0=0;MQRankSum=-7.599;QD=33.78;ReadPosRankSum=3.256;VQSLOD=3.3455;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1637	0/0:11,0:11:33.11:0,33,461	0/0:13,0:13:39.12:0,39,518	0/0:15,0:15:35.34:0,35,528	1/1:0,8:8:12.04:168,12,0	1/1:0,14:13:39.13:567,39,0	1/1:3,16:19:51.09:702,51,0	1/1:0,6:6:18.02:220,18,0	1/1:0,19:19:51.17:742,51,0	0/0:22,0:22:65.89:0,66,892	0/0:10,0:10:27.09:0,27,362	1/1:0,26:26:78.17:1097,78,0	1/1:0,14:14:33.11:479,33,0	1/1:0,17:17:45.14:643,45,0	0/0:29,0:29:87.21:0,87,1176	0/0:27,0:27:81.20:0,81,1090	0/0:31,0:31:81.23:0,81,1107	0/1:17,2:19:38.04:38,0,540	1/1:0,8:8:21.04:282,21,0	1/1:0,6:6:18.06:265,18,0	1/1:2,22:24:50.61:710,51,0	1/1:1,12:15:26.38:553,26,0	1/1:0,8:8:23.99:318,24,0	1/1:0,16:16:30.42:386,30,0	0/0:12,0:12:36.11:0,36,486	1/1:2,17:19:15.22:701,15,0	1/1:0,7:7:21.07:306,21,0	1/1:0,13:13:39.08:539,39,0
chr10	90477453	.	C	CTTTT	8607.10	PASS	AB=0.683;AC=51;AF=0.911;AN=56;BaseQRankSum=0.784;DP=495;FS=28.862;HRun=17;HaplotypeScore=172.3995;InbreedingCoeff=0.5934;MQ=52.19;MQ0=7;MQRankSum=-3.703;QD=18.79;ReadPosRankSum=-3.432;VQSLOD=0.0118;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,11:40:8.29:238,0,8	1/1:11,0:16:16.55:271,17,0	0/0:25,0:15:12.19:0,12,89	0/0:12,0:11:1.86:0,2,7	1/1:17,3:21:24.81:372,25,0	1/1:8,0:11:28.67:297,29,0	1/1:10,1:13:15.12:145,15,0	1/1:15,0:15:22.22:242,22,0	1/1:21,0:19:30.02:409,30,0	1/1:22,0:22:36.82:519,37,0	1/1:15,0:14:23.94:340,24,0	1/1:18,0:18:21.09:309,21,0	1/1:13,0:12:18:240,18,0	1/1:12,0:12:29.96:339,30,0	1/1:24,0:24:47.37:711,47,0	1/1:25,0:23:42.01:649,42,0	1/1:14,0:22:28.40:410,28,0	1/1:12,0:10:5.98:79,6,0	1/1:16,0:16:16.81:182,17,0	1/1:10,0:10:17.23:188,17,0	1/1:14,1:16:19.17:203,19,0	1/1:15,1:21:39.02:503,39,0	1/1:7,1:9:15.05:190,15,0	1/1:6,0:8:11.56:156,12,0	1/1:20,0:20:36.04:474,36,0	1/1:21,0:23:44.93:531,45,0	1/1:14,0:16:32.90:397,33,0	1/1:8,1:9:13.86:212,14,0
chr10	90477504	.	G	GGGCACGT	17537.84	PASS	AC=42;AF=0.778;AN=54;BaseQRankSum=-0.995;DP=310;FS=15.616;HRun=0;HaplotypeScore=93.8625;InbreedingCoeff=0.8789;MQ=60.35;MQ0=6;MQRankSum=-8.979;QD=85.14;ReadPosRankSum=-0.042;VQSLOD=4.4666;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:39.12:0,39,971	0/0:8,0:8:24.08:0,24,647	0/0:16,0:12:33.11:0,33,802	0/0:21,0:17:48.16:0,48,1234	1/1:3,7:8:15.05:588,15,0	1/1:6,7:12:30.10:1152,30,0	1/1:4,2:7:12:355,12,0	1/1:2,3:4:6.02:245,6,0	1/1:3,6:9:24.08:954,24,0	1/1:2,9:12:36.12:1410,36,0	1/1:3,10:12:30.10:1209,30,0	1/1:3,8:11:27.09:1082,27,0	1/1:1,5:5:12.04:488,12,0	1/1:4,10:14:39.13:1543,39,0	0/0:15,0:15:45.15:0,45,1213	1/1:6,11:17:42.11:1530,42,0	0/0:19,0:18:48.16:0,48,1272	1/1:3,5:9:15.05:548,15,0	1/1:7,6:13:30.10:1097,30,0	1/1:1,1:2:3.01:122,3,0	1/1:2,10:11:17.61:607,18,0	1/1:3,5:8:18.06:671,18,0	1/1:4,1:4:3.01:122,3,0	1/1:2,3:5:9.03:366,9,0	1/1:1,8:9:24.08:979,24,0	1/1:3,9:12:33.11:1199,33,0	1/1:2,9:12:36.08:1270,36,0	./.
chr10	90477586	.	A	AG	1418.53	PASS	AB=0.982;AC=39;AF=0.696;AN=56;BaseQRankSum=-0.187;DP=397;FS=4.358;HRun=3;HaplotypeScore=162.9662;InbreedingCoeff=0.0121;MQ=66.12;MQ0=0;MQRankSum=10.408;QD=3.89;ReadPosRankSum=4.323;VQSLOD=0.6079;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:34:1.48:78,1,0	0/1:7,0:7:5.28:16,0,5	0/0:8,0:8:5.13:0,5,110	0/1:6,0:6:9.94:10,0,57	1/1:5,0:5:2.65:17,3,0	1/1:11,0:11:7.58:58,8,0	0/1:24,0:24:9.24:27,0,9	1/1:19,2:21:52.59:301,53,0	0/1:9,0:9:8.21:16,0,8	1/1:23,0:22:38.85:217,39,0	1/1:9,0:9:3.88:44,4,0	0/1:11,1:12:7.89:28,0,8	0/0:12,0:12:0.43:0,0,18	0/1:10,1:11:7.61:30,0,8	1/1:25,0:24:10.70:79,11,0	1/1:22,0:22:4.52:55,5,0	1/1:32,3:35:32.37:203,32,0	1/1:12,0:12:7.29:27,7,0	1/1:6,1:7:5.20:50,5,0	0/1:7,0:7:2.14:9,0,2	1/1:17,2:19:3.93:69,4,0	0/1:7,0:7:12.64:22,0,13	0/1:10,0:10:14.18:14,0,19	1/1:23,0:23:9.32:65,9,0	1/1:11,0:11:6.21:47,6,0	1/1:14,0:14:13.42:78,13,0	0/0:7,0:6:0.84:0,1,9	0/0:5,0:5:2.13:0,2,5
chr10	90477906	.	T	TTC	315.44	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=-1.373;DP=442;FS=16.194;HRun=0;HaplotypeScore=67.5973;InbreedingCoeff=0.8133;MQ=51.71;MQ0=13;MQRankSum=-0.176;QD=6.07;ReadPosRankSum=-4.748;VQSLOD=0.0556;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:33.64:0,34,237	0/0:9,0:8:8.79:0,9,60	0/0:16,0:3:4.65:0,5,28	0/0:10,0:1:3.01:0,3,33	0/0:21,0:21:41.59:0,42,329	0/0:27,0:26:61.71:0,62,451	0/0:23,0:22:38.62:0,39,277	0/0:22,0:22:49.59:0,50,375	0/0:15,0:15:20.83:0,21,166	1/1:5,2:17:21.48:160,21,0	1/1:2,7:11:8.38:103,8,0	0/0:20,0:19:47.20:0,47,352	0/0:12,0:11:20.51:0,21,150	0/0:17,0:17:32.68:0,33,232	0/0:10,0:10:23.85:0,24,179	./.	0/0:27,0:27:50.29:0,50,385	1/1:12,0:12:24.40:185,24,0	0/0:14,0:13:22.37:0,22,165	0/0:7,0:7:17.89:0,18,141	0/0:17,0:17:35.20:0,35,262	0/0:13,0:13:28.91:0,29,219	0/0:10,0:9:16.44:0,16,109	0/0:9,0:9:17.81:0,18,140	1/1:1,0:11:1.36:3,1,0	0/0:23,0:23:58.22:0,58,419	0/0:14,0:11:29.84:0,30,227	0/0:10,0:9:23.72:0,24,184
chr10	90478057	.	GGCTCAAACCCTCCCAA	G	6583.60	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.504;DP=498;FS=59.942;HRun=0;HaplotypeScore=234.7755;InbreedingCoeff=0.9910;MQ=87.03;MQ0=0;MQRankSum=-9.631;QD=94.05;ReadPosRankSum=3.213;VQSLOD=2.7078;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.19:0,75,4892	0/0:8,0:8:24.08:0,24,1883	0/0:22,0:22:60.17:0,60,2691	0/0:16,0:16:34.98:0,35,2863	0/0:18,0:18:48.16:0,48,3159	0/0:14,0:14:36.11:0,36,1914	0/0:35,0:35:99:0,102,5840	0/0:22,0:22:60.16:0,60,2871	0/0:12,0:12:33.09:0,33,1794	1/1:2,17:19:51.16:2115,51,0	1/1:1,7:8:18.06:837,18,0	0/0:16,0:16:42.14:0,42,2776	0/0:12,0:12:30.10:0,30,2158	0/0:9,0:9:27.09:0,27,1728	0/0:24,0:24:72.23:0,72,4977	1/1:2,17:19:39.13:1817,39,0	0/0:30,0:30:87.30:0,87,5781	1/1:2,14:16:24.08:1116,24,0	0/0:16,0:16:42.14:0,42,2235	0/0:7,0:7:18.06:0,18,998	0/0:41,0:41:99:0,117,7309	0/0:16,0:16:45.14:0,45,2436	0/0:14,0:14:36.11:0,36,2178	0/0:22,0:22:60.15:0,60,3679	1/1:2,6:8:15.05:699,15,0	0/0:19,0:19:54.19:0,54,3326	0/0:17,0:16:45.15:0,45,3162	0/0:11,0:11:33.11:0,33,2366
chr10	90478071	.	CAAGCTCCA	C	1476.29	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=10.282;DP=547;FS=6.252;HRun=0;HaplotypeScore=193.9414;InbreedingCoeff=0.8121;MQ=86.53;MQ0=0;MQRankSum=-9.749;QD=23.81;ReadPosRankSum=2.448;VQSLOD=2.8971;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:63.27:0,63,3201	0/0:8,0:8:24.08:0,24,1075	0/0:21,0:21:59.56:0,60,1809	0/0:22,0:22:36.04:0,36,2122	0/0:21,0:21:57.20:0,57,2110	0/0:12,0:12:33.11:0,33,1277	0/0:37,0:37:99:0,102,3375	0/0:26,0:26:69.24:0,69,2517	0/0:17,0:17:37.03:0,37,1385	0/1:17,0:17:10.01:462,0,10	1/1:7,0:7:18.06:235,18,0	0/0:15,0:15:45.15:0,45,1618	0/0:15,0:15:42.14:0,42,1528	0/0:7,0:7:21.07:0,21,826	0/0:27,0:27:81.28:0,81,3495	1/1:17,0:17:39.12:487,39,0	0/0:34,0:34:99:0,99,4159	1/1:15,0:15:11.45:261,11,0	0/0:14,6:20:1.16:0,1,1302	0/0:9,0:9:24:0,24,772	0/0:41,0:41:99:0,114,4268	0/0:12,12:24:36.59:0,37,1361	0/0:11,9:20:34:0,34,1192	0/0:25,0:25:72.25:0,72,2561	1/1:6,0:6:15.05:189,15,0	0/0:22,0:22:43.24:0,43,2160	0/0:24,0:23:69.23:0,69,2598	0/0:13,0:13:39.13:0,39,1504
chr10	90478669	.	CTGT	C	1689.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.151;DP=641;FS=5.986;HRun=0;HaplotypeScore=153.0023;InbreedingCoeff=0.8877;MQ=82.94;MQ0=0;MQRankSum=-4.137;QD=33.12;ReadPosRankSum=3.533;VQSLOD=4.1091;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,46:51:99:1784,123,0	0/0:5,0:5:12.04:0,12,249	0/0:33,0:31:71.98:0,72,1361	0/0:43,0:43:96.15:0,96,1744	0/0:6,0:6:12.04:0,12,251	0/0:13,0:13:36.12:0,36,753	0/0:31,0:31:78.27:0,78,1589	0/0:28,0:28:63.22:0,63,1274	0/0:20,0:20:45.15:0,45,879	0/0:20,0:20:48.15:0,48,891	0/0:10,0:10:30.08:0,30,543	0/0:24,0:24:57.19:0,57,1142	0/0:20,0:20:57.14:0,57,1094	0/0:25,0:25:57.19:0,57,1157	0/0:37,0:37:90.25:0,90,1723	0/0:22,0:22:54.18:0,54,1083	0/0:33,0:33:90.30:0,90,1848	0/0:22,0:22:66.09:0,66,1233	0/0:25,0:25:57.20:0,57,1178	0/0:16,0:16:45.13:0,45,870	0/0:63,0:63:99:0,166,3177	0/0:11,0:11:24.08:0,24,502	0/0:8,0:8:24.08:0,24,491	0/0:21,0:21:57.15:0,57,1099	0/0:9,0:9:24.08:0,24,502	0/0:23,0:23:60.18:0,60,1129	0/0:19,0:19:51.17:0,51,1051	0/0:3,0:3:9.03:0,9,188
chr10	90478869	.	C	CT	2688.28	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=-1.746;DP=207;FS=30.658;HRun=1;HaplotypeScore=47.8721;InbreedingCoeff=0.6006;MQ=93.96;MQ0=1;MQRankSum=-5.407;QD=16.19;ReadPosRankSum=0.505;VQSLOD=1.9347;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,2:18:37.78:292,38,0	1/1:9,0:10:14.97:141,15,0	0/0:20,0:12:24.75:0,25,210	0/0:21,0:15:31.93:0,32,260	1/1:4,0:4:2.99:24,3,0	1/1:1,0:1:2.99:24,3,0	1/1:8,0:8:17.22:116,17,0	1/1:13,0:13:35.46:275,35,0	1/1:5,0:5:14.70:96,15,0	1/1:8,1:9:26.76:219,27,0	1/1:5,0:5:11.98:97,12,0	1/1:5,0:5:11.42:72,11,0	1/1:2,0:2:5.67:28,6,0	1/1:4,0:4:8.62:53,9,0	1/1:10,0:10:10.64:58,11,0	1/1:8,2:10:29.73:217,30,0	1/1:12,0:12:23.79:177,24,0	1/1:9,0:9:23.78:172,24,0	1/1:7,0:7:20.86:158,21,0	1/1:1,0:1:3:25,3,0	1/1:6,0:6:17.72:128,18,0	1/1:5,0:5:8.30:37,8,0	1/1:3,0:3:8.96:69,9,0	1/1:4,0:4:8.67:60,9,0	1/1:5,0:5:11.93:93,12,0	1/1:4,0:4:10.75:71,11,0	1/1:6,0:6:14.94:117,15,0	./.
chr10	90478874	.	C	CCCCTG	501.19	PASS	AB=0.916;AC=9;AF=0.173;AN=52;BaseQRankSum=-1.018;DP=170;FS=7.018;HRun=0;HaplotypeScore=67.4415;InbreedingCoeff=0.1076;MQ=92.79;MQ0=2;MQRankSum=-2.885;QD=7.26;ReadPosRankSum=2.770;VQSLOD=0.7685;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:44.01:44,0,66	1/1:7,0:8:9.87:160,10,0	0/0:19,0:10:6.03:0,6,168	0/0:20,0:14:20.60:0,21,225	0/0:3,0:3:2.90:0,3,16	0/0:1,0:1:2.92:0,3,17	0/0:5,0:5:14.76:0,15,123	0/0:9,0:9:17.10:0,17,98	0/0:4,0:4:8.61:0,9,47	0/1:7,0:7:13.31:13,0,45	0/0:3,0:3:0:0,0,1	0/0:4,0:4:8.78:0,9,52	0/0:3,0:3:4.98:0,5,24	0/0:3,0:3:5.85:0,6,35	0/1:3,7:11:16.50:123,0,17	0/1:7,0:7:41.08:41,0,91	1/1:12,0:12:16.99:235,17,0	0/1:8,0:8:19.41:19,0,73	0/0:4,0:4:8.71:0,9,48	./.	0/0:4,0:4:5.83:0,6,33	0/0:5,0:5:5.85:0,6,35	0/0:2,0:2:2.90:0,3,16	0/0:3,0:3:2.92:0,3,17	0/0:2,0:2:2.79:0,3,13	0/0:3,0:3:8.76:0,9,51	0/0:4,0:4:3.48:0,3,36	./.
chr10	90478877	.	C	CTG	171.75	PASS	AB=0.793;AC=3;AF=0.058;AN=52;BaseQRankSum=-2.067;DP=160;FS=28.752;HRun=0;HaplotypeScore=50.6176;InbreedingCoeff=-0.0469;MQ=83.23;MQ0=2;MQRankSum=-1.499;QD=5.72;ReadPosRankSum=1.895;VQSLOD=1.3358;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:28.42:0,28,211	0/1:3,3:8:46.85:104,0,47	0/0:18,0:7:17.86:0,18,201	0/0:18,0:12:21.57:0,22,216	0/0:3,0:3:2.90:0,3,16	0/0:1,0:1:2.92:0,3,17	0/0:6,0:6:9.21:0,9,51	0/0:8,0:8:17.45:0,17,100	0/0:3,0:3:8.61:0,9,47	0/0:5,0:6:11.97:0,12,68	0/0:2,0:2:0:0,0,0	0/0:4,0:4:8.78:0,9,52	0/0:3,0:3:4.98:0,5,24	0/0:3,0:3:5.85:0,6,35	0/1:9,0:9:19.73:20,0,36	0/0:5,0:7:19.20:0,19,126	0/1:9,4:13:60.03:144,0,60	0/0:9,0:9:17.85:0,18,176	0/0:3,0:3:8.71:0,9,48	./.	0/0:4,0:4:5.83:0,6,33	0/0:6,0:6:5.85:0,6,35	0/0:2,0:2:2.90:0,3,16	0/0:1,0:1:2.92:0,3,17	0/0:2,0:2:2.80:0,3,13	0/0:3,0:3:8.76:0,9,51	0/0:1,0:1:3.01:0,3,39	./.
chr10	90479471	.	CGT	C	999.49	PASS	AB=0.973;AC=22;AF=0.393;AN=56;BaseQRankSum=1.981;DP=616;FS=50.625;HRun=0;HaplotypeScore=151.3511;InbreedingCoeff=-0.0918;MQ=54.00;MQ0=5;MQRankSum=0.470;QD=2.41;ReadPosRankSum=-2.851;VQSLOD=0.5778;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:62.80:0,63,797	0/0:3,0:3:9.03:0,9,179	0/0:20,0:10:30.09:0,30,465	0/0:23,0:11:30.09:0,30,462	0/1:21,1:21:8.05:30,0,8	0/0:18,1:18:8.31:0,8,87	0/1:19,1:19:43.17:43,0,58	1/1:18,0:18:7.43:23,7,0	0/1:20,0:20:23.84:24,0,83	0/1:19,0:19:17.77:68,0,18	0/1:14,0:14:0:0,0,0	0/1:32,0:32:87.16:87,0,247	1/1:19,2:21:1.95:136,2,0	0/1:29,2:30:9.07:9,0,212	0/0:27,0:27:78.25:0,78,1232	1/1:33,5:37:8.64:265,9,0	0/0:28,0:28:68.39:0,68,1104	0/1:11,0:11:8.34:18,0,8	0/1:18,1:19:70.86:106,0,71	0/1:18,0:18:6.74:7,0,72	0/1:41,2:43:87.67:88,0,191	1/1:17,0:17:2.99:23,3,0	0/0:16,0:16:3.11:0,3,15	0/1:27,0:27:45.42:45,0,132	0/1:16,3:19:42.17:74,0,42	0/1:26,0:26:33.65:114,0,34	0/0:19,0:19:10.41:0,10,114	0/0:7,0:7:8.39:0,8,70
chr10	90479475	.	C	CAT	954.67	PASS	AB=0.981;AC=9;AF=0.161;AN=56;BaseQRankSum=-3.308;DP=685;FS=10.489;HRun=0;HaplotypeScore=171.0144;InbreedingCoeff=0.2506;MQ=51.96;MQ0=7;MQRankSum=2.749;QD=5.86;ReadPosRankSum=-3.342;VQSLOD=1.9385;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:59.22:0,59,438	0/0:4,0:4:8.98:0,9,109	0/0:18,0:8:20.84:0,21,169	0/0:21,0:9:23.90:0,24,205	0/1:23,0:22:34.49:34,0,214	0/0:22,0:21:44.42:0,44,404	0/0:21,0:20:38.64:0,39,343	0/0:25,0:25:20.87:0,21,339	0/0:23,0:23:39.30:0,39,386	0/1:21,0:21:13.54:222,0,14	0/0:5,10:15:2.73:0,3,25	0/0:35,0:35:35.33:0,35,700	0/1:25,0:25:7.99:8,0,274	0/0:39,0:38:21.28:0,21,610	0/0:34,0:34:80.68:0,81,738	1/1:36,1:36:43.61:543,44,0	0/0:33,0:32:39.61:0,40,554	1/1:15,0:15:2.73:51,3,0	0/1:24,1:23:81.28:81,0,214	0/0:16,0:16:23.97:0,24,234	0/0:54,0:53:65.11:0,65,796	0/0:19,0:19:20.91:0,21,165	0/0:19,0:19:17.04:0,17,142	0/0:31,0:31:25.70:0,26,209	0/1:16,1:17:19.15:157,0,19	0/0:25,0:25:15.24:0,15,410	0/0:23,0:22:25.52:0,26,412	0/0:5,0:5:14.82:0,15,122
chr10	90479587	.	C	CT	16419.69	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-0.849;DP=590;FS=12.342;HRun=1;HaplotypeScore=87.3681;InbreedingCoeff=0.9766;MQ=70.97;MQ0=1;MQRankSum=-0.400;QD=39.47;ReadPosRankSum=1.728;VQSLOD=4.4233;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,108,1387	0/0:8,0:8:21.07:0,21,273	0/0:29,0:26:72.20:0,72,886	0/0:27,0:27:60.03:0,60,729	1/1:0,16:16:36.12:539,36,0	1/1:0,13:13:36.09:515,36,0	1/1:0,16:16:48.16:719,48,0	1/1:2,16:18:45.15:668,45,0	1/1:2,17:19:48.16:719,48,0	1/1:0,19:19:57.14:809,57,0	1/1:1,12:13:30.10:440,30,0	1/1:0,27:27:81.27:1214,81,0	1/1:0,19:19:57.12:806,57,0	1/1:1,21:22:57.19:854,57,0	0/0:25,0:25:75.24:0,75,972	1/1:0,24:24:66.22:988,66,0	0/0:44,0:44:99:0,126,1572	1/1:0,11:11:27.09:405,27,0	1/1:3,20:23:63.21:925,63,0	1/1:1,14:15:39.09:560,39,0	1/1:2,37:39:99:1573,105,0	1/1:0,8:8:21.07:315,21,0	1/1:0,10:10:24.08:360,24,0	1/1:1,42:43:99:1568,105,0	1/1:1,14:15:39.13:584,39,0	1/1:1,16:17:48.14:692,48,0	1/1:0,27:27:72.24:1078,72,0	1/1:1,1:2:6.02:88,6,0
chr10	90479688	.	AAAAAAAC	A	3019.25	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=2.082;DP=522;FS=33.455;HRun=0;HaplotypeScore=145.7469;InbreedingCoeff=0.8890;MQ=57.65;MQ0=5;MQRankSum=-6.267;QD=36.38;ReadPosRankSum=2.897;VQSLOD=1.2872;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:69.24:0,69,2459	0/0:7,0:7:12.04:0,12,433	0/0:20,0:14:11.96:0,12,257	0/0:19,0:15:5.99:0,6,104	0/0:15,0:24:51.17:0,51,1253	0/0:9,0:14:18.05:0,18,458	0/0:7,0:8:18.05:0,18,424	0/0:22,0:25:36.12:0,36,902	0/0:6,0:14:21.07:0,21,637	1/1:3,15:18:36.11:742,36,0	1/1:4,12:15:30.10:679,30,0	0/0:14,0:20:36.05:0,36,860	0/0:11,0:17:24.05:0,24,690	0/0:11,0:21:21.06:0,21,563	0/0:20,0:20:45.15:0,45,1442	1/1:5,12:16:24.08:543,24,0	0/0:28,0:28:60.20:0,60,2193	1/1:3,2:5:3.01:68,3,0	0/0:15,0:15:21.01:0,21,341	0/0:15,0:24:60.20:0,60,1558	0/0:12,0:12:11.99:0,12,252	0/0:6,0:12:24.08:0,24,735	0/0:11,0:24:36.12:0,36,1003	0/0:12,0:19:9.03:0,9,237	1/1:5,22:27:51.17:1154,51,0	0/0:19,0:29:54.19:0,54,1561	0/0:13,0:22:21.03:0,21,476	0/0:3,0:5:15.05:0,15,399
chr10	90479781	.	A	ATTAGAACTATATCTTTT	39865.87	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.284;DP=356;FS=12.479;HRun=0;HaplotypeScore=176.9598;InbreedingCoeff=0.8122;MQ=46.71;MQ0=0;MQRankSum=-2.793;QD=118.65;ReadPosRankSum=1.159;VQSLOD=4.2340;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:20:30.10:1760,30,0	1/1:5,0:5:15.03:812,15,0	0/0:9,0:7:18.03:0,18,365	0/0:8,0:5:9.03:0,9,289	1/1:24,0:26:60.62:2891,61,0	1/1:12,0:12:36.12:1395,36,0	1/1:5,0:5:15.05:578,15,0	1/1:18,0:16:45.12:1659,45,0	1/1:7,0:7:15.05:380,15,0	1/1:16,1:17:38.65:2135,39,0	1/1:19,0:19:48.08:2282,48,0	1/1:11,0:11:27.07:1442,27,0	1/1:9,0:9:24.08:1307,24,0	1/1:6,0:6:12.04:727,12,0	1/1:19,0:18:57.12:2583,57,0	1/1:15,1:17:45.03:2442,45,0	1/1:7,0:11:21.07:1223,21,0	1/1:6,1:7:21.04:821,21,0	1/1:16,0:16:45.13:2377,45,0	1/1:17,0:17:48.16:2165,48,0	1/1:4,0:4:9.03:445,9,0	1/1:3,0:8:12.04:668,12,0	1/1:13,0:14:33.11:1449,33,0	1/1:3,0:3:3.48:60,3,0	1/1:16,3:20:50.99:2493,51,0	1/1:11,0:14:42.09:2287,42,0	1/1:13,0:12:27.09:1765,27,0	1/1:15,0:16:45.02:1722,45,0
chr10	90480344	.	TCCAACGCACACCAG	T	9242.91	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.725;DP=748;FS=4.774;HRun=0;HaplotypeScore=340.6308;InbreedingCoeff=0.9908;MQ=78.58;MQ0=0;MQRankSum=-12.669;QD=94.32;ReadPosRankSum=2.474;VQSLOD=3.9168;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,9511	0/0:5,0:5:12.04:0,12,813	0/0:19,0:19:39.58:0,40,2829	0/0:18,0:18:46.70:0,47,2538	0/0:31,0:31:84.29:0,84,5572	0/0:21,0:21:63.22:0,63,4385	0/0:37,0:36:99:0,108,7210	0/0:38,0:38:99:0,111,7002	0/0:28,0:28:84.29:0,84,5609	1/1:4,16:20:51.16:1955,51,0	1/1:1,15:16:42.14:1723,42,0	0/0:27,0:27:81.28:0,81,5392	0/0:16,0:16:48.16:0,48,3165	0/0:25,0:25:75.26:0,75,4825	0/0:49,0:49:99:0,144,8764	1/1:3,29:32:84.29:3584,84,0	0/0:34,0:34:99:0,102,6832	1/1:5,13:18:30.10:1213,30,0	0/0:20,0:20:57.18:0,57,3225	0/0:24,0:24:72.25:0,72,4997	0/0:47,0:47:99:0,141,9355	0/0:31,0:31:90.29:0,90,6013	0/0:19,0:19:54.14:0,54,3035	0/0:23,0:23:66.18:0,66,4154	1/1:5,7:12:18.06:768,18,0	0/0:38,0:38:99:0,114,7578	0/0:41,0:39:99:0,123,7942	0/0:11,0:11:33.11:0,33,2282
chr10	90480956	.	AAGAC	A	1236.11	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.033;DP=569;FS=0.742;HRun=0;HaplotypeScore=96.5890;InbreedingCoeff=0.9665;MQ=79.98;MQ0=0;MQRankSum=-5.226;QD=34.34;ReadPosRankSum=-0.980;VQSLOD=3.0937;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:78.27:0,78,1971	0/0:16,0:16:48.14:0,48,1216	0/0:25,0:24:60.06:0,60,1467	0/0:30,0:28:72.70:0,73,1751	0/0:24,0:24:69.24:0,69,1829	0/0:24,0:24:72.23:0,72,1870	0/0:21,0:21:60.21:0,60,1619	0/0:23,0:23:60.21:0,60,1588	0/0:23,0:23:60.21:0,60,1543	1/1:0,6:6:18:212,18,0	1/1:0,4:4:9.03:167,9,0	0/0:19,0:19:51.18:0,51,1344	0/0:26,0:26:75.26:0,75,1888	0/0:18,0:18:54.17:0,54,1366	0/0:37,0:37:99:0,105,2797	1/1:0,16:16:30.10:568,30,0	0/0:25,0:25:75.26:0,75,1977	1/1:0,7:7:15.05:284,15,0	0/0:19,0:19:51.17:0,51,1287	0/0:16,0:16:48.15:0,48,1201	0/0:30,0:29:87.28:0,87,2233	0/0:18,0:18:54.13:0,54,1220	0/0:14,0:14:42.14:0,42,1085	0/0:21,0:21:60.21:0,60,1521	1/1:0,3:3:9.03:170,9,0	0/0:28,0:28:81.28:0,81,2061	0/0:29,0:28:87.30:0,87,2302	0/0:13,0:13:39.13:0,39,1051
chr10	90480990	.	GT	G	646.41	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.880;DP=551;FS=3.449;HRun=9;HaplotypeScore=67.4433;InbreedingCoeff=0.8338;MQ=70.77;MQ0=0;MQRankSum=-2.039;QD=17.47;ReadPosRankSum=-1.315;VQSLOD=3.5446;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:4,33:37:81.03:741,81,0	0/0:12,0:12:36.11:0,36,415	0/0:17,1:18:2.59:0,3,266	0/0:16,0:16:21.04:0,21,225	0/0:18,1:19:29.69:0,30,581	0/0:21,0:21:60.15:0,60,672	0/0:16,0:16:42.08:0,42,470	0/0:26,0:26:60.17:0,60,684	0/0:21,0:21:60.18:0,60,692	0/0:11,0:11:33.09:0,33,375	0/0:11,0:11:30.05:0,30,331	0/0:17,0:18:47.96:0,48,524	0/0:23,0:23:60.17:0,60,686	0/0:15,0:15:42.12:0,42,485	0/0:35,0:35:93.24:0,93,1060	0/0:27,0:27:63.19:0,63,727	0/0:27,0:27:72.20:0,72,822	0/0:14,0:14:33.04:0,33,356	0/0:18,1:19:26.70:0,27,561	0/0:18,0:18:52.40:0,52,588	0/0:21,0:21:57.16:0,57,650	0/0:17,0:17:45.09:0,45,505	0/0:10,0:10:27.08:0,27,311	0/0:24,0:24:72.16:0,72,807	0/0:12,0:12:36.11:0,36,415	0/0:28,0:28:72.20:0,72,816	0/0:28,0:27:84.21:0,84,940	0/0:7,0:7:21.06:0,21,242
chr10	90483667	.	A	AT	5267.11	PASS	AB=0.707;AC=42;AF=0.750;AN=56;BaseQRankSum=-3.394;DP=636;FS=17.745;HRun=13;HaplotypeScore=84.6768;InbreedingCoeff=0.3928;MQ=66.56;MQ0=0;MQRankSum=-0.387;QD=9.88;ReadPosRankSum=-1.100;VQSLOD=2.1498;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,1:34:40.09:225,40,0	0/1:3,0:4:15.62:16,0,18	0/0:16,0:12:17.73:0,18,118	0/0:8,0:5:5.55:0,6,30	0/1:8,17:25:11.15:305,0,11	1/1:7,14:21:9.41:221,9,0	0/1:8,13:21:11.12:193,0,11	0/1:22,14:38:1.78:212,0,2	1/1:7,13:21:20.86:182,21,0	1/1:18,0:18:9.61:102,10,0	1/1:25,0:25:41.51:196,42,0	1/1:10,22:32:24.45:362,24,0	1/1:4,14:18:14.78:139,15,0	1/1:6,14:21:25.10:208,25,0	0/0:42,0:42:57.75:0,58,508	1/1:28,1:29:9.36:179,9,0	0/0:33,3:37:35.49:0,35,520	1/1:19,0:19:44.79:219,45,0	0/1:14,15:30:16.80:259,0,17	1/1:5,11:17:7.56:170,8,0	1/1:6,15:21:30.03:279,30,0	1/1:4,10:14:9.40:222,9,0	1/1:5,8:14:20.85:178,21,0	1/1:3,22:25:33.48:453,33,0	1/1:18,0:18:34.82:178,35,0	1/1:10,20:33:63.42:532,63,0	0/1:16,14:31:30.16:154,0,30	1/1:0,4:4:9.01:84,9,0
chr10	90483680	.	T	TC	2719.61	PASS	AB=0.995;AC=16;AF=0.286;AN=56;BaseQRankSum=-1.995;DP=605;FS=0.435;HRun=1;HaplotypeScore=86.1553;InbreedingCoeff=0.4876;MQ=68.83;MQ0=0;MQRankSum=-0.837;QD=11.33;ReadPosRankSum=5.850;VQSLOD=1.8767;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:48.56:0,49,287	0/0:5,0:5:12.42:0,12,108	0/0:17,0:13:28.59:0,29,207	0/0:8,0:6:0.94:0,1,54	0/0:24,0:24:9.91:0,10,216	0/0:19,0:19:3.54:0,4,104	0/1:22,0:22:2.87:3,0,204	0/0:29,0:29:42.48:0,42,359	0/1:16,0:16:0.17:0,0,27	1/1:3,15:18:47.25:504,47,0	1/1:2,25:28:62.78:668,63,0	0/0:33,0:33:5.75:0,6,185	0/1:13,0:13:0.38:0,0,40	0/0:16,0:16:10.11:0,10,103	0/0:39,0:39:99:0,103,1176	1/1:5,24:29:51.51:607,52,0	0/0:36,0:36:83.94:0,84,1029	1/1:0,22:23:51.09:617,51,0	0/0:26,0:26:32.27:0,32,322	0/0:18,0:18:20.92:0,21,184	0/1:17,0:17:5.51:6,0,33	0/0:16,0:16:10.16:0,10,137	0/0:11,0:11:9.72:0,10,80	0/1:25,0:25:10.85:11,0,64	1/1:1,17:18:36.11:455,36,0	0/1:30,1:31:21.36:21,0,188	0/0:22,0:22:24.84:0,25,277	0/0:11,0:11:14.72:0,15,170
chr10	90483982	.	CCTT	C	2813.77	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.866;DP=553;FS=3.979;HRun=0;HaplotypeScore=87.0197;InbreedingCoeff=0.9712;MQ=92.43;MQ0=0;MQRankSum=-3.997;QD=39.63;ReadPosRankSum=2.098;VQSLOD=4.5243;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.24:0,75,1660	1/1:0,4:4:11.95:142,12,0	0/0:27,0:27:71.90:0,72,1375	0/0:29,0:28:68.72:0,69,1335	0/0:12,0:12:33.10:0,33,695	0/0:17,0:17:51.16:0,51,1109	0/0:31,0:31:87.28:0,87,1963	0/0:23,0:23:60.19:0,60,1300	0/0:18,0:18:51.16:0,51,1108	0/0:10,0:10:30.10:0,30,691	0/0:14,0:14:30.48:0,30,667	0/0:19,0:19:51.18:0,51,1176	0/0:25,0:25:75.24:0,75,1676	0/0:24,0:24:72.25:0,72,1640	1/1:1,33:34:81.28:1380,81,0	0/0:27,0:27:78.27:0,78,1799	1/1:0,33:33:84.29:1431,84,0	0/0:19,0:19:51.18:0,51,1173	0/0:17,0:17:42.10:0,42,837	0/0:10,0:10:30.10:0,30,691	0/0:36,0:36:99:0,99,2133	0/0:15,0:15:39.13:0,39,898	0/0:4,0:4:12:0,12,227	0/0:21,0:21:63.20:0,63,1407	0/0:10,0:10:27.08:0,27,578	0/0:18,0:18:51.16:0,51,1087	0/0:24,0:24:69.22:0,69,1528	0/0:5,0:5:15.05:0,15,345
chr10	90484310	.	C	CAG	29226.52	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-9.259;DP=687;FS=3.748;HRun=0;HaplotypeScore=69.7281;InbreedingCoeff=0.9970;MQ=88.85;MQ0=4;MQRankSum=-10.680;QD=45.88;ReadPosRankSum=5.951;VQSLOD=6.4033;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,45:45:99:2419,132,0	1/1:0,9:9:21.07:383,21,0	0/0:28,0:28:72.22:0,72,994	0/0:22,0:22:51.14:0,51,706	1/1:0,19:19:54.66:990,55,0	1/1:2,17:20:48.16:880,48,0	1/1:0,26:26:66.23:1210,66,0	1/1:3,30:33:90.29:1615,90,0	1/1:1,27:30:81.28:1477,81,0	1/1:0,19:19:57.18:1010,57,0	1/1:1,15:17:39.13:711,39,0	1/1:0,19:19:57.20:1044,57,0	1/1:2,13:15:33.11:605,33,0	1/1:1,29:31:81.28:1483,81,0	1/1:3,32:35:90.31:1629,90,0	1/1:3,24:26:60.21:1100,60,0	1/1:1,33:34:90.31:1642,90,0	1/1:2,21:23:57.20:1045,57,0	1/1:3,19:23:60.19:1041,60,0	1/1:2,13:15:33.11:604,33,0	1/1:1,43:43:99:2090,114,0	1/1:2,14:16:30.10:550,30,0	1/1:3,19:22:36.12:659,36,0	1/1:4,35:39:90.31:1649,90,0	1/1:2,16:18:45.15:825,45,0	1/1:1,19:19:54.14:917,54,0	1/1:2,22:23:60.21:1099,60,0	1/1:0,13:13:30.10:550,30,0
chr10	90484718	.	GGGCCTCGTC	G	24200.25	PASS	AC=32;AF=0.593;AN=54;BaseQRankSum=18.410;DP=717;FS=8.178;HRun=0;HaplotypeScore=223.3420;InbreedingCoeff=0.9997;MQ=69.60;MQ0=0;MQRankSum=-18.942;QD=58.03;ReadPosRankSum=-2.468;VQSLOD=3.2472;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,154,7037	0/0:13,0:13:36.12:0,36,1664	0/0:24,0:24:55.74:0,56,2132	0/0:23,0:23:56.89:0,57,1951	1/1:5,20:25:41.87:1257,42,0	1/1:0,18:18:39.13:1170,39,0	1/1:6,29:35:60.21:1764,60,0	1/1:3,20:23:60.05:1459,60,0	1/1:5,25:30:69.24:2069,69,0	0/0:25,0:25:72.25:0,72,3353	0/0:14,0:14:27.09:0,27,1290	1/1:1,29:30:75.26:2234,75,0	1/1:5,24:29:66.22:1889,66,0	1/1:7,27:34:63.15:1779,63,0	0/0:34,0:34:96.23:0,96,4024	0/0:39,0:39:99:0,114,5152	0/0:34,0:34:93.29:0,93,4138	0/0:24,0:24:72.19:0,72,3177	1/1:2,12:14:36.06:818,36,0	1/1:0,13:13:36.12:1049,36,0	1/1:14,38:52:69.24:1879,69,0	1/1:1,11:12:36.12:1062,36,0	1/1:3,16:19:36.12:1046,36,0	1/1:4,30:34:58.07:1479,58,0	0/0:16,0:16:48.16:0,48,2180	1/1:4,26:30:74.35:1896,74,0	1/1:3,16:19:45.15:1349,45,0	./.
chr10	90484719	.	GGCCTCGTC	G	13619.03	PASS	AB=0.989;AC=27;AF=0.500;AN=54;BaseQRankSum=19.971;DP=714;FS=6.573;HRun=0;HaplotypeScore=246.0341;InbreedingCoeff=0.6608;MQ=70.22;MQ0=0;MQRankSum=-19.561;QD=32.90;ReadPosRankSum=1.269;VQSLOD=3.8805;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,162,7030	0/0:13,0:13:36.12:0,36,1607	0/0:24,0:24:68.32:0,68,2342	0/0:24,0:24:62.68:0,63,2250	1/1:23,1:24:20.25:731,20,0	1/1:18,0:18:39.13:703,39,0	0/1:34,0:34:6.38:973,0,6	0/1:23,0:23:90.65:744,0,91	1/1:28,2:30:69.24:1244,69,0	0/0:25,0:25:75.25:0,75,3275	0/0:13,0:13:33.11:0,33,1364	1/1:30,0:30:51.78:1310,52,0	1/1:29,0:29:24.69:1052,25,0	0/1:32,2:34:58.52:969,0,59	0/0:34,0:34:99:0,99,4063	0/0:39,0:39:99:0,114,5067	0/0:33,0:33:99:0,99,4155	0/0:24,0:24:72.25:0,72,3092	0/1:14,0:14:46.93:437,0,47	1/1:13,0:13:36.11:619,36,0	1/1:52,0:52:13.54:995,14,0	1/1:11,1:12:36.12:635,36,0	1/1:18,1:19:36.12:617,36,0	0/1:34,0:34:2.59:748,0,3	0/0:17,0:17:48.16:0,48,2149	1/1:28,1:29:13.76:1064,14,0	1/1:18,1:19:16.33:777,16,0	./.
chr10	90485034	.	AAGGGGG	A	1011.63	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.963;DP=751;FS=0.957;HRun=0;HaplotypeScore=183.3389;InbreedingCoeff=0.9953;MQ=72.77;MQ0=1;MQRankSum=-6.582;QD=32.63;ReadPosRankSum=1.597;VQSLOD=3.6426;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,23:30:48.16:1107,48,0	0/0:11,0:11:33.11:0,33,1075	0/0:23,0:23:48.16:0,48,1456	0/0:33,0:30:77.12:0,77,2156	0/0:16,0:16:39.13:0,39,1314	0/0:23,0:23:66.23:0,66,2217	0/0:47,0:47:99:0,132,4318	0/0:29,0:29:78.25:0,78,2195	0/0:29,0:29:84.25:0,84,2645	0/0:19,0:19:54.19:0,54,1799	0/0:12,0:12:36.12:0,36,1267	0/0:44,0:44:99:0,123,4266	0/0:23,0:23:69.24:0,69,2329	0/0:26,0:26:72.25:0,72,2449	0/0:26,0:26:78.26:0,78,2515	0/0:23,0:23:60.21:0,60,2120	0/0:34,0:34:93.29:0,93,3042	0/0:34,0:34:99:0,102,3306	0/0:21,0:21:54.19:0,54,1823	0/0:12,0:12:33.11:0,33,1097	0/0:70,0:70:99:0,196,6496	0/0:23,0:23:69.19:0,69,2307	0/0:23,0:23:69.23:0,69,2118	0/0:45,0:45:99:0,129,4199	0/0:24,0:24:69.23:0,69,2319	0/0:23,0:23:63.21:0,63,2073	0/0:19,0:19:57.20:0,57,1894	0/0:8,0:8:21.06:0,21,656
chr10	90486032	.	TACAG	T	5655.75	PASS	AB=0.866;AC=34;AF=0.607;AN=56;BaseQRankSum=8.814;DP=778;FS=3.502;HRun=0;HaplotypeScore=395.3804;InbreedingCoeff=0.7177;MQ=37.27;MQ0=3;MQRankSum=-9.249;QD=11.91;ReadPosRankSum=-6.310;VQSLOD=2.2574;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:12.03:0,12,431	0/0:12,0:12:20.24:0,20,513	0/0:36,0:24:66.02:0,66,1305	0/0:37,0:22:50.33:0,50,1147	1/1:2,17:19:1.41:4,1,0	1/1:15,14:29:16.44:198,16,0	1/1:10,16:26:8.26:81,8,0	1/1:19,24:43:95.17:1443,95,0	1/1:11,12:23:13.89:125,14,0	0/0:34,0:34:87.30:0,87,2338	0/1:23,0:23:2.17:2,0,74	1/1:28,13:41:26.26:357,26,0	1/1:12,14:26:24.14:516,24,0	1/1:3,28:31:14.26:205,14,0	0/0:35,0:35:1.97:0,2,234	0/0:40,0:40:15.59:0,16,495	0/0:28,0:28:18.25:0,18,727	0/0:14,0:14:23.91:0,24,507	1/1:4,22:25:66.01:1048,66,0	1/1:9,6:15:1.76:4,2,0	0/1:26,15:40:0.18:1,0,0	1/1:7,11:18:6.55:61,7,0	1/1:2,15:17:0.89:2,1,0	1/1:13,15:27:1.72:4,2,0	0/0:26,0:26:0.50:0,0,226	1/1:11,15:26:52.21:887,52,0	1/1:17,20:37:27.88:686,28,0	1/1:6,0:6:5.71:32,6,0
chr10	90486034	.	CAG	C	2029.94	PASS	AB=0.994;AC=32;AF=0.571;AN=56;BaseQRankSum=10.456;DP=764;FS=4.273;HRun=0;HaplotypeScore=379.8456;InbreedingCoeff=0.5096;MQ=37.23;MQ0=6;MQRankSum=-8.427;QD=4.04;ReadPosRankSum=-4.636;VQSLOD=1.0723;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:13.25:0,13,393	0/0:12,0:12:21.07:0,21,373	0/0:36,0:22:65.83:0,66,1035	0/0:40,0:21:49.32:0,49,845	1/1:18,0:18:1.41:4,1,0	0/1:28,1:29:1.26:44,0,1	0/1:26,0:26:6.06:29,0,6	1/1:39,0:38:93.52:627,94,0	0/1:23,0:23:6.14:33,0,6	0/0:31,0:31:87.30:0,87,1673	0/1:23,0:23:2.17:2,0,51	1/1:40,0:40:25.87:153,26,0	1/1:25,1:26:28.20:236,28,0	1/1:30,0:30:12.98:74,13,0	0/0:35,0:35:0.16:0,0,196	0/1:39,0:39:18.32:18,0,308	0/0:30,0:30:32.05:0,32,570	0/0:14,0:14:23.91:0,24,357	1/1:24,0:23:43.22:391,43,0	1/1:15,0:15:1.65:4,2,0	0/1:41,0:40:0.34:1,0,0	1/1:18,0:18:6.42:23,6,0	1/1:17,0:17:0.89:2,1,0	1/1:28,1:28:0.45:2,0,0	0/0:26,0:26:4.62:0,5,167	1/1:23,1:24:37.86:306,38,0	1/1:36,0:36:11.61:230,12,0	1/1:5,0:5:5.19:27,5,0
chr10	90486040	.	C	CAG	814.24	PASS	AB=1.000;AC=16;AF=0.308;AN=52;BaseQRankSum=5.293;DP=779;FS=2.493;HRun=0;HaplotypeScore=354.4216;InbreedingCoeff=0.0874;MQ=37.08;MQ0=18;MQRankSum=-6.146;QD=2.38;ReadPosRankSum=-0.602;VQSLOD=1.0738;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:8.81:0,9,308	0/0:11,0:11:24.06:0,24,332	0/0:45,0:20:51.11:0,51,712	0/0:53,0:23:59.23:0,59,744	./.	0/1:28,0:28:0.95:1,0,75	0/1:25,0:25:26.59:28,0,27	1/1:33,0:31:2.15:342,2,0	0/1:24,0:24:7.59:8,0,68	0/0:36,0:35:91.63:0,92,1348	0/0:21,0:21:3.01:0,3,46	0/1:39,0:38:35.35:80,0,35	0/1:23,0:23:51.62:52,0,84	1/1:29,0:29:11.65:74,12,0	0/0:33,0:33:15.81:0,16,209	0/0:38,0:38:5.03:0,5,245	0/0:33,0:33:36.52:0,37,520	0/0:17,0:16:7.92:0,8,289	0/1:27,0:24:44.16:142,0,44	0/1:12,0:12:0:0,0,0	0/1:43,0:42:0.42:1,0,0	0/0:18,0:18:1.82:0,2,5	./.	0/0:31,0:30:0.89:0,1,2	0/0:25,0:25:13.46:0,13,148	0/1:20,0:20:61.05:115,0,61	0/1:34,0:34:59.16:59,0,155	1/1:1,4:5:3:54,3,0
chr10	90486050	.	CAT	C	1014.62	PASS	AB=0.957;AC=34;AF=0.607;AN=56;BaseQRankSum=8.990;DP=772;FS=12.419;HRun=0;HaplotypeScore=303.8831;InbreedingCoeff=0.3721;MQ=36.07;MQ0=23;MQRankSum=-5.694;QD=2.04;ReadPosRankSum=-4.666;VQSLOD=0.5576;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,3:40:12.73:13,0,576	0/0:12,0:12:21.06:0,21,301	0/0:52,1:16:41.87:0,42,664	0/0:58,0:20:47.05:0,47,779	1/1:14,0:14:1.41:4,1,0	1/1:30,0:30:11.42:48,11,0	1/1:24,0:24:8.23:57,8,0	0/1:29,0:27:8.06:8,0,55	1/1:24,0:24:15.06:92,15,0	0/0:38,0:38:35.84:0,36,1460	0/1:18,0:18:42.47:42,0,47	1/1:35,0:34:19.32:129,19,0	1/1:22,2:24:21.27:157,21,0	1/1:24,0:24:11.45:43,11,0	0/1:35,0:35:10.21:10,0,375	0/1:33,2:35:20.88:21,0,181	0/0:34,2:36:9.83:0,10,558	0/1:16,3:18:28.55:29,0,242	1/1:21,0:18:11.48:70,11,0	1/1:11,0:11:4.59:22,5,0	0/0:42,3:44:0.44:0,0,2	1/1:15,0:15:3.99:12,4,0	1/1:16,0:16:0.89:2,1,0	1/1:29,4:32:0.38:2,0,0	0/0:25,0:25:6.61:0,7,169	1/1:19,1:20:33.17:180,33,0	1/1:30,0:30:25.47:252,25,0	0/0:6,0:6:2.92:0,3,17
chr10	90486058	.	CAG	C	2353.94	PASS	AB=1.000;AC=34;AF=0.630;AN=54;BaseQRankSum=5.704;DP=770;FS=19.494;HRun=0;HaplotypeScore=257.8575;InbreedingCoeff=0.3301;MQ=37.42;MQ0=23;MQRankSum=-3.610;QD=4.55;ReadPosRankSum=-3.752;VQSLOD=1.2542;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:23.52:0,24,621	0/0:13,0:13:16.17:0,16,65	0/0:46,0:12:20.22:0,20,413	0/0:58,0:19:38.10:0,38,587	1/1:10,3:13:1.41:4,1,0	1/1:9,19:29:13.94:121,14,0	1/1:11,19:30:4.30:80,4,0	0/1:28,0:26:99:143,0,107	1/1:3,18:21:11.69:171,12,0	0/0:39,0:38:6.95:0,7,1122	0/1:19,0:19:40.91:85,0,41	1/1:7,30:36:18.50:227,19,0	1/1:6,18:24:23.38:257,23,0	1/1:22,4:26:18.98:116,19,0	0/0:35,0:35:11.91:0,12,93	0/1:31,0:31:23.64:24,0,155	0/1:39,0:39:13.40:13,0,93	0/1:18,0:17:28.50:29,0,218	1/1:19,1:18:12.42:233,12,0	1/1:2,7:9:3.78:45,4,0	1/1:32,18:50:1.42:8,1,0	1/1:11,2:13:2.97:20,3,0	./.	1/1:28,6:33:2.43:23,2,0	0/1:25,0:25:38.10:38,0,148	1/1:20,3:24:70.72:530,71,0	1/1:8,19:27:14.49:367,14,0	0/0:5,0:5:2.92:0,3,17
chr10	90486060	.	GAC	G	853.69	PASS	AB=0.989;AC=27;AF=0.482;AN=56;BaseQRankSum=6.006;DP=762;FS=6.518;HRun=0;HaplotypeScore=247.3466;InbreedingCoeff=0.2331;MQ=36.98;MQ0=23;MQRankSum=-1.480;QD=1.76;ReadPosRankSum=1.169;VQSLOD=1.8836;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,4:44:36.84:0,37,649	1/1:15,0:15:18.71:79,19,0	0/0:44,0:10:21.07:0,21,323	0/0:57,0:19:37.31:0,37,558	1/1:12,0:12:1.41:4,1,0	0/1:28,0:28:12.68:30,0,13	0/1:29,1:30:15.18:39,0,15	0/1:27,0:25:0.44:0,0,142	1/1:21,0:21:11.53:89,12,0	0/0:37,0:36:85.02:0,85,1059	0/1:18,0:19:1.14:1,0,43	0/1:36,0:35:3.18:99,0,3	0/1:23,0:23:9.81:103,0,10	0/1:23,0:23:12.13:19,0,12	1/1:35,0:35:24.56:103,25,0	0/0:31,0:31:10.82:0,11,155	1/1:32,4:36:14.21:133,14,0	0/0:18,1:18:11.80:0,12,270	0/1:21,0:19:12.13:12,0,35	0/1:11,0:11:10.65:11,0,35	1/1:34,15:49:2.33:27,2,0	1/1:14,0:14:0.89:2,1,0	0/0:13,1:14:3:0,3,25	0/1:30,3:32:0:0,0,1	0/0:25,0:25:3.33:0,3,114	0/1:25,0:25:2.23:96,0,2	1/1:26,0:26:16.05:173,16,0	0/0:5,0:5:3.01:0,3,34
chr10	90486062	.	CACAG	C	2669.63	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=4.322;DP=761;FS=1.766;HRun=0;HaplotypeScore=242.8851;InbreedingCoeff=0.2624;MQ=37.17;MQ0=23;MQRankSum=-0.940;QD=4.79;ReadPosRankSum=-2.317;VQSLOD=2.4794;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:38.54:0,39,907	1/1:2,13:15:20.97:398,21,0	0/0:43,0:9:17.76:0,18,150	0/0:56,0:18:37.09:0,37,392	1/1:10,1:11:1.34:4,1,0	1/1:28,0:28:8.20:125,8,0	0/1:30,0:30:0.14:9,0,0	0/1:29,0:27:99:139,0,113	0/1:20,0:20:3.08:6,0,3	0/0:37,0:36:48.56:0,49,785	0/1:19,0:19:20.93:29,0,21	1/1:33,1:33:5.26:64,5,0	1/1:23,0:23:13.92:124,14,0	1/1:20,1:21:9.43:54,9,0	1/1:4,27:32:27.38:487,27,0	0/1:31,0:31:1.73:2,0,71	1/1:11,24:35:4.36:618,4,0	0/1:19,0:18:42.64:43,0,277	0/1:23,0:21:25.16:136,0,25	1/1:12,0:12:0.74:5,1,0	1/1:50,0:50:1.37:8,1,0	1/1:14,1:15:2.50:9,2,0	0/0:13,0:13:0.47:0,0,1	1/1:34,0:33:3.41:26,3,0	0/1:25,0:25:42.05:55,0,42	1/1:24,0:24:43.35:350,43,0	1/1:27,0:27:17.98:142,18,0	0/0:5,0:5:3.01:0,3,42
chr10	90486064	.	CAG	C	3540.47	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=4.639;DP=760;FS=11.597;HRun=0;HaplotypeScore=222.2950;InbreedingCoeff=0.2522;MQ=37.68;MQ0=23;MQRankSum=-0.452;QD=5.97;ReadPosRankSum=-1.416;VQSLOD=1.6063;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:41.50:0,42,716	1/1:14,0:14:20.88:160,21,0	0/0:43,0:9:17.94:0,18,150	0/0:57,0:18:30.41:0,30,294	1/1:10,0:10:1.41:4,1,0	1/1:23,3:26:14.90:139,15,0	1/1:30,0:30:8.34:104,8,0	0/1:27,0:25:63.24:216,0,63	1/1:21,0:21:11.94:167,12,0	0/1:37,0:36:55.70:56,0,526	0/1:19,0:19:7.19:82,0,7	1/1:34,1:34:18.49:222,18,0	1/1:23,2:25:24.78:288,25,0	1/1:22,0:22:15.19:119,15,0	1/1:29,1:31:26.77:201,27,0	0/1:30,0:30:24.29:24,0,46	1/1:34,0:35:1.64:233,2,0	0/1:19,0:18:63.03:63,0,131	1/1:22,0:20:2.14:229,2,0	1/1:13,0:13:8.72:92,9,0	1/1:51,0:51:3.94:31,4,0	1/1:5,11:16:2.96:19,3,0	0/0:12,0:12:0.47:0,0,1	1/1:34,0:33:3.67:26,4,0	0/1:24,0:24:43.35:66,0,43	1/1:25,0:25:73.86:567,74,0	1/1:26,1:27:39.38:431,39,0	0/0:5,0:5:2.90:0,3,16
chr10	90486287	.	CT	C	1163.22	PASS	AB=0.963;AC=7;AF=0.125;AN=56;BaseQRankSum=0.244;DP=607;FS=4.847;HRun=10;HaplotypeScore=103.8037;InbreedingCoeff=0.8310;MQ=66.83;MQ0=0;MQRankSum=2.239;QD=12.92;ReadPosRankSum=2.396;VQSLOD=3.6082;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:63.17:0,63,697	1/1:1,11:12:26.96:234,27,0	0/0:17,0:13:20.89:0,21,178	0/0:16,0:12:14.71:0,15,127	0/0:30,1:31:45.97:0,46,686	0/0:29,0:29:57.04:0,57,601	0/0:18,0:18:48.13:0,48,531	0/0:39,2:41:53.14:0,53,1020	0/0:12,0:12:30.08:0,30,332	0/0:27,1:28:45.95:0,46,697	0/0:15,0:15:35.93:0,36,365	0/0:20,0:20:51.07:0,51,542	0/0:16,0:16:35.84:0,36,398	0/0:17,0:17:38.40:0,38,389	1/1:3,26:29:65.98:573,66,0	0/0:22,1:23:34.03:0,34,582	1/1:2,21:23:56.91:486,57,0	0/0:29,0:29:78.20:0,78,853	0/1:25,1:26:18.50:18,0,251	0/0:27,0:27:69.17:0,69,748	0/0:10,0:10:24:0,24,242	0/0:11,0:11:27.06:0,27,290	0/0:23,1:24:36.99:0,37,595	0/0:13,0:13:35.99:0,36,372	0/0:26,0:26:69.08:0,69,734	0/0:33,0:33:93.22:0,93,1005	0/0:22,0:22:63.05:0,63,670	0/0:9,0:9:27.07:0,27,298
chr10	90486747	.	T	TTTAGC	23108.96	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-8.694;DP=569;FS=12.713;HRun=0;HaplotypeScore=89.7050;InbreedingCoeff=0.9938;MQ=55.13;MQ0=19;MQRankSum=-9.860;QD=70.24;ReadPosRankSum=0.983;VQSLOD=5.9168;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.29:0,90,1964	0/0:7,0:7:18.06:0,18,401	0/0:23,0:6:15.04:0,15,263	0/0:29,0:13:17.12:0,17,577	1/1:0,17:17:42.01:1121,42,0	1/1:1,20:22:54.12:1590,54,0	1/1:5,16:25:51.18:1624,51,0	1/1:2,15:20:57.20:1836,57,0	1/1:2,12:15:30.10:967,30,0	0/0:26,0:26:78.23:0,78,1637	0/0:23,0:23:63.15:0,63,1311	1/1:1,18:25:48.16:1543,48,0	1/1:5,17:21:51.18:1644,51,0	1/1:5,17:26:54.19:1713,54,0	0/0:20,0:20:60.19:0,60,1296	0/0:22,0:22:63.22:0,63,1404	0/0:17,0:17:51.12:0,51,1008	0/0:27,0:27:68.25:0,68,1410	1/1:2,11:13:39.13:1133,39,0	1/1:1,15:16:42.14:1353,42,0	1/1:1,8:11:21.07:677,21,0	1/1:4,16:22:48.16:1516,48,0	1/1:3,10:16:24.04:697,24,0	1/1:3,18:21:60.21:1911,60,0	0/0:13,0:13:33.11:0,33,736	1/1:3,15:19:51.15:1513,51,0	1/1:4,18:22:48.16:1528,48,0	1/1:3,8:11:24.08:744,24,0
chr10	90486748	.	T	TTAG	9105.81	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=16.269;DP=524;FS=11.845;HRun=0;HaplotypeScore=117.4009;InbreedingCoeff=0.9632;MQ=54.17;MQ0=19;MQRankSum=-9.257;QD=31.51;ReadPosRankSum=1.657;VQSLOD=5.0940;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.29:0,90,1646	0/0:7,0:7:18.06:0,18,335	0/0:22,0:5:0.83:0,1,189	0/0:28,0:13:29.36:0,29,481	1/1:17,0:17:42.01:486,42,0	1/1:19,0:19:54.11:664,54,0	1/1:20,0:19:51.15:642,51,0	1/1:16,0:16:48.16:621,48,0	1/1:13,0:13:30.10:388,30,0	0/0:26,0:26:78.23:0,78,1391	0/0:23,0:23:66.12:0,66,1125	1/1:19,0:19:48.16:619,48,0	1/1:21,0:20:51.17:661,51,0	1/1:18,3:22:54.01:686,54,0	0/0:20,0:20:60.19:0,60,1087	0/0:21,0:21:63.22:0,63,1172	0/0:17,0:17:51.12:0,51,854	0/0:27,0:27:56.69:0,57,1172	1/1:12,0:11:33.11:423,33,0	1/1:16,0:15:42.14:544,42,0	1/1:9,0:9:21.07:272,21,0	1/1:21,0:21:48.12:591,48,0	1/1:13,0:12:24.04:292,24,0	1/1:21,0:20:59.98:753,60,0	0/0:12,0:12:33.11:0,33,615	1/1:18,0:18:31.61:567,32,0	1/1:20,1:20:48.14:614,48,0	1/1:11,0:11:24.04:281,24,0
chr10	90486817	.	CA	C	1585.53	PASS	AB=0.794;AC=37;AF=0.661;AN=56;BaseQRankSum=2.318;DP=446;FS=2.683;HRun=16;HaplotypeScore=78.5289;InbreedingCoeff=0.2302;MQ=47.65;MQ0=7;MQRankSum=0.501;QD=4.30;ReadPosRankSum=-1.447;VQSLOD=1.1660;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:31:63:0,63,384	0/0:5,0:6:11.79:0,12,82	0/1:14,1:8:31.10:31,0,37	0/0:3,1:2:2.22:0,2,7	1/1:12,4:16:24.10:130,24,0	1/1:9,6:15:19.46:112,19,0	0/1:14,6:20:3.04:91,0,3	1/1:8,6:14:13.42:77,13,0	1/1:7,0:8:10.81:58,11,0	1/1:12,12:23:9.83:168,10,0	1/1:3,11:15:25.02:140,25,0	1/1:13,3:17:20.39:113,20,0	0/1:5,2:8:17.24:28,0,17	1/1:11,3:16:14.45:64,14,0	0/0:19,0:23:43.92:0,44,286	0/1:15,8:24:23.23:143,0,23	0/0:8,0:12:18.51:0,19,124	0/1:11,11:22:11.59:46,0,12	1/1:11,3:14:13.69:77,14,0	0/1:17,2:20:11.59:45,0,12	1/1:2,3:5:11.66:69,12,0	0/1:20,1:22:35.02:35,0,47	0/1:12,4:16:12.25:27,0,12	1/1:8,7:15:21.94:122,22,0	1/1:3,3:8:4.93:24,5,0	1/1:10,5:16:13.53:77,14,0	1/1:13,4:16:11.54:72,12,0	0/1:10,1:10:15.71:16,0,17
chr10	90488886	.	G	GA	16606.31	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=3.368;DP=776;FS=0.473;HRun=9;HaplotypeScore=155.2533;InbreedingCoeff=0.9044;MQ=63.74;MQ0=2;MQRankSum=-5.802;QD=24.03;ReadPosRankSum=-0.616;VQSLOD=2.9586;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:88.62:0,89,846	1/1:6,5:12:18.05:199,18,0	0/0:28,0:24:26.56:0,27,233	0/0:22,0:18:30.05:0,30,269	1/1:18,28:47:91.01:1142,91,0	1/1:10,16:27:65.96:685,66,0	1/1:10,14:24:42.35:601,42,0	1/1:13,12:28:39.76:610,40,0	1/1:8,25:33:87.15:928,87,0	1/1:17,19:36:72.17:779,72,0	1/1:13,24:37:55.10:805,55,0	1/1:7,16:23:37.23:609,37,0	1/1:7,17:25:65.76:657,66,0	1/1:12,9:22:56.89:573,57,0	1/1:15,28:43:99:1102,102,0	1/1:8,23:32:80.97:844,81,0	1/1:12,16:29:66.06:691,66,0	1/1:4,13:19:45.95:478,46,0	1/1:6,14:20:51.12:550,51,0	1/1:14,23:37:82.95:869,83,0	1/1:9,11:20:10.33:339,10,0	1/1:9,16:25:63.16:688,63,0	1/1:7,7:14:1.12:239,1,0	1/1:7,17:25:44.85:471,45,0	1/1:3,18:21:31.06:557,31,0	1/1:16,20:36:84.14:876,84,0	1/1:22,15:38:89.79:895,90,0	1/1:4,12:16:19.02:417,19,0
chr10	90488900	.	A	AAAC	1985.31	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.735;DP=764;FS=3.872;HRun=0;HaplotypeScore=229.1588;InbreedingCoeff=0.9817;MQ=54.35;MQ0=3;MQRankSum=-3.902;QD=23.92;ReadPosRankSum=2.585;VQSLOD=3.6547;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,105,1352	1/1:2,6:8:18.06:358,18,0	0/0:22,0:12:20.84:0,21,208	0/0:19,0:15:11.94:0,12,115	0/0:50,0:49:95.26:0,95,690	0/0:23,0:23:56.70:0,57,441	0/0:28,0:28:59.55:0,60,444	0/0:30,0:30:53.57:0,54,386	0/0:32,0:32:77.48:0,77,558	0/0:25,0:25:50.71:0,51,401	0/0:31,0:31:65.50:0,65,468	0/0:27,0:27:59.64:0,60,458	0/0:26,0:25:59.49:0,59,449	0/0:21,0:21:44.69:0,45,321	1/1:20,26:46:63.10:1087,63,0	0/0:31,0:31:62.61:0,63,464	1/1:11,18:29:18.53:681,19,0	0/0:23,0:23:41.53:0,42,291	0/0:23,0:23:59.14:0,59,428	0/0:33,0:33:32.72:0,33,234	0/0:24,0:24:38.62:0,39,268	0/0:23,0:23:47.59:0,48,345	0/0:16,0:16:35.72:0,36,253	0/0:25,0:25:40.78:0,41,311	0/0:23,0:23:43.76:0,44,319	0/0:36,0:36:77.41:0,77,588	0/0:35,0:35:89.35:0,89,642	0/0:14,0:14:41.62:0,42,296
chr10	90488916	.	AAC	A	5548.53	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=5.264;DP=770;FS=2.067;HRun=0;HaplotypeScore=199.2611;InbreedingCoeff=0.8971;MQ=52.71;MQ0=3;MQRankSum=-1.131;QD=9.14;ReadPosRankSum=-1.518;VQSLOD=4.5129;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,113,1978	0/0:8,0:8:18.04:0,18,192	0/0:19,0:10:22.20:0,22,328	0/0:14,0:10:12.97:0,13,206	1/1:45,2:46:97.44:494,97,0	1/1:20,0:20:29.72:186,30,0	1/1:25,0:25:35.15:205,35,0	1/1:31,2:32:59.01:289,59,0	1/1:34,1:35:65.37:328,65,0	1/1:23,0:23:40.44:304,40,0	1/1:29,0:29:66.52:313,67,0	1/1:27,1:28:11.24:186,11,0	1/1:28,1:28:33:210,33,0	1/1:23,2:25:51.81:227,52,0	0/0:45,0:45:96.17:0,96,1037	1/1:30,2:32:76.55:333,77,0	0/0:30,1:31:38.23:0,38,616	0/1:22,0:22:8.22:121,0,8	1/1:31,1:32:74.43:403,74,0	1/1:21,1:22:50.85:231,51,0	1/1:27,0:27:37.71:171,38,0	1/1:23,0:23:22.36:141,22,0	1/1:14,0:14:24.77:102,25,0	1/1:27,2:29:39.31:252,39,0	1/1:26,3:29:54.44:303,54,0	1/1:34,2:36:41.42:348,41,0	1/1:33,0:33:70.62:281,71,0	1/1:14,0:14:33.70:123,34,0
chr10	90488917	.	AC	A	19575.30	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=0.619;DP=763;FS=4.251;HRun=1;HaplotypeScore=135.7901;InbreedingCoeff=0.9463;MQ=52.77;MQ0=3;MQRankSum=-0.592;QD=32.41;ReadPosRankSum=-2.023;VQSLOD=4.0043;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,113,1613	0/0:7,0:7:17.84:0,18,125	0/0:20,0:10:1.16:0,1,261	0/0:12,0:9:13.82:0,14,196	1/1:9,37:45:99:1475,123,0	1/1:5,15:20:53.97:722,54,0	1/1:5,20:25:69.63:878,70,0	1/1:9,23:31:82.83:1085,83,0	1/1:7,28:35:95.89:1226,96,0	1/1:8,15:23:64.36:765,64,0	1/1:3,26:29:83.99:982,84,0	1/1:5,23:28:50.86:764,51,0	1/1:6,23:28:67.09:819,67,0	1/1:2,21:23:63.16:831,63,0	0/0:43,0:43:95.73:0,96,866	1/1:5,27:32:93.23:1183,93,0	0/0:31,0:31:40.94:0,41,529	1/1:7,15:22:30.11:532,30,0	1/1:5,27:32:95.21:1079,95,0	1/1:3,19:22:63.09:778,63,0	1/1:3,23:26:56.33:628,56,0	1/1:8,15:23:55.88:718,56,0	1/1:1,13:14:36.01:440,36,0	1/1:12,19:31:70.11:829,70,0	1/1:12,18:30:81.01:963,81,0	1/1:6,29:35:80.76:1168,81,0	1/1:3,30:33:90.18:1154,90,0	1/1:1,13:14:42.09:554,42,0
chr10	90489844	.	A	AG	7093.59	PASS	AB=0.613;AC=36;AF=0.720;AN=50;BaseQRankSum=-8.556;DP=452;FS=6.568;HRun=9;HaplotypeScore=60.8649;InbreedingCoeff=0.1754;MQ=84.55;MQ0=0;MQRankSum=-3.177;QD=18.57;ReadPosRankSum=0.305;VQSLOD=4.9125;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:56.01:0,56,474	./.	0/0:20,0:21:44.86:0,45,368	0/0:20,0:20:14.36:0,14,208	0/1:4,6:10:5:178,0,5	1/1:1,13:14:1.02:239,1,0	1/1:8,17:25:28.07:529,28,0	1/1:13,8:21:24.06:265,24,0	0/1:4,8:12:45.02:202,0,45	0/1:8,9:17:18.63:232,0,19	1/1:4,6:10:18.04:191,18,0	1/1:4,22:26:27.92:538,28,0	1/1:5,18:23:16.06:405,16,0	1/1:6,9:15:1.02:239,1,0	./.	0/1:2,17:19:0.97:447,0,1	./.	1/1:7,17:24:29.06:540,29,0	1/1:7,14:21:45.06:467,45,0	1/1:1,14:15:36.06:385,36,0	0/1:9,19:28:6.99:386,0,7	0/1:5,3:8:37.03:85,0,37	0/1:4,10:14:22.03:236,0,22	1/1:2,14:16:13.05:372,13,0	1/1:4,12:16:10.04:339,10,0	1/1:6,17:23:18.98:400,19,0	0/1:6,13:19:33.04:353,0,33	1/1:1,5:6:6.02:66,6,0
chr10	90491842	.	C	CG	3461.97	PASS	AB=1.000;AC=42;AF=0.808;AN=52;BaseQRankSum=4.533;DP=277;FS=32.069;HRun=1;HaplotypeScore=52.2456;InbreedingCoeff=0.7036;MQ=40.91;MQ0=14;MQRankSum=-4.347;QD=15.74;ReadPosRankSum=0.203;VQSLOD=1.7448;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:33.07:0,33,374	0/0:3,0:3:9:0,9,98	./.	./.	1/1:13,0:13:24:212,24,0	1/1:8,0:8:23.92:197,24,0	1/1:12,1:13:26.98:249,27,0	1/1:11,0:10:26.90:216,27,0	1/1:6,1:7:7.41:94,7,0	0/1:12,0:11:2.88:131,0,3	1/1:7,1:8:17.96:169,18,0	1/1:8,0:8:15:132,15,0	1/1:3,0:3:6:54,6,0	0/1:8,0:8:5.43:82,0,5	0/0:14,0:14:36.03:0,36,422	1/1:10,0:9:15.01:132,15,0	0/0:25,0:22:24.63:0,25,479	1/1:11,0:11:14.95:124,15,0	1/1:9,0:8:23.80:186,24,0	1/1:11,0:11:29.47:235,29,0	1/1:8,0:5:7.54:72,8,0	1/1:11,0:12:26.46:201,26,0	1/1:11,1:11:20.72:179,21,0	1/1:7,0:4:7.85:78,8,0	1/1:16,0:14:23.76:183,24,0	1/1:15,0:15:35.95:307,36,0	1/1:10,0:9:14.99:129,15,0	1/1:8,0:6:11.95:100,12,0
chr10	90491843	.	G	GGA	7535.05	PASS	AB=0.808;AC=44;AF=0.815;AN=54;BaseQRankSum=-1.865;DP=378;FS=22.789;HRun=0;HaplotypeScore=92.2614;InbreedingCoeff=0.7701;MQ=43.13;MQ0=15;MQRankSum=-3.303;QD=24.54;ReadPosRankSum=-1.295;VQSLOD=3.2213;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:33:0,33,441	0/0:7,0:7:8.98:0,9,117	0/1:1,0:1:0:0,0,0	./.	1/1:8,12:22:27.04:494,27,0	1/1:6,4:10:23.98:344,24,0	1/1:2,11:15:27.02:487,27,0	1/1:10,9:20:36.39:547,36,0	1/1:4,5:11:17.95:233,18,0	1/1:7,10:16:0.14:315,0,0	1/1:6,4:9:20.89:293,21,0	1/1:9,8:20:21.36:319,21,0	1/1:2,4:8:12:184,12,0	0/1:3,5:8:2.20:207,0,2	0/0:18,0:18:35.14:0,35,512	1/1:7,9:16:21.85:367,22,0	0/0:28,0:26:20.97:0,21,591	1/1:3,8:11:23.35:300,23,0	1/1:5,8:12:27.02:380,27,0	1/1:0,9:12:33.08:587,33,0	1/1:10,2:9:13.40:136,13,0	1/1:7,8:16:26.65:430,27,0	1/1:12,4:16:22.88:240,23,0	1/1:3,6:8:9:180,9,0	1/1:13,4:15:26.97:357,27,0	1/1:4,12:17:41.46:646,41,0	1/1:8,4:11:18.03:287,18,0	1/1:5,4:7:11.98:200,12,0
chr10	90492327	.	GA	G	4194.20	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.714;DP=672;FS=0.370;HRun=4;HaplotypeScore=64.2497;InbreedingCoeff=0.9856;MQ=82.56;MQ0=0;MQRankSum=-1.915;QD=33.82;ReadPosRankSum=1.350;VQSLOD=4.2164;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,1514	0/0:3,0:3:9.03:0,9,126	0/0:23,0:23:63.21:0,63,853	0/0:15,0:15:35.92:0,36,483	0/0:30,0:30:90.30:0,90,1259	0/0:30,0:30:84.24:0,84,1154	0/0:21,0:21:63.21:0,63,882	0/0:39,0:39:99:0,105,1453	0/0:14,0:14:42.14:0,42,586	1/1:0,22:22:63.18:744,63,0	1/1:0,15:15:42.13:504,42,0	0/0:28,0:28:84.26:0,84,1144	0/0:26,0:26:78.23:0,78,1072	0/0:16,0:16:48.16:0,48,672	0/0:35,0:35:99:0,105,1454	1/1:1,30:31:51.26:1038,51,0	0/0:30,0:30:87.29:0,87,1217	1/1:0,34:34:93.29:1116,93,0	0/0:19,0:19:54.18:0,54,755	0/0:24,0:24:66.22:0,66,924	0/0:20,0:20:57.19:0,57,798	0/0:20,0:20:60.20:0,60,840	0/0:20,0:20:51.13:0,51,692	0/0:21,0:21:57.19:0,57,798	1/1:0,22:22:66.20:792,66,0	0/0:36,0:36:96.31:0,96,1326	0/0:29,0:28:87.29:0,87,1218	0/0:8,0:8:21.07:0,21,294
chr10	90492579	.	A	AT	7354	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-4.014;DP=369;FS=21.040;HRun=9;HaplotypeScore=86.6547;InbreedingCoeff=0.7277;MQ=58.34;MQ0=1;MQRankSum=0.397;QD=23.05;ReadPosRankSum=-0.247;VQSLOD=3.4608;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:25:45.76:191,46,0	0/0:5,0:5:11.80:0,12,75	0/0:4,0:2:5.87:0,6,41	0/0:8,0:4:5.74:0,6,38	1/1:3,16:19:41.10:438,41,0	1/1:1,13:14:36.07:386,36,0	1/1:1,9:10:21.06:233,21,0	1/1:9,33:43:99:1174,108,0	1/1:2,11:13:4.03:271,4,0	1/1:5,8:13:1.02:238,1,0	1/1:2,6:7:15.03:160,15,0	1/1:1,11:12:36.10:395,36,0	1/1:1,2:3:6.02:66,6,0	1/1:0,4:4:12.03:132,12,0	0/0:9,0:9:5:0,5,26	1/1:1,7:8:18.05:199,18,0	0/0:24,0:24:6.90:0,7,23	1/1:1,17:18:42.11:464,42,0	1/1:7,13:20:48.53:503,49,0	1/1:1,8:9:24.06:265,24,0	1/1:4,6:10:12.03:133,12,0	1/1:2,7:9:15.04:166,15,0	1/1:1,3:4:6.02:66,6,0	1/1:2,3:5:9.02:100,9,0	1/1:2,15:17:45.12:497,45,0	1/1:6,17:23:51.12:553,51,0	1/1:5,17:20:32.16:390,32,0	1/1:0,10:10:30.08:332,30,0
chr10	90492580	.	TTTTTTTTTGTTATTTATTTA	T	2028.67	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=7.059;DP=366;FS=10.343;HRun=0;HaplotypeScore=223.5158;InbreedingCoeff=0.0999;MQ=58.28;MQ0=1;MQRankSum=-7.998;QD=11.27;ReadPosRankSum=-0.525;VQSLOD=0.7208;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:60.18:0,60,2824	1/1:5,0:5:12.04:236,12,0	0/1:4,0:2:0.04:0,0,87	0/0:8,0:4:5.91:0,6,56	0/1:19,0:19:99:198,0,442	0/1:14,0:14:99:190,0,541	0/0:10,0:10:20.91:0,21,357	0/0:43,0:43:99:0,123,2563	0/1:13,0:13:99:156,0,424	0/1:13,0:13:72.25:72,0,534	0/0:9,0:8:18.05:0,18,349	0/1:12,0:12:58.20:58,0,683	0/0:3,0:3:6.02:0,6,140	0/0:4,0:4:12.04:0,12,238	1/1:0,9:9:6.02:290,6,0	0/1:8,0:8:16.64:17,0,355	1/1:1,22:23:12.04:426,12,0	0/0:18,0:18:45.11:0,45,1004	0/0:20,0:20:57.17:0,57,1126	0/0:9,0:9:11.25:0,11,489	0/0:10,0:10:20.99:0,21,288	0/0:8,0:8:21.07:0,21,430	0/0:4,0:4:9.92:0,10,189	0/0:5,0:5:12.03:0,12,230	0/1:17,0:17:0.64:1,0,948	0/1:22,0:22:99:223,0,835	0/1:21,0:19:99:325,0,580	0/0:10,0:10:30.10:0,30,596
chr10	90492588	.	TG	T	305.64	PASS	AB=0.971;AC=13;AF=0.232;AN=56;BaseQRankSum=5.380;DP=322;FS=3.327;HRun=1;HaplotypeScore=99.9030;InbreedingCoeff=0.3108;MQ=57.66;MQ0=5;MQRankSum=-2.306;QD=2.41;ReadPosRankSum=0.900;VQSLOD=-0.4792;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,13:23:5.82:330,6,0	1/1:4,0:4:5.95:18,6,0	0/0:4,0:2:3.48:0,3,42	0/1:5,1:3:8.93:9,0,34	0/0:17,0:17:37.83:0,38,218	0/0:13,0:13:19.30:0,19,160	0/0:7,0:7:20.47:0,20,120	0/0:39,0:38:94.62:0,95,630	0/0:10,0:10:5.79:0,6,138	0/1:9,0:9:10.44:10,0,86	0/0:8,0:7:13.75:0,14,76	0/0:12,0:12:21.61:0,22,172	0/0:2,0:2:5.85:0,6,35	0/0:4,0:4:11.70:0,12,69	1/1:9,0:9:2.47:9,2,0	0/0:7,0:7:5.97:0,6,76	1/1:22,0:22:8.04:35,8,0	0/0:17,0:17:39.55:0,40,227	0/1:18,0:18:26.25:26,0,241	0/0:8,0:8:23.40:0,23,139	0/0:6,0:6:11.70:0,12,69	0/0:7,0:7:14.59:0,15,87	0/0:3,0:3:5.48:0,5,34	0/0:3,0:3:8.77:0,9,52	0/0:16,0:15:30.90:0,31,226	0/1:19,0:19:5.56:6,0,191	0/1:17,0:15:8.97:9,0,118	0/0:12,0:10:29.24:0,29,173
chr10	90492591	.	TA	T	179.52	PASS	AB=0.829;AC=2;AF=0.036;AN=56;BaseQRankSum=5.498;DP=299;FS=3.476;HRun=1;HaplotypeScore=96.6059;InbreedingCoeff=-0.0614;MQ=55.27;MQ0=5;MQRankSum=-1.260;QD=5.61;ReadPosRankSum=3.179;VQSLOD=0.8578;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,12:23:27.14:253,0,27	0/0:4,0:4:11.92:0,12,95	0/0:4,0:2:5.61:0,6,55	0/0:5,0:2:3:0,3,27	0/0:16,0:16:36.07:0,36,409	0/0:12,0:12:31.83:0,32,327	0/0:7,0:7:21.04:0,21,213	0/0:37,0:36:99:0,100,1146	0/0:10,0:10:21.54:0,22,258	0/0:8,0:8:14.48:0,14,179	0/0:7,0:6:12.01:0,12,122	0/0:11,0:11:27.88:0,28,313	0/0:2,0:2:6:0,6,58	0/0:4,0:4:12.02:0,12,127	0/1:9,0:9:1.74:2,0,22	0/0:6,0:6:13.98:0,14,167	0/0:22,0:22:1.18:0,1,32	0/0:15,0:15:36.17:0,36,353	0/0:15,0:15:45.06:0,45,502	0/0:8,0:8:24.04:0,24,249	0/0:4,0:4:12.01:0,12,118	0/0:5,0:5:15.03:0,15,157	0/0:2,0:2:6.02:0,6,66	0/0:3,0:3:9.01:0,9,91	0/0:16,0:15:39.86:0,40,442	0/0:17,0:17:36.47:0,36,425	0/0:15,0:13:21.62:0,22,232	0/0:12,0:10:30.05:0,30,313
chr10	90492618	.	TTATTTATTTATTTATTTATG	T	8325.74	PASS	AB=0.982;AC=37;AF=0.740;AN=50;BaseQRankSum=-1.846;DP=235;FS=3.202;HRun=0;HaplotypeScore=147.4701;InbreedingCoeff=0.1472;MQ=45.87;MQ0=7;MQRankSum=-1.780;QD=40.03;ReadPosRankSum=-0.880;VQSLOD=4.1964;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.13:0,48,2685	0/0:2,0:2:3.01:0,3,72	./.	0/0:5,0:2:5.91:0,6,50	1/1:5,9:14:33.11:978,33,0	1/1:10,2:11:33.06:1130,33,0	1/1:5,0:5:9.03:165,9,0	1/1:24,0:23:48.06:608,48,0	1/1:4,2:6:18.06:572,18,0	0/1:11,0:11:94.90:247,0,95	0/1:6,1:6:9.32:52,0,9	1/1:4,1:5:9.03:297,9,0	./.	1/1:5,0:5:11.94:170,12,0	0/1:5,0:5:90.49:139,0,90	0/1:6,0:6:3.59:212,0,4	0/1:30,0:29:58.75:59,0,384	0/1:13,0:13:69.45:91,0,69	1/1:8,0:8:18.01:308,18,0	1/1:2,0:2:6.02:112,6,0	1/1:4,0:4:9.03:250,9,0	./.	1/1:2,0:2:6.01:127,6,0	1/1:1,0:1:3.01:77,3,0	0/1:11,0:10:52.10:192,0,52	1/1:10,3:13:36.12:1172,36,0	1/1:10,4:13:30.05:971,30,0	1/1:10,0:8:24.06:397,24,0
chr10	90492622	.	TTATTTATTTATTTATG	T	6414.66	PASS	AB=1.000;AC=44;AF=0.815;AN=54;BaseQRankSum=0.765;DP=224;FS=0.709;HRun=0;HaplotypeScore=120.7396;InbreedingCoeff=0.4887;MQ=47.08;MQ0=4;MQRankSum=-0.662;QD=32.73;ReadPosRankSum=-2.306;VQSLOD=3.0181;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.12:0,51,2022	0/0:1,0:1:3.01:0,3,54	0/0:5,0:1:3.01:0,3,33	0/0:5,0:2:5.91:0,6,50	1/1:12,0:12:30.43:495,30,0	1/1:14,0:13:42:702,42,0	1/1:5,0:5:7.46:29,7,0	1/1:23,0:22:59.63:480,60,0	1/1:6,0:6:16.07:299,16,0	1/1:6,3:9:24.07:676,24,0	1/1:2,6:7:17.89:184,18,0	1/1:4,0:4:11.05:183,11,0	./.	1/1:4,0:4:11.94:138,12,0	0/1:5,0:5:64.64:104,0,65	1/1:6,1:7:21.03:306,21,0	0/1:31,0:30:38.53:39,0,330	1/1:8,2:10:27.03:506,27,0	1/1:6,0:6:15.60:118,16,0	1/1:3,0:3:9.01:87,9,0	1/1:4,0:4:8.67:99,9,0	1/1:1,0:1:3:27,3,0	1/1:2,0:2:6.01:83,6,0	1/1:1,0:1:2.99:23,3,0	1/1:6,2:8:19.29:432,19,0	1/1:13,0:13:38.07:619,38,0	1/1:12,0:11:32.88:662,33,0	1/1:8,0:8:16.94:125,17,0
chr10	90494030	.	CGGGG	C	6619.78	PASS	AB=0.684;AC=39;AF=0.696;AN=56;BaseQRankSum=-6.061;DP=420;FS=0.754;HRun=13;HaplotypeScore=86.3688;InbreedingCoeff=0.6388;MQ=72.01;MQ0=0;MQRankSum=-1.378;QD=20.62;ReadPosRankSum=5.625;VQSLOD=3.3129;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:26:11.52:0,12,73	0/0:2,0:3:2.92:0,3,17	0/0:15,0:12:21.26:0,21,275	0/0:17,0:12:13.81:0,14,195	0/1:6,3:9:0:0,0,0	1/1:3,10:15:20.80:276,21,0	1/1:6,21:29:54.09:750,54,0	1/1:10,1:11:3.37:45,3,0	1/1:5,9:15:21.03:287,21,0	1/1:5,6:11:14.97:205,15,0	0/0:4,5:9:0.89:0,1,2	1/1:8,10:19:26.76:374,27,0	1/1:8,6:15:15.49:212,15,0	1/1:3,7:11:21.05:307,21,0	0/0:5,0:13:8.44:0,8,51	1/1:4,10:14:30.06:439,30,0	0/0:6,0:14:17.58:0,18,104	1/1:5,28:33:68.97:1009,69,0	1/1:1,13:14:29.99:412,30,0	1/1:4,3:7:5.99:87,6,0	1/1:8,17:25:23.69:324,24,0	1/1:5,7:12:2.74:43,3,0	0/1:3,5:8:14.90:37,0,15	1/1:4,20:24:57.08:806,57,0	0/1:6,5:11:19.58:39,0,20	1/1:3,8:12:24.06:325,24,0	1/1:7,12:18:29.99:432,30,0	1/1:2,5:7:15.05:212,15,0
chr10	90494040	.	GGGGT	G	2925.42	PASS	AB=0.930;AC=23;AF=0.411;AN=56;BaseQRankSum=8.814;DP=423;FS=0.435;HRun=0;HaplotypeScore=99.1717;InbreedingCoeff=0.0110;MQ=73.35;MQ0=1;MQRankSum=-2.808;QD=10.45;ReadPosRankSum=13.261;VQSLOD=-0.4219;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:20.27:0,20,161	0/0:5,0:5:9.87:0,10,76	0/0:19,0:14:9.29:0,9,347	0/0:17,0:11:17.64:0,18,268	0/0:5,2:7:8.94:0,9,68	0/1:17,0:17:92.77:93,0,93	1/1:25,0:25:15.35:362,15,0	0/0:13,2:15:14.60:0,15,297	1/1:10,2:12:17.93:171,18,0	0/1:10,0:10:47.96:77,0,48	0/0:6,1:7:3.45:0,3,23	0/1:19,4:23:84.30:160,0,84	0/1:12,2:14:97.25:116,0,97	1/1:9,2:11:8.98:198,9,0	0/0:16,0:16:32.70:0,33,387	1/1:11,1:12:8.78:203,9,0	0/0:15,0:15:29.97:0,30,250	1/1:29,1:30:47.31:507,47,0	0/1:16,0:16:53.19:185,0,53	0/1:6,0:6:28.45:28,0,91	0/1:23,2:25:87.06:126,0,87	0/0:14,0:14:1.98:0,2,121	0/1:8,1:9:31.80:32,0,61	0/1:25,2:27:59.20:367,0,59	0/1:8,2:10:18.03:18,0,49	0/1:10,0:10:2.34:124,0,2	0/1:13,2:15:3.10:246,0,3	0/1:7,1:8:26.99:88,0,27
chr10	90495081	.	ACTTT	A	1366.14	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.305;DP=657;FS=10.604;HRun=0;HaplotypeScore=108.5461;InbreedingCoeff=0.9071;MQ=79.60;MQ0=0;MQRankSum=-3.931;QD=39.03;ReadPosRankSum=2.476;VQSLOD=3.4197;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:84.24:1461,84,0	0/0:3,0:3:9.03:0,9,234	0/0:28,0:27:55.80:0,56,1088	0/0:17,0:17:10.35:0,10,775	0/0:21,0:21:60.20:0,60,1496	0/0:18,0:18:51.18:0,51,1325	0/0:32,0:32:84.27:0,84,2101	0/0:27,0:27:63.21:0,63,1519	0/0:22,0:22:57.18:0,57,1428	0/0:21,0:21:57.20:0,57,1481	0/0:12,0:12:36.12:0,36,933	0/0:20,0:20:57.20:0,57,1480	0/0:18,0:18:48.16:0,48,1247	0/0:22,0:22:60.20:0,60,1478	0/0:42,0:42:99:0,111,2807	0/0:22,0:22:60.21:0,60,1503	0/0:40,0:40:99:0,114,2807	0/0:21,0:21:60.18:0,60,1434	0/0:22,0:22:65.80:0,66,1579	0/0:23,0:23:63.20:0,63,1582	0/0:29,0:29:78.23:0,78,1809	0/0:18,0:18:51.14:0,51,1164	0/0:15,0:15:39.11:0,39,909	0/0:41,0:41:99:0,120,2972	0/0:20,0:20:57.19:0,57,1428	0/0:18,0:18:54.19:0,54,1359	0/0:37,0:37:99:0,99,2341	0/0:13,0:13:39.13:0,39,1013
chr10	90495589	.	GA	G	1167.02	PASS	AB=0.852;AC=43;AF=0.768;AN=56;BaseQRankSum=-1.051;DP=355;FS=1.412;HRun=14;HaplotypeScore=58.2544;InbreedingCoeff=-0.0089;MQ=43.89;MQ0=40;MQRankSum=-0.538;QD=3.79;ReadPosRankSum=1.071;VQSLOD=0.2170;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,5:11:14.73:97,15,0	0/1:5,1:6:13.71:14,0,14	0/1:34,0:5:5.38:5,0,17	0/0:30,0:4:6.22:0,6,25	1/1:10,2:11:2.93:20,3,0	1/1:2,3:5:2.96:20,3,0	1/1:11,3:12:5.71:30,6,0	1/1:3,3:20:18.03:113,18,0	1/1:4,5:9:8.88:60,9,0	0/1:3,2:14:14.25:63,0,14	1/1:7,3:9:5.92:41,6,0	1/1:6,2:4:7.19:44,7,0	1/1:5,1:4:2.96:20,3,0	1/1:4,3:6:2.96:20,3,0	1/1:10,5:15:28.28:174,28,0	0/1:13,2:14:14.06:46,0,14	0/1:21,2:22:11.94:58,0,12	1/1:10,2:9:8.57:60,9,0	1/1:7,0:6:2.94:21,3,0	0/1:6,3:8:8.67:65,0,9	0/1:3,0:3:13.16:13,0,16	1/1:8,1:8:2.74:12,3,0	1/1:9,3:12:1.81:72,2,0	1/1:5,1:5:5.84:41,6,0	0/0:4,4:7:0:0,0,0	1/1:1,2:17:7.19:74,7,0	0/0:8,1:9:0:0,0,0	1/1:12,2:11:17.45:113,17,0
chr10	90495618	.	AAG	A	3447.02	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-3.164;DP=451;FS=0.000;HRun=0;HaplotypeScore=54.8291;InbreedingCoeff=0.2926;MQ=42.89;MQ0=47;MQRankSum=0.289;QD=7.64;ReadPosRankSum=1.207;VQSLOD=2.9463;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:45.02:298,45,0	1/1:2,0:2:5.94:42,6,0	0/1:29,0:5:0.25:0,0,3	0/1:45,0:7:1.64:2,0,2	1/1:15,0:14:13.38:81,13,0	1/1:8,0:8:7.66:45,8,0	1/1:16,0:14:19.68:105,20,0	1/1:27,0:25:56.68:400,57,0	1/1:10,0:10:26.18:179,26,0	1/1:16,0:15:25.01:144,25,0	1/1:8,0:7:8.90:60,9,0	1/1:14,0:12:29.67:194,30,0	1/1:6,0:5:9.34:58,9,0	1/1:11,0:11:29.62:202,30,0	1/1:17,0:16:27.97:191,28,0	1/1:13,0:11:26.46:167,26,0	0/1:36,0:32:6.33:6,0,48	1/1:24,0:22:28.30:213,28,0	1/1:10,0:6:10.65:68,11,0	1/1:12,0:12:24.04:158,24,0	1/1:3,0:2:5.93:40,6,0	1/1:14,0:12:9.06:50,9,0	1/1:14,0:12:13.68:104,14,0	1/1:8,0:7:11.95:74,12,0	1/1:18,0:17:33.77:196,34,0	1/1:22,0:20:36.16:199,36,0	1/1:2,13:14:2.79:31,3,0	1/1:17,0:11:21.43:139,21,0
chr10	90495619	.	AG	A	3971.84	PASS	AB=0.757;AC=52;AF=0.929;AN=56;BaseQRankSum=-3.122;DP=435;FS=1.419;HRun=1;HaplotypeScore=45.4953;InbreedingCoeff=0.3285;MQ=43.64;MQ0=46;MQRankSum=-1.149;QD=9.73;ReadPosRankSum=1.805;VQSLOD=1.3526;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:48.14:321,48,0	1/1:2,0:2:5.94:42,6,0	0/0:23,4:5:0.83:0,1,7	0/1:42,2:7:0.67:3,0,1	1/1:3,12:14:14.79:97,15,0	1/1:8,0:8:10.18:56,10,0	1/1:14,0:12:20.02:116,20,0	1/1:27,0:25:57.55:429,58,0	1/1:10,0:10:26.81:198,27,0	1/1:14,0:13:25.48:160,25,0	1/1:3,5:7:8.90:60,9,0	1/1:14,0:12:31.25:217,31,0	1/1:6,0:5:10.42:62,10,0	1/1:11,0:11:29.69:207,30,0	1/1:16,0:15:27.98:192,28,0	1/1:13,0:11:32.33:220,32,0	0/1:7,27:30:5.80:6,0,48	1/1:23,1:22:39.49:281,39,0	1/1:9,0:6:13.72:82,14,0	1/1:12,0:12:27.92:187,28,0	1/1:3,0:2:5.93:40,6,0	1/1:4,9:11:7.74:44,8,0	1/1:13,0:11:14.88:120,15,0	1/1:8,0:7:13.86:82,14,0	1/1:19,0:18:42.26:280,42,0	1/1:20,0:18:41.38:280,41,0	1/1:15,0:14:2.96:20,3,0	1/1:15,0:9:25.85:171,26,0
chr10	90495763	.	T	TGACA	30753.23	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.055;DP=517;FS=47.959;HRun=0;HaplotypeScore=72.6777;InbreedingCoeff=0.9362;MQ=67.67;MQ0=0;MQRankSum=-7.367;QD=62.00;ReadPosRankSum=3.181;VQSLOD=3.1439;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,27:33:75.26:1961,75,0	1/1:0,4:5:15.05:396,15,0	0/0:7,0:7:21.07:0,21,362	0/0:14,0:13:36.12:0,36,651	1/1:1,8:9:21.07:533,21,0	1/1:3,12:15:39.13:1028,39,0	1/1:4,20:23:60.21:1591,60,0	1/1:6,28:37:99:2396,102,0	1/1:2,21:23:44.66:1198,45,0	1/1:3,7:7:18.06:475,18,0	1/1:1,7:8:18.06:455,18,0	1/1:3,15:18:38.99:1036,39,0	1/1:0,17:17:45.15:1197,45,0	1/1:2,19:21:60.19:1528,60,0	1/1:1,27:28:75.26:1987,75,0	1/1:5,18:24:63.22:1657,63,0	1/1:3,24:29:66.23:1759,66,0	1/1:2,16:18:45.15:1185,45,0	1/1:5,14:20:45.59:1065,46,0	1/1:1,8:9:21.07:533,21,0	1/1:5,42:47:99:2840,108,0	1/1:2,5:6:9.03:240,9,0	1/1:0,6:6:18.06:455,18,0	1/1:5,25:31:69.24:1830,69,0	1/1:1,7:9:15.05:399,15,0	1/1:2,12:13:39.13:1009,39,0	1/1:6,15:20:57.20:1441,57,0	1/1:4,6:10:21.07:559,21,0
chr10	90497511	.	CAG	C	1222.74	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.905;DP=567;FS=1.575;HRun=0;HaplotypeScore=67.3353;InbreedingCoeff=0.9961;MQ=86.48;MQ0=1;MQRankSum=-4.292;QD=37.05;ReadPosRankSum=2.076;VQSLOD=5.4146;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:32:81.28:1318,81,0	0/0:8,0:8:24.08:0,24,487	0/0:24,0:24:72.22:0,72,1356	0/0:28,0:27:76.43:0,76,1390	0/0:11,0:11:33.11:0,33,654	0/0:25,0:25:75.24:0,75,1487	0/0:22,0:22:66.23:0,66,1340	0/0:31,0:31:93.30:0,93,1792	0/0:18,0:18:54.19:0,54,1080	0/0:24,0:24:72.25:0,72,1449	0/0:14,0:14:42.12:0,42,781	0/0:28,0:28:84.29:0,84,1706	0/0:12,0:12:36.12:0,36,731	0/0:24,0:24:72.25:0,72,1437	0/0:23,0:23:69.24:0,69,1391	0/0:26,0:26:78.21:0,78,1410	0/0:22,0:22:66.23:0,66,1321	0/0:18,0:18:54.19:0,54,1096	0/0:14,0:14:42.13:0,42,817	0/0:18,0:18:54.16:0,54,1010	0/0:32,0:32:96.26:0,96,1785	0/0:17,0:17:51.15:0,51,949	0/0:12,0:12:33.10:0,33,634	0/0:12,0:12:36.09:0,36,645	0/0:9,0:9:27.08:0,27,504	0/0:25,0:25:72.24:0,72,1429	0/0:24,0:24:72.19:0,72,1378	0/0:13,0:13:39.13:0,39,791
chr10	90499020	.	T	TC	17207.33	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=-16.116;DP=707;FS=0.349;HRun=5;HaplotypeScore=75.6012;InbreedingCoeff=0.7460;MQ=76.95;MQ0=0;MQRankSum=-6.156;QD=28.73;ReadPosRankSum=0.961;VQSLOD=5.1495;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,32:38:79.88:1075,80,0	0/1:8,0:8:7.12:7,0,63	0/0:30,0:30:76.12:0,76,737	0/0:20,0:21:30.04:0,30,420	1/1:4,29:33:84.18:1047,84,0	1/1:0,31:31:84.27:1086,84,0	1/1:4,22:26:54.17:695,54,0	1/1:4,27:31:81.06:902,81,0	1/1:0,28:28:75.18:945,75,0	1/1:2,25:27:81.18:991,81,0	1/1:0,14:14:38.85:435,39,0	1/1:2,23:25:54.18:696,54,0	1/1:2,20:22:45.15:579,45,0	1/1:0,17:17:39.13:502,39,0	0/1:41,0:41:11.35:11,0,137	1/1:0,26:26:72.23:928,72,0	0/0:56,0:56:54:0,54,213	1/1:2,23:25:51.17:659,51,0	1/1:2,12:14:39.07:454,39,0	1/1:2,22:24:63.12:775,63,0	1/1:1,18:19:51.17:659,51,0	1/1:1,21:22:51.17:656,51,0	1/1:2,18:20:41.97:542,42,0	1/1:0,24:24:60.19:772,60,0	1/1:1,30:31:81.26:1047,81,0	1/1:1,20:21:60.20:776,60,0	1/1:1,21:22:57.19:736,57,0	1/1:2,8:10:18.06:232,18,0
chr10	90499760	.	G	GT	4264.01	PASS	AB=1.000;AC=48;AF=0.889;AN=54;BaseQRankSum=3.629;DP=337;FS=17.189;HRun=2;HaplotypeScore=94.9744;InbreedingCoeff=0.4765;MQ=80.81;MQ0=10;MQRankSum=-5.939;QD=15.07;ReadPosRankSum=1.415;VQSLOD=3.4814;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:8.94:65,9,0	./.	0/1:40,0:16:4.65:5,0,141	0/0:44,0:18:6.59:0,7,75	1/1:5,3:8:11.93:92,12,0	1/1:1,8:9:23.62:160,24,0	1/1:10,8:18:52.98:380,53,0	1/1:11,4:15:35.85:302,36,0	1/1:4,3:7:20.86:163,21,0	1/1:2,4:6:17.97:165,18,0	1/1:1,2:3:5.91:38,6,0	1/1:7,12:19:55.21:363,55,0	1/1:3,5:8:17.25:132,17,0	1/1:8,8:16:42.86:318,43,0	0/1:4,0:4:9.89:10,0,19	1/1:5,3:8:23.80:192,24,0	0/0:6,0:6:1.24:0,1,79	1/1:7,5:12:30.39:270,30,0	1/1:7,1:8:20.92:172,21,0	1/1:9,2:11:14.84:103,15,0	1/1:9,8:17:18.89:160,19,0	1/1:6,10:16:34.25:216,34,0	1/1:5,5:10:21.86:151,22,0	1/1:6,9:15:29.53:219,30,0	1/1:3,4:7:17.81:135,18,0	1/1:8,3:11:32.80:263,33,0	1/1:5,3:8:17.87:131,18,0	1/1:1,1:2:6.01:57,6,0
chr10	90499762	.	TCCC	T	780.22	PASS	AB=0.970;AC=26;AF=0.481;AN=54;BaseQRankSum=2.160;DP=367;FS=17.841;HRun=10;HaplotypeScore=116.6152;InbreedingCoeff=-0.1232;MQ=75.31;MQ0=12;MQRankSum=-3.869;QD=3.32;ReadPosRankSum=3.588;VQSLOD=-0.6638;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:2.77:0,3,50	./.	0/0:43,0:15:27:0,27,307	0/0:48,0:18:12.11:0,12,187	0/0:9,1:10:0:0,0,0	1/1:8,0:8:19.87:82,20,0	0/1:18,2:20:10:112,0,10	0/1:16,0:16:4.88:39,0,5	1/1:5,2:7:5.92:77,6,0	0/1:7,0:7:3:3,0,41	0/0:4,0:4:5.50:0,6,43	0/1:22,1:23:66.08:66,0,95	0/1:9,0:9:15.25:24,0,15	0/1:16,2:18:54.56:55,0,58	0/0:3,0:6:3.01:0,3,44	1/1:9,0:9:4.72:44,5,0	0/0:7,0:7:11.53:0,12,155	0/1:13,1:14:59.36:59,0,126	1/1:5,2:7:5.90:53,6,0	1/1:6,5:11:8.84:76,9,0	0/1:16,0:16:28.40:28,0,41	1/1:15,0:15:4.53:64,5,0	0/1:9,0:10:2.47:28,0,2	0/1:12,2:15:15.47:34,0,15	0/1:9,0:9:19.17:19,0,40	0/1:11,0:11:31.28:32,0,31	0/1:8,0:8:17.60:29,0,18	0/1:2,0:2:11.52:12,0,12
chr10	90499767	.	C	CCG	3100.29	PASS	AB=0.772;AC=36;AF=0.667;AN=54;BaseQRankSum=6.884;DP=387;FS=13.604;HRun=0;HaplotypeScore=115.3278;InbreedingCoeff=0.2178;MQ=70.03;MQ0=15;MQRankSum=-6.488;QD=10.13;ReadPosRankSum=7.571;VQSLOD=1.9012;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:10:0,10,60	./.	0/0:52,0:16:35.33:0,35,300	0/1:58,0:18:6.01:6,0,134	0/0:7,3:9:2.90:0,3,16	1/1:2,8:10:26.93:232,27,0	0/1:15,9:23:3.81:339,0,4	0/1:12,5:17:8.39:138,0,8	1/1:2,3:5:14.51:124,15,0	1/1:4,4:8:12.02:135,12,0	1/1:2,3:5:5.85:52,6,0	1/1:8,13:22:45.32:386,45,0	1/1:2,6:9:23.77:222,24,0	1/1:9,9:19:9.12:268,9,0	0/0:6,0:6:2.59:0,3,10	1/1:6,3:9:0.77:95,1,0	0/0:6,0:6:12.91:0,13,96	1/1:7,5:12:9.70:241,10,0	0/1:6,1:7:6.70:43,0,7	0/1:8,2:11:6.24:36,0,6	1/1:8,10:18:17.72:188,18,0	1/1:6,11:17:13.75:145,14,0	0/1:5,6:11:23.45:23,0,26	1/1:3,10:13:26.06:247,26,0	0/1:6,4:10:22.89:65,0,23	1/1:3,5:8:0.81:149,1,0	0/1:4,3:7:6.60:89,0,7	1/1:2,1:3:3.88:40,4,0
chr10	90499777	.	C	CT	2437.92	PASS	AB=0.615;AC=41;AF=0.788;AN=52;BaseQRankSum=2.892;DP=341;FS=0.000;HRun=0;HaplotypeScore=99.1675;InbreedingCoeff=0.6031;MQ=71.24;MQ0=16;MQRankSum=-3.767;QD=12.83;ReadPosRankSum=5.098;VQSLOD=4.6131;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:11.86:0,12,89	./.	0/0:59,0:18:23.85:0,24,187	0/0:62,0:16:13.15:0,13,165	./.	1/1:1,11:12:35.29:252,35,0	1/1:3,18:20:50:393,50,0	1/1:5,3:8:6.45:73,6,0	1/1:2,2:4:5.94:48,6,0	1/1:3,5:8:13.82:86,14,0	1/1:2,4:6:5.80:42,6,0	1/1:4,18:22:39.75:315,40,0	1/1:0,9:9:24.80:176,25,0	1/1:2,11:13:25.14:188,25,0	0/0:7,0:7:6.48:0,6,64	1/1:1,4:5:2.76:99,3,0	0/0:7,0:7:8.68:0,9,75	0/1:3,5:8:11.32:90,0,11	1/1:2,3:5:7.75:88,8,0	1/1:1,3:4:2.86:17,3,0	1/1:1,12:13:15.88:128,16,0	1/1:2,15:17:7.45:55,7,0	1/1:0,5:5:3.46:30,3,0	1/1:2,8:10:15.67:118,16,0	1/1:2,4:6:5.95:114,6,0	1/1:0,7:7:20.62:143,21,0	1/1:1,5:6:17.77:126,18,0	1/1:0,1:1:2.97:20,3,0
chr10	90500069	.	CT	C	2398.43	PASS	AB=0.984;AC=43;AF=0.768;AN=56;BaseQRankSum=-0.399;DP=476;FS=19.601;HRun=5;HaplotypeScore=99.8955;InbreedingCoeff=0.0555;MQ=61.64;MQ0=14;MQRankSum=1.994;QD=6.00;ReadPosRankSum=3.841;VQSLOD=-0.1691;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:12.83:35,0,13	1/1:2,0:2:3.07:11,3,0	0/0:30,0:6:14.54:0,15,177	0/0:46,0:20:18.64:0,19,231	1/1:23,0:23:34.79:198,35,0	0/1:14,0:14:11.14:26,0,11	0/1:21,1:23:14.33:57,0,14	1/1:44,0:44:48.74:379,49,0	1/1:8,0:8:4.64:43,5,0	1/1:19,0:19:11.54:186,12,0	0/1:9,0:10:15.52:56,0,16	1/1:14,0:14:13.08:118,13,0	1/1:4,1:5:7.31:47,7,0	0/1:6,0:6:6.84:22,0,7	1/1:18,0:18:5.61:51,6,0	0/1:10,0:10:24.63:63,0,25	0/1:25,0:25:29.94:80,0,30	0/1:19,0:18:35.70:60,0,36	1/1:20,0:20:25.27:188,25,0	1/1:13,1:13:24.34:143,24,0	1/1:9,0:9:18.15:125,18,0	1/1:11,0:11:19.78:84,20,0	1/1:9,2:10:9.55:118,10,0	1/1:13,3:15:10.12:180,10,0	1/1:1,0:1:2.94:18,3,0	1/1:19,1:19:26.51:126,27,0	0/1:16,2:16:1.24:78,0,1	1/1:14,0:13:18.19:66,18,0
chr10	90500070	.	T	TTG	4349.38	PASS	AB=0.990;AC=35;AF=0.625;AN=56;BaseQRankSum=-4.128;DP=480;FS=27.425;HRun=0;HaplotypeScore=105.1315;InbreedingCoeff=0.0865;MQ=61.59;MQ0=14;MQRankSum=1.821;QD=12.05;ReadPosRankSum=2.397;VQSLOD=2.6034;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:13.54:155,0,14	0/0:2,0:2:5.96:0,6,50	0/0:30,0:6:14.94:0,15,199	0/0:46,0:20:16.35:0,16,256	1/1:23,0:23:52.38:447,52,0	0/1:15,1:15:30.62:167,0,31	0/1:23,0:23:30.85:124,0,31	1/1:44,1:44:42.89:560,43,0	0/1:11,0:11:6.30:88,0,6	0/1:18,0:18:4.68:219,0,5	1/1:10,0:10:0.82:115,1,0	1/1:14,0:14:0.45:157,0,0	0/1:5,0:5:0.61:28,0,1	0/1:6,0:6:14.29:14,0,23	0/0:17,0:17:17.96:0,18,146	0/1:10,0:10:28.50:49,0,29	0/0:24,0:24:55.78:0,56,446	0/1:18,0:17:66.37:147,0,66	1/1:21,1:22:4.10:343,4,0	1/1:14,0:13:26.55:230,27,0	1/1:10,0:10:4.32:231,4,0	1/1:10,1:11:23.66:238,24,0	1/1:11,0:10:9.43:107,9,0	0/1:16,0:15:11.35:130,0,11	1/1:1,0:1:3.01:41,3,0	1/1:17,2:18:24.39:416,24,0	0/1:17,1:16:38.71:70,0,39	1/1:13,1:13:24.06:273,24,0
chr10	90500071	.	T	TG	4927.20	PASS	AB=0.800;AC=37;AF=0.661;AN=56;BaseQRankSum=-5.158;DP=481;FS=14.399;HRun=0;HaplotypeScore=96.6651;InbreedingCoeff=0.0232;MQ=60.43;MQ0=14;MQRankSum=2.470;QD=12.02;ReadPosRankSum=3.115;VQSLOD=5.1245;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,18:26:19.24:247,0,19	0/0:1,0:2:5.80:0,6,41	0/0:31,0:6:14.54:0,15,177	0/1:45,0:19:18.17:18,0,218	1/1:18,6:24:57.99:560,58,0	0/1:6,9:14:36.66:170,0,37	0/1:5,19:24:25.89:237,0,26	1/1:37,8:44:8.19:635,8,0	1/1:11,0:11:13.72:130,14,0	0/1:6,11:18:38.81:184,0,39	0/1:9,0:9:17.67:100,0,18	1/1:14,0:14:5.53:182,6,0	0/1:6,0:6:13.80:30,0,14	0/1:5,1:6:27.19:27,0,44	0/0:14,0:15:19.65:0,20,138	0/1:10,0:10:21:63,0,21	0/0:23,0:23:50.10:0,50,444	0/1:17,0:16:70.81:85,0,71	1/1:9,14:25:5.28:420,5,0	1/1:2,11:12:28.55:269,29,0	1/1:9,1:10:7.04:159,7,0	1/1:1,10:11:23.76:249,24,0	1/1:11,0:10:17.47:107,17,0	1/1:16,0:15:3.88:170,4,0	1/1:1,0:1:3.01:41,3,0	1/1:18,3:20:24.81:372,25,0	0/1:6,12:16:27.93:148,0,28	1/1:2,12:13:23.87:326,24,0
chr10	90500072	.	TC	T	6420.25	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.885;DP=485;FS=5.284;HRun=1;HaplotypeScore=91.2138;InbreedingCoeff=0.8210;MQ=61.27;MQ0=14;MQRankSum=-2.311;QD=15.74;ReadPosRankSum=1.953;VQSLOD=5.0036;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:36.19:265,36,0	1/1:1,1:2:5.99:60,6,0	0/0:32,0:7:11.18:0,11,105	0/0:44,1:19:21.15:0,21,193	1/1:24,0:24:60.40:427,60,0	1/1:16,0:15:23.06:181,23,0	1/1:24,0:24:21.65:163,22,0	1/1:44,2:45:99:875,115,0	1/1:11,0:11:29.76:224,30,0	1/1:18,0:18:42.13:300,42,0	1/1:10,0:10:20.16:126,20,0	1/1:12,1:13:34.88:229,35,0	1/1:6,0:6:14.48:96,14,0	1/1:6,0:6:13.08:97,13,0	1/1:2,13:15:19.86:218,20,0	1/1:8,1:9:24.05:132,24,0	1/1:18,5:23:59.53:570,60,0	1/1:17,0:16:35.01:214,35,0	1/1:23,0:23:62.29:446,62,0	1/1:13,0:12:29.42:192,29,0	1/1:12,0:11:26.88:220,27,0	1/1:10,0:10:23.59:169,24,0	1/1:11,0:10:22.33:167,22,0	1/1:16,0:15:39.48:274,39,0	1/1:1,0:1:3:26,3,0	1/1:21,1:21:56.06:397,56,0	1/1:18,0:16:21.80:153,22,0	1/1:14,0:13:23.24:200,23,0
chr10	90500429	.	T	TTTTCTTTC	10840.59	PASS	AB=0.718;AC=48;AF=0.889;AN=54;BaseQRankSum=-2.751;DP=564;FS=0.000;HRun=0;HaplotypeScore=136.8040;InbreedingCoeff=0.0315;MQ=64.71;MQ0=9;MQRankSum=0.261;QD=20.61;ReadPosRankSum=-1.671;VQSLOD=4.0050;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,3:27:6.02:246,6,0	1/1:2,3:7:9.03:311,9,0	./.	0/0:16,0:13:2.59:0,3,10	1/1:16,6:23:12.04:438,12,0	1/1:5,6:13:15.05:615,15,0	1/1:13,4:18:9.03:335,9,0	1/1:28,0:33:15.05:386,15,0	1/1:4,0:7:6.02:181,6,0	1/1:18,0:35:53.60:471,54,0	0/1:10,0:23:39.35:232,0,39	1/1:10,6:16:12.04:492,12,0	1/1:6,7:15:18.06:737,18,0	1/1:10,9:20:12.04:492,12,0	1/1:10,4:16:9.03:369,9,0	0/1:9,0:26:14.01:297,0,14	0/1:19,3:22:15.43:198,0,15	1/1:12,0:26:38.91:318,39,0	1/1:23,4:21:18.06:556,18,0	1/1:14,3:20:12.04:368,12,0	1/1:11,0:12:3.01:47,3,0	1/1:4,9:14:30.10:995,30,0	1/1:10,5:17:9.03:369,9,0	0/1:14,5:21:38.50:164,0,38	1/1:6,0:17:20.95:171,21,0	1/1:16,13:29:39.13:1439,39,0	1/1:9,15:26:12.04:492,12,0	1/1:5,1:9:3.01:123,3,0
chr10	90501286	.	C	CGTA	64.16	PASS	AB=0.625;AC=5;AF=0.63;AN=8;BaseQRankSum=-0.736;DP=159;FS=0.000;HRun=0;HaplotypeScore=18.1135;MQ=9.42;MQ0=146;MQRankSum=0.736;QD=4.58;ReadPosRankSum=0.736;VQSLOD=0.3747;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:2,0:2:3.01:0,3,37	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:1,3:3:3.01:66,3,0	./.	./.	0/1:2,3:2:0:0,0,0	./.	./.	./.	./.	1/1:0,5:2:3.01:66,3,0
chr10	90501920	.	TCA	T	1692.30	PASS	AC=10;AF=1.00;AN=10;DP=178;FS=0.000;HRun=0;HaplotypeScore=43.8440;MQ=23.99;MQ0=104;QD=20.64;VQSLOD=3.0729;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:6,10:12:35.77:376,36,0	1/1:3,8:10:20.89:223,21,0	./.	./.	./.	./.	1/1:5,18:19:47.81:515,48,0	./.	1/1:1,12:12:36.07:402,36,0	./.	./.	./.	./.	./.	./.	1/1:2,11:11:21.95:246,22,0	./.	./.	./.
chr10	90502304	.	C	CGTA	9886.71	PASS	AB=0.553;AC=33;AF=0.635;AN=52;BaseQRankSum=-8.053;DP=589;FS=4.559;HRun=0;HaplotypeScore=82.0421;InbreedingCoeff=0.8938;MQ=34.90;MQ0=140;MQRankSum=-6.344;QD=27.54;ReadPosRankSum=1.468;VQSLOD=4.9056;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:34:60.19:0,60,934	0/0:10,0:7:18.06:0,18,288	./.	./.	1/1:2,13:15:9.03:197,9,0	1/1:0,15:12:15.05:329,15,0	1/1:4,20:20:17.91:361,18,0	1/1:5,19:21:51.15:1015,51,0	1/1:1,14:16:30.10:658,30,0	0/0:22,0:18:45.15:0,45,716	0/0:7,0:5:6.02:0,6,96	1/1:2,25:18:36.12:790,36,0	1/1:3,20:18:27.09:592,27,0	1/1:1,24:21:45.12:989,45,0	0/0:28,0:22:51.16:0,51,794	0/0:21,0:16:32.71:0,33,505	0/0:30,0:25:57.15:0,57,870	0/0:26,0:22:35.79:0,36,470	1/1:7,10:14:39.06:731,39,0	1/1:3,9:9:11.63:263,12,0	1/1:6,32:28:44.60:943,45,0	1/1:2,9:9:9.03:198,9,0	1/1:0,16:13:18.06:395,18,0	1/1:0,29:28:36.11:791,36,0	0/0:21,0:15:33.11:0,33,518	0/1:4,17:18:3.07:854,0,3	1/1:6,11:13:21.07:452,21,0	1/1:2,14:11:15.05:330,15,0
chr10	90502918	.	A	AGGG	5153.04	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-7.464;DP=577;FS=2.587;HRun=7;HaplotypeScore=83.0144;InbreedingCoeff=0.9523;MQ=83.76;MQ0=0;MQRankSum=-3.081;QD=36.29;ReadPosRankSum=1.089;VQSLOD=3.9306;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:75.21:0,75,1020	1/1:3,1:7:3.01:62,3,0	0/0:30,0:30:68.90:0,69,828	0/0:12,0:12:29.97:0,30,339	0/0:18,0:18:42.12:0,42,570	0/0:21,0:21:54.16:0,54,720	0/0:24,0:24:66.09:0,66,840	0/0:16,0:16:30.06:0,30,409	0/0:22,0:22:60.17:0,60,802	1/1:10,2:12:11.99:172,12,0	1/1:3,7:10:9.03:186,9,0	0/0:29,0:29:78.23:0,78,1047	0/0:21,0:21:48.15:0,48,654	0/0:22,0:22:60.17:0,60,802	1/1:3,21:25:57.19:1135,57,0	1/1:4,22:27:16.24:1040,16,0	1/1:3,21:28:72.18:1376,72,0	1/1:0,12:13:33.09:645,33,0	0/0:16,0:16:45.06:0,45,589	0/0:15,0:15:33.09:0,33,425	0/0:43,0:43:99:0,108,1424	0/0:20,0:20:59.66:0,60,755	0/0:17,0:17:42.13:0,42,572	0/0:25,0:25:63.18:0,63,860	1/1:4,15:19:27.09:536,27,0	0/0:20,0:20:51.15:0,51,695	0/0:24,0:24:66.20:0,66,899	0/0:9,0:9:27.08:0,27,351
chr10	90504338	.	G	GT	13307.69	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-15.559;DP=699;FS=7.254;HRun=6;HaplotypeScore=74.1786;InbreedingCoeff=0.9120;MQ=72.53;MQ0=0;MQRankSum=-1.073;QD=30.18;ReadPosRankSum=2.269;VQSLOD=5.5304;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:96.18:0,96,970	0/0:14,0:14:42.09:0,42,427	0/1:26,0:26:35.10:35,0,345	0/0:19,0:19:22.36:0,22,237	1/1:1,30:31:87.14:1023,87,0	1/1:0,18:18:51.16:642,51,0	1/1:0,24:24:51.16:642,51,0	1/1:5,28:33:87.17:1067,87,0	1/1:4,28:32:60.19:755,60,0	0/0:31,0:31:87.19:0,87,883	0/0:15,0:15:45.10:0,45,458	1/1:0,22:22:63.20:793,63,0	1/1:1,23:24:60.19:751,60,0	1/1:1,19:20:54.17:679,54,0	0/0:39,0:39:99:0,111,1132	0/0:23,0:23:66.13:0,66,666	0/0:34,0:34:96.19:0,96,970	0/0:26,0:26:66.14:0,66,673	1/1:2,24:26:75.21:915,75,0	1/1:0,19:19:51.16:636,51,0	1/1:0,13:13:36.12:453,36,0	1/1:0,22:22:63.20:782,63,0	1/1:0,20:21:54.17:670,54,0	1/1:1,25:26:66.21:830,66,0	0/0:20,0:20:60.14:0,60,612	1/1:5,30:35:7.47:1038,7,0	1/1:2,22:24:69.20:854,69,0	1/1:5,20:25:60.18:743,60,0
chr10	90504844	.	CAATGTTTGCT	C	6863.60	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.850;DP=717;FS=4.122;HRun=0;HaplotypeScore=247.7790;InbreedingCoeff=0.9962;MQ=79.58;MQ0=0;MQRankSum=-13.483;QD=74.60;ReadPosRankSum=0.035;VQSLOD=4.2250;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,184,9260	0/0:11,0:11:33.11:0,33,1618	0/0:18,0:18:51.17:0,51,2276	0/0:21,0:21:57.20:0,57,2742	0/0:26,0:26:78.25:0,78,4024	0/0:30,0:30:90.29:0,90,4539	0/0:27,0:27:78.25:0,78,3830	0/0:30,0:30:90.30:0,90,4172	0/0:18,0:18:54.19:0,54,2757	1/1:1,19:20:54.19:1770,54,0	1/1:2,16:18:45.15:1244,45,0	0/0:31,0:31:84.29:0,84,4324	0/0:24,0:24:72.25:0,72,3811	0/0:33,0:33:99:0,99,4682	0/0:40,0:40:99:0,114,5901	1/1:5,19:24:54.19:1800,54,0	0/0:31,0:31:90.04:0,90,4552	1/1:3,6:9:18.06:560,18,0	0/0:29,0:29:84.29:0,84,4364	0/0:27,0:27:78.25:0,78,3745	0/0:26,0:26:75.24:0,75,3704	0/0:23,0:23:69.24:0,69,3550	0/0:23,0:23:66.23:0,66,3006	0/0:25,0:25:75.21:0,75,3561	1/1:4,17:21:48.16:1489,48,0	0/0:38,0:38:99:0,111,5695	0/0:26,0:26:78.27:0,78,4100	0/0:6,0:6:18.06:0,18,961
chr10	90505409	.	CAACCAAACCAAACCA	C	4372.10	PASS	AB=1.000;AC=39;AF=0.780;AN=50;BaseQRankSum=-0.964;DP=561;FS=16.103;HRun=0;HaplotypeScore=194.3914;InbreedingCoeff=0.5040;MQ=69.43;MQ0=4;MQRankSum=-0.742;QD=10.39;ReadPosRankSum=0.849;VQSLOD=2.6401;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:34:27.04:0,27,581	1/1:8,0:8:12.01:226,12,0	0/0:23,0:14:0.47:0,0,1	./.	1/1:10,6:16:14.65:165,15,0	./.	1/1:22,0:26:14.99:152,15,0	1/1:32,0:30:14.92:114,15,0	1/1:12,13:25:6.02:230,6,0	0/1:13,0:13:25.80:26,0,71	0/0:3,0:8:2.97:0,3,20	1/1:10,11:21:6.02:177,6,0	1/1:17,10:27:6.02:246,6,0	1/1:16,0:17:6.01:93,6,0	1/1:19,13:32:11.86:387,12,0	1/1:12,0:27:3.01:105,3,0	1/1:22,0:22:20.95:319,21,0	0/0:20,0:20:3.99:0,4,56	1/1:18,7:25:16.47:367,16,0	1/1:9,4:13:8.91:157,9,0	1/1:25,0:35:8.86:68,9,0	1/1:10,2:12:2.94:18,3,0	./.	1/1:21,0:21:17.91:307,18,0	0/0:14,0:14:8.11:0,8,53	1/1:5,12:17:32.95:724,33,0	1/1:12,14:26:6.02:246,6,0	1/1:3,3:6:6.02:247,6,0
chr10	90506375	.	CAA	C	2724.90	PASS	AB=0.759;AC=28;AF=0.500;AN=56;BaseQRankSum=2.582;DP=640;FS=1.269;HRun=17;HaplotypeScore=142.2011;InbreedingCoeff=0.3244;MQ=67.62;MQ0=7;MQRankSum=-4.752;QD=7.31;ReadPosRankSum=1.975;VQSLOD=0.5798;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,15:27:7.63:172,8,0	0/0:2,0:7:13.08:0,13,81	0/0:37,1:18:18.51:0,19,123	0/0:28,0:19:12.48:0,12,84	1/1:16,10:26:34.83:258,35,0	1/1:13,5:18:9.64:110,10,0	0/1:10,2:13:11.15:42,0,11	0/1:13,7:20:7.33:137,0,7	0/1:13,2:15:11.98:144,0,12	0/0:26,0:31:62.89:0,63,594	0/0:25,0:28:61.37:0,61,585	0/1:13,7:19:18.78:171,0,19	1/1:16,3:20:26.32:168,26,0	1/1:20,2:22:6.03:164,6,0	0/1:24,1:28:31.97:32,0,41	0/0:37,0:39:88.24:0,88,856	0/0:19,0:29:53.46:0,53,274	0/0:32,0:37:79.23:0,79,786	0/1:13,7:19:5.99:139,0,6	1/1:9,10:20:11.68:261,12,0	0/1:9,9:18:0.81:161,0,1	0/1:10,5:17:14.47:153,0,14	1/1:10,8:19:25.13:211,25,0	0/1:9,2:13:10.31:76,0,10	0/0:21,1:26:26.42:0,26,442	1/1:7,7:16:23.97:170,24,0	1/1:19,5:24:33.39:257,33,0	0/1:7,5:12:9.15:93,0,9
chr10	90506412	.	C	CACTA	20413.83	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-5.973;DP=600;FS=1.060;HRun=0;HaplotypeScore=121.1851;InbreedingCoeff=0.9925;MQ=62.81;MQ0=1;MQRankSum=-11.480;QD=60.94;ReadPosRankSum=0.367;VQSLOD=6.4809;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:63.22:0,63,1191	0/0:11,0:11:33.11:0,33,626	0/0:31,0:25:33.02:0,33,984	0/0:23,0:17:42.14:0,42,735	1/1:3,15:19:51.12:1184,51,0	1/1:1,12:13:33.11:877,33,0	1/1:3,15:18:45.11:1108,45,0	1/1:8,27:35:99:2422,102,0	1/1:2,18:20:54.14:1366,54,0	0/0:24,0:24:69.22:0,69,1206	0/0:23,0:23:66.23:0,66,1253	1/1:4,17:21:45.11:1137,45,0	1/1:3,9:12:27.09:691,27,0	1/1:4,15:21:42.06:1006,42,0	0/0:12,0:12:12.04:0,12,228	0/0:27,0:27:78.27:0,78,1466	0/0:28,0:28:56.53:0,57,1365	0/0:28,0:28:81.26:0,81,1504	1/1:6,16:23:60.18:1423,60,0	1/1:4,24:29:69.16:1678,69,0	1/1:1,14:15:21.07:565,21,0	1/1:6,20:28:64.46:1655,64,0	1/1:2,17:20:48.16:1289,48,0	1/1:1,9:11:15.05:403,15,0	0/0:28,0:28:72.21:0,72,1297	1/1:2,17:20:57.17:1441,57,0	1/1:2,15:18:48.12:1224,48,0	1/1:2,8:12:36.12:944,36,0
chr10	90506902	.	CAA	C	82.51	PASS	AC=4;AF=0.080;AN=50;BaseQRankSum=0.662;DP=151;FS=0.000;HRun=15;HaplotypeScore=25.9790;InbreedingCoeff=0.3859;MQ=67.26;MQ0=3;MQRankSum=1.621;QD=9.17;ReadPosRankSum=1.874;VQSLOD=-0.2982;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,1:11:19.36:0,19,108	./.	0/0:7,0:3:5.27:0,5,21	0/0:15,0:9:14.90:0,15,150	0/0:5,0:5:12.03:0,12,131	0/0:6,0:6:12.03:0,12,139	0/0:3,0:3:6.49:0,6,74	0/0:24,0:21:35.90:0,36,428	0/0:4,0:3:6.01:0,6,56	0/0:4,0:3:6.02:0,6,82	0/0:3,0:3:6.44:0,6,61	0/0:2,0:2:6.02:0,6,74	0/0:3,0:3:6.02:0,6,75	./.	1/1:0,2:2:3:26,3,0	0/0:1,0:1:3.01:0,3,30	1/1:0,7:7:18:159,18,0	0/0:8,0:8:24.05:0,24,305	0/0:10,0:9:26.94:0,27,303	0/0:4,0:4:7.26:0,7,77	0/0:6,0:6:11.98:0,12,111	0/0:2,0:2:3.01:0,3,37	0/0:1,0:1:3.01:0,3,37	0/0:5,0:5:5.97:0,6,56	0/0:2,0:2:6.02:0,6,81	0/0:9,0:9:18.88:0,19,198	0/0:5,0:5:7.22:0,7,57	./.
chr10	90506915	.	A	AG	470.28	PASS	AB=0.903;AC=15;AF=0.300;AN=50;BaseQRankSum=-1.107;DP=191;FS=4.410;HRun=0;HaplotypeScore=29.6267;InbreedingCoeff=-0.2052;MQ=69.23;MQ0=2;MQRankSum=3.700;QD=4.52;ReadPosRankSum=1.137;VQSLOD=2.7711;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:20.79:0,21,263	./.	0/0:12,0:6:9.74:0,10,59	0/0:14,0:9:17.03:0,17,174	0/1:3,3:7:25.04:38,0,25	0/1:6,0:7:26.46:26,0,46	0/1:6,0:6:26.51:47,0,27	0/1:16,15:29:99:271,0,154	1/1:1,1:4:5.78:31,6,0	0/0:4,0:3:9:0,9,104	0/0:3,0:3:8.97:0,9,88	0/0:3,0:3:5.93:0,6,40	0/1:4,0:4:8.95:9,0,32	./.	0/0:3,0:3:5.93:0,6,45	1/1:1,0:1:0.89:2,1,0	0/0:10,0:10:26.50:0,26,171	0/0:12,0:12:34.29:0,34,386	0/1:12,0:11:20.64:21,0,144	0/0:4,0:4:7.18:0,7,43	0/1:4,0:6:20.65:21,0,25	0/1:3,0:3:16.12:16,0,21	0/0:1,0:1:2.97:0,3,20	0/1:6,0:6:24.40:39,0,24	0/0:4,0:4:7.27:0,7,83	0/1:11,0:11:75.66:77,0,76	0/1:5,0:5:14.79:15,0,33	./.
chr10	90507065	.	T	TA	2030.66	PASS	AB=1.000;AC=42;AF=0.778;AN=54;BaseQRankSum=1.317;DP=260;FS=9.706;HRun=12;HaplotypeScore=47.3443;InbreedingCoeff=0.5609;MQ=78.64;MQ0=2;MQRankSum=-0.104;QD=10.86;ReadPosRankSum=-0.653;VQSLOD=1.7165;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:51.03:481,51,0	1/1:2,0:2:5.75:30,6,0	0/0:19,0:11:4.70:0,5,55	0/0:15,0:12:3:0,3,39	1/1:8,0:8:20.05:114,20,0	1/1:15,0:14:25.68:134,26,0	1/1:5,0:5:8.52:43,9,0	1/1:31,0:31:64.47:328,64,0	./.	0/1:4,0:4:4.50:5,0,35	0/0:6,0:6:17.14:0,17,116	1/1:3,0:3:8.69:48,9,0	1/1:1,0:1:2.84:14,3,0	1/1:1,0:1:2.84:14,3,0	1/1:4,0:4:5.84:35,6,0	0/1:5,0:5:2.58:3,0,54	1/1:24,0:24:60.22:327,60,0	0/0:21,0:21:48.46:0,48,340	1/1:22,0:22:46.04:239,46,0	1/1:2,0:2:2.84:14,3,0	1/1:5,0:5:8.52:43,9,0	1/1:1,0:1:2.84:14,3,0	1/1:2,0:2:2.92:17,3,0	1/1:5,0:5:5.68:29,6,0	0/0:9,0:9:20.88:0,21,153	1/1:8,0:8:22.76:115,23,0	1/1:10,0:9:14.16:71,14,0	1/1:6,0:6:14.20:72,14,0
chr10	90507077	.	A	AAC	5675	PASS	AB=0.952;AC=43;AF=0.796;AN=54;BaseQRankSum=-8.262;DP=292;FS=21.748;HRun=0;HaplotypeScore=46.5934;InbreedingCoeff=0.3893;MQ=67.43;MQ0=2;MQRankSum=-0.255;QD=26.03;ReadPosRankSum=-0.394;VQSLOD=3.0010;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:8:0,8,195	1/1:0,0:3:5.85:35,6,0	0/0:15,0:9:11.08:0,11,138	0/0:12,0:10:20.92:0,21,167	1/1:0,9:9:21.07:343,21,0	1/1:2,14:17:27.01:431,27,0	1/1:1,5:6:9.03:158,9,0	1/1:4,33:45:99:1452,115,0	./.	1/1:5,0:6:8.20:93,8,0	0/1:10,0:10:22.88:60,0,23	1/1:1,2:4:9.03:154,9,0	1/1:0,3:3:3.01:53,3,0	1/1:0,2:2:3.01:53,3,0	1/1:0,0:4:5.85:34,6,0	0/1:5,1:6:16.40:85,0,16	1/1:0,1:22:61.55:402,62,0	0/0:18,0:18:3.10:0,3,50	1/1:0,21:24:66.80:884,67,0	1/1:1,2:3:5.95:71,6,0	1/1:0,5:5:9.03:158,9,0	1/1:0,2:2:3.01:52,3,0	1/1:0,4:4:2.99:49,3,0	1/1:1,4:5:6.02:105,6,0	0/1:9,0:9:9.72:10,0,16	1/1:0,10:11:32.97:470,33,0	1/1:2,9:11:15.05:261,15,0	1/1:0,6:6:15.05:263,15,0
chr10	90507586	.	C	CG	19910.72	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-13.691;DP=775;FS=1.851;HRun=0;HaplotypeScore=79.3220;InbreedingCoeff=0.9997;MQ=86.80;MQ0=0;MQRankSum=-2.874;QD=43.57;ReadPosRankSum=-0.245;VQSLOD=5.0253;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,166,2305	0/0:9,0:9:24.08:0,24,335	0/0:26,0:26:69.20:0,69,933	0/0:29,0:29:84.25:0,84,1128	1/1:0,26:26:69.24:1102,69,0	1/1:1,25:26:69.24:1102,69,0	1/1:1,23:24:63.21:1007,63,0	1/1:1,40:41:99:1754,114,0	1/1:0,33:33:99:1580,99,0	0/0:26,0:26:78.26:0,78,1089	0/0:21,0:21:63.21:0,63,878	1/1:0,26:26:69.24:1101,69,0	1/1:1,20:21:57.19:894,57,0	1/1:1,28:29:78.27:1244,78,0	0/0:38,0:38:99:0,111,1534	0/0:30,0:30:90.29:0,90,1241	0/0:43,0:43:99:0,129,1778	0/0:18,0:18:54.18:0,54,751	1/1:1,21:22:66.16:1001,66,0	1/1:0,15:15:33.11:527,33,0	1/1:1,41:42:99:1724,108,0	1/1:0,15:15:42.14:671,42,0	1/1:0,13:13:39.13:623,39,0	1/1:0,27:27:72.25:1150,72,0	0/0:21,0:21:63.21:0,63,878	1/1:1,44:45:93.47:2043,93,0	1/1:1,35:37:99:1669,105,0	1/1:0,15:15:45.15:717,45,0
chr10	90507840	.	AAG	A	12084.64	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=13.381;DP=538;FS=12.182;HRun=0;HaplotypeScore=68.2047;InbreedingCoeff=0.9794;MQ=73.67;MQ0=0;MQRankSum=-2.992;QD=38.98;ReadPosRankSum=0.640;VQSLOD=6.1733;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1924	0/0:7,0:7:21.07:0,21,383	0/0:19,0:19:49.92:0,50,716	0/0:7,0:7:5.86:0,6,263	1/1:1,15:16:42.14:607,42,0	1/1:0,20:20:54.18:780,54,0	1/1:0,12:12:36.12:520,36,0	1/1:1,34:35:99:1425,105,0	1/1:0,18:18:48.16:693,48,0	0/0:23,0:23:69.23:0,69,1232	0/0:20,0:20:57.18:0,57,1009	1/1:1,15:16:39.13:563,39,0	1/1:0,14:14:42.14:607,42,0	1/1:1,10:11:30.10:433,30,0	0/0:21,0:21:63.22:0,63,1148	0/0:19,1:20:16.85:0,17,995	0/0:27,0:27:81.15:0,81,1407	0/0:21,0:21:60.16:0,60,998	1/1:1,22:22:63.14:805,63,0	1/1:3,23:26:69.23:994,69,0	1/1:0,9:9:15.03:197,15,0	1/1:0,14:14:39.09:540,39,0	1/1:1,17:18:51.17:736,51,0	1/1:0,8:8:21.07:303,21,0	0/0:24,0:24:72.19:0,72,1235	1/1:0,27:27:81.20:1062,81,0	1/1:1,27:28:81.27:1170,81,0	1/1:0,15:15:45.15:650,45,0
chr10	90508283	.	A	ACTTAT	30844.54	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-2.486;DP=777;FS=3.243;HRun=0;HaplotypeScore=162.0159;InbreedingCoeff=0.9970;MQ=68.94;MQ0=0;MQRankSum=-18.382;QD=65.07;ReadPosRankSum=-3.239;VQSLOD=4.4322;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,132,2630	0/0:9,0:9:21.07:0,21,431	0/0:19,0:19:51.14:0,51,967	0/0:19,0:18:50.63:0,51,941	1/1:5,17:23:48.05:1193,48,0	1/1:8,15:24:63.21:1608,63,0	1/1:11,20:33:72.25:2015,72,0	1/1:10,22:34:84.76:2397,85,0	1/1:5,31:38:96.33:2841,96,0	0/0:34,0:34:99:0,99,1979	0/0:17,0:17:48.15:0,48,942	1/1:7,24:33:75.26:2188,75,0	1/1:10,29:41:96.33:2775,96,0	1/1:5,30:36:84.29:2520,84,0	0/0:43,0:43:99:0,129,2597	0/0:38,0:38:99:0,108,2194	0/0:44,0:44:99:0,123,2474	0/0:19,0:19:45.12:0,45,821	1/1:9,16:24:54.18:1537,54,0	1/1:8,21:29:72.21:1966,72,0	1/1:8,25:33:78.20:2120,78,0	1/1:1,11:12:33.11:1004,33,0	1/1:4,14:19:48.12:1256,48,0	1/1:6,17:24:39.04:933,39,0	0/0:12,0:12:30.10:0,30,615	1/1:6,30:37:90.31:2659,90,0	1/1:8,16:26:51.01:1375,51,0	1/1:2,5:7:15.05:457,15,0
chr10	90508619	.	GCT	G	10924.94	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=19.435;DP=554;FS=1.394;HRun=0;HaplotypeScore=153.5698;InbreedingCoeff=0.9725;MQ=86.72;MQ0=0;MQRankSum=-18.863;QD=42.51;ReadPosRankSum=-1.290;VQSLOD=5.3426;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,163,3272	0/0:11,0:11:33.10:0,33,619	0/0:25,0:25:72.24:0,72,1382	0/0:24,0:23:63.18:0,63,1155	1/1:0,10:10:15.05:239,15,0	1/1:0,14:14:42.14:642,42,0	1/1:1,14:15:45.15:703,45,0	1/1:0,15:15:42.14:684,42,0	1/1:2,15:17:51.14:766,51,0	0/0:24,0:24:72.25:0,72,1464	0/0:14,0:14:42.14:0,42,853	1/1:1,21:22:66.21:996,66,0	1/1:0,18:18:54.18:831,54,0	1/1:0,19:19:54.18:854,54,0	0/0:29,0:29:87.28:0,87,1692	0/0:36,0:36:99:0,108,2158	0/0:40,0:40:99:0,120,2421	0/0:22,0:22:63.22:0,63,1280	1/1:0,16:16:48.13:729,48,0	1/1:0,11:11:30.10:456,30,0	1/1:3,14:17:35.21:447,35,0	1/1:0,8:9:27.09:395,27,0	1/1:0,12:12:36.10:553,36,0	1/1:0,16:16:30.10:453,30,0	0/0:17,0:17:51.16:0,51,977	1/1:1,22:23:69.24:1119,69,0	1/1:1,21:22:66.21:1010,66,0	1/1:0,1:1:3.01:49,3,0
chr10	90508626	.	TG	T	7765.71	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=19.409;DP=543;FS=0.662;HRun=1;HaplotypeScore=154.0287;InbreedingCoeff=0.9722;MQ=88.87;MQ0=2;MQRankSum=-18.794;QD=30.69;ReadPosRankSum=-1.880;VQSLOD=4.1121;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,157,2453	0/0:10,0:10:30.10:0,30,471	0/0:29,0:28:84.18:0,84,1235	0/0:25,0:24:63.81:0,64,977	1/1:1,8:9:14.88:151,15,0	1/1:1,14:15:44.18:468,44,0	1/1:0,14:14:42.07:517,42,0	1/1:0,15:15:42.14:544,42,0	1/1:0,15:15:43.46:478,43,0	0/0:25,0:25:75.26:0,75,1198	0/0:14,0:14:42.12:0,42,626	1/1:0,22:22:60.53:672,61,0	1/1:1,18:19:54.68:599,55,0	1/1:0,20:20:56.14:681,56,0	0/0:25,0:25:72.25:0,72,1151	0/0:32,0:32:96.33:0,96,1533	0/0:41,0:41:99:0,123,1916	0/0:21,0:21:63.21:0,63,1007	1/1:0,13:13:39.13:505,39,0	1/1:0,11:11:28.52:282,29,0	1/1:1,16:15:27.43:232,27,0	1/1:2,8:10:28.34:284,28,0	1/1:0,12:12:33.44:385,33,0	1/1:0,16:16:27.86:300,28,0	0/0:15,0:15:42.14:0,42,667	1/1:0,23:22:66.21:855,66,0	1/1:0,21:21:62.23:773,62,0	1/1:0,1:1:3.01:39,3,0
chr10	90508730	.	C	CG	14431.27	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-10.140;DP=658;FS=1.394;HRun=5;HaplotypeScore=64.7239;InbreedingCoeff=0.9930;MQ=85.64;MQ0=0;MQRankSum=-6.812;QD=33.80;ReadPosRankSum=1.223;VQSLOD=5.3638;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,35:39:96.31:1261,96,0	0/0:6,0:6:15.04:0,15,161	0/0:26,0:26:71.84:0,72,722	0/0:18,0:18:47.87:0,48,462	1/1:3,34:38:96.18:1232,96,0	1/1:1,21:21:60.20:788,60,0	1/1:4,23:27:66.21:868,66,0	1/1:2,24:26:69.15:853,69,0	1/1:2,22:24:66.21:867,66,0	0/0:27,0:27:72.15:0,72,761	0/0:23,0:23:60.11:0,60,631	1/1:1,22:23:66.21:867,66,0	1/1:2,11:13:29.93:394,30,0	1/1:0,25:25:69.22:906,69,0	0/0:27,0:27:81.20:0,81,870	0/0:34,0:34:99:0,102,1083	0/0:27,0:27:78.20:0,78,838	0/0:17,0:17:45.07:0,45,471	1/1:2,18:20:57.16:733,57,0	1/1:4,28:32:84.27:1090,84,0	1/1:3,22:25:44.70:565,45,0	1/1:0,17:18:54.18:707,54,0	1/1:0,19:19:57.18:740,57,0	1/1:3,22:25:60.19:780,60,0	0/0:26,0:26:63.07:0,63,645	1/1:2,26:28:49.02:993,49,0	1/1:1,17:18:48.16:631,48,0	1/1:0,5:5:12.04:157,12,0
chr10	90509472	.	G	GT	14016.29	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-15.010;DP=741;FS=21.644;HRun=6;HaplotypeScore=65.1382;InbreedingCoeff=0.9996;MQ=78.59;MQ0=0;MQRankSum=-1.350;QD=30.47;ReadPosRankSum=0.881;VQSLOD=3.0745;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.15:0,78,787	0/0:17,0:17:48.09:0,48,479	0/0:22,0:21:50.10:0,50,478	0/0:18,0:18:35.89:0,36,338	1/1:4,27:32:75.20:920,75,0	1/1:2,19:21:57.18:717,57,0	1/1:4,18:22:48.15:604,48,0	1/1:5,40:45:99:1450,120,0	1/1:1,26:27:69.22:868,69,0	0/0:44,0:44:99:0,120,1215	0/0:27,0:27:66.12:0,66,661	1/1:2,31:33:84.27:1056,84,0	1/1:2,25:27:72.23:903,72,0	1/1:3,22:25:54.17:680,54,0	0/0:37,0:37:99:0,102,1025	0/0:23,0:23:37.21:0,37,565	0/0:22,0:22:57.12:0,57,581	0/0:21,0:21:60.13:0,60,612	1/1:4,16:20:48.14:582,48,0	1/1:2,25:27:50.67:948,51,0	1/1:3,24:27:60.19:755,60,0	1/1:2,27:29:75.11:904,75,0	1/1:5,23:28:60.18:738,60,0	1/1:1,14:15:30.10:377,30,0	0/0:21,0:21:60.13:0,60,607	1/1:6,38:44:99:1384,111,0	1/1:3,26:28:66.18:828,66,0	1/1:0,9:9:24.08:302,24,0
chr10	90509655	.	TG	T	14909.75	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=13.913;DP=720;FS=4.988;HRun=2;HaplotypeScore=71.8556;InbreedingCoeff=0.9917;MQ=85.20;MQ0=0;MQRankSum=-3.204;QD=36.01;ReadPosRankSum=2.273;VQSLOD=5.5896;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,153,2244	0/0:19,0:19:57.19:0,57,852	0/0:24,0:24:72.24:0,72,1044	0/0:25,0:25:72.23:0,72,1020	1/1:0,25:25:75.21:956,75,0	1/1:0,17:17:45.15:584,45,0	1/1:0,23:23:63.20:818,63,0	1/1:2,37:39:99:1424,111,0	1/1:0,33:33:93.30:1207,93,0	0/0:28,0:28:81.27:0,81,1214	0/0:14,0:14:39.12:0,39,563	1/1:1,28:29:78.25:1010,78,0	1/1:1,19:20:51.17:662,51,0	1/1:0,22:22:66.21:857,66,0	0/0:39,0:39:99:0,117,1732	0/0:36,0:36:99:0,108,1562	0/0:23,0:23:69.19:0,69,989	0/0:24,0:24:66.20:0,66,965	1/1:0,16:16:48.13:607,48,0	1/1:0,19:19:54.18:701,54,0	1/1:1,29:30:81.26:1052,81,0	1/1:0,34:34:96.31:1246,96,0	1/1:1,19:20:57.19:740,57,0	1/1:1,22:23:57.19:740,57,0	0/0:22,0:22:63.21:0,63,944	1/1:5,34:39:69.37:1372,69,0	1/1:0,22:22:63.20:818,63,0	1/1:0,3:3:9.03:117,9,0
chr10	90509897	.	T	TC	18885.67	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=16.997;DP=821;FS=0.262;HRun=1;HaplotypeScore=114.2952;InbreedingCoeff=0.9977;MQ=86.71;MQ0=0;MQRankSum=-2.391;QD=38.15;ReadPosRankSum=0.009;VQSLOD=4.4850;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,162,2056	0/0:12,0:12:36.09:0,36,440	0/0:28,0:28:83.81:0,84,1010	0/0:26,0:26:78.13:0,78,923	1/1:0,27:27:63.21:896,63,0	1/1:0,24:24:60.20:865,60,0	1/1:1,25:26:69.03:945,69,0	1/1:0,41:42:99:1576,114,0	1/1:0,29:29:69.23:1000,69,0	0/0:28,0:28:81.24:0,81,1025	0/0:16,0:16:48.15:0,48,610	1/1:1,39:40:99:1516,105,0	1/1:0,36:36:99:1477,102,0	1/1:0,38:38:99:1606,111,0	0/0:31,0:31:87.23:0,87,1075	0/0:35,0:35:99:0,105,1335	0/0:40,0:40:99:0,117,1427	0/0:36,0:36:99:0,108,1368	1/1:2,33:35:99:1342,99,0	1/1:1,22:23:69.18:975,69,0	1/1:3,35:38:96.30:1358,96,0	1/1:1,28:29:78.11:1078,78,0	1/1:1,21:22:54.18:778,54,0	1/1:0,32:32:96.32:1387,96,0	0/0:18,0:18:54.16:0,54,678	1/1:1,25:26:75.24:1049,75,0	1/1:1,22:23:57.19:821,57,0	1/1:0,5:5:15.05:218,15,0
chr10	90510239	.	ATTTTTT	A	9481.13	PASS	AB=0.800;AC=33;AF=0.589;AN=56;BaseQRankSum=-5.496;DP=561;FS=10.531;HRun=18;HaplotypeScore=144.3748;InbreedingCoeff=0.9034;MQ=70.02;MQ0=5;MQRankSum=-12.332;QD=28.05;ReadPosRankSum=2.741;VQSLOD=1.9325;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:33:54.16:0,54,840	0/0:5,0:14:35.07:0,35,383	0/0:27,0:17:35.95:0,36,621	0/0:19,0:16:23.65:0,24,333	1/1:9,10:22:22.94:323,23,0	1/1:8,15:25:44.42:693,44,0	1/1:3,9:13:26.65:421,27,0	1/1:3,23:27:63.20:1024,63,0	1/1:5,13:18:32.68:559,33,0	0/0:11,0:23:52.89:0,53,623	0/0:7,0:13:27.02:0,27,340	1/1:7,8:15:23.77:398,24,0	1/1:1,18:21:45.37:680,45,0	1/1:7,15:22:44.52:761,45,0	0/0:7,0:24:42.02:0,42,419	0/0:2,0:13:32.74:0,33,297	0/0:6,0:19:41.05:0,41,397	0/0:3,0:21:44.04:0,44,381	1/1:9,11:22:35.15:529,35,0	1/1:6,20:26:31.74:834,32,0	0/1:12,3:16:11.53:70,0,12	1/1:5,16:21:38.44:626,38,0	1/1:9,14:23:43.06:715,43,0	1/1:3,6:9:3.76:144,4,0	0/0:4,0:15:31.85:0,32,337	1/1:8,22:30:53.03:873,53,0	1/1:6,14:19:38.66:629,39,0	1/1:3,5:8:11.82:203,12,0
chr10	90510666	.	A	ATTTT	9911.51	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-6.157;DP=649;FS=1.198;HRun=11;HaplotypeScore=143.4323;InbreedingCoeff=0.7684;MQ=80.36;MQ0=0;MQRankSum=-4.336;QD=16.77;ReadPosRankSum=-1.088;VQSLOD=2.0746;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:36:26.89:0,27,102	1/1:2,0:15:23.24:136,23,0	0/1:18,0:18:8.74:9,0,196	0/0:22,0:22:27.65:0,28,356	1/1:1,0:14:35.91:391,36,0	1/1:4,2:21:33.11:505,33,0	1/1:4,1:18:26.83:300,27,0	1/1:14,0:36:71.91:812,72,0	1/1:2,0:15:23.99:277,24,0	1/1:8,0:24:42.18:288,42,0	1/1:6,0:26:47.97:319,48,0	1/1:11,0:23:32.98:432,33,0	1/1:4,0:26:48.09:626,48,0	1/1:4,1:14:27:366,27,0	1/1:4,0:26:41.43:291,41,0	1/1:4,0:28:40.75:265,41,0	1/1:4,0:18:21.57:156,22,0	1/1:1,0:19:40.99:241,41,0	1/1:13,0:25:31.69:457,32,0	1/1:5,2:25:52.70:676,53,0	1/1:10,0:29:29.01:254,29,0	1/1:5,0:22:33.98:392,34,0	1/1:4,0:16:22.80:246,23,0	1/1:4,1:23:42.05:533,42,0	1/1:5,0:24:26.68:198,27,0	1/1:6,1:37:87.14:1066,87,0	1/1:8,1:36:45.13:622,45,0	1/1:5,0:10:5.93:54,6,0
chr10	90511153	.	A	AT	9697.05	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-15.787;DP=594;FS=29.564;HRun=7;HaplotypeScore=64.3742;InbreedingCoeff=0.9741;MQ=81.82;MQ0=0;MQRankSum=-3.034;QD=28.86;ReadPosRankSum=0.837;VQSLOD=2.9498;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:90.12:0,90,862	0/0:10,0:10:24.04:0,24,232	0/0:20,0:20:45.30:0,45,459	0/0:13,0:14:23.55:0,24,213	1/1:1,15:16:42.09:488,42,0	1/1:2,16:18:39.12:471,39,0	1/1:1,29:31:78.11:921,78,0	1/1:8,25:33:72.19:845,72,0	1/1:2,14:16:39.12:469,39,0	0/0:30,0:30:72.09:0,72,692	0/0:25,0:25:60.07:0,60,574	1/1:3,20:23:54.13:637,54,0	1/1:2,19:21:45.14:544,45,0	1/1:1,18:19:48.15:580,48,0	0/0:31,0:31:75.11:0,75,724	0/0:25,0:25:75.12:0,75,724	0/0:35,0:35:93.08:0,93,883	0/0:18,0:18:54.09:0,54,521	1/1:5,21:26:63.18:750,63,0	1/1:0,23:23:69.18:815,69,0	1/1:2,26:28:81.25:977,81,0	1/1:0,8:9:24.07:289,24,0	1/1:2,12:14:30.09:362,30,0	1/1:1,24:25:60.18:725,60,0	0/0:13,0:13:39.06:0,39,377	1/1:2,13:15:36.11:435,36,0	1/1:2,10:12:30.09:354,30,0	1/1:4,3:7:3.01:36,3,0
chr10	90511469	.	C	CA	20232.09	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-19.135;DP=766;FS=13.377;HRun=1;HaplotypeScore=67.9651;InbreedingCoeff=0.9977;MQ=82.46;MQ0=0;MQRankSum=-3.888;QD=41.89;ReadPosRankSum=2.814;VQSLOD=4.2875;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:99:0,120,1558	0/0:13,0:13:36.10:0,36,450	0/0:18,0:18:51.16:0,51,638	0/0:25,0:25:72:0,72,908	1/1:1,27:28:81.27:1214,81,0	1/1:2,28:30:78.26:1165,78,0	1/1:1,18:19:51.09:714,51,0	1/1:2,37:39:99:1579,108,0	1/1:0,35:35:99:1574,105,0	0/0:34,0:34:96.31:0,96,1236	0/0:28,0:28:81.25:0,81,1037	1/1:0,31:31:81.15:1214,81,0	1/1:0,33:34:99:1517,102,0	1/1:1,32:33:93.31:1386,93,0	0/0:44,0:44:99:0,126,1607	0/0:16,0:16:48.16:0,48,623	0/0:23,0:23:66.21:0,66,857	0/0:25,0:25:72.19:0,72,915	1/1:1,22:23:66.21:968,66,0	1/1:0,24:24:69.23:1034,69,0	1/1:0,28:28:81.27:1214,81,0	1/1:0,30:30:87.29:1304,87,0	1/1:0,26:26:72.24:1079,72,0	1/1:1,22:23:63.21:944,63,0	0/0:16,0:16:48.16:0,48,622	1/1:3,39:42:99:1751,117,0	1/1:0,33:33:90.30:1349,90,0	1/1:0,5:5:15.05:225,15,0
chr10	90512113	.	CT	C	14998.66	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=14.233;DP=725;FS=0.000;HRun=3;HaplotypeScore=72.8512;InbreedingCoeff=0.9990;MQ=77.91;MQ0=0;MQRankSum=-6.343;QD=33.40;ReadPosRankSum=1.143;VQSLOD=5.2270;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,169,2397	0/0:8,0:8:24.08:0,24,346	0/0:22,0:22:57.17:0,57,785	0/0:22,0:22:44.35:0,44,659	1/1:1,29:30:78.24:964,78,0	1/1:0,25:25:69.22:855,69,0	1/1:1,24:25:63.20:781,63,0	1/1:2,37:39:99:1337,108,0	1/1:0,24:24:66.21:818,66,0	0/0:31,0:31:87.28:0,87,1229	0/0:11,0:11:27.08:0,27,370	1/1:1,37:38:99:1264,102,0	1/1:0,20:20:54.17:669,54,0	1/1:1,30:31:84.26:1041,84,0	0/0:24,0:24:66.22:0,66,950	0/0:34,0:34:99:0,102,1434	0/0:30,0:30:90.29:0,90,1277	0/0:18,0:18:54.17:0,54,757	1/1:0,22:22:66.21:818,66,0	1/1:2,28:30:84.26:1041,84,0	1/1:1,28:29:75.24:930,75,0	1/1:2,25:27:66.16:818,66,0	1/1:0,25:25:75.24:930,75,0	1/1:0,21:21:57.18:707,57,0	0/0:20,0:20:60.20:0,60,863	1/1:4,28:32:44.02:983,44,0	1/1:0,23:23:63.20:781,63,0	1/1:0,8:8:21.07:260,21,0
chr10	90513870	.	AC	A	15589.99	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=19.924;DP=770;FS=1.872;HRun=1;HaplotypeScore=119.2060;InbreedingCoeff=0.9905;MQ=84.39;MQ0=0;MQRankSum=-3.929;QD=32.82;ReadPosRankSum=1.632;VQSLOD=4.6609;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,166,2633	0/0:6,0:6:18.03:0,18,240	0/0:25,0:25:75.02:0,75,1111	0/0:28,0:28:57.48:0,57,963	1/1:0,21:21:54.17:648,54,0	1/1:0,32:32:90.28:1080,90,0	1/1:0,33:33:90.24:1065,90,0	1/1:5,35:41:99:1222,105,0	1/1:0,32:32:93.29:1116,93,0	0/0:23,0:23:69.24:0,69,1101	0/0:17,0:17:51.14:0,51,766	1/1:0,33:33:96.29:1152,96,0	1/1:2,25:27:78.17:908,78,0	1/1:5,27:32:90.24:1048,90,0	0/0:31,0:31:93.32:0,93,1486	0/0:32,0:32:96.31:0,96,1504	0/0:39,0:39:99:0,117,1815	0/0:16,0:15:48.13:0,48,740	1/1:1,21:22:63.16:723,63,0	1/1:1,23:24:69.17:812,69,0	1/1:1,28:29:78.21:921,78,0	1/1:2,23:25:72.21:853,72,0	1/1:4,19:23:60.17:707,60,0	1/1:0,31:31:90.28:1080,90,0	0/0:21,0:21:63.20:0,63,985	1/1:3,28:31:39.31:960,39,0	1/1:3,33:36:99:1187,99,0	1/1:0,3:3:9.03:108,9,0
chr10	90514246	.	T	TGTACACGGAGGAA	7434.42	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-2.768;DP=747;FS=10.921;HRun=0;HaplotypeScore=276.1336;InbreedingCoeff=0.9873;MQ=87.68;MQ0=0;MQRankSum=-10.822;QD=104.71;ReadPosRankSum=0.035;VQSLOD=3.5181;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,172,5868	1/1:6,3:10:21.07:1176,21,0	0/0:31,0:31:69.24:0,69,2023	0/0:23,0:23:48.10:0,48,1403	0/0:23,0:23:63.20:0,63,2118	0/0:18,0:18:42.11:0,42,1284	0/0:31,0:31:66.19:0,66,2204	0/0:37,0:37:72.22:0,72,2384	0/0:34,0:34:93.29:0,93,3150	0/0:31,0:31:84.28:0,84,2912	0/0:17,0:17:36.11:0,36,1283	0/0:31,0:31:81.26:0,81,2804	0/0:20,0:20:42.13:0,42,1482	0/0:20,0:20:54.19:0,54,2058	1/1:19,14:35:69.24:3971,69,0	0/0:30,0:30:84.27:0,84,3006	1/1:14,10:26:39.13:2288,39,0	0/0:24,0:24:57.11:0,57,1869	0/0:14,0:14:29.13:0,29,932	0/0:24,0:24:54.19:0,54,1989	0/0:55,0:55:99:0,147,5301	0/0:19,0:19:48.15:0,48,1537	0/0:16,0:16:37.83:0,38,1244	0/0:41,0:41:99:0,114,4302	0/0:17,0:17:42.14:0,42,1564	0/0:28,0:28:72.23:0,72,2468	0/0:28,0:28:63.20:0,63,2277	0/0:5,0:5:12.04:0,12,457
chr10	90514775	.	TTC	T	3503.61	PASS	AB=0.973;AC=40;AF=0.714;AN=56;BaseQRankSum=4.490;DP=532;FS=37.633;HRun=0;HaplotypeScore=103.5686;InbreedingCoeff=-0.0774;MQ=67.75;MQ0=1;MQRankSum=0.188;QD=6.90;ReadPosRankSum=9.457;VQSLOD=1.1745;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,2:34:5.14:183,5,0	1/1:10,2:12:6.27:147,6,0	0/0:13,0:10:17.93:0,18,283	0/0:11,0:10:0.52:0,1,187	0/1:14,1:15:34.38:92,0,34	1/1:25,0:25:18.13:184,18,0	0/1:20,2:22:3.12:214,0,3	0/1:30,1:31:10.89:270,0,11	0/1:16,0:16:0.54:49,0,1	1/1:12,1:13:0.56:130,1,0	0/1:17,0:17:7.16:106,0,7	0/1:20,0:20:1.32:96,0,1	1/1:16,0:16:25.91:89,26,0	1/1:14,0:14:23.36:88,23,0	1/1:25,1:26:50.44:204,50,0	0/1:23,0:23:21.97:117,0,22	0/1:19,1:20:35.51:87,0,36	1/1:16,1:17:31.45:138,31,0	0/1:24,0:24:11.95:196,0,12	1/1:23,0:22:14.28:124,14,0	0/1:20,1:21:13.09:190,0,13	0/1:13,0:13:0.23:70,0,0	1/1:14,0:14:23.14:89,23,0	1/1:19,0:19:35.55:122,36,0	0/1:15,1:16:29.88:73,0,30	1/1:24,2:26:14.45:218,14,0	1/1:24,0:24:6.91:198,7,0	1/1:7,0:7:9.45:32,9,0
chr10	90514776	.	TC	T	13268.60	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.227;DP=509;FS=6.385;HRun=2;HaplotypeScore=59.7530;InbreedingCoeff=0.9752;MQ=67.38;MQ0=1;MQRankSum=-3.453;QD=27.25;ReadPosRankSum=3.948;VQSLOD=4.2864;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:33:59.92:763,60,0	1/1:7,5:12:32.96:369,33,0	0/0:12,0:10:27.27:0,27,248	0/0:9,0:8:17.54:0,18,163	1/1:2,12:14:26.47:253,26,0	1/1:11,13:24:59.41:660,59,0	1/1:8,13:21:56.96:635,57,0	1/1:4,27:31:78.87:880,79,0	1/1:1,14:15:27.09:347,27,0	1/1:7,6:13:26.57:288,27,0	1/1:6,10:16:41.20:473,41,0	1/1:4,15:19:46.69:571,47,0	1/1:0,16:16:33.11:424,33,0	1/1:0,13:13:30.10:385,30,0	1/1:1,25:26:63.14:790,63,0	1/1:4,17:21:57.17:712,57,0	1/1:4,15:19:31.72:401,32,0	1/1:1,15:16:39.06:481,39,0	1/1:10,12:22:51.46:623,51,0	1/1:2,21:22:51.94:611,52,0	1/1:12,7:20:50.76:494,51,0	1/1:2,11:13:29.96:342,30,0	1/1:1,12:13:30.05:364,30,0	1/1:0,18:18:45.15:579,45,0	1/1:3,13:16:24.01:288,24,0	1/1:3,21:24:65.29:727,65,0	1/1:12,12:24:58.78:657,59,0	1/1:0,5:5:12.04:154,12,0
chr10	90515256	.	A	AGAT	2142.91	PASS	AB=0.754;AC=14;AF=0.250;AN=56;BaseQRankSum=-7.635;DP=444;FS=111.660;HRun=0;HaplotypeScore=87.8437;InbreedingCoeff=-0.0995;MQ=93.41;MQ0=0;MQRankSum=-6.652;QD=14.38;ReadPosRankSum=-1.980;VQSLOD=-0.4859;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,1648	0/0:10,0:10:24.08:0,24,392	0/0:25,0:25:51.91:0,52,769	0/0:26,0:26:54.08:0,54,767	1/1:13,0:13:2.68:11,3,0	0/1:10,2:12:97.33:97,0,415	0/1:4,1:5:57.55:58,0,106	0/1:12,10:22:99:488,0,338	0/1:7,3:10:99:116,0,153	0/0:28,0:28:78.26:0,78,1252	0/0:10,0:10:30.10:0,30,488	0/1:9,3:12:99:109,0,178	0/0:10,0:10:6.02:0,6,98	0/1:6,2:8:38.66:124,0,39	0/0:28,0:28:72.25:0,72,1174	0/0:24,0:24:69.21:0,69,1062	0/0:26,0:26:78.25:0,78,1240	0/0:14,0:14:42.14:0,42,686	0/1:6,12:18:99:603,0,142	0/1:7,5:12:99:222,0,106	1/1:1,2:3:3.01:67,3,0	0/0:7,1:8:2.59:0,3,35	0/0:22,0:22:12.04:0,12,154	0/0:3,3:6:6.02:0,6,84	0/0:19,0:19:54.17:0,54,858	0/1:9,8:17:99:294,0,322	0/1:13,4:17:99:107,0,233	0/0:2,0:2:6.02:0,6,98
chr10	90515311	.	C	CTG	1818.05	PASS	AB=0.530;AC=22;AF=0.393;AN=56;BaseQRankSum=11.869;DP=330;FS=130.454;HRun=0;HaplotypeScore=101.6357;InbreedingCoeff=0.4355;MQ=105.25;MQ0=0;MQRankSum=-10.676;QD=24.57;ReadPosRankSum=5.369;VQSLOD=0.4931;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.23:0,84,1292	0/0:12,0:12:33.11:0,33,533	0/0:25,0:25:31.14:0,31,957	0/0:22,0:22:53.94:0,54,797	0/1:0,7:7:8.31:176,0,8	0/1:1,3:4:1.19:102,0,1	1/1:1,2:3:6.02:77,6,0	0/0:1,0:1:2.96:0,3,19	1/1:1,6:7:8.97:216,9,0	0/0:29,0:29:81.28:0,81,1316	0/0:16,0:16:39.13:0,39,630	1/1:3,4:7:1.63:133,2,0	1/1:0,4:4:12.04:150,12,0	1/1:0,3:3:9.03:113,9,0	0/0:31,0:31:93.32:0,93,1512	0/0:34,1:35:64.43:0,64,1549	0/0:21,0:21:60.20:0,60,976	0/0:13,0:13:39.11:0,39,610	0/0:2,0:2:2.97:0,3,20	0/1:1,5:6:21.88:137,0,22	0/0:2,0:2:2.60:0,3,10	1/1:0,8:8:24.08:302,24,0	0/1:0,4:4:24.91:25,0,75	1/1:1,3:4:9.03:112,9,0	0/0:19,0:19:57.19:0,57,924	0/1:2,7:9:24.88:261,0,25	0/1:0,5:5:14.65:139,0,15	1/1:2,1:3:5.99:60,6,0
chr10	90515312	.	A	AACTGAGGTTAC	10737.53	PASS	AB=0.902;AC=29;AF=0.518;AN=56;BaseQRankSum=14.393;DP=402;FS=215.050;HRun=0;HaplotypeScore=182.2345;InbreedingCoeff=0.5099;MQ=95.44;MQ0=0;MQRankSum=-13.104;QD=58.68;ReadPosRankSum=4.353;VQSLOD=1.1858;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.29:0,84,2874	0/0:12,0:12:36.09:0,36,1156	0/0:24,0:24:65.25:0,65,2101	0/0:22,0:22:62.94:0,63,1891	1/1:3,7:10:7.84:827,8,0	1/1:5,2:8:4.60:526,5,0	1/1:10,2:12:14.97:686,15,0	0/1:7,0:7:4.16:228,0,4	1/1:3,6:9:19.93:965,20,0	0/0:29,0:29:84.26:0,84,2843	0/0:16,0:16:39.13:0,39,1273	1/1:7,4:11:19.79:885,20,0	1/1:2,4:6:12.01:618,12,0	1/1:4,3:7:20.56:747,21,0	0/0:32,0:32:93.32:0,93,3251	0/1:35,1:36:35.22:35,0,3337	0/0:21,0:21:63.19:0,63,2200	0/0:12,0:12:36.12:0,36,1312	0/1:5,0:5:9.62:185,0,10	1/1:5,5:10:0.42:718,0,0	0/0:3,0:3:3.85:0,4,10	1/1:4,7:12:9.80:1078,10,0	1/1:3,4:7:8.61:356,9,0	1/1:4,3:7:0.13:398,0,0	0/0:20,0:20:57.17:0,57,1969	0/1:8,7:15:80.57:1385,0,81	1/1:10,5:14:3.62:968,4,0	0/1:5,1:6:13.50:131,0,14
chr10	90515316	.	C	CTTAAT	8357.68	PASS	AB=0.696;AC=33;AF=0.589;AN=56;BaseQRankSum=13.683;DP=417;FS=248.273;HRun=0;HaplotypeScore=147.5462;InbreedingCoeff=0.9008;MQ=93.54;MQ0=0;MQRankSum=-15.380;QD=51.91;ReadPosRankSum=-0.728;VQSLOD=0.4042;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.26:0,87,1887	0/0:12,0:12:36.11:0,36,752	0/0:23,0:23:56.40:0,56,1282	0/0:21,0:22:63.20:0,63,1305	1/1:4,7:11:32.36:565,32,0	1/1:5,3:8:24.01:425,24,0	1/1:12,2:14:42.02:599,42,0	1/1:9,0:9:24.07:313,24,0	1/1:4,6:10:27.08:667,27,0	0/0:31,0:31:93.17:0,93,1950	0/0:16,0:16:42.05:0,42,880	1/1:7,4:11:27.02:549,27,0	1/1:3,4:7:21.04:429,21,0	1/1:4,3:7:21:426,21,0	0/0:32,0:32:96.27:0,96,2014	0/0:33,1:34:19.03:0,19,2095	0/0:24,0:24:66.20:0,66,1466	0/0:13,0:13:36.11:0,36,793	1/1:6,0:6:15.04:270,15,0	1/1:6,5:11:33.05:623,33,0	1/1:3,0:3:6.02:138,6,0	1/1:4,8:12:36.11:811,36,0	1/1:4,4:8:22.07:213,22,0	1/1:5,3:8:18.04:346,18,0	0/0:20,0:20:57.19:0,57,1265	0/1:9,7:16:24.76:978,0,25	1/1:10,5:14:44.93:823,45,0	1/1:4,1:5:12.01:182,12,0
chr10	90516023	.	AGTGTGTGTGTGTGTGT	A	1729.78	PASS	AC=12;AF=0.240;AN=50;BaseQRankSum=5.391;DP=444;FS=14.946;HRun=0;HaplotypeScore=180.3672;InbreedingCoeff=0.7503;MQ=61.99;MQ0=21;MQRankSum=-5.993;QD=20.84;ReadPosRankSum=-0.143;VQSLOD=1.2037;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:34.35:0,34,1279	1/1:4,3:7:9.03:323,9,0	./.	0/0:23,0:13:3:0,3,29	0/0:17,0:17:21.07:0,21,1198	0/0:24,0:24:36.46:0,36,2078	0/0:25,0:25:33.58:0,34,1582	0/0:29,0:27:30.06:0,30,1232	0/0:16,0:15:10.55:0,11,749	1/1:10,0:15:12.04:478,12,0	./.	0/0:6,0:5:6.02:0,6,322	0/0:10,0:9:9.03:0,9,477	0/0:18,0:18:14.75:0,15,740	1/1:11,6:21:6.02:231,6,0	1/1:5,0:13:9.03:371,9,0	1/1:7,6:11:3.01:130,3,0	1/1:11,1:11:9.03:353,9,0	0/0:18,0:18:23.57:0,24,938	0/0:17,0:16:9:0,9,446	0/0:17,0:15:12.47:0,12,220	0/0:12,0:12:15.05:0,15,871	0/0:7,0:6:3.01:0,3,132	0/0:22,0:21:33.11:0,33,1700	./.	0/0:20,0:18:42.13:0,42,2213	0/0:19,0:19:28.82:0,29,1436	0/0:6,0:5:9.03:0,9,411
chr10	90516294	.	TG	T	8692.26	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=17.234;DP=583;FS=5.050;HRun=5;HaplotypeScore=82.9153;InbreedingCoeff=0.8952;MQ=70.27;MQ0=0;MQRankSum=0.333;QD=25.57;ReadPosRankSum=1.107;VQSLOD=4.1864;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,155,1997	0/0:13,0:13:39.12:0,39,518	0/0:10,0:10:3.89:0,4,64	0/1:10,0:10:8.81:9,0,78	1/1:0,15:15:45.12:505,45,0	1/1:1,17:18:45.13:510,45,0	1/1:1,19:20:39.11:442,39,0	1/1:4,21:25:52.13:616,52,0	1/1:0,18:18:45.13:509,45,0	0/0:23,0:23:66.21:0,66,883	0/0:18,0:18:48.16:0,48,654	1/1:3,22:25:60.88:692,61,0	1/1:2,18:20:36.10:408,36,0	1/1:1,18:19:45.13:510,45,0	0/0:24,0:24:69.22:0,69,928	0/0:27,0:27:75.25:0,75,1021	0/0:27,0:26:81.27:0,81,1107	0/0:20,0:20:57.16:0,57,758	1/1:2,12:14:36.10:405,36,0	1/1:2,12:14:29.70:340,30,0	1/1:2,23:25:57.16:645,57,0	1/1:1,21:22:57.11:631,57,0	1/1:1,11:12:30.08:340,30,0	1/1:0,23:23:54.15:610,54,0	0/0:26,0:26:75.25:0,75,1022	1/1:3,29:32:49.20:941,49,0	1/1:0,23:23:45.13:510,45,0	1/1:0,4:4:6.02:68,6,0
chr10	90518209	.	AT	A	11894.96	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=17.656;DP=591;FS=0.318;HRun=5;HaplotypeScore=125.5841;InbreedingCoeff=0.9929;MQ=79.55;MQ0=0;MQRankSum=-1.821;QD=31.72;ReadPosRankSum=1.105;VQSLOD=3.4290;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.20:0,63,843	0/0:11,0:11:30.10:0,30,410	0/0:18,0:18:47.99:0,48,587	0/0:8,1:9:14.96:0,15,174	1/1:0,34:34:99:1157,102,0	1/1:1,25:26:72.21:817,72,0	1/1:0,14:14:39.11:442,39,0	1/1:1,37:38:99:1259,111,0	1/1:0,16:16:48.14:544,48,0	0/0:28,0:28:84.27:0,84,1136	0/0:24,0:24:66.22:0,66,903	1/1:0,9:9:27.08:306,27,0	1/1:1,18:19:51.15:579,51,0	1/1:2,11:13:33.09:374,33,0	0/0:25,0:25:72.24:0,72,979	0/0:23,1:23:38.20:0,38,910	0/0:17,0:16:45.14:0,45,599	0/0:16,0:16:45.15:0,45,615	1/1:0,21:21:63.15:702,63,0	1/1:0,31:31:90.26:1021,90,0	1/1:1,11:12:30.09:340,30,0	1/1:2,22:24:66.19:748,66,0	1/1:0,25:25:69.20:782,69,0	1/1:1,14:15:39.11:442,39,0	0/0:22,0:22:57.18:0,57,766	1/1:0,35:35:99:1156,102,0	1/1:1,34:34:96.27:1089,96,0	1/1:3,5:8:12.03:136,12,0
chr10	90518352	.	A	ATT	18395.73	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-16.916;DP=666;FS=15.877;HRun=6;HaplotypeScore=67.7430;InbreedingCoeff=0.9968;MQ=86.36;MQ0=1;MQRankSum=-3.435;QD=43.90;ReadPosRankSum=0.986;VQSLOD=3.2763;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:57.17:0,57,695	0/0:13,0:13:36.11:0,36,439	0/0:27,0:27:63.19:0,63,756	0/0:19,0:19:45.12:0,45,533	1/1:3,36:39:99:1797,108,0	1/1:1,23:24:66.23:1116,66,0	1/1:2,8:10:24.08:406,24,0	1/1:6,33:39:99:1649,99,0	1/1:1,15:18:45.15:761,45,0	0/0:24,0:24:66.20:0,66,803	0/0:20,0:20:45.12:0,45,549	1/1:0,21:21:54.18:913,54,0	1/1:3,21:24:66.23:1116,66,0	1/1:5,19:24:60.21:1008,60,0	0/0:39,0:39:99:0,114,1363	0/0:24,0:24:63.19:0,63,769	0/0:23,0:22:63.19:0,63,768	0/0:15,0:15:39.12:0,39,476	1/1:1,10:12:30.10:507,30,0	1/1:3,27:30:81.23:1316,81,0	1/1:4,15:19:45.15:742,45,0	1/1:1,24:26:72.25:1218,72,0	1/1:1,22:26:63.22:1066,63,0	1/1:2,19:21:57.20:964,57,0	0/0:20,0:20:57.18:0,57,695	1/1:4,27:31:14.09:1280,14,0	1/1:1,42:43:99:1979,117,0	1/1:0,11:11:33.11:558,33,0
chr10	90520077	.	C	CTTATTTT	14103.42	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-4.124;DP=450;FS=7.726;HRun=0;HaplotypeScore=98.7587;InbreedingCoeff=0.8830;MQ=64.63;MQ0=0;MQRankSum=-11.466;QD=55.09;ReadPosRankSum=-1.505;VQSLOD=3.8607;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:57.17:0,57,1292	0/0:15,0:15:42.10:0,42,888	0/1:13,0:11:2.28:2,0,326	0/0:10,0:10:19.40:0,19,283	1/1:11,18:34:51.10:1698,51,0	1/1:6,16:23:42.14:1582,42,0	1/1:2,2:6:6.02:226,6,0	1/1:11,12:33:66.19:2077,66,0	1/1:2,8:10:18.06:679,18,0	0/0:20,0:20:48.15:0,48,989	0/0:27,0:26:72.23:0,72,1635	1/1:2,6:13:12.04:452,12,0	1/1:6,8:14:21.07:791,21,0	1/1:6,0:6:9.03:235,9,0	0/0:18,0:18:45.12:0,45,947	0/0:12,0:12:24.08:0,24,545	0/0:27,0:27:63.17:0,63,1390	0/0:18,0:18:45.15:0,45,1058	1/1:9,7:15:21.07:774,21,0	1/1:3,8:12:30.03:935,30,0	1/1:3,3:7:9.03:302,9,0	1/1:5,2:10:8.99:246,9,0	1/1:1,4:7:12.04:444,12,0	1/1:2,2:5:6.49:226,6,0	0/0:22,0:22:63.22:0,63,1479	1/1:3,12:20:51.14:1630,51,0	1/1:4,12:20:36.12:1356,36,0	1/1:3,3:7:12.04:450,12,0
chr10	90520643	.	T	TC	15761.33	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=1.295;DP=654;FS=0.964;HRun=2;HaplotypeScore=75.3156;InbreedingCoeff=0.9997;MQ=81.92;MQ0=0;MQRankSum=-4.080;QD=39.01;ReadPosRankSum=-0.367;VQSLOD=5.1053;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,150,1946	0/0:11,0:11:33.11:0,33,427	0/0:23,0:23:50.38:0,50,722	0/0:19,0:19:54.16:0,54,686	1/1:2,26:28:60.16:874,60,0	1/1:0,29:29:72.24:1073,72,0	1/1:0,24:24:63.21:944,63,0	1/1:8,17:25:59.41:857,59,0	1/1:1,25:26:66.22:988,66,0	0/0:14,0:14:42.14:0,42,545	0/0:16,0:16:47.52:0,48,592	1/1:0,18:18:54.18:804,54,0	1/1:0,24:24:69.23:1034,69,0	1/1:2,20:22:60.20:899,60,0	0/0:26,0:26:78.25:0,78,1008	0/0:24,1:25:27.27:0,27,834	0/0:24,0:24:72.22:0,72,917	0/0:20,0:20:54.14:0,54,683	1/1:0,23:23:69.11:924,69,0	1/1:1,19:20:51.17:763,51,0	1/1:0,39:39:99:1663,111,0	1/1:0,20:20:57.19:854,57,0	1/1:0,15:15:36.12:539,36,0	1/1:1,29:30:78.26:1163,78,0	0/0:20,0:20:57.19:0,57,740	1/1:3,25:28:39.30:1079,39,0	1/1:2,20:22:57.19:854,57,0	1/1:0,11:11:30.10:449,30,0
chr10	90521175	.	AAC	A	1378.69	PASS	AB=0.851;AC=29;AF=0.659;AN=44;BaseQRankSum=-0.751;DP=547;FS=10.209;HRun=0;HaplotypeScore=84.1945;InbreedingCoeff=0.4068;MQ=62.77;MQ0=20;MQRankSum=2.904;QD=4.39;ReadPosRankSum=0.742;VQSLOD=1.5870;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:30:26.97:0,27,260	0/0:4,0:4:3:0,3,27	./.	./.	0/1:9,3:12:35:42,0,35	1/1:23,0:22:11.83:90,12,0	1/1:24,1:25:5.85:46,6,0	./.	1/1:21,1:21:11.91:120,12,0	./.	1/1:10,0:14:5.68:28,6,0	1/1:10,3:13:5.80:63,6,0	1/1:12,6:18:19.15:202,19,0	0/1:21,0:23:41.09:110,0,41	0/0:22,0:31:17.65:0,18,151	1/1:17,0:21:14.10:70,14,0	0/0:14,0:12:6.43:0,6,46	1/1:13,0:14:2.71:14,3,0	1/1:19,0:19:2.28:21,2,0	1/1:7,0:7:6.01:59,6,0	1/1:26,9:32:12.50:128,12,0	0/0:10,0:10:3.01:0,3,35	./.	1/1:28,13:42:29.76:282,30,0	./.	0/0:20,0:19:2.57:0,3,36	1/1:13,4:17:23.94:230,24,0	0/1:4,1:5:16.61:26,0,17
chr10	90521887	.	C	CT	736.48	PASS	AB=0.736;AC=15;AF=0.750;AN=20;BaseQRankSum=-4.346;DP=188;FS=25.499;HRun=13;HaplotypeScore=45.1712;InbreedingCoeff=0.0806;MQ=63.92;MQ0=33;MQRankSum=1.351;QD=5.67;ReadPosRankSum=-1.058;VQSLOD=0.0832;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:29:35.08:0,35,101	1/1:2,2:4:5.93:45,6,0	0/1:17,0:7:7.12:7,0,10	./.	./.	./.	./.	./.	./.	1/1:6,11:14:4.34:162,4,0	1/1:2,8:9:12.01:111,12,0	./.	./.	./.	1/1:4,6:9:3:28,3,0	0/1:7,11:16:20.72:94,0,21	1/1:13,17:27:0.56:266,1,0	0/1:2,6:10:9.65:10,0,15	./.	./.	./.	./.	./.	./.	1/1:4,7:11:11.19:110,11,0	./.	./.	./.
chr10	90522513	.	G	GA	6417.46	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=8.731;DP=383;FS=0.000;HRun=8;HaplotypeScore=71.7695;InbreedingCoeff=0.8944;MQ=65.10;MQ0=0;MQRankSum=-2.944;QD=26.74;ReadPosRankSum=-0.408;VQSLOD=5.1223;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:48.02:0,48,439	0/0:1,0:1:3:0,3,27	0/0:11,0:11:2.25:0,2,125	0/0:11,0:11:0.92:0,1,125	1/1:2,14:16:11.67:388,12,0	1/1:5,11:15:30.08:346,30,0	1/1:4,6:10:27.08:310,27,0	1/1:8,26:34:75.18:851,75,0	1/1:2,15:16:39.07:435,39,0	0/0:13,0:12:36.02:0,36,329	0/0:9,0:9:27.01:0,27,247	1/1:1,5:6:11.99:124,12,0	1/1:2,8:11:27.08:305,27,0	1/1:2,10:12:27.04:297,27,0	0/0:13,0:13:30.02:0,30,275	0/0:14,0:14:27.01:0,27,247	0/0:20,0:20:48.02:0,48,439	0/0:20,0:19:53.94:0,54,477	1/1:2,8:10:27.08:311,27,0	1/1:3,13:16:39.12:450,39,0	1/1:0,5:5:12.04:138,12,0	1/1:1,8:9:15.04:173,15,0	1/1:3,13:16:39.08:436,39,0	1/1:2,9:11:27.08:312,27,0	0/0:11,0:11:24.01:0,24,219	1/1:1,18:19:54.16:623,54,0	1/1:3,19:21:51.15:588,51,0	1/1:1,9:10:30.05:331,30,0
chr10	90522590	.	C	CTTT	3884.49	PASS	AB=0.697;AC=46;AF=0.821;AN=56;BaseQRankSum=2.107;DP=415;FS=3.390;HRun=12;HaplotypeScore=89.9619;InbreedingCoeff=0.4477;MQ=68.15;MQ0=1;MQRankSum=-1.459;QD=10.33;ReadPosRankSum=0.198;VQSLOD=0.9436;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:19:41.90:0,42,424	1/1:0,2:4:6.02:110,6,0	0/1:18,0:9:2.63:41,0,3	0/0:13,0:7:4.01:0,4,19	1/1:7,0:11:13.93:81,14,0	1/1:3,0:23:21.29:52,21,0	1/1:2,0:10:7.48:17,7,0	0/1:9,0:28:0.64:73,0,1	1/1:2,0:8:4.62:10,5,0	1/1:10,3:14:35.66:426,36,0	1/1:7,9:20:34.24:481,34,0	1/1:2,0:6:6.80:17,7,0	1/1:3,0:14:8.18:21,8,0	1/1:4,0:10:12.96:51,13,0	1/1:5,9:14:21.14:381,21,0	1/1:4,13:18:30.08:489,30,0	1/1:6,13:23:27.07:463,27,0	1/1:4,20:25:33.11:603,33,0	1/1:5,0:24:30.84:120,31,0	1/1:7,0:14:16.27:76,16,0	0/1:1,0:3:0.06:0,0,28	1/1:1,0:7:7.48:17,7,0	1/1:3,0:12:13.83:46,14,0	0/0:3,0:6:1:0,1,59	1/1:2,10:14:11.99:166,12,0	1/1:8,0:23:22.90:66,23,0	1/1:7,0:15:14.78:52,15,0	0/1:4,0:10:19.29:27,0,19
chr10	90523600	.	A	ACTT	20925.32	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.265;DP=478;FS=18.930;HRun=0;HaplotypeScore=81.5647;InbreedingCoeff=0.9617;MQ=61.06;MQ0=0;MQRankSum=-3.788;QD=46.92;ReadPosRankSum=3.835;VQSLOD=5.4526;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,11:18:39.12:706,39,0	1/1:2,11:13:33.11:689,33,0	0/0:20,0:16:18.47:0,18,470	0/0:10,0:10:11.81:0,12,154	1/1:3,22:25:63.21:1314,63,0	1/1:0,9:9:27.09:588,27,0	1/1:3,14:17:42.14:901,42,0	1/1:7,15:23:48.12:877,48,0	1/1:3,19:21:54.14:1142,54,0	1/1:6,18:22:54.12:1078,54,0	1/1:6,12:17:42.13:848,42,0	1/1:5,11:16:33.11:688,33,0	1/1:2,16:20:33.11:713,33,0	1/1:4,12:16:39.13:836,39,0	1/1:10,12:22:57.13:1075,57,0	1/1:7,11:17:39.13:795,39,0	1/1:7,15:22:63.19:1278,63,0	1/1:6,11:17:48.16:970,48,0	1/1:12,11:24:42.09:772,42,0	1/1:4,6:11:18.06:374,18,0	1/1:2,14:16:36.12:804,36,0	1/1:0,6:6:18.02:340,18,0	1/1:2,8:10:21.07:446,21,0	1/1:2,9:11:21.07:469,21,0	1/1:3,13:16:45.15:918,45,0	1/1:5,13:18:45.15:935,45,0	1/1:1,17:20:45.15:971,45,0	1/1:2,12:14:18.06:402,18,0
chr10	90523605	.	A	ATT	3527.57	PASS	AB=0.968;AC=23;AF=0.411;AN=56;BaseQRankSum=3.350;DP=469;FS=0.000;HRun=11;HaplotypeScore=131.4669;InbreedingCoeff=0.6070;MQ=58.96;MQ0=3;MQRankSum=-6.953;QD=14.05;ReadPosRankSum=-1.253;VQSLOD=1.5943;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:14.63:100,15,0	1/1:2,0:11:27.86:185,28,0	0/1:22,0:16:10.16:10,0,100	0/0:9,0:7:2.78:0,3,19	0/0:24,0:25:22.43:0,22,275	0/1:12,0:14:9.02:9,0,128	0/0:16,0:16:6.08:0,6,90	0/0:18,0:19:45.82:0,46,373	0/0:21,0:20:37.45:0,37,233	1/1:9,12:20:42.91:511,43,0	1/1:3,10:13:36.09:454,36,0	0/1:13,0:13:0.57:1,0,105	0/0:23,0:23:27.25:0,27,151	0/0:16,0:16:8.11:0,8,119	1/1:10,2:23:22.47:299,22,0	1/1:4,14:20:45.85:538,46,0	1/1:9,0:23:47.85:315,48,0	1/1:9,9:20:42.95:509,43,0	0/0:16,0:18:3.64:0,4,169	0/0:9,0:9:23.73:0,24,176	0/0:16,0:16:39.89:0,40,256	0/0:5,0:5:1.86:0,2,50	0/1:9,0:10:9.61:10,0,70	0/0:9,0:9:17.70:0,18,95	1/1:1,15:18:47.59:587,48,0	0/1:20,0:20:0.98:1,0,215	0/0:20,0:20:18.43:0,18,120	0/0:11,0:11:9.47:0,9,68
chr10	90523615	.	TTG	T	83.09	PASS	AB=0.886;AC=4;AF=0.071;AN=56;BaseQRankSum=2.700;DP=485;FS=3.066;HRun=0;HaplotypeScore=133.7877;InbreedingCoeff=0.3251;MQ=59.36;MQ0=4;MQRankSum=-3.997;QD=1.77;ReadPosRankSum=-4.576;VQSLOD=0.2297;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:6.65:67,7,0	0/0:10,0:10:21.45:0,21,223	0/0:28,0:16:25.26:0,25,243	0/0:15,0:8:8.41:0,8,65	0/0:25,0:25:69.42:0,69,921	0/0:15,0:15:44.79:0,45,602	0/0:14,0:14:42.08:0,42,574	0/0:22,0:21:62.60:0,63,826	0/0:21,0:20:60.06:0,60,863	0/0:21,0:19:40.58:0,41,396	0/1:11,2:12:27.34:27,0,260	0/0:13,0:13:39.06:0,39,525	0/0:20,0:20:46.13:0,46,611	0/0:19,0:19:57.12:0,57,771	0/0:25,1:26:43.78:0,44,591	0/0:20,0:19:42.06:0,42,395	0/0:23,0:23:40.08:0,40,568	0/1:17,2:19:94.13:94,0,245	0/0:20,0:20:53.79:0,54,668	0/0:10,0:10:27.02:0,27,405	0/0:15,0:15:42.11:0,42,623	0/0:4,0:4:2.07:0,2,136	0/0:9,0:9:24.08:0,24,369	0/0:11,0:11:20.98:0,21,306	0/0:22,0:22:38.66:0,39,517	0/0:21,0:21:38.84:0,39,720	0/0:22,0:22:48.94:0,49,681	0/0:12,0:12:29.44:0,29,406
chr10	90523889	.	C	CTTAT	4282.35	PASS	AC=32;AF=0.615;AN=52;BaseQRankSum=0.855;DP=290;FS=8.951;HRun=0;HaplotypeScore=75.0323;InbreedingCoeff=0.7765;MQ=69.98;MQ0=0;MQRankSum=-8.156;QD=28.74;ReadPosRankSum=-2.193;VQSLOD=3.5309;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:1:3.01:41,3,0	0/0:7,0:7:18.06:0,18,301	0/0:14,0:11:14.51:0,15,162	0/0:8,0:7:9.03:0,9,117	1/1:9,9:19:27.09:664,27,0	1/1:4,6:10:18.06:443,18,0	1/1:1,3:5:3.01:74,3,0	1/1:8,8:19:33.06:595,33,0	1/1:2,3:7:6.02:148,6,0	0/0:8,0:8:18.06:0,18,301	0/0:17,0:17:18.06:0,18,301	./.	1/1:4,1:5:3.01:74,3,0	1/1:3,7:9:18.06:443,18,0	0/0:12,0:12:21.03:0,21,318	0/0:9,0:9:12.04:0,12,201	0/0:28,0:28:51.09:0,51,767	0/0:20,0:20:39.13:0,39,639	1/1:10,1:10:3.01:74,3,0	1/1:4,4:8:9.03:221,9,0	1/1:7,0:7:3:25,3,0	1/1:2,1:3:3.01:74,3,0	1/1:1,4:6:9.03:220,9,0	./.	0/0:12,0:12:24.07:0,24,378	1/1:8,4:12:18.06:412,18,0	1/1:8,7:15:24.08:553,24,0	1/1:5,3:10:9.03:222,9,0
chr10	90524507	.	CGTCTACA	C	37751.32	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.902;DP=695;FS=2.704;HRun=0;HaplotypeScore=198.2439;InbreedingCoeff=0.9935;MQ=76.48;MQ0=0;MQRankSum=-11.355;QD=58.53;ReadPosRankSum=6.559;VQSLOD=4.8782;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,33:38:87.25:2094,87,0	1/1:1,13:14:36.04:840,36,0	0/0:23,0:23:63.19:0,63,2135	0/0:27,0:27:78.23:0,78,2672	1/1:1,31:32:78.15:1674,78,0	1/1:0,31:31:72.25:1865,72,0	1/1:3,16:19:45.15:1136,45,0	1/1:5,22:27:63.22:1634,63,0	1/1:3,20:23:57.19:1377,57,0	1/1:1,22:23:66.23:1619,66,0	1/1:2,24:26:54.14:1311,54,0	1/1:4,26:30:69.24:1752,69,0	1/1:1,33:34:84.29:2148,84,0	1/1:2,18:20:39.13:981,39,0	1/1:2,29:31:84.29:2168,84,0	1/1:5,31:36:87.30:2255,87,0	1/1:2,18:20:38.64:953,39,0	1/1:1,6:7:18.06:441,18,0	1/1:2,16:18:48.16:1185,48,0	1/1:1,28:29:72.25:1612,72,0	1/1:3,17:20:33.11:747,33,0	1/1:0,33:33:84.20:1932,84,0	1/1:1,17:18:48.16:1137,48,0	1/1:2,21:23:41.79:960,42,0	1/1:2,20:22:54.19:1400,54,0	1/1:5,19:24:51.17:1322,51,0	1/1:2,38:40:99:2686,105,0	1/1:0,7:7:21.07:520,21,0
chr10	90525004	.	CT	C	2997.94	PASS	AB=0.706;AC=41;AF=0.732;AN=56;BaseQRankSum=3.986;DP=534;FS=11.151;HRun=15;HaplotypeScore=134.6377;InbreedingCoeff=0.1096;MQ=56.74;MQ0=4;MQRankSum=-2.390;QD=6.41;ReadPosRankSum=2.411;VQSLOD=1.2541;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,3:42:5.04:0,5,394	1/1:2,6:8:17.69:115,18,0	0/0:11,0:8:5.32:0,5,46	0/0:12,0:6:0:0,0,0	1/1:10,9:21:25.18:137,25,0	1/1:8,8:16:23.50:154,24,0	1/1:11,8:20:0.57:105,1,0	1/1:18,10:27:33.21:202,33,0	1/1:9,6:14:11.68:76,12,0	0/1:11,8:19:23.97:114,0,24	0/1:13,6:21:4.08:53,0,4	0/1:10,5:16:12.68:49,0,13	0/1:10,5:16:10.57:53,0,11	1/1:3,12:17:21.78:127,22,0	1/1:8,10:19:28.51:179,29,0	0/1:7,10:17:22.73:108,0,23	1/1:8,20:26:43.80:288,44,0	1/1:9,9:18:19.48:183,19,0	0/1:13,5:19:2.73:79,0,3	1/1:11,9:23:15.59:157,16,0	1/1:7,5:11:8.78:58,9,0	1/1:9,10:20:26.16:163,26,0	1/1:9,8:19:24.35:160,24,0	0/1:11,10:21:1.44:126,0,1	1/1:4,6:10:14.65:96,15,0	0/1:13,8:22:0.67:115,0,1	0/1:10,8:18:2.16:82,0,2	1/1:8,8:17:25.63:159,26,0
chr10	90526948	.	G	GA	7114.36	PASS	AB=0.773;AC=24;AF=0.429;AN=56;BaseQRankSum=15.401;DP=758;FS=2.630;HRun=0;HaplotypeScore=126.6804;InbreedingCoeff=-0.7504;MQ=77.73;MQ0=0;MQRankSum=-14.183;QD=10.89;ReadPosRankSum=-1.868;VQSLOD=5.1182;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,1593	0/1:7,5:12:99:199,0,261	0/0:23,0:23:63.18:0,63,835	0/0:25,0:25:60:0,60,751	0/1:17,7:24:99:248,0,469	0/1:17,8:25:99:266,0,521	0/1:25,5:30:99:199,0,837	0/1:37,14:51:99:603,0,1160	0/1:12,5:17:99:234,0,354	0/1:29,15:44:99:650,0,999	0/1:18,5:23:43.20:43,0,564	0/1:18,10:28:99:390,0,631	0/1:19,6:25:99:206,0,653	0/1:17,6:23:99:217,0,604	0/1:23,8:31:99:288,0,798	0/1:22,17:39:99:688,0,744	0/1:11,4:15:99:197,0,289	0/1:11,9:20:99:154,0,299	0/1:22,5:27:99:204,0,750	0/1:27,9:36:99:281,0,909	0/1:21,9:30:99:205,0,643	0/1:9,9:18:99:370,0,323	0/1:19,3:22:77.37:77,0,671	0/0:12,4:16:20.81:0,21,293	0/1:15,16:31:99:628,0,510	0/1:23,15:38:99:602,0,821	0/1:22,4:26:73.02:73,0,749	0/1:14,4:18:91.65:92,0,535
chr10	90528955	.	T	TA	2181.32	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.417;DP=188;FS=1.963;HRun=8;HaplotypeScore=46.3549;InbreedingCoeff=0.4949;MQ=63.48;MQ0=0;MQRankSum=-3.417;QD=12.05;ReadPosRankSum=0.921;VQSLOD=2.1581;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:25:60.18:692,60,0	1/1:2,0:2:5.36:22,5,0	0/0:3,0:2:5.99:0,6,50	0/0:4,0:3:5.88:0,6,43	1/1:6,0:6:13.51:57,14,0	1/1:8,0:8:21.46:95,21,0	1/1:7,0:7:16.07:66,16,0	1/1:30,0:30:72.32:299,72,0	1/1:6,0:6:16.07:66,16,0	1/1:4,0:4:10.71:44,11,0	1/1:4,0:4:10.71:44,11,0	1/1:8,0:8:19.36:100,19,0	1/1:3,0:3:8.04:33,8,0	1/1:3,0:3:8.15:35,8,0	1/1:4,0:3:8.04:33,8,0	1/1:6,0:6:16.07:66,16,0	1/1:12,0:12:26.78:111,27,0	1/1:10,0:10:24.11:99,24,0	1/1:9,0:9:21.43:89,21,0	1/1:4,0:4:8.04:33,8,0	1/1:2,0:2:5.36:22,5,0	1/1:3,0:3:7.51:30,8,0	1/1:2,0:2:5.36:22,5,0	1/1:2,0:2:5.36:22,5,0	1/1:6,0:5:13.39:55,13,0	1/1:9,0:8:20.81:88,21,0	1/1:5,0:5:13.39:56,13,0	1/1:1,0:1:2.68:11,3,0
chr10	90528958	.	A	AAC	7666.13	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-4.370;DP=194;FS=3.878;HRun=0;HaplotypeScore=32.4854;InbreedingCoeff=0.6269;MQ=65.61;MQ0=0;MQRankSum=-3.857;QD=47.32;ReadPosRankSum=-0.431;VQSLOD=5.2118;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:53.40:0,53,222	1/1:0,2:2:6.02:108,6,0	0/0:4,0:3:6.01:0,6,72	0/0:4,0:3:6.02:0,6,92	1/1:0,6:6:15.05:266,15,0	1/1:1,8:9:24.08:419,24,0	1/1:0,7:7:18.06:323,18,0	1/1:0,30:30:90.23:1522,90,0	1/1:0,6:6:18.06:323,18,0	1/1:1,4:4:12.04:216,12,0	1/1:0,4:4:12.04:215,12,0	1/1:0,7:8:20.66:316,21,0	1/1:0,3:3:9.03:161,9,0	1/1:0,3:3:9.03:159,9,0	1/1:1,4:4:5.40:156,5,0	1/1:1,6:7:21.04:345,21,0	1/1:0,12:12:30.10:537,30,0	1/1:1,9:10:27.09:483,27,0	1/1:2,8:10:30.07:479,30,0	1/1:0,4:4:9.03:161,9,0	1/1:0,2:2:6.02:107,6,0	1/1:0,3:3:9.03:152,9,0	1/1:0,2:2:6.02:107,6,0	1/1:0,2:2:6.02:108,6,0	1/1:0,6:5:15.05:269,15,0	1/1:2,8:9:24.08:414,24,0	1/1:0,5:5:15.05:268,15,0	1/1:0,1:1:3.01:54,3,0
chr10	90529019	.	CTAT	C	5229.57	PASS	AB=0.600;AC=45;AF=0.865;AN=52;BaseQRankSum=6.024;DP=220;FS=1.997;HRun=0;HaplotypeScore=54.6833;InbreedingCoeff=0.5212;MQ=49.71;MQ0=2;MQRankSum=-2.316;QD=27.52;ReadPosRankSum=0.478;VQSLOD=4.7908;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.18:0,60,1089	1/1:2,0:2:2.99:23,3,0	0/0:2,0:1:3.01:0,3,47	0/0:2,0:1:3.01:0,3,61	1/1:3,5:8:20.94:238,21,0	1/1:5,9:14:38.94:465,39,0	1/1:3,1:4:12.02:147,12,0	1/1:12,22:33:66.05:812,66,0	1/1:4,3:7:20.93:214,21,0	1/1:1,3:4:9.03:132,9,0	1/1:3,2:5:5.84:66,6,0	1/1:3,3:6:18.01:195,18,0	1/1:1,4:5:12.04:159,12,0	0/1:1,2:3:16.38:52,0,16	1/1:3,3:5:15.03:182,15,0	1/1:3,9:12:33.03:439,33,0	1/1:6,5:11:15.05:219,15,0	1/1:7,5:11:21.03:255,21,0	1/1:6,3:7:17.97:207,18,0	1/1:1,1:2:5.98:58,6,0	1/1:1,3:4:6.02:88,6,0	1/1:1,1:2:6.02:77,6,0	./.	./.	1/1:2,10:11:27.09:390,27,0	1/1:7,4:11:24.01:292,24,0	1/1:5,7:12:27.04:344,27,0	1/1:1,4:5:12.04:177,12,0
chr10	90529079	.	C	CCTGG	16397.04	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-5.445;DP=325;FS=7.648;HRun=0;HaplotypeScore=60.0360;InbreedingCoeff=0.8261;MQ=74.38;MQ0=0;MQRankSum=-9.293;QD=65.33;ReadPosRankSum=2.322;VQSLOD=6.8635;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1982	1/1:1,0:1:3.01:46,3,0	0/0:17,0:17:45.14:0,45,796	0/0:20,0:20:57.18:0,57,965	1/1:1,12:13:27.09:727,27,0	1/1:3,11:14:36.08:909,36,0	1/1:1,13:14:39.09:991,39,0	1/1:7,16:23:57.20:1456,57,0	1/1:2,6:9:24.07:585,24,0	1/1:2,7:9:24.08:647,24,0	1/1:0,5:5:12.04:323,12,0	1/1:1,7:9:24.08:624,24,0	1/1:2,7:9:24.08:639,24,0	1/1:1,13:14:39.13:1043,39,0	1/1:1,5:6:15.01:343,15,0	1/1:4,9:13:36.08:901,36,0	1/1:3,10:13:33.11:880,33,0	1/1:2,6:8:24.06:537,24,0	1/1:2,10:12:36.12:939,36,0	1/1:0,8:8:17.74:485,18,0	1/1:3,16:19:45.07:1092,45,0	1/1:0,2:2:6.02:162,6,0	1/1:0,3:3:6.02:162,6,0	1/1:3,1:7:6.02:154,6,0	1/1:0,8:8:24.08:647,24,0	1/1:1,7:8:24.08:648,24,0	1/1:1,11:13:29.95:809,30,0	1/1:1,10:11:24.08:647,24,0
chr10	90529424	.	AAG	A	3057.97	PASS	AB=1.000;AC=52;AF=0.929;AN=56;BaseQRankSum=3.037;DP=411;FS=41.695;HRun=0;HaplotypeScore=70.9792;InbreedingCoeff=0.1736;MQ=60.37;MQ0=14;MQRankSum=1.798;QD=7.44;ReadPosRankSum=-0.615;VQSLOD=1.1534;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:4.28:4,0,338	1/1:2,3:4:8.90:71,9,0	0/1:33,0:9:1.93:2,0,13	0/1:32,0:9:8.22:8,0,10	1/1:21,1:21:19.45:202,19,0	1/1:15,1:16:31.23:196,31,0	1/1:8,0:7:6.54:92,7,0	1/1:27,0:26:48.68:332,49,0	1/1:8,1:9:14.94:122,15,0	1/1:17,1:18:25.73:189,26,0	1/1:15,0:14:22.18:121,22,0	1/1:9,1:9:16.95:95,17,0	1/1:4,0:4:10.86:54,11,0	1/1:8,0:7:10.69:47,11,0	1/1:8,0:8:18.31:88,18,0	1/1:11,0:10:1.69:65,2,0	1/1:23,0:22:29.30:202,29,0	1/1:14,0:14:34.63:185,35,0	1/1:17,1:18:13.17:133,13,0	1/1:16,1:17:20.57:141,21,0	1/1:9,1:10:7.42:42,7,0	1/1:3,0:3:5.93:41,6,0	0/1:7,0:7:12.52:13,0,16	1/1:5,1:6:11.93:98,12,0	1/1:15,1:16:11.30:136,11,0	1/1:15,2:17:32.42:189,32,0	1/1:14,1:14:26.25:186,26,0	1/1:13,1:13:14.66:116,15,0
chr10	90529425	.	AG	A	3949.78	PASS	AB=0.877;AC=52;AF=0.929;AN=56;BaseQRankSum=2.473;DP=414;FS=35.912;HRun=1;HaplotypeScore=64.0512;InbreedingCoeff=0.1252;MQ=60.46;MQ0=13;MQRankSum=0.336;QD=9.54;ReadPosRankSum=-0.555;VQSLOD=-0.6958;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:43.24:43,0,228	1/1:4,1:4:8.91:76,9,0	0/1:33,0:9:1.33:1,0,17	0/1:31,1:9:5.32:8,0,5	1/1:21,2:22:25.90:225,26,0	1/1:15,1:16:42.47:236,42,0	1/1:4,4:7:9.31:141,9,0	1/1:3,24:26:54.01:372,54,0	1/1:1,8:9:15:150,15,0	1/1:16,3:19:40.25:242,40,0	1/1:1,13:14:22.56:152,23,0	1/1:10,0:9:19.47:92,19,0	1/1:4,0:4:10.86:54,11,0	1/1:8,0:7:13.91:66,14,0	1/1:8,0:8:18.45:91,18,0	1/1:9,2:10:8.39:128,8,0	1/1:1,22:22:29.79:318,30,0	1/1:11,4:15:40:272,40,0	1/1:19,0:19:26.50:184,27,0	1/1:1,15:16:20.63:150,21,0	1/1:2,8:10:8.84:66,9,0	1/1:0,3:3:5.95:49,6,0	0/1:1,6:7:8.50:31,0,8	1/1:1,5:6:12:121,12,0	1/1:2,14:16:13.96:156,14,0	1/1:17,1:18:35.45:210,35,0	1/1:14,1:14:26.25:191,26,0	1/1:2,12:13:14.67:123,15,0
chr10	90529426	.	G	GA	5440.56	PASS	AB=1.000;AC=52;AF=0.929;AN=56;BaseQRankSum=-1.623;DP=419;FS=12.501;HRun=18;HaplotypeScore=60.0012;InbreedingCoeff=0.4225;MQ=61.60;MQ0=13;MQRankSum=-1.267;QD=13.88;ReadPosRankSum=-0.663;VQSLOD=3.3949;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:34.40:0,34,315	1/1:5,0:4:8.99:75,9,0	0/1:33,0:10:3.48:3,0,73	0/1:32,0:9:4.13:14,0,4	1/1:24,0:23:30.02:298,30,0	1/1:15,0:15:31.65:301,32,0	1/1:8,0:7:18.05:199,18,0	1/1:28,0:27:63.63:699,64,0	1/1:10,0:10:15.02:154,15,0	1/1:18,1:19:47.22:476,47,0	1/1:13,1:14:20.97:200,21,0	1/1:9,0:8:16.40:176,16,0	1/1:4,0:4:9.03:104,9,0	1/1:8,0:7:7.38:72,7,0	1/1:7,0:7:9.50:105,9,0	1/1:11,0:10:21.61:191,22,0	1/1:23,0:22:28.51:260,29,0	1/1:14,1:15:35.38:325,35,0	1/1:18,1:19:36.03:388,36,0	1/1:16,0:16:18.01:176,18,0	1/1:10,0:10:9.02:99,9,0	1/1:3,0:3:3.01:34,3,0	1/1:7,0:7:2.92:17,3,0	1/1:6,0:6:11.97:107,12,0	1/1:16,0:16:18.01:183,18,0	1/1:19,0:19:42.50:430,42,0	1/1:13,3:15:23.56:231,24,0	1/1:14,0:13:9.89:122,10,0
chr10	90529430	.	A	AA	5407.02	PASS	AB=1.000;AC=52;AF=0.929;AN=56;BaseQRankSum=-1.678;DP=426;FS=12.580;HRun=4;HaplotypeScore=59.1150;InbreedingCoeff=0.4216;MQ=63.02;MQ0=13;MQRankSum=0.484;QD=13.52;ReadPosRankSum=-1.021;VQSLOD=2.4290;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:34.40:0,34,315	1/1:5,0:4:8.99:75,9,0	0/1:35,0:11:3.51:4,0,73	0/1:32,0:9:4.13:14,0,4	1/1:10,10:20:30.02:298,30,0	1/1:14,0:14:31.65:301,32,0	1/1:8,0:7:18.05:199,18,0	1/1:31,0:30:63.63:699,64,0	1/1:10,0:10:15.02:154,15,0	1/1:19,0:19:47.22:476,47,0	1/1:16,0:16:20.97:200,21,0	1/1:9,0:8:16.40:176,16,0	1/1:3,0:3:9.03:104,9,0	1/1:5,0:5:7.38:72,7,0	1/1:5,0:5:9.50:105,9,0	1/1:11,0:10:21.61:191,22,0	1/1:23,0:22:28.51:261,29,0	1/1:14,0:14:35.38:325,35,0	1/1:20,0:20:36.03:388,36,0	1/1:17,0:17:18.01:176,18,0	1/1:10,0:10:9.02:99,9,0	1/1:4,0:4:3.01:34,3,0	1/1:8,0:8:2.92:17,3,0	1/1:7,0:7:11.97:107,12,0	1/1:17,0:17:18.01:183,18,0	1/1:25,0:25:42.50:430,42,0	1/1:16,0:16:20.55:198,21,0	1/1:15,0:14:9.89:122,10,0
chr10	90529432	.	A	AA	5390.90	PASS	AB=1.000;AC=52;AF=0.929;AN=56;BaseQRankSum=-1.694;DP=432;FS=12.503;HRun=5;HaplotypeScore=58.5696;InbreedingCoeff=0.4215;MQ=63.24;MQ0=13;MQRankSum=0.244;QD=13.25;ReadPosRankSum=-0.830;VQSLOD=2.4554;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:34.41:0,34,315	1/1:4,0:3:8.99:75,9,0	0/1:35,0:11:3.51:4,0,73	0/1:32,0:9:4.13:14,0,4	1/1:20,0:19:30.02:298,30,0	1/1:14,0:14:31.65:301,32,0	1/1:9,0:8:18.05:199,18,0	1/1:32,0:31:63.63:699,64,0	1/1:10,0:10:15.02:154,15,0	1/1:18,0:18:47.22:476,47,0	1/1:16,0:16:20.97:200,21,0	1/1:9,0:8:16.40:176,16,0	1/1:3,0:3:9.03:104,9,0	1/1:5,0:5:7.38:72,7,0	1/1:6,0:6:9.50:105,9,0	1/1:11,0:10:21.61:191,22,0	1/1:25,0:24:28.51:261,29,0	1/1:13,0:13:32.48:308,32,0	1/1:20,0:20:36.03:388,36,0	1/1:19,0:19:18.01:176,18,0	1/1:11,0:11:9.02:99,9,0	1/1:4,0:4:3.01:34,3,0	1/1:8,0:8:2.92:17,3,0	1/1:7,0:7:11.97:107,12,0	1/1:18,0:18:18.01:183,18,0	1/1:27,0:27:42.50:430,42,0	1/1:9,6:16:20.55:198,21,0	1/1:15,0:14:9.89:122,10,0
chr10	90529548	.	GAA	G	9584.10	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.799;DP=432;FS=8.979;HRun=10;HaplotypeScore=109.3022;InbreedingCoeff=0.9341;MQ=76.81;MQ0=0;MQRankSum=-3.649;QD=24.77;ReadPosRankSum=3.357;VQSLOD=3.8562;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:21:56.61:0,57,773	1/1:0,4:4:11.99:120,12,0	0/0:12,0:13:30.61:0,31,378	0/0:11,0:11:9:0,9,116	1/1:5,13:18:33.07:368,33,0	1/1:0,14:14:39.10:435,39,0	1/1:2,13:15:33.07:368,33,0	1/1:3,18:21:42.11:574,42,0	1/1:0,7:7:15.04:166,15,0	1/1:3,16:19:48.12:534,48,0	1/1:2,21:23:54.12:601,54,0	1/1:3,12:15:30.07:333,30,0	1/1:4,13:17:27.06:301,27,0	1/1:4,11:15:30.07:333,30,0	1/1:2,19:21:45.12:498,45,0	1/1:3,24:27:63.17:702,63,0	1/1:3,27:31:57.08:694,57,0	1/1:3,9:12:21.05:234,21,0	1/1:1,8:9:24.06:268,24,0	1/1:0,13:13:30.06:334,30,0	1/1:0,10:10:18.04:201,18,0	1/1:1,7:8:21.06:234,21,0	1/1:4,9:13:24.06:265,24,0	1/1:2,17:19:45.11:502,45,0	1/1:1,7:8:9.02:100,9,0	1/1:3,20:23:60.13:652,60,0	1/1:2,11:13:33.08:365,33,0	1/1:0,12:12:36.10:401,36,0
chr10	90530036	.	AG	A	3752.89	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-0.334;DP=350;FS=6.973;HRun=2;HaplotypeScore=43.7990;InbreedingCoeff=0.6799;MQ=55.97;MQ0=21;MQRankSum=-0.943;QD=13.26;ReadPosRankSum=0.552;VQSLOD=2.1729;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:46.80:0,47,465	1/1:6,0:6:17.09:115,17,0	0/0:29,0:4:3.15:0,3,56	0/0:15,0:4:7.33:0,7,44	1/1:4,20:22:35.52:244,36,0	1/1:16,0:17:28.88:187,29,0	1/1:6,0:7:10.90:63,11,0	1/1:10,2:13:19.73:120,20,0	1/1:1,9:10:4.82:37,5,0	1/1:2,10:12:26.40:231,26,0	1/1:10,2:12:26.48:221,26,0	1/1:9,0:9:19.82:171,20,0	1/1:1,9:10:9.01:91,9,0	1/1:4,0:3:6.47:54,6,0	1/1:6,1:7:12.48:116,12,0	1/1:4,0:5:7.74:46,8,0	1/1:15,2:16:34.48:261,34,0	1/1:15,1:17:37.89:290,38,0	1/1:0,9:9:25.55:217,26,0	1/1:18,2:20:44.15:342,44,0	1/1:7,0:7:11.65:78,12,0	1/1:11,0:10:18.86:110,19,0	1/1:6,0:6:7.73:45,8,0	1/1:6,2:8:19:146,19,0	1/1:12,0:14:30.64:228,31,0	1/1:15,0:14:29.02:243,29,0	1/1:3,15:17:9.01:90,9,0	1/1:3,0:3:2.22:7,2,0
chr10	90530037	.	GGA	G	2331.12	PASS	AB=0.979;AC=28;AF=0.500;AN=56;BaseQRankSum=-3.927;DP=394;FS=41.551;HRun=0;HaplotypeScore=57.5151;InbreedingCoeff=-0.3830;MQ=55.70;MQ0=21;MQRankSum=1.765;QD=7.35;ReadPosRankSum=5.687;VQSLOD=1.3227;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:47.43:0,47,572	0/1:7,0:7:8.84:88,0,9	0/0:28,0:4:6.85:0,7,87	0/0:15,0:4:3.19:0,3,44	1/1:25,0:23:8.70:172,9,0	0/1:18,0:18:28.04:100,0,28	0/1:8,0:8:29.51:45,0,30	0/1:15,0:15:49.58:68,0,50	0/1:12,0:12:1.11:1,0,33	0/1:13,1:15:34.13:180,0,34	1/1:11,1:12:13.51:163,14,0	1/1:10,0:10:9.45:133,9,0	0/1:12,0:12:14.71:17,0,15	0/1:6,0:5:37.78:39,0,38	0/1:9,0:9:8.65:76,0,9	0/1:5,1:6:16.35:30,0,16	0/1:17,0:17:11.20:187,0,11	0/1:20,1:19:7.98:259,0,8	0/1:10,0:10:0.45:163,0,0	0/1:21,0:21:48.11:172,0,48	1/1:7,0:7:11.09:86,11,0	0/1:11,0:10:36.63:43,0,37	0/1:8,0:8:19.36:27,0,19	0/1:11,0:11:41.72:49,0,42	0/1:19,0:19:55.72:163,0,56	0/1:14,0:14:13.18:206,0,13	0/1:21,0:20:24.54:25,0,62	0/0:8,0:8:19.60:0,20,112
chr10	90530303	.	CAG	C	1778.37	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.979;DP=751;FS=0.577;HRun=0;HaplotypeScore=92.2789;InbreedingCoeff=0.9969;MQ=89.05;MQ0=0;MQRankSum=-3.875;QD=32.33;ReadPosRankSum=2.464;VQSLOD=5.9219;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,51:55:99:1873,129,0	0/0:9,0:9:27.09:0,27,505	0/0:32,0:32:96.23:0,96,1603	0/0:30,0:29:84.12:0,84,1405	0/0:23,0:23:66.23:0,66,1228	0/0:23,0:23:60.19:0,60,1075	0/0:25,0:25:72.23:0,72,1286	0/0:38,0:38:99:0,105,1840	0/0:33,0:33:96.29:0,96,1703	0/0:39,0:39:99:0,105,1957	0/0:19,0:19:54.12:0,54,940	0/0:33,0:33:99:0,99,1783	0/0:29,0:29:84.26:0,84,1504	0/0:23,0:23:66.23:0,66,1222	0/0:39,0:39:99:0,114,2103	0/0:31,0:31:90.31:0,90,1677	0/0:22,0:22:60.18:0,60,1066	0/0:28,0:28:75.19:0,75,1334	0/0:23,0:23:66.21:0,66,1175	0/0:28,0:28:81.25:0,81,1454	0/0:29,0:29:84.25:0,84,1482	0/0:19,0:19:54.17:0,54,978	0/0:16,0:16:39.13:0,39,730	0/0:22,0:22:60.17:0,60,1049	0/0:17,0:17:48.15:0,48,861	0/0:34,0:34:96.29:0,96,1762	0/0:24,0:24:66.17:0,66,1167	0/0:8,0:8:24.08:0,24,449
chr10	90533871	.	A	AAT	23407.50	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=6.583;DP=614;FS=1.672;HRun=0;HaplotypeScore=109.7837;InbreedingCoeff=0.9954;MQ=82.73;MQ0=0;MQRankSum=-7.072;QD=42.87;ReadPosRankSum=3.396;VQSLOD=6.6596;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.25:0,78,1074	1/1:0,9:9:18.06:322,18,0	0/0:26,0:26:69.20:0,69,929	0/0:13,0:13:33.09:0,33,433	1/1:3,24:28:57.20:1018,57,0	1/1:2,19:21:54.19:970,54,0	1/1:1,10:12:27.09:485,27,0	1/1:5,37:45:99:1895,123,0	1/1:1,19:20:51.17:909,51,0	1/1:1,30:32:93.23:1590,93,0	1/1:1,21:22:54.18:947,54,0	1/1:3,12:15:33.11:588,33,0	1/1:4,20:24:63.22:1128,63,0	1/1:0,23:23:57.20:1019,57,0	1/1:3,22:25:63.22:1127,63,0	1/1:5,17:24:54.19:961,54,0	1/1:2,12:14:33.11:593,33,0	1/1:4,19:23:60.21:1065,60,0	1/1:4,14:18:51.12:847,51,0	1/1:1,27:28:66.23:1188,66,0	1/1:2,10:13:30.10:536,30,0	1/1:0,16:17:39.13:673,39,0	1/1:1,21:22:54.18:953,54,0	1/1:1,12:13:30.10:539,30,0	1/1:2,19:23:54.19:971,54,0	1/1:3,28:31:84.23:1467,84,0	1/1:2,26:29:65.95:1185,66,0	1/1:3,12:15:24.08:432,24,0
chr10	90534639	.	A	AAT	3469.42	PASS	AC=44;AF=0.880;AN=50;BaseQRankSum=-1.083;DP=358;FS=5.179;HRun=0;HaplotypeScore=63.9962;InbreedingCoeff=0.5677;MQ=90.64;MQ0=3;MQRankSum=-4.914;QD=13.34;ReadPosRankSum=1.730;VQSLOD=2.8265;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:0.72:0,1,15	1/1:5,0:5:11.98:124,12,0	0/0:23,0:19:32.06:0,32,256	0/0:43,0:31:18.72:0,19,279	1/1:12,0:9:23.78:196,24,0	1/1:15,0:13:8.98:73,9,0	1/1:15,0:15:12.90:95,13,0	1/1:23,0:23:62.74:561,63,0	1/1:10,0:10:12.47:114,12,0	1/1:13,0:13:27.22:223,27,0	1/1:11,0:7:15.01:187,15,0	1/1:1,13:13:3.01:37,3,0	1/1:12,0:12:17.91:167,18,0	1/1:8,0:8:3:25,3,0	1/1:9,0:9:3:25,3,0	1/1:10,0:10:17.99:177,18,0	1/1:12,0:12:17.75:120,18,0	1/1:1,0:1:2.99:24,3,0	1/1:15,0:15:34.33:292,34,0	1/1:0,9:9:3.01:54,3,0	./.	./.	1/1:9,0:7:14.87:129,15,0	./.	1/1:1,11:12:3.01:53,3,0	1/1:17,0:16:41.68:340,42,0	1/1:17,0:17:38.48:331,38,0	1/1:11,0:7:14.97:121,15,0
chr10	90534640	.	A	ATATCTC	4259.66	PASS	AB=1.000;AC=46;AF=0.920;AN=50;BaseQRankSum=-1.066;DP=360;FS=8.305;HRun=0;HaplotypeScore=79.6032;InbreedingCoeff=0.2178;MQ=89.01;MQ0=3;MQRankSum=-5.466;QD=13.52;ReadPosRankSum=0.800;VQSLOD=2.5497;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:12.97:64,0,13	1/1:5,0:5:11.98:149,12,0	0/0:23,0:19:35.76:0,36,331	0/1:42,0:30:18.95:19,0,268	1/1:11,0:8:23.78:196,24,0	1/1:15,0:13:8.98:73,9,0	1/1:15,0:15:14.96:189,15,0	1/1:24,0:22:64.65:701,65,0	1/1:10,0:10:12.47:115,12,0	1/1:1,13:13:27.64:273,28,0	1/1:10,0:6:15.01:187,15,0	1/1:13,0:12:3.01:84,3,0	1/1:11,0:11:17.91:192,18,0	1/1:7,0:7:3:25,3,0	1/1:9,0:9:3:25,3,0	1/1:10,0:10:17.99:203,18,0	1/1:12,0:12:17.75:120,18,0	1/1:1,0:1:2.99:24,3,0	1/1:22,0:20:53.52:566,54,0	1/1:8,0:8:3.01:75,3,0	./.	./.	1/1:8,0:6:12:114,12,0	./.	1/1:13,0:13:3.01:73,3,0	1/1:17,0:16:41.68:340,42,0	1/1:16,0:16:38.48:331,38,0	1/1:11,0:7:14.97:121,15,0
chr10	90535127	.	C	CA	1045.03	PASS	AB=0.968;AC=48;AF=0.857;AN=56;BaseQRankSum=2.952;DP=436;FS=0.858;HRun=13;HaplotypeScore=103.4328;InbreedingCoeff=0.2949;MQ=74.27;MQ0=20;MQRankSum=-4.285;QD=2.79;ReadPosRankSum=-1.193;VQSLOD=0.4456;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,4:16:24.71:25,0,129	1/1:4,0:4:7.08:37,7,0	0/0:61,0:30:35.82:0,36,210	0/1:36,0:14:18.50:21,0,18	1/1:16,0:16:24.30:117,24,0	1/1:14,0:11:5.72:29,6,0	1/1:11,0:11:2.92:18,3,0	1/1:26,0:18:15.80:88,16,0	1/1:10,0:7:2.88:16,3,0	1/1:26,0:24:21.95:116,22,0	1/1:9,0:9:12.84:65,13,0	1/1:10,0:8:1.25:3,1,0	1/1:12,0:10:0.03:0,0,0	0/1:11,0:9:2.37:33,0,2	1/1:20,0:14:6.27:35,6,0	0/1:6,0:3:0:0,0,0	1/1:10,0:6:0.89:2,1,0	1/1:7,0:7:5.82:34,6,0	1/1:11,0:10:6.67:42,7,0	1/1:14,0:13:16.63:74,17,0	0/1:3,0:3:0:0,0,0	1/1:8,0:8:6.60:31,7,0	1/1:15,0:14:12.76:66,13,0	0/1:3,0:3:0:0,0,0	1/1:11,0:11:13.59:64,14,0	1/1:37,0:30:27.52:128,28,0	1/1:17,0:13:9.14:52,9,0	1/1:11,0:11:11.98:68,12,0
chr10	90535409	.	G	GA	519.59	PASS	AC=32;AF=0.842;AN=38;BaseQRankSum=1.055;DP=120;FS=15.914;HRun=0;HaplotypeScore=24.9313;InbreedingCoeff=0.4012;MQ=97.83;MQ0=7;MQRankSum=0.213;QD=13.67;ReadPosRankSum=-6.010;VQSLOD=0.9330;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.30:0,90,1254	./.	0/0:18,0:13:39.12:0,39,524	0/0:21,0:15:42.14:0,42,574	./.	1/1:0,2:2:3.01:33,3,0	./.	1/1:3,0:2:3:25,3,0	./.	./.	1/1:3,0:3:9:83,9,0	1/1:2,0:2:6:52,6,0	1/1:2,0:2:6:67,6,0	1/1:1,1:1:3:27,3,0	./.	1/1:0,2:2:3.01:32,3,0	1/1:4,0:4:2.99:23,3,0	./.	1/1:1,0:1:3:28,3,0	1/1:0,3:3:3.01:32,3,0	1/1:0,3:3:3:29,3,0	1/1:0,2:2:3:26,3,0	1/1:3,0:3:3.01:35,3,0	1/1:3,0:3:6:66,6,0	1/1:1,0:1:2.97:20,3,0	1/1:2,0:2:6.01:65,6,0	./.	./.
chr10	90538629	.	GAT	G	14050.24	PASS	AB=0.708;AC=25;AF=0.446;AN=56;BaseQRankSum=-7.260;DP=988;FS=10.487;HRun=0;HaplotypeScore=220.4741;InbreedingCoeff=-0.8065;MQ=66.24;MQ0=0;MQRankSum=-11.993;QD=15.47;ReadPosRankSum=3.977;VQSLOD=3.6204;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,2152	0/1:11,6:17:99:240,0,617	0/0:24,0:24:72.09:0,72,1218	0/0:19,0:19:47.15:0,47,792	0/1:25,19:44:99:731,0,1176	0/1:24,18:42:99:665,0,1213	0/1:30,12:42:99:324,0,1634	0/1:35,16:50:99:564,0,1745	0/1:33,19:52:99:723,0,1825	0/1:26,24:50:99:950,0,1401	0/1:18,10:28:99:356,0,1002	0/1:17,25:42:99:1093,0,847	0/1:20,21:41:99:852,0,1058	0/1:23,18:40:99:622,0,1118	0/1:20,19:39:99:807,0,1087	0/1:30,18:48:99:650,0,1475	0/1:16,12:28:99:362,0,887	0/1:13,8:21:99:189,0,694	0/1:20,13:33:99:439,0,1062	0/1:24,16:40:99:613,0,1303	0/1:12,11:23:99:283,0,661	0/1:18,16:33:99:542,0,925	0/1:8,16:24:99:705,0,375	0/1:16,10:26:99:136,0,565	0/1:22,15:37:99:622,0,1130	0/1:32,13:45:99:499,0,1735	0/1:26,23:49:99:970,0,1367	0/1:8,3:11:99:113,0,453
chr10	90538773	.	TC	T	11084.29	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=7.906;DP=696;FS=10.322;HRun=3;HaplotypeScore=220.5375;InbreedingCoeff=0.9969;MQ=60.27;MQ0=0;MQRankSum=-3.131;QD=17.00;ReadPosRankSum=4.596;VQSLOD=3.1368;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:75.94:607,76,0	1/1:9,0:9:24.37:170,24,0	0/0:18,0:18:21.46:0,21,159	0/0:26,0:26:61.71:0,62,291	1/1:24,0:24:58.91:461,59,0	1/1:17,0:17:35.49:184,35,0	1/1:26,0:26:44.24:350,44,0	1/1:32,0:32:76.86:403,77,0	1/1:22,0:22:55.93:335,56,0	1/1:39,0:39:64.51:689,65,0	1/1:17,0:17:35.28:276,35,0	1/1:19,0:19:43.43:248,43,0	1/1:24,0:24:56.51:349,57,0	1/1:34,0:33:80.99:574,81,0	1/1:35,0:35:76.95:498,77,0	1/1:27,0:27:64.40:466,64,0	1/1:28,0:28:71.69:582,72,0	1/1:16,0:16:45.79:329,46,0	1/1:19,2:21:41.29:336,41,0	1/1:38,0:38:91.12:721,91,0	1/1:34,0:34:70.79:529,71,0	1/1:20,1:21:51.04:421,51,0	1/1:20,0:20:42.61:300,43,0	1/1:27,0:27:60.72:488,61,0	1/1:16,0:16:41.17:329,41,0	1/1:20,0:20:55.69:472,56,0	1/1:35,0:34:78.06:467,78,0	1/1:19,2:21:58.81:502,59,0
chr10	90538775	.	C	CT	14612.58	PASS	AB=0.944;AC=53;AF=0.946;AN=56;BaseQRankSum=5.935;DP=670;FS=5.378;HRun=0;HaplotypeScore=209.9859;InbreedingCoeff=0.6581;MQ=60.51;MQ0=0;MQRankSum=-3.050;QD=22.66;ReadPosRankSum=3.905;VQSLOD=4.6844;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,7:31:81.99:763,82,0	1/1:6,3:9:26.36:238,26,0	0/1:15,0:17:16.15:16,0,108	0/0:25,0:25:54.99:0,55,234	1/1:19,4:23:64.23:587,64,0	1/1:12,3:15:42.53:303,43,0	1/1:18,4:22:51.11:451,51,0	1/1:2,25:27:80.15:563,80,0	1/1:22,3:25:65.54:484,66,0	1/1:22,15:37:80.08:896,80,0	1/1:10,5:15:40.16:360,40,0	1/1:17,4:21:55.34:361,55,0	1/1:20,3:23:65.57:479,66,0	1/1:27,7:33:89.89:756,90,0	1/1:27,7:34:92.68:688,93,0	1/1:24,2:26:72.35:623,72,0	1/1:25,2:27:74.23:714,74,0	1/1:12,4:16:47.55:424,48,0	1/1:13,6:19:46.34:415,46,0	1/1:29,9:38:99:934,103,0	1/1:27,8:35:84.62:700,85,0	1/1:16,4:20:55.57:544,56,0	1/1:12,6:18:48.73:401,49,0	1/1:19,7:26:64.50:618,65,0	1/1:11,4:15:44.07:432,44,0	1/1:15,5:20:59.03:595,59,0	1/1:24,8:31:84.84:657,85,0	1/1:18,2:20:59.84:609,60,0
chr10	90538778	.	AT	A	12909.56	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=7.327;DP=682;FS=21.456;HRun=1;HaplotypeScore=212.3818;InbreedingCoeff=0.9980;MQ=58.73;MQ0=0;MQRankSum=-2.734;QD=20.33;ReadPosRankSum=5.477;VQSLOD=2.4897;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,7:29:75.52:644,76,0	1/1:6,3:9:25.63:190,26,0	0/0:21,0:20:24.19:0,24,294	0/0:26,0:26:63.37:0,63,418	1/1:18,5:23:63.91:553,64,0	1/1:12,3:15:37.01:196,37,0	1/1:19,4:23:53.26:462,53,0	1/1:4,25:29:84.77:550,85,0	1/1:24,3:27:68.92:461,69,0	1/1:23,15:38:75.99:838,76,0	1/1:10,5:15:39.44:323,39,0	1/1:19,4:23:54.25:313,54,0	1/1:20,3:23:61.13:397,61,0	1/1:27,7:33:86.86:659,87,0	1/1:26,7:33:87.55:579,88,0	1/1:23,3:26:68.22:522,68,0	1/1:22,2:24:65.06:581,65,0	1/1:12,4:16:46.78:374,47,0	1/1:11,6:17:32.75:324,33,0	1/1:31,10:41:99:932,106,0	1/1:27,9:36:85.30:663,85,0	1/1:15,5:20:46.95:440,47,0	1/1:12,6:18:46.59:342,47,0	1/1:21,7:28:69.46:628,69,0	1/1:11,4:15:43.24:370,43,0	1/1:15,5:20:59.29:537,59,0	1/1:25,8:33:82.25:566,82,0	1/1:18,2:20:44.65:464,45,0
chr10	90538779	.	T	TA	18963.13	PASS	AB=0.913;AC=53;AF=0.946;AN=56;BaseQRankSum=5.420;DP=730;FS=15.757;HRun=1;HaplotypeScore=223.9322;InbreedingCoeff=0.6792;MQ=57.18;MQ0=0;MQRankSum=-3.028;QD=26.94;ReadPosRankSum=4.089;VQSLOD=2.0185;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:77.81:866,78,0	1/1:12,0:12:29.86:296,30,0	0/1:19,2:19:11.23:11,0,131	0/0:26,0:26:60.91:0,61,295	1/1:24,1:25:65.84:755,66,0	1/1:17,0:17:44.47:392,44,0	1/1:26,0:26:62.34:675,62,0	1/1:30,6:36:99:999,108,0	1/1:30,0:30:80.21:725,80,0	1/1:35,2:38:84.12:1173,84,0	1/1:16,0:16:41.69:446,42,0	1/1:21,2:23:59.25:515,59,0	1/1:25,0:25:73.98:667,74,0	1/1:35,0:34:92.24:907,92,0	1/1:35,0:35:97.96:924,98,0	1/1:27,0:27:71.61:736,72,0	1/1:26,0:26:69.02:786,69,0	1/1:16,0:16:47.98:535,48,0	1/1:17,1:17:42.06:490,42,0	1/1:44,1:45:99:1346,125,0	1/1:36,2:38:89.61:986,90,0	1/1:20,0:20:53.91:612,54,0	1/1:18,0:18:50.41:503,50,0	1/1:34,0:34:86.15:880,86,0	1/1:17,0:17:47.88:525,48,0	1/1:23,0:23:66.05:765,66,0	1/1:33,0:32:89.52:825,90,0	1/1:18,0:18:54.07:624,54,0
chr10	90539205	.	C	CAAA	10601.70	PASS	AB=0.550;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.866;DP=625;FS=1.001;HRun=11;HaplotypeScore=105.3915;InbreedingCoeff=0.7134;MQ=67.67;MQ0=5;MQRankSum=-5.060;QD=17.70;ReadPosRankSum=2.235;VQSLOD=3.3585;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,1:36:67.02:540,67,0	1/1:4,2:11:14.79:222,15,0	0/0:13,0:14:12.71:0,13,274	0/0:10,0:8:4.77:0,5,122	1/1:3,0:29:77.69:631,78,0	1/1:1,2:18:28.19:276,28,0	0/1:2,1:11:7.73:112,0,8	1/1:3,0:30:84.99:689,85,0	1/1:5,0:17:23.91:183,24,0	1/1:6,0:28:67.02:530,67,0	1/1:4,0:21:46.09:374,46,0	1/1:4,0:15:23.17:155,23,0	1/1:5,0:19:35.65:283,36,0	1/1:3,0:16:23.84:177,24,0	1/1:8,21:30:52.71:929,53,0	1/1:3,1:21:38.28:325,38,0	1/1:6,17:28:52.40:892,52,0	1/1:0,2:15:34.17:323,34,0	1/1:6,1:13:20.95:196,21,0	1/1:4,0:36:88.02:709,88,0	1/1:3,0:20:35.37:257,35,0	1/1:7,0:25:43.90:343,44,0	1/1:5,0:25:50.82:402,51,0	1/1:1,0:20:41.82:318,42,0	1/1:4,1:30:47.82:378,48,0	1/1:1,1:24:65.33:564,65,0	1/1:5,0:36:58.02:450,58,0	1/1:0,2:20:35.91:343,36,0
chr10	90540443	.	G	GA	13929.04	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.585;DP=616;FS=6.866;HRun=9;HaplotypeScore=91.6824;InbreedingCoeff=0.8777;MQ=68.03;MQ0=3;MQRankSum=-2.350;QD=25.23;ReadPosRankSum=5.242;VQSLOD=4.8022;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,35:37:90.08:977,90,0	1/1:1,6:8:17.88:175,18,0	0/0:34,0:17:16.77:0,17,220	0/0:30,0:19:10.60:0,11,206	1/1:4,24:28:66.14:714,66,0	1/1:1,15:16:42.11:465,42,0	1/1:2,21:24:60:645,60,0	1/1:21,21:43:38.23:849,38,0	1/1:1,9:10:30.08:331,30,0	1/1:7,18:25:65.66:702,66,0	1/1:1,16:17:42.54:427,43,0	1/1:6,13:19:39.10:429,39,0	1/1:3,16:19:25.62:506,26,0	1/1:1,18:19:45.12:498,45,0	1/1:5,23:28:63.17:697,63,0	1/1:4,16:21:41.95:446,42,0	1/1:6,24:30:63.17:697,63,0	1/1:2,18:20:48.13:531,48,0	1/1:3,13:15:15.30:373,15,0	1/1:4,21:25:60.09:636,60,0	1/1:1,12:13:36.10:398,36,0	1/1:3,23:26:66.18:726,66,0	1/1:6,18:24:54.15:596,54,0	1/1:3,15:18:42.11:465,42,0	1/1:0,19:19:51.14:564,51,0	1/1:3,22:27:48.70:688,49,0	1/1:2,16:18:32.83:365,33,0	1/1:1,1:2:3.01:33,3,0
chr10	90540655	.	T	TG	29681.51	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=5.123;DP=748;FS=3.322;HRun=2;HaplotypeScore=129.3980;InbreedingCoeff=0.9982;MQ=77.10;MQ0=0;MQRankSum=-4.756;QD=44.37;ReadPosRankSum=5.474;VQSLOD=3.7825;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,1979	1/1:0,11:11:33.11:527,33,0	0/0:15,0:15:33.10:0,33,444	0/0:16,0:16:47.98:0,48,620	1/1:0,31:31:78.26:1235,78,0	1/1:0,19:19:48.16:767,48,0	1/1:0,20:20:54.18:863,54,0	1/1:1,32:33:96.30:1489,96,0	1/1:1,28:29:75.25:1187,75,0	1/1:0,37:37:99:1775,111,0	1/1:0,28:28:78.27:1247,78,0	1/1:0,16:16:45.15:719,45,0	1/1:1,35:36:96.33:1534,96,0	1/1:0,33:33:96.33:1535,96,0	1/1:0,32:32:84.29:1342,84,0	1/1:0,29:29:84.29:1343,84,0	1/1:0,28:28:75.26:1199,75,0	1/1:0,8:8:21.07:335,21,0	1/1:0,23:23:69.24:1104,69,0	1/1:0,29:29:78.27:1247,78,0	1/1:0,60:60:99:2830,178,0	1/1:0,18:18:51.17:814,51,0	1/1:0,18:18:54.18:863,54,0	1/1:1,30:31:84.29:1343,84,0	1/1:1,22:23:63.21:1007,63,0	1/1:0,37:37:99:1652,105,0	1/1:1,29:30:78.27:1244,78,0	1/1:0,10:10:30.10:479,30,0
chr10	90540811	.	AT	A	617.54	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.562;DP=633;FS=10.243;HRun=4;HaplotypeScore=56.6959;InbreedingCoeff=0.9867;MQ=69.10;MQ0=0;MQRankSum=-0.697;QD=28.07;ReadPosRankSum=-0.571;VQSLOD=2.1151;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:51.17:712,51,0	0/0:14,0:14:42.10:0,42,595	0/0:11,0:11:20.25:0,20,362	0/0:15,0:15:42.12:0,42,594	0/0:30,0:30:90.25:0,90,1347	0/0:18,0:18:54.17:0,54,802	0/0:10,0:10:30.07:0,30,412	0/0:36,0:36:99:0,108,1538	0/0:19,0:19:57.16:0,57,829	0/0:34,0:33:99:0,99,1496	0/0:31,0:31:93.23:0,93,1368	0/0:17,0:17:48.16:0,48,734	0/0:26,0:26:78.13:0,78,1096	0/0:29,0:29:87.28:0,87,1307	0/0:28,0:28:84.21:0,84,1179	0/0:20,0:20:60.20:0,60,917	0/0:27,0:27:81.24:0,81,1185	0/0:19,0:19:54.16:0,54,790	0/0:20,0:20:51.15:0,51,740	0/0:25,0:25:75.24:0,75,1122	0/0:21,0:21:60.16:0,60,872	0/0:24,0:24:72.23:0,72,1076	0/0:21,0:21:60.19:0,60,897	0/0:6,0:6:18.04:0,18,252	0/0:28,0:28:81.26:0,81,1214	0/0:32,0:32:96.31:0,96,1432	0/0:35,0:35:99:0,105,1464	0/0:15,0:15:45.15:0,45,688
chr10	90541728	.	C	CTTT	9936.99	PASS	AB=0.647;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.887;DP=581;FS=13.798;HRun=13;HaplotypeScore=125.1697;InbreedingCoeff=0.7034;MQ=67.57;MQ0=9;MQRankSum=-2.502;QD=18.54;ReadPosRankSum=0.596;VQSLOD=2.0266;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:43:66.05:642,66,0	1/1:4,3:13:27.06:357,27,0	0/0:27,0:15:15.91:0,16,136	0/0:18,0:11:11.58:0,12,98	1/1:8,5:13:18.01:253,18,0	1/1:11,8:22:36.59:558,37,0	1/1:4,0:11:26.39:247,26,0	1/1:20,5:29:37.47:521,37,0	1/1:7,8:15:19.61:297,20,0	1/1:7,0:16:21.05:247,21,0	1/1:6,3:21:42.04:438,42,0	1/1:14,9:25:33.06:504,33,0	1/1:13,7:23:30.97:461,31,0	1/1:5,8:14:18.06:278,18,0	1/1:6,2:23:38.89:431,39,0	1/1:8,2:24:20.58:455,21,0	1/1:6,1:32:48.11:554,48,0	0/1:5,0:10:7.64:36,0,8	1/1:24,4:28:26.97:351,27,0	1/1:10,9:23:39.57:604,40,0	1/1:3,3:6:7.52:57,8,0	1/1:3,2:5:6.02:90,6,0	1/1:6,7:16:13.81:212,14,0	1/1:8,8:18:24.06:356,24,0	1/1:11,0:31:44.47:427,44,0	1/1:14,8:25:45.74:670,46,0	1/1:17,10:30:31.11:409,31,0	1/1:7,7:15:30.06:481,30,0
chr10	90542677	.	AAAAC	A	12820.31	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=6.117;DP=480;FS=2.323;HRun=0;HaplotypeScore=86.0349;InbreedingCoeff=0.9517;MQ=64.66;MQ0=4;MQRankSum=-1.813;QD=31.19;ReadPosRankSum=2.184;VQSLOD=4.9277;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:69.23:0,69,1617	1/1:0,5:5:15.05:248,15,0	0/0:23,0:19:24.08:0,24,485	0/0:15,0:14:9:0,9,304	1/1:6,21:27:66.14:1016,66,0	1/1:5,11:16:33.11:545,33,0	1/1:10,7:17:15.05:248,15,0	1/1:15,21:36:63.12:911,63,0	1/1:4,12:16:30.10:496,30,0	1/1:9,8:16:21.07:347,21,0	1/1:2,9:11:30.06:463,30,0	1/1:5,8:13:21.07:347,21,0	1/1:5,11:16:24.08:396,24,0	1/1:1,13:14:36.12:594,36,0	1/1:4,17:21:42.14:694,42,0	1/1:4,14:18:29.94:496,30,0	1/1:4,21:25:45.15:742,45,0	1/1:7,9:16:27.04:415,27,0	1/1:8,11:18:35.96:571,36,0	1/1:5,18:22:53.98:745,54,0	1/1:0,6:6:15.05:248,15,0	1/1:1,7:8:18.02:268,18,0	1/1:2,14:16:33.11:545,33,0	1/1:0,14:14:30.10:495,30,0	1/1:1,10:11:27.09:446,27,0	1/1:6,10:15:29.99:411,30,0	1/1:4,17:21:47.44:787,47,0	1/1:1,8:9:21.07:347,21,0
chr10	90543287	.	TTCC	T	3501.63	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.353;DP=780;FS=0.962;HRun=0;HaplotypeScore=127.8417;InbreedingCoeff=0.9996;MQ=87.38;MQ0=0;MQRankSum=-2.847;QD=46.69;ReadPosRankSum=3.952;VQSLOD=5.7992;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,147,3298	1/1:0,10:10:30.10:511,30,0	0/0:25,0:25:63.22:0,63,1374	0/0:31,0:31:84.28:0,84,1793	0/0:17,0:17:48.16:0,48,1075	0/0:15,0:15:45.15:0,45,1036	0/0:24,0:24:69.24:0,69,1589	0/0:33,0:33:93.30:0,93,2047	0/0:26,0:26:75.25:0,75,1672	0/0:31,0:31:90.29:0,90,1926	0/0:11,0:11:33.10:0,33,717	0/0:30,0:30:90.31:0,90,2055	0/0:29,0:29:84.29:0,84,1923	0/0:34,0:34:99:0,102,2289	1/1:1,30:31:87.30:1471,87,0	0/0:31,0:31:90.29:0,90,2010	1/1:0,34:34:90.31:1520,90,0	0/0:28,0:28:84.27:0,84,1840	0/0:20,0:20:57.16:0,57,1131	0/0:33,0:33:93.31:0,93,2079	0/0:32,0:32:96.33:0,96,2182	0/0:32,0:32:90.31:0,90,2033	0/0:22,0:22:63.22:0,63,1453	0/0:32,0:32:93.31:0,93,2067	0/0:39,0:39:99:0,114,2510	0/0:30,0:30:90.31:0,90,2061	0/0:37,0:37:99:0,105,2378	0/0:11,0:11:30.97:0,31,648
chr10	90547440	.	AGTACC	A	261.51	PASS	AB=0.818;AC=19;AF=0.633;AN=30;BaseQRankSum=-1.204;DP=160;FS=4.077;HRun=0;HaplotypeScore=38.6154;InbreedingCoeff=0.3802;MQ=71.66;MQ0=20;MQRankSum=-0.934;QD=10.90;ReadPosRankSum=0.420;VQSLOD=1.4483;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:9:8.80:9,0,99	./.	0/0:56,0:8:16.53:0,17,162	0/0:63,0:19:19.69:0,20,252	./.	./.	1/1:2,0:1:0.89:2,1,0	./.	1/1:1,0:1:0.89:2,1,0	./.	./.	./.	1/1:1,1:2:6.02:115,6,0	./.	./.	1/1:0,1:1:3.01:59,3,0	1/1:0,1:1:3.01:59,3,0	1/1:2,0:1:0.47:1,0,0	0/0:2,0:1:2.88:0,3,15	./.	./.	1/1:2,0:2:3.01:58,3,0	1/1:2,0:1:0.89:2,1,0	./.	./.	0/0:3,0:2:5.75:0,6,30	0/0:2,0:2:2.04:0,2,6	1/1:1,1:1:3.01:59,3,0
chr10	90547481	.	G	GGTA	829.52	PASS	AB=0.905;AC=37;AF=0.804;AN=46;BaseQRankSum=0.989;DP=80;FS=4.041;HRun=0;HaplotypeScore=30.1501;InbreedingCoeff=0.1018;MQ=83.21;MQ0=5;MQRankSum=0.593;QD=11.36;ReadPosRankSum=1.141;VQSLOD=2.4408;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:2.96:0,3,19	1/1:0,2:2:6:66,6,0	0/1:17,0:5:20.30:43,0,20	0/1:19,0:8:4.35:4,0,13	1/1:2,1:3:8.36:80,8,0	1/1:1,0:1:3.01:33,3,0	1/1:1,0:1:2.99:23,3,0	./.	1/1:1,0:1:2.88:15,3,0	1/1:1,1:2:5.51:51,6,0	1/1:1,0:1:3.01:34,3,0	1/1:1,0:1:3:27,3,0	1/1:1,0:2:5.85:42,6,0	1/1:0,1:1:3.01:36,3,0	1/1:1,0:1:3.01:31,3,0	1/1:1,0:1:2.97:20,3,0	1/1:2,1:3:5.79:38,6,0	./.	1/1:2,0:2:6.01:61,6,0	0/1:3,1:5:16.40:135,0,16	./.	1/1:1,0:2:3.01:57,3,0	1/1:0,1:2:6.02:82,6,0	1/1:2,1:4:7.81:71,8,0	0/0:1,0:1:2.50:0,2,9	./.	0/0:1,0:1:2.68:0,3,11	./.
chr10	90547484	.	A	ATCTG	909.86	PASS	AB=0.835;AC=34;AF=0.773;AN=44;BaseQRankSum=0.997;DP=79;FS=5.930;HRun=0;HaplotypeScore=26.0587;InbreedingCoeff=0.1885;MQ=78.52;MQ0=4;MQRankSum=1.495;QD=16.85;ReadPosRankSum=1.922;VQSLOD=2.1715;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:2.92:0,3,17	1/1:0,1:2:6.01:80,6,0	0/1:21,0:5:1.18:31,0,1	0/0:17,0:7:1.12:0,1,24	1/1:1,0:3:9.01:90,9,0	1/1:0,0:1:3.01:32,3,0	1/1:0,0:1:3:26,3,0	./.	1/1:1,0:1:2.96:19,3,0	1/1:1,1:2:5.99:64,6,0	1/1:1,0:1:3.01:31,3,0	1/1:1,0:1:3.01:31,3,0	1/1:0,0:1:3.01:35,3,0	1/1:1,0:1:2.84:14,3,0	1/1:0,0:1:3.01:46,3,0	./.	1/1:1,0:3:6:71,6,0	./.	1/1:1,0:2:6.02:95,6,0	0/1:3,1:5:31.68:129,0,32	./.	1/1:1,0:1:3.01:64,3,0	1/1:0,2:2:6.02:86,6,0	1/1:2,1:4:8.90:84,9,0	0/0:1,0:1:3.01:0,3,49	./.	0/0:1,0:1:3.01:0,3,53	./.
chr10	90547505	.	C	CT	97.88	PASS	AB=0.667;AC=13;AF=0.813;AN=16;DP=37;FS=0.000;HRun=0;HaplotypeScore=23.5587;MQ=63.05;MQ0=2;QD=5.15;VQSLOD=2.6300;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,2:2:2.94:18,3,0	1/1:9,0:2:2.90:16,3,0	./.	0/1:1,1:2:0:0,0,0	./.	./.	./.	./.	1/1:0,1:1:3.01:48,3,0	1/1:0,1:1:2.94:18,3,0	./.	./.	./.	1/1:0,1:1:2.94:18,3,0	./.	./.	./.	1/1:0,1:1:3.01:48,3,0	./.	./.	0/0:0,1:1:0:0,0,0	./.	./.	./.	./.	./.	./.
chr10	90549126	.	ATG	A	2164.90	PASS	AC=46;AF=0.885;AN=52;BaseQRankSum=0.198;DP=231;FS=18.318;HRun=0;HaplotypeScore=66.5218;InbreedingCoeff=0.4875;MQ=70.48;MQ0=6;MQRankSum=-3.141;QD=15.57;ReadPosRankSum=2.435;VQSLOD=2.0101;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:11:11.96:0,12,93	1/1:4,0:4:8.52:74,9,0	0/0:26,0:10:5.47:0,5,62	0/0:52,1:18:5.01:0,5,65	1/1:4,4:8:9.46:78,9,0	1/1:2,4:6:15:133,15,0	1/1:1,0:1:2.99:23,3,0	1/1:26,0:26:63.22:560,63,0	1/1:3,0:3:2.94:18,3,0	1/1:4,0:4:8.96:75,9,0	1/1:1,1:2:2.96:19,3,0	1/1:0,2:2:6.01:56,6,0	1/1:1,2:3:6:52,6,0	1/1:5,2:7:14.99:127,15,0	1/1:0,5:5:6.01:57,6,0	./.	1/1:9,4:13:11.93:93,12,0	1/1:7,2:9:17.93:144,18,0	1/1:3,3:6:17.98:162,18,0	1/1:4,0:4:8.99:75,9,0	./.	1/1:2,0:2:5.99:50,6,0	1/1:2,1:3:3:25,3,0	1/1:2,1:3:5.96:44,6,0	1/1:4,5:9:9.01:93,9,0	1/1:4,3:7:14.97:129,15,0	1/1:3,2:5:12:105,12,0	1/1:6,1:6:11.98:100,12,0
chr10	90549144	.	ATATATATATATATG	A	2411.15	PASS	AB=1.000;AC=29;AF=0.690;AN=42;BaseQRankSum=0.838;DP=233;FS=0.000;HRun=0;HaplotypeScore=93.8097;InbreedingCoeff=0.1109;MQ=67.31;MQ0=10;MQRankSum=0.547;QD=16.29;ReadPosRankSum=0.497;VQSLOD=1.8536;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:9:27.73:38,0,28	0/0:3,0:3:3.01:0,3,43	1/1:33,0:8:2.91:21,3,0	0/0:70,0:21:6.72:0,7,150	1/1:1,4:5:3.01:109,3,0	1/1:2,3:5:12.04:383,12,0	1/1:2,0:2:5.23:47,5,0	0/1:31,0:30:54.64:277,0,55	1/1:2,0:2:0.89:2,1,0	./.	0/0:2,0:2:3.01:0,3,45	1/1:1,2:3:6.02:218,6,0	1/1:1,2:3:2.47:108,2,0	1/1:1,2:3:3.01:108,3,0	0/0:5,0:5:4.83:0,5,19	./.	0/1:10,0:10:11.23:11,0,41	0/1:8,0:8:10.10:10,0,140	1/1:4,3:7:6.27:385,6,0	./.	./.	./.	./.	./.	0/1:9,0:9:99:113,0,102	1/1:4,3:7:14.52:361,15,0	1/1:1,2:3:6.02:218,6,0	1/1:5,1:5:9.44:133,9,0
chr10	90549146	.	ATATATATATATG	A	2806.03	PASS	AB=0.980;AC=31;AF=0.738;AN=42;BaseQRankSum=-1.222;DP=221;FS=0.000;HRun=0;HaplotypeScore=81.5900;InbreedingCoeff=0.1638;MQ=66.55;MQ0=10;MQRankSum=-1.944;QD=16.41;ReadPosRankSum=1.498;VQSLOD=1.7303;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:9:5.50:0,6,38	0/0:2,0:2:3.01:0,3,33	0/0:33,0:6:0:0,0,0	0/1:70,0:21:4.49:4,0,96	1/1:4,0:4:3.48:101,3,0	1/1:5,0:5:12.04:342,12,0	1/1:2,0:2:6:74,6,0	1/1:27,0:26:22.53:585,23,0	1/1:1,0:2:2.99:23,3,0	./.	0/1:2,0:2:0:0,0,0	1/1:3,0:3:6.02:201,6,0	1/1:3,0:3:5.95:119,6,0	1/1:2,0:2:3.01:100,3,0	1/1:5,0:5:5.69:30,6,0	./.	0/1:10,0:10:14.03:49,0,14	0/1:8,0:8:36.39:36,0,64	1/1:7,0:7:20.91:424,21,0	./.	./.	./.	./.	./.	0/1:8,1:9:85.52:86,0,86	1/1:3,3:6:15.03:379,15,0	1/1:2,0:2:6.02:201,6,0	1/1:4,0:3:9.02:174,9,0
chr10	90549152	.	ATATATG	A	2212.50	PASS	AB=1.000;AC=37;AF=0.881;AN=42;BaseQRankSum=-2.190;DP=211;FS=5.233;HRun=0;HaplotypeScore=74.0149;InbreedingCoeff=0.3719;MQ=70.99;MQ0=9;MQRankSum=-0.244;QD=15.80;ReadPosRankSum=2.755;VQSLOD=1.9780;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:8:8.98:0,9,72	1/1:2,0:2:2.88:15,3,0	0/1:32,0:10:1.63:10,0,2	0/0:54,0:19:18.05:0,18,96	1/1:4,0:4:3.48:57,3,0	1/1:4,0:4:9.03:168,9,0	1/1:1,0:1:3:25,3,0	1/1:30,0:29:56.18:524,56,0	1/1:2,0:2:3:25,3,0	1/1:2,0:2:3:28,3,0	./.	1/1:3,0:3:6.02:111,6,0	1/1:3,0:3:5.95:74,6,0	1/1:2,0:2:3.01:55,3,0	1/1:0,5:5:6.02:107,6,0	./.	1/1:5,4:10:11.52:105,12,0	1/1:7,1:8:9.59:125,10,0	1/1:9,0:9:26.96:336,27,0	./.	./.	./.	./.	./.	1/1:5,4:9:5:79,5,0	1/1:6,0:6:15.02:219,15,0	1/1:2,0:2:6.02:112,6,0	1/1:6,0:5:14.98:151,15,0
chr10	90549156	.	ATG	A	1760.56	PASS	AB=1.000;AC=37;AF=0.881;AN=42;BaseQRankSum=-2.073;DP=212;FS=1.188;HRun=0;HaplotypeScore=66.9603;InbreedingCoeff=0.3491;MQ=69.81;MQ0=9;MQRankSum=-0.308;QD=12.40;ReadPosRankSum=2.700;VQSLOD=3.3091;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:10:14.97:0,15,121	1/1:2,0:2:2.88:15,3,0	1/1:28,0:10:2.08:14,2,0	0/0:54,0:17:14.60:0,15,73	1/1:5,0:5:6.47:52,6,0	1/1:4,0:4:9.01:85,9,0	1/1:1,0:1:3:25,3,0	1/1:31,0:30:58.20:577,58,0	1/1:2,0:2:3:25,3,0	1/1:1,0:1:3:28,3,0	./.	1/1:3,0:3:6.01:56,6,0	1/1:3,0:3:5.95:46,6,0	1/1:3,0:3:6:52,6,0	1/1:5,0:5:6.01:57,6,0	./.	1/1:10,0:10:8.87:70,9,0	0/1:8,0:8:16.82:60,0,17	1/1:3,9:12:35.93:310,36,0	./.	./.	./.	./.	./.	1/1:9,0:9:9.01:95,9,0	1/1:6,0:6:15.01:136,15,0	1/1:2,0:2:6.01:57,6,0	1/1:6,0:5:14.97:123,15,0
chr10	90549170	.	G	GTA	167.04	PASS	AB=1.000;AC=3;AF=0.063;AN=48;BaseQRankSum=-2.371;DP=227;FS=3.698;HRun=0;HaplotypeScore=70.2550;InbreedingCoeff=0.2644;MQ=71.37;MQ0=5;MQRankSum=1.591;QD=4.64;ReadPosRankSum=0.421;VQSLOD=2.1949;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,10:11:15.05:253,15,0	0/0:2,0:2:3.01:0,3,39	0/1:24,0:10:0.06:0,0,54	0/0:43,0:14:1.91:0,2,5	0/0:9,0:9:14.77:0,15,177	0/0:6,0:6:15.05:0,15,193	0/0:3,0:3:9.03:0,9,115	0/0:43,0:42:99:0,105,1259	0/0:1,0:1:3.01:0,3,39	0/0:1,0:1:3.01:0,3,39	0/0:2,0:2:3:0,3,25	0/0:3,0:3:6.02:0,6,76	0/0:3,0:3:6.02:0,6,77	0/0:3,0:3:6.02:0,6,77	0/0:6,0:6:9.02:0,9,102	0/0:2,0:2:3:0,3,25	0/0:9,0:9:8.99:0,9,97	0/0:8,0:8:15.05:0,15,193	0/0:13,0:13:36.12:0,36,463	./.	0/0:1,0:1:3.01:0,3,38	./.	./.	./.	0/0:11,0:11:15.05:0,15,193	0/0:6,0:6:16.86:0,17,185	0/0:5,0:5:15.05:0,15,192	0/0:6,0:6:18.06:0,18,232
chr10	90552405	.	TA	T	6820.60	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-2.182;DP=524;FS=0.000;HRun=9;HaplotypeScore=113.7591;InbreedingCoeff=0.9241;MQ=73.50;MQ0=1;MQRankSum=-2.840;QD=15.33;ReadPosRankSum=4.974;VQSLOD=4.4391;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:22:37.53:0,38,234	1/1:2,4:6:11.50:91,11,0	0/0:28,0:22:7.63:0,8,208	0/0:28,0:20:9.62:0,10,118	1/1:28,0:28:52.30:304,52,0	1/1:12,0:12:29.24:169,29,0	1/1:15,0:15:23.39:134,23,0	1/1:21,0:20:24.91:147,25,0	1/1:18,0:18:46.72:269,47,0	1/1:1,19:20:56.96:500,57,0	1/1:2,20:22:51.01:467,51,0	1/1:8,0:8:17.38:102,17,0	1/1:12,0:12:29.24:168,29,0	1/1:12,0:12:26.28:151,26,0	1/1:5,11:16:32.37:319,32,0	1/1:2,21:23:54.03:493,54,0	1/1:2,19:21:25.06:315,25,0	1/1:1,22:23:51.03:466,51,0	1/1:16,0:16:38.03:222,38,0	1/1:26,0:26:64.26:375,64,0	1/1:7,0:7:14.62:86,15,0	1/1:16,0:16:20.36:119,20,0	1/1:25,0:25:25.02:247,25,0	1/1:11,0:11:20.40:118,20,0	1/1:1,23:24:63.03:576,63,0	1/1:12,1:13:35.17:215,35,0	1/1:33,0:33:81.88:475,82,0	1/1:17,0:17:49.72:291,50,0
chr10	90552413	.	AAG	A	9831.77	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=0.370;DP=534;FS=0.437;HRun=0;HaplotypeScore=114.4860;InbreedingCoeff=0.8644;MQ=78.06;MQ0=1;MQRankSum=-3.506;QD=24.46;ReadPosRankSum=5.926;VQSLOD=5.3713;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:53.97:0,54,565	0/0:8,0:8:17.47:0,17,106	0/0:31,0:24:43.56:0,44,507	0/0:32,0:24:13.54:0,14,260	1/1:0,31:31:74.51:824,75,0	1/1:0,11:11:30.10:428,30,0	1/1:0,15:15:24.08:342,24,0	1/1:8,10:17:10.25:289,10,0	1/1:0,19:19:51.12:703,51,0	1/1:20,0:20:32.91:220,33,0	0/1:21,0:21:16.23:99,0,16	1/1:0,10:10:18.06:258,18,0	1/1:0,14:14:30.02:402,30,0	1/1:0,12:13:27:358,27,0	0/0:15,0:15:7.31:0,7,73	1/1:21,0:21:33.28:108,33,0	0/0:22,0:22:33.31:0,33,132	1/1:23,0:23:24.91:115,25,0	1/1:0,13:13:39.08:534,39,0	1/1:0,29:29:84.63:1009,85,0	1/1:0,8:8:14.96:190,15,0	1/1:0,15:15:35.74:390,36,0	1/1:1,22:23:32.35:701,32,0	1/1:0,9:9:21.07:299,21,0	1/1:24,0:24:38.76:173,39,0	1/1:1,12:13:38.76:481,39,0	1/1:0,32:33:84.20:1176,84,0	1/1:0,19:19:51.17:733,51,0
chr10	90552414	.	AG	A	3707.83	PASS	AB=0.981;AC=44;AF=0.786;AN=56;BaseQRankSum=3.234;DP=537;FS=17.102;HRun=10;HaplotypeScore=129.1826;InbreedingCoeff=0.3774;MQ=78.69;MQ0=1;MQRankSum=-2.546;QD=8.26;ReadPosRankSum=6.179;VQSLOD=0.5526;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:44.78:0,45,345	0/1:7,1:8:18.15:18,0,57	0/0:30,1:24:7.44:0,7,270	0/0:33,0:25:7.54:0,8,127	1/1:31,0:31:64.13:365,64,0	1/1:11,0:11:28.89:154,29,0	1/1:15,0:15:23.06:123,23,0	1/1:15,2:17:13.91:108,14,0	1/1:19,0:19:49.12:265,49,0	0/1:21,0:21:17.59:18,0,23	0/1:21,0:21:2.94:3,0,34	1/1:10,0:10:17.25:93,17,0	1/1:14,0:14:25.98:138,26,0	1/1:13,0:13:23.08:123,23,0	0/1:16,0:16:23.04:46,0,23	1/1:21,0:21:23.28:74,23,0	0/1:23,0:23:11.58:12,0,49	1/1:23,0:23:0.53:20,1,0	1/1:13,0:13:34.72:186,35,0	1/1:29,0:29:76.57:427,77,0	1/1:8,0:8:11.60:63,12,0	1/1:15,0:15:34.96:198,35,0	1/1:22,0:22:52.24:287,52,0	1/1:9,0:9:20.24:108,20,0	0/1:24,0:24:0.12:13,0,0	1/1:13,0:13:33.18:181,33,0	1/1:33,0:33:78.07:419,78,0	1/1:19,0:19:49.32:267,49,0
chr10	90552513	.	A	AAAAACAAAACAAAACAAAACAAAAC	104543.44	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-3.717;DP=681;FS=1.701;HRun=0;HaplotypeScore=436.4905;InbreedingCoeff=0.9440;MQ=57.38;MQ0=0;MQRankSum=-7.178;QD=167.54;ReadPosRankSum=0.897;VQSLOD=4.1327;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:54.19:0,54,2920	1/1:17,0:17:42.14:3565,42,0	0/0:15,0:13:12.04:0,12,465	0/0:15,0:13:9.03:0,9,274	1/1:35,1:37:75.26:6052,75,0	1/1:21,0:22:60.20:4201,60,0	1/1:20,0:20:48.16:2937,48,0	1/1:37,0:37:39.09:1369,39,0	1/1:18,3:22:45.15:4168,45,0	1/1:29,0:29:75.26:6665,75,0	1/1:26,0:26:57.20:4489,57,0	1/1:16,1:18:42.14:4079,42,0	1/1:25,1:26:66.23:6298,66,0	1/1:19,0:19:48.14:3484,48,0	1/1:35,0:35:87.27:7081,87,0	1/1:37,0:37:78.27:5679,78,0	1/1:24,0:24:38.50:3904,38,0	1/1:16,0:16:12.04:1114,12,0	1/1:33,0:33:51.17:2745,51,0	1/1:34,4:38:84.29:7361,84,0	1/1:11,0:11:21.05:1517,21,0	1/1:17,0:17:36.12:2804,36,0	1/1:22,0:22:54.14:3324,54,0	1/1:12,2:14:27.09:2261,27,0	1/1:31,0:31:69.24:6036,69,0	1/1:32,1:33:81.27:7114,81,0	1/1:24,2:26:60.21:5795,60,0	1/1:14,0:14:12.04:502,12,0
chr10	90552533	.	CA	C	697.01	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.541;DP=686;FS=1.941;HRun=4;HaplotypeScore=91.8384;InbreedingCoeff=0.9962;MQ=57.48;MQ0=0;MQRankSum=5.087;QD=27.88;ReadPosRankSum=1.820;VQSLOD=3.1596;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:66.20:792,66,0	0/0:20,0:20:51.04:0,51,646	0/0:21,0:18:50.98:0,51,622	0/0:16,0:14:35.87:0,36,424	0/0:33,0:33:56.27:0,56,694	0/0:25,0:25:63.16:0,63,737	0/0:25,0:25:69.02:0,69,853	0/0:29,0:29:71.80:0,72,851	0/0:24,0:24:47.93:0,48,511	0/0:33,0:33:86.56:0,87,907	0/0:25,0:25:41.99:0,42,517	0/0:18,0:18:38.83:0,39,374	0/0:26,0:26:65.92:0,66,746	0/0:18,0:18:45.05:0,45,553	0/0:36,0:36:86.89:0,87,991	0/0:31,0:31:60:0,60,691	0/0:25,0:25:53.79:0,54,557	0/0:10,0:10:23.98:0,24,269	0/0:29,0:29:71.15:0,71,728	0/0:42,0:42:77.71:0,78,804	0/0:12,0:12:26.88:0,27,347	0/0:19,0:19:38.97:0,39,449	0/0:25,0:25:56.86:0,57,672	0/0:15,0:15:38.25:0,38,445	0/0:27,0:27:53.84:0,54,580	0/0:35,0:35:98.85:0,99,1104	0/0:29,0:29:68.94:0,69,789	0/0:13,0:13:33.06:0,33,415
chr10	90553381	.	AAAAAGG	A	185.34	PASS	AB=0.905;AC=3;AF=0.054;AN=56;BaseQRankSum=2.309;DP=602;FS=1.573;HRun=0;HaplotypeScore=172.2103;InbreedingCoeff=-0.0801;MQ=49.74;MQ0=23;MQRankSum=1.960;QD=2.29;ReadPosRankSum=-5.710;VQSLOD=0.6939;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,3273	0/0:9,0:7:21.07:0,21,584	0/1:39,0:6:9.11:9,0,150	0/0:30,0:11:6.36:0,6,176	0/0:34,0:33:64.73:0,65,1553	0/0:14,0:14:30.06:0,30,762	0/0:16,0:16:30.09:0,30,721	0/1:18,12:29:99:231,0,989	0/0:18,0:18:45.15:0,45,1219	0/0:21,0:21:7.61:0,8,1346	0/0:21,0:21:44.72:0,45,1082	0/0:20,0:19:35.24:0,35,1290	0/0:16,0:16:1.55:0,2,1009	0/0:19,0:19:39.12:0,39,1055	0/0:22,0:22:1.57:0,2,1156	0/0:21,0:21:48.16:0,48,1243	0/0:27,0:27:57.63:0,58,1361	0/0:16,0:15:23.99:0,24,602	0/0:26,0:24:36.38:0,36,1571	0/0:29,0:28:72.19:0,72,1980	0/1:12,0:12:40.75:41,0,486	0/0:15,0:15:39.02:0,39,885	0/0:22,0:22:60.14:0,60,1243	0/0:19,0:19:33.07:0,33,846	0/0:23,0:23:54.13:0,54,1161	0/0:22,0:21:15.96:0,16,1463	0/0:18,0:18:20.86:0,21,1274	0/0:5,0:5:12.04:0,12,325
chr10	90553387	.	G	GAAAAAAAAGA	23533.30	PASS	AB=0.985;AC=52;AF=0.929;AN=56;BaseQRankSum=-5.743;DP=739;FS=3.122;HRun=0;HaplotypeScore=175.0293;InbreedingCoeff=0.4676;MQ=50.23;MQ0=20;MQRankSum=-4.123;QD=33.67;ReadPosRankSum=-0.530;VQSLOD=4.4084;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:87.02:0,87,2013	1/1:4,5:10:12.01:476,12,0	0/1:41,0:6:12.42:12,0,64	0/1:31,0:13:6.08:6,0,131	1/1:21,16:42:30.05:1157,30,0	1/1:3,16:20:21.04:1023,21,0	1/1:9,7:17:15.02:608,15,0	1/1:28,0:28:36.44:451,36,0	1/1:13,10:24:11.63:584,12,0	1/1:12,14:36:67.40:2310,67,0	1/1:8,9:21:26.95:1032,27,0	1/1:10,12:21:28.21:1265,28,0	1/1:13,5:22:8.95:328,9,0	1/1:9,7:19:15.02:721,15,0	1/1:10,13:25:24.04:1064,24,0	1/1:14,9:25:11.59:548,12,0	1/1:14,15:33:33.98:1408,34,0	1/1:6,11:23:14.53:605,15,0	1/1:20,8:31:35.03:1372,35,0	1/1:16,17:36:29.93:1111,30,0	1/1:12,0:12:12.01:293,12,0	1/1:7,11:19:15:731,15,0	1/1:9,15:27:30.02:1332,30,0	1/1:10,12:25:17.86:781,18,0	1/1:11,19:33:21.93:1549,22,0	1/1:17,14:36:31.61:1656,32,0	1/1:13,8:25:14.68:525,15,0	1/1:1,7:11:12.04:585,12,0
chr10	90554668	.	C	CTT	27717.52	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-10.576;DP=637;FS=2.307;HRun=2;HaplotypeScore=62.9463;InbreedingCoeff=0.9941;MQ=86.63;MQ0=2;MQRankSum=-7.658;QD=48.97;ReadPosRankSum=4.388;VQSLOD=4.7765;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.22:0,66,972	1/1:0,8:8:18.06:337,18,0	0/0:23,0:23:62.67:0,63,842	0/0:22,0:21:54.17:0,54,762	1/1:0,31:31:93.28:1688,93,0	1/1:0,23:24:60.21:1124,60,0	1/1:2,20:22:54.15:977,54,0	1/1:4,28:32:84.26:1513,84,0	1/1:1,15:16:45.15:843,45,0	1/1:3,30:33:90.31:1679,90,0	1/1:1,25:27:75.26:1379,75,0	1/1:2,11:13:33.08:583,33,0	1/1:2,20:22:57.20:1068,57,0	1/1:1,20:21:57.20:1068,57,0	1/1:1,29:30:78.27:1461,78,0	1/1:2,26:28:78.23:1426,78,0	1/1:1,19:19:54.19:1012,54,0	1/1:2,20:22:54.10:939,54,0	1/1:4,15:20:57.15:954,57,0	1/1:4,34:38:96.33:1797,96,0	1/1:0,14:14:39.13:731,39,0	1/1:1,14:15:33.07:582,33,0	1/1:2,24:26:66.23:1237,66,0	1/1:0,18:19:48.16:899,48,0	1/1:0,22:21:63.22:1181,63,0	1/1:0,22:22:66.23:1230,66,0	1/1:3,28:33:90.31:1672,90,0	1/1:0,6:7:18.06:337,18,0
chr10	90556188	.	A	AGG	3505.07	PASS	AB=0.978;AC=32;AF=0.593;AN=54;BaseQRankSum=-3.076;DP=461;FS=3.366;HRun=1;HaplotypeScore=127.7032;InbreedingCoeff=-0.1746;MQ=51.75;MQ0=17;MQRankSum=1.728;QD=9.01;ReadPosRankSum=1.687;VQSLOD=0.6663;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:4.21:0,4,62	./.	0/0:11,0:5:3.01:0,3,46	0/0:22,0:6:5.97:0,6,45	1/1:15,1:16:8.88:151,9,0	0/1:28,0:28:18.51:249,0,19	0/1:16,1:15:31.66:80,0,32	0/1:17,0:15:7.28:224,0,7	0/1:16,0:15:3.53:78,0,4	0/1:15,0:14:45.45:64,0,45	1/1:15,0:15:13.01:78,13,0	0/1:20,0:20:9.66:199,0,10	0/1:18,0:18:57.06:143,0,57	1/1:18,0:17:0.99:183,1,0	1/1:16,1:16:32.27:237,32,0	0/1:14,0:14:6.60:188,0,7	0/1:16,1:15:8.74:182,0,9	0/1:18,0:18:43.42:138,0,43	0/1:10,0:10:50.34:67,0,50	1/1:13,0:12:20.69:143,21,0	0/1:14,3:17:56.91:57,0,69	1/1:22,0:21:15.45:247,15,0	1/1:21,0:18:35.74:275,36,0	0/1:19,1:20:21.29:129,0,21	1/1:17,0:16:23.28:149,23,0	0/0:15,0:15:0.47:0,0,81	1/1:16,0:15:29.90:232,30,0	0/1:7,0:3:11.02:11,0,14
chr10	90556191	.	GAGA	G	3134.91	PASS	AB=0.793;AC=25;AF=0.446;AN=56;BaseQRankSum=3.024;DP=461;FS=2.652;HRun=0;HaplotypeScore=133.4975;InbreedingCoeff=-0.6163;MQ=49.85;MQ0=19;MQRankSum=1.954;QD=7.88;ReadPosRankSum=11.394;VQSLOD=1.3104;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:4.74:0,5,98	0/0:2,0:2:2.74:0,3,12	0/0:10,0:4:3.01:0,3,74	0/0:19,0:5:6.02:0,6,99	0/1:13,3:16:49.58:119,0,50	0/1:19,11:30:64.70:339,0,65	0/1:11,6:15:64.08:64,0,78	0/1:16,1:13:40.85:41,0,116	0/1:13,4:16:45.03:168,0,45	0/1:9,5:13:77.26:177,0,77	1/1:8,6:14:8.48:87,8,0	0/1:13,7:20:99:209,0,115	0/1:12,7:19:92.73:206,0,93	0/1:13,5:17:22.24:247,0,22	0/1:14,4:17:62.61:116,0,63	1/1:11,3:14:5.98:222,6,0	0/1:15,2:15:99:139,0,106	0/1:14,4:18:78:117,0,78	0/1:7,3:10:53.18:53,0,138	0/1:9,3:11:14.63:78,0,15	0/1:13,3:16:40.89:178,0,41	0/1:17,6:22:34.13:213,0,34	0/1:14,6:17:75.34:78,0,75	0/1:16,4:20:34.88:35,0,70	0/1:11,7:17:29.04:145,0,29	0/1:9,5:14:67.40:166,0,67	0/1:12,4:15:56.23:94,0,56	0/0:9,0:5:8.96:0,9,80
chr10	90556194	.	A	AGAGG	6994.02	PASS	AB=0.787;AC=50;AF=0.893;AN=56;BaseQRankSum=-0.627;DP=440;FS=2.312;HRun=0;HaplotypeScore=132.2773;InbreedingCoeff=0.3357;MQ=46.23;MQ0=19;MQRankSum=0.747;QD=16.65;ReadPosRankSum=1.912;VQSLOD=4.8712;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,12:21:3.63:140,0,4	1/1:2,0:2:3:27,3,0	0/0:7,0:2:3.01:0,3,57	0/0:13,0:3:2.99:0,3,23	1/1:13,0:13:3.39:154,3,0	1/1:31,0:31:70.71:751,71,0	1/1:16,0:15:15.08:260,15,0	1/1:15,0:11:23.39:208,23,0	1/1:16,0:15:27.74:298,28,0	1/1:14,0:13:16.89:316,17,0	1/1:16,0:16:18.87:201,19,0	1/1:20,0:20:32.46:449,32,0	1/1:19,0:19:47.38:426,47,0	1/1:16,0:15:36.45:385,36,0	1/1:15,0:15:30:286,30,0	1/1:15,0:15:35.50:457,35,0	0/1:16,0:15:1.32:235,0,1	1/1:16,0:16:31.82:285,32,0	1/1:8,0:8:0.82:110,1,0	1/1:10,0:9:14.21:169,14,0	1/1:14,0:17:1.29:229,1,0	1/1:23,0:22:44.72:419,45,0	1/1:19,0:16:11.93:156,12,0	1/1:19,0:20:17.08:175,17,0	1/1:18,0:17:20.60:265,21,0	1/1:15,0:15:25.61:289,26,0	1/1:15,0:14:23.95:256,24,0	1/1:10,0:6:8.46:50,8,0
chr10	90556206	.	AGAGG	A	667.53	PASS	AB=0.924;AC=14;AF=0.259;AN=54;BaseQRankSum=-4.250;DP=513;FS=22.125;HRun=0;HaplotypeScore=163.8031;InbreedingCoeff=-0.2289;MQ=44.24;MQ0=18;MQRankSum=0.680;QD=2.75;ReadPosRankSum=-0.265;VQSLOD=1.2094;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:3.18:3,0,95	0/0:7,0:7:2.83:0,3,27	1/1:6,0:2:2.94:18,3,0	./.	0/1:17,0:17:1.91:2,0,56	0/0:31,0:31:46.90:0,47,358	0/1:21,0:19:28.70:29,0,67	0/0:20,0:16:23.83:0,24,192	0/0:22,0:21:19.57:0,20,159	0/1:10,11:20:99:214,0,177	0/1:9,13:22:30.76:40,0,31	0/1:24,0:24:27.92:28,0,181	0/0:19,0:19:42.14:0,42,276	0/0:17,0:16:31.65:0,32,187	0/1:26,1:26:99:112,0,130	0/1:17,4:21:99:240,0,180	0/0:20,0:18:0.01:0,0,142	0/1:12,0:12:67.40:67,0,107	0/0:5,0:5:7.87:0,8,56	0/0:14,0:13:10.83:0,11,53	0/0:18,0:17:5:0,5,105	0/0:20,0:19:26.87:0,27,195	0/0:18,0:16:14.36:0,14,95	0/0:26,0:26:18.63:0,19,183	0/0:11,14:24:15.11:0,15,66	0/1:17,0:17:35.38:35,0,174	0/1:22,0:21:8.53:9,0,98	0/1:13,0:9:12.55:13,0,100
chr10	90556210	.	GGA	G	2090.73	PASS	AB=0.832;AC=32;AF=0.615;AN=52;BaseQRankSum=0.297;DP=536;FS=0.733;HRun=0;HaplotypeScore=148.9484;InbreedingCoeff=0.1966;MQ=45.05;MQ0=24;MQRankSum=1.376;QD=4.97;ReadPosRankSum=2.988;VQSLOD=2.8563;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:0:0,0,0	0/0:6,0:6:3.48:0,3,46	0/0:4,0:1:1.25:0,1,3	./.	0/1:11,10:21:13.70:23,0,14	1/1:20,16:36:20.96:300,21,0	1/1:12,8:19:14.44:146,14,0	0/1:23,2:21:21.28:124,0,21	1/1:15,10:24:3.36:116,3,0	0/0:22,0:21:13.15:0,13,217	1/1:22,0:22:1.06:5,1,0	1/1:24,2:25:29.52:275,30,0	1/1:10,9:19:23.64:274,24,0	0/1:13,2:14:4.34:29,0,4	0/1:29,0:28:1.07:1,0,221	0/1:19,0:19:3.48:3,0,80	0/0:21,0:18:12.97:0,13,149	0/0:11,0:13:6.20:0,6,69	1/1:4,1:5:3.01:34,3,0	1/1:11,5:15:5.73:37,6,0	1/1:12,5:16:6.02:69,6,0	0/1:17,8:23:21.33:86,0,21	0/1:11,10:19:8.15:91,0,8	1/1:10,15:25:7.88:255,8,0	./.	0/1:11,5:17:8.97:158,0,9	1/1:14,7:20:17.53:181,18,0	1/1:16,0:9:3.40:35,3,0
chr10	90556638	.	CAT	C	6350.52	PASS	AB=0.575;AC=47;AF=0.870;AN=54;BaseQRankSum=-1.502;DP=357;FS=4.106;HRun=0;HaplotypeScore=50.9939;InbreedingCoeff=0.2822;MQ=63.95;MQ0=5;MQRankSum=0.606;QD=19.01;ReadPosRankSum=2.649;VQSLOD=4.1228;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:9.03:0,9,141	1/1:2,3:5:6.02:74,6,0	./.	0/0:11,0:4:3.93:0,4,12	1/1:8,14:22:27.07:320,27,0	0/1:3,13:16:7.73:268,0,8	1/1:0,8:8:12.04:148,12,0	0/1:22,28:50:99:840,0,114	1/1:1,10:11:9.03:111,9,0	1/1:2,16:18:45.10:521,45,0	1/1:1,9:10:15.05:185,15,0	1/1:1,5:5:9.03:111,9,0	1/1:4,9:13:12.04:148,12,0	1/1:1,5:6:12.04:148,12,0	1/1:0,11:12:23.91:272,24,0	1/1:2,7:9:12.04:148,12,0	1/1:4,20:24:48.15:591,48,0	1/1:3,11:14:30.09:369,30,0	1/1:5,9:13:29.88:328,30,0	1/1:5,7:12:12.04:148,12,0	1/1:1,1:2:3.01:37,3,0	1/1:1,0:1:2.99:24,3,0	1/1:2,6:8:12.03:148,12,0	1/1:1,0:1:3:25,3,0	1/1:1,12:15:21.07:258,21,0	1/1:6,17:24:53.78:578,54,0	1/1:6,17:23:39.12:478,39,0	0/1:1,6:8:8.11:76,0,8
chr10	90556928	.	TG	T	11706.02	PASS	AB=1.000;AC=52;AF=0.929;AN=56;BaseQRankSum=-5.447;DP=546;FS=3.088;HRun=3;HaplotypeScore=73.3174;InbreedingCoeff=0.6999;MQ=71.27;MQ0=4;MQRankSum=-2.697;QD=22.51;ReadPosRankSum=4.541;VQSLOD=4.4445;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:0.13:0,0,89	1/1:0,7:7:18.06:222,18,0	0/0:26,0:19:23.28:0,23,323	0/1:25,0:18:2.20:2,0,294	1/1:1,17:18:50.36:487,50,0	1/1:7,14:21:53.41:625,53,0	1/1:2,18:20:51.13:603,51,0	1/1:3,33:36:98.92:1043,99,0	1/1:1,7:8:8.73:111,9,0	1/1:22,0:22:56.93:475,57,0	1/1:11,0:11:26.91:216,27,0	1/1:4,11:14:16.10:217,16,0	1/1:4,21:25:38.94:469,39,0	1/1:2,17:19:38.99:428,39,0	1/1:3,23:26:55.86:699,56,0	1/1:31,0:31:68.89:565,69,0	1/1:0,28:28:66.16:794,66,0	1/1:15,0:15:44.88:360,45,0	1/1:6,17:21:56.93:651,57,0	1/1:0,15:15:35.59:328,36,0	1/1:3,13:16:14.35:234,14,0	1/1:0,4:4:11.89:109,12,0	1/1:1,14:15:33.05:405,33,0	1/1:5,14:18:48.46:583,48,0	1/1:9,1:10:23.99:211,24,0	1/1:6,10:16:41.89:472,42,0	1/1:4,33:37:84.54:1009,85,0	1/1:5,8:13:36:388,36,0
chr10	90556930	.	GGA	G	5662.60	PASS	AB=0.979;AC=45;AF=0.804;AN=56;BaseQRankSum=0.609;DP=536;FS=27.787;HRun=0;HaplotypeScore=101.7798;InbreedingCoeff=0.4575;MQ=71.43;MQ0=4;MQRankSum=-2.969;QD=12.28;ReadPosRankSum=6.676;VQSLOD=2.9092;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:62.24:0,62,423	1/1:7,0:7:13.14:39,13,0	0/0:26,0:19:46.76:0,47,463	0/0:25,0:18:33.59:0,34,451	1/1:18,0:18:20.62:160,21,0	1/1:19,2:21:26.60:240,27,0	1/1:18,2:20:37.49:193,37,0	0/1:36,2:38:1.82:400,0,2	1/1:7,0:7:6.18:19,6,0	1/1:0,21:22:59.73:816,60,0	1/1:4,5:9:26.98:332,27,0	0/1:13,0:12:2.18:23,0,2	1/1:21,1:22:29.12:126,29,0	1/1:17,0:17:12.74:71,13,0	1/1:25,0:25:26.91:106,27,0	1/1:0,29:31:69.23:1065,69,0	1/1:29,0:29:24.14:129,24,0	1/1:3,12:15:45.07:639,45,0	1/1:20,2:20:24.82:196,25,0	1/1:15,0:15:6.11:84,6,0	0/1:15,0:15:9.06:37,0,9	0/1:5,0:5:17.43:35,0,17	1/1:14,0:14:22.77:69,23,0	1/1:19,0:18:23.04:145,23,0	1/1:1,9:10:23.11:343,23,0	0/1:16,1:17:18.18:126,0,18	1/1:35,1:37:10.99:178,11,0	1/1:12,1:13:15.43:92,15,0
chr10	90556931	.	GA	G	3455.51	PASS	AB=0.990;AC=45;AF=0.804;AN=56;BaseQRankSum=2.608;DP=545;FS=17.879;HRun=12;HaplotypeScore=103.0360;InbreedingCoeff=-0.1925;MQ=71.50;MQ0=4;MQRankSum=-2.391;QD=6.34;ReadPosRankSum=7.941;VQSLOD=0.1223;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:50.78:395,51,0	0/1:8,0:8:5.48:41,0,5	0/1:23,1:17:19.51:20,0,124	0/1:25,1:19:17.13:17,0,133	0/1:19,0:19:16.06:85,0,16	1/1:21,0:21:14.23:148,14,0	1/1:20,0:20:45.50:190,45,0	0/1:38,0:38:38.86:128,0,39	1/1:9,0:9:7.60:31,8,0	1/1:22,0:22:42.22:172,42,0	1/1:8,0:8:13.37:55,13,0	0/1:14,0:13:11.33:49,0,11	1/1:22,0:22:33.66:130,34,0	1/1:17,0:17:16.97:107,17,0	1/1:26,0:26:22.31:168,22,0	1/1:31,0:31:60.42:242,60,0	1/1:29,0:29:34.80:221,35,0	1/1:16,0:16:31.93:129,32,0	0/1:23,0:21:0.42:127,0,0	0/1:15,0:15:0.51:51,0,1	0/1:15,0:15:8.54:77,0,9	0/1:6,0:6:9.69:10,0,39	1/1:14,0:14:29.75:129,30,0	1/1:20,0:19:10.56:131,11,0	1/1:10,0:10:21.49:89,21,0	0/1:17,0:17:35.80:86,0,36	1/1:38,0:38:8.55:293,9,0	1/1:13,0:13:27.53:136,28,0
chr10	90557041	.	CT	C	8358.06	PASS	AB=0.964;AC=51;AF=0.911;AN=56;BaseQRankSum=0.792;DP=562;FS=22.157;HRun=12;HaplotypeScore=94.7773;InbreedingCoeff=0.8577;MQ=63.74;MQ0=5;MQRankSum=0.577;QD=16.07;ReadPosRankSum=3.593;VQSLOD=4.2220;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:30.95:0,31,481	1/1:0,7:7:17.92:139,18,0	0/0:20,0:11:11.08:0,11,62	0/1:25,1:15:1.02:1,0,174	1/1:5,19:24:50.72:394,51,0	1/1:1,16:17:47.81:371,48,0	1/1:3,19:22:44.81:347,45,0	1/1:8,23:31:65.72:508,66,0	1/1:1,10:10:17.93:139,18,0	1/1:3,19:21:56.77:440,57,0	1/1:5,15:20:47.78:369,48,0	1/1:6,11:17:17.92:139,18,0	1/1:0,13:13:35.86:278,36,0	1/1:5,10:15:20.86:162,21,0	1/1:3,12:15:29.88:231,30,0	1/1:6,25:31:68.65:533,69,0	1/1:3,28:31:68.73:533,69,0	1/1:2,18:20:47.81:371,48,0	1/1:4,9:12:20.89:162,21,0	1/1:2,18:20:47.79:371,48,0	1/1:5,15:20:35.80:278,36,0	1/1:5,14:19:38.78:301,39,0	1/1:3,18:21:44.76:348,45,0	1/1:3,24:27:59.38:463,59,0	1/1:4,10:14:29.87:232,30,0	1/1:2,18:19:53.79:417,54,0	1/1:3,24:26:62.73:487,63,0	1/1:2,14:16:46.83:342,47,0
chr10	90557897	.	TGGG	T	3652.04	PASS	AB=0.833;AC=49;AF=0.875;AN=56;BaseQRankSum=-6.988;DP=409;FS=0.000;HRun=15;HaplotypeScore=75.9024;InbreedingCoeff=0.6227;MQ=93.44;MQ0=4;MQRankSum=-5.091;QD=12.30;ReadPosRankSum=4.114;VQSLOD=0.8906;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:14:20.57:123,21,0	1/1:1,0:8:20.58:124,21,0	0/0:52,0:32:28.11:0,28,475	0/0:52,0:25:9.87:0,10,188	1/1:8,6:16:20.95:216,21,0	1/1:8,2:10:14.88:150,15,0	1/1:2,11:14:23.95:241,24,0	1/1:8,4:16:20.70:184,21,0	1/1:4,8:12:15:168,15,0	1/1:8,1:16:23.67:200,24,0	1/1:7,7:15:14.99:156,15,0	1/1:4,2:6:5.99:67,6,0	1/1:7,4:12:7.45:98,7,0	0/0:5,0:5:0:0,0,0	1/1:2,0:14:32.32:194,32,0	1/1:2,8:10:24.04:269,24,0	1/1:5,0:18:26.39:160,26,0	1/1:4,8:12:24.07:269,24,0	1/1:2,2:4:5.98:67,6,0	1/1:4,0:6:2.17:7,2,0	0/1:4,1:5:0:0,0,0	1/1:7,1:12:5.91:51,6,0	1/1:4,4:8:8.97:101,9,0	1/1:3,4:7:6:67,6,0	1/1:9,11:22:20.88:211,21,0	1/1:11,2:13:5.96:57,6,0	1/1:8,9:17:27.05:303,27,0	1/1:2,8:10:14.99:168,15,0
chr10	90558334	.	GGAC	G	32877.37	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=9.085;DP=831;FS=0.789;HRun=0;HaplotypeScore=133.8208;InbreedingCoeff=0.9991;MQ=83.37;MQ0=0;MQRankSum=-9.130;QD=45.47;ReadPosRankSum=6.300;VQSLOD=6.0197;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,160,3692	1/1:0,17:17:48.12:858,48,0	0/0:27,0:27:67.38:0,67,1791	0/0:28,0:28:84.06:0,84,1839	1/1:0,34:34:75.16:1303,75,0	1/1:0,38:37:90.26:1623,90,0	1/1:0,28:27:69.24:1284,69,0	1/1:0,37:37:99:1935,111,0	1/1:0,17:16:42.14:782,42,0	1/1:0,39:39:99:2086,117,0	1/1:1,24:25:57.11:1021,57,0	1/1:0,29:29:66.18:1176,66,0	1/1:0,28:28:66.18:1171,66,0	1/1:0,32:32:78.17:1377,78,0	1/1:0,43:43:99:2028,111,0	1/1:0,25:24:69.19:1228,69,0	1/1:1,27:28:57.15:1026,57,0	1/1:0,21:21:60.21:1118,60,0	1/1:0,22:22:66.17:1120,66,0	1/1:0,29:29:75.21:1358,75,0	1/1:0,54:53:99:2341,137,0	1/1:1,30:29:77.97:1417,78,0	1/1:0,26:26:54.19:1005,54,0	1/1:0,35:35:90.31:1657,90,0	1/1:0,14:14:30.10:558,30,0	1/1:1,26:27:81.25:1402,81,0	1/1:0,34:32:87.23:1574,87,0	1/1:0,10:8:24.08:430,24,0
chr10	90559251	.	GAGACAGACAGACAGAC	G	7878.18	PASS	AB=0.964;AC=44;AF=0.846;AN=52;BaseQRankSum=1.770;DP=433;FS=15.065;HRun=0;HaplotypeScore=153.2846;InbreedingCoeff=0.3634;MQ=63.72;MQ0=12;MQRankSum=2.050;QD=23.17;ReadPosRankSum=3.978;VQSLOD=3.0952;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:41:42.13:42,0,306	1/1:7,0:7:9.03:131,9,0	0/0:27,0:15:25.91:0,26,401	0/0:39,0:22:26.40:0,26,503	1/1:10,0:10:17.95:420,18,0	1/1:11,0:11:12.03:323,12,0	1/1:13,0:11:15.03:309,15,0	1/1:16,0:16:21.07:504,21,0	1/1:12,0:12:15.04:406,15,0	1/1:16,0:16:30.06:771,30,0	./.	0/1:5,0:6:0:0,0,0	1/1:13,0:13:27.09:762,27,0	1/1:2,8:10:3.48:135,3,0	1/1:18,0:18:2.58:69,3,0	1/1:9,0:9:12.04:267,12,0	0/1:22,0:21:17.98:54,0,18	1/1:5,12:17:2.63:134,3,0	1/1:7,8:14:0.05:411,0,0	1/1:7,0:7:9.01:167,9,0	1/1:24,0:24:33.09:911,33,0	1/1:8,0:8:18.04:429,18,0	./.	1/1:10,0:10:9.01:215,9,0	0/1:14,0:14:2.37:2,0,89	1/1:6,17:23:45.14:1021,45,0	1/1:7,7:14:3.01:134,3,0	1/1:4,0:3:9.03:260,9,0
chr10	90559267	.	CAGACAGACAGACAG	C	8526.33	PASS	AB=1.000;AC=45;AF=0.833;AN=54;BaseQRankSum=1.815;DP=382;FS=6.661;HRun=0;HaplotypeScore=118.5827;InbreedingCoeff=0.4217;MQ=55.56;MQ0=16;MQRankSum=1.430;QD=28.42;ReadPosRankSum=4.338;VQSLOD=3.2787;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:39:28.18:28,0,306	1/1:5,0:5:9.03:131,9,0	0/0:23,0:11:25.91:0,26,401	0/0:32,0:15:23.64:0,24,499	1/1:6,0:7:17.95:420,18,0	1/1:7,0:10:20.92:407,21,0	1/1:9,0:11:11.16:502,11,0	1/1:1,8:9:21.04:504,21,0	1/1:10,0:10:15.04:406,15,0	1/1:2,12:14:30:771,30,0	./.	1/1:4,0:5:2.77:15,3,0	1/1:10,0:12:33.11:842,33,0	1/1:9,0:8:3.48:103,3,0	1/1:11,0:12:3.50:110,3,0	1/1:6,0:8:14.96:298,15,0	0/1:22,0:21:47.37:91,0,47	1/1:14,0:15:11.08:193,11,0	0/1:13,0:12:10.27:356,0,10	1/1:5,0:6:12.02:198,12,0	1/1:23,0:27:32.79:935,33,0	1/1:8,0:8:21.05:465,21,0	1/1:2,7:8:2.90:16,3,0	1/1:7,0:8:9.01:215,9,0	0/0:14,0:14:10.66:0,11,101	1/1:22,0:21:43.54:986,44,0	1/1:8,0:8:5.93:118,6,0	1/1:4,0:5:15.05:416,15,0
chr10	90559269	.	GACAGACAGACAGAC	G	6482.92	PASS	AB=0.924;AC=46;AF=0.852;AN=54;BaseQRankSum=3.701;DP=381;FS=19.733;HRun=0;HaplotypeScore=123.3783;InbreedingCoeff=0.1190;MQ=53.84;MQ0=16;MQRankSum=2.132;QD=19.24;ReadPosRankSum=4.704;VQSLOD=2.2933;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:40:51.54:52,0,148	1/1:5,0:5:9.03:206,9,0	0/1:20,0:8:10.50:11,0,149	0/0:31,0:15:26.86:0,27,316	1/1:8,0:7:12.04:284,12,0	0/1:10,0:10:21.18:301,0,21	0/1:13,0:11:8.72:344,0,9	1/1:9,0:9:21.06:356,21,0	1/1:9,0:9:11.99:286,12,0	1/1:14,0:14:27.09:556,27,0	./.	1/1:5,0:5:0.89:2,1,0	1/1:11,0:11:33.09:620,33,0	1/1:9,0:8:3.48:91,3,0	1/1:1,10:11:3.50:127,3,0	1/1:8,0:8:14.93:215,15,0	0/1:4,20:23:14.41:107,0,14	1/1:15,0:15:11.74:205,12,0	0/1:13,0:12:1.44:211,0,1	1/1:7,0:6:8.96:114,9,0	1/1:29,0:29:32.75:694,33,0	1/1:8,0:8:18.03:312,18,0	1/1:9,0:8:0.89:2,1,0	1/1:9,0:9:6.02:144,6,0	1/1:13,0:14:14.95:124,15,0	1/1:22,0:21:41.56:681,42,0	1/1:8,0:8:6.02:122,6,0	1/1:6,0:5:15.05:318,15,0
chr10	90559277	.	GACAGACACACACACACACACACACACACAC	G	443.29	PASS	AB=0.961;AC=12;AF=0.214;AN=56;BaseQRankSum=1.632;DP=373;FS=28.978;HRun=0;HaplotypeScore=203.2686;InbreedingCoeff=-0.3196;MQ=52.55;MQ0=17;MQRankSum=1.901;QD=2.42;ReadPosRankSum=-0.720;VQSLOD=1.0382;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:4,34:37:11.80:232,0,12	0/1:5,0:5:35.80:36,0,271	0/0:13,0:3:5.19:0,5,29	0/0:23,0:8:5:0,5,51	0/1:9,0:8:5.76:6,0,736	0/0:12,0:12:24.08:0,24,1326	0/1:11,0:9:25.79:26,0,887	0/1:11,0:11:66.10:66,0,279	0/1:11,0:11:0.36:0,0,953	0/1:15,0:15:99:100,0,566	0/0:14,0:13:2.46:0,2,217	0/0:4,0:4:6.02:0,6,261	0/1:13,0:13:10.99:11,0,1246	0/0:10,0:9:5.31:0,5,352	0/0:11,0:11:1.99:0,2,134	0/0:7,0:7:6.49:0,6,282	0/0:26,0:24:12.04:0,12,766	0/0:15,0:15:12.04:0,12,546	0/0:16,0:15:18.52:0,19,643	0/0:6,0:5:8.96:0,9,468	0/1:28,0:28:10.43:10,0,1445	0/1:9,0:9:28.84:29,0,468	0/0:9,0:8:3.01:0,3,229	0/0:10,0:10:12.04:0,12,689	0/1:10,0:10:32.97:33,0,198	0/1:23,0:22:31.17:31,0,666	0/0:9,0:9:6.02:0,6,272	0/0:5,0:4:12.04:0,12,548
chr10	90559281	.	GAC	G	119.37	PASS	AB=0.945;AC=14;AF=0.280;AN=50;BaseQRankSum=3.634;DP=379;FS=14.088;HRun=0;HaplotypeScore=96.5926;InbreedingCoeff=-0.0754;MQ=51.14;MQ0=16;MQRankSum=-4.349;QD=0.74;ReadPosRankSum=3.595;VQSLOD=0.5213;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:35:2.84:14,3,0	1/1:5,0:5:3.01:33,3,0	./.	./.	0/0:9,0:8:6.02:0,6,84	0/1:10,1:11:21.30:21,0,139	0/1:10,1:9:17.55:18,0,143	0/0:12,0:12:5.87:0,6,36	0/1:11,1:12:20.57:21,0,114	0/0:17,0:17:3.01:0,3,42	0/0:16,0:15:5.58:0,6,83	0/0:6,0:6:6.02:0,6,80	0/0:12,0:12:15.05:0,15,197	0/1:10,0:9:0.08:0,0,37	1/1:11,0:11:3.73:22,4,0	0/1:6,0:6:7.80:8,0,36	0/0:26,0:24:0.25:0,0,23	0/1:15,2:17:11.13:59,0,11	0/0:16,0:16:1.76:0,2,40	0/0:8,0:7:9.03:0,9,125	0/1:32,0:31:25.17:25,0,107	0/0:5,3:8:6.02:0,6,84	0/0:10,0:9:3.01:0,3,40	0/0:10,0:10:6.02:0,6,84	./.	0/0:25,0:24:3.22:0,3,45	0/1:9,1:10:17.43:29,0,17	0/0:5,0:4:6.02:0,6,79
chr10	90561070	.	T	TGA	24630.99	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=7.333;DP=558;FS=6.491;HRun=0;HaplotypeScore=176.2912;InbreedingCoeff=0.9842;MQ=86.74;MQ0=0;MQRankSum=-11.422;QD=48.97;ReadPosRankSum=7.916;VQSLOD=4.3031;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:66.23:1169,66,0	1/1:0,13:13:39.13:699,39,0	0/0:34,0:34:87.29:0,87,1375	0/0:21,0:20:57.18:0,57,880	1/1:1,18:19:54.18:941,54,0	1/1:0,19:19:57.20:1003,57,0	1/1:0,16:16:45.15:767,45,0	1/1:0,18:19:57.18:994,57,0	1/1:0,21:21:60.21:1062,60,0	1/1:0,18:19:57.16:939,57,0	1/1:0,14:14:42.14:693,42,0	1/1:0,25:26:75.26:1311,75,0	1/1:0,16:17:42.14:741,42,0	1/1:0,23:24:72.25:1253,72,0	1/1:0,27:28:75.26:1328,75,0	1/1:3,20:23:66.21:1128,66,0	1/1:0,17:18:45.15:793,45,0	1/1:1,15:16:45.15:788,45,0	1/1:0,21:22:69.19:1140,69,0	1/1:0,15:15:42.14:744,42,0	1/1:2,32:34:99:1689,99,0	1/1:3,23:26:66.17:1167,66,0	1/1:0,14:14:39.13:688,39,0	1/1:2,17:19:48.12:845,48,0	1/1:0,13:13:39.13:689,39,0	1/1:0,22:22:66.23:1185,66,0	1/1:0,12:14:39.13:664,39,0	1/1:0,4:4:12.04:211,12,0
chr10	90561871	.	C	CCCAGTGAG	56626.99	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.470;DP=643;FS=2.798;HRun=0;HaplotypeScore=152.8855;InbreedingCoeff=0.9862;MQ=77.37;MQ0=0;MQRankSum=-10.841;QD=95.33;ReadPosRankSum=4.784;VQSLOD=5.6906;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,23:40:78.27:3357,78,0	1/1:4,8:12:30.10:1301,30,0	0/0:21,0:21:57.18:0,57,1288	0/0:28,0:28:72.24:0,72,1830	1/1:7,11:20:21.07:912,21,0	1/1:3,22:26:72.25:3145,72,0	1/1:4,14:20:47.37:1981,47,0	1/1:20,8:34:96.29:3237,96,0	1/1:6,11:17:45.15:1983,45,0	1/1:11,21:37:99:4094,105,0	1/1:5,7:14:18.53:786,19,0	1/1:9,15:26:66.23:2781,66,0	1/1:1,17:19:51.18:2249,51,0	1/1:6,27:36:96.33:4171,96,0	1/1:12,24:36:87.30:3793,87,0	1/1:7,11:18:42.10:1723,42,0	1/1:4,12:17:36.12:1590,36,0	1/1:2,7:12:21.07:929,21,0	1/1:9,9:20:51.17:1962,51,0	1/1:2,16:19:33.11:1449,33,0	1/1:7,10:17:24.08:1038,24,0	1/1:9,18:30:48.16:2101,48,0	1/1:3,17:23:39.13:1704,39,0	1/1:5,9:17:18.95:762,19,0	1/1:4,14:19:48.16:2071,48,0	1/1:8,22:31:84.29:3561,84,0	1/1:5,20:26:66.23:2887,66,0	1/1:0,8:8:24.08:1061,24,0
chr10	90562982	.	AG	A	1385.30	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.117;DP=744;FS=0.613;HRun=2;HaplotypeScore=99.6609;InbreedingCoeff=0.9839;MQ=86.37;MQ0=0;MQRankSum=-4.649;QD=34.63;ReadPosRankSum=1.387;VQSLOD=3.6790;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:40:99:1480,114,0	0/0:11,0:11:30.08:0,30,411	0/0:30,0:30:53.40:0,53,1125	0/0:25,0:25:62.95:0,63,813	0/0:18,0:18:51.17:0,51,764	0/0:20,0:20:60.20:0,60,898	0/0:36,0:36:99:0,108,1599	0/0:41,0:40:99:0,117,1702	0/0:19,0:19:57.19:0,57,852	0/0:24,0:24:72.24:0,72,1063	0/0:15,0:15:42.14:0,42,630	0/0:37,0:37:99:0,111,1662	0/0:31,0:31:93.32:0,93,1393	0/0:27,0:27:81.27:0,81,1214	0/0:47,0:47:99:0,141,2075	0/0:24,0:24:72.24:0,72,1078	0/0:26,0:26:77.85:0,78,1134	0/0:24,0:24:66.22:0,66,988	0/0:19,0:19:57.19:0,57,855	0/0:18,0:18:54.18:0,54,809	0/0:62,0:62:99:0,184,2700	0/0:26,0:26:75.24:0,75,1105	0/0:13,0:13:39.12:0,39,565	0/0:33,0:33:96.29:0,96,1409	0/0:28,0:28:84.27:0,84,1239	0/0:28,0:28:81.01:0,81,1159	0/0:17,0:17:51.17:0,51,764	0/0:5,0:5:15.05:0,15,225
chr10	90563889	.	GT	G	2711.89	PASS	AB=0.787;AC=19;AF=0.339;AN=56;BaseQRankSum=8.338;DP=590;FS=6.473;HRun=13;HaplotypeScore=63.6347;InbreedingCoeff=0.7482;MQ=69.99;MQ0=0;MQRankSum=0.501;QD=10.55;ReadPosRankSum=3.762;VQSLOD=3.1542;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,23:28:45.78:347,46,0	0/1:2,6:8:11.28:91,0,11	0/0:12,0:10:8.86:0,9,61	0/0:8,0:7:0:0,0,0	0/0:27,0:27:57.03:0,57,528	0/0:25,1:27:52.99:0,53,639	0/0:16,0:16:34.83:0,35,345	0/0:25,3:29:10.40:0,10,407	0/0:15,0:15:30.03:0,30,283	1/1:9,18:27:53.19:373,53,0	1/1:5,21:26:53.57:394,54,0	0/0:14,0:14:30.04:0,30,288	0/1:22,3:25:5.63:6,0,435	0/0:27,0:27:54.94:0,55,512	1/1:7,25:32:19.62:429,20,0	1/1:3,19:23:58.71:422,59,0	1/1:3,18:21:50.66:368,51,0	1/1:7,13:20:9.54:233,10,0	0/0:8,0:12:8.05:0,8,157	0/0:22,0:23:44.83:0,45,407	0/1:21,3:26:3.08:3,0,414	0/0:21,0:21:41.98:0,42,387	0/0:20,1:22:34.94:0,35,459	0/0:10,0:10:27.01:0,27,250	1/1:6,13:21:13.67:245,14,0	0/0:14,0:14:27.03:0,27,255	0/0:42,2:43:55:0,55,817	0/0:12,0:12:26.99:0,27,236
chr10	90564462	.	A	AT	9473.67	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-4.622;DP=627;FS=0.333;HRun=8;HaplotypeScore=109.2107;InbreedingCoeff=0.9984;MQ=69.15;MQ0=6;MQRankSum=-4.079;QD=26.61;ReadPosRankSum=0.867;VQSLOD=4.2349;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:80.89:0,81,733	0/0:10,0:10:27.01:0,27,247	0/0:33,0:23:36.93:0,37,386	0/0:26,0:17:24.98:0,25,189	1/1:7,14:22:36.11:415,36,0	1/1:4,15:19:48.10:539,48,0	1/1:5,13:18:42.08:470,42,0	1/1:4,23:27:69.20:796,69,0	1/1:4,18:22:57.11:632,57,0	0/0:17,0:17:42:0,42,377	0/0:22,0:22:51:0,51,467	1/1:4,28:32:50.79:839,51,0	1/1:3,14:17:42.12:481,42,0	1/1:2,18:20:51.15:580,51,0	0/0:25,0:25:57.02:0,57,521	0/0:27,0:27:63.03:0,63,576	0/0:30,0:30:80.93:0,81,720	0/0:17,0:17:48.03:0,48,439	1/1:7,19:26:60.18:693,60,0	1/1:2,21:23:63.19:727,63,0	1/1:4,10:13:26.86:282,27,0	1/1:3,22:25:66.19:755,66,0	1/1:2,9:11:21.06:243,21,0	1/1:5,17:22:42.08:466,42,0	0/0:25,0:25:72.04:0,72,658	1/1:5,13:18:22.91:431,23,0	1/1:6,23:29:69.17:780,69,0	1/1:1,10:11:30.09:346,30,0
chr10	90564473	.	GCATCCATC	G	6680.27	PASS	AC=34;AF=0.680;AN=50;BaseQRankSum=1.691;DP=581;FS=1.975;HRun=0;HaplotypeScore=186.1307;InbreedingCoeff=0.8857;MQ=61.86;MQ0=21;MQRankSum=-8.521;QD=21.21;ReadPosRankSum=2.649;VQSLOD=4.2090;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,5:32:9.03:220,9,0	0/0:6,0:9:11.99:0,12,141	./.	./.	1/1:13,3:16:12.04:290,12,0	1/1:9,7:16:24.08:568,24,0	1/1:14,3:17:12.04:269,12,0	./.	1/1:14,6:19:21.07:493,21,0	0/0:10,0:16:17.98:0,18,170	0/0:14,0:20:12.50:0,12,125	1/1:22,4:26:21.04:434,21,0	1/1:5,10:15:36.11:837,36,0	1/1:12,5:17:21.07:487,21,0	0/0:13,0:26:32.92:0,33,268	0/0:16,0:28:29.96:0,30,314	0/0:19,0:28:29.96:0,30,289	0/0:10,0:16:17.96:0,18,146	1/1:21,3:23:12.04:277,12,0	1/1:16,5:21:12.04:295,12,0	1/1:11,0:11:3.01:51,3,0	1/1:17,6:23:24.07:543,24,0	1/1:6,3:9:15.05:341,15,0	1/1:14,4:18:15.05:313,15,0	0/0:11,0:26:50.92:0,51,503	1/1:9,5:14:15.05:370,15,0	1/1:16,10:26:36.12:819,36,0	1/1:9,0:10:3.01:74,3,0
chr10	90564863	.	GA	G	14987.71	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.782;DP=606;FS=11.840;HRun=7;HaplotypeScore=92.6379;InbreedingCoeff=0.9945;MQ=84.05;MQ0=0;MQRankSum=-9.481;QD=26.48;ReadPosRankSum=6.016;VQSLOD=4.1239;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:31:78.17:796,78,0	1/1:0,13:13:27.06:275,27,0	0/0:22,0:22:55.76:0,56,636	0/0:18,0:17:38.26:0,38,428	1/1:1,23:24:69.16:704,69,0	1/1:2,27:29:78.18:796,78,0	1/1:0,11:11:27.06:276,27,0	1/1:4,27:31:78.16:788,78,0	1/1:0,12:12:36.08:367,36,0	1/1:0,23:23:69.16:704,69,0	1/1:0,24:24:57.13:582,57,0	1/1:2,16:18:45.10:459,45,0	1/1:1,18:19:51.12:520,51,0	1/1:0,20:20:54.12:551,54,0	1/1:1,23:24:57.13:582,57,0	1/1:0,27:27:66.15:673,66,0	1/1:5,18:23:54.12:551,54,0	1/1:1,12:13:36.08:367,36,0	1/1:0,24:24:72.16:735,72,0	1/1:0,29:29:84.19:855,84,0	1/1:1,13:14:36.08:367,36,0	1/1:2,15:17:45.10:459,45,0	1/1:4,21:25:60.13:612,60,0	1/1:3,23:26:63.14:643,63,0	1/1:2,28:30:75.17:765,75,0	1/1:1,28:29:84.19:857,84,0	1/1:2,21:23:51.12:520,51,0	1/1:1,6:7:18.04:184,18,0
chr10	90565360	.	C	CCT	169.33	PASS	AB=0.682;AC=12;AF=0.214;AN=56;BaseQRankSum=3.378;DP=410;FS=6.364;HRun=0;HaplotypeScore=83.6721;InbreedingCoeff=-0.1305;MQ=62.95;MQ0=6;MQRankSum=-4.705;QD=1.19;ReadPosRankSum=-2.557;VQSLOD=0.6969;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:22:0.16:183,0,0	0/0:5,0:5:11.98:0,12,125	0/1:5,0:3:1.69:2,0,29	0/0:12,0:9:2.10:0,2,92	0/0:17,0:29:66.51:0,67,518	0/0:8,0:16:13.07:0,13,206	0/1:6,0:15:1.83:2,0,178	0/0:16,0:36:76.72:0,77,651	0/0:2,0:12:7.90:0,8,76	0/0:6,0:18:42.82:0,43,276	0/1:2,1:9:19:19,0,86	0/0:5,0:10:16.27:0,16,118	0/1:4,0:12:3.61:4,0,99	0/1:5,0:15:34.68:35,0,102	0/0:15,0:17:38.99:0,39,562	0/0:4,0:14:29.86:0,30,175	0/0:25,0:28:77.85:0,78,963	0/1:6,0:15:8.38:8,0,103	0/0:8,0:14:33.27:0,33,288	0/0:6,0:14:18.33:0,18,187	0/0:0,0:2:2.60:0,3,10	0/0:2,0:4:8.06:0,8,65	0/1:4,0:12:6.34:6,0,116	0/1:6,0:14:21.39:21,0,59	0/1:3,0:13:11.74:12,0,77	0/0:5,0:9:1.25:0,1,94	0/0:13,0:22:5.37:0,5,272	0/1:6,0:5:0.43:0,0,87
chr10	90565599	.	AG	A	12919.13	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.156;DP=480;FS=2.537;HRun=3;HaplotypeScore=75.6919;InbreedingCoeff=0.8402;MQ=42.73;MQ0=14;MQRankSum=-0.471;QD=29.36;ReadPosRankSum=2.195;VQSLOD=4.5019;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:51.16:629,51,0	1/1:1,6:7:18.06:223,18,0	0/0:19,0:2:6.02:0,6,86	0/0:21,0:4:6.01:0,6,75	1/1:3,28:31:60.19:743,60,0	1/1:2,18:17:42.13:515,42,0	1/1:0,18:18:33.06:391,33,0	1/1:9,24:30:66.20:818,66,0	1/1:0,13:13:36.11:443,36,0	1/1:1,15:14:33.10:409,33,0	1/1:0,11:11:27.08:334,27,0	1/1:1,19:20:57.18:703,57,0	1/1:1,16:17:48.15:591,48,0	1/1:1,20:20:57.18:706,57,0	1/1:0,23:22:66.21:812,66,0	1/1:0,21:20:57.18:706,57,0	1/1:1,9:10:27.08:334,27,0	1/1:0,14:14:39.12:483,39,0	1/1:2,14:15:42.13:520,42,0	1/1:2,12:13:30.09:368,30,0	1/1:2,14:15:36.11:446,36,0	1/1:0,14:14:21.07:260,21,0	1/1:0,8:8:9.03:111,9,0	1/1:1,10:11:27.08:335,27,0	1/1:1,10:10:27.08:334,27,0	1/1:0,17:17:51.16:632,51,0	1/1:2,27:29:69.22:851,69,0	1/1:1,7:7:18.06:223,18,0
chr10	90565831	.	AGC	A	1212.53	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.176;DP=608;FS=0.734;HRun=0;HaplotypeScore=95.7903;InbreedingCoeff=0.9907;MQ=83.42;MQ0=0;MQRankSum=-4.308;QD=41.81;ReadPosRankSum=1.906;VQSLOD=5.4315;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:81.28:1307,81,0	0/0:12,0:12:36.09:0,36,658	0/0:18,0:18:18.01:0,18,849	0/0:20,0:20:57.20:0,57,1114	0/0:27,0:27:63.18:0,63,1180	0/0:21,0:21:63.22:0,63,1276	0/0:30,0:30:90.28:0,90,1754	0/0:31,0:30:90.29:0,90,1745	0/0:22,0:22:66.23:0,66,1341	0/0:24,0:24:60.20:0,60,1218	0/0:18,0:18:45.15:0,45,885	0/0:27,0:27:78.27:0,78,1582	0/0:25,0:25:75.26:0,75,1509	0/0:13,0:13:39.13:0,39,780	0/0:21,0:21:63.20:0,63,1229	0/0:24,0:24:72.23:0,72,1419	0/0:18,0:18:54.19:0,54,1077	0/0:23,0:23:69.24:0,69,1400	0/0:19,0:19:57.14:0,57,1083	0/0:19,0:19:57.15:0,57,1116	0/0:25,0:24:72.21:0,72,1372	0/0:17,0:17:42.14:0,42,844	0/0:14,0:14:39.13:0,39,788	0/0:30,0:30:90.29:0,90,1774	0/0:24,0:24:63.19:0,63,1242	0/0:25,0:25:75.26:0,75,1516	0/0:23,0:23:69.24:0,69,1394	0/0:9,0:9:27.09:0,27,548
chr10	90565974	.	CA	C	2008.27	PASS	AB=0.761;AC=17;AF=0.304;AN=56;BaseQRankSum=4.006;DP=609;FS=1.793;HRun=12;HaplotypeScore=78.8357;InbreedingCoeff=0.6368;MQ=79.19;MQ0=21;MQRankSum=1.001;QD=12.40;ReadPosRankSum=3.591;VQSLOD=3.9065;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:28:33.77:0,34,489	0/1:1,7:8:9.59:112,0,10	0/0:69,1:27:23.57:0,24,203	0/0:77,2:34:12.84:0,13,193	0/0:24,2:28:16.14:0,16,453	0/0:15,0:15:33.05:0,33,322	0/0:10,0:11:26.87:0,27,246	0/0:18,0:21:16.66:0,17,279	0/1:6,1:7:28.15:28,0,104	1/1:14,12:26:34.28:436,34,0	1/1:3,9:12:29.86:231,30,0	0/0:21,0:23:1.93:0,2,348	0/0:13,0:13:30.04:0,30,293	0/0:14,1:16:21.59:0,22,350	1/1:3,9:13:23.89:186,24,0	1/1:8,9:18:16.39:297,16,0	1/1:2,15:17:23.81:186,24,0	1/1:7,24:33:7.11:393,7,0	0/0:12,1:14:12.67:0,13,290	0/0:10,1:12:0.65:0,1,171	0/1:6,1:6:8.24:8,0,92	0/0:16,0:16:42.06:0,42,414	0/0:23,0:23:18.68:0,19,343	0/0:8,0:8:15.02:0,15,146	1/1:3,16:20:19.39:324,19,0	0/0:22,3:24:1.18:0,1,339	0/0:23,1:24:41.18:0,41,553	0/0:17,1:18:24.86:0,25,433
chr10	90566057	.	AT	A	1471.98	PASS	AB=0.850;AC=12;AF=0.214;AN=56;BaseQRankSum=6.991;DP=488;FS=7.355;HRun=11;HaplotypeScore=55.3628;InbreedingCoeff=0.6341;MQ=71.11;MQ0=3;MQRankSum=0.308;QD=11.78;ReadPosRankSum=0.339;VQSLOD=2.7233;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:28:44.51:0,45,670	0/0:10,0:10:21.05:0,21,224	0/0:17,0:11:20.93:0,21,182	0/1:14,1:12:23.83:36,0,24	0/0:28,0:28:57.14:0,57,601	0/0:18,0:18:48.10:0,48,498	0/0:9,0:12:29.57:0,30,266	0/0:36,1:37:56.54:0,57,795	0/0:12,0:12:33.03:0,33,323	1/1:7,13:20:35.90:295,36,0	1/1:3,14:17:41.92:345,42,0	0/0:13,0:13:30.08:0,30,320	0/0:13,1:15:17.30:0,17,373	0/0:14,0:16:26.81:0,27,243	0/0:20,0:20:51.09:0,51,531	1/1:0,26:26:71.92:591,72,0	0/0:18,0:19:38.92:0,39,392	0/1:5,3:8:0.26:62,0,0	0/0:17,0:17:33.08:0,33,351	0/0:13,1:15:20.30:0,20,405	0/1:9,1:10:24.96:25,0,168	0/0:18,0:18:36.08:0,36,377	0/0:14,0:14:37.34:0,37,387	0/0:15,1:16:20.46:0,20,412	1/1:5,9:14:32.94:270,33,0	0/0:19,0:19:48.12:0,48,512	0/0:19,0:19:45.11:0,45,480	0/1:12,2:13:22.18:22,0,197
chr10	90566906	.	AAAAAC	A	356.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.293;DP=614;FS=3.226;HRun=0;HaplotypeScore=108.5713;InbreedingCoeff=0.9352;MQ=70.47;MQ0=1;MQRankSum=-0.479;QD=16.95;ReadPosRankSum=0.054;VQSLOD=3.3451;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,12:21:11.03:441,11,0	0/0:12,0:12:24.08:0,24,697	0/0:20,0:18:24.08:0,24,633	0/0:19,0:16:23.86:0,24,613	0/0:24,0:24:51.16:0,51,1417	0/0:29,0:29:69.23:0,69,1935	0/0:11,0:11:21.07:0,21,610	0/0:30,0:30:66.22:0,66,1840	0/0:20,0:20:54.17:0,54,1464	0/0:22,0:22:60.21:0,60,1672	0/0:18,0:18:48.16:0,48,1387	0/0:22,0:22:48.16:0,48,1352	0/0:23,0:23:45.15:0,45,1302	0/0:19,0:19:48.15:0,48,1332	0/0:31,0:31:84.29:0,84,2429	0/0:21,0:21:51.18:0,51,1468	0/0:24,0:24:63.15:0,63,1598	0/0:19,0:19:40.95:0,41,1071	0/0:23,0:23:48.16:0,48,1316	0/0:27,0:27:60.21:0,60,1691	0/0:19,0:19:45.15:0,45,1292	0/0:14,0:14:39.13:0,39,1128	0/0:29,0:29:72.25:0,72,2062	0/0:14,0:14:36.12:0,36,998	0/0:25,0:25:57.20:0,57,1657	0/0:43,0:43:99:0,99,2861	0/0:28,0:28:75.26:0,75,2116	0/0:7,0:7:15.05:0,15,436
chr10	90567353	.	AAAAAAGAAGAAGAAGAAGAAGAAG	A	5223.55	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-9.225;DP=566;FS=6.504;HRun=0;HaplotypeScore=275.3577;InbreedingCoeff=-0.3670;MQ=47.97;MQ0=34;MQRankSum=4.235;QD=11.76;ReadPosRankSum=4.671;VQSLOD=2.7885;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:54.59:0,55,683	0/1:7,0:6:70.90:71,0,127	0/0:44,0:6:15:0,15,151	0/0:52,0:19:19.93:0,20,361	0/1:22,0:17:99:186,0,178	0/1:20,0:19:99:183,0,609	0/1:19,0:15:55.81:166,0,56	0/1:15,0:12:4.02:115,0,4	0/1:21,0:19:99:201,0,529	1/1:9,6:14:38.18:504,38,0	1/1:5,9:13:20.22:142,20,0	0/1:22,0:18:99:108,0,901	0/1:30,0:27:99:251,0,502	0/1:24,0:21:99:240,0,416	0/1:11,0:10:99:123,0,153	1/1:17,0:17:47.97:526,48,0	0/1:23,0:19:99:264,0,202	1/1:12,0:11:29.82:335,30,0	0/1:17,0:15:99:200,0,101	0/1:19,0:18:99:132,0,585	1/1:7,0:5:9.36:62,9,0	0/1:24,0:22:99:231,0,755	0/1:10,0:8:78.94:79,0,183	0/1:23,0:21:99:255,0,252	1/1:8,0:8:17.42:162,17,0	0/1:30,0:27:99:364,0,563	0/1:19,0:19:99:162,0,733	0/1:15,0:12:99:161,0,267
chr10	90567465	.	AAGCAGC	A	2805.68	PASS	AB=0.926;AC=35;AF=0.625;AN=56;BaseQRankSum=6.279;DP=484;FS=0.000;HRun=0;HaplotypeScore=89.8175;InbreedingCoeff=0.4400;MQ=33.31;MQ0=127;MQRankSum=-6.262;QD=8.06;ReadPosRankSum=0.617;VQSLOD=1.6317;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:11:18.06:0,18,297	1/1:9,0:8:4.19:82,4,0	0/0:28,0:6:7.26:0,7,188	0/0:25,0:12:29.82:0,30,467	1/1:10,0:4:6.02:78,6,0	1/1:19,1:9:12.04:182,12,0	0/1:15,0:11:8.33:34,0,8	1/1:8,0:2:2.98:22,3,0	1/1:9,2:9:12.03:203,12,0	0/0:9,0:6:15.04:0,15,250	0/0:4,0:4:7.27:0,7,105	1/1:11,7:7:12.04:235,12,0	0/1:20,13:21:11.81:539,0,12	1/1:16,8:13:9.13:139,9,0	0/1:21,0:16:19.17:19,0,163	0/0:20,0:20:41.96:0,42,533	0/1:33,0:24:67.47:67,0,209	0/0:16,0:12:36.03:0,36,516	1/1:8,5:3:5.99:63,6,0	1/1:12,0:10:9.03:120,9,0	1/1:23,0:18:20.45:195,20,0	1/1:13,1:5:3.01:67,3,0	1/1:6,0:3:4.56:45,5,0	1/1:25,2:15:14.94:131,15,0	0/0:8,0:7:14.94:0,15,228	0/1:19,2:15:58.69:267,0,59	1/1:17,6:19:21.84:460,22,0	1/1:7,0:4:3.01:48,3,0
chr10	90567471	.	C	CAGA	2590.46	PASS	AB=0.951;AC=35;AF=0.625;AN=56;BaseQRankSum=6.315;DP=419;FS=0.000;HRun=0;HaplotypeScore=82.9444;InbreedingCoeff=0.4756;MQ=41.26;MQ0=58;MQRankSum=-6.975;QD=9.22;ReadPosRankSum=0.154;VQSLOD=2.7948;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:13:24.05:0,24,347	1/1:8,0:7:4.79:30,5,0	0/0:29,0:9:23.59:0,24,278	0/0:28,0:15:38.64:0,39,483	1/1:2,8:8:14.93:131,15,0	1/1:13,2:10:12.04:244,12,0	1/1:6,5:12:3.01:36,3,0	1/1:7,0:5:11.77:77,12,0	1/1:12,1:11:9.04:125,9,0	0/0:9,0:8:20.93:0,21,295	0/0:4,0:4:6.02:0,6,99	1/1:10,1:7:12.03:187,12,0	1/1:21,3:19:30:343,30,0	0/1:16,1:12:7.09:44,0,7	0/1:17,0:15:19.92:20,0,85	0/0:23,0:23:47.66:0,48,596	0/1:27,0:22:41.12:41,0,144	0/0:15,0:13:33.03:0,33,502	1/1:13,0:3:5.99:84,6,0	1/1:1,9:9:9.03:168,9,0	1/1:22,0:20:32.53:323,33,0	1/1:7,0:3:3.01:31,3,0	1/1:1,2:3:3.01:58,3,0	1/1:21,1:14:17.93:194,18,0	0/0:6,0:5:15.03:0,15,225	0/1:16,1:14:38.01:254,0,38	0/1:16,3:17:17.10:306,0,17	1/1:4,0:4:8.97:91,9,0
chr10	90567477	.	AAGCAGC	A	973.37	PASS	AB=0.990;AC=15;AF=0.268;AN=56;BaseQRankSum=8.581;DP=398;FS=0.605;HRun=0;HaplotypeScore=93.1225;InbreedingCoeff=-0.0274;MQ=54.50;MQ0=30;MQRankSum=-7.927;QD=5.56;ReadPosRankSum=7.980;VQSLOD=0.0834;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:17:39.10:0,39,876	1/1:5,3:7:12.04:237,12,0	0/0:34,0:15:31.32:0,31,818	0/0:34,0:21:52.84:0,53,1285	0/0:11,0:10:9.89:0,10,137	0/1:9,0:9:7.17:7,0,144	0/0:12,0:11:3.70:0,4,84	0/0:7,0:6:13.19:0,13,113	0/1:10,0:9:44.84:45,0,117	0/0:12,0:11:27.04:0,27,669	0/0:3,0:3:6.02:0,6,168	0/1:9,0:8:26.33:74,0,26	1/1:19,0:17:10.71:200,11,0	0/1:13,0:12:44.65:45,0,63	0/1:19,0:17:54.03:54,0,113	0/0:25,0:25:45.15:0,45,1115	0/1:20,3:20:99:273,0,108	0/0:14,0:12:33.11:0,33,919	0/0:12,0:3:6.48:0,6,69	0/1:11,0:10:2.05:2,0,44	0/1:18,0:18:6.74:7,0,251	0/1:5,0:4:16.35:16,0,71	0/0:8,0:8:16.55:0,17,271	0/0:13,0:11:16.90:0,17,128	0/0:6,0:6:18.06:0,18,495	0/1:14,0:11:37.21:37,0,188	0/1:17,0:16:12.08:135,0,12	0/0:4,0:4:6.44:0,6,45
chr10	90567483	.	C	CAGCAGA	1021.53	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-1.482;DP=404;FS=0.000;HRun=0;HaplotypeScore=103.1087;InbreedingCoeff=0.8140;MQ=61.19;MQ0=22;MQRankSum=-2.734;QD=20.03;ReadPosRankSum=2.151;VQSLOD=2.6588;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:19:42.09:0,42,725	1/1:6,1:6:12.04:317,12,0	0/0:32,0:16:32.80:0,33,774	0/0:33,0:23:56.18:0,56,1042	0/0:13,0:12:20.84:0,21,205	0/0:10,0:10:26.58:0,27,253	0/0:11,0:11:6.02:0,6,88	0/0:12,0:11:23.90:0,24,205	0/0:8,0:8:23.90:0,24,278	0/0:14,0:13:33.09:0,33,579	0/0:2,0:2:6.02:0,6,116	0/0:9,0:8:11.96:0,12,140	0/0:22,0:20:28.99:0,29,328	0/0:14,0:13:15.49:0,15,175	1/1:8,11:19:6.02:188,6,0	0/0:24,0:24:41.84:0,42,832	1/1:19,4:21:24.07:647,24,0	0/0:13,0:11:30.10:0,30,629	0/0:17,0:8:17.91:0,18,153	0/0:12,0:11:11.52:0,12,95	0/0:17,0:17:34.97:0,35,351	0/0:5,0:4:10.81:0,11,89	0/0:8,0:8:18.06:0,18,278	0/0:12,0:11:19.39:0,19,145	0/0:7,0:7:21.06:0,21,406	0/0:11,0:10:22.10:0,22,271	0/0:15,0:14:27.20:0,27,273	0/0:5,0:5:9.42:0,9,68
chr10	90567708	.	TAA	T	5124.19	PASS	AB=0.522;AC=37;AF=0.661;AN=56;BaseQRankSum=-1.707;DP=402;FS=0.000;HRun=13;HaplotypeScore=60.2172;InbreedingCoeff=0.7324;MQ=56.78;MQ0=7;MQRankSum=-3.992;QD=17.43;ReadPosRankSum=0.677;VQSLOD=3.7292;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:75.24:0,75,1047	0/0:0,0:5:12.48:0,12,43	0/0:6,0:6:12:0,12,131	0/0:9,0:5:8.78:0,9,76	1/1:5,16:18:45.06:436,45,0	1/1:2,13:15:42.07:407,42,0	1/1:5,12:16:30.01:291,30,0	1/1:6,17:19:51.06:495,51,0	1/1:1,10:11:30.05:291,30,0	0/0:2,0:12:28.06:0,28,130	0/0:4,1:17:3.73:0,4,74	1/1:5,5:6:12.02:116,12,0	1/1:1,13:15:38.80:361,39,0	1/1:2,12:13:36.06:348,36,0	0/0:2,0:16:35.41:0,35,131	0/1:2,2:15:29.65:30,0,49	0/1:1,4:22:60.85:74,0,61	0/0:2,1:12:17.47:0,17,60	1/1:8,11:14:26.84:261,27,0	1/1:6,11:17:36.02:349,36,0	1/1:2,6:6:9.01:87,9,0	1/1:1,5:6:15.02:145,15,0	1/1:2,7:9:15.01:145,15,0	1/1:3,6:9:18.03:175,18,0	0/1:1,1:15:1.14:1,0,58	1/1:3,17:18:51.08:494,51,0	1/1:3,13:17:47.54:430,48,0	1/1:3,6:10:20.73:186,21,0
chr10	90567761	.	GA	G	5316.21	PASS	AB=0.980;AC=35;AF=0.625;AN=56;BaseQRankSum=0.303;DP=531;FS=17.027;HRun=9;HaplotypeScore=88.3814;InbreedingCoeff=0.8884;MQ=76.90;MQ0=2;MQRankSum=-3.715;QD=16.82;ReadPosRankSum=0.880;VQSLOD=3.7272;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:68.84:0,69,735	0/0:3,1:4:9.03:0,9,104	0/0:68,0:42:24.20:0,24,580	0/1:46,1:28:8.82:9,0,283	1/1:2,17:19:48.02:438,48,0	1/1:6,11:17:29.92:264,30,0	1/1:2,11:14:35.05:308,35,0	1/1:3,28:31:83.92:741,84,0	1/1:4,12:16:36.02:328,36,0	0/0:20,0:20:57.03:0,57,636	0/0:10,0:9:24.06:0,24,263	1/1:0,19:19:42.02:384,42,0	1/1:5,7:12:23.93:208,24,0	1/1:2,9:11:30.02:274,30,0	0/0:14,0:14:30.09:0,30,346	0/0:20,1:21:17.71:0,18,427	0/0:25,0:25:45.13:0,45,511	0/0:12,1:13:2.66:0,3,271	1/1:1,11:12:35.92:309,36,0	1/1:4,13:17:39.01:356,39,0	1/1:2,11:13:24:220,24,0	1/1:2,4:6:15.38:118,15,0	1/1:5,4:9:17.93:155,18,0	1/1:4,17:21:32.56:300,33,0	0/0:11,0:11:30.06:0,30,324	1/1:9,12:20:15.76:275,16,0	1/1:5,16:21:41.98:384,42,0	1/1:1,8:9:27.01:247,27,0
chr10	90567864	.	GAC	G	3603.44	PASS	AB=0.916;AC=36;AF=0.643;AN=56;BaseQRankSum=11.495;DP=449;FS=26.697;HRun=0;HaplotypeScore=130.0711;InbreedingCoeff=0.7977;MQ=68.74;MQ0=4;MQRankSum=-7.222;QD=13.91;ReadPosRankSum=2.251;VQSLOD=1.9173;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:45.05:0,45,647	0/0:5,0:5:9.03:0,9,152	0/0:35,0:24:54.13:0,54,778	0/0:35,1:25:18.54:0,19,801	1/1:3,9:12:18.05:214,18,0	1/1:3,8:11:12.01:115,12,0	1/1:8,3:11:6.89:64,7,0	1/1:8,16:24:45.08:516,45,0	1/1:1,8:9:18.02:179,18,0	0/0:12,0:12:33.11:0,33,557	0/1:9,1:10:11.52:12,0,350	1/1:12,16:25:41.64:409,42,0	1/1:5,8:13:18.01:162,18,0	1/1:6,9:15:28.16:243,28,0	0/1:11,1:12:5.51:6,0,443	0/0:17,0:17:45.15:0,45,744	0/0:21,0:21:57.18:0,57,917	0/0:20,0:20:48.15:0,48,762	1/1:6,6:12:27.01:254,27,0	1/1:1,7:8:15.02:156,15,0	1/1:18,13:30:17.37:178,17,0	1/1:1,3:4:2.47:36,2,0	1/1:3,4:7:12.04:145,12,0	1/1:10,12:22:18.01:185,18,0	0/0:11,0:11:24.03:0,24,373	1/1:5,9:14:35.98:362,36,0	1/1:4,6:10:18.05:201,18,0	1/1:0,6:6:15.04:166,15,0
chr10	90567877	.	GCACACA	G	2232.18	PASS	AB=0.801;AC=23;AF=0.411;AN=56;BaseQRankSum=10.780;DP=420;FS=1.632;HRun=0;HaplotypeScore=152.8777;InbreedingCoeff=-0.0465;MQ=53.77;MQ0=9;MQRankSum=-7.928;QD=9.26;ReadPosRankSum=4.657;VQSLOD=2.1612;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:18.74:216,0,19	0/0:4,0:4:9.03:0,9,158	0/0:29,0:17:39.21:0,39,516	0/0:36,0:22:59.23:0,59,939	0/1:6,4:10:9.72:63,0,10	1/1:5,4:9:12.03:155,12,0	0/1:7,1:8:18.08:49,0,18	0/1:21,0:22:15.58:16,0,143	0/1:4,4:8:12.28:153,0,12	0/0:13,0:13:39.13:0,39,944	0/0:13,0:13:30.06:0,30,511	0/1:17,8:22:66.32:313,0,66	1/1:3,6:9:3.33:246,3,0	0/1:5,6:11:12.21:241,0,12	0/0:13,0:13:39.11:0,39,1024	0/0:15,0:15:45.11:0,45,1181	0/0:27,0:27:75.17:0,75,1873	0/0:19,0:19:57.12:0,57,1513	0/1:10,4:13:40.86:196,0,41	1/1:4,4:7:6.78:150,7,0	0/1:27,2:25:18.26:61,0,18	1/1:3,1:4:3:26,3,0	1/1:3,3:6:1.58:106,2,0	0/1:14,3:17:16.40:80,0,16	0/0:10,0:10:21.04:0,21,599	0/1:9,4:13:62.23:141,0,62	0/1:4,3:7:16.56:114,0,17	0/1:4,2:6:10.95:80,0,11
chr10	90567891	.	GCACACACA	G	5273.44	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=12.571;DP=453;FS=0.000;HRun=0;HaplotypeScore=176.4649;InbreedingCoeff=0.8289;MQ=51.71;MQ0=8;MQRankSum=-9.375;QD=19.18;ReadPosRankSum=0.461;VQSLOD=3.5122;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:24.79:165,0,25	0/0:5,0:5:6.02:0,6,119	0/0:30,0:17:26.68:0,27,571	0/0:35,0:23:55.94:0,56,945	1/1:8,4:11:9.49:149,9,0	1/1:8,4:12:15.04:286,15,0	1/1:5,1:6:3.01:68,3,0	1/1:32,0:32:50.12:380,50,0	1/1:4,4:8:15.01:295,15,0	0/0:15,0:15:27.01:0,27,1048	0/0:9,0:9:18.03:0,18,537	1/1:16,8:23:54.01:767,54,0	1/1:6,6:12:23.12:460,23,0	1/1:7,6:13:21.06:446,21,0	0/0:12,0:12:33.10:0,33,1110	0/0:13,0:13:36.10:0,36,1185	0/0:26,0:26:75.20:0,75,2446	0/0:20,0:20:54.18:0,54,1940	1/1:2,13:13:38.48:463,38,0	1/1:5,4:8:15.02:282,15,0	1/1:29,2:28:11.86:176,12,0	1/1:4,1:5:3.01:51,3,0	1/1:1,3:4:12.04:209,12,0	1/1:21,3:24:14.89:205,15,0	0/0:12,0:12:27.09:0,27,943	1/1:9,4:13:34.75:394,35,0	1/1:7,3:10:23.57:280,24,0	1/1:5,2:7:14.87:197,15,0
chr10	90567897	.	ACACACACGCACACG	A	6540.62	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=11.817;DP=446;FS=1.666;HRun=0;HaplotypeScore=206.7342;InbreedingCoeff=0.7922;MQ=50.96;MQ0=8;MQRankSum=-9.547;QD=23.70;ReadPosRankSum=4.926;VQSLOD=3.6672;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,29:37:18.06:628,18,0	0/0:4,0:4:6.02:0,6,92	0/0:25,0:17:44.12:0,44,916	0/0:32,0:21:47.63:0,48,940	1/1:12,0:11:8.77:239,9,0	1/1:16,0:16:9.96:389,10,0	1/1:4,0:4:3.01:97,3,0	0/1:27,0:28:11.12:172,0,11	1/1:7,0:7:12.04:398,12,0	0/0:12,0:12:33.11:0,33,1477	0/0:11,0:11:20.87:0,21,805	1/1:25,0:24:39.53:871,40,0	1/1:14,0:14:12.67:589,13,0	1/1:14,0:14:20.99:610,21,0	0/0:11,0:11:30.06:0,30,1584	0/0:13,0:13:33.11:0,33,1784	0/0:27,0:27:75:0,75,3598	0/0:21,0:21:60.07:0,60,2933	1/1:15,0:13:15.98:424,16,0	1/1:9,0:8:15.02:403,15,0	1/1:32,0:29:8.26:175,8,0	1/1:5,0:5:3.01:76,3,0	1/1:4,0:4:12.04:339,12,0	1/1:22,0:22:5.84:196,6,0	0/0:13,0:13:27.09:0,27,1254	1/1:15,0:15:16.19:432,16,0	1/1:10,0:10:12.31:288,12,0	1/1:7,0:7:8.98:214,9,0
chr10	90569340	.	CA	C	19790.78	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-6.258;DP=725;FS=1.248;HRun=4;HaplotypeScore=99.9942;InbreedingCoeff=0.9990;MQ=83.31;MQ0=0;MQRankSum=-8.511;QD=32.55;ReadPosRankSum=2.767;VQSLOD=4.9962;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:99:1188,99,0	0/0:9,0:9:21.07:0,21,294	0/0:24,0:24:69.21:0,69,911	0/0:22,0:22:58.89:0,59,721	1/1:0,18:18:45.14:540,45,0	1/1:1,21:22:60.18:720,60,0	1/1:2,24:26:63.19:756,63,0	1/1:0,36:36:99:1283,108,0	1/1:0,26:26:72.22:864,72,0	1/1:2,29:31:87.27:1043,87,0	1/1:1,23:24:63.19:755,63,0	1/1:3,20:23:57.09:684,57,0	1/1:0,28:28:81.25:971,81,0	1/1:0,25:25:72.22:863,72,0	0/0:30,0:30:87.28:0,87,1197	1/1:3,36:39:99:1224,102,0	0/0:32,0:32:81.27:0,81,1134	1/1:0,16:16:45.14:540,45,0	1/1:1,20:21:60.14:694,60,0	1/1:0,21:21:54.16:648,54,0	1/1:1,35:36:93.29:1116,93,0	1/1:0,26:26:72.22:864,72,0	1/1:0,27:27:66.20:791,66,0	1/1:0,26:26:69.21:828,69,0	1/1:2,17:19:48.15:576,48,0	1/1:2,30:32:90.28:1080,90,0	1/1:0,34:34:99:1187,99,0	1/1:0,17:17:48.15:576,48,0
chr10	90569976	.	TC	T	576.06	PASS	AB=0.950;AC=3;AF=0.054;AN=56;BaseQRankSum=6.234;DP=517;FS=0.000;HRun=4;HaplotypeScore=64.7212;InbreedingCoeff=0.6331;MQ=56.58;MQ0=24;MQRankSum=-2.768;QD=9.00;ReadPosRankSum=1.518;VQSLOD=0.3909;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,20:26:21.24:668,21,0	0/0:3,0:3:6.02:0,6,84	0/1:35,1:5:2.37:2,0,70	0/0:36,1:4:6.01:0,6,58	0/0:25,0:25:72.23:0,72,989	0/0:15,0:13:36.12:0,36,503	0/0:21,0:18:45.11:0,45,608	0/0:29,0:28:81.25:0,81,1101	0/0:12,0:12:33.10:0,33,444	0/0:25,0:24:57.17:0,57,779	0/0:17,0:16:42.12:0,42,554	0/0:16,0:15:45.15:0,45,629	0/0:12,0:12:30.10:0,30,417	0/0:12,0:12:33.11:0,33,462	0/0:18,0:18:51.17:0,51,714	0/0:14,0:13:36.11:0,36,482	0/0:32,0:31:90.30:0,90,1253	0/0:19,0:19:45.13:0,45,611	0/0:18,0:16:45.11:0,45,592	0/0:16,0:16:42.14:0,42,586	0/0:18,0:17:39.07:0,39,498	0/0:17,0:17:39.13:0,39,543	0/0:16,0:15:39.12:0,39,528	0/0:13,0:13:36.12:0,36,501	0/0:15,0:14:33.11:0,33,462	0/0:8,0:8:21.07:0,21,294	0/0:14,0:14:42.14:0,42,580	0/0:11,0:10:27.09:0,27,378
chr10	90569986	.	C	CA	287.19	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.755;DP=487;FS=8.408;HRun=0;HaplotypeScore=73.7596;InbreedingCoeff=0.6492;MQ=60.13;MQ0=16;MQRankSum=-4.802;QD=8.45;ReadPosRankSum=0.503;VQSLOD=3.0708;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,21:34:3.83:365,4,0	0/0:3,0:3:8.99:0,9,104	0/0:22,0:6:9.58:0,10,91	0/0:23,0:4:9.01:0,9,89	0/0:24,0:25:60.12:0,60,751	0/0:14,0:13:30.10:0,30,401	0/0:19,0:16:42.13:0,42,542	0/0:31,0:30:84.16:0,84,1087	0/0:11,0:11:33.09:0,33,414	0/0:21,0:20:35.97:0,36,454	0/0:13,0:12:29.15:0,29,282	0/0:16,0:15:42.08:0,42,517	0/0:10,0:10:24.05:0,24,288	0/0:15,0:15:42.13:0,42,545	0/0:17,0:18:48.15:0,48,643	0/0:14,1:14:10.36:0,10,256	0/0:31,0:31:90.14:0,90,1142	0/0:20,0:20:43.13:0,43,347	0/0:21,0:20:53.83:0,54,656	0/0:13,0:14:38.85:0,39,468	0/0:9,0:9:24.04:0,24,276	0/0:13,0:13:30.10:0,30,392	0/0:18,0:17:39.06:0,39,491	0/0:12,0:12:30.09:0,30,391	0/0:13,0:13:23.16:0,23,214	0/0:15,0:16:32.71:0,33,378	0/0:14,0:15:42.13:0,42,533	0/0:10,0:10:27.09:0,27,360
chr10	90569988	.	GA	G	3163.46	PASS	AB=0.579;AC=33;AF=0.589;AN=56;BaseQRankSum=-3.988;DP=474;FS=8.528;HRun=12;HaplotypeScore=61.3092;InbreedingCoeff=0.8548;MQ=61.91;MQ0=14;MQRankSum=2.400;QD=11.89;ReadPosRankSum=1.729;VQSLOD=2.9264;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:63.64:0,64,387	0/0:3,0:3:9.02:0,9,91	0/0:20,1:7:6:0,6,52	0/0:20,0:4:8.96:0,9,76	1/1:5,20:25:42.98:327,43,0	1/1:3,11:13:23.91:186,24,0	1/1:6,11:14:2.43:202,2,0	1/1:12,19:30:17.93:374,18,0	1/1:4,6:10:17.92:139,18,0	0/0:13,0:17:26.16:0,26,174	0/0:6,0:17:28.33:0,28,159	1/1:6,9:14:23.88:185,24,0	1/1:4,5:10:10.69:64,11,0	1/1:6,9:15:23.89:186,24,0	0/0:18,0:18:36.07:0,36,365	0/0:6,0:15:34.24:0,34,181	0/0:26,2:28:19.65:0,20,556	0/0:3,0:16:31.40:0,31,166	1/1:7,16:21:50.51:378,51,0	1/1:4,10:14:26.69:200,27,0	1/1:1,6:7:14.94:116,15,0	1/1:4,8:12:20.39:161,20,0	1/1:8,11:18:17.04:138,17,0	1/1:3,8:11:20.92:163,21,0	0/0:6,0:12:14.33:0,14,77	1/1:6,10:17:4.98:192,5,0	1/1:6,9:15:26.82:209,27,0	0/1:3,8:11:3.53:159,0,4
chr10	90570339	.	C	CCT	8630.86	PASS	AB=0.969;AC=30;AF=0.536;AN=56;BaseQRankSum=13.152;DP=812;FS=23.853;HRun=0;HaplotypeScore=445.8622;InbreedingCoeff=-0.5845;MQ=76.65;MQ0=0;MQRankSum=-10.684;QD=11.46;ReadPosRankSum=6.167;VQSLOD=4.0524;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:42:99:547,0,150	1/1:4,0:4:6.02:67,6,0	0/0:29,0:29:74.20:0,74,1056	0/0:29,0:30:72.07:0,72,1274	0/1:34,0:34:99:248,0,120	0/1:34,0:34:6.45:482,0,6	0/1:27,0:27:53.57:412,0,54	0/1:40,3:44:99:311,0,1237	0/1:39,0:39:73.58:448,0,74	0/1:23,0:24:99:450,0,350	1/1:27,0:27:21.57:238,22,0	1/1:37,0:37:34.20:640,34,0	0/1:32,0:32:31.52:435,0,32	0/1:34,2:36:99:543,0,166	0/1:48,2:50:99:713,0,181	0/1:37,3:40:99:577,0,189	0/1:19,0:19:26.33:242,0,26	0/1:9,0:9:99:124,0,171	0/1:21,0:21:99:171,0,477	0/1:27,3:29:99:292,0,192	0/1:16,4:21:48.02:48,0,104	0/1:22,0:22:47.94:142,0,48	0/1:26,3:29:71.54:169,0,72	0/1:18,0:18:37.63:88,0,38	0/1:30,0:29:39.57:383,0,40	0/1:33,0:33:99:294,0,780	0/1:44,0:44:99:452,0,184	1/1:5,0:6:12:114,12,0
chr10	90570858	.	CA	C	2929.97	PASS	AB=0.623;AC=30;AF=0.536;AN=56;BaseQRankSum=5.041;DP=432;FS=0.440;HRun=12;HaplotypeScore=48.6437;InbreedingCoeff=0.7527;MQ=63.17;MQ0=21;MQRankSum=2.300;QD=13.56;ReadPosRankSum=0.980;VQSLOD=3.6947;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:83.71:0,84,818	0/0:8,0:7:15.03:0,15,152	0/0:20,0:9:10.33:0,10,100	0/0:20,0:8:9.35:0,9,80	1/1:3,11:14:26.87:209,27,0	0/1:3,13:16:0.56:179,0,1	1/1:5,5:9:14.93:116,15,0	1/1:7,21:26:59.75:464,60,0	0/1:4,9:13:3.55:159,0,4	0/0:18,0:17:30.35:0,30,317	0/0:14,0:12:6.96:0,7,251	0/1:7,6:13:3.62:151,0,4	1/1:4,3:8:13.97:96,14,0	0/1:5,5:10:2.77:81,0,3	0/0:13,0:12:26.79:0,27,268	0/0:12,1:13:6.69:0,7,202	0/0:36,1:30:51.76:0,52,681	0/0:23,0:20:39.08:0,39,396	1/1:10,7:14:26.76:201,27,0	1/1:4,10:14:32.85:254,33,0	1/1:2,2:3:8.95:68,9,0	1/1:0,6:6:14.92:116,15,0	1/1:0,8:8:23.91:186,24,0	1/1:5,11:15:20.92:163,21,0	0/0:12,0:13:20.20:0,20,238	1/1:2,12:14:35.85:279,36,0	1/1:5,12:15:35.86:278,36,0	1/1:2,6:6:17.93:139,18,0
chr10	90571045	.	TA	T	1170.80	PASS	AB=0.803;AC=12;AF=0.214;AN=56;BaseQRankSum=5.748;DP=427;FS=1.641;HRun=12;HaplotypeScore=42.6842;InbreedingCoeff=0.5862;MQ=65.07;MQ0=6;MQRankSum=-0.297;QD=11.15;ReadPosRankSum=2.400;VQSLOD=2.6927;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:20:34.22:0,34,177	0/0:6,0:6:15.03:0,15,152	0/0:26,0:9:9.10:0,9,86	0/0:20,0:11:17.50:0,17,144	0/0:20,0:22:49.99:0,50,519	0/0:13,0:13:39.08:0,39,396	0/0:13,0:13:35.99:0,36,344	0/0:44,2:45:60.15:0,60,927	0/0:3,0:3:9.02:0,9,91	1/1:2,14:16:43.04:323,43,0	1/1:2,18:20:19.64:340,20,0	0/1:6,1:7:14.22:14,0,52	0/1:8,1:9:2.21:2,0,154	0/0:11,0:11:27.05:0,27,274	0/0:11,0:11:21.04:0,21,213	1/1:2,16:18:41.83:325,42,0	0/0:21,2:21:4.65:0,5,393	1/1:2,9:11:20.92:163,21,0	0/0:26,1:27:20.11:0,20,547	0/1:9,2:11:14.22:14,0,186	0/0:3,0:3:6:0,6,56	0/0:9,0:9:23.88:0,24,227	0/0:8,0:8:18.02:0,18,176	0/0:10,0:10:20.96:0,21,191	0/1:4,9:13:3.56:159,0,4	0/0:25,0:25:68.44:0,68,657	0/0:8,0:8:24.05:0,24,243	0/0:16,1:17:24.84:0,25,420
chr10	90573224	.	GATTACC	G	1939.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.162;DP=849;FS=0.734;HRun=0;HaplotypeScore=170.4689;InbreedingCoeff=0.9976;MQ=81.77;MQ0=0;MQRankSum=-8.861;QD=38.78;ReadPosRankSum=-2.413;VQSLOD=2.7215;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,43:50:84.28:2034,84,0	0/0:12,0:12:33.11:0,33,1173	0/0:20,0:20:54.19:0,54,1853	0/0:29,0:29:75.24:0,75,2246	0/0:16,0:16:48.16:0,48,1745	0/0:22,0:22:63.22:0,63,2254	0/0:27,0:27:78.27:0,78,2768	0/0:30,0:30:90.31:0,90,3064	0/0:25,0:25:75.26:0,75,2737	0/0:35,0:35:99:0,102,3692	0/0:8,0:8:24.08:0,24,874	0/0:71,0:71:99:0,211,7492	0/0:41,0:41:99:0,123,4466	0/0:48,0:48:99:0,144,5150	0/0:54,0:54:99:0,160,5747	0/0:58,0:58:99:0,175,6221	0/0:31,0:30:93.32:0,93,3307	0/0:16,0:16:48.16:0,48,1756	0/0:19,0:19:57.20:0,57,2053	0/0:21,0:21:57.20:0,57,2079	0/0:56,0:56:99:0,166,5967	0/0:27,0:27:75.26:0,75,2617	0/0:14,0:14:39.13:0,39,1414	0/0:25,0:25:72.25:0,72,2598	0/0:20,0:20:60.21:0,60,2152	0/0:34,0:34:99:0,99,3465	0/0:27,0:27:78.27:0,78,2839	0/0:13,0:13:39.13:0,39,1424
chr10	90574344	.	GA	G	12564.72	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-11.208;DP=678;FS=11.626;HRun=10;HaplotypeScore=76.8632;InbreedingCoeff=0.8646;MQ=69.84;MQ0=1;MQRankSum=-2.494;QD=21.01;ReadPosRankSum=1.393;VQSLOD=5.1588;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,28:32:68.98:599,69,0	0/0:2,0:13:25.57:0,26,128	0/0:13,0:13:14.28:0,14,88	0/1:9,0:7:13.88:14,0,67	1/1:2,24:26:68.98:599,69,0	1/1:1,33:34:92.97:807,93,0	1/1:3,16:19:24.88:345,25,0	1/1:10,26:36:77.96:677,78,0	1/1:4,17:21:44.97:391,45,0	1/1:2,22:24:62.98:547,63,0	1/1:3,22:25:62.97:547,63,0	1/1:3,18:21:47.99:417,48,0	1/1:4,22:26:56.98:495,57,0	1/1:5,25:31:37.83:544,38,0	0/0:3,0:35:88.18:0,88,452	1/1:3,30:33:83.98:729,84,0	0/0:3,0:19:42.61:0,43,213	1/1:1,23:24:59.98:521,60,0	1/1:1,20:21:29.92:471,30,0	1/1:4,30:34:89.97:781,90,0	1/1:4,22:26:23.81:436,24,0	1/1:0,15:15:41.99:365,42,0	1/1:2,22:24:65.99:573,66,0	1/1:1,31:32:89.98:781,90,0	1/1:2,10:12:29.99:260,30,0	1/1:1,23:24:68.98:599,69,0	1/1:3,39:42:99:912,105,0	1/1:1,6:7:17.99:156,18,0
chr10	90575114	.	G	GA	2365.26	PASS	AB=0.745;AC=32;AF=0.593;AN=54;BaseQRankSum=-6.109;DP=552;FS=0.000;HRun=15;HaplotypeScore=77.2089;InbreedingCoeff=0.2961;MQ=58.04;MQ0=8;MQRankSum=3.383;QD=5.78;ReadPosRankSum=-4.770;VQSLOD=1.2740;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:29:26.31:0,26,76	1/1:7,0:10:2.84:14,3,0	./.	0/1:8,0:3:0:0,0,0	1/1:17,6:24:10.07:189,10,0	0/1:8,11:20:15.88:125,0,16	1/1:7,10:17:8.99:76,9,0	0/1:13,12:25:19.77:182,0,20	0/1:6,5:11:3.03:86,0,3	0/0:10,0:23:25.54:0,26,76	0/0:8,0:20:16.17:0,16,47	0/1:15,10:26:15.55:87,0,16	1/1:7,18:25:11.95:209,12,0	0/1:15,3:17:32.18:79,0,32	1/1:9,0:24:8.72:101,9,0	0/0:7,0:22:26.42:0,26,76	1/1:11,2:29:31.62:180,32,0	0/0:3,0:19:26.46:0,26,75	0/1:11,7:18:1.81:83,0,2	1/1:10,14:24:12.74:193,13,0	1/1:7,9:18:1.77:129,2,0	0/1:6,4:9:0.05:104,0,0	1/1:6,6:12:8.72:75,9,0	1/1:5,14:19:23.77:222,24,0	0/0:4,0:22:30.21:0,30,86	1/1:10,9:20:15.67:171,16,0	0/1:13,12:27:4.67:120,0,5	0/1:14,6:19:27.21:114,0,27
chr10	90575648	.	TA	T	1170.45	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=3.831;DP=365;FS=0.576;HRun=8;HaplotypeScore=41.8386;InbreedingCoeff=0.8793;MQ=71.45;MQ0=2;MQRankSum=1.032;QD=18.58;ReadPosRankSum=3.395;VQSLOD=3.1979;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:54.15:0,54,641	0/0:7,0:7:21.06:0,21,253	0/0:16,0:11:12.80:0,13,152	0/0:17,0:13:16.46:0,16,167	0/0:16,0:16:45.10:0,45,507	0/0:12,0:12:33.10:0,33,399	0/0:6,0:6:11.99:0,12,129	0/0:36,0:35:99:0,99,1170	0/0:11,0:11:30.08:0,30,350	1/1:0,8:7:21.03:203,21,0	1/1:2,9:11:21.03:203,21,0	0/0:5,0:5:6.02:0,6,73	0/0:8,0:8:21.06:0,21,254	0/0:7,0:7:15.04:0,15,171	0/0:11,0:11:27.07:0,27,315	1/1:1,7:8:15.02:145,15,0	0/0:27,0:27:69.05:0,69,762	1/1:3,16:18:22.49:357,22,0	0/0:25,0:23:63.17:0,63,733	0/0:8,0:8:18.04:0,18,206	0/0:4,0:4:9.03:0,9,109	0/0:3,0:3:9.03:0,9,109	0/0:2,0:2:3.01:0,3,36	0/0:6,0:6:12.04:0,12,145	1/1:1,16:17:45.07:434,45,0	0/0:26,0:26:69.19:0,69,815	0/0:14,0:13:33.07:0,33,368	0/0:13,0:13:30.09:0,30,362
chr10	90575768	.	G	GA	8119.89	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-7.020;DP=419;FS=17.669;HRun=0;HaplotypeScore=62.6510;InbreedingCoeff=0.9352;MQ=67.75;MQ0=3;MQRankSum=-0.609;QD=33.42;ReadPosRankSum=-0.830;VQSLOD=3.1111;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,2:34:6.48:0,6,304	0/0:3,0:3:9.03:0,9,125	0/0:13,0:6:14.30:0,14,132	0/0:14,0:9:6.04:0,6,124	1/1:12,13:25:66.19:975,66,0	1/1:1,18:19:27.09:431,27,0	1/1:3,19:22:42:585,42,0	1/1:5,25:30:69.16:964,69,0	1/1:2,3:5:12.02:150,12,0	0/0:6,0:7:11.44:0,11,60	0/0:17,0:19:40.26:0,40,211	1/1:0,12:12:24.08:384,24,0	1/1:1,5:6:8.83:142,9,0	1/1:1,11:12:24.08:383,24,0	0/0:13,0:13:36.03:0,36,476	0/0:12,0:12:23.47:0,23,126	0/0:26,0:26:69.20:0,69,917	0/0:17,0:17:35.90:0,36,191	1/1:1,17:18:51.17:782,51,0	1/1:0,11:11:27.08:375,27,0	1/1:1,6:7:15.05:220,15,0	1/1:1,9:10:21.07:334,21,0	1/1:0,11:11:27.09:417,27,0	1/1:0,6:6:15.05:238,15,0	0/0:16,0:16:28.71:0,29,124	1/1:0,17:17:51.15:757,51,0	1/1:9,10:18:39.10:530,39,0	1/1:8,5:13:33.09:454,33,0
chr10	90576143	.	AG	A	2211.59	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.188;DP=552;FS=0.436;HRun=8;HaplotypeScore=66.7824;InbreedingCoeff=0.9463;MQ=83.63;MQ0=0;MQRankSum=-2.832;QD=23.78;ReadPosRankSum=1.051;VQSLOD=4.3477;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:66.17:0,66,772	0/0:1,0:9:25.94:0,26,135	0/0:23,0:23:43.64:0,44,555	0/0:23,0:22:22.15:0,22,375	0/0:26,0:26:68.70:0,69,806	0/0:16,0:16:48.15:0,48,578	0/0:26,0:25:63.18:0,63,749	0/0:22,0:22:59.91:0,60,665	0/0:19,0:19:48.15:0,48,580	1/1:3,18:21:54.08:521,54,0	1/1:4,13:17:45.02:424,45,0	0/0:28,0:28:71.96:0,72,845	0/0:14,0:14:36.07:0,36,418	0/0:14,0:14:33.04:0,33,360	0/0:3,0:22:51.91:0,52,286	1/1:3,23:25:69.10:663,69,0	0/0:9,0:29:58.24:0,58,337	1/1:2,14:16:42.07:406,42,0	0/0:13,1:14:7.13:0,7,368	0/0:16,0:16:48.11:0,48,563	0/0:17,0:17:35.95:0,36,434	0/0:11,1:12:4.12:0,4,333	0/0:13,0:13:39.11:0,39,460	0/0:25,0:25:63.15:0,63,744	1/1:3,10:13:39.06:373,39,0	0/0:20,1:21:25.18:0,25,586	0/0:29,0:29:84.25:0,84,1003	0/0:10,0:10:27.08:0,27,326
chr10	90576151	.	GT	G	579.42	PASS	AB=0.885;AC=8;AF=0.143;AN=56;BaseQRankSum=9.325;DP=529;FS=6.856;HRun=1;HaplotypeScore=70.9271;InbreedingCoeff=0.7762;MQ=85.27;MQ0=0;MQRankSum=-4.091;QD=6.30;ReadPosRankSum=2.283;VQSLOD=0.6232;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:71.99:0,72,862	0/0:10,0:10:29.30:0,29,183	0/0:23,0:23:20.42:0,20,701	0/0:22,0:21:25.12:0,25,574	0/0:24,0:24:53.94:0,54,811	0/0:17,0:17:51.10:0,51,609	0/0:26,0:26:68.86:0,69,821	0/0:25,0:25:75.17:0,75,922	0/0:18,0:18:40.19:0,40,611	1/1:18,0:18:21.11:114,21,0	0/1:15,4:19:3.90:163,0,4	0/0:26,0:26:72.19:0,72,918	0/0:13,0:13:36.09:0,36,465	0/0:12,0:12:35.70:0,36,439	0/0:20,0:20:44.72:0,45,273	1/1:24,0:24:29.76:199,30,0	0/0:23,0:23:61.51:0,62,393	0/1:16,1:17:5:93,0,5	0/0:17,0:17:46.36:0,46,585	0/0:18,0:18:53.90:0,54,608	0/0:14,0:14:39.07:0,39,511	0/0:11,0:11:26.92:0,27,382	0/0:13,0:13:39.12:0,39,514	0/0:23,0:23:63.11:0,63,842	1/1:12,2:14:9.27:161,9,0	0/0:18,0:18:50.60:0,51,642	0/0:29,0:29:84.16:0,84,1079	0/0:9,0:9:27.09:0,27,376
chr10	90576742	.	AACACACACACACACACACAC	A	4374.42	PASS	AB=1.000;AC=27;AF=0.519;AN=52;BaseQRankSum=4.706;DP=413;FS=0.799;HRun=0;HaplotypeScore=197.9970;InbreedingCoeff=0.5447;MQ=63.11;MQ0=10;MQRankSum=-3.221;QD=19.62;ReadPosRankSum=0.711;VQSLOD=3.9003;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:36.12:0,36,2836	0/0:2,0:4:3.01:0,3,101	./.	0/1:28,0:19:5.24:5,0,97	1/1:12,6:18:11.15:635,11,0	1/1:10,5:15:17.65:867,18,0	1/1:18,0:17:3:26,3,0	0/0:23,0:23:2.60:0,3,10	1/1:3,2:5:3.01:159,3,0	0/0:12,0:12:18.06:0,18,1325	0/0:11,0:10:12.04:0,12,929	1/1:14,2:16:7.27:321,7,0	1/1:11,6:18:9.03:458,9,0	0/1:9,0:9:99:103,0,129	0/0:18,0:19:24.08:0,24,969	0/0:11,0:11:12.04:0,12,668	0/0:18,0:19:19.88:0,20,713	0/0:17,0:16:31.30:0,31,1171	0/0:15,0:13:1.23:0,1,3	1/1:10,3:14:12:438,12,0	1/1:32,0:30:6.01:78,6,0	1/1:7,0:7:6:51,6,0	1/1:4,2:6:6.02:318,6,0	1/1:7,6:13:5.99:318,6,0	0/0:13,0:15:30.10:0,30,2143	0/1:12,0:12:99:121,0,181	1/1:9,3:12:9.03:477,9,0	./.
chr10	90576952	.	C	CTTGTT	2125.95	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-5.140;DP=645;FS=4.599;HRun=0;HaplotypeScore=111.5809;InbreedingCoeff=0.8242;MQ=63.27;MQ0=1;MQRankSum=-2.585;QD=25.01;ReadPosRankSum=0.028;VQSLOD=3.0319;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:51.21:0,51,910	1/1:3,5:8:12.04:344,12,0	0/0:21,0:15:22.57:0,23,330	0/1:26,0:19:32.83:33,0,377	0/0:33,0:33:59.72:0,60,1079	0/0:25,0:25:57.20:0,57,1057	0/0:14,0:14:27.09:0,27,488	0/0:26,0:26:45.13:0,45,736	0/0:17,0:17:45.15:0,45,842	0/0:37,0:37:75.20:0,75,1269	0/0:15,0:15:39.13:0,39,729	0/0:28,0:28:72.25:0,72,1324	0/0:23,0:23:48.16:0,48,879	0/0:17,0:17:28.10:0,28,680	1/1:2,19:22:27.09:775,27,0	0/0:23,0:23:57.20:0,57,1058	1/1:7,20:28:39.13:1120,39,0	0/0:16,0:16:36.11:0,36,607	0/0:26,0:26:45.15:0,45,811	0/0:37,0:37:84.27:0,84,1521	0/0:24,0:24:48.14:0,48,864	0/0:21,0:21:45.14:0,45,782	0/0:29,0:29:57.18:0,57,1014	0/0:15,0:15:36.12:0,36,652	0/0:22,0:22:45.13:0,45,800	0/0:30,0:30:51.17:0,51,945	0/0:21,0:21:48.15:0,48,853	0/0:16,0:16:42.09:0,42,670
chr10	90577071	.	GCC	G	6599.64	PASS	AB=0.733;AC=39;AF=0.696;AN=56;BaseQRankSum=-9.134;DP=511;FS=7.699;HRun=12;HaplotypeScore=77.6758;InbreedingCoeff=0.6561;MQ=70.98;MQ0=3;MQRankSum=-0.227;QD=17.01;ReadPosRankSum=2.306;VQSLOD=3.6921;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:9.48:0,9,112	1/1:1,1:2:2.99:30,3,0	0/0:23,0:20:35.63:0,36,360	0/1:20,0:14:8.19:8,0,123	1/1:7,14:22:47.78:458,48,0	1/1:5,21:25:51.07:518,51,0	1/1:4,21:26:34.82:536,35,0	1/1:13,7:20:14.94:152,15,0	1/1:1,14:15:33.07:336,33,0	0/1:7,1:14:11.56:12,0,62	0/0:7,0:18:7.45:0,7,49	1/1:2,19:21:47.84:470,48,0	1/1:4,11:15:27.02:275,27,0	1/1:6,9:15:29.74:287,30,0	0/0:11,1:26:20.09:0,20,168	0/1:2,2:16:27.69:28,0,63	0/0:7,1:21:10.59:0,11,168	0/0:1,0:4:4.99:0,5,18	1/1:4,14:18:42.07:427,42,0	1/1:6,20:29:47.22:493,47,0	1/1:4,19:23:47.80:470,48,0	1/1:3,13:17:38.82:378,39,0	1/1:4,8:13:20.75:195,21,0	1/1:1,20:22:59.87:592,60,0	0/0:7,0:14:18.05:0,18,101	1/1:6,17:23:48.04:479,48,0	1/1:6,19:24:41.68:427,42,0	1/1:2,1:3:2.98:30,3,0
chr10	90577958	.	TTATA	T	1037.47	PASS	AB=0.625;AC=9;AF=0.173;AN=52;BaseQRankSum=5.386;DP=190;FS=0.835;HRun=0;HaplotypeScore=33.9225;InbreedingCoeff=0.4612;MQ=74.43;MQ0=0;MQRankSum=-2.396;QD=25.30;ReadPosRankSum=3.045;VQSLOD=3.2765;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:0,0:4:10.98:0,11,50	0/0:1,0:1:3.01:0,3,75	./.	0/0:9,0:5:3.47:0,3,28	0/0:8,0:8:15.04:0,15,307	0/0:7,0:7:18.04:0,18,394	0/0:2,0:2:3.01:0,3,75	0/0:32,1:37:23.62:0,24,1297	0/0:5,0:5:9.03:0,9,224	1/1:2,2:4:9.01:124,9,0	1/1:1,4:5:9.03:152,9,0	0/0:6,0:6:3.01:0,3,75	0/0:1,0:1:3.01:0,3,75	./.	0/0:5,0:5:9.03:0,9,224	1/1:2,5:7:9.03:152,9,0	0/0:19,0:21:53.92:0,54,1233	1/1:7,12:20:42.13:664,42,0	0/0:5,0:5:9.03:0,9,224	0/0:5,0:5:6.02:0,6,149	0/0:3,0:3:3.01:0,3,75	0/0:5,0:5:6:0,6,99	0/0:2,0:2:3.01:0,3,75	0/0:2,0:2:3.01:0,3,75	0/1:2,2:5:25.65:88,0,26	0/0:8,0:9:21.02:0,21,386	0/0:5,0:5:12.04:0,12,298	0/0:2,0:2:6.02:0,6,144
chr10	90578521	.	C	CA	5150.76	PASS	AB=0.929;AC=11;AF=0.196;AN=56;BaseQRankSum=-13.692;DP=663;FS=0.384;HRun=0;HaplotypeScore=83.9302;InbreedingCoeff=0.8876;MQ=88.67;MQ0=0;MQRankSum=-3.812;QD=37.60;ReadPosRankSum=1.967;VQSLOD=4.9593;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:64:99:0,184,2553	0/0:9,0:9:27.09:0,27,374	0/0:19,0:19:54.18:0,54,751	0/0:27,0:28:71.58:0,72,915	0/0:22,0:22:63.21:0,63,875	0/0:25,0:25:72.24:0,72,1006	0/0:26,0:26:78.24:0,78,1072	0/0:30,0:30:79.81:0,80,1080	0/0:17,0:17:45.15:0,45,628	1/1:0,22:22:66.23:1056,66,0	1/1:0,20:20:54.18:863,54,0	0/0:20,0:20:60.20:0,60,837	0/0:25,0:25:72.24:0,72,1004	0/0:28,0:28:84.28:0,84,1170	0/0:32,0:32:96.29:0,96,1308	1/1:0,26:26:75.26:1199,75,0	0/0:23,0:23:66.22:0,66,922	1/1:0,16:16:48.16:767,48,0	0/0:17,0:17:51.16:0,51,696	0/0:24,0:24:66.18:0,66,898	0/0:27,0:27:78.26:0,78,1090	0/0:20,0:20:60.16:0,60,809	0/0:17,0:17:45.15:0,45,627	0/0:25,0:25:72.24:0,72,1003	1/1:0,27:27:78.27:1247,78,0	0/1:24,2:26:17.64:18,0,928	0/0:21,0:21:57.19:0,57,793	0/0:7,0:7:21.07:0,21,293
chr10	90579806	.	CA	C	1879.05	PASS	AB=0.944;AC=11;AF=0.196;AN=56;BaseQRankSum=8.236;DP=566;FS=2.110;HRun=10;HaplotypeScore=56.3568;InbreedingCoeff=0.8707;MQ=69.85;MQ0=1;MQRankSum=0.829;QD=15.92;ReadPosRankSum=2.562;VQSLOD=4.1862;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.24:0,87,962	0/0:3,0:3:9.01:0,9,91	0/0:22,0:14:11.86:0,12,116	0/1:16,1:11:16.41:16,0,23	0/0:25,0:25:60.12:0,60,639	0/0:19,0:19:51.09:0,51,544	0/0:14,0:14:36.10:0,36,398	0/0:38,0:38:93.20:0,93,988	0/0:15,0:15:30.07:0,30,323	1/1:4,17:21:50.98:443,51,0	1/1:2,20:22:59.98:521,60,0	0/0:17,0:17:42.07:0,42,437	0/0:25,0:25:66.12:0,66,701	0/0:13,0:13:36.07:0,36,382	0/0:34,1:35:64.15:0,64,902	1/1:6,24:30:52.67:557,53,0	0/0:19,0:19:51:0,51,526	1/1:0,11:11:26.99:234,27,0	0/0:29,0:29:72.10:0,72,743	0/0:21,0:21:57.13:0,57,614	0/0:11,0:11:30.06:0,30,322	0/0:13,0:13:39.08:0,39,415	0/0:12,0:12:27.06:0,27,291	0/0:13,0:13:36.09:0,36,390	1/1:3,14:17:32.98:286,33,0	0/0:31,0:31:72.16:0,72,776	0/0:28,0:27:75.13:0,75,786	0/0:12,0:12:27.07:0,27,299
chr10	90580584	.	A	AG	5851.10	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=4.754;DP=723;FS=2.304;HRun=1;HaplotypeScore=206.6618;InbreedingCoeff=0.6312;MQ=76.38;MQ0=0;MQRankSum=-2.776;QD=8.35;ReadPosRankSum=3.388;VQSLOD=2.6358;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:48,0:48:98.86:389,99,0	1/1:9,0:9:12.33:84,12,0	0/0:22,0:22:52.65:0,53,393	0/1:17,0:18:42.38:42,0,218	1/1:38,0:38:41.87:239,42,0	1/1:19,0:19:36.87:132,37,0	1/1:20,0:20:28.78:119,29,0	1/1:22,0:22:36.20:242,36,0	1/1:15,1:16:33.81:154,34,0	1/1:29,0:29:63.63:337,64,0	1/1:21,0:21:46.45:158,46,0	1/1:38,0:38:81.92:306,82,0	1/1:27,0:27:27.06:153,27,0	1/1:33,0:33:75.36:300,75,0	1/1:38,0:38:79.85:329,80,0	1/1:41,0:41:95.78:367,96,0	1/1:24,0:24:54.45:214,54,0	1/1:22,0:22:43.35:170,43,0	1/1:20,0:20:26.32:166,26,0	1/1:36,0:36:76.36:350,76,0	1/1:28,0:28:62.10:295,62,0	1/1:20,0:21:39.84:154,40,0	1/1:13,0:13:22.64:75,23,0	1/1:22,1:23:56.14:239,56,0	1/1:30,0:30:56.01:254,56,0	1/1:26,0:26:58.07:273,58,0	1/1:28,0:27:42.33:154,42,0	1/1:11,2:13:25.67:157,26,0
chr10	90582942	.	GT	G	22647.88	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.659;DP=726;FS=2.600;HRun=3;HaplotypeScore=74.9398;InbreedingCoeff=0.9994;MQ=88.57;MQ0=0;MQRankSum=-11.658;QD=33.60;ReadPosRankSum=6.265;VQSLOD=4.9638;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,54:54:99:1821,147,0	1/1:1,9:10:27.04:317,27,0	0/0:25,0:25:75.23:0,75,1042	0/0:27,0:27:72.11:0,72,918	1/1:1,21:22:63.20:780,63,0	1/1:1,32:33:90.28:1116,90,0	1/1:0,21:21:60.19:744,60,0	1/1:3,35:38:99:1223,102,0	1/1:0,21:21:63.20:781,63,0	1/1:1,24:25:72.21:880,72,0	1/1:0,23:23:57.18:706,57,0	1/1:2,22:24:54.17:669,54,0	1/1:0,29:29:84.24:1041,84,0	1/1:1,22:23:63.20:781,63,0	1/1:0,35:35:93.29:1152,93,0	1/1:1,27:28:72.23:892,72,0	1/1:0,27:27:78.25:967,78,0	1/1:2,17:19:51.16:632,51,0	1/1:3,20:23:60.17:729,60,0	1/1:0,24:24:60.19:743,60,0	1/1:0,31:31:93.29:1152,93,0	1/1:0,19:19:54.17:669,54,0	1/1:0,20:20:51.12:615,51,0	1/1:1,40:41:99:1376,111,0	1/1:0,17:17:45.14:558,45,0	1/1:1,19:20:57.18:707,57,0	1/1:0,34:34:93.27:1152,93,0	1/1:0,13:13:36.11:446,36,0
chr10	90583195	.	AGAT	A	689.85	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.233;DP=648;FS=0.972;HRun=0;HaplotypeScore=90.5090;InbreedingCoeff=0.9917;MQ=74.17;MQ0=0;MQRankSum=-2.897;QD=36.31;ReadPosRankSum=1.837;VQSLOD=4.5261;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:48.16:785,48,0	0/0:11,0:11:33.10:0,33,680	0/0:19,0:19:52.06:0,52,1121	0/0:18,0:18:48.16:0,48,1018	0/0:29,0:29:87.30:0,87,1949	0/0:35,0:35:99:0,99,2195	0/0:23,0:23:66.21:0,66,1440	0/0:28,0:28:78.27:0,78,1732	0/0:16,0:16:45.15:0,45,995	0/0:23,0:23:69.24:0,69,1532	0/0:26,0:26:78.23:0,78,1693	0/0:20,0:20:57.18:0,57,1220	0/0:24,0:24:72.22:0,72,1564	0/0:15,0:15:42.13:0,42,889	0/0:29,0:29:84.27:0,84,1784	0/0:28,0:28:84.28:0,84,1819	0/0:31,0:31:87.30:0,87,1971	0/0:18,0:18:54.16:0,54,1172	0/0:27,0:27:78.26:0,78,1720	0/0:25,0:25:66.23:0,66,1450	0/0:21,0:21:57.20:0,57,1245	0/0:18,0:18:51.18:0,51,1156	0/0:19,0:19:54.19:0,54,1204	0/0:9,0:9:18.06:0,18,385	0/0:32,0:32:90.31:0,90,2022	0/0:34,0:34:99:0,99,2244	0/0:38,0:38:99:0,105,2357	0/0:13,0:13:39.13:0,39,884
chr10	90583354	.	T	TCCC	15009.19	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.946;DP=285;FS=12.600;HRun=1;HaplotypeScore=217.5397;InbreedingCoeff=0.8166;MQ=51.79;MQ0=2;MQRankSum=-5.030;QD=57.51;ReadPosRankSum=2.356;VQSLOD=2.9297;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:10.94:548,11,0	1/1:5,0:5:15.05:320,15,0	0/0:12,0:10:27.08:0,27,409	0/0:10,0:7:18.06:0,18,297	1/1:10,0:10:18.06:420,18,0	1/1:8,0:8:21.07:492,21,0	1/1:13,0:12:24.08:562,24,0	1/1:11,0:11:27.09:598,27,0	1/1:10,0:10:30.10:697,30,0	1/1:11,0:11:30.10:692,30,0	1/1:7,0:7:15.01:294,15,0	1/1:5,0:5:15.04:305,15,0	1/1:9,0:9:27.09:634,27,0	1/1:12,0:12:36.12:803,36,0	1/1:19,0:19:51.59:1045,52,0	1/1:9,0:9:27.09:635,27,0	1/1:8,0:8:13.86:342,14,0	1/1:7,0:7:18.50:345,18,0	1/1:6,0:5:11.90:281,12,0	1/1:15,0:15:39.13:894,39,0	1/1:3,0:3:3.89:135,4,0	1/1:9,0:9:27.09:630,27,0	1/1:14,3:17:42.14:967,42,0	0/0:2,0:2:2.74:0,3,12	1/1:16,0:16:45.15:980,45,0	1/1:14,0:14:41.50:892,42,0	1/1:17,3:20:54.19:1264,54,0	1/1:4,0:4:12.02:235,12,0
chr10	90583747	.	T	TGAA	6057.99	PASS	AB=0.875;AC=13;AF=0.232;AN=56;BaseQRankSum=-9.490;DP=636;FS=5.751;HRun=0;HaplotypeScore=89.3141;InbreedingCoeff=0.8799;MQ=82.56;MQ0=0;MQRankSum=-3.980;QD=41.49;ReadPosRankSum=0.538;VQSLOD=6.2192;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,22:28:54:980,54,0	0/1:6,1:7:4.93:5,0,149	0/0:25,0:25:48.15:0,48,714	0/0:24,0:21:39.13:0,39,584	0/0:22,0:22:38.90:0,39,580	0/0:29,0:29:66.22:0,66,1010	0/0:36,0:36:90.29:0,90,1359	0/0:28,0:28:60.19:0,60,871	0/0:14,0:14:33.11:0,33,510	1/1:2,20:23:54.12:1001,54,0	1/1:3,12:15:30.10:642,30,0	0/0:24,0:24:63.21:0,63,975	0/0:22,0:22:54.17:0,54,804	0/0:27,0:27:66.18:0,66,993	0/0:17,0:17:39.13:0,39,601	1/1:6,23:29:66.23:1415,66,0	0/0:31,0:31:84.29:0,84,1295	1/1:4,24:27:60.21:1288,60,0	0/0:20,0:20:42.14:0,42,650	0/0:15,0:15:42.14:0,42,649	0/0:48,0:48:99:0,129,1928	0/0:14,0:14:33.11:0,33,499	0/0:17,0:17:36.11:0,36,535	0/0:17,0:17:45.15:0,45,684	1/1:3,13:16:36.08:727,36,0	0/0:25,1:26:4.74:0,5,890	0/0:32,0:32:90.27:0,90,1329	0/0:2,0:2:6:0,6,70
chr10	90584004	.	A	AT	476.96	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.903;DP=548;FS=1.771;HRun=9;HaplotypeScore=52.7780;InbreedingCoeff=0.8170;MQ=78.44;MQ0=1;MQRankSum=-0.167;QD=19.08;ReadPosRankSum=-0.029;VQSLOD=3.6728;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:31.12:571,31,0	0/0:11,0:11:29.98:0,30,257	0/0:19,0:18:14.88:0,15,279	0/0:19,0:17:26.02:0,26,220	0/0:21,0:21:56.96:0,57,489	0/0:28,0:28:71.98:0,72,625	0/0:22,0:22:56.98:0,57,495	0/0:30,0:30:74.97:0,75,646	0/0:14,0:14:38.99:0,39,339	0/0:25,0:25:59.90:0,60,509	0/0:26,0:26:53.97:0,54,469	0/0:18,0:18:50.97:0,51,439	0/0:16,0:15:32.97:0,33,286	0/0:12,0:12:29.99:0,30,260	0/0:23,0:23:59.98:0,60,521	0/0:14,0:14:38.91:0,39,327	0/0:17,0:17:44.97:0,45,386	0/0:10,0:10:26.99:0,27,234	0/0:21,0:21:53.99:0,54,469	0/0:26,0:27:65.01:0,65,553	0/0:9,0:9:20.98:0,21,182	0/0:20,0:20:44.96:0,45,387	0/0:24,1:25:22.23:0,22,493	0/0:17,0:17:41.99:0,42,365	0/0:22,0:22:65.99:0,66,573	0/0:20,0:20:56.99:0,57,495	0/0:27,2:29:2.60:0,3,481	0/0:7,0:7:17.95:0,18,146
chr10	90585265	.	CCTA	C	1279.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.927;DP=811;FS=3.651;HRun=0;HaplotypeScore=111.2421;InbreedingCoeff=0.9996;MQ=85.10;MQ0=0;MQRankSum=-3.977;QD=32.81;ReadPosRankSum=2.596;VQSLOD=3.8094;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:78.27:1374,78,0	0/0:11,0:11:33.11:0,33,759	0/0:27,0:27:78.27:0,78,1736	0/0:24,0:24:69.23:0,69,1531	0/0:19,0:19:57.20:0,57,1326	0/0:23,0:23:69.22:0,69,1565	0/0:33,0:33:99:0,99,2314	0/0:37,0:37:99:0,105,2327	0/0:28,0:28:84.26:0,84,1883	0/0:32,0:32:96.33:0,96,2216	0/0:14,0:14:42.14:0,42,971	0/0:33,0:33:99:0,99,2341	0/0:33,0:33:96.33:0,96,2249	0/0:41,0:41:99:0,120,2823	0/0:42,0:42:99:0,123,2859	0/0:43,0:42:99:0,129,2938	0/0:35,0:35:84.67:0,85,2302	0/0:21,0:21:60.21:0,60,1378	0/0:27,0:27:81.27:0,81,1812	0/0:23,0:23:69.24:0,69,1621	0/0:42,0:42:99:0,123,2858	0/0:22,0:22:66.23:0,66,1512	0/0:19,0:19:54.19:0,54,1277	0/0:39,0:39:99:0,117,2637	0/0:22,0:22:66.23:0,66,1538	0/0:38,0:38:99:0,111,2605	0/0:32,0:32:96.30:0,96,2176	0/0:12,0:12:36.12:0,36,851
chr10	90585878	.	GCACATGCACACACTGCCTC	G	6205.21	PASS	AC=46;AF=0.885;AN=52;BaseQRankSum=-2.416;DP=629;FS=0.000;HRun=0;HaplotypeScore=270.2016;InbreedingCoeff=0.2270;MQ=75.17;MQ0=2;MQRankSum=2.382;QD=12.12;ReadPosRankSum=2.382;VQSLOD=2.7699;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:43,0:43:8.99:145,9,0	1/1:6,4:10:3.01:150,3,0	0/0:30,0:24:0.89:0,1,2	0/0:30,0:25:0.89:0,1,2	1/1:14,6:20:3.01:54,3,0	1/1:18,0:18:6.02:117,6,0	1/1:33,0:33:18.02:373,18,0	0/0:32,0:31:0:0,0,0	1/1:9,0:9:6.02:249,6,0	1/1:29,0:29:18.05:424,18,0	./.	1/1:14,16:30:9.50:452,10,0	1/1:14,0:14:9.03:209,9,0	1/1:8,10:18:3.01:150,3,0	1/1:16,20:36:9.03:451,9,0	1/1:14,15:29:9.03:451,9,0	1/1:12,0:12:6.02:129,6,0	1/1:14,1:15:18.06:562,18,0	1/1:25,0:25:6.02:142,6,0	1/1:14,2:16:21.04:548,21,0	1/1:40,0:39:9:121,9,0	./.	1/1:9,5:14:2.63:143,3,0	1/1:27,0:27:15.05:300,15,0	1/1:11,7:18:3.01:109,3,0	1/1:21,8:29:14.86:175,15,0	1/1:13,10:23:12.04:601,12,0	1/1:2,2:4:3.01:150,3,0
chr10	90588017	.	AG	A	1614.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.968;DP=689;FS=1.997;HRun=1;HaplotypeScore=69.5939;InbreedingCoeff=0.9983;MQ=61.42;MQ0=0;MQRankSum=3.555;QD=33.64;ReadPosRankSum=0.067;VQSLOD=3.3012;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,47:48:99:1709,116,0	0/0:11,0:11:30.10:0,30,480	0/0:19,0:18:48.16:0,48,762	0/0:26,0:26:78.27:0,78,1243	0/0:18,0:18:39.12:0,39,599	0/0:29,0:29:84.27:0,84,1319	0/0:21,0:21:60.20:0,60,953	0/0:28,0:28:75.23:0,75,1150	0/0:16,0:16:48.16:0,48,767	0/0:16,0:16:45.14:0,45,678	0/0:15,0:15:39.13:0,39,619	0/0:34,0:34:96.33:0,96,1532	0/0:27,0:27:81.28:0,81,1288	0/0:22,0:22:66.23:0,66,1051	0/0:47,0:47:99:0,141,2203	0/0:33,0:33:97.19:0,97,1511	0/0:41,0:40:99:0,120,1869	0/0:28,0:28:81.28:0,81,1295	0/0:22,0:22:63.20:0,63,978	0/0:16,0:16:45.14:0,45,696	0/0:40,0:40:99:0,114,1790	0/0:11,0:11:33.10:0,33,501	0/0:10,0:10:30.10:0,30,479	0/0:22,0:22:66.21:0,66,1031	0/0:14,0:14:36.11:0,36,551	0/0:26,0:26:75.24:0,75,1157	0/0:37,0:37:99:0,111,1767	0/0:12,0:12:36.12:0,36,575
chr10	90588239	.	GTC	G	18798.48	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-6.367;DP=720;FS=4.015;HRun=0;HaplotypeScore=105.6588;InbreedingCoeff=0.9998;MQ=87.09;MQ0=3;MQRankSum=-4.793;QD=37.90;ReadPosRankSum=3.250;VQSLOD=6.9562;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,1795	1/1:0,9:9:27.09:387,27,0	0/0:28,0:28:80.79:0,81,1318	0/0:22,0:22:45.23:0,45,687	1/1:0,24:24:66.22:945,66,0	1/1:0,23:23:63.21:903,63,0	1/1:0,16:16:33.11:473,33,0	1/1:6,38:44:99:1555,111,0	1/1:2,18:20:50.67:730,51,0	0/0:36,0:36:99:0,105,1890	0/0:22,0:22:57.18:0,57,1014	1/1:1,27:28:72.24:1032,72,0	1/1:2,30:32:84.28:1204,84,0	1/1:0,20:20:60.20:860,60,0	1/1:3,30:32:87.29:1247,87,0	0/0:33,0:33:96.32:0,96,1723	1/1:0,33:32:84.28:1203,84,0	0/0:24,0:24:63.22:0,63,1147	1/1:0,18:18:54.15:753,54,0	1/1:1,30:31:81.27:1160,81,0	1/1:0,24:24:60.20:860,60,0	1/1:0,20:20:54.18:764,54,0	1/1:0,16:16:45.10:645,45,0	1/1:0,21:21:54.18:774,54,0	0/0:23,0:23:66.23:0,66,1210	1/1:2,27:28:78.26:1116,78,0	1/1:3,38:41:99:1588,111,0	1/1:0,14:14:42.14:602,42,0
chr10	90588767	.	TG	T	2224.69	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.250;DP=372;FS=5.356;HRun=1;HaplotypeScore=37.2968;InbreedingCoeff=0.9658;MQ=67.94;MQ0=0;MQRankSum=-0.564;QD=31.78;ReadPosRankSum=4.389;VQSLOD=3.0552;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.16:0,72,875	0/0:7,0:7:21.04:0,21,253	0/0:12,0:10:22.91:0,23,194	0/0:7,0:7:15.62:0,16,164	0/0:15,0:15:42.04:0,42,503	0/0:20,0:20:57.10:0,57,676	0/0:5,0:4:12.02:0,12,143	0/0:21,0:21:52.67:0,53,647	0/0:7,0:7:21.07:0,21,275	1/1:0,8:8:24.08:333,24,0	1/1:0,14:14:33.02:409,33,0	0/0:17,0:17:47.12:0,47,528	0/0:12,0:12:32.26:0,32,356	0/0:14,0:14:42.07:0,42,493	0/0:9,0:9:27.09:0,27,354	1/1:0,7:7:15.05:208,15,0	0/0:27,0:26:74.44:0,74,959	1/1:0,33:32:90.30:1239,90,0	0/0:19,0:18:54.07:0,54,623	0/0:16,0:16:25.30:0,25,460	0/0:10,0:10:29.93:0,30,276	0/0:4,0:4:11.99:0,12,111	0/0:6,0:6:18.04:0,18,218	0/0:6,0:6:17.99:0,18,175	1/1:0,8:8:15.05:208,15,0	0/0:19,1:19:18.58:0,19,685	0/0:14,0:14:35.30:0,35,376	0/0:10,0:10:26.84:0,27,311
chr10	90588768	.	GT	G	669.51	PASS	AB=0.962;AC=12;AF=0.214;AN=56;BaseQRankSum=10.790;DP=369;FS=2.534;HRun=11;HaplotypeScore=46.1494;InbreedingCoeff=0.6839;MQ=65.04;MQ0=2;MQRankSum=1.432;QD=7.52;ReadPosRankSum=2.866;VQSLOD=1.4673;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:63.05:0,63,635	0/0:6,0:6:18.02:0,18,178	0/0:11,0:9:6.40:0,6,47	0/1:6,0:6:13.32:13,0,84	0/0:15,0:15:33.04:0,33,334	0/0:20,0:20:42.11:0,42,448	0/0:5,0:4:9.02:0,9,96	0/0:20,1:22:28.67:0,29,457	0/0:7,0:7:21.05:0,21,224	1/1:8,0:8:22.45:105,22,0	1/1:14,0:14:25.78:129,26,0	0/0:16,1:16:11.36:0,11,312	0/1:11,1:11:3.59:4,0,171	0/0:13,0:13:30.06:0,30,311	0/0:9,0:9:27.07:0,27,285	1/1:7,0:7:14.20:68,14,0	0/0:26,1:26:47.54:0,48,711	1/1:34,0:33:79.44:453,79,0	0/0:18,0:17:36.08:0,36,378	0/0:16,1:17:8.42:0,8,281	0/0:9,0:9:9.02:0,9,91	0/0:4,0:4:3.01:0,3,32	0/0:6,0:6:15.02:0,15,152	0/0:6,0:6:6.02:0,6,64	1/1:8,0:8:14.24:70,14,0	0/0:19,0:18:40.36:0,40,530	0/0:13,0:13:24.52:0,25,244	0/0:9,1:10:5.43:0,5,263
chr10	90591132	.	TTCTAGAAG	T	553.43	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.893;DP=614;FS=8.258;HRun=0;HaplotypeScore=170.9954;InbreedingCoeff=0.9967;MQ=73.57;MQ0=0;MQRankSum=-4.595;QD=50.31;ReadPosRankSum=-0.693;VQSLOD=2.9009;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,9:11:24.08:647,24,0	0/0:17,0:17:51.18:0,51,2256	0/0:18,0:18:53.76:0,54,2025	0/0:10,0:10:27.09:0,27,1153	0/0:35,0:35:99:0,105,4597	0/0:29,0:29:84.29:0,84,3606	0/0:23,0:23:69.24:0,69,3003	0/0:32,0:32:96.32:0,96,3918	0/0:26,0:26:72.25:0,72,3048	0/0:22,0:22:60.20:0,60,915	0/0:23,0:23:69.23:0,69,1004	0/0:21,0:21:63.22:0,63,2688	0/0:18,0:18:54.17:0,54,2268	0/0:25,0:25:75.26:0,75,3176	0/0:43,0:43:99:0,120,5143	0/0:27,0:27:75.24:0,75,1080	0/0:21,0:21:63.22:0,63,2632	0/0:12,0:12:36.12:0,36,528	0/0:26,0:26:69.24:0,69,2955	0/0:19,0:19:54.19:0,54,2402	0/0:17,0:17:48.16:0,48,2024	0/0:19,0:19:54.19:0,54,2415	0/0:14,0:14:42.14:0,42,1830	0/0:18,0:18:54.17:0,54,2187	0/0:20,0:20:60.20:0,60,869	0/0:28,0:28:84.28:0,84,3533	0/0:27,0:27:78.27:0,78,3373	0/0:13,0:13:39.13:0,39,1742
chr10	90591135	.	TAGA	T	5202.28	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.990;DP=618;FS=3.539;HRun=0;HaplotypeScore=90.3849;InbreedingCoeff=0.9988;MQ=73.54;MQ0=0;MQRankSum=-3.125;QD=44.09;ReadPosRankSum=3.860;VQSLOD=6.7046;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:20.83:147,21,0	0/0:18,0:18:54.19:0,54,1245	0/0:18,0:18:51.06:0,51,1044	0/0:9,0:10:27.09:0,27,613	0/0:36,0:36:99:0,108,2472	0/0:28,0:28:84.29:0,84,1916	0/0:23,0:23:69.24:0,69,1589	0/0:35,0:35:99:0,102,2286	0/0:24,0:24:72.25:0,72,1624	1/1:2,21:23:63.18:1014,63,0	1/1:0,23:23:69.24:1176,69,0	0/0:21,0:21:63.20:0,63,1402	0/0:18,0:18:51.18:0,51,1175	0/0:27,0:27:78.25:0,78,1717	0/0:41,0:41:99:0,120,2732	1/1:0,27:27:72.25:1228,72,0	0/0:21,0:21:63.20:0,63,1388	1/1:0,13:13:36.12:614,36,0	0/0:23,0:23:69.24:0,69,1589	0/0:19,0:19:57.20:0,57,1315	0/0:18,0:18:51.18:0,51,1135	0/0:19,0:19:57.20:0,57,1316	0/0:15,0:15:45.15:0,45,1016	0/0:18,0:18:54.17:0,54,1199	1/1:0,23:23:60.21:1023,60,0	0/0:26,1:27:30.13:0,30,1748	0/0:26,0:26:78.25:0,78,1753	0/0:15,0:15:45.15:0,45,1037
chr10	90591376	.	GTTCCCAA	G	17586.95	PASS	AB=0.818;AC=51;AF=0.911;AN=56;BaseQRankSum=7.998;DP=391;FS=23.217;HRun=0;HaplotypeScore=327.2644;InbreedingCoeff=0.6204;MQ=118.49;MQ0=2;MQRankSum=-13.032;QD=61.71;ReadPosRankSum=11.295;VQSLOD=2.9411;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:27.09:607,27,0	1/1:0,3:3:9.03:206,9,0	0/0:41,1:36:82.17:0,82,2624	0/0:46,1:54:99:0,159,3722	1/1:0,9:9:21.06:409,21,0	1/1:0,13:13:39.13:883,39,0	1/1:2,7:9:27.08:547,27,0	1/1:0,1:1:3.01:71,3,0	1/1:2,10:12:36.12:779,36,0	1/1:1,0:10:30.10:694,30,0	1/1:0,0:7:21.07:462,21,0	1/1:0,23:23:69.24:1570,69,0	1/1:1,24:25:75.26:1699,75,0	1/1:2,22:24:72.25:1631,72,0	1/1:2,19:21:63.20:1372,63,0	1/1:2,1:22:63.22:1422,63,0	1/1:0,6:6:18.06:403,18,0	1/1:1,0:8:24.08:561,24,0	0/1:7,2:9:99:128,0,363	1/1:1,7:8:24.08:505,24,0	1/1:1,3:4:11.51:159,12,0	1/1:1,5:6:18.06:378,18,0	1/1:1,5:6:17.42:310,17,0	1/1:0,5:5:9.03:200,9,0	1/1:3,0:17:50.72:998,51,0	1/1:2,5:7:18.06:413,18,0	1/1:2,15:17:51.17:1110,51,0	1/1:1,1:1:3.01:70,3,0
chr10	90591382	.	AAAGAGACATGCCTGTGT	A	32113.77	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-3.848;DP=372;FS=13.376;HRun=0;HaplotypeScore=343.3164;InbreedingCoeff=0.6083;MQ=121.35;MQ0=2;MQRankSum=-12.750;QD=122.11;ReadPosRankSum=12.679;VQSLOD=2.9186;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:27.09:1149,27,0	1/1:3,0:3:9.03:394,9,0	0/0:48,0:36:99:0,106,2644	0/0:61,0:55:29.74:0,30,3650	1/1:9,0:9:21.07:818,21,0	1/1:13,0:13:39.13:1698,39,0	1/1:7,0:7:21.07:917,21,0	1/1:1,0:1:3.01:133,3,0	1/1:10,0:10:30.10:1311,30,0	1/1:0,9:9:27.09:1207,27,0	1/1:0,7:7:21.07:855,21,0	1/1:23,0:23:69.24:3014,69,0	1/1:25,0:25:75.26:3270,75,0	1/1:22,0:22:66.23:2887,66,0	1/1:19,0:19:57.20:2492,57,0	1/1:1,19:20:60.21:2631,60,0	1/1:6,0:6:18.06:779,18,0	1/1:0,7:7:21.07:935,21,0	0/1:9,0:9:99:253,0,524	1/1:7,0:7:21.07:878,21,0	1/1:3,0:3:9.03:298,9,0	1/1:6,0:6:18.06:753,18,0	1/1:5,0:5:15.05:570,15,0	1/1:5,0:5:8.82:389,9,0	1/1:0,14:14:42.14:1717,42,0	1/1:5,0:5:15.05:668,15,0	1/1:15,0:15:45.15:1965,45,0	1/1:2,0:1:3.01:133,3,0
chr10	90591387	.	GACATGCCTGTGTGA	G	23125.94	PASS	AB=0.818;AC=51;AF=0.911;AN=56;BaseQRankSum=2.823;DP=375;FS=13.163;HRun=0;HaplotypeScore=355.9833;InbreedingCoeff=0.6092;MQ=122.98;MQ0=2;MQRankSum=-12.928;QD=87.93;ReadPosRankSum=12.492;VQSLOD=2.6737;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:27.09:860,27,0	1/1:0,3:3:9.03:301,9,0	0/0:48,1:37:57.73:0,58,2827	0/0:62,1:57:84.06:0,84,3819	1/1:0,9:9:21.07:593,21,0	1/1:0,13:13:39.13:1290,39,0	1/1:0,7:7:21.07:696,21,0	1/1:0,1:1:3.01:100,3,0	1/1:0,10:10:30.10:999,30,0	1/1:9,0:9:27.09:733,27,0	1/1:7,0:7:21.07:489,21,0	1/1:0,23:23:69.24:2297,69,0	1/1:0,24:25:75.26:2487,75,0	1/1:0,22:22:66.23:2197,66,0	1/1:0,19:19:57.20:1893,57,0	1/1:19,1:20:60.21:1604,60,0	1/1:0,6:6:18.06:594,18,0	1/1:7,0:7:21.07:567,21,0	0/1:7,2:9:99:188,0,509	1/1:0,7:7:21.07:659,21,0	1/1:0,3:3:9.03:202,9,0	1/1:0,6:6:18.06:590,18,0	1/1:0,5:5:15.05:417,15,0	1/1:0,5:5:9.03:296,9,0	1/1:14,0:14:42.11:985,42,0	1/1:0,5:5:15.05:500,15,0	1/1:0,15:15:45.15:1486,45,0	1/1:1,1:1:3.01:103,3,0
chr10	90591394	.	C	CAG	4091.75	PASS	AB=0.988;AC=31;AF=0.554;AN=56;BaseQRankSum=-11.325;DP=497;FS=10.990;HRun=0;HaplotypeScore=379.0920;InbreedingCoeff=-0.4072;MQ=108.47;MQ0=2;MQRankSum=-3.803;QD=9.61;ReadPosRankSum=-10.416;VQSLOD=0.6088;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:28.36:288,0,28	0/1:7,0:7:27.39:53,0,27	0/1:53,0:43:47.08:47,0,943	0/0:56,0:52:24.94:0,25,1297	1/1:15,0:15:8.15:207,8,0	0/1:21,0:21:31.21:353,0,31	0/1:14,0:14:54.49:112,0,54	1/1:5,0:5:15.04:178,15,0	0/1:13,0:13:69.31:72,0,69	0/0:11,0:11:9.78:0,10,101	1/1:7,0:7:4.26:142,4,0	0/1:29,0:29:99:223,0,183	0/1:28,0:28:99:202,0,184	0/1:25,0:25:73.90:74,0,220	0/1:28,0:28:99:188,0,178	0/1:20,2:22:99:165,0,149	1/1:13,0:13:1.86:252,2,0	0/1:8,0:8:46.22:46,0,48	0/1:11,0:11:54.77:55,0,106	0/1:15,0:15:0.08:222,0,0	1/1:11,0:11:6.29:74,6,0	0/1:10,0:10:13.18:88,0,13	1/1:13,0:13:0.84:131,1,0	0/1:8,0:8:15.54:62,0,16	0/1:14,2:16:0.24:434,0,0	0/1:9,0:9:0.76:201,0,1	0/1:22,0:22:99:221,0,111	0/0:2,0:1:2.84:0,3,14
chr10	90591401	.	A	AGG	12999.56	PASS	AB=0.930;AC=50;AF=0.893;AN=56;BaseQRankSum=-4.478;DP=595;FS=7.097;HRun=1;HaplotypeScore=370.8238;InbreedingCoeff=-0.0873;MQ=98.41;MQ0=1;MQRankSum=-5.677;QD=21.85;ReadPosRankSum=-0.513;VQSLOD=2.5356;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,15:38:65.74:808,66,0	1/1:5,5:10:26.83:261,27,0	1/1:12,9:40:39.45:963,39,0	0/1:25,5:50:99:642,0,183	1/1:12,8:20:27.86:394,28,0	1/1:16,10:26:71.85:944,72,0	1/1:8,9:17:38.79:409,39,0	1/1:7,6:15:45.11:707,45,0	1/1:13,5:19:38.86:414,39,0	0/1:12,0:13:8.36:8,0,135	0/1:11,0:11:23.53:59,0,24	1/1:23,9:32:83.58:899,84,0	1/1:26,4:30:83.54:841,84,0	1/1:23,3:26:77.46:721,77,0	1/1:21,13:35:83.55:873,84,0	0/1:27,0:27:99:122,0,181	1/1:6,8:14:36.01:548,36,0	0/1:13,0:13:29.08:29,0,76	1/1:11,3:14:30.07:426,30,0	1/1:8,9:17:35.87:472,36,0	1/1:7,11:19:18.51:228,19,0	1/1:7,5:12:21.10:231,21,0	1/1:6,8:14:19.58:284,20,0	1/1:6,4:11:12.17:153,12,0	0/1:19,0:19:23.10:230,0,23	1/1:7,4:12:33.06:468,33,0	1/1:17,8:25:70.95:840,71,0	1/1:2,0:1:3:25,3,0
chr10	90593126	.	G	GA	830.36	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.671;DP=672;FS=2.045;HRun=10;HaplotypeScore=99.3893;InbreedingCoeff=0.7247;MQ=63.88;MQ0=6;MQRankSum=-1.343;QD=16.61;ReadPosRankSum=2.458;VQSLOD=3.9973;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,40:50:71.35:925,71,0	0/0:9,0:9:26.97:0,27,222	0/0:23,0:14:9.82:0,10,116	0/0:22,0:14:8.04:0,8,46	0/0:25,0:25:62.26:0,62,498	0/0:19,0:19:53.92:0,54,439	0/0:25,0:25:56.86:0,57,460	0/0:21,0:24:51.85:0,52,399	0/0:18,0:18:44.92:0,45,364	0/0:22,0:23:52.91:0,53,420	0/0:10,0:10:20.96:0,21,172	0/0:32,1:33:39.83:0,40,524	0/0:21,0:21:52.95:0,53,422	0/0:19,0:19:47.76:0,48,385	0/0:28,1:30:44.91:0,45,557	0/0:28,0:28:68.87:0,69,559	0/0:39,0:39:99:0,105,852	0/0:17,0:17:38.95:0,39,320	0/0:14,0:13:17.02:0,17,205	0/0:24,0:24:59.91:0,60,492	0/0:23,0:24:61.89:0,62,485	0/0:19,0:19:46.93:0,47,361	0/0:20,0:19:47.94:0,48,394	0/0:29,1:31:50.90:0,51,603	0/0:25,0:26:61.92:0,62,495	0/0:26,1:30:37.17:0,37,454	0/0:23,2:26:0.88:0,1,391	0/0:20,0:19:53.94:0,54,443
chr10	90595309	.	TTTTG	T	2389.45	PASS	AB=0.984;AC=30;AF=0.556;AN=54;BaseQRankSum=8.995;DP=455;FS=1.376;HRun=0;HaplotypeScore=97.2161;InbreedingCoeff=0.2962;MQ=49.12;MQ0=35;MQRankSum=-4.841;QD=7.61;ReadPosRankSum=1.821;VQSLOD=2.2522;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:22:34.74:35,0,244	./.	0/0:10,0:6:10.65:0,11,128	0/0:7,0:4:8.81:0,9,95	0/1:17,0:14:45.99:78,0,46	1/1:20,1:19:8.32:192,8,0	1/1:15,0:12:1.23:97,1,0	0/1:26,2:27:54.77:286,0,55	1/1:9,0:9:18.90:144,19,0	0/0:13,0:10:26.52:0,27,399	0/0:20,0:19:47.04:0,47,594	1/1:13,1:14:33.49:199,33,0	1/1:17,0:17:29.58:169,30,0	1/1:15,0:15:27.78:156,28,0	0/1:16,0:14:34.77:35,0,136	0/0:16,0:16:30.59:0,31,329	0/0:19,0:14:18.42:0,18,197	0/0:27,0:21:41.93:0,42,546	1/1:15,1:13:8.65:208,9,0	1/1:12,1:12:29.30:207,29,0	1/1:16,0:14:1.18:85,1,0	0/1:15,0:11:10.36:91,0,10	1/1:14,0:13:3.85:116,4,0	0/1:16,0:12:21.65:28,0,22	0/0:26,0:23:67.03:0,67,858	1/1:20,1:17:16.76:242,17,0	0/1:15,1:15:9.13:128,0,9	0/1:10,0:9:48.48:82,0,48
chr10	90595310	.	TTTG	T	5220.35	PASS	AB=0.961;AC=38;AF=0.679;AN=56;BaseQRankSum=6.877;DP=448;FS=2.028;HRun=0;HaplotypeScore=82.2951;InbreedingCoeff=0.6662;MQ=48.86;MQ0=35;MQRankSum=-4.249;QD=16.31;ReadPosRankSum=-0.229;VQSLOD=4.5984;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:21:43.08:43,0,122	1/1:4,0:2:2.98:21,3,0	0/1:10,0:6:1.54:2,0,83	0/0:7,0:4:11.49:0,11,91	0/1:13,3:13:11.89:168,0,12	1/1:16,5:19:52.70:448,53,0	1/1:9,5:11:26.66:213,27,0	1/1:21,8:28:42.29:599,42,0	1/1:7,2:9:26.73:230,27,0	0/0:13,0:10:26.31:0,26,311	0/0:20,0:19:43.11:0,43,418	1/1:14,2:16:44.10:352,44,0	1/1:10,6:16:44.32:399,44,0	1/1:11,3:14:38.17:328,38,0	0/1:16,0:14:44.60:45,0,58	0/0:16,0:16:23.32:0,23,251	0/0:19,0:14:16.68:0,17,108	0/0:28,0:22:47.49:0,47,460	1/1:13,3:13:34.44:351,34,0	1/1:7,6:12:29.97:344,30,0	1/1:7,8:13:17.69:206,18,0	1/1:9,6:11:22.25:203,22,0	1/1:7,6:12:25.82:270,26,0	1/1:15,1:12:6.91:63,7,0	0/0:25,0:22:58.47:0,58,599	1/1:14,6:16:43.72:421,44,0	1/1:10,6:15:37.14:346,37,0	1/1:5,2:6:17.84:168,18,0
chr10	90595315	.	TTC	T	1501.86	PASS	AB=0.993;AC=30;AF=0.536;AN=56;BaseQRankSum=8.916;DP=444;FS=28.010;HRun=0;HaplotypeScore=85.8811;InbreedingCoeff=0.2308;MQ=44.71;MQ0=37;MQRankSum=-2.308;QD=4.78;ReadPosRankSum=2.823;VQSLOD=1.1170;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:20:25.89:26,0,209	0/0:4,0:2:3.01:0,3,40	0/1:4,0:2:4.73:5,0,39	0/0:4,0:3:5.48:0,5,32	0/1:15,0:12:0.36:53,0,0	1/1:18,0:16:3.10:176,3,0	0/1:18,0:15:17.81:57,0,18	0/1:25,2:25:52.36:140,0,52	1/1:11,0:11:22.30:103,22,0	0/0:16,0:13:35.11:0,35,502	0/0:16,0:15:35.63:0,36,455	1/1:16,1:17:17.62:163,18,0	1/1:16,0:16:17.05:131,17,0	1/1:17,0:17:11.96:127,12,0	0/1:13,0:11:30.38:30,0,98	0/0:16,0:16:15.83:0,16,506	0/0:22,0:17:20.93:0,21,274	0/0:28,0:22:48.11:0,48,767	0/1:17,0:14:26.83:81,0,27	1/1:15,0:14:7.04:96,7,0	0/1:14,0:12:18.99:34,0,19	1/1:14,0:10:18.01:92,18,0	1/1:12,0:10:6.91:76,7,0	1/1:16,1:14:5.52:48,6,0	0/0:24,0:21:38.59:0,39,801	1/1:24,0:20:22.99:147,23,0	0/1:15,0:14:29.32:67,0,29	0/1:7,0:6:9.11:35,0,9
chr10	90595317	.	CT	C	3699.57	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=6.543;DP=447;FS=4.238;HRun=7;HaplotypeScore=74.1345;InbreedingCoeff=0.8663;MQ=43.46;MQ0=37;MQRankSum=-2.985;QD=13.40;ReadPosRankSum=1.952;VQSLOD=3.2360;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:20:13.11:0,13,112	0/0:4,0:2:3.01:0,3,32	0/0:4,0:2:3.01:0,3,34	0/0:3,0:2:3:0,3,29	1/1:6,8:11:15:152,15,0	1/1:6,12:16:33.06:332,33,0	1/1:7,11:15:15.03:153,15,0	1/1:12,15:26:32.17:402,32,0	1/1:3,8:11:24.02:235,24,0	0/0:16,0:13:24.07:0,24,291	0/0:16,0:15:26.61:0,27,287	1/1:13,4:17:16.73:158,17,0	1/1:8,8:16:20.87:213,21,0	1/1:9,8:17:15.03:151,15,0	0/0:13,0:11:7.43:0,7,73	0/0:16,0:16:30.02:0,30,366	0/0:22,0:17:18.06:0,18,221	0/0:28,0:22:42.10:0,42,507	1/1:6,11:14:33.07:332,33,0	1/1:3,12:14:27.05:274,27,0	1/1:8,6:12:9.02:92,9,0	1/1:5,9:10:14.76:149,15,0	1/1:9,4:11:14.99:141,15,0	1/1:7,10:14:14.85:147,15,0	0/0:26,0:23:44.32:0,44,497	1/1:6,19:21:51.08:512,51,0	1/1:9,6:14:20.86:197,21,0	1/1:5,2:6:6.01:61,6,0
chr10	90595997	.	T	TA	320.10	PASS	AB=0.867;AC=13;AF=0.241;AN=54;BaseQRankSum=6.489;DP=501;FS=1.428;HRun=0;HaplotypeScore=56.0488;InbreedingCoeff=0.5427;MQ=41.06;MQ0=43;MQRankSum=-4.692;QD=2.78;ReadPosRankSum=-0.853;VQSLOD=2.3200;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:12:17.47:0,17,88	1/1:3,0:4:5.74:36,6,0	0/0:62,0:9:18.81:0,19,161	0/0:57,0:10:14.63:0,15,81	0/0:22,0:20:32.92:0,33,369	0/0:18,0:16:33.08:0,33,426	0/0:9,0:7:21.07:0,21,269	0/0:27,0:12:33.01:0,33,417	0/0:16,0:13:18.06:0,18,235	1/1:11,3:14:0.58:78,1,0	1/1:7,0:5:4.03:21,4,0	0/0:8,0:8:17.85:0,18,215	0/0:9,0:7:17.59:0,18,186	0/0:11,0:11:9.03:0,9,119	0/1:10,1:6:3.23:31,0,3	1/1:6,0:1:2.96:19,3,0	1/1:21,3:19:22.28:111,22,0	0/1:27,2:15:18.51:77,0,19	0/0:29,0:19:37.93:0,38,509	0/0:16,0:16:41.99:0,42,500	0/0:10,0:8:17.97:0,18,214	./.	0/0:5,0:4:9.03:0,9,119	0/0:10,0:7:12.04:0,12,158	0/1:12,4:14:23.64:101,0,24	0/0:25,0:19:48.10:0,48,595	0/0:21,0:16:35.42:0,35,413	0/0:15,0:15:42.08:0,42,524
chr10	90596015	.	G	GA	1299.28	PASS	AB=1.000;AC=14;AF=0.259;AN=54;BaseQRankSum=7.922;DP=458;FS=1.238;HRun=16;HaplotypeScore=54.0440;InbreedingCoeff=0.7342;MQ=50.58;MQ0=40;MQRankSum=-4.103;QD=8.33;ReadPosRankSum=1.048;VQSLOD=2.7883;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,5:12:12.04:142,12,0	0/0:8,0:8:14.81:0,15,145	0/0:63,0:11:9.71:0,10,170	0/1:59,0:10:38.49:38,0,82	0/0:16,0:16:29.62:0,30,303	0/0:15,0:14:30.54:0,31,325	0/0:8,0:7:18.05:0,18,203	0/0:28,0:17:41.13:0,41,431	0/0:10,0:9:21.02:0,21,210	1/1:10,5:15:24.97:324,25,0	1/1:6,4:10:23.78:253,24,0	0/0:9,0:8:23.89:0,24,235	0/0:8,0:7:14.84:0,15,145	0/0:12,0:12:18.15:0,18,175	0/0:7,0:5:2.99:0,3,62	1/1:5,0:2:5.93:58,6,0	0/1:21,0:18:7.99:8,0,207	1/1:10,7:13:33.39:383,33,0	0/0:30,0:22:45.16:0,45,623	0/0:16,0:16:40.35:0,40,440	0/0:8,0:8:20.93:0,21,203	./.	0/0:7,0:6:11.99:0,12,135	0/0:7,0:6:15.03:0,15,159	1/1:2,15:16:21.07:275,21,0	0/0:21,0:17:36.09:0,36,398	0/0:17,0:15:21.37:0,21,289	0/0:12,0:12:32.81:0,33,337
chr10	90596219	.	CAA	C	6456.55	PASS	AB=0.636;AC=44;AF=0.786;AN=56;BaseQRankSum=-7.505;DP=517;FS=1.799;HRun=14;HaplotypeScore=70.6349;InbreedingCoeff=0.6904;MQ=52.28;MQ0=25;MQRankSum=3.688;QD=14.77;ReadPosRankSum=-0.107;VQSLOD=3.8703;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,21:28:43.43:422,43,0	0/0:2,0:8:15.21:0,15,85	0/0:11,0:4:11.87:0,12,139	0/0:11,0:8:2.57:0,3,76	1/1:7,6:12:17.66:151,18,0	1/1:3,8:10:14.87:186,15,0	1/1:5,15:22:32.61:335,33,0	1/1:17,22:39:45.36:538,45,0	1/1:3,11:12:29.74:254,30,0	1/1:6,9:15:23.58:253,24,0	1/1:3,4:6:11.95:111,12,0	1/1:5,12:16:32.51:324,33,0	1/1:4,11:15:22.07:243,22,0	1/1:8,12:19:29.83:265,30,0	0/0:7,0:17:7.60:0,8,75	1/1:3,16:18:48:443,48,0	0/0:15,0:27:46.92:0,47,267	0/1:10,10:18:31.91:248,0,32	1/1:8,13:22:29.71:320,30,0	1/1:4,8:12:20.96:194,21,0	1/1:8,10:16:7.53:203,8,0	0/1:2,3:5:9.76:47,0,10	1/1:2,12:13:32.90:302,33,0	1/1:8,11:20:20.60:225,21,0	1/1:7,11:20:22.70:298,23,0	1/1:13,22:30:56.82:524,57,0	1/1:5,14:19:26.65:296,27,0	1/1:4,10:16:11.64:274,12,0
chr10	90602155	.	T	TA	564.71	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-4.222;DP=361;FS=0.000;HRun=13;HaplotypeScore=41.8369;InbreedingCoeff=0.6746;MQ=52.55;MQ0=13;MQRankSum=-2.129;QD=10.27;ReadPosRankSum=-1.087;VQSLOD=2.0085;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:7:11.84:0,12,82	1/1:4,4:8:12.48:113,12,0	0/0:8,0:3:2.32:0,2,8	0/0:5,0:3:2.07:0,2,27	0/0:14,0:15:34.67:0,35,229	0/0:21,0:20:41.55:0,42,282	0/0:16,0:16:26.71:0,27,185	0/0:20,0:18:38.46:0,38,261	0/0:6,0:6:11.86:0,12,81	0/0:18,0:17:30.74:0,31,195	0/0:16,0:16:7.52:0,8,145	0/1:10,0:9:3.65:4,0,120	0/0:9,0:9:20.75:0,21,141	0/0:10,0:11:25.83:0,26,169	1/1:5,9:14:20.95:185,21,0	0/0:5,0:6:13.94:0,14,88	1/1:3,20:23:32.77:403,33,0	0/0:21,1:22:28.85:0,29,316	0/0:6,0:6:14.85:0,15,100	0/0:15,0:16:28.67:0,29,187	0/0:12,0:11:29.74:0,30,205	0/0:4,0:4:5.92:0,6,40	0/0:8,0:9:8.51:0,9,57	0/0:3,0:3:7.99:0,8,47	0/0:25,1:26:29.07:0,29,343	0/0:19,0:19:41.55:0,42,287	0/0:14,0:14:29.53:0,30,202	0/0:9,0:9:20.75:0,21,141
chr10	90603263	.	CTT	C	3089.02	PASS	AB=0.909;AC=35;AF=0.625;AN=56;BaseQRankSum=1.816;DP=203;FS=16.639;HRun=2;HaplotypeScore=37.0866;InbreedingCoeff=0.7487;MQ=85.81;MQ0=3;MQRankSum=-1.055;QD=29.70;ReadPosRankSum=-0.644;VQSLOD=1.4318;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:36.09:0,36,685	0/0:5,0:5:15.04:0,15,268	0/0:15,0:10:26.06:0,26,410	0/1:9,1:7:15.54:16,0,93	1/1:2,5:7:21.07:336,21,0	1/1:1,10:9:21.07:338,21,0	1/1:0,3:2:6.02:98,6,0	1/1:1,8:10:17.69:265,18,0	1/1:0,8:8:21.07:342,21,0	0/0:11,0:11:28.54:0,29,607	0/0:9,0:9:24.03:0,24,400	1/1:0,2:2:6.02:98,6,0	1/1:0,5:5:9.03:147,9,0	1/1:2,0:1:3:25,3,0	0/0:4,0:4:9.02:0,9,149	0/0:3,0:3:6.02:0,6,112	0/0:17,0:17:43.41:0,43,718	0/0:14,0:14:33.55:0,34,631	1/1:0,9:8:24.07:363,24,0	1/1:0,6:6:18.06:293,18,0	1/1:0,2:2:6.02:98,6,0	1/1:0,4:4:9.03:142,9,0	1/1:0,2:2:6.02:98,6,0	1/1:0,3:3:3.01:49,3,0	0/0:7,0:7:21.07:0,21,424	1/1:4,8:11:27.08:419,27,0	1/1:0,2:2:6.02:98,6,0	1/1:5,0:5:8.97:71,9,0
chr10	90603269	.	C	CTTTTT	7297.57	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-0.341;DP=295;FS=3.852;HRun=17;HaplotypeScore=118.7434;InbreedingCoeff=0.4434;MQ=71.06;MQ0=6;MQRankSum=-3.658;QD=26.25;ReadPosRankSum=-0.102;VQSLOD=3.4101;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:15:36.10:596,36,0	1/1:3,3:7:14.98:233,15,0	0/0:15,0:8:0.97:0,1,10	0/1:17,0:10:0.15:0,0,59	1/1:14,0:14:27.04:437,27,0	1/1:17,0:16:37.64:612,38,0	0/1:3,0:2:0:0,0,0	1/1:19,0:16:30.26:465,30,0	1/1:11,0:11:12.04:194,12,0	1/1:15,0:15:24.04:383,24,0	1/1:9,0:8:9.03:168,9,0	1/1:5,0:5:9.03:180,9,0	1/1:7,0:7:12.04:218,12,0	1/1:4,0:3:9.03:197,9,0	1/1:6,0:6:18.06:280,18,0	1/1:5,0:5:8.39:143,8,0	1/1:11,1:15:33.10:557,33,0	1/1:12,0:16:4.47:230,4,0	1/1:8,0:7:9.01:111,9,0	1/1:10,0:9:17.71:280,18,0	1/1:4,0:3:6:57,6,0	1/1:4,0:4:3.01:58,3,0	1/1:7,0:7:11.40:156,11,0	0/1:1,0:1:0:0,0,0	1/1:13,0:12:21.07:472,21,0	1/1:20,0:16:25.58:356,26,0	1/1:11,0:10:21.04:379,21,0	1/1:13,0:13:30.06:534,30,0
chr10	90603321	.	T	TA	2098.50	PASS	AB=1.000;AC=42;AF=0.840;AN=50;BaseQRankSum=-4.298;DP=345;FS=1.610;HRun=10;HaplotypeScore=70.6845;InbreedingCoeff=0.5212;MQ=72.27;MQ0=25;MQRankSum=0.242;QD=6.86;ReadPosRankSum=-0.388;VQSLOD=1.5348;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,5:11:13.51:130,14,0	0/0:6,0:6:9.30:0,9,63	0/1:77,0:20:9.03:9,0,85	0/1:77,0:24:3.41:3,0,55	1/1:12,2:14:20.27:224,20,0	1/1:14,0:14:31.31:246,31,0	1/1:4,0:3:9:81,9,0	1/1:13,0:11:21.05:218,21,0	1/1:2,1:3:9:80,9,0	1/1:4,2:6:17.14:141,17,0	1/1:4,0:4:9:78,9,0	1/1:1,1:2:5.50:39,6,0	1/1:2,0:1:1.55:4,2,0	1/1:4,0:4:6.01:59,6,0	0/0:6,0:6:8.96:0,9,70	1/1:2,1:3:6.01:61,6,0	0/0:26,0:25:56.69:0,57,443	1/1:15,0:15:30.54:218,31,0	1/1:9,0:6:8.98:81,9,0	1/1:4,0:3:6.01:59,6,0	1/1:1,0:1:2.99:24,3,0	./.	./.	./.	1/1:5,2:7:9.37:117,9,0	1/1:9,0:9:13.51:143,14,0	1/1:9,1:9:13.26:120,13,0	1/1:15,0:15:12.28:107,12,0
chr10	90603331	.	AT	A	2097.12	PASS	AB=0.997;AC=42;AF=0.840;AN=50;BaseQRankSum=-3.448;DP=343;FS=2.357;HRun=1;HaplotypeScore=65.0374;InbreedingCoeff=0.2282;MQ=68.18;MQ0=27;MQRankSum=-0.324;QD=8.77;ReadPosRankSum=0.700;VQSLOD=1.0521;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:6.04:58,6,0	0/1:5,0:5:6.22:17,0,6	0/0:77,2:19:7.65:0,8,138	0/1:84,1:22:5.22:5,0,87	1/1:10,6:16:19.53:265,20,0	1/1:7,6:13:35.77:335,36,0	1/1:2,2:3:9.03:105,9,0	1/1:3,7:8:21.34:166,21,0	1/1:1,2:3:8.82:83,9,0	1/1:5,1:6:14.31:115,14,0	0/1:4,0:4:4.41:18,0,4	1/1:2,0:2:5.79:37,6,0	1/1:3,0:2:5.93:39,6,0	1/1:1,2:3:5.88:50,6,0	0/1:6,0:6:2.80:17,0,3	1/1:3,0:3:5.77:34,6,0	0/0:25,0:24:0.26:0,0,144	1/1:13,1:14:30.80:150,31,0	1/1:10,1:7:12.36:56,12,0	1/1:1,2:2:5.75:47,6,0	1/1:0,1:1:3.01:35,3,0	./.	./.	./.	1/1:7,0:7:11.84:70,12,0	1/1:6,4:10:11.32:115,11,0	1/1:6,1:6:11.16:78,11,0	1/1:12,2:14:39.71:325,40,0
chr10	90603332	.	TAA	T	1229.33	PASS	AB=0.905;AC=31;AF=0.620;AN=50;BaseQRankSum=-5.243;DP=346;FS=1.470;HRun=14;HaplotypeScore=74.2070;InbreedingCoeff=0.3682;MQ=70.70;MQ0=27;MQRankSum=-0.393;QD=8.60;ReadPosRankSum=2.965;VQSLOD=1.4151;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:9:15.23:0,15,128	1/1:3,1:4:8.92:72,9,0	0/0:80,0:21:27.47:0,27,208	0/0:85,0:22:28.81:0,29,254	0/1:10,6:16:15.09:160,0,15	1/1:13,0:13:22.34:170,22,0	1/1:4,0:3:8.95:68,9,0	1/1:9,1:8:14.98:134,15,0	1/1:3,0:3:5.96:43,6,0	0/1:6,0:6:4.82:16,0,5	0/0:4,0:4:8.51:0,9,44	1/1:2,0:2:2.99:25,3,0	1/1:3,0:2:2.88:16,3,0	1/1:3,0:3:2.95:26,3,0	1/1:2,3:6:8.68:67,9,0	0/0:3,0:3:0.89:0,1,2	1/1:9,13:24:26.15:265,26,0	0/0:13,0:14:30.96:0,31,178	1/1:9,2:7:8.98:82,9,0	1/1:3,0:2:2.98:26,3,0	1/1:1,0:1:2.98:21,3,0	./.	./.	./.	0/0:7,0:8:11.50:0,11,49	0/1:11,1:12:28.30:167,0,28	0/1:6,1:6:17.56:18,0,20	0/1:14,0:14:20.29:20,0,79
chr10	90606423	.	AACACACAC	A	9843.31	PASS	AB=0.833;AC=51;AF=0.981;AN=52;BaseQRankSum=0.795;DP=553;FS=0.000;HRun=0;HaplotypeScore=169.8625;InbreedingCoeff=-0.0593;MQ=54.40;MQ0=14;MQRankSum=2.037;QD=20.51;ReadPosRankSum=2.311;VQSLOD=3.8694;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:35:18.06:335,18,0	1/1:2,2:6:12.04:263,12,0	./.	./.	1/1:14,8:24:23.83:363,24,0	1/1:8,9:17:30.02:644,30,0	1/1:17,2:20:6.02:131,6,0	0/1:16,4:20:72.06:175,0,72	1/1:15,4:22:18.06:394,18,0	1/1:6,0:14:11.64:223,12,0	1/1:6,0:12:12.04:223,12,0	1/1:9,11:20:18.06:453,18,0	1/1:5,9:14:14.56:377,15,0	1/1:10,13:23:36.12:906,36,0	1/1:8,10:20:33.07:791,33,0	1/1:6,0:21:33.58:615,34,0	1/1:11,10:23:36.08:811,36,0	1/1:9,0:14:15.05:278,15,0	1/1:15,1:17:7:184,7,0	1/1:7,7:16:24.08:565,24,0	1/1:21,0:20:4.25:54,4,0	1/1:9,6:16:1.46:393,1,0	1/1:5,6:12:8.67:151,9,0	1/1:10,3:14:3.01:76,3,0	1/1:11,0:22:21.07:389,21,0	1/1:12,7:20:23.95:487,24,0	1/1:13,7:20:14.98:298,15,0	1/1:10,3:15:12.04:263,12,0
chr10	90607970	.	TA	T	5104.37	PASS	AB=0.889;AC=41;AF=0.732;AN=56;BaseQRankSum=6.718;DP=336;FS=2.372;HRun=9;HaplotypeScore=34.3466;InbreedingCoeff=0.8148;MQ=66.61;MQ0=13;MQRankSum=-2.754;QD=21.01;ReadPosRankSum=0.395;VQSLOD=4.9451;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:51.12:0,51,563	1/1:0,2:2:6:55,6,0	0/0:12,0:7:16.65:0,17,199	0/0:9,0:6:8.45:0,8,62	1/1:2,16:18:45.02:411,45,0	1/1:1,16:17:39.01:357,39,0	1/1:3,7:9:21.01:192,21,0	1/1:0,27:27:75.01:678,75,0	1/1:2,6:7:18.01:165,18,0	0/0:8,0:8:24.07:0,24,277	0/0:11,0:10:24.07:0,24,277	1/1:2,7:9:15.01:137,15,0	1/1:2,5:6:15.01:137,15,0	1/1:0,2:2:3:27,3,0	1/1:1,6:7:12.01:110,12,0	0/1:7,1:7:6.41:6,0,187	1/1:4,31:33:80.96:730,81,0	0/0:20,0:20:57.17:0,57,658	1/1:2,13:13:30:267,30,0	1/1:0,13:13:38.99:350,39,0	1/1:2,7:7:21.01:192,21,0	1/1:0,1:1:3:27,3,0	1/1:0,5:5:15.01:137,15,0	1/1:2,6:8:9:82,9,0	0/0:12,0:12:33.09:0,33,372	1/1:3,15:17:45.02:412,45,0	1/1:0,12:12:33.02:302,33,0	1/1:0,12:12:36.02:329,36,0
chr10	90608602	.	CT	C	2279.83	PASS	AB=0.751;AC=36;AF=0.643;AN=56;BaseQRankSum=0.886;DP=362;FS=15.713;HRun=14;HaplotypeScore=49.5781;InbreedingCoeff=0.6069;MQ=62.13;MQ0=2;MQRankSum=0.896;QD=9.27;ReadPosRankSum=0.508;VQSLOD=1.0246;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:18:29.71:205,30,0	0/0:5,0:5:15:0,15,135	1/1:12,0:7:4.45:15,4,0	0/1:9,0:8:6.30:6,0,22	1/1:3,14:17:29.54:202,30,0	1/1:2,12:14:29.75:206,30,0	1/1:1,4:5:11.85:79,12,0	1/1:12,26:37:42.45:425,42,0	0/1:4,4:8:15.97:50,0,16	0/0:16,0:17:27.02:0,27,248	0/0:10,0:10:18:0,18,159	0/1:6,4:10:13.04:67,0,13	1/1:5,5:10:8.84:62,9,0	1/1:1,11:12:23.04:163,23,0	0/0:11,0:10:8.23:0,8,63	0/0:6,0:7:17.85:0,18,149	0/0:19,1:21:30.21:0,30,390	0/0:28,1:28:23.35:0,23,411	0/1:4,6:10:7.03:102,0,7	1/1:5,8:12:17.72:120,18,0	1/1:5,0:5:2.87:18,3,0	1/1:2,2:4:5.90:38,6,0	1/1:4,2:6:5.93:41,6,0	1/1:2,3:5:5.94:41,6,0	0/0:13,0:15:29.70:0,30,248	1/1:3,12:15:34.72:224,35,0	1/1:7,16:23:34.47:231,34,0	1/1:3,8:10:26.76:185,27,0
chr10	90608772	.	T	TC	3113.13	PASS	AB=0.681;AC=36;AF=0.643;AN=56;BaseQRankSum=7.952;DP=400;FS=9.707;HRun=0;HaplotypeScore=60.3822;InbreedingCoeff=0.6452;MQ=58.88;MQ0=15;MQRankSum=-1.622;QD=11.36;ReadPosRankSum=3.480;VQSLOD=3.6878;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:30:68.92:0,69,782	1/1:5,0:5:10.54:52,11,0	0/0:11,0:5:9.01:0,9,97	0/0:5,0:2:3:0,3,25	1/1:4,13:15:22.16:283,22,0	1/1:3,13:17:18.05:203,18,0	1/1:7,8:13:24.06:278,24,0	1/1:6,13:17:27.19:366,27,0	0/1:3,7:10:5.53:114,0,6	0/0:17,0:16:45.33:0,45,507	0/0:6,0:5:11.99:0,12,142	1/1:1,11:12:14.93:145,15,0	1/1:2,4:5:8.42:76,8,0	1/1:2,5:6:11.86:112,12,0	1/1:14,0:14:12.97:84,13,0	0/0:15,0:13:35.99:0,36,407	1/1:26,0:25:15.44:105,15,0	0/0:29,0:28:61.70:0,62,669	1/1:5,10:12:22.08:181,22,0	1/1:9,4:13:11.76:131,12,0	1/1:14,6:18:35.44:315,35,0	1/1:4,3:7:7.82:90,8,0	0/1:1,4:5:5.13:53,0,5	1/1:10,8:17:36.24:375,36,0	0/0:9,0:9:23.97:0,24,246	1/1:8,6:12:30.42:284,30,0	0/1:25,1:25:13.86:29,0,14	0/1:3,5:7:8.62:38,0,9
chr10	90608773	.	T	TC	4063.82	PASS	AC=40;AF=0.741;AN=54;BaseQRankSum=7.887;DP=405;FS=0.000;HRun=4;HaplotypeScore=61.7780;InbreedingCoeff=0.9057;MQ=58.63;MQ0=16;MQRankSum=-2.543;QD=14.46;ReadPosRankSum=-1.317;VQSLOD=2.1474;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:29:62.87:0,63,600	1/1:5,0:5:12.42:62,12,0	0/0:10,0:5:3:0,3,31	./.	1/1:17,0:16:36.08:337,36,0	1/1:16,0:17:18.05:198,18,0	1/1:15,0:14:33.85:325,34,0	1/1:19,0:18:49.17:462,49,0	1/1:10,0:11:16.59:167,17,0	0/0:17,0:16:38.92:0,39,372	0/0:6,0:5:11.91:0,12,108	1/1:11,0:11:14.99:157,15,0	1/1:6,0:6:9.86:93,10,0	1/1:6,0:6:11.98:122,12,0	1/1:14,0:14:18.04:120,18,0	0/0:16,0:14:29.92:0,30,282	1/1:26,0:25:39.32:180,39,0	0/0:27,0:26:44.86:0,45,432	1/1:14,0:11:28.89:234,29,0	1/1:9,0:12:18.53:151,19,0	1/1:19,0:18:24.72:324,25,0	1/1:7,0:7:16.97:141,17,0	1/1:6,0:6:8.24:76,8,0	1/1:19,0:18:42.40:408,42,0	0/0:9,0:9:20.97:0,21,199	1/1:14,0:12:32.20:307,32,0	1/1:5,18:25:17.47:128,17,0	1/1:10,0:9:9.30:71,9,0
chr10	90609148	.	GGATTA	G	18478.03	PASS	AB=0.510;AC=33;AF=0.589;AN=56;BaseQRankSum=15.927;DP=573;FS=0.000;HRun=0;HaplotypeScore=117.4887;InbreedingCoeff=0.9263;MQ=75.76;MQ0=0;MQRankSum=-6.954;QD=51.47;ReadPosRankSum=2.286;VQSLOD=5.1572;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,3171	0/0:9,0:9:27.09:0,27,856	0/0:21,0:21:60.19:0,60,1712	0/0:9,0:9:27.03:0,27,685	1/1:0,25:23:45.15:976,45,0	1/1:0,18:18:48.16:1041,48,0	1/1:0,21:21:60.21:1296,60,0	1/1:1,31:32:90.10:1560,90,0	1/1:0,21:21:51.17:1079,51,0	0/0:23,0:23:69.22:0,69,2043	0/0:12,0:12:36.12:0,36,1127	1/1:1,24:25:60.21:1300,60,0	1/1:1,12:13:33.11:713,33,0	1/1:0,22:22:54.19:1168,54,0	0/0:20,0:20:60.17:0,60,1667	0/0:18,0:18:54.17:0,54,1585	0/0:22,0:22:66.23:0,66,2046	0/0:21,0:21:63.22:0,63,1947	1/1:1,17:18:51.13:1021,51,0	1/1:0,21:20:45.15:975,45,0	1/1:2,25:27:57.15:1189,57,0	1/1:0,21:21:57.20:1236,57,0	1/1:1,11:12:27.09:586,27,0	1/1:1,19:20:39.13:846,39,0	0/0:22,0:22:63.22:0,63,1986	0/1:1,24:25:20.01:1348,0,20	1/1:1,28:29:72.25:1562,72,0	1/1:0,9:9:27.09:583,27,0
chr10	90609463	.	G	GTC	12712.08	PASS	AB=0.611;AC=35;AF=0.625;AN=56;BaseQRankSum=-10.480;DP=790;FS=3.561;HRun=0;HaplotypeScore=99.3673;InbreedingCoeff=0.6327;MQ=68.33;MQ0=9;MQRankSum=-1.087;QD=25.17;ReadPosRankSum=3.460;VQSLOD=5.7289;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:46:60.39:0,60,1150	1/1:4,0:12:12.13:127,12,0	0/0:54,0:39:30.50:0,30,368	0/0:65,0:36:35.86:0,36,413	0/1:9,18:27:51.33:714,0,51	1/1:2,24:24:51.17:819,51,0	1/1:7,21:29:7.29:589,7,0	1/1:24,17:40:17.97:736,18,0	1/1:5,21:27:11.73:686,12,0	0/0:33,0:33:75.20:0,75,889	0/0:17,0:17:33.10:0,33,398	1/1:0,19:19:45.15:723,45,0	0/1:13,12:25:18.15:711,0,18	0/1:7,14:21:0.06:494,0,0	1/1:10,1:31:48:444,48,0	0/0:31,0:31:66.20:0,66,795	1/1:4,3:30:56.76:530,57,0	0/0:17,0:20:33.09:0,33,516	1/1:2,16:18:48.10:716,48,0	1/1:11,16:28:39.13:626,39,0	0/1:11,30:41:98.97:979,0,99	1/1:8,17:25:42.14:674,42,0	1/1:3,6:8:18.06:289,18,0	0/1:9,18:26:47.43:533,0,47	0/0:18,0:18:45.14:0,45,543	1/1:9,21:30:30.04:974,30,0	1/1:4,25:29:57.19:915,57,0	1/1:0,9:9:27.09:433,27,0
chr10	90611422	.	TGG	T	1512.32	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.367;DP=659;FS=12.141;HRun=3;HaplotypeScore=81.9519;InbreedingCoeff=0.9844;MQ=78.26;MQ0=0;MQRankSum=-3.351;QD=43.21;ReadPosRankSum=0.927;VQSLOD=2.2512;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:99:1607,105,0	0/0:15,0:15:45.15:0,45,858	0/0:22,0:22:38.66:0,39,924	0/0:25,0:25:48.74:0,49,1131	0/0:25,0:25:75.25:0,75,1415	0/0:22,0:22:66.21:0,66,1242	0/0:22,0:22:66.18:0,66,1237	0/0:31,0:31:90.29:0,90,1660	0/0:14,0:14:42.13:0,42,770	0/0:31,0:31:87.30:0,87,1673	0/0:35,0:35:93.32:0,93,1783	0/0:14,0:14:42.14:0,42,804	0/0:19,0:19:57.20:0,57,1080	0/0:23,0:23:66.20:0,66,1210	0/0:28,0:28:81.27:0,81,1533	0/0:22,0:22:66.22:0,66,1244	0/0:22,0:22:66.23:0,66,1253	0/0:18,0:18:54.19:0,54,1042	0/0:24,0:24:69.24:0,69,1293	0/0:35,0:35:99:0,102,1909	0/0:24,0:24:72.25:0,72,1390	0/0:20,0:20:57.18:0,57,1054	0/0:30,0:30:83.95:0,84,1547	0/0:20,0:20:60.21:0,60,1159	0/0:23,0:23:66.18:0,66,1233	0/0:29,0:29:81.28:0,81,1543	0/0:25,0:25:75.25:0,75,1406	0/0:5,0:5:15.05:0,15,289
chr10	90611813	.	GGTGTGTGT	G	3918.16	PASS	AC=38;AF=0.704;AN=54;BaseQRankSum=4.394;DP=620;FS=2.666;HRun=0;HaplotypeScore=151.2818;InbreedingCoeff=0.6723;MQ=53.40;MQ0=8;MQRankSum=-3.160;QD=9.77;ReadPosRankSum=2.252;VQSLOD=2.8512;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:5.99:0,6,138	1/1:10,0:10:3.01:70,3,0	./.	0/0:25,0:14:3.01:0,3,35	1/1:11,2:13:3.01:75,3,0	1/1:16,0:16:6.02:147,6,0	1/1:14,8:24:12.35:262,12,0	0/0:29,0:28:2.22:0,2,7	1/1:15,4:19:26.28:494,26,0	0/0:30,0:30:27.09:0,27,847	0/0:16,0:15:15.05:0,15,502	1/1:13,11:24:14.84:374,15,0	1/1:14,2:17:6.02:131,6,0	1/1:26,5:30:21.07:492,21,0	1/1:15,7:23:32.93:687,33,0	0/0:11,0:17:12.04:0,12,360	1/1:22,6:28:5.97:150,6,0	0/0:16,0:20:27.09:0,27,968	1/1:15,0:15:4.33:20,4,0	1/1:14,6:19:9.37:60,9,0	1/1:43,1:44:8.81:117,9,0	1/1:23,0:24:6.02:130,6,0	1/1:9,4:14:8.92:166,9,0	1/1:20,4:25:6.38:92,6,0	0/0:24,0:27:21.38:0,21,659	1/1:24,2:25:6.02:150,6,0	1/1:11,6:17:9.03:225,9,0	1/1:7,3:10:4.26:78,4,0
chr10	90613229	.	G	GT	4478.42	PASS	AB=0.703;AC=27;AF=0.482;AN=56;BaseQRankSum=-6.645;DP=617;FS=0.838;HRun=13;HaplotypeScore=92.9306;InbreedingCoeff=0.2789;MQ=60.42;MQ0=14;MQRankSum=1.047;QD=10.32;ReadPosRankSum=-1.042;VQSLOD=4.1457;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,11:21:27.10:165,0,27	0/0:2,0:5:6.10:0,6,18	0/0:31,0:10:3.09:0,3,22	0/1:26,1:15:6.99:19,0,7	1/1:12,8:20:30.95:313,31,0	1/1:5,20:26:15.92:412,16,0	0/1:14,9:23:32.53:296,0,33	0/1:40,9:46:10.84:422,0,11	1/1:12,1:14:35.11:230,35,0	0/0:11,0:22:29.41:0,29,96	0/0:6,0:16:25.13:0,25,84	1/1:17,6:24:25.48:360,25,0	0/1:5,22:27:5.09:97,0,5	0/1:8,3:11:1.42:149,0,1	0/0:7,0:24:19.73:0,20,72	0/0:18,0:23:11.25:0,11,82	0/0:5,0:24:29.66:0,30,93	0/0:12,0:28:38.97:0,39,126	1/1:20,11:28:16.28:294,16,0	1/1:14,11:26:14.03:365,14,0	0/1:8,11:20:23.27:177,0,23	0/1:5,12:19:2.45:239,0,2	1/1:7,1:11:17.61:187,18,0	0/1:8,18:26:27.53:152,0,28	0/0:2,0:9:10.16:0,10,29	0/1:16,3:16:5.08:170,0,5	1/1:14,9:23:29.83:335,30,0	0/1:3,8:11:5.57:96,0,6
chr10	90615759	.	C	CAATAAATA	1379.40	PASS	AC=22;AF=0.846;AN=26;BaseQRankSum=-1.367;DP=186;FS=2.456;HRun=0;HaplotypeScore=53.7095;InbreedingCoeff=0.3703;MQ=62.12;MQ0=1;MQRankSum=-0.433;QD=13.93;ReadPosRankSum=-0.367;VQSLOD=1.9056;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:3.01:57,3,0	./.	./.	./.	./.	1/1:5,0:5:3.01:67,3,0	./.	1/1:23,0:20:9.03:267,9,0	1/1:5,0:5:3.01:39,3,0	1/1:3,1:4:6.02:190,6,0	./.	./.	./.	1/1:4,0:4:3.01:66,3,0	0/0:7,0:7:5.99:0,6,96	1/1:2,2:4:3.01:123,3,0	0/0:10,0:10:11.69:0,12,185	1/1:11,3:18:6.02:246,6,0	./.	./.	./.	./.	./.	./.	1/1:7,2:10:9.03:335,9,0	./.	1/1:11,0:11:3.01:42,3,0	1/1:2,0:4:5.99:48,6,0
chr10	90615903	.	A	AAAAT	218.27	PASS	AB=0.667;AC=7;AF=0.269;AN=26;BaseQRankSum=-3.020;DP=78;FS=1.399;HRun=0;HaplotypeScore=46.2458;InbreedingCoeff=0.3560;MQ=97.99;MQ0=10;MQRankSum=-0.735;QD=19.84;ReadPosRankSum=-0.517;VQSLOD=3.1276;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:4:7.69:0,8,47	0/0:2,0:1:2.96:0,3,19	0/0:23,0:10:16.98:0,17,171	0/0:15,0:8:1.48:0,1,53	0/0:1,0:1:3.01:0,3,33	./.	./.	0/0:3,0:3:4.66:0,5,15	./.	0/1:2,2:4:3.17:145,0,3	./.	./.	./.	0/0:1,0:1:2.92:0,3,17	./.	0/0:1,0:1:2.90:0,3,16	0/0:11,0:10:12.53:0,13,114	1/1:2,1:3:8:94,8,0	./.	./.	1/1:1,0:1:1.82:5,2,0	./.	./.	./.	1/1:2,1:2:3:69,3,0	./.	./.	./.
chr10	90616100	.	ATCTT	A	856.28	PASS	AB=0.875;AC=24;AF=0.750;AN=32;BaseQRankSum=5.379;DP=91;FS=38.850;HRun=0;HaplotypeScore=50.7249;InbreedingCoeff=0.2931;MQ=63.28;MQ0=20;MQRankSum=-0.582;QD=21.96;ReadPosRankSum=3.072;VQSLOD=1.6673;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:2:6.02:94,6,0	1/1:0,1:1:3.01:49,3,0	0/0:27,0:11:32.59:0,33,615	0/0:19,0:7:14.98:0,15,300	./.	1/1:3,0:3:7.83:89,8,0	./.	1/1:4,1:1:3.01:58,3,0	./.	0/0:1,0:1:3.01:0,3,84	./.	1/1:1,1:2:5.98:69,6,0	./.	0/1:2,0:2:23:23,0,77	./.	./.	1/1:3,0:2:6.02:80,6,0	./.	0/1:4,2:4:99:102,0,156	1/1:3,0:2:3.01:31,3,0	./.	1/1:1,0:1:3.01:30,3,0	./.	./.	./.	1/1:2,1:3:9.02:118,9,0	1/1:4,1:5:15.04:202,15,0	1/1:2,0:1:3.01:32,3,0
chr10	90616116	.	ATC	A	2203.93	PASS	AB=0.625;AC=37;AF=0.841;AN=44;BaseQRankSum=3.475;DP=134;FS=38.200;HRun=0;HaplotypeScore=61.6083;InbreedingCoeff=0.2221;MQ=83.08;MQ0=6;MQRankSum=-3.383;QD=29.78;ReadPosRankSum=3.322;VQSLOD=2.5273;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:6.02:82,6,0	1/1:0,1:1:3.01:38,3,0	0/0:31,0:15:30.86:0,31,393	0/0:26,0:13:12.90:0,13,209	./.	1/1:1,2:3:5.79:91,6,0	1/1:0,1:1:3.01:45,3,0	1/1:1,4:4:12.04:182,12,0	1/1:0,1:1:3.01:45,3,0	0/1:1,0:4:26.56:88,0,27	1/1:1,0:7:18.05:203,18,0	1/1:0,3:3:9.03:131,9,0	./.	0/1:1,1:2:11.98:40,0,12	./.	1/1:3,0:6:12.03:127,12,0	1/1:1,6:7:18.06:261,18,0	1/1:0,0:3:6.02:67,6,0	0/1:3,4:6:80.44:164,0,80	1/1:1,1:2:3.01:46,3,0	./.	1/1:0,1:1:3.01:46,3,0	./.	./.	1/1:2,0:6:18.04:190,18,0	1/1:0,4:4:12.04:182,12,0	1/1:1,5:6:18.06:264,18,0	1/1:1,1:1:3.01:46,3,0
chr10	90616117	.	TCTAAA	T	1296.21	PASS	AB=1.000;AC=37;AF=0.841;AN=44;BaseQRankSum=4.187;DP=134;FS=27.488;HRun=0;HaplotypeScore=72.3309;InbreedingCoeff=0.2615;MQ=85.92;MQ0=6;MQRankSum=-1.888;QD=17.76;ReadPosRankSum=2.485;VQSLOD=1.4426;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:2.75:56,3,0	1/1:1,0:1:3.01:30,3,0	0/0:32,0:15:29.30:0,29,462	0/0:27,0:14:21.63:0,22,301	./.	1/1:3,0:3:0.23:42,0,0	1/1:1,0:1:2.50:9,2,0	1/1:5,0:4:11.43:86,11,0	1/1:1,0:1:2.99:24,3,0	0/1:4,0:4:28.17:29,0,28	1/1:6,1:7:20.96:290,21,0	1/1:3,0:3:8.49:65,8,0	./.	0/1:2,0:2:3.85:4,0,13	./.	1/1:3,3:6:8.80:106,9,0	1/1:7,0:7:13.89:113,14,0	1/1:3,0:3:6.01:71,6,0	0/1:6,0:6:81.46:85,0,81	1/1:2,0:2:2.50:9,2,0	./.	1/1:1,0:1:2.50:9,2,0	./.	./.	1/1:4,2:6:18.01:233,18,0	1/1:4,0:4:10.88:72,11,0	1/1:5,0:6:13.52:82,14,0	1/1:2,0:1:2.60:10,3,0
chr10	90616148	.	T	TAA	3095.75	PASS	AB=0.728;AC=40;AF=0.714;AN=56;BaseQRankSum=-2.516;DP=257;FS=4.618;HRun=12;HaplotypeScore=78.1177;InbreedingCoeff=0.6319;MQ=69.83;MQ0=1;MQRankSum=-2.227;QD=18.54;ReadPosRankSum=-0.455;VQSLOD=2.8970;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:9:7.01:7,0,166	1/1:0,0:3:4.99:17,5,0	0/0:19,0:16:13.09:0,13,110	0/0:24,0:12:7.91:0,8,49	1/1:1,6:8:21.03:272,21,0	1/1:1,9:11:21.07:294,21,0	1/1:0,4:4:12.04:168,12,0	1/1:15,11:25:40.75:499,41,0	1/1:1,3:3:9.03:126,9,0	0/0:8,0:8:8.66:0,9,67	0/0:11,0:11:19.96:0,20,179	1/1:3,5:8:18.02:230,18,0	1/1:1,0:2:5.46:29,5,0	1/1:1,5:6:17.92:210,18,0	0/1:1,0:5:9.32:9,0,20	0/0:8,0:9:14.71:0,15,121	1/1:6,0:23:8.69:111,9,0	0/0:5,0:5:2.90:0,3,28	1/1:5,6:12:20.56:259,21,0	1/1:3,2:5:6.02:83,6,0	1/1:1,1:2:5.97:61,6,0	1/1:0,1:1:3.01:42,3,0	1/1:2,3:4:9.03:126,9,0	1/1:0,1:1:3.01:42,3,0	0/0:13,0:13:26.94:0,27,250	1/1:5,5:10:15.05:209,15,0	1/1:3,5:9:18.01:210,18,0	1/1:4,9:12:21.06:276,21,0
chr10	90616702	.	TA	T	912.62	PASS	AB=0.583;AC=9;AF=0.563;AN=16;BaseQRankSum=3.497;DP=102;FS=10.851;HRun=11;HaplotypeScore=31.7653;MQ=51.86;MQ0=11;MQRankSum=2.585;QD=17.22;ReadPosRankSum=-0.624;VQSLOD=3.1836;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:16:35.54:0,36,247	./.	./.	./.	0/0:2,0:5:0:0,0,0	./.	./.	0/0:5,0:2:0:0,0,0	./.	1/1:0,15:15:44.45:353,44,0	0/1:2,5:7:4.58:105,0,5	./.	./.	./.	./.	1/1:2,2:4:5.98:49,6,0	./.	1/1:4,12:13:29.97:246,30,0	./.	./.	./.	./.	./.	./.	1/1:0,11:11:29.97:246,30,0	./.	./.	./.
chr10	90617137	.	T	TACACACAC	14334.74	PASS	AB=0.958;AC=40;AF=0.714;AN=56;BaseQRankSum=3.866;DP=850;FS=0.431;HRun=0;HaplotypeScore=233.1070;InbreedingCoeff=0.3439;MQ=49.90;MQ0=9;MQRankSum=-9.246;QD=20.99;ReadPosRankSum=-1.540;VQSLOD=3.8963;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:99:132,0,243	0/0:18,0:18:25.19:0,25,798	0/0:55,0:22:48.06:0,48,754	0/0:59,0:26:46.09:0,46,596	1/1:12,17:31:12.78:557,13,0	1/1:6,12:20:21.54:812,22,0	1/1:4,30:40:12.04:351,12,0	1/1:36,0:36:57.05:1056,57,0	1/1:13,28:51:41.28:1950,41,0	0/1:25,0:25:99:119,0,284	0/1:16,0:15:89.68:118,0,90	1/1:10,19:31:34.17:1335,34,0	1/1:11,22:37:42.14:1476,42,0	1/1:11,18:31:18.06:614,18,0	0/1:33,0:33:7.88:8,0,888	0/1:36,0:36:99:679,0,217	0/0:35,0:34:45.97:0,46,1092	0/1:15,0:15:99:205,0,143	1/1:9,0:17:35.70:519,36,0	1/1:10,3:28:18.03:566,18,0	0/1:21,2:42:0.09:1,0,0	1/1:6,17:26:12.04:441,12,0	1/1:5,9:16:12.04:492,12,0	1/1:9,14:23:0.94:2,1,0	0/1:21,0:21:63.27:63,0,143	1/1:16,18:39:56.24:1237,56,0	1/1:7,13:28:33.58:1166,34,0	1/1:2,2:7:20.98:436,21,0
chr10	90617142	.	ACG	A	1637.43	PASS	AB=0.987;AC=19;AF=0.339;AN=56;BaseQRankSum=-6.695;DP=802;FS=6.836;HRun=0;HaplotypeScore=195.1463;InbreedingCoeff=-0.3606;MQ=46.76;MQ0=10;MQRankSum=5.851;QD=3.23;ReadPosRankSum=-5.270;VQSLOD=0.6605;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:12.98:0,13,168	0/1:17,2:19:99:110,0,210	0/0:53,0:20:34.89:0,35,509	0/0:58,0:25:10.46:0,10,340	0/1:27,0:27:30.47:66,0,30	0/1:22,0:21:42.86:86,0,43	0/0:38,0:38:0.84:0,1,63	0/1:37,0:36:99:361,0,108	0/1:46,0:46:10.78:11,0,133	0/0:23,0:22:54.49:0,54,440	0/0:14,0:13:13.39:0,13,72	0/1:32,0:32:68.26:88,0,68	0/1:35,0:35:70.77:71,0,85	0/1:31,0:31:8.72:9,0,39	0/1:31,2:33:99:208,0,289	0/0:35,0:35:26.19:0,26,257	0/1:33,3:35:99:205,0,308	0/0:14,0:14:3.76:0,4,107	0/1:16,0:16:11.77:154,0,12	0/1:25,0:25:6.19:6,0,37	1/1:33,0:33:13.42:109,13,0	0/1:22,0:22:12.50:12,0,21	0/0:14,0:14:15.35:0,15,60	0/1:26,0:26:17.30:39,0,17	0/0:20,0:20:20.36:0,20,140	0/1:34,0:34:70.98:225,0,71	0/1:25,0:25:8.37:8,0,109	0/1:8,0:8:12.27:29,0,12
chr10	90617144	.	G	GCACACACACACACA	13439.15	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-0.682;DP=831;FS=1.785;HRun=0;HaplotypeScore=285.4116;InbreedingCoeff=0.6684;MQ=46.24;MQ0=10;MQRankSum=-7.436;QD=19.42;ReadPosRankSum=-3.221;VQSLOD=3.2321;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:39:5.45:236,5,0	0/0:18,0:18:23.22:0,23,1367	0/0:52,0:20:5.18:0,5,164	0/1:55,0:22:3.29:3,0,58	1/1:28,0:28:15.29:382,15,0	1/1:23,0:22:26.89:523,27,0	1/1:37,0:37:14.39:290,14,0	1/1:36,0:35:53.99:968,54,0	1/1:45,0:46:45.69:1221,46,0	1/1:7,0:27:40.64:1479,41,0	1/1:4,9:17:6.02:277,6,0	1/1:32,0:32:50.63:965,51,0	1/1:36,0:36:57.03:980,57,0	1/1:29,0:29:24.04:431,24,0	0/0:32,0:32:11.15:0,11,1438	1/1:8,19:39:27.03:1402,27,0	0/0:37,0:36:4.66:0,5,1672	1/1:8,0:19:5.68:285,6,0	1/1:14,0:14:32.95:567,33,0	1/1:25,0:25:15.05:356,15,0	1/1:32,0:32:7.99:62,8,0	1/1:20,0:20:11.83:280,12,0	1/1:15,0:15:12.04:291,12,0	1/1:28,0:28:5.99:50,6,0	1/1:7,12:25:3.01:181,3,0	1/1:35,0:35:74.98:1202,75,0	1/1:24,0:24:40.91:740,41,0	1/1:9,0:9:18.89:268,19,0
chr10	90617788	.	A	AAAAT	18282.18	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-11.619;DP=553;FS=2.641;HRun=0;HaplotypeScore=84.1094;InbreedingCoeff=0.9693;MQ=74.79;MQ0=2;MQRankSum=-3.652;QD=52.54;ReadPosRankSum=3.121;VQSLOD=5.6023;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.27:0,90,1532	1/1:5,5:10:15.05:305,15,0	0/0:28,0:21:18.52:0,19,398	0/0:20,0:15:20.32:0,20,241	1/1:4,28:33:81.28:1998,81,0	1/1:1,17:17:48.16:1208,48,0	1/1:4,6:10:21.07:496,21,0	1/1:12,8:20:42.14:947,42,0	1/1:4,7:11:27.09:613,27,0	0/0:26,0:26:72.24:0,72,1240	0/0:31,0:31:87.26:0,87,1473	1/1:3,6:9:21.07:519,21,0	1/1:2,12:15:39.13:970,39,0	1/1:6,13:19:39.13:977,39,0	1/1:5,18:24:51.18:1304,51,0	0/0:19,0:19:54.18:0,54,947	1/1:12,22:33:60.20:1535,60,0	0/0:24,0:24:63.18:0,63,1064	1/1:6,7:15:33.06:666,33,0	1/1:4,18:23:57.19:1396,57,0	1/1:2,6:8:18.06:424,18,0	1/1:5,5:10:15.05:343,15,0	1/1:3,17:20:48.64:1227,49,0	1/1:2,7:9:18.06:461,18,0	0/0:23,0:23:60.19:0,60,1028	1/1:9,17:25:7.09:1221,7,0	1/1:5,20:26:54.18:1367,54,0	1/1:2,5:7:12.04:307,12,0
chr10	90618407	.	A	AAAG	2180.47	PASS	AB=0.926;AC=29;AF=0.518;AN=56;BaseQRankSum=3.699;DP=573;FS=14.890;HRun=0;HaplotypeScore=77.6963;InbreedingCoeff=0.0359;MQ=61.15;MQ0=13;MQRankSum=-1.147;QD=5.68;ReadPosRankSum=6.029;VQSLOD=0.4879;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:91.22:0,91,702	0/1:2,9:13:7.80:181,0,8	0/0:50,0:14:16.56:0,17,158	0/1:25,0:7:13.82:14,0,34	0/1:22,1:23:97.41:117,0,97	1/1:13,0:13:11.91:128,12,0	1/1:17,0:17:7.88:71,8,0	0/1:20,0:20:99:109,0,113	0/1:12,0:12:4.94:80,0,5	0/0:23,0:22:62.42:0,62,471	0/0:17,0:17:41.15:0,41,334	1/1:22,1:23:5.89:78,6,0	0/1:16,0:16:23.82:154,0,24	0/1:19,0:19:5.92:6,0,44	1/1:6,7:17:11.13:199,11,0	0/0:14,0:14:38.23:0,38,296	0/1:9,2:35:12.52:204,0,13	0/0:31,0:31:74.39:0,74,616	0/1:22,0:22:67.28:159,0,67	1/1:19,0:19:2.17:158,2,0	1/1:6,2:11:2.01:90,2,0	1/1:9,0:9:6.91:110,7,0	1/1:18,0:17:5.62:176,6,0	0/1:24,0:24:17.20:81,0,17	0/0:13,0:13:26.47:0,26,217	0/1:24,1:24:99:178,0,120	0/1:18,0:17:37.07:37,0,55	0/1:5,0:4:0.93:28,0,1
chr10	90618969	.	CGTGTGT	C	2603.72	PASS	AB=0.909;AC=13;AF=0.232;AN=56;BaseQRankSum=-1.458;DP=754;FS=1.975;HRun=0;HaplotypeScore=194.6700;InbreedingCoeff=0.8029;MQ=70.63;MQ0=5;MQRankSum=-7.060;QD=13.15;ReadPosRankSum=0.321;VQSLOD=3.0584;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,12:42:15.05:285,15,0	0/0:4,0:5:8.06:0,8,150	0/0:28,0:20:3.01:0,3,45	0/0:37,0:28:12.01:0,12,191	0/0:19,0:21:2.74:0,3,391	0/0:15,0:18:35.96:0,36,648	0/0:35,0:34:57.13:0,57,1232	0/0:28,0:28:18.96:0,19,378	0/0:26,0:31:48.09:0,48,941	1/1:18,13:32:36.75:743,37,0	1/1:9,11:24:21.04:372,21,0	0/0:28,0:28:48.11:0,48,1133	0/0:22,0:26:33.11:0,33,789	0/0:29,0:35:72.13:0,72,1469	0/0:26,0:27:24.08:0,24,607	1/1:9,16:28:45.09:859,45,0	0/0:37,0:35:50.16:0,50,1096	1/1:12,9:23:15.92:290,16,0	0/0:18,0:18:15.50:0,16,311	0/0:12,0:14:24.03:0,24,562	0/0:40,0:45:57.11:0,57,1301	0/0:17,0:21:47.80:0,48,1118	0/0:17,0:18:36.06:0,36,688	0/0:37,0:40:66.15:0,66,1525	1/1:12,5:18:12.04:207,12,0	0/1:27,2:30:31.92:32,0,556	0/0:23,0:25:48.10:0,48,1073	0/0:11,0:15:23.14:0,23,590
chr10	90619004	.	G	GTGTA	4704.74	PASS	AB=0.953;AC=22;AF=0.393;AN=56;BaseQRankSum=-4.605;DP=793;FS=69.571;HRun=0;HaplotypeScore=190.5430;InbreedingCoeff=-0.3930;MQ=55.50;MQ0=18;MQRankSum=2.283;QD=8.74;ReadPosRankSum=-5.659;VQSLOD=-0.0804;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:71.81:0,72,606	1/1:2,4:7:1.17:3,1,0	0/0:45,0:6:6.42:0,6,43	0/0:52,0:11:17.78:0,18,148	0/1:9,0:24:8.16:8,0,82	0/1:23,0:23:77.93:158,0,78	0/1:40,0:38:99:391,0,213	0/1:21,0:21:71.24:305,0,71	0/1:29,0:29:99:275,0,170	0/0:25,0:25:62.92:0,63,593	0/0:26,0:26:47.97:0,48,455	0/1:32,0:31:99:261,0,271	0/1:23,0:23:99:184,0,187	0/1:37,0:38:99:263,0,351	1/1:4,29:34:19.31:464,19,0	0/0:26,0:26:63.07:0,63,667	0/1:12,26:40:17.71:591,0,18	0/0:25,0:25:50.83:0,51,459	0/1:17,0:17:39.96:248,0,40	0/1:13,0:13:67.15:67,0,145	0/1:47,0:48:99:512,0,248	0/1:24,0:23:86.84:87,0,304	0/1:18,0:18:99:101,0,137	0/1:41,0:40:99:299,0,334	0/0:15,0:14:29.99:0,30,287	0/1:26,0:26:99:324,0,125	0/1:26,0:26:99:147,0,259	0/1:12,0:12:15.66:16,0,144
chr10	90620426	.	CCTCA	C	24908.67	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.752;DP=624;FS=0.640;HRun=0;HaplotypeScore=143.3747;InbreedingCoeff=0.9474;MQ=81.64;MQ0=1;MQRankSum=-9.997;QD=43.02;ReadPosRankSum=6.561;VQSLOD=4.8316;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,35:37:83.83:1540,84,0	1/1:0,11:11:30.10:552,30,0	0/0:23,0:23:57.19:0,57,1282	0/0:22,0:22:50.81:0,51,1037	1/1:4,25:29:33.11:606,33,0	1/1:0,14:14:42.14:766,42,0	1/1:1,30:31:72.25:1324,72,0	1/1:4,20:24:57.20:1032,57,0	1/1:0,21:21:51.17:938,51,0	1/1:3,22:25:63.19:1083,63,0	1/1:1,19:20:51.17:938,51,0	1/1:0,19:19:51.17:938,51,0	1/1:0,16:16:45.15:828,45,0	1/1:2,23:25:57.20:1048,57,0	1/1:0,24:23:63.22:1156,63,0	1/1:3,21:24:60.16:1069,60,0	1/1:4,28:32:63.22:1159,63,0	1/1:0,13:13:33.11:607,33,0	1/1:4,13:17:39.13:701,39,0	1/1:3,21:24:60.15:1049,60,0	1/1:4,22:26:51.13:903,51,0	1/1:3,26:29:66.18:1178,66,0	1/1:2,11:13:27.09:497,27,0	1/1:2,21:23:60.21:1104,60,0	1/1:1,16:17:36.12:662,36,0	1/1:2,28:30:87.23:1520,87,0	1/1:1,31:32:87.30:1600,87,0	1/1:1,2:3:6.02:110,6,0
chr10	90621280	.	T	TAAA	478.61	PASS	AB=0.935;AC=4;AF=0.154;AN=26;BaseQRankSum=4.440;DP=53;FS=7.832;HRun=0;HaplotypeScore=27.7575;InbreedingCoeff=0.0197;MQ=84.91;MQ0=0;MQRankSum=-2.814;QD=14.96;ReadPosRankSum=0.963;VQSLOD=1.5515;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:1:3.01:0,3,56	./.	0/1:4,0:4:0.18:2,0,0	0/0:3,0:3:6.02:0,6,74	0/0:1,0:1:3.01:0,3,56	0/0:2,0:2:6.02:0,6,101	./.	0/1:13,7:20:99:546,0,370	./.	./.	./.	./.	./.	./.	./.	0/1:1,0:1:0:0,0,0	0/0:4,0:4:12.04:0,12,174	0/1:7,0:7:3.66:4,0,261	0/0:1,0:1:3.01:0,3,56	0/0:1,0:1:3.01:0,3,56	./.	./.	./.	./.	0/0:2,0:2:6.02:0,6,106	./.	./.	0/0:6,0:4:12.04:0,12,206
chr10	90622311	.	GA	G	5423.24	PASS	AB=0.568;AC=33;AF=0.589;AN=56;BaseQRankSum=3.930;DP=506;FS=1.698;HRun=11;HaplotypeScore=55.1183;InbreedingCoeff=0.9118;MQ=62.82;MQ0=14;MQRankSum=0.582;QD=18.64;ReadPosRankSum=-0.261;VQSLOD=5.7389;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:30:80.87:0,81,823	0/0:8,0:8:18.05:0,18,192	0/0:27,0:12:19.30:0,19,185	0/0:17,1:4:9.02:0,9,92	1/1:4,15:18:44.14:351,44,0	1/1:3,16:19:38.95:320,39,0	1/1:1,14:15:10.01:288,10,0	1/1:3,17:19:24.54:367,25,0	1/1:0,14:14:38.96:320,39,0	0/0:16,1:18:23.57:0,24,447	0/0:15,0:15:36.09:0,36,383	1/1:1,13:14:29.95:246,30,0	1/1:1,10:11:26.97:222,27,0	1/1:5,10:14:26.96:222,27,0	0/0:13,0:13:30.08:0,30,320	0/0:16,0:16:42.08:0,42,433	0/0:28,0:29:77.86:0,78,784	0/0:28,0:27:40.18:0,40,576	0/1:5,16:21:10.06:339,0,10	1/1:4,14:17:35.94:296,36,0	1/1:2,10:12:32.96:271,33,0	1/1:4,14:17:38.93:320,39,0	1/1:3,12:13:29.95:246,30,0	1/1:0,17:17:47.95:394,48,0	0/0:12,0:13:29.89:0,30,290	1/1:2,19:21:21.94:387,22,0	1/1:5,13:19:14.98:318,15,0	1/1:2,21:23:62.90:516,63,0
chr10	90622849	.	C	CA	3965.10	PASS	AB=0.736;AC=38;AF=0.679;AN=56;BaseQRankSum=-3.521;DP=529;FS=5.853;HRun=13;HaplotypeScore=69.9027;InbreedingCoeff=0.4804;MQ=59.49;MQ0=7;MQRankSum=-0.921;QD=9.89;ReadPosRankSum=-1.320;VQSLOD=2.6692;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:30:32.34:0,32,349	1/1:1,5:7:11.85:98,12,0	0/0:18,0:9:5.12:0,5,42	0/1:14,0:9:11.83:12,0,63	1/1:6,13:20:14.68:240,15,0	0/1:4,11:15:2.56:121,0,3	1/1:10,15:25:15.40:276,15,0	1/1:12,17:29:32.14:316,32,0	1/1:5,10:15:21.02:195,21,0	0/0:30,0:29:53.32:0,53,368	0/0:18,1:20:11.49:0,11,201	1/1:3,5:8:3.89:30,4,0	0/1:9,3:14:1.51:152,0,2	1/1:7,12:19:1.64:141,2,0	0/1:6,14:20:5.12:243,0,5	0/0:10,0:10:20.31:0,20,133	1/1:8,22:30:16.44:263,16,0	0/0:14,0:15:29.39:0,29,205	1/1:4,10:14:14.46:210,14,0	1/1:11,7:18:6.33:180,6,0	1/1:7,10:17:3.12:157,3,0	0/1:8,12:20:19.77:255,0,20	1/1:7,8:15:18.94:161,19,0	1/1:6,19:25:18.46:314,18,0	0/1:14,5:20:3.17:3,0,123	1/1:9,19:29:30.99:377,31,0	1/1:4,12:16:12.01:111,12,0	1/1:0,7:7:12.01:111,12,0
chr10	90623070	.	G	GTT	1347.64	PASS	AB=0.758;AC=15;AF=0.268;AN=56;BaseQRankSum=-9.413;DP=564;FS=1.020;HRun=14;HaplotypeScore=124.8155;InbreedingCoeff=0.5826;MQ=71.37;MQ0=4;MQRankSum=0.476;QD=6.77;ReadPosRankSum=-3.749;VQSLOD=0.2297;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:29:56.05:0,56,435	1/1:1,0:9:9.61:34,10,0	0/1:41,0:19:4.64:5,0,68	0/0:29,0:15:4.65:0,5,33	0/0:25,0:25:52.70:0,53,418	0/0:14,0:14:41.79:0,42,332	0/0:20,0:20:38.20:0,38,315	0/0:24,0:24:49.89:0,50,414	0/0:14,0:14:24.78:0,25,202	1/1:7,15:25:41.43:472,41,0	1/1:7,7:18:34.38:313,34,0	0/0:11,0:11:20.27:0,20,161	0/1:21,0:21:4.79:5,0,260	0/0:20,0:20:44.21:0,44,365	1/1:5,2:17:0.45:122,0,0	0/1:3,4:15:0.26:166,0,0	0/1:7,0:23:11.25:44,0,11	0/1:5,5:12:5.19:154,0,5	0/0:28,0:28:61.69:0,62,516	0/0:18,0:18:29.34:0,29,249	0/0:16,0:16:38.35:0,38,323	0/0:9,0:9:20.67:0,21,174	0/0:16,0:16:29.04:0,29,248	0/0:20,0:20:34.77:0,35,298	1/1:4,10:17:17.42:205,17,0	0/0:26,0:26:58.64:0,59,486	0/0:23,0:23:53.10:0,53,439	0/0:22,0:22:62.82:0,63,523
chr10	90623072	.	T	TG	1273.85	PASS	AB=0.987;AC=23;AF=0.411;AN=56;BaseQRankSum=5.961;DP=571;FS=77.216;HRun=0;HaplotypeScore=115.7633;InbreedingCoeff=0.1324;MQ=71.95;MQ0=4;MQRankSum=0.622;QD=3.87;ReadPosRankSum=1.190;VQSLOD=-0.0757;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.03:0,81,922	0/0:10,0:10:3.82:0,4,59	0/0:43,0:21:26.03:0,26,231	0/0:30,0:15:24.98:0,25,148	1/1:24,0:24:16.09:139,16,0	1/1:14,0:14:10.33:19,10,0	0/1:18,0:18:19.95:60,0,20	0/1:22,0:22:9.28:81,0,9	0/1:14,1:15:9.52:106,0,10	0/0:28,0:28:64.51:0,65,442	0/0:20,0:19:23.82:0,24,122	0/1:10,0:10:5.22:32,0,5	1/1:20,1:21:0.34:172,0,0	0/1:21,0:21:69.92:73,0,70	0/0:17,0:17:29.13:0,29,183	0/0:15,0:15:19.99:0,20,127	0/0:23,0:23:14.86:0,15,164	0/0:12,0:12:27.61:0,28,188	0/1:28,0:28:32.66:134,0,33	0/1:18,0:18:9.69:40,0,10	1/1:17,0:17:0.04:49,0,0	0/1:10,0:10:3.75:39,0,4	1/1:16,0:16:13.15:138,13,0	0/1:23,0:23:43.36:105,0,43	0/0:17,0:17:26.83:0,27,210	1/1:27,0:27:1.65:163,2,0	0/1:21,2:23:18.68:76,0,19	0/1:22,0:22:4.10:19,0,4
chr10	90623526	.	T	TA	3125.76	PASS	AB=0.909;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.840;DP=617;FS=0.778;HRun=11;HaplotypeScore=85.2713;InbreedingCoeff=0.8675;MQ=62.56;MQ0=10;MQRankSum=-0.006;QD=16.99;ReadPosRankSum=-2.062;VQSLOD=3.6855;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,1:43:59.59:0,60,736	0/0:5,0:5:14.93:0,15,114	0/0:18,0:10:2.83:0,3,75	0/0:17,0:11:16.94:0,17,119	0/0:23,1:24:32.23:0,32,425	0/0:21,0:22:52.83:0,53,400	0/0:20,0:20:33.68:0,34,284	1/1:10,21:24:30.85:479,31,0	0/0:18,0:18:41.80:0,42,323	0/0:24,0:24:27.14:0,27,368	0/0:25,0:25:56.24:0,56,426	0/0:15,0:15:26.49:0,26,223	0/0:10,1:11:2.42:0,2,199	0/0:13,0:13:29.03:0,29,216	0/0:25,0:25:59.76:0,60,464	0/0:15,0:15:35.77:0,36,277	0/0:22,0:26:65.88:0,66,482	0/0:28,0:33:88.44:0,88,642	1/1:7,14:19:31.05:329,31,0	1/1:5,25:31:68.97:684,69,0	1/1:1,15:16:24.05:243,24,0	0/1:9,1:10:3.54:4,0,159	0/0:25,0:25:56.75:0,57,438	0/0:32,0:32:77.65:0,78,604	0/0:18,0:19:52.84:0,53,400	1/1:6,21:27:22.76:572,23,0	1/1:4,25:29:45.88:637,46,0	1/1:3,15:18:18.87:373,19,0
chr10	90623639	.	C	CCACACCTGCATG	12191.59	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-2.696;DP=588;FS=13.958;HRun=0;HaplotypeScore=173.7075;InbreedingCoeff=0.8250;MQ=70.20;MQ0=2;MQRankSum=-4.912;QD=33.96;ReadPosRankSum=-0.733;VQSLOD=3.4269;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:93.28:0,93,2479	0/0:6,0:6:9.03:0,9,181	0/0:24,0:21:50.19:0,50,807	0/0:28,0:28:14.26:0,14,668	1/1:12,0:12:18.06:384,18,0	1/1:4,14:20:9.03:352,9,0	1/1:25,0:25:60.21:1344,60,0	1/1:22,0:22:47.82:933,48,0	1/1:3,8:16:6.02:330,6,0	0/0:27,0:27:57.18:0,57,1599	0/0:7,0:7:12.04:0,12,314	1/1:5,7:18:2.72:179,3,0	1/1:3,12:17:2.95:179,3,0	1/1:3,12:17:3.01:162,3,0	0/0:8,0:8:21.07:0,21,611	0/0:11,0:11:33.11:0,33,952	0/0:27,0:27:66.20:0,66,1725	0/0:16,0:16:36.12:0,36,1032	1/1:18,0:16:33.11:786,33,0	1/1:3,9:19:20.66:453,21,0	1/1:49,0:49:68.19:1695,68,0	1/1:1,9:16:1.86:85,2,0	0/0:0,11:15:0:0,0,0	1/1:9,15:37:9.03:406,9,0	0/0:21,0:21:51.17:0,51,1334	1/1:31,0:31:72.24:1942,72,0	1/1:21,0:21:57.14:1484,57,0	1/1:20,0:20:51.17:1477,51,0
chr10	90624050	.	G	GA	5653.88	PASS	AB=0.800;AC=34;AF=0.607;AN=56;BaseQRankSum=-7.119;DP=508;FS=0.809;HRun=10;HaplotypeScore=46.9525;InbreedingCoeff=0.6702;MQ=65.11;MQ0=6;MQRankSum=0.266;QD=17.56;ReadPosRankSum=0.835;VQSLOD=5.1401;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:31:8.10:0,8,475	0/1:7,0:7:15.80:16,0,83	0/0:12,0:7:3.29:0,3,70	0/1:14,0:9:16.17:16,0,121	1/1:3,19:22:50.88:494,51,0	1/1:5,18:22:48.12:508,48,0	1/1:2,16:18:8.69:351,9,0	1/1:5,19:22:57.03:566,57,0	1/1:3,12:15:27.06:283,27,0	0/0:24,0:24:59.93:0,60,492	0/0:14,0:13:29.95:0,30,246	0/1:4,9:13:6.47:142,0,6	1/1:2,11:13:18.05:192,18,0	1/1:2,8:10:15.04:160,15,0	0/0:18,1:19:2.99:0,3,217	0/0:9,0:9:26.95:0,27,218	0/0:43,0:43:99:0,110,909	0/0:20,0:20:39.85:0,40,383	0/1:5,9:12:0.54:199,0,1	1/1:1,12:15:35.71:331,36,0	1/1:3,14:17:24.06:256,24,0	1/1:3,12:14:33.08:352,33,0	1/1:2,17:20:38.99:398,39,0	1/1:2,18:19:44.98:462,45,0	0/0:13,0:13:32.94:0,33,268	1/1:7,21:28:18.61:569,19,0	1/1:6,8:14:21.04:218,21,0	1/1:2,15:16:14.83:141,15,0
chr10	90624462	.	G	GT	2785.15	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=6.265;DP=629;FS=10.476;HRun=9;HaplotypeScore=132.4696;InbreedingCoeff=0.6490;MQ=63.93;MQ0=4;MQRankSum=-8.880;QD=6.88;ReadPosRankSum=0.152;VQSLOD=0.5574;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:36:37.67:0,38,135	1/1:3,9:12:24.06:266,24,0	0/1:46,0:25:19.60:20,0,215	0/0:46,0:27:11.06:0,11,191	1/1:30,0:29:7.15:171,7,0	1/1:17,0:18:21.26:112,21,0	1/1:16,0:16:13.99:65,14,0	0/0:21,0:21:8.69:0,9,93	1/1:17,0:17:23.94:109,24,0	0/0:35,0:35:99:0,105,911	0/0:25,0:25:62.97:0,63,543	1/1:15,0:15:15.71:77,16,0	1/1:14,0:14:21.14:96,21,0	1/1:15,0:15:8.39:39,8,0	1/1:4,22:26:43.13:704,43,0	0/0:18,0:18:40.72:0,41,430	1/1:0,23:23:51.14:564,51,0	0/0:20,0:20:32.98:0,33,396	0/1:25,0:25:11.10:11,0,107	0/1:13,0:13:10.17:53,0,10	1/1:18,0:17:16.43:72,16,0	1/1:24,0:24:32.34:174,32,0	1/1:18,0:18:21.23:111,21,0	1/1:13,0:13:13.28:55,13,0	0/0:23,0:23:65.99:0,66,573	0/1:30,0:30:49.31:110,0,49	1/1:28,0:28:27.98:131,28,0	1/1:4,0:4:11.19:52,11,0
chr10	90624466	.	T	TTTTTG	13479.81	PASS	AB=0.974;AC=36;AF=0.643;AN=56;BaseQRankSum=-3.786;DP=662;FS=1.120;HRun=0;HaplotypeScore=136.4970;InbreedingCoeff=0.8098;MQ=63.82;MQ0=4;MQRankSum=-7.297;QD=33.45;ReadPosRankSum=-2.759;VQSLOD=3.8498;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:36:99:100,0,600	0/0:12,0:12:23.40:0,23,149	0/0:48,0:26:36.75:0,37,515	0/0:46,0:27:6.24:0,6,356	1/1:4,26:31:78.19:1725,78,0	1/1:3,17:20:30.09:816,30,0	1/1:0,15:15:15.05:437,15,0	1/1:4,16:21:50.82:628,51,0	1/1:1,18:21:27.09:787,27,0	0/0:37,0:37:99:0,111,1720	0/0:22,0:22:63.21:0,63,1091	1/1:4,13:18:20.96:541,21,0	1/1:1,14:15:27.09:787,27,0	1/1:1,13:15:9.03:262,9,0	0/0:26,0:26:70.27:0,70,469	0/1:17,1:18:33.75:34,0,850	0/0:23,0:23:49.93:0,50,326	0/0:21,0:21:36.40:0,36,731	1/1:10,21:32:42.46:1003,42,0	1/1:2,13:15:30.07:611,30,0	1/1:4,16:20:18.05:409,18,0	1/1:1,23:26:59.97:1388,60,0	1/1:0,17:18:29.66:813,30,0	1/1:6,8:16:16.77:372,17,0	0/0:23,0:23:69.22:0,69,1201	1/1:2,25:29:75.18:1539,75,0	1/1:1,28:30:30.10:877,30,0	1/1:0,4:4:12.04:351,12,0
chr10	90625428	.	AT	A	829.57	PASS	AB=0.733;AC=28;AF=0.538;AN=52;BaseQRankSum=2.401;DP=273;FS=32.747;HRun=10;HaplotypeScore=22.6631;InbreedingCoeff=0.6001;MQ=56.55;MQ0=9;MQRankSum=0.276;QD=6.01;ReadPosRankSum=-0.613;VQSLOD=-0.6326;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,2:27:53.95:0,54,563	0/0:6,0:6:10.58:0,11,104	0/0:12,0:5:6.02:0,6,66	0/0:7,0:3:3.01:0,3,33	1/1:5,12:9:0.38:112,0,0	1/1:2,9:3:2.99:26,3,0	./.	1/1:6,16:8:5.97:52,6,0	1/1:1,5:2:6:52,6,0	0/0:9,0:8:18.05:0,18,199	0/0:8,0:8:14.87:0,15,147	1/1:0,4:1:3:26,3,0	0/1:3,1:4:17.47:20,0,17	1/1:4,4:7:14.99:130,15,0	0/0:13,0:13:24.06:0,24,265	0/0:6,0:6:12.03:0,12,133	0/0:13,0:13:39.06:0,39,415	0/0:17,0:17:42.06:0,42,442	1/1:2,11:7:17.03:136,17,0	1/1:6,12:11:14.98:130,15,0	1/1:1,0:1:3:26,3,0	./.	0/1:3,3:5:9.03:43,0,9	1/1:0,2:2:6:52,6,0	0/0:8,0:8:15.93:0,16,168	1/1:5,10:7:8.99:78,9,0	1/1:2,2:2:6:52,6,0	1/1:1,5:4:9:78,9,0
chr10	90625486	.	C	CA	4339.18	PASS	AB=0.533;AC=31;AF=0.620;AN=50;BaseQRankSum=3.316;DP=320;FS=31.557;HRun=1;HaplotypeScore=34.0756;InbreedingCoeff=0.7654;MQ=30.90;MQ0=43;MQRankSum=-6.826;QD=24.94;ReadPosRankSum=-2.962;VQSLOD=2.4327;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:25:54.16:0,54,734	0/0:1,0:1:3.01:0,3,42	./.	./.	1/1:2,16:12:27.09:430,27,0	1/1:1,12:8:12.04:191,12,0	1/1:3,5:4:6.02:96,6,0	1/1:6,15:15:45.11:687,45,0	1/1:1,9:7:6.02:96,6,0	0/0:15,0:14:36.12:0,36,502	0/0:5,0:5:9.03:0,9,125	1/1:0,10:8:18.06:287,18,0	1/1:0,4:4:9.03:143,9,0	1/1:0,8:7:12.04:191,12,0	0/0:10,0:10:18.06:0,18,251	0/0:11,0:10:21.07:0,21,292	0/0:24,0:19:30.10:0,30,418	0/0:25,0:17:39.13:0,39,544	1/1:1,14:13:39.13:623,39,0	1/1:1,17:11:21.07:335,21,0	1/1:0,2:2:6.02:96,6,0	1/1:1,7:8:15.05:239,15,0	1/1:0,11:10:21.07:334,21,0	./.	0/0:9,0:9:12.03:0,12,168	0/1:2,14:10:11.83:401,0,12	1/1:1,6:6:9.03:144,9,0	1/1:2,3:3:3.01:48,3,0
chr10	90626531	.	T	TA	5823.55	PASS	AB=0.562;AC=32;AF=0.571;AN=56;BaseQRankSum=13.999;DP=415;FS=12.817;HRun=0;HaplotypeScore=62.6486;InbreedingCoeff=0.8518;MQ=62.17;MQ0=1;MQRankSum=-0.480;QD=25.88;ReadPosRankSum=-0.864;VQSLOD=4.4005;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:87.18:0,87,1209	0/0:11,0:11:33.11:0,33,461	0/0:11,0:8:16.92:0,17,225	0/0:4,0:2:3.01:0,3,42	1/1:3,14:17:30.15:464,30,0	1/1:3,9:10:25.33:303,25,0	1/1:1,10:11:29.97:308,30,0	1/1:5,17:21:42.75:481,43,0	1/1:0,9:9:27.08:303,27,0	0/0:24,0:23:69.22:0,69,949	0/0:12,0:12:36.12:0,36,503	1/1:1,8:9:19.95:231,20,0	1/1:0,10:10:21.02:231,21,0	1/1:1,7:7:21.06:230,21,0	0/0:15,0:15:42.12:0,42,555	0/0:21,0:21:63.20:0,63,851	0/0:22,0:22:60.18:0,60,800	0/0:24,0:24:56.63:0,57,742	1/1:3,13:16:24.54:424,25,0	1/1:0,14:14:42.12:462,42,0	1/1:1,9:9:24.07:267,24,0	0/1:1,4:5:1.94:101,0,2	1/1:2,6:8:21.06:232,21,0	1/1:0,12:12:36.05:388,36,0	0/0:14,0:14:42.14:0,42,587	0/1:7,22:25:56.42:596,0,56	1/1:4,15:18:24.11:411,24,0	1/1:0,13:13:36.10:392,36,0
chr10	90626787	.	GA	G	7414.87	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.238;DP=466;FS=7.418;HRun=3;HaplotypeScore=66.3879;InbreedingCoeff=0.8297;MQ=89.75;MQ0=0;MQRankSum=-7.066;QD=17.82;ReadPosRankSum=4.331;VQSLOD=4.1053;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:53.78:415,54,0	1/1:0,9:9:18.06:221,18,0	0/0:27,0:27:50.38:0,50,572	0/0:23,0:19:20.52:0,21,282	1/1:1,13:14:25.95:218,26,0	1/1:4,16:20:21.02:230,21,0	1/1:6,19:25:35.97:357,36,0	1/1:3,20:23:65.81:564,66,0	1/1:0,21:21:30.09:369,30,0	1/1:13,0:14:38.57:282,39,0	1/1:10,0:10:20.93:162,21,0	1/1:1,10:11:2.83:24,3,0	1/1:0,9:9:17.97:197,18,0	1/1:3,10:13:30.06:337,30,0	1/1:1,20:21:36.07:415,36,0	1/1:18,0:18:32.85:254,33,0	1/1:5,18:22:45.08:503,45,0	1/1:15,0:15:41.85:324,42,0	1/1:1,11:12:32.85:308,33,0	1/1:8,2:10:17.71:129,18,0	1/1:4,16:20:30.52:342,31,0	1/1:4,4:8:12.39:155,12,0	1/1:0,6:6:6.02:71,6,0	1/1:3,24:27:33.04:358,33,0	1/1:13,0:14:38.71:287,39,0	1/1:0,16:16:47.94:465,48,0	1/1:2,15:17:29.95:297,30,0	1/1:1,7:8:12:132,12,0
chr10	90626789	.	AAC	A	5414.48	PASS	AB=0.905;AC=48;AF=0.857;AN=56;BaseQRankSum=-1.277;DP=476;FS=0.581;HRun=0;HaplotypeScore=81.4177;InbreedingCoeff=0.3445;MQ=89.31;MQ0=0;MQRankSum=-6.513;QD=12.77;ReadPosRankSum=7.150;VQSLOD=4.3445;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:31:54.08:521,54,0	1/1:9,0:9:10.64:29,11,0	0/0:29,0:28:70.23:0,70,772	0/0:23,0:19:23.06:0,23,358	1/1:13,0:14:19.99:90,20,0	1/1:20,1:21:11.63:70,12,0	0/1:22,6:28:11.33:234,0,11	1/1:20,2:22:41.34:438,41,0	1/1:21,0:21:18.17:50,18,0	1/1:3,9:14:38.77:447,39,0	1/1:0,9:10:21.07:335,21,0	0/1:12,0:12:17.94:18,0,20	1/1:9,0:9:10.66:37,11,0	1/1:11,2:13:18.74:131,19,0	1/1:22,1:23:3.29:97,3,0	1/1:0,15:16:33.10:506,33,0	1/1:20,3:23:27.37:195,27,0	1/1:0,15:15:42.14:669,42,0	1/1:12,1:13:25.72:181,26,0	1/1:3,7:10:16.54:121,17,0	1/1:16,3:19:20.92:136,21,0	0/1:7,1:8:16.77:74,0,17	1/1:7,0:7:2.63:7,3,0	0/1:27,3:30:29.74:150,0,30	1/1:1,13:14:39.13:606,39,0	1/1:16,0:16:11.58:105,12,0	1/1:15,2:17:8.56:129,9,0	1/1:7,1:8:9.11:39,9,0
chr10	90627211	.	GTCTCTC	G	2164.54	PASS	AB=1.000;AC=35;AF=0.700;AN=50;BaseQRankSum=0.126;DP=569;FS=18.279;HRun=0;HaplotypeScore=131.9090;InbreedingCoeff=0.1083;MQ=74.87;MQ0=12;MQRankSum=3.671;QD=6.08;ReadPosRankSum=2.889;VQSLOD=1.1181;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:8.66:0,9,217	1/1:9,0:9:9.03:171,9,0	./.	./.	0/0:13,4:17:0:0,0,0	0/0:27,0:27:3:0,3,26	0/1:21,0:21:35.04:45,0,35	0/0:40,0:38:2.98:0,3,21	1/1:11,0:11:6.02:120,6,0	0/1:26,0:25:2.47:2,0,281	0/1:9,0:8:0.71:1,0,44	1/1:8,0:9:5.60:99,6,0	1/1:14,0:15:12.03:161,12,0	1/1:19,1:21:20.90:196,21,0	1/1:19,0:18:9.09:212,9,0	1/1:21,0:22:15.94:301,16,0	0/1:20,0:19:16.42:392,0,16	1/1:8,0:10:2.97:20,3,0	1/1:16,0:16:11.91:137,12,0	1/1:14,0:14:2.98:22,3,0	0/1:20,0:20:16.43:44,0,16	./.	1/1:12,1:13:0.32:19,0,0	0/1:25,0:24:14.52:39,0,15	1/1:13,0:12:3.01:52,3,0	0/1:32,0:32:15.19:152,0,15	1/1:14,0:14:8.97:85,9,0	1/1:14,1:13:3.01:35,3,0
chr10	90627248	.	T	TCTCACACA	184.09	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=-2.520;DP=498;FS=0.951;HRun=0;HaplotypeScore=133.1304;InbreedingCoeff=-0.0820;MQ=42.24;MQ0=31;MQRankSum=0.247;QD=1.04;ReadPosRankSum=-2.698;VQSLOD=1.2977;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:23:8.88:0,9,218	0/1:7,0:7:7.37:7,0,19	./.	0/0:18,0:4:3.01:0,3,62	0/0:10,0:9:2.87:0,3,48	0/0:23,0:22:18.53:0,19,391	0/0:20,0:18:4.87:0,5,112	0/0:22,0:19:9.07:0,9,656	0/1:16,0:15:21.95:22,0,187	0/1:18,0:14:25.75:26,0,535	0/0:7,2:9:9.03:0,9,219	0/1:15,0:14:27.25:27,0,115	0/1:23,0:24:14.16:14,0,351	0/1:24,0:22:12.10:12,0,427	0/1:25,0:24:75.92:76,0,97	0/0:11,3:19:17.72:0,18,184	0/1:24,0:23:37.80:38,0,339	1/1:7,0:4:8.66:95,9,0	0/0:15,0:14:30.56:0,31,501	0/0:18,0:18:8.28:0,8,193	0/0:17,0:17:8.88:0,9,144	0/0:15,0:14:0:0,0,0	0/0:25,0:23:6.02:0,6,129	0/0:24,0:21:21.03:0,21,385	0/0:10,0:9:2.45:0,2,9	0/0:30,0:29:69.25:0,69,1142	0/1:17,0:17:3.45:3,0,354	0/0:6,0:5:12.04:0,12,254
chr10	90627250	.	TCTCTCTCACA	T	2210.77	PASS	AB=0.952;AC=25;AF=0.446;AN=56;BaseQRankSum=-2.686;DP=494;FS=52.242;HRun=0;HaplotypeScore=129.1033;InbreedingCoeff=-0.2529;MQ=43.02;MQ0=31;MQRankSum=0.760;QD=6.14;ReadPosRankSum=1.794;VQSLOD=0.0203;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:23:8.50:0,8,234	0/1:7,0:7:35.92:159,0,36	0/0:9,0:2:5.85:0,6,71	0/0:23,0:5:7.74:0,8,100	0/0:11,0:10:1.82:0,2,6	0/0:17,5:20:9.32:0,9,65	0/1:21,0:19:35.99:45,0,36	0/1:23,0:21:41.24:142,0,41	1/1:16,0:15:12:166,12,0	0/0:17,0:13:1.51:0,2,540	0/0:11,0:9:1.42:0,1,132	1/1:15,1:15:5.63:137,6,0	0/1:25,0:25:20.91:214,0,21	1/1:21,1:20:15.84:174,16,0	0/1:22,0:21:99:168,0,222	0/1:19,0:17:99:274,0,134	0/1:23,0:22:99:197,0,419	0/1:7,0:4:14.11:14,0,34	0/1:16,0:15:64.16:166,0,64	0/1:10,0:18:7.09:12,0,7	0/1:16,0:16:16.37:44,0,16	0/0:15,0:14:0:0,0,0	1/1:25,0:23:0.34:23,0,0	0/1:16,8:21:25.52:37,0,26	1/1:9,0:8:3.01:52,3,0	0/1:28,0:27:99:192,0,105	0/1:17,0:17:2.10:93,0,2	0/1:4,1:4:21.78:55,0,22
chr10	90627252	.	TCTCTCACA	T	2302.69	PASS	AB=0.974;AC=28;AF=0.500;AN=56;BaseQRankSum=-4.570;DP=500;FS=54.650;HRun=0;HaplotypeScore=122.5580;InbreedingCoeff=-0.1508;MQ=42.99;MQ0=32;MQRankSum=0.253;QD=5.83;ReadPosRankSum=1.229;VQSLOD=0.1348;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:23:8.57:0,9,144	0/1:7,0:7:35.93:91,0,36	0/0:14,0:2:5.85:0,6,71	0/0:23,0:5:7.74:0,8,100	0/0:12,0:11:3.85:0,4,12	0/0:22,1:21:11.08:0,11,42	0/1:22,0:20:11.65:121,0,12	1/1:23,0:21:18.79:200,19,0	1/1:16,0:15:12:118,12,0	0/1:17,0:13:4.08:4,0,284	0/1:11,0:9:22.26:22,0,70	0/1:18,0:17:4.38:102,0,4	0/1:25,0:25:17.84:198,0,18	1/1:22,0:20:18.09:300,18,0	0/1:21,0:20:99:109,0,212	0/1:19,0:17:95.97:153,0,96	0/1:22,0:21:99:130,0,387	0/0:7,0:4:2.76:0,3,39	0/1:16,0:15:8.98:184,0,9	0/1:18,0:18:7.19:26,0,7	1/1:17,0:17:5.75:89,6,0	0/1:10,6:15:0.02:0,0,0	1/1:26,0:23:5.97:88,6,0	0/1:23,0:21:8.69:98,0,9	1/1:9,0:8:3.01:34,3,0	0/1:24,1:24:54.79:238,0,55	0/1:15,1:16:5.59:133,0,6	0/1:5,0:4:21.78:24,0,22
chr10	90627256	.	T	TCACACACA	1161.75	PASS	AB=0.821;AC=18;AF=0.333;AN=54;BaseQRankSum=-5.652;DP=554;FS=3.299;HRun=0;HaplotypeScore=142.9728;InbreedingCoeff=0.6175;MQ=42.37;MQ0=34;MQRankSum=-0.546;QD=6.05;ReadPosRankSum=-1.147;VQSLOD=2.6382;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,9:31:0:0,0,0	1/1:7,0:7:3.01:53,3,0	0/0:21,0:2:3.01:0,3,75	0/0:33,0:6:1.69:0,2,35	0/0:12,0:11:6.01:0,6,101	0/0:23,0:21:21.54:0,22,459	0/1:22,0:20:0:0,0,0	0/0:22,0:20:17.75:0,18,169	0/0:16,0:15:8.16:0,8,180	1/1:21,0:17:15.52:414,16,0	1/1:17,0:15:6:71,6,0	0/0:18,0:17:6.49:0,6,104	0/0:23,0:24:15.01:0,15,238	0/0:22,0:20:2.99:0,3,75	1/1:21,0:20:7.09:160,7,0	1/1:23,0:21:6.23:149,6,0	1/1:26,0:25:12.38:284,12,0	1/1:9,0:6:6.02:164,6,0	0/0:17,0:16:10.28:0,10,196	0/0:19,0:19:8.99:0,9,222	./.	0/0:17,0:15:0:0,0,0	0/0:25,0:23:0:0,0,0	0/0:25,0:22:17.08:0,17,367	1/1:12,0:11:2.99:24,3,0	0/0:26,0:25:18.07:0,18,841	0/0:18,0:18:11.36:0,11,163	0/0:5,0:4:12.03:0,12,253
chr10	90627279	.	CACACACAG	C	827.07	PASS	AB=0.988;AC=18;AF=0.333;AN=54;BaseQRankSum=4.231;DP=637;FS=2.010;HRun=0;HaplotypeScore=158.0866;InbreedingCoeff=-0.0323;MQ=56.21;MQ0=33;MQRankSum=-1.559;QD=2.34;ReadPosRankSum=-0.822;VQSLOD=2.6429;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:38:32.87:0,33,351	0/0:5,0:5:12:0,12,193	0/0:48,0:15:8.65:0,9,342	0/1:66,0:22:2.54:3,0,352	0/1:14,0:13:1.94:21,0,2	0/1:24,0:22:7:11,0,7	0/0:21,2:21:3.71:0,4,22	0/1:28,2:30:57.20:386,0,57	0/1:19,0:18:31.58:42,0,32	0/0:19,0:17:45.12:0,45,1021	0/0:19,0:16:24.05:0,24,557	0/1:20,1:21:53.86:54,0,56	0/1:25,0:25:99:131,0,105	0/1:14,0:14:2.67:3,0,3	0/0:24,0:24:41.96:0,42,950	0/0:19,0:17:23.99:0,24,530	0/0:24,0:23:52.13:0,52,1466	0/1:9,0:6:9.81:10,0,383	0/1:20,0:18:81.48:110,0,81	1/1:24,0:24:3.44:41,3,0	./.	1/1:19,0:17:6.82:32,7,0	1/1:23,0:21:2.74:12,3,0	0/0:22,0:20:0.18:0,0,19	0/0:14,0:14:23.95:0,24,385	0/1:23,1:23:69.40:69,0,229	0/1:22,0:22:52.58:53,0,93	0/0:7,0:6:3.88:0,4,69
chr10	90627281	.	CACACAG	C	1627.32	PASS	AB=0.958;AC=23;AF=0.442;AN=52;BaseQRankSum=7.848;DP=624;FS=7.982;HRun=0;HaplotypeScore=142.9451;InbreedingCoeff=0.3190;MQ=56.67;MQ0=32;MQRankSum=0.516;QD=5.77;ReadPosRankSum=3.908;VQSLOD=1.6289;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:37:35.60:0,36,328	0/0:5,0:5:12:0,12,169	0/0:49,0:15:2.29:0,2,269	0/0:68,0:24:0.32:0,0,292	1/1:10,0:9:11.17:67,11,0	1/1:20,1:19:10.51:134,11,0	0/0:21,1:21:1:0,1,3	1/1:25,4:29:18.89:526,19,0	0/1:17,2:18:5.64:65,0,6	0/0:20,0:18:48.12:0,48,842	0/0:20,0:17:27.01:0,27,428	0/1:21,1:22:10.28:61,0,10	0/1:23,2:25:29.21:127,0,29	1/1:11,2:13:1.68:24,2,0	0/0:24,0:24:42.04:0,42,768	0/0:20,0:18:25.51:0,26,413	0/0:24,0:23:54.07:0,54,1182	0/1:9,0:6:8.41:8,0,298	1/1:19,0:17:6.45:177,6,0	1/1:22,1:23:17.38:112,17,0	./.	1/1:18,1:17:6.85:32,7,0	./.	1/1:21,1:20:20.11:140,20,0	0/0:14,0:14:23.95:0,24,335	0/1:22,0:21:99:208,0,101	0/1:20,2:22:45.98:81,0,46	0/1:7,0:6:30.82:38,0,31
chr10	90627283	.	CACAG	C	980.70	PASS	AB=0.965;AC=22;AF=0.423;AN=52;BaseQRankSum=5.118;DP=611;FS=1.213;HRun=0;HaplotypeScore=135.6623;InbreedingCoeff=0.1647;MQ=59.25;MQ0=31;MQRankSum=-0.841;QD=2.97;ReadPosRankSum=0.565;VQSLOD=2.6877;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:35.60:0,36,305	0/0:4,0:4:12:0,12,145	0/1:51,0:16:0.22:0,0,224	0/0:71,0:25:6.04:0,6,244	1/1:9,0:8:4.76:33,5,0	0/1:20,1:19:6.20:6,0,16	1/1:21,1:21:2.71:17,3,0	1/1:26,0:26:20.94:404,21,0	1/1:16,0:15:1.87:56,2,0	0/0:21,0:19:45.10:0,45,627	0/0:23,0:20:33.47:0,33,387	0/1:20,0:20:26.50:56,0,26	0/1:24,0:24:24.64:123,0,25	0/1:13,0:13:0.74:1,0,5	0/0:24,0:24:42.04:0,42,596	0/0:21,0:19:29.94:0,30,385	0/0:25,0:24:51.42:0,51,849	0/0:8,0:6:11.79:0,12,226	0/1:10,8:16:20.93:174,0,21	1/1:23,0:23:2.12:37,2,0	./.	1/1:17,0:15:6.84:32,7,0	./.	0/1:22,0:20:5.83:6,0,10	0/0:15,0:15:26.94:0,27,311	0/1:20,0:19:98.98:99,0,130	0/1:21,0:21:8.95:67,0,9	0/1:7,0:6:26.21:26,0,48
chr10	90627284	.	A	AGT	2222.54	PASS	AB=0.885;AC=24;AF=0.462;AN=52;BaseQRankSum=7.877;DP=612;FS=38.965;HRun=0;HaplotypeScore=131.6233;InbreedingCoeff=0.3903;MQ=61.03;MQ0=31;MQRankSum=3.535;QD=5.86;ReadPosRankSum=5.131;VQSLOD=1.5715;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:38.88:0,39,559	0/0:4,0:4:12.02:0,12,158	0/1:52,0:17:19.75:20,0,322	0/1:73,0:27:8.19:8,0,346	1/1:9,0:8:15.03:186,15,0	1/1:20,0:18:23.89:214,24,0	0/0:22,0:21:2.50:0,2,32	0/1:27,0:27:26.11:334,0,26	0/1:4,11:15:1.17:53,0,1	0/0:20,0:19:46.94:0,47,557	0/0:21,0:18:22.95:0,23,332	0/1:19,1:20:3.64:46,0,4	1/1:7,16:24:11.87:190,12,0	1/1:13,0:13:11.90:130,12,0	0/0:25,0:25:42.09:0,42,560	0/0:21,0:19:30.07:0,30,403	0/0:25,0:24:48.55:0,49,590	0/0:8,0:6:17.84:0,18,205	0/1:18,0:16:99:214,0,127	1/1:22,0:22:18.48:209,18,0	./.	1/1:15,0:13:8.80:124,9,0	./.	1/1:22,0:20:1.51:147,2,0	0/0:15,0:15:29.82:0,30,395	1/1:4,15:18:19.63:409,20,0	0/1:5,16:21:30.80:60,0,31	0/1:7,0:6:2.37:62,0,2
chr10	90627288	.	AGT	A	134.28	PASS	AB=0.970;AC=13;AF=0.250;AN=52;BaseQRankSum=4.959;DP=629;FS=8.733;HRun=0;HaplotypeScore=139.1647;InbreedingCoeff=0.2173;MQ=61.81;MQ0=26;MQRankSum=-5.258;QD=0.65;ReadPosRankSum=-2.948;VQSLOD=1.4079;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:40.35:0,40,607	0/0:4,0:4:12.04:0,12,205	0/0:58,0:19:23.36:0,23,386	0/0:76,0:29:1.71:0,2,339	0/0:9,0:8:6.92:0,7,22	0/1:21,2:21:5.23:5,0,17	0/0:19,0:19:0.47:0,0,1	1/1:33,0:32:14.98:57,15,0	0/1:19,0:18:4.01:21,0,4	0/0:19,0:18:51.16:0,51,851	0/0:21,0:19:38.95:0,39,594	0/1:20,1:21:2.53:12,0,3	0/1:24,1:25:12.18:24,0,12	0/0:14,0:14:4.62:0,5,19	0/0:22,0:22:48.15:0,48,793	0/0:19,0:18:30.10:0,30,496	0/0:23,0:22:48.71:0,49,787	0/0:8,0:7:9.05:0,9,300	0/1:20,0:19:14.15:46,0,14	0/0:24,0:24:5.61:0,6,16	./.	1/1:17,0:15:0.97:22,1,0	./.	0/0:22,0:21:5.70:0,6,24	0/0:12,0:12:26.88:0,27,410	0/1:20,1:21:36.65:37,0,84	1/1:19,1:20:5.87:35,6,0	0/1:8,0:7:19.11:19,0,25
chr10	90627291	.	G	GAGAGAC	6472.21	PASS	AB=1.000;AC=29;AF=0.558;AN=52;BaseQRankSum=5.982;DP=649;FS=12.641;HRun=0;HaplotypeScore=150.4078;InbreedingCoeff=0.8368;MQ=61.94;MQ0=20;MQRankSum=-3.899;QD=21.08;ReadPosRankSum=3.095;VQSLOD=4.0583;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:42.04:0,42,890	0/0:4,0:4:12.04:0,12,264	0/0:61,0:23:23.59:0,24,452	0/0:77,0:31:32.50:0,32,535	1/1:10,0:9:15.05:404,15,0	1/1:24,0:22:29.70:507,30,0	1/1:5,17:22:0.94:1,1,0	1/1:33,0:32:74.97:1519,75,0	1/1:18,0:18:11.32:119,11,0	0/0:21,0:20:51.04:0,51,939	0/0:25,0:23:45.13:0,45,875	1/1:25,0:25:8.84:120,9,0	1/1:25,0:25:20.63:350,21,0	1/1:14,0:14:12.04:319,12,0	0/0:21,0:21:48.14:0,48,942	0/0:19,0:18:30:0,30,657	0/0:23,0:23:53.17:0,53,1017	0/0:7,0:7:13.63:0,14,357	1/1:19,0:18:42:789,42,0	1/1:26,0:26:21.54:483,22,0	./.	1/1:19,0:17:15.02:339,15,0	./.	1/1:21,0:21:24.92:414,25,0	0/0:11,0:11:27.09:0,27,595	0/1:22,0:22:8.99:895,0,9	1/1:21,0:21:5.79:94,6,0	1/1:6,0:7:4.37:119,4,0
chr10	90627292	.	A	ACA	2967.97	PASS	AB=1.000;AC=24;AF=0.462;AN=52;BaseQRankSum=8.054;DP=655;FS=21.109;HRun=0;HaplotypeScore=133.4152;InbreedingCoeff=0.6901;MQ=61.93;MQ0=19;MQRankSum=-0.947;QD=10.27;ReadPosRankSum=3.338;VQSLOD=1.6907;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:42.14:0,42,643	0/0:4,0:4:12.04:0,12,184	0/0:59,0:24:23.65:0,24,532	0/0:78,0:31:29.48:0,29,504	1/1:12,0:11:15.03:189,15,0	1/1:24,0:22:29.89:268,30,0	0/0:22,0:22:2.76:0,3,34	0/1:34,0:33:2.19:485,0,2	0/1:18,0:18:7.15:75,0,7	0/0:20,0:20:51.17:0,51,777	0/0:25,0:23:45.13:0,45,638	1/1:14,10:25:5.93:85,6,0	1/1:25,0:25:19.15:258,19,0	1/1:14,0:14:12.02:144,12,0	0/0:21,0:21:48.16:0,48,734	0/0:19,0:18:29.71:0,30,458	0/0:23,0:23:51.15:0,51,757	0/0:7,0:7:19.31:0,19,278	0/1:19,0:18:99:329,0,118	1/1:26,0:26:21.03:262,21,0	./.	1/1:20,0:18:14.88:182,15,0	./.	1/1:21,0:21:25.99:217,26,0	0/0:11,0:11:27.09:0,27,413	1/1:22,0:22:13.20:501,13,0	0/1:21,0:21:3.12:64,0,3	1/1:8,0:7:11.38:107,11,0
chr10	90627591	.	C	CA	961	PASS	AB=0.773;AC=13;AF=0.591;AN=22;BaseQRankSum=-2.882;DP=242;FS=2.956;HRun=13;HaplotypeScore=94.5580;InbreedingCoeff=-0.0729;MQ=39.84;MQ0=15;MQRankSum=1.819;QD=5.22;ReadPosRankSum=0.351;VQSLOD=2.6427;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:39,1:37:34.33:51,0,34	1/1:9,0:9:3.24:6,3,0	1/1:12,0:2:1.55:4,2,0	./.	./.	./.	./.	0/0:3,0:1:2.98:0,3,21	./.	1/1:8,19:27:33.37:419,33,0	1/1:14,9:25:7.41:306,7,0	./.	./.	./.	0/1:22,0:22:1.78:13,0,2	0/1:13,7:20:10.21:10,0,132	0/0:26,0:24:4.86:0,5,62	0/1:3,8:11:22.96:93,0,23	./.	./.	./.	./.	./.	./.	0/1:4,10:15:14.17:154,0,14	./.	./.	./.
chr10	90627603	.	AAC	A	1406.71	PASS	AB=1.000;AC=11;AF=0.367;AN=30;BaseQRankSum=5.673;DP=279;FS=0.600;HRun=0;HaplotypeScore=87.7268;InbreedingCoeff=0.6703;MQ=40.83;MQ0=16;MQRankSum=-4.585;QD=10.66;ReadPosRankSum=-1.352;VQSLOD=2.8203;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:44,0:41:43.48:474,43,0	1/1:10,1:11:26.36:187,26,0	0/1:15,0:4:11.70:12,0,15	0/0:28,0:6:14.99:0,15,129	./.	./.	./.	0/0:6,0:4:3.01:0,3,32	./.	0/0:28,0:28:14.86:0,15,358	0/0:25,0:24:25.07:0,25,412	./.	./.	./.	1/1:20,4:24:59.18:485,59,0	0/0:18,0:18:32.71:0,33,370	1/1:28,3:29:15.34:362,15,0	0/0:15,0:13:13.77:0,14,170	1/1:7,0:4:2.70:15,3,0	./.	0/0:2,0:2:0:0,0,0	./.	./.	0/0:2,0:2:0.89:0,1,2	0/0:15,0:15:16.60:0,17,202	./.	./.	./.
chr10	90627604	.	AC	A	2012.07	PASS	AB=1.000;AC=11;AF=0.367;AN=30;BaseQRankSum=6.305;DP=277;FS=1.917;HRun=1;HaplotypeScore=77.5657;InbreedingCoeff=0.6521;MQ=41.56;MQ0=14;MQRankSum=-2.656;QD=14.69;ReadPosRankSum=-1.235;VQSLOD=2.8754;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,10:41:72.84:672,73,0	1/1:5,6:11:27.03:293,27,0	0/1:17,0:6:17.88:18,0,48	0/0:28,0:6:14.99:0,15,128	./.	./.	./.	0/0:6,0:4:9.12:0,9,51	./.	0/0:27,0:27:24.64:0,25,307	0/0:24,0:23:19.84:0,20,261	./.	./.	./.	1/1:17,7:24:58.45:558,58,0	0/0:16,0:16:31.39:0,31,298	1/1:24,8:30:65.89:598,66,0	0/0:16,0:14:15.53:0,16,123	0/1:7,0:4:3.75:4,0,8	./.	0/0:2,0:2:2:0,2,6	./.	./.	0/1:2,0:2:0:0,0,0	0/0:15,0:15:26.70:0,27,178	./.	./.	./.
chr10	90627630	.	CA	C	1436.37	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.366;DP=488;FS=10.768;HRun=4;HaplotypeScore=70.5030;InbreedingCoeff=0.9600;MQ=62.20;MQ0=6;MQRankSum=0.079;QD=28.73;ReadPosRankSum=0.738;VQSLOD=2.8616;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:66.22:0,66,898	1/1:1,7:8:21.06:252,21,0	0/0:21,0:18:33.64:0,34,552	0/0:27,0:15:21.06:0,21,486	0/0:15,0:15:39.13:0,39,529	0/0:18,0:17:48.12:0,48,632	0/0:18,0:18:54.17:0,54,737	0/0:19,0:17:45.15:0,45,628	0/0:18,0:18:54.17:0,54,728	0/0:18,0:18:54.18:0,54,755	0/0:21,0:20:57.11:0,57,725	0/0:21,0:20:60.20:0,60,835	0/0:12,0:12:36.10:0,36,484	0/0:11,0:11:30.10:0,30,417	1/1:1,20:21:60.18:717,60,0	0/0:14,0:14:30.02:0,30,376	1/1:1,20:21:51.16:609,51,0	0/0:21,0:19:45.12:0,45,592	0/0:12,0:11:32.94:0,33,433	0/0:18,0:18:51.16:0,51,695	0/0:16,0:16:34.48:0,34,375	0/0:21,0:21:62.42:0,62,844	0/0:13,0:13:36.12:0,36,492	0/0:20,0:20:51.13:0,51,679	0/0:12,0:12:30.10:0,30,419	0/0:21,0:20:60.20:0,60,822	0/0:19,0:19:57.19:0,57,790	0/0:3,0:2:6.02:0,6,84
chr10	90628855	.	AAT	A	2854.83	PASS	AB=0.967;AC=34;AF=0.630;AN=54;BaseQRankSum=8.091;DP=233;FS=5.462;HRun=0;HaplotypeScore=31.4000;InbreedingCoeff=0.7114;MQ=68.48;MQ0=7;MQRankSum=-1.735;QD=20.69;ReadPosRankSum=-1.003;VQSLOD=2.7382;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:42.11:0,42,631	0/0:3,0:3:9.03:0,9,144	0/1:13,1:8:22.52:23,0,172	0/1:19,0:6:5.78:6,0,57	1/1:1,6:7:20.51:246,21,0	1/1:1,14:15:21.07:304,21,0	1/1:0,3:3:9.03:130,9,0	1/1:1,17:17:48.08:583,48,0	1/1:0,4:4:12.04:174,12,0	0/0:8,0:8:24.06:0,24,340	0/0:7,0:7:21.05:0,21,315	1/1:0,3:3:6.02:85,6,0	./.	1/1:1,2:3:6.02:85,6,0	0/0:5,0:5:15.04:0,15,232	0/0:6,0:6:15.05:0,15,241	0/0:26,0:26:78.26:0,78,1315	0/0:18,0:18:51.15:0,51,782	1/1:2,7:8:24.03:280,24,0	1/1:1,4:5:15.02:191,15,0	1/1:1,4:5:9.03:130,9,0	1/1:0,2:2:6.02:84,6,0	1/1:2,2:4:6.02:85,6,0	1/1:1,3:4:6.02:87,6,0	0/0:8,0:8:23.87:0,24,353	1/1:1,9:10:27.09:390,27,0	1/1:1,5:5:9.03:130,9,0	1/1:1,6:7:3.01:43,3,0
chr10	90629018	.	TA	T	3005.65	PASS	AB=0.933;AC=35;AF=0.625;AN=56;BaseQRankSum=6.117;DP=359;FS=1.020;HRun=13;HaplotypeScore=44.1683;InbreedingCoeff=0.8606;MQ=66.85;MQ0=4;MQRankSum=-0.518;QD=13.92;ReadPosRankSum=0.098;VQSLOD=3.8472;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,1:23:44.29:0,44,553	0/0:4,0:5:11.86:0,12,102	0/0:15,0:10:14.98:0,15,135	0/0:18,1:12:9.24:0,9,103	1/1:5,15:20:43.73:309,44,0	1/1:4,16:21:46.77:334,47,0	1/1:2,7:10:22.90:159,23,0	1/1:8,23:32:44.48:438,44,0	1/1:2,13:15:32.80:241,33,0	0/1:13,1:14:3.89:4,0,125	0/0:8,0:8:18.02:0,18,170	1/1:0,4:4:5.97:44,6,0	1/1:0,7:7:20.88:153,21,0	1/1:0,6:6:17.90:131,18,0	0/0:7,0:8:23.87:0,24,219	0/0:13,0:13:33.05:0,33,321	0/0:21,1:23:28.33:0,28,458	0/0:20,0:21:35.78:0,36,315	1/1:3,20:22:56.44:406,56,0	1/1:2,4:7:13.96:93,14,0	1/1:0,3:3:5.97:44,6,0	1/1:1,4:5:11.92:88,12,0	1/1:2,8:10:17.89:131,18,0	1/1:0,2:2:2.98:22,3,0	0/0:8,0:8:15.02:0,15,142	1/1:1,13:15:40.80:289,41,0	1/1:4,10:15:28.86:203,29,0	1/1:0,6:6:17.90:131,18,0
chr10	90630351	.	CT	C	3784.48	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=11.923;DP=416;FS=26.151;HRun=10;HaplotypeScore=116.8294;InbreedingCoeff=0.9396;MQ=55.09;MQ0=8;MQRankSum=-10.409;QD=20.46;ReadPosRankSum=-0.624;VQSLOD=2.2623;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:78.19:0,78,852	0/0:12,0:12:30.08:0,30,332	0/0:13,0:10:23.65:0,24,199	0/0:5,0:4:11.75:0,12,90	1/1:7,22:30:37.79:535,38,0	1/1:2,7:8:20.88:166,21,0	1/1:1,4:4:12:104,12,0	1/1:2,7:7:21:182,21,0	1/1:0,7:7:18:156,18,0	0/0:28,0:27:72.15:0,72,783	0/0:19,0:19:48.06:0,48,514	1/1:0,7:6:15:130,15,0	1/1:1,7:8:20.95:176,21,0	1/1:2,11:12:32.99:284,33,0	0/0:17,0:17:42.05:0,42,449	0/0:14,0:14:36.10:0,36,398	0/0:31,0:31:63.17:0,63,697	0/0:30,0:29:69.17:0,69,753	1/1:2,10:8:24:208,24,0	1/1:3,17:20:50.98:442,51,0	1/1:1,2:3:6:52,6,0	1/1:1,7:7:21:182,21,0	1/1:2,12:14:32.97:286,33,0	1/1:2,3:4:6:52,6,0	0/0:18,0:18:36.07:0,36,379	1/1:1,20:21:59.99:520,60,0	1/1:2,10:12:29.98:257,30,0	1/1:0,2:2:6:52,6,0
chr10	90630365	.	GATTT	G	8015.98	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=11.773;DP=424;FS=38.632;HRun=0;HaplotypeScore=122.7290;InbreedingCoeff=0.6098;MQ=49.81;MQ0=12;MQRankSum=-9.477;QD=26.54;ReadPosRankSum=-1.685;VQSLOD=2.7178;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:60.13:0,60,1394	0/0:12,0:12:30.10:0,30,725	0/0:13,0:8:9.03:0,9,149	0/0:4,0:3:2.98:0,3,21	1/1:3,24:26:65.93:1020,66,0	1/1:4,5:8:18.06:316,18,0	1/1:2,5:6:9.03:159,9,0	1/1:10,13:17:33.04:517,33,0	1/1:3,3:6:9.03:159,9,0	0/1:26,0:25:92.96:306,0,93	0/1:18,0:18:7.82:197,0,8	1/1:2,4:5:11.99:165,12,0	1/1:3,6:9:21.01:296,21,0	1/1:0,11:12:36.12:633,36,0	0/0:16,0:16:33.11:0,33,822	1/1:13,0:13:6.19:206,6,0	0/0:31,0:31:57.19:0,57,1373	0/1:28,0:27:1.95:335,0,2	1/1:6,6:8:15.05:264,15,0	1/1:1,19:20:57.01:905,57,0	1/1:0,1:1:2.92:17,3,0	1/1:5,4:9:11.96:175,12,0	1/1:1,14:15:39.09:640,39,0	1/1:1,3:4:2.97:23,3,0	1/1:17,0:17:32.87:256,33,0	1/1:5,17:22:57.08:878,57,0	1/1:4,8:11:27.09:444,27,0	1/1:2,4:5:6.02:105,6,0
chr10	90630373	.	TATTTA	T	4814.05	PASS	AB=1.000;AC=30;AF=0.577;AN=52;BaseQRankSum=5.984;DP=422;FS=21.721;HRun=0;HaplotypeScore=128.1626;InbreedingCoeff=0.2167;MQ=46.42;MQ0=15;MQRankSum=-7.303;QD=16.54;ReadPosRankSum=2.514;VQSLOD=3.1580;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:54.18:0,54,1604	0/0:14,0:12:33.10:0,33,664	0/0:12,0:5:3.01:0,3,92	./.	0/1:25,0:25:12.04:98,0,12	1/1:8,0:7:13.89:48,14,0	1/1:6,0:5:7.11:25,7,0	0/1:22,0:15:37.27:37,0,146	0/1:7,0:6:8.62:9,0,90	1/1:6,21:26:63.17:1140,63,0	1/1:1,14:15:30.10:620,30,0	0/1:8,0:7:2.76:3,0,93	1/1:8,0:8:9.28:33,9,0	1/1:13,0:12:28.70:100,29,0	0/0:15,0:15:33.06:0,33,725	1/1:2,11:13:30.10:621,30,0	0/0:35,0:35:51.18:0,51,1179	1/1:4,23:26:51.18:1056,51,0	0/1:12,0:8:20.38:20,0,113	1/1:21,0:20:37.93:132,38,0	./.	0/1:5,0:6:14.58:15,0,33	0/1:16,0:16:3.03:59,0,3	0/0:6,0:5:3.01:0,3,44	1/1:1,16:17:33.11:683,33,0	0/1:20,0:21:17.81:75,0,18	0/1:10,0:11:32.03:32,0,67	0/1:6,0:5:8.20:8,0,37
chr10	90632265	.	T	TA	527.12	PASS	AB=1.000;AC=31;AF=0.574;AN=54;BaseQRankSum=6.034;DP=307;FS=17.323;HRun=0;HaplotypeScore=33.7197;InbreedingCoeff=0.6523;MQ=82.97;MQ0=22;MQRankSum=-1.494;QD=11.46;ReadPosRankSum=-6.637;VQSLOD=0.5633;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:72.13:0,72,1004	0/0:3,0:3:9.03:0,9,126	0/0:51,0:14:42.11:0,42,562	0/0:50,0:21:63.18:0,63,857	1/1:2,3:4:2.85:36,3,0	1/1:0,3:3:6.02:72,6,0	1/1:2,0:2:2.92:21,3,0	1/1:3,0:3:5.90:55,6,0	1/1:1,0:1:3.01:37,3,0	0/0:20,0:20:60.20:0,60,834	0/0:18,0:18:39.13:0,39,545	1/1:0,0:1:3.01:40,3,0	1/1:1,0:1:3.01:39,3,0	1/1:0,2:2:3.01:34,3,0	0/0:19,0:19:54.18:0,54,755	0/0:20,0:19:51.17:0,51,713	0/0:22,0:21:57.19:0,57,791	0/0:19,0:17:51.17:0,51,713	1/1:4,0:3:5.97:46,6,0	1/1:1,5:6:5.99:69,6,0	1/1:5,0:3:2.99:24,3,0	./.	0/1:2,0:2:0:0,0,0	1/1:4,0:2:3.01:38,3,0	0/0:7,0:7:15.05:0,15,210	1/1:1,0:1:3.01:40,3,0	1/1:1,3:3:6.02:69,6,0	1/1:2,0:2:6.02:87,6,0
chr10	90632639	.	TA	T	2166.36	PASS	AB=0.615;AC=38;AF=0.679;AN=56;BaseQRankSum=0.069;DP=360;FS=1.116;HRun=15;HaplotypeScore=51.1333;InbreedingCoeff=0.5959;MQ=59.08;MQ0=5;MQRankSum=-1.038;QD=8.92;ReadPosRankSum=0.649;VQSLOD=2.7848;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:17:32.38:207,32,0	1/1:1,0:6:6.10:18,6,0	0/0:24,0:9:15.72:0,16,99	0/0:12,0:8:13.88:0,14,77	1/1:4,13:17:31.65:210,32,0	0/1:3,5:10:4.53:86,0,5	1/1:0,3:3:5.91:38,6,0	1/1:10,11:23:33.45:203,33,0	1/1:6,12:18:8.95:185,9,0	0/0:18,0:21:38.65:0,39,311	0/0:23,1:23:13.03:0,13,214	1/1:2,5:7:11.80:77,12,0	0/1:4,6:10:5.56:94,0,6	1/1:0,8:8:14.69:96,15,0	1/1:3,0:14:22.17:64,22,0	0/0:12,0:12:26.91:0,27,222	1/1:1,1:15:27.40:90,27,0	0/0:9,0:10:29.94:0,30,255	0/1:5,3:7:12.47:50,0,12	1/1:3,9:12:23.62:154,24,0	1/1:1,2:3:2.91:19,3,0	1/1:5,4:7:11.77:74,12,0	1/1:0,6:6:14.77:96,15,0	0/1:1,3:5:15.41:33,0,15	0/0:10,0:13:16.63:0,17,197	1/1:5,15:19:23.17:268,23,0	1/1:5,16:22:34.54:217,35,0	1/1:2,6:8:1.47:81,1,0
chr10	90633134	.	TAA	T	6243.07	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=9.545;DP=452;FS=20.821;HRun=10;HaplotypeScore=54.7977;InbreedingCoeff=0.9025;MQ=59.35;MQ0=6;MQRankSum=-2.806;QD=25.07;ReadPosRankSum=-1.330;VQSLOD=2.3495;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:27:69.09:0,69,665	0/0:6,0:6:18.06:0,18,286	0/0:13,0:5:8.82:0,9,72	0/1:17,0:7:20.64:21,0,132	1/1:3,29:30:84.15:921,84,0	1/1:4,10:11:21.05:234,21,0	1/1:2,7:9:18.04:199,18,0	1/1:2,22:24:66.17:736,66,0	1/1:1,11:11:33.09:368,33,0	0/0:19,0:19:54.18:0,54,857	0/0:29,0:29:46.52:0,47,980	1/1:1,11:11:27.07:301,27,0	1/1:1,11:11:30.08:334,30,0	1/1:1,8:9:18.05:201,18,0	0/0:19,0:19:48.16:0,48,758	0/0:12,0:12:27.09:0,27,429	0/0:26,0:26:72.20:0,72,1115	0/0:21,0:21:51.17:0,51,799	1/1:2,15:16:45.12:501,45,0	1/1:2,14:16:42.11:467,42,0	1/1:1,4:5:12.03:134,12,0	1/1:3,5:7:15.04:167,15,0	1/1:1,13:13:39.11:435,39,0	1/1:0,8:8:21.06:234,21,0	0/0:30,0:30:86.09:0,86,1314	1/1:5,13:18:36.07:390,36,0	1/1:3,12:14:36.09:401,36,0	1/1:1,6:6:18.05:201,18,0
chr10	90633504	.	A	ATTTTT	14644.35	PASS	AB=0.677;AC=33;AF=0.589;AN=56;BaseQRankSum=-3.250;DP=583;FS=5.818;HRun=9;HaplotypeScore=116.0141;InbreedingCoeff=0.9077;MQ=65.45;MQ0=0;MQRankSum=-9.205;QD=41.60;ReadPosRankSum=-3.995;VQSLOD=2.4214;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.21:0,66,1093	0/0:9,0:9:24.07:0,24,398	0/0:13,0:13:21.03:0,21,319	0/0:21,0:22:41.89:0,42,621	1/1:17,19:42:79.78:1778,80,0	1/1:9,6:17:24.08:588,24,0	1/1:3,10:15:37.94:951,38,0	1/1:16,9:30:57.18:1309,57,0	1/1:6,15:22:51.17:1345,51,0	0/0:25,0:25:63.16:0,63,1023	0/0:25,0:26:59.13:0,59,992	1/1:11,6:20:22.89:560,23,0	1/1:3,11:17:33.11:909,33,0	1/1:6,10:19:21.07:570,21,0	0/0:20,0:20:60.21:0,60,991	0/0:20,0:21:56.66:0,57,904	0/0:28,0:28:81.24:0,81,1315	0/0:25,0:25:66.13:0,66,1058	1/1:15,2:17:9.03:256,9,0	1/1:5,9:18:36.12:846,36,0	1/1:6,4:11:10.85:227,11,0	1/1:5,15:26:54.14:1277,54,0	1/1:12,11:26:41.72:1081,42,0	1/1:4,6:11:21.07:570,21,0	0/0:17,0:17:45.07:0,45,717	0/1:11,6:21:53.04:801,0,53	1/1:9,12:27:49.98:1166,50,0	1/1:4,7:12:15.05:412,15,0
chr10	90633876	.	C	CGGAAGGCA	11857.34	PASS	AB=0.667;AC=33;AF=0.589;AN=56;BaseQRankSum=-4.498;DP=453;FS=68.238;HRun=0;HaplotypeScore=112.0139;InbreedingCoeff=0.8620;MQ=60.78;MQ0=0;MQRankSum=-11.450;QD=50.89;ReadPosRankSum=-3.437;VQSLOD=1.8012;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.28:0,90,2237	0/0:7,0:7:12.04:0,12,324	0/0:15,0:14:39.13:0,39,947	0/0:18,0:18:36.11:0,36,829	1/1:10,9:19:23.13:927,23,0	1/1:3,5:9:15.05:504,15,0	1/1:11,7:18:21.07:900,21,0	1/1:19,2:21:21.06:700,21,0	1/1:3,16:20:42.14:1708,42,0	0/0:19,0:19:36.09:0,36,847	0/0:17,0:17:36.12:0,36,903	1/1:6,10:16:27.09:1157,27,0	1/1:2,4:7:6.02:257,6,0	1/1:1,6:9:15.05:553,15,0	0/0:24,0:24:72.25:0,72,1861	0/0:13,0:13:33.11:0,33,855	0/0:34,0:34:87.27:0,87,2232	0/0:26,0:26:66.23:0,66,1724	1/1:8,2:11:18.05:550,18,0	1/1:3,10:13:30.10:1106,30,0	1/1:4,10:14:12.04:239,12,0	1/1:4,6:9:12.04:514,12,0	1/1:8,7:14:17.91:548,18,0	1/1:4,11:17:15.05:642,15,0	0/0:15,0:15:30.10:0,30,775	0/1:9,8:18:50.87:856,0,51	1/1:5,5:10:15.05:590,15,0	1/1:1,0:1:3.01:105,3,0
chr10	90633982	.	G	GAGA	5454.46	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=6.965;DP=400;FS=0.000;HRun=0;HaplotypeScore=83.2539;InbreedingCoeff=0.9292;MQ=57.46;MQ0=3;MQRankSum=-8.580;QD=28.86;ReadPosRankSum=-0.710;VQSLOD=4.1062;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:63.21:0,63,945	0/0:10,0:10:24.07:0,24,344	0/0:32,0:25:41.84:0,42,636	0/0:23,0:13:2.79:0,3,236	1/1:13,1:14:36.10:501,36,0	1/1:9,0:9:12.04:191,12,0	1/1:13,1:14:27.02:358,27,0	1/1:7,6:12:27:358,27,0	1/1:11,1:11:30.06:451,30,0	0/0:18,0:18:42.14:0,42,621	0/0:13,0:13:30.10:0,30,445	1/1:10,8:18:24.07:379,24,0	1/1:9,0:9:18.04:259,18,0	1/1:4,0:4:9.02:118,9,0	0/0:13,0:13:27.05:0,27,384	0/0:17,0:17:27.07:0,27,369	0/0:19,0:19:48.16:0,48,727	0/0:19,0:19:51.09:0,51,741	1/1:13,0:13:24.08:383,24,0	1/1:19,1:21:38.68:574,39,0	1/1:5,0:5:9.02:117,9,0	1/1:9,0:9:24.06:330,24,0	1/1:6,3:9:12.04:196,12,0	1/1:9,0:9:21:304,21,0	0/0:18,0:18:41.63:0,42,588	1/1:6,11:17:36.03:516,36,0	1/1:6,2:8:18.06:312,18,0	1/1:5,0:5:6.02:108,6,0
chr10	90633992	.	A	AG	1406.34	PASS	AB=0.952;AC=31;AF=0.554;AN=56;BaseQRankSum=9.212;DP=355;FS=0.000;HRun=0;HaplotypeScore=83.4300;InbreedingCoeff=0.7288;MQ=55.69;MQ0=4;MQRankSum=-6.600;QD=9.90;ReadPosRankSum=0.035;VQSLOD=3.3404;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.19:0,69,934	0/0:11,0:11:30.09:0,30,402	0/0:34,0:19:45.13:0,45,611	0/0:22,0:9:23.82:0,24,250	1/1:12,0:12:14.68:150,15,0	1/1:6,0:6:11.60:66,12,0	0/1:13,0:13:29.32:64,0,29	1/1:8,0:7:1.18:88,1,0	1/1:11,0:10:20.76:151,21,0	0/0:21,0:21:57.10:0,57,738	0/0:13,0:13:39.13:0,39,542	1/1:13,0:13:18.20:104,18,0	1/1:6,0:6:17.35:102,17,0	0/1:3,0:3:6.06:18,0,6	0/0:16,0:16:33.06:0,33,427	0/0:13,0:13:33.09:0,33,429	0/0:19,0:19:57.19:0,57,787	0/0:18,0:18:54.13:0,54,719	1/1:10,0:9:20.77:149,21,0	1/1:15,0:15:12.70:152,13,0	0/1:5,1:6:17.49:39,0,17	1/1:8,0:8:17.08:110,17,0	1/1:6,0:6:10.71:46,11,0	1/1:5,3:8:16.29:120,16,0	0/0:20,0:20:51.11:0,51,648	1/1:8,0:8:16.70:115,17,0	1/1:7,0:7:16.98:101,17,0	1/1:2,0:2:5.98:46,6,0
chr10	90633993	.	A	AAAG	3742.43	PASS	AB=0.944;AC=33;AF=0.589;AN=56;BaseQRankSum=10.464;DP=358;FS=1.000;HRun=0;HaplotypeScore=92.4197;InbreedingCoeff=0.7500;MQ=54.92;MQ0=4;MQRankSum=-8.920;QD=22.54;ReadPosRankSum=-0.390;VQSLOD=3.2797;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:65.58:0,66,960	0/0:11,0:11:24.08:0,24,351	0/0:34,0:19:28.94:0,29,465	0/1:22,0:9:21.39:21,0,80	1/1:12,0:11:13.60:147,14,0	0/1:6,0:6:2.89:177,0,3	1/1:12,1:13:26.65:346,27,0	1/1:7,1:7:11.25:182,11,0	1/1:10,1:10:26.54:351,27,0	0/0:22,0:22:60.04:0,60,814	0/0:13,0:13:39.13:0,39,575	1/1:12,0:12:24.06:343,24,0	1/1:7,0:6:15.05:236,15,0	1/1:2,1:3:9.03:152,9,0	0/0:16,0:16:33.03:0,33,431	0/0:12,0:12:21.07:0,21,308	0/0:19,0:19:48.96:0,49,769	0/0:18,0:18:42.10:0,42,619	1/1:10,0:9:12:191,12,0	1/1:14,1:15:11.65:308,12,0	0/1:4,0:5:3:114,0,3	1/1:7,0:7:11.71:148,12,0	1/1:6,0:6:12.03:159,12,0	1/1:6,0:9:2.84:217,3,0	0/0:21,0:21:47.14:0,47,623	1/1:9,0:9:20.98:266,21,0	1/1:8,0:7:18.03:273,18,0	1/1:3,0:3:6.02:110,6,0
chr10	90634007	.	AAAGAAGAAG	A	1087.21	PASS	AC=14;AF=0.350;AN=40;BaseQRankSum=-2.289;DP=341;FS=1.263;HRun=0;HaplotypeScore=131.0053;InbreedingCoeff=0.5527;MQ=48.33;MQ0=13;MQRankSum=0.604;QD=8.99;ReadPosRankSum=0.385;VQSLOD=2.5422;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,4:26:6.02:118,6,0	1/1:5,0:8:2.49:6,2,0	./.	./.	0/0:6,0:6:1.55:0,2,4	./.	0/0:16,0:12:4.09:0,4,17	./.	1/1:9,0:8:2.87:15,3,0	1/1:17,6:24:13.29:287,13,0	1/1:9,6:15:9.03:239,9,0	./.	0/0:6,0:7:4.25:0,4,29	0/0:3,0:5:5.97:0,6,46	1/1:8,8:16:12.04:319,12,0	0/0:7,0:10:12.04:0,12,159	0/0:15,0:21:5.88:0,6,94	0/0:18,0:18:8.51:0,9,225	0/0:10,0:10:2.88:0,3,15	0/0:11,0:11:5.96:0,6,48	./.	0/0:4,0:7:8.68:0,9,54	./.	./.	1/1:14,6:21:9.03:239,9,0	0/0:3,0:4:3.01:0,3,35	0/0:5,0:6:3:0,3,25	0/0:2,0:3:3.01:0,3,32
chr10	90634008	.	A	AG	758.94	PASS	AB=0.758;AC=27;AF=0.482;AN=56;BaseQRankSum=11.192;DP=339;FS=0.000;HRun=0;HaplotypeScore=88.2718;InbreedingCoeff=0.4486;MQ=48.30;MQ0=13;MQRankSum=-9.323;QD=5.75;ReadPosRankSum=-0.926;VQSLOD=2.9567;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:69.16:0,69,900	0/0:8,0:8:24.03:0,24,292	0/0:28,0:12:23.92:0,24,315	0/0:16,0:4:1.90:0,2,78	1/1:4,3:6:1.43:31,1,0	0/1:1,4:5:25.45:45,0,25	0/1:10,5:11:30.89:48,0,31	0/1:14,2:8:22.63:68,0,23	1/1:3,7:8:21.86:115,22,0	0/0:24,0:24:66.07:0,66,824	0/0:15,0:15:39.05:0,39,481	1/1:2,6:7:12.06:85,12,0	1/1:4,5:7:15.32:85,15,0	0/1:3,2:5:4.02:17,0,4	0/0:16,0:16:32.94:0,33,359	0/0:11,0:10:21.07:0,21,293	0/0:21,0:21:31.21:0,31,628	0/0:17,1:18:13.01:0,13,596	1/1:8,3:10:12.01:71,12,0	1/1:4,4:7:10.66:70,11,0	0/1:5,1:6:12.84:13,0,75	0/1:3,3:6:1.91:46,0,2	1/1:0,3:3:8.38:38,8,0	0/1:6,1:7:31.46:31,0,41	0/0:22,0:22:41.04:0,41,538	1/1:1,3:4:11.25:65,11,0	1/1:3,5:6:16.72:84,17,0	1/1:1,2:3:8.20:42,8,0
chr10	90634020	.	AAG	A	229.77	PASS	AB=0.837;AC=12;AF=0.214;AN=56;BaseQRankSum=5.013;DP=327;FS=13.123;HRun=0;HaplotypeScore=96.5537;InbreedingCoeff=-0.2713;MQ=40.84;MQ0=13;MQRankSum=-6.601;QD=2.32;ReadPosRankSum=-3.653;VQSLOD=-0.1074;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:53.62:0,54,696	0/0:8,0:8:14.01:0,14,209	0/0:18,0:4:7.56:0,8,65	0/0:9,0:1:3.01:0,3,37	0/1:5,1:5:40.76:41,0,53	0/1:4,2:6:41.41:41,0,69	0/1:14,1:11:4.82:5,0,182	0/0:16,0:8:17.68:0,18,167	0/0:9,0:7:2.16:0,2,164	0/0:21,0:21:35.58:0,36,560	0/0:15,0:15:19.46:0,19,350	0/1:9,1:8:6.35:6,0,150	0/1:8,1:7:18.21:18,0,108	0/0:5,0:5:10.84:0,11,91	0/0:16,0:16:6.94:0,7,234	0/0:12,0:11:24.07:0,24,288	0/0:19,0:19:35.12:0,35,477	0/0:21,0:21:45.33:0,45,634	0/1:10,2:11:53.03:53,0,92	0/1:9,1:9:27.95:28,0,157	0/0:7,0:7:15.03:0,15,169	0/1:6,2:8:54.32:54,0,91	0/1:3,2:5:37.22:37,0,96	0/0:7,0:7:12.04:0,12,158	0/0:19,0:19:16.49:0,16,317	0/1:3,1:4:7.48:23,0,7	0/1:8,1:7:24.64:25,0,100	0/1:3,2:5:42.42:42,0,70
chr10	90634026	.	A	AG	903.48	PASS	AB=0.729;AC=14;AF=0.269;AN=52;BaseQRankSum=6.098;DP=337;FS=1.389;HRun=1;HaplotypeScore=100.0969;InbreedingCoeff=-0.3651;MQ=41.36;MQ0=19;MQRankSum=-5.786;QD=7.59;ReadPosRankSum=-3.277;VQSLOD=-0.3193;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:69.10:0,69,930	0/0:8,0:8:23.86:0,24,262	./.	./.	0/1:8,2:10:40.76:55,0,41	0/1:3,3:6:68.54:102,0,69	0/1:12,1:9:11.51:12,0,185	0/0:21,0:7:17.98:0,18,199	0/0:10,0:8:22.41:0,22,252	0/0:23,0:23:62.72:0,63,771	0/0:15,0:15:44.70:0,45,525	0/1:6,1:7:19.95:20,0,156	0/1:3,2:5:37.16:37,0,82	0/1:2,2:5:38.23:38,0,72	0/0:18,0:18:32.57:0,33,351	0/0:13,0:11:24.08:0,24,334	0/0:20,0:20:47.96:0,48,600	0/0:20,0:20:56.99:0,57,723	0/1:11,2:14:80.80:81,0,81	0/1:7,7:14:99:306,0,121	0/0:7,0:7:14.99:0,15,167	0/1:4,3:9:99:104,0,99	0/1:4,2:6:50.39:50,0,80	0/1:6,0:6:11.29:11,0,138	0/0:19,0:19:38.72:0,39,449	0/1:1,1:3:32.86:45,0,33	0/1:6,2:7:72.22:72,0,108	0/1:2,3:6:28.97:120,0,29
chr10	90634295	.	T	TAAAAAAAAAAACA	14063.48	PASS	AC=32;AF=0.593;AN=54;BaseQRankSum=7.442;DP=434;FS=71.686;HRun=0;HaplotypeScore=157.8234;InbreedingCoeff=0.8989;MQ=52.87;MQ0=1;MQRankSum=-11.912;QD=59.84;ReadPosRankSum=-3.277;VQSLOD=1.7654;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:19.53:0,20,2340	0/0:4,0:4:6.02:0,6,211	0/0:14,0:10:1.98:0,2,110	0/0:7,0:4:2.59:0,3,10	1/1:17,4:22:49.12:1210,49,0	1/1:10,4:14:38.99:1238,39,0	1/1:13,3:15:20.99:692,21,0	1/1:22,0:23:26.97:642,27,0	1/1:13,2:13:20.92:523,21,0	0/0:32,0:34:75.16:0,75,2312	0/0:12,0:12:27.09:0,27,919	1/1:12,2:14:30.09:1318,30,0	1/1:10,2:13:30.07:1053,30,0	1/1:11,0:11:17.96:339,18,0	0/0:13,0:13:30.07:0,30,898	0/0:13,0:13:30.05:0,30,917	0/0:31,0:31:58.66:0,59,2215	0/0:20,0:20:45.15:0,45,1544	1/1:14,1:15:21.07:907,21,0	1/1:16,4:20:38.95:1497,39,0	./.	1/1:3,0:3:5.98:189,6,0	1/1:13,1:13:23.98:599,24,0	1/1:5,0:4:9.03:366,9,0	0/0:14,0:14:27.05:0,27,886	1/1:12,1:14:35.88:1213,36,0	1/1:20,1:22:47.84:1448,48,0	1/1:8,4:11:23.98:830,24,0
chr10	90634329	.	AAAAG	A	8379.41	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=13.639;DP=445;FS=16.475;HRun=0;HaplotypeScore=97.2830;InbreedingCoeff=0.9352;MQ=65.77;MQ0=0;MQRankSum=-8.335;QD=37.24;ReadPosRankSum=-3.493;VQSLOD=3.2175;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,117,2864	0/0:4,0:4:12.04:0,12,279	0/0:11,0:11:21.07:0,21,510	0/0:12,0:8:1.68:0,2,301	1/1:4,18:22:48.12:806,48,0	1/1:3,11:14:30.10:509,30,0	1/1:4,13:17:39.07:644,39,0	1/1:7,20:27:60.10:984,60,0	1/1:3,7:10:21.07:353,21,0	0/0:33,0:33:81.28:0,81,2069	0/0:15,0:15:42.14:0,42,1073	1/1:1,10:10:24.08:420,24,0	1/1:3,9:12:24.08:406,24,0	1/1:1,4:5:15.05:263,15,0	0/0:17,0:17:45.15:0,45,1149	0/0:14,0:14:33.11:0,33,842	0/0:31,0:31:75.26:0,75,1913	0/0:19,0:19:54.19:0,54,1364	1/1:7,9:16:27.09:456,27,0	1/1:3,14:17:42.14:714,42,0	1/1:1,3:4:6.02:105,6,0	1/1:0,3:3:9.03:157,9,0	1/1:2,13:14:33.11:577,33,0	1/1:0,10:10:15.05:247,15,0	0/0:20,0:20:54.19:0,54,1370	1/1:2,11:13:34.93:583,35,0	1/1:4,14:18:39.13:682,39,0	1/1:0,11:11:27.09:473,27,0
chr10	90634634	.	TA	T	8643.45	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=0.759;DP=642;FS=0.000;HRun=9;HaplotypeScore=73.2662;InbreedingCoeff=0.9985;MQ=70.72;MQ0=0;MQRankSum=-4.061;QD=22.11;ReadPosRankSum=1.652;VQSLOD=5.5553;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,126,1420	0/0:6,0:6:18.05:0,18,207	0/0:19,1:17:24.11:0,24,283	0/0:18,0:19:39.76:0,40,414	1/1:3,30:33:80.94:729,81,0	1/1:1,23:24:60.03:549,60,0	1/1:4,27:31:75.04:686,75,0	1/1:9,15:24:44.98:401,45,0	1/1:1,21:22:54.03:494,54,0	0/0:31,0:31:71.24:0,71,356	0/0:18,0:18:47.33:0,47,307	1/1:0,19:19:48.03:439,48,0	1/1:0,20:20:54.03:494,54,0	1/1:0,15:15:39.02:357,39,0	0/0:23,0:23:60.18:0,60,692	0/0:20,0:20:52.69:0,53,329	0/0:42,0:42:99:0,117,1337	0/0:15,0:15:37.58:0,38,229	1/1:2,14:16:42.02:384,42,0	1/1:1,23:24:63.03:576,63,0	1/1:3,15:18:39.02:357,39,0	1/1:0,14:14:41.98:376,42,0	1/1:1,23:24:50.94:465,51,0	1/1:1,20:21:48.03:439,48,0	0/0:11,0:11:32.43:0,32,211	1/1:7,35:42:87.95:897,88,0	1/1:3,24:27:69.03:631,69,0	1/1:2,14:17:41.62:367,42,0
chr10	90635128	.	TA	T	5469.17	PASS	AB=0.912;AC=47;AF=0.839;AN=56;BaseQRankSum=7.601;DP=327;FS=4.721;HRun=10;HaplotypeScore=38.7587;InbreedingCoeff=0.5636;MQ=71.40;MQ0=1;MQRankSum=-0.719;QD=18.60;ReadPosRankSum=0.363;VQSLOD=5.1831;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.13:0,69,731	0/0:3,0:3:9.02:0,9,100	0/1:12,0:11:9.02:9,0,98	0/1:7,1:5:19.31:21,0,19	1/1:2,8:10:23.99:208,24,0	1/1:0,18:18:44.99:391,45,0	1/1:0,7:7:21:182,21,0	1/1:5,27:32:47.77:636,48,0	1/1:0,3:3:9:78,9,0	1/1:2,16:18:44.96:386,45,0	1/1:1,10:11:29.95:253,30,0	1/1:0,3:3:9:78,9,0	1/1:1,6:7:14.99:130,15,0	1/1:1,2:3:6:52,6,0	0/0:4,0:4:12.03:0,12,133	1/1:0,7:7:18:156,18,0	0/1:20,2:22:3.98:4,0,416	1/1:1,19:20:44.99:391,45,0	1/1:1,12:13:35.99:312,36,0	1/1:2,6:8:14.99:130,15,0	1/1:1,14:15:35.99:313,36,0	1/1:1,2:3:5.99:52,6,0	1/1:1,4:5:11.98:100,12,0	1/1:0,4:4:12:104,12,0	1/1:5,16:21:47.98:417,48,0	1/1:2,17:19:50.97:439,51,0	1/1:0,18:18:53.99:469,54,0	1/1:0,6:6:18:156,18,0
chr10	90636415	.	G	GA	845.66	PASS	AB=0.815;AC=13;AF=0.232;AN=56;BaseQRankSum=-2.394;DP=505;FS=0.562;HRun=15;HaplotypeScore=60.5234;InbreedingCoeff=0.2084;MQ=59.07;MQ0=15;MQRankSum=-0.193;QD=4.17;ReadPosRankSum=1.614;VQSLOD=0.6779;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,16:31:45.87:130,0,46	0/0:2,0:7:10.35:0,10,30	0/1:29,0:11:10.73:19,0,11	0/1:23,0:8:6.26:6,0,14	0/0:14,0:17:6.55:0,7,73	0/0:13,0:14:13.21:0,13,123	0/0:16,4:21:0.23:0,0,105	0/0:27,1:35:35.47:0,35,275	0/0:11,0:12:19.55:0,20,113	1/1:6,15:22:23.79:293,24,0	0/1:7,12:18:26.68:88,0,27	0/0:12,0:11:16.30:0,16,103	0/0:9,0:9:11.58:0,12,72	0/0:11,0:11:20.46:0,20,125	0/0:4,0:17:20.35:0,20,68	1/1:1,4:7:17.67:129,18,0	0/0:11,0:23:19.84:0,20,57	0/1:6,16:23:21.81:189,0,22	0/0:19,0:19:24.10:0,24,128	0/0:6,0:9:6.81:0,7,29	0/0:21,0:20:28.34:0,28,167	0/0:9,0:9:10.22:0,10,69	0/0:11,0:11:14:0,14,86	0/0:25,1:27:13.60:0,14,173	1/1:2,11:15:2.65:110,3,0	0/1:21,1:22:31.63:32,0,91	0/0:20,0:22:25.10:0,25,144	0/1:8,1:9:7.50:8,0,71
chr10	90636547	.	GC	G	7563.20	PASS	AC=34;AF=0.654;AN=52;BaseQRankSum=10.383;DP=447;FS=12.059;HRun=3;HaplotypeScore=47.8079;InbreedingCoeff=0.9793;MQ=49.19;MQ0=32;MQRankSum=-2.648;QD=26.44;ReadPosRankSum=-1.773;VQSLOD=2.6894;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:21:48.16:0,48,691	0/0:3,0:3:9.03:0,9,130	./.	./.	1/1:4,14:18:36.07:407,36,0	1/1:3,15:17:39.12:483,39,0	1/1:4,16:17:39.12:483,39,0	1/1:3,34:35:93.24:1123,93,0	1/1:0,11:11:33.10:409,33,0	0/0:17,0:16:42.14:0,42,604	0/0:11,0:10:30.10:0,30,431	1/1:4,6:8:21.06:254,21,0	1/1:3,13:15:36.11:446,36,0	1/1:3,11:12:30.09:372,30,0	0/0:14,0:14:36.12:0,36,518	0/0:7,0:6:18.06:0,18,259	0/0:39,0:39:99:0,105,1509	0/0:25,1:26:32.07:0,32,884	1/1:4,12:14:36.11:446,36,0	1/1:2,15:17:36.11:446,36,0	1/1:5,15:19:10.14:315,10,0	1/1:0,13:13:24.08:297,24,0	1/1:0,10:10:27.08:335,27,0	1/1:7,10:13:21.07:260,21,0	0/0:11,0:11:27.09:0,27,372	1/1:1,15:14:39.12:483,39,0	1/1:4,19:21:51.16:632,51,0	1/1:0,10:10:30.09:372,30,0
chr10	90636608	.	T	TA	7065.80	PASS	AB=0.941;AC=37;AF=0.661;AN=56;BaseQRankSum=-7.342;DP=412;FS=1.352;HRun=8;HaplotypeScore=43.7734;InbreedingCoeff=0.9023;MQ=62.47;MQ0=4;MQRankSum=-1.046;QD=24.88;ReadPosRankSum=-0.567;VQSLOD=5.0808;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:17:30.09:346,30,0	0/0:3,0:3:8.96:0,9,74	0/0:7,0:5:12:0,12,110	0/0:8,0:6:12.01:0,12,110	1/1:2,23:25:63.15:712,63,0	1/1:2,16:18:48.14:554,48,0	1/1:2,12:14:39.10:439,39,0	1/1:10,25:31:75.17:833,75,0	1/1:3,11:14:5.68:319,6,0	0/0:17,0:17:51.01:0,51,461	0/0:21,0:22:62.07:0,62,555	1/1:1,11:11:30.09:346,30,0	1/1:1,5:6:15.04:173,15,0	1/1:2,7:9:21.06:242,21,0	0/0:19,0:19:56.23:0,56,494	0/0:11,0:11:27:0,27,247	0/0:27,0:27:71.99:0,72,647	0/1:15,1:15:1.58:2,0,241	1/1:10,12:22:36.11:416,36,0	1/1:4,16:20:23.69:523,24,0	1/1:1,4:5:12.04:139,12,0	1/1:0,5:5:15.04:173,15,0	1/1:2,6:8:18.05:208,18,0	1/1:1,4:5:12.04:138,12,0	0/0:14,0:14:36:0,36,326	1/1:5,17:20:51.13:576,51,0	1/1:4,14:18:48.10:523,48,0	1/1:2,11:13:36.09:405,36,0
chr10	90637397	.	A	AAATTTCACTC	2630.38	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.435;DP=652;FS=0.000;HRun=0;HaplotypeScore=190.8824;InbreedingCoeff=0.8395;MQ=77.13;MQ0=0;MQRankSum=-6.436;QD=105.22;ReadPosRankSum=1.325;VQSLOD=3.8380;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:25:51.18:2725,51,0	0/0:8,0:8:24.08:0,24,749	0/0:14,0:14:39.13:0,39,1176	0/0:20,0:20:4.82:0,5,1282	0/0:30,0:30:90.31:0,90,3089	0/0:25,0:25:72.25:0,72,2381	0/0:21,0:21:63.20:0,63,2068	0/0:30,0:30:87.28:0,87,2662	0/0:28,0:28:81.28:0,81,2724	0/0:31,0:31:93.26:0,93,2781	0/0:16,0:16:48.16:0,48,1647	0/0:29,0:29:84.28:0,84,2733	0/0:21,0:21:63.22:0,63,2108	0/0:28,0:28:84.26:0,84,2745	0/0:29,0:29:87.30:0,87,2867	0/0:29,0:29:84.76:0,85,2715	0/0:33,0:33:99:0,99,3161	0/0:19,0:19:54.19:0,54,1700	0/0:24,0:24:66.22:0,66,2093	0/0:27,0:27:81.24:0,81,2530	0/0:31,0:31:93.30:0,93,2990	0/0:24,0:24:72.23:0,72,2284	0/0:24,0:24:72.25:0,72,2415	0/0:22,0:22:66.23:0,66,2200	0/0:14,0:14:42.14:0,42,1397	0/0:18,0:18:54.19:0,54,1856	0/0:29,0:29:87.30:0,87,2856	0/0:3,0:3:9.03:0,9,273
chr10	90638348	.	ACC	A	321.84	PASS	AB=0.821;AC=5;AF=0.089;AN=56;BaseQRankSum=-3.356;DP=398;FS=0.992;HRun=12;HaplotypeScore=83.1300;InbreedingCoeff=0.3161;MQ=77.69;MQ0=1;MQRankSum=-1.101;QD=5.19;ReadPosRankSum=2.121;VQSLOD=-0.4213;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,15:31:41.50:404,41,0	0/1:4,0:4:16.52:17,0,82	0/0:12,0:11:14.70:0,15,151	0/0:16,0:16:20.48:0,20,219	0/0:10,0:10:21.81:0,22,169	0/0:16,0:16:17.64:0,18,133	0/0:16,0:17:34.75:0,35,344	0/0:13,0:13:11.97:0,12,97	0/0:8,0:8:15:0,15,130	0/0:18,0:18:15.02:0,15,169	0/0:9,0:11:11.69:0,12,112	0/0:15,0:16:26.50:0,27,237	0/0:15,0:15:19.23:0,19,156	0/0:12,0:13:17.99:0,18,153	0/1:8,1:12:13.71:14,0,49	0/0:13,0:14:30.04:0,30,330	0/1:9,1:15:1.08:1,0,101	0/0:15,0:16:21.49:0,21,216	0/0:16,0:16:17.96:0,18,148	0/0:8,0:7:8.66:0,9,58	0/0:33,0:35:36.45:0,36,311	0/0:13,0:13:21.03:0,21,204	0/0:11,0:11:12.26:0,12,89	0/0:16,0:17:27:0,27,240	0/0:7,0:7:9.02:0,9,106	0/0:12,0:12:17.98:0,18,151	0/0:12,0:11:14.94:0,15,126	0/0:10,0:10:8.98:0,9,77
chr10	90638359	.	C	CG	2746.50	PASS	AB=0.717;AC=30;AF=0.536;AN=56;BaseQRankSum=-2.748;DP=383;FS=18.569;HRun=0;HaplotypeScore=83.6382;InbreedingCoeff=0.7324;MQ=79.19;MQ0=1;MQRankSum=-0.045;QD=11.40;ReadPosRankSum=2.012;VQSLOD=2.6401;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:55.25:0,55,331	0/0:4,0:5:8.88:0,9,82	0/0:15,0:14:22.35:0,22,249	0/0:15,0:15:25.78:0,26,227	1/1:2,9:11:14.68:189,15,0	1/1:3,7:10:14.99:172,15,0	1/1:10,11:21:32.77:423,33,0	1/1:1,7:8:17.98:178,18,0	1/1:1,9:10:14.86:180,15,0	0/0:14,0:14:18.02:0,18,190	0/0:7,0:7:8.05:0,8,74	1/1:17,2:20:4.03:210,4,0	1/1:4,11:15:11.85:151,12,0	1/1:7,11:18:8.96:109,9,0	0/0:9,0:9:14.59:0,15,86	0/0:17,0:17:30.39:0,30,275	0/0:16,0:16:29.35:0,29,184	0/0:13,0:13:27.43:0,27,225	1/1:4,12:16:32.70:307,33,0	1/1:4,3:6:8.77:74,9,0	0/1:17,3:36:4.01:132,0,4	0/1:12,0:12:3.41:46,0,3	1/1:2,3:5:11.81:137,12,0	1/1:5,17:22:19.57:284,20,0	0/0:6,0:6:9.01:0,9,94	1/1:2,9:11:20.95:258,21,0	0/1:6,10:15:1.19:68,0,1	0/1:1,2:3:0.66:34,0,1
chr10	90638984	.	AT	A	5673.07	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-8.850;DP=414;FS=19.692;HRun=9;HaplotypeScore=68.3989;InbreedingCoeff=0.9745;MQ=76.58;MQ0=1;MQRankSum=-4.857;QD=22.42;ReadPosRankSum=1.863;VQSLOD=3.6423;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:66.96:0,67,303	1/1:3,6:9:18:165,18,0	0/0:21,0:18:32.07:0,32,306	0/0:18,0:14:23.59:0,24,211	1/1:3,14:17:44.94:401,45,0	1/1:1,10:11:29.95:265,30,0	1/1:1,7:8:21.01:192,21,0	1/1:10,23:33:78.02:714,78,0	1/1:1,9:10:26.94:237,27,0	0/0:18,0:18:43.95:0,44,196	0/0:16,0:16:44.92:0,45,208	1/1:0,9:9:26.97:239,27,0	1/1:0,8:8:24.01:220,24,0	1/1:3,2:5:5.99:53,6,0	1/1:1,12:13:36.01:329,36,0	0/0:20,0:20:36.20:0,36,161	1/1:4,23:27:57.03:521,57,0	0/0:19,0:19:49.60:0,50,220	1/1:8,11:19:50.97:451,51,0	1/1:3,9:12:27.01:247,27,0	1/1:3,5:8:15.01:137,15,0	1/1:1,8:9:20.93:181,21,0	1/1:1,9:10:27.01:247,27,0	1/1:1,7:8:24.01:220,24,0	0/0:17,0:17:41.92:0,42,188	1/1:4,14:18:32.26:372,32,0	1/1:2,6:8:21:189,21,0	1/1:0,11:11:32.97:294,33,0
chr10	90638985	.	T	TG	4333.62	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-13.440;DP=415;FS=19.998;HRun=0;HaplotypeScore=73.4220;InbreedingCoeff=0.9821;MQ=76.54;MQ0=1;MQRankSum=4.526;QD=36.11;ReadPosRankSum=1.487;VQSLOD=3.2159;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:72.24:1018,72,0	0/0:9,0:9:26.64:0,27,186	0/0:23,0:18:29.40:0,29,405	0/0:18,0:14:27.47:0,27,288	0/0:18,0:18:50.16:0,50,329	0/0:11,0:11:32.45:0,32,211	0/0:8,0:8:23.59:0,24,154	0/0:32,0:32:91.50:0,91,612	0/0:10,0:10:27.79:0,28,173	1/1:1,17:18:51.13:689,51,0	1/1:0,16:16:48.08:659,48,0	0/0:9,0:9:24.01:0,24,147	0/0:8,0:8:23.54:0,24,147	0/0:5,0:5:14.79:0,15,113	0/0:13,0:13:38.31:0,38,248	1/1:0,20:20:39.13:557,39,0	0/0:27,0:27:67.56:0,68,423	1/1:0,19:19:54.18:768,54,0	0/0:19,0:19:51.86:0,52,331	0/0:12,0:12:35.48:0,35,244	0/0:8,0:8:17.71:0,18,119	0/0:9,0:9:23.62:0,24,158	0/0:10,0:10:29.49:0,29,190	0/0:8,0:8:23.54:0,24,147	1/1:0,17:17:45.15:643,45,0	0/0:18,1:19:10.25:0,10,293	0/0:8,0:8:23.59:0,24,150	0/0:11,0:11:29.89:0,30,184
chr10	90640731	.	C	CT	8110.41	PASS	AB=0.571;AC=35;AF=0.625;AN=56;BaseQRankSum=-12.487;DP=476;FS=2.860;HRun=8;HaplotypeScore=43.0918;InbreedingCoeff=0.9122;MQ=62.97;MQ0=2;MQRankSum=-0.448;QD=26.33;ReadPosRankSum=-0.033;VQSLOD=5.2677;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,36:39:96.29:1108,96,0	0/0:11,0:11:29.99:0,30,268	0/0:9,0:7:11.32:0,11,78	0/0:10,0:9:17.93:0,18,157	1/1:2,33:35:87.26:1004,87,0	1/1:2,20:22:39.12:450,39,0	1/1:1,8:9:24.07:276,24,0	1/1:5,28:32:78.18:875,78,0	1/1:1,10:11:27.08:312,27,0	0/0:24,1:25:22.40:0,22,460	0/0:21,0:21:50.94:0,51,456	1/1:1,11:12:27.08:312,27,0	1/1:1,12:13:23.93:277,24,0	1/1:1,15:16:39.11:447,39,0	0/0:13,0:13:36.01:0,36,329	0/0:10,0:10:30.02:0,30,275	0/0:16,1:16:33.02:0,33,302	0/0:23,0:23:57.03:0,57,521	1/1:3,22:24:63.14:689,63,0	1/1:0,14:14:42.12:485,42,0	1/1:3,7:10:18.05:208,18,0	1/1:1,4:5:12.04:138,12,0	1/1:4,8:12:21.06:242,21,0	1/1:1,13:14:36.11:415,36,0	0/0:29,0:28:78.04:0,78,711	0/1:4,11:16:12.98:353,0,13	1/1:2,8:10:24.07:277,24,0	1/1:4,8:12:21.06:242,21,0
chr10	90642112	.	AT	A	1571.31	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.048;DP=670;FS=0.516;HRun=7;HaplotypeScore=67.4187;InbreedingCoeff=0.9998;MQ=67.84;MQ0=0;MQRankSum=-1.301;QD=22.45;ReadPosRankSum=2.096;VQSLOD=3.4790;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,1497	1/1:1,13:14:39.09:398,39,0	0/0:29,0:27:61.33:0,61,667	0/0:25,0:21:47.72:0,48,549	0/0:32,0:32:81.26:0,81,1019	0/0:27,0:27:75.24:0,75,940	0/0:20,0:20:54.17:0,54,679	0/0:38,0:38:99:0,105,1309	0/0:19,0:19:54.17:0,54,674	0/0:30,0:30:81.26:0,81,1011	0/0:18,0:18:51.15:0,51,623	0/0:14,0:14:36.10:0,36,439	0/0:16,0:16:45.14:0,45,566	0/0:16,0:16:42.13:0,42,528	1/1:1,26:27:69.16:704,69,0	0/0:31,0:31:75.24:0,75,943	1/1:5,24:29:60.13:612,60,0	0/0:26,0:26:68.80:0,69,901	0/0:29,0:29:75.23:0,75,931	0/0:16,0:16:40.01:0,40,492	0/0:17,0:17:42.12:0,42,515	0/0:22,0:22:51.15:0,51,629	0/0:23,0:23:63.19:0,63,782	0/0:29,0:30:87.11:0,87,1071	0/0:21,0:21:63.19:0,63,779	0/0:31,0:31:87.28:0,87,1094	0/0:14,0:14:42.13:0,42,528	0/0:12,0:12:33.11:0,33,415
chr10	90644278	.	G	GA	9603.85	PASS	AB=0.593;AC=51;AF=0.911;AN=56;BaseQRankSum=-6.844;DP=575;FS=1.466;HRun=10;HaplotypeScore=65.0782;InbreedingCoeff=0.7948;MQ=83.87;MQ0=0;MQRankSum=-5.054;QD=17.85;ReadPosRankSum=2.539;VQSLOD=5.5751;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,1:40:18.58:110,19,0	1/1:4,12:17:38.93:395,39,0	0/0:21,0:23:38.51:0,39,304	0/0:14,0:14:26.72:0,27,204	1/1:2,19:21:18.31:364,18,0	0/1:5,11:16:3.59:171,0,4	1/1:4,19:23:25.36:461,25,0	1/1:7,15:22:39.53:399,40,0	1/1:3,13:16:18.05:192,18,0	1/1:5,14:19:35.75:299,36,0	1/1:2,14:16:33.04:339,33,0	1/1:3,11:15:26.90:270,27,0	1/1:1,17:19:44.93:455,45,0	1/1:2,15:17:27.07:288,27,0	1/1:3,22:25:20.83:421,21,0	1/1:7,11:18:11.45:327,11,0	1/1:2,29:32:75.02:782,75,0	1/1:7,21:28:35.51:583,36,0	1/1:5,20:25:30.83:524,31,0	1/1:3,12:15:32.90:292,33,0	1/1:3,24:27:48.12:512,48,0	1/1:2,15:17:32.86:321,33,0	1/1:2,8:11:10.79:83,11,0	1/1:5,17:23:50.96:526,51,0	1/1:1,15:16:21.05:224,21,0	1/1:6,9:15:27.03:271,27,0	1/1:12,17:29:21.79:578,22,0	1/1:1,15:16:39.10:416,39,0
chr10	90644467	.	T	TG	1585.22	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.202;DP=570;FS=2.863;HRun=4;HaplotypeScore=98.7619;InbreedingCoeff=0.9821;MQ=83.81;MQ0=0;MQRankSum=-0.792;QD=34.46;ReadPosRankSum=1.380;VQSLOD=3.7117;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,44:46:99:1680,123,0	0/0:5,0:5:15.03:0,15,161	0/0:17,0:17:50.77:0,51,484	0/0:17,0:17:38.88:0,39,403	0/0:21,0:21:57.13:0,57,627	0/0:27,0:27:78.21:0,78,875	0/0:23,0:23:69.15:0,69,749	0/0:24,0:24:71.87:0,72,785	0/0:19,0:19:57.16:0,57,646	0/0:16,0:16:39.10:0,39,436	0/0:13,0:13:36.10:0,36,406	0/0:29,0:29:81.21:0,81,909	0/0:13,0:13:33.09:0,33,374	0/0:17,0:17:51.15:0,51,578	0/0:27,0:27:78.21:0,78,877	0/0:19,0:19:54.15:0,54,613	0/0:31,0:31:90.26:0,90,1021	0/0:23,0:23:66.17:0,66,738	0/0:19,0:19:51.12:0,51,559	0/0:12,0:12:33.09:0,33,374	0/0:20,0:20:60.14:0,60,659	0/0:19,0:19:51.14:0,51,578	0/0:12,0:12:36.10:0,36,407	0/0:30,0:30:90.18:0,90,985	0/0:11,0:11:30.07:0,30,330	0/0:21,0:21:57.16:0,57,645	0/0:30,0:30:90.19:0,90,979	0/0:9,0:9:27.08:0,27,306
chr10	90644705	.	G	GGTTT	1993.59	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.724;DP=573;FS=1.551;HRun=0;HaplotypeScore=92.1414;InbreedingCoeff=0.9884;MQ=86.27;MQ0=0;MQRankSum=-3.327;QD=48.62;ReadPosRankSum=3.325;VQSLOD=4.5844;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,32:41:84.29:2088,84,0	0/0:11,0:11:30.10:0,30,518	0/0:24,0:24:45.15:0,45,763	0/0:22,0:23:57.20:0,57,981	0/0:32,0:32:72.24:0,72,1219	0/0:26,0:26:66.21:0,66,1108	0/0:14,0:14:30.10:0,30,518	0/0:26,0:26:54.17:0,54,884	0/0:21,0:21:63.20:0,63,1056	0/0:23,0:23:51.17:0,51,877	0/0:9,0:9:24.07:0,24,388	0/0:19,0:19:48.16:0,48,829	0/0:11,0:11:21.07:0,21,358	0/0:15,0:15:36.12:0,36,614	0/0:15,0:15:42.14:0,42,726	0/0:22,0:22:57.20:0,57,985	0/0:28,0:28:72.25:0,72,1244	0/0:19,0:19:45.15:0,45,764	0/0:32,0:32:63.22:0,63,1071	0/0:17,0:17:39.13:0,39,667	0/0:22,0:22:51.17:0,51,876	0/0:15,0:15:36.12:0,36,621	0/0:17,0:17:51.17:0,51,876	0/0:29,0:29:75.20:0,75,1214	0/0:16,0:16:42.12:0,42,697	0/0:27,0:27:66.20:0,66,1066	0/0:12,0:11:33.11:0,33,570	0/0:7,0:7:21.07:0,21,363
chr10	90644784	.	CGCAAAAGCTCGCCTCG	C	18636.55	PASS	AC=42;AF=0.778;AN=54;BaseQRankSum=11.813;DP=492;FS=12.311;HRun=0;HaplotypeScore=215.6016;InbreedingCoeff=0.8980;MQ=80.33;MQ0=0;MQRankSum=-9.848;QD=52.79;ReadPosRankSum=0.380;VQSLOD=3.3196;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:90.29:0,90,6438	0/0:7,0:7:9.03:0,9,490	0/0:15,0:15:18.05:0,18,581	0/0:16,0:16:24:0,24,474	1/1:6,10:16:18.06:607,18,0	1/1:2,18:20:45.15:1701,45,0	1/1:10,6:16:12.04:334,12,0	1/1:8,7:15:21.06:451,21,0	1/1:8,9:17:18.53:502,19,0	1/1:2,18:20:48.03:1519,48,0	1/1:0,12:12:29.96:697,30,0	1/1:5,10:15:24.08:867,24,0	1/1:3,9:12:18.06:700,18,0	1/1:6,12:18:21.07:932,21,0	0/0:20,0:20:36.12:0,36,2489	1/1:5,17:22:39.13:1633,39,0	0/0:26,0:26:60.18:0,60,3867	1/1:5,15:20:24.08:990,24,0	1/1:8,15:23:45.12:1241,45,0	1/1:6,14:20:32.93:923,33,0	1/1:12,10:22:3.01:35,3,0	1/1:3,7:10:15.05:551,15,0	1/1:0,10:10:20.99:816,21,0	./.	1/1:1,16:17:33.11:1355,33,0	1/1:12,19:31:57.18:1983,57,0	1/1:3,9:10:15.52:666,16,0	1/1:4,1:5:3.01:133,3,0
chr10	90645234	.	T	TTA	3065.33	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.443;DP=584;FS=9.961;HRun=0;HaplotypeScore=63.0953;InbreedingCoeff=0.9940;MQ=82.88;MQ0=0;MQRankSum=-2.937;QD=41.42;ReadPosRankSum=2.622;VQSLOD=5.1372;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,141,1887	1/1:1,10:11:30.10:526,30,0	0/0:18,0:18:42.14:0,42,559	0/0:15,0:15:39.11:0,39,501	0/0:26,0:26:69.23:0,69,934	0/0:20,0:20:54.17:0,54,714	0/0:22,0:22:54.18:0,54,730	0/0:20,0:20:42.13:0,42,555	0/0:13,0:13:39.13:0,39,527	0/0:34,0:34:99:0,99,1326	0/0:18,0:18:48.16:0,48,647	0/0:21,0:21:57.17:0,57,743	0/0:20,0:20:60.20:0,60,811	0/0:18,0:18:42.11:0,42,550	1/1:4,20:24:57.20:999,57,0	0/0:20,0:20:54.18:0,54,731	1/1:3,35:39:96.33:1683,96,0	0/0:15,0:15:45.15:0,45,608	0/0:11,0:11:33.11:0,33,446	0/0:23,0:23:60.20:0,60,812	0/0:25,0:25:60.20:0,60,812	0/0:15,0:15:42.14:0,42,568	0/0:17,0:17:51.17:0,51,690	0/0:19,0:19:48.16:0,48,648	0/0:24,0:24:57.16:0,57,739	0/0:19,0:19:54.17:0,54,717	0/0:20,0:20:48.16:0,48,649	0/0:6,0:6:15.05:0,15,203
chr10	90645554	.	AT	A	8677.90	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-7.006;DP=602;FS=0.000;HRun=10;HaplotypeScore=81.3973;InbreedingCoeff=0.9907;MQ=75.11;MQ0=0;MQRankSum=-1.762;QD=20.56;ReadPosRankSum=2.156;VQSLOD=5.6345;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,105,1137	1/1:0,7:8:16.93:136,17,0	0/0:15,0:15:35.75:0,36,377	0/0:19,0:16:12.87:0,13,233	1/1:2,19:21:53.95:461,54,0	1/1:2,12:14:32.99:286,33,0	1/1:5,14:19:38.97:339,39,0	1/1:6,24:30:68.93:598,69,0	1/1:1,19:20:53.99:468,54,0	0/0:7,0:34:65.09:0,65,384	0/0:0,0:17:47.71:0,48,235	1/1:1,20:21:59.99:521,60,0	1/1:4,20:24:59.96:521,60,0	1/1:2,12:14:32.99:286,33,0	1/1:7,23:30:23.79:436,24,0	0/0:2,0:15:34.28:0,34,182	1/1:3,29:32:86.98:755,87,0	0/0:3,0:16:42.76:0,43,219	1/1:3,29:32:86.95:750,87,0	1/1:4,22:26:62.94:541,63,0	1/1:5,15:21:38.02:319,38,0	1/1:0,23:23:62.98:547,63,0	1/1:2,14:16:41.89:355,42,0	1/1:4,22:26:37.19:449,37,0	0/0:2,0:21:45.73:0,46,244	1/1:2,15:17:44.98:391,45,0	1/1:4,19:23:44.62:390,45,0	1/1:0,5:5:15:130,15,0
chr10	90646704	.	GGGTTT	G	1642.39	PASS	AB=0.953;AC=31;AF=0.574;AN=54;BaseQRankSum=5.290;DP=562;FS=22.627;HRun=0;HaplotypeScore=87.6153;InbreedingCoeff=0.0444;MQ=43.26;MQ0=72;MQRankSum=-3.352;QD=4.76;ReadPosRankSum=2.136;VQSLOD=0.2463;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:25:12.03:136,12,0	1/1:5,0:5:3.01:32,3,0	0/0:89,0:15:10.63:0,11,208	0/0:103,0:10:2.26:0,2,122	0/1:23,0:25:31.80:71,0,32	0/1:10,1:10:9.49:52,0,9	0/0:5,0:4:3.76:0,4,22	0/1:30,1:30:19.12:230,0,19	0/0:10,0:7:5.58:0,6,26	0/1:19,0:13:1.39:108,0,1	1/1:19,0:17:11.43:77,11,0	1/1:6,0:4:0.90:7,1,0	0/1:8,0:6:24.50:24,0,31	0/0:4,0:3:2.60:0,3,10	1/1:14,0:11:2.66:84,3,0	1/1:18,0:18:12.03:136,12,0	1/1:24,0:21:2.71:156,3,0	1/1:19,0:18:3.66:134,4,0	0/1:16,0:14:15.90:17,0,16	0/1:12,0:10:1.25:1,0,20	0/0:4,0:3:0.89:0,1,2	./.	1/1:8,0:5:2.97:20,3,0	0/1:3,0:2:0.06:0,0,0	1/1:26,0:24:26.21:256,26,0	0/1:19,2:16:23.96:169,0,24	0/1:19,1:19:8.89:74,0,9	0/1:8,0:5:1.28:1,0,12
chr10	90646705	.	GGTTTTTTTTTTTTTTT	G	4018.54	PASS	AB=0.919;AC=24;AF=0.444;AN=54;BaseQRankSum=-4.671;DP=566;FS=6.512;HRun=0;HaplotypeScore=130.1546;InbreedingCoeff=-0.2937;MQ=42.95;MQ0=76;MQRankSum=2.578;QD=9.11;ReadPosRankSum=-3.109;VQSLOD=1.3044;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:25:37.89:86,0,38	0/1:1,0:6:44.17:46,0,44	0/0:89,0:15:19:0,19,301	0/1:103,0:10:10.14:10,0,151	0/1:25,0:25:99:100,0,938	0/1:12,0:10:23.16:23,0,683	0/1:5,0:4:9.45:9,0,76	0/1:30,0:30:99:203,0,690	0/1:10,0:7:50.14:50,0,336	0/1:16,3:13:25.76:535,0,26	1/1:4,15:17:29.65:409,30,0	0/0:6,0:4:9.03:0,9,249	0/0:8,0:6:15.05:0,15,559	0/0:2,0:3:3.01:0,3,154	0/1:12,0:9:42.26:47,0,42	1/1:1,16:18:12.04:500,12,0	0/1:24,0:20:99:115,0,324	1/1:2,16:17:12.04:461,12,0	0/1:16,0:14:99:124,0,527	0/1:12,0:10:93.23:93,0,451	0/0:4,0:3:3.01:0,3,93	./.	0/0:4,0:5:3.01:0,3,63	0/0:4,0:2:2.88:0,3,62	1/1:4,21:24:26.34:1041,26,0	0/1:20,0:16:99:120,0,991	0/1:23,0:19:29.57:30,0,984	0/1:10,0:5:14.74:15,0,184
chr10	90647576	.	C	CT	5516.22	PASS	AB=0.703;AC=33;AF=0.589;AN=56;BaseQRankSum=-6.355;DP=550;FS=6.041;HRun=10;HaplotypeScore=56.7351;InbreedingCoeff=0.7802;MQ=59.20;MQ0=6;MQRankSum=-0.371;QD=15.94;ReadPosRankSum=1.760;VQSLOD=5.1374;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:61.87:0,62,562	0/0:2,0:2:5.99:0,6,49	0/1:11,0:7:9.78:10,0,18	0/0:17,0:11:5.53:0,6,68	1/1:7,9:17:23.85:224,24,0	1/1:4,22:27:47.50:538,47,0	0/1:2,12:14:0.22:198,0,0	1/1:14,14:28:33.50:330,34,0	1/1:3,12:17:26.77:253,27,0	0/0:23,0:24:40.15:0,40,323	0/0:18,0:18:20.68:0,21,172	0/1:6,18:24:4.05:301,0,4	1/1:3,15:18:26.98:263,27,0	1/1:3,12:15:5.25:262,5,0	0/0:15,0:15:38.49:0,38,314	0/0:20,0:20:38.92:0,39,319	0/0:22,0:22:53.91:0,54,440	0/0:25,1:27:38.95:0,39,515	1/1:6,8:14:27.82:261,28,0	1/1:8,17:25:14.41:347,14,0	1/1:2,12:14:24.06:256,24,0	1/1:4,16:20:33:325,33,0	1/1:4,11:15:23.85:237,24,0	1/1:5,23:28:60.15:640,60,0	0/0:19,0:20:40.96:0,41,326	1/1:7,16:23:23.46:448,23,0	1/1:6,22:27:51.43:527,51,0	1/1:2,3:5:9.02:96,9,0
chr10	90647656	.	AC	A	1912.29	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.433;DP=591;FS=0.000;HRun=4;HaplotypeScore=58.4824;InbreedingCoeff=0.9623;MQ=63.96;MQ0=5;MQRankSum=1.038;QD=28.54;ReadPosRankSum=2.499;VQSLOD=3.1246;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,1547	1/1:0,10:10:30.01:328,30,0	0/0:15,0:12:33.11:0,33,462	0/0:11,0:8:24.08:0,24,328	0/0:20,0:20:57.19:0,57,797	0/0:25,0:25:69.19:0,69,944	0/0:24,0:24:63.13:0,63,824	0/0:24,0:24:69.19:0,69,934	0/0:17,0:17:48.10:0,48,611	0/0:24,0:24:69.21:0,69,935	0/0:13,0:13:36.12:0,36,503	0/0:21,0:21:54.16:0,54,737	0/0:13,0:13:33.10:0,33,448	0/0:11,0:11:27.09:0,27,378	1/1:1,28:29:74.98:900,75,0	0/0:24,0:24:72.21:0,72,973	1/1:1,27:28:69.21:828,69,0	0/0:27,0:27:66.18:0,66,902	0/0:17,0:17:45.09:0,45,628	0/0:15,0:15:39.13:0,39,544	0/0:25,0:25:69.22:0,69,948	0/0:23,0:22:54.18:0,54,754	0/0:25,0:25:60.20:0,60,838	0/0:26,0:26:69.20:0,69,943	0/0:24,0:24:69.18:0,69,942	0/0:24,0:24:72.24:0,72,1008	0/0:32,0:31:87.25:0,87,1195	0/0:4,0:4:6.02:0,6,84
chr10	90648292	.	GTC	G	4641.75	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=3.956;DP=523;FS=0.591;HRun=0;HaplotypeScore=84.9579;InbreedingCoeff=0.4938;MQ=73.57;MQ0=9;MQRankSum=-4.233;QD=10.27;ReadPosRankSum=2.513;VQSLOD=4.4075;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:15:255,15,0	1/1:2,0:2:3:25,3,0	0/0:46,0:32:73.34:0,73,790	0/0:25,0:17:18.43:0,18,449	1/1:13,0:13:8.94:69,9,0	1/1:18,0:18:17.99:153,18,0	1/1:26,0:26:11.95:95,12,0	1/1:32,0:32:83.37:697,83,0	1/1:17,0:17:17.83:143,18,0	1/1:23,0:22:53.30:450,53,0	1/1:19,0:18:20.91:168,21,0	1/1:16,1:17:21:199,21,0	1/1:13,0:13:11.80:101,12,0	1/1:6,0:6:8.99:76,9,0	0/1:13,0:12:13.59:101,0,14	1/1:19,0:19:35.87:303,36,0	0/1:19,0:19:10.36:35,0,10	1/1:24,0:24:32.98:281,33,0	1/1:10,0:9:26.99:233,27,0	1/1:12,0:12:16.77:134,17,0	1/1:28,0:28:15:130,15,0	1/1:15,0:14:9.47:79,9,0	1/1:8,0:8:11.82:103,12,0	1/1:29,0:29:10.93:119,11,0	1/1:18,1:19:15.63:188,16,0	1/1:17,0:17:41.93:346,42,0	1/1:20,0:19:11.23:85,11,0	1/1:4,0:4:8.98:73,9,0
chr10	90648295	.	TCTCA	T	7861.20	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=0.290;DP=549;FS=2.548;HRun=0;HaplotypeScore=84.9270;InbreedingCoeff=0.4333;MQ=72.12;MQ0=10;MQRankSum=-2.748;QD=16.45;ReadPosRankSum=3.201;VQSLOD=4.5947;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:6.64:7,0,88	1/1:2,0:2:3:25,3,0	0/0:46,0:32:76.35:0,76,854	0/0:25,0:17:18.43:0,18,471	1/1:0,1:13:9.02:126,9,0	1/1:0,21:21:18.06:355,18,0	1/1:3,22:25:11.99:196,12,0	1/1:1,30:31:82.95:788,83,0	1/1:1,16:17:18.06:345,18,0	1/1:3,19:22:56.40:796,56,0	1/1:1,18:20:20.99:331,21,0	1/1:3,13:16:15.97:331,16,0	1/1:1,11:13:11.63:216,12,0	1/1:0,8:8:9.03:177,9,0	0/1:16,0:14:97.52:98,0,98	1/1:2,18:22:36.12:634,36,0	0/1:8,0:19:34.07:34,0,36	1/1:1,22:25:17.09:613,17,0	1/1:9,1:10:30.01:307,30,0	1/1:2,10:12:17.65:334,18,0	1/1:1,29:30:15.05:298,15,0	1/1:3,11:13:12.04:213,12,0	1/1:0,8:8:11.86:238,12,0	1/1:1,29:30:10.75:287,11,0	1/1:2,18:21:18.87:359,19,0	1/1:5,16:21:24.93:461,25,0	1/1:2,20:21:11.91:220,12,0	1/1:4,0:4:8.98:73,9,0
chr10	90650148	.	CAAAG	C	17483.74	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=9.816;DP=558;FS=8.057;HRun=0;HaplotypeScore=100.9809;InbreedingCoeff=0.9914;MQ=67.85;MQ0=0;MQRankSum=-4.659;QD=38.68;ReadPosRankSum=4.053;VQSLOD=4.7784;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:36:69.24:1305,69,0	0/0:8,0:8:24.08:0,24,615	0/0:19,0:17:41.84:0,42,850	0/0:16,0:14:27.29:0,27,722	1/1:3,16:18:29.93:449,30,0	1/1:0,17:17:48.16:886,48,0	1/1:3,25:28:51.07:965,51,0	1/1:2,12:14:33.07:557,33,0	1/1:3,20:23:48.16:905,48,0	1/1:2,20:22:60.15:1032,60,0	1/1:3,13:16:32.89:506,33,0	1/1:0,20:20:44.91:851,45,0	1/1:1,14:15:33.11:602,33,0	1/1:0,23:23:51.17:965,51,0	0/0:29,0:29:84.26:0,84,2135	1/1:1,20:21:45.15:851,45,0	0/0:33,0:33:90.26:0,90,2165	1/1:1,17:18:42.06:755,42,0	1/1:2,16:18:48.08:719,48,0	1/1:0,19:19:41.99:715,42,0	1/1:0,22:22:35.51:680,36,0	1/1:0,13:13:27.09:490,27,0	1/1:1,19:20:30.05:565,30,0	1/1:0,20:20:45.15:852,45,0	1/1:1,20:21:38.71:737,39,0	1/1:1,21:22:63.16:1076,63,0	1/1:1,16:17:42.14:794,42,0	1/1:1,7:8:12.04:226,12,0
chr10	90650359	.	G	GAAAAAGGA	36863.94	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.690;DP=635;FS=9.977;HRun=0;HaplotypeScore=116.7954;InbreedingCoeff=0.9326;MQ=70.40;MQ0=3;MQRankSum=-7.445;QD=65.02;ReadPosRankSum=3.426;VQSLOD=4.6764;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:31:51.98:2058,52,0	1/1:3,6:10:12.04:425,12,0	0/0:36,0:32:48.34:0,48,1056	0/0:32,0:27:45.56:0,46,883	1/1:2,19:23:51.05:1496,51,0	1/1:3,25:29:48.16:2073,48,0	1/1:1,18:19:45.15:1926,45,0	1/1:4,25:35:90.24:2490,90,0	1/1:1,14:15:24.08:1035,24,0	1/1:2,29:37:96.25:2704,96,0	1/1:3,9:13:18.06:625,18,0	1/1:2,12:15:21.07:907,21,0	1/1:0,15:16:30.10:1295,30,0	1/1:0,16:17:27.09:1165,27,0	1/1:3,14:21:20.98:901,21,0	1/1:2,19:26:30.10:1296,30,0	1/1:2,24:28:27.09:1109,27,0	1/1:3,5:10:9.03:389,9,0	1/1:1,17:24:69.20:1927,69,0	1/1:2,16:20:44.98:1333,45,0	1/1:1,8:11:15.05:648,15,0	1/1:3,22:25:53.93:1811,54,0	1/1:0,21:24:39.61:1682,40,0	1/1:4,20:24:30.02:1150,30,0	1/1:1,18:22:36.12:1554,36,0	1/1:1,29:36:99:3178,102,0	1/1:4,18:25:21.07:907,21,0	1/1:0,9:9:18.06:778,18,0
chr10	90653008	.	CCTTGCGCTTGCTAGGCAAGCGCT	C	711.64	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=1.763;DP=320;FS=1.816;HRun=0;HaplotypeScore=161.0129;InbreedingCoeff=0.6003;MQ=38.57;MQ0=15;MQRankSum=-2.141;QD=54.74;ReadPosRankSum=0.571;VQSLOD=3.2746;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,8:13:15.05:799,15,0	0/0:3,0:3:8.99:0,9,327	./.	./.	0/0:7,0:6:8.94:0,9,86	0/0:12,0:12:20.94:0,21,1564	0/0:19,0:13:29.97:0,30,2323	0/0:23,0:18:35.84:0,36,682	0/0:16,0:15:29.82:0,30,948	0/0:11,0:11:29.84:0,30,599	0/0:9,0:8:5.98:0,6,332	0/0:11,0:10:17.89:0,18,599	0/0:9,0:8:23.92:0,24,1070	0/0:10,0:10:26.88:0,27,1103	0/0:10,0:10:29.91:0,30,1122	0/0:10,0:10:23.94:0,24,1393	0/0:31,0:31:78.11:0,78,5799	0/0:20,0:17:45.11:0,45,3968	0/0:14,0:9:21.04:0,21,1328	0/0:9,0:8:8.94:0,9,364	0/0:12,0:12:19.95:0,20,1953	0/0:8,0:7:14.86:0,15,103	0/0:9,0:9:18.36:0,18,379	0/0:8,0:7:7.69:0,8,985	0/0:11,0:11:17.89:0,18,737	0/0:21,0:21:54.04:0,54,3418	0/0:13,0:13:32.88:0,33,1442	0/0:1,0:1:3.01:0,3,282
chr10	90655690	.	GAA	G	9383	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.497;DP=524;FS=11.987;HRun=13;HaplotypeScore=77.7872;InbreedingCoeff=0.9136;MQ=67.50;MQ0=1;MQRankSum=-1.595;QD=18.51;ReadPosRankSum=2.721;VQSLOD=2.9103;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,23:30:28.67:518,29,0	1/1:2,0:15:24.39:103,24,0	0/0:9,0:9:17.32:0,17,166	0/0:6,0:7:4.84:0,5,48	1/1:5,22:28:46.67:513,47,0	1/1:0,13:15:32.75:353,33,0	1/1:3,18:22:50.78:477,51,0	1/1:5,26:31:78.07:752,78,0	1/1:1,13:15:32.64:301,33,0	1/1:3,13:16:39.05:378,39,0	1/1:7,17:25:25.05:370,25,0	1/1:5,10:15:21:204,21,0	1/1:2,10:11:24.04:233,24,0	1/1:3,13:16:36.03:349,36,0	1/1:0,0:13:27.43:119,27,0	1/1:4,16:20:41.99:407,42,0	1/1:3,0:27:60.37:261,60,0	1/1:3,11:17:23.63:315,24,0	1/1:4,11:16:23.87:276,24,0	1/1:4,11:15:26.97:261,27,0	1/1:3,13:16:27.02:262,27,0	1/1:2,19:22:38.94:428,39,0	1/1:4,14:20:40.41:413,40,0	1/1:2,11:13:30.04:290,30,0	1/1:2,17:20:47.79:448,48,0	1/1:2,22:24:60.04:575,60,0	1/1:7,19:27:47.99:466,48,0	1/1:5,12:17:26.89:311,27,0
chr10	90657282	.	GCCT	G	360.43	PASS	AB=0.861;AC=11;AF=0.196;AN=56;BaseQRankSum=7.006;DP=244;FS=15.261;HRun=0;HaplotypeScore=46.6801;InbreedingCoeff=-0.1981;MQ=80.47;MQ0=0;MQRankSum=-3.056;QD=3.96;ReadPosRankSum=7.181;VQSLOD=-0.2120;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:30:0,30,333	0/0:2,0:2:5.99:0,6,68	0/0:11,0:9:19.75:0,20,215	0/0:11,0:10:17.34:0,17,183	0/0:20,0:20:9.54:0,10,273	0/0:12,0:12:11.21:0,11,171	0/1:12,3:15:36.70:37,0,170	0/0:20,0:20:28.14:0,28,414	0/1:6,3:9:47.78:128,0,48	0/0:7,0:7:11.99:0,12,125	0/0:6,0:6:15.02:0,15,197	0/0:6,0:6:17.99:0,18,153	0/0:5,0:5:11.74:0,12,87	0/1:5,1:6:3.44:78,0,3	0/0:3,0:3:8.95:0,9,69	0/0:5,0:5:14.53:0,15,182	0/0:14,0:14:32.68:0,33,419	0/0:8,0:8:20.98:0,21,241	0/0:9,0:9:7.34:0,7,169	0/1:7,0:7:26.70:27,0,38	0/1:5,1:6:20.76:21,0,65	0/1:4,0:4:1.53:2,0,36	0/1:7,2:9:24.55:25,0,63	0/1:13,3:16:99:103,0,102	0/0:3,0:3:9.01:0,9,111	0/1:9,1:10:30.39:30,0,79	0/1:5,1:6:37.57:38,0,76	0/1:2,0:3:15.66:16,0,17
chr10	90659059	.	C	CA	2056.56	PASS	AB=0.916;AC=41;AF=0.759;AN=54;BaseQRankSum=-0.805;DP=470;FS=2.440;HRun=16;HaplotypeScore=75.8284;InbreedingCoeff=0.0643;MQ=41.46;MQ0=28;MQRankSum=-0.934;QD=4.74;ReadPosRankSum=1.605;VQSLOD=2.0382;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:21:11.05:36,0,11	0/1:11,0:9:0.11:0,0,9	0/0:7,0:1:2.92:0,3,17	./.	0/1:21,1:19:27.99:70,0,28	1/1:13,2:13:2:68,2,0	0/1:15,0:14:17.60:37,0,18	1/1:21,3:21:10.56:164,11,0	1/1:11,1:12:14.15:86,14,0	1/1:21,0:18:17.01:82,17,0	1/1:24,0:22:5.62:94,6,0	1/1:14,0:14:19.94:110,20,0	1/1:13,0:13:23.27:140,23,0	1/1:12,0:12:9.47:39,9,0	0/1:7,0:6:0.24:4,0,0	1/1:11,1:10:10.98:49,11,0	1/1:29,0:25:4.42:10,4,0	1/1:30,0:27:25.62:189,26,0	1/1:21,3:24:1.63:178,2,0	1/1:11,3:14:17.37:143,17,0	0/1:2,7:9:10.23:18,0,10	0/1:16,0:15:4.34:83,0,4	0/1:15,2:17:19.13:115,0,19	1/1:11,3:12:5.24:60,5,0	1/1:20,0:19:38.57:179,39,0	0/1:19,5:22:2.78:139,0,3	0/0:18,2:17:3.70:0,4,20	1/1:6,3:7:14.18:100,14,0
chr10	90659072	.	A	AG	2674.72	PASS	AB=0.837;AC=19;AF=0.339;AN=56;BaseQRankSum=-5.050;DP=479;FS=8.614;HRun=0;HaplotypeScore=62.1781;InbreedingCoeff=0.7506;MQ=47.17;MQ0=24;MQRankSum=0.590;QD=12.62;ReadPosRankSum=5.629;VQSLOD=3.4607;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:17:0.16:87,0,0	0/0:10,0:8:14.87:0,15,113	0/0:10,0:4:6.02:0,6,68	0/0:15,0:2:3:0,3,27	0/0:18,0:15:26.02:0,26,235	0/0:14,0:12:24.01:0,24,190	0/0:14,0:13:25.50:0,26,205	0/0:26,0:25:44.68:0,45,367	0/0:11,0:10:16.44:0,16,103	1/1:13,10:19:45.62:420,46,0	1/1:1,21:22:48.03:412,48,0	1/1:3,13:16:23.65:236,24,0	1/1:1,5:14:23.64:218,24,0	0/1:2,0:12:3.84:36,0,4	0/0:6,0:5:11.87:0,12,84	1/1:3,5:7:12.03:135,12,0	0/0:28,0:24:11.82:0,12,77	1/1:3,24:24:42.12:475,42,0	0/0:26,0:24:40.33:0,40,363	0/0:16,0:16:31.47:0,31,242	0/0:10,0:10:12.80:0,13,103	1/1:12,8:19:49.04:396,49,0	0/0:18,0:18:26.38:0,26,259	0/0:15,0:13:4.62:0,5,50	1/1:1,17:20:41.99:453,42,0	0/1:27,1:27:7.98:8,0,284	0/0:22,0:19:29.89:0,30,252	0/0:8,0:8:10.78:0,11,55
chr10	90659075	.	AGAAAG	A	450.31	PASS	AB=0.988;AC=9;AF=0.161;AN=56;BaseQRankSum=1.742;DP=467;FS=12.366;HRun=0;HaplotypeScore=91.0453;InbreedingCoeff=0.4907;MQ=49.79;MQ0=22;MQRankSum=-6.880;QD=5.00;ReadPosRankSum=-3.943;VQSLOD=-0.2142;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:18:9.69:0,10,487	1/1:4,4:7:10.28:160,10,0	0/0:11,0:4:9.02:0,9,133	0/0:16,0:3:2.90:0,3,57	0/0:16,0:13:17.46:0,17,515	0/0:12,0:10:5.34:0,5,455	0/0:15,0:15:29.79:0,30,575	0/0:25,0:24:37.81:0,38,882	0/1:10,0:9:9.23:9,0,287	0/0:23,0:19:50.41:0,50,992	0/0:24,0:22:53:0,53,1126	0/0:16,0:16:2.92:0,3,394	0/0:16,0:16:24.82:0,25,421	0/1:12,0:12:3.54:4,0,138	1/1:4,0:6:12.09:163,12,0	0/0:7,0:6:10.89:0,11,169	1/1:5,21:23:12.04:246,12,0	0/0:28,0:26:47.82:0,48,995	0/1:25,0:24:8.61:9,0,872	0/0:15,0:15:45.15:0,45,1018	0/0:10,0:10:8.57:0,9,154	0/0:20,0:19:35.53:0,36,865	0/0:17,0:17:13.68:0,14,684	0/0:15,0:13:26.16:0,26,391	0/0:22,0:22:46.74:0,47,987	0/0:21,0:21:49.53:0,50,1091	0/0:18,0:15:18.06:0,18,422	0/0:8,0:8:17.91:0,18,353
chr10	90659091	.	A	AGAAG	497.36	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=3.392;DP=434;FS=14.125;HRun=0;HaplotypeScore=84.7105;InbreedingCoeff=0.5935;MQ=63.07;MQ0=5;MQRankSum=-2.322;QD=14.21;ReadPosRankSum=-0.719;VQSLOD=1.6293;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,4:16:38.70:591,39,0	0/0:6,0:5:9.02:0,9,115	0/0:18,0:10:16.13:0,16,201	0/1:19,0:9:4.99:5,0,148	0/0:13,0:13:36.03:0,36,499	0/0:9,0:9:27.03:0,27,354	0/0:15,0:15:32.09:0,32,393	0/0:23,0:23:62.97:0,63,787	0/0:11,0:10:24.02:0,24,254	0/0:21,0:18:11.39:0,11,176	0/0:21,0:19:37.30:0,37,288	0/0:14,0:14:15.55:0,16,162	0/0:13,0:13:20.26:0,20,144	0/0:11,0:11:11.02:0,11,65	0/0:4,0:4:9.02:0,9,103	0/0:10,0:10:23.97:0,24,207	0/0:26,0:26:25.24:0,25,249	0/0:28,0:26:47.02:0,47,361	0/0:21,0:20:41.65:0,42,633	0/0:16,0:16:48.09:0,48,656	0/0:13,0:13:15.03:0,15,175	0/0:15,0:15:24.44:0,24,212	0/0:13,0:13:39.09:0,39,534	0/0:13,0:13:32.85:0,33,300	0/0:20,0:20:43.20:0,43,305	0/0:18,0:18:53.55:0,54,685	0/0:16,0:14:21.06:0,21,317	0/0:10,0:10:30.04:0,30,330
chr10	90660229	.	C	CTTTT	4521.14	PASS	AB=0.988;AC=50;AF=0.893;AN=56;BaseQRankSum=-1.941;DP=545;FS=0.000;HRun=18;HaplotypeScore=106.3091;InbreedingCoeff=0.4017;MQ=49.96;MQ0=13;MQRankSum=-3.254;QD=8.37;ReadPosRankSum=-4.632;VQSLOD=-0.7560;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,15:37:12.80:208,13,0	0/0:5,0:5:2.89:0,3,24	0/1:19,0:8:0:0,0,0	0/1:8,0:4:0:0,0,0	1/1:27,0:28:25.56:335,26,0	1/1:26,0:27:44.75:432,45,0	1/1:9,3:14:4.83:65,5,0	1/1:17,0:22:19.01:158,19,0	1/1:10,0:10:8.97:91,9,0	1/1:26,0:25:30.21:341,30,0	1/1:25,0:22:24.17:241,24,0	1/1:17,0:17:14.08:176,14,0	1/1:14,0:14:9.29:96,9,0	1/1:17,1:16:20.45:162,20,0	0/1:26,0:26:0.34:0,0,123	1/1:16,0:17:12.88:132,13,0	0/1:31,0:30:52.98:53,0,154	1/1:20,0:18:19.30:205,19,0	1/1:14,0:14:17.86:136,18,0	1/1:14,6:20:11.25:134,11,0	1/1:6,0:7:8.25:63,8,0	1/1:17,0:17:21.01:275,21,0	1/1:14,0:14:8.05:76,8,0	1/1:17,0:23:4.84:65,5,0	1/1:20,0:20:29.82:290,30,0	1/1:27,0:27:34.49:382,34,0	1/1:20,0:19:22.47:247,22,0	1/1:8,1:8:12.01:157,12,0
chr10	90660451	.	CT	C	20144.76	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=9.049;DP=616;FS=6.361;HRun=1;HaplotypeScore=74.1203;InbreedingCoeff=0.9923;MQ=88.89;MQ0=0;MQRankSum=-6.980;QD=39.50;ReadPosRankSum=3.993;VQSLOD=5.5190;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:78.26:1091,78,0	0/0:4,0:4:12.04:0,12,192	0/0:23,0:23:69.21:0,69,1042	0/0:28,0:28:84.25:0,84,1286	1/1:0,36:36:99:1426,102,0	1/1:0,25:25:57.19:797,57,0	1/1:0,13:13:36.12:504,36,0	1/1:0,40:40:99:1645,120,0	1/1:0,19:19:48.16:671,48,0	1/1:0,23:23:69.18:927,69,0	1/1:0,18:18:51.17:713,51,0	1/1:0,27:27:81.27:1132,81,0	1/1:0,19:19:54.18:755,54,0	1/1:0,9:9:27.09:377,27,0	0/0:23,0:23:66.21:0,66,1029	1/1:0,21:21:63.21:881,63,0	0/0:28,0:28:81.25:0,81,1269	1/1:0,35:35:99:1384,99,0	1/1:0,12:12:36.12:500,36,0	1/1:0,18:18:48.16:671,48,0	1/1:0,32:32:93.31:1301,93,0	1/1:0,17:17:51.17:713,51,0	1/1:0,21:21:57.14:797,57,0	1/1:0,20:20:57.19:797,57,0	1/1:0,20:20:57.19:797,57,0	1/1:0,24:24:72.20:965,72,0	1/1:0,24:24:66.13:922,66,0	1/1:0,9:9:27.09:378,27,0
chr10	90662820	.	A	AT	11183.52	PASS	AB=0.586;AC=45;AF=0.804;AN=56;BaseQRankSum=-7.386;DP=586;FS=4.002;HRun=10;HaplotypeScore=74.2885;InbreedingCoeff=0.8537;MQ=70.18;MQ0=2;MQRankSum=0.367;QD=23.15;ReadPosRankSum=1.582;VQSLOD=5.7772;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:63.16:672,63,0	0/0:6,0:6:17.98:0,18,147	0/0:22,0:17:7.03:0,7,167	0/0:18,0:15:16.87:0,17,136	1/1:3,14:18:26.07:397,26,0	1/1:0,13:13:33.08:352,33,0	1/1:1,14:15:11.45:327,11,0	1/1:8,20:29:17.11:535,17,0	1/1:0,16:16:39.10:416,39,0	1/1:4,25:29:72.18:766,72,0	0/1:5,12:17:7.09:326,0,7	1/1:3,15:18:42.10:448,42,0	1/1:1,15:16:45.11:480,45,0	1/1:3,16:19:45.11:480,45,0	0/0:25,0:25:68.92:0,69,566	1/1:1,23:24:60.15:640,60,0	0/0:31,0:31:80.90:0,81,665	1/1:1,17:18:33.08:352,33,0	1/1:5,15:18:26.03:451,26,0	1/1:9,28:37:59.46:813,59,0	1/1:2,12:14:8.44:295,8,0	1/1:6,16:22:42.10:447,42,0	1/1:6,16:22:45.11:480,45,0	1/1:3,16:19:42.11:448,42,0	1/1:4,13:17:17.48:391,17,0	1/1:8,20:28:60.13:631,60,0	1/1:8,24:32:19.88:623,20,0	1/1:2,13:15:39.10:416,39,0
chr10	90663405	.	G	GC	1733.31	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-4.510;DP=578;FS=1.182;HRun=4;HaplotypeScore=61.2843;InbreedingCoeff=0.9404;MQ=74.41;MQ0=0;MQRankSum=-2.211;QD=27.96;ReadPosRankSum=2.271;VQSLOD=3.1441;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.21:0,96,1043	1/1:0,5:5:15.05:204,15,0	0/0:12,0:12:27.53:0,28,279	0/0:19,0:19:12.08:0,12,331	0/0:11,0:11:24.07:0,24,271	0/0:17,0:17:42.08:0,42,453	0/0:31,0:31:81.15:0,81,875	0/0:17,0:17:36.06:0,36,382	0/0:9,0:9:24.06:0,24,262	0/0:23,0:23:60.11:0,60,653	0/0:7,0:7:6.01:0,6,65	0/0:37,0:37:99:0,105,1144	0/0:20,0:20:57.16:0,57,645	0/0:29,0:29:75.09:0,75,811	1/1:4,23:27:48.16:651,48,0	0/0:22,0:22:60.17:0,60,680	1/1:3,27:30:75.25:1019,75,0	0/0:33,0:33:87.22:0,87,963	0/0:17,0:17:48.06:0,48,517	0/0:11,0:11:30.06:0,30,318	0/0:72,0:72:99:0,198,2189	0/0:7,0:7:18.05:0,18,203	0/0:10,0:10:21.04:0,21,227	0/0:29,0:29:75.20:0,75,841	0/0:14,0:14:36.08:0,36,389	0/0:12,0:12:33.09:0,33,373	0/0:15,0:15:45.11:0,45,500	0/0:8,0:8:21.04:0,21,227
chr10	90663711	.	A	AGTGTGTGT	11997.72	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.330;DP=480;FS=1.225;HRun=0;HaplotypeScore=146.6775;InbreedingCoeff=0.5859;MQ=60.04;MQ0=1;MQRankSum=-9.554;QD=28.91;ReadPosRankSum=2.907;VQSLOD=4.2246;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:18.05:406,18,0	1/1:2,3:8:15.05:487,15,0	0/0:29,0:26:58.88:0,59,1352	0/0:36,0:33:84.26:0,84,1991	1/1:14,0:14:14.94:159,15,0	1/1:13,0:13:8.47:311,8,0	1/1:23,0:23:23.64:212,24,0	1/1:17,0:15:21.68:222,22,0	1/1:17,0:17:11.96:258,12,0	1/1:17,0:16:21.79:419,22,0	1/1:9,0:10:18.86:543,19,0	1/1:21,0:21:29.37:882,29,0	1/1:16,0:16:14.49:519,14,0	1/1:12,0:12:4.19:145,4,0	1/1:1,23:26:52.17:2218,52,0	1/1:18,0:18:24.54:754,25,0	1/1:4,20:30:36.08:1356,36,0	1/1:8,0:8:6.26:288,6,0	1/1:13,0:13:6.11:389,6,0	1/1:17,0:17:5.97:206,6,0	1/1:20,0:19:6.27:40,6,0	1/1:10,0:10:12.03:336,12,0	1/1:11,0:11:6.01:129,6,0	1/1:15,0:15:8.45:175,8,0	1/1:10,0:10:5.46:305,5,0	1/1:24,0:24:9.90:687,10,0	1/1:12,0:12:5.87:197,6,0	1/1:8,0:8:15:357,15,0
chr10	90663713	.	A	AGAGAGAGTGTGTGTGTGT	13582.32	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=8.086;DP=514;FS=11.767;HRun=0;HaplotypeScore=239.1664;InbreedingCoeff=-0.3732;MQ=56.44;MQ0=1;MQRankSum=-12.398;QD=33.13;ReadPosRankSum=7.920;VQSLOD=1.5499;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,11:31:24.08:1758,24,0	1/1:9,0:9:4.13:348,4,0	0/0:28,0:26:60.67:0,61,1884	0/0:35,0:33:70.31:0,70,2828	0/0:17,0:17:11.64:0,12,144	0/1:12,0:12:47.16:544,0,47	0/1:36,0:36:99:743,0,340	0/1:23,0:20:99:420,0,448	0/1:17,0:17:99:349,0,162	0/1:18,0:16:99:502,0,122	0/1:10,0:10:99:573,0,141	0/1:19,0:19:99:887,0,275	0/1:15,0:15:40.66:612,0,41	0/1:12,0:12:99:105,0,279	0/1:28,0:28:3.09:913,0,3	1/1:17,0:17:22.32:854,22,0	1/1:31,0:31:46.68:650,47,0	0/1:7,0:7:99:382,0,106	0/1:16,0:16:99:656,0,231	0/1:17,0:17:99:343,0,105	0/0:22,0:21:11.70:0,12,208	1/1:9,0:9:9.03:353,9,0	0/1:12,0:12:43.44:146,0,43	0/1:17,0:17:99:258,0,106	0/1:10,0:10:50.21:343,0,50	0/1:24,0:24:99:1014,0,424	0/1:12,0:12:99:333,0,160	0/1:8,0:8:99:497,0,104
chr10	90663729	.	T	TGTGTGTGTGTTTGTGC	18172.52	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=6.954;DP=573;FS=11.366;HRun=0;HaplotypeScore=222.1460;InbreedingCoeff=0.3039;MQ=59.63;MQ0=1;MQRankSum=-10.944;QD=35.91;ReadPosRankSum=7.262;VQSLOD=1.9208;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:99:1299,0,123	1/1:8,0:9:4.11:238,4,0	0/0:29,0:26:71.39:0,71,1822	0/0:37,0:35:93.23:0,93,2359	1/1:15,0:15:9.02:116,9,0	1/1:0,0:12:9.03:603,9,0	1/1:34,0:34:56.02:1866,56,0	1/1:18,0:15:18.73:677,19,0	1/1:1,0:20:6.02:400,6,0	1/1:3,0:22:22.65:1028,23,0	1/1:0,0:12:15.05:776,15,0	1/1:2,0:23:24.55:1253,25,0	1/1:0,0:23:14.79:857,15,0	1/1:2,0:13:3.01:172,3,0	0/1:25,0:25:47.15:695,0,47	1/1:1,0:29:21.67:1164,22,0	0/1:25,0:25:99:485,0,108	1/1:1,0:15:9.03:542,9,0	1/1:15,0:15:18.73:903,19,0	1/1:1,0:20:6.02:392,6,0	1/1:30,0:29:30.65:387,31,0	1/1:0,0:11:6.42:471,6,0	1/1:4,1:19:3.48:221,3,0	1/1:5,0:32:9:260,9,0	1/1:1,0:13:8.94:472,9,0	1/1:1,0:22:48.15:1882,48,0	1/1:0,0:15:6.02:392,6,0	1/1:0,0:11:9.03:620,9,0
chr10	90664542	.	AAAGGAAGG	A	15606.02	PASS	AB=0.591;AC=51;AF=0.911;AN=56;BaseQRankSum=3.369;DP=498;FS=33.194;HRun=0;HaplotypeScore=129.1051;InbreedingCoeff=0.6690;MQ=55.48;MQ0=5;MQRankSum=-3.645;QD=35.63;ReadPosRankSum=4.143;VQSLOD=2.8414;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:24:27.09:503,27,0	1/1:2,7:8:15.05:379,15,0	0/0:27,0:16:15.52:0,16,477	0/0:32,0:18:12.04:0,12,329	1/1:7,10:17:24.08:579,24,0	1/1:4,14:18:33.11:833,33,0	1/1:7,16:23:24.08:599,24,0	1/1:16,16:32:45.01:984,45,0	1/1:3,21:24:54.19:1387,54,0	1/1:4,10:14:30.06:605,30,0	1/1:3,7:10:17.91:265,18,0	1/1:3,17:20:33.11:848,33,0	1/1:4,10:14:21.07:539,21,0	1/1:2,12:14:33.11:847,33,0	1/1:5,15:20:42.14:1079,42,0	1/1:8,11:19:27.04:694,27,0	1/1:10,7:17:9.03:231,9,0	0/1:4,9:13:49.32:219,0,49	1/1:15,3:17:8.97:153,9,0	1/1:3,9:12:26.98:563,27,0	1/1:4,10:14:9.03:209,9,0	1/1:5,6:11:21:439,21,0	1/1:5,8:13:14.09:384,14,0	1/1:10,9:19:11.90:308,12,0	1/1:6,7:13:15.01:328,15,0	1/1:5,19:24:54.14:1208,54,0	1/1:2,12:14:30.10:729,30,0	1/1:1,11:12:27.09:694,27,0
chr10	90665879	.	GA	G	2888.55	PASS	AB=0.787;AC=27;AF=0.500;AN=54;BaseQRankSum=4.197;DP=405;FS=17.077;HRun=10;HaplotypeScore=49.7956;InbreedingCoeff=0.6329;MQ=50.53;MQ0=34;MQRankSum=-0.035;QD=10.78;ReadPosRankSum=0.627;VQSLOD=0.9349;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:26,2:23:16.06:16,0,425	./.	0/0:6,0:2:1.55:0,2,4	0/0:9,0:3:8.61:0,9,74	1/1:3,19:21:47.89:406,48,0	1/1:3,10:13:29.63:260,30,0	1/1:5,6:9:17.99:156,18,0	1/1:12,10:19:26.92:227,27,0	1/1:5,10:11:20.99:182,21,0	0/0:14,0:15:32.92:0,33,340	0/0:12,0:11:30.07:0,30,326	0/0:20,0:18:48.02:0,48,502	0/1:8,1:9:1.87:2,0,207	0/0:13,0:10:20.97:0,21,202	0/0:4,0:3:1.25:0,1,3	0/0:23,0:24:56.92:0,57,595	0/0:2,0:1:0:0,0,0	0/0:19,0:18:33.06:0,33,348	1/1:11,11:17:29.24:220,29,0	0/1:6,12:17:6.20:181,0,6	1/1:3,10:13:9.68:168,10,0	0/0:11,0:10:21.06:0,21,232	1/1:3,17:20:32.58:284,33,0	1/1:7,15:21:29.11:353,29,0	0/1:12,2:14:1.57:2,0,195	0/1:6,10:15:3.16:204,0,3	1/1:0,10:10:20.94:182,21,0	1/1:1,10:11:26.99:234,27,0
chr10	90666034	.	CG	C	2193.39	PASS	AB=0.778;AC=53;AF=0.946;AN=56;BaseQRankSum=-0.152;DP=289;FS=0.000;HRun=2;HaplotypeScore=73.4021;InbreedingCoeff=0.3057;MQ=46.38;MQ0=18;MQRankSum=0.557;QD=7.89;ReadPosRankSum=0.152;VQSLOD=0.7146;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,1:5:8.98:73,9,0	1/1:1,0:1:2.97:20,3,0	1/1:14,0:4:2.65:7,3,0	0/0:11,0:5:5.98:0,6,64	1/1:12,0:12:23.13:139,23,0	1/1:13,0:11:12.50:53,12,0	1/1:12,0:8:15.55:80,16,0	1/1:12,0:11:25.37:161,25,0	1/1:15,0:15:34.11:171,34,0	1/1:6,1:6:11.06:64,11,0	1/1:12,1:12:29.61:162,30,0	1/1:10,0:10:19.52:89,20,0	1/1:14,1:15:10.07:49,10,0	1/1:8,4:12:18.57:109,19,0	1/1:3,0:3:2.22:7,2,0	1/1:10,9:19:32.25:163,32,0	1/1:12,1:12:16.62:160,17,0	0/1:10,4:11:22.19:50,0,22	1/1:9,0:8:21.52:109,22,0	1/1:9,0:9:20.06:103,20,0	1/1:6,0:6:4.98:18,5,0	1/1:4,4:6:5.14:24,5,0	1/1:9,0:9:7.72:46,8,0	1/1:15,0:13:18.22:118,18,0	1/1:6,2:7:16.38:110,16,0	1/1:6,0:5:14:89,14,0	1/1:11,1:11:18.69:116,19,0	1/1:3,0:1:2.60:10,3,0
chr10	90666035	.	GGA	G	1096.35	PASS	AB=0.885;AC=29;AF=0.518;AN=56;BaseQRankSum=-8.866;DP=282;FS=37.699;HRun=0;HaplotypeScore=77.7945;InbreedingCoeff=-0.0711;MQ=46.54;MQ0=17;MQRankSum=0.484;QD=4.83;ReadPosRankSum=-2.812;VQSLOD=0.2152;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,2:6:8.97:99,9,0	1/1:1,0:1:2.97:20,3,0	0/0:16,0:4:8.88:0,9,40	0/0:10,0:5:6.02:0,6,80	0/1:11,1:12:8.48:150,0,8	0/1:7,6:11:4.42:15,0,4	0/1:11,0:8:4.89:45,0,5	1/1:3,6:9:15.08:143,15,0	0/1:15,0:15:4.82:77,0,5	1/1:5,0:7:0.56:27,1,0	0/1:13,0:12:15.16:41,0,15	0/1:9,0:9:24.21:24,0,24	0/0:15,0:15:20.73:0,21,82	0/1:12,0:12:22.90:37,0,23	0/0:2,1:3:2.22:0,2,7	0/1:18,0:18:7.79:8,0,25	0/1:12,0:11:2.09:108,0,2	0/1:14,0:11:1.78:2,0,52	0/1:5,1:9:1.40:46,0,1	0/1:6,3:9:4.35:64,0,4	1/1:2,4:6:3.26:9,3,0	0/0:7,0:5:0.64:0,1,4	0/1:4,3:7:3.71:24,0,4	0/1:13,2:13:8.04:78,0,8	1/1:8,0:7:2.92:67,3,0	1/1:5,1:5:5.52:77,6,0	0/1:5,6:9:1.04:78,0,1	0/0:3,0:1:1.25:0,1,3
chr10	90666038	.	A	AAAAAG	8866.85	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.289;DP=380;FS=5.615;HRun=0;HaplotypeScore=115.7631;InbreedingCoeff=0.2499;MQ=44.12;MQ0=17;MQRankSum=-1.688;QD=24.36;ReadPosRankSum=0.847;VQSLOD=4.1043;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:9:4.20:139,0,4	1/1:4,0:4:5.98:69,6,0	0/1:20,0:4:8.60:9,0,30	0/0:16,0:7:6.54:0,7,85	1/1:12,0:12:29.93:326,30,0	1/1:14,0:12:17.99:214,18,0	1/1:15,0:13:29.40:335,29,0	1/1:15,0:15:28.93:298,29,0	1/1:18,0:18:38.60:431,39,0	1/1:13,0:12:26.16:456,26,0	1/1:18,0:18:47.54:786,48,0	1/1:10,0:10:30.03:525,30,0	1/1:11,5:16:29.71:652,30,0	1/1:14,0:14:5.45:368,5,0	1/1:7,0:6:11.87:156,12,0	1/1:26,0:26:61.05:1086,61,0	0/1:13,0:12:14.04:14,0,86	1/1:15,0:12:0.65:366,1,0	1/1:21,0:20:47.59:484,48,0	1/1:13,0:13:29.80:353,30,0	1/1:7,0:7:9.96:96,10,0	1/1:8,0:7:11.24:142,11,0	1/1:10,0:10:18.47:207,18,0	1/1:17,0:15:35.76:429,36,0	1/1:11,0:11:26.57:391,27,0	1/1:11,0:10:17.12:183,17,0	1/1:14,0:12:23.26:244,23,0	1/1:6,0:4:11.94:106,12,0
chr10	90666042	.	A	AG	1288.84	PASS	AB=0.788;AC=26;AF=0.464;AN=56;BaseQRankSum=8.213;DP=395;FS=3.446;HRun=0;HaplotypeScore=103.0451;InbreedingCoeff=-0.4890;MQ=47.95;MQ0=16;MQRankSum=-5.657;QD=3.70;ReadPosRankSum=10.060;VQSLOD=2.0853;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:10:17.77:0,18,124	0/0:4,0:4:5.90:0,6,38	0/1:25,0:9:9.29:9,0,96	0/0:18,0:7:7.75:0,8,68	0/1:6,7:13:17.32:84,0,17	0/1:9,5:12:22.52:69,0,23	0/1:8,5:12:53.23:53,0,80	0/1:19,3:22:50.81:51,0,142	1/1:6,10:16:18.91:174,19,0	0/1:11,2:12:16.97:17,0,98	0/1:11,9:18:61.25:103,0,61	0/1:5,5:10:1.83:105,0,2	0/1:5,8:13:3.61:86,0,4	0/1:11,4:15:46.89:47,0,59	0/1:6,1:6:3.79:4,0,46	0/1:17,8:25:94.05:94,0,143	0/0:12,0:11:24.66:0,25,196	0/1:7,4:9:34.23:52,0,34	0/1:18,5:22:77.10:77,0,139	0/1:9,6:15:81.99:82,0,82	0/1:7,2:9:13.52:23,0,14	0/1:9,1:8:7.45:7,0,21	0/1:6,4:10:11.71:12,0,57	1/1:9,10:17:26.11:155,26,0	0/1:9,2:10:46.69:47,0,54	0/1:10,2:11:26.18:26,0,68	0/1:11,4:13:45.82:64,0,46	0/1:6,1:5:6:6,0,43
chr10	90666050	.	A	AAAG	7123.19	PASS	AB=0.903;AC=45;AF=0.804;AN=56;BaseQRankSum=-1.284;DP=442;FS=31.095;HRun=0;HaplotypeScore=110.0120;InbreedingCoeff=0.6354;MQ=52.60;MQ0=14;MQRankSum=0.955;QD=18.94;ReadPosRankSum=3.847;VQSLOD=2.9219;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:13:17.69:0,18,131	0/0:5,0:5:11.94:0,12,93	0/0:26,0:10:9.35:0,9,90	0/0:19,0:8:13.24:0,13,128	1/1:6,8:24:30.40:401,30,0	1/1:11,5:14:19.96:219,20,0	1/1:10,5:14:38.44:353,38,0	1/1:21,3:24:55.88:470,56,0	1/1:6,10:16:32.79:406,33,0	1/1:12,0:13:29.29:232,29,0	1/1:12,0:19:20.18:409,20,0	1/1:5,0:10:27.83:314,28,0	1/1:6,0:15:23.36:392,23,0	0/1:16,0:20:0.38:326,0,0	0/1:6,0:6:28.41:38,0,28	1/1:19,0:27:14.73:533,15,0	0/1:12,0:11:26.29:26,0,92	1/1:8,0:10:9.81:241,10,0	1/1:22,4:26:46.93:539,47,0	1/1:9,6:15:35.32:396,35,0	1/1:8,2:10:22.69:228,23,0	1/1:10,0:10:17.08:144,17,0	1/1:7,4:11:20.58:185,21,0	1/1:9,10:17:32.52:375,33,0	1/1:10,0:12:6.28:167,6,0	1/1:14,2:16:33.99:317,34,0	1/1:11,3:13:27.71:287,28,0	1/1:5,1:5:14.89:124,15,0
chr10	90666100	.	CAG	C	1599.99	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=0.746;DP=527;FS=5.896;HRun=0;HaplotypeScore=112.4159;InbreedingCoeff=0.9889;MQ=50.08;MQ0=18;MQRankSum=-0.853;QD=41.03;ReadPosRankSum=1.548;VQSLOD=5.4026;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:66.21:0,66,1237	1/1:0,9:9:27.09:413,27,0	0/0:17,0:7:21.07:0,21,411	0/0:21,0:7:13.04:0,13,285	0/0:22,0:22:54.19:0,54,1040	0/0:15,0:14:42.14:0,42,811	0/0:22,0:21:45.11:0,45,830	0/0:32,0:30:84.29:0,84,1614	0/0:22,0:22:60.21:0,60,1158	0/0:15,0:15:45.11:0,45,799	0/0:15,0:15:30.10:0,30,577	0/0:16,0:16:48.16:0,48,926	0/0:15,0:15:42.14:0,42,807	0/0:20,0:20:60.21:0,60,1151	1/1:1,16:17:48.16:734,48,0	0/0:31,0:31:90.31:0,90,1734	1/1:0,13:13:39.13:596,39,0	0/0:12,0:12:30.06:0,30,541	0/0:21,0:18:39.13:0,39,751	0/0:23,0:23:66.23:0,66,1274	0/0:22,0:21:57.19:0,57,1080	0/0:13,0:13:33.11:0,33,637	0/0:18,0:18:54.19:0,54,1042	0/0:20,0:20:57.20:0,57,1098	0/0:12,0:12:36.12:0,36,694	0/0:18,0:18:54.19:0,54,1043	0/0:24,0:23:60.21:0,60,1151	0/0:17,0:17:51.17:0,51,984
chr10	90666530	.	GA	G	2835.82	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.815;DP=713;FS=5.862;HRun=1;HaplotypeScore=92.0999;InbreedingCoeff=0.9978;MQ=86.11;MQ0=0;MQRankSum=0.346;QD=34.17;ReadPosRankSum=3.944;VQSLOD=3.5212;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,117,1784	1/1:0,9:9:21.03:294,21,0	0/0:27,0:27:78.22:0,78,1203	0/0:22,0:22:60.53:0,61,885	0/0:19,0:19:57.19:0,57,911	0/0:26,0:26:78.27:0,78,1246	0/0:31,0:31:90.28:0,90,1394	0/0:35,0:35:99:0,99,1549	0/0:30,0:30:90.27:0,90,1389	0/0:27,0:27:81.26:0,81,1247	0/0:17,0:17:48.16:0,48,756	0/0:34,0:34:99:0,99,1582	0/0:13,0:13:39.13:0,39,621	0/0:8,0:8:24.07:0,24,360	1/1:0,34:34:87.29:1217,87,0	0/0:27,0:27:81.23:0,81,1257	1/1:0,40:40:99:1468,105,0	0/0:27,0:27:81.28:0,81,1287	0/0:23,0:23:66.18:0,66,1003	0/0:16,0:16:48.16:0,48,767	0/0:52,0:52:99:0,151,2378	0/0:22,0:22:60.20:0,60,959	0/0:19,0:19:57.18:0,57,887	0/0:26,0:26:78.27:0,78,1246	0/0:17,0:17:48.16:0,48,757	0/0:22,0:22:66.22:0,66,1046	0/0:30,0:30:90.29:0,90,1415	0/0:16,0:16:48.16:0,48,767
chr10	90666627	.	CGTGTGTGCAT	C	23353.13	PASS	AB=0.618;AC=51;AF=0.911;AN=56;BaseQRankSum=4.485;DP=795;FS=0.757;HRun=0;HaplotypeScore=262.5628;InbreedingCoeff=0.7904;MQ=56.32;MQ0=8;MQRankSum=-1.804;QD=33.46;ReadPosRankSum=6.070;VQSLOD=3.8512;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,27:43:9.03:275,9,0	1/1:2,6:8:15.05:411,15,0	0/0:42,0:30:36.08:0,36,1013	0/0:55,0:32:50.66:0,51,1247	1/1:8,28:36:18.06:488,18,0	1/1:2,18:20:36.12:1099,36,0	1/1:10,22:32:14.92:418,15,0	1/1:11,28:39:84.16:1457,84,0	1/1:12,19:31:33.11:990,33,0	1/1:4,23:28:63.19:1665,63,0	1/1:7,13:20:24.08:705,24,0	1/1:6,30:36:48.16:1466,48,0	1/1:3,15:18:33.11:1008,33,0	1/1:4,20:24:39.13:1158,39,0	1/1:6,25:31:51.18:1468,51,0	1/1:6,32:38:63.22:1848,63,0	1/1:19,8:27:36.57:846,37,0	1/1:9,10:19:9.03:239,9,0	1/1:7,18:25:57.06:1137,57,0	1/1:3,13:16:21.07:624,21,0	0/1:16,26:42:0.26:0,0,0	1/1:1,16:17:27.09:824,27,0	1/1:4,27:31:44.73:1372,45,0	1/1:10,19:29:6.02:183,6,0	1/1:0,23:23:18.06:550,18,0	1/1:6,28:34:72.23:1929,72,0	1/1:8,15:23:33.11:1008,33,0	1/1:4,4:8:6.02:183,6,0
chr10	90667608	.	AC	A	8072.78	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=12.471;DP=414;FS=0.477;HRun=3;HaplotypeScore=99.5835;InbreedingCoeff=0.9589;MQ=45.81;MQ0=14;MQRankSum=-6.902;QD=28.33;ReadPosRankSum=-0.164;VQSLOD=3.9994;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,108,1530	0/0:10,0:10:30.10:0,30,431	0/0:8,0:5:9.03:0,9,128	0/0:21,0:12:26.73:0,27,295	1/1:2,16:18:39.10:467,39,0	1/1:2,14:16:39.12:468,39,0	1/1:0,9:9:27.08:323,27,0	1/1:8,18:21:54.64:648,55,0	1/1:1,7:8:18.06:216,18,0	1/1:2,10:11:27.55:325,28,0	1/1:0,9:9:24.07:288,24,0	1/1:2,13:15:39.12:467,39,0	1/1:0,12:12:36.11:432,36,0	1/1:1,6:7:15.05:180,15,0	0/0:17,0:16:45.15:0,45,648	1/1:1,15:16:42.13:503,42,0	0/0:18,0:18:45.15:0,45,642	1/1:1,11:12:33.10:393,33,0	1/1:7,9:11:27.08:324,27,0	1/1:1,13:14:39.12:467,39,0	1/1:4,13:16:26.19:323,26,0	1/1:0,11:11:30.09:359,30,0	1/1:1,7:8:21.06:252,21,0	1/1:0,8:8:24.07:288,24,0	1/1:3,13:16:36.04:413,36,0	1/1:3,18:18:51.14:600,51,0	1/1:2,8:10:24.07:288,24,0	1/1:4,0:4:5.98:49,6,0
chr10	90668429	.	C	CTTTTTTTT	5581.51	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=-3.197;DP=423;FS=6.149;HRun=19;HaplotypeScore=101.8211;InbreedingCoeff=0.3915;MQ=48.23;MQ0=35;MQRankSum=1.672;QD=16.23;ReadPosRankSum=1.720;VQSLOD=0.0909;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:11:14.18:0,14,89	1/1:8,0:8:19.85:164,20,0	0/0:66,0:13:5.84:0,6,96	0/1:73,0:18:4.88:5,0,184	1/1:15,0:15:9.56:231,10,0	1/1:11,0:11:24.04:419,24,0	1/1:8,0:7:3.01:45,3,0	1/1:16,0:15:15.05:206,15,0	1/1:2,0:2:3.01:35,3,0	1/1:12,0:10:15.41:268,15,0	1/1:14,0:14:18.95:413,19,0	1/1:3,0:2:3.01:93,3,0	1/1:6,0:10:12.04:206,12,0	1/1:6,5:7:3.01:54,3,0	1/1:16,0:14:13.45:69,13,0	1/1:10,0:10:14.72:324,15,0	1/1:18,0:17:22.31:179,22,0	1/1:11,0:11:18.06:395,18,0	1/1:15,0:14:12.82:276,13,0	1/1:11,0:10:15.05:360,15,0	1/1:4,0:3:2.92:17,3,0	1/1:4,0:4:9.03:129,9,0	1/1:11,0:11:14.41:287,14,0	1/1:6,0:5:6.02:98,6,0	1/1:15,0:14:23.40:387,23,0	0/1:18,0:14:7.49:399,0,7	1/1:13,0:12:20.44:312,20,0	1/1:8,0:7:15.05:209,15,0
chr10	90668451	.	G	GGGGGGGT	5234.43	PASS	AB=0.926;AC=37;AF=0.661;AN=56;BaseQRankSum=-1.465;DP=445;FS=1.473;HRun=0;HaplotypeScore=92.5679;InbreedingCoeff=0.1700;MQ=41.78;MQ0=58;MQRankSum=-0.550;QD=20.85;ReadPosRankSum=0.002;VQSLOD=4.3987;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:14:12.53:155,13,0	0/0:8,0:8:21.03:0,21,242	0/0:81,0:7:17.98:0,18,285	0/0:76,0:20:33.08:0,33,546	1/1:14,0:11:2.74:305,3,0	0/1:8,2:9:43.64:367,0,44	1/1:11,0:9:6.02:196,6,0	1/1:14,1:12:26.85:531,27,0	1/1:3,1:4:3.01:109,3,0	1/1:12,0:12:23.73:235,24,0	1/1:16,0:16:21.61:196,22,0	1/1:4,0:3:6.02:80,6,0	1/1:5,0:6:8.83:101,9,0	1/1:8,0:5:6.02:83,6,0	0/0:9,0:6:15.02:0,15,168	1/1:8,0:6:11.76:104,12,0	0/0:20,0:17:40.32:0,40,467	0/1:12,0:12:21.38:64,0,21	0/1:9,0:7:47.24:214,0,47	0/1:14,0:9:27.47:409,0,27	1/1:2,0:2:5.85:117,6,0	1/1:5,0:6:11.93:118,12,0	0/1:10,0:9:22.77:337,0,23	0/1:9,0:5:32.32:84,0,32	1/1:11,0:11:24.06:312,24,0	0/1:14,0:9:99:353,0,124	0/1:5,6:10:59.28:535,0,59	0/1:11,2:10:97.25:228,0,97
chr10	90670433	.	A	AC	915.98	PASS	AB=0.909;AC=39;AF=0.750;AN=52;BaseQRankSum=-1.338;DP=165;FS=2.850;HRun=10;HaplotypeScore=45.2994;InbreedingCoeff=0.3307;MQ=79.17;MQ0=0;MQRankSum=-3.490;QD=6.74;ReadPosRankSum=1.111;VQSLOD=0.8240;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:14:3.97:50,0,4	0/1:3,0:3:0:0,0,0	0/0:10,0:11:5:0,5,76	0/0:15,0:13:7.72:0,8,45	1/1:2,0:4:2.69:14,3,0	1/1:2,0:3:5.77:32,6,0	1/1:8,1:11:12.94:85,13,0	0/1:7,0:7:0:0,0,0	0/1:1,9:10:0.58:200,0,1	0/1:3,0:3:0:0,0,0	./.	1/1:2,0:2:2.88:15,3,0	1/1:2,0:2:2.03:5,2,0	1/1:7,0:7:2.13:5,2,0	1/1:2,2:4:3.01:32,3,0	0/1:4,0:4:0:1,0,0	1/1:3,9:12:21.05:221,21,0	./.	1/1:5,1:6:6:57,6,0	1/1:4,0:4:2.92:17,3,0	1/1:5,0:9:5.74:31,6,0	0/0:1,0:1:0:0,0,0	1/1:5,0:5:5.78:32,6,0	1/1:7,1:10:11.61:78,12,0	0/1:3,0:3:0:0,0,0	1/1:4,1:6:5.85:46,6,0	1/1:3,1:5:12.64:89,13,0	1/1:0,0:1:2.84:14,3,0
chr10	90670483	.	CT	C	1119.31	PASS	AB=0.701;AC=24;AF=0.429;AN=56;BaseQRankSum=-1.329;DP=355;FS=3.181;HRun=13;HaplotypeScore=58.3726;InbreedingCoeff=0.5070;MQ=62.86;MQ0=15;MQRankSum=3.023;QD=8.68;ReadPosRankSum=2.389;VQSLOD=2.7829;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,7:14:35.20:225,35,0	0/1:4,1:5:9.78:10,0,75	0/0:55,0:19:9.84:0,10,143	0/0:54,0:20:14.89:0,15,93	1/1:5,3:8:16.94:115,17,0	1/1:6,8:14:5.26:179,5,0	1/1:3,6:9:20.83:149,21,0	0/1:6,2:8:3.78:53,0,4	1/1:10,2:12:7.19:93,7,0	0/0:9,0:15:28.79:0,29,161	0/0:4,0:9:18.41:0,18,94	0/0:2,0:6:7.19:0,7,31	0/0:5,0:5:11.76:0,12,81	0/0:1,0:5:11.52:0,12,66	0/0:8,0:8:20.36:0,20,141	0/0:3,0:9:8.59:0,9,44	0/0:30,0:28:48.32:0,48,418	0/0:2,0:8:14.20:0,14,71	1/1:5,6:10:14.44:109,14,0	0/1:2,2:5:15.24:53,0,15	1/1:4,2:6:13.97:98,14,0	0/0:0,0:4:11.40:0,11,58	1/1:1,2:3:5.20:29,5,0	0/1:4,3:6:16.73:35,0,17	0/0:5,0:7:15.24:0,15,79	0/1:4,3:7:7.20:51,0,7	0/1:3,5:9:5.27:73,0,5	1/1:3,2:5:5.96:44,6,0
chr10	90670506	.	TTC	T	1764.12	PASS	AB=0.988;AC=29;AF=0.518;AN=56;BaseQRankSum=1.173;DP=418;FS=8.809;HRun=0;HaplotypeScore=64.1300;InbreedingCoeff=0.3725;MQ=42.90;MQ0=28;MQRankSum=1.302;QD=6.10;ReadPosRankSum=-3.701;VQSLOD=0.6468;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:19:31.43:198,31,0	1/1:5,2:6:8.31:122,8,0	0/1:42,0:13:4.11:4,0,76	0/0:45,0:10:1.82:0,2,40	1/1:19,0:15:21.42:129,21,0	1/1:17,0:16:15.73:189,16,0	1/1:11,1:12:16.59:173,17,0	0/1:19,0:17:0.19:156,0,0	1/1:13,1:14:21.20:204,21,0	0/0:17,0:14:32.46:0,32,230	0/0:13,0:12:19.05:0,19,251	0/0:7,0:6:5.64:0,6,37	0/0:8,0:7:10.50:0,11,52	0/0:10,0:10:14.37:0,14,151	0/1:15,0:15:4.59:106,0,5	0/0:9,0:9:17.92:0,18,183	0/1:34,1:32:27.32:169,0,27	0/0:15,0:14:5.17:0,5,219	0/1:14,0:13:2.23:52,0,2	1/1:6,1:6:4.60:76,5,0	1/1:6,0:6:13.21:101,13,0	0/0:5,0:5:8.79:0,9,76	1/1:8,0:5:11.90:87,12,0	0/1:9,0:8:0.61:14,0,1	0/1:13,0:9:7.51:8,0,130	0/1:10,1:11:12.50:76,0,13	0/1:13,0:12:28.11:28,0,37	1/1:5,0:5:8.21:56,8,0
chr10	90670507	.	TC	T	2756.01	PASS	AB=0.992;AC=37;AF=0.661;AN=56;BaseQRankSum=1.306;DP=413;FS=4.031;HRun=1;HaplotypeScore=57.2436;InbreedingCoeff=0.5834;MQ=41.26;MQ0=29;MQRankSum=2.079;QD=9.44;ReadPosRankSum=-0.141;VQSLOD=1.0566;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,4:17:39.50:307,40,0	1/1:6,1:6:14.31:108,14,0	0/1:38,1:12:9.22:9,0,68	0/0:42,2:9:1.83:0,2,37	1/1:16,3:15:34.04:236,34,0	1/1:17,0:16:41.66:305,42,0	1/1:12,0:12:28.17:226,28,0	1/1:18,1:17:20.75:238,21,0	1/1:12,2:14:33.42:226,33,0	0/0:17,0:14:18.07:0,18,159	0/0:13,0:12:3.90:0,4,152	0/0:7,0:6:5.59:0,6,33	0/1:8,0:7:4.84:5,0,23	0/0:10,0:10:13.53:0,14,113	1/1:15,1:15:29.26:178,29,0	0/0:9,0:9:12.28:0,12,105	1/1:35,0:32:38.76:353,39,0	0/0:15,0:14:1.51:0,2,137	1/1:12,0:11:14.77:94,15,0	1/1:6,1:6:16.12:109,16,0	1/1:6,0:6:17.90:139,18,0	0/0:6,0:6:5.53:0,6,48	1/1:8,0:5:11.90:87,12,0	1/1:9,0:8:5.33:27,5,0	0/1:14,0:10:12.37:12,0,98	1/1:11,0:11:3.08:114,3,0	1/1:13,0:12:9.28:81,9,0	1/1:4,1:5:9:85,9,0
chr10	90670868	.	CCT	C	6030.99	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-7.186;DP=606;FS=3.033;HRun=0;HaplotypeScore=97.6734;InbreedingCoeff=0.9963;MQ=62.18;MQ0=4;MQRankSum=4.234;QD=33.32;ReadPosRankSum=2.449;VQSLOD=7.3677;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,2375	0/0:6,0:5:15.05:0,15,270	0/0:23,0:17:45.14:0,45,772	0/0:16,0:15:42.13:0,42,702	0/0:23,0:23:63.20:0,63,1101	0/0:27,0:27:81.26:0,81,1423	0/0:28,0:28:78.24:0,78,1342	0/0:28,0:28:75.25:0,75,1322	0/0:23,0:23:54.19:0,54,971	1/1:0,25:25:66.22:921,66,0	1/1:2,18:20:42.03:562,42,0	1/1:2,23:25:63.21:882,63,0	1/1:0,19:19:48.16:672,48,0	1/1:0,19:19:42.14:587,42,0	0/0:19,0:19:48.16:0,48,863	1/1:1,25:26:60.20:835,60,0	0/0:28,0:28:81.26:0,81,1406	1/1:0,22:21:57.12:774,57,0	0/0:23,0:23:60.20:0,60,1052	0/0:12,0:12:36.12:0,36,645	0/0:35,0:35:99:0,99,1753	1/1:1,9:10:21.07:294,21,0	0/0:11,0:10:27.08:0,27,454	0/0:27,0:27:75.24:0,75,1319	1/1:1,14:15:36.12:504,36,0	0/0:22,1:23:27.21:0,27,1095	0/0:17,0:17:45.15:0,45,807	0/0:10,0:10:27.09:0,27,473
chr10	90671047	.	ATCTT	A	441.92	PASS	AB=0.860;AC=7;AF=0.125;AN=56;BaseQRankSum=3.064;DP=374;FS=46.276;HRun=0;HaplotypeScore=49.5034;InbreedingCoeff=0.0322;MQ=41.95;MQ0=52;MQRankSum=0.746;QD=6.31;ReadPosRankSum=-1.900;VQSLOD=-0.1222;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:26:65.78:0,66,1314	1/1:3,3:5:3.53:121,4,0	0/0:19,0:5:14.97:0,15,211	0/0:15,0:3:5.46:0,5,48	0/1:10,0:7:45.79:46,0,222	0/0:12,0:7:12.04:0,12,201	0/0:10,0:8:12.04:0,12,256	0/0:18,0:15:42.10:0,42,961	0/0:4,0:2:6.02:0,6,101	0/0:21,0:21:60.15:0,60,1232	0/0:12,0:12:28.65:0,29,594	0/0:13,0:13:25.86:0,26,526	0/0:9,0:9:27.07:0,27,526	0/0:17,0:17:39:0,39,869	0/1:6,3:8:99:102,0,259	0/0:11,0:10:27.08:0,27,561	0/1:8,5:12:44.24:44,0,327	0/0:24,0:21:54.19:0,54,1153	0/0:17,0:6:11.99:0,12,270	0/0:3,0:3:8.78:0,9,91	0/0:11,2:5:6.02:0,6,139	0/0:11,0:11:21.04:0,21,462	0/0:11,0:11:13.59:0,14,197	0/0:5,0:4:2.45:0,2,65	0/0:13,0:12:21.04:0,21,442	0/1:15,4:15:99:157,0,727	0/0:17,0:13:24.07:0,24,471	0/1:13,0:9:98.86:99,0,227
chr10	90671412	.	CT	C	1610.53	PASS	AB=0.826;AC=33;AF=0.589;AN=56;BaseQRankSum=-5.793;DP=542;FS=5.865;HRun=15;HaplotypeScore=75.5719;InbreedingCoeff=-0.0187;MQ=62.84;MQ0=17;MQRankSum=1.559;QD=3.86;ReadPosRankSum=4.146;VQSLOD=0.8300;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:22,6:31:30.18:30,0,337	0/1:2,2:4:13.28:13,0,14	0/0:48,0:19:11.37:0,11,66	0/0:29,0:10:9.41:0,9,95	0/1:6,5:9:21.79:27,0,22	1/1:4,3:8:10.83:63,11,0	1/1:14,1:20:6.03:101,6,0	1/1:6,16:22:19.02:208,19,0	1/1:9,7:15:11.59:77,12,0	0/1:16,2:18:18.39:37,0,18	0/0:18,1:19:11.80:0,12,138	0/1:15,0:15:12.21:12,0,36	0/0:11,0:10:2.29:0,2,47	0/1:19,1:20:37.22:55,0,37	0/1:13,4:21:23.68:87,0,24	0/1:13,0:13:5.28:5,0,49	0/1:16,21:40:51.11:177,0,51	0/1:27,1:28:45.63:46,0,84	0/1:14,5:19:3.26:62,0,3	1/1:2,5:7:14.53:86,15,0	0/1:4,8:14:7.55:70,0,8	0/0:15,0:16:25.54:0,26,145	1/1:5,3:10:16.74:90,17,0	1/1:15,29:49:9.66:241,10,0	0/1:18,0:17:23.45:23,0,34	1/1:5,10:15:1.99:138,2,0	1/1:6,9:15:15.05:97,15,0	1/1:0,2:2:5.91:38,6,0
chr10	90672408	.	TACACAAACACACACAC	T	3426.99	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=7.867;DP=444;FS=6.534;HRun=0;HaplotypeScore=165.0894;InbreedingCoeff=0.0549;MQ=48.42;MQ0=13;MQRankSum=-5.609;QD=17.76;ReadPosRankSum=5.319;VQSLOD=1.9558;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:26:56.65:57,0,885	1/1:1,6:8:15.05:670,15,0	0/0:28,0:14:28.19:0,28,488	0/0:28,0:13:26.95:0,27,254	0/0:12,0:11:14.96:0,15,397	0/0:11,0:10:17.92:0,18,327	0/0:16,0:14:24.81:0,25,541	0/0:20,0:16:39.03:0,39,469	0/0:13,0:13:23.97:0,24,366	0/1:13,0:13:65.99:66,0,160	0/1:18,0:18:99:515,0,138	0/1:18,0:18:99:244,0,178	0/1:8,0:8:78.94:79,0,91	0/1:5,0:5:77.86:78,0,86	1/1:1,17:18:9.03:415,9,0	0/1:15,0:14:99:426,0,121	1/1:5,18:23:3.01:138,3,0	0/1:19,0:18:99:322,0,149	0/0:21,0:18:16.11:0,16,1266	0/0:14,0:14:20.17:0,20,308	0/0:24,0:23:35.47:0,35,983	0/1:12,0:12:99:159,0,109	0/0:8,0:8:17.24:0,17,384	0/0:21,0:20:35.71:0,36,960	0/1:9,0:9:58.89:258,0,59	0/0:14,0:14:30.08:0,30,1215	0/0:15,0:15:39.04:0,39,1230	0/0:6,0:5:9.02:0,9,358
chr10	90672414	.	AACACACACACACACACACAC	A	4846.19	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=5.804;DP=411;FS=15.913;HRun=0;HaplotypeScore=168.0113;InbreedingCoeff=0.7564;MQ=47.59;MQ0=13;MQRankSum=-5.601;QD=31.67;ReadPosRankSum=4.584;VQSLOD=2.3176;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:29.87:0,30,1605	1/1:7,0:7:15.05:279,15,0	0/0:31,0:14:15.03:0,15,391	0/0:26,0:9:3.01:0,3,34	0/0:12,0:11:6.96:0,7,494	0/0:11,0:10:6.02:0,6,295	0/0:15,0:13:9.90:0,10,530	0/0:17,0:15:15.05:0,15,598	0/0:11,0:11:8.99:0,9,297	1/1:7,4:11:12.04:279,12,0	1/1:8,9:17:17.69:967,18,0	1/1:9,7:16:9.03:484,9,0	1/1:5,3:8:3.01:161,3,0	1/1:4,2:6:3.01:161,3,0	1/1:17,0:17:9.03:144,9,0	1/1:8,7:14:16.41:811,16,0	1/1:19,0:19:3.01:49,3,0	1/1:8,10:17:15.05:703,15,0	0/0:18,0:15:24.08:0,24,1536	0/0:14,0:14:3.48:0,3,223	0/0:23,0:21:20.04:0,20,1189	1/1:5,5:10:5.69:322,6,0	0/0:7,0:7:5.55:0,6,405	0/0:19,0:18:20.81:0,21,1145	1/1:4,5:9:9.03:484,9,0	0/0:10,0:10:24.08:0,24,1658	0/0:15,0:15:27.56:0,28,1601	0/0:7,0:6:9.03:0,9,528
chr10	90675030	.	A	AAAAG	2233.94	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=7.991;DP=455;FS=4.623;HRun=0;HaplotypeScore=113.6024;InbreedingCoeff=-0.7198;MQ=63.90;MQ0=10;MQRankSum=-8.454;QD=5.27;ReadPosRankSum=1.231;VQSLOD=1.4264;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:27:61.18:223,0,61	1/1:1,0:6:1.93:109,2,0	0/0:31,0:13:32.78:0,33,266	0/1:26,0:9:17.81:18,0,73	0/1:19,0:19:58.96:88,0,59	0/1:13,0:13:67.11:67,0,90	0/1:12,0:12:36.38:36,0,76	0/1:27,0:26:99:143,0,182	0/1:11,0:11:38.99:50,0,39	0/1:17,0:16:58.12:58,0,100	0/1:20,0:20:85.46:177,0,85	0/1:17,0:17:36.95:37,0,99	0/1:14,0:14:73.54:74,0,84	0/1:6,0:6:22.16:32,0,22	1/1:7,0:10:17.80:235,18,0	0/1:17,0:17:47.55:64,0,48	1/1:3,10:18:6.02:138,6,0	0/1:8,0:6:16.51:17,0,25	0/1:23,0:22:95.58:96,0,133	0/1:11,0:11:13.90:14,0,85	0/1:8,0:8:5.58:6,0,78	0/1:11,0:11:14.20:14,0,110	0/1:14,0:14:46.72:117,0,47	0/1:11,0:10:8.03:56,0,8	0/1:25,0:24:99:156,0,166	0/1:19,0:19:97.89:105,0,98	0/1:24,0:23:73.36:248,0,73	0/1:9,0:8:10:10,0,127
chr10	90675699	.	ATCTCTCCAGCCCAGG	A	1334.64	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.548;DP=547;FS=14.738;HRun=0;HaplotypeScore=213.6076;InbreedingCoeff=0.9640;MQ=64.05;MQ0=1;MQRankSum=-5.427;QD=49.43;ReadPosRankSum=0.607;VQSLOD=1.9773;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,19:26:33.11:1429,33,0	0/0:8,0:8:24.08:0,24,1396	0/0:24,0:22:63.22:0,63,3654	0/0:21,0:18:42.49:0,42,2579	0/0:14,0:14:39.12:0,39,2657	0/0:25,0:25:69.18:0,69,4248	0/0:21,0:21:60.21:0,60,4172	0/0:32,0:31:87.28:0,87,5365	0/0:17,0:17:48.16:0,48,3479	0/0:18,0:18:48.15:0,48,3095	0/0:13,0:13:36.12:0,36,2501	0/0:19,0:18:45.15:0,45,2902	0/0:17,0:17:51.13:0,51,2955	0/0:15,0:15:42.13:0,42,2709	0/0:21,0:21:54.19:0,54,3659	0/0:19,0:19:54.19:0,54,3671	0/0:40,0:40:99:0,114,7460	0/0:15,0:15:45.15:0,45,3245	0/0:20,0:20:60.21:0,60,4213	0/0:19,0:19:54.19:0,54,3811	0/0:39,0:39:99:0,108,7037	0/0:8,0:8:24.08:0,24,1611	0/0:4,0:4:12.04:0,12,871	0/0:28,0:28:81.23:0,81,5159	0/0:13,0:13:39.13:0,39,2796	0/0:24,0:24:63.22:0,63,4274	0/0:17,0:17:45.15:0,45,3119	0/0:8,0:8:24.08:0,24,1552
chr10	90675958	.	T	TTTTTC	1782.08	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-0.382;DP=282;FS=7.189;HRun=0;HaplotypeScore=64.1515;InbreedingCoeff=0.2804;MQ=65.89;MQ0=2;MQRankSum=-2.478;QD=14.61;ReadPosRankSum=-2.651;VQSLOD=1.3485;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:11.95:0,12,168	1/1:2,3:5:6.02:171,6,0	0/1:14,0:7:20.96:21,0,45	0/1:31,0:13:7.12:7,0,56	0/0:5,0:5:12.04:0,12,213	0/0:11,0:11:21.05:0,21,350	0/0:8,0:8:12.04:0,12,224	0/0:15,0:15:30.08:0,30,474	0/0:4,0:4:6:0,6,73	0/0:4,0:4:9.03:0,9,168	0/0:6,0:6:6.02:0,6,112	0/0:5,0:5:6.01:0,6,81	0/0:8,0:8:8.96:0,9,130	0/0:8,0:8:12.04:0,12,219	1/1:5,10:15:21.07:596,21,0	0/0:12,0:12:18.01:0,18,263	1/1:19,8:25:37.68:1033,38,0	0/0:15,0:15:30.10:0,30,539	0/1:10,0:10:2.78:3,0,312	0/1:10,0:10:8.66:9,0,390	0/0:7,0:6:6.02:0,6,112	0/0:1,0:1:3.01:0,3,45	0/0:3,0:3:3.01:0,3,56	0/0:10,0:9:8.90:0,9,129	0/0:6,0:5:3.01:0,3,56	0/0:10,0:10:15.05:0,15,280	0/1:10,0:10:91.96:92,0,94	0/0:8,0:8:15.05:0,15,272
chr10	90676009	.	TC	T	1562.08	PASS	AC=44;AF=0.815;AN=54;BaseQRankSum=0.177;DP=237;FS=1.574;HRun=1;HaplotypeScore=40.9183;InbreedingCoeff=0.6473;MQ=48.09;MQ0=10;MQRankSum=-2.629;QD=11.32;ReadPosRankSum=-2.034;VQSLOD=1.0773;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:12:23.32:143,23,0	0/0:2,0:2:5.69:0,6,30	0/0:29,0:5:10.16:0,10,44	0/0:31,0:9:3.46:0,3,68	1/1:2,0:2:3:26,3,0	1/1:12,0:11:23.01:162,23,0	1/1:6,0:3:5.90:39,6,0	1/1:12,0:9:19.93:139,20,0	1/1:1,0:1:0.89:2,1,0	1/1:0,5:5:11.66:78,12,0	1/1:5,0:5:11.90:85,12,0	1/1:3,0:3:8.34:47,8,0	1/1:4,0:3:8.59:49,9,0	1/1:4,0:4:8.01:52,8,0	0/0:9,0:9:8.86:0,9,112	1/1:2,0:2:3.92:14,4,0	0/0:28,0:27:58.50:0,58,597	1/1:11,0:9:22.44:148,22,0	1/1:8,0:8:17.67:113,18,0	1/1:6,0:5:11.74:87,12,0	1/1:4,0:3:8.83:59,9,0	./.	1/1:1,0:1:3:27,3,0	1/1:6,0:4:10.98:71,11,0	1/1:5,0:4:7:34,7,0	1/1:1,13:14:34.75:213,35,0	1/1:11,0:10:16.05:86,16,0	1/1:2,0:2:5.94:41,6,0
chr10	90676283	.	GA	G	221.26	PASS	AC=2;AF=0.040;AN=50;BaseQRankSum=-0.685;DP=197;FS=1.184;HRun=10;HaplotypeScore=31.1412;InbreedingCoeff=0.2897;MQ=55.67;MQ0=11;MQRankSum=-1.020;QD=11.06;ReadPosRankSum=1.701;VQSLOD=1.6497;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:19:35.97:312,36,0	0/0:3,0:3:9.02:0,9,99	0/0:12,0:3:7.06:0,7,46	0/0:14,2:9:14.51:0,15,127	0/0:4,0:3:6.02:0,6,66	0/0:7,0:5:5.23:0,5,41	0/0:7,0:5:13.24:0,13,122	0/0:17,0:14:26.92:0,27,298	0/0:1,0:1:3.01:0,3,33	0/0:3,0:2:3.01:0,3,33	0/0:1,0:1:3:0,3,26	0/0:4,0:4:9.02:0,9,100	0/0:3,0:3:6.02:0,6,66	0/0:2,0:2:5.85:0,6,48	0/0:11,0:11:27.06:0,27,291	0/0:4,0:3:3.01:0,3,33	0/0:34,0:33:84.21:0,84,919	0/0:19,0:19:30.04:0,30,318	0/0:5,0:4:12.03:0,12,132	./.	0/0:3,0:3:3.01:0,3,33	./.	0/0:1,0:1:3.01:0,3,33	0/0:10,0:7:12.03:0,12,132	0/0:2,0:2:3.01:0,3,33	0/0:5,0:3:9.02:0,9,100	0/0:1,0:1:0:0,0,0	./.
chr10	90676372	.	CA	C	1419.51	PASS	AC=20;AF=0.417;AN=48;BaseQRankSum=6.700;DP=214;FS=7.013;HRun=1;HaplotypeScore=38.9051;InbreedingCoeff=0.8371;MQ=59.95;MQ0=2;MQRankSum=-4.091;QD=30.20;ReadPosRankSum=0.415;VQSLOD=2.7255;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:15.05:198,15,0	0/0:2,0:2:6.02:0,6,96	0/0:10,0:10:30.04:0,30,415	0/0:11,0:8:7.43:0,7,173	1/1:0,1:1:3.01:41,3,0	1/1:0,6:4:9.03:125,9,0	1/1:0,4:4:12.04:167,12,0	1/1:0,3:2:6.02:83,6,0	./.	0/0:11,0:11:33.11:0,33,528	0/0:3,0:3:6.02:0,6,96	0/0:15,0:15:36.12:0,36,574	0/0:13,0:13:33.11:0,33,525	0/0:9,0:9:27.09:0,27,430	0/0:15,0:15:42.14:0,42,669	0/0:8,0:8:21.07:0,21,335	0/0:32,1:32:93.28:0,93,1437	0/0:18,0:18:36.12:0,36,566	./.	./.	1/1:0,3:3:9.03:125,9,0	0/0:7,0:7:21.07:0,21,334	1/1:0,1:1:3.01:35,3,0	./.	0/0:8,0:8:21.07:0,21,334	1/1:0,5:3:9.03:124,9,0	1/1:0,10:10:30.10:413,30,0	1/1:0,7:7:21.07:292,21,0
chr10	90677482	.	G	GTTAGGCC	21369.50	PASS	AB=0.796;AC=25;AF=0.446;AN=56;BaseQRankSum=12.831;DP=614;FS=0.662;HRun=0;HaplotypeScore=237.3909;InbreedingCoeff=0.0217;MQ=49.60;MQ0=10;MQRankSum=-16.817;QD=44.24;ReadPosRankSum=-0.916;VQSLOD=4.3480;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.21:0,66,1657	0/0:6,0:6:15.05:0,15,389	0/0:18,0:16:43.39:0,43,1051	0/0:27,0:23:63.19:0,63,1494	0/0:13,0:12:33.11:0,33,857	0/1:20,11:30:99:1027,0,1076	0/1:24,3:27:99:581,0,1217	0/1:30,6:35:99:813,0,1913	0/1:29,11:40:99:1207,0,1912	1/1:10,12:22:63.17:2115,63,0	1/1:4,6:9:24.08:927,24,0	0/1:17,14:32:99:1888,0,844	0/1:19,13:33:99:1806,0,922	0/1:13,18:32:99:2444,0,455	0/1:40,4:43:99:250,0,2780	1/1:4,23:28:69.24:2748,69,0	0/0:25,1:26:27.27:0,27,1513	1/1:1,9:8:24.08:958,24,0	0/1:20,6:26:99:675,0,1006	0/0:2,0:2:6.02:0,6,156	0/1:16,3:18:99:259,0,1055	1/1:6,11:16:42.14:1579,42,0	0/0:12,0:11:27.09:0,27,694	0/1:14,6:20:99:579,0,505	1/1:2,4:6:18.06:672,18,0	0/1:16,7:23:99:774,0,968	0/1:19,1:19:67.56:68,0,1098	0/0:3,0:3:3.01:0,3,78
chr10	90677508	.	C	CATATGGT	19214.30	PASS	AB=0.776;AC=24;AF=0.462;AN=52;BaseQRankSum=2.675;DP=522;FS=6.103;HRun=0;HaplotypeScore=287.4536;InbreedingCoeff=0.0597;MQ=79.03;MQ0=1;MQRankSum=-15.215;QD=50.97;ReadPosRankSum=3.821;VQSLOD=3.8960;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.32:0,93,2416	0/0:9,0:9:21.07:0,21,566	0/0:24,0:24:69.21:0,69,1742	0/0:33,0:33:96.32:0,96,2287	0/0:4,0:4:12.04:0,12,195	0/1:15,9:23:99:913,0,359	0/1:10,1:11:99:101,0,214	0/0:12,0:11:27.08:0,27,396	0/1:23,10:33:99:1158,0,893	1/1:6,17:23:66.23:2430,66,0	1/1:2,5:7:15.05:611,15,0	0/1:15,16:30:99:2074,0,540	0/1:15,15:33:99:2135,0,632	0/1:14,14:28:99:1925,0,260	0/1:36,6:41:99:477,0,2412	1/1:11,20:31:81.27:2917,81,0	0/0:26,0:26:78.27:0,78,2036	1/1:3,7:9:24.08:883,24,0	0/1:10,5:15:54.34:690,0,54	./.	0/1:12,1:12:95.35:95,0,228	1/1:7,12:18:24.08:943,24,0	0/0:6,0:6:18.04:0,18,246	0/1:14,3:17:99:259,0,197	1/1:4,3:7:15.05:575,15,0	0/1:11,6:17:99:699,0,166	0/1:9,3:12:99:330,0,320	./.
chr10	90677564	.	CTT	C	324.36	PASS	AC=2;AF=0.067;AN=30;BaseQRankSum=2.330;DP=332;FS=1.319;HRun=3;HaplotypeScore=157.4367;InbreedingCoeff=0.9983;MQ=102.93;MQ0=0;MQRankSum=-2.692;QD=32.44;ReadPosRankSum=2.981;VQSLOD=3.5052;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,2048	0/0:16,0:16:48.16:0,48,926	0/0:28,0:28:84.26:0,84,1569	0/0:15,0:15:42.14:0,42,811	./.	./.	./.	./.	./.	0/0:27,0:27:78.27:0,78,1467	0/0:21,0:21:63.22:0,63,1213	0/0:18,0:18:54.19:0,54,1042	0/0:17,0:17:42.14:0,42,810	0/0:17,0:17:48.12:0,48,888	0/0:35,0:35:99:0,105,1987	0/0:31,0:31:90.31:0,90,1683	0/0:29,0:29:87.28:0,87,1637	1/1:0,10:10:27.09:413,27,0	./.	./.	./.	0/0:21,0:21:63.22:0,63,1183	./.	./.	0/0:10,0:10:30.10:0,30,560	./.	./.	./.
chr10	90677634	.	A	ACAC	5961.03	PASS	AB=0.857;AC=19;AF=0.380;AN=50;BaseQRankSum=9.555;DP=469;FS=3.917;HRun=0;HaplotypeScore=194.8752;InbreedingCoeff=0.9231;MQ=94.46;MQ0=0;MQRankSum=-11.388;QD=55.71;ReadPosRankSum=-1.602;VQSLOD=4.8331;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,2152	0/0:10,0:10:30.10:0,30,553	0/0:25,0:25:75.25:0,75,1335	0/0:29,0:29:66.98:0,67,1163	./.	1/1:19,0:19:48.16:1172,48,0	1/1:14,0:14:39.13:917,39,0	1/1:15,0:15:42.09:868,42,0	1/1:14,0:14:39.13:924,39,0	0/0:28,0:28:78.25:0,78,1382	0/0:16,0:16:42.14:0,42,782	0/0:17,0:17:51.16:0,51,916	0/0:29,0:29:81.28:0,81,1509	0/0:20,0:20:60.16:0,60,1080	0/0:28,0:28:81.28:0,81,1509	0/0:36,0:36:99:0,108,1911	0/0:28,0:28:84.29:0,84,1561	0/0:14,0:14:31.66:0,32,563	1/1:9,0:9:23.87:525,24,0	1/1:4,0:4:9.03:193,9,0	1/1:8,0:8:11.54:168,12,0	0/0:23,0:22:60.21:0,60,1117	./.	0/1:5,1:6:3.86:69,0,4	0/0:18,0:18:54.19:0,54,1004	1/1:9,3:12:33.04:685,33,0	1/1:6,0:6:18.06:440,18,0	./.
chr10	90677788	.	GA	G	762.01	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.473;DP=562;FS=7.641;HRun=7;HaplotypeScore=62.3746;InbreedingCoeff=0.9919;MQ=68.85;MQ0=0;MQRankSum=2.542;QD=25.40;ReadPosRankSum=-0.089;VQSLOD=4.0166;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:84.19:857,84,0	0/0:12,0:12:33.11:0,33,415	0/0:13,0:13:21.02:0,21,241	0/0:13,0:13:30.04:0,30,347	0/0:35,0:35:96.29:0,96,1181	0/0:19,0:19:51.15:0,51,622	0/0:19,0:19:57.14:0,57,698	0/0:28,0:28:66.19:0,66,808	0/0:12,0:12:33.02:0,33,391	0/0:26,0:26:75.24:0,75,941	0/0:19,0:18:33.10:0,33,411	0/0:20,0:20:57.15:0,57,700	0/0:28,0:28:81.24:0,81,1000	0/0:22,0:22:63.16:0,63,764	0/0:27,0:27:72.22:0,72,894	0/0:31,0:31:81.25:0,81,1005	0/0:23,0:23:63.20:0,63,792	0/0:18,0:18:51.16:0,51,641	0/0:19,0:19:51.16:0,51,640	0/0:19,0:19:48.15:0,48,603	0/0:19,0:19:51.13:0,51,624	0/0:22,0:22:54.17:0,54,679	0/0:15,0:15:42.13:0,42,525	0/0:12,0:12:30.08:0,30,364	0/0:13,0:13:33.11:0,33,415	0/0:17,0:17:48.15:0,48,603	0/0:21,0:20:60.19:0,60,750	0/0:9,0:9:24.08:0,24,302
chr10	90677909	.	C	CAGTA	15291.80	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-13.847;DP=482;FS=3.395;HRun=0;HaplotypeScore=81.8447;InbreedingCoeff=0.9556;MQ=83.74;MQ0=1;MQRankSum=-1.870;QD=61.91;ReadPosRankSum=8.913;VQSLOD=6.0695;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,2221	1/1:0,11:11:33.11:877,33,0	0/0:23,0:23:60.16:0,60,1019	0/0:19,0:19:45.15:0,45,799	0/0:19,0:19:47.82:0,48,733	0/0:15,0:15:35.99:0,36,616	0/0:11,0:11:31.66:0,32,546	0/0:23,0:23:64.50:0,64,1229	0/0:8,0:8:21.06:0,21,339	1/1:3,21:24:66.18:1658,66,0	1/1:6,13:20:39.09:975,39,0	1/1:1,23:24:57.20:1515,57,0	1/1:0,20:21:47.80:1278,48,0	1/1:5,12:18:42.14:1088,42,0	1/1:0,24:27:66.23:1757,66,0	1/1:0,29:30:72.25:1911,72,0	1/1:0,24:24:57.20:1520,57,0	1/1:1,4:6:6.02:160,6,0	0/0:11,0:11:26.90:0,27,427	0/0:11,0:11:21.06:0,21,329	0/0:8,0:8:24.07:0,24,416	1/1:4,19:23:54.19:1434,54,0	0/0:11,0:12:23.88:0,24,409	0/0:5,0:5:12:0,12,188	1/1:1,17:18:42.14:1118,42,0	0/0:13,0:13:30.10:0,30,525	0/0:13,0:13:36.12:0,36,668	0/0:0,0:1:1.25:0,1,3
chr10	90678007	.	C	CTT	897.60	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.802;DP=454;FS=10.513;HRun=1;HaplotypeScore=79.7799;InbreedingCoeff=0.9645;MQ=101.48;MQ0=2;MQRankSum=-1.926;QD=44.88;ReadPosRankSum=1.438;VQSLOD=2.6870;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:51.13:992,51,0	0/0:11,0:11:33.11:0,33,535	0/0:27,0:27:72.73:0,73,984	0/0:30,0:30:74.19:0,74,1086	0/0:13,0:13:36.11:0,36,562	0/0:19,0:19:57.19:0,57,926	0/0:11,0:11:27.09:0,27,438	0/0:27,0:27:78.21:0,78,1219	0/0:12,0:12:33.11:0,33,547	0/0:11,0:11:33.11:0,33,538	0/0:19,0:19:45.13:0,45,685	0/0:18,0:18:51.17:0,51,805	0/0:16,0:16:42.14:0,42,683	0/0:16,0:16:36.11:0,36,560	0/0:26,0:26:66.21:0,66,1064	0/0:15,0:15:45.15:0,45,733	0/0:13,0:13:37.31:0,37,538	0/0:10,0:10:15.05:0,15,244	0/0:20,0:20:60.14:0,60,914	0/0:18,0:18:48.16:0,48,779	0/0:11,0:10:24:0,24,363	0/0:10,0:10:30.10:0,30,498	0/0:10,0:10:18.06:0,18,294	0/0:18,0:17:36.04:0,36,552	0/0:14,0:14:41.34:0,41,625	0/0:19,0:19:51.17:0,51,831	0/0:14,0:12:39.07:0,39,580	0/0:6,0:6:18.06:0,18,293
chr10	90678048	.	TACACACACAC	T	4176.62	PASS	AB=0.974;AC=37;AF=0.804;AN=46;BaseQRankSum=-2.816;DP=350;FS=8.228;HRun=0;HaplotypeScore=106.6178;InbreedingCoeff=0.3541;MQ=62.37;MQ0=16;MQRankSum=0.340;QD=19.79;ReadPosRankSum=0.133;VQSLOD=2.0655;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:12:5.95:156,0,6	0/1:7,0:7:3.60:4,0,90	./.	./.	1/1:8,1:9:6.02:179,6,0	1/1:15,0:15:12.04:357,12,0	./.	1/1:13,2:15:6.01:104,6,0	1/1:9,0:9:12.04:318,12,0	0/1:9,0:9:18.96:60,0,19	0/0:9,0:18:5.44:0,5,47	1/1:13,0:12:8.01:183,8,0	1/1:8,4:11:3.01:76,3,0	1/1:4,6:10:6.02:169,6,0	0/0:21,0:22:5.93:0,6,298	1/1:11,0:12:21.05:552,21,0	0/0:17,0:16:23.90:0,24,266	1/1:3,0:9:3.01:39,3,0	1/1:8,0:9:9.03:261,9,0	1/1:4,12:16:2.94:18,3,0	1/1:9,0:7:12.04:356,12,0	1/1:8,0:8:15.05:393,15,0	./.	./.	1/1:4,0:4:9.02:127,9,0	1/1:10,0:17:18.06:534,18,0	1/1:9,1:10:12.04:204,12,0	1/1:0,5:5:3.01:88,3,0
chr10	90678088	.	CAGAGAG	C	395.33	PASS	AB=0.964;AC=10;AF=0.208;AN=48;BaseQRankSum=1.600;DP=371;FS=10.533;HRun=0;HaplotypeScore=121.1188;InbreedingCoeff=0.3898;MQ=42.78;MQ0=34;MQRankSum=-1.967;QD=4.49;ReadPosRankSum=3.189;VQSLOD=1.8103;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:5.61:0,6,61	1/1:6,0:6:1.53:33,2,0	./.	./.	0/1:12,0:11:0:0,0,0	0/0:11,0:9:2.97:0,3,10	0/0:11,0:8:3.01:0,3,54	0/0:18,0:18:8.93:0,9,69	./.	1/1:14,8:23:27.01:456,27,0	./.	0/1:10,2:11:0:0,0,0	0/1:9,0:8:5.65:6,0,6	0/0:10,0:9:3.47:0,3,11	0/0:22,1:21:4.83:0,5,12	0/0:13,0:13:0.47:0,0,1	0/0:15,0:14:7.32:0,7,21	0/0:15,0:15:14.82:0,15,179	0/0:15,0:13:8.81:0,9,65	0/0:18,0:17:0.47:0,0,1	0/0:15,0:11:5.86:0,6,123	0/1:15,0:12:0:0,0,0	0/0:15,0:14:3.01:0,3,41	0/0:25,0:19:14.98:0,15,230	1/1:9,0:11:0.89:2,1,0	0/0:15,0:14:3.85:0,4,22	0/0:14,0:11:7.97:0,8,37	0/0:7,0:7:0:0,0,0
chr10	90678141	.	A	ATT	11914.54	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.314;DP=389;FS=8.528;HRun=0;HaplotypeScore=73.0589;InbreedingCoeff=0.8508;MQ=62.29;MQ0=18;MQRankSum=-2.982;QD=33.19;ReadPosRankSum=1.999;VQSLOD=7.0508;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:22.31:314,22,0	1/1:4,0:4:12.04:158,12,0	0/0:13,0:10:30.10:0,30,453	0/0:17,0:11:14.88:0,15,273	1/1:2,13:15:11.89:82,12,0	1/1:10,0:9:24.08:349,24,0	1/1:11,0:9:24.05:341,24,0	1/1:4,33:37:99:1573,99,0	1/1:13,0:11:30.10:497,30,0	1/1:23,0:23:65.81:817,66,0	1/1:14,0:13:33.07:530,33,0	1/1:15,0:14:22.24:446,22,0	1/1:6,0:6:18.04:257,18,0	1/1:7,0:6:17.98:193,18,0	1/1:15,0:15:42.13:606,42,0	1/1:1,15:16:5.99:59,6,0	1/1:13,0:12:33.08:422,33,0	1/1:12,0:12:27.02:320,27,0	1/1:1,20:20:60.17:895,60,0	1/1:0,3:4:5.99:60,6,0	1/1:24,0:21:51.16:789,51,0	1/1:14,0:14:39.10:582,39,0	1/1:12,0:12:33.11:498,33,0	1/1:19,0:16:40.62:490,41,0	1/1:9,0:9:21.54:329,22,0	1/1:15,0:15:38.41:641,38,0	1/1:10,0:8:23.98:269,24,0	1/1:8,0:8:24.08:399,24,0
chr10	90678938	.	G	GTTT	2094.04	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=9.189;DP=533;FS=8.765;HRun=10;HaplotypeScore=87.2083;InbreedingCoeff=0.8731;MQ=65.40;MQ0=5;MQRankSum=-1.567;QD=15.99;ReadPosRankSum=-3.264;VQSLOD=0.5559;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:78.07:0,78,929	0/1:6,0:6:23.70:24,0,29	0/0:17,0:9:11.93:0,12,113	0/0:16,0:12:3.87:0,4,92	0/0:39,0:39:99:0,103,1246	0/0:19,0:20:46.42:0,46,572	0/0:16,0:18:44.96:0,45,510	0/0:27,0:27:50.99:0,51,603	0/0:16,0:14:30.04:0,30,360	1/1:10,0:20:46.43:397,46,0	1/1:5,0:21:32.89:281,33,0	1/1:8,1:12:26.93:274,27,0	1/1:6,1:8:12.42:125,12,0	1/1:3,1:14:10.44:237,10,0	0/0:7,0:9:13.55:0,14,78	1/1:7,8:15:15.99:287,16,0	0/0:37,0:37:61.59:0,62,328	1/1:7,1:13:39:405,39,0	0/0:26,0:26:53.72:0,54,644	0/0:17,0:16:42.12:0,42,504	0/0:16,0:16:36.33:0,36,407	1/1:3,0:9:14.94:134,15,0	0/0:12,0:13:33.02:0,33,378	0/0:31,0:34:84:0,84,940	1/1:5,0:8:17.91:142,18,0	0/0:21,0:21:47.90:0,48,549	0/0:17,0:20:46.42:0,46,547	0/0:20,0:19:45.05:0,45,544
chr10	90678946	.	TTTG	T	1674.85	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=5.430;DP=534;FS=8.866;HRun=0;HaplotypeScore=87.3171;InbreedingCoeff=0.2886;MQ=60.00;MQ0=9;MQRankSum=-0.109;QD=9.63;ReadPosRankSum=-2.727;VQSLOD=1.5538;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:93.14:0,93,1720	1/1:2,3:5:15.03:194,15,0	0/0:19,0:8:11.68:0,12,153	0/1:15,0:8:3.95:4,0,101	0/0:41,0:41:99:0,117,2107	0/0:21,0:20:54.12:0,54,928	0/0:16,0:16:48.12:0,48,879	0/0:25,0:23:57.02:0,57,906	0/0:17,0:15:39.07:0,39,654	0/1:23,0:22:27.63:99,0,28	0/1:18,0:18:21.48:21,0,76	0/0:10,0:9:9.89:0,10,56	0/1:6,0:6:2.30:2,0,94	0/1:15,0:14:14.96:15,0,59	1/1:4,6:10:30.08:394,30,0	0/1:16,0:15:0.79:1,0,111	1/1:3,32:35:68.90:1015,69,0	0/1:16,0:15:40.80:41,0,90	0/0:28,0:27:71.95:0,72,1165	0/0:18,0:17:48.07:0,48,855	0/0:16,0:16:38.94:0,39,639	0/1:8,0:8:0.14:0,0,42	0/0:12,0:12:33.55:0,34,591	0/0:37,0:37:93.22:0,93,1708	0/1:7,0:7:6.27:51,0,6	0/0:20,0:20:56.26:0,56,915	0/0:20,0:20:57.09:0,57,929	0/0:25,0:24:69.11:0,69,1236
chr10	90678948	.	TG	T	2071.04	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=12.762;DP=529;FS=7.750;HRun=1;HaplotypeScore=67.5078;InbreedingCoeff=0.9540;MQ=57.90;MQ0=10;MQRankSum=-2.347;QD=12.18;ReadPosRankSum=-0.994;VQSLOD=1.2692;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:93.04:0,93,1102	1/1:6,0:6:17.61:116,18,0	0/0:17,0:6:11.96:0,12,119	0/0:15,0:8:0.61:0,1,62	0/0:41,0:41:99:0,120,1439	0/0:20,0:19:54.07:0,54,638	0/0:17,0:17:38.87:0,39,541	0/0:25,0:21:57.08:0,57,688	0/0:17,0:15:39.09:0,39,465	1/1:16,6:21:45.96:336,46,0	1/1:17,1:18:32.17:185,32,0	1/1:8,2:9:26.43:194,26,0	1/1:7,0:7:13.83:82,14,0	1/1:15,0:14:25.98:182,26,0	1/1:11,0:11:26.04:161,26,0	1/1:14,1:14:22.35:129,22,0	1/1:33,0:33:65.63:384,66,0	1/1:18,1:18:26.25:279,26,0	0/0:27,0:26:69.97:0,70,747	0/0:18,0:17:48.07:0,48,578	0/0:15,0:15:39.53:0,40,451	1/1:7,1:8:17.46:109,17,0	0/0:13,0:13:26.44:0,26,398	0/0:35,0:35:86.93:0,87,1081	1/1:6,0:6:17.89:140,18,0	0/0:20,0:20:51.12:0,51,604	0/0:20,0:20:53.07:0,53,607	0/0:25,0:24:69.07:0,69,797
chr10	90679043	.	GT	G	415.38	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=7.456;DP=404;FS=6.116;HRun=13;HaplotypeScore=83.6853;InbreedingCoeff=0.4306;MQ=59.15;MQ0=1;MQRankSum=-5.331;QD=4.47;ReadPosRankSum=0.148;VQSLOD=1.8484;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:54.30:0,54,488	1/1:2,2:4:5.93:44,6,0	0/0:8,0:7:8.98:0,9,74	0/0:4,0:4:0:0,0,0	0/0:29,0:29:27.02:0,27,146	0/1:19,0:19:13.89:14,0,22	0/0:14,0:14:1.67:0,2,45	0/0:21,0:18:13.34:0,13,119	0/0:17,0:17:4.36:0,4,78	0/0:10,0:10:20.97:0,21,190	0/0:16,0:16:28.39:0,28,261	0/0:11,0:12:22.49:0,22,288	0/0:9,0:11:26.69:0,27,222	0/0:10,0:10:20.97:0,21,189	1/1:5,10:15:29.77:219,30,0	0/0:20,0:20:54.08:0,54,520	1/1:5,12:17:38.06:265,38,0	0/0:18,0:19:38.90:0,39,364	0/0:18,0:17:3.45:0,3,48	0/0:16,0:16:9.46:0,9,57	0/0:6,0:6:8.79:0,9,52	0/0:6,0:6:12.02:0,12,117	0/0:13,0:13:13.98:0,14,82	0/0:9,0:8:5.73:0,6,35	0/0:14,0:15:35.88:0,36,330	0/1:22,0:22:3.55:4,0,63	0/1:16,0:16:12.12:12,0,15	0/0:8,0:8:1.32:0,1,19
chr10	90679053	.	TTTTAAAGATTTA	T	6656.91	PASS	AC=26;AF=0.481;AN=54;BaseQRankSum=11.745;DP=407;FS=12.323;HRun=0;HaplotypeScore=129.8869;InbreedingCoeff=0.8873;MQ=52.26;MQ0=7;MQRankSum=-8.742;QD=30.12;ReadPosRankSum=-3.098;VQSLOD=2.9417;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:63.20:0,63,2932	0/0:3,0:3:6.02:0,6,282	0/0:4,0:3:9:0,9,120	./.	1/1:12,17:29:27.05:570,27,0	1/1:4,17:21:24.08:802,24,0	1/1:3,13:16:15.05:447,15,0	1/1:16,10:18:29.94:519,30,0	1/1:7,8:15:23.75:604,24,0	0/0:10,0:10:23.97:0,24,1274	0/0:14,0:14:36.07:0,36,1914	0/0:14,0:14:39.10:0,39,1677	0/0:9,0:9:24.07:0,24,1062	0/0:11,0:11:30.07:0,30,1500	0/0:14,0:13:30.10:0,30,1066	0/0:22,0:22:60.19:0,60,2833	0/0:17,0:16:42.40:0,42,1479	0/0:16,0:16:42.14:0,42,2231	1/1:21,2:22:50.92:882,51,0	1/1:1,12:13:24.04:553,24,0	1/1:3,6:9:3.01:54,3,0	0/0:6,0:6:15.05:0,15,633	1/1:14,1:15:9.03:201,9,0	1/1:3,8:10:2.98:55,3,0	0/0:18,0:18:54.17:0,54,2405	1/1:4,16:20:40.34:1081,40,0	1/1:3,16:19:24.01:785,24,0	1/1:2,2:4:3.01:104,3,0
chr10	90679054	.	TTTAAAGATTTA	T	5636.16	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=11.407;DP=404;FS=8.460;HRun=0;HaplotypeScore=125.8554;InbreedingCoeff=0.7997;MQ=52.25;MQ0=7;MQRankSum=-8.402;QD=25.50;ReadPosRankSum=-3.337;VQSLOD=2.2465;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:63.17:0,63,2735	0/0:3,0:3:6.01:0,6,257	0/0:4,0:3:9:0,9,92	0/1:3,0:3:0:0,0,0	1/1:27,0:27:25.90:514,26,0	1/1:20,1:21:24.08:686,24,0	1/1:16,0:16:15.05:364,15,0	1/1:24,1:17:1.63:430,2,0	1/1:15,0:15:24.06:491,24,0	0/0:12,0:12:28.26:0,28,1420	0/0:14,0:14:35.33:0,35,1781	0/0:14,0:14:39.06:0,39,1615	0/0:9,0:9:24:0,24,971	0/0:11,0:11:30:0,30,1391	0/0:14,0:13:30.07:0,30,999	0/0:22,0:22:60.20:0,60,2695	0/0:16,0:15:44.99:0,45,1411	0/0:15,0:15:42.14:0,42,2081	1/1:8,15:22:34.31:829,34,0	1/1:13,0:13:24.04:454,24,0	1/1:9,0:9:3.48:55,3,0	0/0:6,0:6:15.04:0,15,616	1/1:5,10:15:10.38:223,10,0	0/1:11,0:10:11.47:29,0,11	0/0:18,0:18:53.85:0,54,2242	1/1:20,0:20:40.33:855,40,0	1/1:19,0:19:23.74:620,24,0	1/1:4,0:4:3.48:85,3,0
chr10	90679056	.	TAAAGA	T	3047.61	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=11.801;DP=373;FS=6.680;HRun=0;HaplotypeScore=88.7047;InbreedingCoeff=0.7411;MQ=51.15;MQ0=8;MQRankSum=-8.001;QD=15.47;ReadPosRankSum=-2.522;VQSLOD=1.7398;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.20:0,63,1640	0/0:2,0:2:6.02:0,6,132	0/0:4,0:3:9.03:0,9,141	0/1:2,0:2:0:0,0,0	1/1:19,0:20:27.05:441,27,0	1/1:19,1:20:24.08:323,24,0	1/1:15,0:15:15.01:202,15,0	0/1:24,0:15:19.08:211,0,19	1/1:10,2:12:24.06:308,24,0	0/0:15,0:15:35.11:0,35,1140	0/0:13,0:13:36.05:0,36,1027	0/0:14,0:14:39.06:0,39,1090	0/0:8,0:8:24.08:0,24,591	0/0:11,0:11:30.10:0,30,815	0/0:11,0:10:30.10:0,30,670	0/0:21,0:21:60.21:0,60,1711	0/0:15,0:14:42.12:0,42,969	0/0:15,0:15:42.14:0,42,1209	1/1:19,1:20:4.34:400,4,0	1/1:13,0:13:21.06:290,21,0	1/1:8,0:8:3.90:56,4,0	0/0:5,0:5:15.05:0,15,428	1/1:13,0:13:11.47:188,11,0	0/1:9,0:9:13.17:19,0,13	0/0:18,0:18:54.18:0,54,1436	1/1:18,0:18:36.99:471,37,0	1/1:18,0:18:24.07:302,24,0	1/1:3,1:4:4.26:43,4,0
chr10	90680817	.	TA	T	1311.99	PASS	AC=36;AF=1.000;AN=36;DP=305;FS=0.000;HRun=11;HaplotypeScore=15.9976;InbreedingCoeff=0.0366;MQ=32.42;MQ0=26;QD=5.21;VQSLOD=-0.5042;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,0:4:4.07:12,4,0	./.	./.	./.	1/1:1,12:6:8.99:74,9,0	./.	1/1:5,13:14:29.96:246,30,0	./.	1/1:4,14:14:29.93:243,30,0	1/1:1,21:17:14.98:123,15,0	1/1:2,12:9:8.99:74,9,0	1/1:3,9:8:2.89:25,3,0	1/1:0,15:11:5.99:49,6,0	1/1:2,0:9:4.04:12,4,0	1/1:1,12:5:3:25,3,0	1/1:14,0:24:2.03:6,2,0	1/1:4,17:13:14.02:104,14,0	1/1:0,5:3:8.99:74,9,0	1/1:1,7:8:3:25,3,0	1/1:1,6:7:3:25,3,0	1/1:0,3:3:5.99:49,6,0	./.	./.	1/1:2,17:14:14.98:123,15,0	1/1:0,7:4:11.99:98,12,0	./.	./.
chr10	90681033	.	TA	T	1436.02	PASS	AB=1.000;AC=27;AF=0.794;AN=34;BaseQRankSum=2.695;DP=242;FS=1.244;HRun=11;HaplotypeScore=21.3944;InbreedingCoeff=0.5255;MQ=38.72;MQ0=29;MQRankSum=-3.866;QD=9.84;ReadPosRankSum=-0.438;VQSLOD=0.7692;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:22:36.09:0,36,384	./.	./.	./.	1/1:0,3:3:8.99:74,9,0	./.	./.	1/1:2,15:13:36.99:276,37,0	./.	1/1:0,10:5:14.97:119,15,0	./.	1/1:1,19:20:35.95:295,36,0	1/1:2,9:10:8.99:74,9,0	1/1:0,10:9:5.99:49,6,0	0/0:15,0:8:11.77:0,12,76	1/1:3,12:12:29.96:246,30,0	0/1:13,0:6:5.42:5,0,38	1/1:2,14:11:5.99:49,6,0	1/1:0,5:5:14.97:121,15,0	./.	./.	1/1:0,2:1:3:25,3,0	0/0:1,0:1:0:0,0,0	./.	./.	1/1:2,9:8:20.96:170,21,0	1/1:1,4:3:2.98:25,3,0	1/1:1,4:2:3:25,3,0
chr10	90681252	.	CTTT	C	2660.69	PASS	AB=0.944;AC=38;AF=0.760;AN=50;BaseQRankSum=8.048;DP=200;FS=0.605;HRun=6;HaplotypeScore=54.9628;InbreedingCoeff=0.5360;MQ=66.56;MQ0=8;MQRankSum=-4.043;QD=19.42;ReadPosRankSum=1.797;VQSLOD=-0.4551;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.22:0,69,1519	./.	0/1:7,0:7:10.86:11,0,99	0/0:3,0:1:2.88:0,3,15	1/1:4,0:4:8.87:58,9,0	1/1:13,0:13:32.73:288,33,0	0/0:2,0:2:0.47:0,0,1	1/1:17,0:5:8.85:67,9,0	1/1:4,0:4:12:135,12,0	1/1:3,0:3:9:96,9,0	1/1:2,0:2:5.93:58,6,0	1/1:4,0:4:11.13:67,11,0	1/1:3,1:4:5.96:61,6,0	1/1:0,2:2:3.01:37,3,0	0/0:8,0:8:24.08:0,24,543	1/1:7,0:6:17.99:219,18,0	0/0:26,0:25:72.25:0,72,1586	1/1:20,0:20:50.95:569,51,0	1/1:6,3:9:24.04:316,24,0	1/1:4,0:4:5.91:54,6,0	1/1:8,0:8:23.93:264,24,0	./.	./.	1/1:3,1:4:3.35:15,3,0	1/1:6,0:6:2.42:22,2,0	1/1:6,1:7:18.02:232,18,0	0/1:7,0:7:1.60:101,0,2	1/1:4,0:4:12.03:143,12,0
chr10	90681255	.	T	TA	2539.65	PASS	AB=0.675;AC=36;AF=0.720;AN=50;BaseQRankSum=8.391;DP=189;FS=6.934;HRun=0;HaplotypeScore=48.7886;InbreedingCoeff=0.5988;MQ=75.22;MQ0=3;MQRankSum=-2.602;QD=22.28;ReadPosRankSum=2.670;VQSLOD=4.8581;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.22:0,69,945	./.	0/0:10,0:9:7.84:0,8,95	0/0:4,0:2:5.59:0,6,33	1/1:0,3:3:9.02:100,9,0	1/1:0,11:11:33.06:350,33,0	1/1:0,2:2:2.60:10,3,0	0/1:7,6:6:5.09:92,0,5	1/1:0,4:4:12.03:131,12,0	1/1:0,3:3:9:88,9,0	1/1:0,2:2:6.02:68,6,0	1/1:0,4:4:12.02:128,12,0	1/1:1,2:3:6.02:66,6,0	0/0:2,0:2:1.25:0,1,3	0/0:8,0:8:24.08:0,24,335	1/1:0,7:6:18.05:195,18,0	0/0:27,0:26:75.20:0,75,1001	1/1:0,18:18:51.14:562,51,0	1/1:3,5:8:10.97:152,11,0	1/1:0,3:3:6.02:68,6,0	1/1:2,6:8:18.90:220,19,0	./.	./.	1/1:1,3:4:3.01:33,3,0	1/1:0,5:5:5.69:43,6,0	0/1:3,3:6:2.45:87,0,2	1/1:1,5:6:15.04:175,15,0	1/1:0,4:4:12.03:133,12,0
chr10	90681729	.	GTACA	G	491.35	PASS	AC=6;AF=0.500;AN=12;BaseQRankSum=-1.513;DP=218;FS=0.000;HRun=0;HaplotypeScore=24.3003;MQ=10.56;MQ0=188;MQRankSum=-3.269;QD=23.40;ReadPosRankSum=-1.317;VQSLOD=2.5901;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:2:6.02:0,6,164	./.	./.	1/1:5,4:4:9.03:174,9,0	./.	./.	./.	./.	./.	0/0:12,0:2:3.01:0,3,82	./.	./.	./.	./.	./.	./.	./.	./.	1/1:1,5:4:9.03:174,9,0	./.	./.	1/1:1,5:6:12.04:232,12,0	./.	0/0:25,0:7:12.04:0,12,327	./.	./.	./.
chr10	90684539	.	TA	T	3103.81	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=12.344;DP=506;FS=30.995;HRun=9;HaplotypeScore=97.4701;InbreedingCoeff=0.9491;MQ=70.64;MQ0=3;MQRankSum=0.425;QD=18.05;ReadPosRankSum=4.161;VQSLOD=2.3158;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:84.15:0,84,926	1/1:0,3:3:9:80,9,0	0/0:36,1:25:25.05:0,25,318	0/0:26,0:22:35.18:0,35,320	0/0:19,0:20:59.98:0,60,641	0/0:15,0:15:27.06:0,27,299	0/0:18,0:18:51.14:0,51,581	0/0:32,1:33:57.65:0,58,862	0/0:16,0:16:36.10:0,36,409	1/1:4,9:13:27.01:239,27,0	1/1:3,11:14:29.90:250,30,0	1/1:5,8:13:24.01:213,24,0	1/1:2,13:14:39.02:345,39,0	1/1:3,11:14:30.01:266,30,0	1/1:7,12:19:41.80:355,42,0	1/1:3,13:16:39.02:345,39,0	1/1:11,26:37:80.76:703,81,0	1/1:4,8:12:21.01:186,21,0	0/0:11,0:11:33.06:0,33,351	0/0:22,0:22:51.09:0,51,552	0/0:13,1:14:0.46:0,0,248	1/1:0,4:4:12.01:106,12,0	0/0:18,0:18:42.12:0,42,481	0/0:7,0:7:14.98:0,15,155	1/1:3,9:12:27.01:240,27,0	0/0:26,0:26:63.13:0,63,683	0/0:24,0:24:60.05:0,60,654	0/0:12,0:12:36.10:0,36,413
chr10	90684637	.	C	CT	1901.78	PASS	AB=1.000;AC=19;AF=0.365;AN=52;BaseQRankSum=12.072;DP=348;FS=5.273;HRun=0;HaplotypeScore=82.6586;InbreedingCoeff=0.8757;MQ=53.44;MQ0=11;MQRankSum=-10.145;QD=21.86;ReadPosRankSum=4.507;VQSLOD=5.3647;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:84.26:0,84,1149	0/0:5,0:4:12.04:0,12,166	0/1:12,0:3:15.45:15,0,35	./.	0/0:16,0:14:33.11:0,33,449	0/0:15,0:14:36.12:0,36,503	0/0:11,0:10:27.05:0,27,348	0/0:24,0:24:63.15:0,63,818	0/0:15,0:15:33.11:0,33,460	1/1:0,5:5:15.04:160,15,0	1/1:0,6:6:14.47:143,14,0	1/1:1,8:9:26.75:231,27,0	1/1:2,11:12:36.06:351,36,0	1/1:0,12:12:36:338,36,0	0/0:24,0:24:51.16:0,51,690	1/1:0,12:12:36.07:360,36,0	0/0:37,0:37:90.29:0,90,1237	1/1:2,5:7:18.04:204,18,0	0/0:16,0:13:39.12:0,39,520	0/0:5,0:5:9.03:0,9,122	0/0:5,0:5:12.04:0,12,168	1/1:1,2:3:6.01:58,6,0	0/0:12,0:11:30.10:0,30,414	0/0:11,0:10:27.09:0,27,375	1/1:1,7:8:24.05:246,24,0	0/0:10,0:10:30.10:0,30,420	0/0:11,0:10:30.10:0,30,416	./.
chr10	90684638	.	C	CATTT	3477.80	PASS	AC=18;AF=0.346;AN=52;BaseQRankSum=11.897;DP=344;FS=4.352;HRun=0;HaplotypeScore=95.0544;InbreedingCoeff=0.9257;MQ=53.61;MQ0=10;MQRankSum=-10.851;QD=46.37;ReadPosRankSum=4.668;VQSLOD=3.9925;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:84.29:0,84,1744	0/0:5,0:4:12.04:0,12,249	0/0:10,0:3:2.62:0,3,59	./.	0/0:16,0:14:33.10:0,33,644	0/0:15,0:14:36.12:0,36,755	0/0:11,0:10:24.08:0,24,499	0/0:23,0:23:60.19:0,60,1171	0/0:15,0:15:33.11:0,33,688	1/1:0,5:5:15.05:268,15,0	1/1:0,6:6:18.02:266,18,0	1/1:1,8:9:27.08:419,27,0	1/1:2,11:12:36.12:600,36,0	1/1:0,12:12:36.12:593,36,0	0/0:23,0:23:48.15:0,48,957	1/1:0,12:12:36.12:600,36,0	0/0:37,0:37:90.31:0,90,1847	1/1:2,5:7:18.06:295,18,0	0/0:15,0:12:36.08:0,36,683	0/0:5,0:5:9.03:0,9,187	0/0:5,0:5:12.04:0,12,252	1/1:1,2:3:6.02:99,6,0	0/0:12,0:11:33.07:0,33,642	0/0:11,0:10:27.09:0,27,561	1/1:1,7:8:15.85:338,16,0	0/0:10,0:10:30.10:0,30,629	0/0:11,0:10:30.10:0,30,619	./.
chr10	90684640	.	CT	C	1275.31	PASS	AC=18;AF=0.346;AN=52;BaseQRankSum=12.431;DP=343;FS=3.479;HRun=1;HaplotypeScore=85.1189;InbreedingCoeff=0.9189;MQ=53.58;MQ0=9;MQRankSum=-11.039;QD=17.00;ReadPosRankSum=4.007;VQSLOD=4.2493;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:84.27:0,84,1317	0/0:4,0:4:12.04:0,12,191	0/0:11,0:3:5.98:0,6,68	./.	0/0:16,0:14:29.26:0,29,431	0/0:15,0:14:36.12:0,36,573	0/0:11,0:10:24.08:0,24,377	0/0:21,0:21:54.18:0,54,862	0/0:16,0:16:33.11:0,33,522	1/1:0,5:5:14.99:127,15,0	1/1:0,6:6:17.87:131,18,0	1/1:1,8:9:19.55:155,20,0	1/1:1,11:12:27.97:214,28,0	1/1:0,12:12:35.41:248,35,0	0/0:22,0:22:45.07:0,45,664	1/1:0,12:12:35.82:267,36,0	0/0:39,0:39:90.30:0,90,1399	1/1:2,5:7:12.02:118,12,0	0/0:14,0:11:33.09:0,33,503	0/0:5,0:5:9:0,9,98	0/0:5,0:5:12.04:0,12,192	1/1:1,2:3:5.94:41,6,0	0/0:12,0:11:33.11:0,33,523	0/0:11,0:10:6.11:0,6,355	1/1:1,7:8:23.87:174,24,0	0/0:10,0:10:30.10:0,30,479	0/0:11,0:10:30.10:0,30,479	./.
chr10	90684647	.	T	TG	1545.86	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=0.823;DP=371;FS=15.469;HRun=3;HaplotypeScore=94.8703;InbreedingCoeff=0.5229;MQ=56.17;MQ0=6;MQRankSum=-1.344;QD=9.54;ReadPosRankSum=-1.023;VQSLOD=0.1131;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:78.03:0,78,816	1/1:3,0:3:8.98:78,9,0	0/0:14,0:5:11.27:0,11,69	0/0:10,0:2:5.97:0,6,48	0/0:14,0:14:19.63:0,20,98	0/0:13,0:12:15.28:0,15,81	0/0:12,0:12:19.99:0,20,86	0/0:21,0:20:42.97:0,43,270	0/0:18,0:18:32.92:0,33,204	0/0:8,0:8:5.45:0,5,30	1/1:7,0:7:3.74:39,4,0	0/1:10,0:10:5.71:39,0,6	1/1:17,0:16:3.45:99,3,0	0/1:14,0:14:11.55:43,0,12	1/1:23,1:24:39.09:407,39,0	0/1:21,0:21:30.33:79,0,30	1/1:37,4:41:81.10:839,81,0	1/1:7,0:7:2.41:30,2,0	0/0:11,0:9:19.96:0,20,106	0/0:4,0:4:3:0,3,25	0/0:6,0:6:8.96:0,9,71	0/1:3,0:3:1.28:13,0,1	0/0:12,0:12:25.20:0,25,135	0/0:11,0:10:12.12:0,12,83	1/1:10,0:10:4.19:53,4,0	0/0:12,0:12:24.86:0,25,151	0/0:10,0:9:21.10:0,21,141	0/1:5,0:5:0:0,0,0
chr10	90684650	.	G	GAAA	4952.28	PASS	AC=30;AF=0.556;AN=54;BaseQRankSum=-8.365;DP=409;FS=7.481;HRun=12;HaplotypeScore=104.0905;InbreedingCoeff=0.8970;MQ=58.07;MQ0=8;MQRankSum=4.560;QD=20.05;ReadPosRankSum=-1.974;VQSLOD=3.1040;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:30:65.91:0,66,690	1/1:0,0:3:5.92:39,6,0	0/0:14,0:5:5.89:0,6,58	0/0:11,0:4:5.89:0,6,53	1/1:4,13:21:34.97:419,35,0	1/1:3,7:11:19.29:301,19,0	1/1:1,10:12:27.09:483,27,0	1/1:17,8:27:8.45:574,8,0	1/1:9,11:23:38.11:573,38,0	0/0:8,0:8:24.07:0,24,269	0/0:6,0:7:7.68:0,8,83	0/0:10,0:10:20.95:0,21,235	0/0:17,0:17:23.78:0,24,257	0/0:14,0:14:32.99:0,33,366	1/1:1,0:26:27.41:172,27,0	0/0:20,0:21:47.92:0,48,496	1/1:4,0:38:46.92:340,47,0	0/0:7,0:8:11.88:0,12,119	1/1:5,7:11:26.98:379,27,0	./.	1/1:7,1:8:9.03:153,9,0	0/0:4,0:4:8.97:0,9,86	1/1:7,3:12:18.02:254,18,0	1/1:4,7:12:27.07:428,27,0	0/0:10,0:10:20.98:0,21,229	1/1:4,7:14:27.07:445,27,0	1/1:8,6:13:15.05:269,15,0	1/1:2,2:8:9.03:124,9,0
chr10	90685189	.	C	CT	414.13	PASS	AB=1.000;AC=10;AF=0.185;AN=54;BaseQRankSum=3.571;DP=360;FS=3.131;HRun=7;HaplotypeScore=49.7800;InbreedingCoeff=0.5154;MQ=33.35;MQ0=51;MQRankSum=-0.338;QD=4.87;ReadPosRankSum=-0.322;VQSLOD=-0.4964;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:20:36.04:0,36,346	1/1:7,4:8:12.04:145,12,0	0/0:5,0:1:3:0,3,29	./.	0/0:22,0:19:24.01:0,24,231	0/0:16,0:15:23.91:0,24,219	0/0:18,0:18:15.83:0,16,245	0/0:20,0:19:26.86:0,27,251	0/0:13,0:9:6:0,6,157	0/1:11,0:7:0.43:0,0,101	0/0:15,0:11:8.97:0,9,87	0/0:14,0:13:26.97:0,27,259	0/0:8,0:6:5.86:0,6,58	0/1:5,0:4:0:0,0,0	1/1:8,7:14:18.94:214,19,0	0/1:8,0:7:8.52:9,0,23	1/1:17,4:13:15.05:181,15,0	0/1:14,0:12:0.08:0,0,24	0/0:21,0:19:41.12:0,41,401	0/0:7,0:6:8.69:0,9,85	0/0:11,0:4:9.01:0,9,87	0/0:10,0:9:8.63:0,9,86	0/0:8,0:6:5.99:0,6,58	0/0:12,0:8:11.88:0,12,115	0/0:14,0:14:9.91:0,10,106	0/0:12,0:9:11.77:0,12,99	0/0:13,0:11:17.49:0,17,170	0/0:9,0:7:8.81:0,9,82
chr10	90685267	.	ACC	A	10058.39	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=0.914;DP=457;FS=17.733;HRun=9;HaplotypeScore=57.1125;InbreedingCoeff=0.9098;MQ=53.52;MQ0=32;MQRankSum=-2.221;QD=24.12;ReadPosRankSum=2.306;VQSLOD=2.5420;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:20:48.12:0,48,757	1/1:5,5:7:15.02:175,15,0	0/0:9,0:6:5.85:0,6,222	0/0:7,0:6:18.06:0,18,275	1/1:3,21:23:39.11:454,39,0	1/1:1,14:15:39.11:454,39,0	1/1:7,23:28:63.18:730,63,0	1/1:8,10:16:30.07:349,30,0	1/1:0,19:18:48.14:557,48,0	1/1:5,8:9:24.07:279,24,0	1/1:4,13:13:21.06:245,21,0	1/1:3,11:13:27.07:312,27,0	1/1:0,10:8:18.05:210,18,0	1/1:2,9:10:18.05:210,18,0	1/1:4,19:22:51.13:592,51,0	1/1:0,18:17:45.13:524,45,0	1/1:6,21:23:57.16:660,57,0	1/1:1,17:17:42.12:489,42,0	1/1:5,9:12:18.04:210,18,0	1/1:3,5:8:12.03:139,12,0	1/1:3,17:17:51.11:579,51,0	1/1:3,4:7:9.03:105,9,0	1/1:4,13:14:33.10:384,33,0	1/1:2,17:18:51.15:594,51,0	1/1:1,12:12:33.10:384,33,0	1/1:3,17:19:54.15:629,54,0	1/1:1,18:18:39.12:454,39,0	1/1:0,13:13:30.08:340,30,0
chr10	90687626	.	CACACACACA	C	13593.82	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=9.406;DP=400;FS=5.637;HRun=0;HaplotypeScore=129.7889;InbreedingCoeff=0.6807;MQ=58.55;MQ0=4;MQRankSum=-10.912;QD=42.22;ReadPosRankSum=4.757;VQSLOD=4.3191;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.28:0,90,4225	1/1:1,0:6:15.04:166,15,0	0/0:23,0:21:63.21:0,63,2614	0/0:23,0:20:57.19:0,57,2496	1/1:0,0:3:6.08:30,6,0	1/1:0,0:4:4.74:16,5,0	1/1:0,0:8:4.48:62,4,0	1/1:1,0:11:20.85:136,21,0	1/1:1,0:12:10.10:46,10,0	1/1:0,22:22:66.22:2072,66,0	1/1:0,17:17:27.09:878,27,0	1/1:0,23:24:60.21:1898,60,0	1/1:0,19:19:45.15:1424,45,0	1/1:1,19:20:42.14:1311,42,0	1/1:0,0:26:57.13:600,57,0	1/1:0,13:13:24.08:745,24,0	1/1:0,0:11:6.08:207,6,0	1/1:0,9:9:18.06:548,18,0	1/1:2,0:10:25.50:122,26,0	1/1:2,0:7:4.21:22,4,0	1/1:2,0:9:4.89:26,5,0	1/1:1,18:18:19.26:1245,19,0	1/1:1,0:3:2.98:21,3,0	1/1:9,0:11:24.80:204,25,0	1/1:0,17:17:39.13:1268,39,0	1/1:0,5:10:22.75:377,23,0	1/1:2,0:20:30.78:134,31,0	1/1:0,0:5:3.01:34,3,0
chr10	90687628	.	CACACA	C	8499.68	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=10.671;DP=391;FS=3.962;HRun=0;HaplotypeScore=120.2536;InbreedingCoeff=0.7498;MQ=57.24;MQ0=4;MQRankSum=-11.305;QD=27.07;ReadPosRankSum=5.083;VQSLOD=4.5282;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.31:0,90,2851	1/1:7,0:6:15.05:202,15,0	0/0:22,0:20:60.21:0,60,1759	0/0:23,0:20:57.19:0,57,1753	1/1:3,0:3:5.98:87,6,0	1/1:4,0:4:6.02:133,6,0	1/1:6,2:8:12.04:227,12,0	1/1:10,0:10:24.05:428,24,0	1/1:12,0:12:12.04:255,12,0	1/1:22,0:22:63.19:736,63,0	1/1:17,0:17:27.08:316,27,0	1/1:25,0:24:60.18:705,60,0	1/1:19,0:19:45.14:536,45,0	1/1:19,0:20:35.10:451,35,0	1/1:27,0:26:57.08:831,57,0	1/1:14,0:13:24.07:290,24,0	1/1:11,0:11:21.07:283,21,0	1/1:9,0:9:18.01:195,18,0	1/1:8,0:8:23.67:436,24,0	0/1:6,0:5:0:0,0,0	1/1:9,0:9:6.02:111,6,0	1/1:18,0:17:39.12:456,39,0	1/1:3,0:2:2.97:20,3,0	1/1:9,1:10:23.89:278,24,0	1/1:17,0:17:39.12:457,39,0	1/1:10,0:10:21.05:307,21,0	1/1:17,3:20:36.12:701,36,0	1/1:5,0:5:3.01:59,3,0
chr10	90688193	.	C	CAAAAAAA	5453.72	PASS	AB=1.000;AC=49;AF=0.907;AN=54;BaseQRankSum=0.366;DP=358;FS=0.000;HRun=15;HaplotypeScore=95.0915;InbreedingCoeff=0.0207;MQ=41.43;MQ0=41;MQRankSum=-2.151;QD=15.41;ReadPosRankSum=-3.929;VQSLOD=0.2367;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:3.87:4,0,212	0/1:8,0:6:15.42:15,0,31	0/1:4,0:1:0:0,0,0	./.	1/1:19,1:17:32.85:522,33,0	1/1:7,1:13:9.03:235,9,0	1/1:12,0:10:15.04:340,15,0	1/1:17,0:16:36.83:628,37,0	1/1:10,0:10:14.99:321,15,0	1/1:13,0:8:7.25:82,7,0	1/1:12,0:15:16.17:188,16,0	1/1:10,0:9:6.02:86,6,0	1/1:6,0:4:8.94:86,9,0	1/1:8,0:7:9.01:110,9,0	1/1:11,0:11:5.94:42,6,0	1/1:9,0:11:10.21:161,10,0	0/1:14,0:14:27.20:27,0,66	0/1:15,0:9:33.91:59,0,34	1/1:19,0:14:7.18:572,7,0	1/1:22,0:19:29.86:402,30,0	1/1:10,0:9:11.98:201,12,0	1/1:5,0:5:3.01:36,3,0	1/1:9,0:8:3.01:88,3,0	1/1:15,0:12:5.95:120,6,0	1/1:9,0:9:3.96:123,4,0	1/1:19,0:13:15.01:281,15,0	1/1:12,0:10:21.04:508,21,0	1/1:10,7:15:9.02:217,9,0
chr10	90688420	.	CG	C	142.48	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.931;DP=459;FS=6.005;HRun=3;HaplotypeScore=57.7002;InbreedingCoeff=0.7547;MQ=37.06;MQ0=88;MQRankSum=-3.242;QD=4.91;ReadPosRankSum=0.272;VQSLOD=0.2817;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:38:63.17:0,63,881	1/1:2,3:2:3.01:37,3,0	0/0:18,0:3:9.03:0,9,122	0/0:23,0:7:8.97:0,9,94	0/0:12,0:10:21.06:0,21,283	0/0:23,0:22:63.08:0,63,814	0/0:17,0:11:12.04:0,12,169	0/0:30,0:16:39.11:0,39,518	0/0:11,0:10:27.09:0,27,387	0/0:10,0:7:21.07:0,21,302	0/0:8,0:5:12.04:0,12,172	0/0:22,0:22:60.10:0,60,785	0/0:15,0:14:39.09:0,39,528	0/0:13,0:13:33.08:0,33,451	1/1:0,13:9:15.05:186,15,0	0/0:14,0:13:36.12:0,36,516	1/1:8,3:3:3.01:37,3,0	0/0:25,0:18:48.13:0,48,668	0/0:15,0:13:33.11:0,33,468	0/0:15,0:12:33.11:0,33,474	0/0:30,0:24:63.18:0,63,868	0/0:6,0:3:6.02:0,6,86	0/0:8,0:8:18.06:0,18,258	0/0:25,0:23:54.14:0,54,752	0/0:10,0:7:18.06:0,18,256	0/0:8,0:8:24:0,24,303	0/0:9,0:9:27.05:0,27,365	0/0:17,0:12:36.10:0,36,497
chr10	90689988	.	G	GAAA	7399.32	PASS	AB=0.913;AC=48;AF=0.857;AN=56;BaseQRankSum=2.220;DP=519;FS=3.057;HRun=13;HaplotypeScore=114.6858;InbreedingCoeff=0.4992;MQ=48.68;MQ0=12;MQRankSum=-4.843;QD=15.54;ReadPosRankSum=-3.365;VQSLOD=2.9989;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:18.42:0,18,571	0/1:9,0:8:0:0,0,0	0/0:8,0:5:1.82:0,2,23	0/1:1,0:1:0:0,0,0	1/1:21,4:25:19.36:220,19,0	1/1:10,11:25:28.34:447,28,0	1/1:13,9:24:28.04:414,28,0	1/1:18,4:25:6.70:412,7,0	1/1:9,10:23:24.08:401,24,0	1/1:20,0:16:12.04:182,12,0	1/1:12,0:12:9.50:136,10,0	1/1:13,0:13:27.09:380,27,0	1/1:9,0:11:9.03:141,9,0	1/1:14,0:14:27.03:372,27,0	1/1:14,0:13:15.02:202,15,0	1/1:30,0:29:46.58:579,47,0	1/1:14,0:15:18.06:259,18,0	1/1:20,4:26:34.64:483,35,0	1/1:7,7:13:30.10:487,30,0	1/1:13,1:18:14.02:145,14,0	0/1:8,7:16:3.59:188,0,4	1/1:14,0:14:15.60:151,16,0	1/1:7,7:14:14.80:217,15,0	1/1:9,12:25:34.26:489,34,0	1/1:16,0:19:25.61:343,26,0	1/1:18,2:23:17.98:198,18,0	0/1:21,0:21:15.66:150,0,16	1/1:6,7:12:24.08:402,24,0
chr10	90692044	.	T	TCAG	20270.88	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-13.019;DP=650;FS=2.182;HRun=0;HaplotypeScore=121.8696;InbreedingCoeff=0.9934;MQ=79.71;MQ0=0;MQRankSum=-6.079;QD=54.93;ReadPosRankSum=0.023;VQSLOD=6.5991;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1666	1/1:2,9:11:27.09:621,27,0	0/0:25,0:25:66.21:0,66,1096	0/0:17,0:17:45.15:0,45,680	1/1:3,25:27:63.22:1447,63,0	1/1:0,15:15:42.14:967,42,0	1/1:1,13:14:39.13:882,39,0	1/1:8,27:37:93.26:1929,93,0	1/1:1,27:29:72.25:1657,72,0	0/0:23,0:23:63.22:0,63,1075	0/0:14,0:14:27.08:0,27,432	0/0:27,0:27:78.23:0,78,1285	0/0:26,0:26:78.27:0,78,1325	0/0:19,0:19:51.17:0,51,869	1/1:1,33:35:87.30:1990,87,0	0/0:28,1:29:12.29:0,12,1206	1/1:3,16:19:51.17:1135,51,0	0/0:23,0:23:60.19:0,60,996	1/1:3,14:20:51.14:1047,51,0	1/1:1,19:21:51.18:1168,51,0	1/1:4,26:30:69.24:1548,69,0	0/0:24,0:24:53.77:0,54,893	1/1:2,20:23:48.16:1099,48,0	1/1:4,22:26:63.22:1442,63,0	0/0:21,0:21:51.13:0,51,787	1/1:3,23:27:75.26:1701,75,0	1/1:2,22:24:57:1309,57,0	1/1:0,8:10:15.05:331,15,0
chr10	90692636	.	GA	G	13726.69	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.949;DP=531;FS=4.659;HRun=5;HaplotypeScore=56.1394;InbreedingCoeff=0.9908;MQ=90.97;MQ0=0;MQRankSum=-7.669;QD=30.92;ReadPosRankSum=5.426;VQSLOD=5.1629;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:99:0,120,1640	1/1:0,10:10:30.09:340,30,0	0/0:22,0:22:63.21:0,63,860	0/0:25,0:25:72.21:0,72,914	1/1:0,18:18:54.15:612,54,0	1/1:1,20:21:54.15:610,54,0	1/1:1,16:17:48.14:544,48,0	1/1:1,32:33:96.23:1060,96,0	1/1:1,18:19:48.14:544,48,0	1/1:1,14:15:42.12:476,42,0	1/1:1,13:14:36.10:408,36,0	1/1:1,9:10:24.07:272,24,0	1/1:0,8:8:24.07:272,24,0	1/1:0,12:12:36.10:408,36,0	1/1:0,19:19:54.15:613,54,0	1/1:0,17:17:48.14:544,48,0	1/1:2,18:20:42.12:476,42,0	1/1:0,11:11:30.09:340,30,0	1/1:1,15:16:45.10:490,45,0	1/1:2,17:19:48.07:528,48,0	1/1:3,33:36:99:1123,99,0	1/1:2,11:13:30.09:340,30,0	1/1:1,24:25:69.20:783,69,0	1/1:0,21:21:57.16:647,57,0	1/1:0,7:7:21.06:238,21,0	1/1:0,30:30:90.26:1020,90,0	1/1:2,26:27:78.09:865,78,0	1/1:0,5:5:15.04:170,15,0
chr10	90693173	.	C	CA	4294.87	PASS	AB=0.657;AC=46;AF=0.852;AN=54;BaseQRankSum=-1.065;DP=272;FS=4.240;HRun=5;HaplotypeScore=73.8603;InbreedingCoeff=0.6143;MQ=61.09;MQ0=8;MQRankSum=-4.374;QD=18.75;ReadPosRankSum=-1.123;VQSLOD=4.2811;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:39.89:0,40,222	1/1:2,3:5:9.03:110,9,0	0/0:13,0:7:8.83:0,9,34	0/0:9,0:6:11.50:0,12,72	1/1:2,12:15:36.41:415,36,0	1/1:4,4:8:15.01:166,15,0	1/1:4,11:16:14.93:291,15,0	1/1:7,12:17:18.78:389,19,0	0/1:3,2:5:5.50:57,0,5	1/1:4,1:10:18.08:87,18,0	1/1:3,0:7:14.57:71,15,0	1/1:6,0:11:17.28:93,17,0	1/1:2,0:4:2.84:14,3,0	1/1:0,0:7:11.36:56,11,0	0/1:2,4:6:1.67:97,0,2	1/1:2,0:7:16.70:80,17,0	1/1:4,12:16:35.67:436,36,0	1/1:9,0:9:7.88:94,8,0	1/1:5,8:13:19.78:307,20,0	1/1:2,8:10:18.03:219,18,0	1/1:1,5:6:15.05:182,15,0	1/1:6,0:7:8.65:48,9,0	1/1:3,8:11:18.06:224,18,0	1/1:2,8:10:12.09:276,12,0	1/1:0,0:8:19.92:98,20,0	1/1:2,10:12:32.93:374,33,0	1/1:3,3:6:9.03:110,9,0	./.
chr10	90693178	.	AG	A	2641.53	PASS	AB=0.932;AC=52;AF=0.963;AN=54;BaseQRankSum=2.699;DP=262;FS=2.683;HRun=1;HaplotypeScore=70.9364;InbreedingCoeff=0.0954;MQ=65.56;MQ0=6;MQRankSum=-2.474;QD=10.08;ReadPosRankSum=-0.103;VQSLOD=1.2301;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,1:20:31.62:32,0,53	1/1:3,1:4:8.76:53,9,0	1/1:13,2:9:4.07:72,4,0	0/1:9,1:7:3.17:3,0,30	1/1:15,0:15:43.83:267,44,0	1/1:7,0:7:11.58:68,12,0	1/1:16,0:16:29.27:185,29,0	1/1:22,0:21:45.81:301,46,0	1/1:5,0:5:5.58:48,6,0	1/1:9,0:9:5.56:78,6,0	1/1:7,0:7:15.57:72,16,0	1/1:10,0:10:19.50:102,19,0	1/1:3,0:3:2.74:12,3,0	1/1:7,0:7:11.20:55,11,0	1/1:6,0:6:6.42:53,6,0	1/1:7,0:7:15.76:66,16,0	1/1:15,0:15:39.89:214,40,0	1/1:8,0:8:11.94:80,12,0	1/1:11,0:11:27.46:178,27,0	1/1:9,0:9:19.95:107,20,0	1/1:6,0:6:14.59:86,15,0	1/1:5,0:5:6.34:33,6,0	1/1:9,0:9:19.59:120,20,0	1/1:9,0:9:19.86:126,20,0	1/1:8,0:8:19.37:89,19,0	1/1:14,0:14:28.83:170,29,0	1/1:4,0:4:11.77:73,12,0	./.
chr10	90693891	.	A	AT	2283.55	PASS	AB=1.000;AC=47;AF=0.870;AN=54;BaseQRankSum=-3.334;DP=208;FS=22.295;HRun=2;HaplotypeScore=36.0950;InbreedingCoeff=0.3673;MQ=53.10;MQ0=6;MQRankSum=-2.890;QD=12.41;ReadPosRankSum=1.334;VQSLOD=0.5597;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:15.97:0,16,87	1/1:3,0:3:8.31:49,8,0	0/1:34,0:3:9.07:9,0,11	0/0:10,0:2:0.58:0,1,1	1/1:5,0:6:14.85:104,15,0	1/1:5,1:6:17.58:127,18,0	1/1:6,0:6:14.77:96,15,0	1/1:11,0:11:20.39:136,20,0	1/1:1,0:1:2.98:21,3,0	1/1:11,0:11:21.03:180,21,0	1/1:7,0:7:17.08:118,17,0	1/1:3,0:3:8.90:60,9,0	1/1:2,0:2:2.97:20,3,0	1/1:2,0:2:5.93:40,6,0	1/1:8,0:8:20.62:135,21,0	0/1:5,0:5:3.84:67,0,4	1/1:10,0:10:26.28:162,26,0	./.	1/1:9,1:10:22.17:188,22,0	1/1:1,7:8:8.95:77,9,0	0/1:1,0:1:0:0,0,0	1/1:0,2:2:3.01:36,3,0	1/1:5,1:6:11.90:101,12,0	1/1:4,1:5:11.32:85,11,0	1/1:12,0:12:8.87:122,9,0	1/1:11,0:10:26.79:211,27,0	1/1:4,2:6:17.41:134,17,0	1/1:7,1:8:11.99:119,12,0
chr10	90694875	.	GA	G	4807.25	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=5.208;DP=523;FS=9.244;HRun=12;HaplotypeScore=76.5763;InbreedingCoeff=0.9194;MQ=69.45;MQ0=5;MQRankSum=0.091;QD=11.84;ReadPosRankSum=0.640;VQSLOD=4.0278;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:56.94:0,57,544	0/0:6,0:7:20.88:0,21,195	0/0:22,0:12:6.18:0,6,113	0/0:23,0:12:3.15:0,3,85	1/1:4,17:22:50.31:376,50,0	1/1:3,19:22:20.37:341,20,0	1/1:3,13:16:32.87:255,33,0	1/1:4,23:27:62.64:475,63,0	1/1:0,8:8:14.94:116,15,0	1/1:7,0:29:40.04:115,40,0	1/1:2,0:10:16.29:47,16,0	1/1:1,0:20:34.62:100,35,0	1/1:0,0:6:10.19:29,10,0	1/1:1,0:18:30.55:88,31,0	0/0:22,1:23:27.86:0,28,464	1/1:1,0:17:22.40:65,22,0	0/0:22,1:23:22.31:0,22,559	1/1:1,0:20:24.44:71,24,0	1/1:9,22:31:34.78:473,35,0	1/1:1,22:23:59.67:458,60,0	1/1:3,10:13:26.88:209,27,0	1/1:2,0:17:22.39:65,22,0	1/1:3,17:20:44.82:349,45,0	1/1:2,8:10:17.93:139,18,0	1/1:4,0:19:24.21:70,24,0	1/1:2,27:32:86.77:641,87,0	1/1:2,12:13:23.91:186,24,0	1/1:2,8:10:17.92:139,18,0
chr10	90696111	.	C	CT	2367.78	PASS	AB=0.892;AC=32;AF=0.640;AN=50;BaseQRankSum=-2.732;DP=509;FS=0.517;HRun=15;HaplotypeScore=102.6435;InbreedingCoeff=-0.1273;MQ=71.30;MQ0=2;MQRankSum=0.171;QD=5.26;ReadPosRankSum=-3.066;VQSLOD=1.7924;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:26:16.13:0,16,46	./.	0/0:32,0:18:7.41:0,7,53	0/1:21,0:11:4.14:4,0,9	0/1:9,8:17:27.11:108,0,27	0/1:7,14:21:39.11:140,0,39	1/1:5,9:14:11.87:198,12,0	1/1:17,24:43:54.31:398,54,0	0/1:8,10:18:0.76:117,0,1	0/1:22,1:23:3.91:90,0,4	1/1:16,0:16:11.16:60,11,0	0/1:16,0:16:9.95:10,0,35	0/1:13,1:15:20.70:21,0,23	0/1:11,0:11:5.70:6,0,22	./.	0/1:23,1:23:39.03:39,0,54	./.	0/1:20,0:21:28.05:28,0,58	0/1:14,0:16:7.57:64,0,8	1/1:1,13:15:23.75:179,24,0	1/1:10,6:16:12.04:186,12,0	0/1:13,0:13:11.42:11,0,12	1/1:8,4:13:6.19:144,6,0	1/1:1,5:7:14.67:104,15,0	0/1:26,1:27:24.73:37,0,25	1/1:21,12:33:30.74:225,31,0	0/1:29,5:35:99:224,0,120	1/1:3,8:12:18.14:130,18,0
chr10	90696546	.	A	ACTGT	35556.48	PASS	AC=44;AF=0.880;AN=50;BaseQRankSum=-11.381;DP=628;FS=2.463;HRun=0;HaplotypeScore=108.8699;InbreedingCoeff=0.9939;MQ=86.60;MQ0=0;MQRankSum=-10.811;QD=67.47;ReadPosRankSum=3.498;VQSLOD=6.9803;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,2704	./.	0/0:25,0:25:67.93:0,68,1194	0/0:27,0:27:63.19:0,63,1083	1/1:2,13:16:36.12:948,36,0	1/1:0,21:21:60.21:1635,60,0	1/1:4,22:26:66.23:1754,66,0	1/1:12,25:39:99:2770,108,0	1/1:2,16:19:48.16:1267,48,0	1/1:4,22:26:72.25:1919,72,0	1/1:2,9:11:30.10:805,30,0	1/1:2,27:29:72.25:1929,72,0	1/1:3,22:27:59.97:1618,60,0	1/1:2,18:21:60.21:1610,60,0	./.	1/1:3,32:36:96.33:2615,96,0	./.	1/1:5,20:25:60.21:1630,60,0	1/1:7,15:22:63.22:1628,63,0	1/1:5,17:26:54.19:1422,54,0	1/1:4,15:22:42.14:1150,42,0	1/1:2,16:20:47.95:1297,48,0	1/1:3,12:15:33.11:873,33,0	1/1:2,19:21:42.09:1150,42,0	1/1:2,25:27:72.25:1947,72,0	1/1:5,32:39:99:2976,114,0	1/1:4,24:31:84.29:2236,84,0	1/1:1,5:6:15.05:378,15,0
chr10	90697498	.	C	CT	3969.39	PASS	AB=0.636;AC=24;AF=0.480;AN=50;BaseQRankSum=-11.572;DP=480;FS=5.041;HRun=12;HaplotypeScore=72.1416;InbreedingCoeff=0.7598;MQ=71.94;MQ0=0;MQRankSum=0.941;QD=16.61;ReadPosRankSum=-1.645;VQSLOD=4.2671;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:40:85.37:0,85,609	./.	0/0:20,0:17:11.16:0,11,144	0/0:16,0:13:15.93:0,16,106	1/1:5,15:24:24.85:319,25,0	1/1:2,15:17:20.16:357,20,0	1/1:5,12:17:0.21:282,0,0	1/1:6,15:19:42.03:395,42,0	1/1:2,12:14:5.13:212,5,0	0/0:5,0:21:29.89:0,30,88	0/0:3,0:17:26.97:0,27,82	0/0:7,0:23:26.44:0,26,76	0/0:3,0:20:24.44:0,24,71	0/0:1,0:16:20.36:0,20,59	./.	0/0:1,0:19:31.46:0,31,101	./.	0/0:1,0:17:24.44:0,24,71	1/1:7,20:29:65.71:588,66,0	1/1:1,12:13:33.94:320,34,0	0/1:10,11:22:14.04:176,0,14	0/0:5,0:13:12.20:0,12,35	1/1:4,13:17:30:282,30,0	1/1:4,15:19:11.14:270,11,0	0/0:1,0:18:30.55:0,31,88	1/1:5,11:16:32.94:296,33,0	1/1:5,20:24:13.32:400,13,0	0/1:2,3:5:28.79:73,0,29
chr10	90698363	.	TAAGA	T	178.14	PASS	AB=0.801;AC=4;AF=0.087;AN=46;BaseQRankSum=3.284;DP=162;FS=0.000;HRun=0;HaplotypeScore=21.5694;InbreedingCoeff=-0.1968;MQ=54.29;MQ0=22;MQRankSum=-2.944;QD=4.69;ReadPosRankSum=0.578;VQSLOD=1.0062;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:5:15.05:0,15,303	./.	0/0:28,0:4:4.57:0,5,134	0/1:22,0:3:23.43:30,0,23	0/0:6,0:5:3.55:0,4,284	0/0:5,0:5:12.04:0,12,304	0/0:2,0:2:6.02:0,6,143	0/0:15,0:9:7.16:0,7,291	0/0:5,0:5:9.03:0,9,233	0/0:4,0:3:9.03:0,9,197	0/1:2,2:3:64.97:104,0,65	0/1:3,1:4:49.56:50,0,68	0/0:3,0:3:9.03:0,9,202	0/0:1,0:1:3.01:0,3,72	./.	0/0:5,0:5:12.04:0,12,277	./.	0/0:6,0:5:15.05:0,15,334	0/0:7,1:6:11.97:0,12,220	0/0:5,0:4:3.63:0,4,144	0/0:3,0:3:1.28:0,1,71	0/0:3,0:2:6.02:0,6,129	./.	./.	0/1:5,2:6:96.11:96,0,207	0/0:3,0:3:3.01:0,3,74	0/0:6,0:7:1.76:0,2,205	0/0:6,0:4:9.03:0,9,162
chr10	90699359	.	GA	G	929.31	PASS	AB=0.867;AC=7;AF=0.125;AN=56;BaseQRankSum=7.487;DP=547;FS=1.063;HRun=11;HaplotypeScore=53.0043;InbreedingCoeff=0.7316;MQ=62.90;MQ0=5;MQRankSum=0.179;QD=13.09;ReadPosRankSum=2.328;VQSLOD=3.5418;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:39:92.97:0,93,943	1/1:0,10:10:29.97:246,30,0	0/0:15,0:9:14.77:0,15,134	0/0:12,0:6:8:0,8,114	0/0:18,1:19:20.73:0,21,409	0/0:17,0:17:17.58:0,18,383	0/0:13,0:13:39.06:0,39,402	0/0:35,1:36:64.25:0,64,841	0/0:17,0:16:42.09:0,42,440	0/0:17,1:18:17.44:0,17,380	0/0:17,0:17:23.83:0,24,453	0/0:17,1:18:10.85:0,11,353	0/0:15,0:15:42.10:0,42,440	0/1:10,2:13:16.37:16,0,237	1/1:3,19:23:40.99:326,41,0	0/0:12,1:13:11.44:0,11,321	1/1:4,21:25:59.90:488,60,0	0/0:29,0:29:78.16:0,78,820	0/0:20,2:20:10.86:0,11,526	0/0:22,0:22:47.91:0,48,492	0/0:7,0:7:21.05:0,21,224	0/0:11,0:11:27.07:0,27,287	0/0:10,1:11:2.26:0,2,214	0/0:17,1:18:23.46:0,23,447	0/0:22,0:21:51.13:0,51,543	0/0:38,2:40:74.58:0,75,978	0/0:19,1:22:35.38:0,35,566	0/0:22,0:22:63.16:0,63,671
chr10	90699604	.	G	GA	5251.33	PASS	AB=0.909;AC=19;AF=0.339;AN=56;BaseQRankSum=-8.978;DP=550;FS=9.496;HRun=8;HaplotypeScore=59.0726;InbreedingCoeff=0.9121;MQ=78.86;MQ0=0;MQRankSum=0.097;QD=28.08;ReadPosRankSum=3.379;VQSLOD=5.0124;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,1:44:99:0,108,967	0/0:6,0:6:17.98:0,18,158	0/1:18,2:19:12.18:12,0,172	0/0:12,0:12:16.06:0,16,160	0/0:27,0:27:72:0,72,647	0/0:22,0:22:60.01:0,60,545	0/0:22,0:22:60.03:0,60,548	0/0:20,0:20:54.01:0,54,488	0/0:22,0:22:63.01:0,63,568	1/1:3,10:13:30.09:347,30,0	1/1:4,15:19:54.10:592,54,0	1/1:4,28:32:78.23:901,78,0	1/1:0,21:21:60.11:675,60,0	1/1:2,15:17:51.13:570,51,0	0/0:33,0:33:96.04:0,96,874	1/1:2,21:23:66.16:748,66,0	0/0:25,0:25:63.02:0,63,576	1/1:3,24:26:78.18:885,78,0	0/0:13,0:13:33.01:0,33,302	0/0:9,0:9:24.01:0,24,219	0/0:13,0:14:34.78:0,35,302	1/1:0,3:3:9.03:104,9,0	0/0:13,0:13:38.86:0,39,343	0/0:22,0:22:60.02:0,60,549	1/1:0,12:12:36.11:417,36,0	0/0:25,0:25:66.02:0,66,604	0/0:18,0:18:51.03:0,51,466	0/0:16,0:16:48.03:0,48,439
chr10	90699686	.	C	CCCGT	10137.41	PASS	AB=0.957;AC=19;AF=0.339;AN=56;BaseQRankSum=-9.653;DP=606;FS=5.644;HRun=0;HaplotypeScore=95.7740;InbreedingCoeff=0.9164;MQ=74.82;MQ0=1;MQRankSum=-5.209;QD=54.50;ReadPosRankSum=1.468;VQSLOD=6.2094;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,105,1959	0/0:13,0:13:39.12:0,39,697	0/0:22,0:22:57.18:0,57,996	0/0:18,0:18:39.09:0,39,657	0/0:20,0:20:60.18:0,60,1054	0/0:24,0:24:69.24:0,69,1288	0/0:33,0:33:87.28:0,87,1565	0/0:37,0:37:93.29:0,93,1616	0/0:18,0:18:48.16:0,48,886	1/1:3,15:18:51.17:1296,51,0	1/1:6,6:12:15.05:400,15,0	1/1:8,12:20:48.16:1191,48,0	1/1:4,15:19:54.19:1417,54,0	1/1:3,13:15:45.14:1082,45,0	0/0:30,0:30:84.26:0,84,1471	1/1:2,11:13:36.12:917,36,0	0/0:42,0:42:99:0,120,2197	1/1:3,32:37:84.29:2140,84,0	0/0:15,0:15:39.13:0,39,717	0/0:15,0:15:42.14:0,42,784	0/0:22,0:22:60.20:0,60,1084	1/1:2,7:10:21.07:559,21,0	0/0:5,0:5:15.04:0,15,250	0/0:31,0:31:87.28:0,87,1580	1/1:0,15:16:42.14:1118,42,0	0/1:21,1:22:16.78:17,0,1052	0/0:17,0:17:51.17:0,51,952	0/0:19,0:19:54.19:0,54,1008
chr10	90700965	.	TTTTC	T	4238.61	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=12.439;DP=545;FS=3.290;HRun=0;HaplotypeScore=98.1877;InbreedingCoeff=0.9321;MQ=69.56;MQ0=2;MQRankSum=-6.414;QD=27.52;ReadPosRankSum=1.131;VQSLOD=4.4974;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,102,2435	0/0:8,0:8:21.07:0,21,493	0/0:24,0:19:17.97:0,18,416	0/1:19,0:13:4.79:5,0,96	0/0:14,0:14:36.11:0,36,787	0/0:30,0:30:81.26:0,81,1942	0/0:12,0:12:30.09:0,30,690	0/0:29,0:29:54.15:0,54,1124	0/0:18,0:18:51.16:0,51,1171	1/1:6,12:18:36.12:607,36,0	1/1:4,7:11:21.07:333,21,0	1/1:2,18:20:48.16:814,48,0	1/1:3,9:12:24.08:407,24,0	1/1:4,11:14:18.06:305,18,0	0/0:28,0:28:78.22:0,78,1746	1/1:3,12:15:21.07:356,21,0	0/0:29,0:29:72.20:0,72,1651	1/1:4,14:18:33.05:501,33,0	0/0:25,0:25:45.13:0,45,1014	0/0:10,0:10:24.07:0,24,542	0/0:24,0:24:60.19:0,60,1375	1/1:0,7:7:18.06:303,18,0	0/0:17,0:17:51.16:0,51,1204	0/0:20,0:20:44.91:0,45,849	1/1:2,17:19:36.12:610,36,0	0/0:22,0:22:60.03:0,60,1357	0/0:33,0:33:84.25:0,84,1949	0/0:9,0:9:18.06:0,18,380
chr10	90701150	.	AT	A	5473.75	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-3.002;DP=536;FS=0.000;HRun=10;HaplotypeScore=75.4775;InbreedingCoeff=0.9286;MQ=73.15;MQ0=0;MQRankSum=0.988;QD=19.62;ReadPosRankSum=-1.023;VQSLOD=5.1960;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.19:0,84,907	0/0:9,0:9:27.07:0,27,299	0/1:14,0:12:11.09:11,0,49	0/0:13,0:10:12.71:0,13,89	1/1:4,17:21:50.92:434,51,0	1/1:2,18:20:47.99:417,48,0	1/1:1,14:15:35.99:313,36,0	1/1:8,23:31:68.82:584,69,0	1/1:2,23:25:62.98:547,63,0	0/0:1,0:15:39.89:0,40,202	0/0:2,0:16:42.81:0,43,232	0/0:2,0:15:34.09:0,34,170	0/0:4,0:16:31.14:0,31,156	0/0:3,0:13:20.05:0,20,118	0/0:24,0:24:63.16:0,63,689	0/0:3,0:14:31.25:0,31,156	0/0:37,0:37:99:0,108,1183	0/0:3,0:20:45.58:0,46,233	1/1:4,19:24:58.79:491,59,0	1/1:3,17:20:50.90:434,51,0	1/1:2,9:11:23.99:208,24,0	0/0:4,0:15:34.27:0,34,187	1/1:2,21:23:59.98:521,60,0	1/1:5,13:18:38.98:339,39,0	0/0:4,0:19:40.11:0,40,237	1/1:3,17:21:39.54:416,40,0	1/1:3,20:23:58.53:499,59,0	1/1:3,10:13:29.99:260,30,0
chr10	90702466	.	TC	T	1698.18	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.530;DP=553;FS=0.000;HRun=4;HaplotypeScore=55.5897;InbreedingCoeff=0.9777;MQ=81.03;MQ0=0;MQRankSum=-2.189;QD=27.84;ReadPosRankSum=2.611;VQSLOD=3.1318;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:69.22:0,69,948	1/1:0,3:3:9.03:108,9,0	0/0:19,0:19:57.14:0,57,743	0/0:15,0:15:27.05:0,27,335	0/0:14,0:14:39.12:0,39,527	0/0:18,0:18:48.16:0,48,671	0/0:24,0:24:69.23:0,69,966	0/0:42,0:42:99:0,117,1533	0/0:14,0:14:42.13:0,42,572	0/0:23,0:23:66.18:0,66,902	0/0:14,0:14:39.13:0,39,543	0/0:20,0:20:57.18:0,57,783	0/0:14,0:14:36.08:0,36,482	0/0:20,0:20:57.19:0,57,798	1/1:2,23:25:63.19:756,63,0	0/0:21,0:21:54.17:0,54,732	1/1:3,30:33:81.25:972,81,0	0/0:13,0:13:39.13:0,39,545	0/0:23,0:23:57.17:0,57,767	0/0:19,0:19:57.19:0,57,796	0/0:19,0:19:54.18:0,54,755	0/0:17,0:17:48.15:0,48,643	0/0:15,0:15:42.14:0,42,588	0/0:29,0:29:78.26:0,78,1092	0/0:24,0:24:63.19:0,63,861	0/0:23,0:23:69.23:0,69,966	0/0:16,0:16:48.12:0,48,650	0/0:8,0:8:24.08:0,24,336
chr10	90702562	.	T	TGG	512.03	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.058;DP=573;FS=2.265;HRun=0;HaplotypeScore=94.1626;InbreedingCoeff=0.8957;MQ=53.45;MQ0=25;MQRankSum=-4.798;QD=9.85;ReadPosRankSum=4.875;VQSLOD=3.4884;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:45.11:0,45,560	1/1:6,2:10:11.77:180,12,0	0/0:55,0:5:10.61:0,11,151	0/0:49,0:11:9.52:0,10,146	0/0:25,0:24:59.26:0,59,534	0/0:23,0:21:63.08:0,63,735	0/0:12,0:11:29.65:0,30,290	0/0:30,0:30:76.41:0,76,828	0/0:9,0:9:23.65:0,24,255	0/0:15,0:14:35.49:0,35,392	0/0:11,0:10:17.71:0,18,141	0/0:16,0:15:18:0,18,197	0/0:10,0:10:11.97:0,12,133	0/0:13,0:11:20.90:0,21,219	1/1:22,2:26:48.10:318,48,0	0/0:16,0:15:26.80:0,27,257	1/1:12,3:15:9.80:147,10,0	0/0:17,0:13:29.94:0,30,333	0/0:19,0:16:42.08:0,42,486	0/0:19,0:19:50.20:0,50,488	0/0:5,0:4:8.49:0,8,71	0/0:19,0:19:44.63:0,45,430	0/0:23,0:23:65.43:0,65,679	0/0:11,0:10:20.45:0,20,187	0/0:18,0:17:44.36:0,44,433	0/0:32,0:30:83.98:0,84,868	0/0:27,0:27:30.02:0,30,352	0/0:29,0:27:42.04:0,42,502
chr10	90703340	.	A	ACACT	28296.32	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-8.566;DP=545;FS=9.058;HRun=0;HaplotypeScore=84.5051;InbreedingCoeff=0.9642;MQ=77.06;MQ0=0;MQRankSum=-5.525;QD=58.83;ReadPosRankSum=2.431;VQSLOD=6.2453;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.23:0,84,1504	1/1:0,5:6:12.04:297,12,0	0/0:21,0:21:57.17:0,57,977	0/0:13,0:13:28.50:0,28,427	1/1:1,10:12:24:526,24,0	1/1:3,15:19:42.08:1025,42,0	1/1:3,20:23:48.10:1240,48,0	1/1:6,17:24:63.22:1639,63,0	1/1:1,21:23:57.20:1560,57,0	1/1:0,13:14:42.08:930,42,0	1/1:1,8:9:24:544,24,0	1/1:3,16:19:48.16:1254,48,0	1/1:2,19:22:45.15:1228,45,0	1/1:1,27:28:50.88:1934,51,0	1/1:6,25:31:63.15:1658,63,0	1/1:1,13:16:39.13:1059,39,0	1/1:7,22:29:75.12:1922,75,0	1/1:9,14:23:57.15:1401,57,0	1/1:2,12:18:53.85:1081,54,0	1/1:3,10:14:29.95:685,30,0	1/1:3,33:38:84.29:2244,84,0	1/1:0,8:13:18.31:400,18,0	1/1:2,10:13:27.09:697,27,0	1/1:0,19:19:35.95:985,36,0	1/1:7,13:20:51.11:1204,51,0	1/1:0,18:21:63.06:1466,63,0	1/1:0,20:21:41.73:1072,42,0	1/1:0,5:5:9.03:246,9,0
chr10	90703438	.	T	TC	9825.97	PASS	AB=0.923;AC=25;AF=0.446;AN=56;BaseQRankSum=-13.257;DP=558;FS=0.666;HRun=1;HaplotypeScore=53.9114;InbreedingCoeff=0.9185;MQ=74.98;MQ0=0;MQRankSum=-0.737;QD=35.35;ReadPosRankSum=2.998;VQSLOD=4.7711;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.27:0,84,1087	1/1:0,6:6:15.05:224,15,0	0/0:11,0:11:10.21:0,10,171	0/0:13,0:13:27.36:0,27,244	0/0:9,0:9:27.09:0,27,350	0/0:19,0:19:54.18:0,54,700	0/0:34,0:34:99:0,102,1247	0/0:22,0:22:60.07:0,60,720	0/0:17,0:17:41.95:0,42,501	1/1:0,24:24:72.13:1010,72,0	1/1:0,14:14:33.11:484,33,0	1/1:0,29:29:78.26:1166,78,0	1/1:2,10:12:36.06:493,36,0	1/1:0,12:12:33.11:493,33,0	1/1:5,22:27:78.22:1090,78,0	1/1:0,28:28:69.23:1033,69,0	1/1:0,34:34:84.28:1257,84,0	1/1:0,37:37:93.32:1392,93,0	0/0:13,0:13:33.10:0,33,416	0/0:17,0:17:44.16:0,44,535	0/0:25,0:25:72.18:0,72,912	1/1:0,13:14:39.13:573,39,0	0/0:14,0:14:42.14:0,42,544	0/0:32,0:32:87.25:0,87,1098	1/1:0,17:17:39.13:584,39,0	0/1:22,2:24:26.63:27,0,676	0/0:17,0:17:48.08:0,48,573	0/0:8,0:8:21.07:0,21,272
chr10	90705380	.	C	CCAAA	2334.44	PASS	AB=0.616;AC=20;AF=0.357;AN=56;BaseQRankSum=0.840;DP=547;FS=3.003;HRun=0;HaplotypeScore=119.4246;InbreedingCoeff=-0.2680;MQ=55.68;MQ0=20;MQRankSum=-3.081;QD=6.79;ReadPosRankSum=-0.875;VQSLOD=2.7122;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,2158	1/1:1,0:8:14.82:113,15,0	0/0:13,0:8:2.10:0,2,195	0/0:19,0:10:16.51:0,17,283	0/1:10,0:27:69.23:69,0,139	0/0:7,0:21:13.11:0,13,130	0/0:8,0:17:12.82:0,13,62	0/1:6,0:27:32.48:32,0,177	0/0:2,0:16:17.73:0,18,64	0/1:7,1:25:73.98:386,0,74	0/1:7,0:19:39.22:207,0,39	0/1:8,0:21:99:143,0,111	0/1:13,0:16:92.47:129,0,92	0/1:2,0:9:23.83:54,0,24	0/1:8,0:17:56.50:193,0,57	0/1:5,0:13:5.60:177,0,6	0/1:5,0:14:21.15:72,0,21	0/1:10,0:19:56.53:201,0,57	0/0:15,0:22:1.28:0,1,224	0/1:4,0:19:16.30:16,0,101	0/0:5,0:8:14.92:0,15,62	1/1:4,0:15:10.05:337,10,0	0/1:4,0:19:20.01:20,0,78	0/1:6,0:12:3.51:4,0,89	0/1:4,0:21:44.30:329,0,44	0/1:17,0:31:14.88:15,0,204	0/0:10,0:29:26.62:0,27,241	0/0:1,0:9:10.88:0,11,56
chr10	90705871	.	T	TAA	4058.32	PASS	AB=0.967;AC=19;AF=0.339;AN=56;BaseQRankSum=12.402;DP=622;FS=11.392;HRun=11;HaplotypeScore=91.2379;InbreedingCoeff=0.9031;MQ=72.50;MQ0=8;MQRankSum=-0.623;QD=19.23;ReadPosRankSum=1.438;VQSLOD=1.6832;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,153,1467	0/0:7,0:7:18.03:0,18,175	0/1:57,0:21:24.33:24,0,144	0/0:47,0:19:15.33:0,15,230	0/0:24,0:25:41.92:0,42,457	0/0:29,0:29:75.09:0,75,721	0/0:19,0:19:48.04:0,48,459	0/0:35,0:36:77.78:0,78,739	0/0:16,0:16:42.04:0,42,402	1/1:4,17:23:50.56:621,51,0	1/1:4,14:20:50.08:635,50,0	1/1:4,6:11:15.05:216,15,0	1/1:1,7:8:11.85:173,12,0	1/1:1,10:11:24.08:347,24,0	0/0:15,0:15:39.03:0,39,378	1/1:2,9:11:14.90:217,15,0	0/0:27,0:28:80.85:0,81,763	1/1:6,26:32:66.16:913,66,0	0/0:22,0:22:54.06:0,54,523	0/0:18,0:18:42.04:0,42,407	0/0:15,0:15:45.07:0,45,436	1/1:4,13:17:39.13:544,39,0	0/0:13,0:13:30.03:0,30,291	0/0:15,0:15:36.04:0,36,349	1/1:4,14:18:27.05:367,27,0	0/0:21,1:22:13.62:0,14,480	0/0:19,0:19:42.03:0,42,407	0/0:8,0:9:26.78:0,27,245
chr10	90706242	.	A	AAAAC	6374.11	PASS	AB=0.571;AC=17;AF=0.304;AN=56;BaseQRankSum=7.046;DP=643;FS=13.817;HRun=0;HaplotypeScore=161.7638;InbreedingCoeff=0.9086;MQ=56.33;MQ0=1;MQRankSum=-11.507;QD=32.69;ReadPosRankSum=2.519;VQSLOD=4.3660;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:72.68:0,73,1196	0/0:12,0:12:20.95:0,21,307	0/0:39,0:24:48.62:0,49,795	0/0:27,0:20:49.77:0,50,698	0/0:18,0:18:54.18:0,54,950	0/0:15,0:15:39.03:0,39,621	0/0:15,0:15:33.11:0,33,571	0/0:26,0:25:63.16:0,63,943	0/0:26,0:26:75.24:0,75,1305	1/1:5,20:25:48.03:897,48,0	1/1:1,20:21:54.08:1240,54,0	1/1:4,13:18:18.53:421,19,0	1/1:6,17:23:33.58:766,34,0	1/1:4,13:20:24.55:560,25,0	0/0:28,0:28:69.09:0,69,1056	0/1:5,14:20:27.38:553,0,27	0/0:25,0:24:66.08:0,66,973	1/1:6,13:19:12.44:238,12,0	0/0:25,0:23:57.15:0,57,869	0/0:23,0:23:69.21:0,69,1130	0/0:17,0:17:45.15:0,45,791	1/1:12,11:23:50.18:982,50,0	0/0:15,0:15:42.12:0,42,697	0/0:22,0:21:51.09:0,51,827	1/1:3,22:26:30.10:716,30,0	0/0:38,2:40:40.98:0,41,1793	0/0:28,0:28:75.24:0,75,1269	0/0:14,0:14:42.14:0,42,755
chr10	90706267	.	AAAAG	A	1980.39	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-0.743;DP=639;FS=3.673;HRun=0;HaplotypeScore=219.8297;InbreedingCoeff=0.9946;MQ=60.27;MQ0=1;MQRankSum=-5.818;QD=37.37;ReadPosRankSum=2.422;VQSLOD=3.6396;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:75.26:0,75,1856	1/1:0,12:12:29.93:517,30,0	0/0:37,0:26:21.42:0,21,679	0/0:29,0:23:44.83:0,45,817	0/0:28,0:28:72.25:0,72,1772	0/0:18,0:18:48.15:0,48,1094	0/0:11,0:11:30.09:0,30,692	0/0:29,0:29:72.24:0,72,1569	0/0:28,0:28:81.26:0,81,1878	0/0:23,0:23:61.17:0,61,1213	0/0:23,0:23:55.34:0,55,1168	0/0:18,0:18:33.11:0,33,793	0/0:23,0:23:54.05:0,54,1197	0/0:18,0:18:24.97:0,25,570	1/1:0,20:20:51.13:849,51,0	0/0:22,0:22:36.94:0,37,804	1/1:5,16:20:45.15:757,45,0	0/0:10,0:10:18.06:0,18,424	0/0:22,0:22:54.18:0,54,1280	0/0:26,0:26:75.24:0,75,1753	0/0:20,0:20:54.17:0,54,1203	0/0:22,0:22:61.30:0,61,1254	0/0:17,0:17:39.13:0,39,905	0/0:23,0:24:54.18:0,54,1253	0/0:23,0:23:36.05:0,36,799	0/0:42,0:42:99:0,108,2645	0/0:25,0:25:72.25:0,72,1746	0/0:16,0:16:36.11:0,36,825
chr10	90706826	.	C	CAAAA	5537.94	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-0.881;DP=668;FS=31.805;HRun=8;HaplotypeScore=116.1690;InbreedingCoeff=0.9972;MQ=72.60;MQ0=1;MQRankSum=-4.559;QD=33.36;ReadPosRankSum=-2.452;VQSLOD=0.6854;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,1725	0/0:10,0:10:27.09:0,27,409	0/0:23,0:22:35.98:0,36,596	0/0:20,0:18:29.02:0,29,349	0/0:35,0:35:90.27:0,90,1340	0/0:27,0:27:72.22:0,72,1087	0/0:31,0:31:81.18:0,81,1132	0/0:19,0:20:46.34:0,46,664	0/0:26,0:26:72.22:0,72,1069	1/1:4,17:26:63.06:1196,63,0	1/1:7,12:20:33.06:651,33,0	1/1:8,17:27:42.14:894,42,0	1/1:4,16:21:24.01:461,24,0	1/1:6,13:20:29.23:478,29,0	0/0:32,0:33:93.22:0,93,1321	1/1:4,13:19:24.08:521,24,0	0/0:27,0:27:72.21:0,72,1063	1/1:2,7:12:24.08:553,24,0	0/0:36,0:36:93.20:0,93,1299	0/0:24,0:24:66.21:0,66,984	0/0:39,0:38:99:0,105,1535	1/1:2,6:8:20.94:304,21,0	0/0:20,0:20:48.14:0,48,726	0/0:19,0:19:54.08:0,54,747	1/1:4,8:12:21.07:481,21,0	0/0:25,0:25:69.21:0,69,1041	0/0:32,0:31:76.23:0,76,1085	0/0:11,0:11:30.08:0,30,431
chr10	90707294	.	TG	T	3146.99	PASS	AB=0.652;AC=9;AF=0.161;AN=56;BaseQRankSum=13.558;DP=612;FS=0.000;HRun=1;HaplotypeScore=130.4778;InbreedingCoeff=-0.1917;MQ=54.58;MQ0=9;MQRankSum=-10.758;QD=16.48;ReadPosRankSum=3.365;VQSLOD=3.9429;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.92:0,85,1291	0/0:11,0:11:15.31:0,15,291	0/0:17,0:11:33.04:0,33,449	0/0:19,0:13:36.11:0,36,514	0/0:22,0:22:62.12:0,62,864	0/0:19,0:19:51.16:0,51,770	0/0:21,0:21:62:0,62,884	0/0:25,0:25:75.25:0,75,1126	0/0:21,0:21:63.15:0,63,955	0/1:11,11:22:99:309,0,297	0/1:8,7:15:99:232,0,250	0/1:5,14:19:66.57:476,0,67	0/1:10,11:21:99:403,0,223	0/1:11,12:23:99:428,0,226	0/0:36,0:36:72.13:0,72,981	0/1:16,16:32:99:554,0,374	0/0:25,0:25:54.16:0,54,734	0/1:15,8:23:99:233,0,503	0/0:22,0:20:57.65:0,58,835	0/0:23,0:23:69.23:0,69,1048	0/0:25,0:25:72.24:0,72,1102	0/1:11,12:23:99:357,0,379	0/0:26,0:26:78.25:0,78,1190	0/0:22,0:22:63.21:0,63,969	0/1:3,10:13:26.20:296,0,26	0/0:21,0:21:60.19:0,60,921	0/0:23,0:22:66.22:0,66,1020	0/0:13,0:12:36.12:0,36,557
chr10	90707299	.	TTGTTGTTGTTTTG	T	10850.94	PASS	AB=0.793;AC=17;AF=0.304;AN=56;BaseQRankSum=16.124;DP=598;FS=9.566;HRun=0;HaplotypeScore=245.1303;InbreedingCoeff=0.9550;MQ=56.72;MQ0=9;MQRankSum=-11.520;QD=57.41;ReadPosRankSum=1.614;VQSLOD=2.7205;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:82.46:0,82,3977	0/0:11,0:11:17.28:0,17,763	0/0:17,0:12:36.04:0,36,829	0/0:16,0:10:30.09:0,30,730	0/0:20,0:20:55.07:0,55,2479	0/0:17,0:17:51.12:0,51,2381	0/0:22,0:22:66.17:0,66,2332	0/0:24,0:24:66.22:0,66,2518	0/0:24,0:24:72.25:0,72,3378	1/1:14,8:22:46.92:1353,47,0	1/1:10,4:14:38.15:627,38,0	1/1:11,9:20:43.86:1359,44,0	1/1:11,9:20:23.05:1186,23,0	1/1:10,10:20:43.23:1308,43,0	0/0:34,0:34:56.97:0,57,2839	1/1:18,14:32:32.24:1822,32,0	0/0:24,0:24:48.11:0,48,2275	0/1:17,6:23:0.10:837,0,0	0/0:19,0:17:29.37:0,29,1646	0/0:23,0:23:69.22:0,69,2963	0/0:24,0:24:69.07:0,69,2944	1/1:17,9:26:21.84:1261,22,0	0/0:26,0:26:75.26:0,75,3984	0/0:23,0:23:66.21:0,66,2836	1/1:3,9:12:28.45:1097,28,0	0/0:20,0:20:60.21:0,60,2836	0/0:25,0:24:72.25:0,72,3451	0/0:12,0:11:27.09:0,27,1761
chr10	90707301	.	G	GTTA	2149.17	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.252;DP=588;FS=3.131;HRun=0;HaplotypeScore=158.0953;InbreedingCoeff=0.9920;MQ=57.61;MQ0=9;MQRankSum=4.362;QD=32.08;ReadPosRankSum=3.850;VQSLOD=4.0495;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:79.31:0,79,1099	1/1:0,10:10:17.16:256,17,0	0/0:17,0:13:18.16:0,18,244	0/0:15,0:9:23.98:0,24,284	0/0:20,0:20:54.28:0,54,678	0/0:17,0:17:48.01:0,48,665	0/0:20,0:20:56.96:0,57,642	0/0:23,0:23:69.12:0,69,852	0/0:24,0:24:72.05:0,72,961	0/0:22,0:22:56.78:0,57,457	0/0:13,0:13:30.13:0,30,215	0/0:22,0:22:46.76:0,47,346	0/0:18,0:18:44.60:0,45,302	0/0:20,0:20:55.82:0,56,398	1/1:1,31:35:54.02:1153,54,0	0/0:33,0:33:86.35:0,86,651	1/1:1,21:22:28.15:881,28,0	0/0:24,0:24:59.39:0,59,425	0/0:17,0:15:38.45:0,38,516	0/0:23,0:23:66.07:0,66,855	0/0:22,0:22:56.96:0,57,791	0/0:26,0:26:61.01:0,61,450	0/0:26,0:26:78.15:0,78,1127	0/0:21,0:21:59.96:0,60,783	0/0:13,0:13:34.59:0,35,272	0/0:20,0:20:60:0,60,808	0/0:25,0:24:71.74:0,72,1006	0/0:10,0:9:27.09:0,27,459
chr10	90707312	.	G	GT	5852.92	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=8.012;DP=601;FS=2.039;HRun=8;HaplotypeScore=120.3143;InbreedingCoeff=0.9992;MQ=65.78;MQ0=8;MQRankSum=-11.042;QD=29.41;ReadPosRankSum=0.997;VQSLOD=3.2187;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:71.99:0,72,651	0/0:12,0:12:26.99:0,27,240	0/0:18,1:15:32.25:0,32,344	0/0:15,1:10:23.98:0,24,211	0/0:24,0:24:62.91:0,63,560	0/0:17,0:17:45.02:0,45,412	0/0:21,0:21:57.01:0,57,516	0/0:25,0:25:56.99:0,57,509	0/0:22,0:22:60.03:0,60,549	1/1:14,12:27:44.76:701,45,0	1/1:5,7:12:33.09:363,33,0	1/1:9,10:19:51.13:553,51,0	1/1:10,9:19:53.47:549,53,0	1/1:11,11:22:65.52:686,66,0	0/0:36,0:36:56.98:0,57,509	1/1:14,16:30:90.22:977,90,0	0/0:19,0:19:41.97:0,42,372	1/1:7,16:24:59.83:646,60,0	0/0:18,0:16:36:0,36,327	0/0:23,0:23:63.03:0,63,572	0/0:19,0:19:45.02:0,45,412	1/1:11,20:31:88.33:925,88,0	0/0:29,0:29:81.03:0,81,738	0/0:19,0:19:54:0,54,484	1/1:9,6:15:42.10:454,42,0	0/0:20,0:20:54:0,54,486	0/0:24,0:23:47.98:0,48,434	0/0:9,0:9:27.01:0,27,247
chr10	90710284	.	TACAC	T	3128.90	PASS	AB=0.751;AC=29;AF=0.537;AN=54;BaseQRankSum=0.834;DP=613;FS=10.389;HRun=0;HaplotypeScore=113.5014;InbreedingCoeff=0.5519;MQ=57.36;MQ0=19;MQRankSum=-2.432;QD=10.13;ReadPosRankSum=2.247;VQSLOD=1.7863;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:36.58:0,37,697	1/1:8,0:10:6.01:55,6,0	./.	0/0:43,0:14:9.89:0,10,96	0/0:16,0:17:29.84:0,30,610	0/1:13,0:18:25.44:36,0,25	0/1:18,1:25:41.48:41,0,122	0/0:25,0:24:11.93:0,12,119	0/0:13,0:20:22.47:0,22,138	1/1:9,12:21:21.05:307,21,0	1/1:17,9:26:18.06:280,18,0	1/1:7,9:16:12.04:189,12,0	1/1:6,7:15:27.07:369,27,0	1/1:5,8:13:18.06:283,18,0	1/1:8,1:22:27.04:270,27,0	1/1:6,14:20:33.58:501,34,0	1/1:13,0:23:11.80:111,12,0	0/1:10,8:18:15.14:199,0,15	1/1:9,2:9:5.61:57,6,0	0/0:14,0:18:10.45:0,10,44	0/0:32,0:44:23.94:0,24,139	1/1:7,8:15:18.06:280,18,0	0/0:5,0:13:16.47:0,16,73	0/0:19,0:36:30.18:0,30,146	1/1:7,9:17:11.57:299,12,0	0/1:12,0:16:27.46:27,0,78	0/1:12,1:20:24.69:25,0,117	0/0:4,0:8:8.23:0,8,37
chr10	90710447	.	G	GA	9886.29	PASS	AB=0.577;AC=49;AF=0.875;AN=56;BaseQRankSum=-6.616;DP=498;FS=2.115;HRun=9;HaplotypeScore=47.8100;InbreedingCoeff=0.7871;MQ=65.72;MQ0=5;MQRankSum=-1.478;QD=22.32;ReadPosRankSum=1.068;VQSLOD=5.6162;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:74.97:0,75,651	1/1:4,9:13:15.04:166,15,0	0/0:13,0:7:8.12:0,8,96	0/0:14,0:10:11.01:0,11,155	1/1:4,23:27:69.14:740,69,0	1/1:2,14:16:30.08:332,30,0	1/1:2,17:19:31.90:450,32,0	1/1:4,18:21:54.12:582,54,0	1/1:6,11:16:24.06:266,24,0	1/1:1,19:20:57.15:630,57,0	1/1:8,16:24:48.13:524,48,0	1/1:4,11:14:20.75:232,21,0	1/1:4,9:11:27.07:299,27,0	1/1:0,10:10:24.06:265,24,0	1/1:2,16:18:36.10:398,36,0	1/1:2,15:17:33.97:367,34,0	1/1:3,25:26:51.14:564,51,0	1/1:4,17:21:42.11:465,42,0	1/1:5,15:18:45.08:483,45,0	1/1:7,20:27:54.15:594,54,0	1/1:6,5:11:22.85:227,23,0	1/1:2,12:13:27.03:283,27,0	1/1:3,9:12:18.05:199,18,0	1/1:4,15:19:38.45:387,38,0	0/1:4,11:14:21.89:235,0,22	1/1:1,20:22:59.97:634,60,0	1/1:2,13:14:30.08:332,30,0	1/1:1,7:7:21.06:232,21,0
chr10	90711086	.	T	TA	1291.02	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.608;DP=375;FS=7.079;HRun=0;HaplotypeScore=48.4404;InbreedingCoeff=0.7419;MQ=69.03;MQ0=1;MQRankSum=1.915;QD=25.31;ReadPosRankSum=1.825;VQSLOD=4.5038;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.20:0,60,835	1/1:0,9:9:24.07:270,24,0	0/0:14,0:10:22.31:0,22,162	0/0:12,0:6:0.95:0,1,67	0/0:33,0:33:99:0,99,1320	0/0:18,0:17:54.16:0,54,711	0/0:8,0:8:24.05:0,24,300	0/0:22,0:22:66.04:0,66,871	0/0:13,0:13:36.12:0,36,502	0/0:5,0:5:11.13:0,11,104	0/0:13,0:13:21.47:0,21,126	0/0:6,0:6:2.25:0,2,61	0/0:4,0:4:10.07:0,10,61	0/0:3,0:3:5.85:0,6,34	1/1:1,10:11:21.06:238,21,0	0/0:3,0:3:8.75:0,9,50	1/1:2,29:31:80.46:922,80,0	0/0:16,0:16:35.37:0,35,169	0/0:20,0:20:60.16:0,60,810	0/0:12,0:12:36.12:0,36,502	0/0:6,0:6:18.06:0,18,251	0/0:1,0:1:2.92:0,3,17	0/0:10,0:10:30.09:0,30,402	0/0:5,0:5:15.05:0,15,209	0/0:12,0:12:23.10:0,23,160	0/0:22,0:22:66.22:0,66,916	0/0:21,0:21:63.21:0,63,869	0/0:24,0:24:72.22:0,72,987
chr10	90711087	.	T	TA	3105.51	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=2.742;DP=374;FS=17.254;HRun=7;HaplotypeScore=41.5317;InbreedingCoeff=0.8900;MQ=69.10;MQ0=1;MQRankSum=0.162;QD=27.48;ReadPosRankSum=2.144;VQSLOD=2.1733;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.08:0,63,599	1/1:9,0:9:24.07:284,24,0	0/0:12,0:9:7.29:0,7,54	0/0:12,0:6:1.86:0,2,5	0/0:33,0:33:90.12:0,90,857	0/0:18,0:17:45.05:0,45,423	0/0:7,0:7:21.01:0,21,195	0/0:23,0:23:41.96:0,42,402	0/0:13,0:13:39.05:0,39,370	1/1:2,3:5:9.03:108,9,0	1/1:1,12:13:36.11:430,36,0	1/1:1,5:6:15.05:179,15,0	1/1:1,2:3:8.51:81,9,0	1/1:0,3:3:6.02:72,6,0	1/1:11,0:11:24.06:273,24,0	1/1:0,3:3:9.03:108,9,0	1/1:31,0:31:81.25:959,81,0	1/1:0,16:16:39.12:467,39,0	0/0:21,0:21:51.07:0,51,492	0/0:12,0:12:33.05:0,33,318	0/0:6,0:6:15.02:0,15,145	1/1:0,1:1:3.01:36,3,0	0/0:10,0:10:30.03:0,30,283	0/0:5,0:5:12.02:0,12,116	1/1:2,10:12:27.08:322,27,0	0/0:22,0:22:63.10:0,63,608	0/0:21,0:21:60.09:0,60,578	0/0:24,0:24:72.01:0,72,681
chr10	90711425	.	TGG	T	7702.35	PASS	AB=0.900;AC=19;AF=0.339;AN=56;BaseQRankSum=14.728;DP=650;FS=9.212;HRun=2;HaplotypeScore=78.8984;InbreedingCoeff=0.9176;MQ=96.31;MQ0=0;MQRankSum=-3.307;QD=40.75;ReadPosRankSum=5.095;VQSLOD=4.0196;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,2451	0/0:12,0:12:36.12:0,36,731	0/0:29,0:29:81.28:0,81,1645	0/0:34,0:34:87.30:0,87,1714	0/0:23,0:23:69.24:0,69,1402	0/0:22,0:22:66.23:0,66,1328	0/0:21,0:21:63.22:0,63,1260	0/0:36,0:36:99:0,108,2156	0/0:21,0:21:63.22:0,63,1278	1/1:0,22:22:63.21:996,63,0	1/1:0,17:17:48.16:783,48,0	1/1:0,16:16:42.14:685,42,0	1/1:0,16:16:45.15:734,45,0	1/1:0,17:17:51.17:832,51,0	0/0:28,0:28:84.29:0,84,1697	1/1:0,27:27:72.20:1146,72,0	0/0:33,0:33:96.33:0,96,1936	1/1:0,18:18:51.17:832,51,0	0/0:24,0:24:72.24:0,72,1429	0/0:5,0:5:15.05:0,15,305	0/0:46,0:46:99:0,138,2805	1/1:1,13:14:36.12:573,36,0	0/0:8,0:8:24.08:0,24,487	0/0:25,0:25:72.25:0,72,1448	1/1:0,24:24:66.23:1076,66,0	0/1:16,2:18:43.76:44,0,852	0/0:22,0:22:63.22:0,63,1280	0/0:31,0:31:93.32:0,93,1853
chr10	90712693	.	A	ATGTG	2076.06	PASS	AB=0.849;AC=30;AF=0.600;AN=50;BaseQRankSum=-5.358;DP=542;FS=3.252;HRun=0;HaplotypeScore=100.8853;InbreedingCoeff=-0.0597;MQ=43.46;MQ0=85;MQRankSum=-0.504;QD=5.93;ReadPosRankSum=-2.587;VQSLOD=1.6074;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:29:21:0,21,273	1/1:6,0:10:2.99:24,3,0	./.	./.	1/1:6,8:14:2.83:72,3,0	1/1:4,6:9:3.01:73,3,0	./.	1/1:16,0:8:11.25:200,11,0	1/1:5,12:17:9.01:170,9,0	0/1:29,0:26:11.54:12,0,309	0/0:12,0:10:3.01:0,3,30	0/1:20,0:20:36.90:37,0,160	0/1:14,0:13:6.97:7,0,137	0/1:21,0:20:51.83:52,0,57	0/1:9,0:19:21.47:75,0,21	0/0:16,0:15:14.84:0,15,153	0/1:14,0:31:99:193,0,126	0/1:29,0:29:27.79:28,0,243	0/1:7,6:11:22.17:308,0,22	1/1:6,4:10:3.11:73,3,0	0/0:17,30:38:3.01:0,3,40	0/0:17,0:14:6.49:0,6,69	1/1:4,10:16:6.02:146,6,0	1/1:5,8:11:3.01:73,3,0	0/1:15,0:13:15:15,0,64	0/1:5,11:14:3.62:521,0,4	1/1:5,7:9:3.01:73,3,0	1/1:3,4:6:3.01:73,3,0
chr10	90713703	.	AC	A	1766.34	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.617;DP=533;FS=0.615;HRun=2;HaplotypeScore=61.0065;InbreedingCoeff=0.9641;MQ=84.71;MQ0=0;MQRankSum=-0.873;QD=33.97;ReadPosRankSum=2.049;VQSLOD=3.8951;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1642	1/1:0,10:10:30.10:390,30,0	0/0:18,0:18:54.13:0,54,757	0/0:18,0:18:51.17:0,51,749	0/0:19,0:19:57.19:0,57,854	0/0:18,0:18:54.18:0,54,809	0/0:18,0:18:54.18:0,54,810	0/0:29,0:29:87.28:0,87,1266	0/0:14,1:15:6.19:0,6,588	0/0:15,0:15:45.15:0,45,674	0/0:10,0:10:30.10:0,30,449	0/0:14,0:14:42.13:0,42,610	0/0:12,0:12:36.12:0,36,540	0/0:11,0:11:33.11:0,33,493	1/1:0,19:19:54.18:701,54,0	0/0:11,0:11:33.06:0,33,452	1/1:0,23:23:63.20:818,63,0	0/0:18,0:18:54.18:0,54,806	0/0:20,0:20:51.14:0,51,706	0/0:15,0:15:45.15:0,45,670	0/0:54,0:54:99:0,163,2403	0/0:13,0:13:33.03:0,33,466	0/0:15,0:15:39.13:0,39,584	0/0:24,0:24:72.24:0,72,1079	0/0:13,0:13:39.13:0,39,585	0/0:20,0:20:57.19:0,57,854	0/0:20,0:20:60.19:0,60,877	0/0:24,0:24:72.24:0,72,1077
chr10	90713783	.	GATAA	G	2518.93	PASS	AB=0.875;AC=39;AF=0.929;AN=42;BaseQRankSum=1.655;DP=286;FS=1.762;HRun=0;HaplotypeScore=55.1901;InbreedingCoeff=0.1980;MQ=65.28;MQ0=0;MQRankSum=-0.129;QD=12.35;ReadPosRankSum=1.112;VQSLOD=2.2673;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,5:13:15.05:231,15,0	1/1:1,1:2:3.01:46,3,0	./.	./.	1/1:16,3:19:9.03:138,9,0	1/1:8,9:17:24.08:369,24,0	./.	./.	1/1:4,1:5:3.01:46,3,0	1/1:6,1:7:3.01:44,3,0	./.	1/1:4,1:5:3.01:46,3,0	1/1:1,3:4:6.02:92,6,0	1/1:3,1:4:3.01:46,3,0	0/0:15,0:15:12.04:0,12,281	1/1:4,3:7:9.03:138,9,0	1/1:5,2:7:6.02:92,6,0	0/1:12,2:14:1.01:84,0,1	1/1:12,7:19:21.07:322,21,0	1/1:11,5:16:15.05:231,15,0	1/1:10,2:12:6.02:92,6,0	1/1:5,1:6:3.01:46,3,0	./.	./.	1/1:4,6:10:15.05:231,15,0	1/1:8,2:10:6.02:92,6,0	1/1:11,2:13:3.01:46,3,0	1/1:11,3:14:12.04:183,12,0
chr10	90714420	.	T	TGG	4120.94	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-6.908;DP=458;FS=1.456;HRun=6;HaplotypeScore=72.6561;InbreedingCoeff=0.9525;MQ=85.06;MQ0=0;MQRankSum=-1.554;QD=31.95;ReadPosRankSum=0.182;VQSLOD=3.4025;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:36.09:0,36,426	0/0:2,0:2:6.02:0,6,73	0/0:19,0:19:35.81:0,36,393	0/0:18,0:18:41.46:0,41,450	0/0:11,0:11:18.04:0,18,212	0/0:16,0:16:15.14:0,15,328	0/0:23,0:23:45.08:0,45,518	0/0:21,0:21:39.10:0,39,471	0/0:17,0:17:45.59:0,46,538	1/1:3,19:22:47.74:748,48,0	1/1:4,4:8:15.01:222,15,0	1/1:3,17:20:32.94:558,33,0	1/1:11,7:18:54.11:722,54,0	1/1:4,8:12:30.06:475,30,0	0/0:24,0:24:58.04:0,58,696	1/1:1,14:16:32.26:516,32,0	0/0:44,0:44:99:0,108,1300	1/1:4,14:18:33.11:558,33,0	0/0:13,0:13:23.14:0,23,344	0/0:10,0:10:12.03:0,12,146	0/0:16,0:16:35.99:0,36,395	1/1:2,4:6:12.04:203,12,0	0/0:8,0:8:14.07:0,14,151	0/0:26,0:26:78.23:0,78,937	1/1:2,7:9:8.95:118,9,0	0/0:19,0:19:42.10:0,42,491	0/0:21,0:21:63.17:0,63,742	0/0:7,0:7:15.04:0,15,182
chr10	90715058	.	CACA	C	454.14	PASS	AB=0.920;AC=15;AF=0.268;AN=56;BaseQRankSum=8.348;DP=596;FS=10.370;HRun=0;HaplotypeScore=134.7269;InbreedingCoeff=-0.3267;MQ=67.52;MQ0=10;MQRankSum=-1.202;QD=1.32;ReadPosRankSum=-1.733;VQSLOD=1.6612;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,102,1468	0/0:6,0:6:14.20:0,14,77	0/0:24,0:14:42.13:0,42,505	0/0:32,0:19:55.41:0,55,649	0/1:13,1:14:2.86:3,0,90	0/1:17,0:17:44.88:45,0,124	0/1:28,2:30:44.48:44,0,169	0/0:30,0:30:75.47:0,75,319	0/1:15,2:18:76.88:77,0,88	0/1:19,0:19:12.90:13,0,284	0/0:10,0:10:22.65:0,23,138	0/1:26,0:28:6.40:6,0,487	0/1:19,0:19:10.87:11,0,255	0/1:20,0:21:1.88:2,0,231	0/1:30,0:32:19.64:20,0,430	0/0:14,0:15:21.24:0,21,313	0/1:31,0:32:15.34:15,0,399	0/0:21,0:22:17.46:0,17,417	0/0:15,0:14:11.48:0,11,131	0/1:6,2:8:19.94:62,0,20	0/1:54,2:56:5.37:5,0,449	0/0:7,0:8:3.29:0,3,197	0/0:15,0:15:14.35:0,14,89	0/1:20,4:25:97.53:122,0,98	0/0:12,0:12:22.38:0,22,117	0/0:18,1:17:12.62:0,13,144	0/1:8,7:15:58.66:170,0,59	0/1:8,0:8:1.82:2,0,88
chr10	90716453	.	TA	T	1326.76	PASS	AB=1.000;AC=38;AF=0.704;AN=54;BaseQRankSum=5.069;DP=370;FS=13.615;HRun=7;HaplotypeScore=93.7419;InbreedingCoeff=0.2629;MQ=79.02;MQ0=0;MQRankSum=-3.181;QD=5.03;ReadPosRankSum=4.255;VQSLOD=-0.0211;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:94.07:0,94,1207	1/1:0,2:2:3:30,3,0	0/0:21,0:15:19.49:0,19,176	0/0:16,0:12:20.73:0,21,127	1/1:14,0:14:12.87:54,13,0	1/1:16,0:16:14.36:51,14,0	1/1:12,0:12:16.17:54,16,0	0/0:30,0:30:11.37:0,11,269	1/1:8,0:8:8.23:31,8,0	1/1:5,0:5:5.64:37,6,0	1/1:4,0:4:2.61:8,3,0	0/1:8,0:8:10.14:10,0,60	1/1:6,0:6:10.89:41,11,0	0/1:12,0:12:11.28:23,0,11	1/1:0,11:11:32.87:295,33,0	0/1:10,0:10:17.88:18,0,29	1/1:2,23:27:66.10:612,66,0	1/1:14,0:14:8.68:28,9,0	0/1:22,0:22:12.64:22,0,13	1/1:7,0:7:8.61:28,9,0	1/1:16,0:16:8.07:26,8,0	./.	1/1:4,0:4:3.26:11,3,0	0/1:14,0:14:1.03:20,0,1	0/1:8,0:8:4.12:4,0,18	0/1:14,0:14:23.96:24,0,27	0/1:19,0:19:1.42:50,0,1	1/1:11,0:11:5.40:16,5,0
chr10	90716460	.	AT	A	5172.57	PASS	AB=1.000;AC=45;AF=0.833;AN=54;BaseQRankSum=4.210;DP=370;FS=15.615;HRun=9;HaplotypeScore=82.4149;InbreedingCoeff=0.7366;MQ=83.16;MQ0=0;MQRankSum=-1.579;QD=17.90;ReadPosRankSum=2.916;VQSLOD=3.8822;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,1:36:74.88:0,75,1089	0/0:2,0:2:0.72:0,1,15	0/0:23,0:16:21.30:0,21,159	0/0:20,0:15:12.23:0,12,83	1/1:1,12:13:38.36:323,38,0	1/1:0,19:19:42.02:383,42,0	1/1:0,13:13:33.02:301,33,0	1/1:11,17:28:47.98:431,48,0	1/1:0,8:8:21.01:192,21,0	1/1:1,4:5:14.62:103,15,0	1/1:0,7:7:14.91:120,15,0	1/1:4,4:8:11.99:109,12,0	1/1:0,8:8:15.01:137,15,0	1/1:1,11:12:18:164,18,0	1/1:11,0:11:10.27:44,10,0	1/1:1,8:9:18.01:164,18,0	0/1:26,0:26:32.32:37,0,32	1/1:0,13:13:33.02:302,33,0	1/1:1,16:17:47.40:420,47,0	1/1:0,7:7:21.01:192,21,0	1/1:0,15:15:39.02:356,39,0	./.	1/1:0,4:4:8.90:82,9,0	1/1:0,13:13:30.02:274,30,0	1/1:1,6:7:15.01:137,15,0	1/1:2,11:13:33.01:300,33,0	1/1:1,20:21:44.82:410,45,0	1/1:0,12:12:21.01:192,21,0
chr10	90716569	.	A	ATATTTATT	2511.42	PASS	AB=0.929;AC=18;AF=0.360;AN=50;BaseQRankSum=-3.767;DP=297;FS=4.189;HRun=0;HaplotypeScore=66.8514;InbreedingCoeff=0.7041;MQ=61.45;MQ0=1;MQRankSum=-5.755;QD=40.51;ReadPosRankSum=-1.436;VQSLOD=2.9382;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:32:60.18:0,60,1396	0/0:5,0:5:9.03:0,9,183	./.	0/1:3,0:3:0:0,0,0	0/0:21,0:21:24.08:0,24,592	0/0:16,0:16:33.11:0,33,835	./.	0/0:32,0:32:48.15:0,48,1013	0/0:7,0:7:12.04:0,12,303	1/1:2,5:7:15.05:519,15,0	1/1:3,6:9:8.99:268,9,0	1/1:3,0:3:6.02:240,6,0	1/1:1,3:5:6.02:228,6,0	1/1:4,1:5:12.04:374,12,0	0/0:7,0:7:18.06:0,18,458	1/1:2,3:5:9.03:344,9,0	0/0:23,0:23:51.18:0,51,1277	1/1:14,1:15:9.03:356,9,0	0/0:22,0:20:18.05:0,18,409	0/0:6,0:6:9.03:0,9,227	0/0:7,0:7:6.02:0,6,149	./.	0/0:6,0:6:6.02:0,6,150	0/0:1,0:1:3.01:0,3,73	1/1:2,2:4:6.02:248,6,0	0/1:5,1:6:99:108,0,289	0/0:18,0:17:24.05:0,24,501	0/0:20,0:20:48.08:0,48,1035
chr10	90716571	.	A	ATTTATTTA	2389.35	PASS	AB=1.000;AC=18;AF=0.360;AN=50;BaseQRankSum=-4.115;DP=296;FS=2.980;HRun=0;HaplotypeScore=66.3533;InbreedingCoeff=0.6915;MQ=59.87;MQ0=1;MQRankSum=-5.433;QD=37.93;ReadPosRankSum=-0.160;VQSLOD=3.2498;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:60.18:0,60,1396	0/0:5,0:5:9.03:0,9,183	./.	0/1:2,0:2:0:0,0,0	0/0:20,0:20:24.08:0,24,592	0/0:15,0:15:33.11:0,33,835	./.	0/0:37,0:37:48.15:0,48,1013	0/0:5,0:5:12.04:0,12,303	1/1:7,0:7:15.05:519,15,0	1/1:9,0:9:8.99:268,9,0	1/1:4,0:4:3.01:116,3,0	1/1:6,0:6:6.02:228,6,0	1/1:5,0:5:12.04:374,12,0	0/0:7,0:7:18.06:0,18,458	1/1:5,0:5:9.03:344,9,0	0/0:23,0:23:51.18:0,51,1277	1/1:10,4:15:9.03:356,9,0	0/0:21,0:19:18.05:0,18,409	0/0:5,0:5:9.03:0,9,227	0/0:7,0:7:6.02:0,6,149	./.	0/0:5,0:5:6.02:0,6,150	0/0:1,0:1:3.01:0,3,73	1/1:4,0:4:6.02:248,6,0	0/1:6,0:6:99:108,0,289	0/0:16,0:15:24.05:0,24,501	0/0:22,0:22:48.08:0,48,1035
chr10	90717145	.	A	ATGGG	20986.99	PASS	AB=0.560;AC=49;AF=0.875;AN=56;BaseQRankSum=-8.276;DP=711;FS=1.193;HRun=0;HaplotypeScore=102.9333;InbreedingCoeff=0.7905;MQ=49.25;MQ0=23;MQRankSum=2.906;QD=36.00;ReadPosRankSum=4.935;VQSLOD=5.0230;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,111,1656	1/1:4,0:4:6:82,6,0	0/0:39,0:11:14.46:0,14,221	0/0:41,0:11:23.96:0,24,344	1/1:3,17:20:26.25:485,26,0	1/1:1,13:14:21.54:565,22,0	1/1:3,26:29:36.12:961,36,0	1/1:5,18:21:33.04:679,33,0	1/1:2,26:27:29.81:803,30,0	1/1:4,26:30:74.27:1479,74,0	1/1:2,8:10:12.04:308,12,0	1/1:2,21:25:27.09:710,27,0	1/1:1,18:19:42.14:1122,42,0	1/1:1,19:20:27.09:724,27,0	1/1:2,20:22:36.59:955,37,0	1/1:0,23:25:39.13:999,39,0	1/1:0,28:28:45.63:1204,46,0	0/1:6,22:27:5.79:1067,0,6	1/1:7,14:17:39.04:620,39,0	1/1:3,17:20:36.12:954,36,0	1/1:6,70:76:92.53:2369,93,0	1/1:2,15:17:27.09:689,27,0	1/1:1,11:12:7.59:239,8,0	1/1:8,36:43:15.78:1571,16,0	1/1:0,10:10:14.94:336,15,0	1/1:2,19:22:33.89:852,34,0	1/1:1,12:13:23.82:568,24,0	1/1:1,11:12:24.08:646,24,0
chr10	90717146	.	T	TGGGG	14654.66	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=3.814;DP=684;FS=0.000;HRun=2;HaplotypeScore=117.8739;InbreedingCoeff=0.3809;MQ=47.38;MQ0=23;MQRankSum=0.843;QD=26.31;ReadPosRankSum=9.878;VQSLOD=0.8601;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,111,1892	1/1:3,1:5:2.47:81,2,0	0/0:41,0:11:24.02:0,24,342	0/0:39,0:10:27.08:0,27,438	1/1:19,1:20:15.80:299,16,0	1/1:14,0:14:6.05:393,6,0	1/1:28,0:28:35.76:715,36,0	0/1:21,0:19:57.38:277,0,57	1/1:23,0:21:30.04:605,30,0	1/1:27,1:27:49.18:905,49,0	1/1:11,1:12:12.04:242,12,0	1/1:21,1:22:26.82:544,27,0	1/1:19,1:20:42.14:857,42,0	1/1:18,0:18:6.11:501,6,0	1/1:19,2:20:35.96:752,36,0	1/1:22,0:22:39.13:713,39,0	1/1:28,0:28:45.14:889,45,0	0/1:28,0:27:58.37:793,0,58	1/1:21,0:17:25.44:315,25,0	1/1:18,0:18:36.12:673,36,0	1/1:82,0:76:88.90:1715,89,0	1/1:16,0:16:27.09:487,27,0	0/1:12,0:12:13.64:167,0,14	0/1:43,0:41:7.88:1106,0,8	1/1:9,0:9:13.29:248,13,0	0/1:21,0:20:41.17:479,0,41	1/1:13,1:14:17.62:424,18,0	1/1:11,0:11:24.08:475,24,0
chr10	90718081	.	C	CTGTG	3493.24	PASS	AB=0.727;AC=47;AF=0.904;AN=52;BaseQRankSum=-0.149;DP=588;FS=0.000;HRun=0;HaplotypeScore=141.2981;InbreedingCoeff=0.4495;MQ=64.03;MQ0=20;MQRankSum=-0.569;QD=7.58;ReadPosRankSum=1.051;VQSLOD=2.7776;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:21.03:0,21,188	0/0:7,0:7:6.02:0,6,89	./.	./.	1/1:14,0:14:9.02:115,9,0	1/1:26,0:23:11.54:131,12,0	1/1:30,0:27:6:83,6,0	1/1:29,0:25:6:58,6,0	1/1:10,5:15:3.01:52,3,0	1/1:17,8:25:42.06:604,42,0	1/1:15,0:15:2.86:25,3,0	1/1:13,0:13:11.98:129,12,0	1/1:16,0:16:14.88:149,15,0	1/1:10,0:10:8.97:94,9,0	1/1:13,0:13:3.01:41,3,0	1/1:18,0:18:2.76:46,3,0	1/1:21,0:21:17.99:220,18,0	1/1:21,0:20:15.42:125,15,0	1/1:13,0:10:9.50:148,9,0	1/1:15,0:15:6:54,6,0	1/1:46,0:44:30.05:452,30,0	0/1:10,0:15:0:0,0,0	1/1:18,0:18:8.48:105,8,0	1/1:23,0:22:23.94:286,24,0	1/1:9,0:16:1.52:5,2,0	1/1:27,0:27:34.28:449,34,0	1/1:17,0:17:10.90:97,11,0	1/1:4,0:3:3:25,3,0
chr10	90718852	.	TCTC	T	383.17	PASS	AB=0.960;AC=25;AF=0.446;AN=56;BaseQRankSum=5.890;DP=427;FS=0.565;HRun=0;HaplotypeScore=79.4931;InbreedingCoeff=0.0570;MQ=69.38;MQ0=7;MQRankSum=-2.688;QD=1.39;ReadPosRankSum=1.595;VQSLOD=1.5131;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:56.47:0,56,917	0/0:7,0:6:14.37:0,14,172	0/0:33,0:15:40.55:0,41,514	0/0:25,0:7:18.03:0,18,273	0/1:20,4:24:25.08:25,0,27	1/1:9,0:8:10.26:40,10,0	0/1:9,0:9:9.17:9,0,13	0/1:21,0:20:5.86:6,0,32	0/1:11,0:11:8.77:9,0,47	0/1:21,1:22:2:9,0,2	0/0:13,0:13:3.06:0,3,69	0/1:10,1:11:5.76:6,0,10	0/1:5,1:6:13.57:14,0,59	1/1:7,0:7:4.12:41,4,0	0/0:12,0:11:29.93:0,30,441	0/1:17,1:18:45.83:49,0,46	0/0:20,0:20:49.39:0,49,753	0/1:16,1:17:4.13:4,0,54	0/1:17,0:17:29.13:63,0,29	0/1:12,0:12:12.68:13,0,14	1/1:10,0:10:8.10:22,8,0	1/1:12,0:12:4.48:16,4,0	0/0:12,0:12:0.72:0,1,39	1/1:23,0:23:18.80:97,19,0	0/1:10,0:10:9.97:10,0,16	0/1:23,0:23:3.97:65,0,4	1/1:14,0:14:15.44:54,15,0	0/0:3,0:3:1.67:0,2,21
chr10	90718853	.	CTCT	C	4966.61	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-3.013;DP=425;FS=2.739;HRun=0;HaplotypeScore=63.7631;InbreedingCoeff=0.8663;MQ=68.82;MQ0=7;MQRankSum=-0.009;QD=16.45;ReadPosRankSum=1.469;VQSLOD=4.6091;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:56.02:0,56,617	0/0:7,0:6:5.34:0,5,67	0/0:33,0:15:15.17:0,15,241	0/0:25,0:7:14.95:0,15,147	1/1:21,0:23:30.22:357,30,0	1/1:7,1:8:23.99:219,24,0	1/1:10,0:10:23.44:194,23,0	1/1:21,1:22:40.46:332,40,0	1/1:10,0:10:8.03:188,8,0	1/1:22,0:24:27.53:323,28,0	1/1:1,10:11:14.73:98,15,0	1/1:11,0:11:19.84:169,20,0	1/1:4,0:4:8.96:73,9,0	1/1:8,0:8:8.47:85,8,0	0/0:12,0:11:24.71:0,25,219	1/1:14,0:16:25.37:287,25,0	0/0:20,0:20:34.65:0,35,377	1/1:17,0:17:17.04:244,17,0	1/1:17,0:18:14.55:285,15,0	1/1:11,0:12:29.77:248,30,0	1/1:12,0:12:19:171,19,0	1/1:11,0:11:26.51:224,27,0	1/1:1,9:11:5.18:38,5,0	1/1:21,0:23:50.39:456,50,0	1/1:7,2:9:9.99:106,10,0	1/1:20,0:22:51.04:489,51,0	1/1:15,0:15:35.75:330,36,0	1/1:3,0:3:5.99:49,6,0
chr10	90718854	.	TC	T	5165.12	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-2.393;DP=425;FS=0.593;HRun=1;HaplotypeScore=53.2912;InbreedingCoeff=0.8615;MQ=66.40;MQ0=7;MQRankSum=-1.217;QD=16.88;ReadPosRankSum=-3.004;VQSLOD=3.9720;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:54.70:0,55,421	0/0:6,0:5:4.81:0,5,65	0/0:33,0:15:3.63:0,4,187	0/0:23,0:5:14.96:0,15,134	1/1:24,0:24:42.16:373,42,0	1/1:9,0:8:23.97:206,24,0	1/1:9,0:9:24.39:197,24,0	1/1:23,0:22:41.34:353,41,0	1/1:12,0:11:8.67:189,9,0	1/1:6,18:24:45.97:365,46,0	1/1:11,0:11:14.82:99,15,0	1/1:12,0:12:25.81:213,26,0	1/1:3,0:3:8.96:73,9,0	1/1:10,0:10:15.86:129,16,0	0/0:12,0:11:29.50:0,29,223	1/1:15,0:15:32.23:268,32,0	0/0:18,0:18:48.24:0,48,375	1/1:15,2:17:18.96:296,19,0	1/1:19,0:19:32.27:316,32,0	1/1:12,0:12:30.41:250,30,0	1/1:12,0:12:21.91:177,22,0	1/1:12,0:12:27.02:244,27,0	1/1:10,0:10:6.84:42,7,0	1/1:23,0:23:50.56:431,51,0	1/1:9,0:9:13.84:114,14,0	1/1:22,0:22:51.35:465,51,0	1/1:15,1:16:35.84:317,36,0	1/1:2,0:2:5.99:49,6,0
chr10	90720662	.	T	TGAAATACATC	31203.72	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-1.331;DP=480;FS=1.265;HRun=0;HaplotypeScore=146.6229;InbreedingCoeff=0.9983;MQ=76.56;MQ0=0;MQRankSum=-14.464;QD=113.06;ReadPosRankSum=-4.017;VQSLOD=4.5245;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,113,3543	1/1:4,6:10:27.09:1408,27,0	0/0:18,0:18:27.90:0,28,1087	0/0:13,0:13:29.13:0,29,759	1/1:5,13:19:51.17:2396,51,0	1/1:4,10:14:33.11:1729,33,0	1/1:5,9:14:33.11:1565,33,0	1/1:35,6:40:99:4078,108,0	1/1:3,8:11:33.11:1605,33,0	0/0:23,0:23:69.21:0,69,1992	0/0:7,0:7:21.07:0,21,685	0/0:17,0:17:45.15:0,45,1397	0/0:9,0:9:27.09:0,27,881	0/0:15,0:15:42.14:0,42,1371	1/1:9,12:22:54.18:2539,54,0	0/0:16,0:16:45.15:0,45,1422	1/1:7,6:12:33.09:1357,33,0	0/0:10,0:10:27.09:0,27,826	1/1:10,11:24:63.16:2459,63,0	1/1:7,7:14:33.11:1534,33,0	1/1:10,4:14:24.07:1097,24,0	0/0:14,0:14:39.13:0,39,1257	1/1:9,9:18:39.13:1706,39,0	1/1:9,5:14:36.12:1819,36,0	0/0:17,0:17:48.16:0,48,1567	1/1:9,13:22:60.21:2685,60,0	1/1:7,8:15:42.14:1904,42,0	1/1:9,2:11:33.11:1323,33,0
chr10	90720709	.	CT	C	4436.07	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=8.706;DP=447;FS=5.851;HRun=9;HaplotypeScore=80.4888;InbreedingCoeff=0.9331;MQ=56.80;MQ0=1;MQRankSum=-2.949;QD=18.56;ReadPosRankSum=2.722;VQSLOD=5.1593;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,111,1281	1/1:2,9:11:15.01:137,15,0	0/0:9,0:6:15.04:0,15,173	0/0:16,0:14:0.64:0,1,243	1/1:7,19:26:42.01:384,42,0	1/1:3,6:9:18.01:165,18,0	1/1:1,12:13:7.51:249,8,0	1/1:6,12:18:19.23:306,19,0	1/1:2,4:6:12:110,12,0	0/0:25,0:25:61.41:0,61,680	0/0:12,0:12:30.08:0,30,338	0/0:16,0:16:30.08:0,30,336	0/0:10,0:10:18.05:0,18,208	0/0:14,1:16:11.48:0,11,367	1/1:4,13:17:36.01:328,36,0	0/0:14,0:14:30.09:0,30,346	1/1:0,19:18:39.02:357,39,0	0/0:10,0:10:24.54:0,25,278	1/1:9,3:12:11.98:110,12,0	1/1:3,9:12:28.82:250,29,0	1/1:0,14:14:30.01:274,30,0	0/0:14,0:14:36.10:0,36,406	1/1:3,18:21:44.88:412,45,0	1/1:0,15:15:30.01:273,30,0	0/0:19,0:18:42.12:0,42,474	1/1:4,16:20:47.93:424,48,0	1/1:1,11:11:30.02:275,30,0	1/1:0,14:14:42.02:384,42,0
chr10	90720861	.	A	AGC	10466.94	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-6.822;DP=289;FS=4.712;HRun=0;HaplotypeScore=32.4715;InbreedingCoeff=0.8341;MQ=67.48;MQ0=7;MQRankSum=-2.417;QD=45.51;ReadPosRankSum=2.120;VQSLOD=6.1690;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1526	1/1:1,4:6:12.04:223,12,0	0/0:11,0:9:24.08:0,24,346	0/0:13,0:8:24.06:0,24,332	1/1:3,12:13:30.10:558,30,0	1/1:0,7:7:21.07:392,21,0	1/1:1,16:15:42.14:784,42,0	1/1:2,5:5:15.05:273,15,0	1/1:0,2:2:6.02:112,6,0	1/1:2,9:11:27.09:503,27,0	1/1:1,4:5:12.04:221,12,0	1/1:0,11:11:27.09:502,27,0	1/1:0,12:12:36.12:670,36,0	1/1:1,14:15:39.13:727,39,0	1/1:0,5:5:15.05:281,15,0	1/1:0,6:6:18.06:337,18,0	1/1:0,14:13:36.12:672,36,0	1/1:0,7:7:21.07:393,21,0	1/1:2,7:9:23.95:407,24,0	1/1:1,6:6:9.03:167,9,0	1/1:1,16:20:45.15:841,45,0	1/1:0,7:7:21.07:387,21,0	1/1:0,7:7:21.07:391,21,0	1/1:0,16:15:30.10:560,30,0	1/1:1,4:4:9.03:168,9,0	1/1:0,9:9:27.09:505,27,0	1/1:0,7:7:18.06:336,18,0	1/1:1,1:2:3.01:56,3,0
chr10	90721150	.	C	CTTT	5990.03	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=3.249;DP=451;FS=5.224;HRun=12;HaplotypeScore=103.1585;InbreedingCoeff=0.9158;MQ=62.38;MQ0=9;MQRankSum=-10.450;QD=22.35;ReadPosRankSum=-5.190;VQSLOD=2.6681;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:36:67.31:0,67,727	1/1:5,0:6:9.01:113,9,0	0/0:8,0:9:4.83:0,5,67	0/1:12,0:10:1.32:1,0,97	1/1:14,8:23:50.40:697,50,0	1/1:10,6:16:35.10:442,35,0	1/1:13,3:17:34.84:357,35,0	1/1:18,3:20:36.08:382,36,0	1/1:7,2:11:23.72:314,24,0	0/0:22,0:21:31.66:0,32,489	0/0:11,0:11:27.06:0,27,293	0/0:15,0:15:35.88:0,36,385	0/0:21,0:21:41.47:0,41,469	0/0:21,0:21:47.94:0,48,527	1/1:7,4:12:30.13:373,30,0	0/0:10,0:10:27.05:0,27,293	1/1:21,6:25:41.85:516,42,0	0/0:13,0:13:36.09:0,36,402	1/1:14,3:19:39.91:522,40,0	1/1:12,3:16:41.90:485,42,0	1/1:5,1:6:11.95:133,12,0	0/0:10,0:9:27.06:0,27,292	1/1:9,3:11:19.36:257,19,0	1/1:15,2:18:18.39:208,18,0	0/0:13,0:13:32.44:0,32,368	1/1:19,3:26:64.95:712,65,0	1/1:11,2:12:31.96:380,32,0	1/1:5,1:7:8.97:98,9,0
chr10	90721168	.	C	CT	4038.22	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=0.703;DP=474;FS=11.030;HRun=7;HaplotypeScore=82.5083;InbreedingCoeff=0.8260;MQ=50.45;MQ0=14;MQRankSum=-8.928;QD=13.37;ReadPosRankSum=-4.882;VQSLOD=1.0940;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:55.41:0,55,701	1/1:2,3:5:0.89:3,1,0	1/1:4,0:3:1.82:5,2,0	0/1:8,0:6:1.66:2,0,17	1/1:11,16:27:29.95:305,30,0	1/1:7,12:17:27.08:326,27,0	1/1:9,9:17:21.06:254,21,0	1/1:15,12:26:39.09:456,39,0	1/1:8,5:12:20.56:217,21,0	0/0:23,0:22:41.64:0,42,402	0/0:9,0:9:24.04:0,24,232	0/0:13,0:12:21.03:0,21,202	0/0:19,0:18:51.07:0,51,486	0/0:20,0:20:51.07:0,51,492	1/1:7,8:15:23.09:256,23,0	0/0:10,0:10:30.05:0,30,290	1/1:15,17:29:39.12:468,39,0	0/0:14,0:14:36.04:0,36,340	1/1:14,3:17:9.03:109,9,0	1/1:10,6:15:12.04:142,12,0	1/1:6,1:6:6.48:61,6,0	0/0:12,0:11:27.02:0,27,252	1/1:4,7:10:23.28:256,23,0	1/1:6,11:17:2.04:280,2,0	0/0:19,0:19:50.66:0,51,487	1/1:17,15:32:51.60:592,52,0	1/1:12,10:18:24.06:271,24,0	1/1:8,4:11:3.01:36,3,0
chr10	90724299	.	C	CTCCTAT	21694.01	PASS	AB=0.556;AC=49;AF=0.875;AN=56;BaseQRankSum=-8.129;DP=546;FS=52.431;HRun=0;HaplotypeScore=89.0755;InbreedingCoeff=0.7165;MQ=54.96;MQ0=6;MQRankSum=-9.497;QD=47.47;ReadPosRankSum=3.368;VQSLOD=2.7259;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,2138	1/1:0,9:10:15.52:528,16,0	0/0:24,0:19:23.90:0,24,546	0/0:28,0:20:49.94:0,50,901	1/1:1,19:23:54.01:1223,54,0	1/1:3,14:18:18.06:623,18,0	1/1:0,4:8:6.02:151,6,0	1/1:6,15:24:57.17:1102,57,0	1/1:2,26:30:51.18:1724,51,0	1/1:2,14:17:42.01:1243,42,0	1/1:0,14:17:23.97:632,24,0	1/1:1,15:15:24.08:828,24,0	1/1:0,12:13:15.05:517,15,0	1/1:0,14:14:21.07:731,21,0	1/1:3,20:24:36.12:1241,36,0	1/1:1,18:19:42.14:1467,42,0	1/1:2,15:18:12.04:422,12,0	0/1:3,12:15:12.05:514,0,12	1/1:10,15:23:60.12:1431,60,0	1/1:2,15:18:42.14:1201,42,0	1/1:1,14:19:6.02:125,6,0	1/1:0,18:19:33.11:1036,33,0	1/1:1,18:19:24.08:832,24,0	1/1:2,15:21:10.53:817,11,0	1/1:1,13:14:18.06:584,18,0	1/1:0,14:16:48.16:1395,48,0	1/1:1,20:22:36.12:1250,36,0	1/1:2,9:11:3.01:76,3,0
chr10	90726640	.	T	TG	1029.74	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-3.803;DP=452;FS=20.919;HRun=0;HaplotypeScore=80.9112;InbreedingCoeff=0.1480;MQ=52.26;MQ0=40;MQRankSum=3.681;QD=5.92;ReadPosRankSum=0.773;VQSLOD=1.6957;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:35:84.71:0,85,678	0/0:8,0:6:5.21:0,5,29	0/0:42,0:13:10.50:0,11,122	0/1:25,0:10:8.79:9,0,45	0/1:21,0:19:10.15:199,0,10	1/1:4,0:3:5.88:43,6,0	0/1:7,0:5:19.82:46,0,20	0/1:32,0:26:99:179,0,119	1/1:10,0:6:17.75:121,18,0	0/0:20,0:19:53.29:0,53,390	0/0:18,0:17:40.93:0,41,282	0/0:16,0:15:20.40:0,20,148	0/0:14,0:11:26.60:0,27,179	0/0:14,0:13:20.03:0,20,138	0/0:12,0:11:28.84:0,29,204	0/0:11,0:10:23.09:0,23,177	0/0:27,0:19:50.52:0,51,356	0/0:19,0:16:17.89:0,18,135	0/1:18,0:14:40.55:162,0,41	1/1:8,0:7:0.82:80,1,0	1/1:3,0:3:8.97:72,9,0	0/0:4,0:3:3.85:0,4,22	0/1:7,0:7:36.83:54,0,37	0/1:5,0:2:7.07:17,0,7	0/0:13,0:13:11.06:0,11,67	0/1:20,0:17:42.87:156,0,43	0/0:11,10:19:22.63:0,23,134	0/1:14,0:10:23.88:59,0,24
chr10	90726913	.	GTT	G	5313.19	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=3.663;DP=450;FS=1.709;HRun=10;HaplotypeScore=65.5836;InbreedingCoeff=0.9266;MQ=73.29;MQ0=2;MQRankSum=-1.401;QD=24.83;ReadPosRankSum=0.332;VQSLOD=4.5471;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:90.30:0,90,1411	0/0:0,0:7:17.47:0,17,60	0/1:20,0:14:0.23:0,0,168	0/0:22,0:17:21.06:0,21,263	1/1:2,9:11:23.98:252,24,0	1/1:2,15:17:45.11:500,45,0	1/1:2,21:23:57.15:635,57,0	1/1:5,25:29:71.30:761,71,0	1/1:2,10:12:30.08:331,30,0	0/0:16,0:16:45.15:0,45,713	0/0:14,0:14:36.11:0,36,548	0/0:10,0:10:24.07:0,24,359	0/0:16,0:16:48.16:0,48,761	0/0:19,0:19:54.18:0,54,857	0/0:0,0:17:39.93:0,40,137	0/0:11,0:13:35.60:0,36,500	0/0:3,0:30:68.34:0,68,259	0/0:21,0:21:60.18:0,60,926	1/1:3,15:18:45.03:469,45,0	1/1:1,7:9:14.97:225,15,0	1/1:1,13:14:36.09:401,36,0	0/0:1,0:1:3.01:0,3,48	1/1:0,3:3:9.02:100,9,0	1/1:4,11:15:33.07:368,33,0	0/0:13,0:13:33.11:0,33,524	1/1:1,12:13:36.09:401,36,0	1/1:0,13:13:33.09:366,33,0	1/1:0,15:15:45.12:502,45,0
chr10	90727116	.	CTT	C	2051.47	PASS	AB=0.579;AC=33;AF=0.589;AN=56;BaseQRankSum=3.264;DP=321;FS=7.073;HRun=16;HaplotypeScore=56.3616;InbreedingCoeff=0.7412;MQ=67.72;MQ0=5;MQRankSum=-4.856;QD=10.21;ReadPosRankSum=3.540;VQSLOD=1.8521;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:47.88:0,48,541	1/1:3,3:6:11.69:87,12,0	0/0:14,0:8:5.97:0,6,47	0/0:12,0:8:3.72:0,4,28	1/1:9,3:13:8.46:99,8,0	1/1:7,6:15:30.97:237,31,0	1/1:6,6:12:17.85:149,18,0	1/1:21,9:31:44.07:360,44,0	1/1:7,2:8:11.73:93,12,0	0/0:7,0:7:6.61:0,7,36	0/0:8,0:9:14.12:0,14,90	0/0:3,0:4:8.35:0,8,55	0/0:8,0:8:7.70:0,8,52	0/0:3,0:4:8.71:0,9,49	1/1:5,2:7:11.89:100,12,0	0/0:6,0:8:13.71:0,14,89	1/1:9,5:13:11.48:85,11,0	0/0:17,0:22:15.99:0,16,140	1/1:14,8:22:38.82:295,39,0	1/1:3,3:6:8.90:75,9,0	1/1:5,4:9:6.89:58,7,0	0/0:1,0:2:4.97:0,5,18	1/1:1,3:4:8.99:75,9,0	1/1:4,3:7:8.56:75,9,0	0/1:3,1:11:12.61:13,0,22	1/1:9,7:18:19.67:227,20,0	1/1:7,1:8:5.75:50,6,0	1/1:0,7:7:20.98:175,21,0
chr10	90727147	.	C	CT	2665.73	PASS	AB=1.000;AC=35;AF=0.648;AN=54;BaseQRankSum=6.981;DP=307;FS=5.085;HRun=6;HaplotypeScore=52.8145;InbreedingCoeff=0.8026;MQ=49.59;MQ0=12;MQRankSum=-5.993;QD=13.46;ReadPosRankSum=-2.279;VQSLOD=2.1213;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:32.78:0,33,335	1/1:2,6:7:12.04:151,12,0	1/1:9,0:3:2.84:14,3,0	0/1:7,0:2:0:0,0,0	1/1:2,11:13:27.09:337,27,0	1/1:2,8:10:9.03:113,9,0	1/1:9,8:14:26.99:286,27,0	1/1:13,13:26:36.07:432,36,0	1/1:4,3:6:6.01:64,6,0	0/0:7,0:6:18.04:0,18,183	0/0:10,0:10:24.05:0,24,244	0/0:7,0:7:18.04:0,18,183	0/0:4,0:4:9.02:0,9,92	0/0:7,0:7:9.02:0,9,92	1/1:3,2:5:9.02:100,9,0	0/0:8,0:8:17.94:0,18,183	1/1:4,14:17:27.07:322,27,0	0/0:28,0:25:56.68:0,57,537	1/1:12,5:13:18.05:214,18,0	1/1:2,4:5:3.01:38,3,0	1/1:3,3:5:8.97:81,9,0	./.	1/1:4,4:8:5.80:63,6,0	1/1:5,3:8:3:25,3,0	0/0:16,0:16:39.09:0,39,398	1/1:8,7:15:21.07:264,21,0	1/1:2,7:9:12.04:151,12,0	1/1:6,3:9:18.04:208,18,0
chr10	90727233	.	AGT	A	181.41	PASS	AB=0.840;AC=5;AF=0.093;AN=54;BaseQRankSum=4.295;DP=293;FS=1.401;HRun=0;HaplotypeScore=59.6211;InbreedingCoeff=-0.1265;MQ=64.33;MQ0=1;MQRankSum=-3.420;QD=3.36;ReadPosRankSum=2.526;VQSLOD=1.6896;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.17:0,57,1101	0/0:5,0:5:12.04:0,12,243	0/0:9,0:5:12:0,12,140	0/0:9,0:9:24.75:0,25,331	0/0:21,0:21:57.15:0,57,1034	0/0:16,0:16:42.13:0,42,792	0/0:6,0:6:18.03:0,18,291	0/0:29,0:28:81.16:0,81,1480	0/0:4,0:4:12.04:0,12,243	0/1:12,2:14:54.92:55,0,638	0/1:5,1:6:33.75:34,0,216	0/1:4,2:6:82.43:82,0,105	0/1:4,1:5:36.62:37,0,170	0/0:7,0:7:11.82:0,12,206	0/0:2,0:2:6.02:0,6,109	0/0:4,0:4:12.04:0,12,244	0/0:13,0:13:33.10:0,33,618	0/1:20,3:23:89.50:90,0,813	0/0:15,0:15:42.11:0,42,740	0/0:3,0:3:9.01:0,9,146	0/0:7,0:7:15.05:0,15,278	./.	0/0:3,0:3:6.02:0,6,122	0/0:3,0:3:6.02:0,6,121	0/0:21,0:21:63.17:0,63,1144	0/0:21,0:21:63.22:0,63,1266	0/0:11,0:11:26.88:0,27,477	0/0:9,0:9:27.05:0,27,473
chr10	90728112	.	C	CT	1593.49	PASS	AB=0.763;AC=27;AF=0.482;AN=56;BaseQRankSum=10.884;DP=426;FS=1.075;HRun=9;HaplotypeScore=67.2171;InbreedingCoeff=0.5376;MQ=75.72;MQ0=2;MQRankSum=-4.777;QD=6.99;ReadPosRankSum=-2.166;VQSLOD=1.0032;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:71.94:0,72,618	1/1:3,0:11:11.83:57,12,0	0/0:22,0:16:14.06:0,14,134	0/1:13,0:11:17.31:17,0,29	1/1:10,11:21:16.57:272,17,0	0/1:8,13:20:2.59:143,0,3	1/1:9,1:9:5.96:51,6,0	1/1:13,9:22:21.67:208,22,0	1/1:0,3:3:5.95:50,6,0	0/0:24,0:24:59.97:0,60,521	0/0:21,0:21:53.98:0,54,469	0/0:11,0:11:26.98:0,27,234	0/0:9,0:9:23.99:0,24,208	0/0:7,0:7:17.99:0,18,156	1/1:3,1:5:9.16:61,9,0	0/0:9,0:9:17.99:0,18,156	1/1:15,1:17:19.66:103,20,0	0/0:23,1:24:32.80:0,33,513	1/1:16,3:18:2.05:96,2,0	0/1:11,8:19:2.36:178,0,2	0/1:2,0:2:0:0,0,0	0/0:14,0:14:35.99:0,36,313	0/1:5,1:6:11.05:25,0,11	0/1:2,5:7:7.56:61,0,8	0/0:28,0:28:74.97:0,75,651	1/1:13,10:23:14.05:142,14,0	0/1:4,11:15:16.54:111,0,17	1/1:3,6:9:22.44:211,22,0
chr10	90728122	.	C	CT	1597.27	PASS	AB=1.000;AC=26;AF=0.481;AN=54;BaseQRankSum=10.729;DP=414;FS=1.070;HRun=9;HaplotypeScore=63.9900;InbreedingCoeff=0.4756;MQ=63.28;MQ0=4;MQRankSum=-3.893;QD=7.01;ReadPosRankSum=-2.596;VQSLOD=0.7888;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:66.15:0,66,701	1/1:10,0:10:11.23:54,11,0	0/0:18,0:9:6.74:0,7,134	0/1:13,0:10:16.26:16,0,45	1/1:22,0:22:12:259,12,0	0/1:19,0:18:3.44:142,0,3	1/1:3,5:6:2.36:31,2,0	1/1:21,0:19:25.39:232,25,0	1/1:5,0:5:5.95:50,6,0	0/0:20,0:20:54.13:0,54,580	0/0:22,0:22:60.08:0,60,630	0/0:11,0:11:24.06:0,24,257	0/0:9,0:9:27.03:0,27,278	0/0:7,0:7:21.05:0,21,225	1/1:6,0:5:8.60:58,9,0	0/0:7,0:7:21.05:0,21,225	1/1:19,0:16:22.33:114,22,0	0/0:23,0:23:66.11:0,66,696	1/1:17,0:16:2.92:96,3,0	0/1:18,0:18:21.23:175,0,21	./.	0/0:13,0:13:30.06:0,30,314	0/1:7,0:6:11.10:25,0,11	0/1:7,0:7:10.05:56,0,10	0/0:27,0:27:78.18:0,78,828	1/1:23,0:23:5.72:158,6,0	0/1:18,0:18:16.24:112,0,16	1/1:15,0:13:22.51:211,23,0
chr10	90728922	.	ATTC	A	4209.90	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=1.726;DP=375;FS=0.448;HRun=0;HaplotypeScore=64.0574;InbreedingCoeff=0.9024;MQ=72.50;MQ0=0;MQRankSum=-1.203;QD=19.31;ReadPosRankSum=0.815;VQSLOD=3.1188;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:56.58:0,57,721	1/1:1,5:6:9:117,9,0	0/1:10,0:9:0.83:1,0,122	0/0:10,0:10:20.20:0,20,157	1/1:7,3:10:23.31:306,23,0	1/1:14,1:15:37.23:366,37,0	1/1:7,8:15:6.02:86,6,0	1/1:16,1:17:30.79:274,31,0	1/1:9,2:11:25.26:254,25,0	0/0:21,0:21:56.55:0,57,766	0/0:18,0:18:41.93:0,42,469	0/0:4,0:4:12.01:0,12,181	0/0:9,0:8:12:0,12,127	0/0:6,0:6:15.01:0,15,172	1/1:12,0:11:24.02:216,24,0	0/0:11,0:11:24.04:0,24,348	1/1:19,2:21:41.60:410,42,0	0/0:19,0:19:28.58:0,29,480	1/1:5,6:11:24.05:314,24,0	1/1:8,0:8:17.96:167,18,0	1/1:5,12:17:9.03:134,9,0	0/0:7,0:7:12.03:0,12,216	1/1:7,0:7:17.72:127,18,0	1/1:7,2:9:12.03:169,12,0	0/0:25,0:25:69.12:0,69,998	1/1:18,2:20:14.69:491,15,0	1/1:13,1:13:29.99:325,30,0	1/1:13,2:15:40.86:453,41,0
chr10	90728925	.	CTTCT	C	2702.34	PASS	AB=0.901;AC=26;AF=0.464;AN=56;BaseQRankSum=3.666;DP=389;FS=1.957;HRun=0;HaplotypeScore=79.4946;InbreedingCoeff=0.5375;MQ=74.83;MQ0=0;MQRankSum=0.433;QD=12.93;ReadPosRankSum=3.886;VQSLOD=2.6561;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:62.14:0,62,910	1/1:5,0:5:8.96:67,9,0	0/0:12,0:11:5.65:0,6,147	0/0:10,0:11:23.80:0,24,205	0/1:10,2:12:11.59:209,0,12	1/1:15,1:16:7.29:222,7,0	1/1:9,1:10:5.99:79,6,0	0/1:17,0:17:5.05:188,0,5	1/1:11,0:11:24.55:202,25,0	0/0:23,0:23:65.45:0,65,969	0/0:18,0:18:37.87:0,38,633	0/0:6,0:6:17.84:0,18,260	0/0:11,0:10:18.01:0,18,222	0/0:7,0:7:15.02:0,15,224	1/1:12,0:11:0.25:167,0,0	0/0:10,0:10:29.99:0,30,474	1/1:22,0:22:19.60:252,20,0	0/0:21,0:21:39.50:0,39,576	1/1:11,0:11:4.72:171,5,0	0/1:7,3:10:1.17:185,0,1	0/1:15,1:16:34.56:87,0,35	0/0:9,0:9:21.02:0,21,346	0/1:7,0:8:10.53:63,0,11	1/1:7,1:8:6.87:64,7,0	0/0:26,0:26:75.15:0,75,1295	0/1:19,1:20:1.31:305,0,1	1/1:13,1:13:22.72:236,23,0	1/1:15,2:17:40.04:399,40,0
chr10	90728926	.	TTC	T	3913.67	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=2.053;DP=395;FS=3.153;HRun=0;HaplotypeScore=63.4553;InbreedingCoeff=0.7407;MQ=73.60;MQ0=0;MQRankSum=-1.443;QD=16.11;ReadPosRankSum=0.311;VQSLOD=3.3776;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:38.96:0,39,564	1/1:6,0:6:11.98:106,12,0	0/0:12,0:11:6.19:0,6,124	0/0:10,0:10:21.94:0,22,157	1/1:13,1:14:16.91:284,17,0	1/1:17,1:18:20.89:361,21,0	1/1:11,0:11:6.01:64,6,0	1/1:3,13:16:29.07:275,29,0	1/1:11,0:11:27.46:240,27,0	0/0:24,0:24:34.83:0,35,624	0/1:21,0:21:12.24:12,0,320	0/1:6,0:6:8.98:9,0,125	0/0:10,0:9:17.80:0,18,154	0/0:7,0:7:15:0,15,144	1/1:11,1:11:10.83:201,11,0	0/0:10,0:10:23.65:0,24,268	1/1:19,2:21:46.97:400,47,0	0/0:16,5:21:4.75:0,5,365	1/1:11,0:11:27.01:249,27,0	1/1:10,1:11:22.55:199,23,0	0/1:16,0:16:4.55:83,0,5	0/0:7,0:7:17.77:0,18,196	1/1:7,2:9:21.24:197,21,0	1/1:8,0:8:15.47:141,15,0	0/0:26,0:26:74.80:0,75,849	1/1:16,4:20:25.86:412,26,0	1/1:14,0:13:29.51:269,30,0	1/1:17,1:18:41.64:411,42,0
chr10	90728927	.	TC	T	3730.48	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=2.290;DP=422;FS=8.750;HRun=1;HaplotypeScore=66.9228;InbreedingCoeff=0.7764;MQ=72.76;MQ0=1;MQRankSum=-1.525;QD=14.74;ReadPosRankSum=-1.596;VQSLOD=1.9919;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:47.06:0,47,457	1/1:7,0:7:11.96:95,12,0	0/0:12,0:11:6.32:0,6,114	0/0:10,1:10:12.80:0,13,137	1/1:15,0:15:17.29:242,17,0	1/1:16,2:18:28.55:370,29,0	1/1:10,0:10:6:52,6,0	1/1:16,0:16:37.48:278,37,0	1/1:13,0:13:27.44:229,27,0	0/0:24,0:24:21.08:0,21,510	0/0:21,0:21:1.52:0,2,241	0/0:6,0:6:5.65:0,6,95	0/0:12,0:11:16.69:0,17,134	0/1:10,0:10:3.84:4,0,80	1/1:13,2:14:11.44:203,11,0	0/1:12,0:12:0.19:0,0,169	1/1:23,2:25:49.76:415,50,0	0/0:21,0:21:19.60:0,20,306	1/1:10,0:10:26.94:219,27,0	1/1:13,0:13:25.60:192,26,0	1/1:17,0:17:0.19:66,0,0	0/0:9,0:9:17.49:0,17,155	1/1:8,1:9:22:169,22,0	1/1:10,1:11:15.86:130,16,0	0/0:28,0:28:73.26:0,73,664	1/1:19,1:20:26.41:386,26,0	1/1:10,4:13:34.09:267,34,0	1/1:17,1:18:50.30:415,50,0
chr10	90728928	.	CT	C	39.86	PASS	AB=0.980;AC=13;AF=0.232;AN=56;BaseQRankSum=8.800;DP=479;FS=1.393;HRun=16;HaplotypeScore=93.7815;InbreedingCoeff=-0.0913;MQ=72.77;MQ0=1;MQRankSum=1.594;QD=0.17;ReadPosRankSum=7.794;VQSLOD=-0.3796;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,2:26:2.46:2,0,185	0/0:7,0:7:2.13:0,2,22	0/0:15,0:12:7.79:0,8,51	0/0:12,1:12:5.59:0,6,34	0/1:19,0:19:6.03:6,0,49	0/1:20,0:20:14.37:14,0,30	0/1:13,0:13:5.45:5,0,14	0/0:18,0:18:8.90:0,9,60	0/0:14,0:14:5.57:0,6,60	0/0:23,0:24:18.57:0,19,262	0/1:19,3:24:34.67:35,0,124	0/0:7,0:7:14.72:0,15,110	0/0:10,0:10:22.32:0,22,156	0/0:12,0:12:16.76:0,17,123	0/0:15,0:14:12.42:0,12,94	0/0:14,1:15:11.29:0,11,180	0/0:26,0:26:2.78:0,3,109	0/1:24,0:24:6.59:7,0,83	0/1:13,0:13:5.73:6,0,13	0/1:16,0:16:26.96:27,0,44	0/1:20,0:20:0.09:0,0,57	0/0:10,0:12:26.79:0,27,208	0/0:9,0:9:0.15:0,0,17	0/0:15,0:15:7.44:0,7,64	0/0:27,1:29:44.13:0,44,440	0/1:25,0:25:8.70:18,0,9	0/1:17,0:16:6.34:6,0,17	1/1:19,1:20:12.84:48,13,0
chr10	90731053	.	T	TA	269.91	PASS	AC=14;AF=0.583;AN=24;BaseQRankSum=-2.335;DP=25;FS=8.129;HRun=0;HaplotypeScore=22.9285;InbreedingCoeff=0.3611;MQ=81.39;MQ0=0;MQRankSum=0.311;QD=16.87;ReadPosRankSum=0.934;VQSLOD=4.8667;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:2.60:12,3,0	./.	0/0:2,0:0:2.04:0,2,6	0/0:3,0:1:2.92:0,3,17	./.	1/1:0,2:2:6.02:91,6,0	1/1:0,1:1:3.01:34,3,0	1/1:1,2:3:6.01:74,6,0	./.	0/0:1,0:1:1.82:0,2,5	./.	./.	./.	./.	1/1:1,0:1:2.80:13,3,0	0/0:1,0:1:0:0,0,0	1/1:1,2:3:6.01:69,6,0	./.	./.	0/0:1,0:1:0:0,0,0	1/1:2,1:3:5.88:63,6,0	./.	./.	./.	./.	./.	./.	./.
chr10	90731058	.	T	TG	939.32	PASS	AB=1.000;AC=33;AF=0.971;AN=34;BaseQRankSum=-2.050;DP=41;FS=0.000;HRun=4;HaplotypeScore=13.2392;InbreedingCoeff=-0.0824;MQ=72.10;MQ0=0;MQRankSum=2.211;QD=24.09;ReadPosRankSum=-1.166;VQSLOD=1.4251;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,3:4:9.03:123,9,0	./.	1/1:2,1:1:5.91:39,6,0	0/1:3,0:1:5.89:6,0,19	./.	1/1:1,2:3:6.02:79,6,0	1/1:0,1:1:3.01:41,3,0	1/1:2,2:4:9.02:110,9,0	./.	1/1:0,2:2:5.99:61,6,0	./.	1/1:1,0:1:3:25,3,0	./.	1/1:1,0:1:3.01:40,3,0	1/1:3,0:3:5.19:79,5,0	1/1:0,1:1:3.01:41,3,0	1/1:0,3:3:9.03:118,9,0	1/1:2,0:2:3.01:40,3,0	./.	1/1:0,1:1:3.01:41,3,0	1/1:1,4:5:9.03:119,9,0	1/1:1,0:1:3.01:40,3,0	1/1:1,0:1:2.98:21,3,0	./.	./.	./.	./.	./.
chr10	90731778	.	T	TTGTGTGTGTGTGTGTG	5756.94	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=0.899;DP=624;FS=6.068;HRun=0;HaplotypeScore=251.6887;InbreedingCoeff=0.6993;MQ=67.27;MQ0=12;MQRankSum=-6.776;QD=20.49;ReadPosRankSum=-5.721;VQSLOD=2.0271;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:51:84.47:0,84,3061	0/0:7,0:8:15.05:0,15,561	0/0:40,0:21:2.96:0,3,93	0/0:47,0:30:5.07:0,5,93	0/1:16,0:16:0.10:0,0,0	1/1:16,0:16:3.01:188,3,0	1/1:23,0:22:6.02:359,6,0	1/1:24,0:22:39.51:1084,40,0	1/1:13,0:23:3.01:209,3,0	0/0:19,0:19:14.77:0,15,736	0/0:12,0:13:15.05:0,15,602	0/0:20,0:20:30.27:0,30,1403	0/0:12,0:15:36.11:0,36,1308	0/0:19,0:22:45.12:0,45,1611	0/0:20,0:22:42.14:0,42,1762	0/0:19,0:20:51.16:0,51,1750	0/0:28,0:31:41.18:0,41,2031	0/1:20,0:20:99:149,0,1389	1/1:22,0:21:24.04:1222,24,0	1/1:15,1:15:6.46:48,6,0	1/1:25,0:25:3.01:91,3,0	0/0:9,0:13:18.06:0,18,680	1/1:9,0:9:2.86:23,3,0	1/1:27,0:27:8.27:322,8,0	0/0:17,0:21:36.12:0,36,1379	1/1:25,0:24:30.05:1059,30,0	1/1:17,3:25:12.04:727,12,0	1/1:0,1:6:6.02:276,6,0
chr10	90732365	.	T	TCATGTCAC	10200.85	PASS	AB=0.538;AC=15;AF=0.268;AN=56;BaseQRankSum=-6.777;DP=583;FS=1.974;HRun=0;HaplotypeScore=158.3328;InbreedingCoeff=0.9137;MQ=86.28;MQ0=0;MQRankSum=-13.367;QD=75.01;ReadPosRankSum=1.498;VQSLOD=5.3145;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,135,3568	0/0:6,0:6:15.05:0,15,400	0/0:22,0:22:51.10:0,51,1140	0/0:24,0:24:44.67:0,45,1014	0/0:23,0:23:44.92:0,45,1131	0/0:15,0:15:39.13:0,39,1033	0/0:30,0:30:77.84:0,78,1907	0/0:27,0:26:69.23:0,69,1698	0/0:17,0:17:48.15:0,48,1225	1/1:6,9:16:42.14:1591,42,0	0/0:3,8:12:0.18:0,0,1	1/1:6,16:22:48.09:1722,48,0	1/1:7,15:22:42.14:1750,42,0	1/1:5,14:20:39.05:1443,39,0	0/0:23,0:23:57.20:0,57,1522	0/1:3,15:21:0.07:1632,0,0	0/0:32,0:32:81.26:0,81,1988	1/1:1,8:9:21.07:893,21,0	0/0:24,0:23:56.69:0,57,1077	0/0:13,0:13:30.10:0,30,770	0/0:38,0:38:81.28:0,81,2163	1/1:3,10:14:9.46:276,9,0	0/0:12,0:12:27.09:0,27,720	0/0:39,0:39:87.28:0,87,2216	1/1:4,8:12:21.07:894,21,0	0/0:16,0:16:42.13:0,42,1028	0/0:9,0:9:24.07:0,24,585	0/0:16,0:16:48.13:0,48,1185
chr10	90732441	.	T	TGC	2377.42	PASS	AB=1.000;AC=19;AF=0.352;AN=54;BaseQRankSum=-1.756;DP=588;FS=29.449;HRun=0;HaplotypeScore=120.8725;InbreedingCoeff=0.8605;MQ=61.44;MQ0=17;MQRankSum=-0.022;QD=13.98;ReadPosRankSum=0.970;VQSLOD=1.8231;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:88.05:0,88,904	./.	0/0:22,0:13:24.66:0,25,267	0/0:23,0:15:18.37:0,18,267	0/0:13,0:13:20.97:0,21,173	0/0:18,0:17:17.70:0,18,149	0/0:31,0:31:38.46:0,38,352	0/0:38,0:34:85.30:0,85,735	0/0:25,0:23:45.40:0,45,372	1/1:21,1:21:52.53:480,53,0	1/1:15,0:15:23.71:249,24,0	1/1:23,1:24:34.74:398,35,0	1/1:22,0:22:38.56:336,39,0	1/1:14,1:15:7.92:153,8,0	0/1:13,0:13:4.57:5,0,124	1/1:20,1:21:2.52:286,3,0	0/0:32,0:31:47.84:0,48,384	1/1:11,0:11:29.82:255,30,0	0/0:15,0:16:40.48:0,40,346	0/0:11,0:10:17.88:0,18,149	0/0:26,0:26:41.82:0,42,349	1/1:16,0:15:23.90:275,24,0	0/0:12,0:11:23.89:0,24,188	0/0:28,0:31:29.17:0,29,260	1/1:11,0:11:2.63:140,3,0	0/0:27,0:26:55.61:0,56,509	0/0:12,0:12:22.83:0,23,201	0/0:30,0:26:58.72:0,59,444
chr10	90732442	.	G	GCTCT	3054.04	PASS	AB=0.917;AC=41;AF=0.788;AN=52;BaseQRankSum=2.188;DP=628;FS=0.931;HRun=0;HaplotypeScore=160.0899;InbreedingCoeff=0.0989;MQ=58.81;MQ0=17;MQRankSum=-2.486;QD=5.49;ReadPosRankSum=0.536;VQSLOD=2.6538;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:45:63.94:64,0,475	1/1:3,0:3:3.01:54,3,0	./.	./.	0/1:15,0:15:0.02:0,0,0	0/1:10,8:17:0:1,0,0	1/1:28,1:29:13.65:148,14,0	1/1:40,0:36:11.93:114,12,0	1/1:31,0:29:9.47:102,9,0	1/1:21,0:21:19.29:161,19,0	1/1:14,0:16:14.97:138,15,0	0/1:20,0:25:68.01:314,0,68	1/1:19,0:23:22.83:308,23,0	0/1:14,0:16:35.33:105,0,35	1/1:9,1:14:8.62:134,9,0	0/1:19,0:21:28.21:171,0,28	1/1:21,11:33:3.01:57,3,0	1/1:9,0:11:14.97:207,15,0	1/1:26,0:24:24.02:367,24,0	0/1:11,0:10:0:0,0,0	0/0:28,0:28:0:0,0,0	1/1:17,0:17:17.61:191,18,0	0/1:12,0:10:0:0,0,0	1/1:34,0:34:18.36:202,18,0	0/1:11,0:12:22.72:23,0,42	1/1:32,0:30:18.59:254,19,0	1/1:13,0:13:8.66:52,9,0	1/1:35,0:29:2.24:5,2,0
chr10	90733047	.	T	TAATTAATAAATA	6422.02	PASS	AB=1.000;AC=29;AF=0.537;AN=54;BaseQRankSum=-2.866;DP=267;FS=4.487;HRun=0;HaplotypeScore=80.2303;InbreedingCoeff=0.6430;MQ=52.52;MQ0=8;MQRankSum=-3.260;QD=36.28;ReadPosRankSum=-1.236;VQSLOD=3.7989;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:30.03:0,30,604	0/1:6,0:6:61.84:137,0,62	./.	0/0:3,0:1:2.94:0,3,18	1/1:2,9:12:29.49:367,29,0	1/1:13,0:13:35.93:574,36,0	1/1:7,0:7:17.78:283,18,0	1/1:30,0:22:53.76:521,54,0	1/1:7,0:7:20.95:172,21,0	0/0:7,0:7:21.03:0,21,200	0/0:7,0:7:18.04:0,18,334	0/0:4,0:4:3.01:0,3,92	0/0:1,0:1:3:0,3,25	0/0:5,0:5:11.97:0,12,162	0/1:8,0:8:55.71:188,0,56	0/0:14,0:14:36.08:0,36,774	0/1:23,0:21:99:362,0,145	0/0:16,0:15:41.93:0,42,517	1/1:3,8:13:35.88:605,36,0	1/1:1,3:7:14.89:291,15,0	1/1:2,0:2:5.94:43,6,0	0/0:7,0:7:17.98:0,18,159	1/1:6,0:6:17.99:154,18,0	1/1:2,0:2:5.99:48,6,0	0/0:9,0:7:15.04:0,15,304	1/1:2,2:7:11.98:255,12,0	1/1:3,5:12:9.03:433,9,0	1/1:12,8:20:39.13:1990,39,0
chr10	90733090	.	TAAAA	T	1885.90	PASS	AB=1.000;AC=21;AF=0.404;AN=52;BaseQRankSum=-0.286;DP=282;FS=1.283;HRun=4;HaplotypeScore=50.7699;InbreedingCoeff=0.6343;MQ=50.10;MQ0=9;MQRankSum=5.562;QD=15.46;ReadPosRankSum=-0.985;VQSLOD=-0.7374;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:41.98:0,42,593	0/1:4,0:4:30.96:31,0,56	./.	0/0:4,0:1:2.97:0,3,20	0/0:5,0:5:14.95:0,15,212	0/0:11,0:11:7.05:0,7,341	0/0:5,0:5:14.89:0,15,167	0/0:37,0:33:95.77:0,96,1060	0/0:4,0:4:12.02:0,12,142	1/1:10,0:10:26.98:241,27,0	1/1:0,4:4:9.03:185,9,0	1/1:0,4:4:3.01:61,3,0	1/1:8,0:8:20.98:175,21,0	1/1:6,0:6:14.99:144,15,0	0/1:10,0:10:99:120,0,122	1/1:0,12:12:18.06:374,18,0	0/1:27,0:25:99:191,0,279	1/1:1,12:13:9.02:181,9,0	0/0:10,0:9:26.96:0,27,381	0/0:7,0:7:20.98:0,21,248	./.	1/1:9,0:9:26.68:193,27,0	0/0:2,0:2:5.96:0,6,44	0/0:5,0:5:14.96:0,15,127	1/1:0,15:14:9.03:182,9,0	0/0:9,0:9:27.01:0,27,325	0/0:12,0:12:36.05:0,36,475	0/0:28,0:28:78.08:0,78,1453
chr10	90733094	.	A	AAATAAAT	860.79	PASS	AB=0.948;AC=11;AF=0.212;AN=52;BaseQRankSum=4.447;DP=294;FS=5.911;HRun=0;HaplotypeScore=71.1948;InbreedingCoeff=-0.3036;MQ=50.28;MQ0=11;MQRankSum=-3.255;QD=6.72;ReadPosRankSum=-1.886;VQSLOD=0.5708;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:48.14:0,48,1059	0/1:2,2:4:6.91:194,0,7	./.	0/0:5,0:1:2.97:0,3,20	0/1:5,0:5:32.29:32,0,215	0/0:11,0:11:0.99:0,1,451	0/0:6,0:6:18.03:0,18,291	0/0:35,0:32:90.13:0,90,1712	0/0:3,0:3:9.02:0,9,166	0/1:10,0:10:32.42:32,0,83	0/0:5,0:5:9.03:0,9,117	0/0:4,0:4:3.01:0,3,41	0/0:8,0:8:20.66:0,21,130	0/1:7,0:7:10.09:10,0,98	0/1:8,2:10:91.04:165,0,91	0/0:13,0:13:18.06:0,18,237	0/1:23,2:23:99:331,0,144	0/0:12,0:12:9.03:0,9,125	0/1:10,0:10:16.56:17,0,458	0/1:9,0:9:18.89:19,0,312	./.	0/1:9,0:9:32.14:32,0,65	0/0:4,0:4:5.99:0,6,88	0/0:5,0:5:15.03:0,15,233	0/0:15,0:14:9.03:0,9,121	0/1:11,0:11:16:16,0,567	0/0:15,0:15:3.30:0,3,619	0/1:28,0:28:99:150,0,1119
chr10	90733660	.	C	CCTCTT	5450.72	PASS	AB=0.722;AC=52;AF=0.963;AN=54;BaseQRankSum=0.925;DP=190;FS=17.514;HRun=0;HaplotypeScore=163.6632;InbreedingCoeff=-0.0964;MQ=62.72;MQ0=0;MQRankSum=-2.818;QD=28.69;ReadPosRankSum=1.291;VQSLOD=3.3629;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:15.05:312,15,0	1/1:3,0:3:9:152,9,0	0/1:5,2:7:48.51:306,0,49	0/1:5,2:8:9.58:454,0,10	1/1:5,0:5:6.02:109,6,0	1/1:3,0:2:6.02:130,6,0	1/1:7,0:5:14.41:272,14,0	1/1:7,0:6:15.05:288,15,0	1/1:7,0:6:9.03:214,9,0	1/1:8,0:8:12.04:268,12,0	1/1:3,0:3:6.02:128,6,0	1/1:10,0:5:9.03:167,9,0	1/1:6,0:5:6.02:120,6,0	1/1:6,0:6:3.01:73,3,0	1/1:15,0:10:17.85:319,18,0	1/1:9,0:9:12.04:279,12,0	1/1:4,0:3:2.80:13,3,0	1/1:9,0:8:12:199,12,0	1/1:11,0:9:9.03:195,9,0	1/1:6,0:6:12.04:235,12,0	1/1:12,0:11:15.05:295,15,0	1/1:4,0:4:3.01:77,3,0	1/1:7,0:7:6.02:115,6,0	1/1:4,0:4:6.02:126,6,0	1/1:9,0:9:15.05:310,15,0	1/1:7,0:6:12.02:220,12,0	1/1:3,0:3:3.48:76,3,0	./.
chr10	90734211	.	CA	C	6013.97	PASS	AB=0.895;AC=54;AF=0.964;AN=56;BaseQRankSum=0.140;DP=382;FS=11.040;HRun=1;HaplotypeScore=84.3629;InbreedingCoeff=-0.0402;MQ=95.20;MQ0=0;MQRankSum=-0.637;QD=15.74;ReadPosRankSum=4.259;VQSLOD=3.8823;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:50.26:337,50,0	1/1:5,0:5:9.38:64,9,0	0/1:16,4:20:7.42:140,0,7	0/1:21,1:21:68.38:164,0,68	1/1:11,0:11:17.06:109,17,0	1/1:12,0:11:26.63:185,27,0	1/1:18,0:18:43.65:288,44,0	1/1:27,0:27:74.90:407,75,0	1/1:11,0:11:32.58:228,33,0	1/1:18,0:18:28.61:218,29,0	1/1:7,0:7:17.86:134,18,0	1/1:13,0:13:35.70:264,36,0	1/1:13,0:13:35.78:278,36,0	1/1:7,0:7:14.97:120,15,0	1/1:12,0:12:26.70:195,27,0	1/1:12,0:12:32.22:246,32,0	1/1:12,0:12:32.41:207,32,0	1/1:4,0:4:11.92:87,12,0	1/1:13,0:13:37.81:221,38,0	1/1:16,0:16:44.27:294,44,0	1/1:16,0:16:41.27:263,41,0	1/1:19,0:19:47.54:350,48,0	1/1:8,0:8:17.75:121,18,0	1/1:18,0:18:37.35:222,37,0	1/1:17,0:17:47.34:329,47,0	1/1:16,0:16:46.52:290,47,0	1/1:11,0:11:26.50:172,27,0	1/1:4,0:4:11.84:80,12,0
chr10	90734254	.	CAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	C	1698.07	PASS	AB=0.933;AC=17;AF=0.304;AN=56;BaseQRankSum=3.250;DP=456;FS=1.609;HRun=0;HaplotypeScore=360.3784;InbreedingCoeff=0.5709;MQ=81.59;MQ0=17;MQRankSum=-6.209;QD=15.72;ReadPosRankSum=0.531;VQSLOD=1.4708;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:36.58:0,37,2275	0/1:6,1:7:99:263,0,452	0/0:36,0:19:1.55:0,2,5	0/0:56,0:31:8.30:0,8,124	0/0:11,0:11:6.02:0,6,417	0/0:9,0:9:9.92:0,10,802	0/0:19,0:19:21.50:0,22,1232	0/0:22,0:21:15.52:0,16,959	0/0:13,0:13:18.04:0,18,1025	1/1:18,0:18:17.83:127,18,0	1/1:6,0:6:2.97:20,3,0	1/1:11,0:11:11.85:80,12,0	0/1:11,1:11:13.87:296,0,14	1/1:6,0:6:2.97:21,3,0	0/0:11,0:13:15.05:0,15,940	1/1:10,2:12:14.94:606,15,0	0/0:13,0:13:27.09:0,27,1725	0/1:7,0:7:71.64:74,0,72	0/0:18,0:17:17.80:0,18,716	0/0:16,0:16:27.09:0,27,1392	0/0:23,0:22:21.54:0,22,1180	1/1:13,0:12:11.76:78,12,0	0/0:11,0:11:9.03:0,9,408	0/0:22,0:22:33.10:0,33,1791	1/1:15,1:16:10.19:315,10,0	0/0:22,0:22:45.15:0,45,2575	0/0:15,0:12:36.12:0,36,2505	0/0:5,0:3:3.01:0,3,233
chr10	90734731	.	ATGCTTGTGGGGT	A	15024.20	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=16.705;DP=538;FS=9.790;HRun=0;HaplotypeScore=193.5932;InbreedingCoeff=0.9970;MQ=87.33;MQ0=0;MQRankSum=-15.935;QD=82.10;ReadPosRankSum=3.376;VQSLOD=4.1068;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.25:0,78,4362	1/1:1,10:11:27.05:915,27,0	0/0:28,0:28:81.28:0,81,4711	0/0:17,0:17:47.37:0,47,2315	0/0:32,0:32:90.30:0,90,5146	0/0:18,0:18:48.16:0,48,2831	0/0:28,0:28:75.24:0,75,4151	0/0:33,0:33:87.27:0,87,4912	0/0:13,0:13:39.13:0,39,2194	1/1:3,21:24:63.20:2131,63,0	1/1:2,11:13:27.09:981,27,0	1/1:3,9:12:24.08:895,24,0	1/1:1,16:17:45.15:1676,45,0	1/1:2,6:8:18.06:671,18,0	1/1:2,19:21:51.17:1901,51,0	1/1:1,11:12:21.07:783,21,0	1/1:1,12:12:33.11:1205,33,0	1/1:6,11:17:27.09:984,27,0	0/0:26,0:26:75.24:0,75,4170	0/0:17,0:17:51.18:0,51,3009	0/0:16,0:16:39.13:0,39,2379	1/1:4,21:25:60.21:2100,60,0	0/0:20,0:20:60.21:0,60,3659	0/0:23,0:23:66.23:0,66,3713	1/1:1,9:10:21.07:783,21,0	0/0:25,0:25:66.23:0,66,4003	0/0:17,0:17:51.18:0,51,2922	0/0:15,0:15:45.15:0,45,2545
chr10	90735869	.	GA	G	2024.16	PASS	AB=0.740;AC=26;AF=0.464;AN=56;BaseQRankSum=7.454;DP=575;FS=0.000;HRun=14;HaplotypeScore=63.9788;InbreedingCoeff=0.4368;MQ=54.41;MQ0=30;MQRankSum=-0.209;QD=6.68;ReadPosRankSum=1.934;VQSLOD=2.4382;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,4:55:13.39:0,13,845	0/0:7,0:7:6.01:0,6,56	0/0:23,1:3:3.17:0,3,44	0/0:36,0:9:3.22:0,3,17	0/1:9,8:17:5.28:105,0,5	0/1:4,11:17:18.01:169,0,18	1/1:7,11:16:20.08:158,20,0	0/1:11,11:23:54.19:151,0,54	1/1:5,4:8:7.96:46,8,0	0/1:17,2:19:17.14:17,0,135	0/0:12,1:13:0.10:0,0,126	0/0:13,3:15:6.29:0,6,187	0/0:13,0:14:17.16:0,17,186	0/0:15,0:17:13.89:0,14,243	0/1:9,1:11:6.39:6,0,111	0/0:14,1:16:15.34:0,15,259	0/0:35,2:37:45.87:0,46,676	0/0:21,2:21:6.89:0,7,348	1/1:6,6:11:20.92:118,21,0	1/1:10,9:21:3.38:126,3,0	1/1:9,12:21:25.81:170,26,0	0/1:10,3:14:27.64:28,0,168	1/1:10,12:23:26.02:159,26,0	1/1:8,11:19:29.35:194,29,0	0/0:12,0:12:20.92:0,21,177	1/1:12,14:24:48.61:318,49,0	1/1:8,24:33:52.19:346,52,0	1/1:6,2:7:17.02:104,17,0
chr10	90739919	.	A	AAAATAAAT	2561.46	PASS	AC=22;AF=0.611;AN=36;BaseQRankSum=2.252;DP=242;FS=17.787;HRun=0;HaplotypeScore=62.6688;InbreedingCoeff=0.6367;MQ=58.62;MQ0=0;MQRankSum=-5.889;QD=19.41;ReadPosRankSum=-1.370;VQSLOD=0.7873;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:12.03:0,12,250	1/1:2,2:4:6.02:245,6,0	./.	./.	1/1:9,0:9:3.01:71,3,0	1/1:7,0:7:6.02:177,6,0	./.	1/1:27,0:27:27.09:573,27,0	1/1:11,0:11:3.01:36,3,0	0/0:7,0:7:3.01:0,3,75	0/0:9,0:9:6.01:0,6,97	0/0:4,0:4:3.01:0,3,75	./.	0/0:6,0:6:9.03:0,9,225	./.	./.	1/1:23,8:31:18.06:620,18,0	0/0:12,0:12:17.99:0,18,362	1/1:11,0:11:7.82:125,8,0	1/1:8,0:10:3.01:104,3,0	./.	./.	./.	1/1:5,0:8:3.01:104,3,0	0/0:10,0:10:15.05:0,15,375	./.	1/1:5,0:6:6.02:179,6,0	1/1:7,0:8:24.08:467,24,0
chr10	90740063	.	GAA	G	1793.74	PASS	AB=0.780;AC=18;AF=0.321;AN=56;BaseQRankSum=-3.309;DP=362;FS=7.370;HRun=12;HaplotypeScore=64.5064;InbreedingCoeff=0.8114;MQ=60.07;MQ0=7;MQRankSum=5.716;QD=16.02;ReadPosRankSum=4.388;VQSLOD=2.1897;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:32:76.68:0,77,1028	0/0:4,0:4:9.03:0,9,125	0/0:23,0:5:11.61:0,12,72	0/1:9,0:5:8.94:9,0,20	0/0:6,0:8:18.04:0,18,207	0/0:3,0:10:27.04:0,27,279	0/0:5,0:10:23.64:0,24,252	0/0:16,0:21:45.05:0,45,514	0/0:5,0:12:33.05:0,33,343	1/1:1,9:11:29.78:280,30,0	1/1:3,17:21:38.80:443,39,0	1/1:1,7:9:20.78:195,21,0	1/1:3,9:11:21.04:214,21,0	1/1:1,7:8:15.03:153,15,0	0/0:10,0:11:23.57:0,24,321	1/1:1,9:10:24.05:244,24,0	0/0:30,0:31:74.72:0,75,1034	0/1:3,11:14:2.27:245,0,2	0/0:10,0:19:48.08:0,48,515	0/0:10,0:15:35.73:0,36,353	0/0:6,0:12:23.98:0,24,231	1/1:2,5:7:14.82:152,15,0	0/0:6,0:10:14.98:0,15,134	0/0:3,0:5:8.50:0,9,66	1/1:3,8:10:5.97:61,6,0	0/0:5,0:5:11.99:0,12,133	0/0:6,0:11:21.04:0,21,220	0/0:2,0:4:8.73:0,9,62
chr10	90740088	.	AT	A	6128.65	PASS	AB=0.556;AC=25;AF=0.446;AN=56;BaseQRankSum=2.334;DP=397;FS=0.441;HRun=1;HaplotypeScore=59.0954;InbreedingCoeff=0.9065;MQ=87.98;MQ0=0;MQRankSum=-9.545;QD=37.37;ReadPosRankSum=-1.225;VQSLOD=4.6039;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.31:0,90,1434	0/0:3,0:3:9.03:0,9,144	0/0:25,0:19:50.38:0,50,766	0/0:15,0:15:35.48:0,35,458	1/1:0,6:6:18.06:249,18,0	1/1:0,12:12:33.11:460,33,0	1/1:0,14:14:39.13:543,39,0	1/1:0,25:25:75.23:1029,75,0	1/1:0,19:19:54.18:748,54,0	0/0:11,0:11:33.11:0,33,526	0/0:17,0:17:51.17:0,51,799	0/0:15,0:15:42.14:0,42,671	0/0:10,0:10:24.06:0,24,360	0/0:13,0:13:36.12:0,36,575	0/0:15,0:15:45.15:0,45,719	0/0:16,0:16:45.14:0,45,696	0/0:29,0:29:87.25:0,87,1349	0/0:11,0:11:30.10:0,30,470	1/1:0,19:19:57.19:791,57,0	1/1:0,10:10:21.07:293,21,0	1/1:1,16:17:45.15:628,45,0	0/0:8,0:8:24.08:0,24,384	1/1:0,11:11:30.10:419,30,0	1/1:0,5:5:15.05:206,15,0	0/0:13,0:13:27.07:0,27,408	0/1:2,8:10:65.87:304,0,66	1/1:0,11:11:24.08:332,24,0	1/1:0,5:5:9.03:126,9,0
chr10	90743330	.	T	TTAATAG	3574.81	PASS	AB=1.000;AC=33;AF=0.660;AN=50;BaseQRankSum=-5.643;DP=230;FS=1.351;HRun=0;HaplotypeScore=51.4803;InbreedingCoeff=0.3685;MQ=57.23;MQ0=2;MQRankSum=0.629;QD=21.67;ReadPosRankSum=-1.876;VQSLOD=2.8533;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:27.02:0,27,373	./.	./.	0/0:11,0:9:15.03:0,15,153	1/1:1,10:13:26.58:338,27,0	1/1:14,2:16:36.02:666,36,0	1/1:5,0:5:9.01:90,9,0	1/1:33,0:32:77.97:753,78,0	1/1:6,0:6:11.97:96,12,0	1/1:2,0:2:3.01:78,3,0	0/1:5,0:5:36.65:37,0,63	0/1:6,0:6:18.97:71,0,19	0/1:4,0:4:20.96:74,0,21	0/0:1,0:1:2.92:0,3,17	0/0:4,0:4:12.02:0,12,152	0/0:1,0:1:3:0,3,25	0/0:30,0:30:81.17:0,81,1152	0/1:9,0:9:52.93:95,0,53	1/1:17,0:16:38.71:322,39,0	1/1:5,0:5:11.77:80,12,0	1/1:10,0:10:18:255,18,0	./.	1/1:6,0:6:8.98:72,9,0	1/1:4,0:4:2.97:20,3,0	0/1:2,0:2:18.97:73,0,19	1/1:4,4:9:17.82:286,18,0	1/1:4,5:9:3.01:101,3,0	1/1:4,0:3:8.95:68,9,0
chr10	90743336	.	GTAA	G	828.28	PASS	AC=4;AF=0.091;AN=44;BaseQRankSum=-1.393;DP=215;FS=0.000;HRun=0;HaplotypeScore=42.9325;InbreedingCoeff=0.3525;MQ=57.28;MQ0=2;MQRankSum=2.694;QD=23.67;ReadPosRankSum=3.953;VQSLOD=3.3483;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:21.07:0,21,409	./.	0/0:4,0:2:3.01:0,3,47	./.	0/0:12,0:12:8.92:0,9,144	0/0:15,0:15:30.08:0,30,452	0/0:3,0:3:3.01:0,3,58	0/0:36,0:35:42.13:0,42,747	0/0:4,0:4:3.01:0,3,42	0/0:0,0:1:3.01:0,3,39	0/0:4,0:4:3.01:0,3,45	0/0:3,0:6:3.01:0,3,39	0/0:2,0:4:3.01:0,3,39	0/0:1,0:1:2.97:0,3,20	1/1:2,3:5:6.02:81,6,0	0/0:2,0:2:0:0,0,0	1/1:7,23:30:63.21:850,63,0	0/0:3,0:7:6.01:0,6,66	0/0:18,0:16:9.03:0,9,148	./.	0/0:9,0:9:12.04:0,12,190	./.	./.	./.	0/0:1,0:2:3.01:0,3,39	0/0:8,0:8:9.03:0,9,158	0/0:6,0:6:3.01:0,3,42	0/0:5,0:4:9.02:0,9,144
chr10	90744726	.	T	TA	3975.50	PASS	AB=0.833;AC=26;AF=0.464;AN=56;BaseQRankSum=-10.002;DP=396;FS=0.000;HRun=10;HaplotypeScore=39.1426;InbreedingCoeff=0.7397;MQ=78.58;MQ0=5;MQRankSum=-1.917;QD=18.41;ReadPosRankSum=0.284;VQSLOD=3.6227;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:47.92:0,48,389	0/0:6,0:6:17.98:0,18,148	0/1:36,0:18:11.13:11,0,84	0/0:28,0:10:8.89:0,9,63	1/1:0,16:16:48.08:496,48,0	1/1:4,13:17:33.07:343,33,0	1/1:1,1:2:3.01:32,3,0	1/1:9,25:34:53.53:724,54,0	1/1:4,7:11:12.03:127,12,0	0/0:19,0:18:41.69:0,42,331	0/0:16,0:16:41.95:0,42,344	0/0:2,0:3:8.03:0,8,55	0/0:1,0:1:2.98:0,3,22	0/0:7,0:7:8.97:0,9,74	0/0:7,0:7:14.97:0,15,123	0/0:7,0:7:17.96:0,18,145	0/0:30,0:30:68.88:0,69,558	0/0:15,0:15:32.92:0,33,265	1/1:5,11:15:33.07:342,33,0	1/1:2,9:11:27.07:286,27,0	1/1:0,6:6:18.05:191,18,0	0/0:4,0:4:2.99:0,3,25	0/1:6,6:12:28.15:138,0,28	1/1:4,2:6:6.02:64,6,0	0/0:13,0:13:29.95:0,30,243	1/1:3,15:19:44.95:460,45,0	1/1:3,15:18:39.10:413,39,0	1/1:0,11:11:33.08:350,33,0
chr10	90745952	.	A	ATTGT	5158.63	PASS	AB=1.000;AC=25;AF=0.463;AN=54;BaseQRankSum=8.326;DP=359;FS=7.349;HRun=0;HaplotypeScore=138.3235;InbreedingCoeff=0.8647;MQ=57.52;MQ0=17;MQRankSum=-6.753;QD=37.65;ReadPosRankSum=0.328;VQSLOD=4.9813;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:66.13:0,66,1095	0/0:1,0:1:3.01:0,3,55	0/0:28,0:11:22.21:0,22,345	0/1:28,0:6:16.54:17,0,120	1/1:9,4:16:30.02:622,30,0	1/1:11,0:9:27.08:533,27,0	1/1:7,0:6:15.01:295,15,0	1/1:4,0:3:9.03:198,9,0	1/1:6,0:6:18.06:377,18,0	0/0:22,0:22:66.16:0,66,1015	0/0:14,0:13:33.10:0,33,487	0/0:11,0:11:27.07:0,27,400	0/0:9,0:9:24.08:0,24,418	0/0:11,0:11:30.10:0,30,511	0/0:16,0:16:45.15:0,45,851	0/0:8,0:8:21.07:0,21,310	0/0:27,0:25:63.22:0,63,1179	0/0:21,0:20:60.17:0,60,905	1/1:5,0:5:15.05:320,15,0	1/1:12,0:11:33.11:679,33,0	1/1:6,0:6:12.04:208,12,0	0/0:8,0:8:24.08:0,24,407	1/1:12,0:11:33.11:723,33,0	1/1:6,0:5:6:132,6,0	0/0:19,0:17:48.11:0,48,737	1/1:16,0:16:18.98:684,19,0	1/1:8,0:7:18.04:371,18,0	./.
chr10	90746028	.	A	AGTATGTATGTAT	8107.23	PASS	AB=0.886;AC=39;AF=0.750;AN=52;BaseQRankSum=-1.663;DP=561;FS=24.222;HRun=0;HaplotypeScore=213.2274;InbreedingCoeff=0.6352;MQ=57.10;MQ0=10;MQRankSum=-6.208;QD=19.87;ReadPosRankSum=-3.452;VQSLOD=2.2016;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:41.33:0,41,1186	0/0:10,0:10:21.07:0,21,717	./.	0/0:26,0:16:1.41:0,1,17	1/1:28,0:28:3.01:47,3,0	1/1:12,5:20:0.47:1,0,0	1/1:26,0:27:23.29:645,23,0	1/1:31,0:31:21.07:427,21,0	1/1:13,5:21:11.85:656,12,0	1/1:15,3:19:21.07:940,21,0	./.	1/1:7,3:11:12.04:693,12,0	1/1:8,1:10:9.03:499,9,0	1/1:13,0:18:10.82:464,11,0	0/0:20,0:20:27.09:0,27,921	1/1:11,2:13:6.02:348,6,0	0/0:25,0:26:39.59:0,40,1180	1/1:13,3:17:18.06:984,18,0	1/1:18,3:19:9.03:429,9,0	0/1:17,5:23:0:0,0,0	1/1:8,0:8:4.14:51,4,0	0/1:16,3:19:0:1,0,0	1/1:20,0:21:3.01:58,3,0	0/1:10,0:10:0.18:0,0,0	1/1:19,4:24:2.92:76,3,0	1/1:30,1:32:21.96:744,22,0	1/1:15,9:25:12.51:697,13,0	1/1:3,3:6:6.02:348,6,0
chr10	90746520	.	T	TACCTCCTG	15269.76	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-11.394;DP=602;FS=12.379;HRun=0;HaplotypeScore=146.7753;InbreedingCoeff=0.9896;MQ=85.46;MQ0=0;MQRankSum=-14.982;QD=99.80;ReadPosRankSum=2.563;VQSLOD=5.4523;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:96.28:0,96,2645	0/0:4,0:4:12.04:0,12,363	0/0:30,0:30:80.43:0,80,2241	0/0:19,0:19:57.17:0,57,1391	0/0:30,0:30:87.21:0,87,2278	0/0:23,0:23:60.19:0,60,1605	0/0:27,0:27:75.23:0,75,2014	0/0:28,0:28:81.21:0,81,2062	0/0:17,0:16:48.16:0,48,1389	1/1:0,17:21:57.18:2488,57,0	1/1:0,10:13:24.08:1026,24,0	1/1:0,13:21:36.12:1650,36,0	1/1:0,9:12:24.08:1104,24,0	1/1:0,14:15:42.14:1930,42,0	0/0:22,0:22:63.16:0,63,1767	1/1:1,18:22:54.19:2427,54,0	0/0:28,0:27:81.25:0,81,2216	1/1:0,5:5:12.04:507,12,0	0/0:26,0:26:72.05:0,72,1860	0/0:18,0:18:51.13:0,51,1432	0/0:35,0:35:99:0,105,2988	1/1:2,23:30:69.24:2769,69,0	0/0:18,0:18:54.17:0,54,1550	0/0:23,0:23:60.21:0,60,1730	1/1:0,10:13:30.10:1369,30,0	0/0:25,0:25:69.17:0,69,1789	0/0:28,0:28:84.27:0,84,2371	0/0:15,0:15:42.14:0,42,1271
chr10	90746645	.	C	CG	4063.02	PASS	AB=1.000;AC=29;AF=0.537;AN=54;BaseQRankSum=11.807;DP=425;FS=7.347;HRun=2;HaplotypeScore=77.5901;InbreedingCoeff=0.8267;MQ=46.91;MQ0=8;MQRankSum=-4.586;QD=15.16;ReadPosRankSum=-1.197;VQSLOD=2.5702;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:76.68:0,77,869	0/0:10,0:8:3.40:0,3,51	./.	0/0:7,0:4:5.54:0,6,25	1/1:14,17:29:41.78:420,42,0	1/1:8,6:15:30.47:269,30,0	1/1:8,13:20:25.11:267,25,0	1/1:7,8:16:40.03:392,40,0	1/1:8,8:16:35.60:353,36,0	0/0:26,0:24:47.68:0,48,556	0/0:5,0:5:2.32:0,2,101	0/0:11,0:10:27.05:0,27,305	0/0:5,0:4:12.01:0,12,119	0/0:13,0:13:35.11:0,35,384	1/1:11,0:8:7.12:21,7,0	0/0:6,0:4:12.02:0,12,134	0/1:33,0:31:28.15:28,0,191	0/0:13,0:12:30.84:0,31,333	1/1:11,6:18:39.97:406,40,0	1/1:10,7:17:27.89:229,28,0	1/1:5,3:7:11.88:104,12,0	0/0:16,0:16:31.74:0,32,347	1/1:7,6:13:26.43:247,26,0	1/1:6,9:16:25.26:274,25,0	0/0:11,0:11:30.05:0,30,333	1/1:6,14:21:41.97:485,42,0	1/1:5,14:20:39.03:437,39,0	1/1:2,4:6:11.93:129,12,0
chr10	90746647	.	G	GA	1703.21	PASS	AB=0.912;AC=23;AF=0.426;AN=54;BaseQRankSum=4.376;DP=431;FS=8.176;HRun=12;HaplotypeScore=89.2024;InbreedingCoeff=-0.1221;MQ=47.52;MQ0=7;MQRankSum=-5.199;QD=5.22;ReadPosRankSum=2.214;VQSLOD=1.8861;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:31:42.35:0,42,473	0/1:4,5:9:7.07:77,0,7	./.	0/0:8,0:5:8.42:0,8,49	0/1:28,0:26:33.08:102,0,33	0/1:14,0:14:45.12:54,0,45	0/1:21,0:19:27.79:64,0,28	0/1:18,0:18:36.63:121,0,37	0/1:18,0:17:28.15:84,0,28	0/1:20,3:22:12.23:12,0,241	0/1:3,1:4:17.20:17,0,54	0/0:11,0:10:20.86:0,21,153	0/0:6,0:6:7.93:0,8,47	0/0:14,0:14:29.80:0,30,217	1/1:1,11:9:15:138,15,0	0/0:7,0:5:8.81:0,9,60	0/1:12,22:32:14.32:486,0,14	0/0:12,0:11:8.72:0,9,176	0/1:19,0:19:13.71:112,0,14	0/1:19,0:17:9.07:45,0,9	1/1:9,0:7:3.44:21,3,0	0/1:15,2:17:4.46:4,0,130	0/1:14,0:14:24.49:43,0,24	0/1:15,0:15:10.06:82,0,10	0/0:10,0:10:20.87:0,21,153	1/1:20,0:20:11.96:174,12,0	1/1:22,0:22:30.71:185,31,0	0/1:6,0:7:4.94:49,0,5
chr10	90746664	.	C	CA	4932.61	PASS	AB=0.593;AC=25;AF=0.446;AN=56;BaseQRankSum=4.054;DP=466;FS=2.418;HRun=8;HaplotypeScore=75.1136;InbreedingCoeff=0.9192;MQ=60.69;MQ0=2;MQRankSum=-5.333;QD=21.26;ReadPosRankSum=-0.267;VQSLOD=5.0522;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:90.03:0,90,823	0/0:11,0:10:20.99:0,21,192	0/0:15,0:10:20.97:0,21,186	0/0:13,0:10:17.42:0,17,129	1/1:6,22:27:54.12:607,54,0	1/1:1,13:14:39.12:450,39,0	1/1:5,11:15:30.09:346,30,0	1/1:9,11:20:33.10:381,33,0	1/1:2,13:14:30.09:345,30,0	0/0:21,0:21:51:0,51,463	0/0:9,0:9:24.01:0,24,219	0/0:12,0:11:27.01:0,27,246	0/0:9,0:8:20.49:0,20,169	0/0:13,0:13:33:0,33,297	0/0:16,0:13:20.90:0,21,178	0/0:9,0:8:17.92:0,18,152	0/0:32,0:29:69.03:0,69,630	0/0:13,0:12:33.02:0,33,302	1/1:5,19:24:2.23:521,2,0	1/1:7,12:18:33.10:381,33,0	1/1:1,5:5:9.03:104,9,0	0/0:17,0:17:33.01:0,33,298	1/1:5,7:13:17.89:188,18,0	0/1:5,11:16:0.37:250,0,0	0/0:8,0:8:24.01:0,24,219	1/1:4,24:28:66.18:749,66,0	1/1:5,18:23:39.11:450,39,0	1/1:5,4:10:18.46:163,18,0
chr10	90746877	.	C	CA	2145.84	PASS	AB=0.941;AC=39;AF=0.696;AN=56;BaseQRankSum=-1.790;DP=570;FS=11.117;HRun=12;HaplotypeScore=99.0812;InbreedingCoeff=0.3364;MQ=56.27;MQ0=21;MQRankSum=0.743;QD=4.66;ReadPosRankSum=-1.923;VQSLOD=0.6271;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:56.98:0,57,610	1/1:5,0:6:12.89:76,13,0	0/1:53,0:13:14.25:14,0,29	0/1:69,0:17:26.90:27,0,27	0/1:17,0:15:0.45:2,0,0	1/1:17,0:16:5.26:28,5,0	1/1:14,0:14:7.67:31,8,0	0/0:13,0:10:4.50:0,5,11	0/0:12,0:12:4.94:0,5,19	1/1:15,5:20:40.13:337,40,0	1/1:12,7:19:19.95:230,20,0	1/1:17,2:18:16.08:260,16,0	1/1:2,7:9:2.26:51,2,0	1/1:12,2:14:17.77:146,18,0	1/1:12,0:12:16.66:82,17,0	1/1:11,5:18:18.76:254,19,0	0/1:9,1:19:4.38:63,0,4	1/1:11,6:17:7.34:260,7,0	1/1:18,0:17:2.56:22,3,0	1/1:23,0:23:4.01:13,4,0	1/1:12,0:11:5.61:35,6,0	1/1:5,13:17:23.91:210,24,0	0/0:18,0:17:7.27:0,7,18	0/1:20,0:18:3.21:11,0,3	1/1:7,2:10:4.18:104,4,0	0/1:21,1:21:0.68:31,0,1	0/0:18,0:18:8.82:0,9,25	0/1:10,0:10:3.37:16,0,3
chr10	90746882	.	AAAAAAAAC	A	3810.63	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=-0.449;DP=588;FS=1.530;HRun=0;HaplotypeScore=135.0587;InbreedingCoeff=0.6507;MQ=53.98;MQ0=27;MQRankSum=-2.442;QD=11.05;ReadPosRankSum=-2.225;VQSLOD=2.4890;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:50:99:0,132,3831	0/0:8,0:7:16.22:0,16,303	0/1:65,0:11:1.76:2,0,127	0/1:78,0:16:9.86:10,0,168	1/1:15,0:12:26.96:326,27,0	1/1:16,0:15:30.01:329,30,0	0/1:15,0:15:17.15:319,0,17	1/1:14,1:12:15.06:249,15,0	1/1:11,0:11:18.06:401,18,0	0/0:25,0:23:56.40:0,56,1080	0/0:20,0:20:22.97:0,23,722	0/0:18,0:17:17.36:0,17,916	0/0:9,0:9:13.85:0,14,238	0/0:15,0:15:23.94:0,24,557	0/0:15,0:14:18.34:0,18,419	0/0:17,0:17:39.08:0,39,981	0/0:19,0:18:17.96:0,18,429	0/0:17,0:17:23.79:0,24,956	0/1:16,0:15:39.60:168,0,40	1/1:3,20:23:41.74:366,42,0	1/1:10,0:9:16.54:204,17,0	0/0:18,0:17:13.47:0,13,642	1/1:8,8:15:20.60:280,21,0	1/1:19,0:17:14.58:257,15,0	0/0:10,0:10:20.19:0,20,447	0/1:21,0:20:59.62:324,0,60	1/1:15,0:15:14.71:318,15,0	1/1:10,0:10:21.85:258,22,0
chr10	90746888	.	AAC	A	4125.58	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=1.168;DP=623;FS=16.062;HRun=0;HaplotypeScore=102.2532;InbreedingCoeff=0.1270;MQ=52.69;MQ0=26;MQRankSum=-3.089;QD=8.11;ReadPosRankSum=-6.316;VQSLOD=0.5498;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:47:99:0,130,1380	0/1:8,0:7:5.87:28,0,6	0/1:68,0:9:17.79:18,0,29	0/1:80,0:21:20.69:21,0,46	1/1:24,0:21:47.87:418,48,0	1/1:17,0:16:44.97:399,45,0	1/1:16,0:16:29.36:319,29,0	1/1:17,1:15:35.96:328,36,0	1/1:7,8:15:18.05:202,18,0	0/0:23,0:21:2.04:0,2,181	0/1:18,0:18:21.92:71,0,22	0/1:17,0:16:19.74:20,0,138	0/1:10,0:10:11.62:12,0,15	0/1:13,0:13:6.74:7,0,54	0/0:16,0:15:0.18:0,0,31	0/0:16,0:16:2.16:0,2,97	0/1:20,0:19:44.59:45,0,80	0/1:20,0:20:62.45:62,0,118	1/1:13,0:12:12.34:217,12,0	1/1:23,0:23:47.63:355,48,0	1/1:16,0:15:28.29:237,28,0	0/1:17,0:16:2.23:2,0,73	1/1:14,1:14:20.87:207,21,0	1/1:19,0:17:17.47:157,17,0	0/0:10,0:10:1.28:0,1,74	1/1:29,0:28:52.44:476,52,0	1/1:4,12:16:15.04:173,15,0	1/1:17,0:17:42.37:354,42,0
chr10	90746889	.	AC	A	4290.75	PASS	AB=0.992;AC=43;AF=0.768;AN=56;BaseQRankSum=4.370;DP=616;FS=6.015;HRun=1;HaplotypeScore=95.8079;InbreedingCoeff=-0.0953;MQ=52.90;MQ0=26;MQRankSum=-1.650;QD=7.57;ReadPosRankSum=-2.416;VQSLOD=1.1253;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:99:0,122,1040	1/1:5,0:7:0.43:52,0,0	0/1:64,3:9:15.35:15,0,22	0/1:76,4:21:4.82:30,0,5	1/1:22,2:21:47.82:388,48,0	1/1:16,1:16:44.99:395,45,0	1/1:14,2:16:31.20:277,31,0	1/1:17,2:16:38.93:330,39,0	1/1:9,5:14:18:159,18,0	0/1:24,0:22:46.95:56,0,47	1/1:16,0:17:29.45:176,29,0	0/1:17,0:16:26.11:26,0,52	1/1:11,0:11:0.68:19,1,0	0/1:13,0:13:4.51:21,0,5	0/1:14,0:13:8.30:38,0,8	0/1:16,0:16:11.14:40,0,11	0/1:20,0:19:30.76:63,0,31	0/1:19,0:20:22.61:99,0,23	1/1:10,1:10:15.33:241,15,0	1/1:21,2:23:47.61:340,48,0	1/1:14,1:14:26.92:221,27,0	0/1:17,0:16:5.72:37,0,6	1/1:12,3:14:20.60:175,21,0	1/1:14,4:16:17.72:141,18,0	0/1:10,0:10:15.80:16,0,23	1/1:6,23:28:58.61:464,59,0	1/1:12,4:16:15:132,15,0	1/1:14,2:16:42.35:341,42,0
chr10	90746890	.	C	CA	1996.27	PASS	AB=0.990;AC=38;AF=0.679;AN=56;BaseQRankSum=-2.011;DP=623;FS=6.604;HRun=12;HaplotypeScore=109.2447;InbreedingCoeff=0.2962;MQ=54.62;MQ0=26;MQRankSum=1.584;QD=3.90;ReadPosRankSum=-3.625;VQSLOD=0.5450;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:48,2:49:49.45:0,49,572	1/1:6,3:8:5.29:83,5,0	0/1:66,0:10:15.96:16,0,17	0/1:81,0:23:18.41:18,0,21	0/1:23,0:20:0.36:0,0,2	0/1:17,0:16:0.99:11,0,1	1/1:16,0:16:8.15:32,8,0	0/1:19,0:16:4.57:18,0,5	0/0:14,0:14:6.85:0,7,24	1/1:11,12:23:18.28:294,18,0	1/1:17,0:17:23.87:234,24,0	1/1:14,2:15:17.68:127,18,0	0/1:10,1:11:8.33:45,0,8	1/1:11,1:13:16.47:131,16,0	1/1:4,10:13:1.66:80,2,0	1/1:12,5:17:27.02:248,27,0	1/1:15,5:19:18.43:157,18,0	1/1:13,7:20:17.36:275,17,0	1/1:12,0:11:2.16:21,2,0	1/1:23,0:23:2.12:9,2,0	1/1:16,0:15:3.36:12,3,0	1/1:12,3:15:21.49:157,21,0	0/0:15,0:14:8.33:0,8,23	0/1:20,0:18:2.32:16,0,2	1/1:9,1:10:13.58:148,14,0	0/1:29,0:28:5.40:21,0,5	0/0:16,0:16:9.97:0,10,27	0/0:15,0:15:0.92:0,1,6
chr10	90746895	.	AAAAAAAAC	A	3226.07	PASS	AB=0.971;AC=22;AF=0.393;AN=56;BaseQRankSum=3.302;DP=613;FS=30.136;HRun=0;HaplotypeScore=151.4682;InbreedingCoeff=0.6805;MQ=58.36;MQ0=24;MQRankSum=-3.076;QD=15.51;ReadPosRankSum=2.904;VQSLOD=1.4073;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:51:99:0,135,4767	0/0:8,0:7:21.07:0,21,454	0/0:74,0:14:30.81:0,31,329	0/0:83,0:25:45.84:0,46,504	1/1:17,0:15:28.33:331,28,0	1/1:11,0:10:26.97:278,27,0	0/1:14,0:14:37.68:292,0,38	0/1:13,2:12:71.29:196,0,71	1/1:11,2:13:18.06:377,18,0	0/0:27,0:25:67.99:0,68,1745	0/0:18,0:18:42.58:0,43,1114	0/0:16,0:15:39.12:0,39,1112	0/0:12,0:12:24.07:0,24,466	0/0:13,0:13:27.07:0,27,796	0/0:15,0:14:21.54:0,22,524	0/0:18,0:18:45.15:0,45,1390	0/0:21,0:20:36.04:0,36,737	0/0:21,0:21:55.05:0,55,1554	0/1:12,0:11:45.18:152,0,45	1/1:23,1:24:13.16:176,13,0	1/1:12,1:13:18.74:226,19,0	0/0:16,0:15:33.11:0,33,897	1/1:15,1:15:17.34:229,17,0	1/1:15,0:13:10.36:229,10,0	0/0:10,0:10:24.08:0,24,772	0/1:29,0:28:88.92:420,0,89	1/1:17,1:18:14.26:298,14,0	1/1:10,1:11:19.77:231,20,0
chr10	90746896	.	AAAAAAAC	A	3022.78	PASS	AB=0.952;AC=22;AF=0.393;AN=56;BaseQRankSum=3.584;DP=611;FS=34.354;HRun=0;HaplotypeScore=144.9877;InbreedingCoeff=0.6832;MQ=59.50;MQ0=21;MQRankSum=-3.205;QD=14.60;ReadPosRankSum=2.400;VQSLOD=1.5920;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:51:99:0,135,4293	0/0:8,0:7:21.07:0,21,446	0/0:70,0:14:17.25:0,17,270	0/0:84,0:26:39.13:0,39,467	1/1:16,2:16:32.89:316,33,0	1/1:11,0:10:26.37:271,26,0	0/1:12,2:14:38.04:198,0,38	0/1:16,0:13:34.11:186,0,34	1/1:12,1:13:18.06:325,18,0	0/0:28,0:26:69.19:0,69,1687	0/0:18,0:18:42.58:0,43,992	0/0:16,0:15:39.13:0,39,980	0/0:12,0:12:24.07:0,24,422	0/0:13,0:13:27.07:0,27,708	0/0:15,0:14:21.54:0,22,479	0/0:18,0:18:45.15:0,45,1226	0/0:21,0:20:36.03:0,36,658	0/0:22,0:22:57.17:0,57,1458	0/1:12,0:11:59.36:220,0,59	1/1:23,1:24:13.73:168,14,0	1/1:13,0:13:22.51:227,23,0	0/0:16,0:15:33.11:0,33,795	1/1:14,1:15:17.20:209,17,0	1/1:13,3:14:12.32:188,12,0	0/0:10,0:10:24.08:0,24,723	0/1:25,2:26:44.01:413,0,44	1/1:16,2:18:14.16:276,14,0	1/1:9,1:10:24.48:238,24,0
chr10	90746897	.	AAAAAAC	A	2987.50	PASS	AB=0.976;AC=23;AF=0.411;AN=56;BaseQRankSum=3.027;DP=609;FS=32.980;HRun=0;HaplotypeScore=138.1341;InbreedingCoeff=0.7688;MQ=59.66;MQ0=20;MQRankSum=-3.165;QD=14.36;ReadPosRankSum=2.109;VQSLOD=1.5781;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:99:0,132,3661	0/0:10,0:9:27.07:0,27,477	0/0:70,0:14:19.97:0,20,265	0/0:82,0:26:37.60:0,38,393	1/1:19,0:17:36.52:329,37,0	1/1:9,1:10:26.99:260,27,0	0/1:14,0:14:21.50:153,0,21	1/1:17,0:14:19:268,19,0	1/1:12,0:12:18.06:305,18,0	0/0:27,0:25:69.18:0,69,1492	0/0:17,0:17:42.11:0,42,853	0/0:16,0:15:39.12:0,39,801	0/0:12,0:12:24.07:0,24,378	0/0:13,0:13:27.07:0,27,609	0/0:15,0:14:21.54:0,22,405	0/0:18,0:18:45.15:0,45,1064	0/0:21,0:20:39.02:0,39,614	0/0:21,0:22:57.16:0,57,1292	0/1:12,1:12:62.44:208,0,62	1/1:25,0:25:16.95:179,17,0	1/1:13,0:13:22.51:219,23,0	0/0:16,0:15:33.11:0,33,649	1/1:14,1:15:17.43:182,17,0	1/1:17,0:15:17.77:206,18,0	0/0:11,0:11:27.08:0,27,670	0/1:26,0:25:28.51:386,0,29	1/1:16,1:17:17.94:278,18,0	1/1:10,0:10:22.33:232,22,0
chr10	90747674	.	A	ATG	8369.60	PASS	AB=0.791;AC=27;AF=0.482;AN=56;BaseQRankSum=-9.085;DP=710;FS=1.673;HRun=0;HaplotypeScore=104.4144;InbreedingCoeff=0.3795;MQ=59.95;MQ0=4;MQRankSum=-0.128;QD=18.27;ReadPosRankSum=-0.217;VQSLOD=4.9068;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:67.34:0,67,694	1/1:2,9:10:18.06:279,18,0	0/0:29,0:16:14.99:0,15,153	0/0:32,0:14:6.97:0,7,146	1/1:7,12:19:42.14:643,42,0	0/1:17,7:24:62.54:255,0,63	0/1:18,12:30:2.53:647,0,3	1/1:18,7:25:43.65:588,44,0	1/1:26,17:43:67.33:1137,67,0	0/0:32,0:34:37.01:0,37,566	0/0:12,0:12:33.09:0,33,378	0/1:23,0:23:6.32:6,0,526	0/0:25,0:26:62.86:0,63,672	0/1:20,1:23:10.61:11,0,300	1/1:11,18:29:1.62:477,2,0	0/0:23,0:25:56.99:0,57,635	0/1:17,19:37:94.23:594,0,94	0/0:17,0:20:28.96:0,29,362	1/1:22,6:28:12.83:464,13,0	0/1:11,6:17:4.41:363,0,4	0/1:41,13:54:34.93:781,0,35	0/0:18,0:18:33.08:0,33,369	1/1:3,7:10:15.05:232,15,0	1/1:17,15:32:16.66:686,17,0	0/0:20,0:20:38.98:0,39,437	0/1:12,6:18:8.06:285,0,8	0/1:15,9:25:14.72:641,0,15	1/1:1,7:9:18.06:279,18,0
chr10	90747770	.	A	ATG	11544.82	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-15.740;DP=784;FS=3.670;HRun=0;HaplotypeScore=98.7607;InbreedingCoeff=0.9956;MQ=56.56;MQ0=18;MQRankSum=5.430;QD=32.16;ReadPosRankSum=1.383;VQSLOD=6.7307;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:84.35:0,84,1036	0/0:9,0:9:23.86:0,24,289	0/0:41,0:15:26.99:0,27,308	0/0:38,0:17:32.13:0,32,371	1/1:1,22:22:47.51:802,48,0	1/1:1,23:24:39.13:652,39,0	1/1:5,21:27:39.13:651,39,0	1/1:11,29:40:78.20:1213,78,0	1/1:3,25:28:66.21:1077,66,0	0/0:22,0:22:57.18:0,57,726	0/0:23,0:23:60.19:0,60,762	0/0:25,0:25:62.53:0,63,800	0/0:24,0:24:51.16:0,51,648	0/0:27,0:27:63.20:0,63,802	0/0:36,0:36:93.30:0,93,1182	0/0:25,0:25:57.15:0,57,696	0/0:36,0:35:87.26:0,87,1089	0/0:33,0:33:79.07:0,79,994	1/1:5,12:16:35.68:505,36,0	1/1:5,24:30:59.96:1004,60,0	1/1:8,39:46:99:1656,99,0	0/0:29,0:29:66.21:0,66,839	1/1:1,23:24:57.67:955,58,0	1/1:5,31:36:72.25:1204,72,0	0/0:13,0:13:27.08:0,27,331	1/1:5,17:21:12.96:725,13,0	1/1:6,23:28:42.14:702,42,0	1/1:0,12:12:24.08:401,24,0
chr10	90747927	.	A	AT	1568.54	PASS	AB=0.762;AC=23;AF=0.411;AN=56;BaseQRankSum=-5.393;DP=420;FS=0.526;HRun=15;HaplotypeScore=56.3336;InbreedingCoeff=0.4173;MQ=74.95;MQ0=7;MQRankSum=-0.199;QD=6.08;ReadPosRankSum=-2.117;VQSLOD=1.7225;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,5:34:17.70:18,0,244	0/0:1,0:6:8.11:0,8,23	0/0:22,0:15:11.34:0,11,70	0/1:20,0:14:3.26:3,0,15	1/1:10,1:11:7.89:72,8,0	1/1:9,6:15:11.12:114,11,0	0/1:12,6:17:6.06:57,0,6	1/1:12,15:28:44.72:355,45,0	0/1:5,4:9:6.10:54,0,6	0/0:11,0:15:26.62:0,27,143	0/0:6,0:9:17.85:0,18,89	0/0:9,0:10:10.74:0,11,59	0/0:12,0:13:11.85:0,12,71	0/0:11,0:11:11.71:0,12,71	0/0:3,0:14:16.24:0,16,47	0/0:10,0:11:13.74:0,14,78	0/0:11,0:18:16.20:0,16,46	0/0:10,0:11:13.61:0,14,75	0/1:16,4:22:13.03:133,0,13	1/1:6,6:13:2.07:142,2,0	1/1:4,9:13:5.96:159,6,0	0/0:5,0:5:2.93:0,3,18	1/1:9,8:17:11.99:101,12,0	0/1:3,6:9:2.34:86,0,2	0/0:16,0:16:23.38:0,23,143	1/1:6,7:17:35.47:264,35,0	1/1:7,10:17:2.94:124,3,0	0/1:4,5:10:33.22:69,0,33
chr10	90748039	.	A	ATT	891.86	PASS	AB=0.971;AC=11;AF=0.204;AN=54;BaseQRankSum=5.110;DP=351;FS=9.556;HRun=13;HaplotypeScore=62.3431;InbreedingCoeff=0.5066;MQ=59.76;MQ0=1;MQRankSum=-2.373;QD=8.92;ReadPosRankSum=-2.789;VQSLOD=0.2140;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:23.67:0,24,211	1/1:3,2:5:6.02:82,6,0	0/1:9,0:3:0:0,0,0	0/1:4,0:2:0:0,0,0	0/0:21,0:23:29.32:0,29,293	0/0:18,0:18:23.80:0,24,211	0/0:7,0:8:17.69:0,18,139	0/0:22,0:25:26.46:0,26,326	0/1:9,0:10:5.81:6,0,76	0/0:5,0:8:5.22:0,5,68	0/0:4,0:5:14.74:0,15,117	0/0:5,0:5:5.81:0,6,53	./.	0/0:6,0:6:5.92:0,6,53	1/1:10,5:16:33.02:393,33,0	0/0:5,0:5:5.97:0,6,53	1/1:16,11:30:47.51:538,48,0	0/0:16,0:17:23.24:0,23,241	0/0:15,0:16:20.74:0,21,222	0/1:18,0:19:1.04:1,0,146	0/0:6,0:6:11.99:0,12,106	0/1:4,0:6:10.74:11,0,74	0/0:10,0:12:11.49:0,11,135	0/0:21,0:21:29.77:0,30,264	0/0:4,0:4:9:0,9,79	0/0:26,0:29:61.98:0,62,506	0/0:17,0:17:11.77:0,12,105	0/0:4,0:5:11.71:0,12,91
chr10	90748092	.	G	GGT	1299.48	PASS	AB=0.604;AC=27;AF=0.482;AN=56;BaseQRankSum=3.633;DP=427;FS=44.557;HRun=0;HaplotypeScore=85.8686;InbreedingCoeff=-0.4381;MQ=61.23;MQ0=8;MQRankSum=-0.750;QD=3.91;ReadPosRankSum=4.643;VQSLOD=-0.0099;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:20:44.86:0,45,600	0/1:1,0:5:15.43:15,0,23	0/0:36,0:12:23.08:0,23,205	0/0:30,0:12:25.26:0,25,176	0/1:11,0:28:99:155,0,127	0/1:7,0:19:46.03:46,0,98	0/1:5,0:9:34.17:34,0,68	0/1:12,1:22:99:104,0,152	0/1:5,0:10:25.50:25,0,54	0/1:7,0:12:47.22:47,0,81	0/1:6,1:11:29.06:92,0,29	1/1:0,1:4:5.72:37,6,0	1/1:0,0:1:2.80:13,3,0	0/1:1,0:5:2.83:32,0,3	0/1:4,1:16:19.72:96,0,20	0/1:0,0:6:0.16:32,0,0	0/1:10,0:26:61.81:62,0,110	0/1:4,0:9:11.52:12,0,57	0/1:7,0:16:60.89:61,0,111	0/1:1,0:17:0.39:172,0,0	0/0:5,0:7:5.95:0,6,43	1/1:5,0:10:11.97:99,12,0	0/1:2,0:18:19.17:55,0,19	0/1:3,0:14:59.41:59,0,60	0/1:4,0:11:13.17:73,0,13	0/1:9,0:30:97.37:97,0,206	0/1:4,0:14:5.97:6,0,36	0/1:4,0:10:29.33:29,0,55
chr10	90749676	.	C	CA	1159.93	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-0.071;DP=456;FS=2.955;HRun=8;HaplotypeScore=99.4479;InbreedingCoeff=0.9433;MQ=67.27;MQ0=3;MQRankSum=-0.171;QD=26.98;ReadPosRankSum=1.005;VQSLOD=3.6617;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.02:0,60,544	1/1:0,4:4:12.04:138,12,0	0/0:26,0:17:20.07:0,20,239	0/0:20,0:17:29.95:0,30,266	0/0:16,0:16:41.99:0,42,374	0/0:14,0:13:36.01:0,36,325	0/0:16,0:16:42.01:0,42,379	0/0:25,0:24:60.01:0,60,542	0/0:21,0:20:38.98:0,39,352	0/0:15,0:15:33.02:0,33,302	0/0:12,0:12:35.96:0,36,317	0/0:10,0:10:20.90:0,21,213	0/0:11,0:9:24.01:0,24,220	0/0:6,0:6:12.01:0,12,110	1/1:5,11:16:39.07:433,39,0	0/0:21,0:21:48:0,48,435	1/1:4,19:23:64.43:728,64,0	0/0:33,0:33:75.02:0,75,685	0/0:23,0:22:50.97:0,51,458	0/0:18,0:18:51.02:0,51,466	0/0:17,0:17:30:0,30,274	0/0:4,0:4:11.99:0,12,106	0/0:5,0:5:15.01:0,15,137	0/0:18,0:18:19.17:0,19,310	0/0:9,0:8:12:0,12,110	0/0:17,0:17:42.02:0,42,384	0/0:23,0:22:50.99:0,51,462	0/0:9,0:8:21.01:0,21,192
chr10	90749707	.	C	CA	3611.96	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=-2.717;DP=475;FS=0.402;HRun=5;HaplotypeScore=122.7717;InbreedingCoeff=0.8574;MQ=49.59;MQ0=13;MQRankSum=-0.420;QD=16.42;ReadPosRankSum=-1.950;VQSLOD=2.2818;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:24:47.71:0,48,659	1/1:4,3:7:18.06:238,18,0	0/1:22,0:6:1.02:1,0,88	0/0:14,0:6:5.43:0,5,51	0/0:12,0:12:6.02:0,6,19	0/0:15,0:14:15.88:0,16,42	0/0:11,0:11:15.01:0,15,46	0/0:21,0:15:11.60:0,12,39	0/0:22,0:20:23.68:0,24,60	1/1:16,0:16:20.05:207,20,0	1/1:19,1:20:48.23:357,48,0	1/1:11,0:11:20.13:122,20,0	1/1:8,2:8:17.06:139,17,0	1/1:13,0:14:20.88:170,21,0	1/1:10,8:18:48.13:614,48,0	1/1:24,1:26:40.11:288,40,0	1/1:13,10:23:33.33:747,33,0	1/1:31,0:31:33.85:363,34,0	0/0:22,0:19:24.40:0,24,72	0/0:19,0:19:1.27:0,1,34	0/0:14,0:14:15.20:0,15,38	1/1:6,0:6:14.67:117,15,0	0/0:7,0:6:6.52:0,7,17	0/0:16,0:16:17.10:0,17,44	1/1:15,0:15:34.98:247,35,0	0/0:21,0:21:25.55:0,26,69	0/0:24,0:23:25.72:0,26,83	0/0:10,0:9:8.64:0,9,21
chr10	90749710	.	AAC	A	4566.72	PASS	AB=0.955;AC=42;AF=0.750;AN=56;BaseQRankSum=-2.913;DP=474;FS=8.795;HRun=0;HaplotypeScore=124.6777;InbreedingCoeff=0.5542;MQ=48.04;MQ0=14;MQRankSum=3.603;QD=11.99;ReadPosRankSum=-1.259;VQSLOD=4.1298;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:24:62.24:0,62,1073	0/0:7,0:7:18.40:0,18,130	0/0:22,0:6:2.17:0,2,116	0/0:14,1:4:8.51:0,9,79	1/1:11,1:12:31.17:174,31,0	1/1:16,0:14:34.75:250,35,0	1/1:11,0:11:16.19:164,16,0	1/1:19,0:14:28.74:299,29,0	1/1:22,0:20:54.63:409,55,0	0/1:16,0:16:13.34:72,0,13	1/1:19,2:21:29.75:159,30,0	1/1:10,0:10:14.45:92,14,0	1/1:10,0:8:7.66:62,8,0	1/1:15,0:15:8.22:40,8,0	0/1:14,4:18:22.25:22,0,179	1/1:25,0:25:7.21:87,7,0	0/0:21,1:22:15.44:0,15,307	0/1:29,0:29:2.23:192,0,2	1/1:20,0:18:34.75:262,35,0	1/1:20,0:20:54.98:438,55,0	1/1:14,0:14:32.28:273,32,0	0/1:5,0:5:2.23:29,0,2	1/1:7,0:6:17.38:125,17,0	1/1:14,0:15:37.38:293,37,0	1/1:17,0:16:3.71:63,4,0	1/1:24,0:22:41.33:366,41,0	1/1:25,0:24:54.86:522,55,0	1/1:10,0:9:22.17:174,22,0
chr10	90749711	.	AC	A	8724.60	PASS	AB=0.938;AC=46;AF=0.821;AN=56;BaseQRankSum=-1.651;DP=466;FS=9.232;HRun=1;HaplotypeScore=102.4849;InbreedingCoeff=0.7632;MQ=46.59;MQ0=15;MQRankSum=1.396;QD=22.43;ReadPosRankSum=0.261;VQSLOD=4.0112;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:25:60.50:0,60,872	0/0:7,0:7:16.08:0,16,78	0/0:20,0:4:6.50:0,7,104	0/1:12,2:4:0.98:1,0,41	1/1:1,11:12:32.98:392,33,0	1/1:5,10:13:36.12:500,36,0	1/1:3,7:10:14.48:359,14,0	1/1:8,12:15:34.30:390,34,0	1/1:3,19:20:57.19:785,57,0	1/1:16,0:16:17.70:161,18,0	1/1:21,0:21:56.79:344,57,0	1/1:10,0:10:24.90:143,25,0	1/1:9,1:8:17.64:107,18,0	1/1:14,0:14:24.12:116,24,0	0/1:18,0:18:25.27:25,0,76	1/1:24,0:24:43.25:269,43,0	0/0:22,0:22:14.09:0,14,160	1/1:29,0:29:54.54:366,55,0	1/1:4,16:18:53.74:683,54,0	1/1:7,14:20:59.66:756,60,0	1/1:5,8:13:33.08:436,33,0	1/1:4,1:5:8.99:50,9,0	1/1:3,4:6:18.05:235,18,0	1/1:3,11:14:39.12:522,39,0	1/1:17,0:16:30.54:179,31,0	1/1:8,14:20:55.38:709,55,0	1/1:3,22:24:68.87:891,69,0	1/1:4,6:9:24.06:303,24,0
chr10	90749719	.	CA	C	6897.34	PASS	AB=0.970;AC=51;AF=0.911;AN=56;BaseQRankSum=2.600;DP=484;FS=0.000;HRun=9;HaplotypeScore=111.2537;InbreedingCoeff=0.4575;MQ=51.67;MQ0=16;MQRankSum=0.303;QD=15.13;ReadPosRankSum=1.326;VQSLOD=4.5702;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:25:57.17:0,57,655	1/1:4,3:7:18.01:163,18,0	0/1:22,0:4:4.78:5,0,19	0/1:23,0:9:5.07:5,0,41	1/1:4,7:11:17.98:158,18,0	1/1:10,9:16:36.01:327,36,0	1/1:7,7:14:33.01:299,33,0	1/1:4,22:21:47.92:419,48,0	1/1:8,15:21:45.02:407,45,0	1/1:13,1:14:9.43:159,9,0	1/1:18,5:23:32.67:336,33,0	1/1:8,2:10:16.23:91,16,0	1/1:4,4:6:11.85:74,12,0	1/1:12,2:14:12.55:118,13,0	1/1:7,6:13:33.01:299,33,0	1/1:21,2:23:18.04:189,18,0	1/1:10,9:19:48.02:436,48,0	0/1:27,3:30:8.31:353,0,8	1/1:9,14:20:51.01:463,51,0	1/1:5,15:19:53.08:456,53,0	1/1:4,9:13:30.01:275,30,0	1/1:5,0:5:11.67:55,12,0	1/1:3,4:6:11.64:109,12,0	1/1:7,8:15:27:242,27,0	1/1:16,1:16:34.50:213,35,0	1/1:8,13:20:53.74:467,54,0	1/1:3,23:25:68.96:617,69,0	1/1:2,6:7:18.01:164,18,0
chr10	90749720	.	A	AC	3090.95	PASS	AB=0.942;AC=24;AF=0.429;AN=56;BaseQRankSum=-3.930;DP=485;FS=9.739;HRun=1;HaplotypeScore=124.1316;InbreedingCoeff=0.4738;MQ=51.45;MQ0=17;MQRankSum=-3.173;QD=12.22;ReadPosRankSum=-3.587;VQSLOD=0.5377;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:25:69.13:0,69,883	0/0:6,0:6:16.61:0,17,80	0/0:23,0:4:6.44:0,6,53	0/0:25,0:9:5.16:0,5,74	0/1:11,0:11:3.09:3,0,63	0/1:19,0:16:29.85:30,0,63	0/1:14,0:14:2.83:3,0,48	1/1:26,0:21:21.22:89,21,0	0/0:22,0:20:22.33:0,22,108	1/1:5,9:14:16.54:326,17,0	1/1:13,10:23:49.23:513,49,0	1/1:7,4:11:7.40:198,7,0	1/1:8,1:7:1.12:147,1,0	1/1:8,6:14:10.14:281,10,0	0/0:13,0:13:33.40:0,33,163	1/1:5,16:22:26.68:438,27,0	0/0:19,0:19:50.22:0,50,248	0/1:14,16:30:6.77:626,0,7	0/1:23,0:20:23.90:24,0,83	0/0:21,0:20:7.38:0,7,74	0/1:14,0:14:10.06:10,0,14	1/1:3,3:6:10.93:161,11,0	0/0:6,0:5:3.86:0,4,13	0/0:15,0:15:17.54:0,18,99	1/1:4,12:16:32.84:431,33,0	0/0:22,0:20:17.27:0,17,102	0/0:26,0:25:10.09:0,10,72	0/0:6,0:6:1.40:0,1,13
chr10	90749777	.	AAAGGAAGG	A	4312.01	PASS	AB=0.885;AC=22;AF=0.393;AN=56;BaseQRankSum=-5.472;DP=399;FS=4.465;HRun=0;HaplotypeScore=152.0138;InbreedingCoeff=0.7843;MQ=59.52;MQ0=1;MQRankSum=-5.570;QD=28.75;ReadPosRankSum=1.858;VQSLOD=4.6767;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:51.16:0,51,1668	0/1:4,0:5:4.62:50,0,5	0/0:16,0:14:2.84:0,3,14	0/0:11,0:8:9.03:0,9,121	0/0:20,0:20:33.17:0,33,398	0/0:16,0:16:26.58:0,27,181	0/0:24,0:24:17.77:0,18,144	0/0:13,0:12:8.99:0,9,114	0/0:16,0:16:20.23:0,20,146	1/1:11,5:16:27.09:634,27,0	1/1:10,11:21:33.10:753,33,0	1/1:1,6:7:12.04:305,12,0	1/1:2,3:5:9.03:226,9,0	1/1:7,3:10:12.04:281,12,0	1/1:6,0:14:12.04:224,12,0	1/1:13,4:17:24.08:550,24,0	0/1:14,0:15:4.21:107,0,4	1/1:16,2:18:18.03:361,18,0	0/0:22,0:21:26.83:0,27,232	0/0:13,0:13:17.68:0,18,130	0/0:13,0:13:11.95:0,12,135	1/1:1,7:8:18:341,18,0	0/0:8,0:7:11.84:0,12,84	0/0:15,0:15:23.91:0,24,183	1/1:8,6:14:21.07:480,21,0	0/0:18,0:18:5.96:0,6,194	0/0:17,0:17:23.45:0,23,220	0/0:3,0:3:6.01:0,6,67
chr10	90749808	.	GGAAGA	G	6719.07	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=4.744;DP=391;FS=12.291;HRun=0;HaplotypeScore=93.5484;InbreedingCoeff=0.4120;MQ=61.78;MQ0=1;MQRankSum=-1.572;QD=22.62;ReadPosRankSum=5.656;VQSLOD=3.1024;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.04:0,57,1390	0/0:5,0:5:4.95:0,5,158	0/0:18,0:14:17.89:0,18,448	0/0:14,0:10:9.51:0,10,275	1/1:1,21:22:63.07:1130,63,0	1/1:0,14:14:27.09:626,27,0	1/1:1,21:22:14.64:287,15,0	1/1:22,0:19:38.61:586,39,0	1/1:1,17:18:23.10:492,23,0	0/1:13,0:13:11.19:11,0,124	0/1:15,0:15:34.20:34,0,111	0/1:7,0:7:16.35:16,0,30	0/0:7,0:7:1.26:0,1,150	0/1:8,0:8:2.93:3,0,157	0/1:9,0:9:19.93:20,0,29	0/1:13,0:13:1.67:2,0,197	0/0:13,0:13:29.43:0,29,401	0/0:17,0:17:26.73:0,27,462	1/1:5,17:20:54.11:882,54,0	1/1:1,8:9:24.07:427,24,0	1/1:0,21:21:11.95:179,12,0	0/1:8,0:8:5.84:6,0,149	1/1:0,10:10:7.01:205,7,0	1/1:0,21:21:24.08:558,24,0	0/1:10,0:10:8.89:9,0,131	1/1:0,12:12:36.11:637,36,0	1/1:1,13:14:21.01:392,21,0	1/1:7,0:7:14.83:218,15,0
chr10	90749812	.	GA	G	2699.99	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=0.444;DP=387;FS=16.538;HRun=4;HaplotypeScore=81.5054;InbreedingCoeff=0.9597;MQ=62.00;MQ0=0;MQRankSum=4.317;QD=12.92;ReadPosRankSum=3.179;VQSLOD=1.5011;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:45.15:0,45,630	0/0:5,0:5:14.98:0,15,186	0/0:18,0:14:17.89:0,18,468	0/0:15,0:11:25.21:0,25,287	1/1:22,0:22:39.35:462,39,0	1/1:14,0:14:26.85:195,27,0	1/1:22,0:22:14.51:97,15,0	1/1:3,18:19:39.07:437,39,0	1/1:17,1:18:22.68:156,23,0	0/0:13,0:13:35.93:0,36,378	0/0:14,0:14:30.68:0,31,264	0/0:7,0:7:14.90:0,15,125	0/0:7,0:7:19.24:0,19,214	0/0:8,0:8:23.93:0,24,261	0/0:10,0:10:17.87:0,18,163	0/0:11,0:11:32.95:0,33,350	0/0:14,0:14:42.09:0,42,547	0/0:18,0:18:48.09:0,48,608	1/1:20,0:19:48.85:477,49,0	1/1:8,0:8:20.98:203,21,0	1/1:21,0:21:5.96:43,6,0	0/0:8,0:8:19.72:0,20,209	1/1:10,0:10:8.84:71,9,0	1/1:21,0:21:23.86:174,24,0	0/0:11,0:11:30.79:0,31,311	1/1:12,0:12:32.97:324,33,0	1/1:13,0:13:14.91:109,15,0	1/1:2,5:7:15.05:179,15,0
chr10	90749953	.	CGAAAAAAA	C	3779	PASS	AB=0.907;AC=23;AF=0.411;AN=56;BaseQRankSum=11.022;DP=496;FS=6.408;HRun=0;HaplotypeScore=114.6842;InbreedingCoeff=0.7139;MQ=50.16;MQ0=19;MQRankSum=-10.336;QD=19.09;ReadPosRankSum=0.841;VQSLOD=2.4993;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:35.95:0,36,2169	0/1:6,0:5:18.62:47,0,19	0/0:4,0:3:6.02:0,6,180	0/0:3,0:3:9.03:0,9,251	0/0:26,0:22:33.11:0,33,1195	0/0:13,0:13:36.12:0,36,1407	0/0:23,0:23:48.16:0,48,1857	0/0:30,0:27:46.25:0,46,1550	0/0:17,0:16:30.10:0,30,1072	1/1:15,12:24:27.07:633,27,0	1/1:4,8:12:9.03:228,9,0	0/1:6,2:8:0:0,0,0	1/1:3,2:4:3.01:76,3,0	1/1:10,5:15:18.06:457,18,0	1/1:12,0:12:3.01:53,3,0	1/1:5,11:16:18.06:457,18,0	1/1:27,0:25:5.27:404,5,0	1/1:7,10:15:15.05:360,15,0	0/0:21,0:19:36.12:0,36,1496	0/0:20,0:19:42.14:0,42,1274	0/0:22,0:21:48.16:0,48,1817	1/1:4,9:12:21.07:506,21,0	0/0:24,0:24:42.14:0,42,1506	0/0:28,0:27:33.11:0,33,1197	1/1:6,11:17:18.06:457,18,0	0/1:21,2:23:99:101,0,1656	0/0:29,0:28:63.21:0,63,2419	0/0:7,0:5:9.03:0,9,285
chr10	90749967	.	AAAGAAAAAAG	A	1764.90	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=11.468;DP=533;FS=1.113;HRun=0;HaplotypeScore=147.8624;InbreedingCoeff=0.1264;MQ=54.19;MQ0=16;MQRankSum=-11.126;QD=10.32;ReadPosRankSum=6.001;VQSLOD=2.1290;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:71.37:0,71,3243	1/1:1,3:4:3.01:98,3,0	0/0:9,0:7:20.96:0,21,531	0/0:9,0:5:12.02:0,12,406	0/0:22,0:20:54.12:0,54,2135	0/0:19,0:19:57.14:0,57,2161	0/0:22,0:22:63.16:0,63,2604	0/0:36,0:34:70.45:0,70,2701	0/0:19,0:18:48.13:0,48,2010	0/1:27,0:25:99:169,0,554	0/1:12,0:12:53.81:54,0,337	0/0:9,0:9:20.71:0,21,331	0/1:7,0:6:16.71:17,0,131	0/1:10,0:10:99:144,0,160	1/1:2,9:11:4.85:124,5,0	0/1:16,0:16:99:146,0,115	1/1:2,28:29:24.08:780,24,0	0/1:17,0:15:99:103,0,114	0/0:30,0:27:77.61:0,78,2641	0/0:22,0:21:59.79:0,60,1882	0/0:24,0:23:66.06:0,66,2527	0/1:13,0:12:73.97:149,0,74	0/0:22,0:22:54.15:0,54,2079	0/0:28,0:27:54.15:0,54,1913	0/1:16,0:16:99:143,0,160	0/0:31,0:31:36.07:0,36,3044	0/0:29,0:28:78.22:0,78,3266	0/1:8,0:6:0.66:1,0,439
chr10	90750773	.	TAC	T	2385.97	PASS	AB=0.526;AC=5;AF=0.089;AN=56;BaseQRankSum=8.339;DP=620;FS=7.093;HRun=0;HaplotypeScore=85.7098;InbreedingCoeff=0.7749;MQ=95.89;MQ0=0;MQRankSum=-3.561;QD=37.28;ReadPosRankSum=2.985;VQSLOD=5.8954;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,2127	0/1:1,9:10:30.88:311,0,31	0/0:22,0:22:56.94:0,57,1006	0/0:39,0:39:99:0,105,1922	0/0:20,0:20:60.21:0,60,1158	0/0:19,0:19:57.16:0,57,1032	0/0:28,0:28:78.25:0,78,1473	0/0:25,0:25:72.23:0,72,1324	0/0:15,0:15:42.12:0,42,745	0/0:13,0:13:38.96:0,39,681	0/0:11,0:11:30.10:0,30,579	0/0:26,0:26:78.23:0,78,1436	0/0:16,0:16:48.15:0,48,889	0/0:18,0:18:54.19:0,54,1042	1/1:0,28:28:81.28:1240,81,0	0/0:23,0:23:69.24:0,69,1333	1/1:0,26:26:63.21:964,63,0	0/0:17,0:17:48.16:0,48,912	0/0:19,0:19:48.15:0,48,881	0/0:20,0:20:54.19:0,54,1019	0/0:25,0:25:75.22:0,75,1380	0/0:18,0:18:54.17:0,54,1010	0/0:20,0:20:57.17:0,57,1029	0/0:32,0:32:93.32:0,93,1795	0/0:15,0:15:42.14:0,42,811	0/0:26,0:26:72.23:0,72,1336	0/0:45,0:45:99:0,135,2418	0/0:6,0:6:15.05:0,15,289
chr10	90751045	.	TTTTCC	T	10408.21	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-0.626;DP=437;FS=31.867;HRun=0;HaplotypeScore=88.3696;InbreedingCoeff=0.7101;MQ=73.38;MQ0=28;MQRankSum=0.152;QD=28.99;ReadPosRankSum=0.693;VQSLOD=2.8886;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:68.44:0,68,1343	1/1:9,0:9:24.03:297,24,0	0/1:31,0:13:4.54:5,0,150	0/0:49,0:14:6.56:0,7,147	1/1:21,0:21:60.12:897,60,0	1/1:17,0:17:48.08:659,48,0	1/1:7,0:7:14.97:150,15,0	1/1:0,21:21:59.88:587,60,0	1/1:7,0:7:18.02:220,18,0	1/1:2,0:10:23.78:341,24,0	1/1:2,0:15:20.87:212,21,0	1/1:9,0:9:24.04:314,24,0	1/1:9,0:9:27:295,27,0	1/1:13,0:13:26.92:333,27,0	1/1:13,2:15:42.09:552,42,0	1/1:6,0:6:14.96:163,15,0	1/1:18,1:19:48.11:664,48,0	1/1:14,0:14:42.03:548,42,0	1/1:3,17:18:48.05:558,48,0	1/1:17,0:17:45.04:588,45,0	1/1:7,0:7:14.99:138,15,0	1/1:2,0:5:6.01:66,6,0	1/1:0,8:7:5.77:55,6,0	1/1:13,0:13:36.09:504,36,0	1/1:18,0:18:48.10:629,48,0	1/1:0,20:20:51.68:657,52,0	1/1:19,0:17:48.09:636,48,0	1/1:9,0:9:24.05:341,24,0
chr10	90752231	.	T	TAAA	11639.12	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-10.739;DP=528;FS=4.888;HRun=8;HaplotypeScore=76.0055;InbreedingCoeff=0.9958;MQ=60.95;MQ0=1;MQRankSum=-6.561;QD=43.92;ReadPosRankSum=-0.242;VQSLOD=4.8165;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1416	0/0:6,0:6:18.06:0,18,237	0/0:24,0:20:38.41:0,38,419	0/0:18,0:15:31.52:0,32,358	1/1:4,25:29:75.17:1403,75,0	1/1:5,18:24:57.17:1092,57,0	1/1:2,5:7:21.07:421,21,0	1/1:6,15:22:54.13:948,54,0	1/1:5,15:19:36.12:726,36,0	0/0:16,0:16:48.16:0,48,631	0/0:21,0:21:54.15:0,54,710	0/0:13,0:13:21.01:0,21,276	0/0:12,0:12:27.08:0,27,355	0/0:17,0:17:42.13:0,42,552	0/0:21,0:21:48.13:0,48,627	0/0:13,0:12:33.10:0,33,434	0/0:22,0:21:54.09:0,54,657	0/0:12,0:12:18.05:0,18,236	1/1:5,12:18:48.13:881,48,0	1/1:9,20:31:66.15:1211,66,0	1/1:0,10:9:27.09:545,27,0	0/0:10,0:10:27.08:0,27,341	1/1:2,11:14:32.14:609,32,0	1/1:4,20:25:51.62:992,52,0	0/0:17,0:17:51.17:0,51,670	1/1:7,21:29:69.18:1280,69,0	1/1:3,18:23:54.19:1090,54,0	1/1:1,9:10:24:442,24,0
chr10	90752343	.	GAA	G	2553.43	PASS	AB=0.728;AC=26;AF=0.464;AN=56;BaseQRankSum=-5.772;DP=616;FS=0.959;HRun=15;HaplotypeScore=84.2944;InbreedingCoeff=0.5740;MQ=51.43;MQ0=32;MQRankSum=1.608;QD=6.79;ReadPosRankSum=2.221;VQSLOD=0.5515;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:62.94:0,63,729	0/0:3,0:8:12.48:0,12,43	0/0:36,0:4:1.94:0,2,36	0/1:34,0:12:11.44:11,0,51	1/1:14,13:28:32.45:264,32,0	1/1:7,13:20:22.18:186,22,0	1/1:11,12:20:20.47:213,20,0	1/1:10,17:29:24.61:340,25,0	1/1:9,13:21:32.60:293,33,0	0/0:8,1:20:3.11:0,3,104	0/0:21,0:25:31.22:0,31,205	0/1:7,1:21:11.33:11,0,26	0/0:17,0:21:9.20:0,9,145	0/0:4,0:13:8:0,8,53	0/0:15,0:15:21.64:0,22,124	0/1:12,1:19:16.94:17,0,69	0/0:24,0:25:18.75:0,19,209	0/0:9,0:11:12.31:0,12,72	1/1:4,12:14:31.63:245,32,0	1/1:16,8:24:19.99:256,20,0	0/0:6,6:11:0:0,0,0	0/0:6,0:8:12.72:0,13,42	1/1:6,6:12:2.09:53,2,0	1/1:18,13:31:41.55:349,42,0	0/1:10,1:26:8.64:9,0,65	1/1:14,20:30:30.92:345,31,0	1/1:12,16:26:17.86:157,18,0	0/0:5,0:3:0:0,0,0
chr10	90752502	.	TATACACACAC	T	1314.73	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.154;DP=595;FS=0.940;HRun=0;HaplotypeScore=185.9586;InbreedingCoeff=0.9712;MQ=63.07;MQ0=0;MQRankSum=-5.589;QD=41.09;ReadPosRankSum=1.040;VQSLOD=3.0218;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:53.96:0,54,2293	1/1:1,4:5:9.03:283,9,0	0/0:37,0:30:78.13:0,78,2692	0/0:31,0:26:24.75:0,25,1886	0/0:26,0:26:63.22:0,63,2882	0/0:25,0:25:66.23:0,66,3021	0/0:23,0:23:63.22:0,63,2502	0/0:43,0:43:99:0,105,4737	0/0:18,0:18:38.49:0,38,1632	0/0:20,0:20:57.20:0,57,2793	0/0:23,0:23:60.21:0,60,2907	0/0:21,0:21:48.16:0,48,2210	0/0:12,0:12:27.09:0,27,1344	0/0:16,0:16:42.14:0,42,2024	1/1:2,12:14:18.06:566,18,0	0/0:12,0:12:30.10:0,30,1533	1/1:5,8:13:21.07:600,21,0	0/0:10,0:10:30.10:0,30,1303	0/0:24,0:24:57.20:0,57,2717	0/0:26,0:26:75.26:0,75,3490	0/0:34,0:34:81.28:0,81,3658	0/0:7,0:7:21.07:0,21,1026	0/0:12,0:12:27.09:0,27,1129	0/0:29,0:28:75.26:0,75,3574	0/0:19,0:19:42.06:0,42,1842	0/0:23,0:23:51.17:0,51,2130	0/0:22,0:22:60.21:0,60,2673	0/0:18,0:18:42.14:0,42,2024
chr10	90752558	.	CA	C	5522.35	PASS	AB=0.878;AC=29;AF=0.518;AN=56;BaseQRankSum=8.973;DP=554;FS=2.091;HRun=11;HaplotypeScore=65.8689;InbreedingCoeff=0.7889;MQ=68.49;MQ0=1;MQRankSum=0.689;QD=16.29;ReadPosRankSum=1.374;VQSLOD=5.8262;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:63.14:0,63,664	0/0:4,0:4:9.02:0,9,95	0/0:12,0:10:11.48:0,11,91	0/1:14,3:15:32.64:33,0,123	1/1:5,19:24:25.15:368,25,0	1/1:6,25:31:68.89:567,69,0	1/1:6,12:18:26.94:222,27,0	1/1:9,27:36:77.83:635,78,0	1/1:2,14:17:35.96:296,36,0	0/0:28,0:28:63.14:0,63,659	0/0:18,0:18:39.09:0,39,409	0/0:22,0:22:54.10:0,54,564	0/0:17,1:19:26.28:0,26,445	0/0:18,0:18:36.08:0,36,376	0/0:20,0:20:42.11:0,42,448	0/0:17,0:18:47.26:0,47,524	0/1:10,1:11:6.20:6,0,142	0/1:11,2:13:13.22:13,0,275	1/1:7,19:26:59.91:490,60,0	1/1:7,24:31:68.89:566,69,0	1/1:2,21:23:59.93:493,60,0	0/0:12,0:13:23.89:0,24,238	1/1:2,12:14:32.95:271,33,0	1/1:1,13:14:29.95:246,30,0	0/0:15,0:15:39.10:0,39,416	1/1:3,19:23:58.97:474,59,0	1/1:2,23:26:61.97:498,62,0	1/1:1,14:15:41.95:345,42,0
chr10	90753121	.	C	CAAAAA	9665.79	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-0.344;DP=540;FS=4.217;HRun=10;HaplotypeScore=109.9742;InbreedingCoeff=0.9374;MQ=57.60;MQ0=5;MQRankSum=-10.677;QD=35.54;ReadPosRankSum=-8.397;VQSLOD=1.1718;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:69.10:0,69,1106	0/0:9,0:9:21.04:0,21,338	0/0:6,0:4:5.90:0,6,66	0/1:10,0:8:0.19:0,0,103	1/1:5,4:11:12.04:229,12,0	1/1:7,9:17:30.10:792,30,0	1/1:15,8:27:54.14:1268,54,0	1/1:19,6:29:39.07:867,39,0	1/1:11,8:23:24.08:663,24,0	0/0:32,0:31:75.14:0,75,1190	0/0:15,0:15:23.44:0,23,385	0/0:8,0:8:18.01:0,18,290	0/0:14,0:14:26.98:0,27,411	0/0:16,0:17:44.60:0,45,672	0/0:17,0:19:39.01:0,39,609	0/0:23,0:25:68.12:0,68,1027	0/0:32,0:33:80.56:0,81,1204	0/0:24,0:25:56.60:0,57,869	1/1:16,3:21:42.14:1054,42,0	1/1:13,6:19:27.09:579,27,0	1/1:11,5:19:31.55:507,32,0	0/0:19,0:19:41.97:0,42,675	1/1:7,8:17:30.10:738,30,0	1/1:13,7:22:26.51:749,27,0	0/0:15,0:18:38.51:0,39,588	1/1:13,7:23:45.11:982,45,0	1/1:6,10:18:35.81:917,36,0	1/1:6,3:9:12.04:321,12,0
chr10	90753919	.	TTCTCTC	T	1809.83	PASS	AB=0.862;AC=24;AF=0.462;AN=52;BaseQRankSum=7.636;DP=613;FS=7.338;HRun=0;HaplotypeScore=123.9782;InbreedingCoeff=0.6657;MQ=70.48;MQ0=14;MQRankSum=-4.833;QD=6.68;ReadPosRankSum=1.075;VQSLOD=1.6753;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:45.13:0,45,999	0/0:6,0:11:3.24:0,3,40	./.	0/0:46,0:25:3.48:0,3,58	1/1:21,2:23:9.03:144,9,0	1/1:12,8:20:15.05:283,15,0	1/1:11,6:16:6.02:121,6,0	./.	1/1:13,0:19:11.97:139,12,0	0/0:33,0:35:51.13:0,51,1064	0/0:13,0:13:12.51:0,13,352	0/0:17,0:17:21.07:0,21,588	0/0:14,0:15:21.07:0,21,565	0/0:13,0:15:17.20:0,17,413	1/1:19,0:24:6.55:43,7,0	0/0:22,0:22:42.14:0,42,1156	0/1:22,0:23:73.89:163,0,74	0/0:15,0:15:19.62:0,20,545	0/0:16,0:16:1.55:0,2,4	0/1:9,1:12:13.18:113,0,13	1/1:24,12:35:8.94:119,9,0	0/0:20,0:20:29.89:0,30,737	1/1:11,5:16:6.02:122,6,0	1/1:13,9:23:8.99:123,9,0	0/0:20,0:20:18.06:0,18,399	1/1:15,7:22:16.79:341,17,0	1/1:9,5:14:11.66:186,12,0	1/1:14,1:16:6.02:103,6,0
chr10	90754922	.	T	TA	6343.15	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=4.857;DP=530;FS=0.783;HRun=8;HaplotypeScore=72.6383;InbreedingCoeff=0.9575;MQ=61.50;MQ0=35;MQRankSum=-1.072;QD=24.21;ReadPosRankSum=-1.506;VQSLOD=4.8804;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:89.08:0,89,802	0/0:8,0:8:23.98:0,24,212	0/0:9,0:5:8.98:0,9,74	0/0:18,0:16:23.65:0,24,172	1/1:3,19:19:39.11:447,39,0	1/1:0,18:18:42.08:470,42,0	1/1:4,16:16:39.07:435,39,0	1/1:6,24:29:66.18:751,66,0	1/1:3,20:21:48.14:554,48,0	0/0:14,0:13:30:0,30,270	0/0:19,0:17:39.01:0,39,356	0/0:16,0:16:39.01:0,39,357	0/0:10,0:8:18:0,18,164	0/0:22,0:19:51.03:0,51,466	0/0:18,0:16:41.85:0,42,384	0/0:24,0:20:51.03:0,51,467	0/0:34,0:32:66.03:0,66,604	0/0:14,0:13:21:0,21,192	1/1:5,22:25:60.14:678,60,0	1/1:3,13:16:28.11:388,28,0	1/1:7,15:21:39.12:450,39,0	0/0:13,0:11:23.96:0,24,211	1/1:1,9:10:27.08:307,27,0	1/1:1,24:22:51.15:588,51,0	0/0:9,0:8:12:0,12,110	1/1:5,17:22:2.24:534,2,0	1/1:2,17:18:42.08:464,42,0	1/1:0,8:8:24.07:277,24,0
chr10	90755844	.	AT	A	6190.60	PASS	AB=0.842;AC=27;AF=0.482;AN=56;BaseQRankSum=12.460;DP=562;FS=0.000;HRun=10;HaplotypeScore=80.8409;InbreedingCoeff=0.8150;MQ=72.01;MQ0=1;MQRankSum=-2.958;QD=19.72;ReadPosRankSum=-0.161;VQSLOD=5.3167;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,1:38:70.20:0,70,1002	0/0:7,0:7:18.03:0,18,184	0/1:15,0:12:24.26:24,0,97	0/0:13,0:10:9.42:0,9,75	1/1:4,20:24:59.95:514,60,0	1/1:2,20:22:59.94:517,60,0	1/1:1,17:18:50.99:443,51,0	1/1:5,36:41:99:939,111,0	1/1:2,18:20:59.97:517,60,0	0/0:21,1:22:60.16:0,60,664	0/0:21,0:21:60.14:0,60,649	0/1:12,2:14:9.81:10,0,356	0/0:12,0:12:24.06:0,24,266	0/0:13,0:13:30.08:0,30,332	0/0:17,0:17:48.11:0,48,521	0/0:16,1:17:22.04:0,22,448	0/0:26,1:27:45.50:0,45,675	0/0:25,1:25:46.10:0,46,717	0/1:7,8:15:0.28:215,0,0	1/1:4,20:25:70.96:593,71,0	1/1:3,14:17:29.90:252,30,0	0/0:17,0:17:33.01:0,33,349	1/1:7,27:34:20.58:633,21,0	1/1:4,7:11:17.99:156,18,0	0/0:18,0:18:45.10:0,45,483	1/1:3,28:31:89.95:775,90,0	1/1:2,19:21:50.98:446,51,0	1/1:0,6:6:18:156,18,0
chr10	90755892	.	GTCT	G	10768.62	PASS	AB=0.543;AC=25;AF=0.446;AN=56;BaseQRankSum=13.679;DP=562;FS=1.436;HRun=0;HaplotypeScore=99.1380;InbreedingCoeff=0.9162;MQ=91.09;MQ0=0;MQRankSum=-10.063;QD=39.02;ReadPosRankSum=0.335;VQSLOD=5.7637;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.25:0,78,1674	0/0:6,0:6:18.06:0,18,378	0/0:31,0:31:87.26:0,87,1762	0/0:19,0:19:54.18:0,54,1115	1/1:3,21:24:60.15:910,60,0	1/1:4,21:25:66.23:1057,66,0	1/1:0,14:14:39.13:626,39,0	1/1:11,14:25:54.18:866,54,0	1/1:0,17:17:48.16:771,48,0	0/0:24,0:24:72.25:0,72,1582	0/0:25,0:25:66.23:0,66,1454	0/0:16,0:16:45.15:0,45,993	0/0:14,0:14:42.14:0,42,926	0/0:18,0:18:51.16:0,51,1084	0/0:12,0:12:33.11:0,33,728	0/0:18,0:18:54.19:0,54,1173	0/0:25,0:25:66.23:0,66,1457	0/0:21,0:21:63.17:0,63,1291	1/1:4,18:22:54.17:844,54,0	1/1:3,22:25:66.22:1056,66,0	1/1:0,16:16:36.12:577,36,0	0/0:17,0:17:42.14:0,42,923	1/1:5,35:40:87.30:1396,87,0	1/1:3,14:17:39.13:623,39,0	0/0:13,0:13:36.12:0,36,795	0/1:3,16:19:12.09:742,0,12	1/1:3,25:28:75.25:1204,75,0	1/1:1,3:4:6.02:96,6,0
chr10	90756308	.	G	GA	6450.16	PASS	AB=0.579;AC=41;AF=0.732;AN=56;BaseQRankSum=-5.286;DP=449;FS=11.382;HRun=10;HaplotypeScore=63.2761;InbreedingCoeff=0.8565;MQ=51.85;MQ0=11;MQRankSum=-2.476;QD=20.67;ReadPosRankSum=-1.620;VQSLOD=4.6350;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:53.81:0,54,442	0/0:1,0:4:6.11:0,6,18	0/0:32,0:9:8.52:0,9,115	0/0:32,0:8:8.27:0,8,55	1/1:9,22:29:57.12:594,57,0	1/1:1,13:15:38.93:397,39,0	1/1:2,11:12:27.07:288,27,0	1/1:5,14:17:32.81:291,33,0	1/1:4,10:14:24.06:256,24,0	1/1:2,12:14:36.09:383,36,0	1/1:5,12:18:29.91:300,30,0	1/1:1,9:10:27.06:282,27,0	0/1:3,8:11:0.58:200,0,1	1/1:4,10:14:33.08:347,33,0	0/0:3,0:9:10.18:0,10,29	1/1:2,12:14:30.07:319,30,0	0/0:3,0:21:30.55:0,31,88	1/1:3,8:10:21.05:224,21,0	1/1:5,16:20:48.05:488,48,0	1/1:4,8:13:2.26:213,2,0	1/1:0,10:10:15.04:160,15,0	1/1:4,19:22:45.11:479,45,0	0/0:17,0:17:38.95:0,39,320	1/1:3,13:16:32.11:324,32,0	1/1:1,7:8:20.92:205,21,0	1/1:7,11:18:33.08:351,33,0	1/1:3,6:11:21.22:190,21,0	1/1:3,5:8:15.04:160,15,0
chr10	90756332	.	A	AAG	882.30	PASS	AB=0.881;AC=17;AF=0.304;AN=56;BaseQRankSum=-1.971;DP=481;FS=49.838;HRun=0;HaplotypeScore=133.7359;InbreedingCoeff=-0.4387;MQ=59.38;MQ0=1;MQRankSum=-6.055;QD=2.71;ReadPosRankSum=-3.459;VQSLOD=-0.0444;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,2:20:31.18:31,0,454	0/0:6,0:6:14.98:0,15,183	0/0:26,0:13:19.51:0,20,184	0/1:29,0:13:11.82:12,0,67	0/1:28,4:32:65.64:66,0,293	0/0:15,0:15:25.63:0,26,315	0/1:19,5:20:99:119,0,137	0/0:20,0:17:36.12:0,36,490	0/1:13,1:14:14.73:15,0,265	0/1:17,2:19:99:105,0,403	0/1:16,4:20:86.23:86,0,87	0/1:9,4:13:80.96:81,0,100	0/1:10,3:13:71.61:72,0,207	0/1:13,2:15:54.02:54,0,154	0/1:8,1:9:16:16,0,125	0/1:14,1:15:19.72:20,0,192	0/0:16,0:16:31.26:0,31,363	0/1:7,2:9:68.69:69,0,186	0/0:13,1:12:32.78:0,33,425	0/0:16,0:16:20.49:0,20,223	0/0:7,0:7:12.01:0,12,147	0/1:18,5:23:99:126,0,378	0/1:26,1:27:8.60:9,0,273	0/0:12,1:13:17.95:0,18,186	0/0:16,1:17:12.30:0,12,216	0/1:31,4:35:99:140,0,663	0/1:7,1:8:21.36:21,0,166	0/0:6,0:6:7.57:0,8,88
chr10	90757414	.	C	CAG	384.12	PASS	AB=0.944;AC=29;AF=0.853;AN=34;BaseQRankSum=-4.162;DP=87;FS=1.708;HRun=0;HaplotypeScore=40.5429;InbreedingCoeff=0.0270;MQ=88.43;MQ0=9;MQRankSum=-0.021;QD=5.26;ReadPosRankSum=-1.880;VQSLOD=2.0638;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:2:5.99:48,6,0	1/1:2,0:2:3:25,3,0	0/1:8,0:6:11.35:11,0,31	0/1:11,2:7:25.67:29,0,26	./.	1/1:4,1:5:3.09:44,3,0	1/1:1,2:4:2.97:20,3,0	1/1:1,0:1:3:26,3,0	./.	1/1:0,3:3:9.01:106,9,0	0/1:2,0:2:0:0,0,0	./.	0/0:1,1:2:2.74:0,3,12	1/1:1,2:3:0.47:1,0,0	./.	./.	./.	./.	1/1:8,0:6:2.81:40,3,0	1/1:1,0:1:3:25,3,0	1/1:7,0:6:5.97:46,6,0	./.	1/1:0,3:4:2.94:18,3,0	./.	./.	1/1:5,0:3:0.35:23,0,0	1/1:1,0:1:2.90:16,3,0	./.
chr10	90757534	.	TACAG	T	1316.84	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.482;DP=853;FS=9.945;HRun=0;HaplotypeScore=264.4628;InbreedingCoeff=0.9900;MQ=56.76;MQ0=2;MQRankSum=2.012;QD=17.33;ReadPosRankSum=1.304;VQSLOD=1.9963;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:68.96:0,69,1697	1/1:0,10:10:18.06:307,18,0	0/0:45,0:40:63.42:0,63,1760	0/0:39,0:35:67.61:0,68,1252	0/0:32,0:32:44.25:0,44,1010	0/0:35,0:35:22.37:0,22,541	0/0:27,0:27:38.80:0,39,808	0/0:33,0:32:75.19:0,75,1574	0/0:18,0:18:21.07:0,21,445	0/0:49,0:49:99:0,129,3186	0/0:29,0:29:33.65:0,34,773	0/0:24,0:24:31.49:0,31,771	0/0:23,0:23:48.08:0,48,1144	0/0:25,0:25:44.20:0,44,950	1/1:1,32:33:30.10:539,30,0	0/0:15,0:15:27.09:0,27,657	1/1:4,29:33:36.08:612,36,0	0/0:26,0:26:57.18:0,57,1406	0/0:19,0:19:51.15:0,51,1215	0/0:31,0:31:87.30:0,87,2130	0/0:66,0:66:99:0,108,2575	0/0:19,0:19:23.39:0,23,479	0/0:25,0:25:48.11:0,48,1022	0/0:54,0:54:99:0,101,2455	0/0:15,0:15:39.08:0,39,835	0/0:39,0:39:99:0,108,2540	0/0:30,0:30:52.60:0,53,1171	0/0:9,0:9:18.06:0,18,467
chr10	90757676	.	A	AACAGACAGACAG	7051.97	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=7.296;DP=747;FS=7.133;HRun=0;HaplotypeScore=268.6866;InbreedingCoeff=0.9024;MQ=54.90;MQ0=14;MQRankSum=-9.899;QD=20.56;ReadPosRankSum=-2.994;VQSLOD=2.6029;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:99:0,105,3105	0/0:6,0:6:9.03:0,9,260	0/0:48,0:20:33.91:0,34,740	0/0:54,0:24:12.85:0,13,295	0/1:29,0:29:2.48:472,0,2	1/1:28,0:28:54.12:693,54,0	1/1:26,0:24:21.51:295,22,0	1/1:62,0:61:99:1932,111,0	1/1:21,0:21:31.59:388,32,0	0/0:34,0:34:86.96:0,87,2357	0/0:22,0:22:51.17:0,51,1270	0/0:14,0:14:33.11:0,33,907	0/0:22,0:22:54.12:0,54,1439	0/0:18,0:18:48.16:0,48,1406	0/0:33,0:33:90.24:0,90,2231	0/0:25,0:25:66.23:0,66,2018	0/0:32,0:32:53.35:0,53,2175	0/0:18,0:18:45.12:0,45,1268	1/1:29,0:28:58.94:729,59,0	1/1:13,0:13:11.89:94,12,0	1/1:25,0:24:12.40:163,12,0	0/0:15,0:14:35.99:0,36,658	1/1:7,12:19:11.96:172,12,0	1/1:29,0:29:7.59:444,8,0	0/0:22,0:22:57.20:0,57,1559	1/1:31,0:29:78.18:1253,78,0	1/1:6,16:25:17.37:271,17,0	1/1:5,0:5:6.02:146,6,0
chr10	90757684	.	G	GACAGACAGACAGACAC	9037.53	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=6.058;DP=729;FS=2.993;HRun=0;HaplotypeScore=301.4510;InbreedingCoeff=0.9410;MQ=52.67;MQ0=15;MQRankSum=-10.229;QD=26.43;ReadPosRankSum=-5.262;VQSLOD=2.8248;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:99:0,117,3816	0/0:4,0:4:9.03:0,9,275	0/0:41,0:17:39.09:0,39,858	0/0:51,0:16:3.84:0,4,296	1/1:28,1:29:19.42:566,19,0	1/1:28,0:28:54.20:839,54,0	1/1:25,0:22:27.39:472,27,0	1/1:60,0:59:99:2233,126,0	1/1:19,0:19:29.75:491,30,0	0/0:33,0:33:89.98:0,90,2797	0/0:24,0:24:51.17:0,51,1389	0/0:12,0:12:36.11:0,36,1128	0/0:18,0:18:54.12:0,54,1618	0/0:17,0:17:51.15:0,51,1636	0/0:31,0:31:93.27:0,93,2778	0/0:27,0:27:75.17:0,75,2495	0/0:28,0:28:43.53:0,44,2643	0/0:18,0:18:48.13:0,48,1521	1/1:30,0:27:63.36:1142,63,0	1/1:13,0:13:11.89:111,12,0	1/1:27,0:26:14.92:255,15,0	0/0:19,0:18:39.11:0,39,773	1/1:16,0:17:14.39:157,14,0	1/1:24,1:25:11.35:469,11,0	0/0:22,0:22:57.20:0,57,1738	1/1:36,0:34:99:1749,99,0	1/1:26,0:26:20.99:319,21,0	1/1:2,4:7:6.02:236,6,0
chr10	90759317	.	GTTTA	G	140.32	PASS	AB=0.860;AC=3;AF=0.100;AN=30;BaseQRankSum=4.335;DP=216;FS=0.000;HRun=0;HaplotypeScore=51.7814;InbreedingCoeff=0.3608;MQ=44.54;MQ0=48;MQRankSum=-0.787;QD=3.60;ReadPosRankSum=-1.716;VQSLOD=0.8619;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:78.27:0,78,2156	./.	0/0:16,3:4:2.52:0,3,159	0/1:31,5:13:99:150,0,404	./.	./.	1/1:0,2:2:6.02:78,6,0	./.	./.	0/0:23,0:21:60.21:0,60,1665	0/0:6,0:6:18.06:0,18,520	0/0:14,0:14:36.12:0,36,991	0/0:7,0:6:18.06:0,18,445	0/0:14,0:11:21.06:0,21,498	./.	0/0:13,0:10:24.08:0,24,612	./.	0/0:14,0:10:27.09:0,27,732	./.	./.	./.	0/0:14,0:14:39.12:0,39,1038	./.	./.	0/0:12,0:12:36.11:0,36,938	0/0:1,0:1:3.01:0,3,87	./.	0/0:4,0:3:9.03:0,9,261
chr10	90759665	.	A	ATT	1293.61	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=6.951;DP=297;FS=69.509;HRun=0;HaplotypeScore=91.3819;InbreedingCoeff=0.5904;MQ=43.56;MQ0=60;MQRankSum=-3.527;QD=9.05;ReadPosRankSum=-0.324;VQSLOD=0.3220;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:24:60.23:0,60,674	0/0:3,0:1:0:0,0,0	0/0:31,0:4:8.50:0,8,64	0/1:39,0:9:1.62:2,0,103	1/1:6,0:2:3.01:35,3,0	0/1:9,0:8:22.21:117,0,22	1/1:6,0:5:7.72:52,8,0	1/1:7,1:7:20.62:200,21,0	1/1:6,0:4:2.65:21,3,0	0/0:14,0:13:36.12:0,36,460	0/0:14,0:14:37.82:0,38,382	0/0:7,0:5:10.85:0,11,115	0/0:3,0:2:6.01:0,6,68	0/0:6,0:5:10.37:0,10,93	1/1:8,0:7:17.34:174,17,0	0/0:9,0:7:12:0,12,134	1/1:11,0:7:14.37:118,14,0	0/0:15,0:13:27.11:0,27,265	1/1:15,3:10:23.98:305,24,0	1/1:6,0:5:11.93:126,12,0	0/1:4,0:3:1.27:31,0,1	0/0:1,0:1:3.01:0,3,36	1/1:1,0:1:3.01:35,3,0	1/1:1,0:1:3.01:34,3,0	0/0:14,0:10:28.80:0,29,322	1/1:5,2:6:6.91:162,7,0	1/1:9,0:5:3.64:68,4,0	0/0:9,0:2:4.40:0,4,18
chr10	90761303	.	CTGTATGTGTGTG	C	377.41	PASS	AB=0.989;AC=9;AF=0.161;AN=56;BaseQRankSum=1.135;DP=280;FS=0.000;HRun=0;HaplotypeScore=95.3931;InbreedingCoeff=0.4169;MQ=83.63;MQ0=1;MQRankSum=1.791;QD=7.12;ReadPosRankSum=-3.106;VQSLOD=1.1072;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:41.84:0,42,2202	1/1:0,1:1:3.01:113,3,0	0/0:29,0:19:47.19:0,47,1069	0/0:17,0:11:24.05:0,24,971	0/1:8,0:8:8.92:9,0,416	0/0:6,0:6:9.03:0,9,323	0/0:9,0:9:9.03:0,9,323	0/1:28,0:29:22.62:23,0,1957	0/0:9,0:9:18.06:0,18,646	0/0:9,0:9:27.09:0,27,1372	0/0:8,0:8:24.08:0,24,1473	0/0:4,0:4:12.03:0,12,443	0/0:8,0:8:21.04:0,21,973	0/0:9,0:9:14.96:0,15,766	1/1:7,1:8:14.98:129,15,0	0/0:6,0:6:15.04:0,15,628	1/1:1,4:5:6.02:225,6,0	0/0:14,0:14:36.12:0,36,2076	0/0:8,0:8:1.11:0,1,746	0/0:11,0:11:15.05:0,15,539	0/1:2,0:2:17.95:18,0,103	0/0:6,0:6:15.05:0,15,924	0/0:4,0:4:9.50:0,10,369	0/0:6,0:6:9.03:0,9,323	0/0:12,0:12:30.07:0,30,1527	0/0:9,0:9:22.63:0,23,731	0/0:9,0:9:12.04:0,12,431	0/0:16,0:16:27.09:0,27,969
chr10	90761305	.	GTA	G	3230.05	PASS	AB=0.667;AC=31;AF=0.554;AN=56;BaseQRankSum=6.146;DP=273;FS=4.508;HRun=0;HaplotypeScore=38.3193;InbreedingCoeff=0.7991;MQ=82.86;MQ0=1;MQRankSum=-1.742;QD=23.41;ReadPosRankSum=-0.505;VQSLOD=2.8040;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:42.09:0,42,705	1/1:1,0:1:2.96:19,3,0	0/0:29,0:19:17.34:0,17,419	0/0:16,0:10:23.93:0,24,256	1/1:4,4:8:15.02:206,15,0	1/1:0,6:6:9.03:137,9,0	1/1:0,9:9:9.03:137,9,0	1/1:3,25:28:74.92:869,75,0	1/1:0,8:8:18.06:275,18,0	0/0:9,0:9:27.07:0,27,430	0/0:9,0:9:24.08:0,24,462	0/0:4,0:4:12.01:0,12,165	0/0:7,0:7:21.04:0,21,338	0/0:9,0:9:15.02:0,15,232	1/1:7,0:7:14.89:112,15,0	0/0:5,0:5:15.02:0,15,221	1/1:5,0:5:5.91:38,6,0	0/0:14,0:14:36.10:0,36,644	1/1:3,6:8:1.02:203,1,0	1/1:1,11:12:15.05:228,15,0	1/1:2,0:2:5.97:45,6,0	0/0:6,0:6:15.05:0,15,289	0/1:2,2:4:11.19:103,0,11	1/1:0,6:6:9.03:137,9,0	0/0:10,0:10:30.07:0,30,511	1/1:0,9:9:23.57:340,24,0	1/1:0,9:9:12.04:182,12,0	1/1:0,15:15:27.09:411,27,0
chr10	90761366	.	TAC	T	1052.63	PASS	AB=0.844;AC=24;AF=0.522;AN=46;BaseQRankSum=-1.745;DP=192;FS=0.729;HRun=0;HaplotypeScore=57.8511;InbreedingCoeff=0.3321;MQ=94.01;MQ0=4;MQRankSum=-2.495;QD=8.04;ReadPosRankSum=-3.564;VQSLOD=2.3819;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:30.01:0,30,475	./.	0/1:27,0:15:8.90:9,0,14	0/1:42,0:22:11.50:12,0,39	./.	1/1:1,4:5:14.87:111,15,0	1/1:2,1:3:5.94:43,6,0	1/1:21,2:23:62.46:582,62,0	1/1:0,1:1:3.01:43,3,0	0/0:7,0:7:2.93:0,3,173	0/0:8,0:8:13.74:0,14,100	0/0:1,0:1:3.01:0,3,31	0/0:2,0:2:5.99:0,6,53	0/0:5,0:5:7.57:0,8,67	0/1:1,2:3:14.53:37,0,15	1/1:2,0:2:2.99:24,3,0	0/1:8,2:10:54.90:87,0,55	0/0:13,0:13:30.06:0,30,305	1/1:0,4:4:8.99:107,9,0	1/1:2,0:2:3:25,3,0	./.	./.	1/1:1,0:1:2.99:24,3,0	./.	0/0:7,0:7:2.16:0,2,112	1/1:3,0:2:3:26,3,0	1/1:2,1:3:8.99:74,9,0	0/0:2,0:2:0:0,0,0
chr10	90761368	.	C	CATAT	1471.41	PASS	AB=1.000;AC=20;AF=0.476;AN=42;BaseQRankSum=-3.414;DP=195;FS=0.000;HRun=0;HaplotypeScore=63.6948;InbreedingCoeff=0.4118;MQ=93.32;MQ0=5;MQRankSum=0.705;QD=20.44;ReadPosRankSum=0.720;VQSLOD=3.2004;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:24.07:0,24,372	./.	0/0:29,0:15:1.47:0,1,6	0/0:44,0:22:3.84:0,4,41	./.	0/0:5,0:5:3.70:0,4,30	0/0:3,0:3:0:0,0,0	0/1:23,0:23:21.32:22,0,21	0/0:1,0:1:3:0,3,25	1/1:3,3:6:9.03:188,9,0	1/1:2,6:8:3.01:74,3,0	1/1:0,1:1:3.01:74,3,0	1/1:0,3:3:6.01:147,6,0	1/1:1,3:5:8.77:159,9,0	0/0:3,0:3:6:0,6,54	1/1:1,0:1:1.82:5,2,0	0/0:10,0:10:16.17:0,16,145	1/1:1,11:13:26.83:604,27,0	0/0:4,0:4:5.99:0,6,48	./.	./.	./.	./.	./.	1/1:1,6:7:12.04:296,12,0	0/0:3,0:2:0.46:0,0,1	0/1:3,0:3:17.47:17,0,21	1/1:2,0:2:2.99:24,3,0
chr10	90761384	.	TATAA	T	1259.90	PASS	AB=0.983;AC=20;AF=0.370;AN=54;BaseQRankSum=-0.211;DP=219;FS=0.633;HRun=0;HaplotypeScore=62.6205;InbreedingCoeff=0.4449;MQ=89.16;MQ0=4;MQRankSum=-1.692;QD=14.82;ReadPosRankSum=-1.812;VQSLOD=2.8295;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:50.95:0,51,928	./.	0/0:21,0:12:14.84:0,15,136	0/0:29,0:13:22.71:0,23,152	1/1:4,0:4:8.48:71,8,0	1/1:3,4:7:21.04:231,21,0	1/1:2,0:2:5.97:51,6,0	0/1:24,0:24:44.15:328,0,44	1/1:2,0:2:2.53:24,3,0	0/0:8,0:8:24.05:0,24,333	0/0:9,0:9:16.91:0,17,172	0/0:3,0:3:9.01:0,9,119	0/0:3,0:3:6.02:0,6,128	0/0:8,0:8:18.02:0,18,250	0/1:9,0:9:23.37:128,0,23	0/0:3,0:3:9:0,9,81	0/1:13,1:14:99:178,0,120	0/0:13,0:13:30.09:0,30,606	1/1:10,0:10:15.95:143,16,0	0/0:1,0:1:2.99:0,3,24	1/1:1,0:1:2.99:24,3,0	0/0:3,0:3:9.01:0,9,83	0/0:2,0:2:2.80:0,3,13	1/1:1,0:1:2.99:24,3,0	0/0:8,0:8:18.05:0,18,315	0/1:6,0:5:22.67:94,0,23	1/1:4,1:5:14.99:141,15,0	0/0:2,0:2:3.01:0,3,40
chr10	90762275	.	C	CT	768.50	PASS	AB=0.889;AC=7;AF=0.125;AN=56;BaseQRankSum=1.201;DP=405;FS=0.674;HRun=12;HaplotypeScore=50.7285;InbreedingCoeff=0.6844;MQ=71.30;MQ0=1;MQRankSum=0.402;QD=13.25;ReadPosRankSum=-0.019;VQSLOD=3.4478;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:36:65.02:0,65,499	1/1:0,3:3:9.01:88,9,0	0/0:13,0:7:3.89:0,4,24	0/0:13,0:9:8.73:0,9,56	0/0:21,0:23:43.62:0,44,307	0/0:12,0:12:26.83:0,27,197	0/0:11,0:12:19.92:0,20,137	0/0:22,1:24:2.23:0,2,168	0/0:14,0:14:26.71:0,27,189	0/0:15,0:15:17.84:0,18,131	0/0:17,0:17:23.76:0,24,175	0/0:11,0:11:26.82:0,27,195	0/0:5,0:6:7.96:0,8,49	0/0:10,0:10:20.79:0,21,151	1/1:1,11:12:27.04:263,27,0	0/1:7,1:8:11.28:11,0,92	1/1:11,24:35:57.08:548,57,0	0/0:20,0:20:38.71:0,39,284	0/0:8,0:7:17.88:0,18,129	0/0:8,0:8:17.87:0,18,129	0/0:16,0:17:28.79:0,29,199	0/0:7,0:7:17.87:0,18,128	0/0:10,0:10:17.87:0,18,131	0/0:10,0:10:14.85:0,15,108	0/0:7,0:8:16.81:0,17,115	0/0:19,0:19:16.92:0,17,198	0/0:21,0:21:41.70:0,42,306	0/0:13,0:13:29.80:0,30,219
chr10	90762430	.	A	ATT	4567.54	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=10.785;DP=434;FS=0.410;HRun=0;HaplotypeScore=90.4792;InbreedingCoeff=0.9676;MQ=64.30;MQ0=1;MQRankSum=-4.936;QD=22.07;ReadPosRankSum=0.121;VQSLOD=5.0823;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1592	0/0:6,0:6:16.32:0,16,107	0/0:15,0:13:25.20:0,25,297	0/0:17,0:15:24.50:0,24,384	1/1:1,8:10:20.82:227,21,0	1/1:3,14:22:43.38:539,43,0	1/1:4,5:10:14.93:211,15,0	1/1:13,17:30:45.72:595,46,0	1/1:1,13:14:27.60:367,28,0	0/0:22,0:22:63.21:0,63,1013	0/0:10,0:10:27.09:0,27,421	0/0:11,0:11:30.10:0,30,482	0/0:7,0:7:21.06:0,21,318	0/0:10,0:10:30.10:0,30,484	0/0:13,0:13:30.03:0,30,175	0/0:15,0:15:45.15:0,45,709	0/0:24,0:24:45.81:0,46,357	0/0:19,0:19:57.19:0,57,915	1/1:9,5:17:4.57:241,5,0	1/1:4,10:15:20.64:283,21,0	1/1:2,7:9:20.54:290,21,0	0/0:12,0:12:36.08:0,36,555	1/1:1,3:6:11.46:114,11,0	1/1:3,17:21:33.57:493,34,0	0/0:12,0:12:33.09:0,33,498	1/1:10,12:22:18.42:439,18,0	1/1:2,15:18:36.10:503,36,0	1/1:4,6:11:20.47:265,20,0
chr10	90762431	.	A	ATT	6958.32	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=9.062;DP=458;FS=3.069;HRun=11;HaplotypeScore=94.5618;InbreedingCoeff=0.9838;MQ=62.89;MQ0=1;MQRankSum=-5.974;QD=25.58;ReadPosRankSum=-2.581;VQSLOD=4.3704;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:78.01:0,78,746	1/1:2,4:6:12.51:175,13,0	0/0:16,0:13:19.67:0,20,159	0/0:17,0:14:17.97:0,18,168	1/1:11,0:11:26.76:336,27,0	1/1:22,0:22:47.76:583,48,0	1/1:12,0:12:23.99:306,24,0	1/1:35,0:34:57.31:753,57,0	1/1:16,0:16:36.08:481,36,0	0/0:22,0:22:54.07:0,54,524	0/0:9,0:10:14.93:0,15,195	0/0:11,0:11:26.98:0,27,254	0/0:7,0:7:18.01:0,18,174	0/0:10,0:10:22.45:0,22,230	1/1:3,11:15:35.60:477,36,0	0/0:15,0:15:45.07:0,45,436	1/1:6,18:26:56.12:729,56,0	0/0:21,0:21:47.97:0,48,459	1/1:18,0:17:23.98:284,24,0	1/1:16,0:16:30.90:378,31,0	1/1:11,0:11:24.03:320,24,0	0/0:12,0:12:29.76:0,30,274	1/1:7,0:6:11.79:118,12,0	1/1:21,0:21:39.02:536,39,0	0/0:11,0:12:26.94:0,27,307	1/1:26,0:26:45.12:620,45,0	1/1:19,0:19:42.13:584,42,0	1/1:11,0:11:20.98:277,21,0
chr10	90762912	.	CT	C	2543.20	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=10.994;DP=510;FS=13.351;HRun=8;HaplotypeScore=103.6377;InbreedingCoeff=0.6497;MQ=72.72;MQ0=1;MQRankSum=-8.318;QD=8.74;ReadPosRankSum=1.413;VQSLOD=0.7298;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.23:0,84,988	1/1:0,3:3:9.01:87,9,0	0/0:32,0:23:18.20:0,18,398	0/1:28,0:13:12.39:12,0,94	1/1:23,0:24:56.71:265,57,0	1/1:14,0:13:35.41:170,35,0	1/1:19,0:19:42.06:176,42,0	0/1:15,0:15:3.63:30,0,4	1/1:15,0:15:9.93:125,10,0	0/0:14,0:14:39.12:0,39,471	0/0:13,0:13:33.09:0,33,387	0/0:12,0:12:21.06:0,21,252	0/0:12,0:12:24.03:0,24,255	0/0:22,0:22:54.16:0,54,641	1/1:3,10:13:38.24:323,38,0	0/0:21,0:21:60.17:0,60,714	1/1:2,21:23:48.07:463,48,0	0/0:28,0:28:72.20:0,72,856	0/1:17,0:17:25.31:77,0,25	1/1:22,0:22:60.49:301,60,0	1/1:10,0:10:23.85:104,24,0	0/0:26,0:26:69.20:0,69,815	1/1:21,0:21:18.01:165,18,0	1/1:14,0:14:21.72:89,22,0	0/0:11,0:11:27.06:0,27,305	0/1:23,0:23:85.44:121,0,85	1/1:21,0:21:31.68:203,32,0	0/1:9,0:9:25.27:48,0,25
chr10	90762920	.	TC	T	6768.26	PASS	AB=0.874;AC=29;AF=0.518;AN=56;BaseQRankSum=7.327;DP=504;FS=6.204;HRun=5;HaplotypeScore=94.8558;InbreedingCoeff=0.7784;MQ=71.59;MQ0=1;MQRankSum=-7.630;QD=25.54;ReadPosRankSum=0.038;VQSLOD=3.9577;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.14:0,87,1096	0/1:4,0:4:5.77:6,0,17	0/0:30,0:21:31.34:0,31,440	0/0:29,0:14:6.21:0,6,111	1/1:5,21:26:74.98:807,75,0	1/1:1,13:14:41.79:448,42,0	1/1:2,18:20:60.05:637,60,0	1/1:9,7:16:39.06:398,39,0	1/1:4,13:17:48.10:516,48,0	0/0:15,0:15:45.13:0,45,572	0/0:12,0:12:33.09:0,33,416	0/0:13,0:13:27.05:0,27,315	0/0:9,0:9:18.06:0,18,236	0/0:20,0:20:51.16:0,51,663	1/1:12,0:12:8.17:55,8,0	0/0:19,0:19:57.19:0,57,757	0/1:22,0:22:14.16:66,0,14	0/0:26,0:26:72.18:0,72,920	1/1:6,9:15:41.96:417,42,0	1/1:2,22:24:72.14:785,72,0	1/1:1,10:11:27.08:305,27,0	0/0:25,0:25:72.15:0,72,893	1/1:5,15:20:56.88:587,57,0	1/1:2,10:12:33.50:348,33,0	0/0:11,0:11:24.08:0,24,318	0/1:9,14:23:53.13:533,0,53	1/1:3,17:20:57.15:633,57,0	1/1:3,6:9:21.04:227,21,0
chr10	90762946	.	TAA	T	6466.38	PASS	AB=0.743;AC=26;AF=0.464;AN=56;BaseQRankSum=-1.473;DP=495;FS=1.214;HRun=11;HaplotypeScore=109.8039;InbreedingCoeff=0.8743;MQ=68.03;MQ0=3;MQRankSum=-5.290;QD=24.22;ReadPosRankSum=-2.226;VQSLOD=4.0422;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:66.22:0,66,1013	0/0:0,0:5:9.20:0,9,33	0/1:14,0:11:4.08:4,0,210	0/0:21,0:16:18.65:0,19,246	1/1:7,21:28:54.04:555,54,0	1/1:1,17:18:51.13:543,51,0	1/1:4,19:23:57.13:607,57,0	1/1:3,24:27:69.08:723,69,0	1/1:3,10:13:33.08:351,33,0	0/0:4,0:12:27.04:0,27,263	0/0:4,0:14:36.02:0,36,367	0/0:1,0:14:24.04:0,24,230	0/0:1,0:4:6.01:0,6,57	0/0:5,0:17:32.88:0,33,298	0/0:2,0:16:29.94:0,30,103	0/0:4,0:21:48.08:0,48,477	0/0:5,0:18:35.18:0,35,123	0/0:2,0:23:57.10:0,57,559	1/1:2,14:16:44.94:461,45,0	1/1:3,23:26:69.13:731,69,0	1/1:4,14:18:42.08:447,42,0	0/0:4,0:22:48.27:0,48,429	1/1:2,17:18:47.79:490,48,0	1/1:4,9:13:24.04:255,24,0	0/0:2,0:11:21.01:0,21,195	0/1:2,18:23:3.39:511,0,3	1/1:2,18:20:54.11:566,54,0	1/1:1,7:8:21.04:223,21,0
chr10	90763853	.	TACCTACACACAC	T	4154.07	PASS	AB=1.000;AC=24;AF=0.480;AN=50;BaseQRankSum=1.676;DP=392;FS=4.770;HRun=0;HaplotypeScore=117.1530;InbreedingCoeff=0.3397;MQ=81.58;MQ0=5;MQRankSum=2.153;QD=18.88;ReadPosRankSum=0.778;VQSLOD=1.6074;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:61.36:0,61,1570	0/1:8,0:7:92.70:163,0,93	0/0:32,0:24:45.07:0,45,1019	0/0:29,0:21:62.54:0,63,961	./.	./.	0/1:20,0:20:0:0,0,0	1/1:22,0:22:54.16:775,54,0	1/1:11,0:11:30.10:449,30,0	0/0:14,0:14:38.81:0,39,626	0/1:11,0:11:49.39:49,0,253	0/1:18,0:18:69.87:70,0,489	0/0:11,0:11:29.79:0,30,397	0/1:13,0:13:99:118,0,187	0/1:9,0:9:79.26:248,0,79	0/0:8,0:8:24:0,24,348	0/1:19,0:19:99:397,0,442	0/0:13,0:12:30.96:0,31,438	1/1:12,0:11:30.04:400,30,0	1/1:10,0:10:6.02:73,6,0	1/1:17,0:15:32.71:492,33,0	0/0:9,0:9:24.08:0,24,376	./.	1/1:2,24:26:5.70:227,6,0	0/0:8,0:7:9.03:0,9,144	0/1:10,0:10:30.13:283,0,30	1/1:8,0:8:21.07:315,21,0	1/1:0,0:6:3.01:95,3,0
chr10	90763855	.	CCT	C	3991.56	PASS	AB=0.529;AC=23;AF=0.460;AN=50;BaseQRankSum=1.151;DP=386;FS=0.505;HRun=0;HaplotypeScore=61.8642;InbreedingCoeff=0.8185;MQ=80.66;MQ0=5;MQRankSum=1.471;QD=25.75;ReadPosRankSum=-0.005;VQSLOD=4.1324;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:61.32:0,61,883	1/1:7,0:6:18.05:250,18,0	0/0:31,0:23:45.07:0,45,1019	0/0:29,0:21:62.54:0,63,961	./.	./.	0/0:2,18:20:0:0,0,0	1/1:1,18:19:54.16:775,54,0	1/1:10,0:10:30.10:449,30,0	0/0:15,0:15:38.94:0,39,626	0/0:11,0:11:24.04:0,24,335	0/0:17,0:17:45.03:0,45,615	0/0:10,0:10:29.79:0,30,397	0/0:12,0:12:23.99:0,24,278	1/1:7,0:7:21.05:294,21,0	0/0:8,0:8:24:0,24,348	1/1:25,0:25:43.29:589,43,0	0/0:13,0:12:30.08:0,30,436	1/1:2,10:11:30.04:400,30,0	1/1:1,8:9:6.02:73,6,0	1/1:16,1:15:32.61:488,33,0	0/0:8,0:8:24.08:0,24,376	./.	1/1:25,1:26:5.51:50,6,0	0/0:8,0:7:9.03:0,9,144	0/1:1,8:9:30.14:283,0,30	1/1:8,0:8:21.07:315,21,0	1/1:6,0:6:3:25,3,0
chr10	90763857	.	TACACACACACACACACACACAC	T	1362.74	PASS	AB=0.933;AC=13;AF=0.271;AN=48;BaseQRankSum=2.542;DP=407;FS=0.000;HRun=0;HaplotypeScore=183.2139;InbreedingCoeff=0.3954;MQ=75.59;MQ0=6;MQRankSum=-1.497;QD=16.42;ReadPosRankSum=1.575;VQSLOD=2.5977;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:27.09:0,27,2368	0/0:8,0:7:9.50:0,10,498	0/0:30,0:22:3.01:0,3,70	0/0:27,0:19:3.01:0,3,72	./.	./.	0/0:21,0:21:1.82:0,2,5	0/0:20,0:20:6.02:0,6,294	0/0:11,0:11:6.02:0,6,143	0/1:14,0:14:4.50:20,0,5	1/1:8,3:11:6.02:325,6,0	1/1:14,1:16:12.03:497,12,0	1/1:10,0:10:3.01:60,3,0	0/1:9,3:12:24.85:508,0,25	0/0:9,0:9:3.95:0,4,278	1/1:6,0:6:3.01:40,3,0	0/0:28,0:28:28.74:0,29,1530	0/0:14,0:13:4.26:0,4,40	0/0:15,0:14:8.53:0,9,50	0/0:10,0:10:6.02:0,6,171	0/0:20,0:17:13.60:0,14,311	0/1:8,0:8:0:0,0,0	./.	0/0:27,0:27:6.02:0,6,136	./.	0/0:10,0:10:7.24:0,7,67	0/0:8,0:8:6.02:0,6,125	1/1:6,0:6:3.01:48,3,0
chr10	90763897	.	C	CAG	198.26	PASS	AB=0.816;AC=6;AF=0.115;AN=52;BaseQRankSum=3.187;DP=269;FS=2.710;HRun=0;HaplotypeScore=56.2926;InbreedingCoeff=0.2890;MQ=54.97;MQ0=13;MQRankSum=1.353;QD=4.41;ReadPosRankSum=3.062;VQSLOD=1.7479;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:39.35:0,39,336	1/1:5,1:5:5.96:78,6,0	0/0:23,0:13:27.46:0,27,268	0/0:24,0:12:32.84:0,33,326	./.	0/0:4,0:4:6.46:0,6,48	0/0:5,0:5:12.87:0,13,100	0/0:19,0:19:54.69:0,55,440	0/0:6,0:5:8.98:0,9,73	0/0:5,0:5:14.91:0,15,119	0/1:8,0:8:4.51:5,0,12	0/0:12,0:12:8.72:0,9,115	0/0:3,0:3:2.60:0,3,24	0/0:10,0:9:17.74:0,18,122	1/1:7,0:7:1.91:109,2,0	0/0:3,0:3:8.98:0,9,73	0/1:10,14:24:11.86:114,0,12	0/0:9,0:8:23.82:0,24,175	0/0:7,0:7:20.87:0,21,160	0/0:6,0:6:8.71:0,9,71	0/0:7,0:4:5.21:0,5,31	0/0:3,0:1:3:0,3,25	0/0:5,0:5:2.99:0,3,24	0/0:28,0:28:29.38:0,29,229	./.	0/0:6,0:6:16.44:0,16,117	0/0:5,0:4:5.94:0,6,42	0/0:3,0:3:5.99:0,6,50
chr10	90764258	.	A	AAT	4360.88	PASS	AB=0.636;AC=43;AF=0.768;AN=56;BaseQRankSum=-2.608;DP=453;FS=14.457;HRun=0;HaplotypeScore=78.9541;InbreedingCoeff=0.6411;MQ=65.90;MQ0=10;MQRankSum=0.573;QD=13.38;ReadPosRankSum=-1.000;VQSLOD=2.8360;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:26.97:0,27,265	0/0:2,0:2:5.68:0,6,28	0/0:33,0:25:37.19:0,37,392	0/0:32,0:22:28.17:0,28,282	1/1:2,7:8:3.01:36,3,0	1/1:2,5:8:3.01:50,3,0	1/1:18,0:18:38.96:346,39,0	1/1:27,0:26:64.17:543,64,0	1/1:9,0:9:14.99:147,15,0	1/1:10,0:10:26.96:278,27,0	0/1:6,8:14:0.84:73,0,1	1/1:8,0:6:9.94:93,10,0	1/1:6,10:15:9.50:138,10,0	1/1:12,1:13:16.98:189,17,0	0/0:13,0:13:14.35:0,14,74	1/1:10,3:14:31.81:349,32,0	0/0:29,0:29:11.16:0,11,54	1/1:4,18:22:2.77:187,3,0	1/1:19,0:19:9.29:257,9,0	1/1:6,0:6:5.96:45,6,0	1/1:25,0:25:53.40:486,53,0	1/1:1,7:9:3.01:50,3,0	1/1:2,6:9:3.01:37,3,0	1/1:4,20:24:1.30:94,1,0	1/1:0,3:3:3.01:50,3,0	1/1:3,17:20:45.95:520,46,0	1/1:4,22:26:9.26:141,9,0	1/1:6,10:15:15.05:253,15,0
chr10	90764261	.	ATATATATGTGTGTGTG	A	1280.72	PASS	AB=0.517;AC=5;AF=0.089;AN=56;BaseQRankSum=3.857;DP=469;FS=6.899;HRun=0;HaplotypeScore=166.4839;InbreedingCoeff=0.4912;MQ=63.59;MQ0=12;MQRankSum=-4.833;QD=28.46;ReadPosRankSum=3.027;VQSLOD=2.0874;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:48.14:0,48,2326	1/1:0,2:2:6.02:287,6,0	0/0:28,0:20:60.18:0,60,1654	0/0:31,0:21:53.83:0,54,1298	0/0:11,0:10:2.99:0,3,219	0/0:7,0:7:3.01:0,3,214	0/0:20,0:20:51.18:0,51,1964	0/0:29,0:27:78.27:0,78,2168	0/0:9,0:9:24.07:0,24,813	0/0:11,0:11:30.10:0,30,1342	0/0:13,0:13:8.95:0,9,443	0/0:11,0:8:24.08:0,24,1204	0/0:18,0:16:14.21:0,14,608	0/0:10,0:10:24.07:0,24,901	1/1:1,12:13:15.05:694,15,0	0/0:14,0:14:36.12:0,36,1950	0/1:2,28:30:83.08:417,0,83	0/0:23,0:23:21.52:0,22,1144	0/0:20,0:20:57.11:0,57,1605	0/0:7,0:7:12.04:0,12,825	0/0:27,0:27:66.23:0,66,3050	0/0:9,0:9:2.93:0,3,190	0/0:10,0:10:6.02:0,6,296	0/0:25,0:25:15.05:0,15,835	0/0:4,0:4:6.02:0,6,403	0/0:21,0:21:57.20:0,57,2783	0/0:29,0:28:30.51:0,31,1423	0/0:16,0:15:24.07:0,24,1194
chr10	90764412	.	C	CG	8404.52	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-15.730;DP=499;FS=5.404;HRun=3;HaplotypeScore=63.7026;InbreedingCoeff=0.9830;MQ=74.56;MQ0=0;MQRankSum=-0.664;QD=33.89;ReadPosRankSum=0.239;VQSLOD=5.2871;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.17:0,57,682	0/0:4,0:4:9.03:0,9,108	0/0:21,0:21:60.10:0,60,694	0/0:14,0:14:29.78:0,30,328	1/1:5,8:13:27.08:360,27,0	1/1:0,12:12:27.09:378,27,0	1/1:1,21:22:57.19:797,57,0	1/1:4,18:22:54.09:690,54,0	1/1:1,15:16:39.13:545,39,0	0/0:18,0:18:45.14:0,45,539	0/0:15,0:15:39.09:0,39,444	0/0:18,0:18:45.14:0,45,539	0/0:16,0:16:45.12:0,45,525	0/0:11,0:11:33.10:0,33,394	0/0:21,0:21:53.95:0,54,623	0/0:20,0:20:60.18:0,60,718	0/0:29,0:29:87.22:0,87,1025	0/0:21,0:21:54.12:0,54,630	1/1:0,24:24:69.21:944,69,0	1/1:0,20:20:54.18:755,54,0	1/1:1,23:24:51.17:713,51,0	0/0:7,0:7:21.06:0,21,252	1/1:1,6:7:9.01:126,9,0	1/1:2,33:35:87.16:1190,87,0	0/0:14,0:14:39.11:0,39,457	1/1:1,21:22:60.17:817,60,0	1/1:0,18:18:48.16:670,48,0	1/1:3,10:13:30.10:419,30,0
chr10	90765367	.	GT	G	7686.42	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=6.963;DP=622;FS=3.717;HRun=8;HaplotypeScore=66.0190;InbreedingCoeff=0.9984;MQ=76.62;MQ0=0;MQRankSum=-1.002;QD=22.74;ReadPosRankSum=1.533;VQSLOD=5.6211;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:50:99:0,146,1693	1/1:0,14:14:39.06:376,39,0	0/0:29,0:24:41.61:0,42,434	0/0:15,0:14:29.75:0,30,323	1/1:5,22:27:63.09:606,63,0	1/1:1,24:25:60.10:579,60,0	1/1:3,19:22:42.06:405,42,0	1/1:5,23:28:63.09:608,63,0	1/1:1,18:19:48.08:463,48,0	0/0:24,0:24:60.17:0,60,710	0/0:13,0:13:39.12:0,39,467	0/0:21,0:21:60.18:0,60,721	0/0:24,0:24:72.18:0,72,835	0/0:18,0:18:48.12:0,48,557	1/1:3,23:26:57.09:550,57,0	0/0:20,0:20:54.14:0,54,631	1/1:3,23:26:60.09:579,60,0	0/0:22,0:22:62:0,62,729	1/1:4,8:12:24.01:225,24,0	1/1:1,16:17:30.04:290,30,0	1/1:3,15:18:42.06:405,42,0	0/0:28,0:28:72.14:0,72,828	1/1:2,20:22:60.10:579,60,0	1/1:1,19:20:48.08:463,48,0	0/0:19,0:19:51.07:0,51,584	1/1:2,28:30:50.90:775,51,0	1/1:0,25:25:62.95:608,63,0	1/1:0,7:7:18.03:174,18,0
chr10	90766072	.	AT	A	6576.05	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=12.801;DP=641;FS=22.472;HRun=9;HaplotypeScore=66.3026;InbreedingCoeff=0.9898;MQ=84.65;MQ0=0;MQRankSum=-2.100;QD=22.75;ReadPosRankSum=-1.078;VQSLOD=3.2992;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:48:99:0,126,1412	0/0:3,0:3:9.03:0,9,104	0/0:23,0:23:41.10:0,41,473	0/0:19,1:20:41.77:0,42,430	1/1:8,20:28:48:439,48,0	1/1:1,16:17:39.02:357,39,0	1/1:2,25:27:66.03:604,66,0	1/1:4,15:19:45:406,45,0	1/1:4,23:27:66.03:604,66,0	0/0:27,0:27:66.18:0,66,753	0/0:14,0:16:41.91:0,42,450	0/0:21,0:21:60.18:0,60,692	0/0:18,0:18:48.14:0,48,554	0/0:18,0:18:45.12:0,45,510	0/0:29,1:30:50.71:0,51,808	0/0:26,0:26:72.18:0,72,811	0/0:30,0:30:78.23:0,78,900	0/0:21,0:21:57.09:0,57,628	1/1:5,17:22:51:461,51,0	1/1:1,27:27:75.03:686,75,0	1/1:0,20:20:57.03:522,57,0	0/0:26,0:26:75.21:0,75,857	1/1:0,14:14:39.02:357,39,0	1/1:3,26:29:72.04:659,72,0	0/0:24,0:24:66.19:0,66,753	1/1:1,20:21:60.03:549,60,0	1/1:0,29:29:87.05:796,87,0	1/1:2,6:8:15:137,15,0
chr10	90766226	.	C	CA	2779.85	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.661;DP=628;FS=1.005;HRun=1;HaplotypeScore=58.7578;InbreedingCoeff=0.9981;MQ=60.36;MQ0=0;MQRankSum=2.419;QD=40.29;ReadPosRankSum=1.773;VQSLOD=4.2802;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1577	1/1:1,7:8:21.07:315,21,0	0/0:26,0:23:60.11:0,60,750	0/0:19,0:15:36.11:0,36,451	0/0:19,0:19:48.13:0,48,595	0/0:17,0:17:45.11:0,45,554	0/0:33,0:33:93.26:0,93,1165	0/0:38,0:38:99:0,111,1405	0/0:29,0:29:87.26:0,87,1102	0/0:19,0:19:54.18:0,54,700	0/0:22,0:22:60.18:0,60,764	0/0:23,0:23:69.22:0,69,895	0/0:10,0:10:30.10:0,30,385	0/0:16,0:16:48.16:0,48,623	1/1:0,29:29:78.26:1169,78,0	0/0:20,0:20:59.55:0,60,735	1/1:0,32:32:96.33:1439,96,0	0/0:14,0:14:39.13:0,39,506	0/0:22,0:21:57.13:0,57,706	0/0:19,0:19:57.19:0,57,740	0/0:35,0:35:99:0,102,1323	0/0:19,0:19:57.16:0,57,713	0/0:24,0:24:69.22:0,69,894	0/0:19,0:18:54.18:0,54,700	0/0:14,0:13:39.11:0,39,490	0/0:25,0:25:72.23:0,72,923	0/0:24,0:24:72.23:0,72,934	0/0:11,0:11:30.10:0,30,389
chr10	90766562	.	AG	A	1377.26	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.029;DP=391;FS=1.337;HRun=2;HaplotypeScore=49.1360;InbreedingCoeff=0.9770;MQ=73.27;MQ0=1;MQRankSum=-3.096;QD=34.43;ReadPosRankSum=1.851;VQSLOD=3.7166;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,1:20:23.55:0,24,774	1/1:0,5:5:15.05:195,15,0	0/0:21,0:18:51.17:0,51,764	0/0:19,1:17:38.84:0,39,522	0/0:14,0:14:39.13:0,39,578	0/0:14,0:14:24.08:0,24,354	0/0:16,0:16:48.14:0,48,672	0/0:17,0:17:51.17:0,51,759	0/0:11,0:11:27.09:0,27,394	0/0:19,0:19:51.16:0,51,764	0/0:17,0:17:48.16:0,48,712	0/0:9,0:9:24.04:0,24,334	0/0:8,0:8:24.08:0,24,344	0/0:9,0:9:27.09:0,27,405	1/1:0,17:17:48.16:623,48,0	0/0:10,0:10:30.10:0,30,429	1/1:0,18:18:54.18:700,54,0	0/0:12,0:12:33.11:0,33,490	0/0:13,0:13:39.13:0,39,576	0/0:11,0:11:33.11:0,33,489	0/0:17,0:17:42.14:0,42,618	0/0:8,0:8:12.04:0,12,180	0/0:14,0:14:30.10:0,30,439	0/0:12,0:12:24.08:0,24,357	0/0:8,0:8:21.07:0,21,314	0/0:19,0:19:54.18:0,54,809	0/0:15,0:14:39.13:0,39,584	0/0:17,0:17:48.16:0,48,713
chr10	90766921	.	C	CT	476.09	PASS	AB=1.000;AC=7;AF=0.135;AN=52;BaseQRankSum=1.500;DP=396;FS=2.316;HRun=2;HaplotypeScore=45.2399;InbreedingCoeff=0.7675;MQ=42.67;MQ0=36;MQRankSum=2.996;QD=9.92;ReadPosRankSum=2.880;VQSLOD=1.7405;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:29:43.32:0,43,355	1/1:0,8:8:9.03:122,9,0	./.	0/0:3,0:3:2.60:0,3,10	0/0:17,0:14:13.85:0,14,89	0/0:18,0:16:9.48:0,9,46	0/0:8,0:7:11.75:0,12,72	0/0:26,0:20:51.74:0,52,328	0/0:8,0:6:5.81:0,6,32	0/0:23,0:21:53.37:0,53,414	0/0:21,0:19:31.82:0,32,247	0/0:19,0:18:41.78:0,42,345	0/0:8,0:8:20.80:0,21,158	0/0:8,0:8:17.59:0,18,118	1/1:11,3:13:28.97:245,29,0	0/0:13,0:12:20.74:0,21,149	1/1:17,5:17:26.38:242,26,0	0/0:19,0:14:23.29:0,23,194	0/0:24,0:20:47.57:0,48,323	0/0:12,0:10:11.66:0,12,75	0/1:4,0:3:0:0,0,0	0/0:5,0:5:14.65:0,15,94	0/0:8,0:7:14.59:0,15,84	./.	0/0:15,0:14:35.79:0,36,305	0/0:15,0:14:29.41:0,29,195	0/0:16,0:12:5.44:0,5,27	0/0:18,0:15:19.59:0,20,110
chr10	90767769	.	T	TAATA	105.67	PASS	AB=0.900;AC=4;AF=0.080;AN=50;BaseQRankSum=2.815;DP=387;FS=1.630;HRun=0;HaplotypeScore=108.9703;InbreedingCoeff=0.2677;MQ=51.63;MQ0=7;MQRankSum=-3.697;QD=3.64;ReadPosRankSum=-2.063;VQSLOD=1.7477;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:72.15:0,72,1117	1/1:0,1:1:3.01:76,3,0	./.	./.	0/0:31,0:29:57.17:0,57,910	0/0:18,0:18:42.13:0,42,683	0/0:12,0:12:24.05:0,24,340	0/0:19,0:12:24.08:0,24,400	0/0:12,0:12:15.05:0,15,248	0/0:7,0:7:15.04:0,15,235	0/0:17,0:16:36.12:0,36,610	0/0:6,0:6:15.05:0,15,255	0/0:4,0:4:9.02:0,9,129	0/0:7,0:5:12.04:0,12,203	0/1:8,0:8:24.10:24,0,166	0/0:8,0:8:24.08:0,24,417	0/1:15,5:18:99:107,0,382	0/0:25,0:24:63.22:0,63,1095	0/0:24,0:22:54.18:0,54,933	0/0:24,0:23:48.16:0,48,830	0/0:17,0:15:30.10:0,30,511	./.	0/0:10,0:9:9.03:0,9,156	0/0:9,0:7:18.06:0,18,312	0/0:12,0:12:21.07:0,21,365	0/0:32,0:32:87.30:0,87,1447	0/0:16,0:16:33.06:0,33,508	0/0:14,0:14:30.10:0,30,520
chr10	90767781	.	CT	C	3905.02	PASS	AC=26;AF=0.481;AN=54;BaseQRankSum=10.321;DP=366;FS=3.941;HRun=3;HaplotypeScore=77.1367;InbreedingCoeff=0.9019;MQ=53.54;MQ0=5;MQRankSum=-0.191;QD=18.25;ReadPosRankSum=2.446;VQSLOD=3.4160;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:51.15:0,51,864	0/0:1,0:1:3:0,3,28	0/0:6,0:5:11.06:0,11,118	0/0:3,0:2:3.01:0,3,38	1/1:26,0:26:59.77:465,60,0	1/1:18,1:19:50.82:405,51,0	1/1:7,1:9:3.72:136,4,0	1/1:12,0:10:20.95:165,21,0	1/1:12,0:12:11.93:86,12,0	0/0:5,0:5:14.52:0,15,126	0/0:17,0:16:40.26:0,40,371	0/0:7,0:7:21.04:0,21,219	0/0:5,0:5:12.02:0,12,118	0/0:6,0:5:15.03:0,15,159	0/0:4,0:4:11.84:0,12,97	0/0:9,0:9:27.03:0,27,258	0/0:20,0:18:42.11:0,42,350	0/0:28,0:27:66.08:0,66,633	1/1:21,1:21:59.69:458,60,0	1/1:19,1:19:50.75:389,51,0	1/1:16,0:15:32.85:253,33,0	./.	1/1:8,0:8:17.94:141,18,0	1/1:9,0:9:23.92:188,24,0	0/0:12,0:12:27.05:0,27,264	1/1:32,0:32:67.77:674,68,0	1/1:16,0:16:32:266,32,0	1/1:13,0:13:35.87:279,36,0
chr10	90767783	.	TTA	T	7793.78	PASS	AC=26;AF=0.481;AN=54;BaseQRankSum=6.428;DP=359;FS=3.210;HRun=0;HaplotypeScore=69.5760;InbreedingCoeff=0.8711;MQ=56.95;MQ0=4;MQRankSum=0.183;QD=37.65;ReadPosRankSum=2.932;VQSLOD=7.2161;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:71.88:0,72,1241	0/0:1,0:1:3.01:0,3,41	0/0:6,0:6:8.53:0,9,191	0/0:4,0:3:3.01:0,3,39	1/1:0,25:25:60.20:958,60,0	1/1:1,18:19:49.98:767,50,0	1/1:2,7:9:2.37:227,2,0	1/1:2,8:10:3.43:317,3,0	1/1:0,10:10:12.04:185,12,0	0/0:5,0:5:15.04:0,15,190	0/0:18,0:17:45.01:0,45,556	0/0:7,0:7:21.06:0,21,276	0/0:6,0:6:12.04:0,12,171	0/0:6,0:5:15.04:0,15,216	0/0:4,0:4:12.04:0,12,150	0/0:9,0:9:27.06:0,27,364	0/0:20,0:18:40.01:0,40,530	0/0:27,0:26:66.17:0,66,871	1/1:1,20:21:63:862,63,0	1/1:1,18:18:51.11:783,51,0	1/1:0,16:15:33.11:524,33,0	./.	1/1:0,8:8:18.06:289,18,0	1/1:1,8:9:24.08:385,24,0	0/0:11,0:11:27.08:0,27,369	1/1:1,31:32:54.16:1362,54,0	1/1:0,16:16:32.28:561,32,0	1/1:0,13:13:36.12:574,36,0
chr10	90767784	.	T	TA	1691.05	PASS	AB=0.670;AC=20;AF=0.370;AN=54;BaseQRankSum=-9.173;DP=364;FS=16.814;HRun=11;HaplotypeScore=87.8314;InbreedingCoeff=0.7441;MQ=58.47;MQ0=4;MQRankSum=2.115;QD=14.33;ReadPosRankSum=0.086;VQSLOD=2.3304;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:61.79:0,62,468	1/1:0,0:1:2.84:14,3,0	0/0:8,0:7:8.84:0,9,56	0/0:3,0:3:2.96:0,3,23	0/0:25,0:25:44.04:0,44,134	0/0:19,0:19:37.47:0,37,117	0/0:9,0:9:13.70:0,14,43	0/0:10,0:10:18.13:0,18,57	0/0:10,0:10:8.15:0,8,26	1/1:1,6:7:15.02:145,15,0	1/1:4,13:17:26.21:299,26,0	1/1:3,4:7:12.02:122,12,0	1/1:0,6:6:12.02:122,12,0	0/1:2,4:5:11.21:79,0,11	1/1:3,0:4:2.84:14,3,0	1/1:2,8:10:24.05:244,24,0	0/1:13,0:18:5.10:55,0,5	1/1:5,23:27:54.11:548,54,0	0/0:21,0:21:37.01:0,37,112	0/0:19,0:18:35.34:0,35,107	0/0:16,0:15:24.42:0,24,73	./.	0/0:8,0:8:13.32:0,13,40	0/0:9,0:9:17.76:0,18,54	1/1:1,10:11:24.05:244,24,0	0/0:32,0:32:64.63:0,65,201	0/0:16,0:16:26.60:0,27,81	0/0:13,0:13:26.61:0,27,82
chr10	90767943	.	AAAAG	A	1343.03	PASS	AB=0.975;AC=26;AF=0.464;AN=56;BaseQRankSum=9.004;DP=375;FS=7.101;HRun=0;HaplotypeScore=107.8960;InbreedingCoeff=0.6388;MQ=36.29;MQ0=21;MQRankSum=-7.082;QD=7.18;ReadPosRankSum=0.726;VQSLOD=2.0338;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:30:60.35:0,60,618	1/1:2,2:3:5.14:43,5,0	0/0:28,0:3:5.99:0,6,48	0/0:16,0:5:12.01:0,12,149	1/1:20,0:19:22.44:187,22,0	1/1:18,0:17:7.57:103,8,0	0/1:8,0:7:4.70:46,0,5	1/1:19,0:18:43.90:423,44,0	1/1:14,1:13:11.25:62,11,0	0/0:13,0:13:22.86:0,23,196	0/0:9,1:10:11.77:0,12,108	0/0:8,0:8:20.16:0,20,208	0/0:12,0:12:24.73:0,25,201	0/0:11,0:9:23.22:0,23,243	0/1:8,1:7:8.09:49,0,8	0/0:12,0:11:6.32:0,6,187	0/0:10,0:9:12:0,12,133	0/0:16,0:15:32.93:0,33,348	1/1:15,1:14:19.41:200,19,0	0/1:14,0:14:2.77:38,0,3	0/1:9,0:7:3.79:23,0,4	0/0:6,0:6:11.39:0,11,75	1/1:8,0:7:1.98:51,2,0	1/1:8,0:8:5.51:61,6,0	0/0:13,0:12:26.42:0,26,274	1/1:14,0:13:12.07:181,12,0	1/1:19,0:15:16.18:63,16,0	1/1:6,0:5:4.66:12,5,0
chr10	90767945	.	AAG	A	1362.89	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=9.207;DP=355;FS=42.399;HRun=0;HaplotypeScore=93.9620;InbreedingCoeff=0.5801;MQ=36.81;MQ0=21;MQRankSum=-7.804;QD=6.37;ReadPosRankSum=1.487;VQSLOD=1.5105;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:28:13.92:0,14,377	1/1:3,0:3:8.87:60,9,0	0/0:29,0:3:5.99:0,6,48	0/0:16,0:5:11.75:0,12,102	1/1:19,0:19:35.53:187,36,0	1/1:17,0:16:14.88:109,15,0	1/1:8,0:7:11.01:67,11,0	1/1:16,0:15:42.94:258,43,0	1/1:15,0:13:12.28:68,12,0	0/1:13,0:13:8.54:9,0,87	0/1:10,0:10:1.65:2,0,64	0/0:9,0:9:13.80:0,14,149	0/0:10,1:11:11.71:0,12,157	0/0:11,0:9:18.36:0,18,151	1/1:10,0:8:20.78:151,21,0	0/1:12,0:11:9.71:10,0,110	0/0:9,0:8:8.62:0,9,73	0/0:14,0:13:31.42:0,31,249	1/1:14,0:12:28.65:158,29,0	1/1:14,0:14:2.40:63,2,0	1/1:8,0:7:10.29:53,10,0	0/1:7,0:7:19.23:19,0,37	1/1:8,0:7:8.94:46,9,0	1/1:8,0:8:8.39:69,8,0	0/0:9,2:10:0.34:0,0,122	1/1:13,0:12:25.04:150,25,0	1/1:14,0:12:13.76:71,14,0	1/1:5,0:4:2.66:6,3,0
chr10	90767947	.	G	GAACA	2047.03	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=10.164;DP=373;FS=26.439;HRun=0;HaplotypeScore=117.1439;InbreedingCoeff=0.8285;MQ=36.61;MQ0=20;MQRankSum=-9.100;QD=9.14;ReadPosRankSum=0.353;VQSLOD=0.6961;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:22:33.06:0,33,506	1/1:4,0:4:11.07:177,11,0	0/0:30,0:4:3.01:0,3,49	0/1:17,0:6:31.71:32,0,88	1/1:19,0:19:21.37:169,21,0	1/1:20,0:18:39.33:207,39,0	1/1:9,0:8:9.35:72,9,0	1/1:22,0:21:23.42:158,23,0	1/1:15,0:13:23.08:102,23,0	0/0:13,0:13:15:0,15,209	0/0:9,0:9:18.02:0,18,258	0/0:8,0:8:18.06:0,18,288	0/0:11,0:11:27.09:0,27,413	0/0:10,0:8:15.05:0,15,243	1/1:9,0:7:12.04:244,12,0	0/0:11,0:11:26.99:0,27,377	1/1:4,5:9:5.83:143,6,0	0/0:14,0:13:32.56:0,33,467	1/1:16,0:14:21.26:156,21,0	1/1:18,0:18:35.49:203,35,0	1/1:10,0:8:17.64:112,18,0	0/0:7,0:7:11.94:0,12,132	1/1:10,0:9:16.40:102,16,0	1/1:8,0:8:6.60:54,7,0	0/0:11,0:10:21.07:0,21,315	1/1:16,0:15:32.56:181,33,0	1/1:14,0:12:26.53:128,27,0	1/1:7,0:5:7.59:24,8,0
chr10	90767966	.	C	CAA	5996.78	PASS	AB=0.854;AC=26;AF=0.464;AN=56;BaseQRankSum=12.512;DP=404;FS=14.324;HRun=3;HaplotypeScore=97.4342;InbreedingCoeff=0.6005;MQ=47.15;MQ0=9;MQRankSum=-11.205;QD=25.41;ReadPosRankSum=3.133;VQSLOD=2.6501;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.04:0,57,705	0/1:5,0:5:11.15:11,0,73	0/0:25,0:11:30.08:0,30,371	0/0:20,0:10:26.98:0,27,338	1/1:8,17:23:20.22:599,20,0	1/1:5,17:20:19.27:742,19,0	1/1:5,7:11:20.96:255,21,0	0/1:13,6:20:2.65:470,0,3	1/1:3,13:16:30.10:488,30,0	0/0:12,0:12:33.10:0,33,428	0/0:8,0:8:21.04:0,21,270	0/0:10,0:10:30.10:0,30,415	0/0:12,0:12:36.12:0,36,501	0/0:9,0:8:24.07:0,24,317	0/1:8,0:7:8.49:8,0,100	0/0:13,0:13:30.57:0,31,419	0/1:14,0:13:13.52:14,0,228	0/0:15,0:15:45.15:0,45,627	0/1:14,6:20:99:390,0,127	1/1:8,12:22:56.45:782,56,0	0/1:3,5:7:30.46:128,0,30	0/0:11,0:11:26.36:0,26,318	1/1:3,6:10:27.08:399,27,0	1/1:1,6:9:17.76:248,18,0	0/0:11,0:10:30.10:0,30,416	1/1:5,17:19:57.10:811,57,0	1/1:4,11:13:15.54:477,16,0	1/1:2,3:5:12.01:173,12,0
chr10	90767969	.	AC	A	1901.14	PASS	AB=0.944;AC=25;AF=0.446;AN=56;BaseQRankSum=13.006;DP=414;FS=18.447;HRun=1;HaplotypeScore=101.7420;InbreedingCoeff=0.7913;MQ=47.88;MQ0=10;MQRankSum=-11.963;QD=8.84;ReadPosRankSum=1.431;VQSLOD=-0.0473;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.13:0,60,769	0/1:5,0:5:3.92:4,0,122	0/0:27,0:11:30.04:0,30,378	0/0:19,0:9:27.08:0,27,355	1/1:22,3:23:15.08:201,15,0	1/1:20,3:21:28.67:206,29,0	1/1:11,1:11:19.47:111,19,0	1/1:15,5:20:15.04:239,15,0	1/1:15,1:15:27.18:122,27,0	0/0:14,0:14:42.12:0,42,533	0/0:9,0:9:25.30:0,25,305	0/0:12,0:12:36.06:0,36,467	0/0:13,0:13:39.10:0,39,532	0/0:8,0:8:24.08:0,24,335	0/0:9,0:8:24.05:0,24,273	0/0:13,0:13:30.41:0,30,446	0/0:14,0:13:30.06:0,30,369	0/0:17,0:17:51.14:0,51,680	0/1:16,4:20:93.84:143,0,94	1/1:18,3:21:55.29:291,55,0	0/1:8,0:7:13.94:45,0,14	0/0:11,0:11:20.60:0,21,367	1/1:7,3:10:25.07:134,25,0	1/1:8,1:9:16.76:96,17,0	0/0:11,0:10:30.10:0,30,408	1/1:17,5:19:53.92:317,54,0	1/1:14,3:15:21.65:161,22,0	1/1:6,1:5:10.94:49,11,0
chr10	90768076	.	T	TG	2149.49	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=15.186;DP=582;FS=0.664;HRun=2;HaplotypeScore=81.8825;InbreedingCoeff=0.2549;MQ=70.66;MQ0=2;MQRankSum=0.421;QD=6.23;ReadPosRankSum=3.102;VQSLOD=0.9183;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:90.27:0,90,1098	1/1:5,0:5:12:108,12,0	0/0:15,0:14:39.02:0,39,413	0/0:19,0:19:40.22:0,40,346	0/1:32,0:32:49.53:130,0,50	1/1:15,0:15:11.22:99,11,0	0/1:15,0:15:8.77:62,0,9	0/1:31,0:31:99:125,0,119	1/1:18,0:17:17.92:137,18,0	0/0:23,0:23:69.22:0,69,853	0/0:21,0:21:57.18:0,57,704	0/0:13,0:13:36.08:0,36,409	0/0:21,0:21:57.15:0,57,679	0/0:14,0:14:42.12:0,42,506	1/1:14,0:14:39.01:349,39,0	0/0:22,0:22:63.17:0,63,744	1/1:20,4:23:66.06:647,66,0	0/0:24,0:24:69.16:0,69,835	0/1:26,0:25:11.64:98,0,12	0/1:26,0:26:74.74:75,0,111	0/1:32,0:32:38.07:102,0,38	0/0:13,0:13:36.11:0,36,445	0/1:21,0:21:18.96:55,0,19	0/1:28,0:28:48.72:102,0,49	0/0:16,0:16:48.13:0,48,571	0/1:23,0:23:72.67:73,0,92	0/1:26,0:24:99:100,0,118	1/1:9,0:9:21.78:81,22,0
chr10	90768078	.	G	GA	7910.62	PASS	AB=0.578;AC=31;AF=0.554;AN=56;BaseQRankSum=-7.608;DP=585;FS=1.085;HRun=9;HaplotypeScore=63.5352;InbreedingCoeff=0.9358;MQ=71.49;MQ0=2;MQRankSum=-2.996;QD=22.73;ReadPosRankSum=-0.047;VQSLOD=5.5434;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:89.95:0,90,776	1/1:0,0:5:11.73:69,12,0	0/0:16,0:15:23.63:0,24,229	0/0:19,0:19:17.35:0,17,198	1/1:5,27:33:60.91:851,61,0	1/1:1,16:17:39.11:431,39,0	1/1:2,13:15:33.09:365,33,0	1/1:5,26:31:6.05:732,6,0	1/1:1,17:17:48.13:531,48,0	0/0:23,0:23:68.97:0,69,594	0/0:20,0:20:56.98:0,57,495	0/0:13,0:13:26.98:0,27,234	0/0:21,0:21:53.88:0,54,469	0/0:14,0:14:38.99:0,39,338	1/1:0,0:13:38:220,38,0	0/0:23,0:23:56.96:0,57,492	1/1:4,1:24:64.53:389,65,0	0/0:23,0:23:65.99:0,66,573	1/1:4,19:22:37.11:637,37,0	1/1:8,19:27:25.09:505,25,0	1/1:4,30:34:46.14:737,46,0	0/0:13,0:13:35.99:0,36,312	1/1:5,14:19:42.05:428,42,0	1/1:7,22:29:63.17:693,63,0	0/0:17,0:17:41.98:0,42,365	1/1:4,19:24:13.90:585,14,0	0/1:7,19:24:0.98:441,0,1	1/1:0,9:9:27.07:299,27,0
chr10	90768847	.	GA	G	1319.06	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.572;DP=629;FS=2.022;HRun=4;HaplotypeScore=59.4659;InbreedingCoeff=0.9970;MQ=87.49;MQ0=0;MQRankSum=-2.759;QD=27.48;ReadPosRankSum=2.082;VQSLOD=3.0716;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1523	1/1:0,8:8:18.06:216,18,0	0/0:27,0:27:81.27:0,81,1106	0/0:20,0:20:53.36:0,53,675	0/0:24,0:24:66.21:0,66,903	0/0:28,0:28:75.24:0,75,1027	0/0:23,0:23:69.23:0,69,960	0/0:25,0:25:69.23:0,69,963	0/0:17,0:17:51.15:0,51,681	0/0:32,0:32:93.30:0,93,1273	0/0:28,0:28:78.24:0,78,1051	0/0:11,0:11:33.11:0,33,462	0/0:17,0:17:51.17:0,51,710	0/0:19,0:19:57.16:0,57,762	1/1:0,21:21:54.17:647,54,0	0/0:18,0:18:54.18:0,54,756	1/1:2,17:19:51.13:597,51,0	0/0:15,0:15:42.10:0,42,560	0/0:22,0:22:66.19:0,66,891	0/0:33,0:33:90.29:0,90,1241	0/0:28,0:28:81.27:0,81,1133	0/0:29,0:29:84.27:0,84,1161	0/0:27,0:27:81.26:0,81,1113	0/0:20,0:19:60.20:0,60,840	0/0:22,0:22:63.21:0,63,878	0/0:17,0:17:45.15:0,45,629	0/0:28,0:28:81.21:0,81,1077	0/0:13,0:13:39.10:0,39,507
chr10	90769307	.	GA	G	14185.55	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=12.620;DP=716;FS=0.277;HRun=3;HaplotypeScore=72.6150;InbreedingCoeff=0.9817;MQ=83.15;MQ0=0;MQRankSum=-2.081;QD=34.10;ReadPosRankSum=2.410;VQSLOD=5.4541;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1532	1/1:0,10:10:30.09:371,30,0	0/0:15,0:15:33.03:0,33,394	0/0:24,0:24:69.21:0,69,911	1/1:0,32:32:93.28:1137,93,0	1/1:0,8:8:24.08:298,24,0	1/1:0,34:34:99:1227,99,0	1/1:0,19:19:57.12:657,57,0	1/1:2,22:24:57.18:706,57,0	0/0:22,0:22:57.19:0,57,811	0/0:12,0:12:36.12:0,36,518	0/0:38,0:38:99:0,111,1596	0/0:29,0:29:87.26:0,87,1213	0/0:36,0:36:99:0,105,1471	1/1:0,39:39:99:1338,108,0	0/0:33,0:33:99:0,99,1384	1/1:0,49:49:99:1673,135,0	0/0:26,0:26:78.21:0,78,1080	1/1:0,22:22:66.04:776,66,0	1/1:3,11:14:33.10:408,33,0	1/1:1,55:56:99:1971,159,0	0/0:16,0:16:48.15:0,48,664	1/1:0,17:17:42.13:521,42,0	1/1:1,33:34:93.29:1153,93,0	0/0:12,0:12:36.11:0,36,496	1/1:1,15:16:4.92:501,5,0	1/1:0,31:31:87.27:1078,87,0	1/1:0,11:11:30.09:372,30,0
chr10	90769828	.	TG	T	2422.73	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.157;DP=713;FS=1.517;HRun=3;HaplotypeScore=82.5836;InbreedingCoeff=0.9933;MQ=74.89;MQ0=0;MQRankSum=-1.961;QD=31.88;ReadPosRankSum=2.998;VQSLOD=4.0458;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,1432	1/1:0,10:10:30.09:371,30,0	0/0:28,0:25:72.14:0,72,954	0/0:23,0:22:50.74:0,51,709	0/0:17,0:17:45.15:0,45,645	0/0:20,0:20:60.19:0,60,848	0/0:39,0:39:99:0,114,1637	0/0:23,0:23:63.17:0,63,869	0/0:26,0:26:78.26:0,78,1123	0/0:26,0:26:78.26:0,78,1115	0/0:8,0:8:24.08:0,24,345	0/0:18,0:18:54.17:0,54,759	0/0:16,0:16:48.16:0,48,691	0/0:30,0:30:87.27:0,87,1215	1/1:1,23:24:63.20:781,63,0	0/0:17,0:17:51.17:0,51,730	1/1:2,40:42:99:1413,114,0	0/0:37,0:37:99:0,108,1553	0/0:24,0:24:69.22:0,69,977	0/0:12,0:12:30.56:0,31,414	0/0:104,0:104:99:0,304,4249	0/0:15,0:15:45.14:0,45,630	0/0:6,0:6:15.05:0,15,216	0/0:40,0:40:99:0,117,1667	0/0:15,0:15:42.14:0,42,604	0/0:16,0:16:48.16:0,48,690	0/0:23,0:23:51.22:0,51,932	0/0:17,0:17:51.17:0,51,733
chr10	90771730	.	G	GTT	1807.77	PASS	AB=0.865;AC=30;AF=0.625;AN=48;BaseQRankSum=0.128;DP=444;FS=12.720;HRun=8;HaplotypeScore=76.3836;InbreedingCoeff=0.0818;MQ=54.31;MQ0=33;MQRankSum=-2.434;QD=5.53;ReadPosRankSum=1.387;VQSLOD=-0.7268;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:38,7:39:99:171,0,610	./.	0/0:41,0:12:20.46:0,20,163	0/0:44,0:14:14.34:0,14,117	1/1:5,3:4:3.01:48,3,0	./.	./.	1/1:8,9:14:24.08:377,24,0	1/1:2,2:3:3.01:48,3,0	0/1:25,3:23:50.57:51,0,440	0/1:13,3:13:62.04:62,0,267	0/0:13,0:13:33.08:0,33,368	0/1:22,2:21:15.87:16,0,294	0/0:14,0:14:27.06:0,27,301	1/1:8,0:4:2.44:7,2,0	0/1:27,6:30:99:221,0,436	1/1:4,2:3:3.01:48,3,0	0/1:27,4:28:23.02:23,0,638	1/1:7,2:4:6.02:95,6,0	1/1:4,0:3:3.01:40,3,0	1/1:4,3:5:8.99:115,9,0	0/1:19,5:19:99:139,0,379	1/1:2,6:2:6.02:95,6,0	1/1:3,4:5:5.96:67,6,0	0/1:28,5:25:99:115,0,534	0/0:1,0:1:3.01:0,3,33	1/1:5,6:6:15.05:229,15,0	./.
chr10	90771761	.	GTT	G	2069.83	PASS	AB=0.788;AC=19;AF=0.396;AN=48;BaseQRankSum=-1.839;DP=395;FS=31.569;HRun=16;HaplotypeScore=59.3311;InbreedingCoeff=0.3539;MQ=40.88;MQ0=34;MQRankSum=1.204;QD=9.81;ReadPosRankSum=5.009;VQSLOD=0.2778;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:38:87.64:0,88,874	0/0:4,0:2:3:0,3,25	0/0:41,0:4:6.01:0,6,60	0/0:38,0:5:4.96:0,5,22	0/1:13,0:7:10.73:11,0,38	./.	0/0:1,0:1:0.89:0,1,2	0/0:8,0:3:2.98:0,3,21	0/0:2,0:1:2.98:0,3,22	0/1:11,13:20:22.14:275,0,22	1/1:8,8:13:12.55:103,13,0	0/1:8,9:16:3.29:233,0,3	1/1:9,3:11:2.72:109,3,0	1/1:6,5:12:12.07:96,12,0	0/0:10,0:7:11.97:0,12,108	1/1:9,15:24:50.77:438,51,0	./.	0/1:13,14:26:5.92:339,0,6	0/1:3,0:3:0.62:1,0,3	./.	0/0:5,0:2:2.60:0,3,10	1/1:12,15:20:12.68:267,13,0	0/0:5,0:4:2.98:0,3,21	0/0:5,0:3:2.99:0,3,23	1/1:12,16:22:38.49:325,38,0	1/1:1,1:2:2.99:25,3,0	0/0:7,0:3:5.34:0,5,24	./.
chr10	90771768	.	T	TG	52.75	PASS	AB=1.000;AC=14;AF=0.292;AN=48;BaseQRankSum=4.294;DP=409;FS=36.818;HRun=0;HaplotypeScore=58.4751;InbreedingCoeff=0.5610;MQ=39.44;MQ0=64;MQRankSum=-0.383;QD=0.93;ReadPosRankSum=-0.558;VQSLOD=0.0588;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:35:75.29:0,75,924	0/0:5,0:3:3.01:0,3,41	0/0:42,0:2:6.02:0,6,78	0/0:37,0:4:10.30:0,10,76	1/1:4,9:7:9.02:102,9,0	./.	0/0:4,0:1:0.89:0,1,2	1/1:8,0:3:2.74:12,3,0	1/1:3,0:1:2.68:11,3,0	0/0:25,0:20:26.17:0,26,340	0/0:19,0:13:28.13:0,28,216	0/0:18,0:16:44.82:0,45,362	0/0:12,0:10:19.40:0,19,198	0/0:11,0:10:23.11:0,23,170	0/0:12,0:8:11.99:0,12,122	0/0:27,0:23:45.87:0,46,456	./.	0/0:32,0:28:53.22:0,53,503	0/1:3,0:3:5.14:5,0,7	./.	0/1:6,0:2:4.86:5,0,14	0/0:26,0:21:28.03:0,28,357	1/1:9,0:4:2.90:16,3,0	1/1:5,0:3:5.19:20,5,0	0/0:25,0:19:44.89:0,45,358	0/0:2,0:1:2.99:0,3,24	1/1:10,0:4:5.16:20,5,0	./.
chr10	90772398	.	ACAG	A	10820.42	PASS	AB=0.533;AC=31;AF=0.554;AN=56;BaseQRankSum=12.554;DP=568;FS=18.991;HRun=0;HaplotypeScore=88.0123;InbreedingCoeff=0.9264;MQ=83.62;MQ0=0;MQRankSum=-5.809;QD=37.44;ReadPosRankSum=5.020;VQSLOD=4.2883;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,2104	1/1:0,8:8:18.06:305,18,0	0/0:29,0:26:74.54:0,75,1290	0/0:32,0:31:51.09:0,51,1102	1/1:0,14:14:39.09:612,39,0	1/1:0,16:16:36.12:612,36,0	1/1:1,12:13:30.10:509,30,0	1/1:2,18:20:54.08:761,54,0	1/1:0,12:12:30.10:510,30,0	0/0:22,0:22:66.23:0,66,1475	0/0:19,0:19:54.15:0,54,1126	0/0:19,0:19:54.17:0,54,1161	0/0:20,0:20:57.20:0,57,1269	0/0:17,0:17:51.13:0,51,992	1/1:0,18:18:33.11:559,33,0	0/0:18,0:18:51.15:0,51,1025	1/1:1,25:26:60.15:988,60,0	0/0:18,0:18:48.14:0,48,1056	1/1:2,15:17:45.09:614,45,0	1/1:1,23:24:53.24:887,53,0	1/1:1,20:21:39.13:651,39,0	0/0:30,0:30:84.25:0,84,1773	1/1:1,16:17:41.86:681,42,0	1/1:1,21:22:51.17:855,51,0	0/0:20,0:20:60.16:0,60,1244	0/1:3,21:24:70.61:898,0,71	1/1:0,20:20:33.11:561,33,0	1/1:0,17:17:48.16:816,48,0
chr10	90773020	.	C	CT	15954.05	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=18.149;DP=651;FS=14.269;HRun=1;HaplotypeScore=91.6532;InbreedingCoeff=0.9911;MQ=94.79;MQ0=0;MQRankSum=-5.199;QD=42.89;ReadPosRankSum=2.522;VQSLOD=3.4842;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1635	1/1:0,10:10:21.07:336,21,0	0/0:31,0:32:85.96:0,86,1158	0/0:27,0:27:77.83:0,78,1017	1/1:2,20:22:54.18:842,54,0	1/1:0,31:31:90.31:1439,90,0	1/1:1,27:28:72.25:1143,72,0	1/1:1,17:18:54.18:854,54,0	1/1:0,25:25:66.23:1055,66,0	0/0:29,0:29:87.29:0,87,1199	0/0:19,0:19:57.19:0,57,794	0/0:17,0:17:48.16:0,48,671	0/0:27,0:27:75.21:0,75,1025	0/0:19,0:19:51.17:0,51,713	1/1:1,24:25:72.25:1151,72,0	0/0:20,0:20:60.20:0,60,839	1/1:0,26:26:63.21:1007,63,0	0/0:20,0:20:57.19:0,57,796	1/1:1,13:14:42.14:672,42,0	1/1:0,26:26:75.26:1199,75,0	1/1:0,31:31:87.30:1391,87,0	0/0:17,0:17:51.17:0,51,713	1/1:0,17:17:51.17:815,51,0	1/1:1,30:31:75.26:1199,75,0	0/0:13,0:13:39.13:0,39,545	1/1:3,20:23:24.27:933,24,0	1/1:3,39:42:99:1774,111,0	1/1:0,3:3:9.03:144,9,0
chr10	90773575	.	TG	T	11343.43	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=20.772;DP=734;FS=13.922;HRun=5;HaplotypeScore=154.8464;InbreedingCoeff=0.9981;MQ=66.45;MQ0=1;MQRankSum=-1.586;QD=28.57;ReadPosRankSum=0.883;VQSLOD=2.8313;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,169,2232	1/1:0,7:7:18.05:197,18,0	0/0:39,0:36:84.05:0,84,1083	0/0:33,0:33:80.31:0,80,1110	1/1:0,23:23:66.03:699,66,0	1/1:1,18:19:48.13:533,48,0	1/1:1,15:16:45.12:493,45,0	1/1:3,21:24:63.16:690,63,0	1/1:1,18:19:45.12:499,45,0	0/0:28,0:28:81.21:0,81,1057	0/0:17,0:17:51.17:0,51,693	0/0:28,0:28:75.25:0,75,1025	0/0:25,0:25:75.21:0,75,975	0/0:28,0:28:81.24:0,81,1076	1/1:0,43:42:99:1297,117,0	0/0:17,1:18:20.57:0,21,664	1/1:2,26:28:62.14:691,62,0	0/0:17,0:16:42.13:0,42,555	1/1:3,23:26:66.07:689,66,0	1/1:1,28:28:75.11:804,75,0	1/1:1,31:32:84.23:929,84,0	0/0:29,0:29:84.28:0,84,1144	1/1:2,25:27:72.06:772,72,0	1/1:1,26:27:69.19:764,69,0	0/0:15,0:15:45.15:0,45,613	1/1:3,28:31:87.15:940,87,0	1/1:4,33:37:96.22:1049,96,0	1/1:0,9:9:27.07:299,27,0
chr10	90773583	.	TG	T	11629.34	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=20.709;DP=736;FS=7.191;HRun=1;HaplotypeScore=164.7974;InbreedingCoeff=0.9968;MQ=61.89;MQ0=1;MQRankSum=-0.681;QD=29.00;ReadPosRankSum=1.755;VQSLOD=4.1775;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,181,2857	1/1:10,0:10:17.88:209,18,0	0/0:32,0:28:84.27:0,84,1300	0/0:34,0:33:96.29:0,96,1465	1/1:25,0:25:62.31:671,62,0	1/1:17,0:16:48.13:535,48,0	1/1:19,0:19:49.13:538,49,0	1/1:23,0:23:62.41:688,62,0	1/1:20,0:20:52:553,52,0	0/0:31,0:31:90.28:0,90,1371	0/0:16,0:16:48.15:0,48,744	0/0:25,0:25:75.25:0,75,1186	0/0:25,0:25:75.26:0,75,1189	0/0:31,0:31:93.26:0,93,1410	1/1:43,1:43:99:1329,122,0	0/0:20,0:20:28.58:0,29,844	1/1:27,0:27:65.75:735,66,0	0/0:15,0:14:39.13:0,39,619	1/1:27,0:27:57.90:628,58,0	1/1:25,0:24:69.19:755,69,0	1/1:32,0:32:88.74:963,89,0	0/0:28,0:28:84.29:0,84,1336	1/1:26,1:27:76.06:844,76,0	1/1:30,0:30:73.15:798,73,0	0/0:17,0:17:51.17:0,51,796	1/1:31,1:32:92.71:1015,93,0	1/1:32,1:32:96.26:1078,96,0	1/1:10,0:10:15.66:290,16,0
chr10	90773694	.	G	GCA	3627.45	PASS	AB=0.940;AC=45;AF=0.865;AN=52;BaseQRankSum=0.610;DP=631;FS=5.969;HRun=0;HaplotypeScore=134.6877;InbreedingCoeff=-0.0182;MQ=62.36;MQ0=6;MQRankSum=-1.291;QD=6.66;ReadPosRankSum=-3.072;VQSLOD=2.5601;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,22:53:90.16:404,0,90	1/1:14,0:14:2.99:25,3,0	./.	./.	1/1:20,0:20:30.05:325,30,0	0/1:16,0:16:14.68:27,0,15	0/1:27,0:27:13.40:210,0,13	1/1:25,0:25:18.30:123,18,0	0/1:24,0:24:14.15:256,0,14	1/1:18,0:18:6.32:26,6,0	1/1:12,0:12:2.99:24,3,0	1/1:20,0:20:8.04:44,8,0	1/1:12,0:12:8.99:81,9,0	1/1:15,0:14:6.02:85,6,0	1/1:26,0:26:2.73:25,3,0	1/1:9,0:9:1.55:4,2,0	1/1:13,0:19:3:25,3,0	1/1:15,0:15:10.66:82,11,0	1/1:16,0:16:11.19:87,11,0	0/1:13,0:13:7.16:115,0,7	1/1:51,0:50:27.07:298,27,0	0/0:11,0:10:0.75:0,1,2	1/1:13,0:13:10.84:104,11,0	1/1:29,0:29:6.34:216,6,0	1/1:14,7:21:0.47:1,0,0	1/1:31,0:30:44.04:414,44,0	1/1:31,0:30:39.03:449,39,0	1/1:14,0:14:15.05:178,15,0
chr10	90773709	.	C	CACACACACAT	1268.72	PASS	AB=0.994;AC=20;AF=0.357;AN=56;BaseQRankSum=0.234;DP=610;FS=12.960;HRun=0;HaplotypeScore=168.5543;InbreedingCoeff=-0.1711;MQ=53.57;MQ0=9;MQRankSum=-1.213;QD=3.98;ReadPosRankSum=-0.860;VQSLOD=1.8743;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:54:87.79:0,88,1052	1/1:14,0:14:14.63:190,15,0	0/0:24,0:11:23.68:0,24,205	0/0:38,0:12:9:0,9,81	0/1:19,0:19:36.50:36,0,121	0/0:17,0:17:6:0,6,93	0/0:21,0:21:19.85:0,20,248	0/1:22,0:22:46.03:46,0,166	0/0:24,0:24:35.34:0,35,401	0/1:21,0:21:52.06:52,0,162	0/1:10,0:10:18.38:18,0,19	0/1:23,0:23:72.49:72,0,108	0/1:12,0:10:64.88:84,0,65	0/1:19,0:18:55.61:56,0,163	1/1:8,18:32:2.74:154,3,0	0/1:9,0:9:28.46:28,0,103	1/1:19,0:20:20.30:377,20,0	0/1:16,0:16:73.68:74,0,114	0/1:18,0:18:16.29:16,0,101	0/1:10,0:10:63.90:64,0,119	0/0:45,0:44:31.70:0,32,234	0/0:10,0:9:6.84:0,7,52	0/1:11,0:11:26.87:27,0,62	0/0:25,0:25:21.32:0,21,242	0/0:18,0:18:4.47:0,4,46	0/1:27,0:26:62.76:63,0,182	0/1:35,0:34:80.54:81,0,164	0/0:14,0:14:9.78:0,10,97
chr10	90773713	.	C	CAT	5855.93	PASS	AB=0.788;AC=25;AF=0.446;AN=56;BaseQRankSum=3.540;DP=614;FS=3.107;HRun=0;HaplotypeScore=90.5523;InbreedingCoeff=0.5418;MQ=54.83;MQ0=10;MQRankSum=-0.972;QD=14.79;ReadPosRankSum=8.560;VQSLOD=4.2665;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:55,0:54:99:113,0,523	0/0:14,0:14:18.29:0,18,133	0/0:26,0:11:29.81:0,30,247	0/0:35,0:11:20.47:0,20,216	1/1:12,7:19:29.78:570,30,0	0/1:1,15:17:5.26:52,0,5	1/1:4,18:22:14.86:397,15,0	1/1:6,17:24:7.42:470,7,0	1/1:4,20:25:32.73:519,33,0	0/0:23,0:23:54:0,54,421	0/0:10,0:9:5.99:0,6,50	0/0:22,0:22:24.35:0,24,181	0/0:12,0:10:5.67:0,6,85	0/1:18,0:17:3.72:4,0,183	0/1:31,0:31:2.33:2,0,41	0/0:10,0:10:26.92:0,27,212	0/0:20,0:20:10.19:0,10,169	0/0:17,0:17:21.08:0,21,211	1/1:19,1:20:13.68:347,14,0	0/1:9,1:10:3.26:253,0,3	0/1:6,38:44:3.82:484,0,4	0/0:10,0:9:11.85:0,12,101	1/1:8,3:11:20.85:258,21,0	0/1:5,19:26:11.20:374,0,11	0/0:18,0:18:10.55:0,11,95	1/1:18,9:26:77.36:1001,77,0	1/1:2,31:32:25.12:724,25,0	1/1:0,13:13:15.05:287,15,0
chr10	90773928	.	C	CT	4468.98	PASS	AB=0.764;AC=33;AF=0.589;AN=56;BaseQRankSum=3.838;DP=465;FS=0.842;HRun=12;HaplotypeScore=103.3261;InbreedingCoeff=0.7582;MQ=54.95;MQ0=1;MQRankSum=-8.976;QD=16.61;ReadPosRankSum=-3.760;VQSLOD=3.8167;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,1:35:36.41:0,36,430	1/1:4,8:12:2.11:182,2,0	1/1:6,0:5:2.13:7,2,0	0/1:4,0:2:0:0,0,0	1/1:9,20:29:68.61:623,69,0	1/1:5,7:14:27.60:234,28,0	1/1:2,4:7:17.86:159,18,0	1/1:12,7:21:2.98:280,3,0	1/1:5,11:15:33.05:320,33,0	0/0:6,0:20:32.74:0,33,107	0/0:5,0:19:29.67:0,30,94	0/0:3,0:19:26.46:0,26,76	0/0:2,0:11:13.76:0,14,40	0/0:1,0:18:30.55:0,31,88	1/1:7,8:14:27.03:255,27,0	0/0:0,0:12:20.37:0,20,59	1/1:5,8:13:18:175,18,0	0/0:3,0:22:34.62:0,35,100	1/1:8,4:15:19.74:182,20,0	0/1:11,11:21:1.40:317,0,1	1/1:7,4:10:15.02:146,15,0	0/0:4,0:9:13.72:0,14,56	1/1:5,10:15:35.89:327,36,0	0/1:2,3:5:9.89:75,0,10	0/0:3,0:30:46.83:0,47,135	1/1:6,14:19:48.05:455,48,0	1/1:11,11:21:4.25:344,4,0	1/1:8,12:20:44.76:388,45,0
chr10	90773944	.	GATTT	G	7097.32	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=11.439;DP=428;FS=12.601;HRun=0;HaplotypeScore=110.6242;InbreedingCoeff=0.9051;MQ=49.52;MQ0=2;MQRankSum=-11.513;QD=33.01;ReadPosRankSum=-1.654;VQSLOD=3.5693;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:63.07:0,63,1606	1/1:5,6:11:27.09:465,27,0	0/0:8,0:3:2.04:0,2,6	0/0:7,0:3:5.95:0,6,90	1/1:11,15:25:42.14:747,42,0	1/1:2,6:8:18.06:323,18,0	1/1:2,4:6:12.04:215,12,0	1/1:6,13:16:36.11:595,36,0	1/1:6,8:13:27.09:468,27,0	0/0:23,0:23:69.24:0,69,1705	0/0:15,0:14:36.11:0,36,873	0/0:15,0:15:36.12:0,36,900	0/0:10,0:10:20.75:0,21,455	0/0:20,0:20:45.15:0,45,1095	1/1:5,7:11:24.08:427,24,0	0/0:14,0:14:29.68:0,30,699	1/1:6,6:12:20.98:343,21,0	0/0:26,0:26:48.12:0,48,1151	1/1:5,5:10:15.05:269,15,0	1/1:7,10:16:30.10:538,30,0	1/1:5,3:7:12.04:199,12,0	0/0:10,0:10:6.01:0,6,103	1/1:5,10:15:21.07:377,21,0	1/1:5,3:7:2.56:102,3,0	0/0:27,0:27:63.20:0,63,1489	1/1:4,13:16:42.12:698,42,0	1/1:4,11:15:33.11:578,33,0	1/1:2,14:15:42.14:754,42,0
chr10	90773965	.	TA	T	5964.48	PASS	AB=0.556;AC=31;AF=0.574;AN=54;BaseQRankSum=7.534;DP=441;FS=13.869;HRun=1;HaplotypeScore=86.7866;InbreedingCoeff=0.8924;MQ=43.10;MQ0=19;MQRankSum=-10.710;QD=27.49;ReadPosRankSum=-2.183;VQSLOD=3.0839;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:51.17:0,51,814	1/1:0,10:10:24.08:334,24,0	./.	0/0:12,0:2:6.02:0,6,85	1/1:0,20:18:33.09:460,33,0	1/1:0,12:11:18.06:251,18,0	1/1:0,7:7:18.06:251,18,0	1/1:0,22:18:54.18:754,54,0	1/1:0,10:8:18.06:251,18,0	0/0:20,0:19:57.19:0,57,889	0/0:17,0:15:27.09:0,27,430	0/0:15,0:15:18.06:0,18,288	0/0:10,0:10:17.73:0,18,277	0/0:21,0:20:33.08:0,33,499	1/1:0,13:11:18.06:251,18,0	0/0:15,0:14:29.76:0,30,455	1/1:0,7:7:12.04:168,12,0	0/0:23,0:23:27.09:0,27,432	1/1:0,10:9:27.09:368,27,0	1/1:0,14:12:30.10:419,30,0	1/1:0,14:12:18.06:251,18,0	0/0:14,0:14:15.01:0,15,209	1/1:0,14:14:21.07:293,21,0	0/1:2,8:7:35.71:113,0,36	0/0:22,0:21:32.97:0,33,526	1/1:0,20:17:51.17:712,51,0	1/1:0,17:16:36.12:502,36,0	1/1:1,16:15:42.14:586,42,0
chr10	90774168	.	T	TTCTTC	22367.70	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-10.573;DP=680;FS=2.737;HRun=0;HaplotypeScore=123.5557;InbreedingCoeff=0.9993;MQ=74.66;MQ0=1;MQRankSum=-10.839;QD=62.48;ReadPosRankSum=-0.417;VQSLOD=5.2255;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,135,2814	1/1:1,9:10:24.08:744,24,0	0/0:35,0:31:53.67:0,54,1404	0/0:44,0:44:87.83:0,88,2104	1/1:4,13:19:42.14:1144,42,0	1/1:3,15:22:30.10:928,30,0	1/1:5,15:22:41.93:1248,42,0	1/1:6,8:18:45.09:1005,45,0	1/1:4,17:20:51.17:1523,51,0	0/0:18,0:18:51.17:0,51,1043	0/0:20,0:20:57.20:0,57,1192	0/0:24,0:24:56.98:0,57,1196	0/0:23,0:23:57.67:0,58,1183	0/0:27,0:27:65.99:0,66,1327	1/1:5,29:34:75.26:2090,75,0	0/0:23,0:23:66.21:0,66,1330	1/1:3,24:28:63.22:1945,63,0	0/0:22,0:25:64.17:0,64,1106	1/1:12,7:19:51.17:1314,51,0	1/1:2,10:13:30.10:870,30,0	1/1:6,31:37:78.27:2318,78,0	0/0:9,0:9:27.09:0,27,567	1/1:1,20:24:48.16:1370,48,0	1/1:3,24:27:60.21:1777,60,0	0/0:24,0:24:63.21:0,63,1286	1/1:2,20:22:60.18:1698,60,0	1/1:2,20:24:51.17:1558,51,0	1/1:2,10:13:27.09:837,27,0
chr10	90774497	.	T	TTTC	12071.43	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=10.377;DP=535;FS=3.206;HRun=0;HaplotypeScore=96.6857;InbreedingCoeff=0.9785;MQ=69.79;MQ0=0;MQRankSum=-9.444;QD=40.78;ReadPosRankSum=1.373;VQSLOD=6.1940;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.20:0,87,1274	1/1:0,9:9:27.09:561,27,0	0/0:24,0:16:38.50:0,39,385	0/0:25,0:17:8.58:0,9,220	1/1:2,7:10:8.66:180,9,0	1/1:3,12:16:30.10:651,30,0	1/1:4,11:15:24.08:501,24,0	1/1:4,22:26:66.04:1073,66,0	1/1:3,15:18:27.09:587,27,0	0/0:20,0:20:51.15:0,51,759	0/0:18,0:18:54.14:0,54,839	0/0:23,0:23:57.17:0,57,863	0/0:10,0:10:15.05:0,15,241	0/0:11,0:11:27.08:0,27,409	1/1:5,12:17:27.18:642,27,0	0/0:15,0:15:39.13:0,39,626	1/1:9,21:30:63.15:1269,63,0	0/0:26,0:26:72.25:0,72,1148	1/1:8,19:28:69.15:1163,69,0	1/1:4,11:15:36.12:763,36,0	1/1:5,9:14:36.12:762,36,0	0/0:19,0:19:51.17:0,51,799	1/1:2,18:20:48.16:1030,48,0	1/1:6,19:25:21.07:439,21,0	0/0:17,0:17:48.13:0,48,723	1/1:6,14:20:48.14:960,48,0	1/1:2,19:22:41.93:901,42,0	1/1:0,10:10:27.09:587,27,0
chr10	90774500	.	C	CTTCT	11736.47	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=6.610;DP=520;FS=4.924;HRun=0;HaplotypeScore=112.9026;InbreedingCoeff=0.9721;MQ=70.80;MQ0=0;MQRankSum=-10.037;QD=41.62;ReadPosRankSum=2.156;VQSLOD=4.7294;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.23:0,87,1569	1/1:9,0:9:27.09:473,27,0	0/0:25,0:17:37.48:0,37,530	0/0:26,0:18:17.43:0,17,284	1/1:9,0:9:2.90:173,3,0	1/1:14,2:16:30.10:594,30,0	1/1:12,2:14:20.60:552,21,0	1/1:24,1:25:65.87:1246,66,0	1/1:15,0:15:27.09:492,27,0	0/0:19,0:19:51.16:0,51,898	0/0:19,0:19:54.14:0,54,1007	0/0:22,0:22:60.17:0,60,1061	0/0:10,0:10:24.07:0,24,380	0/0:10,0:10:30.10:0,30,544	1/1:15,1:16:27.18:595,27,0	0/0:13,0:13:39.13:0,39,755	1/1:24,4:28:62.42:1218,62,0	0/0:27,0:27:75.25:0,75,1423	1/1:24,0:24:63.94:1231,64,0	1/1:14,2:16:30.52:752,31,0	1/1:11,2:13:34.12:756,34,0	0/0:19,0:19:51.17:0,51,957	1/1:19,2:21:36.60:927,37,0	1/1:24,2:25:25.44:516,25,0	0/0:17,0:17:48.13:0,48,889	1/1:18,2:20:33.30:858,33,0	1/1:20,0:20:42.01:842,42,0	1/1:10,0:10:27.09:513,27,0
chr10	90774667	.	G	GTT	4255.37	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=3.490;DP=451;FS=0.414;HRun=3;HaplotypeScore=113.5228;InbreedingCoeff=0.9901;MQ=61.34;MQ0=8;MQRankSum=-4.802;QD=18.83;ReadPosRankSum=-4.160;VQSLOD=0.9737;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:71.84:0,72,748	0/0:9,0:9:22.18:0,22,168	0/0:25,0:15:44.99:0,45,431	0/0:31,0:21:50.16:0,50,570	1/1:24,0:24:50.75:420,51,0	1/1:9,0:9:18.55:124,19,0	1/1:16,0:15:39.75:325,40,0	1/1:35,0:35:82.34:775,82,0	1/1:20,0:20:47.73:367,48,0	0/0:12,0:12:35.97:0,36,310	0/0:15,0:15:26.33:0,26,271	0/0:11,0:11:29.69:0,30,269	0/0:9,0:9:14.93:0,15,115	0/0:9,0:9:20.99:0,21,186	0/0:16,0:16:20.89:0,21,169	0/0:12,0:11:27:0,27,270	0/0:12,0:12:20.90:0,21,161	0/0:15,0:14:15.33:0,15,242	1/1:17,0:17:48.83:356,49,0	1/1:11,0:11:24.33:195,24,0	1/1:20,0:18:33.84:278,34,0	0/0:11,0:11:17.77:0,18,137	1/1:13,0:13:30.82:256,31,0	1/1:18,0:18:30.36:287,30,0	0/0:11,0:11:23.93:0,24,204	1/1:3,10:12:29.59:252,30,0	1/1:16,0:16:41.83:355,42,0	1/1:14,0:12:30:265,30,0
chr10	90774669	.	TTCTCTCTCTC	T	1553.76	PASS	AB=0.840;AC=12;AF=0.222;AN=54;BaseQRankSum=-0.269;DP=507;FS=32.529;HRun=0;HaplotypeScore=186.4428;InbreedingCoeff=0.4868;MQ=57.39;MQ0=12;MQRankSum=2.157;QD=15.38;ReadPosRankSum=2.396;VQSLOD=1.5012;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:54.15:0,54,1888	0/0:10,0:9:12.04:0,12,389	0/0:25,0:15:8.61:0,9,156	0/0:30,0:20:10.83:0,11,170	0/0:28,0:28:5.98:0,6,46	0/0:17,0:17:5.75:0,6,57	0/0:20,0:18:10.50:0,10,208	0/0:37,0:37:12.91:0,13,262	0/0:24,0:24:10.56:0,11,243	0/1:6,5:12:99:398,0,126	1/1:13,1:15:13.74:237,14,0	1/1:9,2:11:19.60:389,20,0	./.	0/1:7,0:9:2.46:46,0,2	0/0:20,0:20:22.72:0,23,902	1/1:11,0:11:10.94:316,11,0	0/0:14,0:13:13.84:0,14,259	1/1:11,2:13:12.04:270,12,0	0/0:21,0:21:12.04:0,12,252	0/1:13,0:13:0:0,0,0	0/0:20,0:18:3.01:0,3,71	0/0:5,5:11:2.68:0,3,11	0/0:17,0:17:4.57:0,5,100	0/0:19,0:19:12:0,12,290	0/1:12,0:14:48.93:53,0,49	0/0:17,0:15:27.29:0,27,706	0/0:19,0:17:24.04:0,24,542	0/0:15,0:13:3.01:0,3,73
chr10	90774710	.	TGTGTGTGTGTGTGTGTG	T	895.91	PASS	AB=0.805;AC=14;AF=0.259;AN=54;BaseQRankSum=2.063;DP=353;FS=0.861;HRun=0;HaplotypeScore=187.7138;InbreedingCoeff=0.2681;MQ=39.60;MQ0=16;MQRankSum=-5.729;QD=10.30;ReadPosRankSum=-2.790;VQSLOD=2.1639;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:69.55:0,70,4642	0/0:5,0:4:9:0,9,325	./.	0/0:5,0:2:6.02:0,6,450	0/0:6,1:7:4.37:0,4,12	1/1:8,2:10:2.53:111,3,0	0/1:4,4:8:10.64:109,0,11	0/0:13,0:12:36.07:0,36,502	0/1:7,3:9:44.88:45,0,68	0/0:23,0:22:60.97:0,61,3867	0/0:17,0:17:17.57:0,18,1516	0/0:19,0:18:26.52:0,27,1624	0/0:16,0:16:21.51:0,22,1491	0/0:15,0:15:17.42:0,17,1322	0/1:21,0:19:2.10:2,0,771	0/0:16,0:15:34.41:0,34,2126	0/0:13,0:12:23.39:0,23,1063	0/0:24,0:20:45.14:0,45,2213	0/1:10,0:6:42.38:147,0,42	1/1:4,3:7:8.99:246,9,0	1/1:6,0:4:4.88:15,5,0	0/0:18,0:18:9.37:0,9,698	0/1:3,3:6:10.03:10,0,20	0/0:7,1:8:3.37:0,3,9	0/0:20,0:19:29.86:0,30,2366	0/0:7,1:6:15:0,15,215	0/1:5,2:7:99:233,0,172	1/1:0,1:1:3.01:125,3,0
chr10	90774724	.	TGTG	T	144.17	PASS	AB=0.967;AC=15;AF=0.278;AN=54;BaseQRankSum=6.356;DP=355;FS=0.000;HRun=0;HaplotypeScore=121.0986;InbreedingCoeff=0.5118;MQ=41.91;MQ0=15;MQRankSum=-6.160;QD=2.77;ReadPosRankSum=-0.843;VQSLOD=1.7223;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:78:0,78,1349	0/0:5,0:4:9.03:0,9,139	0/0:18,0:10:30.10:0,30,376	0/0:14,0:8:24.08:0,24,323	0/0:6,1:7:2.21:0,2,5	1/1:8,1:10:2.53:27,3,0	0/1:7,0:7:4.10:26,0,4	0/0:3,0:1:3.01:0,3,37	0/1:8,0:8:7.70:8,0,8	0/0:26,0:25:68.91:0,69,1245	0/0:18,0:18:24.14:0,24,491	0/0:22,0:21:38.83:0,39,609	0/0:15,0:15:26.64:0,27,495	0/0:15,0:15:16.56:0,17,342	0/0:23,0:21:26.02:0,26,409	0/0:17,0:16:37:0,37,641	0/0:12,0:11:18.06:0,18,319	0/0:24,0:20:43.33:0,43,713	1/1:6,1:3:8.91:64,9,0	1/1:3,1:4:8.56:56,9,0	1/1:3,0:2:0.47:1,0,0	0/0:18,0:18:14.85:0,15,260	1/1:6,0:6:1.62:18,2,0	./.	0/0:19,0:18:30:0,30,638	0/0:4,0:3:5.95:0,6,57	0/1:5,0:4:15.45:63,0,15	1/1:1,0:1:3:29,3,0
chr10	90775080	.	A	AT	678.80	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.101;DP=251;FS=4.154;HRun=7;HaplotypeScore=28.6585;InbreedingCoeff=0.5277;MQ=59.82;MQ0=0;MQRankSum=0.827;QD=18.86;ReadPosRankSum=0.764;VQSLOD=2.5329;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:26.52:0,27,335	1/1:0,1:1:3.01:36,3,0	0/1:4,0:4:8.17:8,0,49	0/0:8,0:7:14.58:0,15,118	0/0:9,0:8:21.03:0,21,203	0/0:16,0:16:36.06:0,36,348	0/0:7,0:7:18.03:0,18,173	0/0:28,0:27:69.09:0,69,659	0/0:2,0:2:3:0,3,29	0/0:3,0:3:9.01:0,9,87	0/0:4,0:4:11.97:0,12,106	0/0:6,0:6:12.02:0,12,116	0/0:9,0:8:21.02:0,21,196	0/0:4,0:4:9.01:0,9,87	1/1:1,3:4:6.02:72,6,0	0/0:7,0:7:18.01:0,18,168	1/1:2,25:27:57.17:689,57,0	0/0:26,0:26:63.10:0,63,608	0/0:16,0:15:26.91:0,27,246	0/0:5,0:5:12.02:0,12,116	0/0:1,0:1:3:0,3,29	0/0:2,0:2:5.94:0,6,43	0/0:1,0:1:3:0,3,29	0/0:3,0:3:6:0,6,53	0/0:10,0:10:27.04:0,27,260	0/0:10,0:10:23.99:0,24,222	0/0:8,0:8:15.02:0,15,145	0/0:10,0:10:30.05:0,30,290
chr10	90775348	.	T	TA	6061.69	PASS	AB=0.877;AC=54;AF=0.964;AN=56;BaseQRankSum=-0.791;DP=449;FS=0.000;HRun=2;HaplotypeScore=145.7037;InbreedingCoeff=0.0303;MQ=67.10;MQ0=0;MQRankSum=-3.715;QD=13.50;ReadPosRankSum=3.452;VQSLOD=4.2530;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:36,1:37:94.35:639,94,0	1/1:6,1:7:5.89:38,6,0	0/1:10,3:13:90.24:90,0,100	0/1:15,1:16:9.53:10,0,149	1/1:22,2:24:35.18:198,35,0	1/1:20,1:21:42.18:261,42,0	1/1:9,2:11:19.54:186,20,0	1/1:11,5:16:38.45:305,38,0	1/1:11,2:13:36.40:253,36,0	1/1:17,0:17:49.70:423,50,0	1/1:15,1:16:36.53:230,37,0	1/1:12,2:14:40.40:312,40,0	1/1:13,2:14:38.61:250,39,0	1/1:19,0:19:47.51:242,48,0	1/1:25,0:25:50.17:279,50,0	1/1:10,0:9:22.85:121,23,0	1/1:18,3:21:57.39:449,57,0	1/1:11,0:11:28.11:193,28,0	1/1:18,0:17:12.35:258,12,0	1/1:28,1:29:36.69:171,37,0	1/1:10,0:10:11:47,11,0	1/1:12,1:13:34.34:196,34,0	1/1:8,0:8:5.32:21,5,0	1/1:13,1:14:20.69:138,21,0	1/1:14,0:14:30.78:159,31,0	1/1:10,2:12:32.14:253,32,0	1/1:18,1:19:37.51:245,38,0	1/1:6,0:6:14.15:95,14,0
chr10	90775644	.	G	GCTTTTGTCTCCCTCTCC	36821	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=3.896;DP=523;FS=16.766;HRun=0;HaplotypeScore=203.7329;InbreedingCoeff=0.9088;MQ=63.50;MQ0=0;MQRankSum=-16.072;QD=125.67;ReadPosRankSum=-2.984;VQSLOD=2.6693;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,4982	1/1:7,0:8:15.05:1034,15,0	0/0:7,0:7:18.01:0,18,680	0/0:8,0:8:24.03:0,24,882	1/1:11,4:21:42.14:1980,42,0	1/1:7,2:14:21.07:1464,21,0	1/1:17,7:29:69.24:4329,69,0	1/1:41,0:41:99:7969,114,0	1/1:7,5:14:30.10:2037,30,0	0/0:29,0:29:81.28:0,81,3763	0/0:20,0:20:60.18:0,60,2734	0/0:28,0:28:84.29:0,84,3634	0/0:14,0:14:39.11:0,39,1731	0/0:21,0:21:60.21:0,60,2753	1/1:6,6:14:33.11:2576,33,0	0/1:29,0:29:99:148,0,3889	1/1:9,3:14:30.10:2012,30,0	0/0:26,0:26:75.24:0,75,3555	1/1:6,0:6:15:618,15,0	1/1:6,8:17:27.06:1811,27,0	1/1:13,0:13:24.04:931,24,0	0/0:21,0:21:57.65:0,58,2581	1/1:9,4:15:15.05:1143,15,0	1/1:11,3:16:36.12:2386,36,0	0/0:17,0:17:45.15:0,45,2221	1/1:9,6:17:36.59:2315,37,0	1/1:13,8:22:56.31:3749,56,0	1/1:3,0:3:9.03:319,9,0
chr10	90775822	.	T	TG	2047.82	PASS	AB=0.652;AC=15;AF=0.268;AN=56;BaseQRankSum=9.728;DP=382;FS=40.438;HRun=3;HaplotypeScore=72.2164;InbreedingCoeff=0.0651;MQ=64.49;MQ0=2;MQRankSum=-7.209;QD=16.92;ReadPosRankSum=-2.362;VQSLOD=0.9139;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:34:87.27:0,87,1044	1/1:0,3:3:9.03:126,9,0	0/0:17,0:12:36.10:0,36,422	0/0:19,0:18:51.16:0,51,609	0/1:6,17:23:93.06:467,0,93	0/1:8,4:12:99:139,0,152	0/1:4,11:15:99:377,0,102	0/1:6,4:8:20.93:152,0,21	0/0:6,0:5:12.04:0,12,144	0/0:20,0:20:60.18:0,60,720	0/0:13,0:13:36.11:0,36,431	0/0:18,0:18:42.13:0,42,504	0/0:18,0:17:45.14:0,45,540	0/0:19,0:19:45.14:0,45,540	0/1:3,3:6:59.84:72,0,60	0/0:22,1:22:21.29:0,21,678	0/1:5,4:9:89.88:106,0,90	0/0:17,0:16:45.12:0,45,528	0/1:7,7:12:99:257,0,143	0/1:4,5:9:99:183,0,117	1/1:4,4:7:0.20:76,0,0	0/0:14,0:14:39.12:0,39,468	0/0:9,3:12:17.60:0,18,215	0/0:4,1:3:3.01:0,3,36	0/0:9,0:9:21.06:0,21,252	0/1:2,5:7:53.90:131,0,54	0/0:8,0:8:15.05:0,15,179	1/1:0,5:5:9.03:126,9,0
chr10	90775846	.	TTA	T	205.88	PASS	AB=0.755;AC=7;AF=0.130;AN=54;BaseQRankSum=5.137;DP=324;FS=17.078;HRun=0;HaplotypeScore=67.4268;InbreedingCoeff=0.3086;MQ=50.57;MQ0=9;MQRankSum=-4.471;QD=5.02;ReadPosRankSum=2.959;VQSLOD=0.7078;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:35:87.27:0,87,1684	1/1:1,1:2:3.01:37,3,0	0/0:13,0:8:18.06:0,18,297	0/0:11,0:10:27.08:0,27,464	0/0:5,9:14:14.48:0,14,256	0/0:5,2:7:9.03:0,9,155	0/1:5,8:12:33.10:33,0,198	./.	0/0:6,0:5:15.05:0,15,304	0/0:21,0:20:60.21:0,60,1186	0/0:12,0:11:30.10:0,30,609	0/0:17,0:17:46.04:0,46,878	0/0:14,0:14:36.12:0,36,731	0/0:15,0:15:36.12:0,36,723	0/0:3,2:5:9.03:0,9,182	0/0:22,1:22:63.22:0,63,1243	0/1:8,2:8:56.04:56,0,205	0/0:21,0:20:54.19:0,54,1093	0/1:10,3:11:88.59:89,0,452	0/0:3,2:5:9.03:0,9,158	0/0:6,1:4:5.98:0,6,92	0/0:13,0:13:36.11:0,36,682	0/0:8,2:9:21.54:0,22,372	0/0:6,0:3:8.92:0,9,131	0/0:7,0:7:21.07:0,21,427	1/1:0,3:3:9.03:117,9,0	0/0:6,0:6:12.04:0,12,209	0/0:2,0:1:2.88:0,3,15
chr10	90776189	.	CATCT	C	429.19	PASS	AC=12;AF=0.316;AN=38;BaseQRankSum=5.039;DP=255;FS=29.702;HRun=0;HaplotypeScore=64.7398;InbreedingCoeff=0.7484;MQ=67.96;MQ0=4;MQRankSum=-4.811;QD=42.92;ReadPosRankSum=0.746;VQSLOD=1.6755;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,163,4512	./.	0/0:26,0:19:57.16:0,57,1430	0/0:25,0:18:54.19:0,54,1403	./.	./.	1/1:0,1:1:3.01:63,3,0	./.	1/1:0,2:2:6.02:125,6,0	0/0:14,0:14:42.14:0,42,1217	0/0:17,0:17:51.17:0,51,1356	0/0:17,0:17:51.16:0,51,1396	0/0:14,0:14:42.14:0,42,1154	0/0:12,0:12:36.12:0,36,1038	1/1:0,2:2:6.02:125,6,0	0/0:18,0:18:54.19:0,54,1547	1/1:0,3:2:6.02:125,6,0	0/0:25,0:25:75.26:0,75,2136	./.	1/1:0,1:1:3.01:62,3,0	./.	0/0:8,0:8:24.05:0,24,609	1/1:0,1:1:3.01:63,3,0	./.	0/0:11,0:11:33.11:0,33,956	0/0:1,0:1:3.01:0,3,87	./.	./.
chr10	90776322	.	TA	T	4117.01	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=10.290;DP=289;FS=1.519;HRun=3;HaplotypeScore=33.2370;InbreedingCoeff=0.9270;MQ=62.46;MQ0=1;MQRankSum=-8.342;QD=32.42;ReadPosRankSum=1.108;VQSLOD=3.0409;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.30:0,90,1282	1/1:0,3:3:9.03:112,9,0	0/0:8,0:5:11.52:0,12,112	0/0:6,0:5:9.25:0,9,52	1/1:0,16:16:48.15:589,48,0	1/1:0,5:5:15.05:186,15,0	1/1:1,6:7:18.06:223,18,0	1/1:2,4:5:12.03:138,12,0	1/1:0,5:5:15.05:186,15,0	0/0:32,0:32:93.30:0,93,1310	0/0:13,0:13:36.12:0,36,517	0/0:8,0:8:24.06:0,24,326	0/0:10,0:10:30.10:0,30,429	0/0:7,0:7:21.06:0,21,284	1/1:0,6:6:18.06:223,18,0	0/0:13,0:13:39.13:0,39,554	1/1:2,5:5:9.03:111,9,0	0/0:21,0:21:60.20:0,60,864	1/1:0,11:10:30.09:372,30,0	1/1:0,14:14:39.12:483,39,0	1/1:0,4:4:12.04:149,12,0	0/0:3,0:3:9.03:0,9,130	1/1:1,5:6:12.04:149,12,0	1/1:0,2:2:6.02:74,6,0	0/0:10,0:10:30.10:0,30,432	1/1:0,7:7:18.02:194,18,0	1/1:0,12:12:30.09:371,30,0	1/1:0,16:16:45.14:558,45,0
chr10	90776481	.	AT	A	4782.86	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=10.341;DP=387;FS=5.257;HRun=9;HaplotypeScore=39.1007;InbreedingCoeff=0.9701;MQ=78.18;MQ0=0;MQRankSum=-4.565;QD=21.16;ReadPosRankSum=2.771;VQSLOD=5.2579;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.15:0,60,670	1/1:2,4:6:9:82,9,0	0/0:11,0:11:26.94:0,27,268	0/0:12,0:12:24.52:0,25,195	1/1:3,19:22:50.85:434,51,0	1/1:4,13:17:33.01:302,33,0	1/1:0,11:11:27.01:247,27,0	1/1:3,13:16:38.99:350,39,0	1/1:1,10:11:24.01:220,24,0	0/0:19,0:19:57.16:0,57,648	0/0:18,0:18:54.16:0,54,623	0/0:8,0:8:18.04:0,18,199	0/0:10,0:10:27.04:0,27,297	0/0:11,0:11:13.31:0,13,232	1/1:0,12:12:30.01:275,30,0	0/0:13,0:13:33.10:0,33,381	1/1:2,14:16:39.02:357,39,0	0/0:14,0:14:36.11:0,36,415	1/1:2,13:15:39.02:357,39,0	1/1:3,12:15:30.01:275,30,0	1/1:1,6:7:18.01:165,18,0	0/0:10,0:10:30.08:0,30,339	1/1:2,15:17:39.01:357,39,0	1/1:0,14:14:39.02:357,39,0	0/0:13,0:13:30.09:0,30,346	1/1:3,19:22:25.47:478,25,0	1/1:1,17:19:53.06:473,53,0	1/1:1,5:6:5.99:55,6,0
chr10	90776972	.	CT	C	8710.52	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-14.502;DP=682;FS=17.472;HRun=1;HaplotypeScore=143.2711;InbreedingCoeff=0.9986;MQ=62.97;MQ0=2;MQRankSum=1.047;QD=38.37;ReadPosRankSum=5.515;VQSLOD=2.6679;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:80.37:0,80,1353	0/0:6,0:6:18.06:0,18,268	0/0:32,0:28:78.26:0,78,1231	0/0:19,0:17:51.14:0,51,757	0/0:37,0:37:96.15:0,96,1346	0/0:21,0:21:54.10:0,54,762	0/0:23,0:23:63.16:0,63,859	0/0:30,0:30:90.28:0,90,1284	0/0:22,0:22:63.08:0,63,875	1/1:0,26:26:75.11:987,75,0	1/1:0,25:25:69.23:964,69,0	1/1:0,33:33:99:1384,99,0	1/1:0,27:27:69.16:938,69,0	1/1:0,24:24:63.21:880,63,0	0/0:31,0:31:93.16:0,93,1288	1/1:0,21:21:54.18:755,54,0	0/0:21,1:21:53.92:0,54,799	1/1:0,20:20:60.20:838,60,0	0/0:14,0:14:42.07:0,42,552	0/0:33,0:33:78.67:0,79,1063	0/0:14,0:14:33.08:0,33,450	1/1:0,36:36:99:1421,102,0	0/0:32,0:32:87.11:0,87,1105	0/0:18,0:18:54.15:0,54,760	1/1:0,15:15:39.13:545,39,0	0/0:25,0:25:33.48:0,33,957	0/0:31,0:31:90.14:0,90,1260	0/0:15,0:15:45.14:0,45,651
chr10	90777009	.	CTG	C	14662.65	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=3.992;DP=650;FS=8.567;HRun=0;HaplotypeScore=137.8336;InbreedingCoeff=0.9974;MQ=62.18;MQ0=1;MQRankSum=-3.628;QD=42.50;ReadPosRankSum=0.206;VQSLOD=5.6561;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.33:0,96,1854	1/1:0,8:8:24.08:358,24,0	0/0:22,0:22:45.34:0,45,908	0/0:16,0:15:42.06:0,42,679	1/1:2,32:34:93.32:1422,93,0	1/1:0,27:27:81.28:1239,81,0	1/1:0,13:13:39.12:575,39,0	1/1:1,25:26:75.24:1126,75,0	1/1:3,25:28:84.27:1261,84,0	0/0:35,0:35:99:0,102,1956	0/0:21,0:21:57.20:0,57,1092	0/0:31,0:31:93.32:0,93,1788	0/0:22,0:22:63.22:0,63,1206	0/0:27,0:27:69.23:0,69,1290	1/1:0,22:22:66.22:1010,66,0	0/0:23,0:23:63.22:0,63,1217	1/1:0,17:16:45.15:689,45,0	0/0:29,0:28:75.26:0,75,1448	1/1:0,16:14:42.14:643,42,0	1/1:4,28:32:90.30:1366,90,0	1/1:1,8:9:18.05:266,18,0	0/0:31,0:31:90.31:0,90,1737	1/1:2,26:28:78.26:1183,78,0	1/1:1,18:18:42.14:626,42,0	0/0:15,0:15:39.13:0,39,754	1/1:1,25:26:78.26:1193,78,0	1/1:2,32:34:96.32:1438,96,0	1/1:0,6:6:18.06:267,18,0
chr10	90777051	.	G	GT	10231.80	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-0.843;DP=709;FS=2.116;HRun=8;HaplotypeScore=109.9985;InbreedingCoeff=0.9992;MQ=63.77;MQ0=1;MQRankSum=-5.816;QD=26.71;ReadPosRankSum=-1.496;VQSLOD=3.7129;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,1009	1/1:2,10:12:33.09:372,33,0	0/0:22,0:22:57:0,57,512	0/0:23,0:23:51:0,51,462	1/1:2,26:29:80.93:861,81,0	1/1:3,23:26:66.15:747,66,0	1/1:2,22:24:63.15:712,63,0	1/1:13,19:32:69.18:777,69,0	1/1:4,24:29:75.22:864,75,0	0/0:39,0:39:99:0,108,984	0/0:24,0:24:60.03:0,60,549	0/0:30,0:30:84.04:0,84,769	0/0:25,0:25:40.69:0,41,551	0/0:22,0:22:51.02:0,51,463	1/1:6,21:28:56.99:629,57,0	0/0:27,0:27:72.03:0,72,655	1/1:3,15:18:36.11:414,36,0	0/0:29,0:28:68.95:0,69,621	1/1:5,13:18:39.12:450,39,0	1/1:3,30:33:87.26:1004,87,0	1/1:2,9:11:27.04:297,27,0	0/0:24,0:24:54:0,54,489	1/1:7,24:32:72.21:829,72,0	1/1:4,21:26:53.44:577,53,0	0/0:21,0:21:50.99:0,51,461	1/1:4,13:17:42.12:476,42,0	1/1:12,29:41:87.23:983,87,0	1/1:2,5:7:21.06:241,21,0
chr10	90778126	.	TGATATG	T	2340.71	PASS	AB=0.767;AC=12;AF=0.214;AN=56;BaseQRankSum=9.354;DP=427;FS=9.568;HRun=0;HaplotypeScore=118.0929;InbreedingCoeff=-0.2750;MQ=62.64;MQ0=0;MQRankSum=-8.821;QD=12.13;ReadPosRankSum=-1.776;VQSLOD=1.7512;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.22:0,84,2904	0/0:5,0:5:15.05:0,15,534	0/0:7,0:7:18.06:0,18,560	0/1:10,0:7:6.77:7,0,271	0/1:20,2:29:99:383,0,1719	0/1:10,4:15:99:132,0,1027	0/1:11,0:13:93.02:93,0,1132	0/1:10,3:16:99:283,0,888	0/1:4,2:7:99:170,0,370	0/0:16,0:16:48.16:0,48,1626	0/0:31,0:31:93.31:0,93,3109	0/0:22,0:22:66.23:0,66,2310	0/0:18,0:18:54.19:0,54,1812	0/0:7,0:7:21.07:0,21,739	0/0:12,0:12:36.12:0,36,1242	0/0:18,0:18:54.19:0,54,1924	0/0:16,0:16:48.16:0,48,1697	0/0:25,0:25:72.24:0,72,2416	0/1:6,6:14:99:383,0,582	0/1:14,3:21:99:318,0,1407	0/0:4,0:4:12.04:0,12,342	0/0:6,0:6:15.04:0,15,522	0/1:6,1:9:99:143,0,549	0/0:4,0:4:9.03:0,9,310	0/0:13,0:13:39.12:0,39,1291	0/1:15,0:18:36.71:37,0,1508	0/1:15,7:24:99:371,0,1241	0/1:9,5:14:99:172,0,895
chr10	90780117	.	AGATCGT	A	10080.91	PASS	AB=0.667;AC=31;AF=0.554;AN=56;BaseQRankSum=12.309;DP=534;FS=5.663;HRun=0;HaplotypeScore=153.6157;InbreedingCoeff=0.9052;MQ=74.08;MQ0=0;MQRankSum=-14.444;QD=41.15;ReadPosRankSum=1.198;VQSLOD=4.1650;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,108,3352	1/1:3,4:7:9.03:196,9,0	0/0:18,0:17:37.68:0,38,962	0/0:18,0:16:33.09:0,33,873	1/1:9,8:17:27.08:506,27,0	1/1:6,10:16:30.10:660,30,0	1/1:5,10:15:36.11:721,36,0	1/1:10,9:19:36.06:685,36,0	1/1:3,8:11:30.10:611,30,0	0/0:24,0:24:66.23:0,66,2100	0/0:17,0:17:42.13:0,42,1118	0/0:26,0:26:75.23:0,75,2201	0/0:20,0:20:60.19:0,60,1826	0/0:24,0:24:63.20:0,63,2000	1/1:8,16:24:63.15:1319,63,0	0/0:16,0:16:42.14:0,42,1318	1/1:9,17:26:63.21:1264,63,0	0/0:35,0:35:87.24:0,87,2620	1/1:5,7:12:24.08:516,24,0	1/1:8,5:13:18.06:391,18,0	1/1:6,4:10:9.03:181,9,0	0/0:28,0:28:78.27:0,78,2444	1/1:3,13:16:27.09:578,27,0	1/1:8,4:12:21.07:355,21,0	0/0:20,0:20:54.17:0,54,1578	0/1:13,13:26:35.61:1196,0,36	1/1:5,11:16:33.08:637,33,0	1/1:3,2:5:12.04:265,12,0
chr10	90780147	.	GGACCGA	G	10170.62	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=15.320;DP=530;FS=0.736;HRun=0;HaplotypeScore=170.7488;InbreedingCoeff=0.9547;MQ=74.97;MQ0=0;MQRankSum=-14.572;QD=40.04;ReadPosRankSum=-1.838;VQSLOD=4.5095;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,3445	1/1:1,6:7:12.04:214,12,0	0/0:15,0:14:33.04:0,33,776	0/0:16,0:16:39.08:0,39,667	1/1:6,10:16:8.90:207,9,0	1/1:3,13:16:45.15:903,45,0	1/1:4,20:24:54.03:887,54,0	1/1:5,12:17:39.12:696,39,0	1/1:5,7:12:33.06:558,33,0	0/0:23,0:23:60.20:0,60,1799	0/0:12,0:12:33.11:0,33,1091	0/0:27,0:27:80.92:0,81,2187	0/0:23,0:23:69.24:0,69,2184	0/0:29,0:29:81.28:0,81,2487	1/1:3,20:23:57.18:1157,57,0	0/0:16,0:16:45.15:0,45,1436	1/1:6,21:27:46.59:964,47,0	0/0:35,0:35:93.32:0,93,2854	1/1:1,23:24:69.17:1256,69,0	1/1:5,5:10:18.02:309,18,0	1/1:6,5:11:15.05:273,15,0	0/0:26,0:26:66.23:0,66,2057	1/1:2,13:15:27.07:505,27,0	1/1:4,5:9:2.28:68,2,0	0/0:16,0:16:39.13:0,39,1197	1/1:9,12:21:51.11:1016,51,0	1/1:1,16:17:39.13:869,39,0	1/1:1,4:5:15.04:291,15,0
chr10	90780217	.	C	CGAGATA	9472.88	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-5.508;DP=642;FS=5.040;HRun=0;HaplotypeScore=164.0936;InbreedingCoeff=0.9754;MQ=89.13;MQ0=2;MQRankSum=-11.328;QD=39.47;ReadPosRankSum=-3.942;VQSLOD=3.3958;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,150,3060	0/0:12,0:12:24.08:0,24,517	0/0:33,0:32:27.20:0,27,484	0/0:56,0:49:23.31:0,23,769	1/1:5,9:14:15.05:437,15,0	1/1:8,15:25:30.10:1002,30,0	1/1:22,4:26:30.07:669,30,0	1/1:15,18:37:66.20:1841,66,0	1/1:3,10:16:21.07:701,21,0	0/0:30,0:30:84.28:0,84,1719	0/0:13,0:13:30.10:0,30,633	0/0:24,0:24:57.18:0,57,1149	0/0:18,0:18:36.12:0,36,755	0/0:27,0:27:66.23:0,66,1386	0/0:20,0:20:45.14:0,45,894	0/0:15,0:15:36.08:0,36,693	0/0:26,0:26:66.23:0,66,1400	0/0:39,0:39:93.30:0,93,1941	1/1:21,2:23:33.07:609,33,0	1/1:1,9:13:21.07:701,21,0	1/1:8,4:15:12.04:401,12,0	0/0:19,0:19:45.15:0,45,969	1/1:4,8:13:12.04:401,12,0	1/1:3,7:12:9.03:300,9,0	0/0:9,0:9:15.04:0,15,273	1/1:5,12:18:39.13:1171,39,0	1/1:9,7:18:21.07:638,21,0	1/1:3,7:10:18.06:602,18,0
chr10	90780549	.	T	TAC	552.36	PASS	AB=0.963;AC=21;AF=0.477;AN=44;BaseQRankSum=-2.811;DP=231;FS=2.126;HRun=0;HaplotypeScore=49.3918;InbreedingCoeff=0.6524;MQ=74.02;MQ0=6;MQRankSum=2.384;QD=11.05;ReadPosRankSum=-3.102;VQSLOD=2.7324;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:98.90:0,99,1383	1/1:1,0:1:3.01:44,3,0	0/1:25,1:10:19.10:19,0,287	0/0:17,0:10:19.35:0,19,218	./.	./.	1/1:1,0:1:3.01:37,3,0	1/1:0,5:5:15.05:236,15,0	./.	0/0:15,0:15:35.68:0,36,485	0/0:9,0:9:20.99:0,21,254	0/0:16,0:16:42.14:0,42,567	0/0:9,0:9:17.68:0,18,218	0/0:12,0:12:24.05:0,24,313	1/1:1,0:1:2.99:24,3,0	0/0:16,0:16:42.12:0,42,545	1/1:4,0:2:2.99:24,3,0	0/0:21,0:21:44.35:0,44,531	1/1:3,0:3:9.01:115,9,0	./.	1/1:5,0:4:2.95:45,3,0	0/0:12,0:12:20.25:0,20,240	./.	./.	0/0:11,0:11:27.09:0,27,393	1/1:1,0:1:3.01:36,3,0	1/1:1,0:1:3.01:45,3,0	1/1:2,0:2:6.02:89,6,0
chr10	90780835	.	T	TTC	14686.57	PASS	AB=0.929;AC=33;AF=0.589;AN=56;BaseQRankSum=-10.828;DP=535;FS=7.663;HRun=0;HaplotypeScore=62.3434;InbreedingCoeff=0.9161;MQ=73.80;MQ0=1;MQRankSum=-3.479;QD=44.64;ReadPosRankSum=-0.829;VQSLOD=5.4814;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.30:0,90,1285	1/1:1,5:6:15.05:275,15,0	0/0:12,0:12:24.07:0,24,322	0/0:21,0:21:50.27:0,50,677	1/1:3,23:27:57.20:1041,57,0	1/1:0,19:18:48.16:878,48,0	1/1:1,24:26:69.24:1265,69,0	1/1:4,22:26:69.03:1124,69,0	1/1:0,22:22:57.20:1042,57,0	0/0:19,0:19:57.19:0,57,814	0/0:26,0:25:69.23:0,69,988	0/0:14,0:14:42.11:0,42,565	0/0:12,0:12:30.10:0,30,430	0/0:15,0:15:39.13:0,39,557	1/1:1,16:17:45.15:806,45,0	0/1:12,1:13:15.87:16,0,477	1/1:2,29:31:81.28:1480,81,0	0/0:23,0:23:66.22:0,66,945	1/1:4,17:20:51.15:901,51,0	1/1:1,13:14:39.13:714,39,0	1/1:0,19:20:54.19:989,54,0	0/0:14,0:14:33.11:0,33,466	1/1:0,15:17:45.07:824,45,0	1/1:0,15:15:42.12:769,42,0	0/0:18,0:18:54.16:0,54,755	1/1:1,17:19:11.19:880,11,0	1/1:3,27:30:81.28:1463,81,0	1/1:0,6:6:12.04:220,12,0
chr10	90781017	.	T	TG	5354.72	PASS	AB=0.734;AC=20;AF=0.357;AN=56;BaseQRankSum=7.666;DP=598;FS=35.009;HRun=1;HaplotypeScore=140.7263;InbreedingCoeff=-0.1031;MQ=57.64;MQ0=6;MQRankSum=-9.004;QD=15.80;ReadPosRankSum=1.222;VQSLOD=2.9433;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:71.59:0,72,841	0/1:4,1:5:21.67:32,0,22	0/0:21,0:13:14.48:0,14,198	0/1:18,0:9:2.47:2,0,87	0/1:17,10:28:89.20:474,0,89	0/1:14,5:19:41.41:298,0,41	0/1:5,6:11:8.06:224,0,8	0/1:33,12:39:99:572,0,158	1/1:7,8:15:2.40:352,2,0	0/0:31,0:31:77.65:0,78,970	0/0:21,0:21:56.88:0,57,618	0/0:21,0:21:41.59:0,42,478	0/0:15,0:15:27.09:0,27,348	0/0:13,0:15:35.95:0,36,406	1/1:9,15:24:21.53:606,22,0	0/0:23,0:23:48.10:0,48,600	0/1:11,3:14:37.56:135,0,38	0/0:28,0:27:68.65:0,69,762	0/1:15,11:24:3.96:520,0,4	0/1:16,11:26:42.21:410,0,42	0/1:1,4:5:9.89:77,0,10	0/0:26,0:26:74.92:0,75,866	0/1:13,4:15:48.64:190,0,49	1/1:4,1:4:0.54:52,1,0	0/0:27,0:27:66.13:0,66,773	0/1:15,21:36:99:632,0,140	0/1:18,12:29:99:550,0,109	0/1:3,10:13:17.67:228,0,18
chr10	90781018	.	G	GGGT	1802.08	PASS	AB=0.977;AC=17;AF=0.304;AN=56;BaseQRankSum=11.832;DP=597;FS=12.355;HRun=0;HaplotypeScore=178.2027;InbreedingCoeff=-0.2293;MQ=55.64;MQ0=7;MQRankSum=-10.268;QD=5.63;ReadPosRankSum=2.143;VQSLOD=2.2906;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:30:55.62:0,56,1192	0/1:4,0:5:3.59:5,0,4	0/0:24,0:12:29.74:0,30,375	0/0:17,0:8:12.92:0,13,188	0/1:28,0:28:99:213,0,222	0/1:19,0:19:99:114,0,124	0/1:12,0:12:21.79:87,0,22	0/1:41,4:40:99:382,0,425	0/1:15,0:15:31.55:109,0,32	0/0:30,0:30:87.28:0,87,1515	0/0:20,0:20:57.19:0,57,1005	0/0:22,0:22:42.14:0,42,739	0/0:15,0:15:27.09:0,27,485	0/0:16,0:16:36.12:0,36,654	1/1:24,0:24:0.53:146,1,0	0/0:23,0:23:48.16:0,48,893	0/1:12,1:13:28.46:185,0,28	0/0:27,0:26:72.17:0,72,1208	0/1:25,2:25:99:144,0,157	0/1:26,0:25:99:116,0,143	0/1:5,0:5:14.27:14,0,26	0/0:26,0:26:69.81:0,70,1291	0/1:16,0:14:98:98,0,98	0/1:5,0:4:0.79:15,0,1	0/0:27,0:27:66.23:0,66,1197	0/1:34,1:35:99:191,0,361	0/1:28,0:29:99:101,0,305	0/1:13,0:13:37.39:37,0,51
chr10	90781020	.	T	TTTG	492.34	PASS	AB=0.740;AC=3;AF=0.054;AN=56;BaseQRankSum=7.363;DP=610;FS=20.656;HRun=0;HaplotypeScore=192.1641;InbreedingCoeff=0.1117;MQ=54.21;MQ0=9;MQRankSum=-7.661;QD=12.01;ReadPosRankSum=2.020;VQSLOD=1.9011;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:72.34:0,72,1130	0/1:2,3:5:3.31:148,0,3	0/0:23,0:11:26.78:0,27,290	0/0:17,0:8:14.04:0,14,205	0/0:29,0:29:39.69:0,40,308	0/0:20,0:20:18.31:0,18,191	0/0:12,0:12:26.38:0,26,128	0/0:47,0:40:48.08:0,48,586	0/0:15,0:15:9.44:0,9,121	0/0:29,0:30:70.40:0,70,1184	0/0:23,0:22:54.15:0,54,836	0/0:22,0:22:45.13:0,45,702	0/0:15,0:15:27.09:0,27,450	0/0:17,0:17:39.10:0,39,617	0/1:21,3:24:99:192,0,155	0/0:24,0:24:54.13:0,54,853	0/1:7,4:12:50.61:252,0,51	0/0:29,0:28:72.52:0,73,1045	0/0:26,0:24:35.44:0,35,322	0/0:29,0:28:21.62:0,22,204	0/0:4,0:4:4.32:0,4,33	0/0:27,0:27:69.20:0,69,1140	0/0:17,0:15:11.62:0,12,103	0/0:6,0:5:0.90:0,1,7	0/0:26,0:26:63.16:0,63,1004	0/0:35,0:35:48.46:0,48,470	0/0:30,0:29:65.75:0,66,420	0/0:13,0:13:11.76:0,12,88
chr10	90781024	.	T	TGG	4400.16	PASS	AB=0.984;AC=17;AF=0.304;AN=56;BaseQRankSum=9.979;DP=607;FS=43.387;HRun=1;HaplotypeScore=162.9065;InbreedingCoeff=-0.2576;MQ=52.61;MQ0=10;MQRankSum=-12.307;QD=13.67;ReadPosRankSum=2.915;VQSLOD=-0.3471;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:86.94:0,87,1197	0/1:5,0:5:7.22:7,0,18	0/0:29,0:13:26.12:0,26,253	0/0:19,0:9:16.93:0,17,170	0/1:28,0:28:99:333,0,309	0/1:18,1:19:99:200,0,194	0/1:12,0:12:55.41:191,0,55	0/1:47,1:42:99:895,0,113	0/1:13,0:13:60.62:228,0,61	0/0:27,0:27:72.01:0,72,1052	0/0:21,0:20:51.17:0,51,761	0/0:20,0:21:42.14:0,42,638	0/0:15,0:15:24.08:0,24,365	0/0:18,0:18:48.14:0,48,681	1/1:22,1:23:13.51:400,14,0	0/0:26,0:26:57.14:0,57,805	0/1:12,1:13:18.17:191,0,18	0/0:28,0:27:72.19:0,72,1019	0/1:24,1:23:99:450,0,132	0/1:27,1:27:99:245,0,169	0/1:5,0:5:34.61:38,0,35	0/0:25,0:25:74.78:0,75,1064	0/1:17,0:15:98.38:197,0,98	0/1:7,0:6:13.47:48,0,13	0/0:25,0:25:60.20:0,60,915	0/1:33,1:34:99:469,0,309	0/1:31,0:30:99:366,0,316	0/1:13,0:13:56.49:141,0,56
chr10	90781025	.	G	GGGTT	7475.32	PASS	AB=0.816;AC=18;AF=0.321;AN=56;BaseQRankSum=7.561;DP=601;FS=48.605;HRun=0;HaplotypeScore=171.1585;InbreedingCoeff=-0.0870;MQ=53.68;MQ0=10;MQRankSum=-11.558;QD=23.88;ReadPosRankSum=3.154;VQSLOD=2.8779;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:86:0,86,1564	0/1:1,0:5:1.58:46,0,2	0/0:31,0:14:29.99:0,30,353	0/0:19,0:9:16.98:0,17,203	0/1:24,2:29:99:734,0,231	0/1:16,2:19:99:279,0,107	0/1:8,1:11:48.81:307,0,49	0/1:24,5:40:99:952,0,107	0/1:6,5:11:36.69:437,0,37	0/0:27,0:27:72.69:0,73,1354	0/0:21,0:20:54.17:0,54,1021	0/0:21,0:21:42.14:0,42,822	0/0:14,0:14:24.08:0,24,466	0/0:18,0:18:48.16:0,48,858	1/1:9,5:21:41.77:859,42,0	0/0:26,0:26:57.13:0,57,1031	0/1:3,2:13:2.21:290,0,2	0/0:28,0:27:71.49:0,71,1313	0/1:16,3:21:94.86:548,0,95	0/1:21,5:27:99:546,0,130	0/1:4,1:5:20.02:122,0,20	0/0:25,0:25:74.92:0,75,1352	0/1:13,2:17:73.24:404,0,73	1/1:7,0:7:4.68:16,5,0	0/0:25,0:25:60.21:0,60,1197	0/1:24,4:31:99:803,0,309	0/1:24,3:29:99:764,0,242	0/1:10,3:13:40.18:366,0,40
chr10	90781034	.	T	TTG	3198.60	PASS	AB=0.830;AC=20;AF=0.357;AN=56;BaseQRankSum=9.305;DP=621;FS=54.627;HRun=0;HaplotypeScore=159.5420;InbreedingCoeff=0.1352;MQ=57.34;MQ0=15;MQRankSum=-7.917;QD=9.87;ReadPosRankSum=3.379;VQSLOD=0.9967;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:64.72:0,65,833	1/1:5,0:5:11.63:129,12,0	0/0:42,0:14:29.18:0,29,283	0/0:27,0:13:10.57:0,11,96	0/1:27,5:33:77.22:316,0,77	0/1:5,11:17:55.85:152,0,56	0/1:10,1:11:9.73:112,0,10	0/1:35,11:39:99:413,0,163	0/1:11,0:11:36.89:37,0,39	0/0:28,0:28:34.12:0,34,436	0/0:21,0:20:53.67:0,54,403	0/0:20,0:20:35:0,35,335	0/0:13,0:13:20.91:0,21,188	0/0:18,0:18:20.73:0,21,247	1/1:21,0:21:33.35:354,33,0	0/0:24,0:24:31.20:0,31,395	0/1:12,0:12:4.82:208,0,5	0/0:27,0:26:27.52:0,28,458	0/1:18,5:21:83.73:258,0,84	0/1:21,7:29:0.26:327,0,0	1/1:4,2:6:11.54:123,12,0	0/0:24,0:24:44.29:0,44,448	0/1:15,6:21:33.61:131,0,34	0/1:7,2:8:10.47:81,0,10	0/0:21,0:21:47.63:0,48,411	0/1:26,4:31:99:261,0,137	0/1:19,8:26:99:343,0,112	1/1:19,1:20:23.47:136,23,0
chr10	90781035	.	T	TG	1046.10	PASS	AB=0.963;AC=18;AF=0.321;AN=56;BaseQRankSum=11.191;DP=617;FS=62.241;HRun=0;HaplotypeScore=152.7636;InbreedingCoeff=-0.1331;MQ=57.44;MQ0=15;MQRankSum=-8.122;QD=3.25;ReadPosRankSum=4.353;VQSLOD=0.8209;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:80.60:0,81,771	1/1:1,4:5:11.01:59,11,0	0/0:40,0:12:28.37:0,28,259	0/0:27,0:13:10.55:0,11,105	0/1:32,1:33:92.52:93,0,170	0/1:17,0:17:33.58:34,0,73	0/1:11,0:11:33.70:34,0,43	0/1:46,0:39:99:102,0,218	0/1:10,1:11:38.30:51,0,38	0/0:29,0:29:59.76:0,60,437	0/0:21,0:20:34.84:0,35,279	0/0:20,0:20:33.05:0,33,290	0/0:13,0:13:20.95:0,21,187	0/0:18,0:18:39.78:0,40,267	1/1:13,7:20:26.55:184,27,0	0/0:24,0:24:33.75:0,34,329	0/1:7,5:12:15.57:89,0,16	0/0:27,0:26:38.31:0,38,441	0/1:22,0:20:33.91:34,0,143	0/1:28,2:29:37.89:147,0,38	0/1:6,0:6:7.79:29,0,8	0/0:24,0:24:60.51:0,61,471	0/1:23,0:22:46.10:64,0,46	0/1:9,0:8:12.13:25,0,12	0/0:21,0:21:42.17:0,42,357	0/1:29,0:29:94.15:94,0,167	0/1:28,0:27:94.04:114,0,94	0/1:19,1:20:62.19:65,0,62
chr10	90781039	.	T	TG	255.66	PASS	AB=0.864;AC=6;AF=0.107;AN=56;BaseQRankSum=5.088;DP=604;FS=7.469;HRun=0;HaplotypeScore=147.3844;InbreedingCoeff=0.1086;MQ=57.65;MQ0=15;MQRankSum=-5.954;QD=3.41;ReadPosRankSum=-1.508;VQSLOD=2.5531;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.54:0,79,758	1/1:2,4:6:0.39:70,0,0	0/0:40,0:13:31.25:0,31,274	0/1:24,0:11:2.39:2,0,57	0/0:33,0:33:58.38:0,58,447	0/0:18,0:18:23.06:0,23,158	0/0:11,0:11:30.63:0,31,160	0/0:45,0:38:71.67:0,72,527	0/1:12,0:12:4.81:5,0,90	0/0:29,0:29:66.78:0,67,476	0/0:21,0:20:34.77:0,35,263	0/0:19,0:19:26.92:0,27,234	0/0:11,0:11:14.99:0,15,143	0/0:18,0:18:38.90:0,39,260	0/1:14,7:21:51.09:170,0,51	0/0:23,0:23:33.17:0,33,331	0/1:7,5:12:17.89:114,0,18	0/0:26,0:25:52.48:0,52,461	0/0:22,0:21:42.24:0,42,326	0/0:31,0:30:33.62:0,34,282	0/0:6,0:6:1.90:0,2,75	0/0:25,0:25:62.74:0,63,480	0/0:22,0:21:16.84:0,17,194	0/0:9,0:8:8.91:0,9,70	0/0:19,0:19:33.17:0,33,277	0/0:27,0:27:57.42:0,57,375	0/0:28,0:27:71.54:0,72,425	0/0:17,0:17:33.57:0,34,207
chr10	90781153	.	CTG	C	6974.33	PASS	AB=0.560;AC=31;AF=0.554;AN=56;BaseQRankSum=14.183;DP=501;FS=19.878;HRun=0;HaplotypeScore=91.9066;InbreedingCoeff=0.9094;MQ=85.17;MQ0=2;MQRankSum=-11.830;QD=34.87;ReadPosRankSum=-2.542;VQSLOD=4.4951;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,144,2732	1/1:0,4:4:9.03:137,9,0	0/0:21,0:21:60.16:0,60,1046	0/0:19,0:19:51.16:0,51,945	1/1:1,14:15:36.11:527,36,0	1/1:1,13:14:24.08:367,24,0	1/1:3,15:18:45.13:661,45,0	1/1:3,14:17:45.15:688,45,0	1/1:3,8:11:30.10:458,30,0	0/0:20,0:20:60.20:0,60,1119	0/0:33,0:33:99:0,99,1861	0/0:23,0:23:66.23:0,66,1264	0/0:13,0:13:36.11:0,36,662	0/0:20,0:20:57.20:0,57,1100	1/1:3,14:16:45.13:664,45,0	0/0:28,0:28:81.25:0,81,1488	1/1:0,7:6:12.04:184,12,0	0/0:23,0:22:60.12:0,60,1082	1/1:2,10:12:30.10:459,30,0	1/1:4,13:16:48.13:679,48,0	1/1:3,14:17:33.11:504,33,0	0/0:25,0:25:75.17:0,75,1394	1/1:0,11:11:30.10:458,30,0	1/1:3,8:11:17.98:274,18,0	0/0:25,0:25:75.24:0,75,1414	0/1:3,11:14:24.85:425,0,25	1/1:1,10:11:21.07:307,21,0	1/1:0,4:4:12.04:183,12,0
chr10	90781169	.	A	AG	7082.64	PASS	AB=0.556;AC=31;AF=0.554;AN=56;BaseQRankSum=17.524;DP=538;FS=26.368;HRun=4;HaplotypeScore=106.9703;InbreedingCoeff=0.9165;MQ=79.32;MQ0=0;MQRankSum=-12.427;QD=29.39;ReadPosRankSum=-6.255;VQSLOD=1.4184;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,126,1429	1/1:0,4:4:9.02:122,9,0	0/0:16,0:16:39.11:0,39,442	0/0:17,0:17:41.76:0,42,440	1/1:4,17:21:51.17:679,51,0	1/1:2,12:14:24.08:327,24,0	1/1:4,18:22:51.13:672,51,0	1/1:4,15:19:45.15:609,45,0	1/1:2,9:11:24.08:325,24,0	0/0:19,0:19:57.16:0,57,647	0/0:33,0:33:93.26:0,93,1055	0/0:21,0:21:60.17:0,60,680	0/0:13,0:13:39.11:0,39,441	0/0:23,0:23:69.18:0,69,771	1/1:6,15:21:39.10:495,39,0	0/0:29,0:29:87.22:0,87,967	1/1:3,13:16:36.12:479,36,0	0/0:25,0:24:69.20:0,69,782	1/1:2,13:15:33.04:448,33,0	1/1:2,16:18:45.15:613,45,0	1/1:5,16:21:42.14:572,42,0	0/0:25,0:25:69.20:0,69,783	1/1:2,9:10:24.08:325,24,0	1/1:3,12:15:33.11:450,33,0	0/0:26,0:26:78.22:0,78,885	0/1:3,12:15:25.96:434,0,26	1/1:1,12:13:24.08:328,24,0	1/1:1,4:5:15.05:204,15,0
chr10	90782873	.	G	GT	4151.82	PASS	AB=0.867;AC=34;AF=0.630;AN=54;BaseQRankSum=3.690;DP=513;FS=16.209;HRun=13;HaplotypeScore=78.6257;InbreedingCoeff=0.5528;MQ=72.24;MQ0=5;MQRankSum=-0.346;QD=11.56;ReadPosRankSum=-0.583;VQSLOD=1.4762;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:33:12.43:0,12,404	1/1:3,4:7:12.01:111,12,0	0/1:26,0:16:0.81:1,0,35	0/1:21,0:15:24.78:25,0,34	1/1:3,17:21:47.73:412,48,0	1/1:4,12:17:29.82:255,30,0	1/1:8,6:14:9.01:84,9,0	1/1:10,16:25:52.25:428,52,0	1/1:3,12:17:29.71:252,30,0	0/0:32,0:32:32.39:0,32,224	0/1:10,1:11:11.38:11,0,70	0/0:17,0:17:41.57:0,42,287	0/1:13,0:13:12.92:13,0,67	0/0:13,1:15:21.01:0,21,132	1/1:4,14:18:30.03:279,30,0	0/0:20,0:20:44.57:0,45,307	1/1:7,26:32:19.38:461,19,0	0/0:18,0:19:43.58:0,44,291	1/1:6,8:15:22.07:177,22,0	1/1:2,15:18:41.89:377,42,0	1/1:4,8:12:21.02:195,21,0	./.	1/1:4,14:17:26.83:236,27,0	1/1:3,6:11:17.49:177,17,0	0/0:17,0:17:44.61:0,45,308	0/1:11,13:22:51.97:252,0,52	0/1:9,13:22:63.87:184,0,64	1/1:1,9:9:24.03:223,24,0
chr10	90783185	.	ATT	A	2542.90	PASS	AB=0.657;AC=29;AF=0.518;AN=56;BaseQRankSum=0.421;DP=470;FS=0.000;HRun=14;HaplotypeScore=75.2526;InbreedingCoeff=0.6065;MQ=70.51;MQ0=21;MQRankSum=-1.185;QD=11.10;ReadPosRankSum=3.693;VQSLOD=2.4915;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:37:83.15:0,83,1019	1/1:0,6:6:15:139,15,0	0/0:61,0:17:27.79:0,28,289	0/0:56,0:17:25.63:0,26,200	1/1:10,11:19:26.80:250,27,0	0/1:8,14:22:7.85:291,0,8	1/1:1,11:13:35.78:317,36,0	1/1:8,6:14:8.79:82,9,0	1/1:1,3:5:8.73:67,9,0	0/0:7,0:8:9:0,9,81	0/0:2,0:10:27.88:0,28,267	0/0:4,0:12:15.01:0,15,139	0/0:1,0:6:9.01:0,9,86	0/0:3,0:8:11.99:0,12,119	1/1:2,2:4:5.95:55,6,0	0/1:3,1:10:15.74:16,0,87	1/1:9,17:26:10.83:305,11,0	0/0:5,0:17:27.05:0,27,285	1/1:8,7:16:20.58:179,21,0	0/1:5,6:13:2.66:98,0,3	1/1:6,12:20:9.94:268,10,0	0/0:1,0:5:12.03:0,12,126	1/1:2,4:6:11.72:95,12,0	0/1:3,6:12:35.87:84,0,36	0/0:6,0:16:27.06:0,27,307	1/1:1,10:11:30.01:273,30,0	0/1:5,13:19:8.01:118,0,8	1/1:2,6:8:11.95:111,12,0
chr10	90783623	.	T	TTG	15037.19	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-10.618;DP=702;FS=0.295;HRun=0;HaplotypeScore=120.9076;InbreedingCoeff=0.7783;MQ=66.65;MQ0=11;MQRankSum=-4.838;QD=31.59;ReadPosRankSum=0.360;VQSLOD=6.5193;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,113,1398	1/1:0,14:13:33.11:570,33,0	0/0:24,0:23:59.74:0,60,670	0/0:27,0:25:56.02:0,56,595	1/1:23,0:23:50.24:849,50,0	1/1:29,0:29:69.64:974,70,0	1/1:24,0:22:63.10:918,63,0	1/1:33,0:30:78.10:1056,78,0	1/1:29,0:29:81.20:1203,81,0	0/1:22,0:22:2.22:2,0,121	0/1:21,0:21:6.68:7,0,189	0/1:25,0:25:26.53:27,0,185	0/0:33,0:33:18.22:0,18,320	0/0:17,0:17:21.25:0,21,162	1/1:1,20:21:33.11:571,33,0	0/0:19,0:19:2.07:0,2,149	1/1:2,23:24:48.16:830,48,0	0/0:14,0:14:11.91:0,12,127	1/1:18,0:16:41.97:570,42,0	1/1:35,0:34:93.24:1364,93,0	1/1:38,0:37:93.14:1390,93,0	0/0:21,0:21:27.33:0,27,245	1/1:18,0:18:54.06:744,54,0	1/1:29,0:27:69.09:1009,69,0	0/0:33,0:33:63.93:0,64,338	1/1:26,0:26:75.22:1087,75,0	1/1:31,0:30:81.25:1254,81,0	1/1:14,0:13:39.13:614,39,0
chr10	90783624	.	T	TG	8266.76	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=10.419;DP=688;FS=1.306;HRun=0;HaplotypeScore=130.8765;InbreedingCoeff=0.6553;MQ=66.63;MQ0=11;MQRankSum=-2.838;QD=17.12;ReadPosRankSum=0.567;VQSLOD=6.8707;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1325	1/1:14,0:13:32.03:186,32,0	0/0:27,0:26:63.24:0,63,652	0/0:25,0:23:56.39:0,56,547	1/1:6,16:21:49.46:503,49,0	1/1:10,18:28:68.93:608,69,0	1/1:5,19:22:62.41:560,62,0	1/1:12,17:26:76.19:578,76,0	1/1:10,19:29:64.68:700,65,0	0/1:21,0:21:25.49:25,0,31	0/1:21,0:21:17.69:18,0,95	0/1:25,0:25:39.92:40,0,73	0/0:33,0:33:2.08:0,2,166	0/0:17,0:17:11.45:0,11,72	1/1:20,0:20:31.93:172,32,0	0/1:19,0:19:6.25:6,0,72	1/1:23,0:22:46.39:250,46,0	0/0:14,0:14:7.80:0,8,66	1/1:6,11:15:40.64:349,41,0	1/1:7,28:34:75.84:733,76,0	1/1:3,36:38:80.38:848,80,0	0/0:18,0:18:19.38:0,19,144	1/1:4,14:18:48.04:396,48,0	1/1:9,20:27:68.90:607,69,0	0/0:33,0:33:41.78:0,42,153	1/1:6,19:25:73.27:626,73,0	1/1:8,23:30:79.97:702,80,0	1/1:1,13:13:39.02:359,39,0
chr10	90783627	.	T	TG	6453.25	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=10.849;DP=675;FS=6.619;HRun=0;HaplotypeScore=134.1063;InbreedingCoeff=0.9997;MQ=68.39;MQ0=11;MQRankSum=-3.092;QD=19.73;ReadPosRankSum=1.942;VQSLOD=6.1855;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1325	0/0:12,0:11:32.63:0,33,225	0/0:29,0:28:68.83:0,69,742	0/0:23,0:21:50.05:0,50,499	1/1:4,17:20:26.20:379,26,0	1/1:9,18:27:43.76:448,44,0	1/1:3,19:20:46.59:436,47,0	1/1:9,17:23:50.40:469,50,0	1/1:9,19:28:64.38:637,64,0	0/0:21,0:21:63.18:0,63,810	0/0:20,0:20:60.15:0,60,789	0/0:26,0:26:72.18:0,72,920	0/0:32,0:32:96.27:0,96,1247	0/0:17,0:17:51.16:0,51,677	0/0:22,0:22:38.79:0,39,290	0/0:18,0:18:54.08:0,54,677	0/0:24,0:23:47.38:0,47,322	0/0:14,0:14:42.02:0,42,526	1/1:5,11:14:32.43:310,32,0	1/1:6,28:34:88.64:676,89,0	1/1:7,30:36:73.41:744,73,0	0/0:19,0:19:57.18:0,57,766	1/1:3,14:17:37.68:316,38,0	1/1:9,20:27:48.31:513,48,0	0/0:33,0:33:96.28:0,96,1279	1/1:6,19:25:70.23:572,70,0	1/1:6,23:29:77.78:634,78,0	1/1:1,13:13:38.35:318,38,0
chr10	90784204	.	T	TAG	5492.64	PASS	AB=0.893;AC=34;AF=0.607;AN=56;BaseQRankSum=-2.856;DP=543;FS=9.091;HRun=0;HaplotypeScore=138.5165;InbreedingCoeff=0.7087;MQ=62.00;MQ0=12;MQRankSum=-0.545;QD=14.45;ReadPosRankSum=0.132;VQSLOD=4.4899;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:26:65.94:0,66,629	1/1:12,1:12:17.72:279,18,0	0/0:18,0:11:32.97:0,33,319	0/1:19,0:14:4.14:4,0,121	1/1:14,0:15:26.99:295,27,0	1/1:29,0:29:45.09:440,45,0	1/1:20,0:18:44.78:389,45,0	1/1:27,0:27:60.11:543,60,0	1/1:19,1:20:36.04:485,36,0	0/1:28,0:28:10.17:10,0,338	0/0:13,0:13:16.76:0,17,131	0/1:16,0:16:15.08:15,0,132	0/0:19,0:19:30.07:0,30,195	0/0:16,0:16:18.84:0,19,246	1/1:12,1:13:19.46:215,19,0	0/0:23,0:23:14.01:0,14,199	0/1:6,17:23:15.64:107,0,16	0/0:17,0:17:7.59:0,8,245	1/1:16,1:17:35.06:369,35,0	1/1:14,2:15:29.95:298,30,0	1/1:21,0:17:32.26:229,32,0	0/0:19,0:19:20.02:0,20,220	1/1:13,1:15:26.91:292,27,0	1/1:19,1:20:44.84:392,45,0	0/0:12,0:11:13.25:0,13,110	1/1:35,0:34:61.90:679,62,0	1/1:20,1:20:32.97:310,33,0	1/1:8,0:7:19.45:142,19,0
chr10	90784251	.	T	TGTGTGTGT	5790.53	PASS	AB=1.000;AC=40;AF=0.741;AN=54;BaseQRankSum=-5.210;DP=519;FS=0.000;HRun=0;HaplotypeScore=189.4378;InbreedingCoeff=0.2719;MQ=46.84;MQ0=14;MQRankSum=1.660;QD=13.01;ReadPosRankSum=1.387;VQSLOD=3.8091;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:24.23:0,24,476	0/0:12,0:11:8.96:0,9,69	./.	0/0:14,0:5:0.44:0,0,1	0/1:15,0:14:6.94:108,0,7	1/1:29,0:29:6.82:322,7,0	1/1:20,0:18:3.48:37,3,0	1/1:17,0:16:8.92:106,9,0	1/1:27,0:26:22.81:419,23,0	1/1:28,0:28:38.28:663,38,0	1/1:18,0:18:5.71:202,6,0	1/1:16,0:16:24.08:535,24,0	1/1:27,0:26:20.72:509,21,0	0/1:16,0:16:10.73:277,0,11	1/1:22,0:21:3.20:14,3,0	1/1:25,0:25:21.05:533,21,0	0/1:19,0:17:97.57:98,0,237	1/1:13,0:12:12:259,12,0	1/1:10,0:10:15:253,15,0	1/1:14,0:12:3.84:167,4,0	0/0:14,0:10:2.30:0,2,5	1/1:21,5:29:2.26:72,2,0	1/1:14,0:14:7.63:128,8,0	1/1:19,0:19:6.02:140,6,0	1/1:15,0:14:6.02:174,6,0	0/1:26,0:26:34.36:639,0,34	1/1:22,0:20:5.21:137,5,0	0/0:4,0:2:0.89:0,1,2
chr10	90784281	.	AGAGC	A	1442.05	PASS	AB=0.984;AC=26;AF=0.464;AN=56;BaseQRankSum=4.958;DP=587;FS=8.537;HRun=0;HaplotypeScore=142.6375;InbreedingCoeff=0.5407;MQ=63.90;MQ0=15;MQRankSum=-2.522;QD=4.87;ReadPosRankSum=-5.366;VQSLOD=-0.2557;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:44.81:0,45,896	0/1:14,0:13:19.23:19,0,62	0/0:32,0:9:26.05:0,26,235	0/0:56,0:28:40.76:0,41,422	1/1:16,1:16:17.31:208,17,0	1/1:21,2:23:3.38:22,3,0	1/1:21,3:24:4.73:92,5,0	0/1:28,0:28:9.11:395,0,9	1/1:18,1:18:13.69:92,14,0	0/0:20,0:20:54.02:0,54,1076	0/0:19,0:19:47.91:0,48,901	0/0:16,0:16:35.91:0,36,531	0/0:19,0:19:45.14:0,45,1093	0/0:18,0:17:18.46:0,18,511	1/1:21,0:20:1.43:31,1,0	0/0:27,0:27:60.63:0,61,1200	1/1:14,0:14:8.76:74,9,0	0/0:19,0:19:53.96:0,54,868	1/1:17,0:17:26.13:278,26,0	1/1:15,0:13:1.41:23,1,0	0/1:17,0:17:0.20:0,0,0	0/0:25,0:24:56.78:0,57,1195	0/1:15,0:15:0.05:1,0,0	0/1:17,2:19:6.51:75,0,7	0/0:17,0:16:35.63:0,36,710	0/1:22,0:22:99:172,0,129	1/1:23,0:21:5.85:74,6,0	1/1:8,0:5:8.97:71,9,0
chr10	90784283	.	AGC	A	3158.66	PASS	AB=0.957;AC=31;AF=0.554;AN=56;BaseQRankSum=5.892;DP=590;FS=18.808;HRun=0;HaplotypeScore=122.8827;InbreedingCoeff=0.8399;MQ=66.40;MQ0=15;MQRankSum=-3.325;QD=10.56;ReadPosRankSum=-3.829;VQSLOD=1.4182;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:20.80:0,21,585	1/1:14,0:13:6.66:55,7,0	0/0:33,0:10:28.94:0,29,233	0/0:58,0:30:37.98:0,38,361	1/1:15,2:16:24:256,24,0	1/1:6,17:23:13.77:160,14,0	1/1:5,19:24:20.84:242,21,0	1/1:27,2:29:47.13:663,47,0	1/1:15,5:19:40.06:384,40,0	0/0:20,0:20:53.98:0,54,801	0/0:19,0:19:47.90:0,48,665	0/0:15,0:15:22.91:0,23,396	0/0:17,0:17:45.14:0,45,770	0/0:19,0:18:21.10:0,21,392	1/1:21,0:20:8.42:55,8,0	0/0:27,0:27:60.58:0,61,914	1/1:14,0:14:16.40:102,16,0	0/0:18,0:18:42.25:0,42,578	1/1:15,1:16:36.81:345,37,0	1/1:6,9:13:11.47:113,11,0	1/1:2,16:18:0.47:1,0,0	0/0:26,0:25:62.24:0,62,906	1/1:2,13:15:3.48:47,3,0	1/1:4,14:18:21.04:279,21,0	0/0:17,0:16:36.04:0,36,527	0/1:21,1:22:27.46:396,0,27	1/1:3,19:20:9.03:136,9,0	1/1:11,0:8:17.95:143,18,0
chr10	90784286	.	GAGAGCA	G	2760.77	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-1.113;DP=591;FS=7.741;HRun=0;HaplotypeScore=151.1539;InbreedingCoeff=0.4954;MQ=68.95;MQ0=14;MQRankSum=-2.050;QD=10.66;ReadPosRankSum=-4.321;VQSLOD=-0.0750;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:51.62:0,52,1367	0/1:14,0:13:30.91:98,0,31	0/0:34,0:11:30.03:0,30,473	0/0:59,0:32:59.29:0,59,971	1/1:14,0:14:15.65:260,16,0	0/0:21,0:21:6.96:0,7,22	1/1:27,0:27:4.26:84,4,0	1/1:29,0:29:28.70:774,29,0	1/1:21,0:20:0.45:290,0,0	0/0:18,0:18:54.19:0,54,1616	0/0:19,0:19:48.16:0,48,1276	0/0:15,0:15:33.10:0,33,825	0/0:15,0:15:45.15:0,45,1490	0/0:18,0:17:35.88:0,36,831	0/1:19,0:18:3.83:70,0,4	0/0:28,0:28:75.19:0,75,1820	1/1:15,0:15:10.24:172,10,0	0/0:22,0:22:63.13:0,63,1413	1/1:4,12:16:33.63:506,34,0	0/1:13,0:12:12.96:29,0,13	1/1:18,0:18:1.94:18,2,0	0/0:28,0:27:78.20:0,78,1847	0/0:14,0:14:2.60:0,3,10	0/1:19,0:19:26.86:50,0,27	0/0:17,0:17:45.15:0,45,1184	0/1:21,0:21:99:260,0,144	1/1:22,0:21:2.37:55,2,0	1/1:11,0:9:23.98:283,24,0
chr10	90784290	.	GCA	G	1311.41	PASS	AB=0.975;AC=22;AF=0.393;AN=56;BaseQRankSum=7.958;DP=574;FS=14.065;HRun=0;HaplotypeScore=122.3516;InbreedingCoeff=0.5383;MQ=72.39;MQ0=13;MQRankSum=-2.994;QD=5.44;ReadPosRankSum=2.235;VQSLOD=2.4221;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:57.20:0,57,1101	1/1:12,1:12:22.01:192,22,0	0/0:35,0:12:36.12:0,36,671	0/0:58,0:30:55.45:0,55,982	1/1:14,1:15:7.83:87,8,0	1/1:18,1:19:10.52:85,11,0	0/1:28,1:29:63.38:63,0,67	1/1:24,1:25:3.71:138,4,0	1/1:15,1:16:16.99:135,17,0	0/0:19,0:19:57.20:0,57,1156	0/0:17,1:18:51.17:0,51,977	0/0:14,0:14:39.10:0,39,737	0/0:15,0:15:45.14:0,45,873	0/0:16,0:15:42.10:0,42,790	0/1:20,1:20:0.27:93,0,0	0/0:27,1:28:78.27:0,78,1545	1/1:13,0:13:21.18:251,21,0	0/0:25,0:25:50.19:0,50,1320	0/1:15,0:15:7.43:65,0,7	1/1:12,0:12:3.38:51,3,0	0/0:22,0:22:5.07:0,5,38	0/0:31,0:31:90.29:0,90,1709	0/1:13,0:13:0.40:25,0,0	1/1:17,3:20:2.98:162,3,0	0/0:19,0:19:51.17:0,51,1018	0/1:12,1:13:95.30:95,0,101	0/1:17,0:16:6.72:56,0,7	0/0:10,0:9:12.73:0,13,75
chr10	90785051	.	T	TA	831.78	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-1.389;DP=512;FS=23.039;HRun=6;HaplotypeScore=87.1316;InbreedingCoeff=0.7734;MQ=70.91;MQ0=20;MQRankSum=-1.539;QD=8.00;ReadPosRankSum=0.296;VQSLOD=0.0814;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:75.05:0,75,728	1/1:1,9:10:25.89:306,26,0	0/1:49,0:14:7.10:7,0,132	0/0:53,1:17:28.26:0,28,224	0/0:24,0:23:36.03:0,36,344	0/0:13,0:13:29.98:0,30,284	0/0:12,0:12:23.98:0,24,226	0/0:28,0:28:64.73:0,65,638	0/0:14,0:14:27.04:0,27,264	0/0:19,0:19:41.85:0,42,408	0/0:19,0:18:38.98:0,39,365	0/0:10,0:10:8.93:0,9,92	0/0:5,0:5:5.98:0,6,52	0/0:6,0:6:15.01:0,15,141	1/1:8,6:12:12.04:151,12,0	0/0:15,0:15:33.06:0,33,329	1/1:8,21:28:42.09:510,42,0	0/0:24,1:25:16.34:0,16,457	0/0:22,0:21:51.06:0,51,497	0/0:14,0:14:24.01:0,24,232	0/0:8,0:8:12:0,12,114	0/0:11,0:11:21.04:0,21,210	0/0:17,0:17:38.96:0,39,354	0/0:7,0:7:14.97:0,15,135	0/0:17,0:17:35.82:0,36,325	0/0:14,0:14:24.01:0,24,230	0/0:16,0:16:35.60:0,36,312	0/0:5,0:4:12.03:0,12,122
chr10	90785093	.	TTTTC	T	1465.46	PASS	AB=0.850;AC=30;AF=0.536;AN=56;BaseQRankSum=7.459;DP=425;FS=38.879;HRun=0;HaplotypeScore=62.0163;InbreedingCoeff=0.6890;MQ=45.56;MQ0=28;MQRankSum=-5.652;QD=7.71;ReadPosRankSum=3.744;VQSLOD=0.1773;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:65:0,65,614	1/1:5,0:5:1.92:8,2,0	0/0:37,0:5:14.87:0,15,156	0/0:47,0:4:9.05:0,9,60	1/1:11,0:9:11.14:101,11,0	1/1:11,1:11:18.80:186,19,0	1/1:4,8:10:2.97:43,3,0	1/1:19,0:18:30.67:287,31,0	1/1:5,1:6:5.91:41,6,0	0/0:15,0:14:36.15:0,36,340	0/0:22,0:21:41:0,41,332	0/0:7,0:6:6:0,6,91	0/0:8,0:8:23.93:0,24,298	0/0:10,0:9:17.93:0,18,204	1/1:8,1:7:5.88:54,6,0	0/0:15,0:15:38.88:0,39,407	1/1:25,1:22:14.01:127,14,0	0/0:24,0:24:49.28:0,49,553	0/1:8,6:12:5.19:68,0,5	1/1:13,0:11:13.09:142,13,0	1/1:5,1:6:5.93:53,6,0	0/0:5,0:5:2.96:0,3,19	1/1:10,1:10:17.51:158,18,0	1/1:11,0:10:5.12:67,5,0	0/0:14,0:14:26.70:0,27,209	0/1:12,0:12:5.22:129,0,5	1/1:13,0:13:12.60:141,13,0	1/1:10,0:8:2.93:59,3,0
chr10	90785094	.	TTTC	T	1356.52	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=6.539;DP=381;FS=13.499;HRun=0;HaplotypeScore=51.5157;InbreedingCoeff=0.7973;MQ=46.10;MQ0=26;MQRankSum=-5.907;QD=8.59;ReadPosRankSum=2.335;VQSLOD=1.2543;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:56.03:0,56,406	1/1:3,0:3:4.18:23,4,0	0/0:35,0:5:14.79:0,15,136	0/0:43,0:3:7.35:0,7,44	1/1:9,0:7:11.75:83,12,0	1/1:12,0:11:21.13:178,21,0	1/1:10,1:9:3.01:30,3,0	1/1:15,1:16:32.22:249,32,0	1/1:4,0:4:5.95:41,6,0	0/0:14,0:13:24.56:0,25,220	0/0:22,0:21:22.84:0,23,185	0/0:7,0:6:6:0,6,79	0/0:9,0:9:20.69:0,21,193	0/0:9,0:8:11.97:0,12,133	1/1:7,1:6:5.95:48,6,0	0/0:14,0:14:35.54:0,36,313	1/1:18,1:15:14.73:134,15,0	0/0:24,0:24:44.77:0,45,444	1/1:10,0:8:12.17:85,12,0	1/1:8,3:9:11.92:107,12,0	1/1:2,4:6:6.01:67,6,0	0/0:6,0:6:0:0,0,0	1/1:9,0:8:17.65:129,18,0	1/1:8,1:8:5.80:54,6,0	0/0:10,0:10:14.13:0,14,98	1/1:11,1:12:16.61:145,17,0	1/1:12,0:12:14.51:141,15,0	1/1:6,1:5:5.13:48,5,0
chr10	90785095	.	TTC	T	1214.29	PASS	AC=32;AF=0.593;AN=54;BaseQRankSum=5.546;DP=353;FS=1.504;HRun=0;HaplotypeScore=45.3108;InbreedingCoeff=0.7984;MQ=46.06;MQ0=24;MQRankSum=-6.456;QD=8.49;ReadPosRankSum=0.187;VQSLOD=2.6496;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:30.86:0,31,217	1/1:2,0:2:4.78:25,5,0	0/0:35,0:5:11.83:0,12,94	0/0:39,1:3:5.37:0,5,36	1/1:5,3:6:11.88:83,12,0	1/1:10,1:10:26.18:166,26,0	1/1:11,0:9:2.99:23,3,0	1/1:15,1:16:32.51:225,33,0	1/1:3,0:3:5.95:41,6,0	0/0:12,0:12:20.94:0,21,187	0/0:22,0:21:22.01:0,22,140	0/0:6,0:5:6:0,6,66	0/0:9,0:9:14.80:0,15,126	0/0:8,0:7:9.01:0,9,92	1/1:7,2:7:8.94:67,9,0	0/0:13,0:13:26.87:0,27,223	1/1:14,1:11:14.93:114,15,0	0/0:22,1:23:17.98:0,18,309	1/1:8,0:6:13.71:90,14,0	1/1:8,0:7:11.91:86,12,0	1/1:5,0:5:5.98:47,6,0	./.	1/1:6,3:8:14.64:102,15,0	1/1:6,1:6:5.98:48,6,0	0/0:11,0:11:10.15:0,10,63	1/1:12,1:13:20.52:154,21,0	1/1:9,2:11:6.78:102,7,0	1/1:7,0:5:5.95:44,6,0
chr10	90785096	.	TC	T	1130.64	PASS	AB=1.000;AC=34;AF=0.630;AN=54;BaseQRankSum=4.641;DP=314;FS=5.443;HRun=1;HaplotypeScore=39.4685;InbreedingCoeff=0.6988;MQ=46.58;MQ0=21;MQRankSum=-5.850;QD=6.85;ReadPosRankSum=-0.125;VQSLOD=0.5069;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:21:4.79:5,0,179	1/1:2,0:2:5.94:40,6,0	0/0:30,0:4:11.85:0,12,92	0/0:35,0:2:5.60:0,6,38	1/1:8,0:6:12.21:72,12,0	1/1:10,0:10:24.72:140,25,0	1/1:11,0:9:2.92:17,3,0	1/1:4,12:16:33.07:219,33,0	1/1:3,0:3:5.95:41,6,0	0/0:8,1:9:4.03:0,4,134	0/0:17,1:17:22.80:0,23,141	0/0:7,0:6:9:0,9,81	0/1:8,0:8:0.68:1,0,72	0/0:6,0:5:8.76:0,9,71	1/1:9,0:7:8.86:60,9,0	0/0:12,0:12:10.34:0,10,178	1/1:12,0:9:14.80:101,15,0	0/0:21,0:21:29.49:0,29,271	1/1:8,0:6:14.89:107,15,0	1/1:8,0:7:11.66:68,12,0	1/1:5,0:5:5.83:34,6,0	./.	1/1:8,0:8:16.74:95,17,0	1/1:7,0:6:6.39:42,6,0	0/0:8,0:8:11.33:0,11,67	1/1:11,0:11:21:146,21,0	1/1:10,0:10:14.58:95,15,0	1/1:6,0:5:7.31:40,7,0
chr10	90786216	.	A	AT	2072.89	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-11.105;DP=686;FS=6.672;HRun=6;HaplotypeScore=91.8178;InbreedingCoeff=0.9937;MQ=85.01;MQ0=0;MQRankSum=-2.065;QD=30.04;ReadPosRankSum=1.605;VQSLOD=4.0041;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,1272	1/1:4,11:15:27.09:340,27,0	0/0:22,0:22:50.67:0,51,486	0/0:28,0:28:60.01:0,60,567	0/0:26,0:26:72.14:0,72,728	0/0:31,0:31:87.18:0,87,881	0/0:25,0:25:72.12:0,72,720	0/0:21,0:21:54.09:0,54,543	0/0:28,0:28:75.17:0,75,765	0/0:29,0:29:63.13:0,63,638	0/0:20,0:20:51.11:0,51,520	0/0:26,0:26:72.16:0,72,735	0/0:21,0:21:51.11:0,51,520	0/0:20,0:20:54.12:0,54,551	1/1:1,26:27:78.25:981,78,0	0/0:27,0:27:78.18:0,78,796	1/1:2,25:27:72.22:895,72,0	0/0:17,0:17:48.11:0,48,489	0/0:21,0:21:57.10:0,57,573	0/0:27,0:27:72.16:0,72,735	0/0:46,0:46:99:0,132,1339	0/0:27,0:27:63.12:0,63,636	0/0:18,0:18:48.08:0,48,477	0/0:21,0:20:54.12:0,54,551	0/0:11,0:11:33.08:0,33,337	0/0:32,0:32:87.18:0,87,882	0/0:22,0:22:60.14:0,60,612	0/0:6,0:6:14.92:0,15,129
chr10	90786348	.	C	CTG	18803.34	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-18.501;DP=730;FS=7.247;HRun=0;HaplotypeScore=78.9612;InbreedingCoeff=0.9975;MQ=73.54;MQ0=6;MQRankSum=-3.416;QD=43.03;ReadPosRankSum=1.844;VQSLOD=6.0096;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,1558	1/1:2,6:8:15.05:258,15,0	0/0:21,0:19:41.79:0,42,503	0/0:17,0:16:42.08:0,42,508	1/1:2,30:32:72.25:1262,72,0	1/1:1,21:22:57.20:999,57,0	1/1:4,28:32:75.26:1315,75,0	1/1:3,23:26:69.20:1179,69,0	1/1:3,20:22:51.17:894,51,0	0/0:31,0:31:90.30:0,90,1218	0/0:10,0:10:24.08:0,24,325	0/0:30,0:30:72.22:0,72,958	0/0:28,0:28:75.23:0,75,992	0/0:22,0:22:60.20:0,60,812	1/1:4,27:30:69.24:1210,69,0	0/0:21,0:21:54.18:0,54,731	1/1:1,22:22:60.21:1052,60,0	0/0:29,0:29:81.27:0,81,1095	1/1:0,29:29:84.26:1442,84,0	1/1:1,17:17:48.16:842,48,0	1/1:9,54:63:99:2781,160,0	0/0:20,0:20:60.20:0,60,811	1/1:2,15:17:36.12:631,36,0	1/1:2,23:25:63.22:1104,63,0	0/0:22,0:22:63.21:0,63,852	1/1:3,32:36:61.73:1627,62,0	1/1:4,31:35:90.31:1576,90,0	1/1:3,12:15:36.12:631,36,0
chr10	90786620	.	TA	T	8552.77	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=13.341;DP=517;FS=8.345;HRun=2;HaplotypeScore=53.1622;InbreedingCoeff=0.9953;MQ=77.54;MQ0=0;MQRankSum=-1.836;QD=36.71;ReadPosRankSum=-0.782;VQSLOD=4.6396;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.26:0,78,1169	0/0:9,0:9:27.09:0,27,405	0/0:12,0:12:29.13:0,29,412	0/0:10,0:10:12.29:0,12,283	1/1:0,22:22:60.20:779,60,0	1/1:0,26:26:75.24:974,75,0	1/1:0,14:14:39.13:506,39,0	1/1:0,17:17:51.15:648,51,0	1/1:0,11:11:30.10:390,30,0	0/0:21,0:21:63.21:0,63,928	0/0:19,0:19:45.15:0,45,673	0/0:12,0:12:36.12:0,36,540	0/0:15,0:15:42.14:0,42,630	0/0:18,0:18:51.17:0,51,764	0/0:18,0:18:54.18:0,54,809	0/0:26,0:26:75.25:0,75,1123	0/0:28,0:28:84.26:0,84,1234	0/0:32,0:32:96.31:0,96,1418	1/1:2,11:13:33.11:429,33,0	1/1:0,26:26:75.24:974,75,0	1/1:0,16:16:48.16:623,48,0	0/0:17,0:17:51.15:0,51,723	1/1:0,21:21:57.19:740,57,0	1/1:0,10:10:27.09:351,27,0	0/0:21,0:21:63.19:0,63,921	1/1:1,17:18:51.17:659,51,0	1/1:0,30:30:87.28:1130,87,0	1/1:0,9:9:27.09:350,27,0
chr10	90787685	.	AAC	A	1601.63	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.652;DP=671;FS=4.731;HRun=0;HaplotypeScore=105.2128;InbreedingCoeff=0.9984;MQ=78.69;MQ0=2;MQRankSum=0.848;QD=8.52;ReadPosRankSum=2.269;VQSLOD=2.8318;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.26:0,90,1442	0/0:16,0:16:48.09:0,48,482	0/0:49,0:34:71.80:0,72,1133	0/0:31,0:22:33.84:0,34,375	0/0:23,0:23:69.20:0,69,1124	0/0:17,0:17:48.15:0,48,829	0/0:19,0:19:57.18:0,57,958	0/0:32,0:31:87.24:0,87,1338	0/0:29,0:29:87.28:0,87,1458	1/1:21,0:21:41.37:263,41,0	1/1:22,1:23:39.84:255,40,0	1/1:19,2:21:37.18:207,37,0	1/1:20,0:20:41.54:160,42,0	1/1:22,1:23:33.64:173,34,0	0/0:23,0:23:66.58:0,67,652	1/1:22,1:23:47.15:214,47,0	0/0:24,0:24:69.51:0,70,663	1/1:16,0:16:31.16:120,31,0	0/0:17,0:17:51.17:0,51,878	0/0:31,0:31:93.27:0,93,1488	0/0:28,0:28:81.25:0,81,1371	1/1:14,2:16:35.69:221,36,0	0/0:30,0:30:90.26:0,90,1482	0/0:23,0:23:69.14:0,69,1070	1/1:22,3:25:27.45:204,27,0	0/0:24,0:24:51.40:0,51,975	0/0:30,0:29:90.27:0,90,1473	0/0:7,0:7:18.06:0,18,311
chr10	90787686	.	AC	A	5372.28	PASS	AB=0.926;AC=19;AF=0.339;AN=56;BaseQRankSum=8.252;DP=665;FS=3.550;HRun=1;HaplotypeScore=78.3829;InbreedingCoeff=0.9291;MQ=77.85;MQ0=2;MQRankSum=1.557;QD=25.46;ReadPosRankSum=2.321;VQSLOD=4.9277;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.14:0,90,1129	0/0:16,0:16:48.14:0,48,590	0/0:46,0:33:79.27:0,79,894	0/0:27,0:19:31.22:0,31,260	0/0:23,0:23:69.18:0,69,885	0/0:17,0:17:48.15:0,48,652	0/0:20,0:20:60.17:0,60,783	0/0:33,0:32:93.06:0,93,1120	0/0:29,0:29:87.20:0,87,1142	1/1:1,20:21:59.30:747,59,0	1/1:2,21:23:58.57:722,59,0	1/1:2,19:21:42.03:539,42,0	1/1:0,20:20:48.16:669,48,0	1/1:1,22:23:38.63:499,39,0	0/0:22,0:22:66.18:0,66,801	1/1:1,22:23:54.13:730,54,0	0/0:24,0:24:72.10:0,72,827	1/1:0,15:15:36.12:501,36,0	0/0:17,0:17:51.17:0,51,693	0/0:31,0:31:93.22:0,93,1178	0/0:27,0:27:81.25:0,81,1084	1/1:2,14:16:41.87:452,42,0	0/0:32,0:32:96.23:0,96,1220	0/0:23,0:23:69.13:0,69,865	1/1:5,19:24:44.71:505,45,0	0/1:23,2:25:8.26:8,0,753	0/0:30,0:29:90.25:0,90,1166	0/0:7,0:7:18.06:0,18,245
chr10	90788802	.	T	TTTTTG	12516.77	PASS	AB=0.569;AC=40;AF=0.714;AN=56;BaseQRankSum=1.644;DP=628;FS=5.504;HRun=0;HaplotypeScore=114.5622;InbreedingCoeff=0.0800;MQ=62.61;MQ0=6;MQRankSum=-1.348;QD=23.84;ReadPosRankSum=8.660;VQSLOD=3.2754;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:75.11:0,75,1175	0/1:3,0:7:39.19:102,0,39	0/0:39,0:19:30.42:0,30,328	0/0:35,0:13:6.10:0,6,208	0/1:6,1:26:33.08:636,0,33	0/1:2,1:17:13.37:441,0,13	1/1:3,0:27:32.84:752,33,0	0/1:7,0:27:2.52:597,0,3	0/1:1,0:8:11.20:113,0,11	1/1:6,0:32:1.29:744,1,0	1/1:3,0:22:4.10:476,4,0	1/1:1,0:14:21:328,21,0	1/1:1,0:13:12.04:192,12,0	1/1:1,0:20:27.09:418,27,0	1/1:1,0:11:15.05:242,15,0	1/1:2,0:16:24.97:398,25,0	1/1:5,0:29:22.73:620,23,0	1/1:3,1:30:24.44:927,24,0	0/1:6,0:17:10.42:317,0,10	1/1:3,0:27:39.91:939,40,0	0/1:2,0:11:6.08:179,0,6	1/1:1,1:23:48.53:804,49,0	1/1:3,0:17:9.73:407,10,0	1/1:2,0:23:45.25:727,45,0	1/1:2,1:19:3.87:392,4,0	0/1:8,0:28:13.11:736,0,13	0/1:8,1:38:99:768,0,107	0/1:4,0:21:19.52:261,0,20
chr10	90789454	.	CGA	C	1056.12	PASS	AB=0.857;AC=41;AF=0.788;AN=52;BaseQRankSum=0.913;DP=524;FS=7.561;HRun=0;HaplotypeScore=76.2371;InbreedingCoeff=0.2314;MQ=69.78;MQ0=11;MQRankSum=1.283;QD=2.68;ReadPosRankSum=0.860;VQSLOD=0.8200;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,8:32:3:32,3,0	1/1:10,0:10:2.97:20,3,0	0/0:22,0:14:0:0,0,0	./.	1/1:16,1:16:3.01:32,3,0	1/1:19,0:20:2.84:14,3,0	1/1:24,0:23:2.89:19,3,0	0/0:14,0:14:0.89:0,1,2	1/1:18,6:25:7.60:104,8,0	0/0:18,0:19:1.25:0,1,3	0/0:16,0:19:0:0,0,0	1/1:13,0:15:5.68:28,6,0	1/1:11,0:15:5.65:28,6,0	1/1:21,0:23:8.12:34,8,0	1/1:12,3:15:6.02:64,6,0	1/1:15,0:17:13.53:53,14,0	1/1:26,2:30:25.99:199,26,0	1/1:9,3:12:5.85:46,6,0	./.	0/0:11,3:14:0:0,0,0	1/1:17,0:15:8.07:50,8,0	1/1:8,0:9:3.73:16,4,0	1/1:11,0:13:1.82:5,2,0	1/1:32,3:36:30.37:241,30,0	0/1:15,0:18:8.12:8,0,16	1/1:15,0:14:3.01:30,3,0	1/1:20,2:22:10.15:77,10,0	1/1:7,1:8:6.32:47,6,0
chr10	90790582	.	GGT	G	8222.83	PASS	AB=0.524;AC=31;AF=0.554;AN=56;BaseQRankSum=6.750;DP=411;FS=7.184;HRun=0;HaplotypeScore=64.5900;InbreedingCoeff=0.8884;MQ=70.36;MQ0=4;MQRankSum=-5.566;QD=34.26;ReadPosRankSum=1.674;VQSLOD=7.0909;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.31:0,90,1609	1/1:1,8:9:18.06:249,18,0	0/0:31,0:22:52.30:0,52,836	0/0:22,0:18:5.58:0,6,582	1/1:1,14:15:27.09:378,27,0	1/1:0,16:16:42.10:566,42,0	1/1:0,14:14:36.12:504,36,0	1/1:2,21:23:63.18:856,63,0	1/1:0,7:7:18.06:252,18,0	0/0:16,0:16:45.15:0,45,810	0/0:14,0:14:33.11:0,33,556	0/0:10,0:10:30.10:0,30,520	0/0:6,0:6:15.05:0,15,252	0/0:10,0:10:27.09:0,27,476	1/1:3,21:24:57.10:754,57,0	0/0:5,0:5:15.05:0,15,270	1/1:0,18:17:45.06:586,45,0	0/0:9,0:9:27.09:0,27,455	1/1:1,21:22:57.18:779,57,0	1/1:1,11:12:33.02:418,33,0	1/1:1,30:31:81.27:1134,81,0	0/0:6,0:6:18.06:0,18,322	1/1:0,6:6:18.02:230,18,0	1/1:1,12:13:32.75:417,33,0	0/0:8,0:8:24.08:0,24,414	0/1:1,10:11:20.88:365,0,21	1/1:1,16:16:48.15:652,48,0	1/1:0,2:2:6.02:84,6,0
chr10	90790758	.	AT	A	3786.22	PASS	AB=0.694;AC=29;AF=0.518;AN=56;BaseQRankSum=9.113;DP=413;FS=48.287;HRun=10;HaplotypeScore=65.6882;InbreedingCoeff=0.7805;MQ=60.59;MQ0=5;MQRankSum=-1.316;QD=15.39;ReadPosRankSum=1.916;VQSLOD=0.8039;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,105,1150	0/1:3,3:6:1.17:66,0,1	0/0:16,0:11:17.88:0,18,175	0/0:6,0:6:5.96:0,6,53	1/1:10,8:14:22.07:205,22,0	1/1:4,6:8:14.99:130,15,0	1/1:5,5:10:7.78:139,8,0	1/1:12,11:23:32.93:286,33,0	1/1:5,6:10:17.96:156,18,0	0/0:12,0:11:26.44:0,26,273	0/0:15,0:15:45.11:0,45,489	0/0:16,0:17:50.97:0,51,544	0/0:7,0:7:18.05:0,18,199	0/0:15,0:15:33.09:0,33,364	1/1:4,10:14:19.04:246,19,0	0/0:7,0:7:21.03:0,21,216	1/1:3,23:25:65.94:566,66,0	0/0:18,0:18:48.03:0,48,502	1/1:12,13:25:40.78:344,41,0	1/1:7,6:13:13.38:172,13,0	1/1:3,13:16:29.98:260,30,0	0/0:3,0:3:9.02:0,9,100	0/1:8,4:12:15.19:112,0,15	1/1:3,15:17:47.89:407,48,0	0/0:11,0:10:30.08:0,30,330	1/1:9,8:17:25.96:232,26,0	1/1:3,13:16:38.99:338,39,0	0/1:5,5:10:10.18:125,0,10
chr10	90790858	.	CT	C	6223.32	PASS	AB=0.626;AC=16;AF=0.286;AN=56;BaseQRankSum=12.040;DP=574;FS=32.483;HRun=1;HaplotypeScore=113.8304;InbreedingCoeff=-0.3958;MQ=53.73;MQ0=6;MQRankSum=-6.840;QD=18.30;ReadPosRankSum=2.870;VQSLOD=3.4055;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1791	0/1:1,8:9:21.85:267,0,22	0/0:15,0:10:27.08:0,27,396	0/0:25,0:17:42:0,42,532	0/1:9,16:25:99:515,0,256	0/1:11,9:20:99:247,0,311	0/1:8,12:18:99:335,0,138	0/1:18,17:35:99:594,0,526	0/1:3,11:14:15.81:345,0,16	0/0:22,0:21:54.13:0,54,751	0/0:13,0:13:39.13:0,39,596	0/0:19,0:19:57.15:0,57,809	0/0:11,0:11:33.11:0,33,496	0/0:19,0:19:57.19:0,57,867	0/1:7,10:16:99:287,0,184	0/0:9,0:8:27.06:0,27,388	0/1:10,24:34:99:713,0,148	0/0:35,0:35:99:0,102,1484	0/1:8,10:17:99:203,0,279	0/1:16,15:30:99:540,0,424	0/1:7,8:15:99:175,0,214	0/0:17,0:17:51.17:0,51,780	0/1:11,14:24:99:472,0,344	0/1:3,13:16:99:339,0,102	0/0:9,0:9:24.08:0,24,366	0/1:9,16:25:99:553,0,337	0/1:11,17:28:99:531,0,329	0/1:5,3:6:99:107,0,119
chr10	90792594	.	TC	T	6161.37	PASS	AB=0.804;AC=54;AF=0.964;AN=56;BaseQRankSum=3.602;DP=429;FS=4.617;HRun=2;HaplotypeScore=320.1202;InbreedingCoeff=-0.0400;MQ=37.56;MQ0=0;MQRankSum=-3.888;QD=14.36;ReadPosRankSum=1.478;VQSLOD=3.9298;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,1:12:22.39:125,22,0	1/1:11,0:11:30.74:158,31,0	0/1:2,1:2:29.62:32,0,30	0/1:10,2:12:47.14:47,0,210	1/1:31,4:35:84.07:507,84,0	1/1:24,2:26:27.30:306,27,0	1/1:11,2:13:33.77:201,34,0	1/1:18,4:22:59.34:458,59,0	1/1:17,0:17:41.57:186,42,0	1/1:15,1:16:44.09:296,44,0	1/1:21,0:21:49.17:211,49,0	1/1:10,0:10:27.95:150,28,0	1/1:13,3:16:45.05:261,45,0	1/1:12,0:12:25.12:105,25,0	1/1:15,0:15:40.93:173,41,0	1/1:21,0:21:52.92:241,53,0	1/1:16,0:16:39.71:261,40,0	1/1:7,1:8:17.81:159,18,0	1/1:10,1:12:23.76:228,24,0	1/1:25,0:25:55.88:316,56,0	1/1:2,0:2:5.59:25,6,0	1/1:14,1:15:39.08:275,39,0	1/1:10,4:14:34:267,34,0	1/1:8,1:9:15.58:85,16,0	1/1:11,2:13:33.81:224,34,0	1/1:15,3:18:53.13:382,53,0	1/1:25,3:28:64.42:372,64,0	1/1:7,0:7:20.27:109,20,0
chr10	90792595	.	C	CT	5689.55	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=3.661;DP=413;FS=4.633;HRun=1;HaplotypeScore=313.0647;InbreedingCoeff=0.5363;MQ=37.46;MQ0=0;MQRankSum=-4.050;QD=14.15;ReadPosRankSum=1.382;VQSLOD=4.1998;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:10:22.73:134,23,0	1/1:0,11:11:30.84:159,31,0	0/1:3,0:2:26.58:32,0,27	0/0:11,0:11:9.03:0,9,200	1/1:4,31:35:85.54:419,86,0	1/1:3,23:26:32.32:294,32,0	1/1:2,11:13:34.14:173,34,0	1/1:5,16:21:59.23:393,59,0	1/1:0,16:16:42.29:205,42,0	1/1:1,14:15:44.22:291,44,0	1/1:0,20:20:50.73:233,51,0	1/1:0,10:10:28.33:141,28,0	1/1:3,13:16:45.50:230,45,0	1/1:0,10:10:26.32:117,26,0	1/1:0,15:15:41.78:192,42,0	1/1:0,20:20:53.78:265,54,0	1/1:0,16:16:40.06:217,40,0	1/1:1,5:6:17.72:122,18,0	1/1:2,9:11:26.72:222,27,0	1/1:0,25:25:56.64:298,57,0	1/1:0,2:2:5.67:28,6,0	1/1:1,14:15:39.55:247,40,0	1/1:4,10:14:34.26:216,34,0	1/1:1,8:9:16.01:71,16,0	1/1:2,11:13:34.11:175,34,0	1/1:3,15:18:53.18:342,53,0	1/1:3,22:25:65.23:354,65,0	1/1:0,7:7:20.44:118,20,0
chr10	90792597	.	TC	T	2777.60	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=5.102;DP=412;FS=3.900;HRun=2;HaplotypeScore=322.1839;InbreedingCoeff=0.8170;MQ=35.36;MQ0=0;MQRankSum=-3.048;QD=6.96;ReadPosRankSum=3.948;VQSLOD=1.0636;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:10:17.86:58,18,0	1/1:1,10:11:24.81:84,25,0	0/0:3,0:2:5.50:0,6,42	0/0:10,0:10:26.18:0,26,282	1/1:4,31:35:57.60:167,58,0	1/1:3,23:26:19.93:158,20,0	1/1:2,11:13:24.79:80,25,0	1/1:5,16:21:41.62:219,42,0	1/1:0,16:16:34.50:116,35,0	1/1:1,14:15:38.01:188,38,0	1/1:0,20:20:33.85:99,34,0	1/1:0,10:10:21.92:72,22,0	1/1:3,13:16:35.90:121,36,0	1/1:0,10:10:17.13:57,17,0	1/1:0,15:15:32.68:103,33,0	1/1:0,20:20:47.40:173,47,0	1/1:0,16:16:30.25:105,30,0	1/1:1,5:6:11.75:64,12,0	1/1:1,10:11:15.96:141,16,0	1/1:0,25:25:46.15:158,46,0	1/1:0,2:2:4.72:16,5,0	1/1:2,13:15:26.60:80,27,0	1/1:4,10:14:25.72:87,26,0	1/1:1,8:9:9.96:28,10,0	1/1:2,11:13:26.57:93,27,0	1/1:3,15:18:39.91:191,40,0	1/1:3,22:25:46.76:164,47,0	1/1:0,7:7:18.62:76,19,0
chr10	90792636	.	A	AT	1702.57	PASS	AB=0.933;AC=27;AF=0.500;AN=54;BaseQRankSum=2.139;DP=328;FS=6.234;HRun=0;HaplotypeScore=248.2202;InbreedingCoeff=0.4933;MQ=49.92;MQ0=5;MQRankSum=0.111;QD=9.62;ReadPosRankSum=-5.474;VQSLOD=1.8593;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:17.47:0,17,98	0/1:11,0:12:19.93:56,0,20	0/0:26,0:9:17.26:0,17,193	0/0:29,0:9:11.37:0,11,164	1/1:16,4:20:5.68:86,6,0	1/1:17,3:20:52.13:437,52,0	1/1:6,1:7:14.38:130,14,0	1/1:6,0:6:6.92:26,7,0	1/1:10,8:18:37.91:329,38,0	0/0:15,0:15:23.10:0,23,193	0/0:17,0:17:24.22:0,24,223	0/0:10,0:10:26.22:0,26,147	0/0:9,0:9:26.08:0,26,144	0/1:5,0:5:9.10:9,0,51	1/1:16,0:16:35.84:257,36,0	0/0:22,0:22:25.19:0,25,276	0/1:7,0:7:19.63:20,0,31	0/0:5,0:5:14.28:0,14,72	0/1:9,0:9:10.21:35,0,10	0/1:10,2:12:1.56:63,0,2	1/1:2,2:4:8.80:75,9,0	0/0:8,0:8:17.08:0,17,90	1/1:5,2:7:12.08:124,12,0	./.	0/1:10,0:10:12.84:13,0,83	0/1:6,3:9:0.50:45,0,0	1/1:12,1:13:17.42:141,17,0	1/1:1,1:2:5.88:51,6,0
chr10	90792640	.	T	TTC	3472.40	PASS	AB=1.000;AC=32;AF=0.593;AN=54;BaseQRankSum=-0.441;DP=348;FS=1.760;HRun=0;HaplotypeScore=252.9770;InbreedingCoeff=0.7851;MQ=46.83;MQ0=7;MQRankSum=-0.231;QD=18.67;ReadPosRankSum=-6.355;VQSLOD=2.0620;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:20.42:0,20,124	1/1:11,0:12:7.17:88,7,0	0/0:25,0:8:14.98:0,15,187	0/0:29,0:9:14.48:0,14,135	1/1:19,1:20:9.66:92,10,0	1/1:20,0:20:56.85:598,57,0	1/1:6,1:7:17.92:175,18,0	1/1:5,1:6:18.06:261,18,0	1/1:17,1:18:51.84:543,52,0	0/0:17,0:15:23.77:0,24,287	0/0:17,0:17:20.88:0,21,202	0/0:10,0:10:26.40:0,26,174	0/0:12,0:11:26.65:0,27,188	0/1:6,0:6:9.13:9,0,41	1/1:11,0:16:31.36:251,31,0	0/0:23,0:23:23.18:0,23,323	1/1:7,0:7:8.94:46,9,0	0/0:6,0:6:14.91:0,15,111	1/1:7,3:10:29.04:377,29,0	1/1:12,0:12:20.86:184,21,0	1/1:5,0:4:9.41:78,9,0	0/0:11,0:10:17.19:0,17,110	1/1:8,0:7:14.92:133,15,0	./.	0/1:14,0:13:12.50:12,0,98	1/1:7,2:9:9.51:276,10,0	1/1:10,2:13:29.89:285,30,0	1/1:3,0:2:6.01:64,6,0
chr10	90792643	.	CTCTCTTT	C	940.80	PASS	AB=0.875;AC=24;AF=0.429;AN=56;BaseQRankSum=3.931;DP=365;FS=9.168;HRun=0;HaplotypeScore=279.0144;InbreedingCoeff=0.6461;MQ=46.05;MQ0=8;MQRankSum=-0.675;QD=6.72;ReadPosRankSum=-1.381;VQSLOD=0.9282;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:27.47:0,27,454	0/1:12,0:12:34.12:46,0,34	0/0:25,0:8:13.89:0,14,213	0/0:29,0:9:19.82:0,20,175	0/0:16,4:20:2.94:0,3,18	1/1:17,3:20:26.18:150,26,0	1/1:6,1:7:8.83:54,9,0	1/1:6,0:6:17.68:112,18,0	1/1:10,8:18:24.46:193,24,0	0/0:21,0:19:54.15:0,54,1302	0/0:17,0:17:42.14:0,42,738	0/0:12,0:11:27.09:0,27,553	0/0:13,0:12:29.93:0,30,670	0/0:7,0:7:9.50:0,10,164	1/1:16,0:16:3:39,3,0	0/0:24,0:24:60.12:0,60,1213	0/0:7,0:7:8.81:0,9,66	0/0:7,0:7:21.07:0,21,529	1/1:11,0:10:7.10:82,7,0	1/1:10,2:12:4.16:49,4,0	1/1:3,2:4:1.62:16,2,0	0/0:14,0:12:18.46:0,18,274	1/1:6,2:7:5.90:37,6,0	0/0:1,1:2:0:0,0,0	0/0:16,0:15:27.47:0,27,530	0/1:6,3:9:31.96:212,0,32	1/1:12,1:13:7.56:68,8,0	1/1:2,1:2:5.95:75,6,0
chr10	90792645	.	CTCTTT	C	199.88	PASS	AB=0.985;AC=11;AF=0.196;AN=56;BaseQRankSum=3.657;DP=364;FS=2.666;HRun=0;HaplotypeScore=272.2965;InbreedingCoeff=0.2633;MQ=46.04;MQ0=9;MQRankSum=-0.166;QD=2.20;ReadPosRankSum=2.980;VQSLOD=1.7489;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:27.45:0,27,439	0/1:11,1:12:32.85:45,0,33	0/0:25,0:8:14.07:0,14,223	0/0:29,0:9:19.18:0,19,173	0/0:20,0:20:3:0,3,28	0/0:20,0:20:4.66:0,5,25	0/0:7,0:7:1.23:0,1,3	0/0:6,0:6:6.25:0,6,13	1/1:18,0:18:0.08:66,0,0	0/0:21,0:18:54.16:0,54,1128	0/0:17,0:17:42.14:0,42,716	0/0:13,0:12:26.67:0,27,528	0/0:13,0:12:29.93:0,30,595	0/0:7,0:7:9.03:0,9,153	1/1:11,5:16:3.01:39,3,0	0/0:24,0:24:60.15:0,60,1143	0/0:7,0:7:8.77:0,9,52	0/0:7,0:7:21.07:0,21,466	0/0:11,0:10:12.40:0,12,66	0/1:12,0:12:24.70:25,0,26	0/0:5,0:4:1.24:0,1,2	0/0:14,0:12:18.49:0,18,282	0/1:8,0:7:0.01:0,0,0	0/0:2,0:2:0:0,0,0	0/0:14,0:13:27.51:0,28,513	0/1:9,0:9:65.96:89,0,66	0/1:13,0:13:24.36:29,0,24	1/1:3,0:2:3.01:36,3,0
chr10	90792647	.	CTT	C	718.95	PASS	AB=0.963;AC=26;AF=0.481;AN=54;BaseQRankSum=-1.496;DP=371;FS=3.360;HRun=3;HaplotypeScore=257.9068;InbreedingCoeff=0.5394;MQ=45.65;MQ0=11;MQRankSum=-2.576;QD=3.44;ReadPosRankSum=3.078;VQSLOD=-0.1811;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:25.42:0,25,178	1/1:11,2:13:12.20:107,12,0	0/0:26,0:8:7.55:0,8,79	0/1:30,0:9:5.11:5,0,34	1/1:20,0:20:2.12:7,2,0	1/1:19,0:19:2.94:18,3,0	0/1:9,0:9:5.92:12,0,6	1/1:8,0:8:22.55:143,23,0	1/1:15,0:15:11.88:96,12,0	0/1:21,0:18:9.23:9,0,370	0/0:17,0:17:38.57:0,39,259	0/0:13,0:12:26.39:0,26,198	0/0:13,0:12:29.47:0,29,240	0/0:7,0:7:8.89:0,9,61	0/1:14,3:17:0.44:28,0,0	0/0:23,0:23:56.59:0,57,436	1/1:8,0:8:5.55:36,6,0	0/0:7,0:7:17.74:0,18,178	1/1:13,0:12:25.52:163,26,0	1/1:10,0:10:5.95:49,6,0	0/0:5,0:4:1.25:0,1,3	0/0:13,0:11:18.27:0,18,121	./.	0/0:2,0:2:0:0,0,0	0/0:15,0:13:23.77:0,24,177	1/1:9,0:9:3.89:153,4,0	1/1:13,0:14:0.86:36,1,0	1/1:3,0:2:3.01:31,3,0
chr10	90792682	.	TCTCTTGAACA	T	3732.75	PASS	AB=1.000;AC=35;AF=0.648;AN=54;BaseQRankSum=4.116;DP=392;FS=7.642;HRun=0;HaplotypeScore=163.4351;InbreedingCoeff=0.1488;MQ=32.59;MQ0=30;MQRankSum=3.072;QD=15.68;ReadPosRankSum=5.370;VQSLOD=1.5287;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:14:19.72:20,0,57	1/1:3,2:5:8.92:243,9,0	0/0:56,0:6:18.06:0,18,408	0/0:62,0:9:17.71:0,18,289	0/0:9,1:10:0.16:0,0,0	1/1:12,0:12:6.02:99,6,0	1/1:10,0:10:5.90:96,6,0	0/1:14,0:13:41.02:419,0,41	1/1:16,1:17:6.02:190,6,0	0/1:13,0:10:99:107,0,177	0/1:7,0:7:0:0,0,0	1/1:9,0:8:0.93:2,1,0	0/1:8,0:7:30.98:49,0,31	0/0:5,0:4:0:0,0,0	1/1:11,3:13:1.38:91,1,0	1/1:7,0:7:4.17:11,4,0	0/0:3,0:3:0.47:0,0,1	0/1:4,0:4:27.32:27,0,40	0/1:6,0:6:6.36:154,0,6	1/1:14,1:15:1.33:96,1,0	1/1:11,0:10:1.25:3,1,0	1/1:18,0:16:5.17:146,5,0	./.	0/0:4,0:4:0:0,0,1	1/1:18,0:15:15.43:202,15,0	1/1:17,0:16:45.15:930,45,0	1/1:16,0:16:36.12:694,36,0	1/1:2,0:2:6.02:155,6,0
chr10	90792684	.	TCTTGAACA	T	3981.54	PASS	AB=0.951;AC=38;AF=0.704;AN=54;BaseQRankSum=3.333;DP=389;FS=4.717;HRun=0;HaplotypeScore=156.5600;InbreedingCoeff=0.2039;MQ=33.21;MQ0=29;MQRankSum=2.790;QD=15.93;ReadPosRankSum=4.726;VQSLOD=2.3706;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:14:14.22:24,0,14	1/1:4,1:5:8.99:212,9,0	0/0:57,0:6:18.06:0,18,408	0/0:60,0:9:17.78:0,18,276	0/1:9,1:10:0.19:0,0,0	1/1:13,0:13:6.02:102,6,0	1/1:10,0:10:5.53:99,6,0	0/1:12,0:11:14.65:426,0,15	1/1:16,2:18:6.02:162,6,0	0/1:13,0:10:67.47:167,0,67	0/1:6,0:6:0:0,0,0	1/1:9,0:8:3.41:20,3,0	0/1:8,0:7:10.01:64,0,10	0/1:6,0:6:0:0,0,0	1/1:14,0:13:2.09:78,2,0	1/1:7,0:7:8.94:64,9,0	0/0:3,0:3:0.47:0,0,1	0/1:4,0:4:11.04:80,0,11	1/1:5,0:5:9.03:184,9,0	1/1:14,0:14:2.31:83,2,0	1/1:13,0:12:0.89:2,1,0	1/1:17,0:15:4.62:145,5,0	./.	0/0:4,0:4:0:0,0,0	1/1:17,0:14:18.01:254,18,0	1/1:16,1:16:45.15:939,45,0	1/1:14,1:15:36.12:723,36,0	1/1:2,0:2:6.02:155,6,0
chr10	90792685	.	CTTGAACAGTGTGTGTGTGTGTG	C	5523.44	PASS	AB=0.968;AC=31;AF=0.620;AN=50;BaseQRankSum=-2.502;DP=386;FS=9.364;HRun=0;HaplotypeScore=187.8699;InbreedingCoeff=0.1167;MQ=33.26;MQ0=29;MQRankSum=2.369;QD=26.56;ReadPosRankSum=2.259;VQSLOD=3.2714;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:11.50:12,0,100	0/1:5,0:5:30.80:31,0,157	0/0:57,0:6:18.06:0,18,415	0/0:60,0:8:17.96:0,18,353	0/0:6,3:10:0.28:0,0,1	1/1:3,10:13:6.02:365,6,0	1/1:8,2:10:5.22:240,5,0	1/1:12,0:11:18.06:454,18,0	1/1:9,9:18:6.02:135,6,0	0/1:12,0:9:40.37:40,0,344	./.	1/1:9,0:8:4.25:39,4,0	0/1:7,0:6:30.77:31,0,73	0/0:7,0:6:0:0,0,0	1/1:14,0:13:1.38:56,1,0	1/1:7,0:7:9.03:118,9,0	0/0:3,0:3:1.25:0,1,3	0/1:4,0:4:90.26:90,0,165	1/1:4,1:5:9.03:316,9,0	1/1:10,4:14:6.02:105,6,0	1/1:2,11:12:1.25:3,1,0	0/0:17,0:15:8.59:0,9,237	./.	./.	0/1:17,0:14:83.33:83,0,235	0/1:12,5:16:99:1530,0,123	1/1:7,7:15:36.12:1734,36,0	1/1:2,0:2:6.02:141,6,0
chr10	90792686	.	TTGAACA	T	4244.83	PASS	AB=0.762;AC=41;AF=0.820;AN=50;BaseQRankSum=2.016;DP=351;FS=2.656;HRun=0;HaplotypeScore=130.0198;InbreedingCoeff=0.4943;MQ=33.78;MQ0=28;MQRankSum=2.679;QD=20.81;ReadPosRankSum=3.910;VQSLOD=4.7103;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,1:13:7.11:46,7,0	1/1:3,1:5:9.03:183,9,0	0/0:57,0:6:18.06:0,18,408	0/0:59,0:8:17.55:0,18,275	0/1:6,4:10:0:0,0,0	1/1:10,3:13:6.02:102,6,0	1/1:2,7:10:5.83:115,6,0	1/1:0,7:6:18.06:454,18,0	1/1:12,6:18:6.02:135,6,0	1/1:6,1:5:14.72:231,15,0	./.	1/1:6,0:5:3.01:37,3,0	1/1:4,0:4:6.02:90,6,0	0/1:6,0:5:0:0,0,0	1/1:5,7:13:1.64:64,2,0	1/1:6,0:6:9.03:118,9,0	0/0:0,3:3:0.47:0,0,1	1/1:4,0:4:10.28:151,10,0	1/1:1,4:5:9.03:186,9,0	1/1:5,8:13:3.01:69,3,0	./.	1/1:6,1:10:4.95:145,5,0	./.	0/1:1,3:4:0.11:0,0,0	1/1:5,0:9:18.06:309,18,0	1/1:6,10:16:45.15:969,45,0	1/1:9,6:15:36.12:699,36,0	1/1:0,2:2:6.02:141,6,0
chr10	90792687	.	TGAACAG	T	3639.49	PASS	AB=0.848;AC=41;AF=0.820;AN=50;BaseQRankSum=2.144;DP=347;FS=2.714;HRun=0;HaplotypeScore=135.3736;InbreedingCoeff=0.5262;MQ=33.87;MQ0=28;MQRankSum=3.934;QD=18.02;ReadPosRankSum=3.066;VQSLOD=3.3101;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,1:11:12.68:63,13,0	1/1:5,0:5:9.03:130,9,0	0/0:57,0:6:18.06:0,18,425	0/0:59,0:8:17.72:0,18,279	0/1:10,0:10:0:0,0,0	1/1:13,0:13:6.02:97,6,0	1/1:10,0:10:6.80:113,7,0	1/1:7,0:6:18.06:353,18,0	1/1:18,0:18:6.02:100,6,0	1/1:4,4:5:14.72:248,15,0	./.	1/1:3,2:5:3.90:39,4,0	1/1:3,2:4:6.02:74,6,0	0/1:1,5:5:0:0,0,0	1/1:14,0:13:3.92:50,4,0	1/1:4,2:6:9.03:118,9,0	0/0:3,0:3:0.47:0,0,1	1/1:3,0:4:11.78:188,12,0	1/1:5,0:5:9.03:146,9,0	1/1:13,0:13:3.01:53,3,0	./.	1/1:6,6:10:6.44:100,6,0	./.	0/1:4,0:4:0.17:0,0,0	1/1:8,2:9:18.06:257,18,0	1/1:17,0:16:45.15:781,45,0	1/1:15,0:15:36.12:612,36,0	1/1:2,0:2:6.02:116,6,0
chr10	90792688	.	GAAC	G	1222.64	PASS	AB=0.972;AC=38;AF=0.731;AN=52;BaseQRankSum=2.032;DP=349;FS=5.217;HRun=0;HaplotypeScore=138.8638;InbreedingCoeff=0.4122;MQ=33.77;MQ0=30;MQRankSum=2.317;QD=5.88;ReadPosRankSum=4.131;VQSLOD=2.1588;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,3:11:4.42:34,4,0	1/1:4,1:5:8.97:73,9,0	0/0:57,0:6:18.06:0,18,399	0/0:59,0:8:17.38:0,17,277	0/1:10,0:10:0:0,0,1	1/1:13,0:13:5.95:41,6,0	1/1:10,0:10:5.16:37,5,0	1/1:7,0:6:17.90:133,18,0	1/1:18,0:18:5.98:47,6,0	1/1:7,1:5:4.22:65,4,0	./.	0/0:6,0:5:1.56:0,2,6	0/1:4,1:4:2.44:20,0,2	0/1:6,0:5:0:0,0,0	1/1:12,2:13:3.01:31,3,0	0/0:6,0:6:4.73:0,5,14	0/1:3,0:3:0:0,0,0	0/1:4,0:4:9.49:20,0,9	1/1:6,0:5:8:49,8,0	1/1:13,0:13:2.94:24,3,0	1/1:14,0:12:1.25:3,1,0	1/1:7,5:10:4.99:60,5,0	./.	0/1:4,0:4:0.11:0,0,0	1/1:6,5:9:9.65:85,10,0	1/1:16,1:16:44.75:339,45,0	1/1:15,0:15:35.51:248,36,0	1/1:2,0:2:5.97:45,6,0
chr10	90793882	.	A	AAAGTCAGGCGT	45626.69	PASS	AB=0.590;AC=31;AF=0.554;AN=56;BaseQRankSum=7.454;DP=722;FS=8.764;HRun=0;HaplotypeScore=224.5575;InbreedingCoeff=0.9316;MQ=78.06;MQ0=0;MQRankSum=-19.545;QD=105.13;ReadPosRankSum=0.985;VQSLOD=3.9716;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,4212	1/1:2,11:14:39.13:2233,39,0	0/0:21,0:21:59.30:0,59,1618	0/0:38,0:38:99:0,101,2853	1/1:4,18:33:54.19:2744,54,0	1/1:4,15:26:51.17:2869,51,0	1/1:10,20:38:84.29:4722,84,0	1/1:15,8:34:90.29:3855,90,0	1/1:10,22:39:93.32:5060,93,0	0/0:21,0:21:63.20:0,63,1908	0/0:19,0:19:57.20:0,57,1907	0/0:20,0:20:60.19:0,60,1979	0/0:15,0:15:45.15:0,45,1483	0/0:14,0:14:36.12:0,36,1280	1/1:10,21:43:87.30:4322,87,0	0/0:38,0:37:99:0,114,3736	1/1:7,6:23:30.10:1532,30,0	0/0:21,0:21:34.10:0,34,1754	1/1:7,5:15:36.04:1385,36,0	1/1:6,20:35:72.25:3911,72,0	1/1:8,7:24:27.09:1348,27,0	0/0:29,0:29:81.25:0,81,2575	1/1:7,7:20:24.08:1293,24,0	1/1:5,10:18:27.04:1517,27,0	0/0:9,0:9:27.07:0,27,812	0/1:11,14:36:10.97:4055,0,11	1/1:5,18:28:66.23:3574,66,0	1/1:1,7:8:21.07:1207,21,0
chr10	90795225	.	C	CTG	17195.75	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-3.509;DP=720;FS=2.098;HRun=0;HaplotypeScore=99.6901;InbreedingCoeff=0.9892;MQ=76.53;MQ0=0;MQRankSum=-3.098;QD=40.75;ReadPosRankSum=0.588;VQSLOD=6.6637;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:72.23:0,72,972	1/1:3,11:14:30.10:530,30,0	0/0:14,0:14:35.88:0,36,404	0/0:17,0:17:36.03:0,36,453	1/1:2,27:29:54.18:954,54,0	1/1:4,22:26:60.21:1063,60,0	1/1:0,23:23:60.21:1064,60,0	1/1:4,34:39:99:1754,105,0	1/1:5,24:29:72.19:1274,72,0	0/0:33,0:33:93.28:0,93,1220	0/0:25,0:25:63.17:0,63,843	0/0:23,0:23:66.22:0,66,906	0/0:36,0:36:96.27:0,96,1267	0/0:14,0:14:42.14:0,42,576	1/1:1,31:32:72.25:1276,72,0	0/0:28,0:28:75.19:0,75,977	1/1:1,26:27:69.24:1223,69,0	0/0:27,0:27:81.27:0,81,1112	1/1:3,10:14:30.07:500,30,0	1/1:4,34:38:81.28:1435,81,0	1/1:4,25:30:63.22:1111,63,0	0/0:30,0:30:84.28:0,84,1149	1/1:0,17:17:30.10:530,30,0	1/1:1,11:12:24.08:426,24,0	0/0:24,0:24:63.20:0,63,848	1/1:4,28:32:7.84:1348,8,0	1/1:3,39:43:99:1963,111,0	1/1:0,16:17:42.14:744,42,0
chr10	90795492	.	TA	T	6931.47	PASS	AB=0.900;AC=33;AF=0.589;AN=56;BaseQRankSum=11.355;DP=438;FS=4.477;HRun=5;HaplotypeScore=77.7497;InbreedingCoeff=0.8934;MQ=72.83;MQ0=0;MQRankSum=-11.758;QD=28.52;ReadPosRankSum=0.746;VQSLOD=5.1960;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1558	1/1:0,11:11:30.09:339,30,0	0/0:15,0:15:33.70:0,34,386	0/0:7,0:5:6.10:0,6,57	1/1:1,12:12:36.07:395,36,0	1/1:0,10:10:30.09:340,30,0	1/1:0,14:14:36.02:379,36,0	1/1:2,16:18:48.14:544,48,0	1/1:1,15:16:45.13:510,45,0	0/0:25,0:25:66.21:0,66,890	0/0:20,0:20:54.18:0,54,738	0/0:15,0:15:42.14:0,42,575	0/0:9,0:9:18.06:0,18,246	0/0:11,0:11:30.10:0,30,410	1/1:2,15:17:42.12:475,42,0	0/1:8,1:9:9.89:10,0,263	1/1:3,15:18:4.06:420,4,0	0/0:19,0:19:48.16:0,48,650	1/1:2,24:26:72.18:797,72,0	1/1:2,15:17:45.13:510,45,0	1/1:0,16:16:39.01:411,39,0	0/0:13,0:13:36.12:0,36,493	1/1:0,8:8:24.07:272,24,0	1/1:0,9:9:21.06:238,21,0	0/0:22,0:22:66.22:0,66,902	1/1:1,11:12:33.09:374,33,0	1/1:1,23:24:66.19:748,66,0	1/1:0,5:5:15.04:170,15,0
chr10	90795520	.	GT	G	1149.23	PASS	AB=0.822;AC=20;AF=0.357;AN=56;BaseQRankSum=2.397;DP=357;FS=4.475;HRun=14;HaplotypeScore=66.7587;InbreedingCoeff=0.3074;MQ=62.65;MQ0=4;MQRankSum=-1.777;QD=6.28;ReadPosRankSum=1.256;VQSLOD=2.6471;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,4:48:39.12:0,39,829	0/0:10,0:10:0.47:0,0,1	0/1:22,0:10:12.34:12,0,24	0/1:10,0:6:6.26:6,0,25	0/0:8,0:8:0:0,0,0	0/0:9,0:9:0:0,0,0	0/0:8,0:8:0:0,0,0	0/0:8,0:8:0:0,0,0	0/0:11,0:11:0:0,0,0	0/1:8,10:18:20.58:144,0,21	1/1:6,11:17:4.83:177,5,0	1/1:7,10:19:9.90:173,10,0	1/1:5,5:10:11.74:76,12,0	1/1:5,4:10:10.92:67,11,0	0/0:7,0:7:0.47:0,0,1	1/1:3,9:11:20.78:144,21,0	1/1:14,1:15:2.83:20,3,0	1/1:3,11:18:31.93:188,32,0	0/0:9,0:9:0:0,0,0	0/0:9,0:9:0:0,0,0	0/0:10,0:10:0:0,0,0	0/1:5,5:11:2.98:110,0,3	0/0:8,0:7:0:0,0,0	0/0:6,0:6:0:0,0,0	1/1:11,7:21:23.86:141,24,0	0/0:6,0:6:0:0,0,0	0/0:13,0:13:0:0,0,0	0/0:3,0:3:0:0,0,0
chr10	90795786	.	AATAC	A	2211.25	PASS	AB=1.000;AC=19;AF=0.380;AN=50;BaseQRankSum=-1.879;DP=486;FS=3.499;HRun=0;HaplotypeScore=114.6641;InbreedingCoeff=0.8085;MQ=61.74;MQ0=6;MQRankSum=5.465;QD=15.04;ReadPosRankSum=0.910;VQSLOD=3.1573;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,1:46:10.39:0,10,1222	0/0:10,0:10:12.03:0,12,174	./.	./.	0/1:23,0:23:0.01:0,0,0	./.	0/0:18,0:18:5.38:0,5,48	0/0:34,0:32:30.07:0,30,351	0/0:14,0:14:6:0,6,75	1/1:2,13:15:39.13:606,39,0	1/1:5,7:12:15.05:236,15,0	1/1:4,8:12:21.07:330,21,0	1/1:5,12:16:21.07:330,21,0	1/1:8,11:17:15.05:236,15,0	0/0:9,0:9:6.02:0,6,99	1/1:4,9:12:9.03:141,9,0	0/0:22,0:22:6.02:0,6,89	1/1:9,5:14:8.99:141,9,0	0/0:19,0:17:24.02:0,24,366	0/0:30,0:30:8.97:0,9,71	0/0:21,0:21:18.01:0,18,256	1/1:2,3:5:9.03:141,9,0	0/0:18,0:17:18:0,18,210	0/0:17,0:16:5.87:0,6,70	1/1:9,8:17:15.05:236,15,0	0/0:14,0:14:15.05:0,15,268	0/0:20,0:20:16.83:0,17,178	0/0:8,0:8:7.57:0,8,69
chr10	90795808	.	T	TAC	341.67	PASS	AB=0.858;AC=7;AF=0.125;AN=56;BaseQRankSum=6.968;DP=441;FS=0.962;HRun=0;HaplotypeScore=94.4441;InbreedingCoeff=-0.0348;MQ=47.29;MQ0=12;MQRankSum=-5.163;QD=2.46;ReadPosRankSum=0.653;VQSLOD=2.0380;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:35:93.25:0,93,1280	0/0:7,0:7:14.06:0,14,158	0/0:17,0:6:12.87:0,13,128	0/0:23,0:8:18.01:0,18,221	0/1:11,9:20:0.01:0,0,0	0/0:7,4:11:8.99:0,9,110	0/0:14,2:16:10.47:0,10,179	0/1:43,0:36:99:121,0,774	0/0:10,0:10:12.91:0,13,149	0/0:18,0:18:53.76:0,54,452	0/0:9,0:9:23.91:0,24,232	0/0:12,0:12:32.87:0,33,317	0/0:15,0:14:26.85:0,27,231	0/0:16,0:14:26.91:0,27,258	0/1:9,0:9:1.58:2,0,51	0/0:11,0:10:14.95:0,15,148	0/0:16,0:15:21.07:0,21,291	0/0:10,0:10:23.91:0,24,250	0/1:20,1:18:44.08:44,0,321	0/1:24,0:23:67.28:67,0,272	0/0:18,0:18:13.92:0,14,266	0/0:5,0:5:14.95:0,15,147	0/0:13,1:13:4.54:0,5,147	0/0:9,0:8:9.03:0,9,119	0/0:21,0:21:53.98:0,54,622	0/0:9,0:9:20.96:0,21,247	0/1:11,5:16:99:106,0,180	0/1:2,4:6:11.91:118,0,12
chr10	90795824	.	T	TACACACACACACAC	6357.90	PASS	AC=26;AF=0.500;AN=52;BaseQRankSum=0.389;DP=413;FS=7.699;HRun=0;HaplotypeScore=147.4281;InbreedingCoeff=0.8313;MQ=54.84;MQ0=8;MQRankSum=-8.172;QD=33.82;ReadPosRankSum=-2.734;VQSLOD=2.9846;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:78.25:0,78,2666	1/1:3,1:6:6.02:389,6,0	0/0:18,0:9:14.83:0,15,210	0/0:24,0:5:9.03:0,9,267	0/0:16,0:16:0.49:0,0,1	./.	1/1:12,0:12:10.51:107,11,0	1/1:41,0:34:74.92:1407,75,0	1/1:1,0:9:3.01:157,3,0	0/0:18,0:18:52.73:0,53,1694	0/0:7,0:7:18.06:0,18,568	0/0:11,0:11:30.10:0,30,970	0/0:16,0:15:33.09:0,33,969	0/0:14,0:12:24.08:0,24,690	1/1:1,5:8:6.02:403,6,0	0/0:10,0:9:12.04:0,12,431	1/1:5,6:17:2.96:19,3,0	0/0:15,0:15:39.08:0,39,1050	1/1:21,0:20:38.79:960,39,0	1/1:4,0:17:8.24:394,8,0	1/1:13,0:13:8.89:300,9,0	0/0:4,0:4:12.04:0,12,413	1/1:14,0:13:12.04:460,12,0	./.	0/0:23,0:23:57.18:0,57,1782	1/1:8,0:8:18.05:685,18,0	1/1:16,0:16:24.06:781,24,0	1/1:4,0:4:9.03:298,9,0
chr10	90796002	.	GT	G	2762.65	PASS	AC=30;AF=0.556;AN=54;BaseQRankSum=13.693;DP=343;FS=2.061;HRun=1;HaplotypeScore=82.0561;InbreedingCoeff=0.9556;MQ=72.01;MQ0=1;MQRankSum=-12.524;QD=18.79;ReadPosRankSum=-0.287;VQSLOD=3.7645;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1652	1/1:0,4:4:12.03:124,12,0	0/0:11,0:11:27.09:0,27,403	0/0:17,0:15:36.09:0,36,529	1/1:3,4:7:12.02:119,12,0	1/1:1,5:6:14.44:137,14,0	1/1:3,6:7:18:169,18,0	1/1:6,14:20:57.38:518,57,0	1/1:3,7:10:19.32:217,19,0	0/0:16,0:16:48.16:0,48,760	0/0:18,0:18:51.17:0,51,807	0/0:11,0:11:33.11:0,33,526	0/0:9,0:9:27.08:0,27,408	0/0:16,0:16:48.15:0,48,743	1/1:3,5:8:15.02:143,15,0	0/0:11,0:11:33.11:0,33,524	1/1:3,14:17:43.13:419,43,0	0/0:22,0:22:66.15:0,66,1000	1/1:5,6:11:21.47:202,21,0	1/1:1,11:11:24:233,24,0	1/1:5,10:15:18.51:185,19,0	0/0:11,0:11:27.09:0,27,429	1/1:2,2:4:9.02:90,9,0	1/1:3,8:11:17.95:166,18,0	0/0:19,0:19:57.19:0,57,910	1/1:3,6:9:21.02:202,21,0	1/1:2,2:4:5.58:61,6,0	./.
chr10	90796190	.	ACG	A	5065.54	PASS	AB=0.515;AC=31;AF=0.554;AN=56;BaseQRankSum=16.826;DP=462;FS=6.938;HRun=0;HaplotypeScore=103.7949;InbreedingCoeff=0.9252;MQ=93.90;MQ0=1;MQRankSum=-16.618;QD=25.58;ReadPosRankSum=-0.079;VQSLOD=5.1976;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.24:0,75,1482	1/1:1,10:11:33.02:317,33,0	0/0:22,0:22:66.23:0,66,1278	0/0:28,0:28:75.07:0,75,1353	1/1:0,25:25:53.99:508,54,0	1/1:0,9:9:24.05:239,24,0	1/1:3,8:11:30.04:287,30,0	1/1:2,18:20:37.83:390,38,0	1/1:1,8:9:24.04:238,24,0	0/0:27,0:27:81.28:0,81,1628	0/0:23,0:23:69.22:0,69,1343	0/0:19,0:19:57.20:0,57,1121	0/0:12,0:12:36.11:0,36,676	0/0:22,0:22:66.17:0,66,1274	1/1:1,18:18:54.06:524,54,0	0/0:25,2:27:20.58:0,21,1458	1/1:1,7:8:24.03:231,24,0	0/0:16,0:16:48.12:0,48,928	1/1:0,11:11:33.09:358,33,0	1/1:1,6:7:21.03:203,21,0	1/1:4,3:7:14.98:132,15,0	0/0:24,0:24:69.24:0,69,1378	1/1:0,17:17:48.08:469,48,0	1/1:1,6:7:18.02:170,18,0	0/0:19,0:19:51.17:0,51,1009	0/1:1,16:17:12.81:414,0,13	1/1:0,13:13:39.08:394,39,0	1/1:2,5:7:20.98:191,21,0
chr10	90796193	.	TGTA	T	5643.74	PASS	AB=0.515;AC=31;AF=0.554;AN=56;BaseQRankSum=17.394;DP=456;FS=8.545;HRun=0;HaplotypeScore=110.1580;InbreedingCoeff=0.9170;MQ=92.16;MQ0=1;MQRankSum=-17.207;QD=29.39;ReadPosRankSum=-0.255;VQSLOD=4.8093;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.24:0,78,1769	1/1:1,10:11:33.05:354,33,0	0/0:22,0:22:66.21:0,66,1468	0/0:25,0:25:69.19:0,69,1483	1/1:2,23:25:57.06:610,57,0	1/1:0,9:9:24.07:271,24,0	1/1:1,8:9:26.99:287,27,0	1/1:2,18:20:39.50:448,40,0	1/1:0,8:8:24.07:269,24,0	0/0:28,0:28:84.29:0,84,1969	0/0:22,0:22:66.23:0,66,1548	0/0:21,0:21:63.22:0,63,1465	0/0:11,0:11:30.10:0,30,683	0/0:22,0:22:66.23:0,66,1551	1/1:1,18:18:54.13:596,54,0	0/0:26,2:28:15.44:0,15,1742	1/1:0,7:7:21.06:236,21,0	0/0:15,0:15:45.15:0,45,1064	1/1:0,11:11:33.10:403,33,0	1/1:1,6:7:20.85:217,21,0	1/1:1,3:4:11.95:109,12,0	0/0:24,0:24:69.24:0,69,1618	1/1:1,17:18:51.06:552,51,0	1/1:0,6:6:15.04:166,15,0	0/0:20,0:20:54.19:0,54,1277	0/1:1,16:17:23.10:461,0,23	1/1:1,13:14:41.99:461,42,0	1/1:2,5:7:20.99:206,21,0
chr10	90796406	.	CT	C	8380.81	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=15.166;DP=671;FS=1.711;HRun=9;HaplotypeScore=89.7363;InbreedingCoeff=0.9996;MQ=78.80;MQ0=0;MQRankSum=-4.439;QD=22.47;ReadPosRankSum=1.020;VQSLOD=5.3962;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1523	1/1:2,8:10:24.01:220,24,0	0/0:21,0:21:45.07:0,45,478	0/0:21,0:21:38.86:0,39,400	1/1:1,19:20:48.01:438,48,0	1/1:1,22:23:57.03:522,57,0	1/1:3,23:26:63.03:577,63,0	1/1:8,25:33:72.01:659,72,0	1/1:2,29:31:81.04:741,81,0	0/0:29,0:29:75.21:0,75,848	0/0:21,0:21:63.15:0,63,699	0/0:24,0:24:63.19:0,63,727	0/0:18,0:18:48.14:0,48,553	0/0:23,0:23:66.20:0,66,762	1/1:3,24:27:66.03:604,66,0	0/0:23,0:23:69.21:0,69,796	1/1:1,25:26:65.99:596,66,0	0/0:22,1:24:32.55:0,33,610	1/1:4,28:32:83.98:756,84,0	1/1:0,23:22:63.03:576,63,0	1/1:1,26:27:63.03:576,63,0	0/0:24,0:24:65.41:0,65,734	1/1:0,13:13:36.01:330,36,0	1/1:2,19:21:54.03:494,54,0	0/0:25,0:25:75.14:0,75,833	1/1:5,18:23:53.73:470,54,0	1/1:1,24:25:57.03:522,57,0	1/1:2,11:13:33.01:302,33,0
chr10	90800609	.	AT	A	7731.49	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=12.925;DP=515;FS=1.588;HRun=6;HaplotypeScore=56.6184;InbreedingCoeff=0.9829;MQ=68.72;MQ0=0;MQRankSum=-3.113;QD=24.31;ReadPosRankSum=0.612;VQSLOD=4.3769;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.16:0,66,821	1/1:2,8:10:24.06:258,24,0	0/0:13,0:9:20.68:0,21,219	0/0:8,0:7:9.02:0,9,93	1/1:2,22:24:57.07:587,57,0	1/1:0,15:15:42.11:451,42,0	1/1:1,7:8:12.03:129,12,0	1/1:6,22:28:66.07:663,66,0	1/1:6,21:27:54.13:580,54,0	0/0:18,0:18:51.15:0,51,637	0/0:19,0:19:54.14:0,54,668	0/0:17,0:17:48.12:0,48,587	0/0:17,0:17:48.13:0,48,600	0/0:25,0:25:72.18:0,72,889	1/1:4,20:24:51.13:545,51,0	0/0:18,1:19:18.89:0,19,556	1/1:0,21:21:51.13:546,51,0	0/0:15,0:15:42.11:0,42,523	1/1:4,14:18:42.06:428,42,0	1/1:2,17:19:47.95:474,48,0	1/1:1,20:21:48.12:515,48,0	0/0:6,0:6:15.02:0,15,168	1/1:2,15:17:32.92:342,33,0	1/1:1,8:9:21.05:226,21,0	0/0:18,0:18:54.17:0,54,697	1/1:3,26:29:41.74:798,42,0	1/1:1,20:21:60.15:644,60,0	1/1:5,22:26:51.13:547,51,0
chr10	90801599	.	CTTGTTTGTTTAT	C	6188.64	PASS	AB=1.000;AC=32;AF=0.593;AN=54;BaseQRankSum=-4.812;DP=354;FS=10.568;HRun=0;HaplotypeScore=142.2427;InbreedingCoeff=0.1609;MQ=53.64;MQ0=9;MQRankSum=-3.147;QD=24.27;ReadPosRankSum=0.240;VQSLOD=3.5217;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.22:0,66,2046	./.	0/1:27,0:9:12.11:12,0,185	0/0:23,0:6:14.88:0,15,232	0/1:7,0:7:46.37:46,0,308	0/1:14,0:13:99:323,0,265	0/1:5,0:5:56.34:56,0,207	0/1:28,0:26:99:119,0,716	0/1:8,0:8:50.35:50,0,264	1/1:1,10:11:27.09:700,27,0	1/1:0,4:4:9.03:184,9,0	1/1:7,1:8:21.07:385,21,0	1/1:0,7:7:3.01:114,3,0	1/1:2,7:9:15.05:563,15,0	1/1:11,0:14:39.08:682,39,0	1/1:5,0:5:15.05:301,15,0	1/1:24,0:27:56.12:1206,56,0	1/1:9,2:11:30.03:598,30,0	0/1:24,0:23:99:138,0,651	0/1:8,0:8:9.49:9,0,280	0/0:13,0:13:36.02:0,36,515	1/1:2,0:2:6.02:99,6,0	0/1:12,0:12:27.97:28,0,428	0/0:7,0:7:20.95:0,21,233	1/1:9,0:9:27.09:539,27,0	0/1:15,0:15:36.98:37,0,499	0/0:16,0:16:1.63:0,2,667	0/0:17,0:17:45.08:0,45,567
chr10	90801606	.	GTTTA	G	2089.28	PASS	AC=40;AF=0.952;AN=42;BaseQRankSum=4.739;DP=296;FS=5.004;HRun=0;HaplotypeScore=93.5772;InbreedingCoeff=0.3215;MQ=52.55;MQ0=9;MQRankSum=-3.174;QD=10.71;ReadPosRankSum=0.591;VQSLOD=1.9856;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:33.03:0,33,561	./.	./.	./.	1/1:6,0:6:6.02:76,6,0	1/1:12,1:13:26.72:260,27,0	1/1:4,0:4:3.01:36,3,0	./.	1/1:4,0:4:3.01:36,3,0	1/1:10,0:9:15:151,15,0	1/1:4,0:4:3:28,3,0	1/1:7,0:7:3.01:36,3,0	1/1:7,0:7:3:28,3,0	1/1:7,0:7:15:136,15,0	1/1:10,0:10:9.01:84,9,0	1/1:5,0:5:2.04:6,2,0	1/1:22,0:24:18.04:185,18,0	1/1:11,0:11:14.96:138,15,0	1/1:16,1:16:15.03:204,15,0	1/1:7,1:8:8.85:73,9,0	./.	./.	1/1:6,2:8:6.02:81,6,0	./.	1/1:9,0:9:3.01:45,3,0	1/1:7,5:12:15.05:226,15,0	1/1:12,2:14:9.03:128,9,0	1/1:15,0:15:15.05:236,15,0
chr10	90801655	.	G	GTT	4006.17	PASS	AB=0.778;AC=30;AF=0.556;AN=54;BaseQRankSum=-3.441;DP=265;FS=1.258;HRun=11;HaplotypeScore=54.9340;InbreedingCoeff=0.7330;MQ=55.96;MQ0=4;MQRankSum=0.881;QD=25.85;ReadPosRankSum=-0.550;VQSLOD=3.2659;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:22:50.78:0,51,475	0/1:2,0:2:0:0,0,0	0/0:18,0:4:5.55:0,6,34	0/0:15,0:6:7.98:0,8,60	1/1:0,5:6:18.02:228,18,0	1/1:2,14:16:36.12:521,36,0	1/1:4,4:7:12.04:174,12,0	1/1:9,22:34:64.76:848,65,0	1/1:0,6:6:15.05:217,15,0	0/0:9,0:8:15.02:0,15,145	0/0:2,0:2:6.01:0,6,58	0/0:3,0:3:9.01:0,9,87	0/0:2,0:2:6.01:0,6,58	0/0:10,0:11:14.93:0,15,195	1/1:2,4:6:9.03:130,9,0	0/0:5,0:5:15.02:0,15,145	1/1:6,12:21:40.60:503,41,0	0/0:17,0:18:44.76:0,45,419	1/1:6,11:17:36.08:484,36,0	0/1:1,3:5:14.57:124,0,15	1/1:0,4:5:14.54:182,15,0	./.	1/1:1,1:4:6.01:72,6,0	1/1:0,1:1:3.01:43,3,0	0/0:3,0:3:9.01:0,9,87	1/1:7,6:11:18.06:261,18,0	1/1:3,5:8:12.04:174,12,0	1/1:0,1:1:3.01:43,3,0
chr10	90801828	.	TTTTA	T	5342.16	PASS	AC=26;AF=0.481;AN=54;BaseQRankSum=9.105;DP=269;FS=0.497;HRun=0;HaplotypeScore=48.7301;InbreedingCoeff=0.8490;MQ=69.22;MQ0=0;MQRankSum=-0.823;QD=38.99;ReadPosRankSum=-1.249;VQSLOD=4.4865;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.10:0,54,1203	0/0:2,0:2:6.02:0,6,152	0/0:5,0:4:7.49:0,7,96	0/0:13,0:9:16.30:0,16,106	1/1:1,10:11:27.02:431,27,0	1/1:1,17:18:45.15:781,45,0	1/1:1,4:5:9.03:156,9,0	1/1:3,33:36:93.24:1455,93,0	1/1:0,7:7:12.04:208,12,0	0/0:7,0:7:18.03:0,18,337	0/0:6,0:6:12.04:0,12,304	0/0:4,0:4:12.03:0,12,254	0/0:3,0:3:9.03:0,9,223	0/0:3,0:3:9.03:0,9,228	0/0:2,0:2:3.01:0,3,76	0/0:9,0:9:27.09:0,27,651	0/0:34,0:34:93.25:0,93,2181	0/0:16,0:16:45.09:0,45,993	1/1:1,14:15:42.12:676,42,0	1/1:1,7:8:18.06:312,18,0	1/1:1,6:7:12.04:208,12,0	./.	1/1:0,1:1:3.01:50,3,0	1/1:1,4:5:8.77:156,9,0	0/0:6,0:6:12.04:0,12,271	1/1:0,11:11:30.09:491,30,0	1/1:0,3:3:6.02:104,6,0	1/1:2,8:10:18.06:312,18,0
chr10	90801988	.	AGTT	A	4524.75	PASS	AB=0.950;AC=28;AF=0.500;AN=56;BaseQRankSum=7.945;DP=556;FS=14.424;HRun=0;HaplotypeScore=84.6251;InbreedingCoeff=0.7909;MQ=64.43;MQ0=7;MQRankSum=4.011;QD=14.18;ReadPosRankSum=0.102;VQSLOD=3.0951;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:39:57.26:0,57,1410	0/0:4,0:8:12:0,12,147	0/0:25,0:17:15.05:0,15,275	0/0:26,0:18:15.03:0,15,217	1/1:12,5:17:9.03:122,9,0	1/1:9,11:20:30.10:408,30,0	1/1:7,9:16:21.07:285,21,0	1/1:32,11:43:33.06:390,33,0	1/1:9,5:15:12.04:163,12,0	0/0:13,0:13:21.06:0,21,343	0/0:7,0:7:15.05:0,15,275	0/0:16,0:16:30.09:0,30,555	0/1:19,1:20:4.66:5,0,564	0/1:17,1:18:10.67:11,0,467	0/0:6,0:10:17.97:0,18,197	0/0:17,1:18:1.42:0,1,671	0/0:12,0:23:34.32:0,34,403	0/0:31,2:33:22.39:0,22,1066	1/1:8,1:8:3.01:41,3,0	1/1:8,9:17:17.19:243,17,0	1/1:25,24:49:51.17:693,51,0	0/0:9,0:9:24.07:0,24,438	1/1:5,4:9:9.03:122,9,0	1/1:6,24:30:69.23:938,69,0	0/0:8,0:8:21.05:0,21,376	1/1:13,10:23:33.09:432,33,0	1/1:8,10:18:26.88:366,27,0	1/1:4,10:14:24.05:306,24,0
chr10	90802213	.	G	GT	13152.92	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-18.356;DP=667;FS=4.659;HRun=1;HaplotypeScore=54.9893;InbreedingCoeff=0.9978;MQ=77.84;MQ0=0;MQRankSum=0.886;QD=41.36;ReadPosRankSum=0.226;VQSLOD=5.1502;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.26:0,87,1113	0/0:14,0:14:42.14:0,42,545	0/0:17,0:17:48.15:0,48,618	0/0:11,0:11:26.94:0,27,319	1/1:1,39:40:99:1728,117,0	1/1:0,19:19:51.17:764,51,0	1/1:0,22:22:63.21:944,63,0	1/1:0,25:25:72.24:1080,72,0	1/1:0,22:22:57.19:854,57,0	0/0:32,0:32:96.30:0,96,1223	0/0:25,0:25:75.24:0,75,973	0/0:25,0:25:72.23:0,72,935	0/0:23,0:23:66.20:0,66,843	0/0:15,0:15:42.14:0,42,541	0/0:30,0:30:90.26:0,90,1139	0/0:32,0:32:93.30:0,93,1207	0/0:19,0:19:57.19:0,57,740	0/0:21,0:21:63.20:0,63,818	1/1:2,16:18:48.15:692,48,0	1/1:0,34:34:99:1434,99,0	1/1:0,15:15:45.15:675,45,0	0/0:28,0:28:84.27:0,84,1091	1/1:0,25:25:72.24:1079,72,0	1/1:0,20:20:54.18:809,54,0	0/0:28,0:28:81.24:0,81,1036	1/1:3,29:32:15.36:1204,15,0	1/1:0,30:30:81.27:1214,81,0	1/1:0,16:16:45.15:674,45,0
chr10	90803697	.	GA	G	169.62	PASS	AC=12;AF=0.240;AN=50;BaseQRankSum=3.656;DP=477;FS=25.745;HRun=1;HaplotypeScore=51.6905;InbreedingCoeff=0.7874;MQ=100.86;MQ0=0;MQRankSum=-4.685;QD=15.42;ReadPosRankSum=-3.092;VQSLOD=1.3407;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1821	0/0:13,0:13:39.10:0,39,591	0/0:30,0:30:87.27:0,87,1341	0/0:27,0:26:71.67:0,72,1032	0/0:21,0:21:63.21:0,63,993	0/0:19,0:19:57.15:0,57,883	0/0:18,0:18:54.17:0,54,831	0/0:32,0:32:96.32:0,96,1491	0/0:21,0:21:63.20:0,63,984	1/1:1,1:2:6.02:76,6,0	./.	1/1:0,1:1:3.01:42,3,0	1/1:0,2:2:3.01:42,3,0	1/1:0,3:3:6.02:84,6,0	0/0:33,0:33:99:0,99,1549	1/1:0,2:2:3.01:42,3,0	0/0:22,0:22:66.22:0,66,1052	./.	0/0:23,0:23:69.22:0,69,1070	0/0:14,0:14:42.14:0,42,669	0/0:37,0:37:99:0,105,1624	1/1:0,1:1:3:26,3,0	0/0:21,0:21:63.20:0,63,978	0/0:34,0:34:99:0,102,1630	./.	0/0:27,0:27:75.26:0,75,1199	0/0:24,0:24:72.23:0,72,1118	0/0:10,0:10:30.10:0,30,480
chr10	90803988	.	G	GC	2640.82	PASS	AC=6;AF=0.158;AN=38;BaseQRankSum=-12.615;DP=521;FS=1.600;HRun=3;HaplotypeScore=73.5310;InbreedingCoeff=0.9925;MQ=92.22;MQ0=0;MQRankSum=-1.720;QD=35.21;ReadPosRankSum=2.261;VQSLOD=4.3974;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,156,1858	1/1:1,10:11:21.07:294,21,0	0/0:19,0:20:52.97:0,53,599	0/0:23,0:23:60.16:0,60,680	0/0:35,0:35:99:0,105,1259	0/0:21,0:21:60.18:0,60,720	0/0:23,0:23:66.20:0,66,792	0/0:35,0:35:93.27:0,93,1106	0/0:24,0:24:66.20:0,66,792	./.	./.	./.	./.	./.	1/1:3,28:31:84.28:1176,84,0	./.	1/1:0,33:33:93.31:1302,93,0	./.	0/0:21,0:21:57.17:0,57,684	0/0:23,0:23:66.18:0,66,775	0/0:48,0:48:99:0,138,1629	./.	0/0:28,0:28:78.24:0,78,936	0/0:48,0:48:99:0,135,1591	./.	0/0:26,0:26:78.24:0,78,936	0/0:13,0:12:39.10:0,39,455	0/0:5,0:5:15.05:0,15,180
chr10	90804536	.	AGCATGCGCGTGC	A	4430.88	PASS	AB=0.560;AC=23;AF=0.411;AN=56;BaseQRankSum=7.474;DP=628;FS=0.000;HRun=0;HaplotypeScore=257.1047;InbreedingCoeff=0.8003;MQ=61.34;MQ0=1;MQRankSum=-4.377;QD=14.92;ReadPosRankSum=-2.623;VQSLOD=3.2702;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,5405	0/0:10,0:10:12.04:0,12,608	0/0:24,0:17:29.22:0,29,328	0/0:16,0:12:19.58:0,20,259	1/1:9,5:14:5.74:62,6,0	0/1:5,21:26:0:0,0,0	1/1:0,31:31:9.03:269,9,0	1/1:10,20:30:44.64:891,45,0	1/1:16,7:23:12.15:289,12,0	0/0:36,0:36:99:0,102,4872	0/0:11,0:11:6.02:0,6,257	0/0:27,0:27:8.53:0,9,553	0/0:15,0:15:14.81:0,15,597	0/0:31,0:31:27.08:0,27,1249	0/0:22,0:22:36.11:0,36,1222	0/0:15,0:15:15.05:0,15,598	0/0:25,0:25:42.96:0,43,1671	0/0:24,0:24:57.16:0,57,2459	1/1:9,17:25:28.77:703,29,0	1/1:10,11:21:5.98:128,6,0	0/1:10,36:45:0:0,0,0	0/0:13,0:13:9.03:0,9,554	0/1:4,13:17:0:0,0,0	1/1:2,23:25:3.32:107,3,0	0/0:23,0:23:27.09:0,27,1122	1/1:2,19:21:42.39:1427,42,0	1/1:5,7:12:9.92:230,10,0	1/1:0,5:5:9.03:325,9,0
chr10	90804567	.	ACACGCACACACG	A	183.82	PASS	AB=1.000;AC=6;AF=0.111;AN=54;BaseQRankSum=1.239;DP=550;FS=6.742;HRun=0;HaplotypeScore=273.2383;InbreedingCoeff=0.4426;MQ=49.31;MQ0=6;MQRankSum=-2.712;QD=2.66;ReadPosRankSum=-0.527;VQSLOD=1.4290;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.31:0,96,4253	./.	0/1:17,0:6:0.23:0,0,14	0/0:15,0:6:0.89:0,1,2	0/0:11,0:11:0:0,0,0	0/0:22,0:22:2.94:0,3,44	0/0:29,0:29:8.74:0,9,126	0/0:24,0:23:59.94:0,60,973	0/0:11,0:11:2.94:0,3,35	0/0:26,0:26:73.43:0,73,2093	0/0:7,0:7:3.01:0,3,50	0/0:25,0:25:12.46:0,12,276	0/0:16,0:16:12.04:0,12,110	0/0:24,0:24:15.02:0,15,378	1/1:5,5:10:2.45:107,2,0	0/0:14,0:14:6.02:0,6,231	1/1:20,4:24:5.55:169,6,0	0/0:26,0:25:42.05:0,42,917	0/0:22,0:21:55.78:0,56,854	0/0:22,0:21:0.01:0,0,1	0/0:45,0:43:0.47:0,0,1	0/0:10,0:10:9.03:0,9,154	0/1:16,0:16:0:0,0,0	0/0:24,0:24:2.90:0,3,43	0/0:19,0:19:15.01:0,15,248	0/0:22,0:22:32.54:0,33,586	0/0:15,0:15:17.91:0,18,175	0/0:5,0:5:11.97:0,12,123
chr10	90804573	.	A	ATG	106.44	PASS	AB=1.000;AC=8;AF=0.160;AN=50;BaseQRankSum=1.005;DP=551;FS=3.503;HRun=0;HaplotypeScore=230.0022;InbreedingCoeff=0.4682;MQ=42.70;MQ0=7;MQRankSum=-1.454;QD=0.78;ReadPosRankSum=-1.163;VQSLOD=2.2890;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1630	./.	0/1:17,0:3:0.49:0,0,18	./.	./.	0/0:22,0:22:3.01:0,3,49	0/0:34,0:34:8.99:0,9,118	0/0:26,0:25:61.54:0,62,913	0/0:12,0:12:2.75:0,3,49	0/0:26,0:26:78.22:0,78,1237	0/0:7,0:7:3.01:0,3,49	0/0:22,0:22:12.51:0,13,197	0/0:17,0:17:12.01:0,12,148	0/0:23,0:23:15.05:0,15,237	1/1:7,3:10:2.67:14,3,0	0/0:13,0:13:6.02:0,6,98	1/1:14,7:21:15.21:189,15,0	0/0:26,0:25:42.09:0,42,624	0/0:23,0:22:56.05:0,56,814	0/1:23,0:22:0.35:1,0,0	0/1:49,0:47:0:0,0,0	0/0:9,0:9:9.03:0,9,147	0/1:17,0:17:0:0,0,0	0/0:25,0:25:2.02:0,2,48	0/0:20,0:20:15.05:0,15,236	0/0:23,0:22:56.93:0,57,689	0/0:16,0:16:18.04:0,18,248	0/0:5,0:5:12.04:0,12,195
chr10	90804581	.	ACGCACGCACGCGCG	A	456.17	PASS	AB=1.000;AC=17;AF=0.340;AN=50;BaseQRankSum=3.655;DP=537;FS=6.634;HRun=0;HaplotypeScore=259.7221;InbreedingCoeff=-0.0768;MQ=39.62;MQ0=9;MQRankSum=-6.370;QD=1.47;ReadPosRankSum=-0.574;VQSLOD=1.4498;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:87.30:0,87,4296	./.	0/0:13,0:2:2.22:0,2,7	0/0:10,0:2:2.22:0,2,7	./.	0/0:19,0:19:2.96:0,3,37	0/1:32,0:32:54.89:70,0,55	0/1:22,0:21:18.21:18,0,442	0/0:16,0:16:2.80:0,3,28	0/1:23,0:23:63.48:63,0,1398	./.	0/1:24,0:24:26.48:26,0,123	1/1:17,0:17:6.09:27,6,0	0/0:21,0:21:9.03:0,9,239	1/1:8,2:10:2.82:104,3,0	0/0:13,0:13:6.02:0,6,171	1/1:16,6:22:5.55:138,6,0	0/1:29,0:28:32.14:32,0,460	0/1:22,0:19:3.18:3,0,363	0/0:22,0:21:0.12:0,0,1	0/1:50,0:49:0.22:1,0,0	0/0:11,0:10:3.01:0,3,45	0/1:17,0:16:0:0,0,0	0/0:23,0:23:2.49:0,2,6	0/0:19,0:19:6.02:0,6,91	0/1:20,0:19:47.56:48,0,188	0/1:17,0:17:39.24:39,0,68	0/1:5,0:5:15.97:16,0,28
chr10	90807580	.	A	AACAC	10732.86	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-11.563;DP=450;FS=0.861;HRun=0;HaplotypeScore=83.5678;InbreedingCoeff=0.9157;MQ=81.19;MQ0=0;MQRankSum=-5.335;QD=48.79;ReadPosRankSum=1.832;VQSLOD=5.6678;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.20:0,66,1120	0/0:7,0:7:20.90:0,21,226	0/0:18,0:18:40:0,40,652	0/0:12,0:12:32.42:0,32,417	1/1:4,12:17:30.10:728,30,0	1/1:6,7:14:24.08:581,24,0	1/1:0,23:23:48.16:1203,48,0	1/1:6,15:23:60.17:1119,60,0	1/1:5,10:17:39.13:937,39,0	0/0:11,0:11:6.09:0,6,170	0/0:11,0:11:5.54:0,6,166	0/0:17,0:17:27.02:0,27,318	0/0:12,0:12:1.03:0,1,97	0/0:15,0:15:20.99:0,21,193	0/0:28,0:27:81.23:0,81,1006	0/0:15,0:15:16.30:0,16,227	0/0:21,0:21:51.11:0,51,619	0/0:19,0:19:8.95:0,9,67	1/1:5,5:10:27.04:553,27,0	1/1:8,21:30:45.62:1085,46,0	1/1:2,11:13:21.07:540,21,0	0/0:9,0:9:23.32:0,23,159	1/1:5,11:16:26.60:621,27,0	1/1:1,11:13:15.52:393,16,0	0/0:10,0:10:8.81:0,9,87	1/1:0,16:16:48.16:1184,48,0	1/1:1,10:13:27.09:695,27,0	1/1:0,15:15:42.14:1096,42,0
chr10	90807583	.	A	ACCC	4808.24	PASS	AB=0.895;AC=48;AF=0.857;AN=56;BaseQRankSum=5.155;DP=446;FS=1.314;HRun=9;HaplotypeScore=98.9306;InbreedingCoeff=0.5623;MQ=80.01;MQ0=0;MQRankSum=-5.095;QD=12.23;ReadPosRankSum=2.018;VQSLOD=1.8104;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:53.93:0,54,638	1/1:7,0:7:15.14:52,15,0	0/0:17,0:17:10.78:0,11,361	0/0:13,0:13:9.58:0,10,158	1/1:17,0:19:31:263,31,0	1/1:11,0:13:21.20:163,21,0	1/1:22,0:22:44.33:296,44,0	1/1:21,0:21:1.75:162,2,0	1/1:14,0:16:37.95:303,38,0	1/1:12,0:12:14.79:190,15,0	1/1:9,2:11:20.94:201,21,0	1/1:16,0:16:23.96:281,24,0	1/1:6,8:15:5.95:44,6,0	1/1:14,0:15:32.95:358,33,0	1/1:28,0:28:36.06:127,36,0	1/1:6,9:15:5.97:118,6,0	1/1:20,0:20:25.97:72,26,0	1/1:3,17:21:14.97:186,15,0	0/1:10,0:12:61.74:137,0,62	1/1:24,0:29:42.29:389,42,0	1/1:12,0:13:23.67:181,24,0	1/1:6,1:8:20.94:169,21,0	1/1:10,0:14:23.78:244,24,0	0/1:13,0:14:6.82:89,0,7	1/1:2,6:8:2.97:20,3,0	1/1:17,0:17:18.40:267,18,0	1/1:11,0:12:26.72:209,27,0	1/1:15,0:15:41.54:286,42,0
chr10	90807590	.	C	CCA	2170.65	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-6.883;DP=439;FS=30.473;HRun=0;HaplotypeScore=90.6651;InbreedingCoeff=0.2775;MQ=80.76;MQ0=0;MQRankSum=-0.425;QD=15.18;ReadPosRankSum=4.049;VQSLOD=1.8370;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.12:0,63,834	1/1:0,8:8:21.07:370,21,0	0/0:20,0:20:52.52:0,53,603	0/1:11,0:11:12.41:12,0,209	0/0:22,0:22:27.75:0,28,210	0/0:13,0:13:17.26:0,17,113	0/0:24,0:24:63.05:0,63,438	0/0:22,0:22:43.52:0,44,298	0/0:16,0:16:24.13:0,24,170	0/1:12,0:12:13.79:14,0,109	0/1:13,0:13:25.33:25,0,55	0/1:14,0:14:3.93:4,0,108	0/0:12,0:12:8.96:0,9,68	0/1:14,0:14:13.10:13,0,53	1/1:0,23:24:69.07:1175,69,0	0/0:13,0:13:2.87:0,3,47	1/1:0,16:17:39.13:687,39,0	0/1:21,0:21:7.23:7,0,51	0/0:11,0:11:21.26:0,21,184	0/0:25,0:25:16.75:0,17,145	0/0:12,0:12:24.72:0,25,182	0/1:9,0:9:18.60:28,0,19	0/0:12,0:12:3.79:0,4,35	0/0:11,0:11:17.62:0,18,137	0/0:10,0:10:8.49:0,8,74	0/0:19,0:18:46.74:0,47,323	0/0:13,0:13:23.63:0,24,131	0/0:17,0:17:48.65:0,49,293
chr10	90809509	.	C	CA	1348.54	PASS	AB=0.969;AC=16;AF=0.286;AN=56;BaseQRankSum=10.864;DP=576;FS=52.332;HRun=0;HaplotypeScore=158.6670;InbreedingCoeff=-0.2813;MQ=62.26;MQ0=14;MQRankSum=-8.823;QD=4.44;ReadPosRankSum=-4.155;VQSLOD=1.1635;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:38:99:0,103,1247	0/1:8,1:8:19.02:19,0,67	0/0:30,0:20:60.19:0,60,792	0/0:31,0:22:60.20:0,60,802	0/0:9,0:9:11.95:0,12,139	0/1:16,1:16:65.46:65,0,239	0/1:25,0:21:99:112,0,276	0/1:22,0:22:38.50:39,0,645	0/1:25,1:22:99:172,0,239	0/1:20,2:20:99:127,0,389	0/0:7,0:7:2.25:0,2,21	0/1:28,1:28:51.78:52,0,212	0/1:12,0:11:70.83:71,0,154	0/1:28,1:29:88.62:89,0,320	0/1:28,0:27:99:131,0,281	0/1:22,0:20:99:115,0,249	0/0:20,0:23:41.29:0,41,518	0/1:17,1:16:99:148,0,355	0/0:12,0:12:5.54:0,6,373	0/0:21,0:18:1.68:0,2,274	0/0:21,0:19:26.57:0,27,318	0/0:19,0:18:23.92:0,24,260	0/0:12,0:11:14.50:0,15,175	0/0:29,1:29:44.80:0,45,554	0/0:17,0:15:20.21:0,20,255	0/1:24,1:25:99:175,0,501	0/1:16,0:15:90.79:91,0,248	1/1:4,0:4:10.27:103,10,0
chr10	90811027	.	T	TGAGA	10516.35	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-8.054;DP=566;FS=2.364;HRun=0;HaplotypeScore=94.2927;InbreedingCoeff=0.8843;MQ=77.66;MQ0=3;MQRankSum=-3.718;QD=31.68;ReadPosRankSum=3.874;VQSLOD=4.4194;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1666	1/1:0,3:3:3.01:76,3,0	0/0:42,0:37:48.58:0,49,738	0/1:42,0:37:11.12:11,0,565	1/1:3,10:13:20.67:527,21,0	1/1:5,12:17:12.04:301,12,0	1/1:2,13:15:29.89:691,30,0	1/1:11,14:33:52.66:898,53,0	1/1:6,19:25:33.11:829,33,0	0/0:22,0:22:43.03:0,43,739	0/0:10,0:10:27.08:0,27,417	0/0:15,0:15:33.11:0,33,538	0/0:15,0:15:36.10:0,36,566	0/0:20,0:20:42.11:0,42,647	1/1:7,12:18:30.10:752,30,0	0/0:23,0:23:48.15:0,48,764	1/1:8,21:31:50.96:1220,51,0	0/0:23,0:23:54.18:0,54,903	1/1:8,9:18:29.66:511,30,0	1/1:3,8:11:6.02:151,6,0	1/1:12,25:38:50.92:1283,51,0	0/0:19,0:19:39.12:0,39,615	1/1:1,10:11:24.08:604,24,0	1/1:2,17:19:39.13:982,39,0	0/0:9,0:9:21.06:0,21,356	1/1:1,5:6:15.05:339,15,0	1/1:4,9:14:27.09:669,27,0	1/1:4,10:15:27.09:671,27,0
chr10	90811588	.	T	TCTAC	5857.79	PASS	AB=1.000;AC=33;AF=0.611;AN=54;BaseQRankSum=-6.284;DP=545;FS=8.675;HRun=0;HaplotypeScore=93.6283;InbreedingCoeff=0.8171;MQ=69.16;MQ0=1;MQRankSum=0.640;QD=18.36;ReadPosRankSum=-2.658;VQSLOD=2.9592;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:48.05:0,48,644	1/1:8,0:14:23.95:385,24,0	./.	0/0:26,0:22:2.97:0,3,20	1/1:4,8:13:21.03:443,21,0	1/1:11,6:19:18.06:423,18,0	1/1:12,3:16:9.03:211,9,0	1/1:36,0:36:12:140,12,0	1/1:11,8:21:21.07:493,21,0	0/0:22,0:22:30.10:0,30,447	0/0:13,0:13:15.04:0,15,208	0/0:22,0:22:30.09:0,30,442	0/0:11,0:20:24.50:0,24,224	0/0:17,0:17:24.08:0,24,371	1/1:17,0:30:20.81:356,21,0	0/0:20,0:20:33.10:0,33,490	1/1:11,1:15:3.01:65,3,0	0/1:19,0:19:31.89:32,0,383	1/1:16,9:25:24.08:490,24,0	1/1:2,7:9:18.06:423,18,0	1/1:17,13:31:24.08:564,24,0	0/0:17,0:17:15.03:0,15,205	1/1:6,2:9:6.02:141,6,0	1/1:10,11:23:30.10:704,30,0	0/0:17,0:17:18.06:0,18,279	1/1:8,8:16:21.07:493,21,0	1/1:11,7:17:12.04:282,12,0	1/1:1,3:5:9.03:212,9,0
chr10	90812107	.	TA	T	4739.93	PASS	AB=0.955;AC=28;AF=0.500;AN=56;BaseQRankSum=11.362;DP=545;FS=5.539;HRun=11;HaplotypeScore=56.2161;InbreedingCoeff=0.7936;MQ=73.68;MQ0=0;MQRankSum=-0.528;QD=16.29;ReadPosRankSum=2.143;VQSLOD=5.7561;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:29:59.52:0,60,808	0/1:9,1:10:0.59:1,0,192	0/1:17,0:15:18.75:19,0,208	0/0:11,0:11:8.90:0,9,93	1/1:2,10:13:22.97:178,23,0	1/1:2,24:26:59.93:493,60,0	1/1:3,14:17:32.95:271,33,0	1/1:4,27:31:80.86:660,81,0	1/1:4,16:20:12.92:313,13,0	0/0:20,1:21:26.45:0,26,466	0/0:12,0:12:21.48:0,21,206	0/0:16,0:16:39.06:0,39,392	0/0:20,0:20:54.11:0,54,565	0/0:18,1:19:17.34:0,17,367	0/0:20,2:22:35.22:0,35,548	0/0:20,2:22:1.83:0,2,417	0/0:28,0:27:50.71:0,51,657	0/0:20,0:20:52.30:0,52,517	1/1:5,11:16:4.24:234,4,0	1/1:3,7:10:12.05:118,12,0	1/1:3,13:16:38.95:320,39,0	0/0:18,0:17:45.11:0,45,474	1/1:2,12:14:29.96:246,30,0	1/1:2,27:29:71.91:591,72,0	0/0:15,1:16:14.42:0,14,342	1/1:5,20:25:1.65:410,2,0	1/1:4,22:26:59.86:492,60,0	1/1:2,19:21:47.93:394,48,0
chr10	90814047	.	CT	C	2354.86	PASS	AB=0.725;AC=24;AF=0.429;AN=56;BaseQRankSum=2.824;DP=444;FS=5.790;HRun=12;HaplotypeScore=70.6643;InbreedingCoeff=0.6577;MQ=61.48;MQ0=4;MQRankSum=1.596;QD=10.66;ReadPosRankSum=2.431;VQSLOD=3.2488;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:29:30.32:0,30,417	0/0:4,0:7:11.49:0,11,63	0/1:12,1:6:17.23:17,0,24	0/0:11,0:7:14.87:0,15,127	1/1:5,6:11:17.90:138,18,0	1/1:9,9:18:2.41:201,2,0	1/1:4,13:18:31.42:235,31,0	0/1:16,12:28:4.61:235,0,5	1/1:9,6:16:16.92:121,17,0	0/0:17,0:18:29.73:0,30,272	0/0:11,0:11:26.96:0,27,251	0/0:17,0:17:41.93:0,42,382	0/0:16,0:16:9.79:0,10,237	0/0:10,0:10:19.74:0,20,152	0/0:12,0:19:17.07:0,17,76	0/0:12,0:13:23.84:0,24,217	0/0:12,0:20:43.08:0,43,273	0/0:23,2:27:2.60:0,3,331	0/1:8,9:19:39.73:134,0,40	0/1:6,10:16:3.57:159,0,4	1/1:4,8:12:17.92:139,18,0	0/0:10,0:11:18.03:0,18,177	1/1:1,8:9:23.91:185,24,0	1/1:4,11:15:5.42:225,5,0	0/0:11,0:10:12.50:0,12,122	1/1:7,12:19:38.84:301,39,0	1/1:4,13:17:38.82:300,39,0	1/1:2,6:9:22.95:168,23,0
chr10	90814064	.	CT	C	374.45	PASS	AB=0.914;AC=9;AF=0.161;AN=56;BaseQRankSum=-0.780;DP=420;FS=17.015;HRun=11;HaplotypeScore=75.3698;InbreedingCoeff=0.5262;MQ=50.73;MQ0=9;MQRankSum=-3.574;QD=4.68;ReadPosRankSum=0.151;VQSLOD=0.3135;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:44.21:0,44,475	1/1:2,3:5:8.99:74,9,0	0/0:7,0:2:6.01:0,6,63	0/0:8,0:5:8.98:0,9,78	0/0:17,0:16:26.74:0,27,189	0/0:13,1:14:4.50:0,4,127	0/0:14,0:14:10.62:0,11,168	0/0:22,0:22:31.41:0,31,273	0/1:11,0:11:2.78:3,0,91	0/1:15,4:16:37.78:38,0,221	0/1:10,1:11:3.61:4,0,159	0/0:17,0:17:19.62:0,20,276	0/0:11,0:11:16.25:0,16,143	0/0:14,1:14:8.06:0,8,268	1/1:7,10:17:28.91:222,29,0	0/0:12,0:12:24.05:0,24,249	1/1:11,5:16:23.50:179,23,0	0/0:27,1:26:45.07:0,45,467	0/0:19,0:19:15.63:0,16,205	0/0:17,0:17:29.38:0,29,188	0/0:12,0:12:17.57:0,18,108	0/0:9,0:9:9.01:0,9,89	0/0:10,0:10:11.64:0,12,68	0/0:19,0:19:16.87:0,17,170	0/0:10,0:9:15.50:0,15,153	0/0:20,0:20:34.79:0,35,207	0/0:23,0:23:7.21:0,7,160	0/0:10,0:10:19.92:0,20,116
chr10	90814146	.	GC	G	6715.93	PASS	AB=0.519;AC=31;AF=0.554;AN=56;BaseQRankSum=8.333;DP=492;FS=4.429;HRun=7;HaplotypeScore=58.9773;InbreedingCoeff=0.9499;MQ=78.67;MQ0=16;MQRankSum=-2.063;QD=24.16;ReadPosRankSum=2.735;VQSLOD=5.4726;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:63.20:0,63,791	1/1:1,5:6:12.01:122,12,0	0/0:27,0:19:45.92:0,46,511	0/0:23,0:15:30.71:0,31,375	1/1:1,18:19:39.09:398,39,0	1/1:1,14:15:39.09:397,39,0	1/1:4,18:21:54.12:551,54,0	1/1:7,20:26:48.09:487,48,0	0/1:1,13:14:1.65:301,0,2	0/0:16,0:15:30.10:0,30,376	0/0:10,0:10:27.09:0,27,339	0/0:14,0:14:42.13:0,42,528	0/0:13,0:13:36.12:0,36,453	0/0:17,0:16:42.12:0,42,506	1/1:1,15:16:45.10:459,45,0	0/0:29,0:29:87.20:0,87,1051	1/1:2,28:29:75.17:765,75,0	0/0:21,0:21:57.17:0,57,705	1/1:1,11:12:33.07:337,33,0	1/1:1,16:17:36.08:367,36,0	1/1:2,9:10:24.05:245,24,0	0/0:8,0:8:24.08:0,24,302	1/1:0,18:18:48.11:490,48,0	1/1:2,15:17:42.09:428,42,0	0/0:11,0:11:30.10:0,30,377	1/1:2,17:19:16.31:482,16,0	1/1:3,23:25:60.13:612,60,0	1/1:0,9:9:27.06:275,27,0
chr10	90815485	.	A	AC	6857.73	PASS	AB=0.588;AC=25;AF=0.446;AN=56;BaseQRankSum=-12.173;DP=613;FS=0.693;HRun=7;HaplotypeScore=63.0954;InbreedingCoeff=0.9227;MQ=69.74;MQ0=1;MQRankSum=0.101;QD=24.85;ReadPosRankSum=-1.617;VQSLOD=4.4980;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:72.08:0,72,689	0/0:10,0:10:21.02:0,21,203	0/0:19,0:19:41:0,41,368	0/0:15,0:13:12.19:0,12,206	1/1:0,20:20:51.09:586,51,0	1/1:2,19:21:45.14:543,45,0	1/1:4,20:24:57.17:685,57,0	1/1:4,16:20:48.13:568,48,0	1/1:5,17:22:43.01:510,43,0	0/0:23,0:23:66.09:0,66,632	0/0:15,0:15:39.02:0,39,364	0/0:32,0:32:81.11:0,81,776	0/0:23,0:23:66.11:0,66,636	0/0:28,0:28:75.10:0,75,718	0/0:27,0:27:69.09:0,69,660	0/0:25,0:25:69.11:0,69,666	0/0:38,0:39:98.74:0,99,936	0/0:13,0:13:26.99:0,27,251	1/1:7,16:23:48.13:567,48,0	1/1:0,12:12:30.05:346,30,0	1/1:7,34:41:72.22:870,72,0	0/0:15,0:15:39.05:0,39,375	1/1:4,8:12:30.08:351,30,0	1/1:1,13:14:33.10:394,33,0	0/0:21,0:21:51.07:0,51,492	0/1:6,14:20:38.39:423,0,38	1/1:2,26:28:51.14:610,51,0	1/1:6,13:19:35.39:405,35,0
chr10	90816346	.	TAAA	T	7169.60	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=3.221;DP=566;FS=13.916;HRun=13;HaplotypeScore=106.0029;InbreedingCoeff=0.9983;MQ=73.46;MQ0=0;MQRankSum=-1.666;QD=25.33;ReadPosRankSum=3.846;VQSLOD=2.4124;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:32:81.25:0,81,1424	0/0:1,0:9:22.87:0,23,125	0/0:14,0:12:21.48:0,21,254	0/0:17,0:15:27.78:0,28,326	1/1:3,17:21:30.54:379,31,0	1/1:6,18:24:51.07:620,51,0	1/1:6,23:30:72.07:857,72,0	1/1:6,18:24:53.79:599,54,0	1/1:4,16:21:34.38:435,34,0	0/0:18,0:20:54.12:0,54,886	0/0:10,0:11:27.02:0,27,433	0/0:19,0:21:61.40:0,61,1057	0/0:14,0:15:42.10:0,42,677	0/0:23,0:23:60.21:0,60,1127	0/0:5,0:15:36.14:0,36,184	0/0:17,0:17:45.15:0,45,823	0/0:3,0:31:49.39:0,49,304	0/0:19,0:22:60.14:0,60,1035	1/1:2,17:19:48.08:566,48,0	1/1:4,16:20:42.07:511,42,0	1/1:4,22:26:34.71:467,35,0	0/0:15,0:16:45.12:0,45,757	1/1:3,14:17:23.81:292,24,0	1/1:2,17:20:42.07:511,42,0	0/0:17,0:19:48.10:0,48,831	1/1:3,19:22:57.15:693,57,0	1/1:1,26:27:75.22:912,75,0	1/1:2,10:12:27.02:328,27,0
chr10	90817685	.	C	CAAAT	4269.93	PASS	AB=0.750;AC=25;AF=0.521;AN=48;BaseQRankSum=4.143;DP=300;FS=23.923;HRun=0;HaplotypeScore=56.9518;InbreedingCoeff=0.7239;MQ=46.29;MQ0=13;MQRankSum=-6.581;QD=24.12;ReadPosRankSum=-1.637;VQSLOD=2.0707;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:39.09:0,39,586	1/1:0,1:1:3.01:73,3,0	0/0:4,0:2:6.02:0,6,76	0/0:8,0:3:7.75:0,8,65	1/1:7,3:9:6.02:146,6,0	1/1:9,7:18:24.08:515,24,0	./.	1/1:29,11:29:45.15:987,45,0	1/1:7,4:11:12.04:291,12,0	0/0:13,0:13:15.05:0,15,232	0/0:7,0:7:9.03:0,9,146	0/0:6,0:6:15.05:0,15,242	0/0:7,0:7:18.06:0,18,286	0/0:8,0:8:12.04:0,12,194	1/1:3,0:7:3.01:52,3,0	0/0:6,0:6:9.03:0,9,146	1/1:20,0:24:29.83:353,30,0	0/0:15,0:14:21.54:0,22,339	1/1:8,10:16:30.10:696,30,0	./.	1/1:3,1:4:3.01:73,3,0	./.	1/1:5,2:7:6.02:145,6,0	./.	0/0:13,0:13:18.06:0,18,293	1/1:5,5:10:18.06:403,18,0	1/1:4,3:7:9.03:218,9,0	0/1:12,3:16:30.28:318,0,30
chr10	90817740	.	TA	T	565.32	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=4.785;DP=310;FS=5.356;HRun=9;HaplotypeScore=54.6929;InbreedingCoeff=0.7027;MQ=63.30;MQ0=2;MQRankSum=-2.218;QD=15.70;ReadPosRankSum=-2.465;VQSLOD=3.1381;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.16:0,54,623	1/1:0,5:5:15.01:137,15,0	0/0:7,0:5:6:0,6,57	0/0:10,0:6:9.03:0,9,104	0/0:15,0:15:12.75:0,13,193	0/0:14,0:14:6.94:0,7,133	0/0:8,0:8:23.08:0,23,124	0/0:28,0:28:63.59:0,64,376	0/0:7,0:7:17.58:0,18,111	0/0:12,0:12:36.11:0,36,414	0/0:8,0:8:24.07:0,24,277	0/0:9,0:9:27.08:0,27,312	0/0:11,0:11:33.10:0,33,381	0/0:5,0:5:15.04:0,15,173	1/1:0,5:5:15.01:137,15,0	0/0:9,0:9:27.08:0,27,312	1/1:3,16:19:47.93:426,48,0	0/0:12,1:12:27.08:0,27,312	0/0:15,0:15:17.50:0,18,202	0/0:6,0:6:17.50:0,18,103	0/1:7,0:7:3:3,0,89	0/0:6,0:6:18.04:0,18,198	0/0:4,0:4:11.68:0,12,73	0/0:3,0:3:6.66:0,7,33	0/0:15,0:15:39.12:0,39,450	0/0:9,0:9:23.30:0,23,143	0/0:15,0:15:1.77:0,2,215	0/0:24,0:24:61.35:0,61,363
chr10	90820097	.	TC	T	783.63	PASS	AB=0.979;AC=26;AF=0.464;AN=56;BaseQRankSum=4.961;DP=304;FS=7.556;HRun=9;HaplotypeScore=46.7744;InbreedingCoeff=0.4503;MQ=79.02;MQ0=0;MQRankSum=-0.129;QD=5.29;ReadPosRankSum=-0.114;VQSLOD=0.0247;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,2:28:0.74:0,1,478	0/0:4,0:4:9.01:0,9,93	0/1:6,0:7:21.75:22,0,35	0/1:10,0:9:4.93:5,0,64	0/1:7,0:7:8.20:41,0,8	0/1:11,0:11:8.91:60,0,9	1/1:8,0:8:5.88:38,6,0	0/1:15,0:15:1.69:64,0,2	1/1:11,0:11:2.76:123,3,0	0/0:12,0:12:27.08:0,27,309	0/0:6,0:6:11.98:0,12,112	0/0:18,0:18:42.08:0,42,442	0/0:11,0:11:26.44:0,26,283	0/0:16,0:16:33.09:0,33,375	0/0:19,0:19:48.10:0,48,521	0/0:16,0:16:27.08:0,27,309	0/0:15,0:15:39.10:0,39,441	0/1:12,2:14:17.69:18,0,296	1/1:10,0:10:21.36:97,21,0	1/1:7,0:7:8.74:49,9,0	1/1:17,0:17:27.34:142,27,0	0/0:6,0:6:9:0,9,90	1/1:4,0:4:5.73:30,6,0	1/1:11,0:11:12.94:95,13,0	0/0:5,0:5:3.01:0,3,34	1/1:5,0:5:5.75:29,6,0	1/1:9,0:9:20.70:141,21,0	1/1:2,0:2:2.90:16,3,0
chr10	90820106	.	CG	C	2509.42	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-3.017;DP=285;FS=10.279;HRun=1;HaplotypeScore=40.3930;InbreedingCoeff=0.6464;MQ=81.83;MQ0=0;MQRankSum=-1.163;QD=19.30;ReadPosRankSum=-1.293;VQSLOD=2.2678;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:66.87:0,67,834	0/0:4,0:4:9.01:0,9,106	0/1:9,0:9:9.85:10,0,91	0/0:7,1:8:1.41:0,1,74	1/1:0,4:4:9.03:118,9,0	1/1:1,9:10:12.04:162,12,0	1/1:0,6:6:6.02:82,6,0	1/1:1,12:13:27.05:325,27,0	1/1:0,11:11:24.08:323,24,0	0/0:13,0:13:25.27:0,25,151	0/0:5,0:5:8.56:0,9,43	0/0:16,0:16:36.23:0,36,221	0/0:12,0:12:11.79:0,12,157	0/0:14,0:14:32.12:0,32,212	0/0:15,0:15:42.11:0,42,558	0/0:12,0:12:4.43:0,4,135	0/0:15,0:15:42.02:0,42,511	0/1:13,0:13:40.78:41,0,122	1/1:0,12:12:36.03:394,36,0	1/1:0,4:4:9.03:119,9,0	1/1:2,13:15:35.69:420,36,0	0/0:11,0:11:3.15:0,3,29	1/1:0,3:3:6.02:81,6,0	1/1:0,11:11:18.04:228,18,0	0/1:5,0:5:0.23:0,0,10	1/1:1,2:3:6.02:83,6,0	1/1:0,9:9:21.07:281,21,0	1/1:0,2:2:3.01:42,3,0
chr10	90820513	.	GCACA	G	765.24	PASS	AB=0.863;AC=13;AF=0.295;AN=44;BaseQRankSum=-1.513;DP=328;FS=1.028;HRun=0;HaplotypeScore=60.6354;InbreedingCoeff=0.1657;MQ=74.40;MQ0=11;MQRankSum=0.261;QD=5.80;ReadPosRankSum=2.267;VQSLOD=1.5405;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:8.70:0,9,130	0/0:3,0:4:6.02:0,6,114	./.	./.	./.	1/1:8,2:9:3.01:47,3,0	1/1:16,7:25:6.35:179,6,0	./.	0/1:14,9:21:9.88:126,0,10	0/0:6,0:7:6.01:0,6,80	0/0:5,0:5:2.85:0,3,37	0/0:9,0:14:3.01:0,3,52	0/0:2,0:2:3.01:0,3,60	0/0:9,0:10:9.02:0,9,140	0/0:7,0:12:17.80:0,18,297	0/1:6,0:8:23.78:24,0,46	0/0:15,0:22:21.96:0,22,409	0/0:12,0:11:15.05:0,15,271	./.	0/1:2,0:2:8.44:41,0,8	0/1:21,1:23:13.94:140,0,14	0/0:10,0:10:2.79:0,3,51	./.	1/1:15,7:24:5.55:203,6,0	0/0:4,0:4:6.02:0,6,95	0/0:5,0:4:2.50:0,2,9	0/1:6,2:7:67.01:82,0,67	1/1:5,0:4:5.81:58,6,0
chr10	90820715	.	C	CTA	90.02	PASS	AC=6;AF=0.500;AN=12;BaseQRankSum=-1.537;DP=62;FS=0.000;HRun=0;HaplotypeScore=9.4825;MQ=14.01;MQ0=37;MQRankSum=-1.537;QD=10.00;ReadPosRankSum=0.406;VQSLOD=2.7544;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:1:3.01:0,3,43	./.	./.	./.	./.	./.	./.	1/1:1,3:2:6.02:110,6,0	./.	./.	./.	./.	0/0:1,0:1:3.01:0,3,43	./.	./.	0/0:2,0:1:3.01:0,3,43	./.	./.	1/1:1,3:2:3.01:55,3,0	./.	./.	./.	./.	./.	./.	1/1:1,0:1:0.47:1,0,0	./.	./.
chr10	90821070	.	C	CTA	10626.77	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-9.560;DP=590;FS=0.000;HRun=0;HaplotypeScore=74.3280;InbreedingCoeff=0.9692;MQ=55.12;MQ0=52;MQRankSum=-1.520;QD=42.51;ReadPosRankSum=-2.385;VQSLOD=5.7837;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:93.31:0,93,1325	0/0:4,0:4:6.02:0,6,86	0/0:31,0:11:31.66:0,32,427	0/0:34,0:12:35.69:0,36,446	1/1:1,10:11:30.10:550,30,0	1/1:1,8:9:24.08:439,24,0	1/1:1,36:36:77.94:1428,78,0	1/1:1,10:11:30.09:498,30,0	1/1:2,11:12:21.07:384,21,0	0/0:12,0:12:33.11:0,33,471	0/0:13,0:11:30.10:0,30,430	0/0:27,0:25:60.20:0,60,859	0/0:13,0:12:33.11:0,33,472	0/0:32,0:32:78.26:0,78,1117	0/0:23,0:22:54.18:0,54,773	0/0:17,0:16:45.15:0,45,644	0/0:51,0:50:99:0,132,1892	0/0:31,0:30:81.27:0,81,1158	1/1:0,6:7:21.05:337,21,0	1/1:0,7:7:18.06:313,18,0	1/1:2,51:48:99:2408,132,0	0/0:4,0:4:9.03:0,9,129	1/1:0,13:13:33.11:605,33,0	1/1:6,35:39:81.02:1459,81,0	0/0:10,0:10:24.08:0,24,344	1/1:2,18:20:11.18:887,11,0	1/1:0,17:17:48.16:879,48,0	1/1:0,9:9:24.08:440,24,0
chr10	90821285	.	G	GTTTTT	4813.23	PASS	AB=0.900;AC=48;AF=0.857;AN=56;BaseQRankSum=0.475;DP=502;FS=6.715;HRun=18;HaplotypeScore=121.3940;InbreedingCoeff=0.3371;MQ=71.26;MQ0=5;MQRankSum=-5.545;QD=12.28;ReadPosRankSum=0.302;VQSLOD=0.5988;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:37:7.87:0,8,508	1/1:3,0:3:3.01:59,3,0	0/0:45,0:16:8.29:0,8,72	0/0:26,0:17:4.62:0,5,91	1/1:14,0:11:2.97:21,3,0	1/1:15,0:21:18.05:323,18,0	1/1:19,0:20:26.26:396,26,0	1/1:32,0:32:12.93:463,13,0	1/1:18,0:18:11.83:193,12,0	1/1:15,0:15:8.99:154,9,0	1/1:11,0:11:4.26:39,4,0	1/1:18,0:18:13.60:270,14,0	1/1:13,0:13:13.65:213,14,0	1/1:17,0:16:15.15:275,15,0	1/1:10,0:10:9.03:186,9,0	1/1:13,0:13:17.98:311,18,0	1/1:17,0:24:28.02:467,28,0	1/1:14,0:13:4.83:73,5,0	1/1:26,0:26:21.03:332,21,0	0/1:6,0:6:16.84:17,0,35	1/1:7,0:6:3.01:70,3,0	1/1:6,0:5:2.94:18,3,0	1/1:9,0:9:6.02:82,6,0	1/1:25,0:25:5.03:138,5,0	1/1:10,0:10:4.57:72,5,0	1/1:22,0:22:27.06:471,27,0	0/1:18,2:24:26.20:126,0,26	1/1:7,2:11:5.23:45,5,0
chr10	90821536	.	A	AGTATAT	4684.67	PASS	AB=0.512;AC=25;AF=0.446;AN=56;BaseQRankSum=-5.634;DP=656;FS=2.735;HRun=0;HaplotypeScore=140.6103;InbreedingCoeff=0.7873;MQ=66.47;MQ0=8;MQRankSum=-0.381;QD=14.28;ReadPosRankSum=-4.209;VQSLOD=3.2408;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:45:99:0,102,1694	0/0:4,0:4:6.02:0,6,97	0/0:29,0:19:57.08:0,57,872	0/0:20,0:14:32.46:0,32,462	1/1:5,13:23:6.02:119,6,0	1/1:0,13:22:3.01:108,3,0	1/1:1,19:31:3.01:35,3,0	1/1:33,0:33:90.12:1558,90,0	1/1:2,15:22:3.01:108,3,0	0/0:14,0:18:47.88:0,48,707	0/0:7,0:11:15.04:0,15,236	0/0:18,0:27:54.21:0,54,892	0/0:10,0:18:45.15:0,45,754	0/0:11,0:21:39.13:0,39,598	0/0:23,0:25:72.04:0,72,1206	0/0:14,0:22:66.23:0,66,1136	0/0:40,0:40:99:0,105,1923	0/0:14,0:29:40.58:0,41,1093	1/1:25,0:25:72.15:1225,72,0	1/1:2,18:23:3.01:37,3,0	1/1:8,20:33:2.99:52,3,0	0/0:6,0:9:14.95:0,15,203	1/1:5,11:20:6.02:116,6,0	0/1:2,27:44:0:0,0,0	0/0:6,0:9:24.05:0,24,372	1/1:17,0:17:42.07:603,42,0	1/1:5,12:21:19.77:509,20,0	1/1:0,12:13:6.02:215,6,0
chr10	90821537	.	G	GTA	1572.20	PASS	AB=0.804;AC=22;AF=0.407;AN=54;BaseQRankSum=6.708;DP=651;FS=0.973;HRun=0;HaplotypeScore=113.2708;InbreedingCoeff=0.6248;MQ=65.98;MQ0=9;MQRankSum=0.713;QD=5.66;ReadPosRankSum=-2.000;VQSLOD=2.8235;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,102,844	0/0:3,0:3:5.99:0,6,49	0/0:29,0:19:29.39:0,29,378	0/0:20,0:14:19.33:0,19,228	1/1:20,0:23:6.01:61,6,0	1/1:21,0:21:3:25,3,0	1/1:28,0:27:0.13:14,0,0	0/1:35,0:35:20.91:503,0,21	1/1:23,0:23:3:25,3,0	0/0:18,0:18:39.41:0,39,365	0/0:13,0:13:14.99:0,15,118	0/0:27,0:27:56.46:0,56,462	0/0:18,0:18:44.93:0,45,367	0/0:19,0:19:38.78:0,39,300	0/0:26,0:26:52.34:0,52,728	0/0:24,0:24:67.49:0,67,572	0/0:42,0:42:99:0,105,1089	0/0:30,0:29:65.44:0,65,557	1/1:6,21:27:37.24:554,37,0	1/1:21,0:21:2.96:19,3,0	1/1:28,0:30:3:30,3,0	0/0:9,0:9:14.88:0,15,121	1/1:18,1:19:6.02:83,6,0	./.	0/0:9,0:9:22.52:0,23,176	0/1:6,10:17:76.18:245,0,76	1/1:18,0:21:18.84:144,19,0	1/1:12,0:12:5.99:50,6,0
chr10	90822413	.	A	AAAAG	15118.96	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-12.541;DP=625;FS=1.157;HRun=0;HaplotypeScore=101.3754;InbreedingCoeff=0.9843;MQ=78.60;MQ0=1;MQRankSum=-3.987;QD=42.35;ReadPosRankSum=4.083;VQSLOD=5.2992;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:78.24:0,78,1204	1/1:1,3:4:7.27:148,7,0	0/0:48,0:30:39.04:0,39,444	0/0:27,0:17:13.59:0,14,147	1/1:4,15:21:45.08:914,45,0	1/1:3,25:29:60.20:1396,60,0	1/1:4,15:22:33.11:758,33,0	1/1:15,18:37:50.98:1089,51,0	1/1:4,13:19:42.14:930,42,0	0/0:20,0:20:51.02:0,51,775	0/0:16,0:16:29.92:0,30,410	0/0:23,0:23:45.14:0,45,707	0/0:12,0:12:26.78:0,27,384	0/0:13,0:13:38.90:0,39,422	1/1:4,21:27:54.18:1266,54,0	0/0:25,0:25:72.06:0,72,1015	1/1:5,24:31:45.15:1084,45,0	0/0:17,0:17:45.07:0,45,616	1/1:5,13:19:42.13:888,42,0	1/1:4,14:18:45.08:991,45,0	1/1:3,13:18:21.07:482,21,0	0/0:15,0:15:38.96:0,39,501	1/1:3,10:13:27.09:651,27,0	1/1:1,17:21:51.17:1124,51,0	0/0:17,0:17:36.12:0,36,569	1/1:6,19:31:29.16:1399,29,0	1/1:6,15:24:36.11:767,36,0	1/1:3,16:22:54.18:1232,54,0
chr10	90823571	.	CGTGT	C	6339.65	PASS	AB=0.577;AC=25;AF=0.463;AN=54;BaseQRankSum=6.479;DP=448;FS=10.572;HRun=0;HaplotypeScore=75.3244;InbreedingCoeff=0.7836;MQ=63.75;MQ0=9;MQRankSum=1.144;QD=25.16;ReadPosRankSum=4.156;VQSLOD=3.3474;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:21.80:0,22,1219	0/0:1,0:2:0.80:0,1,9	0/0:26,0:11:18.03:0,18,268	0/0:24,0:12:9.02:0,9,109	1/1:2,7:9:15.52:255,16,0	1/1:2,10:12:24.08:407,24,0	1/1:6,24:32:48.16:774,48,0	1/1:3,5:7:14.96:186,15,0	1/1:2,10:13:27.09:435,27,0	0/0:13,0:12:27.09:0,27,600	0/0:3,0:3:6.02:0,6,150	0/0:17,0:17:42.14:0,42,1006	0/0:13,0:14:38.80:0,39,800	0/0:12,0:12:33.07:0,33,702	0/0:1,0:4:2.80:0,3,13	0/0:7,0:7:21.04:0,21,423	0/1:8,1:28:8.88:9,0,132	0/0:33,0:33:68.62:0,69,1334	1/1:11,2:13:14.53:194,15,0	1/1:0,1:1:3.01:51,3,0	1/1:11,65:78:99:2086,124,0	0/0:2,0:2:3.01:0,3,75	./.	1/1:6,28:34:75.26:1272,75,0	0/0:8,0:8:21.05:0,21,421	1/1:7,6:11:18.06:264,18,0	1/1:1,3:4:9.03:153,9,0	1/1:1,4:5:15.05:254,15,0
chr10	90826819	.	CT	C	1863.87	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.457;DP=657;FS=0.000;HRun=3;HaplotypeScore=64.4432;InbreedingCoeff=0.9855;MQ=73.04;MQ0=0;MQRankSum=-1.606;QD=30.56;ReadPosRankSum=1.510;VQSLOD=3.3172;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1553	1/1:0,10:10:30.09:372,30,0	0/0:18,0:17:48.13:0,48,655	0/0:25,0:25:67.85:0,68,920	0/0:19,0:19:54.18:0,54,778	0/0:19,0:19:54.17:0,54,759	0/0:26,0:26:78.24:0,78,1088	0/0:41,0:41:99:0,111,1545	0/0:24,0:24:69.23:0,69,994	0/0:16,0:16:48.16:0,48,690	0/0:25,0:25:72.23:0,72,1020	0/0:24,0:24:72.22:0,72,1017	0/0:20,0:20:60.18:0,60,839	0/0:20,0:20:60.20:0,60,864	1/1:1,30:31:84.26:1041,84,0	0/0:32,0:32:96.32:0,96,1382	1/1:2,18:20:10.96:589,11,0	0/0:23,0:23:66.22:0,66,947	0/0:19,0:19:54.18:0,54,778	0/0:17,0:17:48.15:0,48,673	0/0:69,0:69:99:0,202,2847	0/0:12,0:12:33.11:0,33,473	0/0:10,0:10:30.10:0,30,435	0/0:27,0:27:75.25:0,75,1080	0/0:18,0:18:54.18:0,54,774	0/0:25,0:25:75.24:0,75,1062	0/0:16,0:16:45.10:0,45,587	0/0:14,0:14:39.13:0,39,562
chr10	90829992	.	G	GGTGTGTGTGT	6022.30	PASS	AB=1.000;AC=45;AF=0.900;AN=50;BaseQRankSum=2.050;DP=367;FS=0.000;HRun=0;HaplotypeScore=135.4922;InbreedingCoeff=0.4468;MQ=53.71;MQ0=11;MQRankSum=-4.384;QD=21.51;ReadPosRankSum=-0.468;VQSLOD=3.5572;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:31:30.68:0,31,940	0/1:2,0:2:0:0,0,0	./.	0/0:20,0:10:5.99:0,6,61	1/1:12,0:11:3.01:45,3,0	1/1:14,0:14:6.01:141,6,0	1/1:20,0:18:2.90:8,3,0	1/1:15,0:13:17.85:344,18,0	1/1:17,0:18:6.02:261,6,0	1/1:20,0:18:24.08:728,24,0	1/1:5,0:5:3.01:97,3,0	1/1:13,0:12:15.03:350,15,0	1/1:12,0:10:12.04:331,12,0	1/1:15,0:15:9.03:293,9,0	1/1:9,5:14:18.53:818,19,0	1/1:10,0:10:9.01:253,9,0	1/1:15,1:16:15.05:404,15,0	1/1:10,0:9:2.99:23,3,0	1/1:15,0:15:22.31:759,22,0	1/1:4,0:4:0.47:1,0,0	1/1:12,0:11:3.01:98,3,0	./.	1/1:9,0:9:3.01:104,3,0	1/1:16,0:17:9.50:250,10,0	./.	1/1:7,0:5:6.01:134,6,0	1/1:15,0:14:15.04:454,15,0	1/1:4,0:4:5.51:128,6,0
chr10	90830041	.	TG	T	353.04	PASS	AB=0.969;AC=15;AF=0.278;AN=54;BaseQRankSum=1.282;DP=318;FS=5.153;HRun=1;HaplotypeScore=67.4072;InbreedingCoeff=0.2034;MQ=70.51;MQ0=7;MQRankSum=-0.246;QD=2.28;ReadPosRankSum=1.739;VQSLOD=-0.6983;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:53.85:0,54,678	./.	0/0:32,0:12:28.90:0,29,316	0/1:24,0:15:8.30:8,0,168	1/1:7,0:7:13.99:62,14,0	0/1:11,0:11:2.12:29,0,2	0/1:15,0:15:22.96:23,0,42	0/1:15,0:15:22.80:23,0,155	0/1:12,0:12:12.09:34,0,12	0/0:7,0:7:18.06:0,18,250	0/0:5,0:5:15.05:0,15,211	0/0:14,0:14:26.57:0,27,409	0/0:10,0:10:27.04:0,27,374	0/0:10,0:10:26.96:0,27,315	0/0:11,0:11:26.38:0,26,298	0/0:8,0:8:13.74:0,14,190	0/0:6,0:6:12.02:0,12,126	0/0:9,0:9:27.09:0,27,418	0/1:14,1:14:18.72:83,0,19	1/1:8,0:7:4:27,4,0	0/1:11,0:10:4.29:25,0,4	0/0:6,0:6:12.04:0,12,163	0/1:6,0:6:9.51:10,0,21	1/1:19,1:20:13.51:109,14,0	0/0:10,0:10:24.08:0,24,353	0/0:11,0:11:11.30:0,11,133	0/1:8,2:11:8.69:82,0,9	0/0:3,0:2:2.07:0,2,19
chr10	90830042	.	GC	G	1947.16	PASS	AB=0.667;AC=24;AF=0.444;AN=54;BaseQRankSum=-1.622;DP=333;FS=10.341;HRun=8;HaplotypeScore=64.3577;InbreedingCoeff=0.7639;MQ=69.65;MQ0=7;MQRankSum=-0.041;QD=13.43;ReadPosRankSum=0.461;VQSLOD=2.2843;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:42.94:0,43,408	./.	0/0:32,0:12:19.14:0,19,148	0/0:24,0:15:2.69:0,3,100	1/1:1,6:7:18.03:171,18,0	1/1:5,6:11:18:165,18,0	1/1:4,11:15:11.46:164,11,0	0/1:5,10:15:18.66:167,0,19	1/1:4,8:12:20.02:169,20,0	0/0:7,0:7:17.54:0,18,148	0/0:5,0:5:14.99:0,15,163	0/0:15,0:15:21.48:0,21,280	0/0:11,0:11:25.31:0,25,281	0/0:10,0:10:25.30:0,25,190	0/0:12,0:12:20.96:0,21,196	0/0:10,0:10:14.07:0,14,150	0/0:9,0:9:11.91:0,12,105	0/0:13,0:13:30.01:0,30,324	1/1:4,11:14:29.71:316,30,0	1/1:3,5:7:17.87:151,18,0	1/1:5,6:10:14.98:136,15,0	0/0:6,0:6:14.97:0,15,143	1/1:2,4:6:9.51:105,10,0	1/1:3,17:20:35.80:332,36,0	0/0:10,0:10:23.94:0,24,252	0/1:7,4:11:55.55:61,0,56	1/1:7,4:11:22.69:197,23,0	1/1:3,0:2:2.97:20,3,0
chr10	90830049	.	CCT	C	391.75	PASS	AB=0.941;AC=13;AF=0.232;AN=56;BaseQRankSum=0.321;DP=342;FS=2.447;HRun=0;HaplotypeScore=65.6120;InbreedingCoeff=-0.0169;MQ=67.80;MQ0=12;MQRankSum=-0.621;QD=3.18;ReadPosRankSum=-0.445;VQSLOD=1.1656;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:48.44:0,48,688	0/0:1,0:1:2.97:0,3,20	0/0:32,0:10:16.96:0,17,175	0/0:20,0:12:21.86:0,22,218	0/0:6,0:6:4.85:0,5,10	1/1:7,1:8:1.95:43,2,0	0/0:15,0:14:9.60:0,10,51	0/1:14,0:14:42.89:43,0,91	0/1:11,1:11:36.50:43,0,36	0/0:8,0:8:20.62:0,21,237	0/0:5,0:5:15.05:0,15,261	0/0:15,0:15:30.29:0,30,481	0/0:12,0:11:28.31:0,28,450	0/0:12,0:12:29.54:0,30,333	0/0:12,0:12:23.84:0,24,298	0/0:9,0:8:22.46:0,22,303	0/0:12,0:12:14.94:0,15,184	0/0:15,0:14:42.03:0,42,627	0/1:16,1:16:47.93:121,0,48	0/1:8,1:8:16.56:56,0,17	0/1:6,1:7:22.56:36,0,23	0/0:8,0:8:14.98:0,15,221	0/1:6,0:5:8.46:30,0,8	0/1:20,1:21:18.38:52,0,18	0/0:12,0:12:31.62:0,32,415	0/1:11,1:13:33.28:33,0,149	0/1:13,0:12:49.49:64,0,49	1/1:2,0:1:2.97:20,3,0
chr10	90830271	.	CT	C	848.52	PASS	AB=0.905;AC=23;AF=0.411;AN=56;BaseQRankSum=1.582;DP=448;FS=0.000;HRun=14;HaplotypeScore=55.1917;InbreedingCoeff=0.3196;MQ=73.94;MQ0=6;MQRankSum=1.095;QD=3.81;ReadPosRankSum=0.817;VQSLOD=-0.1103;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:48.05:0,48,446	0/1:8,2:11:14.28:14,0,144	0/0:58,0:26:13:0,13,154	0/0:27,1:8:9.26:0,9,57	0/0:11,1:13:15.24:0,15,261	0/1:14,0:15:3.73:4,0,226	0/0:11,0:11:15.02:0,15,139	0/0:9,0:21:29.10:0,29,161	0/1:9,0:10:23.51:24,0,77	1/1:9,10:19:4.81:158,5,0	1/1:1,8:10:19.31:114,19,0	1/1:7,2:9:15.26:81,15,0	1/1:1,11:12:20.81:144,21,0	0/1:7,3:10:53.15:62,0,53	0/0:13,0:13:19.37:0,19,241	1/1:0,8:8:14.88:103,15,0	0/1:25,2:27:11.63:12,0,438	0/1:15,3:19:3.23:108,0,3	0/1:25,2:28:10.29:10,0,297	0/0:15,0:15:15.46:0,15,131	0/1:12,0:13:17.22:17,0,110	1/1:3,3:5:8.93:62,9,0	0/0:7,0:7:11.05:0,11,89	0/0:10,0:10:24.03:0,24,222	1/1:6,2:12:19.98:104,20,0	0/0:15,1:16:9.37:0,9,208	0/1:11,1:13:22.17:22,0,206	0/0:11,0:11:7.02:0,7,110
chr10	90830370	.	C	CG	2014.34	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.408;DP=479;FS=0.000;HRun=0;HaplotypeScore=46.8256;InbreedingCoeff=0.9307;MQ=66.51;MQ0=0;MQRankSum=0.043;QD=38.74;ReadPosRankSum=2.748;VQSLOD=3.5915;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.27:0,87,1196	1/1:0,3:3:9.03:143,9,0	0/0:20,0:19:47.11:0,47,598	0/0:21,0:19:53.42:0,53,636	0/0:10,0:10:27.09:0,27,377	0/0:12,0:12:33.10:0,33,445	0/0:27,0:27:78.25:0,78,1074	0/0:27,0:27:78.25:0,78,1075	0/0:18,0:18:54.16:0,54,736	0/0:20,0:20:60.19:0,60,812	0/0:8,0:8:24.03:0,24,312	0/0:19,0:19:57.19:0,57,796	0/0:14,0:14:42.14:0,42,584	0/0:18,0:18:51.09:0,51,671	1/1:0,16:16:42.14:669,42,0	0/0:14,0:14:42.13:0,42,572	1/1:2,31:33:84.29:1339,84,0	0/0:20,0:20:54.18:0,54,747	0/0:14,0:14:39.13:0,39,540	0/0:14,0:14:42.14:0,42,586	0/0:42,0:42:99:0,123,1700	0/0:9,0:9:27.04:0,27,354	0/0:4,0:4:12.04:0,12,167	0/0:24,0:23:72.21:0,72,970	0/0:11,0:11:30.10:0,30,414	0/0:15,0:15:45.15:0,45,629	0/0:14,0:14:42.14:0,42,587	0/0:2,0:2:6.02:0,6,84
chr10	90831732	.	GA	G	1033.80	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.052;DP=420;FS=0.000;HRun=2;HaplotypeScore=51.8988;InbreedingCoeff=0.9625;MQ=76.98;MQ0=1;MQRankSum=-0.312;QD=25.84;ReadPosRankSum=0.666;VQSLOD=3.2257;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.12:0,72,963	1/1:0,6:6:9.03:126,9,0	0/0:23,0:19:18.55:0,19,573	0/0:23,2:17:16.94:0,17,377	0/0:15,0:15:45.15:0,45,657	0/0:18,0:17:45.12:0,45,619	0/0:15,0:15:39.11:0,39,547	0/0:23,0:23:63.20:0,63,906	0/0:9,0:9:21.07:0,21,304	0/0:19,0:19:57.19:0,57,834	0/0:19,0:19:57.14:0,57,757	0/0:14,0:14:42.09:0,42,537	0/0:14,0:14:36.09:0,36,488	0/0:7,0:7:21.07:0,21,304	1/1:0,16:16:30.10:418,30,0	0/0:11,0:11:33.08:0,33,443	1/1:0,18:18:45.15:628,45,0	0/0:15,0:15:36.10:0,36,506	0/0:15,0:15:40.99:0,41,517	0/0:15,0:15:44.99:0,45,589	0/0:6,0:6:18.06:0,18,263	0/0:15,0:15:45.10:0,45,633	0/0:10,0:10:23.57:0,24,320	0/0:10,0:10:27.02:0,27,350	0/0:8,0:8:18.05:0,18,244	0/0:12,0:12:36.09:0,36,472	0/0:19,0:19:51.12:0,51,685	0/0:19,0:19:42.12:0,42,613
chr10	90831757	.	T	TA	1964.18	PASS	AB=0.768;AC=23;AF=0.411;AN=56;BaseQRankSum=-5.702;DP=456;FS=8.424;HRun=14;HaplotypeScore=70.1092;InbreedingCoeff=0.4289;MQ=71.64;MQ0=3;MQRankSum=-0.040;QD=7.44;ReadPosRankSum=-0.294;VQSLOD=2.0913;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:28.28:0,28,179	0/0:7,0:7:2.80:0,3,19	0/0:24,0:15:17.45:0,17,106	0/1:20,0:13:9.43:9,0,11	1/1:14,10:26:3.92:233,4,0	1/1:6,13:19:7.57:180,8,0	0/1:4,7:11:20.56:88,0,21	1/1:11,17:29:47.19:450,47,0	1/1:1,8:10:14.84:120,15,0	0/1:17,2:19:17.23:17,0,156	0/0:16,0:16:38.27:0,38,245	0/0:9,0:12:19.75:0,20,121	0/0:12,0:15:32.56:0,33,185	0/0:7,0:7:11.77:0,12,77	0/0:12,0:12:26.56:0,27,171	0/0:11,0:11:23.55:0,24,150	0/0:23,0:23:50.17:0,50,325	0/0:13,2:15:6.18:0,6,166	1/1:7,10:18:17.37:251,17,0	0/1:6,7:16:2.41:111,0,2	0/1:8,0:8:13.28:18,0,13	0/0:15,0:15:29.47:0,29,192	0/1:7,12:19:20.71:88,0,21	0/1:6,4:11:22.91:23,0,58	0/0:10,0:11:20.61:0,21,133	1/1:6,9:15:23.87:192,24,0	1/1:6,14:20:26.67:225,27,0	1/1:11,8:19:4.57:153,5,0
chr10	90832303	.	CTT	C	6965.98	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=9.753;DP=577;FS=5.881;HRun=12;HaplotypeScore=93.8379;InbreedingCoeff=0.9816;MQ=81.44;MQ0=4;MQRankSum=-2.141;QD=21.30;ReadPosRankSum=4.121;VQSLOD=4.4959;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,104,1500	1/1:3,10:13:17.87:183,18,0	0/0:44,0:24:40.98:0,41,437	0/0:34,0:26:16.93:0,17,295	1/1:7,24:31:65.94:639,66,0	1/1:2,13:15:24.04:244,24,0	1/1:5,12:17:30.03:305,30,0	1/1:7,25:32:72.59:733,73,0	1/1:2,16:18:39.06:397,39,0	0/0:22,0:22:51.17:0,51,759	0/0:17,0:17:33.11:0,33,482	0/0:11,0:11:24.08:0,24,353	0/0:17,0:17:39.13:0,39,568	0/0:11,0:11:33.05:0,33,440	1/1:1,13:15:38.80:378,39,0	0/0:16,0:16:36.12:0,36,538	1/1:4,35:38:81.14:824,81,0	0/0:11,0:11:27.06:0,27,377	1/1:6,19:25:57.06:580,57,0	1/1:3,13:16:39.07:397,39,0	1/1:1,17:18:39.08:397,39,0	0/0:9,0:10:26.58:0,27,366	1/1:2,13:15:30.05:305,30,0	1/1:2,13:14:33.07:336,33,0	0/0:17,0:17:39.08:0,39,523	1/1:5,19:24:57.07:579,57,0	1/1:5,22:29:62.75:609,63,0	1/1:2,3:5:6:61,6,0
chr10	90832693	.	A	AG	319.54	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=5.378;DP=468;FS=2.650;HRun=2;HaplotypeScore=54.1010;InbreedingCoeff=0.9097;MQ=65.92;MQ0=4;MQRankSum=-6.034;QD=17.75;ReadPosRankSum=1.441;VQSLOD=3.8861;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:44.18:0,44,724	1/1:0,2:2:6.02:86,6,0	0/0:10,1:7:21.07:0,21,260	0/0:13,0:13:35.32:0,35,406	0/0:31,0:30:75.23:0,75,924	0/0:22,0:22:63.20:0,63,781	0/0:31,0:31:80.43:0,80,1000	0/0:18,0:18:51.16:0,51,632	0/0:23,0:23:60.19:0,60,744	0/0:17,0:17:51.16:0,51,632	0/0:16,0:16:48.14:0,48,583	0/0:20,0:20:57.18:0,57,707	0/0:10,0:10:27.08:0,27,335	0/0:12,0:12:36.10:0,36,434	1/1:0,16:16:24.08:344,24,0	0/0:11,0:11:33.10:0,33,409	./.	0/0:17,0:17:48.15:0,48,595	0/0:17,0:15:42.13:0,42,521	0/0:21,0:21:63.20:0,63,781	0/0:9,0:9:27.08:0,27,335	0/0:15,0:15:45.14:0,45,558	0/0:12,0:12:36.11:0,36,446	0/0:34,0:34:96.30:0,96,1189	0/0:15,0:15:45.14:0,45,558	0/0:20,0:19:54.13:0,54,631	0/0:19,0:19:51.16:0,51,632	0/0:4,0:4:9.03:0,9,112
chr10	90832716	.	T	TTA	144.67	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=4.176;DP=407;FS=0.000;HRun=0;HaplotypeScore=54.8026;InbreedingCoeff=0.7940;MQ=55.82;MQ0=19;MQRankSum=-3.831;QD=20.67;ReadPosRankSum=-2.568;VQSLOD=2.9807;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:61.45:0,61,978	1/1:0,2:2:6.02:98,6,0	0/0:6,0:1:3.01:0,3,38	0/0:7,0:6:18.06:0,18,288	0/0:25,0:24:65.98:0,66,1076	0/0:18,0:18:48.16:0,48,783	0/0:29,0:27:78.27:0,78,1268	0/0:14,0:14:42.14:0,42,675	0/0:21,0:19:54.18:0,54,875	0/0:16,0:15:42.13:0,42,637	0/0:13,0:13:39.13:0,39,628	0/0:18,0:18:54.18:0,54,877	0/0:10,0:10:30.10:0,30,489	0/0:14,0:13:39.09:0,39,607	1/1:0,5:5:12.04:152,12,0	0/0:11,0:11:33.11:0,33,541	./.	0/0:19,0:19:48.16:0,48,775	0/0:15,0:10:30.10:0,30,489	0/0:23,0:21:63.19:0,63,979	0/0:12,0:10:27.09:0,27,433	0/0:15,0:14:39.13:0,39,633	0/0:13,0:13:36.12:0,36,585	0/0:27,0:27:78.27:0,78,1273	0/0:10,0:10:27.09:0,27,429	0/0:22,0:20:60.20:0,60,977	0/0:17,0:17:48.16:0,48,779	0/0:2,0:2:6.02:0,6,98
chr10	90832772	.	C	CG	2796.14	PASS	AC=28;AF=0.538;AN=52;BaseQRankSum=0.392;DP=424;FS=19.287;HRun=2;HaplotypeScore=63.7284;InbreedingCoeff=0.9008;MQ=55.48;MQ0=38;MQRankSum=-1.599;QD=11.37;ReadPosRankSum=-1.131;VQSLOD=0.3452;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:35.87:0,36,318	./.	1/1:19,0:6:3.52:21,4,0	0/0:12,0:1:0.89:0,1,2	1/1:3,15:18:28.56:185,29,0	1/1:12,1:13:23.04:200,23,0	1/1:22,2:19:35.37:220,35,0	1/1:20,2:18:38.42:252,38,0	1/1:16,2:17:43.57:338,44,0	0/0:17,0:17:32.97:0,33,303	0/0:12,0:12:14.95:0,15,131	0/0:17,0:17:41.88:0,42,355	0/0:17,0:16:23.74:0,24,186	0/0:11,0:10:25.94:0,26,208	./.	0/0:20,0:19:41.86:0,42,353	0/0:1,0:1:2.88:0,3,15	0/0:20,0:20:41.89:0,42,358	1/1:17,1:15:26.96:258,27,0	1/1:9,0:8:11.19:67,11,0	1/1:13,0:13:28.77:182,29,0	0/0:18,0:17:35.83:0,36,300	1/1:13,1:14:33.57:234,34,0	1/1:26,1:26:37.90:353,38,0	0/0:7,0:6:14.97:0,15,131	1/1:21,0:19:45.45:344,45,0	1/1:19,2:20:44.64:296,45,0	1/1:9,0:7:7.79:52,8,0
chr10	90832993	.	T	TA	8253.38	PASS	AB=0.711;AC=49;AF=0.875;AN=56;BaseQRankSum=-4.357;DP=517;FS=0.000;HRun=11;HaplotypeScore=65.0847;InbreedingCoeff=0.4222;MQ=69.47;MQ0=1;MQRankSum=-0.267;QD=17.90;ReadPosRankSum=0.615;VQSLOD=5.7361;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,2:34:47.09:0,47,534	1/1:1,9:11:29.89:288,30,0	0/0:21,0:14:9.67:0,10,136	0/1:14,0:12:25.09:25,0,46	1/1:4,15:19:24.89:434,25,0	1/1:1,12:13:21.04:213,21,0	1/1:7,18:23:9.83:281,10,0	1/1:14,16:29:45.06:443,45,0	1/1:1,13:14:24.05:244,24,0	1/1:2,12:14:36.05:355,36,0	1/1:1,21:22:50.27:481,50,0	1/1:4,11:15:6.66:235,7,0	1/1:4,8:12:20.99:198,21,0	0/1:2,6:8:14.22:52,0,14	1/1:3,15:17:30.06:303,30,0	1/1:5,18:23:45.09:457,45,0	1/1:3,23:26:60.12:608,60,0	1/1:4,27:33:6.88:625,7,0	1/1:4,15:20:47.71:440,48,0	1/1:8,10:19:29.42:275,29,0	1/1:1,17:19:33.54:336,34,0	1/1:1,5:8:17.71:150,18,0	1/1:2,12:14:33.07:334,33,0	1/1:5,20:26:39.78:561,40,0	0/1:5,8:13:5.20:134,0,5	1/1:5,16:21:6.39:378,6,0	1/1:4,10:14:3.82:220,4,0	1/1:0,5:7:20.71:181,21,0
chr10	90839817	.	T	TG	203.50	PASS	AC=12;AF=1.000;AN=12;DP=110;FS=0.000;HRun=3;HaplotypeScore=9.2739;MQ=12.98;MQ0=69;QD=6.56;VQSLOD=0.5039;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	1/1:1,0:1:2.97:20,3,0	./.	./.	1/1:0,2:1:3.01:42,3,0	./.	./.	./.	./.	./.	./.	./.	1/1:3,7:3:6.02:84,6,0	1/1:3,6:6:3.01:42,3,0	./.	./.	./.	./.	./.	1/1:0,5:2:3.01:42,3,0	./.	1/1:2,2:1:3.01:42,3,0	./.	./.
chr10	90839837	.	GC	G	71.75	PASS	AC=6;AF=0.429;AN=14;BaseQRankSum=1.447;DP=148;FS=6.990;HRun=2;HaplotypeScore=11.4314;MQ=11.95;MQ0=95;MQRankSum=-0.365;QD=3.78;ReadPosRankSum=2.072;VQSLOD=0.2790;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:6:6.02:0,6,90	./.	./.	./.	./.	0/0:5,0:2:6.02:0,6,90	./.	./.	1/1:2,1:2:3.01:39,3,0	./.	./.	./.	./.	./.	./.	./.	1/1:4,5:3:6.02:78,6,0	1/1:5,2:3:3.01:39,3,0	./.	./.	./.	./.	./.	0/0:7,0:2:3.01:0,3,45	./.	0/0:5,0:1:3.01:0,3,45	./.	./.
chr10	90840059	.	C	CT	2993.29	PASS	AB=0.747;AC=25;AF=0.446;AN=56;BaseQRankSum=-4.360;DP=427;FS=0.000;HRun=12;HaplotypeScore=58.2865;InbreedingCoeff=0.3994;MQ=63.55;MQ0=7;MQRankSum=-0.650;QD=11.78;ReadPosRankSum=-0.481;VQSLOD=2.9579;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:46:99:0,111,799	0/0:10,0:10:3.23:0,3,26	0/1:36,0:18:16.29:16,0,41	0/0:23,0:12:16.94:0,17,106	0/1:6,3:9:6.58:86,0,7	0/1:3,12:16:20.55:304,0,21	1/1:2,10:13:13.99:284,14,0	0/1:6,10:16:14.56:220,0,15	1/1:4,11:13:14.15:297,14,0	0/1:18,2:20:5.57:6,0,281	0/0:12,0:11:26.84:0,27,197	0/0:10,0:10:23.85:0,24,175	0/0:8,1:9:20.09:0,20,138	0/1:10,0:10:0.26:0,0,97	0/0:9,1:10:10.52:0,11,69	0/0:9,0:10:19.93:0,20,137	0/1:9,3:11:21.78:47,0,22	0/0:13,0:13:20.67:0,21,207	1/1:4,17:22:20.64:370,21,0	0/1:4,12:16:4.49:208,0,4	1/1:0,7:9:20.71:174,21,0	0/0:19,0:18:47.69:0,48,350	1/1:4,8:12:26.85:240,27,0	1/1:1,9:10:27.04:263,27,0	0/0:10,0:10:22.92:0,23,159	1/1:4,9:15:19.45:304,19,0	0/1:2,8:10:13.74:185,0,14	1/1:3,7:10:20.63:185,21,0
chr10	90840507	.	CAG	C	1226.13	PASS	AB=0.959;AC=10;AF=0.179;AN=56;BaseQRankSum=4.562;DP=643;FS=16.494;HRun=0;HaplotypeScore=123.6727;InbreedingCoeff=0.4963;MQ=67.45;MQ0=12;MQRankSum=-2.203;QD=10.39;ReadPosRankSum=0.775;VQSLOD=2.5592;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:40.66:0,41,1111	1/1:1,6:6:18.06:219,18,0	0/0:40,0:26:39.56:0,40,509	0/0:62,0:38:34.60:0,35,411	0/1:17,1:18:49:49,0,269	0/0:19,0:19:23.73:0,24,298	0/0:27,0:26:48.16:0,48,782	0/0:27,0:27:51.13:0,51,796	0/0:22,0:22:48.16:0,48,781	0/0:18,0:18:39.13:0,39,617	0/1:11,0:11:12.09:12,0,273	0/0:28,0:28:63.21:0,63,1001	0/1:14,1:15:9.37:9,0,365	0/0:21,0:21:30.07:0,30,412	1/1:3,26:29:63.09:719,63,0	0/0:31,0:30:57.59:0,58,758	1/1:7,11:15:30.09:367,30,0	0/0:16,0:16:24.55:0,25,361	0/0:20,0:17:33.11:0,33,521	0/0:15,0:15:15.89:0,16,208	0/0:25,1:25:5.29:0,5,598	0/0:9,0:9:12.04:0,12,196	0/0:14,0:14:18.06:0,18,291	0/0:32,1:33:51.04:0,51,791	0/0:11,0:10:12.04:0,12,191	0/1:19,1:20:9.83:10,0,344	0/0:33,0:33:56.80:0,57,748	0/0:10,0:9:15.02:0,15,176
chr10	90840526	.	GGAGAGAGAGAGAGAGAGAGA	G	4811.47	PASS	AB=0.760;AC=32;AF=0.593;AN=54;BaseQRankSum=7.010;DP=565;FS=30.964;HRun=0;HaplotypeScore=252.3716;InbreedingCoeff=0.1520;MQ=60.39;MQ0=17;MQRankSum=-2.343;QD=12.37;ReadPosRankSum=2.728;VQSLOD=2.6380;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:42:74.36:0,74,3770	0/1:7,0:9:51.01:51,0,158	./.	0/0:39,0:16:3.01:0,3,48	1/1:7,5:11:5.98:58,6,0	1/1:5,15:20:18.06:808,18,0	1/1:20,0:18:8.98:159,9,0	1/1:18,0:17:3:27,3,0	1/1:17,0:18:12.03:199,12,0	0/0:21,0:20:45.04:0,45,654	0/1:5,0:11:0.83:1,0,227	0/0:17,0:25:4.83:0,5,287	0/1:12,0:16:2.12:2,0,68	0/1:9,0:19:76.80:77,0,188	0/1:19,0:25:99:384,0,194	0/1:12,0:27:99:110,0,146	0/1:13,0:13:52.64:53,0,146	0/1:7,0:16:99:103,0,104	1/1:15,6:17:14.86:185,15,0	1/1:5,11:16:15.02:524,15,0	0/1:24,0:20:37.81:52,0,38	0/0:3,0:10:6.02:0,6,101	1/1:6,5:11:9.03:209,9,0	0/1:19,14:33:24.48:154,0,24	0/0:7,0:11:8.17:0,8,85	1/1:6,11:17:33.08:619,33,0	1/1:13,14:27:15.05:803,15,0	1/1:4,5:9:6.02:236,6,0
chr10	90840540	.	A	AAG	228.02	PASS	AB=0.968;AC=8;AF=0.143;AN=56;BaseQRankSum=2.421;DP=505;FS=4.762;HRun=0;HaplotypeScore=113.2391;InbreedingCoeff=-0.1728;MQ=49.88;MQ0=23;MQRankSum=-1.825;QD=2.11;ReadPosRankSum=-3.508;VQSLOD=1.0907;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:82.02:0,82,1117	0/1:10,0:10:6.10:6,0,117	0/0:13,0:1:3.01:0,3,46	0/0:43,0:10:23.44:0,23,321	0/0:7,0:6:6.01:0,6,71	0/0:17,0:17:20.74:0,21,198	0/0:20,0:18:41.48:0,41,537	0/0:17,0:16:42.44:0,42,507	0/0:22,0:22:56.38:0,56,720	0/1:13,6:18:99:196,0,367	0/1:9,0:9:51.85:52,0,116	0/0:21,0:21:41.97:0,42,610	0/1:12,0:11:26.31:26,0,122	0/1:14,0:14:14.19:14,0,179	0/0:24,0:24:34.56:0,35,391	0/1:24,0:23:0.93:1,0,376	0/0:16,0:14:8.85:0,9,169	0/0:15,0:15:17.68:0,18,204	0/0:14,0:11:23.89:0,24,361	0/0:16,0:15:14.58:0,15,142	0/0:31,0:27:39.60:0,40,587	0/1:7,0:7:28.63:32,0,29	0/0:8,0:8:9.02:0,9,115	0/0:24,0:24:20.61:0,21,283	0/1:11,0:10:26.07:26,0,110	0/0:14,0:14:36.01:0,36,526	0/0:24,0:24:38.59:0,39,414	0/0:10,0:9:8.92:0,9,92
chr10	90840542	.	A	AAG	448.60	PASS	AB=0.930;AC=6;AF=0.107;AN=56;BaseQRankSum=3.309;DP=502;FS=4.667;HRun=0;HaplotypeScore=111.4532;InbreedingCoeff=-0.1539;MQ=49.97;MQ0=24;MQRankSum=-1.820;QD=4.93;ReadPosRankSum=-0.281;VQSLOD=2.6510;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:90.84:0,91,1187	0/1:9,1:10:89.67:250,0,90	0/0:13,0:1:3.01:0,3,47	0/0:42,0:10:24.03:0,24,333	0/0:7,0:6:5.68:0,6,82	0/0:17,0:17:20.73:0,21,192	0/0:20,0:18:31.39:0,31,451	0/0:17,0:16:8.91:0,9,344	0/0:21,0:21:49.30:0,49,597	0/1:20,0:18:25.42:25,0,452	0/1:8,0:8:8.72:9,0,133	0/0:20,0:20:39.05:0,39,567	0/0:12,0:11:2.08:0,2,107	0/0:14,0:14:23.06:0,23,217	0/1:23,1:24:99:148,0,305	0/0:24,0:23:32.96:0,33,425	0/1:10,7:14:90.19:90,0,142	0/0:15,0:15:17.72:0,18,185	0/0:13,0:10:25.81:0,26,302	0/0:16,0:15:14.32:0,14,141	0/0:31,0:27:39.33:0,39,574	0/0:7,0:7:5.38:0,5,43	0/0:8,0:8:8.57:0,9,107	0/0:24,0:24:20.43:0,20,211	0/1:12,0:10:46.37:46,0,119	0/0:14,0:14:24.71:0,25,303	0/0:23,0:23:38.55:0,39,402	0/0:10,0:9:8.85:0,9,72
chr10	90840546	.	A	AAG	1492.10	PASS	AB=0.976;AC=11;AF=0.196;AN=56;BaseQRankSum=1.074;DP=508;FS=7.944;HRun=0;HaplotypeScore=108.3421;InbreedingCoeff=-0.2545;MQ=47.14;MQ0=25;MQRankSum=0.269;QD=8.07;ReadPosRankSum=-0.669;VQSLOD=2.7194;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:87.85:0,88,1211	0/0:12,0:12:35.52:0,36,335	0/0:18,0:3:6.02:0,6,92	0/0:46,0:7:18.06:0,18,274	0/1:7,0:6:45.76:46,0,67	0/1:17,0:17:38.41:79,0,38	0/1:19,0:17:99:291,0,289	0/1:17,0:16:99:348,0,140	0/1:21,0:21:99:307,0,300	0/0:22,0:19:54.58:0,55,704	0/0:9,0:9:20.85:0,21,239	0/0:19,0:19:36.04:0,36,514	0/0:13,0:12:13.25:0,13,193	0/0:14,0:14:23.78:0,24,226	0/0:24,0:24:56.11:0,56,544	0/0:22,0:21:38.43:0,38,365	0/0:17,0:14:23.94:0,24,248	0/0:15,0:15:20.77:0,21,249	0/1:11,0:8:94.11:94,0,104	0/1:16,0:15:51.17:137,0,51	0/1:23,13:32:6.38:6,0,344	0/0:9,0:9:9.01:0,9,94	0/1:6,0:6:58.05:65,0,58	0/0:22,0:22:17.28:0,17,172	0/0:11,0:10:14.78:0,15,170	0/1:14,0:14:99:255,0,105	0/1:21,0:21:9.23:9,0,200	0/0:9,0:8:5.84:0,6,43
chr10	90840804	.	ACC	A	1930.12	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.386;DP=432;FS=1.207;HRun=4;HaplotypeScore=55.1123;InbreedingCoeff=0.9324;MQ=62.90;MQ0=2;MQRankSum=-1.280;QD=37.12;ReadPosRankSum=2.659;VQSLOD=2.9484;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,138,2506	1/1:0,10:10:27.09:394,27,0	0/0:11,0:9:24.08:0,24,418	0/0:15,0:12:24.05:0,24,374	0/0:15,0:15:39.12:0,39,699	0/0:11,0:11:33.05:0,33,547	0/0:18,0:18:48.11:0,48,820	0/0:20,0:20:51.17:0,51,954	0/0:9,0:9:27.09:0,27,505	0/0:14,0:14:42.14:0,42,779	0/0:10,0:10:24.08:0,24,447	0/0:11,0:11:33.11:0,33,609	0/0:9,0:9:27.08:0,27,473	0/0:8,0:8:24.08:0,24,449	1/1:1,9:9:20.65:309,21,0	0/0:13,0:13:39.13:0,39,703	1/1:0,32:32:93.31:1368,93,0	0/0:27,0:27:75.20:0,75,1307	0/0:14,0:12:30.10:0,30,533	0/0:11,0:11:27.09:0,27,503	0/0:29,0:29:81.28:0,81,1498	0/0:2,0:2:3.01:0,3,46	0/0:9,0:9:27.08:0,27,472	0/0:24,0:24:66.22:0,66,1186	0/0:8,0:8:24.08:0,24,449	0/0:23,0:23:66.23:0,66,1228	0/0:12,0:12:36.10:0,36,600	0/0:7,0:7:21.07:0,21,393
chr10	90840914	.	CAAA	C	818.88	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=1.831;DP=465;FS=10.169;HRun=16;HaplotypeScore=82.1059;InbreedingCoeff=0.6986;MQ=44.47;MQ0=15;MQRankSum=2.763;QD=10.50;ReadPosRankSum=4.586;VQSLOD=-0.2345;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:42:91.42:0,91,1398	1/1:3,5:8:14.94:147,15,0	0/0:10,0:2:5.80:0,6,40	0/1:15,0:6:2.05:2,0,75	0/0:19,0:17:40.16:0,40,496	0/0:27,0:24:35.27:0,35,535	0/0:17,0:13:24.14:0,24,341	0/0:21,0:17:29.34:0,29,441	0/0:9,0:9:18.52:0,19,219	0/0:25,0:24:49.58:0,50,580	0/0:13,0:11:18.74:0,19,191	0/0:12,0:12:23.56:0,24,318	0/0:12,0:11:21.04:0,21,306	0/0:8,0:8:1.34:0,1,177	1/1:0,12:15:35.77:343,36,0	0/0:15,0:14:19.20:0,19,199	1/1:13,21:36:45.43:466,45,0	0/0:10,0:9:14.41:0,14,194	0/0:15,0:13:24.41:0,24,263	0/0:15,0:14:30.66:0,31,372	0/0:11,0:7:6.02:0,6,84	0/0:15,0:16:27.90:0,28,368	0/0:13,0:12:24.98:0,25,315	0/0:12,0:9:3.23:0,3,37	0/0:18,0:14:22.58:0,23,282	0/0:17,0:17:35.87:0,36,393	0/0:12,0:8:7.32:0,7,75	0/0:17,0:17:24.46:0,24,334
chr10	90841573	.	GC	G	7955.37	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-4.145;DP=626;FS=3.991;HRun=8;HaplotypeScore=94.5137;InbreedingCoeff=0.9886;MQ=85.88;MQ0=0;MQRankSum=-3.998;QD=20.77;ReadPosRankSum=2.601;VQSLOD=4.8507;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,102,1208	1/1:1,0:5:8.15:24,8,0	0/0:18,0:18:41.96:0,42,443	0/0:25,0:25:29.38:0,29,439	1/1:1,13:14:36.05:348,36,0	1/1:2,27:29:72.11:695,72,0	1/1:2,21:23:63.10:608,63,0	1/1:3,20:23:57.08:550,57,0	1/1:3,17:20:48.07:463,48,0	0/0:1,0:11:28.93:0,29,156	0/0:1,0:13:20.13:0,20,103	0/0:9,0:20:34.25:0,34,172	0/0:3,0:25:51.80:0,52,272	0/0:5,0:20:31.63:0,32,161	1/1:2,0:30:50.93:150,51,0	0/0:2,0:20:48.88:0,49,249	1/1:1,0:39:73.33:216,73,0	0/0:2,0:19:39.33:0,39,213	1/1:2,20:22:51.64:542,52,0	1/1:1,17:18:45.06:435,45,0	1/1:4,36:40:99:1014,105,0	0/0:3,0:14:34.50:0,35,176	1/1:1,16:17:42.06:406,42,0	1/1:2,35:37:96.15:927,96,0	0/0:3,0:17:25.84:0,26,131	1/1:3,21:26:51.35:593,51,0	1/1:1,28:29:81.13:782,81,0	1/1:0,11:11:21.03:203,21,0
chr10	90842055	.	GC	G	2683.10	PASS	AB=0.909;AC=28;AF=0.500;AN=56;BaseQRankSum=-3.950;DP=347;FS=2.462;HRun=11;HaplotypeScore=54.1489;InbreedingCoeff=0.7600;MQ=70.02;MQ0=2;MQRankSum=1.523;QD=12.60;ReadPosRankSum=1.015;VQSLOD=3.3795;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:21.05:0,21,224	0/0:1,0:1:3.01:0,3,32	0/0:21,0:14:14.56:0,15,133	0/1:18,0:12:12.08:12,0,22	1/1:4,7:12:26:202,26,0	1/1:3,14:17:38.94:320,39,0	1/1:4,13:19:37.03:283,37,0	1/1:6,6:13:8.95:74,9,0	1/1:6,6:13:25.48:185,25,0	0/1:6,2:9:11.62:12,0,62	0/0:2,0:4:3.31:0,3,16	0/0:7,0:10:18.70:0,19,113	0/0:9,0:12:15.48:0,15,104	0/0:4,0:5:8.81:0,9,54	0/0:8,0:8:18.02:0,18,178	0/0:4,0:8:17.85:0,18,122	0/0:27,1:28:44.47:0,44,657	0/0:6,0:10:23.52:0,24,190	1/1:4,8:12:26.01:203,26,0	1/1:6,6:13:29:227,29,0	1/1:2,13:16:31.95:252,32,0	0/0:2,0:5:3.31:0,3,15	1/1:2,7:11:22.04:160,22,0	1/1:5,14:19:15.64:272,16,0	0/0:5,0:9:14.69:0,15,112	1/1:4,8:13:9.40:154,9,0	1/1:1,14:15:38.94:320,39,0	1/1:2,10:12:26.95:222,27,0
chr10	90842793	.	G	GTATC	17181.56	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-12.706;DP=659;FS=11.615;HRun=0;HaplotypeScore=86.7792;InbreedingCoeff=0.9596;MQ=64.34;MQ0=2;MQRankSum=0.634;QD=34.99;ReadPosRankSum=2.968;VQSLOD=3.9821;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:52:99:0,141,2137	0/0:15,0:15:45.14:0,45,749	0/0:28,0:22:47.31:0,47,639	0/0:21,0:20:34.66:0,35,512	1/1:2,25:27:63.21:1375,63,0	1/1:0,22:22:30.10:744,30,0	1/1:3,18:22:21.06:539,21,0	1/1:6,22:28:63.12:1005,63,0	1/1:3,14:18:15.05:385,15,0	1/1:3,29:32:84.19:1547,84,0	1/1:0,18:18:33.11:646,33,0	1/1:5,13:20:10.85:306,11,0	1/1:0,24:24:39.12:999,39,0	1/1:0,13:13:21.07:530,21,0	0/0:30,0:30:78.24:0,78,1269	1/1:0,15:15:9.03:231,9,0	0/0:21,0:21:36.68:0,37,830	1/1:2,18:21:27.09:657,27,0	1/1:9,12:21:40.88:747,41,0	1/1:1,15:18:39.02:858,39,0	1/1:4,32:36:42.14:1077,42,0	1/1:1,10:13:15.05:364,15,0	1/1:3,20:24:30.10:769,30,0	1/1:2,19:21:21.07:539,21,0	1/1:2,24:26:45.15:1153,45,0	1/1:2,33:37:99:1883,102,0	1/1:4,16:21:27.06:597,27,0	1/1:0,12:12:9.03:231,9,0
chr10	90843795	.	GGCAGT	G	10054.77	PASS	AC=44;AF=0.815;AN=54;BaseQRankSum=9.360;DP=371;FS=1.597;HRun=0;HaplotypeScore=121.0252;InbreedingCoeff=0.8804;MQ=41.18;MQ0=44;MQRankSum=-8.860;QD=40.38;ReadPosRankSum=-4.040;VQSLOD=4.2109;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:25:45.15:0,45,1362	0/0:3,0:3:9.03:0,9,274	0/0:17,0:3:6.02:0,6,106	./.	1/1:10,5:15:42.14:831,42,0	1/1:8,1:7:12.04:244,12,0	1/1:8,6:14:30.10:613,30,0	1/1:2,11:12:30.06:572,30,0	1/1:7,2:9:21.03:385,21,0	1/1:8,4:11:27.09:552,27,0	1/1:6,3:9:15.05:263,15,0	1/1:2,5:7:21.07:430,21,0	1/1:6,6:11:24.08:490,24,0	1/1:10,3:12:33.11:673,33,0	0/0:20,0:17:18.06:0,18,532	1/1:11,2:12:30.10:612,30,0	0/0:37,0:33:54.66:0,55,1609	1/1:4,2:5:6.02:123,6,0	1/1:2,2:3:6.02:123,6,0	1/1:9,7:16:42.14:857,42,0	1/1:12,7:19:18.06:367,18,0	1/1:6,4:9:24.08:488,24,0	1/1:7,4:11:18.53:368,19,0	1/1:5,14:18:15.19:307,15,0	1/1:13,4:17:39.13:777,39,0	1/1:6,1:7:12.04:245,12,0	1/1:3,4:7:21.07:429,21,0	1/1:6,1:7:15.05:307,15,0
chr10	90843801	.	G	GACT	6010.61	PASS	AB=0.773;AC=29;AF=0.537;AN=54;BaseQRankSum=7.737;DP=355;FS=1.248;HRun=0;HaplotypeScore=141.6849;InbreedingCoeff=0.0928;MQ=39.23;MQ0=45;MQRankSum=-6.687;QD=26.13;ReadPosRankSum=0.291;VQSLOD=5.0961;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:26:44.91:0,45,839	0/0:3,0:3:9.03:0,9,167	0/0:17,0:3:6.02:0,6,76	./.	1/1:6,10:16:22.48:569,22,0	1/1:1,5:5:12.04:226,12,0	0/1:10,4:13:4.14:319,0,4	0/1:12,0:12:51.47:51,0,120	1/1:4,4:7:19.55:272,20,0	0/1:6,6:11:11.74:307,0,12	1/1:6,3:9:17.32:261,17,0	0/1:7,2:9:29.17:223,0,29	0/1:6,4:9:13.43:248,0,13	1/1:3,9:11:33.06:555,33,0	0/0:20,0:17:18.06:0,18,335	1/1:3,9:11:14.10:465,14,0	0/0:34,0:30:54.19:0,54,1007	0/1:5,1:5:22.39:72,0,22	0/0:3,0:3:4.17:0,4,34	0/1:9,7:16:3.23:456,0,3	1/1:11,2:14:12.30:327,12,0	0/1:6,5:10:11.05:258,0,11	0/1:5,2:7:1.29:168,0,1	0/1:16,1:17:20.95:127,0,21	0/1:6,8:16:13.37:473,0,13	0/1:2,2:4:6.66:149,0,7	0/1:7,3:8:0.93:232,0,1	1/1:4,4:8:13.91:251,14,0
chr10	90843804	.	G	GGGT	2269.89	PASS	AB=0.732;AC=21;AF=0.389;AN=54;BaseQRankSum=11.897;DP=359;FS=1.192;HRun=0;HaplotypeScore=155.3001;InbreedingCoeff=-0.4551;MQ=39.14;MQ0=44;MQRankSum=-5.052;QD=10.36;ReadPosRankSum=7.042;VQSLOD=2.5713;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:27:45:0,45,807	0/0:3,0:3:9.03:0,9,167	0/0:18,0:3:3.01:0,3,55	./.	0/1:7,10:17:32.12:246,0,32	1/1:2,4:5:12.03:132,12,0	0/1:10,4:13:81.72:104,0,82	0/0:14,0:14:29.67:0,30,241	0/1:3,4:6:6.50:113,0,7	0/1:6,6:11:62.87:151,0,63	0/1:7,2:9:33.55:53,0,34	0/1:7,2:9:42.91:43,0,90	0/1:6,4:9:49.77:113,0,50	0/1:3,9:11:3.73:241,0,4	0/0:20,0:17:18.06:0,18,334	0/1:3,9:11:14.16:230,0,14	0/0:34,0:30:54.17:0,54,974	0/1:5,0:5:10.81:11,0,134	0/0:3,0:3:9:0,9,102	0/1:9,7:16:89.87:216,0,90	0/1:12,2:14:44.05:77,0,44	0/1:9,4:12:51.14:118,0,51	0/1:5,2:7:43.63:52,0,44	0/1:18,1:18:27.14:27,0,65	0/1:8,8:16:80.15:186,0,80	0/1:1,3:4:12.60:92,0,13	0/1:7,3:8:28.59:117,0,29	0/1:3,4:7:21.53:106,0,22
chr10	90843815	.	T	TGG	4139.85	PASS	AB=0.738;AC=25;AF=0.463;AN=54;BaseQRankSum=11.461;DP=368;FS=1.943;HRun=3;HaplotypeScore=142.1603;InbreedingCoeff=-0.1788;MQ=38.02;MQ0=55;MQRankSum=-4.531;QD=18.40;ReadPosRankSum=6.769;VQSLOD=0.9649;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:25:39.10:0,39,587	0/0:2,0:2:6.02:0,6,98	0/0:18,0:3:6.02:0,6,88	./.	0/1:7,10:17:35.86:339,0,36	1/1:1,7:8:15.05:216,15,0	0/1:11,4:13:16.52:206,0,17	0/0:14,0:13:0.24:0,0,360	0/1:4,4:6:4.94:161,0,5	0/1:6,6:11:99:180,0,137	1/1:5,3:8:18.02:283,18,0	0/1:7,2:9:77.70:78,0,127	0/1:5,4:8:79.47:146,0,79	1/1:2,11:12:24.08:352,24,0	0/0:20,0:17:15.05:0,15,244	0/1:3,9:11:19.70:297,0,20	0/0:36,0:30:50.95:0,51,831	0/0:6,0:5:4.55:0,5,95	0/1:5,0:5:8.27:8,0,134	0/1:10,7:17:80.49:336,0,80	1/1:11,3:11:11.80:194,12,0	0/1:9,4:12:85.21:216,0,85	0/1:6,2:8:40.04:77,0,40	0/1:15,3:16:37.28:145,0,37	0/1:8,8:16:82.33:316,0,82	0/1:3,3:6:30.79:181,0,31	0/1:7,3:8:47.72:201,0,48	1/1:2,4:6:17.27:208,17,0
chr10	90843816	.	T	TGCTGAGGGTGGG	27841.57	PASS	AC=44;AF=0.815;AN=54;BaseQRankSum=5.774;DP=439;FS=6.805;HRun=0;HaplotypeScore=152.3286;InbreedingCoeff=0.8818;MQ=36.67;MQ0=57;MQRankSum=-7.241;QD=87.83;ReadPosRankSum=2.224;VQSLOD=4.5210;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:25:24.08:0,24,510	0/0:2,0:2:6.02:0,6,218	0/0:18,0:3:3.01:0,3,52	./.	1/1:17,2:19:30.10:1674,30,0	1/1:10,0:8:15.05:797,15,0	1/1:14,3:16:30.10:1760,30,0	1/1:17,3:19:48.16:2118,48,0	1/1:13,1:12:21.07:1117,21,0	1/1:15,1:14:39.09:1737,39,0	1/1:5,3:8:18.06:917,18,0	1/1:12,2:16:33.11:1448,33,0	1/1:15,0:12:36.08:1678,36,0	1/1:14,0:13:30.10:1804,30,0	0/0:20,0:17:18.02:0,18,528	1/1:16,1:14:36.12:2008,36,0	0/0:35,0:29:44.78:0,45,1120	1/1:6,1:5:9.01:358,9,0	1/1:5,0:5:12:217,12,0	1/1:18,2:20:33.11:1733,33,0	1/1:11,3:11:11.79:619,12,0	1/1:13,2:16:21.07:1151,21,0	1/1:11,0:11:12.04:580,12,0	1/1:18,2:16:17.90:949,18,0	1/1:14,2:17:27.09:1551,27,0	1/1:14,0:13:36.12:1488,36,0	1/1:8,3:11:21.05:1082,21,0	1/1:4,2:6:18.06:1054,18,0
chr10	90844468	.	C	CT	2158.01	PASS	AC=26;AF=0.500;AN=52;BaseQRankSum=-1.003;DP=426;FS=2.279;HRun=8;HaplotypeScore=64.2846;InbreedingCoeff=0.8957;MQ=36.67;MQ0=55;MQRankSum=-1.914;QD=10.90;ReadPosRankSum=-1.003;VQSLOD=2.2522;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:38:35.74:0,36,328	0/0:2,0:2:2.95:0,3,19	./.	./.	1/1:6,5:8:6.02:69,6,0	1/1:10,9:17:27.08:309,27,0	1/1:11,6:11:12.04:139,12,0	1/1:11,3:11:12.51:140,13,0	1/1:5,4:7:9.03:104,9,0	0/0:15,0:15:20.99:0,21,192	0/0:14,0:11:21:0,21,192	0/0:17,0:14:27.01:0,27,247	0/0:14,0:12:24.01:0,24,218	0/0:15,0:12:8.86:0,9,81	0/0:14,0:14:20.77:0,21,188	0/0:9,0:9:15.20:0,15,156	0/0:30,0:25:17.23:0,17,164	0/0:17,0:14:20.77:0,21,191	1/1:12,6:12:15.04:173,15,0	1/1:15,5:18:16.52:147,17,0	1/1:5,6:9:6.02:69,6,0	0/0:14,0:14:23.93:0,24,215	1/1:8,14:22:42.07:455,42,0	1/1:11,9:14:18.05:208,18,0	0/0:15,0:15:26.98:0,27,246	1/1:8,8:14:24.54:278,25,0	1/1:8,4:9:12.04:139,12,0	1/1:6,3:7:12.04:138,12,0
chr10	90844626	.	TTTTG	T	7713.95	PASS	AB=0.737;AC=26;AF=0.464;AN=56;BaseQRankSum=-2.827;DP=494;FS=1.724;HRun=0;HaplotypeScore=95.9563;InbreedingCoeff=0.8352;MQ=63.00;MQ0=1;MQRankSum=-2.063;QD=34.59;ReadPosRankSum=2.753;VQSLOD=5.0357;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,102,2310	0/0:9,0:9:24.08:0,24,599	0/0:19,0:16:26.98:0,27,587	0/0:19,0:15:11.70:0,12,568	1/1:1,22:23:60.16:1006,60,0	1/1:0,16:16:45.15:778,45,0	1/1:1,13:14:27.09:463,27,0	1/1:6,10:16:30.04:408,30,0	1/1:2,13:15:33.11:571,33,0	0/0:20,0:20:51.17:0,51,1256	0/0:20,0:20:48.13:0,48,1045	0/0:11,0:11:30.10:0,30,744	0/0:16,0:15:39.13:0,39,956	0/0:9,0:9:27.07:0,27,573	0/0:15,0:15:36.11:0,36,820	0/1:11,1:12:21.72:22,0,644	0/0:32,0:32:72.25:0,72,1693	0/0:22,0:21:57.20:0,57,1409	1/1:8,10:18:27.05:409,27,0	1/1:3,14:17:39.10:642,39,0	1/1:3,7:10:15.05:260,15,0	0/0:19,0:19:51.16:0,51,1165	1/1:3,20:23:51.10:881,51,0	1/1:0,19:19:45.15:778,45,0	0/0:21,0:21:48.10:0,48,1021	0/1:4,18:22:20.74:823,0,21	1/1:2,11:13:33.11:569,33,0	1/1:3,2:5:6.02:104,6,0
chr10	90844759	.	AAG	A	206.80	PASS	AB=0.923;AC=12;AF=0.316;AN=38;BaseQRankSum=3.465;DP=504;FS=15.751;HRun=0;HaplotypeScore=58.8678;InbreedingCoeff=0.3977;MQ=53.84;MQ0=46;MQRankSum=1.254;QD=1.70;ReadPosRankSum=-0.286;VQSLOD=0.0292;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:28:8.52:42,9,0	./.	./.	./.	0/0:15,0:15:3.01:0,3,41	1/1:18,2:19:6.90:66,7,0	1/1:13,3:16:6.01:62,6,0	./.	0/1:11,1:12:19.93:20,0,72	0/0:16,0:13:3.01:0,3,42	./.	0/0:13,0:11:3:0,3,25	1/1:14,3:16:9.02:96,9,0	0/0:10,0:9:5.51:0,6,51	0/0:17,0:16:5.81:0,6,88	1/1:13,0:12:3:27,3,0	0/0:16,0:15:9:0,9,89	0/1:11,1:11:25.88:26,0,38	0/0:10,0:9:6.02:0,6,79	./.	0/0:19,0:15:12.02:0,12,138	./.	./.	0/0:27,0:29:26.25:0,26,285	./.	0/0:14,0:14:5.63:0,6,58	0/0:21,0:20:6.01:0,6,68	0/0:22,0:19:11.05:0,11,107
chr10	90845019	.	T	TCC	2167.90	PASS	AC=18;AF=0.333;AN=54;BaseQRankSum=-6.070;DP=454;FS=1.275;HRun=5;HaplotypeScore=63.7773;InbreedingCoeff=0.9070;MQ=44.81;MQ0=51;MQRankSum=-2.392;QD=20.45;ReadPosRankSum=0.118;VQSLOD=0.5838;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:30.07:0,30,351	0/0:5,0:5:9:0,9,98	./.	0/0:46,0:3:3.01:0,3,33	0/0:20,0:19:36.08:0,36,455	0/0:8,0:8:12.03:0,12,153	0/0:16,0:15:36.11:0,36,458	0/0:21,0:20:51.14:0,51,642	0/0:10,0:10:24:0,24,259	1/1:5,8:13:30.09:467,30,0	1/1:4,7:12:14.41:188,14,0	1/1:3,7:9:18.06:310,18,0	1/1:6,6:12:13.29:211,13,0	1/1:1,9:10:15.52:261,16,0	0/0:9,0:9:12.04:0,12,152	1/1:0,6:6:15.05:260,15,0	0/0:23,0:22:36.11:0,36,454	1/1:7,9:17:15.72:262,16,0	0/0:12,0:12:36.11:0,36,454	0/0:11,0:11:21.05:0,21,254	0/0:8,0:8:21.03:0,21,238	1/1:3,3:6:3.01:49,3,0	0/0:11,0:11:21.07:0,21,267	0/0:20,0:19:27.09:0,27,344	1/1:3,15:18:21.07:361,21,0	0/0:14,0:14:25.25:0,25,432	0/0:24,0:23:51.16:0,51,646	0/0:23,0:17:33.09:0,33,420
chr10	90846875	.	GC	G	3900.48	PASS	AB=0.890;AC=47;AF=0.839;AN=56;BaseQRankSum=6.412;DP=535;FS=7.586;HRun=11;HaplotypeScore=72.7612;InbreedingCoeff=0.4518;MQ=66.59;MQ0=1;MQRankSum=0.623;QD=8.23;ReadPosRankSum=5.217;VQSLOD=1.9619;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,3:37:9.33:0,9,636	0/1:8,0:8:2.48:2,0,142	0/1:11,1:12:39.47:39,0,70	0/1:10,0:10:4.09:4,0,57	1/1:2,16:21:27.08:215,27,0	1/1:7,12:20:7.77:203,8,0	1/1:9,20:31:46:357,46,0	1/1:15,5:20:8.87:74,9,0	1/1:6,18:24:33.50:355,33,0	1/1:3,0:21:32.58:94,33,0	1/1:0,0:12:22.41:65,22,0	1/1:4,0:30:44.81:129,45,0	1/1:3,0:17:22.02:64,22,0	1/1:2,0:12:16.28:47,16,0	0/0:21,1:24:20.12:0,20,359	1/1:6,1:26:37.62:125,38,0	0/1:20,4:25:68.44:68,0,336	1/1:1,0:15:26.48:76,26,0	1/1:8,11:19:0.93:214,1,0	1/1:4,5:9:16.99:127,17,0	1/1:5,15:20:35.70:295,36,0	1/1:1,1:17:27.44:95,27,0	0/1:4,4:8:0.01:0,0,0	1/1:5,28:34:70.93:572,71,0	1/1:3,0:18:26.47:77,26,0	1/1:5,6:11:17.96:148,18,0	1/1:3,15:20:43.02:332,43,0	1/1:6,7:13:14.97:123,15,0
chr10	90847029	.	T	TC	8568.65	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-13.374;DP=666;FS=0.000;HRun=1;HaplotypeScore=64.1175;InbreedingCoeff=0.9998;MQ=70.49;MQ0=0;MQRankSum=-0.418;QD=37.09;ReadPosRankSum=3.757;VQSLOD=5.2615;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.16:0,75,922	0/0:10,0:10:27.09:0,27,350	0/0:20,0:17:37.54:0,38,410	0/0:25,0:21:40.07:0,40,512	0/0:26,0:26:78.25:0,78,998	0/0:22,0:22:66.19:0,66,828	0/0:21,0:21:63.20:0,63,803	0/0:32,0:31:84.25:0,84,1045	0/0:21,0:21:63.18:0,63,788	1/1:0,35:35:99:1467,105,0	1/1:3,19:22:63.05:847,63,0	1/1:1,23:24:54.18:797,54,0	1/1:1,26:27:54.18:794,54,0	1/1:2,19:21:51.17:754,51,0	0/0:19,0:19:57.17:0,57,716	1/1:0,33:33:90.30:1330,90,0	0/0:24,0:24:72.20:0,72,903	1/1:1,26:27:66.22:976,66,0	0/0:14,0:14:36.10:0,36,441	0/0:25,0:25:75.20:0,75,929	0/0:31,0:31:90.25:0,90,1135	1/1:2,21:23:65.88:852,66,0	0/0:29,0:29:87.26:0,87,1109	0/0:14,0:14:42.09:0,42,501	1/1:0,19:19:51.17:751,51,0	0/0:26,0:26:75.23:0,75,943	0/0:29,0:29:84.20:0,84,998	0/0:21,0:21:63.20:0,63,816
chr10	90847580	.	A	ACG	1251.03	PASS	AB=0.759;AC=10;AF=0.179;AN=56;BaseQRankSum=9.113;DP=698;FS=20.122;HRun=0;HaplotypeScore=159.3861;InbreedingCoeff=0.0201;MQ=56.76;MQ0=6;MQRankSum=-7.715;QD=6.69;ReadPosRankSum=4.033;VQSLOD=1.9380;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,2017	0/0:4,0:4:12.04:0,12,184	0/0:37,0:23:65.54:0,66,890	0/0:51,0:26:48.40:0,48,703	0/0:27,0:27:81.26:0,81,1215	0/0:17,0:17:48.13:0,48,687	0/0:27,0:27:78.18:0,78,1138	0/0:26,0:26:72.22:0,72,1021	0/0:25,0:25:75.21:0,75,1076	0/1:21,5:25:99:136,0,214	0/1:12,3:14:11.70:77,0,12	0/1:20,13:33:23.76:306,0,24	0/1:11,8:19:45.21:192,0,45	0/1:19,9:28:73.53:188,0,74	0/0:20,0:20:60.17:0,60,871	0/1:8,7:15:34.89:165,0,35	0/0:39,0:39:99:0,111,1571	0/1:14,5:19:52.10:52,0,148	0/0:11,0:11:33.09:0,33,467	0/0:21,0:21:60.18:0,60,870	0/0:44,0:44:99:0,123,1793	1/1:8,3:11:10.33:113,10,0	0/0:16,0:16:48.15:0,48,703	0/0:29,0:29:87.22:0,87,1236	0/1:14,7:21:33.97:170,0,34	0/0:24,0:24:69.21:0,69,996	0/0:24,0:23:69.19:0,69,1008	0/0:22,0:22:63.21:0,63,962
chr10	90847582	.	A	ACGCACG	4535.90	PASS	AB=0.745;AC=11;AF=0.196;AN=56;BaseQRankSum=13.700;DP=688;FS=19.066;HRun=0;HaplotypeScore=195.8961;InbreedingCoeff=0.3388;MQ=57.00;MQ0=6;MQRankSum=-7.756;QD=24.79;ReadPosRankSum=1.926;VQSLOD=3.4093;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,2895	0/0:4,0:4:12.04:0,12,295	0/0:39,0:25:65.02:0,65,1085	0/0:48,0:27:39.75:0,40,977	0/0:27,0:27:81.26:0,81,1862	0/0:15,0:15:45.12:0,45,1007	0/0:26,0:26:75.23:0,75,1659	0/0:26,0:26:69.19:0,69,1330	0/0:25,0:25:72.20:0,72,1562	0/1:21,5:25:83.09:564,0,83	1/1:11,3:13:13.94:221,14,0	0/1:20,13:33:26.05:965,0,26	0/1:12,8:20:3.43:515,0,3	1/1:20,9:29:41.56:729,42,0	0/0:20,0:20:60.16:0,60,1320	0/1:8,7:15:11.17:495,0,11	0/0:38,0:38:99:0,105,2267	0/1:12,5:17:39.13:300,0,39	0/0:11,0:11:30.09:0,30,686	0/0:21,0:21:60.15:0,60,1222	0/0:42,0:42:99:0,117,2606	0/1:6,3:9:5.06:207,0,5	0/0:17,0:17:45.15:0,45,1033	0/0:28,0:28:81.20:0,81,1720	0/1:13,7:20:4.27:538,0,4	0/0:24,0:24:69.20:0,69,1488	0/0:25,0:24:69.21:0,69,1534	0/0:21,0:21:63.22:0,63,1538
chr10	90847591	.	CAT	C	205.27	PASS	AB=0.804;AC=5;AF=0.089;AN=56;BaseQRankSum=4.299;DP=661;FS=1.142;HRun=0;HaplotypeScore=160.8706;InbreedingCoeff=-0.0911;MQ=63.55;MQ0=4;MQRankSum=-4.169;QD=2.07;ReadPosRankSum=-3.291;VQSLOD=1.9585;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,2397	0/0:5,0:5:15.05:0,15,270	0/0:37,0:28:78.20:0,78,1284	0/0:41,0:25:64.23:0,64,1022	0/0:27,0:27:78.25:0,78,1469	0/0:17,0:17:51.14:0,51,890	0/0:24,0:24:66.17:0,66,1140	0/0:28,0:28:81.26:0,81,1484	0/0:21,0:21:63.22:0,63,1205	0/1:17,5:21:99:166,0,548	0/0:10,2:11:12.01:0,12,181	0/1:27,5:32:58.82:59,0,477	0/1:12,6:18:56.20:56,0,305	0/0:20,6:26:42.12:0,42,610	0/0:22,0:22:66.23:0,66,1246	0/0:15,1:16:32.82:0,33,434	0/0:39,0:39:99:0,111,2060	0/0:16,0:16:36.09:0,36,598	0/0:10,0:10:30.10:0,30,570	0/0:18,0:18:54.17:0,54,1007	0/0:36,0:36:99:0,102,1958	0/1:6,2:8:32.81:33,0,58	0/0:16,0:16:45.12:0,45,832	0/0:28,0:28:81.24:0,81,1493	0/1:14,5:19:1.49:1,0,360	0/0:27,0:27:81.26:0,81,1522	0/0:24,0:23:66.23:0,66,1218	0/0:28,0:28:84.16:0,84,1336
chr10	90847773	.	AAACC	A	4310.16	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.640;DP=488;FS=26.226;HRun=0;HaplotypeScore=71.3338;InbreedingCoeff=0.9610;MQ=54.57;MQ0=23;MQRankSum=-1.385;QD=38.48;ReadPosRankSum=2.828;VQSLOD=3.1606;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:81.24:0,81,1858	0/0:6,0:6:15.05:0,15,369	0/0:28,0:8:24.08:0,24,574	0/0:18,0:4:12.04:0,12,246	0/0:15,0:15:42.13:0,42,978	0/0:15,0:15:36.12:0,36,858	0/0:15,0:15:33.11:0,33,809	0/0:20,0:17:36.11:0,36,805	0/0:10,0:10:27.08:0,27,616	1/1:0,7:7:21.05:320,21,0	1/1:2,8:10:20.92:273,21,0	1/1:3,15:18:45.15:747,45,0	1/1:0,12:12:36.12:597,36,0	1/1:1,8:9:21.07:347,21,0	0/0:14,0:14:36.08:0,36,739	1/1:2,9:11:27.09:448,27,0	0/0:37,0:37:93.32:0,93,2227	1/1:3,25:28:63.21:1045,63,0	0/0:39,0:38:90.30:0,90,2077	0/0:12,0:12:24.08:0,24,590	0/0:16,0:16:39.11:0,39,862	1/1:0,2:2:3.01:50,3,0	0/0:13,0:13:30.09:0,30,686	0/0:24,0:24:48.12:0,48,1127	1/1:3,12:15:32.98:484,33,0	0/0:24,1:24:19.46:0,19,1568	0/0:15,0:15:32.96:0,33,689	0/0:18,0:18:54.19:0,54,1328
chr10	90849851	.	TTGTA	T	8459.96	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=2.806;DP=731;FS=4.662;HRun=0;HaplotypeScore=157.6832;InbreedingCoeff=0.9578;MQ=56.75;MQ0=5;MQRankSum=3.779;QD=25.56;ReadPosRankSum=1.121;VQSLOD=4.7634;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:93.27:0,93,2100	0/0:8,0:8:9.03:0,9,190	0/0:24,0:18:24.08:0,24,551	0/0:16,0:13:18.05:0,18,321	1/1:12,14:26:42.14:679,42,0	1/1:6,13:19:30.10:485,30,0	1/1:15,18:34:51.17:804,51,0	1/1:24,14:38:42.08:555,42,0	1/1:7,16:23:45.15:727,45,0	0/0:18,0:34:49.19:0,49,743	0/0:10,0:16:3.62:0,4,66	0/0:11,0:27:15.05:0,15,261	0/0:4,0:18:18.06:0,18,312	0/0:12,0:31:33.11:0,33,565	0/0:35,0:35:81.28:0,81,1933	0/0:13,0:32:45.13:0,45,730	0/0:35,0:35:90.23:0,90,1993	0/0:14,0:26:15.05:0,15,229	1/1:13,9:22:30.05:410,30,0	1/1:5,14:19:33.11:513,33,0	1/1:6,21:27:51.17:824,51,0	0/0:9,0:18:12.04:0,12,206	1/1:5,11:14:27.09:436,27,0	1/1:7,17:24:45.15:727,45,0	0/0:14,0:34:36.12:0,36,624	1/1:17,22:39:60.18:944,60,0	1/1:7,27:34:66.23:1066,66,0	1/1:1,8:9:18.06:291,18,0
chr10	90850120	.	G	GCT	1219.61	PASS	AB=0.946;AC=19;AF=0.432;AN=44;BaseQRankSum=0.458;DP=506;FS=10.197;HRun=0;HaplotypeScore=109.5977;InbreedingCoeff=0.1235;MQ=65.58;MQ0=10;MQRankSum=0.400;QD=4.23;ReadPosRankSum=-1.959;VQSLOD=1.8567;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:26.78:0,27,196	0/0:5,0:5:5.92:0,6,39	./.	./.	0/1:33,1:34:6.58:258,0,7	0/1:24,0:24:14.71:124,0,15	0/1:16,1:17:30.16:55,0,30	1/1:30,0:30:0.89:2,1,0	0/1:14,10:24:17.49:28,0,17	0/0:10,0:10:12.59:0,13,73	./.	0/0:11,0:12:2.92:0,3,17	0/0:15,0:15:0.47:0,0,1	./.	0/0:12,0:12:5.85:0,6,47	0/0:12,0:12:0.47:0,0,1	0/0:15,0:15:10.62:0,11,56	0/1:12,0:11:12.93:13,0,15	0/1:21,0:19:11.37:11,0,30	1/1:25,0:26:6.88:51,7,0	0/0:20,0:19:2.50:0,2,9	./.	1/1:17,0:17:3.59:125,4,0	0/1:19,0:19:66.75:67,0,86	./.	1/1:21,0:21:21.54:235,22,0	1/1:29,0:29:25.12:368,25,0	1/1:11,3:14:3.44:21,3,0
chr10	90850161	.	CTG	C	1076.97	PASS	AB=0.980;AC=28;AF=0.636;AN=44;BaseQRankSum=-0.430;DP=460;FS=4.174;HRun=0;HaplotypeScore=106.2340;InbreedingCoeff=-0.3818;MQ=40.60;MQ0=40;MQRankSum=-2.567;QD=2.73;ReadPosRankSum=-3.392;VQSLOD=1.1154;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:30:99:133,0,188	1/1:6,0:6:13.15:98,13,0	./.	./.	0/1:27,0:26:70.68:71,0,72	0/1:24,0:23:45.04:50,0,45	0/1:24,0:17:11.37:11,0,86	1/1:24,0:23:1.42:199,1,0	0/0:23,0:20:10.56:0,11,111	0/1:15,0:12:19.86:106,0,20	./.	1/1:11,0:11:7.74:31,8,0	1/1:19,0:15:13.83:61,14,0	./.	0/1:11,0:11:0.24:0,0,87	1/1:11,0:9:2.74:17,3,0	0/1:16,0:15:42.51:43,0,73	0/1:9,0:6:28.19:28,0,29	0/1:8,5:11:44.07:44,0,126	0/1:21,0:21:44:44,0,49	1/1:15,0:13:2.68:11,3,0	./.	0/1:24,0:20:46.06:46,0,51	0/1:21,0:19:6.66:7,0,174	./.	0/1:25,0:24:98.57:106,0,99	0/1:28,0:27:30.49:30,0,200	1/1:16,0:13:10.48:76,10,0
chr10	90850163	.	GTCTCTCTCTCTCTCTC	G	996.47	PASS	AB=0.992;AC=13;AF=0.283;AN=46;BaseQRankSum=-0.557;DP=462;FS=0.000;HRun=0;HaplotypeScore=177.7534;InbreedingCoeff=0.3485;MQ=40.38;MQ0=40;MQRankSum=-7.572;QD=6.92;ReadPosRankSum=-2.485;VQSLOD=1.8826;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:30:53.28:0,53,1893	0/0:7,0:7:11.30:0,11,455	./.	./.	0/0:25,0:24:43.21:0,43,1433	0/0:26,0:24:21.94:0,22,745	0/0:24,0:17:13.76:0,14,583	0/1:28,0:27:99:186,0,359	0/0:22,0:19:15.03:0,15,521	1/1:10,2:12:26.96:575,27,0	./.	1/1:9,0:11:8.84:174,9,0	1/1:15,1:15:9.92:93,10,0	./.	0/0:13,0:13:19.60:0,20,737	1/1:7,2:8:2.30:35,2,0	0/0:16,0:15:32.97:0,33,920	0/1:8,0:6:32.14:32,0,213	0/1:14,0:12:7.23:7,0,709	0/0:21,0:21:28.61:0,29,769	0/0:15,0:13:2.53:0,3,78	0/0:1,1:12:0:0,0,0	0/0:23,0:19:29.12:0,29,798	0/0:21,0:19:21.05:0,21,892	./.	0/1:22,0:22:23.17:23,0,2107	0/0:28,0:27:44.15:0,44,2552	0/1:15,0:12:20.23:20,0,468
chr10	90850169	.	C	CTGTG	125.32	PASS	AB=0.891;AC=8;AF=0.167;AN=48;BaseQRankSum=4.640;DP=443;FS=11.925;HRun=0;HaplotypeScore=114.1048;InbreedingCoeff=0.2667;MQ=40.36;MQ0=40;MQRankSum=-3.758;QD=1.79;ReadPosRankSum=-0.030;VQSLOD=1.6378;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:31:60.18:0,60,1085	0/0:7,0:7:18.06:0,18,311	./.	./.	0/0:21,0:20:31.06:0,31,304	0/0:26,0:24:16.74:0,17,181	0/0:22,0:15:15.49:0,15,160	0/0:27,0:26:62.15:0,62,563	0/0:22,0:19:12.50:0,12,161	0/1:15,0:10:52.89:53,0,118	./.	0/1:3,4:7:14.69:61,0,15	0/1:12,1:9:16.24:100,0,16	1/1:11,0:10:1.25:3,1,0	0/0:14,0:14:21.07:0,21,396	1/1:11,0:9:2.66:17,3,0	0/0:17,0:16:34.36:0,34,614	0/0:8,0:5:9.50:0,9,115	0/0:13,0:11:18.94:0,19,194	0/0:21,0:21:29.10:0,29,329	0/0:15,0:13:2.67:0,3,19	0/1:13,0:13:0:0,0,0	0/0:23,0:19:29.66:0,30,338	0/0:20,0:18:8.10:0,8,66	./.	0/0:23,0:22:12.59:0,13,363	0/0:27,0:26:33.55:0,34,353	0/0:14,0:11:21.76:0,22,208
chr10	90850179	.	CTG	C	1102.98	PASS	AB=0.973;AC=25;AF=0.463;AN=54;BaseQRankSum=3.879;DP=476;FS=0.000;HRun=0;HaplotypeScore=105.7666;InbreedingCoeff=0.4035;MQ=40.75;MQ0=34;MQRankSum=2.305;QD=3.79;ReadPosRankSum=-0.979;VQSLOD=2.3555;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:31:8.65:0,9,307	0/1:8,0:8:8.09:8,0,52	0/0:1,0:1:2.97:0,3,20	0/0:5,0:1:0:0,0,0	1/1:16,4:19:20.94:199,21,0	1/1:12,13:23:11.93:116,12,0	1/1:17,3:14:14.21:99,14,0	1/1:26,0:26:8.71:48,9,0	0/1:20,1:18:27.26:57,0,27	0/1:19,0:14:0.89:1,0,61	0/0:13,0:7:5.99:0,6,48	0/0:13,0:12:8.97:0,9,71	0/1:14,0:11:6.61:7,0,32	0/0:12,0:12:2.99:0,3,24	0/0:17,0:17:18.04:0,18,230	0/0:12,0:10:2.94:0,3,18	0/0:17,0:16:3.18:0,3,260	0/0:9,0:6:4.78:0,5,24	1/1:11,0:10:3.01:32,3,0	0/1:18,2:20:31.74:67,0,32	./.	0/0:14,0:14:2.99:0,3,24	1/1:19,3:17:17.83:162,18,0	1/1:18,2:20:8.67:58,9,0	0/0:20,0:19:5.82:0,6,50	1/1:24,2:26:26.56:198,27,0	1/1:22,2:23:17.94:179,18,0	1/1:11,0:11:5.75:45,6,0
chr10	90853000	.	CTTTCTTTCTTTT	C	1773.45	PASS	AB=0.962;AC=21;AF=0.375;AN=56;BaseQRankSum=-3.555;DP=353;FS=5.857;HRun=0;HaplotypeScore=115.8311;InbreedingCoeff=0.1390;MQ=48.13;MQ0=30;MQRankSum=4.272;QD=8.69;ReadPosRankSum=0.491;VQSLOD=1.2031;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:14:99:172,0,147	0/1:6,0:6:1.38:1,0,148	0/0:10,0:1:2.97:0,3,20	0/0:5,0:1:2.04:0,2,6	0/0:20,0:20:48.29:0,48,643	0/0:8,0:7:21.07:0,21,892	0/0:9,0:6:7.81:0,8,65	0/0:15,0:12:24.27:0,24,186	0/0:12,0:12:26.95:0,27,634	1/1:9,0:14:8.40:278,8,0	1/1:3,19:22:25.77:158,26,0	0/1:17,0:16:31.45:115,0,31	1/1:0,5:5:3.01:105,3,0	1/1:15,0:13:27.84:301,28,0	0/0:13,0:12:35.69:0,36,483	0/1:4,11:15:23.44:30,0,23	0/0:22,0:18:31.54:0,32,324	0/1:20,0:17:89.59:279,0,90	0/0:12,0:10:23.49:0,23,412	0/1:8,0:8:44.73:45,0,56	0/1:12,0:12:19.54:20,0,210	1/1:10,0:10:8.47:191,8,0	0/0:9,0:7:14.91:0,15,199	0/0:13,0:12:15.45:0,15,191	0/1:12,0:12:0.85:168,0,1	0/1:12,0:12:63.93:64,0,337	0/1:9,0:8:7.89:8,0,154	0/1:8,0:6:11.80:12,0,101
chr10	90853009	.	T	TC	744.54	PASS	AB=0.873;AC=16;AF=0.286;AN=56;BaseQRankSum=1.568;DP=399;FS=5.524;HRun=1;HaplotypeScore=74.5241;InbreedingCoeff=0.0215;MQ=53.06;MQ0=26;MQRankSum=-2.122;QD=4.21;ReadPosRankSum=2.682;VQSLOD=0.7469;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:25:46.87:0,47,384	0/0:5,0:5:7.22:0,7,63	0/0:18,0:5:2.59:0,3,10	0/1:8,0:2:0:0,0,0	0/1:18,3:21:34.97:130,0,35	0/1:9,1:9:16.29:16,0,101	0/1:10,1:8:4.47:4,0,44	0/1:19,2:18:2.95:148,0,3	0/1:12,0:12:4.18:4,0,68	0/0:19,0:17:40.38:0,40,357	0/0:22,0:22:39.65:0,40,415	0/0:15,0:14:38.67:0,39,338	0/0:5,0:5:2.59:0,3,13	0/0:14,0:12:32.88:0,33,287	0/0:13,0:12:33.72:0,34,290	0/0:15,0:15:11.14:0,11,69	0/0:22,0:19:51.69:0,52,385	0/0:22,0:19:50.73:0,51,511	1/1:7,6:12:9.27:146,9,0	0/1:9,3:12:20.55:21,0,37	0/1:11,2:13:60.43:79,0,60	0/0:12,0:12:30.81:0,31,286	1/1:5,7:10:9.58:96,10,0	0/1:9,8:16:18.58:106,0,19	0/0:12,0:12:32.97:0,33,327	0/1:9,2:11:38.19:38,0,126	0/1:10,0:9:28.95:29,0,70	0/1:3,3:5:12.85:81,0,13
chr10	90853556	.	C	CT	1655.48	PASS	AB=0.923;AC=19;AF=0.339;AN=56;BaseQRankSum=0.358;DP=341;FS=14.601;HRun=4;HaplotypeScore=67.0164;InbreedingCoeff=0.7857;MQ=71.05;MQ0=0;MQRankSum=-0.313;QD=17.99;ReadPosRankSum=-0.048;VQSLOD=2.1421;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1325	0/0:5,0:5:15.04:0,15,170	0/0:18,0:10:16.12:0,16,220	0/0:12,0:10:11.29:0,11,178	0/0:6,0:6:17.40:0,17,97	0/0:9,0:9:9.26:0,9,56	0/0:21,0:21:46.22:0,46,239	0/0:17,0:16:8.25:0,8,119	0/0:4,0:4:5.72:0,6,31	1/1:4,5:9:18.05:208,18,0	1/1:2,1:3:6.01:61,6,0	1/1:3,7:9:18.01:199,18,0	1/1:0,6:6:11.99:129,12,0	1/1:1,3:4:8.39:81,8,0	0/0:10,0:10:30.07:0,30,331	1/1:7,4:10:12.04:145,12,0	0/0:34,0:34:99:0,102,1147	1/1:3,25:30:55.57:828,56,0	0/0:15,0:15:15.82:0,16,127	0/0:6,0:6:14.46:0,14,78	0/0:11,0:11:11.46:0,11,131	1/1:1,2:3:6.02:72,6,0	0/0:4,0:4:10.87:0,11,52	0/0:17,0:16:34.31:0,34,185	1/1:1,2:4:6.51:100,7,0	0/1:11,1:12:29.39:29,0,66	0/0:11,0:11:18.11:0,18,118	0/0:9,0:9:16.20:0,16,88
chr10	90853560	.	TC	T	2410.90	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=10.021;DP=350;FS=10.639;HRun=1;HaplotypeScore=63.4276;InbreedingCoeff=0.8029;MQ=70.05;MQ0=0;MQRankSum=0.770;QD=10.62;ReadPosRankSum=-1.023;VQSLOD=0.1156;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1618	0/0:5,0:5:15.05:0,15,209	0/0:18,0:10:3.08:0,3,217	0/0:11,0:9:19.44:0,19,182	1/1:6,0:6:7.12:28,7,0	1/1:6,1:7:6.47:77,6,0	1/1:21,1:22:45.88:224,46,0	1/1:15,1:14:7.92:121,8,0	1/1:5,0:4:5.57:58,6,0	1/1:8,0:8:20.39:142,20,0	1/1:3,0:3:5.89:44,6,0	1/1:9,0:8:12.68:81,13,0	1/1:7,0:7:11.45:79,11,0	1/1:5,0:5:11.59:76,12,0	0/0:10,0:10:30.10:0,30,419	1/1:9,0:8:16.38:108,16,0	0/0:38,0:38:99:0,111,1476	1/1:35,0:35:80.48:523,80,0	1/1:13,2:15:36.16:204,36,0	1/1:6,0:6:13.51:58,14,0	1/1:10,1:11:17.35:105,17,0	1/1:3,0:3:5.90:38,6,0	1/1:4,0:4:8.07:24,8,0	1/1:17,0:16:34.33:161,34,0	1/1:4,0:4:11.03:61,11,0	1/1:11,0:11:18.98:111,19,0	1/1:10,0:10:18.57:99,19,0	1/1:14,0:14:30.12:171,30,0
chr10	90853662	.	CTTAT	C	618.94	PASS	AC=20;AF=0.909;AN=22;BaseQRankSum=3.026;DP=208;FS=0.000;HRun=0;HaplotypeScore=34.2877;InbreedingCoeff=0.2766;MQ=53.79;MQ0=7;MQRankSum=-1.348;QD=6.45;ReadPosRankSum=2.466;VQSLOD=1.2617;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:22.32:0,22,477	./.	./.	./.	./.	1/1:9,0:13:6.01:56,6,0	./.	./.	1/1:3,0:4:3:28,3,0	1/1:6,0:7:3:28,3,0	./.	./.	./.	1/1:2,0:3:3:28,3,0	1/1:7,4:11:9.03:136,9,0	./.	1/1:16,12:28:23.10:305,23,0	./.	1/1:8,1:7:3.01:45,3,0	./.	./.	./.	./.	./.	1/1:1,0:3:3:28,3,0	1/1:3,0:4:3:28,3,0	./.	1/1:11,0:12:3:28,3,0
chr10	90854463	.	A	ACC	1458.79	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=1.980;DP=400;FS=13.004;HRun=8;HaplotypeScore=53.8024;InbreedingCoeff=0.8969;MQ=85.66;MQ0=0;MQRankSum=-1.931;QD=16.03;ReadPosRankSum=0.440;VQSLOD=0.2039;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,105,1169	0/0:7,0:7:18.04:0,18,201	0/0:15,0:16:27:0,27,300	0/0:20,0:21:26.55:0,27,391	0/0:12,0:12:26.95:0,27,278	0/0:21,0:21:51.13:0,51,568	0/0:25,0:25:60.12:0,60,658	0/0:11,0:11:24.05:0,24,260	0/0:18,0:18:48.12:0,48,535	1/1:4,5:9:9.01:114,9,0	1/1:5,5:10:12.04:190,12,0	1/1:4,8:13:11.53:141,12,0	1/1:2,9:11:12.04:191,12,0	1/1:2,15:17:24.08:381,24,0	0/0:12,0:12:30.07:0,30,334	1/1:3,3:7:8.52:104,9,0	0/0:24,0:24:63.16:0,63,702	1/1:5,9:15:21.03:302,21,0	0/0:14,0:14:21.03:0,21,223	0/0:9,0:9:18.02:0,18,190	0/0:24,0:24:54.01:0,54,579	1/1:1,6:7:12.04:191,12,0	0/0:7,0:7:21.06:0,21,232	0/0:22,0:22:54.13:0,54,601	1/1:2,0:2:3.01:45,3,0	0/0:8,0:8:15.03:0,15,166	0/0:17,0:17:42.05:0,42,440	0/0:1,0:1:3.01:0,3,33
chr10	90857343	.	A	AGCACCGTAACTGGTAC	46140.79	PASS	AB=0.635;AC=25;AF=0.446;AN=56;BaseQRankSum=-1.380;DP=725;FS=12.354;HRun=0;HaplotypeScore=287.8738;InbreedingCoeff=0.9271;MQ=72.22;MQ0=0;MQRankSum=-19.410;QD=141.10;ReadPosRankSum=-4.040;VQSLOD=2.7567;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,129,5585	0/0:17,0:17:45.15:0,45,2030	0/0:14,0:14:36.09:0,36,1257	0/0:25,0:25:69.17:0,69,2576	1/1:19,10:34:54.18:2844,54,0	1/1:11,9:22:54.19:3625,54,0	1/1:25,14:42:99:7321,108,0	1/1:28,0:30:78.25:4568,78,0	1/1:11,12:26:63.22:4344,63,0	0/0:32,0:32:90.31:0,90,4111	0/0:21,0:21:60.21:0,60,2697	0/0:27,0:27:75.24:0,75,3384	0/0:28,0:28:78.27:0,78,3454	0/0:29,0:29:84.27:0,84,3580	0/0:22,0:22:60.21:0,60,2766	0/0:19,0:19:54.17:0,54,2304	0/0:45,0:45:99:0,129,5848	0/0:30,0:30:87.30:0,87,3916	1/1:13,2:20:51.16:2069,51,0	1/1:9,18:27:72.25:4765,72,0	1/1:11,6:21:29.88:1927,30,0	0/0:24,0:24:63.20:0,63,2665	1/1:8,8:18:41.95:2821,42,0	1/1:14,8:24:45.15:2339,45,0	0/0:19,0:19:57.20:0,57,2401	0/1:14,13:33:50.58:5193,0,51	1/1:12,5:21:44.94:2672,45,0	1/1:2,6:7:21.07:1652,21,0
chr10	90858621	.	C	CGTGCTG	10396.15	PASS	AB=0.727;AC=25;AF=0.446;AN=56;BaseQRankSum=13.334;DP=483;FS=0.794;HRun=0;HaplotypeScore=173.3759;InbreedingCoeff=0.8978;MQ=81.79;MQ0=0;MQRankSum=-13.152;QD=58.08;ReadPosRankSum=-0.668;VQSLOD=4.7837;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,3287	0/0:8,0:8:21.07:0,21,505	0/0:18,0:18:45.15:0,45,1082	0/0:15,0:15:32.26:0,32,807	1/1:8,5:13:3.30:439,3,0	1/1:10,5:15:36.52:888,37,0	1/1:13,4:17:45.09:1327,45,0	1/1:20,0:20:52.99:1506,53,0	1/1:10,6:16:45.05:1212,45,0	0/0:17,0:17:45.13:0,45,1052	0/0:11,0:11:33.11:0,33,842	0/0:25,0:25:75.22:0,75,1766	0/0:9,0:9:27.08:0,27,639	0/0:19,0:19:57.17:0,57,1322	0/0:11,0:11:33.09:0,33,742	0/0:19,0:19:57.15:0,57,1293	0/0:45,0:44:99:0,132,3188	0/0:37,0:37:99:0,102,2567	1/1:9,1:11:22.54:788,23,0	1/1:8,3:11:18.04:482,18,0	1/1:17,1:18:17.68:348,18,0	0/0:10,0:10:27.09:0,27,681	1/1:6,6:12:17.24:582,17,0	1/1:7,4:11:18.06:497,18,0	0/0:13,0:13:36.12:0,36,922	0/1:10,6:16:37.54:957,0,38	1/1:7,4:11:27.08:763,27,0	1/1:6,2:8:24.06:606,24,0
chr10	90858622	.	A	ATGGCAGAGCTCTC	23974.09	PASS	AB=0.793;AC=23;AF=0.411;AN=56;BaseQRankSum=14.032;DP=575;FS=6.748;HRun=0;HaplotypeScore=273.7896;InbreedingCoeff=0.7624;MQ=74.26;MQ0=0;MQRankSum=-16.107;QD=85.62;ReadPosRankSum=1.056;VQSLOD=3.3920;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,4461	0/0:8,0:8:21.07:0,21,794	0/0:17,0:17:48.01:0,48,1308	0/0:14,0:14:35.86:0,36,1123	1/1:17,5:22:17.40:994,17,0	1/1:17,5:22:33.70:1878,34,0	1/1:26,4:30:33.83:2992,34,0	1/1:23,0:23:35.77:1912,36,0	1/1:20,6:26:7.50:2942,7,0	0/0:16,0:16:45.15:0,45,1577	0/0:11,0:11:33.10:0,33,1124	0/0:25,0:25:72.22:0,72,2577	0/0:8,0:8:24.08:0,24,968	0/0:18,0:18:54.16:0,54,1878	0/0:10,0:10:30.08:0,30,967	0/0:17,0:17:48.16:0,48,1833	0/0:45,0:44:99:0,126,4784	0/0:37,0:37:99:0,102,3739	1/1:22,1:23:36.08:1927,36,0	1/1:12,3:15:15.05:840,15,0	1/1:28,1:29:14.96:1326,15,0	0/0:10,0:10:27.09:0,27,1044	0/1:14,6:20:14.57:1559,0,15	1/1:13,4:17:22.28:1303,22,0	0/0:13,0:13:36.12:0,36,1397	0/1:22,5:28:57.91:3376,0,58	1/1:10,4:14:30.10:1744,30,0	0/1:8,3:11:20.85:1182,0,21
chr10	90858625	.	C	CT	86.63	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=11.730;DP=479;FS=7.368;HRun=0;HaplotypeScore=114.2303;InbreedingCoeff=0.0752;MQ=79.93;MQ0=0;MQRankSum=-9.448;QD=0.86;ReadPosRankSum=1.775;VQSLOD=1.2430;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1805	0/0:8,0:8:21.07:0,21,294	0/0:17,0:17:48.10:0,48,605	0/0:14,0:14:36.06:0,36,444	0/1:16,0:16:2.03:30,0,2	0/1:15,0:15:18.57:30,0,19	0/0:19,0:19:0.59:0,1,96	0/1:7,0:7:7.41:7,0,173	0/1:18,0:18:32.54:33,0,88	0/0:15,0:15:45.15:0,45,630	0/0:11,0:11:33.11:0,33,460	0/0:22,0:22:66.22:0,66,923	0/0:8,0:8:24.08:0,24,336	0/0:18,0:18:54.16:0,54,737	0/0:9,0:9:27.09:0,27,378	0/0:16,0:16:48.16:0,48,671	0/0:42,0:41:99:0,126,1744	0/0:36,0:36:99:0,105,1447	0/0:14,0:14:34.62:0,35,502	1/1:7,0:7:6.11:19,6,0	0/0:21,5:26:7.18:0,7,316	0/0:12,0:12:30.10:0,30,419	0/1:16,0:16:12.91:37,0,13	0/1:14,0:14:20.27:20,0,120	0/0:13,0:13:36.12:0,36,504	0/0:23,0:23:19.92:0,20,542	0/0:10,0:10:0.37:0,0,173	0/1:8,0:8:46.19:46,0,65
chr10	90859196	.	C	CA	14732.31	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-17.903;DP=756;FS=2.285;HRun=1;HaplotypeScore=70.7616;InbreedingCoeff=0.9998;MQ=71.80;MQ0=0;MQRankSum=-1.599;QD=39.71;ReadPosRankSum=0.485;VQSLOD=5.4437;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1595	0/0:10,0:10:27.09:0,27,351	0/0:24,0:23:64.73:0,65,784	0/0:32,0:31:42.60:0,43,907	1/1:1,24:25:63.13:885,63,0	1/1:1,29:30:84.28:1259,84,0	1/1:0,45:45:99:1979,132,0	1/1:2,26:28:75.25:1123,75,0	1/1:3,33:36:90.30:1349,90,0	0/0:23,0:23:69.22:0,69,896	0/0:25,0:25:69.21:0,69,881	0/0:16,0:16:45.15:0,45,584	0/0:25,0:25:75.21:0,75,956	0/0:26,0:26:78.25:0,78,1004	0/0:24,0:24:72.23:0,72,935	0/0:31,0:31:90.29:0,90,1169	0/0:39,0:39:99:0,100,1393	0/0:24,0:23:72.23:0,72,934	1/1:1,23:24:66.21:968,66,0	1/1:0,24:24:66.18:964,66,0	1/1:1,56:57:99:2293,153,0	0/0:27,0:27:78.25:0,78,1003	1/1:0,20:20:54.18:809,54,0	1/1:0,20:20:51.17:764,51,0	0/0:17,0:17:51.17:0,51,662	1/1:2,12:14:39.10:540,39,0	1/1:3,26:29:69.23:1034,69,0	1/1:1,18:19:51.17:765,51,0
chr10	90861559	.	TTG	T	7042.78	PASS	AB=0.935;AC=27;AF=0.482;AN=56;BaseQRankSum=15.293;DP=623;FS=4.198;HRun=0;HaplotypeScore=94.1907;InbreedingCoeff=0.9193;MQ=65.83;MQ0=2;MQRankSum=0.055;QD=22.87;ReadPosRankSum=2.311;VQSLOD=5.4030;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:48:99:0,123,1873	0/0:6,0:6:18.06:0,18,294	0/1:27,2:20:34.77:35,0,453	0/0:38,0:30:31.42:0,31,797	1/1:3,13:16:36.11:443,36,0	1/1:4,12:16:36.11:443,36,0	1/1:6,21:27:42.13:517,42,0	1/1:7,13:19:39.11:468,39,0	1/1:2,8:10:24.08:295,24,0	0/0:16,0:16:36.11:0,36,556	0/0:6,0:6:12.04:0,12,192	0/0:19,0:19:45.14:0,45,703	0/0:14,0:14:33.09:0,33,512	0/0:19,0:19:54.18:0,54,881	0/0:28,0:28:66.23:0,66,1067	0/0:15,0:15:36.11:0,36,560	0/0:45,0:45:99:0,103,1810	0/0:28,0:28:66.21:0,66,1048	1/1:8,16:24:42.06:484,42,0	1/1:2,14:15:30.09:369,30,0	1/1:11,55:65:99:1773,144,0	0/0:17,0:17:45.15:0,45,724	1/1:3,9:12:27.08:332,27,0	1/1:2,31:33:69.22:850,69,0	0/0:16,0:16:39.13:0,39,633	1/1:5,17:22:51.16:628,51,0	1/1:2,9:11:18.06:222,18,0	1/1:1,5:6:15.05:184,15,0
chr10	90861688	.	C	CT	1038.89	PASS	AC=24;AF=0.480;AN=50;BaseQRankSum=4.929;DP=192;FS=3.377;HRun=1;HaplotypeScore=35.6571;InbreedingCoeff=0.7784;MQ=98.40;MQ0=0;MQRankSum=-0.905;QD=12.37;ReadPosRankSum=-1.500;VQSLOD=1.5497;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:23.94:0,24,194	./.	0/0:23,0:17:38.59:0,39,324	0/0:14,0:12:19.99:0,20,176	1/1:1,2:3:3:25,3,0	1/1:10,0:10:23.67:167,24,0	1/1:13,0:13:35.85:296,36,0	1/1:1,0:7:17.96:146,18,0	1/1:0,5:5:3:27,3,0	0/0:4,0:4:6:0,6,51	0/0:4,0:4:5.78:0,6,48	0/0:4,0:4:11.99:0,12,105	0/0:5,0:5:11.94:0,12,94	0/0:7,0:7:8.93:0,9,70	0/0:1,0:1:2.68:0,3,11	0/0:8,0:8:17.58:0,18,151	0/0:13,0:13:25.98:0,26,179	0/0:5,0:5:14.99:0,15,128	1/1:1,3:5:8.96:69,9,0	1/1:2,0:2:6:52,6,0	1/1:2,11:14:3:25,3,0	./.	./.	1/1:10,0:10:26.35:211,26,0	0/0:8,0:8:17.98:0,18,149	1/1:1,0:5:9.68:74,10,0	1/1:2,3:5:5.98:51,6,0	1/1:5,0:5:11.36:84,11,0
chr10	90862919	.	CG	C	12961.57	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=16.447;DP=710;FS=18.887;HRun=1;HaplotypeScore=69.4926;InbreedingCoeff=0.9997;MQ=78.23;MQ0=0;MQRankSum=-3.296;QD=37.68;ReadPosRankSum=1.706;VQSLOD=3.1121;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1739	0/0:8,0:8:24.08:0,24,378	0/0:21,0:21:56.98:0,57,793	0/0:23,0:23:65.86:0,66,905	1/1:0,24:24:63.14:852,63,0	1/1:0,23:23:57.19:796,57,0	1/1:0,25:26:66.22:921,66,0	1/1:0,16:16:48.16:670,48,0	1/1:0,25:25:66.22:922,66,0	0/0:36,0:36:99:0,108,1619	0/0:21,0:21:60.20:0,60,953	0/0:31,0:31:90.28:0,90,1386	0/0:18,0:18:51.05:0,51,778	0/0:24,0:24:69.22:0,69,1075	0/0:32,0:32:96.26:0,96,1451	0/0:13,0:13:39.06:0,39,547	0/0:27,1:28:42.28:0,42,1192	0/0:20,0:20:54.18:0,54,860	1/1:0,15:15:45.14:597,45,0	1/1:0,26:26:75.22:1025,75,0	1/1:0,37:37:90.30:1256,90,0	0/0:32,0:32:96.24:0,96,1421	1/1:0,25:25:60.20:837,60,0	1/1:0,48:48:99:1927,138,0	0/0:21,0:21:63.17:0,63,954	1/1:0,21:21:60.18:819,60,0	1/1:1,36:37:99:1502,108,0	1/1:0,21:21:60.20:838,60,0
chr10	90863365	.	CAGA	C	13042.63	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=18.826;DP=692;FS=0.606;HRun=0;HaplotypeScore=125.2121;InbreedingCoeff=0.9992;MQ=78.15;MQ0=0;MQRankSum=-10.454;QD=39.40;ReadPosRankSum=2.621;VQSLOD=5.7986;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,2531	0/0:14,0:14:39.12:0,39,855	0/0:22,0:22:54.07:0,54,1053	0/0:26,0:26:54.72:0,55,1166	1/1:0,22:22:32.82:551,33,0	1/1:0,19:19:45.15:766,45,0	1/1:1,25:26:54.18:917,54,0	1/1:0,30:30:87.18:1287,87,0	1/1:1,27:28:72.25:1225,72,0	0/0:30,0:30:87.28:0,87,1877	0/0:17,0:17:45.14:0,45,977	0/0:29,0:29:84.21:0,84,1796	0/0:17,0:17:51.06:0,51,1032	0/0:19,0:19:54.17:0,54,1195	0/0:35,0:35:99:0,105,2323	0/0:26,0:26:78.22:0,78,1730	0/0:31,0:31:93.30:0,93,2029	0/0:20,0:20:57.20:0,57,1306	1/1:0,23:23:66.06:951,66,0	1/1:1,18:19:54.18:918,54,0	1/1:2,53:55:99:2041,120,0	0/0:19,0:19:54.16:0,54,1114	1/1:1,13:14:27.09:459,27,0	1/1:0,26:26:59.81:1022,60,0	0/0:16,0:16:48.13:0,48,977	1/1:2,29:31:21.03:1326,21,0	1/1:0,26:26:60.21:1018,60,0	1/1:0,12:12:33.11:562,33,0
chr10	90863676	.	C	CTGTT	19680.81	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=16.876;DP=677;FS=4.299;HRun=0;HaplotypeScore=132.5492;InbreedingCoeff=0.9999;MQ=70.51;MQ0=0;MQRankSum=-12.658;QD=59.82;ReadPosRankSum=-1.344;VQSLOD=5.8271;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,135,2446	0/0:16,0:16:48.16:0,48,885	0/0:13,0:13:39.13:0,39,661	0/0:13,0:12:33.11:0,33,573	1/1:3,22:26:66.07:1502,66,0	1/1:4,19:25:69.16:1638,69,0	1/1:12,17:30:84.09:1864,84,0	1/1:8,19:28:69.23:1672,69,0	1/1:2,18:23:57.16:1416,57,0	0/0:40,0:40:99:0,114,2083	0/0:28,0:28:78.24:0,78,1380	0/0:22,0:22:66.23:0,66,1231	0/0:20,0:20:57.16:0,57,1000	0/0:15,0:15:39.10:0,39,658	0/0:19,0:19:51.17:0,51,952	0/0:25,0:25:72.22:0,72,1273	0/0:27,0:27:75.26:0,75,1399	0/0:17,0:17:48.16:0,48,883	1/1:7,15:22:51.17:1296,51,0	1/1:3,26:30:80.14:1821,80,0	1/1:3,24:27:71.87:1349,72,0	0/0:16,0:16:45.14:0,45,803	1/1:5,11:16:41.96:828,42,0	1/1:8,15:23:50.58:1143,51,0	0/0:29,0:29:81.28:0,81,1506	1/1:6,28:37:52.36:2545,52,0	1/1:6,24:29:72.20:1810,72,0	1/1:2,10:12:30.10:797,30,0
chr10	90864281	.	TC	T	10739.54	PASS	AB=0.917;AC=27;AF=0.482;AN=56;BaseQRankSum=13.871;DP=586;FS=15.462;HRun=1;HaplotypeScore=60.3909;InbreedingCoeff=0.9365;MQ=79.49;MQ0=0;MQRankSum=-3.565;QD=38.22;ReadPosRankSum=0.562;VQSLOD=3.5242;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,2288	0/0:13,0:13:39.11:0,39,599	0/0:29,0:29:84.29:0,84,1343	0/0:18,0:18:53.21:0,53,790	1/1:0,18:18:54.18:755,54,0	1/1:0,28:28:84.28:1175,84,0	1/1:0,21:21:63.21:881,63,0	1/1:0,20:20:60.20:838,60,0	1/1:0,21:21:57.19:797,57,0	0/0:22,0:22:66.23:0,66,1055	0/0:13,0:13:36.12:0,36,576	0/0:19,0:19:57.19:0,57,911	0/0:22,0:22:66.23:0,66,1055	0/0:16,0:16:48.16:0,48,767	0/0:20,0:19:60.19:0,60,936	0/1:10,1:11:8.87:9,0,423	0/0:27,0:27:81.28:0,81,1295	0/0:29,0:29:87.28:0,87,1366	1/1:0,21:21:54.18:754,54,0	1/1:0,19:19:54.18:755,54,0	1/1:0,29:29:84.28:1175,84,0	0/0:13,0:13:39.12:0,39,597	1/1:0,16:16:45.15:629,45,0	1/1:0,32:32:90.30:1259,90,0	0/0:15,0:15:42.13:0,42,648	1/1:0,16:16:48.16:668,48,0	1/1:1,19:19:48.16:671,48,0	1/1:0,9:9:27.09:375,27,0
chr10	90864809	.	GAC	G	5173.11	PASS	AB=0.841;AC=39;AF=0.696;AN=56;BaseQRankSum=8.797;DP=594;FS=24.508;HRun=0;HaplotypeScore=217.1887;InbreedingCoeff=0.6521;MQ=53.36;MQ0=25;MQRankSum=-9.492;QD=13.87;ReadPosRankSum=-1.517;VQSLOD=2.5592;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:45.47:0,45,806	0/0:10,0:10:21.72:0,22,427	0/0:47,0:21:52.69:0,53,666	0/0:66,0:25:54.51:0,55,822	1/1:7,14:20:3.01:57,3,0	1/1:8,3:11:11.70:112,12,0	1/1:13,4:16:12.35:133,12,0	0/1:14,1:13:4.38:131,0,4	1/1:9,10:19:27.02:299,27,0	1/1:24,12:34:45.11:828,45,0	1/1:10,8:16:8.97:78,9,0	1/1:9,9:18:35.76:387,36,0	1/1:3,3:6:9.03:115,9,0	0/1:7,1:8:1.19:7,0,1	0/0:27,0:26:43.97:0,44,869	1/1:8,15:22:12.13:391,12,0	0/0:26,0:25:60.20:0,60,1034	1/1:7,8:15:21.14:281,21,0	1/1:11,1:11:12.61:135,13,0	1/1:17,10:27:32.37:391,32,0	0/0:18,1:15:0:0,0,0	1/1:12,8:20:2.88:138,3,0	1/1:13,7:19:1.18:176,1,0	1/1:12,4:17:1.72:141,2,0	1/1:11,15:25:42.09:472,42,0	1/1:16,4:19:16.66:378,17,0	0/1:9,7:16:0.47:277,0,0	1/1:3,5:8:21.04:247,21,0
chr10	90864811	.	C	CAG	7266.27	PASS	AC=42;AF=0.778;AN=54;BaseQRankSum=9.715;DP=600;FS=40.456;HRun=0;HaplotypeScore=239.2993;InbreedingCoeff=0.8615;MQ=50.90;MQ0=26;MQRankSum=-11.055;QD=18.97;ReadPosRankSum=-2.543;VQSLOD=3.2578;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:52.03:0,52,739	0/0:10,0:10:27.06:0,27,388	0/0:46,0:20:53.90:0,54,732	0/0:66,0:24:36.67:0,37,726	1/1:19,3:21:11.52:128,12,0	1/1:6,5:11:3.13:148,3,0	1/1:10,6:15:14.16:226,14,0	1/1:12,4:14:38.13:399,38,0	1/1:15,3:18:29.27:326,29,0	1/1:26,13:37:83.69:1330,84,0	1/1:17,1:16:8.98:95,9,0	1/1:14,3:17:35.95:464,36,0	1/1:9,1:10:8.94:84,9,0	1/1:5,2:7:2.57:17,3,0	0/0:26,0:25:53.81:0,54,772	1/1:19,4:22:20.65:516,21,0	0/0:26,0:25:62.34:0,62,926	1/1:13,3:16:25.03:405,25,0	1/1:10,3:11:21.18:336,21,0	1/1:20,7:27:36.29:423,36,0	./.	1/1:18,2:20:13.45:162,13,0	1/1:18,3:20:8.97:191,9,0	1/1:11,6:17:6.09:217,6,0	1/1:20,7:26:44.86:565,45,0	1/1:13,8:20:40.85:703,41,0	1/1:15,1:16:25.06:376,25,0	1/1:8,0:8:20.53:155,21,0
chr10	90864815	.	GAC	G	1255.50	PASS	AB=0.876;AC=33;AF=0.589;AN=56;BaseQRankSum=7.578;DP=565;FS=24.455;HRun=0;HaplotypeScore=230.4659;InbreedingCoeff=0.4366;MQ=45.99;MQ0=27;MQRankSum=-7.999;QD=3.71;ReadPosRankSum=0.829;VQSLOD=1.3999;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:24.70:0,25,464	0/0:10,0:10:20.90:0,21,323	0/0:42,1:17:22.25:0,22,202	0/0:63,0:21:27.06:0,27,314	0/1:18,5:22:0.96:3,0,1	1/1:5,3:8:5.67:36,6,0	1/1:11,4:14:1.39:4,1,0	0/1:14,1:13:26.82:49,0,27	1/1:13,3:16:14.13:66,14,0	1/1:24,10:31:17.57:369,18,0	1/1:9,7:14:3.19:15,3,0	1/1:9,5:14:14.56:93,15,0	1/1:9,1:10:3.88:25,4,0	0/1:8,1:9:4.20:4,0,5	0/0:27,0:26:35.15:0,35,716	1/1:11,11:21:17.06:124,17,0	0/0:26,0:25:43.66:0,44,712	1/1:11,3:14:20.35:144,20,0	0/1:12,0:10:12.90:13,0,14	1/1:17,7:24:8.21:62,8,0	0/0:13,1:10:0:0,0,0	0/0:10,7:17:2.15:0,2,12	0/1:14,5:20:6.25:42,0,6	0/1:14,2:16:5.81:6,0,6	1/1:17,11:27:17.10:87,17,0	1/1:15,4:18:1.69:140,2,0	0/1:8,4:14:1.46:97,0,1	1/1:7,1:8:9.28:52,9,0
chr10	90864822	.	A	AGG	4258.72	PASS	AB=0.861;AC=35;AF=0.625;AN=56;BaseQRankSum=6.791;DP=551;FS=48.018;HRun=0;HaplotypeScore=245.6081;InbreedingCoeff=0.3665;MQ=43.29;MQ0=27;MQRankSum=-9.992;QD=12.06;ReadPosRankSum=2.376;VQSLOD=3.0725;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:55.04:0,55,817	0/0:12,0:12:28.39:0,28,473	0/0:38,0:14:37.92:0,38,510	0/0:56,0:14:27.56:0,28,441	1/1:16,4:19:2.68:59,3,0	1/1:7,1:8:9.01:95,9,0	1/1:16,1:16:8.32:161,8,0	0/1:12,7:16:36.25:501,0,36	1/1:12,3:15:10.47:226,10,0	1/1:21,7:24:59.68:649,60,0	1/1:13,4:15:9.80:143,10,0	0/1:13,2:15:1.92:202,0,2	1/1:6,4:10:8.51:135,9,0	1/1:3,4:7:6.02:75,6,0	0/0:28,0:27:56.61:0,57,914	1/1:18,1:19:8.55:186,9,0	0/0:24,0:23:59.34:0,59,968	1/1:11,3:14:33.27:338,33,0	0/1:11,3:12:80.58:82,0,81	1/1:18,6:24:14.68:294,15,0	0/0:8,4:8:0:0,0,0	0/1:14,2:16:18.97:73,0,19	0/1:23,3:25:44.48:100,0,44	0/1:16,1:17:23.37:26,0,23	1/1:23,4:26:9.43:219,9,0	0/1:15,3:17:39.15:283,0,39	1/1:12,2:14:18.38:222,18,0	1/1:4,3:7:17.51:189,18,0
chr10	90864829	.	GAC	G	260.51	PASS	AB=0.984;AC=20;AF=0.385;AN=52;BaseQRankSum=3.310;DP=517;FS=3.581;HRun=0;HaplotypeScore=235.5444;InbreedingCoeff=-0.1221;MQ=36.42;MQ0=30;MQRankSum=-0.720;QD=0.88;ReadPosRankSum=3.579;VQSLOD=2.5609;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,1:27:18.43:178,18,0	0/1:13,0:13:18.76:19,0,95	./.	./.	0/0:19,0:18:3.24:0,3,11	1/1:5,0:5:1.14:8,1,0	0/0:18,0:17:2.96:0,3,19	0/1:22,0:18:2.42:2,0,59	0/1:14,0:14:4.71:13,0,5	0/0:30,0:25:11.53:0,12,130	0/0:18,0:16:3.15:0,3,12	0/1:16,0:16:14.28:25,0,14	0/1:11,0:11:9.84:10,0,31	0/1:8,0:8:0.42:0,0,21	0/1:23,2:24:27.03:27,0,201	0/1:21,0:20:6.11:6,0,28	0/1:19,3:22:46.72:47,0,143	0/0:17,0:16:15.45:0,15,94	0/0:17,0:15:3.17:0,3,31	0/1:25,0:25:6.50:6,0,24	0/1:13,0:8:0.01:0,0,0	0/0:16,0:16:6.64:0,7,21	0/1:25,0:24:5.84:6,0,18	1/1:16,0:16:2.64:8,3,0	0/1:23,0:22:7.91:8,0,8	0/0:19,0:18:11.55:0,12,67	0/0:13,0:13:0.12:0,0,17	0/1:7,0:7:5.66:30,0,6
chr10	90864843	.	C	CAG	4079.17	PASS	AB=0.759;AC=41;AF=0.759;AN=54;BaseQRankSum=7.704;DP=483;FS=36.026;HRun=0;HaplotypeScore=217.4512;InbreedingCoeff=0.6369;MQ=33.38;MQ0=23;MQRankSum=-9.454;QD=11.36;ReadPosRankSum=1.107;VQSLOD=1.5421;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:58.90:0,59,442	0/0:13,0:13:22.73:0,23,232	0/0:5,0:1:2.98:0,3,22	0/0:16,0:1:3.01:0,3,40	1/1:19,4:22:2.98:35,3,0	1/1:3,1:4:8.77:113,9,0	1/1:7,11:17:2.90:18,3,0	1/1:27,0:21:43.25:334,43,0	1/1:10,4:14:26.54:268,27,0	1/1:29,4:28:33.34:467,33,0	1/1:14,3:16:6.31:61,6,0	1/1:11,4:15:13.31:241,13,0	1/1:5,6:11:23.89:268,24,0	1/1:2,6:8:11.98:150,12,0	0/0:24,0:23:44.74:0,45,464	1/1:16,2:17:23.95:170,24,0	0/0:23,0:22:50.41:0,50,473	1/1:13,4:16:9.96:321,10,0	1/1:16,1:15:2.88:168,3,0	1/1:12,13:25:20.94:236,21,0	./.	1/1:10,5:15:5.33:82,5,0	0/1:15,7:21:8.66:122,0,9	1/1:11,5:16:9.18:43,9,0	1/1:18,3:21:10.07:236,10,0	1/1:16,2:18:30.74:345,31,0	1/1:9,4:13:25.65:227,26,0	1/1:4,3:7:2.81:174,3,0
chr10	90865047	.	CAGACA	C	3431.63	PASS	AB=0.843;AC=18;AF=0.333;AN=54;BaseQRankSum=10.646;DP=578;FS=2.601;HRun=0;HaplotypeScore=268.0855;InbreedingCoeff=-0.3924;MQ=51.18;MQ0=9;MQRankSum=-9.685;QD=11.21;ReadPosRankSum=-7.443;VQSLOD=0.5748;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:99:0,111,3391	0/0:13,0:13:39.13:0,39,1206	0/0:56,0:34:84.26:0,84,2005	0/0:50,0:32:68.50:0,68,1513	0/1:24,5:29:99:236,0,363	0/0:5,0:5:12.04:0,12,179	0/1:12,3:15:99:216,0,204	0/0:13,0:12:19.19:0,19,381	0/1:8,1:9:54.67:55,0,129	0/1:33,3:35:99:171,0,1247	0/1:25,11:36:99:598,0,615	0/1:5,1:6:48.54:49,0,184	0/1:8,5:13:99:300,0,248	0/1:6,1:7:73.94:74,0,155	0/0:42,0:42:99:0,120,3316	0/1:6,1:6:38.99:39,0,56	0/0:40,0:40:99:0,114,3554	0/0:1,0:1:3.01:0,3,49	0/0:9,0:9:21.06:0,21,334	0/1:31,5:35:99:322,0,611	1/1:2,1:3:3:28,3,0	0/1:25,5:30:99:379,0,502	0/1:25,6:31:99:415,0,451	./.	0/1:16,4:20:99:288,0,561	0/1:13,1:14:27.43:27,0,363	0/1:8,3:11:99:179,0,105	0/1:2,1:3:57.60:58,0,88
chr10	90865052	.	AAC	A	4367.58	PASS	AB=0.789;AC=30;AF=0.556;AN=54;BaseQRankSum=9.411;DP=597;FS=11.079;HRun=0;HaplotypeScore=253.4367;InbreedingCoeff=0.1619;MQ=49.85;MQ0=14;MQRankSum=-11.774;QD=12.81;ReadPosRankSum=4.965;VQSLOD=2.7246;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:99:0,102,1615	0/0:13,1:14:1.60:0,2,551	0/0:57,0:31:48.08:0,48,662	0/0:55,0:32:38.34:0,38,569	0/1:19,9:31:25.79:203,0,26	1/1:4,2:6:5.21:86,5,0	1/1:10,4:14:6.48:146,6,0	0/1:10,0:9:11.95:12,0,43	0/1:6,1:7:18.69:31,0,19	0/1:14,23:37:47.21:751,0,47	0/1:24,11:37:9.10:296,0,9	1/1:3,3:6:12.47:130,12,0	0/1:6,4:11:4.65:121,0,5	1/1:4,3:7:4.59:88,5,0	0/0:43,0:43:99:0,105,1705	0/1:5,2:6:7.32:26,0,7	0/0:38,1:40:73.37:0,73,1708	1/1:0,1:1:3.01:37,3,0	1/1:7,1:8:3.01:37,3,0	1/1:18,20:39:14.79:617,15,0	0/0:3,0:3:2.50:0,2,9	0/1:20,10:33:31.37:338,0,31	1/1:14,15:32:38.64:480,39,0	./.	1/1:12,10:22:33.99:390,34,0	1/1:3,11:14:32.88:413,33,0	0/1:6,4:10:11.69:132,0,12	0/1:5,1:6:2.38:31,0,2
chr10	90865074	.	CAGA	C	5004.62	PASS	AB=0.716;AC=19;AF=0.352;AN=54;BaseQRankSum=8.812;DP=547;FS=0.370;HRun=0;HaplotypeScore=257.0631;InbreedingCoeff=-0.4353;MQ=50.37;MQ0=16;MQRankSum=-9.724;QD=16.35;ReadPosRankSum=1.945;VQSLOD=4.4583;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:99:0,117,2623	0/0:13,0:13:39.13:0,39,848	0/0:50,0:14:6.09:0,6,434	0/0:49,1:25:48.66:0,49,1001	0/1:14,12:26:67.68:441,0,68	0/1:3,2:5:33.66:59,0,34	0/1:6,5:11:71.78:177,0,72	0/1:3,0:2:22.54:23,0,56	0/1:1,2:3:30.52:79,0,31	0/1:26,10:35:99:355,0,669	0/1:15,17:32:99:716,0,109	0/1:3,2:5:51.99:73,0,52	0/1:5,5:10:48.78:194,0,49	0/1:3,2:5:64.48:82,0,64	0/0:39,0:38:99:0,114,2638	1/1:3,5:7:12.54:203,13,0	0/0:39,0:39:99:0,114,2648	0/0:1,0:1:2.99:0,3,23	0/0:4,0:3:6.02:0,6,113	0/1:24,15:38:99:553,0,281	0/0:0,1:1:3.01:0,3,50	0/1:14,15:29:99:695,0,122	0/1:20,14:34:99:575,0,139	./.	0/1:17,9:26:99:301,0,147	0/1:15,3:18:99:139,0,438	0/1:5,5:10:62.52:195,0,63	0/1:2,4:6:16.31:145,0,16
chr10	90865076	.	GA	G	1006.12	PASS	AB=0.929;AC=19;AF=0.352;AN=54;BaseQRankSum=10.068;DP=561;FS=7.882;HRun=2;HaplotypeScore=263.8568;InbreedingCoeff=-0.4630;MQ=55.34;MQ0=16;MQRankSum=-9.029;QD=3.20;ReadPosRankSum=3.178;VQSLOD=-0.1566;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:99:0,114,1674	0/0:13,0:13:39.06:0,39,520	0/0:52,0:16:24.39:0,24,295	0/0:54,1:27:48.96:0,49,646	0/1:21,5:26:65.21:156,0,65	0/1:4,1:5:9.86:10,0,40	0/1:12,1:13:31.72:32,0,57	0/1:4,0:3:31.50:31,0,38	0/1:3,0:3:11.64:12,0,30	0/1:35,2:36:80.84:81,0,693	0/1:29,3:32:99:170,0,126	0/1:5,0:5:9.87:10,0,45	0/1:10,0:10:30.59:31,0,61	0/1:5,0:5:19.87:20,0,60	0/0:40,0:39:99:0,114,1689	1/1:10,0:9:0.38:51,0,0	0/0:39,0:39:99:0,117,1702	0/0:1,0:1:2.96:0,3,19	0/0:4,0:3:6.02:0,6,84	0/1:36,3:38:99:113,0,264	0/0:1,0:1:3.01:0,3,42	0/1:27,3:30:99:204,0,146	0/1:31,3:34:98.58:99,0,135	./.	0/1:21,6:27:38.40:38,0,219	0/1:16,2:18:37.64:38,0,426	0/1:10,0:10:35.54:36,0,55	0/1:5,1:6:26.76:28,0,27
chr10	90865077	.	A	AAGT	2464.62	PASS	AB=0.991;AC=19;AF=0.365;AN=52;BaseQRankSum=3.796;DP=604;FS=25.879;HRun=0;HaplotypeScore=295.6383;InbreedingCoeff=-0.1984;MQ=52.97;MQ0=16;MQRankSum=-9.290;QD=7.27;ReadPosRankSum=-4.988;VQSLOD=0.8954;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:99:0,111,1869	0/0:13,0:13:30.10:0,30,528	0/0:52,0:16:24.97:0,25,368	0/0:53,0:25:52.63:0,53,740	0/1:29,0:29:95.81:217,0,96	0/1:7,0:7:39.07:74,0,39	1/1:16,0:16:7.86:126,8,0	0/0:5,0:4:6.02:0,6,95	0/1:4,0:4:29.99:30,0,49	0/1:38,1:38:99:152,0,845	0/1:32,1:33:99:287,0,239	0/1:5,0:5:42.76:43,0,43	0/0:13,0:13:2.08:0,2,108	0/1:8,0:7:84.04:102,0,84	0/0:40,0:39:99:0,114,1978	1/1:12,0:11:14.44:191,14,0	0/0:39,0:39:99:0,114,1951	./.	0/0:6,0:5:7.27:0,7,107	0/1:43,0:42:99:291,0,340	0/0:1,0:1:3.01:0,3,50	0/1:34,0:34:99:356,0,294	0/1:37,1:38:99:248,0,241	./.	0/1:30,0:30:99:107,0,240	0/1:22,1:23:99:176,0,561	0/1:12,0:12:95.87:98,0,96	1/1:6,0:6:2.42:126,2,0
chr10	90865079	.	CACACAT	C	2539.13	PASS	AB=0.954;AC=28;AF=0.538;AN=52;BaseQRankSum=14.666;DP=616;FS=2.688;HRun=0;HaplotypeScore=316.0637;InbreedingCoeff=0.0096;MQ=53.11;MQ0=16;MQRankSum=-11.772;QD=6.06;ReadPosRankSum=3.811;VQSLOD=1.6122;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:99:0,111,3218	0/0:12,0:12:29.89:0,30,857	0/1:50,0:16:57.74:58,0,251	0/0:54,0:27:12.89:0,13,928	0/1:29,1:30:4.15:90,0,4	0/1:7,0:7:2.56:17,0,3	1/1:15,0:15:4.12:38,4,0	0/1:7,0:6:8.30:8,0,52	1/1:4,0:4:8.72:49,9,0	0/1:35,4:38:17.18:583,0,17	0/1:31,3:34:17.86:291,0,18	1/1:5,0:5:5.78:31,6,0	0/1:14,0:14:28.83:87,0,29	1/1:7,0:6:5.27:24,5,0	0/0:41,0:40:99:0,117,3564	0/1:14,0:13:16.50:17,0,98	0/0:38,0:38:99:0,108,3381	./.	0/0:6,0:5:2.57:0,3,20	1/1:42,2:43:37:316,37,0	1/1:1,0:1:2.92:17,3,0	0/1:32,3:35:32.14:253,0,32	1/1:37,3:40:10.84:255,11,0	./.	0/1:27,3:30:50.10:224,0,50	0/1:24,1:25:99:158,0,164	1/1:11,1:12:20.47:122,20,0	0/1:5,1:6:25.34:69,0,25
chr10	90865083	.	CAT	C	4359.14	PASS	AB=0.840;AC=36;AF=0.692;AN=52;BaseQRankSum=15.530;DP=637;FS=2.130;HRun=0;HaplotypeScore=286.5479;InbreedingCoeff=0.5356;MQ=58.73;MQ0=13;MQRankSum=-11.592;QD=10.21;ReadPosRankSum=0.638;VQSLOD=4.1219;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:99:0,120,1930	0/0:11,0:11:29.78:0,30,443	0/1:49,0:21:64.50:64,0,132	0/0:58,0:31:4.84:0,5,552	1/1:18,13:31:34.42:283,34,0	1/1:5,2:7:7.46:42,7,0	1/1:12,5:17:12.54:98,13,0	1/1:12,0:11:18.96:160,19,0	1/1:3,2:5:11.94:97,12,0	1/1:33,7:39:63.80:589,64,0	1/1:19,16:35:70.62:529,71,0	1/1:3,2:5:6:55,6,0	0/1:6,5:11:0.45:133,0,0	1/1:4,2:5:5.97:48,6,0	0/0:46,0:44:99:0,129,2119	0/1:10,5:14:7.28:70,0,7	0/0:40,0:40:99:0,103,1970	./.	0/0:8,0:7:1.39:0,1,18	1/1:29,15:43:58.74:409,59,0	1/1:1,0:1:2.92:17,3,0	1/1:22,15:37:78.96:586,79,0	1/1:26,14:40:60.57:423,61,0	./.	1/1:21,9:30:42.51:266,43,0	0/1:22,2:24:27.65:224,0,28	1/1:7,5:12:20.94:179,21,0	1/1:2,4:6:12.59:87,13,0
chr10	90865087	.	C	CAG	5162.45	PASS	AB=0.982;AC=30;AF=0.536;AN=56;BaseQRankSum=7.153;DP=671;FS=6.838;HRun=0;HaplotypeScore=300.3481;InbreedingCoeff=0.0058;MQ=65.26;MQ0=12;MQRankSum=-8.709;QD=11.20;ReadPosRankSum=0.664;VQSLOD=3.7244;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:99:0,114,1596	0/0:12,0:12:30.07:0,30,411	0/1:53,0:30:32.39:32,0,296	0/0:59,0:37:34.33:0,34,634	0/1:33,0:33:37.99:313,0,38	0/1:8,0:8:8.96:89,0,9	1/1:17,0:17:16.57:206,17,0	1/1:13,0:12:29.97:328,30,0	0/1:7,0:7:6.70:36,0,7	0/1:44,0:43:99:416,0,173	1/1:35,1:36:6.70:629,7,0	1/1:5,0:5:5.99:47,6,0	1/1:11,0:11:2.09:86,2,0	1/1:6,0:5:6.01:66,6,0	0/0:47,0:45:99:0,129,1811	1/1:13,2:14:26.87:288,27,0	0/0:41,0:41:99:0,120,1662	1/1:2,0:2:5.93:40,6,0	1/1:7,0:6:3.01:39,3,0	0/1:46,0:45:63.24:384,0,63	0/0:1,0:1:2.92:0,3,17	0/1:37,1:38:45.04:695,0,45	0/1:40,1:41:43.16:468,0,43	0/0:1,0:1:0:0,0,0	0/1:29,2:31:53.16:490,0,53	0/1:24,2:26:82.50:295,0,83	0/1:12,0:12:16.69:66,0,17	0/1:8,0:8:13.06:148,0,13
chr10	90865091	.	C	CAGAAGT	3117.52	PASS	AB=0.946;AC=17;AF=0.304;AN=56;BaseQRankSum=8.139;DP=701;FS=10.944;HRun=0;HaplotypeScore=360.0637;InbreedingCoeff=-0.3241;MQ=69.65;MQ0=10;MQRankSum=-9.307;QD=8.36;ReadPosRankSum=-4.263;VQSLOD=0.6239;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:99:0,111,2673	0/0:13,0:13:33.11:0,33,779	0/0:62,0:37:59.29:0,59,934	0/0:68,0:41:37.12:0,37,1231	0/1:32,1:33:35.84:36,0,345	0/1:8,1:9:7.55:8,0,38	0/0:18,0:18:17.53:0,18,116	0/0:22,0:21:50.95:0,51,578	0/1:7,1:8:6.04:6,0,82	0/1:41,4:46:99:1199,0,1036	0/1:35,3:38:99:179,0,664	0/1:5,0:5:9:9,0,61	0/1:12,1:13:87.89:88,0,234	0/0:5,1:5:5.93:0,6,62	0/0:45,0:43:99:0,129,3020	0/1:16,0:15:64.31:64,0,307	0/0:39,0:39:99:0,117,2769	0/0:3,0:3:9.01:0,9,101	0/0:8,0:8:7.55:0,8,83	0/1:42,4:45:99:323,0,346	1/1:2,0:2:3.01:40,3,0	0/1:35,2:37:99:248,0,628	0/1:37,2:39:99:190,0,275	0/0:1,0:1:3.01:0,3,34	0/1:28,4:32:99:250,0,446	0/1:24,1:25:99:404,0,567	0/1:12,0:12:99:157,0,181	0/1:11,0:11:72.68:73,0,253
chr10	90865147	.	A	AAC	315.08	PASS	AB=0.983;AC=13;AF=0.232;AN=56;BaseQRankSum=6.980;DP=679;FS=1.365;HRun=0;HaplotypeScore=298.9048;InbreedingCoeff=-0.0881;MQ=50.51;MQ0=4;MQRankSum=-6.988;QD=1.91;ReadPosRankSum=0.603;VQSLOD=1.5891;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:40:99:0,111,1461	0/0:10,0:10:27.08:0,27,347	0/0:49,0:32:58.98:0,59,748	0/0:46,0:33:57.88:0,58,721	0/0:28,0:28:3.64:0,4,109	0/1:10,0:10:32.64:39,0,33	0/0:15,0:15:9.01:0,9,58	0/0:23,0:19:37.19:0,37,280	0/1:7,0:7:3.72:30,0,4	0/0:59,0:59:79.05:0,79,1478	0/0:34,0:34:62.03:0,62,727	0/1:7,0:6:6.72:30,0,7	0/0:18,0:18:40.17:0,40,487	1/1:8,0:7:2.47:20,2,0	0/0:44,0:44:99:0,120,1574	0/0:31,0:31:70.48:0,70,888	0/0:33,0:33:90.16:0,90,1120	0/0:7,0:7:18.04:0,18,215	0/1:12,0:10:5.87:6,0,121	0/1:31,0:31:83.96:84,0,186	0/1:13,4:17:29.18:93,0,29	0/0:38,0:38:72.91:0,73,821	0/1:27,0:27:55.87:56,0,91	0/1:9,0:9:20.47:30,0,20	0/0:39,0:39:42.18:0,42,758	0/1:16,0:15:10.03:10,0,95	0/1:9,0:9:18.72:19,0,48	0/1:12,0:12:47.17:47,0,57
chr10	90865149	.	C	CACACAG	3546.10	PASS	AB=0.884;AC=17;AF=0.304;AN=56;BaseQRankSum=1.487;DP=673;FS=8.390;HRun=0;HaplotypeScore=323.2160;InbreedingCoeff=-0.0939;MQ=47.41;MQ0=6;MQRankSum=-8.053;QD=15.55;ReadPosRankSum=-2.753;VQSLOD=1.4738;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,2420	0/0:9,0:9:27.08:0,27,558	0/0:51,0:30:63.16:0,63,1039	0/0:43,0:28:50.38:0,50,1049	0/1:25,3:28:22.44:237,0,22	0/1:8,2:10:12.82:283,0,13	0/1:15,0:15:14.23:14,0,56	0/1:21,0:17:83.45:83,0,208	1/1:5,2:7:10.65:214,11,0	0/0:58,0:58:77.10:0,77,1508	0/0:34,0:34:27.78:0,28,863	0/1:5,2:6:13.75:205,0,14	0/0:18,0:18:28.31:0,28,587	1/1:7,1:7:8.06:120,8,0	0/0:46,0:46:99:0,120,2649	0/0:30,0:30:69.26:0,69,997	0/0:32,0:32:93.25:0,93,1862	0/0:7,0:7:17.98:0,18,250	0/1:7,1:6:91.16:91,0,123	0/1:24,7:31:99:772,0,203	0/1:17,1:18:36.94:37,0,73	0/0:38,0:38:42:0,42,959	0/1:22,5:27:67.20:554,0,67	0/1:8,3:11:63.28:184,0,63	0/0:38,0:39:43.33:0,43,997	0/1:16,0:15:54.48:117,0,54	0/1:8,1:9:17.46:232,0,17	0/1:9,3:12:8.30:401,0,8
chr10	90865154	.	A	AG	1364.74	PASS	AB=0.855;AC=18;AF=0.321;AN=56;BaseQRankSum=12.705;DP=631;FS=69.099;HRun=0;HaplotypeScore=257.7024;InbreedingCoeff=-0.1637;MQ=44.85;MQ0=6;MQRankSum=-9.197;QD=4.58;ReadPosRankSum=-2.555;VQSLOD=0.6701;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,1699	0/0:11,0:11:33.10:0,33,444	0/0:48,0:22:63.21:0,63,867	0/0:36,0:23:61.24:0,61,845	0/1:18,6:24:65.47:65,0,127	0/1:7,2:9:21.12:85,0,21	0/1:8,3:11:36.14:76,0,36	0/1:13,5:14:99:187,0,113	0/1:5,2:7:5.45:84,0,5	0/1:48,0:56:50.11:50,0,622	0/1:24,0:31:51.76:52,0,348	1/1:4,3:6:8.02:95,8,0	0/0:16,0:18:6.43:0,6,289	1/1:4,2:5:7.27:92,7,0	0/0:44,0:44:99:0,132,1825	0/0:27,0:29:36.40:0,36,485	0/0:35,0:35:99:0,102,1400	0/0:7,0:7:17.81:0,18,124	0/0:9,0:7:12.47:0,12,90	0/1:22,4:26:99:154,0,140	0/0:19,0:19:17.92:0,18,111	0/0:30,0:33:22.54:0,23,478	0/1:17,6:23:49.24:212,0,49	0/1:10,1:11:15.61:46,0,16	0/1:31,0:37:61.80:62,0,463	0/1:11,1:11:29.98:30,0,93	0/1:5,3:8:28.77:122,0,29	0/1:8,3:11:42.09:118,0,42
chr10	90865159	.	C	CAT	1124.52	PASS	AB=0.958;AC=21;AF=0.375;AN=56;BaseQRankSum=12.659;DP=657;FS=53.459;HRun=0;HaplotypeScore=297.3135;InbreedingCoeff=-0.1520;MQ=43.80;MQ0=12;MQRankSum=-10.864;QD=3.06;ReadPosRankSum=-1.803;VQSLOD=1.0730;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,106,1843	0/0:10,0:10:29.89:0,30,425	0/0:45,0:18:48:0,48,614	0/0:33,0:20:55.41:0,55,767	0/1:31,0:31:26.83:27,0,102	0/1:9,0:9:13.34:55,0,13	0/1:13,0:13:30.56:31,0,58	0/1:20,0:14:99:167,0,122	0/1:9,0:9:9.24:50,0,9	0/1:48,8:56:99:225,0,1607	0/1:23,6:29:70.35:70,0,751	1/1:8,0:7:10.73:64,11,0	0/1:17,2:19:10.27:10,0,563	1/1:7,0:6:7.98:40,8,0	0/0:46,0:46:99:0,135,1973	0/0:28,2:30:19.71:0,20,1022	0/0:36,0:36:99:0,105,1447	0/0:8,0:8:21.02:0,21,285	0/0:13,0:9:9.56:0,10,147	0/1:27,0:27:95.85:96,0,176	0/0:22,0:22:4.45:0,4,52	0/1:30,3:33:22.09:22,0,886	0/1:23,0:23:52.39:114,0,52	0/1:15,0:15:19.43:33,0,19	0/1:31,6:37:99:105,0,887	0/1:12,0:11:26.40:26,0,118	1/1:8,0:8:13.68:86,14,0	0/1:11,0:11:7.18:77,0,7
chr10	90865176	.	A	AAC	1544.73	PASS	AB=0.942;AC=17;AF=0.304;AN=56;BaseQRankSum=4.355;DP=584;FS=3.473;HRun=0;HaplotypeScore=260.2908;InbreedingCoeff=-0.1561;MQ=42.64;MQ0=45;MQRankSum=-8.101;QD=4.84;ReadPosRankSum=3.124;VQSLOD=2.6789;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:50:99:0,120,1545	0/0:13,0:13:30.09:0,30,386	0/0:40,0:5:3.01:0,3,40	0/0:39,0:12:11.86:0,12,116	0/1:23,2:25:25.36:25,0,236	0/0:6,0:6:5.95:0,6,47	0/1:7,1:8:37.53:38,0,98	0/1:21,0:17:51.58:52,0,182	0/0:7,0:7:15:0,15,137	0/1:43,0:42:28.79:29,0,451	0/1:25,2:28:99:188,0,249	0/0:6,0:5:6.90:0,7,59	0/1:17,0:16:64.62:65,0,155	0/0:4,0:4:7.56:0,8,61	0/0:46,0:46:99:0,117,1554	0/1:24,0:23:84.92:107,0,85	0/0:34,0:35:79.32:0,79,1107	0/1:8,0:8:24.39:24,0,84	1/1:10,2:8:14.24:130,14,0	0/1:18,4:22:99:172,0,113	1/1:13,9:22:40.49:488,40,0	0/1:24,1:25:99:141,0,187	0/1:16,1:17:35.12:35,0,178	0/1:13,4:17:71.59:72,0,85	0/1:29,1:30:99:148,0,272	0/0:7,0:7:8.97:0,9,92	0/0:5,0:5:12.02:0,12,118	0/0:7,0:7:21.05:0,21,228
chr10	90865184	.	G	GAC	5306.39	PASS	AB=0.753;AC=18;AF=0.346;AN=52;BaseQRankSum=2.602;DP=565;FS=3.462;HRun=0;HaplotypeScore=235.9246;InbreedingCoeff=-0.0626;MQ=41.45;MQ0=56;MQRankSum=-7.968;QD=18.82;ReadPosRankSum=-0.678;VQSLOD=4.7081;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,121,1539	0/0:12,0:12:27.09:0,27,351	./.	./.	0/1:18,4:22:59.28:59,0,243	0/0:6,0:6:5.04:0,5,34	0/1:7,1:8:28.68:29,0,83	0/0:17,1:14:23.98:0,24,228	0/0:6,0:6:15:0,15,137	0/1:23,15:37:99:709,0,206	0/1:11,14:25:99:603,0,126	0/1:6,0:5:6.01:6,0,48	0/1:9,7:15:52.52:373,0,53	0/0:6,0:6:6.01:0,6,57	0/0:47,0:47:99:0,114,1435	0/1:10,10:19:31.51:702,0,32	0/0:33,0:33:62.98:0,63,1060	1/1:5,4:9:15.02:225,15,0	1/1:6,5:5:15.05:244,15,0	0/1:15,4:19:99:168,0,112	1/1:5,14:23:55.72:733,56,0	0/1:11,11:22:91.99:510,0,92	0/1:13,3:16:99:110,0,156	0/1:4,12:17:78.40:201,0,78	0/1:15,14:29:99:634,0,138	0/0:4,0:5:8.89:0,9,85	0/0:4,0:4:9.01:0,9,83	0/0:9,0:9:8.46:0,8,81
chr10	90865200	.	CAGA	C	3599.59	PASS	AB=0.716;AC=20;AF=0.357;AN=56;BaseQRankSum=11.903;DP=517;FS=68.571;HRun=0;HaplotypeScore=233.5267;InbreedingCoeff=-0.4665;MQ=40.66;MQ0=55;MQRankSum=-8.930;QD=14.69;ReadPosRankSum=5.386;VQSLOD=0.9383;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,123,3187	0/0:10,0:10:24.08:0,24,567	0/0:46,0:2:3.01:0,3,70	0/0:40,1:5:3.51:0,4,138	0/1:9,12:21:96.59:486,0,97	1/1:1,2:3:3.01:53,3,0	0/1:3,5:8:77.76:78,0,94	0/1:8,4:9:93.60:94,0,130	0/1:1,4:5:22.81:194,0,23	0/1:18,11:29:99:531,0,663	0/1:15,7:22:99:267,0,285	0/1:3,4:6:50.14:96,0,50	0/1:8,3:10:99:128,0,198	0/1:4,3:7:99:139,0,103	0/0:44,0:44:99:0,126,2828	0/1:10,4:13:99:118,0,331	0/0:35,0:35:97.26:0,97,2211	0/0:6,0:6:17.71:0,18,151	0/0:11,1:8:21:0,21,345	0/1:7,7:14:99:271,0,203	0/0:29,0:27:40.80:0,41,505	0/1:12,5:17:99:215,0,252	0/1:3,9:12:59.93:288,0,60	0/1:15,1:16:23.16:23,0,286	0/1:14,8:22:99:305,0,381	0/1:7,2:8:34.78:35,0,276	0/1:3,3:6:43.58:146,0,44	0/1:7,3:10:99:134,0,217
chr10	90865205	.	CACACAG	C	2409.05	PASS	AB=0.887;AC=16;AF=0.286;AN=56;BaseQRankSum=4.042;DP=520;FS=37.728;HRun=0;HaplotypeScore=256.6646;InbreedingCoeff=-0.2179;MQ=41.46;MQ0=55;MQRankSum=-8.943;QD=10.34;ReadPosRankSum=-3.599;VQSLOD=0.9876;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:99:0,141,4025	0/0:10,0:10:24.06:0,24,675	0/0:45,0:3:7.22:0,7,124	0/0:46,0:5:6.30:0,6,254	0/1:21,1:22:45.81:46,0,291	0/0:3,0:3:3.71:0,4,78	0/0:9,0:9:11:0,11,124	0/0:11,0:7:13.19:0,13,117	0/1:6,0:6:3.63:4,0,39	0/1:26,2:28:99:158,0,280	0/1:19,2:21:68.16:68,0,73	0/0:7,0:6:14.14:0,14,137	0/1:7,3:9:28.20:162,0,28	0/1:7,0:7:12.15:12,0,144	0/0:42,0:42:99:0,123,3658	0/1:9,5:13:21.74:252,0,22	0/0:35,0:35:89.86:0,90,2722	1/1:3,3:6:15.05:295,15,0	0/1:12,1:8:76.58:159,0,77	0/0:14,0:14:25.27:0,25,209	0/1:19,8:25:5.21:675,0,5	0/1:14,3:17:35.12:156,0,35	0/1:11,1:12:53.75:54,0,104	0/1:14,4:18:99:175,0,157	0/1:17,5:22:25.75:329,0,26	0/0:8,0:7:17.03:0,17,202	0/0:7,0:7:17.83:0,18,175	0/1:10,0:10:25.05:25,0,201
chr10	90865211	.	GAC	G	1189.28	PASS	AB=0.821;AC=21;AF=0.375;AN=56;BaseQRankSum=3.841;DP=520;FS=46.784;HRun=0;HaplotypeScore=235.8204;InbreedingCoeff=-0.0755;MQ=41.22;MQ0=48;MQRankSum=-8.922;QD=5.33;ReadPosRankSum=-5.182;VQSLOD=0.9666;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,1:49:83.67:0,84,1765	0/0:11,0:11:21.04:0,21,308	0/0:47,0:3:6.02:0,6,79	0/0:52,0:7:15.43:0,15,195	0/1:16,4:23:99:112,0,124	0/0:3,0:3:5.97:0,6,59	0/1:6,2:8:28.80:38,0,29	0/0:13,0:10:2.65:0,3,54	0/0:4,2:6:11.08:0,11,74	0/0:23,0:23:5.26:0,5,175	0/0:14,0:15:4.84:0,5,71	0/1:5,3:7:25.20:86,0,25	0/1:10,0:9:13.38:13,0,30	0/1:3,4:7:16.06:124,0,16	0/0:41,0:41:99:0,102,1619	0/1:13,0:12:13.53:14,0,30	0/0:35,0:36:72.11:0,72,1244	1/1:4,0:5:13.92:65,14,0	1/1:10,1:8:5.59:36,6,0	0/1:11,2:14:57.36:57,0,79	1/1:21,3:25:15.19:130,15,0	0/1:17,0:17:7.65:8,0,60	0/1:11,1:12:28.77:29,0,68	0/1:10,4:18:12.81:169,0,13	0/1:20,0:20:23.93:24,0,92	1/1:3,4:7:14.88:159,15,0	0/1:5,5:10:57.49:123,0,57	0/1:3,5:10:27.28:174,0,27
chr10	90865214	.	ACAC	A	102.08	PASS	AB=0.971;AC=7;AF=0.125;AN=56;BaseQRankSum=3.885;DP=542;FS=24.796;HRun=0;HaplotypeScore=258.6095;InbreedingCoeff=0.0488;MQ=40.67;MQ0=43;MQRankSum=-5.395;QD=1.06;ReadPosRankSum=-1.786;VQSLOD=0.7416;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:99:0,144,3154	0/0:12,0:12:33.04:0,33,620	0/0:50,0:3:6.01:0,6,100	0/0:52,0:7:14.09:0,14,334	0/0:23,0:23:13.04:0,13,512	0/0:5,0:5:6.01:0,6,101	0/0:8,0:8:14.87:0,15,149	0/1:13,0:10:30.81:31,0,220	0/0:6,0:6:11.20:0,11,159	0/0:23,1:24:3.92:0,4,747	0/0:15,0:15:13.37:0,13,324	0/0:8,0:7:14.45:0,14,142	0/0:11,0:10:9.03:0,9,147	0/0:7,0:7:19.83:0,20,129	0/0:40,0:40:99:0,117,2700	0/0:12,0:11:15.05:0,15,203	0/0:37,0:37:99:0,105,2304	1/1:4,1:5:6.05:61,6,0	0/1:14,0:8:13.84:14,0,132	0/0:15,0:15:19.02:0,19,349	0/1:29,0:27:48.80:49,0,146	0/0:17,0:17:16.84:0,17,228	0/0:14,0:14:18.93:0,19,268	0/0:20,0:20:3.50:0,4,146	0/1:21,2:23:47.66:48,0,421	0/0:9,0:8:7.54:0,8,119	0/0:12,0:12:18.66:0,19,365	0/1:11,0:11:26.92:27,0,153
chr10	90865224	.	A	AAG	3435.22	PASS	AB=0.772;AC=18;AF=0.321;AN=56;BaseQRankSum=10.715;DP=531;FS=33.259;HRun=0;HaplotypeScore=237.0272;InbreedingCoeff=-0.3190;MQ=40.64;MQ0=38;MQRankSum=-8.508;QD=15.61;ReadPosRankSum=-5.649;VQSLOD=1.0614;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:99:0,135,2086	0/0:11,0:11:30.10:0,30,453	0/0:48,0:3:8.81:0,9,82	0/0:53,0:7:18.94:0,19,249	0/1:13,10:24:29.74:406,0,30	0/1:3,1:4:42.73:54,0,43	0/1:9,1:10:48.79:49,0,107	0/0:13,2:11:25.56:0,26,316	0/1:6,4:10:16.79:234,0,17	0/1:13,6:19:99:372,0,155	1/1:6,5:11:16.86:280,17,0	0/1:4,3:6:83.38:100,0,83	0/1:6,2:8:32.82:121,0,33	0/1:9,3:12:70.27:165,0,70	0/0:39,0:39:99:0,111,1792	0/1:9,3:11:34.04:121,0,34	0/0:36,0:36:96.31:0,96,1534	0/0:7,0:7:17.89:0,18,164	0/0:13,0:6:14.50:0,15,121	0/1:8,6:14:35.47:295,0,35	0/0:27,0:25:14.80:0,15,187	0/1:6,4:10:34.13:224,0,34	0/1:10,5:15:34.49:238,0,34	0/1:16,1:17:23.18:23,0,186	0/1:15,7:22:50.88:387,0,51	0/0:14,1:13:22.86:0,23,217	0/1:9,5:14:99:233,0,166	0/1:8,3:11:99:131,0,147
chr10	90865230	.	A	AAG	2236.71	PASS	AB=0.831;AC=16;AF=0.286;AN=56;BaseQRankSum=9.217;DP=528;FS=39.623;HRun=0;HaplotypeScore=241.7383;InbreedingCoeff=-0.4155;MQ=40.81;MQ0=39;MQRankSum=-7.196;QD=9.99;ReadPosRankSum=-6.309;VQSLOD=1.1628;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:99:0,144,2109	0/0:10,0:10:27.09:0,27,396	0/0:45,0:3:5.83:0,6,53	0/0:49,0:7:4.56:0,5,203	0/1:18,9:28:65.21:456,0,65	0/1:5,0:5:30.61:31,0,40	0/0:12,0:12:8.94:0,9,95	0/0:12,1:9:22.31:0,22,283	0/1:9,4:13:13.07:235,0,13	0/1:15,3:18:99:223,0,303	0/1:10,3:13:10.11:76,0,10	0/1:6,2:7:73.61:74,0,94	0/1:5,2:7:53.05:98,0,53	0/1:10,3:13:87.27:121,0,87	0/0:39,0:39:99:0,111,1693	0/1:9,2:11:51.70:98,0,52	0/0:30,0:30:84.26:0,84,1259	0/0:7,0:7:21.05:0,21,255	0/0:12,0:5:15.01:0,15,154	0/1:9,5:14:48.68:271,0,49	0/0:20,0:19:26.37:0,26,224	0/1:5,4:9:72.43:154,0,72	0/1:13,2:15:41.02:85,0,41	0/0:16,1:17:3.55:0,4,209	0/1:18,4:22:99:124,0,183	0/1:17,0:16:46.62:47,0,245	0/1:14,3:17:99:234,0,216	0/1:12,2:14:67.43:67,0,193
chr10	90865248	.	G	GAC	6445.13	PASS	AB=0.688;AC=29;AF=0.537;AN=54;BaseQRankSum=10.904;DP=529;FS=140.906;HRun=0;HaplotypeScore=183.2140;InbreedingCoeff=-0.1731;MQ=40.89;MQ0=62;MQRankSum=-11.998;QD=20.93;ReadPosRankSum=-1.004;VQSLOD=1.4051;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,101,1482	0/0:6,0:6:12.01:0,12,139	./.	0/0:42,0:3:3.01:0,3,36	0/1:18,5:23:99:116,0,268	0/1:1,4:5:23.07:188,0,23	0/1:16,4:20:99:170,0,151	0/1:9,4:9:54.73:96,0,55	0/1:10,7:17:78.42:358,0,78	0/1:7,10:16:26.31:512,0,26	1/1:0,6:7:12.04:202,12,0	0/1:7,5:12:34.02:219,0,34	1/1:1,4:5:12.04:203,12,0	0/1:4,8:12:46.22:375,0,46	0/0:45,0:45:99:0,114,1430	1/1:2,9:11:24.08:406,24,0	0/0:34,0:34:84.22:0,84,1048	1/1:5,3:8:1.76:98,2,0	1/1:8,2:4:3.01:51,3,0	0/1:7,5:12:99:227,0,123	1/1:11,4:17:13.95:206,14,0	0/1:4,5:9:4.64:188,0,5	0/1:13,6:20:99:315,0,181	0/1:9,6:16:4.10:150,0,4	1/1:3,10:13:24.34:548,24,0	0/1:10,15:24:44.83:873,0,45	0/1:10,10:20:99:476,0,178	0/1:5,10:15:51.77:469,0,52
chr10	90865271	.	CACAG	C	12350.35	PASS	AB=0.635;AC=27;AF=0.482;AN=56;BaseQRankSum=11.007;DP=706;FS=55.697;HRun=0;HaplotypeScore=223.6383;InbreedingCoeff=-0.0772;MQ=42.74;MQ0=47;MQRankSum=-10.969;QD=26.22;ReadPosRankSum=-0.082;VQSLOD=2.8583;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,117,2449	0/0:3,0:3:9.02:0,9,178	0/0:41,0:7:18.01:0,18,326	0/0:45,0:6:17.82:0,18,272	0/1:13,12:25:99:331,0,800	0/1:4,10:14:99:268,0,211	0/1:31,6:37:99:206,0,980	0/0:27,0:27:81.24:0,81,2038	0/1:3,24:27:99:900,0,178	1/1:3,28:30:68.39:1238,68,0	1/1:1,12:13:17.85:295,18,0	0/1:6,15:21:99:461,0,295	1/1:0,13:13:30.10:547,30,0	0/1:6,16:22:89.11:728,0,89	0/0:41,0:39:99:0,111,2390	1/1:0,24:24:60.12:1055,60,0	0/0:34,0:34:84.84:0,85,2013	0/1:4,7:11:9.93:291,0,10	0/1:11,8:15:99:286,0,460	0/1:8,12:20:99:351,0,503	0/1:18,5:22:47.56:325,0,48	1/1:1,13:14:29.93:502,30,0	0/1:13,17:30:99:564,0,664	0/1:2,23:25:41.62:410,0,42	1/1:2,15:17:46.04:831,46,0	0/1:11,28:39:99:1335,0,378	0/1:10,17:27:99:790,0,643	0/1:6,13:19:99:639,0,302
chr10	90865275	.	GACACAC	G	5792.56	PASS	AB=0.964;AC=29;AF=0.518;AN=56;BaseQRankSum=12.379;DP=717;FS=50.650;HRun=0;HaplotypeScore=265.1776;InbreedingCoeff=-0.0842;MQ=42.90;MQ0=42;MQRankSum=-9.665;QD=11.38;ReadPosRankSum=-1.160;VQSLOD=2.6530;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:41:99:0,102,2902	0/0:3,0:3:9.01:0,9,220	0/0:41,0:8:21.07:0,21,513	0/0:48,0:7:20.74:0,21,433	0/1:24,1:25:99:159,0,937	0/1:13,0:13:99:108,0,283	0/1:28,11:39:99:163,0,1208	0/1:31,0:32:29.08:29,0,2601	0/1:27,0:27:99:376,0,246	1/1:32,1:32:82.89:732,83,0	1/1:14,0:14:17.36:154,17,0	0/1:20,0:21:99:145,0,382	1/1:14,0:14:29.88:248,30,0	0/1:20,1:22:88.65:324,0,89	0/0:41,0:40:96.28:0,96,2923	1/1:24,0:24:55.40:443,55,0	0/0:32,0:32:81.23:0,81,2389	1/1:9,2:11:21:257,21,0	0/1:20,0:16:99:106,0,687	0/1:20,0:20:99:134,0,619	0/1:20,1:22:98.29:237,0,98	1/1:14,0:14:26.10:198,26,0	0/1:30,0:30:99:227,0,809	0/1:24,0:25:71.15:235,0,71	1/1:18,0:18:47.92:478,48,0	0/1:38,0:38:99:525,0,514	0/1:28,0:28:99:273,0,840	0/1:19,0:19:99:238,0,389
chr10	90866215	.	AGTGTGTGTGTGTGTGTGTGTGTGT	A	2119.96	PASS	AC=14;AF=0.280;AN=50;BaseQRankSum=5.429;DP=581;FS=10.002;HRun=0;HaplotypeScore=318.8385;InbreedingCoeff=0.7850;MQ=57.29;MQ0=14;MQRankSum=-2.733;QD=17.52;ReadPosRankSum=-1.141;VQSLOD=0.8699;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:60.21:0,60,4969	./.	./.	./.	0/0:10,0:12:9.03:0,9,410	0/0:15,0:15:21.07:0,21,1091	0/0:28,0:28:24.08:0,24,1310	0/0:34,0:34:27.09:0,27,950	0/0:22,0:25:45.15:0,45,2518	1/1:18,7:25:8.93:278,9,0	1/1:9,4:13:6.02:317,6,0	0/0:22,0:22:33.11:0,33,1573	1/1:9,3:11:6.02:375,6,0	0/0:19,0:20:36.09:0,36,1793	0/0:18,0:16:18.06:0,18,1418	1/1:16,7:23:9.03:562,9,0	0/0:35,0:33:48.24:0,48,3101	1/1:17,4:21:0.89:184,1,0	0/0:16,0:15:9.92:0,10,426	0/0:17,0:17:15.05:0,15,727	0/0:30,0:28:21.54:0,22,1008	1/1:7,1:8:3.01:187,3,0	0/0:10,0:10:9.03:0,9,545	0/0:29,0:34:48.64:0,49,2382	1/1:16,3:19:6.02:375,6,0	0/0:19,0:19:30.10:0,30,1248	0/0:17,0:19:27.09:0,27,1497	0/0:12,0:11:12.04:0,12,687
chr10	90867540	.	AT	A	17266.76	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=8.293;DP=643;FS=0.697;HRun=2;HaplotypeScore=65.2947;InbreedingCoeff=0.9963;MQ=90.61;MQ0=0;MQRankSum=-5.341;QD=35.97;ReadPosRankSum=2.481;VQSLOD=5.3971;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,2096	0/0:5,0:5:15.05:0,15,225	0/0:18,0:18:54.18:0,54,783	0/0:36,0:36:77.96:0,78,1405	1/1:1,23:24:66.11:833,66,0	1/1:1,15:16:39.13:506,39,0	1/1:0,31:31:90.29:1168,90,0	1/1:1,24:25:69.22:896,69,0	1/1:0,33:33:93.30:1207,93,0	1/1:0,23:23:69.20:880,69,0	1/1:0,14:14:42.14:545,42,0	1/1:0,15:15:42.14:544,42,0	1/1:0,24:24:66.21:856,66,0	1/1:0,26:26:78.25:1013,78,0	0/0:37,0:37:99:0,111,1662	1/1:0,20:20:51.17:662,51,0	0/0:19,0:19:57.19:0,57,854	1/1:0,15:15:42.14:545,42,0	1/1:0,16:16:48.16:623,48,0	1/1:0,19:19:54.18:701,54,0	1/1:0,33:33:84.27:1091,84,0	1/1:0,16:16:39.13:506,39,0	1/1:1,17:18:48.15:623,48,0	1/1:0,33:33:96.31:1246,96,0	1/1:0,17:17:48.16:623,48,0	1/1:0,22:22:66.13:835,66,0	1/1:0,32:32:81.26:1052,81,0	1/1:0,8:8:24.08:312,24,0
chr10	90867915	.	C	CG	372.29	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.800;DP=425;FS=1.029;HRun=5;HaplotypeScore=49.9990;InbreedingCoeff=0.7333;MQ=83.76;MQ0=1;MQRankSum=-0.574;QD=26.59;ReadPosRankSum=-0.498;VQSLOD=2.8518;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:54.13:0,54,578	0/0:3,0:3:6.01:0,6,64	0/0:26,0:21:34.44:0,34,318	0/0:22,0:18:14.27:0,14,198	0/0:10,0:10:27.06:0,27,282	0/0:11,0:11:30.01:0,30,307	0/0:17,0:17:50.15:0,50,514	0/0:16,0:16:29.96:0,30,287	0/0:14,0:14:26.66:0,27,235	0/0:18,0:18:36.07:0,36,374	0/0:9,0:9:21.01:0,21,212	0/0:19,0:19:50.84:0,51,513	0/0:10,0:10:22.60:0,23,245	0/0:14,0:14:30.06:0,30,314	0/0:14,0:14:38.68:0,39,388	1/1:1,13:14:36.12:467,36,0	0/0:23,0:23:63.16:0,63,674	0/0:17,0:17:45.11:0,45,481	0/0:15,0:15:36.06:0,36,376	0/0:7,0:7:15.04:0,15,160	0/0:16,0:16:45.08:0,45,465	0/0:16,0:16:48.09:0,48,494	0/0:17,0:17:48.08:0,48,486	0/0:20,0:20:54.12:0,54,569	0/0:9,0:9:12.02:0,12,129	0/0:18,0:18:48.10:0,48,501	0/0:23,0:23:55.67:0,56,589	0/0:4,0:4:3.01:0,3,32
chr10	90868238	.	CT	C	6264.64	PASS	AB=0.756;AC=45;AF=0.804;AN=56;BaseQRankSum=4.315;DP=530;FS=2.700;HRun=12;HaplotypeScore=65.6695;InbreedingCoeff=0.6964;MQ=72.45;MQ0=2;MQRankSum=-0.011;QD=13.95;ReadPosRankSum=2.775;VQSLOD=5.4948;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:26:63.83:0,64,618	0/0:6,0:6:12.01:0,12,111	0/1:16,2:15:16.70:17,0,154	0/1:9,1:10:0.04:0,0,91	1/1:4,12:17:31.64:238,32,0	0/1:4,14:19:17:241,0,17	1/1:3,15:18:8.41:248,8,0	1/1:7,20:27:32.31:434,32,0	1/1:5,15:20:32.83:255,33,0	1/1:9,20:31:54.77:406,55,0	1/1:3,10:13:14.84:116,15,0	1/1:2,10:12:23.88:186,24,0	1/1:3,8:11:23.89:186,24,0	1/1:5,23:28:62.59:478,63,0	0/0:14,1:15:35.97:0,36,343	1/1:2,15:17:41.84:325,42,0	0/0:31,2:34:43.34:0,43,758	1/1:2,22:24:59.77:464,60,0	1/1:6,13:20:40.03:284,40,0	1/1:4,11:15:13.19:211,13,0	1/1:2,12:14:26.89:209,27,0	1/1:1,15:17:37.24:269,37,0	1/1:4,15:19:20.90:162,21,0	1/1:4,14:18:35.83:279,36,0	1/1:4,17:21:14.40:295,14,0	1/1:3,17:21:43.82:331,44,0	1/1:2,16:18:14.37:292,14,0	1/1:4,14:19:34.90:339,35,0
chr10	90870298	.	G	GGA	1793.16	PASS	AB=0.891;AC=21;AF=0.375;AN=56;BaseQRankSum=0.495;DP=359;FS=1.283;HRun=0;HaplotypeScore=62.4169;InbreedingCoeff=-0.2537;MQ=57.42;MQ0=19;MQRankSum=-1.469;QD=8.58;ReadPosRankSum=2.448;VQSLOD=2.9852;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:41:62.82:0,63,1337	0/0:8,0:8:21.07:0,21,292	0/0:28,0:11:13.67:0,14,206	0/0:18,0:11:17.59:0,18,197	0/1:20,0:20:99:125,0,101	0/1:10,6:15:99:184,0,122	0/1:9,6:13:59.44:190,0,59	0/1:12,2:12:59.55:60,0,121	0/1:4,0:4:28.44:28,0,72	0/1:16,1:15:82.25:309,0,82	0/0:3,3:6:9.01:0,9,94	1/1:2,0:2:3.01:39,3,0	0/1:5,0:3:29.79:30,0,58	1/1:2,3:5:3.01:51,3,0	0/0:10,0:10:27.05:0,27,355	0/1:2,0:2:32.75:33,0,35	0/0:17,0:15:40.02:0,40,547	0/1:12,0:10:61.55:62,0,153	0/1:16,1:14:98.04:98,0,315	0/0:5,2:6:6.01:0,6,62	0/1:20,4:20:99:157,0,120	0/1:4,0:4:34.76:43,0,35	1/1:9,0:8:15.05:188,15,0	0/1:11,6:17:36.98:37,0,122	0/0:9,1:10:5.99:0,6,50	0/1:12,6:13:95.07:278,0,95	0/1:5,1:6:45.74:46,0,72	0/0:3,2:4:1.82:0,2,5
chr10	90870300	.	AG	A	1241.59	PASS	AB=0.873;AC=22;AF=0.393;AN=56;BaseQRankSum=3.337;DP=366;FS=3.553;HRun=2;HaplotypeScore=54.6896;InbreedingCoeff=-0.2957;MQ=57.20;MQ0=19;MQRankSum=-1.633;QD=5.75;ReadPosRankSum=0.893;VQSLOD=0.8473;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,109,1591	0/0:8,0:8:21.07:0,21,298	0/0:27,0:11:26.98:0,27,300	0/0:19,0:11:17.37:0,17,211	0/1:10,9:19:41.58:129,0,42	0/1:15,1:15:67.22:67,0,69	0/1:10,2:10:24:92,0,24	0/1:12,2:11:76.62:77,0,95	0/1:4,0:4:28.49:28,0,41	0/1:10,8:16:99:224,0,170	0/0:7,0:7:12.03:0,12,152	1/1:0,3:3:3.01:39,3,0	0/1:3,2:3:29.78:30,0,81	1/1:6,0:5:0.75:32,1,0	0/0:11,0:11:30.04:0,30,390	0/1:3,1:4:29.75:30,0,62	0/0:17,0:15:42.09:0,42,583	0/1:12,1:11:53.85:54,0,188	0/1:13,3:13:69.95:70,0,193	0/1:8,0:7:11.14:11,0,35	0/1:21,3:20:77.61:145,0,78	0/1:1,1:4:23.29:23,0,39	1/1:3,6:7:13.99:186,14,0	0/1:17,0:17:28.13:28,0,100	0/0:12,0:12:23.81:0,24,283	0/1:17,1:13:44.30:129,0,44	0/1:6,0:6:12.41:12,0,39	0/0:6,0:5:1.83:0,2,20
chr10	90870431	.	TGGAGCGCACCTC	T	872.16	PASS	AB=0.958;AC=15;AF=0.326;AN=46;BaseQRankSum=0.220;DP=153;FS=1.529;HRun=0;HaplotypeScore=77.7978;InbreedingCoeff=-0.2293;MQ=50.35;MQ0=2;MQRankSum=-2.692;QD=9.69;ReadPosRankSum=-2.912;VQSLOD=0.4368;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,2:16:99:189,0,105	0/1:4,0:4:15.16:27,0,15	0/0:8,0:1:3.01:0,3,40	0/0:11,0:5:0.39:0,0,55	0/1:6,0:6:5.49:5,0,35	./.	0/1:8,0:8:9.98:120,0,10	./.	0/1:4,0:4:0:0,0,0	0/1:10,0:8:30.65:92,0,31	./.	0/0:4,0:4:8.89:0,9,59	./.	0/0:4,0:2:2.96:0,3,19	0/1:5,0:5:12.36:21,0,12	0/0:2,0:2:5.91:0,6,38	0/1:6,0:6:40.92:132,0,41	0/1:3,2:5:13.92:179,0,14	0/0:4,0:4:10.89:0,11,54	./.	0/1:14,1:14:44.16:97,0,44	1/1:3,0:3:2.89:89,3,0	0/0:4,0:4:5.94:0,6,46	0/0:6,1:7:1.69:0,2,41	0/0:6,0:6:8.77:0,9,65	0/1:7,0:6:27.89:28,0,32	0/0:1,0:1:2.94:0,3,18	1/1:1,0:1:2.98:21,3,0
chr10	90870435	.	GC	G	719.31	PASS	AC=34;AF=0.944;AN=36;BaseQRankSum=-2.818;DP=100;FS=16.967;HRun=1;HaplotypeScore=61.2251;InbreedingCoeff=0.3080;MQ=63.05;MQ0=2;MQRankSum=-1.548;QD=8.88;ReadPosRankSum=1.204;VQSLOD=-0.3541;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,11:14:21.41:117,21,0	1/1:0,2:2:5.49:24,5,0	./.	0/0:8,0:6:5.25:0,5,49	1/1:0,4:4:8.22:36,8,0	./.	1/1:1,6:7:10.91:46,11,0	./.	./.	1/1:2,7:8:22.29:109,22,0	./.	1/1:0,2:2:5.49:24,5,0	./.	./.	1/1:0,4:4:11.45:61,11,0	./.	1/1:1,4:5:10.35:59,10,0	1/1:3,0:3:4.26:13,4,0	1/1:0,3:3:8.47:40,8,0	./.	1/1:7,3:9:14.47:87,14,0	1/1:0,2:2:5.60:26,6,0	1/1:0,2:2:5.36:22,5,0	1/1:2,3:5:7.17:27,7,0	1/1:0,2:2:5.49:24,5,0	1/1:2,4:5:14.37:82,14,0	./.	1/1:0,1:1:2.80:13,3,0
chr10	90870442	.	TC	T	1534.96	PASS	AC=36;AF=0.900;AN=40;BaseQRankSum=-0.557;DP=94;FS=7.544;HRun=2;HaplotypeScore=62.1299;InbreedingCoeff=0.4047;MQ=66.19;MQ0=0;MQRankSum=-3.102;QD=19.68;ReadPosRankSum=2.738;VQSLOD=3.3366;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,11:13:23.81:280,24,0	1/1:0,2:2:6.01:55,6,0	0/0:4,0:1:2.80:0,3,13	0/0:8,0:7:7.02:0,7,60	1/1:0,4:4:8.68:66,9,0	./.	1/1:0,6:6:12.01:110,12,0	1/1:0,2:2:5.98:49,6,0	./.	1/1:1,7:8:21.04:211,21,0	./.	1/1:1,2:3:6.01:55,6,0	./.	./.	1/1:0,4:4:12.02:118,12,0	./.	1/1:1,5:6:15.03:157,15,0	1/1:2,0:2:4.72:17,5,0	1/1:0,3:3:9.02:90,9,0	./.	1/1:1,6:7:9:88,9,0	1/1:0,2:2:6.01:57,6,0	1/1:0,2:2:6.01:55,6,0	1/1:2,3:5:7.82:59,8,0	1/1:0,2:2:6.01:56,6,0	1/1:2,4:5:9.01:88,9,0	./.	1/1:0,1:1:3:27,3,0
chr10	90870457	.	TGAA	T	160.64	PASS	AB=0.934;AC=11;AF=0.204;AN=54;BaseQRankSum=2.569;DP=202;FS=4.413;HRun=0;HaplotypeScore=91.5992;InbreedingCoeff=-0.1469;MQ=50.94;MQ0=3;MQRankSum=-1.218;QD=1.71;ReadPosRankSum=-0.539;VQSLOD=1.1132;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,1:17:29.14:29,0,627	0/0:2,0:2:5.95:0,6,88	0/0:14,0:7:21.04:0,21,436	0/0:17,0:10:18.01:0,18,313	0/0:8,0:8:17.23:0,17,342	0/0:4,0:4:12.04:0,12,256	0/1:11,1:12:19.40:19,0,494	0/1:10,2:11:72.38:72,0,465	0/1:6,0:6:18.64:19,0,93	0/1:12,1:13:54:54,0,526	0/0:1,0:1:3.01:0,3,66	0/0:5,0:5:12.47:0,12,228	0/0:4,0:2:3.01:0,3,66	1/1:3,0:1:2.98:22,3,0	0/0:9,0:9:26.98:0,27,476	0/0:3,0:3:9.03:0,9,184	0/0:8,0:8:17.97:0,18,267	0/1:2,1:3:56.26:56,0,61	0/0:7,0:7:18.04:0,18,377	0/1:4,0:3:5.46:5,0,33	0/1:18,0:19:13.45:13,0,424	0/1:4,0:4:5.13:5,0,75	0/0:3,0:3:9.03:0,9,212	0/0:10,0:10:5.75:0,6,203	0/0:3,0:3:8.99:0,9,150	0/0:9,0:8:18.06:0,18,393	./.	0/0:1,0:1:3.01:0,3,71
chr10	90870483	.	TGAA	T	99.91	PASS	AB=0.891;AC=7;AF=0.130;AN=54;BaseQRankSum=3.418;DP=249;FS=4.375;HRun=0;HaplotypeScore=89.9194;InbreedingCoeff=0.0433;MQ=48.31;MQ0=2;MQRankSum=-2.278;QD=1.61;ReadPosRankSum=3.454;VQSLOD=0.8897;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,3:18:34.33:34,0,768	0/0:4,0:4:8.99:0,9,161	0/0:20,1:13:38.42:0,38,708	0/0:18,2:10:18.53:0,19,387	0/0:8,0:8:19.57:0,20,334	0/0:5,0:5:14.64:0,15,292	0/0:12,0:12:33.11:0,33,721	0/0:25,0:22:48.16:0,48,1084	0/1:9,0:9:12.74:13,0,166	0/0:15,0:14:30.81:0,31,656	0/0:1,0:1:3.01:0,3,71	0/0:8,0:8:17.05:0,17,292	0/1:4,0:4:42.63:43,0,61	0/0:1,0:1:1.25:0,1,3	0/0:10,0:10:24.08:0,24,510	0/0:4,0:4:11.53:0,12,149	0/1:4,2:6:33.11:33,0,182	1/1:1,2:3:4.05:83,4,0	0/0:16,0:14:30.10:0,30,673	0/0:4,0:3:6.02:0,6,114	0/1:18,4:21:17.11:17,0,477	0/0:3,0:3:9.03:0,9,212	0/0:5,0:5:7.58:0,8,172	0/0:7,2:9:10.63:0,11,153	0/0:4,0:4:6.49:0,6,141	0/0:7,0:7:15.05:0,15,354	0/0:1,0:1:3.01:0,3,71	./.
chr10	90870497	.	G	GA	65.27	PASS	AB=0.919;AC=8;AF=0.148;AN=54;BaseQRankSum=4.600;DP=226;FS=3.320;HRun=0;HaplotypeScore=77.6643;InbreedingCoeff=0.1143;MQ=43.13;MQ0=1;MQRankSum=-1.170;QD=1.33;ReadPosRankSum=0.643;VQSLOD=1.1259;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:30.94:0,31,409	0/0:4,0:4:5.98:0,6,61	0/0:16,0:11:19.29:0,19,320	0/1:17,0:7:0.68:1,0,155	0/0:6,0:6:6.47:0,6,67	0/0:4,1:5:14.86:0,15,139	0/0:10,0:10:24.08:0,24,329	0/0:21,0:20:42.50:0,42,515	0/1:7,2:9:8.79:55,0,9	0/1:10,2:11:69.74:70,0,272	0/0:2,0:1:2.97:0,3,20	0/0:7,0:7:11.07:0,11,131	1/1:1,3:4:2.83:27,3,0	0/0:2,0:2:2.98:0,3,21	0/0:10,0:10:8.38:0,8,162	0/0:3,1:4:1.87:0,2,127	0/0:5,0:5:9.03:0,9,126	0/1:3,0:3:12.88:13,0,69	0/0:15,0:14:3.08:0,3,419	0/0:5,0:4:6.01:0,6,69	0/0:21,0:20:5.97:0,6,84	0/0:4,0:4:8.97:0,9,86	0/0:4,0:4:8.57:0,9,67	0/0:6,2:8:4.17:0,4,11	1/1:4,0:4:2.84:14,3,0	0/0:7,0:7:15.05:0,15,205	0/0:1,0:1:3.01:0,3,42	./.
chr10	90870510	.	G	GGA	278.81	PASS	AB=0.819;AC=10;AF=0.200;AN=50;BaseQRankSum=3.003;DP=166;FS=2.422;HRun=0;HaplotypeScore=57.6899;InbreedingCoeff=-0.0323;MQ=36.91;MQ0=1;MQRankSum=-1.654;QD=3.72;ReadPosRankSum=3.095;VQSLOD=1.8166;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:11.97:0,12,122	0/0:4,0:4:2.92:0,3,21	0/0:8,0:5:15.04:0,15,192	0/0:6,0:2:3.01:0,3,43	0/0:6,0:6:3.01:0,3,36	0/0:5,0:5:3.01:0,3,37	0/0:5,0:5:3.01:0,3,41	0/1:14,1:15:33.86:34,0,184	0/1:9,0:9:4.19:4,0,28	0/1:7,3:9:85.57:161,0,86	./.	0/0:3,3:6:3.01:0,3,43	1/1:4,0:4:2.37:8,2,0	0/0:2,0:2:3.01:0,3,41	0/1:5,4:9:38.68:47,0,39	0/1:1,3:4:18.23:120,0,18	0/0:4,0:4:3.45:0,3,23	0/0:2,0:2:3:0,3,29	0/0:9,0:8:21.03:0,21,260	0/0:4,1:4:4.26:0,4,44	0/1:16,1:16:0:0,0,0	0/0:3,0:3:3:0,3,25	0/0:2,0:2:5.73:0,6,34	1/1:7,0:7:2.94:18,3,0	./.	0/0:5,0:5:8.99:0,9,97	0/0:1,0:1:3.01:0,3,41	./.
chr10	90871429	.	G	GAT	1662.80	PASS	AB=0.897;AC=16;AF=0.286;AN=56;BaseQRankSum=13.034;DP=380;FS=75.745;HRun=0;HaplotypeScore=147.1623;InbreedingCoeff=-0.4422;MQ=42.97;MQ0=0;MQRankSum=-5.793;QD=6.55;ReadPosRankSum=2.143;VQSLOD=0.1417;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:19.34:19,0,342	0/1:8,3:11:99:173,0,130	0/0:7,0:4:14.98:0,15,193	0/0:5,0:3:9.50:0,10,147	0/0:10,1:11:1.24:0,1,73	0/1:14,1:15:99:177,0,293	0/1:14,0:14:9.39:9,0,380	0/0:23,0:23:6.72:0,7,690	0/0:20,0:20:15.36:0,15,664	0/0:12,1:13:5.46:0,5,276	0/1:14,2:16:36.63:37,0,132	0/1:12,2:14:99:135,0,369	0/0:13,1:15:30.23:0,30,336	0/1:12,1:13:34.04:34,0,191	0/1:21,0:21:99:100,0,405	0/1:20,1:21:99:139,0,534	0/0:7,0:7:18.06:0,18,292	0/0:4,0:4:12:0,12,156	0/0:4,0:4:9.03:0,9,147	0/1:16,4:20:99:239,0,120	0/0:9,0:9:12.04:0,12,184	0/1:8,5:13:63.78:172,0,64	0/1:18,5:23:71.27:71,0,307	0/0:8,0:8:12.50:0,12,171	0/1:20,2:22:99:241,0,317	0/1:20,0:20:99:118,0,550	0/1:10,1:11:69.27:69,0,255	0/1:5,2:7:82.35:82,0,106
chr10	90873318	.	T	TGGAGTCAGATCTCTC	1550.15	PASS	AB=0.800;AC=23;AF=0.958;AN=24;BaseQRankSum=-1.138;DP=35;FS=0.000;HRun=0;HaplotypeScore=19.0315;InbreedingCoeff=-0.2003;MQ=126.29;MQ0=0;MQRankSum=-0.899;QD=64.59;ReadPosRankSum=-0.300;VQSLOD=2.7010;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:3:9.03:117,9,0	./.	1/1:2,1:4:12.04:661,12,0	0/1:3,0:4:42.10:193,0,42	./.	1/1:1,0:1:3.01:50,3,0	1/1:3,0:3:3.01:41,3,0	1/1:1,0:1:3:26,3,0	./.	1/1:0,0:1:3.01:145,3,0	./.	1/1:1,0:1:3.01:38,3,0	./.	./.	./.	./.	./.	./.	1/1:1,0:2:6.02:235,6,0	1/1:1,0:1:3.01:51,3,0	1/1:1,0:1:3.01:50,3,0	./.	./.	./.	./.	1/1:2,0:2:3:25,3,0	./.	./.
chr10	90873625	.	TTGGA	T	11160.10	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=7.675;DP=395;FS=18.333;HRun=0;HaplotypeScore=71.0437;InbreedingCoeff=0.9379;MQ=94.01;MQ0=0;MQRankSum=-7.460;QD=42.92;ReadPosRankSum=4.404;VQSLOD=3.7904;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,3345	0/0:5,0:5:12.04:0,12,320	0/0:15,0:15:42.14:0,42,999	0/0:26,0:26:69.17:0,69,1525	1/1:3,4:7:12.04:223,12,0	1/1:0,16:16:45.15:822,45,0	1/1:0,9:9:24.08:448,24,0	1/1:5,18:23:51.17:932,51,0	1/1:2,15:17:36.12:672,36,0	1/1:0,8:8:21.05:360,21,0	1/1:1,2:3:5.98:111,6,0	1/1:2,9:11:27.09:504,27,0	1/1:0,7:7:15.05:280,15,0	1/1:1,13:14:36.12:672,36,0	0/0:13,0:13:39.13:0,39,989	1/1:0,10:10:24.08:448,24,0	0/0:31,0:31:90.28:0,90,2342	1/1:0,21:21:45.11:786,45,0	1/1:2,8:10:24.05:413,24,0	1/1:0,6:6:12.04:224,12,0	1/1:2,24:26:54.14:972,54,0	1/1:0,5:5:12:188,12,0	1/1:1,7:8:21.07:392,21,0	1/1:0,22:22:51.17:952,51,0	1/1:0,6:6:18.06:336,18,0	1/1:2,17:19:51.16:922,51,0	1/1:2,6:8:15.05:280,15,0	1/1:0,4:4:12.04:224,12,0
chr10	90873822	.	GA	G	2298.24	PASS	AB=0.687;AC=39;AF=0.696;AN=56;BaseQRankSum=5.185;DP=409;FS=31.191;HRun=14;HaplotypeScore=65.1656;InbreedingCoeff=0.2865;MQ=86.70;MQ0=1;MQRankSum=-1.020;QD=7.76;ReadPosRankSum=4.267;VQSLOD=0.3927;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,2:32:4.43:0,4,327	0/0:3,0:3:9:0,9,80	0/0:33,0:22:17.32:0,17,132	0/0:31,0:21:8.66:0,9,83	1/1:2,3:7:12.99:73,13,0	1/1:4,15:21:39.67:253,40,0	0/1:3,6:10:8.57:70,0,9	0/1:11,9:21:19.69:108,0,20	1/1:6,4:11:10.91:67,11,0	1/1:4,5:11:0.63:93,1,0	0/1:1,6:8:11.37:71,0,11	1/1:2,2:6:15.95:93,16,0	1/1:4,4:9:10.92:67,11,0	1/1:4,9:15:24.81:155,25,0	0/0:13,0:13:6.45:0,6,187	0/1:3,4:7:15.88:50,0,16	0/1:26,2:28:7.43:7,0,346	1/1:5,11:18:36.70:238,37,0	1/1:10,11:21:12.76:220,13,0	1/1:1,2:4:7.97:47,8,0	1/1:2,8:12:21.91:135,22,0	0/1:3,3:6:19.21:32,0,19	1/1:3,9:12:26.70:185,27,0	1/1:0,11:13:27.88:176,28,0	1/1:4,1:6:4.92:26,5,0	1/1:10,9:20:24.49:153,24,0	0/1:12,2:17:10.04:59,0,10	1/1:5,6:13:5.26:94,5,0
chr10	90874023	.	C	CAG	15734.80	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-11.917;DP=435;FS=0.000;HRun=0;HaplotypeScore=48.9812;InbreedingCoeff=0.9927;MQ=84.18;MQ0=2;MQRankSum=-3.126;QD=48.27;ReadPosRankSum=0.773;VQSLOD=5.9146;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.28:0,87,1255	0/0:8,0:8:24.08:0,24,353	0/0:16,0:16:41.32:0,41,611	0/0:10,0:10:17.37:0,17,280	1/1:2,9:11:27.09:502,27,0	1/1:1,13:14:39.13:730,39,0	1/1:1,20:21:48.16:899,48,0	1/1:0,15:15:45.15:821,45,0	1/1:0,16:16:36.12:674,36,0	1/1:2,14:16:45.15:802,45,0	1/1:0,10:10:24.08:450,24,0	1/1:1,10:11:27.09:506,27,0	1/1:0,11:11:30.08:557,30,0	1/1:1,14:15:39.13:712,39,0	0/0:12,0:12:33.11:0,33,486	1/1:0,9:9:24.08:449,24,0	0/0:31,0:31:90.26:0,90,1279	1/1:0,25:23:69.24:1292,69,0	1/1:1,22:23:66.20:1181,66,0	1/1:0,7:7:18.06:333,18,0	1/1:2,32:34:75.26:1404,75,0	1/1:0,8:8:21.07:393,21,0	1/1:0,8:9:27.09:502,27,0	1/1:1,17:18:51.17:955,51,0	1/1:0,12:12:36.12:674,36,0	1/1:0,14:14:42.14:776,42,0	1/1:0,12:12:21.07:394,21,0	1/1:0,14:14:39.13:730,39,0
chr10	90874226	.	AG	A	799.69	PASS	AB=0.953;AC=24;AF=0.444;AN=54;BaseQRankSum=-4.535;DP=347;FS=1.429;HRun=10;HaplotypeScore=52.9132;InbreedingCoeff=0.2565;MQ=83.41;MQ0=2;MQRankSum=-0.686;QD=4.94;ReadPosRankSum=-3.018;VQSLOD=-0.0249;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:50.84:0,51,462	0/0:1,0:1:2.84:0,3,14	0/0:41,0:17:28.37:0,28,148	0/0:30,0:16:19.13:0,19,172	0/1:11,0:11:19.98:47,0,20	0/1:12,2:14:7.26:92,0,7	0/1:18,1:19:30.11:30,0,44	1/1:12,1:14:13.85:118,14,0	1/1:6,1:7:12.16:104,12,0	0/0:12,0:12:5.99:0,6,51	./.	1/1:9,0:9:14.90:113,15,0	0/0:5,0:5:0:0,0,0	1/1:10,0:10:7.78:75,8,0	1/1:3,0:3:2.97:21,3,0	0/0:5,0:5:9.25:0,9,62	0/0:23,0:23:21.32:0,21,288	0/0:18,0:18:20.90:0,21,158	0/1:11,0:11:13.39:54,0,13	0/1:8,0:8:20.52:57,0,21	1/1:10,0:10:4.58:38,5,0	0/0:7,0:7:6.01:0,6,63	1/1:8,0:8:3.83:42,4,0	0/1:15,0:15:2.08:28,0,2	0/0:10,0:10:5.82:0,6,35	0/1:10,0:10:21.26:41,0,21	1/1:7,2:9:10.01:93,10,0	0/1:2,1:4:15.42:18,0,15
chr10	90875489	.	ATT	A	4391.66	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=2.309;DP=563;FS=12.927;HRun=14;HaplotypeScore=73.7945;InbreedingCoeff=0.8694;MQ=71.90;MQ0=2;MQRankSum=1.082;QD=14.17;ReadPosRankSum=6.265;VQSLOD=2.1669;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:46:99:0,105,1355	0/0:7,0:7:12.03:0,12,152	0/1:16,0:12:7.80:8,0,110	0/0:12,0:10:6.93:0,7,73	1/1:6,11:18:32.96:305,33,0	1/1:5,7:14:17.50:197,18,0	1/1:9,20:30:38.44:438,38,0	1/1:5,11:17:23.83:222,24,0	1/1:5,15:20:41.93:388,42,0	0/0:8,0:19:42.06:0,42,441	0/0:10,0:17:26.41:0,26,337	1/1:5,14:19:16.84:335,17,0	0/0:3,0:16:9.02:0,9,92	1/1:7,13:20:7.26:249,7,0	0/0:28,0:32:85.72:0,86,1082	0/0:7,0:20:38.57:0,39,389	0/0:22,0:24:57.13:0,57,747	0/0:11,0:22:33.04:0,33,343	1/1:11,10:21:26.82:250,27,0	1/1:5,8:14:3.15:182,3,0	1/1:7,12:19:32.92:305,33,0	0/0:7,0:18:30.05:0,30,311	1/1:6,7:13:12.46:181,12,0	1/1:5,19:24:50.98:472,51,0	0/0:6,0:16:24.03:0,24,231	1/1:11,15:29:20.86:336,21,0	1/1:8,16:27:29.36:355,29,0	1/1:2,6:8:18.01:167,18,0
chr10	90876664	.	G	GGT	3575.76	PASS	AB=0.747;AC=17;AF=0.327;AN=52;BaseQRankSum=-8.044;DP=617;FS=5.727;HRun=0;HaplotypeScore=99.7144;InbreedingCoeff=-0.0643;MQ=63.27;MQ0=9;MQRankSum=3.238;QD=10.52;ReadPosRankSum=-0.729;VQSLOD=2.9159;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:32:53.31:0,53,504	0/0:6,0:7:11.85:0,12,105	./.	./.	0/1:9,5:14:54.99:74,0,55	0/1:8,10:19:12.44:252,0,12	0/1:17,12:29:8.18:289,0,8	0/1:23,2:26:74.55:95,0,75	0/1:19,12:33:51.77:396,0,52	0/0:14,0:23:20.87:0,21,104	0/0:6,0:10:5.64:0,6,27	1/1:3,10:13:19.31:276,19,0	0/0:6,0:19:17.04:0,17,84	0/1:10,10:20:33.96:342,0,34	0/0:14,0:17:26.74:0,27,262	0/0:9,0:21:25.57:0,26,126	0/0:27,0:31:62.98:0,63,626	0/0:6,0:13:11.36:0,11,56	0/1:14,1:17:32.65:69,0,33	0/1:11,3:16:63.11:119,0,63	0/1:23,17:44:2.52:252,0,3	0/0:11,0:21:19.83:0,20,98	0/1:16,3:19:1.80:186,0,2	0/1:24,14:40:99:444,0,191	0/0:6,0:14:17.04:0,17,84	1/1:11,10:21:2.52:414,3,0	0/1:13,9:23:99:286,0,100	0/1:2,2:5:5.12:82,0,5
chr10	90877357	.	CAAACAAAACA	C	11421.84	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=7.332;DP=528;FS=1.311;HRun=0;HaplotypeScore=180.1624;InbreedingCoeff=0.8034;MQ=64.07;MQ0=0;MQRankSum=-7.365;QD=27.72;ReadPosRankSum=-1.737;VQSLOD=4.0086;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:15.05:0,15,634	0/0:12,0:12:24.08:0,24,1051	0/0:10,0:5:3.01:0,3,44	0/0:24,0:14:6:0,6,67	1/1:7,9:16:18.06:486,18,0	1/1:12,9:21:21.07:622,21,0	1/1:13,1:14:21.05:374,21,0	1/1:16,0:16:12:131,12,0	1/1:13,18:31:3.14:516,3,0	1/1:9,15:24:42.13:1046,42,0	1/1:8,9:17:17.97:348,18,0	1/1:6,11:17:18.06:534,18,0	1/1:7,13:20:30.10:889,30,0	1/1:10,3:13:6.02:178,6,0	0/0:29,0:29:36.07:0,36,1303	1/1:5,15:20:24.08:711,24,0	0/0:28,0:28:48.15:0,48,1979	1/1:11,9:20:11.96:356,12,0	1/1:6,4:10:12.02:211,12,0	1/1:9,13:22:33.04:795,33,0	1/1:15,1:16:14.95:237,15,0	1/1:7,9:16:21.03:506,21,0	1/1:11,9:20:11.01:259,11,0	1/1:14,13:27:9.03:267,9,0	1/1:9,12:21:30.10:889,30,0	1/1:4,0:11:3.33:201,3,0	1/1:12,22:34:51.18:1511,51,0	1/1:2,4:6:12.04:356,12,0
chr10	90878173	.	C	CT	5000.03	PASS	AB=0.670;AC=35;AF=0.625;AN=56;BaseQRankSum=-1.095;DP=558;FS=2.813;HRun=12;HaplotypeScore=74.6830;InbreedingCoeff=0.1234;MQ=70.31;MQ0=6;MQRankSum=0.728;QD=10.99;ReadPosRankSum=0.594;VQSLOD=4.6124;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,1:25:23.26:0,23,302	0/0:7,0:7:14.88:0,15,108	0/0:28,0:16:1.13:0,1,150	0/1:14,0:9:0.15:0,0,44	0/1:7,9:17:16.76:153,0,17	0/1:6,5:11:0.88:151,0,1	0/1:13,18:30:13.54:271,0,14	1/1:17,22:40:46.83:527,47,0	0/1:4,11:15:6.89:102,0,7	1/1:3,12:16:32.85:293,33,0	0/1:5,9:15:19.27:146,0,19	0/1:5,11:15:3.84:128,0,4	1/1:2,6:8:12.02:117,12,0	1/1:4,13:17:18.79:215,19,0	0/1:16,1:17:2.41:2,0,146	0/1:5,19:25:9.09:245,0,9	0/0:40,0:43:93.36:0,93,661	1/1:11,19:30:14.01:284,14,0	1/1:6,5:14:7.55:166,8,0	1/1:8,10:18:8.37:192,8,0	0/1:7,8:18:8.73:135,0,9	1/1:1,7:8:12.02:117,12,0	0/1:3,10:13:0.88:154,0,1	1/1:10,27:38:60.86:695,61,0	0/1:6,7:13:8.64:77,0,9	1/1:8,19:28:55.93:443,56,0	1/1:3,18:24:12.43:335,12,0	0/1:2,4:6:12.90:49,0,13
chr10	90879393	.	G	GTA	3716.60	PASS	AB=0.760;AC=24;AF=0.429;AN=56;BaseQRankSum=-1.998;DP=584;FS=0.814;HRun=0;HaplotypeScore=98.3027;InbreedingCoeff=0.4066;MQ=58.54;MQ0=12;MQRankSum=2.922;QD=9.94;ReadPosRankSum=0.676;VQSLOD=3.2446;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:38.85:0,39,307	0/0:11,0:11:26.94:0,27,218	0/0:17,0:12:32.96:0,33,311	0/0:29,0:24:44.12:0,44,480	0/1:5,31:36:11.11:118,0,11	0/1:12,1:12:6.86:107,0,7	1/1:25,0:25:18.49:323,18,0	1/1:36,0:35:2.04:504,2,0	0/1:15,0:15:13.75:224,0,14	0/0:22,0:21:53.88:0,54,469	0/0:8,0:8:8.99:0,9,74	0/1:4,15:19:14.93:98,0,15	0/0:16,0:16:39.51:0,40,290	1/1:14,0:13:22.85:213,23,0	0/0:16,0:15:35.94:0,36,295	0/1:15,1:15:36.64:37,0,117	0/0:21,0:21:40.42:0,40,453	0/0:25,0:23:39.78:0,40,404	1/1:18,0:17:31.87:269,32,0	0/1:4,18:24:5.02:117,0,5	0/1:48,0:47:78.50:424,0,79	0/0:18,0:17:32.94:0,33,270	0/1:7,20:27:21.99:49,0,22	1/1:34,0:32:34.97:467,35,0	0/0:6,0:6:11.98:0,12,99	1/1:21,0:21:27.52:403,28,0	1/1:20,0:20:11.83:290,12,0	1/1:7,0:6:11.17:74,11,0
chr10	90879429	.	GTGTGTGTGTGTTGCA	G	720.49	PASS	AB=0.657;AC=7;AF=0.135;AN=52;BaseQRankSum=3.139;DP=562;FS=0.000;HRun=0;HaplotypeScore=180.2627;InbreedingCoeff=0.7169;MQ=56.89;MQ0=41;MQRankSum=-3.958;QD=11.81;ReadPosRankSum=-0.062;VQSLOD=2.4621;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:51.18:0,51,1789	0/0:5,0:5:15.05:0,15,651	0/0:36,0:14:29.40:0,29,1057	0/0:54,0:16:42.13:0,42,1031	0/0:26,0:26:33.08:0,33,1112	0/0:14,0:13:30.09:0,30,1239	0/0:26,0:26:60.80:0,61,2068	0/0:24,0:22:52.02:0,52,1272	0/0:15,0:15:42.13:0,42,1565	1/1:13,0:11:18.01:334,18,0	0/0:5,0:5:2.96:0,3,6	0/0:23,0:23:37.07:0,37,1407	1/1:4,3:6:3.01:136,3,0	0/0:13,0:12:33.11:0,33,1099	0/0:15,0:15:33.11:0,33,991	0/1:11,12:18:99:168,0,203	0/0:27,0:27:75.21:0,75,2581	1/1:18,0:16:11.84:214,12,0	0/0:13,0:12:30.99:0,31,939	0/0:20,0:20:48.12:0,48,1613	0/0:44,0:44:96.33:0,96,3752	./.	0/0:26,0:25:27.56:0,28,967	0/0:33,0:32:78.27:0,78,2808	./.	0/0:18,0:18:52.06:0,52,1811	0/0:14,0:14:33.55:0,34,1339	0/0:7,0:7:18.06:0,18,557
chr10	90879439	.	GTTGCA	G	490.40	PASS	AB=1.000;AC=7;AF=0.135;AN=52;BaseQRankSum=3.888;DP=522;FS=7.180;HRun=0;HaplotypeScore=93.2774;InbreedingCoeff=0.6878;MQ=71.32;MQ0=41;MQRankSum=-4.574;QD=8.31;ReadPosRankSum=0.791;VQSLOD=1.2733;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:45.15:0,45,1231	0/0:3,0:3:9.03:0,9,263	0/0:42,0:20:55.43:0,55,1557	0/0:63,0:25:69.22:0,69,1770	0/0:14,0:14:33.08:0,33,804	0/0:15,0:14:27.09:0,27,721	0/0:26,0:25:58.44:0,58,1588	0/0:25,0:24:60.21:0,60,1675	0/0:13,0:13:39.13:0,39,1100	1/1:6,8:11:18.06:354,18,0	0/0:3,3:5:2.49:0,2,6	0/0:16,0:16:39.13:0,39,1103	1/1:6,0:5:3.01:48,3,0	0/0:12,0:12:30.10:0,30,834	0/0:13,0:13:36.12:0,36,1032	0/1:22,0:17:40.87:41,0,83	0/0:19,0:19:51.16:0,51,1366	1/1:5,12:15:9.03:177,9,0	0/0:11,0:10:18.06:0,18,523	0/0:20,0:20:57.15:0,57,1446	0/0:41,0:41:96.32:0,96,2584	./.	0/0:15,0:14:33.11:0,33,927	0/0:33,0:32:69.24:0,69,1894	./.	0/0:18,0:18:33.11:0,33,943	0/0:11,0:11:24.08:0,24,689	0/0:7,0:7:12.04:0,12,340
chr10	90880100	.	CTCTCTTTCTT	C	9203.42	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=7.719;DP=601;FS=23.407;HRun=0;HaplotypeScore=159.6400;InbreedingCoeff=0.5300;MQ=54.25;MQ0=37;MQRankSum=-4.495;QD=23.66;ReadPosRankSum=-1.822;VQSLOD=2.6822;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:80.48:0,80,2034	0/0:12,0:12:31.90:0,32,885	0/0:22,0:11:20.40:0,20,300	0/0:40,0:12:15.05:0,15,248	1/1:32,0:31:29.67:586,30,0	1/1:5,19:21:15.05:471,15,0	1/1:15,0:12:24.08:479,24,0	1/1:4,27:31:72.57:1168,73,0	1/1:6,14:16:8.92:290,9,0	0/1:23,0:22:12.78:13,0,191	0/1:16,0:16:87.29:98,0,87	1/1:19,0:15:23.91:324,24,0	0/1:17,0:17:99:109,0,179	1/1:16,0:16:27.01:491,27,0	0/0:17,0:16:45.14:0,45,1342	0/1:11,0:11:40.42:176,0,40	0/0:49,0:49:99:0,101,2600	0/0:20,0:19:36.15:0,36,214	1/1:17,0:15:42.11:769,42,0	1/1:27,0:21:41:874,41,0	1/1:15,0:11:24.08:535,24,0	0/0:13,0:13:27.62:0,28,193	1/1:4,15:15:11.20:319,11,0	1/1:19,0:16:12.04:240,12,0	0/1:14,0:14:99:143,0,100	0/1:19,0:18:46.68:657,0,47	1/1:15,0:11:15.05:315,15,0	1/1:20,0:19:51.17:1147,51,0
chr10	90880104	.	CTT	C	4821.48	PASS	AB=0.542;AC=27;AF=0.482;AN=56;BaseQRankSum=10.958;DP=590;FS=39.137;HRun=3;HaplotypeScore=109.6747;InbreedingCoeff=0.6959;MQ=53.86;MQ0=37;MQRankSum=-1.807;QD=15.97;ReadPosRankSum=-0.229;VQSLOD=0.1985;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:61.42:0,61,1567	0/0:13,0:13:33.01:0,33,523	0/0:21,0:10:15.78:0,16,260	0/0:37,0:11:14.85:0,15,201	0/1:3,0:30:20.09:397,0,20	1/1:22,0:19:14.80:119,15,0	1/1:5,12:14:1.17:291,1,0	1/1:30,0:29:67.46:695,67,0	1/1:18,1:15:11.76:72,12,0	0/0:23,0:21:50.97:0,51,705	0/0:15,0:15:15.80:0,16,353	1/1:2,17:15:24.06:313,24,0	0/0:18,0:18:39.27:0,39,571	1/1:1,14:15:27.04:346,27,0	0/0:18,0:17:45.14:0,45,828	0/0:9,0:9:5.65:0,6,234	0/0:50,0:50:99:0,102,1894	0/0:20,0:20:45.94:0,46,513	1/1:2,0:14:40.28:485,40,0	1/1:6,0:21:12.66:367,13,0	1/1:3,12:11:5.09:309,5,0	0/0:14,0:14:31.49:0,31,393	1/1:19,0:15:11.77:126,12,0	1/1:5,4:17:11.97:137,12,0	0/0:13,0:13:19.50:0,20,354	0/1:2,0:15:39.16:251,0,39	0/1:4,13:13:38.65:175,0,39	1/1:1,18:18:51.17:737,51,0
chr10	90880110	.	TTCTC	T	4613.40	PASS	AB=0.989;AC=34;AF=0.607;AN=56;BaseQRankSum=4.802;DP=571;FS=23.744;HRun=0;HaplotypeScore=125.0809;InbreedingCoeff=0.2245;MQ=51.46;MQ0=39;MQRankSum=-2.136;QD=11.22;ReadPosRankSum=3.133;VQSLOD=2.4463;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:71.72:0,72,673	0/0:11,0:11:23.95:0,24,314	0/0:16,0:8:13.81:0,14,96	0/0:29,0:7:11.41:0,11,75	0/1:30,0:29:30.51:113,0,31	1/1:21,0:18:14.92:113,15,0	0/1:15,0:12:29.08:104,0,29	1/1:33,0:31:8.19:229,8,0	0/1:20,0:16:27.95:55,0,28	1/1:20,1:19:53.87:500,54,0	0/1:14,2:16:19.49:304,0,19	1/1:14,3:13:25.82:294,26,0	1/1:14,2:16:23.80:367,24,0	1/1:10,4:14:27.51:299,28,0	0/0:19,0:18:39.04:0,39,526	1/1:10,2:12:27.02:270,27,0	0/0:51,0:51:96.69:0,97,970	1/1:19,0:18:20.83:277,21,0	1/1:17,0:15:13.66:191,14,0	0/1:27,0:21:5.94:174,0,6	0/1:14,0:10:14.09:155,0,14	0/1:10,0:10:27.59:131,0,28	1/1:19,0:15:11.73:85,12,0	1/1:19,0:16:8.18:53,8,0	1/1:11,3:14:8.72:299,9,0	0/1:16,0:15:99:195,0,105	0/1:18,0:14:65.42:65,0,123	0/1:23,0:22:22.34:339,0,22
chr10	90880114	.	C	CTCTT	1126.78	PASS	AB=1.000;AC=22;AF=0.458;AN=48;BaseQRankSum=-3.843;DP=554;FS=0.932;HRun=0;HaplotypeScore=140.5070;InbreedingCoeff=0.4295;MQ=50.78;MQ0=40;MQRankSum=2.622;QD=3.83;ReadPosRankSum=-1.561;VQSLOD=2.2906;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,7:29:12.01:213,12,0	1/1:5,7:12:13.72:233,14,0	./.	./.	1/1:30,0:29:2.94:18,3,0	0/0:22,0:19:14.68:0,15,120	0/0:14,0:11:2.99:0,3,24	./.	0/0:20,0:16:12.01:0,12,115	0/0:22,0:20:8.97:0,9,73	0/0:17,0:17:12.45:0,12,99	0/1:16,0:12:8.11:45,0,8	0/1:15,0:15:3.50:7,0,3	1/1:15,0:15:10.72:119,11,0	1/1:8,10:17:15.05:347,15,0	0/0:12,0:12:5.74:0,6,57	1/1:32,20:52:12:229,12,0	1/1:19,0:18:2.14:6,2,0	0/0:18,0:15:3:0,3,28	0/1:27,0:21:36.78:37,0,57	./.	0/1:10,0:10:0.36:0,0,1	0/0:19,0:15:4.79:0,5,32	1/1:18,0:15:2.97:20,3,0	0/1:14,0:14:1.34:1,0,3	0/0:16,0:15:20.13:0,20,175	0/1:17,0:13:1.36:1,0,13	0/0:22,0:21:0:0,0,0
chr10	90880156	.	CTTTCTTTCTTTT	C	2497.82	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=3.750;DP=427;FS=5.064;HRun=0;HaplotypeScore=154.3221;InbreedingCoeff=0.6669;MQ=62.67;MQ0=4;MQRankSum=-2.816;QD=16.99;ReadPosRankSum=-0.017;VQSLOD=2.4097;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:42.53:0,43,974	0/0:14,0:14:37.28:0,37,884	0/0:9,0:6:15.02:0,15,143	0/0:12,0:7:20.99:0,21,209	0/0:18,0:18:35.95:0,36,410	0/0:17,0:17:2.87:0,3,245	0/0:13,0:13:36.09:0,36,528	0/0:23,0:22:60.84:0,61,581	0/0:20,0:19:22.89:0,23,423	1/1:11,1:11:15.39:266,15,0	1/1:14,2:16:32.08:408,32,0	0/0:15,0:14:30.96:0,31,420	1/1:7,2:10:26.32:404,26,0	0/0:14,0:14:35.55:0,36,479	0/0:16,0:15:30.09:0,30,1096	1/1:15,0:15:31.22:512,31,0	0/0:31,0:31:42.07:0,42,1132	1/1:9,0:9:18.21:142,18,0	0/1:16,0:15:8.91:9,0,225	0/1:22,0:22:99:150,0,330	0/0:3,0:3:9.02:0,9,127	1/1:9,0:9:22.65:175,23,0	0/0:23,0:23:27.72:0,28,374	0/0:14,0:13:17.92:0,18,147	1/1:12,3:15:29.91:458,30,0	0/1:18,0:18:99:168,0,414	0/0:17,0:17:44.89:0,45,502	0/1:5,0:5:1.91:2,0,71
chr10	90880549	.	G	GGTGGGTGTGTGT	6964.86	PASS	AB=0.978;AC=28;AF=0.500;AN=56;BaseQRankSum=-11.003;DP=734;FS=3.735;HRun=0;HaplotypeScore=286.2017;InbreedingCoeff=-0.1561;MQ=56.74;MQ0=10;MQRankSum=-2.648;QD=12.48;ReadPosRankSum=-7.382;VQSLOD=1.1255;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:20.69:0,21,1321	0/0:13,0:14:39.03:0,39,951	0/0:38,0:22:46.37:0,46,538	0/0:40,0:25:46.27:0,46,618	0/1:28,0:28:99:243,0,491	0/1:30,0:30:99:118,0,1114	0/1:25,0:25:99:193,0,606	0/1:33,0:33:99:507,0,153	0/1:25,0:24:99:196,0,519	1/1:15,0:15:30.94:494,31,0	1/1:5,7:22:2.08:136,2,0	0/1:27,0:27:99:205,0,635	1/1:8,0:21:15.39:535,15,0	0/1:14,0:14:57.50:57,0,467	0/0:22,0:24:57.08:0,57,1292	1/1:6,7:19:9.64:910,10,0	0/0:24,0:28:73.01:0,73,2034	0/1:7,8:16:0.43:825,0,0	0/1:22,0:21:99:207,0,370	0/1:26,0:26:99:119,0,550	0/1:62,0:63:99:634,0,1189	1/1:5,4:13:8.98:248,9,0	0/1:20,0:20:98.82:99,0,305	0/1:39,0:39:99:260,0,1138	1/1:8,13:23:15.01:444,15,0	0/1:33,0:33:99:210,0,774	0/1:19,0:19:99:168,0,477	0/1:24,0:23:99:158,0,542
chr10	90880552	.	GT	G	2551.28	PASS	AB=0.733;AC=18;AF=0.321;AN=56;BaseQRankSum=12.788;DP=719;FS=5.345;HRun=1;HaplotypeScore=154.2567;InbreedingCoeff=-0.3417;MQ=56.29;MQ0=10;MQRankSum=-0.190;QD=5.59;ReadPosRankSum=8.529;VQSLOD=0.2988;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:30:73.92:0,74,998	0/0:14,0:14:42.10:0,42,585	0/0:40,0:23:66.18:0,66,838	0/0:45,0:27:75.05:0,75,939	0/1:16,11:27:54.16:144,0,54	0/1:11,17:28:85:226,0,85	0/1:13,12:25:54.48:200,0,54	0/1:27,6:32:65.45:65,0,142	0/1:14,10:23:54.44:121,0,54	0/1:12,0:12:18.94:19,0,206	0/0:16,0:15:8.18:0,8,66	0/1:13,13:26:99:146,0,102	0/0:21,0:21:12.30:0,12,119	1/1:4,10:14:10.76:171,11,0	0/0:24,0:24:69.85:0,70,972	0/0:17,0:17:11.82:0,12,107	0/0:28,0:28:69.64:0,70,993	0/0:14,0:14:5.63:0,6,179	0/1:14,7:20:41.99:168,0,42	0/1:13,12:25:50.52:135,0,51	0/1:38,25:63:99:304,0,244	0/0:10,0:10:8.99:0,9,114	0/1:11,7:18:79.10:101,0,79	0/1:22,23:45:99:310,0,108	0/1:21,0:21:13.94:14,0,40	0/1:15,16:31:46.87:301,0,47	0/1:10,9:19:34.23:122,0,34	0/1:10,14:24:25.87:168,0,26
chr10	90880554	.	GT	G	2016.67	PASS	AB=0.683;AC=15;AF=0.268;AN=56;BaseQRankSum=14.092;DP=707;FS=6.322;HRun=1;HaplotypeScore=153.4221;InbreedingCoeff=-0.3711;MQ=55.05;MQ0=11;MQRankSum=2.028;QD=4.85;ReadPosRankSum=10.634;VQSLOD=-0.5073;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:30:77.05:0,77,1079	0/0:13,0:13:39.12:0,39,564	0/0:38,0:18:54.16:0,54,698	0/0:43,0:24:66.18:0,66,848	0/1:17,9:28:78.23:98,0,78	0/1:11,17:28:99:209,0,135	0/1:14,12:26:63.58:220,0,64	0/1:29,5:34:72:72,0,189	0/1:13,10:22:75.31:83,0,75	0/0:10,0:10:29.37:0,29,291	0/0:17,0:16:11.17:0,11,90	0/1:14,10:27:99:110,0,154	0/0:20,0:20:12.51:0,13,162	0/1:6,10:16:9.65:139,0,10	0/0:24,0:24:69.85:0,70,973	0/0:17,0:17:12.04:0,12,151	0/0:28,0:28:69.64:0,70,1000	0/0:15,0:15:11:0,11,277	0/1:10,6:16:76.73:77,0,104	0/1:12,10:23:63.08:118,0,63	0/1:38,23:63:99:227,0,326	0/0:10,0:10:9.01:0,9,117	0/1:11,5:18:69.64:70,0,98	0/1:23,22:46:99:305,0,133	0/0:22,0:22:6:0,6,83	0/1:11,15:27:78.50:188,0,78	0/1:10,8:19:65.39:104,0,65	0/1:6,13:20:36.09:153,0,36
chr10	90880676	.	C	CT	5065.91	PASS	AB=0.769;AC=29;AF=0.518;AN=56;BaseQRankSum=-9.560;DP=589;FS=3.354;HRun=11;HaplotypeScore=61.2646;InbreedingCoeff=0.7166;MQ=65.10;MQ0=1;MQRankSum=0.089;QD=14.77;ReadPosRankSum=-0.602;VQSLOD=5.1590;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,4:30:31.31:0,31,416	0/0:3,0:3:5.97:0,6,46	0/1:18,0:14:6.89:7,0,88	0/0:19,0:11:11.62:0,12,79	1/1:4,14:19:19.96:341,20,0	1/1:5,15:22:35.07:374,35,0	1/1:3,12:16:5.99:275,6,0	1/1:8,22:30:60.82:587,61,0	1/1:4,19:23:21.83:392,22,0	0/0:26,0:27:64.76:0,65,491	0/0:9,0:9:11.88:0,12,91	1/1:7,19:26:18.84:365,19,0	0/0:18,0:18:35.76:0,36,271	1/1:4,9:14:23.88:227,24,0	0/0:27,0:28:55.73:0,56,419	0/0:17,0:18:9.34:0,9,210	0/0:38,0:39:63.15:0,63,630	0/0:18,0:20:31.81:0,32,234	0/1:14,15:30:17.28:387,0,17	1/1:6,15:22:22.25:312,22,0	1/1:7,24:33:35.28:416,35,0	0/0:14,0:15:22.59:0,23,168	1/1:7,9:16:15.03:152,15,0	1/1:2,20:22:33.88:525,34,0	0/0:18,0:18:32.23:0,32,235	1/1:9,12:21:33.05:329,33,0	0/1:7,9:15:19.42:186,0,19	1/1:5,10:15:0.81:190,1,0
chr10	90881361	.	T	TGGGCTGCAAGGCA	42956.74	PASS	AB=0.595;AC=29;AF=0.518;AN=56;BaseQRankSum=-3.389;DP=588;FS=13.311;HRun=0;HaplotypeScore=190.9680;InbreedingCoeff=0.9261;MQ=80.47;MQ0=0;MQRankSum=-17.750;QD=140.84;ReadPosRankSum=-1.224;VQSLOD=3.8470;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,103,3842	0/0:10,0:10:30.10:0,30,1211	0/0:18,0:18:51.16:0,51,1605	0/0:25,0:25:69.47:0,69,2227	1/1:9,8:20:36.08:1536,36,0	1/1:9,12:24:57.20:3292,57,0	1/1:12,6:20:54.19:3247,54,0	1/1:22,2:30:84.27:3886,84,0	1/1:12,14:28:78.27:4808,78,0	0/0:26,0:26:72.25:0,72,2772	0/0:17,0:17:33.11:0,33,1289	1/1:8,12:22:57.20:3431,57,0	0/0:26,0:26:78.27:0,78,3070	1/1:5,11:20:51.18:3244,51,0	0/0:16,0:16:48.15:0,48,1767	0/0:12,0:12:36.12:0,36,1331	0/0:41,0:41:99:0,120,4504	0/0:15,0:15:39.13:0,39,1496	1/1:9,10:22:60.16:3078,60,0	1/1:9,3:13:36.12:2017,36,0	1/1:13,6:27:48.16:2574,48,0	0/0:18,0:18:54.19:0,54,2116	1/1:6,6:13:33.11:1930,33,0	1/1:6,9:16:33.11:2000,33,0	0/0:20,0:20:57.18:0,57,2131	0/1:8,16:25:99:4281,0,167	1/1:6,9:17:45.15:2645,45,0	1/1:4,2:7:15.05:990,15,0
chr10	90881504	.	T	TC	12892.08	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-8.992;DP=613;FS=1.790;HRun=3;HaplotypeScore=60.7661;InbreedingCoeff=0.9975;MQ=75.59;MQ0=0;MQRankSum=-4.898;QD=35.42;ReadPosRankSum=-0.210;VQSLOD=5.2208;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,123,1473	0/0:6,0:6:18.06:0,18,216	0/0:17,0:17:39.06:0,39,432	0/0:10,0:10:20.53:0,21,200	1/1:1,12:13:36.12:504,36,0	1/1:0,21:21:57.19:790,57,0	1/1:1,20:21:51.17:711,51,0	1/1:2,29:31:84.25:1128,84,0	1/1:3,25:28:75.25:1037,75,0	0/0:21,0:21:57.17:0,57,683	0/0:11,0:11:24.06:0,24,277	1/1:1,22:23:60.16:817,60,0	0/0:22,0:22:63.19:0,63,756	1/1:1,27:28:78.22:1069,78,0	0/0:24,0:24:72.22:0,72,864	0/0:12,0:12:36.08:0,36,418	0/0:22,0:22:66.18:0,66,779	0/0:23,0:23:60.18:0,60,720	1/1:1,26:27:78.24:1065,78,0	1/1:0,20:20:45.15:628,45,0	1/1:3,59:62:99:2083,150,0	0/0:19,0:19:42.13:0,42,503	1/1:1,13:14:36.12:503,36,0	1/1:1,24:25:27.21:804,27,0	0/0:15,0:15:45.14:0,45,540	1/1:5,21:26:33.21:871,33,0	1/1:0,14:14:39.13:546,39,0	1/1:2,9:11:24.08:336,24,0
chr10	90881667	.	G	GTTC	27543.13	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-11.958;DP=725;FS=5.588;HRun=0;HaplotypeScore=94.9505;InbreedingCoeff=0.9996;MQ=67.68;MQ0=6;MQRankSum=-5.181;QD=48.58;ReadPosRankSum=1.186;VQSLOD=6.7391;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,1876	0/0:10,0:10:30.10:0,30,489	0/0:18,0:18:44.25:0,44,640	0/0:20,0:18:48.16:0,48,771	1/1:3,24:28:59.79:1046,60,0	1/1:0,17:18:45.15:1003,45,0	1/1:6,24:30:60.20:1308,60,0	1/1:6,28:32:90.30:1858,90,0	1/1:3,27:31:69.23:1502,69,0	1/1:6,36:43:99:2145,105,0	1/1:2,15:17:38.79:665,39,0	1/1:1,35:36:91.55:2010,92,0	1/1:2,17:19:42.01:839,42,0	1/1:4,23:28:59.94:1143,60,0	0/0:33,0:33:99:0,99,1564	1/1:3,22:25:66.23:1468,66,0	0/0:33,0:33:87.25:0,87,1368	1/1:2,17:19:36.12:794,36,0	1/1:3,17:20:57.19:1183,57,0	1/1:2,16:18:47.74:747,48,0	1/1:2,23:26:55.16:1106,55,0	1/1:1,19:21:51:1007,51,0	1/1:2,26:28:71.82:1357,72,0	1/1:3,15:18:39.13:834,39,0	1/1:1,31:33:78.13:1644,78,0	1/1:2,31:33:93.30:1912,93,0	1/1:1,25:27:66.09:1370,66,0	1/1:1,11:12:27.09:603,27,0
chr10	90881670	.	C	CT	3718.69	PASS	AB=0.989;AC=31;AF=0.554;AN=56;BaseQRankSum=14.573;DP=714;FS=8.683;HRun=2;HaplotypeScore=151.3032;InbreedingCoeff=0.0729;MQ=65.70;MQ0=6;MQRankSum=-1.820;QD=6.70;ReadPosRankSum=9.540;VQSLOD=-0.2907;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:45:99:0,123,1567	0/0:10,0:10:30.10:0,30,389	0/0:17,0:16:32.53:0,33,483	0/0:20,0:18:48.14:0,48,603	0/1:28,0:28:83.49:83,0,262	1/1:19,0:19:15.49:111,15,0	0/1:28,0:26:17.32:118,0,17	0/1:30,1:29:41.98:418,0,42	1/1:29,1:30:55.76:241,56,0	1/1:37,1:38:14.71:408,15,0	0/1:15,0:16:57.24:57,0,112	1/1:38,0:38:4.03:197,4,0	0/1:19,0:18:36.27:74,0,36	0/1:27,0:27:54.35:128,0,54	0/0:35,0:35:99:0,105,1347	1/1:23,0:23:20.27:178,20,0	0/0:31,0:31:90.28:0,90,1151	0/1:19,0:19:40.88:97,0,41	1/1:21,2:23:31.19:354,31,0	0/1:18,0:18:35.73:36,0,223	1/1:27,0:27:10.82:142,11,0	0/1:22,0:22:67.34:67,0,150	0/1:28,0:28:99:112,0,121	0/1:16,1:17:2.08:118,0,2	0/1:33,0:33:5.39:153,0,5	1/1:32,2:34:39.18:421,39,0	0/1:26,0:26:50.03:119,0,50	1/1:11,0:11:22.82:87,23,0
chr10	90882432	.	AAATGAATGAATG	A	6663.99	PASS	AB=0.984;AC=16;AF=0.286;AN=56;BaseQRankSum=-2.061;DP=672;FS=6.343;HRun=0;HaplotypeScore=278.1691;InbreedingCoeff=0.8354;MQ=69.54;MQ0=2;MQRankSum=-5.381;QD=31.14;ReadPosRankSum=1.168;VQSLOD=3.2750;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:66.20:0,66,3245	0/0:9,0:10:24.08:0,24,1285	0/1:18,0:14:3.17:3,0,156	0/0:34,0:33:35.41:0,35,1403	0/0:30,0:30:52.89:0,53,1000	0/0:23,0:23:35.64:0,36,378	0/0:24,0:24:23.72:0,24,274	0/0:37,0:37:78.24:0,78,1547	0/0:24,0:24:40.28:0,40,317	1/1:5,21:26:57.15:1682,57,0	1/1:9,15:24:20.88:443,21,0	0/0:26,0:26:40.93:0,41,458	1/1:12,15:27:36.12:1260,36,0	0/0:24,0:24:40.92:0,41,337	0/0:37,0:37:87.24:0,87,4109	1/1:9,17:26:42.01:1470,42,0	0/0:25,0:25:36.11:0,36,1891	1/1:8,12:20:18.06:615,18,0	0/0:16,0:16:26.97:0,27,357	0/0:20,0:20:44.91:0,45,720	0/0:22,0:22:12.30:0,12,135	1/1:10,11:21:14.97:355,15,0	0/0:18,0:18:41.82:0,42,577	0/0:25,0:25:30.15:0,30,207	1/1:7,14:21:24.04:726,24,0	0/1:30,1:31:99:110,0,732	0/0:23,0:23:44.46:0,44,441	0/0:7,0:7:11.82:0,12,76
chr10	90882463	.	TGAATAAAC	T	14698.92	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=14.767;DP=644;FS=0.704;HRun=0;HaplotypeScore=189.3211;InbreedingCoeff=0.4368;MQ=64.54;MQ0=0;MQRankSum=-7.785;QD=28.49;ReadPosRankSum=5.185;VQSLOD=4.0350;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.28:0,84,2727	0/0:15,0:15:42.14:0,42,1409	0/0:15,0:14:39.11:0,39,838	0/0:20,0:20:57.56:0,58,1159	1/1:1,26:27:65.73:796,66,0	1/1:0,19:19:30.10:717,30,0	1/1:0,19:19:18.06:485,18,0	1/1:0,37:37:99:1824,111,0	1/1:0,20:21:39.13:1164,39,0	0/1:26,0:26:99:156,0,360	0/1:24,0:24:15.80:16,0,567	1/1:0,21:21:30.10:849,30,0	0/1:23,0:23:99:192,0,312	1/1:0,24:24:36.12:1056,36,0	0/0:30,0:30:90.28:0,90,3027	0/1:21,0:21:99:221,0,151	0/0:20,0:20:60.21:0,60,1922	0/1:21,0:21:57.21:57,0,359	1/1:1,23:24:66.16:1209,66,0	1/1:0,20:20:57.19:936,57,0	1/1:0,20:20:6.02:97,6,0	0/1:21,0:21:9.11:9,0,534	1/1:0,29:29:37.32:769,37,0	1/1:0,22:22:30.05:702,30,0	0/1:22,0:22:72.13:72,0,419	1/1:3,32:35:43.20:1972,43,0	1/1:0,22:22:41.73:1036,42,0	1/1:0,18:18:12.04:362,12,0
chr10	90882899	.	C	CCTCT	2713.27	PASS	AB=0.855;AC=41;AF=0.788;AN=52;BaseQRankSum=1.952;DP=626;FS=19.533;HRun=0;HaplotypeScore=144.1585;InbreedingCoeff=0.3550;MQ=53.02;MQ0=9;MQRankSum=-2.446;QD=5.38;ReadPosRankSum=-3.434;VQSLOD=0.6557;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:29:18.80:0,19,192	0/0:11,0:11:2.82:0,3,45	0/1:19,0:10:0:0,0,0	./.	0/0:19,0:18:0:0,0,0	1/1:29,0:28:2.91:59,3,0	1/1:27,0:26:6.02:88,6,0	1/1:26,0:26:5.20:62,5,0	1/1:15,0:14:5.87:97,6,0	1/1:27,0:26:22.43:413,22,0	./.	1/1:26,0:26:5.94:112,6,0	1/1:19,0:19:11.94:232,12,0	1/1:16,0:16:8.73:141,9,0	0/0:23,0:24:14.79:0,15,213	0/1:15,3:18:37.77:117,0,38	0/1:16,0:29:10.07:10,0,106	1/1:15,9:24:5.69:82,6,0	1/1:24,0:23:12.93:205,13,0	1/1:18,0:18:6.48:122,6,0	1/1:41,0:40:3.01:48,3,0	1/1:14,4:20:6.02:141,6,0	1/1:19,0:19:9:90,9,0	1/1:32,0:32:8.72:159,9,0	1/1:18,0:18:5.75:79,6,0	1/1:22,0:22:30.53:464,31,0	1/1:19,0:17:6:80,6,0	1/1:15,0:14:3.01:51,3,0
chr10	90883538	.	CTGTGTGTGTGTGTG	C	3037.46	PASS	AB=0.803;AC=23;AF=0.460;AN=50;BaseQRankSum=6.057;DP=569;FS=64.300;HRun=0;HaplotypeScore=251.5300;InbreedingCoeff=0.1026;MQ=39.85;MQ0=13;MQRankSum=-6.743;QD=10.06;ReadPosRankSum=-4.036;VQSLOD=-0.0945;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:62:92.77:0,93,4205	0/0:15,0:15:27.09:0,27,1425	./.	0/0:6,0:3:0:0,0,0	1/1:22,1:25:4.15:74,4,0	0/1:13,2:17:33.47:106,0,33	./.	0/0:27,0:23:0:0,0,0	0/0:12,6:20:8.61:0,9,83	0/1:10,0:14:23.16:524,0,23	1/1:15,0:17:1.36:3,1,0	0/1:19,2:18:33.80:106,0,34	0/1:6,0:7:10.38:75,0,10	1/1:16,6:24:5.24:142,5,0	0/0:28,0:29:51.14:0,51,2577	0/0:9,0:10:3.01:0,3,33	0/0:19,0:31:26.95:0,27,749	1/1:5,1:6:2.33:65,2,0	0/1:17,4:20:99:312,0,110	1/1:24,2:30:1.59:196,2,0	0/0:8,0:6:0.89:0,1,2	1/1:12,0:24:3.01:58,3,0	./.	1/1:13,6:20:3.48:117,3,0	1/1:9,0:14:3.01:64,3,0	0/1:24,4:27:99:1136,0,199	0/1:13,9:25:63.50:202,0,64	0/0:10,0:10:6.02:0,6,90
chr10	90885122	.	G	GAGGGCGCC	34827.60	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-6.959;DP=528;FS=4.677;HRun=0;HaplotypeScore=135.7227;InbreedingCoeff=0.9889;MQ=74.99;MQ0=0;MQRankSum=-14.956;QD=89.99;ReadPosRankSum=-0.974;VQSLOD=5.2124;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,3403	0/0:6,0:6:18.06:0,18,517	0/0:27,0:26:69.19:0,69,1657	0/0:20,0:19:43.36:0,43,1028	1/1:6,10:18:14.40:535,14,0	1/1:8,14:23:57.20:2308,57,0	1/1:5,13:20:54.19:2350,54,0	1/1:10,17:32:90.29:3403,90,0	1/1:6,5:11:27.05:1009,27,0	1/1:5,13:19:54.17:2134,54,0	1/1:5,8:14:17.68:756,18,0	1/1:1,9:11:30.10:1296,30,0	1/1:3,6:9:27.09:1116,27,0	1/1:6,15:21:57.20:2408,57,0	0/0:12,0:12:36.12:0,36,1033	1/1:5,13:22:51.18:2170,51,0	0/0:35,0:35:99:0,102,2907	1/1:0,8:9:24.08:1068,24,0	1/1:10,5:16:45.14:1501,45,0	1/1:10,14:26:48.16:1828,48,0	1/1:7,7:15:20.61:626,21,0	1/1:6,10:19:38.73:1382,39,0	1/1:5,7:13:29.94:1097,30,0	1/1:0,11:14:24.04:895,24,0	1/1:2,12:17:39.09:1402,39,0	1/1:11,15:31:81.28:2934,81,0	1/1:4,13:19:45.15:1906,45,0	1/1:3,3:6:18.06:703,18,0
chr10	90888524	.	G	GTT	5666.76	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=7.455;DP=300;FS=3.431;HRun=8;HaplotypeScore=47.5441;InbreedingCoeff=0.6409;MQ=59.84;MQ0=1;MQRankSum=-3.019;QD=25.19;ReadPosRankSum=-0.082;VQSLOD=3.6952;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.19:0,69,769	0/0:5,0:5:12.03:0,12,134	0/1:8,0:4:6.48:6,0,58	0/1:11,0:9:6.07:6,0,150	1/1:7,10:19:29.98:363,30,0	1/1:3,14:18:33.08:493,33,0	1/1:0,2:2:6.02:94,6,0	1/1:7,10:13:18.06:277,18,0	1/1:1,6:7:15.05:236,15,0	1/1:2,5:7:15.05:236,15,0	1/1:5,4:10:12.51:170,13,0	1/1:5,1:6:11.98:121,12,0	1/1:2,2:4:3.01:47,3,0	1/1:0,3:3:6.02:94,6,0	0/0:5,0:5:15.04:0,15,167	1/1:3,7:10:21.07:330,21,0	0/0:39,0:39:93.18:0,93,1015	1/1:3,11:12:27.09:423,27,0	1/1:4,6:11:20.89:250,21,0	1/1:0,6:6:18.06:274,18,0	1/1:3,1:4:3.01:47,3,0	1/1:0,2:2:6.02:94,6,0	1/1:0,4:4:9.03:142,9,0	1/1:1,2:8:12.03:152,12,0	1/1:1,10:11:30.10:464,30,0	1/1:2,10:12:30.09:451,30,0	1/1:5,5:10:21.07:330,21,0	1/1:2,18:20:34.64:564,35,0
chr10	90888859	.	C	CTGTG	19683.11	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-7.938;DP=721;FS=18.335;HRun=0;HaplotypeScore=124.1000;InbreedingCoeff=0.9064;MQ=62.73;MQ0=7;MQRankSum=-2.518;QD=38.07;ReadPosRankSum=2.099;VQSLOD=4.1486;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:66.63:0,67,1710	0/0:5,0:5:12:0,12,173	0/0:51,0:29:39.47:0,39,490	0/0:49,0:28:25.46:0,25,560	1/1:4,20:25:36.12:878,36,0	1/1:4,21:26:45.15:1122,45,0	1/1:3,24:29:48.16:1198,48,0	1/1:15,20:37:80.96:1646,81,0	1/1:1,27:30:75.12:1811,75,0	1/1:17,0:16:8.61:468,9,0	1/1:15,0:15:6.36:19,6,0	1/1:7,16:23:42.14:1036,42,0	1/1:17,0:17:15.73:217,16,0	1/1:4,21:26:48.16:1198,48,0	0/0:31,0:31:75.24:0,75,1245	1/1:25,0:25:39.14:549,39,0	0/0:24,0:24:40.21:0,40,899	1/1:15,0:15:11.05:196,11,0	1/1:10,13:25:50.31:871,50,0	1/1:4,13:18:30.10:725,30,0	1/1:6,30:37:60.21:1499,60,0	1/1:13,0:13:8.55:79,9,0	1/1:4,19:23:48.16:1185,48,0	1/1:3,21:28:50.75:1149,51,0	1/1:8,0:8:3.01:52,3,0	1/1:13,19:33:66.23:1518,66,0	1/1:5,23:29:59.48:1455,59,0	1/1:3,10:15:33.11:812,33,0
chr10	90888871	.	G	GTGTGTGTGTA	7734.27	PASS	AB=0.995;AC=32;AF=0.571;AN=56;BaseQRankSum=9.443;DP=739;FS=7.835;HRun=0;HaplotypeScore=229.9301;InbreedingCoeff=0.0822;MQ=60.39;MQ0=9;MQRankSum=-1.775;QD=14.51;ReadPosRankSum=8.844;VQSLOD=1.1206;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:99:0,100,3340	0/0:5,0:5:15.04:0,15,354	0/0:47,0:21:44.07:0,44,699	0/0:54,0:27:38.31:0,38,743	0/1:27,0:27:12.06:12,0,104	0/1:24,0:24:10.80:87,0,11	0/1:32,0:32:62.27:62,0,96	0/1:40,0:38:99:202,0,219	0/1:36,0:36:48.74:49,0,74	1/1:1,16:19:54.16:1968,54,0	1/1:1,11:18:12.04:437,12,0	0/1:21,0:21:41.79:55,0,42	1/1:1,17:21:21.07:950,21,0	1/1:23,0:23:5.06:70,5,0	0/0:30,0:30:84.23:0,84,2262	1/1:2,19:23:42.62:2031,43,0	0/0:22,0:22:63.63:0,64,1772	1/1:2,12:17:14.72:532,15,0	0/1:24,0:24:93.85:94,0,183	0/1:17,0:17:2.11:96,0,2	0/1:36,0:36:41.54:42,0,72	1/1:1,10:15:6.02:274,6,0	1/1:22,0:21:5.11:96,5,0	0/1:29,0:29:25.67:26,0,97	1/1:1,6:12:3.01:158,3,0	0/1:30,2:32:99:388,0,107	0/1:29,0:29:41.23:56,0,41	1/1:15,0:15:12.19:50,12,0
chr10	90889288	.	TATATATATATATATATATATATATATATATATATATATACACACAC	T	24118.68	PASS	AB=0.667;AC=39;AF=0.813;AN=48;BaseQRankSum=5.873;DP=475;FS=0.000;HRun=0;HaplotypeScore=403.8086;InbreedingCoeff=0.5289;MQ=42.13;MQ0=1;MQRankSum=-2.469;QD=54.44;ReadPosRankSum=4.813;VQSLOD=1.8297;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:9.01:0,9,168	./.	0/0:3,0:2:2.90:0,3,16	0/0:5,0:1:3.01:0,3,115	1/1:6,20:26:15.05:1763,15,0	1/1:4,16:20:9.03:1059,9,0	1/1:7,0:7:0.47:1,0,0	1/1:18,0:18:6.01:130,6,0	1/1:7,11:18:11.29:1410,11,0	1/1:11,20:31:35.13:2839,35,0	1/1:12,14:26:2.98:353,3,0	1/1:7,16:23:12.04:1411,12,0	1/1:6,16:22:21.07:2470,21,0	1/1:10,7:17:2.46:352,2,0	./.	1/1:6,8:14:9.03:1059,9,0	0/0:8,0:8:18.06:0,18,1710	0/1:7,7:14:99:347,0,357	1/1:5,8:13:24.05:1033,24,0	1/1:16,19:35:14.92:1764,15,0	./.	1/1:9,13:22:15.05:1764,15,0	1/1:10,17:27:18.06:2117,18,0	1/1:6,13:18:8.27:858,8,0	1/1:9,13:22:3.01:353,3,0	1/1:11,19:30:20.70:944,21,0	1/1:12,27:39:18.06:2093,18,0	./.
chr10	90889326	.	TACACACAC	T	5651.17	PASS	AB=1.000;AC=41;AF=0.788;AN=52;BaseQRankSum=6.381;DP=348;FS=47.095;HRun=0;HaplotypeScore=180.8274;InbreedingCoeff=0.5736;MQ=48.44;MQ0=4;MQRankSum=-2.893;QD=18.47;ReadPosRankSum=4.967;VQSLOD=2.2884;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:12.04:0,12,350	./.	0/0:15,0:2:6.02:0,6,223	0/0:7,0:4:6.49:0,6,178	1/1:20,0:20:15.05:320,15,0	1/1:16,0:16:9.03:193,9,0	1/1:0,13:13:2.22:69,2,0	1/1:0,13:13:39.11:809,39,0	1/1:11,0:11:11.74:257,12,0	1/1:20,0:20:30.06:684,30,0	1/1:15,1:16:3.01:64,3,0	1/1:16,0:16:12.04:257,12,0	1/1:16,0:16:21.07:449,21,0	1/1:8,1:9:2.93:64,3,0	0/0:1,0:1:3.01:0,3,96	1/1:8,0:8:9.03:193,9,0	0/0:12,0:12:30.10:0,30,919	0/1:9,0:9:56.68:57,0,75	1/1:10,0:10:15.03:358,15,0	1/1:20,0:20:15.05:321,15,0	1/1:1,5:6:0.47:1,0,0	1/1:13,0:13:15.05:321,15,0	1/1:17,0:17:18.06:385,18,0	1/1:13,0:13:6.02:128,6,0	1/1:13,0:13:3.01:64,3,0	1/1:19,0:19:15.03:275,15,0	1/1:28,0:28:18.06:384,18,0	./.
chr10	90892420	.	TAG	T	14860.73	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=14.252;DP=705;FS=6.733;HRun=0;HaplotypeScore=88.0994;InbreedingCoeff=0.9994;MQ=87.19;MQ0=0;MQRankSum=-4.027;QD=41.51;ReadPosRankSum=2.543;VQSLOD=6.7562;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,2729	0/0:12,0:11:33.11:0,33,631	0/0:27,0:27:75.26:0,75,1429	0/0:22,0:22:66.23:0,66,1228	1/1:1,21:22:60.20:912,60,0	1/1:0,23:23:63.21:965,63,0	1/1:0,26:26:75.25:1149,75,0	1/1:0,32:32:96.33:1462,96,0	1/1:0,30:30:84.29:1287,84,0	0/0:29,0:29:87.30:0,87,1681	0/0:23,0:23:54.19:0,54,1043	1/1:0,23:23:56.98:873,57,0	0/0:22,0:22:63.22:0,63,1209	1/1:2,18:20:48.16:735,48,0	0/0:31,0:31:93.32:0,93,1797	0/0:28,1:29:38.34:0,38,1508	0/0:29,0:29:84.29:0,84,1589	0/0:19,0:19:57.20:0,57,1099	1/1:1,13:14:39.13:597,39,0	1/1:0,23:23:60.20:918,60,0	1/1:4,24:28:63.21:965,63,0	0/0:36,0:36:99:0,108,2078	1/1:0,20:20:57.19:873,57,0	1/1:0,35:35:93.32:1424,93,0	0/0:18,0:18:51.15:0,51,950	1/1:1,25:26:75.25:1149,75,0	1/1:0,29:29:81.28:1241,81,0	1/1:0,7:7:21.07:313,21,0
chr10	90892774	.	GATTT	G	3012.86	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=3.491;DP=409;FS=5.483;HRun=0;HaplotypeScore=63.8214;InbreedingCoeff=0.9057;MQ=39.69;MQ0=31;MQRankSum=-6.283;QD=31.38;ReadPosRankSum=-0.340;VQSLOD=2.6197;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:57.07:0,57,1190	0/0:8,0:6:15.05:0,15,404	0/0:11,0:1:0:0,0,0	0/0:5,0:2:0:0,0,0	0/0:12,0:12:30.10:0,30,804	0/0:17,0:15:30.08:0,30,707	0/0:12,0:10:11.96:0,12,260	0/0:32,0:29:75.20:0,75,1884	0/0:11,0:10:24.07:0,24,593	1/1:1,21:21:57.17:985,57,0	1/1:1,13:14:18.05:311,18,0	0/0:15,0:14:30.09:0,30,705	1/1:1,8:9:18.06:340,18,0	0/0:12,0:11:24.07:0,24,559	0/0:10,0:10:18.05:0,18,430	1/1:3,9:10:21.07:398,21,0	0/0:24,0:22:36.09:0,36,860	1/1:2,12:14:24.04:455,24,0	0/0:10,0:9:24.08:0,24,643	0/0:19,0:18:36.12:0,36,905	0/0:4,0:3:5.93:0,6,66	1/1:2,9:10:17.89:261,18,0	0/0:11,0:11:30:0,30,643	0/0:10,0:9:15.05:0,15,365	1/1:1,11:12:24.08:454,24,0	0/0:19,0:18:43.87:0,44,1232	0/0:17,0:17:36.12:0,36,912	0/0:23,0:15:42.14:0,42,1121
chr10	90894239	.	CT	C	13246.42	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=9.427;DP=634;FS=3.104;HRun=6;HaplotypeScore=65.7555;InbreedingCoeff=0.9749;MQ=76.68;MQ0=0;MQRankSum=-2.620;QD=27.20;ReadPosRankSum=1.134;VQSLOD=5.5607;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,1745	0/0:8,0:8:21.06:0,21,262	0/0:23,0:22:60.16:0,60,715	0/0:19,0:18:48.13:0,48,561	1/1:0,25:25:60.15:645,60,0	1/1:0,21:21:60.15:645,60,0	1/1:2,29:31:75.18:806,75,0	1/1:3,38:41:99:1216,114,0	1/1:2,19:21:54.13:580,54,0	1/1:0,22:22:66.15:701,66,0	1/1:1,6:7:18.05:193,18,0	1/1:1,15:16:36.09:387,36,0	1/1:0,13:13:32.96:355,33,0	1/1:2,21:23:57.14:613,57,0	0/0:22,0:22:66.21:0,66,869	1/1:1,17:18:48.12:516,48,0	0/0:29,0:29:81.26:0,81,1066	1/1:0,28:28:75.19:806,75,0	1/1:3,16:19:48.12:515,48,0	1/1:1,20:21:51.12:548,51,0	1/1:2,30:32:81.20:871,81,0	1/1:1,20:21:39.10:419,39,0	1/1:1,10:11:18.05:193,18,0	1/1:2,44:46:99:1419,132,0	1/1:1,17:18:39.10:419,39,0	1/1:2,27:29:81.16:852,81,0	1/1:0,18:18:45.11:483,45,0	1/1:1,5:6:6.01:64,6,0
chr10	90894814	.	A	ATTT	4424.26	PASS	AB=0.629;AC=34;AF=0.607;AN=56;BaseQRankSum=6.039;DP=631;FS=2.902;HRun=11;HaplotypeScore=109.1245;InbreedingCoeff=0.1467;MQ=75.07;MQ0=0;MQRankSum=-3.163;QD=8.92;ReadPosRankSum=-2.910;VQSLOD=1.3519;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:47:99:0,99,1168	0/0:6,0:7:16.60:0,17,208	0/1:14,0:15:6.71:7,0,155	0/0:16,0:16:6.39:0,6,188	1/1:3,0:14:16.40:78,16,0	0/1:11,0:33:7.14:26,0,7	0/1:7,0:27:9.75:10,0,92	0/1:10,0:24:43.21:51,0,43	0/1:3,0:14:7.12:7,0,36	1/1:4,13:23:54.02:763,54,0	1/1:7,8:15:20.99:308,21,0	0/1:7,0:21:15.36:36,0,15	1/1:5,12:22:40.34:652,40,0	1/1:8,0:28:17.55:39,18,0	0/0:25,0:25:65.16:0,65,720	1/1:3,17:27:47.56:700,48,0	0/0:38,0:39:96.11:0,96,1103	1/1:4,17:26:18.96:701,19,0	0/1:10,0:23:44.70:58,0,45	0/1:5,0:22:45.70:47,0,46	0/1:4,0:31:17.37:17,0,39	1/1:4,8:12:18.03:248,18,0	0/1:3,0:10:5.39:6,0,5	0/1:11,0:30:48.16:48,0,120	1/1:2,14:18:27.09:508,27,0	1/1:7,0:21:20.86:64,21,0	0/1:7,0:27:31.91:32,0,77	1/1:1,0:12:7.48:16,7,0
chr10	90895349	.	TC	T	3465.34	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-8.430;DP=616;FS=0.367;HRun=9;HaplotypeScore=93.6971;InbreedingCoeff=0.9632;MQ=79.32;MQ0=0;MQRankSum=-1.661;QD=24.23;ReadPosRankSum=0.735;VQSLOD=3.8089;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.26:0,96,1087	0/0:12,0:12:33.07:0,33,362	0/0:22,1:22:27.60:0,28,410	0/0:21,1:20:6.86:0,7,324	0/0:29,1:30:27.35:0,27,404	0/0:21,0:21:52.08:0,52,297	0/0:23,0:23:31.59:0,32,277	0/0:25,0:25:8.04:0,8,199	0/0:21,0:21:52.58:0,53,321	1/1:3,21:24:62.99:565,63,0	1/1:0,14:14:39.02:357,39,0	0/0:21,0:21:54.95:0,55,314	1/1:3,22:25:66.02:601,66,0	0/0:13,0:13:37.52:0,38,209	0/0:29,0:29:75.14:0,75,830	1/1:2,17:19:51.02:467,51,0	0/0:24,0:24:60.18:0,60,692	1/1:0,18:18:51.01:461,51,0	0/0:18,0:18:43.10:0,43,235	0/0:18,0:18:24.39:0,24,219	0/0:23,0:23:40.99:0,41,319	1/1:4,14:18:42.02:384,42,0	0/0:24,0:24:55.38:0,55,320	0/0:26,0:26:47.96:0,48,362	1/1:2,23:25:69.04:631,69,0	0/0:34,1:35:31.02:0,31,399	0/0:17,0:17:43.73:0,44,258	0/0:13,0:13:10.79:0,11,155
chr10	90895897	.	CTG	C	14205.65	PASS	AB=0.522;AC=29;AF=0.518;AN=56;BaseQRankSum=17.580;DP=1026;FS=7.041;HRun=0;HaplotypeScore=140.8301;InbreedingCoeff=0.9470;MQ=59.71;MQ0=15;MQRankSum=3.444;QD=25.60;ReadPosRankSum=2.968;VQSLOD=5.5964;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:85.98:0,86,1395	0/0:17,0:17:36.12:0,36,608	0/0:49,0:18:12.96:0,13,546	0/0:64,0:37:68.79:0,69,971	1/1:3,23:26:60.20:779,60,0	1/1:5,24:29:51.17:663,51,0	1/1:1,39:40:93.29:1208,93,0	1/1:11,34:45:99:1243,102,0	1/1:6,29:34:24.26:885,24,0	0/0:53,0:53:99:0,129,2107	0/0:26,0:26:54.18:0,54,880	1/1:3,22:24:51.17:663,51,0	0/0:31,0:31:87.28:0,87,1451	1/1:3,26:29:54.17:697,54,0	0/0:39,0:39:96.25:0,96,1517	0/0:30,0:30:81.24:0,81,1314	0/0:33,1:33:31.11:0,31,1064	0/0:20,0:20:54.16:0,54,873	1/1:6,24:29:66.06:745,66,0	1/1:3,38:39:84.25:1091,84,0	1/1:11,76:86:99:1899,139,0	0/0:32,0:32:78.25:0,78,1290	1/1:4,22:25:41.84:526,42,0	1/1:6,52:58:99:1521,117,0	0/0:33,0:33:81.26:0,81,1347	1/1:6,44:49:30.41:1474,30,0	1/1:3,19:21:28.76:529,29,0	0/1:1,11:12:3.38:285,0,3
chr10	90896005	.	TTCTC	T	11628.33	PASS	AB=0.602;AC=34;AF=0.607;AN=56;BaseQRankSum=-3.390;DP=932;FS=19.613;HRun=0;HaplotypeScore=186.8451;InbreedingCoeff=0.6033;MQ=59.04;MQ0=9;MQRankSum=-0.720;QD=18.00;ReadPosRankSum=-0.676;VQSLOD=3.1610;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,104,2286	0/0:14,0:14:27.08:0,27,497	0/0:42,0:30:23.94:0,24,505	0/0:55,0:32:17.47:0,17,215	1/1:5,17:24:35.72:466,36,0	1/1:11,17:28:33.11:540,33,0	0/1:16,24:38:1.76:673,0,2	1/1:22,17:39:50.43:666,50,0	1/1:10,25:36:57.19:898,57,0	0/1:17,1:46:5.61:6,0,293	0/0:4,0:27:45.41:0,45,242	1/1:20,17:37:50.76:723,51,0	0/1:12,2:34:75.99:76,0,154	1/1:10,18:32:39.12:596,39,0	0/0:34,0:36:62.67:0,63,1361	0/1:11,2:38:8.18:8,0,186	0/0:31,1:36:37.05:0,37,1602	0/1:7,1:21:29.41:29,0,68	1/1:14,11:24:32.96:409,33,0	1/1:8,25:34:56.73:887,57,0	1/1:31,18:49:90.10:1259,90,0	0/0:6,0:22:35.03:0,35,166	1/1:9,7:18:18.03:270,18,0	1/1:19,26:45:93.18:1368,93,0	0/1:5,2:17:72.64:73,0,76	1/1:7,31:41:99:1474,101,0	1/1:8,12:20:27.98:443,28,0	1/1:3,16:19:48.16:765,48,0
chr10	90898717	.	G	GA	823.29	PASS	AB=0.995;AC=39;AF=0.722;AN=54;BaseQRankSum=-3.938;DP=465;FS=21.330;HRun=7;HaplotypeScore=102.8464;InbreedingCoeff=-0.0364;MQ=39.42;MQ0=10;MQRankSum=-2.179;QD=1.89;ReadPosRankSum=1.230;VQSLOD=-0.5064;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:17.72:18,0,22	1/1:11,0:11:10.82:30,11,0	0/0:7,0:1:2.22:0,2,7	./.	1/1:22,1:23:18.03:102,18,0	1/1:15,0:15:18.60:100,19,0	0/1:15,0:15:7.67:62,0,8	1/1:20,0:19:2.67:8,3,0	0/1:15,0:15:0.21:38,0,0	0/1:23,0:23:5.52:10,0,6	0/1:17,0:17:2.20:2,0,3	1/1:15,0:15:12.47:95,12,0	1/1:13,0:13:5.47:37,5,0	1/1:8,0:8:6.07:19,6,0	0/1:12,0:12:7.79:8,0,14	0/1:14,0:14:3.77:4,0,26	0/1:22,0:21:9.72:10,0,28	1/1:15,0:15:3.55:48,4,0	1/1:20,0:20:4.73:51,5,0	0/1:24,0:24:6.48:21,0,6	0/0:8,0:8:0.16:0,0,1	0/1:15,0:15:3.63:7,0,4	1/1:25,1:26:4.50:30,5,0	1/1:26,1:26:16.33:135,16,0	0/1:15,1:16:10.18:35,0,10	1/1:13,0:13:3.66:16,4,0	1/1:13,0:9:5.64:48,6,0	1/1:14,0:14:3.62:19,4,0
chr10	90899613	.	TTGTG	T	2005.45	PASS	AB=0.820;AC=41;AF=0.820;AN=50;BaseQRankSum=5.627;DP=380;FS=0.000;HRun=0;HaplotypeScore=92.7658;InbreedingCoeff=0.3355;MQ=59.80;MQ0=24;MQRankSum=-3.354;QD=7.46;ReadPosRankSum=2.600;VQSLOD=1.8873;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:35:34.99:0,35,658	0/0:4,0:4:6.01:0,6,92	./.	./.	1/1:6,5:11:15.01:207,15,0	1/1:7,8:15:3.01:47,3,0	1/1:8,4:11:9.03:140,9,0	./.	1/1:11,0:10:3.01:47,3,0	1/1:7,0:10:9.01:84,9,0	1/1:5,0:14:15.73:111,16,0	0/1:4,3:7:24.13:128,0,24	1/1:6,0:9:11.90:95,12,0	1/1:4,4:8:6.02:93,6,0	0/1:5,0:12:2.03:2,0,152	1/1:3,0:8:9.01:83,9,0	0/0:22,0:21:18.64:0,19,338	1/1:6,0:8:5.97:48,6,0	1/1:9,0:9:1.29:25,1,0	1/1:5,3:8:3.01:47,3,0	1/1:25,0:20:6.01:72,6,0	1/1:3,0:7:5.97:54,6,0	1/1:5,4:7:9.03:140,9,0	0/1:17,4:22:29.53:239,0,30	1/1:6,0:18:32.29:236,32,0	1/1:16,4:21:9.02:113,9,0	1/1:11,3:14:3.01:47,3,0	1/1:6,0:6:5.90:93,6,0
chr10	90899879	.	CTT	C	4587.74	PASS	AB=0.526;AC=29;AF=0.518;AN=56;BaseQRankSum=-0.216;DP=538;FS=2.332;HRun=14;HaplotypeScore=76.0749;InbreedingCoeff=0.8933;MQ=69.33;MQ0=0;MQRankSum=-0.666;QD=15.40;ReadPosRankSum=5.217;VQSLOD=4.1602;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,1:32:42.51:0,43,281	0/0:1,0:6:12.48:0,12,43	0/0:22,0:18:1.34:0,1,193	0/0:20,0:16:14.83:0,15,110	1/1:6,17:23:41.06:387,41,0	1/1:3,14:17:25.73:248,26,0	1/1:4,14:20:17.55:197,18,0	1/1:18,11:29:5.81:221,6,0	1/1:2,15:19:29.61:307,30,0	0/0:23,0:23:60.05:0,60,702	0/0:13,0:13:24.05:0,24,280	1/1:2,12:14:24.01:222,24,0	0/0:14,0:14:23.95:0,24,272	1/1:5,12:17:23.92:222,24,0	0/0:5,1:13:17.98:0,18,94	0/0:17,0:18:35.52:0,36,413	0/0:7,0:23:50.69:0,51,192	0/0:20,0:21:56.14:0,56,696	1/1:6,20:26:56.65:499,57,0	1/1:3,13:16:22.59:268,23,0	1/1:4,16:20:48.02:444,48,0	0/0:14,0:15:36.03:0,36,458	1/1:4,9:14:26.46:218,26,0	1/1:9,26:35:59.98:555,60,0	0/0:18,0:17:42.04:0,42,500	1/1:5,14:19:32.83:352,33,0	1/1:6,12:18:33:303,33,0	0/1:1,9:10:3.89:146,0,4
chr10	90902636	.	TTCTCTTTCTCTC	T	2782.43	PASS	AB=0.786;AC=22;AF=0.423;AN=52;BaseQRankSum=2.090;DP=412;FS=2.005;HRun=0;HaplotypeScore=122.4387;InbreedingCoeff=0.7702;MQ=68.28;MQ0=13;MQRankSum=-1.381;QD=16.76;ReadPosRankSum=-0.467;VQSLOD=2.6797;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:38.20:0,38,962	0/0:8,0:8:18.03:0,18,246	0/1:26,0:14:4.77:5,0,168	0/0:37,0:17:17.78:0,18,176	1/1:3,9:13:2.63:15,3,0	1/1:9,0:9:21:330,21,0	0/0:0,1:11:0:0,0,0	1/1:20,0:16:42.40:361,42,0	1/1:1,6:8:5.84:170,6,0	0/0:21,0:19:47.94:0,48,1085	0/0:13,0:13:34.93:0,35,482	1/1:2,7:9:9.03:322,9,0	0/0:7,0:6:17.86:0,18,422	./.	0/0:21,0:21:50.44:0,50,1516	0/0:12,0:12:30.05:0,30,617	0/0:20,0:18:51.05:0,51,1685	0/0:9,0:9:24.05:0,24,861	1/1:12,0:13:29.97:338,30,0	0/0:0,9:11:0:0,0,0	./.	0/0:7,0:7:18.02:0,18,231	0/1:3,8:12:0:0,0,0	1/1:16,0:15:29.48:253,29,0	0/0:18,0:17:47.80:0,48,592	1/1:0,13:14:38.96:741,39,0	1/1:2,14:16:2.37:106,2,0	1/1:1,6:9:11.99:328,12,0
chr10	90902690	.	C	CTCTCTGTGTGTG	5922.34	PASS	AB=0.964;AC=33;AF=0.611;AN=54;BaseQRankSum=1.049;DP=451;FS=77.054;HRun=0;HaplotypeScore=151.6611;InbreedingCoeff=0.0690;MQ=40.29;MQ0=30;MQRankSum=-0.989;QD=16.78;ReadPosRankSum=-1.522;VQSLOD=0.9917;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:23:26.15:0,26,548	0/0:8,0:7:9.03:0,9,185	./.	0/0:8,0:4:0.05:0,0,17	1/1:14,0:14:9.03:274,9,0	1/1:12,0:9:6.02:191,6,0	1/1:28,0:26:12.18:263,12,0	1/1:14,0:14:23.11:442,23,0	0/1:12,0:12:15.36:183,0,15	0/1:19,0:20:99:631,0,168	0/1:12,0:12:62.86:63,0,70	0/1:13,0:13:25.39:315,0,25	0/1:10,0:9:40.36:98,0,40	1/1:15,0:14:12.51:380,13,0	0/0:27,0:25:42.13:0,42,733	0/1:18,0:15:50.40:246,0,50	0/0:26,0:21:52.98:0,53,838	1/1:10,0:10:14.94:275,15,0	0/1:6,0:6:21.47:52,0,21	1/1:21,0:21:18.45:573,18,0	1/1:27,0:25:11.99:270,12,0	1/1:11,0:10:6.02:155,6,0	1/1:12,0:11:6.02:191,6,0	0/1:17,4:26:0:0,0,0	1/1:13,0:11:3.01:98,3,0	0/1:22,0:21:87:465,0,87	0/1:13,0:12:8.29:401,0,8	0/1:18,0:16:55.21:358,0,55
chr10	90905179	.	A	AACACAC	3993.34	PASS	AB=0.760;AC=40;AF=0.741;AN=54;BaseQRankSum=-0.449;DP=638;FS=6.347;HRun=0;HaplotypeScore=148.5714;InbreedingCoeff=0.4169;MQ=63.78;MQ0=13;MQRankSum=-3.640;QD=8.20;ReadPosRankSum=-4.665;VQSLOD=0.3712;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:36:36.08:0,36,573	0/0:8,0:9:18.06:0,18,329	1/1:33,0:13:1.25:3,1,0	./.	1/1:10,0:16:2.14:37,2,0	1/1:14,5:20:6.02:194,6,0	1/1:18,2:26:9.03:170,9,0	1/1:26,0:26:18.84:194,19,0	0/1:11,0:22:23.18:205,0,23	1/1:9,0:15:21.95:286,22,0	1/1:9,6:18:6.02:92,6,0	1/1:10,0:24:8.74:112,9,0	1/1:8,4:16:9.03:249,9,0	1/1:11,0:24:11.17:152,11,0	0/0:20,0:28:58.07:0,58,991	1/1:9,7:22:18.09:423,18,0	0/0:26,0:31:51.17:0,51,957	1/1:13,5:22:18.88:356,19,0	0/1:14,0:14:45.45:65,0,45	1/1:9,0:16:11.17:151,11,0	0/1:22,0:39:99:135,0,142	1/1:7,0:14:3.01:39,3,0	1/1:5,0:15:9.44:113,9,0	0/1:25,0:41:59.23:59,0,91	1/1:8,0:16:15.05:259,15,0	1/1:9,0:24:39.13:608,39,0	1/1:13,0:21:7.12:89,7,0	0/0:7,0:14:2.65:0,3,5
chr10	90906420	.	CACA	C	11072.44	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=17.006;DP=547;FS=2.809;HRun=0;HaplotypeScore=103.9518;InbreedingCoeff=0.9876;MQ=86.06;MQ0=0;MQRankSum=-9.541;QD=40.56;ReadPosRankSum=1.914;VQSLOD=6.2895;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.26:0,81,1695	0/0:6,0:6:18.06:0,18,401	0/0:24,0:24:63.18:0,63,1337	0/0:27,0:27:56.64:0,57,1182	1/1:1,26:27:69.24:1122,69,0	1/1:0,20:20:60.15:944,60,0	1/1:2,9:11:21.07:342,21,0	1/1:1,20:21:53.97:774,54,0	1/1:1,13:14:36.12:586,36,0	0/0:27,0:27:81.28:0,81,1806	0/0:28,0:28:81.25:0,81,1691	1/1:1,17:18:45.15:733,45,0	0/0:24,0:24:69.20:0,69,1446	1/1:0,17:17:45.10:703,45,0	0/0:10,0:10:30.10:0,30,669	0/0:19,0:19:57.18:0,57,1232	0/0:23,0:23:69.24:0,69,1522	0/0:19,0:19:51.17:0,51,1108	1/1:1,18:19:51.12:779,51,0	1/1:1,17:18:48.16:782,48,0	1/1:2,10:12:27.09:441,27,0	0/0:17,0:17:51.18:0,51,1120	1/1:1,17:18:54.18:870,54,0	1/1:0,7:7:18.06:293,18,0	0/0:22,0:21:63.21:0,63,1365	1/1:1,25:26:8.21:1074,8,0	1/1:4,27:31:66.16:1044,66,0	1/1:1,13:14:36.12:587,36,0
chr10	90906505	.	ACATG	A	6253.73	PASS	AB=0.528;AC=29;AF=0.518;AN=56;BaseQRankSum=14.094;DP=481;FS=14.986;HRun=0;HaplotypeScore=132.4346;InbreedingCoeff=0.8483;MQ=60.08;MQ0=0;MQRankSum=-13.548;QD=29.78;ReadPosRankSum=0.890;VQSLOD=3.8049;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:78.22:0,78,1863	0/0:17,0:17:51.18:0,51,1299	0/0:11,0:10:16.13:0,16,172	0/0:8,0:6:8.50:0,8,104	1/1:4,25:29:51.17:907,51,0	1/1:2,16:16:33.11:587,33,0	1/1:2,8:10:18.06:320,18,0	1/1:11,6:17:17.99:205,18,0	1/1:0,10:9:24.08:427,24,0	0/0:37,0:37:99:0,102,2570	0/0:22,0:22:51.18:0,51,1305	1/1:1,6:7:9.03:160,9,0	0/0:14,0:14:36.11:0,36,854	1/1:2,9:11:12.04:213,12,0	0/0:14,0:14:39.13:0,39,965	0/0:19,0:19:54.19:0,54,1323	0/0:33,0:33:93.32:0,93,2328	0/0:22,0:22:54.11:0,54,1236	1/1:3,7:10:24.07:400,24,0	1/1:3,22:25:45.15:800,45,0	1/1:4,1:5:3.01:53,3,0	0/0:18,0:18:36.12:0,36,894	1/1:5,12:17:15.05:265,15,0	1/1:0,5:5:2.82:53,3,0	0/0:22,0:22:48.16:0,48,1233	0/1:2,17:19:97.70:849,0,98	1/1:6,15:21:45.15:800,45,0	1/1:1,5:6:12.04:213,12,0
chr10	90906564	.	AACAC	A	5606.69	PASS	AB=0.581;AC=29;AF=0.518;AN=56;BaseQRankSum=7.940;DP=504;FS=3.679;HRun=0;HaplotypeScore=142.9429;InbreedingCoeff=0.8906;MQ=55.29;MQ0=9;MQRankSum=-11.358;QD=26.08;ReadPosRankSum=-3.324;VQSLOD=4.3106;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:87.25:0,87,1839	0/0:13,0:13:21.05:0,21,419	0/0:39,0:15:21.07:0,21,452	0/0:29,0:15:23.58:0,24,384	1/1:9,16:24:47.90:623,48,0	1/1:7,8:14:32.93:406,33,0	1/1:4,7:11:27:366,27,0	1/1:11,18:28:50.37:660,50,0	1/1:6,10:15:32.94:432,33,0	0/0:10,0:24:52.97:0,53,883	0/0:8,0:18:24.52:0,25,365	1/1:2,9:11:27.02:394,27,0	0/0:6,0:10:24.08:0,24,420	1/1:2,8:10:26.81:242,27,0	0/0:12,0:13:35.86:0,36,733	0/0:10,0:17:28.34:0,28,457	0/0:29,0:29:72.22:0,72,1512	0/0:6,0:21:30.10:0,30,528	1/1:7,8:13:27.08:400,27,0	1/1:9,8:18:29.93:382,30,0	1/1:0,5:4:2.98:21,3,0	0/0:4,0:17:27.09:0,27,475	1/1:7,9:15:32.81:341,33,0	1/1:2,1:3:2.92:17,3,0	0/0:5,0:19:38.85:0,39,661	0/1:5,13:18:3.92:588,0,4	1/1:6,13:19:41.97:583,42,0	1/1:0,3:3:9.03:151,9,0
chr10	90906606	.	C	CTTTT	7263.32	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=3.891;DP=454;FS=9.531;HRun=3;HaplotypeScore=150.5941;InbreedingCoeff=0.8468;MQ=46.34;MQ0=18;MQRankSum=-9.481;QD=28.82;ReadPosRankSum=-2.321;VQSLOD=0.6830;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:38.74:0,39,653	0/0:9,0:8:17.82:0,18,238	0/0:16,0:8:20.73:0,21,222	0/1:10,0:7:27.56:28,0,34	1/1:30,5:34:77.88:919,78,0	1/1:10,3:12:30.01:460,30,0	1/1:7,5:11:24.05:468,24,0	1/1:25,1:24:56.87:727,57,0	1/1:14,3:17:39.12:614,39,0	0/0:25,0:25:65.85:0,66,811	0/0:11,0:11:23.44:0,23,353	1/1:12,2:14:30.05:397,30,0	0/0:16,0:15:21.59:0,22,374	1/1:8,1:9:26.61:280,27,0	0/0:11,0:10:23.10:0,23,372	0/0:12,0:11:26.29:0,26,322	0/0:24,0:23:3.70:0,4,406	0/0:19,0:18:27.16:0,27,495	1/1:21,2:20:41.98:568,42,0	1/1:20,7:27:69.20:950,69,0	1/1:8,0:4:2.80:13,3,0	0/0:14,0:13:36.11:0,36,578	1/1:12,4:14:35.91:436,36,0	0/0:0,7:6:0:0,0,0	0/0:13,0:13:27.56:0,28,432	1/1:15,2:16:41.86:504,42,0	1/1:17,3:20:51:760,51,0	1/1:4,1:3:9:139,9,0
chr10	90906609	.	TC	T	1649.47	PASS	AB=0.990;AC=27;AF=0.482;AN=56;BaseQRankSum=4.508;DP=427;FS=12.558;HRun=1;HaplotypeScore=96.8688;InbreedingCoeff=0.4714;MQ=46.52;MQ0=20;MQRankSum=-7.865;QD=6.06;ReadPosRankSum=0.075;VQSLOD=-0.6729;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:16.86:0,17,308	0/0:9,0:8:11.90:0,12,97	0/0:13,0:7:20.46:0,20,155	0/1:9,0:6:13.46:13,0,18	1/1:31,0:30:47.60:298,48,0	0/1:13,0:12:2.42:87,0,2	1/1:10,1:10:19.73:124,20,0	1/1:22,0:21:24.23:256,24,0	1/1:16,0:16:26.01:147,26,0	0/0:24,0:24:53.61:0,54,332	0/0:9,1:10:19.73:0,20,111	0/1:13,0:13:5.97:95,0,6	0/1:15,0:14:21.86:22,0,103	1/1:10,0:9:9.74:77,10,0	0/0:11,0:10:28.88:0,29,252	0/0:11,0:10:11.23:0,11,108	0/1:24,2:25:7.07:7,0,247	0/0:20,0:18:13.52:0,14,163	0/1:20,0:18:8.58:149,0,9	1/1:25,0:25:8.39:142,8,0	1/1:7,0:3:2.68:11,3,0	0/0:14,0:13:33.32:0,33,215	0/1:14,0:12:32.08:51,0,32	0/0:7,0:6:3.07:0,3,11	0/0:14,0:13:22.02:0,22,183	1/1:18,0:17:24.55:167,25,0	1/1:16,1:17:24.75:172,25,0	1/1:5,0:3:6.08:28,6,0
chr10	90907960	.	GTCTC	G	3413.90	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=4.059;DP=601;FS=23.297;HRun=0;HaplotypeScore=137.6811;InbreedingCoeff=0.0465;MQ=50.90;MQ0=22;MQRankSum=-0.731;QD=10.91;ReadPosRankSum=0.163;VQSLOD=1.6533;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:37:77.93:0,78,2006	0/0:15,0:15:42.13:0,42,985	0/0:15,0:2:3.01:0,3,42	0/0:30,0:5:8.82:0,9,93	0/1:17,0:17:7.31:120,0,7	1/1:3,25:26:32.16:605,32,0	1/1:4,12:13:3.01:52,3,0	1/1:32,0:27:68.76:860,69,0	0/1:13,0:13:80.78:84,0,81	0/0:27,0:26:69.22:0,69,1629	0/0:16,0:16:33.10:0,33,780	0/1:21,0:21:75.12:106,0,75	0/0:14,0:14:39.13:0,39,1028	0/1:17,0:16:55.32:137,0,55	0/0:21,0:20:51.17:0,51,1213	0/0:29,0:29:83.82:0,84,2062	0/0:25,0:25:59.27:0,59,1249	0/0:14,0:14:39.07:0,39,845	0/1:16,0:15:19.01:316,0,19	0/1:27,0:25:32.51:211,0,33	0/1:23,0:23:44.16:168,0,44	0/0:23,0:23:69.18:0,69,1531	1/1:20,0:20:2.90:220,3,0	0/1:19,0:18:77.18:77,0,80	0/0:19,0:19:51.16:0,51,1121	0/1:18,0:16:51.72:135,0,52	0/1:28,0:27:99:212,0,234	0/1:18,0:18:99:111,0,116
chr10	90907964	.	C	CTG	8730.49	PASS	AB=0.629;AC=21;AF=0.375;AN=56;BaseQRankSum=-2.317;DP=607;FS=24.758;HRun=0;HaplotypeScore=102.6702;InbreedingCoeff=0.3145;MQ=50.20;MQ0=24;MQRankSum=-2.787;QD=26.46;ReadPosRankSum=2.164;VQSLOD=3.3606;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:38:65.10:0,65,1271	0/0:15,0:15:42.13:0,42,620	0/0:13,0:1:3.01:0,3,42	0/0:26,0:3:8.82:0,9,93	1/1:6,14:19:24.08:462,24,0	0/1:29,0:26:13.02:24,0,13	1/1:16,0:13:2.80:13,3,0	1/1:10,24:29:69.69:1226,70,0	0/1:7,6:13:64.04:344,0,64	0/0:24,0:23:69.22:0,69,1021	0/0:13,0:13:33.10:0,33,483	1/1:4,16:20:42.13:778,42,0	0/0:13,0:13:39.13:0,39,596	0/1:8,9:16:99:447,0,117	0/0:20,0:19:54.17:0,54,801	0/0:29,0:29:83.97:0,84,1284	0/0:24,0:24:60:0,60,821	0/0:13,0:13:39.07:0,39,546	1/1:4,16:19:34.06:716,34,0	0/1:4,23:25:3.70:693,0,4	0/1:6,17:22:10:595,0,10	0/0:26,0:26:69.18:0,69,971	0/1:3,19:21:9.66:578,0,10	0/1:1,18:18:15.67:490,0,16	0/0:20,0:20:51.16:0,51,758	0/1:6,13:17:8.30:508,0,8	0/1:7,23:28:95.78:1080,0,96	1/1:7,14:21:16.89:778,17,0
chr10	90907982	.	GTC	G	1708.11	PASS	AB=0.805;AC=14;AF=0.269;AN=52;BaseQRankSum=1.986;DP=600;FS=10.399;HRun=0;HaplotypeScore=130.6244;InbreedingCoeff=-0.3697;MQ=50.06;MQ0=24;MQRankSum=-1.873;QD=5.35;ReadPosRankSum=-4.582;VQSLOD=0.6027;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:48:87.41:0,87,1708	0/0:16,0:15:44.94:0,45,757	./.	./.	0/1:12,9:20:61.80:62,0,185	0/1:25,5:27:4.61:5,0,510	0/0:11,2:10:2.92:0,3,17	0/1:19,11:24:99:275,0,125	0/1:5,11:16:99:179,0,170	0/0:27,0:25:69.23:0,69,1192	0/0:16,0:15:36.11:0,36,603	0/1:18,3:21:99:113,0,382	0/0:14,0:14:39.13:0,39,679	0/1:9,10:18:91.41:144,0,91	0/0:25,0:24:69.24:0,69,1192	0/0:28,0:28:72.23:0,72,1238	0/0:25,0:25:64.94:0,65,1033	0/0:13,0:13:39.11:0,39,658	0/1:17,0:16:64.53:65,0,247	0/1:19,6:23:99:99,0,208	0/1:22,4:24:99:124,0,282	0/0:24,0:24:63.20:0,63,1081	0/1:16,4:19:55.88:56,0,198	0/1:18,2:19:99:165,0,269	0/0:18,0:18:39.13:0,39,665	0/1:14,5:17:99:288,0,103	0/1:25,8:31:99:169,0,512	0/1:18,4:21:99:115,0,363
chr10	90909320	.	TG	T	3531.18	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=11.286;DP=329;FS=6.522;HRun=1;HaplotypeScore=55.7812;InbreedingCoeff=0.9244;MQ=75.65;MQ0=0;MQRankSum=-5.255;QD=27.16;ReadPosRankSum=-0.571;VQSLOD=2.8811;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:78.27:0,78,887	0/0:5,0:5:15.03:0,15,166	0/0:18,0:9:21.24:0,21,154	0/0:16,1:16:17.22:0,17,255	1/1:2,8:10:18.87:204,19,0	1/1:2,10:12:32.94:357,33,0	1/1:5,3:7:21:223,21,0	1/1:0,14:14:39.02:422,39,0	1/1:5,6:10:30:334,30,0	0/0:20,0:19:41.98:0,42,490	0/0:12,0:12:35.67:0,36,332	1/1:0,11:11:26.76:281,27,0	0/0:5,0:5:10.55:0,11,88	1/1:0,3:3:5.98:61,6,0	0/0:9,0:9:24.03:0,24,252	0/0:11,0:11:27.51:0,28,294	0/0:27,0:27:56.56:0,57,629	0/0:21,0:21:47.17:0,47,536	1/1:0,13:13:38.94:388,39,0	1/1:0,9:8:20.97:217,21,0	1/1:2,2:4:9.91:111,10,0	0/0:4,0:4:12:0,12,121	1/1:0,2:2:3.48:41,3,0	1/1:1,5:6:15.05:194,15,0	0/0:16,0:16:39.41:0,39,422	1/1:6,7:13:8.67:311,9,0	1/1:1,7:8:20.96:226,21,0	1/1:0,6:6:12.04:160,12,0
chr10	90909321	.	GT	G	806.32	PASS	AB=0.940;AC=30;AF=0.536;AN=56;BaseQRankSum=9.686;DP=330;FS=4.700;HRun=12;HaplotypeScore=66.8213;InbreedingCoeff=0.4436;MQ=71.38;MQ0=0;MQRankSum=-3.057;QD=4.11;ReadPosRankSum=1.789;VQSLOD=0.8674;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:32:51.86:0,52,683	0/0:5,0:5:11.99:0,12,113	0/1:17,1:9:14.95:15,0,62	0/1:13,2:14:14.61:15,0,75	0/1:9,1:10:15.65:53,0,16	1/1:12,0:12:20.52:135,21,0	1/1:9,0:8:8.63:49,9,0	1/1:14,0:14:16.97:86,17,0	1/1:11,0:10:17.26:98,17,0	0/0:21,0:20:42.06:0,42,414	0/0:11,0:11:21.04:0,21,213	1/1:11,0:11:9.12:61,9,0	0/0:5,0:5:6:0,6,54	1/1:3,0:3:2.75:13,3,0	0/0:9,1:10:15.03:0,15,152	0/0:10,1:11:0.81:0,1,190	0/1:24,3:27:3.66:4,0,493	0/0:17,1:18:24.80:0,25,415	1/1:15,0:15:14.34:85,14,0	1/1:10,0:9:11.28:66,11,0	0/1:4,0:4:19.67:20,0,21	0/0:4,0:4:6.01:0,6,61	1/1:2,0:2:2.54:19,3,0	1/1:6,0:6:14.22:74,14,0	0/0:16,0:16:42.01:0,42,404	0/1:14,0:14:27.61:71,0,28	1/1:8,0:8:12.33:65,12,0	1/1:7,0:7:11.69:72,12,0
chr10	90909360	.	A	AAGT	1302.26	PASS	AB=0.678;AC=14;AF=0.304;AN=46;BaseQRankSum=8.116;DP=268;FS=62.508;HRun=0;HaplotypeScore=45.9780;InbreedingCoeff=0.3987;MQ=38.65;MQ0=6;MQRankSum=-5.557;QD=18.87;ReadPosRankSum=0.614;VQSLOD=1.0496;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:48.15:0,48,817	0/0:3,0:2:6.02:0,6,106	0/0:32,0:14:30.10:0,30,448	0/0:26,0:9:14.88:0,15,216	1/1:0,3:3:8.06:97,8,0	1/1:3,9:11:6.46:349,6,0	0/0:2,0:1:2.68:0,3,11	0/1:9,7:8:52.28:57,0,52	1/1:1,2:2:6.02:92,6,0	0/0:19,0:15:45.15:0,45,793	0/0:9,0:8:12.04:0,12,211	./.	0/0:4,0:3:3.01:0,3,53	./.	0/0:7,0:4:6.02:0,6,106	0/0:8,0:4:9.03:0,9,159	0/0:22,0:20:30.08:0,30,497	0/0:17,0:14:21.07:0,21,370	1/1:5,2:6:10.86:148,11,0	1/1:1,4:5:12.04:183,12,0	./.	0/0:4,0:1:2.97:0,3,20	./.	./.	0/0:14,0:11:23.87:0,24,382	0/1:6,4:10:9.02:229,0,9	0/1:3,3:6:24.47:127,0,24	0/1:3,4:7:14.85:174,0,15
chr10	90909362	.	C	CATAAG	2447.35	PASS	AB=0.605;AC=17;AF=0.354;AN=48;BaseQRankSum=6.940;DP=267;FS=79.799;HRun=0;HaplotypeScore=51.3964;InbreedingCoeff=0.3633;MQ=38.53;MQ0=7;MQRankSum=-6.472;QD=35.47;ReadPosRankSum=0.164;VQSLOD=0.5801;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:24:48.14:0,48,1070	0/0:3,0:2:6.02:0,6,139	0/0:31,0:15:29.24:0,29,544	0/0:27,0:10:17.78:0,18,274	0/1:0,3:3:8.88:139,0,9	1/1:3,9:11:13.97:602,14,0	1/1:2,0:1:3.01:34,3,0	0/1:7,7:6:21.61:109,0,22	1/1:1,2:2:6.02:149,6,0	0/0:19,0:15:45.15:0,45,1022	0/0:9,0:8:12.04:0,12,279	./.	0/0:4,0:3:3.01:0,3,70	1/1:1,1:1:1.82:5,2,0	0/0:7,0:4:6.02:0,6,139	0/0:8,0:4:9.03:0,9,210	0/0:23,0:20:27.09:0,27,627	0/0:17,0:14:21.07:0,21,488	1/1:5,2:6:1.73:281,2,0	0/1:1,4:5:0.99:283,0,1	./.	0/0:4,0:1:2.80:0,3,13	./.	./.	0/0:14,0:11:24.04:0,24,507	0/1:4,4:8:56.29:371,0,56	1/1:3,3:6:14.88:262,15,0	0/1:3,4:7:22.52:366,0,23
chr10	90909614	.	TTCTTCCTCCTCC	T	711.93	PASS	AB=0.833;AC=15;AF=0.357;AN=42;BaseQRankSum=1.372;DP=184;FS=10.754;HRun=0;HaplotypeScore=92.5720;InbreedingCoeff=0.6201;MQ=78.32;MQ0=2;MQRankSum=-2.190;QD=29.66;ReadPosRankSum=-1.224;VQSLOD=1.3428;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:42.14:0,42,2463	0/0:5,0:5:15.05:0,15,808	0/0:24,0:17:31.68:0,32,670	0/0:28,0:24:51.86:0,52,1739	./.	1/1:0,1:1:3.01:110,3,0	1/1:1,1:2:3.01:103,3,0	1/1:9,0:9:5.98:48,6,0	./.	0/0:7,0:7:21.07:0,21,944	0/0:16,0:16:42.60:0,43,1836	1/1:0,1:1:3.01:110,3,0	0/0:3,0:3:9.03:0,9,366	1/1:0,1:1:3.01:110,3,0	0/0:12,0:11:30.10:0,30,1690	0/0:2,0:2:6.02:0,6,239	0/0:17,0:17:42.14:0,42,2488	0/0:9,0:9:27.09:0,27,1265	./.	./.	./.	0/0:9,0:9:27.05:0,27,1217	./.	./.	0/0:6,0:6:15.05:0,15,785	0/1:4,1:5:99:135,0,146	1/1:0,4:4:6.02:219,6,0	1/1:1,0:1:2.97:20,3,0
chr10	90909617	.	T	TTCC	2722.40	PASS	AB=0.944;AC=19;AF=0.475;AN=40;BaseQRankSum=-2.111;DP=185;FS=0.000;HRun=0;HaplotypeScore=51.2660;InbreedingCoeff=0.5494;MQ=78.05;MQ0=2;MQRankSum=-1.914;QD=40.04;ReadPosRankSum=0.862;VQSLOD=4.2279;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:42.14:0,42,623	0/0:5,0:5:14.98:0,15,198	0/0:24,0:17:10.36:0,10,164	0/0:30,0:26:32.58:0,33,439	./.	0/1:2,0:2:8.84:9,0,15	0/0:2,0:2:2.98:0,3,21	./.	./.	1/1:0,7:7:21.07:415,21,0	1/1:3,11:15:31.56:737,32,0	0/0:1,0:1:2.98:0,3,21	1/1:1,2:3:9.03:165,9,0	0/0:1,0:1:2.98:0,3,21	0/0:12,0:11:29.46:0,29,414	1/1:0,2:2:6.02:120,6,0	0/0:19,0:19:48.11:0,48,675	1/1:2,7:9:27.09:534,27,0	1/1:4,0:4:4.17:21,4,0	./.	./.	1/1:2,7:9:27.04:498,27,0	./.	./.	1/1:1,6:7:15.05:315,15,0	0/1:4,1:5:14.98:57,0,15	0/1:5,0:5:10.97:11,0,33	./.
chr10	90909653	.	GT	G	165.25	PASS	AB=0.833;AC=14;AF=0.333;AN=42;BaseQRankSum=5.481;DP=223;FS=30.676;HRun=3;HaplotypeScore=71.1680;InbreedingCoeff=0.6166;MQ=76.21;MQ0=5;MQRankSum=-3.133;QD=10.33;ReadPosRankSum=1.116;VQSLOD=0.0723;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:60.20:0,60,863	0/0:8,0:8:18.06:0,18,244	0/0:32,1:12:22.68:0,23,268	0/0:39,0:27:17.17:0,17,390	./.	1/1:0,3:3:9.02:95,9,0	1/1:1,0:1:2.92:17,3,0	./.	./.	0/0:5,0:5:15.04:0,15,198	0/0:16,0:16:48.16:0,48,688	1/1:0,2:2:6.01:57,6,0	0/0:6,0:6:18.06:0,18,258	1/1:0,2:2:6.01:56,6,0	0/0:12,0:12:30.10:0,30,415	0/0:2,0:2:6.02:0,6,86	0/0:26,0:26:66.18:0,66,905	0/0:13,0:13:33.11:0,33,470	./.	0/1:1,1:2:14.01:22,0,14	./.	0/0:10,0:10:27.09:0,27,369	1/1:0,1:1:3:28,3,0	./.	0/0:7,0:7:18.06:0,18,259	0/1:2,0:2:1.28:1,0,38	1/1:2,1:3:3.01:30,3,0	./.
chr10	90909662	.	TGG	T	168.58	PASS	AB=0.756;AC=13;AF=0.310;AN=42;BaseQRankSum=6.032;DP=214;FS=12.957;HRun=2;HaplotypeScore=63.7941;InbreedingCoeff=0.4861;MQ=72.18;MQ0=6;MQRankSum=-1.801;QD=12.04;ReadPosRankSum=0.415;VQSLOD=-0.7208;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:54.17:0,54,960	0/0:8,0:8:21.05:0,21,331	0/0:37,0:10:1.05:0,1,141	0/0:36,0:18:11.12:0,11,295	./.	0/1:1,2:3:22.02:55,0,22	1/1:1,0:1:2.97:20,3,0	./.	./.	0/0:4,0:4:12.02:0,12,135	0/0:14,0:14:42.08:0,42,461	1/1:0,2:2:6.02:65,6,0	0/0:6,0:6:18.01:0,18,187	1/1:0,2:2:6.02:65,6,0	0/0:10,0:10:24.07:0,24,396	0/0:1,0:1:3.01:0,3,32	0/0:28,0:28:72.16:0,72,1253	0/0:13,0:12:30.04:0,30,352	./.	0/1:1,1:2:1.89:27,0,2	./.	0/0:6,0:6:18.05:0,18,221	1/1:0,1:1:3.01:33,3,0	./.	0/0:6,0:6:18.05:0,18,213	0/1:2,0:2:0.85:1,0,27	1/1:0,1:1:3.01:34,3,0	./.
chr10	90909664	.	G	GT	1019.08	PASS	AB=1.000;AC=30;AF=0.714;AN=42;BaseQRankSum=4.201;DP=221;FS=3.997;HRun=8;HaplotypeScore=57.6937;InbreedingCoeff=0.4596;MQ=70.79;MQ0=6;MQRankSum=-3.783;QD=7.03;ReadPosRankSum=1.920;VQSLOD=0.5444;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:47.89:0,48,427	0/0:7,0:7:18.01:0,18,165	0/1:39,0:11:7.87:8,0,69	0/1:40,0:18:17.56:18,0,43	./.	0/0:3,0:3:0.32:0,0,22	1/1:2,0:2:0.47:1,0,0	./.	./.	1/1:1,2:3:6.02:69,6,0	1/1:3,10:13:5.63:315,6,0	1/1:2,0:2:1.77:4,2,0	1/1:1,4:5:12.04:138,12,0	1/1:2,0:2:1.77:3,2,0	0/0:9,0:9:18.01:0,18,165	1/1:0,1:1:3.01:35,3,0	0/0:28,0:28:60.02:0,60,544	1/1:7,7:13:21.06:242,21,0	./.	1/1:3,0:4:6.73:43,7,0	./.	1/1:2,4:6:9.03:104,9,0	1/1:1,0:1:0.89:2,1,0	./.	1/1:2,4:6:12.04:138,12,0	1/1:1,1:2:3.01:34,3,0	1/1:1,0:1:1.55:4,2,0	./.
chr10	90909811	.	TAC	T	1583.63	PASS	AB=0.973;AC=24;AF=0.923;AN=26;BaseQRankSum=-3.920;DP=200;FS=9.291;HRun=0;HaplotypeScore=42.8662;InbreedingCoeff=-0.0585;MQ=69.69;MQ0=23;MQRankSum=-1.808;QD=8.38;ReadPosRankSum=3.708;VQSLOD=1.6649;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,4:18:45.65:444,46,0	1/1:0,1:1:3.01:41,3,0	0/1:51,2:12:18.29:18,0,191	0/1:58,0:14:18.62:19,0,43	./.	./.	./.	./.	./.	1/1:5,2:7:2.27:174,2,0	1/1:3,1:4:11.62:119,12,0	./.	1/1:4,0:4:11.21:105,11,0	./.	1/1:1,2:3:9.03:105,9,0	1/1:3,0:3:8.99:81,9,0	1/1:12,3:14:32.18:323,32,0	1/1:2,8:9:2.13:4,2,0	1/1:2,0:1:2.88:15,3,0	./.	./.	./.	./.	./.	1/1:8,1:8:20.24:225,20,0	./.	./.	./.
chr10	90909886	.	T	TTA	34.15	PASS	AB=0.750;AC=5;AF=0.093;AN=54;BaseQRankSum=1.942;DP=225;FS=5.233;HRun=0;HaplotypeScore=57.4018;InbreedingCoeff=0.3755;MQ=47.93;MQ0=5;MQRankSum=-2.729;QD=2.44;ReadPosRankSum=-1.796;VQSLOD=1.0362;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:48.16:0,48,783	0/0:3,0:3:9.01:0,9,122	0/0:2,0:1:3.01:0,3,49	./.	0/0:5,0:5:15.05:0,15,244	0/0:3,0:3:9.03:0,9,147	0/0:8,0:6:0.57:0,1,135	1/1:1,1:1:3.01:61,3,0	1/1:2,1:2:3.01:61,3,0	0/0:14,0:14:42.14:0,42,685	0/0:20,0:20:51.17:0,51,831	0/0:2,0:2:6.02:0,6,98	0/0:10,0:10:30.10:0,30,489	0/0:3,0:3:9.03:0,9,147	0/0:12,0:12:36.12:0,36,587	0/0:10,0:10:27.09:0,27,441	0/0:23,0:22:63.21:0,63,1022	0/0:12,0:12:27.09:0,27,440	0/0:6,0:3:9:0,9,119	0/0:4,0:4:12.04:0,12,186	0/0:6,1:7:14.21:0,14,243	0/0:10,0:10:30.10:0,30,489	0/0:7,0:7:15.05:0,15,244	0/1:6,3:9:15.07:15,0,272	0/0:9,0:9:27.09:0,27,440	0/0:6,0:6:18.06:0,18,293	0/0:7,0:7:21.07:0,21,342	0/0:4,0:4:12.04:0,12,196
chr10	90909911	.	C	CTT	3830.21	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=7.817;DP=255;FS=23.315;HRun=1;HaplotypeScore=47.9207;InbreedingCoeff=0.8578;MQ=65.64;MQ0=2;MQRankSum=-6.919;QD=47.29;ReadPosRankSum=3.667;VQSLOD=2.1885;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.27:0,81,1228	0/0:3,0:3:9.03:0,9,138	0/0:10,0:6:18.05:0,18,254	0/1:8,0:6:1.06:1,0,123	1/1:0,6:6:15.05:289,15,0	1/1:0,4:4:12.04:231,12,0	1/1:1,5:5:15.05:289,15,0	1/1:0,2:1:3.01:53,3,0	0/0:1,1:1:3.01:0,3,46	0/0:11,0:11:33.11:0,33,505	0/0:22,0:22:60.20:0,60,918	1/1:0,2:2:6.02:116,6,0	0/0:11,0:11:33.11:0,33,496	1/1:0,3:3:9.03:173,9,0	0/0:12,0:12:36.12:0,36,550	0/0:13,0:13:39.13:0,39,595	0/0:24,0:24:69.23:0,69,1056	0/0:14,0:14:36.12:0,36,545	1/1:1,5:4:12.04:225,12,0	1/1:1,5:6:18.03:311,18,0	1/1:0,5:5:15.05:290,15,0	0/0:12,0:12:36.12:0,36,551	1/1:0,10:10:27.09:521,27,0	1/1:0,6:6:18.06:347,18,0	0/0:10,0:10:30.10:0,30,445	1/1:0,6:6:18.06:347,18,0	1/1:0,7:7:21.07:405,21,0	1/1:0,4:4:12.04:232,12,0
chr10	90910356	.	T	TA	13960.09	PASS	AB=0.525;AC=29;AF=0.518;AN=56;BaseQRankSum=15.815;DP=672;FS=20.093;HRun=2;HaplotypeScore=94.1058;InbreedingCoeff=0.9161;MQ=90.80;MQ0=0;MQRankSum=-4.160;QD=38.04;ReadPosRankSum=2.496;VQSLOD=2.9736;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1361	0/0:10,0:10:27.08:0,27,334	0/0:32,0:32:84.23:0,84,1001	0/0:25,0:25:42.66:0,43,678	1/1:0,16:16:45.12:625,45,0	1/1:0,12:12:36.12:518,36,0	1/1:0,37:37:99:1425,99,0	1/1:5,26:31:78.24:1086,78,0	1/1:1,31:32:87.29:1252,87,0	0/0:25,0:25:75.23:0,75,919	0/0:15,0:15:42.12:0,42,511	1/1:1,28:29:78.26:1117,78,0	0/0:17,0:17:45.09:0,45,540	1/1:2,31:33:84.28:1202,84,0	0/0:36,0:36:99:0,99,1217	0/0:26,0:26:69.19:0,69,830	0/0:25,0:25:72.17:0,72,851	0/0:22,0:22:66.21:0,66,817	1/1:2,13:15:42.12:570,42,0	1/1:0,17:17:45.07:601,45,0	1/1:1,42:43:99:1685,117,0	0/0:15,0:15:39.11:0,39,471	1/1:0,16:16:48.16:691,48,0	1/1:0,27:27:66.22:950,66,0	0/0:18,0:18:54.17:0,54,669	0/1:3,29:32:15.28:1157,0,15	1/1:0,24:24:69.23:994,69,0	1/1:0,3:3:6.02:86,6,0
chr10	90910459	.	TG	T	1392.36	PASS	AB=0.890;AC=36;AF=0.643;AN=56;BaseQRankSum=1.759;DP=395;FS=8.342;HRun=12;HaplotypeScore=59.5619;InbreedingCoeff=0.0739;MQ=80.98;MQ0=1;MQRankSum=-0.064;QD=3.94;ReadPosRankSum=6.402;VQSLOD=-0.3333;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:17,3:20:14.03:14,0,192	0/0:4,0:4:2.99:0,3,24	0/1:16,0:17:27.30:27,0,38	0/1:13,0:11:2.43:2,0,42	0/0:8,0:8:11.82:0,12,105	0/1:7,2:9:32.79:35,0,33	0/1:26,6:32:74.82:75,0,339	0/1:28,1:29:1.56:2,0,128	0/1:15,2:17:19.71:20,0,127	1/1:7,1:8:5.96:45,6,0	1/1:2,6:8:8.94:70,9,0	0/0:12,0:13:9.18:0,9,77	1/1:3,0:13:16.29:47,16,0	0/0:16,1:17:7.64:0,8,61	0/1:12,1:13:3.70:4,0,104	1/1:5,3:9:12.69:79,13,0	0/1:21,3:25:91.12:91,0,232	1/1:14,12:26:33.65:236,34,0	1/1:9,4:13:16.18:119,16,0	1/1:1,2:5:7.04:35,7,0	1/1:18,6:26:21.81:142,22,0	1/1:6,4:12:24.97:173,25,0	0/1:3,2:5:15.19:15,0,29	0/1:11,1:12:19.26:19,0,159	1/1:7,3:12:10.40:104,10,0	1/1:5,5:10:10.33:60,10,0	1/1:6,5:11:17.89:137,18,0	0/1:4,1:5:15.14:15,0,72
chr10	90910564	.	G	GTCTC	2457.72	PASS	AB=0.946;AC=36;AF=0.720;AN=50;BaseQRankSum=2.600;DP=510;FS=8.675;HRun=0;HaplotypeScore=101.1276;InbreedingCoeff=0.3873;MQ=68.72;MQ0=8;MQRankSum=-0.873;QD=7.23;ReadPosRankSum=-1.712;VQSLOD=1.3038;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:27.09:0,27,376	0/0:11,0:11:6.02:0,6,81	./.	0/0:37,0:24:3.01:0,3,44	./.	1/1:24,0:24:16.93:264,17,0	0/1:27,0:27:24.11:229,0,24	1/1:32,0:32:21.56:171,22,0	1/1:13,0:12:9.03:149,9,0	1/1:16,0:16:33.07:481,33,0	1/1:10,0:10:2.98:22,3,0	1/1:18,0:18:13.81:211,14,0	1/1:10,0:9:6.02:108,6,0	1/1:16,0:14:8.98:106,9,0	0/0:13,0:13:24.07:0,24,348	1/1:14,0:15:6.02:89,6,0	0/0:21,0:21:39.13:0,39,576	1/1:14,0:14:9.01:115,9,0	0/1:16,0:16:4.89:5,0,19	1/1:20,0:20:0.47:2,0,0	0/1:13,5:18:39.57:65,0,40	./.	1/1:8,0:7:6.02:100,6,0	1/1:19,0:19:9.03:130,9,0	1/1:12,0:12:3.01:50,3,0	0/1:27,0:23:62.91:223,0,63	1/1:13,0:13:5.88:96,6,0	1/1:8,0:5:0.47:1,0,0
chr10	90910596	.	C	CTGTGTGTG	1912.30	PASS	AB=0.997;AC=18;AF=0.321;AN=56;BaseQRankSum=4.392;DP=415;FS=35.358;HRun=0;HaplotypeScore=109.8702;InbreedingCoeff=-0.1132;MQ=42.61;MQ0=19;MQRankSum=-0.934;QD=8.42;ReadPosRankSum=-1.349;VQSLOD=0.5853;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:26:49.49:0,49,1042	0/1:6,0:6:11.79:12,0,126	0/0:2,0:1:3.01:0,3,37	0/0:10,0:2:6.01:0,6,69	1/1:18,0:18:8.77:193,9,0	0/0:17,2:19:23.80:0,24,338	0/0:26,0:26:7.10:0,7,366	0/1:26,0:23:73.42:73,0,407	0/1:18,0:17:56.60:57,0,126	0/1:22,0:22:99:419,0,288	0/0:8,0:8:2.99:0,3,24	0/1:19,0:19:99:100,0,204	1/1:7,0:5:12.04:239,12,0	0/1:19,0:17:35.40:35,0,104	0/0:14,0:14:27.09:0,27,619	1/1:9,0:7:3.91:22,4,0	0/0:23,0:23:63.16:0,63,1244	0/1:12,0:11:39.93:174,0,40	0/1:13,0:11:99:144,0,120	0/0:11,0:10:6.75:0,7,66	0/1:12,0:11:60.27:60,0,68	0/0:11,0:10:5.64:0,6,39	0/1:13,0:12:60.64:74,0,61	0/0:17,0:15:12.02:0,12,153	0/0:11,0:10:0:0,0,0	0/1:22,1:19:99:400,0,283	0/1:10,0:10:70.45:70,0,167	0/0:6,0:4:8.97:0,9,93
chr10	90910598	.	C	CTGTGTGTGTG	3604.18	PASS	AB=0.917;AC=33;AF=0.688;AN=48;BaseQRankSum=1.491;DP=428;FS=0.971;HRun=0;HaplotypeScore=119.5314;InbreedingCoeff=0.5364;MQ=42.67;MQ0=19;MQRankSum=-3.174;QD=12.09;ReadPosRankSum=-1.828;VQSLOD=2.2714;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:28:27.09:0,27,785	0/0:7,0:7:6.01:0,6,114	0/0:2,0:1:3.01:0,3,49	./.	1/1:18,0:18:9.03:258,9,0	1/1:19,0:19:5.94:42,6,0	1/1:28,0:28:3.47:48,3,0	1/1:27,0:24:18.06:301,18,0	1/1:10,1:20:3.01:87,3,0	0/1:24,0:24:32.60:688,0,33	./.	1/1:19,0:19:9.01:193,9,0	1/1:6,0:5:12.04:298,12,0	1/1:20,0:18:6.41:143,6,0	0/0:14,0:14:15.05:0,15,381	1/1:8,1:7:6:62,6,0	0/0:25,0:25:30.10:0,30,797	1/1:11,0:11:17.97:305,18,0	1/1:13,0:11:14.32:257,14,0	0/1:8,0:11:0:0,0,0	1/1:12,0:11:6.46:115,6,0	0/1:10,0:9:0:0,0,0	1/1:13,0:12:3.01:107,3,0	0/0:13,2:14:0:0,0,0	./.	1/1:21,1:18:18.53:577,19,0	1/1:11,0:11:6.02:125,6,0	./.
chr10	90911053	.	A	ATGTGTG	761.65	PASS	AB=1.000;AC=14;AF=0.368;AN=38;BaseQRankSum=2.788;DP=179;FS=0.000;HRun=0;HaplotypeScore=50.9459;InbreedingCoeff=0.5468;MQ=56.04;MQ0=0;MQRankSum=-4.115;QD=11.90;ReadPosRankSum=-2.044;VQSLOD=0.8908;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:12.03:0,12,200	0/0:4,0:4:3.01:0,3,34	0/0:8,0:8:12.02:0,12,189	0/0:3,0:3:6.02:0,6,132	./.	0/1:4,0:4:0:0,0,0	1/1:6,0:6:3.01:48,3,0	0/1:19,0:18:34.14:339,0,34	./.	0/0:5,0:5:12.04:0,12,191	0/0:6,0:6:15.05:0,15,282	./.	./.	./.	0/0:4,0:4:6.01:0,6,85	./.	0/0:18,0:18:44.49:0,44,795	0/0:9,0:9:14.74:0,15,160	1/1:7,0:7:8.98:99,9,0	./.	1/1:9,0:9:7.56:105,8,0	0/0:4,0:4:6.01:0,6,81	./.	./.	0/0:2,0:2:5.98:0,6,76	1/1:8,0:8:8.86:108,9,0	1/1:2,0:3:3.01:94,3,0	1/1:3,4:8:4.57:104,5,0
chr10	90911695	.	TAAAAA	T	6933.82	PASS	AB=0.579;AC=29;AF=0.518;AN=56;BaseQRankSum=1.539;DP=518;FS=2.805;HRun=17;HaplotypeScore=112.0838;InbreedingCoeff=0.9454;MQ=74.29;MQ0=1;MQRankSum=-7.843;QD=28.77;ReadPosRankSum=4.093;VQSLOD=4.0098;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:51:99:0,138,2834	0/0:3,0:4:12.04:0,12,263	0/0:33,0:15:17.29:0,17,288	0/0:29,0:18:18.97:0,19,245	1/1:4,14:18:39:576,39,0	1/1:0,14:17:44.63:609,45,0	1/1:5,11:17:30.05:418,30,0	1/1:4,18:23:50.87:677,51,0	1/1:3,7:11:17.80:255,18,0	0/0:8,0:12:26.76:0,27,489	0/0:11,0:16:32.75:0,33,499	0/1:3,6:11:1.68:208,0,2	0/0:12,0:17:41.79:0,42,674	1/1:5,9:15:26.97:390,27,0	0/0:11,0:13:33.11:0,33,705	0/0:6,0:12:29.77:0,30,443	0/0:25,0:36:90.28:0,90,1917	0/0:7,0:24:53.63:0,54,891	1/1:4,13:20:47.48:649,47,0	1/1:2,9:12:31.90:436,32,0	1/1:4,10:14:19.03:313,19,0	0/0:6,0:13:27.03:0,27,351	1/1:2,11:16:26.61:345,27,0	1/1:1,26:28:53.64:797,54,0	0/0:5,0:13:27.08:0,27,406	1/1:2,18:20:50.88:690,51,0	1/1:3,9:12:23.96:361,24,0	1/1:2,4:7:14.98:210,15,0
chr10	90912697	.	G	GGT	5880.57	PASS	AB=0.998;AC=32;AF=0.571;AN=56;BaseQRankSum=1.082;DP=696;FS=0.000;HRun=0;HaplotypeScore=207.1257;InbreedingCoeff=0.2649;MQ=53.17;MQ0=11;MQRankSum=-2.620;QD=11.14;ReadPosRankSum=0.134;VQSLOD=4.3770;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,108,1308	0/0:8,0:10:20.56:0,21,187	0/1:31,0:12:14.86:15,0,132	0/0:34,0:16:24.49:0,24,239	0/1:23,0:23:0.04:0,0,0	0/1:23,0:23:8.40:8,0,22	0/1:27,0:26:7.89:19,0,8	1/1:23,0:21:3.66:28,4,0	0/0:21,0:21:2.06:0,2,26	1/1:25,17:41:50.90:1253,51,0	1/1:6,12:18:30.96:527,31,0	0/1:23,0:24:9.34:9,0,18	1/1:10,19:29:30.66:928,31,0	0/0:19,0:19:2.20:0,2,16	0/1:14,0:14:6.60:7,0,364	1/1:6,13:20:57.16:855,57,0	0/0:39,0:40:99:0,99,1160	1/1:9,8:17:38.70:542,39,0	0/1:19,0:18:2.61:16,0,3	1/1:21,0:20:0.56:25,1,0	1/1:32,0:31:6.83:52,7,0	1/1:11,18:30:60.19:929,60,0	0/1:27,0:27:0.31:0,0,3	0/1:22,0:22:0:0,0,0	1/1:8,8:16:33.10:504,33,0	0/1:34,1:35:7.43:121,0,7	0/1:19,0:19:1.70:34,0,2	0/1:14,0:14:6.16:6,0,28
chr10	90912726	.	GCATA	G	2742.94	PASS	AB=0.731;AC=22;AF=0.393;AN=56;BaseQRankSum=11.335;DP=754;FS=1.475;HRun=0;HaplotypeScore=222.2830;InbreedingCoeff=0.6593;MQ=41.55;MQ0=21;MQRankSum=-9.654;QD=10.16;ReadPosRankSum=0.930;VQSLOD=3.2478;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,1:50:99:0,141,3649	0/0:10,0:10:30.10:0,30,806	0/0:65,0:9:24.05:0,24,575	0/0:57,0:15:43.59:0,44,717	0/0:12,7:21:0.47:0,0,1	1/1:10,9:23:23.76:244,24,0	1/1:13,11:25:11.58:137,12,0	0/1:11,3:9:99:165,0,144	1/1:4,7:12:9.03:159,9,0	0/0:42,1:41:99:0,107,1737	0/0:18,0:18:35.71:0,36,741	1/1:10,12:23:17.90:240,18,0	0/0:29,0:28:66.20:0,66,1045	1/1:11,9:20:16.75:197,17,0	0/0:15,0:15:45.15:0,45,1221	0/0:30,0:31:85.88:0,86,1391	0/0:44,0:44:99:0,129,3423	0/0:23,0:22:37.95:0,38,875	0/1:8,3:10:96.27:232,0,96	1/1:9,11:20:2.81:18,3,0	1/1:27,7:35:2.39:24,2,0	0/0:31,0:31:50.34:0,50,944	0/1:14,10:26:0.37:0,0,0	0/0:16,10:27:0.28:0,0,1	0/0:20,0:20:44.87:0,45,589	0/1:18,17:36:2.68:900,0,3	1/1:4,6:11:20.03:282,20,0	1/1:0,9:11:23.79:335,24,0
chr10	90912730	.	ATG	A	3914.73	PASS	AB=0.997;AC=23;AF=0.411;AN=56;BaseQRankSum=4.705;DP=798;FS=3.899;HRun=0;HaplotypeScore=209.8786;InbreedingCoeff=0.5009;MQ=43.07;MQ0=20;MQRankSum=0.389;QD=9.34;ReadPosRankSum=0.834;VQSLOD=3.5071;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,3:49:42.43:0,42,1596	0/0:11,0:11:30.05:0,30,417	0/0:68,0:12:30.01:0,30,357	0/0:53,0:13:18.17:0,18,275	0/0:23,0:23:0.47:0,0,1	0/0:26,0:26:1.78:0,2,88	0/1:28,0:27:5.16:5,0,27	0/1:20,0:15:4.87:5,0,10	1/1:13,0:13:3.62:10,4,0	1/1:14,30:44:93.05:1045,93,0	1/1:8,11:19:14.78:149,15,0	0/1:25,0:25:4.68:5,0,43	1/1:10,18:28:45.10:522,45,0	0/1:25,0:25:7.21:7,0,30	0/0:16,0:16:42.13:0,42,648	1/1:8,22:30:63.14:728,63,0	0/0:43,2:45:75.38:0,75,1601	1/1:8,17:24:38.98:446,39,0	0/0:15,0:14:7.21:0,7,61	0/0:22,0:21:2.77:0,3,14	0/1:36,0:36:0:0,0,0	1/1:11,23:34:42.09:485,42,0	0/0:29,0:29:1.94:0,2,6	0/1:31,0:31:0.03:0,0,1	1/1:1,14:19:44.54:440,45,0	0/1:40,1:41:68.81:69,0,212	0/0:11,0:11:5.95:0,6,54	0/0:11,0:11:13.31:0,13,92
chr10	90912740	.	GTGTGTGTGTGTT	G	3065.16	PASS	AB=0.734;AC=13;AF=0.232;AN=56;BaseQRankSum=3.167;DP=781;FS=7.183;HRun=0;HaplotypeScore=292.1241;InbreedingCoeff=0.0994;MQ=45.41;MQ0=16;MQRankSum=-2.310;QD=12.21;ReadPosRankSum=0.511;VQSLOD=1.4202;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,124,6643	0/0:11,0:11:33.11:0,33,1510	0/0:64,0:16:45.11:0,45,1556	0/0:49,0:15:42.10:0,42,1367	0/0:6,17:25:0.47:0,0,1	0/1:12,11:27:56.05:56,0,196	0/1:10,17:30:91.26:157,0,91	1/1:4,15:16:19.28:561,19,0	1/1:9,4:14:4.71:215,5,0	0/0:42,0:43:99:0,117,3940	0/0:17,0:17:42.35:0,42,756	0/1:12,10:24:95.76:174,0,96	0/0:27,0:27:63.17:0,63,1972	0/1:8,16:26:84.48:88,0,84	0/0:16,0:16:48.15:0,48,2472	0/0:28,0:28:72.22:0,72,2563	0/0:43,0:43:99:0,123,6429	0/0:26,0:25:54.17:0,54,1876	0/1:8,5:13:99:248,0,154	0/0:12,7:20:2.62:0,3,52	0/1:14,23:37:0:0,0,1	0/0:32,0:32:71.78:0,72,1806	0/0:18,10:28:2.78:0,3,8	0/0:10,18:31:2.46:0,2,6	0/0:21,0:21:56.40:0,56,1807	0/1:19,19:40:99:1526,0,435	0/1:8,1:9:35.96:36,0,123	0/1:10,0:11:99:155,0,242
chr10	90912742	.	G	GCATA	2958.55	PASS	AB=0.899;AC=26;AF=0.464;AN=56;BaseQRankSum=10.737;DP=762;FS=2.195;HRun=0;HaplotypeScore=219.6308;InbreedingCoeff=0.6518;MQ=47.89;MQ0=16;MQRankSum=-6.804;QD=8.81;ReadPosRankSum=1.800;VQSLOD=3.1324;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,2540	0/0:11,0:11:33.11:0,33,657	0/0:62,0:17:45.14:0,45,874	0/0:50,0:16:42.14:0,42,797	1/1:22,0:24:0.47:1,0,0	1/1:20,6:27:20.73:288,21,0	1/1:22,7:29:11.58:181,12,0	0/1:19,0:16:23.38:275,0,23	1/1:8,4:12:5.95:124,6,0	0/0:44,0:45:99:0,120,1646	0/0:16,0:16:26.46:0,26,365	1/1:16,6:22:11.85:192,12,0	0/0:26,0:26:60.31:0,60,892	1/1:21,2:24:9.02:113,9,0	0/0:19,0:19:48.15:0,48,965	0/0:27,0:27:72.22:0,72,930	0/0:44,0:44:99:0,129,2572	0/0:26,0:25:57.18:0,57,825	0/1:13,1:13:76.07:276,0,76	1/1:11,6:17:2.63:59,3,0	1/1:29,4:35:0.12:0,0,0	0/0:31,0:31:51.13:0,51,631	0/1:17,8:25:0.46:1,0,0	0/1:26,3:29:0.21:1,0,0	0/0:23,0:23:60.16:0,60,784	1/1:27,11:38:6.18:1240,6,0	1/1:9,0:10:3.64:152,4,0	1/1:9,2:11:16.47:237,16,0
chr10	90913405	.	C	CT	12413.32	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=17.584;DP=639;FS=1.293;HRun=1;HaplotypeScore=107.6244;InbreedingCoeff=0.9972;MQ=84.60;MQ0=0;MQRankSum=-7.361;QD=37.85;ReadPosRankSum=-0.461;VQSLOD=4.5817;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,172,2207	0/0:7,0:7:21.07:0,21,272	0/0:21,0:21:53.85:0,54,686	0/0:22,0:22:66.21:0,66,834	1/1:2,29:31:75.20:1076,75,0	1/1:2,14:16:42.13:608,42,0	1/1:6,27:33:90.11:1197,90,0	1/1:0,20:20:60.19:876,60,0	1/1:2,13:15:39.05:537,39,0	0/0:29,0:29:84.21:0,84,1067	0/0:22,0:22:66.20:0,66,840	1/1:1,21:22:66.17:956,66,0	0/0:15,0:15:42.11:0,42,528	1/1:3,15:18:51.10:716,51,0	0/0:21,0:20:57.18:0,57,739	0/0:14,0:14:42.14:0,42,544	0/0:33,0:33:90.24:0,90,1135	0/0:24,0:24:66.21:0,66,855	1/1:3,16:19:57.18:826,57,0	1/1:1,20:21:51.04:689,51,0	1/1:7,25:32:87.06:1116,87,0	0/0:26,0:26:78.23:0,78,982	1/1:4,19:23:60.12:845,60,0	1/1:6,21:27:69.11:929,69,0	0/0:20,0:20:57.15:0,57,698	1/1:5,16:21:57.19:853,57,0	1/1:2,20:22:66.21:967,66,0	1/1:3,5:8:15.05:225,15,0
chr10	90913458	.	GT	G	10491.01	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=15.590;DP=616;FS=2.547;HRun=2;HaplotypeScore=83.4177;InbreedingCoeff=0.9972;MQ=85.14;MQ0=0;MQRankSum=-6.269;QD=34.74;ReadPosRankSum=-0.425;VQSLOD=4.8698;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,156,2223	0/0:7,0:7:21.07:0,21,309	0/0:25,0:25:54.21:0,54,865	0/0:16,0:16:39.12:0,39,531	1/1:4,16:20:47.72:594,48,0	1/1:2,15:17:45.15:581,45,0	1/1:2,31:33:90.29:1165,90,0	1/1:0,21:21:63.16:774,63,0	1/1:0,15:15:45.15:582,45,0	0/0:31,0:30:90.28:0,90,1284	0/0:22,0:22:63.66:0,64,889	1/1:1,20:21:57.03:695,57,0	0/0:17,0:17:48.13:0,48,671	1/1:0,16:16:48.16:622,48,0	0/0:22,0:21:66.21:0,66,956	0/0:19,0:19:54.17:0,54,781	0/0:33,0:33:96.31:0,96,1395	0/0:23,0:23:66.15:0,66,930	1/1:1,16:17:51.14:632,51,0	1/1:0,29:29:84.27:1083,84,0	1/1:1,28:29:71.76:907,72,0	0/0:30,0:30:90.26:0,90,1278	1/1:1,15:16:45.13:568,45,0	1/1:0,30:30:75.09:921,75,0	0/0:16,0:16:48.16:0,48,706	1/1:0,17:17:51.17:658,51,0	1/1:1,15:16:42.14:543,42,0	1/1:2,3:5:15.02:165,15,0
chr10	90914912	.	AG	A	214.38	PASS	AB=0.786;AC=2;AF=0.036;AN=56;BaseQRankSum=6.160;DP=710;FS=1.081;HRun=1;HaplotypeScore=72.1535;InbreedingCoeff=-0.0382;MQ=76.59;MQ0=1;MQRankSum=4.167;QD=4.56;ReadPosRankSum=-1.924;VQSLOD=-0.3084;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,2154	0/0:15,0:15:45.13:0,45,676	0/1:18,8:23:99:195,0,527	0/1:15,4:20:99:108,0,568	0/0:20,0:20:57.18:0,57,885	0/0:32,0:32:93.30:0,93,1463	0/0:23,0:23:66.23:0,66,1055	0/0:31,0:31:87.30:0,87,1388	0/0:32,0:32:96.33:0,96,1530	0/0:24,0:24:69.24:0,69,1103	0/0:11,0:11:33.11:0,33,527	0/0:29,0:29:87.24:0,87,1294	0/0:30,0:30:87.27:0,87,1339	0/0:21,0:21:63.21:0,63,1007	0/0:33,0:33:99:0,99,1559	0/0:34,0:33:99:0,102,1601	0/0:23,0:23:69.22:0,69,1061	0/0:29,0:29:87.28:0,87,1366	0/0:24,0:24:72.24:0,72,1130	0/0:12,0:12:33.10:0,33,500	0/0:46,0:46:99:0,135,2037	0/0:33,0:33:93.30:0,93,1461	0/0:14,0:14:42.13:0,42,646	0/0:36,0:36:99:0,108,1722	0/0:20,0:20:60.20:0,60,957	0/0:23,0:23:69.24:0,69,1100	0/0:17,0:17:51.17:0,51,815	0/0:4,0:4:12.04:0,12,192
chr10	90915031	.	AC	A	4180.51	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=19.487;DP=729;FS=0.859;HRun=3;HaplotypeScore=125.1353;InbreedingCoeff=0.9984;MQ=63.98;MQ0=1;MQRankSum=-0.261;QD=10.37;ReadPosRankSum=-0.699;VQSLOD=1.1115;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:99:0,148,2350	0/0:19,0:19:57.19:0,57,909	0/0:10,0:6:17.95:0,18,251	0/0:18,0:10:23.27:0,23,299	1/1:15,1:16:33.18:120,33,0	1/1:18,0:18:43.38:179,43,0	1/1:30,0:30:75.87:337,76,0	1/1:38,1:39:99:543,106,0	1/1:34,0:34:74:368,74,0	0/0:29,0:29:87.28:0,87,1338	0/0:16,0:16:48.16:0,48,763	1/1:26,0:26:48.55:192,49,0	0/0:27,0:27:81.26:0,81,1271	1/1:31,0:31:53.67:264,54,0	0/0:32,0:32:96.33:0,96,1526	0/0:33,0:33:99:0,99,1555	0/0:30,0:30:90.24:0,90,1356	0/0:17,0:17:51.17:0,51,809	1/1:23,0:23:54.45:254,54,0	1/1:18,0:18:34.53:156,35,0	1/1:61,0:61:99:763,155,0	0/0:21,0:21:63.18:0,63,946	1/1:25,0:25:45.20:176,45,0	1/1:19,0:19:44.03:184,44,0	0/0:25,0:25:75.26:0,75,1199	1/1:29,1:30:72.35:368,72,0	1/1:19,1:20:43.28:142,43,0	1/1:13,0:13:29.35:136,29,0
chr10	90916705	.	G	GAAAAA	12450.91	PASS	AB=0.885;AC=30;AF=0.536;AN=56;BaseQRankSum=2.257;DP=604;FS=0.739;HRun=10;HaplotypeScore=130.8454;InbreedingCoeff=0.8696;MQ=69.65;MQ0=1;MQRankSum=-10.171;QD=34.68;ReadPosRankSum=-7.423;VQSLOD=0.9934;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,1563	0/0:7,0:7:17.25:0,17,248	0/0:19,0:18:35.57:0,36,489	0/0:19,0:18:35.10:0,35,482	1/1:13,9:31:61.65:1220,62,0	1/1:6,7:17:32.78:755,33,0	1/1:12,6:21:35.48:811,35,0	1/1:22,1:27:43.94:942,44,0	1/1:5,11:17:42.14:1033,42,0	0/0:24,0:25:68.69:0,69,1042	0/0:11,0:11:30.10:0,30,482	1/1:6,9:16:30.10:823,30,0	0/0:22,0:25:62.56:0,63,937	1/1:10,9:22:21.07:517,21,0	0/0:25,0:25:60.09:0,60,935	0/1:25,0:25:1.53:2,0,922	0/0:23,0:23:66.19:0,66,1038	0/0:21,0:22:50.54:0,51,781	1/1:18,6:31:50.78:1018,51,0	1/1:19,7:30:57.19:1301,57,0	1/1:10,7:21:39.13:859,39,0	0/0:16,0:16:32.97:0,33,531	1/1:6,6:16:30.09:559,30,0	1/1:8,10:22:33.42:809,33,0	0/0:16,0:16:36:0,36,554	0/1:21,5:30:86.10:963,0,86	1/1:11,7:23:29.74:672,30,0	1/1:2,7:9:6.02:167,6,0
chr10	90917145	.	CGT	C	3799.99	PASS	AB=0.822;AC=30;AF=0.536;AN=56;BaseQRankSum=1.982;DP=799;FS=5.199;HRun=0;HaplotypeScore=131.2899;InbreedingCoeff=0.5288;MQ=52.34;MQ0=23;MQRankSum=2.586;QD=7.69;ReadPosRankSum=4.353;VQSLOD=3.2037;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,4:40:57.71:58,0,398	0/0:8,0:8:3.01:0,3,45	0/0:50,0:18:6.46:0,6,69	0/0:57,0:26:3.01:0,3,44	1/1:21,7:28:8.67:99,9,0	1/1:13,8:25:27.82:244,28,0	1/1:21,16:40:47.62:473,48,0	1/1:28,1:28:8.34:56,8,0	1/1:11,13:27:38.77:392,39,0	0/0:26,0:30:23.65:0,24,347	0/0:11,0:19:10.83:0,11,48	1/1:18,14:35:34.90:341,35,0	0/0:16,0:16:10.57:0,11,81	1/1:13,10:25:24.78:249,25,0	0/1:29,1:31:22.84:23,0,517	0/0:21,0:31:17.07:0,17,145	0/0:26,0:27:5.54:0,6,450	0/0:17,0:23:14.64:0,15,170	1/1:9,2:12:6.02:67,6,0	0/1:8,13:21:9.84:237,0,10	1/1:44,18:63:41.77:420,42,0	0/0:14,0:20:6.99:0,7,27	1/1:12,5:18:11.87:114,12,0	1/1:16,17:37:53.40:521,53,0	0/0:10,0:17:3:0,3,26	0/1:21,6:27:18.73:212,0,19	1/1:13,7:20:26.74:261,27,0	1/1:10,1:11:3:33,3,0
chr10	90917259	.	A	ATAAC	21987.94	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-12.776;DP=631;FS=3.562;HRun=0;HaplotypeScore=96.0748;InbreedingCoeff=0.9998;MQ=88.50;MQ0=0;MQRankSum=-12.048;QD=64.48;ReadPosRankSum=0.572;VQSLOD=7.0052;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,126,2319	0/0:14,0:14:36.12:0,36,683	0/0:24,0:24:63.19:0,63,1065	0/0:31,0:31:75.22:0,75,1300	1/1:1,13:14:30.10:779,30,0	1/1:3,23:28:57.20:1535,57,0	1/1:4,14:19:39.13:1044,39,0	1/1:6,20:29:75.24:1885,75,0	1/1:4,16:20:51.17:1343,51,0	0/0:31,0:31:87.26:0,87,1532	0/0:14,0:14:33.11:0,33,625	1/1:2,20:23:60.21:1594,60,0	0/0:11,0:11:33.11:0,33,606	1/1:4,15:21:60.21:1569,60,0	0/0:16,0:16:42.13:0,42,763	0/0:13,0:13:36.12:0,36,683	0/0:32,0:32:93.29:0,93,1711	0/0:26,0:26:75.20:0,75,1384	1/1:4,16:20:54.19:1414,54,0	1/1:1,23:26:75.10:1871,75,0	1/1:4,29:32:75.26:1947,75,0	0/0:20,0:20:54.19:0,54,1018	1/1:2,16:18:48.16:1290,48,0	1/1:1,22:24:54.18:1454,54,0	0/0:11,0:11:33.10:0,33,595	1/1:2,18:22:57.18:1403,57,0	1/1:5,22:28:69.24:1810,69,0	1/1:0,13:14:39.13:1052,39,0
chr10	90918017	.	TC	T	11831.80	PASS	AB=0.532;AC=29;AF=0.518;AN=56;BaseQRankSum=11.087;DP=647;FS=4.307;HRun=4;HaplotypeScore=100.5848;InbreedingCoeff=0.9328;MQ=86.82;MQ0=0;MQRankSum=-4.625;QD=32.59;ReadPosRankSum=0.724;VQSLOD=4.8818;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,1842	0/0:10,0:10:30.09:0,30,396	0/0:22,0:22:63.20:0,63,861	0/0:27,0:27:80.58:0,81,1029	1/1:0,22:22:57.17:683,57,0	1/1:2,28:30:84.26:1007,84,0	1/1:3,21:24:63.19:756,63,0	1/1:1,29:30:87.24:1022,87,0	1/1:1,19:20:54.16:648,54,0	0/0:19,0:19:51.15:0,51,670	0/0:18,0:18:54.14:0,54,730	1/1:0,17:17:45.14:540,45,0	0/0:13,0:13:39.13:0,39,546	1/1:0,19:19:54.17:648,54,0	0/0:25,0:25:75.22:0,75,1016	0/0:18,0:18:54.18:0,54,756	0/0:31,0:31:93.26:0,93,1262	0/0:17,0:17:48.16:0,48,672	1/1:3,19:22:57.16:674,57,0	1/1:0,24:24:66.20:792,66,0	1/1:3,44:47:99:1512,126,0	0/0:21,0:21:63.19:0,63,849	1/1:0,24:24:66.20:792,66,0	1/1:1,18:19:54.17:648,54,0	0/0:16,0:16:48.16:0,48,671	0/1:3,22:25:11.85:708,0,12	1/1:0,18:18:51.16:612,51,0	1/1:0,22:22:66.20:792,66,0
chr10	90918325	.	TATCA	T	24909.54	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=14.052;DP=732;FS=2.832;HRun=0;HaplotypeScore=142.3776;InbreedingCoeff=0.9997;MQ=88.08;MQ0=2;MQRankSum=-9.703;QD=44.48;ReadPosRankSum=3.726;VQSLOD=5.6469;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,3157	0/0:12,0:12:36.12:0,36,971	0/0:38,0:38:99:0,102,2391	0/0:22,0:22:60.13:0,60,1455	1/1:0,28:28:72.18:1308,72,0	1/1:0,31:31:75.12:1344,75,0	1/1:0,22:22:54.19:1023,54,0	1/1:4,40:44:99:1993,117,0	1/1:1,25:26:48.16:911,48,0	1/1:0,39:39:99:2221,117,0	1/1:1,23:24:51.11:928,51,0	1/1:0,15:15:42.14:796,42,0	1/1:0,24:23:57.20:1078,57,0	1/1:0,23:23:63.22:1195,63,0	0/0:23,0:23:66.21:0,66,1690	1/1:1,32:32:90.31:1666,90,0	0/0:33,0:33:96.28:0,96,2565	1/1:1,22:23:54.18:1003,54,0	1/1:3,11:14:33.11:614,33,0	1/1:2,21:23:63.22:1170,63,0	1/1:6,30:36:87.11:1506,87,0	1/1:2,25:27:60.15:1099,60,0	1/1:3,17:20:33.11:587,33,0	1/1:1,29:30:54.01:1025,54,0	1/1:1,13:14:29.97:491,30,0	1/1:0,26:26:78.26:1435,78,0	1/1:1,23:24:48.06:834,48,0	1/1:2,12:14:36.12:683,36,0
chr10	90919432	.	T	TCATGTTAC	24248.15	PASS	AB=0.675;AC=29;AF=0.518;AN=56;BaseQRankSum=-2.877;DP=622;FS=4.501;HRun=0;HaplotypeScore=175.8815;InbreedingCoeff=0.9231;MQ=94.30;MQ0=2;MQRankSum=-17.556;QD=71.11;ReadPosRankSum=-3.425;VQSLOD=4.0409;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.32:0,93,2442	0/0:6,0:6:18.06:0,18,488	0/0:21,0:21:54.17:0,54,1303	0/0:47,0:46:99:0,109,2691	1/1:6,21:29:33.03:1148,33,0	1/1:1,11:12:27.09:895,27,0	1/1:12,21:33:66.22:2587,66,0	1/1:10,16:27:75.25:2427,75,0	1/1:4,22:26:60.20:2264,60,0	0/0:31,0:31:78.27:0,78,2080	0/0:21,0:21:54.17:0,54,1403	1/1:2,22:24:39.13:1676,39,0	0/0:13,0:13:33.11:0,33,859	1/1:11,13:24:66.22:2370,66,0	0/0:14,0:14:39.13:0,39,1058	0/0:17,0:16:48.16:0,48,1288	0/0:22,0:22:57.18:0,57,1449	0/0:11,0:10:24.08:0,24,635	1/1:8,8:17:42.14:1555,42,0	1/1:6,16:22:51.17:1737,51,0	1/1:9,12:19:21.07:477,21,0	0/0:18,0:18:54.17:0,54,1372	1/1:1,11:12:30.10:1098,30,0	1/1:12,17:30:39.28:1197,39,0	0/0:26,0:26:72.25:0,72,1921	0/1:14,13:27:18.29:2142,0,18	1/1:5,25:31:51.18:2171,51,0	1/1:1,3:5:12.04:505,12,0
chr10	90919439	.	A	ACCATGTTT	20291.84	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=2.607;DP=602;FS=1.435;HRun=0;HaplotypeScore=188.1336;InbreedingCoeff=0.6411;MQ=96.07;MQ0=3;MQRankSum=-17.950;QD=65.67;ReadPosRankSum=-0.115;VQSLOD=4.9624;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:76.32:0,76,2647	0/0:6,0:6:18.06:0,18,527	0/0:29,0:27:51.47:0,51,1551	0/0:48,0:45:99:0,116,3006	0/1:26,0:26:24.10:934,0,24	0/1:13,0:13:17.06:700,0,17	1/1:27,0:27:44.01:2172,44,0	0/1:26,0:26:34.79:1906,0,35	1/1:25,0:24:60.05:1922,60,0	0/0:29,0:29:81.27:0,81,2264	0/0:20,0:20:60.11:0,60,1559	1/1:19,0:19:39.13:1452,39,0	0/0:12,0:12:33.11:0,33,921	1/1:22,2:23:66:2083,66,0	0/0:16,0:16:48.12:0,48,1215	0/0:19,0:17:48.16:0,48,1372	0/0:19,0:19:57.06:0,57,1537	0/0:14,0:11:24.08:0,24,702	0/1:18,0:18:4.75:1256,0,5	1/1:19,1:19:50.79:1455,51,0	1/1:16,0:14:9.84:463,10,0	0/0:19,0:19:54.17:0,54,1475	1/1:12,0:12:29.91:929,30,0	1/1:25,1:26:11.25:985,11,0	0/0:26,0:26:75.24:0,75,2102	0/1:24,0:24:90.67:1730,0,91	1/1:28,0:28:33.22:1841,33,0	1/1:5,0:5:12.04:464,12,0
chr10	90919464	.	TTCCCTCTCTC	T	5170.65	PASS	AC=42;AF=0.778;AN=54;BaseQRankSum=5.165;DP=521;FS=3.516;HRun=0;HaplotypeScore=202.9161;InbreedingCoeff=0.9193;MQ=73.93;MQ0=16;MQRankSum=-5.744;QD=13.54;ReadPosRankSum=0.466;VQSLOD=3.5483;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60:0,60,647	0/0:6,0:6:18:0,18,158	0/0:28,0:20:18.37:0,18,417	0/0:32,0:20:23.92:0,24,419	1/1:19,0:19:11.99:100,12,0	1/1:13,0:13:20.72:201,21,0	1/1:26,0:25:20.53:144,21,0	1/1:25,0:24:63.57:497,64,0	1/1:17,0:16:18.22:125,18,0	1/1:2,25:26:71.90:681,72,0	1/1:14,0:13:35.90:292,36,0	1/1:14,0:13:14.84:160,15,0	1/1:14,0:14:26.96:245,27,0	1/1:22,0:21:26.43:159,26,0	0/0:20,0:20:48.02:0,48,482	1/1:19,0:16:38.91:328,39,0	0/0:18,0:17:47.52:0,48,538	1/1:13,0:10:20.82:155,21,0	1/1:10,0:10:26.92:220,27,0	1/1:17,0:16:11.86:83,12,0	./.	1/1:16,0:16:47.94:398,48,0	1/1:14,0:13:3:25,3,0	1/1:24,0:23:8.88:62,9,0	1/1:23,0:23:56.94:500,57,0	1/1:25,0:23:63.07:474,63,0	1/1:19,0:19:40.42:259,40,0	1/1:9,0:8:9.38:63,9,0
chr10	90920037	.	C	CAA	1330.81	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-0.857;DP=394;FS=16.947;HRun=13;HaplotypeScore=80.1260;InbreedingCoeff=0.8148;MQ=52.30;MQ0=15;MQRankSum=1.067;QD=15.12;ReadPosRankSum=-3.787;VQSLOD=0.0226;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:20:19.40:0,19,168	0/0:6,0:7:14.67:0,15,117	0/0:6,0:5:4.33:0,4,31	0/0:7,0:4:5.96:0,6,46	0/0:12,0:12:14.69:0,15,167	0/0:8,0:13:31.24:0,31,213	0/0:14,0:12:29.62:0,30,249	0/0:16,0:17:12.94:0,13,196	0/0:16,0:17:23.02:0,23,221	1/1:13,10:20:27.09:364,27,0	1/1:2,8:12:26.46:280,26,0	0/0:13,0:15:14.14:0,14,101	1/1:6,1:6:0.11:36,0,0	0/0:7,0:8:23.49:0,23,182	0/0:10,0:10:2.19:0,2,105	1/1:2,11:14:17.55:214,18,0	0/0:27,0:28:26.20:0,26,267	1/1:4,5:8:18.06:242,18,0	0/0:10,0:7:11.87:0,12,103	0/0:12,0:13:28.77:0,29,244	0/0:11,0:11:20.69:0,21,170	1/1:5,7:13:16.61:208,17,0	0/0:13,0:15:22.36:0,22,224	0/0:27,0:29:44.57:0,45,352	1/1:5,3:9:17.44:169,17,0	0/0:12,0:13:17.36:0,17,129	0/0:21,0:21:28.22:0,28,264	0/0:7,0:2:2.98:0,3,26
chr10	90920071	.	TTG	T	84.05	PASS	AB=0.924;AC=13;AF=0.500;AN=26;BaseQRankSum=2.872;DP=311;FS=6.455;HRun=0;HaplotypeScore=76.5683;InbreedingCoeff=0.1546;MQ=49.38;MQ0=22;MQRankSum=-2.154;QD=0.76;ReadPosRankSum=1.487;VQSLOD=0.8561;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:16:13.81:14,0,14	0/0:6,0:5:3.01:0,3,39	./.	./.	./.	1/1:11,0:11:2.84:14,3,0	0/0:20,0:17:3.01:0,3,38	./.	1/1:12,0:10:5.68:28,6,0	0/0:14,0:12:0.89:0,1,2	./.	0/1:9,0:7:5.56:8,0,6	./.	./.	0/0:6,0:6:6.01:0,6,65	./.	0/1:19,8:25:55.79:56,0,97	0/0:9,0:7:3.01:0,3,34	1/1:15,0:14:2.68:11,3,0	./.	./.	1/1:10,0:10:2.84:14,3,0	./.	./.	./.	1/1:10,0:8:8.52:42,9,0	./.	./.
chr10	90920106	.	TGTGTGTGTGTGTGTGTGTGC	T	1969.03	PASS	AB=0.996;AC=20;AF=0.455;AN=44;BaseQRankSum=1.663;DP=344;FS=3.751;HRun=0;HaplotypeScore=148.4381;InbreedingCoeff=-0.2250;MQ=40.94;MQ0=38;MQRankSum=-0.869;QD=8.41;ReadPosRankSum=-2.573;VQSLOD=2.1848;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:17:24.77:0,25,967	0/0:7,0:6:18.02:0,18,1070	./.	0/0:4,0:1:0:0,0,0	./.	0/1:8,0:8:55.38:83,0,55	0/1:25,0:21:99:105,0,402	0/1:16,0:11:88.16:88,0,109	0/1:17,0:14:99:208,0,172	0/1:12,0:10:99:173,0,205	./.	1/1:16,0:13:6.02:154,6,0	1/1:9,0:7:14.85:105,15,0	0/1:13,0:12:32.84:112,0,33	0/0:7,0:7:9.03:0,9,723	1/1:5,0:4:5.95:44,6,0	0/0:32,0:28:57.32:0,57,3184	0/1:17,0:14:99:185,0,225	0/1:11,0:7:60.88:91,0,61	./.	0/1:23,0:19:48.89:64,0,49	1/1:6,2:7:6.01:193,6,0	0/1:6,0:6:15.96:36,0,16	0/1:27,0:24:76.56:77,0,162	./.	0/1:20,1:19:99:393,0,142	0/0:15,0:14:2.46:0,2,24	./.
chr10	90920110	.	TGTGTGTGTGTGTGTGC	T	3483.56	PASS	AB=1.000;AC=31;AF=0.738;AN=42;BaseQRankSum=0.693;DP=323;FS=0.000;HRun=0;HaplotypeScore=124.0826;InbreedingCoeff=0.4171;MQ=41.94;MQ0=37;MQRankSum=-0.619;QD=15.08;ReadPosRankSum=-1.432;VQSLOD=1.8247;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:27.67:0,28,748	0/0:8,0:7:20.99:0,21,824	./.	./.	./.	1/1:5,2:7:6:166,6,0	0/1:26,0:22:99:295,0,206	1/1:18,0:13:18.15:200,18,0	1/1:16,1:14:2.98:407,3,0	0/1:12,0:10:99:160,0,149	./.	1/1:6,9:12:6.02:238,6,0	1/1:7,0:5:14.85:105,15,0	1/1:11,1:11:20.19:271,20,0	0/0:7,0:7:9.03:0,9,568	1/1:4,0:3:5.95:44,6,0	0/0:34,0:30:63.29:0,63,2515	0/1:14,0:11:99:164,0,176	1/1:11,0:7:4.41:170,4,0	./.	1/1:20,0:16:13.23:104,13,0	1/1:5,0:4:6.01:146,6,0	1/1:4,1:5:8.96:70,9,0	1/1:25,0:22:6.56:246,7,0	./.	1/1:18,2:18:30.75:670,31,0	1/1:13,0:12:3.47:26,3,0	./.
chr10	90920112	.	TGTGTGTGTGTGTGC	T	2967.04	PASS	AB=1.000;AC=32;AF=0.727;AN=44;BaseQRankSum=1.029;DP=305;FS=0.660;HRun=0;HaplotypeScore=111.6985;InbreedingCoeff=0.4654;MQ=42.29;MQ0=37;MQRankSum=-1.159;QD=13.67;ReadPosRankSum=-0.664;VQSLOD=2.1891;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:17:27.49:0,27,644	0/0:8,0:7:20.99:0,21,688	./.	0/1:2,0:1:0:0,0,0	./.	1/1:7,0:7:6.47:135,6,0	0/1:28,0:24:99:264,0,159	1/1:17,0:13:21.16:226,21,0	1/1:15,0:12:23.38:365,23,0	0/1:12,0:10:99:145,0,126	./.	1/1:13,0:10:6.02:191,6,0	1/1:7,0:5:14.85:105,15,0	1/1:11,0:10:20.27:226,20,0	0/0:7,0:7:9.03:0,9,491	1/1:4,0:3:5.95:44,6,0	0/0:34,0:30:63.28:0,63,2133	0/1:14,0:11:99:164,0,150	1/1:7,0:7:4.71:151,5,0	./.	1/1:20,0:16:13.72:104,14,0	1/1:5,0:4:6.01:132,6,0	1/1:3,1:4:5.96:45,6,0	1/1:20,0:19:29.03:249,29,0	./.	1/1:18,0:16:35.67:571,36,0	1/1:1,8:8:0.38:1,0,0	./.
chr10	90921100	.	T	TCACACACACA	2372.69	PASS	AB=0.786;AC=33;AF=0.868;AN=38;BaseQRankSum=-2.542;DP=99;FS=0.000;HRun=0;HaplotypeScore=67.8482;InbreedingCoeff=0.0769;MQ=87.84;MQ0=0;MQRankSum=-1.197;QD=30.03;ReadPosRankSum=-1.029;VQSLOD=2.5257;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:11:1.25:3,1,0	1/1:2,0:2:3.01:72,3,0	1/1:4,0:6:7.31:78,7,0	0/1:8,2:11:33.89:250,0,34	1/1:9,0:9:9.03:254,9,0	0/0:1,0:1:1.25:0,1,3	1/1:8,0:7:6.49:255,6,0	1/1:5,0:5:12.04:509,12,0	1/1:2,0:2:3.01:55,3,0	1/1:1,0:1:2.97:20,3,0	./.	1/1:1,0:1:3:25,3,0	./.	0/0:2,0:2:0.47:0,0,1	./.	1/1:2,0:2:3.01:96,3,0	1/1:2,0:2:3.01:129,3,0	./.	1/1:3,0:3:9.03:140,9,0	./.	1/1:3,0:3:3.01:40,3,0	./.	1/1:4,0:4:0.61:21,1,0	./.	./.	1/1:2,0:2:5.98:125,6,0	1/1:6,0:6:9.03:387,9,0	./.
chr10	90921235	.	TAC	T	849.18	PASS	AB=1.000;AC=26;AF=0.520;AN=50;BaseQRankSum=4.323;DP=396;FS=0.000;HRun=0;HaplotypeScore=77.7054;InbreedingCoeff=0.4655;MQ=49.64;MQ0=19;MQRankSum=4.021;QD=3.69;ReadPosRankSum=1.648;VQSLOD=2.0238;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:38.76:39,0,147	0/1:10,0:10:27.66:28,0,30	0/0:17,0:11:8.80:0,9,59	0/0:14,0:3:0.47:0,0,1	1/1:14,0:14:5.98:46,6,0	./.	1/1:14,1:11:11.87:86,12,0	1/1:12,0:14:8.71:50,9,0	./.	0/0:21,0:21:44.55:0,45,322	0/0:16,0:16:8.92:0,9,64	1/1:9,0:9:17.52:138,18,0	0/0:5,0:5:8.69:0,9,48	./.	0/0:13,0:13:22.37:0,22,155	0/0:8,0:8:8.77:0,9,50	0/1:27,0:27:5.42:5,0,233	0/0:5,0:3:7.21:0,7,47	1/1:10,0:9:2.83:24,3,0	1/1:20,0:20:18.24:128,18,0	0/1:13,0:13:2.04:98,0,2	0/0:15,0:14:5.99:0,6,48	1/1:14,0:14:20.92:162,21,0	1/1:12,0:12:2.90:16,3,0	0/0:11,0:11:2.49:0,2,6	1/1:17,0:17:19.67:160,20,0	1/1:23,0:23:2.62:18,3,0	1/1:0,6:6:2.96:19,3,0
chr10	90921261	.	CACACACAG	C	2825.76	PASS	AB=0.886;AC=23;AF=0.411;AN=56;BaseQRankSum=-1.658;DP=421;FS=7.254;HRun=0;HaplotypeScore=99.5571;InbreedingCoeff=0.2559;MQ=43.37;MQ0=30;MQRankSum=3.302;QD=11.73;ReadPosRankSum=1.623;VQSLOD=1.5284;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:36.02:0,36,743	0/0:7,0:7:17.83:0,18,290	0/0:6,0:4:12.04:0,12,254	0/0:11,0:1:1.55:0,2,4	1/1:9,0:9:6.02:123,6,0	0/0:16,0:16:3:0,3,25	0/1:22,0:16:27.62:268,0,28	1/1:17,0:15:8.70:179,9,0	0/1:17,0:15:15.97:38,0,16	0/0:20,0:19:48.16:0,48,1009	0/0:19,0:18:9.03:0,9,206	0/1:14,0:14:48.77:343,0,49	0/0:11,0:10:9.03:0,9,148	1/1:13,0:13:2.98:21,3,0	0/0:17,0:17:30.09:0,30,633	0/0:7,0:7:8.98:0,9,122	0/0:22,0:22:54.13:0,54,1086	0/0:7,0:4:11.77:0,12,179	1/1:11,0:9:1.99:60,2,0	1/1:16,0:14:7.04:385,7,0	0/1:23,0:21:99:334,0,148	0/0:14,0:13:6.02:0,6,144	1/1:13,0:12:27.05:474,27,0	0/1:21,0:15:58.29:58,0,76	1/1:12,0:12:4.07:11,4,0	0/1:11,0:21:53.84:588,0,54	0/1:3,18:21:19.81:49,0,20	1/1:10,0:10:3.76:68,4,0
chr10	90921687	.	G	GA	9416.13	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-9.392;DP=428;FS=8.507;HRun=9;HaplotypeScore=40.4188;InbreedingCoeff=0.9164;MQ=79.59;MQ0=0;MQRankSum=-1.811;QD=26.83;ReadPosRankSum=2.557;VQSLOD=4.9355;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:41.97:0,42,365	0/0:3,0:3:9:0,9,78	0/0:13,0:14:29.01:0,29,234	0/1:6,0:6:0.12:0,0,40	1/1:1,17:19:53.91:563,54,0	1/1:1,18:19:51.14:564,51,0	1/1:1,10:11:30.08:332,30,0	1/1:7,12:19:33.08:358,33,0	1/1:1,9:10:24.06:266,24,0	1/1:6,19:25:57.12:618,57,0	1/1:5,21:26:28.08:530,28,0	1/1:1,6:7:15.04:166,15,0	1/1:1,5:6:12.03:133,12,0	1/1:1,12:13:36.10:398,36,0	0/0:18,0:18:50.97:0,51,439	1/1:2,10:12:30.08:332,30,0	0/0:24,0:24:65.94:0,66,567	1/1:0,24:24:69.19:763,69,0	1/1:2,7:9:21.05:224,21,0	1/1:2,20:22:63.14:681,63,0	1/1:1,6:7:21.05:224,21,0	1/1:0,12:12:36.10:398,36,0	1/1:2,9:12:29.91:310,30,0	1/1:0,5:5:15.04:166,15,0	1/1:0,12:12:33.09:365,33,0	1/1:5,26:31:75.20:829,75,0	1/1:3,19:21:54.15:597,54,0	1/1:2,20:22:54.15:597,54,0
chr10	90922882	.	A	ACGCTCACT	35829.88	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-5.840;DP=629;FS=0.403;HRun=0;HaplotypeScore=155.0466;InbreedingCoeff=0.9780;MQ=75.75;MQ0=0;MQRankSum=-14.979;QD=73.57;ReadPosRankSum=1.435;VQSLOD=5.0891;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,129,3373	0/0:4,0:4:12.04:0,12,313	0/0:19,0:19:36.94:0,37,819	0/0:19,0:20:27.02:0,27,899	1/1:5,13:18:33.11:1346,33,0	1/1:4,17:21:51.18:2153,51,0	1/1:13,27:40:93.32:3855,93,0	1/1:12,13:25:45.14:1480,45,0	1/1:4,21:26:60.21:2500,60,0	1/1:15,14:29:57.13:2074,57,0	1/1:7,12:19:36.12:1503,36,0	1/1:9,19:29:63.22:2683,63,0	1/1:5,14:19:42.14:1790,42,0	1/1:7,18:28:51.18:2112,51,0	0/0:24,0:24:60.21:0,60,1567	1/1:5,15:24:36.12:1536,36,0	0/0:26,0:26:69.22:0,69,1730	1/1:10,6:17:21.07:848,21,0	1/1:8,9:16:33.10:1305,33,0	1/1:6,15:22:42.14:1763,42,0	1/1:19,7:30:24.04:931,24,0	1/1:9,8:17:18.06:764,18,0	1/1:11,9:20:27.09:1150,27,0	1/1:17,11:29:39.13:1628,39,0	1/1:7,8:16:24.08:1010,24,0	1/1:10,12:22:48.16:1913,48,0	1/1:6,8:16:27.09:1100,27,0	1/1:0,3:3:9.03:385,9,0
chr10	90924958	.	C	CAGTGAGACCAGGAAAG	60818.56	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-4.210;DP=650;FS=4.815;HRun=0;HaplotypeScore=212.4593;InbreedingCoeff=0.9919;MQ=70.71;MQ0=0;MQRankSum=-16.091;QD=126.18;ReadPosRankSum=-3.027;VQSLOD=3.9348;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,144,6339	0/0:7,0:7:21.07:0,21,969	0/0:21,0:21:60.21:0,60,2383	0/0:14,0:14:26.98:0,27,792	1/1:4,6:21:27.09:1241,27,0	1/1:6,10:21:33.11:2429,33,0	1/1:7,9:30:45.15:3240,45,0	1/1:39,0:39:99:5885,102,0	1/1:7,9:20:48.16:3246,48,0	1/1:6,9:30:81.19:5072,81,0	1/1:7,11:22:48.16:2944,48,0	1/1:5,12:24:51.17:3401,51,0	1/1:2,9:15:33.11:2419,33,0	1/1:7,11:23:48.16:3210,48,0	0/0:33,0:33:99:0,99,4478	1/1:5,7:21:33.11:2220,33,0	0/0:40,0:40:99:0,111,4739	1/1:8,7:22:39.13:2997,39,0	1/1:7,2:20:51.14:2276,51,0	1/1:6,4:20:33.11:1808,33,0	1/1:21,1:22:48.11:1955,48,0	1/1:6,7:20:27.09:1750,27,0	1/1:3,6:13:33.11:2005,33,0	1/1:10,11:33:39.10:2601,39,0	1/1:7,7:15:39.13:2321,39,0	1/1:11,9:28:81.21:5365,81,0	1/1:5,6:17:30.10:1796,30,0	1/1:2,2:6:12.04:634,12,0
chr10	90925114	.	ATGTGTGTG	A	1793	PASS	AB=0.683;AC=35;AF=0.700;AN=50;BaseQRankSum=3.621;DP=653;FS=0.779;HRun=0;HaplotypeScore=162.6360;InbreedingCoeff=0.5373;MQ=51.51;MQ0=18;MQRankSum=-1.233;QD=4.32;ReadPosRankSum=0.059;VQSLOD=2.2367;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:41:60.68:0,61,1903	0/0:15,0:18:24.06:0,24,547	./.	./.	1/1:16,0:15:9.03:150,9,0	0/0:15,2:16:2.98:0,3,21	1/1:27,10:38:10.66:147,11,0	1/1:34,0:33:10.60:146,11,0	./.	1/1:10,0:23:12.98:64,13,0	0/1:5,0:10:0:0,0,0	1/1:8,7:16:6.02:151,6,0	1/1:3,0:11:12.04:223,12,0	0/1:8,6:15:0.45:0,0,1	0/0:26,0:31:42.61:0,43,1193	1/1:4,0:11:0.47:1,0,0	0/0:12,0:18:18.06:0,18,626	1/1:8,0:21:5.44:110,5,0	1/1:13,4:16:12.01:244,12,0	1/1:7,12:20:0.47:1,0,0	0/1:42,27:69:13.70:45,0,14	1/1:7,0:16:0.45:1,0,0	1/1:8,5:13:0.47:1,0,0	1/1:19,12:32:2.33:19,2,0	0/0:13,0:22:0:0,0,0	1/1:14,10:24:15.12:223,15,0	1/1:9,10:21:5.21:337,5,0	1/1:6,1:6:3.01:76,3,0
chr10	90925554	.	C	CTTTCTTTCTTTCTTTCT	6313.47	PASS	AB=0.996;AC=23;AF=0.411;AN=56;BaseQRankSum=5.012;DP=549;FS=30.772;HRun=0;HaplotypeScore=227.5871;InbreedingCoeff=0.2497;MQ=40.99;MQ0=29;MQRankSum=-3.970;QD=18.30;ReadPosRankSum=-1.952;VQSLOD=2.3511;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:43:29.97:0,30,1436	0/0:2,0:6:3.73:0,4,31	0/0:52,0:6:9.43:0,9,40	0/1:58,0:14:32.48:38,0,32	0/1:19,0:19:12.71:13,0,530	0/0:13,0:12:10.43:0,10,497	0/0:2,0:1:3:0,3,27	0/1:24,0:24:4.05:4,0,416	0/0:8,0:7:6.52:0,7,155	1/1:14,12:30:41.53:2048,42,0	1/1:21,0:20:40.43:895,40,0	0/0:8,0:7:5.31:0,5,232	1/1:12,0:12:27.55:722,28,0	0/0:9,0:8:11.58:0,12,196	0/0:15,0:18:17.78:0,18,927	1/1:20,0:21:27.85:888,28,0	0/0:35,0:31:44.92:0,45,1970	1/1:21,0:20:34.75:1131,35,0	0/1:16,0:13:13.17:13,0,144	0/1:11,0:10:2.55:3,0,221	0/0:4,0:4:5.77:0,6,132	1/1:15,0:14:14.17:181,14,0	0/1:6,0:6:16.26:16,0,40	0/0:6,0:5:9.47:0,9,125	1/1:18,0:18:3.01:214,3,0	0/1:20,0:19:55.97:56,0,321	0/1:18,0:18:59.94:60,0,130	0/1:30,0:29:32.08:32,0,46
chr10	90925557	.	T	TCTTTCTTTCTTTCTT	5712.90	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-1.906;DP=549;FS=6.173;HRun=0;HaplotypeScore=212.3763;InbreedingCoeff=0.6973;MQ=39.93;MQ0=32;MQRankSum=-0.732;QD=24.62;ReadPosRankSum=2.148;VQSLOD=3.0674;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:70.94:0,71,1556	0/1:8,0:8:2.49:6,0,2	0/0:61,0:8:12.85:0,13,68	0/1:64,0:15:5.31:5,0,64	0/0:19,0:19:39.44:0,39,653	0/0:12,0:11:32.82:0,33,566	0/0:2,0:1:3:0,3,27	0/0:21,0:21:27.91:0,28,462	0/0:8,0:7:15.41:0,15,173	1/1:23,0:26:32.68:1772,33,0	1/1:23,0:21:48.97:903,49,0	0/0:7,0:6:17:0,17,260	1/1:12,0:13:29.51:872,30,0	0/0:9,0:8:13.77:0,14,231	0/0:17,0:17:32.94:0,33,917	1/1:20,0:21:30.13:908,30,0	0/0:36,0:32:72.18:0,72,1945	1/1:21,0:20:36.66:883,37,0	0/0:15,0:12:24.62:0,25,221	0/0:11,0:10:13.38:0,13,264	0/0:4,0:4:9.37:0,9,148	1/1:3,0:16:13.65:154,14,0	0/0:5,0:5:6.28:0,6,59	0/0:5,0:4:9:0,9,126	1/1:0,1:19:2.53:192,3,0	0/1:18,0:17:18.71:19,0,383	0/0:17,0:17:28.25:0,28,278	0/0:24,0:23:34.05:0,34,175
chr10	90927303	.	C	CT	1355.33	PASS	AB=0.811;AC=27;AF=0.482;AN=56;BaseQRankSum=-6.136;DP=412;FS=0.000;HRun=16;HaplotypeScore=57.2246;InbreedingCoeff=0.1602;MQ=66.29;MQ0=7;MQRankSum=0.591;QD=5.02;ReadPosRankSum=-2.181;VQSLOD=1.1083;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:22:29.12:0,29,150	0/1:5,2:8:10.14:10,0,42	0/1:19,1:7:1.09:1,0,9	0/1:22,0:12:6.36:6,0,26	1/1:6,12:18:10.10:163,10,0	1/1:8,10:17:11.94:196,12,0	1/1:0,0:1:2.84:14,3,0	1/1:10,10:21:23.82:178,24,0	1/1:3,10:14:1.05:93,1,0	0/0:4,0:12:14.14:0,14,41	0/0:8,0:21:22.14:0,22,77	0/1:5,3:8:15.11:15,0,24	0/0:3,0:4:4.01:0,4,11	1/1:5,1:5:7.53:50,8,0	0/0:9,0:8:16.56:0,17,87	0/0:2,0:11:15.13:0,15,51	0/0:28,0:30:47.33:0,47,260	0/0:6,1:25:11.43:0,11,79	0/1:20,4:24:12.55:134,0,13	0/1:7,10:17:22.88:78,0,23	0/1:3,4:7:10.58:18,0,11	0/0:2,0:5:6.85:0,7,19	0/1:8,1:9:18.53:34,0,19	1/1:2,8:10:15.44:120,15,0	0/1:4,1:13:4.71:5,0,27	0/1:13,7:20:12.57:99,0,13	0/1:11,4:15:8.68:120,0,9	1/1:4,12:17:2.73:196,3,0
chr10	90930541	.	G	GC	5632.31	PASS	AB=0.938;AC=53;AF=0.946;AN=56;BaseQRankSum=1.518;DP=618;FS=0.744;HRun=4;HaplotypeScore=235.3812;InbreedingCoeff=0.6231;MQ=75.31;MQ0=0;MQRankSum=-4.061;QD=9.47;ReadPosRankSum=0.886;VQSLOD=1.7466;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:43.59:198,44,0	1/1:17,0:17:30.09:145,30,0	0/0:22,1:23:13.86:0,14,345	0/1:14,1:15:39.42:39,0,129	1/1:29,1:30:43.48:225,43,0	1/1:19,1:20:41.98:232,42,0	1/1:26,0:26:37.66:195,38,0	1/1:20,0:20:54.81:355,55,0	1/1:20,0:20:40.64:195,41,0	1/1:25,1:26:40.86:334,41,0	1/1:23,0:23:41.77:223,42,0	1/1:27,1:29:60.99:343,61,0	1/1:15,0:16:28.05:153,28,0	1/1:28,0:28:38.78:193,39,0	1/1:23,0:23:41.90:220,42,0	1/1:21,0:21:27.78:133,28,0	1/1:29,0:29:36.24:185,36,0	1/1:13,0:13:20.19:70,20,0	1/1:27,0:27:64.50:393,64,0	1/1:16,0:16:27.32:132,27,0	1/1:27,0:27:34.58:161,35,0	1/1:17,0:17:32.84:165,33,0	1/1:19,0:19:31.36:155,31,0	1/1:21,0:21:32.82:170,33,0	1/1:17,0:17:30.68:173,31,0	1/1:28,2:30:72.29:463,72,0	1/1:28,0:28:61.03:294,61,0	1/1:11,0:11:21.53:87,22,0
chr10	90931224	.	A	AGT	6196.10	PASS	AB=0.655;AC=11;AF=0.196;AN=56;BaseQRankSum=-11.850;DP=1051;FS=9.309;HRun=0;HaplotypeScore=176.7230;InbreedingCoeff=0.7389;MQ=65.47;MQ0=16;MQRankSum=-1.707;QD=28.04;ReadPosRankSum=0.762;VQSLOD=5.7668;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:55:98.22:0,98,1241	0/0:16,0:16:33.10:0,33,397	0/0:50,0:28:25.09:0,25,246	0/0:43,0:29:12.99:0,13,217	0/0:25,0:25:35.24:0,35,661	0/0:27,0:27:66.18:0,66,775	0/0:45,0:45:69.44:0,69,880	0/0:56,0:54:25.27:0,25,714	0/0:34,0:34:84.26:0,84,1012	1/1:30,18:45:69.14:1504,69,0	0/1:4,19:22:3.07:449,0,3	0/0:35,0:35:95.82:0,96,1090	1/1:16,14:30:66.17:961,66,0	0/0:50,0:51:99:0,112,1389	0/0:48,0:48:99:0,108,1273	1/1:13,29:39:56.62:1361,57,0	0/0:35,0:37:56.86:0,57,833	0/1:11,8:18:7.65:506,0,8	0/0:24,0:22:48.15:0,48,578	0/0:23,0:24:57.17:0,57,687	0/0:106,0:104:99:0,180,2197	1/1:16,17:30:46.34:798,46,0	0/0:16,0:17:39.10:0,39,470	0/0:37,0:35:80.80:0,81,934	0/1:15,10:24:6.77:618,0,7	0/0:43,2:45:17.81:0,18,1168	0/0:27,0:26:62.86:0,63,722	0/0:22,0:23:56.98:0,57,643
chr10	90931265	.	GTA	G	5380.25	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=8.353;DP=1115;FS=0.000;HRun=0;HaplotypeScore=203.5060;InbreedingCoeff=0.5507;MQ=50.70;MQ0=30;MQRankSum=1.922;QD=8.54;ReadPosRankSum=5.267;VQSLOD=4.0090;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,1:48:99:0,132,2304	0/0:9,0:9:24.08:0,24,441	0/0:38,0:8:24.07:0,24,391	0/0:52,0:13:27.45:0,27,506	1/1:27,0:27:31.64:301,32,0	1/1:30,0:27:33.95:285,34,0	0/1:43,0:43:27.95:353,0,28	0/1:65,0:56:99:444,0,108	1/1:44,1:37:20.68:267,21,0	0/0:48,0:44:99:0,123,2055	0/0:21,0:20:42.05:0,42,664	1/1:37,1:36:25.50:378,26,0	0/0:38,0:33:42.55:0,43,973	1/1:53,1:48:24.59:509,25,0	0/0:53,0:53:99:0,143,2554	0/0:60,0:51:81.55:0,82,1450	0/0:33,0:32:75.94:0,76,1302	0/0:27,0:26:7.39:0,7,921	0/1:32,0:23:44.22:192,0,44	1/1:33,0:33:42.35:324,42,0	1/1:95,2:93:26.40:733,26,0	0/0:33,0:29:53.97:0,54,862	1/1:25,1:26:49.39:314,49,0	0/1:40,0:38:47.23:322,0,47	0/0:21,0:21:29.91:0,30,495	0/1:48,0:47:81.66:478,0,82	0/1:36,0:32:16.42:264,0,16	1/1:16,0:16:18.94:217,19,0
chr10	90931267	.	ATG	A	15416.15	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=0.586;DP=1133;FS=2.299;HRun=0;HaplotypeScore=174.9910;InbreedingCoeff=0.9992;MQ=50.58;MQ0=29;MQRankSum=2.598;QD=24.24;ReadPosRankSum=1.180;VQSLOD=5.6657;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:49:99:0,120,1971	0/0:9,0:9:24.07:0,24,385	0/0:43,0:9:27.01:0,27,428	0/0:56,0:14:38.84:0,39,526	1/1:4,23:27:54.18:717,54,0	1/1:7,24:28:63.19:819,63,0	1/1:9,35:44:87.16:1157,87,0	1/1:19,42:53:69.57:1381,70,0	1/1:14,32:38:71.87:881,72,0	0/0:51,0:47:99:0,126,1904	0/0:21,0:20:33.11:0,33,567	1/1:10,27:35:69.22:912,69,0	0/0:38,0:33:58.39:0,58,907	1/1:18,36:48:96.05:1228,96,0	0/0:53,0:53:99:0,144,2325	0/0:58,0:49:72.25:0,72,1221	0/0:33,1:33:76.78:0,77,1227	0/0:28,0:27:52.71:0,53,909	1/1:17,13:22:46.39:613,46,0	1/1:10,23:33:66.20:859,66,0	1/1:40,63:98:99:2315,180,0	0/0:35,0:30:42.11:0,42,648	1/1:6,20:26:53.96:683,54,0	1/1:17,25:40:81.22:1039,81,0	0/0:20,0:20:24.08:0,24,407	1/1:19,29:47:38.19:1527,38,0	1/1:10,27:33:57.15:731,57,0	1/1:1,15:16:42.14:555,42,0
chr10	90931309	.	ATGTGTGTATG	A	5635.93	PASS	AB=0.996;AC=17;AF=0.315;AN=54;BaseQRankSum=-1.757;DP=1245;FS=0.000;HRun=0;HaplotypeScore=362.3817;InbreedingCoeff=0.5224;MQ=49.18;MQ0=25;MQRankSum=-5.810;QD=10.57;ReadPosRankSum=-0.428;VQSLOD=2.0856;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:40:84.20:0,84,3189	0/0:12,0:12:24.08:0,24,1101	0/0:68,0:16:30.82:0,31,600	0/0:69,0:26:43.54:0,44,1123	0/0:34,0:34:7.72:0,8,1014	0/1:27,0:24:12.13:12,0,597	0/0:47,0:47:29.56:0,30,2349	0/1:69,0:59:59.44:59,0,1210	0/0:47,0:41:42.83:0,43,1709	1/1:12,60:68:99:3541,159,0	1/1:13,5:17:21.02:314,21,0	0/0:38,0:36:21.65:0,22,1497	1/1:4,35:32:15.72:500,16,0	0/0:52,0:45:40.93:0,41,1747	0/0:51,0:51:99:0,126,5270	1/1:5,60:53:5.29:109,5,0	0/0:40,0:38:78.21:0,78,3661	1/1:17,2:19:36.36:677,36,0	0/1:31,0:30:37.59:38,0,1247	0/0:37,0:37:9.04:0,9,1212	0/1:106,0:103:24.84:25,0,3429	1/1:14,25:37:12.04:324,12,0	0/0:39,0:39:38.48:0,38,1987	0/0:43,0:43:22.62:0,23,1708	./.	0/1:45,1:46:36.09:36,0,2505	0/0:41,0:38:58.18:0,58,1908	0/0:24,0:24:18.96:0,19,908
chr10	90931317	.	ATG	A	17060.39	PASS	AB=0.995;AC=37;AF=0.685;AN=54;BaseQRankSum=8.927;DP=1233;FS=3.902;HRun=0;HaplotypeScore=181.2474;InbreedingCoeff=0.6721;MQ=49.29;MQ0=26;MQRankSum=0.775;QD=19.10;ReadPosRankSum=0.627;VQSLOD=4.4666;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:40:93.28:0,93,1515	0/0:11,0:11:27.09:0,27,459	0/0:67,0:15:34.35:0,34,490	0/0:65,0:24:48.96:0,49,798	1/1:6,28:34:45.12:580,45,0	1/1:5,22:24:33.11:437,33,0	1/1:14,30:44:99:1387,108,0	1/1:36,32:58:99:1427,111,0	1/1:13,38:46:96.30:1259,96,0	0/1:68,0:65:24.44:439,0,24	0/1:18,0:18:14.88:15,0,50	1/1:5,34:37:60.18:783,60,0	1/1:38,0:31:8.93:55,9,0	1/1:8,43:44:72.18:956,72,0	0/0:52,0:52:99:0,138,2329	1/1:62,0:51:2.55:14,3,0	0/0:36,0:34:81.23:0,81,1390	0/1:21,0:21:46.39:77,0,46	1/1:11,25:32:78.07:927,78,0	1/1:7,30:37:54.18:716,54,0	1/1:51,52:100:99:2496,193,0	0/0:38,0:36:1.55:0,2,12	1/1:8,30:38:84.28:1116,84,0	1/1:18,25:43:90.29:1194,90,0	./.	1/1:7,39:46:99:1595,126,0	1/1:4,38:40:75.16:995,75,0	1/1:7,16:23:45.15:591,45,0
chr10	90931624	.	A	ATG	16090.74	PASS	AC=30;AF=0.556;AN=54;BaseQRankSum=-9.881;DP=1352;FS=0.643;HRun=0;HaplotypeScore=338.8834;InbreedingCoeff=0.9875;MQ=45.54;MQ0=27;MQRankSum=1.744;QD=24.12;ReadPosRankSum=0.917;VQSLOD=4.2302;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:53.43:0,53,945	0/0:11,0:10:15.03:0,15,175	./.	0/0:61,1:9:8.47:0,8,81	1/1:7,27:34:36.12:597,36,0	1/1:7,26:32:36.12:604,36,0	1/1:9,26:33:30.08:496,30,0	1/1:17,15:24:30.08:468,30,0	1/1:17,45:57:78.02:1253,78,0	0/0:107,0:97:99:0,244,3385	0/0:35,0:31:23.89:0,24,310	1/1:8,43:48:68.86:1086,69,0	0/0:58,0:57:99:0,105,1335	1/1:12,42:52:48.16:812,48,0	0/0:76,0:75:86.26:0,86,1114	0/0:67,0:67:99:0,108,1346	0/0:36,0:36:87.27:0,87,1112	0/0:35,0:33:65.46:0,65,971	1/1:12,18:18:42.10:668,42,0	1/1:11,30:42:57.19:959,57,0	1/1:31,69:98:99:3636,228,0	0/0:58,0:52:23.86:0,24,312	1/1:8,31:38:54.16:890,54,0	1/1:8,46:54:72.22:1185,72,0	0/0:41,0:37:47.86:0,48,612	1/1:15,40:50:78.14:1943,78,0	1/1:3,26:29:54.18:901,54,0	1/1:1,12:13:36.12:593,36,0
chr10	90931697	.	ATG	A	10338.26	PASS	AB=0.639;AC=27;AF=0.482;AN=56;BaseQRankSum=5.372;DP=1285;FS=13.081;HRun=0;HaplotypeScore=347.6236;InbreedingCoeff=0.7507;MQ=40.92;MQ0=22;MQRankSum=3.920;QD=16.33;ReadPosRankSum=3.297;VQSLOD=3.8934;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:45.14:0,45,746	0/0:13,0:11:15.05:0,15,260	0/0:60,0:21:42.36:0,42,861	0/0:68,0:25:62.79:0,63,982	1/1:20,17:30:24.13:356,24,0	1/1:5,17:21:20.52:278,21,0	1/1:11,16:24:45.90:597,46,0	1/1:7,21:25:43.10:681,43,0	1/1:21,38:58:67.32:900,67,0	0/0:96,6:85:94.97:0,95,2745	0/0:30,4:29:24.08:0,24,416	1/1:18,37:55:74.32:974,74,0	0/0:47,0:45:74.31:0,74,1210	1/1:16,26:39:37.68:537,38,0	0/0:78,0:78:78.24:0,78,1267	0/0:72,1:72:79.98:0,80,1437	0/0:31,0:29:65.72:0,66,1179	0/0:26,0:25:61.89:0,62,946	1/1:16,9:18:1.28:321,1,0	1/1:30,29:43:40.36:663,40,0	1/1:37,53:88:99:1715,131,0	0/0:49,8:44:42.14:0,42,699	1/1:15,17:26:29.60:398,30,0	1/1:10,31:39:62.94:835,63,0	0/0:26,3:26:18.06:0,18,312	0/1:26,31:48:90.56:1069,0,91	0/1:14,20:29:38.28:486,0,38	0/1:11,14:22:20.13:528,0,20
chr10	90931721	.	GTA	G	1476.14	PASS	AB=0.829;AC=8;AF=0.143;AN=56;BaseQRankSum=10.230;DP=1219;FS=66.536;HRun=0;HaplotypeScore=327.7760;InbreedingCoeff=-0.1680;MQ=38.23;MQ0=30;MQRankSum=-10.840;QD=3.78;ReadPosRankSum=0.505;VQSLOD=0.2205;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:33.07:0,33,566	0/0:10,6:12:5.93:0,6,211	0/0:57,0:15:44.82:0,45,767	0/0:52,1:20:47.06:0,47,672	0/0:32,7:30:15.05:0,15,293	0/0:19,3:21:22.01:0,22,395	0/0:22,6:26:39.12:0,39,696	0/1:25,9:26:99:218,0,680	0/0:42,14:56:68.49:0,68,1107	0/1:59,32:73:99:593,0,1941	0/0:28,8:31:17.92:0,18,307	0/1:42,11:53:39.44:39,0,948	0/0:39,9:46:47.61:0,48,936	0/0:31,11:40:35.50:0,36,574	0/0:54,15:69:48.12:0,48,893	0/0:54,10:63:54.49:0,54,1036	0/0:21,0:19:6.11:0,6,645	0/0:22,1:22:9.48:0,9,685	0/1:31,9:20:99:133,0,641	0/1:53,12:45:1.44:1,0,563	0/0:69,1:65:96.30:0,96,1799	0/0:45,16:49:35.85:0,36,616	0/0:28,6:26:27.04:0,27,488	0/0:30,2:30:42.11:0,42,726	0/0:18,3:18:9.50:0,9,175	0/1:43,15:49:99:482,0,1485	0/1:25,7:28:99:130,0,531	0/1:18,0:15:6.47:6,0,605
chr10	90931748	.	A	AGT	140.95	PASS	AB=0.987;AC=15;AF=0.278;AN=54;BaseQRankSum=3.272;DP=830;FS=1.568;HRun=0;HaplotypeScore=202.7474;InbreedingCoeff=0.0604;MQ=33.95;MQ0=11;MQRankSum=-3.016;QD=0.36;ReadPosRankSum=0.255;VQSLOD=2.4384;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,1:23:2.45:0,2,38	0/0:13,0:11:2.40:0,2,61	0/0:22,0:5:9.01:0,9,98	0/0:19,0:7:8.72:0,9,69	0/1:31,0:25:0:4,0,0	1/1:16,2:17:0.45:1,0,0	0/1:19,0:17:0.01:0,0,0	0/1:16,0:12:8.95:9,0,55	0/1:38,1:39:18.41:29,0,18	0/1:61,3:49:99:110,0,372	0/0:24,0:20:1.24:0,1,38	0/1:36,1:37:22.74:23,0,35	0/0:30,7:36:4.24:0,4,32	0/0:36,0:34:2.29:0,2,24	0/0:56,0:56:9.52:0,10,90	0/0:42,13:55:4.69:0,5,59	0/0:11,0:11:5.78:0,6,61	0/0:15,1:16:17.78:0,18,196	0/1:19,0:14:0.01:0,0,0	0/1:50,0:32:0.51:19,0,1	1/1:36,1:34:2.86:18,3,0	0/0:45,1:37:2.74:0,3,62	0/0:23,0:17:0.68:0,1,2	1/1:23,0:21:2.46:23,2,0	0/0:17,0:15:0.29:0,0,1	0/1:41,1:33:23.39:23,0,24	0/0:23,0:19:0.74:0,1,14	./.
chr10	90934910	.	C	CACACAC	3679.55	PASS	AB=1.000;AC=39;AF=0.813;AN=48;BaseQRankSum=-7.563;DP=518;FS=1.217;HRun=0;HaplotypeScore=189.2165;InbreedingCoeff=0.1230;MQ=51.50;MQ0=5;MQRankSum=-5.817;QD=8.42;ReadPosRankSum=-4.376;VQSLOD=1.4531;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:41:5.19:5,0,368	0/0:15,0:15:13.59:0,14,254	0/1:25,0:11:45.44:72,0,45	0/0:27,0:14:4.72:0,5,41	./.	1/1:9,0:9:8.23:67,8,0	1/1:14,0:13:11.19:93,11,0	1/1:9,0:8:9.89:93,10,0	./.	1/1:31,0:30:50.78:1238,51,0	1/1:23,0:23:3.01:44,3,0	./.	1/1:31,0:31:23.85:408,24,0	1/1:13,0:13:5.89:64,6,0	0/1:36,0:36:55.65:56,0,353	1/1:24,0:24:14.05:170,14,0	0/1:27,0:27:32.22:32,0,405	1/1:15,0:15:22.06:555,22,0	1/1:10,0:9:17.84:175,18,0	1/1:11,0:11:5.99:50,6,0	1/1:13,0:13:8.97:88,9,0	1/1:29,0:29:2.67:25,3,0	1/1:10,0:10:3.01:43,3,0	1/1:17,0:17:8.96:72,9,0	1/1:19,6:26:3:25,3,0	0/1:16,0:16:22.86:286,0,23	1/1:7,0:6:2.96:19,3,0	./.
chr10	90934919	.	C	CACACA	1655.53	PASS	AB=0.864;AC=20;AF=0.400;AN=50;BaseQRankSum=-2.793;DP=503;FS=4.223;HRun=0;HaplotypeScore=186.3487;InbreedingCoeff=-0.0525;MQ=49.14;MQ0=9;MQRankSum=-4.367;QD=5.39;ReadPosRankSum=-2.346;VQSLOD=2.3749;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:46.14:0,46,721	0/0:14,0:14:31.24:0,31,438	0/1:27,0:9:3.40:3,0,123	0/0:21,0:7:4.99:0,5,62	./.	0/0:9,0:9:2.22:0,2,26	0/1:11,0:10:5.12:5,0,5	0/0:9,0:8:7.54:0,8,45	./.	0/1:24,5:31:23.01:890,0,23	0/1:14,7:21:8.51:15,0,9	0/1:14,0:13:0:0,0,0	0/1:29,4:36:39.39:237,0,39	1/1:12,0:12:2.89:12,3,0	0/0:33,0:33:30.71:0,31,688	0/1:17,6:25:9.26:155,0,9	0/0:27,0:27:51.75:0,52,729	0/1:9,5:14:31.06:338,0,31	0/0:8,0:8:5.23:0,5,61	0/0:12,0:12:5.60:0,6,26	1/1:10,0:10:2.04:6,2,0	0/1:21,9:34:12.40:12,0,17	1/1:9,0:10:1.82:5,2,0	0/1:11,0:11:4.10:4,0,9	0/1:21,5:26:1.42:1,0,70	0/1:13,1:14:95.41:99,0,95	1/1:8,0:7:0.47:1,0,0	./.
chr10	90934922	.	CGCAT	C	1110.77	PASS	AB=0.988;AC=28;AF=0.560;AN=50;BaseQRankSum=-4.119;DP=494;FS=10.359;HRun=0;HaplotypeScore=177.9701;InbreedingCoeff=-0.2488;MQ=48.90;MQ0=8;MQRankSum=-3.741;QD=3.00;ReadPosRankSum=-4.645;VQSLOD=0.3056;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:36:23.30:23,0,788	0/1:14,0:14:32.85:33,0,530	0/1:27,0:8:18.77:19,0,184	0/1:21,0:7:6.04:6,0,72	./.	0/1:7,1:8:7.56:31,0,8	1/1:8,3:10:3.31:88,3,0	1/1:8,0:7:6.43:58,6,0	0/1:17,0:17:0:0,0,0	0/1:31,2:31:99:349,0,221	1/1:18,3:21:2.21:44,2,0	0/0:14,0:13:2.22:0,2,7	0/1:35,0:35:99:163,0,156	1/1:12,0:12:5.89:45,6,0	0/0:33,0:33:25.28:0,25,858	0/1:27,0:27:55.58:56,0,98	0/1:26,0:26:26.09:26,0,871	0/1:14,0:14:99:108,0,182	0/1:7,0:7:13.76:14,0,79	./.	1/1:10,0:10:2.98:22,3,0	0/0:32,1:33:7.18:0,7,50	1/1:11,0:11:2.99:23,3,0	1/1:10,0:10:2.68:24,3,0	0/0:25,0:25:9.49:0,9,99	0/1:13,0:13:34.48:107,0,34	0/1:9,0:8:13.01:14,0,13	./.
chr10	90934960	.	CGT	C	130.03	PASS	AB=0.824;AC=8;AF=0.167;AN=48;BaseQRankSum=2.090;DP=507;FS=11.669;HRun=0;HaplotypeScore=134.1922;InbreedingCoeff=0.2040;MQ=42.67;MQ0=11;MQRankSum=-3.343;QD=1.76;ReadPosRankSum=-4.488;VQSLOD=0.1639;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,2:39:50.67:0,51,769	0/0:17,0:17:23.11:0,23,450	0/0:32,0:5:2.72:0,3,116	0/0:29,0:5:11.99:0,12,169	./.	0/1:4,1:5:0:0,0,0	1/1:8,4:8:3.01:49,3,0	0/1:18,4:14:76.68:77,0,170	0/0:14,1:15:2.96:0,3,19	0/0:30,3:33:24:0,24,662	0/0:18,3:21:29.95:0,30,330	0/1:6,1:6:0:0,0,0	0/0:26,1:27:16.14:0,16,415	0/1:4,3:7:0:0,0,0	0/0:32,0:32:74.31:0,74,804	0/0:27,0:27:57.14:0,57,617	0/0:32,0:33:74.81:0,75,843	0/0:15,1:16:0.23:0,0,275	0/1:5,1:5:33.81:34,0,135	./.	./.	0/0:30,0:30:29.53:0,30,331	./.	0/0:2,3:5:0:0,0,0	0/0:20,0:20:26.04:0,26,312	0/1:11,3:14:74.01:74,0,236	0/0:4,1:5:3.01:0,3,41	0/0:6,0:6:4.31:0,4,41
chr10	90934974	.	CAT	C	44.23	PASS	AB=0.927;AC=7;AF=0.159;AN=44;BaseQRankSum=3.546;DP=534;FS=6.773;HRun=0;HaplotypeScore=124.7460;InbreedingCoeff=0.2232;MQ=42.39;MQ0=19;MQRankSum=-5.010;QD=0.57;ReadPosRankSum=-3.658;VQSLOD=0.8911;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,1:43:89.95:0,90,1624	0/0:14,0:14:39.09:0,39,734	0/0:27,0:8:20.41:0,20,298	0/0:26,0:5:5.20:0,5,145	./.	./.	0/1:12,1:8:0:0,0,0	0/1:31,2:20:73.64:74,0,173	0/0:15,0:15:0.89:0,1,2	0/0:34,0:33:92.98:0,93,1718	0/0:17,0:16:42.14:0,42,809	1/1:6,0:6:3.01:37,3,0	0/0:34,0:34:63.17:0,63,1147	0/1:6,1:7:0:0,0,0	0/0:32,0:32:84.05:0,84,1555	0/0:26,0:26:66.22:0,66,1232	0/0:34,0:35:86.80:0,87,1519	0/0:19,0:19:0.84:0,1,633	0/1:7,1:7:24.68:25,0,288	./.	./.	0/0:26,1:27:45.12:0,45,840	./.	./.	0/0:22,0:22:48.16:0,48,863	0/0:15,1:15:9.86:0,10,380	0/0:5,0:5:3.01:0,3,58	0/1:10,0:10:10.66:11,0,28
chr10	90934988	.	T	TAC	285.50	PASS	AB=0.918;AC=9;AF=0.214;AN=42;BaseQRankSum=5.471;DP=547;FS=1.123;HRun=0;HaplotypeScore=118.6826;InbreedingCoeff=0.2944;MQ=43.39;MQ0=22;MQRankSum=-5.820;QD=3.40;ReadPosRankSum=-1.464;VQSLOD=1.9397;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:44:90.76:0,91,1216	0/0:15,0:15:42.13:0,42,558	0/0:26,0:12:29.05:0,29,367	0/0:22,0:6:18.05:0,18,231	./.	./.	./.	0/0:35,0:17:6.02:0,6,74	1/1:14,2:16:3.01:46,3,0	0/0:41,0:40:99:0,105,1411	0/0:20,0:19:51.17:0,51,699	1/1:6,0:6:0.40:1,0,0	0/0:33,0:33:63.21:0,63,851	0/1:8,0:8:0:0,0,0	0/0:34,0:34:87.20:0,87,1158	0/0:26,0:26:66.22:0,66,906	0/0:29,1:31:58.92:0,59,794	0/0:21,0:21:49.75:0,50,641	0/1:7,0:7:49.47:78,0,49	0/1:13,1:13:0:0,0,0	./.	0/0:25,0:25:54.12:0,54,724	./.	./.	0/0:21,0:21:51.17:0,51,700	0/1:16,1:16:49:243,0,49	./.	0/1:9,6:15:22.80:23,0,66
chr10	90934992	.	CAT	C	197.07	PASS	AB=0.809;AC=10;AF=0.217;AN=46;BaseQRankSum=5.498;DP=561;FS=0.000;HRun=0;HaplotypeScore=117.1250;InbreedingCoeff=0.3759;MQ=43.73;MQ0=25;MQRankSum=-5.963;QD=2.24;ReadPosRankSum=-2.232;VQSLOD=2.0058;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:90.55:0,91,1729	0/0:15,0:15:42.13:0,42,742	0/0:22,0:12:29.14:0,29,506	0/0:21,0:6:17.09:0,17,278	./.	./.	0/1:9,6:9:0:0,0,0	0/0:38,1:17:0.94:0,1,56	1/1:8,9:16:2.37:9,2,0	0/0:44,0:42:99:0,113,2042	0/0:20,0:18:51.17:0,51,967	1/1:5,1:6:2.86:17,3,0	0/0:33,0:34:69.22:0,69,1195	0/1:5,0:6:0:0,0,0	0/0:33,0:33:87.21:0,87,1569	0/0:28,0:28:69.22:0,69,1279	0/0:33,0:33:73.93:0,74,1212	0/0:23,0:22:57.15:0,57,1009	0/1:4,2:6:66.19:78,0,66	0/0:9,6:13:0:0,0,0	1/1:16,5:14:0.47:1,0,0	0/0:25,0:25:54.16:0,54,1021	./.	./.	0/0:23,0:23:60.16:0,60,1008	0/1:12,5:16:63.36:194,0,63	./.	0/0:15,0:15:1.04:0,1,111
chr10	90934994	.	T	TAC	208.83	PASS	AB=0.946;AC=11;AF=0.275;AN=40;BaseQRankSum=6.015;DP=554;FS=3.381;HRun=0;HaplotypeScore=117.8147;InbreedingCoeff=0.1830;MQ=43.93;MQ0=24;MQRankSum=-6.429;QD=1.29;ReadPosRankSum=-3.295;VQSLOD=1.5276;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:87.76:0,88,1244	0/0:14,0:14:33.11:0,33,473	0/1:22,0:11:15.28:15,0,337	0/1:20,0:6:4.95:5,0,197	./.	./.	./.	0/1:39,0:17:22.59:67,0,23	1/1:15,2:16:3.01:44,3,0	0/0:45,0:43:99:0,114,1594	0/0:20,0:18:51.17:0,51,729	1/1:5,0:5:2.99:26,3,0	0/0:33,0:33:66.22:0,66,935	./.	0/0:32,0:32:81.27:0,81,1150	0/0:27,0:27:69.21:0,69,968	0/0:33,0:33:71.32:0,71,971	0/0:24,0:23:57.19:0,57,805	0/1:4,0:4:1.07:1,0,54	./.	0/1:20,1:14:0:0,0,0	0/0:24,0:24:57.08:0,57,796	./.	./.	0/0:24,0:24:63.18:0,63,861	0/1:18,1:18:15.58:164,0,16	./.	0/1:9,6:15:0.32:0,0,86
chr10	90935000	.	CATACAT	C	327.88	PASS	AB=0.959;AC=12;AF=0.240;AN=50;BaseQRankSum=7.613;DP=579;FS=0.803;HRun=0;HaplotypeScore=148.3648;InbreedingCoeff=0.4529;MQ=44.20;MQ0=25;MQRankSum=-7.154;QD=2.52;ReadPosRankSum=-2.576;VQSLOD=1.8725;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:83.70:0,84,3001	0/0:13,0:13:36.12:0,36,1265	0/0:20,0:10:26.98:0,27,751	0/0:17,0:7:21.06:0,21,507	./.	0/0:3,1:4:0:0,0,0	0/1:13,2:9:0:0,0,0	0/1:40,1:16:31.41:31,0,80	1/1:11,6:16:2.82:15,3,0	0/0:49,0:45:99:0,129,3832	0/0:21,0:20:54.18:0,54,1855	1/1:7,1:8:2.74:40,3,0	0/0:35,0:35:66.21:0,66,2039	0/0:9,0:9:0:0,0,0	0/0:34,0:34:87.28:0,87,2662	0/0:28,0:28:72.25:0,72,2260	0/0:33,0:33:84.15:0,84,2405	0/0:26,0:25:63.21:0,63,1962	0/1:5,0:4:13.38:13,0,64	0/0:17,3:17:0:0,0,0	0/0:20,0:15:0:0,0,0	0/0:22,0:22:60.06:0,60,1947	./.	./.	0/0:24,0:24:69.19:0,69,1887	1/1:14,4:17:25.85:320,26,0	1/1:8,2:10:2.35:18,2,0	0/1:15,0:15:23.23:23,0,124
chr10	90935004	.	CAT	C	169.71	PASS	AB=0.974;AC=9;AF=0.180;AN=50;BaseQRankSum=7.911;DP=595;FS=5.287;HRun=0;HaplotypeScore=120.4882;InbreedingCoeff=0.3661;MQ=43.92;MQ0=29;MQRankSum=-7.274;QD=1.26;ReadPosRankSum=-2.207;VQSLOD=1.0078;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:93.47:0,93,1677	0/0:13,0:13:36.12:0,36,677	0/0:18,0:10:26.04:0,26,387	0/0:18,0:6:17.55:0,18,278	./.	0/0:4,0:4:0:0,0,0	0/1:15,0:9:0:0,0,0	0/1:40,7:18:39.01:39,0,43	0/0:14,1:14:2.25:0,2,11	0/0:48,0:44:99:0,132,2322	0/0:20,0:19:54.18:0,54,1006	1/1:5,2:7:3.01:44,3,0	0/0:31,0:31:63.19:0,63,1125	0/0:12,0:12:0:0,0,0	0/0:34,0:34:90.27:0,90,1530	0/0:29,0:29:72.18:0,72,1280	0/0:34,0:34:82.39:0,82,1382	0/0:29,0:28:70.93:0,71,1237	0/0:6,0:3:5.84:0,6,70	0/0:24,0:21:0:0,0,0	1/1:17,3:14:0.47:1,0,0	0/0:24,0:24:66.20:0,66,1167	./.	./.	0/0:22,0:22:60.16:0,60,1020	0/1:16,0:15:3.10:154,0,3	0/1:15,0:15:1.15:21,0,1	0/1:15,0:15:22.21:22,0,131
chr10	90935012	.	CAT	C	486.43	PASS	AB=0.877;AC=10;AF=0.200;AN=50;BaseQRankSum=7.988;DP=651;FS=0.000;HRun=0;HaplotypeScore=112.6601;InbreedingCoeff=0.4044;MQ=42.23;MQ0=34;MQRankSum=-7.688;QD=2.95;ReadPosRankSum=-1.646;VQSLOD=2.1140;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:87.55:0,88,1733	0/0:13,0:13:36.12:0,36,694	0/0:14,0:7:21.03:0,21,365	0/0:17,0:5:15.05:0,15,259	./.	0/0:4,2:6:0:0,0,0	0/1:11,0:5:0:0,0,0	1/1:63,2:34:1.92:67,2,0	0/0:22,0:21:2.51:0,3,37	0/0:55,0:49:99:0,144,2485	0/0:24,0:23:60.21:0,60,1140	1/1:9,3:12:2.60:10,3,0	0/0:28,0:28:63.20:0,63,1149	0/0:10,6:16:0:0,0,0	0/0:36,0:36:99:0,99,1702	0/0:31,0:31:66.21:0,66,1198	0/0:32,0:32:78.70:0,79,1467	0/0:29,1:29:38.23:0,38,1292	0/0:5,0:2:5.87:0,6,36	0/0:20,6:24:0:0,0,0	1/1:21,0:15:0.47:1,0,0	0/0:29,0:28:69.21:0,69,1251	./.	./.	0/0:18,0:18:54.17:0,54,1008	0/1:15,5:17:7.82:233,0,8	0/1:16,2:18:2.66:125,0,3	0/1:13,4:16:37.79:161,0,38
chr10	90935014	.	T	TAC	81.63	PASS	AB=0.934;AC=9;AF=0.196;AN=46;BaseQRankSum=6.294;DP=661;FS=6.724;HRun=0;HaplotypeScore=114.0548;InbreedingCoeff=0.2339;MQ=42.15;MQ0=36;MQRankSum=-6.216;QD=0.46;ReadPosRankSum=-2.795;VQSLOD=1.1545;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:84.64:0,85,1314	0/0:13,0:13:36.12:0,36,516	0/0:15,0:7:21.06:0,21,272	0/0:18,0:5:15.04:0,15,187	./.	0/1:6,0:6:0:0,0,0	./.	0/1:67,0:35:26.38:72,0,26	0/0:21,1:21:2.74:0,3,35	0/0:55,0:49:99:0,130,1810	0/0:24,0:23:60.20:0,60,850	1/1:11,1:12:3:26,3,0	0/0:27,0:27:60.20:0,60,849	0/1:12,4:16:0:0,0,0	0/0:37,0:37:96.30:0,96,1331	0/0:30,0:30:57.19:0,57,813	0/0:33,0:33:77.83:0,78,1078	0/0:31,0:30:70.06:0,70,947	0/0:7,0:3:3.22:0,3,13	./.	0/1:21,0:15:0:0,0,0	0/0:28,0:27:66.21:0,66,924	./.	./.	0/0:19,0:19:57.16:0,57,780	0/1:20,1:18:17.85:18,0,73	0/1:13,5:18:12.80:68,0,13	0/1:17,0:16:2.40:2,0,92
chr10	90935018	.	TAC	T	261.45	PASS	AB=0.952;AC=9;AF=0.196;AN=46;BaseQRankSum=6.456;DP=664;FS=3.163;HRun=0;HaplotypeScore=112.6747;InbreedingCoeff=0.3552;MQ=42.12;MQ0=32;MQRankSum=-6.342;QD=1.65;ReadPosRankSum=-1.077;VQSLOD=2.2789;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,104,1706	0/0:14,0:14:37.37:0,37,620	0/0:14,0:7:3.04:0,3,157	0/0:16,0:5:8.94:0,9,94	./.	0/0:6,0:6:0:0,0,0	./.	1/1:57,9:36:20.82:277,21,0	0/0:18,2:19:2.44:0,2,17	0/0:53,0:47:99:0,119,2281	0/0:24,0:23:60.21:0,60,1050	1/1:12,0:12:2.92:17,3,0	0/0:27,0:27:63.22:0,63,1109	0/0:17,0:17:0:0,0,0	0/0:35,0:35:90.29:0,90,1554	0/0:28,0:28:48.16:0,48,838	0/0:32,0:32:79.49:0,79,1346	0/0:31,0:30:54.47:0,54,1103	0/0:7,0:2:6.02:0,6,83	./.	1/1:19,1:14:0.47:1,0,0	0/0:30,0:29:75.26:0,75,1289	./.	./.	0/0:19,0:19:54.19:0,54,958	0/1:21,1:19:30.86:31,0,96	0/1:16,2:18:38.65:46,0,39	0/1:20,0:19:10.19:10,0,150
chr10	90935022	.	CACAT	C	483.46	PASS	AB=0.977;AC=10;AF=0.200;AN=50;BaseQRankSum=7.300;DP=701;FS=5.686;HRun=0;HaplotypeScore=131.0668;InbreedingCoeff=0.3782;MQ=41.66;MQ0=37;MQRankSum=-7.373;QD=2.39;ReadPosRankSum=-2.689;VQSLOD=1.3440;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,100,2350	0/0:15,0:15:40.32:0,40,855	0/0:14,0:7:8.01:0,8,101	0/0:15,0:5:5.91:0,6,88	./.	0/0:7,0:7:0:0,0,0	0/1:11,0:6:0:0,0,0	1/1:73,0:40:17.86:278,18,0	0/1:19,1:18:0.12:0,0,0	0/0:57,0:50:99:0,147,3376	0/0:25,0:24:63.18:0,63,1447	1/1:13,0:13:2.88:38,3,0	0/0:27,0:27:63.22:0,63,1615	0/0:18,1:19:0:0,0,0	0/0:33,0:33:87.28:0,87,2177	0/0:26,0:26:48.14:0,48,1042	0/0:34,0:34:79.39:0,79,1954	0/0:34,0:33:71.53:0,72,1684	0/0:7,0:2:3.48:0,3,52	0/0:30,2:30:0:0,0,0	0/1:20,0:14:0:0,0,0	0/0:31,0:29:75.26:0,75,1835	./.	./.	0/0:19,0:19:57.18:0,57,1436	0/1:20,1:19:99:135,0,105	0/1:19,1:20:59.63:107,0,60	0/1:23,0:22:45.04:45,0,164
chr10	90935030	.	CAT	C	300.42	PASS	AB=0.926;AC=11;AF=0.229;AN=48;BaseQRankSum=6.601;DP=732;FS=27.807;HRun=0;HaplotypeScore=111.1668;InbreedingCoeff=0.1167;MQ=40.67;MQ0=37;MQRankSum=-6.743;QD=1.25;ReadPosRankSum=-3.309;VQSLOD=-0.1909;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:99:0,100,1868	0/1:12,1:13:3.32:3,0,619	0/0:6,0:1:3.01:0,3,57	0/0:12,0:2:3.01:0,3,58	./.	0/0:9,0:8:0:0,0,0	./.	0/1:71,9:46:61.50:283,0,62	0/1:15,4:17:0.33:0,0,0	0/0:58,0:50:99:0,142,2578	0/0:21,0:21:51.17:0,51,976	1/1:15,0:14:2.98:22,3,0	0/0:26,0:26:63.21:0,63,1188	0/0:19,0:19:0:0,0,0	0/0:32,0:32:87.30:0,87,1634	0/0:27,0:27:39.12:0,39,697	0/0:32,0:32:80.57:0,81,1510	0/0:35,0:34:42.84:0,43,1379	0/1:15,1:8:17.84:18,0,73	0/0:38,1:37:0:0,0,0	1/1:24,2:19:0.47:1,0,0	0/0:31,0:29:75.26:0,75,1421	./.	./.	0/0:20,0:20:60.19:0,60,1116	0/1:21,1:19:31.70:32,0,98	0/1:21,2:22:29.11:29,0,58	0/1:19,0:18:28.36:28,0,88
chr10	90935036	.	TAC	T	1039.17	PASS	AB=0.818;AC=13;AF=0.271;AN=48;BaseQRankSum=8.803;DP=762;FS=7.963;HRun=0;HaplotypeScore=115.0209;InbreedingCoeff=0.4143;MQ=40.27;MQ0=39;MQRankSum=-7.295;QD=3.82;ReadPosRankSum=-3.087;VQSLOD=1.2352;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:91.79:0,92,1519	0/0:15,0:14:26.03:0,26,513	./.	0/0:10,0:1:3.01:0,3,45	1/1:13,15:28:3.01:39,3,0	0/0:7,3:9:0:0,0,0	./.	0/1:87,0:44:38.10:68,0,38	0/1:17,4:19:0:0,0,0	0/0:60,0:49:99:0,144,2287	0/0:24,0:23:48.14:0,48,752	0/1:12,7:16:3.17:70,0,3	0/0:26,0:26:60.21:0,60,1034	0/0:5,15:20:0:0,0,0	0/0:30,0:30:81.26:0,81,1349	0/0:24,0:24:18.06:0,18,312	0/0:33,0:33:77.77:0,78,1267	0/0:34,0:33:81.09:0,81,1317	0/1:12,2:8:58.90:59,0,97	0/0:14,27:40:0:0,0,0	./.	0/0:31,0:29:60.21:0,60,1032	1/1:11,24:33:3.01:40,3,0	./.	0/0:20,0:20:57.20:0,57,987	1/1:13,12:22:7.22:420,7,0	1/1:9,14:22:26.93:315,27,0	0/1:9,11:19:99:167,0,115
chr10	90935038	.	C	CAT	499.43	PASS	AB=0.971;AC=13;AF=0.260;AN=50;BaseQRankSum=8.021;DP=781;FS=20.490;HRun=0;HaplotypeScore=124.6874;InbreedingCoeff=0.2336;MQ=39.69;MQ0=40;MQRankSum=-6.662;QD=1.78;ReadPosRankSum=-3.387;VQSLOD=-0.6807;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:96.72:0,97,1397	0/0:15,0:14:37.21:0,37,509	./.	0/0:10,0:1:3.01:0,3,43	1/1:32,1:33:2.85:38,3,0	0/1:11,1:11:0:0,0,0	./.	0/0:88,0:44:33.80:0,34,246	0/1:23,0:21:0.27:0,0,0	0/0:61,0:50:99:0,144,2061	0/0:21,0:20:51.12:0,51,712	0/1:21,0:18:12.62:70,0,13	0/0:29,0:29:60.20:0,60,916	0/1:21,0:21:0.11:0,0,0	0/0:30,0:30:81.26:0,81,1215	0/0:22,0:22:21.05:0,21,299	0/0:34,0:34:85.97:0,86,1184	0/0:34,0:33:81.22:0,81,1190	0/1:13,0:8:58.26:58,0,112	0/1:39,3:41:0:0,0,0	0/0:30,0:23:0:0,0,1	0/0:29,0:27:66.18:0,66,964	1/1:36,3:37:3.01:40,3,0	./.	0/0:19,0:19:57.19:0,57,871	0/1:28,1:25:41.78:209,0,42	0/1:23,1:23:13.31:182,0,13	0/1:22,1:22:25.03:25,0,117
chr10	90935060	.	CAT	C	322.70	PASS	AB=0.993;AC=11;AF=0.220;AN=50;BaseQRankSum=10.787;DP=872;FS=13.828;HRun=0;HaplotypeScore=151.8465;InbreedingCoeff=0.3274;MQ=40.83;MQ0=35;MQRankSum=-12.039;QD=1.14;ReadPosRankSum=-1.935;VQSLOD=1.5295;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:99:0,107,1907	0/1:15,0:14:6.31:6,0,599	./.	./.	0/0:44,0:44:0.91:0,1,6	0/0:16,0:15:1.25:0,1,3	./.	0/1:63,0:31:30.07:90,0,30	0/1:31,0:29:0.43:10,0,0	0/0:67,0:58:99:0,166,2967	0/0:19,0:19:47.96:0,48,814	0/0:36,0:33:0.86:0,1,14	0/0:33,0:33:69.81:0,70,1247	0/1:25,0:25:0:0,0,0	0/0:35,0:34:87.30:0,87,1664	0/0:22,1:23:26.87:0,27,437	0/0:35,1:36:89.93:0,90,1651	0/0:27,1:27:69.21:0,69,1248	1/1:15,0:12:10.66:68,11,0	0/0:54,0:53:9.34:0,9,24	0/1:37,1:29:0:0,0,0	0/0:26,0:24:63.22:0,63,1192	0/0:54,0:52:8.66:0,9,22	0/0:13,0:11:0.89:0,1,2	0/0:24,0:24:69.24:0,69,1318	0/1:44,1:38:62.87:146,0,63	1/1:26,0:25:19.08:67,19,0	0/1:25,0:25:19.03:67,0,19
chr10	90935064	.	CAT	C	4775.65	PASS	AB=0.576;AC=26;AF=0.500;AN=52;BaseQRankSum=12.247;DP=864;FS=44.317;HRun=0;HaplotypeScore=136.1869;InbreedingCoeff=0.7492;MQ=40.95;MQ0=34;MQRankSum=-6.865;QD=9.31;ReadPosRankSum=-2.238;VQSLOD=2.5692;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:99:0,101,1793	0/0:15,0:14:27.87:0,28,629	./.	./.	1/1:4,40:44:24.08:367,24,0	1/1:4,13:16:2.75:46,3,0	1/1:13,20:26:9.01:110,9,0	1/1:42,15:26:11:440,11,0	1/1:11,20:29:14.79:195,15,0	0/0:63,0:55:99:0,160,2916	0/0:19,0:19:48.13:0,48,852	1/1:8,28:33:36.05:512,36,0	0/0:32,0:32:72.06:0,72,1097	0/1:4,21:25:0:0,0,0	0/0:36,0:35:87.27:0,87,1613	0/0:23,0:23:27.08:0,27,451	0/0:38,0:38:99:0,100,1658	0/0:26,0:25:66.22:0,66,1253	1/1:4,9:11:24.08:354,24,0	1/1:6,48:53:20.94:321,21,0	0/1:14,23:28:0:0,0,0	0/0:26,0:24:60.18:0,60,1109	1/1:4,50:52:21.07:321,21,0	1/1:2,12:12:3.01:46,3,0	0/0:24,0:24:72.25:0,72,1362	0/1:14,32:39:2.77:1219,0,3	1/1:4,22:25:33.57:444,34,0	0/1:5,20:25:39.37:399,0,39
chr10	90935126	.	T	TACACAC	2276.93	PASS	AB=0.981;AC=26;AF=0.481;AN=54;BaseQRankSum=6.188;DP=683;FS=57.227;HRun=0;HaplotypeScore=172.2058;InbreedingCoeff=0.7206;MQ=42.39;MQ0=17;MQRankSum=-6.343;QD=5.96;ReadPosRankSum=-3.356;VQSLOD=0.0870;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:58.03:0,58,1376	0/0:12,0:12:5.94:0,6,291	0/0:6,0:1:3.01:0,3,62	0/0:7,0:1:3.01:0,3,59	1/1:31,0:31:3.01:50,3,0	./.	1/1:34,0:29:9.48:112,9,0	1/1:60,0:32:24:355,24,0	1/1:24,0:23:2.98:47,3,0	0/0:44,0:42:60.13:0,60,1208	0/0:15,0:15:20.08:0,20,349	1/1:29,0:28:18.05:336,18,0	0/0:19,0:19:17.70:0,18,274	0/1:11,0:10:0:0,0,0	0/0:23,0:23:42.10:0,42,727	0/0:10,0:10:6.02:0,6,112	0/0:46,0:47:99:0,109,2100	0/0:16,0:19:39.57:0,40,728	1/1:16,0:11:17.93:220,18,0	1/1:34,0:34:5.98:146,6,0	0/1:25,1:21:0:0,0,0	0/0:25,0:25:48.12:0,48,953	1/1:34,1:35:11.86:168,12,0	1/1:13,0:13:3.43:74,3,0	0/0:18,0:18:35.64:0,36,642	1/1:35,1:35:43.69:874,44,0	1/1:10,0:9:0.94:2,1,0	1/1:22,0:21:4.61:74,5,0
chr10	90935157	.	GCCCGCACA	G	1801.46	PASS	AB=0.771;AC=17;AF=0.354;AN=48;BaseQRankSum=7.176;DP=445;FS=33.428;HRun=0;HaplotypeScore=143.9602;InbreedingCoeff=0.7182;MQ=59.10;MQ0=4;MQRankSum=-9.596;QD=14.65;ReadPosRankSum=-2.729;VQSLOD=0.8639;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,4511	0/0:17,0:17:51.18:0,51,2015	0/0:8,0:6:17.81:0,18,238	0/0:14,0:7:8.08:0,8,226	./.	./.	1/1:11,4:14:12:239,12,0	1/1:8,2:10:25.53:289,26,0	./.	0/0:31,0:31:82.63:0,83,2285	0/0:15,0:15:33.57:0,34,1075	1/1:9,0:9:3.01:50,3,0	0/0:14,0:14:42.08:0,42,1157	0/0:3,14:16:0:0,0,0	0/0:15,0:15:45.09:0,45,1361	0/0:3,0:3:9.03:0,9,318	0/0:47,0:47:99:0,135,5128	0/0:27,0:27:75.24:0,75,2425	1/1:5,13:18:47.52:580,48,0	1/1:7,5:12:2.95:47,3,0	0/1:11,3:14:0:1,0,0	0/0:25,0:25:66.21:0,66,2144	./.	0/1:4,9:13:0.44:0,0,0	0/0:15,0:15:42.11:0,42,1183	0/1:16,2:18:12.42:434,0,12	1/1:6,0:5:9.02:119,9,0	1/1:7,0:7:15.03:206,15,0
chr10	90935161	.	GCACA	G	893.75	PASS	AB=0.889;AC=24;AF=0.444;AN=54;BaseQRankSum=7.164;DP=461;FS=13.410;HRun=0;HaplotypeScore=127.1504;InbreedingCoeff=0.6898;MQ=60.05;MQ0=4;MQRankSum=-7.247;QD=5.26;ReadPosRankSum=-3.844;VQSLOD=0.4720;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,2995	0/0:17,0:17:51.18:0,51,1340	0/0:8,0:6:17.81:0,18,238	0/0:14,0:8:8.80:0,9,162	1/1:13,0:13:2.94:18,3,0	1/1:10,0:10:2.97:20,3,0	1/1:19,1:19:18.18:160,18,0	1/1:12,0:12:9.81:125,10,0	./.	0/0:32,0:32:76.31:0,76,1181	0/0:15,0:15:33.53:0,34,549	1/1:8,1:9:3:25,3,0	0/0:14,0:14:39.10:0,39,627	0/1:17,0:16:0:0,0,0	0/0:18,0:18:48.14:0,48,1037	0/0:4,0:4:10.85:0,11,177	0/0:43,0:43:99:0,126,3322	0/0:29,0:29:81.20:0,81,1393	1/1:18,0:17:28.49:288,28,0	1/1:14,0:14:2.93:22,3,0	1/1:14,0:14:2.97:21,3,0	0/0:25,0:25:63.18:0,63,1116	1/1:13,0:12:2.97:20,3,0	0/0:12,0:12:0.47:0,0,1	0/0:15,0:15:37.65:0,38,610	1/1:15,0:16:2.22:234,2,0	1/1:7,0:6:11.64:67,12,0	0/1:5,2:7:2.80:73,0,3
chr10	90935538	.	G	GAAC	4585.98	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-2.146;DP=528;FS=4.726;HRun=0;HaplotypeScore=104.4678;InbreedingCoeff=0.9897;MQ=92.04;MQ0=2;MQRankSum=-3.744;QD=17.91;ReadPosRankSum=-1.259;VQSLOD=4.1722;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:94.24:0,94,1260	0/0:13,0:13:36.06:0,36,481	0/0:44,0:27:25.71:0,26,380	0/0:50,0:33:42.16:0,42,359	1/1:9,0:9:23.63:186,24,0	1/1:10,1:11:25.52:251,26,0	1/1:17,2:19:41.64:451,42,0	1/1:26,0:26:57.68:544,58,0	1/1:14,1:16:30.80:321,31,0	0/0:14,0:14:36.10:0,36,444	0/0:9,0:9:27.03:0,27,316	1/1:24,1:27:20.57:424,21,0	0/0:8,0:8:21.06:0,21,253	1/1:10,0:10:15:135,15,0	0/0:13,0:13:29.67:0,30,333	0/0:14,0:14:24.29:0,24,366	0/0:26,0:26:59.85:0,60,858	0/0:18,0:18:39.08:0,39,460	1/1:15,1:16:41.88:384,42,0	1/1:13,2:15:31.47:300,31,0	1/1:11,0:11:14.60:120,15,0	0/0:7,0:7:15.05:0,15,189	1/1:18,1:17:29.22:277,29,0	1/1:14,0:15:27.01:243,27,0	0/0:15,0:15:33.06:0,33,398	1/1:23,0:22:50:422,50,0	1/1:26,1:27:22.47:313,22,0	1/1:11,1:12:23.21:215,23,0
chr10	90935541	.	CA	C	764.51	PASS	AB=0.813;AC=13;AF=0.232;AN=56;BaseQRankSum=-5.777;DP=569;FS=1.600;HRun=15;HaplotypeScore=108.5003;InbreedingCoeff=0.3211;MQ=89.85;MQ0=3;MQRankSum=0.869;QD=5.42;ReadPosRankSum=0.962;VQSLOD=2.7960;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,5:45:35.91:0,36,611	0/1:12,2:14:23.44:23,0,157	0/0:48,1:29:8.84:0,9,121	0/0:54,0:34:30.81:0,31,186	0/1:14,0:15:16.95:17,0,63	0/0:12,0:13:19.43:0,19,90	0/0:21,0:21:42.21:0,42,207	0/0:27,0:27:46.22:0,46,232	0/0:15,0:17:33.92:0,34,166	1/1:5,10:16:13.68:170,14,0	0/1:4,6:10:5.73:95,0,6	0/0:26,0:28:28.96:0,29,217	1/1:2,4:8:18.84:106,19,0	0/0:10,0:10:13.94:0,14,64	0/0:13,0:14:11.78:0,12,177	0/1:11,3:14:25.33:104,0,25	0/0:26,2:28:27.19:0,27,447	0/1:16,6:22:12.10:159,0,12	0/1:18,0:18:14.43:14,0,78	0/0:15,0:15:25.15:0,25,118	0/0:8,0:8:13.87:0,14,63	1/1:4,2:6:14.70:94,15,0	0/0:19,0:17:27.43:0,27,118	0/0:14,0:14:25.01:0,25,115	0/1:5,13:18:10.21:151,0,10	0/0:24,0:23:36.57:0,37,176	0/0:26,0:28:39.07:0,39,182	0/0:13,0:13:22.19:0,22,101
chr10	90935542	.	A	AAC	6409.42	PASS	AB=0.612;AC=29;AF=0.518;AN=56;BaseQRankSum=-7.172;DP=597;FS=8.008;HRun=0;HaplotypeScore=113.3806;InbreedingCoeff=0.8918;MQ=88.58;MQ0=3;MQRankSum=-0.668;QD=21.95;ReadPosRankSum=0.385;VQSLOD=4.9560;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,101,1197	0/0:13,0:13:37.31:0,37,456	0/0:50,0:29:50.12:0,50,481	0/0:55,0:35:40.10:0,40,394	1/1:7,9:17:10.08:292,10,0	1/1:10,3:13:29.60:303,30,0	1/1:8,15:24:22.39:560,22,0	0/1:11,19:30:9.42:622,0,9	1/1:11,6:17:36.70:473,37,0	0/0:19,0:19:5.73:0,6,332	0/0:12,0:12:27:0,27,261	1/1:13,14:28:5.86:484,6,0	0/0:10,0:10:21.04:0,21,207	1/1:3,7:11:17.98:250,18,0	0/0:13,0:13:33.30:0,33,353	0/0:13,0:13:31.48:0,31,342	0/0:29,0:29:75.03:0,75,914	0/0:21,0:21:23.02:0,23,375	1/1:6,16:22:56.38:622,56,0	1/1:4,10:15:32.75:369,33,0	1/1:3,6:10:14.88:202,15,0	0/0:6,0:6:15.03:0,15,145	1/1:8,11:19:32.75:383,33,0	1/1:2,13:15:26.93:381,27,0	0/0:19,0:19:36.01:0,36,337	1/1:7,17:24:56.03:705,56,0	1/1:12,19:31:34.92:466,35,0	1/1:3,10:13:23.86:296,24,0
chr10	90935543	.	A	AC	2642.91	PASS	AB=0.959;AC=21;AF=0.375;AN=56;BaseQRankSum=-0.596;DP=599;FS=35.062;HRun=0;HaplotypeScore=117.2555;InbreedingCoeff=0.3804;MQ=89.42;MQ0=3;MQRankSum=-1.135;QD=9.24;ReadPosRankSum=5.275;VQSLOD=1.6509;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,106,1136	0/0:13,0:13:37.87:0,38,422	0/0:52,0:30:65.77:0,66,501	0/0:57,0:36:31.50:0,32,362	0/1:19,0:19:46.71:107,0,47	0/1:13,1:14:26.05:176,0,26	0/1:21,1:22:2.26:229,0,2	0/1:31,0:31:57.32:290,0,57	0/1:17,0:17:7.97:174,0,8	0/0:19,0:19:48.90:0,49,405	0/0:12,0:12:29.96:0,30,265	0/1:26,2:28:78.26:162,0,78	0/0:10,0:10:20.96:0,21,176	1/1:10,1:11:9.21:98,9,0	0/0:13,0:13:27.17:0,27,330	0/0:14,0:14:39:0,39,368	0/0:31,0:31:83.50:0,84,910	0/0:21,0:21:55.25:0,55,455	0/1:20,0:20:8.91:216,0,9	1/1:14,1:15:27.73:194,28,0	0/1:7,1:8:4.59:94,0,5	0/0:7,0:7:17.98:0,18,154	1/1:16,4:18:5.08:221,5,0	1/1:14,0:14:23.98:150,24,0	0/0:19,0:19:41.96:0,42,371	1/1:22,0:21:25.56:270,26,0	0/1:30,3:33:4.79:270,0,5	1/1:10,2:12:23.73:184,24,0
chr10	90935852	.	TACACACAC	T	2436.66	PASS	AB=1.000;AC=21;AF=0.438;AN=48;BaseQRankSum=4.929;DP=422;FS=6.756;HRun=0;HaplotypeScore=119.9147;InbreedingCoeff=0.7647;MQ=66.43;MQ0=7;MQRankSum=-4.184;QD=14.33;ReadPosRankSum=0.446;VQSLOD=2.2446;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:29.77:0,30,918	0/0:11,0:11:3.90:0,4,194	0/0:28,0:21:1.82:0,2,5	0/0:27,0:17:3.01:0,3,43	1/1:12,1:14:14.73:243,15,0	1/1:11,3:15:9.03:207,9,0	1/1:23,0:21:2.96:20,3,0	0/1:18,0:15:0:0,0,0	1/1:15,7:21:21.54:522,22,0	0/0:16,0:16:27.09:0,27,911	0/0:13,0:13:15.05:0,15,411	./.	0/0:11,0:12:17.08:0,17,474	./.	0/0:10,0:10:19.51:0,20,777	0/0:7,0:7:12.04:0,12,377	0/0:24,0:24:24.06:0,24,706	0/0:17,0:18:27.09:0,27,707	1/1:13,1:14:5.30:157,5,0	1/1:12,4:16:12.04:297,12,0	./.	0/0:6,0:6:3.48:0,3,104	1/1:9,2:12:12.04:245,12,0	1/1:10,1:12:9.03:206,9,0	0/0:15,0:15:12.04:0,12,365	1/1:6,3:10:17.89:428,18,0	1/1:11,2:13:12.04:288,12,0	./.
chr10	90935885	.	A	ACACACACACG	2521.59	PASS	AB=0.920;AC=13;AF=0.232;AN=56;BaseQRankSum=-5.849;DP=420;FS=11.152;HRun=0;HaplotypeScore=148.2980;InbreedingCoeff=0.6555;MQ=39.09;MQ0=26;MQRankSum=0.133;QD=23.35;ReadPosRankSum=0.649;VQSLOD=2.1430;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:21.01:0,21,335	0/0:5,0:7:5.04:0,5,98	0/0:25,0:3:3.01:0,3,25	0/0:23,0:6:5.87:0,6,55	0/0:15,0:15:14.90:0,15,253	0/0:13,0:11:12.04:0,12,285	0/0:20,0:16:14.56:0,15,248	0/0:21,0:15:20.80:0,21,144	0/0:13,0:12:23.88:0,24,532	1/1:15,2:17:22.23:450,22,0	1/1:5,8:14:9.03:392,9,0	0/0:4,0:4:2.98:0,3,21	1/1:10,1:12:17.58:504,18,0	0/0:9,0:9:3.46:0,3,24	0/0:11,0:11:20.93:0,21,592	1/1:10,1:10:20.93:310,21,0	0/0:24,0:23:36.42:0,36,645	0/1:21,2:23:43.22:542,0,43	0/0:16,0:14:31.40:0,31,313	0/0:13,0:13:24.54:0,25,495	0/0:22,0:18:5.71:0,6,74	1/1:4,0:17:4.63:269,5,0	0/0:13,0:11:12.04:0,12,293	0/0:10,0:9:12.03:0,12,233	1/1:13,1:14:9.44:225,9,0	0/0:13,0:13:29.91:0,30,524	0/0:15,0:15:20.96:0,21,364	0/0:5,0:3:2.96:0,3,19
chr10	90935889	.	ACACACACACC	A	2304.52	PASS	AB=0.971;AC=17;AF=0.304;AN=56;BaseQRankSum=4.812;DP=388;FS=23.835;HRun=0;HaplotypeScore=108.5359;InbreedingCoeff=0.3776;MQ=38.83;MQ0=25;MQRankSum=-5.409;QD=15.68;ReadPosRankSum=3.942;VQSLOD=0.7283;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:44.78:0,45,1411	0/1:7,0:6:0.96:1,0,275	0/0:24,0:2:5.79:0,6,36	0/0:22,0:5:11.75:0,12,105	1/1:11,2:13:15.04:281,15,0	1/1:12,0:9:9.03:202,9,0	0/1:16,0:13:32.90:33,0,117	0/1:18,0:14:6.09:6,0,82	1/1:11,0:10:23.95:470,24,0	0/0:19,0:19:57.11:0,57,1464	0/0:13,0:13:21.05:0,21,574	0/0:3,0:3:2.84:0,3,14	0/0:13,0:13:22.83:0,23,640	0/0:8,0:8:5.65:0,6,32	0/0:11,0:11:24.05:0,24,1060	0/0:11,0:10:27.05:0,27,639	0/0:23,0:22:42.08:0,42,1183	0/0:24,0:24:58.70:0,59,1164	0/1:14,1:13:40.70:161,0,41	0/1:9,0:9:4.77:206,0,5	0/0:15,0:13:2.74:0,3,22	0/0:17,0:17:15.50:0,16,311	1/1:11,0:10:13.91:244,14,0	1/1:7,0:7:9.03:222,9,0	0/0:12,0:12:23.92:0,24,571	0/1:14,0:15:22.49:385,0,22	0/1:11,1:11:3.74:268,0,4	0/0:6,0:4:2.69:0,3,16
chr10	90935899	.	C	CTT	2390.66	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=6.759;DP=487;FS=5.114;HRun=13;HaplotypeScore=121.0837;InbreedingCoeff=0.6992;MQ=40.09;MQ0=25;MQRankSum=-8.034;QD=8.36;ReadPosRankSum=-5.204;VQSLOD=0.3618;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:25.61:0,26,262	0/0:3,0:4:6.86:0,7,55	0/0:26,0:4:1.64:0,2,23	0/0:19,0:4:3.40:0,3,24	1/1:14,8:22:26.51:165,27,0	1/1:13,1:12:25.71:189,26,0	1/1:14,10:22:28.04:273,28,0	1/1:17,3:16:18.99:161,19,0	1/1:13,3:15:33.59:287,34,0	0/0:18,0:18:26.70:0,27,229	0/1:14,0:14:11.50:28,0,12	1/1:6,1:7:11.52:119,12,0	0/0:12,0:13:9.46:0,9,103	1/1:16,1:17:6.98:158,7,0	0/0:16,0:16:4.60:0,5,84	0/0:15,0:15:29.52:0,30,242	0/0:25,0:23:24:0,24,276	0/0:25,0:26:20.16:0,20,274	1/1:16,2:17:28.56:266,29,0	1/1:11,7:17:18.53:185,19,0	1/1:11,3:12:6.44:28,6,0	0/1:19,0:20:36.74:37,0,76	1/1:12,1:12:13.72:81,14,0	1/1:7,6:12:2.71:20,3,0	0/0:11,0:13:17.55:0,18,142	1/1:22,3:24:26.92:265,27,0	1/1:10,6:16:20.52:224,21,0	1/1:11,0:9:14.22:110,14,0
chr10	90936714	.	CCT	C	11532.31	PASS	AB=0.767;AC=44;AF=0.786;AN=56;BaseQRankSum=5.871;DP=534;FS=17.967;HRun=0;HaplotypeScore=79.9921;InbreedingCoeff=0.7948;MQ=75.45;MQ0=3;MQRankSum=-2.509;QD=29.27;ReadPosRankSum=2.234;VQSLOD=4.8428;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:81.28:0,81,1340	0/1:5,0:5:13.58:14,0,111	0/0:29,0:24:45.08:0,45,614	0/0:25,0:23:42.59:0,43,564	1/1:2,28:30:69.21:870,69,0	1/1:2,12:14:27.09:341,27,0	1/1:3,26:29:75.24:946,75,0	1/1:4,15:19:45.09:526,45,0	1/1:0,21:21:57.18:719,57,0	1/1:1,20:21:60.19:757,60,0	0/1:2,14:15:10.99:415,0,11	1/1:2,14:15:36.11:453,36,0	1/1:2,8:11:20.90:241,21,0	1/1:1,11:12:27.09:341,27,0	0/0:21,0:21:57.17:0,57,898	1/1:3,13:16:33.11:416,33,0	0/0:28,0:28:72.19:0,72,1166	1/1:1,13:14:33.11:416,33,0	1/1:2,16:18:48.13:589,48,0	1/1:4,11:14:33.11:416,33,0	1/1:3,19:22:51.16:643,51,0	1/1:2,15:17:45.14:568,45,0	1/1:1,11:12:33.11:416,33,0	1/1:2,19:22:42.13:530,42,0	1/1:1,10:11:21.07:265,21,0	1/1:1,13:14:36.09:439,36,0	1/1:1,29:30:81.26:1022,81,0	1/1:3,6:9:15.05:189,15,0
chr10	90937746	.	CTTT	C	733.68	PASS	AB=0.619;AC=13;AF=0.232;AN=56;BaseQRankSum=5.235;DP=436;FS=6.966;HRun=17;HaplotypeScore=72.8248;InbreedingCoeff=0.7805;MQ=77.83;MQ0=1;MQRankSum=-1.587;QD=9.65;ReadPosRankSum=5.237;VQSLOD=-0.2984;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:30:63.83:0,64,924	0/0:5,0:7:12.02:0,12,151	0/0:30,0:21:19.49:0,19,345	0/0:9,0:7:3.08:0,3,51	0/0:11,0:20:50.60:0,51,636	0/0:15,0:19:51.14:0,51,749	0/0:9,0:20:23.05:0,23,297	0/0:23,0:25:43.63:0,44,539	0/0:10,0:22:27.07:0,27,396	1/1:3,4:8:14.88:141,15,0	1/1:2,6:9:1.69:54,2,0	0/0:2,0:10:12.03:0,12,159	1/1:5,1:8:8.61:65,9,0	0/0:9,0:9:19.58:0,20,252	0/0:16,0:17:36.10:0,36,523	1/1:3,6:12:13.33:125,13,0	0/0:23,0:27:63.15:0,63,888	0/1:5,6:13:10.65:107,0,11	0/0:11,0:17:33.11:0,33,501	0/0:4,0:16:42.14:0,42,631	0/0:6,0:10:12.01:0,12,153	1/1:4,4:9:11.71:110,12,0	0/0:15,0:21:27.02:0,27,360	0/0:5,0:11:15.03:0,15,224	1/1:3,11:17:28.99:306,29,0	0/0:14,0:17:33.09:0,33,492	0/0:10,0:10:21.04:0,21,268	0/0:6,0:12:15.05:0,15,218
chr10	90938525	.	G	GA	804.74	PASS	AB=0.991;AC=17;AF=0.304;AN=56;BaseQRankSum=1.363;DP=549;FS=3.563;HRun=11;HaplotypeScore=104.2384;InbreedingCoeff=0.6520;MQ=71.58;MQ0=6;MQRankSum=0.745;QD=4.68;ReadPosRankSum=-1.776;VQSLOD=1.6694;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:38:5.71:0,6,393	0/1:10,0:10:3.97:4,0,89	0/1:37,1:15:9.19:9,0,20	0/1:22,0:12:4.44:5,0,4	0/0:21,0:21:44.13:0,44,297	0/0:21,0:21:49.90:0,50,336	0/0:17,0:18:43.82:0,44,297	0/0:29,0:28:45.23:0,45,340	0/0:29,0:29:27.37:0,27,198	1/1:20,6:26:32.67:309,33,0	1/1:4,8:12:21.04:208,21,0	0/0:17,0:17:15.14:0,15,82	1/1:7,7:14:3.01:31,3,0	0/0:18,0:18:34.43:0,34,207	0/0:15,0:15:7.83:0,8,148	1/1:5,5:10:5.04:37,5,0	0/0:26,0:26:47.61:0,48,368	1/1:12,4:16:3.60:200,4,0	0/0:13,0:13:20.34:0,20,155	0/0:14,0:14:22.79:0,23,173	0/0:7,0:8:9.63:0,10,57	1/1:6,5:12:9.32:76,9,0	0/0:17,0:17:19.74:0,20,149	0/0:29,0:29:51.96:0,52,331	1/1:11,1:12:13.60:103,14,0	0/0:31,0:32:12.56:0,13,339	0/0:29,0:29:44.99:0,45,330	0/0:3,0:3:4.59:0,5,42
chr10	90938537	.	G	GA	3584.65	PASS	AB=0.909;AC=46;AF=0.821;AN=56;BaseQRankSum=4.017;DP=538;FS=5.400;HRun=14;HaplotypeScore=94.0347;InbreedingCoeff=0.4431;MQ=65.35;MQ0=7;MQRankSum=-1.174;QD=7.61;ReadPosRankSum=-2.344;VQSLOD=2.3539;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:35:18.87:0,19,245	0/1:8,0:8:5:5,0,78	1/1:33,0:10:7.05:32,7,0	0/0:18,0:8:3.10:0,3,28	0/1:21,1:23:9.30:124,0,9	1/1:12,6:21:38.65:309,39,0	1/1:15,3:19:33.25:253,33,0	1/1:16,6:25:13.63:244,14,0	1/1:8,16:29:10.01:192,10,0	1/1:24,0:25:26.73:142,27,0	1/1:14,0:13:10.19:47,10,0	1/1:2,15:18:17.16:138,17,0	1/1:12,0:12:4.63:11,5,0	1/1:9,0:16:17.58:182,18,0	0/0:14,0:14:16.56:0,17,109	1/1:9,0:9:3.11:8,3,0	0/1:28,1:29:50.30:50,0,205	1/1:19,0:18:17.55:67,18,0	1/1:8,1:16:31.73:226,32,0	1/1:15,0:18:29.60:225,30,0	0/1:4,0:6:1.87:6,0,2	1/1:12,0:12:8.08:36,8,0	1/1:4,11:17:15.51:128,16,0	1/1:5,15:27:41.99:369,42,0	1/1:11,0:12:19.35:109,19,0	1/1:15,12:34:41.75:406,42,0	1/1:17,3:22:32.46:247,32,0	1/1:4,0:4:3:26,3,0
chr10	90939137	.	T	TGAC	13081.97	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=8.445;DP=498;FS=60.991;HRun=0;HaplotypeScore=196.0550;InbreedingCoeff=0.9586;MQ=44.37;MQ0=13;MQRankSum=-8.708;QD=45.11;ReadPosRankSum=6.062;VQSLOD=2.9050;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:55.04:0,55,770	0/0:5,0:5:6.48:0,6,70	0/0:37,0:10:22.18:0,22,307	0/0:19,0:8:14.64:0,15,221	1/1:2,16:19:37.37:725,37,0	1/1:2,10:13:20.59:442,21,0	1/1:9,25:34:83.39:1559,83,0	1/1:8,20:28:64.94:1219,65,0	1/1:3,17:20:59.94:1057,60,0	0/0:9,0:9:17.24:0,17,273	0/0:12,0:12:24.55:0,25,422	1/1:0,18:19:51.17:953,51,0	0/0:8,0:8:10.03:0,10,76	1/1:3,16:19:43.49:921,43,0	0/0:16,0:16:30.99:0,31,536	0/0:8,0:8:15.52:0,16,248	0/0:24,0:24:39.59:0,40,639	0/0:25,0:25:46.04:0,46,751	1/1:8,14:21:60.19:1060,60,0	1/1:4,12:15:38.54:696,39,0	1/1:1,7:9:18.06:342,18,0	0/0:4,0:3:9.03:0,9,157	1/1:2,7:10:21.08:431,21,0	1/1:4,19:23:29.79:874,30,0	0/0:10,0:8:15.52:0,16,252	1/1:8,20:27:19.87:1321,20,0	1/1:1,22:23:66.21:1203,66,0	1/1:1,5:5:15.05:281,15,0
chr10	90939143	.	T	TGTTG	9310.11	PASS	AB=0.882;AC=26;AF=0.464;AN=56;BaseQRankSum=11.829;DP=541;FS=5.023;HRun=0;HaplotypeScore=224.7525;InbreedingCoeff=0.6755;MQ=40.93;MQ0=13;MQRankSum=-6.304;QD=30.52;ReadPosRankSum=11.592;VQSLOD=2.8696;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:76.03:0,76,1131	0/0:4,0:4:6.89:0,7,79	0/0:36,0:9:23.87:0,24,307	0/0:19,0:8:17.61:0,18,249	1/1:18,1:19:4.59:478,5,0	1/1:11,1:12:6.71:283,7,0	1/1:31,5:36:75.08:1203,75,0	1/1:25,5:31:23.45:869,23,0	1/1:17,3:20:41.34:816,41,0	0/0:15,0:15:37.80:0,38,453	0/0:13,0:13:34.77:0,35,491	1/1:18,0:18:47.29:649,47,0	0/0:14,0:14:32.90:0,33,335	1/1:15,3:18:15.60:620,16,0	0/0:14,0:14:31.35:0,31,508	0/0:12,0:12:29.85:0,30,298	0/0:21,0:21:51.05:0,51,686	0/0:29,0:29:59.98:0,60,866	1/1:17,10:28:55.48:881,55,0	0/1:15,2:16:0.01:392,0,0	1/1:6,1:7:17.73:238,18,0	0/0:8,0:7:14.90:0,15,150	0/1:10,1:12:68.39:257,0,68	1/1:21,3:24:45.72:697,46,0	0/0:20,0:18:37.43:0,37,454	0/1:24,6:30:22.89:1030,0,23	0/1:24,1:24:26.81:726,0,27	1/1:6,0:5:3.31:172,3,0
chr10	90939144	.	T	TG	1110.49	PASS	AB=0.686;AC=27;AF=0.482;AN=56;BaseQRankSum=15.999;DP=521;FS=2.729;HRun=0;HaplotypeScore=214.9371;InbreedingCoeff=0.7642;MQ=40.92;MQ0=13;MQRankSum=-4.941;QD=3.86;ReadPosRankSum=12.192;VQSLOD=1.6263;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:75.13:0,75,625	0/0:4,0:4:6.44:0,6,51	0/0:36,0:9:22.98:0,23,155	0/0:19,0:8:17.44:0,17,138	1/1:7,10:18:5.48:58,5,0	1/1:5,5:10:15.90:53,16,0	1/1:15,19:34:55.86:198,56,0	1/1:17,11:28:32.33:112,32,0	1/1:6,13:19:39.31:133,39,0	0/0:14,0:14:38.05:0,38,293	0/0:13,0:13:34.17:0,34,287	1/1:5,13:18:29.78:98,30,0	0/0:13,0:13:28.51:0,29,186	1/1:7,10:17:25.81:89,26,0	0/0:14,0:14:31.05:0,31,257	0/0:13,0:13:32.45:0,32,220	0/0:20,0:20:47.20:0,47,364	0/0:28,0:28:59.85:0,60,510	1/1:21,7:27:26.32:118,26,0	0/1:9,7:15:2.68:39,0,3	1/1:2,5:7:12.89:41,13,0	0/0:8,0:7:14.74:0,15,101	0/1:6,5:11:21.63:22,0,33	1/1:8,15:23:30.12:109,30,0	0/0:20,0:18:40.48:0,40,298	0/1:16,14:30:23.86:125,0,24	1/1:6,16:21:23.96:102,24,0	1/1:2,4:5:9.04:30,9,0
chr10	90939146	.	T	TGTTG	10308.96	PASS	AB=0.709;AC=28;AF=0.500;AN=56;BaseQRankSum=14.310;DP=528;FS=2.162;HRun=0;HaplotypeScore=206.6440;InbreedingCoeff=0.8547;MQ=39.15;MQ0=13;MQRankSum=-4.206;QD=35.18;ReadPosRankSum=11.427;VQSLOD=3.9108;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:76.14:0,76,1174	0/0:4,0:4:6.91:0,7,89	0/0:34,0:8:18.19:0,18,261	0/0:19,0:8:10.30:0,10,185	1/1:9,10:19:37.61:540,38,0	1/1:5,5:10:20.99:316,21,0	1/1:15,19:34:88.48:1327,88,0	1/1:17,11:28:65.89:981,66,0	1/1:6,13:19:56.94:884,57,0	0/0:14,0:14:38.96:0,39,504	0/0:13,0:13:35.32:0,35,504	1/1:4,12:17:50.61:711,51,0	0/0:13,0:13:28.90:0,29,367	1/1:7,10:17:47.37:709,47,0	0/0:14,0:14:31.92:0,32,506	0/0:14,0:14:33.06:0,33,420	0/0:20,0:20:48.16:0,48,706	0/0:28,0:28:60.19:0,60,912	1/1:21,7:27:69.62:958,70,0	1/1:9,7:15:36.97:484,37,0	1/1:3,5:8:18.02:257,18,0	0/0:9,0:8:15.05:0,15,213	0/1:8,4:13:11.02:271,0,11	1/1:9,15:24:49.32:746,49,0	0/0:20,0:18:40.57:0,41,526	0/1:18,14:31:3.25:1113,0,3	1/1:6,15:21:47.28:825,47,0	1/1:2,4:5:9.49:188,9,0
chr10	90939840	.	A	AAG	754.52	PASS	AB=0.879;AC=16;AF=0.286;AN=56;BaseQRankSum=4.683;DP=389;FS=7.945;HRun=0;HaplotypeScore=123.2716;InbreedingCoeff=0.2102;MQ=56.14;MQ0=7;MQRankSum=-7.461;QD=5.43;ReadPosRankSum=-2.262;VQSLOD=2.3306;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:33:96.10:0,96,1279	0/0:10,0:10:25.83:0,26,290	0/0:19,0:6:17.85:0,18,164	0/0:13,0:9:11.08:0,11,106	0/1:12,4:16:10.99:95,0,11	0/0:7,1:8:10.33:0,10,27	0/1:6,2:8:1.81:132,0,2	1/1:21,0:20:1.69:56,2,0	0/1:8,0:8:10.86:14,0,11	0/0:21,0:21:63.11:0,63,801	0/0:16,0:16:45.14:0,45,643	0/1:4,1:5:5.15:55,0,5	0/0:9,0:9:20.97:0,21,223	1/1:1,2:3:2.66:92,3,0	0/0:13,0:13:33.05:0,33,442	0/0:11,0:11:33.07:0,33,445	0/0:26,0:23:60.16:0,60,823	0/0:26,0:24:69.11:0,69,926	0/0:3,0:3:3.74:0,4,9	0/1:16,3:18:4.93:145,0,5	1/1:0,2:2:5.64:27,6,0	0/0:14,0:14:32.97:0,33,396	0/1:14,2:16:13.09:68,0,13	0/1:3,3:6:0.81:44,0,1	0/0:25,0:25:66.13:0,66,856	0/1:14,1:14:27.60:67,0,28	0/1:13,0:13:14.32:48,0,14	0/1:7,0:7:3.06:68,0,3
chr10	90939844	.	GAAGAAAAAA	G	7570.40	PASS	AB=0.593;AC=29;AF=0.518;AN=56;BaseQRankSum=11.875;DP=393;FS=54.757;HRun=0;HaplotypeScore=137.5491;InbreedingCoeff=0.8800;MQ=59.16;MQ0=7;MQRankSum=-10.072;QD=51.85;ReadPosRankSum=2.219;VQSLOD=2.6070;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:37:99:0,111,4279	0/0:10,0:10:21.07:0,21,872	0/0:23,0:8:23.72:0,24,519	0/0:13,0:10:9.49:0,9,453	1/1:4,12:16:39.04:776,39,0	1/1:1,7:8:21.07:513,21,0	1/1:4,4:8:18.06:386,18,0	1/1:2,17:18:46.80:510,47,0	1/1:1,7:8:24.08:637,24,0	0/0:21,0:21:62.78:0,63,2425	0/0:16,0:16:48.14:0,48,1703	1/1:2,3:5:15.05:310,15,0	0/0:9,0:9:18.06:0,18,680	1/1:2,1:3:9.03:146,9,0	0/0:13,0:13:36.06:0,36,1450	0/0:11,0:11:33.07:0,33,1474	0/0:26,0:23:60.21:0,60,2362	0/0:28,0:26:78.27:0,78,3214	1/1:1,3:4:12.02:265,12,0	1/1:3,13:15:45.15:1066,45,0	1/1:2,0:2:6.01:56,6,0	0/0:12,0:12:36.12:0,36,1374	1/1:2,15:17:26.48:537,26,0	1/1:3,3:6:9.07:165,9,0	0/0:24,0:24:66.23:0,66,2777	0/1:5,11:15:53.49:840,0,53	1/1:1,10:11:30.10:800,30,0	1/1:0,7:7:21.07:564,21,0
chr10	90939847	.	GA	G	332.71	PASS	AB=0.950;AC=25;AF=0.446;AN=56;BaseQRankSum=13.117;DP=428;FS=32.324;HRun=12;HaplotypeScore=122.4565;InbreedingCoeff=0.5064;MQ=60.73;MQ0=4;MQRankSum=-9.627;QD=1.69;ReadPosRankSum=4.584;VQSLOD=-0.6143;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,1:39:76.75:0,77,897	0/0:11,0:11:23.90:0,24,220	0/0:27,0:10:17.17:0,17,135	0/1:13,1:11:39.78:46,0,40	0/1:17,0:17:0.09:30,0,0	1/1:11,0:11:1.24:22,1,0	1/1:12,0:12:3.25:26,3,0	0/0:17,0:17:18.99:0,19,126	1/1:10,0:10:5.59:42,6,0	0/0:21,0:21:48.10:0,48,487	0/0:15,0:16:31.13:0,31,315	1/1:6,0:6:8.60:28,9,0	0/0:7,0:7:18.03:0,18,179	1/1:4,0:4:4.50:16,5,0	0/0:12,1:13:6.82:0,7,251	0/0:11,0:11:32.96:0,33,320	0/1:21,5:24:18.95:19,0,350	0/0:27,1:26:51.86:0,52,683	0/1:11,0:11:11.10:11,0,11	1/1:20,0:19:5.53:57,6,0	0/0:3,0:3:2.13:0,2,5	0/0:11,1:12:8.64:0,9,256	1/1:17,0:17:11.62:37,12,0	1/1:6,0:6:3.94:12,4,0	0/0:22,2:24:19.57:0,20,537	0/1:19,0:19:7.03:37,0,7	1/1:16,0:16:28.96:93,29,0	1/1:7,0:7:14.04:42,14,0
chr10	90939853	.	A	AAG	2292.24	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=10.645;DP=456;FS=57.957;HRun=0;HaplotypeScore=119.0164;InbreedingCoeff=0.8354;MQ=63.87;MQ0=4;MQRankSum=-7.510;QD=10.81;ReadPosRankSum=-2.176;VQSLOD=0.6309;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:38:99:0,107,1398	0/0:11,0:11:26.84:0,27,336	0/0:27,0:11:29.45:0,29,259	0/1:15,0:13:1.77:2,0,168	1/1:16,0:16:21.11:133,21,0	1/1:14,0:14:28.66:202,29,0	1/1:14,0:14:29.18:234,29,0	1/1:18,0:18:42.10:350,42,0	1/1:11,0:11:19.52:90,20,0	0/0:21,0:21:57.17:0,57,790	0/0:16,0:16:47.77:0,48,562	1/1:3,3:6:5.01:53,5,0	0/0:7,0:7:17.85:0,18,232	1/1:7,0:7:15.78:118,16,0	0/0:14,0:14:35.97:0,36,464	0/0:14,0:14:42.05:0,42,538	0/0:27,0:25:63.12:0,63,763	0/0:29,0:27:78.19:0,78,1047	1/1:19,1:20:55.90:545,56,0	1/1:22,0:22:42.36:275,42,0	1/1:5,0:5:8.99:74,9,0	0/0:13,0:13:33.10:0,33,457	1/1:15,0:15:8.27:23,8,0	1/1:5,0:5:4.71:22,5,0	0/0:25,0:25:72.16:0,72,963	0/1:18,0:18:8.04:165,0,8	1/1:17,0:17:34.28:173,34,0	1/1:9,0:9:14.08:53,14,0
chr10	90940783	.	A	AT	5188.99	PASS	AB=0.559;AC=28;AF=0.500;AN=56;BaseQRankSum=-7.932;DP=366;FS=1.951;HRun=8;HaplotypeScore=37.8335;InbreedingCoeff=0.8517;MQ=67.30;MQ0=0;MQRankSum=0.953;QD=27.03;ReadPosRankSum=-0.651;VQSLOD=4.8864;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.03:0,63,577	0/0:1,0:1:3:0,3,27	0/0:5,0:5:8.83:0,9,69	0/0:5,0:4:8.76:0,9,56	1/1:1,11:12:30.09:346,30,0	0/1:2,7:9:9.41:155,0,9	1/1:2,13:15:30.09:342,30,0	1/1:3,24:27:69.20:796,69,0	1/1:2,11:13:30.09:346,30,0	0/0:13,0:12:27.01:0,27,245	0/0:10,0:10:30.02:0,30,275	1/1:3,7:10:21.06:242,21,0	0/0:16,0:16:45.02:0,45,411	1/1:1,8:9:21.06:242,21,0	0/0:14,0:14:42:0,42,376	0/0:10,0:10:27:0,27,244	0/0:21,0:22:59.06:0,59,528	0/0:27,0:27:81:0,81,733	1/1:2,15:17:45.13:512,45,0	1/1:1,13:14:36.05:400,36,0	1/1:2,8:10:21.06:242,21,0	0/0:6,0:6:14.16:0,14,136	1/1:0,12:12:30.09:346,30,0	1/1:1,7:8:18.05:208,18,0	0/0:22,0:22:51.02:0,51,467	0/1:2,8:10:0.39:250,0,0	1/1:2,13:15:36.11:415,36,0	1/1:1,10:11:30.09:346,30,0
chr10	90941204	.	T	TTTC	1421.49	PASS	AB=0.976;AC=13;AF=0.232;AN=56;BaseQRankSum=-2.958;DP=523;FS=0.000;HRun=0;HaplotypeScore=96.6166;InbreedingCoeff=0.5698;MQ=49.86;MQ0=36;MQRankSum=-1.600;QD=13.80;ReadPosRankSum=2.896;VQSLOD=3.3164;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:33:61.75:0,62,901	0/0:11,0:11:13.21:0,13,133	0/0:79,0:18:39.34:0,39,270	0/0:82,0:20:36.84:0,37,340	0/0:16,0:15:11.28:0,11,186	0/0:8,0:6:9.56:0,10,49	0/1:11,0:11:2:2,0,35	0/0:23,0:23:30.22:0,30,178	0/0:10,0:9:8.92:0,9,66	0/1:14,0:13:18.63:155,0,19	1/1:13,0:13:14.04:117,14,0	0/0:10,0:10:5.52:0,6,26	1/1:2,2:4:9.02:134,9,0	0/0:8,0:8:17.74:0,18,126	0/0:21,0:21:28.58:0,29,363	0/1:12,1:13:2.55:188,0,3	0/0:26,0:25:44.01:0,44,670	1/1:12,6:18:44.07:543,44,0	0/0:18,0:14:8.62:0,9,186	0/0:10,0:8:1.36:0,1,37	0/0:7,0:6:5.86:0,6,26	1/1:10,2:11:18.32:236,18,0	0/0:14,0:12:15.50:0,16,108	0/0:6,0:5:2.98:0,3,22	1/1:16,2:18:4.16:212,4,0	0/0:10,0:9:14.67:0,15,75	0/0:11,0:11:18.12:0,18,127	0/0:14,0:13:5.62:0,6,71
chr10	90941227	.	T	TTC	423.68	PASS	AB=0.935;AC=17;AF=0.304;AN=56;BaseQRankSum=6.530;DP=417;FS=9.043;HRun=0;HaplotypeScore=66.0201;InbreedingCoeff=0.0546;MQ=39.59;MQ0=42;MQRankSum=-2.640;QD=1.87;ReadPosRankSum=0.240;VQSLOD=-0.1874;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:28:75.13:0,75,1063	0/0:9,0:9:24.08:0,24,365	0/1:48,0:5:4.66:5,0,51	0/1:52,0:10:3.25:3,0,94	0/0:8,0:8:0.16:0,0,77	0/1:6,0:5:15.32:15,0,32	0/1:7,2:8:28.14:64,0,28	0/1:20,2:22:50.41:185,0,50	0/0:6,0:5:5.91:0,6,51	0/0:11,0:9:18.97:0,19,216	0/0:14,0:14:23.21:0,23,228	1/1:9,0:9:6.40:40,6,0	0/0:4,0:4:5.95:0,6,48	0/1:6,0:6:5.95:6,0,63	0/0:15,0:15:23.94:0,24,328	0/0:13,0:13:21.01:0,21,262	0/0:25,0:23:57.10:0,57,717	0/0:13,0:13:25.81:0,26,248	0/1:15,0:11:57.98:58,0,85	0/0:5,0:3:4.83:0,5,46	1/1:7,0:7:3.69:8,4,0	0/0:9,0:8:12.48:0,12,132	0/0:11,0:8:0.62:0,1,18	1/1:10,0:7:5.20:28,5,0	0/0:12,0:12:13.01:0,13,164	1/1:14,0:12:1.13:92,1,0	0/1:7,1:8:32.05:32,0,86	0/1:12,1:10:37.36:37,0,62
chr10	90941312	.	AC	A	369.66	PASS	AB=0.778;AC=15;AF=0.300;AN=50;BaseQRankSum=-3.286;DP=169;FS=5.149;HRun=11;HaplotypeScore=35.0030;InbreedingCoeff=0.3384;MQ=69.65;MQ0=14;MQRankSum=0.247;QD=5.96;ReadPosRankSum=5.272;VQSLOD=0.1985;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:6,1:7:12.61:13,0,83	0/0:1,0:1:0:0,0,0	0/0:9,1:7:13.48:0,13,111	0/0:14,0:6:8.50:0,9,83	0/0:4,0:6:2.99:0,3,23	./.	0/0:3,0:9:13.39:0,13,64	0/0:6,0:3:2.96:0,3,19	0/0:2,0:3:5.78:0,6,32	1/1:1,2:3:3:25,3,0	1/1:4,3:7:5.29:48,5,0	0/0:3,0:2:5.90:0,6,37	1/1:5,2:6:2.98:25,3,0	0/0:2,0:3:2.96:0,3,19	0/0:6,0:7:2.17:0,2,57	1/1:4,2:5:5.99:49,6,0	0/0:12,0:11:15.03:0,15,153	1/1:3,10:14:15.84:229,16,0	0/0:2,0:8:8.63:0,9,52	./.	./.	0/1:2,5:7:7.38:62,0,7	0/0:2,0:3:0.47:0,0,1	0/0:4,0:5:5.72:0,6,29	1/1:2,2:4:5.98:47,6,0	0/1:4,1:7:15.95:16,0,20	0/0:0,0:3:2.92:0,3,17	0/0:4,0:2:2.84:0,3,14
chr10	90943195	.	CTTTT	C	3113.14	PASS	AC=30;AF=0.577;AN=52;BaseQRankSum=5.668;DP=272;FS=0.000;HRun=15;HaplotypeScore=65.3421;InbreedingCoeff=0.8128;MQ=28.66;MQ0=44;MQRankSum=-2.353;QD=22.56;ReadPosRankSum=1.645;VQSLOD=2.4291;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:11:4.04:0,4,70	0/0:0,0:3:6.02:0,6,74	./.	./.	1/1:1,10:14:26.86:274,27,0	1/1:2,6:9:21.02:233,21,0	1/1:3,1:3:9.02:95,9,0	1/1:4,7:8:24.02:250,24,0	1/1:4,9:13:33.05:363,33,0	0/0:6,0:11:20.58:0,21,129	0/0:1,0:8:2.92:0,3,17	1/1:2,7:10:27.03:277,27,0	0/0:2,0:2:0:0,0,0	1/1:0,7:7:21.05:224,21,0	0/0:3,0:10:11.95:0,12,132	0/0:4,0:11:15.50:0,16,97	0/0:10,0:9:18.02:0,18,221	0/0:9,0:11:23.57:0,24,147	1/1:2,2:5:14.88:121,15,0	1/1:5,7:12:26.95:279,27,0	1/1:3,4:6:17.89:158,18,0	0/0:7,0:14:2.61:0,3,17	1/1:2,5:7:18.05:196,18,0	1/1:0,4:4:6.02:81,6,0	0/0:1,0:6:9.82:0,10,74	1/1:6,7:13:32.99:331,33,0	1/1:4,13:16:33.05:348,33,0	1/1:2,2:2:6.02:69,6,0
chr10	90943209	.	TTC	T	1153.62	PASS	AB=0.970;AC=37;AF=0.712;AN=52;BaseQRankSum=5.202;DP=276;FS=34.279;HRun=0;HaplotypeScore=66.8073;InbreedingCoeff=-0.0941;MQ=30.25;MQ0=45;MQRankSum=-4.581;QD=4.56;ReadPosRankSum=5.406;VQSLOD=0.3250;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:12:9.08:9,0,43	0/0:3,0:3:5.60:0,6,25	./.	./.	1/1:15,0:15:25.15:124,25,0	1/1:9,0:9:4.28:59,4,0	1/1:3,0:3:8.28:38,8,0	0/1:14,0:12:41.01:57,0,41	0/1:14,0:13:0.98:114,0,1	0/1:6,1:7:9.79:61,0,10	1/1:8,0:8:2.50:9,2,0	1/1:10,0:9:23.39:99,23,0	0/1:2,0:2:0:0,0,0	1/1:7,0:7:18.92:78,19,0	0/1:9,0:9:8.56:9,0,30	0/1:9,1:10:6.95:58,0,7	0/1:22,0:13:3.24:3,0,65	0/1:19,1:12:7.14:7,0,53	0/1:6,0:6:19.97:31,0,20	1/1:12,0:10:24.82:120,25,0	1/1:6,0:6:14.30:68,14,0	1/1:9,1:9:5.65:31,6,0	1/1:9,0:9:16.58:80,17,0	1/1:4,0:4:2.49:5,2,0	0/1:6,1:7:12.19:44,0,12	1/1:13,0:12:11.10:97,11,0	0/1:18,0:17:12.27:74,0,12	0/1:4,0:3:10.70:20,0,11
chr10	90943218	.	TC	T	2870.24	PASS	AC=30;AF=0.577;AN=52;BaseQRankSum=7.932;DP=293;FS=2.534;HRun=2;HaplotypeScore=62.4088;InbreedingCoeff=0.8579;MQ=34.39;MQ0=45;MQRankSum=-4.365;QD=18.28;ReadPosRankSum=1.762;VQSLOD=3.9445;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:20.99:0,21,225	0/0:6,0:6:15.01:0,15,160	./.	./.	1/1:7,9:15:17.99:162,18,0	1/1:3,7:10:30.02:277,30,0	1/1:0,1:1:3:29,3,0	1/1:2,11:12:29.91:254,30,0	1/1:3,9:11:26.84:225,27,0	0/0:8,0:8:24:0,24,276	0/0:4,0:4:3.01:0,3,36	1/1:4,8:11:32.93:291,33,0	0/0:2,0:2:3.01:0,3,38	1/1:1,7:8:23.98:220,24,0	0/0:9,0:9:15.02:0,15,164	0/0:9,0:9:15.02:0,15,169	0/0:25,0:16:29.99:0,30,342	0/0:18,0:12:27.05:0,27,363	1/1:0,10:10:29.98:265,30,0	1/1:2,10:10:20.99:189,21,0	1/1:1,6:7:6:54,6,0	0/0:8,0:8:5.60:0,6,65	1/1:0,8:8:12.01:113,12,0	1/1:2,4:6:11.68:78,12,0	0/0:8,0:8:20.86:0,21,217	1/1:1,14:13:35.71:307,36,0	1/1:10,13:23:59.97:532,60,0	1/1:3,1:4:8.99:77,9,0
chr10	90943902	.	ATG	A	13907.16	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=11.391;DP=1035;FS=0.000;HRun=0;HaplotypeScore=166.7658;InbreedingCoeff=0.9994;MQ=54.87;MQ0=23;MQRankSum=3.249;QD=25.95;ReadPosRankSum=2.653;VQSLOD=5.4937;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:45:90:0,90,1640	0/0:13,0:13:39.13:0,39,652	0/0:62,1:20:49.98:0,50,761	0/0:51,1:23:53.73:0,54,778	1/1:5,34:39:64.34:928,64,0	1/1:4,19:22:39.13:519,39,0	1/1:4,28:31:47.69:639,48,0	1/1:25,33:53:99:1733,132,0	1/1:12,16:28:81.15:1059,81,0	0/0:51,0:51:99:0,138,2255	0/0:22,0:22:51.40:0,51,912	1/1:4,29:33:56.98:741,57,0	0/0:38,0:38:87.25:0,87,1439	1/1:5,27:32:51.17:679,51,0	0/0:47,0:47:99:0,120,1989	0/0:48,0:48:99:0,119,2022	0/0:36,0:36:76.84:0,77,1372	0/0:27,0:27:41.57:0,42,740	1/1:6,27:27:75.22:977,75,0	1/1:1,34:34:42.10:539,42,0	1/1:28,48:72:99:2338,184,0	0/0:35,0:35:96.30:0,96,1624	1/1:1,30:29:36.11:479,36,0	1/1:18,20:36:86.97:1103,87,0	0/0:22,0:22:63.22:0,63,1080	1/1:19,21:37:99:1345,105,0	1/1:5,20:25:41.12:550,41,0	1/1:3,10:13:20.89:279,21,0
chr10	90943910	.	GTT	G	3575.81	PASS	AB=0.995;AC=22;AF=0.393;AN=56;BaseQRankSum=18.621;DP=1048;FS=2.473;HRun=3;HaplotypeScore=202.2313;InbreedingCoeff=0.3105;MQ=54.95;MQ0=25;MQRankSum=2.008;QD=6.56;ReadPosRankSum=8.716;VQSLOD=-0.4246;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:47:99:0,111,1955	0/0:13,0:13:39.13:0,39,751	0/0:61,0:18:39.71:0,40,638	0/0:48,0:23:40.23:0,40,694	0/1:39,0:39:52.08:237,0,52	0/1:21,1:21:11.60:126,0,12	1/1:33,0:32:21.20:169,21,0	0/1:57,0:53:26.38:548,0,26	1/1:31,0:31:0.04:249,0,0	0/0:49,0:49:99:0,147,2496	0/0:22,0:22:50.97:0,51,1047	1/1:33,0:33:5.64:171,6,0	0/0:39,0:39:99:0,117,1727	1/1:29,0:30:7.94:178,8,0	0/0:47,0:47:99:0,136,2280	0/0:50,0:50:99:0,141,2233	0/0:36,1:36:67.82:0,68,1518	0/0:28,0:28:57.36:0,57,931	1/1:31,0:26:40.24:263,40,0	0/1:37,0:36:96.29:96,0,178	0/1:79,0:75:57.53:537,0,58	0/0:37,0:37:99:0,103,1842	0/1:31,0:29:37.18:108,0,37	0/1:40,0:38:28.20:253,0,28	0/0:24,0:24:72.22:0,72,1268	1/1:37,2:36:63:401,63,0	0/1:29,0:28:99:138,0,114	1/1:14,0:14:4.71:101,5,0
chr10	90944115	.	A	ATGTGTGTGTC	6024.98	PASS	AB=0.696;AC=11;AF=0.204;AN=54;BaseQRankSum=1.104;DP=1516;FS=1.755;HRun=0;HaplotypeScore=460.7416;InbreedingCoeff=0.7918;MQ=51.59;MQ0=14;MQRankSum=-5.649;QD=18.48;ReadPosRankSum=-5.530;VQSLOD=1.3149;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:66:99:0,141,3893	0/0:15,0:15:39.13:0,39,1125	0/0:75,0:31:63.11:0,63,1207	0/0:48,0:21:35.96:0,36,610	0/0:66,0:66:96.44:0,96,3617	0/0:45,0:45:54.19:0,54,1672	0/0:45,0:44:51.43:0,51,1704	0/0:77,0:74:50.01:0,50,2962	0/0:87,0:86:17.84:0,18,3279	1/1:11,52:74:99:4129,146,0	0/1:6,27:35:0.01:0,0,0	0/0:56,0:56:81.38:0,81,2075	1/1:13,39:55:12.41:609,12,0	0/0:48,0:48:28.12:0,28,1809	0/0:69,0:69:99:0,165,4501	1/1:9,48:61:6.42:272,6,0	0/1:24,0:24:5.94:6,0,1084	1/1:23,2:25:19.74:1009,20,0	0/0:38,0:33:43.33:0,43,1457	0/0:46,0:45:79.76:0,80,2302	0/0:123,0:121:99:0,253,7027	0/1:8,37:52:0:0,0,0	0/0:51,0:51:89.81:0,90,2649	0/0:78,0:78:99:0,158,3891	./.	0/0:66,0:66:29.69:0,30,2980	0/0:42,0:41:22.60:0,23,1479	0/0:16,0:16:17.36:0,17,1111
chr10	90944385	.	C	CTG	5379.41	PASS	AB=0.820;AC=13;AF=0.232;AN=56;BaseQRankSum=18.395;DP=1500;FS=49.966;HRun=0;HaplotypeScore=406.4056;InbreedingCoeff=-0.3077;MQ=50.35;MQ0=16;MQRankSum=-14.564;QD=7.09;ReadPosRankSum=-4.386;VQSLOD=2.9675;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:92.49:0,92,1395	0/0:16,0:16:45.09:0,45,548	0/0:60,0:24:46.23:0,46,459	0/0:52,0:27:6.69:0,7,550	0/1:40,14:54:83.20:83,0,880	0/1:33,10:42:99:183,0,614	0/1:53,6:57:99:129,0,798	0/1:69,14:75:99:541,0,904	0/1:58,19:77:99:704,0,1235	0/0:56,0:56:99:0,141,1850	0/0:23,0:23:45.11:0,45,598	0/1:53,12:65:99:488,0,1207	0/0:38,0:38:99:0,108,1380	0/1:41,20:61:99:613,0,953	0/0:56,0:56:99:0,150,1945	0/0:55,0:56:99:0,141,1837	0/0:29,0:29:75.21:0,75,963	0/0:31,0:31:71.97:0,72,930	0/1:33,4:32:99:250,0,646	0/1:62,24:86:99:628,0,1620	0/0:119,3:120:99:0,147,2392	0/0:41,0:41:74.79:0,75,966	0/1:28,15:43:99:319,0,682	0/0:69,8:77:41.15:0,41,1064	0/0:29,0:29:81.27:0,81,1075	0/1:59,21:78:99:1016,0,1590	0/1:30,6:36:92.99:93,0,825	0/1:27,8:35:99:331,0,833
chr10	90944429	.	CTG	C	8562.26	PASS	AB=0.768;AC=15;AF=0.268;AN=56;BaseQRankSum=14.040;DP=1595;FS=15.033;HRun=0;HaplotypeScore=382.9040;InbreedingCoeff=-0.3681;MQ=51.73;MQ0=30;MQRankSum=-7.677;QD=7.65;ReadPosRankSum=-4.396;VQSLOD=3.1897;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,129,2160	0/0:16,0:16:43.05:0,43,756	0/0:38,0:9:11.39:0,11,231	0/0:39,0:21:34.51:0,35,510	0/1:38,29:67:99:475,0,1119	0/1:26,17:43:99:308,0,668	0/1:42,37:79:99:401,0,1232	0/1:66,7:70:99:655,0,1571	0/1:80,34:112:99:1197,0,2348	0/0:62,0:61:99:0,166,2717	0/0:19,0:19:51.17:0,51,847	0/1:65,20:85:99:571,0,2164	0/0:32,0:32:90.31:0,90,1557	0/1:37,30:68:99:544,0,1286	0/0:40,0:40:99:0,114,1931	0/0:46,0:45:99:0,129,2182	0/0:30,0:30:78.27:0,78,1335	0/0:28,0:28:75.24:0,75,1265	0/1:43,5:34:99:466,0,413	0/1:62,37:99:99:655,0,2186	0/1:105,23:124:99:567,0,3063	0/0:40,0:40:99:0,99,1592	0/1:32,26:58:99:460,0,1186	0/1:57,25:80:99:676,0,1343	0/0:32,0:32:75.26:0,75,1297	0/1:67,26:88:99:1137,0,1873	0/1:30,21:51:99:324,0,1184	0/1:24,7:31:99:126,0,918
chr10	90945459	.	TG	T	3835.45	PASS	AB=1.000;AC=55;AF=0.982;AN=56;BaseQRankSum=-2.900;DP=232;FS=13.073;HRun=9;HaplotypeScore=80.6040;InbreedingCoeff=0.0648;MQ=56.42;MQ0=1;MQRankSum=-2.940;QD=16.53;ReadPosRankSum=1.873;VQSLOD=2.6975;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,11:17:29.90:257,30,0	1/1:2,1:3:3:27,3,0	1/1:2,3:5:9:82,9,0	0/1:5,0:4:5.31:5,0,33	1/1:0,3:3:3:27,3,0	1/1:2,4:6:8.98:81,9,0	1/1:7,16:23:50.83:433,51,0	1/1:3,3:6:12:108,12,0	1/1:2,3:5:11.84:95,12,0	1/1:2,10:12:29.78:257,30,0	1/1:3,7:10:14.99:133,15,0	1/1:2,9:11:27:241,27,0	1/1:2,2:4:8.93:67,9,0	1/1:1,8:9:23.98:209,24,0	1/1:4,3:7:11.93:99,12,0	1/1:2,7:9:18:160,18,0	1/1:4,6:10:17.98:161,18,0	1/1:4,10:14:29.85:253,30,0	1/1:7,3:10:8.96:82,9,0	1/1:0,3:3:3:27,3,0	1/1:9,12:20:26.56:233,27,0	1/1:0,2:2:3:27,3,0	1/1:2,3:5:8.97:79,9,0	1/1:1,6:7:9:80,9,0	1/1:1,9:10:30.02:269,30,0	1/1:2,6:8:18:158,18,0	1/1:0,3:3:9:81,9,0	1/1:1,3:4:11.99:104,12,0
chr10	90946331	.	G	GATAATA	5959.95	PASS	AB=1.000;AC=44;AF=0.815;AN=54;BaseQRankSum=8.318;DP=353;FS=5.595;HRun=0;HaplotypeScore=75.3761;InbreedingCoeff=0.6773;MQ=62.14;MQ0=0;MQRankSum=-3.977;QD=21.59;ReadPosRankSum=-3.485;VQSLOD=3.0833;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.08:0,69,1203	0/0:3,0:3:9.03:0,9,193	0/1:5,0:5:0.83:1,0,24	0/1:5,0:5:0.65:1,0,32	1/1:5,4:9:9.03:204,9,0	1/1:6,11:20:12.04:331,12,0	1/1:1,0:2:3.01:34,3,0	1/1:44,0:43:67.34:714,67,0	1/1:1,5:8:9.03:296,9,0	1/1:0,0:10:29.49:195,29,0	1/1:2,0:12:26.40:161,26,0	1/1:2,2:4:3.01:99,3,0	1/1:2,0:7:11.82:75,12,0	1/1:0,6:6:9.03:296,9,0	0/0:11,0:11:15.04:0,15,282	1/1:5,0:13:11.82:75,12,0	0/0:33,0:34:65.37:0,65,1385	1/1:6,0:21:38.44:244,38,0	1/1:8,8:17:27.03:465,27,0	1/1:6,2:8:6.02:197,6,0	1/1:8,1:9:12.92:172,13,0	1/1:2,0:5:8.87:56,9,0	1/1:4,0:4:3:27,3,0	./.	1/1:3,0:13:26.02:157,26,0	1/1:5,5:10:17.81:346,18,0	1/1:4,12:17:26.92:888,27,0	1/1:5,17:27:30.10:925,30,0
chr10	90946864	.	G	GTT	2357.24	PASS	AB=0.981;AC=16;AF=0.286;AN=56;BaseQRankSum=-6.741;DP=544;FS=1.500;HRun=13;HaplotypeScore=128.7614;InbreedingCoeff=0.7441;MQ=72.76;MQ0=2;MQRankSum=-0.498;QD=12.28;ReadPosRankSum=-5.106;VQSLOD=1.0539;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:28:7.20:0,7,356	0/0:10,0:10:20.98:0,21,185	0/0:22,0:17:14.98:0,15,113	0/0:16,0:12:9.75:0,10,89	0/0:17,0:17:21.85:0,22,82	0/0:21,0:21:20.11:0,20,73	0/0:21,0:21:31.20:0,31,97	0/0:25,0:25:9.57:0,10,86	0/0:18,0:18:23.88:0,24,80	1/1:4,8:11:21.04:263,21,0	1/1:3,10:17:38.04:420,38,0	0/0:19,0:19:32.42:0,32,100	1/1:5,12:20:21.05:268,21,0	0/0:23,0:23:20.41:0,20,92	0/0:16,0:17:38.67:0,39,329	1/1:4,12:17:30.09:395,30,0	0/0:18,0:21:35.10:0,35,326	1/1:11,14:28:26.52:411,27,0	0/1:25,0:25:8.53:9,0,62	0/0:13,0:13:12.95:0,13,40	0/0:11,0:11:10.46:0,10,39	1/1:6,13:21:9.56:344,10,0	0/0:19,0:19:21.60:0,22,84	0/0:20,0:20:31.42:0,31,103	1/1:7,13:26:35.06:381,35,0	0/1:24,1:25:46.81:61,0,47	0/0:15,0:15:3.85:0,4,35	0/0:15,0:16:7.36:0,7,49
chr10	90946876	.	TTC	T	1962.53	PASS	AB=0.986;AC=21;AF=0.375;AN=56;BaseQRankSum=6.783;DP=531;FS=2.000;HRun=0;HaplotypeScore=109.0385;InbreedingCoeff=0.3527;MQ=69.03;MQ0=2;MQRankSum=-1.087;QD=6.84;ReadPosRankSum=3.507;VQSLOD=3.1055;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.67:0,85,1098	0/0:10,0:10:26.91:0,27,390	0/0:19,0:15:35.59:0,36,367	0/0:13,0:9:4.81:0,5,133	0/1:19,0:19:9.93:118,0,10	1/1:20,0:20:15.66:92,16,0	1/1:18,1:19:38.15:170,38,0	1/1:27,2:29:19.05:388,19,0	0/1:16,0:16:19.48:112,0,19	0/0:15,0:15:44.64:0,45,444	0/0:19,0:19:21.49:0,21,537	0/1:20,0:20:5.09:122,0,5	0/0:15,0:15:21.54:0,22,260	0/1:18,3:21:13.42:169,0,13	0/0:18,0:18:54.05:0,54,776	0/0:16,0:16:39.04:0,39,436	0/0:21,0:21:62.98:0,63,907	0/0:25,0:24:50.17:0,50,626	0/1:27,0:27:22.76:182,0,23	1/1:16,0:16:6.33:168,6,0	0/1:10,0:10:16.73:63,0,17	0/0:20,0:20:47.61:0,48,548	0/1:18,0:18:29.06:43,0,29	0/1:20,0:20:53.33:95,0,53	0/0:23,0:23:42.09:0,42,515	0/1:21,0:21:0.78:119,0,1	1/1:14,0:14:22.71:88,23,0	1/1:16,1:17:38.97:225,39,0
chr10	90946877	.	TC	T	7473.38	PASS	AB=0.813;AC=31;AF=0.554;AN=56;BaseQRankSum=3.322;DP=520;FS=4.272;HRun=2;HaplotypeScore=81.0477;InbreedingCoeff=0.9255;MQ=70.30;MQ0=2;MQRankSum=-1.491;QD=25.42;ReadPosRankSum=1.146;VQSLOD=4.6574;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:62.07:0,62,740	0/0:9,0:9:25.93:0,26,275	0/0:18,0:16:29.39:0,29,246	0/1:10,2:9:51.35:51,0,74	1/1:2,17:19:44.77:473,45,0	1/1:1,19:20:34.49:456,34,0	1/1:1,18:19:45.08:556,45,0	1/1:4,25:29:74.95:763,75,0	1/1:8,8:16:36.49:431,36,0	0/0:16,0:15:41.10:0,41,323	0/0:19,0:19:20.91:0,21,377	1/1:4,15:19:49.71:592,50,0	0/0:16,0:16:20.95:0,21,170	1/1:5,15:21:38.88:435,39,0	0/0:18,0:18:52.33:0,52,576	0/0:15,0:15:41.88:0,42,334	0/0:21,0:21:60.74:0,61,667	0/0:24,0:23:53.74:0,54,466	1/1:11,15:26:62.77:748,63,0	1/1:8,7:15:41.59:419,42,0	1/1:3,6:9:22.32:255,22,0	0/0:18,0:18:45.21:0,45,369	1/1:1,17:18:26.74:324,27,0	1/1:5,13:18:43.10:546,43,0	0/0:23,0:23:39.30:0,39,320	1/1:1,20:21:36.16:594,36,0	1/1:0,13:14:26.95:321,27,0	1/1:7,10:17:47.76:509,48,0
chr10	90947150	.	C	CAG	477.13	PASS	AB=0.978;AC=22;AF=0.524;AN=42;BaseQRankSum=-1.896;DP=610;FS=47.175;HRun=0;HaplotypeScore=93.1526;InbreedingCoeff=0.1655;MQ=73.63;MQ0=14;MQRankSum=-1.056;QD=1.34;ReadPosRankSum=-0.806;VQSLOD=-0.1503;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:48:8.80:0,9,60	./.	./.	0/1:73,0:23:0:0,0,0	1/1:10,0:10:6.02:82,6,0	0/1:16,0:15:22.89:56,0,23	1/1:32,3:35:3.01:44,3,0	1/1:28,0:27:4.23:25,4,0	0/1:18,5:24:8.47:38,0,8	0/1:6,0:6:0:0,0,0	./.	0/1:19,0:19:1.55:116,0,2	0/0:26,0:25:0.32:0,0,28	1/1:19,0:18:5.31:62,5,0	0/0:25,0:27:11.80:0,12,100	0/0:22,0:22:3:0,3,32	0/0:29,0:33:15.25:0,15,119	0/1:8,0:8:14.96:15,0,26	./.	./.	0/1:30,0:30:0:0,0,0	0/0:13,0:13:3.01:0,3,31	./.	1/1:20,12:33:3.01:44,3,0	./.	1/1:22,0:22:4.24:27,4,0	0/1:25,0:24:36.41:85,0,36	1/1:8,0:7:2.51:7,3,0
chr10	90947639	.	G	GTTATTTAT	2161.93	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=-6.437;DP=389;FS=29.896;HRun=0;HaplotypeScore=160.4725;InbreedingCoeff=0.7481;MQ=60.55;MQ0=1;MQRankSum=-6.861;QD=38.61;ReadPosRankSum=1.233;VQSLOD=1.6817;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:57.18:0,57,1346	0/0:7,0:7:9.03:0,9,229	0/1:9,0:9:11.41:11,0,39	0/0:11,0:10:2.96:0,3,76	0/0:10,0:10:12.04:0,12,304	0/0:19,0:19:42.14:0,42,1070	0/0:19,0:19:31.92:0,32,734	0/0:31,0:31:39.12:0,39,892	0/0:22,0:22:54.19:0,54,1320	1/1:3,4:7:12.04:497,12,0	1/1:2,4:6:12.04:486,12,0	0/0:6,0:6:15.05:0,15,382	1/1:1,1:2:3.01:124,3,0	0/0:17,0:17:42.14:0,42,1016	0/0:8,0:8:15.05:0,15,382	1/1:4,1:5:3.01:124,3,0	0/0:28,0:28:57.13:0,57,1312	1/1:15,4:20:15.05:621,15,0	0/0:18,0:17:24.08:0,24,531	0/0:12,0:12:27.09:0,27,664	0/0:13,0:14:18.06:0,18,431	./.	0/0:6,0:6:12.04:0,12,295	0/0:26,0:26:57.20:0,57,1337	1/1:2,4:7:15.04:465,15,0	0/0:17,0:16:32.46:0,32,683	0/0:23,0:23:54.19:0,54,1370	0/0:6,0:6:15.04:0,15,286
chr10	90948601	.	CAA	C	4809.24	PASS	AB=0.647;AC=42;AF=0.750;AN=56;BaseQRankSum=0.688;DP=438;FS=20.766;HRun=11;HaplotypeScore=55.2020;InbreedingCoeff=0.6851;MQ=50.45;MQ0=33;MQRankSum=2.314;QD=14.98;ReadPosRankSum=3.243;VQSLOD=1.6757;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:17.77:0,18,181	0/0:7,0:7:18.04:0,18,242	0/0:21,0:4:5.15:0,5,36	0/0:13,0:4:1.56:0,2,67	1/1:5,9:14:20.97:214,21,0	1/1:3,4:7:2.31:85,2,0	0/1:10,9:15:2.57:170,0,3	1/1:5,11:15:27.49:285,27,0	1/1:2,9:11:18.03:190,18,0	0/1:6,9:14:3.22:177,0,3	1/1:4,12:15:27.03:276,27,0	1/1:2,8:12:23.77:222,24,0	1/1:1,5:6:6:64,6,0	1/1:4,12:16:24.04:254,24,0	0/0:19,0:21:47.58:0,48,617	1/1:4,6:10:18.04:190,18,0	0/0:34,0:33:77.51:0,78,949	1/1:7,18:23:29.57:431,30,0	1/1:5,10:12:29.78:286,30,0	1/1:6,7:12:5.85:51,6,0	1/1:8,6:13:12:116,12,0	1/1:4,3:5:6.01:64,6,0	1/1:6,9:15:25.84:261,26,0	1/1:2,14:16:26.70:285,27,0	1/1:4,11:15:29.83:304,30,0	1/1:8,11:19:26.96:276,27,0	1/1:4,22:26:51.03:543,51,0	1/1:4,8:10:5.99:64,6,0
chr10	90948610	.	AAAG	A	489.82	PASS	AB=0.969;AC=14;AF=0.250;AN=56;BaseQRankSum=-1.678;DP=421;FS=23.861;HRun=0;HaplotypeScore=74.2835;InbreedingCoeff=-0.2386;MQ=61.77;MQ0=31;MQRankSum=-5.867;QD=2.90;ReadPosRankSum=-0.810;VQSLOD=0.1116;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:32.40:0,32,315	0/0:7,0:7:20.92:0,21,337	0/0:29,0:9:10.30:0,10,157	0/0:17,0:8:17.54:0,18,152	1/1:9,1:10:0.20:43,0,0	0/1:6,0:6:21.19:21,0,30	0/0:15,1:12:8.79:0,9,69	0/1:14,1:14:38.93:78,0,39	0/1:10,0:10:22.28:22,0,30	0/1:16,0:15:90.51:91,0,94	0/1:17,1:17:36.40:63,0,36	0/1:13,0:13:1.54:2,0,31	0/0:7,0:7:0.78:0,1,21	0/1:16,0:16:18.36:18,0,45	0/0:17,0:17:48.05:0,48,736	0/1:9,0:9:20.91:23,0,21	0/0:35,0:32:84.53:0,85,1345	0/0:23,0:21:15.56:0,16,94	0/1:13,1:12:29.90:100,0,30	0/0:9,0:8:9.22:0,9,70	0/1:11,1:11:52.99:63,0,53	0/0:6,0:4:1.26:0,1,3	0/0:14,0:14:6.60:0,7,49	0/1:14,0:14:17.24:20,0,17	0/0:13,0:13:7.62:0,8,26	0/1:14,2:16:56.96:89,0,57	0/0:25,0:24:16.94:0,17,100	0/0:11,0:10:3.93:0,4,26
chr10	90950182	.	A	AAGGTTAG	26414.88	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-0.902;DP=548;FS=3.851;HRun=0;HaplotypeScore=121.0206;InbreedingCoeff=0.9908;MQ=70.15;MQ0=0;MQRankSum=-16.818;QD=88.34;ReadPosRankSum=-1.891;VQSLOD=5.4874;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,2777	0/0:6,0:6:15.05:0,15,389	0/0:18,0:18:47.90:0,48,1141	0/0:18,0:18:45.13:0,45,1013	1/1:7,17:26:72.13:2280,72,0	1/1:7,20:28:66.23:2522,66,0	1/1:4,14:19:45.15:1720,45,0	1/1:16,6:23:48.15:1570,48,0	1/1:6,13:20:57.20:2103,57,0	0/0:18,0:18:54.19:0,54,1378	0/0:14,0:14:42.12:0,42,1013	1/1:6,12:19:51.03:1955,51,0	0/0:17,0:17:48.15:0,48,1194	1/1:6,10:17:42.10:1260,42,0	0/0:20,0:20:60.21:0,60,1518	0/0:22,0:22:66.23:0,66,1689	0/0:25,0:25:69.24:0,69,1729	0/0:22,0:22:66.23:0,66,1709	1/1:4,12:19:51.15:1650,51,0	1/1:3,20:23:63.22:2474,63,0	1/1:5,3:12:15.05:553,15,0	0/0:19,0:19:57.20:0,57,1444	1/1:5,13:20:48.16:1726,48,0	1/1:3,8:14:21.03:725,21,0	0/0:11,0:11:30.10:0,30,779	1/1:4,22:28:75.22:2735,75,0	1/1:8,18:26:69.24:2687,69,0	1/1:1,4:5:12.04:455,12,0
chr10	90951539	.	G	GA	1640.62	PASS	AB=0.839;AC=43;AF=0.768;AN=56;BaseQRankSum=1.150;DP=456;FS=2.274;HRun=16;HaplotypeScore=70.4795;InbreedingCoeff=-0.0640;MQ=85.33;MQ0=0;MQRankSum=0.002;QD=4.06;ReadPosRankSum=-4.846;VQSLOD=-0.2680;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:30,2:37:80.47:126,0,80	0/1:6,0:6:9.90:17,0,10	0/0:31,0:24:3.76:0,4,32	0/0:18,0:14:0.43:0,0,13	1/1:12,1:16:1.71:99,2,0	0/1:16,5:21:38.05:95,0,38	0/1:7,11:20:23.65:95,0,24	1/1:9,11:20:23.13:161,23,0	1/1:4,11:15:5.98:46,6,0	1/1:6,0:15:22.96:107,23,0	1/1:3,0:10:12.92:66,13,0	1/1:2,7:9:2.99:24,3,0	1/1:9,5:15:16.33:75,16,0	0/1:13,0:13:4.93:48,0,5	0/1:12,0:12:21.56:34,0,22	1/1:4,1:13:20.22:115,20,0	0/1:25,1:27:6.34:6,0,135	1/1:9,2:21:1.79:56,2,0	1/1:12,2:16:4.74:127,5,0	1/1:4,7:12:11.85:81,12,0	0/1:4,11:15:0.85:80,0,1	1/1:10,0:10:11.96:62,12,0	1/1:6,3:14:9.30:63,9,0	1/1:2,10:12:2.98:21,3,0	1/1:12,1:20:10.58:59,11,0	1/1:6,6:12:10.81:59,11,0	0/1:5,5:10:10.90:18,0,11	1/1:8,4:13:6.72:40,7,0
chr10	90952851	.	G	GCA	7510.13	PASS	AB=0.662;AC=16;AF=0.286;AN=56;BaseQRankSum=-12.435;DP=809;FS=0.724;HRun=0;HaplotypeScore=104.5159;InbreedingCoeff=-0.1490;MQ=60.82;MQ0=18;MQRankSum=0.853;QD=15.71;ReadPosRankSum=1.080;VQSLOD=4.8604;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,1:51:70.32:0,70,1243	0/0:9,0:10:29.92:0,30,327	0/0:27,0:6:8.89:0,9,83	0/0:25,0:5:2.97:0,3,20	0/1:8,9:16:83.28:154,0,83	0/1:11,10:22:25.78:388,0,26	0/1:26,19:46:99:711,0,108	0/1:18,12:30:88.18:473,0,88	0/1:12,13:29:76.43:489,0,76	0/0:29,0:31:36.76:0,37,657	0/0:12,0:12:26.90:0,27,283	0/1:9,21:31:65.94:392,0,66	0/0:20,0:21:41.95:0,42,463	1/1:9,25:34:33.90:687,34,0	0/0:18,0:18:33.07:0,33,363	0/0:16,0:19:41.96:0,42,466	0/0:30,0:34:67.37:0,67,795	0/0:34,0:35:84.08:0,84,950	0/1:18,5:23:99:316,0,99	0/1:8,14:23:1.72:433,0,2	0/1:31,52:86:99:1291,0,132	0/0:23,0:25:44.97:0,45,501	0/1:12,10:21:48.60:213,0,49	0/1:21,22:43:99:768,0,136	0/0:20,0:22:56.66:0,57,591	0/1:15,18:32:12.62:722,0,13	0/1:6,12:20:4.22:257,0,4	0/1:6,6:12:16.78:216,0,17
chr10	90953402	.	T	TAAGCTGTG	25305.93	PASS	AB=0.623;AC=29;AF=0.518;AN=56;BaseQRankSum=-10.690;DP=628;FS=5.895;HRun=0;HaplotypeScore=142.7673;InbreedingCoeff=0.9447;MQ=72.82;MQ0=0;MQRankSum=-15.742;QD=72.72;ReadPosRankSum=-3.615;VQSLOD=3.4728;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.23:0,66,1741	0/0:19,0:19:45.13:0,45,1099	0/0:14,0:13:18.95:0,19,411	0/0:18,0:18:22.87:0,23,411	1/1:3,16:19:35.99:1213,36,0	1/1:7,20:28:51.18:2185,51,0	1/1:12,13:25:51.18:2115,51,0	1/1:7,9:21:51.08:1618,51,0	1/1:11,17:30:60.21:2529,60,0	0/0:23,0:23:66.23:0,66,1717	0/0:13,0:13:30.09:0,30,731	1/1:6,12:20:42.14:1763,42,0	0/0:11,0:11:27.09:0,27,667	1/1:9,15:24:57.20:2424,57,0	0/0:29,0:29:78.23:0,78,1960	0/0:24,0:24:72.23:0,72,1887	0/0:39,0:39:96.31:0,96,2499	0/0:26,0:26:72.25:0,72,1872	1/1:9,4:15:30.07:940,30,0	1/1:10,16:26:42.10:1655,42,0	1/1:12,9:22:15.05:588,15,0	0/0:23,0:23:63.20:0,63,1566	1/1:7,14:21:36.04:1288,36,0	1/1:14,7:25:11.91:513,12,0	0/0:15,0:15:42.14:0,42,1120	0/1:13,19:33:2.73:2674,0,3	1/1:6,17:25:69.24:2901,69,0	1/1:3,7:13:21.07:901,21,0
chr10	90953776	.	GCAAACACACA	G	3929.78	PASS	AB=0.509;AC=23;AF=0.442;AN=52;BaseQRankSum=7.924;DP=432;FS=4.834;HRun=0;HaplotypeScore=130.4081;InbreedingCoeff=0.6636;MQ=56.47;MQ0=10;MQRankSum=-2.252;QD=23.12;ReadPosRankSum=0.753;VQSLOD=2.9068;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:81.16:0,81,2759	0/0:6,0:6:13.28:0,13,420	0/0:5,0:2:3.01:0,3,30	0/0:9,0:5:1.75:0,2,39	1/1:9,0:12:9.92:75,10,0	0/1:0,8:10:7.95:265,0,8	1/1:16,3:19:32.96:416,33,0	1/1:16,0:16:41.46:298,41,0	1/1:0,15:16:12.51:354,13,0	0/0:22,0:22:32.86:0,33,640	0/0:11,0:13:14.73:0,15,202	1/1:0,17:17:8.86:296,9,0	0/0:18,0:17:41.57:0,42,432	1/1:0,12:12:9.03:297,9,0	0/0:15,0:15:36.11:0,36,1427	0/0:20,0:19:21.73:0,22,203	0/0:41,0:41:99:0,111,3788	0/0:28,0:28:53.59:0,54,706	1/1:1,6:6:17.65:276,18,0	./.	./.	0/0:13,0:12:31.82:0,32,275	1/1:0,7:7:3.48:100,3,0	0/1:1,19:21:8.27:183,0,8	0/0:9,0:9:14.74:0,15,114	0/1:1,15:17:5.54:775,0,6	1/1:0,12:12:11.65:396,12,0	1/1:0,3:3:6.02:199,6,0
chr10	90953777	.	CAA	C	1498.99	PASS	AB=1.000;AC=28;AF=0.538;AN=52;BaseQRankSum=9.730;DP=434;FS=12.731;HRun=3;HaplotypeScore=96.0786;InbreedingCoeff=0.6384;MQ=55.32;MQ0=10;MQRankSum=-3.769;QD=6.72;ReadPosRankSum=-0.147;VQSLOD=-0.7268;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:13.78:14,0,758	0/0:5,0:5:13.25:0,13,133	0/0:4,0:1:3.01:0,3,30	0/0:10,0:5:1.67:0,2,39	1/1:13,0:12:14.88:125,15,0	1/1:10,0:10:8.97:70,9,0	1/1:19,0:19:32.93:265,33,0	1/1:2,14:16:41.60:302,42,0	1/1:16,0:16:11.91:88,12,0	0/1:21,0:21:18.27:18,0,236	0/0:13,0:13:5.18:0,5,34	1/1:17,0:17:8.96:69,9,0	0/0:18,0:17:29.43:0,29,209	1/1:12,0:12:8.97:70,9,0	0/0:17,0:17:38.72:0,39,515	0/0:21,0:20:2.08:0,2,99	0/0:43,0:43:51.66:0,52,1299	0/0:28,0:28:51.52:0,52,385	1/1:7,0:6:17.62:127,18,0	./.	./.	0/0:13,0:12:13.89:0,14,98	1/1:7,0:7:2.99:24,3,0	1/1:21,0:21:8.95:67,9,0	0/0:9,0:9:8.90:0,9,74	1/1:17,0:17:19.85:310,20,0	1/1:12,0:12:11.96:94,12,0	1/1:3,0:3:5.99:47,6,0
chr10	90953779	.	AACACAC	A	2602.37	PASS	AB=0.700;AC=37;AF=0.771;AN=48;BaseQRankSum=8.012;DP=444;FS=3.267;HRun=0;HaplotypeScore=114.2172;InbreedingCoeff=0.5984;MQ=53.75;MQ0=12;MQRankSum=-8.887;QD=9.29;ReadPosRankSum=0.112;VQSLOD=2.4413;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:62.60:0,63,1730	0/0:8,0:8:17.13:0,17,405	./.	./.	1/1:13,0:12:5.97:101,6,0	1/1:10,0:10:9.03:126,9,0	1/1:18,0:18:6.02:84,6,0	0/0:14,0:14:0.47:0,0,1	1/1:16,0:16:11.99:145,12,0	1/1:11,10:21:27.09:551,27,0	1/1:6,6:13:7:35,7,0	1/1:17,0:17:8.93:125,9,0	1/1:11,7:17:14.83:224,15,0	1/1:12,0:12:9.03:125,9,0	0/0:17,0:17:30.10:0,30,905	1/1:7,15:21:14.75:182,15,0	0/0:42,0:44:81.28:0,81,2343	0/1:16,12:28:16.88:114,0,17	1/1:7,0:6:6.02:89,6,0	./.	./.	1/1:7,7:13:17.72:155,18,0	1/1:7,0:7:3.48:43,3,0	1/1:21,0:21:6.02:78,6,0	1/1:7,2:10:2.97:20,3,0	1/1:17,0:17:19.89:310,20,0	1/1:12,0:12:11.88:167,12,0	1/1:3,0:3:6.02:84,6,0
chr10	90953930	.	CGT	C	12361.31	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=10.560;DP=710;FS=6.680;HRun=0;HaplotypeScore=98.9184;InbreedingCoeff=0.9863;MQ=67.46;MQ0=9;MQRankSum=-0.827;QD=22.72;ReadPosRankSum=2.066;VQSLOD=5.1659;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,3:49:22.44:0,22,1775	0/0:15,0:15:36.12:0,36,578	0/0:32,0:15:20.80:0,21,274	0/0:26,0:17:9.68:0,10,170	1/1:6,9:16:24.08:293,24,0	1/1:2,17:19:36.11:440,36,0	1/1:4,14:20:41.79:468,42,0	1/1:7,16:23:42.10:489,42,0	1/1:3,19:21:33.10:403,33,0	1/1:7,19:26:60.17:721,60,0	1/1:4,16:21:35.94:417,36,0	1/1:4,18:23:47.98:564,48,0	1/1:2,25:27:69.22:843,69,0	1/1:4,10:15:26.92:307,27,0	0/0:12,0:12:33.11:0,33,535	1/1:6,13:19:30.09:367,30,0	0/0:29,3:32:35.59:0,36,1076	1/1:7,23:31:68.64:794,69,0	1/1:5,18:22:54.14:643,54,0	1/1:8,11:20:32.93:380,33,0	1/1:22,48:71:23.58:1038,24,0	1/1:7,15:22:36.11:440,36,0	1/1:4,28:32:66.21:806,66,0	1/1:0,33:33:84.26:1026,84,0	1/1:4,16:20:42.13:513,42,0	1/1:12,19:31:60.17:713,60,0	1/1:3,12:15:27.08:330,27,0	1/1:1,12:13:30.09:366,30,0
chr10	90954953	.	C	CT	1618.63	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=1.624;DP=507;FS=11.470;HRun=12;HaplotypeScore=86.0586;InbreedingCoeff=0.5325;MQ=69.33;MQ0=5;MQRankSum=-0.877;QD=5.89;ReadPosRankSum=-2.155;VQSLOD=0.7759;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:47.67:0,48,604	0/0:5,0:5:11.92:0,12,87	0/0:26,0:14:10.51:0,11,72	0/0:25,0:16:5.64:0,6,41	1/1:16,0:16:4.74:27,5,0	1/1:16,0:15:5.68:14,6,0	0/0:22,0:22:2.27:0,2,11	1/1:26,0:26:5.88:36,6,0	1/1:11,0:11:2.91:7,3,0	1/1:11,12:24:19.93:327,20,0	1/1:3,10:13:2.13:182,2,0	0/0:13,0:13:5.79:0,6,23	1/1:4,13:17:23.16:246,23,0	1/1:12,0:12:3.78:21,4,0	0/0:13,2:15:6.61:0,7,209	1/1:5,12:17:8.13:239,8,0	0/0:39,2:43:4.33:0,4,499	1/1:7,12:19:11.04:254,11,0	1/1:14,0:13:4.02:36,4,0	1/1:6,0:5:1.77:4,2,0	0/0:11,0:11:2.86:0,3,15	1/1:2,6:8:14.98:136,15,0	1/1:19,0:19:1.77:5,2,0	0/1:30,0:30:22.67:23,0,26	1/1:7,11:19:24.50:230,25,0	0/0:9,0:8:3.99:0,4,17	0/0:11,0:11:2.45:0,2,10	1/1:8,0:8:1.36:3,1,0
chr10	90954964	.	TTC	T	2662.66	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=2.712;DP=542;FS=2.770;HRun=0;HaplotypeScore=86.3655;InbreedingCoeff=0.8697;MQ=65.96;MQ0=14;MQRankSum=-3.718;QD=11.09;ReadPosRankSum=-5.608;VQSLOD=2.3355;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:99:0,122,1601	0/0:5,0:5:15.05:0,15,221	0/0:45,0:16:19.51:0,20,296	0/0:36,0:17:3.20:0,3,110	1/1:15,0:15:30.59:218,31,0	1/1:18,0:17:30.27:212,30,0	1/1:19,3:22:35.35:330,35,0	1/1:28,2:30:65.94:458,66,0	1/1:10,0:10:11.62:72,12,0	0/0:21,0:21:31.85:0,32,464	0/0:13,0:13:29.87:0,30,297	1/1:11,1:12:7.30:104,7,0	0/0:17,0:18:35.80:0,36,312	1/1:8,0:8:21.57:172,22,0	0/0:13,0:13:36.09:0,36,521	0/0:16,0:16:32.99:0,33,351	0/0:41,0:41:99:0,110,1494	0/0:20,0:20:19.94:0,20,353	1/1:20,0:19:38.18:283,38,0	1/1:6,1:6:14.76:105,15,0	1/1:11,1:12:5.12:109,5,0	0/0:12,0:12:31.05:0,31,283	1/1:15,0:15:20.65:117,21,0	1/1:41,1:42:57.66:524,58,0	0/0:16,0:16:30.99:0,31,293	1/1:10,0:9:11.07:113,11,0	0/1:11,0:11:5.16:14,0,5	1/1:8,0:8:8.74:51,9,0
chr10	90954965	.	TC	T	4642.87	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=0.988;DP=532;FS=14.967;HRun=1;HaplotypeScore=71.9415;InbreedingCoeff=0.9438;MQ=66.01;MQ0=15;MQRankSum=-3.345;QD=19.51;ReadPosRankSum=-5.089;VQSLOD=2.8003;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:99:0,106,1203	0/0:5,0:5:15.03:0,15,165	0/0:46,0:16:12.90:0,13,224	0/0:37,0:17:4.54:0,5,114	1/1:0,15:15:33.56:244,34,0	1/1:14,3:16:35.94:344,36,0	1/1:15,6:21:49.52:433,50,0	1/1:15,14:29:75.48:755,75,0	1/1:0,10:10:12.03:147,12,0	0/0:20,0:20:29.12:0,29,314	0/0:11,0:11:29.05:0,29,195	1/1:8,5:13:31.31:287,31,0	0/0:17,0:17:31.88:0,32,200	1/1:4,4:8:23.21:228,23,0	0/0:13,0:13:35.45:0,35,386	0/0:14,0:14:32.08:0,32,220	0/0:40,0:40:75.05:0,75,1085	0/0:18,0:18:18.02:0,18,214	1/1:17,1:17:40.44:308,40,0	1/1:6,1:6:17.91:156,18,0	1/1:11,1:12:21.65:159,22,0	0/0:13,0:13:33.61:0,34,224	1/1:2,13:15:23.49:211,23,0	1/1:27,15:42:95.13:1010,95,0	0/0:15,0:15:37.12:0,37,244	1/1:10,2:11:28.44:229,28,0	1/1:1,10:11:5.56:30,6,0	1/1:0,8:8:8.99:101,9,0
chr10	90955468	.	TA	T	6330.97	PASS	AC=28;AF=0.519;AN=54;BaseQRankSum=0.754;DP=387;FS=1.316;HRun=2;HaplotypeScore=82.2970;InbreedingCoeff=0.9807;MQ=73.89;MQ0=0;MQRankSum=-0.741;QD=31.03;ReadPosRankSum=-0.940;VQSLOD=4.2477;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.21:0,63,925	0/0:7,0:7:21.07:0,21,313	0/0:7,0:7:13.77:0,14,211	0/0:8,0:8:18.06:0,18,254	1/1:0,13:13:35.98:443,36,0	1/1:2,14:16:32.95:385,33,0	1/1:3,25:28:54.13:680,54,0	1/1:0,25:25:72.21:906,72,0	1/1:1,15:16:42.14:544,42,0	0/0:16,0:16:48.16:0,48,702	0/0:7,0:7:21.07:0,21,315	1/1:0,11:11:24.08:311,24,0	0/0:8,0:8:24.08:0,24,355	1/1:0,4:4:9.03:117,9,0	0/0:15,0:15:45.15:0,45,673	0/0:12,0:12:36.12:0,36,539	0/0:35,0:35:99:0,102,1494	0/0:19,0:19:54.18:0,54,803	1/1:0,8:8:24.08:307,24,0	1/1:1,10:11:23.93:253,24,0	1/1:1,20:21:53.96:674,54,0	0/0:12,0:12:33.11:0,33,493	./.	1/1:0,21:21:51.08:639,51,0	0/0:11,0:11:30:0,30,373	1/1:0,14:14:36.09:450,36,0	1/1:0,12:12:36.12:466,36,0	1/1:0,4:4:12.04:156,12,0
chr10	90955856	.	GC	G	10787.75	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=6.515;DP=621;FS=0.299;HRun=2;HaplotypeScore=108.8940;InbreedingCoeff=0.9933;MQ=77.60;MQ0=0;MQRankSum=-1.954;QD=33.19;ReadPosRankSum=2.229;VQSLOD=4.5931;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,1976	0/0:4,0:4:12.04:0,12,180	0/0:19,0:19:57.12:0,57,754	0/0:15,0:15:39.88:0,40,582	1/1:0,21:21:57.19:739,57,0	1/1:0,18:18:54.11:679,54,0	1/1:1,23:24:66.20:841,66,0	1/1:2,30:32:90.29:1167,90,0	1/1:1,18:19:51.17:659,51,0	0/0:29,0:29:87.27:0,87,1265	0/0:23,0:23:66.21:0,66,963	1/1:0,28:28:81.26:1040,81,0	0/0:23,0:23:66.22:0,66,985	1/1:2,8:10:21.07:272,21,0	0/0:26,0:26:78.20:0,78,1138	0/0:27,0:27:81.22:0,81,1168	0/0:21,0:21:57.19:0,57,849	0/0:21,0:21:57.15:0,57,828	1/1:0,18:18:54.13:681,54,0	1/1:1,20:21:51.04:620,51,0	1/1:1,36:37:90.23:1133,90,0	0/0:22,0:22:66.20:0,66,949	1/1:0,15:15:30.10:389,30,0	1/1:2,17:19:45.15:583,45,0	0/0:19,0:18:54.18:0,54,805	1/1:6,32:38:15.87:1158,16,0	1/1:1,12:13:36.05:445,36,0	1/1:4,8:12:33.06:382,33,0
chr10	90956249	.	A	ACT	4381.27	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=13.747;DP=463;FS=8.415;HRun=0;HaplotypeScore=126.5208;InbreedingCoeff=0.8767;MQ=90.54;MQ0=0;MQRankSum=-11.576;QD=32.70;ReadPosRankSum=1.776;VQSLOD=7.1424;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,129,2003	0/0:14,0:14:42.10:0,42,630	0/0:21,0:20:42.53:0,43,892	0/0:29,0:29:77.21:0,77,1187	1/1:4,0:4:8.92:96,9,0	1/1:10,0:10:30.10:402,30,0	1/1:8,0:8:24.06:307,24,0	1/1:9,0:9:27.08:400,27,0	1/1:14,1:15:36.11:488,36,0	0/0:26,0:26:75.21:0,75,1181	0/0:14,0:14:36.10:0,36,582	1/1:14,1:15:33.10:430,33,0	0/0:24,0:24:66.23:0,66,1076	1/1:9,0:9:27.07:348,27,0	0/0:21,0:21:63.20:0,63,1003	0/0:27,0:27:81.24:0,81,1244	0/0:16,0:16:45.15:0,45,730	0/0:31,0:31:93.24:0,93,1401	1/1:7,0:7:21.07:319,21,0	1/1:6,0:6:15.05:206,15,0	1/1:14,1:15:34.53:481,35,0	0/0:36,0:36:99:0,99,1500	1/1:3,0:3:6.02:89,6,0	1/1:6,2:8:15.03:170,15,0	0/0:23,0:23:66.23:0,66,1066	0/1:10,0:10:27.77:239,0,28	1/1:14,0:14:26.98:363,27,0	1/1:1,0:1:3.01:43,3,0
chr10	90956256	.	GGA	G	4290.73	PASS	AB=0.533;AC=29;AF=0.518;AN=56;BaseQRankSum=14.902;DP=449;FS=3.830;HRun=0;HaplotypeScore=121.2153;InbreedingCoeff=0.8646;MQ=89.51;MQ0=1;MQRankSum=-12.860;QD=34.33;ReadPosRankSum=3.003;VQSLOD=7.3132;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,2648	0/0:15,0:15:45.15:0,45,904	0/0:18,0:18:54.18:0,54,1036	0/0:27,0:27:74.41:0,74,1354	1/1:1,4:4:9.03:128,9,0	1/1:0,8:8:24.08:361,24,0	1/1:0,7:7:21.07:317,21,0	1/1:1,6:7:18.06:275,18,0	1/1:1,13:14:31.92:450,32,0	0/0:27,0:27:75.26:0,75,1488	0/0:17,0:17:39.11:0,39,753	1/1:2,14:16:35.89:511,36,0	0/0:25,0:25:72.25:0,72,1438	1/1:1,8:9:27.06:378,27,0	0/0:21,0:21:60.21:0,60,1210	0/0:28,0:28:84.29:0,84,1683	0/0:16,0:16:45.14:0,45,877	0/0:27,0:27:81.28:0,81,1646	1/1:0,7:7:21.07:324,21,0	1/1:2,6:8:17.65:231,18,0	1/1:1,12:12:31.35:447,31,0	0/0:37,0:37:90.28:0,90,1740	1/1:0,2:2:3.01:45,3,0	1/1:1,6:7:12.03:160,12,0	0/0:19,0:19:57.20:0,57,1157	0/1:1,7:8:39.77:251,0,40	1/1:0,13:13:24.07:367,24,0	1/1:0,1:1:3.01:46,3,0
chr10	90956260	.	G	GT	4002.31	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=16.278;DP=523;FS=3.310;HRun=1;HaplotypeScore=146.9446;InbreedingCoeff=0.8882;MQ=83.46;MQ0=1;MQRankSum=-13.304;QD=20.42;ReadPosRankSum=-0.110;VQSLOD=3.6775;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,1704	0/0:16,0:16:48.15:0,48,655	0/0:19,0:19:51.17:0,51,707	0/0:25,0:25:68.45:0,68,906	1/1:4,1:4:8.37:62,8,0	1/1:9,0:9:24:213,24,0	1/1:10,0:10:30.03:325,30,0	1/1:18,0:18:38.81:467,39,0	1/1:14,0:14:32.99:299,33,0	0/0:28,0:28:75.18:0,75,1000	0/0:17,0:17:36.12:0,36,502	1/1:20,1:21:38.69:351,39,0	0/0:24,0:24:69.23:0,69,960	1/1:11,1:12:29.94:277,30,0	0/0:21,0:21:63.19:0,63,863	0/0:30,0:30:84.27:0,84,1158	0/0:18,0:18:51.14:0,51,690	0/0:29,0:29:84.22:0,84,1132	1/1:19,0:18:49.97:538,50,0	1/1:7,3:10:21.02:209,21,0	1/1:23,1:23:39.07:389,39,0	0/0:35,0:35:84.27:0,84,1153	1/1:4,0:4:6.01:59,6,0	1/1:15,0:16:29.33:254,29,0	0/0:19,0:19:57.14:0,57,759	0/1:14,0:14:8.86:270,0,9	1/1:18,0:18:26.99:260,27,0	1/1:2,0:2:2.98:28,3,0
chr10	90956262	.	GA	G	4858.44	PASS	AB=0.519;AC=29;AF=0.518;AN=56;BaseQRankSum=13.525;DP=525;FS=5.267;HRun=1;HaplotypeScore=126.4347;InbreedingCoeff=0.8879;MQ=82.74;MQ0=1;MQRankSum=-13.280;QD=24.05;ReadPosRankSum=-0.635;VQSLOD=4.4765;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,117,1803	0/0:16,0:16:45.15:0,45,716	0/0:19,0:19:54.15:0,54,806	0/0:25,0:25:69.59:0,70,1049	1/1:2,4:5:9.03:110,9,0	1/1:0,9:9:24.08:306,24,0	1/1:0,11:11:29.97:326,30,0	1/1:0,18:18:45.11:538,45,0	1/1:0,14:14:33.10:416,33,0	0/0:27,0:27:78.18:0,78,1173	0/0:18,0:18:42.12:0,42,617	1/1:2,19:21:41.69:481,42,0	0/0:24,0:24:69.23:0,69,1089	1/1:1,11:12:30.05:353,30,0	0/0:21,0:21:63.20:0,63,983	0/0:29,0:29:87.19:0,87,1330	0/0:19,0:19:54.17:0,54,833	0/0:28,0:28:84.21:0,84,1276	1/1:0,20:19:57.15:707,57,0	1/1:4,7:11:21.02:236,21,0	1/1:1,23:23:34.76:426,35,0	0/0:34,0:34:84.28:0,84,1309	1/1:0,5:5:3.01:38,3,0	1/1:5,11:16:20.81:219,21,0	0/0:19,0:19:53.21:0,53,817	0/1:1,13:14:17.74:314,0,18	1/1:0,18:18:23.86:311,24,0	1/1:2,1:3:8.93:78,9,0
chr10	90956462	.	A	ATGTG	13482.70	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-9.812;DP=1082;FS=2.261;HRun=0;HaplotypeScore=447.4466;InbreedingCoeff=0.9888;MQ=47.25;MQ0=4;MQRankSum=-7.982;QD=26.86;ReadPosRankSum=2.371;VQSLOD=3.8029;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:99:0,106,1832	0/0:8,0:8:24.04:0,24,391	0/0:44,0:38:86.88:0,87,1391	0/0:42,0:31:72.23:0,72,1188	1/1:11,29:40:21.04:553,21,0	1/1:8,18:26:19.86:480,20,0	1/1:3,22:26:32.97:871,33,0	1/1:15,17:34:56.19:1296,56,0	1/1:9,26:35:27.08:585,27,0	0/0:78,0:77:99:0,193,3247	0/0:25,0:24:32.23:0,32,540	1/1:11,46:57:32.34:947,32,0	0/0:54,0:54:83.63:0,84,1444	1/1:16,23:39:8.99:237,9,0	0/0:59,0:59:99:0,156,2792	0/0:54,1:55:54.72:0,55,1152	0/0:35,0:35:99:0,99,1674	0/0:38,0:38:62.15:0,62,1330	1/1:3,17:20:47.98:1050,48,0	1/1:15,36:51:58.42:1797,58,0	1/1:6,36:43:20.54:554,21,0	0/0:62,0:62:99:0,100,1785	1/1:7,24:31:30.03:792,30,0	1/1:3,16:20:21.07:555,21,0	0/0:28,0:27:47.93:0,48,846	1/1:18,23:41:35.86:1935,36,0	1/1:3,18:21:30.57:770,31,0	1/1:3,14:17:38.72:1062,39,0
chr10	90956464	.	G	GTC	782.64	PASS	AB=0.969;AC=25;AF=0.446;AN=56;BaseQRankSum=15.013;DP=1081;FS=10.673;HRun=0;HaplotypeScore=470.3945;InbreedingCoeff=0.5799;MQ=48.31;MQ0=4;MQRankSum=-6.211;QD=1.59;ReadPosRankSum=4.862;VQSLOD=-0.0996;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:99:0,111,1640	0/0:8,0:8:24.07:0,24,343	0/0:47,0:39:77.28:0,77,1352	0/0:42,0:32:83.60:0,84,1195	1/1:37,4:41:9.50:28,10,0	1/1:25,0:25:12.32:50,12,0	1/1:26,0:26:8.77:26,9,0	0/1:37,0:35:99:116,0,109	1/1:34,1:35:18.14:64,18,0	0/0:81,0:80:99:0,189,2793	0/0:27,0:26:29.85:0,30,458	1/1:51,4:55:26.93:99,27,0	0/0:55,0:55:92.32:0,92,1305	1/1:34,5:39:6:17,6,0	0/0:60,0:60:99:0,168,2475	0/0:54,1:55:66.19:0,66,978	0/0:35,0:35:99:0,105,1531	0/0:38,0:38:81.40:0,81,1232	0/1:19,0:19:32.60:33,0,33	1/1:44,4:48:25.70:70,26,0	0/1:40,0:40:8.02:8,0,16	0/0:61,0:61:99:0,102,1538	0/1:28,2:30:11.14:11,0,32	1/1:20,0:20:8.36:22,8,0	0/0:30,0:29:48.60:0,49,735	0/1:35,4:39:77.35:261,0,77	1/1:20,1:21:23.87:135,24,0	1/1:17,0:17:2.63:45,3,0
chr10	90956530	.	ATG	A	4285.53	PASS	AB=0.752;AC=18;AF=0.321;AN=56;BaseQRankSum=11.065;DP=1184;FS=29.842;HRun=0;HaplotypeScore=677.3442;InbreedingCoeff=-0.4683;MQ=41.56;MQ0=7;MQRankSum=-12.555;QD=5.23;ReadPosRankSum=4.058;VQSLOD=0.0142;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:67,0:66:99:0,174,3135	0/0:16,0:16:45.15:0,45,869	0/0:45,0:38:99:0,105,1885	0/0:40,0:37:89.93:0,90,1539	0/0:25,16:41:14.77:0,15,233	0/1:27,10:37:85.83:86,0,307	0/1:16,9:25:22.26:22,0,263	0/1:33,13:46:99:333,0,1047	0/1:28,18:46:99:254,0,229	0/1:61,37:97:99:1271,0,2698	0/1:26,11:36:0.01:0,0,761	0/1:35,24:60:99:120,0,347	0/1:48,20:69:99:290,0,975	0/1:24,17:41:61.24:61,0,181	0/0:56,0:56:99:0,160,3046	0/1:47,26:73:99:304,0,1106	0/0:35,0:35:99:0,105,1988	0/0:28,1:29:14.63:0,15,717	0/1:20,7:26:99:238,0,457	0/1:24,12:37:19.57:20,0,207	0/0:14,2:16:8.76:0,9,75	0/1:30,32:62:99:307,0,686	0/1:26,8:34:99:107,0,132	0/0:14,5:19:6.02:0,6,88	0/1:13,18:30:99:162,0,248	0/1:46,17:63:99:565,0,1506	0/1:16,8:24:99:125,0,471	0/1:8,1:9:21.66:22,0,200
chr10	90956570	.	GT	G	1339.76	PASS	AB=0.825;AC=14;AF=0.250;AN=56;BaseQRankSum=14.101;DP=1111;FS=44.660;HRun=1;HaplotypeScore=528.0027;InbreedingCoeff=-0.3445;MQ=44.46;MQ0=6;MQRankSum=-12.677;QD=2.20;ReadPosRankSum=-2.330;VQSLOD=-0.6682;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,162,2533	0/0:15,0:15:42.14:0,42,662	0/0:48,0:28:80.05:0,80,1165	0/0:56,0:36:99:0,104,1455	0/0:28,5:33:14.48:0,14,241	0/1:31,7:37:52.35:52,0,183	0/0:34,8:41:48.72:0,49,780	0/1:45,6:50:44.76:45,0,1638	0/1:30,14:44:99:164,0,299	0/1:62,17:78:99:408,0,2417	0/0:21,6:27:44.48:0,44,719	0/1:36,23:59:99:137,0,203	0/1:45,9:54:99:157,0,1031	0/1:21,10:31:19.85:20,0,179	0/0:69,0:69:99:0,185,2953	0/1:35,12:47:73.57:74,0,836	0/0:41,0:41:99:0,118,1818	0/0:26,3:29:31.29:0,31,817	0/1:21,3:23:51.69:52,0,629	0/0:26,3:30:9.03:0,9,145	0/0:16,1:16:14.66:0,15,197	0/1:34,13:47:49.97:50,0,914	0/1:35,1:36:8.49:8,0,220	0/0:19,3:22:4.67:0,5,54	0/1:14,6:20:21.34:21,0,373	0/1:43,10:53:99:281,0,1567	0/1:22,5:27:24.46:24,0,664	0/0:8,1:9:11.87:0,12,191
chr10	90956586	.	ATG	A	638.61	PASS	AB=0.829;AC=9;AF=0.161;AN=56;BaseQRankSum=12.287;DP=1099;FS=39.125;HRun=0;HaplotypeScore=482.1126;InbreedingCoeff=-0.2027;MQ=44.93;MQ0=16;MQRankSum=-10.035;QD=1.55;ReadPosRankSum=-1.116;VQSLOD=0.3411;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:61,1:62:99:0,158,2801	0/0:13,0:13:39.13:0,39,712	0/0:56,0:23:57.18:0,57,1063	0/0:61,1:35:98.79:0,99,1539	0/0:26,5:31:14.24:0,14,290	0/0:33,6:38:17.37:0,17,263	0/0:32,6:37:50.98:0,51,935	0/1:44,5:47:80.30:80,0,1493	0/1:26,11:37:47.47:47,0,292	0/1:59,15:73:99:314,0,2515	0/0:23,5:28:55.03:0,55,1046	0/1:29,21:51:43:43,0,229	0/1:47,8:55:4.53:5,0,1251	0/0:22,9:31:12.04:0,12,232	0/0:62,0:62:99:0,170,3068	0/1:36,11:47:41.11:41,0,1070	0/0:41,0:41:99:0,118,2120	0/0:28,3:31:36.36:0,36,1044	0/1:24,3:21:36.84:37,0,648	0/0:29,2:31:12.25:0,12,187	0/0:18,1:18:10.54:0,11,130	0/0:42,10:51:99:0,102,1764	0/0:35,0:34:15.05:0,15,290	0/0:23,3:26:1.70:0,2,56	0/0:16,5:21:32.96:0,33,571	0/1:39,9:48:99:159,0,1202	0/1:18,5:23:49.48:49,0,460	0/0:9,1:10:18:0,18,236
chr10	90956600	.	C	CTG	6131.21	PASS	AB=0.926;AC=38;AF=0.679;AN=56;BaseQRankSum=-5.086;DP=1022;FS=4.377;HRun=0;HaplotypeScore=386.5204;InbreedingCoeff=0.6140;MQ=47.96;MQ0=12;MQRankSum=-2.008;QD=8.68;ReadPosRankSum=1.375;VQSLOD=3.8303;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:69,0:68:99:0,126,1443	0/0:12,0:12:24.06:0,24,273	0/0:54,0:28:53.49:0,53,565	0/0:56,0:34:45.43:0,45,439	1/1:30,0:30:5.98:48,6,0	1/1:29,0:29:1.70:22,2,0	1/1:39,0:38:16.02:114,16,0	1/1:39,0:37:9.84:74,10,0	1/1:31,0:31:5.50:37,5,0	1/1:28,38:66:75.83:1644,76,0	1/1:14,15:29:31.57:521,32,0	1/1:43,0:43:8.71:64,9,0	0/1:26,19:45:61.90:522,0,62	1/1:32,0:32:9.82:71,10,0	0/0:57,0:59:99:0,122,1419	1/1:19,21:41:28.04:556,28,0	0/0:34,1:35:18.61:0,19,683	1/1:16,21:37:48.16:759,48,0	0/1:20,0:15:4.43:12,0,4	0/0:30,0:30:2.44:0,2,15	0/1:25,0:24:0:1,0,0	1/1:20,28:48:5.79:1066,6,0	0/1:31,0:29:0:1,0,0	1/1:28,1:29:1.73:21,2,0	1/1:11,11:23:24.02:374,24,0	1/1:38,0:38:13.53:118,14,0	1/1:20,0:20:9.25:58,9,0	1/1:9,0:9:5.99:49,6,0
chr10	90956617	.	T	TGTGTGTGTGTGTGC	8998.63	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-0.478;DP=906;FS=9.058;HRun=0;HaplotypeScore=465.6045;InbreedingCoeff=0.9240;MQ=57.15;MQ0=8;MQRankSum=-6.502;QD=22.67;ReadPosRankSum=-7.933;VQSLOD=0.8794;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:65:99:0,142,4376	0/0:10,0:10:27.06:0,27,948	0/0:44,0:30:83.93:0,84,1659	0/0:43,0:29:62.90:0,63,1117	1/1:22,0:24:11.43:266,11,0	1/1:23,0:24:8.85:98,9,0	1/1:37,0:36:53.59:747,54,0	1/1:33,0:31:65.74:1042,66,0	1/1:26,0:26:18.76:346,19,0	0/0:53,0:53:17.66:0,18,1779	0/0:24,0:24:37.53:0,38,695	1/1:27,1:29:17.65:424,18,0	0/0:36,0:36:50.51:0,51,1053	1/1:35,0:35:34.43:674,34,0	0/0:56,0:56:99:0,123,4908	0/0:36,0:36:18.90:0,19,718	0/0:41,0:41:93.86:0,94,2803	0/0:36,0:36:2.40:0,2,963	1/1:25,0:24:49.14:731,49,0	1/1:30,0:30:35.36:580,35,0	1/1:20,0:20:15.37:174,15,0	0/0:43,0:42:92.75:0,93,1739	1/1:25,0:23:5.26:41,5,0	1/1:30,0:30:8.36:138,8,0	0/0:21,0:21:22.51:0,23,527	1/1:31,2:33:74.19:1893,74,0	1/1:14,0:15:34.03:1451,34,0	1/1:10,1:11:11.99:393,12,0
chr10	90957052	.	AC	A	11677.18	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=9.398;DP=589;FS=0.000;HRun=6;HaplotypeScore=84.6526;InbreedingCoeff=0.9929;MQ=83.37;MQ0=0;MQRankSum=-5.123;QD=28.00;ReadPosRankSum=1.630;VQSLOD=5.3194;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,111,1460	0/0:12,0:12:33.08:0,33,417	0/0:32,0:31:62.95:0,63,753	0/0:29,0:28:49.70:0,50,533	1/1:0,15:15:45.11:484,45,0	1/1:0,13:12:27.07:290,27,0	1/1:1,23:24:69.17:741,69,0	1/1:5,13:17:36.04:374,36,0	1/1:1,28:29:78.20:837,78,0	1/1:3,23:26:69.17:741,69,0	1/1:0,11:11:30.08:322,30,0	1/1:1,11:12:33.08:354,33,0	1/1:0,15:15:42.11:451,42,0	1/1:3,16:19:45.11:482,45,0	0/0:18,0:18:51.17:0,51,669	1/1:1,23:24:69.17:741,69,0	0/0:37,0:37:99:0,102,1333	1/1:1,20:21:57.14:612,57,0	1/1:2,20:22:57.12:602,57,0	1/1:0,13:13:39.10:419,39,0	1/1:2,29:31:78.20:838,78,0	1/1:0,20:20:54.14:580,54,0	1/1:0,6:6:12.03:129,12,0	1/1:4,22:25:60.15:644,60,0	1/1:2,19:21:57.14:612,57,0	1/1:1,21:21:60.08:619,60,0	1/1:1,19:20:51.13:548,51,0	1/1:0,9:9:24.06:257,24,0
chr10	90957178	.	GTGTCTC	G	3900.54	PASS	AB=0.526;AC=28;AF=0.500;AN=56;BaseQRankSum=8.340;DP=560;FS=4.688;HRun=0;HaplotypeScore=161.6271;InbreedingCoeff=0.8716;MQ=54.68;MQ0=10;MQRankSum=-4.160;QD=15.36;ReadPosRankSum=-3.199;VQSLOD=2.6170;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:69.22:0,69,1829	0/0:7,0:7:18.06:0,18,513	0/0:43,0:17:23.48:0,23,644	0/0:56,0:31:49.91:0,50,1133	1/1:2,19:21:2.90:35,3,0	1/1:5,17:22:14.49:212,14,0	1/1:6,16:21:8.73:187,9,0	1/1:4,16:20:45.08:670,45,0	1/1:7,9:16:15.03:238,15,0	0/0:23,0:23:60.02:0,60,1525	0/0:10,0:10:21.07:0,21,639	1/1:9,10:19:17.85:208,18,0	0/0:22,0:22:30.02:0,30,746	1/1:2,23:25:12.04:192,12,0	0/0:21,0:21:60.21:0,60,1780	0/0:19,0:19:33.10:0,33,856	0/0:20,0:20:54.19:0,54,1708	0/0:18,0:18:53.97:0,54,1180	1/1:15,1:16:38.74:485,39,0	1/1:8,2:10:5.97:69,6,0	0/1:0,13:13:0:0,0,0	0/0:21,0:21:42.14:0,42,1274	1/1:6,6:11:5.99:70,6,0	0/1:4,17:20:0.03:0,0,0	0/0:15,0:15:18.05:0,18,476	1/1:3,17:20:48.11:890,48,0	1/1:3,7:10:21:378,21,0	1/1:2,5:6:12.04:268,12,0
chr10	90957207	.	TCA	T	375.45	PASS	AB=0.977;AC=26;AF=0.565;AN=46;BaseQRankSum=7.360;DP=628;FS=10.132;HRun=0;HaplotypeScore=170.1447;InbreedingCoeff=0.2974;MQ=45.92;MQ0=50;MQRankSum=-6.173;QD=1.16;ReadPosRankSum=-0.869;VQSLOD=1.6856;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,2:28:4.30:0,4,489	0/0:7,0:7:11.63:0,12,149	./.	0/0:100,0:19:5.83:0,6,38	0/1:19,0:19:0:0,0,0	1/1:17,0:15:3.27:14,3,0	1/1:21,0:20:2.79:13,3,0	0/0:14,0:13:5.97:0,6,47	1/1:21,0:21:19.95:90,20,0	1/1:27,0:27:8.44:48,8,0	./.	1/1:17,0:17:7.91:33,8,0	1/1:21,0:21:14.08:67,14,0	1/1:27,0:26:2.80:13,3,0	0/1:23,1:24:22.02:22,0,524	0/1:24,0:24:4.15:60,0,4	0/1:24,5:29:50.85:51,0,582	0/1:11,0:11:9.17:9,0,13	0/0:10,0:10:3.37:0,3,17	0/1:6,0:6:0:0,0,0	./.	./.	./.	0/1:20,0:19:0:0,0,0	1/1:18,0:18:2.80:13,3,0	0/0:18,0:18:2.97:0,3,20	1/1:18,0:18:16.68:76,17,0	0/1:4,0:4:0.05:0,0,0
chr10	90957221	.	ACACACACACACACG	A	2002.53	PASS	AB=0.991;AC=25;AF=0.463;AN=54;BaseQRankSum=5.545;DP=650;FS=2.661;HRun=0;HaplotypeScore=229.8109;InbreedingCoeff=-0.0741;MQ=42.68;MQ0=45;MQRankSum=-4.252;QD=4.86;ReadPosRankSum=-0.411;VQSLOD=2.0322;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:51.07:0,51,2073	0/0:7,0:7:18.03:0,18,903	1/1:49,0:2:2.22:7,2,0	0/0:87,0:6:1.47:0,1,155	0/0:15,0:15:2.41:0,2,15	0/1:19,0:17:33.35:33,0,101	0/1:24,0:23:79.99:80,0,156	0/1:19,0:17:8.42:8,0,310	0/1:23,0:23:35.91:36,0,79	0/1:35,0:35:43.10:579,0,43	./.	1/1:19,0:19:8.22:57,8,0	1/1:22,2:24:15.52:441,16,0	0/1:24,0:22:17.35:17,0,77	0/0:33,0:32:75.23:0,75,3527	1/1:22,0:22:22.32:513,22,0	0/0:31,0:31:69.21:0,69,3394	0/1:12,1:13:99:138,0,177	0/1:16,0:13:16.54:17,0,111	0/0:10,0:10:0:0,0,0	0/1:19,0:19:15.93:16,0,70	0/1:21,1:22:0:0,0,0	0/0:17,0:17:5.60:0,6,141	1/1:19,0:17:2.01:6,2,0	1/1:19,0:19:6.02:98,6,0	0/1:20,0:19:42.10:42,0,240	0/1:20,0:20:60.36:60,0,62	0/1:6,0:5:10.94:11,0,47
chr10	90957223	.	ACACACACACACG	A	3437.51	PASS	AB=0.957;AC=33;AF=0.611;AN=54;BaseQRankSum=5.694;DP=649;FS=5.076;HRun=0;HaplotypeScore=210.9069;InbreedingCoeff=0.1104;MQ=42.99;MQ0=44;MQRankSum=-4.657;QD=7.57;ReadPosRankSum=-1.854;VQSLOD=1.5055;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:54.02:0,54,1793	0/0:7,0:7:18.03:0,18,777	1/1:50,0:2:2.50:9,2,0	0/0:87,0:6:1.27:0,1,116	1/1:13,0:13:5.59:35,6,0	1/1:20,0:18:3.71:129,4,0	0/1:25,1:25:65.77:162,0,66	0/1:20,0:18:71.33:71,0,104	0/1:22,0:22:3.35:79,0,3	1/1:5,31:36:2.99:879,3,0	./.	1/1:20,0:20:8.40:53,8,0	1/1:5,19:24:18.06:539,18,0	0/1:22,0:20:11.79:12,0,27	0/0:32,0:31:74.76:0,75,2942	1/1:4,19:23:24.08:726,24,0	0/0:31,0:31:69.15:0,69,2868	0/1:12,0:12:5.48:176,0,5	0/1:16,0:13:47.87:48,0,50	0/1:10,0:10:0:0,0,0	1/1:18,0:18:3:25,3,0	0/1:4,15:19:0:0,0,0	0/1:17,0:17:11.09:11,0,72	1/1:20,0:18:3.20:25,3,0	1/1:2,18:20:6.02:188,6,0	0/1:20,0:19:45.65:85,0,46	1/1:20,0:20:10.89:150,11,0	0/1:6,0:5:18.47:34,0,18
chr10	90957225	.	ACACACACACG	A	3994.61	PASS	AB=0.994;AC=40;AF=0.741;AN=54;BaseQRankSum=6.479;DP=642;FS=1.125;HRun=0;HaplotypeScore=194.7827;InbreedingCoeff=0.5125;MQ=42.00;MQ0=45;MQRankSum=-5.621;QD=7.49;ReadPosRankSum=-3.715;VQSLOD=2.0997;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:54.02:0,54,1519	0/0:7,0:7:18.03:0,18,652	1/1:48,0:1:2.60:10,3,0	0/1:85,0:6:5.52:6,0,51	1/1:14,0:14:9:98,9,0	1/1:18,2:18:20.45:222,20,0	0/1:26,1:26:5.63:215,0,6	1/1:18,0:16:15.83:187,16,0	1/1:21,0:21:20.10:241,20,0	1/1:36,0:36:29.58:742,30,0	./.	1/1:19,0:19:9.03:133,9,0	1/1:24,0:24:17.99:391,18,0	1/1:19,0:17:8.04:73,8,0	0/0:32,0:31:54.27:0,54,2371	1/1:22,1:23:24.03:516,24,0	0/0:32,0:32:72.13:0,72,2390	1/1:12,0:12:29.86:279,30,0	0/1:18,0:14:2.81:78,0,3	0/1:10,0:10:0:0,0,0	1/1:19,0:19:8.97:71,9,0	0/1:17,0:17:0:0,0,0	0/1:17,0:17:11.17:11,0,25	1/1:20,0:18:3.46:25,3,0	1/1:20,0:20:6.02:123,6,0	1/1:20,0:19:32.68:236,33,0	1/1:19,1:20:19.64:276,20,0	1/1:6,0:5:8.40:62,8,0
chr10	90957227	.	ACACACACG	A	4646.36	PASS	AB=1.000;AC=42;AF=0.778;AN=54;BaseQRankSum=7.104;DP=629;FS=3.287;HRun=0;HaplotypeScore=177.3880;InbreedingCoeff=0.7176;MQ=42.25;MQ0=43;MQRankSum=-6.342;QD=9.20;ReadPosRankSum=-3.704;VQSLOD=3.2539;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:54.02:0,54,1249	0/0:7,0:7:18.01:0,18,516	1/1:46,0:1:2.68:11,3,0	0/1:81,0:6:2.46:2,0,34	1/1:11,3:14:8.99:75,9,0	1/1:20,0:18:20.76:228,21,0	1/1:25,1:25:25.38:252,25,0	1/1:18,0:16:38.64:274,39,0	1/1:7,14:21:24.02:532,24,0	1/1:35,0:35:55.35:685,55,0	./.	1/1:6,11:17:9.03:238,9,0	1/1:24,0:24:17.99:322,18,0	1/1:16,3:17:9.02:156,9,0	0/0:32,0:31:35.36:0,35,1846	1/1:23,0:23:24.03:417,24,0	0/0:32,0:32:74.13:0,74,1948	1/1:12,0:12:29.86:265,30,0	1/1:18,0:14:15.42:117,15,0	0/1:10,0:10:0:0,0,0	1/1:20,0:20:14.93:116,15,0	0/0:17,0:17:0.47:0,0,1	1/1:16,1:17:8.65:51,9,0	1/1:19,1:18:3.46:25,3,0	1/1:19,0:19:6.02:95,6,0	1/1:18,0:17:35.64:256,36,0	1/1:9,11:20:23.57:447,24,0	1/1:6,0:5:11.87:82,12,0
chr10	90957235	.	GCA	G	317.73	PASS	AB=0.992;AC=26;AF=0.500;AN=52;BaseQRankSum=8.656;DP=605;FS=4.764;HRun=0;HaplotypeScore=153.8056;InbreedingCoeff=0.3745;MQ=42.40;MQ0=36;MQRankSum=-5.506;QD=0.98;ReadPosRankSum=4.099;VQSLOD=2.1628;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:29:35.71:0,36,496	0/0:7,0:7:15.05:0,15,228	0/0:45,0:3:2.97:0,3,20	0/0:69,0:11:17.41:0,17,123	1/1:13,0:13:0.92:2,1,0	0/1:19,0:17:7.49:7,0,15	0/1:22,0:21:4.40:8,0,4	0/0:23,0:21:7.86:0,8,53	1/1:20,0:20:19.48:89,19,0	1/1:33,0:33:5.79:45,6,0	./.	1/1:14,0:14:7.91:33,8,0	1/1:21,0:22:13.99:66,14,0	1/1:18,0:16:2.27:12,2,0	0/1:28,2:30:36.38:36,0,789	0/1:23,0:23:3.78:62,0,4	0/0:31,2:33:1.40:0,1,797	1/1:13,0:13:1.72:11,2,0	0/0:20,0:16:5.14:0,5,30	0/1:10,0:10:0:0,0,0	./.	0/1:16,0:16:0:0,0,0	0/1:17,0:17:0.72:1,0,2	0/1:17,0:15:0:0,0,0	1/1:19,0:19:2.43:12,2,0	0/0:18,0:16:7.37:0,7,59	1/1:18,0:18:16.31:76,16,0	0/0:7,0:6:0.47:0,0,1
chr10	90957779	.	T	TAG	4859.60	PASS	AB=0.800;AC=29;AF=0.518;AN=56;BaseQRankSum=12.857;DP=345;FS=16.088;HRun=0;HaplotypeScore=113.5231;InbreedingCoeff=0.8812;MQ=59.63;MQ0=3;MQRankSum=-11.911;QD=45.00;ReadPosRankSum=-2.254;VQSLOD=4.0670;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1736	0/0:12,0:12:36.12:0,36,550	0/0:12,0:8:22.61:0,23,295	0/0:11,0:6:15.05:0,15,221	1/1:11,1:12:24.08:430,24,0	1/1:10,2:12:33.11:567,33,0	1/1:3,0:3:9.03:148,9,0	1/1:12,0:12:36.12:629,36,0	1/1:7,0:7:21.07:349,21,0	0/0:22,0:22:63.20:0,63,928	0/0:22,0:22:63.20:0,63,945	1/1:8,0:8:21.06:330,21,0	0/0:7,0:7:18.06:0,18,276	1/1:2,0:2:6.02:105,6,0	0/0:18,0:18:45.15:0,45,689	0/0:9,0:9:24.08:0,24,367	0/0:33,0:33:81.27:0,81,1236	0/0:24,0:24:66.18:0,66,973	1/1:10,0:10:27.08:449,27,0	1/1:8,0:8:24.07:408,24,0	1/1:3,0:3:9.03:149,9,0	0/0:7,0:6:18.05:0,18,255	1/1:5,0:5:15.04:229,15,0	1/1:9,0:9:15.52:287,16,0	0/0:21,0:21:57.17:0,57,830	0/1:6,2:8:25.12:292,0,25	1/1:5,0:5:15.05:264,15,0	1/1:4,0:4:12.04:223,12,0
chr10	90957833	.	C	CAA	2819.23	PASS	AC=14;AF=0.538;AN=26;BaseQRankSum=-6.019;DP=310;FS=3.767;HRun=10;HaplotypeScore=73.0242;InbreedingCoeff=0.9056;MQ=56.45;MQ0=33;MQRankSum=-0.968;QD=25.86;ReadPosRankSum=-0.461;VQSLOD=3.5919;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:43.39:0,43,652	0/0:11,0:10:27.06:0,27,273	0/0:54,0:8:7.34:0,7,169	0/0:50,0:9:3.32:0,3,69	./.	./.	./.	./.	./.	1/1:4,9:13:23.05:286,23,0	1/1:3,13:17:36.07:483,36,0	./.	1/1:1,7:9:12.04:179,12,0	./.	0/0:18,0:18:45.09:0,45,452	1/1:1,6:7:12.04:179,12,0	0/0:27,0:28:60.09:0,60,594	1/1:5,23:30:68.20:955,68,0	./.	./.	./.	1/1:1,7:9:20.65:254,21,0	./.	./.	1/1:3,16:21:44.63:619,45,0	./.	./.	./.
chr10	90957846	.	CA	C	840.73	PASS	AC=4;AF=0.143;AN=28;BaseQRankSum=-2.739;DP=310;FS=0.734;HRun=7;HaplotypeScore=67.4393;InbreedingCoeff=0.7948;MQ=60.27;MQ0=30;MQRankSum=-0.028;QD=17.16;ReadPosRankSum=3.642;VQSLOD=3.5625;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:87.04:0,87,980	0/0:10,0:9:21.07:0,21,264	0/0:65,0:11:30.99:0,31,285	0/0:53,0:12:1.68:0,2,141	./.	./.	./.	./.	./.	0/0:11,0:9:24.08:0,24,297	0/0:12,0:12:27.08:0,27,334	./.	0/0:10,0:10:21.02:0,21,239	./.	1/1:2,17:19:39.09:398,39,0	0/0:6,0:6:12.04:0,12,150	1/1:2,28:30:54.12:550,54,0	0/0:28,0:28:72.23:0,72,894	./.	./.	./.	0/0:11,0:10:27.06:0,27,316	./.	./.	0/0:21,0:21:54.16:0,54,659	0/0:1,0:1:2.97:0,3,20	./.	./.
chr10	90958019	.	G	GT	516.85	PASS	AB=0.954;AC=39;AF=0.696;AN=56;BaseQRankSum=6.449;DP=459;FS=3.533;HRun=12;HaplotypeScore=118.0081;InbreedingCoeff=-0.0435;MQ=72.17;MQ0=8;MQRankSum=-3.548;QD=1.40;ReadPosRankSum=-3.466;VQSLOD=-0.3208;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:39:36:0,36,503	0/1:6,1:7:11.52:12,0,80	0/1:35,0:20:26.88:27,0,45	0/1:36,0:19:17.16:17,0,42	1/1:13,0:13:8.16:31,8,0	1/1:9,0:8:1.52:17,2,0	1/1:18,0:18:3.58:14,4,0	1/1:23,0:23:4.94:12,5,0	1/1:10,0:10:1.34:4,1,0	0/1:22,1:22:81.07:81,0,130	0/1:13,1:14:58.89:59,0,61	0/1:10,0:10:5.78:10,0,6	0/1:9,0:9:5.27:5,0,35	1/1:4,0:4:0.47:1,0,0	0/1:11,1:12:2.32:2,0,148	0/1:12,0:12:40.76:41,0,86	0/0:38,1:40:29.45:0,29,535	0/0:11,0:12:6.50:0,7,87	1/1:18,0:17:2.74:16,3,0	1/1:14,0:13:4.62:30,5,0	1/1:4,0:4:2.99:23,3,0	0/1:8,1:8:27:27,0,33	1/1:6,0:5:4.49:27,4,0	1/1:13,0:13:3.76:24,4,0	0/1:18,1:19:47.15:47,0,135	1/1:27,0:26:24.11:121,24,0	1/1:15,0:15:0.48:2,0,0	1/1:4,0:4:3.37:17,3,0
chr10	90958026	.	T	TG	299.44	PASS	AB=0.732;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.415;DP=499;FS=3.684;HRun=0;HaplotypeScore=114.2380;InbreedingCoeff=-0.1159;MQ=64.30;MQ0=12;MQRankSum=-2.894;QD=2.70;ReadPosRankSum=2.884;VQSLOD=3.0485;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,115,1354	0/0:7,0:7:16.71:0,17,212	0/0:44,0:20:31.24:0,31,239	0/0:47,0:19:22.72:0,23,233	0/0:11,0:11:27.61:0,28,171	0/0:10,0:9:18.30:0,18,136	0/0:18,0:18:44.03:0,44,307	0/0:24,0:24:56.43:0,56,394	0/0:13,0:13:32.85:0,33,261	0/1:15,7:21:99:160,0,370	0/1:10,5:15:57.44:57,0,220	0/0:9,0:9:26.27:0,26,206	0/1:2,0:15:7.56:8,0,75	0/0:3,0:3:3:0,3,27	0/0:13,0:13:26.38:0,26,407	0/1:7,7:15:23.85:24,0,204	0/0:37,0:37:99:0,100,1283	0/1:11,3:13:11.11:11,0,236	0/0:19,0:18:47.26:0,47,352	0/0:14,0:13:30.89:0,31,213	0/0:4,0:3:1.55:0,2,5	0/1:7,3:9:89.32:89,0,135	0/0:7,0:6:16.01:0,16,110	0/0:16,0:16:24.53:0,25,167	0/1:16,4:19:75.92:76,0,357	0/0:29,0:28:59.95:0,60,407	0/0:15,0:15:35.80:0,36,278	0/0:6,0:5:11.85:0,12,79
chr10	90958031	.	TG	T	3068.34	PASS	AB=0.918;AC=33;AF=0.589;AN=56;BaseQRankSum=6.969;DP=491;FS=4.182;HRun=1;HaplotypeScore=101.9503;InbreedingCoeff=0.7071;MQ=59.82;MQ0=12;MQRankSum=-4.886;QD=11.67;ReadPosRankSum=-5.571;VQSLOD=-0.1524;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:95.09:0,95,927	0/0:7,0:7:15.54:0,16,135	0/1:43,2:18:10.08:10,0,137	0/0:43,4:18:9.06:0,9,85	1/1:11,0:11:29.61:182,30,0	1/1:10,0:9:18.76:122,19,0	1/1:18,1:19:47.50:343,48,0	1/1:22,1:23:51.69:351,52,0	1/1:11,2:13:35.86:289,36,0	0/0:21,1:21:13.73:0,14,381	0/0:16,0:16:30.34:0,30,304	1/1:8,1:9:23.62:177,24,0	0/0:14,0:14:8.01:0,8,53	1/1:3,0:3:3:27,3,0	0/0:12,0:12:32.93:0,33,332	0/1:14,2:16:20.61:21,0,173	0/0:37,0:37:98.53:0,99,1005	0/0:15,0:14:16.58:0,17,138	1/1:18,1:18:48.19:353,48,0	1/1:13,1:13:35.77:270,36,0	1/1:4,0:3:5.96:43,6,0	0/1:9,1:9:38.78:39,0,116	1/1:7,0:6:17.93:144,18,0	1/1:14,1:15:24.63:177,25,0	0/0:18,1:18:10.19:0,10,281	1/1:27,1:27:59.74:464,60,0	1/1:10,1:11:26.83:207,27,0	1/1:6,0:5:10.41:61,10,0
chr10	90958037	.	TG	T	2694.45	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=8.107;DP=475;FS=0.855;HRun=1;HaplotypeScore=101.4896;InbreedingCoeff=0.6794;MQ=57.58;MQ0=12;MQRankSum=-5.327;QD=12.30;ReadPosRankSum=-7.220;VQSLOD=-0.6166;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:98.55:0,99,1204	0/0:7,0:7:21.01:0,21,255	0/0:45,1:14:29.53:0,30,258	0/0:51,0:22:1.34:0,1,117	1/1:10,0:10:23.25:144,23,0	1/1:10,0:9:18.41:119,18,0	1/1:18,1:19:47.51:333,48,0	1/1:23,1:24:46.48:357,46,0	1/1:12,1:13:35.81:275,36,0	0/1:23,0:22:18.69:19,0,359	0/0:18,0:18:45.62:0,46,426	1/1:9,0:9:21.61:160,22,0	0/0:8,0:8:3:0,3,29	1/1:3,0:3:3:27,3,0	0/0:12,0:12:33.11:0,33,452	0/0:17,0:17:16.49:0,16,207	0/0:36,0:36:99:0,102,1251	0/0:14,0:13:3.02:0,3,196	1/1:17,1:17:44.62:332,45,0	1/1:10,1:11:29.77:217,30,0	1/1:3,0:2:2.97:20,3,0	0/0:9,0:8:1.79:0,2,183	1/1:5,0:4:11.84:83,12,0	1/1:13,1:14:18.65:132,19,0	0/1:16,0:15:32.74:33,0,215	1/1:24,0:23:50.72:381,51,0	1/1:10,1:11:26.83:204,27,0	1/1:6,0:5:10.12:61,10,0
chr10	90959217	.	G	GA	6819.38	PASS	AB=0.643;AC=29;AF=0.518;AN=56;BaseQRankSum=8.623;DP=515;FS=0.720;HRun=1;HaplotypeScore=135.2965;InbreedingCoeff=0.9191;MQ=78.84;MQ0=0;MQRankSum=-3.472;QD=24.18;ReadPosRankSum=0.708;VQSLOD=4.7751;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.26:0,78,1089	0/0:11,0:11:33.11:0,33,459	0/0:10,0:10:29.47:0,29,338	0/0:21,0:21:48.13:0,48,633	1/1:1,24:25:63.05:590,63,0	1/1:1,18:19:54.05:513,54,0	1/1:3,24:27:75.09:737,75,0	1/1:7,11:18:36.05:378,36,0	1/1:3,9:12:27.51:251,28,0	0/0:14,0:14:39.09:0,39,521	0/0:7,0:7:21.07:0,21,291	1/1:2,21:23:65.96:591,66,0	0/0:18,0:18:51.17:0,51,703	1/1:2,8:10:26.94:245,27,0	0/0:30,0:30:90.30:0,90,1254	0/0:21,0:21:60.20:0,60,837	0/0:19,0:19:57.16:0,57,775	0/0:21,0:21:60.20:0,60,835	1/1:3,9:12:24.06:260,24,0	1/1:6,14:20:51.01:468,51,0	1/1:4,50:54:99:1483,147,0	0/0:17,0:17:45.15:0,45,627	1/1:0,10:10:30:279,30,0	1/1:4,24:28:54.06:523,54,0	0/0:17,0:17:51.17:0,51,712	0/1:4,5:9:33.96:141,0,34	1/1:2,10:12:28.36:272,28,0	1/1:0,3:3:9.02:89,9,0
chr10	90959219	.	C	CA	6861.82	PASS	AB=0.823;AC=30;AF=0.536;AN=56;BaseQRankSum=8.285;DP=524;FS=0.706;HRun=0;HaplotypeScore=136.4184;InbreedingCoeff=0.8017;MQ=77.61;MQ0=0;MQRankSum=-1.206;QD=22.87;ReadPosRankSum=-0.079;VQSLOD=5.5161;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:74.91:0,75,406	0/0:11,0:11:32.11:0,32,193	0/0:9,0:9:25.33:0,25,164	0/0:21,0:21:21.21:0,21,262	1/1:1,24:25:63.04:589,63,0	1/1:1,18:19:57.04:537,57,0	1/1:4,24:28:78.09:762,78,0	0/1:9,11:20:29.45:401,0,29	1/1:3,9:12:4.96:264,5,0	0/1:15,0:15:15.13:15,0,106	0/0:8,0:8:20.15:0,20,111	1/1:2,21:23:43.10:550,43,0	0/0:19,0:19:49.24:0,49,281	1/1:2,8:10:26.95:246,27,0	0/0:30,0:30:86.07:0,86,464	0/0:22,0:22:57.55:0,58,319	0/0:19,0:19:54.47:0,54,288	0/0:22,0:22:56.99:0,57,294	1/1:3,9:12:2.56:258,3,0	1/1:4,15:19:28.04:402,28,0	1/1:4,50:54:99:1506,150,0	0/0:19,0:19:46.73:0,47,286	1/1:0,10:10:30:279,30,0	1/1:5,24:29:16.24:499,16,0	0/0:17,0:17:49.04:0,49,275	1/1:3,5:9:13.53:184,14,0	1/1:2,10:12:31.83:280,32,0	1/1:0,3:3:9.02:89,9,0
chr10	90960418	.	TAC	T	115.74	PASS	AB=0.885;AC=6;AF=0.120;AN=50;BaseQRankSum=0.867;DP=725;FS=1.022;HRun=0;HaplotypeScore=144.9529;InbreedingCoeff=0.1924;MQ=54.04;MQ0=14;MQRankSum=2.520;QD=1.50;ReadPosRankSum=2.931;VQSLOD=1.9303;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:45,7:54:99:183,0,621	0/1:8,1:9:16.79:17,0,193	0/0:48,0:19:24.08:0,24,348	0/0:66,0:30:20.61:0,21,286	1/1:9,0:5:1.82:5,2,0	./.	0/0:34,0:30:6.44:0,6,62	0/0:20,0:19:21.01:0,21,249	0/0:28,0:25:4.46:0,4,20	0/0:44,1:45:49.38:0,49,1089	0/0:12,0:12:24.08:0,24,371	0/0:28,0:23:3.56:0,4,24	0/0:26,0:26:42.14:0,42,649	0/0:14,0:12:2.98:0,3,30	0/0:36,1:36:16.33:0,16,689	0/0:29,0:29:36.12:0,36,550	0/0:39,2:42:5.28:0,5,1188	0/0:31,0:31:60.16:0,60,906	0/0:13,0:12:20.85:0,21,168	1/1:5,0:4:0.47:1,0,0	./.	0/0:28,0:28:30.10:0,30,456	./.	0/0:39,0:36:3:0,3,44	0/0:18,0:18:42.14:0,42,644	0/0:23,0:21:27.33:0,27,230	0/0:9,0:8:2.90:0,3,16	0/0:2,0:1:1.25:0,1,3
chr10	90960445	.	AGTG	A	1150.65	PASS	AB=0.806;AC=11;AF=0.204;AN=54;BaseQRankSum=4.770;DP=950;FS=18.664;HRun=0;HaplotypeScore=238.2101;InbreedingCoeff=-0.1259;MQ=43.87;MQ0=44;MQRankSum=-3.852;QD=4.44;ReadPosRankSum=1.122;VQSLOD=1.3022;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:55:99:0,108,2331	0/0:9,0:9:21:0,21,445	0/0:97,0:21:54.51:0,55,1036	0/0:101,0:31:63.20:0,63,1308	1/1:2,0:3:3.01:54,3,0	0/0:16,2:14:5.93:0,6,90	0/1:28,13:32:83.39:83,0,263	0/1:34,5:36:99:159,0,1631	0/1:24,6:30:59.90:150,0,60	0/0:43,0:42:99:0,117,2823	0/0:12,0:12:23.92:0,24,587	0/1:21,10:29:99:194,0,203	0/0:31,1:32:66.23:0,66,1511	0/1:11,6:15:47.29:47,0,136	0/0:44,1:44:68.91:0,69,1560	0/0:35,0:35:63.22:0,63,1478	0/0:45,2:47:69.05:0,69,2868	0/0:33,0:33:90.31:0,90,2151	0/1:22,5:23:99:144,0,909	0/1:18,0:17:40.56:41,0,174	0/0:56,5:54:26.89:0,27,513	0/0:24,0:24:30.10:0,30,727	0/0:5,0:4:2.79:0,3,39	0/0:34,4:39:2.91:0,3,43	0/0:26,0:25:66.17:0,66,1470	0/1:23,2:25:99:380,0,621	0/1:7,2:9:40.79:41,0,275	./.
chr10	90960446	.	GTGC	G	634.14	PASS	AB=0.964;AC=11;AF=0.204;AN=54;BaseQRankSum=6.598;DP=958;FS=21.130;HRun=0;HaplotypeScore=246.0110;InbreedingCoeff=-0.1248;MQ=43.78;MQ0=45;MQRankSum=-3.958;QD=2.38;ReadPosRankSum=1.145;VQSLOD=0.7867;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,105,2340	0/0:8,0:8:21:0,21,449	0/0:96,0:21:54.93:0,55,1031	0/0:100,0:31:60.11:0,60,1276	1/1:7,1:4:3.01:47,3,0	0/0:20,0:14:5.93:0,6,91	0/1:41,0:32:46.04:46,0,272	0/1:42,0:39:51.18:51,0,1833	0/1:35,0:32:61.38:100,0,61	0/0:44,0:43:99:0,123,2934	0/0:12,0:12:23.92:0,24,571	0/1:35,0:29:99:108,0,231	0/0:32,0:32:66.16:0,66,1433	0/1:22,0:17:23.31:23,0,137	0/0:46,0:45:68.66:0,69,1511	0/0:34,0:34:63.17:0,63,1453	0/0:47,0:48:99:0,108,3042	0/0:33,0:33:90.27:0,90,2131	0/1:26,0:23:64.95:65,0,957	0/1:15,5:17:17.62:18,0,198	0/0:61,1:55:27.09:0,27,537	0/0:24,0:24:30.10:0,30,728	0/0:5,1:4:2.79:0,3,41	0/0:44,0:40:2.91:0,3,49	0/0:25,0:24:60.16:0,60,1406	0/1:24,4:25:99:298,0,742	0/1:9,0:8:21.84:22,0,278	./.
chr10	90960451	.	CAT	C	74.57	PASS	AB=0.987;AC=6;AF=0.111;AN=54;BaseQRankSum=6.859;DP=994;FS=22.625;HRun=0;HaplotypeScore=257.3654;InbreedingCoeff=0.0608;MQ=42.86;MQ0=44;MQRankSum=-4.800;QD=0.55;ReadPosRankSum=-0.192;VQSLOD=1.2255;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:88.59:0,89,1627	0/0:10,0:10:21.42:0,21,327	0/0:91,0:18:41.01:0,41,612	0/0:104,0:35:31.98:0,32,824	1/1:9,0:6:2.99:23,3,0	0/0:21,0:15:8.68:0,9,51	0/0:43,0:33:1.13:0,1,143	0/0:46,0:42:32.18:0,32,1174	0/1:35,1:33:12.32:18,0,12	0/0:49,0:48:65.65:0,66,626	0/0:15,0:15:2.37:0,2,77	0/1:38,1:32:13.75:68,0,14	0/0:32,0:32:0.35:0,0,88	0/0:25,1:21:7.96:0,8,46	0/0:47,0:46:58.88:0,59,1020	0/0:34,0:34:46.07:0,46,287	0/0:48,1:49:59.35:0,59,2208	0/0:33,0:33:50:0,50,412	0/0:26,0:22:28.38:0,28,441	0/1:22,0:19:12.59:13,0,36	0/0:63,1:57:11.79:0,12,201	0/0:25,0:25:20.64:0,21,188	0/0:7,0:5:3.27:0,3,14	0/0:44,1:40:2.74:0,3,12	0/0:26,0:25:32.50:0,33,172	0/1:30,0:27:67.29:67,0,105	0/0:8,0:7:10.75:0,11,99	./.
chr10	90960455	.	GAC	G	6787.67	PASS	AB=0.760;AC=33;AF=0.611;AN=54;BaseQRankSum=0.851;DP=1031;FS=2.804;HRun=0;HaplotypeScore=244.4765;InbreedingCoeff=0.1295;MQ=41.07;MQ0=47;MQRankSum=-2.500;QD=9.89;ReadPosRankSum=0.683;VQSLOD=4.4476;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,1:50:43.69:0,44,1203	0/1:10,1:11:10.23:10,0,278	0/0:92,0:17:29.80:0,30,383	0/0:103,1:32:38.51:0,39,550	1/1:9,2:8:5.97:56,6,0	0/1:12,2:16:36.24:42,0,36	0/1:29,5:36:53.92:116,0,54	0/1:36,7:45:99:243,0,508	0/1:25,6:35:9.07:56,0,9	1/1:9,40:48:99:1513,123,0	1/1:3,15:18:24.04:281,24,0	1/1:30,13:38:16.98:177,17,0	1/1:10,23:33:57.14:688,57,0	0/1:15,7:22:19.03:19,0,21	0/0:44,2:45:13.92:0,14,745	1/1:7,26:34:62.99:740,63,0	0/0:49,0:50:99:0,113,1810	1/1:5,26:31:72.22:888,72,0	0/1:23,2:24:99:108,0,185	0/1:12,10:22:8.33:167,0,8	0/1:49,15:62:42.54:211,0,43	1/1:5,20:25:18.05:223,18,0	1/1:3,3:6:6.01:74,6,0	1/1:30,11:46:2.86:37,3,0	1/1:2,22:24:57.18:706,57,0	0/1:17,12:28:99:398,0,141	0/1:10,1:12:5.01:31,0,5	./.
chr10	90960513	.	GCA	G	6654.68	PASS	AB=0.772;AC=15;AF=0.268;AN=56;BaseQRankSum=0.083;DP=1332;FS=4.068;HRun=0;HaplotypeScore=444.6127;InbreedingCoeff=-0.3660;MQ=41.10;MQ0=23;MQRankSum=-3.324;QD=7.88;ReadPosRankSum=1.732;VQSLOD=3.5381;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,105,1725	0/0:13,0:13:33.11:0,33,529	0/0:46,0:14:26.98:0,27,411	0/0:40,0:22:42.04:0,42,627	0/1:25,7:32:99:161,0,489	0/1:22,10:27:99:106,0,557	0/1:45,19:60:99:509,0,1428	0/1:53,15:55:99:505,0,1073	0/1:43,22:59:99:591,0,968	0/0:62,0:62:99:0,166,2740	0/0:20,0:20:33.11:0,33,532	0/1:40,23:60:99:587,0,1267	0/0:38,1:39:42.69:0,43,1242	0/1:34,14:43:99:331,0,902	0/0:47,1:48:81.94:0,82,1923	0/0:43,0:42:99:0,102,1715	0/0:44,0:44:99:0,111,1867	0/0:26,0:23:60.21:0,60,1006	0/1:33,9:25:99:213,0,550	0/1:42,14:55:99:395,0,984	0/1:84,57:127:99:1711,0,1966	0/0:27,0:27:42.14:0,42,651	0/1:31,5:33:66.65:67,0,637	0/1:44,34:73:99:513,0,813	0/0:33,0:32:81.28:0,81,1331	0/1:60,20:75:99:525,0,2298	0/1:19,10:29:99:345,0,394	0/1:5,4:9:94.66:95,0,180
chr10	90960562	.	TACACAG	T	4046.30	PASS	AB=0.904;AC=15;AF=0.278;AN=54;BaseQRankSum=-2.264;DP=1114;FS=7.756;HRun=0;HaplotypeScore=334.5279;InbreedingCoeff=0.4249;MQ=34.12;MQ0=227;MQRankSum=-5.499;QD=9.45;ReadPosRankSum=0.956;VQSLOD=0.6242;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:31:36.10:0,36,969	0/0:15,0:13:8.96:0,9,144	0/0:30,0:2:2.98:0,3,21	./.	0/0:36,0:24:6.01:0,6,202	0/0:25,0:16:0:0,0,0	0/1:46,0:26:51.25:51,0,110	0/0:65,0:34:6.61:0,7,1095	0/0:44,0:35:2.10:0,2,407	1/1:34,16:43:87.26:1720,87,0	0/0:6,14:19:0:0,0,0	0/0:34,0:27:11.96:0,12,274	1/1:6,31:35:39.13:827,39,0	0/0:33,0:25:12.01:0,12,226	0/0:60,0:54:57.11:0,57,1509	1/1:6,33:33:23.90:501,24,0	0/0:39,0:30:42.14:0,42,1232	1/1:11,11:16:33.04:577,33,0	0/0:34,0:20:9.55:0,10,437	0/1:46,0:39:70.28:70,0,129	0/0:122,0:93:6.02:0,6,1123	0/1:2,26:27:0:0,0,0	0/0:24,0:19:8.99:0,9,148	0/1:58,0:46:25.43:25,0,473	1/1:15,7:21:12:210,12,0	0/1:79,0:52:64.04:64,0,950	0/0:14,0:12:5.47:0,5,148	0/0:14,0:9:13.85:0,14,275
chr10	90960578	.	CAGAT	C	1701.37	PASS	AB=0.966;AC=18;AF=0.360;AN=50;BaseQRankSum=4.117;DP=986;FS=29.460;HRun=0;HaplotypeScore=238.8809;InbreedingCoeff=-0.1321;MQ=30.69;MQ0=276;MQRankSum=-3.605;QD=2.88;ReadPosRankSum=2.578;VQSLOD=1.4149;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:29:33.11:0,33,699	0/0:12,0:10:3.01:0,3,84	./.	./.	0/0:32,1:21:6.01:0,6,157	0/0:20,0:11:0:0,0,0	0/1:32,2:15:36.92:84,0,37	0/1:60,1:27:32.03:32,0,1290	0/1:32,0:23:15.72:16,0,276	0/1:43,0:33:99:383,0,192	0/0:20,0:17:0:0,0,0	0/0:26,0:19:12.04:0,12,237	1/1:39,0:34:4.26:161,4,0	0/0:25,0:14:6.02:0,6,132	0/0:64,0:56:47.73:0,48,1099	1/1:46,0:35:21.39:135,21,0	0/0:38,0:28:45.12:0,45,1004	0/1:22,0:15:8.62:123,0,9	0/1:24,0:12:47.64:48,0,339	0/1:31,9:31:53.64:333,0,54	0/1:91,1:63:51.81:52,0,790	./.	0/1:23,2:17:37.76:38,0,78	0/1:45,1:34:73.22:73,0,327	1/1:16,0:10:9.03:128,9,0	0/1:56,1:26:99:237,0,684	0/1:12,0:9:10.02:10,0,99	0/0:13,0:8:11.54:0,12,225
chr10	90960594	.	CGA	C	42.32	PASS	AB=0.706;AC=5;AF=0.109;AN=46;BaseQRankSum=3.365;DP=822;FS=1.910;HRun=0;HaplotypeScore=145.8805;InbreedingCoeff=0.3284;MQ=24.40;MQ0=305;MQRankSum=-0.856;QD=0.55;ReadPosRankSum=0.544;VQSLOD=2.8723;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:26:15.05:0,15,305	0/0:15,0:13:3.01:0,3,61	./.	./.	./.	0/0:9,0:4:0:0,0,0	1/1:14,2:10:3.01:43,3,0	0/0:37,1:28:26.60:0,27,1053	0/0:12,0:8:3.01:0,3,38	0/0:46,0:29:87.29:0,87,1495	0/0:19,0:15:0:0,0,0	0/0:15,0:9:8.52:0,9,131	0/0:41,0:31:36.01:0,36,507	1/1:11,0:3:3:26,3,0	0/0:58,0:50:23.83:0,24,471	0/0:53,0:33:18.05:0,18,256	0/0:36,0:24:33.11:0,33,595	0/0:24,0:15:27.09:0,27,447	0/0:12,1:6:15.05:0,15,268	0/0:14,10:21:2.31:0,2,18	0/0:46,2:30:11.61:0,12,195	./.	0/0:15,5:13:3.01:0,3,61	0/0:24,1:18:9.03:0,9,182	./.	0/1:21,2:10:71.96:72,0,153	0/0:4,0:3:2.99:0,3,61	0/0:7,0:3:2.97:0,3,37
chr10	90960605	.	GATAT	G	87.10	PASS	AB=0.992;AC=14;AF=0.292;AN=48;BaseQRankSum=4.862;DP=831;FS=0.000;HRun=0;HaplotypeScore=140.9470;InbreedingCoeff=0.4303;MQ=22.01;MQ0=317;MQRankSum=0.657;QD=0.35;ReadPosRankSum=-1.711;VQSLOD=2.4385;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:25:5.59:0,6,91	0/0:16,0:14:3.01:0,3,65	./.	./.	0/1:22,0:13:0.01:0,0,0	0/0:11,0:4:0:0,0,0	1/1:31,2:14:5.74:31,6,0	0/0:45,0:27:72.18:0,72,1782	0/0:16,0:9:2.94:0,3,84	0/0:47,0:28:81.28:0,81,2149	0/0:19,0:14:0:0,0,0	1/1:11,0:4:2.95:27,3,0	0/0:43,0:30:21.06:0,21,583	1/1:16,0:4:2.76:15,3,0	0/0:59,0:47:8.54:0,9,155	0/0:54,0:29:12.03:0,12,305	0/0:30,0:17:15.05:0,15,363	0/0:23,0:12:24.08:0,24,668	0/0:18,0:8:15.05:0,15,405	0/1:26,0:19:0.03:0,0,0	1/1:61,0:33:1.82:5,2,0	./.	0/0:17,0:11:2.99:0,3,25	0/1:29,0:16:0:1,0,0	./.	0/1:37,2:15:99:118,0,505	0/1:6,0:3:0:0,0,0	0/1:7,0:2:0:0,0,0
chr10	90960624	.	G	GCA	252.64	PASS	AB=0.856;AC=11;AF=0.250;AN=44;BaseQRankSum=3.686;DP=901;FS=28.051;HRun=0;HaplotypeScore=136.2766;InbreedingCoeff=0.2945;MQ=21.71;MQ0=329;MQRankSum=0.056;QD=1.18;ReadPosRankSum=-1.924;VQSLOD=0.4942;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:29:2.99:0,3,23	./.	./.	./.	0/1:15,2:11:0.05:0,0,0	0/1:7,1:1:0:0,0,0	0/0:21,8:15:0.61:0,1,17	0/0:43,3:30:6.98:0,7,401	0/0:14,1:9:5.03:0,5,61	0/0:62,0:35:93.26:0,93,1134	./.	0/0:9,1:4:3.76:0,4,17	0/0:52,0:30:5.98:0,6,57	0/1:18,1:6:1.81:46,0,2	0/0:60,0:46:2.88:0,3,25	0/0:60,0:33:9.03:0,9,112	0/0:28,1:20:8.35:0,8,111	0/0:22,0:10:9.03:0,9,113	0/0:24,0:10:16.60:0,17,192	0/1:16,5:13:0.01:0,0,0	0/1:70,1:36:0:0,0,1	0/0:44,0:38:6:0,6,61	./.	1/1:26,6:20:3.13:12,3,0	./.	0/1:27,6:20:99:266,0,139	0/1:3,5:4:0.02:0,0,0	1/1:4,0:1:3:28,3,0
chr10	90960636	.	ACTG	A	37.39	PASS	AB=0.956;AC=13;AF=0.250;AN=52;BaseQRankSum=4.625;DP=923;FS=0.000;HRun=0;HaplotypeScore=141.8378;InbreedingCoeff=0.3569;MQ=24.16;MQ0=314;MQRankSum=-2.424;QD=0.19;ReadPosRankSum=-0.299;VQSLOD=2.1646;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:35:17.36:0,17,380	0/0:25,0:24:27.09:0,27,592	./.	./.	0/0:18,1:13:1.19:0,1,5	0/0:5,0:2:2.92:0,3,18	1/1:20,0:12:4.15:54,4,0	0/0:49,1:30:75.17:0,75,1523	0/0:13,2:12:3.87:0,4,112	0/0:64,0:38:99:0,111,2576	0/0:23,0:18:3.01:0,3,67	0/1:8,1:6:28.91:29,0,42	0/0:54,0:30:20.76:0,21,420	0/1:18,2:8:4.55:21,0,5	0/0:59,0:45:2.86:0,3,71	0/0:58,0:32:17.64:0,18,359	0/0:30,0:23:13.54:0,14,341	0/1:23,0:11:0.26:0,0,366	0/0:24,0:8:21.07:0,21,457	0/0:18,0:11:0:0,0,0	1/1:70,0:34:1.55:6,2,0	0/0:50,0:43:27.09:0,27,614	0/1:11,0:6:0:0,0,0	0/1:31,1:21:0.46:2,0,0	0/0:28,0:14:6.02:0,6,135	0/0:37,3:21:36.07:0,36,930	1/1:8,0:4:0.47:1,0,0	1/1:4,0:1:3.01:37,3,0
chr10	90960646	.	GAC	G	691.89	PASS	AB=0.832;AC=17;AF=0.340;AN=50;BaseQRankSum=7.483;DP=916;FS=26.441;HRun=0;HaplotypeScore=137.9961;InbreedingCoeff=0.2398;MQ=26.63;MQ0=289;MQRankSum=-4.626;QD=2.28;ReadPosRankSum=2.009;VQSLOD=0.8566;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:39:26.74:0,27,440	0/0:24,1:24:30.10:0,30,510	./.	./.	0/1:14,3:11:0:0,0,0	0/0:4,0:2:2.65:0,3,11	0/0:17,5:13:2.47:0,2,9	0/1:30,24:28:33.95:379,0,34	0/1:13,3:13:1.87:11,0,2	0/0:76,0:49:99:0,135,2206	0/0:21,0:16:3.01:0,3,51	0/1:4,3:6:1.15:33,0,1	0/0:56,0:32:27.09:0,27,457	1/1:17,3:8:5.56:39,6,0	0/0:55,2:45:21.06:0,21,353	0/0:64,0:39:36.11:0,36,612	0/0:33,0:27:36.07:0,36,563	0/1:22,1:11:12.05:12,0,213	0/1:19,4:9:24.91:25,0,81	1/1:15,0:10:0.36:1,0,0	1/1:40,17:30:1.87:6,2,0	0/0:50,0:43:39.13:0,39,659	./.	0/1:21,6:19:0.03:1,0,0	0/0:32,0:16:9.03:0,9,153	0/1:25,10:21:99:305,0,182	0/1:7,0:4:0:0,0,0	1/1:3,0:1:1.82:5,2,0
chr10	90960660	.	C	CT	49.33	PASS	AB=0.847;AC=11;AF=0.212;AN=52;BaseQRankSum=4.438;DP=863;FS=1.274;HRun=0;HaplotypeScore=159.1187;InbreedingCoeff=0.2669;MQ=29.14;MQ0=246;MQRankSum=-3.374;QD=0.49;ReadPosRankSum=0.196;VQSLOD=2.8389;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:45:35.90:0,36,503	0/0:23,0:23:36.11:0,36,486	./.	./.	0/0:9,1:7:0.61:0,1,2	1/1:4,0:3:1.91:6,2,0	0/0:17,1:10:5.91:0,6,56	0/0:51,0:22:23.04:0,23,553	0/1:16,5:18:12.85:60,0,13	0/0:82,0:55:99:0,160,2193	0/0:20,0:16:6.02:0,6,82	1/1:7,1:8:3.74:47,4,0	0/0:58,0:35:42.14:0,42,581	0/0:12,5:10:7.12:0,7,28	0/0:53,0:43:33.09:0,33,444	0/0:59,0:36:44.44:0,44,605	0/0:31,0:26:45.11:0,45,607	0/1:27,0:18:11.25:11,0,410	0/1:12,2:6:32.84:33,0,112	0/1:7,4:7:0:0,0,0	0/0:41,4:26:0.95:0,1,3	0/0:46,0:40:42.14:0,42,587	0/1:7,2:7:0.08:1,0,0	0/0:26,1:24:2.04:0,2,11	0/0:33,0:17:21.07:0,21,294	0/0:25,2:15:1:0,1,485	1/1:5,1:4:0.36:1,0,0	0/0:2,0:1:2.97:0,3,20
chr10	90960667	.	AAG	A	98.52	PASS	AB=0.917;AC=18;AF=0.360;AN=50;BaseQRankSum=7.640;DP=843;FS=1.736;HRun=0;HaplotypeScore=175.8085;InbreedingCoeff=0.4528;MQ=31.33;MQ0=217;MQRankSum=-6.282;QD=0.54;ReadPosRankSum=-1.599;VQSLOD=2.3179;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,1:50:80.91:0,81,1344	0/0:24,0:24:39.13:0,39,777	./.	./.	0/0:6,0:5:1.55:0,2,4	0/1:3,0:3:2.10:7,0,2	1/1:14,2:10:5.75:48,6,0	0/0:46,1:20:29.32:0,29,183	1/1:14,4:17:13.18:63,13,0	0/0:84,0:59:99:0,172,3307	0/0:21,0:18:15.05:0,15,256	0/1:8,1:9:16.64:17,0,21	0/0:61,0:40:66.22:0,66,1133	0/1:13,2:10:0.12:8,0,0	0/0:49,0:40:87.28:0,87,1384	0/0:59,0:38:72.23:0,72,1257	0/0:36,0:31:72.04:0,72,1250	0/0:28,0:19:34.07:0,34,724	0/1:10,1:5:7.03:7,0,15	1/1:9,0:7:0.36:1,0,0	1/1:30,2:23:0.29:8,0,0	0/0:46,0:41:48.16:0,48,954	0/1:5,1:7:0:0,0,0	1/1:22,4:24:7.60:44,8,0	0/0:33,0:20:36.12:0,36,656	0/1:23,2:17:35.13:35,0,210	1/1:6,0:5:0.88:3,1,0	./.
chr10	90960669	.	G	GCA	504.45	PASS	AB=0.830;AC=19;AF=0.380;AN=50;BaseQRankSum=5.500;DP=844;FS=4.368;HRun=0;HaplotypeScore=184.1217;InbreedingCoeff=0.4673;MQ=31.80;MQ0=212;MQRankSum=-5.648;QD=2.70;ReadPosRankSum=-1.456;VQSLOD=2.2087;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:50:81.26:0,81,1005	0/0:24,0:24:39.12:0,39,492	./.	./.	0/0:6,1:6:0:0,0,0	1/1:2,1:4:3.01:48,3,0	1/1:12,4:11:2.88:48,3,0	0/0:37,11:20:21.08:0,21,138	1/1:15,2:17:9.09:112,9,0	0/0:83,0:59:99:0,159,1989	0/0:19,0:16:15.05:0,15,189	0/1:7,0:8:2.82:3,0,6	0/0:59,0:39:66.21:0,66,815	1/1:12,2:10:0.48:50,0,0	0/0:50,0:41:87:0,87,1003	0/0:57,0:39:72.07:0,72,829	0/0:37,0:33:75.07:0,75,915	0/0:29,0:20:41.88:0,42,499	0/1:8,3:5:7.66:44,0,8	0/1:6,1:7:0.08:0,0,0	1/1:30,5:25:0.04:45,0,0	0/0:48,0:43:51.15:0,51,630	0/1:2,3:7:0.01:0,0,0	1/1:16,5:23:1.12:92,1,0	0/0:32,0:20:36.11:0,36,453	0/1:18,7:18:16.64:195,0,17	1/1:3,3:5:1.25:4,1,0	./.
chr10	90960676	.	C	CAG	367.50	PASS	AB=0.976;AC=19;AF=0.380;AN=50;BaseQRankSum=7.226;DP=850;FS=0.765;HRun=0;HaplotypeScore=190.7007;InbreedingCoeff=0.5134;MQ=33.02;MQ0=201;MQRankSum=-6.666;QD=1.91;ReadPosRankSum=-3.311;VQSLOD=1.9329;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:54:90.22:0,90,1296	0/0:23,0:23:39.13:0,39,596	./.	./.	0/0:7,0:7:0:0,0,1	1/1:4,0:4:3:30,3,0	1/1:16,0:11:2.17:29,2,0	0/0:46,0:17:32.63:0,33,309	1/1:20,1:19:7.65:88,8,0	0/0:83,0:60:99:0,174,2539	0/0:21,0:19:18.04:0,18,253	1/1:7,1:8:3.02:24,3,0	0/0:61,0:41:72.21:0,72,1051	1/1:14,1:11:6.76:44,7,0	0/0:51,0:42:96.27:0,96,1361	0/0:55,0:38:78.18:0,78,1107	0/0:40,0:35:84.17:0,84,1185	0/0:30,0:22:41.87:0,42,703	0/1:10,1:5:13.28:40,0,13	0/1:11,0:9:0.19:0,0,0	0/1:39,0:26:0.27:28,0,0	0/0:45,0:41:60.11:0,60,842	0/1:9,0:9:0.01:0,0,0	1/1:25,0:22:1.12:58,1,0	0/0:32,0:20:36.12:0,36,550	0/1:27,1:20:99:157,0,115	1/1:5,0:4:2.92:18,3,0	./.
chr10	90960679	.	ACAT	A	793.50	PASS	AB=0.812;AC=13;AF=0.241;AN=54;BaseQRankSum=8.467;DP=819;FS=22.129;HRun=0;HaplotypeScore=180.7922;InbreedingCoeff=0.2617;MQ=34.12;MQ0=185;MQRankSum=-7.299;QD=6.15;ReadPosRankSum=-1.504;VQSLOD=1.0322;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:62,1:53:99:0,102,2219	0/0:24,0:24:42.14:0,42,1006	0/0:41,0:1:3.01:0,3,43	0/0:54,0:3:6.01:0,6,69	0/1:4,2:6:0.36:0,0,0	1/1:3,1:4:0.47:1,0,0	0/0:10,3:8:1.42:0,1,7	1/1:27,14:14:26.57:437,27,0	0/0:15,4:18:0.98:0,1,44	0/0:79,0:60:99:0,178,4199	0/0:20,0:18:21.07:0,21,483	0/1:4,4:8:11.43:51,0,11	0/0:60,0:42:84.17:0,84,1864	0/1:11,4:11:8.83:69,0,9	0/0:55,0:46:99:0,114,2401	0/0:57,0:40:96.21:0,96,1981	0/0:41,0:37:95.29:0,95,2072	0/0:31,0:23:0.78:0,1,1241	0/1:9,1:6:45.74:46,0,65	0/1:5,2:6:0.02:1,0,0	0/0:23,11:24:4.59:0,5,24	0/0:44,0:40:60.21:0,60,1420	0/1:8,1:9:0:0,0,0	0/0:15,9:22:5.51:0,6,34	0/0:31,0:20:36.12:0,36,886	0/1:21,3:16:99:300,0,162	1/1:5,0:4:2.92:17,3,0	./.
chr10	90960681	.	ATTG	A	758.71	PASS	AB=0.824;AC=22;AF=0.407;AN=54;BaseQRankSum=9.643;DP=792;FS=10.786;HRun=0;HaplotypeScore=177.1310;InbreedingCoeff=0.4131;MQ=34.91;MQ0=180;MQRankSum=-8.501;QD=3.36;ReadPosRankSum=-2.842;VQSLOD=1.2412;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:62,1:53:99:0,108,2496	0/0:22,0:22:42.14:0,42,1035	0/0:39,0:1:3.01:0,3,74	0/0:54,0:4:8.82:0,9,121	0/1:3,2:6:0.36:1,0,0	1/1:2,1:4:3:28,3,0	1/1:10,2:8:6.01:55,6,0	0/1:40,1:14:31.46:130,0,31	1/1:9,5:16:13.24:87,13,0	0/0:79,0:62:99:0,181,4330	0/0:20,0:18:21.07:0,21,517	1/1:5,2:8:8.39:85,8,0	0/0:61,0:43:90.23:0,90,2129	1/1:7,2:8:5.68:55,6,0	0/0:60,0:51:99:0,132,2876	0/0:56,0:39:96.17:0,96,2085	0/0:41,0:37:99:0,102,2415	0/1:29,1:24:18.04:18,0,1395	0/1:7,1:4:13.79:14,0,34	0/1:3,1:4:0.01:1,0,0	0/1:26,0:21:2.86:8,0,3	0/0:41,0:37:60.21:0,60,1479	0/1:6,1:8:0:1,0,0	1/1:18,2:18:4.66:24,5,0	0/0:30,0:20:36.12:0,36,886	0/1:13,5:15:99:380,0,141	1/1:4,1:4:3.01:37,3,0	./.
chr10	90960684	.	G	GA	148.16	PASS	AB=0.926;AC=10;AF=0.185;AN=54;BaseQRankSum=6.584;DP=806;FS=0.000;HRun=0;HaplotypeScore=187.7450;InbreedingCoeff=0.4348;MQ=35.45;MQ0=168;MQRankSum=-5.438;QD=1.50;ReadPosRankSum=-3.279;VQSLOD=1.7612;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:55:99:0,105,1438	0/0:21,0:21:42.14:0,42,587	0/0:36,0:1:3.01:0,3,42	0/0:56,0:6:14.78:0,15,165	0/1:8,1:9:0.36:0,0,0	0/0:4,0:4:0:0,0,0	0/0:12,0:8:0:0,0,0	0/0:39,0:14:17.44:0,17,195	0/1:16,1:16:0.55:1,0,3	0/0:77,0:62:99:0,172,2376	0/0:20,0:18:21.07:0,21,294	0/1:13,0:13:1.51:4,0,2	0/0:59,0:42:90.30:0,90,1240	1/1:13,0:11:1.16:8,1,0	0/0:61,0:52:99:0,117,1611	0/0:55,0:41:90.30:0,90,1233	0/0:43,0:39:99:0,102,1387	0/0:31,0:26:50.57:0,51,825	0/0:8,0:4:5.75:0,6,53	0/1:7,1:7:0.44:0,0,0	0/0:29,1:21:3.61:0,4,14	0/0:41,0:37:63.20:0,63,865	0/1:8,1:9:0.08:0,0,0	0/0:20,0:18:1.97:0,2,11	0/0:30,0:20:36.12:0,36,503	0/1:22,2:18:99:166,0,154	1/1:6,0:5:6.02:70,6,0	./.
chr10	90960687	.	CATAG	C	238.78	PASS	AB=0.824;AC=20;AF=0.370;AN=54;BaseQRankSum=8.307;DP=801;FS=26.687;HRun=0;HaplotypeScore=206.0880;InbreedingCoeff=0.5056;MQ=35.91;MQ0=160;MQRankSum=-6.594;QD=1.19;ReadPosRankSum=-4.059;VQSLOD=0.2954;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:57:99:0,111,3011	0/0:22,0:22:45.15:0,45,1244	0/0:33,0:1:3.01:0,3,84	0/0:57,0:8:12.86:0,13,424	0/1:8,2:10:0.02:0,0,0	0/1:2,2:4:0.06:0,0,0	0/1:8,2:7:0:0,0,0	1/1:31,0:11:11.89:72,12,0	0/1:14,3:16:2.73:3,0,6	0/0:75,0:61:99:0,178,4768	0/0:19,0:18:21.07:0,21,587	1/1:10,2:12:0.04:56,0,0	0/0:61,0:44:96.33:0,96,2654	1/1:11,3:12:3.27:32,3,0	0/0:61,0:52:99:0,117,3268	0/0:54,0:40:90.31:0,90,2511	0/0:41,0:38:99:0,99,2706	0/0:30,1:26:11.67:0,12,1621	1/1:7,1:4:3.01:45,3,0	1/1:8,2:9:0.33:2,0,0	1/1:18,6:19:0.14:1,0,0	0/0:42,0:38:63.22:0,63,1762	0/1:8,1:9:0:0,0,0	1/1:15,5:18:3.59:14,4,0	0/0:31,0:21:39.13:0,39,1080	0/1:21,4:18:99:145,0,315	0/0:6,0:5:5.85:0,6,62	./.
chr10	90960688	.	ATAGACACACATACACTGCACATAGC	A	1912.68	PASS	AB=1.000;AC=21;AF=0.389;AN=54;BaseQRankSum=8.073;DP=783;FS=12.185;HRun=0;HaplotypeScore=350.8738;InbreedingCoeff=0.4347;MQ=36.51;MQ0=153;MQRankSum=-6.874;QD=9.24;ReadPosRankSum=-2.789;VQSLOD=0.6317;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:57:99:0,102,10043	0/0:22,0:22:45.15:0,45,4192	0/0:36,0:3:6.02:0,6,403	0/0:55,0:9:27.09:0,27,1742	0/1:10,0:10:0:1,0,0	1/1:4,0:4:1.17:3,1,0	0/0:9,0:6:2.61:0,3,26	0/1:25,0:7:6.07:110,0,6	1/1:16,1:16:1.09:27,1,0	0/0:74,0:60:99:0,181,14483	0/0:19,0:18:21.07:0,21,2065	1/1:10,2:12:4.21:379,4,0	0/0:60,0:44:96.33:0,96,8857	1/1:12,2:12:3.01:155,3,0	0/0:61,0:52:99:0,129,11217	0/0:54,0:40:93.28:0,93,8196	0/0:42,0:39:99:0,105,8991	0/1:31,0:26:99:359,0,5820	1/1:8,0:4:3.01:188,3,0	1/1:10,0:9:3.01:49,3,0	1/1:25,0:16:2.88:20,3,0	0/0:43,0:39:69.24:0,69,6273	0/1:9,0:9:0:1,0,0	1/1:16,1:15:5.83:33,6,0	0/0:30,0:20:39.13:0,39,3925	0/1:25,0:18:99:738,0,337	0/0:6,0:5:3.29:0,3,51	./.
chr10	90960689	.	TAG	T	83.36	PASS	AB=0.945;AC=19;AF=0.352;AN=54;BaseQRankSum=7.587;DP=777;FS=11.507;HRun=0;HaplotypeScore=190.8161;InbreedingCoeff=0.4932;MQ=36.61;MQ0=150;MQRankSum=-6.494;QD=0.49;ReadPosRankSum=-2.459;VQSLOD=1.5572;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:57:99:0,111,2097	0/0:22,0:22:45.15:0,45,858	0/0:37,0:3:6.02:0,6,101	0/0:54,0:9:22.89:0,23,342	0/1:9,0:10:0:0,0,0	0/1:4,0:4:0.01:0,0,0	0/1:8,0:6:0:0,0,0	1/1:24,0:7:6.88:57,7,0	0/0:16,2:17:1.35:0,1,10	0/0:73,0:59:99:0,172,3271	0/0:18,0:17:21.07:0,21,405	1/1:12,0:12:4.54:30,5,0	0/0:59,0:43:96.33:0,96,1827	1/1:13,1:12:2.45:11,2,0	0/0:60,0:52:99:0,117,2253	0/0:53,0:40:90.31:0,90,1731	0/0:42,0:39:99:0,99,1856	0/0:31,0:26:40.93:0,41,1130	1/1:7,0:3:2.90:16,3,0	0/1:9,0:9:0.11:0,0,0	1/1:25,0:16:2.90:17,3,0	0/0:43,0:39:69.22:0,69,1289	0/1:8,1:9:0:0,0,0	1/1:16,1:15:1.76:5,2,0	0/0:30,0:20:39.13:0,39,752	0/1:24,0:18:70.99:71,0,120	0/1:6,0:5:10.70:11,0,16	./.
chr10	90960697	.	CAT	C	206.69	PASS	AB=0.942;AC=20;AF=0.385;AN=52;BaseQRankSum=8.689;DP=790;FS=7.782;HRun=0;HaplotypeScore=222.8746;InbreedingCoeff=0.4781;MQ=39.97;MQ0=117;MQRankSum=-7.888;QD=0.89;ReadPosRankSum=-3.558;VQSLOD=1.1012;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:56:99:0,117,2182	0/0:19,0:19:45.15:0,45,867	0/1:36,0:9:2.77:3,0,212	0/0:49,0:16:44.72:0,45,649	0/1:10,2:12:0.02:0,0,0	0/1:5,1:5:0:0,0,0	0/1:12,1:8:0.01:0,0,0	./.	1/1:22,0:21:2:5,2,0	0/0:75,0:65:99:0,196,3341	0/0:18,0:17:27.08:0,27,478	1/1:22,0:22:14.19:81,14,0	0/0:56,0:44:99:0,105,1937	1/1:15,1:14:2.86:21,3,0	0/0:63,0:58:99:0,126,2390	0/0:52,0:44:93.32:0,93,1770	0/0:45,0:43:99:0,108,1926	0/0:32,2:29:8.44:0,8,1225	1/1:6,1:4:5.97:51,6,0	0/1:12,0:11:0.21:0,0,0	1/1:19,3:15:0.45:2,0,0	0/0:36,0:32:72.25:0,72,1380	0/1:12,0:12:0.11:0,0,0	1/1:15,2:15:1.78:5,2,0	0/0:30,0:21:45.13:0,45,798	0/1:22,3:19:14.83:151,0,15	0/1:9,0:8:14.15:20,0,14	./.
chr10	90960698	.	ATACAC	A	282.50	PASS	AB=0.973;AC=19;AF=0.365;AN=52;BaseQRankSum=7.876;DP=776;FS=20.286;HRun=0;HaplotypeScore=237.5785;InbreedingCoeff=0.4742;MQ=41.47;MQ0=114;MQRankSum=-5.733;QD=1.46;ReadPosRankSum=-2.927;VQSLOD=0.9795;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:57:99:0,116,3730	0/0:19,0:19:45.15:0,45,1454	0/0:37,0:10:24.01:0,24,602	0/0:54,0:18:45.48:0,45,1309	0/1:12,0:12:0.09:1,0,0	0/0:5,1:5:0:0,0,0	0/0:12,1:8:1.91:0,2,9	./.	1/1:17,3:19:6.62:37,7,0	0/0:75,0:65:99:0,193,5772	0/0:19,0:18:30.10:0,30,913	1/1:21,1:21:11.93:168,12,0	0/0:55,0:44:99:0,111,3417	1/1:13,2:13:2.81:22,3,0	0/0:63,0:58:99:0,126,4048	0/0:52,0:44:96.33:0,96,3033	0/0:45,0:43:99:0,111,3267	0/1:33,0:29:15.01:15,0,2224	1/1:6,0:3:6.01:68,6,0	1/1:10,2:11:0.90:3,1,0	1/1:16,1:12:0.38:2,0,0	0/0:37,0:33:75.26:0,75,2389	0/1:9,1:10:0.09:0,0,0	1/1:12,4:14:2.37:8,2,0	0/0:30,0:21:45.15:0,45,1423	0/1:20,1:15:93.09:93,0,514	0/1:9,0:8:10.19:10,0,147	./.
chr10	90960708	.	CAT	C	61.95	PASS	AB=0.924;AC=14;AF=0.259;AN=54;BaseQRankSum=7.285;DP=781;FS=25.511;HRun=0;HaplotypeScore=248.7355;InbreedingCoeff=0.4632;MQ=44.74;MQ0=73;MQRankSum=-6.358;QD=0.38;ReadPosRankSum=-1.585;VQSLOD=0.6643;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:63:99:0,129,2448	0/0:16,0:16:45.15:0,45,868	0/0:29,0:13:33.11:0,33,583	0/0:55,0:29:73.57:0,74,1303	0/1:10,2:12:0.02:0,0,0	0/0:10,0:8:2.60:0,3,17	0/0:11,1:8:2.59:0,3,10	./.	1/1:19,0:19:2.33:6,2,0	0/0:71,0:67:99:0,199,3744	0/0:18,0:18:36.11:0,36,662	1/1:26,0:24:13.62:70,14,0	0/0:54,0:45:99:0,114,2158	0/1:18,1:17:17.66:18,0,40	0/0:64,0:61:99:0,138,2604	0/0:53,0:49:99:0,108,2004	0/0:47,0:46:99:0,117,2189	0/0:37,1:35:53.04:0,53,1525	1/1:5,1:3:5.85:43,6,0	0/1:12,0:12:0.21:0,0,0	0/1:14,3:11:0.25:1,0,0	0/0:36,0:35:93.28:0,93,1727	0/1:12,0:12:0.11:0,0,0	1/1:17,1:15:1.82:5,2,0	0/0:26,0:19:51.16:0,51,951	0/1:20,3:18:45.67:46,0,293	0/0:9,0:9:0.88:0,1,108	0/0:3,0:3:7.24:0,7,52
chr10	90960709	.	ATAGC	A	827.05	PASS	AB=0.876;AC=20;AF=0.370;AN=54;BaseQRankSum=8.354;DP=784;FS=19.629;HRun=0;HaplotypeScore=262.9978;InbreedingCoeff=0.3811;MQ=44.97;MQ0=68;MQRankSum=-7.497;QD=3.60;ReadPosRankSum=-2.557;VQSLOD=0.8599;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:62,1:61:99:0,123,3699	0/0:16,0:16:45.15:0,45,1303	0/0:29,0:15:33.11:0,33,908	0/0:51,1:29:81.15:0,81,1959	0/1:11,1:12:0.14:0,0,0	0/1:6,3:8:1:7,0,1	0/0:7,5:8:2.15:0,2,9	./.	1/1:16,5:21:11.72:60,12,0	0/0:72,0:68:99:0,202,5509	0/0:18,0:18:36.12:0,36,1039	1/1:18,8:24:16.86:322,17,0	0/0:54,0:45:99:0,120,3316	0/1:13,6:17:25.84:49,0,26	0/0:65,0:62:99:0,168,4121	0/0:53,0:49:99:0,123,3190	0/0:47,0:46:99:0,123,3348	0/1:37,2:36:83.23:83,0,2344	1/1:4,2:3:6.02:121,6,0	1/1:9,3:12:2.74:34,3,0	1/1:15,3:12:2.20:17,2,0	0/0:36,0:35:93.32:0,93,2674	0/1:10,1:11:0.06:0,0,0	1/1:13,5:15:5.71:33,6,0	0/0:27,0:20:54.19:0,54,1514	0/1:22,2:19:99:187,0,152	0/1:7,2:9:59.64:61,0,60	0/1:5,0:5:16.44:16,0,19
chr10	90960713	.	C	CA	332.24	PASS	AB=0.937;AC=16;AF=0.286;AN=56;BaseQRankSum=5.305;DP=839;FS=7.007;HRun=0;HaplotypeScore=261.6634;InbreedingCoeff=0.3067;MQ=44.53;MQ0=56;MQRankSum=-5.391;QD=1.55;ReadPosRankSum=-3.145;VQSLOD=1.2577;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:63:99:0,145,1871	0/0:17,0:17:45.15:0,45,629	0/0:28,0:18:42.05:0,42,517	0/0:53,1:33:70.62:0,71,1028	0/1:13,0:12:0.22:0,0,1	0/1:13,1:12:6.88:41,0,7	0/0:12,0:9:2.31:0,2,10	1/1:17,1:4:3.01:48,3,0	1/1:21,2:22:1.35:89,1,0	0/0:71,0:68:99:0,195,2677	0/0:19,0:19:36.12:0,36,500	1/1:27,1:25:1.39:10,1,0	0/0:52,0:45:99:0,120,1649	0/1:25,1:24:17.09:17,0,34	0/0:68,0:66:99:0,165,2105	0/0:52,0:48:99:0,126,1646	0/0:46,0:45:99:0,123,1672	0/0:43,0:41:35.62:0,36,1244	0/1:11,0:6:0.88:35,0,1	1/1:15,0:14:1.57:26,2,0	0/1:21,1:12:1.71:43,0,2	0/0:35,0:34:93.31:0,93,1293	0/1:14,0:14:0.27:0,0,1	0/0:24,0:20:3.23:0,3,13	0/0:28,0:22:57.19:0,57,794	0/1:24,2:20:36.33:36,0,234	0/0:10,0:10:12.44:0,12,100	0/1:3,2:5:23.18:128,0,23
chr10	90960721	.	AAT	A	297.40	PASS	AB=0.756;AC=6;AF=0.107;AN=56;BaseQRankSum=7.258;DP=881;FS=20.105;HRun=0;HaplotypeScore=275.8009;InbreedingCoeff=-0.0246;MQ=46.36;MQ0=17;MQRankSum=-6.890;QD=2.73;ReadPosRankSum=1.813;VQSLOD=1.1385;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,146,2798	0/0:17,0:17:51.14:0,51,979	0/0:38,0:21:39.17:0,39,896	0/0:55,0:35:63.70:0,64,1413	0/1:9,9:14:0.01:0,0,0	0/0:13,4:14:0.25:0,0,157	0/1:13,3:11:5.05:5,0,57	0/0:28,0:15:39.13:0,39,670	0/0:11,10:20:23.60:0,24,170	0/0:70,0:69:99:0,199,3898	0/0:17,0:17:44.64:0,45,835	0/0:19,14:28:15.53:0,16,286	0/0:43,0:43:99:0,117,2281	0/0:22,9:26:7.54:0,8,317	0/0:63,0:63:99:0,171,3094	0/0:49,0:46:99:0,123,2268	0/0:47,0:46:99:0,115,2454	0/0:40,2:41:56.67:0,57,2064	0/0:18,0:10:27.06:0,27,414	0/0:14,9:17:14.66:0,15,138	0/1:15,2:12:7.42:7,0,41	0/0:35,0:35:93.23:0,93,1732	0/0:10,9:16:8.95:0,9,86	0/0:16,6:18:4.09:0,4,48	0/0:22,0:22:60.20:0,60,1180	0/1:22,13:25:99:272,0,308	0/1:6,6:11:63.81:89,0,64	0/1:6,2:8:31.94:32,0,263
chr10	90960754	.	CAT	C	1593.55	PASS	AB=0.855;AC=16;AF=0.286;AN=56;BaseQRankSum=8.380;DP=1222;FS=4.288;HRun=0;HaplotypeScore=297.0548;InbreedingCoeff=0.0805;MQ=33.93;MQ0=229;MQRankSum=-7.331;QD=2.70;ReadPosRankSum=-2.895;VQSLOD=1.5988;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:57:90.14:0,90,1572	0/0:8,0:8:15.05:0,15,275	0/0:60,0:6:14.88:0,15,149	0/1:56,0:8:19.30:19,0,32	1/1:32,13:31:5.91:84,6,0	0/0:26,7:22:6.01:0,6,109	1/1:28,8:17:5.17:49,5,0	0/1:53,17:27:99:406,0,475	0/1:41,8:32:71.52:72,0,132	0/0:62,0:53:99:0,144,2341	0/0:22,0:21:45.15:0,45,824	0/1:39,17:40:72.84:332,0,73	0/0:42,0:33:48.11:0,48,866	0/1:34,15:40:99:141,0,141	0/0:62,0:53:75.22:0,75,1276	0/0:60,0:45:54.15:0,54,927	0/0:43,0:41:58.34:0,58,1244	0/0:39,0:37:91.83:0,92,1455	0/1:31,3:10:61.72:62,0,135	1/1:28,14:30:11.83:168,12,0	0/0:30,3:9:3.01:0,3,55	0/0:35,0:33:57.19:0,57,1037	0/0:36,9:36:6.02:0,6,109	0/1:32,7:23:0.02:0,0,0	0/0:23,0:18:39.11:0,39,654	0/1:60,9:40:99:106,0,1421	0/1:24,5:23:99:216,0,182	0/1:14,3:10:99:100,0,275
chr10	90960807	.	C	CAGAG	1085.87	PASS	AB=0.936;AC=15;AF=0.288;AN=52;BaseQRankSum=7.678;DP=1131;FS=7.431;HRun=0;HaplotypeScore=242.5480;InbreedingCoeff=0.2120;MQ=24.82;MQ0=335;MQRankSum=-4.318;QD=2.78;ReadPosRankSum=-2.600;VQSLOD=0.8734;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:40:24.05:0,24,397	0/0:16,0:13:12:0,12,236	./.	./.	1/1:31,2:24:3:67,3,0	1/1:26,0:16:2.60:11,3,0	1/1:35,0:15:2.39:17,2,0	0/0:41,0:16:45.14:0,45,803	0/1:48,2:33:99:161,0,158	0/0:72,0:39:99:0,114,2255	0/0:32,0:25:12.04:0,12,226	0/1:46,5:36:57.53:218,0,58	0/0:53,0:35:8.72:0,9,179	0/1:45,3:38:44.97:217,0,45	0/0:52,0:40:11.78:0,12,185	0/0:69,0:42:20.65:0,21,347	0/0:27,0:21:17.37:0,17,224	0/0:29,0:19:36.05:0,36,617	0/0:19,0:8:21.03:0,21,369	1/1:29,2:18:9.02:160,9,0	0/0:48,0:20:7:0,7,28	0/0:47,0:40:12.04:0,12,240	0/1:33,0:27:28.38:28,0,51	0/1:36,1:22:0.01:1,0,0	0/0:35,0:18:6:0,6,69	0/0:53,0:33:70.19:0,70,1626	0/1:23,3:20:99:173,0,291	0/1:17,3:12:99:181,0,202
chr10	90960820	.	G	GCA	2498.85	PASS	AB=0.781;AC=24;AF=0.500;AN=48;BaseQRankSum=0.233;DP=1082;FS=69.310;HRun=0;HaplotypeScore=192.0167;InbreedingCoeff=0.5645;MQ=23.23;MQ0=344;MQRankSum=-1.533;QD=5.15;ReadPosRankSum=-0.129;VQSLOD=0.3244;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:53,0:37:0:0,0,0	0/0:15,0:12:6.02:0,6,75	./.	./.	0/1:14,13:20:0.04:0,0,0	1/1:12,5:9:2.26:8,2,0	1/1:21,10:14:5.97:68,6,0	1/1:20,19:19:8.43:657,8,0	1/1:29,23:36:12.26:196,12,0	0/0:75,0:36:75.22:0,75,918	0/0:31,0:23:3:0,3,26	1/1:24,25:34:8.57:109,9,0	0/0:56,0:37:15.01:0,15,175	1/1:20,22:33:5.46:97,5,0	0/0:52,0:38:2.76:0,3,37	0/0:64,0:40:5.53:0,6,62	0/0:29,0:23:11.67:0,12,107	0/0:25,0:14:18.06:0,18,225	1/1:12,7:6:18.06:297,18,0	0/0:13,10:14:1.96:0,2,6	0/1:37,13:26:5.30:23,0,5	./.	0/1:7,9:11:0.04:0,0,0	0/0:22,10:19:2.83:0,3,17	./.	1/1:33,18:32:15.61:820,16,0	1/1:13,8:16:18.06:287,18,0	1/1:11,3:8:1.16:92,1,0
chr10	90960865	.	G	GCA	12061.65	PASS	AC=30;AF=0.577;AN=52;BaseQRankSum=9.277;DP=1094;FS=51.884;HRun=0;HaplotypeScore=230.0660;InbreedingCoeff=0.9932;MQ=37.25;MQ0=194;MQRankSum=-3.008;QD=23.38;ReadPosRankSum=-2.145;VQSLOD=3.3389;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:37:59.99:0,60,735	0/0:20,0:19:33.10:0,33,404	./.	./.	1/1:10,16:23:41.63:671,42,0	1/1:0,13:13:30.10:496,30,0	1/1:11,29:26:15.05:249,15,0	1/1:18,14:19:36.86:624,37,0	1/1:16,32:47:66.70:1394,67,0	0/0:75,0:40:99:0,99,1221	0/0:31,0:27:33.08:0,33,390	1/1:19,22:39:13.25:742,13,0	0/0:52,0:44:60:0,60,699	1/1:7,31:36:59.79:979,60,0	0/0:61,0:56:95.71:0,96,1094	0/0:54,1:45:77.32:0,77,891	0/0:35,0:33:63.11:0,63,776	0/0:33,0:25:34.92:0,35,528	1/1:8,6:12:21.07:349,21,0	1/1:6,23:26:57.19:923,57,0	1/1:34,52:68:59.19:1591,59,0	0/0:48,0:42:57.14:0,57,717	1/1:5,18:23:36.04:529,36,0	1/1:17,29:43:72.01:1140,72,0	0/0:39,0:28:42.12:0,42,518	1/1:13,33:34:39.64:1179,40,0	1/1:6,10:15:33.11:547,33,0	1/1:0,14:14:39.13:647,39,0
chr10	90961152	.	TAC	T	19159.70	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=12.524;DP=956;FS=9.472;HRun=0;HaplotypeScore=259.8951;InbreedingCoeff=0.9995;MQ=55.80;MQ0=8;MQRankSum=0.197;QD=26.07;ReadPosRankSum=4.462;VQSLOD=4.3194;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:97.85:0,98,1576	0/0:13,0:13:36.12:0,36,599	0/0:55,1:34:64.75:0,65,1070	0/0:57,0:44:90.28:0,90,1458	1/1:4,19:23:26.67:312,27,0	1/1:0,19:19:48.08:587,48,0	1/1:3,20:23:48.07:586,48,0	1/1:11,23:34:69.18:855,69,0	1/1:10,56:66:99:1834,150,0	1/1:5,31:36:93.27:1179,93,0	1/1:1,18:19:33.11:429,33,0	1/1:11,36:47:99:1386,111,0	1/1:5,18:23:54.55:681,55,0	1/1:6,28:34:69.05:820,69,0	0/0:32,0:32:81.28:0,81,1377	1/1:4,30:34:78.25:1014,78,0	0/0:27,0:27:63.67:0,64,1030	1/1:4,17:20:46.19:665,46,0	1/1:7,13:19:42.11:528,42,0	1/1:8,23:29:44.97:509,45,0	1/1:19,69:88:99:1984,177,0	1/1:5,29:33:57.18:741,57,0	1/1:2,24:24:30.09:390,30,0	1/1:10,52:59:99:1697,135,0	1/1:2,29:31:72.23:936,72,0	1/1:6,28:34:81.26:1052,81,0	1/1:1,14:15:39.04:469,39,0	1/1:2,13:15:39.13:507,39,0
chr10	90961201	.	T	TAC	1318.63	PASS	AB=0.991;AC=42;AF=0.840;AN=50;BaseQRankSum=2.129;DP=661;FS=16.259;HRun=0;HaplotypeScore=264.2776;InbreedingCoeff=0.2376;MQ=42.77;MQ0=24;MQRankSum=-3.861;QD=2.35;ReadPosRankSum=-3.202;VQSLOD=0.7597;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:25:3.01:31,3,0	1/1:11,1:12:4.92:79,5,0	./.	./.	1/1:16,0:13:5.69:44,6,0	1/1:12,0:12:3.01:32,3,0	0/1:17,0:15:0.01:0,0,0	./.	1/1:43,0:43:15.51:165,16,0	1/1:32,0:31:1.92:25,2,0	0/1:13,0:13:0:0,0,0	1/1:27,0:27:21:216,21,0	1/1:22,0:24:8.20:52,8,0	1/1:33,0:33:9.02:99,9,0	0/1:26,1:27:47.57:74,0,48	1/1:23,0:23:8.70:68,9,0	1/1:14,13:27:11.24:121,11,0	0/0:14,0:16:4.65:0,5,25	1/1:18,0:17:6.01:61,6,0	1/1:17,0:14:2.79:14,3,0	1/1:61,0:56:4.56:36,5,0	1/1:14,0:14:3:25,3,0	1/1:17,0:17:2.98:21,3,0	0/1:47,0:49:1.91:2,0,49	0/0:21,0:20:2.11:0,2,7	1/1:19,0:18:6.01:61,6,0	1/1:20,0:20:17.95:159,18,0	1/1:11,0:10:5.85:46,6,0
chr10	90961205	.	C	CAT	1038.17	PASS	AB=0.875;AC=13;AF=0.241;AN=54;BaseQRankSum=4.332;DP=654;FS=0.521;HRun=0;HaplotypeScore=257.6014;InbreedingCoeff=-0.3277;MQ=41.87;MQ0=26;MQRankSum=-4.254;QD=3.13;ReadPosRankSum=-1.261;VQSLOD=2.3546;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:23.39:0,23,306	0/0:13,0:13:2:0,2,117	./.	0/0:14,0:5:11.99:0,12,101	0/1:17,4:18:53.70:60,0,54	0/1:12,1:13:32.42:32,0,88	0/1:12,2:12:7.40:7,0,42	0/0:26,0:24:30.70:0,31,325	0/1:30,9:40:99:204,0,293	0/0:30,0:29:73.52:0,74,542	0/0:12,0:11:17.67:0,18,136	0/1:18,13:31:99:308,0,154	0/1:22,0:21:1.94:2,0,265	0/1:24,8:32:99:102,0,167	0/0:30,0:30:28.90:0,29,472	0/0:23,0:23:28.09:0,28,329	0/1:29,0:29:25.67:26,0,124	0/0:16,0:16:7.58:0,8,171	0/1:15,2:16:59.29:59,0,215	0/0:14,2:13:7.11:0,7,43	0/1:59,4:58:30.16:89,0,30	0/0:17,0:17:15.96:0,16,210	0/0:15,0:15:12.33:0,12,112	0/0:52,0:50:17.21:0,17,484	0/0:20,0:19:32.45:0,32,265	0/1:14,2:15:57.54:58,0,218	0/1:16,6:22:99:205,0,160	0/1:11,1:11:30.22:30,0,81
chr10	90963672	.	G	GCTT	12735.96	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=18.259;DP=670;FS=5.401;HRun=0;HaplotypeScore=124.2509;InbreedingCoeff=0.9914;MQ=90.63;MQ0=0;MQRankSum=-5.726;QD=53.07;ReadPosRankSum=1.489;VQSLOD=7.1551;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,2608	0/0:8,0:8:24.08:0,24,421	0/0:29,0:29:87.28:0,87,1566	0/0:27,0:27:81.24:0,81,1435	1/1:0,15:15:45.15:820,45,0	0/0:21,0:21:63.21:0,63,1144	0/0:20,0:20:57.20:0,57,1062	1/1:7,18:25:68.56:1138,69,0	1/1:4,20:24:69.24:1265,69,0	0/0:28,0:28:84.29:0,84,1566	0/0:22,0:22:66.23:0,66,1221	1/1:3,23:26:77.61:1430,78,0	0/0:17,0:17:51.17:0,51,951	1/1:0,23:23:69.24:1307,69,0	0/0:25,0:25:75.26:0,75,1360	0/0:23,0:23:69.18:0,69,1219	0/0:32,0:32:93.32:0,93,1722	0/0:29,0:29:84.29:0,84,1540	1/1:1,21:22:62.43:1170,62,0	1/1:1,17:18:51.17:1011,51,0	1/1:3,36:39:99:1927,108,0	0/0:21,0:21:60.19:0,60,1075	0/0:16,0:16:45.15:0,45,839	0/0:41,0:41:99:0,123,2274	0/0:22,0:21:60.20:0,60,1088	1/1:3,24:27:81.28:1519,81,0	1/1:0,18:17:51.17:972,51,0	1/1:0,3:3:9.03:177,9,0
chr10	90963673	.	GC	G	5679.27	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=20.254;DP=671;FS=7.242;HRun=1;HaplotypeScore=121.4332;InbreedingCoeff=0.9913;MQ=90.09;MQ0=0;MQRankSum=-6.092;QD=23.66;ReadPosRankSum=2.356;VQSLOD=4.5883;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,147,2293	0/0:8,0:8:24.07:0,24,355	0/0:29,0:29:86.66:0,87,1343	0/0:26,0:26:78.27:0,78,1238	1/1:1,15:16:47.23:381,47,0	0/0:21,0:21:60.20:0,60,956	0/0:21,0:21:63.16:0,63,956	1/1:7,18:25:64.35:455,64,0	1/1:3,20:23:57.92:498,58,0	0/0:28,0:28:84.29:0,84,1341	0/0:24,0:24:72.22:0,72,1106	1/1:4,23:27:76.81:676,77,0	0/0:17,0:17:51.17:0,51,815	1/1:0,23:23:68.46:581,68,0	0/0:25,0:25:75.26:0,75,1192	0/0:21,0:21:63.21:0,63,1003	0/0:32,0:32:96.30:0,96,1488	0/0:29,0:29:84.29:0,84,1334	1/1:1,21:22:62.81:549,63,0	1/1:1,17:18:50.87:468,51,0	1/1:2,36:38:99:953,110,0	0/0:22,0:22:60.19:0,60,934	0/0:16,0:16:48.15:0,48,744	0/0:41,0:41:99:0,123,1962	0/0:22,0:21:63.20:0,63,981	1/1:3,24:27:73.52:611,74,0	1/1:1,17:17:50.19:426,50,0	1/1:0,3:3:9:81,9,0
chr10	90965562	.	A	ACATT	7302.90	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-12.239;DP=709;FS=1.338;HRun=0;HaplotypeScore=136.9250;InbreedingCoeff=0.8973;MQ=75.18;MQ0=2;MQRankSum=1.762;QD=24.67;ReadPosRankSum=-0.716;VQSLOD=4.4015;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:90.29:0,90,1403	0/0:9,0:9:12.02:0,12,164	0/0:26,0:24:12.04:0,12,188	0/0:23,0:21:9.03:0,9,135	0/0:21,0:21:54.18:0,54,710	1/1:6,20:27:30.10:718,30,0	1/1:9,16:26:18.06:431,18,0	0/1:42,0:42:36.81:37,0,243	0/0:21,0:21:31.90:0,32,383	1/1:15,18:32:48.16:1099,48,0	1/1:3,10:13:30.06:644,30,0	0/0:39,0:39:75.22:0,75,908	1/1:17,11:30:24.08:558,24,0	0/0:21,0:21:33.69:0,34,408	0/0:32,0:32:69.24:0,69,1093	1/1:13,15:28:21.07:503,21,0	0/0:35,1:36:12.45:0,12,1157	1/1:3,13:16:27.09:646,27,0	0/0:23,0:22:19.74:0,20,219	0/0:15,0:15:37.67:0,38,459	0/0:39,0:39:46.22:0,46,646	1/1:4,21:26:52.42:1078,52,0	1/1:6,12:20:23.84:514,24,0	1/1:2,15:18:30.10:718,30,0	1/1:3,13:17:15.05:359,15,0	0/0:26,0:26:47.17:0,47,559	0/0:27,0:27:22.61:0,23,497	0/0:9,0:9:15.05:0,15,196
chr10	90965738	.	A	ATG	1586.65	PASS	AB=0.780;AC=11;AF=0.196;AN=56;BaseQRankSum=2.910;DP=907;FS=0.000;HRun=0;HaplotypeScore=161.6601;InbreedingCoeff=-0.2331;MQ=53.02;MQ0=17;MQRankSum=-0.672;QD=4.08;ReadPosRankSum=3.650;VQSLOD=2.7376;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,135,1649	0/0:12,0:12:27.08:0,27,333	0/0:14,0:9:9.02:0,9,104	0/0:18,0:9:3.01:0,3,38	0/1:18,10:28:23.44:23,0,242	0/0:36,0:36:84.23:0,84,1036	0/0:35,0:35:85.48:0,85,1038	0/1:57,4:51:99:244,0,566	0/1:19,9:28:99:117,0,291	0/0:35,0:33:87.09:0,87,1007	0/0:16,0:15:36.09:0,36,430	0/1:48,10:60:99:466,0,739	0/0:28,0:28:67.44:0,67,814	0/1:20,17:36:83.34:83,0,314	0/0:33,0:33:77.88:0,78,929	0/0:32,0:32:58.29:0,58,961	0/0:49,0:49:99:0,120,1472	0/0:27,0:27:48.33:0,48,790	0/1:23,2:22:99:136,0,394	0/1:13,16:29:76.29:76,0,179	0/1:33,26:58:52.22:52,0,458	0/0:28,0:26:62.73:0,63,699	0/0:31,0:31:68.57:0,69,875	0/0:43,0:43:99:0,108,1366	0/0:24,0:24:54.14:0,54,643	0/1:23,8:30:99:181,0,532	0/1:18,3:21:99:217,0,303	0/1:5,5:10:8.46:138,0,8
chr10	90966800	.	G	GGACA	2841.59	PASS	AB=0.891;AC=19;AF=0.339;AN=56;BaseQRankSum=-4.618;DP=609;FS=11.380;HRun=0;HaplotypeScore=113.6967;InbreedingCoeff=-0.1146;MQ=62.91;MQ0=13;MQRankSum=-1.650;QD=7.92;ReadPosRankSum=-1.660;VQSLOD=1.2958;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:27:52.30:0,52,448	0/0:13,0:13:35.75:0,36,285	0/0:28,0:14:40.94:0,41,331	0/0:49,0:16:18.63:0,19,198	0/1:16,0:15:74.96:136,0,75	0/1:16,0:15:58.44:58,0,165	0/1:15,0:18:10.35:10,0,231	1/1:31,0:30:82.97:676,83,0	0/1:19,0:19:65.84:181,0,66	0/1:24,0:26:37.58:38,0,316	0/0:13,0:13:20.96:0,21,171	0/1:17,0:19:53.12:157,0,53	0/1:15,0:24:2.89:3,0,192	0/1:16,0:16:14.13:193,0,14	0/0:28,0:31:54.80:0,55,597	0/1:18,0:28:14.87:15,0,350	0/0:17,0:17:50.86:0,51,545	0/1:4,0:11:14.44:14,0,70	0/1:19,0:20:2.11:227,0,2	0/1:14,0:14:11.94:197,0,12	0/1:32,0:34:16.33:469,0,16	0/0:26,0:27:47.92:0,48,406	0/0:12,0:12:23.93:0,24,191	0/0:14,0:15:10.36:0,10,180	0/0:18,0:18:38.96:0,39,328	1/1:16,0:16:13.01:301,13,0	0/1:21,0:23:95.79:258,0,96	0/1:3,20:25:9.13:77,0,9
chr10	90966960	.	TCCTCCTCCTCTC	T	4266.45	PASS	AB=1.000;AC=21;AF=0.389;AN=54;BaseQRankSum=7.049;DP=729;FS=3.056;HRun=0;HaplotypeScore=203.0982;InbreedingCoeff=0.7888;MQ=50.65;MQ0=42;MQRankSum=0.367;QD=17.27;ReadPosRankSum=0.812;VQSLOD=3.2885;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:54.15:0,54,1439	./.	0/0:53,0:11:3.01:0,3,35	0/0:87,0:14:1.34:0,1,4	1/1:5,7:12:3.01:34,3,0	0/0:31,0:29:46.64:0,47,928	0/0:38,0:36:48.64:0,49,1265	1/1:36,0:24:2.83:28,3,0	1/1:20,0:20:36.12:733,36,0	0/0:31,0:27:42.14:0,42,1023	0/0:9,0:9:15.05:0,15,481	1/1:19,0:15:24.08:583,24,0	0/0:18,0:18:30.10:0,30,681	1/1:19,0:18:21.07:448,21,0	0/0:26,0:25:42.13:0,42,997	0/0:19,0:18:33.11:0,33,878	0/0:38,0:36:46.46:0,46,1399	0/0:22,0:23:35.66:0,36,974	1/1:23,0:16:9.03:198,9,0	1/1:7,12:19:15.05:191,15,0	0/1:55,0:50:6.04:1177,0,6	0/0:14,0:13:15.05:0,15,419	0/0:8,0:7:15.05:0,15,385	0/0:38,0:37:72.25:0,72,1906	0/0:15,0:15:24.04:0,24,521	1/1:11,14:22:35.26:585,35,0	1/1:11,0:11:9.02:163,9,0	1/1:8,0:7:6.02:126,6,0
chr10	90967494	.	T	TTC	805.88	PASS	AB=0.939;AC=22;AF=0.407;AN=54;BaseQRankSum=8.711;DP=278;FS=4.059;HRun=0;HaplotypeScore=50.2585;InbreedingCoeff=-0.1040;MQ=49.03;MQ0=6;MQRankSum=3.129;QD=4.40;ReadPosRankSum=0.906;VQSLOD=1.1186;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:8:42.23:42,0,212	0/0:2,0:2:3.01:0,3,41	0/0:9,0:5:12.04:0,12,164	0/0:9,0:6:10.95:0,11,86	0/1:5,3:7:72.46:72,0,107	0/1:18,0:18:49.21:52,0,49	0/1:11,0:10:1.36:105,0,1	0/1:25,0:22:94.37:94,0,550	0/0:15,0:15:7.70:0,8,543	0/1:10,0:10:30.36:38,0,30	0/0:4,0:4:1.41:0,1,10	0/1:18,3:21:99:127,0,604	1/1:3,0:3:4.78:36,5,0	0/1:11,1:12:32.29:32,0,378	0/0:9,0:8:23.87:0,24,299	1/1:10,0:10:12.63:32,13,0	0/1:8,1:10:29.67:30,0,223	1/1:2,1:3:4.73:63,5,0	0/1:9,1:9:59.07:59,0,216	0/0:13,0:13:12.82:0,13,394	0/0:4,0:4:1.08:0,1,110	1/1:9,0:8:2.26:35,2,0	1/1:7,0:6:6.64:107,7,0	0/1:7,0:6:12.53:32,0,13	0/0:9,0:10:1.40:0,1,21	0/0:19,0:18:2.02:0,2,605	0/1:11,0:10:4.33:4,0,373	./.
chr10	90967684	.	AG	A	6554.82	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=17.729;DP=547;FS=6.442;HRun=4;HaplotypeScore=84.0240;InbreedingCoeff=0.9768;MQ=83.09;MQ0=0;MQRankSum=-4.220;QD=31.51;ReadPosRankSum=2.023;VQSLOD=5.3672;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1546	0/0:5,0:5:12.04:0,12,168	0/0:19,0:19:57.13:0,57,763	0/0:20,0:20:57.14:0,57,758	1/1:1,15:16:36.11:432,36,0	0/0:21,0:21:57.18:0,57,774	0/0:27,0:27:76.12:0,76,1034	1/1:2,13:15:39.12:466,39,0	1/1:1,21:22:63.19:753,63,0	0/0:23,0:23:66.21:0,66,907	0/0:11,0:11:27.09:0,27,377	1/1:3,19:22:51.16:612,51,0	0/0:16,0:16:48.16:0,48,672	1/1:0,19:19:57.17:679,57,0	0/0:16,0:15:42.14:0,42,588	0/0:15,1:16:12.15:0,12,579	0/0:28,0:28:84.28:0,84,1176	0/0:19,0:19:51.17:0,51,713	1/1:3,14:17:42.10:490,42,0	1/1:0,12:12:36.11:431,36,0	1/1:1,37:38:99:1259,105,0	0/0:11,0:11:30.10:0,30,420	0/0:14,0:14:39.13:0,39,544	0/0:40,0:40:99:0,117,1639	0/0:13,0:13:33.10:0,33,462	1/1:3,15:18:6.46:498,6,0	1/1:0,18:18:54.17:648,54,0	1/1:0,11:11:24.07:287,24,0
chr10	90968232	.	AGGAGGCTGGAGGGAGGAGGGAGGAGGGAGGAGGGAGGAGGAGGGG	A	7454.71	PASS	AB=0.889;AC=24;AF=0.429;AN=56;BaseQRankSum=5.212;DP=409;FS=26.846;HRun=0;HaplotypeScore=415.2833;InbreedingCoeff=0.6471;MQ=61.27;MQ0=0;MQRankSum=-3.523;QD=31.59;ReadPosRankSum=-0.829;VQSLOD=1.9743;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:36.89:37,0,3555	0/0:6,0:6:12.01:0,12,271	0/0:7,0:4:10.85:0,11,174	0/0:17,0:12:10.37:0,10,244	1/1:1,20:21:20.93:294,21,0	0/0:16,0:16:45.04:0,45,1919	0/0:13,0:13:33.05:0,33,1175	1/1:16,0:16:39.09:590,39,0	1/1:21,0:21:54.13:1106,54,0	0/0:10,0:10:26.45:0,26,1443	0/0:8,0:8:18.05:0,18,712	1/1:16,0:16:45.09:1099,45,0	0/0:13,0:13:39.11:0,39,1500	1/1:17,0:17:48.04:837,48,0	0/0:9,0:9:24.07:0,24,1298	0/1:20,0:20:56.66:57,0,1617	0/0:14,0:14:39.11:0,39,1633	0/1:8,0:8:35.29:35,0,579	1/1:2,8:10:21.06:474,21,0	1/1:1,13:14:5.99:59,6,0	1/1:32,0:32:48.06:926,48,0	0/0:12,0:12:32.96:0,33,1301	0/0:7,0:7:17.99:0,18,431	0/0:34,0:34:53.79:0,54,2730	0/0:6,0:6:18:0,18,806	0/1:4,16:20:99:1083,0,269	1/1:16,0:16:33.08:837,33,0	1/1:1,0:1:2.98:21,3,0
chr10	90968256	.	AGGG	A	1399.50	PASS	AB=0.829;AC=12;AF=0.231;AN=52;BaseQRankSum=8.946;DP=353;FS=18.912;HRun=3;HaplotypeScore=115.7114;InbreedingCoeff=0.0482;MQ=58.63;MQ0=5;MQRankSum=-9.077;QD=9.86;ReadPosRankSum=0.575;VQSLOD=-0.6686;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.16:0,54,1165	0/0:1,0:1:3.01:0,3,72	0/0:10,0:5:4.15:0,4,77	0/0:21,0:13:12.95:0,13,129	./.	0/0:13,0:13:39.09:0,39,782	0/0:11,0:10:24.05:0,24,436	1/1:1,0:1:2.98:21,3,0	0/1:17,5:22:99:156,0,165	0/0:14,0:13:39.12:0,39,831	0/0:6,0:6:15.05:0,15,340	0/1:12,7:19:7.54:395,0,8	0/0:14,0:14:34.64:0,35,617	0/1:8,2:10:68.21:152,0,68	0/0:9,0:9:27.06:0,27,498	0/1:9,1:10:39.11:39,0,525	0/0:14,0:14:37.92:0,38,736	0/1:6,0:6:13.24:13,0,223	1/1:12,0:8:3.01:53,3,0	./.	0/1:22,9:31:99:268,0,104	0/0:4,0:4:12.04:0,12,295	0/0:5,0:5:11.98:0,12,215	0/0:24,0:22:53.63:0,54,1050	0/0:13,0:12:30.06:0,30,534	0/1:19,0:18:99:190,0,146	0/1:3,9:12:2.37:254,0,2	0/0:1,0:1:3:0,3,27
chr10	90968269	.	G	GA	2736.09	PASS	AB=1.000;AC=17;AF=0.340;AN=50;BaseQRankSum=9.677;DP=343;FS=13.505;HRun=1;HaplotypeScore=102.8520;InbreedingCoeff=0.7641;MQ=61.72;MQ0=5;MQRankSum=-7.211;QD=16.99;ReadPosRankSum=0.217;VQSLOD=2.6906;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.06:0,39,485	./.	0/0:10,0:8:1.71:0,2,65	0/0:15,0:10:15.79:0,16,200	1/1:20,0:20:5.98:58,6,0	0/0:14,0:14:39.10:0,39,479	0/0:7,0:6:15.03:0,15,180	1/1:2,6:8:21.04:289,21,0	1/1:7,20:27:55.27:869,55,0	0/0:14,0:14:40.35:0,40,476	0/0:6,0:6:12.04:0,12,155	1/1:8,13:21:28.90:525,29,0	0/0:9,0:9:18.06:0,18,234	1/1:3,8:11:18.64:310,19,0	0/0:10,0:10:30.07:0,30,363	0/0:8,0:8:22.18:0,22,251	0/0:12,0:12:9.15:0,9,329	0/0:6,0:6:5.35:0,5,164	1/1:11,0:8:2.94:18,3,0	./.	1/1:12,21:33:45.65:501,46,0	0/0:6,0:6:12.04:0,12,156	0/0:6,0:6:15.05:0,15,195	0/0:14,0:12:24.01:0,24,290	0/0:16,0:15:39.11:0,39,479	0/1:20,0:19:91.70:171,0,92	1/1:7,3:10:7.91:178,8,0	./.
chr10	90968270	.	A	AAGAG	203.76	PASS	AB=0.936;AC=7;AF=0.140;AN=50;BaseQRankSum=5.241;DP=339;FS=0.000;HRun=0;HaplotypeScore=130.4842;InbreedingCoeff=0.0653;MQ=61.87;MQ0=5;MQRankSum=-5.002;QD=2.08;ReadPosRankSum=-0.184;VQSLOD=1.7191;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:38.34:0,38,743	./.	0/0:11,0:8:7.53:0,8,117	0/0:15,0:10:20.87:0,21,305	1/1:20,0:20:1.36:3,1,0	0/0:13,0:13:39.12:0,39,755	0/0:7,0:6:15.04:0,15,256	0/1:8,0:8:4.56:5,0,5	0/0:26,0:26:18.89:0,19,120	0/0:14,0:14:39.59:0,40,711	0/0:6,0:6:11.94:0,12,216	0/1:20,1:21:42.93:43,0,59	0/0:9,0:9:18.06:0,18,366	0/0:11,0:11:6.89:0,7,55	0/0:10,0:10:30.02:0,30,549	0/0:8,0:8:22.32:0,22,402	0/0:11,0:11:10.20:0,10,482	0/1:5,1:6:65.21:65,0,272	0/0:11,0:8:3.54:0,4,31	./.	0/1:28,3:33:63.30:191,0,63	0/0:6,0:6:15.03:0,15,241	0/0:6,0:6:16.61:0,17,305	0/0:12,0:10:25.33:0,25,458	0/0:16,0:15:39.08:0,39,716	0/0:20,0:19:15.56:0,16,199	0/1:10,0:10:0.75:1,0,55	./.
chr10	90969220	.	C	CTT	13551.17	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-17.043;DP=716;FS=6.533;HRun=1;HaplotypeScore=84.6800;InbreedingCoeff=0.9988;MQ=91.01;MQ0=0;MQRankSum=-2.312;QD=50.94;ReadPosRankSum=-0.065;VQSLOD=4.3088;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1997	0/0:7,0:7:21.07:0,21,321	0/0:24,0:23:58.04:0,58,780	0/0:38,0:38:48.47:0,48,772	1/1:0,16:16:48.16:927,48,0	0/0:21,0:21:63.20:0,63,943	0/0:23,0:23:66.20:0,66,986	1/1:1,37:39:99:2017,111,0	1/1:2,20:24:45.11:831,45,0	0/0:33,0:33:99:0,99,1479	0/0:18,0:18:48.14:0,48,694	1/1:1,18:19:51.17:985,51,0	0/0:19,0:19:57.15:0,57,804	1/1:0,22:22:57.15:1061,57,0	0/0:19,0:19:54.17:0,54,800	0/0:26,0:25:75.25:0,75,1144	0/0:50,0:50:99:0,151,2288	0/0:23,0:23:69.23:0,69,1056	1/1:2,15:18:48.14:891,48,0	1/1:0,18:18:54.19:1043,54,0	1/1:2,48:51:99:2550,132,0	0/0:24,0:24:69.22:0,69,1033	0/0:25,0:25:75.24:0,75,1127	0/0:41,0:41:99:0,120,1813	0/0:13,0:13:39.13:0,39,595	1/1:0,31:31:93.32:1797,93,0	1/1:1,20:21:54.19:1043,54,0	1/1:0,7:7:21.07:405,21,0
chr10	90970177	.	CG	C	7906.69	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=13.761;DP=650;FS=1.327;HRun=4;HaplotypeScore=76.9157;InbreedingCoeff=0.9725;MQ=83.31;MQ0=0;MQRankSum=-1.161;QD=31.25;ReadPosRankSum=0.294;VQSLOD=5.1684;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1506	0/0:8,0:8:24.03:0,24,297	0/0:24,0:24:56.85:0,57,717	0/0:13,0:13:35.85:0,36,410	1/1:0,15:15:42.13:495,42,0	0/0:21,0:21:60.10:0,60,777	0/0:38,0:38:99:0,105,1435	1/1:2,20:22:57.07:630,57,0	1/1:0,23:23:69.21:826,69,0	0/0:28,0:28:84.26:0,84,1129	0/0:18,0:18:54.14:0,54,721	1/1:2,28:30:69.21:824,69,0	0/0:25,0:25:75.24:0,75,1031	1/1:0,23:23:69.21:825,69,0	0/0:25,0:25:63.20:0,63,861	0/0:15,0:15:42.13:0,42,571	0/0:36,0:36:99:0,102,1398	0/0:27,0:27:78.22:0,78,1064	1/1:3,26:29:78.20:918,78,0	1/1:0,18:18:50.94:586,51,0	1/1:0,39:39:99:1257,105,0	0/0:17,0:17:51.16:0,51,694	0/0:24,0:24:72.23:0,72,985	0/0:17,0:17:48.16:0,48,671	0/0:20,0:20:60.15:0,60,792	1/1:2,31:33:15.41:974,15,0	1/1:1,16:17:45.14:538,45,0	1/1:2,2:4:3.01:36,3,0
chr10	90970435	.	TA	T	2184.74	PASS	AB=0.615;AC=21;AF=0.375;AN=56;BaseQRankSum=-1.075;DP=627;FS=2.287;HRun=14;HaplotypeScore=114.9749;InbreedingCoeff=0.8825;MQ=71.50;MQ0=0;MQRankSum=-0.750;QD=9.67;ReadPosRankSum=6.275;VQSLOD=2.8469;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,3:37:36.88:0,37,611	0/0:13,0:14:23.18:0,23,241	0/0:20,0:15:1.94:0,2,47	0/0:12,0:11:11.75:0,12,96	0/0:13,1:27:47.56:0,48,287	1/1:6,14:23:44.74:285,45,0	1/1:8,12:20:26.67:184,27,0	0/0:11,0:27:49:0,49,294	0/0:7,0:26:54.20:0,54,298	1/1:10,16:26:47.51:327,48,0	1/1:3,7:10:13.41:100,13,0	0/0:13,0:32:44.51:0,45,304	1/1:2,10:12:23.79:164,24,0	0/0:6,0:22:28.92:0,29,182	0/0:28,0:29:65.75:0,66,573	1/1:7,13:21:31.74:211,32,0	0/0:26,0:27:70.25:0,70,612	0/1:6,9:16:2.08:124,0,2	0/0:4,0:17:30.85:0,31,198	0/0:16,0:31:55.40:0,55,342	0/0:6,0:18:28.71:0,29,158	1/1:9,19:30:38.73:257,39,0	1/1:4,14:19:30.88:210,31,0	1/1:2,29:34:62.62:408,63,0	1/1:6,8:15:1.52:125,2,0	0/0:10,0:21:46.81:0,47,317	0/0:8,0:29:51.58:0,52,279	0/0:1,0:12:19.89:0,20,101
chr10	90975652	.	A	AT	9610.86	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-11.909;DP=651;FS=1.341;HRun=4;HaplotypeScore=102.5650;InbreedingCoeff=0.9990;MQ=81.69;MQ0=0;MQRankSum=-4.810;QD=37.11;ReadPosRankSum=0.926;VQSLOD=4.0630;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:93.25:0,93,1045	0/0:10,0:10:30.09:0,30,340	0/0:22,0:22:45.01:0,45,472	0/0:17,0:17:36.08:0,36,392	1/1:1,20:21:57.15:758,57,0	0/0:20,0:20:60.17:0,60,681	0/0:27,0:27:66.18:0,66,749	1/1:0,27:27:81.23:1059,81,0	1/1:0,22:22:66.22:902,66,0	0/0:29,0:29:78.22:0,78,879	0/0:13,0:13:36.10:0,36,408	1/1:3,21:24:63.21:854,63,0	0/0:17,0:17:45.13:0,45,510	1/1:3,23:26:69.23:943,69,0	0/0:31,0:31:84.22:0,84,941	0/0:22,1:23:19.39:0,19,606	0/0:30,0:30:75.21:0,75,851	0/0:21,0:21:60.17:0,60,679	1/1:5,19:24:60.19:805,60,0	1/1:1,23:24:69.23:943,69,0	1/1:2,20:22:57.18:763,57,0	0/0:25,0:25:60.15:0,60,669	0/0:21,0:21:48.13:0,48,544	0/0:29,0:29:81.23:0,81,918	0/0:22,0:22:51.13:0,51,569	1/1:2,22:24:66.22:903,66,0	1/1:0,28:28:78.26:1066,78,0	1/1:2,15:17:45.15:615,45,0
chr10	90976831	.	C	CATAT	8354.27	PASS	AB=0.980;AC=25;AF=0.446;AN=56;BaseQRankSum=-8.560;DP=732;FS=3.210;HRun=0;HaplotypeScore=144.0167;InbreedingCoeff=0.8064;MQ=65.36;MQ0=0;MQRankSum=-0.623;QD=27.57;ReadPosRankSum=0.062;VQSLOD=4.5541;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:26:54.13:0,54,808	0/0:9,0:9:18.06:0,18,309	0/1:24,0:17:0:10,0,0	0/1:16,0:14:16.65:17,0,37	0/0:36,0:36:64.50:0,64,1468	1/1:16,9:28:54.07:988,54,0	1/1:5,5:10:9.03:204,9,0	0/0:35,0:36:93.28:0,93,1476	0/0:43,0:43:87.09:0,87,1430	1/1:9,26:37:76.82:1607,77,0	1/1:10,15:27:29.88:755,30,0	0/0:37,0:38:84.24:0,84,1315	1/1:6,11:18:32.58:748,33,0	0/0:33,0:33:66.07:0,66,1124	0/0:48,0:48:99:0,108,1675	1/1:8,23:31:42.14:1049,42,0	0/0:16,0:16:48.16:0,48,820	1/1:7,9:19:41.46:781,41,0	0/0:16,0:16:35.79:0,36,577	0/0:26,0:26:69.18:0,69,1057	0/0:35,0:35:86.88:0,87,1452	1/1:4,9:13:21.07:529,21,0	1/1:3,10:13:15.05:378,15,0	1/1:6,4:10:11.99:291,12,0	1/1:6,18:26:41.92:926,42,0	0/1:29,2:31:72.89:73,0,1082	0/0:41,0:41:99:0,102,1625	0/0:26,0:26:72.16:0,72,1104
chr10	90977006	.	GCACACACACA	G	10989.25	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=7.175;DP=666;FS=5.614;HRun=0;HaplotypeScore=239.0077;InbreedingCoeff=0.8538;MQ=48.26;MQ0=37;MQRankSum=-4.941;QD=24.10;ReadPosRankSum=4.059;VQSLOD=3.2725;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:48.63:0,49,1929	0/0:9,0:11:19.42:0,19,533	0/0:43,0:7:3.01:0,3,51	0/0:42,0:15:6.02:0,6,104	1/1:11,3:17:21.01:357,21,0	1/1:10,0:14:5.98:356,6,0	1/1:20,0:18:12.77:71,13,0	1/1:36,0:35:20.94:292,21,0	1/1:14,11:24:36.10:987,36,0	1/1:19,0:19:22.90:352,23,0	1/1:15,0:14:8.87:107,9,0	1/1:17,9:25:45.15:1134,45,0	1/1:10,0:20:35.46:730,35,0	1/1:16,3:18:18.06:449,18,0	0/0:26,0:32:51.16:0,51,1941	1/1:10,0:18:30.09:636,30,0	0/0:44,0:45:85.66:0,86,3956	1/1:19,0:22:16.74:249,17,0	1/1:15,3:19:6.54:550,7,0	1/1:13,3:16:18.06:439,18,0	1/1:33,1:33:32.80:632,33,0	1/1:8,0:16:12.02:233,12,0	1/1:13,0:19:17.91:318,18,0	1/1:14,0:14:8.19:107,8,0	1/1:9,0:14:32.54:575,33,0	1/1:19,7:26:39.11:898,39,0	1/1:10,12:21:42.14:1174,42,0	1/1:4,2:6:15.05:342,15,0
chr10	90977030	.	ACAC	A	2355.09	PASS	AB=0.901;AC=21;AF=0.375;AN=56;BaseQRankSum=13.250;DP=623;FS=12.137;HRun=0;HaplotypeScore=185.3634;InbreedingCoeff=-0.4439;MQ=45.08;MQ0=37;MQRankSum=-10.833;QD=6.43;ReadPosRankSum=9.527;VQSLOD=0.7381;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:77.85:0,78,1331	0/0:11,0:11:24.43:0,24,349	0/0:31,0:6:14.08:0,14,157	0/0:41,0:8:21:0,21,265	0/1:15,0:15:47.23:47,0,169	0/1:14,1:15:92.55:155,0,93	0/1:13,3:18:34.40:219,0,34	0/0:30,0:28:77.16:0,77,823	0/1:23,0:22:91.89:92,0,313	0/1:16,2:15:99:289,0,106	0/1:8,1:8:46.99:97,0,47	0/1:25,0:24:47.29:47,0,318	0/1:16,3:19:64.96:286,0,65	0/1:14,0:13:13.31:13,0,234	0/0:36,0:36:83.99:0,84,1514	1/1:13,1:13:30.54:238,31,0	0/0:42,0:42:88.15:0,88,2314	0/1:17,2:20:99:141,0,327	0/1:21,0:19:28.26:28,0,354	0/1:20,0:19:21.13:21,0,330	0/0:31,0:29:50.75:0,51,511	0/1:11,1:13:19.85:119,0,20	0/1:11,3:16:16.87:152,0,17	0/1:12,3:14:94.71:110,0,95	0/1:15,1:17:32.15:304,0,32	0/1:24,0:24:41.03:41,0,426	0/1:25,0:24:99:101,0,324	0/1:9,0:9:21.35:21,0,119
chr10	90977058	.	T	TA	10164.65	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-2.665;DP=640;FS=3.084;HRun=9;HaplotypeScore=138.1695;InbreedingCoeff=0.9651;MQ=58.43;MQ0=7;MQRankSum=-1.317;QD=21.31;ReadPosRankSum=-4.917;VQSLOD=2.3505;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:86.96:0,87,752	0/0:8,0:8:20.84:0,21,182	0/0:21,0:11:26.81:0,27,224	0/0:29,1:15:16.63:0,17,185	1/1:4,17:21:18.99:389,19,0	1/1:4,20:24:54.15:597,54,0	1/1:3,18:21:39.11:431,39,0	1/1:5,27:32:55.05:797,55,0	1/1:7,18:25:5.66:452,6,0	1/1:5,9:14:27.07:297,27,0	1/1:5,9:14:23.98:248,24,0	1/1:6,17:23:45.12:498,45,0	1/1:2,20:23:56.99:609,57,0	1/1:2,15:17:35.99:367,36,0	0/0:31,1:32:47.73:0,48,635	1/1:4,19:22:42.06:450,42,0	0/0:38,0:38:77.90:0,78,670	1/1:7,18:24:45.12:498,45,0	1/1:12,19:31:31.78:633,32,0	1/1:5,17:22:48.10:518,48,0	1/1:5,20:24:28.59:537,29,0	1/1:2,8:10:24.02:252,24,0	1/1:6,10:16:23.77:250,24,0	1/1:5,13:18:30.55:333,31,0	1/1:2,20:22:48.13:531,48,0	1/1:9,17:26:51.14:564,51,0	1/1:9,26:35:72.15:782,72,0	1/1:2,6:8:12.03:133,12,0
chr10	90977606	.	T	TA	7260.03	PASS	AB=0.685;AC=42;AF=0.750;AN=56;BaseQRankSum=-8.338;DP=528;FS=15.199;HRun=11;HaplotypeScore=57.1150;InbreedingCoeff=0.5765;MQ=81.94;MQ0=1;MQRankSum=-2.725;QD=17.75;ReadPosRankSum=-1.213;VQSLOD=4.0488;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:37:76.64:0,77,586	0/0:12,0:12:32.87:0,33,255	0/0:16,0:16:17.87:0,18,132	0/1:12,0:15:22.11:22,0,60	1/1:7,12:19:12.76:290,13,0	1/1:3,11:14:33.07:335,33,0	1/1:4,17:21:23.96:405,24,0	1/1:11,24:35:21.11:563,21,0	1/1:2,13:16:15.77:330,16,0	1/1:11,10:22:35.90:344,36,0	1/1:4,10:14:0.77:179,1,0	1/1:3,13:16:33.06:332,33,0	1/1:2,15:18:35.87:338,36,0	1/1:3,8:12:20.87:192,21,0	0/0:24,0:24:53.76:0,54,418	1/1:2,9:11:27.05:274,27,0	0/0:30,0:30:77.61:0,78,596	1/1:4,22:27:33.71:509,34,0	1/1:3,14:17:42.07:418,42,0	1/1:1,12:14:35.83:328,36,0	1/1:4,25:30:36.72:539,37,0	0/1:6,9:15:14.30:212,0,14	1/1:3,6:9:12.02:122,12,0	1/1:2,18:21:30.70:478,31,0	1/1:6,8:15:29.89:283,30,0	1/1:6,18:24:33.78:506,34,0	0/1:8,12:20:53.87:235,0,54	0/1:1,2:3:15.25:24,0,15
chr10	90978377	.	T	TCC	8119.31	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=5.361;DP=525;FS=40.383;HRun=8;HaplotypeScore=79.4748;InbreedingCoeff=0.9613;MQ=88.19;MQ0=0;MQRankSum=-3.976;QD=21.88;ReadPosRankSum=2.645;VQSLOD=1.3142;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:41:81.35:0,81,1071	0/0:7,0:7:18.04:0,18,192	0/0:21,0:22:38.90:0,39,390	0/0:28,0:26:49.36:0,49,485	1/1:4,4:10:20.54:256,21,0	1/1:22,0:22:60.10:588,60,0	1/1:22,0:22:36.06:349,36,0	1/1:9,7:17:15.05:234,15,0	1/1:4,14:18:39.13:619,39,0	1/1:27,0:27:68.57:655,69,0	1/1:10,0:10:30.06:299,30,0	1/1:2,16:18:27.09:428,27,0	1/1:24,0:24:56.90:572,57,0	1/1:2,8:10:14.54:199,15,0	0/0:25,0:25:63.15:0,63,702	1/1:22,0:22:54.08:517,54,0	0/0:30,0:30:54.30:0,54,855	1/1:15,0:15:39.07:388,39,0	1/1:11,7:20:27.42:351,27,0	1/1:6,2:9:14.33:135,14,0	1/1:7,12:21:20.04:255,20,0	1/1:13,0:13:33.07:343,33,0	1/1:10,0:10:23.50:275,24,0	1/1:30,0:30:81.16:816,81,0	1/1:11,0:11:21.03:202,21,0	1/1:14,3:18:26.38:256,26,0	1/1:2,15:18:17.34:288,17,0	1/1:0,5:5:6.02:95,6,0
chr10	90978382	.	C	CCT	10206.13	PASS	AB=0.976;AC=37;AF=0.661;AN=56;BaseQRankSum=-7.656;DP=519;FS=37.898;HRun=0;HaplotypeScore=69.4966;InbreedingCoeff=0.4121;MQ=86.01;MQ0=0;MQRankSum=-2.733;QD=27.81;ReadPosRankSum=6.949;VQSLOD=3.3416;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,115,1583	0/0:6,0:6:18.06:0,18,266	0/0:23,0:22:51.07:0,51,651	0/0:26,0:24:56.67:0,57,719	1/1:9,0:9:9.58:96,10,0	1/1:0,20:20:60.21:1077,60,0	1/1:1,23:24:36.12:645,36,0	0/1:16,0:16:75.77:76,0,86	0/1:18,0:18:13.97:227,0,14	1/1:2,25:28:72.23:1260,72,0	1/1:0,11:12:30.99:540,31,0	1/1:16,0:16:26.81:194,27,0	1/1:0,24:24:56.99:1022,57,0	1/1:10,0:10:6.87:75,7,0	0/0:24,0:24:66.20:0,66,962	1/1:0,23:24:54.19:968,54,0	0/0:32,1:33:45.42:0,45,1275	1/1:0,15:15:39.13:700,39,0	0/1:16,0:16:34.85:141,0,35	0/1:8,0:8:28.09:29,0,28	0/1:18,0:18:39.46:80,0,39	1/1:1,12:13:33.11:591,33,0	1/1:1,13:14:23.56:418,24,0	1/1:0,33:33:81.28:1453,81,0	1/1:2,8:10:21.06:377,21,0	0/1:12,1:15:53.03:87,0,53	0/1:19,0:18:31.23:106,0,31	1/1:5,0:5:5.97:44,6,0
chr10	90979359	.	G	GGC	767.69	PASS	AB=0.833;AC=44;AF=0.957;AN=46;BaseQRankSum=-0.979;DP=151;FS=3.415;HRun=0;HaplotypeScore=92.0826;InbreedingCoeff=0.1953;MQ=43.87;MQ0=0;MQRankSum=-0.301;QD=5.56;ReadPosRankSum=0.678;VQSLOD=2.8804;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,5:8:19.90:156,20,0	1/1:0,1:1:2.98:22,3,0	0/1:1,0:2:0:0,0,0	./.	1/1:8,0:8:12.11:34,12,0	1/1:9,0:9:8.52:24,9,0	./.	1/1:9,0:9:10.78:76,11,0	1/1:3,0:3:5.19:14,5,0	1/1:13,0:13:16.93:49,17,0	1/1:9,0:9:5.67:16,6,0	1/1:4,0:4:7.49:20,7,0	1/1:5,0:5:4.07:11,4,0	1/1:5,0:5:7.71:21,8,0	1/1:5,3:8:23.79:183,24,0	1/1:7,0:7:7.23:21,7,0	1/1:1,0:1:3.01:45,3,0	./.	./.	1/1:9,0:9:10.74:30,11,0	1/1:4,0:4:2.96:19,3,0	1/1:5,0:5:3.63:10,4,0	1/1:8,0:8:7.88:22,8,0	./.	1/1:7,0:7:12.68:37,13,0	1/1:7,0:7:7.76:21,8,0	1/1:4,0:4:3.85:11,4,0	0/1:2,0:2:0.52:1,0,1
chr10	90979560	.	C	CAAAA	6957.08	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-2.299;DP=426;FS=25.778;HRun=13;HaplotypeScore=82.0131;InbreedingCoeff=0.6912;MQ=68.82;MQ0=0;MQRankSum=-2.324;QD=19.82;ReadPosRankSum=-4.928;VQSLOD=0.2677;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:24:2:0,2,440	0/0:5,0:5:11.94:0,12,152	0/0:13,0:12:5.79:0,6,53	0/1:10,0:10:27.42:27,0,59	1/1:5,1:8:20.97:272,21,0	1/1:1,3:18:21.07:362,21,0	1/1:7,7:19:30.10:536,30,0	1/1:15,1:26:33.08:529,33,0	1/1:11,0:11:12.02:181,12,0	1/1:19,6:26:43.92:710,44,0	1/1:4,0:12:17.96:211,18,0	1/1:3,0:9:8.95:134,9,0	1/1:2,9:12:2.32:65,2,0	1/1:4,0:15:11.87:163,12,0	0/0:10,0:13:19.01:0,19,201	1/1:5,12:19:17.98:305,18,0	0/0:18,0:20:46.43:0,46,534	1/1:7,3:19:24.08:403,24,0	1/1:13,0:14:21.06:353,21,0	1/1:5,5:11:25.88:384,26,0	1/1:4,4:9:3.01:67,3,0	1/1:13,2:15:30.46:470,30,0	1/1:3,9:12:14.73:249,15,0	1/1:12,0:12:12.49:170,12,0	1/1:4,5:10:14.21:165,14,0	1/1:10,7:24:34.74:567,35,0	1/1:6,3:20:21.12:345,21,0	1/1:3,9:17:16.26:287,16,0
chr10	90981025	.	CATCTATCTATCT	C	10127.49	PASS	AB=0.988;AC=42;AF=0.778;AN=54;BaseQRankSum=8.405;DP=587;FS=17.443;HRun=0;HaplotypeScore=291.3605;InbreedingCoeff=0.6389;MQ=51.05;MQ0=4;MQRankSum=-8.441;QD=21.69;ReadPosRankSum=-2.393;VQSLOD=2.1249;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:41:59.22:0,59,2950	0/0:16,0:16:27.09:0,27,1152	1/1:10,0:7:0.47:1,0,0	./.	1/1:29,4:33:18.06:388,18,0	1/1:26,0:26:39.13:626,39,0	0/1:10,0:10:0:0,0,0	1/1:34,0:32:27.08:407,27,0	0/1:18,1:19:18.86:603,0,19	1/1:27,0:27:47.84:966,48,0	1/1:15,0:15:11.95:139,12,0	1/1:19,2:21:33.11:799,33,0	1/1:16,0:16:12.04:283,12,0	1/1:15,3:18:18.06:435,18,0	0/0:27,0:27:45.14:0,45,2173	1/1:27,0:27:41.20:530,41,0	0/0:11,0:26:35.58:0,36,908	0/1:21,0:21:29.20:260,0,29	1/1:17,0:16:18.06:440,18,0	1/1:17,4:21:21.07:400,21,0	1/1:13,0:13:2.92:66,3,0	1/1:14,0:14:12.04:204,12,0	1/1:20,0:20:17.87:233,18,0	0/1:13,0:15:0.19:0,0,0	1/1:25,0:25:39.19:693,39,0	1/1:26,4:30:56.86:1321,57,0	1/1:25,3:28:39.13:1046,39,0	1/1:6,0:6:12.04:287,12,0
chr10	90981036	.	CT	C	2177.51	PASS	AB=0.887;AC=19;AF=0.339;AN=56;BaseQRankSum=15.266;DP=585;FS=3.966;HRun=1;HaplotypeScore=254.1229;InbreedingCoeff=-0.5238;MQ=45.75;MQ0=6;MQRankSum=-13.636;QD=5.60;ReadPosRankSum=2.713;VQSLOD=0.7367;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:38:89.73:0,90,1433	0/0:17,0:17:51.17:0,51,786	0/1:7,1:5:0.40:0,0,169	0/0:8,0:4:6.02:0,6,91	0/0:25,8:33:47.84:0,48,705	0/1:26,0:28:99:133,0,165	0/1:13,0:13:2.17:2,0,64	0/1:24,6:28:99:124,0,715	0/1:15,5:20:99:224,0,234	0/0:26,0:27:13.85:0,14,626	0/1:15,0:17:32.84:33,0,161	0/1:15,4:19:99:258,0,172	0/1:22,0:22:29.15:29,0,77	0/1:11,3:14:99:146,0,140	0/0:25,0:25:75.26:0,75,1177	0/1:29,0:31:57.49:57,0,480	0/0:24,0:24:1.87:0,2,308	0/1:22,0:21:27.81:28,0,280	0/1:11,6:15:99:221,0,272	0/1:16,5:21:99:220,0,184	0/0:10,2:12:8.41:0,8,137	0/1:17,0:18:48.78:66,0,49	0/1:17,0:19:89.07:89,0,197	0/0:11,0:12:2.75:0,3,46	0/1:27,0:27:84.73:85,0,238	0/1:18,10:28:99:392,0,397	0/1:21,6:27:99:148,0,286	0/1:7,0:6:72.80:73,0,121
chr10	90981040	.	CT	C	1481.62	PASS	AB=0.822;AC=11;AF=0.196;AN=56;BaseQRankSum=12.903;DP=576;FS=1.342;HRun=1;HaplotypeScore=260.4201;InbreedingCoeff=-0.2330;MQ=46.44;MQ0=6;MQRankSum=-11.490;QD=6.70;ReadPosRankSum=3.115;VQSLOD=0.8198;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:83.71:0,84,1341	0/0:19,0:19:57.19:0,57,873	0/1:7,0:4:26.77:27,0,45	0/0:8,0:4:6.02:0,6,86	0/0:32,0:32:44.83:0,45,663	0/1:19,8:27:99:303,0,110	0/1:9,3:12:37.03:61,0,37	0/0:30,0:28:72.15:0,72,978	0/0:20,0:20:29.34:0,29,419	0/1:21,4:25:99:181,0,491	0/1:14,3:17:87.43:87,0,161	0/0:19,0:19:28.38:0,28,359	0/1:13,7:20:20.64:203,0,21	0/0:14,0:14:21.51:0,22,257	0/0:23,0:23:69.22:0,69,1065	0/1:24,6:30:99:160,0,381	0/0:26,1:27:7.81:0,8,435	0/1:17,5:20:99:169,0,261	0/0:17,0:15:35.07:0,35,522	0/0:20,0:20:27.72:0,28,351	0/0:13,0:13:14.01:0,14,185	0/1:11,6:17:6.75:127,0,7	0/1:14,4:18:99:152,0,154	0/0:7,5:12:2.75:0,3,46	0/1:20,6:26:99:159,0,235	0/0:29,1:30:15.39:0,15,783	0/0:27,0:27:29.36:0,29,432	0/0:8,0:7:16.03:0,16,227
chr10	90981070	.	TATATGA	T	977.89	PASS	AB=0.839;AC=15;AF=0.268;AN=56;BaseQRankSum=12.258;DP=570;FS=2.664;HRun=0;HaplotypeScore=300.2709;InbreedingCoeff=-0.3628;MQ=53.94;MQ0=2;MQRankSum=-9.707;QD=3.27;ReadPosRankSum=-3.417;VQSLOD=1.7889;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:70.70:0,71,2457	0/0:12,0:12:36.12:0,36,1310	0/0:20,0:17:11.11:0,11,1497	0/0:14,0:11:27.09:0,27,977	0/0:21,0:21:7.59:0,8,115	0/1:15,7:21:99:128,0,314	0/1:8,0:8:8.57:9,0,54	0/0:33,0:31:42.05:0,42,601	0/1:22,6:28:30.82:31,0,597	0/1:18,7:25:99:219,0,740	0/0:18,4:22:27.43:0,27,293	0/1:11,6:17:47.07:47,0,76	0/1:16,4:20:88.78:89,0,424	0/1:16,3:19:2.57:3,0,274	0/0:23,0:23:69.22:0,69,2446	0/1:20,5:25:34.15:34,0,435	0/0:26,0:26:63.62:0,64,2100	0/1:20,0:19:24.48:24,0,532	0/1:8,2:10:45.22:45,0,266	0/1:24,3:25:11.08:11,0,438	0/0:17,0:17:36:0,36,466	0/0:17,3:20:6.11:0,6,165	0/0:14,5:19:19.56:0,20,256	0/0:13,1:14:14.78:0,15,273	0/1:13,8:21:99:172,0,129	0/1:27,0:27:38.92:39,0,796	0/1:14,7:21:99:173,0,201	0/1:6,3:8:99:108,0,200
chr10	90981077	.	G	GTATC	21176.28	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=10.666;DP=640;FS=4.392;HRun=0;HaplotypeScore=237.6014;InbreedingCoeff=0.9651;MQ=54.22;MQ0=0;MQRankSum=-10.648;QD=41.44;ReadPosRankSum=-1.376;VQSLOD=4.1808;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:63.44:0,63,1211	0/0:13,0:13:36.12:0,36,672	0/0:21,0:19:51.16:0,51,894	0/0:14,0:12:30.10:0,30,512	1/1:6,15:23:5.47:160,5,0	1/1:10,15:24:54.19:1370,54,0	1/1:1,8:9:12.02:316,12,0	1/1:14,26:39:63.10:1173,63,0	1/1:10,20:30:56.96:1471,57,0	1/1:12,19:31:90.27:2290,90,0	1/1:6,18:24:27.09:700,27,0	1/1:8,9:17:23.97:590,24,0	1/1:8,16:24:45.15:1140,45,0	1/1:6,13:21:33.11:848,33,0	0/0:27,0:27:78.27:0,78,1448	1/1:7,21:29:42.14:1113,42,0	0/0:24,0:24:60.14:0,60,1087	1/1:2,19:20:42.51:1056,43,0	1/1:3,8:12:33.11:875,33,0	1/1:9,22:29:42.03:1097,42,0	1/1:3,23:26:23.63:639,24,0	1/1:5,15:20:20.97:514,21,0	1/1:7,15:23:32.84:857,33,0	1/1:3,14:17:15.04:400,15,0	1/1:8,15:24:36.12:856,36,0	1/1:9,23:33:87.26:2157,87,0	1/1:10,10:21:35.89:914,36,0	1/1:3,5:9:24.08:639,24,0
chr10	90981081	.	C	CT	5325.05	PASS	AB=0.950;AC=30;AF=0.536;AN=56;BaseQRankSum=13.394;DP=663;FS=19.947;HRun=1;HaplotypeScore=260.8288;InbreedingCoeff=-0.0197;MQ=54.57;MQ0=0;MQRankSum=-6.422;QD=9.99;ReadPosRankSum=8.590;VQSLOD=0.4960;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:70.51:0,71,963	0/0:12,0:12:36.12:0,36,504	0/0:23,0:20:46.70:0,47,686	0/0:16,0:12:30.10:0,30,411	0/1:21,3:24:16.06:16,0,57	1/1:24,0:24:53.11:595,53,0	1/1:9,0:9:5.87:91,6,0	0/1:39,2:39:99:318,0,411	1/1:30,0:30:8.80:375,9,0	0/1:29,1:31:45.77:328,0,46	0/1:24,1:25:29.42:201,0,29	0/1:16,2:18:24.65:261,0,25	0/1:26,1:27:99:239,0,123	1/1:18,3:21:22.42:235,22,0	0/0:27,0:27:81.27:0,81,1133	1/1:30,0:30:24.11:321,24,0	0/0:24,0:24:60.10:0,60,839	0/1:22,0:21:4.70:141,0,5	0/1:12,0:12:49.30:112,0,49	0/1:30,5:33:99:258,0,132	0/1:26,1:27:17.24:76,0,17	1/1:22,0:22:15.28:218,15,0	1/1:23,0:23:6.46:295,6,0	0/1:16,0:17:24.99:55,0,25	0/1:25,0:25:15.58:426,0,16	0/1:33,3:36:99:377,0,209	0/1:22,2:24:96.45:275,0,96	1/1:9,0:9:22.45:111,22,0
chr10	90981755	.	AG	A	8196.73	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=11.574;DP=749;FS=4.395;HRun=2;HaplotypeScore=151.6459;InbreedingCoeff=0.9989;MQ=81.39;MQ0=0;MQRankSum=-14.937;QD=32.14;ReadPosRankSum=-0.544;VQSLOD=4.1631;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,153,2173	0/0:12,0:12:36.07:0,36,495	0/0:25,0:25:72.18:0,72,965	0/0:27,0:27:75.17:0,75,1025	1/1:2,12:14:21.53:260,22,0	0/0:25,0:25:75.25:0,75,1109	0/0:22,0:22:63.21:0,63,944	1/1:2,24:26:72.23:934,72,0	1/1:3,28:31:72.18:916,72,0	0/0:38,0:38:99:0,114,1692	0/0:17,0:17:51.16:0,51,743	1/1:3,24:27:75.22:941,75,0	0/0:26,0:26:75.22:0,75,1079	1/1:3,20:23:66.20:840,66,0	0/0:36,0:36:99:0,108,1577	0/0:32,0:32:96.33:0,96,1435	0/0:41,0:41:99:0,114,1703	0/0:27,0:27:81.23:0,81,1156	1/1:2,30:32:96.30:1233,96,0	1/1:2,18:20:51.15:647,51,0	1/1:4,23:27:41.41:530,41,0	0/0:30,0:30:81.23:0,81,1147	0/0:25,0:25:69.21:0,69,991	0/0:37,0:37:99:0,102,1529	0/0:22,0:22:66.22:0,66,970	1/1:6,23:29:81.21:1003,81,0	1/1:1,18:19:48.16:621,48,0	1/1:0,7:7:21.07:271,21,0
chr10	90981770	.	C	CT	10188.87	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=12.774;DP=766;FS=0.585;HRun=1;HaplotypeScore=171.4191;InbreedingCoeff=0.9993;MQ=78.55;MQ0=0;MQRankSum=-14.203;QD=36.92;ReadPosRankSum=-3.760;VQSLOD=3.5648;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,162,1995	0/0:10,0:10:30.10:0,30,390	0/0:25,0:25:72.22:0,72,907	0/0:24,0:24:64.89:0,65,837	1/1:0,15:16:33.03:443,33,0	0/0:24,0:24:72.20:0,72,904	0/0:24,0:24:69.22:0,69,896	1/1:8,23:31:81.25:1164,81,0	1/1:2,33:35:96.21:1384,96,0	0/0:40,0:40:99:0,111,1392	0/0:16,0:16:45.08:0,45,563	1/1:3,25:28:78.25:1110,78,0	0/0:29,0:29:87.28:0,87,1129	1/1:3,23:26:72.13:988,72,0	0/0:33,0:33:99:0,99,1273	0/0:35,0:35:99:0,105,1335	0/0:36,0:36:99:0,102,1293	0/0:26,0:26:75.23:0,75,960	1/1:1,29:30:90.27:1307,90,0	1/1:4,23:27:66.18:955,66,0	1/1:8,18:26:45.35:523,45,0	0/0:27,0:27:78.25:0,78,1012	0/0:22,0:22:63.20:0,63,817	0/0:36,0:36:99:0,105,1333	0/0:28,0:28:84.21:0,84,1069	1/1:3,24:27:75.22:1075,75,0	1/1:1,22:23:63.04:926,63,0	1/1:0,7:7:21.07:314,21,0
chr10	90982040	.	T	TAATG	1598.98	PASS	AB=0.645;AC=7;AF=0.125;AN=56;BaseQRankSum=-7.404;DP=680;FS=4.370;HRun=0;HaplotypeScore=191.0257;InbreedingCoeff=0.5584;MQ=60.17;MQ0=1;MQRankSum=5.628;QD=18.17;ReadPosRankSum=-2.328;VQSLOD=3.0750;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,16:33:27.09:638,27,0	1/1:3,9:12:18.95:427,19,0	0/0:15,0:14:3:0,3,26	0/0:11,0:9:3:0,3,26	0/0:26,0:26:8.77:0,9,52	0/0:23,0:23:12.01:0,12,112	0/0:28,0:28:3:0,3,28	0/0:24,0:24:11.97:0,12,98	0/0:24,0:24:24.03:0,24,224	0/0:36,0:36:47.49:0,47,356	0/0:23,0:23:11.82:0,12,81	0/0:21,0:21:17.98:0,18,160	0/0:35,0:35:33.03:0,33,305	0/0:26,0:26:11.93:0,12,99	1/1:10,13:23:12.04:284,12,0	0/0:27,0:27:20.92:0,21,195	0/1:9,11:20:3.80:389,0,4	0/0:20,0:20:3:0,3,28	0/0:20,0:19:17.94:0,18,150	0/0:27,0:27:8.80:0,9,69	0/0:25,0:25:2.83:0,3,28	0/0:35,0:35:20.71:0,21,157	0/0:28,0:28:8.30:0,8,82	0/0:15,0:15:3:0,3,28	0/0:34,0:34:21.02:0,21,196	0/0:30,0:30:32.79:0,33,272	0/0:30,0:29:20.97:0,21,182	0/0:9,0:9:6.01:0,6,56
chr10	90982072	.	GAATGAATAAATA	G	19850.36	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=3.810;DP=686;FS=19.999;HRun=0;HaplotypeScore=196.6229;InbreedingCoeff=0.8981;MQ=57.81;MQ0=0;MQRankSum=-2.557;QD=34.52;ReadPosRankSum=2.606;VQSLOD=3.1414;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:81.17:0,81,2494	0/0:11,0:11:25.33:0,25,1105	0/0:11,0:10:27.04:0,27,416	0/0:12,0:9:24.01:0,24,344	1/1:0,28:28:59.91:928,60,0	1/1:1,18:19:15.05:521,15,0	1/1:0,24:24:15.05:397,15,0	1/1:1,25:26:75.15:1173,75,0	1/1:1,22:23:24.08:899,24,0	1/1:0,39:39:99:2548,108,0	1/1:1,18:19:47.90:832,48,0	1/1:0,19:19:24.08:782,24,0	1/1:3,26:29:35.99:1326,36,0	1/1:2,21:23:12.04:449,12,0	0/0:22,0:22:39.13:0,39,1637	1/1:0,27:27:24.02:859,24,0	0/0:19,0:19:36.11:0,36,1320	1/1:1,20:21:6.02:191,6,0	1/1:3,17:20:51.07:1016,51,0	1/1:0,31:31:72.08:1434,72,0	1/1:4,30:34:2.62:111,3,0	1/1:2,28:30:71.70:1231,72,0	1/1:0,29:29:29.43:815,29,0	1/1:0,18:18:9.03:180,9,0	1/1:0,39:39:36.12:1147,36,0	1/1:1,29:30:80.16:1667,80,0	1/1:1,26:27:37.49:1120,37,0	1/1:1,19:20:5.76:224,6,0
chr10	90986092	.	T	TA	1982.17	PASS	AB=0.792;AC=34;AF=0.680;AN=50;BaseQRankSum=11.070;DP=237;FS=3.477;HRun=1;HaplotypeScore=117.2945;InbreedingCoeff=0.4511;MQ=39.21;MQ0=12;MQRankSum=-10.355;QD=15.61;ReadPosRankSum=-3.101;VQSLOD=2.7531;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:99:0,105,1445	0/0:4,0:4:12.04:0,12,166	0/0:12,0:1:3.01:0,3,42	./.	1/1:2,0:2:2.84:14,3,0	1/1:3,3:6:12.09:122,12,0	1/1:2,0:2:2.80:13,3,0	1/1:8,5:10:0.45:133,0,0	1/1:5,8:12:26.82:330,27,0	1/1:4,4:8:18.02:166,18,0	1/1:2,1:3:5.49:52,5,0	1/1:4,4:8:19.35:217,19,0	0/1:3,2:4:29.87:82,0,30	1/1:3,2:5:11.35:111,11,0	0/0:19,0:19:57.19:0,57,797	0/1:6,3:9:0.44:138,0,0	0/0:25,0:25:66.19:0,66,898	0/1:5,2:6:19.58:112,0,20	1/1:10,2:11:28.04:206,28,0	0/1:1,0:1:0:0,0,0	0/1:1,1:2:0:0,0,0	./.	1/1:1,0:1:2.80:13,3,0	./.	1/1:8,1:9:25.75:161,26,0	1/1:2,1:3:8.79:71,9,0	1/1:5,2:7:16.61:121,17,0	0/1:9,2:11:0.76:74,0,1
chr10	90987301	.	T	TACACACACACAC	12923.02	PASS	AB=1.000;AC=43;AF=0.796;AN=54;BaseQRankSum=1.242;DP=733;FS=5.485;HRun=0;HaplotypeScore=276.0551;InbreedingCoeff=0.6334;MQ=56.92;MQ0=3;MQRankSum=-6.235;QD=23.16;ReadPosRankSum=-6.475;VQSLOD=2.2810;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:37:0.91:0,1,1127	0/0:18,0:18:27.60:0,28,847	./.	0/0:34,0:30:11.82:0,12,250	1/1:26,3:29:7.27:348,7,0	1/1:18,0:23:5.98:177,6,0	1/1:29,0:27:14.76:446,15,0	0/1:28,0:27:70.73:1012,0,71	1/1:24,0:24:17.24:632,17,0	1/1:36,0:34:33.58:1539,34,0	1/1:16,0:12:9.01:228,9,0	1/1:19,0:23:8.73:368,9,0	1/1:22,0:16:18.04:497,18,0	1/1:25,7:35:16.78:924,17,0	0/0:28,0:30:45.13:0,45,1438	1/1:22,0:25:3.01:156,3,0	0/0:28,0:31:28.33:0,28,1840	1/1:19,0:19:10.84:315,11,0	1/1:25,1:30:33.09:1220,33,0	1/1:14,2:17:12.04:641,12,0	1/1:32,0:31:20.91:453,21,0	1/1:20,0:22:6.02:306,6,0	1/1:22,0:20:7.74:173,8,0	1/1:27,0:26:9.08:191,9,0	1/1:27,0:27:6.02:193,6,0	1/1:35,0:35:56.53:1567,57,0	1/1:20,3:26:30.10:1347,30,0	1/1:3,0:3:6.02:191,6,0
chr10	90988013	.	CGT	C	567.76	PASS	AB=0.883;AC=14;AF=0.259;AN=54;BaseQRankSum=-2.488;DP=572;FS=18.684;HRun=0;HaplotypeScore=92.3421;InbreedingCoeff=-0.0888;MQ=66.12;MQ0=20;MQRankSum=1.926;QD=2.58;ReadPosRankSum=3.019;VQSLOD=0.6278;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:14.98:0,15,177	0/0:9,0:9:9.02:0,9,108	./.	0/0:23,0:18:0:0,0,0	0/0:21,0:21:12.03:0,12,151	1/1:20,2:19:2.16:70,2,0	0/1:21,3:20:17.87:18,0,20	0/0:34,0:34:17.57:0,18,109	0/0:21,0:21:7.22:0,7,189	0/1:17,3:20:63.18:124,0,63	0/1:15,5:19:48.96:128,0,49	0/0:21,0:21:11.61:0,12,111	0/1:8,4:12:33.93:78,0,34	0/0:17,0:17:20.43:0,20,205	0/0:13,0:25:3:0,3,27	0/1:20,2:19:38.62:51,0,39	0/0:15,0:22:11.77:0,12,87	0/1:15,0:15:19.73:29,0,20	0/0:20,0:18:7.33:0,7,66	0/0:14,0:14:9.02:0,9,107	0/0:43,0:41:20.79:0,21,191	0/1:13,4:16:21.54:46,0,22	1/1:14,1:14:4.12:38,4,0	0/1:24,5:25:44.15:78,0,44	0/1:14,1:13:46.92:47,0,49	0/0:19,0:18:18.29:0,18,153	0/0:14,0:14:9.85:0,10,86	0/1:9,0:9:5.33:5,0,96
chr10	90988052	.	G	GTA	3192.28	PASS	AB=0.897;AC=19;AF=0.339;AN=56;BaseQRankSum=0.481;DP=576;FS=1.911;HRun=0;HaplotypeScore=107.2418;InbreedingCoeff=0.6035;MQ=49.93;MQ0=28;MQRankSum=3.617;QD=12.05;ReadPosRankSum=3.365;VQSLOD=3.7295;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:35:59.83:0,60,547	0/0:8,0:8:15:0,15,153	0/0:6,0:4:8.97:0,9,72	0/0:6,0:4:11.99:0,12,115	0/0:16,0:16:26.97:0,27,249	0/1:26,3:25:18.37:243,0,18	0/1:19,1:16:8.30:167,0,8	0/0:21,0:20:45.92:0,46,314	0/0:21,0:21:37.19:0,37,322	1/1:22,2:22:44.92:523,45,0	1/1:20,1:21:8.71:380,9,0	0/0:22,0:22:20.12:0,20,182	0/1:15,0:14:21.32:218,0,21	0/0:19,0:19:38.20:0,38,318	0/0:26,0:26:22.59:0,23,193	1/1:26,2:25:55.22:525,55,0	0/0:27,0:27:34.23:0,34,237	0/1:6,9:14:37.23:68,0,37	0/0:10,0:8:15.44:0,15,109	0/0:17,0:14:32.95:0,33,282	0/0:40,0:37:58.88:0,59,472	1/1:17,2:18:29.84:325,30,0	1/1:25,1:24:10.78:237,11,0	1/1:33,5:34:36.70:364,37,0	1/1:18,3:19:17.03:337,17,0	0/0:14,0:14:37.69:0,38,251	0/0:20,0:20:36.32:0,36,269	0/1:9,0:8:2.49:2,0,113
chr10	90988058	.	GTATGTA	G	2558.92	PASS	AB=0.972;AC=13;AF=0.232;AN=56;BaseQRankSum=-6.142;DP=558;FS=2.071;HRun=0;HaplotypeScore=139.7031;InbreedingCoeff=0.0634;MQ=49.88;MQ0=27;MQRankSum=2.280;QD=12.92;ReadPosRankSum=-5.679;VQSLOD=0.8777;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:35:59.77:0,60,874	0/0:9,0:9:14.88:0,15,243	0/0:9,0:6:14.72:0,15,192	0/0:7,0:6:17.41:0,17,204	0/1:17,0:18:99:311,0,126	0/0:25,0:21:27.17:0,27,522	0/0:19,0:15:27.82:0,28,447	1/1:9,13:21:41.22:539,41,0	0/1:19,0:19:86.66:236,0,87	0/0:26,0:24:39.82:0,40,1082	0/0:21,0:21:27.61:0,28,855	1/1:21,0:21:9.62:203,10,0	0/0:15,0:14:20.67:0,21,438	0/1:17,0:17:70.55:145,0,71	0/0:23,0:23:24.55:0,25,530	0/0:27,0:24:61.17:0,61,1250	0/0:27,0:27:31.39:0,31,619	0/0:16,0:15:7.91:0,8,293	0/1:8,0:7:29.27:102,0,29	0/1:17,0:14:83.46:261,0,83	0/1:32,0:29:42.28:339,0,42	0/0:18,0:17:20.50:0,21,526	0/0:24,0:22:14.01:0,14,544	0/0:36,0:33:27.09:0,27,606	0/0:20,0:18:8.77:0,9,573	0/1:14,0:14:99:275,0,100	0/1:20,0:20:90.32:282,0,90	0/1:8,0:8:27.97:28,0,67
chr10	90988142	.	G	GA	9265.87	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-12.573;DP=573;FS=5.377;HRun=2;HaplotypeScore=62.3335;InbreedingCoeff=0.9991;MQ=84.62;MQ0=1;MQRankSum=-1.292;QD=39.10;ReadPosRankSum=-0.148;VQSLOD=5.1508;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.30:0,96,1190	0/0:9,0:8:21.07:0,21,260	0/0:18,0:18:54.16:0,54,661	0/0:18,0:18:51.13:0,51,617	0/0:29,0:29:84.25:0,84,1029	1/1:0,25:25:72.24:1037,72,0	1/1:0,19:19:51.17:734,51,0	0/0:28,0:28:81.24:0,81,984	0/0:17,0:17:45.14:0,45,557	1/1:1,28:29:84.23:1169,84,0	1/1:1,23:24:63.21:907,63,0	0/0:17,0:17:51.16:0,51,632	1/1:0,10:10:27.09:389,27,0	0/0:14,0:14:39.12:0,39,483	0/0:25,0:25:72.23:0,72,892	1/1:0,23:23:69.23:994,69,0	0/0:12,0:12:33.10:0,33,409	1/1:0,15:15:45.15:648,45,0	0/0:12,0:11:30.09:0,30,372	0/0:25,0:25:72.21:0,72,880	0/0:19,0:19:48.15:0,48,595	1/1:0,31:31:84.24:1186,84,0	1/1:1,21:22:54.18:777,54,0	1/1:3,20:23:57.19:820,57,0	1/1:0,16:16:42.14:605,42,0	0/0:20,0:20:54.17:0,54,670	0/0:19,0:19:57.18:0,57,705	0/0:20,0:20:60.19:0,60,744
chr10	90988532	.	CG	C	2699.83	PASS	AB=1.000;AC=23;AF=0.442;AN=52;BaseQRankSum=-0.626;DP=367;FS=7.411;HRun=2;HaplotypeScore=46.4932;InbreedingCoeff=0.8728;MQ=41.20;MQ0=51;MQRankSum=-3.695;QD=18.88;ReadPosRankSum=0.654;VQSLOD=3.1357;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:22:47.40:0,47,577	0/0:8,0:6:14.97:0,15,179	./.	./.	0/0:17,0:14:30.03:0,30,346	1/1:2,5:6:12.04:153,12,0	1/1:4,13:13:33.11:419,33,0	0/0:10,0:11:14.23:0,14,349	0/0:12,0:10:27.08:0,27,380	1/1:1,14:14:39.08:449,39,0	1/1:1,7:7:18.02:211,18,0	0/0:12,0:9:17.51:0,18,269	1/1:1,5:5:6.02:77,6,0	0/0:6,0:6:5.67:0,6,89	0/0:16,0:15:45.12:0,45,611	1/1:2,8:9:11.94:116,12,0	0/0:35,0:26:63.08:0,63,824	1/1:9,11:14:26.99:309,27,0	0/0:19,0:18:29.48:0,29,543	0/0:17,0:15:39:0,39,454	0/1:6,0:5:5.29:5,0,159	1/1:3,14:15:36.02:411,36,0	1/1:1,19:19:33.06:422,33,0	1/1:2,5:5:6.02:76,6,0	1/1:5,5:9:21.06:258,21,0	0/0:13,0:10:24.07:0,24,340	0/0:16,0:15:42.11:0,42,563	0/0:15,0:15:33.08:0,33,444
chr10	90989436	.	AGTGT	A	5804.57	PASS	AB=0.764;AC=22;AF=0.393;AN=56;BaseQRankSum=-1.783;DP=648;FS=4.500;HRun=0;HaplotypeScore=120.0051;InbreedingCoeff=0.8225;MQ=57.19;MQ0=15;MQRankSum=1.954;QD=23.99;ReadPosRankSum=1.780;VQSLOD=4.5023;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:66.23:0,66,1587	0/0:8,0:8:6.02:0,6,142	0/0:43,0:6:8.76:0,9,124	0/0:36,0:18:21.07:0,21,453	0/0:9,0:23:36.12:0,36,637	1/1:11,14:25:30.10:495,30,0	1/1:7,14:26:44.93:633,45,0	0/0:22,0:36:60.71:0,61,1021	0/0:7,0:20:41.93:0,42,745	1/1:11,12:23:33.07:502,33,0	1/1:8,14:23:45.15:721,45,0	0/0:18,0:27:38.56:0,39,661	1/1:4,7:11:18.06:297,18,0	0/0:7,0:18:21.27:0,21,388	0/0:21,0:24:38.85:0,39,812	0/1:4,14:19:16.59:509,0,17	0/0:20,0:22:47.58:0,48,859	1/1:11,23:34:38.96:941,39,0	0/0:11,0:18:30.10:0,30,520	0/0:13,0:14:18.06:0,18,315	0/0:18,0:44:60.21:0,60,1089	1/1:3,5:8:15.05:248,15,0	1/1:4,9:13:25.33:399,25,0	1/1:4,15:20:32.85:507,33,0	1/1:3,14:18:30.10:495,30,0	0/1:9,1:20:57.21:57,0,476	0/0:8,0:14:27.09:0,27,476	0/0:6,0:19:30.10:0,30,561
chr10	90991604	.	C	CT	2418.72	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=0.920;DP=469;FS=18.793;HRun=3;HaplotypeScore=75.2587;InbreedingCoeff=0.8822;MQ=70.74;MQ0=0;MQRankSum=-1.315;QD=11.68;ReadPosRankSum=0.196;VQSLOD=0.7820;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:66.24:0,66,634	0/0:8,0:8:21.03:0,21,221	0/1:16,0:9:3.17:3,0,54	0/0:13,0:9:0.75:0,1,9	0/0:19,0:19:31.28:0,31,300	1/1:18,2:20:45.67:255,46,0	1/1:17,1:18:43.49:324,43,0	0/0:21,0:21:42.58:0,43,283	0/0:11,0:11:5.12:0,5,82	1/1:20,0:19:31.72:211,32,0	1/1:17,1:18:38.08:233,38,0	0/0:12,0:12:20.93:0,21,152	1/1:10,1:11:24.32:204,24,0	0/0:16,0:16:22.54:0,23,152	0/0:14,0:14:39.45:0,39,381	1/1:10,2:12:29.89:230,30,0	0/0:19,0:19:42.01:0,42,425	1/1:20,0:20:37.93:235,38,0	0/0:18,0:18:9.32:0,9,67	0/0:13,0:13:18.92:0,19,134	0/0:4,0:3:9:0,9,77	1/1:17,2:19:39.99:224,40,0	1/1:15,0:15:37.33:233,37,0	1/1:18,2:20:44.57:242,45,0	1/1:15,2:17:30.67:241,31,0	0/0:20,0:20:20.59:0,21,225	0/0:22,0:22:20.93:0,21,137	0/0:22,0:22:31.02:0,31,203
chr10	90991607	.	T	TAA	2274.84	PASS	AB=0.770;AC=21;AF=0.375;AN=56;BaseQRankSum=-4.788;DP=486;FS=9.148;HRun=16;HaplotypeScore=88.4398;InbreedingCoeff=0.6686;MQ=69.06;MQ0=2;MQRankSum=0.018;QD=10.11;ReadPosRankSum=-3.577;VQSLOD=0.7217;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:32:2.42:2,0,275	0/0:9,0:9:14.79:0,15,110	0/0:20,0:9:2.56:0,3,20	0/0:12,0:9:2.32:0,2,13	0/1:11,1:18:19.42:130,0,19	0/0:20,0:20:45.28:0,45,328	0/0:17,0:17:15.35:0,15,121	1/1:8,9:20:34.79:352,35,0	0/1:5,8:13:23.89:140,0,24	0/0:19,0:18:41.69:0,42,312	0/0:19,0:19:41.20:0,41,267	1/1:7,8:16:11.25:117,11,0	0/0:9,0:9:6.43:0,6,46	1/1:8,10:18:14.75:160,15,0	0/0:11,0:15:19.91:0,20,160	0/0:11,0:12:10.41:0,10,133	0/0:17,0:19:34.26:0,34,256	0/0:16,0:16:26.67:0,27,180	1/1:5,12:19:44.32:441,44,0	1/1:5,7:15:6.26:220,6,0	1/1:6,0:5:2.98:22,3,0	0/0:19,0:19:33.71:0,34,317	0/0:13,0:15:26.08:0,26,179	0/0:19,0:22:53.84:0,54,357	0/0:15,0:16:23.16:0,23,148	1/1:10,11:23:37.64:321,38,0	1/1:4,11:22:31.66:293,32,0	1/1:8,5:22:13.06:273,13,0
chr10	90992444	.	C	CTCTT	6423.12	PASS	AB=0.963;AC=44;AF=0.815;AN=54;BaseQRankSum=9.354;DP=597;FS=8.545;HRun=0;HaplotypeScore=134.6809;InbreedingCoeff=0.7238;MQ=53.00;MQ0=11;MQRankSum=-4.467;QD=13.75;ReadPosRankSum=-4.011;VQSLOD=3.1346;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:50:95.43:0,95,1148	0/0:13,0:13:27.08:0,27,377	./.	0/1:11,0:5:0:0,0,0	1/1:6,16:23:15.58:301,16,0	1/1:19,0:19:26.86:258,27,0	1/1:20,0:17:19.71:168,20,0	1/1:45,0:40:68.23:495,68,0	1/1:8,8:16:9.02:181,9,0	1/1:20,0:18:19.66:148,20,0	1/1:11,0:8:6.06:33,6,0	1/1:4,14:19:3.01:73,3,0	1/1:12,0:11:19.62:142,20,0	1/1:16,0:16:39:491,39,0	0/0:22,0:22:51.06:0,51,622	1/1:25,0:20:26.91:317,27,0	0/0:34,0:32:48.11:0,48,646	1/1:8,0:7:10.98:108,11,0	0/1:23,2:24:13.95:353,0,14	1/1:4,21:25:44.79:495,45,0	1/1:32,0:30:28.85:588,29,0	1/1:18,0:17:32.14:222,32,0	1/1:14,0:13:20.16:139,20,0	1/1:13,0:13:21.34:190,21,0	1/1:24,0:23:34.81:285,35,0	1/1:32,0:32:69.03:905,69,0	1/1:17,0:21:39.44:459,39,0	1/1:10,8:17:3.01:73,3,0
chr10	90992490	.	CTTTCTTT	C	3160.07	PASS	AB=0.967;AC=14;AF=0.250;AN=56;BaseQRankSum=8.241;DP=524;FS=5.270;HRun=0;HaplotypeScore=159.3479;InbreedingCoeff=-0.0008;MQ=50.06;MQ0=7;MQRankSum=-3.079;QD=16.63;ReadPosRankSum=3.185;VQSLOD=2.8314;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,3655	0/0:10,0:10:30.10:0,30,950	0/0:16,0:8:20.96:0,21,490	0/1:11,0:4:6.78:7,0,299	0/0:22,0:22:54.18:0,54,1279	0/1:14,1:15:30.70:431,0,31	0/1:14,2:14:52.35:188,0,52	0/0:30,0:30:74.59:0,75,979	0/0:15,0:15:33.11:0,33,717	0/1:21,0:18:71.30:500,0,71	1/1:15,1:13:14.60:313,15,0	0/0:18,0:18:18.06:0,18,469	1/1:14,4:17:1.82:544,2,0	0/0:17,0:17:50.18:0,50,1017	0/0:24,0:24:72.25:0,72,2325	0/1:20,3:18:99:365,0,190	0/0:26,0:25:72.23:0,72,2469	0/1:11,0:10:41.69:42,0,103	0/0:17,0:15:42.14:0,42,1117	0/0:31,0:31:81.22:0,81,1964	0/0:21,0:19:50.59:0,51,1080	0/1:15,0:14:51.34:246,0,51	0/1:9,0:8:14.63:121,0,15	0/1:13,0:13:15.09:199,0,15	0/1:21,0:20:66.90:365,0,67	0/0:25,0:25:28.78:0,29,1366	0/0:15,0:15:35.96:0,36,537	0/0:9,0:8:12.04:0,12,351
chr10	90992777	.	TCTCA	T	1873.42	PASS	AB=0.989;AC=36;AF=0.667;AN=54;BaseQRankSum=5.069;DP=502;FS=11.515;HRun=0;HaplotypeScore=186.7213;InbreedingCoeff=0.1460;MQ=56.46;MQ0=16;MQRankSum=-2.390;QD=4.87;ReadPosRankSum=0.628;VQSLOD=1.7861;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:26:2.71:23,3,0	0/0:6,0:5:9.43:0,9,110	0/0:48,0:15:4.67:0,5,53	0/1:68,0:16:23.01:23,0,39	1/1:12,2:14:2.94:18,3,0	0/1:20,0:20:9.24:36,0,9	1/1:21,0:21:12.37:87,12,0	1/1:17,0:17:14.04:90,14,0	1/1:17,1:18:8.74:78,9,0	0/1:18,0:18:79.97:143,0,80	./.	1/1:9,4:13:14.91:153,15,0	0/1:19,0:18:16.67:159,0,17	1/1:9,2:11:9.03:117,9,0	0/0:23,0:21:8.46:0,8,62	1/1:25,0:25:11.53:191,12,0	0/1:12,0:12:24.71:25,0,47	0/1:13,0:13:88.09:104,0,88	1/1:9,1:10:20.91:171,21,0	1/1:7,2:8:6.02:82,6,0	1/1:13,1:13:2.69:18,3,0	1/1:9,0:9:3.01:35,3,0	0/1:7,0:7:0:0,0,0	0/0:23,0:22:3.32:0,3,20	0/0:12,0:12:2.35:0,2,18	0/1:19,2:21:65.75:159,0,66	1/1:12,2:14:21.67:224,22,0	1/1:2,2:4:8.99:95,9,0
chr10	90992779	.	TCA	T	1771.03	PASS	AB=0.954;AC=44;AF=0.846;AN=52;BaseQRankSum=3.157;DP=454;FS=2.144;HRun=0;HaplotypeScore=169.3622;InbreedingCoeff=-0.0489;MQ=59.13;MQ0=15;MQRankSum=0.049;QD=4.22;ReadPosRankSum=0.807;VQSLOD=3.1930;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:2.55:23,3,0	0/1:5,0:4:9.14:9,0,37	0/1:48,0:15:6.76:7,0,28	0/1:68,0:16:15.63:16,0,50	1/1:7,0:7:2.68:18,3,0	1/1:19,0:19:6.72:47,7,0	1/1:19,2:21:12.38:91,12,0	1/1:9,0:9:17.01:99,17,0	1/1:18,0:18:12.36:103,12,0	1/1:17,1:18:0.94:162,1,0	./.	1/1:10,0:10:14.66:88,15,0	1/1:16,3:18:11.58:160,12,0	1/1:7,0:7:8.91:76,9,0	0/0:23,0:21:2.07:0,2,12	1/1:18,6:24:30.04:242,30,0	0/1:12,0:12:6.13:49,0,6	0/1:9,3:12:16.29:94,0,16	1/1:9,0:9:20.70:139,21,0	1/1:6,0:5:5.85:35,6,0	1/1:13,0:12:2.94:18,3,0	1/1:9,0:9:2.98:21,3,0	./.	1/1:20,2:21:1.89:23,2,0	1/1:12,0:12:4.75:49,5,0	0/1:11,1:12:9.31:110,0,9	1/1:10,2:12:25.20:163,25,0	1/1:3,0:3:8.79:54,9,0
chr10	90992780	.	CACTCTCTCGATATA	C	6831.30	PASS	AB=0.962;AC=39;AF=0.750;AN=52;BaseQRankSum=2.742;DP=438;FS=1.513;HRun=0;HaplotypeScore=187.6573;InbreedingCoeff=0.0969;MQ=59.50;MQ0=14;MQRankSum=-3.718;QD=20.39;ReadPosRankSum=1.798;VQSLOD=3.7653;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:3.10:23,3,0	0/1:5,0:4:6.95:7,0,249	0/0:47,0:15:23.92:0,24,313	0/1:69,0:17:68.89:69,0,278	1/1:7,0:7:2.67:88,3,0	0/1:18,0:18:4.48:176,0,4	1/1:20,0:20:14.63:285,15,0	1/1:7,0:7:18.03:469,18,0	1/1:17,0:17:17.99:319,18,0	0/1:17,0:17:87.05:565,0,87	./.	1/1:10,0:10:15.05:493,15,0	1/1:17,1:17:10.47:598,10,0	1/1:7,0:7:11.97:310,12,0	0/0:22,0:20:8.73:0,9,87	1/1:24,0:24:25.62:313,26,0	0/1:11,0:11:56.38:56,0,99	0/1:7,4:11:99:171,0,101	1/1:7,0:7:21.07:625,21,0	1/1:6,0:5:5.53:211,6,0	1/1:11,0:11:3.01:88,3,0	1/1:1,8:9:3.01:132,3,0	./.	0/0:22,0:21:0.22:0,0,0	1/1:11,0:11:3.11:27,3,0	0/1:12,0:12:62.92:734,0,63	1/1:10,0:10:26.79:767,27,0	1/1:3,0:3:9.03:304,9,0
chr10	90992784	.	CTCTCGATATA	C	5715.63	PASS	AB=0.993;AC=44;AF=0.846;AN=52;BaseQRankSum=0.785;DP=424;FS=9.139;HRun=0;HaplotypeScore=177.8591;InbreedingCoeff=0.2315;MQ=64.74;MQ0=14;MQRankSum=-3.216;QD=14.01;ReadPosRankSum=2.235;VQSLOD=3.3717;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,1:21:0.37:1,0,0	0/0:5,0:4:9.03:0,9,166	0/1:49,0:16:23.91:24,0,278	0/1:67,0:18:99:165,0,243	1/1:7,0:7:2.77:70,3,0	1/1:17,0:17:6.02:125,6,0	1/1:18,0:18:12.04:236,12,0	1/1:7,0:7:15:341,15,0	1/1:14,0:14:10.28:180,10,0	1/1:17,0:17:34.30:632,34,0	./.	1/1:10,0:10:15.05:355,15,0	1/1:15,3:17:16.81:522,17,0	1/1:7,0:7:11.97:209,12,0	1/1:22,0:20:3.54:11,4,0	1/1:22,0:22:20.94:393,21,0	0/1:10,0:10:23.04:68,0,23	1/1:11,0:11:18.01:299,18,0	1/1:7,0:7:20.66:451,21,0	1/1:6,0:5:5.78:143,6,0	1/1:10,0:10:3.01:70,3,0	1/1:8,0:9:3.01:76,3,0	./.	0/1:22,0:21:0:0,0,0	0/1:11,0:11:0:0,0,0	1/1:12,0:12:27.08:588,27,0	1/1:10,0:10:23.97:540,24,0	1/1:3,0:3:9.03:216,9,0
chr10	90992788	.	CGATATA	C	5612.83	PASS	AB=0.742;AC=45;AF=0.865;AN=52;BaseQRankSum=0.658;DP=356;FS=7.198;HRun=0;HaplotypeScore=148.5159;InbreedingCoeff=0.2119;MQ=69.46;MQ0=8;MQRankSum=-2.480;QD=16.32;ReadPosRankSum=2.936;VQSLOD=3.6828;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,2:14:0.37:0,0,1	0/0:4,0:3:3.02:0,3,24	0/1:47,1:16:73.76:74,0,188	0/1:60,3:18:99:241,0,261	1/1:2,4:7:3.01:70,3,0	1/1:0,13:14:6.02:125,6,0	1/1:0,13:13:12.04:271,12,0	1/1:0,5:7:0.06:323,0,0	1/1:2,9:13:9.03:168,9,0	1/1:0,15:15:36.11:742,36,0	./.	1/1:4,6:10:15.05:276,15,0	1/1:5,6:13:26.86:472,27,0	1/1:3,4:7:11.96:130,12,0	1/1:11,8:17:6.01:121,6,0	1/1:1,15:16:20.90:451,21,0	1/1:4,0:6:8.99:158,9,0	1/1:7,2:9:18.01:276,18,0	1/1:2,4:7:12.52:381,13,0	1/1:2,3:5:6.02:90,6,0	1/1:1,8:10:3.01:70,3,0	1/1:8,0:9:3.01:51,3,0	./.	0/1:1,9:10:0:0,0,0	0/1:0,4:4:0:0,0,0	1/1:3,6:10:27.08:530,27,0	1/1:4,6:11:24.07:430,24,0	1/1:2,1:3:9.03:163,9,0
chr10	90992789	.	GATATATCTCTGCGGCA	G	7137.81	PASS	AB=0.997;AC=43;AF=0.827;AN=52;BaseQRankSum=-0.517;DP=354;FS=0.892;HRun=0;HaplotypeScore=170.8788;InbreedingCoeff=0.1327;MQ=69.57;MQ0=8;MQRankSum=-2.688;QD=21.12;ReadPosRankSum=1.518;VQSLOD=3.8062;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:14:9.23:61,9,0	0/0:4,0:3:9.03:0,9,291	0/1:48,0:16:42.89:43,0,288	0/1:62,0:18:99:182,0,235	1/1:5,2:7:2.97:83,3,0	1/1:14,0:14:6.02:170,6,0	1/1:13,0:13:9.50:252,10,0	1/1:7,0:7:18.05:445,18,0	1/1:11,1:12:16.52:323,17,0	1/1:15,0:15:0.64:556,1,0	./.	1/1:6,4:10:15.05:553,15,0	1/1:12,0:12:24.04:577,24,0	1/1:4,3:7:14.97:411,15,0	0/1:19,0:17:10.06:13,0,10	1/1:16,0:16:12.82:183,13,0	0/1:6,0:6:69.26:72,0,69	1/1:9,0:9:5.03:120,5,0	1/1:5,2:7:21.05:649,21,0	1/1:3,2:5:5.94:262,6,0	1/1:9,1:10:3.01:81,3,0	1/1:9,0:9:3.01:91,3,0	./.	0/1:10,0:10:0:0,0,1	0/0:4,0:4:0:0,0,0	1/1:7,3:10:24.06:817,24,0	1/1:7,4:11:24.08:847,24,0	1/1:1,2:3:9.03:346,9,0
chr10	90993513	.	TCAAAC	T	10552.92	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=12.287;DP=635;FS=9.022;HRun=0;HaplotypeScore=126.2604;InbreedingCoeff=0.9502;MQ=59.97;MQ0=6;MQRankSum=-1.961;QD=23.19;ReadPosRankSum=4.237;VQSLOD=3.9432;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,126,3059	0/0:6,0:6:15.05:0,15,287	0/0:30,0:19:26.08:0,26,426	0/0:33,0:22:12.13:0,12,242	1/1:5,13:18:30.03:437,30,0	1/1:3,11:14:15.05:281,15,0	1/1:15,18:33:14.78:240,15,0	1/1:12,10:21:27.06:373,27,0	1/1:2,12:14:24.08:450,24,0	1/1:9,21:30:63.14:987,63,0	1/1:5,7:12:21.07:312,21,0	1/1:5,23:28:48.03:824,48,0	1/1:9,19:28:35.93:675,36,0	1/1:1,21:22:29.89:563,30,0	0/0:22,0:22:54.17:0,54,1323	1/1:9,17:26:32.24:596,32,0	0/0:37,0:37:87.29:0,87,2195	1/1:7,12:19:8.96:109,9,0	1/1:9,17:25:51.12:871,51,0	1/1:5,16:21:41.59:620,42,0	1/1:8,19:27:14.18:526,14,0	1/1:4,12:16:38.89:505,39,0	1/1:4,7:11:20.99:335,21,0	1/1:15,17:32:15.04:235,15,0	1/1:3,11:14:20.93:279,21,0	1/1:6,13:19:36.08:616,36,0	1/1:9,10:19:29.72:551,30,0	1/1:0,4:4:9.03:169,9,0
chr10	90993669	.	G	GA	8123.44	PASS	AB=0.645;AC=41;AF=0.732;AN=56;BaseQRankSum=-2.034;DP=561;FS=2.559;HRun=10;HaplotypeScore=80.8152;InbreedingCoeff=0.6935;MQ=66.62;MQ0=1;MQRankSum=0.225;QD=19.30;ReadPosRankSum=-1.317;VQSLOD=5.1324;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:44:99:0,116,934	0/0:7,0:7:20.98:0,21,172	0/0:15,0:15:4.04:0,4,133	0/0:20,0:15:10.99:0,11,119	1/1:3,14:17:12.65:305,13,0	1/1:8,14:25:30.34:422,30,0	0/1:8,9:19:8.81:132,0,9	1/1:6,22:29:63.14:663,63,0	1/1:3,17:20:48.12:512,48,0	1/1:7,14:22:22.10:399,22,0	1/1:2,8:11:20.81:181,21,0	1/1:3,19:22:45.11:480,45,0	1/1:2,14:16:27.06:285,27,0	1/1:0,14:15:38.93:398,39,0	0/0:22,0:22:59.90:0,60,492	1/1:12,10:23:5.74:338,6,0	0/0:27,0:31:77.91:0,78,589	1/1:5,13:19:33.39:331,33,0	1/1:4,25:29:78.15:807,78,0	1/1:1,16:17:36.06:373,36,0	1/1:1,6:8:18.04:185,18,0	0/1:5,8:14:7.46:138,0,7	1/1:6,11:17:20.39:215,20,0	1/1:6,10:16:21.52:222,22,0	1/1:8,14:24:36.47:468,36,0	1/1:4,23:29:47.20:645,47,0	1/1:3,17:20:48.12:512,48,0	0/1:5,4:9:9.41:113,0,9
chr10	90994001	.	C	CGG	673.07	PASS	AC=16;AF=0.308;AN=52;BaseQRankSum=4.607;DP=184;FS=2.536;HRun=1;HaplotypeScore=36.8692;InbreedingCoeff=0.6511;MQ=32.98;MQ0=29;MQRankSum=-0.521;QD=16.42;ReadPosRankSum=2.405;VQSLOD=1.2245;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:7:15.05:0,15,206	0/0:3,0:3:6.02:0,6,83	0/0:11,0:1:2.98:0,3,22	0/0:18,0:4:6.20:0,6,28	0/0:8,0:7:15.03:0,15,175	1/1:2,1:2:6.01:71,6,0	1/1:3,2:4:6.01:67,6,0	0/0:10,0:9:27.07:0,27,360	0/0:4,0:4:6.02:0,6,81	1/1:4,4:7:15.05:232,15,0	1/1:5,2:6:12:132,12,0	0/0:7,0:7:14.08:0,14,176	./.	0/0:2,0:1:3:0,3,29	0/0:3,0:1:3.01:0,3,41	1/1:3,0:1:3.01:42,3,0	0/0:17,0:13:24.08:0,24,330	0/0:5,0:4:6.02:0,6,74	0/0:9,0:8:17.89:0,18,201	0/0:6,0:5:5.23:0,5,53	0/0:5,0:3:6.02:0,6,81	1/1:2,5:7:3.01:48,3,0	1/1:3,1:4:12:146,12,0	./.	1/1:1,3:4:6.02:101,6,0	0/0:6,0:6:17.79:0,18,205	0/0:8,0:5:9.03:0,9,118	0/0:7,0:4:8.39:0,8,99
chr10	90994011	.	A	AGAACC	526.02	PASS	AB=0.797;AC=10;AF=0.185;AN=54;BaseQRankSum=2.482;DP=287;FS=2.158;HRun=0;HaplotypeScore=60.5981;InbreedingCoeff=0.2626;MQ=30.52;MQ0=42;MQRankSum=-1.365;QD=13.84;ReadPosRankSum=2.806;VQSLOD=2.5838;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:10:18.06:0,18,323	0/0:4,0:4:12.04:0,12,263	0/0:39,0:1:3.01:0,3,39	0/0:43,0:7:17.84:0,18,168	0/0:17,0:16:39.08:0,39,626	0/1:2,1:2:33.55:70,0,34	0/1:3,2:4:10.03:21,0,10	0/0:21,0:20:49.03:0,49,851	0/0:5,0:4:12.04:0,12,247	1/1:4,3:6:15.05:320,15,0	0/1:7,1:7:61.18:61,0,118	0/0:7,0:7:15.05:0,15,297	0/0:1,0:1:2.98:0,3,21	0/0:5,0:4:6.02:0,6,100	0/0:5,0:3:6.02:0,6,128	0/0:5,0:2:2.88:0,3,15	0/0:21,0:17:38.93:0,39,657	0/0:4,0:3:5.84:0,6,35	0/0:10,0:10:21.04:0,21,361	0/0:7,0:6:9.03:0,9,147	0/0:8,0:6:14.41:0,14,260	1/1:4,3:7:3.01:54,3,0	0/1:4,0:5:63.95:64,0,74	./.	1/1:0,3:3:3.01:76,3,0	0/0:12,0:11:33.04:0,33,548	0/0:8,0:6:14.94:0,15,247	0/0:12,0:8:9.03:0,9,181
chr10	90994025	.	AG	A	322.76	PASS	AB=0.964;AC=14;AF=0.250;AN=56;BaseQRankSum=-2.665;DP=324;FS=2.251;HRun=1;HaplotypeScore=44.8238;InbreedingCoeff=-0.1240;MQ=43.10;MQ0=41;MQRankSum=-3.540;QD=2.48;ReadPosRankSum=2.862;VQSLOD=-0.5780;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:10:9.38:40,0,9	0/0:6,0:6:14.21:0,14,81	0/0:58,1:5:5.49:0,5,47	0/0:55,1:12:1.46:0,1,50	0/1:17,1:18:37.39:110,0,37	0/0:4,0:2:5.42:0,5,26	0/0:6,0:5:7.91:0,8,42	0/1:24,1:24:99:124,0,182	1/1:4,0:3:5.75:22,6,0	0/0:7,0:5:11.88:0,12,81	0/0:6,0:5:10.16:0,10,50	0/0:8,1:9:4.28:0,4,72	0/0:5,0:5:11.11:0,11,70	1/1:4,0:4:4.50:22,4,0	0/1:6,0:4:9.24:9,0,26	0/0:5,0:2:2.94:0,3,18	0/1:15,0:14:42.24:42,0,66	0/0:3,0:3:2.94:0,3,18	0/1:9,1:10:8.24:8,0,49	0/1:6,0:5:13.49:13,0,18	0/0:6,0:4:5.81:0,6,39	0/0:2,0:2:2.94:0,3,18	0/1:7,0:7:3.33:3,0,22	0/0:3,0:1:2.94:0,3,18	0/0:4,0:3:8.81:0,9,53	0/1:15,0:14:25.23:25,0,86	0/1:7,2:7:46.34:46,0,48	0/0:13,0:11:8.49:0,8,73
chr10	90994031	.	AAAGG	A	690.05	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=5.137;DP=337;FS=5.931;HRun=0;HaplotypeScore=58.1963;InbreedingCoeff=0.7868;MQ=48.81;MQ0=35;MQRankSum=-4.777;QD=14.68;ReadPosRankSum=1.120;VQSLOD=2.0714;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:11:23.57:0,24,384	0/0:7,0:7:21.07:0,21,474	0/0:62,0:7:13.20:0,13,188	0/0:57,0:13:12.84:0,13,283	0/0:22,0:22:59.37:0,59,649	1/1:4,0:2:6.01:56,6,0	1/1:5,0:5:12.01:111,12,0	0/0:27,0:26:57.77:0,58,733	0/0:4,0:3:7.75:0,8,69	1/1:6,1:5:11.99:113,12,0	1/1:5,1:5:11.76:125,12,0	0/0:9,0:9:20.39:0,20,219	1/1:5,0:5:11.97:114,12,0	0/0:5,0:5:8.66:0,9,67	0/0:8,0:7:8.11:0,8,333	1/1:3,0:2:3:28,3,0	0/0:14,0:14:17.68:0,18,522	1/1:2,1:3:3:27,3,0	0/0:11,0:11:11.38:0,11,223	0/0:8,0:7:17.73:0,18,247	0/0:7,0:5:5.96:0,6,44	1/1:2,0:2:3:28,3,0	1/1:5,1:6:11.96:131,12,0	1/1:2,0:1:3:28,3,0	1/1:3,1:3:9.02:125,9,0	0/0:16,0:15:41.24:0,41,468	0/0:9,0:7:16.53:0,17,161	0/0:12,0:11:21.07:0,21,328
chr10	90994032	.	AAGG	A	1131.04	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=2.841;DP=338;FS=8.900;HRun=0;HaplotypeScore=53.4507;InbreedingCoeff=0.7725;MQ=49.05;MQ0=34;MQRankSum=-5.416;QD=24.59;ReadPosRankSum=1.437;VQSLOD=2.5113;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:11:23.56:0,24,313	0/0:7,0:7:21.07:0,21,394	0/0:62,0:7:13.98:0,14,187	0/0:57,0:13:24.39:0,24,268	0/0:21,0:22:56.86:0,57,502	1/1:4,0:2:6.02:105,6,0	1/1:2,3:5:12.04:211,12,0	0/0:29,0:28:60.03:0,60,662	0/0:4,0:3:7.67:0,8,53	1/1:4,3:5:12.04:177,12,0	1/1:4,1:5:12.03:170,12,0	0/0:9,0:9:20.32:0,20,179	1/1:5,0:5:12.01:166,12,0	0/0:5,0:5:8.30:0,8,50	0/0:8,0:7:7.84:0,8,274	1/1:2,1:2:3.01:53,3,0	0/0:14,0:14:6.04:0,6,440	1/1:3,0:3:3.01:53,3,0	0/0:12,0:12:12.55:0,13,198	0/0:8,0:7:17.71:0,18,193	0/0:6,0:4:5.98:0,6,56	1/1:2,0:2:3.01:53,3,0	1/1:3,3:6:11.40:153,11,0	1/1:0,2:1:3.01:53,3,0	1/1:2,2:3:9.03:132,9,0	0/0:16,0:15:41.01:0,41,393	0/0:9,0:7:10.30:0,10,111	0/0:12,0:11:21.04:0,21,249
chr10	90994033	.	AGG	A	874.40	PASS	AB=0.875;AC=23;AF=0.411;AN=56;BaseQRankSum=4.407;DP=335;FS=5.936;HRun=2;HaplotypeScore=50.8051;InbreedingCoeff=0.7006;MQ=49.33;MQ0=31;MQRankSum=-5.680;QD=15.08;ReadPosRankSum=1.755;VQSLOD=1.0076;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:11:23.29:0,23,261	0/0:7,0:7:21.07:0,21,326	0/0:63,0:7:14.19:0,14,163	0/0:57,0:13:23.87:0,24,244	0/0:22,0:22:46.43:0,46,456	1/1:0,3:2:6.02:72,6,0	1/1:5,1:6:14.99:164,15,0	0/0:28,0:27:54.65:0,55,674	0/0:4,0:3:2.16:0,2,28	1/1:6,1:5:12.03:144,12,0	1/1:2,2:4:12.04:155,12,0	0/0:9,0:9:20.28:0,20,191	1/1:0,4:4:12.04:151,12,0	0/0:5,0:5:5.23:0,5,44	0/0:8,0:7:6.90:0,7,228	1/1:3,0:2:3.01:36,3,0	0/1:12,1:14:14.15:14,0,362	1/1:2,1:3:3.01:36,3,0	0/0:12,0:12:12.37:0,12,192	0/0:7,0:7:17.63:0,18,189	0/0:7,0:5:8.76:0,9,62	1/1:1,1:2:3.01:36,3,0	1/1:4,2:6:11.40:114,11,0	1/1:2,0:1:3.01:36,3,0	1/1:4,0:3:9.03:109,9,0	0/0:16,0:15:41.01:0,41,401	0/0:8,0:7:10.04:0,10,120	0/0:12,0:11:21.07:0,21,269
chr10	90994035	.	GA	G	617.16	PASS	AB=0.872;AC=35;AF=0.625;AN=56;BaseQRankSum=-0.228;DP=337;FS=23.937;HRun=14;HaplotypeScore=50.6209;InbreedingCoeff=0.2330;MQ=53.05;MQ0=31;MQRankSum=1.048;QD=3.57;ReadPosRankSum=0.771;VQSLOD=-0.5648;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:18.35:0,18,144	0/0:7,0:7:17.97:0,18,159	0/0:63,0:7:11.22:0,11,75	0/0:57,0:15:11.03:0,11,73	0/1:16,6:22:12.87:116,0,13	1/1:3,0:2:3.11:8,3,0	0/1:6,0:6:6.44:6,0,8	0/1:16,11:27:20.65:171,0,21	1/1:4,0:3:0.45:1,0,0	0/1:8,0:6:1.04:2,0,1	0/1:5,0:5:2.90:3,0,11	1/1:6,3:9:8.52:61,9,0	1/1:4,0:4:2.97:7,3,0	1/1:5,0:5:0.93:17,1,0	0/0:8,0:7:15.02:0,15,139	1/1:3,0:2:1.55:4,2,0	0/0:13,0:14:9.26:0,9,193	1/1:3,0:3:1.55:4,2,0	0/1:8,3:11:15.99:50,0,16	0/1:5,2:7:10.85:32,0,11	1/1:2,0:5:7.04:32,7,0	1/1:1,0:1:1.55:4,2,0	1/1:6,0:6:4.93:13,5,0	1/1:2,0:1:1.55:4,2,0	0/1:5,0:4:2.76:3,0,11	1/1:13,3:15:17.64:120,18,0	0/1:6,2:7:10.53:32,0,11	1/1:8,4:11:12.99:85,13,0
chr10	90994106	.	G	GGGGTGGGGTGGGAAGATAACACAGTA	27135.93	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=4.814;DP=339;FS=43.374;HRun=0;HaplotypeScore=212.7711;InbreedingCoeff=0.9870;MQ=77.95;MQ0=0;MQRankSum=-12.977;QD=246.69;ReadPosRankSum=2.986;VQSLOD=3.4932;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.27:0,78,4740	0/0:6,0:6:18.06:0,18,1063	0/0:13,0:13:30.01:0,30,1033	0/0:10,0:10:25.26:0,25,981	0/0:14,0:14:42.14:0,42,2392	1/1:12,2:15:39.13:3809,39,0	1/1:16,0:16:39.13:3449,39,0	0/0:20,0:20:57.14:0,57,2586	0/0:8,0:8:24.08:0,24,1452	1/1:9,0:9:27.09:2023,27,0	1/1:10,1:12:33.11:3312,33,0	0/0:11,0:11:30.10:0,30,1759	1/1:5,2:7:21.03:2211,21,0	0/0:12,0:12:36.12:0,36,2208	0/0:12,0:12:33.11:0,33,2195	1/1:8,2:10:30.10:2778,30,0	0/0:18,0:18:54.19:0,54,3313	1/1:2,2:4:12.04:1170,12,0	0/0:17,0:17:45.15:0,45,2494	0/0:8,0:8:24.08:0,24,1535	0/0:18,0:18:48.16:0,48,2689	1/1:7,2:9:24.08:2672,24,0	1/1:8,0:8:21.07:1763,21,0	1/1:9,0:9:12.04:1309,12,0	1/1:8,3:11:30.02:2642,30,0	0/0:13,0:13:39.13:0,39,2226	0/0:12,0:12:33.10:0,33,1702	0/0:9,0:9:27.09:0,27,1785
chr10	90995232	.	A	ATGTGTGTGTGTGTGTGTGTGTG	22701.42	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=8.695;DP=722;FS=3.442;HRun=0;HaplotypeScore=406.1444;InbreedingCoeff=0.9225;MQ=59.27;MQ0=2;MQRankSum=-14.384;QD=83.16;ReadPosRankSum=0.533;VQSLOD=3.5057;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:35:78.20:0,78,3852	0/0:21,0:23:54.18:0,54,2717	0/0:25,0:19:32.58:0,33,961	0/0:22,0:19:39.09:0,39,1354	0/0:42,0:42:99:0,111,5819	1/1:19,2:22:30.07:2200,30,0	1/1:20,0:19:33.11:1980,33,0	0/0:34,0:35:78.23:0,78,2680	0/0:27,0:28:72.25:0,72,3929	1/1:26,1:31:72.23:3645,72,0	1/1:18,0:18:15.05:642,15,0	0/0:21,0:21:51.16:0,51,2596	1/1:16,1:17:24.08:1863,24,0	0/0:33,0:34:93.29:0,93,4607	0/0:25,0:26:72.22:0,72,3555	1/1:20,3:23:35.48:3029,35,0	0/1:31,0:32:20.13:20,0,2869	1/1:16,0:16:27.09:1925,27,0	0/0:25,0:25:54.17:0,54,2391	0/0:29,0:29:66.18:0,66,3311	0/0:36,0:39:90.31:0,90,4671	1/1:19,1:23:29.96:2386,30,0	1/1:15,2:19:21.07:1755,21,0	1/1:26,0:25:24.09:1638,24,0	1/1:19,2:25:21.07:1618,21,0	0/0:23,0:23:48.16:0,48,2247	0/0:28,0:28:81.25:0,81,3786	0/0:13,0:14:42.13:0,42,1784
chr10	90996859	.	A	AC	8522.54	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-15.398;DP=718;FS=18.766;HRun=4;HaplotypeScore=69.5998;InbreedingCoeff=0.9990;MQ=91.57;MQ0=0;MQRankSum=-1.756;QD=35.96;ReadPosRankSum=3.285;VQSLOD=3.0774;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,132,1487	0/0:9,0:9:27.08:0,27,306	0/0:33,0:33:84.04:0,84,936	0/0:29,0:29:69.09:0,69,735	0/0:15,0:15:42.12:0,42,476	1/1:0,12:12:36.03:468,36,0	1/1:1,24:25:66.18:881,66,0	0/0:29,0:29:81.17:0,81,894	0/0:23,0:23:66.15:0,66,734	1/1:1,23:24:66.22:900,66,0	1/1:2,13:15:30.10:409,30,0	0/0:27,0:27:78.18:0,78,869	1/1:0,25:25:69.23:939,69,0	0/0:34,0:34:96.27:0,96,1084	0/0:41,0:41:99:0,120,1360	1/1:3,22:25:32.23:827,32,0	0/0:50,0:50:99:0,129,1431	1/1:1,22:23:57.19:780,57,0	0/0:19,0:19:36.06:0,36,383	0/0:19,0:19:54.15:0,54,612	0/0:56,0:56:99:0,159,1803	1/1:0,17:17:51.17:697,51,0	1/1:0,18:18:51.17:697,51,0	1/1:1,42:43:99:1641,120,0	1/1:2,8:10:21.07:283,21,0	0/0:24,0:24:72.20:0,72,810	0/0:16,0:15:45.13:0,45,510	0/0:9,0:9:27.08:0,27,306
chr10	90998228	.	T	TTTAA	3005.04	PASS	AB=1.000;AC=21;AF=0.420;AN=50;BaseQRankSum=-8.322;DP=273;FS=3.357;HRun=0;HaplotypeScore=41.8141;InbreedingCoeff=0.7789;MQ=73.03;MQ0=0;MQRankSum=0.298;QD=25.47;ReadPosRankSum=1.138;VQSLOD=2.7901;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:15.04:0,15,218	0/0:3,0:3:9.03:0,9,145	./.	0/1:8,0:8:0:0,0,0	0/0:13,0:13:18.02:0,18,261	1/1:8,6:14:15.05:357,15,0	1/1:1,2:3:6.02:145,6,0	0/0:20,0:20:30.10:0,30,475	0/0:4,0:4:9.03:0,9,142	1/1:4,4:8:12.03:243,12,0	1/1:5,3:8:9.03:217,9,0	0/0:3,0:3:6.02:0,6,97	1/1:3,4:7:9.03:217,9,0	0/0:7,0:7:9.03:0,9,145	0/0:6,0:6:9.03:0,9,145	1/1:5,5:11:12.04:289,12,0	0/0:18,0:18:42.12:0,42,645	1/1:7,18:25:33.11:796,33,0	0/0:14,0:14:24.08:0,24,378	0/0:7,0:7:12.04:0,12,193	./.	1/1:4,1:5:3.01:72,3,0	1/1:5,1:6:6.02:128,6,0	./.	1/1:8,14:22:30.10:723,30,0	0/0:13,0:13:0.09:0,0,359	0/0:18,0:18:27.09:0,27,432	0/0:10,0:10:26.11:0,26,433
chr10	90999442	.	AT	A	7048.46	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=6.466;DP=490;FS=2.180;HRun=12;HaplotypeScore=52.7441;InbreedingCoeff=0.9275;MQ=65.51;MQ0=1;MQRankSum=-0.112;QD=17.94;ReadPosRankSum=1.230;VQSLOD=6.0314;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,3:40:58.71:0,59,945	0/0:8,0:8:18.04:0,18,183	0/0:13,0:9:20.09:0,20,170	0/0:9,0:8:11.44:0,11,86	1/1:4,28:33:52.25:574,52,0	1/1:2,20:22:56.78:441,57,0	1/1:2,13:15:38.83:299,39,0	1/1:6,24:30:68.69:531,69,0	1/1:2,13:15:38.85:302,39,0	1/1:6,16:22:47.76:366,48,0	1/1:2,19:21:29.30:406,29,0	1/1:4,16:20:41.83:325,42,0	1/1:2,10:12:29.88:232,30,0	1/1:0,8:8:20.92:163,21,0	0/0:6,0:6:12.01:0,12,117	1/1:2,10:12:32.87:255,33,0	0/0:19,1:20:30.80:0,31,476	1/1:3,20:24:55.82:424,56,0	1/1:7,13:21:40.87:308,41,0	1/1:2,23:26:64.51:484,65,0	1/1:0,3:3:8.97:70,9,0	1/1:1,12:13:32.87:255,33,0	1/1:5,12:18:34.90:261,35,0	1/1:0,4:4:11.95:93,12,0	1/1:4,16:20:41.82:325,42,0	1/1:7,17:25:52.74:397,53,0	1/1:2,14:18:45.89:337,46,0	1/1:1,10:11:2.44:202,2,0
chr10	90999552	.	TC	T	12239.39	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=5.379;DP=542;FS=5.681;HRun=5;HaplotypeScore=62.6917;InbreedingCoeff=0.9952;MQ=79.67;MQ0=0;MQRankSum=-5.042;QD=29.14;ReadPosRankSum=2.506;VQSLOD=5.3911;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,99,1304	0/0:11,0:11:27.09:0,27,369	0/0:19,0:19:54.16:0,54,721	0/0:16,0:16:39.12:0,39,516	1/1:1,27:28:75.21:850,75,0	1/1:1,11:12:21.06:238,21,0	1/1:2,20:22:60.17:680,60,0	1/1:1,22:23:66.19:748,66,0	1/1:0,15:15:42.12:476,42,0	1/1:2,26:28:78.22:885,78,0	1/1:2,22:24:57.16:646,57,0	1/1:3,22:25:60.17:680,60,0	1/1:1,14:15:39.11:442,39,0	1/1:0,15:15:42.12:476,42,0	0/0:13,0:13:27.09:0,27,369	1/1:0,7:7:15.04:170,15,0	0/0:24,0:24:69.23:0,69,940	1/1:1,25:26:75.21:851,75,0	1/1:3,20:23:60.17:681,60,0	1/1:3,18:21:57.16:645,57,0	1/1:2,29:31:66.19:749,66,0	1/1:1,12:13:27.08:306,27,0	1/1:1,15:16:42.08:462,42,0	1/1:1,14:15:42.12:476,42,0	1/1:1,14:15:36.06:394,36,0	1/1:1,15:16:42.10:467,42,0	1/1:0,16:16:39.11:442,39,0	1/1:0,14:14:42.12:476,42,0
chr10	91003298	.	TACAC	T	739.05	PASS	AB=0.900;AC=18;AF=0.375;AN=48;BaseQRankSum=4.970;DP=537;FS=31.185;HRun=0;HaplotypeScore=88.4619;InbreedingCoeff=0.4713;MQ=58.15;MQ0=16;MQRankSum=0.326;QD=3.54;ReadPosRankSum=-1.171;VQSLOD=0.1747;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:37:15.05:0,15,251	0/0:6,0:6:3.01:0,3,70	./.	./.	0/0:13,0:14:9.01:0,9,139	1/1:13,3:16:2.90:46,3,0	./.	0/0:21,0:20:0:0,0,0	0/0:15,0:15:6.02:0,6,91	1/1:22,0:22:6:73,6,0	1/1:19,5:24:3.01:46,3,0	0/0:17,0:17:5.75:0,6,61	1/1:12,5:18:8.06:114,8,0	0/0:13,0:12:6:0,6,71	0/0:20,0:20:14.79:0,15,201	1/1:15,7:22:11.86:164,12,0	0/0:20,0:18:14.79:0,15,214	1/1:12,5:18:4.32:88,4,0	0/1:17,0:17:35.98:36,0,39	0/0:6,0:6:6.02:0,6,110	0/0:32,0:31:12.03:0,12,206	1/1:14,2:16:2.85:24,3,0	./.	0/1:27,8:33:3.09:253,0,3	1/1:13,5:18:2.87:46,3,0	0/0:11,0:11:5.30:0,5,49	0/0:11,0:10:3.01:0,3,43	0/0:6,0:6:9.03:0,9,172
chr10	91004064	.	AT	A	3908.09	PASS	AB=0.923;AC=23;AF=0.411;AN=56;BaseQRankSum=-5.822;DP=521;FS=1.656;HRun=11;HaplotypeScore=70.2051;InbreedingCoeff=0.9416;MQ=72.51;MQ0=1;MQRankSum=-0.302;QD=17.45;ReadPosRankSum=-0.329;VQSLOD=4.4346;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,1:41:80.37:0,80,1022	0/0:6,0:6:15.04:0,15,159	0/0:13,0:12:26.28:0,26,212	0/1:11,1:12:3.45:3,0,151	1/1:4,15:19:16.26:338,16,0	0/0:1,0:14:25.57:0,26,128	0/0:0,0:11:22.73:0,23,114	1/1:7,24:31:68.85:557,69,0	1/1:2,13:15:23.96:197,24,0	0/0:2,0:21:52.38:0,52,304	0/0:4,0:11:25.82:0,26,139	1/1:3,8:11:20.97:172,21,0	0/0:4,0:9:20.24:0,20,127	1/1:2,16:18:38.94:320,39,0	0/0:19,0:19:45.11:0,45,480	0/0:3,0:19:31.25:0,31,157	0/0:27,1:28:47.54:0,48,711	0/0:4,0:33:68.18:0,68,342	1/1:4,24:28:62.31:572,62,0	1/1:1,19:20:56.93:468,57,0	1/1:2,14:16:32.96:271,33,0	0/0:1,0:10:22.84:0,23,118	0/0:4,0:23:46.89:0,47,261	0/0:2,0:13:24.28:0,24,118	0/0:1,0:25:51.17:0,51,256	1/1:3,22:25:59.86:493,60,0	1/1:2,14:16:35.94:296,36,0	1/1:4,9:13:26.96:222,27,0
chr10	91004969	.	GTATGTGTGCATGTAC	G	7505.27	PASS	AB=0.639;AC=19;AF=0.352;AN=54;BaseQRankSum=10.510;DP=756;FS=6.360;HRun=0;HaplotypeScore=306.4563;InbreedingCoeff=0.8883;MQ=69.53;MQ0=1;MQRankSum=-10.275;QD=29.09;ReadPosRankSum=0.517;VQSLOD=2.2832;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:65.86:0,66,3514	0/0:11,0:11:24.08:0,24,1552	0/0:31,0:29:35.05:0,35,944	0/0:39,0:37:64.39:0,64,1808	1/1:10,14:24:12.03:499,12,0	0/0:16,0:16:30.09:0,30,1285	0/0:24,0:24:48.14:0,48,2210	1/1:35,0:35:12.03:246,12,0	1/1:7,17:24:12.04:501,12,0	0/0:35,0:35:87.30:0,87,4934	0/0:25,0:25:63.22:0,63,3485	1/1:6,19:25:15.05:625,15,0	0/0:29,0:29:78.27:0,78,4229	1/1:9,19:28:15.05:625,15,0	0/0:45,0:45:87.28:0,87,4512	0/0:35,0:35:75.24:0,75,4288	0/0:17,0:17:33.11:0,33,1803	0/0:11,0:11:30.10:0,30,1719	1/1:12,9:21:24.07:781,24,0	1/1:11,15:26:9.03:375,9,0	./.	0/0:36,0:36:81.28:0,81,4485	0/0:26,0:26:66.23:0,66,3831	0/0:27,0:27:51.18:0,51,2788	0/0:27,0:27:45.15:0,45,2621	0/1:10,13:23:99:1168,0,270	1/1:9,16:24:23.86:971,24,0	1/1:5,22:27:45.15:1714,45,0
chr10	91006545	.	C	CCTCTCTCTCT	7882.43	PASS	AB=1.000;AC=40;AF=0.741;AN=54;BaseQRankSum=1.603;DP=644;FS=26.587;HRun=0;HaplotypeScore=219.8446;InbreedingCoeff=0.6056;MQ=61.78;MQ0=3;MQRankSum=-7.422;QD=16.56;ReadPosRankSum=-4.950;VQSLOD=1.5232;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:36:42.38:0,42,998	0/0:8,0:12:21.07:0,21,568	0/1:21,0:15:13.19:13,0,117	0/0:39,0:28:9.71:0,10,200	1/1:21,0:20:3.01:65,3,0	1/1:15,1:18:9.03:441,9,0	1/1:28,2:28:9.03:447,9,0	1/1:28,0:27:29.30:562,29,0	1/1:25,0:25:15.05:530,15,0	1/1:24,0:24:18.06:578,18,0	1/1:10,0:10:9.03:282,9,0	1/1:19,0:19:3.01:130,3,0	1/1:17,4:25:21.07:900,21,0	1/1:23,0:26:3.01:131,3,0	0/0:20,0:22:36.11:0,36,936	1/1:28,2:34:22.12:613,22,0	0/0:20,0:20:45.11:0,45,1226	1/1:12,0:12:9:232,9,0	1/1:22,0:20:25.25:609,25,0	1/1:24,0:22:6.02:117,6,0	./.	1/1:23,0:23:3.01:71,3,0	0/0:11,3:19:0.06:0,0,0	1/1:21,1:26:11.87:369,12,0	1/1:15,0:15:6.02:136,6,0	1/1:40,0:38:48.13:1527,48,0	0/1:22,0:20:0:0,0,0	1/1:10,0:9:3.01:130,3,0
chr10	91011250	.	TA	T	2058.56	PASS	AC=28;AF=0.560;AN=50;BaseQRankSum=0.578;DP=362;FS=0.000;HRun=6;HaplotypeScore=31.3036;InbreedingCoeff=0.7323;MQ=24.93;MQ0=162;MQRankSum=3.834;QD=9.85;ReadPosRankSum=-1.811;VQSLOD=-0.4635;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:8:12.04:0,12,158	0/0:8,0:3:9.03:0,9,118	./.	./.	1/1:5,9:8:3.01:32,3,0	1/1:4,14:12:9.02:96,9,0	1/1:5,17:15:27.07:290,27,0	1/1:4,13:11:30.06:312,30,0	1/1:2,18:14:12.03:129,12,0	0/0:17,0:9:27.09:0,27,355	0/0:8,0:4:6.02:0,6,76	1/1:0,16:10:2.93:32,3,0	0/0:15,0:10:9.03:0,9,118	1/1:1,16:11:8.95:97,9,0	0/0:8,0:7:3.01:0,3,39	0/0:8,0:5:8.82:0,9,114	0/0:15,0:3:3.01:0,3,39	0/0:17,0:8:15.05:0,15,197	1/1:1,10:9:24.06:258,24,0	1/1:1,7:2:6.02:64,6,0	./.	0/0:12,0:8:15.05:0,15,195	1/1:2,9:7:6.01:65,6,0	1/1:3,14:4:6.02:64,6,0	0/0:9,0:3:9.03:0,9,118	1/1:1,26:21:60.15:644,60,0	1/1:0,8:4:9.02:97,9,0	1/1:0,3:2:6.02:64,6,0
chr10	91011689	.	C	CACTATCATCA	4978.64	PASS	AC=34;AF=1.000;AN=34;DP=44;FS=0.000;HRun=0;HaplotypeScore=88.4006;InbreedingCoeff=0.0521;MQ=61.53;MQ0=0;QD=118.54;VQSLOD=5.0858;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:2.98:21,3,0	./.	1/1:1,0:1:0.47:1,0,0	./.	1/1:0,4:4:12.04:470,12,0	1/1:0,4:4:12.04:527,12,0	./.	./.	1/1:0,1:1:3.01:128,3,0	./.	1/1:0,4:4:12.04:467,12,0	1/1:0,2:2:6.02:249,6,0	1/1:0,5:5:15.05:665,15,0	./.	1/1:0,2:2:6.02:247,6,0	1/1:0,3:3:9.03:405,9,0	1/1:0,1:1:3.01:123,3,0	./.	./.	1/1:1,2:3:9.02:259,9,0	./.	1/1:0,2:2:6.02:235,6,0	1/1:0,1:1:3.01:116,3,0	1/1:0,3:3:9.03:387,9,0	./.	1/1:0,2:2:6.02:284,6,0	1/1:0,3:3:9.03:396,9,0	./.
chr10	91011713	.	CAAGGG	C	706.13	PASS	AB=0.833;AC=35;AF=0.875;AN=40;BaseQRankSum=2.015;DP=56;FS=2.629;HRun=0;HaplotypeScore=109.1711;InbreedingCoeff=-0.0084;MQ=120.72;MQ0=0;MQRankSum=-1.699;QD=13.08;ReadPosRankSum=2.015;VQSLOD=3.1923;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:1,1:2:0.47:0,0,1	1/1:1,0:1:3.01:30,3,0	0/1:8,0:8:8.92:195,0,9	0/1:4,0:4:11.70:47,0,12	1/1:0,4:4:8.98:31,9,0	1/1:1,4:5:11.57:63,12,0	./.	./.	1/1:0,1:1:2.94:18,3,0	./.	1/1:0,4:4:7.04:24,7,0	1/1:0,2:2:5.72:29,6,0	1/1:0,5:5:14:66,14,0	./.	1/1:0,2:2:5.64:27,6,0	1/1:0,3:3:8.75:50,9,0	1/1:0,1:1:2.74:12,3,0	./.	./.	0/1:0,2:2:3.40:14,0,3	./.	1/1:0,2:2:4.15:14,4,0	1/1:0,1:1:2.04:6,2,0	1/1:0,3:3:4.05:9,4,0	1/1:1,0:1:3:28,3,0	1/1:0,2:2:6.02:70,6,0	1/1:1,2:3:8.79:65,9,0	./.
chr10	91011720	.	C	CATCTA	14303.85	PASS	AB=0.662;AC=52;AF=0.929;AN=56;BaseQRankSum=0.733;DP=309;FS=8.416;HRun=0;HaplotypeScore=325.0086;InbreedingCoeff=0.2493;MQ=71.50;MQ0=0;MQRankSum=-0.978;QD=46.59;ReadPosRankSum=2.444;VQSLOD=3.4806;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:30.96:498,31,0	1/1:5,0:5:15.05:335,15,0	0/1:5,5:12:18.31:515,0,18	0/1:5,2:9:4.47:331,0,4	1/1:17,0:17:39.11:662,39,0	1/1:12,0:12:27.09:512,27,0	1/1:14,0:14:29.89:485,30,0	1/1:21,0:20:56.51:1102,57,0	1/1:12,0:12:30.10:552,30,0	1/1:12,0:12:35.95:751,36,0	1/1:11,0:11:30.06:489,30,0	1/1:11,0:11:30.10:515,30,0	1/1:9,0:9:24.08:416,24,0	1/1:8,0:8:24.08:444,24,0	1/1:10,0:10:30.10:581,30,0	1/1:16,0:16:45.15:852,45,0	1/1:12,0:12:30.10:542,30,0	1/1:3,0:3:9.01:137,9,0	1/1:8,0:8:24.08:571,24,0	1/1:11,0:11:29.95:451,30,0	0/0:2,0:2:1.82:0,2,5	1/1:16,0:16:44.07:827,44,0	1/1:9,0:9:24.08:454,24,0	1/1:8,0:8:14.76:216,15,0	1/1:5,0:5:15.05:328,15,0	1/1:14,0:14:42.13:834,42,0	1/1:16,0:16:35.93:723,36,0	1/1:5,0:5:9.03:179,9,0
chr10	91011803	.	TACAC	T	913.16	PASS	AB=0.925;AC=23;AF=0.479;AN=48;BaseQRankSum=1.230;DP=371;FS=3.363;HRun=0;HaplotypeScore=94.2828;InbreedingCoeff=0.2514;MQ=53.24;MQ0=22;MQRankSum=0.074;QD=4.76;ReadPosRankSum=2.408;VQSLOD=1.7320;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,1:30:24.29:47,0,24	0/0:6,0:6:3.01:0,3,67	./.	./.	1/1:6,4:10:6.02:92,6,0	0/0:9,0:9:0:0,0,0	1/1:18,1:18:2.77:44,3,0	0/0:15,0:12:0:0,0,0	0/0:10,0:11:5.49:0,5,24	0/1:12,0:12:8.90:72,0,9	0/0:10,0:11:5.15:0,5,23	./.	0/0:4,0:6:9.12:0,9,38	1/1:3,0:3:3.01:39,3,0	0/0:14,0:14:14.75:0,15,270	0/1:17,1:16:17.72:41,0,18	0/0:19,0:19:34.42:0,34,560	0/1:6,1:9:16.91:37,0,17	0/0:9,0:9:0.47:0,0,1	./.	1/1:14,0:11:6:62,6,0	0/1:15,0:14:6.73:25,0,7	1/1:8,1:11:6.01:74,6,0	1/1:12,2:14:9.03:131,9,0	0/0:10,0:12:2.32:0,2,12	1/1:8,0:8:7.75:56,8,0	1/1:6,3:9:11.83:183,12,0	1/1:13,2:16:1.87:155,2,0
chr10	91012097	.	A	ATATCTCTCTCTCTC	7205.59	PASS	AC=28;AF=0.519;AN=54;BaseQRankSum=-5.199;DP=515;FS=5.437;HRun=0;HaplotypeScore=186.4063;InbreedingCoeff=0.8681;MQ=61.08;MQ0=7;MQRankSum=-1.526;QD=25.02;ReadPosRankSum=-4.121;VQSLOD=2.8901;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:70.18:0,70,2006	0/0:4,0:5:15:0,15,270	0/0:20,0:13:15.59:0,16,257	0/0:23,0:11:7.09:0,7,237	1/1:26,0:24:32.84:273,33,0	1/1:12,0:32:6.02:293,6,0	1/1:21,0:21:33.45:402,33,0	1/1:34,0:34:99:1252,101,0	1/1:4,12:20:6.49:367,6,0	0/0:20,0:19:47.75:0,48,794	0/0:16,0:16:0.33:0,0,229	1/1:5,6:15:3.01:204,3,0	0/0:7,0:7:15:0,15,145	1/1:4,0:12:6.39:153,6,0	0/0:16,0:16:41.76:0,42,1120	0/0:17,0:17:34.68:0,35,546	0/0:19,0:20:59.97:0,60,1286	0/0:8,0:8:18.02:0,18,238	1/1:6,0:19:50.98:1352,51,0	1/1:15,0:15:29.86:234,30,0	1/1:12,0:12:17.68:141,18,0	0/0:15,0:15:11.01:0,11,355	1/1:14,0:13:17.99:243,18,0	./.	0/0:12,0:12:24.03:0,24,363	1/1:18,0:17:46.28:877,46,0	1/1:8,14:25:18.06:976,18,0	1/1:23,0:22:56.73:440,57,0
chr10	91012129	.	CTCTG	C	1351.96	PASS	AB=0.991;AC=26;AF=0.464;AN=56;BaseQRankSum=-1.064;DP=450;FS=7.266;HRun=0;HaplotypeScore=110.7400;InbreedingCoeff=-0.1433;MQ=45.80;MQ0=19;MQRankSum=0.476;QD=4.17;ReadPosRankSum=-2.294;VQSLOD=1.3518;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:5.79:0,6,1070	0/0:6,0:6:14.54:0,15,137	0/0:11,0:2:5.88:0,6,37	0/0:20,0:6:7.15:0,7,50	0/1:16,0:15:36.18:75,0,36	0/1:16,0:16:34.32:34,0,37	1/1:27,0:27:15.61:280,16,0	0/1:32,0:28:99:116,0,141	0/1:14,0:13:35.29:35,0,44	0/1:20,0:19:40.57:41,0,142	0/0:14,0:14:14.91:0,15,117	0/1:16,0:16:11.71:116,0,12	0/1:8,0:8:32.31:46,0,32	0/1:8,0:8:1.69:76,0,2	0/1:21,4:23:4.84:5,0,678	0/1:20,0:20:6.42:6,0,131	0/0:17,0:16:47.52:0,48,612	0/1:8,0:8:5.77:6,0,14	0/1:16,0:15:99:124,0,202	1/1:5,0:5:5.99:49,6,0	1/1:20,0:19:23.69:188,24,0	0/0:16,0:16:10.12:0,10,132	0/1:5,0:5:18.56:19,0,19	1/1:13,0:10:11.98:95,12,0	0/1:10,0:9:6.47:6,0,51	0/1:16,0:15:69.86:70,0,243	0/1:21,0:21:91.91:92,0,223	1/1:8,0:7:5.07:42,5,0
chr10	91012131	.	CTGTGTGTGTGTG	C	1436.18	PASS	AB=0.769;AC=9;AF=0.161;AN=56;BaseQRankSum=6.939;DP=452;FS=9.673;HRun=0;HaplotypeScore=157.5847;InbreedingCoeff=0.1947;MQ=43.95;MQ0=20;MQRankSum=-5.774;QD=15.78;ReadPosRankSum=1.295;VQSLOD=2.0382;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:84.29:0,84,3914	0/0:6,0:6:15.05:0,15,675	0/0:15,0:2:3.01:0,3,118	0/0:21,0:5:0.47:0,0,1	0/0:13,0:12:15.38:0,15,552	0/0:18,0:18:14.71:0,15,390	0/0:26,0:26:42.14:0,42,1269	0/0:23,0:26:45.05:0,45,1032	0/0:14,0:13:2.59:0,3,335	0/1:10,7:20:34.35:724,0,34	0/0:8,3:13:2.84:0,3,14	0/0:16,0:16:20.14:0,20,607	1/1:5,3:8:11.79:384,12,0	0/1:8,0:8:11.76:12,0,299	0/0:26,0:24:48.16:0,48,2389	0/1:5,10:19:99:190,0,127	0/0:19,0:18:42.14:0,42,1945	1/1:3,1:9:5.86:165,6,0	0/0:16,0:15:38.80:0,39,1102	0/0:6,0:6:9.03:0,9,319	0/0:19,0:18:24.55:0,25,719	0/1:13,2:16:18.40:57,0,18	0/0:5,0:5:3.01:0,3,100	0/0:13,0:10:12.04:0,12,433	0/1:7,0:9:36.41:42,0,36	0/0:15,0:14:30.10:0,30,1162	0/0:21,0:21:36.21:0,36,1356	0/0:7,0:6:6.02:0,6,160
chr10	91012251	.	G	GA	3176.04	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-9.642;DP=541;FS=0.832;HRun=9;HaplotypeScore=55.1824;InbreedingCoeff=0.9517;MQ=72.22;MQ0=0;MQRankSum=1.975;QD=25.61;ReadPosRankSum=1.991;VQSLOD=4.3471;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,1:40:74.70:0,75,861	0/0:9,0:9:17.98:0,18,154	0/0:14,0:13:18.51:0,19,175	0/0:8,0:8:23.82:0,24,184	0/0:18,0:18:47.98:0,48,417	0/0:27,0:27:77.65:0,78,661	0/0:19,0:19:45.44:0,45,388	0/0:23,0:23:47.92:0,48,403	0/0:17,0:17:50.97:0,51,438	1/1:4,16:20:45.11:490,45,0	1/1:1,24:25:72.07:767,72,0	0/0:11,0:11:32.99:0,33,286	1/1:3,8:11:1.02:239,1,0	0/0:11,0:11:26.97:0,27,230	0/0:21,0:21:50.98:0,51,443	1/1:2,21:23:54.15:597,54,0	0/0:25,0:25:71.98:0,72,625	1/1:0,15:14:45.12:498,45,0	0/0:18,0:18:47.97:0,48,411	0/0:22,0:22:59.98:0,60,521	0/0:26,0:26:65.97:0,66,570	1/1:5,12:18:41.95:444,42,0	0/0:25,0:25:65.96:0,66,567	0/0:25,0:25:56.97:0,57,495	1/1:2,10:12:30.08:332,30,0	0/0:21,1:22:17.80:0,18,383	0/0:24,0:24:59.97:0,60,520	0/0:11,0:11:26.99:0,27,234
chr10	91012845	.	T	TCC	721.66	PASS	AB=0.943;AC=15;AF=0.300;AN=50;BaseQRankSum=-4.593;DP=248;FS=30.655;HRun=0;HaplotypeScore=45.5085;InbreedingCoeff=0.1581;MQ=26.04;MQ0=67;MQRankSum=0.883;QD=7.29;ReadPosRankSum=-4.016;VQSLOD=0.8545;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:2:3.01:0,3,30	0/0:5,0:4:9.91:0,10,101	./.	./.	0/1:17,0:17:47.51:107,0,48	1/1:6,0:4:0.63:73,1,0	0/0:3,0:3:7.11:0,7,23	1/1:6,0:3:8.99:117,9,0	0/1:8,1:8:30.64:31,0,42	0/0:11,0:9:23.63:0,24,224	0/0:17,0:16:23.72:0,24,193	0/1:4,0:3:2.42:32,0,2	0/0:5,0:4:12:0,12,105	1/1:6,1:7:1.29:95,1,0	0/0:7,0:6:8.61:0,9,79	0/0:7,0:7:9.01:0,9,84	0/0:14,0:3:3.89:0,4,31	0/0:8,0:3:2.99:0,3,24	0/1:11,0:7:2.06:101,0,2	0/0:9,0:8:7.40:0,7,38	./.	0/0:7,0:6:9:0,9,82	1/1:10,0:7:0.32:90,0,0	0/1:4,0:3:2.42:28,0,2	0/0:12,0:11:16.89:0,17,129	0/1:11,4:15:59.23:156,0,59	0/1:9,1:10:22.04:33,0,22	0/0:5,0:3:6.48:0,6,51
chr10	91012849	.	TTC	T	837.19	PASS	AB=0.982;AC=40;AF=0.800;AN=50;BaseQRankSum=3.832;DP=240;FS=9.431;HRun=0;HaplotypeScore=45.8713;InbreedingCoeff=-0.0498;MQ=26.01;MQ0=62;MQRankSum=0.750;QD=4.08;ReadPosRankSum=1.662;VQSLOD=0.6250;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:2:2.80:0,3,13	0/1:5,0:4:11.94:12,0,34	./.	./.	1/1:10,5:15:1.78:62,2,0	1/1:4,2:4:7.74:35,8,0	1/1:3,0:3:6.66:22,7,0	1/1:5,1:3:5.30:17,5,0	1/1:10,0:9:20.37:94,20,0	0/1:11,0:9:14.84:15,0,16	1/1:17,0:16:7.69:99,8,0	1/1:4,0:3:2.84:9,3,0	0/1:5,1:4:6.22:6,0,23	1/1:7,0:7:13.64:65,14,0	0/1:6,0:5:8.81:9,0,22	0/1:7,0:7:3.72:9,0,4	1/1:14,0:3:4.52:24,5,0	1/1:8,0:3:2.60:10,3,0	1/1:8,0:5:11.54:84,12,0	1/1:8,0:7:3.95:51,4,0	./.	0/1:7,0:6:4.36:16,0,4	1/1:9,0:7:13.41:59,13,0	1/1:4,0:3:5.14:25,5,0	0/1:13,0:11:15.74:26,0,16	1/1:14,0:14:4.92:89,5,0	1/1:11,0:11:24.27:120,24,0	0/1:6,0:4:8.93:9,0,11
chr10	91012935	.	C	CA	599.22	PASS	AC=40;AF=0.909;AN=44;BaseQRankSum=2.038;DP=92;FS=0.000;HRun=0;HaplotypeScore=64.5341;InbreedingCoeff=0.2506;MQ=51.09;MQ0=9;MQRankSum=-2.399;QD=7.59;ReadPosRankSum=0.490;VQSLOD=3.3228;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,2:2:5.77:31,6,0	0/0:3,0:2:3.01:0,3,42	0/0:5,0:1:3.01:0,3,36	1/1:2,3:4:8.20:36,8,0	1/1:1,5:4:11.40:57,11,0	./.	1/1:3,5:5:14.80:97,15,0	./.	1/1:0,1:1:2.96:19,3,0	1/1:5,3:3:8.10:34,8,0	1/1:1,1:1:2.88:15,3,0	1/1:2,3:3:8.38:39,8,0	1/1:0,1:1:2.80:13,3,0	1/1:2,4:4:8.55:43,9,0	1/1:1,5:4:11.46:59,11,0	1/1:1,1:1:2.92:17,3,0	1/1:1,2:1:2.94:18,3,0	1/1:0,3:3:8.91:61,9,0	./.	1/1:0,1:1:2.80:13,3,0	1/1:3,1:1:2.84:14,3,0	1/1:1,1:1:2.74:12,3,0	./.	./.	1/1:1,4:5:11.33:64,11,0	1/1:3,3:4:8.26:40,8,0	1/1:2,1:1:2.92:17,3,0
chr10	91012938	.	GT	G	339.30	PASS	AC=40;AF=0.909;AN=44;BaseQRankSum=2.773;DP=83;FS=11.950;HRun=1;HaplotypeScore=67.3900;InbreedingCoeff=0.2923;MQ=53.53;MQ0=3;MQRankSum=-2.898;QD=4.65;ReadPosRankSum=1.897;VQSLOD=-0.7553;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,2:2:4.82:18,5,0	0/0:3,0:2:6.02:0,6,96	0/0:5,0:1:3.01:0,3,43	1/1:1,3:3:6.70:29,7,0	1/1:1,5:4:9.03:31,9,0	./.	1/1:1,5:5:13.82:63,14,0	./.	1/1:0,1:1:2.74:12,3,0	1/1:5,3:3:6.30:27,6,0	1/1:1,1:1:2.50:9,2,0	1/1:2,3:3:6.26:19,6,0	1/1:0,1:1:2.04:6,2,0	1/1:1,4:4:6.81:23,7,0	1/1:1,5:4:9.31:33,9,0	1/1:0,1:1:2.60:10,3,0	1/1:0,2:1:2.68:11,3,0	1/1:0,3:3:8.42:41,8,0	./.	1/1:0,1:1:2.94:18,3,0	1/1:3,1:1:2.94:18,3,0	1/1:1,1:1:2.04:6,2,0	./.	./.	1/1:1,4:5:8.97:37,9,0	1/1:3,3:4:5.70:20,6,0	1/1:2,1:1:2.60:10,3,0
chr10	91014278	.	T	TATACATAC	10832.43	PASS	AB=0.832;AC=40;AF=0.714;AN=56;BaseQRankSum=4.431;DP=740;FS=1.137;HRun=0;HaplotypeScore=192.8973;InbreedingCoeff=0.6089;MQ=62.18;MQ0=7;MQRankSum=-2.519;QD=18.81;ReadPosRankSum=-2.386;VQSLOD=4.0884;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:75.17:0,75,1547	0/0:11,0:11:18.03:0,18,373	0/0:28,0:16:11.84:0,12,88	0/0:28,0:23:14.40:0,14,244	1/1:11,0:30:19.99:299,20,0	1/1:10,0:20:6.02:138,6,0	0/1:34,0:34:6.15:390,0,6	0/1:23,0:23:39.96:77,0,40	1/1:8,0:19:26.97:221,27,0	1/1:18,16:35:60.21:2167,60,0	1/1:11,13:26:8.60:346,9,0	1/1:5,0:22:38.90:312,39,0	1/1:12,5:18:15.04:618,15,0	1/1:10,0:26:23.97:198,24,0	0/0:28,0:28:51.13:0,51,1072	1/1:13,12:28:30.10:1231,30,0	0/0:26,0:26:45.14:0,45,843	1/1:10,19:30:21.05:767,21,0	1/1:10,0:19:28.82:205,29,0	1/1:10,0:28:35.95:295,36,0	1/1:12,0:35:26.97:221,27,0	1/1:5,16:24:18.04:716,18,0	1/1:10,11:23:18.05:642,18,0	1/1:10,10:24:6.49:247,6,0	1/1:7,17:29:21.07:852,21,0	1/1:11,0:34:68.88:559,69,0	0/1:9,0:27:40.14:225,0,40	0/1:10,0:16:57.98:108,0,58
chr10	91014474	.	TAC	T	410.94	PASS	AB=0.954;AC=26;AF=0.650;AN=40;BaseQRankSum=0.666;DP=353;FS=0.000;HRun=0;HaplotypeScore=43.3799;InbreedingCoeff=0.1715;MQ=57.67;MQ0=11;MQRankSum=0.411;QD=2.28;ReadPosRankSum=-0.637;VQSLOD=0.6074;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:6.02:0,6,87	0/0:3,0:3:3:0,3,25	./.	./.	1/1:6,0:6:2.99:23,3,0	0/1:15,0:13:19.31:52,0,19	1/1:13,0:12:3.01:31,3,0	./.	1/1:5,0:5:3.01:32,3,0	1/1:13,0:13:1.39:4,1,0	0/0:5,0:5:3:0,3,25	./.	./.	1/1:12,1:13:3.01:32,3,0	0/0:16,0:15:6.01:0,6,66	./.	0/0:23,0:26:12.02:0,12,130	0/1:10,1:9:26.09:54,0,26	./.	1/1:13,1:14:3.01:32,3,0	1/1:20,6:23:9.02:96,9,0	1/1:6,2:8:3.01:32,3,0	1/1:3,1:4:3.01:32,3,0	0/1:16,2:18:19.90:20,0,78	./.	1/1:17,0:21:8.78:63,9,0	1/1:9,1:9:3.01:32,3,0	0/1:3,0:3:4.27:4,0,18
chr10	91014760	.	A	AG	11214.62	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-6.078;DP=350;FS=0.000;HRun=1;HaplotypeScore=40.5372;InbreedingCoeff=0.9561;MQ=88.65;MQ0=0;MQRankSum=-4.748;QD=40.78;ReadPosRankSum=0.325;VQSLOD=4.7747;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.19:0,57,738	0/0:5,0:5:15.05:0,15,194	0/0:14,0:14:38.32:0,38,464	0/0:12,0:12:33.07:0,33,395	1/1:0,16:16:45.08:631,45,0	1/1:2,20:22:63.13:888,63,0	1/1:1,6:7:20.97:265,21,0	1/1:1,25:26:75.18:1017,75,0	1/1:0,9:9:24.08:359,24,0	1/1:0,25:25:75.24:1094,75,0	1/1:1,15:16:39.13:573,39,0	1/1:0,13:13:39.13:584,39,0	1/1:1,6:7:21.05:293,21,0	1/1:0,11:11:33.11:494,33,0	0/0:11,0:11:33.10:0,33,417	1/1:1,7:8:18.06:268,18,0	0/0:14,0:14:42.11:0,42,515	1/1:1,6:7:15.05:224,15,0	1/1:0,26:26:78.25:1144,78,0	1/1:1,10:11:30.10:449,30,0	1/1:0,10:10:30.10:449,30,0	1/1:0,10:10:27.09:404,27,0	1/1:2,6:8:21.05:293,21,0	1/1:0,4:4:9.03:135,9,0	1/1:0,11:11:33.11:485,33,0	1/1:0,15:15:45.15:673,45,0	1/1:0,11:11:27.09:404,27,0	1/1:0,2:2:6.02:90,6,0
chr10	91015452	.	CCACACA	C	3489.92	PASS	AB=0.836;AC=21;AF=0.375;AN=56;BaseQRankSum=0.255;DP=987;FS=1.061;HRun=0;HaplotypeScore=258.5202;InbreedingCoeff=0.7174;MQ=57.40;MQ0=32;MQRankSum=-7.632;QD=9.26;ReadPosRankSum=1.518;VQSLOD=2.4770;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:53:99:0,114,3262	0/0:11,0:12:21.93:0,22,495	0/0:83,0:23:15.04:0,15,284	0/1:84,0:25:14.99:15,0,188	0/0:19,0:24:33.10:0,33,711	1/1:11,8:22:6.74:106,7,0	1/1:19,21:37:12.93:253,13,0	0/0:36,0:34:37.36:0,37,762	0/0:17,0:30:57.19:0,57,1240	1/1:18,13:29:39.12:740,39,0	0/1:13,2:18:0:0,0,0	0/0:22,0:35:60.16:0,60,1344	1/1:10,22:35:48.16:903,48,0	0/0:30,0:45:66.22:0,66,1540	0/0:43,0:50:99:0,108,2919	1/1:16,18:38:42.01:774,42,0	0/0:33,0:37:85.75:0,86,2696	0/1:12,5:21:99:364,0,197	0/0:17,0:19:27.09:0,27,623	0/0:12,0:31:30.10:0,30,726	0/0:39,0:84:79.21:0,79,2178	1/1:15,11:27:6.02:81,6,0	1/1:9,7:16:6.02:108,6,0	1/1:18,6:22:6.02:98,6,0	1/1:8,6:16:2.91:48,3,0	0/0:25,0:35:18.73:0,19,1587	0/0:12,0:17:27.08:0,27,591	0/0:2,0:4:9.03:0,9,205
chr10	91015527	.	C	CAT	1433.78	PASS	AB=0.863;AC=9;AF=0.161;AN=56;BaseQRankSum=4.415;DP=978;FS=3.620;HRun=0;HaplotypeScore=192.1935;InbreedingCoeff=-0.2024;MQ=50.32;MQ0=31;MQRankSum=-0.286;QD=5.54;ReadPosRankSum=-1.009;VQSLOD=3.2361;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,136,1865	0/0:13,0:13:27.06:0,27,370	0/0:43,0:6:8.98:0,9,111	0/0:50,0:14:10.38:0,10,157	0/0:26,0:26:45.14:0,45,664	0/0:12,7:19:8.82:0,9,121	0/1:34,3:33:99:425,0,271	0/0:49,0:44:99:0,119,1672	0/0:34,0:34:77.87:0,78,1162	0/1:27,3:29:99:296,0,410	0/0:5,3:8:9.03:0,9,132	0/0:41,0:41:96.57:0,97,1290	0/1:21,9:30:99:268,0,202	0/0:47,0:46:99:0,110,1484	0/0:37,0:37:93.25:0,93,1332	0/1:26,13:38:89.67:204,0,90	0/0:36,0:36:99:0,102,1451	0/1:16,3:19:99:112,0,393	0/0:24,0:17:39.11:0,39,535	0/0:25,0:25:60.14:0,60,867	0/0:125,0:111:99:0,214,3075	0/1:23,5:28:59.75:60,0,350	0/1:17,0:16:31.25:31,0,187	0/1:30,4:30:91.26:91,0,201	0/1:18,6:24:87.54:88,0,125	0/0:54,0:52:99:0,138,1877	0/0:25,0:24:57.03:0,57,805	0/0:11,0:11:31.15:0,31,380
chr10	91015613	.	GACACACACACACAGACACACACACATAC	G	5523.82	PASS	AB=0.963;AC=19;AF=0.339;AN=56;BaseQRankSum=2.145;DP=967;FS=0.916;HRun=0;HaplotypeScore=523.2521;InbreedingCoeff=0.6889;MQ=49.13;MQ0=23;MQRankSum=-2.058;QD=20.16;ReadPosRankSum=-3.894;VQSLOD=0.7617;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:56:99:0,144,6898	0/0:11,0:11:30.10:0,30,1331	0/0:27,0:6:5.57:0,6,128	0/0:53,0:17:24.06:0,24,705	1/1:8,14:22:9.03:163,9,0	0/0:33,0:32:46.41:0,46,2426	0/0:65,0:59:54.03:0,54,2913	0/1:39,0:32:38.66:1142,0,39	1/1:22,0:23:21.83:472,22,0	0/0:55,0:55:99:0,102,5259	0/0:30,0:28:37.87:0,38,2800	1/1:17,0:17:23.19:577,23,0	0/0:42,0:42:88.14:0,88,3313	1/1:26,0:25:13.16:267,13,0	0/0:41,0:40:95.56:0,96,4846	0/0:45,0:45:75.24:0,75,3410	0/0:47,0:46:99:0,114,5132	0/0:33,0:33:75.26:0,75,3415	1/1:13,0:9:17.84:431,18,0	1/1:14,0:14:5.60:58,6,0	0/1:79,0:64:58.45:1001,0,58	0/0:32,0:31:60.21:0,60,2701	0/0:20,0:20:48.16:0,48,2482	0/0:56,0:57:93.32:0,93,4638	0/0:41,0:41:69.92:0,70,3726	0/1:19,0:20:99:878,0,253	1/1:13,0:13:12.51:450,13,0	1/1:4,0:4:6.39:84,6,0
chr10	91015614	.	A	AT	453.95	PASS	AB=0.880;AC=9;AF=0.161;AN=56;BaseQRankSum=5.264;DP=957;FS=14.352;HRun=0;HaplotypeScore=193.1154;InbreedingCoeff=-0.1939;MQ=49.14;MQ0=24;MQRankSum=1.392;QD=2.04;ReadPosRankSum=-2.043;VQSLOD=1.7462;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:55:99:0,154,2133	0/0:11,0:11:33.11:0,33,460	0/0:26,0:5:15.04:0,15,190	0/0:55,0:18:42.13:0,42,548	0/1:17,3:20:71.35:78,0,71	0/0:32,1:32:52.41:0,52,715	0/0:66,0:59:96.04:0,96,1264	0/0:39,0:32:89.10:0,89,1084	0/1:20,2:22:97.02:97,0,210	0/0:56,0:56:99:0,157,2140	0/0:30,0:28:51.17:0,51,709	0/1:12,4:16:99:113,0,259	0/0:42,0:42:95.77:0,96,1272	0/1:22,6:26:38.98:39,0,188	0/0:42,0:40:99:0,108,1476	0/0:45,0:45:76.12:0,76,1035	0/0:46,0:45:99:0,122,1671	0/0:33,0:33:87.14:0,87,1142	0/1:13,0:8:13.17:13,0,227	0/1:13,1:14:31.47:31,0,96	0/1:66,12:61:72.82:73,0,686	0/0:33,0:32:66.19:0,66,886	0/0:20,0:20:51.17:0,51,713	0/0:56,0:56:96.31:0,96,1341	0/0:41,0:41:87.26:0,87,1213	0/1:17,1:17:51.64:52,0,424	0/1:9,4:13:98.67:99,0,145	0/0:4,0:4:9.03:0,9,124
chr10	91015615	.	C	CG	463.37	PASS	AB=0.963;AC=9;AF=0.161;AN=56;BaseQRankSum=5.907;DP=952;FS=20.773;HRun=0;HaplotypeScore=192.5523;InbreedingCoeff=-0.1953;MQ=47.86;MQ0=24;MQRankSum=0.114;QD=2.12;ReadPosRankSum=-1.506;VQSLOD=1.1327;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:56:99:0,154,2135	0/0:12,0:12:33.11:0,33,459	0/0:23,0:3:9.01:0,9,107	0/0:53,0:17:42.09:0,42,548	0/1:19,0:20:70.44:78,0,70	0/0:33,0:32:52.41:0,52,714	0/0:65,0:58:92.75:0,93,1231	0/0:38,0:31:86.81:0,87,1058	0/1:14,9:23:99:102,0,209	0/0:55,0:55:99:0,159,2162	0/0:30,0:28:54.17:0,54,732	0/1:14,0:14:91.04:91,0,258	0/0:41,0:41:94.83:0,95,1270	0/1:28,0:26:28.31:28,0,190	0/0:41,1:40:99:0,102,1443	0/0:44,0:44:76.18:0,76,1034	0/0:49,0:48:99:0,119,1636	0/0:33,0:33:87.11:0,87,1154	0/1:13,0:8:11.02:11,0,214	0/1:13,0:13:35.55:36,0,74	0/1:77,0:60:97.36:97,0,621	0/0:34,0:33:66.19:0,66,887	0/0:20,0:20:51.17:0,51,713	0/0:56,0:56:96.29:0,96,1323	0/0:41,0:41:87.24:0,87,1211	0/1:18,0:18:51.72:52,0,402	0/1:13,0:13:99:109,0,145	0/0:4,0:4:9.03:0,9,123
chr10	91015621	.	C	CG	1997.95	PASS	AB=0.707;AC=13;AF=0.232;AN=56;BaseQRankSum=6.190;DP=896;FS=1.136;HRun=0;HaplotypeScore=174.4321;InbreedingCoeff=-0.0049;MQ=49.39;MQ0=23;MQRankSum=0.528;QD=9.21;ReadPosRankSum=-3.831;VQSLOD=2.9601;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:58:99:0,150,2058	0/0:15,0:15:45.12:0,45,590	0/0:21,0:6:14.85:0,15,140	0/0:42,0:11:27.09:0,27,377	1/1:18,1:19:2.66:47,3,0	0/0:32,0:31:51.12:0,51,689	0/0:62,0:55:89.88:0,90,1178	0/1:14,16:24:99:613,0,143	0/1:13,5:19:75.09:168,0,75	0/0:58,0:58:99:0,169,2263	0/0:29,0:27:54.18:0,54,749	0/1:7,6:13:39.76:192,0,40	0/0:41,0:41:88.95:0,89,1211	0/1:14,9:23:34.69:125,0,35	0/0:42,0:41:99:0,105,1439	0/0:44,0:44:75.24:0,75,1031	0/0:50,0:49:99:0,128,1759	0/0:30,0:30:75.14:0,75,1018	0/1:8,5:8:49.67:206,0,50	0/1:3,6:10:15.48:42,0,15	0/1:35,22:50:99:431,0,99	0/0:35,0:34:72.23:0,72,989	0/0:20,0:20:51.17:0,51,713	0/0:57,0:56:93.31:0,93,1301	0/0:40,0:40:87.29:0,87,1208	0/1:13,4:16:99:196,0,194	0/1:4,5:9:28.33:84,0,28	1/1:0,0:1:3.01:46,3,0
chr10	91015696	.	GAC	G	4549.92	PASS	AB=0.822;AC=24;AF=0.429;AN=56;BaseQRankSum=3.564;DP=916;FS=6.474;HRun=0;HaplotypeScore=185.0522;InbreedingCoeff=0.6875;MQ=51.91;MQ0=29;MQRankSum=0.023;QD=12.13;ReadPosRankSum=2.431;VQSLOD=4.3426;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:69.80:0,70,1237	0/1:13,1:14:5.33:5,0,356	0/0:36,0:5:12.03:0,12,142	0/0:53,0:9:11.75:0,12,175	0/0:19,0:17:20.43:0,20,300	1/1:4,12:16:15.04:183,15,0	1/1:18,17:35:10.63:309,11,0	0/0:45,0:38:72.17:0,72,1071	0/0:19,1:20:9.49:0,9,477	1/1:19,18:36:82.58:899,83,0	1/1:4,10:13:8.68:109,9,0	0/0:30,0:30:63.69:0,64,1001	1/1:15,12:28:43.60:511,44,0	0/0:35,1:35:66.21:0,66,1031	0/0:38,0:37:76.75:0,77,1139	1/1:16,15:32:35.66:384,36,0	0/1:50,4:54:99:117,0,1347	1/1:9,16:25:57.07:659,57,0	0/0:22,0:16:23.87:0,24,338	0/0:22,0:21:42.11:0,42,624	0/0:104,9:107:99:0,167,2638	1/1:14,12:27:20.80:226,21,0	1/1:10,6:16:15.05:181,15,0	1/1:16,31:46:60.16:713,60,0	0/1:9,10:19:25.12:201,0,25	0/0:37,2:34:75.13:0,75,1101	0/0:22,0:23:53.95:0,54,723	0/1:5,2:7:52.23:52,0,196
chr10	91015727	.	GAC	G	12160.23	PASS	AB=0.910;AC=46;AF=0.821;AN=56;BaseQRankSum=6.994;DP=933;FS=1.281;HRun=0;HaplotypeScore=176.3771;InbreedingCoeff=0.7285;MQ=52.56;MQ0=42;MQRankSum=-0.504;QD=16.61;ReadPosRankSum=1.024;VQSLOD=5.0776;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,1:46:68.24:0,68,1442	0/1:8,1:9:9.26:9,0,333	0/0:59,0:6:9.38:0,9,48	0/0:58,0:12:15.92:0,16,166	1/1:2,18:19:33.10:400,33,0	1/1:6,16:21:27.08:324,27,0	1/1:9,19:29:39.48:515,39,0	1/1:31,9:37:54.97:676,55,0	1/1:7,16:25:56.69:633,57,0	1/1:17,36:50:99:1271,108,0	1/1:5,7:11:5.67:72,6,0	1/1:5,23:29:50.99:596,51,0	1/1:9,14:24:43.78:487,44,0	1/1:6,29:35:54:629,54,0	0/0:38,0:38:57.61:0,58,1345	1/1:8,18:25:27.09:412,27,0	0/1:42,3:46:72.04:72,0,1227	1/1:13,10:23:22.35:396,22,0	1/1:9,11:14:24.27:325,24,0	1/1:12,7:20:32.67:353,33,0	1/1:58,36:85:99:1526,129,0	1/1:10,15:25:30.06:330,30,0	1/1:6,17:21:24.07:291,24,0	1/1:26,16:43:28.19:556,28,0	1/1:10,14:24:26.52:305,27,0	1/1:7,42:46:99:1280,111,0	1/1:6,22:28:27.31:492,27,0	1/1:1,6:9:20.73:210,21,0
chr10	91015798	.	TTGTG	T	3134.51	PASS	AB=0.916;AC=37;AF=0.771;AN=48;BaseQRankSum=5.122;DP=622;FS=2.602;HRun=0;HaplotypeScore=145.5946;InbreedingCoeff=0.4670;MQ=64.10;MQ0=11;MQRankSum=-1.958;QD=7.19;ReadPosRankSum=-0.208;VQSLOD=2.3198;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:18.04:0,18,312	0/1:9,1:10:31.28:31,0,211	./.	./.	1/1:22,0:26:12.19:77,12,0	1/1:21,1:20:9.03:139,9,0	0/1:25,5:31:23:307,0,23	./.	1/1:22,0:28:17.86:154,18,0	0/0:22,0:20:0.47:0,0,1	1/1:10,1:10:8.94:86,9,0	1/1:14,0:17:12.01:112,12,0	1/1:15,2:17:15.03:208,15,0	1/1:17,0:20:9.01:84,9,0	0/0:30,0:32:29.84:0,30,528	1/1:23,9:32:42.08:601,42,0	0/0:29,0:30:32.08:0,32,699	1/1:19,6:26:20.15:416,20,0	./.	1/1:21,0:23:6.01:56,6,0	1/1:29,0:29:3:27,3,0	1/1:16,1:17:6.02:91,6,0	1/1:15,2:16:12.03:164,12,0	1/1:28,11:39:39.13:584,39,0	1/1:15,1:16:6.02:92,6,0	0/1:29,0:28:0:0,0,0	1/1:16,0:16:2.99:23,3,0	1/1:4,0:5:3:28,3,0
chr10	91018095	.	G	GAA	10095.73	PASS	AB=0.577;AC=43;AF=0.768;AN=56;BaseQRankSum=3.588;DP=617;FS=8.577;HRun=10;HaplotypeScore=105.7513;InbreedingCoeff=0.8403;MQ=65.64;MQ0=9;MQRankSum=-4.825;QD=23.00;ReadPosRankSum=-1.121;VQSLOD=3.5520;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:93.09:0,93,945	0/0:10,0:10:17.92:0,18,181	0/0:32,0:16:24.38:0,24,155	0/0:27,0:13:19.41:0,19,134	1/1:5,12:22:34.43:500,34,0	1/1:5,12:18:3.98:335,4,0	1/1:9,21:30:20.63:685,21,0	1/1:12,15:29:61.34:791,61,0	1/1:0,9:11:21.06:296,21,0	1/1:8,15:25:48.14:689,48,0	1/1:4,13:20:34.97:457,35,0	1/1:9,14:27:38.10:493,38,0	0/1:4,11:14:27.95:346,0,28	1/1:5,8:13:12.04:179,12,0	0/0:29,0:29:52:0,52,570	1/1:2,13:16:32.60:456,33,0	0/0:35,0:35:96.13:0,96,955	1/1:2,16:19:39.13:581,39,0	1/1:7,7:19:41.03:460,41,0	1/1:5,15:24:46.42:528,46,0	1/1:4,7:12:18.06:261,18,0	1/1:8,11:21:32.50:381,33,0	1/1:5,6:13:9.03:135,9,0	1/1:4,22:27:41.63:590,42,0	1/1:8,13:22:31.87:405,32,0	1/1:10,17:27:59.65:802,60,0	1/1:3,17:22:47.59:626,48,0	1/1:0,2:3:8.52:98,9,0
chr10	91019651	.	G	GGTGTGTGTGT	5770.32	PASS	AB=1.000;AC=39;AF=0.750;AN=52;BaseQRankSum=1.046;DP=521;FS=8.600;HRun=0;HaplotypeScore=170.2497;InbreedingCoeff=0.5578;MQ=65.54;MQ0=16;MQRankSum=-1.864;QD=15.15;ReadPosRankSum=-0.370;VQSLOD=3.2254;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:38.72:0,39,1120	0/0:8,0:8:8.96:0,9,220	./.	./.	1/1:14,0:14:5.32:74,5,0	1/1:20,0:20:17.41:458,17,0	1/1:31,0:30:18.97:328,19,0	1/1:30,0:30:24.05:581,24,0	1/1:18,0:16:12.50:243,12,0	1/1:15,0:15:23.57:489,24,0	0/0:11,0:11:1.25:0,1,3	1/1:12,0:13:3.46:25,3,0	1/1:9,0:8:11.25:178,11,0	1/1:21,0:21:11.78:366,12,0	0/0:13,0:12:11.60:0,12,305	1/1:14,0:12:6.02:118,6,0	0/0:25,0:23:40.29:0,40,989	0/1:18,0:18:22.67:356,0,23	1/1:20,0:20:18.88:417,19,0	1/1:20,0:18:12.48:193,12,0	1/1:19,6:21:3.48:50,3,0	1/1:16,0:15:2.60:16,3,0	1/1:12,0:11:3.48:50,3,0	1/1:16,0:14:11.52:221,12,0	0/1:15,0:15:0.03:0,0,0	1/1:26,0:25:42.22:870,42,0	1/1:16,0:17:22.80:642,23,0	0/1:10,0:10:0.92:94,0,1
chr10	91019687	.	TGAGAGAGAGAGA	T	1493.56	PASS	AB=0.868;AC=12;AF=0.240;AN=50;BaseQRankSum=0.275;DP=449;FS=67.446;HRun=0;HaplotypeScore=172.4727;InbreedingCoeff=-0.0034;MQ=41.04;MQ0=28;MQRankSum=-3.306;QD=8.07;ReadPosRankSum=-0.976;VQSLOD=0.3531;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:43.33:0,43,1435	0/0:8,0:8:0.89:0,1,2	./.	./.	./.	0/1:21,0:21:20.14:20,0,118	0/1:25,0:21:8.79:9,0,14	1/1:18,2:20:5.98:112,6,0	0/0:14,0:13:6.49:0,6,106	0/0:14,0:15:17.42:0,17,214	0/0:5,0:5:6.02:0,6,160	0/0:7,0:12:0.47:0,0,1	0/0:7,0:6:7.57:0,8,147	0/1:14,1:19:59.31:91,0,59	0/0:16,0:15:18.06:0,18,885	0/0:10,0:10:20.03:0,20,110	0/0:27,0:24:45.14:0,45,1716	0/0:16,0:18:16.44:0,16,236	0/1:11,0:13:20.39:443,0,20	1/1:13,4:16:2.44:98,2,0	0/0:20,0:16:0:0,0,0	0/0:15,0:14:3.01:0,3,96	0/0:10,0:9:4.82:0,5,76	0/0:25,0:24:5.04:0,5,287	0/1:15,0:16:9.38:9,0,73	0/1:18,2:24:50.93:560,0,51	0/1:13,2:14:86.38:87,0,86	0/1:7,1:9:50.58:199,0,51
chr10	91019952	.	T	TC	1948.36	PASS	AB=0.583;AC=18;AF=0.321;AN=56;BaseQRankSum=-5.854;DP=474;FS=27.977;HRun=10;HaplotypeScore=61.9357;InbreedingCoeff=0.6966;MQ=85.18;MQ0=1;MQRankSum=-0.518;QD=11.60;ReadPosRankSum=-0.204;VQSLOD=0.9026;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:30:57.98:0,58,454	0/0:3,0:3:5.94:0,6,40	0/0:26,0:24:16.86:0,17,209	0/0:20,0:16:20.84:0,21,158	0/0:12,0:12:29.93:0,30,240	1/1:5,11:16:12.02:127,12,0	0/1:7,14:21:25.19:168,0,25	0/0:20,0:20:23.94:0,24,194	0/0:15,0:15:35.90:0,36,288	1/1:5,10:15:29.86:294,30,0	1/1:0,8:8:15.04:160,15,0	0/0:22,0:22:53.91:0,54,443	0/1:3,14:17:0.56:190,0,1	0/0:19,0:19:47.91:0,48,390	0/0:17,0:17:47.84:0,48,377	1/1:1,14:15:16.28:162,16,0	0/0:27,0:27:59.87:0,60,489	0/1:2,11:13:0.57:200,0,1	0/0:12,0:12:20.96:0,21,172	0/0:11,0:12:31.64:0,32,225	0/0:19,2:22:17.87:0,18,328	1/1:0,2:2:2.92:17,3,0	0/1:4,4:9:21.76:107,0,22	1/1:6,32:38:50.51:524,51,0	1/1:4,10:14:18.05:192,18,0	0/0:14,0:14:35.82:0,36,279	0/0:23,0:23:53.70:0,54,428	0/0:10,0:11:29:0,29,227
chr10	91020215	.	GA	G	3715.79	PASS	AB=0.738;AC=42;AF=0.750;AN=56;BaseQRankSum=1.102;DP=490;FS=14.375;HRun=14;HaplotypeScore=56.3057;InbreedingCoeff=0.4375;MQ=58.83;MQ0=8;MQRankSum=2.261;QD=9.15;ReadPosRankSum=0.154;VQSLOD=1.1758;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,1:30:38.70:0,39,465	0/0:6,0:5:9.47:0,9,82	0/1:5,0:3:14.87:15,0,15	0/1:5,1:3:2.28:2,0,18	1/1:12,6:19:27.83:173,28,0	1/1:6,14:20:16.06:137,16,0	1/1:11,14:24:37.54:252,38,0	1/1:19,14:35:23.10:233,23,0	1/1:6,12:18:15.59:205,16,0	1/1:3,11:16:30.29:195,30,0	0/1:12,9:21:0.38:223,0,0	1/1:5,12:17:29.70:205,30,0	0/1:12,5:17:62.94:93,0,63	1/1:8,8:16:19.55:129,20,0	0/0:19,0:19:0.46:0,0,238	1/1:5,14:20:10.78:187,11,0	0/0:26,1:28:34.19:0,34,429	1/1:6,11:17:31.71:211,32,0	1/1:2,18:21:51.39:333,51,0	1/1:6,5:10:14.85:102,15,0	1/1:4,11:15:23.80:164,24,0	1/1:2,7:11:16.89:109,17,0	0/1:4,11:15:4.12:120,0,4	1/1:3,13:19:20.97:120,21,0	1/1:5,5:12:24.54:142,25,0	1/1:5,13:18:10.63:193,11,0	0/1:6,10:18:45.96:100,0,46	1/1:4,4:9:12.74:73,13,0
chr10	91020974	.	T	TA	5208.27	PASS	AB=0.958;AC=24;AF=0.429;AN=56;BaseQRankSum=-7.065;DP=526;FS=1.658;HRun=9;HaplotypeScore=63.2059;InbreedingCoeff=0.8678;MQ=70.86;MQ0=0;MQRankSum=-2.183;QD=21.26;ReadPosRankSum=-2.365;VQSLOD=4.7623;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:56.91:0,57,483	0/0:7,0:7:21:0,21,182	0/1:15,0:11:17.33:17,0,64	0/0:15,0:10:9.93:0,10,53	1/1:4,21:25:60.12:645,60,0	0/0:16,0:16:44.99:0,45,390	0/0:22,1:23:17.89:0,18,379	1/1:5,28:33:63.97:871,64,0	1/1:5,12:17:27.07:298,27,0	0/0:19,0:19:47.94:0,48,409	0/0:10,0:10:17.96:0,18,156	1/1:3,16:19:39.06:417,39,0	0/0:24,0:24:62.94:0,63,536	1/1:2,15:17:30.08:331,30,0	0/0:26,0:26:53.96:0,54,465	0/0:17,0:17:38.99:0,39,338	0/0:43,0:43:99:0,105,891	0/0:18,0:18:47.93:0,48,409	1/1:5,13:18:39.11:430,39,0	1/1:3,14:17:39.07:418,39,0	1/1:2,17:19:39.11:430,39,0	0/0:6,0:7:16.99:0,17,136	0/1:10,1:11:3.09:3,0,204	0/0:16,0:16:35.99:0,36,312	0/0:14,0:14:38.97:0,39,332	1/1:5,16:22:51.10:536,51,0	1/1:6,14:20:42.01:447,42,0	1/1:0,12:12:33.09:364,33,0
chr10	91021358	.	TA	T	4647.32	PASS	AB=0.740;AC=44;AF=0.786;AN=56;BaseQRankSum=7.863;DP=472;FS=12.376;HRun=11;HaplotypeScore=63.4238;InbreedingCoeff=0.7880;MQ=54.69;MQ0=10;MQRankSum=-0.583;QD=11.83;ReadPosRankSum=0.784;VQSLOD=2.9231;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:32:47.48:0,47,685	0/1:9,1:10:0.61:1,0,189	0/0:3,0:2:3.01:0,3,32	0/0:4,0:4:11.97:0,12,101	1/1:6,23:28:62.90:517,63,0	1/1:6,0:15:20.37:59,20,0	1/1:2,0:12:18.33:53,18,0	1/1:3,21:26:60.02:461,60,0	1/1:1,17:18:44.95:369,45,0	1/1:3,0:22:38.69:112,39,0	1/1:5,0:13:18.33:53,18,0	1/1:3,12:15:35.83:295,36,0	1/1:1,0:15:28.52:82,29,0	1/1:2,8:10:20.97:172,21,0	0/0:17,1:18:29.49:0,29,516	1/1:2,0:15:22.39:65,22,0	0/0:19,1:20:26.49:0,26,486	1/1:3,1:20:26.07:96,26,0	1/1:9,25:33:59.29:612,59,0	1/1:5,19:26:49:381,49,0	1/1:0,10:10:29.97:246,30,0	1/1:0,0:5:8.10:23,8,0	1/1:2,0:19:28.05:82,28,0	0/1:2,0:8:10.06:17,0,10	1/1:3,0:17:28.52:82,29,0	1/1:5,16:22:49.97:400,50,0	1/1:1,12:13:29.97:246,30,0	1/1:2,9:10:26.96:222,27,0
chr10	91022443	.	TAAA	T	1920.53	PASS	AB=0.671;AC=18;AF=0.321;AN=56;BaseQRankSum=0.503;DP=513;FS=2.859;HRun=17;HaplotypeScore=84.5663;InbreedingCoeff=0.7690;MQ=77.82;MQ0=3;MQRankSum=-1.040;QD=10.97;ReadPosRankSum=3.031;VQSLOD=0.6184;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:59.87:0,60,805	0/0:8,0:11:33:0,33,420	0/0:40,0:21:19.32:0,19,261	0/0:25,0:18:13.72:0,14,267	0/1:6,6:12:14.66:80,0,15	0/0:9,0:10:20.93:0,21,230	0/0:16,0:19:43.32:0,43,613	1/1:12,11:24:3.44:213,3,0	1/1:3,16:19:28.29:305,28,0	0/0:20,0:22:44.13:0,44,595	0/0:7,0:11:20.95:0,21,244	1/1:5,10:16:26.87:262,27,0	0/0:13,0:15:37.91:0,38,531	1/1:8,9:17:11.86:121,12,0	0/0:24,0:24:56.18:0,56,809	0/0:11,0:14:31.29:0,31,421	0/0:29,0:33:72.19:0,72,902	0/0:18,0:18:45.13:0,45,697	1/1:10,6:17:32.62:294,33,0	1/1:7,5:13:15.04:163,15,0	0/0:4,0:7:4.05:0,4,9	0/0:13,0:13:24.04:0,24,330	0/0:16,0:20:54.12:0,54,803	0/0:9,0:10:26.57:0,27,394	0/0:18,0:18:9.40:0,9,508	0/1:14,11:27:30.29:294,0,30	1/1:6,11:18:19.10:212,19,0	1/1:7,5:12:18.70:178,19,0
chr10	91022458	.	AAAC	A	451.85	PASS	AB=0.980;AC=11;AF=0.196;AN=56;BaseQRankSum=7.889;DP=504;FS=8.511;HRun=0;HaplotypeScore=90.2743;InbreedingCoeff=-0.0496;MQ=73.72;MQ0=3;MQRankSum=-0.834;QD=2.79;ReadPosRankSum=3.266;VQSLOD=0.7907;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:62.40:0,62,770	0/0:13,0:13:28.18:0,28,408	0/0:44,0:21:29.18:0,29,413	0/0:26,0:17:12.79:0,13,191	0/1:11,0:11:13.70:14,0,73	0/0:8,0:9:16.40:0,16,169	0/0:16,0:16:47.53:0,48,570	0/1:21,0:21:23.44:23,0,149	0/1:22,0:22:44.32:44,0,92	0/0:21,0:21:51.98:0,52,634	0/0:10,0:10:4.01:0,4,173	0/1:15,1:16:38.13:84,0,38	0/0:16,0:16:25.21:0,25,476	0/1:12,0:12:17.13:17,0,60	0/0:21,0:21:39.08:0,39,680	0/0:13,0:13:34.49:0,34,355	0/0:35,0:34:51.32:0,51,856	0/0:22,0:22:60.94:0,61,659	0/1:21,1:22:79.45:79,0,107	0/1:12,0:12:37.25:50,0,37	0/0:10,0:10:18.40:0,18,112	0/0:10,0:10:22.49:0,22,266	0/0:20,0:20:54.83:0,55,770	0/0:14,0:14:40.26:0,40,451	0/0:15,0:15:2.41:0,2,417	0/1:22,2:24:95.18:116,0,95	0/1:15,0:15:21.09:101,0,21	1/1:7,0:7:16.66:74,17,0
chr10	91022703	.	G	GC	6656.78	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-3.548;DP=483;FS=1.422;HRun=8;HaplotypeScore=68.1612;InbreedingCoeff=0.9545;MQ=75.15;MQ0=0;MQRankSum=-2.180;QD=17.99;ReadPosRankSum=0.394;VQSLOD=4.7541;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:84.03:0,84,768	0/0:9,0:9:27.01:0,27,247	0/0:10,0:10:11.71:0,12,179	0/0:10,0:10:20.36:0,20,165	1/1:2,1:9:8.69:64,9,0	1/1:0,20:20:54.16:623,54,0	1/1:3,19:22:54.16:623,54,0	1/1:8,0:17:21.80:125,22,0	1/1:1,0:21:28.88:145,29,0	1/1:2,12:14:36.11:415,36,0	1/1:2,9:11:27.04:297,27,0	1/1:5,1:13:12.64:61,13,0	1/1:0,19:19:57.17:658,57,0	1/1:7,0:16:28.78:153,29,0	0/0:21,0:21:60.03:0,60,549	1/1:2,12:15:23.90:257,24,0	0/0:28,0:28:78.04:0,78,714	1/1:2,22:24:60.18:692,60,0	1/1:5,0:19:37.26:204,37,0	1/1:5,0:15:11.16:63,11,0	1/1:10,0:27:29.73:150,30,0	1/1:1,12:13:23.86:277,24,0	1/1:4,10:14:36.09:406,36,0	1/1:6,29:35:78.22:889,78,0	1/1:2,8:10:21.06:242,21,0	1/1:8,6:17:20.03:150,20,0	1/1:2,0:10:17.49:96,17,0	1/1:2,0:9:11.60:67,12,0
chr10	91025296	.	T	TA	1533.32	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=7.266;DP=587;FS=0.819;HRun=10;HaplotypeScore=105.9127;InbreedingCoeff=0.4115;MQ=84.99;MQ0=0;MQRankSum=-5.569;QD=3.92;ReadPosRankSum=-3.700;VQSLOD=0.1627;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:71.89:0,72,587	0/1:5,0:6:17.92:18,0,62	0/1:41,0:29:1.07:1,0,176	0/0:32,0:28:3.34:0,3,113	1/1:13,0:13:23.11:129,23,0	0/1:21,0:20:28.69:29,0,52	0/1:23,0:23:10.50:10,0,64	1/1:22,0:22:22.81:118,23,0	1/1:16,0:16:20.39:108,20,0	0/1:21,0:21:5.06:5,0,50	0/1:21,0:21:26.42:26,0,28	1/1:20,0:20:19.89:98,20,0	0/1:12,0:12:3.36:3,0,28	1/1:22,0:23:40:206,40,0	0/0:27,0:27:62.81:0,63,503	0/1:12,0:12:5.22:5,0,31	0/0:27,0:28:61.86:0,62,484	0/0:35,0:35:17.64:0,18,154	1/1:7,0:7:14.47:84,14,0	1/1:17,0:17:25.57:126,26,0	1/1:16,0:16:17.32:96,17,0	1/1:6,8:14:19.36:226,19,0	0/0:21,0:21:22.89:0,23,76	0/1:28,0:28:8.14:8,0,78	0/0:26,0:26:41.11:0,41,165	1/1:21,0:21:34.24:173,34,0	1/1:23,0:24:42.76:216,43,0	1/1:13,0:13:8.52:42,9,0
chr10	91025306	.	A	AAAAAG	5993.02	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-5.517;DP=582;FS=2.166;HRun=0;HaplotypeScore=148.8551;InbreedingCoeff=0.9091;MQ=92.06;MQ0=0;MQRankSum=-4.886;QD=29.09;ReadPosRankSum=-2.890;VQSLOD=4.0845;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.21:0,84,1515	0/0:7,0:7:9.86:0,10,235	0/0:43,0:33:39.76:0,40,722	0/0:40,0:36:54.96:0,55,664	1/1:0,0:13:32.81:431,33,0	0/0:16,0:16:43.45:0,43,451	0/0:21,0:21:33.78:0,34,563	1/1:2,0:19:38.97:542,39,0	1/1:0,0:19:23.90:457,24,0	0/0:22,0:22:60.30:0,60,537	0/0:17,0:17:32.07:0,32,331	1/1:0,0:20:21.02:420,21,0	0/0:13,0:13:19.48:0,19,281	1/1:1,0:23:42.10:743,42,0	0/0:22,0:22:66.12:0,66,1237	0/0:10,0:11:32.38:0,32,306	0/0:28,0:28:75.14:0,75,1249	0/0:32,0:34:99:0,101,1055	1/1:0,0:19:53.33:657,53,0	1/1:1,1:14:30.10:625,30,0	1/1:2,0:20:18.02:308,18,0	0/1:13,0:13:17.81:18,0,55	0/0:18,0:18:45.43:0,45,496	0/0:24,0:28:82.79:0,83,806	0/0:23,0:24:62.85:0,63,724	1/1:1,0:17:37.12:730,37,0	1/1:1,1:23:45:883,45,0	1/1:0,0:6:9.03:180,9,0
chr10	91025311	.	G	GA	156.67	PASS	AB=0.965;AC=7;AF=0.125;AN=56;BaseQRankSum=10.054;DP=574;FS=3.462;HRun=0;HaplotypeScore=127.6849;InbreedingCoeff=0.1663;MQ=91.53;MQ0=0;MQRankSum=-3.508;QD=1.06;ReadPosRankSum=-2.644;VQSLOD=1.7067;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1297	0/0:8,0:8:14.90:0,15,229	0/1:40,1:31:80.84:81,0,497	0/1:34,5:36:99:114,0,461	0/1:11,0:11:1.21:1,0,26	0/0:15,0:14:43.33:0,43,529	0/0:21,0:21:63.06:0,63,774	0/0:20,0:20:11.70:0,12,165	0/0:19,0:19:15.17:0,15,89	0/0:23,0:23:62.83:0,63,700	0/0:14,0:14:33.03:0,33,408	0/0:17,0:17:6.46:0,6,35	0/0:15,0:15:42.39:0,42,464	0/0:21,0:21:6.72:0,7,34	0/0:22,0:22:66.01:0,66,882	0/0:12,0:12:35.06:0,35,381	0/0:29,0:29:78.15:0,78,978	0/0:34,0:34:92.65:0,93,1123	0/1:20,0:20:4.78:5,0,57	0/1:13,0:13:5.38:49,0,5	0/0:20,0:20:12.10:0,12,87	0/0:15,0:15:35.53:0,36,271	0/0:19,0:19:51.12:0,51,641	0/0:29,0:29:86.23:0,86,912	0/0:21,0:21:56.93:0,57,698	0/0:15,0:15:0.14:0,0,22	1/1:22,0:22:7.32:25,7,0	0/0:4,0:4:5.35:0,5,29
chr10	91025567	.	T	TC	7407.92	PASS	AB=0.658;AC=48;AF=0.857;AN=56;BaseQRankSum=-5.986;DP=576;FS=1.810;HRun=6;HaplotypeScore=223.9704;InbreedingCoeff=0.1124;MQ=57.52;MQ0=1;MQRankSum=2.163;QD=13.13;ReadPosRankSum=-0.042;VQSLOD=2.1094;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,24:33:68.02:565,68,0	1/1:2,6:8:17.97:153,18,0	1/1:10,0:10:22.79:220,23,0	0/1:7,1:8:2.41:80,0,2	1/1:15,0:15:2.90:16,3,0	1/1:7,12:19:42.01:373,42,0	1/1:8,32:40:92.96:798,93,0	0/0:8,0:12:5.44:0,5,12	0/1:8,0:24:2.45:46,0,2	1/1:3,19:22:62.65:533,63,0	1/1:1,14:15:35.18:274,35,0	1/1:7,0:26:3.93:45,4,0	1/1:5,17:22:56.93:482,57,0	0/1:4,0:19:7.60:13,0,8	1/1:6,23:29:73.80:636,74,0	1/1:5,25:30:84.01:745,84,0	1/1:7,11:18:36:317,36,0	1/1:7,16:22:48.07:469,48,0	0/1:8,0:15:3.33:20,0,3	1/1:2,0:17:0.72:34,1,0	0/1:16,0:46:1.41:139,0,1	1/1:1,11:12:29.87:244,30,0	1/1:4,15:19:43.07:327,43,0	1/1:4,14:17:35.88:290,36,0	1/1:5,16:21:56.92:492,57,0	0/1:8,1:21:1.96:39,0,2	1/1:6,0:19:7.38:24,7,0	1/1:2,0:13:9.01:33,9,0
chr10	91027266	.	TC	T	8098.68	PASS	AB=0.563;AC=43;AF=0.768;AN=56;BaseQRankSum=5.653;DP=484;FS=3.836;HRun=9;HaplotypeScore=53.3316;InbreedingCoeff=0.8956;MQ=81.03;MQ0=0;MQRankSum=-2.346;QD=22.25;ReadPosRankSum=2.936;VQSLOD=5.8168;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.28:0,93,1072	0/0:5,0:5:15.04:0,15,173	0/0:24,0:22:35.32:0,35,343	0/0:16,0:15:27.10:0,27,245	1/1:2,16:18:51.03:466,51,0	1/1:0,15:15:42.02:384,42,0	1/1:4,20:24:52.58:471,53,0	1/1:1,17:18:51.03:466,51,0	1/1:4,13:17:33.01:301,33,0	1/1:1,17:18:53.99:482,54,0	1/1:1,14:15:42.02:384,42,0	1/1:2,15:17:45.02:411,45,0	0/1:2,7:9:13.60:144,0,14	1/1:1,11:12:24.01:219,24,0	0/0:16,0:16:20.85:0,21,482	1/1:4,19:23:60.03:549,60,0	0/0:25,0:25:72.17:0,72,815	1/1:2,15:17:39.02:357,39,0	1/1:5,17:22:51.02:467,51,0	1/1:1,12:14:35.05:308,35,0	1/1:6,14:20:39.02:357,39,0	1/1:1,14:15:39.02:355,39,0	1/1:2,10:12:30.02:274,30,0	1/1:3,15:18:42.01:384,42,0	1/1:0,7:7:15.01:137,15,0	1/1:3,21:24:63.03:576,63,0	1/1:1,18:19:42.02:384,42,0	1/1:0,10:10:24.01:220,24,0
chr10	91027646	.	TCA	T	487.22	PASS	AB=0.976;AC=21;AF=0.404;AN=52;BaseQRankSum=2.622;DP=587;FS=4.772;HRun=0;HaplotypeScore=120.3598;InbreedingCoeff=0.0656;MQ=64.63;MQ0=14;MQRankSum=-0.040;QD=1.37;ReadPosRankSum=0.511;VQSLOD=2.2556;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:33.98:0,34,426	0/0:3,0:3:0.89:0,1,2	./.	./.	0/1:19,0:18:5.54:58,0,6	0/0:14,0:12:8.82:0,9,78	0/1:37,0:37:22.02:22,0,106	0/1:24,0:23:1.40:1,0,26	1/1:12,0:12:2.01:7,2,0	0/0:18,0:18:17.97:0,18,185	0/0:13,0:13:6.48:0,6,63	1/1:21,0:20:12.63:65,13,0	0/1:16,0:16:19.83:20,0,91	0/1:15,0:15:15.63:19,0,16	0/1:17,1:18:2.67:3,0,328	0/0:14,0:14:5.28:0,5,31	0/1:18,3:21:98.97:99,0,261	0/0:22,0:22:6.09:0,6,230	1/1:16,0:16:15.73:96,16,0	1/1:18,0:18:8.21:45,8,0	0/1:42,0:38:24.16:24,0,77	0/0:22,0:21:17.51:0,18,156	0/0:15,0:15:0.10:0,0,224	0/1:44,0:43:7.49:7,0,104	0/0:14,0:13:13.79:0,14,119	0/1:27,0:27:57.94:70,0,58	1/1:15,0:14:7.09:103,7,0	0/1:9,0:9:1.35:1,0,62
chr10	91027682	.	A	ACG	1859.64	PASS	AB=0.878;AC=15;AF=0.278;AN=54;BaseQRankSum=-2.405;DP=604;FS=7.525;HRun=0;HaplotypeScore=148.9951;InbreedingCoeff=0.2576;MQ=42.24;MQ0=38;MQRankSum=-2.182;QD=8.41;ReadPosRankSum=1.001;VQSLOD=2.7938;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:44:99:0,107,1055	0/0:7,0:7:13.46:0,13,94	./.	0/0:5,0:1:3.01:0,3,41	1/1:12,6:18:13.70:182,14,0	0/0:20,0:17:17.64:0,18,150	0/0:41,0:39:27.43:0,27,248	1/1:16,1:15:0.99:184,1,0	1/1:9,3:12:10.99:83,11,0	0/0:22,0:19:31.04:0,31,302	0/0:12,0:11:9.02:0,9,101	0/1:24,1:23:80.46:297,0,80	0/0:20,0:19:32.37:0,32,289	0/1:10,2:12:14.80:117,0,15	0/0:25,0:23:57.01:0,57,616	0/0:26,0:24:6.48:0,6,59	0/0:30,0:28:80.35:0,80,760	0/0:23,0:22:42.82:0,43,422	0/1:6,5:10:7.45:247,0,7	1/1:8,4:12:14.83:156,15,0	0/1:44,7:34:29.05:206,0,29	0/0:20,0:19:23.78:0,24,263	0/0:19,0:16:29.80:0,30,326	0/0:43,0:42:14.88:0,15,150	0/0:19,0:18:16.20:0,16,129	0/1:23,4:26:54.86:355,0,55	0/1:21,1:21:99:148,0,115	0/1:13,1:10:34.70:52,0,35
chr10	91027688	.	ACG	A	2695.41	PASS	AB=0.950;AC=33;AF=0.635;AN=52;BaseQRankSum=6.280;DP=592;FS=16.713;HRun=0;HaplotypeScore=156.0634;InbreedingCoeff=0.1013;MQ=41.52;MQ0=38;MQRankSum=-4.081;QD=5.56;ReadPosRankSum=-5.382;VQSLOD=0.0961;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:43:73.23:0,73,849	0/0:6,0:6:4.91:0,5,46	./.	./.	1/1:17,0:17:12.57:133,13,0	0/1:18,0:15:8.32:33,0,8	0/1:36,2:36:5.91:123,0,6	1/1:15,0:13:10.71:72,11,0	1/1:12,0:12:9:79,9,0	0/1:22,0:19:7.88:149,0,8	0/1:10,1:10:5.09:17,0,5	1/1:22,2:22:26.94:273,27,0	0/1:19,1:19:1.29:167,0,1	1/1:16,0:16:14.64:134,15,0	0/0:25,0:23:36.81:0,37,602	1/1:28,1:27:8.03:55,8,0	0/0:29,0:27:14.48:0,14,559	0/1:20,2:21:73.79:97,0,74	1/1:12,0:11:27.36:274,27,0	1/1:12,1:13:11.77:143,12,0	0/1:48,3:33:20.11:152,0,20	0/1:18,1:18:16.28:16,0,17	0/1:16,2:14:28.11:28,0,80	0/1:40,4:43:28.69:46,0,29	0/1:17,0:16:13.18:38,0,13	1/1:27,1:27:30.96:389,31,0	1/1:23,0:22:29.38:374,29,0	1/1:16,0:12:9.41:72,9,0
chr10	91027704	.	GCACGCACACACACGCACACA	G	5483.02	PASS	AB=1.000;AC=43;AF=0.796;AN=54;BaseQRankSum=10.100;DP=538;FS=3.270;HRun=0;HaplotypeScore=211.4849;InbreedingCoeff=0.6139;MQ=41.16;MQ0=47;MQRankSum=-6.205;QD=13.64;ReadPosRankSum=-3.999;VQSLOD=2.7895;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:36:81.57:0,82,3568	0/0:7,0:7:8.63:0,9,470	./.	0/0:20,0:1:2.98:0,3,22	1/1:10,0:10:7.38:118,7,0	1/1:21,0:19:11.22:275,11,0	1/1:35,0:33:5.13:118,5,0	1/1:4,0:3:9.01:91,9,0	1/1:11,0:11:14.40:152,14,0	1/1:20,0:16:42.01:867,42,0	1/1:7,0:6:5.99:50,6,0	1/1:22,0:20:13.25:206,13,0	1/1:18,0:16:26.55:559,27,0	1/1:16,0:16:9.59:223,10,0	0/0:28,0:26:69.22:0,69,2651	1/1:3,20:21:1.84:166,2,0	0/0:31,0:28:82.25:0,82,3301	0/1:25,0:25:49.74:547,0,50	1/1:10,0:7:17.96:328,18,0	1/1:10,0:10:1.23:2,1,0	1/1:39,0:20:13.90:130,14,0	1/1:19,0:18:8.02:93,8,0	1/1:17,0:14:14.98:140,15,0	1/1:11,33:43:3.36:9,3,0	1/1:11,0:11:5.97:172,6,0	1/1:13,0:11:22.43:345,22,0	1/1:14,0:14:13.35:526,13,0	1/1:12,1:10:11.50:367,11,0
chr10	91027718	.	GCACACA	G	2416.30	PASS	AB=0.915;AC=32;AF=0.593;AN=54;BaseQRankSum=7.784;DP=568;FS=10.021;HRun=0;HaplotypeScore=143.7674;InbreedingCoeff=0.3152;MQ=46.72;MQ0=49;MQRankSum=-6.254;QD=6.75;ReadPosRankSum=1.366;VQSLOD=2.0174;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:37:87.77:0,88,2312	0/0:6,0:6:8.98:0,9,288	0/0:34,0:1:0:0,0,0	0/0:36,0:4:2.39:0,2,85	0/1:12,0:12:2.03:12,0,2	1/1:4,12:15:6.02:129,6,0	0/1:26,10:35:15.44:41,0,15	1/1:7,0:7:2.04:99,2,0	0/1:13,0:13:8.50:21,0,8	1/1:7,12:15:35.71:574,36,0	./.	1/1:21,0:19:1.08:56,1,0	1/1:3,14:15:14.74:322,15,0	1/1:19,0:19:0.78:98,1,0	0/0:29,0:28:57.20:0,57,1697	1/1:22,0:20:1.32:47,1,0	0/0:29,0:31:81.26:0,81,2274	1/1:16,2:18:7.29:335,7,0	1/1:11,0:9:5.27:192,5,0	1/1:10,0:10:3.09:9,3,0	1/1:43,0:29:10.27:79,10,0	0/0:15,0:14:7.75:0,8,23	0/0:6,7:10:0:0,0,0	0/1:39,0:39:0.27:1,0,0	0/1:5,2:7:0.93:59,0,1	1/1:17,0:15:11.63:204,12,0	0/1:19,0:20:32.94:204,0,33	1/1:10,0:8:0.42:87,0,0
chr10	91027724	.	A	AACG	724.89	PASS	AB=0.681;AC=25;AF=0.446;AN=56;BaseQRankSum=6.335;DP=607;FS=12.780;HRun=0;HaplotypeScore=143.3491;InbreedingCoeff=0.1063;MQ=49.88;MQ0=41;MQRankSum=-3.328;QD=2.15;ReadPosRankSum=0.169;VQSLOD=1.9329;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:42:99:0,111,1793	0/0:6,0:6:9.03:0,9,168	0/0:36,0:2:3:0,3,28	0/0:39,0:5:8.79:0,9,88	1/1:0,0:13:8.83:57,9,0	0/0:15,0:14:2.44:0,2,7	1/1:13,2:37:2.36:21,2,0	0/1:2,0:13:27.93:66,0,28	1/1:1,0:15:12.09:75,12,0	0/1:17,0:16:34.32:43,0,34	1/1:2,0:1:2.99:24,3,0	1/1:2,0:22:9.22:59,9,0	0/1:15,0:14:6.17:18,0,6	1/1:0,0:21:9.22:41,9,0	0/0:27,0:25:66.22:0,66,1193	0/0:21,0:20:1.52:0,2,17	0/0:34,0:32:86.50:0,86,1504	0/1:6,0:19:58.06:58,0,114	0/1:2,0:14:43.41:61,0,43	1/1:1,0:11:2.02:17,2,0	0/1:14,0:41:1.90:101,0,2	0/1:3,1:16:0.36:0,0,0	0/1:13,0:10:0:0,0,0	0/0:38,0:38:0.47:0,0,1	0/0:5,0:7:1.55:0,2,4	0/1:4,0:19:23.28:163,0,23	0/1:2,0:20:34.20:34,0,103	0/1:5,0:8:20.63:44,0,21
chr10	91027726	.	A	ACG	698.55	PASS	AB=0.985;AC=22;AF=0.393;AN=56;BaseQRankSum=8.149;DP=626;FS=6.998;HRun=0;HaplotypeScore=141.0787;InbreedingCoeff=0.1173;MQ=50.27;MQ0=39;MQRankSum=-4.048;QD=1.94;ReadPosRankSum=3.564;VQSLOD=2.1114;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:43:99:0,108,1288	0/0:6,0:6:9.03:0,9,137	0/0:38,0:2:2.97:0,3,20	0/0:40,0:6:11.64:0,12,93	1/1:14,0:14:8.16:36,8,0	0/0:15,0:14:3.28:0,3,9	0/1:39,0:39:10.29:10,0,43	0/1:15,0:15:36.76:37,0,110	1/1:15,0:15:13.22:53,13,0	0/1:17,1:16:68.68:83,0,69	0/0:1,0:1:2.98:0,3,21	1/1:25,0:23:13.10:61,13,0	0/1:16,0:15:11.15:11,0,31	1/1:22,0:22:10.10:42,10,0	0/0:27,0:25:69.13:0,69,920	0/0:23,0:22:4.79:0,5,41	0/0:34,0:32:88.93:0,89,1132	0/1:18,1:19:22.82:117,0,23	0/1:16,0:14:60.12:60,0,73	1/1:11,0:11:2.57:10,3,0	1/1:55,0:43:21.68:103,22,0	0/0:16,0:16:2.75:0,3,25	0/0:13,1:11:3:0,3,25	0/1:39,1:40:0.03:0,0,1	0/0:6,0:6:1.82:0,2,5	0/1:23,0:21:33.35:134,0,33	0/1:21,0:21:8.29:55,0,8	0/1:10,0:9:20.21:53,0,20
chr10	91028082	.	GCACACACA	G	2728.06	PASS	AB=0.680;AC=23;AF=0.479;AN=48;BaseQRankSum=8.648;DP=585;FS=0.624;HRun=0;HaplotypeScore=166.4191;InbreedingCoeff=0.2512;MQ=50.58;MQ0=20;MQRankSum=-6.564;QD=9.03;ReadPosRankSum=3.377;VQSLOD=2.6066;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:47:87.28:0,87,3084	0/0:4,0:4:6.02:0,6,254	0/0:42,0:22:21.04:0,21,466	0/0:48,0:17:24.06:0,24,492	0/0:5,6:10:0:0,0,0	./.	0/1:16,2:32:39.26:70,0,39	1/1:4,15:18:42.06:924,42,0	1/1:1,13:14:3:79,3,0	0/1:6,0:19:97.25:122,0,97	./.	0/1:8,11:19:25.84:93,0,26	1/1:9,0:17:9.38:141,9,0	1/1:1,13:15:5.85:93,6,0	0/0:17,0:19:45.15:0,45,1650	0/0:8,1:20:3:0,3,25	0/0:26,0:25:54.16:0,54,1896	0/1:7,0:15:20.97:68,0,21	0/1:8,1:7:85.79:86,0,107	0/0:9,6:14:3.01:0,3,61	1/1:26,22:44:2.78:30,3,0	./.	./.	0/1:16,0:33:0.04:0,0,0	1/1:8,0:12:3.41:17,3,0	1/1:6,10:16:30.10:689,30,0	1/1:7,6:12:8.08:235,8,0	0/1:6,4:9:78.82:239,0,79
chr10	91028107	.	CAT	C	34.17	PASS	AB=0.993;AC=11;AF=0.204;AN=54;BaseQRankSum=2.829;DP=628;FS=62.948;HRun=0;HaplotypeScore=150.7979;InbreedingCoeff=0.0637;MQ=37.06;MQ0=37;MQRankSum=2.541;QD=0.16;ReadPosRankSum=-0.922;VQSLOD=0.4294;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:48:59.48:0,59,1352	0/0:5,0:5:8.70:0,9,123	0/0:20,0:3:9.03:0,9,171	0/0:32,0:5:14.64:0,15,207	./.	1/1:22,1:17:5.33:27,5,0	0/1:35,0:27:4.28:4,0,56	0/0:28,0:25:64.01:0,64,727	0/1:18,0:18:14.62:15,0,23	0/0:26,1:26:6.54:0,7,432	0/0:11,0:9:2.90:0,3,16	0/1:21,0:21:0.90:39,0,1	0/1:19,1:19:2.04:2,0,131	0/1:17,0:17:16.61:29,0,17	0/0:22,0:22:53.39:0,53,945	0/0:20,0:18:3:0,3,27	0/0:44,0:42:89.20:0,89,1493	0/0:18,0:18:8.51:0,9,311	0/0:19,0:17:27.74:0,28,653	0/1:15,0:13:12.06:12,0,89	1/1:54,1:48:2.92:18,3,0	0/0:12,0:11:2.22:0,2,7	0/0:11,0:11:2.92:0,3,23	0/0:33,0:31:10.11:0,10,89	0/0:11,0:10:3:0,3,27	0/0:23,0:20:0.26:0,0,213	0/0:15,0:14:1.61:0,2,61	0/1:11,0:10:15.76:16,0,106
chr10	91028108	.	ATG	A	598.61	PASS	AB=0.966;AC=21;AF=0.375;AN=56;BaseQRankSum=6.585;DP=606;FS=35.661;HRun=0;HaplotypeScore=146.9113;InbreedingCoeff=0.0715;MQ=37.09;MQ0=37;MQRankSum=-1.720;QD=1.83;ReadPosRankSum=0.033;VQSLOD=1.3824;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:48:42.01:0,42,1076	0/0:4,0:4:5.88:0,6,88	0/0:20,0:3:9.01:0,9,126	0/0:31,0:5:3.01:0,3,120	0/1:11,0:10:0:0,0,0	1/1:22,0:16:5.05:45,5,0	0/1:31,2:25:9.17:9,0,29	0/0:26,0:23:38.61:0,39,350	0/1:17,0:18:10.17:33,0,10	0/1:24,0:23:40.39:40,0,185	0/0:11,0:9:0:0,0,0	1/1:19,2:21:14.51:143,15,0	0/1:19,0:18:4:46,0,4	1/1:16,0:16:8.46:104,8,0	0/0:22,0:22:43.42:0,43,789	0/0:17,0:15:2.84:0,3,35	0/0:45,1:44:76.71:0,77,1233	0/1:17,1:18:14.11:14,0,166	0/1:19,0:17:2.08:2,0,385	0/1:14,1:13:36.91:37,0,87	1/1:44,7:44:2.99:42,3,0	1/1:11,0:10:2.74:12,3,0	0/0:11,0:11:2.92:0,3,30	0/0:30,0:29:12.59:0,13,123	0/0:11,0:10:3.01:0,3,34	0/1:23,0:20:68.80:90,0,69	0/1:13,2:14:12.16:88,0,12	0/1:10,1:10:48.52:49,0,93
chr10	91028110	.	GCACA	G	937.01	PASS	AB=0.939;AC=24;AF=0.462;AN=52;BaseQRankSum=0.883;DP=624;FS=14.286;HRun=0;HaplotypeScore=156.9208;InbreedingCoeff=0.5648;MQ=36.59;MQ0=40;MQRankSum=0.321;QD=3.54;ReadPosRankSum=-0.615;VQSLOD=1.9836;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:48:9.69:10,0,598	0/1:4,0:4:14.97:15,0,64	./.	./.	0/0:11,0:11:3.01:0,3,50	1/1:21,1:17:6.02:77,6,0	1/1:29,3:24:6.02:78,6,0	0/0:31,0:27:9.03:0,9,136	0/0:19,0:21:11.57:0,12,89	1/1:21,2:24:16.51:192,17,0	1/1:9,0:9:3:28,3,0	0/0:23,0:23:11.87:0,12,101	1/1:10,0:18:15.02:139,15,0	0/0:16,0:16:3.68:0,4,76	0/0:22,0:21:23.79:0,24,403	1/1:16,1:16:6.02:91,6,0	0/0:40,0:45:63.14:0,63,966	1/1:16,1:18:8.07:132,8,0	0/0:21,0:19:16.30:0,16,270	0/0:16,0:14:6.86:0,7,93	0/0:51,0:44:2.04:0,2,7	1/1:10,0:9:3:28,3,0	1/1:9,1:11:3.01:47,3,0	1/1:26,4:30:15.05:232,15,0	1/1:9,3:11:2.77:46,3,0	0/0:22,0:19:20.67:0,21,273	0/0:18,0:17:15.32:0,15,154	0/0:11,0:10:8.38:0,8,77
chr10	91028905	.	G	GA	1416.80	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.668;DP=639;FS=10.356;HRun=5;HaplotypeScore=64.5231;InbreedingCoeff=0.9993;MQ=82.21;MQ0=0;MQRankSum=-3.171;QD=30.14;ReadPosRankSum=2.036;VQSLOD=3.9405;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:90.20:0,90,956	0/0:13,0:13:39.09:0,39,413	0/0:20,0:20:51.01:0,51,512	0/0:21,0:21:51.83:0,52,481	0/0:21,0:21:57.14:0,57,612	0/0:22,0:22:60.13:0,60,636	0/0:26,0:26:69.15:0,69,726	0/0:26,0:26:63.14:0,63,658	0/0:22,0:22:57.12:0,57,603	0/0:14,0:14:38.89:0,39,400	0/0:29,0:29:75.17:0,75,796	0/0:25,0:25:75.12:0,75,790	0/0:23,0:23:66.16:0,66,709	0/0:23,0:23:66.17:0,66,709	0/0:24,0:24:69.17:0,69,740	0/0:24,0:24:69.17:0,69,741	0/0:31,0:31:84.19:0,84,893	0/0:28,0:28:72.14:0,72,755	0/0:31,0:31:84.17:0,84,875	0/0:17,0:17:45.11:0,45,483	0/0:21,0:21:60.13:0,60,636	0/0:11,0:11:33.07:0,33,347	1/1:1,19:20:48.15:631,48,0	1/1:2,25:27:69.22:907,69,0	0/0:29,0:29:87.20:0,87,927	0/0:25,0:25:72.17:0,72,767	0/0:21,0:21:63.09:0,63,661	0/0:9,0:9:27.07:0,27,290
chr10	91030545	.	CCA	C	10433.58	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=11.289;DP=649;FS=1.377;HRun=0;HaplotypeScore=96.7016;InbreedingCoeff=0.9916;MQ=71.59;MQ0=2;MQRankSum=-6.127;QD=43.66;ReadPosRankSum=2.928;VQSLOD=6.2653;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,2472	0/0:12,0:12:36.12:0,36,731	0/0:20,0:19:57.19:0,57,1086	0/0:18,0:18:54.18:0,54,1054	0/0:26,0:26:78.27:0,78,1579	1/1:0,12:11:33.11:536,33,0	1/1:0,28:28:63.22:1022,63,0	0/0:30,0:30:90.29:0,90,1755	0/0:25,0:25:60.16:0,60,1146	1/1:0,33:33:96.32:1539,96,0	1/1:1,22:23:57.17:926,57,0	0/0:33,0:33:81.08:0,81,1570	1/1:0,20:20:57.19:924,57,0	0/0:17,0:17:45.15:0,45,905	0/0:24,0:24:72.23:0,72,1417	1/1:0,35:35:96.33:1549,96,0	0/0:27,0:27:81.23:0,81,1556	1/1:1,16:17:48.15:748,48,0	0/0:22,0:22:66.16:0,66,1235	0/0:22,0:21:63.22:0,63,1279	0/0:30,0:30:84.23:0,84,1551	1/1:0,19:19:54.18:878,54,0	1/1:1,14:15:42.14:664,42,0	1/1:2,12:14:42.08:629,42,0	1/1:0,23:22:63.21:1019,63,0	0/0:31,0:31:93.32:0,93,1856	0/0:26,0:26:69.24:0,69,1395	0/0:3,0:3:9.03:0,9,183
chr10	91030579	.	G	GTTT	5802.24	PASS	AB=0.738;AC=43;AF=0.768;AN=56;BaseQRankSum=5.934;DP=634;FS=7.516;HRun=13;HaplotypeScore=139.4811;InbreedingCoeff=0.8078;MQ=66.76;MQ0=1;MQRankSum=-1.789;QD=11.65;ReadPosRankSum=-2.728;VQSLOD=1.7631;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:42:98.09:0,98,1003	0/0:12,0:13:26.87:0,27,276	0/0:16,0:11:8.73:0,9,80	0/0:19,0:14:3.33:0,3,131	1/1:8,2:29:48.55:399,49,0	1/1:8,0:14:22.19:189,22,0	1/1:13,1:23:39.65:313,40,0	1/1:16,0:42:67.55:567,68,0	1/1:5,0:19:15.69:89,16,0	0/1:20,0:31:0.88:45,0,1	1/1:12,0:26:1.32:129,1,0	1/1:8,0:32:6.45:152,6,0	1/1:8,0:19:44.86:365,45,0	1/1:5,0:12:13.22:125,13,0	0/0:23,0:24:59.95:0,60,613	1/1:10,0:24:44.34:326,44,0	0/0:20,0:21:44.91:0,45,467	1/1:6,1:22:41.80:342,42,0	1/1:7,2:21:40.69:363,41,0	1/1:6,1:22:24.74:322,25,0	1/1:5,0:12:14.94:114,15,0	1/1:10,2:17:35.29:308,35,0	1/1:4,1:22:12.79:285,13,0	1/1:4,1:19:23.91:184,24,0	1/1:10,0:24:56.33:430,56,0	1/1:8,0:30:53.60:404,54,0	1/1:8,1:28:35.30:303,35,0	1/1:0,0:6:7.22:48,7,0
chr10	91031015	.	A	AAAAT	3902.52	PASS	AB=0.615;AC=19;AF=0.380;AN=50;BaseQRankSum=-0.964;DP=360;FS=0.000;HRun=0;HaplotypeScore=65.8643;InbreedingCoeff=0.8231;MQ=54.50;MQ0=12;MQRankSum=-5.737;QD=27.10;ReadPosRankSum=-2.284;VQSLOD=2.8883;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:54.18:0,54,888	0/0:2,0:2:6.02:0,6,99	0/0:12,0:4:6.02:0,6,98	./.	1/1:15,4:18:14.97:293,15,0	0/0:12,0:12:21.07:0,21,346	0/0:11,0:11:15.02:0,15,198	1/1:25,7:25:27.09:601,27,0	1/1:9,2:11:15.05:291,15,0	0/0:15,0:15:27.09:0,27,446	0/0:11,0:11:21.07:0,21,344	1/1:4,2:6:9.03:217,9,0	0/0:11,0:10:12.04:0,12,195	1/1:7,0:7:12.03:167,12,0	0/0:11,0:11:12.03:0,12,176	0/0:13,0:13:24.08:0,24,396	0/0:15,0:15:39.11:0,39,616	0/0:20,0:20:45.10:0,45,665	1/1:10,5:14:24.08:524,24,0	1/1:8,2:10:12.04:231,12,0	./.	./.	0/0:14,0:14:6.01:0,6,75	0/0:8,0:8:9.01:0,9,123	0/0:18,0:18:36.07:0,36,541	0/1:6,10:16:10.21:790,0,10	1/1:12,3:16:17.99:329,18,0	1/1:8,4:11:24.08:459,24,0
chr10	91031039	.	TA	T	3072.20	PASS	AB=0.621;AC=42;AF=0.750;AN=56;BaseQRankSum=3.387;DP=363;FS=3.005;HRun=14;HaplotypeScore=50.6640;InbreedingCoeff=0.6499;MQ=56.94;MQ0=6;MQRankSum=0.273;QD=10.70;ReadPosRankSum=1.795;VQSLOD=3.3051;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:65.65:0,66,540	0/0:5,0:5:12.01:0,12,111	0/0:9,0:4:5.68:0,6,39	0/0:6,0:3:2.94:0,3,18	1/1:5,4:9:11.80:82,12,0	1/1:1,13:14:29.75:205,30,0	1/1:2,5:8:13.86:88,14,0	0/1:11,15:22:13.33:182,0,13	1/1:3,5:8:14.82:103,15,0	1/1:6,15:20:37.69:264,38,0	0/1:5,9:14:18.86:131,0,19	1/1:4,3:7:10.90:67,11,0	1/1:4,7:9:19.89:129,20,0	1/1:4,5:9:14.80:103,15,0	0/0:7,1:8:3.32:0,3,161	1/1:3,9:12:23.61:157,24,0	0/0:17,0:19:34.35:0,34,369	1/1:3,16:21:45.72:299,46,0	1/1:12,10:22:43.51:290,44,0	1/1:2,6:9:19.79:126,20,0	1/1:0,2:2:2.94:21,3,0	1/1:1,4:5:11.84:79,12,0	1/1:3,6:9:14.84:103,15,0	1/1:0,4:4:11.90:82,12,0	1/1:7,13:20:23.69:164,24,0	1/1:10,11:21:21.80:217,22,0	1/1:6,11:17:25.77:170,26,0	1/1:4,11:14:26.66:185,27,0
chr10	91031224	.	ATTTAT	A	5757.31	PASS	AB=0.761;AC=12;AF=0.214;AN=56;BaseQRankSum=14.839;DP=959;FS=153.444;HRun=0;HaplotypeScore=177.9315;InbreedingCoeff=-0.2727;MQ=71.10;MQ0=0;MQRankSum=-15.052;QD=14.50;ReadPosRankSum=0.011;VQSLOD=1.1151;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:35,19:54:99:775,0,2471	0/1:10,4:14:99:216,0,763	0/0:26,0:26:75.26:0,75,2198	0/0:24,0:24:44.88:0,45,1377	0/1:20,23:43:99:891,0,1588	0/1:24,7:31:99:340,0,1702	0/1:23,7:30:99:302,0,1890	0/0:56,0:56:99:0,160,4689	0/1:37,14:51:99:686,0,3145	0/0:55,0:55:99:0,160,4904	0/0:48,0:48:99:0,138,4274	0/0:21,0:21:63.22:0,63,1929	0/0:20,0:20:57.20:0,57,1757	0/0:27,0:27:75.26:0,75,2315	0/0:29,0:29:81.28:0,81,2491	0/0:51,0:51:99:0,151,4511	0/1:18,5:23:99:195,0,1355	0/0:22,0:22:54.19:0,54,1671	0/0:44,0:44:99:0,132,3782	0/0:27,0:27:81.28:0,81,2493	0/0:45,0:45:99:0,135,4054	0/0:16,0:16:48.16:0,48,1504	0/1:10,10:20:99:466,0,788	0/1:27,7:34:99:165,0,2288	0/1:12,14:26:99:755,0,1052	0/1:27,12:39:99:603,0,2107	0/0:51,0:51:99:0,148,4550	0/1:25,7:32:99:363,0,1882
chr10	91032542	.	CT	C	7820.47	PASS	AB=0.675;AC=13;AF=0.232;AN=56;BaseQRankSum=13.776;DP=1250;FS=2.886;HRun=2;HaplotypeScore=126.6388;InbreedingCoeff=0.0983;MQ=72.92;MQ0=0;MQRankSum=-0.346;QD=16.71;ReadPosRankSum=1.481;VQSLOD=5.1678;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:92,0:92:99:0,271,4019	0/0:30,0:30:84.28:0,84,1259	0/0:20,0:20:54.18:0,54,798	0/0:21,0:21:28.26:0,28,598	0/1:27,31:58:99:1015,0,914	0/0:50,0:50:99:0,147,2132	0/0:47,0:47:99:0,138,2007	0/1:26,19:45:99:587,0,891	0/1:29,23:52:99:704,0,1110	0/0:56,0:56:99:0,160,2338	0/0:60,0:60:99:0,166,2441	1/1:0,23:23:63.20:818,63,0	0/0:22,1:23:30.20:0,30,846	1/1:0,26:26:69.22:895,69,0	0/0:64,0:64:99:0,190,2812	0/0:45,1:46:99:0,100,1963	0/0:57,0:57:99:0,172,2552	0/0:43,0:43:99:0,129,1929	0/1:24,25:49:99:828,0,883	0/1:27,27:54:99:784,0,1001	0/1:24,24:48:99:719,0,900	0/0:25,0:25:75.23:0,75,1101	0/0:55,0:55:99:0,157,2308	0/0:50,0:50:99:0,150,2194	0/0:43,0:43:99:0,126,1830	0/1:32,22:54:99:700,0,1192	0/1:24,21:45:99:609,0,950	0/1:6,8:14:99:162,0,237
chr10	91032733	.	TCAAAAAC	T	3804.73	PASS	AB=0.759;AC=10;AF=0.179;AN=56;BaseQRankSum=13.761;DP=1064;FS=1.343;HRun=0;HaplotypeScore=254.1888;InbreedingCoeff=-0.2174;MQ=62.70;MQ0=0;MQRankSum=-11.221;QD=9.23;ReadPosRankSum=-2.910;VQSLOD=2.2737;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:56,17:72:99:694,0,3519	0/1:12,6:18:99:215,0,742	0/0:33,0:31:56.49:0,56,1567	0/0:28,0:27:51.92:0,52,1682	0/0:26,6:32:24.20:0,24,1717	0/1:27,14:41:99:577,0,2347	0/1:29,11:40:99:254,0,1797	0/0:51,0:51:99:0,117,3778	0/0:35,0:35:96.31:0,96,3311	0/0:36,0:36:72.25:0,72,2554	0/0:21,0:21:42.14:0,42,1308	0/0:16,0:16:39.13:0,39,1312	0/0:18,0:18:42.14:0,42,1459	0/0:18,0:18:51.16:0,51,1726	0/0:43,0:43:99:0,114,4035	0/0:35,0:35:99:0,102,3456	0/1:55,26:81:99:637,0,3917	0/0:59,0:58:99:0,150,5210	0/0:35,0:35:81.28:0,81,2546	0/0:41,0:41:99:0,117,4115	0/0:75,0:75:99:0,199,6699	0/0:20,0:20:54.17:0,54,1883	0/1:24,13:37:99:369,0,1988	0/1:28,14:42:26.64:27,0,1880	0/1:15,10:25:99:199,0,1103	0/1:33,15:48:99:788,0,2214	0/0:55,0:55:99:0,160,5607	0/1:5,2:7:45.63:46,0,331
chr10	91032912	.	TG	T	9913.84	PASS	AB=0.732;AC=21;AF=0.375;AN=56;BaseQRankSum=18.240;DP=1231;FS=7.823;HRun=3;HaplotypeScore=151.8016;InbreedingCoeff=-0.6012;MQ=78.58;MQ0=1;MQRankSum=-2.237;QD=9.67;ReadPosRankSum=3.819;VQSLOD=2.3386;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:58,54:112:99:1152,0,1972	0/1:12,10:22:99:226,0,335	0/0:51,0:40:73.06:0,73,899	0/0:51,0:44:58.38:0,58,682	0/1:24,37:61:99:1081,0,813	0/1:20,17:36:99:377,0,667	0/1:19,16:35:99:289,0,612	0/1:31,22:53:99:564,0,979	0/1:21,20:41:99:343,0,741	0/1:52,0:52:99:149,0,1035	0/1:44,0:44:85.93:86,0,797	0/0:18,0:18:54.17:0,54,754	0/0:14,0:14:42.12:0,42,578	0/0:22,0:22:66.20:0,66,908	0/1:46,0:46:43.93:44,0,859	0/0:29,0:29:14.49:0,14,764	0/1:36,25:61:99:530,0,1195	0/1:47,0:47:20.58:21,0,1083	0/1:17,20:37:99:486,0,509	0/1:30,22:52:99:646,0,973	0/1:36,33:69:99:721,0,1022	0/0:21,0:21:44.93:0,45,703	0/1:25,25:50:99:593,0,797	0/1:29,29:58:99:629,0,1026	0/1:21,17:37:99:386,0,646	0/1:25,27:52:99:712,0,821	0/1:14,23:36:99:561,0,381	0/1:7,14:21:99:319,0,248
chr10	91032914	.	G	GT	1558.17	PASS	AB=0.734;AC=5;AF=0.089;AN=56;BaseQRankSum=11.278;DP=1235;FS=0.888;HRun=0;HaplotypeScore=190.3672;InbreedingCoeff=-0.0980;MQ=78.53;MQ0=1;MQRankSum=-0.863;QD=6.99;ReadPosRankSum=-0.371;VQSLOD=3.3183;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:117,0:117:99:0,261,2646	0/0:20,0:20:42.28:0,42,426	0/0:51,0:40:89.62:0,90,1150	0/0:50,0:44:47.82:0,48,823	0/0:61,0:61:99:0,147,1225	0/0:37,0:36:86.70:0,87,889	0/0:34,0:34:73.37:0,73,780	0/0:52,0:52:99:0,132,1357	0/0:41,0:41:87.22:0,87,927	0/1:34,18:52:99:380,0,1107	0/1:32,14:46:99:390,0,844	0/0:19,0:19:54.18:0,54,755	0/0:14,0:14:42.12:0,42,569	0/0:22,0:22:66.22:0,66,919	0/1:24,23:47:99:346,0,887	0/1:21,10:31:99:186,0,713	0/0:62,0:62:99:0,148,1581	0/1:30,17:47:99:374,0,1057	0/0:36,0:36:55.93:0,56,768	0/0:52,0:52:99:0,136,1362	0/0:65,0:65:99:0,150,1506	0/0:20,0:20:57.19:0,57,782	0/0:48,0:48:99:0,111,1091	0/0:61,0:61:99:0,134,1329	0/0:36,0:36:86.04:0,86,866	0/0:54,0:54:99:0,127,1223	0/0:38,0:37:86:0,86,715	0/0:21,0:21:43.27:0,43,365
chr10	91033014	.	AC	A	12776.53	PASS	AB=0.687;AC=22;AF=0.393;AN=56;BaseQRankSum=17.307;DP=1051;FS=1.951;HRun=2;HaplotypeScore=178.5241;InbreedingCoeff=-0.6471;MQ=74.53;MQ0=0;MQRankSum=-9.425;QD=14.04;ReadPosRankSum=3.185;VQSLOD=4.7514;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:37,31:68:99:861,0,1398	0/1:6,10:16:99:272,0,186	0/0:19,0:19:51.17:0,51,751	0/0:27,0:27:61.44:0,61,1068	0/1:29,22:51:99:633,0,1114	0/1:14,13:27:99:388,0,511	0/1:21,18:39:99:583,0,778	0/1:30,22:52:99:688,0,1137	0/1:19,19:38:99:663,0,675	0/1:23,29:52:99:886,0,863	0/1:14,8:22:99:251,0,460	0/0:33,0:33:87.29:0,87,1302	0/0:21,0:21:63.20:0,63,925	0/0:24,0:24:66.21:0,66,969	0/1:19,31:50:99:951,0,665	0/1:25,15:40:99:469,0,894	0/1:24,14:38:99:433,0,923	0/1:22,18:40:99:580,0,847	0/1:22,13:35:99:394,0,653	0/1:16,22:37:99:750,0,479	0/1:42,28:70:99:813,0,1373	0/0:17,0:17:48.16:0,48,719	0/1:20,19:39:99:622,0,769	0/1:40,18:58:99:539,0,1385	0/1:13,11:24:99:320,0,515	0/1:29,20:49:99:631,0,1094	0/1:27,20:46:99:710,0,854	0/1:7,10:17:99:338,0,263
chr10	91033045	.	C	CT	8250.35	PASS	AB=0.772;AC=23;AF=0.411;AN=56;BaseQRankSum=18.084;DP=1038;FS=1.650;HRun=1;HaplotypeScore=318.1842;InbreedingCoeff=-0.4853;MQ=58.26;MQ0=0;MQRankSum=-15.349;QD=9.07;ReadPosRankSum=0.617;VQSLOD=2.4151;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:50,18:69:49.47:571,0,49	0/1:8,3:11:2.77:99,0,3	0/0:19,0:18:35.44:0,35,287	0/0:11,0:11:7.35:0,7,155	0/1:35,5:41:42.90:228,0,43	1/1:21,11:32:26.25:370,26,0	0/1:31,24:56:10.70:777,0,11	0/1:41,7:48:99:290,0,242	0/1:22,24:46:11.85:679,0,12	0/1:23,9:33:27.25:376,0,27	0/1:13,2:16:18.63:113,0,19	0/0:28,0:28:17.29:0,17,120	0/0:24,0:24:11.80:0,12,74	0/0:30,0:30:46.84:0,47,159	0/1:33,17:50:80.88:678,0,81	0/1:27,14:42:50.51:461,0,51	0/1:44,9:54:99:287,0,485	0/1:38,12:53:16.59:493,0,17	0/1:27,9:37:71.60:386,0,72	0/1:20,15:35:2.96:342,0,3	0/1:75,7:82:99:206,0,215	0/0:14,0:14:2.96:0,3,19	0/1:19,8:27:24.41:203,0,24	0/1:36,17:55:79.04:322,0,79	0/1:18,7:25:21.91:184,0,22	0/1:28,11:39:77.84:475,0,78	0/1:28,17:46:21.09:547,0,21	0/1:4,6:10:6.08:163,0,6
chr10	91033049	.	G	GA	6531.43	PASS	AB=0.757;AC=13;AF=0.232;AN=56;BaseQRankSum=-18.198;DP=930;FS=17.238;HRun=0;HaplotypeScore=265.6506;InbreedingCoeff=0.0933;MQ=57.69;MQ0=0;MQRankSum=11.561;QD=14.98;ReadPosRankSum=7.170;VQSLOD=4.0506;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,136,864	0/0:6,0:6:13.97:0,14,75	0/0:20,0:17:34.29:0,34,455	0/0:11,0:11:18.02:0,18,205	0/1:22,14:36:28.87:588,0,29	0/0:27,0:27:61.12:0,61,346	0/0:51,0:51:99:0,110,579	0/1:38,11:49:99:600,0,177	0/1:31,15:46:99:361,0,259	0/0:28,0:28:56.17:0,56,352	0/0:14,0:14:24.19:0,24,174	1/1:2,28:30:57.16:746,57,0	0/0:14,0:14:18.98:0,19,139	1/1:0,29:29:75.25:994,75,0	0/0:47,0:46:99:0,118,798	0/0:34,1:35:44.46:0,44,462	0/0:39,0:39:99:0,101,819	0/0:45,0:45:80.67:0,81,444	0/1:27,5:32:99:214,0,203	0/1:25,5:29:99:234,0,111	0/1:32,55:87:99:1499,0,101	0/0:11,0:11:14.91:0,15,112	0/0:21,0:21:37.25:0,37,206	0/0:45,0:45:78.56:0,79,533	0/0:22,0:22:35.83:0,36,206	0/1:23,17:40:99:435,0,211	0/1:28,19:46:99:746,0,165	0/1:7,3:10:49.34:115,0,49
chr10	91033051	.	G	GA	560.42	PASS	AB=0.757;AC=19;AF=0.339;AN=56;BaseQRankSum=18.932;DP=938;FS=0.896;HRun=0;HaplotypeScore=284.2588;InbreedingCoeff=-0.5174;MQ=56.96;MQ0=0;MQRankSum=-13.534;QD=0.81;ReadPosRankSum=5.283;VQSLOD=2.0451;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:45,18:63:17.90:18,0,462	0/1:5,3:8:6.07:6,0,26	0/0:19,0:16:39.97:0,40,463	0/0:11,0:11:18.02:0,18,205	0/1:32,4:36:25.31:25,0,169	0/1:17,11:28:55.78:56,0,117	0/1:29,23:52:44.47:44,0,116	0/1:45,6:51:67.78:68,0,278	0/1:22,23:45:72.54:83,0,73	0/0:19,8:27:0.18:0,0,160	0/1:13,2:15:28.93:29,0,47	0/0:28,0:28:21.69:0,22,178	0/0:13,0:13:17.75:0,18,145	0/0:29,0:29:65.01:0,65,276	0/1:30,17:46:86.03:86,0,294	0/1:22,14:36:48.44:48,0,221	0/1:36,9:45:13.36:13,0,595	0/1:32,12:44:80.58:81,0,164	0/1:26,9:35:68.82:69,0,99	0/1:18,13:30:14.50:14,0,97	0/0:81,7:88:49.10:0,49,479	0/0:10,0:10:13.25:0,13,94	0/1:11,8:19:8.69:9,0,22	0/1:29,16:46:4.87:5,0,296	0/0:14,6:20:1.17:0,1,87	0/1:25,11:36:33.25:33,0,203	0/1:29,17:45:5.61:6,0,160	0/1:4,6:10:19.15:19,0,32
chr10	91033057	.	G	GA	7549.56	PASS	AB=0.762;AC=23;AF=0.411;AN=56;BaseQRankSum=15.610;DP=924;FS=20.762;HRun=1;HaplotypeScore=243.8450;InbreedingCoeff=-0.5717;MQ=60.00;MQ0=0;MQRankSum=-13.977;QD=9.34;ReadPosRankSum=3.859;VQSLOD=0.4798;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:42,18:61:99:548,0,362	0/1:6,1:8:23.34:93,0,23	0/0:22,0:19:39.38:0,39,349	0/0:12,0:12:11.59:0,12,88	0/1:32,4:37:99:176,0,102	0/1:13,11:24:57.41:346,0,57	0/1:29,23:53:99:819,0,100	0/1:41,6:47:99:439,0,271	0/1:22,23:45:52.64:581,0,53	0/1:12,8:21:58.12:255,0,58	0/1:12,2:14:60.13:81,0,60	0/0:29,0:29:44.09:0,44,286	0/0:11,0:11:12.26:0,12,89	0/0:30,0:30:69.12:0,69,313	0/1:29,17:46:99:437,0,288	0/1:22,14:36:99:419,0,144	0/1:37,9:48:99:341,0,562	0/1:33,11:44:99:464,0,143	0/1:28,9:37:99:432,0,150	0/1:17,13:30:99:265,0,108	0/1:81,7:88:99:202,0,486	0/0:12,0:12:17.96:0,18,145	0/1:9,8:17:7.14:151,0,7	0/1:27,17:44:99:300,0,249	1/1:12,6:19:3.16:216,3,0	0/1:21,11:32:99:358,0,114	0/1:26,16:42:67.72:447,0,68	0/1:7,6:13:41.97:182,0,42
chr10	91033673	.	G	GCT	2868	PASS	AB=0.909;AC=12;AF=0.214;AN=56;BaseQRankSum=11.260;DP=1202;FS=5.583;HRun=0;HaplotypeScore=245.8800;InbreedingCoeff=-0.3130;MQ=64.28;MQ0=5;MQRankSum=-4.090;QD=4.77;ReadPosRankSum=-5.689;VQSLOD=1.6219;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:84.93:0,85,1005	0/0:25,0:25:1.69:0,2,258	0/0:44,0:29:1.16:0,1,200	0/1:49,0:27:12.25:12,0,129	0/0:44,0:45:14.38:0,14,358	0/0:29,0:29:14.76:0,15,382	0/0:46,0:46:17.36:0,17,470	0/1:83,0:83:99:260,0,489	0/1:47,0:47:25.90:26,0,556	0/1:34,24:60:99:828,0,557	0/1:19,5:25:99:201,0,305	0/0:28,1:29:18.42:0,18,691	0/0:18,0:19:38.68:0,39,419	0/0:27,0:31:80.73:0,81,888	0/1:34,14:49:99:468,0,647	0/1:39,13:52:99:661,0,641	0/0:34,0:38:37.75:0,38,663	0/1:41,12:54:99:360,0,854	0/1:46,0:47:99:106,0,314	0/0:45,0:45:45.77:0,46,516	0/1:42,0:44:19.88:20,0,652	0/0:18,0:22:44.43:0,44,425	0/0:45,0:45:14.68:0,15,481	0/0:42,0:42:63.12:0,63,738	0/0:42,0:42:37.92:0,38,634	0/1:52,1:51:18.56:19,0,717	0/0:32,0:32:0.68:0,1,489	0/1:38,0:38:53.25:53,0,173
chr10	91034175	.	AAGGCTCTGAAGCAGC	A	3135.24	PASS	AB=0.856;AC=6;AF=0.107;AN=56;BaseQRankSum=8.997;DP=1030;FS=0.699;HRun=0;HaplotypeScore=426.0753;InbreedingCoeff=-0.1201;MQ=69.02;MQ0=0;MQRankSum=-9.015;QD=15.29;ReadPosRankSum=2.636;VQSLOD=0.8581;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:101,0:101:99:0,286,20000	0/0:15,0:15:42.14:0,42,2736	0/0:12,0:12:27.02:0,27,1563	0/0:12,0:12:30.07:0,30,1028	0/0:47,0:47:99:0,135,8706	0/0:49,0:49:99:0,141,9696	0/0:62,0:62:99:0,184,12658	0/0:49,0:49:99:0,147,9519	0/0:37,0:37:99:0,108,7645	0/1:24,10:34:99:1262,0,4103	0/1:19,10:29:99:989,0,3659	0/0:24,0:24:69.24:0,69,4915	0/0:16,0:16:48.16:0,48,3358	0/0:15,0:15:45.15:0,45,2983	0/1:27,4:31:99:449,0,5424	0/1:21,4:25:99:257,0,3847	0/0:90,0:90:99:0,265,18519	0/1:42,4:46:99:153,0,7759	0/0:33,0:33:96.33:0,96,5762	0/0:28,0:28:81.28:0,81,5283	0/0:52,0:52:99:0,147,10006	0/0:16,0:16:48.16:0,48,2951	0/0:30,0:30:81.26:0,81,5501	0/0:49,0:49:99:0,144,9557	0/0:38,0:38:99:0,111,7181	0/1:38,2:40:99:150,0,7606	0/0:32,0:32:96.33:0,96,6781	0/0:18,0:18:42.14:0,42,2938
chr10	91034330	.	C	CT	1297	PASS	AB=0.747;AC=5;AF=0.089;AN=56;BaseQRankSum=12.075;DP=1040;FS=9.004;HRun=0;HaplotypeScore=124.1100;InbreedingCoeff=-0.1001;MQ=73.93;MQ0=0;MQRankSum=-0.621;QD=7.13;ReadPosRankSum=1.326;VQSLOD=3.2538;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:86,0:85:99:0,253,3507	0/0:28,0:28:84.23:0,84,1148	0/0:28,0:23:16.78:0,17,461	0/0:29,0:25:10.98:0,11,395	0/0:37,0:37:99:0,105,1442	0/0:54,0:54:99:0,163,2255	0/0:43,0:43:99:0,126,1703	0/0:57,0:57:99:0,163,2247	0/0:33,0:33:99:0,99,1363	0/1:36,16:52:99:329,0,1189	0/1:20,6:26:99:157,0,561	0/0:21,0:21:57.19:0,57,796	0/0:16,0:16:48.15:0,48,650	0/0:16,0:16:48.16:0,48,671	0/1:25,10:35:99:169,0,948	0/1:18,16:34:99:369,0,649	0/0:56,0:56:99:0,169,2313	0/1:20,14:35:99:391,0,667	0/0:47,0:47:99:0,138,1910	0/0:47,0:47:99:0,141,1943	0/0:22,0:22:66.21:0,66,906	0/0:14,0:14:39.13:0,39,545	0/0:25,0:25:72.22:0,72,979	0/0:34,0:34:99:0,102,1393	0/0:47,0:47:99:0,138,1915	0/0:57,1:58:99:0,134,2297	0/0:36,0:36:99:0,105,1427	0/0:24,0:24:72.24:0,72,981
chr10	91034594	.	AG	A	7208.82	PASS	AB=0.742;AC=21;AF=0.375;AN=56;BaseQRankSum=22.951;DP=918;FS=17.091;HRun=1;HaplotypeScore=190.1596;InbreedingCoeff=-0.6005;MQ=62.67;MQ0=0;MQRankSum=-22.430;QD=9.93;ReadPosRankSum=3.219;VQSLOD=1.2634;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:44,24:68:99:461,0,1828	0/1:16,3:19:97.07:97,0,613	0/0:9,0:9:24.08:0,24,358	0/0:10,0:10:21.03:0,21,288	0/1:14,14:28:99:154,0,584	0/1:23,14:37:99:397,0,961	0/1:14,29:43:99:905,0,500	0/1:27,14:41:99:482,0,986	0/1:29,16:45:99:489,0,1206	0/1:33,16:49:99:442,0,1393	0/1:10,6:16:99:149,0,434	0/0:41,0:41:99:0,120,1912	0/0:20,0:20:60.20:0,60,949	0/0:29,0:29:87.30:0,87,1382	0/1:29,16:45:99:492,0,1163	0/1:26,20:46:99:638,0,1109	0/1:27,13:40:99:352,0,1177	0/1:30,10:40:99:268,0,1287	0/1:21,5:26:80.34:80,0,880	0/1:16,5:21:95.12:95,0,704	0/0:60,6:66:73.26:0,73,2709	0/0:17,0:17:51.17:0,51,815	0/1:14,4:18:65.38:65,0,591	0/1:22,10:32:99:149,0,962	0/1:13,11:24:99:355,0,551	0/1:25,16:41:99:499,0,1074	0/1:20,17:37:99:514,0,825	0/1:6,4:10:99:125,0,258
chr10	91035580	.	TAC	T	4164.90	PASS	AB=0.719;AC=31;AF=0.554;AN=56;BaseQRankSum=1.868;DP=618;FS=13.951;HRun=0;HaplotypeScore=149.2835;InbreedingCoeff=0.4320;MQ=61.96;MQ0=20;MQRankSum=1.283;QD=10.33;ReadPosRankSum=5.272;VQSLOD=2.6315;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:24.24:0,24,793	0/1:12,1:12:5.65:6,0,400	0/0:38,0:25:18.06:0,18,276	0/0:36,0:18:20.90:0,21,290	0/1:8,0:17:0:1,0,0	1/1:7,5:12:17.08:190,17,0	1/1:11,7:18:10.23:335,10,0	1/1:14,0:36:30.30:132,30,0	0/0:13,0:19:11.93:0,12,58	1/1:7,15:21:3.17:488,3,0	1/1:11,3:13:7.41:157,7,0	0/0:13,0:21:16.50:0,16,59	1/1:5,6:12:18.64:209,19,0	0/1:6,0:22:14.36:14,0,20	0/1:22,3:25:85.85:86,0,633	0/1:11,16:27:0:467,0,0	0/0:29,1:29:21.38:0,21,747	0/1:13,12:23:9.91:366,0,10	1/1:12,0:19:2.03:35,2,0	0/0:3,0:8:1.25:0,1,3	0/0:31,0:30:1.25:0,1,3	1/1:9,17:25:39.58:464,40,0	1/1:5,4:9:9.02:107,9,0	1/1:10,18:28:44.92:504,45,0	1/1:9,17:26:38.08:418,38,0	1/1:8,0:22:12.63:134,13,0	0/1:10,0:19:52.09:54,0,52	0/0:1,0:1:2.98:0,3,22
chr10	91035593	.	A	AC	2786.66	PASS	AB=0.899;AC=19;AF=0.339;AN=56;BaseQRankSum=9.890;DP=667;FS=0.429;HRun=1;HaplotypeScore=159.2362;InbreedingCoeff=0.3405;MQ=45.10;MQ0=57;MQRankSum=-5.581;QD=9.29;ReadPosRankSum=-1.125;VQSLOD=0.7133;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:71.78:0,72,906	0/0:12,0:11:29.93:0,30,365	0/0:25,0:12:36.12:0,36,462	0/0:30,0:12:34.92:0,35,429	1/1:14,3:15:2.91:20,3,0	0/0:16,0:15:26.91:0,27,170	0/0:22,0:21:34.41:0,34,204	0/1:37,0:32:98.21:658,0,98	1/1:21,4:20:27.36:412,27,0	0/0:33,0:27:45.03:0,45,466	0/0:13,0:10:21.04:0,21,161	0/1:17,9:25:21.30:442,0,21	0/1:13,0:13:16.64:17,0,125	1/1:20,4:24:34.65:386,35,0	0/0:26,0:26:68.53:0,69,779	0/0:29,1:29:20.67:0,21,351	0/0:29,0:27:72.06:0,72,905	0/1:22,2:22:63.79:64,0,248	0/1:21,2:14:78.12:207,0,78	1/1:8,1:7:3.01:42,3,0	1/1:28,18:32:3.01:45,3,0	0/0:31,0:28:42.89:0,43,245	0/0:10,0:9:11.53:0,12,74	0/0:28,0:28:42.81:0,43,244	0/0:28,0:28:43.25:0,43,286	0/1:29,2:24:99:329,0,141	0/1:14,6:19:8.87:266,0,9	1/1:4,1:3:8.67:78,9,0
chr10	91035605	.	CAT	C	356.21	PASS	AB=0.875;AC=9;AF=0.161;AN=56;BaseQRankSum=6.450;DP=669;FS=0.000;HRun=0;HaplotypeScore=175.1624;InbreedingCoeff=0.1267;MQ=40.55;MQ0=68;MQRankSum=-5.169;QD=2.15;ReadPosRankSum=0.282;VQSLOD=2.2421;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:23.15:0,23,987	0/0:13,0:12:33.11:0,33,566	0/0:15,0:6:18.04:0,18,281	0/0:21,0:5:15.05:0,15,268	0/1:17,3:17:0.17:0,0,0	0/0:15,0:14:21.92:0,22,241	0/0:26,0:25:34.87:0,35,348	0/0:40,0:33:56.57:0,57,751	0/1:19,4:19:9.05:84,0,9	0/0:34,2:28:29.95:0,30,995	0/0:11,0:7:12.76:0,13,103	0/1:23,6:27:99:107,0,135	0/1:13,1:13:5.82:6,0,180	0/1:24,4:28:50.67:84,0,51	0/0:26,0:26:55.44:0,55,1092	0/0:30,0:29:26.47:0,26,549	0/0:30,0:28:39.56:0,40,1141	0/0:25,0:23:36.21:0,36,501	0/1:23,0:14:16.49:16,0,215	0/0:8,1:6:1.25:0,1,3	0/0:43,1:30:3.93:0,4,28	0/0:29,1:27:27.02:0,27,361	0/0:10,0:9:12.51:0,13,153	0/0:32,0:29:38.80:0,39,411	0/0:24,0:23:28.72:0,29,425	0/0:29,1:23:2.17:0,2,422	0/1:16,7:21:99:143,0,137	1/1:4,2:4:6.85:46,7,0
chr10	91035610	.	AC	A	608.23	PASS	AB=0.860;AC=14;AF=0.259;AN=54;BaseQRankSum=6.905;DP=666;FS=1.178;HRun=2;HaplotypeScore=166.8836;InbreedingCoeff=-0.0594;MQ=40.29;MQ0=69;MQRankSum=-6.628;QD=1.84;ReadPosRankSum=0.465;VQSLOD=-0.7194;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,2:30:59.40:0,59,791	0/0:14,0:13:31.07:0,31,371	0/0:14,0:5:9:0,9,101	0/0:19,0:5:15.05:0,15,200	0/0:14,5:16:0.13:0,0,0	0/0:14,0:13:26.44:0,26,300	0/1:25,0:24:1.87:2,0,288	0/0:35,0:28:59.48:0,59,621	0/1:20,5:21:12.16:99,0,12	0/0:34,3:29:39.12:0,39,896	0/0:10,2:8:11.32:0,11,113	0/1:22,8:28:58.79:113,0,59	0/1:10,6:15:5.47:5,0,221	0/1:24,7:30:0.25:126,0,0	0/0:28,0:28:75.19:0,75,982	0/1:27,6:30:68.99:69,0,481	0/0:29,1:28:68.29:0,68,857	0/1:23,3:24:57.51:58,0,508	0/1:19,1:12:19.20:19,0,179	./.	0/1:38,6:30:9.66:67,0,10	0/0:27,2:26:35.68:0,36,415	0/0:7,3:9:12:0,12,132	0/0:25,8:30:35.93:0,36,387	0/1:18,3:20:9.49:9,0,335	0/1:27,1:21:20.53:21,0,248	0/1:14,8:20:17.08:107,0,17	1/1:6,4:7:4.78:60,5,0
chr10	91035611	.	C	CCA	1121.71	PASS	AC=36;AF=0.720;AN=50;BaseQRankSum=3.140;DP=683;FS=2.799;HRun=0;HaplotypeScore=181.2260;InbreedingCoeff=0.5608;MQ=40.25;MQ0=69;MQRankSum=-3.651;QD=2.32;ReadPosRankSum=-2.824;VQSLOD=2.4386;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:24.78:0,25,245	0/0:12,0:13:13.99:0,14,126	./.	./.	0/0:19,0:16:0.32:0,0,1	0/0:11,0:13:3:0,3,33	1/1:18,0:24:7.49:28,7,0	1/1:34,0:27:8.97:93,9,0	1/1:26,0:22:6.40:82,6,0	1/1:39,0:31:10.25:85,10,0	1/1:12,0:8:0.31:0,0,0	1/1:21,4:33:35.53:312,36,0	1/1:17,0:16:6.40:41,6,0	1/1:29,0:30:15.43:117,15,0	0/0:28,0:29:26.64:0,27,268	1/1:29,0:31:0.67:67,1,0	0/0:30,0:29:26.82:0,27,261	1/1:18,0:24:2.03:27,2,0	1/1:21,0:13:5.89:37,6,0	./.	1/1:40,0:33:5.88:52,6,0	1/1:30,0:28:3.01:44,3,0	1/1:9,0:9:3:26,3,0	1/1:34,0:30:2.99:24,3,0	0/0:21,0:20:2.26:0,2,10	1/1:26,0:21:2.36:25,2,0	1/1:21,1:21:11.44:132,11,0	1/1:9,0:8:12.71:83,13,0
chr10	91036093	.	C	CTT	13784.54	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-15.892;DP=656;FS=5.257;HRun=1;HaplotypeScore=74.4532;InbreedingCoeff=0.9881;MQ=89.49;MQ0=1;MQRankSum=-0.854;QD=52.81;ReadPosRankSum=1.142;VQSLOD=4.6182;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:83.87:0,84,1322	0/0:5,0:5:15.03:0,15,218	0/0:20,0:21:46.43:0,46,788	0/0:28,0:28:68.33:0,68,1014	1/1:0,17:17:51.18:1035,51,0	0/0:26,0:26:78.25:0,78,1238	0/0:26,0:26:75.26:0,75,1215	1/1:1,35:39:99:2000,114,0	1/1:3,19:22:54.19:1097,54,0	0/0:20,0:20:60.17:0,60,929	0/0:14,0:14:42.07:0,42,597	1/1:0,32:31:81.28:1646,81,0	0/0:25,0:25:72.23:0,72,1136	1/1:0,22:22:54.19:1092,54,0	0/0:26,0:26:78.24:0,78,1217	0/0:28,0:28:81.18:0,81,1234	0/0:36,0:36:99:0,102,1542	0/0:30,0:30:84.20:0,84,1306	1/1:0,19:19:57.13:976,57,0	1/1:0,12:12:36.03:649,36,0	1/1:0,46:48:99:2721,135,0	0/0:12,0:12:36.07:0,36,490	0/0:16,0:16:48.15:0,48,734	0/0:37,0:37:99:0,108,1729	0/0:14,0:14:42.03:0,42,601	1/1:1,18:19:8.41:1048,8,0	1/1:1,18:20:45.15:914,45,0	1/1:0,11:11:30.10:609,30,0
chr10	91036786	.	GGTCCCAGT	G	13009.50	PASS	AB=0.514;AC=21;AF=0.375;AN=56;BaseQRankSum=15.366;DP=616;FS=3.967;HRun=0;HaplotypeScore=173.2262;InbreedingCoeff=0.8810;MQ=78.60;MQ0=0;MQRankSum=-15.943;QD=62.85;ReadPosRankSum=-0.537;VQSLOD=4.1988;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.29:0,90,3604	0/0:11,0:11:27.09:0,27,1092	0/0:27,0:26:68.70:0,69,2199	0/0:13,0:13:35.61:0,36,947	1/1:0,17:17:33.09:847,33,0	0/0:19,0:19:54.17:0,54,2180	0/0:29,0:29:87.28:0,87,3363	1/1:5,21:26:57.19:1312,57,0	1/1:0,20:20:54.19:1508,54,0	0/0:29,0:29:84.29:0,84,3686	0/0:2,0:2:6.02:0,6,175	1/1:3,36:39:99:2768,99,0	0/0:36,0:36:99:0,105,4386	1/1:1,33:34:78.27:2180,78,0	0/0:44,0:44:99:0,132,5593	0/0:25,0:25:72.25:0,72,3096	0/0:40,0:40:99:0,111,4661	0/0:24,0:24:69.24:0,69,3029	1/1:1,12:13:36.12:1007,36,0	1/1:1,11:12:24.08:671,24,0	1/1:2,13:15:18.01:495,18,0	0/0:14,0:14:42.13:0,42,1559	0/0:12,0:12:33.11:0,33,1292	0/0:24,0:24:69.24:0,69,2891	0/0:29,0:29:84.29:0,84,3503	0/1:1,18:19:71.56:1215,0,72	1/1:0,11:11:33.11:923,33,0	1/1:0,1:1:3.01:84,3,0
chr10	91037139	.	CTGTG	C	3068.11	PASS	AB=0.911;AC=27;AF=0.519;AN=52;BaseQRankSum=8.061;DP=751;FS=1.730;HRun=0;HaplotypeScore=137.1207;InbreedingCoeff=0.6775;MQ=62.84;MQ0=16;MQRankSum=-1.312;QD=7.58;ReadPosRankSum=1.464;VQSLOD=2.5902;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:43:12.54:0,13,281	0/0:14,0:15:15.85:0,16,267	./.	./.	0/0:19,0:21:14.23:0,14,227	1/1:10,4:14:3.01:47,3,0	1/1:24,6:32:17.97:232,18,0	0/0:26,0:25:17.73:0,18,294	0/0:29,2:33:0.73:0,1,714	1/1:24,8:34:26.70:424,27,0	1/1:10,0:10:8.78:88,9,0	0/0:20,0:24:26.83:0,27,576	1/1:14,5:21:17.94:243,18,0	0/1:32,1:34:2.02:2,0,743	1/1:23,13:36:29.95:418,30,0	1/1:13,14:30:48.14:686,48,0	0/0:30,0:33:41.84:0,42,850	1/1:11,8:18:20.94:296,21,0	0/0:18,0:17:11.07:0,11,196	0/0:16,0:16:18.05:0,18,325	0/1:64,1:66:11.90:12,0,917	1/1:10,7:18:14.81:215,15,0	1/1:12,4:16:2.84:47,3,0	1/1:15,12:30:17.40:357,17,0	1/1:16,8:25:12.03:168,12,0	0/0:25,0:25:31.35:0,31,633	0/1:14,1:18:29.80:30,0,214	0/0:6,0:8:17.79:0,18,304
chr10	91038760	.	GGTGT	G	2359.71	PASS	AB=0.901;AC=18;AF=0.360;AN=50;BaseQRankSum=-1.882;DP=612;FS=17.168;HRun=0;HaplotypeScore=112.0889;InbreedingCoeff=0.7349;MQ=54.91;MQ0=17;MQRankSum=0.681;QD=11.03;ReadPosRankSum=2.444;VQSLOD=2.1497;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:35.81:0,36,569	0/0:2,0:2:3.01:0,3,71	./.	0/0:24,0:13:0.47:0,0,1	0/0:21,0:18:18.06:0,18,340	1/1:18,6:24:24.54:355,25,0	1/1:14,3:16:14.76:189,15,0	0/0:30,0:29:14.93:0,15,156	0/0:18,0:18:27.05:0,27,413	./.	./.	0/0:13,0:15:18.05:0,18,281	1/1:7,4:14:8.74:230,9,0	0/0:18,0:18:21.01:0,21,279	0/0:20,0:26:17.53:0,18,274	1/1:19,6:28:33.18:409,33,0	0/1:35,0:36:10.89:11,0,476	1/1:9,6:17:20.61:407,21,0	0/0:27,0:25:12.94:0,13,179	0/0:17,0:18:12.04:0,12,240	0/0:58,0:57:30.10:0,30,583	1/1:13,1:17:24.01:268,24,0	1/1:9,3:11:9.03:140,9,0	0/1:24,5:29:73.76:238,0,74	1/1:12,4:16:22.28:299,22,0	0/0:23,0:24:19.82:0,20,285	0/0:23,0:27:41.42:0,41,675	0/0:10,0:16:12.03:0,12,193
chr10	91038840	.	TG	T	8830.27	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=6.619;DP=521;FS=2.293;HRun=7;HaplotypeScore=76.3108;InbreedingCoeff=0.9861;MQ=87.76;MQ0=0;MQRankSum=-5.231;QD=23.48;ReadPosRankSum=2.574;VQSLOD=5.2157;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.23:0,81,982	0/0:8,0:8:21.07:0,21,264	0/0:23,0:23:51.14:0,51,599	0/0:25,0:25:52.04:0,52,627	1/1:2,5:7:15.03:149,15,0	1/1:5,11:16:33.07:337,33,0	1/1:3,31:33:66.14:673,66,0	1/1:4,17:21:45.09:459,45,0	1/1:2,27:29:75.16:765,75,0	1/1:3,9:12:30.05:295,30,0	1/1:1,5:6:18.04:182,18,0	1/1:1,12:13:30.03:305,30,0	1/1:4,17:21:45.09:459,45,0	1/1:2,9:11:24.05:245,24,0	0/0:28,0:28:75.22:0,75,913	1/1:5,25:30:66.14:673,66,0	0/0:32,0:32:90.28:0,90,1118	1/1:6,10:16:27.05:275,27,0	1/1:0,11:11:30.05:299,30,0	1/1:3,7:10:24.05:243,24,0	1/1:5,25:30:72.14:728,72,0	1/1:2,10:12:27.06:275,27,0	1/1:1,10:11:30.07:306,30,0	1/1:3,34:37:90.20:918,90,0	1/1:3,13:16:36.07:364,36,0	1/1:0,9:9:27.06:275,27,0	1/1:3,17:20:48.10:490,48,0	1/1:1,3:4:12:114,12,0
chr10	91038847	.	GT	G	1838.87	PASS	AB=0.993;AC=35;AF=0.625;AN=56;BaseQRankSum=13.480;DP=501;FS=3.610;HRun=1;HaplotypeScore=88.6167;InbreedingCoeff=0.2738;MQ=90.77;MQ0=0;MQRankSum=-2.781;QD=5.08;ReadPosRankSum=6.269;VQSLOD=0.7321;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.27:0,81,1173	0/0:7,0:7:21.07:0,21,307	0/0:20,0:20:57.18:0,57,813	0/0:25,0:25:69.10:0,69,861	1/1:5,1:6:13:79,13,0	1/1:12,0:12:3.27:50,3,0	0/1:36,0:35:70.02:116,0,70	0/1:21,0:21:39.97:40,0,90	1/1:28,0:28:39.74:216,40,0	1/1:10,0:10:12.87:46,13,0	1/1:7,1:8:15.15:84,15,0	0/1:15,0:15:21.25:38,0,21	1/1:19,0:19:13.49:102,13,0	0/1:10,0:10:2.95:42,0,3	0/0:27,0:27:75.23:0,75,1070	0/1:28,0:28:9.86:144,0,10	0/0:33,0:33:96.28:0,96,1354	0/1:15,1:16:51.13:51,0,80	0/1:12,0:12:8.93:23,0,9	1/1:7,1:8:19.97:110,20,0	1/1:27,0:27:39.38:185,39,0	1/1:11,0:11:0.54:84,1,0	1/1:10,0:10:23.26:93,23,0	0/1:39,0:39:18.86:176,0,19	1/1:14,0:14:26.92:88,27,0	0/1:11,0:11:26.18:86,0,26	1/1:17,0:17:38.62:158,39,0	1/1:4,0:4:5:16,5,0
chr10	91042233	.	T	TG	6491.07	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-13.387;DP=543;FS=0.340;HRun=0;HaplotypeScore=53.9923;InbreedingCoeff=0.9802;MQ=69.50;MQ0=1;MQRankSum=0.621;QD=33.12;ReadPosRankSum=1.319;VQSLOD=4.2850;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.15:0,87,1083	0/0:9,0:9:27.02:0,27,319	0/0:28,0:14:23.67:0,24,209	0/0:16,0:10:14.74:0,15,137	1/1:0,17:17:47.94:567,48,0	0/0:21,0:20:63.15:0,63,812	0/0:15,0:15:45.12:0,45,606	1/1:0,25:25:75.12:897,75,0	1/1:0,17:17:48.16:637,48,0	0/0:20,0:20:56.89:0,57,671	0/0:23,0:23:65.45:0,65,836	1/1:0,17:17:39.13:517,39,0	0/0:15,0:15:45.12:0,45,580	1/1:0,12:12:21.07:279,21,0	0/0:27,0:27:78.21:0,78,1021	0/0:25,0:25:69.18:0,69,893	0/0:15,0:15:40.74:0,41,524	0/0:23,0:23:69.08:0,69,860	1/1:2,18:20:38.24:652,38,0	1/1:0,15:15:44.82:494,45,0	1/1:0,15:15:39.13:518,39,0	0/0:10,0:10:19.13:0,19,334	0/0:17,0:17:46.75:0,47,561	0/0:26,0:26:69.61:0,70,982	0/0:28,0:28:80.41:0,80,1020	1/1:0,22:22:66.06:779,66,0	1/1:1,32:33:80.85:1073,81,0	1/1:1,2:3:5.89:79,6,0
chr10	91042797	.	CG	C	2465.03	PASS	AB=0.929;AC=31;AF=0.620;AN=50;BaseQRankSum=-2.187;DP=208;FS=0.000;HRun=1;HaplotypeScore=39.5543;InbreedingCoeff=0.3297;MQ=78.82;MQ0=0;MQRankSum=-0.456;QD=14.85;ReadPosRankSum=-2.941;VQSLOD=1.9097;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:24.06:0,24,313	0/0:3,0:3:5.99:0,6,64	0/0:10,0:10:24.58:0,25,242	0/0:2,0:2:5.17:0,5,20	./.	1/1:6,1:7:2.91:100,3,0	0/1:20,0:20:43.71:46,0,44	1/1:0,5:5:12:142,12,0	1/1:0,3:3:6.02:83,6,0	1/1:7,0:7:9.32:91,9,0	./.	1/1:0,7:7:8.94:101,9,0	1/1:7,0:7:3.06:85,3,0	1/1:0,6:6:11.99:129,12,0	0/0:5,0:5:14.99:0,15,171	0/1:4,0:4:8.69:17,0,9	0/0:12,0:12:33.04:0,33,427	0/1:12,0:12:9.95:103,0,10	1/1:0,6:6:15.05:209,15,0	0/1:0,2:2:0:0,0,0	1/1:2,41:43:69.69:946,70,0	./.	0/1:4,0:4:16.40:19,0,16	0/1:12,0:12:25.19:75,0,25	0/1:6,0:6:16.10:19,0,16	1/1:3,6:9:20.89:238,21,0	1/1:2,2:4:12:146,12,0	1/1:0,2:2:6.02:84,6,0
chr10	91045367	.	TAA	T	3482.61	PASS	AB=0.630;AC=21;AF=0.375;AN=56;BaseQRankSum=0.149;DP=547;FS=1.258;HRun=14;HaplotypeScore=78.4925;InbreedingCoeff=0.9178;MQ=67.90;MQ0=3;MQRankSum=-0.345;QD=16.74;ReadPosRankSum=4.761;VQSLOD=3.0846;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:74.69:0,75,958	0/0:10,0:11:29.68:0,30,362	0/0:26,0:11:20.92:0,21,186	0/0:18,0:6:8.72:0,9,81	1/1:5,14:20:44.96:407,45,0	0/0:13,0:13:39.13:0,39,542	0/0:16,0:17:32.60:0,33,427	1/1:4,19:26:38.24:371,38,0	1/1:4,11:15:23.97:222,24,0	0/0:20,0:20:57.04:0,57,706	0/0:17,0:19:41.61:0,42,520	1/1:0,17:19:23.63:253,24,0	0/0:11,0:11:30.03:0,30,350	1/1:2,18:20:42.03:388,42,0	0/0:21,0:21:48.61:0,49,634	0/0:18,0:18:51.17:0,51,712	0/0:22,0:28:71.34:0,71,864	0/0:24,0:25:65.62:0,66,807	1/1:8,7:14:20.91:194,21,0	1/1:7,17:24:48.23:438,48,0	1/1:1,11:12:27.02:250,27,0	0/0:15,0:17:31.56:0,32,362	0/0:22,0:27:58.73:0,59,692	0/0:8,0:10:26.55:0,27,314	0/0:24,0:27:74.16:0,74,895	0/1:7,8:17:9.62:212,0,10	1/1:5,30:35:65.93:611,66,0	1/1:0,5:5:15.02:139,15,0
chr10	91045599	.	TCAC	T	8929.75	PASS	AB=0.929;AC=23;AF=0.411;AN=56;BaseQRankSum=12.809;DP=642;FS=0.667;HRun=0;HaplotypeScore=101.9579;InbreedingCoeff=0.9263;MQ=86.74;MQ0=0;MQRankSum=-4.614;QD=35.58;ReadPosRankSum=4.286;VQSLOD=5.2666;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,2424	0/0:19,0:19:54.19:0,54,1183	0/0:23,0:23:46.07:0,46,1168	0/0:26,0:26:61.73:0,62,1151	0/0:16,0:16:42.06:0,42,881	1/1:1,21:22:54.18:897,54,0	1/1:2,19:21:57.19:948,57,0	0/0:35,0:35:87.30:0,87,1969	0/0:13,0:13:39.13:0,39,853	1/1:1,18:19:54.17:873,54,0	1/1:0,9:9:24.08:399,24,0	0/0:20,0:20:54.19:0,54,1220	1/1:1,20:21:51.17:848,51,0	0/0:19,0:19:54.19:0,54,1181	0/0:14,0:14:39.13:0,39,881	1/1:4,21:25:48.16:798,48,0	0/0:39,0:39:99:0,117,2640	1/1:0,16:16:45.15:748,45,0	0/0:19,0:19:51.18:0,51,1139	0/0:29,1:30:34.48:0,34,1767	0/0:42,0:42:99:0,120,2674	1/1:0,17:17:39.13:648,39,0	1/1:1,18:19:35.96:598,36,0	1/1:1,31:32:75.73:1249,76,0	1/1:0,24:24:54.18:899,54,0	0/1:24,2:26:21.41:21,0,1552	0/0:25,0:25:72.25:0,72,1627	0/0:10,0:10:30.10:0,30,676
chr10	91045732	.	TTC	T	10626.03	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.964;DP=680;FS=3.815;HRun=0;HaplotypeScore=88.6444;InbreedingCoeff=0.9960;MQ=89.37;MQ0=0;MQRankSum=-6.627;QD=40.10;ReadPosRankSum=2.954;VQSLOD=6.9029;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1854	0/0:9,0:9:27.09:0,27,506	0/0:27,0:27:77.07:0,77,1372	0/0:28,0:27:65.77:0,66,1101	0/0:27,0:27:81.28:0,81,1505	1/1:0,18:18:51.17:751,51,0	1/1:0,21:21:60.20:884,60,0	0/0:30,0:30:84.29:0,84,1565	0/0:17,0:17:51.17:0,51,955	1/1:0,22:22:66.22:972,66,0	1/1:3,29:32:90.30:1315,90,0	0/0:25,0:25:72.25:0,72,1348	1/1:0,20:20:57.19:839,57,0	0/0:24,0:24:69.21:0,69,1242	0/0:21,0:21:63.22:0,63,1179	1/1:1,23:24:13.03:916,13,0	0/0:36,0:36:99:0,108,1992	1/1:0,30:30:87.29:1281,87,0	0/0:21,0:21:60.20:0,60,1075	0/0:22,0:22:66.23:0,66,1236	0/0:33,0:33:93.31:0,93,1711	1/1:2,21:23:54.18:795,54,0	1/1:0,25:25:72.24:1060,72,0	1/1:2,28:30:75.25:1104,75,0	1/1:1,19:20:48.16:707,48,0	0/0:28,1:29:43.14:0,43,1529	0/0:22,0:22:66.21:0,66,1205	0/0:8,0:8:24.08:0,24,449
chr10	91046825	.	G	GT	9753.32	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=19.206;DP=699;FS=4.839;HRun=1;HaplotypeScore=102.0221;InbreedingCoeff=0.9566;MQ=81.37;MQ0=0;MQRankSum=0.317;QD=33.52;ReadPosRankSum=2.891;VQSLOD=4.6232;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1766	0/0:10,0:10:30:0,30,345	0/0:18,0:18:43.73:0,44,603	0/0:21,0:20:45.50:0,46,515	0/0:20,0:20:60.18:0,60,796	1/1:1,26:27:60.19:821,60,0	1/1:0,27:26:75.25:1020,75,0	0/0:21,0:21:57.17:0,57,747	0/0:28,0:28:84.19:0,84,1092	1/1:1,19:20:56.20:728,56,0	1/1:0,16:16:45.15:612,45,0	0/0:45,0:45:99:0,129,1709	1/1:0,32:31:78.26:1065,78,0	0/0:24,0:24:72.23:0,72,964	0/0:31,0:31:90.26:0,90,1190	1/1:0,35:35:87.29:1189,87,0	0/0:28,0:28:75.21:0,75,994	1/1:0,18:17:48.11:635,48,0	0/0:23,0:23:60.04:0,60,702	0/0:11,0:11:30.09:0,30,394	0/0:48,0:48:99:0,135,1805	1/1:0,24:24:66.22:900,66,0	1/1:0,21:21:53.86:740,54,0	1/1:1,38:38:90.28:1222,90,0	1/1:0,25:25:60.20:819,60,0	0/0:22,0:22:62.86:0,63,818	0/0:13,0:13:39.10:0,39,509	0/1:7,0:7:1.46:1,0,169
chr10	91048517	.	TTC	T	7728.70	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=7.812;DP=595;FS=3.367;HRun=0;HaplotypeScore=93.2190;InbreedingCoeff=0.9975;MQ=70.05;MQ0=1;MQRankSum=-1.507;QD=35.29;ReadPosRankSum=5.483;VQSLOD=6.6995;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:87.18:0,87,1369	0/0:16,0:16:42.05:0,42,571	0/0:18,0:18:40.26:0,40,679	0/0:17,0:15:38.28:0,38,617	0/0:18,0:17:48.13:0,48,762	1/1:0,15:15:36.12:549,36,0	1/1:0,8:8:15.05:218,15,0	0/0:34,0:34:99:0,102,1656	0/0:21,0:21:42.11:0,42,684	1/1:0,35:35:99:1507,105,0	1/1:4,22:26:57.11:802,57,0	0/0:14,0:14:33.07:0,33,474	1/1:0,17:17:33.11:504,33,0	0/0:14,0:14:42.04:0,42,585	0/0:41,0:41:99:0,117,1966	1/1:0,24:24:48.16:734,48,0	0/0:23,0:23:66.19:0,66,1098	1/1:0,15:14:33.11:501,33,0	0/0:23,0:23:66.17:0,66,1052	0/0:18,0:18:53.49:0,53,773	0/0:12,0:12:33.05:0,33,441	1/1:1,16:17:45.11:659,45,0	1/1:1,23:24:62.85:946,63,0	1/1:1,20:21:50.16:714,50,0	1/1:0,17:17:39.13:596,39,0	0/0:28,0:28:84.27:0,84,1416	0/0:30,0:29:78.10:0,78,1133	0/0:17,0:17:39.09:0,39,627
chr10	91048539	.	TAC	T	2613.08	PASS	AB=0.847;AC=27;AF=0.519;AN=52;BaseQRankSum=1.259;DP=596;FS=5.084;HRun=0;HaplotypeScore=112.9172;InbreedingCoeff=0.2639;MQ=61.93;MQ0=10;MQRankSum=-0.262;QD=7.20;ReadPosRankSum=-0.078;VQSLOD=2.9618;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:33:0.64:0,1,671	0/1:8,2:10:35.55:36,0,108	./.	./.	1/1:8,8:16:14.99:225,15,0	0/1:16,3:18:50.16:50,0,308	0/1:16,1:18:3.61:4,0,335	1/1:18,6:24:15.04:161,15,0	0/1:7,16:23:21.31:210,0,21	0/1:38,2:37:14.73:15,0,528	0/1:19,1:21:18.32:18,0,152	1/1:4,18:23:38.93:407,39,0	0/0:19,0:19:30.10:0,30,439	1/1:7,3:10:15.03:159,15,0	0/0:41,3:43:2.32:0,2,828	0/0:25,1:26:36.10:0,36,505	0/1:17,0:17:8.05:8,0,247	0/0:15,0:14:21.05:0,21,291	1/1:14,2:16:14.87:146,15,0	1/1:7,13:21:28.20:263,28,0	1/1:5,12:17:18.05:200,18,0	0/0:21,0:21:37.12:0,37,448	0/1:23,2:24:13.25:13,0,217	0/0:21,1:22:9.71:0,10,429	0/0:17,0:17:32.47:0,32,457	1/1:6,17:24:53.31:535,53,0	1/1:10,11:21:20.89:213,21,0	0/1:5,8:15:25.92:132,0,26
chr10	91048947	.	A	AC	13636.07	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-16.616;DP=862;FS=4.695;HRun=0;HaplotypeScore=77.0273;InbreedingCoeff=0.9998;MQ=86.06;MQ0=0;MQRankSum=-3.209;QD=43.85;ReadPosRankSum=2.687;VQSLOD=5.4656;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,181,2456	0/0:10,0:10:30.10:0,30,420	0/0:37,0:37:99:0,105,1434	0/0:18,0:18:51.15:0,51,665	0/0:30,0:30:87.27:0,87,1172	1/1:1,23:24:66.22:1054,66,0	1/1:1,40:41:99:1678,105,0	0/0:35,0:35:96.31:0,96,1328	0/0:34,0:34:99:0,102,1410	1/1:0,26:26:66.22:1055,66,0	1/1:0,15:15:36.12:575,36,0	0/0:39,0:39:99:0,117,1599	1/1:0,24:24:66.23:1055,66,0	0/0:35,0:35:99:0,99,1334	0/0:37,0:37:99:0,111,1537	1/1:0,41:41:99:1966,123,0	0/0:47,0:47:99:0,135,1846	1/1:0,28:28:78.27:1239,78,0	0/0:18,0:18:54.17:0,54,737	0/0:29,0:29:87.29:0,87,1217	0/0:54,0:54:99:0,163,2230	1/1:0,23:24:66.22:1037,66,0	1/1:0,24:24:72.25:1149,72,0	1/1:1,39:40:99:1821,114,0	1/1:0,24:24:63.21:1007,63,0	0/0:26,1:27:33.29:0,33,1043	0/0:30,0:30:90.29:0,90,1241	0/0:10,0:10:30.10:0,30,419
chr10	91049106	.	T	TG	11919.31	PASS	AB=0.909;AC=23;AF=0.411;AN=56;BaseQRankSum=-19.224;DP=756;FS=1.217;HRun=0;HaplotypeScore=68.0118;InbreedingCoeff=0.9262;MQ=79.87;MQ0=0;MQRankSum=-1.255;QD=40.68;ReadPosRankSum=1.230;VQSLOD=5.5030;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,178,2469	0/0:15,0:15:45.14:0,45,614	0/0:22,0:22:60.12:0,60,775	0/0:16,0:15:39.09:0,39,508	0/0:31,0:31:93.31:0,93,1300	1/1:0,25:25:72.25:1151,72,0	1/1:1,28:29:72.25:1151,72,0	0/0:19,0:19:57.19:0,57,797	0/0:21,0:21:60.20:0,60,839	1/1:0,32:32:93.31:1458,93,0	1/1:0,21:21:60.20:959,60,0	0/0:31,0:31:93.26:0,93,1263	1/1:0,13:13:39.13:623,39,0	0/0:33,0:33:96.32:0,96,1343	0/0:33,0:33:99:0,99,1380	1/1:0,26:26:75.26:1199,75,0	0/0:41,0:41:99:0,123,1702	1/1:0,21:21:54.18:863,54,0	0/0:27,0:27:81.26:0,81,1119	0/0:24,0:24:72.24:0,72,1007	0/0:40,0:40:99:0,120,1636	1/1:0,25:25:75.26:1199,75,0	1/1:0,21:21:63.21:1007,63,0	1/1:1,27:28:75.26:1199,75,0	1/1:0,22:22:66.23:1055,66,0	0/1:27,3:30:53.68:54,0,1028	0/0:35,0:34:99:0,105,1468	0/0:16,0:16:48.16:0,48,671
chr10	91049731	.	GGT	G	756.18	PASS	AB=0.979;AC=18;AF=0.321;AN=56;BaseQRankSum=-5.588;DP=466;FS=1.376;HRun=0;HaplotypeScore=113.5776;InbreedingCoeff=0.1699;MQ=70.61;MQ0=2;MQRankSum=1.745;QD=3.92;ReadPosRankSum=1.635;VQSLOD=2.8337;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:9.65:10,0,286	0/1:4,0:4:15.75:16,0,19	0/0:22,0:18:37.34:0,37,359	0/1:11,0:10:1.62:2,0,116	1/1:9,0:9:2.75:59,3,0	0/0:22,0:22:34.05:0,34,137	0/0:25,0:25:25.09:0,25,121	0/1:16,0:16:32.90:33,0,40	0/1:17,1:17:20.82:96,0,21	0/0:21,0:21:31.03:0,31,139	0/0:15,0:15:22.59:0,23,69	0/1:16,1:17:12.16:75,0,12	0/0:24,0:24:31.62:0,32,112	1/1:14,0:14:31.78:119,32,0	0/0:12,0:12:26.09:0,26,340	0/0:19,0:19:45.88:0,46,190	0/0:29,0:29:55.61:0,56,642	0/0:17,0:17:34.02:0,34,141	0/1:9,0:9:11.01:37,0,11	1/1:9,2:11:8.08:111,8,0	0/1:25,1:26:76.23:76,0,82	0/0:20,0:20:27.99:0,28,98	0/0:5,0:5:7.65:0,8,23	0/0:23,0:23:44.04:0,44,141	0/0:19,0:19:35.81:0,36,117	0/1:14,1:15:24.87:85,0,25	0/1:15,0:15:16.11:71,0,16	1/1:12,1:12:29.95:141,30,0
chr10	91049733	.	TGGGGG	T	8840.06	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-6.919;DP=487;FS=12.630;HRun=12;HaplotypeScore=115.3619;InbreedingCoeff=0.9843;MQ=69.02;MQ0=2;MQRankSum=-4.212;QD=42.10;ReadPosRankSum=5.612;VQSLOD=2.2153;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:66.23:0,66,1507	0/0:4,0:4:9.03:0,9,200	0/0:21,0:17:35.96:0,36,607	0/0:8,0:9:11.86:0,12,124	0/0:3,0:9:27.07:0,27,292	1/1:3,19:22:45.13:779,45,0	1/1:4,19:23:48.14:827,48,0	0/0:3,0:15:39.09:0,39,414	0/0:4,0:16:38.77:0,39,421	1/1:1,20:21:57.18:1004,57,0	1/1:0,15:15:42.14:717,42,0	0/0:4,0:19:36.09:0,36,401	1/1:2,23:25:50.85:897,51,0	0/0:4,0:14:35.83:0,36,360	0/0:18,0:18:48.16:0,48,1142	1/1:5,15:20:51.14:899,51,0	0/0:29,0:35:78.26:0,78,1780	1/1:4,13:17:45.14:788,45,0	0/0:3,0:9:24.05:0,24,250	0/0:3,0:12:33.09:0,33,358	0/0:8,0:25:45.11:0,45,500	1/1:2,18:20:42.04:722,42,0	1/1:0,5:5:15.05:264,15,0	1/1:1,22:23:60.21:1058,60,0	1/1:0,19:19:51.17:884,51,0	0/0:5,0:16:41.77:0,42,447	0/0:5,0:15:39.10:0,39,430	0/0:7,0:12:36.09:0,36,385
chr10	91049828	.	TA	T	3735.23	PASS	AB=0.973;AC=23;AF=0.411;AN=56;BaseQRankSum=-3.683;DP=641;FS=1.986;HRun=12;HaplotypeScore=100.6894;InbreedingCoeff=0.9245;MQ=77.49;MQ0=4;MQRankSum=1.119;QD=14.20;ReadPosRankSum=3.652;VQSLOD=4.0830;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:28:46.43:0,46,562	0/0:8,0:8:24.03:0,24,236	0/1:35,1:18:6.02:6,0,119	0/0:23,0:18:10.70:0,11,108	1/1:1,21:23:64.80:493,65,0	0/0:5,0:18:39.99:0,40,209	0/0:5,0:19:31.40:0,31,168	1/1:9,17:27:41.30:308,41,0	1/1:4,17:20:44.81:348,45,0	0/0:18,0:29:64.38:0,64,388	0/0:9,0:24:64.94:0,65,339	1/1:2,20:22:23.35:364,23,0	0/0:11,0:20:46.72:0,47,251	1/1:0,15:17:34.91:261,35,0	0/0:28,0:28:48.95:0,49,671	0/0:4,0:25:42.73:0,43,231	0/0:33,3:36:12.16:0,12,749	0/0:4,0:29:54.14:0,54,289	1/1:8,13:21:11.37:268,11,0	1/1:2,21:24:55.75:421,56,0	1/1:1,9:10:20.85:162,21,0	0/0:8,0:20:48.30:0,48,265	0/0:4,0:28:50.64:0,51,258	0/0:9,0:22:57.67:0,58,347	0/0:12,0:20:49.86:0,50,275	1/1:2,15:21:50.93:365,51,0	1/1:2,22:25:60.84:453,61,0	1/1:2,13:16:37.88:284,38,0
chr10	91050371	.	T	TTG	12154.15	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-2.853;DP=836;FS=10.927;HRun=0;HaplotypeScore=104.8637;InbreedingCoeff=0.9979;MQ=68.12;MQ0=2;MQRankSum=-0.269;QD=40.65;ReadPosRankSum=2.342;VQSLOD=6.4070;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,114,1452	0/0:7,0:7:18.06:0,18,231	0/0:27,0:26:59.50:0,59,767	0/0:21,0:18:36.08:0,36,450	0/0:27,0:27:78.25:0,78,1003	1/1:2,14:17:36.12:607,36,0	1/1:5,39:44:99:1871,111,0	0/0:30,0:30:63.19:0,63,796	0/0:27,0:27:78.24:0,78,989	1/1:3,23:27:72.25:1189,72,0	1/1:1,8:10:24.08:405,24,0	0/0:36,0:36:90.29:0,90,1158	1/1:7,31:39:77.84:1279,78,0	0/0:33,0:33:87.24:0,87,1076	0/0:45,0:45:99:0,120,1517	1/1:4,32:36:90.31:1519,90,0	0/0:48,0:48:99:0,117,1487	1/1:4,20:23:63.18:1024,63,0	0/0:30,0:30:75.23:0,75,952	0/0:20,0:20:54.15:0,54,695	0/0:82,0:82:99:0,210,2687	1/1:1,18:20:57.20:960,57,0	1/1:4,19:24:21.59:909,22,0	1/1:3,36:38:60.72:1580,61,0	1/1:2,17:19:48.16:810,48,0	0/0:31,1:32:30.62:0,31,941	0/0:15,0:15:42.14:0,42,540	0/0:11,0:11:33.11:0,33,423
chr10	91050806	.	TTCACAGGCCCCTCTCCCATTAGCTCTCA	T	8316.72	PASS	AC=36;AF=0.750;AN=48;BaseQRankSum=7.016;DP=465;FS=5.495;HRun=0;HaplotypeScore=317.4562;InbreedingCoeff=0.6437;MQ=75.50;MQ0=0;MQRankSum=-6.038;QD=32.11;ReadPosRankSum=2.538;VQSLOD=2.7784;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:48.16:0,48,5287	0/0:14,0:14:34.36:0,34,2751	0/0:29,0:29:39.60:0,40,1371	0/0:32,0:32:35.91:0,36,1399	./.	1/1:5,4:9:3.01:216,3,0	1/1:14,0:14:3.01:109,3,0	1/1:18,0:18:3:27,3,0	1/1:10,3:13:6.02:432,6,0	./.	1/1:10,0:10:6.02:227,6,0	1/1:9,5:14:9.03:648,9,0	1/1:8,6:14:12.04:861,12,0	1/1:12,5:17:3.01:216,3,0	0/0:40,0:40:84.29:0,84,8790	1/1:10,3:13:6.02:432,6,0	0/0:23,0:23:39.13:0,39,4484	1/1:12,0:12:3.01:138,3,0	./.	1/1:6,12:18:30.10:1912,30,0	1/1:28,0:28:3.01:46,3,0	1/1:10,7:17:8.99:452,9,0	1/1:6,4:10:3.01:206,3,0	1/1:9,0:9:3.01:42,3,0	./.	1/1:12,6:18:18.05:414,18,0	1/1:10,5:15:6.02:432,6,0	1/1:3,7:10:21.07:1508,21,0
chr10	91050835	.	T	TG	328.58	PASS	AB=0.925;AC=8;AF=0.143;AN=56;BaseQRankSum=2.430;DP=338;FS=6.121;HRun=0;HaplotypeScore=125.6218;InbreedingCoeff=-0.1416;MQ=83.30;MQ0=0;MQRankSum=-0.740;QD=4.98;ReadPosRankSum=-2.117;VQSLOD=2.3026;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.26:0,84,1155	0/0:13,0:13:39.13:0,39,544	0/0:39,0:39:99:0,111,1515	0/0:25,0:25:75.23:0,75,997	0/0:8,0:8:10.70:0,11,74	0/0:5,0:5:5.20:0,5,28	0/1:3,1:4:9.22:56,0,9	0/1:6,0:6:11.08:11,0,38	0/0:7,0:7:15.74:0,16,85	0/0:4,0:4:9.88:0,10,84	0/1:3,2:5:61.10:66,0,61	0/0:10,0:10:18.59:0,19,107	0/0:8,0:8:14.24:0,14,57	0/0:10,0:10:10.69:0,11,60	0/0:41,0:41:99:0,120,1677	0/0:4,0:4:7.44:0,7,39	0/0:21,0:21:63.19:0,63,863	0/1:7,1:8:72.62:73,0,76	0/0:2,0:2:2.22:0,2,7	0/1:14,0:14:2.99:3,0,89	0/1:15,0:15:52.31:167,0,52	0/0:9,0:9:7.77:0,8,48	0/0:8,0:8:10.20:0,10,51	0/1:5,0:5:31.23:31,0,40	0/0:7,0:7:16.80:0,17,137	0/1:9,0:9:50.34:50,0,60	0/0:12,0:12:24.83:0,25,152	0/0:9,0:9:15.97:0,16,51
chr10	91051258	.	G	GTC	10109.23	PASS	AB=0.549;AC=21;AF=0.375;AN=56;BaseQRankSum=-16.501;DP=851;FS=0.000;HRun=0;HaplotypeScore=125.9373;InbreedingCoeff=0.9170;MQ=57.40;MQ0=36;MQRankSum=2.026;QD=29.82;ReadPosRankSum=3.428;VQSLOD=6.5516;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,1900	0/0:5,0:5:15.01:0,15,181	0/0:66,0:20:41.23:0,41,597	0/0:52,0:21:48.43:0,48,649	1/1:0,23:23:39.13:738,39,0	0/0:28,0:28:72.21:0,72,1004	0/0:25,0:25:48.05:0,48,827	1/1:3,45:43:91.27:1621,91,0	1/1:2,32:34:39.13:751,39,0	0/0:20,0:19:54.16:0,54,722	0/0:13,0:13:27.08:0,27,359	1/1:2,29:31:64.03:1172,64,0	0/0:32,0:32:86.13:0,86,1139	1/1:3,33:36:23.09:943,23,0	0/0:41,0:41:99:0,110,1561	0/0:36,0:36:93.28:0,93,1263	0/0:32,0:32:80.91:0,81,1078	0/0:30,0:30:78.19:0,78,948	1/1:9,15:22:42.05:585,42,0	1/1:0,19:18:24.08:462,24,0	1/1:4,50:55:84.28:1596,84,0	0/0:18,0:18:42.14:0,42,582	0/0:14,0:14:36.06:0,36,441	0/0:36,0:36:99:0,101,1308	0/0:17,0:17:36.12:0,36,510	0/1:5,23:26:58.10:1012,0,58	1/1:0,28:26:42.11:780,42,0	1/1:1,9:10:13.15:448,13,0
chr10	91051602	.	TA	T	4930.09	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=13.615;DP=572;FS=5.852;HRun=8;HaplotypeScore=53.1162;InbreedingCoeff=0.9972;MQ=68.10;MQ0=0;MQRankSum=-1.853;QD=24.29;ReadPosRankSum=2.178;VQSLOD=5.6718;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.24:0,81,967	0/0:6,0:6:15.05:0,15,181	0/0:18,0:17:24.63:0,25,470	0/0:12,0:11:29.40:0,29,297	0/0:34,0:34:96.28:0,96,1150	1/1:1,16:17:45.07:434,45,0	1/1:1,13:14:30.05:290,30,0	0/0:35,0:35:52.25:0,52,883	0/0:16,0:16:48.15:0,48,579	1/1:0,19:19:57.09:550,57,0	1/1:4,16:20:47.94:441,48,0	0/0:15,0:15:42.10:0,42,484	1/1:3,16:19:42.07:405,42,0	0/0:12,0:12:36.07:0,36,399	0/0:25,0:25:72.20:0,72,849	1/1:0,21:21:57.09:550,57,0	0/0:33,0:33:87.26:0,87,1040	1/1:1,24:25:63.10:608,63,0	0/0:31,1:32:69.27:0,69,829	0/0:17,0:17:45.14:0,45,544	0/0:21,0:21:54.17:0,54,652	1/1:1,13:14:39.06:376,39,0	1/1:0,14:14:39.06:376,39,0	1/1:3,13:16:30.04:289,30,0	1/1:2,22:24:63.10:608,63,0	0/0:15,0:15:45.13:0,45,533	0/0:30,0:30:81.23:0,81,966	0/0:19,0:19:45.10:0,45,508
chr10	91052642	.	ATTAT	A	10525.87	PASS	AB=0.517;AC=21;AF=0.375;AN=56;BaseQRankSum=14.364;DP=555;FS=2.830;HRun=0;HaplotypeScore=95.5807;InbreedingCoeff=0.9235;MQ=84.74;MQ0=0;MQRankSum=-5.308;QD=51.85;ReadPosRankSum=2.851;VQSLOD=5.5195;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,3661	0/0:12,0:12:36.12:0,36,952	0/0:16,0:16:39.12:0,39,928	0/0:22,0:22:62.57:0,63,1516	1/1:1,18:19:48.16:919,48,0	0/0:22,0:22:66.23:0,66,1794	0/0:18,0:18:51.18:0,51,1392	1/1:1,23:24:69.22:1267,69,0	1/1:0,18:18:48.16:930,48,0	0/0:23,0:23:69.22:0,69,1737	0/0:14,0:14:42.14:0,42,1141	1/1:0,21:21:54.19:1046,54,0	0/0:22,0:22:60.21:0,60,1644	1/1:0,24:24:66.23:1279,66,0	0/0:22,0:22:66.21:0,66,1722	0/0:20,0:20:57.18:0,57,1504	0/0:26,0:26:75.22:0,75,1960	0/0:19,0:19:54.16:0,54,1415	1/1:0,14:14:42.14:807,42,0	1/1:0,17:17:51.17:980,51,0	1/1:2,23:25:56.01:1098,56,0	0/0:16,0:16:48.15:0,48,1227	0/0:14,0:14:42.14:0,42,1113	0/0:24,0:24:72.18:0,72,1818	0/0:17,0:17:51.18:0,51,1367	0/1:1,14:15:38.26:755,0,38	1/1:0,17:17:51.17:984,51,0	1/1:0,9:9:24.08:461,24,0
chr10	91054198	.	A	ATGGA	14237.62	PASS	AB=0.929;AC=54;AF=0.964;AN=56;BaseQRankSum=3.414;DP=432;FS=6.059;HRun=0;HaplotypeScore=252.4401;InbreedingCoeff=-0.0044;MQ=50.84;MQ0=0;MQRankSum=-3.612;QD=32.96;ReadPosRankSum=2.673;VQSLOD=3.9497;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:11:28.64:419,29,0	1/1:2,0:12:23.98:329,24,0	0/1:5,1:6:24.33:73,0,24	0/1:3,0:5:13.28:13,0,18	1/1:2,0:25:42.12:522,42,0	1/1:1,0:24:62.13:798,62,0	1/1:1,0:14:41.15:519,41,0	1/1:1,0:16:45.15:709,45,0	1/1:1,0:19:54.18:746,54,0	1/1:4,0:25:75.24:1186,75,0	1/1:2,0:18:20.75:264,21,0	1/1:1,0:24:66.21:904,66,0	1/1:0,0:24:59.93:766,60,0	1/1:0,0:5:9.03:118,9,0	1/1:1,0:22:51.06:645,51,0	1/1:0,0:17:51.12:666,51,0	1/1:0,0:13:38.98:498,39,0	1/1:1,0:5:12.04:183,12,0	1/1:1,0:10:29.10:395,29,0	1/1:1,0:27:50.53:722,51,0	1/1:3,0:10:21.07:306,21,0	1/1:1,0:19:39.13:516,39,0	1/1:0,0:16:30.09:403,30,0	1/1:2,0:8:12.04:163,12,0	1/1:0,0:7:21.07:313,21,0	1/1:1,0:23:67.43:1014,67,0	1/1:0,0:23:60.09:859,60,0	1/1:0,0:4:12.04:189,12,0
chr10	91056003	.	GGGACCCGCCCCTTAGTCCAGTTA	G	8115.81	PASS	AB=0.522;AC=21;AF=0.375;AN=56;BaseQRankSum=12.538;DP=547;FS=11.854;HRun=0;HaplotypeScore=274.1270;InbreedingCoeff=0.8642;MQ=78.55;MQ0=0;MQRankSum=-5.642;QD=38.46;ReadPosRankSum=0.402;VQSLOD=2.3619;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,7189	0/0:3,0:3:9.02:0,9,505	0/0:24,0:23:52.94:0,53,1934	0/0:18,0:18:42.11:0,42,1592	1/1:0,17:17:14.98:490,15,0	0/0:21,0:21:60.13:0,60,3480	0/0:21,0:21:60.09:0,60,2780	1/1:2,19:21:54.10:1053,54,0	1/1:1,22:23:18.06:1130,18,0	0/0:20,0:20:55.03:0,55,2929	0/0:15,0:15:42.05:0,42,2025	1/1:1,19:20:12.04:716,12,0	0/0:13,0:13:33.09:0,33,2134	1/1:1,19:20:9.03:565,9,0	0/0:19,0:19:51.17:0,51,3896	0/0:19,0:19:57.16:0,57,4248	0/0:31,0:31:78.21:0,78,5313	0/0:22,0:22:60.19:0,60,4796	1/1:5,8:13:33.02:515,33,0	1/1:1,16:17:20.95:711,21,0	1/1:4,23:27:6.02:194,6,0	0/0:21,0:21:57.19:0,57,3018	0/0:19,0:19:54.16:0,54,3040	0/0:19,0:19:54.17:0,54,4086	0/0:16,0:16:45.10:0,45,2711	0/1:2,22:24:99:1567,0,309	1/1:3,14:17:15.52:796,16,0	1/1:2,10:12:6.02:377,6,0
chr10	91057240	.	GA	G	3942.83	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=0.869;DP=507;FS=10.224;HRun=10;HaplotypeScore=74.3939;InbreedingCoeff=0.9525;MQ=70.97;MQ0=0;MQRankSum=-1.517;QD=21.78;ReadPosRankSum=2.200;VQSLOD=4.2830;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1422	0/0:5,0:5:12.03:0,12,133	0/0:5,0:5:6.01:0,6,62	0/0:11,1:11:5.63:0,6,201	0/0:5,0:19:35.86:0,36,208	1/1:2,10:12:29.94:253,30,0	1/1:0,25:25:62.99:547,63,0	0/0:6,0:19:48.98:0,49,304	0/0:2,0:23:45.61:0,46,239	1/1:7,18:25:47.96:416,48,0	1/1:2,9:11:26.99:234,27,0	0/0:2,0:11:19.92:0,20,100	1/1:1,12:13:38.98:335,39,0	0/0:2,0:15:28.56:0,29,151	0/0:21,0:20:51.14:0,51,564	1/1:4,18:22:56.96:491,57,0	0/0:36,2:38:47.14:0,47,965	1/1:1,13:14:35.99:312,36,0	0/0:5,0:12:26.13:0,26,159	0/0:4,0:11:23.29:0,23,147	0/0:5,0:43:96.95:0,97,521	1/1:1,9:10:29.99:260,30,0	1/1:1,14:15:44.99:390,45,0	1/1:1,24:25:62.95:547,63,0	1/1:3,6:9:17.98:156,18,0	0/0:8,0:20:24.70:0,25,147	0/0:5,0:21:51.29:0,51,265	0/0:2,0:5:8.52:0,9,43
chr10	91057312	.	AC	A	5926.11	PASS	AB=0.913;AC=23;AF=0.411;AN=56;BaseQRankSum=15.949;DP=624;FS=6.340;HRun=7;HaplotypeScore=125.0384;InbreedingCoeff=0.9349;MQ=71.68;MQ0=0;MQRankSum=-4.545;QD=24.39;ReadPosRankSum=0.646;VQSLOD=3.6040;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,156,1940	0/0:6,0:6:18.04:0,18,212	0/1:19,1:18:6.99:7,0,330	0/0:28,0:25:49.68:0,50,525	0/0:11,0:11:33.08:0,33,387	1/1:2,19:21:57.13:581,57,0	1/1:4,25:29:81.15:817,81,0	0/0:26,0:26:29.99:0,30,669	0/0:34,0:34:93.12:0,93,1168	1/1:2,15:17:48.09:489,48,0	1/1:0,10:10:27.06:275,27,0	0/0:24,0:24:69.22:0,69,868	1/1:0,20:20:60.14:612,60,0	0/0:22,0:22:60.17:0,60,730	0/0:19,0:19:48.15:0,48,604	1/1:4,23:27:69.14:701,69,0	0/0:45,0:45:99:0,126,1585	1/1:2,18:20:51.10:520,51,0	0/0:13,0:13:33.10:0,33,400	0/0:8,0:8:21.07:0,21,263	0/0:42,0:42:99:0,111,1368	1/1:2,15:17:42.08:428,42,0	1/1:2,12:14:33.07:335,33,0	1/1:2,33:35:87.18:886,87,0	1/1:1,11:12:27.06:275,27,0	0/0:19,1:20:26.59:0,27,648	0/0:17,0:17:51.15:0,51,625	0/0:6,0:6:18.06:0,18,227
chr10	91058657	.	AAGGTGAATCCCAG	A	11054.78	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=13.884;DP=473;FS=2.236;HRun=0;HaplotypeScore=184.6500;InbreedingCoeff=0.9504;MQ=81.15;MQ0=0;MQRankSum=-14.193;QD=68.24;ReadPosRankSum=2.361;VQSLOD=4.3587;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,6339	0/0:4,0:4:12.04:0,12,776	0/0:15,0:15:27.09:0,27,1310	0/0:14,0:15:20.63:0,21,1498	0/0:16,0:16:42.14:0,42,2437	1/1:1,13:14:33.11:1276,33,0	1/1:4,17:21:39.13:1416,39,0	0/0:27,0:27:66.23:0,66,3751	0/0:17,0:17:51.15:0,51,2881	1/1:5,15:20:42.14:1664,42,0	1/1:5,3:8:3.01:70,3,0	0/0:30,0:30:84.29:0,84,5330	1/1:3,11:14:30.10:1188,30,0	0/0:13,0:13:39.13:0,39,2440	0/0:19,0:19:54.19:0,54,3384	1/1:3,19:22:51.18:2021,51,0	0/0:24,0:24:72.25:0,72,4100	1/1:2,9:11:24.08:951,24,0	0/0:14,0:14:36.12:0,36,1964	0/0:13,0:13:36.12:0,36,2336	0/0:25,0:25:69.22:0,69,4271	1/1:1,10:11:18.02:557,18,0	1/1:2,7:9:8.99:178,9,0	1/1:4,16:20:21.07:783,21,0	1/1:3,9:12:24.08:951,24,0	0/0:18,0:18:48.16:0,48,3089	0/0:20,0:20:51.17:0,51,3204	0/0:3,0:3:9.03:0,9,591
chr10	91059003	.	C	CGTGT	19621.47	PASS	AB=0.687;AC=43;AF=0.768;AN=56;BaseQRankSum=-0.965;DP=948;FS=2.860;HRun=0;HaplotypeScore=162.9299;InbreedingCoeff=0.7373;MQ=66.23;MQ0=9;MQRankSum=0.931;QD=27.03;ReadPosRankSum=2.852;VQSLOD=4.5499;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:74,0:74:99:0,184,3135	0/0:13,0:13:36.12:0,36,609	0/0:63,0:23:36.02:0,36,517	0/1:56,0:24:3.11:3,0,316	1/1:3,22:30:65.32:1408,65,0	1/1:3,0:22:33.57:151,34,0	1/1:6,0:36:58.76:265,59,0	1/1:20,15:41:74.97:1462,75,0	1/1:6,29:35:72.25:1812,72,0	1/1:4,0:33:55.47:305,55,0	1/1:6,0:23:41.21:182,41,0	1/1:6,34:47:99:2465,108,0	1/1:2,0:30:50.36:227,50,0	1/1:6,20:29:54.19:1336,54,0	0/0:40,0:40:99:0,105,1780	1/1:4,0:37:32.60:314,33,0	0/0:32,0:32:81.22:0,81,1325	1/1:4,0:17:30.72:138,31,0	1/1:10,14:26:54.88:1196,55,0	1/1:4,24:30:63.22:1586,63,0	1/1:14,40:58:84.52:2052,85,0	0/1:5,0:37:28.77:229,0,29	1/1:5,0:19:29.64:130,30,0	0/1:3,0:19:17.71:105,0,18	1/1:8,0:20:27.77:125,28,0	1/1:6,28:37:97.36:2298,97,0	1/1:11,17:29:54.19:1321,54,0	1/1:3,11:14:21.07:511,21,0
chr10	91059237	.	G	GA	8593.40	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-14.834;DP=724;FS=0.611;HRun=7;HaplotypeScore=72.6103;InbreedingCoeff=0.9983;MQ=77.56;MQ0=1;MQRankSum=-1.932;QD=29.63;ReadPosRankSum=0.194;VQSLOD=5.2259;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,105,1004	0/0:14,0:14:41.97:0,42,377	0/0:28,0:26:44.80:0,45,401	0/0:17,0:15:17.91:0,18,160	1/1:3,20:23:60.14:708,60,0	0/0:24,0:24:66.10:0,66,637	0/0:26,0:26:72.10:0,72,690	1/1:7,27:34:55.28:943,55,0	1/1:1,17:18:45.14:544,45,0	0/0:23,0:23:63.09:0,63,603	0/0:23,0:23:44.43:0,44,414	1/1:4,22:26:57.17:689,57,0	0/0:24,0:24:60.07:0,60,573	1/1:2,18:20:22.19:550,22,0	0/0:33,0:33:96.12:0,96,914	0/0:30,0:30:78.09:0,78,741	0/0:29,0:29:75.09:0,75,713	0/0:30,0:30:81.07:0,81,764	1/1:2,25:27:75.20:882,75,0	1/1:1,23:25:46.27:838,46,0	1/1:4,35:38:93.26:1109,93,0	0/0:26,0:26:72.11:0,72,695	0/0:16,0:16:42.07:0,42,405	0/0:22,0:22:60.09:0,60,579	0/0:26,0:26:69.11:0,69,666	1/1:3,22:25:40.25:768,40,0	1/1:6,21:27:37.05:730,37,0	1/1:3,23:26:69.21:834,69,0
chr10	91060268	.	CA	C	4853.13	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.428;DP=584;FS=2.904;HRun=8;HaplotypeScore=84.1636;InbreedingCoeff=0.9858;MQ=72.29;MQ0=0;MQRankSum=-6.349;QD=25.28;ReadPosRankSum=-0.445;VQSLOD=5.2533;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.24:0,81,966	0/0:12,0:12:36.11:0,36,435	0/0:18,1:19:13.15:0,13,405	0/0:7,0:7:9.03:0,9,109	0/0:42,0:42:99:0,126,1495	1/1:3,17:20:51.03:483,51,0	1/1:1,13:14:39.06:376,39,0	0/0:30,0:30:78.21:0,78,909	0/0:24,0:24:66.19:0,66,782	1/1:1,18:19:54.07:516,54,0	1/1:3,25:28:72.09:684,72,0	0/0:20,0:20:51.15:0,51,606	1/1:0,7:7:21.03:203,21,0	0/0:25,0:25:69.21:0,69,834	0/0:31,0:31:87.27:0,87,1051	1/1:1,24:25:72.11:695,72,0	0/0:31,0:31:81.24:0,81,967	1/1:1,13:14:39.06:376,39,0	0/0:9,0:9:18.06:0,18,217	0/0:30,0:30:78.20:0,78,926	0/0:15,0:15:36.11:0,36,435	1/1:6,9:15:33.04:313,33,0	1/1:1,18:19:54.09:521,54,0	1/1:1,11:12:26.99:251,27,0	1/1:4,15:19:45.07:434,45,0	0/0:19,1:20:25.19:0,25,587	0/0:41,0:41:99:0,120,1429	0/0:8,0:8:24.06:0,24,277
chr10	91060305	.	AC	A	5650.18	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=17.521;DP=595;FS=0.000;HRun=1;HaplotypeScore=104.3515;InbreedingCoeff=0.9157;MQ=67.91;MQ0=3;MQRankSum=-10.392;QD=24.46;ReadPosRankSum=-2.178;VQSLOD=4.1303;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:85.68:0,86,1217	0/0:10,0:10:30.08:0,30,401	0/1:34,0:25:26.08:26,0,272	0/0:27,0:17:35.01:0,35,375	0/0:36,0:36:99:0,105,1405	1/1:3,17:20:51.05:597,51,0	1/1:4,13:17:48.09:580,48,0	0/0:22,0:22:66.12:0,66,819	0/0:24,0:24:72.20:0,72,949	1/1:6,12:18:45.08:511,45,0	1/1:7,30:37:92.02:966,92,0	0/0:16,0:16:48.14:0,48,651	1/1:2,4:6:14.96:171,15,0	0/0:22,0:22:66.21:0,66,897	0/0:22,0:22:63.20:0,63,879	1/1:6,16:22:57.93:664,58,0	0/0:33,0:33:99:0,99,1279	1/1:4,9:13:35.75:380,36,0	0/0:13,0:12:27.90:0,28,421	0/0:34,0:34:99:0,101,1312	0/0:13,0:13:36.06:0,36,448	1/1:1,14:15:45.01:525,45,0	1/1:7,10:17:36.98:439,37,0	1/1:4,8:12:33.35:323,33,0	1/1:5,15:20:43.31:469,43,0	0/0:20,0:20:32.51:0,33,691	0/0:35,0:35:99:0,105,1386	0/0:3,0:3:9.03:0,9,125
chr10	91060311	.	CAA	C	4065.38	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.546;DP=607;FS=0.331;HRun=5;HaplotypeScore=122.0673;InbreedingCoeff=0.9906;MQ=71.17;MQ0=3;MQRankSum=-9.973;QD=20.85;ReadPosRankSum=-0.995;VQSLOD=0.7831;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:82.42:0,82,1583	0/0:10,0:10:30.09:0,30,516	0/0:35,0:27:39.08:0,39,622	0/0:36,0:26:60.02:0,60,822	0/0:35,0:35:96.32:0,96,1691	1/1:20,0:20:43.30:328,43,0	1/1:17,1:18:53.72:462,54,0	0/0:24,0:24:72.22:0,72,1187	0/0:23,0:23:69.24:0,69,1247	1/1:15,0:15:44.81:377,45,0	1/1:34,2:36:64.91:630,65,0	0/0:18,0:18:54.17:0,54,939	1/1:8,0:8:20.65:149,21,0	0/0:21,0:21:60.18:0,60,1026	0/0:24,0:24:66.19:0,66,1090	1/1:22,2:24:66.83:558,67,0	0/0:34,0:34:96.19:0,96,1689	1/1:12,2:14:35.76:332,36,0	0/0:12,0:11:30.10:0,30,524	0/0:35,0:35:96.29:0,96,1622	0/0:14,0:14:42.13:0,42,710	1/1:14,1:15:44.45:339,44,0	1/1:14,2:16:34.62:367,35,0	1/1:11,0:11:26.79:223,27,0	1/1:17,1:18:37.93:302,38,0	0/0:21,0:21:29.80:0,30,913	0/0:32,0:32:87.30:0,87,1567	0/0:3,0:3:9.03:0,9,165
chr10	91060468	.	AAATC	A	9251.18	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=5.549;DP=653;FS=7.639;HRun=0;HaplotypeScore=150.0856;InbreedingCoeff=0.8496;MQ=58.63;MQ0=1;MQRankSum=-3.128;QD=18.14;ReadPosRankSum=0.597;VQSLOD=3.7837;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:42:72.25:0,72,1241	0/1:12,0:12:23.41:23,0,475	0/0:32,0:30:15.05:0,15,330	0/0:26,0:23:18.06:0,18,383	1/1:9,21:30:54.18:855,54,0	1/1:11,0:20:18.02:168,18,0	1/1:11,0:17:15.02:140,15,0	1/1:29,10:39:30.51:371,31,0	1/1:8,15:23:39.13:617,39,0	1/1:12,0:26:36.04:335,36,0	1/1:4,0:10:14.94:129,15,0	1/1:9,18:27:45.15:712,45,0	1/1:5,0:10:18.02:168,18,0	1/1:8,18:26:48.16:760,48,0	0/0:18,0:18:14.12:0,14,670	1/1:8,0:21:26.89:251,27,0	0/0:25,0:25:54.19:0,54,1287	1/1:8,0:17:14.96:130,15,0	1/1:13,11:24:33.11:520,33,0	1/1:8,15:23:45.15:703,45,0	1/1:15,19:33:45.15:712,45,0	1/1:6,0:14:8.85:65,9,0	1/1:2,0:13:30.03:280,30,0	1/1:15,0:27:20.73:164,21,0	1/1:7,0:18:21.02:196,21,0	1/1:6,16:21:45.13:688,45,0	1/1:17,24:41:59.99:949,60,0	1/1:6,9:16:21.06:313,21,0
chr10	91060978	.	CTGTGTGTG	C	7084.84	PASS	AB=0.710;AC=20;AF=0.357;AN=56;BaseQRankSum=0.489;DP=811;FS=7.257;HRun=0;HaplotypeScore=271.4446;InbreedingCoeff=0.8420;MQ=60.41;MQ0=7;MQRankSum=-10.263;QD=29.04;ReadPosRankSum=2.774;VQSLOD=3.5274;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:98.51:0,99,3251	0/0:11,0:14:14.33:0,14,654	0/0:24,0:15:5.87:0,6,63	0/0:24,0:17:6.02:0,6,68	0/0:7,0:21:36.75:0,37,1208	1/1:3,3:7:15.02:262,15,0	1/1:18,7:26:33.49:585,33,0	0/0:31,0:31:51.13:0,51,909	0/0:19,0:34:66.19:0,66,1869	1/1:20,20:42:90.31:2068,90,0	0/1:8,5:14:0.16:0,0,0	0/0:29,0:47:96.42:0,96,2555	1/1:11,11:24:42.13:950,42,0	0/0:9,0:35:53.79:0,54,1702	0/0:42,0:46:99:0,108,3677	1/1:7,22:32:56.91:1277,57,0	0/0:28,0:30:59.95:0,60,1529	0/1:11,7:18:13.74:620,0,14	0/0:26,0:35:45.12:0,45,1046	0/0:7,0:19:13.09:0,13,233	0/0:57,0:73:99:0,139,3283	1/1:7,12:19:17.92:408,18,0	1/1:8,2:10:8.01:70,8,0	1/1:17,3:21:11.80:174,12,0	1/1:10,20:30:21.98:670,22,0	0/0:31,0:35:72.11:0,72,1566	0/0:8,0:26:44.70:0,45,1185	0/0:9,0:12:27.04:0,27,465
chr10	91061070	.	A	ATG	10294.13	PASS	AB=0.619;AC=21;AF=0.375;AN=56;BaseQRankSum=18.843;DP=1116;FS=0.000;HRun=0;HaplotypeScore=310.3077;InbreedingCoeff=0.9132;MQ=49.29;MQ0=17;MQRankSum=-11.725;QD=30.10;ReadPosRankSum=-2.927;VQSLOD=3.4882;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,102,1312	0/0:13,0:13:39.11:0,39,502	0/0:92,0:34:39.39:0,39,726	0/0:106,0:35:78.23:0,78,975	0/0:33,0:33:77.91:0,78,1021	1/1:2,23:25:47.66:1134,48,0	0/1:10,16:26:14.82:468,0,15	0/0:58,0:57:99:0,144,1854	0/0:35,0:34:93.30:0,93,1231	1/1:15,30:46:99:1985,126,0	1/1:5,20:25:27.06:444,27,0	0/0:39,0:39:96.32:0,96,1278	1/1:3,35:38:99:1687,99,0	0/0:32,0:31:71.69:0,72,941	0/0:41,0:41:99:0,117,1554	1/1:8,35:43:99:1650,99,0	0/0:38,0:38:74.93:0,75,1236	1/1:4,13:17:7.77:640,8,0	0/0:26,0:25:54.18:0,54,718	0/0:29,0:28:66.16:0,66,818	0/0:109,0:109:99:0,250,3264	1/1:5,23:28:18:306,18,0	1/1:2,31:33:42.13:670,42,0	1/1:9,14:23:24.04:402,24,0	1/1:14,24:38:51.03:909,51,0	0/0:44,1:45:26.88:0,27,1373	0/0:13,0:13:39.13:0,39,519	0/0:22,0:22:28.66:0,29,615
chr10	91061106	.	GTA	G	7105.35	PASS	AB=0.554;AC=21;AF=0.375;AN=56;BaseQRankSum=18.115;DP=1139;FS=0.000;HRun=0;HaplotypeScore=350.2575;InbreedingCoeff=0.8821;MQ=47.12;MQ0=18;MQRankSum=-14.497;QD=21.34;ReadPosRankSum=0.374;VQSLOD=3.7167;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:84.24:0,84,1584	0/0:15,0:15:45.13:0,45,790	0/0:83,1:29:61.22:0,61,1000	0/0:89,1:28:56.04:0,56,891	0/0:42,0:42:99:0,111,1975	1/1:5,17:22:15:569,15,0	1/1:9,13:22:25.51:338,26,0	0/0:40,0:40:99:0,117,1935	0/0:42,0:41:99:0,117,2152	1/1:7,40:47:99:1905,138,0	1/1:4,18:22:23.79:344,24,0	0/0:47,0:47:99:0,126,2278	1/1:11,27:38:68.37:987,68,0	0/0:39,0:38:99:0,99,1797	0/0:52,0:52:99:0,147,2688	1/1:9,28:37:28.73:781,29,0	0/0:43,1:44:99:0,126,2028	1/1:7,6:13:19.70:197,20,0	0/0:24,0:17:48.13:0,48,817	0/0:24,0:23:63.20:0,63,1180	0/0:137,0:135:99:0,349,6188	1/1:5,36:41:51.03:748,51,0	1/1:5,29:34:1.40:606,1,0	1/1:14,12:26:11.81:118,12,0	0/1:6,25:31:54.99:512,0,55	0/0:56,1:57:98.79:0,99,2809	0/0:12,0:12:36.08:0,36,592	0/0:23,0:22:63.14:0,63,1065
chr10	91061128	.	A	ATG	17454.77	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-20.921;DP=1104;FS=5.938;HRun=0;HaplotypeScore=298.9318;InbreedingCoeff=0.9952;MQ=51.38;MQ0=22;MQRankSum=11.847;QD=35.19;ReadPosRankSum=6.309;VQSLOD=4.1584;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:75.32:0,75,1027	0/0:16,0:16:39.10:0,39,490	0/0:70,0:27:55.48:0,55,619	0/0:75,0:26:44.94:0,45,533	1/1:6,33:39:84.13:1429,84,0	0/0:3,0:17:35.74:0,36,155	0/0:3,0:26:28.88:0,29,120	1/1:9,46:56:99:2116,135,0	1/1:8,36:43:80.95:1342,81,0	0/0:4,0:46:99:0,105,557	0/0:5,0:23:14.20:0,14,103	1/1:3,42:46:96.33:1633,96,0	0/0:6,0:34:70.05:0,70,324	1/1:6,32:37:63.22:1072,63,0	0/0:45,0:44:99:0,123,1568	0/0:10,0:31:51.30:0,51,225	0/0:39,0:39:96.73:0,97,1226	0/0:6,0:20:33:0,33,165	1/1:5,16:19:45.09:712,45,0	1/1:3,23:25:63.22:1071,63,0	1/1:18,119:135:99:4693,277,0	0/0:10,0:43:56.48:0,56,247	0/0:7,0:34:48.08:0,48,205	0/0:3,0:27:16.22:0,16,79	0/0:5,0:24:40.20:0,40,173	1/1:8,42:53:99:2062,121,0	1/1:2,15:16:27.09:459,27,0	1/1:1,17:17:51.17:867,51,0
chr10	91062677	.	AG	A	6877.33	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=12.183;DP=608;FS=0.656;HRun=5;HaplotypeScore=59.1579;InbreedingCoeff=0.9968;MQ=78.59;MQ0=0;MQRankSum=-0.125;QD=30.70;ReadPosRankSum=4.264;VQSLOD=5.2995;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.30:0,96,1280	0/0:10,0:10:27.09:0,27,368	0/0:18,0:18:36.09:0,36,438	0/0:18,0:18:42.07:0,42,492	0/0:13,0:13:36.12:0,36,491	1/1:0,14:14:36.10:408,36,0	1/1:1,31:32:90.26:1021,90,0	0/0:20,0:20:57.16:0,57,735	0/0:23,0:23:69.21:0,69,920	1/1:0,11:11:33.08:365,33,0	1/1:1,6:7:21.04:227,21,0	0/0:24,0:24:72.24:0,72,985	1/1:1,25:26:69.20:782,69,0	0/0:19,0:19:51.16:0,51,682	0/0:36,0:36:99:0,105,1406	1/1:1,22:23:16.13:571,16,0	0/0:35,1:36:65.24:0,65,1241	1/1:2,27:29:81.23:919,81,0	0/0:24,0:24:60.13:0,60,754	0/0:12,0:12:36.12:0,36,492	0/0:45,0:45:99:0,129,1701	1/1:0,16:16:48.14:543,48,0	1/1:0,13:13:33.09:374,33,0	1/1:1,39:40:99:1258,111,0	1/1:1,12:13:36.10:408,36,0	0/0:20,1:21:26.15:0,26,730	0/0:23,0:23:66.19:0,66,864	0/0:8,0:8:24.06:0,24,311
chr10	91063123	.	TC	T	8054.89	PASS	AB=0.919;AC=23;AF=0.411;AN=56;BaseQRankSum=11.526;DP=591;FS=3.666;HRun=1;HaplotypeScore=59.8120;InbreedingCoeff=0.9439;MQ=87.27;MQ0=0;MQRankSum=-2.117;QD=33.70;ReadPosRankSum=0.779;VQSLOD=4.5240;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1679	0/0:8,0:8:24.08:0,24,384	0/0:22,0:22:60.19:0,60,917	0/0:23,0:23:68.75:0,69,992	0/0:20,0:20:60.20:0,60,959	1/1:0,16:16:39.13:546,39,0	1/1:0,24:24:60.20:839,60,0	0/0:26,0:26:75.23:0,75,1124	0/0:19,0:19:57.18:0,57,888	1/1:0,13:13:39.13:543,39,0	1/1:0,22:22:66.18:901,66,0	0/0:16,0:16:48.16:0,48,767	1/1:0,12:12:36.12:504,36,0	0/0:12,0:12:36.12:0,36,575	0/0:13,0:13:39.13:0,39,621	1/1:0,17:17:51.17:713,51,0	0/0:57,0:57:99:0,172,2724	1/1:0,24:24:69.23:963,69,0	0/0:21,0:21:63.21:0,63,1005	0/0:23,0:23:69.24:0,69,1103	0/0:29,0:29:87.28:0,87,1357	1/1:0,19:19:54.14:733,54,0	1/1:0,18:18:54.18:755,54,0	1/1:0,28:28:78.26:1091,78,0	1/1:0,12:12:33.11:462,33,0	0/1:31,3:34:4.49:4,0,1384	0/0:22,0:21:63.21:0,63,1007	0/0:6,0:6:18.06:0,18,288
chr10	91065285	.	AACAG	A	11148.87	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.793;DP=779;FS=11.969;HRun=0;HaplotypeScore=134.2245;InbreedingCoeff=0.9976;MQ=79.05;MQ0=0;MQRankSum=-2.161;QD=41.14;ReadPosRankSum=3.842;VQSLOD=5.0789;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,148,3823	0/0:13,0:13:36.12:0,36,972	0/0:25,0:25:46.97:0,47,1529	0/0:21,0:21:49.80:0,50,1096	0/0:15,0:15:39.13:0,39,1015	1/1:1,20:21:54.19:1025,54,0	1/1:5,34:39:90.30:1678,90,0	0/0:33,0:33:87.30:0,87,2209	0/0:40,0:39:99:0,105,2762	1/1:0,16:16:45.15:824,45,0	1/1:2,17:18:36.05:593,36,0	0/0:42,0:41:99:0,108,2902	1/1:1,27:28:66.23:1236,66,0	0/0:42,0:41:99:0,114,2855	0/0:41,0:41:99:0,111,2968	1/1:0,29:29:66.23:1252,66,0	0/0:28,0:28:78.27:0,78,2048	1/1:1,30:31:66.23:1253,66,0	0/0:22,0:22:66.23:0,66,1701	0/0:29,0:26:75.26:0,75,1961	0/0:38,0:37:93.32:0,93,2456	1/1:3,23:23:50.92:761,51,0	1/1:0,10:10:15:248,15,0	1/1:1,29:30:72.25:1367,72,0	1/1:0,22:22:48.16:911,48,0	0/0:32,0:29:87.30:0,87,2322	0/0:25,0:24:69.24:0,69,1853	0/0:11,0:10:30.10:0,30,799
chr10	91065405	.	TAC	T	210.09	PASS	AB=0.949;AC=16;AF=0.500;AN=32;BaseQRankSum=1.820;DP=698;FS=18.757;HRun=0;HaplotypeScore=150.0403;InbreedingCoeff=0.1387;MQ=57.09;MQ0=21;MQRankSum=0.262;QD=0.77;ReadPosRankSum=0.164;VQSLOD=1.0662;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:30:17.86:0,18,306	0/1:8,1:10:13.05:38,0,13	./.	./.	./.	./.	0/1:44,0:40:0:0,0,0	0/0:36,0:25:2.97:0,3,20	1/1:33,0:32:6.44:28,6,0	0/1:24,0:21:1.18:1,0,20	./.	0/0:30,0:28:2.41:0,2,17	0/0:18,0:16:2.12:0,2,4	0/0:31,0:29:0:0,0,0	0/1:16,2:18:9.99:60,0,10	1/1:20,0:16:2.12:12,2,0	1/1:21,1:22:6.38:118,6,0	1/1:14,0:14:3.82:17,4,0	1/1:15,0:14:0.97:8,1,0	./.	./.	./.	./.	0/1:37,0:35:0:0,0,0	./.	0/1:34,0:30:28.08:30,0,28	./.	./.
chr10	91065453	.	CAT	C	1089.26	PASS	AB=0.985;AC=30;AF=0.600;AN=50;BaseQRankSum=5.730;DP=504;FS=9.311;HRun=0;HaplotypeScore=80.4001;InbreedingCoeff=0.0111;MQ=32.84;MQ0=56;MQRankSum=-4.184;QD=2.49;ReadPosRankSum=-2.294;VQSLOD=0.5037;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:40:1.70:2,0,451	0/1:8,0:7:9.09:21,0,9	0/0:7,0:2:2.90:0,3,16	0/0:14,0:4:11.64:0,12,80	./.	0/0:8,0:8:0.47:0,0,1	0/1:13,0:9:0:0,0,0	0/1:22,0:13:35.30:112,0,35	1/1:21,5:22:16.57:176,17,0	0/1:27,0:18:10.29:128,0,10	0/1:9,0:8:0:0,0,0	1/1:15,8:19:17.93:103,18,0	0/1:17,0:13:17.67:60,0,18	1/1:18,6:20:11.01:61,11,0	0/1:31,0:29:35.76:36,0,174	1/1:11,2:9:5.77:46,6,0	0/1:34,0:31:99:156,0,180	0/1:12,1:11:33.01:33,0,58	1/1:7,1:3:8.97:74,9,0	0/1:11,2:10:0:0,0,0	1/1:50,0:31:2.96:19,3,0	./.	./.	0/1:25,0:22:0:0,0,0	0/1:9,0:7:0:0,0,0	1/1:14,2:11:20.59:150,21,0	1/1:7,1:4:2.94:18,3,0	0/1:4,0:3:14.22:24,0,14
chr10	91065454	.	ATACACACG	A	1218.82	PASS	AB=0.969;AC=27;AF=0.587;AN=46;BaseQRankSum=5.293;DP=497;FS=16.170;HRun=0;HaplotypeScore=97.2537;InbreedingCoeff=0.1148;MQ=33.03;MQ0=56;MQRankSum=-5.112;QD=3.73;ReadPosRankSum=-2.834;VQSLOD=0.3132;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:41:20.08:0,20,1210	0/1:8,0:7:10.59:11,0,158	0/0:7,0:2:5.34:0,5,22	0/0:13,0:5:10.84:0,11,132	./.	1/1:8,0:8:0.89:2,1,0	0/1:14,0:10:0.01:0,0,0	0/1:20,0:12:66.24:66,0,102	1/1:26,0:22:5.61:197,6,0	0/1:13,14:18:67.51:192,0,68	./.	1/1:21,0:17:19.07:120,19,0	0/1:17,0:13:17.99:128,0,18	1/1:23,0:19:10.03:59,10,0	0/0:32,0:30:7.26:0,7,767	1/1:12,0:8:6.02:93,6,0	0/1:34,0:31:99:154,0,387	0/1:13,0:11:41.74:79,0,42	1/1:8,0:3:6.75:69,7,0	0/1:13,0:10:0:0,0,0	1/1:46,0:28:0.47:1,0,0	./.	./.	./.	0/1:9,0:7:0:0,0,0	1/1:15,0:10:16.85:156,17,0	0/1:8,0:4:0:0,0,0	0/1:4,0:3:26.19:26,0,36
chr10	91065458	.	ACACG	A	356.75	PASS	AB=0.962;AC=14;AF=0.304;AN=46;BaseQRankSum=4.960;DP=497;FS=22.421;HRun=0;HaplotypeScore=86.6863;InbreedingCoeff=-0.0881;MQ=32.39;MQ0=57;MQRankSum=-1.625;QD=1.81;ReadPosRankSum=-0.586;VQSLOD=-0.5461;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:40:62.50:0,62,1320	0/0:8,0:7:15.02:0,15,212	0/0:11,0:2:6.01:0,6,66	0/0:20,0:5:12.03:0,12,227	./.	0/1:5,1:6:0:0,0,0	0/1:15,1:10:0:0,0,0	0/0:28,0:17:38.22:0,38,417	0/1:24,0:20:30.46:46,0,30	0/1:29,0:21:81.79:82,0,134	0/0:9,0:8:0:0,0,0	0/1:18,1:15:6.25:17,0,6	0/1:16,0:13:50.29:87,0,50	0/0:21,1:18:0.43:0,0,2	0/0:30,0:28:44.93:0,45,897	1/1:11,1:8:6:74,6,0	0/1:30,0:27:24.98:25,0,622	0/1:11,0:9:46.37:46,0,91	0/1:8,0:3:16.11:16,0,21	0/1:11,0:9:0:0,0,0	0/0:48,0:28:2.94:0,3,18	./.	./.	./.	./.	0/1:11,0:7:24.95:43,0,25	0/0:8,0:4:2.77:0,3,17	0/1:3,1:3:44.39:44,0,63
chr10	91065459	.	CACGCA	C	143.93	PASS	AB=0.882;AC=9;AF=0.205;AN=44;BaseQRankSum=5.389;DP=498;FS=4.998;HRun=0;HaplotypeScore=89.9664;InbreedingCoeff=0.2174;MQ=32.30;MQ0=55;MQRankSum=-3.387;QD=1.43;ReadPosRankSum=-0.555;VQSLOD=1.4121;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:40:83.78:0,84,2258	0/0:8,0:7:14.92:0,15,374	0/0:12,0:2:6.02:0,6,108	0/0:20,0:5:15.01:0,15,324	./.	0/1:6,0:6:0.05:0,0,0	0/0:16,0:10:0:0,0,0	0/0:30,0:19:49.55:0,50,841	0/1:19,5:20:70.10:83,0,70	0/0:29,0:21:38.68:0,39,493	./.	1/1:12,7:16:0.09:20,0,0	0/0:16,0:13:17.33:0,17,200	1/1:16,6:18:2.85:26,3,0	0/0:29,0:27:45.62:0,46,1304	0/0:13,0:9:0.98:0,1,4	0/0:30,0:27:54.78:0,55,1217	0/0:10,0:8:19.78:0,20,272	0/1:7,1:3:47.22:47,0,66	0/1:9,2:9:0:0,0,0	0/0:50,0:29:3.01:0,3,50	./.	./.	./.	./.	0/1:9,2:7:74.25:74,0,161	0/0:7,1:4:3.01:0,3,52	0/0:4,0:3:2.94:0,3,109
chr10	91065460	.	ACG	A	327.14	PASS	AB=0.992;AC=16;AF=0.364;AN=44;BaseQRankSum=5.627;DP=494;FS=39.147;HRun=0;HaplotypeScore=79.1178;InbreedingCoeff=-0.1002;MQ=32.26;MQ0=54;MQRankSum=-2.263;QD=1.44;ReadPosRankSum=-1.441;VQSLOD=-0.1582;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:38:4.89:0,5,1046	0/0:8,0:7:14.97:0,15,161	0/0:12,0:2:6.01:0,6,65	0/0:20,0:5:12.03:0,12,190	./.	0/1:6,0:6:0:0,0,0	0/1:16,0:10:0.04:0,0,0	0/1:30,0:19:8.95:9,0,327	0/1:24,0:20:19.91:20,0,33	0/1:29,0:21:94.36:101,0,94	./.	1/1:17,1:16:3.62:14,4,0	0/1:16,0:13:49.09:69,0,49	0/0:22,0:18:0.47:0,0,2	0/0:29,0:27:30.34:0,30,705	1/1:11,2:9:5.98:50,6,0	0/1:30,0:27:68.18:68,0,514	0/1:9,1:8:21.32:21,0,130	0/1:8,0:3:3.49:3,0,21	0/1:11,0:9:0:0,0,0	0/0:50,0:29:2.93:0,3,18	./.	./.	./.	./.	0/1:12,0:8:16.22:83,0,16	0/0:8,0:4:2.94:0,3,18	0/1:4,0:3:9.24:9,0,58
chr10	91065508	.	A	ACAC	522.47	PASS	AB=0.903;AC=11;AF=0.275;AN=40;BaseQRankSum=2.235;DP=551;FS=19.354;HRun=0;HaplotypeScore=66.9747;InbreedingCoeff=0.0323;MQ=29.87;MQ0=45;MQRankSum=-4.439;QD=2.74;ReadPosRankSum=-0.616;VQSLOD=0.0698;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:30:66.20:0,66,1003	0/0:6,0:5:9.02:0,9,125	0/0:32,0:5:12.04:0,12,187	0/0:47,0:9:27.09:0,27,425	./.	0/1:4,0:4:0:0,0,0	0/0:16,2:11:0.47:0,0,1	0/1:42,6:26:76.56:77,0,584	0/1:18,0:13:7.56:11,0,8	0/0:7,0:4:12.04:0,12,188	./.	1/1:11,1:11:1.55:4,2,0	0/1:7,1:7:12.73:13,0,121	0/1:23,2:17:50.81:59,0,51	0/0:31,0:31:66.22:0,66,1051	0/1:14,0:9:0.01:0,0,0	0/0:32,0:31:69.23:0,69,1148	0/0:7,0:5:12:0,12,138	0/1:24,5:15:99:315,0,152	./.	0/0:88,3:63:2.67:0,3,50	0/1:10,0:9:0:0,0,0	./.	./.	./.	0/1:11,4:15:99:151,0,247	./.	./.
chr10	91065536	.	ACACG	A	102.68	PASS	AB=0.948;AC=10;AF=0.250;AN=40;BaseQRankSum=3.240;DP=419;FS=13.939;HRun=0;HaplotypeScore=55.6316;InbreedingCoeff=0.2367;MQ=31.98;MQ0=38;MQRankSum=-2.539;QD=0.69;ReadPosRankSum=-1.217;VQSLOD=-0.5132;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:55.69:0,56,1280	0/0:6,0:6:12.75:0,13,273	0/0:31,0:3:9.03:0,9,188	0/0:48,0:5:12.04:0,12,256	./.	0/0:2,0:2:0:0,0,0	0/1:14,0:10:0:0,0,0	0/1:17,1:11:42.95:43,0,157	0/0:8,1:7:0:0,0,0	0/1:3,0:3:24.03:24,0,49	./.	0/0:8,1:7:2.98:0,3,22	0/0:8,1:8:10.85:0,11,158	1/1:18,3:16:0.93:33,1,0	0/0:29,0:29:63.06:0,63,1337	./.	0/0:38,0:35:89.36:0,89,1969	0/0:3,0:2:3.01:0,3,57	0/1:12,1:6:52.22:78,0,52	./.	0/1:67,1:51:0.17:1,0,0	0/1:7,1:7:0:0,0,0	./.	./.	./.	0/0:10,0:9:12.69:0,13,114	./.	1/1:2,0:1:3:28,3,0
chr10	91065538	.	ACG	A	84.78	PASS	AB=0.927;AC=13;AF=0.342;AN=38;BaseQRankSum=4.263;DP=410;FS=11.062;HRun=0;HaplotypeScore=49.2742;InbreedingCoeff=0.2426;MQ=32.03;MQ0=40;MQRankSum=-3.463;QD=0.55;ReadPosRankSum=-0.337;VQSLOD=0.1919;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:58.10:0,58,937	0/1:6,0:6:5.32:5,0,169	0/0:35,0:3:9.03:0,9,150	0/0:47,1:5:14.41:0,14,234	./.	./.	0/1:12,0:7:0:0,0,0	0/1:16,0:9:4.46:4,0,153	0/0:9,0:7:0:0,0,0	0/1:2,1:3:24.40:37,0,24	./.	1/1:6,2:6:0.88:2,1,0	0/0:9,0:8:14.75:0,15,124	1/1:17,2:15:4.16:39,4,0	0/0:29,0:29:65.78:0,66,1051	0/1:9,1:5:0:0,0,0	0/0:38,0:35:89.04:0,89,1457	0/0:2,1:2:3.01:0,3,43	0/1:12,2:6:33.86:87,0,34	./.	0/1:61,3:46:0.10:1,0,0	./.	./.	./.	./.	0/0:10,0:9:12.69:0,13,105	./.	1/1:2,0:1:2.84:14,3,0
chr10	91065554	.	ACG	A	94.75	PASS	AB=0.938;AC=10;AF=0.294;AN=34;BaseQRankSum=4.862;DP=345;FS=19.556;HRun=0;HaplotypeScore=40.2988;InbreedingCoeff=0.1686;MQ=33.01;MQ0=41;MQRankSum=-3.168;QD=0.86;ReadPosRankSum=-1.656;VQSLOD=-0.1505;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:68.87:0,69,1133	0/1:5,0:5:23.89:24,0,148	0/0:25,0:2:5.60:0,6,37	0/0:50,0:3:8.86:0,9,108	./.	./.	0/1:9,0:4:0:0,0,0	0/0:11,0:4:9.02:0,9,106	0/0:6,0:5:0:0,0,0	0/1:3,1:4:44.63:59,0,45	./.	./.	0/1:8,0:7:7.72:8,0,97	1/1:12,1:11:5.05:42,5,0	0/0:23,0:23:38.98:0,39,683	0/1:8,1:3:0:0,0,0	0/0:40,0:37:99:0,102,1645	0/0:2,0:1:0.47:0,0,1	0/1:12,1:4:10.58:55,0,11	./.	1/1:47,2:31:2.58:11,3,0	./.	./.	./.	./.	./.	./.	0/0:2,0:1:2.98:0,3,22
chr10	91065646	.	GCACACA	G	40.43	PASS	AB=0.858;AC=8;AF=0.190;AN=42;BaseQRankSum=2.652;DP=457;FS=6.112;HRun=0;HaplotypeScore=65.9344;InbreedingCoeff=0.2583;MQ=32.25;MQ0=76;MQRankSum=-3.289;QD=0.81;ReadPosRankSum=-0.496;VQSLOD=0.7022;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:76.40:0,76,1839	0/0:8,0:7:18.06:0,18,449	./.	0/0:45,0:4:9.03:0,9,202	0/0:8,2:9:0:0,0,0	1/1:3,1:3:0.89:2,1,0	0/1:9,3:9:0:0,0,0	0/0:24,0:7:15.05:0,15,282	0/0:12,2:8:8.76:0,9,161	0/1:8,0:3:3.97:41,0,4	./.	0/1:13,0:12:3.24:3,0,201	0/1:4,3:5:54.89:60,0,55	0/0:9,2:10:5.54:0,6,93	0/0:31,0:30:45.13:0,45,1414	./.	0/0:36,0:36:96.01:0,96,2526	1/1:4,1:4:3.01:32,3,0	0/0:12,0:3:3.01:0,3,105	0/0:5,1:6:3.01:0,3,69	0/0:77,3:55:9:0,9,269	./.	./.	./.	./.	0/0:11,0:6:10.28:0,10,311	0/0:2,0:2:3.01:0,3,48	0/0:6,0:5:14.94:0,15,265
chr10	91065668	.	GCA	G	264.34	PASS	AB=0.900;AC=16;AF=0.364;AN=44;BaseQRankSum=3.614;DP=497;FS=1.052;HRun=0;HaplotypeScore=59.6183;InbreedingCoeff=0.0620;MQ=34.02;MQ0=69;MQRankSum=-2.290;QD=1.15;ReadPosRankSum=1.692;VQSLOD=0.9130;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:54.12:0,54,816	0/0:5,0:5:12.04:0,12,201	0/0:34,0:3:6.49:0,6,87	0/0:41,0:4:12.04:0,12,175	0/1:14,1:14:14.91:32,0,15	0/0:6,0:4:3.47:0,3,30	0/0:14,0:13:5.99:0,6,73	0/0:18,0:5:5.88:0,6,36	0/1:14,3:11:27.19:30,0,27	0/1:11,1:5:12.06:24,0,12	./.	1/1:8,7:14:6.49:77,6,0	0/0:6,0:5:5.94:0,6,41	1/1:11,3:13:2.97:38,3,0	0/0:31,1:31:63.12:0,63,909	./.	0/0:35,0:34:68.43:0,68,1212	1/1:6,1:5:3.01:38,3,0	0/1:13,1:5:29.14:29,0,36	1/1:8,2:9:3.01:38,3,0	0/1:69,32:77:20.63:21,0,96	./.	./.	./.	./.	0/1:10,1:7:29.03:29,0,34	0/1:3,0:3:0:0,0,0	0/1:6,1:6:13.54:45,0,14
chr10	91065669	.	C	CAT	499.63	PASS	AB=0.858;AC=10;AF=0.217;AN=46;BaseQRankSum=1.591;DP=515;FS=7.838;HRun=0;HaplotypeScore=63.5848;InbreedingCoeff=0.0933;MQ=33.86;MQ0=71;MQRankSum=-1.747;QD=2.66;ReadPosRankSum=0.212;VQSLOD=0.6098;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:67.32:0,67,853	0/0:5,0:5:12.04:0,12,183	0/0:33,0:3:8.95:0,9,91	0/0:41,0:4:12.04:0,12,180	0/1:14,3:15:13.99:52,0,14	1/1:6,0:4:2.11:6,2,0	0/0:14,0:13:6.01:0,6,70	0/0:20,0:5:8.63:0,9,55	0/1:15,3:12:29.22:38,0,29	0/0:12,0:5:11.89:0,12,90	./.	0/0:15,3:16:5.93:0,6,41	0/0:6,0:5:11.84:0,12,97	0/0:11,4:14:8.72:0,9,50	0/0:33,0:32:65.91:0,66,873	./.	0/0:35,0:34:89.65:0,90,1225	0/0:7,0:5:2.97:0,3,20	0/1:15,2:6:10.91:102,0,11	0/0:9,3:11:2.97:0,3,20	0/1:92,16:78:1.64:268,0,2	./.	./.	./.	0/0:9,0:7:0:0,0,0	0/1:9,3:8:50.15:92,0,50	1/1:3,0:3:2.96:19,3,0	0/1:6,1:6:39.23:46,0,39
chr10	91065682	.	GCATACA	G	90.03	PASS	AB=0.993;AC=8;AF=0.167;AN=48;BaseQRankSum=2.261;DP=542;FS=5.117;HRun=0;HaplotypeScore=77.6953;InbreedingCoeff=0.0304;MQ=33.80;MQ0=60;MQRankSum=-3.549;QD=0.87;ReadPosRankSum=-1.642;VQSLOD=1.1831;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:64.55:0,65,1775	0/0:7,0:6:13.84:0,14,294	0/1:30,0:4:18.97:19,0,129	0/0:37,0:10:29.95:0,30,556	0/0:17,1:15:6.02:0,6,124	0/0:7,0:5:1.77:0,2,5	0/0:18,1:17:14.71:0,15,323	0/1:21,1:6:39.41:39,0,46	0/0:17,1:13:12.04:0,12,249	0/1:14,0:9:22.36:22,0,238	./.	0/0:18,0:16:5.89:0,6,147	1/1:3,1:4:6.25:68,6,0	0/0:15,2:17:4.26:0,4,69	0/0:29,0:28:48.79:0,49,1482	./.	0/0:33,0:32:81.21:0,81,2098	0/0:5,0:4:2.99:0,3,24	0/0:22,0:4:12.01:0,12,221	0/0:17,0:15:3.01:0,3,74	0/0:106,8:79:23.36:0,23,557	./.	0/0:8,0:6:3:0,3,29	./.	0/1:10,0:8:0:0,0,0	0/1:18,0:12:37.67:38,0,304	0/0:4,0:4:2.64:0,3,19	0/1:5,0:4:22.06:22,0,175
chr10	91065683	.	CAT	C	33.57	PASS	AB=0.913;AC=7;AF=0.146;AN=48;BaseQRankSum=3.449;DP=544;FS=4.544;HRun=0;HaplotypeScore=65.1378;InbreedingCoeff=0.1422;MQ=33.91;MQ0=59;MQRankSum=-2.590;QD=0.46;ReadPosRankSum=-1.917;VQSLOD=0.5226;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:39.20:0,39,1065	0/0:9,0:8:16.84:0,17,216	0/0:29,0:4:6.53:0,7,82	0/0:38,0:11:28.60:0,29,467	0/0:18,0:15:6.02:0,6,86	0/0:6,1:5:2.77:0,3,13	0/0:19,0:17:14.68:0,15,267	0/1:22,0:6:18.53:19,0,45	0/0:19,0:13:11.91:0,12,171	0/1:10,4:9:64.36:64,0,154	./.	0/0:18,0:15:5.60:0,6,63	1/1:3,1:4:5.93:41,6,0	0/0:17,0:16:3.99:0,4,15	0/0:30,0:28:48.62:0,49,898	./.	0/0:33,0:32:81.15:0,81,1319	0/0:4,1:4:2.94:0,3,18	0/0:22,0:4:11.97:0,12,181	0/0:17,0:15:3:0,3,29	0/0:116,0:79:22.54:0,23,410	./.	0/0:8,0:6:2.94:0,3,20	./.	0/1:8,3:8:0:0,0,0	0/1:18,0:12:14.49:14,0,184	0/1:4,0:4:0:0,0,0	0/0:5,0:4:0.86:0,1,62
chr10	91065748	.	GCA	G	77.34	PASS	AB=0.915;AC=12;AF=0.250;AN=48;BaseQRankSum=3.114;DP=484;FS=1.226;HRun=0;HaplotypeScore=43.7801;InbreedingCoeff=0.2214;MQ=27.96;MQ0=52;MQRankSum=-2.327;QD=0.68;ReadPosRankSum=-0.993;VQSLOD=1.3213;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,1:27:24.06:0,24,393	0/0:6,1:6:9.03:0,9,148	0/0:42,0:1:2.94:0,3,18	0/0:63,0:6:9.03:0,9,120	./.	1/1:3,0:2:1.82:5,2,0	0/1:15,3:12:0:0,0,0	1/1:8,0:1:0.89:2,1,0	0/0:10,0:6:0.87:0,1,2	0/1:21,2:18:75.95:76,0,120	0/0:14,1:12:3.01:0,3,37	0/0:11,0:5:2.98:0,3,21	0/1:7,0:6:0.01:19,0,0	0/0:14,0:8:2.43:0,2,19	0/0:19,0:17:17.99:0,18,268	0/0:4,2:3:3.01:0,3,33	0/1:20,2:22:37.95:38,0,633	0/0:3,1:3:2.98:0,3,21	1/1:8,0:2:2.84:14,3,0	./.	0/0:50,0:33:0.44:0,0,1	0/0:9,1:8:2.99:0,3,23	./.	./.	1/1:18,4:20:2.96:33,3,0	0/0:20,0:12:5.72:0,6,65	0/0:7,0:4:8.92:0,9,62	0/0:5,0:4:1.82:0,2,14
chr10	91065763	.	CGCAT	C	410.10	PASS	AB=0.977;AC=25;AF=0.463;AN=54;BaseQRankSum=3.107;DP=499;FS=3.405;HRun=0;HaplotypeScore=70.3819;InbreedingCoeff=0.2745;MQ=33.72;MQ0=49;MQRankSum=-3.790;QD=1.63;ReadPosRankSum=-4.254;VQSLOD=0.4535;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:9.03:0,9,660	0/0:4,0:4:9.03:0,9,259	0/0:39,0:2:5.04:0,5,34	0/0:52,0:6:13.81:0,14,210	1/1:5,2:5:2.99:26,3,0	1/1:6,0:5:3.31:21,3,0	0/0:23,0:15:0.33:0,0,1	0/0:7,0:6:0.10:0,0,16	1/1:6,0:6:1.80:5,2,0	0/1:31,1:21:36.53:37,0,233	0/0:8,0:8:3.01:0,3,78	0/1:10,0:7:12.01:12,0,15	1/1:12,0:11:6.84:47,7,0	0/1:14,0:9:3.56:4,0,16	0/0:14,1:13:11.11:0,11,605	0/0:9,0:5:2.65:0,3,53	0/0:26,0:25:46.90:0,47,1282	0/0:5,0:3:0.89:0,1,2	0/1:10,1:6:21.73:53,0,22	1/1:9,4:9:4.52:24,5,0	1/1:64,0:48:7.74:86,8,0	1/1:13,0:9:1.25:3,1,0	0/0:14,0:13:2.98:0,3,22	./.	1/1:27,0:25:7.61:37,8,0	1/1:20,1:14:7.99:159,8,0	0/1:8,0:7:25.43:25,0,65	1/1:3,1:4:5.19:27,5,0
chr10	91065808	.	TAC	T	66.89	PASS	AB=0.920;AC=9;AF=0.196;AN=46;BaseQRankSum=1.215;DP=646;FS=0.000;HRun=0;HaplotypeScore=88.5306;InbreedingCoeff=-0.0215;MQ=33.22;MQ0=44;MQRankSum=-0.985;QD=0.38;ReadPosRankSum=-0.152;VQSLOD=0.9392;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:24:42.14:0,42,698	0/0:7,0:7:15.94:0,16,250	0/0:44,0:6:6.02:0,6,95	0/0:45,0:7:14.97:0,15,165	./.	0/0:8,1:7:0.94:0,1,2	0/1:29,5:24:28.73:29,0,91	0/1:30,0:13:3.94:4,0,91	0/0:15,0:12:3.01:0,3,50	0/1:27,2:22:46.67:47,0,249	./.	0/0:15,0:9:2.85:0,3,50	0/0:10,1:10:0.47:0,0,1	0/0:24,0:21:6.01:0,6,100	0/0:23,0:20:42.12:0,42,649	./.	0/0:26,1:27:60.14:0,60,935	0/1:7,2:6:31.49:31,0,44	0/1:32,1:19:2.21:2,0,365	0/1:13,0:12:9.74:10,0,184	0/0:117,5:97:72.21:0,72,1190	1/1:7,1:7:3.01:38,3,0	./.	./.	0/1:18,3:21:22.84:23,0,131	0/0:38,1:32:15.74:0,16,610	0/0:7,0:5:12.04:0,12,199	0/0:8,0:6:8.99:0,9,112
chr10	91065847	.	ACG	A	721.17	PASS	AB=0.938;AC=22;AF=0.524;AN=42;BaseQRankSum=4.502;DP=392;FS=20.864;HRun=0;HaplotypeScore=49.2410;InbreedingCoeff=0.5282;MQ=39.06;MQ0=30;MQRankSum=-2.570;QD=4.29;ReadPosRankSum=-0.376;VQSLOD=0.2752;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:41.57:0,42,626	0/0:10,0:10:6.98:0,7,180	0/0:37,0:8:4.36:0,4,207	0/0:44,0:8:17.37:0,17,180	./.	./.	0/0:16,2:12:2.54:0,3,13	0/1:6,0:3:11.62:22,0,12	1/1:4,0:3:2.97:20,3,0	1/1:14,1:12:21.68:152,22,0	./.	0/0:5,2:5:2.82:0,3,26	0/1:4,0:3:0:0,0,0	1/1:11,2:10:2.75:21,3,0	0/0:26,0:24:35.14:0,35,557	./.	0/0:19,0:18:45.04:0,45,673	1/1:3,0:2:2.98:21,3,0	1/1:9,1:7:6.01:67,6,0	1/1:8,0:8:2.64:20,3,0	1/1:58,11:56:29.93:312,30,0	./.	./.	./.	1/1:12,1:11:3.87:25,4,0	1/1:14,2:12:20.65:186,21,0	0/0:3,0:3:0.89:0,1,2	1/1:4,0:3:2.98:21,3,0
chr10	91065859	.	GCA	G	291.22	PASS	AB=0.948;AC=11;AF=0.289;AN=38;BaseQRankSum=3.448;DP=345;FS=2.385;HRun=0;HaplotypeScore=39.5416;InbreedingCoeff=0.2141;MQ=38.83;MQ0=34;MQRankSum=-1.425;QD=1.93;ReadPosRankSum=0.819;VQSLOD=1.2491;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,1:23:46.59:47,0,235	0/1:11,1:11:22.38:22,0,161	0/0:25,0:6:8.95:0,9,66	0/0:28,3:6:3.01:0,3,49	./.	./.	0/0:10,1:8:0.89:0,1,2	0/0:11,0:4:3.01:0,3,38	0/1:5,0:3:0:0,0,0	1/1:13,6:15:18.01:198,18,0	./.	0/0:6,0:4:2.99:0,3,23	0/1:2,1:2:0:0,0,0	0/1:12,0:8:0:0,0,0	0/0:24,0:21:30.09:0,30,458	./.	0/0:17,0:15:11.84:0,12,415	0/0:5,0:3:0:0,0,0	0/1:8,0:4:13.99:14,0,14	0/0:6,0:6:0:0,0,0	1/1:47,3:36:16.55:88,17,0	./.	./.	./.	0/0:11,0:9:3.85:0,4,22	0/1:18,0:12:5.64:32,0,6	./.	./.
chr10	91065873	.	ACG	A	142.58	PASS	AB=1.000;AC=9;AF=0.250;AN=36;BaseQRankSum=3.564;DP=364;FS=21.360;HRun=0;HaplotypeScore=29.8150;InbreedingCoeff=0.0668;MQ=34.20;MQ0=60;MQRankSum=-3.701;QD=0.99;ReadPosRankSum=-1.325;VQSLOD=-0.3782;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:22:18.46:18,0,238	0/1:13,0:12:6.64:7,0,184	./.	0/0:29,0:2:3.01:0,3,37	./.	./.	0/0:15,0:12:2.29:0,2,6	0/0:12,0:5:3.01:0,3,40	0/0:6,0:3:2.82:0,3,14	1/1:18,0:13:23.75:185,24,0	./.	0/0:9,0:5:2.89:0,3,23	1/1:4,0:3:0.28:2,0,0	./.	0/0:22,0:19:27.04:0,27,458	./.	0/0:16,0:13:14.91:0,15,387	0/0:7,0:3:2.51:0,3,17	0/1:13,0:3:2.90:3,0,18	0/0:8,0:7:0.47:0,0,1	0/1:59,0:32:3.94:4,0,17	./.	./.	./.	0/0:15,1:13:5.05:0,5,38	0/1:14,0:8:6.94:27,0,7	0/0:1,0:1:2.74:0,3,12	./.
chr10	91065903	.	ACG	A	39.94	PASS	AB=0.974;AC=14;AF=0.368;AN=38;BaseQRankSum=3.734;DP=398;FS=7.794;HRun=0;HaplotypeScore=36.7005;InbreedingCoeff=0.0403;MQ=34.79;MQ0=61;MQRankSum=-2.580;QD=0.22;ReadPosRankSum=-2.580;VQSLOD=-0.5789;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:14.77:0,15,588	0/1:10,0:10:8.02:8,0,112	0/0:51,0:4:6.94:0,7,35	0/1:40,0:4:1.24:1,0,12	./.	./.	0/1:14,1:11:16.40:16,0,23	0/0:15,0:8:6.86:0,7,155	1/1:3,0:1:0.89:2,1,0	0/1:14,0:8:2.69:18,0,3	./.	0/0:14,1:12:2.62:0,3,17	1/1:5,0:3:0.89:2,1,0	0/1:11,1:8:3.87:4,0,5	0/0:19,0:15:24.63:0,25,320	./.	0/0:19,0:16:32.87:0,33,480	1/1:4,0:2:5.87:35,6,0	0/1:14,0:4:13.96:14,0,55	./.	0/1:48,1:22:0:0,0,0	./.	./.	./.	0/0:13,0:12:2.98:0,3,21	0/1:18,1:8:30.41:47,0,30	0/0:7,0:7:0.41:0,0,25	./.
chr10	91065905	.	G	GCA	391.42	PASS	AB=0.818;AC=20;AF=0.500;AN=40;BaseQRankSum=1.194;DP=386;FS=25.202;HRun=0;HaplotypeScore=38.0676;InbreedingCoeff=0.3846;MQ=34.73;MQ0=58;MQRankSum=-4.949;QD=2.36;ReadPosRankSum=-1.915;VQSLOD=0.0238;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:32.97:0,33,424	0/0:10,0:10:4.73:0,5,71	0/0:55,0:4:11.86:0,12,96	0/0:42,0:4:5.80:0,6,33	./.	./.	1/1:13,4:12:4.78:25,5,0	0/1:5,9:8:17.98:242,0,18	1/1:4,0:2:1.55:4,2,0	0/0:11,1:7:5.20:0,5,24	./.	0/1:13,2:12:0:0,0,0	1/1:6,0:4:0.89:2,1,0	1/1:12,0:9:5.50:43,6,0	0/0:16,0:13:9.50:0,10,118	0/0:10,0:8:0.47:0,0,1	0/0:16,0:13:32.96:0,33,368	1/1:3,0:2:2.66:20,3,0	0/1:13,1:4:24.80:75,0,25	./.	0/1:36,8:23:0:0,0,0	./.	./.	./.	1/1:10,1:10:3.01:34,3,0	1/1:15,3:8:5.61:55,6,0	1/1:7,0:7:4.72:16,5,0	./.
chr10	91065914	.	C	CG	275.51	PASS	AB=0.930;AC=18;AF=0.429;AN=42;BaseQRankSum=4.890;DP=401;FS=6.923;HRun=0;HaplotypeScore=48.1916;InbreedingCoeff=0.2627;MQ=35.05;MQ0=41;MQRankSum=-3.085;QD=1.89;ReadPosRankSum=-3.223;VQSLOD=0.0417;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:36.10:0,36,497	0/0:7,0:7:6.02:0,6,81	0/0:64,0:6:11.71:0,12,134	0/0:47,1:4:5.81:0,6,65	./.	1/1:2,0:2:3.01:47,3,0	0/0:12,3:11:3.88:0,4,61	0/0:14,0:8:19.47:0,19,142	0/1:6,1:6:14.05:19,0,14	0/1:10,1:8:4.89:12,0,5	./.	1/1:10,1:13:2.68:13,3,0	1/1:3,2:4:6.02:93,6,0	0/1:10,0:9:22.23:22,0,24	0/0:15,0:13:13.70:0,14,206	1/1:8,1:7:3.01:34,3,0	0/0:14,0:14:36.01:0,36,477	0/1:3,0:3:9.59:10,0,34	0/0:16,0:7:5.85:0,6,157	./.	0/1:42,0:28:0.01:0,0,0	./.	./.	./.	1/1:6,0:5:2.94:18,3,0	0/1:19,0:12:58.74:62,0,59	1/1:6,0:11:12.40:85,12,0	./.
chr10	91065934	.	G	GCA	517.58	PASS	AB=0.956;AC=17;AF=0.354;AN=48;BaseQRankSum=3.402;DP=504;FS=9.237;HRun=0;HaplotypeScore=77.5290;InbreedingCoeff=0.2252;MQ=36.23;MQ0=35;MQRankSum=-4.028;QD=1.97;ReadPosRankSum=1.468;VQSLOD=0.7727;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:21.46:0,21,316	0/0:7,0:7:18.06:0,18,221	0/0:41,0:6:2.59:0,3,11	0/0:41,0:6:5.78:0,6,74	0/1:8,2:10:30.90:43,0,31	0/0:8,0:7:6.02:0,6,73	1/1:13,2:12:2.84:14,3,0	0/1:18,0:8:6.58:7,0,20	1/1:14,3:18:2.93:19,3,0	0/1:18,0:15:43.29:43,0,214	./.	0/1:32,0:28:28.73:29,0,58	0/0:14,1:13:11.68:0,12,146	1/1:24,0:21:3.01:43,3,0	0/0:16,0:14:9.03:0,9,111	0/0:10,1:9:1.25:0,1,3	0/0:18,0:19:35.93:0,36,406	0/0:7,0:8:10.51:0,11,145	0/1:17,1:9:33.05:119,0,33	./.	1/1:62,3:47:2.95:40,3,0	0/0:11,0:11:3.01:0,3,37	./.	0/0:10,0:9:2.81:0,3,36	0/0:8,0:7:3.01:0,3,37	1/1:22,1:16:14.20:168,14,0	1/1:12,2:13:6.68:139,7,0	./.
chr10	91065944	.	A	ACG	581.06	PASS	AB=0.845;AC=10;AF=0.208;AN=48;BaseQRankSum=2.283;DP=585;FS=20.584;HRun=0;HaplotypeScore=91.5561;InbreedingCoeff=-0.3072;MQ=30.72;MQ0=54;MQRankSum=-3.613;QD=2.01;ReadPosRankSum=1.450;VQSLOD=0.4636;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:26:39.62:0,40,534	0/0:7,0:7:18.06:0,18,274	0/0:32,0:3:5.51:0,6,50	0/0:43,0:4:9.01:0,9,116	0/1:6,6:10:17.94:18,0,40	0/0:11,0:9:6:0,6,69	0/0:18,0:14:1.42:0,1,4	0/1:28,0:12:58.58:59,0,122	0/1:21,2:19:8.11:8,0,29	0/0:20,0:17:14.58:0,15,422	./.	0/1:28,9:31:53.71:54,0,81	0/0:16,0:14:4.66:0,5,163	0/1:22,5:24:19.83:50,0,20	0/0:15,0:14:17.99:0,18,208	0/0:15,0:12:4.52:0,5,24	0/0:27,0:27:57.32:0,57,668	0/1:9,0:9:6.87:7,0,173	0/1:15,3:8:65.71:139,0,66	./.	0/1:66,16:60:30.54:50,0,31	0/0:13,0:13:3.01:0,3,46	./.	0/0:12,0:10:5.38:0,5,54	0/0:10,0:9:3.01:0,3,46	0/1:26,5:22:99:203,0,137	0/1:11,8:17:31.50:122,0,32	./.
chr10	91065945	.	CACACGCAT	C	139.08	PASS	AB=0.946;AC=7;AF=0.140;AN=50;BaseQRankSum=1.826;DP=585;FS=2.327;HRun=0;HaplotypeScore=101.6171;InbreedingCoeff=-0.0845;MQ=30.84;MQ0=56;MQRankSum=-3.969;QD=0.88;ReadPosRankSum=-2.352;VQSLOD=1.7929;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:25:39.86:0,40,1116	0/0:7,0:7:17.89:0,18,621	1/1:30,0:3:0.61:1,1,0	0/0:41,0:3:6.02:0,6,151	0/0:12,0:10:6.02:0,6,173	0/0:12,0:10:6.02:0,6,171	0/0:17,0:13:2.86:0,3,24	0/1:28,2:14:99:108,0,450	0/0:20,3:19:5.12:0,5,107	0/1:21,0:18:42.61:43,0,956	./.	0/0:34,4:32:10.61:0,11,121	0/0:16,0:14:9.85:0,10,370	0/1:23,4:24:7.26:7,0,28	0/0:15,0:14:21.54:0,22,511	0/0:15,0:12:1.11:0,1,51	0/0:28,0:28:56.43:0,56,1578	0/0:9,0:9:13.02:0,13,269	0/0:17,0:7:2.13:0,2,254	0/0:12,1:11:1.25:0,1,3	0/0:83,3:62:11.73:0,12,145	0/0:13,0:13:6.02:0,6,171	./.	0/0:12,0:10:6.01:0,6,135	0/0:10,0:9:2.88:0,3,111	0/1:28,1:18:73.46:73,0,470	0/1:17,1:17:12.40:12,0,164	./.
chr10	91065971	.	CGCAT	C	77.66	PASS	AB=0.930;AC=5;AF=0.100;AN=50;BaseQRankSum=4.041;DP=747;FS=6.070;HRun=0;HaplotypeScore=111.2032;InbreedingCoeff=0.0884;MQ=29.60;MQ0=79;MQRankSum=-3.474;QD=0.84;ReadPosRankSum=-2.750;VQSLOD=0.6321;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:30:50.72:0,51,1281	0/0:8,0:8:15.04:0,15,308	0/0:44,0:4:11.87:0,12,166	0/0:52,0:5:9.88:0,10,158	0/0:15,0:12:6.02:0,6,95	0/0:21,0:17:5.85:0,6,101	1/1:31,0:24:3.46:11,3,0	0/0:49,0:28:56.88:0,57,1048	0/0:27,0:21:8.59:0,9,145	0/1:27,3:25:93.08:93,0,781	./.	0/0:41,0:34:9.35:0,9,222	0/1:17,2:17:44.01:44,0,246	0/0:32,1:30:4.54:0,5,74	0/0:13,0:13:17.93:0,18,394	0/0:15,2:14:2.43:0,2,85	0/0:31,0:31:74.32:0,74,1743	0/1:12,0:10:34.19:34,0,72	0/0:27,0:16:34.95:0,35,740	0/0:11,0:10:1.25:0,1,3	0/0:106,0:80:9.53:0,10,129	0/0:14,2:16:6.02:0,6,173	./.	0/0:17,0:14:6.01:0,6,110	0/0:8,1:9:2.79:0,3,86	0/0:29,0:21:53.57:0,54,925	0/0:24,0:23:22.85:0,23,343	./.
chr10	91065980	.	A	ACG	395.47	PASS	AB=0.944;AC=14;AF=0.280;AN=50;BaseQRankSum=3.113;DP=734;FS=27.641;HRun=0;HaplotypeScore=102.2423;InbreedingCoeff=-0.0086;MQ=29.29;MQ0=83;MQRankSum=-3.442;QD=1.01;ReadPosRankSum=0.312;VQSLOD=0.3461;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:27:47.70:0,48,595	0/0:9,0:9:13.13:0,13,107	0/0:41,0:4:12.04:0,12,157	0/0:43,0:3:9.03:0,9,125	0/0:14,1:12:2.50:0,2,23	0/0:21,0:18:6.02:0,6,74	0/0:31,0:24:5.44:0,5,24	0/1:49,0:28:99:208,0,220	1/1:23,4:21:5.76:69,6,0	0/1:29,0:23:11.15:11,0,341	./.	1/1:34,6:33:1.33:16,1,0	0/0:20,0:18:21.96:0,22,188	0/1:26,7:28:5.05:5,0,12	0/0:11,0:11:15.05:0,15,212	0/0:17,0:15:4.26:0,4,46	0/0:31,0:30:72.92:0,73,893	0/1:13,0:11:0.45:0,0,88	0/1:22,1:14:67.61:68,0,132	1/1:9,2:10:2.60:10,3,0	0/1:112,5:76:19.26:19,0,56	0/0:16,0:16:6.02:0,6,75	./.	0/0:21,0:16:2.78:0,3,36	0/0:10,0:10:3:0,3,25	0/1:27,2:20:66.71:67,0,233	0/1:18,3:20:55.70:56,0,92	./.
chr10	91065982	.	GCACACACA	G	411.51	PASS	AB=0.943;AC=8;AF=0.167;AN=48;BaseQRankSum=3.122;DP=725;FS=39.605;HRun=0;HaplotypeScore=117.9224;InbreedingCoeff=-0.0606;MQ=29.67;MQ0=80;MQRankSum=-3.875;QD=1.54;ReadPosRankSum=-0.511;VQSLOD=0.6022;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:28:47.80:0,48,1391	0/0:12,0:12:15.03:0,15,309	0/0:38,0:4:12.03:0,12,228	0/0:41,0:3:9.03:0,9,156	0/0:11,1:12:2.46:0,2,23	0/0:23,0:19:8.95:0,9,146	0/0:32,0:24:5.25:0,5,24	0/1:45,1:27:65.15:300,0,65	1/1:27,0:22:5.93:65,6,0	0/0:28,0:22:13.50:0,13,411	./.	0/0:33,3:32:3.31:0,3,15	0/0:20,0:18:9.45:0,9,271	0/0:33,0:27:1.31:0,1,4	0/0:10,0:10:9.48:0,9,299	0/0:18,0:16:3.45:0,3,46	0/0:32,0:31:74.94:0,75,2098	0/1:10,0:10:19.08:19,0,79	0/1:20,0:12:17.18:17,0,76	./.	0/1:101,2:73:9.85:10,0,84	0/0:16,0:16:5.97:0,6,65	./.	0/0:22,0:17:3.01:0,3,37	0/0:10,0:10:2.99:0,3,25	0/1:27,1:19:96.11:96,0,229	0/1:20,1:20:26.06:26,0,118	./.
chr10	91065988	.	A	ACG	508.84	PASS	AB=0.934;AC=11;AF=0.229;AN=48;BaseQRankSum=3.350;DP=724;FS=39.168;HRun=0;HaplotypeScore=100.0317;InbreedingCoeff=-0.0525;MQ=29.67;MQ0=79;MQRankSum=-5.319;QD=1.57;ReadPosRankSum=1.547;VQSLOD=0.1611;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:28:49.16:0,49,657	0/0:11,0:10:14.96:0,15,157	0/0:34,0:4:12.03:0,12,159	0/0:36,0:3:9.03:0,9,131	0/0:13,3:13:2.50:0,2,23	0/0:22,0:19:8.96:0,9,92	0/0:30,0:24:5.60:0,6,41	0/1:40,1:24:89.45:268,0,89	1/1:25,3:22:5.69:45,6,0	0/1:28,0:26:64.78:65,0,349	./.	0/0:33,2:29:3.19:0,3,15	0/0:21,0:21:22.04:0,22,198	1/1:28,2:25:2.59:10,3,0	0/0:10,0:10:9.48:0,9,176	0/0:22,0:19:7.21:0,7,74	0/0:33,0:31:81.14:0,81,1062	0/1:15,0:12:15.96:16,0,120	0/1:19,0:10:48.63:49,0,69	./.	0/1:91,20:70:10.87:11,0,82	0/0:16,0:19:6.02:0,6,78	./.	0/0:23,0:18:2.81:0,3,37	0/0:11,0:10:3:0,3,25	0/1:28,2:19:99:121,0,203	0/1:16,1:16:41.63:56,0,42	./.
chr10	91065992	.	A	ACG	925.97	PASS	AB=0.917;AC=12;AF=0.250;AN=48;BaseQRankSum=1.898;DP=695;FS=49.075;HRun=0;HaplotypeScore=91.4874;InbreedingCoeff=0.0834;MQ=29.48;MQ0=72;MQRankSum=-5.230;QD=3.06;ReadPosRankSum=1.690;VQSLOD=0.1284;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:27:48.09:0,48,653	0/0:11,0:9:14.94:0,15,153	0/0:33,0:5:15:0,15,174	0/0:34,0:3:9.03:0,9,130	1/1:15,0:12:2.80:13,3,0	0/0:23,0:19:8.96:0,9,89	0/0:33,0:24:5.60:0,6,41	0/1:27,13:24:88.15:655,0,88	1/1:23,3:20:5.79:47,6,0	0/1:27,0:23:8.02:8,0,335	./.	0/0:32,2:28:3.35:0,3,25	0/0:24,0:22:16.42:0,16,158	1/1:26,2:21:2.84:14,3,0	0/0:11,0:11:15.05:0,15,225	0/0:22,0:19:8.61:0,9,76	0/0:33,0:31:78.13:0,78,1037	0/0:15,0:11:0.16:0,0,89	0/1:14,2:9:60.15:116,0,60	./.	0/1:103,5:66:11.39:11,0,82	0/0:18,0:17:6.02:0,6,78	./.	0/0:23,0:18:2.96:0,3,38	0/0:11,0:9:0:0,0,0	0/1:28,1:19:99:144,0,176	0/1:13,1:13:24.36:49,0,24	./.
chr10	91066028	.	ACATG	A	176.37	PASS	AB=0.982;AC=15;AF=0.357;AN=42;BaseQRankSum=4.055;DP=352;FS=5.098;HRun=0;HaplotypeScore=58.5516;InbreedingCoeff=0.2682;MQ=32.34;MQ0=28;MQRankSum=-3.254;QD=1.24;ReadPosRankSum=-0.814;VQSLOD=0.8866;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:27.07:0,27,668	0/0:11,0:9:18.06:0,18,454	0/0:25,0:3:8.24:0,8,109	0/1:41,0:3:24.41:24,0,52	./.	0/0:11,0:10:2.63:0,3,22	0/0:23,1:19:5.62:0,6,67	1/1:5,1:2:3.01:58,3,0	./.	0/1:20,1:18:99:146,0,155	./.	0/1:11,0:11:0:0,0,0	0/1:13,0:12:6.99:7,0,41	0/1:6,0:5:0:0,0,0	0/0:12,0:11:19.81:0,20,509	0/0:9,0:9:2.46:0,2,34	0/0:33,0:32:65.56:0,66,1558	0/0:7,0:5:9.32:0,9,72	1/1:1,0:1:3:26,3,0	./.	0/1:22,0:10:0:0,0,0	0/0:11,0:10:3.01:0,3,42	./.	./.	0/1:10,1:10:0:0,0,0	1/1:6,0:2:2.60:10,3,0	1/1:4,0:4:2.94:18,3,0	./.
chr10	91066030	.	ATG	A	179.42	PASS	AB=0.923;AC=14;AF=0.368;AN=38;BaseQRankSum=4.498;DP=275;FS=4.493;HRun=0;HaplotypeScore=46.0033;InbreedingCoeff=0.1927;MQ=33.40;MQ0=19;MQRankSum=-3.370;QD=1.85;ReadPosRankSum=-0.936;VQSLOD=1.1382;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:35.31:0,35,594	0/0:9,0:7:18.06:0,18,341	0/0:25,0:3:8.24:0,8,99	0/1:40,1:5:33:33,0,72	./.	0/0:8,1:8:2.79:0,3,40	0/0:16,2:14:5.63:0,6,80	1/1:3,0:2:2.97:20,3,0	./.	0/1:15,2:15:99:126,0,154	./.	0/1:1,0:1:0:0,0,0	0/1:7,2:8:4.31:4,0,29	./.	0/0:12,0:11:19.77:0,20,403	0/0:6,1:7:2.57:0,3,33	0/0:30,0:29:65.67:0,66,1293	0/1:5,0:4:11.70:12,0,30	1/1:1,0:1:2.90:16,3,0	./.	0/1:8,1:5:0:0,0,0	0/0:7,1:7:3.01:0,3,33	./.	./.	./.	1/1:2,2:1:3.01:49,3,0	1/1:3,0:3:3.01:35,3,0	./.
chr10	91066046	.	GCA	G	49.89	PASS	AB=0.928;AC=16;AF=0.400;AN=40;BaseQRankSum=1.368;DP=321;FS=0.000;HRun=0;HaplotypeScore=50.3583;InbreedingCoeff=0.0496;MQ=32.00;MQ0=24;MQRankSum=-0.141;QD=0.34;ReadPosRankSum=0.761;VQSLOD=1.1424;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,1:19:7.45:7,0,326	0/0:10,0:8:12.03:0,12,152	0/0:26,0:5:8.99:0,9,92	0/0:53,0:6:10.42:0,10,121	./.	1/1:10,0:10:0.30:1,0,0	1/1:19,0:14:1.82:5,2,0	./.	./.	0/1:16,0:16:11.42:11,0,50	./.	0/0:3,0:3:2.74:0,3,12	0/1:11,0:10:4.04:4,0,14	0/0:5,0:3:2.96:0,3,19	0/1:13,1:12:6.67:7,0,169	1/1:8,0:8:1.55:4,2,0	0/1:23,2:25:87.18:87,0,504	1/1:7,0:4:2.28:13,2,0	0/0:3,0:3:2.35:0,2,8	./.	0/0:16,0:8:1.82:0,2,5	1/1:9,0:9:0.47:1,0,0	./.	0/0:21,0:20:0:0,0,1	0/0:12,0:12:2.96:0,3,19	0/1:5,1:3:5.20:14,0,5	./.	./.
chr10	91066060	.	ACACACG	A	1080.09	PASS	AB=0.978;AC=25;AF=0.500;AN=50;BaseQRankSum=1.447;DP=383;FS=0.712;HRun=0;HaplotypeScore=84.4073;InbreedingCoeff=0.4200;MQ=34.93;MQ0=24;MQRankSum=-2.711;QD=6.51;ReadPosRankSum=-3.142;VQSLOD=1.1000;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:47.58:0,48,1091	0/0:10,0:7:12.04:0,12,238	0/0:18,0:4:9.03:0,9,156	0/0:37,0:5:6:0,6,132	./.	1/1:10,1:11:12.13:89,12,0	1/1:22,2:20:5.15:96,5,0	./.	1/1:5,0:4:3.41:19,3,0	1/1:17,2:17:18.55:288,19,0	1/1:5,4:9:6.02:97,6,0	0/1:10,0:9:5.18:5,0,51	1/1:7,1:9:13.90:146,14,0	0/0:9,0:7:4.71:0,5,34	0/0:18,0:16:32.01:0,32,538	1/1:8,3:10:6.02:110,6,0	0/0:29,0:29:50.19:0,50,1341	0/1:7,1:5:9.02:102,0,9	0/1:10,0:10:2.66:72,0,3	0/0:5,0:5:0.47:0,0,1	0/0:22,0:12:2.80:0,3,13	1/1:10,3:12:5.84:81,6,0	./.	0/0:9,22:28:3.46:0,3,25	1/1:13,2:13:6.85:94,7,0	0/1:14,0:11:4:15,0,4	0/1:4,0:4:10.15:10,0,13	1/1:4,0:3:2.97:20,3,0
chr10	91066062	.	ACACG	A	786.20	PASS	AB=0.980;AC=29;AF=0.558;AN=52;BaseQRankSum=2.765;DP=384;FS=1.488;HRun=0;HaplotypeScore=80.8001;InbreedingCoeff=0.4395;MQ=35.12;MQ0=26;MQRankSum=-2.146;QD=4.18;ReadPosRankSum=-2.926;VQSLOD=1.3311;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:47.40:0,47,804	0/0:10,0:7:12.04:0,12,240	0/0:17,0:4:9.03:0,9,133	0/0:32,0:5:5.99:0,6,139	./.	1/1:11,0:11:8.40:63,8,0	1/1:23,1:19:2.68:60,3,0	./.	1/1:4,1:4:3.41:19,3,0	1/1:17,2:17:11.81:182,12,0	1/1:8,0:8:5.49:35,5,0	0/1:11,0:10:5.18:5,0,51	1/1:9,0:9:13.50:88,14,0	0/1:8,1:7:3.23:3,0,27	0/0:17,0:15:25.94:0,26,369	1/1:12,0:10:5.99:50,6,0	0/0:28,0:28:38.53:0,39,1008	0/1:10,0:7:2.59:87,0,3	1/1:11,0:10:20.21:125,20,0	0/0:5,0:5:0.94:0,1,2	0/0:23,1:13:1.55:0,2,4	1/1:13,0:12:5.76:46,6,0	0/1:9,0:8:5.90:19,0,6	0/0:31,0:28:2.94:0,3,19	1/1:13,0:12:7.83:44,8,0	1/1:14,0:11:17.19:77,17,0	0/1:5,0:5:9.07:31,0,9	1/1:3,1:3:2.97:20,3,0
chr10	91066066	.	GCGCACA	G	736.75	PASS	AB=0.927;AC=18;AF=0.346;AN=52;BaseQRankSum=5.075;DP=391;FS=4.809;HRun=0;HaplotypeScore=89.4281;InbreedingCoeff=0.1120;MQ=35.62;MQ0=30;MQRankSum=-4.464;QD=4.07;ReadPosRankSum=-0.565;VQSLOD=1.4360;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:53.79:0,54,1358	0/0:9,0:7:8.90:0,9,122	0/0:10,0:4:8.76:0,9,76	0/0:26,0:4:1.23:0,1,44	./.	0/0:9,0:10:7.55:0,8,33	0/1:25,0:20:5.18:5,0,50	./.	0/1:6,0:4:0.36:31,0,0	0/1:17,0:16:51.71:110,0,52	1/1:9,0:9:1.74:5,2,0	0/1:6,7:12:35.77:36,0,51	0/1:9,0:9:12.54:13,0,40	0/0:8,1:8:8.84:0,9,48	0/0:17,0:15:22.21:0,22,537	0/1:12,0:10:12.24:17,0,12	0/0:29,0:27:54.11:0,54,1400	0/1:11,0:8:26.50:57,0,26	1/1:3,7:9:21.29:215,21,0	0/0:5,0:5:0.47:0,0,1	0/1:26,0:13:0:0,0,0	0/1:14,0:13:14.21:15,0,14	0/0:10,0:9:8.89:0,9,59	0/0:32,0:29:3.33:0,3,42	0/0:13,0:12:9.84:0,10,106	1/1:15,2:13:10.86:255,11,0	0/1:3,2:5:8.96:67,0,9	1/1:1,3:3:3.01:59,3,0
chr10	91066077	.	C	CGCAT	274.48	PASS	AB=0.930;AC=8;AF=0.148;AN=54;BaseQRankSum=4.565;DP=532;FS=7.659;HRun=0;HaplotypeScore=117.6667;InbreedingCoeff=0.2728;MQ=34.77;MQ0=53;MQRankSum=-4.192;QD=2.92;ReadPosRankSum=-1.341;VQSLOD=0.9367;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:30:63.16:0,63,1168	0/0:8,0:7:12.04:0,12,197	0/0:6,0:3:9.02:0,9,109	0/0:17,0:3:6:0,6,73	./.	0/0:15,0:14:14.92:0,15,274	0/0:30,1:25:19.56:0,20,285	0/0:18,0:6:8.85:0,9,79	0/1:14,1:10:0.32:0,0,76	0/0:27,0:22:53.12:0,53,713	0/0:15,0:14:9.03:0,9,174	1/1:15,4:16:2.99:25,3,0	0/0:15,0:14:26.66:0,27,395	0/0:14,3:13:2.76:0,3,39	0/0:14,0:13:24.07:0,24,464	0/0:22,0:18:17.94:0,18,262	0/0:32,0:30:72.24:0,72,1347	0/0:14,0:12:21:0,21,313	0/1:22,0:11:12.59:13,0,172	0/0:9,2:11:3.46:0,3,25	0/0:52,2:28:8.67:0,9,61	0/0:18,0:16:8.48:0,8,155	0/0:11,0:9:9.02:0,9,150	0/0:35,0:31:9.40:0,9,122	0/0:17,0:14:15.05:0,15,297	0/1:18,7:19:74.95:258,0,75	1/1:3,2:5:5.99:85,6,0	0/1:8,0:4:3.17:13,0,3
chr10	91066082	.	A	ACG	435.94	PASS	AB=0.922;AC=13;AF=0.241;AN=54;BaseQRankSum=5.161;DP=571;FS=6.755;HRun=0;HaplotypeScore=114.4324;InbreedingCoeff=0.3412;MQ=35.40;MQ0=55;MQRankSum=-4.105;QD=2.02;ReadPosRankSum=-4.442;VQSLOD=-0.3597;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:68.92:0,69,869	0/0:8,0:7:9.02:0,9,114	0/0:5,0:3:5.92:0,6,43	0/0:11,0:1:3:0,3,26	./.	0/0:15,0:14:20.89:0,21,244	0/0:32,0:26:13.26:0,13,193	0/1:23,0:10:18.38:18,0,53	0/1:16,1:12:23.62:76,0,24	0/0:32,0:25:51.35:0,51,424	0/0:13,0:12:8.80:0,9,116	1/1:19,4:19:14.15:79,14,0	0/0:17,0:16:29.60:0,30,303	0/1:16,3:15:20.86:21,0,34	0/0:15,0:14:30.03:0,30,385	0/0:26,0:21:23.91:0,24,225	0/0:33,0:31:63.11:0,63,832	0/0:16,0:13:19.90:0,20,177	0/1:23,0:11:29.04:51,0,29	1/1:9,2:11:3.91:22,4,0	1/1:65,2:35:11.90:90,12,0	0/0:18,0:16:5.62:0,6,71	0/0:12,0:10:12.01:0,12,141	0/0:38,0:33:12.47:0,12,87	0/0:16,0:13:15.28:0,15,224	0/1:21,7:23:9.65:191,0,10	1/1:3,2:5:7.64:47,8,0	0/0:7,0:4:5.44:0,5,27
chr10	91071058	.	C	CAATAAT	909.41	PASS	AB=0.807;AC=14;AF=0.304;AN=46;BaseQRankSum=0.378;DP=297;FS=3.625;HRun=0;HaplotypeScore=65.0167;InbreedingCoeff=0.5196;MQ=57.50;MQ0=0;MQRankSum=-3.191;QD=14.44;ReadPosRankSum=-2.839;VQSLOD=1.0661;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:44.93:0,45,820	0/0:6,0:6:9.02:0,9,148	./.	./.	0/0:18,0:18:11.25:0,11,189	0/1:6,0:12:12.37:12,0,36	./.	0/0:28,0:28:15.03:0,15,237	0/0:6,0:7:6.02:0,6,103	1/1:7,1:9:8.98:209,9,0	1/1:3,2:5:6.02:137,6,0	0/0:10,0:10:18.06:0,18,364	1/1:6,0:6:3.01:93,3,0	0/0:8,0:8:5.93:0,6,78	0/0:6,0:6:3.01:0,3,61	1/1:5,1:6:3.01:38,3,0	0/0:22,0:22:39.12:0,39,753	0/0:23,0:26:39.10:0,39,730	0/0:18,0:17:15.05:0,15,303	0/0:9,0:9:12.04:0,12,231	0/0:13,0:13:14.88:0,15,252	1/1:4,1:5:3.01:96,3,0	./.	./.	1/1:10,0:10:21.06:389,21,0	0/1:9,1:10:84.45:84,0,159	0/0:11,0:11:6.02:0,6,121	0/0:4,0:4:7.94:0,8,32
chr10	91075290	.	CG	C	7030.44	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=9.775;DP=578;FS=0.717;HRun=1;HaplotypeScore=64.4659;InbreedingCoeff=0.9687;MQ=88.84;MQ0=1;MQRankSum=-2.034;QD=34.98;ReadPosRankSum=1.745;VQSLOD=4.8815;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,1815	0/0:3,0:3:5.99:0,6,70	0/0:21,0:21:54.56:0,55,777	0/0:24,0:24:49.60:0,50,709	0/0:16,0:16:45.12:0,45,669	1/1:0,15:15:39.13:545,39,0	1/1:0,29:29:75.25:1049,75,0	0/0:18,0:18:45.08:0,45,624	0/0:25,0:25:69.22:0,69,1072	1/1:0,17:17:45.13:608,45,0	1/1:0,7:7:15.04:195,15,0	0/0:28,0:28:81.20:0,81,1229	1/1:0,18:18:48.16:671,48,0	0/0:22,0:22:60.20:0,60,958	0/0:23,0:23:69.24:0,69,1102	1/1:0,31:31:90.30:1258,90,0	0/0:26,0:26:75.22:0,75,1137	1/1:0,26:26:69.23:965,69,0	0/0:20,0:20:60.20:0,60,936	0/0:8,0:8:21.07:0,21,330	0/0:52,0:52:99:0,138,2173	1/1:0,10:10:9.01:126,9,0	1/1:2,6:8:12.04:168,12,0	1/1:0,30:30:84.24:1153,84,0	1/1:0,10:9:21.07:294,21,0	0/0:19,0:19:57.16:0,57,827	0/0:19,0:19:57.19:0,57,903	0/0:11,0:11:33.11:0,33,527
chr10	91078079	.	TTTTTTG	T	5069.60	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=12.366;DP=562;FS=2.129;HRun=0;HaplotypeScore=117.6219;InbreedingCoeff=0.9736;MQ=67.35;MQ0=2;MQRankSum=-11.464;QD=28.97;ReadPosRankSum=-0.586;VQSLOD=4.5941;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:90.26:0,90,2505	0/0:11,0:11:22.32:0,22,594	0/0:25,0:19:15.05:0,15,415	0/0:22,0:16:15.46:0,15,162	0/0:36,0:36:87.28:0,87,2484	1/1:4,9:13:18.06:365,18,0	1/1:0,7:7:15.05:304,15,0	0/0:31,0:31:39.12:0,39,1049	0/0:16,0:16:36.11:0,36,1038	1/1:10,9:19:26.20:512,26,0	1/1:9,18:27:51.09:901,51,0	0/0:16,0:16:30.09:0,30,838	1/1:5,7:12:18.06:365,18,0	0/0:16,0:16:30.10:0,30,916	0/0:20,0:20:45.15:0,45,1272	1/1:3,14:17:21.07:421,21,0	0/0:33,0:31:81.28:0,81,2550	1/1:11,6:17:12.04:244,12,0	0/0:19,0:19:27.97:0,28,754	0/0:24,0:24:42.12:0,42,1076	0/0:24,0:24:39.13:0,39,1035	1/1:4,11:15:30.06:543,30,0	1/1:5,9:14:20.19:407,20,0	1/1:5,7:12:9.03:183,9,0	1/1:8,14:22:42.14:826,42,0	0/0:25,0:25:42.14:0,42,1207	0/0:12,0:12:27.09:0,27,795	0/0:11,0:11:15.05:0,15,383
chr10	91079234	.	CGT	C	1102.01	PASS	AB=0.928;AC=28;AF=0.583;AN=48;BaseQRankSum=4.981;DP=603;FS=46.144;HRun=0;HaplotypeScore=93.4119;InbreedingCoeff=-0.1379;MQ=64.44;MQ0=10;MQRankSum=0.170;QD=2.59;ReadPosRankSum=4.751;VQSLOD=-0.1547;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,2:41:36.54:37,0,187	0/1:15,1:15:20.91:21,0,57	./.	./.	0/0:15,0:17:2.67:0,3,13	0/1:28,1:29:32.82:75,0,33	1/1:13,0:13:8.81:77,9,0	0/0:26,0:25:2.94:0,3,18	0/1:10,0:13:13.15:19,0,13	0/1:20,0:18:23.62:25,0,24	./.	1/1:23,0:31:0.88:87,1,0	0/1:21,1:20:8.08:8,0,265	1/1:7,0:10:9.14:38,9,0	0/1:16,2:18:11.11:11,0,224	1/1:10,7:19:20.62:207,21,0	0/0:16,0:15:10.90:0,11,150	0/1:19,2:21:20.81:82,0,21	./.	0/1:14,0:16:14.07:23,0,14	0/0:43,0:43:11.97:0,12,100	0/1:22,1:23:17.25:17,0,73	0/1:18,4:22:5.96:26,0,6	1/1:15,6:21:23.88:231,24,0	1/1:17,5:22:11.84:128,12,0	0/1:29,0:28:16.47:16,0,23	1/1:16,0:23:23.23:111,23,0	1/1:15,0:14:2.84:14,3,0
chr10	91079326	.	TC	T	9364.16	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-5.272;DP=659;FS=0.620;HRun=2;HaplotypeScore=124.7391;InbreedingCoeff=0.9994;MQ=82.38;MQ0=0;MQRankSum=-4.186;QD=35.34;ReadPosRankSum=2.379;VQSLOD=4.4163;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:73.86:0,74,1138	0/0:12,0:12:36.12:0,36,525	0/0:36,0:36:99:0,101,1498	0/0:21,0:20:60.12:0,60,862	1/1:0,24:24:69.22:896,69,0	0/0:25,0:24:66.05:0,66,957	0/0:15,0:15:24.06:0,24,339	1/1:1,38:39:99:1454,114,0	1/1:0,16:16:33.11:428,33,0	0/0:36,0:36:99:0,105,1574	0/0:19,0:19:44.89:0,45,670	1/1:2,29:31:84.27:1086,84,0	0/0:22,0:22:63.21:0,63,943	1/1:1,23:24:72.21:918,72,0	0/0:27,0:27:78.26:0,78,1167	0/0:17,0:17:36.12:0,36,540	0/0:13,0:13:36.12:0,36,535	0/0:16,0:16:30.10:0,30,445	1/1:1,11:12:33.10:415,33,0	1/1:0,30:30:84.27:1091,84,0	1/1:0,25:25:63.20:818,63,0	0/0:26,0:26:62.83:0,63,921	0/0:24,0:24:57.15:0,57,829	0/0:32,0:32:93.30:0,93,1367	0/0:22,0:22:63.20:0,63,919	1/1:0,29:29:84.27:1090,84,0	1/1:0,22:22:63.20:818,63,0	1/1:0,13:13:27.09:350,27,0
chr10	91079351	.	GTATA	G	10483.96	PASS	AB=0.512;AC=21;AF=0.375;AN=56;BaseQRankSum=-0.372;DP=724;FS=2.775;HRun=0;HaplotypeScore=164.0466;InbreedingCoeff=0.9331;MQ=73.28;MQ0=0;MQRankSum=-2.967;QD=38.54;ReadPosRankSum=7.583;VQSLOD=4.4954;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:35:89.10:0,89,2256	0/0:14,0:14:42.08:0,42,942	0/0:40,0:40:98.36:0,98,2027	0/0:26,0:25:71.50:0,72,1423	0/0:29,0:29:84.13:0,84,1839	1/1:0,25:25:54.19:1018,54,0	1/1:0,13:13:21.03:398,21,0	0/0:33,0:33:96.30:0,96,2345	0/0:25,0:25:57.17:0,57,1354	1/1:3,40:43:99:2142,120,0	1/1:0,17:17:27.01:511,27,0	0/0:35,0:35:99:0,99,2405	1/1:1,27:28:72.25:1356,72,0	0/0:29,0:29:87.24:0,87,2073	0/0:27,0:27:81.28:0,81,2097	0/1:1,20:21:8.02:643,0,8	0/0:16,0:16:45.14:0,45,1035	1/1:0,24:24:33.11:618,33,0	0/0:9,0:9:27.08:0,27,621	0/0:30,0:30:87.24:0,87,2041	0/0:28,0:28:63.20:0,63,1517	1/1:1,28:29:60.16:1132,60,0	1/1:1,23:24:41.97:795,42,0	1/1:0,20:20:45.15:852,45,0	1/1:0,28:28:54.19:1019,54,0	0/0:45,0:45:93.65:0,94,3085	0/0:23,0:23:66.21:0,66,1642	0/0:8,0:8:24.04:0,24,498
chr10	91081368	.	A	AAC	2216.21	PASS	AB=0.772;AC=38;AF=0.731;AN=52;BaseQRankSum=1.777;DP=478;FS=1.703;HRun=0;HaplotypeScore=96.1785;InbreedingCoeff=0.3156;MQ=59.09;MQ0=12;MQRankSum=-0.212;QD=6.62;ReadPosRankSum=-0.924;VQSLOD=2.7807;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:25:9.87:0,10,200	0/0:10,0:10:6.47:0,6,57	./.	./.	1/1:16,1:20:17.94:202,18,0	1/1:5,8:13:9.03:134,9,0	0/1:16,0:16:0:0,0,0	1/1:15,0:15:6.45:57,6,0	1/1:8,0:12:14.59:130,15,0	0/1:19,3:23:44.49:75,0,44	0/1:14,6:22:45.76:78,0,46	1/1:10,0:10:2.99:24,3,0	1/1:8,2:15:15.01:150,15,0	1/1:10,0:9:5.58:47,6,0	0/0:20,0:19:11.05:0,11,103	1/1:6,5:13:11.63:179,12,0	0/0:19,0:21:26.88:0,27,261	1/1:15,0:20:17.34:127,17,0	1/1:5,0:8:11.99:101,12,0	1/1:13,0:15:11.98:99,12,0	1/1:14,0:14:6:52,6,0	1/1:9,4:13:2.60:44,3,0	0/1:8,4:12:7.57:161,0,8	0/1:17,8:29:41.25:244,0,41	0/1:3,6:10:17.69:164,0,18	1/1:14,0:14:11.99:100,12,0	1/1:14,1:26:15.46:130,15,0	1/1:1,0:3:9:78,9,0
chr10	91082770	.	AAAC	A	8869.85	PASS	AB=0.688;AC=43;AF=0.768;AN=56;BaseQRankSum=11.427;DP=576;FS=4.116;HRun=0;HaplotypeScore=130.2769;InbreedingCoeff=0.8893;MQ=62.55;MQ0=2;MQRankSum=-6.017;QD=20.20;ReadPosRankSum=1.398;VQSLOD=4.6559;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.31:0,96,1863	0/0:7,0:7:18.06:0,18,361	0/0:33,0:25:33.11:0,33,621	0/0:17,0:13:15.05:0,15,278	1/1:0,16:16:45.15:632,45,0	1/1:6,0:22:44.64:314,45,0	1/1:8,0:17:15.35:106,15,0	1/1:14,21:35:60.20:843,60,0	1/1:6,19:25:45.15:632,45,0	1/1:5,0:23:47.62:335,48,0	1/1:5,0:22:42.13:294,42,0	1/1:9,13:22:39.13:544,39,0	1/1:4,0:14:23.70:168,24,0	1/1:6,16:22:39.13:548,39,0	0/0:20,0:20:45.15:0,45,890	1/1:5,0:21:44.64:314,45,0	0/0:27,0:27:54.19:0,54,1068	0/1:12,0:22:36.05:87,0,36	1/1:7,8:15:24.03:295,24,0	1/1:4,17:21:45.15:632,45,0	1/1:4,12:16:33.11:464,33,0	1/1:4,0:21:44.64:314,45,0	1/1:5,0:20:38.47:272,38,0	1/1:3,0:12:18.33:126,18,0	1/1:6,0:21:42.13:294,42,0	1/1:5,13:20:45.07:572,45,0	1/1:2,18:21:59.19:786,59,0	1/1:4,7:11:21.03:295,21,0
chr10	91084601	.	G	GACACACACACAC	5262.56	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-1.069;DP=678;FS=6.070;HRun=0;HaplotypeScore=244.1508;InbreedingCoeff=0.9141;MQ=67.66;MQ0=1;MQRankSum=-6.900;QD=25.18;ReadPosRankSum=-4.936;VQSLOD=2.1896;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:37.91:0,38,2711	0/0:9,0:9:27.08:0,27,721	0/0:50,0:39:64.28:0,64,1285	0/0:55,0:40:45.60:0,46,1081	1/1:4,8:23:1.11:344,1,0	0/0:26,0:26:63.17:0,63,1752	0/0:28,0:28:72.13:0,72,1713	1/1:17,0:17:27.93:443,28,0	1/1:2,4:16:12.04:599,12,0	0/0:27,0:26:50.86:0,51,1769	0/0:16,0:16:45.12:0,45,1198	1/1:6,9:23:9.03:528,9,0	0/0:16,0:16:45.11:0,45,1266	1/1:7,1:26:12.04:581,12,0	0/0:33,0:33:93.07:0,93,2046	0/0:22,0:22:60.19:0,60,1915	0/0:34,0:34:34.83:0,35,2451	0/0:30,0:30:78.13:0,78,1976	1/1:16,0:16:23.94:459,24,0	1/1:18,0:17:24.01:406,24,0	1/1:26,0:25:25.65:237,26,0	0/0:13,0:13:39.06:0,39,990	0/0:17,0:17:50.46:0,50,1236	0/0:34,0:34:96.23:0,96,2690	0/0:14,0:14:39.11:0,39,1131	1/1:17,0:17:32.06:1013,32,0	1/1:5,4:20:9.03:476,9,0	1/1:0,4:6:3.01:176,3,0
chr10	91084607	.	GAC	G	6586.52	PASS	AB=0.909;AC=24;AF=0.429;AN=56;BaseQRankSum=-0.264;DP=648;FS=8.064;HRun=0;HaplotypeScore=114.0523;InbreedingCoeff=0.7924;MQ=65.71;MQ0=1;MQRankSum=6.073;QD=23.11;ReadPosRankSum=2.028;VQSLOD=5.3510;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,1:39:42.07:0,42,1136	0/1:8,1:9:12.10:12,0,307	0/0:49,0:36:28.90:0,29,391	0/0:54,0:37:49.13:0,49,616	0/0:20,0:20:9.58:0,10,66	1/1:6,19:25:57.17:687,57,0	1/1:10,15:26:41.96:484,42,0	0/0:17,0:17:24.46:0,24,244	0/0:17,0:16:15.22:0,15,118	1/1:14,13:28:65.54:739,66,0	1/1:6,10:16:36.09:422,36,0	0/0:15,0:15:9:0,9,79	1/1:4,11:16:41.96:483,42,0	0/0:24,0:24:19.86:0,20,170	0/0:31,0:31:63.21:0,63,1012	1/1:3,16:20:50.99:593,51,0	0/1:31,3:34:35.79:36,0,931	1/1:9,19:29:65.99:756,66,0	0/0:14,0:14:20.43:0,20,216	0/0:17,0:16:9.31:0,9,59	0/0:26,0:25:8.97:0,9,88	1/1:6,7:13:33.09:386,33,0	1/1:7,11:18:45.12:529,45,0	1/1:10,26:36:84.24:1000,84,0	1/1:3,11:14:39.11:459,39,0	0/0:18,0:18:35.95:0,36,368	0/0:16,0:16:9:0,9,79	0/0:6,0:6:3:0,3,26
chr10	91084696	.	A	AC	10226.87	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-11.861;DP=579;FS=12.961;HRun=0;HaplotypeScore=59.8246;InbreedingCoeff=0.9984;MQ=87.08;MQ0=0;MQRankSum=-2.615;QD=44.85;ReadPosRankSum=1.590;VQSLOD=4.0870;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.31:0,93,1300	0/0:8,0:8:24.08:0,24,336	0/0:21,0:21:57.10:0,57,698	0/0:20,0:20:50.99:0,51,635	0/0:24,0:24:72.16:0,72,963	1/1:1,27:28:81.28:1291,81,0	1/1:1,15:16:39.13:623,39,0	0/0:26,0:26:69.23:0,69,964	0/0:14,0:14:36.12:0,36,502	1/1:2,33:36:99:1550,102,0	1/1:1,14:15:42.14:668,42,0	0/0:19,0:19:51.17:0,51,713	1/1:1,11:12:36.11:551,36,0	0/0:18,0:18:45.15:0,45,628	0/0:18,0:18:54.13:0,54,703	1/1:0,18:18:54.18:863,54,0	0/0:23,0:23:69.18:0,69,910	1/1:2,18:20:57.19:899,57,0	0/0:22,0:22:66.20:0,66,891	0/0:16,0:16:48.13:0,48,624	0/0:42,0:42:99:0,111,1510	1/1:2,25:27:78.25:1222,78,0	1/1:2,13:15:42.14:668,42,0	1/1:1,25:26:78.27:1244,78,0	1/1:1,14:15:42.13:647,42,0	0/0:21,1:22:18.24:0,18,819	0/0:14,0:14:42.10:0,42,565	0/0:12,0:12:27.08:0,27,360
chr10	91086448	.	CT	C	3189.57	PASS	AB=1.000;AC=45;AF=0.938;AN=48;BaseQRankSum=-2.422;DP=122;FS=5.560;HRun=1;HaplotypeScore=32.2418;InbreedingCoeff=0.1158;MQ=54.48;MQ0=0;MQRankSum=-2.365;QD=26.58;ReadPosRankSum=-0.042;VQSLOD=3.0902;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,6:6:12.04:166,12,0	./.	0/0:2,0:1:3.01:0,3,46	0/1:4,0:2:21.51:22,0,38	1/1:0,3:3:2.83:14,3,0	./.	1/1:4,8:11:27.05:354,27,0	1/1:2,6:8:18.05:235,18,0	1/1:1,0:1:3:25,3,0	1/1:1,1:2:6.01:66,6,0	1/1:1,1:2:2.99:27,3,0	1/1:0,3:3:9.03:125,9,0	1/1:0,2:2:6.02:83,6,0	1/1:1,4:5:12.04:165,12,0	./.	1/1:0,2:2:6.02:84,6,0	1/1:1,4:5:14.96:165,15,0	1/1:0,4:4:12.04:167,12,0	1/1:0,14:14:42.12:560,42,0	1/1:0,1:1:3.01:42,3,0	1/1:6,17:23:26.99:324,27,0	./.	1/1:0,2:2:3.01:42,3,0	1/1:0,10:10:18.06:250,18,0	1/1:0,2:2:6.02:84,6,0	1/1:1,4:5:12.04:167,12,0	1/1:0,2:2:6.02:84,6,0	1/1:0,1:1:3.01:42,3,0
chr10	91088520	.	GT	G	2378.80	PASS	AB=0.848;AC=26;AF=0.464;AN=56;BaseQRankSum=9.848;DP=593;FS=2.814;HRun=14;HaplotypeScore=90.0411;InbreedingCoeff=0.5815;MQ=61.82;MQ0=16;MQRankSum=1.584;QD=7.80;ReadPosRankSum=4.086;VQSLOD=3.1993;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,2:28:34.19:0,34,596	0/0:10,0:15:29.55:0,30,238	0/0:54,0:15:7.98:0,8,56	0/1:40,0:17:11.94:13,0,12	0/0:21,1:23:8.89:0,9,318	1/1:5,10:16:28.75:191,29,0	1/1:2,9:11:20.81:144,21,0	0/0:31,0:31:32.58:0,33,459	0/0:20,0:20:50.89:0,51,455	1/1:5,17:22:50.49:347,50,0	1/1:5,17:22:17.81:311,18,0	0/0:11,0:11:20.54:0,21,154	1/1:9,4:14:22.75:143,23,0	0/0:13,0:13:26.93:0,27,230	0/1:13,1:14:8.26:8,0,196	1/1:4,10:15:25.78:170,26,0	0/0:24,0:24:53.55:0,54,455	1/1:7,12:20:6.91:184,7,0	0/1:18,2:18:18.01:18,0,163	0/0:23,0:26:63.82:0,64,544	0/1:5,1:6:8.58:9,0,68	1/1:5,8:15:30.83:196,31,0	0/1:6,12:18:5.54:204,0,6	1/1:6,16:24:24.76:288,25,0	1/1:13,16:29:50.45:349,50,0	0/0:28,1:27:37.98:0,38,466	0/1:13,2:16:12:12,0,208	0/0:10,0:10:21.01:0,21,190
chr10	91088760	.	G	GTTT	7514.41	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=10.814;DP=555;FS=6.545;HRun=1;HaplotypeScore=209.5464;InbreedingCoeff=0.9655;MQ=62.35;MQ0=4;MQRankSum=-13.721;QD=41.75;ReadPosRankSum=-6.389;VQSLOD=1.6196;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,2434	0/0:7,0:7:21.07:0,21,370	0/0:18,0:17:51.17:0,51,819	0/0:28,0:20:46.92:0,47,860	1/1:2,10:11:29.89:322,30,0	0/0:13,0:13:6.02:0,6,93	0/0:29,0:29:47.92:0,48,813	1/1:10,8:18:54.16:973,54,0	1/1:5,21:26:75.09:1321,75,0	0/0:23,0:23:66.18:0,66,1095	0/0:14,0:14:14.98:0,15,265	1/1:6,15:22:63.05:1081,63,0	0/0:19,0:19:33.07:0,33,535	1/1:1,22:23:68.84:956,69,0	0/0:26,0:25:54.17:0,54,924	0/0:18,0:18:39.12:0,39,660	0/0:28,0:28:81.26:0,81,1385	0/0:25,0:24:69.24:0,69,1188	1/1:5,2:6:15.05:290,15,0	1/1:4,6:11:32.90:402,33,0	1/1:5,8:13:29.51:286,30,0	0/0:13,0:13:15.05:0,15,263	0/0:12,0:12:18.06:0,18,282	0/0:27,0:27:45.13:0,45,790	0/0:26,0:26:42.14:0,42,721	1/1:8,15:22:10.44:1097,10,0	1/1:6,9:14:39:626,39,0	1/1:2,2:4:11.95:159,12,0
chr10	91088763	.	T	TATATG	8206.98	PASS	AB=0.610;AC=19;AF=0.339;AN=56;BaseQRankSum=12.978;DP=573;FS=9.489;HRun=0;HaplotypeScore=251.7813;InbreedingCoeff=0.8399;MQ=59.12;MQ0=4;MQRankSum=-13.298;QD=44.60;ReadPosRankSum=-2.905;VQSLOD=3.1642;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,3024	0/0:7,0:7:21.07:0,21,489	0/0:17,0:16:48.11:0,48,945	0/0:27,0:19:40.11:0,40,1030	0/0:6,10:14:2.37:0,2,8	0/0:13,0:13:5.99:0,6,103	0/0:31,0:31:50.99:0,51,1019	1/1:14,8:22:53.68:1473,54,0	1/1:11,21:31:63.07:1626,63,0	0/0:23,0:23:69.14:0,69,1432	0/0:14,0:14:14.81:0,15,349	1/1:5,15:20:38.47:1022,38,0	0/0:19,0:19:33.10:0,33,737	1/1:8,22:30:41.26:919,41,0	0/0:24,0:23:60.21:0,60,1332	0/0:18,0:18:37.66:0,38,795	0/0:27,0:27:78.25:0,78,1719	0/0:24,0:23:69.24:0,69,1552	1/1:9,2:10:20.74:448,21,0	1/1:6,6:12:5.99:60,6,0	1/1:9,8:15:7.20:179,7,0	0/0:14,0:14:15.02:0,15,327	0/0:13,0:13:18.03:0,18,348	0/0:28,0:28:44.27:0,44,974	0/0:26,0:26:42.13:0,42,909	0/1:9,15:23:10.90:1523,0,11	1/1:3,9:12:27.02:681,27,0	1/1:1,2:3:9.03:277,9,0
chr10	91088773	.	C	CG	3064.01	PASS	AB=0.536;AC=18;AF=0.346;AN=52;BaseQRankSum=9.157;DP=549;FS=19.061;HRun=1;HaplotypeScore=226.3758;InbreedingCoeff=0.8341;MQ=52.54;MQ0=2;MQRankSum=-10.955;QD=17.51;ReadPosRankSum=-2.989;VQSLOD=0.6729;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1554	0/0:9,0:9:24.08:0,24,309	0/0:13,0:11:7.03:0,7,210	0/0:24,0:13:13.03:0,13,292	./.	./.	0/0:34,0:34:36.04:0,36,464	1/1:1,18:19:54.14:777,54,0	1/1:2,27:29:24.93:395,25,0	0/0:22,0:22:59.28:0,59,780	0/0:17,0:17:15.05:0,15,195	1/1:1,20:21:22.54:246,23,0	0/0:22,0:22:30.88:0,31,377	1/1:2,29:31:14.62:124,15,0	0/0:26,0:26:75.24:0,75,968	0/0:18,0:18:29.08:0,29,406	0/0:27,0:27:78.17:0,78,945	0/0:22,0:21:63.16:0,63,797	1/1:1,11:12:36.09:500,36,0	0/1:1,10:11:0:0,0,0	0/1:3,14:17:12.50:52,0,13	0/0:13,0:13:12.04:0,12,156	0/0:10,0:10:6.02:0,6,78	0/0:25,0:25:36.11:0,36,464	0/0:23,0:23:33.11:0,33,428	1/1:4,17:21:18.73:736,19,0	1/1:3,8:11:20.38:294,20,0	1/1:0,3:3:9.03:134,9,0
chr10	91088780	.	G	GTGCATGCA	13200.36	PASS	AB=0.565;AC=42;AF=0.808;AN=52;BaseQRankSum=7.123;DP=618;FS=4.750;HRun=0;HaplotypeScore=258.0825;InbreedingCoeff=0.7493;MQ=44.85;MQ0=3;MQRankSum=-9.457;QD=27.97;ReadPosRankSum=-2.592;VQSLOD=3.9433;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:96.31:0,96,2257	0/0:12,0:12:30.08:0,30,670	1/1:12,0:8:1.71:4,2,0	./.	./.	0/1:1,13:14:0.03:0,0,0	1/1:24,20:44:37.95:909,38,0	1/1:31,0:31:72.20:1833,72,0	1/1:16,12:28:20.34:710,20,0	1/1:19,10:30:78.10:2387,78,0	1/1:5,11:16:6:75,6,0	1/1:10,12:22:14.71:568,15,0	1/1:14,10:25:23.82:652,24,0	1/1:23,14:37:13.74:414,14,0	0/0:28,0:28:57.08:0,57,1206	1/1:11,9:20:20.97:621,21,0	0/0:27,0:27:57.04:0,57,1238	1/1:14,7:20:44.97:1073,45,0	1/1:13,4:16:36.06:979,36,0	1/1:7,5:12:2.80:25,3,0	1/1:20,5:24:11.80:283,12,0	1/1:10,6:16:6:120,6,0	0/1:4,7:11:0:0,0,0	1/1:20,9:29:3.07:44,3,0	1/1:15,10:25:12.02:230,12,0	1/1:12,7:19:36.12:1220,36,0	1/1:6,4:10:20.96:531,21,0	1/1:6,2:8:24.04:521,24,0
chr10	91088848	.	A	ATGTG	10736.86	PASS	AB=0.700;AC=39;AF=0.696;AN=56;BaseQRankSum=1.014;DP=756;FS=5.077;HRun=0;HaplotypeScore=167.1118;InbreedingCoeff=0.2575;MQ=56.54;MQ0=13;MQRankSum=-1.427;QD=16.57;ReadPosRankSum=2.578;VQSLOD=4.5875;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:42:78.04:0,78,1586	0/0:14,0:15:39.13:0,39,627	0/1:48,0:25:22.88:23,0,318	0/1:55,0:27:27.34:27,0,133	1/1:9,21:33:44.89:1020,45,0	0/1:6,0:14:52.44:74,0,52	1/1:16,0:38:21.87:100,22,0	1/1:24,4:28:24.08:491,24,0	1/1:7,19:27:44.91:1085,45,0	0/1:11,1:30:35.17:311,0,35	1/1:5,0:19:35.61:160,36,0	1/1:7,6:17:20.27:332,20,0	0/1:8,0:25:4.01:143,0,4	1/1:10,15:25:21.42:519,21,0	0/0:30,0:32:69.21:0,69,1078	0/1:7,0:24:49.72:206,0,50	0/0:18,0:19:45.06:0,45,723	1/1:3,2:22:52.53:356,53,0	0/1:7,9:19:11.07:614,0,11	1/1:5,11:18:32.83:751,33,0	1/1:15,25:42:38.12:831,38,0	0/1:7,0:21:13.96:113,0,14	1/1:3,0:15:21.96:99,22,0	0/1:7,0:17:49.24:49,0,124	1/1:7,0:35:10.86:202,11,0	1/1:8,22:32:66.05:1454,66,0	1/1:5,16:25:50.77:1177,51,0	1/1:4,10:18:29.57:596,30,0
chr10	91089222	.	AGCACAC	A	2944.68	PASS	AB=0.948;AC=31;AF=0.554;AN=56;BaseQRankSum=4.229;DP=340;FS=3.968;HRun=0;HaplotypeScore=89.0749;InbreedingCoeff=0.3616;MQ=54.88;MQ0=10;MQRankSum=-6.164;QD=15.75;ReadPosRankSum=3.783;VQSLOD=2.4040;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:87.10:0,87,2276	0/0:9,0:8:21.50:0,22,492	1/1:7,0:3:6.52:23,7,0	0/1:15,0:5:2.62:3,0,5	0/1:12,0:12:2.03:2,0,94	1/1:4,2:8:20.92:337,21,0	0/1:2,16:19:14.81:66,0,15	0/0:26,0:24:5.44:0,5,432	0/1:15,0:14:52.75:53,0,122	1/1:4,3:7:18.01:298,18,0	1/1:7,1:8:18:197,18,0	0/1:5,0:5:14.13:14,0,41	1/1:3,3:8:21.02:367,21,0	0/1:8,0:8:32.44:32,0,53	0/0:13,0:13:39.13:0,39,1420	1/1:0,7:7:12.04:281,12,0	0/0:32,0:32:90.15:0,90,2349	1/1:10,6:15:41.44:592,41,0	0/0:10,0:8:23.86:0,24,188	0/1:8,0:8:13.67:14,0,42	0/0:20,0:20:41.77:0,42,344	1/1:3,0:4:8.98:138,9,0	1/1:0,4:4:0.47:1,0,0	1/1:9,1:11:26.74:229,27,0	1/1:6,3:10:21.03:372,21,0	0/0:12,1:13:15.82:0,16,232	0/1:7,0:6:9.01:61,0,9	0/1:7,0:6:46.74:57,0,47
chr10	91089223	.	GCACACACACACA	G	2269.20	PASS	AB=0.982;AC=22;AF=0.423;AN=52;BaseQRankSum=-2.025;DP=338;FS=35.334;HRun=0;HaplotypeScore=124.0234;InbreedingCoeff=0.5564;MQ=54.85;MQ0=10;MQRankSum=-3.042;QD=16.09;ReadPosRankSum=-0.097;VQSLOD=0.9680;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:63.22:0,63,3445	0/0:8,0:8:15.05:0,15,740	./.	./.	1/1:8,2:12:3.01:100,3,0	0/0:8,0:8:18.95:0,19,392	0/0:19,0:19:6.08:0,6,173	1/1:22,3:23:27.14:584,27,0	1/1:12,3:14:12.03:342,12,0	0/0:7,0:7:9.03:0,9,128	0/0:8,0:8:12.01:0,12,204	1/1:4,0:5:3.01:84,3,0	0/1:8,0:8:10.40:10,0,245	1/1:5,3:8:9.03:260,9,0	0/0:14,0:14:42.14:0,42,2427	0/0:7,0:7:12.04:0,12,188	0/0:30,0:32:75.24:0,75,3757	0/0:16,0:14:32.93:0,33,528	0/1:10,0:8:4:38,0,4	1/1:6,2:8:9:155,9,0	0/1:19,0:19:11.95:87,0,12	0/0:4,0:4:12.04:0,12,222	1/1:4,0:4:0.47:1,0,0	0/0:10,0:10:13.82:0,14,176	0/0:10,0:10:24.06:0,24,417	0/1:12,1:13:80.25:87,0,80	1/1:3,4:6:12.02:341,12,0	1/1:4,3:6:12.04:361,12,0
chr10	91089281	.	T	TA	3451.23	PASS	AB=0.786;AC=44;AF=0.786;AN=56;BaseQRankSum=0.148;DP=341;FS=0.540;HRun=11;HaplotypeScore=60.9646;InbreedingCoeff=0.6999;MQ=64.32;MQ0=0;MQRankSum=-3.832;QD=13.64;ReadPosRankSum=-2.870;VQSLOD=2.9687;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:62.69:0,63,484	0/0:3,0:3:5.97:0,6,46	0/1:12,0:7:8.84:9,0,44	0/0:10,0:9:11.13:0,11,75	1/1:2,18:19:9.83:281,10,0	1/1:2,1:14:22.88:120,23,0	1/1:0,0:5:14.31:76,14,0	1/1:8,10:18:33.45:307,33,0	1/1:2,9:11:21.04:213,21,0	1/1:6,0:14:24.24:127,24,0	1/1:0,0:8:14.27:74,14,0	0/1:3,8:12:2.36:145,0,2	1/1:1,0:6:3.31:15,3,0	1/1:1,13:14:27.05:274,27,0	0/0:17,0:17:32.84:0,33,254	1/1:0,0:5:11.36:57,11,0	0/0:30,0:33:71.79:0,72,528	1/1:5,0:13:22.73:115,23,0	1/1:4,10:15:32.28:303,32,0	1/1:1,10:12:29.89:288,30,0	1/1:1,6:7:14.99:141,15,0	1/1:0,0:4:11.48:63,11,0	1/1:2,0:9:8.52:43,9,0	1/1:0,0:4:2.84:14,3,0	1/1:1,1:12:19.89:101,20,0	1/1:4,6:11:17.87:167,18,0	1/1:3,12:15:27.05:274,27,0	1/1:4,8:12:24.05:244,24,0
chr10	91089368	.	C	CAAA	2828.86	PASS	AB=0.917;AC=23;AF=0.411;AN=56;BaseQRankSum=0.421;DP=356;FS=5.897;HRun=10;HaplotypeScore=85.8592;InbreedingCoeff=0.8829;MQ=43.87;MQ0=13;MQRankSum=-6.005;QD=18.86;ReadPosRankSum=-4.216;VQSLOD=0.9957;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:38.75:0,39,470	0/0:7,0:7:14.95:0,15,169	0/0:9,0:2:6.01:0,6,63	0/1:10,0:3:0:1,0,0	1/1:12,6:22:40.94:488,41,0	0/0:18,0:18:17.86:0,18,219	0/0:10,0:10:14.98:0,15,183	1/1:10,3:13:26.88:298,27,0	1/1:5,4:9:15.02:232,15,0	0/0:14,0:14:21.51:0,22,256	0/0:8,0:8:12.02:0,12,140	1/1:4,3:8:13.75:184,14,0	0/0:6,0:6:8.88:0,9,174	1/1:6,2:7:9.03:168,9,0	0/0:13,0:12:14.87:0,15,181	0/0:8,0:8:14.73:0,15,182	0/0:29,0:29:59.92:0,60,690	0/0:13,0:12:27.03:0,27,319	1/1:10,2:10:21:267,21,0	1/1:7,4:12:17.97:200,18,0	1/1:5,5:10:18.02:247,18,0	0/0:9,0:9:20.86:0,21,254	0/0:12,0:12:27.07:0,27,328	0/0:11,0:12:17.73:0,18,185	0/0:14,0:14:17.74:0,18,216	1/1:12,7:21:3.76:566,4,0	1/1:7,3:9:13.86:235,14,0	1/1:10,1:9:9.03:154,9,0
chr10	91089397	.	AC	A	4139.86	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=6.115;DP=353;FS=25.017;HRun=1;HaplotypeScore=61.5770;InbreedingCoeff=0.9238;MQ=56.44;MQ0=8;MQRankSum=-6.232;QD=18.16;ReadPosRankSum=-4.589;VQSLOD=1.5539;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:26:40.45:0,40,558	0/0:10,0:10:17.52:0,18,220	0/0:22,0:8:19.38:0,19,148	0/0:20,0:9:20.17:0,20,155	1/1:5,11:16:47.79:378,48,0	1/1:0,15:15:18.01:166,18,0	1/1:5,3:8:23.90:197,24,0	1/1:7,5:12:29.20:243,29,0	1/1:5,3:8:23.87:183,24,0	1/1:0,16:16:32.84:260,33,0	1/1:6,4:10:23.76:175,24,0	1/1:1,2:3:8.95:69,9,0	1/1:8,2:10:26.66:207,27,0	1/1:5,0:5:10.58:83,11,0	0/0:12,0:12:20.50:0,20,215	1/1:2,2:4:11.96:102,12,0	0/0:34,0:33:61.02:0,61,685	1/1:7,5:11:26.91:223,27,0	1/1:8,4:10:16.91:219,17,0	1/1:6,4:10:26.91:220,27,0	1/1:6,3:9:12.74:86,13,0	1/1:7,1:8:17.84:132,18,0	1/1:4,4:8:11.87:82,12,0	1/1:12,8:19:29.59:240,30,0	1/1:12,4:16:41.74:325,42,0	1/1:0,18:18:48.76:394,49,0	1/1:4,1:4:11.96:101,12,0	1/1:2,1:3:6:53,6,0
chr10	91089399	.	AAAAC	A	2637.44	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=7.728;DP=358;FS=5.537;HRun=0;HaplotypeScore=82.5320;InbreedingCoeff=0.3294;MQ=57.94;MQ0=7;MQRankSum=-3.697;QD=11.27;ReadPosRankSum=0.781;VQSLOD=2.0452;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:66.23:0,66,1764	0/0:10,0:10:30.03:0,30,700	0/0:22,0:9:6.81:0,7,414	0/0:19,0:9:23.95:0,24,421	1/1:15,2:17:37.36:413,37,0	1/1:16,0:16:10.70:120,11,0	1/1:9,0:9:14.73:109,15,0	1/1:13,0:13:26.42:244,26,0	1/1:8,1:9:21.21:186,21,0	0/1:17,0:17:22.93:81,0,23	1/1:11,0:11:1.84:103,2,0	1/1:4,0:4:2.80:50,3,0	0/1:11,0:11:8.30:67,0,8	0/1:5,0:5:4.21:31,0,4	0/0:12,0:12:32.99:0,33,707	0/1:7,0:7:12.81:17,0,13	0/0:33,0:32:90.19:0,90,2281	0/1:11,0:10:0.24:85,0,0	1/1:12,0:10:6.27:237,6,0	1/1:10,0:10:20.65:233,21,0	1/1:9,0:9:5.58:43,6,0	0/1:7,0:7:27.70:28,0,46	0/1:6,0:6:30.63:36,0,31	1/1:18,0:17:12.77:136,13,0	1/1:15,1:16:10.95:113,11,0	1/1:17,1:18:31.51:398,32,0	0/1:5,0:4:8.50:34,0,8	1/1:3,0:3:6:56,6,0
chr10	91089400	.	AAAC	A	3092.75	PASS	AB=0.917;AC=42;AF=0.750;AN=56;BaseQRankSum=8.460;DP=335;FS=2.371;HRun=0;HaplotypeScore=70.6151;InbreedingCoeff=0.7262;MQ=61.21;MQ0=5;MQRankSum=-4.431;QD=14.73;ReadPosRankSum=0.401;VQSLOD=3.4055;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:69.19:0,69,1519	0/0:11,0:11:30.07:0,30,645	0/0:22,0:9:20.75:0,21,376	0/0:19,0:10:23.44:0,23,382	1/1:11,4:16:38.75:354,39,0	1/1:13,2:15:17.10:176,17,0	1/1:6,0:6:15.02:172,15,0	1/1:11,2:13:26.46:228,26,0	1/1:7,2:9:21.27:169,21,0	1/1:16,0:16:15.68:163,16,0	1/1:9,1:10:18.54:145,19,0	1/1:4,1:5:10.39:75,10,0	1/1:10,0:10:16.91:153,17,0	0/1:3,0:3:6.22:32,0,6	0/0:12,0:12:32.98:0,33,639	1/1:6,0:6:7.18:53,7,0	0/0:33,0:32:90.09:0,90,1935	1/1:11,0:10:17.52:205,18,0	1/1:7,3:8:20.98:198,21,0	1/1:5,3:8:20.95:181,21,0	1/1:6,2:9:8.09:63,8,0	1/1:4,0:4:6.40:69,6,0	0/1:4,1:5:13.04:21,0,13	1/1:16,1:16:16.94:193,17,0	1/1:12,0:12:19.17:216,19,0	1/1:14,4:18:35.08:318,35,0	1/1:4,0:3:3.89:39,4,0	1/1:3,0:3:6.01:61,6,0
chr10	91089401	.	AAC	A	3045.71	PASS	AB=0.875;AC=42;AF=0.750;AN=56;BaseQRankSum=7.440;DP=322;FS=1.707;HRun=0;HaplotypeScore=63.9709;InbreedingCoeff=0.7213;MQ=62.47;MQ0=5;MQRankSum=-4.330;QD=15.31;ReadPosRankSum=-1.725;VQSLOD=3.1057;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:69.21:0,69,1282	0/0:11,0:11:27.08:0,27,511	0/0:22,0:9:0.05:0,0,323	0/0:19,0:10:19.64:0,20,307	1/1:14,2:17:42.72:369,43,0	1/1:8,2:10:17.60:175,18,0	1/1:3,3:6:16.21:124,16,0	1/1:12,1:13:27.79:227,28,0	1/1:10,0:10:24.33:191,24,0	1/1:13,1:14:17.81:158,18,0	1/1:7,1:9:20.19:124,20,0	1/1:4,1:5:5.10:62,5,0	1/1:10,1:11:25.02:207,25,0	0/1:3,0:3:0.09:34,0,0	0/0:12,0:12:24.08:0,24,486	1/1:4,1:5:9.18:69,9,0	0/0:32,0:31:81.20:0,81,1558	1/1:6,4:9:17.77:137,18,0	1/1:10,1:9:23.95:206,24,0	1/1:8,1:9:23.96:209,24,0	1/1:10,0:10:11.42:90,11,0	0/1:2,1:3:3.59:42,0,4	1/1:4,1:5:2.93:26,3,0	1/1:8,6:13:16.63:161,17,0	1/1:10,2:12:20.21:175,20,0	1/1:12,2:15:35.91:321,36,0	1/1:3,1:3:8.78:58,9,0	1/1:3,0:3:6.01:57,6,0
chr10	91089402	.	AC	A	3215.28	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=7.045;DP=317;FS=3.117;HRun=2;HaplotypeScore=59.0080;InbreedingCoeff=0.8313;MQ=64.93;MQ0=5;MQRankSum=-4.379;QD=16.16;ReadPosRankSum=-2.600;VQSLOD=2.8846;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:66.17:0,66,919	0/0:11,0:11:30.06:0,30,405	0/0:19,1:9:6.58:0,7,236	0/0:17,0:11:20.71:0,21,265	1/1:16,1:17:44.72:343,45,0	1/1:8,2:10:20.90:164,21,0	1/1:7,0:7:17.98:150,18,0	1/1:13,0:13:29.98:258,30,0	1/1:10,0:10:25.08:184,25,0	1/1:11,2:14:23.92:193,24,0	1/1:8,0:9:23.74:172,24,0	1/1:5,0:5:11.84:85,12,0	1/1:10,1:11:26.91:218,27,0	1/1:5,0:5:12.83:94,13,0	0/0:12,0:12:30.07:0,30,409	1/1:4,1:5:11.79:83,12,0	0/0:30,0:29:75.25:0,75,1118	1/1:7,1:7:17.92:140,18,0	1/1:9,0:8:23.93:193,24,0	1/1:8,0:9:23.94:194,24,0	1/1:9,0:10:11.90:90,12,0	0/1:3,0:3:1.22:42,0,1	1/1:4,1:5:2.98:22,3,0	1/1:14,0:14:25.74:200,26,0	1/1:11,1:12:20.96:172,21,0	1/1:15,0:15:35.84:277,36,0	1/1:4,0:3:8.96:77,9,0	1/1:2,1:3:5.98:47,6,0
chr10	91089703	.	CG	C	23000.57	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=14.292;DP=908;FS=0.604;HRun=2;HaplotypeScore=110.9123;InbreedingCoeff=0.9997;MQ=83.78;MQ0=0;MQRankSum=-6.812;QD=33.48;ReadPosRankSum=3.587;VQSLOD=4.6055;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,165,2254	0/0:14,0:14:42.05:0,42,553	0/0:28,0:28:74.27:0,74,1055	0/0:29,0:29:69.18:0,69,960	1/1:0,22:22:54.12:674,54,0	1/1:0,28:28:75.24:969,75,0	1/1:1,31:32:78.25:1004,78,0	1/1:1,35:36:99:1245,105,0	1/1:3,37:40:99:1483,120,0	1/1:1,46:47:99:1752,138,0	1/1:0,18:18:45.14:576,45,0	1/1:0,36:36:99:1360,105,0	1/1:0,24:24:69.22:892,69,0	1/1:1,32:33:87.26:1110,87,0	0/0:49,0:48:99:0,147,2066	1/1:0,40:40:99:1415,111,0	0/0:43,0:43:99:0,126,1700	1/1:0,22:22:51.17:660,51,0	1/1:1,25:26:72.12:851,72,0	1/1:0,22:22:62.91:747,63,0	1/1:1,60:61:99:1882,147,0	1/1:0,26:26:57.08:715,57,0	1/1:0,30:30:69.22:889,69,0	1/1:0,59:59:99:1903,147,0	1/1:0,14:14:33.11:425,33,0	1/1:0,38:38:99:1324,111,0	1/1:0,23:23:60.20:776,60,0	1/1:0,10:10:27.09:349,27,0
chr10	91089763	.	TAC	T	656.98	PASS	AB=0.962;AC=4;AF=0.071;AN=56;BaseQRankSum=6.660;DP=1112;FS=2.554;HRun=0;HaplotypeScore=223.3135;InbreedingCoeff=0.5262;MQ=55.67;MQ0=12;MQRankSum=0.649;QD=6.70;ReadPosRankSum=-0.656;VQSLOD=3.2109;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:74,0:74:99:0,193,3093	0/0:19,0:19:54.14:0,54,811	0/0:57,0:22:42.09:0,42,644	0/0:58,0:31:58.39:0,58,845	0/0:27,0:27:63.18:0,63,954	0/0:33,0:33:54.41:0,54,1181	0/0:35,0:35:68.15:0,68,1144	0/0:33,0:33:72.65:0,73,1091	1/1:53,0:54:58.60:673,59,0	0/0:38,1:39:49.51:0,50,1271	0/0:23,0:23:36.09:0,36,536	0/0:41,0:41:81.22:0,81,1234	0/0:30,0:30:78.24:0,78,1226	0/0:50,0:50:99:0,119,1836	0/0:49,0:49:99:0,117,1853	0/1:33,3:36:89.66:90,0,977	0/0:49,0:49:79.60:0,80,1800	0/0:28,0:28:69.18:0,69,1080	0/0:25,0:23:14.46:0,14,632	0/0:26,0:26:39.13:0,39,620	0/0:106,0:106:99:0,192,3512	0/0:28,0:28:60.20:0,60,988	0/0:29,0:29:36.12:0,36,594	0/0:69,1:70:99:0,112,2392	0/0:19,0:19:18.06:0,18,298	0/0:40,0:40:80.33:0,80,1551	0/0:25,0:24:57.15:0,57,902	0/1:8,0:8:0.74:1,0,247
chr10	91089776	.	ACG	A	3193.10	PASS	AB=0.985;AC=12;AF=0.214;AN=56;BaseQRankSum=3.742;DP=1148;FS=0.000;HRun=0;HaplotypeScore=212.9203;InbreedingCoeff=-0.0692;MQ=55.82;MQ0=15;MQRankSum=2.606;QD=6.57;ReadPosRankSum=-10.572;VQSLOD=0.1081;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:77,0:77:99:0,220,3797	0/0:20,0:20:51.12:0,51,907	0/0:59,0:24:61.80:0,62,937	0/0:56,1:29:52.34:0,52,891	0/0:28,0:28:0.41:0,0,381	0/0:31,0:31:84.23:0,84,1520	0/0:35,0:35:69.22:0,69,1480	0/1:39,0:39:99:291,0,337	1/1:19,36:55:99:1750,129,0	0/0:33,0:33:65.69:0,66,1442	0/0:19,0:19:33.08:0,33,596	0/1:39,0:39:99:124,0,474	0/0:31,0:31:84.22:0,84,1493	0/1:49,0:49:12.58:13,0,786	0/0:45,0:45:99:0,132,2267	0/1:36,0:36:24.06:24,0,1133	0/0:44,1:45:99:0,116,2154	0/0:29,0:29:71.95:0,72,1263	0/1:31,2:31:99:293,0,184	0/1:26,0:26:5.61:6,0,264	0/1:117,2:120:99:385,0,1392	0/0:31,0:31:72.13:0,72,1184	0/0:26,0:26:50.98:0,51,766	0/0:74,0:74:99:0,163,3024	0/0:21,0:21:26.88:0,27,385	0/1:43,1:44:99:182,0,584	0/1:27,0:26:49.50:49,0,377	0/1:17,1:18:80.23:231,0,80
chr10	91091100	.	A	AACACACAC	11128.12	PASS	AB=0.639;AC=43;AF=0.768;AN=56;BaseQRankSum=-2.510;DP=466;FS=12.099;HRun=0;HaplotypeScore=128.5955;InbreedingCoeff=0.6958;MQ=49.65;MQ0=6;MQRankSum=-8.749;QD=35.67;ReadPosRankSum=-4.665;VQSLOD=2.9505;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:61.71:0,62,1582	0/0:7,0:7:12.04:0,12,307	0/0:36,0:19:3.04:0,3,260	0/0:28,0:19:5.53:0,6,153	1/1:8,3:14:6.01:148,6,0	1/1:9,3:12:12.04:449,12,0	1/1:10,1:13:9.03:313,9,0	1/1:21,0:20:15.05:398,15,0	1/1:12,5:21:18.06:655,18,0	1/1:10,9:20:45.14:1491,45,0	1/1:2,3:6:9.03:347,9,0	1/1:8,0:10:6.02:173,6,0	1/1:3,2:8:9.03:369,9,0	1/1:3,4:9:12.04:487,12,0	0/0:12,0:12:27.09:0,27,660	1/1:7,4:13:21.07:786,21,0	0/0:28,0:30:57.20:0,57,1375	1/1:9,4:13:13:519,13,0	1/1:9,0:11:21.05:443,21,0	1/1:6,5:14:15.05:620,15,0	1/1:22,1:23:4.37:121,4,0	1/1:2,2:7:9.03:320,9,0	1/1:7,5:12:12.04:489,12,0	0/1:10,9:23:5.92:362,0,6	1/1:7,8:18:24.08:874,24,0	1/1:16,0:15:18.06:609,18,0	1/1:10,5:21:34:1050,34,0	1/1:3,0:3:3.01:104,3,0
chr10	91091203	.	T	TG	4479.08	PASS	AB=0.991;AC=24;AF=0.429;AN=56;BaseQRankSum=4.169;DP=402;FS=11.858;HRun=4;HaplotypeScore=79.8820;InbreedingCoeff=0.7661;MQ=71.28;MQ0=8;MQRankSum=-3.403;QD=19.82;ReadPosRankSum=3.550;VQSLOD=3.4864;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:47.96:0,48,473	0/0:7,0:7:15.03:0,15,160	0/0:50,0:16:38.71:0,39,309	0/1:53,0:24:8.34:8,0,155	1/1:3,25:28:55.67:620,56,0	0/0:6,0:5:7.04:0,7,38	0/0:4,0:4:8.92:0,9,65	1/1:3,22:23:63.78:618,64,0	1/1:0,9:9:21.07:274,21,0	0/0:14,0:14:21.66:0,22,154	0/0:9,0:9:14.42:0,14,82	1/1:1,6:7:15.05:190,15,0	0/0:6,0:6:7.78:0,8,51	1/1:0,6:6:15.05:193,15,0	0/0:8,0:8:23.97:0,24,235	0/0:6,0:6:7.96:0,8,45	0/0:15,0:15:30:0,30,310	0/0:5,0:5:10.22:0,10,64	1/1:1,11:11:33.09:406,33,0	1/1:5,16:21:56.34:627,56,0	1/1:4,1:5:6.01:63,6,0	0/0:6,0:6:3:0,3,27	0/0:5,0:5:1.55:0,2,4	0/1:7,0:6:1.35:1,0,34	0/0:14,0:14:8.16:0,8,49	1/1:1,15:16:36.59:466,37,0	1/1:3,16:19:47.02:518,47,0	1/1:4,12:16:42.02:494,42,0
chr10	91091207	.	G	GTTTTTTT	3757.23	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-3.820;DP=450;FS=2.742;HRun=10;HaplotypeScore=137.8862;InbreedingCoeff=0.8189;MQ=65.94;MQ0=11;MQRankSum=-2.552;QD=35.11;ReadPosRankSum=-4.911;VQSLOD=0.2449;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:20:32.94:0,33,654	0/0:8,0:8:17.89:0,18,355	0/0:57,0:17:0.87:0,1,217	0/0:65,0:24:24.81:0,25,387	0/0:26,0:26:48.23:0,48,599	1/1:2,4:6:9.03:298,9,0	1/1:3,0:3:3.01:59,3,0	0/0:27,0:25:47.31:0,47,726	0/0:9,0:9:21.06:0,21,251	1/1:14,7:22:45.15:1069,45,0	1/1:5,6:11:21.07:511,21,0	0/0:6,0:6:15.04:0,15,166	1/1:4,4:8:9.03:269,9,0	0/0:6,0:6:15.04:0,15,185	0/0:7,0:8:17.95:0,18,325	1/1:4,0:7:8.99:195,9,0	0/0:17,0:17:29.78:0,30,545	1/1:6,0:6:15.02:284,15,0	0/0:12,0:11:29.64:0,30,370	0/0:21,0:21:59.52:0,60,741	0/0:6,0:5:2.68:0,3,32	1/1:3,4:6:3.01:109,3,0	1/1:8,0:8:9.03:276,9,0	1/1:3,0:3:2.99:59,3,0	1/1:12,11:24:24.08:625,24,0	0/0:15,0:15:39.11:0,39,471	0/0:18,0:18:48.14:0,48,615	0/0:16,0:16:39.06:0,39,512
chr10	91091217	.	TGTGG	T	150.75	PASS	AB=0.946;AC=8;AF=0.143;AN=56;BaseQRankSum=-2.211;DP=492;FS=6.849;HRun=0;HaplotypeScore=116.2987;InbreedingCoeff=0.0922;MQ=55.68;MQ0=23;MQRankSum=-2.317;QD=2.22;ReadPosRankSum=-1.448;VQSLOD=1.6898;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,2:21:25.36:25,0,793	0/1:8,1:9:40.88:41,0,399	0/0:81,0:17:36.65:0,37,440	0/0:89,0:30:48.59:0,49,875	0/0:28,0:28:22.12:0,22,664	0/0:6,0:4:1:0,1,56	1/1:3,0:2:5.81:53,6,0	0/0:25,0:20:57.62:0,58,786	0/0:8,0:7:20.96:0,21,231	0/1:18,0:17:18.23:18,0,442	0/0:10,0:7:0.67:0,1,64	0/0:8,0:8:17.14:0,17,116	0/0:7,0:7:4.59:0,5,111	0/0:5,0:5:14.96:0,15,149	0/0:6,1:7:9.27:0,9,375	0/1:5,1:6:0.48:0,0,55	0/0:19,0:19:16.61:0,17,777	0/1:6,0:6:6.13:119,0,6	0/0:13,0:11:30.07:0,30,403	0/0:21,0:21:55.07:0,55,698	0/0:5,0:4:5.96:0,6,44	0/0:8,0:7:6.02:0,6,138	0/0:9,0:9:9.02:0,9,94	0/1:4,0:2:6.19:19,0,6	0/0:21,0:20:23.14:0,23,348	0/0:18,0:18:44.60:0,45,549	0/0:20,0:19:47.16:0,47,528	0/0:14,0:15:40.61:0,41,509
chr10	91091226	.	TG	T	2217.31	PASS	AB=0.941;AC=27;AF=0.482;AN=56;BaseQRankSum=5.595;DP=496;FS=15.148;HRun=2;HaplotypeScore=86.7213;InbreedingCoeff=0.5305;MQ=48.06;MQ0=55;MQRankSum=-2.358;QD=8.15;ReadPosRankSum=0.108;VQSLOD=-0.2760;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:14.58:0,15,219	0/1:8,0:9:16.78:17,0,88	0/1:77,1:15:28.11:28,0,55	0/0:85,0:28:13.02:0,13,210	1/1:15,8:23:60.19:431,60,0	0/0:7,0:4:6.56:0,7,40	1/1:5,0:1:2.97:20,3,0	1/1:21,0:18:16.44:282,16,0	1/1:7,1:8:17.74:121,18,0	0/0:20,0:19:4.16:0,4,151	0/0:12,1:9:0.08:0,0,60	0/1:7,1:8:2.08:91,0,2	0/0:6,0:5:8.77:0,9,50	1/1:4,0:4:11.92:88,12,0	0/0:7,0:6:10.91:0,11,104	0/0:7,0:6:8.82:0,9,55	0/0:19,0:17:14.74:0,15,239	0/1:6,0:4:3.63:5,0,4	1/1:12,1:9:17.88:132,18,0	1/1:17,3:19:50.54:376,51,0	1/1:4,2:5:5.98:53,6,0	0/0:8,0:6:8.84:0,9,63	0/1:10,0:8:5.09:5,0,27	0/0:10,0:5:2.19:0,2,8	0/0:16,0:14:7.35:0,7,107	1/1:22,2:20:44.97:309,45,0	1/1:14,0:14:32.52:216,33,0	1/1:13,1:11:29.79:233,30,0
chr10	91091227	.	GGT	G	2001.94	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=6.028;DP=500;FS=10.951;HRun=0;HaplotypeScore=89.1859;InbreedingCoeff=0.4868;MQ=46.38;MQ0=60;MQRankSum=-2.291;QD=6.67;ReadPosRankSum=0.726;VQSLOD=2.4433;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:18.11:0,18,275	0/1:10,0:9:11.63:12,0,102	0/1:77,0:15:27.71:28,0,65	0/0:83,0:26:13.47:0,13,210	1/1:24,1:23:57.95:384,58,0	0/1:7,0:4:0.03:0,0,26	1/1:5,0:1:1.25:3,1,0	1/1:24,0:18:9.07:245,9,0	1/1:7,1:7:16.12:109,16,0	0/1:21,0:19:4.42:4,0,185	0/0:15,0:10:0.93:0,1,74	0/1:9,0:8:2.13:79,0,2	0/0:6,0:5:8.87:0,9,62	1/1:4,0:4:11.92:88,12,0	0/0:7,0:6:12.85:0,13,122	0/0:6,0:6:8.82:0,9,55	0/0:22,0:19:32.11:0,32,307	0/1:7,0:5:4.17:7,0,4	1/1:11,0:7:17.65:123,18,0	1/1:19,1:19:49.94:356,50,0	1/1:5,1:5:5.96:45,6,0	0/0:8,0:6:8.93:0,9,77	0/1:10,0:8:4.29:4,0,27	0/0:10,0:5:2.76:0,3,17	0/0:17,0:14:12.74:0,13,121	1/1:23,1:20:42.88:279,43,0	1/1:16,0:14:31.83:213,32,0	1/1:15,0:11:28.89:209,29,0
chr10	91091911	.	TA	T	5017.87	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=11.853;DP=602;FS=2.937;HRun=9;HaplotypeScore=65.1343;InbreedingCoeff=0.9965;MQ=72.21;MQ0=1;MQRankSum=-0.160;QD=21.44;ReadPosRankSum=2.863;VQSLOD=5.8223;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,153,1711	0/0:7,0:7:15.04:0,15,173	0/0:19,0:19:27.01:0,27,257	0/0:21,0:16:29.57:0,30,319	0/0:23,0:23:63.16:0,63,706	1/1:0,19:19:48.03:439,48,0	1/1:2,20:22:54.03:494,54,0	0/0:26,0:26:72.20:0,72,815	0/0:16,0:16:42.11:0,42,474	1/1:1,26:27:81:729,81,0	1/1:1,28:29:75.03:686,75,0	0/0:10,0:10:24.07:0,24,277	1/1:1,21:22:57.03:522,57,0	0/0:18,0:18:39.10:0,39,439	0/0:30,0:30:72.21:0,72,831	1/1:3,14:17:36.02:330,36,0	0/0:30,0:31:78.06:0,78,877	1/1:4,18:22:45.01:412,45,0	0/0:19,0:20:53.97:0,54,586	0/0:21,0:21:57.13:0,57,643	0/0:17,0:17:42.11:0,42,473	1/1:3,15:18:23.96:220,24,0	1/1:3,13:16:36.02:329,36,0	1/1:2,19:21:54.02:494,54,0	1/1:2,18:21:41.05:363,41,0	0/0:17,0:17:45.13:0,45,519	0/0:28,0:28:54.12:0,54,608	0/0:9,0:9:24.06:0,24,267
chr10	91093402	.	ACTGT	A	8885.12	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.861;DP=589;FS=2.956;HRun=0;HaplotypeScore=101.1877;InbreedingCoeff=0.9995;MQ=82.27;MQ0=0;MQRankSum=-6.341;QD=43.34;ReadPosRankSum=4.913;VQSLOD=5.3943;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.26:0,93,2335	0/0:12,0:12:33.10:0,33,834	0/0:34,0:34:80.64:0,81,1994	0/0:29,0:28:75.13:0,75,1583	0/0:26,0:26:72.19:0,72,1718	1/1:2,27:29:72.14:1320,72,0	1/1:2,21:23:48.16:908,48,0	0/0:31,0:31:78.21:0,78,1649	0/0:13,0:13:36.12:0,36,966	1/1:0,16:16:48.01:831,48,0	1/1:1,14:15:27.09:487,27,0	0/0:17,0:17:51.13:0,51,1202	1/1:0,12:12:33.11:603,33,0	0/0:15,0:15:45.15:0,45,1213	0/0:29,0:29:87.28:0,87,2232	1/1:1,16:17:36.12:684,36,0	0/0:32,0:32:87.27:0,87,2130	1/1:1,23:24:57.20:1082,57,0	0/0:30,0:30:89.60:0,90,2128	0/0:21,0:21:63.19:0,63,1579	0/0:18,0:18:48.12:0,48,1168	1/1:1,20:21:54.13:982,54,0	1/1:1,16:17:39.13:737,39,0	1/1:3,17:20:39.13:740,39,0	1/1:0,11:11:27.09:510,27,0	0/0:13,1:13:39.13:0,39,998	0/0:21,0:21:63.15:0,63,1516	0/0:10,0:10:30.08:0,30,718
chr10	91093972	.	G	GCC	2651.06	PASS	AB=0.769;AC=20;AF=0.357;AN=56;BaseQRankSum=-3.659;DP=576;FS=2.763;HRun=9;HaplotypeScore=78.3697;InbreedingCoeff=0.8340;MQ=77.15;MQ0=2;MQRankSum=-0.555;QD=14.89;ReadPosRankSum=-1.203;VQSLOD=1.6201;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:96.20:0,96,1010	0/0:12,0:12:33.08:0,33,351	0/0:26,0:27:41.48:0,41,371	0/0:15,0:14:26.31:0,26,207	0/0:21,0:21:54.13:0,54,575	1/1:3,7:12:11.52:125,12,0	1/1:7,13:22:40.70:534,41,0	0/0:24,0:24:36.03:0,36,383	0/0:34,0:34:87.21:0,87,926	1/1:8,9:19:33.64:434,34,0	1/1:5,3:10:5.38:55,5,0	0/0:19,0:19:39.07:0,39,415	1/1:12,3:16:32.53:398,33,0	0/0:15,0:15:42.09:0,42,439	0/0:25,0:25:66.12:0,66,688	0/1:3,17:21:30.76:383,0,31	0/0:28,0:28:71.87:0,72,756	1/1:2,5:9:5.50:37,6,0	0/0:17,0:18:33.01:0,33,406	0/0:23,0:23:31.90:0,32,549	0/0:39,0:39:96.16:0,96,1005	1/1:7,9:17:8.52:101,9,0	0/1:4,0:4:0:0,0,0	1/1:6,22:31:52.60:692,53,0	1/1:7,3:16:8.52:93,9,0	0/0:29,0:30:80.85:0,81,833	0/0:19,0:19:42.09:0,42,447	0/0:12,0:12:30.05:0,30,319
chr10	91094242	.	TTCTCTCTCTCTCTC	T	1754.57	PASS	AC=18;AF=0.391;AN=46;BaseQRankSum=3.514;DP=525;FS=3.416;HRun=0;HaplotypeScore=161.7752;InbreedingCoeff=0.7118;MQ=59.33;MQ0=27;MQRankSum=-4.205;QD=11.04;ReadPosRankSum=-2.309;VQSLOD=2.3188;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:15.03:0,15,323	./.	./.	0/0:74,0:29:0:0,0,0	0/0:10,0:10:6.02:0,6,100	1/1:21,1:19:9.02:226,9,0	1/1:17,1:15:9.50:241,10,0	0/0:18,0:17:9.02:0,9,140	0/0:16,0:16:12.51:0,13,220	./.	./.	0/0:17,0:17:12.98:0,13,319	1/1:11,7:17:9.03:350,9,0	0/0:14,0:17:21.07:0,21,490	0/0:14,0:16:21.07:0,21,507	1/1:9,10:17:14.67:583,15,0	0/0:19,0:20:18.06:0,18,490	1/1:25,7:29:2.97:84,3,0	./.	0/0:8,0:8:3.01:0,3,48	0/0:27,0:25:18.06:0,18,470	1/1:14,3:16:2.96:20,3,0	1/1:3,1:4:3.01:85,3,0	1/1:23,0:22:8.79:129,9,0	1/1:3,2:5:6.02:200,6,0	0/0:21,0:21:20.55:0,21,355	0/0:11,0:11:7.84:0,8,127	0/0:9,0:10:6.02:0,6,206
chr10	91096219	.	TCACACA	T	866.11	PASS	AB=0.831;AC=23;AF=0.500;AN=46;BaseQRankSum=3.742;DP=342;FS=11.814;HRun=0;HaplotypeScore=74.2106;InbreedingCoeff=0.1922;MQ=69.68;MQ0=4;MQRankSum=-3.845;QD=5.74;ReadPosRankSum=-0.067;VQSLOD=0.7097;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:25:3.87:25,4,0	0/0:1,0:1:3.01:0,3,46	./.	./.	./.	0/1:11,0:12:29.85:30,0,99	0/0:12,0:12:8.28:0,8,181	1/1:16,0:14:1.39:18,1,0	1/1:7,3:9:6.02:98,6,0	./.	0/1:5,1:8:19.02:19,0,78	0/1:12,3:15:10.34:169,0,10	./.	1/1:4,1:5:3.01:60,3,0	0/1:7,2:10:45.23:45,0,148	0/1:8,1:9:48.27:48,0,270	0/0:15,0:25:10.07:0,10,177	0/0:13,0:18:15.02:0,15,163	1/1:5,2:8:3.01:60,3,0	1/1:3,1:4:3.01:60,3,0	0/0:23,0:23:0.06:0,0,44	0/0:2,0:3:3.01:0,3,38	0/0:3,0:5:3.01:0,3,38	0/0:17,0:23:25.20:0,25,362	0/0:12,0:13:8.14:0,8,122	1/1:7,0:8:3.01:42,3,0	1/1:6,1:8:6.02:102,6,0	1/1:9,4:13:12.04:234,12,0
chr10	91096374	.	ATAT	A	2884.05	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=8.478;DP=224;FS=11.184;HRun=0;HaplotypeScore=35.3334;InbreedingCoeff=0.8077;MQ=76.68;MQ0=0;MQRankSum=-2.109;QD=32.05;ReadPosRankSum=-1.878;VQSLOD=1.8691;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:18.06:0,18,379	0/0:3,0:3:9.03:0,9,175	0/0:6,0:4:9.03:0,9,186	0/0:17,0:15:8.93:0,9,140	1/1:4,8:12:24.08:361,24,0	0/0:13,0:13:33.11:0,33,681	0/0:2,0:2:6.02:0,6,126	1/1:6,19:24:54.18:801,54,0	1/1:0,5:5:12.04:171,12,0	0/0:3,0:3:6.02:0,6,119	0/0:7,0:7:21.07:0,21,417	1/1:0,7:7:18.06:271,18,0	0/0:4,0:4:12.04:0,12,253	1/1:1,1:2:3.01:45,3,0	0/0:1,0:1:3.01:0,3,61	0/0:2,0:2:6.02:0,6,126	0/0:17,0:17:42.14:0,42,885	0/0:22,0:22:51.18:0,51,1073	1/1:1,7:8:21.07:307,21,0	1/1:0,3:3:9.03:125,9,0	1/1:0,5:5:9.03:135,9,0	0/0:1,0:1:3.01:0,3,63	0/0:4,0:4:12.04:0,12,242	0/0:2,0:2:6.02:0,6,126	0/0:23,0:23:69.23:0,69,1404	1/1:0,6:6:18.04:241,18,0	1/1:0,7:7:21.07:316,21,0	1/1:3,7:10:21.07:316,21,0
chr10	91097762	.	T	TCA	6790.44	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=-4.526;DP=662;FS=1.714;HRun=0;HaplotypeScore=121.2394;InbreedingCoeff=0.7791;MQ=62.24;MQ0=4;MQRankSum=-0.444;QD=20.09;ReadPosRankSum=0.112;VQSLOD=4.6944;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:96.04:0,96,1145	0/0:11,0:11:27.09:0,27,343	0/1:36,0:20:13.28:13,0,147	0/1:24,0:15:2.95:3,0,153	1/1:3,16:19:30.10:502,30,0	0/1:18,0:18:6.12:6,0,157	0/0:25,0:25:18.07:0,18,301	1/1:6,14:20:45.12:687,45,0	1/1:3,19:22:23.11:356,23,0	0/0:23,0:23:57.14:0,57,718	0/0:17,0:17:26.93:0,27,331	1/1:26,8:34:44.72:995,45,0	0/0:13,0:13:33.10:0,33,410	1/1:15,3:18:42.09:607,42,0	0/0:31,0:31:69.07:0,69,797	0/0:17,0:17:32.37:0,32,370	0/0:35,0:35:78.16:0,78,954	0/0:26,0:26:66.08:0,66,764	1/1:6,12:16:0.92:536,1,0	1/1:0,14:14:21.07:348,21,0	1/1:13,53:67:54.18:903,54,0	0/0:19,0:19:23.14:0,23,328	0/0:9,0:9:9.03:0,9,115	0/0:37,0:37:37.42:0,37,533	0/0:16,0:16:30.02:0,30,335	1/1:4,16:20:24.51:776,25,0	1/1:10,8:18:51.09:764,51,0	1/1:8,1:9:21.03:295,21,0
chr10	91097782	.	G	GCACACACA	4865.92	PASS	AB=0.871;AC=37;AF=0.712;AN=52;BaseQRankSum=1.602;DP=667;FS=23.491;HRun=0;HaplotypeScore=196.2247;InbreedingCoeff=0.3491;MQ=50.05;MQ0=10;MQRankSum=-2.900;QD=9.58;ReadPosRankSum=-0.916;VQSLOD=2.0314;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:46:32.84:0,33,691	0/0:10,0:10:6.02:0,6,115	./.	./.	1/1:18,0:20:11.98:120,12,0	1/1:6,4:15:5.75:111,6,0	1/1:14,5:21:0.01:0,0,0	1/1:16,0:16:9:143,9,0	0/1:17,0:21:40.44:418,0,40	1/1:15,5:21:24.06:614,24,0	0/1:13,0:18:0:0,0,0	0/1:25,0:33:51.50:382,0,52	1/1:14,1:20:6.63:183,7,0	1/1:22,0:24:12.01:136,12,0	0/1:22,0:24:0.03:0,0,324	1/1:13,6:22:9.17:309,9,0	0/0:29,0:35:36:0,36,765	0/1:19,7:32:10.55:741,0,11	1/1:17,1:16:9.02:208,9,0	1/1:17,0:18:5.96:44,6,0	1/1:64,0:65:24.68:359,25,0	0/0:12,1:21:2.88:0,3,16	0/1:13,0:12:0:0,0,0	1/1:22,7:37:9.48:253,9,0	1/1:13,0:17:2.99:24,3,0	0/1:22,1:24:19.84:490,0,20	1/1:16,0:18:13.57:149,14,0	1/1:5,0:9:10.26:183,10,0
chr10	91098451	.	GTGTC	G	2357.54	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=5.621;DP=475;FS=18.616;HRun=0;HaplotypeScore=111.8935;InbreedingCoeff=0.7913;MQ=58.80;MQ0=9;MQRankSum=1.057;QD=10.77;ReadPosRankSum=-2.364;VQSLOD=0.9681;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:32:5.94:0,6,1139	0/0:7,0:7:18.03:0,18,383	0/0:19,0:13:6.01:0,6,59	0/1:13,0:7:3.89:4,0,46	1/1:23,2:25:47.52:417,48,0	0/0:11,0:11:11.67:0,12,96	0/0:19,0:19:1.80:0,2,435	1/1:31,0:30:29.84:234,30,0	1/1:15,0:15:38.21:256,38,0	0/0:24,0:24:47.97:0,48,798	0/0:10,0:10:12:0,12,132	1/1:15,0:15:23.52:141,24,0	0/0:9,0:9:15.03:0,15,229	1/1:4,0:4:8.83:53,9,0	0/0:17,0:17:39.11:0,39,864	0/0:12,0:12:18.06:0,18,349	0/0:29,0:29:66.15:0,66,1319	0/0:13,0:13:8.19:0,8,204	1/1:22,0:19:20.92:183,21,0	1/1:16,1:16:23.65:193,24,0	1/1:16,1:17:23.67:186,24,0	0/0:11,0:10:3.01:0,3,58	0/0:10,0:10:9.03:0,9,134	0/0:16,0:16:2.78:0,3,24	0/0:17,0:17:8.99:0,9,75	1/1:28,2:28:65.60:608,66,0	1/1:21,0:21:34.40:190,34,0	1/1:9,0:9:19.22:101,19,0
chr10	91098479	.	CTG	C	6128.36	PASS	AB=0.863;AC=23;AF=0.411;AN=56;BaseQRankSum=6.499;DP=569;FS=9.756;HRun=0;HaplotypeScore=103.9014;InbreedingCoeff=0.5741;MQ=53.22;MQ0=21;MQRankSum=2.800;QD=20.23;ReadPosRankSum=-0.313;VQSLOD=4.6423;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:42.08:0,42,1222	0/0:8,0:8:9.76:0,10,314	0/0:19,0:5:11.86:0,12,108	0/0:43,0:16:19.83:0,20,287	1/1:14,7:21:59.68:688,60,0	0/0:12,0:12:12.01:0,12,97	0/1:24,0:21:96:96,0,316	1/1:33,0:29:54.03:542,54,0	1/1:5,17:22:63.16:809,63,0	0/1:24,0:24:34.82:35,0,406	0/0:14,0:14:14.74:0,15,118	0/1:4,16:20:1.67:413,0,2	0/0:13,0:13:13.57:0,14,125	1/1:2,5:7:15.04:195,15,0	0/0:16,0:16:36.84:0,37,775	0/0:13,0:13:18.04:0,18,195	0/0:28,0:28:69.87:0,70,1174	0/1:14,0:13:48.15:48,0,114	0/1:13,6:15:26.06:330,0,26	1/1:5,14:18:32.89:435,33,0	1/1:7,19:25:15.48:524,15,0	0/0:13,0:12:3:0,3,32	0/0:13,0:13:8.95:0,9,89	0/0:16,0:16:2.88:0,3,24	0/0:19,0:19:8.99:0,9,75	1/1:9,28:35:62.89:946,63,0	1/1:4,24:28:56.73:748,57,0	1/1:0,9:9:21.07:320,21,0
chr10	91098481	.	G	GTCTCTCTCTC	3953.33	PASS	AB=0.707;AC=19;AF=0.339;AN=56;BaseQRankSum=-6.770;DP=598;FS=11.170;HRun=0;HaplotypeScore=187.8667;InbreedingCoeff=0.7869;MQ=54.20;MQ0=21;MQRankSum=-3.676;QD=19.28;ReadPosRankSum=-2.232;VQSLOD=1.8744;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:40:78.23:0,78,1894	0/0:6,0:8:21.07:0,21,576	0/1:23,0:6:0.83:1,0,18	0/0:44,0:16:20.07:0,20,402	0/0:22,0:22:46.19:0,46,791	0/0:12,0:12:0:0,0,0	1/1:24,0:21:24.89:476,25,0	0/0:35,0:31:38.61:0,39,350	0/0:22,0:22:57.57:0,58,986	1/1:5,18:27:60.62:1523,61,0	1/1:4,7:16:2.92:91,3,0	0/0:20,0:20:30.79:0,31,656	1/1:2,11:15:12.04:492,12,0	0/0:7,0:7:14.97:0,15,241	0/0:15,0:16:45.15:0,45,1265	1/1:3,10:14:15.05:663,15,0	0/0:29,0:29:66.07:0,66,1657	1/1:14,0:14:24.08:528,24,0	0/0:18,0:15:5.65:0,6,383	0/0:19,0:18:33:0,33,603	0/0:27,0:26:45.14:0,45,699	1/1:1,11:12:3.01:51,3,0	1/1:14,0:14:12.01:130,12,0	0/1:6,11:20:0.14:0,0,1	0/1:3,15:24:0:0,0,0	0/0:37,0:35:48.66:0,49,1004	0/0:27,0:27:56.38:0,56,892	0/0:9,0:9:21.07:0,21,467
chr10	91098501	.	C	CTG	6681.65	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=3.464;DP=647;FS=7.537;HRun=0;HaplotypeScore=122.9946;InbreedingCoeff=0.5641;MQ=66.64;MQ0=17;MQRankSum=0.119;QD=18.51;ReadPosRankSum=3.089;VQSLOD=4.9173;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:98.80:0,99,1109	0/0:10,0:10:27.05:0,27,319	0/0:35,0:18:39.59:0,40,404	0/0:58,0:27:46.86:0,47,577	1/1:19,3:22:51.20:492,51,0	0/1:15,0:15:4.14:4,0,126	0/0:22,0:19:10.74:0,11,189	1/1:8,42:48:99:1289,117,0	1/1:22,3:25:71.74:774,72,0	0/1:22,0:22:96.60:97,0,120	0/1:17,0:17:0.61:1,0,103	1/1:24,0:24:39.17:441,39,0	0/1:16,0:16:18.58:19,0,35	1/1:5,2:7:14.99:174,15,0	0/0:20,0:20:57.10:0,57,675	0/1:11,0:11:10.02:28,0,10	0/0:31,0:31:86.72:0,87,979	0/1:13,0:12:25.94:50,0,26	1/1:16,1:13:15.34:398,15,0	1/1:22,2:23:51.07:489,51,0	1/1:25,4:28:46.44:713,46,0	0/0:14,0:13:2.05:0,2,65	0/0:16,0:16:6.46:0,6,50	0/0:18,0:18:14.27:0,14,119	0/0:19,0:19:6:0,6,51	1/1:29,3:31:69.36:895,69,0	1/1:24,3:27:62.67:688,63,0	1/1:9,0:9:20.20:132,20,0
chr10	91101364	.	A	AT	967.08	PASS	AB=0.795;AC=17;AF=0.304;AN=56;BaseQRankSum=-2.733;DP=448;FS=7.733;HRun=15;HaplotypeScore=61.0482;InbreedingCoeff=-0.0117;MQ=70.05;MQ0=19;MQRankSum=-0.137;QD=4.00;ReadPosRankSum=-0.339;VQSLOD=0.4281;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:27:52.03:0,52,289	0/0:6,0:7:7.89:0,8,42	0/1:34,0:15:9.17:9,0,13	0/1:34,0:13:1.78:2,0,26	0/0:15,1:18:0.24:0,0,104	1/1:3,6:9:2.89:124,3,0	0/1:10,6:13:3.03:86,0,3	0/0:16,0:19:29.25:0,29,158	0/0:13,0:13:10.62:0,11,59	0/1:8,5:15:19.81:110,0,20	0/1:8,5:13:19.11:50,0,19	0/0:8,0:8:14.52:0,15,86	0/1:4,5:9:18.55:60,0,19	0/1:15,0:14:1.96:2,0,74	0/0:3,0:2:2.84:0,3,18	0/1:4,1:6:15.83:17,0,16	0/0:25,0:27:58.09:0,58,326	0/1:14,6:16:26.56:100,0,27	0/0:20,0:26:55.98:0,56,295	0/0:12,0:11:17.51:0,18,105	0/0:9,0:8:19.61:0,20,108	0/1:7,5:12:15.57:83,0,16	0/1:4,7:10:2.03:86,0,2	1/1:3,16:19:35.96:302,36,0	0/1:5,6:11:3.08:78,0,3	0/0:15,0:13:17.55:0,18,108	0/0:17,0:19:12.46:0,12,146	0/1:15,1:11:13.80:14,0,42
chr10	91101911	.	TG	T	10140.44	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=9.071;DP=548;FS=10.574;HRun=8;HaplotypeScore=59.3511;InbreedingCoeff=0.9976;MQ=76.48;MQ0=0;MQRankSum=-2.257;QD=23.86;ReadPosRankSum=3.026;VQSLOD=5.1695;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.22:0,72,869	0/0:14,0:14:36.09:0,36,414	0/0:19,0:19:26.52:0,27,313	0/0:11,0:11:27.38:0,27,287	1/1:1,14:15:38.94:354,39,0	1/1:1,14:15:39.06:377,39,0	1/1:5,11:16:30.04:290,30,0	1/1:8,24:32:68.96:648,69,0	1/1:1,16:17:45.07:435,45,0	1/1:1,23:24:66.10:637,66,0	1/1:1,21:22:60.10:579,60,0	1/1:0,19:19:51.08:493,51,0	1/1:2,12:14:33.05:319,33,0	1/1:1,12:13:39.06:376,39,0	0/0:23,0:23:63.19:0,63,761	1/1:2,13:15:30.05:290,30,0	0/0:27,2:29:49.23:0,49,862	1/1:1,16:17:45.07:435,45,0	1/1:6,20:26:60.06:568,60,0	1/1:4,17:21:51.08:493,51,0	1/1:2,8:10:18.02:174,18,0	1/1:4,16:20:45.07:434,45,0	1/1:0,19:19:48.08:464,48,0	1/1:1,17:18:44.92:434,45,0	1/1:1,15:16:42.07:406,42,0	1/1:4,28:32:81.12:778,81,0	1/1:1,27:28:78.12:753,78,0	1/1:2,14:16:42.07:406,42,0
chr10	91102122	.	T	TG	1624.05	PASS	AB=0.682;AC=20;AF=0.357;AN=56;BaseQRankSum=1.886;DP=480;FS=25.858;HRun=9;HaplotypeScore=89.6918;InbreedingCoeff=0.6831;MQ=84.34;MQ0=1;MQRankSum=-1.160;QD=9.39;ReadPosRankSum=-4.512;VQSLOD=-0.4502;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:31.81:0,32,284	0/0:8,0:8:20.99:0,21,182	0/0:28,0:23:34.64:0,35,301	0/1:30,1:25:20.97:21,0,169	0/0:26,0:26:50.96:0,51,442	0/1:3,8:11:4.92:178,0,5	0/1:7,13:20:18.76:266,0,19	0/0:22,0:22:6.29:0,6,187	0/0:23,0:23:62.92:0,63,535	0/1:4,8:12:2.01:197,0,2	1/1:3,8:11:12.03:133,12,0	0/0:16,0:16:32.98:0,33,286	1/1:4,6:10:9.02:100,9,0	0/0:10,0:10:20.99:0,21,182	0/0:19,0:20:59.03:0,59,501	1/1:4,9:13:18.03:191,18,0	0/0:25,0:25:59.94:0,60,517	1/1:4,6:10:13.86:149,14,0	0/0:11,0:11:23.98:0,24,207	0/0:25,0:25:44.96:0,45,390	0/0:22,0:21:41.97:0,42,364	1/1:8,11:19:15.04:166,15,0	1/1:9,5:14:21.05:225,21,0	1/1:3,8:11:8.90:99,9,0	1/1:2,7:10:9.02:100,9,0	0/0:21,0:21:35.98:0,36,312	0/0:21,0:21:27.20:0,27,363	0/0:8,0:8:11.95:0,12,103
chr10	91102185	.	AC	A	7442.68	PASS	AB=0.984;AC=46;AF=0.821;AN=56;BaseQRankSum=8.572;DP=715;FS=2.252;HRun=1;HaplotypeScore=130.0575;InbreedingCoeff=0.7574;MQ=71.72;MQ0=7;MQRankSum=0.267;QD=12.28;ReadPosRankSum=0.219;VQSLOD=3.5441;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:33.91:0,34,789	0/0:10,0:10:27.73:0,28,231	0/1:51,0:17:16.63:17,0,135	0/1:59,2:34:37.31:37,0,157	1/1:29,3:32:78.25:527,78,0	1/1:22,2:24:62.87:410,63,0	1/1:23,2:25:69.63:442,70,0	1/1:26,0:26:48.25:349,48,0	1/1:18,0:18:44.60:245,45,0	1/1:29,0:27:69.37:477,69,0	1/1:18,1:19:47.93:307,48,0	1/1:16,1:17:46.07:247,46,0	1/1:16,0:16:37.20:204,37,0	1/1:23,0:23:58.49:309,58,0	0/0:20,0:20:22.45:0,22,407	1/1:12,0:13:25.43:135,25,0	0/0:36,0:36:74:0,74,826	1/1:15,2:17:39.58:238,40,0	1/1:25,0:25:56.79:324,57,0	1/1:31,1:32:86.23:526,86,0	1/1:23,3:24:58.45:400,58,0	1/1:24,3:27:73.11:467,73,0	1/1:20,1:21:55.66:334,56,0	1/1:16,0:16:37.26:194,37,0	1/1:9,0:9:21.61:111,22,0	1/1:23,0:23:55.17:325,55,0	1/1:33,0:33:70.14:414,70,0	1/1:19,3:22:57.67:404,58,0
chr10	91102188	.	A	AC	3092.69	PASS	AB=0.980;AC=25;AF=0.446;AN=56;BaseQRankSum=1.337;DP=718;FS=81.216;HRun=0;HaplotypeScore=143.7852;InbreedingCoeff=-0.3920;MQ=69.73;MQ0=7;MQRankSum=4.013;QD=6.21;ReadPosRankSum=3.320;VQSLOD=0.4629;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1479	0/0:10,0:10:30.07:0,30,395	0/0:50,0:15:31.23:0,31,261	0/0:60,0:33:34:0,34,355	0/1:30,1:32:69.37:213,0,69	0/1:23,1:24:66.14:139,0,66	1/1:23,0:23:9.86:148,10,0	0/1:29,0:29:98.70:114,0,99	0/1:18,0:18:43.23:85,0,43	0/1:30,0:28:18.32:215,0,18	1/1:18,1:19:1.40:186,1,0	0/1:18,0:18:23.43:117,0,23	0/1:17,0:17:38.88:100,0,39	0/1:20,1:21:25.02:137,0,25	0/0:22,0:22:54.16:0,54,698	0/1:14,0:14:10.18:84,0,10	0/0:35,0:35:81.46:0,81,1171	0/1:16,0:16:12.94:80,0,13	0/1:27,0:27:11.03:188,0,11	0/1:31,0:31:61.35:190,0,61	0/1:27,0:25:34.09:222,0,34	0/1:26,0:26:7.18:144,0,7	0/1:21,1:22:13.82:160,0,14	0/1:16,0:16:38.08:79,0,38	1/1:10,0:10:3.88:84,4,0	0/1:23,1:24:17.95:192,0,18	0/1:33,1:34:59.18:186,0,59	0/1:17,3:20:8.32:195,0,8
chr10	91102992	.	TCAGACAACGGGA	T	9785.98	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=13.640;DP=393;FS=0.425;HRun=0;HaplotypeScore=165.1534;InbreedingCoeff=0.9924;MQ=84.31;MQ0=0;MQRankSum=-12.185;QD=90.61;ReadPosRankSum=2.354;VQSLOD=4.9716;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.32:0,93,5306	0/0:10,0:10:30.08:0,30,1624	0/0:16,0:16:48.16:0,48,2211	0/0:12,0:12:33.11:0,33,1844	1/1:0,10:10:24.08:794,24,0	0/0:15,0:15:45.15:0,45,2757	0/0:15,0:15:45.15:0,45,2641	1/1:0,10:10:30.10:949,30,0	1/1:0,6:6:18.06:631,18,0	0/0:19,0:19:53.93:0,54,3000	0/0:18,0:18:54.19:0,54,3322	1/1:0,12:12:36.12:1261,36,0	0/0:15,0:15:45.15:0,45,2595	1/1:3,16:19:57.20:1793,57,0	0/0:13,0:13:39.12:0,39,2261	0/0:11,0:11:33.11:0,33,2054	0/0:32,0:32:96.33:0,96,5691	0/0:25,0:25:75.17:0,75,4178	1/1:0,6:6:18.06:637,18,0	1/1:0,7:7:17.99:462,18,0	1/1:4,4:8:18.03:359,18,0	0/0:6,0:6:18.05:0,18,984	0/0:11,0:11:33.11:0,33,1747	0/0:19,0:19:57.15:0,57,3411	0/0:17,0:17:51.18:0,51,3164	1/1:0,11:11:33.11:1158,33,0	1/1:0,6:6:18.06:633,18,0	1/1:2,11:13:36.09:1109,36,0
chr10	91103005	.	TTGC	T	3474.87	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.730;DP=387;FS=4.563;HRun=0;HaplotypeScore=116.6855;InbreedingCoeff=0.9877;MQ=84.93;MQ0=0;MQRankSum=-13.357;QD=31.59;ReadPosRankSum=1.554;VQSLOD=3.9117;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.20:0,81,1676	0/0:9,0:9:27.09:0,27,623	0/0:15,0:15:43.96:0,44,965	0/0:14,0:14:15.34:0,15,681	1/1:2,10:12:30.43:319,30,0	0/0:13,0:13:39.13:0,39,899	0/0:16,0:16:45.15:0,45,1016	1/1:2,8:10:24.08:306,24,0	1/1:1,6:7:20.28:232,20,0	0/0:17,0:17:45.15:0,45,1038	0/0:21,0:21:60.21:0,60,1383	1/1:0,12:12:36.11:449,36,0	0/0:14,0:14:33.11:0,33,761	1/1:1,16:17:50.33:564,50,0	0/0:17,0:17:51.18:0,51,1175	0/0:10,0:10:27.09:0,27,614	0/0:29,0:29:84.26:0,84,1881	0/0:23,0:23:66.16:0,66,1426	1/1:0,6:6:18.06:231,18,0	1/1:3,5:8:17.98:190,18,0	1/1:1,4:5:14.30:120,14,0	0/0:5,0:5:15.05:0,15,345	0/0:9,0:9:24.08:0,24,553	0/0:17,0:17:48.16:0,48,1107	0/0:19,0:19:57.20:0,57,1314	1/1:3,11:14:36.12:429,36,0	1/1:1,6:7:18.06:227,18,0	1/1:1,11:12:34.62:407,35,0
chr10	91106679	.	TTTTTTTTTTTTTTTTTTTTGTTTAAATA	T	4760.70	PASS	AB=0.759;AC=40;AF=0.741;AN=54;BaseQRankSum=-3.760;DP=360;FS=83.333;HRun=0;HaplotypeScore=143.2903;InbreedingCoeff=0.6901;MQ=46.25;MQ0=39;MQRankSum=-1.010;QD=25.19;ReadPosRankSum=0.733;VQSLOD=0.2542;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:8:18.06:0,18,1337	0/0:7,0:5:15.05:0,15,1287	0/0:57,0:5:14.84:0,15,329	0/0:66,0:15:30.21:0,30,587	1/1:0,15:15:3.01:35,3,0	1/1:10,0:10:30.07:364,30,0	1/1:8,0:7:18.05:211,18,0	1/1:3,12:13:36.09:475,36,0	1/1:7,0:7:18.05:221,18,0	1/1:9,0:9:21.54:298,22,0	1/1:1,7:7:9.02:100,9,0	1/1:7,0:7:21.06:250,21,0	1/1:4,0:4:12.04:151,12,0	1/1:6,0:6:18.05:220,18,0	0/0:4,0:2:6.02:0,6,200	1/1:6,0:6:15.05:191,15,0	0/0:20,0:16:33.10:0,33,1382	1/1:10,0:9:21.07:264,21,0	0/1:17,0:9:99:142,0,150	./.	1/1:4,0:3:9.02:98,9,0	1/1:3,0:3:9.03:102,9,0	1/1:11,0:11:29.98:347,30,0	1/1:6,0:6:5.96:68,6,0	1/1:9,0:9:21.05:238,21,0	0/1:1,13:14:99:300,0,162	1/1:12,0:11:33.10:420,33,0	1/1:8,0:7:21.03:263,21,0
chr10	91114923	.	T	TC	18063.73	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-5.310;DP=589;FS=9.392;HRun=3;HaplotypeScore=70.0120;InbreedingCoeff=0.9982;MQ=78.26;MQ0=0;MQRankSum=-4.103;QD=40.87;ReadPosRankSum=1.712;VQSLOD=3.9491;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,126,1633	0/0:8,0:8:24.05:0,24,295	0/0:15,0:15:45.13:0,45,566	0/0:28,0:28:73.77:0,74,944	1/1:0,20:20:57.15:812,57,0	1/1:2,19:21:51.17:764,51,0	1/1:2,25:27:69.06:1034,69,0	1/1:1,34:35:99:1488,102,0	1/1:1,17:18:48.16:719,48,0	1/1:2,20:22:60.20:900,60,0	1/1:1,17:18:42.14:629,42,0	1/1:1,19:20:54.18:809,54,0	1/1:1,16:17:48.16:719,48,0	1/1:0,10:10:30.10:450,30,0	0/0:18,0:18:54.16:0,54,681	1/1:0,26:26:69.23:1034,69,0	0/0:32,0:32:96.31:0,96,1245	1/1:1,28:29:81.27:1201,81,0	1/1:1,16:17:45.15:672,45,0	1/1:1,10:11:30.10:450,30,0	1/1:0,36:36:99:1529,102,0	1/1:0,10:10:27.09:404,27,0	1/1:0,12:12:30.10:449,30,0	1/1:0,29:29:87.29:1304,87,0	1/1:1,16:17:48.16:718,48,0	1/1:0,20:20:57.19:855,57,0	1/1:0,18:18:54.18:809,54,0	1/1:1,8:9:20.94:314,21,0
chr10	91116063	.	AGGT	A	3374.37	PASS	AB=0.862;AC=47;AF=0.870;AN=54;BaseQRankSum=-4.707;DP=283;FS=0.000;HRun=0;HaplotypeScore=43.2686;InbreedingCoeff=0.0260;MQ=47.19;MQ0=6;MQRankSum=0.168;QD=12.59;ReadPosRankSum=-1.900;VQSLOD=2.7293;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:57.48:57,0,137	1/1:3,0:3:5.12:23,5,0	0/1:7,3:4:1.06:24,0,1	0/0:6,0:4:5.53:0,6,47	1/1:8,1:9:17.78:125,18,0	0/1:2,12:14:8.47:85,0,8	1/1:1,13:14:5.79:155,6,0	1/1:1,16:14:38.90:396,39,0	1/1:0,12:12:6.02:73,6,0	1/1:15,3:16:42.51:382,43,0	./.	1/1:1,10:11:10.90:148,11,0	1/1:5,4:8:20.99:244,21,0	1/1:1,11:11:15.04:185,15,0	0/1:7,0:6:55.23:55,0,55	1/1:1,15:16:22.32:338,22,0	0/1:5,0:5:27.59:28,0,39	1/1:0,10:10:12.41:141,12,0	1/1:12,0:11:23.81:187,24,0	1/1:3,6:9:11.35:122,11,0	1/1:2,17:19:8.89:91,9,0	1/1:7,0:5:8.32:52,8,0	1/1:0,7:7:9.02:102,9,0	1/1:2,12:14:2.86:18,3,0	1/1:0,6:6:3.01:49,3,0	1/1:6,1:7:20.80:187,21,0	1/1:3,1:3:5.98:70,6,0	1/1:0,3:3:3.01:39,3,0
chr10	91118124	.	T	TC	12968.36	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-11.456;DP=543;FS=15.991;HRun=4;HaplotypeScore=56.8060;InbreedingCoeff=0.9955;MQ=82.69;MQ0=0;MQRankSum=-5.012;QD=32.50;ReadPosRankSum=1.936;VQSLOD=3.6454;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,1381	0/0:9,0:9:21.06:0,21,237	0/0:23,0:23:65.96:0,66,708	0/0:24,0:22:28.69:0,29,279	1/1:0,15:15:42.14:571,42,0	1/1:4,27:31:69.23:941,69,0	1/1:3,15:18:42.14:574,42,0	1/1:2,23:25:66.22:902,66,0	1/1:1,18:19:42.14:574,42,0	1/1:1,15:17:48.16:651,48,0	1/1:0,11:11:33.11:451,33,0	1/1:3,17:20:42.14:573,42,0	1/1:0,16:16:42.14:573,42,0	1/1:0,16:16:36.12:492,36,0	0/0:14,0:14:42.12:0,42,476	1/1:1,15:16:39.13:533,39,0	0/0:31,0:31:87.19:0,87,954	1/1:1,23:24:54.18:739,54,0	1/1:0,15:15:45.14:595,45,0	1/1:0,12:12:36.05:463,36,0	1/1:2,29:31:72.24:984,72,0	1/1:0,18:18:41.87:519,42,0	1/1:0,11:11:24.08:328,24,0	1/1:2,29:31:69.23:944,69,0	1/1:3,20:23:54.18:739,54,0	1/1:1,8:9:24.01:289,24,0	1/1:2,12:14:17.93:246,18,0	1/1:0,7:7:21.07:287,21,0
chr10	91118323	.	A	AC	3932.34	PASS	AB=0.612;AC=41;AF=0.732;AN=56;BaseQRankSum=-1.561;DP=410;FS=2.278;HRun=9;HaplotypeScore=58.1510;InbreedingCoeff=0.5943;MQ=64.70;MQ0=2;MQRankSum=-1.205;QD=13.28;ReadPosRankSum=-0.233;VQSLOD=3.2726;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:71.02:0,71,604	0/0:8,0:8:11.99:0,12,104	0/0:19,0:11:16.54:0,17,167	0/0:13,0:13:20.22:0,20,136	1/1:1,1:6:8.53:47,9,0	1/1:3,9:13:17.97:183,18,0	1/1:7,21:28:60.16:664,60,0	1/1:8,0:13:9.27:54,9,0	1/1:3,1:12:5.75:29,6,0	0/1:7,10:17:15.92:296,0,16	1/1:1,8:9:9.02:100,9,0	1/1:4,0:12:20.15:109,20,0	0/1:4,11:16:9.27:301,0,9	1/1:2,1:10:14.34:75,14,0	0/0:14,0:14:41.99:0,42,365	1/1:3,10:13:11.04:280,11,0	0/0:31,0:31:80.88:0,81,681	1/1:6,20:27:21.64:453,22,0	1/1:6,0:10:8.66:49,9,0	1/1:6,0:7:3.73:16,4,0	1/1:7,0:20:16.95:86,17,0	0/1:3,4:7:10.65:118,0,11	1/1:1,2:3:3.01:33,3,0	1/1:2,22:24:27.62:538,28,0	1/1:3,11:14:24.06:265,24,0	1/1:3,2:12:23.21:160,23,0	1/1:6,1:15:11.52:63,12,0	1/1:6,0:7:2.88:15,3,0
chr10	91119432	.	C	CG	3192.66	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=12.471;DP=675;FS=6.656;HRun=0;HaplotypeScore=183.1388;InbreedingCoeff=0.7245;MQ=78.05;MQ0=0;MQRankSum=5.132;QD=6.46;ReadPosRankSum=-0.298;VQSLOD=2.7035;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,1784	0/0:17,0:17:45.11:0,45,591	0/0:19,0:19:44.15:0,44,700	0/0:18,0:18:47.70:0,48,605	1/1:17,0:17:0.52:37,1,0	1/1:26,0:26:38.46:252,38,0	1/1:28,0:28:7.41:162,7,0	1/1:28,2:30:21.91:179,22,0	1/1:27,0:27:25.15:95,25,0	1/1:15,1:16:7.49:137,7,0	1/1:5,0:5:1.52:6,2,0	1/1:33,0:33:52.41:216,52,0	1/1:25,0:25:32.26:157,32,0	1/1:27,0:27:18.07:170,18,0	0/0:44,0:44:99:0,129,1765	1/1:23,0:23:51.04:297,51,0	0/0:36,0:36:99:0,102,1387	1/1:24,0:24:50.78:243,51,0	1/1:16,2:18:8.44:222,8,0	1/1:8,0:8:2.40:12,2,0	1/1:56,1:57:70.04:384,70,0	0/1:11,0:11:15.27:23,0,15	1/1:16,0:16:12.94:88,13,0	1/1:39,0:39:69.18:292,69,0	1/1:17,0:17:20.15:142,20,0	1/1:19,0:19:6.58:137,7,0	1/1:22,0:22:15.42:110,15,0	1/1:6,0:6:5.77:20,6,0
chr10	91120079	.	C	CT	23301.36	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=10.758;DP=687;FS=1.970;HRun=0;HaplotypeScore=123.7925;InbreedingCoeff=0.9904;MQ=82.35;MQ0=0;MQRankSum=-5.352;QD=43.47;ReadPosRankSum=1.676;VQSLOD=4.2515;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,147,2035	0/0:5,0:5:15.05:0,15,208	0/0:16,0:16:42.12:0,42,567	0/0:23,0:23:59.81:0,60,736	1/1:0,24:24:63.61:976,64,0	1/1:0,16:16:48.16:767,48,0	1/1:0,33:33:90.31:1438,90,0	1/1:3,20:23:66.21:1026,66,0	1/1:1,23:24:69.19:1073,69,0	1/1:0,31:31:93.30:1440,93,0	1/1:0,12:12:30.02:448,30,0	1/1:0,26:26:72.25:1151,72,0	1/1:0,20:20:60.20:958,60,0	1/1:2,23:25:63.21:1004,63,0	0/0:20,0:20:54.08:0,54,706	1/1:2,20:22:54.18:863,54,0	0/0:38,0:38:99:0,114,1572	1/1:0,32:32:87.30:1390,87,0	1/1:0,22:22:66.20:1009,66,0	1/1:0,12:12:36.12:575,36,0	1/1:2,51:54:99:2335,148,0	1/1:0,32:32:81.28:1294,81,0	1/1:1,15:16:39.13:623,39,0	1/1:0,43:43:99:1822,114,0	1/1:0,16:16:42.14:671,42,0	1/1:0,26:26:78.27:1240,78,0	1/1:0,23:23:63.21:1007,63,0	1/1:0,4:4:12.04:192,12,0
chr10	91120391	.	GGGT	G	15046.72	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=7.342;DP=468;FS=0.000;HRun=0;HaplotypeScore=102.7513;InbreedingCoeff=0.9442;MQ=64.55;MQ0=2;MQRankSum=-3.241;QD=37.81;ReadPosRankSum=2.774;VQSLOD=5.7518;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.13:0,60,1061	0/0:4,0:4:8.99:0,9,117	0/0:12,0:8:2.77:0,3,117	0/0:10,0:6:17.79:0,18,220	1/1:2,13:15:35.95:502,36,0	1/1:0,12:12:33.11:537,33,0	1/1:0,35:35:81.19:1258,81,0	1/1:0,12:12:36.07:531,36,0	1/1:2,11:13:29.96:465,30,0	1/1:3,19:22:60.16:919,60,0	1/1:0,10:10:21.07:341,21,0	1/1:1,21:22:63.21:1011,63,0	1/1:0,10:10:30.10:487,30,0	1/1:1,28:29:65.94:1018,66,0	0/0:9,0:9:27.08:0,27,521	1/1:1,23:24:60.12:918,60,0	0/0:13,0:13:35.27:0,35,606	1/1:0,20:20:51.12:800,51,0	1/1:1,7:8:24.07:356,24,0	1/1:1,12:13:33.11:526,33,0	1/1:0,39:39:71.23:1121,71,0	1/1:0,20:20:51.12:799,51,0	1/1:1,12:13:24.08:388,24,0	1/1:1,24:25:50.97:830,51,0	1/1:3,13:16:39.12:599,39,0	1/1:1,21:22:60.09:891,60,0	1/1:0,11:11:30:486,30,0	1/1:1,6:7:18.01:263,18,0
chr10	91121615	.	AG	A	12764.41	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=9.757;DP=441;FS=4.241;HRun=1;HaplotypeScore=74.9268;InbreedingCoeff=0.9966;MQ=82.33;MQ0=0;MQRankSum=-6.301;QD=39.15;ReadPosRankSum=1.317;VQSLOD=5.5923;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.24:0,69,1102	0/0:12,0:12:36.12:0,36,574	0/0:21,0:21:57.16:0,57,836	0/0:15,0:15:41.33:0,41,588	1/1:1,18:19:42.08:548,42,0	1/1:0,20:20:60.20:839,60,0	1/1:1,18:19:57.16:774,57,0	1/1:0,18:18:54.18:755,54,0	1/1:0,15:15:42.14:585,42,0	1/1:0,6:6:18.05:235,18,0	1/1:0,9:9:23.97:292,24,0	1/1:0,17:17:51.17:713,51,0	1/1:0,18:18:54.15:733,54,0	1/1:0,20:20:60.20:839,60,0	0/0:22,0:22:66.23:0,66,1055	1/1:0,16:16:48.16:671,48,0	0/0:22,0:22:66.21:0,66,1025	1/1:2,15:17:48.16:669,48,0	1/1:0,7:7:21.07:287,21,0	1/1:2,11:13:39.12:528,39,0	1/1:1,18:19:54.12:712,54,0	1/1:0,19:18:54.14:733,54,0	1/1:1,12:13:36.12:503,36,0	1/1:0,14:14:36.11:503,36,0	1/1:0,10:9:27.05:355,27,0	1/1:0,13:13:39.13:544,39,0	1/1:0,14:14:42.14:585,42,0	1/1:2,8:10:27.08:360,27,0
chr10	91121669	.	A	AT	9754.77	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=9.097;DP=442;FS=0.461;HRun=7;HaplotypeScore=103.9175;InbreedingCoeff=0.9660;MQ=76.96;MQ0=0;MQRankSum=-4.148;QD=29.12;ReadPosRankSum=-0.737;VQSLOD=4.0205;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:54.07:0,54,521	0/0:6,0:6:15.02:0,15,145	0/0:12,0:12:23.84:0,24,205	0/0:19,0:19:5.45:0,5,260	1/1:3,21:24:37.16:683,37,0	1/1:2,15:17:51.16:615,51,0	1/1:4,12:16:39.08:455,39,0	1/1:6,29:35:87.20:1011,87,0	1/1:2,12:14:36.11:429,36,0	1/1:0,5:5:15.04:173,15,0	1/1:4,11:15:33.10:398,33,0	1/1:4,9:13:33.08:383,33,0	1/1:2,16:18:45.14:541,45,0	1/1:2,11:13:33.10:395,33,0	0/0:20,0:20:42.04:0,42,399	1/1:1,7:8:17.70:217,18,0	0/0:25,0:25:72.09:0,72,688	1/1:4,18:22:54.15:640,54,0	1/1:2,12:14:36.11:435,36,0	1/1:0,9:9:27.08:323,27,0	1/1:4,11:15:30.09:360,30,0	1/1:3,11:13:30.09:355,30,0	1/1:2,11:13:33.10:398,33,0	1/1:5,12:17:39.08:454,39,0	1/1:6,7:12:24.05:265,24,0	1/1:1,12:13:36.11:431,36,0	1/1:2,14:16:39.12:470,39,0	1/1:3,8:11:27.08:326,27,0
chr10	91122462	.	T	TCA	487.01	PASS	AB=0.970;AC=19;AF=0.339;AN=56;BaseQRankSum=8.023;DP=670;FS=4.912;HRun=0;HaplotypeScore=261.1816;InbreedingCoeff=0.7255;MQ=60.06;MQ0=4;MQRankSum=-7.023;QD=1.91;ReadPosRankSum=-1.574;VQSLOD=2.1293;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,123,1502	0/0:6,0:6:12.04:0,12,147	0/0:36,0:28:14.78:0,15,471	0/0:34,0:24:26.21:0,26,324	0/0:24,0:24:5.94:0,6,44	1/1:17,0:17:11.15:30,11,0	1/1:30,0:30:13.58:42,14,0	0/0:25,0:25:47.97:0,48,494	0/0:13,0:13:18.33:0,18,153	1/1:28,0:28:31.01:158,31,0	0/1:17,0:17:3.25:3,0,26	0/0:29,0:29:45.03:0,45,413	1/1:21,0:21:9.39:68,9,0	0/0:16,0:17:26.80:0,27,238	0/0:26,0:26:60.17:0,60,721	0/1:23,0:23:3.91:40,0,4	0/0:19,0:19:39.12:0,39,477	0/1:18,2:20:4.38:107,0,4	0/0:17,0:17:27.02:0,27,266	0/0:17,0:17:26.95:0,27,241	0/0:37,0:37:11.81:0,12,124	1/1:36,2:38:27.21:179,27,0	1/1:20,0:20:2.75:7,3,0	1/1:24,0:24:8.66:27,9,0	1/1:16,0:16:4.66:13,5,0	0/0:22,0:22:45.04:0,45,433	0/0:28,0:28:51.09:0,51,497	0/0:18,0:18:31.13:0,31,260
chr10	91122476	.	ACATACGCG	A	12593.40	PASS	AB=0.886;AC=40;AF=0.714;AN=56;BaseQRankSum=14.094;DP=669;FS=1.765;HRun=0;HaplotypeScore=243.7688;InbreedingCoeff=0.5772;MQ=52.62;MQ0=4;MQRankSum=-12.769;QD=25.44;ReadPosRankSum=4.544;VQSLOD=4.0995;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,4933	0/0:5,0:5:15.05:0,15,622	0/0:42,0:27:54.61:0,55,1242	0/0:32,0:18:38.72:0,39,924	1/1:21,0:21:5.92:107,6,0	1/1:1,17:19:21.07:601,21,0	1/1:6,19:25:21.07:601,21,0	1/1:27,0:27:18.98:597,19,0	1/1:15,0:15:21.07:349,21,0	1/1:3,22:25:54.18:1370,54,0	1/1:3,13:16:12.02:281,12,0	1/1:30,0:30:23.17:704,23,0	1/1:3,14:17:36.12:981,36,0	1/1:19,0:19:30.10:475,30,0	0/0:27,0:27:78.23:0,78,2629	1/1:2,21:23:39.13:1079,39,0	0/0:22,0:22:59.99:0,60,2204	0/1:3,15:18:33.71:704,0,34	1/1:14,0:14:3.57:392,4,0	1/1:18,0:18:27.02:413,27,0	0/1:41,0:41:36.05:86,0,36	1/1:7,30:37:51.15:1334,51,0	1/1:3,12:15:5.68:171,6,0	1/1:2,25:27:15.05:429,15,0	1/1:3,15:17:9.03:258,9,0	0/1:27,0:27:28.15:584,0,28	1/1:28,0:28:51.16:773,51,0	0/1:15,0:14:42.43:305,0,42
chr10	91122479	.	TACGCGCACAC	T	15430.41	PASS	AB=0.786;AC=42;AF=0.750;AN=56;BaseQRankSum=13.953;DP=649;FS=1.788;HRun=0;HaplotypeScore=241.4074;InbreedingCoeff=0.7375;MQ=53.00;MQ0=4;MQRankSum=-12.122;QD=32.69;ReadPosRankSum=3.478;VQSLOD=4.4538;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,129,5635	0/0:5,0:5:15.05:0,15,768	0/0:46,0:28:60.80:0,61,1417	0/0:31,0:18:47.34:0,47,1259	1/1:0,23:23:6.02:198,6,0	1/1:18,0:18:21.07:388,21,0	1/1:20,0:20:21.07:383,21,0	1/1:1,23:24:66.16:1279,66,0	1/1:0,14:15:21.07:665,21,0	1/1:22,0:22:54.18:1049,54,0	1/1:13,1:14:12.04:237,12,0	1/1:0,28:28:45.15:1463,45,0	1/1:15,0:15:36.12:672,36,0	1/1:1,19:20:29.79:906,30,0	0/0:27,0:27:74.55:0,75,3072	1/1:21,1:22:39.13:766,39,0	0/0:21,0:21:63.21:0,63,2811	0/1:17,1:18:99:523,0,113	1/1:1,14:15:41.96:878,42,0	1/1:0,18:18:27.09:832,27,0	1/1:4,37:41:6.32:199,6,0	1/1:34,1:35:47.96:818,48,0	1/1:13,0:13:5.68:109,6,0	1/1:25,0:25:15.05:275,15,0	1/1:16,0:15:9.03:166,9,0	1/1:3,25:28:56.24:1284,56,0	1/1:0,27:27:51.18:1671,51,0	0/1:6,9:14:27.05:670,0,27
chr10	91122969	.	AAC	A	627.38	PASS	AB=1.000;AC=28;AF=0.519;AN=54;BaseQRankSum=7.538;DP=289;FS=5.600;HRun=0;HaplotypeScore=78.4403;InbreedingCoeff=0.4421;MQ=59.60;MQ0=4;MQRankSum=-2.558;QD=4.45;ReadPosRankSum=-0.006;VQSLOD=1.9621;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.28:0,81,1431	0/0:9,0:9:27.07:0,27,427	0/0:18,0:7:17.40:0,17,254	0/0:8,0:3:2.37:0,2,8	1/1:8,2:8:1.45:42,1,0	0/1:15,0:15:0.06:0,0,64	0/0:8,0:8:5.24:0,5,36	1/1:6,0:6:7.59:19,8,0	1/1:5,1:6:6.09:70,6,0	0/1:6,0:6:2.24:2,0,17	0/1:9,0:8:13.84:14,0,14	1/1:6,0:5:2.33:31,2,0	0/1:5,0:5:2.76:3,0,28	0/0:3,0:3:0.87:0,1,2	0/0:17,0:17:48.15:0,48,822	0/1:10,0:10:2.18:2,0,70	0/0:25,0:25:72.21:0,72,1222	0/0:15,0:15:25.79:0,26,142	1/1:11,2:10:15.54:121,16,0	1/1:5,0:5:0.71:15,1,0	1/1:3,0:3:5.97:56,6,0	./.	1/1:5,0:5:0.32:2,0,0	0/1:7,0:6:1.58:2,0,11	0/0:15,0:15:9.35:0,9,103	1/1:15,0:15:23.84:172,24,0	1/1:14,2:16:27:220,27,0	1/1:4,0:3:2.11:17,2,0
chr10	91122970	.	AC	A	1467.70	PASS	AC=42;AF=0.778;AN=54;BaseQRankSum=10.332;DP=276;FS=4.372;HRun=1;HaplotypeScore=69.5943;InbreedingCoeff=0.6990;MQ=60.71;MQ0=3;MQRankSum=-4.170;QD=8.58;ReadPosRankSum=0.094;VQSLOD=0.9712;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.22:0,81,1127	0/0:9,0:9:27.06:0,27,348	0/0:18,0:7:9.71:0,10,170	0/0:7,0:3:0.47:0,0,1	1/1:9,1:8:4.84:42,5,0	1/1:12,3:15:37.37:237,37,0	1/1:6,1:7:7.24:44,7,0	1/1:6,0:6:7.95:20,8,0	1/1:5,1:6:9.78:64,10,0	1/1:5,0:5:9.31:57,9,0	1/1:7,2:8:19.19:146,19,0	1/1:3,1:3:3.48:29,3,0	1/1:4,1:5:5.29:35,5,0	1/1:2,0:2:0.47:1,0,0	0/0:17,0:17:48.13:0,48,649	1/1:7,2:9:18.69:120,19,0	0/0:24,0:24:72.20:0,72,970	1/1:13,1:14:25.09:117,25,0	1/1:12,0:9:15.29:96,15,0	1/1:4,1:5:3.82:16,4,0	1/1:2,1:3:5.82:32,6,0	./.	1/1:3,0:5:5.93:47,6,0	1/1:3,3:5:11.44:72,11,0	1/1:12,1:13:20.60:138,21,0	1/1:13,2:15:22.41:137,22,0	1/1:15,1:16:28.88:170,29,0	1/1:4,0:3:3.31:14,3,0
chr10	91123110	.	TAAAA	T	5757.64	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=3.130;DP=338;FS=4.198;HRun=14;HaplotypeScore=62.9987;InbreedingCoeff=0.8280;MQ=71.27;MQ0=11;MQRankSum=-4.523;QD=28.36;ReadPosRankSum=2.810;VQSLOD=3.9517;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.21:0,69,1400	0/0:4,0:5:12.04:0,12,249	0/0:48,0:19:29.86:0,30,283	0/0:26,0:13:16.30:0,16,136	1/1:1,10:11:20.91:264,21,0	1/1:5,14:18:27.02:382,27,0	1/1:0,5:6:18.04:235,18,0	1/1:5,21:26:53.07:830,53,0	1/1:0,9:9:18.06:255,18,0	1/1:2,10:12:30.06:406,30,0	1/1:1,5:6:15.05:193,15,0	1/1:0,6:6:12.04:169,12,0	1/1:0,5:4:6.02:85,6,0	1/1:1,2:3:3:42,3,0	0/0:3,0:3:8.98:0,9,118	1/1:0,8:8:15.05:212,15,0	0/0:25,0:25:72.23:0,72,1612	1/1:1,11:12:20.82:297,21,0	1/1:1,12:12:36.12:501,36,0	1/1:0,3:3:6.02:84,6,0	1/1:2,6:8:12:170,12,0	1/1:0,1:1:3.01:42,3,0	1/1:2,3:5:8.98:127,9,0	1/1:1,6:7:18.05:255,18,0	1/1:0,9:9:17.91:254,18,0	1/1:2,12:14:33.06:444,33,0	1/1:1,11:12:27.09:382,27,0	1/1:3,5:7:8.98:127,9,0
chr10	91123451	.	T	TG	3566.86	PASS	AB=0.690;AC=34;AF=0.607;AN=56;BaseQRankSum=3.498;DP=496;FS=15.932;HRun=10;HaplotypeScore=101.6396;InbreedingCoeff=0.1638;MQ=66.92;MQ0=1;MQRankSum=-2.419;QD=9.15;ReadPosRankSum=-0.644;VQSLOD=0.7872;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,1:40:32.90:0,33,466	0/0:8,0:8:14.96:0,15,123	0/0:11,0:11:11.05:0,11,114	0/0:11,0:9:4.70:0,5,71	0/1:8,7:15:38.09:78,0,38	1/1:4,9:13:22.87:228,23,0	0/1:10,10:20:16.27:241,0,16	0/1:13,5:18:34.23:71,0,34	0/1:9,6:15:6.60:142,0,7	1/1:18,0:18:0.47:1,0,0	0/1:7,2:9:15.21:55,0,15	0/1:8,13:21:16.16:255,0,16	1/1:10,8:18:21.05:221,21,0	0/1:7,7:14:3.59:158,0,4	0/0:15,1:15:32.92:0,33,267	0/1:9,10:19:49.87:135,0,50	0/0:18,1:19:12.96:0,13,313	1/1:6,22:28:1.84:430,2,0	1/1:11,4:15:17.91:160,18,0	1/1:9,4:13:3.01:32,3,0	0/1:18,17:35:38.05:233,0,38	1/1:4,6:10:12.03:128,12,0	1/1:9,4:13:6.02:64,6,0	0/1:9,13:22:81.10:246,0,81	1/1:7,8:15:9.02:96,9,0	1/1:16,9:25:18.03:184,18,0	1/1:9,10:19:18.84:248,19,0	1/1:9,6:15:15.04:160,15,0
chr10	91123631	.	A	ATCGGG	36015.33	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-11.690;DP=701;FS=2.755;HRun=0;HaplotypeScore=119.0014;InbreedingCoeff=0.9516;MQ=84.39;MQ0=0;MQRankSum=-12.202;QD=69.93;ReadPosRankSum=1.911;VQSLOD=6.3905;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,172,3892	0/0:1,0:1:3.01:0,3,70	0/0:25,0:26:72.24:0,72,1490	0/0:26,0:26:72.14:0,72,1360	1/1:2,15:22:24.04:712,24,0	1/1:2,8:10:30.10:941,30,0	1/1:4,16:25:42.10:1280,42,0	1/1:4,19:28:84.24:2216,84,0	1/1:0,17:18:51.18:1685,51,0	1/1:4,19:26:69.14:1878,69,0	1/1:1,12:16:33.11:965,33,0	1/1:2,36:42:99:3369,105,0	1/1:2,22:28:66.23:2123,66,0	1/1:2,20:23:57.19:1772,57,0	0/0:26,0:26:75.24:0,75,1683	1/1:0,21:21:54.19:1795,54,0	0/0:50,0:50:99:0,151,3374	1/1:1,20:22:51.18:1698,51,0	1/1:5,14:23:63.19:1629,63,0	1/1:6,11:18:36.12:951,36,0	1/1:5,40:56:96.29:3070,96,0	1/1:0,16:17:42.14:1394,42,0	1/1:2,12:17:35.96:1155,36,0	1/1:1,25:28:57.20:1895,57,0	1/1:2,14:20:51.17:1586,51,0	1/1:3,16:23:69.10:1747,69,0	1/1:4,16:21:60.21:1857,60,0	1/1:0,7:10:9.03:298,9,0
chr10	91123752	.	AC	A	17431.97	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=13.145;DP=648;FS=0.744;HRun=3;HaplotypeScore=83.4751;InbreedingCoeff=0.9222;MQ=66.37;MQ0=0;MQRankSum=-2.343;QD=33.78;ReadPosRankSum=0.579;VQSLOD=5.1864;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,129,1814	0/0:8,0:8:24.08:0,24,346	0/1:7,0:7:3.02:3,0,120	0/0:8,0:8:15.01:0,15,169	1/1:0,13:13:36.11:446,36,0	1/1:0,17:17:42.13:521,42,0	1/1:0,34:34:93.29:1153,93,0	1/1:0,26:26:75.19:901,75,0	1/1:0,16:16:42.13:521,42,0	1/1:2,21:23:63.17:765,63,0	1/1:0,16:16:45.14:558,45,0	1/1:0,32:32:90.28:1115,90,0	1/1:0,22:22:60.19:743,60,0	1/1:1,22:23:60.19:742,60,0	0/0:28,0:28:84.28:0,84,1207	1/1:3,29:32:84.26:1041,84,0	0/0:40,0:40:99:0,120,1709	1/1:0,26:26:78.25:967,78,0	1/1:2,16:18:45.14:550,45,0	1/1:1,22:23:60.19:741,60,0	1/1:0,36:36:96.30:1190,96,0	1/1:1,19:20:57.18:702,57,0	1/1:0,17:17:51.16:632,51,0	1/1:0,25:25:69.22:855,69,0	1/1:0,24:24:72.23:893,72,0	1/1:0,23:23:69.21:844,69,0	1/1:0,28:28:84.25:1030,84,0	1/1:1,14:15:42.13:521,42,0
chr10	91125419	.	TAC	T	8944.99	PASS	AB=0.560;AC=43;AF=0.768;AN=56;BaseQRankSum=12.726;DP=794;FS=1.674;HRun=0;HaplotypeScore=128.2803;InbreedingCoeff=0.8991;MQ=64.67;MQ0=11;MQRankSum=-1.302;QD=16.38;ReadPosRankSum=4.301;VQSLOD=4.8829;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:40:90.28:0,90,1390	0/0:16,1:17:9.68:0,10,567	0/0:70,0:39:53.27:0,53,825	0/0:59,1:32:35.94:0,36,498	1/1:7,13:21:41.34:474,41,0	1/1:9,0:33:53.93:264,54,0	1/1:5,0:30:43.41:209,43,0	1/1:15,17:32:51.14:600,51,0	1/1:8,19:27:48.15:575,48,0	1/1:6,0:24:45.59:254,46,0	1/1:3,0:20:38.96:187,39,0	1/1:4,30:34:66.16:788,66,0	1/1:2,0:16:31.25:153,31,0	1/1:6,17:23:45.14:539,45,0	0/0:32,0:32:54.53:0,55,1170	1/1:1,1:19:35.14:191,35,0	0/0:26,1:27:32.97:0,33,949	1/1:10,1:34:46.16:287,46,0	1/1:5,13:17:38.74:422,39,0	1/1:4,14:18:42.13:504,42,0	0/1:13,47:61:9.04:1321,0,9	1/1:4,0:15:24.44:116,24,0	1/1:0,0:17:37:173,37,0	1/1:4,0:27:54.45:266,54,0	1/1:3,0:17:36.93:181,37,0	1/1:5,20:26:56.96:635,57,0	1/1:6,15:22:44.97:517,45,0	1/1:3,9:12:24.07:288,24,0
chr10	91126646	.	A	AAGGG	11199.67	PASS	AB=0.667;AC=43;AF=0.768;AN=56;BaseQRankSum=-7.125;DP=432;FS=0.565;HRun=0;HaplotypeScore=68.3959;InbreedingCoeff=0.7412;MQ=75.63;MQ0=1;MQRankSum=-0.757;QD=34.25;ReadPosRankSum=0.284;VQSLOD=4.6816;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:72.22:0,72,1117	0/0:4,0:4:3.01:0,3,49	0/0:12,0:8:2.99:0,3,23	0/0:20,0:19:21.68:0,22,298	1/1:5,2:7:11.91:240,12,0	1/1:10,10:20:33.07:751,33,0	1/1:10,11:21:30.10:732,30,0	1/1:10,2:12:9.02:170,9,0	1/1:10,10:23:30.06:676,30,0	1/1:8,6:14:24.08:543,24,0	1/1:3,3:6:6.02:144,6,0	1/1:8,14:23:33.11:769,33,0	1/1:4,9:13:21.03:459,21,0	0/1:8,7:16:22.05:551,0,22	0/0:20,0:20:39.13:0,39,636	1/1:4,8:12:15.05:366,15,0	0/0:16,0:16:33.11:0,33,540	1/1:0,5:5:15.05:366,15,0	1/1:6,7:13:21.07:467,21,0	1/1:5,6:11:12.04:293,12,0	1/1:16,21:39:52.89:1248,53,0	1/1:5,10:15:18.06:418,18,0	1/1:2,6:10:17.50:419,18,0	1/1:8,9:18:24.08:585,24,0	1/1:7,4:11:6.02:146,6,0	1/1:7,13:21:45.10:980,45,0	1/1:2,13:15:30.10:730,30,0	1/1:0,2:2:6.02:146,6,0
chr10	91127855	.	GAAA	G	4419.79	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=2.583;DP=442;FS=9.672;HRun=15;HaplotypeScore=66.0978;InbreedingCoeff=0.7586;MQ=52.68;MQ0=24;MQRankSum=-2.197;QD=14.30;ReadPosRankSum=5.816;VQSLOD=2.2554;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:83.88:0,84,1116	0/0:2,0:3:6.02:0,6,98	0/0:13,0:1:3.01:0,3,42	0/0:17,0:7:9.03:0,9,131	0/0:4,6:9:2.13:0,2,5	1/1:7,5:18:8.76:141,9,0	1/1:4,14:22:33.96:426,34,0	1/1:3,14:19:32.71:337,33,0	1/1:3,5:8:11.95:135,12,0	1/1:10,8:15:13.53:138,14,0	1/1:5,5:10:8.10:86,8,0	1/1:3,9:11:18.04:202,18,0	1/1:3,9:12:17.99:202,18,0	1/1:5,7:12:11.96:135,12,0	0/0:19,0:19:42.06:0,42,660	1/1:3,5:8:14.94:168,15,0	0/0:33,0:34:60.18:0,60,1025	1/1:3,23:26:53.75:577,54,0	1/1:10,2:12:20.87:193,21,0	1/1:3,4:7:2.43:33,2,0	1/1:9,12:23:20.87:248,21,0	1/1:5,6:12:6.76:97,7,0	1/1:1,6:7:8.35:100,8,0	1/1:5,15:20:32.38:353,32,0	1/1:3,4:7:1.22:31,1,0	1/1:7,8:17:25.26:250,25,0	1/1:3,7:10:17.99:202,18,0	1/1:6,13:18:31.48:367,31,0
chr10	91128020	.	CAG	C	318.14	PASS	AB=0.890;AC=8;AF=0.143;AN=56;BaseQRankSum=1.432;DP=641;FS=8.710;HRun=0;HaplotypeScore=167.8468;InbreedingCoeff=-0.1663;MQ=49.64;MQ0=34;MQRankSum=1.285;QD=1.70;ReadPosRankSum=-4.179;VQSLOD=-0.0291;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.25:0,72,1329	0/0:9,0:9:27.07:0,27,425	0/0:43,0:13:35.19:0,35,534	0/0:35,0:14:36.12:0,36,663	0/0:13,0:12:27.08:0,27,454	0/0:17,0:17:20.62:0,21,193	0/1:35,3:37:99:123,0,501	0/0:31,0:28:78.24:0,78,1246	0/0:29,0:29:75.19:0,75,1204	0/1:18,1:19:84.49:84,0,238	0/0:5,0:4:5.95:0,6,76	0/0:24,0:23:60.20:0,60,998	0/1:15,0:15:22.11:22,0,171	0/0:29,0:29:60.20:0,60,967	0/0:17,0:17:39.56:0,40,713	0/0:10,2:8:20.83:0,21,180	0/0:35,0:34:93.09:0,93,1674	0/1:23,2:24:39.24:39,0,487	0/0:20,0:20:54.14:0,54,845	0/0:7,0:7:11.07:0,11,156	0/0:59,0:58:99:0,127,2216	0/1:12,1:13:1.53:2,0,132	0/1:4,2:6:28.11:28,0,42	0/1:57,3:55:78.14:78,0,826	0/1:6,5:11:35.74:72,0,36	0/0:22,0:22:61.39:0,61,966	0/0:17,0:16:42.06:0,42,580	0/0:3,0:3:8.96:0,9,134
chr10	91128022	.	G	GAC	1681.63	PASS	AB=0.862;AC=15;AF=0.268;AN=56;BaseQRankSum=2.804;DP=647;FS=12.508;HRun=0;HaplotypeScore=169.6495;InbreedingCoeff=0.1138;MQ=49.45;MQ0=34;MQRankSum=-0.733;QD=6.59;ReadPosRankSum=1.644;VQSLOD=2.4802;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:63.10:0,63,877	0/0:9,0:9:21.07:0,21,291	0/0:41,0:11:26.79:0,27,302	0/0:34,0:13:32.69:0,33,419	0/0:13,0:12:23.94:0,24,264	0/1:10,8:19:26.96:27,0,33	0/1:36,6:41:54.14:247,0,54	0/0:31,0:28:77.25:0,77,787	0/0:29,0:29:48.56:0,49,696	0/1:19,0:19:23.49:102,0,23	0/1:4,2:5:14.75:18,0,15	0/1:25,0:24:4.49:4,0,456	0/1:15,0:15:44.47:44,0,89	0/0:29,0:29:15.36:0,15,515	0/0:17,0:17:39.13:0,39,552	1/1:8,4:8:8.18:112,8,0	0/0:35,0:34:93.26:0,93,1285	0/1:20,5:24:57.11:331,0,57	0/0:19,0:19:51.35:0,51,486	0/0:7,0:7:8.70:0,9,97	0/0:59,0:58:99:0,119,1386	0/1:9,6:15:20.87:35,0,21	1/1:6,1:7:2.60:41,3,0	1/1:41,19:55:11.99:788,12,0	0/1:9,1:10:8.44:92,0,8	0/0:21,0:21:44.35:0,44,519	0/0:16,0:15:2.72:0,3,227	0/0:3,0:3:8.96:0,9,95
chr10	91128026	.	GAC	G	42.85	PASS	AB=0.944;AC=6;AF=0.107;AN=56;BaseQRankSum=0.341;DP=639;FS=2.796;HRun=0;HaplotypeScore=168.0225;InbreedingCoeff=0.0481;MQ=49.06;MQ0=35;MQRankSum=1.519;QD=0.50;ReadPosRankSum=-3.695;VQSLOD=2.0268;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:39.05:0,39,538	0/1:5,2:7:53.31:53,0,123	0/0:39,0:9:6.02:0,6,85	0/0:35,0:13:6.01:0,6,65	0/0:14,0:13:22.52:0,23,167	0/0:20,0:20:12.01:0,12,139	0/1:41,0:40:22.33:22,0,228	0/0:32,0:29:12.76:0,13,83	0/0:25,1:26:51.01:0,51,345	0/1:18,0:18:24.89:43,0,25	0/0:6,0:5:5.99:0,6,67	0/0:24,1:24:8.11:0,8,268	0/0:15,0:15:11.05:0,11,123	0/0:25,1:26:8.07:0,8,243	0/0:17,0:17:16.01:0,16,363	0/0:12,0:8:8.99:0,9,76	0/0:31,3:33:6.88:0,7,984	0/0:26,0:25:15.16:0,15,405	0/0:20,0:19:11.87:0,12,103	0/0:8,0:8:13.13:0,13,82	0/0:59,1:59:8.36:0,8,407	0/0:15,0:15:8.08:0,8,61	1/1:7,0:7:2.98:22,3,0	0/0:63,0:58:32.96:0,33,650	0/1:12,0:12:19.34:19,0,78	0/0:17,0:17:29.33:0,29,262	0/0:12,0:11:10.79:0,11,82	0/0:4,0:4:11.94:0,12,108
chr10	91128028	.	C	CAG	2420.11	PASS	AB=0.947;AC=22;AF=0.393;AN=56;BaseQRankSum=3.366;DP=656;FS=8.629;HRun=0;HaplotypeScore=169.0770;InbreedingCoeff=-0.2902;MQ=48.23;MQ0=35;MQRankSum=0.460;QD=5.33;ReadPosRankSum=1.821;VQSLOD=2.2984;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:68.94:0,69,750	0/0:8,0:8:17.63:0,18,187	0/0:38,0:7:18:0,18,190	0/0:35,0:13:33.02:0,33,324	0/1:12,2:13:35.01:110,0,35	0/0:20,0:20:7.45:0,7,169	0/1:41,0:40:35.39:35,0,432	1/1:31,1:29:0.31:198,0,0	0/1:21,5:26:93.97:270,0,94	0/1:20,0:20:30.75:31,0,203	0/0:5,0:4:5.99:0,6,64	1/1:18,8:25:1.79:327,2,0	0/0:15,0:15:9.35:0,9,224	0/1:20,5:25:21.95:208,0,22	0/0:17,0:17:39.01:0,39,482	0/1:11,0:7:31.96:32,0,78	0/0:35,0:34:87.99:0,88,1185	0/1:27,0:26:91.38:91,0,324	1/1:19,2:20:4.74:133,5,0	0/1:8,3:11:31.87:34,0,32	0/1:64,2:65:84.65:565,0,85	0/1:15,0:15:24.99:25,0,81	0/1:9,0:9:12.15:12,0,58	0/1:65,0:60:99:225,0,473	0/1:13,0:13:22.46:22,0,59	0/1:17,0:17:18.15:161,0,18	0/1:9,2:10:3.72:92,0,4	0/1:4,0:4:7.27:7,0,41
chr10	91128567	.	A	AG	273.84	PASS	AB=0.945;AC=6;AF=0.107;AN=56;BaseQRankSum=-0.739;DP=477;FS=0.000;HRun=0;HaplotypeScore=93.7453;InbreedingCoeff=-0.1345;MQ=74.27;MQ0=2;MQRankSum=-0.466;QD=2.77;ReadPosRankSum=-2.256;VQSLOD=2.5747;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,100,1086	0/0:3,0:3:9.03:0,9,123	0/0:27,0:17:0.37:0,0,233	0/0:24,0:14:23.90:0,24,194	0/0:19,0:19:27.39:0,27,214	0/0:19,0:19:23.63:0,24,172	0/0:18,0:18:40.70:0,41,355	0/1:22,0:21:99:116,0,160	0/0:16,0:16:18.38:0,18,120	0/0:23,0:23:56.48:0,56,491	0/0:11,0:11:31.30:0,31,200	0/1:9,6:15:12.16:12,0,162	0/0:8,0:8:6.21:0,6,33	0/0:20,0:20:14.90:0,15,148	0/0:16,0:16:48.08:0,48,599	0/0:17,0:17:38.93:0,39,325	0/0:24,0:24:68.14:0,68,775	0/0:18,0:18:40.39:0,40,313	0/1:23,0:23:92.50:93,0,136	0/1:10,0:10:7.16:7,0,151	0/1:10,0:10:47.34:85,0,47	0/0:9,0:9:26.54:0,27,186	0/0:14,0:13:20.67:0,21,145	0/0:16,0:16:26.74:0,27,216	0/0:12,0:12:22.45:0,22,185	0/1:18,0:18:80.60:81,0,113	0/0:12,0:12:23.23:0,23,161	0/0:15,0:15:30.10:0,30,229
chr10	91128570	.	A	AAAG	5368.65	PASS	AB=0.979;AC=44;AF=0.786;AN=56;BaseQRankSum=4.017;DP=506;FS=15.995;HRun=0;HaplotypeScore=103.0443;InbreedingCoeff=0.6783;MQ=73.20;MQ0=2;MQRankSum=-3.659;QD=13.35;ReadPosRankSum=-1.677;VQSLOD=3.2816;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:95.80:0,96,1044	0/0:3,0:3:9.03:0,9,125	0/0:26,0:17:10.43:0,10,98	0/1:22,0:13:9.39:9,0,58	1/1:16,0:19:8.64:177,9,0	1/1:3,15:19:18.05:283,18,0	1/1:7,12:23:21.07:385,21,0	1/1:14,1:28:43.21:328,43,0	1/1:3,0:16:11.85:157,12,0	1/1:8,13:23:38.96:455,39,0	1/1:11,0:12:14.46:183,14,0	1/1:17,0:17:15.01:169,15,0	1/1:2,6:8:3.01:50,3,0	1/1:6,2:23:17.78:228,18,0	0/0:16,0:16:36.10:0,36,471	1/1:6,7:19:27.56:402,28,0	0/0:23,0:23:56.76:0,57,686	1/1:6,14:21:27.09:510,27,0	1/1:5,1:30:72.67:690,73,0	0/1:11,0:11:1.06:50,0,1	1/1:11,0:11:23.89:199,24,0	1/1:5,5:10:13.36:146,13,0	1/1:11,0:11:2.97:57,3,0	1/1:7,9:17:21.03:363,21,0	1/1:6,7:13:7.58:120,8,0	1/1:4,1:17:29.38:252,29,0	1/1:7,0:14:6.02:78,6,0	1/1:7,0:14:6.02:78,6,0
chr10	91128573	.	G	GAAGAAG	6954.42	PASS	AB=0.920;AC=42;AF=0.750;AN=56;BaseQRankSum=2.208;DP=480;FS=11.144;HRun=0;HaplotypeScore=116.0682;InbreedingCoeff=0.5343;MQ=74.33;MQ0=2;MQRankSum=-6.173;QD=18.06;ReadPosRankSum=-2.714;VQSLOD=3.1666;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.30:0,96,1711	0/0:3,0:3:9.03:0,9,188	0/0:20,0:13:13.38:0,13,124	0/1:19,0:13:27.18:27,0,89	1/1:12,5:20:13.06:478,13,0	1/1:20,0:20:15.84:154,16,0	1/1:23,0:23:27.09:226,27,0	1/1:34,0:32:56.78:993,57,0	1/1:15,0:15:15.05:396,15,0	1/1:19,0:19:21.39:187,21,0	0/1:12,0:13:38.85:61,0,39	1/1:16,0:16:18.02:288,18,0	1/1:9,0:9:6.01:63,6,0	1/1:20,0:20:18.05:487,18,0	0/0:16,0:16:36.12:0,36,723	0/1:21,0:21:24.14:155,0,24	0/0:21,0:21:57.19:0,57,1081	1/1:20,0:20:28.26:167,28,0	1/1:29,0:29:73.28:1293,73,0	1/1:8,0:8:14.53:294,15,0	1/1:13,0:13:27.06:431,27,0	1/1:9,0:9:2.84:49,3,0	0/1:8,0:11:9.57:10,0,32	1/1:18,0:18:23.58:162,24,0	1/1:10,0:10:8.84:58,9,0	1/1:17,0:17:32.77:489,33,0	1/1:11,0:11:8.99:207,9,0	1/1:8,0:8:9.03:278,9,0
chr10	91131046	.	ATAG	A	17054.12	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=18.253;DP=1005;FS=5.951;HRun=0;HaplotypeScore=184.7015;InbreedingCoeff=1.0000;MQ=54.71;MQ0=9;MQRankSum=-0.657;QD=41.19;ReadPosRankSum=3.478;VQSLOD=5.6206;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:88.08:0,88,2024	0/0:20,0:20:60.21:0,60,1372	0/0:50,0:17:47.95:0,48,930	0/0:39,0:22:56.68:0,57,1056	1/1:1,24:25:57.20:1005,57,0	0/0:24,0:23:65.59:0,66,1451	0/0:27,0:27:78.74:0,79,1799	1/1:3,33:34:97.85:1542,98,0	1/1:0,46:45:99:2061,117,0	0/0:40,0:39:99:0,111,2512	0/0:21,0:21:57.20:0,57,1296	1/1:1,35:35:90.10:1585,90,0	0/0:43,0:43:99:0,123,2769	1/1:0,30:30:75.26:1321,75,0	0/0:60,0:60:99:0,181,4116	0/0:51,0:51:99:0,154,3457	0/0:21,0:21:60.18:0,60,1369	0/0:39,0:38:99:0,107,2473	1/1:2,16:15:45.15:747,45,0	1/1:0,33:33:57.20:1006,57,0	1/1:6,68:68:99:2540,145,0	0/0:36,0:36:99:0,102,2346	0/0:29,0:29:75.25:0,75,1765	0/0:32,0:32:87.30:0,87,2020	0/0:25,0:25:55.05:0,55,1418	1/1:3,53:55:91.54:2654,92,0	1/1:0,33:33:78.27:1376,78,0	1/1:0,27:27:69.24:1217,69,0
chr10	91131118	.	TAC	T	2064.23	PASS	AB=0.971;AC=14;AF=0.250;AN=56;BaseQRankSum=14.337;DP=752;FS=1.815;HRun=0;HaplotypeScore=178.0130;InbreedingCoeff=0.1893;MQ=59.34;MQ0=0;MQRankSum=1.215;QD=6.37;ReadPosRankSum=5.166;VQSLOD=2.8366;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:64.61:0,65,1186	0/0:15,0:15:29.49:0,29,689	0/0:25,0:18:35.70:0,36,575	0/0:32,0:25:49.16:0,49,627	1/1:20,1:21:15.93:166,16,0	0/0:19,1:20:51.16:0,51,947	0/0:25,0:25:72.19:0,72,1239	0/1:41,0:41:9.82:316,0,10	0/1:27,1:27:77.67:118,0,78	0/0:43,0:43:99:0,129,2198	0/0:15,0:15:22.98:0,23,678	1/1:30,1:30:5.11:266,5,0	0/0:27,0:27:81.21:0,81,1379	0/1:33,1:34:9.90:234,0,10	0/0:38,0:38:99:0,105,1677	0/0:25,0:25:60.94:0,61,1169	0/0:22,0:22:4.81:0,5,943	0/0:21,0:21:57.09:0,57,923	0/1:19,0:17:63.07:100,0,63	0/1:27,2:29:69.59:140,0,70	0/1:50,1:49:37.89:290,0,38	0/0:31,0:31:78.18:0,78,1362	0/0:13,0:13:30.08:0,30,484	0/0:30,0:30:78.23:0,78,1390	0/0:15,0:15:39.11:0,39,667	0/1:38,0:38:99:228,0,244	1/1:21,0:21:6.49:256,6,0	0/1:10,1:11:59.42:113,0,59
chr10	91131120	.	CAT	C	7320.48	PASS	AB=0.649;AC=21;AF=0.375;AN=56;BaseQRankSum=9.846;DP=766;FS=6.896;HRun=0;HaplotypeScore=164.9579;InbreedingCoeff=0.8619;MQ=59.05;MQ0=1;MQRankSum=-1.576;QD=23.09;ReadPosRankSum=1.108;VQSLOD=5.1979;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:61.42:0,61,1031	0/0:16,0:16:0.65:0,1,544	0/0:27,0:17:23.08:0,23,368	0/0:33,0:24:16.83:0,17,414	1/1:11,10:21:41.98:527,42,0	0/0:19,0:19:51.15:0,51,839	0/0:25,0:25:60.20:0,60,1012	1/1:4,33:37:99:1244,99,0	1/1:9,19:27:35.40:436,35,0	0/0:43,0:43:99:0,111,1866	0/0:15,1:16:3.13:0,3,595	1/1:10,21:30:57.04:684,57,0	0/0:28,0:28:69.24:0,69,1143	1/1:9,24:33:71.53:856,72,0	0/0:41,1:42:93.24:0,93,1408	0/0:24,1:25:18.18:0,18,864	0/0:23,0:23:37.81:0,38,833	0/0:23,0:23:48.13:0,48,750	1/1:7,11:16:33.11:428,33,0	1/1:10,20:30:41.26:544,41,0	1/1:17,32:47:69.20:879,69,0	0/0:33,0:33:69.22:0,69,1127	0/0:13,0:13:27.05:0,27,400	0/0:37,0:37:87.19:0,87,1289	0/0:16,0:16:32.90:0,33,516	0/1:17,20:37:26.78:814,0,27	1/1:3,19:22:50.97:641,51,0	1/1:5,6:11:21.07:269,21,0
chr10	91131149	.	ATGTGTG	A	1972.67	PASS	AB=0.780;AC=19;AF=0.365;AN=52;BaseQRankSum=4.092;DP=848;FS=13.684;HRun=0;HaplotypeScore=227.1604;InbreedingCoeff=0.7698;MQ=50.27;MQ0=25;MQRankSum=-5.887;QD=7.68;ReadPosRankSum=-0.125;VQSLOD=1.4247;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,1:47:23.36:0,23,1630	0/0:10,0:10:9.50:0,9,188	./.	./.	1/1:9,6:16:5.90:65,6,0	0/0:24,0:24:24.02:0,24,546	0/0:25,0:25:15.52:0,16,351	0/0:33,0:31:5.93:0,6,44	1/1:13,12:25:11.20:206,11,0	0/0:38,0:37:46.71:0,47,1049	0/0:19,0:19:21.07:0,21,492	1/1:17,12:28:21:408,21,0	0/0:27,0:27:42.13:0,42,913	1/1:19,4:23:7.35:125,7,0	0/0:31,0:32:66.22:0,66,1691	0/0:21,0:22:45.15:0,45,1005	0/0:30,0:29:64.81:0,65,1627	0/0:21,0:21:39.13:0,39,954	1/1:12,1:11:3.01:61,3,0	1/1:19,9:30:8.56:171,9,0	1/1:48,1:47:6.01:88,6,0	0/0:31,0:31:48.16:0,48,1293	0/0:18,0:18:33.58:0,34,810	0/0:41,0:41:83.65:0,84,1952	0/0:19,0:19:30.10:0,30,705	0/1:28,7:36:12.32:731,0,12	1/1:12,6:17:6.02:123,6,0	1/1:8,2:10:8.63:180,9,0
chr10	91131190	.	TGG	T	2329.45	PASS	AB=0.974;AC=12;AF=0.214;AN=56;BaseQRankSum=-6.707;DP=684;FS=12.025;HRun=2;HaplotypeScore=156.4684;InbreedingCoeff=-0.0067;MQ=63.71;MQ0=7;MQRankSum=1.867;QD=8.96;ReadPosRankSum=3.002;VQSLOD=-0.5364;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:70.76:0,71,964	0/0:9,0:9:9.92:0,10,196	0/0:30,0:17:44.12:0,44,453	0/0:35,0:21:49.25:0,49,546	0/0:17,0:17:21.64:0,22,164	0/1:16,0:17:16.16:105,0,16	0/1:18,0:18:2.66:180,0,3	0/0:31,0:29:77.58:0,78,676	0/0:27,0:24:54.31:0,54,376	0/1:20,0:21:20.20:207,0,20	0/1:12,0:12:17.86:97,0,18	0/0:31,0:31:67.60:0,68,468	0/1:18,3:21:43.85:380,0,44	0/0:17,0:16:36.13:0,36,260	0/0:31,0:31:76.37:0,76,1238	0/1:24,0:24:29.11:321,0,29	0/0:32,0:32:94.63:0,95,1250	0/1:21,0:21:58.99:123,0,59	0/0:12,0:10:28.99:0,29,237	0/0:22,0:22:28.76:0,29,216	0/0:38,0:37:65.01:0,65,508	0/1:31,1:32:99:310,0,153	0/1:22,0:22:49.61:165,0,50	0/1:48,0:46:99:264,0,206	1/1:22,0:24:13.51:332,14,0	0/0:30,0:29:73.53:0,74,522	0/0:11,0:10:19.44:0,19,128	0/0:7,0:7:18.98:0,19,128
chr10	91132000	.	G	GACACAC	21208.13	PASS	AB=0.934;AC=43;AF=0.768;AN=56;BaseQRankSum=1.654;DP=717;FS=14.537;HRun=0;HaplotypeScore=281.5221;InbreedingCoeff=0.8581;MQ=46.33;MQ0=1;MQRankSum=-11.868;QD=38.63;ReadPosRankSum=-0.507;VQSLOD=3.2878;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,120,2430	0/0:13,0:13:39.12:0,39,839	0/0:29,0:20:58.89:0,59,1004	0/0:23,0:20:12.25:0,12,630	1/1:15,10:25:13.78:407,14,0	1/1:11,10:21:27.56:879,28,0	1/1:19,8:27:30.06:857,30,0	1/1:14,1:15:27.04:427,27,0	1/1:9,12:22:42.13:1321,42,0	1/1:20,18:37:86.57:2509,87,0	1/1:4,17:21:7.18:211,7,0	1/1:15,11:25:36.02:1080,36,0	1/1:7,8:14:33.11:1027,33,0	1/1:17,9:26:51.14:1318,51,0	0/0:21,0:21:63.18:0,63,1320	1/1:9,15:24:57.16:1664,57,0	0/0:34,0:34:75.19:0,75,1818	1/1:3,14:18:15.05:505,15,0	1/1:7,2:7:18.02:460,18,0	1/1:12,16:30:45.78:1380,46,0	0/1:53,4:53:35.80:522,0,36	1/1:13,17:28:38.94:1169,39,0	1/1:8,9:17:23.88:745,24,0	1/1:6,38:44:8.69:314,9,0	1/1:10,13:24:47.32:1339,47,0	1/1:19,11:25:63.17:1649,63,0	1/1:7,6:11:21.07:512,21,0	1/1:1,14:15:27.56:914,28,0
chr10	91132036	.	G	GAC	5900.05	PASS	AB=0.745;AC=21;AF=0.375;AN=56;BaseQRankSum=-2.109;DP=828;FS=11.146;HRun=0;HaplotypeScore=317.0389;InbreedingCoeff=0.7576;MQ=49.64;MQ0=11;MQRankSum=-5.666;QD=18.97;ReadPosRankSum=-2.046;VQSLOD=3.6596;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,108,915	0/0:14,0:14:34.34:0,34,247	0/0:39,0:14:25.63:0,26,169	0/0:40,0:14:4.11:0,4,93	0/0:21,0:21:13.43:0,13,56	1/1:6,10:16:24.08:391,24,0	0/1:11,22:33:3.01:726,0,3	0/0:31,0:31:41.06:0,41,183	0/0:27,0:27:37.49:0,37,155	1/1:17,27:42:97.55:1446,98,0	1/1:7,12:20:12.04:191,12,0	0/0:22,0:21:35.37:0,35,138	1/1:7,15:22:37.98:571,38,0	0/0:23,0:21:31.80:0,32,130	0/0:36,0:36:89.78:0,90,645	1/1:7,20:27:24.30:652,24,0	0/0:30,0:30:67.41:0,67,478	1/1:7,12:19:38.59:608,39,0	0/1:15,0:15:24.25:31,0,24	0/0:31,0:31:32.10:0,32,132	0/0:86,0:79:41.54:0,42,178	1/1:13,20:32:30.10:488,30,0	1/1:7,11:18:18.06:290,18,0	1/1:16,19:35:12.02:197,12,0	0/1:12,16:28:31.61:310,0,32	0/0:34,0:31:12.04:0,12,195	0/0:17,0:16:33.46:0,33,131	0/0:10,0:10:15.80:0,16,61
chr10	91132039	.	ACG	A	7714.57	PASS	AB=0.979;AC=31;AF=0.554;AN=56;BaseQRankSum=-8.936;DP=843;FS=0.749;HRun=0;HaplotypeScore=301.7607;InbreedingCoeff=0.3233;MQ=48.82;MQ0=12;MQRankSum=-1.510;QD=12.69;ReadPosRankSum=-7.058;VQSLOD=2.5276;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:64.69:0,65,995	0/1:13,1:14:53.30:53,0,222	0/1:38,0:12:6.94:7,0,121	0/1:44,0:14:65.95:119,0,66	1/1:5,17:22:17.97:246,18,0	0/1:15,0:15:2.47:2,0,39	0/1:35,0:35:18.24:18,0,105	1/1:21,16:37:87.23:1192,87,0	1/1:2,25:27:42.13:638,42,0	0/1:47,0:45:19.98:158,0,20	0/0:20,0:20:9.62:0,10,34	1/1:7,18:24:45.15:682,45,0	0/1:23,1:23:26.57:115,0,27	1/1:7,17:22:36.12:547,36,0	0/0:34,0:34:48.92:0,49,705	0/0:27,0:27:27.21:0,27,105	0/1:27,2:29:63.83:64,0,434	0/0:18,0:18:1.82:0,2,43	1/1:10,5:13:26.61:328,27,0	1/1:5,27:32:39.09:595,39,0	1/1:15,72:80:36.11:647,36,0	0/1:32,0:31:18.13:27,0,18	0/0:18,0:18:10.93:0,11,35	0/0:34,0:34:3.54:0,4,8	0/0:27,0:27:17.69:0,18,97	1/1:9,26:33:96.17:1337,96,0	1/1:4,14:17:45.15:668,45,0	1/1:2,5:7:18.06:271,18,0
chr10	91132099	.	GAC	G	7573.45	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=0.510;DP=964;FS=3.368;HRun=0;HaplotypeScore=256.9120;InbreedingCoeff=0.9844;MQ=51.77;MQ0=32;MQRankSum=2.895;QD=20.41;ReadPosRankSum=0.629;VQSLOD=4.3924;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:64:99:0,156,2388	0/0:8,0:8:21.01:0,21,270	0/0:47,0:12:16.95:0,17,192	0/0:72,0:24:9.51:0,10,111	0/0:15,0:15:15:0,15,242	1/1:7,16:23:36.41:433,36,0	1/1:16,23:39:62.81:745,63,0	0/0:48,0:42:78.20:0,78,1194	0/0:34,0:32:39.12:0,39,619	1/1:23,23:44:99:1221,104,0	1/1:8,10:18:29.82:341,30,0	0/0:24,1:24:31.55:0,32,535	1/1:9,25:34:78.23:967,78,0	0/0:30,0:27:35.59:0,36,548	0/0:27,0:27:57.15:0,57,892	1/1:11,20:31:57.05:665,57,0	0/0:32,0:32:89.75:0,90,1397	1/1:17,12:29:35.45:538,35,0	0/0:20,0:16:38.82:0,39,509	0/0:21,0:21:33.10:0,33,543	0/0:83,5:79:19.50:0,19,454	1/1:12,21:33:60.18:744,60,0	1/1:11,13:24:42.11:517,42,0	1/1:16,54:67:72.07:904,72,0	1/1:10,13:22:42.01:498,42,0	0/0:30,1:24:24.97:0,25,873	0/0:20,0:19:27.98:0,28,414	0/0:8,0:8:14.94:0,15,195
chr10	91132123	.	CCACACAGACACA	C	3031.80	PASS	AB=0.839;AC=12;AF=0.214;AN=56;BaseQRankSum=3.226;DP=1041;FS=0.522;HRun=0;HaplotypeScore=397.5656;InbreedingCoeff=-0.1065;MQ=44.33;MQ0=55;MQRankSum=-7.542;QD=8.59;ReadPosRankSum=-4.275;VQSLOD=0.5980;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:56:99:0,114,4972	0/0:10,0:9:21.07:0,21,1098	0/0:50,0:5:1.49:0,1,20	0/0:71,0:13:1.02:0,1,121	0/0:9,11:22:5:0,5,57	0/0:32,0:30:65.99:0,66,2452	0/0:54,0:53:90.24:0,90,3092	0/1:33,0:27:99:257,0,141	1/1:17,8:23:21.07:466,21,0	0/0:47,0:47:99:0,108,3854	0/1:25,0:27:25.67:26,0,1669	0/1:19,8:28:99:121,0,103	0/0:40,0:40:69.71:0,70,2762	0/1:15,15:29:99:467,0,153	0/0:25,0:25:47.92:0,48,1991	0/0:27,0:26:55.43:0,55,2307	0/0:40,0:40:99:0,101,4608	0/0:25,0:25:60.20:0,60,2440	0/1:18,7:17:77.84:521,0,78	0/1:20,4:24:85.30:104,0,85	0/1:85,0:69:48.83:49,0,154	0/0:37,0:38:62.07:0,62,2340	0/0:31,0:31:51.50:0,51,2279	0/0:67,0:63:49.49:0,49,2902	0/0:24,0:28:52.45:0,52,1826	0/1:32,6:30:99:705,0,394	0/1:12,8:21:99:267,0,120	0/1:3,4:8:32.51:203,0,33
chr10	91132156	.	AC	A	6297.15	PASS	AB=0.772;AC=22;AF=0.393;AN=56;BaseQRankSum=4.989;DP=1077;FS=38.882;HRun=1;HaplotypeScore=321.4177;InbreedingCoeff=-0.6515;MQ=43.06;MQ0=57;MQRankSum=-3.706;QD=7.51;ReadPosRankSum=-3.694;VQSLOD=0.3140;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:51:99:0,135,2094	0/0:12,0:12:36.12:0,36,575	0/0:49,0:5:12.03:0,12,141	0/0:57,0:8:14.66:0,15,148	0/1:21,11:31:76.64:104,0,77	0/1:28,8:30:99:153,0,864	0/1:47,9:52:99:204,0,1199	0/1:38,36:65:99:1230,0,981	0/1:14,7:21:99:139,0,174	0/1:45,21:64:99:653,0,1601	0/1:25,8:30:97.58:98,0,482	0/1:14,7:21:99:142,0,222	0/1:23,14:34:99:229,0,574	0/1:19,9:27:99:190,0,235	0/0:27,0:27:75.22:0,75,1175	0/1:20,14:32:99:430,0,625	0/0:41,0:41:99:0,116,1799	0/1:20,6:24:99:149,0,579	0/1:22,8:27:99:263,0,625	0/1:26,7:29:99:160,0,462	0/1:52,21:56:99:369,0,217	0/1:29,12:38:99:280,0,672	0/1:23,5:25:99:125,0,645	0/1:48,12:57:99:207,0,560	0/1:25,8:31:99:188,0,615	0/1:27,18:38:99:597,0,714	0/1:12,12:22:99:325,0,238	0/1:5,2:7:62.77:63,0,189
chr10	91132197	.	GAC	G	3603.23	PASS	AB=0.870;AC=38;AF=0.679;AN=56;BaseQRankSum=9.953;DP=708;FS=27.527;HRun=0;HaplotypeScore=252.8227;InbreedingCoeff=0.2998;MQ=39.06;MQ0=34;MQRankSum=-6.204;QD=6.65;ReadPosRankSum=1.874;VQSLOD=1.8409;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,1:53:99:0,99,1445	0/0:16,0:14:33.04:0,33,435	0/1:13,0:2:5.85:6,0,37	0/0:29,0:4:2.50:0,2,9	1/1:14,8:18:10.38:102,10,0	1/1:20,1:21:20.92:196,21,0	1/1:26,4:30:23.49:204,23,0	0/1:41,7:35:11.67:214,0,12	1/1:8,10:18:30.81:278,31,0	1/1:31,1:29:27.24:303,27,0	1/1:14,1:15:6.82:44,7,0	1/1:11,3:14:5.44:60,5,0	1/1:16,6:21:24.77:276,25,0	1/1:13,4:17:13.07:106,13,0	0/0:30,0:30:38.20:0,38,850	1/1:27,3:31:12.75:230,13,0	0/0:36,1:36:42.56:0,43,1134	0/1:20,0:18:14.83:130,0,15	0/1:17,2:15:6.89:70,0,7	1/1:11,7:18:14.95:149,15,0	0/1:40,6:42:8.49:165,0,8	1/1:22,1:19:6.96:97,7,0	1/1:11,1:11:10.47:73,10,0	1/1:43,1:42:37.26:299,37,0	0/1:23,1:22:12.33:113,0,12	0/1:22,9:22:9.02:328,0,9	0/1:6,9:15:6.64:127,0,7	1/1:4,1:4:3.01:32,3,0
chr10	91132199	.	C	CTT	728.40	PASS	AB=0.980;AC=17;AF=0.304;AN=56;BaseQRankSum=12.059;DP=711;FS=3.906;HRun=0;HaplotypeScore=260.4022;InbreedingCoeff=-0.3454;MQ=38.66;MQ0=35;MQRankSum=-10.314;QD=2.21;ReadPosRankSum=-8.204;VQSLOD=0.4689;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:51:99:0,120,1899	0/0:15,0:13:39.13:0,39,620	0/0:18,0:4:3.90:0,4,50	0/0:33,0:4:6.02:0,6,82	0/1:22,0:19:49.14:49,0,54	0/1:21,1:21:73.90:74,0,74	0/1:27,1:28:99:131,0,141	0/0:46,0:33:75.06:0,75,893	0/1:19,1:20:84.58:85,0,219	0/1:31,0:28:33.06:33,0,401	1/1:14,1:15:1.12:86,1,0	0/1:15,0:15:26.03:26,0,82	0/0:22,0:21:5.33:0,5,325	0/1:16,0:16:99:111,0,126	0/0:31,0:31:87.26:0,87,1323	0/1:29,2:31:62.69:63,0,194	0/0:36,0:35:96.28:0,96,1492	0/1:20,0:18:7.82:8,0,180	0/1:18,1:15:10.58:11,0,411	0/1:18,0:18:36.91:37,0,139	0/0:44,1:42:13.87:0,14,180	0/1:21,0:18:71.94:72,0,151	0/1:13,1:11:25.25:25,0,29	0/0:40,3:42:36.27:0,36,230	0/1:23,0:21:52.36:52,0,146	0/0:31,0:22:22.08:0,22,544	0/1:15,0:14:22.37:22,0,234	0/0:8,0:7:14.83:0,15,122
chr10	91132209	.	C	CAG	4113.33	PASS	AB=0.975;AC=34;AF=0.607;AN=56;BaseQRankSum=9.105;DP=702;FS=13.743;HRun=0;HaplotypeScore=235.6826;InbreedingCoeff=0.1778;MQ=38.50;MQ0=44;MQRankSum=-3.278;QD=7.47;ReadPosRankSum=-1.522;VQSLOD=1.9104;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:50:99:0,114,1568	0/0:16,0:14:42.04:0,42,522	0/0:23,0:4:6.88:0,7,67	0/1:37,0:5:0.89:5,0,1	0/1:22,0:18:28.80:51,0,29	1/1:18,5:22:23.02:213,23,0	1/1:22,6:28:30.66:252,31,0	0/1:38,0:24:83.70:94,0,84	0/1:20,0:20:51.23:62,0,51	1/1:23,5:26:25.16:350,25,0	1/1:9,5:14:13.50:146,14,0	0/1:13,0:13:14.67:36,0,15	1/1:23,7:28:52.01:537,52,0	0/1:14,0:14:5.63:40,0,6	0/0:29,0:29:75.02:0,75,1003	1/1:20,13:33:61.54:697,62,0	0/0:32,0:31:90.08:0,90,1237	0/1:14,8:20:22.29:219,0,22	0/1:13,0:7:5.52:6,0,25	1/1:15,0:14:10.30:41,10,0	0/1:45,0:42:22.83:57,0,23	1/1:18,6:21:22.25:174,22,0	1/1:9,2:8:12.84:136,13,0	1/1:38,11:47:43.16:552,43,0	1/1:14,2:14:13.17:233,13,0	0/1:26,1:18:27.45:155,0,27	0/1:17,0:16:38.84:54,0,39	0/1:12,0:11:1.93:2,0,58
chr10	91132213	.	GACACACAC	G	5803.25	PASS	AB=0.977;AC=30;AF=0.536;AN=56;BaseQRankSum=1.750;DP=719;FS=14.243;HRun=0;HaplotypeScore=267.9776;InbreedingCoeff=-0.0826;MQ=40.07;MQ0=47;MQRankSum=-4.164;QD=11.18;ReadPosRankSum=-8.041;VQSLOD=0.8906;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,101,2884	0/0:14,0:12:33.11:0,33,950	0/0:29,0:5:2.48:0,2,123	0/0:45,0:6:5.85:0,6,72	1/1:18,7:21:28.56:340,29,0	0/1:23,0:22:99:137,0,179	0/1:28,0:28:99:220,0,109	0/1:31,0:19:33.12:33,0,34	1/1:18,6:23:46.34:699,46,0	0/1:30,0:28:99:263,0,344	0/1:14,0:14:43.10:55,0,43	1/1:14,1:15:23.90:264,24,0	0/1:30,0:28:99:201,0,330	1/1:14,3:17:7.62:329,8,0	0/0:25,0:28:57.13:0,57,2116	0/1:30,1:31:99:271,0,502	0/0:31,0:30:78.22:0,78,2441	0/1:22,0:20:99:169,0,135	0/1:12,2:8:69.07:175,0,69	1/1:13,3:15:14.48:252,14,0	1/1:40,1:38:3.30:125,3,0	0/1:24,0:21:99:157,0,106	0/1:11,0:8:47.90:48,0,58	0/1:47,0:45:70:382,0,70	0/1:18,0:16:31.37:186,0,31	0/1:20,5:17:99:557,0,135	1/1:17,4:21:40.63:554,41,0	1/1:11,1:11:27.93:387,28,0
chr10	91132221	.	C	CACAG	8711.74	PASS	AB=0.989;AC=40;AF=0.714;AN=56;BaseQRankSum=4.021;DP=727;FS=5.832;HRun=0;HaplotypeScore=212.2393;InbreedingCoeff=0.5571;MQ=40.13;MQ0=56;MQRankSum=-2.736;QD=17.22;ReadPosRankSum=-4.229;VQSLOD=3.3211;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:51:99:0,120,1757	0/0:13,0:11:33.09:0,33,556	0/0:44,0:5:4.89:0,5,112	0/0:54,0:6:0.94:0,1,21	1/1:25,0:21:25.28:210,25,0	1/1:22,1:22:30.78:474,31,0	1/1:24,0:24:38.52:526,39,0	0/1:28,0:15:5.91:6,0,57	1/1:24,0:23:37.22:358,37,0	1/1:31,0:29:40.83:773,41,0	1/1:16,0:16:23.39:314,23,0	1/1:19,0:19:24.63:295,25,0	1/1:21,0:19:41.67:672,42,0	1/1:17,0:17:20.14:220,20,0	0/0:29,0:29:64.81:0,65,1115	1/1:31,0:31:65.17:1083,65,0	0/0:29,0:28:75.21:0,75,1293	0/1:20,1:19:12.96:457,0,13	0/1:14,0:9:31.16:122,0,31	1/1:17,0:16:17.95:125,18,0	1/1:39,0:36:0.43:108,0,0	1/1:26,0:23:30.04:454,30,0	1/1:10,1:8:8.84:143,9,0	1/1:43,5:47:54.13:954,54,0	1/1:16,0:14:30.07:516,30,0	0/1:22,0:14:73.36:205,0,73	1/1:18,0:18:31.66:430,32,0	1/1:13,0:12:18.33:266,18,0
chr10	91132583	.	A	AAGGT	4626.98	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-0.664;DP=602;FS=4.043;HRun=0;HaplotypeScore=138.8061;InbreedingCoeff=0.8494;MQ=69.92;MQ0=9;MQRankSum=-1.954;QD=20.75;ReadPosRankSum=0.422;VQSLOD=4.6736;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,100,1683	0/0:9,0:9:21.52:0,22,327	0/0:45,0:28:68.85:0,69,939	0/0:49,0:31:77.04:0,77,1142	1/1:10,0:9:17.98:312,18,0	0/0:18,0:17:39.59:0,40,580	0/0:32,0:32:54.18:0,54,829	1/1:24,0:24:48.16:847,48,0	1/1:25,0:24:9.03:181,9,0	0/0:11,0:11:33.07:0,33,501	0/0:8,0:8:6.02:0,6,92	1/1:21,0:21:9.03:164,9,0	0/0:18,0:18:40.12:0,40,626	1/1:15,1:15:27.09:443,27,0	0/0:29,0:29:78.09:0,78,1281	0/0:21,0:21:44.37:0,44,745	0/0:31,0:30:84.21:0,84,1299	0/0:12,0:12:32.70:0,33,472	1/1:18,0:17:19.17:592,19,0	1/1:8,0:8:6.02:91,6,0	1/1:36,0:35:45.62:680,46,0	0/0:10,0:10:12.04:0,12,179	0/0:9,0:9:12.03:0,12,170	0/0:22,0:22:35.81:0,36,548	0/0:11,0:11:9.03:0,9,130	0/1:21,0:18:4.72:629,0,5	1/1:24,3:28:27.23:609,27,0	1/1:3,13:16:3.01:80,3,0
chr10	91132585	.	G	GGTAGGT	5370.08	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=1.866;DP=643;FS=1.835;HRun=0;HaplotypeScore=177.9581;InbreedingCoeff=0.8921;MQ=65.78;MQ0=10;MQRankSum=-5.118;QD=21.14;ReadPosRankSum=-2.472;VQSLOD=4.2239;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:46:99:0,110,2039	0/0:10,0:10:21.25:0,21,375	0/0:43,0:25:59.33:0,59,856	0/0:49,0:29:65.23:0,65,1109	1/1:12,0:11:17.86:364,18,0	0/0:20,0:19:37.74:0,38,555	0/0:30,0:30:56.55:0,57,840	1/1:25,0:25:54.97:910,55,0	1/1:8,17:26:11.52:302,12,0	0/0:14,0:14:31.25:0,31,504	0/0:9,0:9:6.02:0,6,92	1/1:9,16:26:10.48:147,10,0	0/0:21,0:21:15.48:0,15,603	1/1:19,1:20:33.70:497,34,0	0/0:25,0:28:66.36:0,66,1638	0/0:20,0:20:45.91:0,46,762	0/0:29,0:30:84.25:0,84,1530	0/0:12,0:12:19.46:0,19,473	1/1:22,0:21:51.76:759,52,0	1/1:11,0:10:7.27:94,7,0	1/1:41,0:40:48.11:708,48,0	0/0:8,0:8:12.04:0,12,179	0/0:12,0:12:12.04:0,12,178	0/0:25,0:25:35.86:0,36,565	0/0:11,0:11:9.03:0,9,124	1/1:24,0:21:3.78:747,4,0	1/1:9,17:28:27.25:774,27,0	1/1:17,0:17:3.01:69,3,0
chr10	91132587	.	T	TAG	4052.17	PASS	AB=0.903;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.147;DP=638;FS=3.855;HRun=0;HaplotypeScore=151.8817;InbreedingCoeff=0.3004;MQ=64.08;MQ0=13;MQRankSum=-4.315;QD=17.24;ReadPosRankSum=1.429;VQSLOD=3.7394;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,113,1680	0/0:10,0:10:24.53:0,25,348	0/0:44,0:24:68.34:0,68,930	0/0:53,0:28:77.06:0,77,1154	1/1:9,3:11:17.86:269,18,0	0/0:20,0:19:45.13:0,45,642	0/0:29,0:29:37.44:0,37,809	1/1:20,3:23:29.30:827,29,0	0/1:24,1:24:61.55:92,0,62	0/0:16,0:16:38.68:0,39,530	0/0:8,0:8:6.02:0,6,92	0/1:23,3:26:14.81:130,0,15	0/0:22,0:22:50.75:0,51,685	0/1:16,5:20:81.75:429,0,82	0/0:30,0:30:87.15:0,87,1254	0/0:20,0:20:38.07:0,38,748	0/0:33,0:32:86.24:0,86,1212	0/0:13,0:13:30.20:0,30,486	0/1:22,0:21:27.38:603,0,27	0/1:11,0:10:15.90:82,0,16	0/1:32,5:35:52.48:625,0,52	0/0:9,0:9:12.04:0,12,179	0/0:11,0:11:12.03:0,12,176	0/0:27,0:27:35.57:0,36,552	0/0:12,0:12:9.03:0,9,121	0/1:17,7:21:45.87:590,0,46	1/1:18,2:20:26.88:369,27,0	1/1:14,0:14:3.01:36,3,0
chr10	91132618	.	GTAAGTC	G	5082.63	PASS	AB=0.997;AC=33;AF=0.611;AN=54;BaseQRankSum=2.548;DP=600;FS=0.913;HRun=0;HaplotypeScore=165.7659;InbreedingCoeff=0.0860;MQ=60.55;MQ0=21;MQRankSum=-2.660;QD=10.81;ReadPosRankSum=-4.723;VQSLOD=2.6716;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:57.18:0,57,3467	0/0:8,0:8:20.43:0,20,653	0/1:47,1:18:76.99:77,0,923	0/1:73,0:25:33.48:33,0,936	1/1:12,0:12:16.86:233,17,0	1/1:21,1:21:1.35:575,1,0	1/1:24,1:25:12.49:170,12,0	1/1:19,0:19:46.74:656,47,0	0/1:18,0:18:62.59:286,0,63	1/1:16,0:16:36.07:566,36,0	./.	0/1:17,0:17:21.08:47,0,21	0/1:15,0:15:70.78:306,0,71	0/1:21,0:20:43.71:166,0,44	0/0:34,0:34:60.38:0,60,2860	1/1:16,1:17:10.95:139,11,0	0/0:29,0:28:68.35:0,68,1867	0/1:12,0:12:27.20:207,0,27	1/1:11,0:11:21.57:278,22,0	0/1:8,0:7:10.41:127,0,10	0/1:32,0:30:46.18:159,0,46	0/1:12,0:12:0:0,0,0	1/1:12,0:12:3.55:75,4,0	1/1:29,0:29:13.20:121,13,0	1/1:11,0:11:4.25:33,4,0	1/1:23,0:21:8.07:584,8,0	0/1:15,0:15:99:243,0,126	0/0:6,0:5:3.46:0,3,24
chr10	91132619	.	TAA	T	5770.45	PASS	AB=0.791;AC=43;AF=0.796;AN=54;BaseQRankSum=10.134;DP=573;FS=0.000;HRun=2;HaplotypeScore=133.4440;InbreedingCoeff=0.6319;MQ=61.45;MQ0=21;MQRankSum=-4.785;QD=12.85;ReadPosRankSum=-1.300;VQSLOD=1.2983;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,1:45:90.31:0,90,1995	0/0:8,0:8:20.97:0,21,392	0/1:47,2:19:76.81:77,0,586	0/1:67,6:26:41.40:41,0,625	1/1:8,3:11:18.01:235,18,0	1/1:14,8:21:43.04:535,43,0	1/1:1,23:24:23.87:350,24,0	1/1:4,13:17:43.31:525,43,0	1/1:12,6:18:28.24:300,28,0	1/1:10,4:14:39.02:534,39,0	./.	1/1:14,2:16:14.08:150,14,0	1/1:10,4:14:25.72:318,26,0	1/1:15,4:18:24.49:239,24,0	0/0:34,0:34:83.56:0,84,1695	1/1:1,16:17:23.78:295,24,0	0/0:26,2:27:22.84:0,23,1062	1/1:6,6:12:7.42:374,7,0	1/1:3,2:5:15.05:212,15,0	1/1:6,2:7:9.01:114,9,0	1/1:18,6:23:16.27:171,16,0	0/1:0,12:12:0:0,0,0	1/1:1,11:12:5.79:78,6,0	1/1:4,26:29:24.08:375,24,0	1/1:0,11:11:6.02:79,6,0	1/1:5,16:19:47.56:484,48,0	1/1:13,2:15:33.33:274,33,0	1/1:4,0:3:2.59:10,3,0
chr10	91132622	.	GTC	G	2166.01	PASS	AB=0.984;AC=33;AF=0.611;AN=54;BaseQRankSum=8.504;DP=581;FS=1.960;HRun=0;HaplotypeScore=146.6820;InbreedingCoeff=0.3567;MQ=61.98;MQ0=19;MQRankSum=-0.995;QD=6.69;ReadPosRankSum=-2.105;VQSLOD=3.0174;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,1:45:70.22:0,70,2230	0/0:8,0:8:20.98:0,21,401	0/0:54,0:21:22.79:0,23,758	0/0:74,0:28:0.52:0,1,822	1/1:9,0:9:14.44:99,14,0	0/1:21,1:21:2.96:239,0,3	1/1:23,1:24:23.61:181,24,0	1/1:19,1:20:5.46:228,5,0	0/1:19,0:19:9.71:106,0,10	1/1:13,0:13:18.82:239,19,0	./.	1/1:16,0:16:2.38:29,2,0	0/1:12,1:13:36.38:99,0,36	0/1:19,0:18:30.16:56,0,30	0/0:35,0:35:99:0,102,1910	1/1:15,2:17:20.81:159,21,0	0/0:28,0:28:72.48:0,72,1275	1/1:12,1:13:6.39:180,6,0	1/1:5,0:5:14.88:108,15,0	1/1:8,0:7:5.48:46,5,0	0/1:24,0:23:23.48:52,0,23	0/1:12,0:12:0:0,0,0	1/1:12,0:12:5.77:52,6,0	1/1:31,1:31:23.96:201,24,0	1/1:10,1:11:5.99:50,6,0	1/1:20,0:18:16:153,16,0	0/1:15,0:15:29.61:65,0,30	0/0:4,0:3:1.95:0,2,8
chr10	91132981	.	C	CAAAA	924.02	PASS	AB=0.959;AC=18;AF=0.321;AN=56;BaseQRankSum=1.607;DP=420;FS=16.418;HRun=0;HaplotypeScore=110.4366;InbreedingCoeff=-0.3042;MQ=49.97;MQ0=34;MQRankSum=-3.585;QD=4.13;ReadPosRankSum=-4.457;VQSLOD=-0.4189;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:24:49.97:0,50,794	0/0:5,0:5:12.04:0,12,177	0/0:53,0:8:10.81:0,11,167	0/1:45,0:9:5.98:6,0,15	0/1:11,0:9:15.38:15,0,100	0/1:11,1:12:23.36:201,0,23	0/1:8,0:7:5.16:80,0,5	0/1:20,0:20:21.19:21,0,152	0/0:12,0:12:11.51:0,12,169	1/1:13,0:12:2.08:202,2,0	0/1:10,3:10:22.85:101,0,23	0/0:8,0:8:2.45:0,2,19	0/1:5,0:5:8.14:8,0,14	0/1:9,0:8:20.66:39,0,21	0/0:15,0:15:42.02:0,42,548	0/1:5,0:5:15.74:17,0,16	0/0:40,0:37:58.03:0,58,955	0/1:11,0:11:5.70:47,0,6	0/0:17,0:18:0.15:0,0,225	0/1:4,0:5:22.75:28,0,23	0/1:6,0:6:3.61:4,0,96	0/0:5,0:4:2.88:0,3,15	0/1:11,0:10:7.95:127,0,8	0/0:7,0:6:8.45:0,8,43	0/1:10,0:9:11.51:134,0,12	0/1:19,0:19:24.43:24,0,79	0/1:15,0:15:19.58:20,0,188	0/0:6,0:6:12.03:0,12,137
chr10	91132982	.	C	CAAAAA	4334.05	PASS	AB=0.980;AC=41;AF=0.732;AN=56;BaseQRankSum=-0.356;DP=467;FS=13.699;HRun=15;HaplotypeScore=126.9924;InbreedingCoeff=0.4732;MQ=49.44;MQ0=33;MQRankSum=-6.501;QD=11.32;ReadPosRankSum=-2.827;VQSLOD=-0.1889;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:31.29:0,31,483	0/0:5,0:5:8.92:0,9,109	0/1:57,0:9:0.40:0,0,33	0/1:47,0:9:9.08:13,0,9	0/1:13,0:10:14.86:150,0,15	1/1:16,0:16:35.85:495,36,0	1/1:12,0:11:19.64:210,20,0	1/1:23,0:22:36.58:279,37,0	0/1:14,0:14:20.43:74,0,20	1/1:23,0:18:50.39:761,50,0	1/1:13,0:9:16.48:199,16,0	1/1:9,0:9:20.92:173,21,0	1/1:7,0:7:14.93:156,15,0	1/1:8,0:7:17.65:146,18,0	0/0:15,0:15:8.15:0,8,220	1/1:6,0:6:15.01:175,15,0	0/0:37,0:37:39.67:0,40,610	1/1:2,8:14:3.01:76,3,0	1/1:17,0:19:18.24:160,18,0	1/1:6,0:5:6.84:84,7,0	0/1:8,0:7:9.17:27,0,9	0/1:5,0:4:0:0,0,0	1/1:7,7:12:18.01:340,18,0	1/1:9,0:7:7.18:43,7,0	1/1:11,1:11:20.90:297,21,0	1/1:6,0:20:34.18:246,34,0	1/1:16,0:16:29.63:230,30,0	0/1:6,0:6:0:0,0,0
chr10	91134042	.	AAT	A	2360.22	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-1.461;DP=349;FS=1.892;HRun=0;HaplotypeScore=52.3603;InbreedingCoeff=0.8191;MQ=83.11;MQ0=3;MQRankSum=-0.851;QD=16.28;ReadPosRankSum=-0.702;VQSLOD=3.3067;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:48.16:0,48,843	0/0:6,0:6:12.04:0,12,219	0/0:46,0:18:36.01:0,36,474	0/1:23,0:11:7.83:8,0,136	1/1:15,1:16:30.10:420,30,0	0/0:14,0:14:26.62:0,27,204	0/0:5,0:5:14.97:0,15,158	1/1:15,3:18:30.01:387,30,0	1/1:11,0:11:20.20:285,20,0	0/0:13,0:13:32.87:0,33,284	0/0:8,0:8:20.80:0,21,192	1/1:6,0:5:9.03:128,9,0	0/0:4,0:4:3.01:0,3,38	1/1:2,6:7:3.01:43,3,0	0/0:11,0:11:24.08:0,24,432	0/0:8,0:8:20.94:0,21,192	0/0:27,0:26:51.17:0,51,915	0/0:10,0:10:17.88:0,18,132	1/1:8,1:9:15.04:199,15,0	1/1:12,0:11:15.05:212,15,0	1/1:9,0:9:9.03:128,9,0	0/0:5,0:5:11.92:0,12,89	0/0:9,0:9:26.89:0,27,238	0/0:6,0:6:5.99:0,6,50	0/0:9,0:7:17.96:0,18,168	1/1:10,0:10:18.01:234,18,0	1/1:12,4:16:33.10:443,33,0	1/1:7,0:7:6.02:83,6,0
chr10	91134043	.	AT	A	1266.17	PASS	AB=0.874;AC=22;AF=0.393;AN=56;BaseQRankSum=3.749;DP=326;FS=0.000;HRun=1;HaplotypeScore=48.3552;InbreedingCoeff=0.5896;MQ=86.12;MQ0=2;MQRankSum=-1.519;QD=8.28;ReadPosRankSum=-0.454;VQSLOD=0.4620;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:53.13:0,53,674	0/0:5,0:5:12.04:0,12,182	0/0:42,0:18:31.79:0,32,349	0/1:23,0:12:7.46:7,0,140	1/1:10,5:15:29.66:236,30,0	0/1:14,0:14:3.47:3,0,20	0/0:5,0:5:8.42:0,8,54	1/1:12,4:17:29.19:189,29,0	1/1:7,5:12:26.81:241,27,0	0/0:13,0:13:16.71:0,17,107	0/0:8,0:8:10.19:0,10,45	1/1:6,0:6:8.94:67,9,0	0/0:3,0:3:2.92:0,3,17	1/1:7,0:6:4.23:25,4,0	0/0:10,0:10:27.06:0,27,358	0/0:8,0:8:14.64:0,15,110	0/0:22,0:22:51.13:0,51,731	0/0:9,0:9:8.04:0,8,44	0/1:5,3:8:1.70:94,0,2	0/1:7,3:9:14.91:94,0,15	1/1:0,9:9:8.77:52,9,0	0/0:5,0:5:4.80:0,5,48	0/0:9,0:9:8.74:0,9,47	0/0:6,0:6:2.44:0,2,5	0/0:8,0:6:7.10:0,7,35	1/1:9,1:10:8.34:106,8,0	1/1:13,2:15:35.70:283,36,0	1/1:0,6:7:5.98:58,6,0
chr10	91134046	.	TAG	T	825.73	PASS	AB=0.958;AC=14;AF=0.250;AN=56;BaseQRankSum=6.777;DP=318;FS=9.885;HRun=0;HaplotypeScore=50.3609;InbreedingCoeff=0.1743;MQ=87.38;MQ0=1;MQRankSum=-0.757;QD=7.86;ReadPosRankSum=3.195;VQSLOD=1.7001;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.11:0,57,1033	0/0:9,0:9:24.03:0,24,343	0/0:38,0:15:41.77:0,42,611	0/0:21,2:13:7.80:0,8,298	0/1:14,0:14:14.62:143,0,15	0/0:13,0:13:27.09:0,27,412	0/0:6,0:6:18.05:0,18,284	0/1:13,0:13:6.42:125,0,6	1/1:11,0:11:0.60:120,1,0	0/0:12,0:12:33.11:0,33,545	0/0:9,0:9:27.06:0,27,392	0/1:5,0:5:35.12:40,0,35	0/0:4,0:4:9:0,9,106	0/1:7,0:6:18.72:19,0,19	0/0:8,0:8:24.08:0,24,483	0/0:7,0:7:21.07:0,21,350	0/0:24,0:24:63.15:0,63,1129	0/0:9,0:9:18.06:0,18,272	0/1:8,0:8:50.88:51,0,55	1/1:6,0:6:14.72:91,15,0	0/1:9,0:9:11.15:43,0,11	0/0:5,0:5:12.04:0,12,184	0/0:9,0:9:27.09:0,27,438	0/0:8,0:8:12:0,12,129	0/0:8,0:7:21.05:0,21,309	0/1:5,5:10:80.10:130,0,80	1/1:13,0:13:9.30:195,9,0	0/1:9,0:9:30.64:31,0,33
chr10	91134613	.	CAGAGAGAGAGAGAG	C	6735.67	PASS	AB=0.739;AC=21;AF=0.389;AN=54;BaseQRankSum=10.567;DP=698;FS=13.275;HRun=0;HaplotypeScore=267.7228;InbreedingCoeff=0.8507;MQ=61.25;MQ0=11;MQRankSum=-10.209;QD=26.01;ReadPosRankSum=4.838;VQSLOD=2.2954;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:35:66.23:0,66,3629	0/0:4,0:4:9.03:0,9,440	./.	0/0:33,0:15:11.16:0,11,144	1/1:6,16:25:15.02:432,15,0	0/0:11,0:27:28.27:0,28,1506	0/0:27,0:36:39.13:0,39,2216	1/1:20,1:21:3:46,3,0	1/1:7,17:26:39.13:1502,39,0	0/0:15,0:27:67.78:0,68,3577	0/0:18,0:22:21.07:0,21,1130	1/1:15,11:27:18.06:692,18,0	0/0:12,0:20:36.59:0,37,2130	1/1:12,15:29:18.06:713,18,0	0/0:27,0:28:67.11:0,67,3810	0/0:17,0:31:66.23:0,66,3894	0/0:24,0:27:63.22:0,63,3378	0/0:10,0:17:30.10:0,30,1552	0/1:11,5:17:18.90:577,0,19	1/1:12,8:21:12.51:476,13,0	1/1:31,4:36:5.50:84,6,0	0/0:23,0:29:30.32:0,30,1769	0/0:19,0:20:27.09:0,27,1768	0/0:30,0:36:74.93:0,75,4389	0/0:14,0:21:33.11:0,33,1881	1/1:13,11:24:27.08:958,27,0	1/1:7,13:22:18.06:663,18,0	1/1:3,7:10:15.05:594,15,0
chr10	91134773	.	A	ATGT	30313.90	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-13.029;DP=683;FS=5.169;HRun=0;HaplotypeScore=80.4601;InbreedingCoeff=0.9991;MQ=73.69;MQ0=0;MQRankSum=-7.469;QD=54.82;ReadPosRankSum=2.208;VQSLOD=7.2378;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.31:0,96,1566	0/0:9,0:9:27.05:0,27,420	0/0:18,0:18:48.15:0,48,756	0/0:11,0:11:30.10:0,30,473	1/1:2,28:30:69.24:1562,69,0	1/1:2,28:30:72.25:1628,72,0	1/1:3,19:23:57.20:1278,57,0	1/1:9,20:30:75.25:1585,75,0	1/1:2,34:36:93.32:2099,93,0	1/1:3,22:25:66.23:1493,66,0	1/1:1,10:11:27.05:564,27,0	1/1:2,21:23:54.19:1220,54,0	1/1:3,22:25:57.20:1283,57,0	1/1:2,23:26:60.21:1356,60,0	0/0:34,0:34:99:0,99,1648	1/1:4,26:32:78.21:1727,78,0	0/0:23,0:23:69.24:0,69,1149	1/1:4,24:29:60.21:1359,60,0	1/1:3,8:11:24.04:488,24,0	1/1:2,16:18:51.10:1057,51,0	1/1:1,32:33:81.28:1831,81,0	1/1:1,26:27:72.25:1625,72,0	1/1:0,16:17:45.15:1008,45,0	1/1:1,30:31:69.24:1562,69,0	1/1:0,25:26:63.22:1426,63,0	1/1:2,20:22:63.22:1393,63,0	1/1:6,24:30:81.23:1778,81,0	1/1:1,17:18:45.15:990,45,0
chr10	91134938	.	TGTGTGA	T	3198.38	PASS	AB=0.835;AC=28;AF=0.500;AN=56;BaseQRankSum=-1.047;DP=559;FS=22.629;HRun=0;HaplotypeScore=133.4279;InbreedingCoeff=0.0041;MQ=50.88;MQ0=16;MQRankSum=3.043;QD=7.40;ReadPosRankSum=-0.018;VQSLOD=0.8942;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:34:34.15:0,34,978	0/0:15,0:15:22.19:0,22,415	1/1:7,0:3:8.05:63,8,0	0/0:7,0:2:2.74:0,3,12	0/0:14,0:14:2.99:0,3,24	0/1:2,20:21:12.02:18,0,12	1/1:6,26:30:0.10:0,0,0	0/0:22,0:22:0.84:0,1,290	0/1:21,0:21:37.68:51,0,38	1/1:1,20:21:46.54:637,47,0	1/1:8,0:17:14.03:120,14,0	0/1:26,0:25:8.98:36,0,9	0/1:3,21:25:1.21:177,0,1	0/1:21,0:19:21.81:22,0,338	0/0:14,0:14:26.93:0,27,451	0/1:3,19:22:4.12:208,0,4	0/0:18,0:18:18.19:0,18,511	1/1:20,0:19:51.02:707,51,0	0/1:14,0:13:16.52:17,0,227	0/1:18,0:17:24.40:122,0,24	0/1:30,0:26:18.17:18,0,62	0/1:5,20:23:0.23:0,0,0	1/1:15,1:16:21.67:268,22,0	1/1:25,0:24:46.63:654,47,0	0/1:3,17:20:7.93:47,0,8	0/1:19,0:18:71.77:72,0,399	0/1:20,0:19:61.97:62,0,211	0/1:11,0:11:66.60:67,0,172
chr10	91134942	.	TGAGAGA	T	1817.74	PASS	AB=0.955;AC=25;AF=0.446;AN=56;BaseQRankSum=1.608;DP=561;FS=0.000;HRun=0;HaplotypeScore=138.9258;InbreedingCoeff=0.0018;MQ=51.70;MQ0=16;MQRankSum=1.833;QD=4.71;ReadPosRankSum=-0.765;VQSLOD=2.5106;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:34:51.50:0,52,1088	0/0:15,0:15:21.88:0,22,318	0/0:11,0:4:11.91:0,12,144	0/0:11,0:3:5.89:0,6,84	1/1:14,0:14:5.99:83,6,0	0/0:23,0:22:8.86:0,9,145	1/1:31,0:29:0.47:1,0,0	0/1:13,6:19:15.88:141,0,16	1/1:20,0:20:10.75:89,11,0	0/1:21,0:21:7.47:77,0,7	0/0:17,0:17:14.43:0,14,107	0/1:22,0:21:23.60:24,0,26	0/1:25,0:25:5.60:72,0,6	0/1:22,0:20:16.90:93,0,17	0/0:19,0:19:30.10:0,30,740	1/1:22,0:22:8.63:82,9,0	0/0:17,0:17:28.23:0,28,548	0/1:21,0:20:99:101,0,143	0/1:8,0:10:16.98:62,0,17	1/1:17,0:16:13.80:246,14,0	1/1:26,0:22:8.87:144,9,0	0/0:24,0:23:3.01:0,3,38	0/1:16,0:16:1.08:1,0,28	0/1:24,0:23:30.64:164,0,31	0/1:20,0:20:25.79:26,0,59	0/1:22,0:22:15.52:323,0,16	0/1:19,0:19:23.88:136,0,24	0/1:11,0:11:57.95:124,0,58
chr10	91135299	.	CCACTCCCGTGTATTATTT	C	12018.89	PASS	AB=0.529;AC=19;AF=0.352;AN=54;BaseQRankSum=13.476;DP=406;FS=14.681;HRun=0;HaplotypeScore=216.4855;InbreedingCoeff=0.8825;MQ=89.12;MQ0=0;MQRankSum=-11.356;QD=127.86;ReadPosRankSum=7.530;VQSLOD=2.6266;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,10641	0/0:9,0:9:27.09:0,27,1876	0/0:19,0:20:57.20:0,57,2931	0/0:29,0:29:78.21:0,78,5091	1/1:0,8:8:24.08:840,24,0	0/0:16,0:16:48.16:0,48,3720	0/0:16,0:16:45.63:0,46,3396	1/1:0,8:8:24.07:801,24,0	1/1:0,13:13:36.12:1896,36,0	0/0:20,0:20:54.19:0,54,4079	0/0:1,0:1:3.01:0,3,106	1/1:0,8:8:24.08:1280,24,0	0/0:14,0:14:42.14:0,42,2844	1/1:0,12:12:30.10:1603,30,0	0/0:17,0:17:48.63:0,49,3949	0/0:15,0:15:42.14:0,42,2993	0/0:31,0:31:90.31:0,90,7167	0/0:22,0:22:66.20:0,66,5100	1/1:0,5:5:15:660,15,0	./.	1/1:0,8:8:15.05:613,15,0	0/0:6,0:6:18.06:0,18,1268	0/0:7,0:7:21.07:0,21,1626	0/0:31,0:31:90.31:0,90,7229	0/0:12,0:12:33.11:0,33,2380	0/1:2,16:18:99:2240,0,484	1/1:0,6:6:18.06:962,18,0	1/1:0,8:8:21.07:1123,21,0
chr10	91135871	.	TGCTGGATCTCG	T	12875.59	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.546;DP=581;FS=0.000;HRun=0;HaplotypeScore=194.7351;InbreedingCoeff=0.9955;MQ=71.55;MQ0=0;MQRankSum=-16.520;QD=73.57;ReadPosRankSum=1.807;VQSLOD=4.6626;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,129,6597	0/0:5,0:5:15.05:0,15,764	0/0:13,0:13:33.11:0,33,1174	0/0:25,0:25:63.22:0,63,2763	0/0:16,0:16:45.15:0,45,2291	1/1:1,18:19:48.16:1677,48,0	1/1:0,23:23:63.22:2201,63,0	0/0:29,0:29:78.26:0,78,3682	0/0:21,0:21:60.21:0,60,3300	1/1:3,10:13:33.11:1120,33,0	1/1:2,8:10:18.06:629,18,0	0/0:20,0:20:54.17:0,54,2723	1/1:2,12:14:33.11:1153,33,0	0/0:21,0:21:60.21:0,60,3257	0/0:19,0:19:51.17:0,51,2593	1/1:3,10:13:30.10:1049,30,0	0/0:38,0:38:99:0,114,5980	1/1:4,11:15:26.28:921,26,0	0/0:28,0:28:81.27:0,81,4140	0/0:10,0:10:30.09:0,30,1410	0/0:60,0:60:99:0,175,9393	1/1:2,15:17:39.13:1328,39,0	1/1:6,13:19:24.08:788,24,0	1/1:4,15:19:24.08:752,24,0	1/1:1,12:13:36.12:1258,36,0	0/0:18,0:18:54.19:0,54,2863	0/0:21,0:21:60.21:0,60,3283	0/0:14,0:14:42.14:0,42,1937
chr10	91136037	.	TA	T	1825.30	PASS	AB=0.759;AC=22;AF=0.393;AN=56;BaseQRankSum=2.670;DP=533;FS=1.360;HRun=13;HaplotypeScore=73.5239;InbreedingCoeff=0.5385;MQ=81.34;MQ0=5;MQRankSum=-1.691;QD=8.41;ReadPosRankSum=4.191;VQSLOD=2.9954;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:46.61:0,47,729	0/0:1,0:1:3:0,3,29	0/0:56,0:23:17.23:0,17,216	0/0:41,0:26:43.58:0,44,335	0/0:14,0:13:27.51:0,28,263	1/1:6,13:19:34.78:246,35,0	0/1:8,12:22:14.36:210,0,14	0/0:23,1:24:8.37:0,8,369	0/1:8,2:10:11.01:11,0,199	0/1:6,7:13:1.93:129,0,2	1/1:2,7:9:11.91:88,12,0	0/0:12,1:13:4.80:0,5,171	1/1:2,14:16:29.83:219,30,0	0/1:11,1:15:16.74:17,0,155	0/0:16,0:16:42.04:0,42,396	1/1:4,6:10:18.98:149,19,0	0/0:31,0:31:84.06:0,84,792	1/1:4,20:24:41.73:303,42,0	0/0:22,0:22:51.05:0,51,482	0/0:10,0:10:23.85:0,24,198	0/0:26,0:26:38.27:0,38,518	1/1:5,7:13:22.87:155,23,0	1/1:4,9:13:23.56:169,24,0	0/1:9,12:22:42.66:213,0,43	1/1:6,7:13:14.86:109,15,0	0/1:15,2:17:7.72:8,0,245	0/0:21,0:21:30.83:0,31,430	0/0:5,0:5:12.02:0,12,116
chr10	91136330	.	C	CGT	700.77	PASS	AB=0.924;AC=19;AF=0.380;AN=50;BaseQRankSum=-2.670;DP=554;FS=16.136;HRun=0;HaplotypeScore=74.0724;InbreedingCoeff=0.1589;MQ=54.16;MQ0=28;MQRankSum=-0.743;QD=2.68;ReadPosRankSum=0.108;VQSLOD=0.4881;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:17.87:0,18,171	0/0:6,0:6:9.02:0,9,96	./.	./.	1/1:17,0:16:11.78:112,12,0	0/1:13,1:14:32.02:32,0,83	0/0:26,0:26:12.03:0,12,128	1/1:22,0:22:5.06:22,5,0	1/1:16,0:22:6.27:40,6,0	0/0:16,0:16:5.81:0,6,46	0/0:8,0:7:5.85:0,6,46	1/1:18,0:18:3.01:41,3,0	0/1:12,1:13:35.20:35,0,37	1/1:17,0:16:2.98:21,3,0	0/0:13,0:12:6.01:0,6,64	./.	0/1:23,13:35:18.04:161,0,18	0/0:30,0:38:26.24:0,26,232	0/0:15,0:14:3.01:0,3,32	0/1:8,0:9:6.45:6,0,37	0/1:34,5:38:30.45:291,0,30	0/1:16,0:16:13.21:13,0,26	0/0:9,0:9:3.01:0,3,32	0/0:31,0:31:32.91:0,33,333	0/0:15,0:16:11.60:0,12,91	0/1:13,0:13:19.07:19,0,26	1/1:22,2:22:5.98:64,6,0	0/0:2,0:1:3.01:0,3,32
chr10	91137094	.	C	CT	5287.53	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-13.226;DP=542;FS=3.753;HRun=6;HaplotypeScore=63.1498;InbreedingCoeff=0.9932;MQ=86.16;MQ0=1;MQRankSum=-0.831;QD=29.87;ReadPosRankSum=2.704;VQSLOD=5.7124;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,1198	0/0:4,0:4:12.01:0,12,115	0/0:26,0:25:28.24:0,28,332	0/0:28,0:26:61.55:0,62,545	0/0:19,0:19:53.38:0,53,509	1/1:2,27:29:61.08:756,61,0	1/1:2,26:28:69.22:868,69,0	0/0:20,0:20:50.95:0,51,490	0/0:21,0:21:63.09:0,63,624	1/1:4,11:15:42.12:504,42,0	1/1:0,7:7:21.07:264,21,0	0/0:17,0:17:51.09:0,51,508	1/1:0,14:14:29.93:377,30,0	0/0:22,0:22:60.11:0,60,599	0/0:21,0:21:54.12:0,54,551	1/1:0,13:13:39.12:490,39,0	0/0:22,0:22:63.05:0,63,615	1/1:3,8:11:24.07:293,24,0	0/0:11,0:11:33.03:0,33,317	0/0:11,0:11:33.08:0,33,336	0/0:38,0:38:99:0,105,1045	1/1:0,14:14:39.12:490,39,0	1/1:3,14:17:33.11:415,33,0	1/1:1,20:21:45.14:566,45,0	1/1:0,8:8:21.07:264,21,0	0/0:20,0:20:57.04:0,57,549	0/0:34,0:34:99:0,99,987	0/0:7,0:7:21.05:0,21,214
chr10	91138339	.	GCTCT	G	9513.75	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=11.395;DP=598;FS=17.119;HRun=0;HaplotypeScore=115.5340;InbreedingCoeff=0.9990;MQ=86.89;MQ0=0;MQRankSum=-6.763;QD=46.41;ReadPosRankSum=4.299;VQSLOD=4.4607;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,3510	0/0:10,0:10:21.07:0,21,553	0/0:23,0:23:60.21:0,60,1553	0/0:20,0:20:51.17:0,51,1251	0/0:15,0:15:45.15:0,45,1181	1/1:0,27:27:81.28:1490,81,0	1/1:1,20:21:54.19:994,54,0	0/0:26,0:26:60.20:0,60,1517	0/0:18,0:18:45.15:0,45,1180	1/1:3,20:22:51.17:938,51,0	1/1:1,8:9:27.09:491,27,0	0/0:22,0:22:63.22:0,63,1655	1/1:1,16:17:39.13:717,39,0	0/0:16,0:16:48.16:0,48,1259	0/0:29,0:29:87.30:0,87,2297	1/1:0,21:21:57.20:1049,57,0	0/0:20,0:20:60.19:0,60,1527	1/1:0,16:16:45.15:828,45,0	0/0:23,0:23:63.22:0,63,1659	0/0:20,0:20:57.20:0,57,1460	0/0:36,0:36:99:0,99,2615	1/1:3,11:14:33.11:602,33,0	1/1:2,16:18:36.12:638,36,0	1/1:2,27:29:69.24:1270,69,0	1/1:1,9:10:27.09:497,27,0	0/0:27,0:27:75.26:0,75,1975	0/0:31,0:31:84.29:0,84,2203	0/0:12,0:12:33.11:0,33,870
chr10	91139696	.	GTA	G	1279.69	PASS	AC=34;AF=0.810;AN=42;BaseQRankSum=-0.403;DP=163;FS=2.325;HRun=0;HaplotypeScore=29.4833;InbreedingCoeff=0.5460;MQ=38.04;MQ0=30;MQRankSum=-1.228;QD=12.07;ReadPosRankSum=-0.347;VQSLOD=2.5526;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:10:11.97:0,12,96	./.	./.	./.	1/1:8,0:8:2.79:23,3,0	1/1:5,0:4:3:25,3,0	./.	1/1:6,0:6:17.90:137,18,0	1/1:6,0:6:8.94:68,9,0	1/1:8,0:8:21.02:210,21,0	1/1:3,0:3:3:25,3,0	1/1:12,0:12:11.90:93,12,0	1/1:3,0:3:4.81:30,5,0	1/1:9,0:9:11.66:99,12,0	0/0:6,0:5:5.99:0,6,50	./.	0/0:4,0:3:5.94:0,6,42	1/1:6,0:3:8.97:72,9,0	1/1:6,0:5:14.92:116,15,0	1/1:6,0:6:17.74:122,18,0	1/1:10,0:5:8.78:72,9,0	0/0:0,4:4:0:0,0,0	./.	./.	1/1:4,0:4:11.99:100,12,0	1/1:9,0:9:19.36:155,19,0	1/1:2,0:2:5.91:38,6,0	1/1:3,0:1:2.96:19,3,0
chr10	91140362	.	CT	C	1007.20	PASS	AB=0.785;AC=21;AF=0.375;AN=56;BaseQRankSum=-4.310;DP=395;FS=7.515;HRun=14;HaplotypeScore=87.0200;InbreedingCoeff=0.5948;MQ=63.92;MQ0=0;MQRankSum=1.970;QD=7.19;ReadPosRankSum=3.903;VQSLOD=2.6788;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,2:23:2.08:0,2,284	0/0:5,0:5:11.98:0,12,103	0/0:13,1:9:11.72:0,12,84	0/0:18,1:8:5.90:0,6,43	0/0:13,0:26:43.54:0,44,237	1/1:6,8:14:14.81:103,15,0	1/1:2,2:4:5.90:41,6,0	0/0:11,0:22:32.05:0,32,181	0/0:13,0:13:4.47:0,4,44	1/1:8,9:18:28.46:190,28,0	1/1:8,6:14:20.72:138,21,0	0/0:7,0:7:4.78:0,5,24	1/1:2,0:2:5.65:32,6,0	0/0:9,0:10:12.20:0,12,47	0/0:7,0:7:6:0,6,52	1/1:4,3:7:17.79:121,18,0	0/0:15,0:15:23.99:0,24,212	1/1:6,4:10:17.36:109,17,0	0/0:23,0:29:49.19:0,49,265	0/0:18,0:25:32.65:0,33,166	0/0:1,0:5:5.68:0,6,29	0/1:5,1:6:13.28:36,0,13	1/1:7,11:19:14.82:217,15,0	1/1:2,7:9:5.93:41,6,0	0/1:7,10:17:31.75:167,0,32	0/0:19,0:20:23.22:0,23,138	0/1:14,1:18:3.12:3,0,82	0/0:3,0:7:2.52:0,3,32
chr10	91140388	.	TTTTTTG	T	1202.58	PASS	AB=0.952;AC=21;AF=0.389;AN=54;BaseQRankSum=10.751;DP=425;FS=18.593;HRun=0;HaplotypeScore=112.5700;InbreedingCoeff=-0.3229;MQ=46.29;MQ0=25;MQRankSum=-7.980;QD=4.29;ReadPosRankSum=6.753;VQSLOD=0.0867;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:63.02:0,63,1424	0/0:8,0:8:18.03:0,18,384	0/0:35,0:6:0.47:0,0,31	0/0:28,0:4:3.47:0,3,10	1/1:21,4:24:5.21:134,5,0	0/1:16,0:15:15.30:91,0,15	0/1:6,0:5:11.92:12,0,30	0/1:9,0:7:11.54:31,0,12	0/1:9,1:9:11.03:33,0,11	0/1:10,0:10:1.99:2,0,161	0/1:23,0:22:67.62:105,0,68	0/1:11,1:11:23.66:48,0,24	0/1:6,0:5:27.71:28,0,42	0/0:6,0:6:5.64:0,6,21	0/0:11,0:11:21.54:0,22,549	0/1:13,0:13:0.94:1,0,242	0/0:16,0:14:33.11:0,33,821	0/1:13,0:11:20.71:107,0,21	0/1:13,4:15:39.81:120,0,40	0/1:18,4:20:19.96:108,0,20	0/0:4,0:3:1.55:0,2,4	0/1:10,0:9:17.96:18,0,23	0/1:22,0:22:94.08:154,0,94	./.	0/1:23,0:23:63.56:64,0,160	0/1:13,2:14:1.85:31,0,2	0/1:13,4:17:20.28:143,0,20	1/1:7,4:6:5.63:122,6,0
chr10	91140393	.	TGTTTCTTTTTTTC	T	7917.48	PASS	AB=1.000;AC=41;AF=0.759;AN=54;BaseQRankSum=5.115;DP=316;FS=29.017;HRun=0;HaplotypeScore=89.3445;InbreedingCoeff=0.6832;MQ=35.92;MQ0=35;MQRankSum=-6.191;QD=41.24;ReadPosRankSum=2.069;VQSLOD=2.3478;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:25:63.18:0,63,2847	0/0:7,0:7:15.05:0,15,693	0/0:32,0:5:6.02:0,6,66	0/0:24,0:1:3.01:0,3,34	1/1:8,0:7:15.05:335,15,0	1/1:7,5:11:10.92:616,11,0	0/1:9,0:4:3.88:109,0,4	1/1:5,0:3:6.02:119,6,0	1/1:4,0:5:3.01:65,3,0	1/1:5,1:4:6.02:181,6,0	1/1:8,16:22:30.06:864,30,0	1/1:8,0:7:8.32:152,8,0	1/1:4,2:5:9:263,9,0	1/1:1,0:1:3.01:67,3,0	0/0:10,0:10:21.07:0,21,1000	1/1:9,1:10:8.92:232,9,0	0/0:17,0:15:36.12:0,36,1570	1/1:6,5:9:18.06:600,18,0	1/1:8,0:5:12.03:309,12,0	1/1:10,0:9:24:511,24,0	1/1:4,0:2:3.01:76,3,0	1/1:5,3:9:21.07:582,21,0	1/1:8,6:14:26.72:916,27,0	./.	1/1:5,7:12:27.08:794,27,0	1/1:7,0:7:17.42:304,17,0	1/1:12,0:12:26.29:560,26,0	1/1:11,0:6:12:263,12,0
chr10	91140405	.	T	TC	1599.40	PASS	AB=1.000;AC=24;AF=0.480;AN=50;BaseQRankSum=1.484;DP=313;FS=11.458;HRun=1;HaplotypeScore=73.5493;InbreedingCoeff=0.7245;MQ=36.10;MQ0=35;MQRankSum=-5.760;QD=12.03;ReadPosRankSum=0.166;VQSLOD=0.8449;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:19:51.07:0,51,609	0/0:7,0:7:15.05:0,15,193	./.	./.	1/1:11,0:11:15.24:157,15,0	0/0:9,0:8:5.24:0,5,54	0/0:10,0:5:13.12:0,13,94	1/1:4,7:9:23.76:178,24,0	1/1:4,2:6:5.34:28,5,0	0/0:9,0:7:12.66:0,13,83	0/1:19,0:17:12.05:12,0,37	1/1:8,0:9:11.88:111,12,0	0/1:5,0:4:4.20:4,0,40	1/1:2,1:3:8.92:80,9,0	0/0:9,0:9:21.05:0,21,256	0/0:9,0:9:4.82:0,5,51	0/0:14,0:11:18.03:0,18,205	0/0:9,0:7:9.84:0,10,47	1/1:9,1:7:17.81:171,18,0	1/1:12,1:14:9.26:286,9,0	1/1:7,0:3:5.95:57,6,0	0/0:14,0:13:10.36:0,10,103	0/0:15,0:15:7.53:0,8,110	./.	0/0:16,0:16:21.52:0,22,140	1/1:4,3:8:20.99:226,21,0	1/1:12,2:13:32.69:355,33,0	1/1:12,0:7:14.03:126,14,0
chr10	91140486	.	GTTTT	G	7067.70	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=2.352;DP=448;FS=2.437;HRun=16;HaplotypeScore=84.7201;InbreedingCoeff=0.8610;MQ=72.74;MQ0=25;MQRankSum=-2.848;QD=23.40;ReadPosRankSum=4.530;VQSLOD=4.2301;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:67.75:0,68,1288	0/0:3,0:3:6.01:0,6,93	0/0:45,0:19:20.05:0,20,223	0/0:40,0:13:29.86:0,30,394	1/1:3,11:16:31.18:366,31,0	1/1:1,15:16:36.04:473,36,0	1/1:3,5:7:11.88:158,12,0	1/1:10,9:19:7.98:292,8,0	1/1:1,9:11:30.04:378,30,0	1/1:3,12:15:32.87:434,33,0	1/1:8,6:15:1.56:256,2,0	1/1:4,5:9:11.83:157,12,0	1/1:2,7:10:24:299,24,0	1/1:2,10:12:30.04:394,30,0	0/0:9,0:9:18.02:0,18,357	1/1:5,4:10:7.20:82,7,0	0/0:14,0:16:42.01:0,42,750	1/1:1,13:16:43.35:540,43,0	1/1:4,6:10:17.16:235,17,0	1/1:5,12:17:35.81:447,36,0	1/1:4,11:12:17.98:237,18,0	1/1:4,9:11:17.88:237,18,0	1/1:4,13:19:29.20:379,29,0	1/1:2,8:11:25.32:319,25,0	1/1:5,13:18:35.60:472,36,0	1/1:4,10:14:31.29:388,31,0	1/1:7,10:17:29.92:378,30,0	1/1:2,5:7:4.55:146,5,0
chr10	91141231	.	TCACACA	T	1963.16	PASS	AB=0.726;AC=19;AF=0.339;AN=56;BaseQRankSum=2.600;DP=621;FS=0.567;HRun=0;HaplotypeScore=148.1826;InbreedingCoeff=0.3687;MQ=63.60;MQ0=16;MQRankSum=-4.969;QD=8.92;ReadPosRankSum=-1.336;VQSLOD=2.2583;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:41:47.29:0,47,976	0/0:5,0:5:12.02:0,12,285	0/0:47,0:16:6:0,6,86	0/0:57,0:16:1.80:0,2,110	0/0:6,6:12:1.25:0,1,3	0/0:8,0:14:13.73:0,14,112	0/0:18,1:31:4.91:0,5,288	0/1:15,6:20:0.76:167,0,1	1/1:6,12:17:2.74:51,3,0	0/1:12,0:12:14.55:81,0,15	0/0:5,0:10:10.84:0,11,103	1/1:4,11:16:11.91:249,12,0	0/1:8,1:13:50.40:50,0,88	0/1:8,18:27:6.97:272,0,7	0/0:10,0:11:27.06:0,27,556	0/1:5,0:15:53.43:53,0,151	0/0:34,0:39:18.72:0,19,1345	0/1:15,1:24:99:131,0,111	1/1:7,7:14:15.89:298,16,0	0/1:6,6:12:0:0,0,0	0/0:28,32:60:3.38:0,3,11	0/0:8,0:13:22.78:0,23,196	0/0:5,0:13:9.21:0,9,186	0/0:27,0:36:23.07:0,23,276	0/0:6,0:10:10.77:0,11,138	1/1:11,10:21:21.67:382,22,0	1/1:10,12:22:22.79:342,23,0	1/1:5,0:5:3.01:58,3,0
chr10	91141259	.	ACACACACG	A	1067.27	PASS	AB=0.977;AC=17;AF=0.304;AN=56;BaseQRankSum=9.329;DP=619;FS=15.259;HRun=0;HaplotypeScore=161.5087;InbreedingCoeff=-0.3762;MQ=51.21;MQ0=16;MQRankSum=-2.204;QD=2.97;ReadPosRankSum=3.293;VQSLOD=2.0828;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:78.52:0,79,1631	0/0:11,0:11:24.25:0,24,491	0/0:16,0:4:8.59:0,9,74	0/1:28,0:7:3.34:3,0,84	0/0:14,0:14:11.67:0,12,72	0/1:18,0:18:18.32:18,0,57	0/1:35,0:35:63.19:63,0,145	0/1:20,0:16:12.33:12,0,201	0/1:18,0:17:12.18:12,0,23	0/1:7,12:18:0.99:342,0,1	0/1:10,0:10:5.60:6,0,36	0/0:19,0:19:5.90:0,6,171	0/1:12,0:12:40.84:73,0,41	0/1:26,0:26:62.05:64,0,62	0/0:17,0:17:39.08:0,39,880	0/1:20,0:20:80.36:99,0,80	0/0:39,0:39:87.01:0,87,2229	0/1:26,0:26:51.82:232,0,52	0/1:18,0:16:39.20:39,0,152	0/0:10,0:10:8.88:0,9,74	0/0:73,0:72:60.09:0,60,472	0/0:18,0:18:18.19:0,18,123	0/1:15,0:13:18.51:19,0,70	0/1:33,0:32:10.39:10,0,141	0/1:18,0:17:17.35:17,0,59	0/1:22,0:21:91.33:91,0,109	0/1:20,0:20:39.59:119,0,40	0/0:6,0:6:5.77:0,6,39
chr10	91141265	.	ACG	A	1233.29	PASS	AB=0.994;AC=28;AF=0.500;AN=56;BaseQRankSum=10.508;DP=597;FS=12.151;HRun=0;HaplotypeScore=116.1838;InbreedingCoeff=0.3914;MQ=51.75;MQ0=14;MQRankSum=0.140;QD=3.64;ReadPosRankSum=-0.544;VQSLOD=1.2787;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,1:38:62.15:0,62,846	0/0:11,0:11:1.26:0,1,253	0/1:11,0:3:1.23:1,0,5	0/1:16,0:5:5.68:6,0,63	0/0:14,0:14:11.04:0,11,65	1/1:16,0:16:10.56:88,11,0	1/1:33,0:33:22.24:171,22,0	0/1:19,0:15:20.72:21,0,129	0/1:18,0:17:13.89:14,0,29	1/1:19,0:18:11.55:187,12,0	1/1:10,0:9:12.10:58,12,0	0/0:20,0:20:22.35:0,22,168	1/1:11,1:12:18.77:114,19,0	0/0:27,0:27:9.21:0,9,119	0/0:15,0:15:24.20:0,24,422	1/1:22,0:22:29.05:115,29,0	0/0:39,1:40:24.37:0,24,1045	1/1:24,0:24:2.95:141,3,0	0/1:17,0:14:7.39:7,0,120	0/0:11,0:11:8.99:0,9,74	0/0:78,0:77:74.46:0,74,584	1/1:15,0:15:10.29:48,10,0	1/1:13,0:12:18.19:72,18,0	0/1:31,0:30:6.73:153,0,7	1/1:18,1:18:16.74:124,17,0	0/1:24,0:23:32.99:33,0,194	0/1:19,1:20:70.21:70,0,71	0/0:4,0:4:5.66:0,6,39
chr10	91141267	.	GCACGCA	G	1528.04	PASS	AB=0.947;AC=26;AF=0.464;AN=56;BaseQRankSum=7.902;DP=580;FS=5.376;HRun=0;HaplotypeScore=139.4791;InbreedingCoeff=0.4475;MQ=51.82;MQ0=14;MQRankSum=-3.462;QD=4.96;ReadPosRankSum=3.533;VQSLOD=2.2344;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:63.19:0,63,1491	0/0:12,0:12:24.05:0,24,505	0/0:11,0:3:6.01:0,6,62	0/0:12,0:5:9.78:0,10,101	0/0:13,0:13:9.02:0,9,198	1/1:16,0:16:5.86:77,6,0	1/1:32,0:32:12.04:220,12,0	0/0:21,0:17:15.05:0,15,316	0/1:17,0:16:54.88:55,0,65	1/1:19,0:18:24.22:230,24,0	1/1:10,0:9:3.01:61,3,0	0/1:19,0:19:14.81:15,0,460	1/1:9,1:10:6.02:110,6,0	0/1:26,0:26:28.23:28,0,343	0/0:15,0:15:27.09:0,27,740	1/1:18,2:20:9.02:149,9,0	0/0:38,0:38:54.18:0,54,1447	1/1:22,4:26:21.07:409,21,0	0/0:17,0:14:1.20:0,1,225	0/0:12,0:12:11.91:0,12,278	0/0:79,0:78:82.68:0,83,1856	0/1:7,6:13:0:0,0,0	1/1:10,1:11:3.48:49,3,0	1/1:29,0:29:11.64:235,12,0	1/1:17,1:17:3.01:53,3,0	0/1:24,0:23:19.03:19,0,549	0/1:17,0:17:1.60:2,0,168	0/0:4,0:4:6.02:0,6,129
chr10	91141271	.	GCA	G	514.59	PASS	AB=0.813;AC=11;AF=0.196;AN=56;BaseQRankSum=6.463;DP=547;FS=0.000;HRun=0;HaplotypeScore=111.4006;InbreedingCoeff=-0.2450;MQ=52.69;MQ0=12;MQRankSum=-1.525;QD=2.64;ReadPosRankSum=2.677;VQSLOD=2.0671;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:87.26:0,87,1464	0/0:12,0:12:30.07:0,30,464	0/0:7,0:3:8.94:0,9,105	0/0:8,0:6:12.03:0,12,153	0/0:13,0:13:14.41:0,14,216	0/1:6,6:12:28.26:28,0,56	0/1:15,15:30:78.67:79,0,244	0/0:17,0:13:26.90:0,27,364	0/1:16,0:15:30.19:30,0,66	0/1:20,0:19:42.96:43,0,109	0/1:9,0:8:26.33:26,0,99	0/0:18,0:18:33.07:0,33,513	0/1:5,4:9:60.63:61,0,61	0/0:26,0:26:36.09:0,36,520	0/0:11,0:11:27.09:0,27,490	0/1:11,7:18:30.02:30,0,137	0/0:39,0:39:87.80:0,88,1396	0/1:13,13:26:99:166,0,106	0/0:15,0:13:35.78:0,36,440	0/0:13,0:13:15.05:0,15,265	0/0:79,0:78:93.21:0,93,1602	0/0:12,0:12:11.38:0,11,120	0/1:8,1:9:0.34:0,0,84	0/1:27,0:26:99:173,0,143	0/1:8,11:18:20.72:21,0,72	0/0:25,0:24:37.73:0,38,617	0/0:17,0:17:23.39:0,23,332	0/0:3,0:3:6.02:0,6,110
chr10	91142531	.	GGAGA	G	133.05	PASS	AB=0.978;AC=11;AF=0.229;AN=48;BaseQRankSum=0.599;DP=319;FS=6.180;HRun=0;HaplotypeScore=57.5429;InbreedingCoeff=0.1101;MQ=53.87;MQ0=11;MQRankSum=1.798;QD=1.49;ReadPosRankSum=1.292;VQSLOD=0.7856;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:3:0,3,25	0/1:4,0:4:11.99:12,0,20	./.	0/0:16,0:9:0:0,0,0	0/0:7,0:7:5.99:0,6,49	0/0:9,0:9:2.60:0,3,10	0/0:13,0:12:5.92:0,6,43	0/0:12,0:11:3.45:0,3,22	0/0:9,0:9:17.90:0,18,152	0/0:9,0:8:2.68:0,3,11	./.	0/0:13,0:13:5.99:0,6,50	1/1:5,3:8:3.01:46,3,0	0/0:16,0:16:5.95:0,6,50	1/1:14,6:20:3.01:46,3,0	1/1:13,0:13:3.01:46,3,0	0/1:10,0:9:16.01:39,0,16	0/0:12,0:12:0:0,0,0	0/0:11,0:11:2.98:0,3,21	./.	0/0:15,0:13:2.93:0,3,24	0/0:8,0:8:2.99:0,3,24	0/1:7,1:7:2.12:2,0,49	0/1:14,0:13:3.98:44,0,4	./.	0/0:11,0:10:10.73:0,11,71	0/1:12,0:12:16.09:16,0,28	0/0:18,0:16:4.67:0,5,22
chr10	91143859	.	G	GC	11860.89	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-16.070;DP=736;FS=8.808;HRun=0;HaplotypeScore=68.6429;InbreedingCoeff=0.9999;MQ=94.14;MQ0=0;MQRankSum=-2.923;QD=41.76;ReadPosRankSum=-1.392;VQSLOD=4.5340;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,147,2032	0/0:10,0:10:30.09:0,30,404	0/0:39,0:39:99:0,102,1395	0/0:25,0:25:71.18:0,71,926	1/1:0,19:19:35.99:512,36,0	0/0:22,0:22:63.17:0,63,858	0/0:23,0:23:69.22:0,69,940	1/1:0,34:34:99:1575,102,0	1/1:0,31:31:75.26:1198,75,0	0/0:29,0:29:87.28:0,87,1202	0/0:19,0:19:57.19:0,57,790	1/1:0,15:15:45.15:719,45,0	0/0:15,0:15:45.14:0,45,613	1/1:0,26:26:69.24:1098,69,0	0/0:25,0:25:75.23:0,75,1030	0/0:27,0:27:78.24:0,78,1059	0/0:44,0:44:99:0,129,1728	0/0:23,0:23:69.23:0,69,962	1/1:0,18:18:54.16:828,54,0	1/1:0,26:26:72.24:1094,72,0	1/1:2,46:49:99:1915,120,0	0/0:29,0:29:81.16:0,81,1105	0/0:17,0:17:51.17:0,51,706	0/0:37,0:37:99:0,111,1531	0/0:19,0:19:54.17:0,54,737	1/1:1,22:25:69.22:1051,69,0	1/1:0,24:24:66.23:1055,66,0	1/1:0,17:17:51.17:815,51,0
chr10	91144456	.	GTGAGTGAATGAA	G	3726.76	PASS	AB=0.792;AC=20;AF=0.370;AN=54;BaseQRankSum=-1.335;DP=938;FS=18.902;HRun=0;HaplotypeScore=283.4132;InbreedingCoeff=0.7790;MQ=50.02;MQ0=42;MQRankSum=1.924;QD=10.74;ReadPosRankSum=-4.367;VQSLOD=0.7195;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:78.08:0,78,1952	0/0:19,0:19:47.75:0,48,1465	./.	0/0:20,0:3:2.14:0,2,40	0/0:33,0:32:12.74:0,13,907	1/1:8,36:40:2.99:103,3,0	1/1:33,0:20:20.94:304,21,0	0/0:46,0:31:42.12:0,42,768	0/0:56,0:50:65.01:0,65,1953	1/1:18,19:36:54.18:1208,54,0	1/1:5,22:26:23.88:358,24,0	0/0:41,0:36:42.78:0,43,1047	1/1:25,0:20:25.14:656,25,0	0/0:35,0:32:22.95:0,23,1064	0/0:57,0:56:99:0,126,4081	1/1:33,0:28:36.11:624,36,0	0/0:27,0:25:51.56:0,52,1503	0/0:10,25:32:6.48:0,6,83	0/0:23,0:22:30.47:0,30,1109	0/1:33,0:30:5.56:6,0,1364	0/0:48,0:44:87.88:0,88,1750	1/1:8,27:35:13.09:149,13,0	0/1:10,25:35:0.01:0,0,1	1/1:29,0:24:12.91:246,13,0	1/1:4,12:16:3.01:74,3,0	0/0:46,0:45:4.99:0,5,1889	0/0:35,0:35:67.12:0,67,1260	0/0:21,0:21:28.32:0,28,749
chr10	91144480	.	ATGAG	A	5794.72	PASS	AB=0.794;AC=12;AF=0.214;AN=56;BaseQRankSum=-1.609;DP=1017;FS=16.240;HRun=0;HaplotypeScore=185.0133;InbreedingCoeff=-0.3076;MQ=50.29;MQ0=43;MQRankSum=-0.790;QD=10.63;ReadPosRankSum=1.084;VQSLOD=3.5108;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:81.26:0,81,1859	0/0:18,0:18:45.15:0,45,1013	0/0:13,0:1:3.01:0,3,51	0/0:13,0:2:5.97:0,6,87	0/1:17,23:38:99:258,0,729	0/0:49,0:43:6.09:0,6,338	0/0:30,0:17:33.11:0,33,673	0/1:36,1:26:99:337,0,232	0/1:56,11:62:99:556,0,1695	0/0:33,0:31:30.92:0,31,898	0/0:24,0:22:30.12:0,30,496	0/1:23,31:51:99:547,0,888	0/0:27,0:23:47.96:0,48,885	0/1:32,5:34:99:365,0,984	0/0:50,0:49:99:0,114,2484	0/0:41,0:35:64.85:0,65,1184	0/0:24,0:22:50.85:0,51,980	0/1:36,0:31:15.90:16,0,40	0/1:16,16:30:99:643,0,547	0/1:36,11:44:99:614,0,1140	0/1:50,10:56:99:686,0,1135	0/0:31,0:31:29.15:0,29,459	0/0:34,0:34:14.33:0,14,260	0/0:32,0:28:3.52:0,4,582	0/0:17,0:17:8.71:0,9,99	0/1:53,11:61:99:841,0,1444	0/1:30,12:41:99:470,0,817	0/1:8,21:29:99:461,0,232
chr10	91144594	.	GAATGAATA	G	1275.92	PASS	AB=1.000;AC=17;AF=0.340;AN=50;BaseQRankSum=2.071;DP=494;FS=5.243;HRun=0;HaplotypeScore=120.5198;InbreedingCoeff=0.8609;MQ=49.13;MQ0=31;MQRankSum=3.422;QD=16.79;ReadPosRankSum=-5.349;VQSLOD=0.4956;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:90.22:0,90,3239	0/0:17,0:17:45.15:0,45,1755	0/0:27,0:6:18.04:0,18,402	0/0:26,0:13:34.32:0,34,750	1/1:4,0:3:5.99:48,6,0	0/0:36,0:28:52.93:0,53,906	0/0:26,0:12:30.94:0,31,495	./.	1/1:12,0:12:24.06:358,24,0	0/0:26,0:17:42.57:0,43,769	0/0:15,0:12:32.84:0,33,534	1/1:5,0:4:12.01:146,12,0	0/0:25,0:20:44.22:0,44,883	1/1:6,0:6:14.99:144,15,0	0/0:42,0:42:99:0,126,4471	0/0:26,0:24:45.01:0,45,724	0/0:20,0:20:60.07:0,60,2023	0/0:26,0:20:44.98:0,45,820	./.	./.	1/1:11,0:9:9.03:160,9,0	0/0:27,0:21:27.39:0,27,752	0/0:14,0:11:23.32:0,23,536	0/0:18,0:11:19.26:0,19,362	0/1:20,0:17:7.78:8,0,556	1/1:3,0:3:9:124,9,0	1/1:5,0:5:9.01:119,9,0	1/1:10,0:10:24.08:357,24,0
chr10	91144744	.	A	ATGAGTGAG	4820.11	PASS	AB=0.646;AC=19;AF=0.352;AN=54;BaseQRankSum=-1.257;DP=649;FS=3.177;HRun=0;HaplotypeScore=124.4326;InbreedingCoeff=0.8184;MQ=52.10;MQ0=30;MQRankSum=-6.156;QD=18.61;ReadPosRankSum=-3.138;VQSLOD=3.4945;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:55.05:0,55,1138	0/0:10,0:10:18.06:0,18,429	0/0:10,0:3:5.88:0,6,54	0/0:13,0:4:6:0,6,63	1/1:7,14:22:15.05:237,15,0	0/0:30,0:26:53.21:0,53,1269	0/0:21,0:20:36.09:0,36,712	1/1:32,0:9:9.02:117,9,0	1/1:16,27:43:6.02:218,6,0	0/0:31,0:29:57.18:0,57,1195	0/0:15,0:14:30.07:0,30,638	1/1:18,10:29:6.02:242,6,0	0/0:20,0:20:36.09:0,36,702	1/1:9,14:24:9.03:285,9,0	0/0:29,0:29:48.16:0,48,1189	0/0:27,0:27:54.13:0,54,1218	0/0:29,0:29:66.20:0,66,1526	0/0:17,0:17:30.08:0,30,570	1/1:9,0:7:15.03:289,15,0	1/1:27,0:26:50.52:1429,51,0	1/1:26,0:24:27.05:407,27,0	0/0:23,0:22:27.06:0,27,515	0/0:21,0:20:33.10:0,33,762	0/0:28,0:27:55.88:0,56,1264	0/0:17,0:17:39.12:0,39,835	0/1:14,15:31:22.32:1225,0,22	./.	1/1:4,9:13:9.03:370,9,0
chr10	91144879	.	G	GA	3905.99	PASS	AB=0.713;AC=19;AF=0.352;AN=54;BaseQRankSum=-3.553;DP=649;FS=10.495;HRun=12;HaplotypeScore=64.9111;InbreedingCoeff=0.4896;MQ=56.69;MQ0=19;MQRankSum=0.040;QD=12.85;ReadPosRankSum=-2.443;VQSLOD=2.0641;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:37:42.40:0,42,443	0/0:7,0:6:14.85:0,15,103	./.	0/1:14,0:5:30.66:31,0,41	0/1:10,17:27:10.47:334,0,10	0/0:22,0:23:37.58:0,38,260	0/0:34,1:34:38.59:0,39,420	1/1:10,23:30:49.03:593,49,0	1/1:17,6:22:22.62:336,23,0	0/0:21,1:20:23.27:0,23,216	0/0:20,0:22:48.74:0,49,334	0/1:5,15:21:4.02:267,0,4	0/0:18,0:20:24.74:0,25,219	1/1:5,19:25:41.86:394,42,0	0/1:21,3:26:23.84:24,0,319	0/0:15,1:16:13.10:0,13,251	0/0:30,0:31:44.23:0,44,454	0/0:20,0:19:41.67:0,42,299	0/1:10,15:20:11.47:369,0,11	1/1:5,18:23:41.37:360,41,0	0/1:8,17:26:9.87:216,0,10	0/0:21,0:20:41.21:0,41,278	0/0:16,0:19:28.23:0,28,189	0/0:37,0:36:88.25:0,88,619	0/0:22,0:21:22.99:0,23,169	0/1:11,8:19:5.22:260,0,5	1/1:6,18:25:66.39:620,66,0	1/1:5,9:15:11.89:102,12,0
chr10	91147316	.	AC	A	13079.77	PASS	AB=0.621;AC=38;AF=0.679;AN=56;BaseQRankSum=14.517;DP=935;FS=0.000;HRun=1;HaplotypeScore=238.9806;InbreedingCoeff=0.5183;MQ=55.02;MQ0=8;MQRankSum=0.942;QD=18.77;ReadPosRankSum=4.439;VQSLOD=4.6703;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,129,2001	0/0:10,0:10:30.10:0,30,472	0/0:43,0:15:33.07:0,33,434	0/0:49,0:18:13.02:0,13,320	1/1:4,29:34:76.20:641,76,0	1/1:5,22:24:14.11:441,14,0	0/1:13,23:34:99:522,0,196	0/1:14,9:20:99:201,0,169	1/1:4,37:39:99:924,102,0	1/1:12,37:48:99:1259,140,0	1/1:6,11:17:30.50:282,31,0	1/1:11,33:42:90.77:802,91,0	1/1:5,29:30:79.99:694,80,0	1/1:6,26:31:78.82:669,79,0	0/0:69,0:69:99:0,208,3200	1/1:8,39:47:99:1083,127,0	0/0:20,0:20:54.18:0,54,855	0/1:7,14:19:4.61:319,0,5	1/1:5,9:13:34.29:278,34,0	0/1:10,11:21:47.17:282,0,47	1/1:21,62:81:99:1459,136,0	1/1:5,25:30:72.61:613,73,0	0/1:8,15:22:55.07:219,0,55	1/1:6,28:33:82.40:701,82,0	1/1:9,15:23:55.60:435,56,0	0/1:4,26:28:21.12:572,0,21	1/1:3,20:23:62.39:525,62,0	1/1:1,9:10:18:160,18,0
chr10	91147317	.	CGA	C	22209.56	PASS	AB=0.987;AC=39;AF=0.696;AN=56;BaseQRankSum=14.132;DP=928;FS=1.828;HRun=0;HaplotypeScore=220.1026;InbreedingCoeff=0.4027;MQ=55.15;MQ0=8;MQRankSum=0.043;QD=30.22;ReadPosRankSum=3.210;VQSLOD=5.4044;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,129,2405	0/0:10,0:10:30.10:0,30,568	0/1:41,0:15:3.88:4,0,255	0/0:45,1:18:3.40:0,3,387	1/1:34,0:34:78.20:1080,78,0	1/1:27,0:24:5.51:780,6,0	0/1:36,0:34:99:918,0,254	0/1:21,0:20:99:490,0,214	1/1:41,0:39:99:1579,111,0	1/1:51,0:50:99:1988,147,0	1/1:11,6:17:33.11:484,33,0	1/1:34,9:41:87.29:1274,87,0	1/1:33,0:29:78.24:1104,78,0	1/1:26,5:31:81.27:1174,81,0	0/0:69,0:69:99:0,196,3649	1/1:47,0:47:99:1680,123,0	0/0:20,0:20:57.15:0,57,1039	0/1:18,0:17:6.54:629,0,7	1/1:14,0:13:39.02:489,39,0	0/1:21,0:21:90.07:458,0,90	1/1:82,0:80:99:2502,133,0	1/1:31,0:31:80.19:1046,80,0	0/1:22,0:21:70.80:446,0,71	1/1:33,0:32:81.23:1128,81,0	1/1:25,0:24:66.07:809,66,0	0/1:30,0:28:31.81:985,0,32	1/1:23,0:23:63.20:898,63,0	1/1:10,0:10:18.06:263,18,0
chr10	91147318	.	GA	G	13274.43	PASS	AB=0.664;AC=39;AF=0.696;AN=56;BaseQRankSum=13.936;DP=936;FS=0.313;HRun=1;HaplotypeScore=239.7754;InbreedingCoeff=0.4497;MQ=55.19;MQ0=8;MQRankSum=1.723;QD=17.70;ReadPosRankSum=4.421;VQSLOD=4.7716;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,2123	0/0:10,0:10:30.10:0,30,480	0/0:41,0:15:29.08:0,29,342	0/1:48,1:19:5.46:5,0,348	1/1:5,29:34:76.67:644,77,0	1/1:5,22:24:17.52:477,18,0	0/1:15,23:36:99:571,0,190	0/1:11,9:20:99:206,0,187	1/1:4,37:39:99:925,104,0	1/1:16,37:52:99:1360,152,0	1/1:6,11:17:32.25:288,32,0	1/1:9,33:40:86.88:776,87,0	1/1:5,29:30:80.17:695,80,0	1/1:6,26:31:78.67:668,79,0	0/0:66,0:66:99:0,199,3097	1/1:11,38:49:99:1062,124,0	0/0:21,0:21:60.13:0,60,905	0/1:6,14:18:3.59:320,0,4	1/1:7,9:15:37.32:292,37,0	0/1:9,11:20:72.97:228,0,73	1/1:21,62:81:99:1529,144,0	1/1:6,25:31:75.86:633,76,0	0/1:7,16:22:55:221,0,55	1/1:5,28:32:79.60:681,80,0	1/1:10,15:24:55.95:442,56,0	0/1:4,26:28:20.71:561,0,21	1/1:3,21:24:62.52:529,63,0	1/1:0,9:9:18:160,18,0
chr10	91149371	.	GT	G	4251.08	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-4.513;DP=601;FS=4.126;HRun=10;HaplotypeScore=92.6261;InbreedingCoeff=0.9346;MQ=79.57;MQ0=1;MQRankSum=-0.530;QD=19.24;ReadPosRankSum=2.036;VQSLOD=5.4742;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,1:53:99:0,127,1572	0/0:4,0:4:11.87:0,12,114	0/0:18,1:18:1.03:0,1,214	0/0:23,0:23:5.37:0,5,225	1/1:3,17:20:40.32:320,40,0	0/0:4,0:22:42.92:0,43,216	0/0:5,0:27:57.53:0,58,302	1/1:3,16:19:30.73:376,31,0	1/1:3,17:20:41.98:364,42,0	0/0:5,0:19:43.27:0,43,237	0/0:0,0:9:25.97:0,26,136	1/1:5,14:19:35.98:312,36,0	0/0:1,0:21:37.56:0,38,186	1/1:3,25:28:71.97:625,72,0	0/0:20,0:20:57.13:0,57,612	0/0:0,0:19:43.02:0,43,217	0/0:42,1:43:85.25:0,85,1169	0/0:5,0:17:34.33:0,34,172	1/1:4,15:19:44.32:365,44,0	1/1:2,14:15:41.99:363,42,0	1/1:4,26:30:70.21:602,70,0	0/0:5,0:26:46.30:0,46,251	0/0:3,0:11:14.31:0,14,72	0/0:3,0:34:80.33:0,80,405	0/0:3,0:13:25.97:0,26,141	1/1:6,21:28:51.34:532,51,0	1/1:2,13:15:35.98:312,36,0	1/1:1,6:7:8.99:78,9,0
chr10	91150471	.	TC	T	16973.75	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=8.258;DP=615;FS=4.867;HRun=2;HaplotypeScore=64.6828;InbreedingCoeff=0.9986;MQ=83.01;MQ0=0;MQRankSum=-3.532;QD=35.96;ReadPosRankSum=3.394;VQSLOD=5.5044;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,1936	0/0:9,0:9:27.09:0,27,401	0/0:15,0:15:36.12:0,36,514	0/0:19,0:19:32.99:0,33,627	1/1:0,16:16:42.14:543,42,0	1/1:0,28:28:81.26:1052,81,0	1/1:0,26:26:78.25:1013,78,0	1/1:2,29:31:87.28:1127,87,0	1/1:0,21:21:63.20:818,63,0	1/1:0,20:20:60.17:763,60,0	1/1:1,8:9:24.08:312,24,0	1/1:0,35:35:96.30:1246,96,0	1/1:0,11:11:24.08:312,24,0	1/1:1,17:18:51.17:662,51,0	0/0:27,0:27:81.26:0,81,1193	1/1:0,19:19:54.18:701,54,0	0/0:27,0:27:81.26:0,81,1193	1/1:0,16:16:48.16:623,48,0	1/1:1,18:19:54.18:701,54,0	1/1:0,17:17:45.15:584,45,0	1/1:0,49:49:99:1753,135,0	1/1:0,18:18:45.15:584,45,0	1/1:1,13:14:39.13:506,39,0	1/1:0,29:29:66.21:857,66,0	1/1:1,15:16:42.14:545,42,0	1/1:0,27:27:81.23:1023,81,0	1/1:0,23:23:69.22:896,69,0	1/1:0,10:10:27.09:351,27,0
chr10	91152006	.	T	TCACACACACACACA	8494.65	PASS	AB=0.813;AC=41;AF=0.788;AN=52;BaseQRankSum=0.818;DP=676;FS=2.887;HRun=0;HaplotypeScore=252.4362;InbreedingCoeff=0.6678;MQ=54.44;MQ0=16;MQRankSum=-6.936;QD=18.35;ReadPosRankSum=-5.345;VQSLOD=2.6344;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:43:31.84:0,32,1872	0/0:6,0:7:18.06:0,18,535	./.	0/0:45,0:12:3.01:0,3,65	1/1:16,0:15:5.97:45,6,0	1/1:14,2:17:3.01:200,3,0	1/1:40,0:38:15.47:186,15,0	1/1:21,0:21:26.93:901,27,0	1/1:11,1:14:10.28:509,10,0	1/1:21,0:21:24.06:556,24,0	./.	1/1:22,1:26:7.20:345,7,0	1/1:21,0:21:20.67:630,21,0	1/1:18,1:21:9.03:434,9,0	0/0:16,0:21:51.15:0,51,1748	1/1:13,0:19:18.06:818,18,0	0/0:26,0:33:72.21:0,72,2383	1/1:19,0:24:28.40:815,28,0	1/1:18,0:18:18.06:681,18,0	1/1:14,0:13:6.02:84,6,0	1/1:36,0:33:5.82:87,6,0	1/1:25,0:29:3.01:142,3,0	1/1:21,0:19:2.80:37,3,0	1/1:27,0:41:3.09:143,3,0	0/1:10,0:13:0:0,0,0	1/1:24,0:23:29.59:981,30,0	1/1:17,0:17:21.07:726,21,0	1/1:7,0:6:6.02:173,6,0
chr10	91155062	.	G	GTTT	9893.33	PASS	AB=0.982;AC=45;AF=0.804;AN=56;BaseQRankSum=1.988;DP=513;FS=0.000;HRun=10;HaplotypeScore=91.5116;InbreedingCoeff=0.8973;MQ=65.68;MQ0=19;MQRankSum=-4.513;QD=25.63;ReadPosRankSum=1.164;VQSLOD=3.5402;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:55.49:0,55,686	0/0:5,0:5:12.04:0,12,145	0/0:47,0:21:20.61:0,21,196	0/1:53,0:13:1.37:1,0,90	1/1:24,0:24:59.98:745,60,0	1/1:1,9:10:24.04:423,24,0	1/1:0,12:12:24.08:442,24,0	1/1:26,0:25:30.80:388,31,0	1/1:10,0:10:24.08:338,24,0	1/1:0,7:10:30.07:495,30,0	1/1:2,13:16:40.22:583,40,0	1/1:13,0:13:23.87:319,24,0	1/1:3,6:9:12.04:231,12,0	1/1:9,0:9:20.97:251,21,0	0/0:15,0:16:31.45:0,31,398	1/1:2,9:11:18.06:346,18,0	0/0:29,0:29:66.19:0,66,800	1/1:7,14:22:22.17:621,22,0	1/1:20,0:20:41.90:466,42,0	1/1:14,0:14:11.42:450,11,0	1/1:12,0:11:15.05:212,15,0	1/1:5,13:19:39.09:691,39,0	1/1:2,17:20:45.13:830,45,0	1/1:7,3:9:12.04:214,12,0	1/1:3,7:13:30.06:489,30,0	1/1:21,0:21:21.38:536,21,0	1/1:21,0:21:45.45:609,45,0	1/1:7,0:7:15.05:214,15,0
chr10	91155070	.	T	TTTG	9655.06	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=1.649;DP=534;FS=2.041;HRun=0;HaplotypeScore=92.8189;InbreedingCoeff=0.4719;MQ=57.67;MQ0=22;MQRankSum=-5.236;QD=24.38;ReadPosRankSum=2.571;VQSLOD=4.7735;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:65.79:0,66,916	0/0:5,0:5:15.02:0,15,202	0/0:63,0:18:4.60:0,5,242	0/1:69,0:13:7.34:7,0,125	1/1:9,15:25:71.42:1076,71,0	0/1:12,0:12:1.71:204,0,2	0/1:15,0:15:15.60:211,0,16	1/1:3,22:25:63.02:870,63,0	1/1:1,10:11:24.08:482,24,0	1/1:11,0:11:25.45:249,25,0	1/1:14,0:15:20.07:266,20,0	1/1:5,7:13:27.01:477,27,0	1/1:7,0:7:12.03:133,12,0	1/1:4,3:8:23.94:366,24,0	0/0:15,0:15:38.70:0,39,514	1/1:11,0:11:18.03:180,18,0	0/0:29,0:27:72.22:0,72,1040	0/1:20,0:19:20.69:280,0,21	1/1:5,15:21:54.04:864,54,0	1/1:2,12:14:36.06:699,36,0	1/1:3,6:8:15.05:286,15,0	0/1:22,0:22:99:265,0,103	1/1:19,0:19:43.35:461,43,0	0/1:9,0:8:37.48:61,0,37	1/1:11,0:11:8.87:197,9,0	1/1:14,11:25:33.94:796,34,0	1/1:2,13:17:51.08:915,51,0	1/1:0,7:7:15.05:309,15,0
chr10	91155097	.	T	TTTTG	5931.67	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=6.045;DP=543;FS=13.300;HRun=0;HaplotypeScore=109.7498;InbreedingCoeff=0.9349;MQ=47.02;MQ0=24;MQRankSum=-10.432;QD=36.39;ReadPosRankSum=2.404;VQSLOD=4.3109;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:60.18:0,60,954	0/0:7,0:7:21.07:0,21,340	0/0:54,0:14:20.32:0,20,223	0/0:60,0:7:9.03:0,9,133	1/1:10,17:27:48.16:1157,48,0	0/0:14,0:12:24.06:0,24,366	0/0:12,0:12:15.01:0,15,216	1/1:17,4:16:21.04:377,21,0	1/1:3,5:8:21.05:449,21,0	0/0:15,0:15:23.66:0,24,391	0/0:14,0:14:33.11:0,33,539	1/1:4,8:12:24.08:578,24,0	0/0:6,0:6:9.03:0,9,147	1/1:2,5:7:18.06:406,18,0	0/0:15,0:15:36.12:0,36,588	0/0:11,0:11:18.06:0,18,294	0/0:36,0:34:66.03:0,66,994	0/0:25,0:25:2.60:0,3,585	1/1:13,4:15:21.07:488,21,0	1/1:9,7:15:24.08:578,24,0	1/1:5,5:9:12.04:273,12,0	0/0:27,0:27:63.22:0,63,1029	0/0:24,0:24:45.15:0,45,732	0/0:13,0:12:23.95:0,24,342	0/0:13,0:13:24.08:0,24,392	1/1:12,11:21:36.04:810,36,0	1/1:9,8:16:27.09:648,27,0	1/1:2,2:4:9.01:168,9,0
chr10	91155123	.	C	CT	2367.41	PASS	AB=0.591;AC=19;AF=0.365;AN=52;BaseQRankSum=6.303;DP=438;FS=8.026;HRun=7;HaplotypeScore=77.1211;InbreedingCoeff=0.8709;MQ=46.75;MQ0=14;MQRankSum=-9.990;QD=17.54;ReadPosRankSum=-2.635;VQSLOD=2.6411;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:57.09:0,57,548	0/0:6,0:6:18.03:0,18,174	./.	0/0:15,0:3:2.97:0,3,21	1/1:5,19:23:20.98:215,21,0	0/0:16,0:12:30.05:0,30,288	0/0:13,0:11:24.03:0,24,231	1/1:8,7:13:27.04:310,27,0	1/1:2,5:7:15.05:181,15,0	0/0:16,0:16:42.04:0,42,398	0/0:19,0:18:36.05:0,36,347	0/1:4,9:13:7.91:173,0,8	0/0:6,0:6:9.01:0,9,87	1/1:2,6:8:18.01:201,18,0	0/0:19,0:19:33.05:0,33,318	0/0:10,0:10:21.03:0,21,203	0/0:38,0:34:66.09:0,66,636	0/0:31,0:27:26.21:0,26,385	1/1:2,8:10:24.07:290,24,0	1/1:5,8:12:24.02:260,24,0	1/1:3,4:6:9.03:109,9,0	0/0:24,0:24:51.06:0,51,492	0/0:17,0:17:29.80:0,30,289	0/0:17,0:15:11.99:0,12,295	0/0:16,0:16:33.05:0,33,319	1/1:5,14:17:36.11:435,36,0	1/1:5,14:18:33.10:398,33,0	./.
chr10	91155278	.	CCTCTGT	C	8571.45	PASS	AB=0.786;AC=44;AF=0.786;AN=56;BaseQRankSum=10.876;DP=509;FS=6.949;HRun=0;HaplotypeScore=127.0585;InbreedingCoeff=0.8167;MQ=61.76;MQ0=5;MQRankSum=-8.840;QD=22.80;ReadPosRankSum=0.138;VQSLOD=4.1387;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:99:0,105,3321	0/0:6,0:6:15.05:0,15,499	0/1:34,0:22:4.71:5,0,422	0/0:44,0:33:41.69:0,42,947	1/1:1,15:16:15.34:145,15,0	1/1:3,19:20:21.07:455,21,0	1/1:4,16:20:17.87:299,18,0	1/1:3,9:12:23.97:318,24,0	1/1:5,6:11:21:397,21,0	1/1:3,9:12:27.08:542,27,0	1/1:2,12:14:14.76:280,15,0	1/1:2,8:10:15.01:280,15,0	1/1:0,16:16:30.10:622,30,0	1/1:0,9:9:9.03:195,9,0	0/0:15,0:15:39.13:0,39,1169	1/1:3,19:22:36.12:777,36,0	0/0:27,0:27:66.17:0,66,1879	1/1:6,12:18:15:279,15,0	1/1:5,7:10:24.08:498,24,0	1/1:4,12:15:29.94:512,30,0	1/1:4,15:19:3:65,3,0	1/1:1,18:19:27.02:512,27,0	1/1:3,15:18:18.06:390,18,0	0/1:6,18:24:0.33:0,0,0	1/1:0,8:8:12:215,12,0	1/1:2,12:14:36.06:661,36,0	1/1:4,11:16:30.03:603,30,0	1/1:3,11:14:24.08:521,24,0
chr10	91155344	.	C	CTCT	2387.32	PASS	AB=0.766;AC=18;AF=0.321;AN=56;BaseQRankSum=-2.107;DP=467;FS=37.823;HRun=0;HaplotypeScore=113.5589;InbreedingCoeff=0.6224;MQ=75.73;MQ0=0;MQRankSum=-2.342;QD=23.18;ReadPosRankSum=-5.115;VQSLOD=0.8492;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:75.20:0,75,1104	0/0:4,0:4:12.04:0,12,180	0/0:29,0:25:21.16:0,21,664	0/0:37,0:30:43.56:0,44,811	1/1:1,1:2:3.01:36,3,0	0/0:20,0:19:39.09:0,39,585	0/0:22,0:22:54.06:0,54,813	1/1:8,14:22:42.12:712,42,0	0/1:3,4:6:5.19:265,0,5	0/0:14,0:14:40.38:0,40,537	0/0:17,0:17:42:0,42,690	0/1:8,4:12:2.02:208,0,2	0/0:22,0:22:57.01:0,57,859	1/1:4,5:10:9.13:124,9,0	0/0:17,0:17:23.58:0,24,713	0/0:26,0:26:56.85:0,57,774	0/0:22,0:22:57.17:0,57,916	0/0:25,0:25:63.16:0,63,1052	0/1:8,2:10:36.61:306,0,37	1/1:6,2:8:17.82:200,18,0	1/1:5,3:8:5.29:57,5,0	0/0:19,0:19:48.04:0,48,766	0/0:11,0:11:12.04:0,12,201	0/0:35,0:35:80.98:0,81,1291	0/0:10,0:10:24.08:0,24,397	0/1:9,2:11:30.86:217,0,31	1/1:3,7:9:21.07:439,21,0	1/1:2,0:2:2.22:7,2,0
chr10	91155542	.	C	CG	6212.22	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-10.383;DP=554;FS=18.736;HRun=5;HaplotypeScore=57.4543;InbreedingCoeff=0.9701;MQ=78.52;MQ0=0;MQRankSum=-0.505;QD=32.70;ReadPosRankSum=-0.348;VQSLOD=2.9041;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,1318	0/0:1,0:1:3.01:0,3,32	0/0:11,0:11:24.04:0,24,247	0/0:22,0:22:43.31:0,43,431	0/0:19,0:19:51.13:0,51,547	1/1:0,18:18:48.16:632,48,0	1/1:3,27:30:78.25:1026,78,0	0/0:23,0:23:54.07:0,54,556	0/0:24,0:23:63.15:0,63,677	1/1:0,9:9:27.09:353,27,0	1/1:0,12:12:27.09:354,27,0	0/0:21,0:21:57.13:0,57,604	1/1:1,17:18:45.15:592,45,0	0/0:19,0:19:39.09:0,39,419	0/0:20,0:20:54.12:0,54,572	1/1:0,16:16:42.09:533,42,0	0/0:39,0:39:99:0,111,1174	1/1:3,18:21:51.17:671,51,0	0/0:25,0:25:60.12:0,60,629	0/0:14,0:14:39.10:0,39,417	0/0:38,0:38:90.19:0,90,956	1/1:1,19:20:42.14:552,42,0	1/1:2,12:14:33.11:434,33,0	1/1:0,19:19:51.17:671,51,0	1/1:0,13:13:30.10:395,30,0	0/0:19,0:19:48.12:0,48,515	0/0:20,0:19:51.13:0,51,547	0/0:5,0:5:12.03:0,12,129
chr10	91156303	.	T	TC	2001.04	PASS	AB=0.769;AC=19;AF=0.352;AN=54;BaseQRankSum=-2.554;DP=329;FS=7.160;HRun=8;HaplotypeScore=63.6715;InbreedingCoeff=0.7961;MQ=74.82;MQ0=1;MQRankSum=-3.160;QD=17.10;ReadPosRankSum=-0.984;VQSLOD=3.1351;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:38.66:0,39,326	0/0:2,0:2:3:0,3,27	0/0:9,0:10:7.28:0,7,99	0/0:5,0:4:0.48:0,0,25	1/1:1,6:7:18.05:204,18,0	0/0:15,0:15:33.02:0,33,301	0/0:25,0:25:56.52:0,57,581	0/1:7,3:9:9.42:148,0,9	1/1:2,3:5:15.04:173,15,0	0/0:11,0:11:17.95:0,18,155	0/0:6,0:6:15.01:0,15,136	1/1:7,4:11:29.99:297,30,0	0/0:11,0:11:6.33:0,6,194	1/1:8,10:18:42.03:441,42,0	0/0:8,0:8:21.01:0,21,192	0/0:13,0:13:36.02:0,36,329	0/0:25,0:25:54.86:0,55,541	0/0:15,0:15:27:0,27,247	1/1:6,5:11:15.04:173,15,0	./.	1/1:11,15:26:15.04:173,15,0	0/0:7,0:7:8.99:0,9,82	0/0:6,0:6:15.01:0,15,136	0/0:16,0:16:36.01:0,36,326	0/0:12,0:12:20.80:0,21,191	1/1:6,6:12:27.01:293,27,0	1/1:8,6:14:21.05:230,21,0	1/1:1,2:3:6.02:69,6,0
chr10	91156313	.	TAC	T	1150.59	PASS	AB=0.990;AC=25;AF=0.463;AN=54;BaseQRankSum=5.280;DP=293;FS=33.725;HRun=0;HaplotypeScore=61.6963;InbreedingCoeff=-0.3514;MQ=73.50;MQ0=1;MQRankSum=0.353;QD=5.07;ReadPosRankSum=7.682;VQSLOD=0.6843;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:59.88:0,60,751	0/0:2,0:2:3:0,3,25	0/0:8,0:8:12.34:0,12,208	0/1:4,0:3:2.15:2,0,34	0/1:6,0:6:31.36:62,0,31	0/1:13,0:13:44.06:67,0,44	0/1:25,0:25:63.33:63,0,171	0/1:10,0:9:27.42:27,0,37	0/1:8,0:8:22.65:26,0,23	0/1:7,0:7:36.95:76,0,37	1/1:6,1:7:13.68:95,14,0	0/1:11,0:11:28.48:28,0,55	0/1:11,1:12:63.09:79,0,63	0/1:14,0:14:64.45:64,0,67	0/0:8,0:8:19.69:0,20,254	0/1:13,1:14:15.64:93,0,16	0/0:28,0:28:82.16:0,82,1093	0/1:10,0:10:20.90:81,0,21	0/1:7,0:7:35.21:35,0,87	./.	0/1:16,1:17:28.01:39,0,28	0/1:6,0:6:0.98:1,0,30	0/1:7,0:7:12.59:29,0,13	1/1:16,1:17:41.45:225,41,0	0/1:9,0:9:5.70:51,0,6	0/1:13,0:13:67.02:80,0,67	1/1:8,0:8:12.07:82,12,0	0/1:2,0:2:4.90:5,0,14
chr10	91156314	.	ACC	A	3822.39	PASS	AB=0.831;AC=40;AF=0.769;AN=52;BaseQRankSum=1.415;DP=291;FS=37.175;HRun=10;HaplotypeScore=52.7732;InbreedingCoeff=0.4507;MQ=76.50;MQ0=1;MQRankSum=-1.610;QD=17.14;ReadPosRankSum=5.708;VQSLOD=-0.3733;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:20:41.09:0,41,555	./.	0/0:9,0:9:3.72:0,4,173	0/1:4,0:4:5.08:5,0,27	1/1:2,4:6:12.03:133,12,0	1/1:4,9:13:20.84:234,21,0	0/1:12,14:26:45.50:320,0,45	1/1:4,6:9:17.98:176,18,0	1/1:3,5:8:8.91:100,9,0	1/1:3,4:7:12.02:133,12,0	1/1:1,4:6:15.03:157,15,0	0/1:7,2:9:7.73:88,0,8	1/1:6,6:12:4.52:152,5,0	1/1:7,7:14:14.59:194,15,0	0/0:8,0:8:9.02:0,9,119	1/1:3,11:14:30.07:334,30,0	0/0:27,0:29:60.88:0,61,956	1/1:2,8:10:18.04:200,18,0	0/1:5,1:6:12.79:57,0,13	./.	1/1:12,5:17:14.60:166,15,0	1/1:3,3:6:3:33,3,0	1/1:2,5:7:12.02:134,12,0	1/1:1,16:17:45.12:501,45,0	1/1:2,6:8:21.05:228,21,0	1/1:5,7:12:21.03:232,21,0	1/1:3,4:8:20.07:211,20,0	1/1:1,1:2:3:33,3,0
chr10	91156323	.	CCA	C	679.93	PASS	AB=0.983;AC=27;AF=0.482;AN=56;BaseQRankSum=9.637;DP=278;FS=42.195;HRun=0;HaplotypeScore=55.2443;InbreedingCoeff=-0.1665;MQ=79.65;MQ0=1;MQRankSum=-0.225;QD=3.22;ReadPosRankSum=9.448;VQSLOD=-0.2636;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:53.71:0,54,647	0/0:4,0:4:9:0,9,90	0/0:8,0:8:12.74:0,13,299	0/0:7,0:6:0.89:0,1,64	1/1:4,0:4:10.49:47,10,0	0/1:10,1:11:0.13:71,0,0	0/1:24,0:24:87.04:87,0,96	0/1:10,0:9:16.33:24,0,16	0/1:7,0:7:14.84:15,0,15	0/1:6,0:6:17.69:18,0,37	0/1:7,0:7:9.43:58,0,9	0/1:11,0:11:5.34:5,0,110	0/1:8,0:8:11.27:26,0,11	0/1:11,0:11:7.73:41,0,8	0/0:5,0:5:9.01:0,9,107	1/1:13,0:13:0.73:61,1,0	0/0:25,0:25:65.77:0,66,910	1/1:8,0:8:14.85:60,15,0	0/1:8,0:8:5.24:5,0,30	0/1:2,0:2:2.03:2,0,20	0/1:17,2:19:11.39:11,0,92	1/1:3,0:3:3:26,3,0	0/1:8,0:8:17.12:17,0,54	1/1:18,0:18:15.66:123,16,0	0/1:7,1:8:5.44:68,0,5	0/1:12,0:12:31.98:32,0,81	0/1:10,0:10:33.04:39,0,33	0/1:3,0:3:3.97:4,0,19
chr10	91157206	.	A	ACC	4901.15	PASS	AB=0.941;AC=45;AF=0.804;AN=56;BaseQRankSum=-6.439;DP=350;FS=11.224;HRun=8;HaplotypeScore=47.1451;InbreedingCoeff=0.7096;MQ=79.62;MQ0=0;MQRankSum=-0.761;QD=18.78;ReadPosRankSum=-0.382;VQSLOD=1.5832;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.17:0,72,801	0/0:4,0:4:6:0,6,57	0/0:9,0:9:17.74:0,18,163	0/1:15,0:16:10.19:10,0,240	1/1:3,8:11:24.08:372,24,0	1/1:1,2:6:11.51:128,12,0	1/1:10,18:30:26.41:379,26,0	1/1:2,5:8:12:163,12,0	1/1:2,1:14:12.02:133,12,0	1/1:3,4:8:17.51:190,18,0	1/1:2,3:5:9.02:120,9,0	1/1:4,8:14:14.54:199,15,0	1/1:2,10:12:12.51:186,13,0	1/1:1,12:13:24.08:381,24,0	0/0:12,0:12:27.03:0,27,292	1/1:0,14:14:21.07:333,21,0	0/0:36,0:36:96.25:0,96,1070	1/1:2,13:16:29.59:437,30,0	1/1:2,5:8:17.51:220,18,0	1/1:2,1:3:3.01:48,3,0	1/1:2,14:17:27.09:428,27,0	1/1:1,4:5:9.03:142,9,0	1/1:2,5:7:6.02:95,6,0	1/1:3,14:17:24.08:381,24,0	1/1:2,4:9:3.01:48,3,0	1/1:5,5:11:11.24:116,11,0	1/1:1,6:7:6.02:95,6,0	1/1:6,3:10:21.06:296,21,0
chr10	91157309	.	AGGG	A	5697.60	PASS	AB=0.600;AC=23;AF=0.411;AN=56;BaseQRankSum=9.474;DP=448;FS=1.351;HRun=11;HaplotypeScore=95.3044;InbreedingCoeff=0.9239;MQ=68.49;MQ0=0;MQRankSum=-3.311;QD=27.93;ReadPosRankSum=2.864;VQSLOD=4.2058;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:42.12:0,42,727	0/0:5,0:6:12.02:0,12,191	0/0:10,0:10:14.99:0,15,172	0/0:9,0:5:3.88:0,4,118	0/0:5,0:13:29.90:0,30,269	1/1:2,19:21:51.16:670,51,0	1/1:6,18:24:48.14:631,48,0	0/0:10,0:18:32.92:0,33,280	0/0:2,0:12:26.90:0,27,207	1/1:0,16:16:45.15:591,45,0	1/1:3,12:15:33.05:414,33,0	0/0:4,0:18:41.84:0,42,321	1/1:1,14:15:38.93:512,39,0	0/0:5,0:19:44.82:0,45,343	0/0:21,0:21:41.73:0,42,789	1/1:1,13:14:27.07:355,27,0	0/0:21,0:24:48.14:0,48,925	1/1:1,17:18:51.16:670,51,0	0/0:3,0:18:45.57:0,46,375	0/0:2,0:14:32.87:0,33,253	0/0:4,0:20:44.83:0,45,346	1/1:3,17:20:45.09:559,45,0	1/1:2,13:15:36.11:469,36,0	1/1:4,7:11:30.10:392,30,0	1/1:3,11:14:33.10:434,33,0	0/1:7,1:21:0.52:1,0,262	0/0:4,0:14:35.87:0,36,277	0/0:1,0:4:8.97:0,9,69
chr10	91159029	.	CA	C	5044.06	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-8.019;DP=575;FS=0.344;HRun=10;HaplotypeScore=81.1388;InbreedingCoeff=0.9814;MQ=73.43;MQ0=2;MQRankSum=0.121;QD=21.93;ReadPosRankSum=0.081;VQSLOD=5.3867;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.14:0,57,623	0/0:11,0:11:30.08:0,30,332	0/0:30,0:21:32.55:0,33,330	0/0:16,0:14:16.68:0,17,157	1/1:1,23:24:62.97:547,63,0	0/0:6,0:22:39.17:0,39,217	0/0:5,1:15:8.52:0,9,150	1/1:5,18:23:50.96:443,51,0	1/1:3,19:22:53.99:469,54,0	0/0:3,0:17:34.43:0,34,162	0/0:1,0:18:42.76:0,43,223	1/1:2,18:20:53.99:468,54,0	0/0:3,0:19:28.41:0,28,142	1/1:4,16:20:50.98:440,51,0	0/0:15,0:15:33.08:0,33,357	0/0:5,1:20:14.04:0,14,170	0/0:33,0:33:90.23:0,90,988	0/0:3,0:14:25.52:0,26,127	1/1:4,16:20:47.98:416,48,0	1/1:0,26:26:65.96:573,66,0	1/1:1,13:14:35.99:313,36,0	0/0:6,0:25:40.02:0,40,210	0/0:4,0:17:36.89:0,37,186	0/0:4,0:31:62.62:0,63,318	0/0:3,0:19:42.94:0,43,244	1/1:4,29:34:72.55:698,73,0	1/1:1,22:23:65.98:573,66,0	1/1:0,4:4:12:104,12,0
chr10	91159172	.	CCACACA	C	2789.59	PASS	AB=0.674;AC=20;AF=0.357;AN=56;BaseQRankSum=-0.147;DP=578;FS=6.137;HRun=0;HaplotypeScore=136.0941;InbreedingCoeff=0.7860;MQ=61.32;MQ0=21;MQRankSum=-0.673;QD=14.61;ReadPosRankSum=0.323;VQSLOD=2.6265;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:29:56.85:0,57,988	0/0:8,0:8:18.04:0,18,446	0/0:44,0:20:7.04:0,7,205	0/0:50,0:25:20.90:0,21,438	1/1:9,11:19:14.78:164,15,0	0/0:4,0:25:15.05:0,15,385	0/0:7,0:18:9:0,9,103	0/1:14,8:22:2.31:264,0,2	1/1:6,9:16:14.63:243,15,0	0/0:19,0:18:35.92:0,36,472	0/0:18,0:18:14.27:0,14,120	1/1:5,7:10:11.75:243,12,0	0/0:6,0:16:8.71:0,9,252	1/1:3,11:13:26.82:525,27,0	0/0:14,0:17:30.10:0,30,832	0/0:3,0:14:9.03:0,9,231	0/0:21,0:22:57.14:0,57,1362	0/0:26,0:34:72.15:0,72,1598	1/1:4,12:15:32.91:338,33,0	0/1:6,10:16:9.53:245,0,10	1/1:22,16:35:2.92:51,3,0	0/0:6,0:15:17.60:0,18,260	0/0:12,0:12:12.15:0,12,269	0/0:15,0:29:23.92:0,24,500	0/0:10,0:11:15.03:0,15,352	1/1:9,5:12:18.02:258,18,0	1/1:4,11:15:20.59:430,21,0	1/1:4,4:8:12.04:231,12,0
chr10	91159507	.	GA	G	12989.59	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=6.590;DP=573;FS=1.773;HRun=5;HaplotypeScore=62.2458;InbreedingCoeff=0.9734;MQ=89.18;MQ0=0;MQRankSum=-5.722;QD=29.26;ReadPosRankSum=3.919;VQSLOD=5.3247;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.24:0,81,1072	0/0:8,0:8:21.04:0,21,255	0/0:27,1:28:33.99:0,34,739	0/0:22,0:21:43.92:0,44,463	1/1:1,22:23:60.13:664,60,0	1/1:1,17:18:39.11:442,39,0	1/1:1,19:20:39.11:442,39,0	1/1:1,25:26:72.16:794,72,0	1/1:0,16:16:45.13:510,45,0	1/1:0,24:24:72.19:803,72,0	1/1:0,22:22:57.16:644,57,0	1/1:1,24:25:72.21:816,72,0	1/1:1,16:17:39.11:442,39,0	1/1:2,16:18:48.14:544,48,0	0/0:29,0:29:84.27:0,84,1135	1/1:1,29:30:87.25:986,87,0	0/0:13,0:13:6.96:0,7,460	1/1:0,19:19:54.15:611,54,0	1/1:0,22:22:66.10:731,66,0	1/1:3,15:18:39.04:426,39,0	1/1:0,7:7:11.18:134,11,0	1/1:0,14:14:33.09:371,33,0	1/1:0,11:11:33.09:373,33,0	1/1:1,12:13:30.09:340,30,0	1/1:1,29:30:69.20:782,69,0	1/1:1,22:23:66.17:738,66,0	1/1:2,29:31:72.21:816,72,0	1/1:0,17:17:51.15:578,51,0
chr10	91161029	.	TA	T	3497.99	PASS	AB=0.721;AC=43;AF=0.768;AN=56;BaseQRankSum=2.114;DP=362;FS=0.592;HRun=12;HaplotypeScore=38.5044;InbreedingCoeff=0.5094;MQ=69.86;MQ0=9;MQRankSum=2.342;QD=12.36;ReadPosRankSum=1.759;VQSLOD=2.8933;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,1:20:27.86:0,28,462	0/0:8,0:8:12.02:0,12,122	0/0:24,0:10:10.88:0,11,98	0/1:17,0:8:0.65:1,0,22	1/1:1,8:9:14.91:116,15,0	1/1:2,12:15:15.46:195,15,0	1/1:2,10:12:26.89:209,27,0	1/1:2,11:14:34.86:257,35,0	1/1:0,12:13:28.93:215,29,0	1/1:3,5:8:14.93:116,15,0	1/1:0,11:11:14.89:116,15,0	1/1:4,8:12:14.91:116,15,0	0/1:4,5:8:18.61:58,0,19	1/1:6,5:11:14.92:116,15,0	0/1:5,2:7:11.21:11,0,79	0/1:4,7:10:6.66:139,0,7	0/0:25,1:26:36.87:0,37,549	1/1:4,19:25:48.90:360,49,0	1/1:5,13:17:38.72:294,39,0	1/1:1,6:6:14.93:116,15,0	1/1:2,8:10:11.95:93,12,0	1/1:0,4:4:5.97:46,6,0	1/1:2,6:8:8.96:70,9,0	0/1:2,6:8:8.62:118,0,9	1/1:5,9:13:20.91:162,21,0	1/1:3,6:9:13.97:99,14,0	1/1:5,23:28:48.45:430,48,0	1/1:0,2:2:5.98:46,6,0
chr10	91161134	.	C	CAA	1853.15	PASS	AB=0.940;AC=25;AF=0.446;AN=56;BaseQRankSum=0.675;DP=527;FS=6.040;HRun=15;HaplotypeScore=85.0823;InbreedingCoeff=0.6634;MQ=54.95;MQ0=35;MQRankSum=-1.119;QD=7.50;ReadPosRankSum=-1.313;VQSLOD=0.7950;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:40.99:0,41,344	0/0:11,0:12:11.38:0,11,161	0/1:14,0:7:11.47:11,0,17	0/0:15,0:7:5.74:0,6,77	0/0:22,0:30:61.28:0,61,406	1/1:8,9:17:20.43:237,20,0	1/1:7,3:11:8.39:85,8,0	0/0:21,0:20:25.73:0,26,225	0/1:10,0:11:13.43:13,0,80	1/1:4,10:15:32.39:343,32,0	1/1:21,4:24:34.45:359,34,0	0/0:18,0:20:28.79:0,29,254	0/1:5,0:5:0:0,0,0	0/0:14,0:14:28.70:0,29,184	0/0:15,0:14:23.31:0,23,171	1/1:10,3:16:13.90:131,14,0	0/0:29,0:28:64.91:0,65,490	1/1:15,7:22:13.73:269,14,0	0/1:12,0:12:3.50:3,0,159	0/0:15,0:23:25.01:0,25,230	0/0:13,0:12:17.89:0,18,181	1/1:7,1:9:13.58:138,14,0	1/1:6,8:15:20.18:174,20,0	1/1:4,3:10:18.51:148,19,0	1/1:13,5:19:2.90:137,3,0	0/1:21,0:23:2.01:2,0,174	0/0:23,1:24:7.56:0,8,280	0/0:22,0:19:15.61:0,16,233
chr10	91162002	.	C	CTTTATTTA	6783.31	PASS	AB=0.806;AC=22;AF=0.393;AN=56;BaseQRankSum=-6.926;DP=465;FS=0.533;HRun=0;HaplotypeScore=117.3247;InbreedingCoeff=0.7317;MQ=63.87;MQ0=1;MQRankSum=-9.275;QD=40.86;ReadPosRankSum=0.382;VQSLOD=4.3370;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:81.28:0,81,2055	0/0:5,0:5:15.05:0,15,378	0/0:18,0:16:21.04:0,21,508	0/0:15,0:11:6.02:0,6,131	0/0:17,0:17:24.08:0,24,580	1/1:5,9:15:15.05:627,15,0	1/1:10,0:10:15.01:243,15,0	0/0:39,0:39:99:0,99,2234	0/0:14,0:14:33.07:0,33,766	1/1:9,11:20:33.11:1263,33,0	1/1:6,15:21:39.13:1482,39,0	0/0:7,0:7:6.02:0,6,156	1/1:5,2:7:9.03:360,9,0	0/0:8,0:8:15.05:0,15,390	0/0:19,0:19:33.10:0,33,753	1/1:7,6:13:12.04:502,12,0	0/0:26,0:26:57.20:0,57,1449	0/1:6,7:13:56.85:732,0,57	0/0:25,0:25:45.15:0,45,1125	0/0:17,0:17:24.08:0,24,613	0/0:5,0:5:9.03:0,9,234	1/1:6,2:7:3.01:125,3,0	1/1:8,2:9:6.02:251,6,0	1/1:4,3:7:6.02:251,6,0	1/1:6,10:16:21.07:878,21,0	0/1:24,1:25:70.49:70,0,1226	0/0:27,0:27:39.12:0,39,951	0/0:20,0:20:45.15:0,45,1139
chr10	91162062	.	CCTTGCG	C	8769.65	PASS	AB=0.546;AC=19;AF=0.365;AN=52;BaseQRankSum=12.472;DP=416;FS=3.843;HRun=0;HaplotypeScore=98.0204;InbreedingCoeff=0.7376;MQ=45.16;MQ0=11;MQRankSum=-11.833;QD=50.11;ReadPosRankSum=-0.182;VQSLOD=4.8276;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:78.27:0,78,2734	0/0:5,0:5:15.05:0,15,455	./.	./.	1/1:0,26:26:63.22:1451,63,0	0/0:23,0:22:54.19:0,54,1827	0/0:21,0:16:42.14:0,42,1407	1/1:6,14:18:42.10:878,42,0	0/1:2,14:16:65.58:790,0,66	0/0:20,0:18:48.16:0,48,1630	0/0:16,0:16:45.15:0,45,1513	0/1:1,8:9:80.39:459,0,80	0/0:9,0:9:24.08:0,24,837	1/1:2,9:11:27.09:620,27,0	0/0:16,0:16:45.15:0,45,1576	0/0:11,0:10:30.10:0,30,1042	0/0:24,0:24:69.24:0,69,2350	0/0:15,0:15:42.14:0,42,1400	1/1:5,12:15:36.10:784,36,0	1/1:1,16:17:48.16:1074,48,0	1/1:4,5:9:8.86:207,9,0	0/0:14,0:12:36.12:0,36,1215	0/0:14,0:13:30.10:0,30,1001	0/0:9,0:9:27.09:0,27,946	0/0:12,0:12:30.10:0,30,962	0/1:5,14:18:59.49:916,0,59	1/1:3,14:16:39.13:898,39,0	1/1:3,11:14:30.10:691,30,0
chr10	91162210	.	CCACACACA	C	2097.34	PASS	AB=0.773;AC=20;AF=0.385;AN=52;BaseQRankSum=6.311;DP=504;FS=7.056;HRun=0;HaplotypeScore=118.7647;InbreedingCoeff=0.7368;MQ=52.02;MQ0=22;MQRankSum=-6.735;QD=12.27;ReadPosRankSum=0.371;VQSLOD=2.0799;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:51.17:0,51,1535	0/0:8,0:8:21.07:0,21,813	./.	./.	0/0:25,0:27:51.17:0,51,1757	1/1:12,7:19:12.04:228,12,0	1/1:10,10:20:10.93:189,11,0	0/0:22,0:17:6.02:0,6,170	0/0:20,0:20:45.15:0,45,1616	0/1:13,4:19:4.14:236,0,4	1/1:4,6:9:6.02:130,6,0	0/0:14,0:15:18.06:0,18,679	1/1:8,6:14:15.05:341,15,0	0/0:12,0:14:12.02:0,12,387	0/0:17,0:21:36.11:0,36,1202	1/1:2,10:12:18.06:453,18,0	0/0:30,0:34:66.23:0,66,2273	1/1:13,3:14:6.02:151,6,0	0/0:15,0:12:13.60:0,14,340	0/0:14,0:14:27.07:0,27,779	0/0:17,0:15:24.08:0,24,613	1/1:10,6:15:9.03:227,9,0	1/1:8,0:7:0.94:1,1,0	0/1:16,5:20:57.24:81,0,57	1/1:5,7:13:12:247,12,0	0/0:20,0:18:36.12:0,36,1191	0/0:8,0:18:12.51:0,13,379	0/0:8,0:10:21.07:0,21,769
chr10	91164771	.	GA	G	5148	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=0.046;DP=574;FS=11.431;HRun=10;HaplotypeScore=86.9199;InbreedingCoeff=0.9094;MQ=84.84;MQ0=1;MQRankSum=1.831;QD=19.35;ReadPosRankSum=1.914;VQSLOD=5.0243;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.10:0,90,931	0/0:8,0:9:26.86:0,27,266	0/0:28,0:28:12.82:0,13,264	0/1:17,0:16:1.32:1,0,183	1/1:3,14:17:41.94:357,42,0	0/0:17,1:18:22.11:0,22,472	0/0:18,0:18:48.13:0,48,531	1/1:3,24:27:41.72:576,42,0	1/1:3,15:18:38.98:339,39,0	0/0:16,0:16:39.11:0,39,431	0/0:4,0:4:9.02:0,9,100	1/1:4,18:22:41.98:365,42,0	0/0:17,0:17:42.11:0,42,464	1/1:3,20:23:56.98:495,57,0	0/0:23,2:25:14.03:0,14,598	0/0:27,0:27:69.16:0,69,747	0/0:23,0:23:57.09:0,57,599	0/0:26,0:27:71.98:0,72,761	1/1:6,24:30:65.94:568,66,0	1/1:3,16:19:44.98:391,45,0	1/1:2,25:27:68.98:599,69,0	0/0:10,0:10:23.98:0,24,238	0/0:11,1:12:1:0,1,224	0/0:25,0:25:57.04:0,57,581	0/0:16,0:16:48.12:0,48,523	1/1:4,30:34:29.55:702,30,0	1/1:2,19:21:56.98:495,57,0	1/1:1,10:11:29.98:260,30,0
chr10	91166155	.	C	CAG	9308.19	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.833;DP=680;FS=1.865;HRun=0;HaplotypeScore=109.7954;InbreedingCoeff=0.9996;MQ=83.90;MQ0=1;MQRankSum=-3.690;QD=36.08;ReadPosRankSum=1.532;VQSLOD=7.1746;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:65:99:0,181,2289	0/0:14,0:14:30.10:0,30,382	0/0:37,0:35:63.05:0,63,730	0/0:30,0:27:31.40:0,31,581	0/0:17,0:17:36.12:0,36,458	1/1:5,16:21:51.17:838,51,0	1/1:5,23:29:58.10:1139,58,0	0/0:23,0:23:39.20:0,39,705	0/0:24,0:24:60.19:0,60,760	1/1:5,25:30:81.28:1340,81,0	1/1:4,12:17:30.10:502,30,0	0/0:17,0:17:42.13:0,42,534	1/1:6,12:18:33.11:552,33,0	0/0:17,0:17:45.14:0,45,573	0/0:34,0:34:96.30:0,96,1210	1/1:3,22:26:63.22:1054,63,0	0/0:19,0:19:57.18:0,57,724	1/1:6,16:22:45.15:753,45,0	0/0:17,0:17:45.12:0,45,548	0/0:22,0:22:54.16:0,54,674	0/0:20,0:19:39.12:0,39,496	1/1:8,17:25:42.14:687,42,0	1/1:6,12:19:33.11:545,33,0	1/1:4,25:29:57.62:1000,58,0	1/1:3,19:22:54.03:900,54,0	0/0:32,1:33:34.03:0,34,970	0/0:18,0:18:51.16:0,51,649	0/0:15,0:15:42.13:0,42,532
chr10	91167128	.	GCACACA	G	2135.90	PASS	AB=0.692;AC=21;AF=0.389;AN=54;BaseQRankSum=5.066;DP=653;FS=8.439;HRun=0;HaplotypeScore=142.1382;InbreedingCoeff=0.7866;MQ=68.52;MQ0=4;MQRankSum=-7.288;QD=8.94;ReadPosRankSum=-0.305;VQSLOD=1.8206;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:49:60.20:0,60,1522	0/0:7,0:7:15.03:0,15,405	./.	0/0:31,0:23:3.48:0,3,72	0/0:12,0:12:3.01:0,3,89	1/1:15,9:25:15.94:294,16,0	1/1:17,10:30:18.03:288,18,0	0/0:24,0:24:22.01:0,22,507	0/0:16,0:26:21.07:0,21,560	1/1:19,4:24:14.06:216,14,0	1/1:10,2:13:6.01:87,6,0	0/0:10,0:20:8.83:0,9,235	1/1:11,2:13:6.02:122,6,0	0/0:12,0:19:21.05:0,21,528	0/0:23,0:24:42.14:0,42,1135	1/1:11,12:26:39.13:716,39,0	0/0:29,0:36:72.24:0,72,1947	1/1:14,9:23:11.73:224,12,0	0/0:10,0:16:18.53:0,19,493	0/0:9,0:15:9.01:0,9,196	0/0:33,0:52:30.10:0,30,745	1/1:13,4:18:2.96:42,3,0	0/1:10,7:18:0.47:0,0,1	1/1:26,6:32:3:55,3,0	1/1:8,5:14:18.01:282,18,0	0/0:16,0:22:36.12:0,36,981	0/0:10,0:16:9.03:0,9,176	0/0:7,0:13:9.50:0,10,218
chr10	91167775	.	TC	T	4672.34	PASS	AB=0.957;AC=34;AF=0.607;AN=56;BaseQRankSum=3.592;DP=485;FS=2.365;HRun=10;HaplotypeScore=61.3016;InbreedingCoeff=0.6837;MQ=82.51;MQ0=0;MQRankSum=-3.690;QD=14.69;ReadPosRankSum=3.314;VQSLOD=5.2685;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:33:56.98:494,57,0	1/1:5,6:11:17.98:156,18,0	0/0:18,0:18:29.99:0,30,296	0/0:17,0:18:10.19:0,10,238	1/1:4,10:14:29.99:260,30,0	0/0:16,0:15:36.07:0,36,379	0/0:23,2:25:11.02:0,11,552	1/1:9,15:24:44.84:366,45,0	1/1:6,10:16:35.91:301,36,0	0/0:11,1:12:4.12:0,4,267	0/1:8,0:8:4.38:4,0,148	1/1:3,5:9:17.03:136,17,0	0/1:16,1:17:25:25,0,204	1/1:1,17:19:50.03:422,50,0	1/1:2,17:20:47.02:397,47,0	0/0:19,1:20:25.08:0,25,496	1/1:3,20:23:47.98:417,48,0	0/1:14,1:15:18.28:18,0,266	1/1:6,5:11:17.95:144,18,0	1/1:2,6:9:23.02:187,23,0	1/1:7,27:34:74.97:650,75,0	0/1:17,1:18:14.89:15,0,296	0/0:11,0:11:27.07:0,27,298	0/0:28,1:29:25.08:0,25,496	0/0:18,0:18:42.09:0,42,447	1/1:3,9:12:28.24:237,28,0	1/1:3,14:17:35.94:312,36,0	1/1:3,5:8:14.97:130,15,0
chr10	91167832	.	GCA	G	3202.72	PASS	AB=0.793;AC=23;AF=0.411;AN=56;BaseQRankSum=-2.525;DP=611;FS=0.920;HRun=0;HaplotypeScore=103.7601;InbreedingCoeff=0.5924;MQ=66.07;MQ0=13;MQRankSum=2.811;QD=11.44;ReadPosRankSum=3.705;VQSLOD=3.3680;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,1:27:13.89:14,0,639	0/1:5,1:7:33.20:33,0,99	0/0:33,0:13:3.01:0,3,46	0/0:34,0:22:14.50:0,15,135	0/0:19,0:26:30:0,30,292	1/1:6,16:21:27.08:306,27,0	0/1:14,14:30:7.46:327,0,7	0/0:20,0:23:24.41:0,24,223	0/0:12,0:23:42:0,42,384	0/1:17,6:23:28.72:275,0,29	1/1:3,5:7:12.03:136,12,0	0/0:7,0:22:20.01:0,20,161	1/1:0,13:14:29.75:300,30,0	0/0:17,0:25:39.01:0,39,373	0/0:23,0:23:42.14:0,42,645	1/1:9,8:20:35.58:339,36,0	0/1:23,8:31:99:206,0,575	1/1:4,11:16:32.93:354,33,0	0/0:16,0:18:23.41:0,23,191	0/0:11,0:16:23.99:0,24,206	0/0:31,0:35:41.96:0,42,389	1/1:7,12:20:29.54:320,30,0	1/1:6,3:9:15.02:158,15,0	1/1:9,26:35:41.95:457,42,0	1/1:6,4:11:19.44:185,19,0	0/0:16,1:20:5.85:0,6,322	0/0:13,0:19:36.03:0,36,366	0/0:4,0:7:12:0,12,104
chr10	91167917	.	G	GCACACACA	10541.76	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=5.259;DP=612;FS=5.656;HRun=0;HaplotypeScore=201.9752;InbreedingCoeff=0.8520;MQ=47.63;MQ0=6;MQRankSum=-7.500;QD=23.80;ReadPosRankSum=-3.781;VQSLOD=3.3447;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:43:95.08:0,95,1959	0/0:9,0:10:21.07:0,21,486	0/0:35,0:15:11.52:0,12,193	0/0:33,0:15:9:0,9,106	1/1:9,2:14:11.97:361,12,0	1/1:12,2:16:15.05:360,15,0	1/1:19,4:29:12.04:368,12,0	1/1:26,0:25:30.07:530,30,0	1/1:9,9:20:24.08:938,24,0	1/1:16,0:29:44.72:881,45,0	1/1:15,0:17:12.50:174,13,0	1/1:20,2:23:23.93:630,24,0	1/1:9,0:13:18.51:439,19,0	1/1:10,4:17:24.01:793,24,0	0/0:20,0:20:38.95:0,39,809	1/1:8,0:18:17.40:395,17,0	0/0:26,0:28:69.11:0,69,1570	1/1:9,1:14:18.06:570,18,0	1/1:20,0:19:24.08:571,24,0	1/1:13,4:17:24.08:726,24,0	1/1:22,0:22:12.04:174,12,0	1/1:24,0:23:15.05:402,15,0	1/1:8,0:12:6.02:124,6,0	1/1:21,0:26:14.78:212,15,0	1/1:11,0:19:6.95:150,7,0	1/1:22,3:25:5.83:654,6,0	1/1:23,5:30:29.62:1063,30,0	1/1:7,0:7:2.99:24,3,0
chr10	91168364	.	CCTCTCTCTCTCT	C	1160.19	PASS	AB=0.981;AC=13;AF=0.310;AN=42;BaseQRankSum=2.611;DP=511;FS=10.202;HRun=0;HaplotypeScore=163.3697;InbreedingCoeff=0.3522;MQ=68.53;MQ0=23;MQRankSum=-2.277;QD=8.23;ReadPosRankSum=1.596;VQSLOD=2.2543;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:21.06:0,21,711	0/0:12,0:12:3.01:0,3,52	0/0:26,0:20:3.01:0,3,44	./.	./.	0/0:16,0:15:9.82:0,10,238	0/0:26,0:24:15.04:0,15,518	./.	1/1:12,2:15:2.99:25,3,0	0/1:16,1:16:66.94:67,0,400	0/0:10,0:9:3.01:0,3,50	./.	0/0:9,0:9:3.01:0,3,63	1/1:14,3:17:6:121,6,0	0/1:20,0:19:54.15:54,0,198	0/0:19,0:18:9.02:0,9,143	0/0:24,0:22:18.20:0,18,383	0/0:20,0:19:21.89:0,22,628	1/1:7,2:9:5.99:203,6,0	./.	./.	0/0:20,0:19:9.02:0,9,180	0/0:17,0:19:2.97:0,3,20	0/0:11,0:10:9.03:0,9,191	0/1:18,0:18:53.99:54,0,62	1/1:16,10:27:24.36:652,24,0	1/1:13,2:15:6:125,6,0	./.
chr10	91168414	.	TCACACACACA	T	991.68	PASS	AB=0.963;AC=26;AF=0.542;AN=48;BaseQRankSum=4.129;DP=409;FS=1.036;HRun=0;HaplotypeScore=123.4854;InbreedingCoeff=0.2570;MQ=38.58;MQ0=45;MQRankSum=-0.929;QD=4.17;ReadPosRankSum=-0.543;VQSLOD=2.2417;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:25:1:0,1,259	0/0:10,0:9:15.52:0,16,600	./.	./.	1/1:8,2:9:0.47:1,0,0	1/1:10,0:12:2.39:10,2,0	0/1:20,0:17:11.45:11,0,51	0/0:12,0:11:0:0,0,0	1/1:14,5:16:8.28:251,8,0	0/1:17,0:15:43.79:44,0,107	0/0:6,0:7:0:0,0,0	1/1:14,4:17:6.36:173,6,0	0/0:9,0:9:9.03:0,9,181	1/1:15,0:17:1.68:36,2,0	0/0:20,0:17:27.09:0,27,1009	0/1:14,0:12:17.18:17,0,79	0/0:18,0:15:21.54:0,22,642	0/1:14,0:16:99:163,0,135	1/1:6,1:7:2.70:76,3,0	0/0:10,2:16:0:0,0,0	./.	./.	1/1:12,0:11:2.84:14,3,0	1/1:16,0:19:1.57:9,2,0	0/0:14,0:12:7.66:0,8,77	1/1:22,0:22:5.86:110,6,0	1/1:10,7:15:4.48:131,4,0	1/1:6,0:4:3.48:86,3,0
chr10	91169971	.	G	GAAA	5927.35	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=4.071;DP=573;FS=10.525;HRun=12;HaplotypeScore=123.1782;InbreedingCoeff=0.8257;MQ=71.44;MQ0=1;MQRankSum=-1.716;QD=13.38;ReadPosRankSum=-4.439;VQSLOD=1.0337;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:37:76.13:0,76,808	0/0:9,0:9:14.93:0,15,167	0/0:18,0:11:2.59:0,3,33	0/0:14,0:10:11.81:0,12,88	1/1:10,16:26:41.77:459,42,0	1/1:3,0:18:26.36:185,26,0	1/1:3,0:16:23.98:167,24,0	1/1:8,7:17:33.01:439,33,0	1/1:2,8:13:24.05:363,24,0	1/1:9,0:19:30.54:215,31,0	1/1:4,0:14:20.55:123,21,0	1/1:8,10:23:18.62:224,19,0	1/1:4,1:15:24.23:227,24,0	1/1:2,12:16:18:298,18,0	0/0:24,0:24:38.74:0,39,419	1/1:7,0:25:2.23:218,2,0	0/0:25,0:27:46.33:0,46,508	1/1:8,1:24:1.85:212,2,0	1/1:7,12:21:41.13:592,41,0	1/1:13,12:26:47.79:493,48,0	1/1:5,13:20:15.48:239,15,0	1/1:6,0:23:34.76:241,35,0	1/1:7,0:20:14.23:97,14,0	1/1:4,0:19:13.20:95,13,0	1/1:9,0:22:20.39:138,20,0	1/1:10,11:21:39.17:414,39,0	1/1:10,20:32:34.03:432,34,0	1/1:5,7:12:3.01:55,3,0
chr10	91170632	.	TC	T	4064.67	PASS	AC=36;AF=0.667;AN=54;BaseQRankSum=4.083;DP=195;FS=9.712;HRun=5;HaplotypeScore=30.7455;InbreedingCoeff=0.7009;MQ=77.30;MQ0=0;MQRankSum=-4.533;QD=28.83;ReadPosRankSum=1.045;VQSLOD=2.6740;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.14:0,51,677	0/0:1,0:1:3.01:0,3,41	0/0:6,0:6:7.89:0,8,154	0/0:7,0:6:6.47:0,6,101	1/1:0,9:9:27.08:306,27,0	1/1:0,1:1:3.01:34,3,0	1/1:0,7:7:21.06:235,21,0	1/1:1,8:9:23.93:252,24,0	1/1:1,6:7:18.03:192,18,0	0/0:0,1:1:0:0,0,0	0/0:0,1:1:0:0,0,0	1/1:0,12:12:36.10:408,36,0	./.	1/1:1,12:13:30.09:340,30,0	0/0:4,0:4:9.03:0,9,123	1/1:0,1:1:3.01:34,3,0	0/0:13,0:13:39.13:0,39,532	1/1:0,4:4:12.03:134,12,0	1/1:0,10:10:30.07:329,30,0	1/1:1,5:6:15.04:170,15,0	1/1:4,29:32:78.22:883,78,0	1/1:1,3:4:2.36:33,2,0	0/0:0,4:4:0:0,0,1	1/1:0,2:2:6.02:66,6,0	1/1:1,3:4:8.89:83,9,0	1/1:0,8:8:21.03:226,21,0	1/1:0,7:7:18.05:203,18,0	1/1:0,4:4:12.03:136,12,0
chr10	91171988	.	TTATC	T	6195.60	PASS	AB=1.000;AC=49;AF=0.980;AN=50;BaseQRankSum=0.005;DP=589;FS=1.794;HRun=0;HaplotypeScore=147.6015;InbreedingCoeff=-0.0408;MQ=67.23;MQ0=2;MQRankSum=0.143;QD=11.62;ReadPosRankSum=0.854;VQSLOD=4.4973;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:31:14.85:126,15,0	1/1:9,0:16:15.01:139,15,0	./.	./.	1/1:18,0:18:24.08:363,24,0	1/1:9,5:18:18.04:220,18,0	1/1:13,2:15:3.01:45,3,0	./.	1/1:24,0:24:21.07:318,21,0	1/1:14,10:24:30.08:415,30,0	1/1:11,6:17:14.91:150,15,0	1/1:25,0:25:21.06:300,21,0	1/1:11,8:19:21.07:318,21,0	1/1:17,0:17:24.08:363,24,0	1/1:15,15:30:27.09:409,27,0	1/1:13,14:27:30.57:455,31,0	1/1:19,11:30:15.05:227,15,0	1/1:7,9:16:15.05:227,15,0	1/1:19,0:18:9.03:136,9,0	1/1:17,0:17:21.05:280,21,0	0/1:25,0:25:95.74:96,0,157	1/1:16,10:26:29.99:401,30,0	1/1:8,0:25:12.21:113,12,0	1/1:8,0:16:8.58:70,9,0	1/1:9,0:22:12.78:159,13,0	1/1:19,0:19:18.05:255,18,0	1/1:27,0:27:30.06:429,30,0	1/1:9,0:9:12.04:182,12,0
chr10	91171993	.	TATC	T	1347.79	PASS	AB=0.880;AC=19;AF=0.339;AN=56;BaseQRankSum=13.993;DP=558;FS=25.081;HRun=0;HaplotypeScore=143.7720;InbreedingCoeff=-0.4799;MQ=66.00;MQ0=2;MQRankSum=-1.845;QD=3.52;ReadPosRankSum=0.273;VQSLOD=1.0364;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:1.06:1,0,421	0/1:12,0:12:31.69:32,0,148	0/0:12,0:10:7.75:0,8,306	0/0:7,0:7:20.94:0,21,216	0/1:8,8:16:75.62:188,0,76	0/1:17,0:17:34.11:34,0,268	0/0:13,0:13:28.66:0,29,422	0/0:32,0:31:82.70:0,83,454	0/1:15,7:22:99:154,0,149	0/0:24,0:24:12.26:0,12,513	0/0:16,0:16:30.10:0,30,434	0/1:20,5:25:99:132,0,190	0/1:19,0:19:4.09:4,0,294	0/1:7,8:15:56.76:206,0,57	0/1:29,0:29:0.66:1,0,449	0/1:27,0:27:5.59:6,0,446	0/0:29,0:29:32.01:0,32,668	0/0:17,0:17:2.03:0,2,261	0/1:12,3:14:56.41:56,0,140	0/1:13,5:18:81.62:133,0,82	0/1:21,2:23:16.56:17,0,395	0/0:25,0:25:6.51:0,7,454	0/1:24,0:24:31.29:31,0,256	0/1:14,0:13:6.14:6,0,139	0/1:22,0:21:99:100,0,243	0/1:14,5:19:99:112,0,103	0/1:18,10:28:99:190,0,186	0/1:6,3:9:38.30:94,0,38
chr10	91174243	.	G	GGTTTGTTT	9448	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=-6.285;DP=617;FS=3.279;HRun=0;HaplotypeScore=155.0123;InbreedingCoeff=0.7356;MQ=60.18;MQ0=2;MQRankSum=-9.081;QD=31.08;ReadPosRankSum=-4.922;VQSLOD=3.9261;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:99:0,100,2152	0/0:10,0:10:27.08:0,27,591	0/0:21,0:19:14:0,14,339	0/0:23,0:22:27.08:0,27,489	0/0:17,0:17:27.78:0,28,548	1/1:5,12:18:12.04:499,12,0	1/1:7,18:28:18.06:752,18,0	0/1:29,0:29:24.12:24,0,550	0/0:15,0:15:7.12:0,7,609	1/1:9,19:29:39.03:1190,39,0	1/1:3,5:9:18.06:664,18,0	0/1:22,0:22:34.31:34,0,636	1/1:5,12:20:21.07:876,21,0	0/0:16,0:16:33.17:0,33,598	0/0:23,0:23:47.73:0,48,986	1/1:3,10:15:12.04:501,12,0	0/0:41,0:41:84.23:0,84,1859	1/1:2,7:9:9.03:376,9,0	0/1:27,0:27:61.35:61,0,360	0/0:8,0:8:13.90:0,14,260	0/0:38,0:38:13.04:0,13,1101	1/1:2,15:17:42.14:1514,42,0	1/1:5,11:18:21.07:787,21,0	1/1:12,25:37:38.75:1419,39,0	1/1:6,16:25:18.06:750,18,0	0/0:21,0:21:11.81:0,12,566	0/0:16,0:16:26.46:0,26,520	0/0:15,0:15:17.33:0,17,366
chr10	91175554	.	GA	G	1339.76	PASS	AB=0.993;AC=35;AF=0.625;AN=56;BaseQRankSum=11.453;DP=414;FS=9.316;HRun=1;HaplotypeScore=73.3131;InbreedingCoeff=0.2136;MQ=87.74;MQ0=0;MQRankSum=-2.563;QD=4.32;ReadPosRankSum=5.057;VQSLOD=0.1278;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.29:0,87,1232	0/0:6,0:6:18.06:0,18,253	0/0:16,1:17:13.23:0,13,303	0/0:15,0:15:21.14:0,21,390	1/1:13,0:13:0.29:50,0,0	0/1:7,0:7:10.85:22,0,11	1/1:21,0:21:18.74:105,19,0	0/1:15,1:16:39.15:39,0,62	1/1:20,0:20:46.09:158,46,0	0/1:14,0:14:31.20:31,0,38	0/1:8,0:8:27.79:28,0,31	0/1:19,0:19:5.48:82,0,5	1/1:18,1:19:1.93:119,2,0	1/1:12,0:12:2.86:73,3,0	0/0:18,0:18:46.11:0,46,702	1/1:11,0:11:21.29:68,21,0	0/0:17,0:17:48.07:0,48,605	1/1:11,0:11:0.28:39,0,0	0/1:11,0:11:30.92:41,0,31	1/1:8,0:8:15.66:52,16,0	1/1:35,0:35:1.19:145,1,0	0/1:11,0:11:30.93:31,0,52	0/1:9,0:9:3.43:43,0,3	1/1:13,0:13:26.91:89,27,0	1/1:11,0:11:20.06:70,20,0	1/1:16,1:17:24.69:93,25,0	0/1:17,0:17:10.50:73,0,11	1/1:7,0:7:17.48:68,17,0
chr10	91175555	.	AG	A	8532.15	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=6.615;DP=410;FS=1.516;HRun=6;HaplotypeScore=48.7510;InbreedingCoeff=0.9304;MQ=87.97;MQ0=0;MQRankSum=-3.714;QD=27.88;ReadPosRankSum=0.449;VQSLOD=5.1457;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.27:0,90,1166	0/0:6,0:6:18.03:0,18,219	0/0:18,0:17:1.69:0,2,213	0/0:14,1:15:8.65:0,9,267	1/1:0,12:12:30.07:322,30,0	1/1:2,6:8:15.03:160,15,0	1/1:1,20:21:57.14:613,57,0	1/1:5,12:17:39.06:396,39,0	1/1:0,20:20:60.15:645,60,0	1/1:2,12:14:30.07:322,30,0	1/1:1,6:7:18.05:193,18,0	1/1:1,17:18:51.13:548,51,0	1/1:3,16:19:51.12:546,51,0	1/1:1,11:12:33.08:354,33,0	0/0:17,1:18:18.91:0,19,586	1/1:0,11:11:30.08:322,30,0	0/0:16,0:16:42.11:0,42,523	1/1:1,10:11:27.07:290,27,0	1/1:1,9:10:24.06:257,24,0	1/1:1,7:8:21.05:226,21,0	1/1:2,32:34:87.22:935,87,0	1/1:3,8:11:21:226,21,0	1/1:1,8:9:24.06:258,24,0	1/1:0,13:13:36.09:387,36,0	1/1:0,11:11:27.07:290,27,0	1/1:1,16:17:51.10:531,51,0	1/1:1,15:16:45.11:484,45,0	1/1:0,7:7:21.05:226,21,0
chr10	91176401	.	C	CTAT	5718.51	PASS	AB=0.950;AC=21;AF=0.389;AN=54;BaseQRankSum=-5.710;DP=456;FS=4.036;HRun=0;HaplotypeScore=64.0572;InbreedingCoeff=0.8717;MQ=71.62;MQ0=0;MQRankSum=0.059;QD=33.44;ReadPosRankSum=0.603;VQSLOD=5.0103;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:90.27:0,90,1256	0/0:6,0:6:6.02:0,6,86	0/0:12,0:10:18.04:0,18,223	0/0:6,0:5:5.37:0,5,68	0/0:23,0:23:57.19:0,57,817	1/1:2,16:18:36.12:737,36,0	1/1:3,7:10:18.06:368,18,0	0/0:30,0:30:63.19:0,63,860	0/0:9,0:9:18.06:0,18,260	1/1:9,13:22:42.14:836,42,0	1/1:3,13:18:33.02:543,33,0	0/0:11,0:11:30.09:0,30,413	1/1:1,14:15:30.10:614,30,0	0/0:14,0:14:27.08:0,27,372	0/0:15,0:15:30.10:0,30,433	1/1:3,5:8:12.04:246,12,0	0/0:30,0:30:75.23:0,75,1061	1/1:1,22:23:54.19:1097,54,0	0/0:16,0:16:27.09:0,27,389	0/0:20,0:20:48.16:0,48,691	0/0:15,0:15:33.11:0,33,477	./.	1/1:3,5:9:9.03:162,9,0	1/1:2,6:8:18.06:341,18,0	1/1:4,16:20:39.13:755,39,0	0/1:18,1:19:19.31:19,0,505	0/0:16,0:15:36.11:0,36,501	0/0:19,0:19:54.18:0,54,777
chr10	91178735	.	GTTACATAAAACAAATACATAAATCTTTGA	G	6387.59	PASS	AB=0.842;AC=11;AF=0.196;AN=56;BaseQRankSum=9.639;DP=595;FS=52.411;HRun=0;HaplotypeScore=412.8983;InbreedingCoeff=-0.2557;MQ=52.98;MQ0=27;MQRankSum=-6.862;QD=34.16;ReadPosRankSum=3.590;VQSLOD=1.8448;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,16833	0/0:13,0:13:39.13:0,39,4672	0/0:14,0:2:6.02:0,6,524	0/0:13,0:2:6.02:0,6,299	0/0:22,0:22:66.16:0,66,6437	0/1:7,4:11:99:683,0,2522	0/1:7,1:8:99:173,0,2183	0/0:31,0:24:72.24:0,72,5780	0/0:22,0:22:66.21:0,66,8089	0/1:26,4:29:99:449,0,7326	0/1:20,1:21:99:132,0,6487	0/0:29,0:29:87.26:0,87,10405	0/1:8,2:10:99:445,0,2893	0/0:12,0:12:36.12:0,36,3766	0/0:24,0:24:72.23:0,72,8890	0/1:13,6:19:99:1045,0,4743	0/0:20,0:20:60.19:0,60,6736	0/1:12,2:14:99:439,0,3181	0/0:23,0:21:63.22:0,63,7028	0/0:31,0:31:93.32:0,93,10594	0/0:44,0:44:99:0,132,13958	0/1:17,3:20:99:562,0,4970	0/1:13,2:15:99:383,0,4437	0/1:11,3:14:99:404,0,2367	0/1:17,8:25:99:1673,0,6033	0/0:29,0:29:85.17:0,85,9775	0/0:26,0:26:75.24:0,75,9004	0/0:8,0:8:24.08:0,24,3111
chr10	91180158	.	C	CG	4105.56	PASS	AB=1.000;AC=34;AF=0.654;AN=52;BaseQRankSum=3.731;DP=343;FS=23.592;HRun=1;HaplotypeScore=62.2529;InbreedingCoeff=0.2356;MQ=35.13;MQ0=41;MQRankSum=-4.381;QD=14.82;ReadPosRankSum=4.884;VQSLOD=1.6934;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:32.79:0,33,364	0/0:3,0:1:2.97:0,3,20	./.	./.	1/1:7,15:20:30.04:396,30,0	0/1:15,0:14:61.29:73,0,61	1/1:15,0:10:2.82:77,3,0	1/1:7,16:23:48.79:714,49,0	1/1:5,8:9:12.04:176,12,0	0/0:15,0:11:4:0,4,143	0/1:11,0:9:31.03:31,0,68	1/1:3,5:7:8.95:85,9,0	1/1:5,0:4:5.75:30,6,0	1/1:5,3:6:9.03:125,9,0	0/0:7,0:6:11.95:0,12,117	0/1:10,0:8:30.48:59,0,30	0/0:18,0:16:35.11:0,35,390	0/1:6,0:4:6.46:6,0,20	1/1:12,10:19:53.94:600,54,0	1/1:6,9:14:30:395,30,0	1/1:4,2:5:11.94:92,12,0	0/1:12,0:12:30.32:30,0,71	0/1:16,0:14:44.89:45,0,97	0/1:9,0:7:3.35:3,0,63	0/1:16,0:15:31.49:31,0,85	1/1:8,10:16:45.02:557,45,0	1/1:8,10:16:36.01:448,36,0	1/1:4,5:4:9.03:132,9,0
chr10	91180159	.	G	GA	3203.74	PASS	AB=0.946;AC=42;AF=0.840;AN=50;BaseQRankSum=1.456;DP=413;FS=13.282;HRun=9;HaplotypeScore=111.7072;InbreedingCoeff=0.4751;MQ=36.15;MQ0=41;MQRankSum=-2.532;QD=9.21;ReadPosRankSum=0.543;VQSLOD=0.9343;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:10.13:0,10,186	0/1:3,0:1:0:0,0,0	./.	./.	1/1:24,0:22:20.03:203,20,0	1/1:7,11:17:20.98:232,21,0	1/1:12,7:13:24.05:253,24,0	1/1:25,0:25:21.89:338,22,0	1/1:13,0:9:11.99:102,12,0	1/1:15,2:14:8.89:81,9,0	0/1:8,3:9:11.60:94,0,12	1/1:10,0:9:5.92:42,6,0	1/1:1,4:4:6.02:66,6,0	0/1:9,0:7:7.03:69,0,7	0/1:10,0:9:1.07:1,0,62	1/1:6,7:11:18.05:199,18,0	0/0:25,0:23:26.65:0,27,228	1/1:12,1:11:7.70:53,8,0	1/1:23,0:21:34.66:278,35,0	1/1:16,0:15:23.98:203,24,0	./.	1/1:9,7:16:17.25:163,17,0	1/1:14,6:18:18.30:176,18,0	1/1:8,1:7:3.48:35,3,0	1/1:14,11:24:21.76:195,22,0	1/1:19,0:17:29.96:254,30,0	1/1:19,0:17:26.95:230,27,0	1/1:9,0:4:8.99:74,9,0
chr10	91180286	.	G	GTT	6843.68	PASS	AB=0.567;AC=41;AF=0.732;AN=56;BaseQRankSum=1.373;DP=497;FS=2.919;HRun=10;HaplotypeScore=79.7018;InbreedingCoeff=0.7339;MQ=59.91;MQ0=2;MQRankSum=1.131;QD=16.86;ReadPosRankSum=0.201;VQSLOD=3.6035;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:48.60:0,49,612	0/0:9,0:9:27.04:0,27,267	0/0:11,0:10:11.99:0,12,121	0/0:7,0:7:8.48:0,8,64	1/1:5,0:20:4.07:89,4,0	1/1:2,17:19:32.97:491,33,0	1/1:2,9:10:17.55:232,18,0	0/1:4,1:26:0.39:228,0,0	1/1:3,0:15:22.46:79,22,0	1/1:2,13:16:40.33:524,40,0	1/1:3,27:30:72.11:967,72,0	1/1:2,0:11:12.05:43,12,0	1/1:0,16:18:38.45:521,38,0	0/1:2,0:14:5.05:53,0,5	0/0:13,0:13:36.06:0,36,360	1/1:1,12:13:23.85:351,24,0	0/0:20,0:19:51.09:0,51,518	1/1:4,20:24:45.13:648,45,0	0/1:7,0:17:38.69:39,0,60	1/1:2,1:35:53.07:317,53,0	1/1:1,0:9:19.96:70,20,0	1/1:1,9:11:28.86:376,29,0	1/1:2,12:15:29.59:402,30,0	1/1:3,18:21:38.34:541,38,0	1/1:6,12:18:29.99:419,30,0	1/1:3,0:27:55.14:215,55,0	1/1:2,0:21:44.07:155,44,0	1/1:1,0:11:22.64:81,23,0
chr10	91181427	.	TTGGTGG	T	462.18	PASS	AB=1.000;AC=15;AF=0.341;AN=44;BaseQRankSum=-1.038;DP=315;FS=6.643;HRun=0;HaplotypeScore=58.4669;InbreedingCoeff=0.4290;MQ=62.64;MQ0=21;MQRankSum=-3.036;QD=6.25;ReadPosRankSum=1.351;VQSLOD=0.1272;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:12.04:0,12,322	0/0:3,0:3:3.01:0,3,96	./.	./.	1/1:10,0:10:3.01:53,3,0	0/0:6,0:6:6.02:0,6,162	0/0:14,0:14:6.02:0,6,168	0/1:13,0:13:0:0,0,0	1/1:8,2:10:3.01:60,3,0	./.	0/0:5,0:5:3.01:0,3,73	1/1:5,2:7:3.01:60,3,0	0/0:6,0:6:3.01:0,3,78	1/1:7,2:9:9.03:180,9,0	0/0:5,0:4:3.01:0,3,96	0/0:5,0:5:6.02:0,6,157	0/0:9,0:9:6.02:0,6,191	0/0:9,0:8:6.02:0,6,123	1/1:10,0:8:3.01:60,3,0	./.	./.	0/0:8,0:8:3.01:0,3,82	0/0:6,0:6:3.01:0,3,77	0/0:9,0:9:6.02:0,6,125	0/0:6,0:6:3.01:0,3,78	1/1:8,1:8:6.02:120,6,0	./.	1/1:5,1:6:3.01:60,3,0
chr10	91181757	.	T	TC	3413.31	PASS	AB=0.543;AC=40;AF=0.769;AN=52;BaseQRankSum=1.782;DP=342;FS=17.987;HRun=9;HaplotypeScore=56.4447;InbreedingCoeff=0.6346;MQ=80.30;MQ0=0;MQRankSum=-4.865;QD=14.84;ReadPosRankSum=-2.876;VQSLOD=1.5078;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:82.70:0,83,708	./.	0/0:13,0:13:19.66:0,20,182	0/0:12,0:12:13.60:0,14,112	1/1:3,0:3:2.99:24,3,0	1/1:6,2:9:2.06:57,2,0	0/1:5,12:17:36.02:312,0,36	1/1:11,1:15:5.93:41,6,0	1/1:5,0:12:19.61:101,20,0	1/1:5,4:9:11.99:133,12,0	1/1:2,3:5:12:121,12,0	1/1:3,1:8:2.84:14,3,0	1/1:4,7:11:24.06:265,24,0	1/1:7,0:9:14.42:83,14,0	0/0:10,0:10:26.99:0,27,234	1/1:6,10:16:36.09:389,36,0	0/0:43,0:43:99:0,117,1009	1/1:2,13:14:39.11:431,39,0	1/1:13,0:13:19.36:127,19,0	0/1:0,0:2:0:0,0,0	1/1:16,0:21:23.04:188,23,0	1/1:2,3:5:11.24:106,11,0	1/1:1,2:3:6.02:66,6,0	1/1:7,19:26:57.15:630,57,0	1/1:7,2:9:15.03:156,15,0	1/1:8,0:8:5.96:43,6,0	1/1:12,0:14:0.48:124,0,0	./.
chr10	91181807	.	CT	C	6064.71	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=12.106;DP=391;FS=2.767;HRun=9;HaplotypeScore=67.1183;InbreedingCoeff=0.8928;MQ=65.96;MQ0=1;MQRankSum=-3.872;QD=21.66;ReadPosRankSum=-2.176;VQSLOD=4.9529;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:84.19:0,84,943	0/0:4,0:4:12.04:0,12,138	0/0:11,0:9:18.05:0,18,208	0/0:7,0:6:5.90:0,6,41	1/1:0,3:3:6:55,6,0	1/1:0,11:11:27:247,27,0	1/1:5,7:11:26.64:222,27,0	1/1:5,35:40:99:929,102,0	1/1:3,13:16:39.02:357,39,0	1/1:0,17:17:50.61:443,51,0	1/1:2,7:9:12:110,12,0	1/1:0,11:11:33.02:302,33,0	1/1:1,8:10:24.48:221,24,0	1/1:5,8:13:20.96:185,21,0	0/0:11,0:11:27.06:0,27,293	1/1:0,16:17:45.50:413,45,0	0/0:40,0:40:99:0,114,1284	1/1:1,12:14:33.96:304,34,0	1/1:4,17:20:50.98:457,51,0	1/1:0,7:7:18.01:165,18,0	1/1:2,9:11:27.01:247,27,0	1/1:2,3:5:6:55,6,0	1/1:1,2:3:6:55,6,0	1/1:1,5:7:17.69:148,18,0	1/1:1,6:7:18.01:165,18,0	1/1:2,17:19:51.02:467,51,0	1/1:2,16:18:42.01:384,42,0	1/1:0,8:8:15.01:137,15,0
chr10	91182798	.	T	TA	6092.93	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-14.062;DP=590;FS=1.067;HRun=10;HaplotypeScore=54.8226;InbreedingCoeff=0.9959;MQ=78.63;MQ0=0;MQRankSum=-1.751;QD=23.52;ReadPosRankSum=-0.977;VQSLOD=5.2378;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:83.86:0,84,682	0/0:7,0:7:17.98:0,18,148	0/0:13,0:13:23.15:0,23,223	0/0:15,0:15:26.96:0,27,221	1/1:7,20:27:32.33:521,32,0	0/0:28,0:28:80.88:0,81,661	0/0:16,1:18:46.95:0,47,372	1/1:8,27:35:34.33:732,34,0	1/1:1,18:19:48.12:512,48,0	0/0:21,0:21:53.92:0,54,441	0/0:23,0:23:47.89:0,48,388	1/1:0,10:10:21.05:224,21,0	0/0:15,0:15:41.94:0,42,345	1/1:2,10:12:27.07:288,27,0	0/0:16,0:16:44.93:0,45,366	0/0:16,0:16:38.93:0,39,320	0/0:25,0:25:62.25:0,62,516	0/0:17,0:17:41.93:0,42,345	1/1:4,15:19:23.46:448,23,0	1/1:6,32:38:90.19:947,90,0	1/1:2,14:16:42.11:448,42,0	0/0:28,1:29:42.92:0,43,559	0/0:26,0:26:68.90:0,69,567	0/0:12,0:12:29.96:0,30,246	0/0:20,0:20:59.93:0,60,493	1/1:8,31:39:40.93:846,41,0	1/1:2,31:33:68.59:935,69,0	1/1:4,7:11:18.04:191,18,0
chr10	91183751	.	CATACATACATAT	C	4454.71	PASS	AB=0.690;AC=33;AF=0.688;AN=48;BaseQRankSum=5.600;DP=687;FS=5.051;HRun=0;HaplotypeScore=211.6061;InbreedingCoeff=0.5462;MQ=60.82;MQ0=4;MQRankSum=0.127;QD=10.22;ReadPosRankSum=-2.649;VQSLOD=3.3654;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:53.99:0,54,773	0/0:7,0:7:21.03:0,21,741	0/0:13,0:7:11.93:0,12,96	0/0:17,0:6:5.97:0,6,52	0/1:2,22:24:0.01:0,0,0	1/1:4,14:18:6.02:213,6,0	./.	1/1:34,0:32:67.66:585,68,0	1/1:5,32:37:9.03:323,9,0	1/1:28,0:27:6.43:384,6,0	1/1:21,0:21:0.10:1,0,0	1/1:3,17:20:3:29,3,0	1/1:3,17:20:2.79:51,3,0	./.	0/0:39,0:39:99:0,105,3436	1/1:9,20:29:3.01:106,3,0	0/0:28,0:29:45.48:0,45,2691	0/1:14,0:14:18.18:219,0,18	1/1:5,16:21:47.92:543,48,0	1/1:4,25:29:2.39:16,2,0	./.	0/1:4,19:23:0:0,0,0	1/1:5,16:21:2.58:107,3,0	./.	1/1:3,23:26:2.80:108,3,0	1/1:11,23:34:56.98:1231,57,0	1/1:2,27:29:8.77:323,9,0	1/1:1,7:8:6.02:216,6,0
chr10	91183755	.	CATACATAT	C	3762.79	PASS	AB=1.000;AC=32;AF=0.667;AN=48;BaseQRankSum=6.866;DP=658;FS=6.977;HRun=0;HaplotypeScore=177.6624;InbreedingCoeff=0.6496;MQ=60.09;MQ0=5;MQRankSum=-0.122;QD=9.50;ReadPosRankSum=-2.704;VQSLOD=1.6266;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:53.97:0,54,511	0/0:8,0:8:24.02:0,24,563	0/0:13,0:7:11.93:0,12,96	0/0:16,0:5:5.97:0,6,52	0/1:24,0:24:0.13:0,0,0	1/1:17,0:17:6.02:121,6,0	./.	1/1:33,0:30:74.51:606,75,0	1/1:35,0:35:9.03:185,9,0	1/1:0,28:27:68.13:802,68,0	1/1:2,19:21:0.15:1,0,0	0/0:19,0:19:0.47:0,0,1	1/1:19,0:19:1.90:6,2,0	./.	0/0:38,0:38:99:0,108,2373	1/1:26,0:26:3:60,3,0	0/0:29,0:29:41.33:0,41,1824	1/1:16,0:16:24.88:202,25,0	1/1:17,0:17:47.92:451,48,0	1/1:28,0:28:2.60:17,3,0	./.	0/1:22,0:22:0:0,0,0	1/1:20,0:20:2.69:61,3,0	./.	1/1:25,0:25:2.80:61,3,0	1/1:29,1:30:70.30:882,70,0	1/1:27,0:26:8.77:185,9,0	1/1:8,0:8:6.02:123,6,0
chr10	91183759	.	CATAT	C	3084.24	PASS	AB=1.000;AC=33;AF=0.688;AN=48;BaseQRankSum=8.023;DP=620;FS=4.093;HRun=0;HaplotypeScore=146.5715;InbreedingCoeff=0.5418;MQ=59.78;MQ0=5;MQRankSum=0.046;QD=7.69;ReadPosRankSum=-2.534;VQSLOD=2.5120;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:99:157,0,156	0/0:8,0:8:24.02:0,24,360	0/0:11,0:5:11.93:0,12,96	0/0:13,0:2:5.97:0,6,52	0/1:23,0:23:0.01:0,0,0	1/1:15,0:15:6.02:69,6,0	./.	1/1:33,0:30:83.39:658,83,0	1/1:33,0:33:9.03:101,9,0	1/1:28,0:27:53.93:577,54,0	0/1:21,0:21:0.32:0,0,0	1/1:17,0:17:2.88:15,3,0	1/1:18,0:18:2.88:35,3,0	./.	0/0:37,0:37:86.01:0,86,1845	1/1:20,0:20:3.01:36,3,0	0/0:25,0:25:49.47:0,49,1227	1/1:14,0:14:32.40:243,32,0	1/1:17,0:17:47.91:412,48,0	1/1:27,0:27:2.82:17,3,0	./.	0/0:21,0:21:0:0,0,0	1/1:19,0:19:2.69:33,3,0	./.	1/1:24,0:24:2.90:34,3,0	1/1:28,0:28:71.44:681,71,0	1/1:27,0:26:8.86:101,9,0	1/1:8,0:8:6.02:68,6,0
chr10	91183763	.	TATAC	T	958.35	PASS	AB=1.000;AC=25;AF=0.595;AN=42;BaseQRankSum=7.771;DP=610;FS=1.718;HRun=0;HaplotypeScore=152.6461;InbreedingCoeff=0.4016;MQ=58.70;MQ0=5;MQRankSum=-3.522;QD=2.90;ReadPosRankSum=0.420;VQSLOD=2.8155;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,20:29:27.09:424,27,0	0/0:8,0:8:15.05:0,15,331	./.	./.	0/1:23,0:23:0.01:0,0,0	1/1:14,0:14:5.99:51,6,0	./.	0/0:32,0:29:3.72:0,4,22	1/1:32,0:32:9:79,9,0	0/1:29,0:28:46.77:86,0,47	0/1:19,0:19:0.32:0,0,0	./.	1/1:18,0:18:2.94:18,3,0	./.	0/0:38,1:39:28.08:0,28,1388	1/1:20,0:20:3:25,3,0	0/0:25,0:25:53.92:0,54,1150	0/0:15,0:15:10.23:0,10,61	1/1:16,0:16:5.44:46,5,0	0/1:27,0:27:0.11:0,0,0	./.	0/0:20,0:20:0:0,0,0	1/1:18,0:18:2.68:26,3,0	./.	1/1:24,0:24:2.89:26,3,0	1/1:27,0:27:1.34:188,1,0	1/1:27,0:26:9:78,9,0	0/1:8,0:8:11.99:43,0,12
chr10	91184088	.	T	TAAAGAAAG	3175.74	PASS	AC=32;AF=0.667;AN=48;BaseQRankSum=2.368;DP=464;FS=2.457;HRun=0;HaplotypeScore=106.7444;InbreedingCoeff=0.8074;MQ=57.36;MQ0=5;MQRankSum=-0.354;QD=11.46;ReadPosRankSum=-0.950;VQSLOD=2.3733;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:22:5.99:48,6,0	1/1:2,0:6:11.98:97,12,0	./.	./.	1/1:15,0:23:20.90:168,21,0	0/0:17,0:17:15.05:0,15,363	0/0:8,0:9:8.96:0,9,159	./.	0/0:7,0:12:9.03:0,9,167	1/1:21,0:21:26.99:521,27,0	1/1:15,0:16:8.95:67,9,0	./.	1/1:6,4:11:9.03:357,9,0	1/1:7,0:14:5.99:48,6,0	1/1:15,0:20:8.98:73,9,0	1/1:3,0:7:8.98:72,9,0	1/1:18,0:30:17.96:145,18,0	1/1:8,0:11:5.99:48,6,0	0/0:29,0:25:9.02:0,9,171	0/0:29,0:29:32.91:0,33,647	0/0:6,0:10:9.03:0,9,164	1/1:10,4:15:18.06:561,18,0	1/1:15,0:15:20.83:413,21,0	1/1:12,0:12:6:67,6,0	1/1:12,9:23:18.04:625,18,0	0/0:20,0:20:12.04:0,12,290	1/1:22,0:29:5.92:48,6,0	0/0:18,0:18:48.16:0,48,1158
chr10	91184738	.	CCCT	C	1964.33	PASS	AB=0.979;AC=35;AF=0.625;AN=56;BaseQRankSum=7.101;DP=607;FS=48.341;HRun=0;HaplotypeScore=130.7326;InbreedingCoeff=0.3049;MQ=50.07;MQ0=28;MQRankSum=5.484;QD=4.90;ReadPosRankSum=-1.629;VQSLOD=1.0467;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:47.61:0,48,888	0/0:5,0:5:14.97:0,15,260	0/0:55,0:15:39.60:0,40,769	0/0:67,0:11:24.01:0,24,409	1/1:24,0:24:24.38:69,24,0	1/1:16,1:14:3.05:99,3,0	0/1:27,1:29:43.26:131,0,43	1/1:21,1:21:35.11:161,35,0	1/1:16,0:15:20.10:154,20,0	0/1:24,3:25:19.59:300,0,20	0/1:8,0:8:1.35:13,0,1	0/1:16,1:17:4.71:32,0,5	0/1:21,0:21:20.42:150,0,20	1/1:28,0:26:29.22:123,29,0	0/0:26,0:26:75.26:0,75,1654	1/1:21,0:21:1.93:112,2,0	0/0:27,0:27:66.36:0,66,1580	0/1:11,0:10:4.96:61,0,5	1/1:12,0:12:13.01:60,13,0	1/1:10,1:9:12.16:46,12,0	1/1:19,1:18:7.23:83,7,0	1/1:8,0:8:13.37:57,13,0	0/1:15,0:15:16.03:23,0,16	0/1:32,0:28:18.67:62,0,19	1/1:11,0:11:15.41:64,15,0	1/1:16,0:16:22.55:152,23,0	0/1:25,0:22:60.65:109,0,61	1/1:9,1:10:14.88:93,15,0
chr10	91184739	.	CCT	C	9770.50	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=-1.681;DP=604;FS=19.143;HRun=0;HaplotypeScore=96.1647;InbreedingCoeff=0.8576;MQ=48.90;MQ0=28;MQRankSum=2.047;QD=24.49;ReadPosRankSum=-0.046;VQSLOD=4.1568;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:41:0,41,655	0/0:5,0:5:14.96:0,15,193	0/0:53,0:14:34.66:0,35,540	0/0:66,1:11:25.93:0,26,350	1/1:22,2:24:39.60:589,40,0	1/1:16,1:14:24.83:339,25,0	1/1:27,1:28:36.46:517,36,0	1/1:16,6:21:60.07:881,60,0	1/1:17,0:16:32.46:406,32,0	1/1:27,0:25:31.81:566,32,0	1/1:7,1:8:15.03:208,15,0	1/1:14,2:16:32.40:493,32,0	1/1:21,0:21:27.01:358,27,0	1/1:29,0:27:52.12:765,52,0	0/0:26,0:26:75.21:0,75,1309	1/1:21,1:22:54.13:693,54,0	0/0:27,0:27:72.18:0,72,1234	0/1:10,0:10:14.38:201,0,14	1/1:8,3:11:28.45:399,28,0	1/1:11,0:9:10.45:220,10,0	1/1:19,0:17:3.98:390,4,0	1/1:9,0:9:18.93:258,19,0	1/1:14,1:15:33.10:468,33,0	1/1:30,0:28:37.01:471,37,0	1/1:10,1:11:19.31:280,19,0	1/1:16,0:16:36.08:542,36,0	1/1:19,4:20:27.61:418,28,0	1/1:10,0:10:17.63:306,18,0
chr10	91184741	.	T	TC	4094.14	PASS	AB=0.733;AC=43;AF=0.768;AN=56;BaseQRankSum=8.801;DP=639;FS=29.035;HRun=3;HaplotypeScore=121.1713;InbreedingCoeff=0.8779;MQ=48.11;MQ0=29;MQRankSum=1.924;QD=9.54;ReadPosRankSum=-1.271;VQSLOD=-0.1769;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:28:34.33:0,34,477	0/0:6,0:6:14.99:0,15,171	0/0:54,0:14:36.59:0,37,470	0/0:66,0:11:25.38:0,25,278	1/1:17,9:26:30.91:111,31,0	1/1:13,4:14:23.89:147,24,0	1/1:26,3:27:37.32:198,37,0	1/1:24,0:23:48.53:212,49,0	1/1:14,6:19:26.79:170,27,0	1/1:23,4:25:51.11:499,51,0	1/1:6,2:8:10.28:37,10,0	1/1:15,2:16:21.68:83,22,0	1/1:14,8:22:38.19:383,38,0	1/1:23,7:28:33.24:207,33,0	0/0:24,0:27:75.20:0,75,966	1/1:21,2:23:43.36:269,43,0	0/0:27,0:27:73.79:0,74,979	0/1:7,4:10:9.81:193,0,10	1/1:9,1:10:16.15:101,16,0	1/1:12,2:12:15.03:92,15,0	1/1:19,4:21:9.94:160,10,0	1/1:10,2:12:18.56:118,19,0	1/1:16,0:16:21.31:77,21,0	1/1:26,7:30:28.65:201,29,0	1/1:9,3:12:18.49:103,18,0	1/1:16,2:18:48.29:317,48,0	1/1:22,3:22:35.59:315,36,0	1/1:10,0:11:21.57:102,22,0
chr10	91185003	.	AAAT	A	409.29	PASS	AB=0.900;AC=21;AF=0.618;AN=34;BaseQRankSum=1.598;DP=182;FS=5.153;HRun=0;HaplotypeScore=31.5484;InbreedingCoeff=0.4351;MQ=75.44;MQ0=2;MQRankSum=-0.427;QD=5.18;ReadPosRankSum=1.155;VQSLOD=0.8486;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:8:0:0,0,0	1/1:1,1:2:3.01:39,3,0	./.	./.	0/1:11,0:13:0:0,0,0	1/1:7,0:8:2.98:21,3,0	./.	./.	1/1:2,1:3:3.01:39,3,0	./.	./.	1/1:1,3:4:9.03:116,9,0	1/1:2,0:3:2.98:21,3,0	./.	0/0:2,0:2:3.01:0,3,57	./.	0/0:15,0:18:18.52:0,19,223	1/1:7,0:10:8.17:49,8,0	./.	1/1:5,2:7:6.02:77,6,0	0/0:4,0:4:3.01:0,3,48	./.	./.	0/0:6,0:6:6.02:0,6,98	0/1:4,1:5:29.68:30,0,89	1/1:3,0:6:8.93:63,9,0	1/1:7,2:9:6.02:77,6,0	0/0:10,0:9:15.05:0,15,222
chr10	91185360	.	T	TTAA	12495.06	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-0.737;DP=394;FS=5.292;HRun=0;HaplotypeScore=62.5470;InbreedingCoeff=0.9094;MQ=64.25;MQ0=3;MQRankSum=-3.691;QD=41.37;ReadPosRankSum=-0.532;VQSLOD=5.6140;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.13:0,81,1328	0/0:8,0:8:24.08:0,24,436	0/0:7,0:6:7.85:0,8,134	0/0:7,0:5:8.99:0,9,127	1/1:4,19:25:57.51:1183,58,0	1/1:1,0:23:48.15:574,48,0	1/1:1,0:7:9.03:108,9,0	1/1:5,21:30:78.52:1669,79,0	1/1:0,10:11:27.09:661,27,0	1/1:0,0:11:33.10:398,33,0	1/1:1,0:10:22.58:224,23,0	1/1:3,7:10:24.08:568,24,0	1/1:0,0:11:21.06:250,21,0	1/1:2,3:5:12.04:257,12,0	0/0:14,0:14:39.09:0,39,654	1/1:1,0:9:21.06:247,21,0	0/0:28,0:28:81.15:0,81,1379	1/1:1,0:18:33.05:372,33,0	1/1:5,18:24:65.97:1248,66,0	1/1:0,7:8:24.04:467,24,0	1/1:0,9:9:24.08:530,24,0	1/1:1,0:3:6.02:68,6,0	1/1:0,0:3:6.01:72,6,0	1/1:1,0:8:21.05:241,21,0	1/1:0,0:18:42.13:522,42,0	1/1:2,18:24:69.13:1158,69,0	1/1:0,19:21:48.16:1103,48,0	1/1:0,9:9:27.09:577,27,0
chr10	91186124	.	G	GATTTATTTATTTATTT	10597.21	PASS	AC=40;AF=0.769;AN=52;BaseQRankSum=3.260;DP=374;FS=0.000;HRun=0;HaplotypeScore=155.1908;InbreedingCoeff=0.6496;MQ=70.22;MQ0=0;MQRankSum=-8.676;QD=44.71;ReadPosRankSum=-3.950;VQSLOD=3.6152;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:78.27:0,78,2932	0/0:6,0:6:12.04:0,12,480	0/0:13,0:12:9.01:0,9,115	0/0:10,0:9:0.66:0,1,74	1/1:15,0:15:10.85:525,11,0	1/1:11,6:17:21.03:1262,21,0	1/1:6,0:6:3.01:86,3,0	1/1:33,0:29:45.14:2195,45,0	1/1:8,0:8:9.03:468,9,0	1/1:7,0:7:7.83:257,8,0	1/1:4,1:7:8.99:346,9,0	1/1:10,0:10:9.03:517,9,0	1/1:11,0:11:6.02:418,6,0	1/1:14,0:14:15.05:675,15,0	0/0:14,0:14:24.07:0,24,867	1/1:4,1:5:6.02:318,6,0	0/0:41,0:41:90.31:0,90,3597	1/1:7,3:11:12.04:912,12,0	1/1:23,0:22:24.07:1094,24,0	./.	1/1:8,0:8:9.02:277,9,0	./.	1/1:9,0:9:3.01:96,3,0	1/1:4,0:4:2.99:24,3,0	1/1:8,3:10:6.02:316,6,0	1/1:13,0:13:3.01:55,3,0	1/1:12,0:12:9.03:339,9,0	1/1:12,0:12:6.02:417,6,0
chr10	91188397	.	AG	A	19344.03	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=5.051;DP=636;FS=0.793;HRun=1;HaplotypeScore=65.8397;InbreedingCoeff=0.9991;MQ=84.11;MQ0=0;MQRankSum=-5.059;QD=37.49;ReadPosRankSum=2.223;VQSLOD=5.3784;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1721	0/0:7,0:7:21.07:0,21,334	0/0:20,0:20:60.19:0,60,901	0/0:22,0:22:46.16:0,46,847	1/1:0,30:30:81.23:1107,81,0	1/1:0,37:37:96.32:1342,96,0	1/1:0,23:23:57.15:775,57,0	1/1:0,38:38:99:1585,114,0	1/1:0,31:31:84.28:1172,84,0	1/1:0,25:25:75.24:1025,75,0	1/1:0,18:18:45.11:603,45,0	1/1:1,17:18:54.18:748,54,0	1/1:0,17:17:48.16:670,48,0	1/1:0,21:21:45.15:629,45,0	0/0:20,0:20:60.19:0,60,935	1/1:0,13:13:36.09:483,36,0	0/0:13,0:13:33.11:0,33,516	1/1:0,13:13:36.12:504,36,0	1/1:0,20:20:57.19:797,57,0	1/1:0,25:25:66.13:879,66,0	1/1:0,30:30:84.28:1175,84,0	1/1:0,19:19:48.16:671,48,0	1/1:0,28:28:81.27:1133,81,0	1/1:0,23:23:54.18:754,54,0	1/1:0,18:18:45.15:629,45,0	1/1:0,25:25:75.23:1028,75,0	1/1:0,23:23:57.17:797,57,0	1/1:0,21:21:60.20:839,60,0
chr10	91188674	.	A	AAAAG	2750.12	PASS	AB=0.996;AC=39;AF=0.722;AN=54;BaseQRankSum=-0.344;DP=478;FS=2.901;HRun=0;HaplotypeScore=52.5449;InbreedingCoeff=0.0875;MQ=28.73;MQ0=149;MQRankSum=0.719;QD=7.00;ReadPosRankSum=3.183;VQSLOD=1.5424;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:17:22.06:0,22,148	0/0:5,0:3:2.90:0,3,16	./.	0/0:19,0:1:3.01:0,3,43	1/1:23,0:20:28.76:294,29,0	1/1:14,0:12:6.02:91,6,0	0/1:8,0:8:1.30:203,0,1	1/1:17,0:13:36.66:359,37,0	1/1:10,3:9:9.09:105,9,0	1/1:15,0:10:3.15:132,3,0	1/1:18,0:16:1.89:69,2,0	1/1:14,0:6:0.04:53,0,0	1/1:15,0:5:3.01:46,3,0	0/1:13,0:9:4.45:49,0,4	0/0:13,0:6:0:0,0,0	1/1:3,0:3:3.01:46,3,0	0/1:31,0:13:5.16:5,0,14	1/1:23,0:7:9.03:137,9,0	0/1:25,0:12:28.15:28,0,93	1/1:11,0:7:11.90:136,12,0	1/1:9,0:4:2.04:13,2,0	0/1:8,0:5:4.52:79,0,5	1/1:4,6:10:0.28:37,0,0	1/1:22,0:5:0:23,0,0	1/1:15,0:13:15.02:210,15,0	1/1:24,0:22:52.89:613,53,0	0/1:17,0:10:5.44:121,0,5	0/1:41,0:7:26.20:35,0,26
chr10	91188677	.	A	AGAAG	4154.20	PASS	AB=0.813;AC=33;AF=0.611;AN=54;BaseQRankSum=-0.017;DP=482;FS=4.567;HRun=0;HaplotypeScore=53.8525;InbreedingCoeff=-0.0005;MQ=30.71;MQ0=134;MQRankSum=-2.022;QD=11.26;ReadPosRankSum=5.181;VQSLOD=1.8713;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:18:27.04:0,27,341	0/0:4,0:3:5.97:0,6,55	./.	0/0:19,0:1:3.01:0,3,59	1/1:5,16:21:32.53:415,33,0	1/1:2,8:13:6.02:127,6,0	0/1:3,5:9:17.04:294,0,17	1/1:5,13:17:46.11:645,46,0	1/1:12,2:10:4.46:140,4,0	0/1:4,9:11:22.36:169,0,22	0/1:6,6:17:14.81:66,0,15	0/1:13,0:7:18.15:60,0,18	1/1:10,2:6:3.01:64,3,0	0/1:11,1:12:19.80:70,0,20	0/0:15,0:8:2.92:0,3,18	1/1:1,3:4:3.01:64,3,0	0/0:29,0:14:13.41:0,13,82	1/1:14,6:7:9.03:196,9,0	0/1:25,0:12:96.57:97,0,185	1/1:4,5:8:9.73:142,10,0	1/1:11,0:6:6.22:43,6,0	0/1:6,1:5:18.92:102,0,19	0/1:12,1:11:8.49:53,0,8	0/1:19,0:5:0.95:32,0,1	1/1:4,10:14:12.03:274,12,0	1/1:4,16:24:57.12:887,57,0	0/1:7,5:12:26.66:159,0,27	0/1:38,1:7:53.47:53,0,55
chr10	91189057	.	AT	A	10299.41	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=12.167;DP=471;FS=0.871;HRun=6;HaplotypeScore=58.5511;InbreedingCoeff=0.9681;MQ=66.38;MQ0=1;MQRankSum=-2.619;QD=28.30;ReadPosRankSum=1.086;VQSLOD=5.3823;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1348	0/0:5,0:5:15:0,15,162	0/0:6,0:4:8.70:0,9,84	0/0:8,0:8:16.85:0,17,180	1/1:2,28:30:81.12:845,81,0	1/1:0,13:13:39.10:419,39,0	1/1:1,11:12:30.07:322,30,0	1/1:3,29:32:87.18:914,87,0	1/1:0,9:9:21.05:226,21,0	1/1:2,16:18:51.13:545,51,0	1/1:0,27:27:75.19:805,75,0	1/1:2,11:13:27.07:290,27,0	1/1:1,10:11:27.07:290,27,0	1/1:0,11:11:30.08:322,30,0	0/0:15,0:15:42.14:0,42,553	1/1:0,10:10:27.07:290,27,0	0/0:37,0:37:99:0,105,1316	1/1:1,21:22:60.11:632,60,0	1/1:1,18:19:54.14:580,54,0	1/1:1,17:17:48.08:503,48,0	1/1:2,16:19:47.48:492,47,0	1/1:0,3:3:8.98:84,9,0	1/1:0,11:11:30.08:322,30,0	1/1:0,13:13:39.10:419,39,0	1/1:0,21:21:45.11:484,45,0	1/1:1,10:11:30.07:322,30,0	1/1:0,27:27:72.18:774,72,0	1/1:0,14:14:39.10:419,39,0
chr10	91189713	.	T	TG	6264.69	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=0.480;DP=653;FS=3.293;HRun=8;HaplotypeScore=118.8607;InbreedingCoeff=0.9323;MQ=84.02;MQ0=0;MQRankSum=-2.067;QD=25.67;ReadPosRankSum=2.530;VQSLOD=4.1266;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,117,1065	0/0:3,0:3:3:0,3,27	0/0:22,0:22:44.43:0,44,379	0/0:24,0:24:14.16:0,14,323	0/0:18,0:18:48.03:0,48,439	1/1:2,16:18:20.68:492,21,0	1/1:3,23:26:72.19:819,72,0	0/0:21,0:21:51.03:0,51,467	0/0:27,0:27:75.02:0,75,681	1/1:8,24:31:66.17:745,66,0	1/1:1,4:5:9.03:104,9,0	0/0:32,0:32:72.02:0,72,659	1/1:3,20:23:54.16:623,54,0	0/0:23,0:23:57:0,57,513	0/0:28,0:28:78.02:0,78,710	1/1:6,21:27:32.71:630,33,0	0/0:25,0:25:66.01:0,66,599	1/1:1,24:25:63.19:727,63,0	0/0:24,0:24:53.96:0,54,486	0/0:11,1:12:1.40:0,1,264	0/0:53,0:53:99:0,129,1170	1/1:7,17:25:54.01:593,54,0	1/1:3,15:18:33.10:381,33,0	1/1:2,26:28:40.89:702,41,0	1/1:3,14:17:39.12:450,39,0	0/0:23,0:23:63.03:0,63,577	0/0:19,0:19:57.03:0,57,522	0/0:12,0:12:27.01:0,27,247
chr10	91189957	.	TAC	T	477.68	PASS	AB=0.978;AC=25;AF=0.463;AN=54;BaseQRankSum=6.918;DP=688;FS=1.647;HRun=0;HaplotypeScore=171.0916;InbreedingCoeff=-0.3285;MQ=59.12;MQ0=10;MQRankSum=-5.566;QD=0.97;ReadPosRankSum=2.366;VQSLOD=2.5099;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:74.99:0,75,1038	0/0:6,0:5:12.04:0,12,185	./.	0/0:45,0:24:8.90:0,9,136	0/1:18,0:18:23.46:35,0,23	1/1:22,0:22:12.02:40,12,0	0/1:29,0:29:12.35:12,0,40	0/1:22,0:22:22.71:23,0,48	0/1:24,2:26:18.83:19,0,118	0/1:23,0:23:12.88:13,0,206	0/0:11,0:11:2.99:0,3,24	0/1:25,1:26:44.75:45,0,107	0/1:19,0:19:31.51:37,0,32	0/0:30,0:30:31.62:0,32,162	0/1:26,3:30:28.56:29,0,580	0/1:27,0:27:25.15:49,0,25	0/1:31,3:33:45.78:46,0,673	0/1:19,0:18:19.82:40,0,20	0/1:24,0:22:1.54:2,0,60	0/1:10,0:10:10.66:11,0,39	0/1:47,2:49:49.93:50,0,79	1/1:25,0:25:7.36:25,7,0	0/0:19,0:20:2.91:0,3,80	1/1:23,0:23:7.67:28,8,0	1/1:13,0:13:4.99:17,5,0	0/1:29,1:30:42.79:65,0,43	0/1:13,0:13:22.36:22,0,79	0/1:11,0:11:22.28:31,0,22
chr10	91189984	.	ACACG	A	3860.60	PASS	AB=0.997;AC=30;AF=0.556;AN=54;BaseQRankSum=0.635;DP=625;FS=1.822;HRun=0;HaplotypeScore=179.3409;InbreedingCoeff=0.2286;MQ=51.80;MQ0=8;MQRankSum=-8.650;QD=8.54;ReadPosRankSum=-6.546;VQSLOD=0.9474;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:79.86:0,80,1484	0/0:6,0:6:17.83:0,18,254	0/0:26,0:15:30.16:0,30,329	0/0:34,0:14:33.48:0,33,336	0/1:22,0:22:75.08:75,0,150	1/1:3,24:26:18.04:289,18,0	1/1:7,16:23:12.01:181,12,0	0/1:27,0:26:10.71:328,0,11	0/1:28,0:28:29.41:29,0,337	1/1:8,19:27:49.88:577,50,0	./.	0/1:24,0:25:0.67:1,0,359	1/1:4,12:16:24.08:408,24,0	0/1:28,1:29:84.74:85,0,374	0/0:29,0:29:28.56:0,29,1063	1/1:7,13:20:29.98:500,30,0	0/0:28,0:27:60.05:0,60,1200	1/1:3,16:19:30.47:469,30,0	0/1:23,0:23:99:167,0,191	0/0:9,0:9:0.38:0,0,111	0/1:48,0:48:61.34:61,0,347	1/1:10,10:20:18.87:228,19,0	1/1:8,12:20:3.01:54,3,0	1/1:4,14:18:9.03:160,9,0	1/1:1,11:12:6.02:107,6,0	0/1:28,0:28:99:114,0,272	0/1:9,0:9:2.95:3,0,167	0/1:11,0:10:24.42:24,0,125
chr10	91189986	.	ACG	A	2397.13	PASS	AB=0.949;AC=30;AF=0.556;AN=54;BaseQRankSum=4.447;DP=614;FS=2.854;HRun=0;HaplotypeScore=165.0224;InbreedingCoeff=0.0249;MQ=53.71;MQ0=8;MQRankSum=-6.395;QD=5.32;ReadPosRankSum=-3.424;VQSLOD=2.4383;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:86.37:0,86,1297	0/0:6,0:6:18:0,18,261	0/0:26,0:15:29.53:0,30,302	0/0:33,0:15:36.21:0,36,353	0/1:17,5:22:18.52:154,0,19	1/1:27,0:26:17.76:119,18,0	0/1:22,0:22:19.01:64,0,19	1/1:27,0:26:22.32:373,22,0	0/1:26,0:26:52.97:53,0,86	0/1:25,0:25:49.67:230,0,50	./.	0/1:24,1:25:66.14:82,0,66	1/1:14,0:15:21.18:136,21,0	0/1:29,0:29:91.46:93,0,91	0/0:27,1:28:32.16:0,32,821	1/1:20,0:20:8.11:169,8,0	0/0:28,0:27:16.61:0,17,875	1/1:19,0:19:2.26:162,2,0	0/1:22,1:23:22.42:204,0,22	0/1:6,3:9:42.37:55,0,42	0/1:43,0:43:64.92:87,0,65	1/1:19,0:19:18.72:129,19,0	0/1:20,0:20:10.51:11,0,58	1/1:18,0:18:8.89:58,9,0	1/1:12,0:12:5.91:39,6,0	1/1:26,2:28:2.81:257,3,0	0/1:9,1:10:45.44:45,0,83	0/1:12,0:11:14.79:56,0,15
chr10	91189988	.	G	GCA	5812.31	PASS	AB=1.000;AC=40;AF=0.741;AN=54;BaseQRankSum=9.360;DP=602;FS=4.543;HRun=0;HaplotypeScore=153.3899;InbreedingCoeff=0.7829;MQ=53.79;MQ0=8;MQRankSum=-5.721;QD=13.00;ReadPosRankSum=1.118;VQSLOD=4.8254;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:82.99:0,83,1065	0/0:7,0:7:20.89:0,21,248	0/0:25,0:15:35.49:0,35,463	0/0:33,0:15:34.67:0,35,402	1/1:21,1:22:39.46:337,39,0	1/1:27,0:26:14.64:114,15,0	1/1:21,1:22:8.61:55,9,0	1/1:28,0:27:70.11:896,70,0	1/1:25,1:26:46.10:363,46,0	1/1:22,0:22:49.38:486,49,0	./.	1/1:26,0:26:37.07:285,37,0	1/1:14,0:14:0.73:67,1,0	1/1:28,1:29:45.29:498,45,0	0/0:28,0:28:70.76:0,71,933	1/1:18,0:18:23.37:118,23,0	0/0:26,0:25:60.18:0,60,815	1/1:17,1:18:26.12:164,26,0	1/1:25,0:25:70.54:552,71,0	0/1:9,0:9:0.35:72,0,0	1/1:44,0:44:65.29:546,65,0	1/1:18,1:19:17.42:237,17,0	1/1:19,0:19:2.37:8,2,0	0/1:18,0:18:3.91:5,0,4	1/1:13,0:13:4.99:17,5,0	1/1:27,0:27:73.78:680,74,0	1/1:10,0:10:17.39:100,17,0	1/1:11,0:10:23.10:211,23,0
chr10	91190500	.	T	TAGAC	6464.30	PASS	AB=0.971;AC=28;AF=0.500;AN=56;BaseQRankSum=5.939;DP=749;FS=9.822;HRun=0;HaplotypeScore=347.8941;InbreedingCoeff=0.1239;MQ=43.40;MQ0=7;MQRankSum=-9.708;QD=11.22;ReadPosRankSum=1.463;VQSLOD=2.8587;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:71.95:0,72,1020	0/0:10,0:10:30.03:0,30,392	0/0:20,0:19:39.08:0,39,399	0/0:15,0:13:35.94:0,36,338	1/1:29,2:31:17.27:262,17,0	0/1:31,0:31:99:102,0,147	0/1:23,0:21:41.54:42,0,109	1/1:56,0:45:38.60:630,39,0	1/1:17,5:22:22.85:542,23,0	0/1:39,0:39:99:385,0,122	0/1:26,0:26:27.41:27,0,92	0/1:28,0:28:28.71:29,0,216	0/1:23,5:28:71.39:353,0,71	1/1:10,5:15:9.19:380,9,0	0/0:32,0:32:92.91:0,93,1258	0/1:32,0:32:23.97:24,0,312	0/0:30,0:30:58.07:0,58,990	0/1:13,3:16:43.45:278,0,43	0/1:22,1:19:8.02:282,0,8	1/1:35,2:37:42.08:556,42,0	0/0:9,1:10:5.60:0,6,33	0/1:27,0:26:35.39:35,0,118	0/1:36,0:36:72.69:73,0,162	0/0:25,0:25:31.87:0,32,219	0/1:23,0:23:64.59:65,0,119	1/1:27,7:32:44.70:931,45,0	1/1:35,9:44:77.65:1219,78,0	1/1:3,2:5:11.97:251,12,0
chr10	91190573	.	CAGAT	C	4884.68	PASS	AB=0.953;AC=38;AF=0.679;AN=56;BaseQRankSum=6.959;DP=578;FS=6.668;HRun=0;HaplotypeScore=309.5899;InbreedingCoeff=0.4913;MQ=39.54;MQ0=3;MQRankSum=-8.231;QD=10.98;ReadPosRankSum=0.003;VQSLOD=3.2628;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:52.55:0,53,1735	0/0:13,0:13:39.10:0,39,888	0/0:23,0:14:41.89:0,42,702	0/0:18,0:9:27.09:0,27,562	1/1:41,3:44:42.20:295,42,0	1/1:23,0:23:29.82:228,30,0	1/1:12,4:15:31.84:366,32,0	0/1:7,0:4:6.10:6,0,49	1/1:11,1:12:20.75:163,21,0	0/1:33,1:34:69.62:286,0,70	1/1:19,2:21:25.83:206,26,0	1/1:18,2:20:7.26:212,7,0	0/1:26,0:26:18.91:272,0,19	1/1:6,1:7:13.03:111,13,0	0/0:27,0:27:75.26:0,75,1938	1/1:20,0:20:19.54:212,20,0	0/0:23,0:23:62.65:0,63,1438	0/1:13,2:15:99:103,0,113	0/1:8,1:8:13.19:75,0,13	1/1:31,4:35:54.27:506,54,0	1/1:13,0:13:9.56:53,10,0	1/1:27,5:32:41.48:558,41,0	1/1:18,2:20:38.35:299,38,0	1/1:9,1:10:5.01:28,5,0	1/1:6,3:9:15.92:192,16,0	0/1:28,1:28:34.86:149,0,35	1/1:28,3:31:47.96:412,48,0	1/1:12,0:12:28.04:153,28,0
chr10	91190581	.	CAGAT	C	12243.62	PASS	AB=0.756;AC=39;AF=0.696;AN=56;BaseQRankSum=4.045;DP=610;FS=6.902;HRun=0;HaplotypeScore=288.1708;InbreedingCoeff=0.4824;MQ=39.61;MQ0=14;MQRankSum=-6.565;QD=26.05;ReadPosRankSum=2.722;VQSLOD=3.6875;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:55.83:0,56,1825	0/0:13,0:13:36.11:0,36,903	0/0:26,0:13:27.07:0,27,615	0/0:22,0:8:18.06:0,18,464	1/1:14,28:42:48.88:704,49,0	1/1:14,11:25:30.19:830,30,0	1/1:9,8:15:32.99:477,33,0	1/1:8,1:4:5.69:67,6,0	1/1:7,7:14:6.23:333,6,0	1/1:15,20:36:50.89:1445,51,0	1/1:10,11:21:28.91:603,29,0	0/1:14,7:21:17.70:397,0,18	0/1:15,13:28:9.72:795,0,10	1/1:4,3:7:4.50:180,5,0	0/0:25,0:25:72.25:0,72,1916	1/1:4,16:20:29.04:761,29,0	0/0:24,0:24:54.95:0,55,1430	0/1:16,2:18:70.27:70,0,97	0/1:7,2:8:2.65:189,0,3	1/1:26,12:38:19.16:812,19,0	1/1:10,5:15:3.14:256,3,0	1/1:22,14:36:58.02:1240,58,0	1/1:15,7:22:16.89:610,17,0	1/1:6,3:9:3.01:56,3,0	1/1:6,3:9:6.26:251,6,0	1/1:15,14:28:3.85:678,4,0	0/1:13,19:32:18.48:936,0,18	1/1:3,10:13:27.77:555,28,0
chr10	91190585	.	T	TAGAC	3780.43	PASS	AB=0.969;AC=23;AF=0.411;AN=56;BaseQRankSum=3.611;DP=599;FS=13.899;HRun=0;HaplotypeScore=289.1274;InbreedingCoeff=-0.5405;MQ=39.83;MQ0=17;MQRankSum=-6.791;QD=8.25;ReadPosRankSum=-8.541;VQSLOD=0.0919;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:72.71:0,73,1326	0/0:13,0:13:36.11:0,36,650	0/0:25,0:11:19.74:0,20,445	0/0:23,0:6:18.06:0,18,338	0/1:41,0:42:99:186,0,137	0/1:21,3:24:20.14:367,0,20	0/1:18,0:16:92.15:92,0,209	0/1:10,0:3:1.04:6,0,1	0/1:15,0:15:56.94:136,0,57	0/1:31,2:34:99:310,0,209	0/1:20,1:21:25.64:263,0,26	0/1:21,0:21:99:113,0,160	0/1:23,1:24:42.32:277,0,42	0/1:7,0:7:41.56:42,0,63	0/0:26,0:26:75.24:0,75,1390	0/1:19,1:20:89.17:183,0,89	0/0:24,0:24:57.20:0,57,1051	0/1:17,0:17:20.76:21,0,123	0/1:8,0:7:68.82:69,0,105	0/1:35,0:35:99:266,0,331	0/1:16,0:16:30.58:67,0,31	0/1:29,4:33:95.13:622,0,95	0/1:16,3:19:29.25:220,0,29	1/1:9,0:9:2.42:18,2,0	0/1:7,1:8:64.67:101,0,65	0/1:29,0:28:99:142,0,428	0/1:33,0:33:99:174,0,378	0/1:15,0:15:99:106,0,127
chr10	91190604	.	T	TA	101.34	PASS	AB=0.869;AC=3;AF=0.054;AN=56;BaseQRankSum=6.071;DP=643;FS=2.295;HRun=3;HaplotypeScore=266.9772;InbreedingCoeff=-0.0718;MQ=40.09;MQ0=24;MQRankSum=-4.069;QD=1.27;ReadPosRankSum=0.401;VQSLOD=-0.6591;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:72.24:0,72,994	0/0:11,0:11:30.10:0,30,420	0/0:22,0:5:12.04:0,12,168	0/0:25,0:6:15.05:0,15,201	0/0:45,0:45:44.62:0,45,618	0/0:23,0:23:42.13:0,42,559	0/0:19,1:18:20.61:0,21,268	0/0:18,1:12:26.76:0,27,341	0/0:16,2:18:39.12:0,39,515	0/0:43,0:43:99:0,129,1769	0/0:26,0:26:41.73:0,42,545	0/0:16,2:18:36.53:0,37,476	0/0:23,0:23:48.15:0,48,650	0/0:9,1:10:18.06:0,18,235	0/0:26,0:26:78.26:0,78,1091	0/0:23,0:23:38.93:0,39,522	0/0:23,0:23:64.43:0,64,856	0/1:11,5:16:88.96:89,0,363	0/0:10,0:7:21.07:0,21,292	0/0:36,4:40:14.85:0,15,700	0/0:14,3:17:20.69:0,21,272	0/0:31,0:31:60:0,60,801	0/0:24,0:24:48.04:0,48,612	0/0:11,1:12:5.90:0,6,77	0/0:8,0:8:12.04:0,12,179	0/1:26,1:26:11.65:12,0,753	0/1:32,5:37:97.60:98,0,1020	0/0:12,1:13:1.99:0,2,455
chr10	91190668	.	T	TGATA	12892.08	PASS	AB=0.944;AC=45;AF=0.804;AN=56;BaseQRankSum=2.267;DP=465;FS=8.546;HRun=0;HaplotypeScore=141.7840;InbreedingCoeff=0.8072;MQ=44.80;MQ0=0;MQRankSum=-7.527;QD=34.20;ReadPosRankSum=0.403;VQSLOD=4.4986;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,2:34:84.67:85,0,1119	0/0:13,0:13:30.10:0,30,528	0/0:16,0:15:35.53:0,36,460	0/0:8,0:7:14.96:0,15,191	1/1:11,7:18:15.98:505,16,0	1/1:9,6:15:32.92:609,33,0	1/1:5,2:7:15:265,15,0	1/1:20,0:15:6.02:97,6,0	1/1:11,12:23:50.55:927,51,0	1/1:16,14:30:72.05:1525,72,0	1/1:5,8:13:33:565,33,0	1/1:8,8:16:26.87:449,27,0	1/1:9,7:16:33.03:628,33,0	1/1:7,9:16:35.87:731,36,0	0/0:24,0:24:66.23:0,66,1174	1/1:6,9:15:30.08:680,30,0	0/0:26,1:26:52.18:0,52,1034	1/1:6,4:9:17.21:293,17,0	1/1:11,4:13:25.16:356,25,0	1/1:13,6:19:29.91:485,30,0	1/1:3,8:11:23.97:426,24,0	1/1:10,8:18:36.04:651,36,0	1/1:6,7:13:29.96:525,30,0	1/1:4,4:8:5.08:84,5,0	1/1:1,4:5:15.05:386,15,0	1/1:13,15:28:50.78:1252,51,0	1/1:13,11:24:44.97:1216,45,0	1/1:1,2:3:6.02:153,6,0
chr10	91190706	.	T	TAGAG	7858.12	PASS	AB=0.634;AC=35;AF=0.648;AN=54;BaseQRankSum=9.247;DP=332;FS=31.619;HRun=0;HaplotypeScore=131.6649;InbreedingCoeff=0.5129;MQ=38.28;MQ0=1;MQRankSum=-9.544;QD=37.78;ReadPosRankSum=-2.087;VQSLOD=3.0029;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:66.35:0,66,1313	0/0:14,0:14:39.13:0,39,740	0/0:20,0:14:33.11:0,33,623	0/0:11,0:6:15.05:0,15,259	1/1:3,4:7:5.54:159,6,0	1/1:1,2:3:6.02:160,6,0	0/1:3,2:5:6.80:77,0,7	1/1:22,8:21:26.38:650,26,0	1/1:6,11:17:5.44:711,5,0	1/1:6,3:9:14.96:278,15,0	0/1:3,8:11:18.29:345,0,18	1/1:8,8:16:12.97:619,13,0	1/1:1,4:5:9.03:241,9,0	1/1:4,8:12:20.93:554,21,0	0/0:15,0:15:45.15:0,45,854	1/1:5,2:7:5.71:160,6,0	0/0:28,0:27:72.20:0,72,1296	./.	1/1:4,7:11:23.84:636,24,0	1/1:0,7:7:6.96:467,7,0	1/1:1,3:4:9.03:218,9,0	1/1:5,8:13:18.06:451,18,0	0/1:5,5:10:0.04:232,0,0	0/0:1,2:3:2.84:0,3,14	0/1:2,7:9:7.16:381,0,7	1/1:5,13:18:11.40:879,11,0	0/1:5,6:11:19.07:440,0,19	1/1:1,2:3:9.03:200,9,0
chr10	91190717	.	T	TAGAC	9575.27	PASS	AB=0.647;AC=43;AF=0.768;AN=56;BaseQRankSum=11.135;DP=360;FS=2.976;HRun=0;HaplotypeScore=129.2241;InbreedingCoeff=0.7282;MQ=37.19;MQ0=6;MQRankSum=-9.417;QD=40.40;ReadPosRankSum=-3.072;VQSLOD=4.4362;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:73.40:0,73,1213	0/0:11,0:11:30.09:0,30,510	0/0:20,0:10:8.20:0,8,181	0/0:12,0:5:14.97:0,15,200	1/1:2,5:7:8.54:178,9,0	1/1:3,1:4:3.01:78,3,0	1/1:5,3:8:13.09:167,13,0	1/1:25,16:33:87.13:1581,87,0	1/1:5,11:16:33.11:737,33,0	0/1:5,6:11:5.62:494,0,6	1/1:1,10:11:30.08:566,30,0	1/1:2,13:15:33.11:667,33,0	1/1:4,2:6:8.95:148,9,0	1/1:5,5:10:14.75:343,15,0	0/0:19,0:19:51.14:0,51,846	1/1:3,1:4:5.95:95,6,0	0/0:31,0:30:72.19:0,72,1203	1/1:3,0:2:3.01:44,3,0	1/1:7,10:15:38.99:794,39,0	1/1:6,8:14:33.07:618,33,0	1/1:4,1:5:2.97:78,3,0	1/1:4,9:13:27.08:520,27,0	1/1:1,6:7:20.09:347,20,0	1/1:2,1:3:3:40,3,0	1/1:2,8:10:24.08:527,24,0	1/1:10,9:19:41.95:833,42,0	1/1:4,6:10:24.08:487,24,0	1/1:0,3:3:9.03:233,9,0
chr10	91190725	.	T	TAGAC	4548	PASS	AB=0.970;AC=26;AF=0.464;AN=56;BaseQRankSum=11.671;DP=405;FS=5.071;HRun=0;HaplotypeScore=162.2462;InbreedingCoeff=-0.2628;MQ=37.25;MQ0=13;MQRankSum=-9.729;QD=16.01;ReadPosRankSum=3.263;VQSLOD=4.5504;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:70.17:0,70,1369	0/0:10,0:10:30.08:0,30,534	0/0:17,0:6:9.03:0,9,161	0/0:16,0:5:12.03:0,12,199	0/1:11,0:11:36.43:74,0,36	0/1:6,0:6:32.75:33,0,73	0/1:8,0:8:2.99:36,0,3	0/1:37,9:37:40.60:1049,0,41	0/1:15,1:16:47.07:383,0,47	0/1:16,0:15:90.40:166,0,90	0/1:13,0:13:0.17:212,0,0	0/1:17,0:17:12.91:252,0,13	0/1:10,0:10:48.47:48,0,49	1/1:7,0:7:11.73:173,12,0	0/0:17,0:17:48.16:0,48,902	0/1:5,1:6:31.49:31,0,58	0/0:30,0:29:75.24:0,75,1379	0/1:5,0:4:11.17:11,0,31	0/1:19,0:17:99:299,0,161	0/1:18,0:18:65.85:228,0,66	0/1:7,0:7:32.67:33,0,62	1/1:15,0:15:15.52:220,16,0	1/1:13,0:12:13.11:143,13,0	1/1:3,0:3:2.03:6,2,0	0/1:11,0:11:23.22:218,0,23	0/1:19,1:20:66.61:444,0,67	0/1:11,1:13:52.95:376,0,53	0/1:4,0:4:10.96:111,0,11
chr10	91190759	.	T	TGATA	17457.53	PASS	AB=0.667;AC=32;AF=0.571;AN=56;BaseQRankSum=-5.424;DP=621;FS=1.337;HRun=0;HaplotypeScore=178.6142;InbreedingCoeff=-0.0227;MQ=41.81;MQ0=19;MQRankSum=-5.042;QD=34.64;ReadPosRankSum=3.926;VQSLOD=4.6443;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:57.19:0,57,969	0/1:11,1:12:46.10:46,0,439	0/0:27,0:12:36.12:0,36,594	0/0:18,0:9:20.86:0,21,315	0/1:15,16:31:12.96:873,0,13	0/1:2,11:13:25:581,0,25	0/1:6,7:13:38.54:302,0,39	0/1:35,13:26:99:501,0,120	1/1:7,10:18:30.10:760,30,0	0/1:9,27:36:95.30:2001,0,95	0/1:11,13:24:65.16:771,0,65	1/1:6,14:20:36.12:909,36,0	1/1:5,11:16:33.10:780,33,0	1/1:2,8:10:18.06:454,18,0	0/0:19,0:19:57.19:0,57,955	1/1:3,8:12:30.10:727,30,0	0/0:24,0:25:45.15:0,45,772	0/1:3,6:10:11.51:473,0,12	1/1:3,15:16:36.12:911,36,0	0/1:23,14:38:99:1056,0,249	0/1:6,6:13:31.02:379,0,31	0/1:18,13:31:99:679,0,114	0/1:15,15:29:99:809,0,160	1/1:2,6:8:9.03:203,9,0	0/1:13,13:26:99:711,0,114	0/1:8,25:38:82.12:1510,0,82	1/1:7,15:23:60.21:1489,60,0	1/1:2,12:14:21.07:533,21,0
chr10	91190872	.	TAGATAGA	T	6138.94	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=6.829;DP=567;FS=5.510;HRun=0;HaplotypeScore=177.3120;InbreedingCoeff=0.9408;MQ=45.28;MQ0=7;MQRankSum=-9.038;QD=52.47;ReadPosRankSum=-1.576;VQSLOD=4.3331;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:96.29:0,96,3661	0/0:10,0:10:30.10:0,30,1227	0/0:29,0:16:48.14:0,48,1578	0/0:26,0:17:48.13:0,48,1403	0/0:35,0:35:56.81:0,57,2271	1/1:0,11:11:30.07:773,30,0	1/1:2,2:4:8.77:54,9,0	0/0:39,0:28:81.20:0,81,2607	0/0:21,0:21:51.18:0,51,2053	1/1:0,26:26:69.16:1913,69,0	1/1:4,4:8:9.03:250,9,0	0/0:27,0:27:63.22:0,63,2504	1/1:2,14:16:42:920,42,0	0/0:21,0:21:51.18:0,51,2043	0/0:17,0:17:51.18:0,51,2116	1/1:5,5:10:27.04:631,27,0	0/0:30,0:29:85.51:0,86,3311	1/1:0,11:11:3.01:84,3,0	0/0:18,0:18:54.15:0,54,2014	0/0:33,0:33:75.13:0,75,2839	0/0:22,0:22:36.08:0,36,1366	1/1:5,6:11:27.01:580,27,0	1/1:4,3:7:11.95:207,12,0	1/1:4,2:6:11.77:150,12,0	1/1:3,4:7:21.07:578,21,0	0/0:33,1:34:10.32:0,10,3260	0/0:28,0:28:72.19:0,72,2407	0/0:23,0:23:63.22:0,63,2568
chr10	91190879	.	A	AC	39.99	PASS	AB=0.903;AC=10;AF=0.179;AN=56;BaseQRankSum=5.143;DP=562;FS=5.597;HRun=0;HaplotypeScore=160.8296;InbreedingCoeff=0.3093;MQ=45.49;MQ0=7;MQRankSum=-3.094;QD=0.53;ReadPosRankSum=-3.687;VQSLOD=1.2999;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,102,1422	0/0:10,0:10:30.10:0,30,420	0/0:25,0:15:45.14:0,45,616	0/0:27,0:18:51.17:0,51,703	0/0:34,0:34:56.50:0,56,796	0/0:13,0:13:1.99:0,2,29	1/1:6,1:8:6.58:60,7,0	0/0:34,0:25:75.25:0,75,1049	0/0:23,0:23:54.18:0,54,754	0/1:27,0:27:42.30:42,0,69	1/1:4,0:4:0.86:17,1,0	0/0:28,0:28:66.20:0,66,904	0/1:15,0:15:9.21:9,0,29	0/0:22,0:22:51.16:0,51,694	0/0:20,0:20:60.20:0,60,839	0/1:8,2:10:6.03:6,0,14	0/0:30,0:29:84.06:0,84,1173	0/0:13,0:13:2.22:0,2,7	0/0:19,0:19:57.18:0,57,777	0/0:30,0:30:72.20:0,72,983	0/0:21,0:21:33.03:0,33,463	0/0:8,2:10:3.95:0,4,24	0/0:6,2:8:4.07:0,4,13	1/1:3,1:4:2.80:13,3,0	0/1:5,2:7:10.47:23,0,10	0/0:33,0:33:98.53:0,99,1309	0/0:25,0:25:60.20:0,60,839	0/0:23,0:23:66.09:0,66,894
chr10	91190934	.	T	TGATTGATA	12489.81	PASS	AB=0.602;AC=40;AF=0.714;AN=56;BaseQRankSum=8.312;DP=553;FS=7.885;HRun=0;HaplotypeScore=221.1914;InbreedingCoeff=0.6620;MQ=53.96;MQ0=0;MQRankSum=-11.083;QD=30.46;ReadPosRankSum=-0.609;VQSLOD=2.9210;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,102,2439	0/0:11,0:11:30.09:0,30,750	0/0:21,0:19:46.76:0,47,1109	0/0:22,0:19:16.75:0,17,637	1/1:13,0:28:7.86:234,8,0	1/1:8,8:16:38.94:992,39,0	1/1:13,2:15:12.33:264,12,0	0/1:7,0:36:58.72:523,0,59	1/1:4,0:18:12.03:293,12,0	1/1:12,12:24:60.07:1954,60,0	1/1:2,11:16:27:893,27,0	1/1:5,0:19:41.90:390,42,0	1/1:4,11:18:38.94:1019,39,0	1/1:2,0:9:17.94:160,18,0	0/0:25,0:25:75.20:0,75,1823	1/1:8,4:14:35.94:732,36,0	0/0:24,0:24:69.08:0,69,1562	1/1:6,6:12:26.99:761,27,0	1/1:12,0:23:12.83:370,13,0	1/1:12,0:33:26.36:420,26,0	0/1:5,0:16:6.59:110,0,7	1/1:7,8:15:23.97:633,24,0	1/1:6,10:15:27.08:932,27,0	0/1:3,7:11:22.69:130,0,23	1/1:6,3:9:24.07:640,24,0	1/1:10,0:27:35.20:586,35,0	1/1:3,0:17:39.88:365,40,0	0/1:6,0:11:2.84:86,0,3
chr10	91190956	.	T	TAGAC	6400.12	PASS	AB=0.972;AC=24;AF=0.429;AN=56;BaseQRankSum=2.288;DP=582;FS=15.953;HRun=0;HaplotypeScore=207.5065;InbreedingCoeff=0.8484;MQ=50.98;MQ0=0;MQRankSum=-7.682;QD=23.02;ReadPosRankSum=-0.199;VQSLOD=2.9254;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:72.09:0,72,1062	0/0:10,0:10:30.04:0,30,421	0/0:22,0:17:27.02:0,27,330	0/0:21,0:16:8.74:0,9,132	1/1:3,13:16:20.09:422,20,0	0/0:16,0:16:27.08:0,27,384	0/0:15,0:15:17.84:0,18,274	1/1:37,8:39:56.84:860,57,0	1/1:6,14:21:24.08:554,24,0	0/0:29,0:29:68.97:0,69,911	0/0:18,0:18:33.07:0,33,455	1/1:5,11:16:21.07:511,21,0	0/0:18,0:18:27.01:0,27,324	1/1:3,6:11:3.01:74,3,0	0/0:22,0:22:48.12:0,48,724	0/1:16,1:17:37.72:38,0,406	0/0:26,0:26:68.54:0,69,1019	0/0:18,0:18:39.04:0,39,558	1/1:11,13:26:44.97:795,45,0	1/1:8,21:29:38.95:955,39,0	1/1:17,3:20:17.92:318,18,0	0/0:24,0:24:42.09:0,42,585	0/0:18,0:17:33.10:0,33,460	0/1:12,0:12:0.42:0,0,62	0/0:14,0:14:27.09:0,27,427	1/1:19,14:32:62.91:1130,63,0	1/1:9,8:20:18.06:424,18,0	1/1:9,3:12:21.01:319,21,0
chr10	91191095	.	A	AG	12700.62	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-0.435;DP=569;FS=2.909;HRun=6;HaplotypeScore=97.8818;InbreedingCoeff=0.9970;MQ=65.73;MQ0=0;MQRankSum=-6.410;QD=29.26;ReadPosRankSum=2.232;VQSLOD=5.1466;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:84.14:0,84,845	0/0:8,0:8:21.05:0,21,214	0/0:22,0:23:21.46:0,21,405	0/0:20,0:20:29.08:0,29,312	1/1:2,16:18:42.12:510,42,0	1/1:0,11:11:27.09:339,27,0	1/1:1,33:34:81.22:996,81,0	1/1:7,18:26:52.94:610,53,0	1/1:1,19:20:57.18:717,57,0	1/1:5,25:30:72.23:906,72,0	1/1:3,14:17:42.05:507,42,0	1/1:2,19:21:60.14:736,60,0	1/1:2,18:20:48.15:603,48,0	1/1:5,11:16:36.05:429,36,0	0/0:20,0:20:54.11:0,54,545	1/1:2,10:12:30.10:374,30,0	0/0:31,0:31:90.16:0,90,903	1/1:2,20:22:57.18:716,57,0	1/1:5,13:17:39.08:472,39,0	1/1:11,11:22:39.07:459,39,0	1/1:4,12:17:36.12:453,36,0	1/1:5,13:18:44.76:503,45,0	1/1:3,22:25:63.13:762,63,0	1/1:1,17:18:39.12:487,39,0	1/1:3,15:18:39.12:488,39,0	1/1:5,15:20:51.13:623,51,0	1/1:3,21:24:60.19:747,60,0	1/1:1,6:7:21.07:263,21,0
chr10	91191162	.	A	AGCTCCC	25912.57	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=1.434;DP=493;FS=8.596;HRun=0;HaplotypeScore=133.7323;InbreedingCoeff=0.9753;MQ=81.93;MQ0=2;MQRankSum=-14.675;QD=74.46;ReadPosRankSum=0.431;VQSLOD=5.5286;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.30:0,96,2396	0/0:9,0:9:27.08:0,27,639	0/0:23,0:23:58.72:0,59,1363	0/0:26,0:26:75.12:0,75,1614	1/1:2,14:16:9.32:404,9,0	1/1:3,13:16:39.13:1388,39,0	1/1:4,19:23:63.22:2086,63,0	1/1:7,16:28:81.24:2592,81,0	1/1:3,15:18:48.16:1671,48,0	1/1:3,7:10:24.08:842,24,0	1/1:2,8:10:12.01:359,12,0	1/1:4,11:15:45.14:1477,45,0	1/1:2,6:9:27.09:919,27,0	1/1:2,15:18:51.13:1819,51,0	0/0:18,0:18:54.15:0,54,1278	1/1:3,11:15:42.10:1272,42,0	0/0:36,0:36:99:0,105,2635	1/1:8,9:16:42.06:1122,42,0	1/1:5,6:11:27.08:779,27,0	1/1:7,15:24:39.13:1227,39,0	1/1:0,14:16:27.01:919,27,0	1/1:0,14:16:27.09:925,27,0	1/1:0,9:9:15.05:562,15,0	1/1:5,12:17:20.85:723,21,0	1/1:6,9:15:24.05:675,24,0	1/1:5,15:21:60.10:2128,60,0	1/1:5,10:15:39.13:1370,39,0	1/1:1,5:7:18.06:654,18,0
chr10	91191485	.	A	AGG	4614.96	PASS	AB=0.908;AC=41;AF=0.732;AN=56;BaseQRankSum=-4.874;DP=574;FS=92.681;HRun=3;HaplotypeScore=109.6857;InbreedingCoeff=0.4719;MQ=58.25;MQ0=18;MQRankSum=-1.239;QD=10.21;ReadPosRankSum=0.132;VQSLOD=0.1389;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:74.21:0,74,574	0/0:10,0:10:15.46:0,15,112	0/0:35,0:7:11.04:0,11,89	0/1:31,0:10:2.10:2,0,32	1/1:1,18:20:17.83:151,18,0	1/1:11,0:10:5.23:41,5,0	1/1:16,0:14:17.93:145,18,0	1/1:22,0:20:41.70:342,42,0	1/1:20,0:20:22.49:342,22,0	0/1:7,14:22:9.87:220,0,10	0/1:12,0:12:7.06:68,0,7	1/1:16,0:16:12.99:218,13,0	1/1:19,0:19:12.89:246,13,0	1/1:19,0:19:6.49:182,6,0	0/0:15,0:15:24.89:0,25,243	1/1:19,1:20:2.38:149,2,0	0/0:26,0:26:65.75:0,66,525	0/1:18,1:18:19.32:303,0,19	1/1:22,0:21:12.14:344,12,0	1/1:18,0:18:20.25:147,20,0	1/1:22,0:21:33.81:296,34,0	1/1:24,0:24:18.54:267,19,0	0/1:15,0:14:25.97:108,0,26	1/1:18,0:18:8.87:114,9,0	1/1:17,0:16:9.45:162,9,0	1/1:28,0:27:11.97:350,12,0	1/1:29,0:29:27.19:360,27,0	1/1:10,0:8:0.41:58,0,0
chr10	91191487	.	GGA	G	1090.23	PASS	AB=0.979;AC=18;AF=0.360;AN=50;BaseQRankSum=-1.153;DP=583;FS=5.886;HRun=0;HaplotypeScore=114.6947;InbreedingCoeff=-0.0004;MQ=56.11;MQ0=18;MQRankSum=1.116;QD=3.63;ReadPosRankSum=0.100;VQSLOD=2.0676;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,9:34:12.41:159,0,12	1/1:3,5:8:12.03:130,12,0	./.	./.	0/0:20,0:20:2.99:0,3,23	0/0:2,0:13:5.88:0,6,44	0/0:15,0:13:5.05:0,5,42	./.	0/1:22,0:22:23.97:24,0,120	0/0:21,0:20:3.69:0,4,142	0/0:10,0:11:6:0,6,68	0/1:17,0:17:10.91:11,0,102	0/0:19,0:19:11.87:0,12,124	0/1:19,0:19:99:107,0,112	1/1:11,3:16:8.85:79,9,0	0/0:5,0:26:21.01:0,21,214	1/1:13,10:26:32.59:304,33,0	0/0:20,0:19:19.82:0,20,186	0/1:23,0:22:21.79:30,0,22	0/1:22,0:22:9.37:122,0,9	0/1:22,0:21:38.69:54,0,39	1/1:22,0:22:16.24:74,16,0	0/0:14,0:14:4.45:0,4,67	0/0:0,0:19:8.94:0,9,70	0/0:18,0:17:3.58:0,4,30	0/1:30,0:29:71.05:71,0,126	0/1:27,0:27:41.63:42,0,149	0/1:12,0:10:43.35:43,0,54
chr10	91192684	.	TTGTG	T	15874.95	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=11.639;DP=704;FS=0.000;HRun=0;HaplotypeScore=126.2768;InbreedingCoeff=0.9853;MQ=68.19;MQ0=2;MQRankSum=-0.908;QD=31.31;ReadPosRankSum=2.454;VQSLOD=4.9371;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,126,3074	0/0:10,0:11:32.85:0,33,754	0/0:36,0:21:24.04:0,24,438	0/0:38,0:27:52.75:0,53,1165	1/1:4,12:16:30.10:502,30,0	1/1:5,17:22:51.13:822,51,0	1/1:7,19:28:54.18:881,54,0	1/1:16,14:31:45.13:692,45,0	1/1:3,14:17:36.12:602,36,0	1/1:8,23:31:69.19:1079,69,0	1/1:2,7:9:18.02:271,18,0	1/1:2,17:19:45.15:752,45,0	1/1:3,15:18:42.14:702,42,0	1/1:5,22:27:54.18:903,54,0	0/0:26,1:29:27.64:0,28,1651	1/1:5,24:30:63.21:1031,63,0	0/0:30,0:30:63.22:0,63,1549	1/1:3,15:18:27.09:451,27,0	1/1:17,11:28:27.07:420,27,0	1/1:7,13:21:36.04:520,36,0	1/1:10,32:42:78.26:1304,78,0	1/1:2,14:16:33.11:552,33,0	1/1:7,22:30:60.15:951,60,0	1/1:4,27:31:69.24:1153,69,0	1/1:4,13:17:33.07:522,33,0	1/1:4,14:21:48.14:725,48,0	1/1:8,20:28:44.40:890,44,0	1/1:4,3:7:9.03:150,9,0
chr10	91192990	.	GAC	G	19898.25	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=13.942;DP=704;FS=8.246;HRun=0;HaplotypeScore=122.7404;InbreedingCoeff=0.9996;MQ=86.54;MQ0=1;MQRankSum=-4.422;QD=37.83;ReadPosRankSum=2.907;VQSLOD=6.3340;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,2152	0/0:12,0:12:27.09:0,27,480	0/0:18,0:18:50.49:0,50,903	0/0:29,0:29:78.19:0,78,1312	1/1:0,18:18:51.17:714,51,0	1/1:0,20:20:51.17:714,51,0	1/1:2,32:34:93.31:1302,93,0	1/1:0,21:22:66.21:906,66,0	1/1:2,33:35:99:1386,99,0	1/1:3,26:29:81.26:1116,81,0	1/1:1,14:15:42.14:588,42,0	1/1:0,20:20:54.18:756,54,0	1/1:0,19:19:51.17:714,51,0	1/1:0,12:12:36.12:504,36,0	0/0:38,0:38:99:0,111,1979	1/1:3,27:30:78.26:1093,78,0	0/0:40,0:40:99:0,114,2052	1/1:2,26:28:78.26:1088,78,0	1/1:1,19:20:54.18:756,54,0	1/1:0,22:22:66.18:902,66,0	1/1:5,32:37:93.31:1303,93,0	1/1:0,19:19:54.18:756,54,0	1/1:3,25:28:66.17:925,66,0	1/1:2,45:46:99:1765,126,0	1/1:3,14:17:39.13:546,39,0	1/1:1,20:21:60.16:803,60,0	1/1:1,22:23:60.20:840,60,0	1/1:0,10:10:30.10:420,30,0
chr10	91194162	.	A	ATGTGTG	3642.53	PASS	AB=0.637;AC=21;AF=0.375;AN=56;BaseQRankSum=-6.896;DP=690;FS=0.000;HRun=0;HaplotypeScore=166.2267;InbreedingCoeff=0.7336;MQ=55.88;MQ0=5;MQRankSum=-3.227;QD=13.54;ReadPosRankSum=-1.432;VQSLOD=2.1540;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:35:19.64:0,20,1101	0/0:8,0:8:15.05:0,15,272	0/0:21,0:14:6.01:0,6,78	0/0:30,0:18:6.02:0,6,103	0/1:12,0:33:3.44:3,0,77	1/1:19,2:23:30.08:541,30,0	1/1:29,2:32:7.68:382,8,0	0/0:33,0:31:2.78:0,3,224	0/0:28,0:28:50.17:0,50,351	1/1:12,13:26:32.11:611,32,0	0/1:3,8:12:0:0,0,0	0/0:18,0:18:26.55:0,27,211	1/1:4,7:14:9.03:175,9,0	0/0:20,0:21:32.43:0,32,227	0/0:24,0:25:45.13:0,45,792	1/1:4,9:16:15.04:361,15,0	0/0:37,0:38:68.95:0,69,1166	0/1:17,0:27:32.33:352,0,32	0/0:28,0:28:23.45:0,23,178	0/0:10,0:10:11.73:0,12,72	0/0:59,0:57:43.98:0,44,387	1/1:10,5:15:17.65:430,18,0	1/1:2,8:14:10.68:303,11,0	1/1:11,16:30:8.95:116,9,0	1/1:7,15:26:11.83:367,12,0	0/0:32,0:32:41.27:0,41,442	0/0:21,0:20:23.39:0,23,145	0/0:14,0:14:12.82:0,13,68
chr10	91194188	.	G	GTA	6154.19	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=-5.363;DP=644;FS=0.000;HRun=0;HaplotypeScore=101.1835;InbreedingCoeff=0.4536;MQ=64.38;MQ0=11;MQRankSum=-2.275;QD=16.24;ReadPosRankSum=0.641;VQSLOD=4.1879;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:93.09:0,93,1078	0/0:7,0:7:18.04:0,18,236	0/0:33,0:16:39.47:0,39,398	0/0:30,0:16:38.94:0,39,421	0/1:30,0:30:99:210,0,142	0/0:21,0:21:16.36:0,16,211	0/0:30,0:30:36.04:0,36,324	1/1:2,24:25:59.72:706,60,0	1/1:13,13:26:50.56:898,51,0	0/1:12,0:12:9.20:9,0,97	0/1:7,0:7:6.02:6,0,29	1/1:3,14:17:13.82:373,14,0	0/1:10,0:10:6.57:7,0,18	1/1:3,21:24:32.78:558,33,0	0/0:22,0:22:60.09:0,60,724	0/1:16,0:16:10.33:10,0,74	0/0:35,0:35:98.41:0,98,1105	0/0:26,0:26:44.20:0,44,383	1/1:6,22:26:62.68:697,63,0	1/1:1,8:9:12.04:219,12,0	1/1:8,51:57:32.84:1005,33,0	0/1:12,0:12:25.36:26,0,25	0/1:16,0:16:24.75:25,0,83	0/0:25,0:25:3.17:0,3,81	0/1:22,0:22:4.56:5,0,113	1/1:17,10:27:31.32:740,31,0	1/1:3,21:23:23.82:394,24,0	1/1:0,13:13:15.05:266,15,0
chr10	91195812	.	C	CTTTG	19098.46	PASS	AB=0.643;AC=37;AF=0.661;AN=56;BaseQRankSum=-10.722;DP=622;FS=0.898;HRun=0;HaplotypeScore=95.5076;InbreedingCoeff=0.4386;MQ=63.51;MQ0=7;MQRankSum=-2.288;QD=40.29;ReadPosRankSum=0.764;VQSLOD=5.0803;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:99:0,99,1575	0/0:7,0:7:15.05:0,15,246	0/0:25,0:18:23.67:0,24,351	0/0:24,0:21:23.49:0,23,424	0/1:10,9:18:19.05:611,0,19	1/1:9,13:22:33.11:792,33,0	0/1:13,11:25:16.04:680,0,16	1/1:22,9:26:30.07:609,30,0	1/1:10,16:26:45.15:1098,45,0	1/1:7,16:23:51.18:1209,51,0	0/1:7,10:17:19.05:609,0,19	0/1:8,10:18:16.04:699,0,16	1/1:7,8:15:24.08:585,24,0	1/1:3,11:14:33.11:805,33,0	0/0:17,0:17:36.11:0,36,566	0/1:8,11:20:99:776,0,102	0/0:29,0:29:63.21:0,63,1032	0/1:9,19:27:40.70:1187,0,41	1/1:17,9:25:33.07:697,33,0	1/1:3,3:6:12.04:257,12,0	1/1:11,33:46:90.31:2195,90,0	1/1:5,7:12:21.07:508,21,0	1/1:4,12:16:36.12:875,36,0	1/1:7,17:24:48.11:1116,48,0	1/1:8,7:16:21.07:512,21,0	1/1:11,21:32:66.69:1561,67,0	1/1:3,17:18:48.16:1159,48,0	0/1:7,8:15:22.06:558,0,22
chr10	91196095	.	TAA	T	1641.93	PASS	AB=0.689;AC=30;AF=0.536;AN=56;BaseQRankSum=-0.209;DP=509;FS=1.038;HRun=17;HaplotypeScore=69.2658;InbreedingCoeff=0.4456;MQ=58.39;MQ0=31;MQRankSum=-2.460;QD=6.93;ReadPosRankSum=0.835;VQSLOD=-0.1505;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:36:91.45:0,91,889	0/0:5,0:5:11.40:0,11,113	0/0:80,0:16:17.40:0,17,130	0/0:68,0:9:5.05:0,5,41	0/1:3,1:12:9.14:9,0,24	1/1:1,9:14:19.91:159,20,0	1/1:2,4:6:11.92:95,12,0	0/1:15,4:21:24.29:71,0,24	0/1:9,0:10:6.06:6,0,96	1/1:6,9:16:17.01:163,17,0	1/1:6,7:16:3.16:177,3,0	1/1:3,2:14:1.34:60,1,0	1/1:3,4:8:17.46:116,17,0	0/1:1,1:12:13.65:14,0,15	0/0:13,0:15:12.33:0,12,362	1/1:2,3:5:5.92:47,6,0	0/0:15,0:20:37.68:0,38,406	1/1:6,21:28:47.65:419,48,0	0/1:10,2:13:28.39:28,0,82	0/0:7,1:12:7.03:0,7,86	0/0:2,0:5:4.74:0,5,17	1/1:3,5:9:14.65:107,15,0	1/1:4,9:13:17.91:142,18,0	1/1:4,6:10:10.06:74,10,0	1/1:1,6:7:11.97:95,12,0	0/0:9,0:17:23.21:0,23,133	0/1:6,2:21:53.19:53,0,74	0/0:11,0:11:11.11:0,11,80
chr10	91196258	.	GCACA	G	2342.14	PASS	AB=0.666;AC=19;AF=0.339;AN=56;BaseQRankSum=1.423;DP=547;FS=3.850;HRun=0;HaplotypeScore=121.6627;InbreedingCoeff=0.6476;MQ=59.44;MQ0=2;MQRankSum=0.512;QD=11.15;ReadPosRankSum=3.098;VQSLOD=3.2235;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:34:17.78:0,18,1058	0/0:5,0:7:17.53:0,18,311	0/0:25,0:17:6.02:0,6,116	0/0:36,0:26:9.03:0,9,159	0/0:6,0:18:12.04:0,12,211	0/1:9,2:20:46.16:138,0,46	0/1:13,1:20:22.63:57,0,23	0/0:24,0:23:22.89:0,23,366	0/0:9,0:17:0:0,0,0	1/1:13,7:22:20.18:292,20,0	1/1:7,8:15:15.05:238,15,0	0/0:14,0:27:17.23:0,17,208	1/1:10,9:21:24.55:363,25,0	0/0:9,0:15:12.44:0,12,186	0/0:15,0:19:29.57:0,30,568	1/1:6,4:11:9.03:143,9,0	0/0:20,0:22:44.56:0,45,955	0/1:7,2:19:60.64:70,0,61	0/0:6,0:9:12.01:0,12,151	0/0:6,0:10:5.98:0,6,72	0/0:35,0:40:38.77:0,39,650	1/1:1,11:15:14.94:218,15,0	1/1:5,9:14:9.50:144,10,0	1/1:19,14:38:33.01:524,33,0	1/1:4,9:15:24.04:353,24,0	0/0:14,0:16:23.97:0,24,306	0/0:13,0:13:15.01:0,15,250	0/0:2,0:5:6.02:0,6,99
chr10	91196961	.	AGAG	A	8475.59	PASS	AB=0.510;AC=21;AF=0.375;AN=56;BaseQRankSum=4.411;DP=604;FS=3.021;HRun=0;HaplotypeScore=103.6880;InbreedingCoeff=0.9178;MQ=80.11;MQ0=0;MQRankSum=-3.402;QD=42.59;ReadPosRankSum=4.595;VQSLOD=6.3580;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:47:99:0,133,3033	0/0:5,0:5:11.67:0,12,239	0/0:27,0:27:78.10:0,78,1673	0/0:20,0:20:47.11:0,47,968	0/0:15,0:15:42.13:0,42,934	1/1:0,13:13:33.11:615,33,0	1/1:0,30:30:72.25:1330,72,0	0/0:28,0:28:84.28:0,84,1987	0/0:21,0:21:63.19:0,63,1420	1/1:0,21:21:63.14:1051,63,0	1/1:0,7:7:21.03:355,21,0	0/0:21,0:21:63.22:0,63,1520	1/1:0,17:17:36.12:667,36,0	0/0:19,0:19:57.17:0,57,1252	0/0:28,0:28:78.23:0,78,1677	1/1:0,24:24:51.17:931,51,0	0/0:33,0:33:99:0,99,1982	0/1:1,24:25:22.68:842,0,23	0/0:21,0:21:63.18:0,63,1316	0/0:15,0:15:44.99:0,45,939	0/0:55,0:55:99:0,162,3641	1/1:0,8:8:21.03:354,21,0	1/1:0,15:15:36.08:629,36,0	1/1:0,27:27:63.22:1172,63,0	1/1:1,11:12:30.10:528,30,0	0/0:20,0:20:60.20:0,60,1429	0/0:22,0:22:66.21:0,66,1564	0/0:8,0:8:24.08:0,24,591
chr10	91197275	.	CCACACACACACA	C	1221.75	PASS	AC=16;AF=0.333;AN=48;BaseQRankSum=4.971;DP=480;FS=41.567;HRun=0;HaplotypeScore=150.9296;InbreedingCoeff=0.6654;MQ=67.69;MQ0=9;MQRankSum=-3.407;QD=9.85;ReadPosRankSum=-0.866;VQSLOD=1.1828;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:15.05:0,15,474	0/0:3,0:3:3.01:0,3,89	./.	0/0:24,0:15:1.25:0,1,3	./.	1/1:11,2:13:9.01:229,9,0	1/1:20,0:19:3:49,3,0	0/0:22,0:22:6.02:0,6,131	0/0:16,0:19:18.53:0,19,630	./.	1/1:7,2:8:6.02:205,6,0	0/0:12,0:12:12.04:0,12,497	1/1:10,3:13:9.03:307,9,0	0/0:15,0:14:18.06:0,18,543	0/0:11,0:12:3.01:0,3,77	1/1:12,2:16:15.05:318,15,0	0/0:23,0:24:44.51:0,45,1114	0/0:13,0:13:0.47:0,0,1	0/0:21,0:21:9.97:0,10,253	0/0:14,0:13:6.02:0,6,171	0/0:42,0:42:38.83:0,39,1301	./.	1/1:9,0:9:3:27,3,0	1/1:30,3:33:6.02:141,6,0	1/1:10,1:11:3.01:102,3,0	0/0:26,0:25:26.58:0,27,650	0/0:8,0:10:12.04:0,12,489	0/0:9,0:8:12.04:0,12,394
chr10	91198719	.	A	ATGTGGTATG	11182.81	PASS	AB=0.970;AC=36;AF=0.643;AN=56;BaseQRankSum=1.774;DP=595;FS=11.815;HRun=0;HaplotypeScore=593.8454;InbreedingCoeff=-0.3248;MQ=28.87;MQ0=7;MQRankSum=-2.627;QD=20.04;ReadPosRankSum=4.170;VQSLOD=0.5951;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:14.98:217,0,15	0/1:16,0:16:99:419,0,101	0/0:21,0:10:15.05:0,15,310	0/0:16,0:6:9.03:0,9,256	1/1:15,0:15:1.13:6,1,0	1/1:13,1:14:32.29:532,32,0	0/1:28,0:28:75.99:487,0,76	0/1:25,0:23:43.86:590,0,44	1/1:21,1:21:21.81:850,22,0	0/1:47,0:44:20.14:1209,0,20	1/1:14,1:15:0.85:22,1,0	1/1:25,3:28:50.35:1036,50,0	1/1:26,2:28:2.62:1103,3,0	0/1:13,4:18:2.35:391,0,2	0/1:28,0:28:99:576,0,129	0/1:23,2:25:25.70:661,0,26	0/1:14,0:14:99:331,0,286	0/1:4,0:4:5.23:58,0,5	0/1:29,0:22:99:565,0,126	1/1:28,0:28:9.39:287,9,0	1/1:14,0:12:2.79:67,3,0	1/1:27,0:26:16.57:240,17,0	0/1:21,2:23:19.40:60,0,19	0/1:21,1:22:30.75:62,0,31	0/1:20,0:20:35.78:73,0,36	0/1:26,0:26:63.87:658,0,64	0/1:24,1:26:18.23:664,0,18	1/1:4,0:4:1.20:18,1,0
chr10	91198726	.	ATG	A	1278.82	PASS	AB=0.788;AC=22;AF=0.393;AN=56;BaseQRankSum=2.180;DP=655;FS=6.114;HRun=0;HaplotypeScore=238.4025;InbreedingCoeff=-0.3616;MQ=31.18;MQ0=12;MQRankSum=-2.035;QD=2.65;ReadPosRankSum=3.700;VQSLOD=1.9565;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,2:18:62.64:63,0,147	0/1:13,4:17:99:126,0,250	0/0:22,0:10:28.85:0,29,402	0/0:23,0:9:13.61:0,14,243	1/1:12,1:15:0.76:2,1,0	0/1:6,6:17:21.71:22,0,153	0/1:17,7:29:52:52,0,58	0/1:23,6:26:99:198,0,264	0/1:18,5:22:57.65:58,0,212	0/1:45,8:47:99:270,0,150	0/0:12,3:17:4.26:0,4,11	0/1:23,7:30:48.52:49,0,201	0/0:12,8:30:26.49:0,26,319	0/1:14,4:18:4.95:5,0,22	0/1:28,3:31:53.30:53,0,328	0/1:12,5:27:3.81:4,0,227	0/0:18,0:18:34.66:0,35,540	0/1:4,0:4:5.76:7,0,6	0/1:26,3:22:99:103,0,145	0/1:21,5:29:4.94:23,0,5	0/0:16,1:14:5.65:0,6,52	0/1:21,5:27:37.55:38,0,40	0/0:21,3:24:4.66:0,5,47	0/1:8,2:23:0.04:0,0,0	0/0:15,2:21:6.53:0,7,66	0/1:22,5:27:99:233,0,151	0/1:14,5:26:99:114,0,242	1/1:2,0:7:0.10:6,0,0
chr10	91198732	.	G	GGTA	691.24	PASS	AB=0.986;AC=22;AF=0.393;AN=56;BaseQRankSum=4.747;DP=659;FS=12.098;HRun=0;HaplotypeScore=273.8050;InbreedingCoeff=-0.3174;MQ=31.49;MQ0=13;MQRankSum=-1.961;QD=1.40;ReadPosRankSum=-0.037;VQSLOD=1.0408;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:14.44:14,0,269	0/1:17,1:18:79.02:79,0,307	0/0:33,0:11:28.34:0,28,476	0/0:32,0:10:16.60:0,17,359	1/1:19,0:19:0.12:2,0,0	0/1:16,0:16:4.47:4,0,246	0/1:29,1:30:55.26:55,0,135	0/1:25,0:22:67.04:67,0,441	0/1:21,1:22:59.96:60,0,310	0/1:48,0:43:99:132,0,371	1/1:18,0:19:13.74:58,14,0	0/1:26,1:27:7.15:7,0,358	0/0:27,0:27:28.64:0,29,458	0/1:15,1:16:71.70:72,0,82	0/1:30,0:30:11.96:12,0,355	0/0:24,0:24:8.52:0,9,352	0/0:19,0:19:39.13:0,39,681	0/0:8,0:7:12.64:0,13,88	0/1:21,0:15:41.21:41,0,204	0/1:28,0:28:3.51:54,0,4	0/0:16,0:13:5.97:0,6,98	0/1:29,0:28:33.14:33,0,50	0/1:27,0:26:14.50:15,0,88	0/1:22,0:21:0:0,0,1	0/1:23,0:23:5.85:6,0,74	0/1:27,0:27:86.53:87,0,370	0/1:24,1:26:46.57:47,0,328	0/0:7,0:7:3.20:0,3,15
chr10	91198735	.	G	GCTA	316.31	PASS	AB=0.967;AC=14;AF=0.250;AN=56;BaseQRankSum=7.731;DP=679;FS=15.458;HRun=0;HaplotypeScore=263.2483;InbreedingCoeff=-0.0312;MQ=33.31;MQ0=13;MQRankSum=-2.777;QD=1.00;ReadPosRankSum=-1.272;VQSLOD=0.9435;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:21:0,21,339	0/0:19,0:18:19.33:0,19,380	0/0:36,0:12:33.05:0,33,465	0/1:35,0:12:3.04:3,0,373	0/1:19,0:19:0.15:1,0,0	0/0:16,0:16:4.96:0,5,226	0/0:33,0:33:10.50:0,10,141	0/1:31,0:27:24.89:25,0,502	0/1:18,3:21:72.96:73,0,320	0/0:49,0:43:3.59:0,4,449	1/1:19,0:19:15.26:66,15,0	0/1:25,3:28:99:120,0,268	0/0:26,0:26:26.24:0,26,440	0/0:16,0:16:1.73:0,2,11	0/0:29,0:29:29.85:0,30,424	0/0:24,0:24:9.60:0,10,338	0/0:19,0:19:48.07:0,48,785	0/0:8,0:7:12.59:0,13,74	0/1:21,1:15:57.35:57,0,223	0/1:24,3:27:38.55:76,0,39	0/0:18,0:15:7.38:0,7,112	0/1:31,0:30:6.42:6,0,20	0/1:24,0:23:6.02:6,0,9	0/0:21,0:20:0.47:0,0,1	0/1:24,0:24:9.19:9,0,50	0/1:27,1:28:12.49:12,0,327	0/0:26,0:26:20.76:0,21,370	0/1:7,0:7:0.10:0,0,4
chr10	91198741	.	G	GCTATGT	2310.35	PASS	AB=0.943;AC=22;AF=0.393;AN=56;BaseQRankSum=10.756;DP=756;FS=59.559;HRun=0;HaplotypeScore=353.9229;InbreedingCoeff=-0.4188;MQ=33.50;MQ0=18;MQRankSum=-3.285;QD=4.37;ReadPosRankSum=4.423;VQSLOD=0.5296;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:36.51:0,37,934	0/1:17,1:18:99:190,0,498	0/0:48,0:13:33.04:0,33,620	0/0:45,0:17:36.22:0,36,813	0/0:15,4:22:2.02:0,2,32	0/1:15,1:16:34.74:35,0,339	0/1:35,1:36:19.02:19,0,517	0/1:34,0:30:22.93:23,0,937	0/1:23,0:24:64.83:65,0,469	0/1:49,4:48:99:758,0,417	1/1:20,2:22:3.41:99,3,0	0/1:28,0:30:99:111,0,335	0/1:26,1:27:81.86:82,0,590	0/0:18,0:19:21.29:0,21,297	0/1:30,1:31:34.60:35,0,638	0/1:23,1:24:20.10:20,0,548	0/0:19,0:19:39.13:0,39,954	0/1:7,1:7:18.05:47,0,18	0/1:25,0:16:29.88:30,0,274	0/1:29,1:30:65.80:66,0,103	0/0:25,0:22:16.35:0,16,202	0/1:29,3:32:38.70:53,0,39	0/1:21,4:26:43.28:43,0,99	0/0:22,1:23:5.68:0,6,73	0/1:25,2:27:99:117,0,267	0/1:26,2:29:99:524,0,443	0/1:25,1:26:25.65:26,0,546	1/1:7,0:7:9:131,9,0
chr10	91199007	.	CTGGCTCGCACCCTAA	C	25335.41	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=13.447;DP=451;FS=25.173;HRun=0;HaplotypeScore=214.4777;InbreedingCoeff=0.9435;MQ=85.44;MQ0=0;MQRankSum=-13.572;QD=78.93;ReadPosRankSum=6.203;VQSLOD=3.1432;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,6648	0/0:10,0:10:27.09:0,27,1728	0/0:22,0:22:63.22:0,63,3526	0/0:19,0:19:54.19:0,54,2917	1/1:1,8:9:9.03:410,9,0	1/1:0,15:15:39.13:1771,39,0	1/1:3,19:22:48.16:2187,48,0	1/1:8,3:11:9.03:238,9,0	1/1:3,19:22:42.14:1914,42,0	1/1:4,14:18:42.08:1684,42,0	1/1:1,9:10:9.03:401,9,0	1/1:0,13:13:30.10:1267,30,0	1/1:0,10:10:24.08:1094,24,0	1/1:3,16:20:45.15:2050,45,0	0/0:22,0:22:66.18:0,66,4178	1/1:3,10:13:24.08:1094,24,0	0/0:19,0:19:57.20:0,57,4037	1/1:3,11:14:24.08:1094,24,0	1/1:6,9:15:27.09:984,27,0	1/1:2,12:14:24.08:994,24,0	1/1:17,6:23:12.25:547,12,0	1/1:1,8:9:12.04:547,12,0	1/1:2,7:9:12.04:547,12,0	1/1:6,13:19:24.08:997,24,0	1/1:1,7:8:18.06:820,18,0	1/1:2,17:19:51.16:2100,51,0	1/1:5,12:17:30.10:1367,30,0	1/1:1,10:11:27.09:1230,27,0
chr10	91199726	.	T	TG	7170.37	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-8.959;DP=568;FS=8.333;HRun=2;HaplotypeScore=56.1769;InbreedingCoeff=0.9637;MQ=54.77;MQ0=15;MQRankSum=-2.556;QD=31.87;ReadPosRankSum=-0.661;VQSLOD=3.6172;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:93.27:0,93,1129	0/0:11,0:11:30.09:0,30,361	0/0:8,0:2:2.97:0,3,21	0/0:12,0:5:8.21:0,8,143	1/1:3,16:18:39.09:532,39,0	0/0:20,0:19:57.12:0,57,678	0/0:31,0:28:72.22:0,72,880	1/1:11,25:27:60.20:859,60,0	1/1:3,13:16:39.13:561,39,0	0/0:29,0:27:78.25:0,78,966	0/0:12,0:11:30.09:0,30,369	1/1:1,13:14:42.14:599,42,0	0/0:6,0:6:18.06:0,18,223	1/1:2,23:25:51.13:702,51,0	0/0:31,0:29:93.28:0,93,1141	0/0:24,0:24:69.22:0,69,856	0/0:35,0:35:96.30:0,96,1189	0/0:21,0:21:63.20:0,63,780	1/1:2,12:11:33.07:449,33,0	1/1:2,14:14:36.12:518,36,0	1/1:3,30:31:66.21:950,66,0	0/0:10,0:10:27.06:0,27,312	0/0:9,0:9:27.08:0,27,334	0/0:32,0:32:93.28:0,93,1139	0/0:17,0:17:51.16:0,51,632	1/1:3,19:22:63.13:840,63,0	1/1:1,18:19:54.18:771,54,0	1/1:2,9:11:27.09:389,27,0
chr10	91199793	.	G	GCCTCTA	5893.52	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-4.317;DP=628;FS=0.000;HRun=0;HaplotypeScore=127.9940;InbreedingCoeff=0.9874;MQ=54.25;MQ0=9;MQRankSum=-3.747;QD=26.79;ReadPosRankSum=-5.518;VQSLOD=3.2005;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:78.05:0,78,1254	0/0:7,0:7:21.06:0,21,409	0/0:21,0:7:21:0,21,316	0/0:24,0:13:23.14:0,23,339	1/1:19,1:20:38.57:280,39,0	0/0:25,0:24:53.94:0,54,641	0/0:28,0:28:74.88:0,75,1367	1/1:33,0:32:71.84:602,72,0	1/1:7,4:11:26.72:513,27,0	0/0:25,0:26:69.13:0,69,961	0/0:8,0:7:17.98:0,18,273	1/1:8,6:14:29.95:612,30,0	0/0:15,0:15:45.13:0,45,929	1/1:16,8:23:62.57:1011,63,0	0/0:43,0:41:99:0,108,1855	0/0:32,0:32:84.19:0,84,1553	0/0:29,0:29:69.13:0,69,1210	0/0:21,0:21:57.07:0,57,926	1/1:21,0:19:36.42:490,36,0	1/1:10,1:11:17.94:290,18,0	1/1:31,0:30:35.46:309,35,0	0/0:13,0:13:35.92:0,36,379	0/0:17,0:17:38.82:0,39,568	0/0:41,0:41:99:0,111,2079	0/0:24,0:24:56.99:0,57,674	1/1:23,6:28:48.88:863,49,0	1/1:19,4:23:50.93:696,51,0	1/1:1,2:3:9.01:229,9,0
chr10	91199992	.	ATT	A	6894.92	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=6.478;DP=411;FS=9.309;HRun=11;HaplotypeScore=56.1746;InbreedingCoeff=0.8322;MQ=59.92;MQ0=4;MQRankSum=-1.896;QD=22.24;ReadPosRankSum=0.092;VQSLOD=3.2923;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:38:95.98:0,96,1386	0/0:11,0:12:32.60:0,33,470	0/0:12,0:6:17.92:0,18,212	0/1:10,0:5:10.44:10,0,107	1/1:5,18:23:51.12:541,51,0	1/1:2,11:13:25.73:311,26,0	1/1:1,8:9:24.06:255,24,0	1/1:7,22:29:59.68:614,60,0	1/1:1,5:6:1.73:115,2,0	1/1:2,18:20:45.09:479,45,0	1/1:1,8:9:21.03:224,21,0	1/1:0,5:5:12.03:128,12,0	1/1:5,6:10:15.01:160,15,0	1/1:1,8:9:15.04:160,15,0	0/0:16,0:16:45.15:0,45,690	1/1:1,10:11:27.05:286,27,0	0/0:23,0:22:57.13:0,57,824	1/1:1,10:11:27.06:287,27,0	1/1:4,9:10:23.42:231,23,0	1/1:3,21:24:60.14:639,60,0	1/1:6,9:15:24.04:255,24,0	1/1:2,5:7:15.03:158,15,0	1/1:0,7:7:18.05:192,18,0	1/1:0,9:9:18.05:192,18,0	1/1:3,8:11:20.94:223,21,0	1/1:6,19:25:54.10:574,54,0	1/1:3,15:18:42.07:447,42,0	1/1:1,14:15:39.09:414,39,0
chr10	91200335	.	C	CG	5197.17	PASS	AB=0.520;AC=21;AF=0.375;AN=56;BaseQRankSum=-10.991;DP=407;FS=24.575;HRun=0;HaplotypeScore=51.6944;InbreedingCoeff=0.8482;MQ=72.04;MQ0=0;MQRankSum=-0.981;QD=25.86;ReadPosRankSum=4.924;VQSLOD=3.4725;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:30.38:0,30,226	0/0:2,0:2:6.01:0,6,68	0/0:14,0:12:29.18:0,29,263	0/0:13,0:13:16.24:0,16,226	1/1:0,13:13:24.07:303,24,0	0/0:11,0:11:26.99:0,27,287	0/0:24,0:24:59.98:0,60,594	1/1:1,16:17:47.23:502,47,0	1/1:1,16:17:39.10:522,39,0	0/0:5,0:5:11.93:0,12,111	0/0:5,0:5:3.26:0,3,113	1/1:1,16:17:24.05:306,24,0	0/0:5,0:5:11.99:0,12,131	1/1:1,12:14:18.87:268,19,0	0/0:10,0:9:26.94:0,27,318	0/0:12,0:12:33.03:0,33,361	0/0:23,0:22:56.38:0,56,646	0/0:16,0:16:37.90:0,38,368	1/1:1,11:12:26.72:338,27,0	1/1:1,8:9:23.67:292,24,0	1/1:2,64:66:99:1744,129,0	0/0:7,0:7:3.48:0,3,42	0/0:5,0:5:11.88:0,12,117	0/0:24,0:24:64.69:0,65,650	0/0:7,0:7:11.74:0,12,89	0/1:1,12:13:8.75:356,0,9	1/1:1,13:14:24.05:323,24,0	1/1:0,9:9:18.06:243,18,0
chr10	91200550	.	TCTTATATC	T	9368.17	PASS	AB=0.727;AC=22;AF=0.393;AN=56;BaseQRankSum=14.294;DP=484;FS=1.785;HRun=0;HaplotypeScore=126.3238;InbreedingCoeff=0.8236;MQ=80.59;MQ0=0;MQRankSum=-12.847;QD=58.19;ReadPosRankSum=-1.074;VQSLOD=4.7761;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,6051	0/0:6,0:6:18.05:0,18,718	0/0:26,0:25:75.26:0,75,3292	0/0:21,0:20:57.16:0,57,1921	1/1:0,10:10:21.07:525,21,0	0/0:17,0:17:51.18:0,51,2228	0/0:23,0:23:69.15:0,69,2936	1/1:0,27:27:81.21:2099,81,0	1/1:0,12:12:33.11:990,33,0	0/0:24,0:23:72.24:0,72,3114	0/0:13,0:13:39.13:0,39,1804	1/1:0,13:13:27.09:815,27,0	0/0:15,0:15:45.14:0,45,1919	1/1:0,9:9:24.08:724,24,0	0/0:17,0:16:48.16:0,48,2137	0/1:14,1:15:45.49:45,0,1672	0/0:34,0:34:99:0,102,4418	0/0:16,0:16:48.13:0,48,1949	1/1:0,13:13:39.03:942,39,0	1/1:0,3:3:9.03:272,9,0	1/1:0,26:26:30.10:806,30,0	0/0:15,0:15:45.15:0,45,1976	0/0:12,0:12:33.11:0,33,1525	0/0:25,0:25:75.26:0,75,3429	0/0:13,0:13:36.12:0,36,1665	0/1:1,14:15:93.51:1095,0,94	1/1:0,16:16:30.10:873,30,0	1/1:0,2:2:6.02:181,6,0
chr10	91200984	.	C	CA	864.59	PASS	AB=0.833;AC=39;AF=0.722;AN=54;BaseQRankSum=7.569;DP=375;FS=0.690;HRun=11;HaplotypeScore=132.9468;InbreedingCoeff=0.5774;MQ=39.34;MQ0=13;MQRankSum=-6.840;QD=3.08;ReadPosRankSum=-5.437;VQSLOD=-0.6957;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:47.08:0,47,369	0/0:4,0:4:8.96:0,9,70	./.	0/0:9,0:3:6.03:0,6,32	1/1:24,0:23:12.86:31,13,0	1/1:7,2:10:11.49:89,11,0	1/1:11,0:11:2.45:18,2,0	1/1:18,0:17:4.50:41,4,0	1/1:13,0:12:2.79:6,3,0	1/1:22,1:25:6.57:100,7,0	0/1:12,2:15:2.02:63,0,2	1/1:11,0:11:6.98:16,7,0	0/0:7,0:7:0.14:0,0,0	1/1:7,0:7:3.74:20,4,0	0/0:10,0:10:20.90:0,21,162	1/1:7,0:9:1.61:57,2,0	0/0:28,0:28:65.37:0,65,509	1/1:12,0:12:6.33:22,6,0	1/1:17,0:14:9.24:46,9,0	1/1:14,0:12:4.92:16,5,0	1/1:5,0:5:4.27:12,4,0	1/1:6,1:7:9.32:60,9,0	1/1:9,2:12:12.71:89,13,0	0/0:10,0:11:0.97:0,1,14	1/1:11,1:14:19:122,19,0	1/1:22,1:22:18.29:72,18,0	1/1:17,0:17:11.50:26,11,0	1/1:16,0:15:19.32:120,19,0
chr10	91200995	.	ATAT	A	6352.79	PASS	AB=0.837;AC=38;AF=0.679;AN=56;BaseQRankSum=5.443;DP=305;FS=0.512;HRun=0;HaplotypeScore=121.8465;InbreedingCoeff=0.5333;MQ=45.49;MQ0=1;MQRankSum=-7.614;QD=26.81;ReadPosRankSum=-3.603;VQSLOD=4.2047;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:53.39:0,53,996	0/0:5,0:5:12.04:0,12,232	0/0:4,0:3:5.72:0,6,79	0/0:3,0:3:9.03:0,9,170	1/1:4,12:21:60.18:867,60,0	1/1:5,0:7:11.46:80,11,0	0/1:5,1:7:1.78:71,0,2	1/1:1,4:16:33.52:486,34,0	1/1:3,4:7:17.72:283,18,0	1/1:17,0:23:24.69:275,25,0	1/1:9,1:10:16:131,16,0	1/1:1,7:10:30.10:476,30,0	0/1:4,0:4:11.19:21,0,11	1/1:0,3:4:12.04:187,12,0	0/0:9,0:9:27.07:0,27,532	0/1:6,0:8:21.49:58,0,21	0/0:27,0:27:69.17:0,69,1368	1/1:4,0:6:12.71:114,13,0	1/1:3,5:11:30.05:406,30,0	1/1:3,4:10:30.10:417,30,0	1/1:0,3:5:12.04:182,12,0	0/1:6,0:7:1.22:51,0,1	1/1:6,1:10:19.66:182,20,0	0/1:3,0:5:6.23:18,0,6	0/1:10,0:12:10.56:81,0,11	1/1:4,13:21:50.35:857,50,0	1/1:2,11:17:42.14:684,42,0	1/1:7,6:13:32.96:425,33,0
chr10	91200997	.	ATAT	A	6394.66	PASS	AB=0.967;AC=38;AF=0.679;AN=56;BaseQRankSum=5.693;DP=307;FS=1.065;HRun=0;HaplotypeScore=123.8215;InbreedingCoeff=0.5121;MQ=46.10;MQ0=1;MQRankSum=-6.160;QD=27.10;ReadPosRankSum=-3.500;VQSLOD=4.4168;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.17:0,54,1210	0/0:5,0:5:12.04:0,12,276	0/0:5,0:4:5.74:0,6,104	0/0:3,0:3:9.03:0,9,210	1/1:16,3:21:60.17:868,60,0	1/1:7,0:7:10.58:76,11,0	0/1:6,0:6:3.43:69,0,3	1/1:15,1:16:24.23:484,24,0	1/1:10,0:10:24.05:332,24,0	1/1:23,0:23:22.78:280,23,0	1/1:10,0:10:14.59:135,15,0	1/1:11,0:12:36.09:530,36,0	0/1:3,0:4:12.38:19,0,12	1/1:3,1:4:12.04:191,12,0	0/0:9,0:9:27.08:0,27,610	0/1:8,0:8:23.78:53,0,24	0/0:28,0:28:75.25:0,75,1677	1/1:5,0:5:11.47:110,11,0	1/1:9,2:11:30.05:405,30,0	1/1:11,0:11:33.09:441,33,0	1/1:3,1:5:12.04:182,12,0	0/1:7,0:7:3.04:50,0,3	1/1:10,0:10:19.77:193,20,0	0/1:5,0:5:7.18:17,0,7	0/1:12,0:12:14.50:76,0,15	1/1:19,0:21:35.36:837,35,0	1/1:16,1:18:45.12:705,45,0	1/1:7,1:7:21.07:340,21,0
chr10	91201030	.	CAA	C	2145.55	PASS	AB=0.768;AC=21;AF=0.375;AN=56;BaseQRankSum=1.754;DP=509;FS=8.480;HRun=16;HaplotypeScore=175.3119;InbreedingCoeff=0.6392;MQ=69.55;MQ0=1;MQRankSum=-5.234;QD=10.47;ReadPosRankSum=2.518;VQSLOD=0.8646;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,1:21:2.50:0,3,282	0/0:4,0:5:11.21:0,11,82	0/0:43,0:19:20.86:0,21,154	0/1:19,0:10:2.09:2,0,47	0/0:29,0:29:77.83:0,78,733	0/1:8,7:16:0.28:183,0,0	1/1:5,5:10:13.60:123,14,0	0/0:22,0:22:47.66:0,48,364	0/0:16,0:16:41.95:0,42,376	0/1:18,18:37:5.21:447,0,5	1/1:8,10:19:41.10:281,41,0	0/0:17,0:17:47.98:0,48,447	0/1:5,4:9:17.19:101,0,17	0/0:7,0:7:20.98:0,21,181	0/1:7,2:9:10.07:10,0,126	1/1:7,7:14:31.19:249,31,0	0/0:38,0:39:86.52:0,87,922	1/1:4,5:11:17.70:126,18,0	0/0:13,0:13:26.88:0,27,222	0/0:25,0:25:74.65:0,75,613	0/0:9,0:9:17.93:0,18,139	1/1:2,9:14:32.06:228,32,0	1/1:7,9:20:25.11:230,25,0	1/1:7,7:14:24.74:190,25,0	1/1:3,8:13:1.22:172,1,0	0/0:26,1:27:43.53:0,44,498	0/0:21,0:21:57.01:0,57,561	0/0:10,0:10:29.98:0,30,274
chr10	91201077	.	C	CA	6519.22	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-0.674;DP=532;FS=11.982;HRun=7;HaplotypeScore=96.0144;InbreedingCoeff=0.9912;MQ=61.39;MQ0=0;MQRankSum=-1.528;QD=27.86;ReadPosRankSum=1.430;VQSLOD=4.3384;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:42.06:0,42,405	0/0:6,0:6:12.01:0,12,116	0/0:17,0:9:27.04:0,27,258	0/0:12,0:10:29.96:0,30,260	1/1:4,22:26:63.19:760,63,0	0/0:15,0:15:30.03:0,30,284	0/0:19,0:19:51.08:0,51,492	1/1:4,13:17:13.45:409,13,0	1/1:3,21:24:60.18:724,60,0	0/0:21,0:21:42.05:0,42,405	0/0:21,0:21:54.07:0,54,520	1/1:5,12:17:36.11:435,36,0	0/0:13,0:13:27.03:0,27,261	1/1:1,12:13:39.12:470,39,0	0/0:13,0:13:30.04:0,30,290	0/0:13,0:13:24.02:0,24,232	0/0:30,0:30:69.08:0,69,660	0/0:14,0:14:29.96:0,30,289	1/1:4,15:19:42.13:506,42,0	1/1:5,29:34:78.19:919,78,0	1/1:2,18:20:42.13:507,42,0	0/0:21,0:20:39.04:0,39,377	0/0:25,0:25:54.08:0,54,521	0/0:25,0:25:59.75:0,60,571	0/0:15,0:15:26.99:0,27,261	1/1:5,20:24:63.19:757,63,0	1/1:4,17:21:44.94:526,45,0	1/1:3,15:18:42.13:507,42,0
chr10	91202024	.	G	GAAA	8717.34	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-6.082;DP=471;FS=2.155;HRun=10;HaplotypeScore=70.2821;InbreedingCoeff=0.8880;MQ=56.25;MQ0=8;MQRankSum=-1.169;QD=25.87;ReadPosRankSum=-1.024;VQSLOD=3.3876;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:48:99:0,121,1403	0/0:12,0:12:23.07:0,23,269	0/0:10,0:4:10.97:0,11,80	0/0:12,0:8:23.82:0,24,196	1/1:1,10:13:20.88:272,21,0	1/1:5,15:20:33.11:616,33,0	1/1:5,8:13:15.05:289,15,0	1/1:11,19:31:44.97:871,45,0	1/1:4,4:8:8.92:173,9,0	1/1:1,14:15:39.03:667,39,0	1/1:6,4:13:21.01:299,21,0	1/1:7,5:13:24.06:383,24,0	1/1:1,6:7:6.02:98,6,0	1/1:4,12:16:9.03:173,9,0	0/0:13,0:13:27.06:0,27,313	1/1:2,14:15:20.86:404,21,0	0/0:39,0:39:96.19:0,96,1148	1/1:10,11:22:27:485,27,0	1/1:4,12:19:39.07:603,39,0	1/1:5,6:11:23.85:326,24,0	1/1:2,10:13:15.94:290,16,0	1/1:2,1:5:9.01:136,9,0	1/1:0,8:12:26.93:469,27,0	1/1:4,18:24:33.56:586,34,0	1/1:3,6:10:6.02:115,6,0	1/1:8,14:20:46.66:748,47,0	1/1:4,15:21:33.09:599,33,0	1/1:3,3:6:6.02:115,6,0
chr10	91202318	.	G	GGGCAGCAACCC	1071.50	PASS	AB=0.708;AC=20;AF=0.909;AN=22;BaseQRankSum=-2.665;DP=108;FS=10.193;HRun=0;HaplotypeScore=147.9902;InbreedingCoeff=-0.2358;MQ=53.21;MQ0=0;MQRankSum=-2.736;QD=16.48;ReadPosRankSum=-0.675;VQSLOD=2.0177;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:9.01:165,9,0	./.	0/1:2,0:4:35.17:147,0,35	0/1:6,1:9:61.92:330,0,62	./.	./.	1/1:6,0:6:6:74,6,0	1/1:13,0:13:3.01:74,3,0	./.	./.	./.	./.	./.	./.	1/1:7,0:7:3.01:40,3,0	1/1:9,0:9:12:148,12,0	./.	./.	1/1:3,0:3:6.02:90,6,0	./.	1/1:2,0:2:3.01:43,3,0	./.	1/1:3,0:2:2.99:23,3,0	./.	./.	./.	1/1:4,0:4:2.99:24,3,0	./.
chr10	91203596	.	G	GGTGTGT	3478.94	PASS	AB=0.840;AC=42;AF=0.778;AN=54;BaseQRankSum=4.923;DP=713;FS=5.086;HRun=0;HaplotypeScore=180.4378;InbreedingCoeff=0.4997;MQ=46.22;MQ0=43;MQRankSum=-7.591;QD=6.55;ReadPosRankSum=-4.603;VQSLOD=1.2671;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:46:85.94:0,86,1526	0/0:5,0:4:6.45:0,6,48	0/0:47,0:19:3.01:0,3,40	0/0:54,0:15:1.82:0,2,5	1/1:24,0:24:2.68:11,3,0	1/1:13,8:23:15.05:299,15,0	1/1:20,8:35:8.03:93,8,0	1/1:14,0:20:37.84:347,38,0	1/1:26,0:23:2.03:6,2,0	1/1:21,1:22:24.08:571,24,0	./.	1/1:23,0:27:2.71:42,3,0	1/1:12,8:20:5.69:174,6,0	1/1:19,0:16:6.01:65,6,0	0/1:23,0:26:0.48:0,0,679	1/1:11,8:17:14.98:332,15,0	0/0:16,0:17:42.14:0,42,836	1/1:12,3:16:19.62:454,20,0	1/1:23,0:24:13.43:87,13,0	1/1:17,0:15:2.83:18,3,0	1/1:51,0:45:9.43:102,9,0	1/1:13,2:16:6.01:108,6,0	0/1:9,5:16:53.39:67,0,53	1/1:20,15:37:2.22:56,2,0	1/1:8,8:18:12.04:304,12,0	1/1:22,0:22:25.38:134,25,0	1/1:11,0:11:9.18:92,9,0	1/1:12,0:12:10.46:116,10,0
chr10	91203622	.	TGGC	T	617.71	PASS	AB=0.949;AC=17;AF=0.315;AN=54;BaseQRankSum=4.862;DP=672;FS=16.781;HRun=0;HaplotypeScore=155.5274;InbreedingCoeff=0.0659;MQ=37.39;MQ0=57;MQRankSum=-1.861;QD=2.46;ReadPosRankSum=-2.938;VQSLOD=1.1706;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:99:0,117,2218	0/0:8,0:8:24.04:0,24,396	0/0:78,0:10:21.02:0,21,332	0/0:84,1:14:14.52:0,15,403	0/0:21,1:23:2.71:0,3,58	0/1:12,0:13:33.77:74,0,34	0/0:30,0:28:6.59:0,7,90	0/1:27,0:26:42.59:43,0,1027	0/0:15,3:17:8.63:0,9,76	0/1:12,0:12:54.84:55,0,230	./.	0/1:19,0:19:12.37:12,0,26	0/0:13,0:13:5.14:0,5,52	1/1:16,0:14:5.42:33,5,0	0/0:22,0:22:38.45:0,38,1057	0/0:15,0:13:6.61:0,7,226	0/0:18,0:18:51.10:0,51,1069	0/0:18,0:17:30.03:0,30,459	0/0:16,0:14:20.66:0,21,500	1/1:10,0:10:3.28:24,3,0	0/1:37,0:32:26.31:26,0,115	1/1:16,0:16:5.40:59,5,0	0/0:12,0:13:9.03:0,9,168	0/1:28,0:28:22.16:22,0,43	1/1:16,0:16:11.63:140,12,0	0/1:19,1:20:99:176,0,198	0/1:12,0:11:54.87:55,0,135	0/1:8,0:8:61.81:62,0,68
chr10	91203634	.	GTGT	G	114.73	PASS	AB=0.960;AC=8;AF=0.148;AN=54;BaseQRankSum=5.852;DP=591;FS=0.000;HRun=0;HaplotypeScore=143.0189;InbreedingCoeff=0.0156;MQ=34.55;MQ0=44;MQRankSum=-4.070;QD=1.21;ReadPosRankSum=1.184;VQSLOD=2.2878;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:99:0,108,2609	0/0:7,0:7:21.07:0,21,493	0/0:85,0:8:21.07:0,21,507	0/0:88,0:15:40.02:0,40,838	0/0:23,0:23:5.76:0,6,122	0/0:10,0:10:2.06:0,2,70	0/0:19,0:18:2.88:0,3,74	0/0:20,0:19:54.18:0,54,1266	0/1:12,0:9:14.04:14,0,63	0/1:8,2:10:94.25:94,0,349	./.	0/0:17,0:16:2.41:0,2,48	0/1:9,0:9:39.63:40,0,45	0/1:14,0:13:14.08:14,0,47	0/0:19,0:19:57.20:0,57,1302	0/0:9,1:10:12.02:0,12,293	0/0:18,0:18:54.18:0,54,1206	0/0:18,0:17:30.07:0,30,552	0/0:16,0:11:26.91:0,27,614	0/0:11,0:9:2.80:0,3,36	0/0:31,0:24:11.64:0,12,232	0/1:12,1:13:0.13:0,0,0	0/0:13,0:13:9.03:0,9,222	0/0:24,1:24:2.58:0,3,74	1/1:13,1:14:4.79:22,5,0	0/1:23,0:21:51.60:52,0,431	0/0:10,0:9:5.96:0,6,242	0/0:7,0:7:2.97:0,3,159
chr10	91203638	.	GCACA	G	44.02	PASS	AB=0.966;AC=8;AF=0.148;AN=54;BaseQRankSum=4.496;DP=530;FS=5.900;HRun=0;HaplotypeScore=135.6322;InbreedingCoeff=0.0907;MQ=35.20;MQ0=32;MQRankSum=-0.939;QD=0.56;ReadPosRankSum=-2.443;VQSLOD=1.1759;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:99:0,108,3108	0/0:8,0:8:24.08:0,24,695	0/0:82,0:8:21.07:0,21,545	0/0:89,0:15:38.38:0,38,983	0/0:17,0:17:5.77:0,6,135	0/0:9,0:10:5.23:0,5,118	0/0:17,0:16:1.55:0,2,86	0/0:16,0:16:48.13:0,48,1245	0/1:9,0:8:17.18:17,0,78	0/0:11,0:11:7.05:0,7,455	./.	0/1:14,1:15:3.30:3,0,28	0/0:8,0:8:4.48:0,4,84	1/1:10,1:10:4.45:40,4,0	0/0:17,0:17:51.18:0,51,1454	0/0:10,0:10:13.73:0,14,345	0/0:15,0:15:45.15:0,45,1301	0/0:18,0:17:29.90:0,30,621	0/0:11,0:10:29.86:0,30,720	0/0:6,1:7:0.53:0,1,2	0/0:18,3:19:8.76:0,9,204	0/1:12,0:12:0:1,0,0	0/0:11,0:11:9.03:0,9,261	0/0:23,0:22:0.22:0,0,83	0/0:9,1:10:3.84:0,4,40	0/1:18,0:17:8.49:8,0,263	0/1:8,0:8:4.74:5,0,185	0/1:5,1:6:79.77:80,0,128
chr10	91203642	.	ATGTGTGTGTGCGCG	A	4681.49	PASS	AB=0.604;AC=39;AF=0.696;AN=56;BaseQRankSum=4.696;DP=538;FS=5.113;HRun=0;HaplotypeScore=169.9766;InbreedingCoeff=0.6636;MQ=36.18;MQ0=28;MQRankSum=-5.159;QD=17.02;ReadPosRankSum=0.039;VQSLOD=3.4656;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:59.73:0,60,2642	0/0:8,0:8:24.08:0,24,1469	0/0:78,0:9:11.78:0,12,105	0/0:81,0:15:14.17:0,14,368	0/1:7,10:17:0:0,0,0	1/1:8,3:11:8.63:235,9,0	1/1:19,2:20:4.53:144,5,0	1/1:15,0:15:24.03:333,24,0	1/1:10,2:11:8.70:168,9,0	1/1:13,2:15:35.99:659,36,0	0/1:2,7:9:0:0,0,0	1/1:9,6:15:5.91:102,6,0	1/1:3,5:8:6.02:179,6,0	1/1:8,5:12:8.54:196,9,0	0/0:18,0:18:33.11:0,33,1652	1/1:12,1:13:8.67:159,9,0	0/0:16,0:16:42.13:0,42,1701	1/1:7,11:18:20.95:454,21,0	1/1:10,2:10:17.92:323,18,0	1/1:5,4:9:0.84:2,1,0	0/0:22,1:21:0.46:0,0,1	0/1:5,8:13:0:0,0,0	1/1:8,2:10:3:25,3,0	1/1:21,3:23:3.35:24,3,0	1/1:5,4:9:5.89:158,6,0	1/1:4,14:17:28.12:1079,28,0	1/1:6,2:8:8.88:260,9,0	1/1:3,2:5:3.35:180,3,0
chr10	91203734	.	T	TGAGAGA	4313.31	PASS	AB=0.994;AC=28;AF=0.500;AN=56;BaseQRankSum=6.067;DP=626;FS=11.085;HRun=0;HaplotypeScore=178.4399;InbreedingCoeff=-0.2369;MQ=47.14;MQ0=24;MQRankSum=0.904;QD=8.70;ReadPosRankSum=-2.081;VQSLOD=3.0392;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:68.74:0,69,1639	0/0:8,0:8:8.75:0,9,118	0/0:6,0:1:0:0,0,0	0/0:16,0:7:12.04:0,12,263	0/1:15,0:14:52.43:52,0,146	1/1:31,1:30:16.33:560,16,0	1/1:29,0:28:37.12:534,37,0	0/1:7,0:6:7.75:8,0,106	0/1:31,0:28:99:158,0,269	1/1:28,0:25:5.38:627,5,0	0/1:16,0:16:6.88:220,0,7	0/1:30,0:29:67.85:68,0,515	0/1:23,0:23:44.08:126,0,44	0/1:20,0:19:52.82:53,0,118	0/0:29,0:27:50.17:0,50,961	0/1:26,1:27:23.83:264,0,24	0/0:35,0:34:78.41:0,78,1395	0/1:15,0:14:55.46:208,0,55	0/1:16,0:13:16.76:17,0,199	0/1:13,0:11:30.86:31,0,31	0/1:38,0:37:99:169,0,184	1/1:21,0:21:1.74:164,2,0	1/1:8,1:9:0.13:20,0,0	1/1:42,1:42:20.44:543,20,0	0/1:17,1:18:28.45:208,0,28	0/1:28,0:27:99:145,0,521	0/1:25,0:24:99:113,0,181	0/1:12,0:11:24.12:24,0,119
chr10	91203736	.	T	TGAGAGA	7676.53	PASS	AB=1.000;AC=39;AF=0.722;AN=54;BaseQRankSum=0.571;DP=633;FS=45.009;HRun=0;HaplotypeScore=171.7551;InbreedingCoeff=0.5746;MQ=48.09;MQ0=23;MQRankSum=-1.489;QD=15.54;ReadPosRankSum=-1.806;VQSLOD=2.5666;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:57.17:0,57,1049	0/0:9,0:9:11.68:0,12,149	0/0:4,0:1:0:0,0,0	0/0:17,0:10:14.33:0,14,215	1/1:16,0:15:9.03:176,9,0	1/1:32,0:30:17.63:763,18,0	1/1:29,0:28:36.10:703,36,0	1/1:8,0:7:8.05:84,8,0	1/1:27,3:28:29.34:538,29,0	1/1:31,0:28:42.05:817,42,0	1/1:18,0:18:17.98:356,18,0	1/1:27,1:27:6.51:272,7,0	0/1:24,0:24:31.69:180,0,32	1/1:19,0:18:6.02:136,6,0	0/0:27,0:26:33.07:0,33,613	1/1:25,0:25:18.05:309,18,0	0/0:34,0:34:54.03:0,54,912	0/1:15,0:14:38.83:320,0,39	1/1:15,0:12:5.99:75,6,0	1/1:6,5:10:6.02:79,6,0	1/1:38,0:37:26.73:581,27,0	1/1:22,0:22:18.45:310,18,0	./.	1/1:44,0:43:31.80:649,32,0	1/1:18,0:18:15.03:276,15,0	0/1:29,0:28:33.18:400,0,33	1/1:27,0:26:26.21:499,26,0	1/1:12,1:12:12:154,12,0
chr10	91204283	.	A	AAAAAAG	11288.07	PASS	AB=0.679;AC=40;AF=0.714;AN=56;BaseQRankSum=-1.152;DP=484;FS=1.548;HRun=0;HaplotypeScore=87.2740;InbreedingCoeff=0.5427;MQ=53.93;MQ0=15;MQRankSum=-7.116;QD=30.43;ReadPosRankSum=2.081;VQSLOD=4.6323;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.13:0,93,1577	0/0:7,0:7:18.06:0,18,389	0/0:9,0:5:11.62:0,12,150	0/0:11,0:8:15.76:0,16,135	1/1:9,0:9:21.07:417,21,0	1/1:0,10:10:15.05:484,15,0	1/1:2,9:12:21.07:640,21,0	1/1:22,0:19:38.54:616,39,0	1/1:20,0:20:4.37:457,4,0	1/1:3,18:21:48.07:1291,48,0	0/1:4,11:17:11.64:186,0,12	1/1:16,0:15:12.03:240,12,0	1/1:1,11:12:1.24:654,1,0	1/1:15,0:13:12.02:222,12,0	0/0:21,0:20:51.02:0,51,775	1/1:4,11:14:17.89:544,18,0	0/0:33,0:31:80.99:0,81,1250	1/1:5,15:21:6.79:203,7,0	1/1:21,0:18:49.76:768,50,0	1/1:12,0:11:24.08:481,24,0	0/1:17,0:16:9.48:625,0,9	0/1:5,13:20:24.08:469,0,24	1/1:3,20:21:24.06:768,24,0	0/1:4,10:14:35.43:497,0,35	1/1:2,12:16:12.03:387,12,0	1/1:24,0:24:15.22:860,15,0	1/1:22,0:20:20.75:420,21,0	1/1:5,0:4:2.36:59,2,0
chr10	91204284	.	A	AAAAAG	11489.12	PASS	AB=0.909;AC=38;AF=0.679;AN=56;BaseQRankSum=-4.301;DP=496;FS=1.466;HRun=0;HaplotypeScore=81.4349;InbreedingCoeff=0.4271;MQ=54.42;MQ0=14;MQRankSum=-7.982;QD=29.92;ReadPosRankSum=3.747;VQSLOD=4.7402;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.15:0,93,1512	0/0:6,0:6:18.06:0,18,366	0/0:9,0:5:11.63:0,12,155	0/0:11,0:8:16.20:0,16,140	1/1:0,9:9:21.07:589,21,0	1/1:12,0:11:15.03:324,15,0	1/1:13,1:12:21.07:473,21,0	1/1:8,16:25:51.46:1016,51,0	1/1:2,19:22:4.29:654,4,0	1/1:22,0:21:7.24:786,7,0	0/1:17,0:17:42.34:98,0,42	1/1:2,15:16:12.01:339,12,0	1/1:12,0:12:1.21:430,1,0	1/1:4,10:15:12.02:320,12,0	0/0:21,0:20:54.03:0,54,818	0/1:14,1:14:3.65:388,0,4	0/0:33,0:31:81.15:0,81,1268	0/1:20,0:20:20.88:145,0,21	1/1:6,15:19:50.94:1063,51,0	1/1:2,12:14:27.06:707,27,0	0/1:1,15:16:3.62:895,0,4	0/1:18,0:18:56.28:327,0,56	1/1:24,0:21:10.15:498,10,0	0/1:15,0:14:35.40:371,0,35	1/1:16,0:15:12.03:259,12,0	1/1:4,19:23:9.67:1132,10,0	1/1:1,20:23:21.44:593,21,0	1/1:3,2:4:1.40:82,1,0
chr10	91204495	.	G	GA	7411.81	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-12.788;DP=652;FS=11.039;HRun=8;HaplotypeScore=63.5173;InbreedingCoeff=0.9975;MQ=80.39;MQ0=0;MQRankSum=-1.125;QD=28.29;ReadPosRankSum=0.728;VQSLOD=4.8314;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,108,988	0/0:5,0:5:15.01:0,15,137	0/0:26,1:27:56.25:0,56,491	0/0:25,0:23:41.63:0,42,372	1/1:4,13:17:39.12:449,39,0	0/0:13,0:13:33.01:0,33,302	0/0:27,2:28:34.34:0,34,551	1/1:5,16:21:42.12:485,42,0	1/1:6,24:30:66.20:762,66,0	0/0:35,0:35:84.04:0,84,768	0/0:12,0:12:33.02:0,33,302	1/1:1,16:17:48.14:554,48,0	0/0:11,0:11:33.02:0,33,302	1/1:4,17:21:54.16:622,54,0	0/0:27,0:27:75.04:0,75,687	0/0:18,0:18:51.03:0,51,467	0/0:31,0:31:84.03:0,84,769	0/0:23,0:23:69.04:0,69,631	1/1:1,15:16:45.12:509,45,0	1/1:6,18:24:57.12:633,57,0	1/1:3,19:22:47.08:583,47,0	0/0:19,0:19:48.01:0,48,439	0/0:16,0:15:36.02:0,36,329	0/0:30,0:30:81.03:0,81,741	0/0:23,0:23:63.03:0,63,576	1/1:4,33:37:74.76:1085,75,0	1/1:0,37:37:96.29:1108,96,0	1/1:0,20:20:54.16:623,54,0
chr10	91205413	.	T	TCACA	3661.38	PASS	AB=0.845;AC=47;AF=0.904;AN=52;BaseQRankSum=1.382;DP=616;FS=1.757;HRun=0;HaplotypeScore=129.1966;InbreedingCoeff=0.0235;MQ=67.71;MQ0=12;MQRankSum=-0.388;QD=6.55;ReadPosRankSum=-1.213;VQSLOD=2.7752;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:36:22.31:22,0,78	0/1:7,0:7:0:0,0,0	0/1:44,0:30:0:0,0,0	./.	1/1:10,0:10:3.01:60,3,0	1/1:18,0:18:12.03:224,12,0	1/1:26,0:25:3.01:43,3,0	1/1:20,0:19:5.94:41,6,0	1/1:14,0:14:12.04:224,12,0	1/1:21,0:21:31.03:460,31,0	./.	1/1:13,5:19:9.03:211,9,0	1/1:10,0:13:12.01:178,12,0	1/1:9,8:19:5.52:140,6,0	0/1:22,0:30:31.81:32,0,49	1/1:15,0:19:6.02:104,6,0	0/1:17,0:30:18.53:44,0,19	1/1:18,0:25:10.85:162,11,0	1/1:12,0:12:9.03:170,9,0	1/1:16,0:15:5.67:36,6,0	1/1:20,7:36:5.38:78,5,0	1/1:17,0:15:8.76:131,9,0	1/1:22,0:21:5.70:87,6,0	1/1:30,0:30:21.04:371,21,0	1/1:11,0:11:12.04:191,12,0	1/1:20,0:20:20.75:266,21,0	1/1:16,10:28:18.02:358,18,0	1/1:5,0:13:5.54:25,6,0
chr10	91206755	.	G	GA	6021.49	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-12.009;DP=570;FS=12.412;HRun=9;HaplotypeScore=56.9308;InbreedingCoeff=0.9200;MQ=70.43;MQ0=1;MQRankSum=-0.364;QD=22.47;ReadPosRankSum=0.157;VQSLOD=4.7868;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:64.25:0,64,743	0/0:11,0:11:32.99:0,33,286	0/0:23,0:16:24.45:0,24,158	0/1:18,0:15:42.76:43,0,91	1/1:2,16:18:42.06:450,42,0	0/0:15,1:16:11.80:0,12,327	0/0:12,0:12:35.98:0,36,309	1/1:13,28:42:80.56:855,81,0	1/1:0,21:21:54.15:597,54,0	0/0:20,0:20:53.99:0,54,469	0/0:18,0:18:50.99:0,51,442	1/1:5,18:23:27.26:506,27,0	0/0:14,0:14:35.99:0,36,313	1/1:1,17:18:45.12:498,45,0	0/0:23,0:23:59.96:0,60,517	0/0:15,0:15:41.97:0,42,361	0/0:18,0:19:22.85:0,23,416	0/0:19,1:20:19.84:0,20,383	1/1:1,14:15:36.10:398,36,0	1/1:8,19:27:56.90:583,57,0	1/1:7,12:19:35.92:398,36,0	0/0:22,0:22:56.96:0,57,494	0/0:16,0:16:47.99:0,48,416	0/0:19,0:19:50.99:0,51,443	0/0:20,0:20:56.99:0,57,495	1/1:4,20:24:37.06:617,37,0	1/1:0,22:24:62.93:677,63,0	1/1:2,16:18:36.10:398,36,0
chr10	91207638	.	A	AT	4761.42	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-12.519;DP=511;FS=0.779;HRun=8;HaplotypeScore=47.7359;InbreedingCoeff=0.9392;MQ=66.86;MQ0=1;MQRankSum=-0.346;QD=25.19;ReadPosRankSum=2.235;VQSLOD=5.4305;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:87.02:0,87,792	0/0:12,0:12:33.02:0,33,302	0/1:15,0:10:1.18:1,0,46	0/0:9,0:8:14.04:0,14,114	0/0:32,0:32:78.01:0,78,708	1/1:4,12:16:36.11:415,36,0	1/1:1,11:12:30.09:346,30,0	0/0:29,0:29:65.99:0,66,593	0/0:15,0:15:39.01:0,39,353	1/1:3,14:17:42.08:470,42,0	1/1:2,22:24:63.10:697,63,0	0/0:16,0:16:42.02:0,42,384	1/1:2,8:10:21.06:242,21,0	0/0:11,0:11:27.01:0,27,247	0/0:17,0:17:41.49:0,41,358	1/1:2,16:18:42.12:485,42,0	0/0:40,0:40:99:0,105,934	1/1:1,25:26:47.76:803,48,0	0/0:29,0:29:72.02:0,72,656	0/0:13,0:13:38.97:0,39,342	0/0:16,0:16:44.98:0,45,399	1/1:1,5:6:15:158,15,0	1/1:2,11:13:30.09:346,30,0	1/1:2,16:18:39.12:450,39,0	1/1:1,13:14:30.09:346,30,0	0/0:29,0:29:74.99:0,75,676	0/0:11,0:10:18:0,18,164	0/0:8,1:9:7.35:0,7,151
chr10	91208564	.	AG	A	8042.69	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=18.409;DP=641;FS=12.783;HRun=3;HaplotypeScore=83.9630;InbreedingCoeff=0.9988;MQ=91.19;MQ0=0;MQRankSum=-1.357;QD=34.22;ReadPosRankSum=1.151;VQSLOD=4.2667;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,2054	0/0:18,0:18:54.18:0,54,777	0/0:28,0:28:84.28:0,84,1190	0/0:30,0:30:69.14:0,69,937	1/1:0,19:19:57.18:705,57,0	0/0:13,0:13:39.13:0,39,555	0/0:24,0:24:63.19:0,63,871	1/1:2,25:27:69.19:820,69,0	1/1:1,13:14:33.10:409,33,0	0/0:24,0:24:66.22:0,66,943	0/0:13,0:13:37.91:0,38,486	1/1:0,21:20:51.16:632,51,0	0/0:21,0:21:63.19:0,63,886	1/1:0,18:18:54.17:668,54,0	0/0:29,0:29:84.26:0,84,1172	0/0:25,0:25:72.24:0,72,1036	0/0:28,0:28:84.28:0,84,1208	0/0:21,0:21:63.15:0,63,847	1/1:0,22:22:66.12:771,66,0	1/1:0,17:17:51.16:631,51,0	1/1:2,38:40:99:1367,111,0	0/0:18,0:18:54.17:0,54,758	0/0:16,0:16:48.16:0,48,688	0/0:32,0:32:93.27:0,93,1282	0/0:16,0:16:48.15:0,48,673	1/1:0,32:32:96.25:1149,96,0	1/1:0,18:18:54.17:668,54,0	1/1:1,6:7:18.06:223,18,0
chr10	91208826	.	TTGTGTGTGTGTG	T	1529.39	PASS	AB=1.000;AC=15;AF=0.300;AN=50;BaseQRankSum=6.151;DP=579;FS=7.775;HRun=0;HaplotypeScore=189.3600;InbreedingCoeff=0.7024;MQ=53.91;MQ0=20;MQRankSum=-5.499;QD=9.21;ReadPosRankSum=0.648;VQSLOD=1.9786;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:21.07:0,21,778	0/0:9,0:11:12.04:0,12,438	./.	./.	0/0:12,0:12:9.01:0,9,119	1/1:9,1:13:6.02:186,6,0	1/1:27,4:30:5.98:104,6,0	0/0:18,0:18:14.40:0,14,230	0/0:10,0:19:21.07:0,21,490	1/1:27,3:28:8.81:308,9,0	0/0:11,4:16:0:0,0,0	0/0:22,0:26:21.07:0,21,446	1/1:16,5:21:11.82:384,12,0	0/0:20,0:19:12.04:0,12,206	0/0:19,0:21:36.12:0,36,1570	1/1:13,7:20:15.05:495,15,0	0/0:31,0:31:41.27:0,41,1715	0/1:19,0:19:1.36:38,0,1	0/0:18,0:17:8.15:0,8,130	0/0:11,0:15:6.02:0,6,81	0/0:45,0:44:42.13:0,42,914	1/1:9,3:11:3.01:103,3,0	0/0:9,2:10:0:0,0,0	0/0:35,5:38:0.89:0,1,2	1/1:14,4:18:5.98:72,6,0	0/0:22,0:20:15.05:0,15,239	0/0:15,0:17:15.52:0,16,283	./.
chr10	91209076	.	A	AT	4788.66	PASS	AB=0.833;AC=23;AF=0.411;AN=56;BaseQRankSum=-11.782;DP=556;FS=4.962;HRun=10;HaplotypeScore=86.7835;InbreedingCoeff=0.9201;MQ=77.17;MQ0=0;MQRankSum=1.085;QD=23.59;ReadPosRankSum=-2.552;VQSLOD=4.3610;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,878	0/1:4,1:5:17.03:17,0,79	0/0:18,0:17:15.16:0,15,103	0/0:14,0:13:14.89:0,15,117	1/1:3,21:24:51.06:528,51,0	0/0:17,0:18:46.97:0,47,375	0/0:20,0:20:53.92:0,54,443	1/1:6,25:31:72.13:742,72,0	1/1:2,13:16:14.32:340,14,0	0/0:28,0:28:59.56:0,60,475	0/0:12,0:12:32.96:0,33,270	1/1:3,12:15:30.07:314,30,0	0/0:16,0:16:38.90:0,39,313	1/1:3,10:13:33.07:345,33,0	0/0:22,0:22:38.92:0,39,317	0/0:23,0:23:65.90:0,66,536	0/0:32,0:32:83.86:0,84,685	0/0:22,0:24:66.98:0,67,525	1/1:3,10:13:30.06:313,30,0	1/1:2,11:13:30.04:309,30,0	1/1:4,22:26:51.13:542,51,0	0/0:22,0:23:55.95:0,56,449	0/0:29,0:29:74.80:0,75,607	0/0:17,0:17:44.94:0,45,369	0/0:18,0:18:47.90:0,48,389	1/1:1,16:18:50.95:508,51,0	1/1:0,18:18:48.12:511,48,0	1/1:1,10:11:30.08:320,30,0
chr10	91210775	.	AC	A	7989.12	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=8.902;DP=660;FS=0.618;HRun=5;HaplotypeScore=78.8447;InbreedingCoeff=0.9955;MQ=78.65;MQ0=0;MQRankSum=-1.526;QD=30.26;ReadPosRankSum=2.202;VQSLOD=5.4773;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.24:0,84,1127	0/0:12,0:12:36.12:0,36,492	0/0:22,0:22:57.17:0,57,748	0/0:26,0:26:69.17:0,69,891	1/1:2,17:19:42.12:476,42,0	0/0:22,0:22:66.22:0,66,902	0/0:20,0:20:54.14:0,54,712	1/1:4,31:35:90.22:1002,90,0	1/1:1,23:24:66.19:749,66,0	0/0:27,0:27:69.22:0,69,929	0/0:17,0:17:48.16:0,48,656	1/1:1,14:15:42.12:475,42,0	0/0:29,0:29:81.27:0,81,1104	1/1:1,17:18:51.15:578,51,0	0/0:17,0:17:45.11:0,45,594	0/0:36,0:36:99:0,102,1374	0/0:36,0:36:99:0,99,1327	0/0:14,0:14:42.14:0,42,571	1/1:1,14:15:42.08:456,42,0	1/1:2,21:23:63.18:715,63,0	1/1:1,36:37:93.26:1055,93,0	0/0:20,0:20:60.19:0,60,802	0/0:16,0:16:48.15:0,48,641	0/0:34,0:34:84.27:0,84,1133	0/0:16,0:16:39.13:0,39,533	1/1:1,26:27:78.21:875,78,0	1/1:2,44:46:99:1473,112,0	1/1:0,5:5:12.03:136,12,0
chr10	91210884	.	TGG	T	1233.72	PASS	AB=0.919;AC=8;AF=0.333;AN=24;BaseQRankSum=-3.611;DP=351;FS=0.000;HRun=2;HaplotypeScore=28.8353;InbreedingCoeff=0.3703;MQ=27.48;MQ0=187;MQRankSum=-0.194;QD=9.21;ReadPosRankSum=-1.038;VQSLOD=0.0123;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:16:33.81:313,34,0	1/1:10,2:10:26.90:282,27,0	0/0:15,1:2:2.85:0,3,16	0/1:14,1:3:3.62:4,0,31	./.	0/0:7,0:1:3:0,3,26	./.	./.	./.	0/0:10,0:1:3:0,3,26	0/0:8,0:2:2.92:0,3,17	./.	./.	./.	0/1:16,2:10:3.22:109,0,3	./.	1/1:52,3:39:82.02:631,82,0	0/0:23,0:2:3.01:0,3,34	./.	./.	./.	./.	0/0:7,0:2:3:0,3,25	./.	./.	./.	./.	0/0:42,0:2:3.01:0,3,34
chr10	91212053	.	G	GGT	13003.40	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-15.353;DP=674;FS=8.685;HRun=0;HaplotypeScore=79.1578;InbreedingCoeff=0.9634;MQ=80.51;MQ0=2;MQRankSum=-0.342;QD=46.11;ReadPosRankSum=0.344;VQSLOD=5.6283;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,1415	0/0:3,0:3:6.02:0,6,86	0/0:16,0:16:17.09:0,17,533	0/0:18,0:18:33.10:0,33,435	1/1:2,10:13:33.11:600,33,0	0/0:15,0:15:36.12:0,36,510	0/0:56,0:56:99:0,166,2327	1/1:2,22:24:66.23:1179,66,0	1/1:0,30:31:78.09:1429,78,0	0/0:21,0:21:57.08:0,57,789	0/0:9,0:9:24.08:0,24,343	1/1:4,30:34:90.31:1641,90,0	0/0:24,1:25:11.25:0,11,828	1/1:1,24:26:66.11:1209,66,0	0/0:14,0:14:42.14:0,42,602	0/0:24,0:24:72.24:0,72,1030	0/0:35,0:35:99:0,99,1417	0/0:29,0:29:84.26:0,84,1167	1/1:2,16:20:54.13:895,54,0	1/1:1,5:6:15.05:274,15,0	1/1:8,79:88:99:3956,217,0	0/0:9,0:9:27.08:0,27,368	0/0:15,0:15:39.11:0,39,520	0/0:51,0:51:99:0,144,2021	0/0:14,0:14:42.14:0,42,600	1/1:1,14:17:8.15:776,8,0	1/1:2,14:16:42.14:769,42,0	1/1:0,6:6:15.05:275,15,0
chr10	91212402	.	TGAGAGTCCTAAGGCCCGAGTA	T	15766.78	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.825;DP=517;FS=8.872;HRun=0;HaplotypeScore=304.4846;InbreedingCoeff=0.9327;MQ=83.37;MQ0=0;MQRankSum=-14.012;QD=105.82;ReadPosRankSum=4.734;VQSLOD=3.1581;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,9618	0/0:5,0:5:15.05:0,15,1524	0/0:18,0:18:54.19:0,54,3591	0/0:21,0:21:63.22:0,63,5003	0/0:9,0:9:27.09:0,27,2491	1/1:3,17:20:48.16:2762,48,0	1/1:4,9:13:24.08:1429,24,0	0/0:18,0:18:51.17:0,51,3455	0/0:13,0:13:39.13:0,39,3443	1/1:6,14:20:39.11:2016,39,0	1/1:4,1:5:3.01:146,3,0	0/0:18,0:18:54.17:0,54,4695	1/1:5,9:14:27.06:1604,27,0	0/0:24,0:24:72.23:0,72,6469	0/0:24,0:24:72.25:0,72,6400	1/1:3,13:16:39.13:2322,39,0	0/0:40,0:40:99:0,120,10641	1/1:7,8:15:15.05:893,15,0	0/0:28,0:28:84.29:0,84,6360	0/0:9,0:9:27.09:0,27,2233	0/0:50,0:50:99:0,151,14251	1/1:5,6:11:18.06:1009,18,0	1/1:3,2:5:2.60:178,3,0	1/1:6,5:11:9.03:393,9,0	1/1:1,18:19:51.18:3013,51,0	0/0:26,0:26:75.24:0,75,6511	0/0:18,0:18:54.17:0,54,4500	0/0:10,0:10:30.10:0,30,2739
chr10	91214476	.	AAAACAAACAAAC	A	10429.96	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.624;DP=592;FS=1.333;HRun=0;HaplotypeScore=205.5399;InbreedingCoeff=0.9786;MQ=65.08;MQ0=1;MQRankSum=-12.831;QD=55.48;ReadPosRankSum=0.077;VQSLOD=4.0970;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,6063	0/0:6,0:6:18.06:0,18,1070	0/0:20,0:18:33.11:0,33,1142	0/0:30,0:24:39.60:0,40,1756	1/1:2,10:12:11.12:525,11,0	0/0:26,0:26:66.19:0,66,3615	0/0:29,0:29:78.25:0,78,4291	1/1:9,12:21:36.10:985,36,0	1/1:9,12:21:39.13:1373,39,0	0/0:26,0:26:66.23:0,66,3817	0/0:12,0:12:27.09:0,27,1444	1/1:4,9:13:27.09:956,27,0	0/0:17,0:18:42.14:0,42,2094	1/1:6,12:18:27.09:956,27,0	0/0:32,0:32:78.26:0,78,4267	0/0:22,0:22:57.20:0,57,3369	0/0:27,0:27:63.21:0,63,3384	0/0:29,0:29:81.28:0,81,4210	1/1:8,11:19:33.08:926,33,0	1/1:4,8:12:24.08:783,24,0	1/1:8,11:19:10.92:525,11,0	0/0:16,0:16:39.13:0,39,2187	0/0:18,0:18:45.14:0,45,2473	0/0:33,0:33:81.26:0,81,4504	0/0:21,0:21:57.19:0,57,3185	1/1:9,13:22:39.13:1381,39,0	1/1:11,16:27:48.16:1700,48,0	1/1:1,3:4:9.03:319,9,0
chr10	91214613	.	CT	C	8713.71	PASS	AB=0.923;AC=23;AF=0.411;AN=56;BaseQRankSum=13.944;DP=647;FS=0.303;HRun=3;HaplotypeScore=65.2205;InbreedingCoeff=0.9501;MQ=79.44;MQ0=0;MQRankSum=-4.284;QD=30.68;ReadPosRankSum=-0.040;VQSLOD=4.4258;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,1871	0/0:8,0:8:24.08:0,24,346	0/0:21,0:21:51.16:0,51,699	0/0:15,0:14:13.51:0,14,506	1/1:1,19:20:54.17:665,54,0	0/0:17,0:17:45.14:0,45,630	0/0:21,0:21:60.20:0,60,864	1/1:1,27:28:78.21:947,78,0	1/1:1,28:29:78.25:966,78,0	0/0:24,0:24:72.23:0,72,1020	0/0:21,0:21:63.20:0,63,886	1/1:0,19:19:45.14:558,45,0	0/0:16,0:16:45.15:0,45,646	1/1:2,23:25:66.21:818,66,0	0/0:30,0:30:90.30:0,90,1294	0/1:22,2:24:2.09:2,0,862	0/0:29,0:29:84.27:0,84,1191	0/0:35,0:35:99:0,102,1429	1/1:3,16:19:45.14:556,45,0	1/1:1,18:19:54.17:669,54,0	1/1:1,40:41:99:1413,114,0	0/0:21,0:21:63.17:0,63,884	0/0:17,0:17:48.16:0,48,691	0/0:25,0:25:69.23:0,69,994	0/0:17,0:17:48.16:0,48,691	1/1:1,27:28:81.25:1003,81,0	1/1:0,25:25:69.22:855,69,0	1/1:0,7:7:21.07:260,21,0
chr10	91215722	.	TG	T	6828.13	PASS	AB=0.900;AC=23;AF=0.411;AN=56;BaseQRankSum=13.704;DP=552;FS=2.946;HRun=1;HaplotypeScore=50.8151;InbreedingCoeff=0.9262;MQ=72.23;MQ0=0;MQRankSum=-1.118;QD=35.56;ReadPosRankSum=3.487;VQSLOD=4.9359;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1514	0/1:8,1:9:14.85:15,0,348	0/0:22,0:21:56.18:0,56,808	0/0:11,0:10:15.75:0,16,322	0/0:27,0:27:81.26:0,81,1243	1/1:0,20:20:51.17:713,51,0	1/1:0,15:15:36.12:503,36,0	0/0:31,0:31:93.29:0,93,1393	0/0:21,0:21:63.20:0,63,958	1/1:0,17:17:48.15:654,48,0	1/1:0,17:17:51.13:691,51,0	0/0:15,0:15:45.15:0,45,702	1/1:0,16:16:45.15:625,45,0	0/0:14,0:14:42.11:0,42,611	0/0:28,0:28:84.27:0,84,1285	1/1:0,28:28:72.24:1007,72,0	0/0:26,0:26:78.22:0,78,1169	1/1:0,17:17:45.15:629,45,0	0/0:19,0:19:57.15:0,57,808	0/0:28,0:28:84.27:0,84,1290	0/0:18,0:18:54.18:0,54,843	1/1:0,9:9:24.04:314,24,0	1/1:0,17:17:48.16:670,48,0	1/1:0,13:13:30.10:419,30,0	1/1:0,14:14:42.14:587,42,0	0/0:23,0:23:69.21:0,69,1016	0/0:25,0:25:72.24:0,72,1121	0/0:19,0:19:57.19:0,57,891
chr10	91216124	.	GGCGCGCGC	G	4482.15	PASS	AB=0.986;AC=36;AF=0.667;AN=54;BaseQRankSum=5.001;DP=498;FS=5.288;HRun=0;HaplotypeScore=174.4440;InbreedingCoeff=0.2461;MQ=61.62;MQ0=0;MQRankSum=-5.128;QD=11.32;ReadPosRankSum=-2.868;VQSLOD=3.2659;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:69.24:0,69,2315	0/0:7,0:7:9.01:0,9,179	./.	0/1:7,0:8:27.33:34,0,27	1/1:7,0:16:4.99:25,5,0	1/1:13,3:17:3.52:202,4,0	1/1:17,17:35:24.08:577,24,0	0/1:20,0:19:1.28:56,0,1	1/1:18,0:18:10.63:177,11,0	1/1:10,5:16:12.99:643,13,0	0/0:5,2:7:0.07:0,0,1	0/1:31,0:31:13.51:336,0,14	1/1:8,3:11:3.01:73,3,0	0/1:16,0:16:3.98:204,0,4	0/0:14,0:14:27.08:0,27,877	1/1:11,6:17:17.92:286,18,0	0/0:36,0:36:78.24:0,78,2593	1/1:12,1:13:24.04:463,24,0	1/1:24,0:24:35.51:334,36,0	1/1:14,0:14:9.03:175,9,0	0/1:39,0:39:0.14:0,0,33	1/1:13,7:19:3:25,3,0	1/1:6,1:7:3.01:79,3,0	1/1:13,7:21:6:68,6,0	1/1:7,4:10:12.04:287,12,0	0/1:23,0:23:27.94:245,0,28	0/1:10,0:10:13.96:155,0,14	0/1:9,0:9:15.27:40,0,15
chr10	91216135	.	GCGCGCGCGCACACACACACACA	G	7371.63	PASS	AB=0.983;AC=36;AF=0.667;AN=54;BaseQRankSum=3.863;DP=433;FS=7.358;HRun=0;HaplotypeScore=231.5714;InbreedingCoeff=0.2208;MQ=54.23;MQ0=4;MQRankSum=-1.089;QD=22.20;ReadPosRankSum=0.777;VQSLOD=2.4539;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:96.33:0,96,5773	0/0:4,0:4:12.02:0,12,347	./.	0/1:4,0:4:24.31:34,0,24	1/1:12,0:12:4.99:25,5,0	0/1:14,0:14:26.14:26,0,826	0/1:33,0:32:40.61:292,0,41	1/1:10,0:8:13.81:150,14,0	1/1:1,12:14:14.07:587,14,0	0/1:17,0:17:99:317,0,482	0/0:8,0:8:6.45:0,6,73	1/1:21,5:26:61.06:1334,61,0	0/1:8,0:8:5.73:48,0,6	1/1:17,0:18:18.01:580,18,0	0/0:13,0:12:30.09:0,30,1756	0/1:11,1:12:99:263,0,312	0/0:37,0:37:99:0,103,5975	0/1:14,0:15:99:152,0,841	1/1:2,16:18:50.62:977,51,0	1/1:0,8:9:9.03:530,9,0	1/1:4,26:31:3.81:11,4,0	1/1:12,0:12:3:25,3,0	0/1:6,0:6:23.74:49,0,24	1/1:21,0:21:5.81:67,6,0	1/1:11,0:10:12.04:225,12,0	1/1:1,18:18:37.66:1073,38,0	1/1:2,10:12:8.97:539,9,0	1/1:9,0:9:5.93:67,6,0
chr10	91216139	.	GCGCGCACACACACACACACACA	G	5838.53	PASS	AB=1.000;AC=32;AF=0.640;AN=50;BaseQRankSum=6.027;DP=410;FS=4.082;HRun=0;HaplotypeScore=220.7540;InbreedingCoeff=0.2672;MQ=52.17;MQ0=7;MQRankSum=-3.534;QD=20.34;ReadPosRankSum=0.607;VQSLOD=3.7865;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:92.49:0,92,5294	0/0:3,0:3:6.01:0,6,282	./.	0/1:3,0:3:0:0,0,0	./.	0/1:13,0:13:27.82:28,0,890	0/1:33,0:31:69.67:70,0,117	1/1:9,0:5:11.78:93,12,0	1/1:14,0:14:12.04:572,12,0	0/1:15,0:15:75.08:75,0,577	0/0:8,0:8:6.45:0,6,73	1/1:21,0:21:47.44:1165,47,0	1/1:5,0:5:5.94:42,6,0	1/1:3,11:14:9.03:519,9,0	0/0:11,0:10:24.07:0,24,1516	0/1:13,0:13:99:180,0,360	0/0:38,0:38:99:0,101,5973	0/1:14,0:14:13.60:14,0,1038	1/1:18,0:18:47.83:873,48,0	1/1:9,0:9:9.03:513,9,0	1/1:30,0:30:2.29:13,2,0	./.	0/1:7,0:7:5.58:6,0,51	1/1:19,0:19:2.82:40,3,0	1/1:12,0:11:8.66:47,9,0	1/1:19,0:18:37.63:1030,38,0	1/1:12,0:12:9.03:541,9,0	0/1:7,0:7:4.05:18,0,4
chr10	91216143	.	GCACACACACACACA	G	2480.90	PASS	AB=0.958;AC=16;AF=0.320;AN=50;BaseQRankSum=5.820;DP=422;FS=1.477;HRun=0;HaplotypeScore=195.2471;InbreedingCoeff=0.2788;MQ=48.00;MQ0=9;MQRankSum=-3.413;QD=16.01;ReadPosRankSum=1.458;VQSLOD=2.3843;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:87.06:0,87,3616	0/0:4,0:4:9.03:0,9,502	./.	./.	./.	0/0:14,0:14:25.23:0,25,723	0/0:35,0:33:21.20:0,21,234	0/1:8,4:7:11.09:105,0,11	1/1:13,0:13:8.46:309,8,0	0/0:17,0:17:46.33:0,46,739	0/0:8,0:8:6.96:0,7,74	0/1:20,0:20:92.49:448,0,92	0/0:5,0:5:5.65:0,6,31	1/1:14,0:14:9.03:298,9,0	0/0:11,0:10:24.07:0,24,928	0/1:13,0:13:85.39:85,0,296	0/0:36,0:37:99:0,100,4253	0/0:19,0:19:49.90:0,50,1262	0/1:17,0:17:40.03:326,0,40	1/1:9,0:9:9.03:306,9,0	0/0:29,0:29:3.19:0,3,21	0/0:18,0:17:6.02:0,6,71	0/0:9,0:9:14.94:0,15,130	1/1:19,0:19:1.05:4,1,0	0/0:13,0:12:11.77:0,12,81	0/1:20,0:18:40.98:390,0,41	1/1:11,0:11:8.86:304,9,0	0/1:7,0:7:17.97:64,0,18
chr10	91216155	.	ACACACACG	A	1486.20	PASS	AB=1.000;AC=18;AF=0.346;AN=52;BaseQRankSum=5.455;DP=446;FS=2.927;HRun=0;HaplotypeScore=171.7162;InbreedingCoeff=0.6026;MQ=43.55;MQ0=13;MQRankSum=-3.416;QD=11.52;ReadPosRankSum=2.341;VQSLOD=2.9184;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:36.68:0,37,2049	0/0:4,0:4:9.03:0,9,307	./.	0/0:11,0:1:2.84:0,3,14	./.	0/0:15,0:15:29.87:0,30,483	0/0:36,0:34:14.29:0,14,110	0/1:10,0:5:27.10:33,0,27	1/1:13,0:13:11.97:170,12,0	0/0:16,0:16:15.92:0,16,369	0/0:14,0:14:12.50:0,13,150	1/1:16,0:16:29.37:311,29,0	0/0:5,0:5:3.01:0,3,48	1/1:13,0:13:9.03:158,9,0	0/0:16,0:15:29.99:0,30,747	0/1:12,0:12:38.18:38,0,153	0/0:43,0:43:96.49:0,96,2591	0/0:20,0:20:15.09:0,15,779	1/1:18,0:17:23.80:251,24,0	1/1:9,0:9:9.03:151,9,0	0/0:31,0:30:2.04:0,2,6	0/0:18,0:17:6.02:0,6,71	0/0:10,0:10:11.94:0,12,106	0/0:18,0:18:3.74:0,4,14	0/0:13,0:12:2.94:0,3,18	1/1:20,0:18:27.44:319,27,0	1/1:11,0:11:9.03:157,9,0	1/1:1,6:7:3.01:77,3,0
chr10	91216161	.	A	ACACGCGCG	2638.78	PASS	AB=0.935;AC=23;AF=0.426;AN=54;BaseQRankSum=2.536;DP=528;FS=6.381;HRun=0;HaplotypeScore=205.0790;InbreedingCoeff=0.1558;MQ=43.09;MQ0=13;MQRankSum=-5.369;QD=7.85;ReadPosRankSum=-4.187;VQSLOD=1.2256;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:93.18:0,93,2380	0/0:6,0:6:11.91:0,12,264	0/0:5,0:3:9.03:0,9,182	0/0:13,0:2:3.01:0,3,71	0/0:9,0:9:3.48:0,3,43	1/1:12,0:15:23.67:376,24,0	1/1:26,2:46:17.86:276,18,0	0/1:17,0:11:4.34:58,0,4	0/1:16,0:16:27.71:28,0,141	1/1:14,0:17:28.32:567,28,0	1/1:5,2:15:2.55:52,3,0	0/0:19,0:19:5.67:0,6,242	1/1:6,0:9:3.01:54,3,0	0/0:17,0:17:9.03:0,9,164	0/0:16,0:15:30.10:0,30,729	0/1:16,0:16:38.69:127,0,39	0/0:43,0:43:99:0,102,2662	0/1:16,0:21:61.36:990,0,61	0/1:20,0:19:46.98:47,0,132	0/1:12,0:12:9.96:10,0,161	0/1:38,0:38:20.48:34,0,20	0/1:15,0:17:0.01:0,0,0	0/1:6,0:13:0:0,0,0	1/1:10,0:25:5.74:128,6,0	./.	0/1:25,0:23:51.45:51,0,264	0/0:11,0:11:10.28:0,10,163	0/1:10,0:10:4.18:4,0,50
chr10	91216383	.	A	ATGTG	20256.13	PASS	AB=0.684;AC=42;AF=0.750;AN=56;BaseQRankSum=-10.996;DP=697;FS=3.562;HRun=0;HaplotypeScore=118.6523;InbreedingCoeff=0.6467;MQ=62.04;MQ0=8;MQRankSum=-1.365;QD=37.24;ReadPosRankSum=-0.912;VQSLOD=4.5590;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:43:76.13:0,76,1457	0/0:10,0:10:21.06:0,21,327	0/1:28,0:17:9.15:9,0,75	0/0:31,0:17:7.13:0,7,233	1/1:2,12:14:30.57:687,31,0	1/1:4,10:15:32.85:752,33,0	1/1:11,27:42:24.77:1598,25,0	1/1:11,15:29:9.71:895,10,0	0/1:4,8:15:23.13:503,0,23	1/1:11,15:28:59.53:1166,60,0	1/1:5,12:18:30.10:684,30,0	1/1:6,11:17:33.11:774,33,0	1/1:8,4:12:17.64:438,18,0	1/1:4,19:24:41.85:973,42,0	0/0:34,0:35:84.26:0,84,1331	0/1:7,21:29:0.95:1423,0,1	0/0:31,0:34:82.76:0,83,1225	1/1:12,15:29:30.57:741,31,0	1/1:6,15:21:44.99:825,45,0	1/1:3,14:17:39.13:909,39,0	1/1:13,22:37:54.18:1294,54,0	1/1:4,11:17:29.73:608,30,0	1/1:7,10:18:29.70:578,30,0	1/1:10,25:38:66.23:1627,66,0	1/1:7,16:26:46.18:953,46,0	1/1:10,23:36:86.64:1652,87,0	1/1:6,13:20:38.87:886,39,0	0/1:4,9:13:8.85:280,0,9
chr10	91217908	.	A	AT	4889.63	PASS	AB=0.606;AC=20;AF=0.357;AN=56;BaseQRankSum=-6.705;DP=587;FS=0.348;HRun=10;HaplotypeScore=60.9293;InbreedingCoeff=0.8680;MQ=70.13;MQ0=0;MQRankSum=-2.430;QD=20.29;ReadPosRankSum=-3.235;VQSLOD=4.4053;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,111,910	0/0:7,0:7:14.98:0,15,123	0/0:13,0:14:22.98:0,23,176	0/0:9,0:7:14.95:0,15,118	1/1:6,24:30:35.50:580,36,0	0/0:22,0:22:50.92:0,51,419	0/0:20,0:20:50.89:0,51,412	1/1:5,35:41:67.04:888,67,0	1/1:2,13:15:11.45:327,11,0	0/0:32,0:32:83.88:0,84,688	0/0:24,0:24:65.91:0,66,542	0/1:3,6:9:24.96:168,0,25	0/0:15,0:15:41.94:0,42,345	1/1:7,9:16:30.06:312,30,0	0/0:25,0:25:55.73:0,56,449	0/0:29,0:29:80.88:0,81,662	0/0:23,0:24:61.93:0,62,498	0/0:16,0:16:40.38:0,40,336	1/1:2,15:18:23.44:443,23,0	1/1:15,18:33:48.70:688,49,0	1/1:4,8:13:26.73:252,27,0	0/0:11,0:11:32.96:0,33,271	0/0:15,0:15:38.95:0,39,320	0/0:20,0:20:56.93:0,57,468	0/0:20,0:20:50.93:0,51,419	1/1:6,21:27:51.10:534,51,0	0/1:7,12:19:0.08:200,0,0	1/1:4,16:20:11.31:498,11,0
chr10	91218024	.	CA	C	7621.22	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=18.845;DP=589;FS=10.670;HRun=2;HaplotypeScore=108.6677;InbreedingCoeff=0.9875;MQ=54.94;MQ0=5;MQRankSum=-4.855;QD=33.28;ReadPosRankSum=2.411;VQSLOD=3.8098;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1488	0/0:11,0:11:33.11:0,33,494	0/0:10,0:7:21.07:0,21,300	0/0:21,0:15:7.66:0,8,489	1/1:1,15:16:39:506,39,0	0/0:18,0:18:54.17:0,54,790	0/0:31,0:31:93.30:0,93,1368	1/1:0,23:23:66.21:856,66,0	1/1:0,14:14:42.14:545,42,0	0/0:21,0:21:60.20:0,60,895	0/0:12,0:11:21.07:0,21,310	1/1:1,13:14:36.12:467,36,0	0/0:22,0:22:66.20:0,66,962	1/1:0,15:15:42.14:545,42,0	0/0:25,0:25:69.21:0,69,995	0/0:26,0:26:72.24:0,72,1079	0/0:39,0:39:99:0,114,1707	0/0:23,0:23:69.23:0,69,1034	1/1:3,18:19:54.18:698,54,0	1/1:0,23:22:60.20:778,60,0	1/1:1,26:27:56.35:738,56,0	0/0:14,0:14:36.10:0,36,502	0/0:12,0:11:24.08:0,24,358	0/0:25,0:25:72.24:0,72,1079	0/0:16,0:16:48.16:0,48,710	1/1:2,24:25:44.24:816,44,0	1/1:1,32:32:93.30:1205,93,0	1/1:3,14:17:36.12:467,36,0
chr10	91218298	.	G	GC	5619.19	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=13.140;DP=495;FS=2.839;HRun=0;HaplotypeScore=64.7587;InbreedingCoeff=0.9559;MQ=67.47;MQ0=20;MQRankSum=-5.249;QD=33.45;ReadPosRankSum=-0.756;VQSLOD=4.0949;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.30:0,96,1322	0/0:8,0:8:24.07:0,24,312	0/0:36,0:14:38.84:0,39,443	0/0:36,0:20:56.17:0,56,635	1/1:1,13:13:24.08:357,24,0	0/0:24,0:24:72.21:0,72,969	0/0:17,0:16:45.14:0,45,614	1/1:3,22:25:60.03:816,60,0	1/1:0,14:13:27.09:417,27,0	0/0:14,0:14:42.14:0,42,574	0/0:18,0:18:51.17:0,51,711	1/1:0,9:9:24.08:373,24,0	0/0:5,0:5:15.05:0,15,210	1/1:2,8:10:15.05:229,15,0	0/0:15,0:15:45.14:0,45,614	0/0:8,0:8:24.07:0,24,320	0/0:35,0:35:99:0,102,1350	0/0:20,0:20:60.20:0,60,838	1/1:0,18:15:45.10:663,45,0	1/1:3,18:21:47.52:642,48,0	1/1:1,12:11:30.10:449,30,0	0/0:10,0:10:27.09:0,27,378	0/0:11,0:10:30.09:0,30,403	0/0:26,0:25:69.21:0,69,942	0/0:10,0:9:30.09:0,30,404	1/1:3,12:14:0.12:510,0,0	1/1:1,19:19:54.18:837,54,0	1/1:0,9:9:21.07:324,21,0
chr10	91218384	.	CA	C	815.08	PASS	AB=0.794;AC=19;AF=0.339;AN=56;BaseQRankSum=-4.920;DP=442;FS=12.855;HRun=16;HaplotypeScore=59.9434;InbreedingCoeff=0.4332;MQ=51.23;MQ0=17;MQRankSum=-0.294;QD=4.94;ReadPosRankSum=-4.179;VQSLOD=-0.2580;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:48.03:0,48,469	0/1:9,1:11:4.62:5,0,62	0/0:23,1:3:0:0,0,0	0/0:15,0:2:2.96:0,3,19	0/1:7,7:13:2.01:97,0,2	0/0:22,0:21:39.77:0,40,152	0/0:15,0:12:10.94:0,11,41	1/1:3,8:12:17.60:107,18,0	0/1:6,1:6:16.27:27,0,16	0/0:16,0:16:21.65:0,22,84	0/0:11,0:9:4.99:0,5,19	1/1:6,6:9:14.67:88,15,0	0/0:12,0:11:15.93:0,16,67	1/1:8,4:12:10.75:59,11,0	0/0:12,2:14:8.96:0,9,183	0/0:7,0:6:7.69:0,8,28	0/0:34,1:35:59.63:0,60,580	0/0:30,1:31:35.17:0,35,132	0/1:12,5:17:32.41:154,0,32	0/1:12,3:13:14.89:41,0,15	1/1:6,6:10:2.40:71,2,0	0/0:3,0:3:5.17:0,5,20	0/0:10,0:9:10.47:0,10,39	0/0:13,0:12:20.93:0,21,80	0/0:14,1:15:9.35:0,9,70	1/1:10,7:19:3.50:145,4,0	1/1:9,10:18:1.21:118,1,0	1/1:5,6:9:9.58:75,10,0
chr10	91218397	.	A	AT	2543.60	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=5.478;DP=485;FS=3.965;HRun=0;HaplotypeScore=62.8922;InbreedingCoeff=0.9132;MQ=60.40;MQ0=12;MQRankSum=3.397;QD=16.52;ReadPosRankSum=6.736;VQSLOD=5.0877;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:77.62:0,78,914	0/0:15,0:15:35.92:0,36,339	0/0:37,0:9:1.25:0,1,52	0/0:23,0:5:1.99:0,2,28	0/0:17,0:16:45.67:0,46,362	1/1:5,15:19:52.08:530,52,0	1/1:1,11:10:14.25:139,14,0	0/0:16,0:16:38.72:0,39,294	0/0:8,0:8:23.97:0,24,213	1/1:2,15:17:47.73:445,48,0	1/1:1,8:9:11.88:99,12,0	0/0:18,0:15:32.90:0,33,272	1/1:2,10:11:22.29:223,22,0	0/0:11,0:11:26.85:0,27,209	0/0:13,0:13:36.06:0,36,433	1/1:1,8:8:9.02:99,9,0	0/0:28,0:28:82.32:0,82,972	1/1:4,29:33:40.21:433,40,0	0/0:23,0:22:59.76:0,60,514	0/0:16,0:14:35.79:0,36,298	0/0:14,0:13:32.73:0,33,242	1/1:1,5:6:11.86:101,12,0	1/1:2,6:7:11.96:130,12,0	1/1:0,11:11:24.06:261,24,0	1/1:3,13:16:29.16:300,29,0	0/0:26,1:27:46.48:0,46,536	0/0:20,0:20:50.70:0,51,399	0/0:12,0:9:24.24:0,24,167
chr10	91219953	.	GAA	G	12721.51	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=8.082;DP=728;FS=3.519;HRun=12;HaplotypeScore=94.9683;InbreedingCoeff=0.9938;MQ=72.88;MQ0=2;MQRankSum=-1.679;QD=22.05;ReadPosRankSum=2.026;VQSLOD=4.7258;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:40:99:0,102,1418	0/0:9,0:9:21.07:0,21,305	0/0:19,0:13:14.98:0,15,161	0/0:18,0:16:17.51:0,18,187	1/1:3,20:23:35.88:555,36,0	1/1:3,20:23:51.11:519,51,0	1/1:4,12:18:35.76:339,36,0	1/1:7,27:35:77.38:784,77,0	1/1:6,20:26:51.10:519,51,0	1/1:8,26:35:80.89:797,81,0	1/1:2,14:16:42.09:427,42,0	1/1:3,28:32:62.86:693,63,0	1/1:6,15:21:42.08:426,42,0	1/1:5,12:17:30.01:294,30,0	0/0:32,0:32:78.24:0,78,1099	1/1:3,26:29:72.14:732,72,0	0/0:29,0:31:80.75:0,81,1155	1/1:4,30:33:75.15:763,75,0	1/1:4,19:24:50.79:556,51,0	1/1:2,15:17:39.04:397,39,0	1/1:4,30:35:68.85:683,69,0	1/1:6,16:22:34.76:364,35,0	1/1:3,15:18:38.74:396,39,0	1/1:5,25:30:63.10:641,63,0	1/1:5,20:25:51.07:519,51,0	1/1:5,31:37:95.91:944,96,0	1/1:6,34:40:84.15:854,84,0	1/1:2,18:20:51.10:519,51,0
chr10	91223210	.	TACAC	T	581.99	PASS	AB=0.806;AC=6;AF=0.115;AN=52;BaseQRankSum=0.833;DP=560;FS=12.015;HRun=0;HaplotypeScore=103.1834;InbreedingCoeff=0.4838;MQ=70.23;MQ0=8;MQRankSum=1.058;QD=6.77;ReadPosRankSum=2.176;VQSLOD=1.7037;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,3:28:15.09:168,0,15	0/1:7,5:12:3.47:76,0,3	./.	./.	0/0:15,0:18:8.50:0,8,70	0/0:21,0:23:26.69:0,27,512	0/0:26,0:25:24.08:0,24,486	0/0:24,0:22:3.01:0,3,39	0/0:11,0:11:6.49:0,6,136	0/0:30,0:29:39.13:0,39,761	0/0:11,0:14:7.68:0,8,81	0/0:15,0:15:18.06:0,18,384	0/0:6,0:13:5.99:0,6,73	0/0:7,0:8:11.78:0,12,212	1/1:11,8:19:9.03:139,9,0	0/0:11,0:24:21.07:0,21,383	1/1:15,11:25:21.05:325,21,0	0/0:15,0:18:20.78:0,21,351	0/0:13,0:13:12.03:0,12,233	0/0:13,0:14:18.04:0,18,353	0/0:28,0:27:33.09:0,33,562	0/0:18,0:17:8.82:0,9,165	0/0:12,0:13:11.78:0,12,212	0/0:38,0:40:47.63:0,48,904	0/0:10,0:15:3.01:0,3,52	0/0:16,0:16:26.79:0,27,401	0/0:19,0:19:23.82:0,24,493	0/0:14,0:14:33.10:0,33,694
chr10	91223339	.	CT	C	4439.77	PASS	AB=0.740;AC=43;AF=0.768;AN=56;BaseQRankSum=5.044;DP=572;FS=0.978;HRun=13;HaplotypeScore=75.3009;InbreedingCoeff=0.5739;MQ=67.97;MQ0=4;MQRankSum=-0.538;QD=9.63;ReadPosRankSum=2.635;VQSLOD=4.4383;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:37:61.62:0,62,618	0/0:10,0:13:26.68:0,27,223	0/1:15,2:15:14.81:15,0,163	0/0:12,1:13:1.29:0,1,136	1/1:7,18:25:35.65:262,36,0	1/1:6,15:22:7.69:201,8,0	1/1:6,13:18:15.39:205,15,0	1/1:9,14:24:14.55:257,15,0	1/1:6,16:23:37.75:268,38,0	1/1:22,12:34:34.70:246,35,0	0/1:7,5:13:4.57:73,0,5	1/1:9,6:14:5.84:43,6,0	1/1:4,12:17:28.87:203,29,0	1/1:5,5:12:21.70:134,22,0	0/0:19,1:20:26.16:0,26,386	1/1:5,14:18:3.63:190,4,0	0/0:22,2:26:27.41:0,27,469	1/1:5,9:14:2.65:174,3,0	1/1:14,14:30:42.70:296,43,0	0/1:11,12:25:23.81:135,0,24	1/1:3,6:9:17.88:131,18,0	1/1:5,6:12:13.93:92,14,0	1/1:4,22:27:46.68:331,47,0	1/1:3,22:26:49.50:346,50,0	1/1:3,15:18:38.71:284,39,0	1/1:5,12:17:32.66:235,33,0	1/1:11,13:23:22.14:157,22,0	1/1:7,7:14:9.23:161,9,0
chr10	91224425	.	CA	C	2036.11	PASS	AB=0.776;AC=23;AF=0.411;AN=56;BaseQRankSum=5.381;DP=545;FS=2.926;HRun=14;HaplotypeScore=65.2784;InbreedingCoeff=0.4379;MQ=55.01;MQ0=20;MQRankSum=3.095;QD=8.41;ReadPosRankSum=3.549;VQSLOD=3.0654;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,1:46:84.19:0,84,875	0/1:10,2:11:2.57:3,0,117	0/1:8,0:3:10.01:10,0,17	0/1:3,0:2:7.35:11,0,7	0/0:17,1:18:6.33:0,6,178	1/1:5,14:21:45.69:299,46,0	1/1:1,10:13:27.88:176,28,0	0/0:27,0:25:46.73:0,47,402	0/0:20,0:19:34.25:0,34,302	0/1:6,18:24:6.56:233,0,7	1/1:4,10:14:3.93:163,4,0	0/0:13,1:13:6.42:0,6,194	1/1:1,8:9:20.58:144,21,0	0/1:15,1:15:13.68:14,0,155	0/0:18,1:19:8.59:0,9,282	1/1:6,11:19:13.13:213,13,0	0/0:26,2:28:24.26:0,24,347	1/1:9,20:28:58.54:396,59,0	0/0:18,0:19:18.43:0,18,303	0/0:17,1:17:9.44:0,9,226	0/0:23,0:24:38.73:0,39,320	1/1:9,7:14:20.79:144,21,0	1/1:3,14:17:4.47:177,4,0	0/1:10,7:18:30.66:90,0,31	0/1:5,11:17:16.77:156,0,17	0/0:30,2:32:6.85:0,7,341	0/0:16,1:18:14.22:0,14,250	0/0:13,1:13:9.16:0,9,203
chr10	91225109	.	AAAG	A	2753.56	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=0.620;DP=401;FS=0.447;HRun=0;HaplotypeScore=74.2071;InbreedingCoeff=0.8354;MQ=59.96;MQ0=28;MQRankSum=-1.924;QD=15.65;ReadPosRankSum=-4.098;VQSLOD=2.4364;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:26:61.99:0,62,939	0/0:5,0:5:12.04:0,12,234	0/1:22,0:14:37.81:38,0,78	0/1:14,0:6:2.75:26,0,3	1/1:13,8:19:50.21:400,50,0	0/0:11,0:9:24.67:0,25,196	0/0:14,0:13:32.34:0,32,274	1/1:15,2:15:32.94:305,33,0	1/1:6,2:8:11.93:104,12,0	0/0:20,0:16:31.63:0,32,375	0/0:15,0:14:19.07:0,19,214	1/1:2,5:5:9.03:128,9,0	0/0:11,0:11:19.68:0,20,143	1/1:6,2:8:14.54:129,15,0	0/0:13,0:9:23.89:0,24,313	0/0:15,0:13:36.89:0,37,357	0/0:29,0:29:68.74:0,69,1012	0/0:18,0:16:39.04:0,39,434	1/1:5,6:11:33.04:393,33,0	1/1:8,6:14:35.86:345,36,0	1/1:7,1:8:20.29:149,20,0	0/0:5,0:5:11.99:0,12,105	0/0:12,0:10:26.06:0,26,277	0/0:10,0:9:14.05:0,14,127	0/0:17,0:16:45.07:0,45,367	1/1:20,7:24:59.76:610,60,0	1/1:11,4:12:30.33:276,30,0	1/1:3,1:2:6.01:68,6,0
chr10	91225110	.	AAG	A	2244.09	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=3.174;DP=400;FS=4.783;HRun=0;HaplotypeScore=70.3200;InbreedingCoeff=0.7804;MQ=60.09;MQ0=28;MQRankSum=-2.584;QD=12.68;ReadPosRankSum=-3.261;VQSLOD=2.5380;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:26:61.60:0,62,727	0/0:5,0:5:12:0,12,186	0/1:23,0:15:19.52:20,0,69	0/1:15,0:6:2.73:20,0,3	1/1:21,0:19:50.59:387,51,0	0/0:12,0:10:6.91:0,7,103	0/0:14,0:13:21.07:0,21,162	1/1:16,1:15:32.91:267,33,0	1/1:8,0:8:11.91:85,12,0	0/0:20,0:16:35.32:0,35,273	0/0:15,0:14:3.91:0,4,148	1/1:6,0:5:8.97:70,9,0	0/0:10,0:10:3.42:0,3,55	1/1:8,0:8:14.50:95,15,0	0/0:13,0:9:20.72:0,21,217	0/0:15,0:13:26.03:0,26,196	0/0:30,0:29:68.53:0,69,770	0/0:17,0:15:37.24:0,37,275	1/1:10,1:11:32.90:265,33,0	1/1:15,0:15:39.27:297,39,0	1/1:8,0:8:20.41:150,20,0	0/0:4,0:4:10.56:0,11,50	0/0:12,0:10:25.71:0,26,209	0/0:10,0:9:13.37:0,13,83	0/0:17,0:16:25.80:0,26,228	1/1:25,1:23:59.86:501,60,0	1/1:13,2:12:32.81:249,33,0	1/1:4,0:2:5.99:49,6,0
chr10	91225111	.	AG	A	2144.14	PASS	AB=0.936;AC=29;AF=0.518;AN=56;BaseQRankSum=4.633;DP=392;FS=14.397;HRun=1;HaplotypeScore=63.9086;InbreedingCoeff=0.4331;MQ=60.68;MQ0=26;MQRankSum=-6.379;QD=9.09;ReadPosRankSum=-0.100;VQSLOD=-0.3596;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:26:48.16:0,48,524	0/0:4,0:4:12.04:0,12,140	0/1:22,0:15:30.25:30,0,63	0/1:14,1:6:0.04:0,0,8	1/1:19,2:19:50.29:346,50,0	0/1:11,1:10:31.67:41,0,32	0/0:14,0:13:9.24:0,9,93	1/1:13,0:12:32.81:255,33,0	1/1:8,0:8:11.84:79,12,0	0/0:19,0:16:15.51:0,16,191	0/1:13,1:13:11.75:12,0,117	1/1:6,0:5:8.83:53,9,0	0/1:8,2:10:38.94:52,0,39	1/1:8,0:8:14.36:82,14,0	0/1:11,1:9:11.92:12,0,118	0/1:16,0:14:12.51:13,0,74	0/0:30,0:29:59.37:0,59,506	0/0:17,0:15:4.82:0,5,112	1/1:12,0:12:35.49:243,35,0	1/1:14,0:14:38.55:272,39,0	1/1:7,0:7:20.41:150,20,0	0/0:4,0:4:1.79:0,2,17	0/0:12,0:10:14.81:0,15,124	0/0:10,0:9:3.02:0,3,46	0/0:17,0:16:23.41:0,23,162	1/1:25,0:22:59.35:432,59,0	1/1:15,0:12:32.57:226,33,0	1/1:4,0:2:5.92:43,6,0
chr10	91225116	.	CA	C	3128.23	PASS	AB=0.816;AC=42;AF=0.750;AN=56;BaseQRankSum=3.776;DP=403;FS=20.026;HRun=12;HaplotypeScore=61.7975;InbreedingCoeff=0.6446;MQ=65.35;MQ0=27;MQRankSum=-3.809;QD=10.60;ReadPosRankSum=-1.823;VQSLOD=0.7638;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:9.81:0,10,480	0/0:4,0:4:12.02:0,12,122	0/1:27,1:17:5.18:5,0,155	0/0:21,0:9:6.92:0,7,62	1/1:7,13:19:4.68:198,5,0	1/1:5,7:10:20.91:162,21,0	1/1:5,8:13:22.95:168,23,0	1/1:4,12:14:32.80:249,33,0	1/1:3,5:8:2.97:23,3,0	1/1:6,13:17:37.88:284,38,0	1/1:4,9:12:20.90:162,21,0	1/1:4,1:5:2.97:23,3,0	1/1:3,8:11:14.93:116,15,0	1/1:2,5:7:10.50:68,10,0	0/0:11,0:9:21.04:0,21,212	1/1:7,9:14:26.87:209,27,0	0/0:26,1:26:36.73:0,37,539	1/1:6,10:14:26.83:205,27,0	1/1:3,10:13:1.13:174,1,0	1/1:2,14:16:32.82:251,33,0	0/1:4,4:8:6.99:95,0,7	1/1:0,4:4:11.95:93,12,0	1/1:4,8:10:20.90:162,21,0	1/1:6,5:10:8.95:70,9,0	1/1:4,11:14:5.42:225,5,0	1/1:10,15:22:43.53:321,44,0	0/0:15,0:12:24.03:0,24,233	1/1:2,2:2:5.98:46,6,0
chr10	91225315	.	T	TA	9329.05	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-6.696;DP=410;FS=1.969;HRun=7;HaplotypeScore=37.7773;InbreedingCoeff=0.9067;MQ=58.75;MQ0=8;MQRankSum=-3.501;QD=27.68;ReadPosRankSum=1.571;VQSLOD=5.1527;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:59.57:0,60,555	0/0:6,0:6:18.02:0,18,170	0/0:9,0:3:6:0,6,55	0/0:4,0:3:6.01:0,6,56	1/1:2,15:17:42.13:505,42,0	1/1:2,18:20:45.14:544,45,0	1/1:0,6:6:11.99:128,12,0	1/1:8,27:32:72.17:840,72,0	1/1:2,14:16:36.11:431,36,0	1/1:2,19:20:57.17:687,57,0	1/1:2,16:18:39.08:455,39,0	1/1:1,7:8:21.06:253,21,0	1/1:2,11:13:30.09:362,30,0	1/1:0,9:9:24.07:290,24,0	0/0:14,0:14:33.05:0,33,318	1/1:1,13:14:33.10:399,33,0	0/0:15,0:15:33.05:0,33,319	1/1:1,18:19:45.13:532,45,0	1/1:1,21:21:57.16:668,57,0	1/1:1,17:18:45.07:519,45,0	1/1:0,9:9:18.02:202,18,0	1/1:0,5:5:6.02:72,6,0	1/1:1,6:7:8.81:109,9,0	1/1:1,6:7:12.04:145,12,0	1/1:1,14:15:39.12:471,39,0	1/1:2,19:21:51.13:600,51,0	1/1:3,23:24:60.18:718,60,0	1/1:0,11:11:33.10:399,33,0
chr10	91228087	.	CT	C	3014.31	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-5.700;DP=502;FS=0.409;HRun=11;HaplotypeScore=64.3231;InbreedingCoeff=0.9328;MQ=60.13;MQ0=9;MQRankSum=3.074;QD=16.29;ReadPosRankSum=5.173;VQSLOD=4.2724;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:63.01:0,63,644	0/0:10,0:10:24.05:0,24,249	0/0:16,0:7:5.75:0,6,44	0/0:10,0:6:8.05:0,8,65	0/0:7,0:24:51.54:0,52,307	1/1:1,16:16:44.93:369,45,0	1/1:2,12:14:22.21:175,22,0	0/0:13,0:29:61.24:0,61,313	0/0:2,0:15:28.44:0,28,143	1/1:3,24:26:65.91:542,66,0	1/1:2,13:14:38.83:303,39,0	0/0:3,0:9:22.96:0,23,132	1/1:2,11:13:32.96:270,33,0	0/0:4,0:9:16.90:0,17,82	0/0:24,0:23:48.11:0,48,504	1/1:2,13:14:32.96:271,33,0	0/0:25,0:25:39.02:0,39,392	1/1:5,20:24:36.36:423,36,0	0/0:6,0:20:46.23:0,46,265	0/0:5,0:16:34.51:0,35,189	0/0:5,0:10:14.24:0,14,71	1/1:0,6:6:17.98:148,18,0	1/1:4,11:15:0.96:214,1,0	1/1:5,12:16:17.95:148,18,0	1/1:3,18:21:44.94:369,45,0	0/0:5,0:21:45.68:0,46,239	0/0:4,0:24:51.11:0,51,255	0/0:4,0:17:37.17:0,37,203
chr10	91229031	.	T	TCGTG	17085.58	PASS	AB=0.909;AC=23;AF=0.411;AN=56;BaseQRankSum=-14.902;DP=773;FS=2.511;HRun=0;HaplotypeScore=113.8079;InbreedingCoeff=0.9256;MQ=71.19;MQ0=0;MQRankSum=-3.284;QD=52.90;ReadPosRankSum=1.983;VQSLOD=5.6567;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,163,2930	0/0:8,0:8:21.07:0,21,364	0/0:22,0:22:39.33:0,39,771	0/0:21,0:21:47.55:0,48,861	0/0:28,0:28:81.28:0,81,1483	1/1:3,21:25:51.18:1358,51,0	1/1:3,26:28:60.21:1596,60,0	0/0:38,0:38:96.31:0,96,1654	0/0:24,0:24:63.22:0,63,1161	1/1:3,31:36:99:2290,99,0	1/1:4,22:26:60.21:1557,60,0	0/0:24,0:24:69.24:0,69,1287	1/1:3,19:25:45.15:1198,45,0	0/0:21,0:21:54.19:0,54,1008	0/0:44,0:44:99:0,117,2154	1/1:2,25:27:69.24:1837,69,0	0/0:31,0:31:81.28:0,81,1496	1/1:2,21:24:51.18:1358,51,0	0/0:14,0:14:42.12:0,42,722	0/0:16,0:16:42.13:0,42,784	0/0:50,0:50:99:0,147,2682	1/1:2,22:25:54.14:1399,54,0	1/1:0,20:24:60.21:1579,60,0	1/1:1,23:25:48.16:1276,48,0	1/1:2,23:27:57.20:1518,57,0	0/1:27,2:30:99:119,0,1340	0/0:27,0:27:75.26:0,75,1392	0/0:23,0:23:69.24:0,69,1287
chr10	91230629	.	T	TTG	1100.77	PASS	AB=0.762;AC=22;AF=0.393;AN=56;BaseQRankSum=6.701;DP=460;FS=56.806;HRun=0;HaplotypeScore=79.4406;InbreedingCoeff=-0.4466;MQ=60.14;MQ0=31;MQRankSum=-3.889;QD=3.59;ReadPosRankSum=2.022;VQSLOD=-0.2049;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:62.97:0,63,728	0/0:8,0:8:20.24:0,20,148	0/0:58,0:17:22.99:0,23,258	0/1:35,0:9:11.86:12,0,20	0/1:16,0:16:24.36:78,0,24	0/1:7,0:14:59.64:60,0,106	1/1:8,0:14:2.02:108,2,0	0/1:11,0:12:27.88:28,0,55	0/1:6,0:13:85.26:85,0,86	0/1:4,1:12:16.45:111,0,16	0/1:8,2:14:32.17:33,0,32	0/1:5,0:10:8.45:114,0,8	0/1:6,0:11:2.88:41,0,3	0/1:3,0:8:3.12:45,0,3	0/0:13,0:12:33.05:0,33,426	0/1:4,1:7:29.36:29,0,34	0/0:29,0:32:83.69:0,84,1016	0/1:15,2:39:15.11:233,0,15	0/1:10,0:13:29.40:29,0,116	0/1:5,0:7:16.27:16,0,33	0/1:11,0:15:16.26:16,0,73	0/1:3,0:3:6.83:16,0,7	0/1:8,0:8:63.10:63,0,80	0/1:4,0:12:2.17:2,0,31	0/0:2,0:11:0.40:0,0,18	0/1:17,0:26:78.94:79,0,145	0/1:8,1:15:12.22:52,0,12	0/0:2,0:6:2.97:0,3,22
chr10	91230948	.	C	CA	6642.14	PASS	AB=0.538;AC=21;AF=0.375;AN=56;BaseQRankSum=-6.391;DP=459;FS=0.792;HRun=0;HaplotypeScore=47.4620;InbreedingCoeff=0.9170;MQ=56.72;MQ0=2;MQRankSum=-5.834;QD=44.58;ReadPosRankSum=0.007;VQSLOD=4.7372;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,1383	0/0:7,0:7:21.07:0,21,293	0/0:17,0:12:30.10:0,30,407	0/0:17,0:12:33.11:0,33,448	1/1:0,9:9:27.09:431,27,0	0/0:19,0:19:56.40:0,56,762	0/0:9,0:9:27.09:0,27,377	1/1:0,21:21:63.21:1006,63,0	1/1:0,16:16:45.15:718,45,0	0/0:15,0:15:45.15:0,45,629	0/0:8,0:8:24.08:0,24,335	1/1:0,12:12:36.12:574,36,0	0/0:12,0:12:36.12:0,36,503	1/1:0,13:13:33.11:527,33,0	0/0:17,0:17:45.14:0,45,611	0/0:19,0:19:51.16:0,51,695	0/0:31,0:31:72.20:0,72,980	0/0:27,0:26:60.20:0,60,833	1/1:0,13:13:39.13:623,39,0	1/1:0,4:4:12.04:192,12,0	1/1:1,13:12:30.10:479,30,0	0/0:6,0:6:18.06:0,18,249	0/0:14,0:14:39.13:0,39,542	0/0:41,0:41:99:0,108,1487	0/0:14,0:14:36.09:0,36,482	0/1:3,18:21:20.53:847,0,21	1/1:0,18:18:54.18:862,54,0	1/1:0,8:8:24.08:383,24,0
chr10	91231613	.	T	TA	2617.39	PASS	AB=0.786;AC=22;AF=0.393;AN=56;BaseQRankSum=-2.643;DP=375;FS=2.707;HRun=10;HaplotypeScore=54.2627;InbreedingCoeff=0.7586;MQ=83.05;MQ0=0;MQRankSum=-2.276;QD=18.43;ReadPosRankSum=-1.545;VQSLOD=3.8093;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:68.90:0,69,566	0/0:5,0:5:8.98:0,9,74	0/1:26,0:16:6.05:6,0,73	0/0:22,0:16:3.27:0,3,44	0/0:22,0:22:56.91:0,57,466	1/1:3,7:10:26.64:258,27,0	1/1:0,5:5:15.04:160,15,0	0/0:19,0:19:41.30:0,41,324	0/0:7,0:7:17.01:0,17,129	1/1:5,8:13:5.43:263,5,0	1/1:1,11:12:33.08:350,33,0	0/0:12,0:12:29.95:0,30,246	1/1:2,6:8:18.05:192,18,0	0/0:4,0:4:11.99:0,12,98	0/0:8,0:8:20.98:0,21,172	1/1:1,5:6:15.04:160,15,0	0/0:16,0:16:47.90:0,48,386	1/1:5,8:14:11.27:302,11,0	0/0:11,0:11:23.96:0,24,197	0/0:20,0:21:43.94:0,44,391	0/0:1,0:1:3:0,3,25	1/1:3,1:4:6.02:64,6,0	1/1:4,8:12:30.07:313,30,0	0/1:2,6:8:25.22:168,0,25	1/1:8,16:24:57.10:588,57,0	0/0:27,1:29:41.88:0,42,528	0/0:19,0:19:53.91:0,54,439	0/0:11,0:12:28.97:0,29,227
chr10	91231665	.	TA	T	4678.16	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=4.635;DP=363;FS=1.118;HRun=10;HaplotypeScore=50.3163;InbreedingCoeff=0.8437;MQ=79.84;MQ0=3;MQRankSum=-1.076;QD=19.41;ReadPosRankSum=2.051;VQSLOD=5.5342;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:89.01:0,89,940	0/0:3,0:3:3.01:0,3,33	0/0:29,0:15:2.24:0,2,149	0/0:27,0:12:8.22:0,8,126	1/1:3,13:16:35.82:300,36,0	1/1:2,9:11:26.99:234,27,0	1/1:2,7:9:20.99:182,21,0	1/1:8,17:25:47.94:413,48,0	1/1:0,6:6:15:131,15,0	1/1:3,8:11:29.98:256,30,0	1/1:4,6:10:23.98:207,24,0	1/1:1,6:7:18:156,18,0	1/1:1,3:4:11.98:100,12,0	1/1:0,4:4:12:104,12,0	0/0:9,0:9:21.05:0,21,225	1/1:1,3:4:9:78,9,0	0/0:21,0:20:33.39:0,33,523	1/1:2,12:14:35.99:313,36,0	1/1:7,20:26:59.97:519,60,0	1/1:3,9:12:17.98:156,18,0	1/1:0,4:4:9:78,9,0	1/1:1,2:3:8.98:74,9,0	1/1:1,9:10:23.83:208,24,0	1/1:0,6:6:12:104,12,0	1/1:3,17:20:35.98:312,36,0	1/1:3,11:14:35.97:308,36,0	1/1:3,10:13:29.98:260,30,0	1/1:3,8:11:20.97:182,21,0
chr10	91232913	.	G	GT	1941.86	PASS	AB=0.917;AC=23;AF=0.411;AN=56;BaseQRankSum=2.000;DP=519;FS=13.110;HRun=11;HaplotypeScore=103.4348;InbreedingCoeff=0.6800;MQ=70.09;MQ0=16;MQRankSum=-1.739;QD=7.04;ReadPosRankSum=-3.948;VQSLOD=-0.0058;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:31.18:0,31,231	0/0:7,0:7:11.29:0,11,78	0/1:36,0:14:9.33:9,0,40	0/1:38,0:18:24.27:24,0,37	1/1:24,4:29:39.70:485,40,0	0/0:13,0:13:20.17:0,20,219	0/0:20,1:20:6.73:0,7,143	1/1:14,13:22:11.83:246,12,0	1/1:13,0:13:16.93:126,17,0	0/0:20,0:19:26.72:0,27,209	0/0:28,0:27:24.66:0,25,301	1/1:7,7:14:7.57:63,8,0	0/0:7,0:6:11.31:0,11,78	1/1:12,1:12:27.98:181,28,0	0/0:12,0:12:23.75:0,24,174	0/0:7,0:7:2.97:0,3,23	0/0:35,0:35:6.20:0,6,330	0/0:25,0:25:43.77:0,44,330	1/1:24,0:20:20.96:189,21,0	1/1:8,3:12:20.69:169,21,0	0/1:4,2:5:11.76:12,0,17	0/0:9,0:9:11.68:0,12,81	0/0:9,0:9:15.36:0,15,102	0/0:5,0:5:11.94:0,12,92	0/0:19,0:19:35.79:0,36,274	1/1:23,2:24:4.23:195,4,0	1/1:20,2:21:31.46:260,31,0	1/1:16,0:16:21.90:187,22,0
chr10	91233966	.	G	GA	4398.58	PASS	AB=0.754;AC=21;AF=0.375;AN=56;BaseQRankSum=-7.105;DP=684;FS=1.505;HRun=12;HaplotypeScore=79.7465;InbreedingCoeff=0.6147;MQ=68.51;MQ0=0;MQRankSum=-0.574;QD=14.01;ReadPosRankSum=-4.031;VQSLOD=4.0746;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:34.44:0,34,372	0/0:15,0:15:38.75:0,39,285	0/1:10,1:11:19.43:19,0,62	0/1:10,0:10:1.25:1,0,42	1/1:7,16:24:0.70:321,1,0	0/0:29,0:29:13.42:0,13,423	0/0:26,0:26:62.56:0,63,460	1/1:13,26:39:21.36:658,21,0	0/1:6,13:20:4.92:267,0,5	0/0:31,0:34:59.69:0,60,411	0/0:22,0:22:41.61:0,42,302	1/1:6,23:29:29.17:445,29,0	0/0:22,1:24:32.48:0,32,392	1/1:3,17:21:19.99:341,20,0	0/0:31,0:32:66.37:0,66,470	0/0:23,2:27:11.26:0,11,385	0/0:29,1:32:17.25:0,17,378	0/0:11,0:13:30.91:0,31,209	1/1:13,11:24:22.93:347,23,0	0/1:11,13:25:81.23:285,0,81	1/1:3,19:24:28.85:410,29,0	0/0:21,2:25:23.82:0,24,314	0/0:23,2:27:26.45:0,26,349	0/0:21,0:22:58.61:0,59,417	0/0:15,0:17:19.28:0,19,248	1/1:11,21:34:45.08:546,45,0	1/1:9,20:30:13.06:427,13,0	0/1:7,14:21:36.54:329,0,37
chr10	91234722	.	GGC	G	659.53	PASS	AC=16;AF=0.320;AN=50;BaseQRankSum=7.705;DP=434;FS=58.306;HRun=0;HaplotypeScore=87.3074;InbreedingCoeff=0.7013;MQ=70.10;MQ0=3;MQRankSum=-0.277;QD=5.74;ReadPosRankSum=2.422;VQSLOD=0.8048;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:48.14:0,48,742	0/0:12,0:10:24.08:0,24,399	0/0:10,0:7:1.89:0,2,8	0/0:17,0:15:0.22:0,0,33	0/0:9,0:9:3:0,3,25	1/1:11,0:11:11.87:90,12,0	1/1:23,0:22:21.05:143,21,0	0/0:18,0:18:20.33:0,20,137	0/0:13,0:13:2.88:0,3,25	1/1:17,0:17:21:143,21,0	1/1:6,0:6:8.27:48,8,0	0/0:16,0:16:14.91:0,15,116	1/1:9,0:9:11.13:72,11,0	0/0:11,0:11:5.98:0,6,48	0/0:10,0:9:5.89:0,6,65	1/1:4,7:11:3:25,3,0	0/0:26,0:26:60.04:0,60,926	1/1:13,0:12:24.49:171,24,0	0/0:14,0:14:13.72:0,14,92	0/0:12,0:12:3:0,3,26	0/0:33,0:31:23.72:0,24,184	./.	./.	1/1:25,0:25:17.95:142,18,0	./.	0/0:20,0:20:9.65:0,10,215	0/0:6,0:6:2.99:0,3,24	0/0:17,0:17:11.69:0,12,72
chr10	91234727	.	GCGCGCGCA	G	2536.94	PASS	AB=1.000;AC=18;AF=0.360;AN=50;BaseQRankSum=1.120;DP=391;FS=44.953;HRun=0;HaplotypeScore=104.6233;InbreedingCoeff=0.6981;MQ=65.33;MQ0=12;MQRankSum=-0.949;QD=17.87;ReadPosRankSum=2.443;VQSLOD=0.7451;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:54.22:0,54,1545	0/0:12,0:10:27.09:0,27,842	0/0:7,0:4:2.97:0,3,24	0/1:11,0:10:5.26:5,0,28	0/0:7,0:7:9.02:0,9,125	1/1:14,0:13:17.87:322,18,0	1/1:22,0:20:26.90:418,27,0	0/0:19,0:19:30.72:0,31,518	0/0:8,0:7:5.98:0,6,144	1/1:17,0:17:24.96:465,25,0	1/1:5,0:5:9.03:176,9,0	0/0:12,0:12:24.03:0,24,394	1/1:7,0:7:15.02:204,15,0	0/0:10,0:9:8.84:0,9,193	0/0:8,0:7:11.87:0,12,291	1/1:8,0:8:3.01:74,3,0	0/0:30,0:29:72.21:0,72,1779	1/1:16,0:13:36.04:603,36,0	0/0:12,0:12:20.19:0,20,291	0/0:8,0:8:7.41:0,7,53	0/0:30,0:27:29.58:0,30,485	./.	./.	1/1:28,0:28:18.06:425,18,0	./.	0/1:14,0:14:29.62:30,0,623	0/0:4,0:4:6.46:0,6,49	0/0:12,0:12:12.04:0,12,211
chr10	91234731	.	GCGCACGCGCACACA	G	2489.88	PASS	AB=1.000;AC=18;AF=0.360;AN=50;BaseQRankSum=0.940;DP=361;FS=51.040;HRun=0;HaplotypeScore=122.2988;InbreedingCoeff=0.7106;MQ=62.61;MQ0=14;MQRankSum=-1.160;QD=19.15;ReadPosRankSum=2.519;VQSLOD=0.5110;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:57.37:0,57,1297	0/0:12,0:10:27.09:0,27,859	0/0:6,0:3:2.92:0,3,18	0/1:9,0:8:1.95:2,0,19	0/0:5,0:5:9.02:0,9,125	1/1:14,0:13:18.34:299,18,0	1/1:21,0:18:26.90:354,27,0	0/0:18,0:18:37.81:0,38,354	0/0:5,0:4:5.70:0,6,99	1/1:2,14:16:25.32:500,25,0	1/1:3,0:3:9.03:179,9,0	0/0:10,0:10:24.03:0,24,300	1/1:5,0:5:15.01:199,15,0	0/0:9,0:8:9.28:0,9,120	0/0:8,0:7:11.91:0,12,407	1/1:8,0:8:3.01:74,3,0	0/0:28,0:27:71.91:0,72,1492	1/1:16,0:13:36.04:614,36,0	0/0:11,0:11:19.11:0,19,141	0/0:8,0:7:7.41:0,7,53	0/0:29,0:25:30:0,30,303	./.	./.	1/1:25,0:25:18.06:423,18,0	./.	0/1:13,0:13:30.22:30,0,274	0/0:3,0:3:6.46:0,6,49	0/0:9,0:9:11.42:0,11,67
chr10	91234733	.	GCACGCGCACACACACACACGCACACACACACA	G	2348.18	PASS	AB=0.982;AC=19;AF=0.380;AN=50;BaseQRankSum=2.071;DP=356;FS=49.826;HRun=0;HaplotypeScore=201.7470;InbreedingCoeff=0.5881;MQ=60.73;MQ0=19;MQRankSum=-1.475;QD=15.97;ReadPosRankSum=1.665;VQSLOD=1.3013;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:51.15:0,51,1835	0/0:13,0:11:27.55:0,28,1642	0/0:4,0:2:2.88:0,3,15	0/1:9,0:8:3.30:3,0,30	0/0:6,0:5:5.99:0,6,50	1/1:13,0:12:14.71:224,15,0	1/1:21,0:18:17.99:286,18,0	0/1:17,0:18:99:116,0,194	0/0:4,0:3:5.95:0,6,74	1/1:16,0:15:21.54:442,22,0	1/1:3,0:3:9.03:165,9,0	0/0:11,0:10:15.47:0,15,150	1/1:6,0:5:9.03:161,9,0	0/0:8,0:7:9.47:0,9,98	0/0:7,0:6:11.06:0,11,828	1/1:8,0:8:3.01:74,3,0	0/0:29,0:28:68.45:0,68,3163	1/1:17,0:14:30.10:583,30,0	0/0:10,0:9:14.71:0,15,106	0/0:8,0:7:1.41:0,1,2	0/0:28,0:23:14.88:0,15,163	./.	./.	1/1:24,0:24:18.06:430,18,0	./.	0/1:12,0:12:39.56:40,0,249	0/0:3,0:3:0.47:0,0,1	0/0:8,0:8:11.15:0,11,56
chr10	91236253	.	C	CA	10323.31	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-17.203;DP=685;FS=7.900;HRun=2;HaplotypeScore=58.2222;InbreedingCoeff=0.9995;MQ=84.98;MQ0=0;MQRankSum=-0.800;QD=37.27;ReadPosRankSum=1.270;VQSLOD=5.2661;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.28:0,90,1112	0/0:8,0:8:24.06:0,24,283	0/0:21,0:21:57.17:0,57,696	0/0:21,0:21:53.84:0,54,587	1/1:0,16:16:45.15:644,45,0	0/0:25,0:25:69.16:0,69,800	0/0:29,0:29:78.23:0,78,952	1/1:1,27:28:78.22:1045,78,0	1/1:2,30:32:75.25:1073,75,0	0/0:26,0:26:75.22:0,75,911	0/0:21,0:21:63.17:0,63,745	1/1:0,30:31:66.22:934,66,0	0/0:25,0:25:72.21:0,72,877	1/1:2,15:17:39.13:558,39,0	0/0:34,0:34:96.28:0,96,1164	0/0:30,0:30:87.22:0,87,1027	0/0:41,0:41:99:0,111,1344	0/0:27,0:27:71.96:0,72,863	1/1:0,20:20:60.19:840,60,0	1/1:0,21:21:60.13:812,60,0	1/1:2,36:38:96.32:1374,96,0	0/0:22,0:22:54.11:0,54,616	0/0:18,0:18:48.14:0,48,582	0/0:11,0:11:27.08:0,27,334	0/0:18,0:18:51.12:0,51,595	1/1:0,26:26:78.26:1110,78,0	1/1:1,31:32:90.30:1288,90,0	1/1:0,16:16:45.15:644,45,0
chr10	91238115	.	A	AC	1141.03	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-7.244;DP=483;FS=7.150;HRun=8;HaplotypeScore=64.6000;InbreedingCoeff=0.7785;MQ=70.02;MQ0=0;MQRankSum=-0.206;QD=19.02;ReadPosRankSum=-0.800;VQSLOD=3.0186;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:33.01:0,33,302	0/0:11,0:11:33.02:0,33,302	0/1:6,0:5:19.10:19,0,53	0/0:9,0:9:13.55:0,14,113	0/0:20,0:20:54.31:0,54,298	0/0:11,0:11:27.01:0,27,247	0/0:21,0:21:51.02:0,51,466	0/0:34,0:34:31.48:0,31,220	0/0:15,0:15:3.48:0,3,98	0/0:28,0:28:66.91:0,67,605	0/0:15,0:15:36.01:0,36,325	0/0:17,0:17:39.68:0,40,210	1/1:6,16:22:28.08:499,28,0	0/0:8,0:8:20.04:0,20,109	0/0:23,0:23:66.02:0,66,599	0/0:25,0:25:66.03:0,66,604	0/0:19,0:19:41.99:0,42,379	0/0:18,0:18:54.03:0,54,494	0/0:17,0:17:16.51:0,17,152	0/0:18,0:18:42.54:0,43,223	0/0:15,0:15:33.43:0,33,157	1/1:2,12:14:30.09:346,30,0	0/0:19,0:19:39.02:0,39,357	0/0:18,0:18:38.06:0,38,378	1/1:2,16:18:14.67:423,15,0	0/0:19,0:19:36.54:0,37,179	0/0:14,0:14:34.40:0,34,180	0/0:13,0:13:33.90:0,34,174
chr10	91240011	.	CCT	C	6720.28	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=12.948;DP=533;FS=42.188;HRun=0;HaplotypeScore=63.1205;InbreedingCoeff=0.9941;MQ=88.41;MQ0=3;MQRankSum=-4.545;QD=42.00;ReadPosRankSum=2.553;VQSLOD=2.8741;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,2497	0/0:6,0:6:18.06:0,18,366	0/0:26,0:26:75.24:0,75,1421	0/0:25,0:23:60.48:0,60,1220	0/0:19,0:19:57.20:0,57,1146	1/1:0,22:21:63.22:1022,63,0	1/1:0,23:23:60.20:978,60,0	0/0:26,0:26:75.24:0,75,1444	0/0:16,0:16:48.16:0,48,974	1/1:0,15:15:39.13:627,39,0	1/1:1,7:7:21.07:342,21,0	0/0:19,0:19:57.20:0,57,1158	1/1:1,11:11:27.09:432,27,0	0/0:18,0:18:54.17:0,54,1046	0/0:27,0:27:81.24:0,81,1538	1/1:0,25:25:69.24:1122,69,0	0/0:29,0:29:87.30:0,87,1754	1/1:0,14:14:33.11:538,33,0	0/0:20,0:20:60.19:0,60,1152	0/0:21,0:21:60.21:0,60,1217	0/0:20,0:20:60.19:0,60,1181	1/1:0,8:8:24.08:390,24,0	1/1:0,6:6:15.05:244,15,0	1/1:0,21:21:45.15:733,45,0	1/1:0,6:6:18.06:293,18,0	0/0:33,0:33:99:0,99,2006	0/0:19,0:19:57.18:0,57,1092	0/0:8,0:8:24.08:0,24,487
chr10	91240321	.	G	GC	1541.03	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=7.222;DP=364;FS=10.993;HRun=10;HaplotypeScore=46.8571;InbreedingCoeff=0.5040;MQ=66.13;MQ0=18;MQRankSum=-3.398;QD=6.45;ReadPosRankSum=-1.269;VQSLOD=0.0616;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:48.07:0,48,520	0/1:2,0:2:0:0,0,0	0/0:38,0:8:9.80:0,10,69	0/1:24,0:13:4.34:4,0,36	1/1:3,0:3:0.13:20,0,0	1/1:9,0:8:2.98:21,3,0	1/1:22,0:25:17.63:249,18,0	1/1:13,4:18:20.85:174,21,0	1/1:2,9:11:5.97:52,6,0	1/1:6,0:6:5.71:32,6,0	1/1:8,0:8:11.41:71,11,0	1/1:5,7:13:4.31:48,4,0	1/1:10,0:10:11.96:102,12,0	1/1:3,5:9:8.97:82,9,0	0/0:18,0:18:37.56:0,38,301	1/1:7,0:7:8.91:61,9,0	0/0:35,0:35:95.75:0,96,769	1/1:15,0:15:14.50:92,14,0	1/1:8,1:8:2.04:76,2,0	1/1:1,3:3:3.01:32,3,0	1/1:16,1:17:4.33:46,4,0	1/1:7,0:7:2.07:18,2,0	1/1:3,0:4:5.87:41,6,0	1/1:11,0:10:23.81:177,24,0	1/1:4,0:4:5.01:27,5,0	1/1:5,3:10:13.86:130,14,0	1/1:3,3:7:12.75:109,13,0	1/1:2,1:3:3.48:33,3,0
chr10	91240331	.	C	CCA	2374.27	PASS	AB=0.991;AC=30;AF=0.536;AN=56;BaseQRankSum=-0.874;DP=442;FS=10.645;HRun=0;HaplotypeScore=70.4765;InbreedingCoeff=0.3270;MQ=75.46;MQ0=13;MQRankSum=-2.652;QD=10.32;ReadPosRankSum=2.170;VQSLOD=2.3819;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:71.34:0,71,948	0/0:4,0:4:5.93:0,6,42	0/0:40,0:9:13.99:0,14,167	0/0:34,0:23:20.02:0,20,176	0/1:7,0:7:10.77:11,0,32	1/1:0,10:10:3.01:54,3,0	1/1:4,20:27:27.41:639,27,0	0/1:17,0:17:40.36:57,0,40	0/1:12,1:13:6.32:51,0,6	1/1:1,4:6:12.01:133,12,0	1/1:1,7:10:14.49:193,14,0	0/1:16,0:16:11.11:11,0,20	1/1:1,10:12:12.04:190,12,0	0/1:9,0:9:10.30:16,0,10	0/0:20,0:20:47.58:0,48,583	1/1:0,7:8:9.03:164,9,0	0/0:36,0:36:99:0,102,1290	1/1:2,12:16:17.38:240,17,0	0/1:10,0:11:11.97:12,0,31	0/0:10,0:9:2.95:0,3,19	0/0:22,0:22:15.56:0,16,70	1/1:4,0:15:8.58:61,9,0	1/1:1,7:8:6.83:111,7,0	1/1:12,5:17:42.01:518,42,0	1/1:0,5:6:5.61:64,6,0	0/1:12,0:12:15.92:16,0,25	0/1:9,0:9:20.37:23,0,20	0/0:9,0:9:5.93:0,6,33
chr10	91240554	.	A	AG	1749.43	PASS	AB=0.731;AC=37;AF=0.661;AN=56;BaseQRankSum=0.973;DP=381;FS=1.267;HRun=10;HaplotypeScore=77.2567;InbreedingCoeff=0.2294;MQ=78.52;MQ0=0;MQRankSum=-3.412;QD=6.23;ReadPosRankSum=-3.877;VQSLOD=0.9925;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:43.94:0,44,347	0/0:9,0:9:11.95:0,12,98	0/1:10,0:12:37.02:37,0,51	0/0:14,0:14:0.09:0,0,60	1/1:11,0:12:2.84:14,3,0	0/1:6,3:9:37.26:52,0,37	1/1:6,15:21:36.09:381,36,0	1/1:13,0:15:2.84:14,3,0	1/1:11,0:12:5.96:45,6,0	1/1:4,4:8:6.02:64,6,0	1/1:5,3:9:8.86:78,9,0	1/1:10,0:15:15.82:90,16,0	0/1:9,6:15:9.60:113,0,10	1/1:11,1:13:11.90:90,12,0	0/0:19,0:20:46.94:0,47,370	0/1:4,7:11:6.58:142,0,7	0/0:30,0:30:59.87:0,60,493	0/1:6,9:16:25.41:137,0,25	1/1:14,0:15:8.68:49,9,0	1/1:7,0:8:3:29,3,0	1/1:18,1:21:5.81:34,6,0	0/1:6,2:8:15.60:55,0,16	0/0:1,0:1:3:0,3,25	0/1:4,6:10:23.01:139,0,23	1/1:7,7:14:15.04:160,15,0	1/1:10,0:12:8.72:55,9,0	1/1:13,0:19:21.31:124,21,0	1/1:5,0:6:3.44:21,3,0
chr10	91240590	.	CCTGA	C	2147	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=10.305;DP=286;FS=97.368;HRun=0;HaplotypeScore=68.4257;InbreedingCoeff=0.9049;MQ=72.04;MQ0=1;MQRankSum=-9.404;QD=32.53;ReadPosRankSum=0.272;VQSLOD=-0.1145;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.18:0,75,1887	0/0:10,0:10:30.06:0,30,788	0/0:18,0:16:48.12:0,48,1050	0/0:19,0:18:47.20:0,47,1042	./.	0/0:9,0:9:21.07:0,21,606	0/0:16,0:16:39.13:0,39,1038	1/1:0,11:11:30.10:501,30,0	1/1:1,7:8:24.03:332,24,0	0/0:7,0:7:17.81:0,18,460	0/0:5,0:5:15.05:0,15,433	1/1:1,5:6:15.05:217,15,0	0/0:11,0:11:30.10:0,30,858	1/1:1,6:7:21.02:282,21,0	0/0:22,0:22:63.11:0,63,1627	0/0:5,0:5:12.04:0,12,344	0/0:28,0:28:78.22:0,78,2068	0/0:16,0:16:39.13:0,39,1123	1/1:0,3:3:9.03:149,9,0	1/1:0,1:1:3.01:36,3,0	1/1:0,12:12:15.05:220,15,0	0/0:4,0:4:12.04:0,12,300	0/0:3,0:3:9.03:0,9,253	0/0:12,0:12:33.11:0,33,954	0/0:7,0:7:21.07:0,21,585	1/1:0,7:7:21.07:332,21,0	1/1:1,9:10:15.05:237,15,0	1/1:0,1:1:3.01:44,3,0
chr10	91240598	.	G	GCA	3205.27	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=10.932;DP=325;FS=81.171;HRun=0;HaplotypeScore=67.4836;InbreedingCoeff=0.9433;MQ=67.11;MQ0=1;MQRankSum=-8.368;QD=35.61;ReadPosRankSum=-1.929;VQSLOD=0.0881;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.22:0,66,1061	0/0:10,0:10:30.10:0,30,480	0/0:20,0:18:49.38:0,49,714	0/0:23,0:22:53.17:0,53,737	./.	0/0:10,0:10:27.09:0,27,424	0/0:17,0:17:42.13:0,42,651	1/1:4,11:15:36.12:576,36,0	1/1:0,8:8:24.08:356,24,0	0/0:8,0:8:18.06:0,18,281	0/0:6,0:6:18.06:0,18,292	1/1:0,5:5:15.05:206,15,0	0/0:14,0:14:36.09:0,36,521	1/1:0,9:9:24.08:363,24,0	0/0:22,0:22:66.22:0,66,1060	0/0:7,0:7:15.03:0,15,209	0/0:26,0:26:75.24:0,75,1196	0/0:16,0:16:39.13:0,39,624	1/1:1,5:6:18.06:308,18,0	1/1:0,4:4:9.03:128,9,0	1/1:2,17:19:27.09:434,27,0	0/0:6,0:6:18.06:0,18,263	0/0:3,0:3:9:0,9,119	0/0:16,0:16:39.13:0,39,630	0/0:6,0:6:18.06:0,18,293	1/1:3,8:11:30.10:491,30,0	1/1:3,9:12:30.10:512,30,0	1/1:0,1:1:3.01:41,3,0
chr10	91240751	.	C	CGTACTCAATAACCTGTTT	1340.31	PASS	AB=0.656;AC=10;AF=0.833;AN=12;BaseQRankSum=-2.824;DP=32;FS=23.173;HRun=0;HaplotypeScore=30.3334;MQ=176.33;MQ0=0;MQRankSum=-0.324;QD=58.27;ReadPosRankSum=1.250;VQSLOD=0.9627;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:3:25,3,0	./.	0/1:2,1:9:27.01:1004,0,27	0/1:4,0:6:46.48:185,0,46	./.	./.	1/1:2,0:2:3.01:48,3,0	1/1:1,0:1:3.01:43,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:2,0:2:3.01:112,3,0	./.	./.	./.
chr10	91242658	.	CTA	C	5916.18	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=6.477;DP=388;FS=3.870;HRun=0;HaplotypeScore=80.5118;InbreedingCoeff=0.8358;MQ=74.54;MQ0=7;MQRankSum=-5.055;QD=20.19;ReadPosRankSum=3.837;VQSLOD=4.6217;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.10:0,54,812	0/0:14,0:14:30.36:0,30,420	0/0:12,0:12:19.11:0,19,193	0/0:11,0:9:20.93:0,21,256	1/1:4,14:18:13.84:200,14,0	1/1:2,20:21:42.14:560,42,0	1/1:1,8:8:15.05:197,15,0	1/1:4,12:13:27.03:338,27,0	1/1:2,3:4:6.02:81,6,0	1/1:5,13:18:47.82:563,48,0	1/1:22,0:22:17.68:168,18,0	1/1:2,6:8:18.06:243,18,0	1/1:4,9:13:26.13:299,26,0	1/1:0,5:5:9.03:122,9,0	0/0:14,0:14:33.09:0,33,497	1/1:9,8:17:33.52:368,34,0	0/0:24,0:24:54.16:0,54,870	1/1:4,11:14:27.09:358,27,0	1/1:4,8:10:21.07:283,21,0	1/1:2,14:13:22.31:281,22,0	1/1:0,8:5:6.02:81,6,0	1/1:2,8:10:8.89:218,9,0	1/1:7,8:13:0.61:123,1,0	1/1:3,0:3:3.01:32,3,0	1/1:7,7:14:8.93:246,9,0	1/1:4,9:13:30.99:372,31,0	1/1:6,15:20:22.73:546,23,0	1/1:7,6:12:20.89:237,21,0
chr10	91242661	.	TATATAA	T	4621.79	PASS	AB=0.971;AC=30;AF=0.536;AN=56;BaseQRankSum=-0.250;DP=393;FS=2.010;HRun=0;HaplotypeScore=113.2510;InbreedingCoeff=-0.0665;MQ=73.21;MQ0=7;MQRankSum=-0.268;QD=15.67;ReadPosRankSum=8.688;VQSLOD=3.0211;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.17:0,57,1536	0/0:15,0:15:33.37:0,33,634	0/0:11,0:11:16.61:0,17,190	0/0:12,0:9:20.89:0,21,305	0/1:19,0:19:72.79:73,0,91	0/1:23,0:22:20.27:467,0,20	0/1:11,0:10:51.50:279,0,52	1/1:14,0:11:27.04:486,27,0	1/1:4,0:3:5.93:57,6,0	0/1:20,0:20:57.97:518,0,58	0/1:6,14:20:62.27:167,0,62	1/1:6,0:6:17.42:93,17,0	0/1:13,0:13:54.04:373,0,54	1/1:5,0:5:8.79:54,9,0	0/0:17,0:17:45.13:0,45,915	0/1:17,0:17:38.10:484,0,38	0/0:22,0:22:54.18:0,54,1363	1/1:14,0:13:22.06:417,22,0	1/1:11,0:9:20.42:140,20,0	0/1:17,0:14:98.81:122,0,99	1/1:8,0:5:5.83:32,6,0	0/1:11,0:11:96.26:255,0,96	0/1:15,0:13:99:157,0,120	1/1:4,0:4:2.04:6,2,0	0/1:15,0:15:56.47:56,0,477	0/1:13,0:13:99:129,0,152	0/1:22,0:21:99:171,0,195	0/1:13,0:12:77.24:86,0,77
chr10	91242663	.	T	TAA	4895.44	PASS	AB=0.986;AC=43;AF=0.768;AN=56;BaseQRankSum=9.076;DP=398;FS=3.703;HRun=1;HaplotypeScore=100.2723;InbreedingCoeff=0.6257;MQ=67.98;MQ0=9;MQRankSum=-5.561;QD=15.35;ReadPosRankSum=1.621;VQSLOD=2.2966;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:55.74:0,56,813	0/0:15,0:15:10.28:0,10,327	0/0:8,0:8:19.11:0,19,193	0/0:11,0:8:20.94:0,21,244	1/1:20,1:21:30.31:179,30,0	0/1:21,1:21:9.21:186,0,9	0/1:12,0:11:28.62:74,0,29	1/1:17,1:12:24.34:195,24,0	1/1:3,0:2:5.91:56,6,0	1/1:20,2:22:40.84:500,41,0	1/1:19,2:21:26.46:263,26,0	1/1:8,0:8:20.37:113,20,0	1/1:11,1:12:29.36:281,29,0	1/1:6,0:6:11.81:78,12,0	0/1:17,0:17:63.21:63,0,353	1/1:10,9:19:34.77:343,35,0	0/0:22,0:22:54.17:0,54,797	1/1:11,1:11:16.54:155,17,0	1/1:10,1:8:23.32:157,23,0	1/1:18,1:17:32.86:236,33,0	1/1:8,0:5:5.81:31,6,0	1/1:10,1:11:23.19:207,23,0	1/1:13,2:13:26.70:281,27,0	1/1:1,2:3:3.01:57,3,0	1/1:14,1:15:44.52:479,45,0	1/1:11,1:12:35.25:316,35,0	1/1:19,3:21:53.04:422,53,0	1/1:7,2:8:20.71:223,21,0
chr10	91242681	.	T	TAAAG	4399.88	PASS	AB=1.000;AC=47;AF=0.904;AN=52;BaseQRankSum=4.065;DP=390;FS=3.064;HRun=0;HaplotypeScore=122.0684;InbreedingCoeff=0.6518;MQ=52.51;MQ0=8;MQRankSum=0.321;QD=12.90;ReadPosRankSum=-2.632;VQSLOD=3.9433;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:39.01:0,39,456	1/1:3,6:9:14.69:153,15,0	./.	./.	1/1:20,0:20:27.73:240,28,0	0/1:21,0:21:0.74:62,0,1	1/1:11,0:10:12.46:102,12,0	1/1:25,0:19:3.74:9,4,0	1/1:4,0:4:8.98:72,9,0	1/1:21,0:20:32.33:393,32,0	1/1:21,0:21:27.02:291,27,0	1/1:10,0:10:8.95:79,9,0	1/1:12,0:12:15.02:183,15,0	1/1:9,0:9:14.89:112,15,0	1/1:15,0:15:30.05:431,30,0	1/1:18,0:18:18.03:247,18,0	0/0:19,0:19:32.90:0,33,359	1/1:15,0:15:15.61:143,16,0	1/1:17,0:13:5.98:49,6,0	1/1:16,0:15:20.88:187,21,0	1/1:9,0:7:5.94:43,6,0	1/1:6,0:6:12.01:124,12,0	1/1:14,0:12:18.05:281,18,0	1/1:10,0:10:11.99:115,12,0	1/1:13,0:13:24.08:465,24,0	1/1:15,0:14:21.01:220,21,0	1/1:20,0:20:23.91:275,24,0	1/1:10,0:10:12.48:123,12,0
chr10	91244494	.	G	GGTGTGTGTGTGTGTGTG	27929.23	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=11.144;DP=614;FS=13.798;HRun=0;HaplotypeScore=364.0050;InbreedingCoeff=0.8109;MQ=58.43;MQ0=3;MQRankSum=-11.113;QD=57.23;ReadPosRankSum=2.448;VQSLOD=3.3654;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:96.23:0,96,4032	0/0:14,0:14:42.14:0,42,1788	0/1:29,0:21:99:109,0,923	0/0:25,0:18:22.01:0,22,530	1/1:22,0:21:9:328,9,0	1/1:23,0:22:30.10:1745,30,0	1/1:25,0:25:39:1525,39,0	1/1:32,0:30:39.89:1245,40,0	1/1:19,0:19:12.04:563,12,0	1/1:23,0:23:48.09:2378,48,0	1/1:17,7:25:15.05:941,15,0	1/1:17,0:16:24.05:1218,24,0	1/1:23,0:23:30.02:1334,30,0	1/1:31,0:30:30.10:1693,30,0	0/0:24,0:24:48.15:0,48,2074	1/1:18,6:27:30.10:1728,30,0	0/0:21,0:21:36.05:0,36,1343	1/1:15,0:15:27.08:1646,27,0	1/1:19,0:18:29.89:851,30,0	1/1:20,0:20:18.06:968,18,0	1/1:6,0:6:3.01:165,3,0	1/1:13,7:22:27.09:1725,27,0	1/1:24,0:24:25.31:1349,25,0	1/1:15,0:14:11.16:617,11,0	1/1:23,0:23:39.07:1631,39,0	1/1:17,0:17:39.12:1570,39,0	1/1:22,0:22:39.13:1977,39,0	1/1:8,0:8:9.03:623,9,0
chr10	91247019	.	CG	C	7400.60	PASS	AB=0.805;AC=45;AF=0.804;AN=56;BaseQRankSum=2.484;DP=526;FS=2.383;HRun=10;HaplotypeScore=57.7154;InbreedingCoeff=0.5563;MQ=78.96;MQ0=1;MQRankSum=0.022;QD=16.19;ReadPosRankSum=5.000;VQSLOD=5.2982;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:23,1:24:16.74:17,0,385	0/0:6,0:6:3.32:0,3,58	0/0:20,0:15:12.02:0,12,122	0/0:17,0:17:6.01:0,6,146	1/1:3,14:18:41.01:338,41,0	1/1:2,16:18:47.98:417,48,0	1/1:2,12:15:32.03:266,32,0	1/1:5,8:13:20.98:181,21,0	1/1:3,16:19:38.99:338,39,0	1/1:3,14:17:40.25:360,40,0	1/1:4,16:20:38.74:338,39,0	1/1:2,18:20:50.98:443,51,0	1/1:3,8:11:17.98:156,18,0	1/1:5,15:20:35.99:312,36,0	0/1:24,3:27:18.26:18,0,454	1/1:7,29:37:82.05:689,82,0	0/0:26,0:26:31.02:0,31,483	0/1:2,8:10:5.28:152,0,5	1/1:4,21:25:62.97:545,63,0	1/1:3,11:14:0.50:158,1,0	1/1:4,30:34:74.98:651,75,0	1/1:3,18:21:41.66:350,42,0	1/1:2,7:9:17.99:155,18,0	1/1:5,20:25:59.83:501,60,0	1/1:3,8:12:20.02:162,20,0	1/1:3,12:15:38.96:334,39,0	1/1:5,18:23:17.54:337,18,0	1/1:0,10:10:21:182,21,0
chr10	91249108	.	T	TAAAACAAAAC	37293.83	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-4.735;DP=569;FS=3.294;HRun=0;HaplotypeScore=137.7513;InbreedingCoeff=0.9750;MQ=49.41;MQ0=4;MQRankSum=-13.061;QD=82.88;ReadPosRankSum=-3.366;VQSLOD=4.4296;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:81.26:0,81,2201	0/0:7,0:7:18.06:0,18,560	0/0:14,0:10:17.99:0,18,448	0/0:9,0:7:18.06:0,18,556	1/1:15,10:27:42.14:1694,42,0	1/1:10,6:16:27.09:1377,27,0	1/1:7,9:15:36.12:1488,36,0	1/1:32,3:33:39.13:1380,39,0	1/1:13,11:24:57.20:2451,57,0	1/1:12,10:24:54.18:2195,54,0	1/1:12,10:23:42.14:1842,42,0	1/1:11,7:19:33.11:1613,33,0	1/1:10,10:19:33.11:1678,33,0	1/1:9,4:13:21.07:1022,21,0	0/0:25,0:25:69.21:0,69,1883	1/1:7,11:19:39.13:1889,39,0	0/0:32,0:32:81.28:0,81,2462	1/1:5,4:10:12.04:545,12,0	1/1:16,3:18:30.05:1084,30,0	1/1:8,22:28:75.26:3756,75,0	1/1:6,4:8:12.04:553,12,0	1/1:6,5:12:27.09:1252,27,0	1/1:11,13:23:48.16:2373,48,0	1/1:2,5:7:12.04:612,12,0	1/1:12,9:22:39.13:1809,39,0	1/1:16,16:32:69.24:2851,69,0	1/1:14,12:26:48.16:2347,48,0	1/1:6,9:15:30.10:1480,30,0
chr10	91249624	.	T	TA	1121.89	PASS	AB=0.842;AC=23;AF=0.411;AN=56;BaseQRankSum=-4.512;DP=429;FS=3.346;HRun=15;HaplotypeScore=62.6744;InbreedingCoeff=0.3415;MQ=80.42;MQ0=1;MQRankSum=1.615;QD=4.58;ReadPosRankSum=-2.666;VQSLOD=1.0310;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:15:13.77:0,14,110	0/0:3,0:3:5.84:0,6,34	0/0:21,0:14:10.61:0,11,53	0/0:22,0:16:10.49:0,10,57	1/1:6,13:20:15.02:223,15,0	0/1:16,1:17:0.43:0,0,97	0/0:14,0:14:13.68:0,14,78	0/1:14,10:25:3:168,0,3	0/1:7,2:9:6.53:38,0,7	0/1:19,2:22:20.68:21,0,104	0/0:14,0:17:20.81:0,21,117	1/1:4,7:11:5.99:51,6,0	0/0:16,0:16:13.80:0,14,148	1/1:2,12:14:16.23:129,16,0	0/0:28,0:29:20.24:0,20,216	0/1:9,1:10:10.53:11,0,56	0/1:14,3:19:0.65:1,0,95	0/0:8,0:9:7.56:0,8,55	0/1:14,6:21:13.40:155,0,13	0/1:12,5:17:24.70:52,0,25	1/1:0,8:8:11.99:101,12,0	0/0:13,0:15:30.67:0,31,178	0/1:8,0:10:19.41:19,0,57	0/0:10,0:10:20.51:0,21,126	0/0:12,1:13:11.65:0,12,71	1/1:9,13:23:15.09:209,15,0	1/1:7,8:15:11.99:101,12,0	1/1:3,0:3:3:25,3,0
chr10	91251268	.	T	TA	3600.47	PASS	AB=0.788;AC=25;AF=0.446;AN=56;BaseQRankSum=-7.600;DP=666;FS=3.241;HRun=13;HaplotypeScore=74.4255;InbreedingCoeff=0.3776;MQ=71.07;MQ0=1;MQRankSum=2.416;QD=8.72;ReadPosRankSum=-0.934;VQSLOD=2.8006;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:32:70.44:0,70,445	0/0:8,0:8:17.83:0,18,122	0/1:18,0:18:14.92:15,0,65	0/0:19,0:14:12.54:0,13,82	1/1:6,15:22:41.66:352,42,0	0/0:24,1:25:56.36:0,56,386	0/0:20,2:22:10.62:0,11,215	0/1:12,27:39:16.92:492,0,17	1/1:7,15:22:27.03:251,27,0	0/0:34,0:34:74.16:0,74,506	0/0:16,0:20:38.65:0,39,235	0/1:7,18:27:2.41:238,0,2	0/0:24,1:25:19.52:0,20,287	1/1:4,13:19:14.02:148,14,0	0/1:22,3:25:17.17:17,0,186	0/0:28,0:30:42.87:0,43,430	0/0:17,0:17:44.58:0,45,308	0/1:18,2:20:5.17:5,0,254	1/1:7,13:21:8.78:304,9,0	1/1:10,21:33:25.26:375,25,0	1/1:11,14:26:36.76:323,37,0	0/1:19,5:24:60.94:61,0,213	0/1:16,4:23:68.69:69,0,152	0/1:10,4:16:52.19:52,0,117	0/0:19,0:20:40.05:0,40,285	1/1:7,20:27:15.16:403,15,0	0/1:11,14:25:2.25:216,0,2	1/1:5,17:25:3.41:281,3,0
chr10	91251731	.	TAC	T	161.15	PASS	AB=0.987;AC=11;AF=0.229;AN=48;BaseQRankSum=-2.847;DP=535;FS=14.678;HRun=0;HaplotypeScore=90.4340;InbreedingCoeff=0.2573;MQ=56.15;MQ0=29;MQRankSum=1.798;QD=1.05;ReadPosRankSum=-2.170;VQSLOD=0.1182;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,2:27:27.12:27,0,47	0/1:7,0:6:0.09:0,0,0	./.	./.	0/1:19,0:19:2.22:2,0,25	0/0:14,0:13:3.93:0,4,12	0/0:29,0:23:2.36:0,2,22	./.	0/0:16,0:16:22.54:0,23,142	1/1:23,0:21:4.62:37,5,0	0/1:14,0:14:5.93:6,0,9	0/0:16,0:16:26.56:0,27,170	0/0:9,0:8:2.97:0,3,20	0/0:13,0:13:8.90:0,9,63	0/1:23,0:21:2.57:72,0,3	1/1:17,0:16:0.43:1,0,0	1/1:21,2:23:13.54:133,14,0	0/0:18,0:15:2.04:0,2,6	0/0:16,0:15:8.37:0,8,58	0/0:24,0:23:4.67:0,5,101	0/0:31,0:28:3.53:0,4,51	0/0:13,0:13:11.16:0,11,77	0/0:14,0:14:6.45:0,6,48	0/0:23,0:23:2.16:0,2,17	0/0:9,0:9:3.47:0,3,26	0/0:22,0:18:14.65:0,15,103	0/0:17,0:17:11.66:0,12,71	./.
chr10	91251763	.	CACACACACACACACACACATACACACACACACACAT	C	763.79	PASS	AB=0.977;AC=12;AF=0.240;AN=50;BaseQRankSum=4.764;DP=487;FS=6.697;HRun=0;HaplotypeScore=322.4241;InbreedingCoeff=-0.1474;MQ=44.23;MQ0=61;MQRankSum=4.016;QD=3.71;ReadPosRankSum=-3.926;VQSLOD=1.0460;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:22:27.09:0,27,2512	0/0:12,0:11:18.53:0,19,2042	./.	./.	0/1:23,0:22:16.36:16,0,22	0/0:14,0:12:19.82:0,20,313	0/1:31,0:22:12.03:12,0,95	0/1:15,0:12:70.95:171,0,71	0/0:20,0:18:24.18:0,24,176	0/1:21,9:22:59.02:270,0,59	1/1:13,0:12:9.33:109,9,0	0/0:21,0:21:0.82:0,1,260	0/0:8,0:6:10.95:0,11,98	0/1:14,0:11:13.96:14,0,62	0/0:26,0:23:53.85:0,54,3428	0/1:15,0:12:4.33:4,0,211	0/0:27,0:26:46.62:0,47,3133	0/0:16,0:12:5.16:0,5,63	0/1:24,0:21:99:174,0,255	0/0:29,0:27:2.14:0,2,117	0/0:32,0:24:14.91:0,15,227	0/1:14,0:14:4.52:5,0,213	0/0:7,0:7:15.05:0,15,260	0/0:22,0:20:26.53:0,27,510	0/0:8,0:7:7.39:0,7,105	0/1:21,0:16:84.53:85,0,261	0/1:6,0:6:43.22:43,0,64	./.
chr10	91251781	.	CAT	C	2387.57	PASS	AB=0.986;AC=42;AF=0.750;AN=56;BaseQRankSum=7.302;DP=510;FS=19.462;HRun=0;HaplotypeScore=100.5613;InbreedingCoeff=-0.0430;MQ=48.19;MQ0=66;MQRankSum=2.347;QD=5.06;ReadPosRankSum=-1.412;VQSLOD=1.0208;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:22:31.65:32,0,149	0/1:12,0:11:1.05:1,0,136	0/0:15,0:3:3.76:0,4,17	0/0:23,0:1:0.47:0,0,1	1/1:19,0:18:2.84:14,3,0	1/1:13,0:11:26.16:200,26,0	1/1:25,0:16:20.91:169,21,0	0/1:23,0:19:9.63:86,0,10	1/1:18,0:16:0.94:3,1,0	1/1:20,0:13:27.32:203,27,0	0/1:14,0:13:9.07:63,0,9	1/1:22,0:22:6.37:42,6,0	1/1:5,0:3:8.91:65,9,0	1/1:11,0:8:6.41:49,6,0	0/1:26,0:23:94.94:95,0,244	1/1:15,0:12:23.86:183,24,0	0/1:28,3:30:99:122,0,165	0/1:16,0:12:4.41:116,0,4	0/1:29,0:26:68.20:160,0,68	1/1:23,0:21:2.93:18,3,0	1/1:33,0:25:5.22:28,5,0	1/1:14,0:14:17.75:130,18,0	1/1:8,0:8:14.96:119,15,0	1/1:21,0:19:29.69:220,30,0	1/1:12,0:11:23.81:200,24,0	0/1:19,1:16:14.99:129,0,15	0/1:10,0:10:14.08:14,0,14	1/1:2,5:5:8.97:70,9,0
chr10	91251785	.	CACACACACACACAT	C	3525.74	PASS	AB=1.000;AC=35;AF=0.673;AN=52;BaseQRankSum=3.796;DP=507;FS=9.249;HRun=0;HaplotypeScore=163.9742;InbreedingCoeff=0.5863;MQ=48.22;MQ0=62;MQRankSum=2.159;QD=11.67;ReadPosRankSum=-2.015;VQSLOD=1.8711;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:45.08:0,45,1168	0/0:11,0:11:24.08:0,24,837	0/0:21,0:4:7.05:0,7,120	0/0:29,0:3:3.33:0,3,104	./.	1/1:11,0:10:0.75:108,1,0	1/1:23,0:15:17.25:143,17,0	1/1:5,18:20:54.13:872,54,0	0/0:16,0:14:0.47:0,0,1	1/1:20,0:14:14.88:120,15,0	1/1:14,0:13:11.98:100,12,0	1/1:22,0:22:0.33:48,0,0	1/1:5,0:3:8.92:67,9,0	1/1:11,0:8:6.02:125,6,0	0/0:28,0:25:52.38:0,52,1144	1/1:13,0:11:14.04:124,14,0	0/0:31,0:30:58.74:0,59,1330	0/1:16,0:12:11.43:105,0,11	1/1:17,12:25:36.65:580,37,0	./.	0/1:31,0:24:0.03:0,0,0	1/1:13,0:13:14.98:124,15,0	1/1:3,0:3:5.99:48,6,0	0/1:20,0:18:1.77:106,0,2	1/1:10,0:10:20.52:177,21,0	1/1:18,0:14:14.87:285,15,0	1/1:10,0:10:2.05:50,2,0	1/1:10,0:8:18.06:343,18,0
chr10	91251799	.	T	TAC	2047.30	PASS	AB=0.690;AC=34;AF=0.680;AN=50;BaseQRankSum=6.616;DP=456;FS=9.312;HRun=0;HaplotypeScore=83.8051;InbreedingCoeff=0.5175;MQ=53.26;MQ0=53;MQRankSum=0.676;QD=8.16;ReadPosRankSum=-1.703;VQSLOD=2.2170;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:7.84:0,8,541	0/0:12,0:12:24.07:0,24,297	0/0:34,0:8:18.27:0,18,208	0/0:40,0:9:15.57:0,16,193	./.	1/1:11,0:10:0.45:1,0,0	1/1:18,0:10:2.44:24,2,0	1/1:23,0:21:54.16:773,54,0	0/1:3,8:10:0:0,0,0	1/1:19,0:14:2.31:22,2,0	1/1:8,0:7:5.99:52,6,0	0/1:4,12:16:24.64:25,0,26	1/1:6,0:5:0.84:2,1,0	1/1:6,0:4:6.02:76,6,0	0/0:25,0:23:48.14:0,48,582	1/1:14,0:12:0.94:2,1,0	0/0:33,0:32:47.88:0,48,595	0/1:14,0:11:3.37:3,0,10	1/1:15,0:12:34.34:422,34,0	./.	0/1:9,16:21:0:0,0,0	1/1:10,0:10:3:25,3,0	./.	1/1:14,0:13:3.93:25,4,0	1/1:9,0:9:3.14:8,3,0	1/1:10,0:7:18.06:263,18,0	1/1:1,8:9:3:29,3,0	1/1:12,0:12:30.10:449,30,0
chr10	91252647	.	TCA	T	351.42	PASS	AB=0.983;AC=14;AF=0.250;AN=56;BaseQRankSum=3.600;DP=555;FS=6.414;HRun=0;HaplotypeScore=69.6723;InbreedingCoeff=-0.1137;MQ=49.20;MQ0=49;MQRankSum=2.054;QD=1.83;ReadPosRankSum=1.647;VQSLOD=0.6817;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:48.20:0,48,683	0/0:8,0:8:11.11:0,11,113	0/0:82,0:15:24.11:0,24,221	0/0:69,0:10:10.04:0,10,110	0/0:23,0:24:13.77:0,14,346	0/1:19,0:19:26.98:27,0,66	1/1:11,1:11:14.20:96,14,0	0/0:33,0:26:56.83:0,57,547	0/0:10,0:13:26.14:0,26,187	0/1:24,0:23:2.31:2,0,149	0/1:19,1:19:57.20:57,0,97	0/0:6,0:5:8.85:0,9,58	0/1:9,0:9:11.50:20,0,11	0/1:7,0:7:6.82:7,0,13	0/0:12,0:12:15.55:0,16,161	0/1:9,0:7:4.27:4,0,16	0/0:29,0:28:37.04:0,37,503	0/1:17,4:20:38.15:148,0,38	0/0:14,0:12:21.46:0,21,198	0/0:11,0:13:20.98:0,21,210	0/0:3,0:3:6.01:0,6,70	0/1:16,0:16:26.09:26,0,88	0/1:13,0:13:19.40:19,0,45	0/1:15,0:15:31.01:44,0,31	0/1:18,0:15:46.13:46,0,59	0/0:16,0:15:29.58:0,30,374	0/0:7,0:6:9.03:0,9,124	0/1:8,0:7:5.30:5,0,71
chr10	91254608	.	CA	C	1115.01	PASS	AB=0.762;AC=18;AF=0.321;AN=56;BaseQRankSum=-2.063;DP=530;FS=1.497;HRun=16;HaplotypeScore=78.0471;InbreedingCoeff=0.3420;MQ=55.38;MQ0=12;MQRankSum=2.973;QD=4.18;ReadPosRankSum=3.374;VQSLOD=1.1575;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:25:38.61:0,39,297	0/1:9,1:10:3.03:3,0,86	0/0:15,0:5:11.25:0,11,61	0/1:2,0:2:0.67:1,0,8	1/1:9,15:24:39.07:222,39,0	0/0:11,0:17:31.59:0,32,173	0/0:14,0:18:34.72:0,35,200	1/1:6,19:27:56.78:329,57,0	0/1:8,7:14:7.43:57,0,7	0/0:13,0:18:29.22:0,29,183	0/0:11,0:18:40.40:0,40,233	0/1:11,10:20:11.90:84,0,12	0/0:11,1:17:24.58:0,25,212	0/1:6,7:14:4.15:35,0,4	0/0:22,1:25:26.70:0,27,309	0/0:10,0:14:23.17:0,23,131	0/1:26,5:29:6.20:6,0,373	0/0:13,0:19:46.24:0,46,265	0/1:16,4:20:5.67:72,0,6	1/1:8,14:25:26.73:152,27,0	1/1:9,4:16:23.65:124,24,0	0/0:12,0:16:37.31:0,37,206	0/0:14,0:24:54.66:0,55,297	0/0:13,0:18:20.22:0,20,120	0/0:11,0:13:14.32:0,14,75	0/1:14,8:22:17.75:87,0,18	0/1:9,8:18:11.59:46,0,12	0/1:8,6:14:5.51:76,0,6
chr10	91254679	.	AT	A	7399.24	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=10.022;DP=607;FS=2.715;HRun=3;HaplotypeScore=68.6177;InbreedingCoeff=0.9998;MQ=72.15;MQ0=2;MQRankSum=-2.402;QD=33.03;ReadPosRankSum=3.552;VQSLOD=5.4227;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.21:0,87,1190	0/0:13,0:13:39.13:0,39,561	0/0:11,0:11:33.10:0,33,447	0/0:10,0:10:30.10:0,30,429	0/0:32,0:32:96.22:0,96,1306	1/1:0,16:16:33.10:409,33,0	1/1:0,18:18:48.15:595,48,0	0/0:35,0:35:93.31:0,93,1323	0/0:26,0:26:75.25:0,75,1079	1/1:0,26:26:78.25:967,78,0	1/1:2,26:28:72.23:892,72,0	0/0:21,0:21:54.18:0,54,777	1/1:0,17:17:48.15:595,48,0	0/0:17,0:17:36.08:0,36,479	0/0:24,0:24:72.19:0,72,995	1/1:1,19:20:51.16:632,51,0	0/0:18,0:18:51.16:0,51,716	1/1:1,16:17:42.13:520,42,0	0/0:22,0:22:54.18:0,54,770	0/0:27,0:27:75.25:0,75,1079	0/0:24,0:24:72.24:0,72,1036	1/1:0,21:21:63.20:781,63,0	1/1:0,26:26:69.22:855,69,0	1/1:0,22:22:54.17:669,54,0	1/1:0,13:13:39.12:484,39,0	0/0:22,0:22:66.20:0,66,931	0/0:28,0:27:63.08:0,63,843	0/0:23,0:22:63.21:0,63,907
chr10	91254894	.	A	AACATACATACATACAT	34286.46	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=1.381;DP=757;FS=8.109;HRun=0;HaplotypeScore=266.8905;InbreedingCoeff=0.9388;MQ=64.78;MQ0=1;MQRankSum=-10.620;QD=57.05;ReadPosRankSum=-3.654;VQSLOD=2.5500;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:60.15:0,60,2059	0/0:12,0:12:21.02:0,21,572	0/0:32,0:32:23.11:0,23,540	0/0:28,0:28:30.07:0,30,704	1/1:24,15:41:21.54:1507,22,0	1/1:12,8:23:18.06:1345,18,0	1/1:28,0:28:33.07:1658,33,0	1/1:66,0:62:99:2836,99,0	1/1:22,8:33:33.11:2456,33,0	1/1:16,5:23:39.13:2259,39,0	1/1:10,9:24:6.02:432,6,0	1/1:13,21:36:30.10:2251,30,0	1/1:15,9:26:24.08:1569,24,0	1/1:17,10:28:30.10:2182,30,0	0/0:35,0:35:75.22:0,75,2721	1/1:22,13:35:42.14:3140,42,0	0/0:19,0:19:42.14:0,42,1733	1/1:11,0:11:14.91:161,15,0	1/1:13,0:13:14.87:472,15,0	1/1:8,12:25:24.97:1687,25,0	1/1:18,9:30:20.99:1080,21,0	1/1:13,8:23:15.05:1069,15,0	1/1:21,4:27:18.06:1246,18,0	1/1:9,9:19:9.03:682,9,0	1/1:16,9:26:24.08:1609,24,0	1/1:13,0:23:54.15:2749,54,0	1/1:16,7:27:21.07:1215,21,0	1/1:8,5:13:9.03:683,9,0
chr10	91258691	.	T	TA	3521.68	PASS	AC=42;AF=0.778;AN=54;BaseQRankSum=1.279;DP=286;FS=24.526;HRun=9;HaplotypeScore=40.6583;InbreedingCoeff=0.8396;MQ=73.76;MQ0=3;MQRankSum=-0.696;QD=17.01;ReadPosRankSum=-1.150;VQSLOD=1.8336;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:62.97:0,63,547	0/0:2,0:2:6:0,6,52	0/0:16,0:9:11.73:0,12,90	0/0:8,0:7:4.69:0,5,57	1/1:3,11:14:26.98:268,27,0	1/1:0,1:15:25.73:147,26,0	1/1:6,0:7:5.72:30,6,0	1/1:2,11:13:33.07:354,33,0	1/1:0,7:7:15.04:166,15,0	1/1:2,1:11:25.88:155,26,0	1/1:2,1:7:6.57:30,7,0	1/1:2,7:9:21.06:231,21,0	1/1:1,0:4:8.52:43,9,0	1/1:1,6:7:18.03:190,18,0	0/0:11,0:11:23.99:0,24,208	1/1:1,0:10:19.89:99,20,0	0/0:18,0:17:43.81:0,44,389	1/1:3,0:15:28.41:142,28,0	1/1:3,4:6:15.04:166,15,0	1/1:2,5:7:9.02:100,9,0	1/1:2,8:10:21.53:232,22,0	./.	1/1:2,1:5:5.85:47,6,0	1/1:1,0:7:11.36:57,11,0	1/1:5,1:14:22.89:132,23,0	1/1:2,10:12:30.06:321,30,0	1/1:2,10:12:32.12:338,32,0	1/1:2,8:10:26.99:275,27,0
chr10	91258956	.	C	CA	2684.07	PASS	AB=0.899;AC=32;AF=0.571;AN=56;BaseQRankSum=2.790;DP=518;FS=10.809;HRun=10;HaplotypeScore=100.4779;InbreedingCoeff=0.4144;MQ=43.65;MQ0=25;MQRankSum=-2.834;QD=8.08;ReadPosRankSum=-3.299;VQSLOD=0.7235;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,1:37:44.20:0,44,513	0/0:8,0:9:25.98:0,26,198	0/0:32,0:4:6.42:0,6,62	0/0:29,0:4:5.99:0,6,49	1/1:23,3:27:65.14:535,65,0	0/1:11,0:11:5.01:5,0,21	1/1:12,0:12:3.48:30,3,0	0/1:21,8:27:22.11:313,0,22	1/1:13,3:15:25.18:199,25,0	0/1:21,0:20:1:27,0,1	1/1:12,0:11:4.44:14,4,0	1/1:11,3:14:17.66:203,18,0	1/1:15,0:15:1.14:14,1,0	1/1:8,2:11:14.69:93,15,0	0/0:21,0:22:43.64:0,44,334	0/1:24,0:24:14.78:18,0,15	0/0:24,0:26:58.44:0,58,447	1/1:19,0:18:4.36:17,4,0	1/1:13,3:15:5.08:215,5,0	1/1:6,2:8:18.03:179,18,0	0/1:8,7:11:0.52:26,0,1	0/0:6,0:6:5.89:0,6,16	1/1:10,0:8:6.17:30,6,0	0/0:10,0:10:1.24:0,1,13	0/0:12,0:11:0.48:0,0,15	1/1:14,4:16:23.51:300,24,0	1/1:27,9:35:51.34:478,51,0	0/1:16,1:15:15.64:168,0,16
chr10	91258966	.	AC	A	2113.02	PASS	AB=0.964;AC=36;AF=0.643;AN=56;BaseQRankSum=8.103;DP=531;FS=2.048;HRun=1;HaplotypeScore=97.2997;InbreedingCoeff=0.3460;MQ=45.55;MQ0=27;MQRankSum=-6.423;QD=6.05;ReadPosRankSum=-0.269;VQSLOD=0.4395;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:61.41:0,61,679	0/0:9,0:9:22.64:0,23,233	0/0:50,0:7:6.08:0,6,48	0/0:37,0:5:0.74:0,1,37	1/1:26,0:26:35.56:156,36,0	0/1:9,6:13:4.50:121,0,5	1/1:6,2:8:23.15:155,23,0	0/1:34,0:32:48.69:49,0,73	0/1:14,0:13:2.36:39,0,2	1/1:19,4:22:45.38:288,45,0	1/1:3,6:8:8.44:46,8,0	1/1:14,0:14:8.48:68,8,0	1/1:15,1:16:12.68:107,13,0	1/1:7,0:7:12.63:59,13,0	0/0:20,0:20:24.32:0,24,394	1/1:18,4:22:41.35:310,41,0	0/0:29,0:29:39.13:0,39,552	1/1:13,1:13:13.99:131,14,0	0/1:15,0:13:20.16:20,0,39	0/1:7,0:8:6.60:7,0,31	1/1:14,0:11:4:26,4,0	1/1:2,2:4:8.88:70,9,0	1/1:6,4:8:14.02:82,14,0	1/1:9,3:11:10.59:88,11,0	1/1:6,7:12:28.41:207,28,0	0/1:23,0:20:64.11:71,0,64	0/1:36,0:36:3.33:160,0,3	0/1:11,0:11:7.04:36,0,7
chr10	91258967	.	C	CAA	1432.09	PASS	AB=0.895;AC=21;AF=0.375;AN=56;BaseQRankSum=2.181;DP=556;FS=1.036;HRun=12;HaplotypeScore=121.2846;InbreedingCoeff=0.5816;MQ=47.65;MQ0=29;MQRankSum=-6.590;QD=7.66;ReadPosRankSum=-5.356;VQSLOD=-0.0266;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:66.96:0,67,624	0/1:8,0:9:3.53:4,0,168	0/0:57,0:9:4.99:0,5,15	0/0:38,0:6:5.66:0,6,34	0/0:27,0:27:47.14:0,47,188	1/1:15,0:13:1.98:88,2,0	1/1:9,0:9:6.02:122,6,0	0/0:35,0:33:9.32:0,9,101	0/0:14,0:13:11.39:0,11,62	1/1:19,7:27:12.68:360,13,0	1/1:11,0:10:11.93:116,12,0	0/0:14,0:14:22.79:0,23,107	0/1:7,8:16:0.10:61,0,0	0/0:6,0:6:4.39:0,4,33	0/0:20,0:20:17.65:0,18,430	1/1:26,0:26:23.32:286,23,0	0/0:26,0:29:47.33:0,47,533	1/1:14,0:13:20.69:183,21,0	0/0:15,0:13:13.24:0,13,47	0/0:9,0:9:16.18:0,16,65	0/1:14,0:11:1.34:5,0,1	0/1:6,0:6:10.36:43,0,10	1/1:9,0:8:14.30:132,14,0	1/1:14,1:14:5.35:115,5,0	0/1:13,1:12:19.09:104,0,19	0/0:21,0:21:34.43:0,34,129	0/0:36,0:36:61.28:0,61,275	0/0:10,0:10:19.63:0,20,74
chr10	91258972	.	AAAAAAAAC	A	2393.54	PASS	AB=0.887;AC=19;AF=0.339;AN=56;BaseQRankSum=3.761;DP=564;FS=1.016;HRun=0;HaplotypeScore=161.5154;InbreedingCoeff=0.5883;MQ=50.84;MQ0=27;MQRankSum=-5.244;QD=11.62;ReadPosRankSum=-0.822;VQSLOD=2.8096;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:87.19:0,87,3157	0/0:9,0:9:27.09:0,27,1125	0/0:58,0:9:20.22:0,20,208	0/1:37,0:8:12.95:13,0,112	0/0:27,0:27:73.95:0,74,1604	0/1:10,6:14:44.58:225,0,45	1/1:9,1:10:8.99:170,9,0	0/0:39,0:37:36.57:0,37,1084	0/0:13,0:12:31.13:0,31,493	0/1:27,3:29:4.43:491,0,4	1/1:8,2:9:3.77:87,4,0	0/0:14,0:14:38.33:0,38,678	0/1:14,1:16:3.59:136,0,4	0/0:7,0:7:17.60:0,18,277	0/0:21,0:21:30.42:0,30,2222	1/1:21,4:25:11.01:407,11,0	0/0:29,0:29:81.28:0,81,2866	1/1:12,1:13:6.41:145,6,0	0/0:19,0:16:33.17:0,33,492	0/0:8,0:8:22.43:0,22,362	0/0:12,0:10:10.76:0,11,122	0/1:5,1:6:8.88:148,0,9	1/1:5,4:8:15.61:159,16,0	1/1:15,1:15:10.44:161,10,0	1/1:13,4:15:23.99:440,24,0	0/0:22,0:20:63.12:0,63,1061	0/0:35,0:35:91.19:0,91,1839	0/0:9,0:9:27.09:0,27,587
chr10	91258978	.	AAC	A	2501.16	PASS	AB=0.987;AC=32;AF=0.571;AN=56;BaseQRankSum=2.912;DP=558;FS=0.398;HRun=0;HaplotypeScore=113.1762;InbreedingCoeff=0.0739;MQ=54.62;MQ0=23;MQRankSum=2.472;QD=6.71;ReadPosRankSum=-1.256;VQSLOD=3.1871;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:78.24:0,78,1301	0/0:11,0:11:33.07:0,33,487	0/0:54,0:11:12.22:0,12,157	0/0:37,0:8:2.59:0,3,38	0/1:25,1:26:1.97:138,0,2	0/1:14,0:12:13.05:103,0,13	1/1:9,0:9:10.91:113,11,0	1/1:40,0:38:3.19:263,3,0	0/1:11,0:11:32.76:43,0,33	0/1:30,0:29:4.64:223,0,5	1/1:8,0:7:5.10:32,5,0	0/1:14,0:14:31.67:56,0,32	0/1:15,0:15:12.79:55,0,13	0/1:8,0:8:11.93:65,0,12	0/0:23,0:23:30.17:0,30,909	0/1:24,0:24:9.15:183,0,9	0/0:29,0:29:72.78:0,73,1162	1/1:11,0:11:13.44:89,13,0	0/1:19,0:17:9.78:164,0,10	0/1:8,0:8:27.20:44,0,27	1/1:12,1:12:19.14:158,19,0	1/1:8,0:8:11.45:120,11,0	1/1:9,0:8:2.08:39,2,0	1/1:16,0:16:9.97:98,10,0	1/1:16,0:14:32.60:255,33,0	0/1:23,2:23:7.17:200,0,7	0/1:39,0:39:69.84:207,0,70	1/1:9,0:9:5.84:29,6,0
chr10	91258979	.	AC	A	6226.49	PASS	AB=0.971;AC=45;AF=0.804;AN=56;BaseQRankSum=3.794;DP=529;FS=0.439;HRun=2;HaplotypeScore=89.6759;InbreedingCoeff=0.7885;MQ=55.86;MQ0=20;MQRankSum=-2.757;QD=16.21;ReadPosRankSum=-2.091;VQSLOD=4.2301;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:77.39:0,77,922	0/0:11,0:11:32.73:0,33,354	0/0:53,0:12:21.01:0,21,192	0/1:32,0:8:14.55:15,0,16	1/1:16,9:25:64.47:681,64,0	1/1:13,0:11:2.24:114,2,0	1/1:7,0:8:16.10:124,16,0	1/1:22,16:38:80.22:772,80,0	1/1:4,5:10:23.80:201,24,0	1/1:25,0:24:50.28:339,50,0	1/1:7,0:7:4.92:28,5,0	1/1:7,5:12:34.16:273,34,0	1/1:11,0:12:12.48:93,12,0	1/1:6,2:8:20.49:159,20,0	0/0:22,0:23:28.97:0,29,650	1/1:20,0:22:21.34:207,21,0	0/0:28,0:28:74.46:0,74,851	1/1:9,0:10:19.61:140,20,0	1/1:14,5:17:39.04:401,39,0	1/1:6,1:8:6.87:137,7,0	1/1:11,1:12:23.93:207,24,0	1/1:6,0:7:12.48:106,12,0	1/1:7,0:7:11.52:68,12,0	1/1:14,1:16:16.37:133,16,0	1/1:13,0:14:36.64:250,37,0	1/1:15,7:22:64.75:640,65,0	1/1:20,17:37:87.96:867,88,0	1/1:7,2:9:24.05:273,24,0
chr10	91259786	.	TA	T	820.42	PASS	AB=0.807;AC=16;AF=0.296;AN=54;BaseQRankSum=4.702;DP=218;FS=12.378;HRun=3;HaplotypeScore=60.0351;InbreedingCoeff=0.2328;MQ=48.02;MQ0=3;MQRankSum=-3.249;QD=7.97;ReadPosRankSum=3.066;VQSLOD=-0.3024;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:15.05:0,15,212	0/0:2,0:2:6.02:0,6,85	0/0:6,0:3:5.93:0,6,59	./.	0/1:2,1:3:23.08:48,0,23	0/0:13,0:13:10.66:0,11,40	0/0:4,0:4:7.41:0,7,31	0/1:24,5:29:99:159,0,268	0/1:7,5:12:3.53:177,0,4	0/0:7,0:7:9.86:0,10,31	0/0:4,0:4:6.26:0,6,23	0/1:4,1:5:17.48:17,0,26	0/0:4,0:4:4.82:0,5,18	1/1:2,4:6:14.04:123,14,0	0/0:8,0:8:18.06:0,18,255	0/1:10,0:9:0.23:0,0,1	0/0:31,0:31:93.30:0,93,1306	0/0:16,0:16:33.19:0,33,188	1/1:8,3:10:8.89:103,9,0	1/1:4,2:6:9.25:100,9,0	1/1:4,0:4:6.87:50,7,0	0/0:1,0:1:3:0,3,25	0/0:1,0:1:1.82:0,2,5	0/0:4,0:4:5.84:0,6,35	0/0:8,0:8:12.22:0,12,60	0/1:2,5:7:47.03:124,0,47	0/1:5,3:8:26.18:74,0,26	0/1:2,0:2:1.03:1,0,28
chr10	91259787	.	A	AATT	2295.65	PASS	AB=0.975;AC=27;AF=0.500;AN=54;BaseQRankSum=2.636;DP=212;FS=11.049;HRun=0;HaplotypeScore=64.7386;InbreedingCoeff=-0.0413;MQ=46.49;MQ0=3;MQRankSum=-3.981;QD=14.08;ReadPosRankSum=0.648;VQSLOD=2.2713;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:15.04:0,15,236	0/0:2,0:2:6.01:0,6,80	0/1:6,0:2:0.83:1,0,48	./.	0/1:2,1:3:8.05:58,0,8	0/1:13,0:13:47.34:52,0,47	0/1:4,0:4:12.55:13,0,13	1/1:28,1:29:36.27:773,36,0	1/1:9,2:11:15.07:415,15,0	0/1:7,0:7:6.07:47,0,6	0/1:4,0:4:3.77:4,0,20	0/1:3,0:3:8.96:40,0,9	0/1:4,0:4:4.16:4,0,14	1/1:5,0:5:14.88:125,15,0	0/0:8,0:8:18.06:0,18,313	0/1:9,0:8:15.61:60,0,16	0/0:31,0:31:93.30:0,93,1600	0/1:16,0:16:72.84:92,0,73	1/1:11,0:10:23.83:182,24,0	1/1:6,0:6:17.90:181,18,0	1/1:4,0:4:8.99:75,9,0	0/0:1,0:1:3:0,3,25	0/0:1,0:1:2.04:0,2,6	0/1:4,0:4:4.63:5,0,14	0/1:8,0:8:10.04:10,0,58	0/1:7,0:7:40.50:145,0,40	0/1:6,1:7:30.49:159,0,30	0/1:2,0:2:12.92:19,0,13
chr10	91259790	.	TA	T	2874.76	PASS	AB=1.000;AC=35;AF=0.673;AN=52;BaseQRankSum=6.009;DP=206;FS=3.739;HRun=3;HaplotypeScore=54.5240;InbreedingCoeff=0.3656;MQ=45.17;MQ0=3;MQRankSum=-6.067;QD=19.17;ReadPosRankSum=1.134;VQSLOD=3.3483;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:15.05:0,15,213	0/0:3,0:3:6.02:0,6,83	0/0:6,0:2:3.01:0,3,42	./.	0/1:3,0:3:8.50:48,0,8	1/1:3,10:13:36.10:423,36,0	1/1:2,2:4:12.04:141,12,0	0/1:26,0:26:99:155,0,310	1/1:12,0:12:13.44:188,13,0	1/1:1,6:7:21.07:260,21,0	1/1:2,2:4:12.03:132,12,0	0/1:4,0:4:10.37:19,0,10	1/1:2,2:4:12.03:139,12,0	1/1:5,0:5:13.57:116,14,0	0/0:7,0:7:21.07:0,21,288	1/1:2,7:8:24.07:292,24,0	0/0:30,0:30:90.30:0,90,1279	1/1:7,9:16:39.12:460,39,0	0/1:10,0:9:59.16:71,0,59	1/1:5,0:5:6.71:74,7,0	./.	1/1:1,0:1:3.01:31,3,0	1/1:1,0:1:2.97:20,3,0	1/1:1,2:3:3.01:37,3,0	1/1:2,6:8:21.06:239,21,0	1/1:8,0:8:9.62:141,10,0	0/1:7,0:7:11.53:56,0,12	0/0:2,0:2:0.41:0,0,12
chr10	91259794	.	TA	T	1501.96	PASS	AB=0.866;AC=27;AF=0.519;AN=52;BaseQRankSum=6.685;DP=205;FS=1.326;HRun=3;HaplotypeScore=60.3073;InbreedingCoeff=0.1521;MQ=40.17;MQ0=4;MQRankSum=-5.664;QD=10.58;ReadPosRankSum=-0.228;VQSLOD=1.2441;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:15.05:0,15,213	0/0:2,0:2:6.02:0,6,84	0/0:5,0:1:3.01:0,3,38	./.	0/1:3,0:3:3.43:47,0,3	1/1:11,3:14:2.15:193,2,0	0/1:2,2:4:9.48:58,0,9	0/1:28,0:28:99:162,0,202	1/1:11,0:11:15.63:177,16,0	0/0:7,0:7:4.79:0,5,10	0/1:3,2:5:0.35:89,0,0	0/1:4,0:4:16.60:17,0,23	0/1:2,2:4:1.06:59,0,1	1/1:6,0:6:14.71:116,15,0	0/0:7,0:7:18.06:0,18,254	1/1:9,1:9:7.60:74,8,0	0/0:30,0:30:87.26:0,87,1201	0/1:10,5:15:8.31:147,0,8	0/1:11,0:8:42.67:72,0,43	1/1:4,0:4:7.93:75,8,0	./.	1/1:0,1:1:3.01:32,3,0	1/1:0,1:1:2.88:15,3,0	0/0:3,0:3:2.50:0,2,9	1/1:5,2:7:0.93:127,1,0	1/1:8,0:8:2.34:133,2,0	0/1:6,0:6:3.12:61,0,3	0/0:2,0:2:1.54:0,2,9
chr10	91259803	.	AAATAAAT	A	3742.47	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=7.625;DP=212;FS=1.272;HRun=0;HaplotypeScore=79.3733;InbreedingCoeff=0.5889;MQ=42.02;MQ0=3;MQRankSum=-7.120;QD=23.54;ReadPosRankSum=-1.822;VQSLOD=2.8804;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:21.07:0,21,497	0/0:5,0:5:15.05:0,15,264	0/0:5,0:2:6.01:0,6,62	0/0:1,0:1:3.01:0,3,37	1/1:5,1:6:12.04:182,12,0	1/1:15,0:15:38.42:371,38,0	1/1:4,0:4:6.02:84,6,0	0/1:22,0:22:82.14:82,0,239	1/1:10,2:12:30.65:386,31,0	1/1:8,0:8:23.71:239,24,0	1/1:4,0:4:11.66:111,12,0	1/1:5,1:6:10.69:119,11,0	1/1:6,0:6:15:188,15,0	1/1:2,4:6:17.66:312,18,0	0/0:7,0:7:21.07:0,21,359	1/1:10,0:10:26.90:290,27,0	0/0:28,0:28:84.28:0,84,2324	0/1:14,0:14:7.42:218,0,7	1/1:6,3:6:12.66:224,13,0	1/1:1,1:2:3.01:71,3,0	1/1:2,0:2:3.01:39,3,0	1/1:1,0:1:3.01:42,3,0	1/1:2,0:2:3.90:44,4,0	1/1:4,0:4:9.03:127,9,0	1/1:7,0:7:17.46:144,17,0	1/1:6,3:9:13.66:268,14,0	1/1:5,2:7:14.60:146,15,0	1/1:3,0:3:6.89:58,7,0
chr10	91259807	.	AAAT	A	4549.35	PASS	AB=0.962;AC=42;AF=0.750;AN=56;BaseQRankSum=6.882;DP=224;FS=1.995;HRun=0;HaplotypeScore=63.8100;InbreedingCoeff=0.6101;MQ=43.39;MQ0=3;MQRankSum=-6.386;QD=26.76;ReadPosRankSum=-2.438;VQSLOD=3.7624;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:21.07:0,21,347	0/0:5,0:5:15.05:0,15,215	0/0:5,0:2:6.01:0,6,62	0/0:1,0:1:3.01:0,3,37	1/1:7,0:7:15.04:195,15,0	1/1:10,5:15:39.09:544,39,0	1/1:3,0:3:6.02:84,6,0	0/1:26,0:26:99:222,0,227	1/1:12,1:13:33.65:357,34,0	1/1:4,4:8:24.08:354,24,0	1/1:4,1:5:12.04:168,12,0	1/1:8,0:8:16.69:157,17,0	1/1:5,1:6:15.05:217,15,0	1/1:7,0:7:20.67:242,21,0	0/0:7,0:7:21.07:0,21,289	1/1:6,4:10:27.09:396,27,0	0/0:29,0:29:87.29:0,87,1538	0/1:11,1:12:6.74:326,0,7	1/1:10,0:7:14.52:164,15,0	1/1:1,0:1:3.01:43,3,0	1/1:2,0:2:3.01:39,3,0	1/1:1,0:1:3.01:42,3,0	1/1:2,0:2:6.01:67,6,0	1/1:3,0:3:9.03:127,9,0	1/1:5,3:8:21.07:300,21,0	1/1:9,1:10:16.67:226,17,0	1/1:10,0:10:23.61:222,24,0	1/1:3,0:3:6.89:58,7,0
chr10	91259810	.	T	TA	3940.29	PASS	AB=0.923;AC=43;AF=0.768;AN=56;BaseQRankSum=7.117;DP=224;FS=1.239;HRun=3;HaplotypeScore=56.0219;InbreedingCoeff=0.6601;MQ=44.54;MQ0=2;MQRankSum=-4.997;QD=23.18;ReadPosRankSum=-1.767;VQSLOD=2.6131;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:21.07:0,21,260	0/0:5,0:5:15.05:0,15,186	0/0:4,0:2:6.01:0,6,62	0/0:1,0:1:3.01:0,3,37	1/1:6,2:8:17.89:208,18,0	1/1:8,7:15:38.96:453,39,0	1/1:1,2:3:9.03:123,9,0	0/1:22,2:24:99:208,0,185	1/1:9,3:12:33.46:306,33,0	1/1:4,4:8:23.95:267,24,0	1/1:1,5:6:12.04:165,12,0	1/1:8,3:11:19.63:159,20,0	1/1:1,5:6:15.01:183,15,0	1/1:6,1:7:20.36:142,20,0	0/0:7,0:7:21.07:0,21,260	1/1:5,5:10:26.96:310,27,0	0/0:30,0:30:90.25:0,90,1093	1/1:5,7:12:1.24:335,1,0	1/1:10,0:7:17.56:111,18,0	1/1:2,0:2:5.87:40,6,0	1/1:0,2:2:3.01:38,3,0	1/1:0,1:1:3.01:41,3,0	1/1:0,2:2:6.02:81,6,0	1/1:0,3:3:9.03:122,9,0	1/1:5,3:8:21.03:270,21,0	1/1:8,0:8:16.26:143,16,0	1/1:6,3:9:20.60:178,21,0	1/1:1,2:3:7.25:58,7,0
chr10	91261260	.	C	CCATCCATCCATCCATCCATCCAT	49206.49	PASS	AB=0.727;AC=23;AF=0.411;AN=56;BaseQRankSum=12.495;DP=791;FS=0.309;HRun=0;HaplotypeScore=408.1596;InbreedingCoeff=-0.5060;MQ=60.12;MQ0=2;MQRankSum=-15.287;QD=79.37;ReadPosRankSum=9.909;VQSLOD=2.7112;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.65:0,88,3767	0/0:10,0:10:30.07:0,30,1099	0/0:45,0:33:86.21:0,86,1671	0/0:27,0:22:46.22:0,46,1099	0/1:17,2:34:99:1896,0,215	0/1:13,0:36:50.07:2859,0,50	0/1:9,0:20:99:359,0,138	0/1:51,0:49:99:3727,0,165	0/1:11,0:30:55.46:1503,0,55	0/1:16,0:35:99:1934,0,140	0/1:4,0:27:45.21:1453,0,45	0/1:13,0:27:0.66:2559,0,1	0/1:9,0:24:37.08:1802,0,37	0/1:13,0:24:99:1555,0,254	0/0:28,0:28:84.26:0,84,3966	0/1:10,0:33:28.38:2216,0,28	0/0:31,0:31:93.26:0,93,4120	0/1:12,0:12:38.51:704,0,39	0/1:20,0:20:98.20:2140,0,98	0/1:12,0:28:49.11:2804,0,49	0/1:14,0:14:24.81:895,0,25	0/1:10,0:32:99:1346,0,208	0/1:8,0:28:99:1737,0,122	0/1:4,0:14:27.73:579,0,28	0/1:20,0:29:99:2263,0,147	1/1:21,1:48:99:7253,125,0	0/1:36,0:36:99:6016,0,151	0/1:13,0:16:99:1607,0,215
chr10	91262045	.	C	CTCT	10649.95	PASS	AC=42;AF=0.808;AN=52;BaseQRankSum=-3.467;DP=617;FS=1.821;HRun=0;HaplotypeScore=58.1480;InbreedingCoeff=0.8478;MQ=39.82;MQ0=64;MQRankSum=-2.191;QD=24.26;ReadPosRankSum=-1.840;VQSLOD=4.2258;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:40:18.06:0,18,294	0/0:9,0:9:24.04:0,24,363	./.	0/0:13,0:3:5.99:0,6,53	1/1:3,17:22:26.98:500,27,0	1/1:12,6:15:15.01:264,15,0	1/1:2,23:15:6.02:122,6,0	1/1:4,11:5:9.03:201,9,0	1/1:0,14:13:15.05:334,15,0	1/1:8,11:16:42.14:900,42,0	1/1:2,23:25:48.04:917,48,0	1/1:5,25:21:12.04:248,12,0	1/1:7,16:16:14.93:334,15,0	1/1:1,21:18:14.91:333,15,0	0/0:26,0:21:18:0,18,294	1/1:2,15:11:11.90:267,12,0	0/0:38,0:33:6:0,6,73	1/1:3,27:18:15.05:332,15,0	1/1:3,12:9:24.08:513,24,0	1/1:0,15:16:33.07:659,33,0	./.	1/1:6,17:23:35.99:639,36,0	1/1:2,20:21:44.99:896,45,0	1/1:5,17:14:6.02:132,6,0	1/1:4,17:21:54.55:1108,55,0	1/1:3,23:21:54.18:1147,54,0	1/1:1,24:18:21.07:466,21,0	1/1:1,6:6:15.05:335,15,0
chr10	91262102	.	A	AT	3013.82	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-2.708;DP=530;FS=4.150;HRun=5;HaplotypeScore=46.8790;InbreedingCoeff=0.8857;MQ=47.19;MQ0=42;MQRankSum=0.952;QD=13.64;ReadPosRankSum=0.995;VQSLOD=1.8325;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:37:36.09:0,36,386	0/0:6,0:6:18:0,18,181	0/0:17,0:2:2.04:0,2,6	0/1:22,0:4:1.61:2,0,54	0/0:18,0:18:30.06:0,30,313	1/1:1,17:15:15.05:197,15,0	1/1:7,18:20:18.06:236,18,0	0/0:31,0:23:60.13:0,60,635	0/0:17,0:16:15.03:0,15,157	1/1:2,18:20:45.15:591,45,0	1/1:1,8:9:24.08:315,24,0	0/0:21,0:16:18.05:0,18,193	1/1:5,15:15:11.74:154,12,0	0/0:16,0:15:8.75:0,9,95	0/0:19,0:15:18.05:0,18,193	1/1:6,13:15:21.03:258,21,0	0/0:34,0:29:29.97:0,30,306	1/1:6,21:18:21.05:260,21,0	0/0:10,0:7:18:0,18,181	0/0:11,0:11:30.08:0,30,322	0/0:20,0:15:18.04:0,18,193	1/1:0,13:13:24.08:316,24,0	1/1:2,9:10:21.07:270,21,0	1/1:3,19:16:12.04:158,12,0	1/1:2,13:15:36.12:473,36,0	0/0:18,0:16:36.17:0,36,413	0/0:25,0:17:23.13:0,23,199	0/0:4,0:3:5.97:0,6,52
chr10	91262545	.	GT	G	4081.20	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-2.819;DP=541;FS=32.125;HRun=10;HaplotypeScore=107.9473;InbreedingCoeff=0.9794;MQ=63.40;MQ0=3;MQRankSum=-0.825;QD=20.01;ReadPosRankSum=1.414;VQSLOD=2.2821;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,1166	0/0:8,0:8:21.06:0,21,232	0/0:27,0:13:16.85:0,17,166	0/0:22,0:10:23.16:0,23,187	1/1:5,12:17:26.95:234,27,0	0/0:5,0:23:57.66:0,58,324	0/0:3,0:17:42.34:0,42,207	1/1:0,20:20:56.98:494,57,0	1/1:3,8:11:23.98:208,24,0	0/0:11,0:28:57.88:0,58,300	0/0:3,0:12:34.05:0,34,176	1/1:6,14:20:53.99:468,54,0	0/0:3,0:10:19.89:0,20,100	1/1:4,10:14:35.99:312,36,0	0/0:18,0:20:44.90:0,45,457	0/0:6,0:25:57.60:0,58,286	0/0:28,0:28:54.69:0,55,642	0/0:7,0:17:38.14:0,38,227	1/1:7,16:22:53.97:468,54,0	1/1:7,19:24:28.83:418,29,0	1/1:0,4:4:5.99:52,6,0	0/0:3,0:11:23.06:0,23,129	0/0:3,0:10:22.71:0,23,116	0/0:9,0:16:20.24:0,20,105	0/0:6,0:19:43.11:0,43,247	1/1:5,10:16:24.76:291,25,0	1/1:8,26:34:74.95:647,75,0	1/1:3,16:19:56.95:488,57,0
chr10	91262566	.	CTTT	C	4172.15	PASS	AB=0.637;AC=25;AF=0.446;AN=56;BaseQRankSum=0.029;DP=569;FS=5.196;HRun=13;HaplotypeScore=123.6379;InbreedingCoeff=0.6619;MQ=49.31;MQ0=6;MQRankSum=-3.010;QD=15.28;ReadPosRankSum=-1.275;VQSLOD=2.0461;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:42:99:0,105,1695	0/0:9,0:10:15.01:0,15,209	0/0:34,0:8:6.22:0,6,108	0/0:34,0:12:6.15:0,6,28	1/1:7,13:20:35.86:381,36,0	0/0:9,0:21:1.95:0,2,65	0/0:4,0:12:13.77:0,14,40	1/1:12,12:23:39.05:451,39,0	1/1:5,8:13:15:182,15,0	0/1:12,2:26:35.12:35,0,99	0/0:4,0:11:10.76:0,11,47	1/1:8,12:20:29.51:322,30,0	0/1:8,0:20:17.69:18,0,50	1/1:5,6:11:14.85:149,15,0	0/0:21,0:20:44.52:0,45,641	0/0:8,0:23:25.06:0,25,85	0/0:32,0:32:78.66:0,79,1273	0/1:9,1:20:44.46:50,0,44	1/1:8,13:22:44.79:452,45,0	1/1:14,9:21:38.84:408,39,0	1/1:3,1:4:5.98:61,6,0	0/0:6,0:10:8.40:0,8,27	0/0:4,0:8:6.68:0,7,27	0/0:8,0:12:6.54:0,7,16	0/0:6,0:18:12.38:0,12,48	1/1:5,16:22:46.66:557,47,0	1/1:7,23:31:69.10:813,69,0	1/1:7,8:15:24.91:293,25,0
chr10	91262578	.	TTC	T	1002.84	PASS	AB=0.977;AC=13;AF=0.232;AN=56;BaseQRankSum=3.124;DP=525;FS=19.747;HRun=0;HaplotypeScore=118.9502;InbreedingCoeff=-0.0960;MQ=50.12;MQ0=5;MQRankSum=-7.997;QD=5.06;ReadPosRankSum=5.318;VQSLOD=1.4172;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:82.86:0,83,1188	0/0:6,0:6:17.94:0,18,217	0/0:30,0:6:11.42:0,11,103	0/0:35,0:9:11.11:0,11,54	0/0:21,0:21:27.27:0,27,165	0/1:17,1:18:25.49:145,0,25	0/1:12,0:12:22.87:99,0,23	0/0:21,0:20:36.08:0,36,181	0/0:12,0:12:8.96:0,9,59	0/1:24,1:25:99:146,0,156	0/1:12,1:12:50.07:73,0,50	0/0:19,0:19:10.16:0,10,110	0/1:20,0:19:44.67:109,0,45	0/0:11,0:11:15.76:0,16,126	0/0:19,0:18:37.76:0,38,444	1/1:18,3:20:44.55:270,45,0	0/0:31,0:31:68.20:0,68,958	0/1:17,1:17:24.40:88,0,24	0/0:21,0:20:42.68:0,43,221	0/0:17,0:15:21.18:0,21,136	0/0:5,0:5:9.42:0,9,69	0/1:8,0:8:33.41:49,0,33	0/1:7,0:6:6.69:26,0,7	0/1:9,0:9:18.44:32,0,18	0/1:22,0:19:87.03:96,0,87	0/1:24,1:25:28.52:29,0,189	0/0:29,0:29:11.46:0,11,66	0/0:10,0:10:13.14:0,13,47
chr10	91263126	.	CCGCT	C	5907.30	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=0.806;DP=518;FS=3.043;HRun=0;HaplotypeScore=117.8948;InbreedingCoeff=0.9775;MQ=82.10;MQ0=2;MQRankSum=-2.888;QD=34.55;ReadPosRankSum=3.397;VQSLOD=4.8471;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.25:0,96,2251	0/0:13,0:13:33.10:0,33,739	0/0:29,0:24:46.94:0,47,761	0/0:22,0:17:41.90:0,42,628	0/0:17,0:17:48.14:0,48,974	1/1:0,24:24:54.19:989,54,0	1/1:4,11:15:30.10:504,30,0	0/0:21,0:21:48:0,48,840	0/0:17,0:17:39.10:0,39,836	1/1:5,14:19:45.07:671,45,0	1/1:0,5:5:9.03:145,9,0	0/0:15,0:15:33.10:0,33,704	1/1:1,10:11:20.72:384,21,0	0/0:18,0:18:38.87:0,39,611	0/0:19,0:19:54.13:0,54,1329	1/1:3,25:28:63.22:1135,63,0	0/0:33,0:33:90.27:0,90,2167	1/1:0,16:16:36.12:662,36,0	0/0:25,0:25:54.17:0,54,1179	0/0:10,0:10:30.10:0,30,684	0/0:24,0:24:45.15:0,45,1068	1/1:2,13:15:36.12:613,36,0	1/1:1,11:12:9:148,9,0	1/1:1,16:17:24.08:436,24,0	1/1:0,9:9:12.04:221,12,0	0/0:13,0:13:39.08:0,39,818	0/0:19,0:18:33.11:0,33,761	0/0:20,0:20:45:0,45,933
chr10	91263130	.	TCG	T	2101.97	PASS	AB=0.842;AC=21;AF=0.375;AN=56;BaseQRankSum=10.880;DP=508;FS=3.638;HRun=0;HaplotypeScore=112.6257;InbreedingCoeff=0.9109;MQ=81.64;MQ0=2;MQRankSum=-2.789;QD=12.59;ReadPosRankSum=3.713;VQSLOD=3.0877;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.22:0,96,1632	0/0:14,0:14:39.04:0,39,583	0/0:27,0:22:48.91:0,49,585	0/0:25,0:19:8.07:0,8,363	0/0:18,0:18:51.13:0,51,671	1/1:24,0:24:52.84:344,53,0	0/1:13,3:16:4.15:234,0,4	0/0:20,0:20:54:0,54,640	0/0:16,0:16:41.47:0,41,569	1/1:14,1:15:44.59:350,45,0	1/1:5,0:5:8.71:50,9,0	0/0:15,0:15:33.03:0,33,458	1/1:10,0:10:20.55:136,21,0	0/0:18,0:18:41.38:0,41,451	0/0:18,0:18:54.13:0,54,955	1/1:25,2:27:61.80:431,62,0	0/0:34,0:34:95.68:0,96,1633	1/1:16,0:16:35.15:209,35,0	0/0:21,0:21:54.12:0,54,747	0/0:11,0:11:32.14:0,32,445	0/0:21,0:21:45.15:0,45,693	1/1:16,0:16:35.26:252,35,0	1/1:11,1:12:8.78:72,9,0	1/1:17,0:17:23.51:170,24,0	1/1:9,0:9:11.70:70,12,0	0/0:13,0:13:39.01:0,39,545	0/0:18,0:17:36.11:0,36,512	0/0:20,0:20:44.93:0,45,611
chr10	91263144	.	T	TC	4949.97	PASS	AB=0.893;AC=23;AF=0.411;AN=56;BaseQRankSum=-7.589;DP=525;FS=1.247;HRun=1;HaplotypeScore=100.2568;InbreedingCoeff=0.7904;MQ=70.69;MQ0=3;MQRankSum=1.946;QD=21.06;ReadPosRankSum=0.910;VQSLOD=5.0060;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:92.99:0,93,1140	0/0:12,0:12:33.09:0,33,424	0/1:22,0:17:18.20:18,0,243	0/1:19,0:12:5.81:6,0,144	1/1:2,17:19:43.77:494,44,0	0/0:22,0:22:62.96:0,63,697	0/0:20,0:20:41.85:0,42,515	1/1:0,16:16:41.94:420,42,0	1/1:0,17:17:39.11:514,39,0	0/0:19,0:19:45.38:0,45,483	0/0:5,0:5:9.02:0,9,96	1/1:2,18:20:24.18:360,24,0	0/0:13,0:13:33.01:0,33,329	1/1:1,16:17:26.14:364,26,0	0/0:22,0:22:37.17:0,37,687	0/0:29,0:29:64.36:0,64,689	0/0:38,0:38:99:0,111,1345	0/0:16,1:16:39.12:0,39,462	1/1:3,15:18:48.06:556,48,0	1/1:2,14:16:27.90:379,28,0	1/1:1,17:18:42.13:572,42,0	0/0:14,0:14:29.84:0,30,284	0/0:11,0:11:9.39:0,9,86	0/0:22,0:22:38.78:0,39,390	0/0:11,0:11:21.06:0,21,237	0/1:9,8:16:7.03:347,0,7	1/1:3,18:20:36.07:473,36,0	1/1:1,14:15:32.52:447,33,0
chr10	91264961	.	GT	G	19977.65	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=10.911;DP=691;FS=0.664;HRun=1;HaplotypeScore=71.1244;InbreedingCoeff=0.9995;MQ=85.90;MQ0=0;MQRankSum=-3.985;QD=38.64;ReadPosRankSum=0.849;VQSLOD=5.3985;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,187,2932	0/0:10,0:10:30.10:0,30,463	0/0:23,0:23:66.15:0,66,954	0/0:22,0:23:57.10:0,57,867	1/1:0,20:20:57.19:797,57,0	1/1:0,22:22:57.19:797,57,0	1/1:0,22:22:57.19:797,57,0	1/1:0,22:22:66.22:923,66,0	1/1:0,23:23:60.20:838,60,0	1/1:0,27:27:81.27:1132,81,0	1/1:0,22:22:57.19:797,57,0	1/1:0,17:17:42.14:587,42,0	1/1:0,25:25:69.23:965,69,0	1/1:0,17:17:48.16:671,48,0	0/0:25,0:25:75.26:0,75,1199	1/1:0,33:33:96.32:1343,96,0	0/0:31,0:31:93.29:0,93,1445	1/1:0,23:23:63.21:881,63,0	1/1:0,30:30:90.30:1253,90,0	1/1:0,19:19:48.16:665,48,0	1/1:0,41:41:99:1511,108,0	1/1:0,23:23:63.21:881,63,0	1/1:0,21:21:54.18:755,54,0	1/1:0,28:28:84.28:1175,84,0	1/1:0,19:19:51.17:713,51,0	1/1:0,24:24:69.21:944,69,0	1/1:0,30:30:87.29:1217,87,0	1/1:0,9:9:24.08:335,24,0
chr10	91266341	.	GA	G	2524.80	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=-4.518;DP=575;FS=3.744;HRun=12;HaplotypeScore=73.1043;InbreedingCoeff=0.7886;MQ=60.04;MQ0=14;MQRankSum=2.560;QD=10.48;ReadPosRankSum=-0.831;VQSLOD=3.0512;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:25:26.83:0,27,459	0/0:14,0:14:28.16:0,28,246	0/1:10,0:6:13.83:14,0,91	0/0:9,0:8:3.74:0,4,87	1/1:4,13:17:29.82:228,30,0	0/0:4,0:14:14.33:0,14,77	0/0:10,0:31:42.92:0,43,236	1/1:19,7:23:44.01:330,44,0	1/1:8,14:22:20.87:162,21,0	0/0:8,0:24:45.74:0,46,263	0/0:11,0:12:14.18:0,14,85	1/1:11,21:31:50.64:388,51,0	0/0:7,0:20:19.79:0,20,98	1/1:5,16:21:7.78:232,8,0	0/0:22,0:22:52.24:0,52,496	0/0:1,0:17:28.53:0,29,149	0/0:36,0:41:92.93:0,93,855	0/0:9,0:31:20.15:0,20,114	1/1:11,19:28:23.24:357,23,0	1/1:5,9:14:26.88:207,27,0	1/1:4,17:20:29.88:232,30,0	0/0:8,0:13:13.36:0,13,66	0/0:5,0:16:18.59:0,19,86	0/0:3,0:18:25.57:0,26,129	0/0:4,0:15:23.47:0,23,131	1/1:5,16:20:19.44:327,19,0	1/1:5,14:19:4.97:223,5,0	0/1:6,0:4:21.38:37,0,21
chr10	91269260	.	AGC	A	11168.10	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=18.133;DP=734;FS=7.717;HRun=0;HaplotypeScore=134.0383;InbreedingCoeff=0.9995;MQ=87.91;MQ0=0;MQRankSum=-3.391;QD=40.76;ReadPosRankSum=5.684;VQSLOD=5.7954;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,2637	0/0:10,0:10:30.10:0,30,607	0/0:25,0:25:54.58:0,55,1281	0/0:28,0:28:74.70:0,75,1350	0/0:15,0:15:42.10:0,42,713	1/1:0,26:26:63.22:1027,63,0	1/1:0,29:29:81.28:1319,81,0	0/0:37,0:37:99:0,111,2199	0/0:21,0:21:63.22:0,63,1278	1/1:0,23:23:66.23:1076,66,0	1/1:0,19:19:42.10:656,42,0	0/0:32,0:32:96.33:0,96,1947	1/1:0,33:33:87.29:1418,87,0	0/0:27,0:27:81.28:0,81,1646	0/0:33,0:33:99:0,99,2006	1/1:0,33:33:81.28:1319,81,0	0/0:37,0:37:99:0,111,2238	1/1:0,12:12:27.09:440,27,0	0/0:24,0:24:72.22:0,72,1383	0/0:23,0:23:63.18:0,63,1162	0/0:42,0:42:99:0,120,2330	1/1:0,26:26:66.23:1075,66,0	1/1:0,14:14:30.10:489,30,0	1/1:0,33:33:72.25:1174,72,0	1/1:0,26:26:72.25:1174,72,0	0/0:25,1:26:26.29:0,26,1280	0/0:20,0:19:60.21:0,60,1194	0/0:15,0:15:45.15:0,45,914
chr10	91269966	.	TACACACAC	T	1598.76	PASS	AB=0.893;AC=28;AF=0.583;AN=48;BaseQRankSum=1.432;DP=581;FS=22.526;HRun=0;HaplotypeScore=136.7685;InbreedingCoeff=0.1297;MQ=62.42;MQ0=10;MQRankSum=-2.860;QD=4.49;ReadPosRankSum=4.243;VQSLOD=1.0972;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:29.60:0,30,906	0/0:4,0:4:3.48:0,3,47	./.	./.	1/1:7,0:10:0.47:1,0,0	0/1:10,0:10:13.16:82,0,13	0/1:15,11:25:0.06:0,0,0	0/0:24,0:24:1.82:0,2,5	0/1:23,2:24:10.36:188,0,10	1/1:15,0:15:6.01:86,6,0	./.	1/1:18,1:21:23.35:394,23,0	0/0:16,0:16:7.03:0,7,28	0/1:13,8:21:40.52:66,0,41	0/0:16,0:16:15.05:0,15,379	0/1:14,1:19:29.05:225,0,29	0/0:30,0:29:40.34:0,40,1140	0/1:28,0:28:51.59:95,0,52	1/1:16,1:18:8.77:141,9,0	1/1:10,0:10:3:25,3,0	0/1:60,0:60:17.28:76,0,17	1/1:7,2:9:2.87:74,3,0	./.	1/1:26,0:27:8.35:98,8,0	1/1:7,0:7:2.96:19,3,0	0/1:21,0:21:21.51:72,0,22	1/1:16,0:17:5.80:32,6,0	1/1:5,6:11:3.01:74,3,0
chr10	91270417	.	GGGGGGA	G	566.01	PASS	AB=1.000;AC=22;AF=0.423;AN=52;BaseQRankSum=2.637;DP=242;FS=4.659;HRun=0;HaplotypeScore=66.3052;InbreedingCoeff=0.5463;MQ=81.71;MQ0=2;MQRankSum=-0.503;QD=5.29;ReadPosRankSum=-5.297;VQSLOD=-0.0955;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:12.45:0,12,279	0/0:2,0:2:6.02:0,6,166	0/0:22,0:15:26.50:0,27,358	0/0:18,0:12:14.27:0,14,196	1/1:2,0:2:3:25,3,0	0/0:7,0:7:3.08:0,3,161	0/0:14,0:14:22.76:0,23,226	1/1:6,0:6:2.02:75,2,0	1/1:7,2:9:15.98:189,16,0	0/0:2,0:2:3.01:0,3,39	./.	1/1:15,0:15:0.44:1,0,0	0/0:9,0:9:21.03:0,21,367	1/1:13,0:13:17.72:154,18,0	0/0:8,0:8:16.30:0,16,409	0/0:7,0:7:10.75:0,11,162	0/0:23,0:23:62.82:0,63,1461	0/1:9,0:8:2.86:3,0,288	0/1:7,0:7:8.76:44,0,9	1/1:1,0:1:0.89:2,1,0	1/1:28,2:30:19.77:135,20,0	0/0:2,0:2:0.07:0,0,59	./.	0/0:8,0:8:10.39:0,10,159	0/0:2,0:2:3:0,3,27	1/1:5,0:5:5.20:22,5,0	1/1:9,0:9:8.79:58,9,0	1/1:1,0:1:2.98:22,3,0
chr10	91270418	.	GGGGGA	G	852.09	PASS	AB=1.000;AC=22;AF=0.440;AN=50;BaseQRankSum=1.343;DP=231;FS=5.049;HRun=0;HaplotypeScore=59.2792;InbreedingCoeff=0.5226;MQ=82.41;MQ0=2;MQRankSum=-0.959;QD=7.10;ReadPosRankSum=-5.568;VQSLOD=-0.5244;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:12.45:0,12,239	0/0:2,0:2:6.02:0,6,140	0/0:21,0:14:21.82:0,22,318	0/0:18,0:12:12.23:0,12,177	1/1:2,0:2:3:25,3,0	0/1:7,0:7:3:3,0,67	0/1:13,0:13:11.13:11,0,80	1/1:6,0:6:14.82:104,15,0	1/1:6,2:8:18.85:200,19,0	0/0:2,0:2:3:0,3,25	./.	0/1:15,0:15:0:0,0,0	0/0:9,0:9:18.48:0,18,257	1/1:13,0:13:29.82:240,30,0	0/0:8,0:8:16.30:0,16,339	0/0:7,0:7:2.43:0,2,96	0/0:23,0:23:62.78:0,63,1196	0/1:9,0:8:8.23:8,0,206	1/1:6,0:6:8.93:72,9,0	1/1:1,0:1:2.74:12,3,0	1/1:26,2:28:26.86:222,27,0	0/0:2,0:2:0.06:0,0,44	./.	0/0:7,0:7:9.03:0,9,113	0/0:1,0:1:2.37:0,2,8	1/1:3,0:3:5.37:35,5,0	1/1:9,0:9:12.17:86,12,0	./.
chr10	91270421	.	GGA	G	1549.88	PASS	AB=0.759;AC=38;AF=0.731;AN=52;BaseQRankSum=2.128;DP=225;FS=2.752;HRun=0;HaplotypeScore=45.4014;InbreedingCoeff=0.6278;MQ=81.40;MQ0=2;MQRankSum=-1.891;QD=10.69;ReadPosRankSum=-3.524;VQSLOD=2.5221;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:11.62:0,12,133	0/0:2,0:2:6.02:0,6,67	0/0:18,1:12:5.87:0,6,141	0/0:18,0:12:7:0,7,89	1/1:2,0:2:3:25,3,0	1/1:7,0:7:15.67:105,16,0	1/1:13,0:13:28.30:188,28,0	1/1:8,0:8:20.86:156,21,0	1/1:8,0:8:20.84:151,21,0	1/1:2,0:2:2.99:23,3,0	./.	0/1:1,14:15:0:0,0,0	1/1:9,0:9:10.28:51,10,0	1/1:12,0:12:29.79:224,30,0	0/0:8,0:8:13.09:0,13,162	1/1:7,0:7:12.59:79,13,0	0/0:23,0:23:49.62:0,50,540	1/1:9,0:8:11.59:67,12,0	0/1:7,0:7:2.12:96,0,2	1/1:1,0:1:3:26,3,0	1/1:26,0:26:34.05:274,34,0	1/1:2,0:2:2.70:7,3,0	./.	1/1:6,0:6:8.40:39,8,0	1/1:1,0:1:2.96:19,3,0	1/1:3,0:3:8.49:60,8,0	1/1:6,0:6:14.94:119,15,0	1/1:1,0:1:0.47:1,0,0
chr10	91270422	.	GA	G	1792.26	PASS	AB=0.715;AC=38;AF=0.731;AN=52;BaseQRankSum=2.574;DP=220;FS=0.000;HRun=1;HaplotypeScore=40.7222;InbreedingCoeff=0.5734;MQ=83.93;MQ0=1;MQRankSum=-2.149;QD=11.95;ReadPosRankSum=-2.028;VQSLOD=1.1386;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:11.76:0,12,97	0/0:2,0:2:5.96:0,6,45	0/0:20,0:13:15:0,15,128	0/0:17,0:12:6.92:0,7,84	1/1:1,0:1:3:25,3,0	1/1:7,0:7:17.75:124,18,0	1/1:12,1:13:32.67:240,33,0	1/1:0,8:8:18.64:153,19,0	1/1:8,0:8:20.56:134,21,0	1/1:2,0:2:2.99:23,3,0	./.	0/0:14,0:14:0:0,0,0	1/1:8,0:8:14.95:80,15,0	1/1:12,0:12:29.69:219,30,0	0/0:7,1:8:12.70:0,13,121	1/1:7,0:7:14.50:114,14,0	0/1:20,3:23:6.23:6,0,369	1/1:9,0:8:18.76:124,19,0	0/1:1,5:6:3.10:95,0,3	1/1:1,0:1:3:26,3,0	1/1:26,0:26:33.35:273,33,0	1/1:2,0:2:3.85:11,4,0	./.	1/1:6,0:6:11.99:103,12,0	1/1:1,0:1:2.96:19,3,0	1/1:3,0:3:8.49:61,8,0	1/1:6,0:6:14.94:119,15,0	1/1:1,0:1:0.47:1,0,0
chr10	91277434	.	G	GA	5853.92	PASS	AB=0.769;AC=55;AF=0.982;AN=56;BaseQRankSum=-1.185;DP=661;FS=9.603;HRun=1;HaplotypeScore=156.0849;InbreedingCoeff=-0.0218;MQ=82.07;MQ0=0;MQRankSum=2.689;QD=8.86;ReadPosRankSum=2.433;VQSLOD=1.8482;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:39:89.73:379,90,0	1/1:14,0:14:21.94:106,22,0	1/1:17,7:24:26.28:367,26,0	0/1:14,6:19:25.26:152,0,25	1/1:15,0:15:31.11:103,31,0	1/1:17,0:17:34.54:136,35,0	1/1:27,0:27:68.66:272,69,0	1/1:23,0:23:58.01:292,58,0	1/1:31,0:31:74.51:287,75,0	1/1:22,0:22:11.18:165,11,0	1/1:8,0:8:17.82:61,18,0	1/1:24,0:24:58.68:213,59,0	1/1:21,0:21:27.29:178,27,0	1/1:32,0:32:61.14:224,61,0	1/1:26,0:26:47.68:199,48,0	1/1:31,0:31:74.81:323,75,0	1/1:39,0:39:78.07:308,78,0	1/1:30,0:30:74.34:276,74,0	1/1:19,0:19:24.24:159,24,0	1/1:13,0:13:18.98:75,19,0	1/1:44,0:44:99:368,103,0	1/1:15,0:15:22.07:87,22,0	1/1:10,0:10:10.93:49,11,0	1/1:31,0:31:73.53:253,74,0	1/1:19,0:19:40.61:180,41,0	1/1:23,0:23:52.08:286,52,0	1/1:30,0:30:47.96:210,48,0	1/1:14,0:14:34.69:145,35,0
chr10	91278087	.	C	CTAAGGCTATACATTACAGAGAGAGGA	33533.49	PASS	AB=0.748;AC=54;AF=0.964;AN=56;BaseQRankSum=0.015;DP=241;FS=31.065;HRun=0;HaplotypeScore=268.1041;InbreedingCoeff=-0.0511;MQ=71.11;MQ0=0;MQRankSum=-2.655;QD=139.14;ReadPosRankSum=2.053;VQSLOD=3.3837;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:24.04:1003,24,0	1/1:4,0:4:11.98:254,12,0	0/1:7,1:10:16.15:1151,0,16	0/1:5,0:8:38.42:961,0,38	1/1:12,0:12:27.01:1725,27,0	1/1:11,0:11:27.09:1891,27,0	1/1:8,0:8:21.07:1238,21,0	1/1:11,0:11:27.07:1156,27,0	1/1:15,0:15:39.13:2517,39,0	1/1:12,0:12:30.10:2202,30,0	1/1:8,0:8:21.03:968,21,0	1/1:18,0:18:48.04:1960,48,0	1/1:9,0:9:21.04:1086,21,0	1/1:7,0:7:17.83:1221,18,0	1/1:13,0:13:32.63:1294,33,0	1/1:10,0:10:27.09:1818,27,0	1/1:9,0:9:18.06:1626,18,0	1/1:5,0:5:15.05:1151,15,0	1/1:10,0:10:27.09:1433,27,0	1/1:5,0:5:15.01:664,15,0	1/1:6,0:6:14.88:264,15,0	1/1:6,0:6:17.76:457,18,0	1/1:6,0:6:18:1137,18,0	1/1:4,0:4:6.02:487,6,0	1/1:6,0:6:12:941,12,0	1/1:11,0:11:30.09:2234,30,0	1/1:5,0:5:15.05:613,15,0	1/1:2,0:2:5.99:81,6,0
chr10	91278088	.	T	TAAGGCTATACATTACAGAGAGAAA	2143.39	PASS	AB=0.631;AC=26;AF=0.929;AN=28;BaseQRankSum=-2.685;DP=38;FS=6.495;HRun=0;HaplotypeScore=29.8024;InbreedingCoeff=-0.2277;MQ=131.61;MQ0=0;MQRankSum=-1.898;QD=66.98;ReadPosRankSum=0.895;VQSLOD=1.2319;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:3.01:52,3,0	1/1:3,0:3:9.02:234,9,0	0/1:3,1:7:25.09:764,0,25	0/1:2,0:5:47.45:478,0,47	./.	./.	./.	1/1:3,0:3:6:53,6,0	./.	1/1:1,0:1:3.01:55,3,0	./.	./.	1/1:1,0:1:3.01:52,3,0	1/1:1,0:1:2.99:24,3,0	./.	./.	./.	./.	1/1:2,0:2:6.02:195,6,0	1/1:1,0:1:3.01:53,3,0	./.	1/1:2,0:2:6.02:110,6,0	1/1:1,0:1:3:25,3,0	./.	./.	1/1:1,0:1:2.99:24,3,0	1/1:2,0:2:6.02:114,6,0	./.
chr10	91328114	.	A	AT	962.97	PASS	AB=0.981;AC=24;AF=0.444;AN=54;BaseQRankSum=-1.503;DP=453;FS=4.707;HRun=11;HaplotypeScore=28.2293;InbreedingCoeff=0.6619;MQ=37.37;MQ0=112;MQRankSum=1.037;QD=4.24;ReadPosRankSum=-1.595;VQSLOD=-0.5612;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:14.52:0,15,89	0/0:5,0:2:5.88:0,6,36	0/1:42,0:6:0.83:1,0,22	0/0:69,0:13:15.99:0,16,92	1/1:16,0:13:17.01:122,17,0	0/0:8,0:8:9.15:0,9,40	0/0:4,0:3:7.70:0,8,41	1/1:13,0:12:11.26:162,11,0	1/1:10,0:6:8.83:53,9,0	0/0:12,0:8:13.98:0,14,79	0/0:13,0:12:13.25:0,13,81	1/1:15,0:9:8.84:55,9,0	0/0:8,0:4:2.94:0,3,18	1/1:8,0:2:2.96:19,3,0	1/1:11,0:4:0.47:1,0,0	0/0:8,0:5:3.63:0,4,14	0/0:26,0:19:16.89:0,17,117	0/0:17,0:12:8.73:0,9,52	0/1:24,1:9:6.14:53,0,6	1/1:14,0:11:14.85:109,15,0	1/1:4,1:5:2.97:20,3,0	./.	0/0:6,0:5:5.90:0,6,39	0/0:10,0:7:8.52:0,9,57	0/0:18,0:5:11.48:0,11,60	1/1:17,1:13:26.64:204,27,0	1/1:8,0:8:14.80:99,15,0	1/1:40,1:24:32.82:250,33,0
chr10	91328220	.	AAAAAAG	A	4226.06	PASS	AB=0.771;AC=32;AF=0.571;AN=56;BaseQRankSum=5.529;DP=359;FS=110.375;HRun=0;HaplotypeScore=106.5243;InbreedingCoeff=0.2730;MQ=44.36;MQ0=13;MQRankSum=-5.535;QD=24.15;ReadPosRankSum=-0.272;VQSLOD=0.2171;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:57.12:0,57,1657	0/0:4,0:4:9.03:0,9,243	0/0:42,0:8:9.65:0,10,183	0/0:65,0:10:16.03:0,16,95	1/1:13,6:17:32.95:502,33,0	0/1:3,4:7:64.33:253,0,64	0/1:4,1:5:57.12:87,0,57	1/1:6,0:5:12.04:196,12,0	1/1:6,2:8:12:188,12,0	0/1:8,3:11:99:251,0,143	0/1:7,3:10:99:342,0,138	1/1:4,1:5:5.95:81,6,0	0/1:1,3:4:57.14:57,0,86	1/1:3,2:5:9.03:186,9,0	0/0:11,0:11:27.09:0,27,759	0/1:7,1:7:66.78:67,0,98	0/0:28,0:27:66.07:0,66,1837	1/1:10,2:12:21.07:388,21,0	0/0:6,0:2:0.47:0,0,1	1/1:9,4:13:26.97:396,27,0	1/1:4,0:4:3.01:36,3,0	0/0:1,0:1:3.01:0,3,96	0/1:9,2:11:99:145,0,237	1/1:8,0:8:6.02:73,6,0	0/1:8,2:10:94.96:95,0,230	1/1:6,1:7:20.98:308,21,0	1/1:7,3:10:16.15:288,16,0	1/1:10,2:12:18.87:285,19,0
chr10	91328249	.	AGAG	A	383.50	PASS	AB=0.936;AC=11;AF=0.196;AN=56;BaseQRankSum=6.361;DP=408;FS=0.000;HRun=0;HaplotypeScore=137.7099;InbreedingCoeff=-0.0663;MQ=46.87;MQ0=19;MQRankSum=-1.570;QD=2.03;ReadPosRankSum=-0.944;VQSLOD=2.2226;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.20:0,60,1346	0/0:5,0:5:15.05:0,15,342	0/0:56,0:11:13.89:0,14,184	0/1:97,2:17:15.06:15,0,121	0/1:19,2:19:99:160,0,299	0/0:9,0:9:27.09:0,27,447	0/0:3,0:3:9.03:0,9,180	0/0:10,0:8:20.90:0,21,259	0/1:8,0:8:30.35:30,0,129	0/0:11,0:11:30.10:0,30,544	0/0:11,0:11:29.75:0,30,484	0/1:7,0:7:2.54:3,0,155	0/0:6,0:6:18.06:0,18,379	0/1:5,0:5:24.41:24,0,106	0/0:12,0:12:36.12:0,36,826	0/0:6,0:5:15.05:0,15,287	0/0:32,0:31:88.18:0,88,1924	0/1:7,0:10:7.36:7,0,254	0/0:5,1:5:9.03:0,9,116	0/1:10,1:11:78.08:78,0,176	1/1:1,2:3:7.84:106,8,0	0/0:1,0:1:3.01:0,3,68	0/0:6,0:6:18.06:0,18,348	0/0:1,0:2:2.94:0,3,44	0/0:9,0:9:24.08:0,24,470	0/0:11,0:11:13.04:0,13,329	0/1:13,0:13:34.33:34,0,326	0/1:9,2:11:68.02:68,0,238
chr10	91328253	.	AAAAAAG	A	1076.27	PASS	AB=0.928;AC=15;AF=0.268;AN=56;BaseQRankSum=5.219;DP=427;FS=10.226;HRun=0;HaplotypeScore=166.7613;InbreedingCoeff=-0.0996;MQ=46.47;MQ0=18;MQRankSum=-6.206;QD=3.83;ReadPosRankSum=-1.877;VQSLOD=1.7904;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.19:0,60,1763	0/0:5,0:5:12.01:0,12,326	0/1:56,0:11:2.02:2,0,91	0/1:93,0:17:8.69:9,0,78	0/1:19,3:20:41.37:317,0,41	0/0:9,0:9:24.60:0,25,329	0/0:5,0:5:9.17:0,9,145	0/1:15,0:11:6.26:6,0,141	0/1:8,0:8:2.04:135,0,2	0/0:12,0:12:30.31:0,30,441	0/0:12,0:12:26.30:0,26,261	0/1:6,1:7:15.89:52,0,16	0/0:6,0:6:15.59:0,16,121	0/1:3,2:5:7.80:118,0,8	0/0:13,0:13:39.13:0,39,1207	0/0:6,0:5:13.51:0,14,187	0/0:32,0:31:92.74:0,93,2703	0/1:14,0:14:99:115,0,168	0/0:8,0:7:10.80:0,11,47	0/1:9,2:11:8.10:149,0,8	1/1:4,0:4:7.53:60,8,0	0/0:1,0:1:2.50:0,2,9	0/0:6,0:6:17.50:0,18,268	0/1:5,0:5:13.16:13,0,80	0/0:9,0:9:21.61:0,22,302	0/1:12,1:13:41.28:48,0,41	0/1:11,3:14:45.88:162,0,46	0/1:12,0:12:21.90:42,0,22
chr10	91328292	.	GAAAGA	G	1992.39	PASS	AB=0.912;AC=19;AF=0.339;AN=56;BaseQRankSum=4.701;DP=456;FS=23.230;HRun=0;HaplotypeScore=171.9311;InbreedingCoeff=0.5391;MQ=38.00;MQ0=17;MQRankSum=-7.678;QD=15.09;ReadPosRankSum=0.643;VQSLOD=1.6331;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:54.18:0,54,1463	0/0:7,0:7:21.07:0,21,609	0/1:33,0:6:11.96:12,0,131	0/0:65,0:8:3.82:0,4,38	0/0:16,0:16:29.11:0,29,498	1/1:7,2:9:15.91:208,16,0	1/1:4,2:6:12.01:167,12,0	0/0:40,0:29:66.15:0,66,1280	0/0:10,0:10:20.73:0,21,406	1/1:7,4:11:23.35:416,23,0	1/1:7,2:9:21.46:250,21,0	0/0:12,0:12:27.81:0,28,656	1/1:6,4:10:24.88:329,25,0	0/0:6,0:6:12.04:0,12,241	0/0:12,0:12:33.11:0,33,884	1/1:8,2:9:3.99:260,4,0	0/0:31,0:31:87.25:0,87,2335	0/1:11,2:13:99:155,0,157	0/0:20,0:15:32.93:0,33,605	0/0:11,0:11:21.01:0,21,478	0/0:6,0:6:15.05:0,15,333	1/1:4,0:4:11.97:114,12,0	0/1:5,1:6:46.72:52,0,47	0/1:7,0:7:29.98:30,0,93	0/1:11,2:13:17.10:194,0,17	0/0:22,0:22:60.20:0,60,1385	0/0:24,0:24:54.18:0,54,1251	0/0:15,0:15:42.07:0,42,816
chr10	91328297	.	A	AG	480.55	PASS	AB=0.889;AC=11;AF=0.196;AN=56;BaseQRankSum=3.729;DP=458;FS=4.262;HRun=1;HaplotypeScore=143.8440;InbreedingCoeff=-0.2458;MQ=38.95;MQ0=16;MQRankSum=-5.596;QD=4.62;ReadPosRankSum=-2.815;VQSLOD=-0.6460;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.15:0,69,906	0/0:7,0:7:21.07:0,21,294	0/0:36,0:7:9.04:0,9,121	0/0:71,0:10:7.37:0,7,81	0/0:16,0:16:48.08:0,48,601	0/1:7,1:8:27.89:28,0,105	0/0:6,0:6:10.54:0,11,125	0/0:40,0:30:87.26:0,87,1191	0/1:10,0:10:5.47:5,0,307	0/1:9,2:11:68.32:104,0,68	0/1:8,1:9:22.23:22,0,140	0/1:11,0:11:9.94:10,0,385	0/0:9,0:9:22.90:0,23,190	0/0:5,0:5:12.04:0,12,167	0/0:12,0:12:33.11:0,33,461	0/1:10,1:10:68.96:69,0,126	0/0:31,0:31:93.29:0,93,1282	0/1:9,5:14:99:177,0,163	0/0:18,0:14:39.10:0,39,529	0/0:12,0:12:32.84:0,33,429	0/0:6,0:6:18.06:0,18,251	0/1:5,0:5:12.85:13,0,115	0/1:4,1:5:26.90:51,0,27	0/1:6,2:8:73.05:73,0,172	0/1:10,2:12:72.34:72,0,128	0/0:24,0:24:72.22:0,72,968	0/0:20,0:20:57.16:0,57,776	0/0:16,0:16:45.07:0,45,570
chr10	91328325	.	A	AAAAAG	8703.44	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=5.660;DP=511;FS=33.597;HRun=0;HaplotypeScore=135.7184;InbreedingCoeff=0.5965;MQ=49.36;MQ0=16;MQRankSum=-6.001;QD=28.82;ReadPosRankSum=1.845;VQSLOD=2.9937;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:57.20:0,57,1051	0/0:9,0:9:21.04:0,21,330	0/0:52,0:14:11.44:0,11,98	0/0:87,0:18:9.52:0,10,184	1/1:16,0:16:0.14:391,0,0	1/1:5,7:14:12.04:247,12,0	1/1:4,6:11:15.05:371,15,0	1/1:33,0:29:24.98:320,25,0	1/1:10,0:9:12.04:143,12,0	1/1:5,7:14:30.08:667,30,0	1/1:10,0:10:21.07:403,21,0	1/1:12,0:12:11.50:268,11,0	1/1:9,1:10:18.05:288,18,0	1/1:8,0:8:5.73:139,6,0	0/0:10,0:10:24.08:0,24,437	1/1:7,2:9:14.91:329,15,0	0/0:26,0:26:54.14:0,54,920	1/1:17,1:18:8.48:377,8,0	0/1:18,0:17:3.86:417,0,4	1/1:14,0:14:26.38:529,26,0	1/1:4,0:4:9.03:200,9,0	1/1:8,1:9:21.07:430,21,0	1/1:5,1:6:12.04:224,12,0	1/1:5,3:8:12.04:211,12,0	1/1:9,0:9:21.07:426,21,0	0/1:33,0:33:2.44:998,0,2	0/1:22,0:22:8.57:693,0,9	0/1:14,0:14:10.24:632,0,10
chr10	91332120	.	G	GCTACA	25617.86	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-11.919;DP=449;FS=22.404;HRun=0;HaplotypeScore=68.0326;InbreedingCoeff=0.9762;MQ=56.33;MQ0=0;MQRankSum=-6.424;QD=79.07;ReadPosRankSum=2.536;VQSLOD=4.5268;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:26:72.25:0,72,1655	0/0:8,0:8:24.08:0,24,556	0/0:23,0:14:42.11:0,42,829	0/0:10,0:9:21.07:0,21,424	1/1:0,19:20:57.20:1890,57,0	1/1:3,10:15:33.11:1045,33,0	1/1:2,8:10:30.10:995,30,0	1/1:5,16:25:72.20:2120,72,0	1/1:3,18:22:51.18:1645,51,0	1/1:1,7:9:24.08:711,24,0	1/1:0,5:5:9.03:298,9,0	1/1:2,11:14:36.12:1147,36,0	1/1:0,12:15:33.11:1086,33,0	1/1:1,18:22:57.20:1842,57,0	0/0:18,0:18:51.17:0,51,1159	1/1:1,17:21:42.14:1396,42,0	0/0:38,0:38:99:0,105,2293	1/1:1,16:18:51.18:1688,51,0	1/1:4,9:16:39.11:1104,39,0	1/1:0,6:6:15.05:499,15,0	1/1:1,7:9:14.77:422,15,0	1/1:0,11:13:33.11:1097,33,0	1/1:0,8:11:24.08:796,24,0	1/1:1,8:9:18.06:598,18,0	1/1:1,16:18:48.16:1594,48,0	1/1:3,9:13:39.13:1169,39,0	1/1:4,15:22:57.20:1879,57,0	1/1:0,7:9:18.06:599,18,0
chr10	91332456	.	ATT	A	880.56	PASS	AB=0.833;AC=19;AF=0.365;AN=52;BaseQRankSum=-0.181;DP=306;FS=0.704;HRun=14;HaplotypeScore=44.8402;InbreedingCoeff=0.6141;MQ=47.02;MQ0=20;MQRankSum=-2.805;QD=9.68;ReadPosRankSum=-0.204;VQSLOD=0.9298;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:14:35.52:0,36,416	0/1:4,1:5:12.72:13,0,136	0/0:40,0:1:3.01:0,3,33	0/0:53,1:8:8.02:0,8,40	1/1:2,1:3:2.99:28,3,0	0/0:12,0:18:50.67:0,51,468	0/0:0,0:2:3:0,3,29	1/1:13,13:27:5.01:332,5,0	./.	0/0:2,0:7:12.02:0,12,133	0/0:2,0:2:3.01:0,3,40	1/1:1,2:3:6.01:56,6,0	0/0:2,0:7:6.48:0,6,58	1/1:2,3:4:2.99:28,3,0	0/0:9,0:9:24.02:0,24,295	0/0:3,0:4:9.02:0,9,111	0/0:22,1:23:26.37:0,26,628	0/0:6,0:17:24.53:0,25,282	1/1:11,3:13:17.35:134,17,0	1/1:1,4:5:11.99:110,12,0	0/0:4,0:2:0:0,0,0	./.	0/0:2,0:4:9.02:0,9,100	0/0:1,0:2:0.47:0,0,1	0/0:2,0:5:6.01:0,6,71	1/1:5,7:13:11.86:158,12,0	1/1:3,4:7:11.98:111,12,0	1/1:3,4:6:8.97:83,9,0
chr10	91332811	.	C	CG	4673.18	PASS	AB=0.944;AC=23;AF=0.411;AN=56;BaseQRankSum=-14.661;DP=591;FS=0.371;HRun=7;HaplotypeScore=84.7760;InbreedingCoeff=0.9270;MQ=75.78;MQ0=0;MQRankSum=-1.868;QD=22.04;ReadPosRankSum=1.306;VQSLOD=4.6399;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:90.13:0,90,868	0/0:9,0:9:24.04:0,24,231	0/0:20,0:21:53.10:0,53,491	0/0:16,0:16:31.80:0,32,268	0/0:31,0:31:75.09:0,75,722	1/1:3,15:18:10.15:406,10,0	1/1:1,12:13:33.10:399,33,0	0/0:40,0:40:99:0,102,981	0/0:21,0:21:60.10:0,60,579	1/1:7,13:20:39.12:471,39,0	1/1:5,10:15:18.06:217,18,0	0/0:24,0:24:63.07:0,63,608	1/1:3,22:25:40.23:768,40,0	0/0:21,0:21:57.08:0,57,550	0/0:22,0:22:60.09:0,60,579	1/1:4,13:17:36.11:435,36,0	0/0:32,0:32:87.05:0,87,828	1/1:5,18:23:28.18:623,28,0	0/0:16,0:16:42.01:0,42,402	0/0:19,0:19:42.03:0,42,405	0/0:29,0:29:87.14:0,87,838	1/1:4,9:13:18.06:217,18,0	1/1:3,12:15:30.09:362,30,0	1/1:4,19:23:13.15:442,13,0	1/1:3,10:13:27.08:326,27,0	0/1:16,1:17:6.29:6,0,230	0/0:27,0:27:78.11:0,78,751	0/0:13,0:13:39.06:0,39,375
chr10	91335085	.	G	GTTCT	4223.57	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-4.552;DP=449;FS=14.642;HRun=0;HaplotypeScore=107.4195;InbreedingCoeff=0.7975;MQ=74.25;MQ0=3;MQRankSum=-2.410;QD=20.50;ReadPosRankSum=-1.687;VQSLOD=3.2756;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:77.51:0,78,979	0/0:5,0:5:11.81:0,12,119	0/0:20,0:15:24.66:0,25,226	0/0:20,0:10:6.91:0,7,99	1/1:12,17:31:45.04:741,45,0	0/0:11,0:11:14.49:0,14,125	0/0:13,0:13:25.73:0,26,200	1/1:12,12:28:46.33:513,46,0	1/1:2,4:8:6.01:123,6,0	0/0:13,0:12:18.82:0,19,141	0/0:9,0:9:11.77:0,12,101	1/1:16,0:16:6.49:102,6,0	0/0:7,0:7:6.83:0,7,51	1/1:4,8:15:6.02:129,6,0	0/0:16,0:16:41.88:0,42,481	0/0:11,0:11:2.97:0,3,30	0/0:25,0:25:59.52:0,60,722	0/0:14,0:14:6:0,6,54	1/1:5,7:12:24:290,24,0	1/1:13,1:15:14.64:234,15,0	1/1:5,6:11:2.96:69,3,0	0/0:3,0:3:3:0,3,29	0/0:11,0:11:2.43:0,2,29	0/0:12,0:12:19.06:0,19,117	0/0:19,0:19:18.10:0,18,104	1/1:22,3:25:45.50:657,46,0	1/1:20,2:23:27.08:433,27,0	1/1:10,12:22:45.15:932,45,0
chr10	91335091	.	TC	T	2389.15	PASS	AB=0.879;AC=24;AF=0.429;AN=56;BaseQRankSum=-3.098;DP=493;FS=18.940;HRun=1;HaplotypeScore=76.6726;InbreedingCoeff=0.6397;MQ=68.71;MQ0=4;MQRankSum=-0.461;QD=13.50;ReadPosRankSum=-5.254;VQSLOD=0.2855;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:40:0,40,619	0/0:7,0:7:5.50:0,5,90	0/0:19,3:13:13.49:0,13,159	0/0:17,2:8:16.04:0,16,116	0/0:28,0:28:51.63:0,52,338	1/1:14,0:14:37.64:295,38,0	1/1:11,3:14:33.76:319,34,0	0/0:28,0:28:59.04:0,59,440	0/1:10,0:10:5.10:5,0,36	1/1:0,14:13:35.99:342,36,0	1/1:13,2:15:38.45:327,38,0	0/1:17,0:17:31.92:33,0,32	1/1:8,1:9:23.15:170,23,0	0/0:17,0:17:13.28:0,13,88	0/0:20,0:20:23.54:0,24,361	1/1:0,12:12:6.01:58,6,0	0/0:33,0:33:26.11:0,26,560	0/1:1,14:15:12.21:72,0,12	0/0:11,0:11:26.71:0,27,205	0/0:15,0:15:15.53:0,16,166	0/1:10,0:10:12.01:12,0,15	1/1:3,0:3:5.84:60,6,0	1/1:0,11:11:4.88:47,5,0	1/1:11,1:12:36.04:358,36,0	1/1:21,0:21:56.32:496,56,0	0/0:27,0:27:3.96:0,4,402	0/0:29,0:29:40.43:0,40,298	0/0:21,0:21:46.12:0,46,285
chr10	91335092	.	C	CTTTCT	2936.17	PASS	AB=0.990;AC=22;AF=0.393;AN=56;BaseQRankSum=-3.348;DP=500;FS=16.345;HRun=0;HaplotypeScore=120.9893;InbreedingCoeff=0.1295;MQ=68.29;MQ0=4;MQRankSum=-0.842;QD=9.44;ReadPosRankSum=-1.118;VQSLOD=1.3163;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:37:69.66:0,70,1119	0/0:8,0:8:6.26:0,6,128	0/0:22,0:14:17.84:0,18,227	0/1:18,0:8:6.32:6,0,108	1/1:28,1:29:21.73:575,22,0	0/1:14,0:14:3.58:4,0,80	0/0:13,0:13:23.76:0,24,186	1/1:26,0:27:15.19:380,15,0	0/1:9,1:10:0.17:121,0,0	0/1:14,0:13:0.49:0,0,126	0/1:15,0:15:51.08:51,0,62	0/1:17,0:17:19.71:57,0,20	0/1:10,0:9:15.88:16,0,36	0/1:18,0:18:7.73:87,0,8	0/0:20,0:21:24.97:0,25,449	0/0:12,0:12:3.01:0,3,36	0/0:32,0:33:69.75:0,70,823	0/0:16,0:16:0.55:0,1,51	1/1:12,0:12:23.90:246,24,0	1/1:8,3:16:14.72:246,15,0	0/1:10,0:10:17.99:44,0,18	0/0:3,0:3:2.54:0,3,33	0/0:11,0:11:0.97:0,1,30	0/0:12,0:12:14.63:0,15,118	0/1:20,0:20:14.41:14,0,60	0/1:27,0:28:3.01:395,0,3	0/1:29,0:29:36.59:191,0,37	1/1:20,0:22:27.11:673,27,0
chr10	91335093	.	T	TTTC	2340.41	PASS	AB=0.935;AC=14;AF=0.250;AN=56;BaseQRankSum=-4.240;DP=497;FS=8.200;HRun=0;HaplotypeScore=99.3434;InbreedingCoeff=0.0354;MQ=68.09;MQ0=4;MQRankSum=0.064;QD=10.50;ReadPosRankSum=3.618;VQSLOD=2.5667;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:93.36:0,93,1170	0/0:7,0:7:17.35:0,17,146	0/0:25,0:14:14.78:0,15,221	0/0:21,0:8:14.75:0,15,118	0/1:28,0:28:57.95:462,0,58	0/0:14,0:14:18.36:0,18,164	0/0:13,0:13:29.58:0,30,265	0/1:25,0:25:53.24:270,0,53	1/1:10,0:10:11.85:118,12,0	0/0:15,0:14:21.26:0,21,167	0/0:15,0:15:13.43:0,13,135	0/1:17,0:17:19.85:37,0,20	0/0:10,0:9:11.94:0,12,99	0/1:18,0:18:55.51:63,0,56	0/0:22,0:22:50.71:0,51,540	0/1:12,0:12:3.47:3,0,21	0/0:33,0:33:84.47:0,84,921	0/0:17,0:17:11.74:0,12,110	1/1:10,0:10:20.92:220,21,0	0/1:15,0:15:7.08:130,0,7	0/1:10,0:10:32.81:33,0,40	0/0:3,0:3:2.84:0,3,39	0/0:11,0:11:5.26:0,5,48	0/0:11,0:11:22.23:0,22,206	0/0:20,0:20:21.15:0,21,167	0/1:16,9:26:51.53:403,0,52	0/1:18,12:30:96.78:212,0,97	0/1:20,2:22:43.59:550,0,44
chr10	91335547	.	T	TG	34.44	PASS	AB=0.938;AC=8;AF=0.444;AN=18;BaseQRankSum=1.842;DP=273;FS=14.347;HRun=0;HaplotypeScore=34.5965;MQ=23.76;MQ0=169;MQRankSum=-1.523;QD=0.51;ReadPosRankSum=-1.203;VQSLOD=-0.3386;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,2:23:15.40:15,0,412	0/1:13,1:9:9.46:9,0,231	./.	./.	./.	1/1:10,1:1:3.01:40,3,0	./.	./.	./.	./.	./.	./.	1/1:3,1:1:3.01:42,3,0	./.	0/0:26,0:21:47.14:0,47,481	./.	0/0:49,0:30:59.82:0,60,633	0/0:15,0:1:2.99:0,3,23	0/0:6,0:2:2.98:0,3,21	./.	./.	./.	1/1:5,0:1:2.96:19,3,0	./.	./.	./.	./.	./.
chr10	91335630	.	TTC	T	580.59	PASS	AB=0.894;AC=14;AF=0.250;AN=56;BaseQRankSum=8.071;DP=507;FS=2.084;HRun=0;HaplotypeScore=92.3455;InbreedingCoeff=-0.3042;MQ=50.79;MQ0=19;MQRankSum=-1.617;QD=2.35;ReadPosRankSum=5.434;VQSLOD=1.4196;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,3:40:7.37:7,0,1515	0/0:11,0:11:26.68:0,27,465	0/0:32,0:19:57.16:0,57,1004	0/0:19,0:9:21.06:0,21,360	0/0:11,0:11:26.71:0,27,296	0/1:13,3:15:92.07:92,0,589	0/0:22,0:22:65.13:0,65,1057	0/0:22,0:20:52.89:0,53,532	0/1:15,1:15:1.67:2,0,627	0/0:17,0:17:50.14:0,50,820	0/0:9,0:9:26.54:0,27,382	0/1:7,1:8:21.73:22,0,315	0/1:10,1:11:13.34:13,0,430	0/1:16,3:19:83.11:83,0,640	0/0:22,0:22:55.08:0,55,1162	0/1:21,3:23:99:100,0,736	0/1:34,2:34:28.34:28,0,1410	0/1:14,1:13:45.50:45,0,292	0/0:17,0:15:22.58:0,23,439	0/0:13,0:12:35.61:0,36,596	0/1:12,2:12:64.94:65,0,313	0/1:14,1:15:6.78:7,0,498	0/0:17,0:17:50.04:0,50,680	0/1:5,5:10:99:205,0,138	0/1:13,2:13:53.51:54,0,431	0/0:24,0:23:64.67:0,65,1008	0/0:23,1:24:25.92:0,26,1059	0/1:7,0:5:6.76:7,0,207
chr10	91342542	.	G	GA	1285.18	PASS	AB=0.804;AC=21;AF=0.375;AN=56;BaseQRankSum=-3.296;DP=453;FS=2.611;HRun=14;HaplotypeScore=61.8471;InbreedingCoeff=0.3117;MQ=56.35;MQ0=10;MQRankSum=0.102;QD=5.84;ReadPosRankSum=-0.851;VQSLOD=2.1813;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:7.54:0,8,174	0/0:8,0:10:13.79:0,14,83	0/1:6,0:6:13.64:14,0,20	0/0:4,0:5:7.02:0,7,28	0/0:20,0:22:21.06:0,21,124	1/1:5,12:18:8.82:182,9,0	1/1:5,11:16:17.95:151,18,0	0/0:23,0:25:29.73:0,30,172	0/0:10,1:12:13.73:0,14,83	1/1:4,8:12:20.15:202,20,0	0/1:11,10:22:19.06:118,0,19	0/0:19,0:19:28.52:0,29,179	0/1:8,7:15:26.12:41,0,26	0/0:16,0:17:22.45:0,22,140	0/0:18,0:20:28.40:0,28,179	0/1:8,9:17:1.50:114,0,1	0/0:24,0:29:38.43:0,38,229	0/1:14,12:25:10.45:147,0,10	0/0:12,0:17:22.82:0,23,119	0/0:11,0:12:10.46:0,10,75	0/0:10,0:11:13.30:0,13,80	1/1:2,7:9:8.91:65,9,0	1/1:6,6:12:15:132,15,0	1/1:6,13:18:10.73:218,11,0	0/1:5,4:9:12.38:21,0,12	0/1:12,1:12:11.75:12,0,58	0/1:12,0:13:43.88:45,0,44	0/1:8,1:9:9.57:10,0,66
chr10	91343497	.	T	TAG	16602.86	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-15.600;DP=651;FS=1.720;HRun=0;HaplotypeScore=70.7414;InbreedingCoeff=0.9642;MQ=80.04;MQ0=3;MQRankSum=-3.051;QD=44.63;ReadPosRankSum=1.621;VQSLOD=6.3972;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,41:45:99:1868,105,0	1/1:1,8:9:21.07:377,21,0	0/0:20,0:20:54:0,54,703	0/0:19,0:19:45.05:0,45,561	1/1:2,26:28:69.24:1242,69,0	0/0:14,0:14:36.10:0,36,485	0/0:32,0:32:90.30:0,90,1259	1/1:1,21:24:69.21:1185,69,0	1/1:3,21:25:60.20:1080,60,0	0/0:22,0:22:60.20:0,60,827	0/0:16,0:16:45.14:0,45,613	1/1:2,24:26:57.20:1026,57,0	0/0:17,0:17:48.16:0,48,670	1/1:1,24:25:63.22:1134,63,0	1/1:1,18:19:45.15:810,45,0	0/0:22,0:22:63.21:0,63,882	1/1:1,29:27:72.25:1296,72,0	0/0:29,0:29:81.23:0,81,1112	1/1:1,22:23:63.20:1104,63,0	1/1:0,15:15:42.14:756,42,0	1/1:3,43:47:99:2214,123,0	0/0:12,0:12:36.12:0,36,504	0/0:13,0:13:30.10:0,30,420	0/0:44,0:44:99:0,120,1643	0/0:19,0:19:51.14:0,51,679	1/1:3,25:29:0.23:1286,0,0	1/1:0,14:16:45.15:808,45,0	1/1:2,9:11:24.08:416,24,0
chr10	91347810	.	G	GGTGT	5598.02	PASS	AB=0.811;AC=40;AF=0.769;AN=52;BaseQRankSum=0.819;DP=629;FS=5.618;HRun=0;HaplotypeScore=132.2288;InbreedingCoeff=0.4436;MQ=64.61;MQ0=16;MQRankSum=-3.209;QD=11.59;ReadPosRankSum=-2.593;VQSLOD=3.5479;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:35:24:0,24,285	0/0:6,0:6:3.01:0,3,47	1/1:23,0:16:0.47:1,0,0	./.	1/1:10,10:20:13.29:288,13,0	1/1:14,1:22:12.04:191,12,0	1/1:23,0:27:20.83:295,21,0	0/1:28,0:28:28.74:179,0,29	1/1:11,10:21:24.08:570,24,0	1/1:25,0:25:28.40:337,28,0	1/1:8,0:13:6.02:104,6,0	1/1:10,16:27:24.08:566,24,0	1/1:15,0:19:18.04:253,18,0	1/1:5,12:19:23.82:511,24,0	0/0:21,0:25:30.05:0,30,366	1/1:15,0:19:3.48:54,3,0	0/0:26,0:36:44.19:0,44,764	1/1:19,0:19:12.01:168,12,0	0/1:13,4:17:6.93:256,0,7	1/1:7,6:15:5.33:141,5,0	0/1:31,0:44:38.48:73,0,38	1/1:19,0:25:9.03:159,9,0	./.	1/1:16,0:22:15.05:238,15,0	1/1:14,0:18:12.02:159,12,0	1/1:13,10:27:34.51:599,35,0	0/1:10,5:18:1.38:413,0,1	1/1:7,0:7:3.01:45,3,0
chr10	91350060	.	GA	G	3557.89	PASS	AB=0.605;AC=21;AF=0.375;AN=56;BaseQRankSum=8.326;DP=679;FS=6.601;HRun=12;HaplotypeScore=79.5667;InbreedingCoeff=0.9218;MQ=72.71;MQ0=1;MQRankSum=-2.116;QD=15.40;ReadPosRankSum=1.799;VQSLOD=4.5789;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:66:99:0,132,1275	0/0:8,0:8:15.02:0,15,147	0/0:23,0:20:21.35:0,21,184	0/0:21,0:17:24.90:0,25,228	0/0:15,1:18:15.65:0,16,316	1/1:4,12:17:37.89:284,38,0	1/1:7,18:26:49.83:377,50,0	0/0:29,1:32:72.68:0,73,691	0/0:22,0:22:57.07:0,57,564	1/1:6,15:23:45.85:336,46,0	1/1:5,15:20:44.78:347,45,0	0/0:22,0:24:50.92:0,51,494	1/1:9,16:25:11.81:230,12,0	0/0:27,0:27:60.07:0,60,584	0/0:26,1:29:48.55:0,49,626	1/1:2,23:26:61.79:470,62,0	0/0:31,0:32:83.98:0,84,829	1/1:4,18:22:31.99:393,32,0	0/0:25,0:25:48.90:0,49,482	0/0:23,0:25:59.78:0,60,572	0/0:25,0:28:62.79:0,63,601	0/1:8,14:23:8.69:285,0,9	1/1:4,11:15:26.86:209,27,0	1/1:2,17:19:26.35:387,26,0	1/1:2,12:14:31.92:238,32,0	0/0:23,1:25:36.70:0,37,527	0/0:27,0:27:62.57:0,63,604	0/0:14,1:15:18.82:0,19,360
chr10	91351656	.	GGT	G	2901.06	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.935;DP=698;FS=7.494;HRun=0;HaplotypeScore=108.2950;InbreedingCoeff=0.9631;MQ=63.18;MQ0=6;MQRankSum=-0.606;QD=24.18;ReadPosRankSum=5.652;VQSLOD=4.3904;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,46:52:97.86:1253,98,0	1/1:1,4:5:9.03:104,9,0	0/0:67,0:24:51:0,51,773	0/0:42,0:17:14.96:0,15,332	0/0:30,0:30:87.17:0,87,1281	0/0:16,0:16:47.89:0,48,861	0/0:21,0:21:63.11:0,63,1041	0/0:24,0:24:72.07:0,72,843	0/0:23,0:23:66.14:0,66,980	0/0:24,0:24:72.22:0,72,1303	0/0:19,0:19:54.07:0,54,905	0/0:25,0:25:75.25:0,75,1230	0/0:15,0:15:45.07:0,45,702	0/0:11,0:11:33.02:0,33,511	1/1:1,30:31:72.21:833,72,0	0/0:25,0:25:75.16:0,75,1185	1/1:4,28:32:75.22:867,75,0	0/0:31,0:31:90.10:0,90,1406	0/0:16,0:15:47.93:0,48,566	0/0:20,0:20:60.04:0,60,871	0/0:23,0:23:69.22:0,69,1098	0/0:26,0:26:78.22:0,78,1369	0/0:17,0:17:50.12:0,50,805	0/0:22,0:22:63.14:0,63,1053	0/0:15,0:15:42.06:0,42,766	0/0:31,0:31:92.68:0,93,1392	0/0:32,0:32:96.18:0,96,1489	0/0:3,0:3:9.03:0,9,135
chr10	91353907	.	C	CA	556.35	PASS	AB=0.891;AC=9;AF=0.161;AN=56;BaseQRankSum=6.399;DP=343;FS=0.000;HRun=11;HaplotypeScore=60.2280;InbreedingCoeff=0.4824;MQ=60.02;MQ0=5;MQRankSum=-6.471;QD=7.04;ReadPosRankSum=-0.746;VQSLOD=1.5153;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,3:18:12.38:223,12,0	1/1:7,2:9:11.82:166,12,0	1/1:10,0:3:0.47:1,0,0	0/1:13,0:9:5.99:25,0,6	0/0:19,0:19:29.86:0,30,232	0/0:17,0:17:34.64:0,35,258	0/0:11,0:11:17.90:0,18,139	0/0:21,1:24:14.29:0,14,278	0/0:12,0:12:35.85:0,36,276	0/0:8,0:8:5.95:0,6,44	0/0:12,0:11:11.83:0,12,88	0/0:5,0:5:8.96:0,9,70	0/0:6,0:6:8.93:0,9,69	0/0:7,0:7:11.92:0,12,90	0/1:9,0:9:14.32:35,0,14	0/0:6,0:6:8.96:0,9,70	0/1:11,5:16:4.53:242,0,5	0/0:10,0:10:17.87:0,18,138	0/0:24,0:21:17.15:0,17,306	0/0:7,1:8:14.94:0,15,116	0/0:4,0:4:8.96:0,9,70	0/0:5,0:5:5.97:0,6,46	0/0:9,0:9:17.92:0,18,139	0/0:10,0:10:11.87:0,12,93	0/0:14,0:14:29.80:0,30,226	0/0:15,0:15:38.82:0,39,300	0/0:18,0:17:35.80:0,36,273	0/0:18,0:19:30.92:0,31,255
chr10	91353915	.	A	AAAAAG	1835.01	PASS	AB=0.783;AC=7;AF=0.125;AN=56;BaseQRankSum=2.987;DP=344;FS=3.502;HRun=0;HaplotypeScore=77.9296;InbreedingCoeff=0.4909;MQ=63.16;MQ0=4;MQRankSum=-6.619;QD=26.21;ReadPosRankSum=0.701;VQSLOD=3.0375;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,8:18:24.12:754,24,0	1/1:5,4:9:14.44:437,14,0	0/0:12,0:4:4.58:0,5,43	0/1:15,0:10:20.24:20,0,50	0/0:17,0:17:45.08:0,45,639	0/0:18,0:18:49.91:0,50,669	0/0:10,0:10:26.99:0,27,302	0/0:31,0:31:80.77:0,81,944	0/0:12,0:12:36.07:0,36,601	0/0:5,0:5:14.97:0,15,126	0/0:11,0:11:29.77:0,30,359	0/0:6,0:6:14.97:0,15,207	0/0:6,0:6:13.23:0,13,132	0/0:7,0:7:15.02:0,15,208	0/1:1,6:7:14.20:160,0,14	0/0:4,0:4:9.03:0,9,155	0/1:13,4:16:3.11:602,0,3	0/0:9,0:9:26.90:0,27,290	0/0:26,0:23:62.61:0,63,775	0/0:7,0:7:18.03:0,18,272	0/0:4,0:4:9.03:0,9,167	0/0:4,0:4:5.99:0,6,79	0/0:7,0:7:21.02:0,21,287	0/0:10,0:10:11.99:0,12,158	0/0:13,0:13:36.03:0,36,490	0/0:18,0:18:51.08:0,51,764	0/0:16,0:15:42:0,42,576	0/0:21,0:20:42.06:0,42,593
chr10	91354007	.	CT	C	1657.47	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=3.334;DP=271;FS=1.140;HRun=10;HaplotypeScore=39.4711;InbreedingCoeff=0.7387;MQ=70.33;MQ0=1;MQRankSum=1.527;QD=17.82;ReadPosRankSum=3.962;VQSLOD=3.7494;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:9.41:0,9,234	0/0:1,0:1:3.01:0,3,33	0/0:10,0:7:6.25:0,6,134	0/0:10,1:7:5.89:0,6,46	0/0:8,0:8:18.05:0,18,199	1/1:5,8:13:23.99:208,24,0	1/1:0,2:2:6:52,6,0	0/0:29,0:29:66.18:0,66,730	0/0:11,0:11:27.07:0,27,299	1/1:1,8:9:23.98:208,24,0	1/1:2,5:7:14.99:130,15,0	0/0:4,0:4:3.01:0,3,33	1/1:1,8:8:24:208,24,0	0/0:2,0:2:3.01:0,3,33	0/1:5,0:4:6.33:6,0,58	1/1:0,2:2:6:52,6,0	0/0:20,0:19:42.11:0,42,461	1/1:3,15:18:41.99:365,42,0	0/0:21,0:22:47.96:0,48,506	0/0:13,0:13:36.10:0,36,398	0/0:1,0:1:3.01:0,3,33	0/0:1,0:1:0:0,0,0	1/1:1,4:5:12:104,12,0	1/1:0,15:15:41.99:365,42,0	1/1:1,7:7:18:156,18,0	0/0:11,0:11:21.03:0,21,221	0/0:14,0:14:17.16:0,17,336	0/0:8,0:8:21.06:0,21,232
chr10	91354581	.	GA	G	5220.87	PASS	AB=0.933;AC=48;AF=0.857;AN=56;BaseQRankSum=0.309;DP=410;FS=0.000;HRun=2;HaplotypeScore=157.9424;InbreedingCoeff=-0.1295;MQ=56.96;MQ0=1;MQRankSum=1.106;QD=12.73;ReadPosRankSum=0.288;VQSLOD=3.6668;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:37.28:265,37,0	1/1:2,0:2:5.98:46,6,0	0/1:15,3:10:42.26:64,0,42	0/1:10,0:9:5.93:17,0,6	1/1:20,2:21:21.86:264,22,0	1/1:15,1:16:9.94:204,10,0	1/1:21,0:21:44.37:303,44,0	0/1:21,1:22:12.13:43,0,12	0/1:9,0:9:2.64:19,0,3	1/1:2,15:17:40.20:371,40,0	1/1:0,15:15:41.61:372,42,0	1/1:15,0:15:2.91:130,3,0	1/1:10,1:11:27.74:197,28,0	0/1:7,2:9:1.95:52,0,2	1/1:25,0:25:34.93:327,35,0	1/1:24,1:25:68.17:514,68,0	1/1:16,0:16:44.38:300,44,0	1/1:12,1:14:29.08:243,29,0	0/1:11,0:11:8.14:13,0,8	1/1:7,1:7:5.65:64,6,0	1/1:8,2:10:10.90:76,11,0	1/1:13,2:15:32.93:256,33,0	1/1:11,0:11:26.81:201,27,0	1/1:7,0:7:9.28:70,9,0	1/1:5,15:20:34.99:408,35,0	1/1:14,2:15:14.21:202,14,0	0/1:20,1:19:3.58:134,0,4	0/1:6,1:7:1.40:62,0,1
chr10	91354582	.	AAT	A	5175.01	PASS	AB=0.948;AC=37;AF=0.661;AN=56;BaseQRankSum=2.239;DP=413;FS=9.581;HRun=0;HaplotypeScore=163.6382;InbreedingCoeff=0.0119;MQ=56.46;MQ0=1;MQRankSum=-1.823;QD=13.99;ReadPosRankSum=2.670;VQSLOD=4.4631;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:17:34.19:297,34,0	1/1:0,0:2:6.01:58,6,0	0/1:18,0:10:50.92:51,0,85	0/1:9,1:9:5.62:6,0,63	0/1:21,1:21:97.92:187,0,98	1/1:2,14:16:9.70:340,10,0	1/1:10,9:21:44.53:431,45,0	0/0:22,0:22:16.58:0,17,217	0/0:7,0:10:18.88:0,19,113	0/1:20,1:21:50.05:164,0,50	1/1:16,0:16:38.71:221,39,0	0/1:14,0:14:87.22:93,0,87	1/1:6,4:11:28.10:262,28,0	0/1:9,0:9:51.41:51,0,78	1/1:0,0:24:39.56:417,40,0	1/1:9,12:23:67.23:747,67,0	1/1:10,1:16:44.54:349,45,0	1/1:8,5:14:25.25:301,25,0	0/0:11,0:11:8.64:0,9,148	0/1:8,0:7:12.94:13,0,58	0/1:11,0:11:10.98:11,0,49	1/1:2,13:15:35.46:395,35,0	1/1:4,5:10:26.92:310,27,0	0/1:3,4:7:2.60:138,0,3	0/1:18,2:20:1.03:186,0,1	0/1:16,0:15:62.90:63,0,79	0/1:19,1:19:67.40:67,0,189	0/1:8,0:8:17.68:18,0,75
chr10	91354756	.	CT	C	1510.80	PASS	AB=0.828;AC=32;AF=0.571;AN=56;BaseQRankSum=-2.427;DP=381;FS=7.760;HRun=16;HaplotypeScore=92.0517;InbreedingCoeff=0.0691;MQ=49.23;MQ0=5;MQRankSum=2.226;QD=5.07;ReadPosRankSum=1.628;VQSLOD=2.2841;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:25:41.20:0,41,225	0/0:6,0:8:15.77:0,16,89	0/0:7,0:1:0:0,0,0	0/0:3,0:2:2.84:0,3,14	0/1:9,2:11:15.86:16,0,17	1/1:14,5:19:18.41:129,18,0	1/1:8,8:16:22.52:132,23,0	0/1:19,4:23:30.23:85,0,30	0/1:7,0:7:8.82:47,0,9	1/1:14,6:20:24.96:138,25,0	0/1:10,1:12:35.41:35,0,47	1/1:12,2:14:15.06:91,15,0	0/1:7,2:9:7.44:65,0,7	0/1:7,1:8:15.04:24,0,15	0/0:13,0:13:20.79:0,21,117	1/1:1,4:5:2.94:18,3,0	0/0:23,0:24:18.65:0,19,154	1/1:9,5:13:20.98:117,21,0	0/1:9,6:13:4.63:86,0,5	0/1:19,3:21:5.40:45,0,5	0/1:6,2:8:22.47:28,0,22	1/1:6,7:14:23.90:137,24,0	1/1:10,4:14:23.16:136,23,0	0/1:6,9:16:18.42:71,0,18	0/1:9,5:14:26.54:74,0,27	1/1:11,3:14:5.44:87,5,0	0/1:11,2:12:36.42:36,0,49	1/1:2,5:6:14.70:90,15,0
chr10	91354842	.	C	CT	1564.45	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-4.911;DP=495;FS=4.103;HRun=9;HaplotypeScore=58.2351;InbreedingCoeff=0.9593;MQ=75.11;MQ0=4;MQRankSum=-1.023;QD=23.01;ReadPosRankSum=2.348;VQSLOD=4.7141;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:26:69.17:753,69,0	1/1:1,7:8:15.04:166,15,0	0/0:38,0:20:25.03:0,25,215	0/0:27,0:19:7.22:0,7,147	0/0:27,0:27:65.95:0,66,570	0/0:12,0:12:29.99:0,30,260	0/0:15,0:15:32.94:0,33,283	0/0:33,0:33:59.78:0,60,517	0/0:12,0:12:35.94:0,36,304	0/0:17,0:17:41.99:0,42,364	0/0:18,0:18:44.98:0,45,388	0/0:14,0:14:14.32:0,14,264	0/0:13,0:13:29.96:0,30,256	0/0:14,0:14:35.98:0,36,312	1/1:2,14:16:33.09:365,33,0	0/0:13,0:13:35.99:0,36,312	1/1:1,17:18:19.12:438,19,0	0/0:13,0:13:35.97:0,36,309	0/0:13,0:13:32.99:0,33,286	0/0:24,0:24:59.96:0,60,517	0/0:13,0:13:32.97:0,33,283	0/0:8,0:8:20.97:0,21,177	0/0:18,0:18:41.97:0,42,364	0/0:8,0:8:14.94:0,15,123	0/0:13,0:14:41.03:0,41,344	0/0:24,0:24:56.94:0,57,492	0/0:20,0:19:56.98:0,57,494	0/0:19,0:19:56.94:0,57,484
chr10	91355154	.	AC	A	15953.58	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.700;DP=630;FS=15.047;HRun=6;HaplotypeScore=67.3788;InbreedingCoeff=0.9990;MQ=78.29;MQ0=0;MQRankSum=-8.625;QD=27.32;ReadPosRankSum=6.464;VQSLOD=3.4844;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:84.21:902,84,0	1/1:1,10:11:33.08:349,33,0	0/0:18,0:18:43.70:0,44,584	0/0:28,0:26:70.22:0,70,788	1/1:3,16:19:41.95:451,42,0	1/1:2,13:15:39.10:419,39,0	1/1:3,19:22:57.14:612,57,0	1/1:7,26:33:66.14:700,66,0	1/1:1,20:21:54.14:579,54,0	1/1:2,29:31:81.19:862,81,0	1/1:1,14:15:36.09:386,36,0	1/1:2,22:24:54.14:580,54,0	1/1:1,12:13:30.08:322,30,0	1/1:4,28:32:84.21:900,84,0	1/1:2,24:26:66.15:702,66,0	1/1:2,25:27:72.18:774,72,0	1/1:0,25:25:63.16:677,63,0	1/1:2,27:29:75.19:806,75,0	1/1:3,18:22:53.16:553,53,0	1/1:1,23:24:69.17:737,69,0	1/1:1,33:34:96.24:1031,96,0	1/1:0,12:12:30.08:322,30,0	1/1:2,21:23:60.15:645,60,0	1/1:2,27:29:69.17:742,69,0	1/1:0,14:14:36.09:387,36,0	1/1:2,20:22:60.15:645,60,0	1/1:1,18:19:48.12:515,48,0	1/1:0,11:11:33.08:355,33,0
chr10	91355830	.	T	TTTTGTTTG	9032.87	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=-1.527;DP=545;FS=14.028;HRun=0;HaplotypeScore=153.5726;InbreedingCoeff=0.6891;MQ=52.67;MQ0=6;MQRankSum=0.225;QD=21.20;ReadPosRankSum=2.632;VQSLOD=3.8141;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:25:1.25:0,1,3	0/0:7,0:10:15.49:0,15,188	0/0:29,0:17:17.85:0,18,296	0/0:23,0:14:14.81:0,15,315	1/1:22,0:25:48.50:436,48,0	1/1:22,0:19:27.09:619,27,0	1/1:17,0:17:30.96:725,31,0	0/1:22,0:21:20.89:194,0,21	1/1:12,0:16:29.59:283,30,0	1/1:32,0:29:57.14:1604,57,0	1/1:10,0:9:12.04:253,12,0	1/1:2,0:12:2.22:7,2,0	1/1:6,10:17:3.01:122,3,0	1/1:14,0:18:38.18:343,38,0	0/0:8,0:12:5.96:0,6,45	1/1:19,2:20:45.02:1265,45,0	0/0:10,0:19:8.65:0,9,110	1/1:11,0:9:5.94:41,6,0	1/1:28,0:25:26.96:272,27,0	1/1:16,0:16:29.72:221,30,0	1/1:19,0:18:31.63:242,32,0	1/1:18,2:20:33.04:696,33,0	1/1:4,9:14:9:170,9,0	1/1:31,1:31:33.02:749,33,0	1/1:9,9:18:6.02:131,6,0	1/1:21,0:21:35.91:304,36,0	1/1:22,0:22:33.62:318,34,0	1/1:13,0:13:5.79:36,6,0
chr10	91355842	.	GTTT	G	469.13	PASS	AB=0.909;AC=7;AF=0.125;AN=56;BaseQRankSum=4.828;DP=533;FS=0.830;HRun=3;HaplotypeScore=145.4603;InbreedingCoeff=0.5308;MQ=45.98;MQ0=11;MQRankSum=-4.594;QD=7.11;ReadPosRankSum=2.053;VQSLOD=0.0750;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:18.20:45,0,18	1/1:6,4:10:20.26:245,20,0	0/0:20,0:10:27.08:0,27,522	0/0:21,0:11:27.08:0,27,589	0/0:26,0:26:52.27:0,52,1083	0/0:22,0:19:35.64:0,36,695	0/0:21,0:19:48.11:0,48,948	0/0:23,0:22:64.05:0,64,1017	0/0:17,0:17:42.11:0,42,744	0/0:31,0:28:84.21:0,84,1577	0/0:10,0:9:24.05:0,24,448	0/0:16,0:16:15.03:0,15,205	0/0:16,0:16:12.92:0,13,182	0/0:15,0:15:42.13:0,42,799	0/1:5,3:8:13.59:77,0,14	0/0:21,0:20:54.17:0,54,1023	1/1:14,2:16:20.23:235,20,0	0/0:8,0:6:12.04:0,12,221	0/0:27,0:26:78.18:0,78,1167	0/0:19,0:18:41.63:0,42,811	0/0:24,0:20:45.61:0,46,840	0/0:24,0:24:56.83:0,57,958	0/0:14,0:14:13.84:0,14,183	0/0:35,0:34:72.83:0,73,1169	0/1:19,0:19:3.04:3,0,370	0/0:23,0:22:63.17:0,63,1030	0/0:21,0:20:35.03:0,35,922	0/0:12,0:12:15.02:0,15,214
chr10	91355847	.	T	TTTGT	9420.84	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-2.205;DP=539;FS=11.967;HRun=0;HaplotypeScore=135.7316;InbreedingCoeff=0.7109;MQ=44.30;MQ0=15;MQRankSum=-0.363;QD=20.89;ReadPosRankSum=-0.646;VQSLOD=3.9625;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:3.08:0,3,10	0/0:10,0:10:15.32:0,15,114	0/0:16,0:8:17.79:0,18,227	0/0:18,0:9:14.92:0,15,231	1/1:28,0:28:49.26:958,49,0	1/1:24,0:21:11.72:232,12,0	1/1:21,0:19:19.36:337,19,0	1/1:21,0:20:2.37:456,2,0	1/1:19,0:17:24.68:621,25,0	1/1:27,0:24:4.91:626,5,0	1/1:11,0:9:10.39:129,10,0	1/1:15,0:15:3.95:58,4,0	1/1:17,0:17:6.16:65,6,0	1/1:19,0:18:39.12:800,39,0	0/0:11,0:11:3.77:0,4,33	1/1:24,0:23:45.58:632,46,0	0/0:19,0:18:7.82:0,8,46	1/1:8,0:6:5.94:41,6,0	1/1:22,0:20:27.06:518,27,0	1/1:19,0:17:30.02:547,30,0	1/1:25,0:20:31.32:576,31,0	1/1:24,0:24:36.18:444,36,0	1/1:13,0:13:8.96:93,9,0	1/1:37,0:34:32.04:380,32,0	1/1:18,0:18:3.48:40,3,0	1/1:22,0:21:36.09:812,36,0	1/1:25,0:23:44.98:924,45,0	1/1:4,7:12:6.02:132,6,0
chr10	91355851	.	TTTG	T	1589.99	PASS	AB=0.985;AC=24;AF=0.429;AN=56;BaseQRankSum=6.820;DP=551;FS=9.272;HRun=0;HaplotypeScore=154.8698;InbreedingCoeff=-0.1901;MQ=43.37;MQ0=16;MQRankSum=-4.270;QD=3.78;ReadPosRankSum=1.061;VQSLOD=2.0676;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:5.33:39,5,0	1/1:6,5:11:23.91:313,24,0	0/0:12,0:8:20.94:0,21,373	0/0:16,0:8:21.07:0,21,397	0/1:28,0:28:42.05:42,0,245	0/1:25,0:22:69.95:189,0,70	0/1:22,0:20:99:126,0,137	0/0:24,0:23:55.63:0,56,638	0/1:21,0:18:15.34:15,0,263	0/1:27,0:24:99:101,0,444	0/1:12,0:10:25.43:25,0,60	0/0:15,0:15:8.50:0,8,67	0/1:18,0:17:4.45:4,0,36	0/1:19,0:18:1.41:1,0,297	0/1:9,4:13:31.07:78,0,31	0/1:23,0:22:52.73:106,0,53	1/1:18,3:19:14.32:264,14,0	0/0:6,0:4:0.89:0,1,2	0/0:21,0:19:43.44:0,43,604	0/1:22,0:20:51.80:52,0,240	0/0:24,0:19:37.55:0,38,318	0/1:28,0:28:44.59:98,0,45	1/1:15,0:15:5.57:30,6,0	0/1:36,0:34:99:125,0,113	0/1:18,0:18:27.49:27,0,78	0/1:23,0:22:20.53:21,0,486	0/1:24,0:22:99:101,0,290	0/0:11,0:11:11.94:0,12,107
chr10	91355854	.	G	GTGTGTGT	5735.59	PASS	AB=0.956;AC=41;AF=0.732;AN=56;BaseQRankSum=3.362;DP=558;FS=28.409;HRun=0;HaplotypeScore=189.9995;InbreedingCoeff=0.1536;MQ=41.89;MQ0=19;MQRankSum=2.828;QD=10.95;ReadPosRankSum=1.564;VQSLOD=2.4341;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:14:0.28:0,0,15	1/1:9,0:11:15.07:213,15,0	0/0:10,0:6:17.84:0,18,193	0/0:13,0:6:14.94:0,15,190	1/1:22,0:28:34.54:277,35,0	1/1:19,0:24:7.87:602,8,0	1/1:21,0:19:29.36:354,29,0	0/1:30,0:30:99:219,0,350	1/1:19,0:18:21.45:289,21,0	0/1:26,0:25:99:348,0,206	1/1:8,0:7:9.50:102,9,0	0/1:16,0:16:16.81:57,0,17	0/1:18,0:18:3.54:120,0,4	0/1:19,0:20:30.92:135,0,31	1/1:14,0:14:5.96:150,6,0	1/1:17,1:25:13.15:554,13,0	1/1:18,0:20:20.35:236,20,0	1/1:5,0:5:8.94:66,9,0	0/1:21,0:19:83.42:83,0,281	1/1:18,0:19:19.55:173,20,0	1/1:23,0:20:0.65:30,1,0	1/1:21,0:28:30.31:352,30,0	1/1:14,0:15:12.04:220,12,0	1/1:27,0:30:18.84:435,19,0	0/1:15,0:16:3.31:163,0,3	0/1:23,0:23:99:203,0,120	1/1:19,0:21:20.02:353,20,0	0/0:11,0:11:1.76:0,2,60
chr10	91355856	.	T	TTG	4561.85	PASS	AB=0.988;AC=27;AF=0.482;AN=56;BaseQRankSum=2.191;DP=559;FS=11.423;HRun=0;HaplotypeScore=156.3242;InbreedingCoeff=-0.2817;MQ=40.05;MQ0=20;MQRankSum=0.573;QD=9.41;ReadPosRankSum=1.459;VQSLOD=4.1486;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:1.51:6,2,0	0/0:11,0:11:21.47:0,21,194	0/0:7,0:4:12.04:0,12,183	0/0:13,0:6:15.05:0,15,231	0/1:28,0:28:15.73:518,0,16	0/1:26,0:24:53.07:53,0,77	0/1:19,0:17:99:111,0,99	0/1:30,0:30:99:211,0,256	0/1:20,0:17:0.18:308,0,0	0/1:31,0:27:99:315,0,161	1/1:9,0:7:8.95:72,9,0	0/1:16,0:16:5.96:31,0,6	0/1:20,0:19:22.10:22,0,40	0/1:21,0:20:6.91:432,0,7	0/0:14,0:14:0.58:0,1,61	1/1:27,0:26:31.62:336,32,0	0/0:22,0:20:0.62:0,1,63	0/0:7,0:5:2.46:0,2,18	0/1:22,0:20:99:230,0,169	0/1:16,1:15:18.98:252,0,19	0/1:27,1:20:14.19:285,0,14	1/1:28,0:28:24.64:225,25,0	1/1:15,0:15:0.26:32,0,0	0/1:34,0:31:1.59:152,0,2	0/1:17,0:17:12.95:13,0,21	0/1:24,2:25:99:372,0,154	0/1:22,0:20:50.65:513,0,51	0/1:10,0:10:33.51:71,0,34
chr10	91355974	.	G	GGTCCGCCC	6465.40	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-2.027;DP=624;FS=50.321;HRun=0;HaplotypeScore=154.3432;InbreedingCoeff=0.9973;MQ=60.68;MQ0=2;MQRankSum=-11.535;QD=76.06;ReadPosRankSum=-1.784;VQSLOD=2.9572;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,11:29:39.05:1354,39,0	1/1:4,2:7:18.06:601,18,0	0/0:20,0:20:51.18:0,51,1313	0/0:32,0:28:44.07:0,44,1406	0/0:18,0:18:54.19:0,54,1528	0/0:19,0:18:48.15:0,48,1293	0/0:30,0:30:90.31:0,90,2512	0/0:28,0:28:69.20:0,69,1816	0/0:22,0:22:63.22:0,63,1780	0/0:21,0:21:60.21:0,60,1622	0/0:14,0:14:42.14:0,42,1189	0/0:25,0:23:63.22:0,63,1698	0/0:28,0:28:72.20:0,72,1973	0/0:28,0:28:75.26:0,75,2115	1/1:8,18:28:69.24:2856,69,0	0/0:30,0:30:81.28:0,81,2207	1/1:11,8:21:39.13:1654,39,0	0/0:19,0:18:51.18:0,51,1444	0/0:20,0:20:57.20:0,57,1568	0/0:10,0:10:27.09:0,27,758	0/0:33,0:33:84.29:0,84,2376	0/0:17,0:17:51.18:0,51,1429	0/0:14,0:12:36.12:0,36,949	0/0:39,0:38:90.31:0,90,2545	0/0:23,0:23:69.24:0,69,1953	0/0:19,0:19:54.19:0,54,1490	0/0:19,0:19:54.19:0,54,1528	0/0:11,0:11:33.11:0,33,934
chr10	91358773	.	AAC	A	295.17	PASS	AB=1.000;AC=20;AF=0.500;AN=40;BaseQRankSum=4.478;DP=536;FS=5.843;HRun=0;HaplotypeScore=90.8334;InbreedingCoeff=0.4993;MQ=54.64;MQ0=19;MQRankSum=-0.927;QD=1.34;ReadPosRankSum=3.162;VQSLOD=0.8632;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:11,0:11:3.48:32,3,0	0/0:27,0:24:8.76:0,9,88	0/0:13,0:12:2.99:0,3,23	./.	1/1:14,8:22:5.80:62,6,0	0/0:21,0:20:22.40:0,22,197	0/0:10,0:8:2.99:0,3,24	1/1:13,6:19:3.01:31,3,0	0/0:15,0:15:20.01:0,20,173	1/1:11,4:16:5.75:44,6,0	1/1:40,0:38:14.12:70,14,0	./.	1/1:23,0:23:2.84:14,3,0	0/0:11,0:17:3:0,3,26	./.	./.	1/1:40,1:38:8.08:82,8,0	0/0:15,0:24:2.46:0,2,25	0/0:9,0:9:8.47:0,8,67	0/0:32,0:32:17.90:0,18,194	0/1:12,0:13:22.19:22,0,42	0/1:18,0:18:0:0,0,0	1/1:7,1:9:5.79:45,6,0	1/1:6,0:6:4.42:34,4,0
chr10	91358805	.	CACACACACACACACACACACACACACACAG	C	2061.29	PASS	AB=0.977;AC=6;AF=0.107;AN=56;BaseQRankSum=0.615;DP=559;FS=7.750;HRun=0;HaplotypeScore=306.5083;InbreedingCoeff=0.5173;MQ=48.32;MQ0=56;MQRankSum=-1.423;QD=20.21;ReadPosRankSum=-3.654;VQSLOD=0.8299;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:30:68.51:294,0,69	1/1:5,0:5:6.01:77,6,0	0/0:5,0:2:3.01:0,3,58	0/0:11,0:4:12.02:0,12,202	0/0:15,0:15:27.56:0,28,2039	0/0:29,0:23:51.04:0,51,3625	0/0:18,0:17:39.55:0,40,2578	0/0:18,0:14:38.27:0,38,1112	0/0:21,0:20:35.15:0,35,2683	0/0:19,0:17:50.54:0,51,4604	0/0:14,0:10:15.48:0,15,925	0/0:21,0:19:36.59:0,37,2826	0/0:19,0:18:46.05:0,46,4191	0/0:18,0:17:22.43:0,22,1443	1/1:17,26:39:19.61:1338,20,0	0/0:12,0:12:24.12:0,24,1529	0/1:20,1:20:99:480,0,283	0/0:24,0:21:30.59:0,31,2894	0/0:10,0:7:21.07:0,21,1627	0/0:10,0:9:15.52:0,16,1380	0/0:46,0:38:75.20:0,75,5770	0/0:26,0:24:29.54:0,30,2310	0/0:11,0:11:29.65:0,30,2801	0/0:37,0:34:63.27:0,63,5475	0/0:16,0:12:27.08:0,27,1906	0/0:28,0:27:79.86:0,80,5069	0/0:14,0:12:33.02:0,33,2345	0/0:13,0:13:32.85:0,33,2712
chr10	91359944	.	C	CT	5808.21	PASS	AB=0.603;AC=24;AF=0.429;AN=56;BaseQRankSum=-4.157;DP=589;FS=2.539;HRun=11;HaplotypeScore=73.2348;InbreedingCoeff=0.5612;MQ=73.54;MQ0=0;MQRankSum=-2.633;QD=18.09;ReadPosRankSum=2.962;VQSLOD=6.0393;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,24:39:35.66:545,0,36	1/1:1,7:8:0.81:190,1,0	0/0:17,0:18:7.02:0,7,141	0/0:12,0:12:10.34:0,10,84	0/0:23,0:23:44.67:0,45,335	1/1:2,20:23:53.93:525,54,0	1/1:3,19:22:24.86:434,25,0	0/0:39,0:39:80.63:0,81,622	0/0:20,0:20:41.77:0,42,323	1/1:4,17:22:48.80:466,49,0	0/1:7,11:18:29.15:257,0,29	0/0:20,0:20:44.77:0,45,348	1/1:2,13:15:6.82:251,7,0	0/0:19,1:22:18.38:0,18,306	1/1:4,21:26:50.94:502,51,0	1/1:4,16:20:45.09:457,45,0	1/1:5,28:33:69.14:700,69,0	0/1:9,18:27:15.59:403,0,16	0/0:19,0:20:34.38:0,34,247	0/0:18,0:18:41.78:0,42,320	0/0:21,1:23:19.35:0,19,318	0/1:4,5:9:2.34:137,0,2	1/1:4,16:21:24.69:418,25,0	0/1:5,12:16:0.17:269,0,0	0/1:5,16:21:29.10:256,0,29	0/0:18,0:20:45.85:0,46,330	0/0:19,1:22:15.41:0,15,276	0/0:11,0:11:29.85:0,30,228
chr10	91360638	.	C	CT	4766.28	PASS	AB=0.716;AC=42;AF=0.750;AN=56;BaseQRankSum=-0.275;DP=601;FS=6.070;HRun=14;HaplotypeScore=87.1612;InbreedingCoeff=0.5226;MQ=63.17;MQ0=7;MQRankSum=-1.887;QD=9.61;ReadPosRankSum=-1.458;VQSLOD=3.8312;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:39:51.90:0,52,332	0/1:7,2:9:32.12:32,0,74	0/0:14,0:11:0.86:0,1,17	0/0:9,0:9:8.43:0,8,45	1/1:17,18:35:12.74:231,13,0	1/1:4,1:25:40.36:203,40,0	1/1:4,0:9:15.56:78,16,0	0/1:23,17:40:24.43:302,0,24	0/1:9,11:20:14.54:135,0,15	1/1:12,2:23:30.54:170,31,0	1/1:6,1:24:23.86:199,24,0	1/1:6,16:21:32.97:284,33,0	1/1:8,2:20:16.97:89,17,0	1/1:3,6:10:12.31:94,12,0	0/0:16,0:18:10.73:0,11,63	1/1:8,1:24:34.36:185,34,0	0/0:23,0:25:46.34:0,46,293	1/1:5,2:27:38.30:212,38,0	1/1:15,10:25:38.37:306,38,0	1/1:10,14:24:22.65:315,23,0	0/1:5,4:8:9.94:44,0,10	1/1:7,1:12:9.62:57,10,0	1/1:9,2:17:20.04:111,20,0	1/1:5,0:8:8.52:43,9,0	1/1:3,4:16:37.52:226,38,0	1/1:11,19:30:51.85:424,52,0	1/1:11,17:29:37.83:420,38,0	1/1:3,25:29:71.67:607,72,0
chr10	91362383	.	TC	T	5497.34	PASS	AB=0.765;AC=44;AF=0.786;AN=56;BaseQRankSum=-3.032;DP=246;FS=6.724;HRun=1;HaplotypeScore=43.8830;InbreedingCoeff=0.5573;MQ=58.13;MQ0=3;MQRankSum=3.685;QD=29.72;ReadPosRankSum=0.269;VQSLOD=3.9866;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:14:42.12:0,42,580	0/0:2,0:2:6.02:0,6,89	0/0:14,0:5:3.27:0,3,66	0/1:14,0:6:1.99:2,0,35	1/1:1,10:11:27.07:338,27,0	1/1:0,14:14:30.10:410,30,0	1/1:0,6:6:12.04:167,12,0	1/1:1,22:23:62.85:787,63,0	1/1:0,4:4:9.03:126,9,0	0/1:1,8:9:10.27:307,0,10	1/1:0,4:3:6.02:69,6,0	1/1:0,4:4:12:145,12,0	1/1:0,3:3:6.02:84,6,0	1/1:0,4:4:6.02:83,6,0	0/0:4,0:4:12.01:0,12,139	1/1:0,1:1:3.01:42,3,0	0/0:25,0:24:63.21:0,63,902	1/1:4,20:24:72.22:969,72,0	1/1:11,4:13:36.05:447,36,0	1/1:0,1:1:3.01:41,3,0	1/1:0,4:4:5.99:57,6,0	1/1:1,0:1:2.98:21,3,0	1/1:0,3:3:5.98:62,6,0	1/1:0,2:2:3.01:42,3,0	1/1:0,8:8:24.08:328,24,0	1/1:0,13:13:39.13:537,39,0	1/1:0,7:7:15.02:184,15,0	1/1:0,10:10:18.06:249,18,0
chr10	91362386	.	T	TA	553.43	PASS	AB=0.972;AC=14;AF=0.250;AN=56;BaseQRankSum=-3.531;DP=271;FS=0.775;HRun=12;HaplotypeScore=79.4679;InbreedingCoeff=0.4567;MQ=60.47;MQ0=3;MQRankSum=-2.843;QD=5.48;ReadPosRankSum=0.722;VQSLOD=2.1618;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,7:15:18.44:160,18,0	1/1:2,1:3:3:29,3,0	0/1:13,1:7:12.17:12,0,42	0/1:14,0:6:0:0,0,0	0/0:14,0:14:17.20:0,17,122	0/0:15,0:15:32.58:0,33,218	0/0:8,0:8:13.08:0,13,82	0/0:22,0:22:10.93:0,11,255	0/0:4,0:4:8.86:0,9,57	0/0:11,0:11:23.70:0,24,161	0/0:6,0:5:1.93:0,2,6	0/0:6,0:6:11.22:0,11,66	0/0:4,0:4:8.89:0,9,60	0/0:3,0:3:5.84:0,6,34	1/1:0,2:2:3:29,3,0	0/0:1,0:1:2.94:0,3,18	1/1:7,19:25:29.18:445,29,0	0/0:25,0:27:50.39:0,50,361	0/1:18,0:16:17.70:18,0,49	0/1:1,0:1:0:0,0,0	1/1:3,0:4:1.55:4,2,0	0/0:2,0:2:2.93:0,3,18	0/0:3,0:3:2.96:0,3,19	0/0:1,0:2:2.54:0,3,19	0/0:11,0:11:20.06:0,20,132	0/0:14,0:14:32.63:0,33,225	0/0:6,0:6:11.85:0,12,79	0/0:9,0:10:17.03:0,17,105
chr10	91362415	.	CTG	C	1904.43	PASS	AB=0.846;AC=39;AF=0.813;AN=48;BaseQRankSum=-1.708;DP=287;FS=5.751;HRun=0;HaplotypeScore=99.4806;InbreedingCoeff=0.6089;MQ=62.27;MQ0=6;MQRankSum=1.265;QD=9.52;ReadPosRankSum=-1.256;VQSLOD=2.8614;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:10.40:0,10,65	0/0:5,0:6:5.37:0,5,35	./.	0/0:14,0:6:3.45:0,3,23	1/1:7,0:15:8.52:42,9,0	1/1:5,6:11:15.51:172,16,0	1/1:8,4:13:15.03:161,15,0	1/1:17,0:20:8.43:40,8,0	1/1:2,0:4:5.68:28,6,0	1/1:8,4:12:18.02:186,18,0	1/1:3,2:5:6.02:68,6,0	1/1:0,0:7:8.52:42,9,0	./.	1/1:2,0:4:5.68:28,6,0	./.	./.	0/0:24,0:25:29.87:0,30,180	1/1:15,9:25:35.90:375,36,0	1/1:6,0:13:18.86:89,19,0	1/1:0,0:4:2.84:14,3,0	0/1:9,0:10:0:0,0,0	1/1:0,2:2:3.01:34,3,0	1/1:0,9:9:24.05:263,24,0	1/1:1,2:3:6:58,6,0	1/1:4,10:16:24.07:272,24,0	1/1:7,1:12:19.99:102,20,0	1/1:1,0:4:5.68:28,6,0	1/1:4,0:8:8.52:42,9,0
chr10	91362453	.	GCGCGTGCGCGCACA	G	872.37	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=1.457;DP=302;FS=23.175;HRun=0;HaplotypeScore=152.3876;InbreedingCoeff=0.6733;MQ=51.85;MQ0=5;MQRankSum=-4.762;QD=18.17;ReadPosRankSum=0.797;VQSLOD=1.3530;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,2:17:6.02:123,6,0	1/1:6,0:6:5.70:207,6,0	0/0:3,0:1:3.01:0,3,49	0/0:5,0:3:7.68:0,8,40	0/0:11,0:11:14.63:0,15,493	0/0:11,0:11:24.08:0,24,1246	0/0:24,0:24:51.18:0,51,2687	0/0:17,0:17:42.54:0,43,1828	0/0:3,0:3:6.02:0,6,183	0/0:11,0:10:27.55:0,28,926	0/0:3,0:3:9.03:0,9,509	0/0:12,0:12:21.07:0,21,945	0/0:4,0:3:9.03:0,9,373	0/0:8,0:8:15.05:0,15,682	./.	0/0:2,0:2:0.47:0,0,1	1/1:20,4:22:21.63:666,22,0	0/0:23,0:23:60.21:0,60,3594	0/0:15,0:13:36.12:0,36,1526	0/0:4,0:4:3.01:0,3,79	0/0:14,0:14:17.98:0,18,953	0/0:7,0:7:15.05:0,15,936	0/0:14,0:14:36.12:0,36,2125	0/0:9,0:9:24.08:0,24,1319	0/0:16,0:16:33.11:0,33,1688	0/0:16,0:13:36.12:0,36,1762	0/0:11,0:11:30.07:0,30,1492	0/0:4,0:4:9.03:0,9,243
chr10	91362455	.	GCGTGCGCGCACA	G	896.45	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=2.030;DP=311;FS=18.657;HRun=0;HaplotypeScore=145.9762;InbreedingCoeff=0.6899;MQ=54.23;MQ0=4;MQRankSum=-5.046;QD=17.93;ReadPosRankSum=-0.144;VQSLOD=1.4409;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:18:6.02:138,6,0	1/1:2,4:6:7.84:221,8,0	0/0:3,0:1:3.01:0,3,48	0/0:6,0:4:10.07:0,10,103	0/0:11,0:11:14.37:0,14,379	0/0:12,0:12:27.09:0,27,1144	0/0:22,0:22:48.94:0,49,2298	0/0:19,0:19:48.60:0,49,1793	0/0:3,0:3:6.02:0,6,131	0/0:11,0:10:13.34:0,13,745	0/0:3,0:3:9.03:0,9,463	0/0:12,0:12:21.07:0,21,786	0/0:4,0:3:9.03:0,9,319	0/0:8,0:8:15.03:0,15,564	./.	0/0:2,0:2:1.25:0,1,3	1/1:24,1:23:25.89:663,26,0	0/0:23,0:23:63.22:0,63,3253	0/0:16,0:14:42.09:0,42,1358	0/0:4,0:4:3.01:0,3,65	0/0:14,0:14:17.98:0,18,817	0/0:7,0:7:15.05:0,15,818	0/0:14,0:14:36.12:0,36,1842	0/0:11,0:11:27.09:0,27,1224	0/0:15,0:15:33.11:0,33,1476	0/0:16,0:14:35.12:0,35,1553	0/0:12,0:12:29.31:0,29,1247	0/0:5,0:5:12.04:0,12,274
chr10	91362457	.	GTGCGCGCACA	G	826.01	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=2.708;DP=310;FS=21.374;HRun=0;HaplotypeScore=134.6633;InbreedingCoeff=0.5800;MQ=54.26;MQ0=4;MQRankSum=-5.426;QD=13.54;ReadPosRankSum=-0.632;VQSLOD=1.1397;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,12:18:6.02:174,6,0	1/1:6,0:6:9.03:190,9,0	0/0:3,0:1:3.01:0,3,42	0/0:6,0:4:9.30:0,9,119	0/0:11,0:11:14.71:0,15,386	0/0:13,0:13:26.68:0,27,1107	0/0:20,0:20:51.18:0,51,2296	0/0:19,0:19:48.54:0,49,1739	0/0:3,0:3:6.02:0,6,98	0/1:11,0:10:9.18:9,0,703	0/0:4,0:4:12.04:0,12,491	0/0:12,0:12:21.06:0,21,723	0/0:4,0:3:9.03:0,9,373	0/0:8,0:8:13.55:0,14,510	./.	0/0:2,0:2:0.89:0,1,2	1/1:23,2:23:28.51:584,29,0	0/0:23,0:23:63.22:0,63,3032	0/0:16,0:14:42.02:0,42,1302	0/0:4,0:4:3.01:0,3,33	0/0:14,0:14:18.04:0,18,841	0/0:8,0:8:18.06:0,18,843	0/0:14,0:14:36.12:0,36,1763	0/0:11,0:11:27.09:0,27,1207	0/0:14,0:14:32.78:0,33,1381	0/0:16,0:14:42.07:0,42,1505	0/0:12,0:12:3.88:0,4,1220	0/0:4,0:4:12.04:0,12,273
chr10	91362463	.	GCA	G	186.31	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=5.133;DP=318;FS=32.746;HRun=0;HaplotypeScore=95.3886;InbreedingCoeff=0.7189;MQ=61.25;MQ0=2;MQRankSum=-4.221;QD=4.23;ReadPosRankSum=-0.042;VQSLOD=1.0232;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,2:16:5.97:48,6,0	1/1:4,0:4:5.90:36,6,0	0/0:3,0:2:2.37:0,2,8	0/0:7,0:5:9.44:0,9,112	0/0:10,0:10:18.05:0,18,262	0/0:14,0:14:30.07:0,30,468	0/0:22,0:22:57.15:0,57,947	0/0:18,0:18:45.09:0,45,706	0/0:5,0:5:15.02:0,15,202	0/0:10,0:10:18.05:0,18,288	0/0:4,0:4:12.03:0,12,179	0/0:13,0:13:24.07:0,24,385	0/0:4,0:3:9.03:0,9,163	0/0:9,0:9:14.97:0,15,242	./.	0/1:3,0:3:0:0,0,0	1/1:16,5:19:29.32:225,29,0	0/0:22,0:22:63.22:0,63,1121	0/0:16,0:15:45.14:0,45,741	0/0:4,0:4:3.01:0,3,32	0/0:17,0:17:27.02:0,27,445	0/0:10,0:10:24.07:0,24,402	0/0:15,0:15:39.11:0,39,668	0/0:12,0:12:30.09:0,30,503	0/0:13,0:13:30.09:0,30,495	0/0:19,0:18:54.14:0,54,840	0/0:16,0:16:39.11:0,39,641	0/0:4,0:4:9.03:0,9,160
chr10	91374803	.	A	AC	6327.70	PASS	AB=1.000;AC=52;AF=0.929;AN=56;BaseQRankSum=-0.643;DP=249;FS=0.000;HRun=3;HaplotypeScore=141.5849;InbreedingCoeff=0.1767;MQ=62.49;MQ0=0;MQRankSum=-3.548;QD=25.72;ReadPosRankSum=3.323;VQSLOD=4.2360;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,1:13:30.06:308,30,0	1/1:1,1:2:6.02:71,6,0	0/1:6,0:5:23.58:24,0,99	0/1:6,0:4:10.98:11,0,77	1/1:5,1:6:9.70:128,10,0	1/1:7,1:8:20.90:230,21,0	1/1:14,0:14:36.07:360,36,0	1/1:12,1:13:33.04:315,33,0	1/1:15,0:14:42.08:425,42,0	1/1:9,0:9:27.05:277,27,0	0/0:2,1:3:0.47:0,0,1	1/1:19,2:21:63.14:659,63,0	1/1:12,0:12:36.07:358,36,0	1/1:9,2:11:30.07:321,30,0	1/1:10,0:10:30.06:300,30,0	1/1:14,0:14:39.06:381,39,0	1/1:5,1:6:15.03:154,15,0	1/1:7,0:7:21.01:192,21,0	1/1:9,0:9:21.02:196,21,0	1/1:5,0:5:12.03:130,12,0	1/1:10,1:11:15.03:150,15,0	1/1:6,3:9:24.06:286,24,0	1/1:4,1:5:12.03:132,12,0	1/1:10,0:10:21.05:215,21,0	1/1:9,0:9:27.05:267,27,0	1/1:7,0:7:18.03:183,18,0	1/1:4,1:5:15.04:171,15,0	1/1:3,0:3:9.01:84,9,0
chr10	91374813	.	G	GA	11660.16	PASS	AB=0.845;AC=52;AF=0.929;AN=56;BaseQRankSum=-2.414;DP=319;FS=0.000;HRun=1;HaplotypeScore=163.3962;InbreedingCoeff=0.1483;MQ=55.06;MQ0=0;MQRankSum=-3.374;QD=37.25;ReadPosRankSum=1.998;VQSLOD=4.4139;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:30.10:478,30,0	1/1:0,2:2:6.02:96,6,0	0/1:4,1:5:41.09:41,0,111	0/1:5,1:5:36.30:36,0,93	1/1:0,7:7:9.71:187,10,0	1/1:2,11:13:26.94:423,27,0	1/1:0,15:15:39.13:622,39,0	1/1:3,13:16:48.03:682,48,0	1/1:1,16:16:48.16:757,48,0	1/1:1,11:12:33.11:527,33,0	0/0:1,5:6:0.47:0,0,1	1/1:1,21:22:66.18:1023,66,0	1/1:2,14:16:45.12:681,45,0	1/1:0,15:15:42.14:669,42,0	1/1:2,14:16:33.10:526,33,0	1/1:3,16:19:51.17:806,51,0	1/1:0,8:8:18.06:287,18,0	1/1:0,8:8:24.08:383,24,0	1/1:1,12:13:36.08:545,36,0	1/1:1,7:8:12.04:191,12,0	1/1:1,13:15:15.05:239,15,0	1/1:0,10:11:24.07:382,24,0	1/1:1,8:9:12.04:191,12,0	1/1:0,10:10:21.07:335,21,0	1/1:0,9:9:27.09:430,27,0	1/1:4,9:13:39.09:563,39,0	1/1:0,8:8:24.08:375,24,0	1/1:1,3:4:12.04:184,12,0
chr10	91374822	.	T	TC	11440.91	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-3.777;DP=376;FS=4.470;HRun=3;HaplotypeScore=192.2730;InbreedingCoeff=0.8043;MQ=52.63;MQ0=0;MQRankSum=-2.967;QD=32.05;ReadPosRankSum=3.201;VQSLOD=3.8171;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,14:20:23.82:439,24,0	1/1:0,2:2:6.02:84,6,0	0/0:6,0:5:9.01:0,9,96	0/0:6,0:5:11.97:0,12,113	1/1:3,7:10:12.70:187,13,0	1/1:0,13:13:30.10:414,30,0	1/1:3,16:19:48.07:626,48,0	1/1:3,12:15:39.11:510,39,0	1/1:1,18:18:54.18:747,54,0	1/1:3,13:16:48.14:635,48,0	0/0:0,7:7:0.47:0,0,1	1/1:5,22:27:75.23:1010,75,0	1/1:1,15:16:45.15:622,45,0	1/1:3,19:22:60.11:773,60,0	1/1:1,15:16:42.14:580,42,0	1/1:2,20:22:66.18:900,66,0	1/1:2,7:9:15.05:210,15,0	1/1:1,9:10:27.09:376,27,0	1/1:6,9:15:33.07:431,33,0	1/1:1,10:11:12.03:168,12,0	1/1:3,14:17:21.07:284,21,0	1/1:0,11:11:24.07:335,24,0	1/1:2,9:11:18.06:249,18,0	1/1:1,9:10:14.05:245,14,0	1/1:4,9:13:33.02:412,33,0	1/1:3,14:17:45.13:598,45,0	1/1:2,8:10:30.07:398,30,0	1/1:1,5:6:15.05:210,15,0
chr10	91377609	.	GT	G	5378.79	PASS	AB=0.776;AC=48;AF=0.857;AN=56;BaseQRankSum=-1.674;DP=612;FS=4.688;HRun=14;HaplotypeScore=84.2993;InbreedingCoeff=0.0657;MQ=75.90;MQ0=0;MQRankSum=1.466;QD=8.79;ReadPosRankSum=3.265;VQSLOD=4.4442;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:7.07:10,0,7	1/1:9,0:9:8.82:27,9,0	0/1:15,1:15:1.21:1,0,34	0/1:16,1:13:1.09:1,0,21	1/1:4,19:24:55.16:351,55,0	0/1:9,17:26:7.04:240,0,7	0/1:6,20:26:26.96:272,0,27	1/1:10,25:37:32.64:402,33,0	0/1:3,9:14:2.93:110,0,3	1/1:3,13:17:40.48:265,40,0	1/1:6,16:22:15.88:253,16,0	1/1:7,22:29:56.02:379,56,0	1/1:6,15:22:38.57:265,39,0	1/1:2,16:19:37.73:253,38,0	1/1:34,0:34:12.67:39,13,0	1/1:7,14:23:36.74:238,37,0	0/1:30,0:30:8.37:20,0,8	1/1:8,8:16:17.72:126,18,0	1/1:3,10:15:36.78:236,37,0	1/1:7,16:23:38.21:251,38,0	1/1:4,16:21:31.78:211,32,0	1/1:5,12:17:20.67:144,21,0	0/1:9,12:21:91.50:126,0,92	1/1:4,17:22:2.20:223,2,0	1/1:5,15:20:53.28:359,53,0	1/1:11,15:25:24.68:273,25,0	1/1:14,12:26:35.42:241,35,0	1/1:1,3:4:8.92:62,9,0
chr10	91377610	.	T	TG	2289.40	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=1.337;DP=625;FS=0.000;HRun=2;HaplotypeScore=104.5369;InbreedingCoeff=0.9873;MQ=74.85;MQ0=0;MQRankSum=-4.286;QD=19.91;ReadPosRankSum=2.569;VQSLOD=3.6261;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,33:36:68.43:820,68,0	1/1:2,9:11:21.02:260,21,0	0/0:17,0:15:26.34:0,26,265	0/0:17,0:13:18.01:0,18,194	0/0:25,0:25:54.01:0,54,512	0/0:26,0:26:65.62:0,66,534	0/0:26,0:26:65.84:0,66,575	0/0:35,0:35:91.37:0,91,776	0/0:16,0:16:32.93:0,33,282	0/0:18,0:18:46.92:0,47,374	0/0:23,0:23:57.30:0,57,471	0/0:30,0:30:77.76:0,78,631	0/0:23,0:23:41.80:0,42,428	0/0:19,0:19:44.87:0,45,360	1/1:5,32:37:59.99:738,60,0	0/0:24,0:24:56.72:0,57,456	1/1:5,26:31:33.98:631,34,0	0/0:14,0:14:35.90:0,36,297	0/0:17,0:17:44.85:0,45,357	0/0:24,0:24:56.84:0,57,468	0/0:21,0:21:41.88:0,42,336	0/0:17,0:17:38.83:0,39,307	0/0:21,0:21:50.96:0,51,490	0/0:22,0:22:32.70:0,33,375	0/0:21,0:21:59.83:0,60,485	0/0:26,0:25:68.53:0,69,550	0/0:23,0:23:65.85:0,66,540	0/0:5,0:5:11.96:0,12,95
chr10	91377787	.	T	TAA	4444.99	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=2.250;DP=593;FS=9.055;HRun=12;HaplotypeScore=98.3519;InbreedingCoeff=0.9519;MQ=69.63;MQ0=0;MQRankSum=1.878;QD=18.91;ReadPosRankSum=-2.128;VQSLOD=3.0744;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:39:96.05:0,96,415	0/0:1,0:11:24.68:0,25,107	0/0:9,0:9:5.11:0,5,33	0/1:7,0:6:0:1,0,0	0/0:16,0:19:41.40:0,41,357	1/1:4,17:22:54.05:728,54,0	1/1:2,7:12:20.04:214,20,0	0/0:41,0:45:99:0,105,914	0/0:12,0:12:29.98:0,30,272	1/1:11,16:28:60.89:749,61,0	1/1:3,16:23:46.29:429,46,0	0/0:32,0:34:65.95:0,66,749	1/1:4,7:15:27.07:340,27,0	0/0:25,0:25:50.81:0,51,453	0/0:1,0:23:54.87:0,55,237	1/1:7,0:30:47.41:164,47,0	0/0:2,0:31:69.83:0,70,299	1/1:4,9:16:29.53:351,30,0	0/0:18,0:19:47.77:0,48,428	0/0:16,0:17:29.70:0,30,309	0/0:13,0:13:36:0,36,333	1/1:0,16:19:38.73:545,39,0	1/1:10,14:26:27.88:318,28,0	1/1:7,11:20:32.60:429,33,0	1/1:2,14:17:14.54:177,15,0	0/0:22,0:22:53.88:0,54,499	0/0:24,0:28:67.94:0,68,569	0/0:9,0:10:17.73:0,18,151
chr10	91378222	.	A	ACAG	22335.77	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-13.945;DP=788;FS=0.593;HRun=0;HaplotypeScore=131.2485;InbreedingCoeff=0.9904;MQ=91.72;MQ0=1;MQRankSum=-5.583;QD=48.87;ReadPosRankSum=3.554;VQSLOD=6.6218;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,38:44:99:2158,99,0	1/1:1,6:7:18.06:393,18,0	0/0:34,0:34:78.25:0,78,1185	0/0:33,0:33:86.81:0,87,1297	1/1:1,7:8:21.07:455,21,0	0/0:16,0:16:42.14:0,42,663	0/0:38,0:38:99:0,105,1596	1/1:6,28:35:84.24:1709,84,0	1/1:3,33:37:78.27:1702,78,0	0/0:20,0:19:48.16:0,48,741	0/0:8,0:8:21.04:0,21,306	1/1:3,46:51:99:2485,114,0	0/0:27,0:27:69.24:0,69,1093	1/1:2,32:34:93.32:2029,93,0	1/1:7,47:59:99:2589,123,0	0/0:52,0:51:99:0,132,2041	1/1:5,25:31:69.24:1507,69,0	0/0:18,0:18:45.12:0,45,687	1/1:7,18:25:54.18:1161,54,0	1/1:1,8:10:18.06:393,18,0	1/1:4,44:50:99:2422,114,0	0/0:12,0:12:33.11:0,33,520	0/0:15,0:14:33.11:0,33,523	0/0:48,0:48:99:0,117,1781	0/0:10,0:9:21.07:0,21,333	1/1:4,27:32:10.74:1569,11,0	1/1:5,16:21:45.15:978,45,0	1/1:1,12:13:36.12:787,36,0
chr10	91378259	.	T	TCC	14214.80	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-19.172;DP=757;FS=2.432;HRun=1;HaplotypeScore=129.5849;InbreedingCoeff=0.9982;MQ=84.53;MQ0=1;MQRankSum=0.342;QD=50.59;ReadPosRankSum=4.463;VQSLOD=4.9633;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,114,1724	0/0:11,0:11:30.10:0,30,459	0/0:23,0:23:62.95:0,63,907	0/0:30,0:30:81.24:0,81,1157	0/0:6,0:6:18.06:0,18,276	1/1:0,20:20:54.19:1043,54,0	1/1:2,41:43:99:2281,120,0	0/0:27,0:27:72.24:0,72,1082	0/0:28,0:28:72.24:0,72,1098	1/1:2,24:25:69.20:1276,69,0	1/1:2,9:11:30.10:567,30,0	0/0:43,0:43:99:0,105,1561	1/1:1,34:35:99:1931,102,0	0/0:35,0:35:99:0,102,1488	0/0:49,0:49:99:0,111,1675	1/1:2,43:44:99:2191,114,0	0/0:29,0:29:78.21:0,78,1146	1/1:0,21:20:54.19:1043,54,0	0/0:21,0:21:57.19:0,57,870	0/0:13,0:13:33.10:0,33,484	0/0:48,0:47:99:0,105,1569	1/1:1,11:12:27.09:521,27,0	1/1:1,14:14:39.13:753,39,0	1/1:1,40:41:99:2144,111,0	1/1:0,12:11:24.08:464,24,0	0/0:30,1:31:32.44:0,32,1235	0/0:25,0:25:69.22:0,69,1027	0/0:15,0:15:39.13:0,39,597
chr10	91378527	.	TC	T	1466.55	PASS	AB=1.000;AC=39;AF=0.813;AN=48;BaseQRankSum=-2.446;DP=213;FS=8.897;HRun=1;HaplotypeScore=47.9249;InbreedingCoeff=0.2999;MQ=56.25;MQ0=22;MQRankSum=-2.699;QD=9.17;ReadPosRankSum=-0.594;VQSLOD=0.0753;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,6:23:26.68:180,27,0	./.	0/0:18,1:5:4.91:0,5,51	0/0:12,0:5:9.02:0,9,34	./.	./.	1/1:11,0:6:11.46:76,11,0	1/1:8,0:4:5.95:42,6,0	1/1:4,0:5:11.88:82,12,0	1/1:5,0:4:2.97:20,3,0	1/1:4,1:5:2.96:19,3,0	1/1:6,0:6:8.93:66,9,0	./.	0/0:4,0:4:0:0,0,0	1/1:7,4:11:23.94:199,24,0	1/1:7,0:6:9.48:82,9,0	1/1:17,6:24:62.48:459,62,0	0/1:9,0:9:12.73:40,0,13	1/1:4,0:3:3:27,3,0	1/1:2,0:1:2.97:20,3,0	1/1:11,0:8:3:26,3,0	0/0:2,0:1:0:0,0,0	1/1:5,0:5:6:51,6,0	1/1:8,0:8:8.78:75,9,0	1/1:3,0:3:2.87:26,3,0	1/1:4,0:5:6:51,6,0	1/1:2,0:2:2.94:18,3,0	1/1:2,0:2:2.98:22,3,0
chr10	91378543	.	GGCGGGGGGGA	G	2468.88	PASS	AB=1.000;AC=25;AF=0.481;AN=52;BaseQRankSum=0.074;DP=204;FS=4.506;HRun=0;HaplotypeScore=61.2016;InbreedingCoeff=0.6260;MQ=60.59;MQ0=5;MQRankSum=-2.682;QD=21.47;ReadPosRankSum=1.294;VQSLOD=1.8497;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:17.86:350,18,0	./.	0/0:24,0:7:12.40:0,12,224	0/1:17,0:8:1.36:1,0,56	0/0:4,0:4:7.99:0,8,104	1/1:12,0:10:21.07:298,21,0	1/1:11,0:10:14.25:198,14,0	0/0:13,0:10:20.05:0,20,218	0/0:3,0:3:8.81:0,9,109	1/1:3,0:2:3.01:41,3,0	0/0:2,0:2:0.89:0,1,2	0/0:7,0:7:3.62:0,4,86	0/1:2,0:2:8.98:30,0,9	0/0:6,0:6:17.85:0,18,283	1/1:7,4:11:21.07:481,21,0	1/1:7,0:6:14.69:220,15,0	1/1:10,6:16:31.77:664,32,0	1/1:7,0:7:12.04:170,12,0	0/0:5,0:5:12.59:0,13,198	0/1:1,0:1:0:0,0,0	0/0:6,0:6:8.86:0,9,142	1/1:4,0:4:5.16:54,5,0	./.	1/1:7,0:7:8.30:87,8,0	1/1:3,0:2:3.01:51,3,0	0/0:5,0:5:9.40:0,9,140	0/0:6,0:6:3.01:0,3,64	0/0:2,0:2:3.48:0,3,53
chr10	91378544	.	GC	G	1449.96	PASS	AB=0.971;AC=48;AF=0.923;AN=52;BaseQRankSum=-0.918;DP=201;FS=9.894;HRun=1;HaplotypeScore=46.1001;InbreedingCoeff=0.2896;MQ=62.19;MQ0=4;MQRankSum=-0.503;QD=8.43;ReadPosRankSum=0.729;VQSLOD=-0.0189;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:14:11.68:69,12,0	./.	0/0:23,0:7:8.92:0,9,64	0/1:15,1:7:1.81:2,0,12	1/1:4,0:4:5.75:32,6,0	1/1:12,0:10:20.86:159,21,0	1/1:9,0:8:14.84:104,15,0	1/1:13,0:10:11.73:63,12,0	1/1:5,0:5:7.08:53,7,0	1/1:2,0:1:2.97:20,3,0	1/1:2,0:2:0.47:1,0,0	1/1:8,1:9:8.53:54,9,0	1/1:3,0:3:5.95:44,6,0	1/1:6,0:6:11.27:110,11,0	1/1:11,0:11:19.48:103,19,0	1/1:6,0:5:14.92:114,15,0	0/1:17,0:17:1.20:103,0,1	1/1:6,0:6:14.87:108,15,0	1/1:1,4:5:14.87:107,15,0	1/1:0,1:1:2.68:11,3,0	1/1:3,0:3:8.60:50,9,0	1/1:4,0:4:5.90:38,6,0	./.	1/1:7,0:7:4.56:31,5,0	1/1:3,0:2:2.84:26,3,0	1/1:1,3:4:11.89:85,12,0	1/1:7,0:7:2.98:22,3,0	1/1:3,0:3:5.98:46,6,0
chr10	91378545	.	C	CG	671.90	PASS	AB=0.871;AC=36;AF=0.692;AN=52;BaseQRankSum=-3.557;DP=202;FS=0.000;HRun=16;HaplotypeScore=50.9644;InbreedingCoeff=0.2912;MQ=64.78;MQ0=4;MQRankSum=1.163;QD=4.83;ReadPosRankSum=-1.364;VQSLOD=0.9917;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:2.20:0,2,14	./.	0/0:24,0:8:8.85:0,9,86	0/1:15,0:7:8.16:8,0,17	1/1:1,3:4:5.80:43,6,0	1/1:11,0:9:2.31:19,2,0	0/1:9,0:8:0:0,0,0	1/1:5,9:12:12.01:116,12,0	1/1:4,1:5:7.82:64,8,0	1/1:2,0:1:0.47:1,0,0	1/1:1,0:1:0.47:1,0,0	1/1:1,8:9:8.22:42,8,0	0/0:4,0:4:0.90:0,1,2	1/1:6,0:6:6.44:29,6,0	0/1:7,4:11:5.21:27,0,5	0/0:6,0:5:0.31:0,0,1	0/1:10,5:15:38.11:64,0,38	0/0:5,0:5:0.90:0,1,2	1/1:5,1:6:12.24:80,12,0	1/1:2,0:2:3.01:36,3,0	1/1:3,0:3:9.03:106,9,0	0/0:4,0:4:0.27:0,0,0	./.	1/1:7,0:7:0.46:1,0,0	1/1:2,0:1:0.47:1,0,0	1/1:4,1:5:11.60:75,12,0	1/1:1,6:7:3.01:34,3,0	1/1:3,0:3:5.94:43,6,0
chr10	91378552	.	GA	G	1132.38	PASS	AC=26;AF=0.500;AN=52;BaseQRankSum=3.802;DP=253;FS=13.339;HRun=2;HaplotypeScore=57.3632;InbreedingCoeff=0.8370;MQ=61.85;MQ0=3;MQRankSum=-4.454;QD=10.20;ReadPosRankSum=1.950;VQSLOD=0.1152;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:17.56:104,18,0	./.	0/0:28,0:11:20.89:0,21,221	0/0:21,0:10:11.23:0,11,134	0/0:5,0:5:11.97:0,12,106	1/1:14,0:12:29.57:197,30,0	1/1:9,0:9:17.75:117,18,0	0/0:20,0:17:45.23:0,45,386	0/0:5,0:5:14.19:0,14,119	1/1:3,0:2:5.94:41,6,0	1/1:3,0:3:3:27,3,0	0/0:12,0:12:17.57:0,18,127	1/1:7,0:7:7.17:79,7,0	0/0:8,0:8:14.60:0,15,116	1/1:12,0:12:23.89:142,24,0	1/1:9,0:9:26.83:203,27,0	1/1:16,0:16:19.54:165,20,0	1/1:4,0:4:11.88:83,12,0	0/0:7,0:6:17.85:0,18,138	0/0:5,0:5:14.88:0,15,109	0/0:7,0:7:17.84:0,18,130	1/1:4,0:4:2.17:17,2,0	./.	1/1:8,0:8:14.86:108,15,0	1/1:3,0:2:6:52,6,0	0/0:6,0:6:17.68:0,18,144	0/0:6,0:6:2.99:0,3,23	0/0:4,0:4:11.81:0,12,106
chr10	91378997	.	T	TC	8591.81	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-10.490;DP=628;FS=1.407;HRun=2;HaplotypeScore=68.2689;InbreedingCoeff=0.9995;MQ=81.63;MQ0=1;MQRankSum=-1.265;QD=37.36;ReadPosRankSum=0.951;VQSLOD=5.4754;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.25:0,93,1123	0/0:12,0:12:27.07:0,27,321	0/0:23,0:23:62.78:0,63,686	0/0:18,0:18:42.05:0,42,475	0/0:24,0:24:66.21:0,66,813	1/1:2,22:24:60.20:864,60,0	1/1:0,22:21:54.18:777,54,0	0/0:25,0:25:69.20:0,69,835	0/0:25,0:25:75.24:0,75,928	1/1:4,23:27:66.21:932,66,0	1/1:0,14:14:36.12:518,36,0	0/0:27,0:27:72.23:0,72,892	1/1:2,23:25:72.24:1030,72,0	0/0:31,0:31:93.25:0,93,1127	0/0:31,0:31:90.26:0,90,1090	1/1:1,31:32:90.30:1296,90,0	0/0:27,0:27:72.22:0,72,891	1/1:2,15:17:45.15:648,45,0	0/0:16,0:16:45.14:0,45,558	0/0:16,0:16:42.10:0,42,505	0/0:31,0:31:90.27:0,90,1101	1/1:1,19:20:51.17:724,51,0	1/1:1,11:12:36.12:517,36,0	1/1:5,15:20:42.14:596,42,0	1/1:1,16:17:48.16:689,48,0	0/0:22,1:23:26:0,26,775	0/0:27,0:27:81.25:0,81,1003	0/0:9,0:9:27.08:0,27,335
chr10	91379053	.	C	CT	2395.18	PASS	AB=0.816;AC=20;AF=0.357;AN=56;BaseQRankSum=-3.902;DP=621;FS=9.547;HRun=14;HaplotypeScore=96.3459;InbreedingCoeff=0.3843;MQ=65.29;MQ0=8;MQRankSum=-0.616;QD=7.90;ReadPosRankSum=-1.612;VQSLOD=1.7239;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:39:53.76:0,54,238	0/0:6,0:10:8.99:0,9,37	0/0:20,0:14:12.71:0,13,59	0/0:6,0:6:3.83:0,4,11	0/0:19,1:20:35.40:0,35,229	1/1:14,12:26:37.97:345,38,0	0/1:15,8:25:4.56:229,0,5	0/0:21,0:21:28.65:0,29,175	0/1:22,2:25:6.66:7,0,201	0/1:13,5:18:11.50:154,0,11	1/1:14,4:18:2.89:130,3,0	0/1:17,3:21:34.23:34,0,110	1/1:18,6:25:7.61:258,8,0	0/0:20,0:19:23.40:0,23,153	0/0:10,0:31:40.67:0,41,117	1/1:16,9:27:25.24:263,25,0	0/0:9,0:38:58.63:0,59,212	1/1:18,7:26:9.19:299,9,0	0/0:22,1:24:2.04:0,2,133	0/1:14,1:17:6.69:7,0,131	0/0:19,1:20:10.66:0,11,190	0/1:13,3:17:1.50:93,0,1	0/1:8,4:11:4.27:91,0,4	1/1:11,12:26:52.15:492,52,0	0/1:12,5:15:8.58:173,0,9	0/0:21,0:22:22.88:0,23,138	0/0:28,0:28:13.48:0,13,175	0/0:10,0:10:11.82:0,12,53
chr10	91379284	.	C	CTG	29283.19	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.698;DP=722;FS=9.561;HRun=0;HaplotypeScore=87.5946;InbreedingCoeff=0.9981;MQ=80.05;MQ0=1;MQRankSum=-8.762;QD=42.56;ReadPosRankSum=5.901;VQSLOD=6.4800;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:34:84.29:1463,84,0	1/1:2,9:11:24.08:421,24,0	0/0:17,0:17:25.80:0,26,527	0/0:17,0:17:39.13:0,39,520	1/1:3,20:23:54.18:946,54,0	1/1:5,20:25:54.18:940,54,0	1/1:3,25:28:57.20:1000,57,0	1/1:4,27:31:81.26:1348,81,0	1/1:2,16:18:42.14:736,42,0	1/1:2,19:21:57.20:988,57,0	1/1:3,25:28:72.25:1258,72,0	1/1:3,24:28:72.25:1245,72,0	1/1:0,21:21:48.16:841,48,0	1/1:1,32:33:93.32:1630,93,0	1/1:4,45:50:99:2209,126,0	1/1:2,27:30:69.24:1210,69,0	1/1:2,25:26:66.23:1157,66,0	1/1:1,14:15:42.14:736,42,0	1/1:2,21:23:63.19:1074,63,0	1/1:4,23:27:60.21:1051,60,0	1/1:2,34:36:84.29:1473,84,0	1/1:1,27:29:75.26:1315,75,0	1/1:0,15:16:42.14:736,42,0	1/1:3,38:42:99:1841,105,0	1/1:2,17:19:48.16:841,48,0	1/1:4,24:28:72.25:1247,72,0	1/1:5,21:26:51.06:894,51,0	1/1:3,16:19:39.13:684,39,0
chr10	91379615	.	CTTT	C	4854.19	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-2.221;DP=652;FS=2.174;HRun=15;HaplotypeScore=108.2929;InbreedingCoeff=0.9285;MQ=68.25;MQ0=6;MQRankSum=-2.224;QD=17.85;ReadPosRankSum=4.560;VQSLOD=4.1256;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:33:75.23:0,75,1264	0/0:7,0:11:24.04:0,24,352	0/1:46,0:17:6.72:7,0,148	0/0:24,0:13:14.90:0,15,102	0/0:10,0:29:62.79:0,63,515	1/1:5,14:20:35.97:404,36,0	1/1:7,15:22:41.98:471,42,0	0/0:19,0:41:74.80:0,75,668	0/0:8,0:23:38.70:0,39,294	1/1:1,11:12:33.04:357,33,0	1/1:5,15:22:44.82:472,45,0	0/0:6,0:18:32.88:0,33,269	1/1:7,8:14:20.97:233,21,0	0/0:6,0:16:29.80:0,30,255	0/0:28,0:29:72.18:0,72,1178	1/1:8,29:38:71.75:791,72,0	0/0:30,0:31:81.22:0,81,1340	1/1:5,11:16:23.96:269,24,0	0/0:11,0:23:38.70:0,39,300	0/0:3,0:21:56.87:0,57,531	0/0:1,0:8:10.21:0,10,71	1/1:3,14:18:34.33:385,34,0	1/1:0,16:16:45.08:490,45,0	1/1:5,17:22:35.12:400,35,0	1/1:2,21:25:54.01:574,54,0	0/0:5,0:23:58.06:0,58,446	0/0:5,0:28:53.32:0,53,413	0/0:6,0:16:22.17:0,22,163
chr10	91380545	.	A	AT	2730.42	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=11.047;DP=594;FS=17.905;HRun=6;HaplotypeScore=116.5774;InbreedingCoeff=0.8896;MQ=73.42;MQ0=8;MQRankSum=-5.314;QD=11.52;ReadPosRankSum=2.532;VQSLOD=1.2984;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:43.99:0,44,438	0/0:7,0:7:14.97:0,15,140	0/0:28,0:17:2.57:0,3,158	0/1:19,0:13:8.76:9,0,64	0/0:26,0:25:45.07:0,45,444	1/1:21,1:22:30.04:300,30,0	1/1:26,2:26:29.93:259,30,0	0/0:40,0:38:80.91:0,81,783	0/0:12,0:12:11.98:0,12,121	1/1:20,0:20:47.84:521,48,0	1/1:9,0:9:12.95:119,13,0	0/0:39,0:38:71.66:0,72,680	1/1:21,3:23:34.09:287,34,0	0/0:19,0:19:30.01:0,30,293	0/0:27,0:27:26.97:0,27,272	1/1:20,3:23:29.97:272,30,0	0/0:27,0:27:69.07:0,69,675	1/1:18,2:19:33.04:326,33,0	0/0:26,0:26:45.44:0,45,438	0/0:12,0:11:17.94:0,18,183	0/0:16,0:16:23.92:0,24,217	1/1:15,0:15:29.19:261,29,0	1/1:19,0:19:16.61:177,17,0	1/1:25,1:26:21.02:206,21,0	1/1:12,0:12:21.03:216,21,0	0/0:25,0:25:35.94:0,36,356	0/0:19,0:19:41.90:0,42,387	0/0:8,0:8:12:0,12,113
chr10	91380547	.	TTTTTC	T	3695.44	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=10.384;DP=607;FS=9.536;HRun=0;HaplotypeScore=139.6360;InbreedingCoeff=0.8059;MQ=68.89;MQ0=10;MQRankSum=-2.310;QD=15.86;ReadPosRankSum=5.534;VQSLOD=2.2964;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:53.42:0,53,435	0/0:8,0:8:18.76:0,19,149	0/0:26,0:15:6.67:0,7,121	0/1:17,0:11:3.32:3,0,54	0/0:28,0:26:51.10:0,51,606	1/1:22,0:22:33.03:442,33,0	1/1:27,2:27:26.86:391,27,0	0/0:38,0:36:88.74:0,89,1072	0/0:11,0:11:26.62:0,27,304	1/1:20,0:20:32.35:464,32,0	1/1:9,0:9:15.90:119,16,0	0/0:38,0:37:93.12:0,93,1145	1/1:25,0:24:34.62:379,35,0	0/0:21,0:21:50.87:0,51,583	0/0:26,0:26:42.27:0,42,344	1/1:22,1:23:30.08:398,30,0	0/0:32,0:32:80.71:0,81,845	1/1:19,0:18:31.92:449,32,0	0/0:26,0:25:62.71:0,63,697	0/0:16,0:15:27.87:0,28,380	0/0:13,0:13:26.51:0,27,271	1/1:12,1:13:29.84:323,30,0	0/1:17,0:17:12.31:201,0,12	0/1:27,0:27:3.01:269,0,3	1/1:12,0:12:20.98:257,21,0	0/0:26,0:26:43.91:0,44,703	0/0:21,0:21:53.81:0,54,673	0/0:10,0:9:14.89:0,15,137
chr10	91380548	.	TTTTC	T	4734	PASS	AB=0.779;AC=22;AF=0.393;AN=56;BaseQRankSum=6.995;DP=605;FS=14.785;HRun=0;HaplotypeScore=126.6942;InbreedingCoeff=0.7757;MQ=68.60;MQ0=10;MQRankSum=-3.568;QD=18.64;ReadPosRankSum=4.787;VQSLOD=3.4636;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:45.30:0,45,291	0/0:8,0:8:17.33:0,17,101	0/1:26,0:15:1.61:2,0,99	0/1:17,0:11:3.32:3,0,54	0/0:28,0:26:52.65:0,53,511	1/1:2,18:20:33.03:545,33,0	1/1:7,21:26:27.79:480,28,0	0/0:40,0:38:73.23:0,73,885	0/0:12,0:12:26.19:0,26,244	1/1:2,18:20:33.95:597,34,0	1/1:0,9:9:17.76:176,18,0	0/0:37,0:36:85.82:0,86,887	1/1:6,19:24:36.07:563,36,0	0/0:21,0:21:52.07:0,52,431	0/0:25,0:25:23.77:0,24,212	1/1:6,15:21:30.10:506,30,0	0/0:34,0:34:57.01:0,57,569	1/1:6,13:18:33.08:529,33,0	0/0:26,0:25:62.33:0,62,569	0/0:17,0:15:24.66:0,25,282	0/0:13,0:13:11.46:0,11,191	1/1:3,10:13:29.86:393,30,0	0/1:5,12:17:11.33:266,0,11	0/1:3,24:27:2.23:348,0,2	1/1:2,10:12:20.99:327,21,0	0/0:27,0:27:39.43:0,39,512	0/0:20,0:20:50.46:0,50,534	0/0:10,0:9:14.92:0,15,123
chr10	91380549	.	TTTC	T	3615.97	PASS	AB=0.988;AC=23;AF=0.411;AN=56;BaseQRankSum=8.664;DP=601;FS=35.730;HRun=0;HaplotypeScore=120.0603;InbreedingCoeff=0.6669;MQ=67.03;MQ0=10;MQRankSum=-5.426;QD=13.15;ReadPosRankSum=1.707;VQSLOD=1.4040;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:8.21:0,8,155	0/0:8,0:8:9.43:0,9,52	0/1:26,0:15:1.89:2,0,94	0/1:14,0:9:3.27:3,0,54	0/0:27,0:25:42.48:0,42,390	1/1:20,0:20:33.04:408,33,0	1/1:26,2:26:28.43:385,28,0	0/0:39,0:37:59.41:0,59,670	0/0:12,0:12:9.43:0,9,146	1/1:20,0:20:35.03:438,35,0	1/1:9,0:9:17.76:148,18,0	0/0:37,0:36:49.93:0,50,616	1/1:24,1:24:36.06:440,36,0	0/0:22,0:22:32.26:0,32,263	0/1:25,0:25:3.47:3,0,90	1/1:21,0:21:30.08:376,30,0	0/0:34,0:34:0.48:0,0,289	1/1:18,0:17:33.07:406,33,0	0/0:26,0:25:38.16:0,38,403	0/0:18,0:16:24.40:0,24,215	0/0:13,0:13:9.26:0,9,130	1/1:13,0:13:29.84:304,30,0	0/1:14,1:16:11.06:205,0,11	0/1:27,0:27:0.62:252,0,1	1/1:12,0:12:20.98:245,21,0	0/0:28,0:28:8.58:0,9,326	0/0:20,0:20:26.35:0,26,360	0/0:10,0:9:14.53:0,15,94
chr10	91380550	.	TTC	T	3223.52	PASS	AB=0.977;AC=33;AF=0.589;AN=56;BaseQRankSum=7.552;DP=591;FS=92.251;HRun=0;HaplotypeScore=111.9569;InbreedingCoeff=0.0692;MQ=65.46;MQ0=10;MQRankSum=-6.005;QD=6.83;ReadPosRankSum=2.366;VQSLOD=-0.7338;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,2:32:42.96:43,0,83	0/1:8,0:8:10.89:11,0,34	0/1:25,0:14:1.88:2,0,99	0/1:14,0:8:3.25:3,0,55	0/0:27,0:25:30.95:0,31,281	1/1:19,0:19:33.01:342,33,0	1/1:27,0:25:28.82:314,29,0	0/0:38,0:36:25.90:0,26,493	0/1:12,0:12:10.32:10,0,74	1/1:20,0:20:35.72:367,36,0	1/1:9,0:9:17.75:135,18,0	0/1:35,2:36:17.34:17,0,336	1/1:24,0:23:36.03:362,36,0	0/1:21,1:22:46.27:46,0,134	0/1:24,2:26:30.78:67,0,31	1/1:21,0:21:30:310,30,0	0/1:33,1:34:99:135,0,159	1/1:19,0:17:35.79:353,36,0	0/0:26,0:25:1.85:0,2,265	0/0:18,0:16:7.86:0,8,125	0/1:13,0:13:11.03:11,0,73	1/1:13,0:13:29.77:257,30,0	0/1:15,0:15:10.30:159,0,10	1/1:26,0:26:7.85:214,8,0	1/1:11,0:11:20.97:205,21,0	0/1:25,0:25:27.64:28,0,213	0/1:19,1:20:11.93:12,0,220	0/0:10,0:9:9.68:0,10,59
chr10	91380551	.	TC	T	2849.57	PASS	AB=0.940;AC=34;AF=0.607;AN=56;BaseQRankSum=6.716;DP=589;FS=118.446;HRun=1;HaplotypeScore=108.8742;InbreedingCoeff=-0.0131;MQ=62.82;MQ0=11;MQRankSum=-6.951;QD=5.92;ReadPosRankSum=-0.043;VQSLOD=0.2733;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:6.86:0,7,168	0/0:8,0:8:6.90:0,7,59	0/1:24,0:13:2.07:2,0,87	0/1:12,0:6:3.18:3,0,55	0/0:26,2:25:17.76:0,18,229	1/1:19,0:19:32.93:276,33,0	1/1:27,0:25:29.33:249,29,0	0/0:38,1:37:4.70:0,5,398	0/1:12,0:12:37.19:37,0,41	1/1:20,0:20:35.67:298,36,0	1/1:9,0:9:17.73:122,18,0	0/1:34,4:37:97.07:97,0,211	1/1:23,0:22:35.88:290,36,0	0/1:21,0:21:78.17:78,0,88	0/1:26,0:26:38.54:39,0,81	1/1:19,0:19:29.22:240,29,0	0/1:34,0:34:89.76:90,0,252	1/1:18,1:17:35.66:287,36,0	0/1:23,3:25:55.32:55,0,237	0/1:18,1:17:12.19:12,0,70	0/1:11,2:13:50.49:50,0,60	1/1:11,0:12:29.39:211,29,0	0/1:15,0:15:4.40:120,0,4	1/1:26,0:26:10.47:170,10,0	1/1:11,0:11:20.89:166,21,0	0/1:25,1:26:50.61:51,0,165	0/1:17,3:20:69.91:70,0,139	0/1:6,4:9:8.27:8,0,38
chr10	91380552	.	CTT	C	1646.92	PASS	AB=0.887;AC=34;AF=0.607;AN=56;BaseQRankSum=3.505;DP=596;FS=4.623;HRun=17;HaplotypeScore=120.9056;InbreedingCoeff=0.2830;MQ=62.40;MQ0=13;MQRankSum=0.132;QD=3.70;ReadPosRankSum=8.087;VQSLOD=-0.4639;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,19:33:6.56:204,7,0	1/1:3,5:8:10.34:92,10,0	0/0:24,0:13:3.45:0,3,22	0/0:12,0:6:0:0,0,0	0/1:20,3:25:35.81:36,0,113	1/1:19,0:19:28.24:111,28,0	1/1:27,0:25:25.70:103,26,0	0/1:22,1:36:24.22:24,0,139	0/1:10,1:11:21.94:22,0,71	1/1:20,0:20:4.62:52,5,0	1/1:9,0:9:5.21:21,5,0	0/0:30,0:36:27.12:0,27,238	1/1:23,0:22:28.12:111,28,0	0/1:18,1:21:41.36:41,0,48	1/1:9,17:27:9.22:213,9,0	1/1:20,0:20:13.31:81,13,0	1/1:26,8:34:45.36:383,45,0	1/1:19,0:17:25.99:101,26,0	0/1:21,1:25:32.36:32,0,143	0/0:16,0:17:21.67:0,22,139	0/1:12,0:12:2.73:3,0,27	1/1:11,0:12:17.57:68,18,0	0/1:15,0:15:8.76:38,0,9	1/1:26,0:26:3.10:55,3,0	0/1:16,0:16:10.54:35,0,11	0/0:24,0:28:32.58:0,33,187	0/0:18,0:20:12.89:0,13,161	0/0:8,0:9:7.24:0,7,26
chr10	91380611	.	TTGCGCTTGCTAGGCAAGCGCTCTACCAC	T	18048.82	PASS	AB=0.640;AC=21;AF=0.420;AN=50;BaseQRankSum=9.654;DP=390;FS=45.945;HRun=0;HaplotypeScore=279.5749;InbreedingCoeff=0.8130;MQ=38.88;MQ0=15;MQRankSum=-8.791;QD=117.97;ReadPosRankSum=3.048;VQSLOD=2.8414;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:14.72:0,15,1727	0/0:5,0:5:9.03:0,9,1128	./.	./.	1/1:4,16:18:36.08:2333,36,0	0/0:15,0:15:15.05:0,15,1430	0/0:25,0:22:44.89:0,45,4751	1/1:19,0:19:47.63:338,48,0	1/1:0,7:6:18.06:1354,18,0	0/0:11,0:9:18.06:0,18,1442	0/0:2,0:2:3.01:0,3,385	1/1:4,13:16:39.13:2934,39,0	0/0:20,0:20:48.16:0,48,5253	1/1:2,11:13:21.07:1579,21,0	0/0:27,0:27:38.91:0,39,4613	0/0:24,0:24:54.19:0,54,6485	0/0:34,0:33:66.16:0,66,6774	0/0:27,0:26:53.86:0,54,6385	1/1:6,15:18:47.86:1586,48,0	1/1:3,16:18:42.14:2994,42,0	1/1:0,5:5:3.01:226,3,0	./.	0/0:6,0:6:12.04:0,12,834	0/0:16,0:14:32.46:0,32,3747	0/0:10,0:10:27.06:0,27,1832	0/1:7,9:14:99:1995,0,802	1/1:1,12:12:33.11:2483,33,0	1/1:2,1:2:3.01:226,3,0
chr10	91381213	.	CTT	C	8572.89	PASS	AB=0.681;AC=45;AF=0.804;AN=56;BaseQRankSum=0.024;DP=759;FS=0.404;HRun=15;HaplotypeScore=121.0023;InbreedingCoeff=0.5394;MQ=61.97;MQ0=14;MQRankSum=-1.570;QD=12.68;ReadPosRankSum=4.474;VQSLOD=3.7555;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,1:53:61.20:0,61,391	0/0:4,0:10:17.94:0,18,72	0/0:19,0:9:17.98:0,18,168	0/1:15,0:10:40.13:40,0,54	1/1:11,20:34:30.51:361,31,0	1/1:4,15:21:32.53:320,33,0	1/1:11,19:31:42.87:437,43,0	1/1:28,13:44:23.77:307,24,0	1/1:7,21:29:61.49:519,61,0	1/1:10,10:21:32.51:268,33,0	1/1:9,12:21:14.54:220,15,0	1/1:9,17:29:53.02:431,53,0	1/1:5,15:23:40.31:346,40,0	1/1:3,20:24:49.41:432,49,0	0/1:11,1:27:2.51:3,0,68	1/1:10,22:37:66.49:577,66,0	0/1:14,3:43:15.39:15,0,237	1/1:3,14:18:32.78:335,33,0	0/1:10,11:21:1.73:251,0,2	1/1:5,24:30:47.19:452,47,0	1/1:9,15:29:53.88:412,54,0	1/1:5,12:21:29.13:322,29,0	1/1:1,17:21:50.09:449,50,0	1/1:3,25:29:71.66:619,72,0	0/1:7,16:22:3.51:298,0,4	1/1:12,15:28:20.21:313,20,0	1/1:8,25:34:68.49:593,68,0	1/1:2,10:13:29.73:250,30,0
chr10	91382116	.	G	GGTCAGGAAGTACTGGGATTACA	154188.14	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.013;DP=837;FS=14.377;HRun=0;HaplotypeScore=396.6084;InbreedingCoeff=0.9990;MQ=65.98;MQ0=0;MQRankSum=-10.798;QD=194.93;ReadPosRankSum=5.730;VQSLOD=3.8488;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:39,9:54:99:9938,126,0	1/1:12,2:17:45.15:3549,45,0	0/0:30,0:30:84.29:0,84,3683	0/0:16,0:16:42.14:0,42,1397	1/1:18,5:26:44.91:2757,45,0	1/1:21,10:33:90.31:7722,90,0	1/1:25,6:38:90.31:6698,90,0	1/1:34,0:34:90.29:4978,90,0	1/1:16,7:24:69.24:4929,69,0	1/1:24,8:37:99:7366,105,0	1/1:14,9:23:61.48:4070,61,0	1/1:29,13:46:99:10051,123,0	1/1:26,7:35:90.31:7015,90,0	1/1:27,10:40:99:8794,105,0	1/1:25,16:47:99:10012,123,0	1/1:31,16:55:99:12065,138,0	1/1:10,4:16:30.10:2791,30,0	1/1:13,1:15:33.11:2869,33,0	1/1:8,6:16:42.13:3140,42,0	1/1:26,9:38:99:7588,102,0	1/1:17,1:21:39.13:1994,39,0	1/1:24,8:34:90.31:6523,90,0	1/1:18,6:25:66.16:4711,66,0	1/1:17,10:31:63.21:4946,63,0	1/1:15,4:22:54.66:4145,55,0	1/1:16,10:27:81.28:7012,81,0	1/1:17,8:27:66.23:5914,66,0	1/1:5,4:9:27.09:2610,27,0
chr10	91382550	.	G	GA	1195.03	PASS	AB=0.953;AC=43;AF=0.768;AN=56;BaseQRankSum=-3.182;DP=476;FS=13.661;HRun=8;HaplotypeScore=105.2850;InbreedingCoeff=0.0780;MQ=47.53;MQ0=3;MQRankSum=-2.739;QD=2.75;ReadPosRankSum=-0.002;VQSLOD=-0.3202;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,1:29:35.60:69,0,36	1/1:7,2:9:3.51:40,4,0	1/1:9,0:5:5.12:20,5,0	0/1:5,0:1:0:0,0,0	1/1:19,0:18:5.40:17,5,0	1/1:17,2:19:5.37:104,5,0	0/1:14,1:15:10.94:11,0,18	1/1:26,0:23:0.63:9,1,0	1/1:14,0:13:10.28:62,10,0	1/1:13,1:14:2.45:27,2,0	0/1:19,3:21:0.45:59,0,0	0/1:18,0:16:2.66:3,0,6	1/1:13,0:13:1.06:86,1,0	1/1:17,0:15:4.71:35,5,0	0/1:25,0:24:25:25,0,49	0/1:28,2:30:11.55:129,0,12	0/0:23,0:23:18.78:0,19,95	1/1:11,1:12:12.85:75,13,0	0/0:19,0:16:5.19:0,5,17	0/1:15,0:14:0.09:5,0,0	1/1:6,0:5:2.15:44,2,0	1/1:11,2:13:24.41:167,24,0	1/1:17,0:17:19.26:122,19,0	1/1:6,2:8:7.31:53,7,0	1/1:15,1:14:15.78:79,16,0	0/1:18,0:18:4.27:46,0,4	1/1:25,0:24:1.45:12,1,0	1/1:19,0:18:5.02:32,5,0
chr10	91382795	.	C	CCACA	5978.92	PASS	AB=0.802;AC=50;AF=0.926;AN=54;BaseQRankSum=0.081;DP=589;FS=5.904;HRun=0;HaplotypeScore=112.8668;InbreedingCoeff=-0.0066;MQ=60.27;MQ0=20;MQRankSum=0.228;QD=10.71;ReadPosRankSum=-0.618;VQSLOD=3.9110;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:51:9.32:149,0,9	1/1:7,1:8:6.02:141,6,0	0/1:28,0:16:0:0,0,0	./.	1/1:9,0:14:2.84:52,3,0	1/1:21,0:21:9:103,9,0	1/1:13,5:18:6.02:142,6,0	1/1:16,0:15:9:86,9,0	1/1:7,0:12:9.50:175,10,0	1/1:15,0:15:14.05:136,14,0	0/1:5,2:10:40.79:65,0,41	1/1:14,1:27:21.07:384,21,0	0/1:12,6:20:33.67:133,0,34	1/1:14,1:20:12.04:227,12,0	1/1:20,13:35:24.44:567,24,0	1/1:10,9:24:26.83:577,27,0	1/1:11,14:28:18.02:374,18,0	1/1:9,9:20:17.85:367,18,0	1/1:9,0:11:9.03:141,9,0	1/1:18,0:20:20.91:219,21,0	1/1:18,0:21:20.66:238,21,0	1/1:7,5:13:3.01:71,3,0	1/1:7,6:14:11.78:283,12,0	1/1:17,9:30:14.79:295,15,0	1/1:8,1:17:8.50:95,8,0	1/1:14,0:18:17.88:205,18,0	1/1:23,2:27:39.09:685,39,0	1/1:3,0:5:6.02:70,6,0
chr10	91382902	.	GAC	G	8883.87	PASS	AB=0.520;AC=21;AF=0.375;AN=56;BaseQRankSum=13.641;DP=670;FS=4.010;HRun=0;HaplotypeScore=86.8431;InbreedingCoeff=0.9234;MQ=88.46;MQ0=3;MQRankSum=-4.162;QD=36.11;ReadPosRankSum=1.456;VQSLOD=7.2614;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:96.31:0,96,1708	0/0:8,0:8:24.08:0,24,439	0/0:29,0:29:78.27:0,78,1402	0/0:26,0:26:60.88:0,61,1062	1/1:0,32:32:81.27:1159,81,0	0/0:25,0:25:69.24:0,69,1264	0/0:25,0:25:75.24:0,75,1306	1/1:1,22:20:57.12:757,57,0	1/1:1,12:13:36.12:515,36,0	0/0:31,0:31:90.31:0,90,1648	0/0:21,0:21:63.20:0,63,1115	1/1:0,25:25:66.22:945,66,0	0/0:17,0:17:51.16:0,51,902	1/1:0,13:13:36.12:515,36,0	0/0:29,0:29:87.30:0,87,1588	0/0:37,0:37:99:0,111,1972	0/0:36,0:36:99:0,105,1850	0/0:17,0:17:51.13:0,51,890	1/1:3,20:23:60.17:808,60,0	1/1:0,23:23:63.21:890,63,0	1/1:2,31:33:81.27:1153,81,0	0/0:26,0:26:78.25:0,78,1385	0/0:21,0:21:60.15:0,60,1056	0/0:28,0:28:84.27:0,84,1480	0/0:11,0:11:30.10:0,30,549	0/1:2,24:25:37.78:853,0,38	1/1:0,20:18:51.17:730,51,0	1/1:0,15:15:39.13:558,39,0
chr10	91383677	.	G	GAAAAAAAAAAAAAA	15105.50	PASS	AB=0.957;AC=40;AF=0.714;AN=56;BaseQRankSum=-6.780;DP=512;FS=6.775;HRun=12;HaplotypeScore=218.1492;InbreedingCoeff=0.1679;MQ=49.00;MQ0=10;MQRankSum=0.058;QD=34.81;ReadPosRankSum=-3.948;VQSLOD=0.0720;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:29:51.03:2021,51,0	1/1:3,4:8:5.97:216,6,0	0/0:30,0:13:25.49:0,25,419	0/0:18,0:6:8.55:0,9,84	1/1:19,0:18:1.42:74,1,0	1/1:22,0:18:41.97:1320,42,0	1/1:13,0:12:15.05:688,15,0	0/1:25,0:26:89.63:90,0,371	0/1:18,0:18:54.50:55,0,217	1/1:25,0:24:33.09:1072,33,0	1/1:22,0:21:45.04:1479,45,0	0/1:26,0:27:99:117,0,695	1/1:12,0:12:24.04:1019,24,0	0/0:22,0:21:20.44:0,20,502	1/1:19,0:18:30.02:1130,30,0	1/1:27,0:23:26.99:659,27,0	1/1:23,0:20:39.61:1583,40,0	1/1:13,0:10:6.02:377,6,0	0/1:14,0:17:88.99:89,0,225	0/1:20,0:19:85.02:85,0,85	0/1:12,0:12:36.98:37,0,71	1/1:6,0:6:6.02:210,6,0	1/1:17,0:16:33.03:1283,33,0	1/1:10,0:8:5.52:183,6,0	1/1:13,0:13:27.08:1117,27,0	0/1:20,0:21:92.46:92,0,188	0/1:9,0:10:99:110,0,153	0/0:8,0:7:2.45:0,2,16
chr10	91383685	.	AAAAAG	A	1706.90	PASS	AB=0.964;AC=18;AF=0.321;AN=56;BaseQRankSum=8.544;DP=490;FS=2.134;HRun=0;HaplotypeScore=124.6341;InbreedingCoeff=0.6068;MQ=52.28;MQ0=6;MQRankSum=0.559;QD=8.13;ReadPosRankSum=-2.167;VQSLOD=2.5661;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:28:60.53:0,61,1145	0/0:2,0:2:5.97:0,6,98	0/0:32,0:17:38.78:0,39,627	0/0:21,0:8:13.55:0,14,233	0/1:18,1:19:28.35:116,0,28	0/0:26,0:22:53.96:0,54,1085	0/0:12,0:11:26.65:0,27,550	1/1:31,0:30:40.73:297,41,0	0/1:17,0:17:30.98:56,0,31	0/0:15,0:14:33.29:0,33,611	0/0:20,0:19:45.09:0,45,907	0/1:26,3:28:3.22:391,0,3	0/0:8,0:8:24.07:0,24,499	1/1:21,0:20:21.38:191,21,0	0/0:16,0:15:28.69:0,29,703	0/0:20,0:16:27.49:0,27,535	0/0:25,0:22:45.39:0,45,973	0/0:11,0:8:12:0,12,233	1/1:20,0:20:17.24:186,17,0	1/1:22,0:21:10.02:194,10,0	0/1:8,0:8:14.33:14,0,19	0/0:3,0:3:6.02:0,6,139	0/0:16,0:15:33.99:0,34,682	0/0:9,0:7:9.50:0,9,222	0/0:12,0:12:27.08:0,27,548	1/1:22,0:22:34.72:279,35,0	1/1:13,0:13:7.48:153,7,0	1/1:8,0:7:2.97:20,3,0
chr10	91383686	.	AAAAG	A	3724	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=9.022;DP=491;FS=0.431;HRun=0;HaplotypeScore=111.1165;InbreedingCoeff=0.9043;MQ=53.57;MQ0=6;MQRankSum=-0.560;QD=17.90;ReadPosRankSum=-3.392;VQSLOD=2.5358;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:28:50.95:0,51,901	0/0:2,0:2:5.51:0,6,76	0/0:32,0:18:30.12:0,30,511	0/0:20,0:7:13.91:0,14,188	1/1:5,14:19:12.65:177,13,0	0/0:26,0:22:48.19:0,48,841	0/0:12,0:11:26.63:0,27,454	1/1:21,10:30:32.87:508,33,0	1/1:4,13:17:15.42:205,15,0	0/0:16,0:15:23.77:0,24,475	0/0:20,0:19:26.19:0,26,727	1/1:23,6:28:65.42:773,65,0	0/0:9,0:9:26.76:0,27,409	1/1:4,16:19:24.01:323,24,0	0/0:16,0:15:6.65:0,7,552	0/0:20,0:16:23.52:0,24,437	0/0:26,0:23:46.70:0,47,840	0/0:12,0:9:14.96:0,15,214	1/1:7,13:20:42.57:468,43,0	1/1:4,18:21:48.15:449,48,0	1/1:5,3:8:10.78:96,11,0	0/0:3,0:3:6.02:0,6,119	0/0:16,0:15:32.98:0,33,546	0/0:9,0:7:9.49:0,9,185	0/0:11,0:11:27.06:0,27,449	1/1:7,14:21:44.98:410,45,0	1/1:12,1:13:25.52:269,26,0	1/1:5,3:7:3.01:48,3,0
chr10	91383687	.	AAAG	A	2560.96	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=8.425;DP=485;FS=0.899;HRun=0;HaplotypeScore=105.9570;InbreedingCoeff=0.7402;MQ=54.81;MQ0=6;MQRankSum=-0.784;QD=10.54;ReadPosRankSum=-4.092;VQSLOD=2.5983;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:26:41.29:0,41,682	0/0:2,0:2:5.05:0,5,60	0/0:34,0:19:14.42:0,14,392	0/0:19,0:7:13.87:0,14,160	1/1:19,0:19:1.63:188,2,0	0/0:25,0:21:23.25:0,23,615	0/0:13,0:12:29.59:0,30,383	1/1:31,0:30:35.47:363,35,0	1/1:16,1:17:4.87:100,5,0	0/0:16,0:15:17.72:0,18,351	0/1:20,0:19:1.04:1,0,503	1/1:25,3:27:45.92:536,46,0	0/0:9,0:9:23.17:0,23,302	1/1:17,3:19:23.90:215,24,0	0/0:15,0:14:6.51:0,7,416	0/1:21,0:17:17.27:17,0,330	0/0:26,0:23:45.03:0,45,681	0/0:13,0:10:17.94:0,18,207	1/1:18,1:19:33.83:361,34,0	1/1:20,2:21:45.01:328,45,0	1/1:8,0:8:8.01:57,8,0	0/0:3,0:3:6.02:0,6,91	0/0:17,0:16:25.61:0,26,420	0/0:9,0:7:9.49:0,9,147	0/0:11,0:11:23.68:0,24,316	1/1:20,0:20:43.19:333,43,0	1/1:11,2:13:17.82:236,18,0	1/1:5,0:4:3:29,3,0
chr10	91383864	.	C	CA	8894.82	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-11.580;DP=608;FS=13.827;HRun=8;HaplotypeScore=64.7349;InbreedingCoeff=0.9588;MQ=75.85;MQ0=0;MQRankSum=0.343;QD=24.44;ReadPosRankSum=0.159;VQSLOD=4.3718;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,39:42:93.28:1073,93,0	1/1:0,7:7:21.06:242,21,0	0/1:21,0:18:0.65:1,0,189	0/0:17,0:14:26.90:0,27,227	1/1:5,25:30:17.30:682,17,0	0/0:23,0:22:54.02:0,54,494	0/0:23,0:23:60.03:0,60,549	1/1:8,24:32:44.73:751,45,0	1/1:2,23:25:66.20:762,66,0	0/0:24,0:24:57.02:0,57,522	0/0:19,0:19:45:0,45,408	1/1:1,18:19:45.12:519,45,0	0/0:18,0:18:48.02:0,48,439	1/1:6,19:25:39.11:446,39,0	1/1:2,13:15:36.11:415,36,0	0/0:36,0:35:93:0,93,840	1/1:2,24:26:69.20:792,69,0	0/0:22,0:20:54.03:0,54,494	1/1:0,19:19:57.15:647,57,0	1/1:6,22:28:61.05:686,61,0	1/1:2,12:14:33.10:381,33,0	0/0:13,0:13:36.02:0,36,329	0/0:16,0:16:39.02:0,39,357	0/0:19,0:18:51.03:0,51,467	0/0:14,0:14:39.02:0,39,357	1/1:4,20:24:32.69:619,33,0	1/1:4,23:28:32.53:602,33,0	1/1:0,9:9:24.07:277,24,0
chr10	91385031	.	AACAC	A	4193.63	PASS	AB=0.832;AC=38;AF=0.704;AN=54;BaseQRankSum=-0.111;DP=623;FS=1.750;HRun=0;HaplotypeScore=146.5787;InbreedingCoeff=0.6280;MQ=61.84;MQ0=10;MQRankSum=-1.331;QD=9.32;ReadPosRankSum=1.012;VQSLOD=3.1183;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:34:24:0,24,367	0/0:11,0:11:10.95:0,11,91	./.	0/0:22,0:15:0:0,0,0	0/1:14,0:13:0:0,0,0	0/1:11,9:21:0.25:302,0,0	1/1:11,11:23:12.04:187,12,0	1/1:22,0:20:0.89:2,1,0	1/1:20,0:20:11.99:103,12,0	1/1:20,10:29:26.96:345,27,0	1/1:7,5:12:15.04:215,15,0	1/1:32,0:32:34.42:311,34,0	1/1:9,9:19:17.48:234,17,0	1/1:29,0:29:29.20:244,29,0	0/0:23,0:42:20.10:0,20,293	1/1:10,20:31:29.64:596,30,0	0/0:8,0:9:12:0,12,138	1/1:8,11:19:23.25:292,23,0	1/1:15,0:14:7.52:60,8,0	0/1:14,0:14:8.93:47,0,9	0/0:29,0:27:5.78:0,6,107	0/1:14,13:30:0.40:190,0,0	1/1:17,3:22:15.04:207,15,0	1/1:15,19:36:24.08:375,24,0	1/1:8,3:12:12.01:162,12,0	1/1:24,0:24:15.87:147,16,0	1/1:13,0:13:17.86:154,18,0	1/1:10,0:9:2.98:21,3,0
chr10	91385062	.	ACACACACACACACT	A	5260.41	PASS	AB=0.995;AC=20;AF=0.357;AN=56;BaseQRankSum=2.355;DP=699;FS=3.834;HRun=0;HaplotypeScore=270.1059;InbreedingCoeff=0.2031;MQ=53.09;MQ0=17;MQRankSum=-2.887;QD=14.33;ReadPosRankSum=-1.799;VQSLOD=3.2269;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:37:53.57:54,0,1433	0/1:15,0:15:32.77:33,0,476	0/0:26,0:9:14.35:0,14,160	0/0:31,0:16:41.21:0,41,611	0/1:12,0:12:41.19:76,0,41	0/0:19,0:18:38.89:0,39,1066	0/0:29,0:29:54.03:0,54,1025	0/1:21,0:19:49.35:225,0,49	1/1:17,0:17:17.36:475,17,0	0/0:29,0:28:78.18:0,78,1866	0/0:11,0:11:30.02:0,30,631	1/1:40,1:41:7.59:1074,8,0	0/0:21,0:21:36.57:0,37,1000	1/1:32,1:33:37.67:874,38,0	0/1:41,0:40:82.04:82,0,1019	0/0:43,0:43:89.07:0,89,2441	0/1:14,0:14:14.82:15,0,718	0/0:22,0:22:47.63:0,48,1000	0/1:16,0:16:61.30:269,0,61	0/1:9,0:9:59.25:135,0,59	1/1:51,0:49:14.47:452,14,0	0/0:28,0:28:36.30:0,36,1079	0/0:21,0:21:48.10:0,48,1051	0/0:39,0:38:68.17:0,68,1685	0/0:13,0:13:33.09:0,33,969	0/1:26,0:26:23.76:741,0,24	1/1:14,1:15:31.98:535,32,0	0/1:17,1:16:33.55:220,0,34
chr10	91385064	.	ACACACACACACT	A	9307.03	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=-3.173;DP=696;FS=2.014;HRun=0;HaplotypeScore=235.4946;InbreedingCoeff=0.7073;MQ=53.49;MQ0=16;MQRankSum=-3.143;QD=25.29;ReadPosRankSum=-2.942;VQSLOD=3.7867;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:38:74.50:74,0,1118	0/1:15,0:15:32.78:33,0,356	0/0:26,0:9:13.31:0,13,158	0/0:30,0:16:41.19:0,41,523	1/1:10,2:12:23.51:229,24,0	0/0:20,0:19:38.89:0,39,841	0/0:29,0:29:54.02:0,54,851	1/1:20,0:18:36.07:423,36,0	1/1:13,4:17:38.59:812,39,0	0/0:28,0:28:80.77:0,81,1413	0/0:10,0:10:27.02:0,27,485	1/1:28,13:41:81.07:1875,81,0	0/0:21,0:21:36.56:0,37,774	1/1:21,10:31:63.54:1470,64,0	0/1:40,0:39:85.53:86,0,810	0/0:43,0:43:89.01:0,89,1885	0/1:14,0:14:14.88:15,0,523	0/0:22,0:22:41.69:0,42,784	1/1:15,1:16:21.30:512,21,0	1/1:8,2:10:13.16:369,13,0	1/1:52,1:51:94.14:917,94,0	0/0:30,0:30:42.04:0,42,903	0/0:18,0:18:42.10:0,42,814	0/0:38,0:37:68.17:0,68,1334	0/0:13,0:13:33.09:0,33,794	1/1:19,7:26:51.64:1230,52,0	1/1:9,6:15:42.01:938,42,0	1/1:19,0:17:26.96:324,27,0
chr10	91385136	.	TCACA	T	8086.30	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=10.333;DP=760;FS=0.000;HRun=0;HaplotypeScore=162.7997;InbreedingCoeff=0.9269;MQ=59.86;MQ0=6;MQRankSum=-0.883;QD=25.59;ReadPosRankSum=1.372;VQSLOD=4.1226;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:11.94:0,12,164	0/0:7,0:7:5.96:0,6,43	0/0:32,0:17:22.84:0,23,302	0/0:37,0:27:28.66:0,29,439	1/1:3,11:14:9.03:150,9,0	0/0:22,0:22:54.08:0,54,1101	0/0:34,0:38:71.42:0,71,1460	1/1:16,16:31:31.06:621,31,0	1/1:5,11:17:33.11:526,33,0	0/0:21,0:21:54.17:0,54,1189	0/0:11,0:11:8.10:0,8,570	1/1:11,43:55:99:1721,105,0	0/0:31,0:30:66.12:0,66,1509	1/1:7,26:34:57.19:905,57,0	0/0:30,0:30:30.74:0,31,434	0/0:61,1:62:85.45:0,85,2990	0/0:4,0:14:6.02:0,6,92	0/0:26,0:26:56.50:0,57,1218	1/1:5,9:15:29.96:364,30,0	1/1:2,9:11:21.07:337,21,0	1/1:18,62:81:99:1887,114,0	0/0:15,0:15:39.11:0,39,800	0/0:14,0:14:30.09:0,30,645	0/0:51,0:51:99:0,123,2621	0/0:14,0:14:33.06:0,33,615	1/1:11,20:31:62.88:882,63,0	1/1:3,10:13:5.06:393,5,0	1/1:3,10:12:18.06:300,18,0
chr10	91385259	.	TTGTC	T	2471.77	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.904;DP=640;FS=59.712;HRun=0;HaplotypeScore=190.6285;InbreedingCoeff=0.9759;MQ=80.69;MQ0=2;MQRankSum=-2.402;QD=29.43;ReadPosRankSum=3.470;VQSLOD=1.4921;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:47.96:752,48,0	1/1:3,3:6:12.04:223,12,0	0/0:33,0:30:72.50:0,73,1686	0/0:40,0:32:57.74:0,58,1785	0/0:5,0:5:12.04:0,12,317	0/0:15,0:15:36.11:0,36,697	0/0:33,0:33:78.25:0,78,1686	0/0:31,0:31:81.28:0,81,2044	0/0:17,0:17:45.15:0,45,1135	0/0:11,0:11:27.09:0,27,683	0/0:8,0:8:24.01:0,24,453	0/0:39,0:38:81.25:0,81,1857	0/0:25,0:25:63.68:0,64,1486	0/0:38,0:37:78.26:0,78,1881	1/1:1,20:21:36.08:635,36,0	0/0:62,0:62:99:0,114,2761	1/1:5,24:29:62.82:1019,63,0	0/0:17,0:17:36.12:0,36,959	0/0:12,0:12:33.06:0,33,723	0/0:8,0:8:18.06:0,18,441	0/0:52,0:52:99:0,108,2670	0/0:11,0:11:27.07:0,27,618	0/0:9,0:9:18.50:0,19,369	0/0:30,0:30:36.12:0,36,849	0/0:13,0:13:20.99:0,21,471	0/0:17,0:17:48.16:0,48,1237	0/0:21,0:21:48.16:0,48,1058	0/0:9,0:9:27.09:0,27,718
chr10	91385279	.	CCACACACACACACACACACACACACACA	C	7201.98	PASS	AB=0.718;AC=22;AF=0.423;AN=52;BaseQRankSum=2.793;DP=568;FS=75.428;HRun=0;HaplotypeScore=352.8516;InbreedingCoeff=0.5018;MQ=58.21;MQ0=18;MQRankSum=-5.730;QD=25.72;ReadPosRankSum=-1.709;VQSLOD=-0.0984;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:30:18.06:0,18,572	./.	0/0:28,0:18:9.03:0,9,198	0/0:32,0:19:12.04:0,12,357	0/0:3,0:3:3.01:0,3,66	1/1:7,4:12:9.03:628,9,0	1/1:22,0:22:23.11:681,23,0	0/0:26,0:24:12.04:0,12,343	0/0:9,0:13:6.64:0,7,55	1/1:7,12:18:21:431,21,0	1/1:6,0:7:9.02:263,9,0	0/1:19,0:37:14.10:14,0,720	1/1:12,11:24:26.72:1637,27,0	0/1:18,0:29:9.58:10,0,413	0/0:15,0:15:18.04:0,18,527	1/1:20,26:47:47.93:2726,48,0	0/0:29,0:29:36.12:0,36,1296	0/1:11,5:15:99:414,0,564	0/0:14,0:14:9.03:0,9,201	0/0:5,0:7:2.35:0,2,75	0/0:45,0:41:41.82:0,42,1152	./.	1/1:5,2:6:3.01:122,3,0	1/1:15,10:24:0.45:1,0,0	1/1:7,8:15:6.02:255,6,0	0/0:14,0:19:34.93:0,35,983	0/1:11,0:16:20.57:21,0,141	0/0:6,0:7:10.80:0,11,178
chr10	91385303	.	A	AGTGCTT	1829.65	PASS	AB=0.954;AC=10;AF=0.185;AN=54;BaseQRankSum=2.806;DP=564;FS=11.765;HRun=0;HaplotypeScore=203.7961;InbreedingCoeff=0.0285;MQ=41.78;MQ0=31;MQRankSum=-4.987;QD=13.26;ReadPosRankSum=1.183;VQSLOD=2.1746;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:39.60:0,40,949	0/0:11,0:10:18.06:0,18,458	0/0:22,0:4:12.04:0,12,270	0/0:43,0:8:18.06:0,18,424	0/0:7,0:7:12.02:0,12,247	0/1:6,0:6:1.64:2,0,20	0/1:18,0:18:6.21:522,0,6	0/0:19,0:17:51.16:0,51,1005	0/0:11,0:11:15.02:0,15,224	0/1:16,1:15:27.67:198,0,28	0/1:4,0:5:8.57:177,0,9	0/0:45,0:44:81.20:0,81,1637	0/1:20,1:21:99:439,0,117	0/0:31,0:29:44.94:0,45,918	0/0:21,0:21:20.78:0,21,525	0/1:34,2:36:99:392,0,406	0/0:38,0:35:84.72:0,85,1897	0/0:10,0:9:18.06:0,18,348	0/0:10,0:8:24.07:0,24,520	0/0:8,0:8:5.99:0,6,101	0/0:62,0:53:80.82:0,81,1883	./.	1/1:6,0:5:4.37:41,4,0	0/1:16,0:15:36:74,0,36	0/1:12,0:12:66.76:122,0,67	0/0:21,0:21:57.20:0,57,1338	0/0:16,0:15:33.11:0,33,591	0/0:8,0:7:21.07:0,21,439
chr10	91385305	.	A	AGTGCTT	1651.04	PASS	AB=0.909;AC=10;AF=0.185;AN=54;BaseQRankSum=4.209;DP=543;FS=18.049;HRun=0;HaplotypeScore=190.2416;InbreedingCoeff=0.3633;MQ=43.24;MQ0=32;MQRankSum=-5.092;QD=17.02;ReadPosRankSum=1.955;VQSLOD=2.1116;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:39.60:0,40,964	0/0:11,0:10:18.06:0,18,458	0/0:23,0:4:12.04:0,12,240	0/0:46,0:9:17.82:0,18,398	0/0:7,0:7:12.51:0,13,285	0/1:5,0:5:23.62:92,0,24	0/1:5,8:12:2.16:647,0,2	0/0:20,0:17:45.15:0,45,1073	0/0:11,0:11:21.06:0,21,346	1/1:15,0:13:16.74:262,17,0	1/1:4,0:4:9.01:95,9,0	0/0:43,0:42:77.38:0,77,1537	0/1:15,0:15:51.55:374,0,52	0/0:31,0:29:48.11:0,48,1016	0/0:21,0:21:20.76:0,21,472	0/1:31,0:31:99:271,0,243	0/0:38,0:35:84.29:0,84,1981	0/0:10,0:9:10.55:0,11,295	0/0:10,0:7:21.07:0,21,527	0/0:8,0:8:6:0,6,144	0/0:64,0:56:75.48:0,75,1895	./.	0/1:4,0:4:0:1,0,0	0/0:12,0:12:0:0,0,0	0/1:9,0:9:13.15:52,0,13	0/0:24,0:24:69.22:0,69,1547	0/0:15,0:14:27.09:0,27,536	0/0:7,0:6:18.02:0,18,370
chr10	91388751	.	T	TAG	13254.09	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-15.866;DP=529;FS=2.897;HRun=0;HaplotypeScore=59.2292;InbreedingCoeff=0.9943;MQ=73.23;MQ0=0;MQRankSum=0.491;QD=46.18;ReadPosRankSum=3.085;VQSLOD=6.4721;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:51.17:955,51,0	1/1:0,6:7:21.07:387,21,0	0/0:11,0:11:24.06:0,24,307	0/0:6,0:6:14.91:0,15,162	0/0:16,0:16:42.14:0,42,615	1/1:1,16:17:42.14:786,42,0	1/1:0,34:34:87.30:1629,87,0	0/0:11,0:11:33.10:0,33,467	0/0:18,0:18:51.17:0,51,748	1/1:0,20:20:57.20:1068,57,0	1/1:0,11:11:24.08:450,24,0	0/0:35,0:35:99:0,99,1454	1/1:2,10:14:27.09:506,27,0	0/0:24,0:24:66.22:0,66,965	1/1:1,24:25:60.21:1124,60,0	1/1:0,19:18:51.17:955,51,0	1/1:2,33:35:87.30:1630,87,0	1/1:0,26:26:66.23:1236,66,0	0/0:13,0:13:36.12:0,36,529	0/0:10,0:10:27.09:0,27,397	0/0:53,0:53:99:0,150,2171	1/1:0,9:9:24.08:449,24,0	1/1:1,9:10:18.06:337,18,0	1/1:0,22:22:63.22:1180,63,0	1/1:0,12:12:29.96:561,30,0	0/0:21,0:21:54.18:0,54,787	0/0:17,0:17:51.16:0,51,731	0/0:7,0:7:21.05:0,21,288
chr10	91391838	.	TGC	T	4251.83	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=4.132;DP=466;FS=9.795;HRun=0;HaplotypeScore=132.6002;InbreedingCoeff=0.6893;MQ=75.46;MQ0=8;MQRankSum=-4.101;QD=10.71;ReadPosRankSum=3.602;VQSLOD=4.3097;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:19:34.06:292,34,0	1/1:6,0:5:4.82:68,5,0	0/0:21,0:13:21.96:0,22,317	0/0:34,0:22:33.44:0,33,605	1/1:7,3:10:9:81,9,0	1/1:15,0:15:27.66:206,28,0	1/1:18,0:18:29.81:213,30,0	1/1:4,19:22:51.17:395,51,0	1/1:6,3:9:17.09:163,17,0	1/1:15,0:15:9.35:154,9,0	./.	1/1:13,11:24:26.59:241,27,0	1/1:18,0:18:37.12:289,37,0	1/1:11,7:18:29.25:280,29,0	1/1:16,0:16:0.89:2,1,0	1/1:35,0:35:8.81:53,9,0	1/1:23,0:22:42.39:297,42,0	1/1:16,0:16:2.92:17,3,0	1/1:2,8:10:18.87:186,19,0	1/1:7,4:10:13.81:107,14,0	1/1:27,1:28:25.89:244,26,0	1/1:9,0:9:17.74:136,18,0	1/1:7,0:7:11.37:95,11,0	1/1:20,0:20:23.77:179,24,0	1/1:13,0:12:16.24:133,16,0	1/1:7,6:13:32.93:293,33,0	1/1:7,6:13:14.15:100,14,0	1/1:3,4:7:5.18:28,5,0
chr10	91391839	.	GCGCGCTCGCTCGCT	G	12344.15	PASS	AB=0.583;AC=49;AF=0.907;AN=54;BaseQRankSum=1.460;DP=467;FS=10.562;HRun=0;HaplotypeScore=172.0799;InbreedingCoeff=0.5663;MQ=73.59;MQ0=10;MQRankSum=-3.782;QD=31.17;ReadPosRankSum=3.980;VQSLOD=3.2887;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:19:45.14:1244,45,0	1/1:6,0:5:12.04:327,12,0	0/0:24,0:13:10.81:0,11,338	0/0:37,0:20:21.98:0,22,1106	1/1:10,0:10:6.40:111,6,0	1/1:14,0:14:29.90:828,30,0	1/1:18,0:18:32.03:925,32,0	1/1:22,0:21:51.90:621,52,0	1/1:9,0:9:20.89:247,21,0	0/1:4,10:14:40.28:609,0,40	./.	1/1:24,0:24:24.99:437,25,0	1/1:18,0:18:42.59:1129,43,0	1/1:18,0:18:30.03:451,30,0	1/1:16,0:16:3.48:93,3,0	1/1:39,0:39:9.03:308,9,0	1/1:23,0:22:57.15:1388,57,0	1/1:16,0:16:3.01:111,3,0	1/1:10,0:10:25.85:231,26,0	1/1:11,0:10:12.97:165,13,0	1/1:27,0:27:24.67:210,25,0	1/1:9,0:9:18.52:495,19,0	1/1:7,0:7:12.04:370,12,0	1/1:20,0:20:28:697,28,0	1/1:12,0:11:17.85:475,18,0	1/1:13,0:13:32.97:496,33,0	1/1:13,0:13:14.52:288,15,0	1/1:7,0:7:8.98:89,9,0
chr10	91391841	.	GCGCTCGCTCGCTCGCTCTCTCTCT	G	12037.30	PASS	AB=1.000;AC=47;AF=0.870;AN=54;BaseQRankSum=2.037;DP=456;FS=14.287;HRun=0;HaplotypeScore=225.0070;InbreedingCoeff=0.4384;MQ=69.52;MQ0=18;MQRankSum=-3.217;QD=31.10;ReadPosRankSum=3.594;VQSLOD=1.9943;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:19:0.07:919,0,0	1/1:7,0:5:12.04:327,12,0	0/0:22,0:10:10.82:0,11,338	0/0:37,0:18:21.60:0,22,1101	1/1:10,0:10:6.40:111,6,0	1/1:14,0:14:29.90:828,30,0	1/1:18,0:18:32.15:925,32,0	1/1:22,0:21:51.90:621,52,0	0/1:10,0:10:99:223,0,141	0/1:12,0:12:99:609,0,126	./.	1/1:24,0:23:25.14:507,25,0	1/1:17,0:17:43.06:1129,43,0	1/1:18,0:18:30.03:521,30,0	1/1:0,0:14:1.25:3,1,0	1/1:0,38:39:9.03:554,9,0	1/1:22,0:21:36.28:907,36,0	1/1:1,15:16:3.01:199,3,0	1/1:10,0:10:25.85:231,26,0	1/1:10,0:9:12.97:165,13,0	1/1:26,0:25:24.67:210,25,0	1/1:9,0:9:18.52:495,19,0	1/1:8,0:7:12.04:370,12,0	1/1:19,0:19:27.52:697,28,0	1/1:12,0:11:17.85:475,18,0	1/1:12,0:12:32.97:496,33,0	1/1:10,0:10:14.52:427,15,0	1/1:7,0:7:8.98:89,9,0
chr10	91391847	.	GCT	G	961.09	PASS	AB=0.932;AC=32;AF=0.593;AN=54;BaseQRankSum=3.924;DP=417;FS=7.039;HRun=0;HaplotypeScore=130.5479;InbreedingCoeff=0.3942;MQ=64.62;MQ0=22;MQRankSum=-3.500;QD=3.89;ReadPosRankSum=3.964;VQSLOD=2.1238;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:18:1.83:0,2,65	0/0:7,0:5:1.33:0,1,16	0/0:19,0:7:7.20:0,7,192	0/0:35,0:16:35.97:0,36,629	1/1:6,3:9:8.50:64,9,0	0/0:14,0:14:0.05:0,0,20	0/1:17,0:17:0.13:0,0,18	1/1:10,10:19:32.16:189,32,0	0/1:5,3:8:21.76:75,0,22	0/0:11,0:11:3.44:0,3,52	./.	1/1:10,11:20:19.80:148,20,0	0/0:15,0:15:0.09:0,0,18	1/1:7,7:14:19.75:156,20,0	1/1:14,0:14:1.82:5,2,0	1/1:39,0:39:5.81:24,6,0	0/0:19,0:18:2.93:0,3,39	0/1:17,0:17:0.47:9,0,0	1/1:8,2:9:0.60:65,1,0	1/1:3,4:6:9.80:47,10,0	1/1:18,1:18:10.13:59,10,0	0/1:8,0:8:0.36:0,0,9	1/1:8,0:7:1.19:4,1,0	0/0:17,0:16:1.41:0,1,22	1/1:11,0:10:2.14:4,2,0	1/1:3,6:9:26.39:195,26,0	1/1:3,5:9:10:50,10,0	1/1:3,4:7:1.97:17,2,0
chr10	91397939	.	GCTCCCCT	G	5896.64	PASS	AB=0.528;AC=20;AF=0.370;AN=54;BaseQRankSum=11.920;DP=377;FS=1.680;HRun=0;HaplotypeScore=99.4179;InbreedingCoeff=0.8113;MQ=78.00;MQ0=0;MQRankSum=-11.251;QD=41.82;ReadPosRankSum=0.224;VQSLOD=4.6902;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.33:0,96,3659	0/0:1,0:1:3.01:0,3,118	0/0:10,0:10:27.09:0,27,802	0/0:13,0:13:23.74:0,24,888	1/1:1,7:8:3.01:30,3,0	0/0:9,0:9:21.07:0,21,743	0/0:27,0:27:72.25:0,72,2716	1/1:2,8:10:21.07:429,21,0	1/1:0,13:13:30.10:718,30,0	0/0:11,0:11:30.10:0,30,1114	0/0:3,0:3:6.02:0,6,236	1/1:2,17:19:36.12:870,36,0	0/0:10,0:10:30.10:0,30,1065	1/1:1,13:14:36.12:868,36,0	0/0:11,0:11:30.08:0,30,997	0/0:14,0:14:33.11:0,33,1273	0/0:22,0:22:57.20:0,57,2141	0/0:33,0:33:87.26:0,87,3140	1/1:5,11:16:33.07:780,33,0	0/1:0,1:1:0:0,0,0	1/1:8,25:33:30.05:559,30,0	0/0:8,0:8:24.08:0,24,906	./.	0/0:22,0:22:54.17:0,54,2034	0/0:6,0:6:15.05:0,15,590	0/1:3,11:15:79.14:814,0,79	1/1:0,9:9:23.66:601,24,0	1/1:0,3:3:9.03:228,9,0
chr10	91399211	.	GGTTTTT	G	175.96	PASS	AB=0.948;AC=8;AF=0.143;AN=56;BaseQRankSum=6.442;DP=343;FS=15.700;HRun=0;HaplotypeScore=77.1703;InbreedingCoeff=-0.0008;MQ=67.16;MQ0=6;MQRankSum=-5.291;QD=1.69;ReadPosRankSum=1.460;VQSLOD=0.0009;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:52.03:0,52,619	0/0:2,0:2:5.85:0,6,62	0/0:28,0:14:35.61:0,36,457	0/0:27,0:10:13.01:0,13,90	0/0:9,0:9:23.96:0,24,294	0/1:15,0:15:17.06:17,0,206	0/1:18,0:18:28.22:28,0,161	0/0:20,0:20:56.55:0,57,860	0/0:7,0:7:21.01:0,21,334	0/1:6,5:11:35.90:120,0,36	1/1:3,0:3:2.80:20,3,0	0/0:13,0:13:29.86:0,30,405	0/1:11,0:11:3.83:4,0,173	0/0:12,0:12:31.57:0,32,421	0/0:7,0:7:20.97:0,21,196	0/0:3,0:3:9:0,9,78	0/1:26,0:25:13.66:14,0,329	0/1:20,0:20:99:100,0,105	0/0:13,0:13:35.28:0,35,415	0/0:2,0:2:5.99:0,6,49	0/0:13,0:13:36.04:0,36,552	0/0:4,0:4:6.87:0,7,50	0/0:3,0:3:3.87:0,4,25	0/0:15,0:15:6.53:0,7,225	0/0:6,0:6:17.87:0,18,144	0/0:13,0:14:39.08:0,39,569	0/0:13,0:13:35.99:0,36,469	0/0:5,0:5:15.02:0,15,261
chr10	91399718	.	A	AT	2843.59	PASS	AB=0.743;AC=22;AF=0.393;AN=56;BaseQRankSum=-6.380;DP=520;FS=0.861;HRun=11;HaplotypeScore=64.7404;InbreedingCoeff=0.7655;MQ=86.43;MQ0=1;MQRankSum=-3.861;QD=16.93;ReadPosRankSum=1.955;VQSLOD=4.7145;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,108,832	0/0:6,0:6:17.88:0,18,133	0/0:39,0:28:36.60:0,37,288	0/0:30,0:23:11.57:0,12,210	0/0:19,0:19:38.79:0,39,302	1/1:3,8:11:3.82:219,4,0	1/1:4,17:21:27.41:409,27,0	0/0:25,0:25:20.73:0,21,333	0/0:7,0:7:17.92:0,18,137	1/1:6,8:15:23.88:227,24,0	1/1:1,8:10:23.88:222,24,0	0/0:20,0:20:56.75:0,57,437	1/1:2,11:13:24.05:244,24,0	0/0:15,0:15:38.82:0,39,299	0/0:18,0:18:50.79:0,51,392	1/1:4,5:9:0.72:169,1,0	0/0:40,0:40:99:0,110,848	1/1:4,21:26:59.95:593,60,0	0/0:20,0:20:35.80:0,36,278	0/1:6,1:7:9.56:10,0,113	0/0:25,2:29:5.92:0,6,390	1/1:1,3:5:8.85:75,9,0	1/1:2,12:14:24.05:243,24,0	0/1:8,13:22:24.32:304,0,24	1/1:3,12:15:33.07:335,33,0	0/0:16,0:17:37.86:0,38,281	0/0:10,0:10:26.89:0,27,209	0/0:15,0:15:26.87:0,27,209
chr10	91400086	.	TTAGATG	T	9686.29	PASS	AB=0.512;AC=21;AF=0.375;AN=56;BaseQRankSum=15.907;DP=615;FS=2.544;HRun=0;HaplotypeScore=133.1866;InbreedingCoeff=0.8729;MQ=83.57;MQ0=2;MQRankSum=-16.824;QD=50.98;ReadPosRankSum=1.038;VQSLOD=5.1910;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,4113	0/0:4,0:4:12.04:0,12,427	0/0:17,0:17:51.17:0,51,1649	0/0:27,0:27:57.87:0,58,2081	0/0:18,0:18:48.15:0,48,1569	1/1:3,17:18:51.13:1124,51,0	1/1:2,29:31:75.18:1666,75,0	0/0:23,0:23:66.22:0,66,2154	0/0:35,0:35:99:0,102,3445	1/1:1,23:24:69.24:1601,69,0	1/1:2,2:4:6.02:142,6,0	0/0:35,0:35:99:0,102,3590	1/1:1,16:17:38.97:921,39,0	0/0:28,0:28:78.27:0,78,2605	0/0:18,0:18:54.19:0,54,1854	0/1:1,21:22:49.80:1215,0,50	0/0:29,0:29:81.28:0,81,2813	1/1:3,17:20:36.12:851,36,0	0/0:23,0:23:69.23:0,69,2258	0/0:11,0:11:30.10:0,30,1069	0/0:73,0:73:99:0,211,7335	1/1:1,4:5:6.02:142,6,0	1/1:1,13:14:33.07:729,33,0	1/1:5,17:22:30.01:658,30,0	1/1:1,10:11:27.09:638,27,0	0/0:22,0:22:60.21:0,60,2119	0/0:17,0:17:51.18:0,51,1795	0/0:2,0:2:6.02:0,6,214
chr10	91400483	.	G	GTTTGT	14828.82	PASS	AB=0.644;AC=49;AF=0.875;AN=56;BaseQRankSum=-4.050;DP=566;FS=10.038;HRun=0;HaplotypeScore=101.7204;InbreedingCoeff=0.1466;MQ=66.80;MQ0=2;MQRankSum=-1.912;QD=27.72;ReadPosRankSum=2.959;VQSLOD=3.6603;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:29:19.58:400,0,20	0/1:0,0:7:19.75:61,0,20	0/1:26,0:16:15.74:16,0,359	0/0:31,0:21:22.98:0,23,248	1/1:1,12:14:24.08:606,24,0	1/1:4,0:30:27.09:603,27,0	1/1:4,0:19:21.07:491,21,0	1/1:6,27:36:89.54:1324,90,0	1/1:2,19:22:27.09:805,27,0	1/1:3,0:20:29:491,29,0	1/1:0,0:9:18.06:324,18,0	1/1:3,12:16:27.09:804,27,0	1/1:1,0:14:11.97:267,12,0	1/1:4,10:16:12.04:357,12,0	1/1:4,0:29:12.04:268,12,0	1/1:2,0:29:45.15:1007,45,0	0/1:8,0:25:47.68:302,0,48	0/1:4,1:19:22.45:250,0,22	1/1:7,17:26:57.19:1133,57,0	1/1:1,12:13:27.09:651,27,0	1/1:2,19:21:24.08:714,24,0	1/1:1,0:9:4.33:193,4,0	1/1:0,0:8:18.06:372,18,0	1/1:0,0:10:9.03:201,9,0	1/1:1,1:16:12.04:268,12,0	1/1:2,19:22:60.18:1402,60,0	1/1:4,20:26:39.13:1161,39,0	1/1:6,14:21:12.04:358,12,0
chr10	91400490	.	T	TG	800.52	PASS	AB=0.961;AC=21;AF=0.375;AN=56;BaseQRankSum=10.196;DP=481;FS=14.294;HRun=0;HaplotypeScore=114.6566;InbreedingCoeff=0.2678;MQ=63.90;MQ0=2;MQRankSum=-9.068;QD=3.67;ReadPosRankSum=5.442;VQSLOD=2.3083;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,3:21:8.12:178,0,8	1/1:6,0:6:5.85:60,6,0	0/0:29,0:18:1.40:0,1,424	0/0:28,0:19:35.26:0,35,405	0/0:12,0:12:21.90:0,22,119	0/1:21,0:21:16.44:56,0,16	0/1:17,0:17:20.28:20,0,126	0/0:28,0:28:70.73:0,71,780	0/0:20,0:20:26.18:0,26,146	1/1:15,0:15:16.24:101,16,0	0/1:8,0:8:4.40:4,0,25	0/0:14,0:14:28.42:0,28,150	0/1:14,0:14:9.36:21,0,9	0/0:14,0:14:17.63:0,18,115	0/1:20,0:20:40.27:40,0,66	1/1:23,0:23:37.43:135,37,0	0/1:17,3:20:72.75:164,0,73	0/1:16,2:18:22.61:90,0,23	0/0:23,0:22:58.62:0,59,532	0/0:14,0:14:31.11:0,31,214	0/0:20,0:20:28.33:0,28,171	1/1:5,0:5:7.49:27,7,0	0/1:10,0:10:23.83:24,0,69	1/1:8,0:8:7.49:27,7,0	1/1:11,0:11:9.98:36,10,0	0/0:23,0:22:38.48:0,38,361	0/0:26,0:26:51.30:0,51,353	0/0:12,0:12:11.61:0,12,63
chr10	91400729	.	AAAAG	A	329.60	PASS	AB=0.896;AC=9;AF=0.161;AN=56;BaseQRankSum=4.035;DP=417;FS=21.101;HRun=0;HaplotypeScore=64.8187;InbreedingCoeff=-0.2263;MQ=49.61;MQ0=13;MQRankSum=1.055;QD=2.64;ReadPosRankSum=1.586;VQSLOD=-0.5310;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:69.65:0,70,822	0/0:8,0:8:11.88:0,12,175	0/0:14,0:2:3.01:0,3,34	0/0:13,0:3:2.85:0,3,24	0/0:13,0:12:9.96:0,10,95	0/1:6,4:10:29.30:90,0,29	0/1:12,6:13:44.90:45,0,53	0/0:33,0:32:53.36:0,53,797	0/0:16,0:16:26.79:0,27,345	0/1:17,2:19:73.93:114,0,74	0/0:7,0:7:2.39:0,2,53	0/0:17,0:17:23.34:0,23,433	0/1:9,0:9:8.53:9,0,49	0/0:11,0:9:11.93:0,12,142	0/0:19,0:18:26.85:0,27,320	0/0:11,0:11:7.47:0,7,94	0/0:24,0:23:56.47:0,56,642	0/1:9,1:10:35.58:36,0,119	0/1:19,0:17:16.10:16,0,322	0/0:11,0:11:23.79:0,24,231	0/0:10,0:9:19.86:0,20,184	0/0:5,0:5:8.75:0,9,51	0/1:12,1:11:53.37:53,0,65	0/1:15,1:16:25.75:26,0,162	0/1:10,1:10:23.56:77,0,24	0/0:13,0:12:32:0,32,420	0/0:17,0:16:29.95:0,30,412	0/0:19,0:19:48.64:0,49,474
chr10	91401047	.	C	CGT	1140.21	PASS	AB=1.000;AC=21;AF=0.389;AN=54;BaseQRankSum=0.933;DP=423;FS=10.987;HRun=0;HaplotypeScore=87.0681;InbreedingCoeff=0.8236;MQ=57.86;MQ0=11;MQRankSum=-3.845;QD=7.00;ReadPosRankSum=-3.858;VQSLOD=1.3360;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:30:47.97:0,48,480	0/0:3,0:5:14.96:0,15,143	0/0:27,0:4:8.97:0,9,80	0/1:29,0:10:16.96:17,0,57	0/0:6,0:5:4.33:0,4,125	1/1:6,0:14:12.67:115,13,0	1/1:7,19:28:14.54:132,15,0	0/0:26,0:29:48.95:0,49,477	0/0:7,0:7:11.60:0,12,104	1/1:5,7:12:23.46:171,23,0	1/1:8,0:8:17.54:99,18,0	0/0:21,0:21:28.89:0,29,266	1/1:2,0:7:5.89:67,6,0	0/0:15,0:16:33.23:0,33,321	0/0:7,0:9:26.19:0,26,221	1/1:4,1:16:8.62:68,9,0	0/0:26,0:36:90.24:0,90,760	1/1:24,0:23:53.70:372,54,0	0/0:14,0:12:29.72:0,30,273	0/0:8,0:9:18.01:0,18,175	0/0:6,0:6:8.77:0,9,68	./.	1/1:6,0:6:17.27:104,17,0	1/1:1,2:11:12.01:150,12,0	1/1:4,0:3:8.66:50,9,0	0/0:11,0:10:19.61:0,20,222	0/0:16,0:16:26.98:0,27,253	0/0:10,0:10:15.86:0,16,144
chr10	91401072	.	C	CT	1631.84	PASS	AB=0.792;AC=24;AF=0.462;AN=52;BaseQRankSum=-4.775;DP=417;FS=0.708;HRun=7;HaplotypeScore=52.6232;InbreedingCoeff=0.6449;MQ=40.07;MQ0=55;MQRankSum=-2.430;QD=8.68;ReadPosRankSum=-1.618;VQSLOD=0.1424;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:33:45.02:0,45,418	0/0:4,0:4:8.97:0,9,77	./.	0/1:15,0:5:13.31:13,0,16	0/1:4,10:13:15.35:59,0,15	0/0:12,0:11:9:0,9,83	0/0:26,0:22:18.01:0,18,170	1/1:16,15:29:42.11:492,42,0	1/1:4,6:8:15.05:180,15,0	0/0:10,0:9:12.01:0,12,116	0/0:11,0:9:11.23:0,11,115	1/1:10,12:20:18.05:214,18,0	1/1:6,0:4:0.47:1,0,0	1/1:11,2:13:11.98:125,12,0	0/0:18,0:16:21.01:0,21,194	0/0:13,0:10:2.95:0,3,29	0/0:38,0:32:45.03:0,45,423	0/0:24,0:20:28.42:0,28,286	1/1:11,8:14:21.53:252,22,0	1/1:6,5:8:3.01:36,3,0	1/1:5,5:7:9.01:97,9,0	./.	0/0:5,0:2:3:0,3,29	0/0:13,0:11:20.98:0,21,192	0/0:7,0:4:3:0,3,29	1/1:10,3:8:8.99:91,9,0	1/1:5,8:13:18.06:218,18,0	1/1:9,2:7:4.37:39,4,0
chr10	91401255	.	TTTTC	T	474.27	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=1.038;DP=314;FS=2.468;HRun=0;HaplotypeScore=75.9068;InbreedingCoeff=0.5701;MQ=63.96;MQ0=8;MQRankSum=-2.210;QD=10.78;ReadPosRankSum=0.121;VQSLOD=2.8186;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,2:11:21.03:228,21,0	1/1:2,0:2:5.91:38,6,0	0/0:24,0:8:11.66:0,12,100	0/0:29,0:15:6.53:0,7,328	0/0:5,0:5:14.89:0,15,125	0/0:11,0:11:23.95:0,24,364	0/0:8,0:7:11.75:0,12,187	0/0:41,0:37:69.53:0,70,898	0/0:8,0:7:12.96:0,13,190	0/0:8,0:8:8.93:0,9,126	0/0:4,0:4:5.19:0,5,22	0/0:17,0:15:29.30:0,29,360	0/0:5,0:5:11.99:0,12,185	0/0:9,0:8:2.97:0,3,47	1/1:6,1:7:5.98:56,6,0	0/0:7,0:7:14.92:0,15,219	1/1:17,2:18:31.32:289,31,0	0/0:19,0:18:31.67:0,32,428	0/0:15,0:14:33.23:0,33,429	0/0:4,0:4:4.23:0,4,37	0/0:2,0:2:5.99:0,6,48	0/0:1,0:1:2.99:0,3,24	0/1:5,0:5:7.40:7,0,37	0/0:8,0:8:15.49:0,15,208	0/0:9,0:9:13.52:0,14,185	0/0:15,0:15:44.74:0,45,559	0/0:16,0:16:44.46:0,44,659	0/0:5,0:5:0.16:0,0,33
chr10	91401276	.	TGGTC	T	3502.87	PASS	AB=0.806;AC=39;AF=0.722;AN=54;BaseQRankSum=0.457;DP=297;FS=30.120;HRun=0;HaplotypeScore=66.9191;InbreedingCoeff=0.0306;MQ=49.36;MQ0=15;MQRankSum=-0.769;QD=13.85;ReadPosRankSum=1.137;VQSLOD=1.5091;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:17:17.83:229,18,0	1/1:1,0:1:2.90:16,3,0	0/0:14,1:5:7.69:0,8,30	0/0:23,0:8:16.96:0,17,191	0/0:6,0:6:8.09:0,8,74	1/1:11,0:12:21.92:167,22,0	1/1:7,0:8:17.75:231,18,0	0/1:28,8:33:99:392,0,233	0/1:8,1:8:31.46:61,0,31	1/1:0,2:3:9.02:107,9,0	1/1:0,0:2:6.01:73,6,0	0/1:14,1:12:60.89:198,0,61	1/1:6,0:6:6.03:36,6,0	0/1:2,4:5:5.65:108,0,6	0/1:5,6:12:22.75:80,0,23	1/1:4,0:4:10.21:111,10,0	1/1:19,3:24:38.26:460,38,0	0/1:18,0:17:6.58:213,0,7	0/1:12,2:13:86.79:87,0,220	0/1:4,2:7:33.86:34,0,73	1/1:1,0:1:3.01:53,3,0	./.	1/1:3,0:4:12.04:180,12,0	1/1:5,0:6:6.74:63,7,0	1/1:1,1:3:8.06:94,8,0	0/1:16,1:18:82.67:231,0,83	1/1:12,0:11:5.05:178,5,0	1/1:5,3:8:3.26:100,3,0
chr10	91401291	.	T	TTC	452.22	PASS	AB=1.000;AC=8;AF=0.160;AN=50;BaseQRankSum=1.259;DP=182;FS=1.076;HRun=0;HaplotypeScore=42.6975;InbreedingCoeff=0.4944;MQ=50.77;MQ0=13;MQRankSum=-1.852;QD=11.03;ReadPosRankSum=0.872;VQSLOD=3.2169;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,10:14:19.30:298,19,0	./.	0/1:6,0:1:0:0,0,0	0/0:16,0:6:5.55:0,6,41	0/0:5,0:5:5.95:0,6,59	0/0:7,0:7:8.33:0,8,51	0/0:8,0:7:17.68:0,18,114	0/0:15,0:15:38.98:0,39,436	0/0:3,0:3:9.02:0,9,106	0/1:5,0:5:3.02:3,0,79	0/0:2,0:2:5.80:0,6,33	0/0:6,0:4:9.03:0,9,112	0/0:3,0:3:2.98:0,3,21	0/0:3,0:3:5.84:0,6,79	1/1:3,2:6:9.03:147,9,0	0/0:4,0:4:11.96:0,12,95	1/1:8,2:8:11.21:130,11,0	0/0:15,0:12:23.94:0,24,217	0/0:15,0:15:38.74:0,39,471	0/0:6,0:6:9.02:0,9,105	./.	./.	0/0:3,0:3:4.82:0,5,30	0/0:6,0:5:8.54:0,9,68	0/0:4,0:3:5.54:0,6,33	0/0:11,0:11:20.15:0,20,241	0/0:2,0:2:2.99:0,3,40	0/0:6,0:5:2.67:0,3,36
chr10	91401519	.	C	CT	359.65	PASS	AB=0.922;AC=24;AF=0.444;AN=54;BaseQRankSum=1.520;DP=172;FS=2.561;HRun=14;HaplotypeScore=26.2308;InbreedingCoeff=0.2824;MQ=40.24;MQ0=11;MQRankSum=-2.490;QD=4.18;ReadPosRankSum=-2.066;VQSLOD=-0.5942;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:13:9.57:10,0,10	1/1:1,0:1:3:25,3,0	0/1:10,0:3:5.84:7,0,6	./.	0/0:3,0:4:7.92:0,8,42	0/1:8,1:9:3.68:38,0,4	1/1:3,0:2:2.80:13,3,0	0/0:27,1:24:7.71:0,8,155	0/0:2,1:2:2.96:0,3,19	1/1:3,2:4:6:53,6,0	1/1:0,2:2:6:53,6,0	0/1:4,1:4:15.90:16,0,32	1/1:0,1:1:3:26,3,0	0/1:3,1:4:13.47:20,0,13	0/0:2,0:2:2.37:0,2,8	1/1:2,1:4:3:26,3,0	1/1:12,0:10:1.18:26,1,0	1/1:5,5:10:19.12:148,19,0	0/0:13,1:14:8.09:0,8,170	0/0:6,0:6:11.40:0,11,68	0/0:2,0:2:2.96:0,3,19	0/0:0,0:1:2.04:0,2,6	1/1:1,2:2:6:53,6,0	0/0:2,0:2:2.60:0,3,10	0/0:5,0:5:8.69:0,9,51	0/0:5,1:4:2.93:0,3,19	0/0:3,0:3:5.90:0,6,37	0/1:2,0:2:0:0,0,0
chr10	91402578	.	ATGTGTGTGTGTGTGTGTGTGTG	A	1314.40	PASS	AB=0.600;AC=7;AF=0.269;AN=26;BaseQRankSum=0.340;DP=130;FS=6.254;HRun=0;HaplotypeScore=77.5974;InbreedingCoeff=0.4457;MQ=36.97;MQ0=16;MQRankSum=0.856;QD=34.59;ReadPosRankSum=0.567;VQSLOD=1.3316;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:10:5.75:0,6,48	./.	./.	./.	./.	0/0:4,0:4:8.73:0,9,628	0/0:4,0:4:0.47:0,0,1	1/1:10,16:22:47.76:825,48,0	./.	0/0:5,0:5:12.04:0,12,1046	./.	./.	0/0:6,0:6:2.29:0,2,181	./.	./.	0/0:4,0:4:5.51:0,6,276	0/0:10,0:5:3.01:0,3,74	0/0:15,0:14:20.80:0,21,1240	0/1:1,2:3:99:215,0,246	./.	./.	./.	./.	0/0:6,0:6:5.63:0,6,30	./.	1/1:2,4:5:12.02:207,12,0	1/1:0,3:3:3.01:175,3,0	./.
chr10	91402800	.	GT	G	4184.97	PASS	AB=0.588;AC=29;AF=0.537;AN=54;BaseQRankSum=-11.032;DP=412;FS=9.673;HRun=12;HaplotypeScore=52.8480;InbreedingCoeff=0.8923;MQ=71.28;MQ0=4;MQRankSum=0.229;QD=16.94;ReadPosRankSum=2.044;VQSLOD=4.5431;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:23:50.63:394,51,0	1/1:0,6:6:17.93:139,18,0	0/0:16,0:13:4.25:0,4,32	0/0:12,0:10:14.26:0,14,119	1/1:2,10:13:21.05:140,21,0	0/0:3,0:19:36.93:0,37,185	0/0:4,0:14:28.55:0,29,151	1/1:4,24:29:73.46:544,73,0	1/1:3,15:18:41.83:325,42,0	0/0:4,0:18:42.90:0,43,236	0/0:4,0:10:22.89:0,23,139	1/1:2,14:17:10.45:254,10,0	0/0:3,0:10:22.85:0,23,130	1/1:0,9:9:23.91:186,24,0	1/1:2,13:16:37.89:284,38,0	0/0:2,0:15:31.25:0,31,157	1/1:5,16:22:49.83:377,50,0	0/0:2,0:19:42.78:0,43,230	0/1:6,14:20:9.25:273,0,9	1/1:0,8:8:20.92:163,21,0	1/1:3,18:21:53.79:418,54,0	./.	0/0:0,0:6:17.04:0,17,86	0/0:1,0:8:11.36:0,11,57	0/0:1,0:13:31.25:0,31,157	1/1:3,10:15:17.47:201,17,0	1/1:1,12:13:26.89:209,27,0	1/1:3,14:17:35.85:279,36,0
chr10	91402984	.	CATCCTTCTCTCCCAAGTCATGGCA	C	6248.32	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.479;DP=584;FS=8.217;HRun=0;HaplotypeScore=354.6497;InbreedingCoeff=0.9890;MQ=67.70;MQ0=0;MQRankSum=-9.472;QD=104.14;ReadPosRankSum=3.652;VQSLOD=3.4064;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:27.09:1706,27,0	1/1:0,7:7:12.04:791,12,0	0/0:31,0:27:72.77:0,73,4267	0/0:24,0:24:72.25:0,72,4972	0/0:16,0:16:45.15:0,45,4456	0/0:20,0:20:60.21:0,60,6137	0/0:25,0:25:66.21:0,66,6433	0/0:27,0:27:81.26:0,81,6180	0/0:17,0:17:48.15:0,48,4490	0/0:29,0:29:87.29:0,87,7997	0/0:11,0:11:33.11:0,33,3358	0/0:39,0:39:99:0,117,12172	0/0:20,0:20:57.20:0,57,6122	0/0:18,0:18:54.17:0,54,5171	1/1:0,22:22:39.13:2571,39,0	0/0:23,0:23:69.22:0,69,6742	1/1:1,14:15:21.07:1180,21,0	0/0:27,0:27:78.27:0,78,7306	0/0:18,0:18:54.19:0,54,4643	0/0:8,0:8:24.08:0,24,2712	0/0:49,0:49:99:0,144,13527	0/0:16,0:16:45.15:0,45,4241	0/0:15,0:15:45.14:0,45,4698	0/0:19,0:19:57.20:0,57,5142	0/0:11,0:11:30.10:0,30,2746	0/0:24,0:24:72.24:0,72,6910	0/0:24,0:24:66.23:0,66,7189	0/0:12,0:12:33.11:0,33,2934
chr10	91403871	.	GT	G	4763.94	PASS	AB=0.982;AC=40;AF=0.714;AN=56;BaseQRankSum=8.429;DP=543;FS=0.364;HRun=1;HaplotypeScore=144.9118;InbreedingCoeff=-0.1956;MQ=70.06;MQ0=0;MQRankSum=3.250;QD=9.02;ReadPosRankSum=5.051;VQSLOD=2.3916;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:41:64.86:507,65,0	1/1:3,0:3:8.85:57,9,0	0/1:12,0:12:41.67:42,0,52	0/1:15,0:15:62.33:109,0,62	1/1:18,0:18:26.60:226,27,0	0/1:24,1:25:99:156,0,387	0/1:29,2:31:99:182,0,563	0/1:28,0:28:46.93:144,0,47	1/1:17,0:17:30.26:221,30,0	0/1:32,1:33:99:172,0,582	0/1:19,0:19:79.08:79,0,365	1/1:20,0:20:38.28:285,38,0	0/1:13,0:13:99:120,0,159	1/1:25,0:25:53.42:364,53,0	1/1:27,0:27:49.12:350,49,0	0/1:24,1:25:97.05:97,0,507	1/1:19,0:19:31.05:239,31,0	0/1:7,0:7:24.08:24,0,90	1/1:14,1:15:40.47:206,40,0	1/1:7,0:7:17.10:94,17,0	1/1:38,0:38:29.54:398,30,0	0/1:17,0:17:48.82:49,0,419	0/0:15,0:15:22.91:0,23,571	0/1:9,1:10:39.29:39,0,127	0/1:10,0:10:8.45:8,0,310	1/1:19,0:19:46.88:231,47,0	1/1:27,0:27:33.28:296,33,0	0/1:7,0:7:0.94:67,0,1
chr10	91404181	.	C	CT	1798.71	PASS	AB=0.709;AC=29;AF=0.518;AN=56;BaseQRankSum=-0.521;DP=256;FS=0.784;HRun=3;HaplotypeScore=81.6772;InbreedingCoeff=0.6368;MQ=52.67;MQ0=0;MQRankSum=-2.397;QD=12.58;ReadPosRankSum=0.514;VQSLOD=1.9769;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,6:9:16.79:158,17,0	1/1:0,2:2:6.02:72,6,0	0/0:10,0:10:17.55:0,18,208	0/0:2,0:2:4.56:0,5,40	0/0:14,0:14:14.51:0,15,98	1/1:6,14:19:24.07:289,24,0	0/1:3,8:11:3.56:161,0,4	0/1:26,1:26:12.62:13,0,248	0/0:13,0:13:21.35:0,21,151	1/1:3,5:9:15.33:143,15,0	1/1:0,3:3:3.01:36,3,0	0/0:8,0:7:20.88:0,21,151	0/1:2,5:7:6.58:117,0,7	0/0:8,0:8:20.65:0,21,148	1/1:7,8:15:16.36:318,16,0	1/1:6,6:11:20.73:257,21,0	1/1:1,5:6:6.02:70,6,0	1/1:1,9:10:14.56:180,15,0	0/0:9,0:9:14.59:0,15,92	0/0:12,1:13:17.53:0,18,171	0/0:6,0:6:8.17:0,8,55	1/1:0,4:4:6.02:72,6,0	1/1:1,3:4:6.86:58,7,0	1/1:0,2:2:2.97:20,3,0	1/1:0,2:2:3.01:36,3,0	0/0:13,0:13:29.10:0,29,203	0/0:14,0:14:35.66:0,36,247	0/0:3,0:3:5.64:0,6,30
chr10	91404280	.	G	GT	2161.28	PASS	AB=0.723;AC=41;AF=0.854;AN=48;BaseQRankSum=2.731;DP=197;FS=45.120;HRun=1;HaplotypeScore=44.4136;InbreedingCoeff=0.0280;MQ=19.31;MQ0=66;MQRankSum=-0.759;QD=13.10;ReadPosRankSum=-1.303;VQSLOD=-0.1461;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,4:10:35.83:36,0,69	0/0:3,0:1:0:0,0,0	./.	./.	1/1:4,8:8:12.54:121,13,0	1/1:2,15:9:18.06:269,18,0	1/1:2,3:2:3.01:45,3,0	1/1:13,8:9:18.03:245,18,0	1/1:3,3:3:6.02:90,6,0	1/1:3,5:4:12.04:179,12,0	1/1:3,3:5:8.94:85,9,0	1/1:2,5:5:5.98:65,6,0	1/1:0,5:4:3.01:45,3,0	1/1:2,3:2:3.01:39,3,0	1/1:2,4:4:3.01:45,3,0	1/1:1,3:2:6.02:79,6,0	0/0:2,1:2:3.01:0,3,39	1/1:0,2:2:3.01:45,3,0	0/1:5,1:2:32.92:39,0,33	1/1:1,4:4:5.98:65,6,0	./.	1/1:2,1:2:2.76:45,3,0	1/1:1,2:1:2.97:20,3,0	./.	1/1:3,4:5:9.03:135,9,0	0/1:3,8:10:14.85:290,0,15	1/1:5,3:4:9.03:128,9,0	1/1:3,4:5:14.97:165,15,0
chr10	91404291	.	C	CATGT	4484.32	PASS	AB=0.763;AC=41;AF=0.891;AN=46;BaseQRankSum=3.547;DP=206;FS=49.287;HRun=0;HaplotypeScore=60.3520;InbreedingCoeff=-0.0152;MQ=21.17;MQ0=55;MQRankSum=-1.106;QD=24.24;ReadPosRankSum=-2.784;VQSLOD=2.3111;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,4:11:70.69:71,0,103	1/1:4,1:3:6.02:155,6,0	./.	./.	1/1:6,7:9:15.05:398,15,0	1/1:5,11:8:12.04:319,12,0	1/1:3,2:2:3.01:80,3,0	1/1:14,4:7:18.06:411,18,0	1/1:4,2:3:3.01:80,3,0	1/1:3,6:5:12.04:320,12,0	1/1:7,5:11:6.02:159,6,0	1/1:0,5:3:6.02:159,6,0	1/1:0,5:4:3.01:80,3,0	1/1:4,1:2:3.01:80,3,0	1/1:3,2:3:3.01:80,3,0	1/1:2,3:3:9.03:237,9,0	0/0:2,1:2:3.01:0,3,56	./.	0/1:4,1:3:49.97:74,0,50	1/1:3,8:10:6.02:159,6,0	./.	1/1:1,2:2:6.02:155,6,0	1/1:2,5:5:6.02:159,6,0	./.	1/1:5,3:6:6.02:159,6,0	0/1:7,5:11:31.91:512,0,32	1/1:5,6:7:12.04:319,12,0	1/1:3,4:5:12.04:319,12,0
chr10	91405197	.	T	TGA	53.28	PASS	AB=0.600;AC=3;AF=0.088;AN=34;BaseQRankSum=2.171;DP=189;FS=19.336;HRun=0;HaplotypeScore=53.8586;InbreedingCoeff=0.1274;MQ=79.54;MQ0=18;MQRankSum=-0.540;QD=6.66;ReadPosRankSum=2.224;VQSLOD=1.2642;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:11:33.11:0,33,452	./.	0/0:65,0:16:28.15:0,28,303	0/0:58,0:19:24.71:0,25,322	1/1:0,2:2:3.35:16,3,0	0/0:6,0:6:17.98:0,18,192	./.	0/0:1,0:1:2.98:0,3,22	./.	0/0:5,0:5:12.03:0,12,168	./.	0/0:1,0:1:3:0,3,26	0/0:2,0:1:3.01:0,3,32	0/0:1,0:1:3.01:0,3,42	0/0:1,0:1:3.01:0,3,49	./.	0/0:14,0:14:33.11:0,33,490	0/0:5,0:5:11.94:0,12,119	0/0:5,0:3:6.02:0,6,86	./.	./.	./.	./.	./.	0/0:2,0:2:6.02:0,6,97	0/0:1,0:1:3.01:0,3,32	./.	0/1:2,4:6:30.27:120,0,30
chr10	91405245	.	CT	C	114.93	PASS	AC=8;AF=0.333;AN=24;BaseQRankSum=-2.045;DP=127;FS=8.392;HRun=14;HaplotypeScore=23.6093;InbreedingCoeff=0.4628;MQ=46.74;MQ0=13;MQRankSum=-1.119;QD=3.96;ReadPosRankSum=1.042;VQSLOD=-0.7581;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,6:11:16.84:108,17,0	./.	0/0:29,1:6:0:0,0,0	0/0:34,0:7:0:0,0,0	./.	0/0:6,0:4:5.46:0,5,54	0/0:1,0:1:0:0,0,0	./.	./.	0/0:3,0:3:3:0,3,28	0/0:2,0:2:5.49:0,5,25	./.	./.	./.	1/1:1,1:2:2.97:21,3,0	./.	1/1:6,5:10:8.88:61,9,0	0/0:7,1:7:3.46:0,3,24	./.	./.	./.	./.	./.	./.	./.	./.	1/1:2,0:1:2.96:19,3,0	0/0:2,0:2:2.50:0,2,9
chr10	91405697	.	CA	C	229.70	PASS	AB=1.000;AC=37;AF=0.841;AN=44;BaseQRankSum=5.645;DP=128;FS=3.674;HRun=1;HaplotypeScore=66.5451;InbreedingCoeff=0.4847;MQ=81.39;MQ0=0;MQRankSum=-6.532;QD=2.50;ReadPosRankSum=4.029;VQSLOD=-0.4146;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:3:2.22:7,2,0	./.	0/0:10,0:10:25.78:0,26,170	0/0:13,0:12:15.72:0,16,105	1/1:2,0:2:2.50:9,2,0	1/1:6,0:4:8.70:27,9,0	1/1:4,0:4:8.48:26,8,0	0/1:14,0:14:6.35:6,0,7	1/1:3,0:3:4.72:17,5,0	1/1:4,0:4:1.31:4,1,0	./.	./.	1/1:5,0:5:8.51:26,9,0	1/1:5,0:5:9:31,9,0	1/1:5,0:5:5.84:24,6,0	1/1:6,0:6:12.11:36,12,0	./.	1/1:1,0:1:1.25:3,1,0	0/0:7,0:7:11.56:0,12,40	1/1:4,0:4:3.19:13,3,0	1/1:3,1:4:2.22:7,2,0	./.	./.	1/1:4,0:4:9.58:33,10,0	1/1:1,2:3:1.98:6,2,0	1/1:4,2:6:7.10:20,7,0	1/1:9,0:9:17.97:54,18,0	1/1:3,0:3:4.04:12,4,0
chr10	91405740	.	CA	C	3824.15	PASS	AB=1.000;AC=55;AF=0.982;AN=56;BaseQRankSum=-1.291;DP=216;FS=0.000;HRun=1;HaplotypeScore=143.3641;InbreedingCoeff=-0.0465;MQ=88.06;MQ0=0;MQRankSum=0.126;QD=17.70;ReadPosRankSum=2.907;VQSLOD=3.9817;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:8:14.98:124,15,0	1/1:0,4:4:11.90:88,12,0	1/1:11,0:11:29.02:124,29,0	0/1:13,0:13:12.49:156,0,12	1/1:1,11:12:13.52:184,14,0	1/1:1,10:9:23.94:191,24,0	1/1:1,13:12:32.89:258,33,0	1/1:1,19:20:56.17:386,56,0	1/1:0,4:4:8.98:72,9,0	1/1:0,10:10:26.77:196,27,0	1/1:0,4:4:11.97:96,12,0	1/1:0,4:4:8.89:64,9,0	1/1:1,5:6:11.92:89,12,0	1/1:0,12:12:35.89:284,36,0	1/1:0,6:6:17.96:144,18,0	1/1:0,7:7:20.94:165,21,0	1/1:0,5:5:11.21:95,11,0	1/1:0,2:2:5.95:42,6,0	1/1:1,6:6:14.69:95,15,0	1/1:0,4:4:11.96:94,12,0	1/1:0,10:10:5.94:43,6,0	1/1:0,7:7:20.97:172,21,0	1/1:0,4:4:11.99:101,12,0	1/1:0,4:4:8.32:51,8,0	1/1:0,4:4:11.93:91,12,0	1/1:0,10:9:26.75:192,27,0	1/1:1,8:9:23.90:183,24,0	1/1:0,3:3:5.98:46,6,0
chr10	91405801	.	GA	G	2176.35	PASS	AB=0.536;AC=47;AF=0.940;AN=50;BaseQRankSum=3.591;DP=150;FS=0.000;HRun=1;HaplotypeScore=207.1300;InbreedingCoeff=0.0425;MQ=35.17;MQ0=0;MQRankSum=1.462;QD=14.81;ReadPosRankSum=2.684;VQSLOD=3.5823;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:28.28:242,28,0	1/1:0,5:5:13.21:97,13,0	./.	0/0:1,0:1:0:0,0,0	1/1:0,10:10:19.49:145,19,0	1/1:0,2:2:5.99:48,6,0	1/1:2,12:14:16.53:176,17,0	0/1:2,13:14:37.43:67,0,37	1/1:0,6:6:17.96:145,18,0	./.	./.	1/1:0,3:3:8.97:71,9,0	1/1:0,1:1:2.99:24,3,0	1/1:0,13:13:35.91:287,36,0	1/1:0,3:3:8.98:72,9,0	1/1:0,4:4:11.96:93,12,0	1/1:0,7:6:14.70:105,15,0	1/1:0,3:2:5.96:43,6,0	1/1:0,4:4:9.43:76,9,0	1/1:0,6:6:11.96:93,12,0	1/1:0,5:5:5.93:47,6,0	1/1:3,2:5:5.99:49,6,0	1/1:0,3:3:2.99:23,3,0	1/1:1,4:5:5.97:33,6,0	1/1:1,2:3:2.99:24,3,0	1/1:1,9:9:6.87:167,7,0	1/1:0,4:4:9.86:73,10,0	1/1:0,3:3:8.96:68,9,0
chr10	91405972	.	TCC	T	1000.98	PASS	AC=20;AF=0.556;AN=36;BaseQRankSum=0.483;DP=152;FS=0.941;HRun=11;HaplotypeScore=40.2271;InbreedingCoeff=0.6957;MQ=84.19;MQ0=0;MQRankSum=-1.852;QD=13.00;ReadPosRankSum=0.900;VQSLOD=0.7148;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:12:7.49:0,7,26	0/0:3,0:3:2.96:0,3,19	0/0:12,0:10:14.91:0,15,182	0/0:10,0:7:7.26:0,7,45	1/1:1,3:4:5.91:52,6,0	./.	0/0:5,0:5:0:0,0,0	1/1:6,12:17:33.53:313,34,0	1/1:2,6:8:15.01:160,15,0	./.	./.	1/1:1,7:8:18.04:191,18,0	./.	1/1:2,6:8:8.98:96,9,0	0/0:3,0:7:15.84:0,16,69	./.	0/0:4,0:8:10.36:0,10,49	./.	1/1:4,3:7:3.75:78,4,0	1/1:1,3:4:9.02:96,9,0	1/1:6,8:14:5.86:64,6,0	./.	./.	0/0:5,0:6:11.73:0,12,81	./.	./.	1/1:1,2:3:3.01:32,3,0	1/1:1,2:3:5.98:64,6,0
chr10	91406324	.	T	TACACACAC	4566.52	PASS	AB=0.695;AC=29;AF=0.537;AN=54;BaseQRankSum=-5.470;DP=737;FS=1.332;HRun=0;HaplotypeScore=204.1666;InbreedingCoeff=0.4538;MQ=66.54;MQ0=3;MQRankSum=-4.676;QD=8.87;ReadPosRankSum=-1.084;VQSLOD=3.9073;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,1:41:6.02:169,6,0	1/1:1,5:6:5.93:222,6,0	0/1:37,0:21:51.99:52,0,54	0/0:50,0:32:6.59:0,7,381	1/1:8,0:26:41.88:347,42,0	0/0:2,0:17:37.84:0,38,256	0/1:7,0:35:99:103,0,152	0/1:28,0:30:6.34:289,0,6	1/1:5,0:39:56.83:578,57,0	0/1:14,0:36:49.31:49,0,399	0/0:1,0:12:26.23:0,26,201	0/1:5,0:13:3.65:63,0,4	0/0:7,0:20:4.64:0,5,174	1/1:5,0:19:29.96:246,30,0	1/1:8,13:28:18.06:599,18,0	0/0:12,0:30:47.47:0,47,378	./.	0/0:12,0:28:11.41:0,11,154	1/1:10,0:18:32.51:315,33,0	1/1:8,0:20:23.97:234,24,0	0/1:16,0:48:1.86:365,0,2	0/0:4,0:17:9.40:0,9,124	0/0:5,0:13:23.38:0,23,195	0/1:9,0:35:47.36:47,0,162	0/0:2,0:17:31.93:0,32,171	1/1:5,0:26:25.64:414,26,0	1/1:9,0:39:28.94:316,29,0	1/1:3,0:14:8.32:157,8,0
chr10	91406477	.	CTGTGTGTGTGTGTGTG	C	2923.87	PASS	AB=0.893;AC=23;AF=0.460;AN=50;BaseQRankSum=5.594;DP=628;FS=13.911;HRun=0;HaplotypeScore=263.1030;InbreedingCoeff=0.6533;MQ=60.50;MQ0=14;MQRankSum=-3.651;QD=10.01;ReadPosRankSum=-2.713;VQSLOD=0.6972;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:32:0.70:1,0,50	0/1:8,0:9:2.45:2,0,55	./.	./.	1/1:23,5:30:12.04:388,12,0	0/0:18,0:17:18.01:0,18,288	0/0:26,0:26:12.03:0,12,252	./.	1/1:16,4:20:9.50:393,10,0	0/0:27,0:30:33.05:0,33,741	0/0:10,0:11:12.02:0,12,279	1/1:15,3:18:2.91:131,3,0	0/0:21,0:25:5.52:0,6,397	1/1:17,3:19:3.01:131,3,0	1/1:13,0:21:16.69:129,17,0	0/0:19,0:26:13.05:0,13,280	0/1:19,0:21:58.81:101,0,59	0/0:6,0:5:6.02:0,6,239	1/1:22,4:25:16.75:531,17,0	1/1:24,5:29:8.90:276,9,0	1/1:37,1:37:8.48:163,8,0	0/0:21,0:25:33.06:0,33,757	0/0:14,0:18:14.61:0,15,313	0/0:25,0:27:15.05:0,15,383	0/0:8,0:13:15.04:0,15,317	0/0:28,0:27:7.52:0,8,147	1/1:13,5:18:18.06:766,18,0	1/1:7,0:7:9.02:94,9,0
chr10	91406530	.	T	TCC	13157.26	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.508;DP=524;FS=1.778;HRun=3;HaplotypeScore=115.0486;InbreedingCoeff=0.7610;MQ=67.32;MQ0=14;MQRankSum=-3.974;QD=28.98;ReadPosRankSum=1.976;VQSLOD=4.4181;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:45.49:621,45,0	1/1:5,0:5:15.02:207,15,0	0/0:36,0:11:20.83:0,21,294	0/0:34,0:19:35.98:0,36,539	1/1:23,0:23:48.11:658,48,0	1/1:20,0:20:57.18:912,57,0	1/1:18,0:18:51.15:806,51,0	1/1:13,0:12:33.11:512,33,0	1/1:16,0:16:44.75:576,45,0	1/1:5,22:28:74.72:973,75,0	1/1:2,21:23:14.92:137,15,0	1/1:11,0:11:21.02:317,21,0	1/1:13,0:13:33.09:486,33,0	1/1:14,0:13:27.05:370,27,0	1/1:14,0:14:35.94:417,36,0	1/1:28,0:28:71.72:1075,72,0	1/1:2,17:19:9.01:93,9,0	1/1:8,0:8:2.48:306,2,0	1/1:21,0:21:57.15:817,57,0	1/1:21,0:21:51.05:704,51,0	1/1:2,15:17:2.98:25,3,0	1/1:11,0:11:23.50:272,24,0	1/1:17,0:17:35.93:550,36,0	1/1:8,16:23:5.71:56,6,0	1/1:14,0:14:32.85:426,33,0	1/1:2,19:19:48.16:716,48,0	1/1:21,0:21:59.80:722,60,0	1/1:9,0:9:27.08:404,27,0
chr10	91406533	.	C	CCC	13177.40	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.327;DP=534;FS=2.924;HRun=2;HaplotypeScore=112.6138;InbreedingCoeff=0.8263;MQ=70.12;MQ0=10;MQRankSum=-4.322;QD=28.58;ReadPosRankSum=1.853;VQSLOD=4.6296;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:45.02:620,45,0	1/1:5,0:5:15.02:207,15,0	0/0:38,0:13:20.83:0,21,294	0/0:35,0:20:35.98:0,36,539	1/1:24,0:24:48.11:658,48,0	1/1:19,0:19:57.18:912,57,0	1/1:18,0:18:51.15:806,51,0	1/1:1,9:11:33.11:512,33,0	1/1:18,0:18:44.75:576,45,0	1/1:27,0:28:74.72:973,75,0	1/1:25,0:25:14.92:137,15,0	1/1:11,0:11:21.02:317,21,0	1/1:14,0:14:33.09:486,33,0	1/1:13,0:13:27.05:370,27,0	1/1:14,0:14:35.94:417,36,0	1/1:28,0:28:71.85:1075,72,0	1/1:21,0:21:9.01:93,9,0	1/1:7,0:7:21.07:327,21,0	1/1:23,0:23:57.15:817,57,0	1/1:22,0:22:51.05:704,51,0	1/1:16,0:16:2.98:25,3,0	1/1:12,0:12:23.50:272,24,0	1/1:18,0:18:35.93:550,36,0	1/1:25,0:24:5.71:56,6,0	1/1:14,0:14:32.85:426,33,0	1/1:21,0:21:48.16:716,48,0	1/1:23,0:23:59.80:722,60,0	1/1:9,0:9:27.08:404,27,0
chr10	91406689	.	CA	C	23329.35	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.410;DP=709;FS=0.000;HRun=2;HaplotypeScore=77.4090;InbreedingCoeff=0.9988;MQ=87.99;MQ0=0;MQRankSum=-11.732;QD=35.62;ReadPosRankSum=6.361;VQSLOD=4.7403;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:90.03:1168,90,0	1/1:0,8:8:24.08:311,24,0	0/0:26,0:26:71.90:0,72,1003	0/0:28,0:28:69.24:0,69,1076	1/1:1,28:29:81.23:1034,81,0	1/1:0,30:30:81.26:1052,81,0	1/1:0,21:21:57.19:740,57,0	1/1:1,43:44:99:1662,129,0	1/1:1,25:26:69.22:895,69,0	1/1:0,30:30:90.27:1135,90,0	1/1:1,23:24:69.22:896,69,0	1/1:0,14:14:36.12:467,36,0	1/1:0,17:17:48.02:623,48,0	1/1:0,19:19:48.16:623,48,0	1/1:0,30:30:75.24:974,75,0	1/1:0,21:21:57.19:740,57,0	1/1:1,33:34:87.28:1130,87,0	1/1:3,14:17:42.14:545,42,0	1/1:1,20:21:60.19:764,60,0	1/1:0,23:23:63.20:818,63,0	1/1:0,25:25:69.22:896,69,0	1/1:0,34:34:96.31:1247,96,0	1/1:0,24:24:69.22:896,69,0	1/1:1,35:36:93.25:1208,93,0	1/1:0,15:15:42.14:545,42,0	1/1:0,34:34:99:1325,102,0	1/1:0,28:28:81.26:1051,81,0	1/1:0,16:16:45.15:584,45,0
chr10	91407430	.	C	CTTTGT	8096.94	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=3.819;DP=662;FS=2.126;HRun=0;HaplotypeScore=272.4057;InbreedingCoeff=0.9023;MQ=68.20;MQ0=4;MQRankSum=-6.075;QD=22.74;ReadPosRankSum=-5.875;VQSLOD=2.8848;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:23,8:31:34.36:869,34,0	1/1:2,1:3:5.98:104,6,0	0/0:25,0:19:3.01:0,3,45	0/0:36,0:27:5.39:0,5,83	1/1:14,0:15:5.98:85,6,0	0/0:27,0:27:42.14:0,42,764	0/0:31,0:30:39.12:0,39,680	1/1:35,0:34:24.07:475,24,0	1/1:20,0:22:18.06:383,18,0	0/0:24,0:24:35.99:0,36,614	0/0:16,0:15:24.08:0,24,428	1/1:23,0:27:33.10:649,33,0	0/0:17,0:17:30.10:0,30,546	1/1:23,0:29:36.09:694,36,0	1/1:18,14:32:60.17:1611,60,0	0/0:35,0:35:54.17:0,54,939	1/1:18,4:22:25.30:548,25,0	0/0:15,0:15:18.06:0,18,321	1/1:29,0:30:24.07:482,24,0	1/1:22,0:25:33.10:653,33,0	1/1:19,0:19:7.72:83,8,0	0/0:22,0:22:48.16:0,48,874	0/0:15,0:15:24.07:0,24,406	0/0:23,0:23:27.09:0,27,491	0/0:20,0:20:36.12:0,36,655	1/1:21,0:25:36.12:784,36,0	1/1:27,0:30:27.06:551,27,0	1/1:9,0:9:6.02:126,6,0
chr10	91407673	.	CT	C	4270.31	PASS	AB=0.991;AC=43;AF=0.768;AN=56;BaseQRankSum=-3.394;DP=403;FS=0.683;HRun=8;HaplotypeScore=63.2217;InbreedingCoeff=0.4004;MQ=80.89;MQ0=4;MQRankSum=-3.765;QD=12.82;ReadPosRankSum=6.545;VQSLOD=3.7256;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:31:75.07:712,75,0	1/1:0,5:5:15.02:145,15,0	0/0:34,0:21:13.85:0,14,197	0/1:20,0:16:21.21:21,0,117	0/0:13,0:13:11.71:0,12,53	1/1:2,12:14:32.95:305,33,0	1/1:3,8:10:18.02:174,18,0	0/1:20,0:20:8.20:8,0,72	1/1:12,0:12:10.21:31,10,0	1/1:1,13:14:33.02:310,33,0	1/1:0,8:8:14.89:123,15,0	0/1:12,0:12:4.75:27,0,5	1/1:5,10:15:19.43:220,19,0	1/1:10,0:10:2.01:13,2,0	1/1:2,12:14:33:309,33,0	1/1:0,13:13:30.05:289,30,0	1/1:2,20:23:54.06:512,54,0	1/1:3,16:18:30.05:289,30,0	0/0:16,0:15:0.70:0,1,70	0/1:13,0:13:2.49:2,0,30	1/1:10,0:10:4.72:13,5,0	1/1:1,7:8:20.98:193,21,0	1/1:1,4:5:9.01:87,9,0	1/1:2,7:9:15.02:145,15,0	1/1:3,10:13:30.04:290,30,0	0/1:17,0:17:25.64:26,0,32	1/1:16,0:16:8.59:27,9,0	0/0:7,0:7:3.78:0,4,28
chr10	91407681	.	TA	T	3028.45	PASS	AB=0.917;AC=41;AF=0.732;AN=56;BaseQRankSum=-3.376;DP=392;FS=25.887;HRun=10;HaplotypeScore=66.2286;InbreedingCoeff=0.0994;MQ=79.68;MQ0=6;MQRankSum=-1.490;QD=8.68;ReadPosRankSum=8.338;VQSLOD=-0.2067;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:0.52:113,0,1	0/1:6,0:6:5.37:5,0,16	0/0:32,0:19:24.63:0,25,219	0/1:22,0:17:13.41:13,0,83	1/1:1,13:14:29.98:260,30,0	0/1:14,1:15:13.55:48,0,14	1/1:8,0:7:8.39:25,8,0	1/1:5,16:20:44.87:369,45,0	1/1:0,12:12:29.99:259,30,0	0/1:16,0:16:2.59:3,0,82	0/0:10,0:10:0.65:0,1,35	1/1:1,12:13:35.87:300,36,0	0/1:14,0:14:33.75:34,0,61	0/1:2,8:10:3.35:151,0,3	0/1:13,0:13:7.43:26,0,7	1/1:13,0:13:13.73:44,14,0	1/1:23,0:23:36.17:132,36,0	0/1:17,0:16:0.52:46,0,1	0/1:4,9:12:0.24:178,0,0	1/1:3,6:9:17.99:156,18,0	1/1:1,11:12:24:208,24,0	1/1:7,0:7:7.43:21,7,0	1/1:4,0:4:2.75:7,3,0	0/1:7,0:7:4.87:14,0,5	1/1:11,0:11:8.52:20,9,0	1/1:2,14:16:41.85:350,42,0	1/1:2,13:15:7.69:239,8,0	1/1:1,6:7:18:156,18,0
chr10	91407768	.	C	CGAAAAAAAAA	6337.98	PASS	AB=0.889;AC=43;AF=0.827;AN=52;BaseQRankSum=-2.518;DP=228;FS=1.387;HRun=0;HaplotypeScore=61.6031;InbreedingCoeff=0.1975;MQ=42.03;MQ0=10;MQRankSum=-1.952;QD=30.92;ReadPosRankSum=0.572;VQSLOD=4.0230;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,1:13:24.08:1011,24,0	1/1:6,0:6:9.48:290,9,0	0/0:1,0:1:3.01:0,3,44	0/0:6,0:5:0.86:0,1,81	1/1:3,0:3:3:33,3,0	1/1:9,0:9:14.88:422,15,0	1/1:10,0:9:11.07:499,11,0	1/1:11,0:5:2.93:20,3,0	1/1:8,0:4:8.91:77,9,0	1/1:12,0:8:6.18:528,6,0	0/1:8,0:8:7.05:126,0,7	0/0:4,0:4:0:0,0,0	1/1:7,0:5:11.54:106,12,0	1/1:8,0:5:2.94:18,3,0	0/1:5,5:10:3.96:395,0,4	1/1:6,0:6:9.03:390,9,0	1/1:11,0:10:6.29:514,6,0	1/1:11,0:7:8.92:172,9,0	1/1:13,0:11:23.76:377,24,0	1/1:5,0:4:2.94:19,3,0	./.	./.	1/1:5,0:5:6:230,6,0	1/1:8,0:5:11.96:384,12,0	1/1:10,0:6:1.22:3,1,0	1/1:18,0:15:23.37:450,23,0	0/1:9,0:5:11.02:11,0,12	1/1:3,0:2:6.02:265,6,0
chr10	91407769	.	G	GAAAAAAAAAGA	20936.52	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-0.102;DP=384;FS=1.338;HRun=0;HaplotypeScore=142.5019;InbreedingCoeff=0.3936;MQ=39.55;MQ0=10;MQRankSum=-1.752;QD=54.81;ReadPosRankSum=-1.493;VQSLOD=4.5419;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,11:25:49.94:2210,50,0	1/1:5,3:8:14.32:559,14,0	0/0:2,0:2:2.96:0,3,38	0/1:6,0:5:3.79:4,0,81	1/1:16,0:16:24.96:699,25,0	1/1:11,0:14:28.17:905,28,0	1/1:13,0:15:26.07:1114,26,0	1/1:23,0:16:32.70:1061,33,0	1/1:11,0:7:17.94:386,18,0	1/1:12,5:16:30.21:1323,30,0	1/1:6,0:11:1.98:496,2,0	1/1:10,0:10:18.03:712,18,0	1/1:12,0:10:26.19:525,26,0	1/1:8,0:5:8.96:280,9,0	1/1:14,1:15:9.33:914,9,0	1/1:7,1:13:30.08:1078,30,0	1/1:13,3:16:27.41:1570,27,0	1/1:16,0:12:23.97:700,24,0	1/1:22,0:21:47.80:1369,48,0	1/1:13,0:12:17.99:475,18,0	1/1:6,0:3:3.01:132,3,0	1/1:7,0:4:6.02:177,6,0	1/1:12,0:14:21.06:805,21,0	1/1:8,1:7:14.97:584,15,0	1/1:13,0:10:14.06:486,14,0	1/1:23,0:22:39.04:883,39,0	1/1:19,0:15:13.32:1044,13,0	1/1:4,0:5:14.91:447,15,0
chr10	91408435	.	G	GGT	6321.67	PASS	AB=0.651;AC=19;AF=0.339;AN=56;BaseQRankSum=-2.228;DP=670;FS=5.020;HRun=0;HaplotypeScore=155.2508;InbreedingCoeff=0.8215;MQ=60.42;MQ0=8;MQRankSum=-5.997;QD=26.23;ReadPosRankSum=-1.293;VQSLOD=5.0527;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:91.99:0,92,1201	0/0:4,0:4:9.03:0,9,114	0/0:44,0:36:35.04:0,35,633	0/0:38,0:26:47.50:0,47,513	0/1:7,14:21:0.03:378,0,0	0/0:19,0:19:43.37:0,43,524	0/0:30,0:30:66.15:0,66,775	1/1:14,28:42:63.03:1320,63,0	0/1:7,8:16:2.36:421,0,2	0/0:22,0:22:54.17:0,54,673	0/0:15,0:15:23.99:0,24,305	1/1:6,12:18:34.18:499,34,0	0/0:10,0:10:30.08:0,30,363	1/1:7,17:24:35.15:549,35,0	0/0:22,0:22:48.15:0,48,610	0/0:17,0:17:33.09:0,33,407	0/0:45,0:45:99:0,105,1319	0/0:21,0:19:48.12:0,48,592	0/1:9,5:14:15.24:345,0,15	1/1:6,11:16:25.89:406,26,0	1/1:19,14:34:48.15:764,48,0	0/0:23,0:23:39.02:0,39,496	0/0:17,0:17:45.14:0,45,572	0/0:34,0:34:90.25:0,90,1127	0/0:22,0:22:63.19:0,63,790	1/1:11,15:24:12.02:735,12,0	1/1:5,14:20:39.22:566,39,0	1/1:4,4:8:21.07:340,21,0
chr10	91408451	.	CGT	C	5957.14	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-9.581;DP=702;FS=16.117;HRun=0;HaplotypeScore=162.5663;InbreedingCoeff=0.9519;MQ=55.37;MQ0=10;MQRankSum=8.636;QD=16.92;ReadPosRankSum=9.838;VQSLOD=2.8650;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:45:81.22:401,81,0	1/1:1,0:6:2.74:14,3,0	0/0:36,1:25:24.98:0,25,507	0/0:38,1:24:36.87:0,37,467	0/0:10,0:24:25.22:0,25,160	1/1:6,10:17:7.95:316,8,0	1/1:6,20:28:34.87:622,35,0	0/0:34,0:42:62.95:0,63,640	0/0:9,0:23:32.15:0,32,252	1/1:5,16:20:48.09:564,48,0	1/1:7,8:15:14.96:182,15,0	0/0:5,0:21:34.52:0,35,265	1/1:3,7:11:20.90:232,21,0	0/0:20,0:28:50.96:0,51,470	1/1:4,0:26:42.61:209,43,0	1/1:0,14:14:36.11:437,36,0	1/1:7,0:48:79.54:391,80,0	1/1:6,13:20:12.60:277,13,0	0/0:11,0:19:37.86:0,38,387	0/0:8,0:21:27.90:0,28,167	0/0:23,0:35:17.45:0,17,198	1/1:6,9:16:17.95:218,18,0	1/1:7,11:20:38.78:428,39,0	1/1:2,33:40:95.45:1051,95,0	1/1:6,16:23:51.15:614,51,0	0/0:19,1:28:32.50:0,33,609	0/0:7,0:21:38.21:0,38,293	0/0:6,0:9:11.90:0,12,93
chr10	91409147	.	AGTGTGTGTGTGTGTGTGT	A	14033.58	PASS	AB=0.723;AC=28;AF=0.500;AN=56;BaseQRankSum=1.494;DP=579;FS=6.402;HRun=0;HaplotypeScore=298.5922;InbreedingCoeff=0.7303;MQ=61.91;MQ0=7;MQRankSum=-7.979;QD=47.90;ReadPosRankSum=4.286;VQSLOD=2.6429;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:30:2.11:204,2,0	0/1:6,0:10:6.90:328,0,7	0/0:21,0:17:9.03:0,9,443	0/0:24,0:16:3.01:0,3,198	0/0:17,0:27:35.35:0,35,1084	1/1:14,12:26:27.09:1322,27,0	1/1:10,4:14:12.04:587,12,0	0/0:25,0:23:30.10:0,30,976	0/0:7,0:13:24.08:0,24,686	1/1:7,21:28:57.17:2455,57,0	1/1:9,9:18:18.06:848,18,0	0/0:11,0:24:33.10:0,33,959	1/1:10,8:19:24.08:1153,24,0	0/0:9,0:15:21.06:0,21,611	1/1:5,0:17:30.10:833,30,0	1/1:7,12:19:27.56:1322,28,0	0/1:12,0:19:59.87:318,0,60	1/1:9,2:11:6.02:260,6,0	0/0:27,0:31:33.11:0,33,1033	0/0:14,0:24:42.14:0,42,1328	0/0:20,0:20:6:0,6,310	1/1:9,18:28:45.15:2013,45,0	1/1:10,7:17:6.67:294,7,0	1/1:15,1:16:3.01:147,3,0	1/1:5,14:21:42.14:1949,42,0	0/0:17,0:21:41.26:0,41,1103	0/0:11,0:23:30.10:0,30,758	0/0:11,0:12:9.03:0,9,253
chr10	91409645	.	CGAA	C	6165.26	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=3.150;DP=531;FS=0.755;HRun=0;HaplotypeScore=104.2326;InbreedingCoeff=0.1531;MQ=60.64;MQ0=5;MQRankSum=-2.899;QD=15.93;ReadPosRankSum=5.574;VQSLOD=4.0395;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:44.54:0,45,433	0/0:13,0:13:34.66:0,35,280	0/0:14,0:5:1.38:0,1,58	0/0:28,0:14:18.25:0,18,309	0/1:19,0:19:29.43:144,0,29	1/1:0,9:11:17.49:233,17,0	1/1:6,9:15:22.70:498,23,0	0/1:32,0:32:85.01:195,0,85	0/1:24,0:24:71.87:166,0,72	1/1:0,17:19:52.60:731,53,0	1/1:0,15:15:41.65:488,42,0	0/1:17,0:17:66.01:98,0,66	1/1:0,9:9:20.90:269,21,0	0/1:13,0:13:20.45:20,0,94	0/0:24,0:24:25.47:0,25,284	1/1:0,15:16:32.98:465,33,0	0/0:34,0:33:48.20:0,48,452	1/1:5,5:10:27.35:344,27,0	0/1:24,0:24:46.10:161,0,46	0/1:18,0:18:11.85:144,0,12	0/1:13,0:13:26.13:26,0,84	1/1:0,10:10:23.92:347,24,0	1/1:0,20:22:40.91:585,41,0	1/1:1,18:19:29.88:492,30,0	1/1:0,10:10:24.04:396,24,0	0/1:32,0:32:71.58:186,0,72	0/1:24,0:24:34.46:118,0,34	0/1:13,0:13:48.94:57,0,49
chr10	91409646	.	GAAA	G	6921.10	PASS	AB=0.786;AC=44;AF=0.786;AN=56;BaseQRankSum=-5.774;DP=528;FS=0.955;HRun=15;HaplotypeScore=102.8291;InbreedingCoeff=0.2733;MQ=60.68;MQ0=5;MQRankSum=-1.531;QD=14.60;ReadPosRankSum=0.798;VQSLOD=3.6855;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,2:29:35.86:36,0,43	0/0:5,0:13:11.73:0,12,75	0/0:13,0:4:0:0,0,0	0/0:27,0:14:18.01:0,18,226	1/1:1,18:19:38.90:437,39,0	0/1:11,0:11:4.70:92,0,5	0/1:16,0:15:11.26:203,0,11	1/1:6,23:32:67.28:697,67,0	1/1:6,18:24:38.92:437,39,0	1/1:19,0:19:8.55:283,9,0	1/1:15,0:15:4.35:183,4,0	1/1:5,10:17:25.42:300,25,0	1/1:9,0:9:11.86:114,12,0	1/1:5,8:13:14.97:168,15,0	0/1:7,1:24:8.10:28,0,8	1/1:16,0:16:23.86:223,24,0	0/1:8,3:33:17.50:71,0,17	0/1:10,0:10:9.18:125,0,9	1/1:7,16:24:49.54:558,50,0	1/1:2,16:18:38.94:437,39,0	1/1:3,8:13:17.86:186,18,0	1/1:10,0:10:17.96:180,18,0	1/1:22,0:22:27.99:283,28,0	1/1:20,0:19:21.64:253,22,0	1/1:10,0:10:20.97:195,21,0	1/1:7,23:32:70.23:787,70,0	1/1:4,16:23:41.82:423,42,0	1/1:4,8:13:20.94:220,21,0
chr10	91409814	.	TTCC	T	5639.58	PASS	AB=0.981;AC=24;AF=0.429;AN=56;BaseQRankSum=12.422;DP=614;FS=13.224;HRun=0;HaplotypeScore=114.4104;InbreedingCoeff=0.8749;MQ=57.99;MQ0=5;MQRankSum=-10.117;QD=23.02;ReadPosRankSum=1.589;VQSLOD=4.2405;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,120,2169	0/0:9,0:9:21.06:0,21,370	0/0:22,0:12:18.68:0,19,310	0/1:18,0:6:3.26:3,0,28	0/0:28,0:28:54.09:0,54,912	1/1:20,0:19:39.12:513,39,0	1/1:27,1:28:69.11:838,69,0	0/0:26,0:25:42.05:0,42,620	0/0:33,0:33:93.25:0,93,1819	1/1:18,1:19:50.20:667,50,0	1/1:6,0:6:15.05:197,15,0	0/0:23,0:23:60.19:0,60,1153	1/1:11,2:13:32.90:420,33,0	0/0:17,0:17:45.14:0,45,856	0/0:25,0:25:63.22:0,63,1284	1/1:20,1:21:51.15:684,51,0	0/0:27,0:27:72.25:0,72,1443	1/1:14,0:14:13.03:337,13,0	0/0:26,0:26:45.12:0,45,760	0/0:23,0:23:42.04:0,42,681	0/0:36,0:36:78.25:0,78,1521	1/1:21,0:21:38.85:483,39,0	1/1:17,0:17:36.03:446,36,0	1/1:20,1:21:27.03:337,27,0	1/1:21,0:21:56:703,56,0	0/1:25,1:26:10.87:11,0,1112	0/0:17,0:17:51.16:0,51,965	0/0:10,0:10:27.09:0,27,519
chr10	91409833	.	TTCTC	T	3496.16	PASS	AB=0.837;AC=21;AF=0.375;AN=56;BaseQRankSum=15.588;DP=662;FS=5.174;HRun=0;HaplotypeScore=146.9531;InbreedingCoeff=0.7161;MQ=56.08;MQ0=10;MQRankSum=-10.713;QD=13.34;ReadPosRankSum=4.681;VQSLOD=3.0420;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,3385	0/0:9,0:9:27.09:0,27,629	0/1:33,0:11:7.82:8,0,557	0/0:31,0:12:22.83:0,23,310	0/0:19,0:19:50.73:0,51,1240	1/1:11,11:21:18.56:394,19,0	1/1:18,13:31:0.40:421,0,0	0/0:26,0:25:57.19:0,57,1249	0/0:37,0:37:99:0,111,2969	1/1:16,13:27:23.62:468,24,0	0/1:4,5:9:3.63:93,0,4	0/0:25,0:25:75.26:0,75,1959	1/1:9,7:16:10.16:263,10,0	0/0:21,0:21:63.22:0,63,1605	0/0:24,0:24:72.25:0,72,2049	1/1:8,12:20:28.40:490,28,0	0/0:27,0:27:81.26:0,81,2093	0/1:11,2:13:15.57:98,0,16	0/0:25,0:25:59.53:0,60,1428	0/0:16,0:16:39.09:0,39,835	0/0:35,0:35:99:0,99,2578	1/1:9,11:20:39.10:437,39,0	1/1:14,10:24:15.85:293,16,0	1/1:16,7:23:13.57:221,14,0	1/1:10,12:22:0.58:310,1,0	0/0:25,1:26:40.83:0,41,1890	0/0:22,0:22:66.23:0,66,1700	0/0:9,0:9:27.06:0,27,614
chr10	91409834	.	TCTC	T	5460.99	PASS	AB=0.765;AC=21;AF=0.375;AN=56;BaseQRankSum=13.997;DP=657;FS=5.818;HRun=0;HaplotypeScore=128.4759;InbreedingCoeff=0.9301;MQ=56.86;MQ0=10;MQRankSum=-11.044;QD=24.16;ReadPosRankSum=1.657;VQSLOD=4.8286;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,112,2109	0/0:10,0:10:24.07:0,24,424	0/0:34,0:11:20.55:0,21,341	0/0:29,0:13:20.10:0,20,214	0/0:19,0:19:39.13:0,39,784	1/1:14,8:21:42.14:568,42,0	1/1:18,11:29:38.14:528,38,0	0/0:26,0:25:45.15:0,45,820	0/0:36,0:36:99:0,108,2112	1/1:17,12:27:66.19:893,66,0	1/1:6,3:9:9.03:122,9,0	0/0:25,0:25:69.24:0,69,1350	1/1:11,5:16:27.09:374,27,0	0/0:21,0:21:57.19:0,57,1100	0/0:24,0:24:72.25:0,72,1485	1/1:16,4:20:48.14:645,48,0	0/0:27,0:27:69.22:0,69,1369	0/1:9,4:13:5.06:161,0,5	0/0:24,0:24:51.07:0,51,940	0/0:16,0:16:24.05:0,24,448	0/0:35,0:35:90.31:0,90,1771	1/1:12,8:20:45.06:572,45,0	1/1:13,11:24:29.95:410,30,0	1/1:19,3:22:44.37:576,44,0	1/1:22,0:22:45.14:612,45,0	0/0:26,0:26:27.10:0,27,1284	0/0:22,0:22:60.21:0,60,1156	0/0:7,0:7:18.06:0,18,377
chr10	91412914	.	T	TG	4851.22	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=-6.943;DP=378;FS=4.730;HRun=0;HaplotypeScore=54.7030;InbreedingCoeff=0.7110;MQ=58.39;MQ0=3;MQRankSum=0.950;QD=19.96;ReadPosRankSum=3.811;VQSLOD=6.9391;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:33:32.02:32,0,157	0/0:3,0:3:5.24:0,5,45	0/0:23,0:13:25.15:0,25,202	0/1:10,0:8:0.39:0,0,37	1/1:4,7:11:26.48:322,26,0	0/0:17,0:17:44.92:0,45,527	0/0:13,0:13:38.95:0,39,437	1/1:2,20:23:60.88:725,61,0	1/1:0,21:22:60.12:751,60,0	0/0:8,0:8:20.80:0,21,241	0/0:8,0:8:20.32:0,20,259	1/1:5,8:13:18.96:294,19,0	0/0:8,0:8:23.95:0,24,249	1/1:0,17:19:42.11:527,42,0	0/1:17,0:17:15.94:16,0,179	0/0:7,0:7:18.05:0,18,224	0/1:24,0:24:17.43:17,0,155	0/0:8,0:8:20.97:0,21,245	1/1:1,11:14:38.81:423,39,0	1/1:1,11:13:27.18:363,27,0	1/1:0,17:17:39.09:507,39,0	0/0:11,0:11:33.05:0,33,418	0/0:2,0:2:5.99:0,6,63	0/0:14,0:14:38.92:0,39,447	0/0:13,0:13:36:0,36,425	1/1:0,12:12:36.08:437,36,0	1/1:1,8:9:18.05:237,18,0	1/1:0,5:5:15.05:199,15,0
chr10	91413307	.	CAAAAT	C	7606.55	PASS	AC=46;AF=0.920;AN=50;BaseQRankSum=-1.911;DP=398;FS=0.000;HRun=0;HaplotypeScore=81.3279;InbreedingCoeff=0.4570;MQ=69.74;MQ0=0;MQRankSum=1.589;QD=22.50;ReadPosRankSum=1.839;VQSLOD=4.3493;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,20:26:36.12:648,36,0	1/1:3,5:8:12.04:203,12,0	0/0:16,0:12:5.99:0,6,51	0/0:27,0:11:3.01:0,3,84	1/1:6,4:10:8.96:129,9,0	1/1:5,18:23:36.12:667,36,0	1/1:5,1:6:3.01:56,3,0	1/1:15,16:31:48.11:712,48,0	1/1:3,7:10:12.04:222,12,0	1/1:6,6:12:18.06:332,18,0	1/1:6,2:8:6.02:93,6,0	1/1:7,1:8:3.01:56,3,0	1/1:4,1:5:3.01:55,3,0	1/1:4,4:8:6.02:111,6,0	1/1:6,4:10:12.04:222,12,0	1/1:8,4:12:6.02:111,6,0	1/1:14,25:39:51.17:945,51,0	1/1:8,12:20:24.08:445,24,0	1/1:5,7:12:21.07:369,21,0	1/1:6,6:12:18.06:317,18,0	1/1:4,4:8:9.03:167,9,0	./.	./.	./.	1/1:7,10:17:24.08:427,24,0	1/1:9,3:12:9.03:156,9,0	1/1:10,7:17:15.05:278,15,0	1/1:5,19:24:43.62:883,44,0
chr10	91413493	.	TTCTTTCTC	T	6281.53	PASS	AB=0.965;AC=35;AF=0.625;AN=56;BaseQRankSum=-7.868;DP=404;FS=3.168;HRun=0;HaplotypeScore=117.0771;InbreedingCoeff=0.0330;MQ=56.88;MQ0=1;MQRankSum=-1.504;QD=17.74;ReadPosRankSum=0.027;VQSLOD=3.7923;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:30.82:0,31,147	0/1:5,0:5:50.18:66,0,50	0/0:6,0:6:17.85:0,18,155	0/0:6,0:4:11.99:0,12,115	0/1:14,0:14:95.85:96,0,574	1/1:1,16:17:24.01:506,24,0	0/1:3,14:17:1.56:110,0,2	1/1:31,0:31:47.03:579,47,0	0/0:14,0:14:11.19:0,11,53	1/1:5,5:10:13.54:427,14,0	1/1:4,1:5:11.95:177,12,0	0/1:8,0:8:80.90:81,0,254	1/1:5,7:12:36.03:707,36,0	0/1:10,0:10:5.12:5,0,567	0/1:10,0:10:29.91:30,0,491	1/1:7,3:10:24.04:379,24,0	0/1:20,0:20:99:203,0,708	1/1:9,1:10:24.02:292,24,0	0/1:26,0:26:99:237,0,681	0/1:19,0:19:96.85:97,0,940	0/1:19,0:19:99:152,0,649	1/1:3,3:6:17.98:260,18,0	1/1:5,2:7:18.04:327,18,0	1/1:12,4:16:29.97:386,30,0	1/1:2,16:18:24.04:589,24,0	0/1:16,0:16:99:152,0,551	0/1:16,0:16:64.84:65,0,808	0/1:32,0:32:99:360,0,629
chr10	91413497	.	TTCTC	T	6381.64	PASS	AB=0.990;AC=41;AF=0.732;AN=56;BaseQRankSum=-4.743;DP=403;FS=6.706;HRun=0;HaplotypeScore=91.2544;InbreedingCoeff=-0.0227;MQ=56.11;MQ0=1;MQRankSum=-1.294;QD=16.32;ReadPosRankSum=-2.848;VQSLOD=3.4424;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:33.58:626,34,0	1/1:5,0:5:15.01:135,15,0	0/0:6,0:6:17.85:0,18,155	0/0:6,0:4:11.99:0,12,115	0/1:13,0:13:99:120,0,221	1/1:16,1:17:23.67:230,24,0	1/1:16,0:16:11.95:132,12,0	1/1:29,0:29:79.09:684,79,0	1/1:0,14:14:12.04:227,12,0	1/1:11,1:12:33.01:355,33,0	1/1:6,0:6:13.18:110,13,0	0/1:9,0:9:74.66:133,0,75	1/1:13,0:13:38.95:382,39,0	0/1:10,0:10:37.11:37,0,225	0/1:8,0:8:33.49:33,0,169	1/1:10,0:10:27.01:262,27,0	0/1:22,1:23:99:300,0,258	1/1:10,0:10:27.01:248,27,0	0/1:22,1:23:99:293,0,303	0/1:19,0:19:99:148,0,399	0/1:18,0:18:99:148,0,238	1/1:6,0:6:17.98:168,18,0	1/1:8,0:8:23.97:240,24,0	1/1:18,0:18:30.84:272,31,0	1/1:17,0:17:24.03:266,24,0	0/1:15,0:15:99:184,0,172	0/1:16,0:16:88.83:89,0,380	0/1:31,1:32:99:558,0,218
chr10	91413557	.	ATATCTATCTATC	A	2752.43	PASS	AB=0.909;AC=20;AF=0.400;AN=50;BaseQRankSum=0.648;DP=480;FS=17.520;HRun=0;HaplotypeScore=185.8699;InbreedingCoeff=0.4838;MQ=54.25;MQ0=9;MQRankSum=-7.550;QD=13.90;ReadPosRankSum=-2.626;VQSLOD=0.7098;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:5.51:0,6,87	1/1:8,0:8:15.05:443,15,0	./.	./.	0/0:12,0:16:12.02:0,12,295	0/1:18,1:21:32.73:138,0,33	0/0:12,0:12:3:0,3,25	0/0:27,0:27:0.47:0,0,1	0/0:23,0:23:45.15:0,45,2228	1/1:12,14:26:36.06:864,36,0	1/1:3,6:9:3.01:101,3,0	0/0:11,0:12:12.03:0,12,273	1/1:13,7:20:6.02:202,6,0	0/0:9,0:15:21.06:0,21,465	0/1:13,0:13:1.76:10,0,2	1/1:7,4:11:3.01:101,3,0	0/0:14,0:14:0.47:0,0,1	1/1:8,7:15:3.01:93,3,0	0/1:17,0:17:20.11:20,0,90	0/0:12,0:21:12.03:0,12,254	0/0:8,0:12:12.04:0,12,299	1/1:8,9:17:17.65:338,18,0	1/1:7,7:14:12.04:320,12,0	./.	0/1:20,2:26:24.03:290,0,24	0/0:14,0:24:26.46:0,26,599	0/0:11,0:17:18.05:0,18,401	0/0:11,0:21:24.08:0,24,544
chr10	91413609	.	CTA	C	241.54	PASS	AB=0.801;AC=4;AF=0.071;AN=56;BaseQRankSum=10.659;DP=480;FS=0.000;HRun=0;HaplotypeScore=107.5951;InbreedingCoeff=-0.0963;MQ=53.96;MQ0=11;MQRankSum=-4.662;QD=4.09;ReadPosRankSum=5.201;VQSLOD=1.6744;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:22.04:0,22,420	0/1:3,5:8:70.47:127,0,70	0/0:16,0:6:17.89:0,18,215	0/0:9,0:5:14.90:0,15,156	0/0:20,0:20:27.09:0,27,383	0/0:13,0:13:5.51:0,6,232	0/0:15,0:15:37.94:0,38,511	0/0:26,0:22:66.22:0,66,943	0/0:20,0:20:57.67:0,58,1011	0/1:27,0:27:13.63:14,0,614	0/0:11,0:11:10.15:0,10,207	0/0:12,0:12:28.76:0,29,359	0/0:21,0:21:26.79:0,27,453	0/0:17,0:17:28.47:0,28,427	0/1:6,6:12:99:194,0,180	0/0:15,0:15:22.16:0,22,343	0/1:11,1:12:12.28:12,0,395	0/0:19,0:19:33.55:0,34,436	0/0:21,0:19:43.61:0,44,600	0/0:15,0:15:6.38:0,6,123	0/0:10,0:10:10.45:0,10,204	0/0:16,0:16:12.96:0,13,312	0/0:14,0:13:3.20:0,3,271	0/0:21,0:20:35.99:0,36,513	0/0:17,0:17:29.95:0,30,437	0/0:24,0:23:30.96:0,31,543	0/0:26,0:25:52.62:0,53,768	0/0:25,0:25:33.64:0,34,545
chr10	91413615	.	ATCTATCTATC	A	1160.71	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=10.548;DP=489;FS=5.312;HRun=0;HaplotypeScore=172.9355;InbreedingCoeff=0.0333;MQ=56.31;MQ0=10;MQRankSum=-5.199;QD=5.86;ReadPosRankSum=2.878;VQSLOD=2.4547;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:9.89:10,0,64	1/1:4,5:9:11.67:396,12,0	0/0:19,0:9:27.09:0,27,408	0/0:12,0:8:24.08:0,24,356	0/0:21,0:21:17.90:0,18,432	0/1:11,0:11:64.99:65,0,161	0/0:14,0:14:18.31:0,18,450	0/0:29,0:26:78.09:0,78,1129	0/0:20,0:20:57.20:0,57,2051	0/1:26,0:26:99:296,0,547	0/1:11,0:11:37.31:37,0,210	0/0:12,0:12:33.11:0,33,585	0/1:18,0:18:74.11:74,0,396	0/0:17,0:17:42.14:0,42,709	1/1:12,0:12:10.75:95,11,0	0/1:13,0:13:28.26:28,0,338	0/1:12,0:12:3.62:34,0,4	0/1:20,0:20:4.82:5,0,550	0/0:23,0:21:29.93:0,30,667	0/0:15,0:15:15.05:0,15,270	0/0:10,0:10:27.09:0,27,467	0/1:15,0:15:70.78:71,0,178	0/1:14,0:13:99:108,0,244	0/0:21,0:20:40:0,40,559	0/1:16,0:16:99:105,0,233	0/0:25,0:24:37.50:0,37,1042	0/0:28,0:27:78.26:0,78,1254	0/0:25,0:25:54.18:0,54,1085
chr10	91413939	.	ATACATATG	A	5831.68	PASS	AB=0.858;AC=19;AF=0.352;AN=54;BaseQRankSum=10.376;DP=658;FS=3.621;HRun=0;HaplotypeScore=183.3744;InbreedingCoeff=0.6705;MQ=54.11;MQ0=12;MQRankSum=-3.213;QD=23.42;ReadPosRankSum=-2.655;VQSLOD=4.2365;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,2797	0/0:10,0:10:24.08:0,24,838	./.	0/0:14,0:2:3.01:0,3,51	1/1:16,12:28:35.18:702,35,0	0/0:35,0:35:99:0,99,3227	0/0:20,0:20:54.19:0,54,1794	0/1:36,0:34:99:363,0,291	1/1:14,4:18:35.19:811,35,0	0/0:46,0:45:99:0,120,3931	0/0:20,0:20:54.19:0,54,1902	1/1:14,3:17:36.12:625,36,0	0/0:15,0:15:45.15:0,45,1510	1/1:11,4:15:9.25:400,9,0	0/0:31,0:31:78.27:0,78,2420	0/0:25,0:25:75.24:0,75,2222	0/0:16,0:16:33.09:0,33,982	0/0:20,0:20:57.15:0,57,1843	0/1:11,8:16:99:609,0,118	1/1:8,23:31:21.07:414,21,0	1/1:12,1:13:5.09:127,5,0	0/0:28,0:28:66.21:0,66,1848	0/0:25,0:25:60.21:0,60,1845	0/0:17,0:17:39.13:0,39,1067	0/0:37,0:37:96.33:0,96,3293	0/1:23,4:27:99:916,0,221	1/1:8,23:31:35.85:830,36,0	1/1:5,9:14:3.01:36,3,0
chr10	91413947	.	G	GTACA	4658.19	PASS	AB=0.753;AC=16;AF=0.296;AN=54;BaseQRankSum=-7.584;DP=631;FS=0.475;HRun=0;HaplotypeScore=133.4590;InbreedingCoeff=0.5544;MQ=54.50;MQ0=11;MQRankSum=0.324;QD=21.17;ReadPosRankSum=-7.323;VQSLOD=2.7928;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:60.20:0,60,964	0/0:11,0:11:21.07:0,21,342	0/0:11,0:1:3.01:0,3,43	0/0:16,0:4:6.02:0,6,91	1/1:19,8:27:21.95:619,22,0	0/0:34,0:34:66.23:0,66,1070	0/0:20,0:20:45.11:0,45,652	1/1:17,8:27:42.08:737,42,0	1/1:12,9:21:6.90:592,7,0	0/0:44,0:43:84.28:0,84,1333	0/0:21,0:21:45.15:0,45,731	0/1:10,6:16:35.04:475,0,35	0/0:16,0:16:39.13:0,39,635	0/1:5,9:14:3.61:272,0,4	0/0:27,0:27:63.21:0,63,1013	0/0:25,0:25:48.16:0,48,775	0/0:14,0:14:18.07:0,18,382	0/0:20,0:20:42.10:0,42,644	0/1:19,1:17:7.27:199,0,7	1/1:25,4:29:5.24:339,5,0	1/1:6,5:12:6.02:146,6,0	0/0:21,0:21:33.11:0,33,537	0/0:28,0:28:51.16:0,51,801	0/0:17,0:17:27.09:0,27,421	0/0:36,0:36:84.26:0,84,1334	0/1:16,10:26:15.15:879,0,15	1/1:23,3:26:2.53:401,3,0	./.
chr10	91414084	.	CTTCCAGCCTCTAG	C	12759.23	PASS	AB=0.766;AC=20;AF=0.370;AN=54;BaseQRankSum=15.530;DP=530;FS=7.862;HRun=0;HaplotypeScore=198.0542;InbreedingCoeff=0.8274;MQ=73.43;MQ0=0;MQRankSum=-13.106;QD=55.96;ReadPosRankSum=-0.552;VQSLOD=3.6024;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.25:0,84,5084	0/0:9,0:9:27.09:0,27,1651	0/0:23,0:23:57.19:0,57,2904	0/0:13,0:13:27.09:0,27,1379	1/1:2,13:15:15.05:366,15,0	0/0:32,0:31:90.31:0,90,5772	0/0:24,0:24:69.24:0,69,4508	1/1:10,11:21:33.09:1120,33,0	1/1:2,24:26:45.15:1681,45,0	0/0:22,0:22:60.20:0,60,3437	0/0:14,0:14:36.10:0,36,2042	1/1:1,10:11:21.07:769,21,0	0/0:19,0:19:48.16:0,48,3078	1/1:3,13:16:24.08:808,24,0	0/0:26,0:26:75.24:0,75,4544	0/1:29,1:30:28.52:29,0,5437	0/0:25,0:25:72.25:0,72,4514	0/0:16,0:16:48.16:0,48,2868	1/1:5,11:16:33.10:1149,33,0	1/1:5,23:28:66.18:1970,66,0	./.	0/0:8,0:8:21.07:0,21,1379	0/0:11,0:11:30.10:0,30,1740	0/0:15,0:15:45.15:0,45,2805	0/0:11,0:11:30.09:0,30,1716	0/1:6,20:26:99:2120,0,328	1/1:9,26:34:66.23:2456,66,0	1/1:0,4:4:9.03:293,9,0
chr10	91414384	.	TAA	T	16644.29	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=11.588;DP=621;FS=3.620;HRun=5;HaplotypeScore=80.9287;InbreedingCoeff=0.9988;MQ=88.32;MQ0=0;MQRankSum=-5.357;QD=35.79;ReadPosRankSum=4.220;VQSLOD=4.4245;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,2028	0/0:12,0:12:36.12:0,36,655	0/0:27,0:27:66.22:0,66,1189	0/0:24,0:24:72.10:0,72,1142	1/1:0,18:18:48.16:671,48,0	1/1:0,24:24:60.20:840,60,0	1/1:2,24:26:66.22:918,66,0	1/1:0,22:22:63.21:881,63,0	1/1:0,21:21:57.19:798,57,0	1/1:1,29:30:87.29:1214,87,0	1/1:0,20:20:45.15:630,45,0	1/1:2,18:20:54.18:751,54,0	1/1:0,10:10:27.09:378,27,0	1/1:1,15:16:33.11:462,33,0	0/0:24,0:24:63.20:0,63,1094	1/1:2,19:21:54.18:756,54,0	0/0:29,0:29:81.28:0,81,1478	1/1:2,15:17:39.13:546,39,0	1/1:1,21:22:63.21:882,63,0	1/1:0,20:20:54.18:755,54,0	1/1:1,39:40:99:1469,105,0	1/1:1,27:28:63.21:882,63,0	1/1:2,25:27:60.05:839,60,0	1/1:1,19:20:45.15:630,45,0	1/1:0,11:11:30.10:420,30,0	1/1:2,25:27:75.12:1002,75,0	1/1:0,18:18:45.15:629,45,0	1/1:0,7:7:21.07:294,21,0
chr10	91414807	.	CACAAAA	C	4107.97	PASS	AB=0.978;AC=23;AF=0.411;AN=56;BaseQRankSum=-4.535;DP=614;FS=0.000;HRun=0;HaplotypeScore=148.8779;InbreedingCoeff=0.3692;MQ=59.25;MQ0=28;MQRankSum=-4.005;QD=12.56;ReadPosRankSum=6.348;VQSLOD=2.4693;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,1:17:67.21:195,0,67	1/1:9,3:11:27.07:458,27,0	0/0:37,0:13:36.03:0,36,624	0/0:40,0:12:27.23:0,27,497	0/0:36,0:35:69.60:0,70,1578	1/1:13,1:13:18.98:355,19,0	0/1:24,1:24:2.84:72,0,3	0/0:24,0:24:72.25:0,72,1275	0/0:15,0:14:42.14:0,42,835	0/1:25,0:25:3.45:791,0,3	0/1:24,0:24:99:642,0,181	0/0:5,0:18:17.99:0,18,307	1/1:15,1:16:9.18:91,9,0	0/1:2,0:15:17.52:18,0,55	1/1:2,14:16:21.07:473,21,0	0/1:33,1:34:10.70:99,0,11	1/1:5,21:26:11.92:216,12,0	1/1:18,1:17:9.10:398,9,0	0/0:16,0:16:40.35:0,40,700	0/0:15,0:16:16.18:0,16,597	0/0:22,0:19:45.62:0,46,765	0/1:17,0:17:4.69:43,0,5	1/1:2,19:21:8.50:154,9,0	0/1:31,0:29:10.62:26,0,11	0/1:10,1:11:32.21:79,0,32	0/0:22,0:15:40.36:0,40,618	0/0:21,0:19:55.39:0,55,910	0/0:17,0:16:4.42:0,4,834
chr10	91414809	.	CAAAA	C	5784.82	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-7.034;DP=619;FS=0.850;HRun=8;HaplotypeScore=130.9928;InbreedingCoeff=0.9396;MQ=60.96;MQ0=27;MQRankSum=-0.315;QD=18.84;ReadPosRankSum=7.404;VQSLOD=0.7900;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:16:20.79:298,21,0	1/1:12,0:11:27.09:383,27,0	0/0:36,0:13:36.03:0,36,624	0/0:40,0:14:22.95:0,23,488	0/0:38,0:37:99:0,101,1715	1/1:14,1:14:29.61:465,30,0	1/1:7,18:24:14.53:215,15,0	0/0:26,0:25:75.26:0,75,1315	0/0:15,0:14:42.14:0,42,817	1/1:26,0:26:66.54:1018,67,0	1/1:24,0:25:27.68:828,28,0	0/0:19,0:19:20.19:0,20,309	1/1:1,14:15:11.61:193,12,0	0/0:15,0:15:4.57:0,5,62	1/1:16,0:16:21.07:281,21,0	1/1:5,27:32:20.43:613,20,0	1/1:26,0:26:11.92:147,12,0	1/1:16,2:16:38.95:558,39,0	0/0:19,0:19:51.45:0,51,888	0/0:15,0:14:36.53:0,37,575	0/0:21,0:18:45.15:0,45,830	1/1:2,15:17:18.03:312,18,0	1/1:20,1:21:11.82:176,12,0	1/1:6,23:27:4.91:102,5,0	1/1:3,7:10:12.04:196,12,0	0/0:23,0:16:43.94:0,44,684	0/0:25,0:22:63.60:0,64,1007	0/0:20,0:19:52.72:0,53,992
chr10	91415461	.	ATGTGTGTGTG	A	2260.28	PASS	AB=0.813;AC=18;AF=0.346;AN=52;BaseQRankSum=4.008;DP=455;FS=0.800;HRun=0;HaplotypeScore=133.0562;InbreedingCoeff=0.6351;MQ=56.44;MQ0=11;MQRankSum=-4.697;QD=15.70;ReadPosRankSum=0.459;VQSLOD=2.2783;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:32.80:0,33,1465	0/0:2,0:2:6.02:0,6,198	./.	./.	0/0:12,0:15:10.21:0,10,268	1/1:10,11:21:18.06:532,18,0	0/1:3,3:6:37.99:83,0,38	0/0:18,0:18:12.04:0,12,306	0/0:6,0:12:10.75:0,11,408	1/1:10,5:15:6.66:201,7,0	1/1:6,8:14:14.96:276,15,0	0/0:17,0:15:30.57:0,31,1230	1/1:5,6:11:12.04:358,12,0	0/0:12,0:15:21:0,21,663	0/0:18,0:18:29.94:0,30,1191	1/1:7,7:14:15.05:447,15,0	0/0:20,0:20:42.14:0,42,1740	0/1:23,1:22:55.99:184,0,56	0/0:8,0:11:12.04:0,12,355	0/0:11,0:15:14.98:0,15,331	0/0:22,0:22:14.34:0,14,453	1/1:5,4:9:6.02:179,6,0	1/1:11,7:18:2.82:89,3,0	0/0:16,1:17:0.89:0,1,2	1/1:6,6:12:3.01:89,3,0	0/0:21,0:27:42.14:0,42,1534	0/0:9,0:15:12.44:0,12,411	0/0:7,0:12:6.02:0,6,229
chr10	91417056	.	G	GACC	182.55	PASS	AC=4;AF=0.083;AN=48;BaseQRankSum=-3.740;DP=144;FS=0.000;HRun=0;HaplotypeScore=30.8257;InbreedingCoeff=0.3842;MQ=95.20;MQ0=1;MQRankSum=-3.546;QD=14.04;ReadPosRankSum=0.155;VQSLOD=2.8712;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,5:9:12.04:225,12,0	./.	0/0:18,0:10:24.63:0,25,302	0/0:18,0:11:21.06:0,21,270	0/0:2,0:3:3.01:0,3,47	0/0:4,0:4:12.04:0,12,190	0/0:4,0:4:6.02:0,6,98	0/0:17,0:17:38.99:0,39,481	0/0:6,0:6:12.03:0,12,165	0/0:4,0:4:6.02:0,6,94	0/0:3,0:2:6.02:0,6,96	0/0:1,0:1:3:0,3,27	0/0:3,0:3:9.01:0,9,122	0/0:8,0:8:21.05:0,21,268	./.	./.	1/1:1,3:4:3.01:56,3,0	0/0:3,0:3:2.97:0,3,20	0/0:4,0:4:12.02:0,12,145	0/0:3,0:1:3.01:0,3,45	0/0:6,0:6:12.04:0,12,161	0/0:3,0:3:6.02:0,6,93	0/0:4,0:3:6.02:0,6,98	0/0:8,0:8:18.06:0,18,294	./.	0/0:2,0:2:3.01:0,3,42	0/0:1,0:1:0:0,0,0	0/0:6,0:6:3.01:0,3,42
chr10	91417060	.	A	AT	661.60	PASS	AC=20;AF=0.455;AN=44;BaseQRankSum=1.060;DP=128;FS=2.228;HRun=1;HaplotypeScore=23.6762;InbreedingCoeff=0.6699;MQ=103.07;MQ0=2;MQRankSum=-2.795;QD=13.23;ReadPosRankSum=1.666;VQSLOD=2.6021;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:11.04:0,11,56	./.	0/0:21,0:11:23.41:0,23,176	0/0:21,0:11:20.06:0,20,150	1/1:2,0:2:2.98:22,3,0	0/0:4,0:4:11.96:0,12,99	0/0:3,0:3:6:0,6,52	1/1:16,0:16:29.98:265,30,0	1/1:5,0:5:11.68:102,12,0	0/0:2,0:2:5.04:0,5,34	0/0:3,0:2:5.97:0,6,47	1/1:1,0:1:3.01:42,3,0	0/0:3,0:3:6:0,6,51	1/1:8,0:8:17.56:123,18,0	./.	./.	0/0:1,0:1:2.92:0,3,17	./.	1/1:0,4:4:11.94:91,12,0	1/1:2,0:1:3:26,3,0	1/1:5,0:5:12.86:100,13,0	0/0:2,0:2:6:0,6,51	0/0:4,0:3:6:0,6,53	0/0:7,0:7:18:0,18,155	./.	1/1:1,0:1:3:28,3,0	./.	1/1:0,6:6:3:25,3,0
chr10	91417167	.	TTTC	T	993.01	PASS	AB=1.000;AC=19;AF=0.365;AN=52;BaseQRankSum=1.444;DP=211;FS=12.361;HRun=0;HaplotypeScore=39.1281;InbreedingCoeff=0.6818;MQ=74.12;MQ0=1;MQRankSum=-0.935;QD=17.73;ReadPosRankSum=1.363;VQSLOD=1.8590;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:48.07:0,48,821	0/0:1,0:1:3.01:0,3,46	0/1:7,0:6:9.97:11,0,10	0/0:14,0:10:0.28:0,0,1	0/0:14,0:14:27.05:0,27,380	1/1:0,2:2:6.02:88,6,0	1/1:3,5:8:18.06:247,18,0	0/0:6,0:6:6.02:0,6,117	0/0:6,0:6:6.02:0,6,111	1/1:0,5:5:15.02:153,15,0	1/1:2,6:8:9.03:132,9,0	0/0:7,0:7:15.04:0,15,238	./.	0/0:6,0:6:6.02:0,6,117	0/0:5,0:5:12.04:0,12,236	./.	0/0:23,0:23:60.11:0,60,982	1/1:4,6:10:15.05:221,15,0	0/0:9,0:8:8.99:0,9,128	0/0:10,0:10:23.94:0,24,270	0/0:3,0:3:3.01:0,3,59	1/1:3,0:3:8.89:80,9,0	1/1:0,1:1:3.01:44,3,0	1/1:3,0:3:2.98:21,3,0	1/1:0,8:8:12.04:176,12,0	0/0:10,0:10:19.85:0,20,232	0/0:7,0:7:21.07:0,21,394	0/0:11,0:11:15.03:0,15,231
chr10	91418448	.	T	TTTTTG	8034.46	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-5.282;DP=598;FS=4.233;HRun=0;HaplotypeScore=121.1655;InbreedingCoeff=0.9724;MQ=56.70;MQ0=14;MQRankSum=-6.167;QD=37.90;ReadPosRankSum=-0.078;VQSLOD=4.6581;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:58:0,58,982	0/0:3,0:3:9:0,9,129	0/0:39,0:13:15.02:0,15,190	0/0:59,0:15:19.36:0,19,163	1/1:8,11:19:39.05:932,39,0	0/0:25,0:25:60.17:0,60,1022	0/0:20,0:19:54.09:0,54,863	1/1:38,0:34:39.49:599,39,0	1/1:10,7:17:36.11:856,36,0	0/0:29,0:29:54.10:0,54,858	0/0:14,0:14:31.63:0,32,471	1/1:12,5:17:30.01:739,30,0	0/0:16,0:16:39.12:0,39,676	1/1:9,5:14:42.11:885,42,0	0/0:21,0:20:35.73:0,36,546	0/0:13,0:13:33.03:0,33,528	0/0:28,0:28:69.21:0,69,1187	0/0:21,0:21:45.06:0,45,720	1/1:21,3:22:26.90:457,27,0	1/1:5,1:6:8.98:140,9,0	1/1:9,3:12:15.04:332,15,0	0/0:17,0:16:36.02:0,36,578	0/0:8,0:8:12.04:0,12,218	0/0:29,0:29:72.22:0,72,1278	0/0:16,0:16:39.10:0,39,635	1/1:20,10:29:65.95:1512,66,0	1/1:20,5:25:51.11:1115,51,0	1/1:5,5:10:21.03:467,21,0
chr10	91418506	.	A	AC	16343.24	PASS	AB=0.929;AC=45;AF=0.804;AN=56;BaseQRankSum=-9.420;DP=540;FS=0.408;HRun=1;HaplotypeScore=60.3146;InbreedingCoeff=0.8874;MQ=58.32;MQ0=7;MQRankSum=-2.916;QD=37.57;ReadPosRankSum=0.976;VQSLOD=5.2638;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1322	0/0:8,0:8:24.04:0,24,292	0/1:12,1:10:17.92:18,0,257	0/0:16,0:10:29.96:0,30,352	1/1:1,18:19:42.14:624,42,0	1/1:0,21:21:60.20:899,60,0	1/1:1,21:22:57.19:852,57,0	1/1:2,10:10:27.03:358,27,0	1/1:1,22:23:60.20:897,60,0	1/1:0,18:18:54.18:807,54,0	1/1:0,20:20:54.18:792,54,0	1/1:1,16:16:45.15:658,45,0	1/1:0,17:17:47.96:719,48,0	1/1:1,13:13:36.12:539,36,0	0/0:19,0:19:57.19:0,57,739	1/1:0,17:17:45.15:674,45,0	0/0:27,0:27:78.25:0,78,1013	1/1:0,25:25:69.23:1034,69,0	1/1:1,15:16:42.12:606,42,0	1/1:1,17:18:45.15:670,45,0	1/1:1,17:18:45.15:672,45,0	1/1:3,22:25:54.18:808,54,0	1/1:2,11:12:30.10:449,30,0	1/1:0,41:41:99:1573,105,0	1/1:2,10:12:24.08:359,24,0	1/1:0,23:23:69.23:1032,69,0	1/1:0,18:18:54.18:807,54,0	1/1:2,11:13:33.11:494,33,0
chr10	91419883	.	TC	T	5951.81	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.837;DP=464;FS=34.196;HRun=1;HaplotypeScore=79.2542;InbreedingCoeff=0.9944;MQ=89.94;MQ0=0;MQRankSum=-3.303;QD=38.15;ReadPosRankSum=5.308;VQSLOD=2.5757;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:79.91:0,80,1263	0/0:9,0:9:27.08:0,27,405	0/0:17,0:17:23.01:0,23,672	0/0:23,0:23:63.17:0,63,961	0/0:16,0:16:45.15:0,45,719	1/1:0,17:17:45.15:627,45,0	1/1:0,14:14:42.09:563,42,0	0/0:38,0:38:99:0,114,1736	0/0:16,0:16:48.16:0,48,767	1/1:1,18:19:56.68:713,57,0	1/1:0,10:10:30.10:418,30,0	0/0:15,0:15:42.13:0,42,648	1/1:0,13:13:36.08:478,36,0	0/0:14,0:14:42.12:0,42,644	0/0:13,0:13:39.13:0,39,620	1/1:0,24:24:63.21:878,63,0	0/0:28,0:28:84.29:0,84,1335	1/1:0,21:21:57.14:795,57,0	0/0:23,0:23:69.22:0,69,1070	0/0:8,0:8:24.08:0,24,381	0/0:14,0:14:42.14:0,42,659	1/1:0,4:4:12.04:166,12,0	1/1:0,11:11:33.11:458,33,0	1/1:0,11:11:33.11:460,33,0	1/1:0,12:12:30.05:395,30,0	0/0:24,0:24:72.23:0,72,1107	0/0:13,0:13:39.08:0,39,551	0/0:9,0:9:27.09:0,27,431
chr10	91420057	.	TTA	T	1937.17	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.306;DP=363;FS=3.525;HRun=0;HaplotypeScore=38.8030;InbreedingCoeff=0.8643;MQ=61.94;MQ0=11;MQRankSum=0.081;QD=30.75;ReadPosRankSum=1.255;VQSLOD=4.6300;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:21:48.12:705,48,0	1/1:0,7:6:12.04:181,12,0	0/0:8,0:1:2.80:0,3,13	0/0:14,0:7:12.11:0,12,112	0/0:23,0:23:69.18:0,69,1107	0/0:12,0:12:36.02:0,36,542	0/0:1,0:1:3.01:0,3,52	0/0:28,0:24:69.20:0,69,1062	0/0:11,0:10:26.29:0,26,389	0/0:17,0:17:51.16:0,51,822	0/0:15,0:15:45.06:0,45,674	0/0:12,0:12:30.03:0,30,407	0/0:7,0:7:21.07:0,21,360	0/0:7,0:6:18.06:0,18,289	1/1:1,9:10:27.09:408,27,0	0/0:6,0:6:18.06:0,18,293	1/1:9,15:24:62.60:800,63,0	0/0:22,0:22:63.12:0,63,949	0/0:26,0:23:63.18:0,63,981	0/0:14,0:13:33.03:0,33,490	0/0:4,0:3:9.03:0,9,136	0/0:4,0:4:12.04:0,12,189	0/0:6,0:6:18.06:0,18,293	0/0:10,0:10:30.10:0,30,481	0/0:9,0:9:27.08:0,27,411	0/0:18,0:18:54.14:0,54,807	0/0:17,0:17:48.07:0,48,728	0/0:9,0:9:24.08:0,24,415
chr10	91420171	.	T	TCG	6434.11	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.053;DP=574;FS=7.224;HRun=0;HaplotypeScore=97.0223;InbreedingCoeff=0.9963;MQ=69.86;MQ0=2;MQRankSum=-7.038;QD=30.07;ReadPosRankSum=1.039;VQSLOD=6.3094;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.26:0,84,1261	0/0:8,0:8:24.07:0,24,346	0/0:42,0:33:71.12:0,71,906	0/0:47,0:29:29.81:0,30,540	1/1:4,16:21:54.10:669,54,0	0/0:23,0:23:66.16:0,66,903	0/0:19,0:19:54.12:0,54,759	1/1:8,15:22:61.91:630,62,0	1/1:6,8:14:33.06:417,33,0	0/0:18,0:18:54.16:0,54,759	0/0:10,0:10:30.07:0,30,415	1/1:6,9:15:29.92:306,30,0	0/0:11,0:11:27.08:0,27,392	1/1:0,9:10:27.05:341,27,0	0/0:9,0:9:27.09:0,27,413	0/0:26,0:26:72.22:0,72,1057	0/0:34,0:34:96.26:0,96,1380	0/0:21,0:21:63.13:0,63,872	1/1:9,17:25:63.90:693,64,0	1/1:1,9:10:30.03:353,30,0	1/1:7,23:30:72.20:944,72,0	0/0:11,0:11:27.07:0,27,369	0/0:14,0:14:42.11:0,42,596	0/0:22,0:22:66.13:0,66,918	0/0:13,0:13:33.03:0,33,450	1/1:8,17:25:26.20:827,26,0	1/1:9,25:34:89.81:1077,90,0	1/1:1,5:6:15.02:176,15,0
chr10	91420173	.	T	TG	5215	PASS	AB=0.560;AC=19;AF=0.339;AN=56;BaseQRankSum=16.474;DP=590;FS=2.636;HRun=0;HaplotypeScore=96.5680;InbreedingCoeff=0.7581;MQ=72.16;MQ0=3;MQRankSum=-5.615;QD=23.60;ReadPosRankSum=2.472;VQSLOD=5.9723;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:90.29:0,90,1240	0/0:8,0:8:24.08:0,24,335	0/0:44,0:35:92.56:0,93,1199	0/0:50,0:30:33.67:0,34,602	1/1:3,19:22:42.98:523,43,0	0/0:23,0:23:66.20:0,66,902	0/0:19,0:19:54.16:0,54,736	1/1:4,22:25:24.60:731,25,0	1/1:7,9:15:14.21:325,14,0	0/0:18,0:18:54.18:0,54,755	0/0:10,0:10:30.08:0,30,401	0/1:3,11:14:11.08:162,0,11	0/0:11,0:11:27.09:0,27,378	1/1:1,9:10:27.05:292,27,0	0/0:9,0:9:27.09:0,27,378	0/0:26,0:26:78.25:0,78,1071	0/0:33,0:33:99:0,99,1360	0/0:22,0:22:63.19:0,63,858	0/1:4,20:24:12.14:560,0,12	1/1:0,10:10:29.98:299,30,0	1/1:3,27:31:63.86:724,64,0	0/0:11,0:11:30.09:0,30,401	0/0:14,0:14:42.12:0,42,569	0/0:23,0:23:69.17:0,69,924	0/0:13,0:13:36.12:0,36,497	0/1:7,19:26:8.61:650,0,9	1/1:4,30:35:72.09:841,72,0	1/1:1,5:6:5.17:107,5,0
chr10	91420175	.	T	TG	1663.01	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=16.611;DP=580;FS=4.484;HRun=0;HaplotypeScore=107.5891;InbreedingCoeff=0.7648;MQ=73.24;MQ0=3;MQRankSum=-5.928;QD=7.77;ReadPosRankSum=4.141;VQSLOD=3.6677;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:96.32:0,96,1337	0/0:8,0:8:24.08:0,24,336	0/0:46,0:36:89.01:0,89,1169	0/0:51,0:31:38.80:0,39,627	1/1:21,0:21:21.71:197,22,0	0/0:21,0:21:60.18:0,60,819	0/0:17,0:17:51.13:0,51,690	0/1:24,0:23:34.15:128,0,34	1/1:13,4:16:2.32:110,2,0	0/0:18,0:18:54.18:0,54,740	0/0:9,0:9:27.09:0,27,378	1/1:13,0:13:25.41:154,25,0	0/0:11,0:11:27.09:0,27,376	1/1:11,0:11:16.07:89,16,0	0/0:10,0:10:30.09:0,30,403	0/0:26,0:26:78.24:0,78,1070	0/0:32,0:32:96.30:0,96,1323	0/0:22,0:22:60.11:0,60,794	0/1:22,0:21:4.67:150,0,5	0/1:11,0:11:1.82:82,0,2	1/1:30,1:31:21.07:244,21,0	0/0:9,0:9:27.09:0,27,377	0/0:13,0:13:39.13:0,39,545	0/0:23,0:23:66.22:0,66,921	0/0:13,0:13:33.11:0,33,460	1/1:22,3:25:7.52:250,8,0	1/1:31,1:33:63.64:368,64,0	1/1:6,0:6:14.29:92,14,0
chr10	91420578	.	CTATTAT	C	1407.19	PASS	AB=1.000;AC=29;AF=0.630;AN=46;BaseQRankSum=6.559;DP=249;FS=0.000;HRun=0;HaplotypeScore=60.3168;InbreedingCoeff=0.5274;MQ=59.32;MQ0=1;MQRankSum=-6.295;QD=9.77;ReadPosRankSum=2.981;VQSLOD=1.2994;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:14:18.06:242,18,0	./.	./.	./.	0/0:6,0:6:9.03:0,9,291	1/1:11,0:11:15.05:209,15,0	1/1:9,0:9:3.01:42,3,0	0/0:30,0:29:24.41:0,24,521	0/0:5,0:5:3.01:0,3,97	1/1:11,0:11:15.05:209,15,0	1/1:2,0:2:2.50:9,2,0	1/1:5,3:8:3.01:61,3,0	1/1:7,0:7:3.01:42,3,0	0/0:3,0:5:2.94:0,3,18	1/1:4,4:8:9.03:183,9,0	1/1:5,0:5:9.03:126,9,0	1/1:13,7:20:12.04:243,12,0	1/1:21,0:20:3.01:42,3,0	0/0:13,0:13:12.04:0,12,337	0/0:8,0:8:3.01:0,3,97	./.	1/1:4,0:4:3.01:42,3,0	1/1:9,0:9:3.01:42,3,0	./.	1/1:8,0:8:3.01:42,3,0	0/1:7,0:7:32.82:33,0,152	0/0:9,0:10:21:0,21,599	0/0:8,0:9:11.97:0,12,310
chr10	91420610	.	ATTATTATTATTT	A	2982.73	PASS	AB=0.900;AC=22;AF=0.440;AN=50;BaseQRankSum=6.237;DP=206;FS=8.651;HRun=0;HaplotypeScore=65.3589;InbreedingCoeff=0.6151;MQ=59.15;MQ0=3;MQRankSum=-2.645;QD=32.07;ReadPosRankSum=1.728;VQSLOD=1.2207;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:81.88:465,0,82	./.	0/0:6,0:2:5.99:0,6,54	./.	0/0:4,0:4:12.03:0,12,596	1/1:0,13:13:15.05:586,15,0	1/1:0,3:3:3.01:117,3,0	0/0:30,0:29:87.18:0,87,1917	0/0:4,0:4:12.03:0,12,409	1/1:0,11:11:33.03:739,33,0	1/1:5,0:5:13.97:161,14,0	0/0:4,0:4:5.99:0,6,71	1/1:0,2:2:3.01:117,3,0	0/0:6,0:6:15.02:0,15,219	0/0:7,0:7:18.03:0,18,250	1/1:0,8:8:9.03:352,9,0	0/0:17,0:17:23.98:0,24,532	1/1:0,17:17:3.01:117,3,0	0/0:9,0:9:27.07:0,27,882	0/0:4,0:4:12.02:0,12,270	0/0:2,0:2:6.01:0,6,135	1/1:0,2:2:5.93:134,6,0	1/1:0,7:7:8.55:151,9,0	./.	1/1:0,8:8:3.01:118,3,0	0/1:3,1:4:99:105,0,330	0/0:9,0:9:27.08:0,27,1384	0/0:6,0:6:18.06:0,18,910
chr10	91421134	.	A	AT	1349.90	PASS	AB=0.784;AC=17;AF=0.315;AN=54;BaseQRankSum=-2.338;DP=401;FS=1.757;HRun=12;HaplotypeScore=84.6794;InbreedingCoeff=-0.0367;MQ=63.15;MQ0=4;MQRankSum=0.109;QD=6.75;ReadPosRankSum=-0.595;VQSLOD=2.5092;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,2:34:0.52:1,0,349	0/1:8,0:8:3.41:3,0,110	0/0:21,0:14:4.45:0,4,76	0/1:9,0:4:6.11:6,0,16	0/0:10,0:11:22.88:0,23,159	0/1:7,6:13:22.55:157,0,23	0/1:5,6:11:12.12:149,0,12	0/0:23,0:23:31.94:0,32,228	0/0:9,0:10:16.67:0,17,106	1/1:8,6:12:4.34:133,4,0	0/1:9,6:14:37.59:154,0,38	0/0:11,0:11:26.83:0,27,196	0/1:7,6:13:21.19:160,0,21	0/0:16,0:16:6.23:0,6,188	0/0:19,0:18:32.58:0,33,214	0/1:4,2:6:8.32:47,0,8	0/0:28,0:27:49.21:0,49,337	0/1:8,4:11:21:149,0,21	0/0:15,0:15:17.82:0,18,129	0/0:6,0:6:11.93:0,12,88	0/0:17,1:18:3.60:0,4,190	1/1:2,3:5:9.01:88,9,0	0/1:5,5:10:2.98:76,0,3	0/1:11,11:22:4.47:275,0,4	0/1:8,3:10:14.83:100,0,15	0/0:20,0:22:12.01:0,12,201	0/1:13,1:14:2.10:2,0,147	./.
chr10	91422768	.	CA	C	2376.05	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.788;DP=499;FS=2.383;HRun=1;HaplotypeScore=48.2602;InbreedingCoeff=0.9965;MQ=58.47;MQ0=10;MQRankSum=4.134;QD=32.55;ReadPosRankSum=3.448;VQSLOD=3.3512;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:81.27:1113,81,0	1/1:0,7:7:21.07:293,21,0	0/0:28,0:14:36.07:0,36,518	0/0:28,0:18:51.17:0,51,789	0/0:18,0:18:54.16:0,54,817	0/0:19,0:19:45.12:0,45,652	0/0:24,0:24:65.88:0,66,983	0/0:22,0:20:60.18:0,60,912	0/0:16,0:16:48.14:0,48,721	0/0:12,0:12:36.11:0,36,538	0/0:18,0:18:54.15:0,54,814	0/0:10,0:10:30.08:0,30,434	0/0:12,0:12:33.10:0,33,502	0/0:10,0:10:27.09:0,27,419	1/1:0,11:11:21.07:293,21,0	0/0:9,0:9:24.08:0,24,383	1/1:0,23:23:60.20:837,60,0	0/0:17,0:17:48.15:0,48,740	0/0:25,0:22:60.20:0,60,958	0/0:19,0:18:54.16:0,54,816	0/0:27,0:26:75.21:0,75,1144	0/0:12,0:12:36.12:0,36,575	0/0:13,0:13:39.13:0,39,611	0/0:14,0:14:42.14:0,42,671	0/0:14,0:14:39.11:0,39,576	0/0:22,0:21:57.18:0,57,871	0/0:19,0:19:54.14:0,54,789	0/0:18,0:18:54.14:0,54,794
chr10	91424073	.	ATT	A	3618.65	PASS	AB=0.676;AC=16;AF=0.286;AN=56;BaseQRankSum=6.672;DP=603;FS=26.847;HRun=13;HaplotypeScore=68.1739;InbreedingCoeff=0.2059;MQ=45.66;MQ0=36;MQRankSum=4.661;QD=13.06;ReadPosRankSum=4.305;VQSLOD=0.4204;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:81.16:0,81,1087	0/0:1,0:4:6.01:0,6,57	0/0:13,0:3:6.02:0,6,81	0/0:11,0:2:5.99:0,6,58	0/0:10,0:16:22.79:0,23,203	0/1:14,16:29:99:315,0,237	0/1:11,16:26:99:348,0,126	0/0:13,0:13:30.10:0,30,420	0/0:9,0:10:12.02:0,12,142	1/1:8,31:39:67.20:818,67,0	0/1:5,13:17:10.35:258,0,10	0/0:17,0:19:46.92:0,47,575	0/1:4,8:10:59.76:177,0,60	0/0:6,0:11:11.82:0,12,144	0/0:9,0:12:14.53:0,15,167	0/1:8,14:23:99:290,0,230	0/0:16,0:19:36.94:0,37,436	0/1:13,8:22:99:121,0,433	0/0:14,0:16:33.07:0,33,425	0/0:6,0:15:7.26:0,7,60	0/0:29,0:30:62.18:0,62,822	1/1:4,16:21:41.77:389,42,0	1/1:4,16:20:1.34:348,1,0	0/1:18,13:31:99:319,0,322	1/1:4,10:14:24:233,24,0	0/0:11,0:19:38.60:0,39,460	0/1:6,0:9:3.11:3,0,63	0/0:2,0:4:3.01:0,3,43
chr10	91424367	.	T	TG	2383.71	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-1.590;DP=444;FS=2.885;HRun=4;HaplotypeScore=67.5487;InbreedingCoeff=0.9615;MQ=65.32;MQ0=19;MQRankSum=-4.360;QD=12.35;ReadPosRankSum=-0.168;VQSLOD=1.5478;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,1:20:50.08:311,50,0	1/1:6,0:6:8.65:61,9,0	0/0:52,0:16:25.54:0,26,212	0/0:52,0:11:24.21:0,24,164	1/1:12,0:13:20.25:127,20,0	0/0:9,0:9:18.01:0,18,164	0/0:17,0:16:35.77:0,36,282	1/1:8,19:28:71.15:536,71,0	1/1:9,0:8:17.53:105,18,0	0/0:18,0:14:39.02:0,39,366	0/0:13,0:13:29.88:0,30,241	1/1:7,1:8:11.22:58,11,0	0/0:6,0:6:13.65:0,14,88	1/1:8,0:8:17.12:94,17,0	1/1:7,0:7:11.61:66,12,0	0/0:12,0:11:32.81:0,33,272	1/1:18,1:19:39.75:241,40,0	0/0:18,0:17:12.93:0,13,274	1/1:17,1:18:28.15:194,28,0	1/1:8,1:9:19.04:93,19,0	1/1:9,0:8:17.03:112,17,0	0/0:11,0:11:26.96:0,27,228	0/0:11,0:11:16.87:0,17,123	0/0:13,0:11:23.85:0,24,203	0/0:16,0:16:30.67:0,31,271	1/1:21,0:16:46.77:322,47,0	1/1:12,0:12:32.35:214,32,0	1/1:5,0:4:11.80:76,12,0
chr10	91424389	.	TGAGA	T	1463.80	PASS	AB=0.934;AC=20;AF=0.357;AN=56;BaseQRankSum=-0.868;DP=549;FS=1.586;HRun=0;HaplotypeScore=79.8148;InbreedingCoeff=-0.4683;MQ=34.86;MQ0=53;MQRankSum=1.126;QD=4.88;ReadPosRankSum=-1.402;VQSLOD=1.7815;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:21:52.62:53,0,247	0/0:3,0:3:5.65:0,6,77	0/0:72,0:6:15.04:0,15,227	0/0:73,0:3:0.54:0,1,28	0/1:17,0:17:22.92:23,0,164	0/1:12,0:12:87.76:88,0,105	0/1:14,0:12:71.21:71,0,84	0/1:36,3:30:99:202,0,438	0/1:8,0:7:12.91:13,0,110	0/1:27,0:22:99:200,0,170	0/1:12,0:10:67.62:68,0,92	0/1:4,3:7:10.52:11,0,49	0/1:3,0:5:70.17:70,0,79	0/1:13,0:12:40.21:40,0,68	0/1:7,0:7:99:129,0,104	1/1:16,0:10:19.12:217,19,0	0/1:20,2:20:19.85:20,0,189	0/1:18,0:16:73.88:135,0,74	0/0:20,0:17:37.19:0,37,454	0/0:15,0:13:13.70:0,14,207	0/0:10,0:7:11:0,11,94	0/1:6,0:5:49.84:50,0,50	0/0:9,0:9:0.07:0,0,142	0/1:16,0:15:9.68:80,0,10	0/0:18,0:19:4.97:0,5,215	0/0:24,1:15:6.36:0,6,347	0/1:14,1:13:74.67:133,0,75	0/1:18,0:11:18.87:19,0,104
chr10	91424392	.	GATTTTTT	G	1420.52	PASS	AB=0.970;AC=13;AF=0.232;AN=56;BaseQRankSum=2.485;DP=555;FS=0.000;HRun=0;HaplotypeScore=100.7448;InbreedingCoeff=0.0903;MQ=35.53;MQ0=54;MQRankSum=-1.689;QD=9.05;ReadPosRankSum=-0.589;VQSLOD=2.0526;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:42.88:0,43,764	0/0:3,0:3:6.42:0,6,117	0/0:71,0:6:14.46:0,14,208	0/0:69,0:3:7.50:0,8,46	0/0:18,0:17:30.13:0,30,805	0/1:9,3:12:29.22:115,0,29	0/1:15,0:12:24.66:97,0,25	0/0:44,0:36:39.61:0,40,1338	0/0:9,0:7:15.05:0,15,405	0/1:24,0:22:71.22:337,0,71	0/1:13,0:11:16:139,0,16	0/0:7,0:7:7.57:0,8,220	0/1:5,0:5:12.67:13,0,25	0/0:13,0:12:21.06:0,21,382	0/0:9,0:9:2.43:0,2,274	1/1:15,1:10:23.99:173,24,0	0/0:23,0:21:8.83:0,9,674	0/1:19,0:17:66.11:66,0,91	0/0:20,0:17:39.99:0,40,889	0/0:13,0:13:30.03:0,30,540	0/0:9,0:6:3.92:0,4,80	0/1:7,0:5:1.01:107,0,1	0/1:8,0:8:39.15:105,0,39	1/1:17,0:16:17.92:240,18,0	0/1:19,0:19:60.78:189,0,61	0/0:27,0:17:48.16:0,48,1186	0/0:16,0:13:20.07:0,20,450	0/0:19,0:12:10.34:0,10,460
chr10	91426243	.	CTTTT	C	4028.97	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-10.009;DP=397;FS=7.274;HRun=15;HaplotypeScore=87.3519;InbreedingCoeff=0.8944;MQ=61.45;MQ0=3;MQRankSum=-3.001;QD=24.57;ReadPosRankSum=1.425;VQSLOD=2.6746;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:34:54.17:0,54,762	0/0:1,0:5:9.03:0,9,112	0/0:15,0:10:10.08:0,10,189	0/0:5,0:3:5.69:0,6,71	1/1:5,14:20:26.36:349,26,0	0/0:4,0:17:38.18:0,38,256	0/0:2,0:6:11.70:0,12,68	1/1:5,13:17:32.94:445,33,0	1/1:3,10:12:21.02:286,21,0	0/0:6,0:13:15.70:0,16,115	0/0:4,0:19:47.22:0,47,339	1/1:3,11:14:33.01:450,33,0	0/0:3,0:9:12.72:0,13,85	1/1:1,3:5:5.95:82,6,0	0/0:4,0:14:30.10:0,30,405	0/0:4,0:9:14.64:0,15,86	0/0:11,0:30:57.17:0,57,783	0/0:8,0:26:58.72:0,59,390	1/1:2,7:9:21:268,21,0	1/1:1,17:18:35.99:473,36,0	1/1:4,6:11:8.94:123,9,0	0/0:1,0:5:11.70:0,12,68	0/0:1,0:3:5.85:0,6,34	0/0:2,0:5:8.77:0,9,51	0/0:5,0:16:31.61:0,32,209	1/1:8,20:27:56.98:776,57,0	1/1:3,17:20:48.03:654,48,0	1/1:1,6:7:9.01:123,9,0
chr10	91427620	.	G	GA	2650.75	PASS	AB=0.720;AC=25;AF=0.446;AN=56;BaseQRankSum=-10.983;DP=499;FS=3.328;HRun=13;HaplotypeScore=70.8782;InbreedingCoeff=0.4779;MQ=64.79;MQ0=10;MQRankSum=0.015;QD=9.20;ReadPosRankSum=-1.286;VQSLOD=2.7405;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,15:28:32.99:298,33,0	1/1:0,4:4:9.01:84,9,0	0/0:28,1:16:19.09:0,19,109	0/1:25,0:15:11.47:11,0,101	1/1:7,15:24:10.73:289,11,0	0/0:6,0:20:31.75:0,32,114	0/0:10,0:23:22.96:0,23,68	1/1:9,4:15:17.87:175,18,0	0/1:4,10:14:33.10:140,0,33	0/0:5,0:17:26.65:0,27,78	0/0:1,0:15:24.43:0,24,71	1/1:7,17:24:19.28:247,19,0	0/0:3,0:15:25.93:0,26,89	0/1:7,10:17:48.54:80,0,49	0/1:7,8:15:0.47:155,0,0	0/0:1,0:11:14.26:0,14,41	0/1:9,12:22:44.18:217,0,44	0/0:4,0:14:5.12:0,5,36	1/1:6,5:10:9.72:122,10,0	1/1:6,17:22:44.99:403,45,0	0/1:10,1:12:27.37:27,0,45	0/0:2,0:9:13.32:0,13,43	0/0:2,0:13:20.34:0,20,59	0/0:3,0:19:26.47:0,26,77	0/0:4,0:22:31.95:0,32,106	1/1:6,17:23:22.84:365,23,0	0/1:10,9:20:5.45:207,0,5	1/1:3,1:4:3:28,3,0
chr10	91428394	.	GGA	G	6260.34	PASS	AB=0.714;AC=50;AF=0.962;AN=52;BaseQRankSum=-0.956;DP=167;FS=24.687;HRun=0;HaplotypeScore=75.6736;InbreedingCoeff=-0.0815;MQ=71.08;MQ0=0;MQRankSum=-2.834;QD=37.71;ReadPosRankSum=2.573;VQSLOD=4.1548;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,15:19:48.52:719,49,0	1/1:0,1:1:3.01:49,3,0	0/1:1,3:4:14.99:132,0,15	0/1:10,2:11:99:140,0,115	1/1:0,6:6:12.51:158,13,0	1/1:0,4:4:12.04:195,12,0	1/1:1,6:7:21.03:311,21,0	1/1:3,8:11:26.95:388,27,0	1/1:1,10:11:33.08:497,33,0	1/1:0,6:6:18.06:291,18,0	./.	1/1:1,6:7:21.03:311,21,0	1/1:0,3:3:9.03:146,9,0	1/1:0,6:6:18.06:288,18,0	1/1:0,8:8:24.08:387,24,0	1/1:0,2:2:6.02:97,6,0	1/1:2,4:6:5.88:87,6,0	1/1:0,4:4:12.04:195,12,0	1/1:1,8:9:24.04:350,24,0	1/1:0,1:1:3.01:45,3,0	1/1:1,7:8:19.10:260,19,0	1/1:1,4:5:12.04:194,12,0	1/1:0,3:3:6.02:97,6,0	1/1:0,7:7:14.72:232,15,0	1/1:1,2:3:6.02:97,6,0	1/1:0,5:5:15.05:224,15,0	1/1:1,7:8:24.08:372,24,0	./.
chr10	91428395	.	GA	G	1667.88	PASS	AB=0.857;AC=51;AF=0.981;AN=52;BaseQRankSum=0.899;DP=167;FS=15.558;HRun=3;HaplotypeScore=89.4968;InbreedingCoeff=0.0604;MQ=71.08;MQ0=0;MQRankSum=-1.356;QD=10.05;ReadPosRankSum=1.619;VQSLOD=0.4560;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,1:19:43.32:223,43,0	1/1:1,0:1:2.80:13,3,0	1/1:4,0:4:8.57:48,9,0	0/1:9,1:11:35.08:35,0,73	1/1:6,0:6:11.50:47,11,0	1/1:4,0:4:11.19:51,11,0	1/1:7,0:7:19.87:100,20,0	1/1:11,0:11:23.59:103,24,0	1/1:11,0:11:29.71:140,30,0	1/1:6,0:6:16.73:76,17,0	./.	1/1:7,0:7:19.83:99,20,0	1/1:3,0:3:8.39:38,8,0	1/1:6,0:6:16.84:81,17,0	1/1:8,0:8:22.51:106,23,0	1/1:2,0:2:5.60:26,6,0	1/1:5,1:6:4.35:17,4,0	1/1:4,0:4:11.19:51,11,0	1/1:9,0:9:21.61:103,22,0	1/1:1,0:1:1.55:4,2,0	1/1:8,0:8:18.22:79,18,0	1/1:5,0:5:11.14:51,11,0	1/1:3,0:3:6.48:28,6,0	1/1:7,0:7:12.44:54,12,0	1/1:3,0:3:5.60:25,6,0	1/1:5,0:5:13.17:63,13,0	1/1:7,1:8:20.53:96,21,0	./.
chr10	91428404	.	A	AC	4378.52	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=-0.979;DP=173;FS=12.965;HRun=0;HaplotypeScore=82.3298;InbreedingCoeff=0.6317;MQ=67.31;MQ0=2;MQRankSum=-5.295;QD=27.20;ReadPosRankSum=0.835;VQSLOD=4.2995;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:60.05:572,60,0	1/1:1,1:2:5.68:39,6,0	0/0:4,0:5:11.37:0,11,59	0/0:6,0:6:6.48:0,6,53	1/1:0,6:6:15.02:169,15,0	1/1:1,5:5:15.01:133,15,0	1/1:0,8:8:24.01:212,24,0	1/1:0,10:10:30.07:323,30,0	1/1:0,11:11:33.03:302,33,0	1/1:1,7:8:24.04:237,24,0	1/1:0,1:1:3:25,3,0	1/1:0,7:7:21.01:186,21,0	1/1:0,4:4:12.01:109,12,0	1/1:0,5:5:14.98:127,15,0	1/1:0,9:9:27.01:238,27,0	1/1:0,2:2:6.01:56,6,0	1/1:1,6:7:12.93:93,13,0	1/1:1,4:4:12.02:120,12,0	1/1:0,9:9:27.06:287,27,0	1/1:0,3:3:9.01:88,9,0	1/1:0,7:7:21.04:229,21,0	1/1:1,4:5:12.02:139,12,0	1/1:0,3:3:9.02:104,9,0	1/1:0,7:7:14.99:124,15,0	1/1:0,3:3:9:80,9,0	1/1:0,5:5:15.03:155,15,0	1/1:0,8:8:24.03:233,24,0	./.
chr10	91428406	.	CCCT	C	5116.20	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=-1.856;DP=181;FS=0.000;HRun=0;HaplotypeScore=86.6211;InbreedingCoeff=0.4509;MQ=71.79;MQ0=2;MQRankSum=-1.279;QD=29.57;ReadPosRankSum=1.092;VQSLOD=4.9946;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:60.15:641,60,0	1/1:0,2:2:6.02:73,6,0	1/1:6,0:6:8.93:60,9,0	0/0:8,0:7:6.50:0,6,48	1/1:0,6:6:15.02:149,15,0	1/1:1,5:5:15.04:158,15,0	1/1:0,8:8:24.06:254,24,0	1/1:0,10:10:26.98:331,27,0	1/1:1,11:12:36.04:378,36,0	1/1:2,7:9:27.08:335,27,0	1/1:0,1:1:3.01:30,3,0	1/1:0,7:7:21.05:222,21,0	1/1:0,4:4:12.03:130,12,0	1/1:0,5:5:15.03:153,15,0	1/1:0,9:9:27.07:284,27,0	1/1:0,2:2:6.02:66,6,0	1/1:2,6:8:15.51:175,16,0	1/1:2,4:5:15.01:161,15,0	1/1:0,9:9:27.08:333,27,0	1/1:0,3:3:8.98:88,9,0	1/1:1,7:8:23.61:219,24,0	1/1:2,4:6:14.98:137,15,0	1/1:0,3:3:9.02:89,9,0	1/1:0,7:7:15.03:150,15,0	1/1:0,3:3:9.02:95,9,0	1/1:0,5:5:15.05:180,15,0	1/1:0,8:8:13.10:222,13,0	./.
chr10	91428409	.	T	TC	4841.72	PASS	AB=1.000;AC=51;AF=0.944;AN=54;BaseQRankSum=-0.437;DP=224;FS=15.383;HRun=3;HaplotypeScore=95.1307;InbreedingCoeff=0.3044;MQ=76.94;MQ0=2;MQRankSum=-5.021;QD=22.42;ReadPosRankSum=-0.565;VQSLOD=3.3215;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:59.65:485,60,0	1/1:4,0:4:8.68:76,9,0	0/0:8,0:8:2.65:0,3,32	0/1:11,0:10:41.92:42,0,56	1/1:7,0:7:14.91:111,15,0	1/1:5,1:5:14.97:118,15,0	1/1:11,0:11:29.96:262,30,0	1/1:14,0:14:39.06:400,39,0	1/1:14,0:14:38.97:348,39,0	1/1:8,2:10:30.03:308,30,0	1/1:2,0:2:5.99:60,6,0	1/1:8,0:8:23.94:189,24,0	1/1:5,0:5:14.99:134,15,0	1/1:6,0:6:17.93:152,18,0	1/1:12,0:12:35.96:323,36,0	1/1:2,0:2:5.99:50,6,0	1/1:11,0:11:18:186,18,0	1/1:8,1:8:21:199,21,0	1/1:12,0:12:33.05:321,33,0	1/1:3,0:3:8.74:64,9,0	1/1:10,0:10:26.90:228,27,0	1/1:5,2:7:14.85:105,15,0	1/1:3,0:3:8.94:65,9,0	1/1:9,0:9:17.93:149,18,0	1/1:4,0:4:11.98:110,12,0	1/1:5,0:5:15.01:139,15,0	1/1:9,0:9:23.98:218,24,0	./.
chr10	91428784	.	GC	G	3486.04	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.149;DP=747;FS=7.191;HRun=4;HaplotypeScore=76.3916;InbreedingCoeff=0.9998;MQ=82.33;MQ0=2;MQRankSum=-1.797;QD=32.28;ReadPosRankSum=3.869;VQSLOD=4.2033;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,47:48:99:1475,123,0	1/1:0,14:14:39.12:463,39,0	0/0:28,0:27:77.93:0,78,929	0/0:25,0:23:52.92:0,53,657	0/0:26,0:26:72.24:0,72,1008	0/0:22,0:22:66.22:0,66,923	0/0:41,0:41:99:0,123,1687	0/0:32,0:32:93.26:0,93,1207	0/0:27,0:27:81.27:0,81,1130	0/0:31,0:31:93.30:0,93,1285	0/0:16,0:16:36.12:0,36,503	0/0:34,0:34:99:0,99,1376	0/0:29,0:29:84.24:0,84,1123	0/0:24,0:24:72.21:0,72,972	1/1:1,23:24:69.21:828,69,0	0/0:26,0:26:78.23:0,78,1072	1/1:0,22:22:60.18:720,60,0	0/0:24,0:24:72.23:0,72,987	0/0:31,0:31:93.21:0,93,1209	0/0:10,0:10:30.08:0,30,391	0/0:59,0:59:99:0,160,2206	0/0:26,0:26:78.25:0,78,1073	0/0:16,0:16:48.14:0,48,639	0/0:37,0:37:99:0,111,1503	0/0:17,0:17:48.16:0,48,671	0/0:25,0:25:75.24:0,75,1030	0/0:15,0:15:45.15:0,45,621	0/0:17,0:17:51.17:0,51,706
chr10	91429733	.	TAACC	T	149.93	PASS	AB=0.762;AC=4;AF=0.091;AN=44;BaseQRankSum=0.554;DP=229;FS=1.722;HRun=0;HaplotypeScore=51.3987;InbreedingCoeff=-0.1405;MQ=78.31;MQ0=13;MQRankSum=-3.979;QD=10.71;ReadPosRankSum=-0.203;VQSLOD=2.4277;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:29.44:0,29,474	./.	0/0:53,0:16:35.86:0,36,562	0/0:30,0:14:24.47:0,24,490	0/0:7,0:7:12.04:0,12,194	0/1:2,2:4:99:104,0,110	0/1:3,2:4:47.01:47,0,187	0/0:10,0:10:30.10:0,30,602	./.	./.	./.	0/0:2,0:2:6.02:0,6,118	0/1:3,0:3:46.02:46,0,91	0/0:4,0:4:6:0,6,65	0/0:7,0:7:12.04:0,12,221	0/1:1,1:2:48.01:56,0,48	0/0:16,0:15:24.08:0,24,412	0/0:12,0:12:33.11:0,33,592	0/0:11,0:11:33.07:0,33,645	0/0:2,0:2:6.02:0,6,117	0/0:5,0:5:11.81:0,12,204	./.	./.	0/0:5,0:5:6.01:0,6,73	0/0:2,0:2:2.84:0,3,14	0/0:15,0:15:43.29:0,43,686	0/0:11,0:11:15.05:0,15,271	0/0:2,0:2:3.01:0,3,55
chr10	91429737	.	C	CTT	1488.95	PASS	AB=0.792;AC=34;AF=0.773;AN=44;BaseQRankSum=-2.678;DP=242;FS=6.417;HRun=14;HaplotypeScore=39.2662;InbreedingCoeff=0.2404;MQ=76.18;MQ0=15;MQRankSum=-2.121;QD=7.56;ReadPosRankSum=0.804;VQSLOD=-0.5232;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,16:21:25.32:317,25,0	./.	0/1:56,0:16:1.31:1,0,47	0/0:35,0:14:1.07:0,1,43	1/1:2,5:7:6.02:78,6,0	0/1:4,0:4:5.76:6,0,41	0/0:5,0:5:5.71:0,6,33	1/1:4,4:8:11.63:125,12,0	./.	./.	./.	1/1:2,0:2:5.95:43,6,0	1/1:2,0:3:2.68:12,3,0	1/1:0,1:4:6.01:60,6,0	0/1:3,3:7:15.82:56,0,16	1/1:1,0:3:3.74:12,4,0	0/1:2,3:16:27.80:110,0,28	1/1:5,1:13:17.49:90,17,0	1/1:2,8:10:15.03:178,15,0	0/0:1,0:2:2.72:0,3,12	1/1:2,4:6:9.01:102,9,0	./.	./.	1/1:0,0:5:4.31:13,4,0	1/1:1,0:2:2.97:20,3,0	1/1:3,1:15:23.51:227,24,0	1/1:1,10:11:12.04:157,12,0	1/1:0,0:2:2.37:8,2,0
chr10	91454282	.	TC	T	20618.53	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.589;DP=706;FS=0.578;HRun=3;HaplotypeScore=88.8572;InbreedingCoeff=0.9905;MQ=88.04;MQ0=0;MQRankSum=-10.875;QD=31.43;ReadPosRankSum=6.808;VQSLOD=4.2394;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,54:56:99:1811,147,0	1/1:0,8:8:24.08:297,24,0	0/0:24,0:24:61.36:0,61,660	0/0:26,0:26:62.08:0,62,738	1/1:0,18:18:50.90:606,51,0	1/1:0,26:26:69.22:854,69,0	1/1:0,29:29:63.20:780,63,0	1/1:0,24:24:66.03:781,66,0	1/1:0,23:23:60.19:742,60,0	1/1:1,19:20:57.03:670,57,0	1/1:0,12:12:36.06:425,36,0	1/1:1,21:22:57.07:684,57,0	1/1:2,22:24:63.19:771,63,0	1/1:1,31:32:81.25:1003,81,0	1/1:0,24:24:60.19:743,60,0	1/1:2,21:23:60.19:743,60,0	1/1:3,57:60:99:1709,138,0	1/1:1,35:36:93.29:1152,93,0	1/1:1,14:15:42.07:480,42,0	1/1:0,15:15:41.86:485,42,0	1/1:3,35:38:93.29:1151,93,0	1/1:1,23:24:60.19:742,60,0	1/1:0,13:13:30.05:354,30,0	1/1:0,30:30:81.20:985,81,0	1/1:1,24:25:63.20:780,63,0	1/1:1,21:22:63.17:756,63,0	1/1:0,32:32:75.22:928,75,0	1/1:0,5:5:15.05:185,15,0
chr10	91454784	.	ACCC	A	6297.99	PASS	AB=0.630;AC=23;AF=0.411;AN=56;BaseQRankSum=-5.723;DP=503;FS=34.368;HRun=12;HaplotypeScore=105.5768;InbreedingCoeff=0.8992;MQ=76.05;MQ0=0;MQRankSum=-2.865;QD=26.69;ReadPosRankSum=7.460;VQSLOD=1.0520;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:23:48.09:0,48,720	0/0:3,0:3:2.97:0,3,20	0/0:17,0:15:10.60:0,11,187	0/0:22,0:22:37.55:0,38,420	0/0:8,0:13:23.43:0,23,172	1/1:4,15:19:36.09:455,36,0	1/1:7,21:29:63.08:776,63,0	0/0:14,0:23:22.20:0,22,187	0/0:8,0:19:45.98:0,46,385	1/1:5,17:22:57.14:704,57,0	1/1:2,6:8:18.03:227,18,0	0/0:7,0:18:19.40:0,19,93	1/1:5,19:24:53.75:682,54,0	0/0:15,0:21:42.28:0,42,356	0/0:10,0:12:30.03:0,30,425	1/1:2,17:19:54.17:682,54,0	0/0:19,0:20:48.14:0,48,865	1/1:2,11:14:39.05:473,39,0	0/0:7,0:14:28.07:0,28,232	0/0:8,0:9:14.47:0,14,121	0/0:19,0:28:38.40:0,38,309	1/1:8,20:28:57.15:720,57,0	1/1:3,11:14:30.08:379,30,0	1/1:3,22:25:54.10:682,54,0	1/1:3,13:17:42.03:510,42,0	0/1:7,1:17:8.48:8,0,165	0/0:8,0:15:25.94:0,26,197	0/0:4,0:9:23.96:0,24,226
chr10	91455153	.	T	TC	1601.49	PASS	AB=0.831;AC=23;AF=0.426;AN=54;BaseQRankSum=-1.869;DP=376;FS=6.281;HRun=10;HaplotypeScore=47.8580;InbreedingCoeff=0.4751;MQ=76.52;MQ0=0;MQRankSum=-0.766;QD=8.01;ReadPosRankSum=-3.372;VQSLOD=0.6296;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:14,13:27:3.60:157,0,4	./.	0/0:17,0:17:26.16:0,26,179	0/0:11,0:10:14.29:0,14,88	1/1:2,7:9:5.95:50,6,0	0/0:18,0:19:40.92:0,41,319	0/0:21,0:23:46.43:0,46,350	0/1:12,6:18:26.47:136,0,26	0/1:5,0:5:18.21:18,0,19	0/0:12,0:12:14.95:0,15,123	0/0:7,0:7:5.97:0,6,49	1/1:2,7:9:11.99:116,12,0	0/0:12,0:12:29.95:0,30,246	1/1:2,7:9:18.05:192,18,0	1/1:8,0:9:17.53:130,18,0	0/0:15,0:16:41.44:0,41,329	1/1:26,1:28:44.68:392,45,0	0/0:15,0:16:43.98:0,44,351	0/1:10,5:15:1.54:87,0,2	1/1:6,1:7:3.01:32,3,0	0/1:12,15:27:9.08:102,0,9	0/1:6,0:6:8.32:8,0,83	0/0:5,0:5:12.85:0,13,97	0/0:21,0:23:45.83:0,46,337	0/0:13,0:13:23.43:0,23,178	1/1:12,2:15:12.04:130,12,0	0/1:7,0:7:9.63:98,0,10	1/1:6,3:9:15:144,15,0
chr10	91455253	.	TTTAA	T	2056.03	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=-5.638;DP=507;FS=2.879;HRun=0;HaplotypeScore=117.7991;InbreedingCoeff=0.2547;MQ=76.93;MQ0=7;MQRankSum=-2.767;QD=5.73;ReadPosRankSum=0.541;VQSLOD=2.6403;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:18.46:0,18,223	0/0:3,0:3:6.66:0,7,21	0/1:47,0:18:53.51:54,0,337	0/0:25,0:15:3.76:0,4,236	0/1:28,0:28:73.21:73,0,258	1/1:17,0:17:29.05:162,29,0	0/1:15,0:15:14.84:108,0,15	0/1:19,0:19:91.51:92,0,250	0/0:16,0:16:19:0,19,60	1/1:20,1:21:37.79:351,38,0	1/1:14,1:15:24.94:174,25,0	0/0:14,0:14:23.10:0,23,120	1/1:17,0:17:31.31:170,31,0	0/0:13,0:13:5.32:0,5,74	0/0:15,0:15:29:0,29,172	1/1:14,1:15:23.09:140,23,0	0/0:27,0:27:29.98:0,30,248	0/1:15,0:15:37.43:57,0,37	0/1:7,0:7:37.68:115,0,38	0/1:21,0:21:42.88:43,0,232	0/0:7,0:7:12.66:0,13,87	1/1:10,0:10:20.41:132,20,0	1/1:19,0:19:31.87:202,32,0	1/1:9,1:10:17.13:134,17,0	1/1:20,0:20:34.85:194,35,0	0/1:19,0:18:32.83:33,0,164	0/1:23,0:23:3.22:3,0,163	0/1:21,0:21:14.20:14,0,91
chr10	91455254	.	TTAA	T	6551.88	PASS	AB=0.987;AC=42;AF=0.750;AN=56;BaseQRankSum=2.872;DP=493;FS=11.223;HRun=0;HaplotypeScore=90.8036;InbreedingCoeff=-0.1587;MQ=74.17;MQ0=7;MQRankSum=-4.032;QD=13.94;ReadPosRankSum=9.115;VQSLOD=2.6107;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:18.20:130,0,18	1/1:3,0:3:6.66:22,7,0	0/1:44,0:15:69.56:70,0,169	0/0:23,0:13:10.33:0,10,155	0/1:27,0:27:38.99:192,0,39	1/1:0,17:17:30.10:465,30,0	1/1:1,14:15:0.96:381,1,0	0/1:19,0:19:73.55:156,0,74	1/1:16,0:16:23.23:89,23,0	1/1:3,18:21:59.22:712,59,0	1/1:1,14:15:38.86:506,39,0	0/1:13,0:13:8:41,0,8	1/1:0,17:17:32.90:505,33,0	0/1:12,1:13:0.32:77,0,0	0/1:14,0:14:22.43:40,0,22	1/1:1,14:15:23.57:324,24,0	0/1:25,1:26:44.14:102,0,44	1/1:4,11:15:5.63:251,6,0	0/1:7,0:7:9.52:130,0,10	0/1:21,0:21:64.01:139,0,64	0/1:5,0:5:12.45:12,0,15	1/1:0,10:10:21.06:314,21,0	1/1:1,17:18:40.87:582,41,0	1/1:1,8:9:18.06:263,18,0	1/1:0,20:20:36.12:558,36,0	0/1:18,1:18:24.75:174,0,25	1/1:21,1:22:6.85:155,7,0	1/1:20,1:21:17.19:161,17,0
chr10	91455255	.	TAA	T	8946.90	PASS	AB=0.989;AC=54;AF=0.964;AN=56;BaseQRankSum=-5.898;DP=489;FS=5.937;HRun=8;HaplotypeScore=76.4390;InbreedingCoeff=0.3166;MQ=74.32;MQ0=7;MQRankSum=-4.264;QD=18.30;ReadPosRankSum=4.686;VQSLOD=2.7005;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:28:54.08:634,54,0	1/1:0,3:3:9.03:109,9,0	0/1:42,1:15:73.04:73,0,128	0/1:23,0:13:0.24:0,0,62	1/1:12,14:26:62.74:691,63,0	1/1:17,0:17:29.96:247,30,0	1/1:15,0:15:26.87:214,27,0	1/1:4,13:18:42.08:471,42,0	1/1:1,15:16:30.06:350,30,0	1/1:19,2:21:53.92:482,54,0	1/1:15,0:15:32.94:278,33,0	1/1:1,11:13:24.06:281,24,0	1/1:17,0:17:32.47:264,32,0	1/1:2,11:13:24.06:281,24,0	1/1:2,12:14:27.08:329,27,0	1/1:15,0:15:20.97:183,21,0	1/1:4,21:26:45.04:506,45,0	1/1:12,3:15:24.01:233,24,0	1/1:0,7:7:18.05:208,18,0	1/1:2,19:21:42.04:465,42,0	1/1:1,4:5:9.03:110,9,0	1/1:10,0:10:20.99:183,21,0	1/1:17,1:18:41.79:349,42,0	1/1:9,0:9:17.98:148,18,0	1/1:20,0:20:35.96:296,36,0	1/1:2,15:18:44.91:476,45,0	1/1:3,17:21:48.60:562,49,0	1/1:2,18:21:45.12:524,45,0
chr10	91455610	.	TATGA	T	5544.90	PASS	AB=0.947;AC=24;AF=0.444;AN=54;BaseQRankSum=-12.141;DP=656;FS=8.342;HRun=0;HaplotypeScore=132.6545;InbreedingCoeff=0.8416;MQ=80.68;MQ0=5;MQRankSum=0.812;QD=18.24;ReadPosRankSum=1.708;VQSLOD=4.3183;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:42:69.24:0,69,1206	0/0:3,0:9:15.05:0,15,260	./.	0/0:33,0:31:12.51:0,13,263	1/1:5,14:19:36.12:561,36,0	0/0:18,0:18:42.14:0,42,813	0/0:27,0:27:25.18:0,25,792	1/1:28,10:38:33.09:473,33,0	1/1:10,13:23:36.12:571,36,0	0/0:21,0:21:9.64:0,10,550	0/0:15,0:15:39.13:0,39,723	1/1:7,6:13:18.06:286,18,0	0/0:25,0:24:42.14:0,42,808	1/1:4,14:18:33.11:524,33,0	0/0:9,0:26:48.16:0,48,852	0/1:24,2:26:8.49:8,0,638	0/0:15,0:34:57.17:0,57,977	0/0:35,0:35:54.27:0,54,1353	1/1:15,6:21:18.06:286,18,0	1/1:4,10:14:24.08:361,24,0	1/1:17,21:38:51.17:810,51,0	0/0:17,0:17:39.11:0,39,737	0/0:20,0:20:14.09:0,14,614	0/1:27,1:28:15.40:15,0,878	0/0:14,0:14:24.08:0,24,471	1/1:13,9:22:27.07:404,27,0	1/1:5,13:20:39.12:580,39,0	1/1:2,22:22:42.14:666,42,0
chr10	91456437	.	G	GC	2191.99	PASS	AB=0.900;AC=38;AF=0.679;AN=56;BaseQRankSum=-0.696;DP=483;FS=4.424;HRun=10;HaplotypeScore=71.6593;InbreedingCoeff=-0.1298;MQ=77.56;MQ0=5;MQRankSum=-2.401;QD=5.59;ReadPosRankSum=4.047;VQSLOD=1.3007;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:8.95:65,9,0	1/1:1,0:4:5.99:49,6,0	0/0:46,0:22:13.98:0,14,156	0/0:41,0:26:8.42:0,8,163	0/1:9,0:9:5.32:5,0,12	0/1:8,8:17:12.76:67,0,13	1/1:10,14:26:10.53:285,11,0	0/1:22,0:22:3.34:3,0,35	0/1:17,0:17:33.41:69,0,33	0/1:5,5:10:6.52:134,0,7	1/1:8,5:14:21.30:171,21,0	0/1:7,0:7:10.99:11,0,12	0/1:3,8:12:10.01:91,0,10	0/1:12,0:12:16.19:16,0,29	1/1:11,0:12:11.34:79,11,0	1/1:4,8:15:2.07:182,2,0	1/1:33,0:33:2.48:191,2,0	1/1:13,9:23:25.86:415,26,0	0/1:20,0:20:24.05:24,0,100	1/1:4,0:4:2.04:6,2,0	0/1:25,0:25:31.21:31,0,59	1/1:6,0:6:10.80:77,11,0	1/1:4,3:7:3.01:32,3,0	1/1:10,9:21:24.50:243,24,0	0/1:11,1:12:9.68:10,0,106	0/1:13,0:14:6.98:7,0,34	0/1:18,1:18:14.21:50,0,14	0/1:8,0:9:8.48:37,0,8
chr10	91456447	.	C	CT	2757.39	PASS	AB=0.929;AC=37;AF=0.661;AN=56;BaseQRankSum=-1.837;DP=521;FS=4.090;HRun=9;HaplotypeScore=76.8426;InbreedingCoeff=0.2662;MQ=76.27;MQ0=10;MQRankSum=-1.970;QD=7.53;ReadPosRankSum=4.942;VQSLOD=1.4777;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:25:15.70:104,16,0	1/1:3,0:3:5.02:20,5,0	0/0:60,0:21:28.79:0,29,253	0/0:63,0:33:20.34:0,20,234	1/1:0,8:8:11.88:91,12,0	0/1:12,0:12:1.50:2,0,52	0/1:21,0:21:46.24:46,0,96	1/1:5,7:12:18.89:162,19,0	1/1:6,10:16:17.13:321,17,0	0/0:11,0:11:5.67:0,6,96	0/1:15,0:16:11.88:12,0,12	1/1:1,9:11:12.02:125,12,0	0/1:14,0:14:6.94:7,0,37	0/1:3,8:13:6.90:115,0,7	1/1:1,1:14:11.35:86,11,0	0/1:15,0:15:43.58:44,0,44	1/1:4,1:41:36.59:255,37,0	0/1:23,0:22:42.60:43,0,82	1/1:7,12:21:16.98:306,17,0	1/1:0,7:7:11.78:86,12,0	1/1:7,13:21:25.26:251,25,0	0/0:10,0:10:2.55:0,3,16	0/1:5,0:6:1.72:2,0,17	0/1:19,0:19:29.68:30,0,97	0/0:10,0:10:3.79:0,4,94	1/1:4,15:20:50.22:406,50,0	1/1:3,11:19:6.54:263,7,0	1/1:5,3:8:16.27:158,16,0
chr10	91456928	.	A	AT	4813.79	PASS	AB=0.806;AC=24;AF=0.429;AN=56;BaseQRankSum=-11.114;DP=567;FS=3.044;HRun=10;HaplotypeScore=58.8879;InbreedingCoeff=0.6073;MQ=79.57;MQ0=0;MQRankSum=0.731;QD=16.71;ReadPosRankSum=0.677;VQSLOD=5.2894;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:32:79.92:0,80,646	0/0:8,0:8:20.98:0,21,172	0/1:19,1:18:24.34:24,0,63	0/1:18,1:18:31.84:32,0,98	0/0:21,0:21:44.91:0,45,369	0/1:5,14:20:1.33:382,0,1	1/1:8,17:25:29.82:517,30,0	0/0:28,0:28:68.90:0,69,565	0/0:22,0:22:53.85:0,54,434	1/1:4,20:25:66:684,66,0	1/1:0,5:5:12.03:128,12,0	0/0:19,0:19:47.91:0,48,391	1/1:4,20:24:29.50:519,29,0	0/0:18,0:18:50.92:0,51,415	0/0:15,2:17:9.95:0,10,285	1/1:2,12:14:33.08:352,33,0	0/0:29,2:32:21.97:0,22,582	1/1:2,19:21:54.12:568,54,0	0/1:17,3:20:17.01:17,0,279	0/0:20,0:20:44.93:0,45,369	0/0:20,1:21:24.93:0,25,411	1/1:2,12:14:36.09:382,36,0	0/1:5,6:12:3.72:154,0,4	1/1:3,16:19:48.12:512,48,0	1/1:2,18:20:29.49:519,29,0	0/1:24,3:27:24.04:24,0,445	0/0:29,0:29:74.89:0,75,616	0/0:12,0:12:29.96:0,30,246
chr10	91458520	.	AGGATCTCCGAGTG	A	23036.78	PASS	AB=0.740;AC=30;AF=0.536;AN=56;BaseQRankSum=17.576;DP=646;FS=6.898;HRun=0;HaplotypeScore=241.6099;InbreedingCoeff=0.8377;MQ=81.84;MQ0=0;MQRankSum=-17.478;QD=61.93;ReadPosRankSum=4.656;VQSLOD=3.6626;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,34:48:63.06:2409,63,0	1/1:0,9:9:14.98:598,15,0	0/0:19,0:19:51.17:0,51,2712	0/0:30,0:30:81.28:0,81,4198	1/1:3,16:19:24.08:891,24,0	0/0:25,0:25:75.26:0,75,4619	0/0:29,0:29:87.30:0,87,5107	1/1:6,17:23:50.97:1376,51,0	1/1:3,24:27:57.14:2273,57,0	0/0:27,0:27:78.27:0,78,4733	0/0:19,0:19:48.15:0,48,2826	1/1:4,22:26:48.10:1811,48,0	0/0:33,0:33:99:0,99,5625	1/1:1,19:20:48.16:1915,48,0	1/1:6,20:26:51.11:1933,51,0	0/1:22,1:23:50.51:51,0,4261	1/1:9,22:31:33.03:1132,33,0	0/0:23,0:23:66.23:0,66,4170	1/1:1,12:13:32.96:828,33,0	1/1:2,15:17:39.13:1556,39,0	1/1:7,21:28:15.52:599,16,0	0/0:13,0:13:33.11:0,33,1919	0/0:13,0:13:39.13:0,39,2240	0/0:28,0:28:81.28:0,81,5085	0/0:15,0:15:42.14:0,42,2662	0/1:3,33:36:99:3391,0,485	1/1:0,21:21:51.18:2034,51,0	1/1:2,3:5:6.02:240,6,0
chr10	91458976	.	G	GTTCTC	29433.05	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.692;DP=401;FS=15.126;HRun=0;HaplotypeScore=77.3549;InbreedingCoeff=0.8238;MQ=86.01;MQ0=0;MQRankSum=-9.950;QD=81.76;ReadPosRankSum=5.244;VQSLOD=6.1916;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,29:33:78.18:2432,78,0	1/1:0,4:4:12.04:397,12,0	0/0:18,0:18:46:0,46,860	0/0:23,0:23:62.70:0,63,1255	1/1:2,9:11:33.11:982,33,0	1/1:1,11:14:36.12:1165,36,0	1/1:3,16:23:54.19:1761,54,0	1/1:7,12:20:57.18:1715,57,0	1/1:1,12:13:36.12:1193,36,0	1/1:0,10:11:33.11:999,33,0	1/1:0,1:3:2.97:20,3,0	1/1:2,16:18:54.15:1685,54,0	1/1:3,13:17:44.99:1493,45,0	1/1:4,11:16:42.14:1367,42,0	1/1:4,19:24:66.23:2158,66,0	1/1:0,8:10:24.08:798,24,0	1/1:2,20:24:51.13:1585,51,0	1/1:3,20:23:66.18:2029,66,0	1/1:2,11:14:39.12:1155,39,0	1/1:2,3:6:9.03:294,9,0	1/1:2,9:13:30.02:752,30,0	1/1:3,0:3:9.02:150,9,0	1/1:0,7:7:21.07:693,21,0	1/1:3,16:20:48.16:1530,48,0	1/1:0,5:6:15.05:496,15,0	1/1:3,10:13:36.12:1192,36,0	1/1:0,11:11:33.11:1091,33,0	1/1:0,3:3:9.03:299,9,0
chr10	91460867	.	CTTGT	C	7197.10	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.060;DP=838;FS=0.740;HRun=0;HaplotypeScore=134.1759;InbreedingCoeff=0.9952;MQ=64.68;MQ0=2;MQRankSum=0.847;QD=23.44;ReadPosRankSum=3.527;VQSLOD=4.3949;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,114,2682	0/0:13,0:13:18.06:0,18,408	0/0:32,0:27:15.83:0,16,387	0/0:19,0:18:27.07:0,27,518	0/0:33,0:33:66.21:0,66,1496	1/1:14,22:36:48.16:768,48,0	1/1:14,16:30:39.13:624,39,0	0/0:28,0:28:30.09:0,30,639	0/0:34,0:34:63.21:0,63,1446	1/1:13,12:24:36.11:551,36,0	1/1:6,7:14:21.02:288,21,0	0/0:31,0:31:75.26:0,75,1783	1/1:7,20:27:57.15:884,57,0	0/0:26,0:26:28.36:0,28,1149	0/0:42,0:42:75.23:0,75,1715	1/1:10,23:33:54.37:865,54,0	0/0:39,0:39:63.22:0,63,1424	1/1:10,16:26:42.01:672,42,0	0/0:24,0:24:21.07:0,21,498	0/0:33,0:33:63.21:0,63,1432	0/0:42,0:42:78.26:0,78,1754	1/1:16,14:30:39.13:624,39,0	1/1:7,15:22:29.94:480,30,0	1/1:13,27:40:60.20:961,60,0	1/1:10,14:24:30.10:480,30,0	0/0:33,0:33:57.19:0,57,1335	0/0:29,0:29:60.18:0,60,1383	0/0:18,0:18:30.10:0,30,719
chr10	91461230	.	GA	G	3168.94	PASS	AB=0.584;AC=20;AF=0.357;AN=56;BaseQRankSum=-11.289;DP=601;FS=2.782;HRun=12;HaplotypeScore=80.3629;InbreedingCoeff=0.7847;MQ=63.86;MQ0=3;MQRankSum=0.517;QD=13.43;ReadPosRankSum=5.152;VQSLOD=4.1312;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:42:51.36:0,51,324	0/0:0,0:1:2.84:0,3,14	0/0:23,1:14:29.58:0,30,241	0/0:16,0:9:18.65:0,19,167	0/0:7,0:24:48.33:0,48,277	1/1:3,19:21:44.83:348,45,0	0/1:7,22:29:18.76:236,0,19	0/0:15,1:33:26.09:0,26,345	0/0:0,0:11:9.12:0,9,49	1/1:3,24:28:67.69:508,68,0	1/1:1,18:19:50.59:384,51,0	0/0:8,0:10:20.71:0,21,117	1/1:1,10:11:23.89:186,24,0	0/0:5,0:16:14.63:0,15,96	0/0:5,0:17:17.37:0,17,118	1/1:3,15:18:29.65:231,30,0	0/0:21,0:37:88.59:0,89,508	1/1:5,22:28:55.78:418,56,0	0/0:11,0:22:43.93:0,44,262	0/0:8,0:23:36.52:0,37,191	0/0:3,0:14:17.11:0,17,102	1/1:2,12:14:20.43:162,20,0	1/1:5,14:17:2.47:201,2,0	1/1:4,23:27:59.76:464,60,0	0/1:7,14:21:8.23:237,0,8	0/0:12,1:23:37.67:0,38,309	0/0:20,0:31:66.72:0,67,394	0/0:3,0:15:17.04:0,17,86
chr10	91463550	.	GTGGACCAGGC	G	6434.74	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=12.067;DP=476;FS=0.000;HRun=0;HaplotypeScore=141.3123;InbreedingCoeff=0.9476;MQ=76.18;MQ0=0;MQRankSum=-12.414;QD=43.48;ReadPosRankSum=2.349;VQSLOD=4.2047;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,105,4821	0/0:11,0:11:27.09:0,27,1288	0/0:7,0:7:18.06:0,18,578	0/0:15,0:15:29.21:0,29,605	0/0:3,0:3:9.03:0,9,391	1/1:2,7:9:18.06:572,18,0	1/1:13,4:17:12.04:358,12,0	0/0:31,0:31:63.21:0,63,2634	0/0:16,0:16:48.15:0,48,2201	1/1:2,6:8:15.05:476,15,0	1/1:3,5:8:9.03:286,9,0	0/0:19,0:19:48.16:0,48,2191	1/1:6,13:19:33.11:1048,33,0	0/0:21,0:21:54.19:0,54,2616	0/0:20,0:20:54.17:0,54,2387	1/1:7,9:16:33.11:1044,33,0	0/0:39,0:39:99:0,105,5083	1/1:8,12:20:24.08:756,24,0	0/0:17,0:17:23.97:0,24,895	0/0:8,0:8:15.05:0,15,523	0/0:42,0:42:99:0,117,5313	1/1:2,7:9:18.06:561,18,0	1/1:4,5:9:6.02:191,6,0	1/1:11,12:23:15.05:476,15,0	1/1:1,9:10:21.07:667,21,0	0/0:15,0:15:39.11:0,39,1557	0/0:16,0:16:45.15:0,45,2277	0/0:4,0:4:12.04:0,12,621
chr10	91463555	.	CCAGGCTGGA	C	3776.94	PASS	AB=0.955;AC=16;AF=0.286;AN=56;BaseQRankSum=12.994;DP=471;FS=0.500;HRun=0;HaplotypeScore=140.7938;InbreedingCoeff=0.4749;MQ=74.70;MQ0=0;MQRankSum=-11.575;QD=27.37;ReadPosRankSum=3.584;VQSLOD=3.3416;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,111,5052	0/0:11,0:11:33.10:0,33,1348	0/0:7,0:7:16.73:0,17,720	0/0:13,0:13:35.55:0,36,840	0/0:5,0:5:11.67:0,12,557	1/1:7,0:7:18.06:349,18,0	0/1:12,2:14:8.74:222,0,9	0/0:28,0:28:75.25:0,75,3024	0/0:17,0:17:48.16:0,48,2186	0/1:7,0:7:4.63:271,0,5	1/1:8,0:8:9.03:174,9,0	0/0:19,0:19:51.17:0,51,2242	0/1:15,3:18:9.39:606,0,9	0/0:21,0:21:63.20:0,63,2772	0/0:20,0:20:60.21:0,60,2595	1/1:12,3:15:11.39:615,11,0	0/0:37,0:37:99:0,111,5093	0/1:20,0:20:99:420,0,108	0/0:18,0:18:42.12:0,42,1586	0/0:6,0:6:18.06:0,18,622	0/0:43,0:43:99:0,123,5605	1/1:8,0:8:18.06:339,18,0	0/1:8,0:8:47.95:104,0,48	0/1:23,0:23:35.82:270,0,36	1/1:10,0:10:21.07:407,21,0	0/0:25,0:25:4.18:0,4,1620	0/0:17,0:17:51.16:0,51,2329	0/0:5,0:5:15.05:0,15,639
chr10	91463556	.	CAGGCTGGA	C	3149.11	PASS	AB=0.958;AC=17;AF=0.304;AN=56;BaseQRankSum=12.938;DP=464;FS=1.048;HRun=0;HaplotypeScore=131.8520;InbreedingCoeff=0.4006;MQ=74.93;MQ0=0;MQRankSum=-11.867;QD=19.68;ReadPosRankSum=4.137;VQSLOD=3.0805;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,4948	0/0:12,0:12:36.11:0,36,1371	0/0:7,0:7:20.66:0,21,757	0/0:13,0:13:36.09:0,36,973	0/0:5,0:5:11.65:0,12,553	1/1:7,0:7:18.06:307,18,0	0/1:13,0:13:8.91:189,0,9	0/0:25,0:25:75.26:0,75,2967	0/0:18,0:18:51.18:0,51,2135	0/1:7,0:7:21.78:235,0,22	1/1:8,0:8:9.03:153,9,0	0/0:18,0:18:54.19:0,54,2227	0/1:18,0:18:9.77:529,0,10	0/0:21,0:21:63.20:0,63,2640	0/0:22,0:22:66.23:0,66,2717	1/1:14,0:14:11.18:538,11,0	0/0:37,0:37:99:0,111,4846	0/1:20,0:20:99:364,0,119	0/0:15,0:15:42.13:0,42,1581	0/0:6,0:6:18.06:0,18,646	0/0:43,0:43:99:0,126,5537	1/1:8,0:8:18.06:297,18,0	0/1:8,0:8:52.30:90,0,52	0/1:23,0:23:42.12:235,0,42	1/1:10,0:10:21.07:358,21,0	0/1:14,10:24:40.59:41,0,1581	0/0:18,0:18:54.17:0,54,2273	0/0:5,0:5:15.05:0,15,606
chr10	91463667	.	A	AG	8258.09	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-12.384;DP=517;FS=3.222;HRun=6;HaplotypeScore=64.6574;InbreedingCoeff=0.9641;MQ=82.26;MQ0=0;MQRankSum=-1.164;QD=27.16;ReadPosRankSum=2.101;VQSLOD=5.5719;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,26:32:66.21:825,66,0	1/1:0,5:5:3.01:38,3,0	0/0:21,0:21:53.09:0,53,459	0/0:18,0:16:29.48:0,29,318	1/1:4,17:21:45.08:546,45,0	0/0:19,0:18:51.11:0,51,518	0/0:26,0:26:66.14:0,66,673	1/1:6,17:23:48.11:586,48,0	1/1:2,23:25:63.66:782,64,0	0/0:15,0:15:33.07:0,33,336	0/0:6,0:6:15.03:0,15,153	1/1:4,22:26:45.14:566,45,0	0/0:13,0:13:29.27:0,29,278	1/1:2,21:23:51.15:630,51,0	1/1:4,18:22:36.12:453,36,0	0/0:19,0:19:48.08:0,48,477	1/1:3,25:28:66.21:830,66,0	0/0:18,0:18:51.10:0,51,512	1/1:1,16:17:51.13:603,51,0	1/1:2,11:13:26.97:290,27,0	1/1:4,25:29:72.23:897,72,0	0/0:14,0:14:39.07:0,39,390	0/0:7,0:7:9.02:0,9,92	0/0:25,0:25:51.08:0,51,510	0/0:12,0:12:24.05:0,24,244	1/1:2,17:19:51.12:608,51,0	1/1:3,11:14:30.10:377,30,0	1/1:0,7:7:18.06:226,18,0
chr10	91467783	.	AACTC	A	10646.88	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=2.819;DP=622;FS=12.682;HRun=0;HaplotypeScore=125.0383;InbreedingCoeff=0.9986;MQ=86.59;MQ0=0;MQRankSum=-5.115;QD=48.18;ReadPosRankSum=3.652;VQSLOD=5.3200;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,157,4246	0/0:10,0:10:24.08:0,24,642	0/0:29,0:29:79.26:0,79,2106	0/0:17,0:17:51.17:0,51,1296	0/0:15,0:15:42.13:0,42,1056	1/1:0,24:24:60.20:1141,60,0	1/1:4,32:36:90.31:1745,90,0	0/0:16,0:16:45.15:0,45,1198	0/0:17,0:17:51.15:0,51,1298	1/1:0,18:18:54.17:1014,54,0	1/1:0,13:13:36.12:676,36,0	0/0:30,0:30:90.31:0,90,2427	1/1:1,11:12:24.08:465,24,0	0/0:22,0:22:63.22:0,63,1726	0/0:28,0:28:75.26:0,75,2054	1/1:1,31:32:90.31:1723,90,0	0/0:45,0:45:99:0,132,3480	1/1:0,19:19:48.13:893,48,0	0/0:21,0:21:63.22:0,63,1661	0/0:10,0:10:30.10:0,30,822	0/0:34,0:34:93.32:0,93,2535	1/1:0,14:14:30.10:581,30,0	1/1:0,10:10:21.07:407,21,0	1/1:2,29:31:71.97:1362,72,0	1/1:1,11:11:33.11:640,33,0	0/0:18,0:18:54.19:0,54,1469	0/0:23,0:23:66.20:0,66,1654	0/0:13,0:13:39.13:0,39,1029
chr10	91468525	.	C	CTT	4889.33	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-3.596;DP=529;FS=4.417;HRun=12;HaplotypeScore=82.6109;InbreedingCoeff=0.9529;MQ=59.64;MQ0=5;MQRankSum=-0.429;QD=24.33;ReadPosRankSum=-2.106;VQSLOD=4.3254;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:30:60.79:0,61,589	0/0:7,0:7:18.01:0,18,167	0/0:5,0:4:5.84:0,6,40	0/0:10,0:7:2.99:0,3,26	0/0:29,0:29:48.11:0,48,467	1/1:10,13:24:53.10:624,53,0	1/1:1,15:17:35.61:471,36,0	0/0:26,0:25:56.69:0,57,505	0/0:18,0:17:26.59:0,27,249	1/1:11,16:29:56.09:671,56,0	1/1:5,12:20:32.02:355,32,0	0/0:17,0:17:19.72:0,20,187	1/1:9,10:19:39.01:481,39,0	0/0:14,0:14:23.94:0,24,222	0/0:25,0:25:53.96:0,54,499	1/1:2,18:20:45.10:608,45,0	0/0:30,0:31:53.10:0,53,443	1/1:5,10:15:38.53:451,39,0	0/0:19,0:21:26.80:0,27,297	0/0:15,0:16:29.68:0,30,262	0/0:16,0:18:20.73:0,21,241	1/1:2,7:9:21.07:294,21,0	1/1:4,6:10:15.05:210,15,0	1/1:6,6:12:19.88:256,20,0	1/1:9,15:25:38.97:466,39,0	0/0:19,0:19:44.98:0,45,415	0/0:24,0:23:47.34:0,47,466	0/0:14,0:15:32.85:0,33,352
chr10	91470255	.	TTTG	T	468.42	PASS	AB=0.995;AC=15;AF=0.268;AN=56;BaseQRankSum=4.054;DP=673;FS=0.000;HRun=0;HaplotypeScore=127.5652;InbreedingCoeff=-0.0105;MQ=78.77;MQ0=0;MQRankSum=0.285;QD=1.50;ReadPosRankSum=-3.211;VQSLOD=1.4951;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:12.74:13,0,420	0/0:10,0:10:14.40:0,14,222	0/0:19,0:19:39.05:0,39,514	0/0:24,0:22:8.53:0,9,569	0/0:27,0:27:81.19:0,81,1530	0/1:26,0:26:24.26:25,0,24	0/1:18,1:19:8.39:45,0,8	0/0:37,0:35:99:0,99,1765	0/0:23,0:23:66.20:0,66,1304	0/1:27,0:27:29.74:85,0,30	0/1:18,0:18:26.37:26,0,69	0/0:21,0:21:63.21:0,63,1217	0/1:16,0:16:12.99:13,0,95	0/0:25,0:25:75.23:0,75,1486	0/1:38,0:38:99:126,0,394	0/1:27,0:27:45.35:45,0,87	0/0:19,0:19:20.30:0,20,330	1/1:16,3:19:7.93:129,8,0	0/0:25,0:25:71.55:0,72,1193	0/0:19,0:19:57.18:0,57,1090	0/0:27,0:27:75.15:0,75,1357	0/1:24,0:24:54.92:55,0,82	1/1:25,0:25:2.93:46,3,0	0/1:21,0:20:7.77:8,0,38	0/1:22,0:22:4.92:11,0,5	0/0:36,0:36:99:0,99,1837	0/0:38,0:38:99:0,108,1967	0/0:10,0:10:30.10:0,30,610
chr10	91470256	.	TTG	T	2920.40	PASS	AB=0.958;AC=24;AF=0.429;AN=56;BaseQRankSum=12.302;DP=664;FS=0.316;HRun=0;HaplotypeScore=104.9940;InbreedingCoeff=0.5901;MQ=76.63;MQ0=0;MQRankSum=-0.446;QD=8.61;ReadPosRankSum=-0.984;VQSLOD=3.2587;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,1:32:99:179,0,119	0/1:9,1:10:18.49:18,0,82	0/0:16,0:16:38.39:0,38,405	0/0:23,0:21:32.75:0,33,492	0/0:27,0:27:81.19:0,81,1236	1/1:23,3:26:29.31:249,29,0	1/1:19,0:19:36.07:186,36,0	0/0:38,0:36:96.99:0,97,1404	0/0:23,0:23:66.20:0,66,1047	1/1:26,2:28:62.76:463,63,0	1/1:18,0:18:9.94:177,10,0	0/0:21,0:21:63.13:0,63,949	0/1:15,0:15:1.40:124,0,1	0/0:25,0:25:75.23:0,75,1192	0/1:36,0:36:89.69:251,0,90	0/1:23,4:27:11.10:301,0,11	0/1:19,0:19:60.43:60,0,105	1/1:16,2:18:43.42:309,43,0	0/0:25,0:25:71.53:0,72,969	0/0:19,0:19:57.17:0,57,868	0/0:26,0:26:75.07:0,75,1082	1/1:23,0:23:14:215,14,0	1/1:23,2:25:39.87:261,40,0	1/1:19,1:19:19.21:159,19,0	1/1:22,1:23:30.98:178,31,0	0/0:34,0:34:99:0,99,1458	0/0:38,0:38:99:0,108,1588	0/0:10,0:10:30.10:0,30,488
chr10	91470257	.	TG	T	7276.48	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=10.707;DP=666;FS=1.373;HRun=1;HaplotypeScore=80.5458;InbreedingCoeff=0.9927;MQ=75.97;MQ0=0;MQRankSum=0.324;QD=21.66;ReadPosRankSum=-1.309;VQSLOD=4.5838;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,2:32:60.20:455,60,0	1/1:11,0:11:16.38:79,16,0	0/0:15,0:15:30.10:0,30,284	0/0:23,0:21:14.07:0,14,372	0/0:28,0:28:81.13:0,81,970	1/1:4,22:26:42.54:529,43,0	1/1:2,17:19:39.05:500,39,0	0/0:37,0:35:99:0,103,1140	0/0:22,0:22:66.19:0,66,814	1/1:2,26:28:79.92:929,80,0	1/1:2,16:18:41.08:454,41,0	0/0:22,0:22:59:0,59,732	1/1:9,6:15:37.13:409,37,0	0/0:27,0:27:81.20:0,81,975	1/1:32,3:35:75.21:638,75,0	1/1:6,19:25:14.18:539,14,0	1/1:18,2:20:30.88:245,31,0	1/1:5,13:18:45.08:552,45,0	0/0:25,0:25:74.33:0,74,787	0/0:19,0:19:57.04:0,57,662	0/0:27,0:27:77.86:0,78,870	1/1:3,19:22:52.48:558,52,0	1/1:2,23:25:42.06:526,42,0	1/1:2,18:20:33.56:427,34,0	1/1:1,21:22:33.10:436,33,0	0/0:35,0:35:97.10:0,97,1133	0/0:39,0:39:99:0,107,1266	0/0:11,0:11:30.06:0,30,377
chr10	91472740	.	GTT	G	5630.76	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.821;DP=440;FS=2.808;HRun=5;HaplotypeScore=57.8559;InbreedingCoeff=0.7070;MQ=67.96;MQ0=40;MQRankSum=-2.703;QD=14.51;ReadPosRankSum=3.030;VQSLOD=0.8325;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:47.73:374,48,0	1/1:10,0:9:23.95:195,24,0	0/0:26,0:14:39.07:0,39,403	0/0:26,0:14:26.28:0,26,306	1/1:19,0:18:38.76:295,39,0	1/1:17,0:15:33.74:275,34,0	1/1:12,0:11:29.70:219,30,0	1/1:23,0:21:56.94:495,57,0	1/1:10,0:8:17.97:158,18,0	1/1:7,7:13:35.96:306,36,0	1/1:11,0:10:20.59:148,21,0	1/1:20,0:17:2.86:25,3,0	1/1:9,0:8:8.97:70,9,0	1/1:17,0:16:44.83:357,45,0	1/1:15,0:14:35.94:295,36,0	1/1:20,0:18:8.99:74,9,0	1/1:23,0:16:41.38:333,41,0	1/1:14,0:11:3:25,3,0	1/1:7,0:7:17.97:153,18,0	1/1:13,0:13:31.36:235,31,0	1/1:13,0:13:35.94:293,36,0	1/1:15,0:14:32.05:238,32,0	1/1:7,0:7:2.86:24,3,0	1/1:26,0:25:0.47:1,0,0	1/1:11,0:11:29.97:249,30,0	1/1:12,0:12:35.91:305,36,0	1/1:8,0:6:17.91:136,18,0	1/1:21,0:15:44.86:353,45,0
chr10	91472742	.	TTTTCTCTCTCTCTCTC	T	5759	PASS	AB=0.979;AC=41;AF=0.732;AN=56;BaseQRankSum=-4.578;DP=454;FS=16.397;HRun=0;HaplotypeScore=142.8200;InbreedingCoeff=0.0581;MQ=66.63;MQ0=44;MQRankSum=0.317;QD=15.16;ReadPosRankSum=-0.437;VQSLOD=2.6203;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:22:99:184,0,147	1/1:9,0:8:7.42:154,7,0	0/0:26,0:14:39.07:0,39,403	0/0:25,0:13:26.32:0,26,336	0/1:16,0:20:31.93:208,0,32	1/1:13,1:13:34.68:491,35,0	1/1:12,0:11:29.81:257,30,0	1/1:26,0:24:2.98:417,3,0	0/1:9,0:7:27.82:28,0,356	0/1:15,0:14:56.91:267,0,57	1/1:9,2:9:20.66:375,21,0	0/0:4,0:20:2.79:0,3,37	1/1:4,8:11:7.67:301,8,0	0/1:19,0:17:82.63:241,0,83	1/1:14,0:13:35.94:295,36,0	1/1:2,17:18:11.79:425,12,0	0/1:23,0:16:51.77:217,0,52	1/1:5,10:11:2.56:141,3,0	1/1:7,0:7:17.97:153,18,0	1/1:13,0:13:27.56:215,28,0	1/1:13,0:12:33.83:272,34,0	1/1:14,0:13:32.06:277,32,0	1/1:0,7:7:2.63:140,3,0	1/1:4,21:24:0.47:1,0,0	1/1:11,0:11:10.94:204,11,0	0/1:13,0:13:99:166,0,175	0/1:8,0:6:31.07:95,0,31	0/1:24,0:18:99:236,0,107
chr10	91472963	.	AAG	A	348.84	PASS	AB=0.983;AC=14;AF=0.292;AN=48;BaseQRankSum=0.370;DP=478;FS=8.464;HRun=0;HaplotypeScore=71.8831;InbreedingCoeff=0.1716;MQ=67.30;MQ0=10;MQRankSum=1.391;QD=1.71;ReadPosRankSum=0.453;VQSLOD=0.2125;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:9:0,9,86	0/0:12,0:12:1.03:0,1,3	./.	0/1:40,0:16:0.21:0,0,0	0/0:20,0:19:5.97:0,6,47	0/0:14,0:14:8.97:0,9,95	1/1:11,7:18:4.82:37,5,0	0/0:30,0:26:8.76:0,9,52	0/0:16,0:16:5.02:0,5,29	0/1:20,0:20:10.79:11,0,71	./.	./.	1/1:9,1:10:4.33:54,4,0	0/0:13,0:12:2.99:0,3,23	0/1:10,0:10:0.01:0,0,0	1/1:27,2:27:31.80:244,32,0	0/1:24,0:24:0:1,0,0	0/1:10,0:10:3.99:4,0,185	./.	0/0:16,0:16:8.78:0,9,58	0/0:16,0:16:5.98:0,6,61	0/1:11,1:12:15.99:33,0,16	0/1:14,0:14:34.31:34,0,112	0/1:15,1:15:57.66:60,0,58	0/0:10,0:10:2.22:0,2,91	0/0:18,0:18:7.79:0,8,63	0/0:6,0:6:6.01:0,6,65	0/0:5,0:5:4.21:0,4,23
chr10	91474406	.	AAC	A	767.44	PASS	AB=0.921;AC=31;AF=0.738;AN=42;BaseQRankSum=0.244;DP=587;FS=7.325;HRun=0;HaplotypeScore=86.9747;InbreedingCoeff=0.1848;MQ=71.89;MQ0=11;MQRankSum=1.138;QD=2.38;ReadPosRankSum=-1.274;VQSLOD=1.1061;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:37:5.06:5,0,74	0/0:10,0:10:2.99:0,3,24	./.	./.	1/1:8,1:10:3:32,3,0	0/0:11,0:11:0:0,0,0	1/1:28,3:31:6.01:64,6,0	0/0:24,0:23:1.25:0,1,3	./.	./.	1/1:9,3:12:6.01:64,6,0	1/1:18,1:19:3.01:32,3,0	1/1:14,0:15:2.84:14,3,0	./.	0/0:18,0:18:0:0,0,0	1/1:20,0:21:5.83:39,6,0	0/1:34,1:35:10.84:11,0,188	1/1:15,2:17:5.98:64,6,0	./.	1/1:10,2:13:5.85:46,6,0	./.	0/1:14,4:18:8.25:8,0,16	1/1:8,0:9:8.69:60,9,0	1/1:23,3:27:12.02:121,12,0	1/1:7,3:10:9.02:96,9,0	1/1:16,3:18:5.97:64,6,0	1/1:15,3:18:6.01:64,6,0	1/1:7,5:12:9.02:96,9,0
chr10	91474757	.	A	AGTTG	7296.60	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-12.760;DP=580;FS=2.462;HRun=0;HaplotypeScore=94.6101;InbreedingCoeff=0.9940;MQ=85.45;MQ0=0;MQRankSum=-1.239;QD=68.84;ReadPosRankSum=3.699;VQSLOD=7.1754;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,39:43:99:2950,114,0	1/1:2,8:10:27.09:707,27,0	0/0:21,0:21:57.17:0,57,970	0/0:17,0:17:41.69:0,42,594	0/0:17,0:17:48.16:0,48,870	0/0:15,0:15:39.13:0,39,691	0/0:20,0:20:48.15:0,48,844	0/0:21,0:21:60.18:0,60,990	0/0:20,0:20:60.21:0,60,1104	0/0:16,0:16:45.15:0,45,828	0/0:17,0:17:45.14:0,45,785	0/0:18,0:18:51.14:0,51,877	0/0:24,0:24:72.25:0,72,1325	0/0:16,0:16:48.16:0,48,869	1/1:1,19:21:51.18:1345,51,0	0/0:16,0:16:48.16:0,48,883	1/1:3,29:32:87.30:2295,87,0	0/0:23,0:23:63.22:0,63,1159	0/0:29,0:29:81.26:0,81,1440	0/0:5,0:5:15.04:0,15,245	0/0:58,0:58:99:0,156,2763	0/0:16,0:16:39.04:0,39,624	0/0:7,0:7:21.07:0,21,386	0/0:29,0:29:84.29:0,84,1546	0/0:11,0:11:33.11:0,33,581	0/0:24,0:24:66.22:0,66,1165	0/0:19,0:19:51.17:0,51,932	0/0:15,0:15:45.15:0,45,828
chr10	91475274	.	TCCCCTGTCCTGG	T	18637.57	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.599;DP=684;FS=10.047;HRun=0;HaplotypeScore=250.2573;InbreedingCoeff=0.9832;MQ=84.89;MQ0=0;MQRankSum=-18.267;QD=84.72;ReadPosRankSum=3.749;VQSLOD=3.2107;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,5702	0/0:6,0:6:18.06:0,18,996	0/0:30,0:30:90.31:0,90,4260	0/0:25,0:25:63.03:0,63,2721	0/0:19,0:19:54.17:0,54,3060	1/1:0,22:22:48.16:1858,48,0	1/1:0,22:22:48.16:1884,48,0	0/0:31,0:31:93.31:0,93,5170	0/0:28,0:28:81.28:0,81,5066	1/1:0,22:22:63.20:2361,63,0	1/1:0,7:7:6.02:237,6,0	0/0:32,0:32:96.32:0,96,5365	1/1:0,18:18:51.18:2006,51,0	0/0:31,0:31:93.31:0,93,5419	0/0:39,0:39:99:0,117,5833	1/1:0,31:31:75.26:2956,75,0	0/0:35,0:35:99:0,105,5485	1/1:0,14:14:21.07:831,21,0	0/0:33,0:33:99:0,99,5221	0/0:18,0:18:51.18:0,51,3203	0/0:35,0:35:99:0,105,6345	1/1:0,19:19:45.15:1742,45,0	1/1:0,16:16:36.59:1380,37,0	1/1:0,27:27:35.96:1367,36,0	1/1:0,22:22:54.19:2016,54,0	0/0:22,0:22:66.17:0,66,3619	0/0:27,0:27:78.24:0,78,4479	0/0:14,0:14:42.09:0,42,1793
chr10	91475801	.	T	TG	480.52	PASS	AB=0.750;AC=18;AF=0.321;AN=56;BaseQRankSum=-5.163;DP=465;FS=7.691;HRun=10;HaplotypeScore=79.9587;InbreedingCoeff=0.6495;MQ=70.58;MQ0=1;MQRankSum=-1.589;QD=4.90;ReadPosRankSum=-4.717;VQSLOD=0.0472;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:26:14.26:0,14,298	0/0:10,0:10:20.95:0,21,169	0/0:24,0:20:20.69:0,21,157	0/0:16,0:13:4.07:0,4,71	0/0:15,0:15:26.88:0,27,222	0/1:4,4:8:2.06:26,0,2	1/1:13,5:18:20.31:174,20,0	0/0:22,0:22:41.84:0,42,342	0/0:19,0:19:47.91:0,48,390	0/1:4,1:5:0.85:1,0,20	1/1:6,0:6:3.47:33,3,0	0/0:21,0:21:59.93:0,60,492	1/1:9,2:11:10.54:83,11,0	0/0:23,0:23:53.85:0,54,443	0/0:27,0:28:12.86:0,13,207	1/1:7,9:16:11.64:126,12,0	0/0:24,1:29:20.57:0,21,260	1/1:4,5:9:6.02:64,6,0	0/0:14,0:14:38.94:0,39,319	0/0:18,0:18:35.87:0,36,295	0/0:36,0:36:95.86:0,96,787	0/1:8,2:10:0.72:28,0,1	1/1:5,1:6:3.01:32,3,0	0/1:2,2:4:12.81:26,0,13	1/1:3,2:5:6.90:66,7,0	0/0:19,0:19:41.92:0,42,344	0/0:37,0:35:95.66:0,96,770	0/0:10,0:10:14.98:0,15,123
chr10	91477005	.	TA	T	1023.27	PASS	AB=0.870;AC=9;AF=0.161;AN=56;BaseQRankSum=7.337;DP=583;FS=7.804;HRun=12;HaplotypeScore=67.1582;InbreedingCoeff=0.8972;MQ=73.04;MQ0=0;MQRankSum=-0.618;QD=10.03;ReadPosRankSum=3.898;VQSLOD=2.6940;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:47.79:371,48,0	1/1:4,9:13:19.19:160,19,0	0/0:25,0:22:28.94:0,29,215	0/0:17,1:15:7.81:0,8,154	0/0:33,1:36:71.96:0,72,703	0/0:22,0:22:45.08:0,45,450	0/0:24,0:24:39.92:0,40,552	0/0:28,1:31:48.70:0,49,647	0/0:19,0:19:39.04:0,39,385	0/0:19,0:19:27.05:0,27,274	0/0:15,0:15:27.05:0,27,274	0/0:23,0:23:57.04:0,57,546	0/0:18,0:18:35.71:0,36,353	0/0:13,0:13:30:0,30,283	1/1:5,14:19:26.87:209,27,0	0/0:21,1:22:39.94:0,40,586	1/1:1,24:25:56.78:441,57,0	0/0:24,0:25:55.05:0,55,569	0/0:24,1:25:45.82:0,46,612	0/1:17,3:20:1.39:1,0,346	0/0:22,0:22:54.09:0,54,537	0/0:15,0:15:24.05:0,24,244	0/0:9,0:9:24.04:0,24,239	0/0:19,0:19:51.09:0,51,511	0/0:15,0:15:42.07:0,42,420	0/0:21,1:22:21.83:0,22,388	0/0:28,0:27:77.75:0,78,738	0/0:15,0:15:36.05:0,36,354
chr10	91477271	.	TACAC	T	4394.12	PASS	AB=0.644;AC=20;AF=0.370;AN=54;BaseQRankSum=-1.372;DP=777;FS=2.121;HRun=0;HaplotypeScore=181.2630;InbreedingCoeff=0.7877;MQ=58.14;MQ0=10;MQRankSum=1.614;QD=15.26;ReadPosRankSum=4.336;VQSLOD=4.5670;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:26.41:0,26,444	0/0:9,0:8:12.04:0,12,284	./.	0/0:30,0:17:3.01:0,3,36	0/0:21,0:22:17.71:0,18,330	1/1:12,4:19:17.25:253,17,0	1/1:17,15:34:11.30:735,11,0	0/0:40,0:40:33.98:0,34,614	0/0:15,0:27:24.05:0,24,381	1/1:15,5:22:18.05:245,18,0	1/1:9,7:17:9.03:142,9,0	0/0:20,0:37:38.62:0,39,656	1/1:14,10:26:36.10:513,36,0	0/0:14,0:24:21.54:0,22,409	0/0:28,0:30:47.90:0,48,1054	0/1:10,23:37:19.56:855,0,20	0/0:33,0:38:83.20:0,83,1599	1/1:10,11:21:10.29:361,10,0	0/0:22,0:22:22.86:0,23,281	0/0:14,0:23:17.09:0,17,268	0/0:17,0:39:27.05:0,27,425	0/1:16,10:28:0.62:127,0,1	1/1:10,3:13:3.45:48,3,0	1/1:21,16:37:35.86:564,36,0	1/1:17,15:32:36.12:551,36,0	0/0:20,0:34:62.35:0,62,1014	0/0:22,0:32:33.58:0,34,598	0/0:8,0:14:9.03:0,9,157
chr10	91477898	.	CAAA	C	1714.23	PASS	AB=0.571;AC=7;AF=0.125;AN=56;BaseQRankSum=7.198;DP=560;FS=2.483;HRun=14;HaplotypeScore=84.6546;InbreedingCoeff=0.8333;MQ=76.67;MQ0=1;MQRankSum=0.047;QD=22.26;ReadPosRankSum=6.642;VQSLOD=2.8199;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:50.24:595,50,0	1/1:2,7:9:18.03:210,18,0	0/0:24,0:18:14.56:0,15,391	0/0:17,0:14:13.73:0,14,178	0/0:28,0:31:63.19:0,63,1039	0/0:23,0:27:60.20:0,60,1065	0/0:18,0:18:42.13:0,42,745	0/0:26,0:28:60.17:0,60,1015	0/0:13,0:17:33.11:0,33,576	0/0:18,0:21:51.14:0,51,817	0/0:12,0:12:27.08:0,27,463	0/0:12,0:14:33.09:0,33,570	0/0:20,0:20:51.13:0,51,866	0/0:11,0:12:27.07:0,27,460	0/1:5,15:20:11.36:446,0,11	0/0:28,0:27:54.17:0,54,927	1/1:4,18:23:52.64:611,53,0	0/0:8,0:9:25.33:0,25,431	0/0:26,0:28:57.17:0,57,968	0/0:21,0:23:54.17:0,54,912	0/0:21,0:21:54.18:0,54,977	0/0:10,0:14:23.99:0,24,334	0/0:13,0:14:33.08:0,33,496	0/0:12,0:14:33.09:0,33,584	0/0:25,0:29:69.21:0,69,1166	0/0:19,0:20:36.12:0,36,623	0/0:27,0:30:78.21:0,78,1344	0/0:9,0:9:24.08:0,24,452
chr10	91480050	.	T	TGCGC	2043.61	PASS	AB=0.596;AC=28;AF=0.519;AN=54;BaseQRankSum=0.118;DP=235;FS=4.730;HRun=0;HaplotypeScore=46.0956;InbreedingCoeff=0.6138;MQ=64.80;MQ0=2;MQRankSum=-0.334;QD=17.62;ReadPosRankSum=0.902;VQSLOD=2.5204;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:5.99:48,6,0	1/1:3,0:3:2.88:15,3,0	1/1:9,0:3:3.21:13,3,0	0/0:10,0:6:3.01:0,3,30	0/0:13,0:13:36.12:0,36,622	1/1:0,2:2:3.01:77,3,0	1/1:0,4:5:9.03:229,9,0	0/0:10,0:10:24.06:0,24,323	0/0:3,0:3:6.02:0,6,101	1/1:1,5:6:8.98:160,9,0	1/1:2,4:6:3.01:77,3,0	0/0:4,0:4:6.02:0,6,96	1/1:0,2:2:3.01:77,3,0	0/0:8,0:8:21.06:0,21,317	1/1:3,0:3:2.99:24,3,0	1/1:1,4:5:6.02:153,6,0	1/1:16,0:16:3.82:151,4,0	1/1:2,16:19:30.10:765,30,0	0/0:11,0:11:27.08:0,27,431	0/0:8,0:8:21.07:0,21,358	0/0:14,0:14:33.06:0,33,479	./.	0/1:0,6:6:0:0,0,0	1/1:3,4:7:6.02:153,6,0	0/1:5,4:9:34.87:283,0,35	0/0:13,0:13:39.09:0,39,628	0/0:11,0:11:27.07:0,27,421	0/0:12,0:10:29.93:0,30,487
chr10	91480059	.	G	GCGCACACACACACACA	1320.99	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=-0.379;DP=265;FS=4.474;HRun=0;HaplotypeScore=105.5955;InbreedingCoeff=0.4554;MQ=67.20;MQ0=1;MQRankSum=-3.693;QD=50.81;ReadPosRankSum=-0.883;VQSLOD=2.8889;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,0:3:2.97:20,3,0	0/0:9,0:6:2.19:0,2,119	0/0:7,0:6:2.84:0,3,14	0/0:14,0:14:36.10:0,36,1524	0/0:3,0:3:6.02:0,6,115	0/0:7,0:7:14.26:0,14,229	0/0:17,0:17:39.09:0,39,1084	0/0:4,0:4:9.02:0,9,152	0/0:8,0:8:2.04:0,2,193	0/0:5,0:5:6.02:0,6,93	0/0:4,0:4:9.03:0,9,393	0/0:3,0:3:2.99:0,3,23	0/0:12,0:12:33.06:0,33,1052	./.	0/0:5,0:5:9.03:0,9,153	1/1:4,14:23:24.08:1405,24,0	0/0:18,0:18:30.95:0,31,513	0/0:12,0:12:36.10:0,36,1172	0/0:10,0:10:30.05:0,30,927	0/0:13,0:13:39.10:0,39,1343	0/0:5,0:5:5.95:0,6,42	0/0:8,0:8:5.61:0,6,89	0/0:6,0:6:9.03:0,9,192	0/0:8,0:8:21.06:0,21,530	0/0:13,0:13:39.13:0,39,1661	0/0:12,0:12:35.96:0,36,1252	0/0:12,0:10:29.13:0,29,1058
chr10	91484012	.	C	CA	5701.70	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-11.900;DP=604;FS=4.592;HRun=10;HaplotypeScore=69.6623;InbreedingCoeff=0.9936;MQ=75.20;MQ0=0;MQRankSum=-1.625;QD=22.01;ReadPosRankSum=-2.723;VQSLOD=4.8418;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:53.91:0,54,443	0/0:11,0:11:26.22:0,26,216	0/0:18,0:19:31.67:0,32,246	0/0:13,0:13:23.90:0,24,189	1/1:6,24:31:72.37:714,72,0	0/0:28,0:28:62.02:0,62,515	0/0:16,0:16:41.92:0,42,342	1/1:7,22:29:66.17:704,66,0	1/1:2,19:21:48.12:512,48,0	0/0:25,0:28:72.96:0,73,574	0/0:25,0:26:67.92:0,68,543	1/1:3,13:16:24.05:249,24,0	0/0:16,0:16:47.92:0,48,390	1/1:2,11:13:30.08:320,30,0	0/0:22,0:23:58.96:0,59,474	0/0:21,1:22:24.95:0,25,411	0/0:22,0:22:41.89:0,42,345	0/0:15,0:15:32.94:0,33,268	1/1:7,13:21:20.27:390,20,0	1/1:6,25:33:79.91:753,80,0	1/1:1,13:14:39.08:407,39,0	0/0:23,0:23:58.35:0,58,490	0/0:25,0:25:53.90:0,54,443	0/0:21,0:23:58:0,58,455	0/0:13,0:13:32.95:0,33,271	1/1:8,34:43:40.04:853,40,0	1/1:4,26:30:63.16:672,63,0	1/1:4,4:8:12.03:128,12,0
chr10	91485907	.	AAGCAAATCCTCG	A	3742.40	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=10.925;DP=392;FS=9.990;HRun=0;HaplotypeScore=159.4754;InbreedingCoeff=0.8797;MQ=77.78;MQ0=10;MQRankSum=-9.130;QD=61.35;ReadPosRankSum=4.094;VQSLOD=2.7803;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:72.19:0,72,3963	0/0:4,0:3:6.02:0,6,265	0/0:27,0:13:38.96:0,39,1771	0/0:33,0:23:6.17:0,6,1297	0/0:17,0:16:33.09:0,33,1467	1/1:0,6:5:12.04:262,12,0	1/1:0,5:5:15.05:311,15,0	0/0:25,0:25:52.54:0,53,2175	0/0:8,0:8:4.61:0,5,517	1/1:0,4:3:9.03:330,9,0	1/1:0,3:3:9.03:237,9,0	0/0:16,0:15:24.80:0,25,1071	1/1:0,6:6:18.06:473,18,0	0/0:15,0:15:24.08:0,24,1159	0/0:18,0:18:48.16:0,48,2552	1/1:0,9:9:27.09:607,27,0	0/0:28,0:28:71.38:0,71,3226	1/1:0,7:7:21.07:706,21,0	0/0:24,0:24:69.18:0,69,3709	0/0:18,0:17:39.07:0,39,1663	0/0:16,0:15:24.08:0,24,1180	1/1:0,6:3:6.02:90,6,0	1/1:0,4:4:12.04:270,12,0	1/1:0,4:4:3.01:51,3,0	1/1:0,7:7:21.07:406,21,0	0/0:17,1:17:45.15:0,45,2495	0/0:16,0:16:34:0,34,1799	0/0:18,0:18:48.16:0,48,2623
chr10	91485979	.	G	GTGTGTGTGTC	1684.86	PASS	AB=0.900;AC=6;AF=0.107;AN=56;BaseQRankSum=4.877;DP=838;FS=6.782;HRun=0;HaplotypeScore=269.2446;InbreedingCoeff=0.1912;MQ=42.54;MQ0=58;MQRankSum=-5.246;QD=14.91;ReadPosRankSum=-2.240;VQSLOD=1.4926;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,1:24:99:269,0,113	1/1:4,1:5:6.02:223,6,0	0/0:42,0:10:19.77:0,20,330	0/0:55,0:20:37.41:0,37,694	0/0:32,0:30:66.18:0,66,1954	0/0:23,0:18:33.11:0,33,983	0/0:20,0:19:29.95:0,30,824	0/0:41,0:34:90.14:0,90,2114	0/0:21,0:20:51.15:0,51,1454	0/0:50,0:43:60.51:0,61,2345	0/0:29,0:27:39.13:0,39,1205	0/0:28,0:28:72.18:0,72,2015	0/0:28,0:24:63.17:0,63,1844	0/0:21,0:20:51.16:0,51,1431	0/1:25,7:25:61.83:1094,0,62	0/0:28,0:23:48.16:0,48,1505	0/1:18,2:16:99:178,0,165	0/1:16,0:15:44.33:44,0,916	0/0:31,0:27:62.31:0,62,1502	0/0:19,0:18:48.15:0,48,1430	0/0:48,0:45:68.67:0,69,2799	0/0:32,0:30:38.85:0,39,1070	0/0:22,0:19:27.98:0,28,701	0/0:31,0:25:36.59:0,37,1085	0/0:26,0:23:51.17:0,51,1536	0/0:38,0:38:99:0,108,3012	0/0:26,0:25:69.18:0,69,1997	0/0:32,0:32:96.33:0,96,3144
chr10	91486053	.	G	GTCTC	9722.46	PASS	AB=0.906;AC=45;AF=0.833;AN=54;BaseQRankSum=-1.739;DP=661;FS=15.809;HRun=0;HaplotypeScore=187.0066;InbreedingCoeff=0.3618;MQ=50.26;MQ0=41;MQRankSum=0.687;QD=17.33;ReadPosRankSum=1.954;VQSLOD=3.2563;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:11:0.88:2,1,0	./.	0/0:41,0:17:15.23:0,15,239	0/0:55,0:23:3.67:0,4,239	0/1:12,3:15:8.32:219,0,8	1/1:16,5:18:4.65:141,5,0	1/1:18,5:16:21.02:442,21,0	1/1:35,0:29:6.46:411,6,0	1/1:21,5:24:38.87:784,39,0	1/1:33,10:36:69.23:1370,69,0	1/1:17,3:18:2.83:36,3,0	1/1:14,10:24:42.07:752,42,0	1/1:17,4:19:21.07:456,21,0	0/1:15,7:20:19.81:468,0,20	0/1:10,0:7:1.69:2,0,8	1/1:23,6:27:17.42:468,17,0	0/1:7,0:4:0.01:0,0,0	1/1:15,2:15:27.56:555,28,0	1/1:17,3:18:30.26:496,30,0	1/1:10,8:17:13.38:367,13,0	1/1:22,4:25:14.51:295,15,0	1/1:20,8:27:14.60:270,15,0	1/1:17,4:26:17.69:227,18,0	1/1:22,0:21:5.86:122,6,0	1/1:9,7:17:21.04:360,21,0	1/1:34,5:36:69.44:1192,69,0	1/1:10,3:12:15.02:222,15,0	0/1:11,0:11:11.55:68,0,12
chr10	91486071	.	CTG	C	1417.85	PASS	AB=0.932;AC=24;AF=0.444;AN=54;BaseQRankSum=-0.795;DP=686;FS=14.777;HRun=0;HaplotypeScore=214.2055;InbreedingCoeff=-0.3079;MQ=48.63;MQ0=34;MQRankSum=-1.713;QD=3.04;ReadPosRankSum=0.622;VQSLOD=1.5908;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:10:2.96:19,3,0	./.	0/0:37,0:14:17.65:0,18,257	0/0:59,0:21:27.68:0,28,243	0/1:19,0:17:17.17:17,0,125	0/1:19,2:15:32.30:61,0,32	0/1:22,6:25:71.14:104,0,71	0/1:32,5:28:99:162,0,252	0/1:25,1:26:99:152,0,153	0/1:40,5:40:99:233,0,392	0/0:16,1:15:13.43:0,13,93	0/1:27,1:27:30.73:31,0,276	0/1:19,3:20:69.17:105,0,69	0/1:20,1:18:59.66:60,0,207	1/1:8,0:8:5.52:30,6,0	0/1:32,0:29:70.07:70,0,260	1/1:4,0:5:5.46:29,5,0	0/1:17,1:16:48.04:148,0,48	0/0:25,1:21:10.15:0,10,313	0/1:19,1:19:29.83:30,0,94	0/1:35,0:35:43.64:44,0,87	0/1:22,1:22:21.95:22,0,57	0/0:32,0:30:30.41:0,30,210	0/0:28,0:23:18.34:0,18,112	0/0:13,0:13:11.84:0,12,135	0/1:34,2:34:99:202,0,332	0/1:12,0:12:43.35:43,0,70	1/1:7,1:6:3.38:20,3,0
chr10	91486075	.	GTC	G	1061.25	PASS	AB=0.944;AC=22;AF=0.407;AN=54;BaseQRankSum=-2.954;DP=680;FS=2.723;HRun=0;HaplotypeScore=217.6663;InbreedingCoeff=-0.4300;MQ=46.72;MQ0=28;MQRankSum=-3.023;QD=2.21;ReadPosRankSum=-2.184;VQSLOD=2.1929;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:14:3.84:0,4,21	./.	0/0:32,0:11:23.89:0,24,250	0/0:59,0:19:19.75:0,20,233	0/0:19,0:17:4.55:0,5,91	1/1:19,0:15:1.59:41,2,0	0/1:30,0:28:12.05:79,0,12	0/1:23,12:27:99:297,0,296	0/1:25,4:27:86.77:122,0,87	0/1:45,1:43:61.20:61,0,249	0/1:17,0:15:4.72:5,0,17	0/0:27,0:26:32.14:0,32,265	0/1:21,0:20:32.78:46,0,33	0/1:20,2:19:32.65:33,0,149	0/0:12,0:12:4.67:0,5,28	0/1:31,0:29:10.07:10,0,124	1/1:6,0:5:0.89:2,1,0	0/1:17,0:16:8.62:38,0,9	0/1:24,0:20:38.54:39,0,285	0/0:22,0:20:18.52:0,19,155	0/1:30,4:32:99:112,0,101	0/1:20,0:19:11.79:18,0,12	0/1:30,0:29:5.10:5,0,49	0/1:27,0:23:3.58:4,0,33	0/1:13,0:13:10.40:10,0,16	0/1:38,0:34:99:153,0,249	0/1:12,1:13:68.27:75,0,68	0/1:4,5:7:28.50:56,0,28
chr10	91486077	.	C	CTGTG	5032.26	PASS	AB=1.000;AC=31;AF=0.574;AN=54;BaseQRankSum=-4.805;DP=694;FS=19.458;HRun=0;HaplotypeScore=223.3894;InbreedingCoeff=0.2636;MQ=46.16;MQ0=30;MQRankSum=-3.024;QD=9.83;ReadPosRankSum=1.969;VQSLOD=2.6122;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:14:8:0,8,59	./.	0/0:30,0:9:2.12:0,2,37	0/0:56,0:17:12.68:0,13,94	1/1:8,10:17:14.08:274,14,0	0/1:18,0:14:4.26:4,0,41	0/1:32,0:30:9.14:9,0,103	1/1:39,0:30:33.65:426,34,0	1/1:23,5:26:38.39:730,38,0	0/1:44,0:43:18.77:19,0,271	0/0:17,0:14:14.67:0,15,119	1/1:10,15:28:26.74:493,27,0	0/1:21,0:20:8.10:8,0,58	1/1:18,3:19:20.75:284,21,0	0/0:12,0:13:4.71:0,5,72	0/0:31,0:29:7.31:0,7,250	0/0:6,0:5:5.95:0,6,56	0/1:18,0:17:13.85:14,0,49	1/1:13,13:21:50.66:676,51,0	1/1:15,8:23:4.34:95,4,0	1/1:30,2:31:28.11:443,28,0	0/1:20,0:19:27.27:27,0,40	0/1:31,0:30:67.87:100,0,68	0/1:29,0:24:7.64:8,0,99	0/1:13,0:13:5.93:6,0,89	1/1:21,17:37:56.64:1024,57,0	1/1:12,0:14:17.73:230,18,0	1/1:9,0:7:9.01:164,9,0
chr10	91486091	.	GTGTGTGTC	G	251.49	PASS	AB=0.954;AC=10;AF=0.179;AN=56;BaseQRankSum=-1.794;DP=767;FS=3.251;HRun=0;HaplotypeScore=269.7634;InbreedingCoeff=-0.2243;MQ=42.29;MQ0=29;MQRankSum=-0.353;QD=1.08;ReadPosRankSum=-4.476;VQSLOD=1.8169;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:25:19.73:20,0,143	0/1:5,8:10:23.98:24,0,59	0/0:30,0:8:23.80:0,24,206	0/0:45,0:11:17.95:0,18,206	0/0:21,0:20:37.36:0,37,559	0/1:18,0:14:23.59:24,0,69	0/0:28,0:27:29.45:0,29,234	0/0:47,0:41:99:0,117,1815	0/0:27,0:24:50.17:0,50,1218	0/0:44,0:43:11.50:0,12,885	0/1:21,0:18:25.72:26,0,189	0/0:32,0:31:40.16:0,40,847	0/0:22,0:20:20.93:0,21,195	0/0:22,0:19:36.11:0,36,862	0/1:21,2:20:59.57:108,0,60	0/1:31,0:29:14:14,0,572	0/1:20,0:18:99:107,0,143	0/1:18,0:16:55.79:56,0,174	0/0:38,0:29:71.79:0,72,1198	0/0:24,0:23:21.56:0,22,230	0/0:35,0:33:42.68:0,43,914	0/1:22,0:21:4.74:5,0,232	0/1:37,0:37:8.01:8,0,419	0/0:34,0:30:2.44:0,2,158	0/0:15,0:15:5.11:0,5,410	0/0:43,0:39:81.04:0,81,1804	0/0:17,0:17:35.99:0,36,614	0/0:11,0:10:23.99:0,24,368
chr10	91486097	.	GTC	G	4579.74	PASS	AB=0.903;AC=25;AF=0.446;AN=56;BaseQRankSum=-2.507;DP=789;FS=22.505;HRun=0;HaplotypeScore=200.9293;InbreedingCoeff=0.5169;MQ=42.16;MQ0=28;MQRankSum=2.157;QD=11.22;ReadPosRankSum=4.074;VQSLOD=2.9542;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,2:29:2.55:3,0,91	0/1:12,1:10:7.07:7,0,29	0/0:29,0:8:23.74:0,24,210	0/0:48,0:10:13.43:0,13,163	0/0:18,0:18:33.98:0,34,244	1/1:11,5:12:11.97:150,12,0	1/1:5,25:30:4.38:345,4,0	0/0:49,0:43:85.14:0,85,905	0/0:26,0:22:51.80:0,52,440	1/1:24,18:38:35.57:1016,36,0	1/1:19,4:20:26.76:289,27,0	0/0:35,0:33:36.41:0,36,321	1/1:4,17:19:17.99:245,18,0	0/0:22,1:20:35.96:0,36,316	0/1:24,2:22:28.04:35,0,28	0/1:23,11:32:22.01:596,0,22	0/1:20,0:18:62.17:62,0,130	0/1:13,6:17:9.96:332,0,10	0/0:36,1:29:30.34:0,30,479	0/0:23,0:23:20.05:0,20,126	0/0:37,1:36:46.20:0,46,353	1/1:13,8:20:22.05:263,22,0	1/1:28,13:39:43.39:521,43,0	1/1:29,10:32:29.08:353,29,0	1/1:9,8:16:5.08:362,5,0	0/0:33,1:31:34.51:0,35,616	0/0:21,0:21:44.43:0,44,332	0/1:11,0:10:1.25:1,0,116
chr10	91486195	.	G	GTC	73.58	PASS	AB=0.800;AC=5;AF=0.093;AN=54;BaseQRankSum=3.189;DP=1448;FS=0.000;HRun=0;HaplotypeScore=267.0883;InbreedingCoeff=0.6598;MQ=37.30;MQ0=295;MQRankSum=-3.846;QD=1.11;ReadPosRankSum=-0.263;VQSLOD=2.0904;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,9:15:0.01:0,0,0	1/1:3,6:6:9:123,9,0	0/0:63,0:3:2.18:0,2,34	0/0:82,0:2:3.01:0,3,39	0/0:54,0:46:42.12:0,42,540	0/0:41,0:33:51.16:0,51,663	0/0:59,0:37:36.07:0,36,465	0/0:64,0:18:49.38:0,49,610	0/0:58,0:45:39.13:0,39,503	0/0:100,0:66:99:0,175,2261	0/0:37,0:25:39.11:0,39,507	0/0:34,0:26:30.09:0,30,390	0/0:45,0:38:75.23:0,75,972	0/0:34,0:32:24.08:0,24,312	./.	0/0:79,0:67:87.27:0,87,1113	1/1:19,2:8:1.35:48,1,0	0/0:41,0:31:22.87:0,23,746	0/0:29,0:20:42.14:0,42,545	0/0:59,0:54:45.12:0,45,570	0/0:88,0:69:99:0,99,1282	0/0:46,0:24:27.08:0,27,351	0/0:60,0:45:32.88:0,33,403	0/0:83,0:65:69.20:0,69,897	0/0:58,0:49:60.18:0,60,764	0/0:73,0:58:99:0,162,2065	0/0:52,0:48:63.18:0,63,807	0/0:24,0:23:36.10:0,36,443
chr10	91486221	.	GTC	G	12640.85	PASS	AB=0.795;AC=42;AF=0.778;AN=54;BaseQRankSum=-7.507;DP=1380;FS=0.000;HRun=0;HaplotypeScore=263.2051;InbreedingCoeff=0.1078;MQ=39.14;MQ0=200;MQRankSum=1.118;QD=9.66;ReadPosRankSum=5.551;VQSLOD=3.7719;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:22:23.30:23,0,54	0/0:9,0:7:3.01:0,3,47	./.	0/1:56,0:2:0:0,0,0	1/1:20,50:62:38.71:450,39,0	1/1:22,16:32:50.85:539,51,0	1/1:46,13:41:33.71:489,34,0	1/1:44,12:22:32.90:286,33,0	1/1:15,41:47:50.16:563,50,0	1/1:63,28:67:86.26:1475,86,0	0/1:23,10:24:44.75:272,0,45	1/1:16,17:24:22.25:362,22,0	1/1:20,24:35:71.80:764,72,0	1/1:9,27:32:23.81:266,24,0	0/0:15,0:10:0.88:0,1,2	1/1:19,46:60:54.01:777,54,0	0/1:27,0:17:17.34:17,0,135	0/1:30,11:32:7.68:405,0,8	1/1:7,15:15:35.77:336,36,0	1/1:17,43:54:45.10:532,45,0	1/1:49,40:76:99:1137,109,0	0/1:18,24:30:27.96:161,0,28	0/1:12,33:39:0.70:230,0,1	1/1:53,34:73:25.04:690,25,0	0/1:17,32:43:10.50:524,0,11	1/1:21,57:62:99:1435,124,0	1/1:12,37:44:28.23:534,28,0	1/1:7,24:28:9.30:371,9,0
chr10	91486237	.	CTCTG	C	1886.80	PASS	AB=0.991;AC=20;AF=0.385;AN=52;BaseQRankSum=-5.198;DP=1265;FS=0.000;HRun=0;HaplotypeScore=308.1627;InbreedingCoeff=-0.5372;MQ=38.42;MQ0=210;MQRankSum=4.528;QD=1.99;ReadPosRankSum=-6.600;VQSLOD=0.7128;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:20:11.17:11,0,42	0/0:6,0:4:3.01:0,3,53	./.	./.	0/0:65,0:58:9.10:0,9,118	0/1:40,0:30:64.05:64,0,79	0/1:52,1:35:53.40:110,0,53	0/1:51,0:15:99:119,0,106	0/0:48,0:40:39.97:0,40,184	0/1:87,0:63:99:455,0,159	0/1:34,0:24:63.88:64,0,89	0/1:34,0:26:14:14,0,97	0/1:49,0:37:19.99:166,0,20	0/1:33,1:29:26.55:27,0,61	1/1:13,0:9:1.80:15,2,0	0/1:67,0:57:46.94:47,0,64	0/1:30,0:17:24.79:25,0,110	0/1:36,0:27:84.51:95,0,85	0/1:25,0:16:41.29:41,0,167	0/1:56,1:52:17.68:18,0,128	0/1:88,3:76:99:288,0,190	0/0:38,1:30:7.21:0,7,66	0/0:43,1:38:19.02:0,19,95	0/1:87,1:76:63.97:64,0,105	0/0:42,0:37:8.58:0,9,119	0/1:72,0:57:99:379,0,289	0/1:46,0:38:34.08:34,0,141	0/0:31,1:28:39.90:0,40,229
chr10	91486239	.	CTG	C	4009.03	PASS	AB=0.954;AC=42;AF=0.808;AN=52;BaseQRankSum=-2.700;DP=1258;FS=9.491;HRun=0;HaplotypeScore=284.7885;InbreedingCoeff=-0.0563;MQ=38.15;MQ0=217;MQRankSum=6.445;QD=3.30;ReadPosRankSum=5.979;VQSLOD=0.2794;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,7:20:2.04:113,0,2	0/0:5,1:4:3:0,3,28	./.	./.	1/1:66,0:59:25.89:148,26,0	1/1:37,0:28:24.02:136,24,0	1/1:52,0:33:13.22:117,13,0	0/1:51,0:14:25.91:26,0,55	1/1:48,0:40:31.97:202,32,0	1/1:84,0:62:47.30:346,47,0	1/1:31,0:24:14.83:113,15,0	0/1:35,0:27:18.14:100,0,18	1/1:49,0:38:43.70:250,44,0	1/1:33,0:29:22.02:104,22,0	1/1:17,2:9:1.94:16,2,0	1/1:67,0:57:56.60:307,57,0	0/1:23,7:17:39.23:112,0,39	0/1:35,0:25:8.13:92,0,8	0/1:27,0:17:48.52:49,0,62	1/1:58,1:54:41.15:196,41,0	1/1:88,0:75:49.84:355,50,0	1/1:36,1:28:13.55:60,14,0	1/1:44,0:39:19.04:93,19,0	1/1:88,1:76:20.06:217,20,0	1/1:42,0:37:43.76:209,44,0	0/1:71,0:58:54.28:248,0,54	1/1:45,1:38:39.63:262,40,0	0/1:32,0:28:45.96:138,0,46
chr10	91486309	.	GTCTC	G	771.02	PASS	AB=0.880;AC=9;AF=0.167;AN=54;BaseQRankSum=2.092;DP=1106;FS=18.826;HRun=0;HaplotypeScore=238.5416;InbreedingCoeff=0.0177;MQ=37.71;MQ0=280;MQRankSum=-5.316;QD=4.82;ReadPosRankSum=-0.767;VQSLOD=0.9919;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:27:58.08:0,58,1435	0/0:8,0:7:5.74:0,6,136	0/0:42,0:4:11.59:0,12,64	0/0:47,0:13:21.61:0,22,144	0/1:17,2:15:37.71:38,0,176	0/0:47,0:36:66.23:0,66,1663	0/0:75,0:50:90.08:0,90,2032	0/0:43,0:5:9.03:0,9,193	./.	0/0:82,0:53:99:0,147,3551	0/0:48,0:40:59.53:0,60,1465	0/1:9,2:7:9.99:98,0,10	0/0:53,0:39:75.23:0,75,1789	0/1:12,1:9:45.97:46,0,63	0/0:25,0:15:30.10:0,30,722	0/0:58,0:43:81.20:0,81,1911	0/0:26,0:16:30.08:0,30,731	0/0:43,0:29:69.13:0,69,1471	0/1:24,1:8:36.65:37,0,206	0/1:22,5:19:99:226,0,313	0/1:19,6:17:99:192,0,107	0/0:62,0:47:62.91:0,63,1514	0/0:57,0:46:87.26:0,87,2170	0/0:108,0:87:99:0,153,3460	0/0:49,0:37:52.43:0,52,1334	0/1:22,4:16:99:163,0,675	0/0:10,0:4:0:0,0,0	1/1:12,2:10:1.89:106,2,0
chr10	91486325	.	TTGTCTC	T	223.03	PASS	AB=0.922;AC=12;AF=0.222;AN=54;BaseQRankSum=5.490;DP=1020;FS=7.072;HRun=0;HaplotypeScore=286.0482;InbreedingCoeff=0.4757;MQ=41.32;MQ0=172;MQRankSum=-4.299;QD=2.35;ReadPosRankSum=-2.259;VQSLOD=1.2738;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:26:31.82:0,32,863	0/0:9,0:8:8.81:0,9,219	0/0:43,0:7:21.07:0,21,571	0/0:48,0:18:31.58:0,32,978	1/1:9,4:10:0.43:1,0,0	0/0:50,0:41:84.27:0,84,1975	0/0:64,0:47:84.27:0,84,2336	0/0:25,0:3:9.03:0,9,188	1/1:9,4:6:0.94:1,1,0	0/0:87,0:64:99:0,181,5316	0/0:49,0:43:80:0,80,1931	0/0:6,0:5:1.82:0,2,5	0/0:52,0:43:81.27:0,81,2325	./.	0/0:24,0:14:9.03:0,9,218	0/0:61,0:49:99:0,103,1985	0/0:21,0:13:21.02:0,21,523	0/0:44,0:31:73.08:0,73,1998	0/1:11,1:2:41.28:41,0,59	1/1:15,6:18:2.31:13,2,0	0/0:14,2:12:1.17:0,1,3	0/0:63,0:52:78.03:0,78,2189	0/0:59,0:50:99:0,108,2777	0/0:108,0:90:99:0,187,4592	0/0:50,0:41:64.48:0,64,1613	0/1:21,2:18:99:120,0,681	1/1:4,1:2:3.01:62,3,0	1/1:5,3:5:5.01:107,5,0
chr10	91486329	.	C	CTG	331.58	PASS	AB=0.958;AC=13;AF=0.250;AN=52;BaseQRankSum=7.808;DP=1024;FS=12.505;HRun=0;HaplotypeScore=264.8415;InbreedingCoeff=0.7345;MQ=41.74;MQ0=148;MQRankSum=-5.598;QD=3.68;ReadPosRankSum=-5.463;VQSLOD=0.4747;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:25:30.07:0,30,420	0/0:9,0:8:8.97:0,9,77	0/0:37,0:7:21.07:0,21,302	0/0:56,0:18:15.53:0,16,404	./.	0/0:50,0:42:84.16:0,84,1124	0/0:64,0:48:82.83:0,83,1205	0/0:23,0:3:8.99:0,9,84	./.	0/0:88,0:66:99:0,187,2713	0/0:49,0:43:80.37:0,80,1011	1/1:6,0:5:4.35:25,4,0	0/0:48,0:40:81.26:0,81,1168	1/1:5,0:3:2.84:14,3,0	0/0:25,0:14:9.03:0,9,135	0/0:62,0:51:84.80:0,85,994	0/0:21,0:14:17.99:0,18,209	0/0:41,0:31:46.08:0,46,1133	0/0:10,0:2:5.93:0,6,63	1/1:21,1:19:10.93:49,11,0	1/1:17,1:11:11.40:57,11,0	0/0:65,0:53:77.97:0,78,1073	0/0:61,0:52:99:0,111,1536	0/0:106,0:88:99:0,187,2660	0/0:53,0:44:69.58:0,70,849	0/1:22,1:18:99:187,0,298	1/1:8,0:4:8.88:61,9,0	1/1:8,0:5:10.33:101,10,0
chr10	91486333	.	CTG	C	986.73	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=4.866;DP=1006;FS=32.995;HRun=0;HaplotypeScore=255.0386;InbreedingCoeff=0.0740;MQ=42.55;MQ0=125;MQRankSum=-4.766;QD=4.42;ReadPosRankSum=-3.843;VQSLOD=1.4591;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:25:29.88:0,30,324	0/0:9,0:8:8.74:0,9,78	0/0:38,0:8:17.03:0,17,194	0/0:58,0:19:24.12:0,24,379	0/0:14,0:10:8.77:0,9,51	0/0:48,0:41:9.84:0,10,189	0/0:65,1:53:27.47:0,27,402	0/1:20,0:3:28.82:37,0,29	0/0:12,0:6:8.83:0,9,54	0/0:88,1:70:82.67:0,83,937	0/1:49,0:44:22.29:22,0,148	0/1:5,0:4:16.80:17,0,18	0/0:46,0:38:28.99:0,29,214	0/0:6,0:4:2.96:0,3,19	0/0:25,0:14:8.89:0,9,84	1/1:36,26:52:64.61:1021,65,0	0/1:20,0:15:1.02:1,0,154	0/0:42,0:32:54.59:0,55,296	0/1:8,0:2:3.25:3,0,16	0/0:17,0:14:20.38:0,20,118	0/0:18,0:9:6.56:0,7,27	0/0:64,0:53:41.04:0,41,374	0/0:65,0:56:49.47:0,49,396	0/0:107,0:89:84.37:0,84,552	0/1:53,0:44:3.39:3,0,132	0/0:19,0:17:15.72:0,16,176	0/0:6,0:4:0.64:0,1,29	0/1:6,0:3:11.12:12,0,11
chr10	91486338	.	TCTCTC	T	34.39	PASS	AB=0.778;AC=5;AF=0.089;AN=56;BaseQRankSum=4.194;DP=999;FS=5.223;HRun=0;HaplotypeScore=293.2226;InbreedingCoeff=0.2362;MQ=44.73;MQ0=98;MQRankSum=-2.405;QD=1.04;ReadPosRankSum=0.842;VQSLOD=1.3603;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:25:27.09:0,27,628	0/0:8,0:8:8.76:0,9,260	0/0:37,0:9:27.09:0,27,553	0/0:63,0:22:36.22:0,36,917	0/0:10,4:11:17.43:0,17,83	0/0:51,0:44:88.82:0,89,1186	0/0:63,0:54:83.43:0,83,1425	0/0:19,0:6:5.05:0,5,168	0/0:9,4:6:8.62:0,9,46	0/0:87,0:73:99:0,203,3230	0/0:47,0:43:72.19:0,72,1106	0/0:4,0:3:1.21:0,1,9	0/0:47,0:38:81.55:0,82,1355	0/0:7,0:5:6.62:0,7,32	0/0:23,0:14:9.03:0,9,159	0/0:60,0:52:99:0,122,2045	0/0:19,0:14:18.06:0,18,420	0/0:41,0:32:92.40:0,92,1268	1/1:3,1:1:3.01:31,3,0	0/0:7,6:11:19.46:0,19,95	0/0:19,3:13:8.61:0,9,34	0/0:68,0:57:72.24:0,72,1242	0/0:63,0:56:99:0,101,1433	0/0:108,0:90:99:0,185,2636	0/0:54,0:45:65.87:0,66,1054	0/1:17,2:17:37.95:38,0,418	0/1:5,1:4:27.54:28,0,29	0/1:1,3:3:3.58:49,0,4
chr10	91486351	.	CTCTG	C	7088.06	PASS	AB=0.860;AC=14;AF=0.250;AN=56;BaseQRankSum=-7.611;DP=953;FS=1.894;HRun=0;HaplotypeScore=260.0444;InbreedingCoeff=-0.2518;MQ=47.00;MQ0=38;MQRankSum=0.768;QD=10.66;ReadPosRankSum=-0.681;VQSLOD=4.0369;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:17:14.98:0,15,162	0/0:8,0:8:8.77:0,9,139	0/0:35,0:14:37.85:0,38,445	0/0:61,0:24:37.18:0,37,533	0/0:21,0:17:33.02:0,33,355	1/1:33,12:40:0.12:715,0,0	0/1:52,4:50:99:150,0,103	0/0:17,0:10:23.94:0,24,203	0/0:13,0:9:17.92:0,18,193	0/1:68,13:69:99:985,0,211	0/1:37,11:46:60.16:567,0,60	0/1:3,0:3:18.22:18,0,45	0/1:41,4:40:55.13:334,0,55	0/0:7,0:6:12.02:0,12,143	0/0:15,0:9:3.01:0,3,40	0/1:56,13:61:76.27:655,0,76	0/0:14,0:11:12.03:0,12,147	0/1:30,8:34:97.52:612,0,98	0/1:5,0:2:11.77:12,0,22	0/0:13,0:11:30.05:0,30,391	0/0:25,0:18:14.66:0,15,114	0/1:26,38:57:99:466,0,153	0/1:51,14:59:61.61:768,0,62	0/1:68,25:80:99:1362,0,216	0/1:46,7:46:21.25:444,0,21	0/0:21,0:20:36.39:0,36,481	0/0:10,0:7:9.71:0,10,163	0/0:5,0:5:4:0,4,87
chr10	91486353	.	CTG	C	10494.30	PASS	AB=0.947;AC=25;AF=0.446;AN=56;BaseQRankSum=-0.907;DP=930;FS=8.466;HRun=0;HaplotypeScore=227.4962;InbreedingCoeff=0.7762;MQ=44.72;MQ0=41;MQRankSum=5.331;QD=15.41;ReadPosRankSum=9.235;VQSLOD=3.1916;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:15:5.20:0,5,50	0/0:0,0:8:5.76:0,6,52	0/0:33,0:14:25.85:0,26,342	0/0:54,0:19:18.34:0,18,281	0/0:21,0:17:35.67:0,36,289	1/1:34,9:38:67.78:715,68,0	1/1:18,35:46:29.50:443,29,0	0/0:20,0:13:29.89:0,30,238	0/0:14,0:11:20.68:0,21,191	1/1:58,24:69:99:1612,107,0	1/1:32,14:43:62.72:688,63,0	0/0:3,0:3:2.98:0,3,45	1/1:24,19:38:67.72:963,68,0	0/0:7,0:7:14.88:0,15,119	0/1:13,0:6:0:0,0,0	1/1:65,0:58:99:1414,138,0	0/0:13,0:10:2.13:0,2,5	1/1:26,11:33:25.85:679,26,0	0/1:5,0:2:0.32:0,0,23	0/0:14,0:12:33.03:0,33,337	0/0:26,0:19:14.66:0,15,97	1/1:50,14:57:59.99:640,60,0	1/1:27,37:58:72.88:838,73,0	1/1:65,30:82:99:1644,129,0	1/1:34,16:44:66.65:748,67,0	0/1:17,4:20:99:110,0,343	0/0:10,0:7:16.95:0,17,140	0/0:5,0:5:12.57:0,13,92
chr10	91486483	.	G	GTC	5568.79	PASS	AB=0.814;AC=17;AF=0.315;AN=54;BaseQRankSum=-4.880;DP=1071;FS=3.836;HRun=0;HaplotypeScore=239.8369;InbreedingCoeff=-0.4366;MQ=34.26;MQ0=165;MQRankSum=1.249;QD=7.46;ReadPosRankSum=-3.883;VQSLOD=3.8235;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:23:3.01:0,3,39	./.	0/0:30,0:1:3.01:0,3,35	0/0:49,0:1:3.01:0,3,40	0/0:29,0:24:17.57:0,18,307	0/1:26,18:35:44.23:401,0,44	0/1:38,12:27:14.28:132,0,14	0/0:49,0:8:14.94:0,15,175	0/1:33,0:25:4.28:4,0,195	0/1:44,27:50:99:1040,0,449	0/1:16,14:23:99:118,0,138	0/1:26,0:27:28.31:28,0,96	0/1:38,28:55:99:742,0,228	0/1:30,0:27:2:2,0,200	0/0:32,0:23:9.03:0,9,114	0/1:30,29:43:99:944,0,111	0/0:33,0:19:24.03:0,24,300	0/1:17,13:22:1.11:538,0,1	0/0:22,0:7:1.80:0,2,145	0/1:37,0:29:25.72:26,0,244	0/1:29,0:19:2.93:3,0,245	0/1:26,14:35:99:163,0,269	0/1:32,17:40:99:408,0,401	0/1:45,29:60:99:784,0,122	0/1:14,14:23:21.97:213,0,22	0/1:41,0:30:23.82:24,0,451	0/0:38,0:28:25.89:0,26,424	0/0:2,0:2:3.01:0,3,39
chr10	91486491	.	GTC	G	378.48	PASS	AB=0.979;AC=12;AF=0.231;AN=52;BaseQRankSum=0.173;DP=1052;FS=1.234;HRun=0;HaplotypeScore=289.1520;InbreedingCoeff=-0.0034;MQ=37.51;MQ0=76;MQRankSum=-0.872;QD=1.10;ReadPosRankSum=-5.521;VQSLOD=1.2661;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,1:23:0.20:12,0,0	./.	./.	0/0:29,0:1:3.01:0,3,51	0/1:29,0:25:20.02:20,0,250	0/0:45,0:38:14.42:0,14,664	0/0:49,0:32:10.75:0,11,187	0/0:38,1:8:18.05:0,18,223	0/1:34,0:27:22.36:22,0,204	0/0:71,1:58:43.29:0,43,1778	0/0:31,0:24:27.08:0,27,388	0/1:29,0:24:76.63:77,0,119	0/0:61,0:51:86.93:0,87,1133	0/1:33,0:30:37.30:37,0,230	0/1:23,5:22:0.93:28,0,1	0/0:68,0:53:96.60:0,97,1340	1/1:28,3:21:8.35:158,8,0	0/0:31,1:26:29.20:0,29,831	0/1:18,0:8:26.79:27,0,174	0/0:35,1:30:7.40:0,7,290	0/1:35,0:24:71.70:72,0,266	0/0:44,0:39:45.41:0,45,533	0/0:53,0:45:31.86:0,32,881	0/0:88,0:76:90.99:0,91,1244	0/0:34,0:28:9.71:0,10,345	0/1:39,1:32:59.53:60,0,476	0/1:34,0:27:10.89:11,0,428	0/0:3,0:3:3.01:0,3,48
chr10	91486493	.	CTCTCTCTG	C	586.10	PASS	AB=1.000;AC=8;AF=0.154;AN=52;BaseQRankSum=-1.388;DP=1064;FS=26.934;HRun=0;HaplotypeScore=358.0563;InbreedingCoeff=0.5398;MQ=38.15;MQ0=65;MQRankSum=-2.841;QD=4.65;ReadPosRankSum=-5.113;VQSLOD=0.3259;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,4:23:5.97:71,6,0	./.	./.	0/0:23,0:1:3.01:0,3,52	0/0:31,0:26:38:0,38,422	0/0:48,0:40:20.57:0,21,1281	0/0:46,0:32:14.75:0,15,226	0/0:35,0:7:17.94:0,18,188	0/0:33,0:26:26.37:0,26,422	0/0:75,0:60:20.04:0,20,2612	0/0:34,0:27:32.93:0,33,507	0/0:31,0:25:24.19:0,24,417	0/0:60,0:50:92.86:0,93,1752	0/0:32,0:29:27.02:0,27,500	1/1:17,9:20:8.94:150,9,0	0/0:71,0:56:72.34:0,72,2208	1/1:27,4:23:17.49:474,17,0	0/0:32,0:26:51.99:0,52,1543	0/0:17,0:9:4.68:0,5,313	0/0:36,0:31:8.06:0,8,672	0/0:38,0:27:47.03:0,47,824	0/0:46,0:41:42.21:0,42,566	0/0:55,0:47:2.88:0,3,1181	0/0:91,0:78:69.05:0,69,2083	0/0:36,0:30:9.44:0,9,631	0/0:43,0:35:41:0,41,1287	0/1:36,0:28:20.51:21,0,835	0/1:5,0:4:4.91:5,0,93
chr10	91486501	.	G	GTC	2693.76	PASS	AB=0.930;AC=23;AF=0.460;AN=50;BaseQRankSum=-2.930;DP=1072;FS=10.314;HRun=0;HaplotypeScore=338.5632;InbreedingCoeff=0.1213;MQ=39.01;MQ0=65;MQRankSum=-0.222;QD=4.56;ReadPosRankSum=-1.118;VQSLOD=1.0603;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:20:5.26:31,5,0	./.	./.	./.	0/1:26,5:27:55.32:299,0,55	0/0:49,0:42:32.85:0,33,443	0/1:44,0:33:0.59:1,0,143	0/1:32,0:6:46.31:50,0,46	1/1:31,6:28:22.86:279,23,0	0/0:81,0:64:30.27:0,30,992	0/0:38,0:28:3.23:0,3,206	1/1:22,8:24:8.09:167,8,0	0/0:57,0:47:40.18:0,40,479	0/1:24,7:28:0.58:201,0,1	1/1:23,0:21:4.70:18,5,0	0/0:71,0:56:75.34:0,75,947	0/1:27,0:21:3.23:38,0,3	0/0:33,0:30:27.98:0,28,701	1/1:12,4:9:9.88:171,10,0	0/1:37,6:37:33.71:282,0,34	0/1:42,3:34:53.77:305,0,54	0/1:48,0:42:8.49:8,0,166	0/1:60,0:53:36.57:37,0,391	0/0:98,0:84:35.70:0,36,920	0/0:41,0:35:15.31:0,15,249	0/1:48,4:40:80.54:516,0,81	0/1:26,8:27:77.05:390,0,77	1/1:6,1:5:6.10:65,6,0
chr10	91486503	.	CTCTG	C	1126	PASS	AB=1.000;AC=20;AF=0.400;AN=50;BaseQRankSum=-4.534;DP=1074;FS=1.359;HRun=0;HaplotypeScore=359.5076;InbreedingCoeff=-0.3554;MQ=38.75;MQ0=74;MQRankSum=-0.018;QD=1.48;ReadPosRankSum=-3.281;VQSLOD=0.9785;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,3:18:0.09:50,0,0	./.	./.	./.	0/1:31,0:27:45.73:120,0,46	0/0:49,0:43:45.18:0,45,773	0/1:46,0:33:10.06:10,0,314	0/1:31,0:6:31.78:32,0,87	0/1:37,0:27:60.49:60,0,109	0/1:82,0:64:99:157,0,1520	0/1:39,0:28:34.57:35,0,290	0/1:30,0:24:12.85:13,0,158	0/1:56,0:46:66.23:66,0,786	0/1:30,0:28:21.21:21,0,136	0/1:27,0:21:3.47:11,0,3	0/0:72,0:56:7.23:0,7,1280	1/1:23,6:21:28.89:333,29,0	0/0:33,0:30:30.37:0,30,902	0/1:17,0:9:34.96:35,0,89	0/1:43,0:36:8.30:8,0,355	0/0:45,0:34:12.15:0,12,403	0/1:49,0:43:29.56:30,0,407	0/1:62,0:55:99:264,0,590	0/1:94,0:81:12.95:13,0,1234	0/0:42,0:34:30.86:0,31,415	0/0:52,0:41:8.51:0,9,651	0/1:34,0:27:17.28:17,0,340	0/0:8,0:5:11.76:0,12,95
chr10	91486507	.	GTC	G	2738.93	PASS	AB=0.920;AC=22;AF=0.440;AN=50;BaseQRankSum=-6.356;DP=1073;FS=3.643;HRun=0;HaplotypeScore=344.6290;InbreedingCoeff=0.1933;MQ=38.31;MQ0=94;MQRankSum=0.257;QD=4.32;ReadPosRankSum=-1.513;VQSLOD=1.9050;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:20:8.82:25,0,9	./.	./.	./.	1/1:20,11:27:14.99:182,15,0	0/1:47,0:41:10.22:10,0,305	0/1:44,1:31:74.41:74,0,151	0/0:26,3:3:5.46:0,5,28	1/1:27,10:27:8.62:160,9,0	0/1:87,0:66:78.89:79,0,618	0/0:38,0:27:22.22:0,22,168	0/1:19,12:25:21.65:227,0,22	0/0:53,0:44:45.61:0,46,396	1/1:20,12:29:12.75:178,13,0	0/0:25,0:18:5.82:0,6,34	0/0:67,1:52:68.77:0,69,590	0/1:29,0:20:7.56:54,0,8	0/0:34,0:31:10.08:0,10,339	1/1:15,2:9:12.83:138,13,0	1/1:27,15:35:15.16:369,15,0	1/1:36,17:40:11.81:415,12,0	0/0:46,0:40:30.35:0,30,247	0/1:60,2:55:84.75:85,0,204	0/0:91,1:78:28.21:0,28,498	0/0:47,0:35:11.24:0,11,149	0/1:37,16:41:40.65:588,0,41	0/1:23,10:27:53.22:324,0,53	0/1:8,0:5:0.99:2,0,1
chr10	91486509	.	C	CTCTG	5411.44	PASS	AB=0.996;AC=29;AF=0.580;AN=50;BaseQRankSum=-1.923;DP=1077;FS=15.728;HRun=0;HaplotypeScore=357.5166;InbreedingCoeff=-0.2560;MQ=38.06;MQ0=100;MQRankSum=1.819;QD=5.51;ReadPosRankSum=0.133;VQSLOD=2.1324;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:19:17.30:25,0,17	./.	./.	./.	1/1:25,3:24:25.75:210,26,0	0/1:48,0:42:99:169,0,427	0/1:47,0:33:99:111,0,182	0/0:32,0:3:8.26:0,8,41	1/1:35,1:25:23.34:260,23,0	0/1:90,0:69:99:585,0,1043	0/1:36,0:25:99:155,0,213	1/1:28,4:26:25.05:288,25,0	0/1:54,0:45:99:299,0,439	1/1:30,2:29:21.21:297,21,0	0/0:25,0:18:6.47:0,6,54	0/1:69,0:52:99:148,0,971	0/0:29,0:20:7.84:0,8,137	0/1:34,0:31:68.60:69,0,798	1/1:17,1:9:16.56:306,17,0	1/1:41,2:36:21.76:395,22,0	1/1:52,0:40:23.10:441,23,0	0/1:46,0:40:99:196,0,159	0/1:64,0:57:48.23:48,0,451	0/1:88,0:76:99:217,0,833	0/1:47,0:35:99:136,0,210	0/1:53,0:41:2.61:644,0,3	0/1:31,2:27:29.70:352,0,30	0/1:8,0:5:25.74:61,0,26
chr10	91486511	.	C	CTG	3153.51	PASS	AB=0.922;AC=23;AF=0.460;AN=50;BaseQRankSum=-1.689;DP=1095;FS=6.360;HRun=0;HaplotypeScore=345.2527;InbreedingCoeff=-0.8619;MQ=37.47;MQ0=113;MQRankSum=0.929;QD=3.07;ReadPosRankSum=-2.043;VQSLOD=1.2093;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:19:7.56:8,0,35	./.	./.	./.	0/1:28,0:24:43.53:46,0,44	0/1:39,8:42:99:238,0,376	0/1:43,6:33:82.30:82,0,244	0/0:32,0:3:8.72:0,9,63	0/1:36,0:25:58.65:59,0,93	0/1:78,14:69:99:651,0,1194	0/1:26,10:25:99:203,0,170	0/1:31,1:26:22.79:23,0,70	0/1:44,10:46:99:416,0,374	0/1:30,1:28:84.99:85,0,99	0/0:26,0:18:6.48:0,6,59	0/1:61,10:54:99:200,0,830	0/1:29,0:20:33.74:34,0,95	0/1:30,4:31:72.82:73,0,662	0/1:21,0:10:61.03:98,0,61	0/1:41,1:35:28.48:28,0,293	0/1:52,0:39:79.77:80,0,395	0/1:33,16:41:99:262,0,168	0/1:57,7:57:57.43:57,0,625	0/1:71,16:75:99:249,0,871	0/1:40,10:36:99:189,0,266	0/1:52,2:41:98.14:98,0,585	0/1:35,0:28:82.29:82,0,228	0/1:8,0:5:34.91:35,0,116
chr10	91486521	.	CTCTCTGTG	C	421.38	PASS	AB=0.971;AC=6;AF=0.120;AN=50;BaseQRankSum=1.367;DP=1146;FS=0.712;HRun=0;HaplotypeScore=401.5059;InbreedingCoeff=0.1722;MQ=35.16;MQ0=192;MQRankSum=-3.363;QD=2.00;ReadPosRankSum=-3.783;VQSLOD=0.6521;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,2:16:9.30:101,0,9	./.	./.	./.	0/0:28,0:23:19.57:0,20,364	0/0:51,0:44:42.53:0,43,860	0/0:57,0:35:32.90:0,33,577	0/0:45,0:2:6.02:0,6,81	0/0:36,0:25:27.06:0,27,429	0/0:95,0:66:94.95:0,95,2303	0/0:44,0:31:24.55:0,25,452	0/0:35,0:26:27.09:0,27,533	0/0:54,0:41:31.50:0,31,970	0/0:31,0:27:21.65:0,22,455	1/1:22,4:18:5.93:149,6,0	0/1:74,0:54:27.50:27,0,1408	0/1:26,1:18:99:222,0,170	0/0:34,0:30:41.57:0,42,1012	0/0:19,0:10:20.95:0,21,286	0/0:43,0:34:51.15:0,51,983	0/0:57,0:41:65.80:0,66,1286	0/0:49,0:41:32.56:0,33,678	0/1:61,0:52:42.38:42,0,899	0/0:77,0:64:4.38:0,4,1447	0/0:52,0:33:37.92:0,38,578	0/0:58,0:44:90.71:0,91,1982	0/0:38,0:28:64.98:0,65,1111	0/0:9,0:6:12.03:0,12,205
chr10	91486523	.	CTCTG	C	1567.25	PASS	AB=0.976;AC=15;AF=0.300;AN=50;BaseQRankSum=2.428;DP=1160;FS=23.082;HRun=0;HaplotypeScore=353.0164;InbreedingCoeff=-0.2377;MQ=34.66;MQ0=206;MQRankSum=-1.398;QD=2.16;ReadPosRankSum=4.747;VQSLOD=0.5289;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:17:2.61:18,0,3	./.	./.	./.	0/0:29,0:24:13.98:0,14,63	0/1:50,2:43:71.41:71,0,199	0/1:56,1:35:78.74:79,0,254	0/0:46,0:2:2.97:0,3,20	0/0:36,0:25:23.77:0,24,150	0/1:91,0:62:99:510,0,724	0/1:41,1:29:10.43:72,0,10	0/0:35,0:26:25.40:0,25,135	0/1:51,2:40:99:224,0,167	0/0:30,1:27:18.72:0,19,114	1/1:28,0:19:4.78:18,5,0	0/1:76,1:55:99:121,0,231	0/1:29,0:19:11.22:99,0,11	0/1:32,1:29:99:123,0,198	0/0:20,0:9:5.37:0,5,78	0/0:44,0:35:46.26:0,46,359	0/0:60,0:44:58.03:0,58,464	0/1:46,1:39:32.87:33,0,208	0/1:58,4:53:99:117,0,412	0/1:74,3:65:99:136,0,224	0/1:52,0:33:96.18:96,0,163	0/0:58,0:43:56.11:0,56,703	0/0:39,0:29:59.21:0,59,453	0/0:9,0:6:9.92:0,10,145
chr10	91486525	.	CTG	C	1227.86	PASS	AB=0.993;AC=22;AF=0.440;AN=50;BaseQRankSum=1.780;DP=1171;FS=3.316;HRun=0;HaplotypeScore=333.1703;InbreedingCoeff=-0.4520;MQ=33.88;MQ0=232;MQRankSum=3.933;QD=1.25;ReadPosRankSum=7.496;VQSLOD=1.1883;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,3:17:3.63:31,0,4	./.	./.	./.	1/1:24,0:20:13.46:58,13,0	0/1:52,0:43:24.54:25,0,87	0/1:56,0:34:20.26:20,0,141	0/0:46,0:3:3:0,3,29	0/1:36,0:25:19.68:29,0,20	0/1:91,0:62:99:226,0,277	0/1:42,0:29:8.43:8,0,11	1/1:38,0:26:19.31:97,19,0	0/1:53,0:39:19.96:41,0,20	0/1:29,0:25:5.19:42,0,5	0/0:26,3:20:4.59:0,5,16	0/1:78,0:55:65.77:119,0,66	0/0:29,0:19:14.14:0,14,96	0/1:34,0:29:33.93:71,0,34	0/1:24,0:10:28.75:45,0,29	0/1:45,0:35:48.90:91,0,49	0/1:63,0:44:65.11:107,0,65	0/0:48,0:39:15.64:0,16,174	0/1:59,0:50:43.51:44,0,158	0/1:78,0:64:58.21:84,0,58	0/1:54,0:34:27.79:28,0,51	0/1:58,0:41:99:127,0,165	0/1:37,0:27:87.12:87,0,105	0/0:9,0:6:8.82:0,9,60
chr10	91486621	.	G	GTC	7057.46	PASS	AB=0.789;AC=12;AF=0.214;AN=56;BaseQRankSum=0.415;DP=1316;FS=35.678;HRun=0;HaplotypeScore=273.4846;InbreedingCoeff=-0.2840;MQ=43.16;MQ0=173;MQRankSum=-5.544;QD=11.57;ReadPosRankSum=1.538;VQSLOD=2.9657;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:36:78.22:0,78,971	0/1:7,0:4:7.35:7,0,103	0/0:63,0:7:11.98:0,12,133	0/0:82,0:7:2.75:0,3,38	0/0:33,0:31:72.04:0,72,884	0/1:24,15:32:99:443,0,216	0/1:26,15:39:99:447,0,318	0/0:55,0:22:57.18:0,57,717	0/0:27,0:25:38.90:0,39,512	0/1:52,19:63:99:1057,0,877	0/1:35,19:50:99:939,0,328	0/0:30,0:23:42.14:0,42,540	0/1:41,22:56:99:877,0,608	0/0:35,0:28:15.85:0,16,566	0/0:48,0:39:72.68:0,73,898	0/1:49,15:56:99:557,0,666	0/0:45,0:28:60.09:0,60,723	0/1:26,14:33:99:645,0,416	0/0:31,0:16:45.08:0,45,523	0/0:48,0:46:99:0,123,1551	0/0:51,0:40:72.59:0,73,908	0/1:39,15:42:99:680,0,378	0/1:45,16:53:99:561,0,766	0/1:61,16:69:99:409,0,850	0/1:29,10:29:99:436,0,422	0/0:58,0:48:99:0,135,1697	0/0:42,0:36:72.54:0,73,952	0/0:5,0:4:9.03:0,9,116
chr10	91486633	.	GTC	G	549.30	PASS	AB=0.975;AC=8;AF=0.143;AN=56;BaseQRankSum=2.154;DP=1352;FS=4.728;HRun=0;HaplotypeScore=335.5830;InbreedingCoeff=0.7347;MQ=49.19;MQ0=101;MQRankSum=2.927;QD=3.03;ReadPosRankSum=2.945;VQSLOD=1.6217;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:39,7:34:35.31:229,35,0	0/1:7,0:6:5.83:20,0,6	0/0:72,0:14:23.10:0,23,236	0/0:103,0:19:20.47:0,20,243	0/0:32,0:31:79.27:0,79,1151	0/0:46,0:39:59.44:0,59,878	0/0:40,1:39:55.26:0,55,976	0/0:50,0:21:45.55:0,46,622	0/0:28,0:26:38.94:0,39,721	0/0:75,1:72:99:0,139,2649	0/0:55,0:53:75.83:0,76,1545	0/0:31,0:27:51.13:0,51,744	0/0:72,0:64:99:0,119,1686	0/0:37,0:31:54.17:0,54,823	1/1:43,6:41:30.01:176,30,0	0/0:70,0:66:99:0,104,1597	1/1:39,2:28:27.66:269,28,0	0/1:36,2:32:7.76:8,0,701	0/0:32,0:18:9.53:0,10,551	0/0:50,1:51:74.51:0,75,1667	0/0:47,0:41:76.30:0,76,1139	0/0:48,0:42:87.56:0,88,1245	0/0:55,0:53:99:0,114,1634	0/0:78,0:73:99:0,121,1836	0/0:40,1:33:40.87:0,41,1014	0/0:58,0:52:99:0,128,1971	0/0:42,1:37:76.30:0,76,1148	0/0:3,0:3:9.03:0,9,140
chr10	91486651	.	G	GTGTC	23789.27	PASS	AB=0.831;AC=42;AF=0.750;AN=56;BaseQRankSum=-5.299;DP=1261;FS=35.103;HRun=0;HaplotypeScore=288.8974;InbreedingCoeff=-0.1489;MQ=52.42;MQ0=46;MQRankSum=-0.826;QD=19.87;ReadPosRankSum=4.063;VQSLOD=3.2680;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:31:48.16:743,48,0	1/1:2,1:8:21.07:338,21,0	0/0:64,0:25:22.28:0,22,470	0/1:87,0:24:39.91:40,0,212	1/1:7,32:37:60.20:1436,60,0	0/1:30,13:38:99:724,0,409	0/1:39,6:39:99:456,0,407	1/1:22,0:27:51.09:837,51,0	1/1:5,17:24:36.76:904,37,0	0/1:61,14:73:99:1309,0,1408	0/1:32,28:62:99:777,0,676	1/1:7,22:26:33.11:818,33,0	0/1:55,8:59:99:791,0,804	1/1:5,27:30:48.16:1186,48,0	1/1:21,0:35:63.20:970,63,0	0/1:52,11:61:99:930,0,939	1/1:14,0:22:48.10:678,48,0	0/1:23,6:27:99:401,0,161	1/1:12,14:21:22.18:824,22,0	1/1:24,22:47:90.26:2012,90,0	1/1:26,14:36:48.16:1122,48,0	0/1:35,11:42:99:688,0,492	0/1:45,11:53:99:618,0,650	0/1:73,10:78:99:334,0,1212	0/1:25,10:33:99:623,0,264	1/1:29,26:52:38.03:2462,38,0	1/1:20,15:32:67.55:1544,68,0	1/1:0,5:5:9.03:223,9,0
chr10	91486783	.	G	GTC	9941.95	PASS	AB=0.870;AC=27;AF=0.482;AN=56;BaseQRankSum=-7.061;DP=1003;FS=7.761;HRun=0;HaplotypeScore=174.5343;InbreedingCoeff=0.4571;MQ=60.44;MQ0=25;MQRankSum=0.534;QD=16.14;ReadPosRankSum=0.601;VQSLOD=4.4392;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:57,0:51:5.51:607,0,6	0/1:11,0:9:17.74:141,0,18	0/0:34,0:11:17.23:0,17,167	0/1:72,0:24:14.32:14,0,209	1/1:8,28:35:9.40:633,9,0	0/0:37,0:35:55.17:0,55,645	0/0:33,0:33:16.20:0,16,501	1/1:18,22:35:63.04:866,63,0	1/1:7,27:35:27.46:917,27,0	0/0:49,0:41:82.80:0,83,975	0/0:19,0:17:21.06:0,21,250	1/1:11,15:24:0.39:490,0,0	0/0:30,0:28:53.93:0,54,610	0/1:19,7:26:29.38:492,0,29	1/1:44,0:44:51.50:912,51,0	0/0:38,0:38:47.59:0,48,568	1/1:41,0:33:60.17:690,60,0	0/0:34,0:35:68.79:0,69,763	1/1:9,12:15:33.11:517,33,0	1/1:14,19:34:35.53:682,36,0	0/1:25,20:42:32.19:927,0,32	0/1:39,0:38:10.15:10,0,302	0/0:23,0:23:33.07:0,33,369	0/0:62,0:61:95.98:0,96,1078	0/0:22,0:20:27.08:0,27,322	0/1:11,20:29:14.34:706,0,14	1/1:13,36:47:58.13:1294,58,0	1/1:4,0:4:3.01:44,3,0
chr10	91486785	.	C	CTG	7622.63	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=3.622;DP=1003;FS=11.988;HRun=0;HaplotypeScore=181.6364;InbreedingCoeff=0.0376;MQ=60.65;MQ0=20;MQRankSum=2.698;QD=13.40;ReadPosRankSum=5.527;VQSLOD=3.8807;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,28:53:59.66:1410,60,0	1/1:1,10:9:6.12:249,6,0	0/0:33,0:12:14.30:0,14,244	0/0:68,0:24:9.18:0,9,279	0/1:40,0:37:58.63:284,0,59	0/0:37,0:35:56.74:0,57,950	0/0:35,0:34:30.08:0,30,775	0/1:42,0:37:99:256,0,195	0/1:35,0:35:26.91:398,0,27	0/1:48,0:40:40.22:40,0,208	0/1:19,0:17:24.39:24,0,57	0/1:26,0:24:99:199,0,120	0/0:32,0:29:74.48:0,74,948	0/1:25,0:25:99:170,0,265	1/1:4,40:44:74.42:1605,74,0	0/0:40,0:39:79.59:0,80,991	1/1:20,21:33:83.81:1321,84,0	0/0:37,0:36:98.39:0,98,1213	0/1:21,0:15:11.22:208,0,11	0/1:35,0:34:99:280,0,151	0/1:43,0:41:99:375,0,191	0/0:39,0:37:14.83:0,15,453	0/0:24,0:24:53.68:0,54,663	0/0:63,0:61:99:0,129,1684	0/0:22,0:20:39.05:0,39,505	0/1:30,0:29:99:227,0,236	0/1:49,0:47:32:576,0,32	0/0:4,0:4:8.50:0,8,72
chr10	91487189	.	TA	T	1926.72	PASS	AB=0.733;AC=22;AF=0.393;AN=56;BaseQRankSum=6.627;DP=520;FS=0.408;HRun=13;HaplotypeScore=58.2029;InbreedingCoeff=0.8082;MQ=65.60;MQ0=14;MQRankSum=0.555;QD=9.88;ReadPosRankSum=1.757;VQSLOD=2.9025;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,4:37:37.12:0,37,656	0/0:12,1:13:11.15:0,11,270	0/0:22,1:12:20.87:0,21,171	0/0:17,1:9:15.42:0,15,107	0/0:21,2:23:35.11:0,35,482	1/1:4,15:20:37.80:268,38,0	1/1:1,8:10:22.73:151,23,0	0/0:26,0:24:44.51:0,45,373	0/0:11,0:11:23.82:0,24,211	1/1:5,10:15:26.75:194,27,0	1/1:3,11:13:23.82:175,24,0	0/0:16,0:16:38.90:0,39,351	1/1:5,15:20:32.79:241,33,0	0/0:16,1:17:19.90:0,20,336	0/0:13,1:13:33.05:0,33,321	1/1:5,12:18:31.82:225,32,0	0/0:25,1:26:44.18:0,44,579	0/1:4,14:19:11.53:244,0,12	0/1:25,2:26:6.66:7,0,422	0/0:14,0:14:9.18:0,9,237	0/0:11,0:11:2.54:0,3,178	1/1:1,6:7:11.02:86,11,0	1/1:2,10:13:22.69:159,23,0	1/1:2,8:11:25.90:181,26,0	1/1:5,13:19:13.68:212,14,0	0/0:20,2:23:10.10:0,10,404	0/0:27,1:28:44.50:0,44,571	0/0:18,1:16:20.44:0,20,358
chr10	91488456	.	T	TAC	27236.79	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-9.384;DP=632;FS=5.390;HRun=0;HaplotypeScore=61.2959;InbreedingCoeff=0.9758;MQ=77.68;MQ0=3;MQRankSum=-9.611;QD=46.32;ReadPosRankSum=5.663;VQSLOD=6.1087;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:90.31:1621,90,0	1/1:5,6:10:15.05:270,15,0	0/0:22,0:22:62.21:0,62,795	0/0:22,0:22:48.11:0,48,618	1/1:0,22:22:57.20:1026,57,0	1/1:2,20:22:60.21:1081,60,0	1/1:4,16:21:48.16:844,48,0	1/1:1,24:25:69.23:1215,69,0	1/1:1,18:19:45.15:810,45,0	1/1:1,20:21:60.19:1051,60,0	1/1:0,17:17:48.16:864,48,0	1/1:2,25:29:66.23:1189,66,0	1/1:2,15:17:42.14:756,42,0	1/1:1,26:27:66.23:1188,66,0	1/1:0,27:28:69.24:1243,69,0	1/1:1,30:31:87.30:1567,87,0	1/1:5,28:33:78.27:1404,78,0	1/1:0,16:16:48.16:850,48,0	1/1:2,15:18:48.16:847,48,0	1/1:2,28:30:78.27:1404,78,0	1/1:1,24:25:72.25:1296,72,0	1/1:0,12:13:27.09:486,27,0	1/1:2,26:28:75.26:1351,75,0	1/1:0,27:27:78.27:1405,78,0	1/1:2,13:13:33.11:594,33,0	1/1:0,24:24:72.20:1257,72,0	1/1:1,27:29:78.27:1403,78,0	1/1:0,5:5:12.04:216,12,0
chr10	91490270	.	AT	A	4381.81	PASS	AB=0.737;AC=22;AF=0.393;AN=56;BaseQRankSum=6.493;DP=602;FS=2.951;HRun=10;HaplotypeScore=70.9408;InbreedingCoeff=0.8537;MQ=67.91;MQ0=4;MQRankSum=-0.941;QD=18.26;ReadPosRankSum=2.439;VQSLOD=5.7122;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,117,1285	0/0:7,0:7:18.05:0,18,199	0/1:19,2:11:11.98:12,0,154	0/0:19,1:10:0.74:0,1,179	0/0:22,0:22:57.11:0,57,617	1/1:2,17:19:50.99:443,51,0	1/1:4,16:20:41.99:365,42,0	0/0:37,0:37:87.69:0,88,949	0/0:19,0:19:51.14:0,51,564	1/1:2,21:23:59.97:521,60,0	1/1:1,14:15:32.98:286,33,0	0/0:21,0:21:54.15:0,54,597	1/1:2,19:21:47.99:417,48,0	0/0:22,0:22:51.14:0,51,564	0/0:18,0:18:51.14:0,51,564	1/1:3,17:20:20.81:410,21,0	0/0:20,0:20:48.12:0,48,523	1/1:2,25:27:52.06:556,52,0	0/0:33,1:34:55.14:0,55,820	0/0:16,0:16:37.34:0,37,401	0/0:31,0:31:84.21:0,84,918	1/1:2,25:27:68.97:599,69,0	0/1:3,11:14:0.20:227,0,0	1/1:2,18:20:44.98:391,45,0	1/1:3,10:13:17.99:156,18,0	0/0:28,0:29:81.05:0,81,871	0/0:15,0:15:42.11:0,42,457	0/0:8,0:8:15.04:0,15,166
chr10	91491823	.	G	GTTT	2034.02	PASS	AB=0.960;AC=9;AF=0.161;AN=56;BaseQRankSum=10.149;DP=668;FS=4.599;HRun=3;HaplotypeScore=95.3146;InbreedingCoeff=0.8946;MQ=64.67;MQ0=4;MQRankSum=-5.564;QD=18.16;ReadPosRankSum=0.618;VQSLOD=0.5430;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:31:45.27:828,45,0	1/1:2,9:11:20.57:417,21,0	0/0:26,0:18:47.08:0,47,673	0/0:25,0:19:44.93:0,45,622	0/0:29,0:29:87.20:0,87,1277	0/0:16,0:16:45.12:0,45,655	0/0:23,0:23:69.21:0,69,1032	0/0:26,0:25:69.19:0,69,1033	0/0:21,0:21:57.17:0,57,885	0/0:36,0:34:99:0,99,1513	0/0:20,0:20:57.18:0,57,887	0/0:28,0:28:72.20:0,72,1081	0/0:25,0:25:72.24:0,72,1139	0/0:17,0:17:45.11:0,45,653	1/1:3,20:25:32.92:587,33,0	0/0:29,0:29:78.25:0,78,1216	1/1:1,14:21:24.03:359,24,0	0/1:23,1:24:5.12:5,0,863	0/0:35,0:35:99:0,99,1426	0/0:18,0:18:54.17:0,54,828	0/0:26,0:26:72.23:0,72,1117	0/0:16,0:16:45.15:0,45,711	0/0:21,0:21:60.15:0,60,876	0/0:42,0:42:99:0,114,1786	0/0:13,0:13:39.13:0,39,618	0/0:25,0:25:72.25:0,72,1140	0/0:25,0:25:69.23:0,69,1099	0/0:13,0:13:36.12:0,36,567
chr10	91491927	.	G	GT	3601.96	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-3.591;DP=668;FS=1.803;HRun=7;HaplotypeScore=63.2447;InbreedingCoeff=0.9913;MQ=70.79;MQ0=0;MQRankSum=-3.783;QD=30.53;ReadPosRankSum=3.013;VQSLOD=4.1287;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,48:52:99:1630,135,0	1/1:1,11:12:35.98:413,36,0	0/0:20,0:20:47.76:0,48,463	0/0:14,0:14:39.06:0,39,374	0/0:12,0:13:35.09:0,35,325	0/0:20,0:20:51.08:0,51,493	0/0:26,0:26:78.13:0,78,753	0/0:24,0:24:57.08:0,57,550	0/0:18,0:18:51.08:0,51,492	0/0:26,0:26:75.12:0,75,724	0/0:21,0:21:57.08:0,57,549	0/0:30,0:30:78.12:0,78,753	0/0:22,0:22:63.10:0,63,608	0/0:28,0:28:84.14:0,84,811	1/1:2,29:31:75.23:906,75,0	0/0:30,0:30:84.12:0,84,805	1/1:2,21:23:54.17:652,54,0	0/0:17,0:17:48.08:0,48,463	0/0:17,0:17:45.04:0,45,423	0/0:36,0:36:81.11:0,81,776	0/0:34,0:34:93.11:0,93,886	0/0:23,0:23:57.08:0,57,550	0/0:23,0:23:60.09:0,60,579	0/0:18,0:18:51.05:0,51,487	0/0:25,0:25:69.10:0,69,666	0/0:39,0:39:99:0,102,981	0/0:21,0:21:60.09:0,60,579	0/0:5,0:5:12.02:0,12,116
chr10	91492747	.	AGTCCG	A	5380.70	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.853;DP=701;FS=1.905;HRun=0;HaplotypeScore=128.4479;InbreedingCoeff=0.9994;MQ=84.51;MQ0=0;MQRankSum=-3.569;QD=44.47;ReadPosRankSum=3.859;VQSLOD=4.7104;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,51:53:89.91:1877,90,0	1/1:0,10:10:23.98:430,24,0	0/0:25,0:25:66.19:0,66,1703	0/0:22,0:21:51.02:0,51,1306	0/0:20,0:20:60.19:0,60,1783	0/0:33,0:33:87.30:0,87,2644	0/0:27,0:27:78.25:0,78,2360	0/0:32,0:32:93.30:0,93,2675	0/0:19,0:19:54.19:0,54,1658	0/0:22,0:22:63.21:0,63,1877	0/0:21,0:21:63.20:0,63,1896	0/0:23,0:23:66.22:0,66,1971	0/0:15,0:15:42.13:0,42,1200	0/0:20,0:20:60.19:0,60,1721	1/1:1,24:25:66.23:1413,66,0	0/0:34,0:33:99:0,99,3102	1/1:2,31:33:81.11:1660,81,0	0/0:29,0:28:81.21:0,81,2316	0/0:26,0:26:75.69:0,76,2041	0/0:28,0:28:84.25:0,84,2400	0/0:30,0:30:84.19:0,84,2398	0/0:19,0:19:57.17:0,57,1500	0/0:18,0:18:48.16:0,48,1409	0/0:35,0:35:96.32:0,96,2956	0/0:21,0:21:63.22:0,63,1996	0/0:24,0:24:69.21:0,69,1872	0/0:25,0:25:69.22:0,69,2108	0/0:12,0:12:36.09:0,36,998
chr10	91493111	.	G	GT	509	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.588;DP=764;FS=3.130;HRun=6;HaplotypeScore=79.4639;InbreedingCoeff=0.9969;MQ=77.71;MQ0=0;MQRankSum=1.061;QD=25.45;ReadPosRankSum=-0.854;VQSLOD=3.2848;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.19:0,87,887	0/0:8,0:8:24.05:0,24,245	0/0:37,0:35:53.16:0,53,602	0/0:38,0:28:38.46:0,38,462	0/0:25,0:25:63.13:0,63,642	0/0:38,0:38:99:0,108,1086	0/0:20,0:20:60.14:0,60,612	0/0:36,0:36:87.18:0,87,881	0/0:31,0:31:90.20:0,90,918	0/0:31,0:31:84.18:0,84,856	0/0:25,0:25:69.14:0,69,696	0/0:20,0:20:57.10:0,57,568	0/0:22,0:22:60.11:0,60,603	0/0:29,0:29:81.16:0,81,818	0/0:38,0:38:99:0,105,1065	0/0:27,0:27:78.18:0,78,796	0/0:23,0:23:69.16:0,69,704	0/0:15,0:15:45.10:0,45,459	0/0:29,0:29:78.15:0,78,784	0/0:32,0:32:87.18:0,87,880	1/1:3,17:20:48.15:604,48,0	0/0:31,0:31:87.19:0,87,887	0/0:33,0:33:96.22:0,96,979	0/0:22,0:22:60.13:0,60,612	0/0:25,0:25:75.17:0,75,765	0/0:30,0:30:69.15:0,69,704	0/0:36,0:36:99:0,102,1040	0/0:11,0:11:27.06:0,27,275
chr10	91493987	.	CA	C	2109.80	PASS	AB=0.897;AC=10;AF=0.179;AN=56;BaseQRankSum=12.362;DP=515;FS=0.000;HRun=11;HaplotypeScore=59.5638;InbreedingCoeff=0.7185;MQ=62.59;MQ0=2;MQRankSum=2.054;QD=15.29;ReadPosRankSum=3.354;VQSLOD=4.1726;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,35:36:98.89:813,99,0	1/1:0,8:7:20.98:172,21,0	0/0:13,0:8:5.79:0,6,48	0/1:15,1:15:27.67:28,0,86	0/0:24,1:26:41.34:0,41,610	0/0:13,0:13:30.08:0,30,320	0/0:16,0:16:39.09:0,39,409	0/0:24,1:25:38.42:0,38,569	0/0:14,0:14:33.07:0,33,344	0/0:18,0:18:36.04:0,36,371	0/1:16,2:18:6.76:7,0,329	0/0:12,0:12:21.05:0,21,224	0/0:13,0:13:22.61:0,23,326	0/0:11,0:11:33.08:0,33,346	1/1:2,15:17:41.95:345,42,0	0/0:14,0:14:27.07:0,27,288	1/1:1,41:42:99:911,111,0	0/0:21,0:22:53.93:0,54,546	0/0:13,1:14:8.43:0,8,289	0/0:16,0:19:44.87:0,45,431	0/0:19,0:19:42.11:0,42,448	0/0:15,1:16:36.09:0,36,383	0/0:21,0:21:51.12:0,51,535	0/0:30,1:31:53.53:0,54,762	0/0:17,2:20:7.69:0,8,477	0/0:14,0:14:14.90:0,15,353	0/0:16,0:16:42.10:0,42,443	0/0:10,0:9:18.03:0,18,185
chr10	91494158	.	AT	A	1744.46	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.909;DP=400;FS=10.699;HRun=1;HaplotypeScore=41.0329;InbreedingCoeff=0.9750;MQ=68.31;MQ0=1;MQRankSum=-1.766;QD=35.60;ReadPosRankSum=1.325;VQSLOD=2.6496;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:45.11:605,45,0	1/1:0,4:4:12.04:168,12,0	0/0:11,0:9:26.99:0,27,333	0/0:10,0:4:12.04:0,12,180	0/0:26,0:26:78.26:0,78,1167	0/0:12,0:12:32.88:0,33,441	0/0:9,0:9:27.07:0,27,383	0/0:20,0:20:60.20:0,60,876	0/0:9,0:9:27.09:0,27,401	0/0:14,0:14:42.14:0,42,629	0/0:16,0:16:45.06:0,45,645	0/0:11,0:11:30.07:0,30,407	0/0:16,0:16:39.11:0,39,563	0/0:14,0:14:39.11:0,39,560	1/1:0,11:11:30.10:419,30,0	0/0:18,0:18:54.18:0,54,807	1/1:0,18:18:51.17:711,51,0	0/0:15,0:15:42.07:0,42,575	0/0:19,0:19:54.11:0,54,744	0/0:18,0:18:50.26:0,50,761	0/0:11,0:11:33.11:0,33,494	0/0:6,0:6:18.03:0,18,228	0/0:12,0:12:34.67:0,35,497	0/0:7,0:7:15.14:0,15,262	0/0:18,0:18:54.13:0,54,746	0/0:26,0:26:78.25:0,78,1146	0/0:19,0:18:57.18:0,57,831	0/0:14,0:14:42.14:0,42,628
chr10	91494224	.	C	CA	1974.08	PASS	AB=0.795;AC=30;AF=0.536;AN=56;BaseQRankSum=0.208;DP=471;FS=0.492;HRun=14;HaplotypeScore=95.3234;InbreedingCoeff=0.4039;MQ=60.99;MQ0=6;MQRankSum=-1.148;QD=6.45;ReadPosRankSum=-0.507;VQSLOD=2.6604;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:16:23.78:101,24,0	1/1:8,0:8:11.40:57,11,0	0/0:21,0:9:5:0,5,27	0/1:29,0:7:5.19:5,0,9	0/0:26,1:30:16.77:0,17,198	0/1:7,12:19:18.81:225,0,19	0/1:6,10:16:27.77:155,0,28	0/0:20,0:21:23.97:0,24,142	0/0:7,0:8:16.81:0,17,102	1/1:12,9:23:29.65:234,30,0	1/1:4,9:13:4.09:119,4,0	0/0:7,0:7:9.19:0,9,58	1/1:2,12:14:9:79,9,0	0/1:7,1:12:10.50:11,0,53	1/1:12,0:13:27.23:136,27,0	1/1:3,9:12:4.73:165,5,0	1/1:14,0:13:17.42:102,17,0	1/1:2,17:19:25.67:341,26,0	0/1:15,2:17:1.68:2,0,108	0/0:16,0:21:32.57:0,33,169	0/0:9,0:9:14.64:0,15,91	1/1:3,4:8:8.17:100,8,0	0/1:8,10:18:17.70:19,0,18	0/1:7,4:11:56.14:80,0,56	1/1:15,9:25:29.60:231,30,0	0/0:20,0:22:18.20:0,18,106	0/0:24,0:23:34.38:0,34,203	0/1:12,1:15:7.65:8,0,70
chr10	91494239	.	G	GGA	997.87	PASS	AB=0.858;AC=7;AF=0.125;AN=56;BaseQRankSum=1.432;DP=483;FS=0.000;HRun=0;HaplotypeScore=72.6467;InbreedingCoeff=0.2182;MQ=64.77;MQ0=6;MQRankSum=-5.154;QD=8.11;ReadPosRankSum=-0.272;VQSLOD=3.0839;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,5:15:65.97:213,0,66	1/1:5,5:9:6.75:332,7,0	0/1:34,0:14:0.85:1,0,252	0/1:34,0:10:20.85:21,0,130	0/0:26,0:26:75.22:0,75,1112	0/0:17,0:17:48.14:0,48,629	0/0:16,0:16:35.81:0,36,434	0/0:27,0:27:72.19:0,72,1061	0/0:10,0:10:30.10:0,30,454	0/0:18,0:18:54.16:0,54,734	0/0:17,0:17:50.99:0,51,682	0/0:9,0:9:24.08:0,24,388	0/0:15,0:15:17.97:0,18,221	0/0:13,0:13:36.10:0,36,527	0/1:9,4:12:6.09:247,0,6	0/0:12,0:12:30.01:0,30,344	0/1:11,4:14:30.41:308,0,30	0/0:20,0:20:50.02:0,50,542	0/0:20,0:20:57.18:0,57,865	0/0:22,0:22:60.20:0,60,932	0/0:8,0:8:24.08:0,24,386	0/0:8,0:8:24.06:0,24,307	0/0:19,0:19:39.10:0,39,574	0/0:14,0:14:41.94:0,42,537	0/0:18,0:18:53.23:0,53,593	0/0:20,0:19:54.18:0,54,834	0/0:23,0:22:62.97:0,63,934	0/0:8,0:8:24.08:0,24,364
chr10	91494649	.	CT	C	855.19	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.466;DP=539;FS=1.846;HRun=1;HaplotypeScore=73.7022;InbreedingCoeff=0.9894;MQ=66.62;MQ0=1;MQRankSum=-11.118;QD=14.02;ReadPosRankSum=0.380;VQSLOD=2.8807;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:21:61.73:429,62,0	1/1:0,5:4:11.98:118,12,0	0/0:17,0:16:48.11:0,48,707	0/0:13,0:13:30.90:0,31,438	0/0:21,0:21:63.20:0,63,980	0/0:20,0:20:57.14:0,57,858	0/0:27,0:27:81.25:0,81,1264	0/0:16,0:16:48.15:0,48,737	0/0:17,0:17:51.17:0,51,806	0/0:19,0:19:57.19:0,57,910	0/0:15,0:15:45.14:0,45,687	0/0:17,0:17:51.17:0,51,814	0/0:19,0:19:57.18:0,57,873	0/0:25,0:25:75.21:0,75,1160	1/1:0,13:11:32.55:246,33,0	0/0:21,0:21:63.21:0,63,1005	1/1:7,10:17:30.95:220,31,0	0/0:39,0:39:99:0,111,1731	0/0:23,0:23:69.21:0,69,1035	0/0:18,0:18:54.15:0,54,814	0/0:23,0:23:69.22:0,69,1075	0/0:9,0:9:27.09:0,27,429	0/0:11,0:11:29.89:0,30,466	0/0:32,0:32:96.27:0,96,1459	0/0:15,0:15:42.14:0,42,671	0/0:34,0:34:99:0,102,1569	0/0:20,0:19:57.18:0,57,881	0/0:7,0:7:21.07:0,21,336
chr10	91494651	.	GGGAAAGA	G	2290.87	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.313;DP=549;FS=1.858;HRun=0;HaplotypeScore=134.4090;InbreedingCoeff=0.9897;MQ=66.27;MQ0=1;MQRankSum=-11.057;QD=38.18;ReadPosRankSum=0.743;VQSLOD=3.0930;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:21:62.31:1138,62,0	1/1:2,3:4:11.74:157,12,0	0/0:17,0:16:48.16:0,48,1786	0/0:12,0:12:30.10:0,30,1109	0/0:22,0:22:66.21:0,66,2542	0/0:19,0:19:54.17:0,54,2090	0/0:28,0:28:84.27:0,84,3228	0/0:17,0:17:51.18:0,51,2078	0/0:17,0:17:51.16:0,51,2036	0/0:19,0:19:57.20:0,57,2362	0/0:17,0:17:51.14:0,51,1870	0/0:18,0:18:54.19:0,54,2177	0/0:19,0:19:57.15:0,57,2209	0/0:26,0:26:78.26:0,78,3062	1/1:3,10:11:31.51:508,32,0	0/0:22,0:22:63.22:0,63,2618	1/1:7,9:16:31.65:646,32,0	0/0:39,0:39:99:0,117,4389	0/0:25,0:25:75.24:0,75,2714	0/0:18,0:18:53.91:0,54,2027	0/0:24,0:24:72.25:0,72,2862	0/0:10,0:10:27.08:0,27,1033	0/0:11,0:11:30.05:0,30,1132	0/0:31,0:31:93.26:0,93,3485	0/0:14,0:14:42.14:0,42,1602	0/0:35,0:35:99:0,105,4164	0/0:20,0:19:57.17:0,57,2166	0/0:9,0:9:27.09:0,27,1094
chr10	91495506	.	G	GA	549.36	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-2.843;DP=366;FS=3.058;HRun=18;HaplotypeScore=49.4571;InbreedingCoeff=0.7256;MQ=46.19;MQ0=24;MQRankSum=0.748;QD=10.56;ReadPosRankSum=1.812;VQSLOD=2.0306;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,2:16:33.07:386,33,0	1/1:1,4:5:9.03:113,9,0	0/0:31,0:2:0:0,0,0	0/0:36,0:4:9.45:0,9,82	0/0:13,0:11:17.62:0,18,158	0/0:9,0:8:21.03:0,21,204	0/0:11,0:9:23.78:0,24,219	0/0:32,0:25:59.39:0,59,556	0/0:11,0:11:14.95:0,15,132	0/0:8,0:8:20.74:0,21,181	0/0:10,0:8:23.77:0,24,214	0/0:6,0:6:15:0,15,142	0/0:6,0:5:6:0,6,54	0/0:5,0:5:8.97:0,9,74	1/1:2,4:6:3.01:38,3,0	0/0:9,0:7:17.06:0,17,152	1/1:5,20:24:16.97:155,17,0	0/0:11,0:9:18.09:0,18,155	0/0:22,0:21:49.22:0,49,425	0/0:11,0:8:15.02:0,15,143	0/0:2,0:2:2.88:0,3,30	0/0:5,0:4:6.01:0,6,60	0/0:8,0:7:4.68:0,5,122	0/0:9,0:9:23.78:0,24,220	0/0:12,0:12:26.62:0,27,220	0/0:14,0:14:35.96:0,36,343	0/0:17,0:15:43.47:0,43,369	0/0:16,0:15:11.54:0,12,144
chr10	91495529	.	GAA	G	1778.22	PASS	AB=0.889;AC=23;AF=0.411;AN=56;BaseQRankSum=1.444;DP=371;FS=0.000;HRun=11;HaplotypeScore=51.6418;InbreedingCoeff=0.8378;MQ=58.10;MQ0=8;MQRankSum=0.256;QD=15.74;ReadPosRankSum=3.369;VQSLOD=1.6481;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:17:45.14:0,45,647	0/0:5,0:5:3.01:0,3,46	0/0:23,0:6:11.99:0,12,133	0/0:30,0:6:8.56:0,9,54	0/0:17,0:17:45.12:0,45,630	1/1:1,7:7:15.04:160,15,0	1/1:2,11:13:21.04:223,21,0	0/0:34,0:35:77.73:0,78,1103	0/0:10,0:10:18.05:0,18,257	1/1:3,8:11:24.05:255,24,0	1/1:3,10:12:27.04:287,27,0	0/0:6,0:7:20.56:0,21,284	1/1:0,4:4:12.03:127,12,0	0/0:6,0:6:14.73:0,15,150	0/0:8,0:8:12.03:0,12,164	1/1:1,6:7:15.02:159,15,0	0/0:30,0:29:26.90:0,27,379	1/1:4,8:12:17.97:191,18,0	0/0:20,0:20:48.16:0,48,715	0/0:11,0:9:18.05:0,18,250	0/0:3,0:3:6.01:0,6,72	1/1:0,3:3:9.02:96,9,0	1/1:1,4:4:12.03:128,12,0	1/1:2,9:11:12.02:128,12,0	1/1:2,8:10:21.02:223,21,0	0/1:14,2:16:15.62:16,0,592	0/0:15,0:15:45.07:0,45,595	0/0:15,0:16:26.02:0,26,312
chr10	91495686	.	GA	G	3703.46	PASS	AB=0.726;AC=46;AF=0.821;AN=56;BaseQRankSum=0.497;DP=359;FS=4.584;HRun=14;HaplotypeScore=45.1955;InbreedingCoeff=0.0904;MQ=75.08;MQ0=0;MQRankSum=-1.666;QD=10.83;ReadPosRankSum=4.173;VQSLOD=3.0850;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,18:25:29.64:329,30,0	1/1:1,2:3:5.95:41,6,0	0/1:18,0:8:13.78:14,0,56	0/0:15,0:11:10.86:0,11,67	1/1:10,11:21:10.28:165,10,0	1/1:2,9:11:26.77:185,27,0	1/1:1,2:3:5.01:26,5,0	1/1:9,17:27:7.86:326,8,0	0/1:6,9:15:18.92:152,0,19	0/1:5,3:8:15.69:50,0,16	1/1:3,4:7:14.68:102,15,0	1/1:2,9:10:23.76:164,24,0	1/1:1,4:5:8.92:61,9,0	1/1:4,8:11:14.82:103,15,0	1/1:6,5:11:20.04:130,20,0	0/1:7,6:13:30.28:64,0,30	1/1:5,17:27:48.83:297,49,0	0/1:3,7:10:21.67:134,0,22	1/1:12,11:23:34.55:232,35,0	1/1:3,2:5:5.91:41,6,0	1/1:2,15:18:31.71:211,32,0	0/0:2,0:2:0:0,0,0	1/1:3,1:4:1.59:18,2,0	1/1:3,10:13:35.70:246,36,0	1/1:1,9:10:23.80:164,24,0	0/1:7,3:11:4.68:74,0,5	1/1:5,14:20:13.42:223,13,0	1/1:1,7:9:22.87:150,23,0
chr10	91496031	.	ATT	A	186.31	PASS	AC=12;AF=0.750;AN=16;BaseQRankSum=-0.963;DP=145;FS=5.969;HRun=2;HaplotypeScore=71.8415;MQ=80.47;MQ0=12;MQRankSum=-1.172;QD=15.53;ReadPosRankSum=2.051;VQSLOD=1.1039;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:2.99:24,3,0	./.	0/0:53,1:13:13.83:0,14,173	0/0:70,2:18:12.91:0,13,338	./.	./.	./.	1/1:2,4:4:12.04:177,12,0	./.	./.	./.	1/1:1,0:1:2.99:23,3,0	./.	./.	./.	./.	1/1:1,0:1:3:27,3,0	./.	1/1:1,1:2:1.55:4,2,0	./.	./.	./.	./.	1/1:1,0:1:2.98:21,3,0	./.	./.	./.	./.
chr10	91496105	.	CAA	C	2395	PASS	AB=0.926;AC=37;AF=0.661;AN=56;BaseQRankSum=-2.538;DP=503;FS=15.543;HRun=17;HaplotypeScore=127.6097;InbreedingCoeff=0.3547;MQ=58.57;MQ0=32;MQRankSum=1.308;QD=7.60;ReadPosRankSum=4.525;VQSLOD=-0.3489;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:30.17:0,30,178	0/0:8,0:8:20.58:0,21,136	0/0:55,0:15:9.14:0,9,42	0/0:58,0:20:5.87:0,6,34	1/1:28,4:31:48.73:434,49,0	1/1:22,1:20:5.77:98,6,0	1/1:6,0:6:0.20:14,0,0	1/1:15,1:16:13.45:88,13,0	0/1:10,0:10:19.90:76,0,20	1/1:20,0:17:9.90:85,10,0	1/1:12,0:12:0.60:13,1,0	0/1:6,1:7:10.81:80,0,11	1/1:7,0:6:5.34:27,5,0	1/1:13,0:13:2.59:198,3,0	0/0:7,0:7:14.80:0,15,97	0/0:6,0:6:0:0,0,0	0/0:29,0:27:43.49:0,43,368	1/1:9,0:10:0.42:26,0,0	1/1:22,1:19:32.17:238,32,0	1/1:17,2:18:11.49:285,11,0	1/1:8,0:5:7.64:59,8,0	1/1:4,0:3:2.86:16,3,0	0/1:10,0:9:15.41:15,0,39	1/1:8,0:8:10.93:39,11,0	0/1:21,0:21:10.77:81,0,11	0/1:16,4:18:11.32:153,0,11	1/1:25,2:27:37.75:287,38,0	1/1:15,2:17:37.50:255,37,0
chr10	91496118	.	AAAAAC	A	2132.21	PASS	AB=0.988;AC=31;AF=0.554;AN=56;BaseQRankSum=-4.473;DP=516;FS=49.285;HRun=0;HaplotypeScore=158.4961;InbreedingCoeff=-0.4549;MQ=51.33;MQ0=34;MQRankSum=2.016;QD=4.66;ReadPosRankSum=-2.826;VQSLOD=0.6123;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:71.73:74,0,72	0/1:10,0:10:17.22:17,0,122	0/1:51,0:9:8.10:8,0,31	0/0:47,0:10:3.24:0,3,74	1/1:30,2:31:14.28:366,14,0	0/1:23,0:20:33.64:58,0,34	0/1:7,0:8:13.90:35,0,14	0/1:29,1:29:56.70:218,0,57	0/1:12,0:12:32.61:60,0,33	0/1:21,0:18:52.08:52,0,57	1/1:11,0:11:5.56:53,6,0	0/1:8,0:8:14.44:65,0,14	0/0:6,0:5:8.05:0,8,36	0/1:13,0:13:22.22:121,0,22	0/1:8,0:8:20.07:20,0,49	1/1:7,0:7:1.92:8,2,0	0/1:30,1:29:51.69:52,0,338	0/1:11,0:11:8.30:8,0,25	0/1:19,1:16:10.24:145,0,10	0/1:22,1:22:22.74:283,0,23	1/1:9,0:6:6.32:59,6,0	0/0:5,0:4:3.56:0,4,13	0/1:9,0:9:25.94:26,0,61	1/1:9,0:9:13.69:100,14,0	0/1:20,0:18:47.22:47,0,51	0/1:23,0:20:78.58:105,0,79	0/1:24,2:26:42.27:190,0,42	1/1:21,0:21:11.07:119,11,0
chr10	91496122	.	AC	A	5959.91	PASS	AB=0.897;AC=52;AF=0.929;AN=56;BaseQRankSum=-0.647;DP=500;FS=7.989;HRun=1;HaplotypeScore=119.1902;InbreedingCoeff=-0.0256;MQ=53.96;MQ0=34;MQRankSum=-2.805;QD=11.92;ReadPosRankSum=1.244;VQSLOD=2.9691;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:53.16:367,53,0	1/1:8,1:9:25.08:161,25,0	0/1:46,1:8:12.79:34,0,13	0/1:41,1:11:9.59:10,0,44	1/1:17,11:27:51.61:484,52,0	1/1:5,8:19:32.68:245,33,0	1/1:1,6:8:17.10:118,17,0	0/1:22,4:25:1.61:192,0,2	1/1:7,5:12:35.24:275,35,0	1/1:17,4:18:44.20:287,44,0	1/1:7,3:10:25.72:183,26,0	1/1:7,3:10:6.58:157,7,0	1/1:1,5:5:8.77:58,9,0	1/1:4,9:13:36.34:323,36,0	1/1:8,0:8:18.08:104,18,0	1/1:0,6:6:2.49:9,2,0	1/1:30,1:29:63.49:405,63,0	1/1:4,7:11:4.64:42,5,0	1/1:10,10:16:9.49:240,9,0	1/1:12,11:22:28.69:413,29,0	1/1:7,4:8:16.11:147,16,0	1/1:2,1:5:4.33:23,4,0	0/1:8,2:10:12.68:112,0,13	1/1:9,1:10:23.63:161,24,0	1/1:14,5:17:45.52:345,46,0	1/1:9,10:16:19.73:208,20,0	1/1:8,18:26:44.63:511,45,0	1/1:6,16:22:18.46:348,18,0
chr10	91496123	.	C	CA	4133.83	PASS	AB=0.987;AC=43;AF=0.768;AN=56;BaseQRankSum=-4.357;DP=500;FS=4.999;HRun=17;HaplotypeScore=126.5114;InbreedingCoeff=0.1202;MQ=52.86;MQ0=33;MQRankSum=-1.993;QD=9.40;ReadPosRankSum=-1.618;VQSLOD=1.3785;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:9.71:15,0,10	0/0:9,0:9:9.82:0,10,49	0/1:46,0:7:19.96:20,0,30	0/0:42,0:11:0.88:0,1,40	1/1:27,1:27:26.26:454,26,0	1/1:21,0:19:14.40:167,14,0	1/1:8,0:8:12.33:91,12,0	1/1:14,12:25:7.91:434,8,0	1/1:11,2:13:15.13:237,15,0	1/1:19,2:18:24.17:185,24,0	1/1:10,0:10:13.98:107,14,0	1/1:9,1:10:7.49:163,7,0	1/1:6,0:5:7.19:52,7,0	1/1:13,0:13:19.84:266,20,0	0/0:9,0:9:3.96:0,4,23	1/1:6,0:6:3.01:31,3,0	0/1:31,0:29:29.72:30,0,65	0/1:11,0:11:18.84:31,0,19	0/1:18,2:16:16.20:240,0,16	1/1:21,2:22:10.51:373,11,0	1/1:10,0:8:14.94:128,15,0	1/1:6,0:5:2.84:14,3,0	0/1:11,0:10:22.16:22,0,28	1/1:9,1:10:12.11:75,12,0	1/1:19,0:17:9.03:106,9,0	0/1:20,0:17:1.78:163,0,2	1/1:22,4:26:27.67:412,28,0	1/1:22,0:22:6.59:319,7,0
chr10	91496125	.	AC	A	6455.37	PASS	AB=0.976;AC=53;AF=0.946;AN=56;BaseQRankSum=-1.140;DP=490;FS=17.243;HRun=1;HaplotypeScore=115.9034;InbreedingCoeff=0.4652;MQ=53.43;MQ0=33;MQRankSum=-1.769;QD=14.41;ReadPosRankSum=1.041;VQSLOD=3.2858;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:51.63:352,52,0	1/1:10,0:10:24.56:166,25,0	0/0:37,3:7:8.85:0,9,106	0/1:39,1:11:11.49:11,0,51	1/1:27,0:26:64.91:571,65,0	1/1:17,5:19:32.60:235,33,0	1/1:6,1:7:14.83:116,15,0	1/1:24,0:23:34.54:220,35,0	1/1:13,0:13:33.99:271,34,0	1/1:17,3:17:45.48:337,45,0	1/1:7,1:8:22.31:145,22,0	1/1:10,0:10:22.92:173,23,0	1/1:5,2:6:11.79:81,12,0	1/1:13,0:13:35.42:333,35,0	1/1:8,0:8:17.32:94,17,0	1/1:7,0:7:5.90:43,6,0	1/1:33,0:31:71.03:459,71,0	1/1:9,1:10:7:45,7,0	1/1:20,0:16:26.21:286,26,0	1/1:23,0:22:42.70:474,43,0	1/1:10,0:8:17.31:153,17,0	1/1:5,1:5:3.43:20,3,0	1/1:9,2:10:16.87:122,17,0	1/1:9,1:10:23.76:174,24,0	1/1:15,4:17:45.77:359,46,0	1/1:21,0:18:35.95:281,36,0	1/1:26,0:26:55.22:555,55,0	1/1:22,0:22:38.89:380,39,0
chr10	91496267	.	C	CTT	6032.87	PASS	AB=0.625;AC=21;AF=0.375;AN=56;BaseQRankSum=-6.595;DP=559;FS=2.242;HRun=8;HaplotypeScore=75.9588;InbreedingCoeff=0.8781;MQ=70.03;MQ0=0;MQRankSum=-0.199;QD=33.89;ReadPosRankSum=1.413;VQSLOD=5.0410;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,1083	0/0:5,0:5:9.02:0,9,100	0/0:16,0:14:11.89:0,12,253	0/0:20,0:20:39.01:0,39,411	0/0:20,0:19:33.05:0,33,367	1/1:1,15:17:47.65:720,48,0	1/1:3,17:20:48.16:762,48,0	0/0:45,0:45:99:0,105,1161	0/0:21,0:21:60.16:0,60,669	1/1:1,15:16:42.13:629,42,0	1/1:1,13:14:39.09:576,39,0	0/0:19,0:19:54.13:0,54,592	1/1:5,14:19:36.10:545,36,0	0/0:19,0:19:51.11:0,51,559	0/0:27,0:27:78.21:0,78,868	1/1:2,12:15:32.60:485,33,0	0/0:32,0:32:87.23:0,87,966	1/1:2,10:13:27.05:401,27,0	0/0:22,0:22:45.06:0,45,481	0/0:11,0:11:33.09:0,33,368	0/0:30,0:30:84.19:0,84,923	0/1:4,5:10:42.83:215,0,43	1/1:1,8:8:18.06:286,18,0	1/1:3,22:28:65.20:970,65,0	1/1:4,13:17:1.88:445,2,0	0/0:15,0:15:39.09:0,39,428	0/0:28,0:27:78.17:0,78,857	0/0:15,0:15:21.03:0,21,233
chr10	91496977	.	C	CT	4953.76	PASS	AB=0.587;AC=21;AF=0.375;AN=56;BaseQRankSum=4.672;DP=461;FS=0.000;HRun=9;HaplotypeScore=48.2871;InbreedingCoeff=0.8478;MQ=49.50;MQ0=14;MQRankSum=-0.158;QD=22.31;ReadPosRankSum=0.170;VQSLOD=5.1960;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:56.99:0,57,494	0/0:1,0:1:3:0,3,26	0/0:6,0:3:9:0,9,78	0/0:4,0:1:3:0,3,26	0/1:8,19:26:0.97:447,0,1	0/0:17,0:16:38.95:0,39,332	0/0:9,0:7:11.99:0,12,104	1/1:7,25:29:40.05:644,40,0	1/1:6,12:15:30.08:332,30,0	0/0:14,0:14:38.99:0,39,339	0/0:13,0:13:32.99:0,33,286	1/1:2,8:10:19.99:230,20,0	0/0:15,0:13:26.92:0,27,226	1/1:4,11:14:4.05:273,4,0	0/0:19,0:19:47.99:0,48,417	0/0:12,0:12:32.99:0,33,287	0/0:40,0:38:65.92:0,66,566	0/0:28,0:26:44.95:0,45,384	1/1:4,23:25:69.19:763,69,0	1/1:2,11:12:30.08:332,30,0	1/1:3,10:12:21.06:232,21,0	0/0:2,0:2:6:0,6,52	0/0:8,0:7:15:0,15,130	0/0:5,0:5:8.99:0,9,76	0/0:22,0:21:47.98:0,48,417	1/1:5,22:26:63.16:689,63,0	1/1:2,18:18:42.05:449,42,0	1/1:1,19:20:51.01:563,51,0
chr10	91497217	.	CCTCT	C	6434.53	PASS	AB=0.512;AC=21;AF=0.375;AN=56;BaseQRankSum=6.791;DP=618;FS=12.519;HRun=0;HaplotypeScore=114.4868;InbreedingCoeff=0.8836;MQ=64.81;MQ0=8;MQRankSum=-0.700;QD=36.98;ReadPosRankSum=4.436;VQSLOD=4.6469;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,111,2748	0/0:3,0:3:6.02:0,6,155	0/0:34,0:25:54.14:0,54,1198	0/0:47,0:35:75.66:0,76,1546	0/0:15,0:15:27.09:0,27,664	1/1:3,12:14:24.08:428,24,0	1/1:4,13:17:30.10:538,30,0	0/0:29,0:29:68.74:0,69,1667	0/0:18,0:18:51.18:0,51,1254	1/1:3,18:19:51.17:913,51,0	1/1:1,7:7:9.03:161,9,0	0/0:26,0:26:57.06:0,57,1440	1/1:2,15:17:39.60:686,40,0	0/0:25,0:25:63.22:0,63,1601	0/0:25,0:25:54.19:0,54,1394	0/1:1,21:22:26.39:808,0,26	0/0:31,0:31:81.28:0,81,1980	1/1:0,16:16:36.12:646,36,0	0/0:22,0:21:51.18:0,51,1319	0/0:16,0:16:45.15:0,45,1141	0/0:44,0:44:99:0,114,2822	1/1:1,9:10:21.07:375,21,0	1/1:0,3:3:6.02:108,6,0	1/1:3,27:30:63.21:1129,63,0	1/1:2,13:15:36.12:643,36,0	0/0:30,0:31:93.11:0,93,2304	0/0:20,0:20:57.20:0,57,1434	0/0:14,0:14:42.14:0,42,1022
chr10	91497399	.	A	AC	28614.34	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.864;DP=727;FS=8.695;HRun=0;HaplotypeScore=65.6603;InbreedingCoeff=0.9989;MQ=61.06;MQ0=2;MQRankSum=5.772;QD=42.84;ReadPosRankSum=6.143;VQSLOD=4.6414;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:41:99:1772,111,0	1/1:0,15:15:42.14:668,42,0	0/0:27,0:22:65.69:0,66,858	0/0:32,0:28:81.25:0,81,1112	1/1:0,30:30:78.27:1244,78,0	1/1:1,26:27:78.27:1244,78,0	1/1:2,20:22:54.18:862,54,0	1/1:2,29:31:90.30:1402,90,0	1/1:0,23:23:54.18:862,54,0	1/1:1,24:25:72.25:1141,72,0	1/1:0,25:24:63.21:998,63,0	1/1:0,21:21:63.21:1004,63,0	1/1:0,28:28:69.24:1100,69,0	1/1:2,18:20:48.16:767,48,0	1/1:1,32:33:81.26:1293,81,0	1/1:0,40:40:99:1868,117,0	1/1:0,30:30:78.27:1245,78,0	1/1:0,28:28:75.26:1196,75,0	1/1:1,14:14:42.14:670,42,0	1/1:0,25:25:69.24:1099,69,0	1/1:0,17:17:48.16:766,48,0	1/1:1,24:25:66.22:1053,66,0	1/1:1,28:29:81.28:1290,81,0	1/1:0,33:33:72.25:1149,72,0	1/1:0,16:16:45.15:713,45,0	1/1:1,31:32:93.28:1436,93,0	1/1:0,29:29:87.30:1389,87,0	1/1:0,8:8:24.08:383,24,0
chr10	91497925	.	ACAGTGGTGTCTTGT	A	21315.74	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.540;DP=693;FS=0.000;HRun=0;HaplotypeScore=337.6049;InbreedingCoeff=0.6911;MQ=73.54;MQ0=1;MQRankSum=-7.647;QD=34.00;ReadPosRankSum=7.329;VQSLOD=2.4565;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:35,19:54:33.11:1164,33,0	1/1:4,3:7:9.03:352,9,0	0/0:30,0:31:32.74:0,33,1373	0/0:35,0:31:42.38:0,42,1775	1/1:12,6:18:9.03:239,9,0	1/1:11,0:19:21.07:685,21,0	1/1:14,0:21:6.02:196,6,0	1/1:14,0:14:6.02:95,6,0	1/1:16,21:37:51.14:1986,51,0	1/1:8,0:17:15.05:489,15,0	1/1:12,0:17:12.04:391,12,0	1/1:18,26:44:63.22:2462,63,0	1/1:8,0:19:27.09:870,27,0	1/1:16,19:35:54.19:2082,54,0	1/1:14,20:34:54.19:2124,54,0	1/1:16,0:28:30.10:979,30,0	1/1:16,6:22:6.02:236,6,0	1/1:11,0:16:6.02:196,6,0	1/1:13,4:17:9.03:354,9,0	1/1:8,9:17:18.06:577,18,0	1/1:37,9:46:12.04:370,12,0	1/1:9,0:18:9.03:294,9,0	1/1:8,0:20:24.08:783,24,0	1/1:11,0:22:12.04:391,12,0	1/1:12,0:27:35.55:982,36,0	1/1:19,10:29:30.10:1132,30,0	1/1:10,14:24:36.12:1416,36,0	1/1:1,4:5:12.04:472,12,0
chr10	91498894	.	CT	C	2309.95	PASS	AB=0.727;AC=43;AF=0.768;AN=56;BaseQRankSum=-2.126;DP=517;FS=1.598;HRun=16;HaplotypeScore=81.7589;InbreedingCoeff=0.0261;MQ=65.08;MQ0=7;MQRankSum=2.673;QD=4.69;ReadPosRankSum=2.840;VQSLOD=1.9487;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,16:35:8.26:158,0,8	0/1:8,3:10:16.83:27,0,17	0/0:15,0:8:7.60:0,8,39	0/0:9,0:8:4.33:0,4,24	1/1:8,18:28:17.57:248,18,0	1/1:5,1:21:29.06:94,29,0	1/1:0,0:7:14.26:41,14,0	0/1:21,7:27:22.06:71,0,22	0/1:14,0:17:47.35:55,0,47	1/1:7,2:28:39.25:132,39,0	1/1:7,1:16:13.01:47,13,0	0/1:9,6:14:16.06:26,0,16	1/1:5,0:10:16.37:64,16,0	0/1:12,6:18:8.07:70,0,8	1/1:6,12:19:22.39:131,22,0	1/1:0,1:16:23.28:77,23,0	1/1:7,15:23:8.24:148,8,0	1/1:5,0:15:2.35:23,2,0	0/1:10,10:22:31.03:147,0,31	0/1:7,16:25:31.97:145,0,32	1/1:4,2:7:10.14:59,10,0	1/1:5,1:16:20.28:59,20,0	1/1:5,0:22:9.79:68,10,0	1/1:1,0:14:18.31:53,18,0	1/1:2,1:14:21.24:71,21,0	1/1:7,10:17:29.30:179,29,0	0/1:19,6:27:2.50:137,0,3	1/1:2,15:18:15.90:136,16,0
chr10	91499921	.	ACC	A	4236.27	PASS	AB=0.889;AC=36;AF=0.643;AN=56;BaseQRankSum=4.908;DP=582;FS=25.721;HRun=2;HaplotypeScore=76.3593;InbreedingCoeff=-0.3614;MQ=33.66;MQ0=83;MQRankSum=1.806;QD=7.58;ReadPosRankSum=2.515;VQSLOD=0.1713;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:26:43.77:44,0,108	0/1:3,1:4:20.83:46,0,21	0/1:36,1:9:31:31,0,51	0/1:49,1:12:6.98:43,0,7	1/1:14,11:22:15.49:310,15,0	0/1:16,5:17:11.96:228,0,12	1/1:19,1:16:10.87:198,11,0	0/1:22,4:21:61.50:224,0,61	1/1:10,1:9:14.85:126,15,0	1/1:16,4:13:23.96:268,24,0	1/1:16,3:16:43.52:373,44,0	1/1:11,1:9:19.55:206,20,0	0/1:9,1:9:0.64:72,0,1	0/1:6,3:9:7.18:78,0,7	0/0:23,0:21:13.61:0,14,111	0/1:10,4:9:0.24:89,0,0	0/1:34,1:22:80.91:95,0,81	0/1:19,2:14:32:32,0,97	0/1:19,5:15:7.40:230,0,7	0/1:19,3:19:33.57:155,0,34	0/1:9,1:6:15.18:34,0,15	0/1:10,0:8:31.96:85,0,32	0/1:13,2:14:14.26:130,0,14	1/1:14,0:4:5.96:55,6,0	0/1:17,8:21:46.38:242,0,46	1/1:23,5:21:25.08:461,25,0	1/1:14,4:17:3.91:198,4,0	0/1:28,0:16:17.24:181,0,17
chr10	91499923	.	C	CAAAAA	5741.08	PASS	AB=0.990;AC=54;AF=0.964;AN=56;BaseQRankSum=-2.349;DP=588;FS=15.199;HRun=14;HaplotypeScore=101.3052;InbreedingCoeff=0.0884;MQ=38.70;MQ0=73;MQRankSum=0.347;QD=9.76;ReadPosRankSum=1.963;VQSLOD=0.0528;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,12:30:18.06:366,18,0	1/1:4,0:4:6.02:94,6,0	0/1:40,0:12:3.60:4,0,63	0/1:50,0:13:31.15:31,0,66	1/1:22,1:22:30.34:320,30,0	1/1:21,0:17:19.70:210,20,0	1/1:19,2:17:25.17:268,25,0	1/1:26,0:21:23.19:321,23,0	1/1:10,0:9:14.50:127,14,0	1/1:20,0:13:22.64:273,23,0	1/1:18,1:16:39.58:565,40,0	1/1:12,0:9:16.41:104,16,0	1/1:10,0:9:7.36:103,7,0	1/1:9,0:9:8.28:50,8,0	1/1:11,0:22:3.48:53,3,0	1/1:14,1:10:17.70:144,18,0	1/1:27,3:22:33.07:570,33,0	1/1:20,0:14:6.01:65,6,0	1/1:18,6:18:37.17:376,37,0	1/1:15,0:19:20.99:288,21,0	1/1:10,0:6:5.88:52,6,0	1/1:9,1:8:11.86:143,12,0	1/1:14,0:14:15.04:209,15,0	1/1:15,0:5:6.02:85,6,0	1/1:24,1:22:22.40:229,22,0	1/1:28,0:21:40.21:376,40,0	1/1:18,0:17:13.36:119,13,0	1/1:27,0:16:19.20:196,19,0
chr10	91499937	.	ACCAC	A	266.31	PASS	AB=0.923;AC=14;AF=0.250;AN=56;BaseQRankSum=1.914;DP=428;FS=32.685;HRun=0;HaplotypeScore=89.5274;InbreedingCoeff=-0.3194;MQ=63.66;MQ0=21;MQRankSum=-6.367;QD=1.37;ReadPosRankSum=-3.329;VQSLOD=-0.4953;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:25:13.57:14,0,553	0/1:3,2:5:45.61:46,0,165	0/0:43,0:18:4.12:0,4,457	0/0:53,0:21:46.33:0,46,718	0/1:14,0:15:57.56:58,0,577	0/1:8,0:5:5.39:5,0,173	0/1:16,1:16:7.01:7,0,765	0/1:20,0:18:10.40:10,0,778	0/0:9,0:9:20.91:0,21,322	0/1:17,1:15:12.55:13,0,824	0/1:17,1:15:58.28:58,0,548	0/0:8,0:8:19.99:0,20,337	0/0:9,0:9:21.07:0,21,432	0/0:8,0:9:21.07:0,21,436	0/0:18,0:18:27.09:0,27,553	0/0:9,0:8:24.08:0,24,529	0/1:15,2:15:72.75:73,0,615	0/0:4,0:3:6.01:0,6,94	0/0:21,0:16:23.18:0,23,929	0/0:16,0:15:32.96:0,33,553	0/1:6,1:4:2.75:3,0,116	0/0:11,0:10:30.10:0,30,663	0/1:5,0:5:9.32:9,0,142	0/1:7,1:6:31.50:32,0,117	0/0:11,0:11:21.07:0,21,420	0/1:11,1:12:57.84:58,0,599	0/1:15,0:15:28.77:29,0,457	0/0:9,0:8:13.33:0,13,388
chr10	91503826	.	TGCCACCGTGTGA	T	15450.91	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.532;DP=636;FS=5.165;HRun=0;HaplotypeScore=250.1993;InbreedingCoeff=0.9808;MQ=69.53;MQ0=0;MQRankSum=-17.141;QD=72.54;ReadPosRankSum=3.226;VQSLOD=4.1222;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,6570	0/0:7,0:7:18.06:0,18,1127	0/0:15,0:15:45.15:0,45,2116	0/0:21,0:20:52.63:0,53,2755	0/0:31,0:31:93.32:0,93,5585	1/1:2,32:34:75.26:2890,75,0	1/1:0,7:7:6.02:230,6,0	0/0:37,0:37:99:0,111,5468	0/0:19,0:19:57.20:0,57,3567	1/1:8,17:25:39.07:1296,39,0	1/1:2,17:19:42.14:1608,42,0	0/0:22,0:22:66.23:0,66,3964	1/1:2,20:22:39.13:1497,39,0	0/0:27,0:27:81.28:0,81,4979	0/0:22,0:22:66.21:0,66,3969	1/1:3,14:17:36.12:1387,36,0	0/0:34,0:34:99:0,102,6335	1/1:3,19:22:27.09:1000,27,0	0/0:22,0:22:63.21:0,63,3404	0/0:23,0:23:66.23:0,66,3507	0/0:28,0:28:84.29:0,84,5042	1/1:1,8:9:15.05:577,15,0	1/1:1,12:13:33.11:1250,33,0	1/1:3,13:16:21.54:803,22,0	1/1:2,27:29:78.27:2912,78,0	0/0:25,0:25:75.26:0,75,4445	0/0:35,0:33:99:0,105,6208	0/0:17,0:17:51.16:0,51,2743
chr10	91504556	.	A	AG	7009.17	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-1.726;DP=606;FS=5.639;HRun=6;HaplotypeScore=91.6295;InbreedingCoeff=0.9320;MQ=73.65;MQ0=0;MQRankSum=-0.770;QD=29.20;ReadPosRankSum=0.854;VQSLOD=5.2042;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,1181	0/0:5,0:5:15.03:0,15,153	0/0:10,0:12:21.62:0,22,239	0/0:13,0:12:16.81:0,17,242	0/0:10,0:10:30.07:0,30,306	1/1:1,24:25:69.22:867,69,0	1/1:6,26:32:72.23:906,72,0	0/0:10,0:10:24.05:0,24,245	0/0:31,0:31:87.15:0,87,875	1/1:2,13:15:39.12:488,39,0	1/1:1,12:13:29.79:377,30,0	0/0:30,0:30:75.16:0,75,765	1/1:1,20:21:57.18:717,57,0	0/0:27,0:27:69.15:0,69,704	0/0:22,0:22:66.14:0,66,667	1/1:4,17:21:48.15:603,48,0	0/0:25,0:25:60.13:0,60,612	1/1:3,23:26:66.21:828,66,0	0/0:15,0:15:39.07:0,39,391	0/1:10,0:10:7.68:8,0,238	0/0:71,0:71:99:0,174,1773	1/1:2,14:16:32.94:414,33,0	1/1:1,11:12:27.09:340,27,0	1/1:4,27:31:75.24:934,75,0	1/1:1,17:18:42.13:528,42,0	0/0:19,0:19:45.10:0,45,459	0/0:23,0:23:57.12:0,57,581	0/0:11,0:11:33.08:0,33,337
chr10	91506307	.	GT	G	6734.09	PASS	AB=0.736;AC=22;AF=0.393;AN=56;BaseQRankSum=16.881;DP=693;FS=2.277;HRun=1;HaplotypeScore=93.2206;InbreedingCoeff=0.9071;MQ=64.69;MQ0=9;MQRankSum=-1.788;QD=25.13;ReadPosRankSum=2.281;VQSLOD=4.9844;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,129,1987	0/0:7,0:7:21.07:0,21,333	0/0:27,0:24:72.04:0,72,1012	0/0:32,0:24:59.35:0,59,941	1/1:0,20:19:48.11:598,48,0	0/0:22,0:22:63.21:0,63,987	0/0:39,0:39:99:0,111,1678	1/1:1,15:15:35.98:383,36,0	1/1:0,17:16:42.14:540,42,0	0/0:24,0:24:72.24:0,72,1124	0/0:10,0:10:27.09:0,27,422	1/1:1,31:32:78.25:998,78,0	0/0:20,0:20:60.20:0,60,959	1/1:1,19:20:48.15:614,48,0	0/0:29,0:29:81.28:0,81,1284	0/1:27,2:29:4.13:4,0,984	0/0:41,0:41:99:0,123,1872	0/0:31,0:31:87.30:0,87,1381	1/1:1,13:12:31.99:310,32,0	1/1:0,17:17:42.05:507,42,0	1/1:1,31:32:47.22:761,47,0	0/0:22,0:22:63.21:0,63,959	0/0:16,0:16:45.15:0,45,709	0/0:43,0:43:99:0,124,1916	0/0:14,0:14:39.13:0,39,603	0/1:3,19:21:0.22:473,0,0	1/1:0,26:24:57.18:737,57,0	1/1:1,22:22:63.20:810,63,0
chr10	91506516	.	GT	G	2314.48	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=-2.453;DP=500;FS=1.845;HRun=6;HaplotypeScore=188.2983;InbreedingCoeff=0.7643;MQ=52.32;MQ0=1;MQRankSum=-1.164;QD=10.57;ReadPosRankSum=6.590;VQSLOD=0.4288;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:37:70.29:0,70,419	0/0:5,0:6:15.19:0,15,99	0/0:17,0:15:8.88:0,9,184	0/0:14,0:10:8.78:0,9,127	1/1:25,0:24:29.90:307,30,0	0/0:15,0:14:28.72:0,29,204	0/0:16,0:16:29.96:0,30,185	1/1:27,0:25:19.90:267,20,0	1/1:19,1:20:43.19:327,43,0	0/0:17,0:15:21.31:0,21,145	0/0:19,0:18:28.21:0,28,172	1/1:15,2:17:24.40:277,24,0	0/0:10,0:9:18.15:0,18,115	1/1:14,0:14:17.84:170,18,0	0/0:24,0:25:57.36:0,57,341	0/0:13,0:13:34.18:0,34,224	0/0:22,0:23:29.12:0,29,212	0/0:16,0:14:25.68:0,26,193	1/1:27,2:29:54.66:451,55,0	1/1:20,0:21:20.04:211,20,0	0/1:10,0:10:8.72:21,0,9	0/0:14,0:14:24.02:0,24,138	0/0:14,0:14:10.87:0,11,112	0/0:10,0:10:11.77:0,12,90	0/0:14,0:14:29.93:0,30,201	1/1:21,2:22:1.45:220,1,0	1/1:23,0:23:1.51:191,2,0	0/1:9,0:9:7.13:74,0,7
chr10	91506520	.	T	TTG	2715.20	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-5.880;DP=493;FS=1.698;HRun=0;HaplotypeScore=212.8278;InbreedingCoeff=0.5312;MQ=55.43;MQ0=1;MQRankSum=-1.488;QD=8.76;ReadPosRankSum=5.582;VQSLOD=3.4071;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:37:16.78:17,0,273	0/1:6,0:6:12.07:12,0,47	0/0:17,0:15:27.89:0,28,312	0/0:16,0:12:12.24:0,12,159	1/1:22,2:23:19.43:473,19,0	0/0:15,0:14:19.80:0,20,207	0/0:15,0:15:38.96:0,39,259	1/1:22,2:22:14.94:434,15,0	1/1:19,0:19:30.91:206,31,0	0/0:17,0:15:37.15:0,37,256	0/1:18,0:17:3.39:3,0,175	1/1:17,0:17:30.62:171,31,0	0/1:10,0:9:6.39:6,0,94	1/1:14,0:14:17.97:73,18,0	0/0:24,0:24:25.46:0,25,288	0/0:13,0:13:30.90:0,31,203	0/0:22,0:22:14.38:0,14,229	0/1:17,0:15:4.73:5,0,163	1/1:29,0:29:42.35:450,42,0	1/1:19,0:18:41.29:277,41,0	1/1:9,0:9:3.86:18,4,0	0/0:14,0:14:13.23:0,13,158	0/0:15,0:15:20.61:0,21,226	0/1:10,0:10:27.01:27,0,56	0/0:15,0:15:40.54:0,41,263	1/1:23,0:22:19.87:298,20,0	1/1:20,2:23:24.17:357,24,0	0/1:10,0:10:7.31:91,0,7
chr10	91506521	.	TTG	T	5006.66	PASS	AB=0.968;AC=34;AF=0.607;AN=56;BaseQRankSum=-3.607;DP=476;FS=2.791;HRun=0;HaplotypeScore=184.3133;InbreedingCoeff=0.0266;MQ=54.74;MQ0=1;MQRankSum=-0.752;QD=11.81;ReadPosRankSum=0.576;VQSLOD=4.3140;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:37:16.91:17,0,207	0/1:6,0:6:5.28:5,0,51	0/1:11,0:15:7.73:8,0,185	0/0:15,0:11:6.44:0,6,139	1/1:7,6:21:38.75:520,39,0	0/0:14,0:13:19.11:0,19,183	0/1:14,0:14:30.59:31,0,123	1/1:10,4:20:35.19:477,35,0	1/1:6,9:19:49:556,49,0	0/1:17,0:15:28.85:29,0,112	0/1:18,0:17:35.78:36,0,111	1/1:8,8:18:50.70:535,51,0	0/0:10,0:9:15.59:0,16,94	1/1:0,12:14:22.84:291,23,0	0/1:24,0:24:36.35:36,0,215	0/0:13,0:13:24.97:0,25,160	0/1:22,0:22:0.54:1,0,146	0/1:17,0:15:47.07:47,0,101	1/1:9,8:28:82.20:820,82,0	1/1:8,4:16:40.66:364,41,0	1/1:7,1:8:0.14:49,0,0	0/1:14,0:14:14.17:14,0,96	0/1:15,0:15:35.72:36,0,69	0/1:9,0:9:4.40:4,0,45	0/1:15,0:15:56.85:57,0,125	1/1:10,6:20:27.19:483,27,0	1/1:11,5:20:35.65:437,36,0	0/1:5,2:9:2.67:155,0,3
chr10	91506522	.	TGG	T	7021.56	PASS	AB=0.933;AC=53;AF=0.946;AN=56;BaseQRankSum=-2.229;DP=448;FS=0.898;HRun=2;HaplotypeScore=174.5538;InbreedingCoeff=0.4341;MQ=55.42;MQ0=1;MQRankSum=-1.916;QD=16.29;ReadPosRankSum=1.383;VQSLOD=2.3130;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,6:33:64.27:472,64,0	1/1:3,2:5:12:87,12,0	0/0:17,0:15:4.41:0,4,214	0/1:13,0:10:15.20:15,0,93	1/1:19,3:21:52.01:446,52,0	1/1:11,1:11:11.15:66,11,0	1/1:12,2:14:22.44:190,22,0	1/1:19,3:20:52.20:427,52,0	1/1:16,2:18:47.26:378,47,0	1/1:10,4:12:17.02:168,17,0	1/1:12,2:13:24.33:219,24,0	1/1:14,4:18:53.62:488,54,0	1/1:10,0:9:13.53:74,14,0	1/1:14,0:14:22.21:182,22,0	1/1:18,3:21:32.59:314,33,0	1/1:13,0:13:23.48:161,23,0	1/1:21,1:22:29.38:217,29,0	1/1:15,1:14:27.95:251,28,0	1/1:24,4:28:81.79:650,82,0	1/1:15,1:15:41.09:300,41,0	1/1:6,1:7:11.51:85,12,0	1/1:8,3:11:21.31:172,21,0	1/1:11,3:14:22.74:215,23,0	1/1:8,0:8:6.78:74,7,0	1/1:10,2:12:17.48:250,17,0	1/1:19,2:20:49.90:412,50,0	1/1:16,6:22:56.09:535,56,0	1/1:5,4:9:17.11:172,17,0
chr10	91509170	.	CTGTG	C	2733.21	PASS	AB=0.750;AC=23;AF=0.426;AN=54;BaseQRankSum=2.417;DP=646;FS=0.000;HRun=0;HaplotypeScore=124.8926;InbreedingCoeff=0.5973;MQ=61.19;MQ0=21;MQRankSum=0.477;QD=10.09;ReadPosRankSum=2.852;VQSLOD=2.8861;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:27:3:27,3,0	./.	0/0:51,0:17:3.37:0,3,17	0/0:60,0:24:2.96:0,3,19	0/0:10,0:13:9.02:0,9,144	1/1:10,9:19:18.06:284,18,0	1/1:7,14:23:34.72:507,35,0	0/0:28,0:30:42:0,42,721	0/0:14,0:21:11.18:0,11,180	1/1:14,3:20:18.03:222,18,0	1/1:4,3:7:9.03:141,9,0	0/0:21,0:31:23.87:0,24,437	1/1:10,8:20:23.64:335,24,0	0/0:16,0:27:24.05:0,24,375	1/1:16,0:29:26.49:230,26,0	1/1:12,6:20:17.96:215,18,0	0/1:21,0:24:37.19:76,0,37	0/1:11,7:18:32.31:285,0,32	0/0:12,0:12:9.03:0,9,167	0/0:8,0:11:9.03:0,9,195	0/0:30,0:46:33.16:0,33,709	1/1:13,4:17:3.01:47,3,0	0/0:6,2:8:0:0,0,0	0/1:15,14:30:33.78:414,0,34	1/1:12,3:15:9.03:142,9,0	0/0:20,0:24:15.05:0,15,257	0/0:9,0:17:21.92:0,22,351	0/0:13,0:20:21.07:0,21,415
chr10	91512444	.	AT	A	8422.98	PASS	AB=0.767;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.904;DP=619;FS=61.524;HRun=12;HaplotypeScore=81.6586;InbreedingCoeff=0.4480;MQ=66.68;MQ0=6;MQRankSum=1.193;QD=13.97;ReadPosRankSum=4.455;VQSLOD=0.0441;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,35:39:69.01:632,69,0	1/1:2,6:8:17.92:139,18,0	0/1:22,0:12:6.08:6,0,97	0/0:16,0:10:20.47:0,20,171	1/1:3,25:28:59.54:464,60,0	1/1:4,16:20:41.82:325,42,0	1/1:4,24:28:65.73:511,66,0	1/1:12,21:32:40.55:348,41,0	1/1:2,14:16:29.87:232,30,0	1/1:3,16:21:48.89:360,49,0	1/1:5,11:16:26.83:206,27,0	1/1:7,23:30:29.29:409,29,0	0/1:6,11:17:0.59:179,0,1	1/1:5,23:29:31.33:416,31,0	1/1:7,13:20:31.92:254,32,0	1/1:9,18:29:43.59:372,44,0	1/1:7,33:41:66.03:677,66,0	1/1:9,22:31:26.79:389,27,0	0/1:14,11:25:46.38:233,0,46	1/1:4,10:14:25.91:190,26,0	1/1:1,13:17:38.99:273,39,0	1/1:6,8:14:23.88:185,24,0	1/1:2,13:16:14.64:278,15,0	1/1:3,18:21:46.85:354,47,0	1/1:2,11:13:29.88:232,30,0	1/1:7,18:24:20.33:341,20,0	1/1:4,11:15:26.88:208,27,0	1/1:1,12:12:26.90:209,27,0
chr10	91513330	.	CA	C	1126.37	PASS	AB=0.797;AC=20;AF=0.357;AN=56;BaseQRankSum=-0.133;DP=687;FS=2.370;HRun=18;HaplotypeScore=95.5806;InbreedingCoeff=0.4449;MQ=66.66;MQ0=5;MQRankSum=2.678;QD=3.46;ReadPosRankSum=6.542;VQSLOD=0.0405;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,2:37:22.62:0,23,389	0/0:7,2:9:2.39:0,2,98	0/1:50,2:18:19.65:20,0,42	0/1:41,0:23:11.82:12,0,24	0/0:25,0:29:40.33:0,40,239	1/1:12,8:20:16.01:114,16,0	0/1:10,5:15:7.83:35,0,8	0/0:18,0:29:47.06:0,47,295	0/0:14,0:16:17.23:0,17,99	1/1:14,4:25:6.95:86,7,0	0/1:8,7:19:6.59:84,0,7	0/0:8,0:24:2.14:0,2,74	1/1:13,4:18:4.74:101,5,0	0/0:17,1:20:10.97:0,11,170	0/0:19,1:22:15.92:0,16,232	1/1:8,11:21:36.83:222,37,0	0/0:33,1:33:21.34:0,21,273	1/1:17,8:29:42.87:200,43,0	0/0:16,0:26:40.14:0,40,240	0/0:17,0:24:25.86:0,26,205	0/0:17,1:18:19.15:0,19,187	1/1:5,15:22:40.04:202,40,0	0/1:7,5:11:4.03:60,0,4	0/1:20,10:32:89.77:90,0,102	1/1:10,7:17:1.35:86,1,0	0/0:31,1:38:47.66:0,48,328	0/0:15,0:16:34.97:0,35,212	0/0:12,0:18:6.87:0,7,83
chr10	91515942	.	GTCTTT	G	2900.06	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-1.255;DP=577;FS=1.550;HRun=0;HaplotypeScore=104.5103;InbreedingCoeff=0.9390;MQ=69.48;MQ0=12;MQRankSum=-1.653;QD=13.68;ReadPosRankSum=-1.607;VQSLOD=3.0558;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:56.55:0,57,612	0/0:11,0:11:20.93:0,21,197	0/0:40,0:19:8.71:0,9,138	0/0:46,0:18:11.86:0,12,196	1/1:7,13:20:44.73:478,45,0	0/0:17,0:17:26.95:0,27,348	0/0:17,0:17:33.09:0,33,689	1/1:31,1:32:32.98:335,33,0	1/1:17,0:17:8.92:102,9,0	0/0:30,0:30:64.05:0,64,1087	0/0:15,0:15:30.01:0,30,530	1/1:7,11:17:9.03:169,9,0	0/0:17,0:17:27.07:0,27,538	1/1:15,1:16:30.01:323,30,0	0/0:15,0:15:33.06:0,33,391	0/0:20,0:20:21.03:0,21,398	0/0:21,0:21:35.81:0,36,386	0/0:20,0:20:18.04:0,18,431	1/1:20,12:32:38.71:389,39,0	1/1:6,10:16:23.82:233,24,0	1/1:4,6:10:17.96:264,18,0	0/0:15,0:15:23.99:0,24,442	0/0:15,0:15:9.03:0,9,208	0/0:9,0:9:8.99:0,9,125	0/0:27,0:27:36.10:0,36,752	1/1:20,0:20:42.01:414,42,0	1/1:4,9:13:8.95:130,9,0	1/1:5,13:18:19.30:282,19,0
chr10	91515960	.	TTTTC	T	2401.11	PASS	AB=0.968;AC=20;AF=0.357;AN=56;BaseQRankSum=-0.528;DP=587;FS=0.414;HRun=0;HaplotypeScore=100.1193;InbreedingCoeff=0.0578;MQ=64.00;MQ0=14;MQRankSum=-0.989;QD=7.67;ReadPosRankSum=-1.283;VQSLOD=2.3505;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:59.40:0,59,439	0/0:14,0:14:24.83:0,25,160	0/0:38,0:15:9.92:0,10,140	0/0:43,0:14:9.22:0,9,174	1/1:18,1:19:14.88:354,15,0	0/0:16,0:16:33.35:0,33,359	0/1:19,0:19:43:43,0,534	0/1:28,0:28:74.55:255,0,75	0/1:7,8:15:21.11:95,0,21	0/1:31,0:31:33.28:33,0,843	0/1:19,0:19:14.51:15,0,430	0/1:20,0:19:27.57:96,0,28	0/0:16,0:16:26.09:0,26,435	1/1:18,0:16:26.18:282,26,0	0/0:17,0:17:37.80:0,38,318	0/1:21,0:21:13.20:13,0,356	0/0:21,0:21:48.89:0,49,305	0/1:26,0:26:10.17:10,0,371	0/1:21,0:21:55.74:284,0,56	0/1:14,0:14:5.74:167,0,6	1/1:8,1:9:17.79:186,18,0	0/0:20,0:20:28.17:0,28,400	0/0:15,0:15:3.51:0,4,160	0/0:17,0:17:9.40:0,9,97	0/0:27,0:27:16.73:0,17,593	0/1:22,1:21:15.88:355,0,16	0/1:13,0:13:35.54:96,0,36	1/1:15,2:17:21.06:296,21,0
chr10	91515964	.	C	CT	1452.17	PASS	AB=0.736;AC=19;AF=0.339;AN=56;BaseQRankSum=-8.297;DP=603;FS=8.444;HRun=15;HaplotypeScore=86.8087;InbreedingCoeff=0.4699;MQ=62.76;MQ0=13;MQRankSum=0.717;QD=4.70;ReadPosRankSum=-1.590;VQSLOD=1.2991;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:30:36.36:0,36,105	0/0:3,0:13:10.13:0,10,29	0/0:35,0:13:1.98:0,2,8	0/1:39,0:11:0:0,0,0	0/0:18,0:18:17.87:0,18,85	0/1:11,8:19:17.52:83,0,18	1/1:14,7:21:13.81:303,14,0	0/0:26,0:27:27.22:0,27,146	0/0:14,0:15:8.80:0,9,46	1/1:14,21:35:34.83:369,35,0	0/1:9,10:20:0.57:90,0,1	0/0:23,0:22:23.97:0,24,115	1/1:16,0:16:25.17:191,25,0	0/0:15,0:14:7.22:0,7,27	0/0:4,0:17:18.28:0,18,53	0/1:7,15:23:21.06:158,0,21	0/0:6,0:20:30.07:0,30,86	1/1:5,21:26:21.76:150,22,0	0/0:24,0:24:28.59:0,29,165	0/0:14,0:15:14:0,14,75	0/0:10,0:11:15.89:0,16,70	0/1:7,11:18:24.69:91,0,25	1/1:10,0:17:5.53:22,6,0	1/1:4,13:17:2.52:45,3,0	0/1:11,17:28:0.03:108,0,0	0/1:27,1:28:20.97:21,0,66	0/0:13,0:13:17.09:0,17,90	0/0:17,0:17:10.63:0,11,42
chr10	91516320	.	GC	G	11290.59	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-6.270;DP=489;FS=2.144;HRun=7;HaplotypeScore=51.2829;InbreedingCoeff=0.6249;MQ=78.30;MQ0=0;MQRankSum=-6.727;QD=23.57;ReadPosRankSum=4.127;VQSLOD=4.9568;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:54.12:551,54,0	1/1:3,5:8:12.03:122,12,0	0/0:10,0:10:27.08:0,27,325	0/1:11,0:11:11.15:11,0,205	1/1:0,8:8:18.04:184,18,0	1/1:2,12:14:27.06:275,27,0	1/1:3,37:40:99:1010,99,0	1/1:0,7:7:18.01:174,18,0	1/1:0,15:15:36.08:367,36,0	1/1:3,18:21:54.09:540,54,0	1/1:1,8:9:21.04:214,21,0	1/1:2,18:20:48.08:490,48,0	1/1:1,11:12:30.06:306,30,0	1/1:2,15:17:33.05:337,33,0	1/1:2,16:18:39.09:398,39,0	1/1:1,19:20:51.12:520,51,0	1/1:0,32:32:89.88:898,90,0	1/1:0,32:33:86.23:863,86,0	1/1:2,12:14:36.06:359,36,0	1/1:2,4:6:9.02:92,9,0	1/1:4,42:46:99:1101,108,0	1/1:2,9:11:27.06:275,27,0	1/1:5,6:11:18.04:184,18,0	1/1:0,23:23:60.14:612,60,0	1/1:1,15:16:36.08:367,36,0	1/1:1,12:13:30.06:306,30,0	1/1:2,18:20:48.11:490,48,0	1/1:1,10:11:24.05:245,24,0
chr10	91518968	.	CCA	C	23007.84	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.180;DP=690;FS=17.855;HRun=0;HaplotypeScore=87.2852;InbreedingCoeff=0.9993;MQ=84.77;MQ0=6;MQRankSum=-10.196;QD=35.56;ReadPosRankSum=5.600;VQSLOD=5.8461;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,44:48:99:1690,123,0	1/1:1,11:12:33.11:454,33,0	0/0:19,0:19:54.15:0,54,881	0/0:24,0:24:57.19:0,57,990	1/1:3,21:23:57.19:782,57,0	1/1:1,30:31:81.27:1113,81,0	1/1:1,32:33:87.29:1196,87,0	1/1:6,18:24:57.19:778,57,0	1/1:1,13:13:33.11:453,33,0	1/1:0,34:34:99:1347,102,0	1/1:1,15:16:42.14:577,42,0	1/1:0,28:28:78.26:1071,78,0	1/1:0,12:12:33.11:453,33,0	1/1:0,15:15:36.12:495,36,0	1/1:2,27:28:75.25:1028,75,0	1/1:3,26:29:75.25:1031,75,0	1/1:1,28:29:87.29:1196,87,0	1/1:1,31:32:75.25:1026,75,0	1/1:3,22:25:66.22:899,66,0	1/1:2,14:16:39.13:536,39,0	1/1:2,40:41:96.32:1319,96,0	1/1:0,22:22:66.22:907,66,0	1/1:3,19:22:51.64:700,52,0	1/1:2,32:33:84.28:1154,84,0	1/1:0,15:14:33.11:454,33,0	1/1:0,25:24:72.24:990,72,0	1/1:1,17:18:54.18:741,54,0	1/1:3,15:18:45.15:618,45,0
chr10	91519103	.	C	CGT	3804.35	PASS	AB=0.747;AC=36;AF=0.692;AN=52;BaseQRankSum=0.838;DP=515;FS=6.031;HRun=0;HaplotypeScore=103.3317;InbreedingCoeff=-0.3564;MQ=60.83;MQ0=6;MQRankSum=0.331;QD=8.31;ReadPosRankSum=0.319;VQSLOD=3.0366;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:3:25,3,0	1/1:6,0:6:2.98:21,3,0	./.	./.	0/1:21,3:24:8.41:244,0,8	0/1:8,12:21:88.79:194,0,89	0/1:11,8:19:70.84:77,0,71	0/0:26,0:26:12.49:0,12,91	0/1:7,2:8:34.42:81,0,34	0/1:18,9:26:9.93:295,0,10	1/1:6,4:10:8.87:138,9,0	0/1:5,7:12:29.45:168,0,29	0/1:5,2:7:37.03:37,0,59	1/1:3,5:8:9.02:128,9,0	1/1:15,0:15:2.52:24,3,0	0/1:7,3:10:54.16:54,0,87	1/1:25,0:25:9.64:61,10,0	0/1:15,16:34:54.76:249,0,55	1/1:16,5:21:5.22:218,5,0	0/1:15,0:15:22:83,0,22	0/1:31,12:43:87.09:651,0,87	0/1:11,10:22:25.92:197,0,26	1/1:7,5:12:6.02:92,6,0	0/1:12,16:30:67.86:77,0,68	1/1:6,9:16:9.03:133,9,0	0/1:17,7:24:29.12:236,0,29	1/1:3,4:7:9.50:139,10,0	1/1:12,3:14:12.04:181,12,0
chr10	91519134	.	T	TTG	899.54	PASS	AB=0.995;AC=19;AF=0.365;AN=52;BaseQRankSum=4.100;DP=457;FS=31.872;HRun=0;HaplotypeScore=104.0562;InbreedingCoeff=0.0623;MQ=54.74;MQ0=7;MQRankSum=-3.123;QD=3.43;ReadPosRankSum=2.119;VQSLOD=0.3420;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,7:16:3.01:51,3,0	0/1:4,0:4:0:0,0,0	./.	./.	0/1:19,0:19:22.20:30,0,22	0/0:28,0:26:34.96:0,35,377	0/0:20,0:20:37.14:0,37,431	0/1:19,0:19:32.50:137,0,33	0/1:8,0:7:9.40:30,0,9	0/0:22,0:22:34.57:0,35,343	0/0:13,0:13:19.13:0,19,211	0/1:14,0:13:28.19:76,0,28	0/0:8,0:8:13.35:0,13,118	1/1:8,0:8:5.85:38,6,0	1/1:8,6:13:5.71:87,6,0	0/0:12,0:12:22.02:0,22,218	1/1:12,14:26:4.12:52,4,0	0/1:33,0:34:0.52:1,0,381	0/1:16,0:15:29.78:59,0,30	0/0:8,0:8:4.49:0,4,15	0/1:43,0:44:96.70:225,0,97	0/0:18,0:18:25.76:0,26,215	0/0:11,0:10:11.32:0,11,117	0/0:34,0:34:33.87:0,34,364	0/0:15,0:14:15.66:0,16,117	0/1:20,0:20:32.07:136,0,32	0/1:8,0:8:9.05:69,0,9	0/1:12,0:12:62.14:62,0,62
chr10	91522836	.	T	TATAA	3213.87	PASS	AC=22;AF=0.423;AN=52;BaseQRankSum=-7.590;DP=389;FS=2.213;HRun=0;HaplotypeScore=54.7876;InbreedingCoeff=0.7464;MQ=54.11;MQ0=14;MQRankSum=-1.499;QD=22.47;ReadPosRankSum=-0.427;VQSLOD=2.8766;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,6:23:18.06:426,18,0	0/0:6,0:6:9.03:0,9,141	./.	0/0:12,0:3:2.98:0,3,22	0/0:17,0:16:30.10:0,30,470	1/1:4,15:20:42.14:995,42,0	1/1:5,1:7:3.01:71,3,0	0/0:40,0:33:24.01:0,24,285	0/0:5,0:5:3.01:0,3,47	1/1:15,0:14:3.01:69,3,0	1/1:11,1:12:3.01:71,3,0	0/0:11,0:11:15.04:0,15,213	1/1:6,2:8:6.02:142,6,0	0/0:8,0:8:9.03:0,9,141	0/0:15,0:15:21.07:0,21,329	1/1:6,4:9:12.04:284,12,0	0/0:39,0:38:75.21:0,75,1124	1/1:13,14:25:39.09:860,39,0	0/0:21,0:17:30.09:0,30,449	0/0:6,0:5:3.01:0,3,47	0/0:12,0:11:9.03:0,9,141	./.	1/1:6,3:9:12.04:275,12,0	1/1:5,0:5:3:25,3,0	1/1:4,3:7:9.03:182,9,0	0/0:12,0:12:18.04:0,18,241	0/0:13,0:13:15.05:0,15,231	0/0:14,0:14:24.08:0,24,374
chr10	91523056	.	CTTCT	C	14031.23	PASS	AB=0.539;AC=51;AF=0.981;AN=52;BaseQRankSum=-0.004;DP=592;FS=2.932;HRun=0;HaplotypeScore=118.1118;InbreedingCoeff=-0.0239;MQ=60.63;MQ0=4;MQRankSum=1.946;QD=24.36;ReadPosRankSum=0.955;VQSLOD=4.7041;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,30:39:54.18:877,54,0	1/1:1,9:10:11.68:178,12,0	./.	./.	1/1:20,0:20:42.12:643,42,0	1/1:3,13:16:27.09:441,27,0	1/1:5,12:18:7.27:101,7,0	1/1:21,0:18:17.97:205,18,0	1/1:24,0:24:51.06:755,51,0	1/1:6,15:21:45.13:667,45,0	1/1:2,13:15:39.13:611,39,0	1/1:25,0:25:69.19:1072,69,0	1/1:8,30:38:54.17:858,54,0	1/1:20,0:20:45.15:720,45,0	1/1:5,29:34:44.84:734,45,0	1/1:10,20:30:35.81:587,36,0	1/1:9,17:26:24.08:387,24,0	1/1:5,21:25:16.70:565,17,0	1/1:18,0:16:15.01:215,15,0	1/1:14,0:14:27.09:435,27,0	1/1:25,0:25:51.13:742,51,0	1/1:3,8:10:21.02:288,21,0	1/1:6,12:18:14.71:244,15,0	0/1:6,35:41:6.92:857,0,7	1/1:6,8:14:18.06:294,18,0	1/1:20,0:20:45.11:692,45,0	1/1:16,8:24:44.97:697,45,0	1/1:8,0:8:15:167,15,0
chr10	91523059	.	CTTT	C	5331.62	PASS	AB=0.941;AC=32;AF=0.571;AN=56;BaseQRankSum=11.360;DP=576;FS=6.870;HRun=3;HaplotypeScore=134.8919;InbreedingCoeff=-0.3923;MQ=60.38;MQ0=4;MQRankSum=-1.510;QD=9.50;ReadPosRankSum=11.375;VQSLOD=-0.1877;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:99:109,0,191	0/1:10,0:10:11.28:11,0,86	0/0:5,0:4:9:0,9,83	0/0:10,0:7:20.28:0,20,236	0/1:8,12:20:0.58:435,0,1	0/1:16,0:16:57.65:58,0,84	0/1:17,0:17:0.11:0,0,147	0/1:16,5:18:30.74:143,0,31	1/1:13,11:24:19.65:545,20,0	0/1:21,0:21:55.72:56,0,186	0/1:15,0:15:31.81:74,0,32	1/1:11,16:27:55.68:779,56,0	0/1:37,0:37:99:120,0,132	1/1:7,12:19:15.90:532,16,0	0/1:32,0:32:54.25:102,0,54	0/1:26,0:26:70.81:71,0,168	0/1:24,0:24:34.63:35,0,187	0/1:26,0:25:59.92:82,0,60	0/1:13,4:15:59.38:160,0,59	1/1:7,7:14:0.40:285,0,0	0/1:17,7:24:12.84:469,0,13	0/1:11,0:10:15.98:16,0,98	0/1:16,0:16:16.11:16,0,210	0/1:40,0:39:99:120,0,118	0/1:14,0:14:26.44:26,0,187	1/1:8,12:20:22.62:499,23,0	1/1:11,13:23:29.20:496,29,0	0/1:6,2:8:1.88:96,0,2
chr10	91523063	.	CT	C	1601.37	PASS	AB=0.741;AC=14;AF=0.259;AN=54;BaseQRankSum=10.354;DP=559;FS=6.721;HRun=3;HaplotypeScore=128.6745;InbreedingCoeff=-0.2041;MQ=60.07;MQ0=3;MQRankSum=0.566;QD=6.51;ReadPosRankSum=9.895;VQSLOD=-0.6065;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:12.19:0,12,193	0/0:10,0:10:11.10:0,11,115	./.	0/1:7,1:5:8.91:9,0,101	0/1:7,12:19:74.04:167,0,74	0/0:15,0:15:3.75:0,4,78	0/0:18,0:18:14.47:0,14,168	0/1:16,5:18:41.82:42,0,137	0/1:11,11:22:91:193,0,91	0/0:23,0:23:34.18:0,34,355	0/0:14,0:14:5.54:0,6,57	1/1:11,16:27:5.94:343,6,0	0/0:37,0:37:16.67:0,17,244	0/1:6,12:18:44.10:224,0,44	0/0:32,0:32:5.23:0,5,98	0/0:26,0:26:15:0,15,240	0/0:21,0:21:8.53:0,9,122	0/1:24,0:24:4.99:5,0,31	0/1:10,4:12:39.55:40,0,204	0/1:8,7:15:55.71:120,0,56	0/1:20,7:27:99:204,0,120	0/0:11,0:10:16.43:0,16,166	0/0:17,0:17:22.74:0,23,306	0/0:39,0:38:6.02:0,6,125	0/0:13,0:13:10.41:0,10,129	0/1:8,12:20:22.23:196,0,22	0/1:10,13:22:6.81:192,0,7	0/1:6,2:8:16.28:16,0,63
chr10	91524306	.	A	AGAGG	1260.71	PASS	AB=0.966;AC=9;AF=0.161;AN=56;BaseQRankSum=-3.043;DP=570;FS=1.627;HRun=0;HaplotypeScore=99.8304;InbreedingCoeff=0.8075;MQ=68.49;MQ0=11;MQRankSum=1.730;QD=10.25;ReadPosRankSum=1.216;VQSLOD=3.0806;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,17:31:21.03:469,21,0	1/1:3,0:3:6.02:121,6,0	0/0:32,0:14:3.27:0,3,83	0/1:54,0:21:4.54:5,0,196	0/0:22,0:22:56.90:0,57,846	0/0:14,0:14:24.07:0,24,354	0/0:26,0:26:48.16:0,48,789	0/0:32,0:32:60.15:0,60,950	0/0:21,0:21:39.08:0,39,547	0/0:17,0:17:41.96:0,42,625	0/0:8,0:8:20.94:0,21,313	0/0:22,0:22:38.93:0,39,536	0/0:17,0:17:36.10:0,36,583	0/0:22,0:22:48.15:0,48,770	1/1:1,13:14:18.06:449,18,0	0/0:29,0:28:60.13:0,60,854	1/1:5,14:19:15.05:369,15,0	0/0:21,0:21:19.89:0,20,577	0/0:16,0:14:15.05:0,15,253	0/0:17,0:16:39.11:0,39,600	0/0:20,0:20:45.07:0,45,661	0/0:6,0:6:12:0,12,149	0/0:13,0:13:24.05:0,24,350	0/0:31,0:31:57.62:0,58,888	0/0:20,0:20:50.98:0,51,777	0/0:16,0:16:33.07:0,33,505	0/0:19,0:19:38.48:0,38,575	0/0:6,0:6:18.06:0,18,290
chr10	91524535	.	AAAG	A	3513.71	PASS	AB=0.993;AC=43;AF=0.796;AN=54;BaseQRankSum=3.501;DP=568;FS=15.344;HRun=0;HaplotypeScore=93.7351;InbreedingCoeff=-0.0713;MQ=35.80;MQ0=36;MQRankSum=1.350;QD=6.73;ReadPosRankSum=4.161;VQSLOD=1.0991;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:25:30.45:257,30,0	1/1:4,0:4:4.94:22,5,0	0/1:49,0:6:3.80:4,0,40	0/0:39,0:5:5.45:0,5,26	0/1:20,0:18:21:92,0,21	0/1:15,0:15:6.58:59,0,7	0/1:15,1:14:10.99:129,0,11	0/1:41,0:37:15:247,0,15	1/1:9,0:9:17.62:127,18,0	0/1:25,0:23:58.23:144,0,58	0/1:16,0:15:14.30:103,0,14	1/1:13,1:13:13.71:74,14,0	0/1:15,0:13:44.85:59,0,45	1/1:12,0:11:8.49:110,8,0	1/1:20,0:19:40.25:234,40,0	1/1:21,0:18:8.74:121,9,0	1/1:25,1:23:15.56:161,16,0	1/1:23,0:19:16.54:76,17,0	1/1:24,0:18:3.93:106,4,0	1/1:23,1:24:5.36:156,5,0	0/1:13,0:12:11.11:72,0,11	1/1:8,0:8:3.77:90,4,0	1/1:13,0:12:8.98:90,9,0	1/1:17,1:14:8.05:69,8,0	1/1:30,0:27:36.72:471,37,0	1/1:20,1:21:51.27:292,51,0	1/1:18,1:19:14.24:150,14,0	./.
chr10	91524536	.	AAG	A	1184.44	PASS	AB=0.992;AC=33;AF=0.611;AN=54;BaseQRankSum=1.308;DP=572;FS=16.812;HRun=0;HaplotypeScore=96.4199;InbreedingCoeff=-0.3907;MQ=36.53;MQ0=35;MQRankSum=-2.592;QD=2.19;ReadPosRankSum=2.524;VQSLOD=0.7865;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,1:25:18.32:231,18,0	1/1:4,0:4:4.15:19,4,0	0/1:49,0:6:0.21:0,0,33	0/1:39,0:5:2.12:9,0,2	0/1:21,0:19:32.64:39,0,33	0/1:15,0:15:10.99:27,0,11	0/1:15,1:14:25.44:33,0,25	0/1:41,0:37:64.75:67,0,65	1/1:9,0:9:8.87:44,9,0	0/1:25,0:23:66.96:67,0,80	0/1:16,0:15:16.04:49,0,16	0/1:13,0:12:1.23:20,0,1	0/1:15,0:13:14.93:15,0,50	0/1:12,0:11:7.54:33,0,8	1/1:20,0:19:9.75:105,10,0	0/1:21,0:18:13.22:28,0,13	1/1:28,0:25:1.94:56,2,0	0/0:24,0:20:2.87:0,3,8	0/1:23,1:18:11:11,0,40	0/1:24,0:24:21.98:38,0,22	0/1:13,0:12:9.41:9,0,20	0/1:9,0:9:1.46:34,0,1	0/1:13,0:12:5.28:12,0,5	1/1:18,0:14:6.19:31,6,0	1/1:30,0:28:13.86:250,14,0	0/1:21,0:21:7.99:61,0,8	0/1:18,1:19:14.47:38,0,14	./.
chr10	91524538	.	GAAA	G	7104.93	PASS	AB=0.684;AC=49;AF=0.907;AN=54;BaseQRankSum=-5.812;DP=574;FS=5.549;HRun=15;HaplotypeScore=83.5767;InbreedingCoeff=0.6342;MQ=36.85;MQ0=37;MQRankSum=2.418;QD=14.86;ReadPosRankSum=1.880;VQSLOD=3.7018;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,8:26:24.59:328,25,0	1/1:6,0:6:8.97:75,9,0	0/0:50,0:6:8.28:0,8,72	0/0:39,0:5:12.41:0,12,105	1/1:5,16:19:20.95:231,21,0	1/1:5,10:15:9.02:150,9,0	1/1:10,6:14:28.07:291,28,0	1/1:8,33:37:71.77:784,72,0	1/1:3,6:9:18.05:199,18,0	1/1:11,14:23:26.42:264,26,0	1/1:8,5:15:13.12:177,13,0	1/1:2,11:12:15.04:165,15,0	0/1:7,6:11:36.88:146,0,37	1/1:3,8:10:23.81:247,24,0	1/1:17,3:19:35.27:345,35,0	1/1:8,13:18:12.98:226,13,0	1/1:10,17:25:33.07:318,33,0	1/1:7,17:20:18.03:192,18,0	1/1:10,14:19:31.74:357,32,0	1/1:8,16:24:26.69:375,27,0	1/1:6,6:11:20.15:209,20,0	1/1:3,7:10:14.84:166,15,0	1/1:4,10:12:16.83:198,17,0	1/1:7,11:14:8.18:96,8,0	1/1:21,9:28:48.23:589,48,0	1/1:3,19:22:63.14:679,63,0	1/1:5,13:18:26.94:300,27,0	./.
chr10	91525552	.	G	GA	3501.04	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-10.720;DP=638;FS=5.840;HRun=0;HaplotypeScore=62.4007;InbreedingCoeff=0.9984;MQ=64.33;MQ0=0;MQRankSum=2.222;QD=44.32;ReadPosRankSum=2.210;VQSLOD=4.1673;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:60.20:959,60,0	1/1:1,9:10:27.09:432,27,0	0/0:28,1:27:35.11:0,35,947	0/0:30,1:31:34.10:0,34,980	0/0:27,0:27:78.26:0,78,1086	0/0:24,0:24:69.23:0,69,964	0/0:38,0:38:99:0,102,1407	0/0:27,0:27:78.25:0,78,1076	0/0:18,0:18:54.18:0,54,755	0/0:28,0:28:81.27:0,81,1133	0/0:17,0:17:51.17:0,51,710	0/0:22,0:22:63.20:0,63,863	0/0:18,0:18:54.18:0,54,755	0/0:27,0:27:81.26:0,81,1114	1/1:0,25:25:69.24:1103,69,0	0/0:27,0:27:75.21:0,75,998	1/1:0,22:22:63.21:1007,63,0	0/0:27,0:27:78.26:0,78,1090	0/0:24,0:24:72.23:0,72,987	0/0:15,0:15:42.13:0,42,570	0/0:34,0:34:99:0,102,1422	0/0:12,0:12:36.12:0,36,503	0/0:17,0:17:51.17:0,51,713	0/0:22,0:22:63.19:0,63,861	0/0:19,0:19:51.17:0,51,713	0/0:23,0:23:68.82:0,69,933	0/0:25,0:25:75.25:0,75,1048	0/0:7,0:7:21.07:0,21,294
chr10	91526490	.	G	GA	5298.45	PASS	AB=0.859;AC=31;AF=0.554;AN=56;BaseQRankSum=-9.094;DP=596;FS=4.384;HRun=10;HaplotypeScore=75.6517;InbreedingCoeff=0.7630;MQ=56.39;MQ0=18;MQRankSum=-0.593;QD=13.38;ReadPosRankSum=-0.816;VQSLOD=4.8231;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,2:23:39.27:210,39,0	1/1:0,0:5:8.52:43,9,0	0/1:39,0:8:3.05:3,0,57	0/1:47,0:8:22.98:23,0,30	1/1:7,14:21:8.29:305,8,0	0/0:18,0:17:31.66:0,32,189	0/0:13,0:13:19.58:0,20,106	1/1:13,24:37:72.40:774,72,0	0/1:4,11:14:8:148,0,8	0/0:25,0:23:33.86:0,34,312	0/0:13,0:13:29.20:0,29,164	1/1:4,19:23:41.81:491,42,0	0/0:18,0:18:4.60:0,5,89	1/1:4,21:25:32.97:391,33,0	1/1:3,0:16:22.73:114,23,0	0/0:11,0:11:21.61:0,22,124	1/1:6,0:24:34.25:176,34,0	0/0:28,0:28:43.96:0,44,266	1/1:4,19:22:56.99:586,57,0	1/1:2,11:13:32.96:345,33,0	1/1:2,6:8:6.02:66,6,0	0/0:9,0:9:19.97:0,20,135	0/0:17,0:16:32.75:0,33,207	0/0:23,0:23:35.72:0,36,221	0/0:24,0:25:35.34:0,35,255	1/1:5,29:34:64.24:930,64,0	1/1:5,24:28:44.28:496,44,0	1/1:2,11:13:18.05:199,18,0
chr10	91527108	.	G	GA	2785.61	PASS	AB=0.745;AC=39;AF=0.696;AN=56;BaseQRankSum=-2.089;DP=472;FS=0.000;HRun=13;HaplotypeScore=62.7082;InbreedingCoeff=0.2945;MQ=58.61;MQ0=10;MQRankSum=1.072;QD=7.18;ReadPosRankSum=-1.688;VQSLOD=1.9171;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,2:32:25.63:26,0,240	0/0:5,0:4:5.94:0,6,41	0/0:13,0:4:4.98:0,5,26	0/0:12,0:9:6.87:0,7,34	1/1:7,12:20:4.15:193,4,0	0/1:9,1:23:9.13:125,0,9	1/1:17,2:24:32.83:189,33,0	1/1:9,17:26:10.04:336,10,0	0/1:3,7:10:5.57:95,0,6	0/1:7,0:6:14.59:19,0,15	0/1:7,2:12:19.95:35,0,20	1/1:11,4:15:19.21:156,19,0	1/1:2,2:11:11.53:71,12,0	1/1:10,6:17:26.99:257,27,0	0/0:18,0:18:30.49:0,30,204	1/1:6,1:20:2.84:116,3,0	0/0:33,0:35:38.81:0,39,392	1/1:9,3:23:14.27:182,14,0	0/1:14,7:21:17:137,0,17	1/1:2,9:10:17.94:151,18,0	1/1:4,8:12:15.49:140,15,0	1/1:3,0:5:1.56:19,2,0	1/1:2,0:9:8.24:43,8,0	1/1:8,0:13:26.04:130,26,0	1/1:2,0:16:11.36:57,11,0	0/1:9,10:19:2.03:117,0,2	1/1:14,7:23:12.78:253,13,0	1/1:0,8:8:12.01:111,12,0
chr10	91528262	.	T	TA	1839.63	PASS	AB=0.938;AC=9;AF=0.161;AN=56;BaseQRankSum=-2.558;DP=434;FS=0.528;HRun=9;HaplotypeScore=52.2767;InbreedingCoeff=0.8689;MQ=56.91;MQ0=38;MQRankSum=1.246;QD=18.21;ReadPosRankSum=2.890;VQSLOD=3.6721;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,35:35:58.17:869,58,0	1/1:2,6:6:14.91:166,15,0	0/0:3,0:3:9:0,9,78	0/0:3,0:3:6:0,6,52	0/0:23,0:21:56.03:0,56,475	0/0:22,0:22:53.98:0,54,469	0/0:5,0:5:14.91:0,15,119	0/0:36,0:33:92.76:0,93,792	0/0:10,0:10:29.90:0,30,248	0/0:15,0:12:29.98:0,30,260	0/0:14,0:14:38.99:0,39,339	0/0:18,0:18:35.92:0,36,305	0/0:8,0:8:14.95:0,15,124	0/0:8,0:6:18:0,18,156	1/1:2,10:12:27.07:299,27,0	0/0:16,0:16:41.99:0,42,365	1/1:8,21:23:60.16:663,60,0	0/0:19,0:15:35.99:0,36,312	0/0:25,0:18:53.99:0,54,469	0/0:17,0:15:35.96:0,36,309	0/0:10,0:7:17.99:0,18,156	0/0:10,0:6:18:0,18,156	0/0:10,0:9:23.99:0,24,208	0/0:9,0:8:23.95:0,24,201	0/0:13,0:13:29.06:0,29,257	0/1:14,1:15:0.21:0,0,223	0/0:21,0:17:50.97:0,51,438	0/0:17,0:17:24.79:0,25,321
chr10	91528463	.	T	TCA	1709.71	PASS	AB=0.879;AC=31;AF=0.620;AN=50;BaseQRankSum=-2.528;DP=591;FS=0.809;HRun=0;HaplotypeScore=89.7690;InbreedingCoeff=0.1835;MQ=72.04;MQ0=14;MQRankSum=-0.839;QD=4.50;ReadPosRankSum=-0.619;VQSLOD=2.5881;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:4.26:0,4,99	0/0:10,0:9:0.47:0,0,1	./.	./.	0/1:7,9:16:10.94:38,0,11	./.	1/1:14,9:23:9.03:132,9,0	1/1:15,0:15:2.92:17,3,0	1/1:9,11:20:9.03:132,9,0	1/1:14,0:14:12.19:136,12,0	0/1:13,6:18:35.05:35,0,35	0/1:26,1:27:53.80:173,0,54	0/0:20,0:20:22.61:0,23,137	1/1:13,0:13:9:86,9,0	0/1:32,0:31:65.12:65,0,85	0/1:24,7:33:60.60:93,0,61	0/0:26,0:26:2.93:0,3,182	1/1:10,6:13:15.05:220,15,0	1/1:13,1:14:6.01:71,6,0	0/1:17,0:17:1.95:83,0,2	0/1:24,0:24:26.92:37,0,27	0/0:9,0:9:8.98:0,9,73	1/1:6,7:13:2.60:44,3,0	1/1:21,9:31:9.03:132,9,0	0/0:11,0:9:5.74:0,6,31	1/1:19,0:19:15.02:166,15,0	1/1:16,10:27:6.49:84,6,0	1/1:7,0:6:12.38:121,12,0
chr10	91528509	.	ACT	A	5290.80	PASS	AB=0.995;AC=44;AF=0.786;AN=56;BaseQRankSum=-10.290;DP=604;FS=2.229;HRun=0;HaplotypeScore=88.4028;InbreedingCoeff=0.1194;MQ=70.26;MQ0=17;MQRankSum=-2.737;QD=9.85;ReadPosRankSum=3.692;VQSLOD=4.6423;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,28:34:3.01:42,3,0	1/1:7,0:7:14.90:111,15,0	0/0:32,0:19:51.79:0,52,485	0/0:35,0:23:52.24:0,52,548	0/1:20,0:19:2.68:117,0,3	1/1:22,0:22:32.89:261,33,0	1/1:26,0:25:31.46:276,31,0	1/1:28,0:26:62.91:561,63,0	1/1:28,0:28:29.92:261,30,0	1/1:15,0:15:1.62:171,2,0	0/1:10,0:9:17.07:40,0,17	0/1:28,0:28:38.08:248,0,38	1/1:6,16:22:15.04:192,15,0	1/1:18,0:18:15.92:227,16,0	0/1:24,1:25:99:212,0,133	0/1:31,0:30:35.09:231,0,35	1/1:6,29:35:29.64:363,30,0	1/1:15,0:14:18.33:184,18,0	1/1:13,0:13:24.78:235,25,0	0/1:15,0:15:59.14:59,0,62	1/1:30,0:29:47.52:369,48,0	1/1:8,0:8:11.98:99,12,0	1/1:11,0:11:11.06:97,11,0	1/1:33,0:33:44.45:357,44,0	1/1:12,1:11:20.94:192,21,0	0/1:16,0:16:15.91:144,0,16	1/1:25,0:24:23.16:190,23,0	0/1:9,0:8:32.62:52,0,33
chr10	91529231	.	CT	C	348.03	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=0.425;DP=435;FS=9.269;HRun=8;HaplotypeScore=49.2370;InbreedingCoeff=0.6733;MQ=44.85;MQ0=50;MQRankSum=-2.376;QD=4.00;ReadPosRankSum=1.879;VQSLOD=-0.4474;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,15:24:11.98:116,12,0	1/1:3,7:8:11.88:116,12,0	0/0:21,0:9:7.26:0,7,66	0/1:8,0:4:2.69:3,0,3	0/0:20,0:12:9.03:0,9,109	0/0:19,0:18:9.02:0,9,96	0/0:16,0:12:11.99:0,12,128	0/0:11,0:7:18.05:0,18,216	0/0:11,0:10:6.02:0,6,72	0/0:21,0:14:27.08:0,27,319	0/0:12,0:10:9.02:0,9,99	0/0:9,0:7:12.04:0,12,145	0/0:11,0:10:3.48:0,3,33	0/0:9,0:7:3.01:0,3,36	1/1:6,13:15:17.96:174,18,0	0/0:16,0:12:26.91:0,27,319	1/1:12,10:19:8.60:86,9,0	0/0:19,0:14:14.88:0,15,144	0/0:19,0:13:26.54:0,27,278	0/0:16,0:15:21.06:0,21,253	0/0:6,0:4:10.84:0,11,114	0/0:24,0:18:18.05:0,18,211	0/0:16,0:12:24.07:0,24,279	0/0:17,0:15:6.49:0,6,73	0/0:16,0:13:23.98:0,24,246	0/0:20,0:15:21.54:0,22,254	0/0:8,0:4:8.98:0,9,89	0/0:10,0:5:6.02:0,6,72
chr10	91530387	.	T	TA	4706.88	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-9.147;DP=497;FS=1.253;HRun=8;HaplotypeScore=52.0908;InbreedingCoeff=0.9761;MQ=78.05;MQ0=0;MQRankSum=0.048;QD=28.02;ReadPosRankSum=1.746;VQSLOD=5.3646;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:99:0,102,929	0/0:9,0:9:21.01:0,21,192	0/0:19,0:18:19.16:0,19,302	0/0:20,0:19:33.97:0,34,263	0/0:19,0:19:48.02:0,48,439	1/1:2,14:15:33.10:381,33,0	1/1:0,17:17:48.14:554,48,0	0/0:23,0:23:51:0,51,459	0/0:14,0:14:33.01:0,33,301	1/1:5,16:21:51.15:587,51,0	1/1:2,12:14:30.09:346,30,0	0/0:25,0:25:69.03:0,69,631	1/1:1,22:23:57.17:658,57,0	0/0:17,0:17:42.01:0,42,384	0/0:21,0:21:63.03:0,63,577	1/1:1,14:15:39.12:450,39,0	0/0:27,0:26:63.02:0,63,577	1/1:3,20:23:51.15:589,51,0	0/0:22,0:23:52.99:0,53,458	0/0:15,0:15:39.02:0,39,357	0/0:21,0:21:50.99:0,51,460	1/1:1,4:5:12.04:138,12,0	1/1:0,6:6:15.04:173,15,0	1/1:1,19:20:51.15:589,51,0	1/1:0,8:8:21.06:242,21,0	0/0:17,0:17:45.02:0,45,412	0/0:22,0:22:60.02:0,60,549	0/0:2,0:2:6:0,6,55
chr10	91530531	.	AAAAACAAAAAAAAAAAAC	A	2277.81	PASS	AB=0.954;AC=18;AF=0.321;AN=56;BaseQRankSum=0.032;DP=588;FS=32.523;HRun=0;HaplotypeScore=208.3747;InbreedingCoeff=-0.0242;MQ=36.96;MQ0=66;MQRankSum=2.225;QD=7.91;ReadPosRankSum=-3.716;VQSLOD=-0.0050;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:33:7.34:7,0,1129	0/0:5,0:5:9.42:0,9,86	0/0:57,0:3:9.03:0,9,217	0/0:63,0:9:19.39:0,19,187	0/1:7,16:23:15.49:226,0,15	0/0:22,0:16:10.30:0,10,1483	0/0:11,0:9:21.07:0,21,851	0/1:25,0:16:46.88:47,0,94	0/1:14,0:13:99:184,0,148	0/0:23,0:21:43.01:0,43,1841	0/0:24,0:21:45.02:0,45,1714	0/1:22,1:21:89.04:266,0,89	0/1:13,0:11:3.68:4,0,882	0/1:11,0:11:6.92:7,0,48	0/0:13,0:13:15.08:0,15,822	0/0:19,0:18:39.75:0,40,1663	0/1:26,0:22:50.49:50,0,991	0/0:19,0:15:39.59:0,40,1504	0/1:23,0:13:83.26:147,0,83	1/1:11,0:9:3.12:56,3,0	1/1:15,0:9:7.15:124,7,0	0/1:11,0:10:16.89:17,0,524	0/0:16,0:14:27.71:0,28,741	0/0:9,0:5:8.99:0,9,257	0/0:19,0:15:27.50:0,28,846	0/1:16,1:9:11.02:309,0,11	0/1:19,1:19:32.63:538,0,33	1/1:17,0:14:11.67:460,12,0
chr10	91530532	.	AAAACAAAAAAAAAAAAC	A	3456.92	PASS	AB=0.992;AC=24;AF=0.429;AN=56;BaseQRankSum=-4.107;DP=574;FS=14.042;HRun=0;HaplotypeScore=190.7957;InbreedingCoeff=0.2023;MQ=37.52;MQ0=66;MQRankSum=1.662;QD=11.45;ReadPosRankSum=-5.149;VQSLOD=-0.0386;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:33:45.44:45,0,854	0/0:5,0:5:10.72:0,11,82	0/0:57,0:3:9.02:0,9,178	0/0:64,0:10:23.76:0,24,194	1/1:21,0:21:29.11:320,29,0	0/0:21,0:16:24.47:0,24,1384	0/0:10,0:8:21.07:0,21,806	0/1:27,0:18:20.90:256,0,21	0/1:10,1:10:99:230,0,111	0/0:23,0:21:48.70:0,49,1714	0/0:24,0:21:47.99:0,48,1621	0/1:21,0:18:50.73:378,0,51	0/1:13,0:11:0.82:1,0,820	1/1:7,0:7:6.93:72,7,0	0/1:14,0:14:36.35:36,0,675	0/0:17,0:18:47.28:0,47,1558	0/1:26,0:22:54.17:54,0,816	0/0:19,0:15:39.09:0,39,1382	0/1:22,0:12:22.47:192,0,22	1/1:10,0:8:3.03:56,3,0	1/1:14,0:9:14.95:173,15,0	0/1:11,0:10:9.92:10,0,499	0/1:17,0:15:20.34:20,0,620	0/0:9,0:5:8.94:0,9,240	0/0:21,0:17:26.44:0,26,795	1/1:17,0:8:4.28:428,4,0	1/1:15,1:15:7.21:644,7,0	1/1:4,11:12:12.04:542,12,0
chr10	91531801	.	CA	C	2830.37	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-6.949;DP=761;FS=24.646;HRun=4;HaplotypeScore=138.9534;InbreedingCoeff=0.9984;MQ=60.12;MQ0=7;MQRankSum=-0.969;QD=21.28;ReadPosRankSum=3.657;VQSLOD=1.9783;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,47:53:99:1179,129,0	1/1:0,12:11:30.01:271,30,0	0/0:22,0:14:32.75:0,33,386	0/0:24,0:15:23.18:0,23,239	0/0:29,0:29:81.22:0,81,1081	0/0:16,0:15:42.14:0,42,568	0/0:25,0:25:34.35:0,34,523	0/0:31,0:31:66.61:0,67,873	0/0:24,0:24:54.17:0,54,726	0/0:22,0:22:57.16:0,57,709	0/0:27,0:26:49.94:0,50,602	0/0:44,0:45:99:0,102,1284	0/0:18,0:18:23.99:0,24,329	0/0:23,0:23:54.17:0,54,720	1/1:9,31:40:98.16:834,98,0	0/0:32,0:31:72.19:0,72,956	1/1:2,26:28:78.03:707,78,0	0/0:32,0:32:68.16:0,68,947	0/0:17,0:17:48.09:0,48,613	0/0:29,0:27:75.21:0,75,985	0/0:30,0:30:78.18:0,78,1015	0/0:22,0:22:45.10:0,45,568	0/0:23,0:23:42.16:0,42,530	0/0:37,0:36:69.47:0,69,916	0/0:19,0:19:45.15:0,45,610	0/0:27,0:27:78.24:0,78,1048	0/0:22,0:22:59.96:0,60,752	0/0:32,0:30:75.25:0,75,1021
chr10	91531806	.	C	CA	9079.04	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-14.300;DP=778;FS=20.217;HRun=9;HaplotypeScore=122.9877;InbreedingCoeff=0.9922;MQ=61.07;MQ0=7;MQRankSum=0.310;QD=15.06;ReadPosRankSum=-0.318;VQSLOD=3.4195;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:96.07:0,96,308	0/0:12,0:11:21.47:0,21,65	0/0:23,0:15:23.72:0,24,258	0/0:23,0:15:14.81:0,15,140	1/1:5,26:31:49.40:756,49,0	1/1:3,1:19:37.57:205,38,0	1/1:4,3:25:39.98:218,40,0	1/1:14,15:30:33.51:543,34,0	1/1:5,22:27:45.05:498,45,0	1/1:4,0:24:51.77:251,52,0	1/1:6,0:25:33.88:166,34,0	1/1:6,34:40:30.36:781,30,0	1/1:1,2:19:20.36:100,20,0	1/1:4,18:22:42.11:464,42,0	0/0:37,0:37:65.83:0,66,222	1/1:5,2:37:54.10:289,54,0	0/0:28,0:27:56.07:0,56,172	1/1:4,2:33:40.42:312,40,0	1/1:5,15:20:19.05:422,19,0	1/1:6,23:27:60.16:662,60,0	1/1:5,26:33:71.99:764,72,0	1/1:4,2:23:42.82:239,43,0	1/1:6,0:24:24.53:126,25,0	1/1:3,1:36:37.33:291,37,0	1/1:7,0:20:25.57:128,26,0	1/1:7,21:29:62.93:647,63,0	1/1:4,16:21:45.10:487,45,0	1/1:5,27:30:66.18:730,66,0
chr10	91532140	.	A	AAG	2830.57	PASS	AB=0.733;AC=28;AF=0.500;AN=56;BaseQRankSum=-2.481;DP=573;FS=1.927;HRun=0;HaplotypeScore=73.8407;InbreedingCoeff=0.6259;MQ=53.37;MQ0=19;MQRankSum=2.587;QD=8.28;ReadPosRankSum=3.178;VQSLOD=2.9290;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,1:27:3.99:143,4,0	1/1:3,0:10:18.21:89,18,0	0/0:37,0:5:11.69:0,12,100	0/1:36,0:4:2.49:2,0,18	1/1:7,22:31:13.20:481,13,0	0/0:16,0:16:28.67:0,29,234	0/0:3,0:3:6.01:0,6,58	1/1:9,16:27:31.35:303,31,0	1/1:5,9:14:5.38:74,5,0	0/0:22,0:22:37.99:0,38,399	0/0:23,0:22:38.33:0,38,292	0/1:5,14:19:16.06:81,0,16	0/0:10,0:10:23.88:0,24,185	1/1:3,7:11:5.78:102,6,0	1/1:3,0:26:24.63:120,25,0	0/0:27,0:26:47.08:0,47,543	1/1:3,0:33:25.33:144,25,0	0/0:28,0:28:50.17:0,50,376	0/1:7,7:16:8.33:215,0,8	1/1:5,15:25:33.08:386,33,0	1/1:2,5:7:2.79:41,3,0	0/0:4,0:3:2.99:0,3,23	0/0:16,0:16:32.81:0,33,253	0/0:17,0:17:18.74:0,19,126	0/0:27,0:26:41.80:0,42,337	1/1:11,3:26:23.96:442,24,0	1/1:25,1:27:24.28:377,24,0	0/1:3,2:4:26.89:34,0,27
chr10	91532340	.	AG	A	11463.62	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.612;DP=704;FS=10.184;HRun=1;HaplotypeScore=69.1936;InbreedingCoeff=0.9971;MQ=81.37;MQ0=0;MQRankSum=-2.855;QD=38.47;ReadPosRankSum=-0.044;VQSLOD=4.6910;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,2298	0/0:5,0:5:15.04:0,15,217	0/0:18,0:18:51:0,51,754	0/0:19,0:19:50.15:0,50,771	1/1:1,18:19:48.16:667,48,0	0/0:22,0:22:66.20:0,66,1029	0/0:29,0:29:87.28:0,87,1353	1/1:0,48:48:99:1900,141,0	1/1:0,29:29:69.23:965,69,0	0/0:23,0:23:63.21:0,63,1007	0/0:16,0:16:48.16:0,48,767	1/1:0,30:30:84.28:1172,84,0	0/0:25,0:25:75.24:0,75,1174	1/1:0,20:20:57.19:797,57,0	0/0:49,0:49:99:0,147,2299	0/0:34,0:34:99:0,102,1558	0/0:27,0:27:78.24:0,78,1215	0/0:26,0:26:78.27:0,78,1243	1/1:0,29:29:87.29:1215,87,0	1/1:1,17:18:54.11:731,54,0	1/1:0,26:26:66.22:923,66,0	0/0:7,0:7:21.07:0,21,331	0/0:11,0:11:33.11:0,33,527	0/0:28,0:28:84.29:0,84,1340	0/0:19,0:19:54.15:0,54,812	1/1:0,24:24:72.24:998,72,0	1/1:0,39:39:99:1508,108,0	1/1:0,16:16:42.14:587,42,0
chr10	91534404	.	AGTGCCCT	A	5796.78	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.397;DP=694;FS=0.448;HRun=0;HaplotypeScore=163.3615;InbreedingCoeff=0.9997;MQ=74.12;MQ0=0;MQRankSum=-13.927;QD=57.97;ReadPosRankSum=3.292;VQSLOD=4.5073;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,33:36:72.25:1836,72,0	1/1:0,11:11:27.09:712,27,0	0/0:21,0:21:51.12:0,51,1377	0/0:20,0:16:36.59:0,37,1238	0/0:18,0:18:48.16:0,48,1867	0/0:19,0:19:57.18:0,57,2145	0/0:20,0:20:54.17:0,54,2034	0/0:25,0:25:72.25:0,72,2624	0/0:20,0:20:57.20:0,57,2119	0/0:31,0:31:93.32:0,93,3701	0/0:23,0:23:69.22:0,69,2547	0/0:33,0:33:99:0,99,3988	0/0:31,0:31:93.32:0,93,3747	0/0:29,0:29:87.30:0,87,3419	1/1:1,30:31:72.25:1887,72,0	0/0:21,0:21:63.22:0,63,2545	1/1:3,19:22:54.14:1362,54,0	0/0:29,0:29:87.30:0,87,3358	0/0:27,0:27:81.27:0,81,3083	0/0:19,0:19:54.19:0,54,2127	0/0:36,0:36:99:0,108,4314	0/0:30,0:30:90.31:0,90,3563	0/0:25,0:25:69.24:0,69,2685	0/0:28,0:28:84.29:0,84,3287	0/0:22,0:22:63.21:0,63,2450	0/0:18,0:18:54.19:0,54,2107	0/0:34,0:33:99:0,102,4018	0/0:15,0:15:45.15:0,45,1770
chr10	91535079	.	A	AC	24163.24	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-9.292;DP=706;FS=0.587;HRun=2;HaplotypeScore=69.5643;InbreedingCoeff=0.9992;MQ=85.37;MQ0=0;MQRankSum=-10.821;QD=36.56;ReadPosRankSum=6.313;VQSLOD=4.8704;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,43:46:99:1661,117,0	1/1:0,16:16:45.15:644,45,0	0/0:15,0:15:42.13:0,42,521	0/0:29,0:30:84.15:0,84,952	1/1:1,23:24:57.19:820,57,0	1/1:0,13:13:36.12:518,36,0	1/1:4,34:38:87.29:1253,87,0	1/1:5,27:32:78.23:1100,78,0	1/1:0,17:17:42.14:605,42,0	1/1:1,20:21:60.20:863,60,0	1/1:0,11:11:30.10:430,30,0	1/1:1,28:29:72.24:1037,72,0	1/1:1,27:28:69.23:993,69,0	1/1:4,21:25:66.21:930,66,0	1/1:2,36:38:99:1426,99,0	1/1:1,27:28:75.25:1080,75,0	1/1:1,56:57:99:2117,147,0	1/1:0,19:19:45.15:648,45,0	1/1:0,23:23:66.22:950,66,0	1/1:0,18:18:48.16:690,48,0	1/1:2,41:43:99:1555,108,0	1/1:1,17:18:42.13:586,42,0	1/1:1,19:20:39.09:539,39,0	1/1:2,29:31:90.29:1278,90,0	1/1:0,13:13:33.11:473,33,0	1/1:0,19:19:54.12:717,54,0	1/1:0,22:22:57.19:820,57,0	1/1:1,11:12:30.10:430,30,0
chr10	91536346	.	CT	C	755.53	PASS	AB=0.849;AC=20;AF=0.357;AN=56;BaseQRankSum=-5.084;DP=480;FS=0.572;HRun=9;HaplotypeScore=71.8188;InbreedingCoeff=0.5623;MQ=66.46;MQ0=23;MQRankSum=1.084;QD=4.27;ReadPosRankSum=-0.124;VQSLOD=0.1267;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:47.99:0,48,633	0/0:4,0:4:9.03:0,9,123	0/0:54,0:10:6.37:0,6,191	0/0:31,0:8:14.88:0,15,92	0/1:5,9:13:11.74:58,0,12	0/0:20,0:19:27.05:0,27,321	0/0:17,0:17:23.27:0,23,252	1/1:9,22:31:11.82:204,12,0	1/1:2,6:8:4.16:16,4,0	0/0:14,0:14:32.32:0,32,409	0/0:9,0:9:20.55:0,21,230	1/1:16,1:17:8:61,8,0	0/1:9,0:9:0.69:1,0,65	1/1:10,0:10:12.18:70,12,0	0/0:14,0:14:26.95:0,27,344	0/0:16,0:16:27.91:0,28,299	0/0:32,0:32:66.17:0,66,836	0/0:24,0:22:17.48:0,17,158	1/1:14,2:16:12.34:88,12,0	1/1:3,7:10:12.26:104,12,0	0/1:7,0:7:13.37:25,0,13	0/0:4,0:4:6.96:0,7,79	0/0:11,0:11:1.11:0,1,167	0/0:12,0:12:4.68:0,5,63	0/0:13,0:13:32.12:0,32,360	1/1:13,7:20:10.19:108,10,0	1/1:2,11:13:2.15:22,2,0	0/1:16,6:22:7.61:182,0,8
chr10	91536352	.	T	TTC	4243.79	PASS	AB=0.653;AC=28;AF=0.500;AN=56;BaseQRankSum=-8.416;DP=490;FS=8.176;HRun=0;HaplotypeScore=74.6564;InbreedingCoeff=0.7597;MQ=64.68;MQ0=23;MQRankSum=-1.642;QD=18.45;ReadPosRankSum=5.034;VQSLOD=4.3363;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,4:28:45.14:646,45,0	1/1:4,0:4:9.03:118,9,0	0/0:59,0:10:8.72:0,9,162	0/0:32,0:8:16.57:0,17,125	0/0:14,0:13:35.91:0,36,304	1/1:15,2:16:14.96:202,15,0	0/1:9,7:16:12.57:151,0,13	0/0:31,0:31:79.78:0,80,694	0/0:9,0:9:9:0,9,78	1/1:2,10:12:27.06:369,27,0	1/1:1,8:9:20.63:152,21,0	0/0:17,0:17:23.98:0,24,203	1/1:6,6:13:11.60:140,12,0	0/0:10,0:10:23.95:0,24,203	1/1:13,1:14:27.09:363,27,0	1/1:14,3:17:25.19:356,25,0	1/1:28,2:30:54.17:713,54,0	0/1:9,15:23:6.12:182,0,6	0/0:17,0:17:40.70:0,41,330	0/0:9,0:9:23.92:0,24,196	0/0:5,0:5:12.01:0,12,125	1/1:3,1:4:0.57:65,1,0	1/1:5,7:12:14.91:173,15,0	1/1:3,9:12:2.49:106,2,0	1/1:15,1:16:38.90:506,39,0	0/0:22,0:22:53.03:0,53,475	0/0:12,0:12:5.83:0,6,50	0/0:23,0:23:52.18:0,52,428
chr10	91536353	.	T	TC	2748.84	PASS	AB=0.919;AC=24;AF=0.429;AN=56;BaseQRankSum=-5.669;DP=486;FS=2.854;HRun=0;HaplotypeScore=73.2383;InbreedingCoeff=0.5548;MQ=65.33;MQ0=23;MQRankSum=-0.252;QD=12.11;ReadPosRankSum=5.483;VQSLOD=4.2485;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,21:27:48.08:549,48,0	1/1:0,5:5:9.03:117,9,0	0/0:60,0:11:5.60:0,6,131	0/0:32,0:8:10.36:0,10,101	0/0:14,0:13:35.79:0,36,284	0/1:16,1:16:1.30:70,0,1	0/1:11,3:15:13.40:55,0,13	0/0:31,0:31:89.80:0,90,770	0/0:10,0:10:9.01:0,9,84	1/1:11,1:12:26.97:237,27,0	1/1:8,1:9:20.30:131,20,0	0/0:17,0:17:26.90:0,27,213	0/1:12,1:13:6.05:64,0,6	0/0:11,0:11:26.97:0,27,243	1/1:1,13:14:27.09:363,27,0	1/1:13,3:16:11.40:173,11,0	1/1:2,26:28:54.18:717,54,0	0/1:22,2:22:40.75:84,0,41	0/0:17,0:17:44.62:0,45,371	0/0:9,0:9:23.88:0,24,190	0/0:5,0:5:12:0,12,117	0/1:4,0:4:6.35:20,0,6	1/1:10,2:12:7.19:77,7,0	0/1:12,1:13:21.45:32,0,21	1/1:14,3:17:21.69:263,22,0	0/0:21,0:21:56.79:0,57,496	0/0:12,0:12:5.98:0,6,48	0/0:20,0:20:55.85:0,56,435
chr10	91536362	.	T	TTTG	3002.11	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-2.016;DP=438;FS=4.781;HRun=0;HaplotypeScore=77.8990;InbreedingCoeff=0.8507;MQ=66.10;MQ0=22;MQRankSum=-2.153;QD=14.57;ReadPosRankSum=1.955;VQSLOD=3.1721;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:27:5.89:224,0,6	1/1:5,0:5:8.31:43,8,0	0/0:56,0:10:1.89:0,2,80	0/0:31,0:9:10.84:0,11,75	0/0:10,0:9:17.49:0,17,112	1/1:4,16:22:15.04:251,15,0	1/1:7,0:11:21.03:324,21,0	0/0:25,0:25:39.37:0,39,331	0/0:9,0:9:11.92:0,12,100	1/1:7,0:7:15.01:145,15,0	1/1:3,0:4:8.95:105,9,0	0/0:16,0:16:17.03:0,17,118	1/1:11,0:12:21.02:215,21,0	0/0:10,0:10:23.87:0,24,213	1/1:13,0:13:23.76:99,24,0	1/1:4,7:15:22.31:350,22,0	1/1:24,0:24:39.04:213,39,0	1/1:17,0:17:20.03:250,20,0	0/0:13,0:13:28.06:0,28,228	0/0:10,0:10:16.89:0,17,189	0/0:10,0:10:23.65:0,24,186	1/1:3,1:5:9.16:104,9,0	1/1:10,1:13:24.37:278,24,0	1/1:9,0:10:15.48:178,15,0	1/1:15,0:17:46.97:442,47,0	0/0:19,0:19:35.49:0,35,297	0/0:10,0:10:5.70:0,6,51	0/0:12,0:12:28.10:0,28,253
chr10	91536948	.	A	AT	6999.76	PASS	AB=0.879;AC=31;AF=0.554;AN=56;BaseQRankSum=-14.467;DP=575;FS=1.215;HRun=11;HaplotypeScore=74.2767;InbreedingCoeff=0.7686;MQ=72.41;MQ0=2;MQRankSum=-0.571;QD=18.13;ReadPosRankSum=1.055;VQSLOD=5.8906;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,37:42:87.09:870,87,0	1/1:2,9:11:21:202,21,0	0/1:19,0:11:12:12,0,35	0/1:16,0:16:23.80:24,0,39	0/0:4,0:20:24.41:0,24,71	1/1:6,13:19:15.85:341,16,0	0/1:6,8:14:10.44:252,0,10	0/0:5,0:21:8.97:0,9,56	0/0:1,0:10:19.29:0,19,70	1/1:8,18:26:54.05:526,54,0	1/1:4,8:15:29.69:261,30,0	0/0:1,0:19:32.59:0,33,94	1/1:3,20:23:13.67:501,14,0	0/0:4,0:25:39.17:0,39,112	1/1:3,25:29:65.97:654,66,0	1/1:6,26:32:65.97:654,66,0	1/1:5,25:31:48.74:661,49,0	1/1:3,23:26:57.11:579,57,0	0/0:3,0:11:14.24:0,14,41	0/0:2,0:14:20.35:0,20,59	0/0:2,0:14:22.24:0,22,64	1/1:3,0:12:21.21:119,21,0	1/1:3,21:24:54.11:548,54,0	1/1:6,23:29:27.86:464,28,0	1/1:7,9:16:33.94:331,34,0	0/0:5,0:23:21.66:0,22,81	0/0:1,0:24:38.70:0,39,112	0/0:1,0:8:11.07:0,11,31
chr10	91542300	.	TC	T	10888.96	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.898;DP=588;FS=5.369;HRun=8;HaplotypeScore=139.0669;InbreedingCoeff=0.9683;MQ=71.57;MQ0=4;MQRankSum=-4.408;QD=21.18;ReadPosRankSum=4.656;VQSLOD=3.4579;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:25:41.69:398,42,0	1/1:0,7:7:18:165,18,0	0/0:38,0:22:41.71:0,42,378	0/0:35,0:20:11.58:0,12,280	1/1:4,6:10:20.97:189,21,0	1/1:3,20:23:60.10:581,60,0	1/1:3,17:20:51.04:478,51,0	1/1:5,14:18:39.01:367,39,0	1/1:2,11:13:33:295,33,0	1/1:1,19:20:57.09:547,57,0	1/1:3,9:12:21.03:201,21,0	1/1:7,19:26:66.07:623,66,0	1/1:2,24:26:69.11:668,69,0	1/1:5,20:25:60.04:561,60,0	1/1:6,20:26:55.78:504,56,0	1/1:1,20:21:48.04:455,48,0	1/1:3,24:25:44.99:425,45,0	1/1:1,23:24:63:588,63,0	1/1:4,17:19:45.04:422,45,0	1/1:3,7:10:20.97:188,21,0	1/1:4,17:20:29.91:290,30,0	1/1:4,10:13:27.04:262,27,0	1/1:3,15:18:39.01:369,39,0	1/1:3,20:23:47.88:454,48,0	1/1:1,12:13:29.91:273,30,0	1/1:8,21:29:68.99:656,69,0	1/1:5,23:28:81.02:745,81,0	1/1:6,6:12:20.98:183,21,0
chr10	91542310	.	TACAC	T	9530.08	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.287;DP=564;FS=3.771;HRun=0;HaplotypeScore=178.5263;InbreedingCoeff=0.9043;MQ=51.64;MQ0=7;MQRankSum=3.116;QD=19.37;ReadPosRankSum=4.444;VQSLOD=4.2239;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:23.23:188,23,0	1/1:7,0:7:14.22:78,14,0	0/0:35,0:15:12.05:0,12,339	0/0:37,0:13:20.66:0,21,361	1/1:7,2:9:9.03:149,9,0	1/1:22,1:23:49.79:450,50,0	1/1:18,1:19:43.37:289,43,0	1/1:13,4:16:18.05:269,18,0	1/1:6,6:13:30.09:460,30,0	1/1:23,0:23:53.11:431,53,0	1/1:12,0:12:11.57:67,12,0	1/1:10,12:22:54.18:868,54,0	1/1:28,0:28:66.15:532,66,0	1/1:12,11:23:51.16:794,51,0	1/1:23,1:24:51.98:366,52,0	1/1:22,0:22:46.17:277,46,0	1/1:27,0:25:39.77:288,40,0	1/1:28,0:28:38.13:273,38,0	1/1:10,6:14:21.07:334,21,0	1/1:6,3:9:20.90:307,21,0	1/1:21,1:20:14.89:191,15,0	1/1:12,0:11:23.36:192,23,0	1/1:16,0:16:29.36:260,29,0	1/1:21,0:21:23.28:177,23,0	1/1:13,1:14:30.86:212,31,0	1/1:13,14:28:57.44:1018,57,0	1/1:11,14:26:48.16:767,48,0	1/1:0,6:6:18.06:292,18,0
chr10	91542329	.	ACT	A	8153.90	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=-2.262;DP=585;FS=3.858;HRun=0;HaplotypeScore=170.7279;InbreedingCoeff=0.5409;MQ=50.45;MQ0=8;MQRankSum=0.830;QD=19.23;ReadPosRankSum=-0.267;VQSLOD=4.9992;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,6:25:38.93:408,39,0	1/1:0,5:5:12.04:179,12,0	0/0:46,0:17:27.10:0,27,358	0/0:40,0:16:36.85:0,37,393	0/0:9,0:8:12.47:0,12,105	1/1:14,6:20:53.78:548,54,0	1/1:8,11:19:48.39:620,48,0	0/0:28,0:27:44.56:0,45,533	0/0:15,0:15:17.79:0,18,132	1/1:12,9:21:56.68:637,57,0	1/1:0,7:7:12.04:178,12,0	0/1:23,0:23:90.40:90,0,119	1/1:16,15:31:87.17:1057,87,0	0/1:19,0:19:33:33,0,83	1/1:11,14:25:59.73:718,60,0	1/1:7,13:20:50.68:646,51,0	1/1:18,13:29:65.59:697,66,0	1/1:17,10:26:67.86:708,68,0	0/0:13,0:11:5.55:0,6,95	0/1:9,0:9:26.81:36,0,27	0/1:27,0:25:9.51:10,0,190	1/1:10,5:14:28.89:359,29,0	1/1:8,6:14:29.96:333,30,0	1/1:10,5:15:33:377,33,0	1/1:9,8:17:40.55:490,41,0	0/1:35,0:35:26.43:26,0,306	0/1:18,0:18:2.26:2,0,37	0/0:10,0:10:20.98:0,21,133
chr10	91542331	.	T	TCA	4958.79	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-1.678;DP=581;FS=5.303;HRun=0;HaplotypeScore=183.1624;InbreedingCoeff=0.9717;MQ=52.11;MQ0=8;MQRankSum=-1.047;QD=17.04;ReadPosRankSum=1.747;VQSLOD=4.8411;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,1:26:32.64:315,33,0	1/1:5,0:5:11.32:56,11,0	0/0:44,0:19:26.91:0,27,305	0/0:39,0:17:20.69:0,21,323	0/0:10,0:9:24.05:0,24,272	1/1:19,0:19:35.99:298,36,0	1/1:20,0:20:15.70:378,16,0	0/0:28,0:27:74.53:0,75,838	0/0:16,0:16:44.97:0,45,487	1/1:19,0:19:36.33:345,36,0	1/1:7,0:7:11.66:91,12,0	0/0:23,0:23:50.36:0,50,573	1/1:31,0:31:41.18:541,41,0	0/0:19,0:19:48.13:0,48,552	1/1:24,0:24:40.71:380,41,0	1/1:20,0:20:42.83:316,43,0	1/1:30,2:30:57.87:494,58,0	1/1:24,3:26:64.56:728,65,0	0/0:11,0:11:26.65:0,27,311	0/0:10,0:10:17.66:0,18,206	0/0:26,0:24:29.97:0,30,367	1/1:14,0:14:29.48:298,29,0	1/1:15,0:15:18.62:147,19,0	1/1:13,1:14:29.26:265,29,0	1/1:17,0:17:6.50:304,6,0	0/0:35,0:35:89.72:0,90,1020	0/0:19,0:19:47.73:0,48,537	0/0:10,0:10:30.09:0,30,358
chr10	91542370	.	AT	A	6770.26	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=2.548;DP=543;FS=0.000;HRun=9;HaplotypeScore=116.8791;InbreedingCoeff=0.9715;MQ=69.49;MQ0=0;MQRankSum=-1.973;QD=22.87;ReadPosRankSum=0.422;VQSLOD=3.9568;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:66.03:604,66,0	1/1:1,2:3:6:55,6,0	0/0:26,0:24:11.91:0,12,345	0/0:16,0:15:29.44:0,29,306	1/1:1,11:12:33.01:302,33,0	0/0:18,0:18:45.09:0,45,497	0/0:18,0:18:45.13:0,45,519	1/1:4,23:27:68.98:614,69,0	1/1:1,21:22:63.03:577,63,0	0/0:16,0:16:45.12:0,45,507	0/0:11,0:11:18.05:0,18,207	1/1:3,21:24:60:549,60,0	0/0:24,0:24:63.14:0,63,711	1/1:4,16:21:47.06:418,47,0	1/1:5,25:30:72.03:659,72,0	0/0:17,0:17:51.15:0,51,587	1/1:2,28:29:78.04:713,78,0	0/0:24,0:24:63.19:0,63,725	1/1:5,10:15:33.01:300,33,0	1/1:5,4:9:8.99:82,9,0	1/1:1,19:20:57.03:521,57,0	0/0:21,0:21:54.16:0,54,623	0/0:11,0:11:30.09:0,30,341	0/0:30,0:30:90.23:0,90,1022	0/0:15,0:15:39.11:0,39,441	1/1:4,33:37:99:905,99,0	1/1:2,9:12:28.82:252,29,0	1/1:0,8:8:24.01:219,24,0
chr10	91543179	.	G	GGCGCGGGTGGCT	574.77	PASS	AC=14;AF=0.412;AN=34;BaseQRankSum=3.730;DP=145;FS=12.897;HRun=0;HaplotypeScore=66.4972;InbreedingCoeff=0.6433;MQ=60.56;MQ0=1;MQRankSum=-2.064;QD=13.06;ReadPosRankSum=-3.828;VQSLOD=-0.6352;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:18:0,18,388	./.	./.	0/0:4,0:3:2.84:0,3,15	./.	./.	0/0:21,0:21:39.07:0,39,983	1/1:2,0:2:6.01:132,6,0	1/1:2,0:2:3.01:98,3,0	0/0:4,0:4:12.04:0,12,307	0/0:1,0:1:3.01:0,3,106	./.	1/1:3,0:3:0.47:1,0,0	1/1:3,2:6:3.01:119,3,0	0/0:2,0:2:6.02:0,6,213	0/0:5,0:5:6.02:0,6,213	0/0:12,0:12:30.06:0,30,930	0/0:17,0:17:36.04:0,36,1104	1/1:9,0:9:11.96:95,12,0	./.	1/1:19,0:18:3.01:36,3,0	./.	./.	0/0:16,0:16:33.11:0,33,1167	./.	1/1:0,1:3:8.97:221,9,0	./.	./.
chr10	91544694	.	TG	T	10233.35	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=11.486;DP=567;FS=0.643;HRun=2;HaplotypeScore=98.3227;InbreedingCoeff=0.9964;MQ=77.57;MQ0=0;MQRankSum=-2.064;QD=35.41;ReadPosRankSum=3.861;VQSLOD=5.0277;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:90.29:1168,90,0	1/1:0,6:6:18.06:234,18,0	0/0:11,0:11:29.31:0,29,398	0/0:13,1:14:36.12:0,36,540	0/0:18,0:18:54.18:0,54,808	1/1:0,22:22:60.20:779,60,0	1/1:0,25:25:69.22:896,69,0	0/0:21,0:21:63.20:0,63,908	0/0:25,1:26:36.29:0,36,1040	1/1:1,22:23:66.21:857,66,0	1/1:0,10:10:27.09:350,27,0	0/0:37,0:37:99:0,108,1597	1/1:1,27:28:75.24:973,75,0	0/0:27,0:27:78.26:0,78,1167	1/1:1,14:15:42.14:545,42,0	1/1:1,23:24:24.25:812,24,0	1/1:0,35:35:99:1285,99,0	1/1:1,21:22:57.18:737,57,0	0/0:14,0:14:39.13:0,39,585	0/0:9,0:9:27.09:0,27,403	0/0:43,0:43:99:0,126,1885	1/1:1,8:9:21.07:272,21,0	1/1:0,7:7:18.06:233,18,0	1/1:2,20:22:57.19:740,57,0	1/1:0,9:9:27.09:351,27,0	0/0:23,0:23:66.22:0,66,989	0/0:20,0:19:60.20:0,60,898	0/0:15,0:15:45.15:0,45,674
chr10	91544849	.	GA	G	14072.78	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=14.042;DP=794;FS=3.327;HRun=3;HaplotypeScore=78.3804;InbreedingCoeff=0.9996;MQ=86.96;MQ0=0;MQRankSum=-2.698;QD=34.49;ReadPosRankSum=3.470;VQSLOD=5.5565;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,54:54:99:1933,156,0	1/1:0,10:10:30.09:370,30,0	0/0:21,0:21:57.17:0,57,796	0/0:31,0:31:73.84:0,74,1098	0/0:17,0:17:51.17:0,51,733	1/1:0,22:22:60.19:744,60,0	1/1:0,34:34:90.28:1116,90,0	0/0:33,0:33:95.97:0,96,1304	0/0:27,1:28:47.08:0,47,1128	1/1:2,21:23:63.18:768,63,0	1/1:1,8:9:24.07:298,24,0	0/0:54,0:54:99:0,160,2271	1/1:0,30:30:87.27:1074,87,0	0/0:43,0:43:99:0,123,1752	1/1:0,29:29:78.25:966,78,0	1/1:0,32:32:96.30:1190,96,0	1/1:1,41:42:99:1413,114,0	1/1:1,38:39:99:1376,111,0	0/0:18,0:18:51.17:0,51,734	0/0:17,0:17:51.16:0,51,718	0/0:59,0:59:99:0,172,2418	1/1:1,14:15:36.11:446,36,0	1/1:1,13:14:39.12:483,39,0	1/1:1,41:42:99:1450,117,0	1/1:0,13:13:36.11:446,36,0	0/0:25,0:25:75.25:0,75,1080	0/0:26,0:25:66.19:0,66,911	0/0:14,0:14:42.14:0,42,605
chr10	91546281	.	C	CG	7096.82	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-5.752;DP=600;FS=9.574;HRun=0;HaplotypeScore=121.9669;InbreedingCoeff=0.9807;MQ=62.21;MQ0=3;MQRankSum=1.807;QD=32.26;ReadPosRankSum=1.679;VQSLOD=3.6240;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:75.15:0,75,975	0/0:8,0:8:18.04:0,18,217	0/0:25,0:14:41.58:0,42,497	0/0:30,0:20:28.95:0,29,496	1/1:3,17:20:20.50:317,21,0	0/0:18,0:17:27.06:0,27,340	0/0:14,0:14:30.05:0,30,382	1/1:4,25:29:74.94:1051,75,0	1/1:0,15:15:39.13:591,39,0	0/0:31,0:31:84.26:0,84,1130	0/0:28,0:28:69.15:0,69,856	1/1:1,26:27:53.76:744,54,0	0/0:19,0:19:42.14:0,42,568	1/1:0,16:16:27.09:406,27,0	0/0:25,0:26:45.15:0,45,624	0/0:22,1:23:5.51:0,6,575	0/0:24,0:24:57.12:0,57,727	0/0:18,0:18:45.08:0,45,563	1/1:1,14:15:39.01:501,39,0	1/1:1,22:22:59.72:763,60,0	1/1:1,22:23:51:720,51,0	0/0:22,0:22:41.94:0,42,562	0/0:13,0:13:30.09:0,30,393	0/0:30,0:30:71.98:0,72,918	0/0:18,0:18:39.10:0,39,494	1/1:2,21:23:24.17:837,24,0	1/1:1,19:20:54.18:815,54,0	1/1:2,7:9:24.08:351,24,0
chr10	91546992	.	CGTGTGTGTGTGT	C	2540.31	PASS	AB=0.864;AC=26;AF=0.520;AN=50;BaseQRankSum=5.964;DP=615;FS=0.692;HRun=0;HaplotypeScore=191.8621;InbreedingCoeff=0.0650;MQ=62.60;MQ0=19;MQRankSum=-4.937;QD=7.10;ReadPosRankSum=0.822;VQSLOD=2.3790;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:33.11:0,33,654	0/0:6,0:7:15.05:0,15,339	./.	./.	1/1:11,2:13:0.89:2,1,0	1/1:13,0:13:2.69:16,3,0	0/1:16,0:15:7.73:8,0,37	0/0:29,0:29:1.25:0,1,4	1/1:9,7:15:6.02:205,6,0	0/0:12,0:12:4.83:0,5,43	0/1:9,2:11:0.35:142,0,0	0/1:19,5:25:10.96:398,0,11	0/1:9,0:13:40.09:83,0,40	1/1:14,1:17:12.01:290,12,0	0/0:26,0:32:33.42:0,33,780	0/1:20,0:24:86.19:86,0,337	0/0:30,0:33:7.95:0,8,804	0/1:16,0:23:99:168,0,191	0/0:15,0:15:0.89:0,1,2	1/1:12,5:17:3.01:55,3,0	0/1:37,0:36:30.25:30,0,115	1/1:5,1:10:9.03:142,9,0	./.	0/1:28,0:29:79.67:88,0,80	0/1:9,0:15:6.48:110,0,6	0/1:34,2:31:17.93:152,0,18	1/1:24,2:27:20.72:384,21,0	1/1:9,6:15:12.04:337,12,0
chr10	91547453	.	GAA	G	4025.94	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-8.403;DP=434;FS=19.257;HRun=9;HaplotypeScore=102.2960;InbreedingCoeff=0.8991;MQ=48.52;MQ0=12;MQRankSum=0.707;QD=19.93;ReadPosRankSum=3.396;VQSLOD=1.0269;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,25:34:63.14:722,63,0	1/1:2,4:6:9.02:105,9,0	0/0:5,0:1:3.01:0,3,35	0/0:16,0:7:2.54:0,3,32	0/0:5,1:24:7.27:0,7,141	0/0:4,0:12:28.87:0,29,146	0/0:11,0:21:42.56:0,43,228	0/0:7,0:19:40.93:0,41,182	0/0:6,0:9:19.73:0,20,115	1/1:7,10:15:29.82:349,30,0	1/1:3,12:15:26.97:313,27,0	0/0:9,0:15:22.96:0,23,108	1/1:7,5:12:17.98:203,18,0	0/0:8,0:12:22.36:0,22,103	1/1:8,9:17:33.07:373,33,0	1/1:9,5:14:20.93:222,21,0	1/1:7,12:18:33.08:383,33,0	0/0:7,0:16:24.80:0,25,127	0/0:3,0:8:12.88:0,13,52	0/0:2,0:11:15.95:0,16,73	0/0:9,0:17:19.62:0,20,71	1/1:6,11:16:36.04:408,36,0	1/1:4,9:12:23.94:251,24,0	1/1:4,10:13:18.05:210,18,0	1/1:6,16:22:42.02:489,42,0	0/0:8,1:17:4.21:0,4,150	0/0:7,0:15:31.39:0,31,139	0/0:8,0:9:24.52:0,25,136
chr10	91547461	.	AAG	A	1610.75	PASS	AB=0.974;AC=17;AF=0.304;AN=56;BaseQRankSum=-3.763;DP=475;FS=25.480;HRun=0;HaplotypeScore=127.9490;InbreedingCoeff=0.0448;MQ=48.26;MQ0=14;MQRankSum=3.728;QD=6.60;ReadPosRankSum=2.242;VQSLOD=1.5449;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:40:21.23:280,0,21	0/1:6,0:6:0.55:72,0,1	0/1:7,0:3:17.72:18,0,38	0/0:17,0:8:2.48:0,2,22	0/0:25,0:25:45.85:0,46,277	0/0:14,0:14:22.99:0,23,169	0/0:23,0:23:36.02:0,36,219	0/0:23,0:22:41.43:0,41,304	0/0:8,0:8:17.77:0,18,96	0/1:19,0:18:72.25:110,0,72	0/1:16,1:17:21.61:160,0,22	0/1:16,0:15:19.67:20,0,46	0/1:13,1:13:35.92:101,0,36	0/0:12,0:11:18.77:0,19,90	0/1:19,2:21:39.52:155,0,40	0/1:11,1:12:11.20:93,0,11	1/1:20,2:21:14.82:202,15,0	0/0:19,0:19:3.76:0,4,112	0/0:9,0:9:4.22:0,4,64	0/0:10,0:10:16.89:0,17,119	0/0:14,0:14:11.25:0,11,71	1/1:15,0:14:34.55:210,35,0	0/1:12,0:11:26.93:68,0,27	0/1:22,0:20:16.39:100,0,16	1/1:18,0:18:12.49:191,12,0	0/0:21,0:20:0.99:0,1,147	0/0:20,0:19:28.07:0,28,163	0/0:16,0:10:23.22:0,23,102
chr10	91549623	.	TG	T	2271.39	PASS	AB=0.941;AC=29;AF=0.518;AN=56;BaseQRankSum=5.234;DP=316;FS=4.769;HRun=9;HaplotypeScore=44.3017;InbreedingCoeff=0.8268;MQ=79.01;MQ0=2;MQRankSum=-2.097;QD=11.47;ReadPosRankSum=3.565;VQSLOD=2.2071;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:21:40.74:120,41,0	0/0:2,0:2:1.82:0,2,5	0/0:17,0:16:14.30:0,14,274	0/1:14,1:16:22.79:23,0,182	1/1:2,5:7:15.01:137,15,0	0/0:2,0:4:5.68:0,6,29	0/0:6,0:7:10.14:0,10,66	1/1:9,14:23:38.03:335,38,0	1/1:2,6:8:21:189,21,0	0/0:13,0:13:27.05:0,27,290	0/0:2,0:3:8.86:0,9,84	1/1:1,11:12:33.01:302,33,0	0/0:10,0:10:24.04:0,24,262	1/1:2,11:13:30.01:274,30,0	1/1:3,0:12:14.26:42,14,0	0/0:12,0:12:36.11:0,36,415	1/1:4,0:33:46.85:138,47,0	0/0:1,0:11:11.36:0,11,58	1/1:5,4:9:12:110,12,0	1/1:2,3:5:9:82,9,0	1/1:3,11:14:27.01:247,27,0	0/0:7,0:7:12.04:0,12,139	0/0:8,0:8:12.04:0,12,139	0/0:18,1:19:20.68:0,21,492	0/0:5,0:5:12.04:0,12,138	1/1:2,8:10:24:215,24,0	1/1:3,7:10:21.01:192,21,0	1/1:0,3:3:9:82,9,0
chr10	91549718	.	C	CAAGAAAGA	10429.88	PASS	AB=0.854;AC=22;AF=0.393;AN=56;BaseQRankSum=-2.761;DP=491;FS=0.439;HRun=0;HaplotypeScore=114.2406;InbreedingCoeff=0.8427;MQ=74.04;MQ0=0;MQRankSum=-11.582;QD=49.67;ReadPosRankSum=-5.027;VQSLOD=3.7126;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:51.17:0,51,1285	0/0:4,0:4:12.04:0,12,298	0/1:25,0:21:9.28:9,0,263	0/0:19,0:18:12.04:0,12,301	1/1:13,3:17:24.08:678,24,0	0/0:10,0:10:27.09:0,27,695	0/0:14,0:14:18.03:0,18,358	1/1:28,0:28:66.06:1642,66,0	1/1:6,8:14:30.10:1114,30,0	0/0:30,0:30:60.20:0,60,1495	0/0:7,0:7:15.04:0,15,336	1/1:12,4:16:24.08:856,24,0	0/0:23,0:23:40.91:0,41,1407	1/1:4,11:18:30.10:1183,30,0	0/0:23,0:23:57.18:0,57,1388	0/0:15,0:15:27.09:0,27,696	0/0:25,0:25:60.18:0,60,1410	0/0:14,0:14:30.10:0,30,761	1/1:7,9:16:29.99:822,30,0	1/1:7,4:12:18.06:717,18,0	1/1:12,2:14:23.88:479,24,0	0/0:18,0:18:45.15:0,45,1147	0/0:12,0:12:33.10:0,33,791	0/0:25,0:25:57.18:0,57,1395	0/0:15,0:15:42.12:0,42,980	0/1:10,6:17:47.13:934,0,47	1/1:9,10:20:21.07:805,21,0	1/1:1,11:13:30.10:1191,30,0
chr10	91551193	.	GGTGTGTGT	G	474.19	PASS	AB=0.875;AC=14;AF=0.292;AN=48;BaseQRankSum=2.689;DP=594;FS=13.133;HRun=0;HaplotypeScore=136.8096;InbreedingCoeff=0.5053;MQ=69.54;MQ0=11;MQRankSum=-2.284;QD=2.91;ReadPosRankSum=-0.041;VQSLOD=1.8319;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:33.11:0,33,1054	0/0:6,0:6:3.01:0,3,76	./.	./.	./.	0/0:13,0:14:15.01:0,15,284	0/0:29,0:32:18.04:0,18,385	0/0:13,0:13:0.89:0,1,2	1/1:13,2:16:5.91:90,6,0	0/0:22,0:24:27.09:0,27,787	0/0:8,0:8:5.78:0,6,205	1/1:10,5:15:4.88:92,5,0	0/0:18,0:17:18.04:0,18,496	1/1:19,0:20:2.80:13,3,0	0/0:19,0:26:17.98:0,18,632	0/0:26,0:27:11.82:0,12,414	0/0:14,0:24:24.06:0,24,750	0/0:25,0:30:27.09:0,27,829	1/1:15,2:16:5.68:86,6,0	1/1:4,2:6:2.97:21,3,0	0/1:43,0:43:23.57:26,0,24	0/0:13,0:13:9.01:0,9,193	0/0:12,0:12:2.70:0,3,99	0/0:33,0:51:21.58:0,22,594	0/0:9,0:10:9.03:0,9,289	1/1:23,5:27:9.02:153,9,0	0/1:12,6:18:32.53:140,0,33	./.
chr10	91554974	.	CT	C	1944.76	PASS	AB=0.717;AC=42;AF=0.750;AN=56;BaseQRankSum=-5.590;DP=211;FS=1.855;HRun=2;HaplotypeScore=54.2332;InbreedingCoeff=0.1113;MQ=63.28;MQ0=3;MQRankSum=-0.146;QD=10.02;ReadPosRankSum=-3.167;VQSLOD=0.4130;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,2:14:10.25:102,10,0	0/1:2,0:2:0:0,0,0	1/1:13,0:6:5.35:46,5,0	0/1:19,0:9:8.89:9,0,79	1/1:0,2:2:3.01:34,3,0	1/1:2,4:6:12.04:153,12,0	1/1:1,1:17:8.35:60,8,0	1/1:1,8:9:24.08:308,24,0	0/1:1,1:2:1.28:29,0,1	0/1:3,1:8:49.41:49,0,68	1/1:5,0:6:0.65:34,1,0	1/1:0,6:6:15.05:186,15,0	0/1:2,0:3:1.09:1,0,22	1/1:0,3:3:6.02:76,6,0	1/1:3,4:7:14.53:160,15,0	0/0:1,1:5:3.07:0,3,23	1/1:4,2:6:5.99:60,6,0	0/1:4,4:8:12.45:91,0,12	1/1:4,5:9:4.30:171,4,0	1/1:3,0:4:6.01:64,6,0	1/1:4,15:18:9.91:105,10,0	0/1:0,2:6:10.44:50,0,10	0/0:1,0:2:2.60:0,3,10	0/0:2,1:10:13.01:0,13,60	0/1:2,3:9:30.41:64,0,30	1/1:6,1:9:1.22:160,1,0	1/1:0,2:2:2.75:38,3,0	1/1:0,3:3:3.01:37,3,0
chr10	91555144	.	CT	C	6173.64	PASS	AB=0.833;AC=39;AF=0.696;AN=56;BaseQRankSum=11.119;DP=469;FS=12.473;HRun=10;HaplotypeScore=54.6045;InbreedingCoeff=0.8727;MQ=71.59;MQ0=0;MQRankSum=-0.205;QD=20.38;ReadPosRankSum=1.332;VQSLOD=5.0339;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:79.07:0,79,847	0/1:4,1:5:14.02:14,0,88	0/0:10,0:10:23.42:0,23,208	0/0:7,1:8:2.75:0,3,154	1/1:2,13:15:35.99:313,36,0	0/0:19,0:19:51.14:0,51,564	0/0:22,0:22:60.16:0,60,664	1/1:1,18:19:53.97:466,54,0	1/1:2,20:22:35.61:470,36,0	1/1:2,15:17:44.99:391,45,0	1/1:2,9:11:26.13:233,26,0	1/1:3,14:17:38.99:339,39,0	1/1:1,19:20:53.98:468,54,0	1/1:0,15:15:41.99:365,42,0	0/0:18,1:19:31.04:0,31,533	1/1:3,14:17:38.99:338,39,0	0/0:27,0:26:72.17:0,72,785	0/0:28,2:30:52.17:0,52,804	1/1:1,14:15:41.99:364,42,0	1/1:5,5:10:14.99:130,15,0	1/1:1,14:16:35.03:292,35,0	1/1:2,21:23:26.80:462,27,0	1/1:2,10:12:26.99:234,27,0	1/1:3,16:19:8.80:305,9,0	1/1:2,7:9:17.99:156,18,0	1/1:2,18:20:53.98:469,54,0	1/1:5,8:13:20.99:182,21,0	1/1:1,7:8:21:182,21,0
chr10	91556402	.	G	GC	12622.06	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=9.173;DP=654;FS=5.088;HRun=8;HaplotypeScore=123.6901;InbreedingCoeff=0.9626;MQ=85.73;MQ0=1;MQRankSum=-4.092;QD=23.25;ReadPosRankSum=2.756;VQSLOD=3.9782;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:33:54.07:276,54,0	1/1:3,0:9:11.40:58,11,0	0/0:27,0:27:56.14:0,56,475	0/0:18,0:18:24.58:0,25,233	1/1:4,11:15:39.07:429,39,0	0/0:24,0:24:69.01:0,69,625	0/0:29,0:29:80.99:0,81,726	1/1:6,15:21:17.67:457,18,0	1/1:1,32:33:90.23:1024,90,0	1/1:2,10:12:33.09:369,33,0	1/1:0,11:11:24.07:276,24,0	1/1:2,26:28:72.21:831,72,0	1/1:4,21:25:54.16:617,54,0	1/1:4,15:19:42.12:481,42,0	1/1:2,1:29:57.45:309,57,0	1/1:5,40:45:99:1313,114,0	1/1:4,4:34:70.88:432,71,0	0/0:13,0:13:35.99:0,36,322	1/1:7,18:26:62.97:674,63,0	1/1:6,20:26:29.67:580,30,0	1/1:6,32:38:44.34:1005,44,0	1/1:2,19:21:45.13:519,45,0	1/1:4,15:19:17.64:443,18,0	1/1:7,26:33:41.73:734,42,0	1/1:4,10:14:24.07:277,24,0	1/1:3,22:26:44.73:756,45,0	1/1:0,22:20:60.18:691,60,0	1/1:0,3:3:6.02:69,6,0
chr10	91560178	.	T	TC	6991.65	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-11.425;DP=657;FS=10.927;HRun=8;HaplotypeScore=63.9532;InbreedingCoeff=0.9998;MQ=87.53;MQ0=0;MQRankSum=-2.354;QD=27.42;ReadPosRankSum=-0.231;VQSLOD=4.8114;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,111,1015	0/0:13,0:13:36.01:0,36,326	0/0:20,0:20:44.81:0,45,382	0/0:26,0:26:59.94:0,60,528	1/1:1,21:22:57.17:657,57,0	0/0:19,0:19:51.03:0,51,466	0/0:51,0:51:99:0,129,1180	1/1:4,17:21:51.11:561,51,0	1/1:0,14:14:36.11:415,36,0	0/0:19,0:19:48.03:0,48,439	0/0:15,0:15:41.99:0,42,384	1/1:3,22:25:56.75:657,57,0	0/0:14,0:14:42.02:0,42,384	1/1:3,23:27:63.17:712,63,0	0/0:27,0:28:77.07:0,77,692	0/0:17,0:17:42.01:0,42,384	0/0:35,0:35:89.99:0,90,815	0/0:23,0:23:57.02:0,57,522	1/1:5,15:20:45.13:519,45,0	1/1:2,13:15:39.12:449,39,0	1/1:10,45:55:99:1523,132,0	0/0:11,0:11:33.02:0,33,302	0/0:17,0:17:39.02:0,39,357	0/0:32,0:32:87.02:0,87,790	0/0:18,0:18:48.03:0,48,439	1/1:5,21:26:33.18:631,33,0	1/1:1,16:17:45.13:519,45,0	1/1:2,11:13:30.09:346,30,0
chr10	91560571	.	GAGAGAGAGAGAGAA	G	4037.96	PASS	AB=1.000;AC=39;AF=0.722;AN=54;BaseQRankSum=-9.893;DP=482;FS=5.323;HRun=0;HaplotypeScore=156.9431;InbreedingCoeff=-0.1320;MQ=49.78;MQ0=20;MQRankSum=2.670;QD=9.20;ReadPosRankSum=-4.162;VQSLOD=1.1863;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:44.80:467,45,0	0/1:10,0:10:30.98:55,0,31	./.	0/0:22,0:7:0.47:0,0,1	1/1:12,0:12:18.61:156,19,0	0/0:14,0:14:21.07:0,21,579	0/1:21,0:21:67.46:67,0,417	1/1:23,0:22:23.28:119,23,0	1/1:16,1:17:17.09:342,17,0	0/1:15,0:15:27.51:28,0,670	1/1:3,0:2:2.99:24,3,0	1/1:3,16:19:6.02:242,6,0	1/1:8,0:7:9.39:67,9,0	1/1:27,0:27:55.83:527,56,0	0/1:22,0:22:77.85:116,0,78	0/1:14,0:14:33.46:33,0,468	0/1:30,0:28:99:102,0,475	0/1:19,0:15:51.28:51,0,481	1/1:23,0:23:29.82:177,30,0	1/1:11,0:9:10.08:67,10,0	1/1:32,0:32:28.13:337,28,0	0/1:9,0:9:40.90:41,0,163	0/1:9,0:9:40.43:40,0,82	0/1:29,0:28:99:265,0,457	0/1:9,0:9:12.92:13,0,383	1/1:17,0:16:35.94:404,36,0	1/1:2,19:21:3.65:123,4,0	1/1:10,0:10:26.90:177,27,0
chr10	91562669	.	G	GA	863.20	PASS	AB=0.925;AC=24;AF=0.444;AN=54;BaseQRankSum=0.358;DP=406;FS=17.737;HRun=13;HaplotypeScore=70.5374;InbreedingCoeff=0.5633;MQ=45.92;MQ0=34;MQRankSum=-6.679;QD=4.69;ReadPosRankSum=-4.491;VQSLOD=-0.6486;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:22,1:21:20.39:0,20,141	./.	0/0:41,0:5:5.92:0,6,41	0/1:40,0:8:14.34:14,0,41	1/1:6,3:16:20.16:111,20,0	0/0:13,0:13:14.90:0,15,112	0/0:18,0:16:32.56:0,33,218	1/1:9,6:13:24.38:197,24,0	1/1:5,2:6:8.88:64,9,0	0/0:10,0:10:10.99:0,11,44	0/1:7,0:10:2.12:2,0,32	1/1:4,4:8:9:79,9,0	0/0:1,0:5:6.74:0,7,23	1/1:4,3:7:9.34:58,9,0	0/1:13,0:14:27.33:27,0,69	0/0:8,0:9:8.46:0,8,26	0/0:20,0:20:19.46:0,19,129	0/0:30,0:31:52.42:0,52,353	0/1:7,5:10:12.39:58,0,12	1/1:5,5:9:6.01:56,6,0	1/1:7,1:7:3.47:28,3,0	0/0:6,0:6:0.73:0,1,2	0/0:6,0:8:9.71:0,10,29	0/0:8,0:7:8.06:0,8,25	0/0:12,0:15:18.52:0,19,74	1/1:8,6:13:10.20:158,10,0	1/1:5,3:7:14.93:125,15,0	1/1:8,1:7:8.96:74,9,0
chr10	91562692	.	A	AG	3365.43	PASS	AB=0.778;AC=51;AF=0.911;AN=56;BaseQRankSum=-3.481;DP=462;FS=9.782;HRun=8;HaplotypeScore=73.0131;InbreedingCoeff=0.5513;MQ=59.77;MQ0=17;MQRankSum=-1.546;QD=10.26;ReadPosRankSum=2.558;VQSLOD=1.4407;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,2:17:5.81:34,6,0	1/1:0,2:3:2.84:14,3,0	0/0:68,0:18:24.58:0,25,224	0/0:64,0:17:8.41:0,8,174	1/1:11,0:15:2.71:14,3,0	1/1:4,7:12:23.90:254,24,0	1/1:4,11:15:17.95:187,18,0	1/1:11,0:12:11.70:72,12,0	1/1:6,0:8:8.66:50,9,0	1/1:9,8:17:23.63:255,24,0	1/1:11,6:17:29.98:304,30,0	1/1:4,0:7:7.37:40,7,0	1/1:6,2:8:15.02:151,15,0	1/1:3,0:7:11.57:65,12,0	1/1:11,0:22:11.32:56,11,0	1/1:5,4:10:20.71:223,21,0	1/1:9,0:19:20.09:110,20,0	1/1:6,24:32:48:531,48,0	1/1:4,0:5:8.66:49,9,0	1/1:6,0:8:2.84:14,3,0	0/1:5,0:7:0:0,0,0	1/1:1,9:9:24:258,24,0	1/1:5,2:8:17.86:171,18,0	1/1:16,3:15:20.99:189,21,0	1/1:9,5:16:18.04:195,18,0	1/1:10,0:13:11.90:60,12,0	1/1:6,0:7:2.94:18,3,0	1/1:3,0:5:8.72:50,9,0
chr10	91562875	.	TA	T	2821.01	PASS	AB=0.857;AC=23;AF=0.411;AN=56;BaseQRankSum=6.473;DP=546;FS=3.472;HRun=13;HaplotypeScore=56.0773;InbreedingCoeff=0.8079;MQ=51.26;MQ0=26;MQRankSum=0.239;QD=12.11;ReadPosRankSum=-1.208;VQSLOD=3.2070;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:78.06:0,78,742	0/0:6,0:6:15.02:0,15,142	0/1:5,1:5:12.93:13,0,71	0/0:1,1:1:3:0,3,28	1/1:4,11:14:32.39:240,32,0	0/0:19,1:19:0.33:0,0,309	0/0:25,1:15:19.96:0,20,329	1/1:12,15:23:44.65:322,45,0	1/1:2,24:25:62.63:459,63,0	0/0:22,0:20:33:0,33,310	0/0:17,0:14:20.86:0,21,184	1/1:4,20:22:28.33:309,28,0	0/0:19,0:17:38.99:0,39,360	1/1:3,11:12:26.82:197,27,0	0/0:17,0:16:39.04:0,39,369	0/0:24,2:24:30.01:0,30,430	0/0:29,0:28:72.07:0,72,687	0/0:35,1:33:56.18:0,56,694	1/1:9,16:23:26.48:337,26,0	1/1:6,13:18:17.52:241,18,0	1/1:2,15:17:34.31:260,34,0	0/0:5,0:5:12.02:0,12,116	0/0:17,1:12:2.13:0,2,178	0/0:16,0:17:20.87:0,21,190	0/0:19,0:17:36.01:0,36,340	1/1:11,17:25:9.74:233,10,0	1/1:3,15:18:37.80:268,38,0	1/1:2,10:12:4.81:153,5,0
chr10	91564103	.	T	TGG	4862.99	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-6.756;DP=671;FS=9.839;HRun=8;HaplotypeScore=89.1429;InbreedingCoeff=0.9967;MQ=95.05;MQ0=0;MQRankSum=-4.259;QD=28.61;ReadPosRankSum=2.631;VQSLOD=4.0798;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,128,1397	0/0:6,0:6:15.03:0,15,167	0/0:33,0:34:83.89:0,84,886	0/0:31,0:31:62.82:0,63,674	0/0:17,0:17:39.10:0,39,434	0/0:21,0:21:57.14:0,57,635	0/0:25,0:25:57.13:0,57,634	0/0:35,0:36:75.13:0,75,816	0/0:31,0:31:75.17:0,75,825	1/1:13,10:23:32.60:472,33,0	1/1:4,16:21:45.11:679,45,0	0/0:23,0:23:59.55:0,60,668	1/1:3,18:22:48.16:758,48,0	0/0:21,0:21:54.14:0,54,602	0/0:28,0:28:69.16:0,69,769	1/1:5,23:28:54.18:857,54,0	0/0:25,0:24:72.17:0,72,791	0/0:13,0:14:35.82:0,36,380	0/0:13,0:13:36.09:0,36,390	0/0:29,0:29:66.01:0,66,708	0/0:38,0:38:93.19:0,93,1015	1/1:3,11:14:33.11:500,33,0	1/1:6,11:19:29.93:453,30,0	1/1:4,19:23:48.16:762,48,0	1/1:4,15:20:23.96:381,24,0	0/0:26,0:26:69.18:0,69,768	0/0:20,0:20:54.15:0,54,601	0/0:13,0:13:30.08:0,30,334
chr10	91565546	.	A	AAGAG	2621.92	PASS	AB=1.000;AC=49;AF=0.907;AN=54;BaseQRankSum=-0.147;DP=519;FS=0.000;HRun=0;HaplotypeScore=121.3883;InbreedingCoeff=0.0918;MQ=72.40;MQ0=16;MQRankSum=1.556;QD=5.30;ReadPosRankSum=-1.263;VQSLOD=1.9022;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:24:12:139,12,0	0/1:4,0:4:0:0,0,0	./.	0/1:40,0:23:0:1,0,0	1/1:18,0:18:3.01:67,3,0	1/1:21,0:21:17.98:371,18,0	1/1:22,0:22:9.50:179,10,0	1/1:33,0:33:24.05:299,24,0	1/1:15,0:15:2.97:40,3,0	1/1:12,0:12:5.98:73,6,0	1/1:11,0:13:6.02:88,6,0	1/1:20,0:20:6.01:68,6,0	1/1:13,0:17:3:52,3,0	1/1:16,0:15:3.01:43,3,0	1/1:25,0:24:3.01:67,3,0	1/1:26,0:26:21.06:337,21,0	1/1:10,0:12:6.91:106,7,0	1/1:10,0:18:9.24:134,9,0	1/1:15,0:13:3.01:52,3,0	0/1:14,0:14:0:0,0,0	0/1:16,0:16:0:0,0,0	1/1:20,0:20:6.02:136,6,0	1/1:15,0:15:3.01:70,3,0	1/1:18,8:27:3.01:71,3,0	1/1:11,0:11:3.01:50,3,0	1/1:13,0:10:3.01:44,3,0	0/1:17,0:16:18.07:177,0,18	1/1:8,0:8:3.01:43,3,0
chr10	91565893	.	GACACACACACACACAC	G	763.22	PASS	AB=0.767;AC=5;AF=0.096;AN=52;BaseQRankSum=4.570;DP=485;FS=23.252;HRun=0;HaplotypeScore=183.2827;InbreedingCoeff=0.4937;MQ=55.78;MQ0=15;MQRankSum=-4.519;QD=13.88;ReadPosRankSum=-0.030;VQSLOD=0.9593;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,10:32:20.53:98,0,21	1/1:1,0:3:6.02:223,6,0	./.	./.	0/0:12,0:12:15.05:0,15,871	0/0:24,0:22:24.17:0,24,934	0/0:20,0:20:6.96:0,7,218	0/0:13,0:13:17.86:0,18,131	0/0:6,0:6:6.02:0,6,403	0/0:9,0:9:17.27:0,17,805	0/0:5,0:5:9.01:0,9,431	0/0:30,0:28:35.55:0,36,2353	0/0:12,0:12:12.93:0,13,394	0/0:12,0:11:21:0,21,986	1/1:11,0:19:15.05:558,15,0	0/0:15,0:15:20.08:0,20,721	0/0:25,0:25:10.79:0,11,45	0/0:25,0:24:30.07:0,30,1211	0/0:11,0:11:12.03:0,12,453	0/0:10,0:10:3.48:0,3,190	0/0:42,0:37:54.15:0,54,3031	0/0:13,0:14:12.04:0,12,560	0/0:14,0:14:8.92:0,9,269	0/0:39,0:35:36.02:0,36,1353	0/0:12,0:12:18.06:0,18,998	0/0:5,0:5:6.02:0,6,287	0/0:14,0:14:9.03:0,9,493	0/0:9,0:7:12.04:0,12,720
chr10	91565949	.	C	CACAT	6713.96	PASS	AB=0.928;AC=45;AF=0.804;AN=56;BaseQRankSum=-5.116;DP=614;FS=18.508;HRun=0;HaplotypeScore=112.4489;InbreedingCoeff=0.1621;MQ=61.08;MQ0=23;MQRankSum=1.563;QD=12.14;ReadPosRankSum=5.543;VQSLOD=2.6209;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:29:38.83:302,39,0	0/1:5,0:4:12.13:17,0,12	0/0:33,0:20:44.04:0,44,479	0/0:28,0:17:20.24:0,20,373	0/1:18,0:18:8.44:284,0,8	0/1:21,0:20:11.15:166,0,11	1/1:19,0:17:28.93:239,29,0	1/1:22,0:18:39.56:377,40,0	0/1:13,0:13:15.42:133,0,15	1/1:28,0:28:19.88:461,20,0	1/1:18,0:17:8.96:190,9,0	0/1:28,0:26:99:239,0,170	1/1:16,0:15:22.16:302,22,0	1/1:21,0:19:44.93:399,45,0	1/1:19,0:19:2.39:177,2,0	0/1:3,18:22:13.99:14,0,60	1/1:13,0:13:27.86:205,28,0	1/1:27,0:26:26.42:385,26,0	1/1:6,0:5:10.20:74,10,0	0/1:22,0:20:7.17:233,0,7	1/1:44,0:43:2.39:596,2,0	1/1:20,0:20:15.05:319,15,0	1/1:16,0:16:29.88:235,30,0	1/1:22,0:20:4.37:267,4,0	1/1:32,0:32:17.14:376,17,0	1/1:25,0:22:55.61:474,56,0	1/1:2,0:28:8.92:51,9,0	1/1:14,0:11:24.56:198,25,0
chr10	91566965	.	C	CAA	11458.05	PASS	AB=0.987;AC=54;AF=0.964;AN=56;BaseQRankSum=-3.629;DP=688;FS=2.141;HRun=13;HaplotypeScore=156.5932;InbreedingCoeff=0.0262;MQ=53.92;MQ0=18;MQRankSum=-2.131;QD=16.65;ReadPosRankSum=0.703;VQSLOD=2.4771;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,7:24:50.65:482,51,0	1/1:8,6:15:18.04:216,18,0	0/1:36,0:15:13.27:13,0,77	0/1:20,0:7:14.87:15,0,39	1/1:24,0:22:41.75:376,42,0	1/1:25,0:24:50.78:448,51,0	1/1:21,0:16:31.72:311,32,0	1/1:39,3:40:57.02:627,57,0	1/1:25,0:25:54.07:535,54,0	1/1:37,0:36:61.73:565,62,0	1/1:27,1:28:58.17:554,58,0	1/1:16,1:17:32.97:336,33,0	1/1:22,1:22:59.95:590,60,0	1/1:15,1:15:23.74:217,24,0	1/1:9,7:20:12.67:381,13,0	1/1:23,2:24:59.69:598,60,0	1/1:16,11:26:36.45:487,36,0	1/1:22,1:21:7.44:229,7,0	1/1:16,0:14:31.51:274,32,0	1/1:23,1:27:71.22:617,71,0	1/1:15,1:15:24.48:220,24,0	1/1:25,2:27:68.98:670,69,0	1/1:23,0:26:53.13:470,53,0	1/1:14,0:14:37.63:402,38,0	1/1:25,1:26:53.77:523,54,0	1/1:26,1:26:31.66:371,32,0	1/1:35,1:35:62.37:618,62,0	1/1:14,0:14:32.96:314,33,0
chr10	91566975	.	A	AAC	17219.33	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=-4.265;DP=716;FS=0.000;HRun=0;HaplotypeScore=159.3257;InbreedingCoeff=0.3241;MQ=56.31;MQ0=16;MQRankSum=0.549;QD=27.20;ReadPosRankSum=5.565;VQSLOD=5.6978;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:80.98:81,0,86	0/1:15,0:15:47.77:48,0,90	0/0:49,0:22:1.75:0,2,271	0/0:34,0:16:19.24:0,19,171	1/1:11,10:19:44.64:621,45,0	1/1:5,12:18:50.18:680,50,0	1/1:5,14:17:44.68:594,45,0	1/1:11,26:37:74.64:1177,75,0	1/1:6,14:23:60.71:931,61,0	1/1:20,14:35:73.16:953,73,0	1/1:12,11:27:68.56:849,69,0	1/1:13,8:21:53.21:580,53,0	1/1:9,16:23:68.92:940,69,0	1/1:7,6:14:34.60:404,35,0	0/1:20,0:20:94.77:95,0,109	1/1:11,16:26:59.48:942,59,0	0/1:26,0:24:64.77:148,0,65	1/1:9,9:18:27.51:417,28,0	1/1:6,9:14:24.52:467,25,0	1/1:13,17:32:78.55:1065,79,0	1/1:8,9:16:23.83:449,24,0	1/1:9,18:28:74.83:1035,75,0	1/1:13,10:24:50.74:607,51,0	1/1:6,12:19:53.71:689,54,0	1/1:15,16:30:77.68:1000,78,0	1/1:13,11:25:14.68:653,15,0	1/1:21,17:39:99:1208,109,0	1/1:5,10:16:45.05:587,45,0
chr10	91567000	.	T	TAAACAAAC	12576.32	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=5.525;DP=776;FS=6.070;HRun=0;HaplotypeScore=270.5353;InbreedingCoeff=0.9753;MQ=55.63;MQ0=14;MQRankSum=-6.672;QD=18.44;ReadPosRankSum=6.055;VQSLOD=3.1399;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,14:25:33.11:1259,33,0	1/1:5,8:16:24.08:989,24,0	0/0:48,0:33:34.03:0,34,661	0/0:46,0:32:48.75:0,49,872	1/1:11,0:25:35.95:301,36,0	1/1:9,0:21:32.95:270,33,0	1/1:11,0:23:26.96:221,27,0	1/1:31,0:28:20.99:207,21,0	1/1:12,0:29:53.93:491,54,0	1/1:11,0:36:68.86:583,69,0	1/1:12,0:27:41.95:372,42,0	1/1:5,0:20:41.92:341,42,0	1/1:11,0:26:41.85:336,42,0	1/1:3,0:14:23.97:197,24,0	1/1:11,17:30:36.12:1495,36,0	1/1:9,0:37:71.92:605,72,0	1/1:11,2:13:11.99:377,12,0	1/1:8,0:17:23.97:197,24,0	1/1:13,0:23:41.94:381,42,0	1/1:12,0:33:68.80:550,69,0	1/1:9,0:20:20.98:172,21,0	1/1:10,0:27:47.94:417,48,0	1/1:8,0:24:33.32:260,33,0	1/1:11,0:22:26.98:255,27,0	1/1:11,0:26:52.51:454,53,0	1/1:8,0:35:77.91:666,78,0	1/1:9,0:36:89.85:749,90,0	1/1:3,0:29:50.96:434,51,0
chr10	91572847	.	G	GA	1745.53	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-7.145;DP=447;FS=2.292;HRun=10;HaplotypeScore=45.9096;InbreedingCoeff=0.7381;MQ=60.75;MQ0=3;MQRankSum=0.914;QD=17.46;ReadPosRankSum=2.477;VQSLOD=4.0689;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:33:59.98:622,60,0	1/1:1,5:7:17.85:160,18,0	0/0:8,0:6:17.97:0,18,145	0/0:7,0:3:5.98:0,6,49	0/0:15,1:16:6.93:0,7,257	0/0:11,1:12:12.14:0,12,186	0/0:23,0:24:64.95:0,65,523	0/0:31,0:31:74.90:0,75,614	0/0:10,0:10:26.91:0,27,216	0/0:13,0:13:10.16:0,10,245	0/0:11,0:11:1.22:0,1,171	0/0:16,0:16:38.95:0,39,318	0/0:14,0:14:32.94:0,33,270	0/0:17,0:17:47.95:0,48,394	1/1:3,15:18:36.02:366,36,0	0/0:7,0:7:17.95:0,18,144	1/1:5,25:31:72.05:750,72,0	0/0:36,0:36:95.36:0,95,775	0/0:19,0:19:44.90:0,45,363	0/0:19,0:19:44.93:0,45,366	0/0:20,0:20:50.94:0,51,419	0/0:8,0:8:11.96:0,12,98	0/0:11,0:11:26.94:0,27,217	0/1:11,0:11:5.56:6,0,183	0/0:12,0:12:29.89:0,30,239	0/0:19,0:19:50.92:0,51,419	0/0:13,0:13:29.82:0,30,232	0/0:2,0:1:3:0,3,25
chr10	91572998	.	GCTCTCT	G	923.23	PASS	AB=0.869;AC=25;AF=0.481;AN=52;BaseQRankSum=1.905;DP=543;FS=15.176;HRun=0;HaplotypeScore=130.7997;InbreedingCoeff=0.4376;MQ=56.85;MQ0=33;MQRankSum=3.010;QD=3.66;ReadPosRankSum=4.353;VQSLOD=1.5204;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:20:3:0,3,59	1/1:5,0:6:6.02:84,6,0	./.	./.	0/0:18,0:18:0:0,0,0	0/1:16,0:16:11.98:78,0,12	1/1:12,8:20:5.94:41,6,0	0/0:31,0:30:14.08:0,14,277	0/0:14,0:11:6.49:0,6,150	1/1:16,7:16:4.79:226,5,0	1/1:11,1:10:7.39:31,7,0	0/0:13,0:13:6.02:0,6,108	1/1:10,0:11:9.03:133,9,0	0/1:17,0:17:0.12:0,0,0	1/1:15,0:21:1.55:4,2,0	0/1:8,7:14:17.48:38,0,17	1/1:14,0:17:15:244,15,0	1/1:18,0:17:15.28:159,15,0	0/0:27,0:24:15.05:0,15,307	0/0:14,0:14:6:0,6,73	0/0:27,0:22:12.04:0,12,306	1/1:11,0:12:2.04:6,2,0	1/1:15,0:16:5.03:30,5,0	0/0:16,0:18:0.76:0,1,55	0/1:11,0:17:0:0,0,0	0/1:11,0:23:5.78:6,0,683	0/0:4,0:21:10.38:0,10,174	0/0:20,0:18:9.03:0,9,222
chr10	91573039	.	CTCTCTCTT	C	853.25	PASS	AB=1.000;AC=12;AF=0.231;AN=52;BaseQRankSum=0.789;DP=503;FS=3.672;HRun=0;HaplotypeScore=168.5505;InbreedingCoeff=-0.1974;MQ=38.52;MQ0=52;MQRankSum=5.477;QD=3.40;ReadPosRankSum=2.698;VQSLOD=2.4663;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:24:2.41:0,2,83	1/1:9,0:9:1.46:105,1,0	./.	./.	0/0:11,0:11:7.36:0,7,35	0/1:26,0:25:62.79:71,0,63	0/0:21,0:19:11.41:0,11,51	0/0:20,0:18:48.72:0,49,495	0/0:14,0:11:16.93:0,17,199	0/1:20,0:15:99:199,0,136	0/0:4,10:13:0.89:0,1,2	0/0:15,0:15:5.03:0,5,207	0/1:19,0:16:89.24:150,0,89	0/0:12,0:11:1.18:0,1,27	0/0:24,0:21:4.07:0,4,12	0/1:17,0:16:21.55:22,0,40	0/1:30,0:29:99:219,0,116	0/1:29,0:27:99:107,0,117	0/0:18,0:12:9.50:0,10,345	0/0:12,0:11:16.08:0,16,138	0/1:33,0:27:25.57:26,0,372	0/1:19,0:16:9.24:13,0,9	0/1:15,0:15:10.13:55,0,10	0/1:34,0:29:21.96:22,0,58	0/0:10,0:9:2.04:0,2,6	0/0:17,0:16:0.75:0,1,749	0/0:18,0:15:18.75:0,19,285	0/0:18,0:10:11.88:0,12,355
chr10	91573047	.	TTGTGTGTGTG	T	219.01	PASS	AB=0.830;AC=5;AF=0.096;AN=52;BaseQRankSum=1.942;DP=512;FS=15.077;HRun=0;HaplotypeScore=188.2530;InbreedingCoeff=0.0888;MQ=38.32;MQ0=48;MQRankSum=-2.989;QD=2.21;ReadPosRankSum=-2.238;VQSLOD=1.6930;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,2:23:44.95:45,0,65	1/1:6,3:9:5.93:177,6,0	./.	./.	0/0:11,0:11:6.49:0,6,183	0/0:18,0:26:5.98:0,6,67	0/0:24,0:22:6.49:0,6,135	0/0:21,0:19:9.03:0,9,246	0/0:13,0:10:12.80:0,13,289	0/0:20,0:15:11.16:0,11,196	0/0:14,0:13:4.84:0,5,96	0/0:15,0:15:15.05:0,15,538	0/0:20,0:18:12.68:0,13,112	0/0:13,0:12:6.02:0,6,185	0/1:20,7:25:22.64:25,0,23	0/0:16,0:15:6.02:0,6,92	0/1:25,11:35:68.16:83,0,68	0/0:25,0:25:43.13:0,43,586	0/0:20,0:13:18.06:0,18,642	0/0:8,0:7:6.02:0,6,288	0/0:34,0:28:33.08:0,33,970	0/0:16,0:15:5.17:0,5,38	0/0:17,0:17:16.01:0,16,251	0/0:35,0:31:6.91:0,7,291	0/0:10,0:10:3.01:0,3,50	0/0:18,0:17:27.09:0,27,675	0/0:16,0:13:15.52:0,16,518	0/0:16,0:8:15.05:0,15,481
chr10	91574282	.	GA	G	22284.37	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=10.463;DP=653;FS=11.820;HRun=1;HaplotypeScore=208.3055;InbreedingCoeff=0.9699;MQ=83.73;MQ0=0;MQRankSum=-11.271;QD=36.96;ReadPosRankSum=5.117;VQSLOD=2.1036;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,40:44:99:1549,123,0	1/1:0,10:10:30.10:384,30,0	0/0:25,0:25:51.21:0,51,1031	0/0:25,0:25:71.97:0,72,1068	1/1:3,16:19:53.63:615,54,0	1/1:3,13:16:48.14:616,48,0	1/1:4,23:27:78.23:966,78,0	1/1:2,17:19:51.17:680,51,0	1/1:5,25:30:90.27:1174,90,0	1/1:1,15:17:51.12:626,51,0	1/1:1,11:12:33.10:413,33,0	1/1:2,31:33:98.91:1296,99,0	1/1:0,25:25:75.24:992,75,0	1/1:2,19:21:63.18:818,63,0	1/1:4,24:28:84.26:1099,84,0	1/1:1,33:34:99:1382,102,0	1/1:4,34:38:99:1427,105,0	1/1:0,24:24:72.24:980,72,0	1/1:1,14:15:39.13:528,39,0	1/1:2,12:14:39.10:484,39,0	1/1:0,29:29:78.24:981,78,0	1/1:2,18:20:54.17:696,54,0	1/1:1,8:9:27.07:325,27,0	1/1:1,35:36:90.28:1192,90,0	1/1:1,17:18:54.17:697,54,0	1/1:3,22:25:63.21:835,63,0	1/1:7,30:37:99:1412,111,0	1/1:0,3:3:9.03:117,9,0
chr10	91574285	.	TG	T	20003.68	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=10.716;DP=654;FS=12.285;HRun=2;HaplotypeScore=217.7255;InbreedingCoeff=0.9828;MQ=86.36;MQ0=0;MQRankSum=-11.938;QD=33.40;ReadPosRankSum=6.043;VQSLOD=1.7812;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,40:43:99:1382,117,0	1/1:1,10:11:30.07:346,30,0	0/0:29,0:29:81.23:0,81,1182	0/0:26,0:26:75.07:0,75,1059	1/1:2,17:19:47.70:514,48,0	1/1:3,13:16:47.63:555,48,0	1/1:2,23:25:74.58:834,75,0	1/1:2,17:19:57.15:677,57,0	1/1:3,25:28:83.41:984,83,0	1/1:2,15:17:50.34:563,50,0	1/1:1,11:12:33.09:381,33,0	1/1:3,31:34:99:1253,102,0	1/1:1,25:26:75.22:911,75,0	1/1:1,20:21:63.16:753,63,0	1/1:2,24:26:78.23:956,78,0	1/1:1,33:34:99:1287,102,0	1/1:5,34:39:99:1304,105,0	1/1:1,24:25:75.21:929,75,0	1/1:1,14:15:42.12:514,42,0	1/1:1,12:13:35.47:403,35,0	1/1:1,29:33:70.01:782,70,0	1/1:1,18:19:51.15:605,51,0	1/1:0,8:8:24.07:277,24,0	1/1:1,35:36:90.27:1104,90,0	1/1:2,17:19:48.14:576,48,0	1/1:3,22:25:66.19:797,66,0	1/1:2,30:32:96.30:1171,96,0	1/1:1,3:4:12.04:144,12,0
chr10	91575158	.	TG	T	3083.04	PASS	AB=0.625;AC=51;AF=0.911;AN=56;BaseQRankSum=-3.334;DP=446;FS=1.160;HRun=12;HaplotypeScore=66.5544;InbreedingCoeff=0.4808;MQ=73.00;MQ0=0;MQRankSum=-1.423;QD=7.39;ReadPosRankSum=4.449;VQSLOD=2.2389;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:30:41.97:122,42,0	1/1:2,0:7:6.11:18,6,0	0/0:19,0:13:23.83:0,24,207	0/0:10,0:9:3.58:0,4,44	1/1:1,6:7:8.93:70,9,0	1/1:6,7:13:17.90:139,18,0	1/1:8,21:33:55.15:378,55,0	1/1:8,8:16:8.91:67,9,0	1/1:2,12:14:17.92:139,18,0	1/1:7,0:7:2.66:7,3,0	1/1:10,0:10:0.87:2,1,0	1/1:3,12:15:29.88:232,30,0	1/1:12,0:12:4.69:12,5,0	1/1:2,11:16:27.96:197,28,0	1/1:0,0:26:40.74:120,41,0	1/1:2,18:22:27.97:197,28,0	1/1:4,0:33:46.83:138,47,0	1/1:4,9:13:17.92:138,18,0	0/1:6,9:15:25.89:156,0,26	1/1:2,9:12:22.95:168,23,0	1/1:9,23:35:50.90:366,51,0	1/1:8,0:8:2.92:8,3,0	1/1:7,0:7:4.47:12,4,0	1/1:11,0:11:2.01:5,2,0	1/1:5,0:5:0.66:2,1,0	1/1:10,7:17:20.89:162,21,0	1/1:3,20:24:40.86:308,41,0	1/1:3,4:7:5.98:46,6,0
chr10	91575168	.	GGGA	G	1076.06	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=6.966;DP=491;FS=4.015;HRun=0;HaplotypeScore=95.8016;InbreedingCoeff=0.6268;MQ=75.90;MQ0=0;MQRankSum=-2.158;QD=6.90;ReadPosRankSum=6.322;VQSLOD=1.9195;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:30:62.98:192,0,63	0/1:7,0:7:15.36:32,0,15	0/0:19,0:13:30.86:0,31,517	0/0:14,0:13:12.01:0,12,185	0/0:14,0:14:39.04:0,39,392	0/0:11,0:11:30.05:0,30,320	0/0:36,0:36:91.32:0,91,840	0/0:16,0:16:32.94:0,33,304	0/0:19,0:19:38.88:0,39,407	1/1:11,0:11:24.21:160,24,0	1/1:6,0:6:8.28:41,8,0	0/0:18,0:18:48.07:0,48,493	1/1:9,1:10:10.49:74,10,0	0/0:21,0:21:56.25:0,56,563	1/1:28,0:28:10.51:201,11,0	0/0:25,0:25:41.25:0,41,375	0/1:34,0:34:39.23:252,0,39	0/0:16,0:16:39.07:0,39,456	0/0:19,0:19:54.05:0,54,596	0/0:18,0:18:44.62:0,45,422	0/0:35,0:34:76.91:0,77,749	1/1:6,1:7:13.02:124,13,0	1/1:4,2:6:10.96:116,11,0	1/1:9,0:9:9.72:31,10,0	0/1:7,0:7:12.26:45,0,12	0/0:19,0:19:24.52:0,25,425	0/0:27,0:27:59.49:0,59,592	0/0:8,0:8:18.02:0,18,179
chr10	91575169	.	GGA	G	972.48	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-1.548;DP=497;FS=0.000;HRun=0;HaplotypeScore=89.3656;InbreedingCoeff=0.9571;MQ=76.53;MQ0=0;MQRankSum=-0.174;QD=17.37;ReadPosRankSum=-0.181;VQSLOD=3.4608;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:72.66:0,73,364	0/0:7,0:7:10.64:0,11,57	0/0:19,0:13:29.19:0,29,433	0/0:15,0:14:15.25:0,15,168	0/0:14,0:14:38.72:0,39,314	0/0:11,0:11:29.55:0,30,217	0/0:36,0:36:72.17:0,72,520	0/0:16,0:16:29.49:0,29,230	0/0:19,0:19:38.08:0,38,256	1/1:8,3:11:29.99:309,30,0	1/1:1,5:6:8.80:73,9,0	0/0:19,0:19:46.76:0,47,329	1/1:2,8:10:11.79:145,12,0	0/0:23,0:23:48.72:0,49,392	0/0:29,0:29:60.33:0,60,318	0/0:25,0:25:31.68:0,32,220	0/0:34,0:34:72.75:0,73,353	0/0:16,0:16:28.75:0,29,263	0/0:20,0:20:39.53:0,40,412	0/0:19,0:19:42.47:0,42,316	0/0:35,0:34:56.58:0,57,439	1/1:6,1:7:20.96:183,21,0	1/1:5,1:6:14.84:123,15,0	1/1:6,2:9:12.04:158,12,0	1/1:7,0:7:17.96:172,18,0	0/0:18,0:18:16.35:0,16,276	0/0:27,0:27:53.87:0,54,372	0/0:8,0:8:17.84:0,18,135
chr10	91576919	.	CTTT	C	3206.43	PASS	AB=0.674;AC=39;AF=0.696;AN=56;BaseQRankSum=-7.214;DP=481;FS=0.000;HRun=16;HaplotypeScore=76.2768;InbreedingCoeff=0.2546;MQ=61.91;MQ0=12;MQRankSum=1.361;QD=8.35;ReadPosRankSum=2.749;VQSLOD=-0.5114;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,1:30:3.62:4,0,70	0/1:3,0:7:0.17:12,0,0	0/0:17,0:5:4.25:0,4,30	0/0:27,0:13:8.98:0,9,91	1/1:5,11:19:22.34:215,22,0	1/1:5,5:12:10.34:112,10,0	1/1:7,12:20:7.28:219,7,0	0/1:12,6:17:4.26:105,0,4	1/1:8,6:14:14.22:160,14,0	1/1:9,9:18:23.71:251,24,0	1/1:10,3:16:11.64:126,12,0	0/1:7,4:11:15.14:55,0,15	0/1:4,10:14:1.82:143,0,2	1/1:5,6:10:1.44:158,1,0	0/0:6,0:17:11.21:0,11,25	0/1:7,6:14:11.38:98,0,11	0/0:11,0:33:22.77:0,23,114	1/1:12,11:22:7.24:219,7,0	0/1:11,5:17:3.37:141,0,3	1/1:2,11:16:16.04:161,16,0	1/1:10,3:16:8.17:108,8,0	1/1:3,7:10:5.93:65,6,0	1/1:3,7:10:11.84:129,12,0	1/1:5,13:23:17.21:246,17,0	1/1:6,13:19:14.89:161,15,0	0/1:9,10:20:15.16:228,0,15	1/1:8,9:16:20.77:226,21,0	0/1:2,1:3:3.48:26,0,3
chr10	91577834	.	C	CATCT	39927.91	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-9.304;DP=762;FS=13.188;HRun=0;HaplotypeScore=113.5440;InbreedingCoeff=0.9975;MQ=80.89;MQ0=2;MQRankSum=-10.249;QD=56.16;ReadPosRankSum=5.956;VQSLOD=5.8609;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,27:37:69.24:1793,69,0	1/1:1,9:10:21.07:546,21,0	0/0:25,0:25:57.18:0,57,976	0/0:26,0:26:62.43:0,62,1058	1/1:10,29:40:75.26:1944,75,0	1/1:0,23:26:66.23:1714,66,0	1/1:6,25:32:72.25:1869,72,0	1/1:13,14:30:69.22:1694,69,0	1/1:3,23:28:60.21:1557,60,0	1/1:7,24:31:78.21:1833,78,0	1/1:2,20:22:48.16:1245,48,0	1/1:5,25:31:72.25:1844,72,0	1/1:4,23:27:72.25:1847,72,0	1/1:5,12:18:39.13:1010,39,0	1/1:3,31:33:84.29:2181,84,0	1/1:5,23:29:72.25:1870,72,0	1/1:3,20:24:50.24:1322,50,0	1/1:3,18:23:45.02:1127,45,0	1/1:15,12:29:45.14:1099,45,0	1/1:4,33:39:90.31:2314,90,0	1/1:6,20:26:42.14:1091,42,0	1/1:6,25:36:73.80:1872,74,0	1/1:1,14:15:39.13:1012,39,0	1/1:6,13:19:33.11:856,33,0	1/1:4,16:21:45.15:1168,45,0	1/1:3,30:33:90.31:2338,90,0	1/1:6,28:35:75.26:1927,75,0	1/1:4,10:14:33.11:856,33,0
chr10	91578653	.	TG	T	5079.94	PASS	AC=54;AF=1.000;AN=54;DP=272;FS=0.000;HRun=9;HaplotypeScore=155.4066;InbreedingCoeff=0.1542;MQ=50.18;MQ0=3;QD=18.75;VQSLOD=3.2307;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:6:8.15:24,8,0	1/1:0,0:3:6.11:18,6,0	1/1:6,0:4:1.97:6,2,0	./.	1/1:2,7:9:15.01:137,15,0	1/1:2,8:10:24.01:219,24,0	1/1:1,10:11:24:220,24,0	1/1:3,9:12:27.01:247,27,0	1/1:3,7:10:21.01:192,21,0	1/1:2,13:15:39.02:356,39,0	1/1:3,6:8:18.01:165,18,0	1/1:3,14:17:42.01:384,42,0	1/1:1,11:12:33.02:302,33,0	1/1:3,12:15:36.02:329,36,0	1/1:2,0:7:8.15:24,8,0	1/1:1,10:11:30.02:274,30,0	1/1:1,0:8:14.26:42,14,0	1/1:0,12:11:30.01:275,30,0	1/1:6,5:11:14.99:137,15,0	1/1:1,10:11:24.01:219,24,0	1/1:0,8:9:21.01:192,21,0	1/1:2,3:5:9:82,9,0	1/1:0,6:6:12.01:110,12,0	1/1:1,13:12:21.01:192,21,0	1/1:1,15:16:36.02:329,36,0	1/1:1,12:13:33.02:302,33,0	1/1:2,9:11:27.01:247,27,0	1/1:0,2:2:6:55,6,0
chr10	91578745	.	C	CAAAGGA	7538.23	PASS	AB=0.923;AC=50;AF=0.926;AN=54;BaseQRankSum=-0.160;DP=321;FS=2.368;HRun=0;HaplotypeScore=101.4516;InbreedingCoeff=0.0304;MQ=31.44;MQ0=7;MQRankSum=-1.528;QD=23.71;ReadPosRankSum=-2.178;VQSLOD=4.2710;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:20:20.30:91,0,20	1/1:4,0:4:2.25:19,2,0	0/1:4,0:1:0:0,0,0	./.	1/1:6,0:7:9.02:163,9,0	1/1:8,0:8:18.06:271,18,0	1/1:9,0:15:19.88:403,20,0	1/1:10,1:23:59.84:955,60,0	1/1:9,0:9:18.03:269,18,0	1/1:18,0:18:42.39:571,42,0	0/1:7,0:4:3.18:77,0,3	1/1:10,0:9:18.46:248,18,0	1/1:6,0:6:12.04:196,12,0	1/1:8,0:8:21.07:330,21,0	1/1:15,0:15:6.53:148,7,0	1/1:6,14:19:18.95:438,19,0	1/1:4,0:10:4.26:47,4,0	1/1:6,8:16:20.09:424,20,0	1/1:12,0:11:22.32:350,22,0	1/1:7,0:7:9.01:134,9,0	0/1:5,4:9:19.47:137,0,19	1/1:16,0:19:36.86:604,37,0	1/1:8,0:7:6.80:59,7,0	1/1:9,0:9:15.05:223,15,0	1/1:7,2:10:18.02:388,18,0	1/1:10,0:10:21.04:341,21,0	1/1:22,0:21:37.37:595,37,0	1/1:4,0:4:5.98:58,6,0
chr10	91578746	.	A	AAAGG	6045.35	PASS	AB=0.982;AC=34;AF=0.630;AN=54;BaseQRankSum=-2.896;DP=329;FS=54.648;HRun=0;HaplotypeScore=103.0310;InbreedingCoeff=-0.0887;MQ=31.41;MQ0=7;MQRankSum=-2.685;QD=20.99;ReadPosRankSum=5.665;VQSLOD=1.8968;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:0.52:0,1,28	0/0:4,0:4:5.88:0,6,44	0/0:4,0:1:2.97:0,3,20	./.	0/1:7,0:7:6.07:150,0,6	1/1:8,0:8:18.06:270,18,0	1/1:17,0:15:20.93:350,21,0	1/1:24,0:23:13.83:769,14,0	1/1:10,0:10:20.76:324,21,0	1/1:20,0:20:13.93:477,14,0	0/1:6,1:4:18.84:65,0,19	1/1:11,0:10:1.24:212,1,0	1/1:6,0:6:12.04:187,12,0	1/1:9,0:9:20.59:259,21,0	0/1:16,0:15:10.73:61,0,11	1/1:20,0:19:16.28:289,16,0	0/1:10,0:10:7.80:30,0,8	1/1:16,1:17:0.27:292,0,0	0/1:12,0:11:9.34:271,0,9	0/1:8,0:7:27.35:110,0,27	0/1:9,0:9:22.79:99,0,23	0/1:19,0:19:6.28:446,0,6	0/0:6,2:7:0.56:0,1,12	0/1:9,0:9:3.28:194,0,3	0/1:9,1:10:11.67:257,0,12	1/1:11,0:10:21.04:322,21,0	0/1:24,0:23:4.79:578,0,5	0/1:4,0:4:8.85:32,0,9
chr10	91578748	.	A	AGG	4012.72	PASS	AB=0.874;AC=26;AF=0.481;AN=54;BaseQRankSum=-1.294;DP=315;FS=125.047;HRun=0;HaplotypeScore=93.7527;InbreedingCoeff=-0.3765;MQ=37.88;MQ0=7;MQRankSum=-3.694;QD=15.80;ReadPosRankSum=7.759;VQSLOD=0.6378;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:21.62:0,22,120	0/0:4,0:4:6.02:0,6,79	0/0:7,0:4:2.97:0,3,20	./.	0/1:4,1:6:42.02:109,0,42	1/1:0,7:7:18.06:270,18,0	0/1:17,0:15:67.41:109,0,67	0/1:25,0:24:72.60:545,0,73	1/1:1,8:9:18.06:267,18,0	0/1:11,5:16:96.38:337,0,96	0/1:6,0:4:18.74:19,0,44	0/1:6,5:10:69.70:202,0,70	1/1:3,2:5:9.03:121,9,0	0/1:5,5:10:53.55:202,0,54	0/0:16,0:15:1.68:0,2,65	0/1:18,0:17:6.96:97,0,7	0/1:10,0:10:2.18:2,0,25	0/1:17,0:17:19.26:119,0,19	0/1:5,4:8:62.17:185,0,62	0/1:5,0:4:38.86:39,0,81	0/1:9,0:9:41.23:50,0,41	0/1:13,5:18:99:325,0,180	0/0:7,0:6:11.97:0,12,117	0/1:6,3:9:99:105,0,106	0/1:10,0:10:86.96:150,0,87	1/1:4,5:8:21.07:306,21,0	0/1:11,13:23:99:422,0,127	0/1:4,0:4:25.42:32,0,25
chr10	91579067	.	A	AAGCCTG	7464.10	PASS	AB=0.905;AC=52;AF=0.963;AN=54;BaseQRankSum=5.298;DP=258;FS=52.528;HRun=0;HaplotypeScore=135.7175;InbreedingCoeff=-0.0748;MQ=96.58;MQ0=0;MQRankSum=-7.880;QD=29.16;ReadPosRankSum=2.729;VQSLOD=2.7035;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:32.92:386,33,0	1/1:1,0:1:3.01:56,3,0	0/1:16,1:18:99:172,0,303	0/1:17,1:19:99:122,0,357	1/1:4,0:4:9.02:137,9,0	1/1:17,0:17:45.10:628,45,0	1/1:13,0:13:27.07:363,27,0	1/1:9,0:9:27.08:429,27,0	1/1:10,0:10:26.97:297,27,0	1/1:15,0:15:42.11:655,42,0	1/1:2,0:2:3.01:32,3,0	1/1:14,0:14:42.09:498,42,0	1/1:9,0:9:18.04:235,18,0	1/1:5,0:5:15.05:248,15,0	1/1:14,0:13:39.07:467,39,0	1/1:10,0:10:30.09:469,30,0	1/1:7,0:7:14.78:175,15,0	1/1:6,0:6:18.06:292,18,0	1/1:9,0:9:24.08:440,24,0	./.	1/1:3,0:3:2.97:20,3,0	1/1:7,0:7:18.05:195,18,0	1/1:3,0:3:6.01:58,6,0	1/1:11,0:11:14.69:205,15,0	1/1:5,0:4:8.94:74,9,0	1/1:6,0:6:17.89:253,18,0	1/1:16,0:16:42.12:522,42,0	1/1:3,0:2:3.01:38,3,0
chr10	91579469	.	C	CAA	1365.74	PASS	AB=0.900;AC=52;AF=0.929;AN=56;BaseQRankSum=-0.187;DP=356;FS=5.087;HRun=16;HaplotypeScore=77.4242;InbreedingCoeff=0.3069;MQ=46.15;MQ0=7;MQRankSum=-2.258;QD=4.01;ReadPosRankSum=-0.998;VQSLOD=-0.7366;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,25:40:21.65:183,22,0	1/1:5,0:7:14.87:132,15,0	1/1:26,0:5:1.41:2,1,0	0/0:15,0:3:2.67:0,3,21	1/1:10,0:9:4.82:14,5,0	1/1:9,0:10:13.21:68,13,0	1/1:15,0:15:13.35:52,13,0	1/1:21,0:15:12.92:83,13,0	1/1:9,0:7:5.11:26,5,0	1/1:14,0:14:18.39:75,18,0	1/1:10,0:10:11.84:71,12,0	1/1:10,0:9:6.06:28,6,0	1/1:6,0:5:8.44:34,8,0	1/1:11,0:9:6.32:25,6,0	1/1:15,0:16:0.49:99,0,0	1/1:8,0:6:2.80:7,3,0	0/1:21,4:27:3.14:256,0,3	1/1:14,0:11:9.38:28,9,0	1/1:11,0:8:13.31:69,13,0	1/1:14,0:14:7.48:17,7,0	1/1:7,0:6:4.96:23,5,0	1/1:6,0:6:3.07:11,3,0	0/1:4,0:3:0:0,0,0	1/1:6,0:6:1.72:4,2,0	1/1:10,0:9:12.56:63,13,0	1/1:16,0:15:17.20:82,17,0	1/1:9,0:8:1.01:3,1,0	1/1:2,0:2:1.37:4,1,0
chr10	91580678	.	C	CTT	11514.01	PASS	AB=1.000;AC=54;AF=0.964;AN=56;BaseQRankSum=-5.358;DP=606;FS=5.933;HRun=11;HaplotypeScore=72.6115;InbreedingCoeff=-0.0019;MQ=70.02;MQ0=13;MQRankSum=-0.486;QD=19.00;ReadPosRankSum=4.215;VQSLOD=3.9453;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,23:29:56.66:771,57,0	1/1:5,7:12:21.07:299,21,0	0/1:59,0:25:13.97:14,0,140	0/1:58,0:22:18.40:18,0,122	1/1:12,20:33:62.61:809,63,0	1/1:3,15:20:35.48:472,35,0	1/1:6,12:19:26.58:356,27,0	1/1:12,17:32:60.08:761,60,0	1/1:1,9:10:9.03:130,9,0	1/1:9,16:25:48.12:627,48,0	1/1:7,10:18:38.32:436,38,0	1/1:3,7:11:14.54:182,15,0	1/1:8,10:19:24.44:314,24,0	1/1:5,10:15:18.01:237,18,0	1/1:1,10:11:27.05:367,27,0	1/1:2,15:19:32.08:408,32,0	1/1:2,20:23:47.60:636,48,0	1/1:6,20:28:44.63:602,45,0	1/1:6,15:21:51.14:682,51,0	1/1:9,20:30:62.62:806,63,0	1/1:1,6:7:9.03:130,9,0	1/1:1,14:16:29.08:359,29,0	1/1:0,14:14:30.10:435,30,0	1/1:3,10:15:20.56:270,21,0	1/1:3,15:21:41.62:558,42,0	1/1:4,12:17:38.55:469,39,0	1/1:4,10:15:20.56:269,21,0	1/1:3,5:8:8.52:95,9,0
chr10	91581459	.	C	CAGGGAAACCCA	6128.90	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-7.019;DP=615;FS=6.122;HRun=0;HaplotypeScore=179.0124;InbreedingCoeff=0.8576;MQ=82.16;MQ0=0;MQRankSum=-10.319;QD=50.65;ReadPosRankSum=-0.097;VQSLOD=3.6221;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,14:42:42.14:2207,42,0	1/1:5,4:10:12.04:664,12,0	0/0:19,0:19:41.98:0,42,974	0/0:16,0:17:27.07:0,27,738	0/0:22,0:22:48.07:0,48,1463	0/0:12,0:12:24.07:0,24,728	0/0:25,0:25:63.22:0,63,2058	0/0:34,0:34:62.74:0,63,1826	0/0:11,0:11:27.07:0,27,753	0/0:24,0:24:50.90:0,51,1452	0/0:20,0:20:51.15:0,51,1465	0/0:24,0:24:57.17:0,57,1756	0/0:25,0:25:66.23:0,66,2161	0/0:23,0:23:63.20:0,63,1847	1/1:5,15:29:36.12:1992,36,0	0/0:38,0:38:99:0,99,3149	1/1:9,8:21:24.08:1238,24,0	0/1:19,0:19:29:29,0,1066	0/0:17,0:17:39.12:0,39,1044	0/0:15,0:15:33.11:0,33,1101	0/0:21,0:21:51.17:0,51,1636	0/0:19,0:19:48.11:0,48,1450	0/0:18,0:18:51.18:0,51,1707	0/0:18,0:18:51.14:0,51,1509	0/0:23,0:23:51.18:0,51,1688	0/0:20,0:20:51.16:0,51,1548	0/0:20,0:20:54.19:0,54,1797	0/0:29,0:29:81.26:0,81,2601
chr10	91586996	.	GT	G	565.66	PASS	AB=0.988;AC=44;AF=0.786;AN=56;BaseQRankSum=3.778;DP=556;FS=4.802;HRun=17;HaplotypeScore=104.8827;InbreedingCoeff=-0.0870;MQ=68.14;MQ0=9;MQRankSum=-0.165;QD=1.13;ReadPosRankSum=4.036;VQSLOD=-0.4476;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:2.37:7,2,0	0/1:13,0:13:13.55:14,0,15	0/0:52,2:13:0.21:0,0,14	0/1:39,0:20:8.90:9,0,22	0/1:26,3:29:5.42:81,0,5	1/1:12,0:12:6.98:28,7,0	1/1:18,0:18:14.49:49,14,0	0/1:38,0:39:35.02:48,0,35	1/1:13,0:13:0.23:2,0,0	1/1:18,0:19:4.37:19,4,0	0/1:21,0:21:13.81:14,0,17	1/1:11,0:11:4.84:16,5,0	1/1:17,0:17:12.23:45,12,0	1/1:9,0:9:4.89:13,5,0	1/1:17,0:17:9.46:40,9,0	1/1:11,0:11:5.58:18,6,0	1/1:16,1:17:8.96:44,9,0	0/1:15,0:15:7.79:8,0,12	0/1:16,0:17:18.33:18,0,29	1/1:20,0:19:5.35:27,5,0	0/1:17,0:17:0.61:3,0,1	1/1:16,0:15:4.98:14,5,0	1/1:21,0:21:7.49:23,7,0	1/1:10,0:10:7.13:25,7,0	0/1:22,0:22:21.02:21,0,25	0/1:20,0:20:2.73:17,0,3	1/1:26,0:25:18.41:82,18,0	1/1:12,0:11:5.48:15,5,0
chr10	91587011	.	TTTA	T	4228.73	PASS	AB=0.925;AC=38;AF=0.679;AN=56;BaseQRankSum=3.211;DP=536;FS=25.020;HRun=0;HaplotypeScore=120.4993;InbreedingCoeff=-0.1456;MQ=65.91;MQ0=9;MQRankSum=-2.391;QD=10.00;ReadPosRankSum=7.933;VQSLOD=1.9663;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:33.45:178,33,0	0/1:11,0:11:3.59:58,0,4	0/0:66,0:18:24.70:0,25,211	0/0:47,0:19:33.86:0,34,383	0/1:29,1:30:15.51:283,0,16	0/1:14,0:14:15.34:124,0,15	1/1:9,4:13:27.20:234,27,0	0/1:33,3:36:99:354,0,123	1/1:8,0:8:0.51:37,1,0	0/1:18,0:18:17.73:158,0,18	0/1:21,0:21:54.68:113,0,55	1/1:9,0:9:17.40:84,17,0	1/1:14,2:16:35.78:222,36,0	1/1:8,2:10:19.79:166,20,0	1/1:16,1:17:30.74:247,31,0	1/1:7,2:9:24.44:164,24,0	0/1:16,1:17:9.69:130,0,10	0/1:12,2:14:3.86:164,0,4	0/1:16,1:17:65.57:153,0,66	0/1:17,1:17:22.89:155,0,23	1/1:14,0:14:20.81:92,21,0	1/1:12,1:12:7.35:111,7,0	0/1:9,4:13:16.33:193,0,16	1/1:9,0:9:14.31:78,14,0	0/1:15,3:18:34.54:182,0,35	0/1:14,3:17:51.22:190,0,51	1/1:29,0:28:11.19:241,11,0	0/1:13,2:14:23.43:117,0,23
chr10	91587012	.	TTA	T	8799.90	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.437;DP=506;FS=5.134;HRun=0;HaplotypeScore=94.1424;InbreedingCoeff=0.9345;MQ=66.00;MQ0=9;MQRankSum=-1.675;QD=22.11;ReadPosRankSum=5.830;VQSLOD=5.1218;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,10:17:38.22:407,38,0	1/1:2,9:11:18.06:287,18,0	0/0:62,0:18:24.33:0,24,191	0/0:46,0:18:27.75:0,28,261	1/1:22,7:29:47.22:596,47,0	1/1:9,4:13:26.68:272,27,0	1/1:6,6:13:35.42:330,35,0	1/1:15,20:35:19.99:549,20,0	1/1:1,6:7:14.92:178,15,0	1/1:11,4:16:32.68:309,33,0	1/1:11,7:18:20.70:373,21,0	1/1:3,6:9:26.72:272,27,0	1/1:8,7:15:41.75:386,42,0	1/1:5,2:7:20.91:180,21,0	1/1:12,4:16:46.60:348,47,0	1/1:3,6:9:27.02:279,27,0	1/1:8,9:17:41.50:417,41,0	1/1:3,10:13:15.56:336,16,0	1/1:10,6:16:15.61:300,16,0	1/1:9,9:17:41.09:399,41,0	1/1:2,11:13:26.33:290,26,0	1/1:1,10:11:30.07:342,30,0	1/1:8,4:12:26.01:253,26,0	1/1:2,6:8:23.92:245,24,0	1/1:9,9:18:10.36:399,10,0	1/1:10,4:14:21.64:294,22,0	1/1:19,8:26:70.27:606,70,0	1/1:4,11:14:17.72:155,18,0
chr10	91587013	.	TA	T	6281.16	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.611;DP=480;FS=0.886;HRun=4;HaplotypeScore=93.9411;InbreedingCoeff=0.9740;MQ=66.95;MQ0=9;MQRankSum=-3.966;QD=16.71;ReadPosRankSum=4.313;VQSLOD=4.1157;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,1:17:38.50:258,39,0	1/1:11,0:11:24.89:154,25,0	0/0:61,0:17:18.83:0,19,169	0/0:43,0:18:24.81:0,25,219	1/1:26,1:27:60.30:376,60,0	1/1:10,3:13:38.23:275,38,0	1/1:11,2:13:35.29:233,35,0	1/1:26,2:29:65.19:484,65,0	1/1:7,0:7:14.78:95,15,0	1/1:14,1:15:34.54:247,35,0	1/1:16,1:17:41.40:283,41,0	1/1:8,1:9:26.72:196,27,0	1/1:15,0:15:38.30:242,38,0	1/1:7,0:7:20.71:136,21,0	1/1:13,3:16:47.54:364,48,0	1/1:9,0:9:26.56:168,27,0	1/1:15,0:15:36.97:229,37,0	1/1:13,0:13:32.52:212,33,0	1/1:13,3:16:43.47:329,43,0	1/1:15,1:15:41.38:300,41,0	1/1:12,1:13:26.03:174,26,0	1/1:12,0:11:29.52:186,30,0	1/1:10,0:10:26.53:164,27,0	1/1:6,1:7:20.64:130,21,0	1/1:15,2:17:47.32:328,47,0	1/1:13,0:13:32.43:203,32,0	1/1:25,1:25:59.15:407,59,0	1/1:13,0:12:17.71:110,18,0
chr10	91587090	.	TTCAATTC	T	23200.33	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.367;DP=417;FS=0.000;HRun=0;HaplotypeScore=158.5784;InbreedingCoeff=0.7973;MQ=48.67;MQ0=2;MQRankSum=-7.625;QD=61.70;ReadPosRankSum=5.136;VQSLOD=4.9382;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:21:42.14:1090,42,0	1/1:0,1:1:3.01:78,3,0	0/0:22,0:13:23.50:0,24,981	0/0:19,0:18:51.06:0,51,1644	1/1:3,14:17:36.02:766,36,0	1/1:2,11:13:30.10:779,30,0	1/1:4,19:23:51.18:1324,51,0	1/1:1,15:16:45.07:1023,45,0	1/1:0,18:17:45.15:1168,45,0	1/1:2,10:12:27.09:701,27,0	1/1:4,12:16:35.91:645,36,0	1/1:1,16:16:45.15:1168,45,0	1/1:1,11:12:33.11:857,33,0	1/1:0,10:10:27.09:701,27,0	1/1:2,36:38:99:2803,108,0	1/1:0,18:17:51.18:1324,51,0	1/1:0,12:12:30.09:779,30,0	1/1:1,4:5:12.04:312,12,0	1/1:4,13:16:39.13:1013,39,0	1/1:2,13:15:39.13:1013,39,0	1/1:7,3:10:9.03:218,9,0	1/1:0,5:5:15.05:389,15,0	1/1:0,9:9:24.04:565,24,0	1/1:2,11:13:21.07:520,21,0	1/1:2,7:9:18.06:467,18,0	1/1:0,20:20:60.18:1473,60,0	1/1:1,27:27:75.26:1947,75,0	1/1:0,1:1:3.01:78,3,0
chr10	91587335	.	TA	T	7024.32	PASS	AB=0.723;AC=54;AF=0.964;AN=56;BaseQRankSum=0.421;DP=223;FS=25.977;HRun=1;HaplotypeScore=126.2571;InbreedingCoeff=-0.0547;MQ=57.61;MQ0=0;MQRankSum=-3.392;QD=31.50;ReadPosRankSum=1.741;VQSLOD=2.9931;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:15:30.05:370,30,0	1/1:0,5:5:15.05:194,15,0	0/1:1,3:4:36.04:87,0,36	0/1:5,1:6:31.37:31,0,52	1/1:1,10:11:30.04:343,30,0	1/1:0,14:14:37:469,37,0	1/1:2,8:10:27.08:333,27,0	1/1:0,7:7:18:203,18,0	1/1:1,4:5:15.01:164,15,0	1/1:3,6:9:27.06:324,27,0	1/1:0,10:10:25.39:295,25,0	1/1:0,9:8:19.83:232,20,0	1/1:1,6:7:21.04:247,21,0	1/1:0,7:7:21.07:266,21,0	1/1:0,15:15:40.01:503,40,0	1/1:1,14:15:45.12:564,45,0	1/1:2,11:13:36.89:396,37,0	1/1:0,3:3:9.03:123,9,0	1/1:0,7:7:21.07:280,21,0	1/1:1,8:9:27.06:327,27,0	1/1:0,2:2:3.01:36,3,0	1/1:1,2:3:9.02:99,9,0	1/1:0,5:5:12.51:156,13,0	1/1:0,11:11:21.54:269,22,0	1/1:0,7:7:18.94:235,19,0	1/1:0,3:3:9.03:120,9,0	1/1:1,5:6:18.04:218,18,0	1/1:1,3:4:12.02:141,12,0
chr10	91587345	.	TA	T	6137.99	PASS	AB=0.857;AC=55;AF=0.982;AN=56;BaseQRankSum=1.713;DP=196;FS=14.771;HRun=1;HaplotypeScore=123.7078;InbreedingCoeff=-0.0304;MQ=56.49;MQ0=0;MQRankSum=-1.713;QD=31.32;ReadPosRankSum=1.309;VQSLOD=3.2540;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:26.91:301,27,0	1/1:0,4:4:11.90:130,12,0	1/1:1,3:4:9.01:107,9,0	0/1:5,1:5:28.95:51,0,29	1/1:0,11:11:29.84:329,30,0	1/1:1,11:12:36.02:421,36,0	1/1:1,8:9:27.04:325,27,0	1/1:0,4:4:12.04:159,12,0	1/1:0,4:4:8.89:90,9,0	1/1:0,7:7:20.93:247,21,0	1/1:0,6:6:17.74:160,18,0	1/1:0,11:10:26.96:301,27,0	1/1:1,6:7:20.86:223,21,0	1/1:0,10:10:27.09:339,27,0	1/1:0,13:13:39.08:477,39,0	1/1:0,14:14:42.13:535,42,0	1/1:1,9:10:26.78:278,27,0	1/1:0,1:1:3.01:39,3,0	1/1:0,6:6:18.06:237,18,0	1/1:0,9:9:26.95:319,27,0	1/1:0,1:1:2.88:15,3,0	1/1:0,2:2:5.85:51,6,0	1/1:0,4:4:11.95:129,12,0	1/1:0,10:10:17.76:179,18,0	1/1:0,7:7:20.96:229,21,0	1/1:1,4:5:15.01:175,15,0	1/1:0,5:5:15.05:195,15,0	1/1:0,3:3:8.92:95,9,0
chr10	91587437	.	C	CA	5728.09	PASS	AB=0.661;AC=49;AF=0.907;AN=54;BaseQRankSum=-4.345;DP=242;FS=177.774;HRun=0;HaplotypeScore=234.6753;InbreedingCoeff=-0.0807;MQ=54.25;MQ0=0;MQRankSum=-1.274;QD=23.67;ReadPosRankSum=3.607;VQSLOD=0.0083;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,3:4:9.03:101,9,0	1/1:1,5:6:15.03:162,15,0	0/1:2,2:4:14.14:56,0,14	0/1:3,1:4:6.21:6,0,14	1/1:2,14:16:34.85:345,35,0	1/1:8,11:19:33.09:369,33,0	1/1:2,7:9:21.06:234,21,0	1/1:0,5:5:14.82:140,15,0	1/1:2,7:9:21.06:232,21,0	0/1:5,14:19:99:469,0,127	1/1:1,10:11:30.07:321,30,0	1/1:2,2:4:6.02:67,6,0	1/1:1,8:9:24.06:263,24,0	1/1:4,10:14:30.08:332,30,0	1/1:5,10:15:30.08:324,30,0	1/1:6,9:15:26.91:286,27,0	1/1:1,2:3:6.02:69,6,0	1/1:0,1:1:3.01:36,3,0	./.	1/1:1,11:11:33.02:338,33,0	1/1:0,1:1:3.01:34,3,0	1/1:3,9:12:27.07:297,27,0	1/1:0,14:14:41.59:429,42,0	1/1:1,3:4:6.01:64,6,0	1/1:0,11:11:33.03:361,33,0	0/1:5,6:11:99:185,0,151	0/1:3,5:8:52.85:149,0,53	1/1:0,2:2:6:60,6,0
chr10	91589262	.	C	CTGTCTGTCTGTCTG	14002.53	PASS	AB=0.878;AC=38;AF=0.704;AN=54;BaseQRankSum=-0.193;DP=685;FS=11.394;HRun=0;HaplotypeScore=274.6130;InbreedingCoeff=0.2262;MQ=53.07;MQ0=17;MQRankSum=-5.953;QD=26.17;ReadPosRankSum=8.387;VQSLOD=1.8025;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:12.97:438,13,0	1/1:5,0:6:2.11:273,2,0	0/0:26,0:12:13.75:0,14,497	0/0:56,0:24:41.59:0,42,926	0/1:14,0:13:0.19:0,0,0	1/1:15,0:14:2.77:230,3,0	1/1:5,0:20:9.03:345,9,0	1/1:55,0:52:99:2561,107,0	1/1:9,19:33:15.02:805,15,0	1/1:8,0:21:28.32:593,28,0	0/0:8,0:17:5.84:0,6,24	1/1:19,0:20:4.18:331,4,0	1/1:32,0:32:0.16:492,0,0	0/1:28,0:29:12.51:509,0,13	1/1:39,0:43:12.10:912,12,0	0/1:5,0:30:24.95:180,0,25	1/1:16,0:18:11.46:1120,11,0	1/1:17,0:17:32.11:1051,32,0	1/1:3,11:21:55.41:1582,55,0	0/1:21,0:21:7.71:220,0,8	./.	0/0:14,0:14:12.03:0,12,53	0/1:15,0:15:15.67:18,0,16	0/1:20,0:20:6.16:92,0,6	0/1:21,0:21:89.87:125,0,90	1/1:16,0:16:35.63:875,36,0	0/1:9,9:24:39.13:652,0,39	1/1:11,0:11:16.71:598,17,0
chr10	91589264	.	C	CTGTCTGTCTG	6896.11	PASS	AB=0.995;AC=42;AF=0.778;AN=54;BaseQRankSum=4.331;DP=656;FS=0.605;HRun=0;HaplotypeScore=266.2599;InbreedingCoeff=0.0282;MQ=50.75;MQ0=18;MQRankSum=-4.540;QD=12.12;ReadPosRankSum=5.494;VQSLOD=2.8463;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:3.40:191,3,0	0/1:6,0:6:3.05:224,0,3	0/1:26,0:11:11.20:11,0,424	0/0:53,0:21:34.68:0,35,668	0/1:14,0:12:0.10:0,0,0	1/1:17,0:16:11.68:137,12,0	1/1:19,0:19:9.03:234,9,0	1/1:54,0:51:99:828,99,0	1/1:28,0:28:2.25:475,2,0	0/1:23,0:23:92.39:129,0,92	1/1:17,0:17:5.64:42,6,0	0/1:20,0:21:0.33:286,0,0	0/1:33,0:33:41.37:141,0,41	1/1:27,0:28:16.87:182,17,0	1/1:39,4:43:32.12:737,32,0	1/1:21,0:21:12.04:162,12,0	1/1:16,3:18:14.87:695,15,0	1/1:15,0:15:36.96:450,37,0	1/1:14,0:13:19.77:570,20,0	0/1:22,0:21:3.65:174,0,4	./.	1/1:14,0:14:19.56:122,20,0	0/1:16,0:16:5.03:42,0,5	0/1:19,0:19:10.37:37,0,10	0/1:22,0:22:11.65:12,0,126	1/1:17,0:17:21.99:253,22,0	1/1:21,0:21:28.89:518,29,0	1/1:11,0:11:10.02:246,10,0
chr10	91589270	.	C	CTGTCTG	4098.36	PASS	AB=0.975;AC=23;AF=0.411;AN=56;BaseQRankSum=6.946;DP=653;FS=17.676;HRun=0;HaplotypeScore=226.7438;InbreedingCoeff=-0.2248;MQ=49.29;MQ0=20;MQRankSum=-5.156;QD=8.59;ReadPosRankSum=4.618;VQSLOD=1.1723;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:2.85:135,0,3	0/1:8,0:8:8.22:76,0,8	0/0:24,0:9:16.72:0,17,153	0/0:49,0:18:28.33:0,28,387	0/1:20,0:18:1.22:18,0,1	0/1:20,0:18:49.82:50,0,125	0/0:18,0:18:3.87:0,4,18	0/1:52,0:49:23.36:890,0,23	0/1:29,0:29:9.47:216,0,9	0/1:22,0:22:54.60:55,0,449	0/0:16,0:16:6.49:0,6,111	0/1:9,12:23:18.84:19,0,25	0/1:34,0:34:92.76:93,0,232	0/1:27,0:27:25.44:151,0,25	1/1:43,0:43:8.39:344,8,0	0/1:19,0:19:47.96:73,0,48	0/1:20,0:19:27.39:417,0,27	0/1:15,0:15:12.70:265,0,13	0/1:11,0:10:48.98:304,0,49	0/1:21,0:20:5.34:135,0,5	1/1:35,0:35:6.37:42,6,0	0/0:15,0:15:20.85:0,21,357	0/0:15,0:15:11.99:0,12,187	0/0:19,0:18:8.84:0,9,165	0/0:20,0:20:2.43:0,2,349	1/1:18,0:18:15.56:404,16,0	0/1:17,0:18:13.16:242,0,13	0/1:11,0:11:11.97:171,0,12
chr10	91589447	.	C	CT	2700.54	PASS	AB=0.838;AC=51;AF=0.944;AN=54;BaseQRankSum=-1.542;DP=236;FS=8.869;HRun=12;HaplotypeScore=38.5072;InbreedingCoeff=-0.0251;MQ=58.48;MQ0=3;MQRankSum=-0.475;QD=11.54;ReadPosRankSum=2.435;VQSLOD=2.1383;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,5:6:12.02:117,12,0	1/1:2,3:5:9.01:87,9,0	1/1:16,0:9:1.78:19,2,0	0/1:10,0:6:7.77:8,0,27	1/1:5,7:11:19.84:179,20,0	1/1:1,5:6:8.95:76,9,0	1/1:2,2:4:6.01:58,6,0	1/1:9,5:13:15.50:147,15,0	1/1:2,4:6:11.96:105,12,0	0/1:9,2:11:11.67:66,0,12	1/1:9,7:16:6.64:199,7,0	./.	1/1:4,3:7:11.61:97,12,0	1/1:4,1:5:6:54,6,0	1/1:2,4:6:9.01:87,9,0	1/1:0,4:4:12.02:117,12,0	1/1:2,6:8:18.03:175,18,0	1/1:3,6:9:15.02:146,15,0	1/1:11,10:19:27.03:256,27,0	1/1:5,6:12:17.82:150,18,0	1/1:1,3:4:5.88:44,6,0	0/1:2,1:4:8.39:8,0,16	1/1:2,1:3:3:29,3,0	1/1:1,1:2:3:29,3,0	1/1:4,12:16:18.03:175,18,0	1/1:2,9:11:21.01:197,21,0	1/1:4,1:5:3:29,3,0	1/1:2,5:7:17.24:153,17,0
chr10	91591281	.	AT	A	10683.28	PASS	AB=0.955;AC=53;AF=0.946;AN=56;BaseQRankSum=-5.046;DP=508;FS=10.673;HRun=9;HaplotypeScore=54.1663;InbreedingCoeff=0.6169;MQ=73.77;MQ0=7;MQRankSum=-4.754;QD=21.89;ReadPosRankSum=3.447;VQSLOD=5.1785;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,24:32:86.91:783,87,0	1/1:0,8:8:21.01:192,21,0	0/0:20,0:12:13.16:0,13,113	0/1:20,1:11:18.41:18,0,115	1/1:2,18:19:54.02:493,54,0	1/1:1,17:18:51.03:467,51,0	1/1:4,10:14:17.67:235,18,0	1/1:3,22:23:60.02:544,60,0	1/1:4,14:17:15:306,15,0	1/1:2,26:28:78.01:707,78,0	1/1:1,13:14:39.02:356,39,0	1/1:1,20:21:54.03:494,54,0	1/1:2,8:10:27.01:246,27,0	1/1:1,18:19:48.03:439,48,0	1/1:0,18:18:51.03:467,51,0	1/1:0,16:16:32.39:301,32,0	1/1:3,25:28:71.82:637,72,0	1/1:5,14:19:34.97:351,35,0	1/1:3,21:23:60.01:544,60,0	1/1:0,14:14:42.02:384,42,0	1/1:2,9:11:24.01:220,24,0	1/1:1,8:9:24.01:220,24,0	1/1:2,19:21:48.03:439,48,0	1/1:1,17:18:48.03:439,48,0	1/1:3,11:14:30.01:275,30,0	1/1:3,18:20:54.03:494,54,0	1/1:0,14:14:39.02:357,39,0	1/1:1,12:13:30.02:275,30,0
chr10	91591458	.	A	AT	20980.99	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.587;DP=569;FS=0.000;HRun=2;HaplotypeScore=48.4588;InbreedingCoeff=0.9820;MQ=73.56;MQ0=0;MQRankSum=-6.910;QD=38.85;ReadPosRankSum=4.806;VQSLOD=4.8781;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:72.24:1037,72,0	1/1:0,13:13:36.12:518,36,0	0/0:16,0:16:44.68:0,45,484	0/0:13,0:13:26.83:0,27,327	1/1:0,27:27:78.22:1100,78,0	1/1:0,28:28:81.27:1167,81,0	1/1:1,19:20:54.18:778,54,0	1/1:2,27:29:81.24:1115,81,0	1/1:1,13:14:36.12:518,36,0	1/1:2,17:19:51.17:735,51,0	1/1:0,18:18:54.18:778,54,0	1/1:1,15:16:39.13:562,39,0	1/1:0,12:12:36.12:518,36,0	1/1:0,16:16:45.15:648,45,0	1/1:2,19:21:57.19:821,57,0	1/1:1,24:25:60.20:864,60,0	1/1:1,38:39:99:1599,111,0	1/1:1,9:10:27.09:389,27,0	1/1:5,22:27:66.22:950,66,0	1/1:5,33:38:93.27:1316,93,0	1/1:2,27:29:72.24:1034,72,0	1/1:0,20:20:60.20:864,60,0	1/1:0,24:24:69.23:994,69,0	1/1:0,14:14:36.12:518,36,0	1/1:0,9:9:24.08:346,24,0	1/1:0,22:22:66.22:950,66,0	1/1:1,18:19:48.16:691,48,0	1/1:0,4:4:12.04:173,12,0
chr10	91593278	.	CG	C	2648.98	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.017;DP=637;FS=8.106;HRun=1;HaplotypeScore=59.9406;InbreedingCoeff=0.9992;MQ=87.60;MQ0=0;MQRankSum=-4.880;QD=32.70;ReadPosRankSum=2.706;VQSLOD=2.7190;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:72.24:1006,72,0	1/1:0,11:11:30.10:419,30,0	0/0:26,0:26:75.16:0,75,1085	0/0:19,0:19:48.13:0,48,691	0/0:29,0:29:87.24:0,87,1304	0/0:29,0:29:87.28:0,87,1329	0/0:16,0:16:45.15:0,45,703	0/0:29,0:29:84.10:0,84,1225	0/0:20,0:20:60.16:0,60,905	0/0:27,0:27:81.27:0,81,1245	0/0:24,0:24:69.12:0,69,1023	0/0:18,0:18:51.17:0,51,787	0/0:33,0:33:99:0,99,1485	0/0:12,0:12:36.12:0,36,547	1/1:0,18:18:54.18:755,54,0	0/0:21,0:21:63.20:0,63,962	1/1:0,23:23:45.15:629,45,0	0/0:19,0:19:57.13:0,57,832	0/0:24,0:24:72.20:0,72,1052	0/0:28,0:28:84.23:0,84,1261	0/0:15,0:15:45.14:0,45,677	0/0:21,0:21:63.21:0,63,981	0/0:25,0:25:75.23:0,75,1141	0/0:29,0:29:87.15:0,87,1254	0/0:12,0:12:36.07:0,36,511	0/0:35,0:35:99:0,105,1639	0/0:37,0:37:99:0,111,1718	0/0:8,0:8:24.08:0,24,374
chr10	91593555	.	T	TA	3135.62	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-11.834;DP=601;FS=2.683;HRun=1;HaplotypeScore=56.1620;InbreedingCoeff=0.9968;MQ=74.27;MQ0=0;MQRankSum=-2.602;QD=37.33;ReadPosRankSum=1.691;VQSLOD=4.1415;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:63.21:906,63,0	1/1:0,12:12:33.03:448,33,0	0/0:8,0:8:24.02:0,24,256	0/0:14,0:14:18.96:0,19,207	0/0:35,0:35:99:0,105,1290	0/0:30,0:30:81.23:0,81,1019	0/0:18,0:18:54.14:0,54,667	0/0:40,0:40:99:0,105,1278	0/0:19,0:19:54.17:0,54,690	0/0:19,0:19:51.17:0,51,661	0/0:27,0:27:78.25:0,78,1009	0/0:21,0:21:63.20:0,63,815	0/0:14,0:14:39.13:0,39,505	0/0:12,0:12:36.12:0,36,466	1/1:0,22:22:66.22:950,66,0	0/0:17,0:17:48.13:0,48,594	1/1:1,26:27:69.23:992,69,0	0/0:18,0:18:54.13:0,54,655	0/0:26,0:26:75.22:0,75,944	0/0:27,0:27:78.25:0,78,997	0/0:11,0:11:33.11:0,33,427	0/0:22,0:22:63.17:0,63,774	0/0:24,0:24:72.23:0,72,931	0/0:9,0:9:24.03:0,24,266	0/0:26,0:26:78.23:0,78,973	0/0:30,0:30:90.27:0,90,1141	0/0:26,0:26:78.22:0,78,977	0/0:24,0:24:60.19:0,60,776
chr10	91593717	.	CA	C	1274.55	PASS	AB=0.889;AC=9;AF=0.161;AN=56;BaseQRankSum=11.470;DP=543;FS=1.032;HRun=11;HaplotypeScore=62.1023;InbreedingCoeff=0.8509;MQ=76.66;MQ0=1;MQRankSum=-0.586;QD=13.70;ReadPosRankSum=2.073;VQSLOD=3.9421;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,23:29:62.92:517,63,0	1/1:1,9:10:20.97:172,21,0	0/0:15,0:13:10.70:0,11,79	0/0:13,0:10:10.41:0,10,59	0/0:32,0:32:84.21:0,84,895	0/0:30,0:30:78.13:0,78,796	0/0:13,0:13:30.04:0,30,303	0/0:30,0:30:78.17:0,78,814	0/0:26,0:26:57.09:0,57,595	0/0:18,0:18:51.12:0,51,536	0/0:23,0:23:45.11:0,45,474	0/0:16,0:16:48.12:0,48,509	0/0:16,1:17:20.45:0,20,414	0/0:14,1:15:17.46:0,17,389	1/1:2,17:19:44.95:369,45,0	0/0:21,0:21:48.01:0,48,496	1/1:1,18:19:44.95:369,45,0	0/1:14,2:16:10.16:10,0,313	0/0:19,0:19:57.12:0,57,595	0/0:14,0:14:36.09:0,36,384	0/0:16,0:16:39.10:0,39,416	0/0:24,0:24:57.14:0,57,607	0/0:20,0:20:42.10:0,42,446	0/0:14,1:15:17.46:0,17,391	0/0:10,0:10:21.05:0,21,223	0/0:27,1:28:52.48:0,52,703	0/0:21,1:22:26.30:0,26,461	0/0:12,0:13:29.88:0,30,291
chr10	91595074	.	A	AT	2049.08	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-2.608;DP=232;FS=9.546;HRun=5;HaplotypeScore=43.5951;InbreedingCoeff=0.6498;MQ=67.03;MQ0=0;MQRankSum=-1.773;QD=14.64;ReadPosRankSum=-1.334;VQSLOD=1.5756;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:28.21:0,28,172	0/0:3,0:3:2.74:0,3,12	0/0:7,0:4:6.01:0,6,64	0/1:9,0:7:3.12:3,0,47	1/1:1,5:6:9.03:118,9,0	1/1:9,0:9:11.87:80,12,0	1/1:0,2:2:6.02:79,6,0	1/1:5,20:23:54.08:709,54,0	1/1:1,5:6:9.03:118,9,0	0/0:4,0:4:6.01:0,6,64	0/0:3,0:3:9.02:0,9,97	1/1:2,4:6:6.02:78,6,0	1/1:5,0:5:4.07:12,4,0	1/1:3,0:3:2.97:20,3,0	0/0:2,0:2:2.74:0,3,12	1/1:0,2:2:3.01:39,3,0	0/0:33,0:33:74.39:0,74,513	1/1:17,0:17:8.35:59,8,0	1/1:3,5:8:18:216,18,0	1/1:2,4:6:12.04:158,12,0	1/1:2,5:7:9.03:118,9,0	0/0:1,0:1:3.01:0,3,32	0/0:6,0:6:9.02:0,9,97	0/0:7,0:7:12.02:0,12,125	0/0:15,0:15:4.09:0,4,117	1/1:3,4:7:20.74:246,21,0	1/1:3,4:7:10.54:122,11,0	1/1:15,0:15:8.90:60,9,0
chr10	91595076	.	T	TTTTTATTTATTTATTTATTTATTT	6929.55	PASS	AB=0.680;AC=33;AF=0.589;AN=56;BaseQRankSum=-3.598;DP=242;FS=0.656;HRun=0;HaplotypeScore=130.1767;InbreedingCoeff=0.6786;MQ=61.15;MQ0=0;MQRankSum=-4.474;QD=43.58;ReadPosRankSum=-1.184;VQSLOD=3.6428;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:30.07:0,30,1188	0/0:2,0:2:3.01:0,3,173	0/0:7,0:3:6.01:0,6,63	0/0:9,0:6:5.81:0,6,53	1/1:7,0:7:12.04:177,12,0	1/1:1,0:11:15.05:478,15,0	1/1:2,0:2:6.02:114,6,0	1/1:31,0:28:72.10:1342,72,0	1/1:7,0:7:12.04:436,12,0	0/0:4,0:4:5.95:0,6,50	0/0:3,0:3:9.02:0,9,97	1/1:4,0:4:6.02:92,6,0	1/1:3,0:6:12.04:220,12,0	1/1:0,0:4:3.01:306,3,0	0/0:1,0:1:3.01:0,3,173	1/1:3,0:3:5.81:67,6,0	0/0:33,0:33:81.17:0,81,2847	1/1:6,0:17:13.28:869,13,0	1/1:8,0:8:21.02:386,21,0	1/1:5,0:5:12.04:157,12,0	1/1:8,0:8:12.04:376,12,0	0/0:1,0:1:3.01:0,3,32	0/0:5,0:5:9.02:0,9,97	0/0:7,0:7:14.99:0,15,146	0/1:9,0:17:99:470,0,105	1/1:6,0:7:20.86:248,21,0	1/1:7,0:7:10.54:153,11,0	1/1:1,1:15:12.04:1040,12,0
chr10	91595092	.	AT	A	301.21	PASS	AB=0.762;AC=5;AF=0.093;AN=54;BaseQRankSum=2.439;DP=191;FS=2.626;HRun=3;HaplotypeScore=52.3740;InbreedingCoeff=-0.1491;MQ=69.39;MQ0=0;MQRankSum=5.680;QD=4.94;ReadPosRankSum=4.207;VQSLOD=0.7153;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:4,7:11:33.46:101,0,33	0/1:2,1:3:12.89:13,0,21	0/0:6,0:4:11.92:0,12,109	0/1:15,0:10:3.47:3,0,124	0/0:6,0:6:15.05:0,15,206	0/0:9,0:9:21.07:0,21,276	0/0:1,0:1:3.01:0,3,43	0/0:28,0:25:72.24:0,72,1023	0/0:3,0:3:6.02:0,6,86	0/0:4,0:4:9.03:0,9,124	0/0:2,0:2:6.01:0,6,67	0/0:2,0:2:6.02:0,6,83	0/0:6,0:6:17.98:0,18,194	0/0:4,0:4:9.01:0,9,95	0/1:3,1:4:6.90:7,0,77	0/0:3,0:3:6.02:0,6,86	0/1:13,15:28:55.83:280,0,56	0/0:12,0:12:29.74:0,30,386	0/0:7,0:7:18.06:0,18,254	0/0:3,0:3:6.01:0,6,66	0/0:4,0:4:10.85:0,11,135	./.	0/0:1,0:1:3.01:0,3,43	0/0:2,0:2:3.01:0,3,38	0/0:10,0:10:11.99:0,12,130	0/0:5,0:5:12.02:0,12,151	0/0:5,0:5:15.05:0,15,201	0/0:5,0:5:12.04:0,12,146
chr10	91595096	.	ATTT	A	830.15	PASS	AB=0.727;AC=4;AF=0.074;AN=54;BaseQRankSum=1.642;DP=188;FS=5.004;HRun=3;HaplotypeScore=58.6203;InbreedingCoeff=-0.0358;MQ=72.10;MQ0=0;MQRankSum=3.240;QD=17.29;ReadPosRankSum=4.164;VQSLOD=0.6501;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:5,7:12:14.61:229,0,15	0/1:3,1:4:19.04:29,0,19	0/0:6,0:4:12.04:0,12,176	0/0:16,0:11:17.57:0,18,172	0/0:5,0:5:15.04:0,15,211	0/0:9,0:9:21.07:0,21,470	0/0:1,0:1:3.01:0,3,52	0/0:28,0:25:75.23:0,75,1351	0/0:4,0:4:9.02:0,9,151	0/0:4,0:4:9.03:0,9,124	0/0:3,0:3:9.02:0,9,110	0/0:1,0:1:2.97:0,3,20	0/0:6,0:6:18.06:0,18,334	0/0:4,0:4:9.03:0,9,148	0/1:4,1:5:23.10:23,0,48	0/0:3,0:3:6.02:0,6,130	0/1:12,15:27:4.02:655,0,4	0/0:15,0:15:42.09:0,42,638	0/0:6,0:6:18.06:0,18,334	0/0:2,0:2:6.02:0,6,84	0/0:4,0:4:10.58:0,11,161	./.	0/0:1,0:1:3.01:0,3,48	0/0:2,0:2:2.92:0,3,17	0/0:6,0:6:12.04:0,12,250	0/0:3,0:3:9.03:0,9,155	0/0:5,0:5:15:0,15,231	0/0:5,0:5:12.04:0,12,267
chr10	91595173	.	AACT	A	2581.01	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.082;DP=307;FS=17.883;HRun=0;HaplotypeScore=52.2717;InbreedingCoeff=0.8789;MQ=66.08;MQ0=0;MQRankSum=-1.084;QD=36.87;ReadPosRankSum=1.209;VQSLOD=2.1651;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:48.16:784,48,0	1/1:0,11:11:30.06:449,30,0	0/0:3,0:3:3.01:0,3,62	0/0:4,0:4:11.36:0,11,150	0/0:5,0:5:15.05:0,15,334	0/0:14,0:14:42.11:0,42,839	0/0:2,0:2:6.02:0,6,134	0/0:17,0:17:39.13:0,39,831	0/0:5,0:5:15.05:0,15,335	0/0:6,0:6:18.05:0,18,343	0/0:15,0:15:45.15:0,45,1005	0/0:5,0:5:15.05:0,15,335	0/0:10,0:10:30.10:0,30,652	0/0:12,0:12:36.12:0,36,804	1/1:2,7:9:18.06:282,18,0	0/0:8,0:8:24.08:0,24,536	1/1:2,29:31:75.26:1225,75,0	0/0:31,0:31:87.29:0,87,1943	0/0:14,0:14:39.12:0,39,809	0/0:9,0:9:27.09:0,27,603	0/0:13,0:13:39.13:0,39,870	0/0:3,0:3:9.03:0,9,201	0/0:7,0:7:21.07:0,21,460	0/0:5,0:5:15.05:0,15,334	0/0:7,0:7:21.07:0,21,469	0/0:16,0:16:48.14:0,48,1020	0/0:6,0:6:18.06:0,18,402	0/0:20,0:20:57.20:0,57,1266
chr10	91596310	.	ACCAAAGACT	A	4735.67	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.510;DP=705;FS=4.927;HRun=0;HaplotypeScore=186.0856;InbreedingCoeff=0.9611;MQ=86.82;MQ0=0;MQRankSum=-11.928;QD=46.89;ReadPosRankSum=2.381;VQSLOD=4.4920;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,27:37:39.13:1134,39,0	1/1:3,9:12:21.07:643,21,0	0/0:23,0:23:62.02:0,62,2611	0/0:29,0:29:84.27:0,84,3655	0/0:30,0:30:84.29:0,84,4028	0/0:31,0:31:90.31:0,90,4310	0/0:16,0:16:48.16:0,48,2318	0/0:40,0:40:99:0,111,4753	0/0:33,1:34:4.44:0,4,4031	0/0:25,0:25:75.26:0,75,3625	0/0:13,0:13:39.12:0,39,1724	0/0:20,0:20:54.19:0,54,2404	0/0:19,0:19:51.16:0,51,2221	0/0:26,0:26:78.27:0,78,3687	1/1:2,26:28:69.19:2040,69,0	0/0:30,0:30:84.29:0,84,4071	1/1:6,18:24:30.10:919,30,0	0/0:18,0:18:54.19:0,54,2501	0/0:16,0:16:48.16:0,48,2046	0/0:32,0:32:96.33:0,96,4283	0/0:29,0:29:84.29:0,84,4053	0/0:25,0:25:72.23:0,72,3125	0/0:12,0:12:36.12:0,36,1673	0/0:26,0:26:75.26:0,75,3535	0/0:34,0:34:99:0,99,4643	0/0:27,0:27:81.27:0,81,3683	0/0:36,0:36:99:0,108,4694	0/0:13,0:13:33.11:0,33,1417
chr10	91596673	.	G	GACACACACAC	9433.45	PASS	AB=1.000;AC=51;AF=0.944;AN=54;BaseQRankSum=-2.040;DP=584;FS=3.013;HRun=0;HaplotypeScore=199.7910;InbreedingCoeff=0.1422;MQ=62.71;MQ0=9;MQRankSum=0.941;QD=17.15;ReadPosRankSum=-1.369;VQSLOD=4.0659;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:30:8.97:116,9,0	1/1:5,0:7:2.68:11,3,0	./.	0/1:33,0:25:0:0,0,0	1/1:22,0:22:5.66:92,6,0	1/1:31,0:31:17.72:491,18,0	0/1:17,0:17:7.35:55,0,7	1/1:33,0:33:36.88:686,37,0	1/1:15,0:15:9.03:293,9,0	1/1:17,0:17:24.07:456,24,0	0/1:16,0:15:0.14:206,0,0	1/1:10,4:14:6.02:279,6,0	1/1:16,0:16:15.05:407,15,0	1/1:22,0:22:24.08:623,24,0	1/1:13,0:15:21.03:335,21,0	1/1:20,0:20:15.05:426,15,0	1/1:10,0:22:14.42:200,14,0	1/1:15,0:18:9.03:384,9,0	1/1:13,0:13:15.03:435,15,0	1/1:20,0:27:0.90:1,1,0	1/1:22,0:20:24.07:606,24,0	1/1:13,7:21:2.99:125,3,0	1/1:13,0:13:15.05:277,15,0	1/1:25,0:24:6.02:224,6,0	1/1:13,5:23:3.01:148,3,0	1/1:25,0:25:54.16:1478,54,0	1/1:20,0:20:33.11:811,33,0	1/1:9,0:9:6.02:267,6,0
chr10	91596686	.	A	ACACACA	4770.06	PASS	AB=1.000;AC=53;AF=0.981;AN=54;BaseQRankSum=-2.740;DP=603;FS=0.000;HRun=0;HaplotypeScore=153.3294;InbreedingCoeff=0.0991;MQ=49.88;MQ0=12;MQRankSum=1.282;QD=8.34;ReadPosRankSum=-0.323;VQSLOD=3.7924;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,7:32:12.13:154,12,0	1/1:6,0:6:3.01:38,3,0	./.	0/1:34,0:20:0:1,0,0	1/1:26,0:26:5.71:92,6,0	1/1:29,0:29:9.03:192,9,0	1/1:16,0:16:3.01:60,3,0	1/1:32,0:31:17.47:166,17,0	1/1:19,0:19:2.08:65,2,0	1/1:21,0:21:20.54:355,21,0	1/1:17,0:16:11.99:219,12,0	1/1:14,0:14:3.01:78,3,0	1/1:20,0:19:6.02:137,6,0	1/1:20,0:20:21.07:470,21,0	1/1:14,0:14:21.03:375,21,0	1/1:20,0:20:9.03:178,9,0	1/1:23,0:23:6.02:77,6,0	1/1:17,0:16:6.02:152,6,0	1/1:11,0:11:10.57:152,11,0	1/1:26,0:26:0.88:1,1,0	1/1:29,0:26:24.54:499,25,0	1/1:23,0:22:2.99:66,3,0	1/1:15,0:15:15.05:277,15,0	1/1:26,0:25:2.99:66,3,0	1/1:21,0:21:3.01:78,3,0	1/1:29,0:29:36.09:539,36,0	1/1:20,0:20:13.60:207,14,0	1/1:9,0:9:1.50:75,2,0
chr10	91597143	.	A	AC	3096.58	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.425;DP=641;FS=6.563;HRun=0;HaplotypeScore=71.4379;InbreedingCoeff=0.9927;MQ=76.76;MQ0=0;MQRankSum=-4.709;QD=39.20;ReadPosRankSum=1.254;VQSLOD=4.1572;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:72.24:1043,72,0	1/1:1,13:14:37.33:561,37,0	0/0:23,0:23:66.14:0,66,865	0/0:6,0:6:17.09:0,17,210	0/0:38,0:38:99:0,114,1562	0/0:34,0:34:99:0,102,1426	0/0:15,0:15:45.13:0,45,596	0/0:32,0:32:93.28:0,93,1253	0/0:17,0:17:51.16:0,51,695	0/0:28,0:28:81.25:0,81,1092	0/0:33,0:33:99:0,99,1321	0/0:22,0:22:63.21:0,63,878	0/0:22,0:22:66.22:0,66,921	0/0:20,0:20:57.18:0,57,781	1/1:0,19:19:57.19:821,57,0	0/0:24,0:24:72.21:0,72,973	1/1:0,21:21:57.19:832,57,0	0/0:24,0:24:66.18:0,66,870	0/0:25,0:25:75.22:0,75,1014	0/0:25,0:25:72.18:0,72,964	0/0:12,0:12:36.12:0,36,503	0/0:34,0:34:96.31:0,96,1327	0/0:23,0:23:69.23:0,69,965	0/0:5,0:5:15.04:0,15,195	0/0:22,0:22:66.21:0,66,908	0/0:37,0:37:99:0,105,1422	0/0:30,0:30:90.12:0,90,1213	0/0:11,0:11:33.11:0,33,461
chr10	91597841	.	T	TA	4676.65	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-14.580;DP=638;FS=3.455;HRun=1;HaplotypeScore=90.1077;InbreedingCoeff=0.9955;MQ=87.01;MQ0=0;MQRankSum=-3.348;QD=42.91;ReadPosRankSum=2.484;VQSLOD=4.9635;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:40:99:1799,120,0	1/1:0,13:13:36.12:540,36,0	0/0:27,0:27:78.21:0,78,971	0/0:18,0:18:51.15:0,51,630	0/0:22,0:22:66.17:0,66,825	0/0:17,0:17:51.15:0,51,648	0/0:25,0:25:72.20:0,72,906	0/0:25,0:25:72.22:0,72,912	0/0:13,0:13:39.13:0,39,506	0/0:31,0:30:93.30:0,93,1208	0/0:21,0:21:63.20:0,63,818	0/0:19,0:19:54.18:0,54,701	0/0:18,0:18:54.18:0,54,699	0/0:30,0:30:90.29:0,90,1168	1/1:1,37:38:99:1574,105,0	0/0:22,0:22:66.20:0,66,843	1/1:0,18:18:51.17:764,51,0	0/0:15,0:15:45.15:0,45,584	0/0:27,0:27:69.20:0,69,859	0/0:27,0:27:75.24:0,75,974	0/0:36,0:36:99:0,102,1306	0/0:17,0:17:48.16:0,48,622	0/0:17,0:17:51.14:0,51,633	0/0:18,0:18:54.13:0,54,682	0/0:31,0:31:90.29:0,90,1169	0/0:23,0:23:66.21:0,66,857	0/0:25,0:25:69.19:0,69,865	0/0:5,0:5:15.05:0,15,195
chr10	91600227	.	CT	C	1281.35	PASS	AB=0.909;AC=11;AF=0.196;AN=56;BaseQRankSum=10.476;DP=473;FS=1.101;HRun=11;HaplotypeScore=79.7429;InbreedingCoeff=0.6500;MQ=74.08;MQ0=4;MQRankSum=-0.829;QD=10.86;ReadPosRankSum=2.408;VQSLOD=3.3722;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,16:20:38.68:307,39,0	1/1:5,7:12:17.96:147,18,0	0/0:15,0:11:7.89:0,8,106	0/0:16,0:12:9.25:0,9,63	0/0:25,0:25:63.11:0,63,646	0/0:18,0:18:51.09:0,51,531	0/0:12,0:12:32.92:0,33,320	0/0:40,0:39:79.68:0,80,786	0/0:14,0:14:33.07:0,33,343	0/0:24,0:24:63.14:0,63,656	0/0:8,0:8:18.05:0,18,192	0/0:5,0:5:15.04:0,15,160	0/0:11,0:11:21.92:0,22,218	0/0:13,0:13:32.99:0,33,330	1/1:1,13:14:38.95:319,39,0	0/0:15,0:15:32.81:0,33,324	1/1:4,29:33:80.74:653,81,0	0/0:18,0:18:47.67:0,48,477	0/0:25,0:24:57.11:0,57,586	0/0:12,0:12:33.08:0,33,352	0/1:10,1:11:6.56:7,0,133	0/0:7,0:7:9.02:0,9,96	0/1:9,1:10:6.67:7,0,128	0/0:3,0:3:6.02:0,6,63	0/0:20,0:20:51.10:0,51,527	0/0:27,0:27:68.93:0,69,678	0/0:24,1:24:68.67:0,69,677	0/1:16,2:17:7.19:7,0,334
chr10	91600594	.	CT	C	666.26	PASS	AB=0.929;AC=11;AF=0.196;AN=56;BaseQRankSum=5.491;DP=414;FS=3.267;HRun=13;HaplotypeScore=48.7261;InbreedingCoeff=0.4911;MQ=70.08;MQ0=5;MQRankSum=-0.219;QD=5.79;ReadPosRankSum=2.597;VQSLOD=1.8176;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,19:25:23.57:327,24,0	1/1:2,8:10:17.89:131,18,0	0/1:25,1:12:12.65:25,0,13	0/1:19,0:14:11.42:11,0,114	0/0:19,2:21:7.27:0,7,393	0/0:25,3:28:19.08:0,19,491	0/0:9,0:10:20.80:0,21,174	0/0:39,4:44:13.62:0,14,685	0/0:6,0:6:15.01:0,15,140	0/0:15,0:15:29.38:0,29,246	0/0:12,1:13:1.16:0,1,155	0/0:5,0:5:15.01:0,15,141	0/0:10,0:10:21.33:0,21,182	0/0:7,0:9:20.87:0,21,189	1/1:4,2:6:11.89:84,12,0	0/0:9,0:9:15.02:0,15,146	1/1:5,10:15:6.54:206,7,0	0/0:7,0:7:12.02:0,12,117	0/0:22,0:23:56.47:0,56,522	0/0:14,0:14:30.05:0,30,292	0/1:10,2:12:41.68:42,0,113	0/0:5,0:5:9.01:0,9,87	0/0:2,0:4:8.67:0,9,53	0/0:3,0:3:3:0,3,29	0/0:14,0:15:26.22:0,26,286	0/0:25,0:25:62.28:0,62,575	0/0:17,0:17:41.99:0,42,388	0/0:14,2:16:1.43:0,1,335
chr10	91601076	.	G	GAAA	2217.79	PASS	AB=0.926;AC=10;AF=0.179;AN=56;BaseQRankSum=-1.673;DP=665;FS=5.025;HRun=10;HaplotypeScore=153.3533;InbreedingCoeff=0.6769;MQ=67.17;MQ0=0;MQRankSum=-4.425;QD=15.84;ReadPosRankSum=-2.535;VQSLOD=0.3416;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,23:39:53.72:820,54,0	1/1:4,3:8:9.02:123,9,0	0/0:19,0:18:0.57:0,1,305	0/1:18,0:17:18.71:19,0,231	0/0:26,0:26:10.65:0,11,329	0/0:17,0:17:29.30:0,29,274	0/0:22,0:22:32.93:0,33,359	0/1:19,0:23:63.58:64,0,200	0/0:29,0:29:43.63:0,44,437	0/0:37,0:37:49.99:0,50,502	0/0:22,0:22:27.78:0,28,306	0/0:23,0:24:27.24:0,27,279	0/0:37,0:37:71.66:0,72,524	0/0:19,0:19:50.25:0,50,359	1/1:5,21:31:48.14:815,48,0	0/0:22,0:22:34.43:0,34,365	1/1:5,12:20:33.08:542,33,0	0/0:13,0:13:32.76:0,33,237	0/0:24,0:24:33.94:0,34,233	0/0:29,0:30:29.91:0,30,410	0/0:28,0:28:9.36:0,9,371	0/0:15,0:15:34.44:0,34,251	0/0:16,0:16:35.07:0,35,242	0/0:38,0:38:75.96:0,76,540	0/0:16,0:17:23.82:0,24,224	0/0:31,0:31:48.54:0,49,437	0/0:25,0:25:47.76:0,48,347	0/0:12,0:13:24.72:0,25,223
chr10	91601331	.	C	CAAAAAAAA	9481.14	PASS	AC=54;AF=0.964;AN=56;BaseQRankSum=-1.767;DP=533;FS=2.579;HRun=18;HaplotypeScore=151.6572;InbreedingCoeff=0.4637;MQ=45.55;MQ0=32;MQRankSum=-0.039;QD=18.09;ReadPosRankSum=0.644;VQSLOD=0.5272;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:20:27.10:275,27,0	1/1:6,0:6:9.03:160,9,0	1/1:9,0:5:1.40:9,1,0	0/0:9,0:5:4.31:0,4,14	1/1:33,0:32:39.89:636,40,0	1/1:15,0:14:12.04:206,12,0	1/1:19,1:19:19.30:369,19,0	1/1:25,0:22:24.55:488,25,0	1/1:16,1:16:21.07:425,21,0	1/1:25,0:23:22.67:267,23,0	1/1:21,0:22:24.53:383,25,0	1/1:12,0:12:15.05:288,15,0	1/1:20,0:19:15.62:234,16,0	1/1:18,0:18:15.05:277,15,0	1/1:24,0:23:17.69:137,18,0	1/1:12,0:10:6.01:80,6,0	1/1:18,0:15:17.99:237,18,0	1/1:16,0:10:9.03:196,9,0	1/1:34,0:31:60.17:1106,60,0	1/1:23,0:22:29.03:366,29,0	1/1:6,0:5:6.02:117,6,0	1/1:18,0:16:18.06:340,18,0	1/1:10,1:13:19.22:466,19,0	1/1:15,0:12:12.84:197,13,0	1/1:20,0:21:27.09:417,27,0	1/1:30,0:32:48.13:860,48,0	1/1:20,1:21:28.33:513,28,0	1/1:22,0:13:19.31:434,19,0
chr10	91602763	.	GT	G	5718.54	PASS	AB=0.648;AC=45;AF=0.804;AN=56;BaseQRankSum=2.232;DP=634;FS=13.843;HRun=13;HaplotypeScore=89.1131;InbreedingCoeff=0.0066;MQ=69.32;MQ0=1;MQRankSum=1.396;QD=9.27;ReadPosRankSum=1.719;VQSLOD=2.5681;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,1:42:43.55:167,44,0	1/1:0,0:7:12.22:35,12,0	0/0:17,0:13:21.21:0,21,170	0/1:15,1:11:13.23:25,0,13	0/1:12,24:36:25.18:321,0,25	0/1:9,15:24:14.68:225,0,15	1/1:5,14:20:18.33:193,18,0	1/1:6,11:18:32.22:221,32,0	0/1:10,12:22:8.50:110,0,9	0/1:6,15:21:7.78:265,0,8	1/1:4,18:23:50.64:372,51,0	0/1:9,18:29:9.52:247,0,10	1/1:7,13:20:26.70:195,27,0	1/1:4,14:20:16.65:267,17,0	1/1:9,1:35:19.52:116,20,0	0/1:10,18:28:11.55:243,0,12	1/1:8,1:26:39.08:127,39,0	1/1:12,3:17:12.42:166,12,0	0/1:9,10:19:22.62:181,0,23	1/1:8,22:30:27.44:365,27,0	1/1:7,16:24:23.55:270,24,0	1/1:2,14:16:38.74:284,39,0	1/1:7,14:21:35.74:262,36,0	1/1:6,17:23:35.73:263,36,0	1/1:2,12:14:17.89:131,18,0	1/1:4,16:22:19.55:289,20,0	0/1:11,21:34:3.68:285,0,4	1/1:0,6:7:13.97:93,14,0
chr10	91603621	.	GA	G	13273.03	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.027;DP=652;FS=24.768;HRun=10;HaplotypeScore=69.1032;InbreedingCoeff=0.7978;MQ=74.40;MQ0=0;MQRankSum=-3.918;QD=21.48;ReadPosRankSum=3.847;VQSLOD=3.8250;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,37:41:92.98:807,93,0	1/1:1,4:5:5.67:52,6,0	0/0:14,0:13:0.47:0,0,139	0/0:19,1:19:23.13:0,23,207	1/1:1,30:31:89.96:777,90,0	1/1:1,22:23:56.99:495,57,0	1/1:2,20:22:47.98:417,48,0	1/1:3,21:24:62.97:543,63,0	1/1:3,15:18:41.98:365,42,0	1/1:1,27:28:82.96:696,83,0	1/1:4,20:24:56.97:494,57,0	1/1:2,20:22:50.78:442,51,0	1/1:4,26:30:74.98:651,75,0	1/1:0,24:24:56.99:495,57,0	1/1:4,16:20:44.98:391,45,0	1/1:0,32:32:83.98:729,84,0	1/1:3,31:34:77.98:677,78,0	1/1:2,9:11:20.99:182,21,0	1/1:1,18:19:53.95:462,54,0	1/1:0,29:29:86.98:755,87,0	1/1:1,12:13:23.99:208,24,0	1/1:0,15:15:41.99:364,42,0	1/1:1,23:24:59.99:521,60,0	1/1:1,22:23:53.99:469,54,0	1/1:0,37:37:92.98:807,93,0	1/1:3,20:23:29.78:483,30,0	1/1:3,34:37:89.98:782,90,0	1/1:0,9:9:24:208,24,0
chr10	91604854	.	ATTCTGGGGACTT	A	3878.30	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.477;DP=570;FS=5.337;HRun=0;HaplotypeScore=187.1889;InbreedingCoeff=0.9888;MQ=69.88;MQ0=1;MQRankSum=-9.694;QD=50.37;ReadPosRankSum=2.677;VQSLOD=3.2726;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,23:32:39.13:1428,39,0	1/1:1,6:7:18.06:677,18,0	0/0:32,0:29:75.25:0,75,3631	0/0:16,0:16:42.14:0,42,1855	0/0:19,0:19:54.19:0,54,3087	0/0:23,0:23:66.21:0,66,3724	0/0:19,0:19:57.20:0,57,3364	0/0:38,0:38:99:0,102,5196	0/0:16,0:16:42.14:0,42,2568	0/0:26,0:26:78.24:0,78,3962	0/0:15,0:15:45.14:0,45,2324	0/0:12,0:12:36.11:0,36,1879	0/0:24,0:24:69.24:0,69,4134	0/0:18,0:18:54.19:0,54,3325	1/1:5,20:25:36.12:1335,36,0	0/0:16,0:16:45.15:0,45,2293	1/1:3,10:12:12.04:438,12,0	0/0:16,0:16:42.14:0,42,2521	0/0:19,0:19:57.20:0,57,3296	0/0:23,0:23:63.20:0,63,3512	0/0:25,0:25:75.24:0,75,4270	0/0:23,0:23:66.23:0,66,3966	0/0:12,0:12:33.11:0,33,1880	0/0:17,0:17:48.16:0,48,2864	0/0:16,0:16:48.16:0,48,2897	0/0:37,0:37:99:0,105,5616	0/0:19,0:19:57.20:0,57,3512	0/0:12,0:12:36.12:0,36,1795
chr10	91605771	.	CTT	C	2303.14	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-10.202;DP=667;FS=0.908;HRun=12;HaplotypeScore=115.9314;InbreedingCoeff=0.9377;MQ=72.85;MQ0=1;MQRankSum=-1.510;QD=22.80;ReadPosRankSum=7.249;VQSLOD=2.7687;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,41:43:99:1160,114,0	1/1:1,9:10:27.05:275,27,0	0/0:23,0:23:28.49:0,28,430	0/0:14,0:14:1.30:0,1,170	0/0:8,0:44:99:0,108,1034	0/0:8,0:25:44.52:0,45,396	0/0:4,0:20:42.07:0,42,415	0/0:13,0:33:59.99:0,60,573	0/0:3,0:18:27.05:0,27,280	0/0:10,0:23:47.66:0,48,448	0/0:5,1:21:23.52:0,24,451	0/0:9,0:29:48:0,48,471	0/0:3,0:18:30.01:0,30,293	0/0:5,0:17:36.05:0,36,355	1/1:3,22:25:47.81:540,48,0	0/0:9,0:25:39.03:0,39,363	1/1:3,19:22:48.06:488,48,0	0/0:2,0:10:26.95:0,27,239	0/0:7,0:37:96:0,96,908	0/0:9,0:24:56.99:0,57,567	0/0:4,0:16:22.28:0,22,203	0/0:5,0:22:59.88:0,60,586	0/0:8,0:24:42.14:0,42,400	0/0:10,0:29:60.57:0,61,635	0/0:4,0:19:39.05:0,39,380	0/0:8,0:29:71.28:0,71,690	0/0:2,0:30:60.03:0,60,556	0/0:3,0:13:30.06:0,30,316
chr10	91606058	.	C	CAAA	4032.41	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-3.796;DP=570;FS=0.000;HRun=0;HaplotypeScore=92.8436;InbreedingCoeff=0.9989;MQ=83.21;MQ0=0;MQRankSum=-4.667;QD=65.04;ReadPosRankSum=-0.866;VQSLOD=4.7322;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:20:51.13:1138,51,0	1/1:4,4:8:24.08:536,24,0	0/0:16,0:16:38.67:0,39,749	0/0:19,0:19:44.76:0,45,736	0/0:33,0:33:99:0,99,1815	0/0:29,0:29:87.30:0,87,1622	0/0:23,0:23:66.23:0,66,1224	0/0:29,0:29:87.27:0,87,1494	0/0:17,0:17:51.17:0,51,951	0/0:29,0:29:87.30:0,87,1612	0/0:20,0:20:57.20:0,57,1063	0/0:16,0:16:48.15:0,48,864	0/0:19,0:19:57.20:0,57,1051	0/0:13,0:13:39.13:0,39,727	1/1:2,18:20:60.21:1457,60,0	0/0:17,0:17:51.16:0,51,915	1/1:6,8:14:42.12:902,42,0	0/0:11,0:11:30.10:0,30,531	0/0:19,0:19:57.20:0,57,1060	0/0:29,0:29:87.27:0,87,1537	0/0:28,0:28:84.29:0,84,1559	0/0:13,0:13:36.12:0,36,671	0/0:22,0:22:63.22:0,63,1160	0/0:16,0:16:48.16:0,48,895	0/0:29,0:29:81.27:0,81,1474	0/0:26,0:26:78.26:0,78,1422	0/0:26,0:26:78.25:0,78,1422	0/0:9,0:9:27.09:0,27,483
chr10	91606103	.	T	TTC	2637.95	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-5.639;DP=627;FS=2.937;HRun=0;HaplotypeScore=117.2478;InbreedingCoeff=0.8667;MQ=78.48;MQ0=0;MQRankSum=-2.309;QD=21.98;ReadPosRankSum=-1.358;VQSLOD=3.5445;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,15:22:48.15:740,48,0	1/1:2,7:9:24.04:360,24,0	0/0:28,0:26:40.56:0,41,416	0/1:42,0:34:34.80:35,0,166	0/0:27,0:27:57.18:0,57,695	0/0:26,0:26:57.18:0,57,696	0/0:24,0:24:36.28:0,36,672	0/0:28,0:28:57.16:0,57,674	0/0:19,0:19:42.11:0,42,490	0/0:26,0:26:48.14:0,48,575	0/0:18,0:18:42.12:0,42,504	0/0:17,0:17:45.14:0,45,550	0/0:20,0:20:42.12:0,42,502	0/0:15,0:15:42.10:0,42,482	1/1:8,18:26:35.42:851,35,0	0/0:22,0:22:60.18:0,60,723	1/1:1,20:21:51.17:818,51,0	0/0:16,0:16:39.99:0,40,462	0/0:23,0:25:56.78:0,57,623	0/0:21,0:22:56.98:0,57,644	0/0:22,0:22:45.14:0,45,549	0/0:16,0:16:39.12:0,39,476	0/0:22,0:22:54.14:0,54,637	0/0:25,0:25:37.22:0,37,640	0/0:22,0:22:28.32:0,28,597	0/0:23,0:23:60.17:0,60,711	0/0:28,0:28:63.17:0,63,755	0/0:14,0:14:39.12:0,39,476
chr10	91608654	.	T	TA	9480.97	PASS	AB=0.574;AC=50;AF=0.893;AN=56;BaseQRankSum=-5.763;DP=538;FS=4.567;HRun=11;HaplotypeScore=60.2748;InbreedingCoeff=0.4811;MQ=68.97;MQ0=3;MQRankSum=-2.000;QD=18.92;ReadPosRankSum=3.179;VQSLOD=6.0838;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,4:26:37.26:218,37,0	1/1:2,1:4:5.85:45,6,0	0/0:19,1:9:13.53:0,14,73	0/0:15,0:14:3.08:0,3,67	1/1:4,17:24:41:485,41,0	1/1:2,21:23:63.13:640,63,0	0/1:1,7:8:10.90:79,0,11	1/1:8,27:37:69.38:746,69,0	1/1:2,9:12:17.93:168,18,0	1/1:12,14:26:39.08:396,39,0	1/1:7,20:28:47.52:451,48,0	1/1:1,14:15:39.08:396,39,0	1/1:1,13:14:33.07:335,33,0	1/1:2,15:17:42.08:426,42,0	1/1:3,0:16:28.36:141,28,0	1/1:2,14:17:38.91:380,39,0	1/1:1,0:28:68.18:342,68,0	1/1:4,22:26:51.21:597,51,0	1/1:5,16:21:53.90:515,54,0	1/1:7,18:26:30.74:479,31,0	1/1:2,10:12:3.85:210,4,0	1/1:2,7:9:21.04:213,21,0	0/1:6,10:16:16.36:213,0,16	1/1:2,11:13:30.06:305,30,0	1/1:0,16:17:44.92:439,45,0	1/1:2,19:21:54.08:534,54,0	1/1:5,23:28:27.83:453,28,0	1/1:4,11:15:27.05:274,27,0
chr10	91610462	.	C	CAT	31030.98	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-13.651;DP=724;FS=10.882;HRun=0;HaplotypeScore=70.9405;InbreedingCoeff=0.9785;MQ=82.01;MQ0=0;MQRankSum=-4.872;QD=51.55;ReadPosRankSum=1.259;VQSLOD=4.7614;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.25:0,75,1148	0/0:2,0:2:6.02:0,6,92	0/0:19,0:19:51.17:0,51,777	0/0:19,0:19:54.18:0,54,810	1/1:2,34:36:96.33:1854,96,0	1/1:0,26:26:72.25:1391,72,0	1/1:1,17:18:45.15:869,45,0	1/1:2,24:26:78.25:1472,78,0	1/1:0,35:35:99:1970,102,0	1/1:0,36:38:99:2181,114,0	1/1:1,40:42:99:2224,120,0	1/1:2,22:25:57.20:1100,57,0	1/1:0,31:31:81.28:1563,81,0	1/1:1,25:26:66.23:1274,66,0	0/0:39,0:39:99:0,114,1721	1/1:2,34:36:93.32:1797,93,0	0/0:17,0:17:47.84:0,48,734	1/1:2,14:17:45.15:848,45,0	1/1:0,19:19:57.19:1067,57,0	1/1:2,28:30:84.29:1600,84,0	1/1:2,24:26:66.23:1275,66,0	1/1:2,26:28:66.23:1275,66,0	1/1:5,29:35:87.30:1656,87,0	1/1:0,20:20:54.19:1043,54,0	1/1:1,19:22:57.20:1101,57,0	1/1:0,24:24:72.24:1325,72,0	1/1:2,28:30:75.26:1448,75,0	1/1:0,12:12:36.12:695,36,0
chr10	91610656	.	CG	C	2862.40	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-13.883;DP=639;FS=1.425;HRun=4;HaplotypeScore=106.8423;InbreedingCoeff=0.9813;MQ=86.72;MQ0=0;MQRankSum=-5.079;QD=31.80;ReadPosRankSum=0.783;VQSLOD=3.3582;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:72.22:864,72,0	1/1:0,12:12:33.10:396,33,0	0/0:18,0:18:48.14:0,48,631	0/0:24,0:24:67.35:0,67,837	0/0:27,0:27:71.67:0,72,559	0/0:24,0:24:68.63:0,69,519	0/0:21,0:21:56.68:0,57,434	0/0:29,0:29:79.84:0,80,526	0/0:17,1:18:17.77:0,18,347	0/0:26,0:26:67.49:0,67,428	0/0:21,0:21:62.77:0,63,485	0/0:23,0:23:68.73:0,69,534	0/0:24,0:24:71.69:0,72,545	0/0:20,0:20:56.75:0,57,430	1/1:0,33:33:96.29:1152,96,0	0/0:30,0:30:86.55:0,87,664	1/1:0,19:19:51.16:612,51,0	0/0:14,0:14:38.92:0,39,324	0/0:19,0:19:47.29:0,47,314	0/0:30,0:30:80.57:0,81,610	0/0:22,0:22:59.70:0,60,459	0/0:21,0:21:62.72:0,63,474	0/0:27,0:27:77.68:0,78,614	0/0:14,0:14:38.84:0,39,298	0/0:24,0:24:59.70:0,60,446	0/0:34,0:34:99:0,101,675	0/0:35,0:35:99:0,102,796	0/0:4,0:4:8.97:0,9,73
chr10	91611358	.	T	TG	1945.58	PASS	AB=0.714;AC=41;AF=0.732;AN=56;BaseQRankSum=-2.655;DP=403;FS=9.446;HRun=11;HaplotypeScore=80.9227;InbreedingCoeff=0.4096;MQ=77.28;MQ0=1;MQRankSum=-0.040;QD=6.20;ReadPosRankSum=-1.645;VQSLOD=1.1341;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:24:26.59:0,27,192	0/0:7,0:7:11.91:0,12,93	0/0:16,0:15:4.09:0,4,27	0/1:14,1:14:7.26:7,0,63	1/1:9,7:16:15.01:146,15,0	1/1:10,12:22:13.73:150,14,0	0/1:5,10:15:2.06:134,0,2	0/1:12,8:20:11.28:60,0,11	1/1:4,10:14:18.02:176,18,0	1/1:8,1:9:3:30,3,0	1/1:8,4:12:6.01:61,6,0	1/1:8,4:12:11.85:110,12,0	1/1:4,6:10:9.02:91,9,0	1/1:3,6:9:9.01:86,9,0	0/0:22,0:22:41.76:0,42,320	1/1:11,8:19:12.02:122,12,0	0/0:20,0:20:50.75:0,51,391	0/1:3,3:6:14.28:39,0,14	0/1:6,7:13:5.24:115,0,5	1/1:7,7:14:12.02:121,12,0	1/1:20,3:23:8.97:75,9,0	1/1:5,0:11:5.84:39,6,0	1/1:7,3:10:5.72:61,6,0	1/1:6,8:14:9.02:91,9,0	1/1:8,3:11:6.01:61,6,0	1/1:12,2:14:3.01:30,3,0	1/1:10,12:23:23.22:268,23,0	1/1:2,0:2:5.95:43,6,0
chr10	91616849	.	AAC	A	1765.64	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.171;DP=713;FS=1.202;HRun=0;HaplotypeScore=82.0893;InbreedingCoeff=0.9965;MQ=73.18;MQ0=1;MQRankSum=0.679;QD=34.62;ReadPosRankSum=-0.268;VQSLOD=5.4899;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,2597	0/0:8,0:8:21.07:0,21,366	0/0:30,0:29:79.40:0,79,1325	0/0:26,0:23:60.22:0,60,887	1/1:0,26:26:72.15:1025,72,0	0/0:38,0:38:99:0,114,2086	0/0:27,0:27:81.27:0,81,1397	0/0:21,0:21:60.19:0,60,993	1/1:0,25:25:57.19:862,57,0	0/0:29,0:29:87.30:0,87,1586	0/0:27,0:27:81.24:0,81,1391	0/0:22,0:22:66.21:0,66,1142	0/0:27,0:27:81.26:0,81,1335	0/0:26,0:26:72.16:0,72,1262	0/0:30,0:30:90.27:0,90,1604	0/0:26,1:27:32.89:0,33,1294	0/0:34,0:34:96.29:0,96,1724	0/0:11,0:11:33.11:0,33,562	0/0:25,0:25:72.24:0,72,1338	0/0:21,0:21:63.21:0,63,1123	0/0:27,0:27:81.28:0,81,1493	0/0:20,0:20:60.20:0,60,1083	0/0:11,0:11:33.09:0,33,582	0/0:42,0:42:99:0,123,2163	0/0:23,0:23:66.20:0,66,1126	0/0:20,0:20:57.18:0,57,1031	0/0:33,0:33:99:0,99,1793	0/0:8,0:8:24.08:0,24,444
chr10	91618233	.	TC	T	2460.73	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.026;DP=562;FS=4.203;HRun=2;HaplotypeScore=57.0238;InbreedingCoeff=0.9466;MQ=64.08;MQ0=5;MQRankSum=0.129;QD=29.29;ReadPosRankSum=2.836;VQSLOD=3.2806;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,38:40:99:1220,99,0	1/1:0,4:4:2.94:39,3,0	0/0:15,0:9:24.62:0,25,276	0/0:14,0:10:19.11:0,19,246	0/0:15,0:15:42.04:0,42,550	0/0:14,0:14:42.14:0,42,594	0/0:18,0:18:48.12:0,48,655	0/0:21,0:21:60.08:0,60,717	0/0:27,0:27:77.69:0,78,957	0/0:27,0:26:75.20:0,75,996	0/0:23,0:23:68.54:0,69,868	0/0:21,0:21:58.14:0,58,825	0/0:30,0:30:87.24:0,87,1173	0/0:19,0:19:57.14:0,57,735	1/1:0,14:14:39.13:503,39,0	0/0:27,0:27:72.02:0,72,982	1/1:1,25:26:66.21:851,66,0	0/0:18,0:17:32.05:0,32,569	0/0:20,0:19:57.14:0,57,727	0/0:20,0:20:60.08:0,60,753	0/0:25,0:25:72.19:0,72,949	0/0:12,0:12:32.24:0,32,341	0/0:16,0:16:47.27:0,47,598	0/0:20,0:20:60.11:0,60,742	0/0:20,0:20:60.13:0,60,760	0/0:19,0:19:57.10:0,57,692	0/0:24,0:24:72.22:0,72,997	0/0:13,0:13:39.11:0,39,531
chr10	91618418	.	TACTC	T	8417.91	PASS	AB=0.640;AC=37;AF=0.661;AN=56;BaseQRankSum=10.231;DP=481;FS=23.180;HRun=0;HaplotypeScore=68.7073;InbreedingCoeff=0.8549;MQ=67.89;MQ0=1;MQRankSum=1.353;QD=24.12;ReadPosRankSum=1.645;VQSLOD=2.8986;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:33:48.16:805,48,0	1/1:2,8:10:18.06:302,18,0	0/0:16,0:14:14.62:0,15,203	0/0:12,0:9:6.02:0,6,130	1/1:6,14:20:45.08:658,45,0	1/1:2,16:18:18.06:302,18,0	1/1:3,11:14:9.03:151,9,0	1/1:16,19:36:57.13:830,57,0	1/1:3,13:16:18.06:302,18,0	0/0:23,0:23:48.14:0,48,1021	0/0:20,0:20:57.20:0,57,1306	1/1:3,10:13:24.08:403,24,0	0/0:15,0:15:36.08:0,36,656	1/1:1,9:10:21.07:351,21,0	1/1:1,4:5:3.01:50,3,0	1/1:4,13:17:21.07:352,21,0	1/1:3,26:29:39.13:654,39,0	1/1:3,19:22:36.12:604,36,0	1/1:7,13:20:39.12:601,39,0	1/1:5,15:20:42.11:651,42,0	1/1:0,14:14:12.04:201,12,0	0/0:7,0:7:21.07:0,21,445	0/0:13,0:13:36.11:0,36,707	0/0:6,0:6:18.06:0,18,391	0/0:20,0:20:45.14:0,45,944	0/1:7,9:16:99:393,0,169	1/1:1,16:17:21.07:352,21,0	1/1:5,14:19:27.09:453,27,0
chr10	91619178	.	CGCGT	C	1092.07	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.359;DP=544;FS=0.516;HRun=0;HaplotypeScore=104.6655;InbreedingCoeff=0.9282;MQ=67.06;MQ0=0;MQRankSum=-2.865;QD=13.00;ReadPosRankSum=4.832;VQSLOD=2.8333;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,1:26:61.50:421,61,0	1/1:12,2:14:32.50:305,32,0	0/0:12,0:11:6.92:0,7,131	0/0:3,0:2:2.94:0,3,18	0/0:32,0:32:90.25:0,90,2070	0/0:18,0:18:48.13:0,48,1164	0/0:22,0:22:63.15:0,63,1385	0/0:18,0:18:33.05:0,33,461	0/0:15,0:15:39.13:0,39,989	0/0:30,0:30:90.28:0,90,2210	0/0:30,0:30:90.23:0,90,2081	0/0:18,0:18:54.14:0,54,1199	0/0:18,0:18:48.12:0,48,1037	0/0:14,0:14:42.14:0,42,1079	1/1:19,0:19:34.70:209,35,0	0/0:19,0:19:51.13:0,51,1186	1/1:24,1:25:44.20:317,44,0	0/0:13,0:13:39.11:0,39,905	0/0:22,0:22:63.11:0,63,1108	0/0:17,0:17:45.15:0,45,1121	0/0:24,0:24:72.14:0,72,1504	0/0:12,0:12:36.11:0,36,811	0/0:22,0:22:60.16:0,60,1428	0/0:6,0:6:18.03:0,18,335	0/0:20,0:19:57.16:0,57,1377	0/0:29,0:29:75.23:0,75,1806	0/0:27,0:27:81.22:0,81,1862	0/0:19,0:19:57.16:0,57,1335
chr10	91619180	.	CGT	C	2354.65	PASS	AB=0.923;AC=9;AF=0.161;AN=56;BaseQRankSum=12.227;DP=539;FS=0.000;HRun=0;HaplotypeScore=78.0757;InbreedingCoeff=0.8751;MQ=66.31;MQ0=0;MQRankSum=-1.513;QD=24.79;ReadPosRankSum=5.080;VQSLOD=4.2318;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:63.17:916,63,0	1/1:2,12:14:32.77:408,33,0	0/1:11,1:11:1.70:2,0,124	0/0:2,0:1:2.94:0,3,18	0/0:32,0:32:90.23:0,90,1475	0/0:17,0:17:48.13:0,48,845	0/0:23,0:23:66.12:0,66,1027	0/0:15,0:15:33.05:0,33,390	0/0:15,0:15:39.13:0,39,710	0/0:31,0:31:93.28:0,93,1615	0/0:30,0:30:90.22:0,90,1486	0/0:18,0:18:54.13:0,54,871	0/0:17,0:17:48.12:0,48,750	0/0:14,0:14:42.13:0,42,773	1/1:2,17:19:36.12:524,36,0	0/0:19,0:19:54.13:0,54,890	1/1:1,23:24:45.15:665,45,0	0/0:13,0:13:39.09:0,39,638	0/0:22,0:22:66.08:0,66,856	0/0:19,0:19:51.12:0,51,819	0/0:24,0:24:72.14:0,72,1109	0/0:12,0:12:36.08:0,36,559	0/0:21,0:21:60.16:0,60,1012	0/0:7,0:7:20.99:0,21,267	0/0:20,0:19:57.14:0,57,987	0/0:27,0:27:75.21:0,75,1286	0/0:27,0:27:81.18:0,81,1329	0/0:19,0:19:57.16:0,57,954
chr10	91619282	.	AAACCAACCAACC	A	5119.11	PASS	AB=0.766;AC=33;AF=0.688;AN=48;BaseQRankSum=-2.347;DP=480;FS=3.969;HRun=0;HaplotypeScore=158.5754;InbreedingCoeff=0.4042;MQ=65.06;MQ0=3;MQRankSum=-0.382;QD=15.61;ReadPosRankSum=-0.056;VQSLOD=3.9427;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,8:29:12.04:331,12,0	./.	./.	./.	1/1:13,10:23:5.98:57,6,0	1/1:15,13:28:21.07:591,21,0	1/1:11,0:11:3.01:102,3,0	0/0:22,0:20:0:0,0,0	1/1:7,7:14:12.04:341,12,0	0/0:17,0:23:10.94:0,11,175	0/0:7,0:8:2.80:0,3,13	1/1:12,2:14:3.01:102,3,0	0/1:5,0:12:3.55:4,0,16	1/1:7,13:20:18.06:564,18,0	1/1:12,9:21:21.07:695,21,0	1/1:12,9:21:9.03:305,9,0	0/1:14,0:14:60:60,0,93	1/1:14,6:20:3.01:102,3,0	1/1:18,5:22:14.89:184,15,0	1/1:7,5:12:8.94:77,9,0	1/1:19,0:18:12.04:181,12,0	0/0:11,0:16:8.97:0,9,87	0/0:7,0:10:5.98:0,6,57	0/0:10,0:19:1.34:0,1,22	./.	1/1:15,9:24:26.98:634,27,0	1/1:5,4:9:3.01:102,3,0	0/1:7,7:14:57.36:688,0,57
chr10	91619582	.	G	GATTT	2063.91	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-6.247;DP=408;FS=0.000;HRun=0;HaplotypeScore=63.8410;InbreedingCoeff=0.7757;MQ=64.99;MQ0=0;MQRankSum=-0.313;QD=33.83;ReadPosRankSum=2.916;VQSLOD=3.5870;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,9:15:30.10:695,30,0	1/1:5,5:10:12.04:292,12,0	0/0:4,0:4:8.80:0,9,57	0/0:3,0:4:4.83:0,5,54	0/0:27,0:27:48.16:0,48,784	0/0:19,0:19:30.10:0,30,490	0/0:4,0:4:3.01:0,3,49	0/0:27,0:27:33.10:0,33,513	0/0:8,0:8:12.04:0,12,196	0/0:20,0:20:36.12:0,36,579	0/0:20,0:20:39.13:0,39,637	0/0:8,0:8:12.04:0,12,196	0/0:14,0:14:18.06:0,18,291	0/0:8,0:8:18.06:0,18,294	1/1:6,5:11:12.04:292,12,0	0/0:8,0:8:21.07:0,21,343	1/1:11,13:24:39.13:938,39,0	0/0:21,0:21:45.15:0,45,735	0/0:30,0:30:45.14:0,45,710	0/0:18,0:18:30.09:0,30,468	0/0:6,0:6:12.04:0,12,196	0/0:6,0:6:3.01:0,3,49	0/0:8,0:8:12.03:0,12,174	0/0:4,0:4:3.01:0,3,49	0/0:23,0:23:39.13:0,39,631	0/0:18,0:18:42.13:0,42,663	0/0:9,0:9:18.06:0,18,294	0/0:33,0:33:48.12:0,48,705
chr10	91620442	.	TAAACAAAC	T	19036.86	PASS	AB=0.652;AC=51;AF=0.911;AN=56;BaseQRankSum=5.361;DP=618;FS=0.000;HRun=0;HaplotypeScore=170.0666;InbreedingCoeff=0.6748;MQ=47.98;MQ0=1;MQRankSum=-5.428;QD=33.46;ReadPosRankSum=4.701;VQSLOD=4.4022;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:42.14:860,42,0	1/1:9,0:9:12.04:236,12,0	0/0:23,0:20:27.08:0,27,772	0/0:24,0:21:24.07:0,24,811	1/1:14,22:36:53.90:1038,54,0	1/1:3,17:20:39.13:969,39,0	0/1:14,16:30:12.07:657,0,12	1/1:18,2:20:20.98:279,21,0	1/1:8,12:20:21.07:521,21,0	1/1:8,14:22:42.13:1003,42,0	1/1:4,24:28:54.14:1262,54,0	1/1:6,15:21:36.12:917,36,0	1/1:5,15:20:39.13:991,39,0	1/1:6,8:14:21.07:535,21,0	1/1:17,0:17:24.08:489,24,0	1/1:7,14:21:33.11:840,33,0	1/1:21,0:21:27.09:545,27,0	1/1:11,13:24:0.08:399,0,0	1/1:12,10:22:30.04:567,30,0	1/1:6,17:23:39.06:878,39,0	1/1:14,8:22:15.05:379,15,0	1/1:8,16:24:39.13:965,39,0	1/1:4,15:19:38.90:918,39,0	1/1:10,10:20:10.77:296,11,0	1/1:5,16:21:36.12:891,36,0	1/1:10,16:26:48.11:1046,48,0	1/1:2,17:19:41.96:1021,42,0	1/1:4,9:13:21.07:535,21,0
chr10	91620466	.	CAAACAAACA	C	10268.29	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=16.259;DP=622;FS=15.170;HRun=0;HaplotypeScore=204.0676;InbreedingCoeff=-0.5804;MQ=49.47;MQ0=6;MQRankSum=-12.486;QD=18.21;ReadPosRankSum=15.875;VQSLOD=0.4420;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:11,24:35:45.01:1315,45,0	1/1:1,7:8:21.06:451,21,0	0/0:29,0:18:53.76:0,54,1203	0/0:29,0:17:39.04:0,39,1160	0/1:26,0:26:96.58:480,0,97	0/1:21,0:21:99:406,0,105	0/1:22,0:23:99:292,0,196	0/1:23,0:23:73.45:73,0,484	0/1:17,0:17:99:209,0,159	0/1:22,0:22:99:409,0,190	0/1:34,0:34:99:508,0,380	0/1:23,0:23:99:388,0,251	0/1:22,0:22:99:418,0,214	0/1:14,0:14:99:226,0,123	1/1:4,17:21:24.08:733,24,0	0/1:17,0:17:74.71:370,0,75	1/1:8,22:30:25.33:801,25,0	0/1:24,0:24:99:156,0,339	0/1:19,0:18:99:206,0,191	0/1:26,0:26:99:357,0,398	0/1:14,0:14:99:163,0,128	0/1:19,0:19:99:399,0,141	0/1:21,0:21:99:359,0,137	0/1:20,0:20:99:119,0,240	0/1:20,0:20:72.09:373,0,72	0/1:26,0:26:99:420,0,291	0/1:27,0:26:99:408,0,319	0/1:12,0:12:86.28:229,0,86
chr10	91621534	.	GT	G	2053.61	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.970;DP=737;FS=5.015;HRun=10;HaplotypeScore=76.6383;InbreedingCoeff=0.9200;MQ=62.95;MQ0=13;MQRankSum=0.474;QD=15.44;ReadPosRankSum=6.376;VQSLOD=4.0331;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,51:59:83.94:956,84,0	1/1:3,10:13:29.98:260,30,0	0/0:20,0:11:11.09:0,11,146	0/0:12,0:8:0.12:0,0,124	0/0:34,0:34:92.72:0,93,931	0/0:23,0:23:60.16:0,60,663	0/0:27,0:28:55.79:0,56,576	0/0:25,0:21:50.84:0,51,527	0/0:22,1:23:33.97:0,34,586	0/0:27,0:27:66.17:0,66,723	0/0:19,0:19:57.14:0,57,622	0/0:18,1:19:28.06:0,28,520	0/0:22,0:22:57.02:0,57,611	0/0:28,2:30:49.13:0,49,761	1/1:6,21:26:41.93:365,42,0	0/0:16,0:16:36.10:0,36,398	1/1:3,29:32:58.59:632,59,0	0/0:24,1:24:37.01:0,37,606	0/0:36,0:36:81.90:0,82,818	0/0:17,0:18:41.93:0,42,431	0/0:26,0:25:60.15:0,60,651	0/0:26,0:26:75:0,75,786	0/0:21,0:19:19.16:0,19,438	0/0:34,1:34:54.43:0,54,835	0/0:35,0:35:78.20:0,78,848	0/0:30,2:31:31.71:0,32,747	0/0:27,0:27:61.41:0,61,667	0/0:16,0:15:42.08:0,42,445
chr10	91623918	.	C	CA	3746.80	PASS	AB=0.956;AC=43;AF=0.768;AN=56;BaseQRankSum=-1.337;DP=580;FS=12.672;HRun=8;HaplotypeScore=104.7310;InbreedingCoeff=0.0977;MQ=68.35;MQ0=6;MQRankSum=1.108;QD=7.73;ReadPosRankSum=-3.317;VQSLOD=-0.0884;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:24.75:192,25,0	0/1:14,0:13:8.81:57,0,9	0/0:43,1:19:2.63:0,3,133	0/0:38,2:23:1.59:0,2,54	0/1:23,0:23:17.29:38,0,17	0/1:19,0:19:3.24:41,0,3	1/1:17,0:17:9.96:116,10,0	1/1:23,0:22:0.81:91,1,0	1/1:16,1:17:16.84:155,17,0	1/1:8,18:26:54.07:553,54,0	1/1:2,12:16:36.64:331,37,0	1/1:19,0:19:8.99:62,9,0	1/1:2,17:20:26.52:272,27,0	1/1:20,0:20:19.26:148,19,0	1/1:22,0:22:6.64:52,7,0	0/1:17,0:17:1.88:40,0,2	1/1:29,0:30:25.63:180,26,0	1/1:12,0:12:1.93:43,2,0	1/1:12,0:12:3.39:82,3,0	1/1:18,0:18:7.56:89,8,0	0/1:16,0:16:7.09:43,0,7	1/1:3,7:10:15:156,15,0	1/1:1,9:10:15.54:200,16,0	1/1:2,7:9:18.05:199,18,0	0/1:11,9:20:24.13:308,0,24	1/1:24,0:24:34.22:236,34,0	0/1:35,0:35:16.25:63,0,16	0/0:10,0:10:3.69:0,4,10
chr10	91624392	.	AGGAG	A	19890.10	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=11.196;DP=697;FS=3.861;HRun=0;HaplotypeScore=127.6627;InbreedingCoeff=0.9656;MQ=61.70;MQ0=3;MQRankSum=-0.855;QD=37.11;ReadPosRankSum=4.829;VQSLOD=5.1436;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,2498	0/0:13,0:13:36.10:0,36,823	0/0:20,0:15:16.31:0,16,557	0/0:31,0:23:37.87:0,38,842	1/1:0,29:29:80.88:1179,81,0	1/1:4,20:24:14.11:758,14,0	1/1:0,24:24:54.18:947,54,0	1/1:9,22:31:60.17:987,60,0	1/1:3,33:36:72.25:1293,72,0	1/1:3,26:29:81.26:1390,81,0	1/1:1,16:17:45:683,45,0	1/1:1,27:28:60.20:1054,60,0	1/1:1,19:20:42.14:754,42,0	1/1:3,24:27:57.20:1023,57,0	0/0:32,0:32:84.24:0,84,1866	1/1:3,25:28:63.22:1132,63,0	0/0:26,0:26:66.20:0,66,1554	1/1:2,13:15:24.08:431,24,0	1/1:2,10:11:24.24:317,24,0	1/1:3,23:26:69.07:1096,69,0	1/1:1,31:32:57.15:989,57,0	1/1:3,18:21:48.16:810,48,0	1/1:1,21:22:39.13:700,39,0	1/1:3,19:22:51.17:916,51,0	1/1:3,14:17:4.51:409,5,0	1/1:2,27:29:78.24:1318,78,0	1/1:5,27:32:59.38:1057,59,0	1/1:0,15:15:36.12:646,36,0
chr10	91625214	.	G	GACC	35143.52	PASS	AB=0.917;AC=53;AF=0.946;AN=56;BaseQRankSum=-7.140;DP=656;FS=16.621;HRun=0;HaplotypeScore=102.9818;InbreedingCoeff=0.7968;MQ=75.02;MQ0=0;MQRankSum=-7.215;QD=55.43;ReadPosRankSum=4.682;VQSLOD=5.6426;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,21:30:72.20:1567,72,0	1/1:0,11:11:33.11:759,33,0	0/0:22,0:22:42.92:0,43,778	0/1:10,0:11:1.71:2,0,227	1/1:2,35:38:89.59:2073,90,0	1/1:1,28:31:72.25:1659,72,0	1/1:1,24:27:75.21:1665,75,0	1/1:7,21:28:72.25:1613,72,0	1/1:1,13:14:36.12:829,36,0	1/1:4,31:36:99:2262,105,0	1/1:3,20:25:54.19:1244,54,0	1/1:7,17:25:48.11:1014,48,0	1/1:1,26:27:78.27:1796,78,0	1/1:2,16:18:48.16:1105,48,0	1/1:2,18:20:57.20:1313,57,0	1/1:6,13:20:45.15:1001,45,0	1/1:2,21:23:66.10:1372,66,0	1/1:2,6:9:11.82:341,12,0	1/1:5,16:21:60.19:1313,60,0	1/1:2,25:28:69.24:1589,69,0	1/1:3,14:17:30.10:692,30,0	1/1:2,15:17:36.12:827,36,0	1/1:2,25:27:72.25:1636,72,0	1/1:1,23:24:63.17:1403,63,0	1/1:3,19:22:48.16:1106,48,0	1/1:3,28:31:87.27:1952,87,0	1/1:7,30:37:81.28:1834,81,0	1/1:0,17:17:51.18:1176,51,0
chr10	91625256	.	GCTGAATCATGA	G	6197.98	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.707;DP=660;FS=1.043;HRun=0;HaplotypeScore=266.0323;InbreedingCoeff=0.9985;MQ=81.62;MQ0=0;MQRankSum=-10.864;QD=68.87;ReadPosRankSum=2.223;VQSLOD=4.4874;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,32:38:81.26:2774,81,0	1/1:3,11:14:24.07:846,24,0	0/0:20,0:21:55.41:0,55,2637	0/0:27,0:27:53.35:0,53,3344	0/0:32,0:32:96.29:0,96,4928	0/0:28,0:28:72.25:0,72,3880	0/0:20,0:20:48.16:0,48,2172	0/0:27,0:27:78.27:0,78,4036	0/0:10,0:10:30.10:0,30,1688	0/0:42,0:42:99:0,123,6630	0/0:32,0:32:93.32:0,93,4794	0/0:30,0:30:81.28:0,81,4395	0/0:25,0:25:69.19:0,69,3681	0/0:18,0:18:54.19:0,54,2812	1/1:1,12:13:30.10:1057,30,0	0/0:17,0:17:48.16:0,48,2653	1/1:6,19:25:45.15:1522,45,0	0/0:9,0:9:24.04:0,24,1105	0/0:21,0:21:51.17:0,51,2600	0/0:17,0:17:48.15:0,48,2585	0/0:16,0:16:48.16:0,48,2264	0/0:17,0:17:51.18:0,51,2722	0/0:32,0:32:87.30:0,87,4823	0/0:32,0:32:93.32:0,93,5205	0/0:22,0:22:60.21:0,60,3173	0/0:30,0:30:84.29:0,84,4632	0/0:31,0:31:87.24:0,87,4235	0/0:14,0:14:42.14:0,42,2287
chr10	91625670	.	A	AG	5130.85	PASS	AB=0.824;AC=52;AF=0.929;AN=56;BaseQRankSum=-5.328;DP=460;FS=13.678;HRun=8;HaplotypeScore=67.3886;InbreedingCoeff=0.3967;MQ=79.60;MQ0=1;MQRankSum=-3.083;QD=11.61;ReadPosRankSum=2.142;VQSLOD=2.5063;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,3:26:2.96:19,3,0	1/1:4,0:4:2.99:24,3,0	0/0:17,0:13:25.57:0,26,185	0/1:20,0:16:3.15:3,0,31	1/1:2,8:10:20.74:160,21,0	0/1:5,6:11:21.33:28,0,21	1/1:5,14:19:26.94:263,27,0	1/1:10,9:17:15.44:137,15,0	1/1:3,21:24:45.13:511,45,0	1/1:5,9:14:23.89:224,24,0	1/1:5,3:8:11.97:107,12,0	1/1:1,7:8:12.03:136,12,0	1/1:5,15:20:24.07:273,24,0	1/1:4,13:17:15.90:172,16,0	1/1:5,1:16:8.68:50,9,0	1/1:4,14:18:23.49:272,23,0	1/1:2,1:26:17.05:109,17,0	1/1:2,11:13:21.06:239,21,0	1/1:3,20:23:59.87:593,60,0	1/1:4,5:9:8.95:80,9,0	1/1:8,15:23:14.25:260,14,0	1/1:2,9:11:14.99:154,15,0	1/1:4,14:19:18.08:202,18,0	1/1:7,12:19:24.07:273,24,0	1/1:11,6:17:29.91:285,30,0	1/1:3,6:10:11.98:121,12,0	1/1:2,17:20:20.48:366,20,0	1/1:6,3:17:6.02:68,6,0
chr10	91626024	.	TGG	T	6291.47	PASS	AB=0.692;AC=43;AF=0.768;AN=56;BaseQRankSum=-7.968;DP=590;FS=20.687;HRun=12;HaplotypeScore=86.6810;InbreedingCoeff=0.8703;MQ=71.53;MQ0=18;MQRankSum=-0.630;QD=17.57;ReadPosRankSum=4.312;VQSLOD=2.0864;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:9.09:0,9,497	0/0:10,0:10:24.04:0,24,285	0/0:79,0:24:27.46:0,27,437	0/0:70,0:21:26.87:0,27,243	1/1:8,14:23:41.77:396,42,0	1/1:4,15:20:32.78:317,33,0	1/1:2,17:19:48.10:488,48,0	1/1:9,20:30:50.12:473,50,0	1/1:1,10:11:27.06:275,27,0	1/1:5,6:11:22.58:217,23,0	1/1:5,8:14:26.79:254,27,0	1/1:4,5:9:15.03:153,15,0	1/1:5,8:14:23.58:225,24,0	1/1:3,9:12:24.05:244,24,0	0/0:28,0:28:58:0,58,579	1/1:0,14:14:29.88:305,30,0	0/0:17,0:17:39.04:0,39,398	1/1:2,11:13:33.04:326,33,0	1/1:4,10:16:36.66:333,37,0	0/1:10,0:18:24.27:26,0,24	1/1:3,9:13:17.75:164,18,0	1/1:4,13:19:38.55:357,39,0	1/1:7,14:21:30.04:305,30,0	1/1:3,4:7:9.02:92,9,0	1/1:6,9:16:23.74:216,24,0	1/1:7,13:20:42.06:427,42,0	1/1:5,20:24:44.13:455,44,0	1/1:4,9:13:24.03:244,24,0
chr10	91628278	.	TA	T	464.55	PASS	AB=0.826;AC=14;AF=0.250;AN=56;BaseQRankSum=2.364;DP=357;FS=11.012;HRun=16;HaplotypeScore=42.7004;InbreedingCoeff=0.5640;MQ=55.35;MQ0=11;MQRankSum=2.275;QD=4.60;ReadPosRankSum=0.619;VQSLOD=0.4694;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:26:32.44:0,32,201	0/0:1,0:3:2.84:0,3,14	0/0:2,0:1:0.47:0,0,1	0/0:9,0:4:3.89:0,4,29	0/0:12,0:11:14.98:0,15,126	0/1:21,4:24:0.25:0,0,193	0/0:14,0:13:20.90:0,21,165	0/0:26,0:24:32.63:0,33,238	0/0:5,0:8:8.65:0,9,64	1/1:5,8:16:28.60:150,29,0	1/1:7,9:16:1.30:118,1,0	0/0:9,0:7:8.98:0,9,73	1/1:3,0:2:2.92:17,3,0	0/0:8,0:8:8.94:0,9,68	0/0:2,0:7:13.45:0,13,77	0/0:6,0:7:11.92:0,12,90	0/0:8,0:19:25.89:0,26,151	0/0:20,3:22:2.85:0,3,229	0/0:9,0:7:14.94:0,15,120	0/0:15,0:15:17.95:0,18,144	0/0:14,2:16:0.90:0,1,108	1/1:0,3:3:8.79:52,9,0	0/0:3,3:6:1.41:0,1,2	1/1:2,5:7:12.86:74,13,0	1/1:4,11:16:31.18:185,31,0	0/0:17,0:16:20.70:0,21,158	0/1:9,4:15:27.51:28,0,86	0/0:13,0:13:32.66:0,33,249
chr10	91629722	.	CA	C	7720.05	PASS	AB=0.712;AC=51;AF=0.911;AN=56;BaseQRankSum=-0.387;DP=582;FS=7.079;HRun=12;HaplotypeScore=68.4801;InbreedingCoeff=-0.0192;MQ=72.52;MQ0=1;MQRankSum=-1.883;QD=13.26;ReadPosRankSum=3.421;VQSLOD=5.0194;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:32:34.61:100,35,0	1/1:0,0:11:20.37:59,20,0	0/1:16,0:16:31.77:32,0,45	0/1:11,1:11:6.14:6,0,78	1/1:3,21:24:53.25:404,53,0	1/1:1,24:26:61.80:470,62,0	1/1:4,10:15:29.87:232,30,0	1/1:13,17:30:41.62:314,42,0	1/1:4,21:27:60.85:453,61,0	1/1:9,20:33:73.83:529,74,0	1/1:5,12:18:37.86:282,38,0	1/1:2,15:17:11.40:271,11,0	1/1:1,21:22:56.77:441,57,0	1/1:4,16:20:41.81:325,42,0	1/1:2,0:23:36.57:106,37,0	1/1:1,20:22:55.83:424,56,0	1/1:2,0:20:28.51:82,29,0	1/1:6,16:23:46.41:354,46,0	0/1:4,6:10:37.60:100,0,38	1/1:4,13:19:39.92:290,40,0	1/1:5,9:14:26.86:209,27,0	1/1:2,11:13:2.40:199,2,0	1/1:7,17:24:50.79:395,51,0	0/1:3,15:22:4.91:293,0,5	1/1:4,17:21:50.76:395,51,0	1/1:4,22:27:61.76:467,62,0	1/1:7,24:31:35.36:395,35,0	0/1:1,7:8:6.13:93,0,6
chr10	91630306	.	ATTTATTTATTTATTTAT	A	1712.36	PASS	AC=32;AF=0.762;AN=42;BaseQRankSum=-0.768;DP=88;FS=2.563;HRun=0;HaplotypeScore=60.6654;InbreedingCoeff=0.4601;MQ=50.25;MQ0=6;MQRankSum=-1.414;QD=29.02;ReadPosRankSum=-2.060;VQSLOD=1.7611;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:1:3.01:36,3,0	0/0:1,0:1:3.01:0,3,125	0/0:4,0:1:3.01:0,3,41	0/0:5,0:2:2.94:0,3,18	1/1:2,0:2:2.60:10,3,0	1/1:2,1:3:8.18:156,8,0	1/1:1,0:1:2.68:11,3,0	1/1:14,0:12:10.30:54,10,0	1/1:1,0:1:3.01:30,3,0	1/1:1,0:1:3.01:53,3,0	./.	./.	1/1:1,1:2:5.99:157,6,0	1/1:1,1:2:6.02:186,6,0	0/0:1,0:1:3.01:0,3,32	1/1:1,0:1:2.74:12,3,0	0/0:16,0:16:33.09:0,33,1304	1/1:4,1:5:11.72:196,12,0	1/1:5,1:4:8.86:207,9,0	./.	1/1:2,0:2:5.27:21,5,0	./.	./.	./.	1/1:2,0:2:5.69:60,6,0	1/1:4,0:4:11.44:108,11,0	./.	1/1:8,4:11:12.04:544,12,0
chr10	91630322	.	AT	A	1732.19	PASS	AB=1.000;AC=49;AF=0.907;AN=54;BaseQRankSum=-2.333;DP=119;FS=0.000;HRun=4;HaplotypeScore=32.9449;InbreedingCoeff=0.2729;MQ=63.25;MQ0=5;MQRankSum=-0.607;QD=16.19;ReadPosRankSum=-1.186;VQSLOD=1.9798;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:3.01:36,3,0	1/1:0,1:1:3.01:36,3,0	0/0:6,0:2:5.51:0,6,50	0/0:6,0:3:8.69:0,9,80	1/1:2,0:2:5.60:36,6,0	1/1:4,0:4:10.20:51,10,0	1/1:4,0:4:8.64:36,9,0	1/1:18,0:17:33.91:274,34,0	1/1:3,0:3:7.92:32,8,0	1/1:4,0:4:6.09:43,6,0	1/1:6,0:6:14.29:95,14,0	1/1:4,0:4:9.85:64,10,0	1/1:1,0:1:2.99:24,3,0	0/1:2,0:2:1:19,0,1	1/1:0,2:2:3.01:36,3,0	1/1:2,0:2:3.99:15,4,0	1/1:1,12:13:33.10:387,33,0	1/1:3,0:3:5.84:34,6,0	1/1:10,1:10:21.71:156,22,0	1/1:1,0:1:3.01:36,3,0	1/1:3,0:3:8.61:81,9,0	./.	1/1:3,0:3:8.10:34,8,0	1/1:4,0:4:3.19:44,3,0	1/1:4,0:4:5.40:47,5,0	1/1:5,0:5:6.15:81,6,0	1/1:1,0:1:3:25,3,0	1/1:5,0:5:14.97:123,15,0
chr10	91630331	.	ATT	A	267.20	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=4.291;DP=146;FS=21.181;HRun=8;HaplotypeScore=41.9967;InbreedingCoeff=0.4626;MQ=65.36;MQ0=5;MQRankSum=-4.724;QD=11.62;ReadPosRankSum=4.826;VQSLOD=-0.3334;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:6.02:73,6,0	1/1:1,0:1:2.97:20,3,0	0/0:8,0:4:12.04:0,12,196	0/0:7,0:3:7.84:0,8,99	0/0:2,0:2:6.02:0,6,95	0/0:6,0:6:11.93:0,12,222	0/0:5,0:5:15.05:0,15,244	0/0:20,0:19:54.18:0,54,847	0/0:4,0:4:12.03:0,12,171	0/0:5,0:5:15.05:0,15,240	0/0:10,0:10:25.33:0,25,369	0/0:4,0:4:12.04:0,12,185	0/0:2,0:2:0.38:0,0,46	0/0:2,0:2:0.10:0,0,44	1/1:1,2:3:3.01:36,3,0	0/0:1,0:2:6:0,6,72	1/1:10,2:12:26.57:262,27,0	0/0:4,0:4:5.37:0,5,145	0/0:14,0:13:29.57:0,30,531	0/0:2,0:2:6.01:0,6,68	0/0:4,0:4:12.04:0,12,177	0/0:3,0:3:9.03:0,9,146	0/0:3,0:3:9.03:0,9,145	0/0:5,0:5:12.04:0,12,190	0/0:4,0:4:12.04:0,12,191	0/0:6,0:6:18.06:0,18,276	0/0:1,0:1:3.01:0,3,49	0/1:5,0:5:9.18:9,0,39
chr10	91630333	.	T	TTA	471.15	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=2.732;DP=154;FS=0.000;HRun=0;HaplotypeScore=43.3207;InbreedingCoeff=0.4771;MQ=64.84;MQ0=5;MQRankSum=0.680;QD=20.48;ReadPosRankSum=3.921;VQSLOD=3.1756;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:6.02:73,6,0	1/1:0,1:1:3.01:53,3,0	0/0:8,0:4:12.04:0,12,180	0/0:7,0:3:8.92:0,9,101	0/1:2,0:2:0.20:0,0,0	0/0:6,0:6:10.30:0,10,99	0/0:5,0:5:3.33:0,3,50	0/0:20,0:19:15.69:0,16,193	0/0:5,0:5:2.02:0,2,24	0/0:6,0:6:6.09:0,6,82	0/0:11,0:11:15.30:0,15,200	0/0:4,0:4:3.07:0,3,24	0/0:2,0:2:5.98:0,6,65	0/0:2,0:2:5.83:0,6,37	1/1:3,0:3:3.01:36,3,0	1/1:2,0:2:3.38:11,3,0	1/1:5,8:13:30.09:431,30,0	0/0:4,0:4:10.31:0,10,81	0/0:16,0:15:21.53:0,22,254	0/0:2,0:2:5.88:0,6,42	0/0:4,0:4:8.56:0,9,75	0/0:4,0:4:9.03:0,9,134	0/0:4,0:4:0.82:0,1,21	0/0:5,0:5:8.03:0,8,73	0/0:4,0:4:2.01:0,2,34	0/0:6,0:6:11.69:0,12,94	0/0:1,0:1:3:0,3,26	0/0:5,0:5:14.95:0,15,118
chr10	91630488	.	TC	T	932.94	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.418;DP=314;FS=17.236;HRun=9;HaplotypeScore=70.5309;InbreedingCoeff=0.7923;MQ=78.44;MQ0=4;MQRankSum=-4.505;QD=19.04;ReadPosRankSum=1.704;VQSLOD=2.5904;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:18:39.02:356,39,0	1/1:0,4:4:8.85:82,9,0	0/0:34,1:15:18.87:0,19,157	0/0:38,0:17:20.58:0,21,165	0/0:2,0:2:6.02:0,6,69	0/0:16,0:16:39.10:0,39,436	0/0:7,0:7:20.97:0,21,208	0/0:23,0:23:51.10:0,51,572	0/0:2,0:2:6.01:0,6,60	0/0:7,0:7:15.04:0,15,166	0/0:3,0:3:6.02:0,6,69	0/0:5,0:5:15.01:0,15,160	0/0:6,0:6:18:0,18,192	0/0:5,0:5:12.04:0,12,138	1/1:4,4:8:20.95:182,21,0	0/0:6,0:6:18.05:0,18,207	1/1:1,18:19:51.03:466,51,0	0/0:23,0:22:62.18:0,62,615	0/0:13,0:13:26.96:0,27,271	0/0:8,0:8:24.07:0,24,276	0/0:11,0:11:24.06:0,24,267	0/0:4,0:4:9.03:0,9,104	0/0:2,0:2:6.02:0,6,69	0/0:16,0:16:30.05:0,30,331	0/0:2,0:2:6.01:0,6,61	0/0:5,0:5:12.04:0,12,138	0/0:11,1:12:8.66:0,9,353	0/0:13,0:13:18.02:0,18,194
chr10	91630526	.	C	CAA	7681.31	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-11.161;DP=546;FS=20.571;HRun=10;HaplotypeScore=113.4857;InbreedingCoeff=0.8764;MQ=79.01;MQ0=12;MQRankSum=2.702;QD=25.95;ReadPosRankSum=1.832;VQSLOD=3.1620;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:16.10:0,16,190	0/0:5,0:5:11.76:0,12,78	0/0:88,0:35:13.01:0,13,325	0/0:102,0:38:26.96:0,27,331	1/1:3,2:5:12.03:156,12,0	1/1:3,18:22:40.99:606,41,0	1/1:2,7:9:21.07:313,21,0	1/1:13,9:23:38.57:497,39,0	1/1:3,5:8:15:190,15,0	1/1:2,7:11:30.09:406,30,0	1/1:1,3:6:14.02:149,14,0	1/1:1,8:9:18.06:253,18,0	1/1:0,8:9:24.08:341,24,0	1/1:1,11:12:21.04:291,21,0	0/0:16,0:16:14.21:0,14,171	1/1:2,11:15:25.99:305,26,0	0/0:19,0:19:38.78:0,39,247	1/1:5,18:25:44.43:769,44,0	1/1:15,8:23:6.44:364,6,0	1/1:4,4:11:20.04:233,20,0	1/1:2,13:16:33:462,33,0	1/1:1,1:4:3.01:45,3,0	1/1:3,2:5:6.02:89,6,0	1/1:4,20:26:18.29:745,18,0	1/1:0,6:6:9.03:134,9,0	1/1:5,14:20:17.59:578,18,0	1/1:5,13:20:38.56:501,39,0	1/1:3,5:8:18.06:252,18,0
chr10	91630728	.	TTTTG	T	4708.51	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.417;DP=653;FS=14.659;HRun=0;HaplotypeScore=107.9518;InbreedingCoeff=0.9866;MQ=68.86;MQ0=1;MQRankSum=-1.327;QD=39.90;ReadPosRankSum=5.176;VQSLOD=4.4531;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,43:47:93.28:1637,93,0	1/1:0,5:5:11.93:214,12,0	0/0:32,0:25:31.41:0,31,1019	0/0:47,0:39:85.15:0,85,1788	0/0:22,0:22:50.84:0,51,1209	0/0:17,0:17:51.18:0,51,1280	0/0:26,0:26:72.25:0,72,1863	0/0:33,0:33:78.18:0,78,1732	0/0:21,0:21:60.20:0,60,1471	0/0:21,0:21:60.20:0,60,1521	0/0:16,0:16:42.11:0,42,951	0/0:17,0:17:48.16:0,48,1162	0/0:14,0:14:39.13:0,39,1007	0/0:14,0:14:39.13:0,39,970	1/1:2,25:27:69.24:1240,69,0	0/0:22,0:22:63.22:0,63,1629	1/1:4,35:39:90.31:1617,90,0	0/0:22,0:22:63.19:0,63,1509	0/0:38,0:36:93.32:0,93,2292	0/0:22,0:22:63.22:0,63,1530	0/0:21,0:21:54.17:0,54,1315	0/0:21,0:21:54.18:0,54,1281	0/0:19,0:19:57.18:0,57,1420	0/0:27,0:27:78.23:0,78,1846	0/0:15,0:15:42.14:0,42,1057	0/0:17,0:17:45.15:0,45,1070	0/0:25,0:24:65.43:0,65,1515	0/0:6,0:6:15.05:0,15,281
chr10	91631063	.	GC	G	4150.39	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.863;DP=748;FS=0.814;HRun=1;HaplotypeScore=69.1686;InbreedingCoeff=0.9994;MQ=86.10;MQ0=0;MQRankSum=-1.363;QD=39.15;ReadPosRankSum=3.374;VQSLOD=4.3515;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:99:1425,102,0	1/1:0,9:9:27.09:377,27,0	0/0:23,0:23:68.90:0,69,1004	0/0:24,1:25:66.11:0,66,934	0/0:28,0:28:84.25:0,84,1280	0/0:24,0:24:72.21:0,72,1101	0/0:21,0:21:63.19:0,63,960	0/0:34,0:34:99:0,102,1540	0/0:38,0:38:99:0,114,1745	0/0:30,0:30:90.31:0,90,1438	0/0:14,0:14:42.13:0,42,646	0/0:25,0:25:75.17:0,75,1099	0/0:20,0:20:60.19:0,60,931	0/0:28,0:28:84.29:0,84,1336	1/1:0,35:35:99:1426,102,0	0/0:31,0:31:93.32:0,93,1484	1/1:0,25:25:66.22:922,66,0	0/0:27,0:26:81.23:0,81,1236	0/0:17,0:17:51.17:0,51,794	0/0:31,0:31:93.32:0,93,1478	0/0:44,0:42:99:0,126,1941	0/0:25,0:25:75.24:0,75,1175	0/0:30,0:30:90.27:0,90,1386	0/0:34,0:34:99:0,102,1581	0/0:19,0:19:57.18:0,57,888	0/0:28,0:28:81.26:0,81,1248	0/0:37,0:36:99:0,111,1674	0/0:9,0:9:27.09:0,27,431
chr10	91632793	.	T	TG	1327.84	PASS	AB=0.952;AC=47;AF=0.904;AN=52;BaseQRankSum=-2.806;DP=338;FS=2.749;HRun=10;HaplotypeScore=57.7393;InbreedingCoeff=0.1531;MQ=64.67;MQ0=14;MQRankSum=-0.246;QD=4.92;ReadPosRankSum=-1.708;VQSLOD=0.3845;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:2.97:20,3,0	./.	0/0:62,2:19:17.43:0,17,191	0/1:59,0:25:3.58:4,0,38	1/1:6,3:9:2.96:19,3,0	1/1:20,0:20:17.74:155,18,0	0/1:8,0:8:27.67:38,0,28	1/1:15,0:17:16.11:94,16,0	1/1:5,0:5:6.40:41,6,0	1/1:6,0:6:11.71:85,12,0	1/1:4,0:4:5.87:40,6,0	1/1:8,0:8:19.14:139,19,0	1/1:7,0:7:8.87:59,9,0	1/1:5,0:5:8.91:64,9,0	1/1:5,0:5:2.37:8,2,0	0/1:5,1:6:9.96:42,0,10	1/1:8,0:8:6.57:31,7,0	1/1:20,0:20:0.31:89,0,0	1/1:11,0:11:5.97:45,6,0	./.	1/1:8,0:7:5.99:48,6,0	1/1:4,0:4:2.99:25,3,0	1/1:7,0:7:6.86:51,7,0	1/1:8,0:8:14.40:94,14,0	1/1:7,0:7:14.02:88,14,0	1/1:20,0:20:13.97:83,14,0	1/1:8,0:8:6.41:43,6,0	1/1:8,0:8:5.98:47,6,0
chr10	91632891	.	AGT	A	1237.99	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.124;DP=357;FS=13.907;HRun=0;HaplotypeScore=48.9976;InbreedingCoeff=0.9843;MQ=68.67;MQ0=0;MQRankSum=-5.295;QD=31.74;ReadPosRankSum=1.925;VQSLOD=4.5229;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:27.09:386,27,0	1/1:0,5:5:15.02:194,15,0	0/0:22,0:20:51.17:0,51,912	0/0:17,0:16:45.03:0,45,736	0/0:15,0:15:45.15:0,45,824	0/0:9,0:9:27.09:0,27,495	0/0:11,0:11:24.07:0,24,410	0/0:16,0:15:36.10:0,36,627	0/0:17,0:17:51.16:0,51,904	0/0:10,0:10:30.10:0,30,550	0/0:10,0:10:24.08:0,24,440	0/0:9,0:9:21.07:0,21,383	0/0:9,0:9:27.09:0,27,494	0/0:16,0:16:45.15:0,45,824	1/1:0,6:6:18.06:258,18,0	0/0:8,0:8:18.06:0,18,330	1/1:0,18:18:39.13:558,39,0	0/0:16,1:16:39.13:0,39,713	0/0:16,0:16:42.14:0,42,770	0/0:7,0:7:21.07:0,21,370	0/0:20,0:19:45.15:0,45,818	0/0:8,0:8:21.07:0,21,384	0/0:9,0:9:24.04:0,24,439	0/0:17,0:17:45.15:0,45,824	0/0:14,0:14:42.14:0,42,770	0/0:19,0:19:54.18:0,54,963	0/0:14,0:14:39.13:0,39,714	0/0:8,0:8:24.08:0,24,439
chr10	91632940	.	TAA	T	3226.07	PASS	AB=0.666;AC=41;AF=0.732;AN=56;BaseQRankSum=-5.793;DP=452;FS=0.509;HRun=17;HaplotypeScore=70.3789;InbreedingCoeff=0.5225;MQ=79.33;MQ0=5;MQRankSum=1.296;QD=9.38;ReadPosRankSum=3.916;VQSLOD=1.2956;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:17:42.54:0,43,444	0/0:4,0:7:21.04:0,21,223	0/0:50,0:18:20.07:0,20,175	0/1:33,0:21:9.84:10,0,58	1/1:4,14:19:44.28:325,44,0	1/1:3,4:11:2.31:89,2,0	1/1:3,8:13:28.17:194,28,0	1/1:12,16:31:40.52:365,41,0	1/1:4,9:13:17.74:142,18,0	1/1:4,10:14:29.44:223,29,0	0/1:5,9:16:0.62:199,0,1	1/1:3,7:12:8.44:98,8,0	1/1:2,5:7:14.84:113,15,0	1/1:5,9:14:20.82:166,21,0	0/0:5,0:8:15.03:0,15,157	1/1:5,4:9:2.51:62,3,0	0/0:20,0:25:45.52:0,46,467	1/1:5,8:14:6.59:126,7,0	1/1:8,8:18:14.41:146,14,0	1/1:3,6:9:17.58:130,18,0	0/1:3,10:14:4.91:89,0,5	0/1:2,8:11:3.97:84,0,4	1/1:4,7:13:10.17:120,10,0	1/1:0,9:11:23.45:166,23,0	1/1:3,10:16:14.78:225,15,0	0/1:7,7:17:14.99:143,0,15	1/1:10,12:23:16.99:130,17,0	1/1:0,2:3:8.73:59,9,0
chr10	91634289	.	AT	A	908.94	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.170;DP=606;FS=0.000;HRun=12;HaplotypeScore=68.3076;InbreedingCoeff=0.8827;MQ=71.75;MQ0=0;MQRankSum=0.448;QD=13.17;ReadPosRankSum=1.627;VQSLOD=3.8341;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,10:15:13.42:213,13,0	1/1:2,9:11:23.90:186,24,0	0/0:13,0:11:7.67:0,8,81	0/0:15,0:12:17.20:0,17,119	0/0:26,0:28:62.26:0,62,575	0/0:21,0:21:58.65:0,59,570	0/0:20,0:20:45.09:0,45,503	0/0:20,0:23:39.21:0,39,355	0/0:27,0:27:41.38:0,41,535	0/0:34,4:39:20.49:0,20,723	0/0:23,0:24:41.78:0,42,389	0/0:20,1:21:23.02:0,23,387	0/0:22,1:23:36.81:0,37,519	0/0:10,0:10:27.03:0,27,263	1/1:3,12:16:28.20:214,28,0	0/0:26,1:30:36.71:0,37,534	1/1:2,25:27:10.85:450,11,0	0/0:18,0:19:44.81:0,45,406	0/0:17,0:21:33.26:0,33,437	0/0:28,0:28:51.08:0,51,506	0/0:12,0:13:9.90:0,10,93	0/0:26,2:28:19.64:0,20,553	0/0:26,1:27:51.87:0,52,688	0/0:17,2:19:1.48:0,1,358	0/0:23,0:23:61.37:0,61,612	0/0:18,0:19:29.89:0,30,288	0/0:28,0:29:61.07:0,61,553	0/0:14,1:16:15.62:0,16,314
chr10	91635067	.	G	GGT	956.87	PASS	AB=0.948;AC=31;AF=0.596;AN=52;BaseQRankSum=-1.743;DP=422;FS=12.238;HRun=0;HaplotypeScore=78.2930;InbreedingCoeff=0.3466;MQ=63.41;MQ0=14;MQRankSum=0.758;QD=3.65;ReadPosRankSum=-1.018;VQSLOD=1.1163;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:21:2.73:0,3,14	0/1:3,0:3:0:0,0,0	0/1:28,0:12:0:0,0,0	./.	0/0:13,0:13:2.97:0,3,27	0/1:10,0:12:15.19:15,0,37	0/0:20,0:22:14.87:0,15,142	./.	0/1:13,0:13:0:0,0,0	1/1:12,0:12:3:25,3,0	1/1:12,0:12:11.99:113,12,0	1/1:6,3:9:5.84:88,6,0	1/1:14,0:13:9.48:109,9,0	1/1:8,5:13:6.02:88,6,0	0/0:13,0:19:17.04:0,17,84	0/0:19,0:20:17.08:0,17,150	0/0:19,0:25:17.52:0,18,84	0/0:13,0:13:18.05:0,18,193	1/1:20,2:21:2.97:44,3,0	0/1:8,5:13:23.12:42,0,23	1/1:13,0:13:2.16:78,2,0	1/1:7,0:12:4.25:29,4,0	1/1:12,0:12:3:27,3,0	1/1:16,1:18:15.01:164,15,0	1/1:15,1:16:15.04:195,15,0	1/1:21,0:20:3:28,3,0	0/1:10,1:11:25.69:38,0,26	0/1:7,0:8:30.29:30,0,67
chr10	91635924	.	TCA	T	815.26	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=1.261;DP=653;FS=9.350;HRun=0;HaplotypeScore=119.3147;InbreedingCoeff=0.8279;MQ=72.90;MQ0=22;MQRankSum=1.484;QD=11.17;ReadPosRankSum=0.508;VQSLOD=3.0938;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:2.92:310,0,3	1/1:5,0:5:8.94:68,9,0	0/0:89,0:35:76.19:0,76,672	0/0:107,0:40:59.02:0,59,658	0/0:21,0:21:35.76:0,36,287	0/0:19,0:19:34.78:0,35,302	0/0:18,0:18:22.97:0,23,174	0/0:29,0:29:87.03:0,87,789	0/0:17,0:17:37.68:0,38,265	0/0:15,0:12:30.06:0,30,330	0/0:12,0:11:14.60:0,15,149	0/0:18,0:18:10.22:0,10,44	0/0:13,0:13:32.85:0,33,281	0/0:13,0:13:18.62:0,19,135	1/1:20,1:21:53.93:448,54,0	0/0:28,0:28:40.28:0,40,287	1/1:0,19:19:12.01:130,12,0	0/0:19,0:19:53.27:0,53,405	0/0:13,0:13:32.23:0,32,275	0/0:21,0:20:43.40:0,43,337	0/0:20,0:19:38.90:0,39,317	0/0:11,0:11:26.98:0,27,260	0/0:8,0:6:14.97:0,15,122	0/0:19,0:19:45.02:0,45,555	0/0:11,0:10:14.83:0,15,125	0/0:20,0:20:52.52:0,53,422	0/0:22,0:22:31.11:0,31,206	0/0:17,0:17:11.33:0,11,91
chr10	91635941	.	GAGAGAGAGAGAGAGAC	G	3163.82	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-2.148;DP=642;FS=4.166;HRun=0;HaplotypeScore=194.7051;InbreedingCoeff=0.0803;MQ=56.49;MQ0=27;MQRankSum=-0.877;QD=8.37;ReadPosRankSum=-3.387;VQSLOD=2.0414;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:34.97:0,35,1617	0/0:6,0:5:6.01:0,6,126	0/0:74,0:22:0.91:0,1,66	0/0:97,0:22:9.68:0,10,203	0/1:15,0:17:16.46:16,0,23	0/0:22,0:22:5.60:0,6,52	0/1:26,0:26:1.46:1,0,37	1/1:19,0:19:4.50:214,4,0	0/1:14,0:14:47.11:231,0,47	0/1:17,0:14:47.78:48,0,871	0/0:11,0:10:1.82:0,2,192	1/1:23,1:24:12.04:362,12,0	0/1:13,0:13:32.04:32,0,275	1/1:13,0:13:9.03:219,9,0	0/1:25,0:25:11.82:12,0,1095	0/1:30,0:30:19.99:20,0,156	0/1:20,0:20:9.99:10,0,576	0/1:22,0:22:23.21:23,0,586	1/1:14,0:13:29.87:244,30,0	1/1:20,1:20:22.86:284,23,0	1/1:22,2:23:31.27:288,31,0	0/1:6,0:6:15.90:16,0,260	0/0:5,0:3:6.01:0,6,117	0/0:18,0:18:6.69:0,7,1329	1/1:9,0:8:2.97:25,3,0	0/1:20,0:20:6.35:325,0,6	1/1:23,2:25:13.58:786,14,0	1/1:18,1:19:8.70:178,9,0
chr10	91635943	.	GAGAGAGAGAGAGAC	G	5299.41	PASS	AB=0.987;AC=34;AF=0.607;AN=56;BaseQRankSum=-5.297;DP=628;FS=11.006;HRun=0;HaplotypeScore=170.4479;InbreedingCoeff=-0.0163;MQ=53.78;MQ0=28;MQRankSum=-0.292;QD=10.82;ReadPosRankSum=-4.080;VQSLOD=1.1441;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:30.79:31,0,1228	0/0:4,0:3:3.01:0,3,101	0/1:71,0:21:7.41:7,0,44	0/0:99,0:22:1.65:0,2,101	0/1:15,2:17:0.36:61,0,0	0/0:21,0:21:5.47:0,5,26	0/1:26,1:27:10.15:46,0,10	1/1:18,0:18:38.81:383,39,0	1/1:11,4:15:32.84:541,33,0	0/1:17,0:14:51.24:51,0,699	0/0:9,0:8:1.74:0,2,166	1/1:3,22:25:12.04:464,12,0	0/1:13,0:13:80.80:81,0,214	1/1:2,11:13:9.03:354,9,0	0/1:25,0:25:11.99:12,0,894	0/1:29,0:29:43:90,0,43	0/1:18,0:18:36.59:37,0,451	0/1:22,0:22:75.44:75,0,317	1/1:5,9:13:30.87:338,31,0	1/1:20,0:19:26.61:319,27,0	1/1:22,1:22:39.40:410,39,0	0/1:6,0:6:15.90:16,0,210	0/0:5,0:3:5.93:0,6,82	0/1:17,0:17:83.25:83,0,1087	1/1:9,0:8:6.46:50,6,0	1/1:0,20:20:51.11:494,51,0	1/1:6,19:25:32.99:1118,33,0	1/1:2,16:18:9.03:237,9,0
chr10	91635949	.	GAGAGAGAC	G	5663.43	PASS	AB=0.958;AC=43;AF=0.768;AN=56;BaseQRankSum=-4.939;DP=631;FS=1.259;HRun=0;HaplotypeScore=138.7459;InbreedingCoeff=-0.1851;MQ=53.33;MQ0=26;MQRankSum=-1.790;QD=9.11;ReadPosRankSum=-4.897;VQSLOD=2.0708;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:99:116,0,596	0/1:5,0:4:32.17:41,0,32	0/1:57,0:17:14.61:15,0,30	0/1:87,0:21:34.09:34,0,71	1/1:18,0:18:5.80:109,6,0	0/1:5,17:22:4.72:76,0,5	1/1:1,26:27:5.93:97,6,0	1/1:21,0:21:53.70:431,54,0	1/1:15,0:15:32.84:359,33,0	0/1:23,0:20:99:241,0,330	0/0:9,0:8:2.08:0,2,89	1/1:23,0:23:12.04:240,12,0	0/1:13,0:13:71.38:103,0,71	1/1:12,0:12:9.03:172,9,0	0/1:25,0:25:99:104,0,196	1/1:6,25:31:21.80:507,22,0	0/1:19,0:19:87.84:88,0,96	1/1:22,0:21:57.61:466,58,0	1/1:15,0:13:31.12:262,31,0	1/1:18,0:17:26.52:252,27,0	1/1:29,0:28:51.34:423,51,0	0/1:7,0:7:75.92:85,0,76	1/1:6,0:4:5.99:50,6,0	0/1:24,0:24:99:213,0,538	1/1:10,0:9:12.46:101,12,0	1/1:20,0:20:51.23:433,51,0	1/1:24,0:24:32.98:548,33,0	1/1:18,0:18:8.95:98,9,0
chr10	91636468	.	T	TG	3894.22	PASS	AB=0.529;AC=7;AF=0.125;AN=56;BaseQRankSum=-9.073;DP=635;FS=11.907;HRun=1;HaplotypeScore=59.1233;InbreedingCoeff=0.8319;MQ=81.17;MQ0=0;MQRankSum=-1.536;QD=39.34;ReadPosRankSum=1.700;VQSLOD=3.4574;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:81.21:1187,81,0	0/1:1,8:9:11.86:333,0,12	0/0:22,0:23:57.05:0,57,707	0/0:13,0:13:32.93:0,33,383	0/0:36,0:36:99:0,105,1348	0/0:21,0:21:57.17:0,57,714	0/0:16,0:16:45.14:0,45,572	0/0:40,0:40:99:0,120,1525	0/0:18,0:18:51.17:0,51,662	0/0:21,0:21:63.20:0,63,818	0/0:26,0:26:72.23:0,72,935	0/0:20,0:20:57.19:0,57,740	0/0:15,0:15:45.15:0,45,584	0/0:16,0:16:48.14:0,48,608	1/1:1,28:29:84.28:1258,84,0	0/0:19,0:19:57.17:0,57,726	1/1:1,27:28:75.25:1118,75,0	0/0:21,0:21:63.17:0,63,788	0/0:37,0:37:99:0,102,1305	0/0:32,0:32:96.31:0,96,1246	0/0:11,0:11:30.10:0,30,390	0/0:25,0:25:75.24:0,75,973	0/0:21,0:21:63.17:0,63,789	0/0:22,0:22:66.21:0,66,857	0/0:16,0:16:48.11:0,48,604	0/0:31,0:31:93.30:0,93,1196	0/0:32,0:32:90.29:0,90,1167	0/0:4,0:4:9.03:0,9,117
chr10	91637553	.	CA	C	1638.32	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.203;DP=544;FS=2.267;HRun=8;HaplotypeScore=54.7461;InbreedingCoeff=0.9067;MQ=84.37;MQ0=0;MQRankSum=-3.148;QD=22.44;ReadPosRankSum=0.796;VQSLOD=4.1462;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:48.08:464,48,0	1/1:0,8:8:24.04:232,24,0	0/0:27,0:25:42.83:0,43,465	0/0:18,0:18:27.22:0,27,373	0/0:22,0:22:63.19:0,63,761	0/0:26,0:26:69.19:0,69,812	0/0:16,0:16:42.13:0,42,507	0/0:21,0:21:54.15:0,54,632	0/0:17,0:17:51.16:0,51,616	0/0:22,0:22:60.18:0,60,721	0/0:18,0:18:48.15:0,48,580	0/0:24,0:24:72.22:0,72,868	0/0:20,0:20:48.15:0,48,580	0/0:19,0:19:57.17:0,57,689	1/1:2,14:16:2.82:311,3,0	0/0:20,0:20:60.18:0,60,725	1/1:2,29:31:81.13:782,81,0	0/0:17,0:17:39.05:0,39,441	0/0:12,1:13:4.12:0,4,333	0/0:26,0:26:63.19:0,63,761	0/0:26,0:26:75.22:0,75,895	0/0:25,0:25:63.18:0,63,749	0/0:10,0:10:24.07:0,24,290	0/0:18,0:17:54.17:0,54,652	0/0:18,0:18:54.17:0,54,652	0/0:19,0:19:57.17:0,57,689	0/0:18,0:18:48.15:0,48,580	0/0:11,0:11:24.96:0,25,292
chr10	91638417	.	GT	G	9603.51	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.075;DP=434;FS=1.078;HRun=9;HaplotypeScore=44.2523;InbreedingCoeff=0.8968;MQ=69.62;MQ0=1;MQRankSum=-4.356;QD=23.20;ReadPosRankSum=4.565;VQSLOD=5.1654;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:33.02:301,33,0	1/1:0,4:4:12.01:110,12,0	0/0:12,0:11:26.96:0,27,293	0/0:8,0:6:8.73:0,9,89	1/1:1,20:21:48:439,48,0	1/1:0,20:20:60.03:549,60,0	1/1:2,9:11:24.01:220,24,0	1/1:7,23:30:66:599,66,0	1/1:0,11:11:30.02:275,30,0	1/1:4,16:20:51.01:462,51,0	1/1:2,19:21:54.02:494,54,0	1/1:2,11:13:33.02:302,33,0	1/1:1,11:12:33.02:302,33,0	1/1:1,18:20:50.06:445,50,0	1/1:1,13:14:33.02:302,33,0	1/1:2,15:17:42.02:384,42,0	1/1:3,12:15:29.68:267,30,0	1/1:1,15:16:42.02:384,42,0	1/1:4,20:24:45.99:528,46,0	1/1:2,28:30:78.02:714,78,0	1/1:1,3:4:9:82,9,0	1/1:0,7:7:21.01:192,21,0	1/1:0,16:16:42.02:384,42,0	1/1:0,5:5:15.01:137,15,0	1/1:0,21:21:60.03:549,60,0	1/1:3,17:20:51.02:467,51,0	1/1:1,23:24:66.04:604,66,0	1/1:0,4:4:12.01:110,12,0
chr10	91639428	.	GA	G	12992.80	PASS	AB=0.917;AC=45;AF=0.804;AN=56;BaseQRankSum=7.578;DP=641;FS=2.020;HRun=9;HaplotypeScore=63.9601;InbreedingCoeff=0.8823;MQ=74.44;MQ0=0;MQRankSum=-2.822;QD=23.37;ReadPosRankSum=0.807;VQSLOD=5.7735;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:63:0,63,697	0/0:6,0:6:15.04:0,15,173	0/1:10,1:11:25.41:25,0,142	0/0:14,0:14:24.01:0,24,248	1/1:5,30:35:87.04:796,87,0	1/1:1,26:27:75.04:684,75,0	1/1:3,18:21:54.02:494,54,0	1/1:4,30:35:89.03:789,89,0	1/1:3,15:18:39.02:357,39,0	1/1:1,26:27:78.04:714,78,0	1/1:2,27:29:72.02:658,72,0	1/1:0,27:27:72.04:659,72,0	1/1:4,30:34:87.04:796,87,0	1/1:1,12:13:36.02:330,36,0	0/0:29,0:29:81.24:0,81,935	1/1:1,23:24:63.03:577,63,0	0/0:15,0:15:39.07:0,39,435	1/1:1,14:15:33.02:302,33,0	1/1:2,18:20:54.01:489,54,0	1/1:2,29:31:78.02:714,78,0	1/1:3,23:26:63.03:577,63,0	1/1:0,23:23:69.04:632,69,0	1/1:2,21:23:54.03:494,54,0	1/1:0,9:9:27.01:247,27,0	1/1:1,28:29:78.04:714,78,0	1/1:3,33:36:99:902,99,0	1/1:3,32:35:90.05:824,90,0	1/1:0,8:8:24.01:220,24,0
chr10	91640554	.	C	CATT	4263.36	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=0.734;DP=525;FS=1.652;HRun=0;HaplotypeScore=84.7026;InbreedingCoeff=0.9984;MQ=78.83;MQ0=0;MQRankSum=-6.848;QD=60.91;ReadPosRankSum=1.545;VQSLOD=6.8795;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,11:15:42.14:940,42,0	1/1:1,9:10:27.09:605,27,0	0/0:15,0:15:41.76:0,42,620	0/0:13,0:13:36.11:0,36,584	0/0:18,0:18:51.17:0,51,870	0/0:22,0:22:63.20:0,63,1042	0/0:17,0:17:48.16:0,48,807	0/0:25,0:25:72.22:0,72,1158	0/0:19,0:19:51.16:0,51,840	0/0:21,0:21:63.22:0,63,1059	0/0:26,0:26:72.25:0,72,1228	0/0:13,0:13:39.13:0,39,665	0/0:15,0:15:45.15:0,45,765	0/0:23,0:23:60.21:0,60,1023	1/1:3,18:21:60.19:1318,60,0	0/0:23,0:23:66.20:0,66,1066	1/1:4,20:24:60.21:1400,60,0	0/0:8,0:7:21.07:0,21,347	0/0:21,0:21:63.20:0,63,1046	0/0:35,0:35:99:0,99,1673	0/0:19,0:19:54.18:0,54,907	0/0:18,0:18:54.17:0,54,892	0/0:16,0:16:45.14:0,45,741	0/0:18,0:18:48.16:0,48,819	0/0:16,0:16:48.16:0,48,812	0/0:16,0:16:45.15:0,45,767	0/0:27,0:27:78.24:0,78,1264	0/0:11,0:11:33.11:0,33,562
chr10	91640584	.	TC	T	1070.92	PASS	AB=0.899;AC=10;AF=0.179;AN=56;BaseQRankSum=5.838;DP=569;FS=0.000;HRun=10;HaplotypeScore=83.8540;InbreedingCoeff=0.7380;MQ=81.45;MQ0=3;MQRankSum=-5.215;QD=10.01;ReadPosRankSum=2.096;VQSLOD=2.7407;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,10:18:24.87:231,25,0	1/1:4,6:10:17.97:156,18,0	0/0:40,0:31:44.66:0,45,502	0/0:45,0:26:39.77:0,40,388	0/0:23,0:23:48.93:0,49,508	0/0:19,0:19:36.09:0,36,389	0/1:12,2:14:20.07:20,0,215	0/0:20,1:20:9.02:0,9,279	0/0:19,1:20:15.53:0,16,361	0/0:16,0:16:26.91:0,27,280	0/0:24,1:25:31.04:0,31,535	0/0:15,0:15:34.84:0,35,333	0/0:16,0:16:33.03:0,33,339	0/0:17,2:19:19.13:0,19,423	1/1:4,19:23:59.95:511,60,0	0/0:17,1:18:16.24:0,16,384	1/1:4,13:18:37.90:306,38,0	0/0:9,0:8:24.06:0,24,260	0/0:24,0:25:56.80:0,57,537	0/0:27,1:29:29.50:0,30,472	0/1:22,2:24:14.58:15,0,314	0/0:18,0:18:42.07:0,42,443	0/0:14,0:14:21.05:0,21,224	0/0:15,0:15:39:0,39,414	0/0:15,0:15:37.96:0,38,344	0/0:16,0:17:35.88:0,36,358	0/0:26,0:28:39.70:0,40,577	0/0:14,0:14:20.98:0,21,197
chr10	91642646	.	G	GA	4598.64	PASS	AB=0.623;AC=24;AF=0.429;AN=56;BaseQRankSum=-10.965;DP=487;FS=2.871;HRun=10;HaplotypeScore=49.4451;InbreedingCoeff=0.4437;MQ=79.30;MQ0=4;MQRankSum=-1.290;QD=18.03;ReadPosRankSum=-0.850;VQSLOD=5.0862;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:47.87:0,48,387	0/0:8,0:9:20.01:0,20,154	0/0:36,0:20:22.61:0,23,170	0/0:21,0:15:11.45:0,11,69	1/1:5,18:25:50.90:527,51,0	1/1:4,11:15:32.92:334,33,0	0/1:3,13:16:10.19:312,0,10	1/1:4,19:23:35.46:563,35,0	0/1:3,8:11:10:113,0,10	0/0:26,1:28:10.18:0,10,479	0/0:19,0:20:49.96:0,50,398	0/1:3,9:13:19.42:193,0,19	0/0:23,0:24:55.94:0,56,449	1/1:1,6:7:14.63:138,15,0	0/1:11,1:12:2.03:2,0,192	1/1:5,9:15:2.26:214,2,0	0/0:20,0:21:55.96:0,56,449	0/1:6,6:11:44.75:136,0,45	1/1:7,19:27:16.78:557,17,0	1/1:4,12:16:33.49:334,33,0	1/1:4,8:12:1.79:207,2,0	0/0:14,1:15:0.97:0,1,214	0/0:12,0:12:29:0,29,228	0/0:9,0:9:23.96:0,24,197	0/0:16,0:16:41.93:0,42,340	0/1:5,19:24:4.76:569,0,5	0/1:5,12:17:0.58:200,0,1	0/1:2,8:10:0.54:200,0,1
chr10	91642984	.	T	TTA	23849.08	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-5.521;DP=518;FS=0.000;HRun=0;HaplotypeScore=66.6450;InbreedingCoeff=0.7600;MQ=73.40;MQ0=1;MQRankSum=-5.090;QD=47.51;ReadPosRankSum=5.179;VQSLOD=6.1968;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:37:96.33:1820,96,0	1/1:0,4:4:6.02:114,6,0	0/1:13,0:12:0.10:0,0,180	0/0:16,0:14:38.90:0,39,498	1/1:0,28:28:75.26:1401,75,0	1/1:1,21:22:57.20:1081,57,0	1/1:4,15:19:39.13:740,39,0	1/1:0,23:23:69.22:1266,69,0	1/1:2,15:17:36.12:683,36,0	1/1:1,18:19:51.05:894,51,0	1/1:0,18:18:51.17:927,51,0	1/1:0,14:14:36.12:682,36,0	1/1:1,16:17:38.96:731,39,0	1/1:0,16:16:42.14:796,42,0	1/1:2,23:25:66.23:1245,66,0	1/1:0,20:20:51.17:967,51,0	1/1:1,37:39:96.33:1820,96,0	1/1:0,17:17:51.17:967,51,0	1/1:1,24:26:75.23:1333,75,0	1/1:0,12:12:27.09:511,27,0	1/1:0,9:9:24.08:455,24,0	1/1:1,3:4:8.95:126,9,0	1/1:1,14:15:36.12:682,36,0	1/1:0,9:9:24.08:455,24,0	1/1:0,16:16:45.15:853,45,0	1/1:0,26:26:78.26:1427,78,0	1/1:1,31:32:84.29:1588,84,0	1/1:0,5:5:15.05:284,15,0
chr10	91643356	.	GGTGT	G	2990.69	PASS	AB=0.857;AC=22;AF=0.393;AN=56;BaseQRankSum=-0.116;DP=382;FS=3.693;HRun=0;HaplotypeScore=82.3067;InbreedingCoeff=0.6126;MQ=61.96;MQ0=5;MQRankSum=4.019;QD=16.71;ReadPosRankSum=0.657;VQSLOD=3.3226;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:25:6.02:0,6,119	0/0:7,0:6:3.01:0,3,70	0/0:19,0:12:9.03:0,9,188	0/1:29,0:16:17.66:18,0,132	1/1:5,5:11:18.05:269,18,0	0/0:3,0:3:3.01:0,3,38	0/0:11,0:13:21.06:0,21,299	1/1:13,9:22:24.03:335,24,0	1/1:3,6:10:19.61:270,20,0	0/0:11,0:11:30.10:0,30,567	0/0:12,0:13:5.54:0,6,102	1/1:5,8:13:17.95:290,18,0	0/0:6,0:7:6.02:0,6,90	1/1:2,2:5:9.02:125,9,0	0/0:14,0:12:3.48:0,3,50	0/0:9,0:13:6.02:0,6,105	0/0:11,0:10:6.49:0,6,104	0/0:8,0:9:6.49:0,6,101	1/1:6,1:8:12.03:170,12,0	1/1:4,9:13:21.07:338,21,0	1/1:17,14:32:23.57:499,24,0	0/0:6,0:14:12.04:0,12,243	0/0:17,0:17:3.01:0,3,37	0/0:10,0:13:5.08:0,5,118	0/0:7,0:12:6.02:0,6,102	0/1:9,6:15:41.63:199,0,42	1/1:4,10:14:27.09:433,27,0	1/1:1,5:6:15.05:241,15,0
chr10	91644580	.	TTGTGTGTGTGTGTG	T	10486.50	PASS	AB=0.812;AC=43;AF=0.896;AN=48;BaseQRankSum=3.286;DP=486;FS=4.841;HRun=0;HaplotypeScore=197.0749;InbreedingCoeff=0.1523;MQ=51.74;MQ0=15;MQRankSum=1.453;QD=24.39;ReadPosRankSum=3.178;VQSLOD=3.4339;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:12.04:359,12,0	./.	./.	./.	1/1:13,4:18:6.02:154,6,0	1/1:12,9:21:24.55:936,25,0	1/1:14,1:13:10.25:172,10,0	1/1:15,0:17:1.71:23,2,0	1/1:8,10:20:30.10:1131,30,0	0/1:14,0:19:99:337,0,168	1/1:16,0:23:18.06:586,18,0	./.	1/1:9,0:15:8.68:292,9,0	1/1:6,10:17:24.55:918,25,0	1/1:24,0:25:24.08:781,24,0	1/1:9,8:17:15.99:580,16,0	1/1:20,0:20:3.01:98,3,0	1/1:9,4:13:15.05:537,15,0	0/0:10,0:10:1.82:0,2,5	1/1:7,6:13:9.50:293,10,0	0/1:18,2:19:0:0,0,0	1/1:5,1:9:6.02:215,6,0	1/1:12,0:17:12.04:391,12,0	1/1:18,0:20:6.02:195,6,0	1/1:10,0:15:15.05:489,15,0	0/1:16,9:23:99:567,0,162	1/1:15,12:27:30.97:1079,31,0	1/1:8,4:9:9.03:351,9,0
chr10	91644614	.	GTGTGTGTGTGTGTGTGCGCACT	G	3217.88	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=4.625;DP=412;FS=21.240;HRun=0;HaplotypeScore=236.3668;InbreedingCoeff=-0.1405;MQ=46.57;MQ0=29;MQRankSum=-4.673;QD=10.87;ReadPosRankSum=4.121;VQSLOD=1.0022;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:12.04:722,12,0	1/1:6,0:6:2.85:69,3,0	0/0:17,0:3:7.27:0,7,106	0/0:16,0:1:2.50:0,2,9	0/1:12,0:12:0.86:1,0,491	0/0:17,0:16:3.28:0,3,545	0/1:14,0:11:54.56:55,0,601	0/1:12,0:11:11.69:12,0,593	0/1:18,0:18:21.97:22,0,399	0/1:18,0:17:99:102,0,1308	0/1:17,0:17:99:122,0,785	0/0:7,0:6:15.05:0,15,463	0/1:12,0:12:43.37:43,0,547	0/1:15,0:15:3:3,0,423	1/1:2,17:18:24.08:1499,24,0	0/0:15,0:15:11.29:0,11,448	1/1:18,0:18:14.30:451,14,0	0/0:12,0:10:13.10:0,13,527	0/0:3,0:2:2.84:0,3,14	0/1:12,0:12:1.89:2,0,504	0/0:21,0:20:19.88:0,20,601	0/1:8,0:7:4.19:4,0,504	0/1:11,0:9:67.29:67,0,283	0/1:18,0:17:51.11:51,0,590	0/1:10,0:10:99:119,0,293	0/1:18,0:17:9.81:10,0,1198	0/1:25,0:25:24.10:24,0,864	0/0:8,0:5:4.09:0,4,121
chr10	91644630	.	GCGCACT	G	989.70	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=4.139;DP=472;FS=0.806;HRun=0;HaplotypeScore=175.2529;InbreedingCoeff=0.7183;MQ=62.69;MQ0=23;MQRankSum=-3.018;QD=8.46;ReadPosRankSum=1.775;VQSLOD=2.8454;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:12.04:197,12,0	1/1:2,6:8:3.01:70,3,0	0/1:23,0:10:4.23:4,0,302	0/1:19,0:7:12.69:13,0,239	0/0:14,0:14:27.09:0,27,775	0/0:19,0:18:51.15:0,51,1202	0/0:14,0:12:33.11:0,33,1056	0/0:21,0:20:50.82:0,51,1451	0/0:21,0:21:51.17:0,51,1131	0/0:21,0:20:54.19:0,54,1590	0/0:19,0:19:48.16:0,48,1201	0/0:7,0:7:18.06:0,18,586	0/0:14,0:14:32.93:0,33,818	0/0:19,0:19:47.45:0,47,1073	1/1:19,0:18:24.08:449,24,0	0/0:21,0:21:51.17:0,51,1421	1/1:2,14:16:18.06:410,18,0	0/0:12,0:11:33.09:0,33,819	0/0:6,0:5:14.88:0,15,426	0/0:14,0:14:33.06:0,33,868	0/0:25,0:24:39.13:0,39,1274	0/0:10,0:9:27.09:0,27,764	0/0:15,0:13:33.11:0,33,861	0/0:21,0:20:36.55:0,37,1093	0/0:13,0:13:32.86:0,33,802	0/0:19,0:18:51.17:0,51,1423	0/0:23,0:23:57.19:0,57,1341	0/0:7,0:5:12.04:0,12,255
chr10	91646802	.	GA	G	1462.20	PASS	AB=0.938;AC=9;AF=0.161;AN=56;BaseQRankSum=8.786;DP=526;FS=15.451;HRun=9;HaplotypeScore=51.5375;InbreedingCoeff=0.9099;MQ=74.20;MQ0=0;MQRankSum=0.751;QD=16.62;ReadPosRankSum=3.266;VQSLOD=2.3108;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:36.02:329,36,0	1/1:2,6:8:15.01:137,15,0	0/1:14,0:13:2.05:2,0,164	0/0:12,1:12:22.29:0,22,228	0/0:21,0:21:60.15:0,60,680	0/0:19,0:19:51.15:0,51,586	0/0:15,0:15:42.12:0,42,485	0/0:32,0:33:78.04:0,78,863	0/0:20,0:20:48.14:0,48,554	0/0:29,0:29:63.18:0,63,718	0/0:21,0:22:63.02:0,63,706	0/0:14,0:14:36.11:0,36,415	0/0:11,0:11:30.06:0,30,332	0/0:16,0:16:48.14:0,48,554	1/1:0,18:18:45.02:412,45,0	0/0:25,0:26:75.06:0,75,845	1/1:2,29:31:81.04:741,81,0	0/0:19,0:19:51.15:0,51,588	0/0:20,0:20:57.13:0,57,636	0/0:23,0:23:60.18:0,60,690	0/0:13,0:13:36.09:0,36,404	0/0:11,0:11:33.09:0,33,372	0/0:15,0:15:45.13:0,45,519	0/0:12,0:12:33.10:0,33,381	0/0:15,0:15:42.12:0,42,485	0/0:29,0:29:75.22:0,75,866	0/0:21,0:22:54.11:0,54,599	0/0:20,0:20:60.18:0,60,692
chr10	91647618	.	AT	A	4893.51	PASS	AB=0.788;AC=44;AF=0.815;AN=54;BaseQRankSum=-5.902;DP=456;FS=33.954;HRun=10;HaplotypeScore=70.2668;InbreedingCoeff=0.4492;MQ=65.00;MQ0=10;MQRankSum=3.864;QD=13.08;ReadPosRankSum=6.127;VQSLOD=2.2902;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,3:20:41.96:358,42,0	1/1:6,3:9:11.96:101,12,0	0/0:25,0:10:6.02:0,6,66	0/0:12,0:8:6.01:0,6,63	0/1:16,16:32:12.22:315,0,12	0/1:9,1:10:10.92:128,0,11	1/1:13,3:15:35.91:307,36,0	1/1:37,2:37:37.03:406,37,0	0/0:11,5:16:0.47:0,0,1	1/1:4,14:18:32.86:284,33,0	1/1:22,0:22:38.05:312,38,0	1/1:3,4:7:2.93:23,3,0	1/1:14,1:15:6.35:94,6,0	1/1:14,0:13:10.09:190,10,0	1/1:5,5:9:20.96:176,21,0	1/1:16,1:17:11.02:146,11,0	1/1:13,4:17:21.90:271,22,0	1/1:17,1:18:30.68:259,31,0	1/1:9,10:19:29.90:252,30,0	1/1:10,1:11:8.56:157,9,0	1/1:9,1:10:3.63:113,4,0	1/1:13,0:11:26.97:226,27,0	1/1:14,1:15:32.38:281,32,0	1/1:15,1:16:21.09:231,21,0	./.	1/1:11,10:21:29.58:237,30,0	0/0:17,0:17:4.09:0,4,17	1/1:5,0:3:3:26,3,0
chr10	91647628	.	TC	T	2766.53	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=1.424;DP=486;FS=2.456;HRun=1;HaplotypeScore=71.9408;InbreedingCoeff=0.4182;MQ=47.95;MQ0=14;MQRankSum=2.540;QD=6.03;ReadPosRankSum=3.521;VQSLOD=0.9844;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:36:49.82:226,50,0	1/1:3,7:10:0.92:36,1,0	0/0:18,0:3:8.69:0,9,61	0/0:9,0:5:11.05:0,11,70	1/1:39,0:39:41.13:252,41,0	1/1:13,0:13:24.34:99,24,0	1/1:16,1:15:32.86:147,33,0	0/1:29,0:28:20.30:55,0,20	1/1:15,0:15:17.41:95,17,0	1/1:17,0:16:15.51:92,16,0	1/1:25,0:25:9.95:129,10,0	1/1:12,0:12:6.84:96,7,0	1/1:12,0:12:18.52:94,19,0	1/1:17,0:16:17.54:91,18,0	1/1:18,0:17:28.09:154,28,0	1/1:14,1:15:33.93:165,34,0	1/1:20,0:20:39.56:158,40,0	1/1:19,1:20:14.23:153,14,0	1/1:12,1:13:7.56:67,8,0	0/1:14,0:13:0.92:69,0,1	1/1:10,0:9:18.97:70,19,0	1/1:13,0:11:29.17:128,29,0	1/1:17,0:17:33.34:158,33,0	1/1:19,1:20:30.12:148,30,0	0/1:14,0:14:1.15:44,0,1	1/1:21,0:21:10.36:90,10,0	1/1:16,0:16:12.76:62,13,0	1/1:5,0:3:3.76:17,4,0
chr10	91648157	.	GAAAGAAAAAA	G	1332.41	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-4.963;DP=421;FS=2.636;HRun=0;HaplotypeScore=114.3369;InbreedingCoeff=-0.2031;MQ=42.82;MQ0=24;MQRankSum=4.023;QD=6.08;ReadPosRankSum=-2.398;VQSLOD=1.7558;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:14:8.99:149,9,0	1/1:4,0:4:3.01:63,3,0	0/0:39,0:8:11.96:0,12,127	0/0:60,0:11:18.04:0,18,256	0/1:17,0:17:28.65:29,0,343	0/0:14,0:13:8.26:0,8,554	0/1:10,0:10:47.65:108,0,48	0/0:24,0:23:34.02:0,34,633	0/1:11,0:11:50.44:50,0,170	0/0:18,0:17:4.31:0,4,282	0/1:14,0:13:55.48:55,0,124	0/1:15,0:13:18.51:19,0,301	0/1:4,0:4:6.31:67,0,6	0/1:6,0:6:14.78:15,0,102	1/1:1,9:9:18.06:507,18,0	0/1:10,0:10:8.68:9,0,404	1/1:3,15:17:14.95:279,15,0	0/1:11,0:11:17.65:18,0,158	0/1:18,0:15:21.35:21,0,233	0/0:12,0:12:3.62:0,4,277	0/1:7,0:7:13.64:14,0,71	0/0:3,0:3:0.07:0,0,90	0/1:8,0:6:29.98:53,0,30	0/0:8,0:7:11.04:0,11,150	0/1:14,0:13:9.76:10,0,312	0/1:16,0:15:23.10:23,0,263	0/0:24,0:23:2.98:0,3,22	0/1:10,0:7:6.88:7,0,134
chr10	91648158	.	AAAG	A	3133.09	PASS	AB=0.996;AC=50;AF=0.893;AN=56;BaseQRankSum=-2.614;DP=425;FS=2.860;HRun=0;HaplotypeScore=73.4162;InbreedingCoeff=0.3304;MQ=42.59;MQ0=25;MQRankSum=1.991;QD=8.14;ReadPosRankSum=0.066;VQSLOD=2.7792;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:13:8.96:84,9,0	1/1:0,4:4:3.01:45,3,0	0/0:38,0:8:6.58:0,7,65	0/1:58,1:11:5.79:6,0,41	1/1:16,0:16:33.13:169,33,0	1/1:14,0:13:23.10:159,23,0	1/1:10,0:10:21.09:171,21,0	1/1:26,0:25:6.75:128,7,0	1/1:12,0:12:30.84:209,31,0	1/1:19,0:18:33.47:231,33,0	1/1:15,0:13:31.15:221,31,0	1/1:15,0:13:19.72:114,20,0	1/1:4,0:4:10.56:83,11,0	0/1:6,0:6:6.42:56,0,6	1/1:10,0:9:17.98:193,18,0	0/1:10,0:10:9.82:190,0,10	1/1:18,0:17:13.54:141,14,0	1/1:11,0:11:11.89:58,12,0	1/1:18,0:15:32.21:217,32,0	1/1:12,0:12:24.57:166,25,0	1/1:7,0:7:7.23:40,7,0	0/1:3,0:3:0:0,0,33	1/1:8,0:6:14.90:113,15,0	1/1:8,0:7:5.40:34,5,0	1/1:14,0:13:20.78:107,21,0	1/1:16,0:15:28.32:205,28,0	1/1:24,0:23:0.47:1,0,0	1/1:11,0:7:17.81:117,18,0
chr10	91648160	.	AG	A	4048.71	PASS	AB=0.959;AC=49;AF=0.875;AN=56;BaseQRankSum=-3.213;DP=421;FS=0.000;HRun=1;HaplotypeScore=60.3887;InbreedingCoeff=0.3441;MQ=42.11;MQ0=27;MQRankSum=2.183;QD=10.77;ReadPosRankSum=0.977;VQSLOD=1.4438;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:13:8.92:63,9,0	1/1:4,0:4:3:26,3,0	0/0:39,3:8:7.05:0,7,40	0/1:61,2:12:11.03:11,0,66	1/1:16,0:16:41.24:249,41,0	1/1:13,1:13:31.02:204,31,0	1/1:10,0:10:27.29:206,27,0	1/1:25,0:24:52.94:304,53,0	1/1:12,0:12:34.30:254,34,0	1/1:18,0:17:48.26:335,48,0	1/1:15,0:13:35.43:226,35,0	1/1:13,0:11:29.79:195,30,0	1/1:4,0:4:11.97:99,12,0	0/1:6,0:6:2.13:55,0,2	1/1:10,0:9:17.92:138,18,0	0/1:9,1:10:0.73:177,0,1	1/1:18,0:17:13.48:94,13,0	1/1:9,0:9:22.41:134,22,0	1/1:17,0:13:38.39:274,38,0	1/1:12,0:12:30.34:177,30,0	1/1:7,1:8:12.96:90,13,0	0/0:2,0:2:0.02:0,0,25	1/1:6,0:5:14.91:115,15,0	1/1:7,0:6:8.86:62,9,0	1/1:14,0:13:27.80:170,28,0	1/1:15,0:14:36.13:244,36,0	1/1:1,23:23:2.98:21,3,0	1/1:12,0:7:19.37:125,19,0
chr10	91648449	.	ATCT	A	84.35	PASS	AB=0.970;AC=18;AF=0.321;AN=56;BaseQRankSum=9.951;DP=365;FS=1.252;HRun=0;HaplotypeScore=74.4954;InbreedingCoeff=-0.1857;MQ=58.69;MQ0=3;MQRankSum=-8.562;QD=0.39;ReadPosRankSum=2.056;VQSLOD=1.3793;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:36.65:0,37,514	0/0:5,0:5:11.94:0,12,140	0/1:23,0:5:10.58:11,0,19	0/0:13,0:4:2.04:0,2,6	0/1:14,0:14:3.81:4,0,129	0/1:14,0:14:3.56:4,0,137	0/1:13,0:12:4.54:5,0,53	0/1:19,1:20:19.23:19,0,261	0/1:8,0:8:21.25:21,0,49	0/1:17,0:16:16.17:16,0,158	0/0:10,0:10:0.73:0,1,110	0/0:11,0:11:6.52:0,7,90	0/0:6,0:5:6.59:0,7,45	0/0:9,0:9:21.12:0,21,160	0/0:16,0:16:39.53:0,40,539	0/1:11,0:12:37.32:49,0,37	0/0:14,0:13:31.54:0,32,328	1/1:4,0:3:0.47:1,0,0	0/0:14,0:14:27.64:0,28,249	0/0:22,0:22:30.93:0,31,333	0/0:9,0:9:9.92:0,10,80	0/1:16,0:16:18.05:18,0,166	0/1:8,0:8:4.96:5,0,38	0/1:7,1:8:9.16:9,0,33	0/1:10,1:11:17.96:18,0,62	0/1:19,1:20:4.38:4,0,245	0/1:18,0:18:11.78:12,0,118	1/1:9,0:8:11.22:34,11,0
chr10	91649095	.	A	AAGAGAGAGAG	25918.96	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.593;DP=577;FS=0.000;HRun=0;HaplotypeScore=141.0193;InbreedingCoeff=0.8651;MQ=65.89;MQ0=18;MQRankSum=-4.863;QD=54.91;ReadPosRankSum=3.188;VQSLOD=4.3965;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:24:18.06:761,18,0	1/1:10,0:15:21.06:741,21,0	0/0:51,0:23:20.35:0,20,220	0/0:53,0:28:37.69:0,38,451	1/1:14,9:26:33.11:1383,33,0	1/1:6,0:15:21.07:835,21,0	1/1:8,9:16:12.04:591,12,0	1/1:19,0:17:21.06:598,21,0	1/1:6,11:18:33.11:1553,33,0	1/1:17,0:17:39.13:1036,39,0	1/1:6,14:23:42.14:2008,42,0	1/1:3,6:11:15.05:746,15,0	1/1:3,11:15:15.05:732,15,0	1/1:6,8:16:9.03:443,9,0	1/1:12,0:22:18.06:774,18,0	1/1:2,13:16:27.56:1367,28,0	1/1:16,0:24:27.09:1088,27,0	1/1:9,0:9:21.07:341,21,0	1/1:3,6:10:26.96:924,27,0	1/1:13,9:25:21.05:908,21,0	1/1:6,3:9:9.03:453,9,0	1/1:5,7:11:12.04:591,12,0	1/1:7,12:21:30.10:1516,30,0	1/1:8,0:8:12.04:293,12,0	1/1:11,12:25:48.16:2302,48,0	1/1:11,10:22:51.16:1906,51,0	1/1:9,14:25:27.09:1365,27,0	1/1:5,4:9:18.06:664,18,0
chr10	91649594	.	A	AT	4045.65	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-13.484;DP=687;FS=0.855;HRun=1;HaplotypeScore=62.9399;InbreedingCoeff=0.9957;MQ=72.03;MQ0=0;MQRankSum=-1.322;QD=40.87;ReadPosRankSum=2.151;VQSLOD=4.2679;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:81.27:1213,81,0	1/1:1,7:8:21.07:315,21,0	0/0:22,0:22:60.18:0,60,750	0/0:20,0:20:22.06:0,22,581	0/0:26,0:26:69.20:0,69,881	0/0:37,0:37:99:0,105,1344	0/0:26,0:26:78.21:0,78,969	0/0:36,0:36:99:0,105,1335	0/0:30,0:30:90.29:0,90,1168	0/0:23,0:23:66.21:0,66,847	0/0:16,0:16:48.16:0,48,623	0/0:26,0:26:78.23:0,78,984	0/0:22,0:22:66.21:0,66,854	0/0:22,0:22:66.20:0,66,843	1/1:1,37:38:99:1619,108,0	0/0:21,0:21:63.20:0,63,818	1/1:0,24:24:60.20:899,60,0	0/0:9,0:9:21.03:0,21,254	0/0:29,0:29:84.27:0,84,1091	0/0:24,0:24:66.20:0,66,843	0/0:42,0:42:99:0,120,1510	0/0:21,0:21:60.18:0,60,764	0/0:21,0:21:54.11:0,54,668	0/0:25,0:25:69.20:0,69,880	0/0:17,0:17:48.13:0,48,607	0/0:35,0:35:99:0,105,1338	0/0:31,0:31:90.29:0,90,1165	0/0:7,0:7:21.07:0,21,273
chr10	91650549	.	TTC	T	2129.61	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.353;DP=419;FS=5.239;HRun=0;HaplotypeScore=54.3459;InbreedingCoeff=0.9812;MQ=80.50;MQ0=1;MQRankSum=-1.654;QD=32.76;ReadPosRankSum=2.711;VQSLOD=5.5325;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:63.21:888,63,0	1/1:0,3:3:9.03:127,9,0	0/0:11,0:11:30.10:0,30,526	0/0:11,0:11:27.09:0,27,472	0/0:10,0:10:30.10:0,30,536	0/0:31,0:31:90.29:0,90,1577	0/0:14,0:14:42.11:0,42,693	0/0:31,0:31:90.25:0,90,1485	0/0:12,0:12:36.12:0,36,645	0/0:13,0:13:36.11:0,36,615	0/0:10,0:10:30.03:0,30,485	0/0:14,0:14:39.11:0,39,626	0/0:8,0:8:24.08:0,24,430	0/0:10,0:10:30.10:0,30,537	1/1:0,17:17:45.15:636,45,0	0/0:10,0:10:27.09:0,27,484	1/1:1,18:18:45.15:634,45,0	0/0:11,0:11:27.07:0,27,454	0/0:14,0:14:33.10:0,33,558	0/0:19,0:19:57.15:0,57,985	0/0:12,0:12:36.07:0,36,555	0/0:11,0:11:30.09:0,30,507	0/0:20,0:20:57.06:0,57,922	0/0:20,0:20:51.16:0,51,874	0/0:14,0:14:39.13:0,39,688	0/0:19,0:19:57.19:0,57,994	0/0:16,0:16:48.16:0,48,856	0/0:13,0:13:39.13:0,39,698
chr10	91650826	.	G	GA	2540.46	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=4.851;DP=518;FS=2.052;HRun=9;HaplotypeScore=59.0157;InbreedingCoeff=0.7191;MQ=58.20;MQ0=30;MQRankSum=2.845;QD=20.65;ReadPosRankSum=3.210;VQSLOD=4.3675;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,36:38:90.11:994,90,0	1/1:2,3:5:9.02:100,9,0	0/1:6,0:6:14.65:15,0,65	0/0:10,0:5:12:0,12,104	0/0:15,0:13:35.99:0,36,312	0/0:16,0:14:26.98:0,27,234	0/0:20,0:19:41.97:0,42,364	0/0:36,0:35:94.51:0,95,808	0/0:14,0:13:26.99:0,27,234	0/0:17,0:15:32.97:0,33,286	0/0:17,0:16:41.96:0,42,358	0/0:19,0:18:32.99:0,33,287	0/0:10,0:8:18:0,18,156	0/0:10,0:9:17.99:0,18,156	1/1:0,14:14:27.05:297,27,0	0/0:14,0:12:29.99:0,30,260	1/1:5,42:46:97.37:1288,97,0	0/0:26,1:23:26.83:0,27,461	0/0:24,1:22:5.78:0,6,279	0/0:22,0:20:20.79:0,21,409	0/0:18,0:16:47.97:0,48,412	0/1:11,0:9:11:11,0,135	0/0:13,0:12:32.87:0,33,286	0/0:27,0:24:56.97:0,57,494	0/0:14,0:15:38.03:0,38,319	0/0:18,0:17:44.99:0,45,391	0/0:19,0:17:38.99:0,39,339	0/0:13,0:13:29.59:0,30,259
chr10	91651168	.	TA	T	8692.59	PASS	AB=0.938;AC=45;AF=0.804;AN=56;BaseQRankSum=8.499;DP=557;FS=0.000;HRun=11;HaplotypeScore=60.5804;InbreedingCoeff=0.8439;MQ=71.92;MQ0=0;MQRankSum=-1.044;QD=18.61;ReadPosRankSum=-0.091;VQSLOD=5.6477;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:32:65.50:0,66,888	0/0:11,0:11:33.08:0,33,352	0/1:14,1:14:9.90:10,0,106	0/0:13,0:11:1.97:0,2,86	1/1:2,29:31:80.90:665,81,0	1/1:2,20:23:49.98:400,50,0	1/1:2,15:18:37.99:301,38,0	1/1:7,25:32:74.84:606,75,0	1/1:2,9:11:26.97:222,27,0	1/1:3,26:29:74.85:607,75,0	1/1:2,13:16:31.98:252,32,0	1/1:3,9:12:14.98:123,15,0	1/1:0,16:16:38.96:320,39,0	1/1:0,14:14:41.95:345,42,0	0/0:16,0:16:39.09:0,39,410	1/1:2,17:20:20.93:360,21,0	0/0:17,0:17:41.97:0,42,431	1/1:0,10:10:26.97:222,27,0	1/1:3,21:26:41.92:468,42,0	1/1:7,31:38:86.64:692,87,0	1/1:8,7:17:31.60:233,32,0	1/1:0,15:16:46.82:360,47,0	1/1:0,20:20:56.94:468,57,0	1/1:0,8:8:17.98:148,18,0	1/1:1,16:17:41.95:345,42,0	1/1:4,29:33:83.83:680,84,0	1/1:5,28:33:70.95:572,71,0	1/1:0,12:12:35.96:296,36,0
chr10	91651687	.	GA	G	5264.60	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=-6.301;DP=326;FS=2.168;HRun=1;HaplotypeScore=57.2856;InbreedingCoeff=0.5102;MQ=96.82;MQ0=0;MQRankSum=-6.540;QD=19.07;ReadPosRankSum=-2.642;VQSLOD=4.3070;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:36.03:474,36,0	1/1:0,9:9:18.06:250,18,0	0/0:28,0:24:62.84:0,63,709	0/0:22,0:22:37.12:0,37,548	0/1:9,0:9:3.32:81,0,3	1/1:0,6:6:12.04:165,12,0	1/1:9,10:19:52.40:579,52,0	1/1:11,0:11:25.64:179,26,0	0/1:10,0:10:0.82:46,0,1	1/1:7,0:7:10.71:84,11,0	1/1:7,0:7:1.34:97,1,0	1/1:9,3:12:25.68:259,26,0	1/1:10,0:10:17.48:79,17,0	1/1:13,1:14:13.96:158,14,0	1/1:0,15:15:38.94:540,39,0	1/1:2,15:17:22.50:312,23,0	1/1:0,15:15:39.13:540,39,0	1/1:7,7:14:31.66:362,32,0	1/1:8,0:7:2.01:40,2,0	1/1:5,0:5:4.77:30,5,0	1/1:11,1:11:17.41:134,17,0	1/1:8,0:8:14.48:109,14,0	1/1:6,0:6:12:104,12,0	1/1:10,0:10:10.73:59,11,0	1/1:12,0:12:20.81:153,21,0	1/1:10,2:12:26.29:261,26,0	1/1:10,0:10:10.15:126,10,0	1/1:2,0:2:5.94:43,6,0
chr10	91651772	.	AT	A	1864.24	PASS	AB=0.780;AC=41;AF=0.732;AN=56;BaseQRankSum=1.750;DP=378;FS=5.228;HRun=15;HaplotypeScore=71.7691;InbreedingCoeff=0.2055;MQ=68.31;MQ0=3;MQRankSum=0.704;QD=5.75;ReadPosRankSum=1.307;VQSLOD=2.7261;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:31:43.81:0,44,465	0/0:3,0:3:6:0,6,53	0/0:20,0:13:12.78:0,13,74	0/1:15,1:12:4.24:4,0,23	1/1:6,8:14:17.16:115,17,0	0/1:3,7:10:25.76:108,0,26	0/1:6,8:15:6.59:82,0,7	1/1:6,5:11:13.75:83,14,0	1/1:3,7:9:11.80:77,12,0	1/1:5,1:11:9.40:28,9,0	1/1:1,0:8:10.18:29,10,0	1/1:6,3:9:17.59:109,18,0	1/1:1,1:14:23.31:77,23,0	0/1:6,6:13:9.86:62,0,10	0/1:19,1:21:2.74:3,0,207	1/1:3,13:18:41.66:258,42,0	0/1:16,5:22:39.50:40,0,300	1/1:1,14:15:38.43:250,38,0	0/1:9,3:15:8.53:55,0,9	1/1:1,4:7:15.90:89,16,0	0/1:8,3:9:14.09:14,0,41	1/1:2,0:10:16.28:47,16,0	1/1:3,0:10:10.12:29,10,0	1/1:3,0:7:11.08:43,11,0	1/1:4,1:18:27.37:90,27,0	1/1:7,6:15:1.34:120,1,0	1/1:3,11:17:35.59:210,36,0	0/1:4,0:4:13.17:13,0,13
chr10	91652086	.	T	TG	3503.77	PASS	AB=1.000;AC=52;AF=0.929;AN=56;BaseQRankSum=-2.370;DP=380;FS=0.000;HRun=0;HaplotypeScore=148.5357;InbreedingCoeff=0.2498;MQ=54.83;MQ0=0;MQRankSum=0.788;QD=9.24;ReadPosRankSum=-2.885;VQSLOD=2.7862;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:24.09:198,24,0	0/0:1,0:1:0:0,0,0	0/1:7,0:6:12.42:12,0,49	0/1:5,0:5:3.31:3,0,79	1/1:16,1:17:10.57:78,11,0	1/1:14,0:14:17.84:88,18,0	1/1:16,1:17:17.31:123,17,0	1/1:10,0:10:18.42:70,18,0	1/1:16,1:17:25.38:164,25,0	1/1:16,0:16:31.76:138,32,0	1/1:9,0:9:7.30:64,7,0	1/1:11,0:11:15.18:120,15,0	1/1:12,2:14:15.11:142,15,0	1/1:18,0:18:13.67:124,14,0	1/1:9,0:9:7.33:66,7,0	1/1:13,0:13:8.08:19,8,0	1/1:14,0:14:15.51:158,16,0	1/1:5,0:5:6.37:34,6,0	1/1:15,1:15:35.20:231,35,0	1/1:25,0:25:36.62:294,37,0	1/1:14,3:17:25.42:300,25,0	1/1:6,1:7:13.17:116,13,0	1/1:15,0:15:21.88:151,22,0	1/1:21,0:21:6.82:123,7,0	1/1:10,1:11:10.90:87,11,0	1/1:17,1:18:36.27:205,36,0	1/1:13,2:14:17.94:134,18,0	1/1:12,0:12:26.93:262,27,0
chr10	91653352	.	A	ACG	3896.36	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-12.542;DP=599;FS=18.993;HRun=0;HaplotypeScore=68.0781;InbreedingCoeff=0.9844;MQ=62.97;MQ0=2;MQRankSum=2.938;QD=29.74;ReadPosRankSum=2.466;VQSLOD=3.7679;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,50:58:58.69:1455,59,0	1/1:0,10:10:30.10:530,30,0	0/0:18,0:13:14.43:0,14,255	0/0:9,0:6:12.04:0,12,161	0/0:17,0:17:25.89:0,26,548	0/0:19,0:19:48.16:0,48,659	0/0:19,0:19:48.10:0,48,590	0/0:26,0:26:69.17:0,69,838	0/0:28,0:28:75.19:0,75,963	0/0:27,0:27:69.20:0,69,883	0/0:18,0:18:51.08:0,51,629	0/0:14,0:14:39.11:0,39,507	0/0:15,0:15:42.13:0,42,559	0/0:10,0:10:27.06:0,27,338	1/1:2,20:21:36.12:637,36,0	0/0:18,0:18:51.14:0,51,667	1/1:2,38:40:72.25:1274,72,0	0/0:18,0:18:48.16:0,48,659	0/0:16,0:16:42.13:0,42,562	0/0:18,0:18:39.04:0,39,463	0/0:51,0:51:99:0,121,1595	0/0:15,0:15:42.10:0,42,527	0/0:15,0:15:36.08:0,36,444	0/0:25,0:25:60.13:0,60,769	0/0:17,0:17:39.12:0,39,519	0/0:21,0:21:51.12:0,51,624	0/0:25,0:25:75.16:0,75,941	0/0:9,0:9:21.04:0,21,254
chr10	91653769	.	GAAAA	G	1659.94	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.532;DP=439;FS=6.955;HRun=16;HaplotypeScore=80.3727;InbreedingCoeff=0.8235;MQ=67.25;MQ0=1;MQRankSum=5.993;QD=22.43;ReadPosRankSum=6.949;VQSLOD=2.4139;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,16:26:41.90:555,42,0	1/1:1,2:4:8.99:102,9,0	0/0:18,0:14:29:0,29,355	0/0:18,0:12:3.41:0,3,99	0/0:29,0:28:51.17:0,51,840	0/0:15,0:15:33.09:0,33,604	0/0:13,0:13:24.08:0,24,446	0/0:33,0:31:66.22:0,66,1270	0/0:11,0:11:27.09:0,27,474	0/0:22,0:22:51.17:0,51,969	0/0:19,0:19:42:0,42,510	0/0:10,0:10:18.06:0,18,311	0/0:11,0:11:18.05:0,18,325	0/0:11,0:11:21.07:0,21,341	1/1:5,6:12:23.97:299,24,0	0/0:12,0:12:24.08:0,24,450	1/1:10,20:32:57:857,57,0	0/0:7,0:7:9.03:0,9,182	0/0:17,0:15:36.12:0,36,705	0/0:20,0:20:45.15:0,45,821	0/0:9,0:9:17.27:0,17,280	0/0:3,0:3:3.01:0,3,38	0/0:7,0:7:14.26:0,14,238	0/0:4,0:4:3.48:0,3,39	0/0:27,0:27:63.21:0,63,1113	0/0:18,0:18:36.12:0,36,676	0/0:25,0:25:57.14:0,57,994	0/0:4,0:5:12.04:0,12,237
chr10	91653844	.	T	TTTTC	4109.38	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-7.840;DP=517;FS=0.000;HRun=0;HaplotypeScore=88.5312;InbreedingCoeff=0.9776;MQ=65.51;MQ0=10;MQRankSum=3.593;QD=43.72;ReadPosRankSum=2.784;VQSLOD=4.0910;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,20:29:60.50:1267,60,0	1/1:1,5:6:14.98:312,15,0	0/0:51,0:21:29.42:0,29,341	0/0:41,0:14:17.88:0,18,191	0/0:25,0:25:69.02:0,69,1001	0/0:13,0:13:33.10:0,33,535	0/0:14,0:14:30.04:0,30,447	0/0:19,0:19:45.12:0,45,654	0/0:14,0:14:39.09:0,39,646	0/0:25,0:25:60.15:0,60,948	0/0:19,0:19:45.14:0,45,734	0/0:9,0:9:25.90:0,26,422	0/0:7,0:7:18.03:0,18,282	0/0:10,0:10:27.09:0,27,469	1/1:7,16:26:40.05:940,40,0	0/0:12,0:12:33.08:0,33,542	1/1:7,24:33:69.15:1591,69,0	0/0:25,0:25:75.21:0,75,1231	0/0:21,0:20:51.16:0,51,855	0/0:12,0:12:33.01:0,33,467	0/0:8,0:7:18.06:0,18,311	0/0:7,0:7:21.07:0,21,354	0/0:12,0:12:27.05:0,27,437	0/0:18,0:18:54.17:0,54,893	0/0:19,0:19:45.02:0,45,671	0/0:16,0:16:45.05:0,45,658	0/0:22,0:22:60.11:0,60,950	0/0:4,0:4:12.01:0,12,177
chr10	91655745	.	TAAATAAATAAAAA	T	4593.08	PASS	AB=1.000;AC=38;AF=0.864;AN=44;BaseQRankSum=2.036;DP=185;FS=0.000;HRun=0;HaplotypeScore=60.5064;InbreedingCoeff=0.1963;MQ=49.34;MQ0=20;MQRankSum=4.231;QD=28.89;ReadPosRankSum=0.691;VQSLOD=3.1058;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:7,0:1:3.01:0,3,66	0/0:4,0:1:3.01:0,3,30	1/1:7,0:7:21.07:334,21,0	1/1:8,0:8:5.95:41,6,0	1/1:1,0:1:3.01:50,3,0	0/1:33,0:29:99:984,0,115	1/1:7,0:7:5.95:41,6,0	1/1:1,3:3:9.03:207,9,0	1/1:10,0:10:30.03:497,30,0	1/1:4,0:3:9.03:149,9,0	1/1:2,0:2:6.02:100,6,0	1/1:5,0:5:15.05:248,15,0	./.	1/1:5,0:5:7.79:49,8,0	./.	0/1:12,0:9:35.34:166,0,35	1/1:22,0:15:42.01:639,42,0	1/1:4,0:4:12.03:172,12,0	1/1:2,0:2:1.73:48,2,0	./.	1/1:2,0:2:5.98:70,6,0	1/1:2,0:1:3.01:44,3,0	1/1:1,9:10:12.04:395,12,0	1/1:11,0:11:22.85:298,23,0	1/1:8,0:8:8.93:62,9,0	./.
chr10	91655749	.	TAAATAAAAA	T	6075.68	PASS	AC=42;AF=0.913;AN=46;BaseQRankSum=0.339;DP=194;FS=2.872;HRun=0;HaplotypeScore=47.5042;InbreedingCoeff=0.4493;MQ=57.29;MQ0=17;MQRankSum=0.711;QD=36.60;ReadPosRankSum=1.082;VQSLOD=3.9601;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:9,0:3:9.03:0,9,193	0/0:4,0:1:3.01:0,3,30	1/1:8,0:8:24.08:383,24,0	1/1:0,8:8:6.02:182,6,0	1/1:1,0:1:3.01:50,3,0	1/1:32,0:29:69.11:1112,69,0	1/1:0,7:7:6.02:182,6,0	1/1:3,0:3:9.03:160,9,0	1/1:11,0:11:30.10:493,30,0	1/1:5,0:4:12.04:199,12,0	1/1:2,0:2:6.02:100,6,0	1/1:6,0:6:18.06:297,18,0	./.	1/1:0,7:7:9.03:179,9,0	./.	1/1:9,0:8:17.11:252,17,0	1/1:8,16:17:48.07:761,48,0	1/1:6,0:6:18.05:272,18,0	1/1:2,0:2:6.02:95,6,0	1/1:1,0:1:3.01:44,3,0	1/1:2,0:2:3.01:50,3,0	1/1:4,0:3:9.03:143,9,0	1/1:9,0:9:12.04:256,12,0	1/1:0,12:12:36.08:593,36,0	1/1:1,6:7:9.03:273,9,0	./.
chr10	91655753	.	TA	T	2509.61	PASS	AC=42;AF=0.913;AN=46;BaseQRankSum=1.702;DP=190;FS=6.720;HRun=10;HaplotypeScore=36.1427;InbreedingCoeff=0.4631;MQ=60.37;MQ0=13;MQRankSum=-0.762;QD=15.40;ReadPosRankSum=2.431;VQSLOD=3.1697;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:11,0:5:12.03:0,12,133	0/0:4,0:1:2.88:0,3,15	1/1:0,8:8:23.95:194,24,0	1/1:8,0:8:5.19:21,5,0	1/1:0,1:1:2.99:24,3,0	1/1:2,0:25:68.91:575,69,0	1/1:7,0:7:5.27:22,5,0	1/1:3,0:3:8.99:76,9,0	1/1:0,11:11:32.93:263,33,0	1/1:0,5:5:11.97:94,12,0	1/1:0,3:3:5.99:47,6,0	1/1:0,8:8:17.96:143,18,0	./.	1/1:7,0:7:8.22:59,8,0	./.	1/1:3,8:10:17.96:146,18,0	1/1:22,0:17:38.12:305,38,0	1/1:0,6:6:17.97:145,18,0	1/1:0,2:2:5.99:48,6,0	1/1:0,2:2:5.99:49,6,0	1/1:0,1:1:2.99:24,3,0	1/1:1,4:4:8.98:73,9,0	1/1:9,0:9:11.12:74,11,0	1/1:12,0:12:26.14:205,26,0	1/1:6,0:6:7.62:32,8,0	./.
chr10	91656264	.	G	GAA	4449.33	PASS	AB=0.700;AC=44;AF=0.815;AN=54;BaseQRankSum=-1.527;DP=483;FS=0.000;HRun=14;HaplotypeScore=76.2256;InbreedingCoeff=0.3001;MQ=42.04;MQ0=52;MQRankSum=0.570;QD=10.85;ReadPosRankSum=-0.939;VQSLOD=3.3512;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,1:25:6.25:87,0,6	0/0:5,0:5:0.85:0,1,13	0/0:25,0:6:5.16:0,5,23	0/0:37,0:9:4.31:0,4,30	1/1:11,6:18:8.74:158,9,0	1/1:9,5:14:22.37:320,22,0	1/1:4,7:9:9.02:118,9,0	1/1:15,1:15:28.39:274,28,0	0/1:7,5:12:2.60:182,0,3	1/1:9,2:11:11.40:124,11,0	1/1:6,8:15:23.28:220,23,0	1/1:8,6:13:1.98:288,2,0	1/1:5,3:9:16.62:159,17,0	1/1:3,2:7:11.40:117,11,0	1/1:18,0:18:19:148,19,0	1/1:7,10:17:18.03:210,18,0	1/1:31,0:31:16.65:211,17,0	1/1:11,0:16:7.75:54,8,0	1/1:9,6:16:23.56:229,24,0	0/1:6,6:12:7.68:125,0,8	1/1:3,2:4:5.97:58,6,0	./.	1/1:11,5:16:19.10:158,19,0	1/1:13,7:15:9.03:118,9,0	1/1:4,9:14:18.06:232,18,0	0/1:14,1:15:11.08:235,0,11	1/1:14,4:17:32.80:354,33,0	1/1:12,8:17:23.43:272,23,0
chr10	91656959	.	CTT	C	3054.81	PASS	AB=0.702;AC=48;AF=0.857;AN=56;BaseQRankSum=-4.087;DP=479;FS=4.235;HRun=17;HaplotypeScore=75.5975;InbreedingCoeff=0.0309;MQ=85.18;MQ0=2;MQRankSum=-2.418;QD=7.02;ReadPosRankSum=3.141;VQSLOD=0.2140;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:18.07:53,18,0	1/1:8,0:8:10.36:33,10,0	0/0:42,0:22:5.52:0,6,203	0/1:30,0:19:22.54:23,0,82	1/1:8,12:24:11.08:158,11,0	1/1:4,13:20:20.55:201,21,0	1/1:3,3:6:5.90:47,6,0	1/1:10,8:19:25.51:202,26,0	0/1:6,6:14:25.12:42,0,25	1/1:9,10:20:26.23:238,26,0	1/1:6,10:18:17.84:184,18,0	1/1:4,7:11:4.18:44,4,0	1/1:5,5:11:14.66:107,15,0	0/1:6,4:15:25.71:84,0,26	1/1:19,0:19:29.97:106,30,0	1/1:4,10:18:5.10:152,5,0	1/1:16,0:16:17.85:69,18,0	1/1:5,14:20:11.53:134,12,0	1/1:9,6:17:14.38:142,14,0	0/1:7,11:19:12.37:125,0,12	0/1:9,5:14:11.71:59,0,12	1/1:5,4:10:10.13:117,10,0	1/1:5,7:12:4.79:45,5,0	0/1:2,3:6:0.37:27,0,0	1/1:3,16:18:23.12:228,23,0	1/1:4,11:17:35.21:258,35,0	1/1:9,11:23:15.26:226,15,0	1/1:0,6:7:11.72:83,12,0
chr10	91656974	.	TTTA	T	1417.25	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=2.035;DP=510;FS=24.715;HRun=0;HaplotypeScore=93.5115;InbreedingCoeff=0.7051;MQ=81.60;MQ0=3;MQRankSum=-2.880;QD=11.34;ReadPosRankSum=1.819;VQSLOD=1.3150;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:27.09:379,27,0	1/1:0,9:9:20.50:243,20,0	0/0:49,0:23:27.49:0,27,525	0/1:37,0:21:23.54:24,0,230	0/0:22,0:22:32.72:0,33,355	0/0:22,0:22:29.40:0,29,280	0/0:6,0:6:14.46:0,14,98	0/0:17,0:17:26.24:0,26,234	0/0:14,0:14:15.44:0,15,201	0/0:20,0:20:45.05:0,45,345	0/0:24,0:24:64.86:0,65,444	0/0:10,0:10:12.74:0,13,83	0/0:13,0:13:13.18:0,13,185	0/0:15,0:15:24.51:0,25,262	1/1:3,19:22:42.08:523,42,0	0/0:22,0:22:50.21:0,50,402	1/1:9,7:16:39.32:395,39,0	0/0:16,0:16:18.67:0,19,134	0/0:15,0:15:12.24:0,12,253	0/0:24,0:24:59.78:0,60,499	0/0:8,0:8:20.26:0,20,178	0/0:14,0:14:32.78:0,33,246	0/0:13,0:13:27.33:0,27,207	0/0:8,0:8:6.83:0,7,91	0/0:20,0:18:39.16:0,39,225	0/1:23,0:23:21.51:22,0,264	0/0:22,0:22:32.80:0,33,306	0/0:10,0:10:9.91:0,10,106
chr10	91656975	.	TTA	T	870.67	PASS	AB=0.974;AC=9;AF=0.161;AN=56;BaseQRankSum=4.193;DP=509;FS=49.368;HRun=0;HaplotypeScore=85.4725;InbreedingCoeff=0.7572;MQ=80.34;MQ0=3;MQRankSum=-2.979;QD=8.71;ReadPosRankSum=-0.350;VQSLOD=1.3441;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:26.94:218,27,0	1/1:9,0:9:20.67:154,21,0	0/0:47,0:22:36.39:0,36,401	0/1:36,1:20:10.44:10,0,178	0/0:23,0:23:22.32:0,22,274	0/0:22,0:22:25.37:0,25,193	0/0:6,0:6:7.20:0,7,71	0/0:15,1:16:7.99:0,8,124	0/0:16,0:16:23.81:0,24,183	0/0:20,0:20:17.32:0,17,226	0/0:24,0:24:23.84:0,24,309	0/0:10,0:10:11.03:0,11,87	0/0:13,0:13:13.53:0,14,123	0/0:15,0:15:4.92:0,5,139	1/1:22,0:22:41.88:333,42,0	0/0:22,0:22:41.01:0,41,278	1/1:13,2:15:40.36:317,40,0	0/0:16,0:16:12.22:0,12,74	0/0:15,0:15:28.55:0,29,215	0/0:24,0:24:46.19:0,46,364	0/0:9,0:9:16.19:0,16,131	0/0:14,0:14:29.92:0,30,209	0/0:13,0:13:24.85:0,25,196	0/0:9,0:9:15.10:0,15,107	0/0:20,0:18:15.29:0,15,103	0/0:23,0:23:22.17:0,22,272	0/0:22,0:22:30.20:0,30,222	0/0:10,0:10:5.54:0,6,68
chr10	91657106	.	CA	C	2514.81	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.811;DP=495;FS=2.164;HRun=3;HaplotypeScore=46.3076;InbreedingCoeff=0.9988;MQ=80.06;MQ0=0;MQRankSum=0.050;QD=33.09;ReadPosRankSum=3.127;VQSLOD=3.7503;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:72.23:890,72,0	1/1:0,9:9:27.08:335,27,0	0/0:15,0:15:41.16:0,41,555	0/0:11,0:11:33.02:0,33,435	0/0:21,0:21:60.19:0,60,845	0/0:24,0:24:63.20:0,63,890	0/0:10,0:10:27.08:0,27,372	0/0:29,0:29:84.26:0,84,1176	0/0:15,0:15:45.15:0,45,647	0/0:30,0:30:87.29:0,87,1238	0/0:16,0:16:45.15:0,45,638	0/0:14,0:14:42.14:0,42,604	0/0:10,0:10:30.09:0,30,412	0/0:11,0:11:33.10:0,33,458	1/1:0,29:29:84.26:1042,84,0	0/0:26,0:26:78.26:0,78,1123	1/1:0,12:12:33.10:409,33,0	0/0:12,0:12:36.10:0,36,493	0/0:19,0:19:57.19:0,57,820	0/0:22,0:22:63.17:0,63,883	0/0:15,0:15:42.14:0,42,604	0/0:10,0:10:30.10:0,30,421	0/0:18,0:18:54.17:0,54,759	0/0:13,0:13:39.13:0,39,562	0/0:12,0:12:36.12:0,36,518	0/0:22,0:22:63.20:0,63,876	0/0:29,0:29:87.28:0,87,1234	0/0:15,0:15:42.14:0,42,604
chr10	91657346	.	AT	A	5528.29	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-2.600;DP=383;FS=8.050;HRun=7;HaplotypeScore=50.2609;InbreedingCoeff=0.9411;MQ=60.27;MQ0=1;MQRankSum=1.185;QD=25.24;ReadPosRankSum=-0.097;VQSLOD=4.7857;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:86.87:0,87,1021	0/0:9,0:9:24.05:0,24,286	0/0:6,0:4:9.02:0,9,96	0/0:7,0:6:13.59:0,14,150	1/1:2,18:20:48.10:489,48,0	1/1:1,11:12:30.07:306,30,0	1/1:0,7:7:21.05:213,21,0	1/1:6,25:31:72.14:727,72,0	1/1:0,7:7:12.03:122,12,0	0/0:25,0:25:63.20:0,63,793	0/0:14,0:14:39.12:0,39,480	1/1:0,9:9:27.06:275,27,0	0/0:9,0:9:21.07:0,21,264	1/1:0,8:8:21.05:214,21,0	0/0:17,0:17:41.99:0,42,515	1/1:1,13:14:36.08:367,36,0	0/0:23,0:22:54.16:0,54,664	1/1:3,14:17:39.09:398,39,0	1/1:2,9:10:27.06:276,27,0	1/1:2,13:15:36.08:367,36,0	1/1:1,11:12:24.05:245,24,0	0/0:1,0:1:3.01:0,3,38	0/0:6,0:6:15.05:0,15,188	0/0:2,0:2:6.02:0,6,75	0/0:16,0:16:48.15:0,48,602	1/1:2,25:27:75.17:765,75,0	1/1:2,19:21:51.11:520,51,0	1/1:0,8:8:24.05:245,24,0
chr10	91657374	.	GAT	G	1926.17	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=4.205;DP=366;FS=0.000;HRun=0;HaplotypeScore=62.7637;InbreedingCoeff=0.9339;MQ=62.94;MQ0=0;MQRankSum=2.190;QD=24.08;ReadPosRankSum=4.313;VQSLOD=3.5668;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,25:32:66.21:848,66,0	1/1:2,6:8:18.06:231,18,0	./.	0/0:5,0:4:9.03:0,9,146	0/0:17,0:17:39.12:0,39,630	0/0:12,0:12:30.10:0,30,506	0/0:8,0:8:21.07:0,21,353	0/0:25,0:25:60.18:0,60,940	0/0:6,0:6:18.06:0,18,304	0/0:27,0:27:72.24:0,72,1190	0/0:16,0:16:36.12:0,36,604	0/0:10,0:10:27.08:0,27,427	0/0:7,0:7:18.06:0,18,300	0/0:8,0:8:18.05:0,18,278	1/1:0,16:16:36.12:463,36,0	0/0:16,0:16:39.13:0,39,649	1/1:2,22:23:42.14:540,42,0	0/0:15,0:15:39.13:0,39,657	0/0:15,0:15:33.09:0,33,506	0/0:15,0:15:33.11:0,33,556	0/0:3,0:3:9.03:0,9,151	./.	0/0:4,0:4:9.03:0,9,152	0/0:4,0:4:12.04:0,12,195	0/0:14,0:14:42.14:0,42,708	0/0:27,0:27:69.24:0,69,1164	0/0:17,0:17:42.11:0,42,645	0/0:13,0:13:33.07:0,33,492
chr10	91657495	.	GACACACACAC	G	2063.50	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=1.860;DP=371;FS=15.990;HRun=0;HaplotypeScore=113.2047;InbreedingCoeff=0.6928;MQ=74.79;MQ0=7;MQRankSum=-2.456;QD=25.48;ReadPosRankSum=2.542;VQSLOD=1.5772;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:25:19.45:0,19,1167	0/0:4,0:6:8.06:0,8,202	0/0:27,0:21:6:0,6,140	0/0:24,0:16:12.04:0,12,369	0/0:5,0:5:6.02:0,6,176	0/0:17,0:17:6:0,6,263	0/0:9,0:9:12.01:0,12,189	0/0:29,0:29:48.16:0,48,1838	0/0:6,0:6:6.02:0,6,213	1/1:7,7:14:21.07:575,21,0	1/1:10,6:18:21.07:592,21,0	0/0:9,0:8:3.01:0,3,130	1/1:3,7:10:12.04:362,12,0	0/0:7,0:7:6.02:0,6,248	0/0:8,0:16:18.06:0,18,744	0/0:14,0:14:21.03:0,21,717	0/0:10,0:26:27.01:0,27,1173	0/0:11,0:14:13.86:0,14,539	0/0:7,0:7:12.04:0,12,461	0/1:7,0:6:0:0,0,0	0/0:10,0:9:3.01:0,3,121	1/1:3,2:5:6.02:181,6,0	1/1:10,2:12:3.01:91,3,0	1/1:5,3:8:2.69:90,3,0	1/1:3,3:7:12.04:341,12,0	0/0:16,0:15:33.11:0,33,1101	0/0:11,0:11:24.08:0,24,830	0/0:9,0:9:9.03:0,9,321
chr10	91657530	.	A	ACACACACACC	6927.08	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-4.554;DP=403;FS=3.586;HRun=0;HaplotypeScore=129.2771;InbreedingCoeff=0.6430;MQ=55.39;MQ0=13;MQRankSum=-2.300;QD=24.31;ReadPosRankSum=-3.311;VQSLOD=3.2857;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:99:117,0,287	0/0:8,0:7:9.46:0,9,76	0/0:14,0:6:7.90:0,8,121	0/0:35,0:18:39.03:0,39,327	1/1:1,3:7:3.01:153,3,0	1/1:18,0:18:44.93:774,45,0	1/1:2,0:13:3.82:22,4,0	1/1:33,0:33:97.02:1447,97,0	1/1:2,0:5:9.03:259,9,0	0/0:15,0:15:39.81:0,40,473	0/0:12,0:12:33:0,33,561	1/1:4,7:10:8.86:383,9,0	0/0:12,0:12:21.02:0,21,348	1/1:5,0:5:14.96:140,15,0	0/1:18,0:18:60.05:60,0,224	1/1:1,9:18:18.02:695,18,0	0/1:31,0:31:16.19:16,0,271	1/1:13,0:13:13.02:414,13,0	1/1:5,9:15:41.89:746,42,0	1/1:6,0:5:2.52:25,3,0	1/1:15,0:13:19.90:160,20,0	0/0:4,0:4:12:0,12,164	0/0:4,0:4:9:0,9,130	0/0:7,0:7:8.94:0,9,176	0/0:7,0:7:15.04:0,15,344	1/1:6,0:23:35.94:703,36,0	1/1:3,1:15:17.95:444,18,0	1/1:7,0:7:18.02:369,18,0
chr10	91657841	.	GGGA	G	1199.92	PASS	AB=0.990;AC=32;AF=0.571;AN=56;BaseQRankSum=-3.728;DP=224;FS=0.758;HRun=0;HaplotypeScore=34.2864;InbreedingCoeff=0.1981;MQ=74.10;MQ0=8;MQRankSum=-0.104;QD=7.59;ReadPosRankSum=-3.004;VQSLOD=1.4261;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:9.02:0,9,108	0/0:6,0:6:14.72:0,15,132	0/1:30,0:12:0.73:1,0,159	0/0:18,0:7:2.66:0,3,71	1/1:2,0:2:5.36:32,5,0	1/1:5,0:5:6.69:43,7,0	0/1:18,0:18:50.78:138,0,51	1/1:6,0:6:17.93:145,18,0	0/1:7,0:7:31.96:32,0,42	1/1:8,0:8:20.76:141,21,0	1/1:6,0:6:17.89:139,18,0	0/1:10,0:9:18.84:54,0,19	1/1:2,7:9:2.05:19,2,0	0/1:6,0:6:27.17:27,0,36	0/0:4,0:4:5.98:0,6,56	0/1:4,0:4:18.14:18,0,37	0/0:15,0:14:8.85:0,9,64	0/1:10,1:11:39:39,0,64	0/0:1,0:1:0:0,0,0	0/0:3,0:2:2.96:0,3,19	1/1:4,0:4:2.99:24,3,0	1/1:3,0:3:8.84:58,9,0	1/1:4,0:4:8.96:69,9,0	1/1:5,0:5:10.75:71,11,0	1/1:6,0:6:14.81:112,15,0	1/1:5,0:4:11.98:99,12,0	0/0:8,0:8:1.91:0,2,55	0/1:9,0:9:25.06:109,0,25
chr10	91657842	.	GGA	G	1398.08	PASS	AB=1.000;AC=36;AF=0.667;AN=54;BaseQRankSum=-4.665;DP=217;FS=1.784;HRun=0;HaplotypeScore=31.6760;InbreedingCoeff=0.4176;MQ=76.40;MQ0=7;MQRankSum=-0.718;QD=10.84;ReadPosRankSum=-1.594;VQSLOD=2.7517;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:9:0,9,78	0/0:6,0:6:14.79:0,15,104	0/0:30,0:13:12.33:0,12,197	0/0:19,0:8:5.65:0,6,88	1/1:2,0:2:5.36:32,5,0	1/1:3,1:4:8.66:64,9,0	1/1:16,2:18:1.26:151,1,0	1/1:7,0:7:20.93:172,21,0	0/1:7,0:7:1.14:41,0,1	1/1:7,0:7:20.76:141,21,0	1/1:6,0:6:17.89:139,18,0	1/1:9,1:9:0.05:92,0,0	1/1:9,0:9:2.56:15,3,0	0/1:6,0:6:2.72:49,0,3	0/0:4,0:4:5.94:0,6,41	0/1:3,0:3:5.59:41,0,6	0/0:15,0:14:4.15:0,4,19	0/1:9,0:9:13.53:32,0,14	./.	0/0:3,0:2:1.25:0,1,3	1/1:4,0:4:2.99:24,3,0	1/1:3,0:3:8.84:58,9,0	1/1:4,0:4:8.96:69,9,0	1/1:4,0:4:11.08:66,11,0	1/1:6,0:6:14.81:112,15,0	1/1:4,0:4:11.98:99,12,0	1/1:6,1:7:2.89:32,3,0	1/1:9,0:9:8.75:129,9,0
chr10	91657843	.	G	GA	120.64	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=0.793;DP=209;FS=0.000;HRun=1;HaplotypeScore=34.7105;InbreedingCoeff=0.6122;MQ=79.82;MQ0=6;MQRankSum=1.670;QD=5.74;ReadPosRankSum=1.544;VQSLOD=0.5401;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:10:8.98:84,9,0	1/1:4,2:6:14.96:128,15,0	0/0:29,0:13:17.96:0,18,197	0/0:19,0:9:5.07:0,5,68	0/0:2,0:2:5.10:0,5,23	0/0:4,0:4:8.70:0,9,48	0/0:17,0:18:32.36:0,32,183	0/0:7,0:7:19.75:0,20,94	0/0:7,0:7:15.18:0,15,95	0/0:8,0:8:20.48:0,20,110	0/0:6,0:6:17.23:0,17,91	0/0:9,0:8:20.29:0,20,119	0/0:9,0:9:2.37:0,2,8	0/0:5,0:5:14.68:0,15,89	1/1:5,0:5:3.88:28,4,0	0/0:3,0:3:8.70:0,9,48	0/0:1,12:12:0.89:0,1,2	0/0:8,0:8:20.02:0,20,125	./.	./.	0/0:4,0:4:2.88:0,3,15	0/0:3,0:3:8.79:0,9,54	0/0:4,0:4:7.81:0,8,36	0/0:4,0:4:10.91:0,11,55	0/0:6,0:6:14.39:0,14,76	0/0:4,0:4:11.30:0,11,56	0/0:5,0:5:9.24:0,9,58	0/0:9,0:9:24.51:0,25,140
chr10	91658970	.	AGAGCTGCGCTG	A	34419.63	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=15.449;DP=699;FS=0.000;HRun=0;HaplotypeScore=241.6293;InbreedingCoeff=0.9920;MQ=79.29;MQ0=1;MQRankSum=-17.053;QD=66.32;ReadPosRankSum=3.046;VQSLOD=4.4686;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,6957	0/0:8,0:8:24.08:0,24,1269	0/0:22,0:22:62.62:0,63,2314	0/0:28,0:28:77.85:0,78,3240	1/1:4,29:33:57.20:1976,57,0	1/1:0,20:20:42.14:1496,42,0	1/1:5,16:21:36.12:1282,36,0	1/1:5,30:35:90.09:2338,90,0	1/1:4,18:21:48.16:1709,48,0	1/1:5,21:26:63.14:2073,63,0	1/1:2,18:20:36.12:1281,36,0	1/1:0,15:15:36.12:1232,36,0	1/1:2,21:23:54.19:1923,54,0	1/1:3,18:21:51.17:1766,51,0	0/0:38,0:37:99:0,114,6173	1/1:5,30:35:72.25:2564,72,0	0/0:40,0:40:99:0,117,6091	1/1:4,10:14:15.05:535,15,0	1/1:4,12:16:35.97:645,36,0	1/1:2,30:32:60.21:2053,60,0	1/1:6,15:21:15.05:534,15,0	1/1:1,25:26:51.17:1693,51,0	1/1:3,24:27:51.65:1746,52,0	1/1:5,23:28:42.14:1424,42,0	1/1:1,15:16:27.09:961,27,0	1/1:2,23:25:69.03:1877,69,0	1/1:1,27:28:72.25:2564,72,0	1/1:1,14:15:21.07:748,21,0
chr10	91659193	.	G	GT	1887.61	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-11.302;DP=553;FS=8.963;HRun=7;HaplotypeScore=90.4482;InbreedingCoeff=0.8534;MQ=63.32;MQ0=0;MQRankSum=0.910;QD=23.30;ReadPosRankSum=2.236;VQSLOD=3.4992;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:27.08:326,27,0	1/1:0,9:9:21.06:254,21,0	0/0:9,0:7:9.75:0,10,94	0/1:12,0:11:22.48:22,0,89	0/0:33,0:33:99:0,99,943	0/0:26,0:26:72.10:0,72,689	0/0:24,0:24:62.30:0,62,578	0/0:22,0:22:54.05:0,54,506	0/0:15,0:15:45.07:0,45,432	0/0:38,0:37:99:0,105,1002	0/0:19,0:19:51.07:0,51,489	0/0:17,0:17:48.05:0,48,454	0/0:21,0:21:57.53:0,58,542	0/0:18,0:18:48.06:0,48,463	1/1:3,21:24:54.17:652,54,0	0/0:20,0:20:57.09:0,57,549	1/1:3,22:25:66.20:797,66,0	0/0:8,0:8:18.02:0,18,173	0/0:22,0:21:48.54:0,49,461	0/0:15,0:15:36.04:0,36,347	0/0:13,0:13:30.02:0,30,280	0/0:23,0:23:60.08:0,60,575	0/0:26,0:26:66.08:0,66,630	0/0:13,0:13:34.87:0,35,324	0/0:21,0:21:48.04:0,48,454	0/0:28,0:28:75.10:0,75,724	0/0:27,0:27:72.08:0,72,692	0/0:14,0:14:42.07:0,42,404
chr10	91660190	.	TGG	T	2543.42	PASS	AC=42;AF=0.840;AN=50;BaseQRankSum=-3.448;DP=157;FS=3.032;HRun=11;HaplotypeScore=22.9540;InbreedingCoeff=0.5321;MQ=77.85;MQ0=0;MQRankSum=-0.404;QD=18.98;ReadPosRankSum=3.500;VQSLOD=0.9884;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:5,0:5:14.97:0,15,165	0/0:8,0:7:7.23:0,7,114	1/1:2,4:6:15.03:153,15,0	1/1:0,1:1:3.01:32,3,0	1/1:3,13:16:30.07:319,30,0	1/1:5,2:7:9:88,9,0	1/1:1,3:4:12.03:127,12,0	1/1:3,9:12:5.63:254,6,0	1/1:3,2:5:12.03:127,12,0	1/1:1,4:5:3.01:32,3,0	1/1:2,2:4:3:32,3,0	1/1:4,3:7:12.02:124,12,0	0/0:1,0:1:3.01:0,3,45	1/1:2,0:2:2.99:24,3,0	0/0:4,0:4:3.01:0,3,39	1/1:2,6:8:17.99:179,18,0	1/1:6,0:6:8.94:74,9,0	1/1:1,3:4:9.02:96,9,0	1/1:7,11:18:18.26:349,18,0	1/1:2,1:3:5.95:63,6,0	1/1:0,2:2:6.02:64,6,0	1/1:3,6:9:24.06:255,24,0	1/1:1,3:4:12.03:127,12,0	1/1:3,3:6:6:64,6,0	1/1:2,3:5:9.01:96,9,0	./.
chr10	91660200	.	GGT	G	662.72	PASS	AB=0.910;AC=24;AF=0.462;AN=52;BaseQRankSum=4.851;DP=162;FS=20.465;HRun=0;HaplotypeScore=31.6298;InbreedingCoeff=-0.1307;MQ=81.21;MQ0=0;MQRankSum=2.478;QD=5.18;ReadPosRankSum=8.527;VQSLOD=0.4809;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:10,0:7:17.57:0,18,160	0/0:10,0:8:7.22:0,7,92	1/1:4,1:5:12.62:73,13,0	0/1:2,0:2:1.74:2,0,18	1/1:14,0:14:6.61:69,7,0	0/1:8,0:8:37.35:37,0,85	0/1:4,1:5:7.17:38,0,7	0/1:13,0:13:29.19:29,0,37	0/1:3,2:5:11.44:63,0,11	0/0:7,0:7:4.27:0,4,76	0/1:3,0:3:1.69:2,0,15	0/1:5,1:6:32.95:44,0,33	0/0:1,0:1:3.01:0,3,50	0/0:1,0:1:0.47:0,0,1	0/0:2,0:2:5.60:0,6,28	1/1:6,1:7:16.26:108,16,0	0/1:3,2:5:19.60:20,0,41	0/1:4,0:4:14.65:17,0,15	0/1:19,1:20:95.83:96,0,125	0/1:4,1:5:26.93:39,0,27	1/1:3,0:3:4.59:15,5,0	1/1:6,2:8:20.66:109,21,0	0/1:4,1:5:12.39:40,0,12	0/1:5,0:5:6.19:6,0,42	0/1:5,0:5:8.20:8,0,32	0/0:2,0:2:2.99:0,3,24
chr10	91660531	.	CTA	C	19451.05	PASS	AB=0.800;AC=45;AF=0.804;AN=56;BaseQRankSum=7.546;DP=554;FS=16.626;HRun=0;HaplotypeScore=73.0587;InbreedingCoeff=0.8867;MQ=78.09;MQ0=0;MQRankSum=-4.965;QD=44.11;ReadPosRankSum=3.481;VQSLOD=4.8178;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,2119	0/1:6,2:8:73.65:74,0,329	0/0:21,0:20:60.20:0,60,1147	0/0:19,0:18:51.15:0,51,942	1/1:0,23:23:63.22:1023,63,0	1/1:0,21:21:57.19:915,57,0	1/1:0,14:14:33.11:538,33,0	1/1:0,29:29:84.22:1331,84,0	1/1:0,19:19:54.18:879,54,0	1/1:0,30:30:90.16:1409,90,0	1/1:0,15:15:39.13:635,39,0	1/1:0,16:16:42.14:683,42,0	1/1:0,18:18:51.13:816,51,0	1/1:0,21:21:57.19:927,57,0	0/0:20,0:20:60.21:0,60,1195	1/1:0,13:13:36.12:586,36,0	0/0:15,0:15:45.14:0,45,877	1/1:1,23:24:62.20:1023,62,0	1/1:0,15:15:45.11:651,45,0	1/1:0,20:20:45.15:732,45,0	1/1:0,18:18:54.18:879,54,0	1/1:0,23:23:66.23:1075,66,0	1/1:0,14:14:42.14:670,42,0	1/1:0,24:24:63.22:1024,63,0	1/1:0,15:15:42.14:684,42,0	1/1:1,30:31:93.16:1435,93,0	1/1:0,18:18:54.18:875,54,0	1/1:0,12:12:36.12:586,36,0
chr10	91661039	.	C	CAT	17952.03	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-10.715;DP=636;FS=17.656;HRun=0;HaplotypeScore=71.7583;InbreedingCoeff=0.9742;MQ=76.27;MQ0=0;MQRankSum=-3.588;QD=36.19;ReadPosRankSum=2.225;VQSLOD=5.7728;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:75.24:0,75,974	0/0:9,0:9:24.05:0,24,295	0/0:27,0:28:61.09:0,61,730	0/0:16,1:16:6.04:0,6,207	1/1:8,24:32:57.19:950,57,0	1/1:1,26:27:51.17:867,51,0	1/1:3,15:18:36.12:608,36,0	1/1:8,25:33:75.19:1167,75,0	1/1:4,20:24:48.16:816,48,0	1/1:3,34:38:99:1754,108,0	1/1:1,25:26:69.24:1174,69,0	1/1:3,14:17:33.11:561,33,0	1/1:1,8:10:15.05:255,15,0	1/1:2,10:13:30.10:510,30,0	0/0:32,0:32:81.25:0,81,1033	1/1:5,14:20:39.13:663,39,0	0/0:25,0:24:72.17:0,72,887	1/1:1,13:14:30.10:510,30,0	1/1:5,20:25:57.16:901,57,0	1/1:3,21:24:60.21:1020,60,0	1/1:4,17:21:48.16:781,48,0	1/1:4,19:23:39.13:663,39,0	1/1:4,17:22:45.15:763,45,0	1/1:1,10:11:24.08:408,24,0	1/1:4,22:28:57.20:968,57,0	1/1:1,16:18:51.15:827,51,0	1/1:4,17:22:50.91:866,51,0	1/1:3,27:30:54.18:918,54,0
chr10	91661625	.	G	GGGGAGA	9990.50	PASS	AC=40;AF=0.741;AN=54;BaseQRankSum=8.151;DP=475;FS=12.379;HRun=0;HaplotypeScore=122.3456;InbreedingCoeff=0.8307;MQ=74.66;MQ0=4;MQRankSum=-10.107;QD=35.05;ReadPosRankSum=-5.009;VQSLOD=2.8625;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:69.18:0,69,1369	0/0:2,0:2:3.01:0,3,65	0/0:30,0:26:14.98:0,15,531	0/0:36,0:30:30.54:0,31,732	0/0:5,10:15:0.94:0,1,2	1/1:6,5:10:18.06:573,18,0	1/1:11,12:25:29.13:917,29,0	1/1:6,7:16:35.97:659,36,0	1/1:8,7:17:27.09:810,27,0	1/1:2,10:12:27.07:663,27,0	1/1:1,8:9:3.01:101,3,0	1/1:5,11:17:30.10:958,30,0	1/1:4,8:12:12.04:403,12,0	1/1:7,3:11:12.04:352,12,0	0/0:28,0:28:57.17:0,57,1146	1/1:7,11:18:30.10:880,30,0	0/0:29,0:29:75.20:0,75,1479	1/1:1,7:8:9.03:304,9,0	1/1:2,4:7:15.02:311,15,0	1/1:1,7:8:15.01:390,15,0	1/1:25,15:40:18.04:505,18,0	1/1:7,14:22:20.96:661,21,0	1/1:6,6:11:12.02:271,12,0	./.	1/1:1,7:8:6.02:140,6,0	1/1:6,7:13:20.80:383,21,0	1/1:2,9:11:12.04:404,12,0	1/1:5,0:5:12.04:307,12,0
chr10	91662231	.	TAA	T	1858.96	PASS	AB=0.745;AC=32;AF=0.571;AN=56;BaseQRankSum=7.760;DP=485;FS=0.536;HRun=17;HaplotypeScore=138.6686;InbreedingCoeff=0.1774;MQ=55.35;MQ0=8;MQRankSum=-6.793;QD=5.04;ReadPosRankSum=1.114;VQSLOD=-0.1401;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:29:30.93:0,31,309	0/0:2,0:4:8.95:0,9,70	0/0:25,0:11:5.26:0,5,56	0/0:15,0:9:1.34:0,1,19	0/1:14,7:21:4.71:114,0,5	1/1:8,6:15:25.06:154,25,0	0/1:8,6:13:6.37:68,0,6	0/1:11,5:15:2.36:121,0,2	1/1:10,10:20:25.76:245,26,0	0/1:12,1:20:21.54:22,0,45	0/1:13,2:20:49.17:49,0,60	0/1:11,7:19:2.83:127,0,3	0/1:13,1:18:6.47:15,0,6	1/1:15,3:18:22.55:109,23,0	0/0:5,0:11:11.93:0,12,121	1/1:16,2:19:14.78:74,15,0	0/0:12,0:21:30.04:0,30,304	1/1:14,3:15:5.97:106,6,0	1/1:11,3:13:20.30:138,20,0	1/1:11,7:18:3.28:137,3,0	1/1:6,2:8:2.72:13,3,0	0/1:7,1:9:15.87:16,0,17	0/1:13,1:16:12.81:13,0,29	0/0:7,0:10:0.35:0,0,2	0/1:17,1:25:22.92:41,0,23	1/1:14,12:26:41.55:264,42,0	1/1:11,8:19:12.68:186,13,0	1/1:7,1:8:1.87:18,2,0
chr10	91662243	.	AAAAAAGAAAG	A	11173.05	PASS	AB=0.986;AC=40;AF=0.714;AN=56;BaseQRankSum=9.096;DP=480;FS=1.676;HRun=0;HaplotypeScore=166.8739;InbreedingCoeff=0.4109;MQ=51.62;MQ0=12;MQRankSum=-6.201;QD=28.72;ReadPosRankSum=5.331;VQSLOD=3.8762;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:46.02:0,46,1389	0/0:3,0:3:8.95:0,9,179	0/0:22,0:8:11.16:0,11,115	0/1:13,0:4:8.67:9,0,16	1/1:19,1:18:34.67:708,35,0	1/1:12,1:13:25.78:576,26,0	1/1:12,0:11:17.08:450,17,0	1/1:15,0:13:0.11:337,0,0	0/1:20,1:21:65.34:915,0,65	0/1:30,0:29:4:659,0,4	0/1:26,0:25:18.78:285,0,19	1/1:18,0:17:43.87:920,44,0	1/1:16,1:17:23.14:502,23,0	1/1:16,1:18:33.04:685,33,0	0/0:13,0:13:21.07:0,21,702	1/1:20,1:21:21.35:463,21,0	0/0:21,0:21:42.13:0,42,1495	1/1:13,1:12:18.32:572,18,0	1/1:11,0:8:24.01:336,24,0	1/1:24,1:24:17.47:604,17,0	1/1:10,0:10:2.91:72,3,0	0/1:7,0:6:11.12:174,0,11	0/1:23,0:22:9.16:276,0,9	1/1:9,0:9:9.98:127,10,0	1/1:24,0:25:25.20:756,25,0	1/1:17,2:19:49.21:987,49,0	1/1:15,1:17:18.87:683,19,0	1/1:3,0:3:2.96:79,3,0
chr10	91662244	.	AAAAAGAAAG	A	10717.97	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=7.804;DP=491;FS=0.000;HRun=0;HaplotypeScore=169.5743;InbreedingCoeff=0.7372;MQ=50.47;MQ0=12;MQRankSum=-4.070;QD=27.55;ReadPosRankSum=2.782;VQSLOD=4.1262;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:42.62:0,43,1239	0/0:3,0:3:3.01:0,3,123	0/0:20,0:6:11.74:0,12,104	0/0:13,0:4:2.13:0,2,14	1/1:21,0:19:30.69:633,31,0	1/1:13,0:13:20.59:440,21,0	1/1:11,0:10:23.98:397,24,0	1/1:16,0:14:8.70:274,9,0	0/1:22,0:21:63.39:710,0,63	1/1:31,1:31:46.89:869,47,0	1/1:26,0:25:23.46:378,23,0	1/1:19,0:17:44.17:773,44,0	1/1:18,0:18:41.41:639,41,0	1/1:18,0:18:33.11:616,33,0	0/0:13,0:13:21.07:0,21,629	1/1:22,0:22:21.46:395,21,0	0/0:21,0:21:40.02:0,40,1310	1/1:14,0:12:28.23:481,28,0	1/1:11,0:8:19.97:224,20,0	1/1:25,0:24:18.61:495,19,0	1/1:10,0:10:2.94:59,3,0	1/1:8,0:7:11.89:228,12,0	1/1:25,0:24:21.90:358,22,0	1/1:9,0:9:10.71:162,11,0	1/1:22,3:25:59.17:1016,59,0	1/1:23,0:23:57.77:924,58,0	1/1:17,0:17:33.85:538,34,0	1/1:4,0:4:6:108,6,0
chr10	91662247	.	AAGAAAGAAAGAAAG	A	19116.56	PASS	AB=0.981;AC=42;AF=0.750;AN=56;BaseQRankSum=6.255;DP=495;FS=12.550;HRun=0;HaplotypeScore=191.3139;InbreedingCoeff=0.6261;MQ=47.95;MQ0=12;MQRankSum=-6.208;QD=47.09;ReadPosRankSum=1.663;VQSLOD=3.5479;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:40.83:0,41,1906	0/0:3,0:3:2.82:0,3,185	0/0:20,0:7:11.21:0,11,204	0/1:13,0:3:1.54:2,0,3	1/1:22,0:20:38.21:1102,38,0	1/1:12,0:12:17.82:849,18,0	1/1:15,0:14:42.10:1105,42,0	1/1:19,0:17:22.30:735,22,0	0/1:22,0:21:99:1131,0,147	1/1:31,0:30:48.85:1336,49,0	1/1:26,0:25:7.07:511,7,0	1/1:19,0:19:55.05:1505,55,0	1/1:18,0:18:47.59:1068,48,0	1/1:19,0:19:33.06:1024,33,0	0/0:13,0:13:21.07:0,21,970	1/1:19,0:19:21.52:573,22,0	0/0:22,0:22:36.10:0,36,1968	1/1:12,0:11:29.55:745,30,0	0/1:11,0:9:3.91:330,0,4	1/1:9,12:20:12.10:798,12,0	0/1:10,0:10:8.60:119,0,9	1/1:4,1:4:12.04:409,12,0	1/1:21,0:20:17.50:547,18,0	1/1:10,0:10:18.20:348,18,0	1/1:25,0:25:46.58:1567,47,0	1/1:29,0:29:54.69:1934,55,0	1/1:18,0:18:35.51:1047,36,0	1/1:5,0:5:12.04:333,12,0
chr10	91662249	.	GAAAGAAAGAAAGA	G	21047.34	PASS	AB=0.875;AC=44;AF=0.786;AN=56;BaseQRankSum=5.479;DP=479;FS=0.602;HRun=0;HaplotypeScore=176.1422;InbreedingCoeff=0.7202;MQ=45.99;MQ0=12;MQRankSum=-7.017;QD=52.75;ReadPosRankSum=0.093;VQSLOD=4.0388;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:45.15:0,45,2015	0/0:1,0:1:3.01:0,3,191	0/0:19,0:6:8.76:0,9,170	0/1:13,0:4:5.76:6,0,97	1/1:15,5:19:46.69:1154,47,0	1/1:6,6:12:27.09:936,27,0	1/1:11,5:15:45.15:1305,45,0	1/1:19,0:19:45.15:1169,45,0	0/1:13,7:20:99:1174,0,108	1/1:8,21:28:67.22:1744,67,0	1/1:9,14:22:24.06:531,24,0	1/1:14,7:19:48.02:1499,48,0	1/1:14,2:16:39.11:1044,39,0	1/1:16,2:19:33.11:990,33,0	0/0:11,0:11:21.07:0,21,958	1/1:15,3:19:21.54:611,22,0	0/0:22,0:22:45.15:0,45,1993	1/1:12,2:12:26.45:709,26,0	1/1:10,2:9:15.05:393,15,0	1/1:17,4:20:29.99:845,30,0	1/1:9,1:10:5.65:117,6,0	1/1:3,2:4:12.04:409,12,0	1/1:4,17:20:23.64:637,24,0	1/1:7,2:10:14.81:386,15,0	1/1:17,7:24:54.49:1685,54,0	1/1:21,8:29:71.88:2201,72,0	1/1:16,2:18:39.13:1096,39,0	1/1:4,1:5:12.04:404,12,0
chr10	91662254	.	AAAG	A	5811.24	PASS	AB=0.938;AC=44;AF=0.786;AN=56;BaseQRankSum=9.292;DP=479;FS=0.576;HRun=0;HaplotypeScore=162.9137;InbreedingCoeff=0.7285;MQ=45.06;MQ0=12;MQRankSum=-6.043;QD=14.35;ReadPosRankSum=0.653;VQSLOD=4.7157;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:51.17:0,51,972	0/0:2,0:2:6.02:0,6,105	0/0:14,0:5:11.62:0,12,138	0/1:11,0:3:5.78:6,0,30	1/1:20,2:20:45.31:372,45,0	1/1:14,0:14:26.79:221,27,0	1/1:16,1:16:39.52:301,40,0	1/1:18,4:21:36.12:331,36,0	0/1:18,3:20:27.04:338,0,27	1/1:24,4:27:48.18:447,48,0	1/1:17,2:18:17.95:172,18,0	1/1:21,2:21:47.89:397,48,0	1/1:15,1:16:38.33:297,38,0	1/1:16,3:19:32.84:291,33,0	0/0:10,0:10:21.07:0,21,409	1/1:18,1:19:20.96:214,21,0	0/0:20,0:20:48.16:0,48,932	1/1:15,0:13:26.76:239,27,0	1/1:10,2:9:13.62:133,14,0	1/1:21,0:20:26.75:234,27,0	1/1:10,0:10:2.93:21,3,0	1/1:6,1:6:14.79:99,15,0	1/1:20,0:19:16.96:146,17,0	1/1:10,0:10:12.21:96,12,0	1/1:23,2:25:53.55:487,54,0	1/1:30,1:31:71.91:557,72,0	1/1:15,3:18:35.21:335,35,0	1/1:5,0:5:11.83:77,12,0
chr10	91662261	.	GA	G	5093.10	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=8.202;DP=446;FS=0.529;HRun=4;HaplotypeScore=146.7406;InbreedingCoeff=0.8033;MQ=46.72;MQ0=6;MQRankSum=-5.797;QD=14.15;ReadPosRankSum=2.132;VQSLOD=3.4180;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:50.18:0,50,656	0/0:2,0:2:6.02:0,6,83	0/0:13,0:4:9.03:0,9,124	0/0:13,0:6:8.99:0,9,88	1/1:13,5:17:17.94:244,18,0	1/1:7,5:12:26.25:200,26,0	1/1:7,8:15:16.41:323,16,0	1/1:7,14:20:17.54:424,18,0	0/1:18,0:17:11.04:146,0,11	1/1:26,0:25:36.61:512,37,0	1/1:17,0:17:14.95:136,15,0	1/1:16,7:22:24.82:297,25,0	1/1:11,2:13:25.73:161,26,0	1/1:19,0:19:21.19:102,21,0	0/0:10,0:10:18.05:0,18,235	1/1:19,0:19:9.79:68,10,0	0/0:20,0:19:45.10:0,45,563	1/1:10,3:13:14.38:109,14,0	1/1:5,10:14:27.87:366,28,0	1/1:18,0:17:22.36:168,22,0	1/1:10,0:10:8.60:53,9,0	1/1:4,3:6:16.56:150,17,0	1/1:18,0:18:18.72:160,19,0	1/1:5,3:8:14.79:142,15,0	1/1:17,4:21:30.06:347,30,0	1/1:16,12:28:77.27:697,77,0	1/1:12,5:17:8.70:175,9,0	1/1:1,3:4:12.01:113,12,0
chr10	91662265	.	AG	A	1500.96	PASS	AB=0.959;AC=30;AF=0.536;AN=56;BaseQRankSum=11.166;DP=453;FS=0.460;HRun=1;HaplotypeScore=154.2625;InbreedingCoeff=0.0335;MQ=46.52;MQ0=6;MQRankSum=-7.981;QD=4.08;ReadPosRankSum=6.200;VQSLOD=0.3359;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:39.60:0,40,673	0/0:2,0:2:6.02:0,6,88	0/0:13,0:5:12.01:0,12,154	0/0:12,0:5:5.17:0,5,80	0/1:17,0:17:11.47:81,0,11	0/1:13,0:13:2.57:45,0,3	1/1:15,0:15:27.66:157,28,0	0/1:20,0:19:26.12:119,0,26	0/1:20,1:20:61.27:61,0,81	0/1:27,0:27:34.29:127,0,34	1/1:15,0:15:12.77:55,13,0	1/1:19,2:20:18.33:126,18,0	0/1:11,2:13:4.40:58,0,4	0/1:17,2:19:0.83:69,0,1	0/0:11,0:11:24.05:0,24,298	0/1:20,0:20:4.98:5,0,38	0/0:19,0:18:45.06:0,45,589	0/1:12,2:14:41.62:42,0,42	0/1:16,0:15:20.09:69,0,20	1/1:17,0:16:16.89:71,17,0	1/1:9,0:9:0.06:2,0,0	1/1:7,0:6:9.92:51,10,0	0/1:18,0:18:21.08:40,0,21	1/1:9,0:9:16.60:80,17,0	0/1:24,1:25:75.07:109,0,75	1/1:28,0:28:33.02:183,33,0	0/1:15,3:18:5.03:101,0,5	0/1:6,0:6:23.47:23,0,29
chr10	91662275	.	AGAAAG	A	4972.98	PASS	AB=0.986;AC=25;AF=0.446;AN=56;BaseQRankSum=14.535;DP=485;FS=14.529;HRun=0;HaplotypeScore=170.0815;InbreedingCoeff=-0.4348;MQ=52.30;MQ0=0;MQRankSum=-10.805;QD=12.69;ReadPosRankSum=11.685;VQSLOD=1.6493;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:44.16:0,44,1189	0/0:3,0:3:8.96:0,9,182	0/0:16,0:8:17.94:0,18,307	0/0:17,0:10:8.75:0,9,153	0/1:15,1:16:57.12:261,0,57	0/1:14,0:14:17.11:229,0,17	1/1:14,0:14:16.63:360,17,0	0/1:19,0:19:77.59:253,0,78	0/1:18,0:18:99:265,0,110	0/1:29,0:29:99:302,0,104	0/1:21,0:21:94.80:95,0,153	1/1:19,1:20:0.62:401,1,0	1/1:10,2:12:7.81:293,8,0	0/1:14,1:15:19.91:263,0,20	0/0:9,0:9:21.04:0,21,458	0/1:22,0:22:94.26:94,0,116	0/0:20,0:19:50.74:0,51,996	0/1:15,1:16:93.17:160,0,93	0/1:21,0:21:99:119,0,177	0/1:21,0:21:99:176,0,107	0/1:12,0:12:12.03:12,0,66	0/1:8,0:8:26.38:129,0,26	0/1:23,0:23:99:127,0,142	0/1:10,0:10:62.33:109,0,62	0/1:22,1:23:85.09:396,0,85	0/1:32,0:32:65.28:551,0,65	0/1:18,1:19:75.08:271,0,75	0/1:7,0:7:52.94:109,0,53
chr10	91664378	.	TG	T	3629.18	PASS	AB=0.952;AC=9;AF=0.161;AN=56;BaseQRankSum=-1.906;DP=577;FS=6.593;HRun=3;HaplotypeScore=73.6354;InbreedingCoeff=0.8304;MQ=68.25;MQ0=5;MQRankSum=-0.097;QD=27.70;ReadPosRankSum=1.854;VQSLOD=2.6536;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,48:54:99:1647,135,0	1/1:0,3:3:9.03:111,9,0	0/1:19,0:11:12.23:12,0,238	0/0:32,0:26:47.53:0,48,811	0/0:19,0:19:54.18:0,54,776	0/0:32,0:32:96.28:0,96,1328	0/0:32,0:32:93.31:0,93,1330	0/0:13,0:13:36.11:0,36,502	0/0:17,0:17:48.14:0,48,672	0/0:12,0:12:33.11:0,33,475	0/0:5,0:5:15.04:0,15,197	0/0:13,0:13:36.09:0,36,480	0/0:22,0:21:63.20:0,63,890	0/0:16,0:16:48.14:0,48,657	1/1:0,27:27:78.25:967,78,0	0/0:18,0:18:51.17:0,51,734	1/1:2,25:27:72.23:892,72,0	0/0:22,0:22:60.19:0,60,841	0/0:19,0:18:48.15:0,48,672	0/0:26,0:26:75.20:0,75,1007	0/0:30,0:30:90.30:0,90,1289	0/0:12,0:12:36.11:0,36,500	0/0:10,0:10:27.08:0,27,368	0/0:30,0:30:90.26:0,90,1271	0/0:16,0:16:42.08:0,42,560	0/0:22,0:22:66.22:0,66,950	0/0:26,0:26:78.24:0,78,1088	0/0:2,0:2:6.02:0,6,86
chr10	91665381	.	A	AAGAGAGAGAGAG	2499.57	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=-4.688;DP=739;FS=0.650;HRun=0;HaplotypeScore=247.3027;InbreedingCoeff=0.5214;MQ=61.50;MQ0=11;MQRankSum=-2.895;QD=11.57;ReadPosRankSum=-5.302;VQSLOD=1.3403;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:35:13.71:499,14,0	1/1:4,2:6:9.03:402,9,0	0/0:41,0:17:5.17:0,5,186	0/1:39,0:22:5.72:6,0,229	0/0:23,0:22:24.19:0,24,211	0/0:29,0:29:27.77:0,28,225	0/0:30,0:30:35.79:0,36,341	0/1:35,0:34:21.44:21,0,247	0/1:18,0:18:21.12:21,0,95	0/0:32,0:32:9.94:0,10,1014	0/0:26,0:26:54.02:0,54,895	0/0:18,0:18:14.87:0,15,110	0/0:24,0:24:32.65:0,33,987	0/0:20,0:21:26.62:0,27,189	1/1:14,14:34:12.04:707,12,0	0/0:27,0:27:42.40:0,42,377	1/1:13,12:27:17.25:985,17,0	0/0:21,0:21:34.88:0,35,235	0/1:20,0:19:23.93:24,0,107	0/0:26,0:26:32.79:0,33,258	0/0:23,0:23:26.92:0,27,212	0/0:19,0:19:9.72:0,10,311	0/0:23,0:23:35.89:0,36,626	0/0:30,0:30:51.07:0,51,944	0/0:17,0:17:27.09:0,27,510	0/0:33,0:31:52.93:0,53,546	0/0:41,0:41:56.32:0,56,439	0/0:19,0:18:11.41:0,11,152
chr10	91665399	.	G	GAGAA	17043.05	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=-1.249;DP=807;FS=12.569;HRun=0;HaplotypeScore=123.8709;InbreedingCoeff=0.3998;MQ=63.13;MQ0=12;MQRankSum=-2.724;QD=23.70;ReadPosRankSum=8.193;VQSLOD=3.2899;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:33:38.39:171,0,38	0/1:7,0:6:33.09:61,0,33	0/0:48,0:22:46.93:0,47,499	0/0:40,0:21:34.67:0,35,517	1/1:1,19:22:36:609,36,0	1/1:3,26:29:33.09:820,33,0	1/1:2,27:35:36.07:816,36,0	1/1:38,0:37:96.06:1226,96,0	1/1:2,14:19:18.06:448,18,0	1/1:1,0:37:99:851,105,0	1/1:1,0:27:59.61:431,60,0	1/1:0,20:20:15.05:399,15,0	1/1:0,0:29:53.67:391,54,0	1/1:2,17:21:24.08:596,24,0	0/1:30,0:30:99:260,0,102	1/1:2,26:29:42.12:1060,42,0	0/1:22,0:21:32.76:153,0,33	1/1:1,26:27:39.12:981,39,0	1/1:5,21:26:68.86:909,69,0	1/1:2,24:29:53.93:996,54,0	1/1:4,21:27:27.09:719,27,0	1/1:1,0:16:29.81:225,30,0	1/1:0,0:30:38.55:281,39,0	1/1:2,0:35:50.71:370,51,0	1/1:0,0:20:26.83:195,27,0	1/1:5,28:35:96.20:1864,96,0	1/1:3,40:45:60.08:1592,60,0	1/1:3,22:25:7.66:619,8,0
chr10	91666248	.	TAAA	T	1568.65	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=4.811;DP=520;FS=3.387;HRun=14;HaplotypeScore=117.1959;InbreedingCoeff=0.8765;MQ=66.48;MQ0=1;MQRankSum=-4.722;QD=18.67;ReadPosRankSum=3.502;VQSLOD=2.7864;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:26:51:575,51,0	1/1:0,5:5:15.04:172,15,0	0/0:16,0:8:9.03:0,9,138	0/1:13,0:11:5.29:5,0,172	0/0:17,0:24:57.07:0,57,830	0/0:22,0:25:69.19:0,69,1174	0/0:9,0:13:30.09:0,30,495	0/0:24,0:26:57.18:0,57,977	0/0:19,0:19:51.14:0,51,847	0/0:13,0:15:36.10:0,36,628	0/0:15,0:17:39.11:0,39,656	0/0:19,0:19:51.17:0,51,867	0/0:15,0:15:39.11:0,39,614	0/0:8,0:8:24.08:0,24,412	1/1:4,18:23:47.98:558,48,0	0/0:20,0:23:63.19:0,63,1063	1/1:0,15:14:35.50:420,36,0	0/0:11,0:13:36.10:0,36,605	0/0:23,0:27:70.97:0,71,1100	0/0:23,0:23:66.21:0,66,1137	0/0:22,0:23:66.66:0,67,1107	0/0:17,0:19:54.11:0,54,874	0/0:10,0:10:30.10:0,30,523	0/0:22,0:26:62.85:0,63,1058	0/0:14,0:16:45.11:0,45,732	0/0:23,0:25:62.19:0,62,990	0/0:19,0:22:54.14:0,54,913	0/0:10,0:11:30:0,30,471
chr10	91666398	.	CAAA	C	17115.50	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-13.455;DP=771;FS=2.977;HRun=10;HaplotypeScore=139.0191;InbreedingCoeff=0.9997;MQ=65.08;MQ0=12;MQRankSum=-0.032;QD=31.99;ReadPosRankSum=2.278;VQSLOD=3.3081;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:28:42.68:0,43,384	0/0:1,0:11:29.91:0,30,240	0/0:60,0:24:46.04:0,46,603	0/0:75,0:28:47.35:0,47,706	1/1:2,24:26:59.96:743,60,0	1/1:5,21:26:69.19:902,69,0	1/1:0,17:17:45.15:614,45,0	1/1:9,21:29:60.15:817,60,0	1/1:1,19:20:39.13:528,39,0	1/1:2,23:25:61.06:870,61,0	1/1:2,23:25:66.12:845,66,0	1/1:1,18:19:42.13:573,42,0	1/1:1,26:27:72.23:983,72,0	1/1:3,17:20:45.14:614,45,0	0/0:2,0:31:69.85:0,70,536	1/1:0,19:19:35.95:491,36,0	0/0:6,0:29:56.78:0,57,441	1/1:1,19:20:51.16:696,51,0	1/1:5,15:20:45.04:574,45,0	1/1:5,31:36:90.27:1221,90,0	1/1:0,27:26:63.20:854,63,0	1/1:0,24:23:63.20:859,63,0	1/1:2,29:31:78.25:1057,78,0	1/1:4,24:28:51.14:696,51,0	1/1:0,23:23:51.17:689,51,0	1/1:4,29:33:84.25:1139,84,0	1/1:4,25:29:69.22:941,69,0	1/1:0,10:10:30.10:409,30,0
chr10	91668006	.	AAAAC	A	9822.36	PASS	AB=1.000;AC=52;AF=0.929;AN=56;BaseQRankSum=1.334;DP=634;FS=0.000;HRun=0;HaplotypeScore=172.5908;InbreedingCoeff=0.4426;MQ=67.15;MQ0=1;MQRankSum=1.408;QD=16.29;ReadPosRankSum=5.607;VQSLOD=4.1046;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:39.43:270,39,0	1/1:14,0:14:27.74:256,28,0	0/0:31,0:25:36.15:0,36,859	0/1:25,0:21:12.02:12,0,745	1/1:36,0:36:66.74:706,67,0	1/1:19,0:19:40.80:460,41,0	1/1:21,0:21:37.77:292,38,0	1/1:27,0:26:53.28:696,53,0	1/1:27,0:27:51:394,51,0	1/1:30,0:30:62.87:476,63,0	1/1:25,0:25:44.11:432,44,0	1/1:18,0:18:15.98:164,16,0	1/1:24,0:24:35.45:325,35,0	1/1:9,0:9:17.33:182,17,0	1/1:25,0:25:50.50:378,51,0	1/1:24,0:24:48.63:330,49,0	1/1:23,0:23:35.01:362,35,0	1/1:23,0:23:42.64:388,43,0	1/1:14,2:16:31.13:363,31,0	1/1:25,1:26:59.52:658,60,0	1/1:24,0:24:53.71:471,54,0	1/1:15,0:15:23.96:244,24,0	1/1:28,1:29:67.70:800,68,0	1/1:16,0:16:30.31:178,30,0	0/1:13,0:13:46.48:130,0,46	1/1:33,1:34:69.96:620,70,0	1/1:31,0:31:46.21:177,46,0	1/1:5,0:5:4.83:57,5,0
chr10	91668014	.	C	CA	9562.69	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=3.824;DP=657;FS=2.063;HRun=3;HaplotypeScore=150.7898;InbreedingCoeff=0.9204;MQ=61.49;MQ0=2;MQRankSum=2.477;QD=16.02;ReadPosRankSum=5.198;VQSLOD=4.6790;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:62.70:407,63,0	1/1:13,0:13:33.82:209,34,0	0/0:30,0:21:39.16:0,39,561	0/0:30,0:24:19.34:0,19,535	1/1:38,0:38:86.81:506,87,0	1/1:21,0:21:47.82:298,48,0	1/1:25,0:25:57.79:391,58,0	1/1:26,0:25:65.86:367,66,0	1/1:26,0:26:68.69:447,69,0	1/1:29,0:29:75.62:550,76,0	1/1:26,0:26:62.36:389,62,0	1/1:18,0:18:44.88:339,45,0	1/1:23,0:23:59.75:385,60,0	1/1:12,0:12:28.05:160,28,0	1/1:24,0:24:63.15:417,63,0	1/1:22,0:22:58.30:416,58,0	1/1:25,0:25:11.14:261,11,0	1/1:23,0:23:59.43:365,59,0	1/1:18,0:18:22.73:210,23,0	1/1:28,0:28:69.46:405,69,0	1/1:28,0:28:64.76:475,65,0	1/1:15,0:15:33.62:196,34,0	1/1:27,0:28:62.92:410,63,0	1/1:15,0:16:24.31:271,24,0	1/1:6,9:15:37.98:433,38,0	1/1:36,0:36:86.97:684,87,0	1/1:32,0:32:77.20:543,77,0	1/1:3,0:3:5.47:30,5,0
chr10	91668017	.	AC	A	18782.47	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=5.481;DP=654;FS=0.000;HRun=1;HaplotypeScore=113.3864;InbreedingCoeff=0.9133;MQ=60.72;MQ0=3;MQRankSum=2.971;QD=31.83;ReadPosRankSum=7.206;VQSLOD=4.0567;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:66.16:842,66,0	1/1:0,13:13:36.10:450,36,0	0/0:34,0:23:46.02:0,46,728	0/0:29,1:24:34.52:0,35,721	1/1:0,37:37:93.21:1126,93,0	1/1:0,21:21:51.12:606,51,0	1/1:2,22:24:44.51:674,45,0	1/1:0,26:25:75.06:791,75,0	1/1:0,26:26:72.21:923,72,0	1/1:0,28:28:84.04:1025,84,0	1/1:0,25:25:69.13:836,69,0	1/1:0,19:19:51.16:697,51,0	1/1:0,24:24:63.11:819,63,0	1/1:0,13:13:30.08:354,30,0	1/1:0,23:23:66.19:851,66,0	1/1:0,21:21:60.18:794,60,0	1/1:3,21:24:15.74:586,16,0	1/1:1,22:23:63.17:797,63,0	1/1:6,12:18:8.88:423,9,0	1/1:1,27:28:78.14:924,78,0	1/1:1,27:28:74.18:894,74,0	1/1:0,15:15:36.09:435,36,0	1/1:2,26:28:77.22:909,77,0	1/1:2,14:16:39.33:563,39,0	1/1:13,3:16:23.07:171,23,0	1/1:1,32:33:98.10:1148,98,0	1/1:1,30:31:70.30:1077,70,0	1/1:0,3:3:6.01:69,6,0
chr10	91668020	.	A	AC	9363	PASS	AB=0.979;AC=50;AF=0.893;AN=56;BaseQRankSum=6.058;DP=667;FS=2.536;HRun=0;HaplotypeScore=151.3793;InbreedingCoeff=0.6334;MQ=60.00;MQ0=3;MQRankSum=4.410;QD=15.55;ReadPosRankSum=6.926;VQSLOD=6.5369;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:66.75:414,67,0	1/1:14,0:14:34.41:204,34,0	0/0:34,1:24:61.78:0,62,715	0/0:30,0:24:49.97:0,50,697	1/1:35,0:35:87.88:495,88,0	1/1:21,0:21:48.31:281,48,0	1/1:24,1:25:27.09:365,27,0	1/1:27,0:26:51.07:377,51,0	1/1:26,0:26:69.19:428,69,0	1/1:28,0:28:82.14:601,82,0	1/1:29,0:29:71.45:427,71,0	1/1:19,0:19:27.09:295,27,0	1/1:25,0:25:61.93:363,62,0	1/1:14,0:14:31.30:178,31,0	1/1:24,0:24:69.75:444,70,0	1/1:21,0:21:58.66:396,59,0	0/1:22,0:23:4.31:224,0,4	1/1:22,1:23:63.15:369,63,0	0/1:20,0:20:82.71:200,0,83	1/1:28,0:28:73.67:412,74,0	1/1:29,0:29:51.73:390,52,0	1/1:15,0:15:34.20:192,34,0	1/1:29,0:29:60.19:406,60,0	1/1:16,0:16:42.54:283,43,0	1/1:3,12:15:38.41:518,38,0	1/1:33,0:33:75.37:566,75,0	1/1:32,0:32:44.18:506,44,0	1/1:2,0:2:5.63:31,6,0
chr10	91668646	.	AT	A	9613.18	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=11.597;DP=373;FS=12.357;HRun=1;HaplotypeScore=169.8283;InbreedingCoeff=0.9227;MQ=71.79;MQ0=0;MQRankSum=-11.483;QD=32.37;ReadPosRankSum=6.465;VQSLOD=2.6784;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:25:57:684,57,0	1/1:0,6:6:18.06:251,18,0	0/0:37,0:37:97.97:0,98,1654	0/0:37,0:36:99:0,103,1549	1/1:0,9:9:17.81:179,18,0	1/1:1,22:24:54.42:807,54,0	1/1:1,8:11:30:358,30,0	1/1:1,3:7:18.03:205,18,0	1/1:3,10:13:38.86:506,39,0	1/1:1,14:15:44.98:597,45,0	1/1:0,7:7:18.02:227,18,0	1/1:1,10:11:32.84:423,33,0	1/1:0,14:15:45.12:603,45,0	1/1:1,9:12:33.07:437,33,0	1/1:1,16:17:48.16:668,48,0	1/1:2,19:21:63.05:831,63,0	1/1:0,10:10:21.04:272,21,0	1/1:0,8:7:15.05:209,15,0	1/1:1,5:6:18.06:243,18,0	1/1:1,7:8:20.95:224,21,0	1/1:2,6:11:14.84:100,15,0	1/1:1,8:9:14.96:165,15,0	1/1:1,5:6:17.97:205,18,0	1/1:0,9:11:11.98:146,12,0	1/1:0,8:9:24.08:334,24,0	1/1:0,5:7:21.06:274,21,0	1/1:2,10:13:36.11:484,36,0	1/1:3,2:5:14.96:183,15,0
chr10	91668649	.	C	CT	1387.20	PASS	AB=0.885;AC=50;AF=0.893;AN=56;BaseQRankSum=12.161;DP=358;FS=16.791;HRun=0;HaplotypeScore=195.3132;InbreedingCoeff=0.5504;MQ=71.47;MQ0=0;MQRankSum=-11.531;QD=4.97;ReadPosRankSum=9.026;VQSLOD=1.2050;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:20,3:23:29.21:122,29,0	1/1:6,0:6:3.72:27,4,0	0/0:41,0:41:99:0,111,1476	0/0:38,0:36:96.49:0,96,1274	1/1:9,1:9:4.31:10,4,0	1/1:23,1:24:31.51:102,32,0	1/1:8,2:10:10.88:30,11,0	1/1:3,3:6:17.63:139,18,0	1/1:12,0:12:20.79:68,21,0	1/1:15,0:15:32.21:188,32,0	1/1:7,0:7:5.97:15,6,0	1/1:11,0:11:19.19:55,19,0	1/1:14,1:15:24.39:74,24,0	1/1:9,2:11:8.30:22,8,0	1/1:16,0:16:20.62:61,21,0	1/1:19,0:19:32.50:96,32,0	1/1:10,0:10:8.71:27,9,0	1/1:8,0:7:8.66:66,9,0	1/1:5,0:5:14.62:85,15,0	1/1:7,0:7:5.09:13,5,0	0/1:7,3:10:0.01:0,0,0	1/1:8,0:8:3.82:10,4,0	0/1:5,0:5:2.77:12,0,3	1/1:9,2:11:2.27:5,2,0	1/1:8,1:9:12.40:34,12,0	1/1:5,2:7:20.02:131,20,0	1/1:10,1:11:23.11:105,23,0	1/1:3,0:3:5.70:19,6,0
chr10	91668652	.	G	GT	685.46	PASS	AB=0.869;AC=49;AF=0.875;AN=56;BaseQRankSum=10.607;DP=365;FS=1.450;HRun=0;HaplotypeScore=203.0445;InbreedingCoeff=0.4261;MQ=70.20;MQ0=0;MQRankSum=-10.175;QD=2.40;ReadPosRankSum=5.713;VQSLOD=2.6162;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,3:23:2.41:56,2,0	1/1:6,0:6:5.64:22,6,0	0/0:41,0:41:89.98:0,90,1413	0/0:38,0:36:99:0,102,1342	1/1:9,1:9:2.55:19,3,0	1/1:23,1:24:9.22:38,9,0	1/1:9,2:11:3.30:6,3,0	1/1:3,3:7:12.84:114,13,0	1/1:10,0:10:5.13:11,5,0	1/1:15,0:15:12.55:54,13,0	1/1:7,0:7:1.15:3,1,0	0/1:10,0:10:0.32:4,0,0	1/1:14,1:15:7.82:19,8,0	0/1:10,2:12:0.77:1,0,3	1/1:16,0:16:4.75:11,5,0	1/1:20,0:20:13.47:64,13,0	1/1:11,0:11:5.95:44,6,0	1/1:9,0:8:11.56:30,12,0	1/1:7,0:7:9.63:28,10,0	1/1:8,0:8:6.15:34,6,0	0/1:6,3:9:0:0,0,0	1/1:9,0:9:2.57:29,3,0	1/1:6,0:6:1.64:31,2,0	1/1:9,2:11:0.89:2,1,0	1/1:8,1:9:2.07:5,2,0	1/1:5,2:7:13.50:87,14,0	1/1:11,1:12:12.21:92,12,0	1/1:2,0:2:1.36:3,1,0
chr10	91668657	.	A	AG	14397.01	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=12.222;DP=480;FS=20.595;HRun=0;HaplotypeScore=223.5543;InbreedingCoeff=0.8768;MQ=60.91;MQ0=0;MQRankSum=-11.669;QD=35.99;ReadPosRankSum=6.292;VQSLOD=1.2521;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:11,19:30:66.22:1016,66,0	1/1:2,6:8:24.07:356,24,0	0/0:40,0:40:88.36:0,88,1446	0/0:40,0:38:99:0,105,1433	1/1:8,8:15:14.81:237,15,0	1/1:5,22:27:64.87:1086,65,0	1/1:2,10:12:24.08:375,24,0	1/1:21,3:24:72.04:1009,72,0	1/1:1,10:11:33.11:515,33,0	1/1:5,14:19:54.18:845,54,0	1/1:6,7:13:23.84:370,24,0	1/1:1,10:11:33.11:515,33,0	1/1:5,14:19:48.16:759,48,0	1/1:6,9:15:39.13:612,39,0	1/1:2,16:18:48.16:760,48,0	1/1:7,18:25:66.22:1021,66,0	1/1:6,12:18:39.13:595,39,0	1/1:1,8:8:24.08:371,24,0	1/1:3,7:10:30.10:455,30,0	1/1:7,9:16:24.08:376,24,0	1/1:9,4:13:3.01:48,3,0	1/1:3,9:12:24.08:372,24,0	1/1:4,7:11:27.09:425,27,0	1/1:2,9:11:12.04:190,12,0	1/1:9,8:17:45.13:687,45,0	1/1:9,9:18:51.10:692,51,0	1/1:2,11:13:35.99:532,36,0	1/1:2,2:4:12.04:180,12,0
chr10	91668978	.	C	CTACA	21629.09	PASS	AB=0.581;AC=41;AF=0.759;AN=54;BaseQRankSum=-13.349;DP=613;FS=6.713;HRun=0;HaplotypeScore=110.9896;InbreedingCoeff=0.8452;MQ=50.43;MQ0=3;MQRankSum=-2.011;QD=46.22;ReadPosRankSum=1.201;VQSLOD=5.4098;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:96.33:0,96,1737	0/0:7,0:6:15.05:0,15,273	0/0:17,0:7:21.04:0,21,340	0/0:18,0:5:9.03:0,9,135	0/1:7,18:25:24.04:376,0,24	1/1:3,18:21:39.13:1020,39,0	1/1:6,20:25:54.19:1414,54,0	1/1:7,15:15:33.11:784,33,0	1/1:2,16:17:42.14:1099,42,0	1/1:4,10:13:30.10:749,30,0	./.	1/1:4,27:30:72.25:1884,72,0	1/1:7,20:29:51.18:1328,51,0	1/1:4,17:21:38.92:1021,39,0	0/0:25,0:25:69.24:0,69,1249	1/1:5,28:33:78.27:2041,78,0	0/0:39,0:39:99:0,114,1960	1/1:4,21:25:63.22:1636,63,0	1/1:9,6:13:18.53:434,19,0	1/1:6,11:17:24.55:622,25,0	1/1:9,39:51:93.59:2433,94,0	1/1:6,5:13:3.01:78,3,0	1/1:2,7:9:15.05:392,15,0	1/1:3,21:25:48.16:1257,48,0	1/1:2,7:12:18.06:470,18,0	1/1:5,9:14:24.05:550,24,0	1/1:5,16:23:36.12:942,36,0	1/1:0,14:16:42.14:1099,42,0
chr10	91669456	.	TTATC	T	4241.07	PASS	AB=0.571;AC=49;AF=0.907;AN=54;BaseQRankSum=-1.732;DP=498;FS=0.000;HRun=0;HaplotypeScore=92.3062;InbreedingCoeff=0.3230;MQ=65.74;MQ0=5;MQRankSum=1.102;QD=9.38;ReadPosRankSum=-0.787;VQSLOD=3.7862;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:24:9:79,9,0	1/1:3,0:12:6.01:55,6,0	0/0:17,0:10:0.47:0,0,1	./.	1/1:2,16:18:35.68:339,36,0	1/1:4,11:15:3.01:47,3,0	1/1:8,6:14:3.01:39,3,0	1/1:32,0:30:17.92:145,18,0	1/1:13,15:28:15.05:234,15,0	1/1:7,0:11:7.08:31,7,0	0/1:3,0:12:0.03:0,0,0	1/1:5,15:20:15.05:234,15,0	1/1:5,0:12:3:28,3,0	1/1:3,9:12:15.01:207,15,0	1/1:5,0:15:11.95:101,12,0	1/1:7,10:17:21.07:328,21,0	0/0:10,0:18:3:0,3,29	1/1:6,5:11:5.98:67,6,0	1/1:13,8:20:24.01:292,24,0	1/1:6,16:22:41.73:425,42,0	1/1:9,15:24:15.05:234,15,0	1/1:6,0:15:5.89:37,6,0	1/1:8,0:22:2.92:18,3,0	1/1:6,0:16:5.90:45,6,0	1/1:3,0:21:20.90:176,21,0	1/1:8,19:26:54.17:811,54,0	1/1:8,12:20:15.05:224,15,0	1/1:6,3:9:3.01:47,3,0
chr10	91670027	.	G	GCACACACACACA	14718.63	PASS	AB=0.985;AC=50;AF=0.893;AN=56;BaseQRankSum=0.500;DP=656;FS=1.986;HRun=0;HaplotypeScore=295.4758;InbreedingCoeff=0.4973;MQ=45.75;MQ0=10;MQRankSum=-1.094;QD=25.73;ReadPosRankSum=2.286;VQSLOD=3.7757;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:0:1,0,0	1/1:12,0:12:6.02:245,6,0	0/0:40,0:22:25.86:0,26,566	0/0:44,0:23:22.71:0,23,427	1/1:22,0:22:9.03:160,9,0	1/1:16,0:16:9.92:442,10,0	1/1:24,0:24:6.91:164,7,0	1/1:41,0:39:69.95:1956,70,0	1/1:22,0:22:18.06:541,18,0	1/1:24,0:24:42.12:1438,42,0	1/1:19,2:21:5.94:200,6,0	1/1:35,0:34:41.90:1232,42,0	1/1:18,0:18:21.03:650,21,0	1/1:19,0:19:21.07:748,21,0	1/1:29,0:29:3.01:155,3,0	1/1:25,0:25:16.32:1203,16,0	1/1:14,0:12:11.97:311,12,0	0/1:10,0:10:11.46:141,0,11	1/1:13,0:12:21.05:626,21,0	1/1:24,0:24:21.07:821,21,0	1/1:23,1:24:0.89:2,1,0	1/1:20,0:21:3.01:103,3,0	1/1:28,1:29:6:136,6,0	1/1:23,1:25:8.16:330,8,0	1/1:15,0:16:6.02:270,6,0	1/1:25,0:25:48.13:1047,48,0	1/1:19,0:19:21.07:799,21,0	1/1:9,0:9:21.07:996,21,0
chr10	91670047	.	AT	A	2616.08	PASS	AB=0.853;AC=47;AF=0.839;AN=56;BaseQRankSum=5.697;DP=560;FS=9.525;HRun=1;HaplotypeScore=214.4973;InbreedingCoeff=0.5053;MQ=37.27;MQ0=13;MQRankSum=-0.989;QD=5.51;ReadPosRankSum=2.467;VQSLOD=-0.1709;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,2:22:1.83:4,2,0	0/1:4,0:4:0:0,0,0	0/0:31,0:15:35.12:0,35,370	0/0:43,0:17:30.85:0,31,318	1/1:16,4:21:9.49:114,9,0	1/1:6,7:15:8.73:49,9,0	1/1:11,8:19:6.49:68,6,0	1/1:28,1:29:37.55:278,38,0	1/1:8,9:19:20.29:166,20,0	1/1:14,5:19:8.60:205,9,0	0/1:21,3:25:2.30:2,0,41	1/1:14,10:29:39.20:270,39,0	0/1:5,5:10:2.55:102,0,3	1/1:4,7:16:23.26:158,23,0	1/1:21,1:21:2.47:6,2,0	1/1:10,11:28:37.32:243,37,0	0/0:11,0:10:8.33:0,8,55	1/1:4,0:5:2.94:18,3,0	1/1:11,2:11:13.23:121,13,0	1/1:5,5:25:20.11:139,20,0	1/1:15,3:18:3.47:27,3,0	1/1:12,5:18:3:25,3,0	1/1:17,5:24:5.52:63,6,0	1/1:15,3:18:6.47:52,6,0	1/1:17,5:22:0.63:22,1,0	1/1:19,6:26:22.94:300,23,0	1/1:7,6:15:23.73:215,24,0	1/1:3,5:9:18.08:112,18,0
chr10	91670073	.	CATCATAATAATA	C	5790.37	PASS	AB=0.739;AC=19;AF=0.339;AN=56;BaseQRankSum=-5.612;DP=596;FS=14.638;HRun=0;HaplotypeScore=251.9908;InbreedingCoeff=0.0739;MQ=43.50;MQ0=8;MQRankSum=2.175;QD=16.36;ReadPosRankSum=6.094;VQSLOD=1.6942;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:3.11:0,3,8	0/0:7,0:7:5.35:0,5,15	0/0:7,0:4:11.98:0,12,217	0/0:14,0:3:8.83:0,9,63	0/1:7,16:22:3.07:30,0,3	0/0:11,11:21:7.59:0,8,28	0/1:8,12:20:1.69:12,0,2	1/1:34,0:33:98.95:1513,99,0	0/1:10,11:21:10.33:118,0,10	0/1:22,0:22:68.67:69,0,479	0/0:28,0:28:42.73:0,43,451	0/1:17,19:36:20.47:356,0,20	0/0:22,0:22:5.61:0,6,331	0/1:12,7:19:24.84:153,0,25	0/1:29,0:29:2.52:83,0,3	0/1:17,12:29:24.08:346,0,24	0/0:16,0:16:8.94:0,9,97	1/1:8,0:8:3.03:190,3,0	1/1:14,0:12:29.98:481,30,0	0/1:21,4:24:30.80:426,0,31	0/1:4,10:14:0.92:108,0,1	0/0:25,0:25:32.55:0,33,285	0/0:28,0:28:29.01:0,29,249	0/0:18,0:18:9.77:0,10,169	0/0:27,0:27:26.89:0,27,312	0/1:8,22:30:63.02:1618,0,63	0/1:8,12:19:6.20:218,0,6	0/1:10,0:8:3.26:69,0,3
chr10	91670076	.	CATAATAATA	C	5548.07	PASS	AB=0.706;AC=27;AF=0.500;AN=54;BaseQRankSum=-4.727;DP=580;FS=25.882;HRun=0;HaplotypeScore=234.0206;InbreedingCoeff=0.5632;MQ=44.43;MQ0=5;MQRankSum=2.129;QD=16.27;ReadPosRankSum=8.447;VQSLOD=2.1470;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:4,23:27:3.11:0,3,8	0/0:3,4:7:6.09:0,6,17	0/0:6,0:4:6.02:0,6,174	./.	0/1:20,2:21:3.14:46,0,3	0/0:18,4:21:0:0,0,0	0/0:16,2:18:2.51:0,3,7	1/1:11,22:32:70.93:1257,71,0	1/1:17,4:21:5.70:87,6,0	0/1:4,0:20:53.87:174,0,54	0/0:9,0:27:37.08:0,37,283	1/1:33,1:34:20.91:335,21,0	0/0:6,0:23:5.61:0,6,193	1/1:16,3:19:8.88:157,9,0	0/1:6,25:31:2.44:130,0,2	1/1:25,2:28:16.13:330,16,0	0/1:4,12:16:0:0,0,0	1/1:8,0:8:11.87:258,12,0	1/1:4,10:13:30:481,30,0	1/1:22,2:23:23.89:517,24,0	0/1:13,1:14:0.92:70,0,1	0/0:9,0:26:32.56:0,33,244	0/0:10,0:27:28.82:0,29,209	0/0:6,0:18:9.77:0,10,87	0/0:9,0:27:26.89:0,27,230	1/1:26,3:30:19.72:1480,20,0	1/1:17,3:19:5.94:150,6,0	1/1:5,0:5:3.01:75,3,0
chr10	91670571	.	TTCTCTCTC	T	387.15	PASS	AB=0.935;AC=18;AF=0.529;AN=34;BaseQRankSum=1.747;DP=486;FS=0.000;HRun=0;HaplotypeScore=118.0709;InbreedingCoeff=0.2726;MQ=68.72;MQ0=18;MQRankSum=-1.064;QD=2.05;ReadPosRankSum=0.456;VQSLOD=1.5739;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:38:3.01:62,3,0	./.	./.	./.	./.	./.	1/1:17,0:19:2.21:7,2,0	0/0:31,0:29:0.94:0,1,2	0/1:13,1:15:12.77:120,0,13	0/1:21,0:19:0:0,0,0	1/1:12,0:15:3.01:56,3,0	1/1:13,0:12:3.01:56,3,0	1/1:9,0:9:2.37:8,2,0	./.	0/0:23,0:23:2.99:0,3,24	1/1:17,0:15:5.86:35,6,0	0/0:25,0:25:12.04:0,12,268	./.	0/0:19,0:18:0.47:0,0,1	0/1:10,0:8:0:0,0,0	0/0:24,0:24:3:0,3,26	./.	./.	./.	./.	0/0:20,0:20:0.89:0,1,2	1/1:18,3:21:2.74:73,3,0	0/1:5,1:4:0.31:69,0,0
chr10	91671277	.	A	AT	940.23	PASS	AB=0.715;AC=11;AF=0.204;AN=54;BaseQRankSum=-6.798;DP=336;FS=0.000;HRun=10;HaplotypeScore=34.9337;InbreedingCoeff=0.5623;MQ=70.07;MQ0=0;MQRankSum=-0.416;QD=13.83;ReadPosRankSum=1.238;VQSLOD=2.6732;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:56.89:0,57,465	0/0:4,0:4:11.99:0,12,98	0/0:14,0:7:5.56:0,6,35	0/0:10,0:7:13.34:0,13,84	0/0:11,1:13:0.01:0,0,196	0/0:11,0:11:26.93:0,27,221	0/0:11,0:11:29.96:0,30,246	0/0:32,0:32:77.85:0,78,635	0/0:3,0:4:11.03:0,11,80	1/1:4,9:13:21.05:224,21,0	0/1:6,6:12:0.60:191,0,1	0/0:8,0:8:11.97:0,12,96	1/1:0,1:1:3.01:32,3,0	0/0:6,0:6:14.98:0,15,123	0/0:6,0:6:17.98:0,18,148	0/0:8,0:8:23.97:0,24,197	0/0:30,0:30:49.26:0,49,609	0/0:20,0:20:23.95:0,24,319	0/0:17,1:18:9.95:0,10,288	0/0:4,0:4:8.99:0,9,74	0/0:5,0:6:17.02:0,17,129	1/1:0,3:3:6.02:64,6,0	./.	0/1:2,8:10:28.24:139,0,28	1/1:2,14:17:23.32:437,23,0	0/1:11,1:11:4.71:5,0,170	0/0:18,0:18:50.94:0,51,419	0/0:19,0:19:44.92:0,45,369
chr10	91671562	.	CTTTT	C	7256.31	PASS	AB=0.548;AC=43;AF=0.768;AN=56;BaseQRankSum=-6.332;DP=386;FS=5.289;HRun=14;HaplotypeScore=69.8901;InbreedingCoeff=0.7297;MQ=66.56;MQ0=13;MQRankSum=-1.814;QD=26.39;ReadPosRankSum=3.522;VQSLOD=3.9155;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:27:30.09:0,30,557	0/0:0,0:1:3.01:0,3,57	0/0:22,0:13:27.03:0,27,423	0/0:15,0:7:7.26:0,7,70	1/1:2,14:16:42.13:567,42,0	1/1:6,9:15:20.41:373,20,0	1/1:1,4:5:11.94:144,12,0	1/1:15,15:27:44.84:574,45,0	1/1:1,9:10:21.05:297,21,0	1/1:1,9:10:24.04:321,24,0	1/1:4,10:14:27.01:373,27,0	1/1:1,3:4:3.01:42,3,0	1/1:0,3:3:9.03:127,9,0	1/1:2,8:10:18.05:255,18,0	0/0:5,0:7:12:0,12,173	1/1:1,14:15:29.70:424,30,0	0/0:15,0:36:99:0,99,1863	1/1:2,16:17:42.12:594,42,0	1/1:7,15:20:44.85:515,45,0	1/1:1,7:8:11.97:169,12,0	1/1:5,6:11:11.98:165,12,0	1/1:1,1:2:2.98:42,3,0	1/1:1,4:5:5.30:84,5,0	1/1:2,6:7:18.06:255,18,0	1/1:2,14:16:30.05:424,30,0	1/1:7,15:22:45.05:619,45,0	1/1:3,11:13:27.01:382,27,0	0/1:3,14:16:25.68:510,0,26
chr10	91671764	.	TTCTA	T	1359.48	PASS	AB=0.821;AC=30;AF=0.625;AN=48;BaseQRankSum=5.635;DP=468;FS=1.971;HRun=0;HaplotypeScore=89.6840;InbreedingCoeff=0.5246;MQ=53.56;MQ0=18;MQRankSum=-1.882;QD=4.74;ReadPosRankSum=1.817;VQSLOD=1.9401;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:0:0,0,0	./.	./.	./.	1/1:15,8:22:17.97:219,18,0	1/1:13,0:19:6.01:55,6,0	1/1:13,0:10:3.01:31,3,0	./.	1/1:11,0:21:12.01:111,12,0	0/0:18,0:17:15.05:0,15,333	0/0:21,0:21:18.06:0,18,367	0/1:5,0:10:0:0,0,0	0/0:7,0:11:9.03:0,9,156	1/1:8,0:10:3:28,3,0	1/1:12,0:12:3:28,3,0	1/1:11,0:13:3:28,3,0	1/1:19,0:18:6.01:56,6,0	1/1:19,2:18:8.99:108,9,0	1/1:15,7:20:18.06:268,18,0	0/1:13,1:14:26.71:27,0,304	1/1:13,7:19:12.04:179,12,0	0/0:4,0:4:6.02:0,6,137	0/0:9,0:9:9.03:0,9,190	0/0:20,0:20:15.05:0,15,319	0/0:12,0:12:6.02:0,6,138	0/1:7,0:12:26.01:26,0,60	1/1:11,13:22:14.88:224,15,0	1/1:15,4:17:9.03:134,9,0
chr10	91673968	.	TACAC	T	814.03	PASS	AB=0.762;AC=36;AF=0.720;AN=50;BaseQRankSum=0.416;DP=387;FS=1.179;HRun=0;HaplotypeScore=76.8529;InbreedingCoeff=0.5017;MQ=52.76;MQ0=22;MQRankSum=-1.960;QD=4.01;ReadPosRankSum=0.144;VQSLOD=1.6406;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:17.99:0,18,268	0/0:9,0:9:15.05:0,15,244	./.	./.	1/1:9,0:9:3.01:44,3,0	1/1:8,0:9:3:28,3,0	0/0:7,0:7:0.11:0,0,0	1/1:27,0:26:0.47:2,0,0	1/1:8,1:12:3.01:47,3,0	1/1:3,1:4:3.01:47,3,0	1/1:7,0:8:2.50:9,2,0	0/1:5,0:5:0:0,0,0	0/0:4,0:4:2.90:0,3,16	1/1:7,0:11:1.23:3,1,0	0/0:12,0:12:21:0,21,321	1/1:3,1:4:3.01:47,3,0	0/0:18,0:18:15.05:0,15,240	1/1:13,2:15:9.03:131,9,0	1/1:7,1:8:4.82:51,5,0	0/1:1,0:2:0:1,0,0	1/1:15,0:13:3.01:37,3,0	1/1:7,0:9:3.01:36,3,0	1/1:8,0:11:5.50:45,6,0	./.	1/1:8,1:13:13.56:71,14,0	1/1:4,4:8:9.03:129,9,0	1/1:12,4:19:9.03:125,9,0	1/1:3,4:7:8.99:104,9,0
chr10	91673984	.	C	CAT	696.97	PASS	AB=0.752;AC=6;AF=0.107;AN=56;BaseQRankSum=-0.234;DP=357;FS=7.309;HRun=0;HaplotypeScore=68.5513;InbreedingCoeff=0.4261;MQ=47.71;MQ0=27;MQRankSum=1.277;QD=9.96;ReadPosRankSum=2.856;VQSLOD=2.3586;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,19:30:51:129,0,51	1/1:7,0:7:14.59:208,15,0	0/0:25,0:2:5.81:0,6,46	0/0:36,0:4:11.99:0,12,111	0/0:10,0:8:8.94:0,9,75	0/0:9,0:9:20.92:0,21,162	0/0:6,0:6:8.95:0,9,75	0/0:28,0:25:71.60:0,72,566	0/0:11,0:11:11.97:0,12,97	0/0:6,0:5:11.92:0,12,91	0/0:11,0:11:20.96:0,21,171	0/0:6,0:5:0:0,0,0	0/0:4,0:2:6:0,6,57	0/0:9,0:9:5.89:0,6,49	1/1:10,1:11:18.54:217,19,0	0/0:4,0:4:8.98:0,9,72	0/1:17,2:19:38.31:274,0,38	0/0:18,0:16:35.63:0,36,253	0/0:10,0:8:20.93:0,21,170	0/0:6,0:5:3:0,3,25	0/0:15,0:13:17.96:0,18,157	0/0:5,0:5:9:0,9,80	0/0:7,0:7:8.99:0,9,78	0/0:9,0:9:8.98:0,9,73	0/0:15,0:13:26.93:0,27,217	0/0:9,0:8:23.77:0,24,171	0/0:20,0:20:35.75:0,36,278	0/0:6,0:6:14.93:0,15,119
chr10	91674012	.	C	CACAT	2152.28	PASS	AB=1.000;AC=31;AF=0.620;AN=50;BaseQRankSum=-7.174;DP=239;FS=0.813;HRun=0;HaplotypeScore=63.7324;InbreedingCoeff=0.1240;MQ=45.22;MQ0=17;MQRankSum=2.626;QD=10.10;ReadPosRankSum=-1.017;VQSLOD=2.4881;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,1:24:27:368,27,0	1/1:8,0:8:17.96:147,18,0	1/1:4,0:2:2.04:6,2,0	./.	0/1:7,0:6:7.25:18,0,7	0/0:2,0:2:2.60:0,3,10	0/1:1,0:1:0:0,0,0	1/1:22,0:19:23.91:195,24,0	0/1:7,0:7:1.73:19,0,2	1/1:8,0:8:12.08:143,12,0	0/1:8,0:8:13.71:62,0,14	./.	0/1:4,0:2:18.98:19,0,19	0/0:6,0:6:2.60:0,3,10	1/1:8,1:9:20.99:237,21,0	0/0:2,0:2:2.60:0,3,10	1/1:17,2:19:17.88:362,18,0	1/1:18,0:17:17.41:265,17,0	1/1:9,0:7:0.90:79,1,0	1/1:8,0:7:8.99:75,9,0	0/1:9,0:7:17.74:18,0,20	0/0:2,0:2:2.84:0,3,14	0/0:3,0:3:3.92:0,4,14	./.	1/1:14,0:13:9.20:116,9,0	0/1:9,0:8:0.90:97,0,1	0/1:14,0:13:24.62:35,0,25	0/1:7,0:7:11.50:32,0,11
chr10	91674899	.	TACACAC	T	783.78	PASS	AC=14;AF=0.269;AN=52;BaseQRankSum=-0.273;DP=420;FS=0.977;HRun=0;HaplotypeScore=111.2068;InbreedingCoeff=0.6955;MQ=48.84;MQ0=10;MQRankSum=-2.941;QD=10.89;ReadPosRankSum=-0.354;VQSLOD=2.6823;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:22:14.20:0,14,163	0/0:11,0:11:11.95:0,12,245	./.	./.	0/0:16,0:16:5.62:0,6,142	0/0:22,0:22:9.03:0,9,231	0/0:21,0:20:6.44:0,6,121	0/0:29,0:28:21.23:0,21,161	0/0:16,0:16:12.67:0,13,194	1/1:9,2:11:9.01:151,9,0	1/1:8,3:12:12.03:206,12,0	0/0:15,0:15:6.02:0,6,155	1/1:6,0:6:5.73:36,6,0	0/0:13,0:13:3.48:0,3,46	0/0:17,0:17:9.03:0,9,291	0/0:11,0:9:9.03:0,9,105	0/0:15,0:18:31.28:0,31,517	0/0:13,0:13:14.51:0,15,234	0/0:12,0:10:12.93:0,13,300	0/0:9,0:9:3.01:0,3,52	0/0:22,0:22:6.02:0,6,115	1/1:7,2:8:6.02:122,6,0	1/1:6,1:8:5.80:111,6,0	1/1:16,1:17:11.64:219,12,0	1/1:7,1:9:6.91:103,7,0	0/0:13,0:13:19.31:0,19,428	0/0:9,0:9:15.05:0,15,267	0/0:7,0:8:6.04:0,6,192
chr10	91674952	.	TAAAA	T	3625.05	PASS	AB=0.704;AC=38;AF=0.679;AN=56;BaseQRankSum=-2.128;DP=466;FS=1.073;HRun=18;HaplotypeScore=97.4058;InbreedingCoeff=0.2792;MQ=60.26;MQ0=19;MQRankSum=-3.984;QD=10.92;ReadPosRankSum=3.567;VQSLOD=-0.4499;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:20:54:0,54,684	0/0:7,0:7:12:0,12,126	0/1:58,0:15:9.78:10,0,172	0/0:61,0:16:22.61:0,23,223	0/1:4,5:14:18.43:132,0,18	0/1:11,12:24:33.90:232,0,34	1/1:5,4:10:13.19:166,13,0	1/1:10,16:28:42.11:469,42,0	1/1:6,4:10:1.88:70,2,0	1/1:6,10:16:29.54:334,30,0	1/1:5,9:15:17.44:203,17,0	0/1:5,4:8:2.42:64,0,2	1/1:2,2:5:8.91:99,9,0	1/1:3,5:9:9.89:111,10,0	0/0:6,0:12:26.77:0,27,360	1/1:4,6:10:19.09:218,19,0	0/0:20,0:29:74.16:0,74,822	1/1:4,5:9:0.44:128,0,0	0/1:9,9:17:49.29:249,0,49	0/1:4,2:6:21.18:26,0,21	1/1:7,5:12:10.71:126,11,0	1/1:1,5:7:8.66:96,9,0	0/1:2,7:11:26.12:98,0,26	1/1:4,6:10:18:202,18,0	1/1:6,8:15:18.64:221,19,0	1/1:2,9:11:23.54:227,24,0	0/1:8,4:12:13.90:37,0,14	1/1:3,4:7:7.31:107,7,0
chr10	91676424	.	TA	T	4611.76	PASS	AB=0.524;AC=37;AF=0.661;AN=56;BaseQRankSum=-2.087;DP=279;FS=6.600;HRun=1;HaplotypeScore=71.9436;InbreedingCoeff=0.8130;MQ=54.39;MQ0=1;MQRankSum=-3.020;QD=21.06;ReadPosRankSum=0.243;VQSLOD=4.5714;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,14:28:20.60:418,21,0	1/1:1,1:2:4.81:28,5,0	0/0:5,0:5:11.87:0,12,165	0/0:3,0:2:6.02:0,6,85	0/1:1,10:11:2.05:167,0,2	1/1:1,10:11:21.06:248,21,0	1/1:1,10:11:18.06:221,18,0	1/1:7,9:16:41.80:379,42,0	1/1:4,9:13:22.26:292,22,0	0/0:16,0:16:47.14:0,47,369	0/0:9,0:9:17.65:0,18,123	1/1:3,2:5:11.65:133,12,0	0/0:3,0:3:6.69:0,7,35	1/1:0,4:4:6.02:69,6,0	1/1:1,4:5:11.86:90,12,0	1/1:0,11:10:12.02:134,12,0	1/1:7,8:15:32.31:263,32,0	1/1:6,7:13:14.98:273,15,0	1/1:0,13:13:32.95:338,33,0	1/1:0,8:7:17.89:146,18,0	1/1:3,3:6:15.88:157,16,0	0/0:2,0:2:3.01:0,3,42	0/0:7,0:7:14.62:0,15,94	0/0:3,0:3:8.30:0,8,49	0/0:12,0:12:31.93:0,32,194	1/1:1,19:20:47.94:485,48,0	1/1:7,6:13:32.74:347,33,0	1/1:2,11:13:30.96:424,31,0
chr10	91676427	.	TA	T	5689.56	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=0.553;DP=290;FS=0.000;HRun=1;HaplotypeScore=71.5902;InbreedingCoeff=0.6178;MQ=47.96;MQ0=1;MQRankSum=-0.440;QD=20.18;ReadPosRankSum=0.857;VQSLOD=4.8971;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,15:28:33.97:421,34,0	1/1:1,1:2:4.81:28,5,0	0/0:4,0:4:8.86:0,9,123	0/0:3,0:1:3.01:0,3,48	1/1:12,0:12:6.27:174,6,0	1/1:12,1:13:27:289,27,0	1/1:10,0:10:18.06:221,18,0	1/1:12,3:15:39.28:345,39,0	1/1:13,1:14:21.91:290,22,0	1/1:7,8:15:40.40:370,40,0	1/1:2,7:9:23.75:186,24,0	1/1:6,0:6:11.38:131,11,0	1/1:2,1:3:8.95:71,9,0	1/1:4,0:4:6.02:69,6,0	1/1:2,4:6:11.86:90,12,0	1/1:10,1:10:12.02:134,12,0	1/1:8,7:15:31.66:258,32,0	1/1:14,1:15:17.54:289,18,0	1/1:13,3:16:33.44:340,33,0	1/1:10,2:11:18.37:148,18,0	1/1:4,0:4:12:130,12,0	./.	1/1:0,6:6:14.99:132,15,0	1/1:0,3:3:8.75:67,9,0	1/1:4,9:13:38.69:313,39,0	1/1:19,2:21:44.64:463,45,0	1/1:15,0:15:32.72:331,33,0	1/1:13,0:13:27.97:400,28,0
chr10	91676430	.	TA	T	5727.24	PASS	AB=0.667;AC=51;AF=0.911;AN=56;BaseQRankSum=0.299;DP=291;FS=0.000;HRun=1;HaplotypeScore=71.9919;InbreedingCoeff=0.5448;MQ=46.25;MQ0=1;MQRankSum=0.742;QD=20.17;ReadPosRankSum=0.237;VQSLOD=4.8047;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,14:26:37.57:416,38,0	1/1:1,0:1:2.99:23,3,0	0/0:4,0:3:5.84:0,6,69	0/0:3,0:1:3.01:0,3,39	1/1:12,0:12:11.39:196,11,0	1/1:13,1:14:27.46:289,27,0	1/1:9,0:9:18.06:223,18,0	1/1:15,0:15:41.59:359,42,0	1/1:11,0:11:20.39:268,20,0	1/1:9,8:17:41.98:387,42,0	1/1:4,7:11:21.53:185,22,0	1/1:4,0:4:8.88:107,9,0	1/1:2,1:3:8.96:73,9,0	1/1:4,0:4:6.02:69,6,0	1/1:6,0:6:11.88:91,12,0	1/1:11,0:10:10.52:131,11,0	1/1:12,2:14:32.70:260,33,0	1/1:14,0:14:3.27:258,3,0	1/1:19,0:19:35.15:346,35,0	1/1:11,0:10:14.79:121,15,0	1/1:4,0:4:12:131,12,0	0/1:1,1:2:0:0,0,0	1/1:0,6:6:15:133,15,0	1/1:0,3:3:8.85:69,9,0	1/1:4,9:13:38.77:316,39,0	1/1:21,0:21:47.64:480,48,0	1/1:14,0:14:30.82:305,31,0	1/1:18,0:18:41.93:489,42,0
chr10	91677878	.	C	CT	6023.63	PASS	AB=0.714;AC=29;AF=0.518;AN=56;BaseQRankSum=-7.541;DP=607;FS=2.071;HRun=9;HaplotypeScore=66.5060;InbreedingCoeff=0.7792;MQ=77.74;MQ0=9;MQRankSum=1.429;QD=18.09;ReadPosRankSum=0.671;VQSLOD=5.1340;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:26:13.45:0,13,488	0/0:10,0:10:20.99:0,21,182	0/0:56,0:26:17.66:0,18,251	0/1:38,0:20:10.30:10,0,60	1/1:3,22:25:63.06:658,63,0	0/1:3,9:12:4.99:178,0,5	1/1:4,13:17:30.08:332,30,0	1/1:9,15:24:45.59:498,46,0	1/1:4,12:16:24.06:265,24,0	0/0:28,0:28:65.96:0,66,570	0/0:10,0:10:4.09:0,4,163	1/1:3,18:21:35.99:381,36,0	0/0:20,0:20:53.98:0,54,468	1/1:2,9:12:23.90:246,24,0	0/0:17,0:17:36.18:0,36,310	1/1:4,13:17:36.03:383,36,0	0/0:33,1:34:65.80:0,66,800	1/1:5,23:27:51.14:564,51,0	1/1:9,20:29:59.35:626,59,0	1/1:3,16:20:43.46:435,43,0	1/1:4,8:12:15.04:166,15,0	0/0:14,0:14:41.99:0,42,363	0/0:14,0:14:32.99:0,33,286	0/0:23,0:23:65.99:0,66,572	0/0:21,1:22:20.32:0,20,386	0/1:5,15:20:22.79:384,0,23	1/1:3,25:28:63.17:697,63,0	1/1:3,10:14:18.05:199,18,0
chr10	91678304	.	A	AT	11113.47	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.127;DP=509;FS=0.000;HRun=9;HaplotypeScore=55.3929;InbreedingCoeff=0.7875;MQ=66.90;MQ0=0;MQRankSum=-0.770;QD=22.63;ReadPosRankSum=4.015;VQSLOD=5.4200;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,2:34:79.55:414,80,0	1/1:2,1:13:25.60:147,26,0	0/0:10,0:8:11.48:0,11,84	0/0:8,0:8:8.77:0,9,65	1/1:2,24:27:69.02:743,69,0	1/1:2,18:20:42.11:465,42,0	1/1:4,13:17:33.09:365,33,0	1/1:7,16:23:2.04:449,2,0	1/1:1,15:16:38.97:431,39,0	1/1:3,17:20:28.09:538,28,0	1/1:2,15:17:45.06:482,45,0	1/1:4,10:14:27.07:299,27,0	1/1:2,19:21:57.15:631,57,0	1/1:3,16:19:42.11:463,42,0	1/1:1,1:21:48.46:260,48,0	1/1:4,12:16:7.03:306,7,0	1/1:2,0:19:45.45:227,45,0	1/1:2,20:22:51.14:564,51,0	1/1:5,12:17:16.02:385,16,0	1/1:1,17:18:28.06:512,28,0	1/1:2,17:19:45.59:499,46,0	1/1:4,12:16:9.96:323,10,0	1/1:1,16:17:39.01:429,39,0	1/1:0,8:8:18.05:199,18,0	1/1:0,18:18:51.14:564,51,0	1/1:4,26:30:57.93:789,58,0	1/1:6,14:20:36.10:398,36,0	1/1:2,7:9:21.06:232,21,0
chr10	91678453	.	TTTTGCAAGAGGAGCCAGG	T	18127.68	PASS	AC=42;AF=0.778;AN=54;BaseQRankSum=10.919;DP=530;FS=2.958;HRun=0;HaplotypeScore=252.0909;InbreedingCoeff=0.9062;MQ=66.50;MQ0=6;MQRankSum=-11.374;QD=52.09;ReadPosRankSum=3.980;VQSLOD=4.0890;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:94.21:0,94,7163	0/0:9,0:9:21.07:0,21,1667	0/0:22,0:13:15.04:0,15,569	0/0:48,0:26:51.57:0,52,2283	1/1:9,13:22:33.07:1491,33,0	1/1:12,8:20:15.05:736,15,0	1/1:13,6:19:9.03:441,9,0	1/1:22,0:22:9.01:108,9,0	1/1:3,6:9:12.04:589,12,0	1/1:16,5:21:15.05:736,15,0	1/1:3,7:10:15.05:735,15,0	1/1:4,12:16:33.11:1618,33,0	1/1:5,10:15:24.08:1177,24,0	1/1:7,7:14:15.05:736,15,0	0/0:21,0:21:51.18:0,51,3751	1/1:7,4:11:9.03:441,9,0	0/0:35,0:35:66.23:0,66,4819	1/1:12,7:19:9.03:441,9,0	1/1:15,11:26:27.09:1132,27,0	1/1:7,7:14:21.07:942,21,0	1/1:14,8:22:10.28:426,10,0	1/1:6,6:12:12.04:589,12,0	1/1:5,6:11:15.05:736,15,0	./.	1/1:1,8:9:24.08:1161,24,0	1/1:8,14:22:45.15:2126,45,0	1/1:13,11:24:25.02:1178,25,0	1/1:6,4:10:12.04:589,12,0
chr10	91679792	.	T	TACAC	4819.46	PASS	AB=0.686;AC=48;AF=0.923;AN=52;BaseQRankSum=-1.542;DP=599;FS=5.171;HRun=0;HaplotypeScore=122.3768;InbreedingCoeff=0.0357;MQ=54.74;MQ0=13;MQRankSum=-0.075;QD=9.23;ReadPosRankSum=0.341;VQSLOD=3.6969;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,7:29:41.97:717,42,0	1/1:15,0:15:8.97:96,9,0	./.	./.	0/1:14,1:24:31.78:93,0,32	1/1:15,0:15:3:25,3,0	1/1:27,0:26:3.24:96,3,0	1/1:22,0:21:7.78:58,8,0	1/1:7,10:20:18.68:369,19,0	1/1:32,0:31:50.30:532,50,0	1/1:13,0:11:8.99:90,9,0	0/1:13,10:26:23.56:393,0,24	1/1:15,0:16:11.03:120,11,0	1/1:7,7:15:11.73:283,12,0	1/1:12,1:25:18.02:322,18,0	1/1:6,0:16:8.96:125,9,0	1/1:11,18:32:11.37:171,11,0	1/1:13,0:23:8.64:133,9,0	1/1:17,1:18:14.81:150,15,0	1/1:7,6:14:2.97:70,3,0	0/0:13,10:24:0.40:0,0,43	1/1:17,0:17:6:78,6,0	1/1:10,0:24:4.92:38,5,0	1/1:24,0:29:2.54:19,3,0	1/1:13,0:13:6.02:117,6,0	1/1:17,1:27:16.41:423,16,0	1/1:4,11:16:7.58:147,8,0	1/1:3,5:9:8.77:154,9,0
chr10	91682151	.	T	TACACTTTTTTTTTTCCCCCAG	76477.72	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.418;DP=583;FS=1.677;HRun=0;HaplotypeScore=232.4778;InbreedingCoeff=0.9776;MQ=56.98;MQ0=0;MQRankSum=-7.220;QD=138.55;ReadPosRankSum=4.125;VQSLOD=4.7497;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,9:43:69.24:5403,69,0	1/1:7,0:7:18:1007,18,0	0/0:14,0:13:33.11:0,33,1508	0/0:17,0:15:42.02:0,42,1642	1/1:9,0:20:54.19:3666,54,0	1/1:16,0:17:48.15:2779,48,0	1/1:13,0:37:54.19:4122,54,0	1/1:30,0:29:74.40:4529,74,0	1/1:11,0:24:48.52:3726,49,0	1/1:17,0:24:63.20:3948,63,0	1/1:7,0:16:33.11:2330,33,0	1/1:7,0:23:33.11:2657,33,0	1/1:4,0:12:15.05:1336,15,0	1/1:10,0:27:42.14:3341,42,0	1/1:7,10:28:54.19:5041,54,0	1/1:5,0:15:27.09:2319,27,0	1/1:20,0:19:42.14:2129,42,0	1/1:4,0:13:18.06:1656,18,0	1/1:6,0:8:24.08:1755,24,0	1/1:14,0:24:54.19:3636,54,0	1/1:11,0:25:21.07:1550,21,0	1/1:10,1:19:39.13:2904,39,0	1/1:6,0:16:27.09:2034,27,0	1/1:8,0:22:27.09:2141,27,0	1/1:11,0:18:36.12:2387,36,0	1/1:10,0:25:72.13:4510,72,0	1/1:7,0:26:41.29:3594,41,0	1/1:7,0:12:24.08:1978,24,0
chr10	91682984	.	CA	C	820.25	PASS	AB=1.000;AC=26;AF=0.500;AN=52;BaseQRankSum=8.951;DP=227;FS=12.705;HRun=2;HaplotypeScore=49.3700;InbreedingCoeff=0.4845;MQ=77.90;MQ0=1;MQRankSum=0.033;QD=6.72;ReadPosRankSum=2.003;VQSLOD=-0.6783;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:24.07:0,24,336	0/0:2,0:2:3.01:0,3,45	0/0:16,0:17:36.60:0,37,494	0/0:4,0:4:12.02:0,12,146	1/1:3,0:3:5.49:24,5,0	0/0:6,0:6:12.03:0,12,160	0/0:17,0:17:48.16:0,48,710	0/1:3,0:2:6.29:6,0,12	0/1:6,0:6:18.44:34,0,18	0/1:4,0:4:9.53:22,0,10	1/1:0,1:1:3.01:35,3,0	1/1:10,0:10:11.13:116,11,0	1/1:6,1:7:14.03:90,14,0	0/1:4,0:4:9.17:15,0,9	0/0:7,0:7:15.03:0,15,189	0/0:9,0:9:24.05:0,24,335	0/0:20,0:20:57.18:0,57,810	0/0:13,0:13:36.07:0,36,490	0/0:1,0:1:2.84:0,3,14	1/1:2,0:2:2.68:11,3,0	1/1:56,1:54:28.52:374,29,0	1/1:3,0:3:8.04:33,8,0	./.	1/1:6,1:7:0.38:71,0,0	1/1:6,0:6:13.64:62,14,0	1/1:6,1:7:0.29:30,0,0	1/1:0,2:2:6.02:73,6,0	./.
chr10	91682986	.	AC	A	2801.30	PASS	AC=30;AF=0.600;AN=50;BaseQRankSum=7.710;DP=233;FS=11.737;HRun=4;HaplotypeScore=45.1540;InbreedingCoeff=0.7984;MQ=75.82;MQ0=1;MQRankSum=-1.256;QD=22.77;ReadPosRankSum=1.538;VQSLOD=1.8548;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:21.07:0,21,293	0/0:2,0:2:3.01:0,3,42	0/0:16,0:16:41.71:0,42,505	0/0:4,0:4:12.04:0,12,156	1/1:1,3:4:6.02:72,6,0	0/0:8,0:8:15.02:0,15,174	0/0:19,0:19:51.15:0,51,695	1/1:3,1:2:3.01:36,3,0	1/1:2,5:7:12.04:144,12,0	1/1:1,4:5:9.03:108,9,0	1/1:1,0:1:3.01:34,3,0	1/1:1,9:10:27.08:322,27,0	1/1:2,4:6:15.05:177,15,0	1/1:2,3:5:6.02:72,6,0	0/0:8,0:8:15.02:0,15,176	0/0:8,0:8:24.07:0,24,320	0/0:22,0:22:63.14:0,63,838	0/0:14,0:14:33.10:0,33,446	./.	1/1:0,2:2:3.01:36,3,0	1/1:7,47:52:99:1291,108,0	1/1:0,3:3:9.03:108,9,0	./.	1/1:1,6:7:15.05:178,15,0	1/1:0,6:6:15.05:180,15,0	1/1:2,5:7:15.05:180,15,0	1/1:2,0:2:5.99:56,6,0	./.
chr10	91683350	.	A	AGTGTGTGTGT	24871.79	PASS	AB=1.000;AC=54;AF=0.964;AN=56;BaseQRankSum=-3.293;DP=694;FS=2.295;HRun=0;HaplotypeScore=231.9310;InbreedingCoeff=-0.0124;MQ=52.02;MQ0=19;MQRankSum=-3.320;QD=35.84;ReadPosRankSum=2.446;VQSLOD=4.1964;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,1:35:23.64:857,24,0	1/1:6,0:6:6.02:259,6,0	0/1:33,0:19:13.76:14,0,33	0/1:33,0:23:20.85:21,0,150	1/1:13,0:24:17.73:464,18,0	1/1:25,0:22:14.17:430,14,0	1/1:29,0:29:23.39:484,23,0	1/1:31,0:31:63.22:1418,63,0	1/1:9,0:29:48.16:1379,48,0	1/1:9,12:25:56.87:1854,57,0	1/1:6,9:17:15.05:744,15,0	1/1:15,0:22:18.06:525,18,0	1/1:6,12:18:36.12:1639,36,0	1/1:13,0:26:24.08:631,24,0	1/1:9,0:27:45.15:1882,45,0	1/1:10,0:18:12.04:517,12,0	1/1:18,1:30:18.06:818,18,0	1/1:19,0:17:29.13:843,29,0	1/1:16,0:19:33.11:854,33,0	1/1:7,0:19:24.08:646,24,0	1/1:14,0:16:8.87:251,9,0	1/1:19,9:29:27.09:1279,27,0	1/1:8,7:16:17.91:895,18,0	1/1:22,14:37:32.84:1551,33,0	1/1:5,13:20:27.09:1202,27,0	1/1:14,1:29:63.17:1470,63,0	1/1:12,0:37:57.14:1680,57,0	1/1:3,0:4:9.03:267,9,0
chr10	91683830	.	CAAA	C	5758.22	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-4.376;DP=466;FS=8.856;HRun=14;HaplotypeScore=79.4033;InbreedingCoeff=0.8720;MQ=58.16;MQ0=20;MQRankSum=-1.664;QD=19.45;ReadPosRankSum=0.592;VQSLOD=3.3338;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:34:41.81:0,42,150	0/0:0,0:4:6.73:0,7,31	0/1:9,0:6:5.50:5,0,148	0/0:5,0:4:9.03:0,9,113	1/1:5,14:19:32.95:364,33,0	0/0:14,0:16:30.06:0,30,497	0/0:22,0:22:60.10:0,60,943	1/1:6,10:18:26.95:317,27,0	1/1:2,11:13:25.60:313,26,0	1/1:1,12:13:36.02:402,36,0	1/1:7,4:8:11.95:140,12,0	1/1:0,9:10:30.02:332,30,0	1/1:6,3:6:2.95:35,3,0	1/1:8,7:14:20.94:243,21,0	0/0:5,0:15:18.25:0,18,57	0/0:10,0:12:36.08:0,36,563	0/0:7,0:24:14.40:0,14,39	0/0:25,0:26:54.07:0,54,836	1/1:5,12:19:35.99:408,36,0	1/1:4,12:12:33.06:370,33,0	1/1:3,12:15:24.66:312,25,0	1/1:4,15:18:32.95:379,33,0	1/1:4,7:10:21:242,21,0	1/1:8,13:20:32.39:385,32,0	1/1:4,15:19:37.56:436,38,0	1/1:7,15:23:49.58:571,50,0	1/1:4,16:20:32.56:367,33,0	1/1:1,4:6:10.59:138,11,0
chr10	91685729	.	A	AT	4835.74	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-12.513;DP=642;FS=0.354;HRun=8;HaplotypeScore=61.8546;InbreedingCoeff=0.9967;MQ=73.09;MQ0=1;MQRankSum=-3.031;QD=27.79;ReadPosRankSum=2.784;VQSLOD=5.3843;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,40:44:99:1143,99,0	1/1:1,11:12:33.10:381,33,0	0/0:15,0:15:30.01:0,30,274	0/0:23,0:20:41.83:0,42,380	0/0:20,0:20:54.01:0,54,490	1/1:4,13:17:45.12:511,45,0	1/1:3,16:19:48.14:554,48,0	0/0:32,0:32:81.02:0,81,736	0/0:23,0:23:59.40:0,59,529	0/0:30,0:30:51.86:0,52,650	0/0:27,0:27:72.03:0,72,656	0/0:24,0:24:66.03:0,66,602	0/0:18,0:18:51.03:0,51,466	0/0:17,0:17:42.01:0,42,384	1/1:1,20:21:51.11:574,51,0	1/1:2,15:17:14.66:423,15,0	1/1:4,20:25:32.78:628,33,0	1/1:0,19:18:54.16:623,54,0	0/0:27,0:27:72.02:0,72,654	0/0:14,0:14:32.97:0,33,294	0/0:32,0:32:90.03:0,90,817	0/0:20,0:20:48.02:0,48,439	0/0:23,0:23:57.03:0,57,521	0/0:31,0:31:87.05:0,87,796	0/0:24,0:24:63.03:0,63,577	0/0:24,0:24:69.03:0,69,631	0/0:33,0:33:87.04:0,87,796	0/0:11,0:11:26.98:0,27,237
chr10	91686140	.	C	CT	1913.95	PASS	AB=0.870;AC=10;AF=0.179;AN=56;BaseQRankSum=-1.272;DP=610;FS=14.462;HRun=11;HaplotypeScore=97.3114;InbreedingCoeff=0.5672;MQ=68.52;MQ0=4;MQRankSum=0.515;QD=11.74;ReadPosRankSum=1.344;VQSLOD=1.7416;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,39:48:38.47:925,38,0	0/1:3,12:15:2.24:151,0,2	0/1:14,0:11:9.95:10,0,79	0/1:11,0:10:15.88:16,0,58	0/0:27,0:27:71.71:0,72,557	0/0:18,0:18:41.79:0,42,324	0/0:25,0:24:59.74:0,60,464	0/1:23,2:25:41.37:41,0,228	0/0:21,0:21:47.79:0,48,371	0/0:24,0:25:30.13:0,30,315	0/0:16,0:17:34.89:0,35,261	0/0:20,0:20:47.74:0,48,369	0/0:14,0:15:31.23:0,31,226	0/0:20,0:20:38.78:0,39,300	1/1:7,19:26:33.84:513,34,0	0/0:20,0:20:50.77:0,51,390	1/1:3,20:23:37.21:419,37,0	0/0:22,0:23:47.38:0,47,413	0/0:19,0:19:38.78:0,39,301	0/0:29,0:29:51.95:0,52,474	0/0:31,0:31:80.62:0,81,624	0/0:24,0:24:17.37:0,17,315	0/0:18,0:20:51.82:0,52,375	0/0:16,0:16:37.67:0,38,283	0/0:20,0:19:41.03:0,41,322	0/0:29,0:29:65.68:0,66,508	0/0:24,1:25:25.13:0,25,366	0/0:2,0:3:8.01:0,8,52
chr10	91687025	.	TAAGTCACACAGCA	T	2403.38	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.045;DP=678;FS=0.000;HRun=0;HaplotypeScore=302.8958;InbreedingCoeff=0.9956;MQ=85.47;MQ0=0;MQRankSum=-7.058;QD=54.62;ReadPosRankSum=-0.218;VQSLOD=2.2704;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,35:44:66.23:2498,66,0	0/0:10,0:10:30.10:0,30,1399	0/0:21,0:21:54.18:0,54,3025	0/0:24,0:24:58.41:0,58,2632	0/0:11,0:11:33.10:0,33,1668	0/0:23,0:22:69.24:0,69,3650	0/0:39,0:39:99:0,108,5464	0/0:27,0:27:75.25:0,75,3546	0/0:27,0:27:78.27:0,78,4367	0/0:24,0:24:66.22:0,66,2788	0/0:11,0:11:31.92:0,32,1263	0/0:21,0:21:63.20:0,63,3000	0/0:16,0:16:42.14:0,42,1898	0/0:37,0:37:99:0,105,5664	0/0:21,0:21:60.21:0,60,3303	0/0:22,0:22:60.21:0,60,2956	0/0:35,0:35:99:0,102,5617	0/0:35,0:35:99:0,99,5281	0/0:28,0:28:75.26:0,75,3867	0/0:19,0:19:51.17:0,51,2458	0/0:56,0:56:99:0,169,8719	0/0:13,0:13:36.12:0,36,1337	0/0:11,0:11:26.76:0,27,1180	0/0:36,0:36:84.03:0,84,3849	0/0:18,0:18:51.15:0,51,2278	0/0:26,0:26:75.26:0,75,4194	0/0:15,0:15:45.15:0,45,2503	0/0:8,0:8:24.08:0,24,1045
chr10	91687040	.	A	AGT	6105.35	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-4.037;DP=662;FS=4.561;HRun=0;HaplotypeScore=144.7313;InbreedingCoeff=0.9958;MQ=88.14;MQ0=0;MQRankSum=-1.856;QD=46.25;ReadPosRankSum=0.283;VQSLOD=5.4226;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:61.93:0,62,395	0/0:8,0:8:20.70:0,21,308	0/0:26,0:26:64.77:0,65,920	0/0:24,0:24:51.42:0,51,809	0/0:12,0:12:33.11:0,33,486	0/0:23,0:22:63.20:0,63,908	0/0:35,0:35:99:0,105,1546	0/0:24,0:24:63.21:0,63,928	0/0:27,0:27:81.27:0,81,1193	1/1:2,19:21:57.19:1045,57,0	1/1:2,9:11:27.09:479,27,0	0/0:18,0:18:54.18:0,54,795	1/1:1,15:16:45.15:842,45,0	0/0:35,0:35:99:0,105,1546	0/0:24,0:24:72.23:0,72,1038	0/0:23,0:23:63.21:0,63,928	0/0:38,0:38:99:0,114,1657	0/0:33,0:33:99:0,99,1458	0/0:24,0:24:66.21:0,66,954	0/0:17,0:17:48.16:0,48,702	0/0:55,0:55:99:0,160,2320	1/1:2,11:13:33.11:598,33,0	1/1:0,14:14:33.11:614,33,0	1/1:1,35:36:81.70:1517,82,0	1/1:1,19:21:54.19:1011,54,0	0/0:28,1:29:28.06:0,28,1137	0/0:15,0:15:45.15:0,45,662	0/0:5,0:5:15.05:0,15,221
chr10	91687878	.	A	AG	9764.96	PASS	AB=0.591;AC=29;AF=0.518;AN=56;BaseQRankSum=5.475;DP=568;FS=0.699;HRun=6;HaplotypeScore=71.2516;InbreedingCoeff=0.9252;MQ=78.19;MQ0=0;MQRankSum=-1.622;QD=29.06;ReadPosRankSum=0.828;VQSLOD=5.4697;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:30:63.20:792,63,0	1/1:1,11:12:27.09:340,27,0	0/0:12,0:12:26.97:0,27,262	0/0:15,0:15:28.77:0,29,300	1/1:2,11:13:26.78:331,27,0	0/0:19,0:19:54.12:0,54,551	0/0:30,0:30:75.15:0,75,758	1/1:3,19:22:51.09:607,51,0	1/1:3,27:30:41.62:837,42,0	0/0:24,0:24:63.14:0,63,643	0/0:13,0:13:36.08:0,36,366	1/1:2,21:23:60.19:755,60,0	0/0:18,0:18:45.10:0,45,459	1/1:3,17:20:42.13:528,42,0	1/1:2,16:18:45.14:566,45,0	0/0:21,0:21:57.11:0,57,575	1/1:4,34:38:99:1230,99,0	0/0:17,0:17:51.11:0,51,514	1/1:3,9:12:27.09:340,27,0	1/1:3,11:14:33.10:407,33,0	1/1:9,49:58:99:1656,132,0	0/0:16,0:16:18.27:0,18,374	0/0:8,0:8:18.04:0,18,184	0/0:28,0:28:69.16:0,69,704	0/0:11,0:11:27.06:0,27,274	0/1:4,9:13:55.67:302,0,56	1/1:2,23:25:63.13:772,63,0	1/1:0,8:8:24.08:302,24,0
chr10	91687884	.	G	GT	2706.64	PASS	AB=0.986;AC=25;AF=0.446;AN=56;BaseQRankSum=15.485;DP=557;FS=5.467;HRun=2;HaplotypeScore=92.3871;InbreedingCoeff=0.5452;MQ=77.91;MQ0=0;MQRankSum=-1.563;QD=8.10;ReadPosRankSum=4.039;VQSLOD=1.3433;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:15.16:245,15,0	1/1:11,0:11:4.51:95,5,0	0/0:11,0:11:24.01:0,24,257	0/0:14,0:14:29.69:0,30,307	1/1:12,1:13:1.94:132,2,0	0/0:18,0:18:54.17:0,54,664	0/0:29,0:29:87.22:0,87,1026	0/1:24,0:24:49.27:147,0,49	0/1:32,0:32:39.69:219,0,40	0/0:22,0:22:63.20:0,63,779	0/0:13,0:13:39.11:0,39,465	1/1:23,0:23:10.31:201,10,0	0/0:17,0:17:48.11:0,48,576	0/1:20,0:20:13.07:146,0,13	1/1:16,0:16:41.76:191,42,0	0/0:19,0:19:54.17:0,54,667	1/1:40,0:40:3.86:313,4,0	0/0:19,0:19:54.13:0,54,640	0/1:13,0:13:64.87:65,0,67	1/1:10,1:11:31.38:179,31,0	1/1:58,1:59:6.42:486,6,0	0/0:16,0:16:42.09:0,42,499	0/0:6,0:6:18.06:0,18,221	0/0:28,0:28:81.13:0,81,945	0/0:11,0:11:27.07:0,27,321	0/1:12,1:13:77.34:98,0,77	1/1:24,0:24:35.31:266,35,0	1/1:8,0:8:22.92:125,23,0
chr10	91688150	.	C	CCT	1219.88	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=-1.943;DP=265;FS=2.513;HRun=0;HaplotypeScore=56.7621;InbreedingCoeff=0.7222;MQ=74.94;MQ0=0;MQRankSum=0.678;QD=9.31;ReadPosRankSum=2.248;VQSLOD=2.7822;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:3.41:16,3,0	0/0:3,0:3:7.48:0,7,46	0/0:14,0:10:24.09:0,24,196	0/0:13,0:11:25.50:0,26,203	0/1:3,0:3:4.58:16,0,5	0/0:12,0:12:20.99:0,21,180	0/0:11,0:11:26.95:0,27,228	1/1:4,10:14:33.35:304,33,0	1/1:2,9:11:8.92:109,9,0	0/0:10,0:10:17.90:0,18,140	0/0:4,0:4:8.92:0,9,67	1/1:10,0:10:2.83:16,3,0	0/0:6,0:6:15.89:0,16,132	1/1:12,2:14:32.46:359,32,0	1/1:13,0:13:5.03:18,5,0	0/0:11,0:11:29.81:0,30,252	0/0:15,0:15:30.08:0,30,213	0/0:10,0:10:14.99:0,15,127	0/1:9,0:9:5.73:107,0,6	1/1:1,6:7:14.19:123,14,0	1/1:10,0:10:18:175,18,0	0/0:8,0:8:18:0,18,157	0/0:7,0:7:15.47:0,15,130	0/0:7,0:7:12.43:0,12,100	0/0:3,0:3:5.99:0,6,50	1/1:10,0:10:9.43:83,9,0	1/1:13,0:13:8.29:44,8,0	1/1:0,3:3:3.01:49,3,0
chr10	91688151	.	C	CT	894.73	PASS	AB=0.820;AC=19;AF=0.339;AN=56;BaseQRankSum=-1.491;DP=260;FS=0.000;HRun=0;HaplotypeScore=49.7794;InbreedingCoeff=0.6091;MQ=75.17;MQ0=0;MQRankSum=-0.504;QD=9.04;ReadPosRankSum=2.084;VQSLOD=3.3675;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:8.52:0,9,40	0/0:3,0:3:7.48:0,7,46	0/0:14,0:10:26.17:0,26,222	0/0:13,0:11:18.17:0,18,177	1/1:1,2:3:1.58:40,2,0	0/0:12,0:12:21.12:0,21,160	0/0:11,0:11:29.91:0,30,243	1/1:12,0:12:24.20:169,24,0	1/1:10,1:11:8.79:71,9,0	0/0:8,0:8:17.90:0,18,140	0/0:4,0:4:8.92:0,9,67	1/1:3,5:9:3:39,3,0	0/0:6,0:6:15.89:0,16,132	1/1:12,2:14:32.54:273,33,0	0/0:13,0:13:11.40:0,11,68	0/0:11,0:11:29.70:0,30,248	0/0:15,0:15:36.23:0,36,231	0/0:10,0:10:14.99:0,15,127	0/1:8,1:9:17.80:104,0,18	1/1:6,0:6:13.14:91,13,0	1/1:10,0:10:18:175,18,0	0/0:9,0:9:17.94:0,18,157	0/0:7,0:7:15.45:0,15,130	0/0:7,0:7:12.84:0,13,100	0/0:4,0:4:5.99:0,6,50	0/1:8,0:8:15.36:45,0,15	0/1:3,11:14:6.47:55,0,6	1/1:3,0:3:2.94:18,3,0
chr10	91688152	.	C	CT	117.66	PASS	AB=0.779;AC=7;AF=0.125;AN=56;BaseQRankSum=1.633;DP=263;FS=1.069;HRun=0;HaplotypeScore=44.8744;InbreedingCoeff=0.3509;MQ=71.65;MQ0=0;MQRankSum=-2.231;QD=2.40;ReadPosRankSum=2.170;VQSLOD=2.0010;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,7:14:8.40:8,0,9	1/1:2,0:2:6.01:64,6,0	0/0:13,0:9:22.89:0,23,188	0/0:12,0:10:10.79:0,11,123	0/1:4,0:4:12.39:12,0,26	0/0:12,0:12:21.44:0,21,175	0/0:11,0:11:29.95:0,30,250	0/0:12,0:12:19.75:0,20,124	0/0:10,0:10:8.42:0,8,48	0/0:9,0:9:17.93:0,18,148	0/0:5,0:5:8.99:0,9,76	0/0:10,0:10:2.68:0,3,12	0/0:7,0:7:17.96:0,18,145	0/0:15,0:15:24.45:0,24,128	0/1:8,6:14:10.79:11,0,33	0/0:11,0:11:29.79:0,30,249	1/1:15,0:15:13.62:147,14,0	0/0:10,0:10:14.99:0,15,128	0/0:9,0:9:22.32:0,22,134	0/0:6,0:6:16.53:0,17,90	0/0:10,0:10:16.30:0,16,71	0/0:9,0:9:20.94:0,21,184	0/0:7,0:7:12.89:0,13,107	0/0:7,0:7:13.20:0,13,100	0/0:4,0:4:5.99:0,6,51	0/0:7,0:7:10.95:0,11,63	0/0:15,0:15:3.96:0,4,58	0/0:3,0:3:2.99:0,3,24
chr10	91688729	.	CGTT	C	3933.35	PASS	AB=0.847;AC=25;AF=0.446;AN=56;BaseQRankSum=5.785;DP=543;FS=1.489;HRun=0;HaplotypeScore=90.3578;InbreedingCoeff=0.5780;MQ=64.65;MQ0=3;MQRankSum=1.646;QD=14.10;ReadPosRankSum=0.749;VQSLOD=3.2386;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:37:60.12:0,60,784	0/0:7,0:13:24.02:0,24,282	0/0:22,0:13:3.48:0,3,61	0/0:20,0:13:3.01:0,3,38	1/1:9,14:23:27.09:375,27,0	0/0:15,0:15:39.13:0,39,750	0/1:21,2:23:26.09:26,0,944	1/1:11,15:26:45.12:589,45,0	1/1:4,5:9:15.05:208,15,0	0/0:32,0:31:51.17:0,51,1000	0/0:20,0:20:27.08:0,27,500	1/1:9,8:18:24.05:312,24,0	0/0:16,0:16:30.10:0,30,583	1/1:4,9:13:15.05:208,15,0	0/0:6,0:16:15.52:0,16,206	0/0:13,0:13:27.09:0,27,537	0/0:8,0:18:30.03:0,30,371	0/1:18,2:21:50.07:50,0,790	1/1:18,11:31:39.06:500,39,0	1/1:4,18:22:38.74:517,39,0	1/1:8,2:10:9.03:123,9,0	0/1:15,2:17:47.17:47,0,528	0/1:10,1:11:17.55:18,0,393	0/0:24,1:25:21.59:0,22,1135	0/0:17,0:17:27.09:0,27,535	0/1:7,10:17:26.55:378,0,27	1/1:12,12:24:21.07:291,21,0	1/1:3,11:14:21.07:291,21,0
chr10	91689586	.	T	TA	2071.75	PASS	AB=0.817;AC=30;AF=0.536;AN=56;BaseQRankSum=6.871;DP=490;FS=2.730;HRun=15;HaplotypeScore=80.9803;InbreedingCoeff=0.6919;MQ=66.95;MQ0=7;MQRankSum=-2.873;QD=6.20;ReadPosRankSum=0.170;VQSLOD=2.8528;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,21:32:20.52:256,21,0	0/1:2,3:5:16.32:16,0,26	0/1:46,0:20:1.21:1,0,85	0/0:29,0:16:15.58:0,16,73	1/1:28,0:28:57.46:254,57,0	0/0:10,0:11:16.66:0,17,93	0/0:13,0:16:25.49:0,25,149	1/1:29,0:30:40.31:178,40,0	1/1:20,0:20:44.15:202,44,0	0/0:13,0:13:17.48:0,17,107	0/0:13,0:15:26.86:0,27,139	1/1:16,0:16:32.91:146,33,0	0/1:5,0:5:9.81:10,0,56	1/1:7,0:8:16.56:76,17,0	1/1:4,12:15:20.77:176,21,0	0/0:7,0:8:16.10:0,16,86	0/1:13,15:29:59.79:194,0,60	0/0:17,0:20:51.14:0,51,299	1/1:16,0:16:21.31:92,21,0	1/1:14,0:15:19.83:92,20,0	1/1:8,0:8:16.57:75,17,0	0/0:6,0:6:8.76:0,9,53	0/0:16,0:16:0.52:0,1,101	0/0:9,0:11:24.33:0,24,131	0/0:9,0:10:25.57:0,26,150	1/1:18,0:18:29.55:129,30,0	1/1:32,0:32:73.68:337,74,0	1/1:5,0:4:10.98:49,11,0
chr10	91689597	.	A	AAAC	7587.49	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-8.350;DP=536;FS=3.932;HRun=0;HaplotypeScore=85.8991;InbreedingCoeff=0.9743;MQ=70.64;MQ0=5;MQRankSum=-2.244;QD=34.80;ReadPosRankSum=3.118;VQSLOD=5.5058;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:60.91:0,61,416	0/0:5,0:5:8.86:0,9,100	0/0:55,0:24:52.75:0,53,506	0/0:33,0:18:10.61:0,11,181	1/1:2,22:32:61.90:1111,62,0	0/0:10,0:10:30.03:0,30,341	0/0:14,0:14:30.08:0,30,401	1/1:7,18:33:86.97:1058,87,0	1/1:2,17:20:47.27:897,47,0	0/0:19,0:19:42.08:0,42,478	0/0:16,0:16:47.31:0,47,528	1/1:0,15:17:35.99:623,36,0	0/0:5,0:5:14.92:0,15,188	1/1:2,9:11:21.07:353,21,0	0/0:19,0:18:35.48:0,35,237	0/0:8,0:8:24.06:0,24,297	0/0:32,0:32:62.84:0,63,539	0/0:21,0:21:54.16:0,54,737	1/1:5,14:20:38.29:486,38,0	1/1:4,10:16:28.12:428,28,0	1/1:2,6:9:18.04:327,18,0	0/0:6,0:6:15.46:0,15,170	0/0:15,0:15:43.58:0,44,482	0/0:12,0:12:36.08:0,36,433	0/0:12,0:12:36.09:0,36,459	1/1:7,11:17:45.03:658,45,0	1/1:2,27:34:79.09:1415,79,0	1/1:1,4:4:12.04:231,12,0
chr10	91690174	.	TTATTTATTTATTTATTTATTTA	T	5204.14	PASS	AB=1.000;AC=23;AF=0.426;AN=54;BaseQRankSum=3.156;DP=191;FS=1.465;HRun=0;HaplotypeScore=96.4194;InbreedingCoeff=0.6359;MQ=51.87;MQ0=11;MQRankSum=-0.643;QD=51.02;ReadPosRankSum=-2.053;VQSLOD=3.2027;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:6:50.17:50,0,184	0/0:0,0:2:3.01:0,3,155	0/0:2,0:2:0.89:0,1,2	0/0:5,0:2:6.02:0,6,162	1/1:0,0:3:8.99:111,9,0	0/0:5,0:5:15.05:0,15,1062	0/0:4,0:4:9.03:0,9,406	1/1:7,0:14:42.13:933,42,0	1/1:1,0:4:9.03:156,9,0	0/0:5,0:4:12.04:0,12,182	0/0:3,0:3:9.03:0,9,302	1/1:0,6:6:6.02:348,6,0	./.	1/1:1,0:2:6.02:171,6,0	0/0:0,0:3:6.02:0,6,277	0/0:4,0:4:9.03:0,9,462	0/0:3,0:18:24.08:0,24,1419	0/0:19,0:18:51.17:0,51,3027	1/1:1,26:27:75.21:1888,75,0	1/1:0,0:1:3.01:45,3,0	1/1:1,0:1:3.01:45,3,0	0/0:1,0:1:3:0,3,25	0/0:3,0:2:6.02:0,6,149	0/0:4,0:4:9.03:0,9,322	0/0:5,0:5:15.05:0,15,892	1/1:1,11:10:30.06:786,30,0	1/1:0,11:11:6.02:301,6,0	1/1:1,5:5:6.02:371,6,0
chr10	91690175	.	TA	T	676.78	PASS	AB=1.000;AC=29;AF=0.537;AN=54;BaseQRankSum=7.191;DP=188;FS=3.844;HRun=1;HaplotypeScore=48.6514;InbreedingCoeff=0.6109;MQ=48.29;MQ0=12;MQRankSum=-1.733;QD=5.25;ReadPosRankSum=-0.410;VQSLOD=0.2791;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,6:6:8.93:63,9,0	1/1:2,0:2:2.74:12,3,0	0/0:1,0:1:0:0,0,0	0/0:4,1:2:6.02:0,6,73	1/1:4,0:3:8.56:46,9,0	0/0:5,0:5:15.05:0,15,217	0/0:4,0:4:6:0,6,70	1/1:19,0:14:33.05:167,33,0	1/1:3,0:3:8.39:40,8,0	0/0:5,0:4:12.04:0,12,175	0/0:3,0:3:9.03:0,9,132	1/1:6,0:6:5.54:25,6,0	./.	1/1:2,0:2:4.04:16,4,0	1/1:3,0:3:5.71:32,6,0	0/0:3,0:3:9.03:0,9,133	0/1:23,0:18:35.04:35,0,116	0/0:20,0:18:38.94:0,39,671	1/1:27,0:26:47.75:230,48,0	1/1:1,0:1:2.80:13,3,0	1/1:2,0:1:2.80:13,3,0	0/0:1,0:1:3:0,3,25	0/0:3,0:2:6.02:0,6,88	0/0:4,0:4:9.03:0,9,123	0/0:5,0:5:15.04:0,15,204	1/1:12,0:10:23.75:114,24,0	1/1:11,0:11:5.72:30,6,0	1/1:6,0:5:5.49:24,5,0
chr10	91690178	.	TTA	T	518.51	PASS	AB=1.000;AC=26;AF=0.500;AN=52;BaseQRankSum=6.419;DP=186;FS=6.576;HRun=0;HaplotypeScore=53.9698;InbreedingCoeff=0.5401;MQ=47.96;MQ0=13;MQRankSum=-5.643;QD=4.08;ReadPosRankSum=1.943;VQSLOD=0.6654;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:6:11.94:106,12,0	1/1:2,0:2:2.98:21,3,0	1/1:1,0:1:3:26,3,0	0/0:5,0:2:6.02:0,6,80	1/1:4,0:3:1.10:6,1,0	0/0:5,0:5:15.05:0,15,258	0/0:3,0:3:6.02:0,6,93	1/1:15,3:13:4.16:116,4,0	0/1:4,0:4:2.44:3,0,2	0/0:5,0:4:12.03:0,12,153	0/0:3,0:3:6.02:0,6,98	1/1:6,0:6:5.64:27,6,0	./.	1/1:1,1:2:5.50:47,6,0	1/1:3,0:3:5.96:43,6,0	0/0:3,0:3:9.03:0,9,140	0/1:23,0:18:63.26:63,0,149	0/0:20,0:18:30.33:0,30,749	1/1:27,0:26:12.54:99,13,0	0/0:1,0:1:1.55:0,2,4	0/0:2,0:1:1.25:0,1,3	./.	0/0:3,0:2:6.02:0,6,84	0/0:4,0:4:9.03:0,9,118	0/0:5,0:4:12.04:0,12,197	1/1:12,0:10:6.86:58,7,0	1/1:11,0:11:5.80:44,6,0	1/1:6,0:5:5.68:28,6,0
chr10	91690194	.	TTA	T	885.17	PASS	AB=0.500;AC=17;AF=0.386;AN=44;BaseQRankSum=3.946;DP=191;FS=3.160;HRun=0;HaplotypeScore=58.8516;InbreedingCoeff=0.5639;MQ=40.56;MQ0=15;MQRankSum=-2.806;QD=9.32;ReadPosRankSum=-2.787;VQSLOD=2.5273;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:3:5.85:0,6,56	0/0:3,0:3:5.77:0,6,31	./.	0/0:3,0:1:3.01:0,3,42	./.	0/0:6,0:6:12.04:0,12,216	0/0:4,0:3:6.02:0,6,99	1/1:13,7:15:27.08:324,27,0	1/1:3,0:3:2.61:35,3,0	./.	0/0:4,0:3:3.01:0,3,57	1/1:6,0:6:2.50:20,3,0	./.	1/1:1,1:2:3:41,3,0	0/0:3,0:3:5.68:0,6,28	0/0:2,0:2:6.02:0,6,99	0/0:25,0:21:23.40:0,23,268	0/0:22,0:18:47.99:0,48,737	1/1:29,0:26:4.10:340,4,0	0/1:0,4:3:0:0,0,0	./.	./.	0/0:3,0:2:3.01:0,3,42	0/0:3,0:3:6.02:0,6,84	0/0:6,0:5:12.04:0,12,197	1/1:12,1:11:17.92:187,18,0	1/1:13,0:12:2.54:40,3,0	1/1:5,0:5:5.95:41,6,0
chr10	91691342	.	T	TTC	10842.43	PASS	AB=0.931;AC=35;AF=0.648;AN=54;BaseQRankSum=2.248;DP=574;FS=5.505;HRun=0;HaplotypeScore=112.6376;InbreedingCoeff=0.7244;MQ=55.83;MQ0=11;MQRankSum=0.889;QD=26.84;ReadPosRankSum=-1.138;VQSLOD=5.5746;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,9:34:77.73:1015,78,0	1/1:9,1:8:8.96:81,9,0	./.	0/0:9,0:5:8.21:0,8,108	1/1:15,4:17:39.77:478,40,0	0/0:19,0:19:9.40:0,9,429	0/1:19,0:17:8.10:79,0,8	1/1:14,0:11:26.75:215,27,0	1/1:20,10:31:92.89:1276,93,0	0/1:18,1:19:50.73:329,0,51	1/1:11,0:11:21.35:166,21,0	1/1:11,8:20:59.98:882,60,0	0/0:21,0:21:42.10:0,42,605	1/1:17,2:19:21.65:615,22,0	1/1:8,1:15:38.93:433,39,0	1/1:29,0:29:53.17:592,53,0	1/1:32,2:33:82.82:681,83,0	0/0:21,0:21:9.85:0,10,256	0/1:12,3:14:64.17:205,0,64	1/1:16,11:27:64.84:992,65,0	1/1:5,14:18:27.91:470,28,0	0/0:14,0:14:22.83:0,23,319	0/0:25,0:25:32:0,32,516	0/0:33,0:33:47.07:0,47,751	0/0:24,0:24:15.82:0,16,340	1/1:21,9:29:77.58:1059,78,0	1/1:14,9:23:62.89:848,63,0	1/1:0,9:12:21.07:426,21,0
chr10	91691349	.	CTCTT	C	4523.24	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-10.754;DP=579;FS=0.000;HRun=0;HaplotypeScore=146.7662;InbreedingCoeff=0.4359;MQ=57.00;MQ0=11;MQRankSum=3.211;QD=11.22;ReadPosRankSum=-2.690;VQSLOD=4.0493;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:24.93:0,25,137	0/0:9,0:7:0.94:0,1,1	0/0:7,0:3:5.85:0,6,45	0/0:10,0:6:1.44:0,1,178	0/1:21,0:19:59.21:112,0,59	1/1:9,11:19:12.04:180,12,0	1/1:19,2:19:41.68:617,42,0	1/1:17,0:14:9.58:99,10,0	0/0:29,0:29:13.71:0,14,167	1/1:19,1:20:29.76:408,30,0	1/1:12,3:15:27.96:292,28,0	0/0:18,0:18:12.97:0,13,81	1/1:6,11:17:12.04:197,12,0	0/1:20,0:20:9.19:9,0,37	0/0:18,0:17:11:0,11,45	1/1:22,5:27:54.97:646,55,0	0/1:39,0:36:4.05:16,0,4	1/1:4,17:21:18.06:295,18,0	0/1:16,0:14:12.05:12,0,31	0/0:29,0:29:31.19:0,31,186	0/1:17,0:16:6.14:6,0,86	1/1:3,10:13:18.06:293,18,0	1/1:3,19:22:23.78:388,24,0	1/1:7,23:31:27.04:421,27,0	1/1:4,22:26:26.13:400,26,0	0/1:26,0:25:52.53:53,0,63	0/0:23,0:23:23.68:0,24,144	0/1:14,0:14:80.94:81,0,113
chr10	91691351	.	CTT	C	9167.04	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=4.181;DP=571;FS=1.211;HRun=3;HaplotypeScore=110.7955;InbreedingCoeff=0.0561;MQ=57.12;MQ0=11;MQRankSum=2.793;QD=16.58;ReadPosRankSum=6.172;VQSLOD=2.1293;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,20:32:69.88:778,70,0	1/1:1,8:7:6.02:92,6,0	0/0:7,0:3:5.85:0,6,45	0/0:11,0:7:14.17:0,14,155	1/1:10,11:19:50.85:565,51,0	0/1:19,0:18:23.48:23,0,198	0/1:22,0:20:12.73:179,0,13	1/1:3,13:13:36.06:452,36,0	1/1:15,13:28:81.66:862,82,0	0/1:21,0:21:19.97:207,0,20	1/1:15,0:15:26.21:171,26,0	1/1:9,8:17:49.99:516,50,0	0/1:17,0:17:16.31:16,0,198	1/1:10,9:19:46.89:543,47,0	1/1:8,10:17:33.60:382,34,0	1/1:27,0:27:42.28:299,42,0	1/1:8,31:37:42.16:985,42,0	0/1:20,0:20:42.66:43,0,72	1/1:13,2:13:12.65:265,13,0	1/1:12,17:29:67.83:706,68,0	1/1:12,4:15:29.44:241,29,0	0/1:13,0:13:44.16:44,0,54	0/1:22,0:22:56.43:56,0,84	0/1:31,0:31:55.87:56,0,185	0/1:25,0:25:35.22:63,0,35	1/1:9,16:24:71.49:729,71,0	1/1:9,15:24:61.79:671,62,0	1/1:12,0:12:34.72:221,35,0
chr10	91692292	.	TTC	T	496.39	PASS	AB=0.954;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.419;DP=462;FS=9.255;HRun=0;HaplotypeScore=116.6537;InbreedingCoeff=0.0817;MQ=58.31;MQ0=3;MQRankSum=2.455;QD=5.23;ReadPosRankSum=3.225;VQSLOD=2.5332;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,1:32:99:258,0,115	1/1:0,3:3:3.01:38,3,0	0/0:22,0:10:11.19:0,11,146	0/0:26,0:20:39.06:0,39,409	0/0:16,0:16:25.44:0,25,192	0/0:20,0:20:11:0,11,204	0/0:12,0:12:8.84:0,9,170	0/0:27,0:25:55.81:0,56,486	0/0:22,0:22:30.73:0,31,124	0/0:17,0:17:44.75:0,45,462	0/0:13,0:13:32.98:0,33,346	0/0:17,0:17:28.85:0,29,187	0/0:27,0:27:54.14:0,54,703	0/0:6,0:6:9.99:0,10,60	0/1:18,2:20:97.07:172,0,97	0/1:14,0:14:8.68:9,0,100	0/1:14,2:16:88.78:135,0,89	0/0:19,0:19:46.35:0,46,611	0/0:20,0:20:36.51:0,37,216	0/0:10,0:10:21.30:0,21,128	0/0:23,0:23:19.34:0,19,153	0/0:6,0:6:18:0,18,199	0/1:10,0:10:1.26:1,0,244	0/0:22,0:22:54.03:0,54,699	0/0:4,0:3:6.02:0,6,80	0/0:16,0:16:38.17:0,38,297	0/0:15,0:14:27.25:0,27,182	0/0:7,0:7:7.54:0,8,52
chr10	91692304	.	CTGTGTGTG	C	3533.90	PASS	AB=0.778;AC=19;AF=0.380;AN=50;BaseQRankSum=10.268;DP=453;FS=0.000;HRun=0;HaplotypeScore=152.8076;InbreedingCoeff=0.7709;MQ=53.79;MQ0=6;MQRankSum=-9.689;QD=26.37;ReadPosRankSum=-0.011;VQSLOD=2.8354;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:63.68:0,64,2210	0/0:3,0:3:3.01:0,3,84	./.	./.	1/1:9,5:16:5.89:150,6,0	0/0:8,0:16:15.04:0,15,268	0/0:7,0:14:15.04:0,15,394	./.	1/1:3,17:21:45.15:1111,45,0	0/0:19,0:20:42.11:0,42,1192	0/0:15,0:14:18.06:0,18,669	1/1:8,6:14:21.06:471,21,0	0/0:25,0:27:48.15:0,48,1540	1/1:2,2:5:9.03:209,9,0	0/0:21,0:21:47.72:0,48,1655	0/0:5,0:12:15.05:0,15,353	0/0:21,0:21:40.69:0,41,1381	0/0:18,0:20:42.09:0,42,1336	1/1:8,6:16:24.08:562,24,0	1/1:4,3:9:12.04:251,12,0	1/1:22,1:22:3.01:68,3,0	0/0:6,0:6:6.02:0,6,248	0/0:10,0:10:21.07:0,21,753	0/0:24,0:25:51.18:0,51,1923	0/0:8,0:7:18.06:0,18,709	0/1:10,4:14:11.90:289,0,12	1/1:7,4:12:16.30:347,16,0	1/1:2,2:4:3.01:76,3,0
chr10	91696784	.	C	CT	5747.84	PASS	AB=0.680;AC=36;AF=0.643;AN=56;BaseQRankSum=-4.705;DP=384;FS=6.902;HRun=11;HaplotypeScore=49.6366;InbreedingCoeff=0.6252;MQ=57.08;MQ0=2;MQRankSum=-2.694;QD=19.75;ReadPosRankSum=-1.606;VQSLOD=5.2877;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,2:30:10.70:0,11,440	0/0:2,0:2:5.98:0,6,46	0/0:9,0:9:11.17:0,11,49	0/1:9,0:9:12.27:12,0,48	1/1:3,19:23:57.07:568,57,0	0/0:11,0:11:29.88:0,30,232	0/0:8,0:7:17.92:0,18,139	1/1:11,15:25:9.82:275,10,0	1/1:2,9:11:26.85:247,27,0	1/1:4,13:16:36.07:365,36,0	1/1:2,15:18:21.68:384,22,0	1/1:5,5:10:21.88:199,22,0	0/1:3,5:9:22.43:158,0,22	1/1:0,6:6:18.04:183,18,0	0/0:8,0:10:27.94:0,28,193	0/0:5,0:5:11.95:0,12,93	0/0:16,0:15:44.68:0,45,339	1/1:2,17:19:42.08:426,42,0	1/1:7,13:20:1.53:348,2,0	1/1:2,17:19:24.86:433,25,0	0/1:1,7:8:2.20:162,0,2	1/1:2,7:10:21.76:198,22,0	1/1:3,12:16:38.91:380,39,0	0/1:3,7:10:19.63:166,0,20	1/1:3,8:11:3.82:220,4,0	1/1:7,16:22:26.02:435,26,0	1/1:3,11:15:38.46:349,38,0	1/1:3,6:10:26.84:241,27,0
chr10	91697772	.	A	AT	8208.05	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-6.464;DP=503;FS=11.830;HRun=9;HaplotypeScore=65.2205;InbreedingCoeff=0.9487;MQ=60.56;MQ0=5;MQRankSum=-0.770;QD=21.83;ReadPosRankSum=-0.244;VQSLOD=4.8152;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:65.95:0,66,573	0/0:10,0:10:26.99:0,27,234	0/0:17,0:10:26.90:0,27,216	0/0:14,0:7:5.21:0,5,47	1/1:6,16:21:45.07:475,45,0	1/1:3,16:19:48.13:531,48,0	1/1:1,15:16:39.11:431,39,0	1/1:6,16:20:47.78:482,48,0	1/1:8,10:13:33.02:341,33,0	1/1:3,17:20:28.09:538,28,0	1/1:4,23:27:63.13:683,63,0	1/1:5,12:17:33.09:365,33,0	1/1:3,12:15:7.04:306,7,0	1/1:3,7:10:24.06:265,24,0	0/0:22,0:22:50.97:0,51,442	1/1:1,11:12:24.06:265,24,0	0/0:33,0:33:83.98:0,84,729	1/1:6,12:17:16.38:286,16,0	1/1:13,9:21:33.07:355,33,0	1/1:3,8:10:21.02:219,21,0	1/1:5,7:12:18.05:197,18,0	1/1:2,9:11:24.06:261,24,0	1/1:2,11:13:18.05:199,18,0	1/1:0,16:16:30.08:332,30,0	1/1:6,10:15:27.07:299,27,0	1/1:7,15:22:57.15:623,57,0	1/1:10,13:23:47.98:501,48,0	1/1:3,10:13:24.04:254,24,0
chr10	91697794	.	C	CT	1240.80	PASS	AB=0.855;AC=20;AF=0.357;AN=56;BaseQRankSum=2.380;DP=481;FS=10.080;HRun=12;HaplotypeScore=72.0251;InbreedingCoeff=0.3538;MQ=55.04;MQ0=8;MQRankSum=-4.430;QD=5.61;ReadPosRankSum=-1.950;VQSLOD=0.9537;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:28:55.87:0,56,386	0/0:8,0:8:14.91:0,15,109	1/1:15,0:8:2.45:14,2,0	0/0:13,0:4:5.51:0,6,37	1/1:15,9:21:17.96:155,18,0	0/1:12,1:14:3.26:3,0,133	0/0:17,0:20:44.89:0,45,302	0/1:13,4:14:12.89:49,0,13	1/1:7,10:12:15.01:141,15,0	0/0:23,0:24:43.69:0,44,311	0/0:30,1:32:11.39:0,11,253	0/1:12,3:15:19.38:141,0,19	0/0:13,0:13:20.83:0,21,153	1/1:5,7:10:12.01:112,12,0	0/0:20,0:21:32.74:0,33,241	0/0:11,0:11:23.85:0,24,175	0/0:44,0:45:93.12:0,93,715	0/1:15,1:16:41.56:42,0,108	1/1:6,8:12:2.12:178,2,0	0/1:15,3:17:65.76:66,0,67	0/1:6,0:6:0:0,0,0	0/0:9,0:9:17.85:0,18,129	0/0:13,0:12:23.84:0,24,173	0/0:10,0:10:20.88:0,21,153	0/0:13,0:12:14.34:0,14,96	1/1:8,11:17:29.99:278,30,0	0/1:11,10:21:16.79:168,0,17	0/1:8,3:11:29.82:72,0,30
chr10	91698336	.	AAATT	A	4910.17	PASS	AC=22;AF=0.458;AN=48;BaseQRankSum=12.926;DP=412;FS=11.424;HRun=0;HaplotypeScore=63.6304;InbreedingCoeff=0.9533;MQ=60.45;MQ0=2;MQRankSum=-0.036;QD=25.71;ReadPosRankSum=-0.018;VQSLOD=3.4828;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:69.22:0,69,1601	0/0:8,0:8:21.07:0,21,510	./.	./.	1/1:6,13:18:30:419,30,0	0/0:17,0:17:39.13:0,39,899	0/0:4,0:4:6.02:0,6,146	1/1:15,12:27:36.12:581,36,0	1/1:4,13:17:27.09:439,27,0	0/0:21,0:21:33.11:0,33,797	0/0:16,0:16:30.09:0,30,680	1/1:2,8:10:15.05:244,15,0	0/0:8,0:8:21.07:0,21,510	1/1:2,2:4:6.02:98,6,0	0/0:10,0:10:15.05:0,15,360	0/0:14,0:14:21.06:0,21,464	0/0:24,0:24:54.17:0,54,1263	0/0:19,0:19:36.12:0,36,874	1/1:8,14:22:41.94:550,42,0	1/1:5,11:16:30.02:488,30,0	1/1:5,8:13:21.07:342,21,0	./.	0/0:8,0:8:12.04:0,12,291	./.	0/0:23,0:23:60.18:0,60,1358	1/1:8,13:21:39.09:561,39,0	1/1:6,16:22:39.05:603,39,0	1/1:7,13:19:36.12:586,36,0
chr10	91700853	.	AACACACACACACACACAC	A	6354.58	PASS	AB=0.856;AC=25;AF=0.446;AN=56;BaseQRankSum=9.115;DP=450;FS=25.468;HRun=0;HaplotypeScore=190.1558;InbreedingCoeff=0.6714;MQ=53.99;MQ0=24;MQRankSum=-4.439;QD=26.26;ReadPosRankSum=2.147;VQSLOD=2.3525;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:21:3.24:136,3,0	0/0:4,0:4:2.04:0,2,6	0/0:14,0:5:6.02:0,6,103	0/0:17,0:8:12.04:0,12,202	1/1:11,7:16:15.01:604,15,0	0/0:18,0:18:33.11:0,33,2619	0/0:13,0:13:15.05:0,15,507	0/1:15,6:20:33.66:180,0,34	0/1:11,4:14:7.99:283,0,8	0/0:20,0:20:43.37:0,43,1927	0/0:17,0:16:18.95:0,19,1194	1/1:5,4:9:6.49:272,6,0	0/0:9,0:10:24.08:0,24,1402	1/1:7,1:9:6.02:272,6,0	1/1:17,0:17:15.52:629,16,0	0/0:17,0:17:30.10:0,30,1371	0/1:12,0:10:2.25:120,0,2	0/0:8,0:14:18.06:0,18,1423	1/1:8,7:14:11.98:216,12,0	1/1:8,15:22:32.95:1096,33,0	1/1:22,0:21:2.97:20,3,0	0/0:16,0:15:33.11:0,33,2425	0/0:9,0:9:15.05:0,15,893	0/0:17,0:25:24.08:0,24,1538	0/0:6,0:10:8.95:0,9,685	1/1:9,14:22:33.10:1106,33,0	1/1:11,5:14:27.07:982,27,0	1/1:8,7:12:9.03:439,9,0
chr10	91700875	.	CA	C	265.55	PASS	AB=0.817;AC=8;AF=0.143;AN=56;BaseQRankSum=9.884;DP=487;FS=4.382;HRun=1;HaplotypeScore=102.6803;InbreedingCoeff=0.5930;MQ=46.16;MQ0=38;MQRankSum=-7.954;QD=4.58;ReadPosRankSum=6.038;VQSLOD=0.7550;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,10:15:21.01:99,0,21	1/1:2,1:3:3.01:37,3,0	0/0:16,0:4:12.04:0,12,152	0/0:19,0:5:15.05:0,15,189	0/1:15,0:12:3.23:3,0,91	0/0:20,0:19:44.95:0,45,583	0/0:21,0:19:43.05:0,43,492	0/0:25,0:20:51.13:0,51,606	0/0:11,0:10:8.97:0,9,180	0/0:25,0:25:71.25:0,71,942	0/0:18,0:17:24.55:0,25,354	0/0:12,0:11:11.43:0,11,215	0/0:9,0:9:27.09:0,27,373	0/0:10,0:9:5.89:0,6,141	1/1:5,3:12:27.21:179,27,0	0/0:23,0:23:56.77:0,57,683	1/1:4,3:6:11.54:84,12,0	0/0:17,0:17:35.30:0,35,440	0/0:17,0:16:36.08:0,36,477	0/0:25,0:24:12.63:0,13,325	0/0:23,0:21:30.10:0,30,378	0/0:16,0:15:35.93:0,36,515	0/0:13,0:13:32.31:0,32,397	0/0:35,0:32:47.55:0,48,560	0/0:13,0:13:14.71:0,15,158	0/0:24,0:23:26.97:0,27,523	0/0:19,0:17:13.94:0,14,372	0/0:18,0:13:8.87:0,9,194
chr10	91700900	.	CCCA	C	131.63	PASS	AB=0.976;AC=6;AF=0.107;AN=56;BaseQRankSum=4.938;DP=567;FS=8.181;HRun=0;HaplotypeScore=133.7675;InbreedingCoeff=0.5103;MQ=60.67;MQ0=21;MQRankSum=-3.076;QD=1.83;ReadPosRankSum=2.055;VQSLOD=2.1529;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,1:19:7.72:41,0,8	0/0:5,0:5:3.11:0,3,8	0/0:31,0:18:50.83:0,51,927	0/1:26,0:14:15.65:16,0,473	0/0:15,0:15:33.03:0,33,566	0/0:21,0:21:58.55:0,59,1180	0/0:24,0:22:57.50:0,57,1168	0/0:31,0:27:66.23:0,66,1452	0/0:13,0:12:30.08:0,30,568	0/0:23,0:23:66.17:0,66,1382	0/0:19,0:18:36.12:0,36,749	0/0:16,0:16:39.09:0,39,795	0/0:10,0:10:30.10:0,30,618	0/0:10,0:10:20.98:0,21,382	1/1:9,5:13:17.89:171,18,0	0/0:21,0:21:51.17:0,51,1125	1/1:11,1:12:0.06:25,0,0	0/0:24,0:24:54.16:0,54,1061	0/0:25,0:25:69.22:0,69,1254	0/0:28,0:28:60.53:0,61,1063	0/0:25,0:24:51.17:0,51,1107	0/0:21,0:20:52:0,52,1048	0/0:20,0:20:50.73:0,51,1017	0/0:35,0:31:67.06:0,67,1357	0/0:20,0:19:34.45:0,34,690	0/0:29,0:29:72.16:0,72,1215	0/0:18,0:18:53.84:0,54,914	0/0:11,0:9:18.04:0,18,278
chr10	91700901	.	CCA	C	403.74	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.821;DP=570;FS=7.614;HRun=0;HaplotypeScore=124.1656;InbreedingCoeff=0.9609;MQ=61.63;MQ0=21;MQRankSum=-5.599;QD=7.92;ReadPosRankSum=3.811;VQSLOD=2.8883;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,14:19:14.87:115,15,0	1/1:1,4:5:8.86:90,9,0	0/0:32,0:19:52.05:0,52,661	0/0:27,0:15:31.20:0,31,360	0/0:16,0:16:35.98:0,36,420	0/0:20,0:20:48.16:0,48,771	0/0:23,0:21:54:0,54,786	0/0:33,0:29:72.22:0,72,1065	0/0:13,0:12:30.05:0,30,386	0/0:22,0:22:60.01:0,60,857	0/0:19,0:18:33.07:0,33,471	0/0:16,0:16:39.08:0,39,536	0/0:10,0:10:27.07:0,27,392	0/0:10,0:10:21.01:0,21,264	1/1:6,8:13:17.91:203,18,0	0/0:21,0:21:51.16:0,51,781	1/1:1,11:12:12.04:145,12,0	0/0:24,0:24:49.65:0,50,682	0/0:26,0:26:18.69:0,19,685	0/0:28,0:28:60.48:0,60,741	0/0:25,0:24:51.10:0,51,735	0/0:21,0:20:42.13:0,42,647	0/0:20,0:20:48.13:0,48,699	0/0:35,0:31:43.93:0,44,865	0/0:20,0:19:33.07:0,33,485	0/0:29,0:29:66.10:0,66,814	0/0:18,0:18:53.98:0,54,667	0/0:11,0:9:18.02:0,18,192
chr10	91701701	.	CA	C	6666.83	PASS	AC=48;AF=0.960;AN=50;BaseQRankSum=-0.470;DP=177;FS=5.468;HRun=1;HaplotypeScore=95.8796;InbreedingCoeff=0.3719;MQ=34.56;MQ0=0;MQRankSum=-1.732;QD=38.32;ReadPosRankSum=1.711;VQSLOD=5.2181;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:6:15.05:204,15,0	1/1:0,2:2:6.02:83,6,0	0/0:1,0:1:3.01:0,3,47	./.	1/1:0,12:12:17.98:227,18,0	1/1:0,9:9:27.09:376,27,0	1/1:0,4:4:12.04:167,12,0	1/1:0,7:7:18.06:247,18,0	1/1:0,3:3:9.03:125,9,0	1/1:0,15:15:45.15:628,45,0	1/1:0,7:7:18.06:248,18,0	1/1:0,6:6:15.05:204,15,0	1/1:0,8:8:24.08:334,24,0	1/1:0,7:7:21.07:292,21,0	1/1:0,4:4:12.04:167,12,0	1/1:0,2:2:6.02:84,6,0	1/1:0,4:4:12.04:167,12,0	1/1:0,2:2:6.02:84,6,0	1/1:0,2:2:6.02:83,6,0	1/1:0,10:10:30.10:411,30,0	./.	1/1:0,18:18:51.17:711,51,0	1/1:0,15:15:42.14:576,42,0	./.	1/1:0,17:17:48.16:669,48,0	1/1:0,7:7:21.07:288,21,0	1/1:0,6:6:18.06:251,18,0	1/1:0,1:1:3.01:42,3,0
chr10	91701711	.	CT	C	7805.91	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=-0.332;DP=198;FS=5.418;HRun=1;HaplotypeScore=106.8415;InbreedingCoeff=0.3501;MQ=38.49;MQ0=0;MQRankSum=-1.732;QD=39.83;ReadPosRankSum=0.590;VQSLOD=4.6281;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:6:18.06:251,18,0	1/1:0,2:2:6.02:84,6,0	0/0:1,0:2:3.01:0,3,48	./.	1/1:0,13:13:33.06:458,33,0	1/1:0,12:12:36.12:501,36,0	1/1:0,4:4:12.04:167,12,0	1/1:0,8:8:21.07:293,21,0	1/1:0,3:3:9.03:125,9,0	1/1:0,16:16:48.16:669,48,0	1/1:0,8:8:24.08:333,24,0	1/1:0,6:6:18.06:251,18,0	1/1:0,8:8:24.08:334,24,0	1/1:0,7:7:21.07:293,21,0	1/1:0,5:5:15.05:209,15,0	1/1:0,2:2:6.02:84,6,0	1/1:0,5:5:15.05:209,15,0	1/1:1,3:4:9.03:126,9,0	1/1:0,2:2:6.02:77,6,0	1/1:0,11:11:33.11:458,33,0	1/1:0,2:2:6.02:83,6,0	1/1:0,18:18:51.17:711,51,0	1/1:0,17:17:47.92:667,48,0	1/1:0,3:3:6.02:84,6,0	1/1:0,18:18:48.12:669,48,0	1/1:0,8:8:24.08:335,24,0	1/1:0,7:7:21.07:293,21,0	1/1:0,1:1:3.01:42,3,0
chr10	91701735	.	GT	G	932.87	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=2.581;DP=220;FS=6.608;HRun=1;HaplotypeScore=147.3024;InbreedingCoeff=0.4769;MQ=55.35;MQ0=0;MQRankSum=-5.026;QD=4.69;ReadPosRankSum=4.800;VQSLOD=0.5879;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:14.24:65,14,0	1/1:4,0:4:3.84:9,4,0	0/0:8,0:8:20.22:0,20,151	0/0:2,0:2:5.22:0,5,32	1/1:6,1:7:14.88:77,15,0	1/1:13,0:13:19.71:57,20,0	1/1:9,0:9:16.60:51,17,0	0/0:11,0:11:0.39:0,0,5	1/1:4,0:4:3.63:10,4,0	1/1:13,0:13:15.26:66,15,0	1/1:9,2:11:13.32:65,13,0	1/1:5,1:6:14.06:71,14,0	1/1:6,0:6:6.26:22,6,0	1/1:7,1:8:7.84:35,8,0	1/1:3,0:3:6.75:22,7,0	1/1:3,0:3:6.45:21,6,0	1/1:9,0:9:15.18:52,15,0	0/1:5,0:5:0.66:1,0,1	0/1:4,0:4:7.33:15,0,7	1/1:13,0:13:13.89:41,14,0	1/1:5,0:4:6.29:19,6,0	1/1:17,0:17:26.14:93,26,0	1/1:14,0:14:29.43:97,29,0	1/1:5,0:5:9.33:31,9,0	1/1:16,0:16:26.88:92,27,0	1/1:8,0:8:3.66:15,4,0	1/1:3,0:3:7.51:29,8,0	1/1:1,0:1:0.89:2,1,0
chr10	91702399	.	CTT	C	3584.93	PASS	AB=0.845;AC=25;AF=0.446;AN=56;BaseQRankSum=2.307;DP=528;FS=8.872;HRun=12;HaplotypeScore=74.8685;InbreedingCoeff=0.8494;MQ=74.55;MQ0=0;MQRankSum=1.243;QD=15.86;ReadPosRankSum=4.070;VQSLOD=2.0271;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,1:35:30.79:0,31,203	0/0:2,0:14:30.46:0,30,141	0/1:22,0:15:6.13:6,0,185	0/1:17,0:16:0.08:0,0,57	0/0:33,0:38:94.07:0,94,1195	1/1:2,17:19:32.81:388,33,0	1/1:4,13:19:32.51:298,33,0	0/0:25,0:27:56.43:0,56,740	0/0:15,0:19:50.09:0,50,625	1/1:4,11:15:26.98:275,27,0	1/1:1,15:17:41.80:409,42,0	0/0:11,0:14:36.03:0,36,419	1/1:2,11:13:33.06:336,33,0	0/0:16,0:16:44.94:0,45,613	0/1:2,1:15:4.55:5,0,70	1/1:2,12:16:26.53:308,27,0	0/0:4,0:30:64.79:0,65,251	1/1:5,10:16:29.78:286,30,0	0/0:26,0:26:57.18:0,57,811	0/0:13,0:13:29.57:0,30,373	0/0:18,0:18:48.15:0,48,696	1/1:3,12:15:33.05:336,33,0	1/1:3,16:20:44.81:439,45,0	1/1:1,9:10:24.05:244,24,0	1/1:2,9:12:26.78:256,27,0	0/0:21,0:22:50.63:0,51,669	0/0:14,0:15:32.38:0,32,365	0/0:14,0:15:41.62:0,42,568
chr10	91702775	.	C	CCT	1009.72	PASS	AB=0.989;AC=34;AF=0.739;AN=46;BaseQRankSum=-2.113;DP=676;FS=9.893;HRun=0;HaplotypeScore=109.6732;InbreedingCoeff=0.4189;MQ=66.87;MQ0=24;MQRankSum=0.515;QD=2.03;ReadPosRankSum=-2.652;VQSLOD=1.0712;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:17.96:0,18,138	0/0:9,0:8:2.90:0,3,16	./.	0/1:60,0:25:0:0,0,0	./.	./.	0/1:34,0:32:0:0,0,0	1/1:16,0:15:1.25:3,1,0	1/1:20,1:21:6:64,6,0	1/1:23,0:23:22.83:136,23,0	0/1:17,0:17:0:0,0,0	1/1:26,1:26:8.87:75,9,0	1/1:18,1:19:5.98:61,6,0	0/1:26,0:26:0.26:0,0,0	0/1:28,0:27:0:0,0,0	1/1:27,0:27:11.98:99,12,0	0/0:28,0:28:2.68:0,3,14	1/1:15,0:15:8.98:72,9,0	1/1:18,0:18:6.17:30,6,0	./.	0/1:30,1:29:8.37:97,0,8	./.	1/1:18,0:18:2.99:24,3,0	1/1:37,0:37:18.34:187,18,0	1/1:19,0:18:2.99:24,3,0	1/1:27,0:26:25.18:154,25,0	1/1:17,0:17:8.80:80,9,0	1/1:14,0:13:3.41:19,3,0
chr10	91702818	.	CTCTCTCTG	C	1010.26	PASS	AB=1.000;AC=12;AF=0.222;AN=54;BaseQRankSum=-0.359;DP=561;FS=2.647;HRun=0;HaplotypeScore=118.8161;InbreedingCoeff=0.0659;MQ=49.44;MQ0=23;MQRankSum=0.785;QD=4.86;ReadPosRankSum=-1.552;VQSLOD=2.1630;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:37:63.88:927,64,0	1/1:3,6:7:3.01:54,3,0	0/0:15,0:6:17.87:0,18,146	./.	0/0:18,0:18:26.87:0,27,258	0/1:11,0:11:21.41:21,0,171	0/0:27,0:25:44.90:0,45,617	0/1:16,0:15:8.36:8,0,316	0/1:21,0:21:12.12:12,0,459	0/1:22,0:21:69.72:70,0,743	0/1:9,0:9:34.50:35,0,120	0/1:24,0:23:1.74:2,0,406	0/0:17,0:17:6.27:0,6,379	0/0:25,0:24:38.76:0,39,500	0/0:23,0:22:2.94:0,3,23	0/0:18,0:18:39.06:0,39,737	0/1:40,0:40:17.36:21,0,17	0/0:12,0:11:20.97:0,21,333	0/0:13,0:12:2.57:0,3,328	0/0:18,0:18:2.16:0,2,260	0/0:37,0:33:8.77:0,9,671	0/1:17,0:17:1.32:1,0,270	0/0:16,0:16:23.98:0,24,269	0/0:46,0:43:61.77:0,62,1487	0/0:9,0:9:9:0,9,143	0/0:30,0:27:25.23:0,25,1245	0/0:14,0:14:26.59:0,27,442	0/0:11,0:10:25.82:0,26,201
chr10	91702820	.	CTCTCTG	C	852.53	PASS	AB=0.933;AC=11;AF=0.204;AN=54;BaseQRankSum=0.887;DP=566;FS=2.586;HRun=0;HaplotypeScore=107.3208;InbreedingCoeff=0.1041;MQ=50.66;MQ0=21;MQRankSum=3.299;QD=4.58;ReadPosRankSum=-0.767;VQSLOD=1.8611;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:36:80.64:747,81,0	1/1:8,0:7:3.01:36,3,0	0/0:17,0:7:7.72:0,8,133	./.	0/0:18,0:18:26.80:0,27,214	0/1:13,0:13:15.43:15,0,194	0/0:26,0:24:44.59:0,45,515	0/1:17,0:16:8.31:8,0,276	0/1:21,0:21:9.51:10,0,373	0/1:22,0:21:72.88:73,0,468	0/1:9,0:9:34.51:35,0,84	0/0:24,0:24:1.13:0,1,297	0/0:16,0:16:6.26:0,6,316	0/0:24,0:23:38.72:0,39,395	0/0:3,19:21:0:0,0,0	0/0:18,0:18:39.03:0,39,573	0/1:5,36:41:17.67:66,0,18	0/0:12,0:11:20.97:0,21,254	0/0:12,0:11:0.53:0,1,274	0/0:19,0:18:2.16:0,2,226	0/0:39,0:35:11.73:0,12,554	0/1:17,0:17:1.36:1,0,226	0/0:16,0:16:23.98:0,24,226	0/0:46,0:43:61.63:0,62,1108	0/0:11,0:11:14.99:0,15,166	0/0:31,0:28:28.13:0,28,944	0/0:14,0:14:22.83:0,23,301	0/0:11,0:10:24.16:0,24,185
chr10	91703304	.	CTCTCTCTTTTTTTTTTT	C	3078.30	PASS	AB=0.764;AC=19;AF=0.339;AN=56;BaseQRankSum=3.543;DP=371;FS=9.903;HRun=0;HaplotypeScore=133.0711;InbreedingCoeff=0.6524;MQ=57.41;MQ0=21;MQRankSum=-1.626;QD=26.77;ReadPosRankSum=4.023;VQSLOD=2.0403;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.13:0,42,1206	0/0:8,0:8:24.08:0,24,735	0/0:37,0:8:14.97:0,15,313	0/0:42,0:9:4.43:0,4,51	0/0:16,0:15:39.42:0,39,1053	1/1:7,13:20:9.37:517,9,0	0/1:4,11:14:14.78:361,0,15	0/0:18,0:16:42.07:0,42,821	0/0:9,0:9:24.06:0,24,557	1/1:3,0:19:29.38:729,29,0	1/1:9,0:9:23.86:362,24,0	0/0:7,0:7:15.11:0,15,414	0/1:6,0:5:15.45:40,0,15	0/0:8,0:8:18.06:0,18,571	0/0:14,0:13:38.33:0,38,908	1/1:4,4:8:7.63:216,8,0	0/0:17,0:17:25.63:0,26,620	1/1:5,0:5:3.36:115,3,0	0/0:13,0:10:27.06:0,27,636	0/0:12,0:12:33.08:0,33,774	0/0:2,0:2:6.02:0,6,146	0/1:3,0:5:1.84:199,0,2	1/1:3,4:8:15.05:414,15,0	1/1:1,5:5:2.40:141,2,0	1/1:13,0:13:8.98:173,9,0	0/0:18,0:17:45.99:0,46,967	0/0:12,0:12:32.14:0,32,824	0/0:7,0:7:6.02:0,6,199
chr10	91703305	.	TCTCTC	T	2375.18	PASS	AB=0.938;AC=21;AF=0.375;AN=56;BaseQRankSum=0.735;DP=366;FS=7.436;HRun=0;HaplotypeScore=76.6529;InbreedingCoeff=0.7781;MQ=55.86;MQ0=21;MQRankSum=-3.562;QD=21.40;ReadPosRankSum=-0.141;VQSLOD=2.4985;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:33.66:0,34,703	0/0:8,0:8:17.20:0,17,326	0/0:35,0:6:14.70:0,15,186	0/0:41,1:9:3.53:0,4,48	0/0:16,0:15:23.95:0,24,541	1/1:15,4:19:21.04:372,21,0	0/1:14,1:14:9.47:212,0,9	0/0:18,0:16:35.62:0,36,660	0/0:8,0:8:24.01:0,24,418	1/1:17,1:18:37.23:689,37,0	1/1:1,8:9:26.59:368,27,0	0/0:7,0:7:11.93:0,12,245	1/1:2,3:4:2.98:58,3,0	0/0:8,0:8:18.05:0,18,247	0/0:15,0:14:35.98:0,36,724	1/1:7,1:8:8.39:126,8,0	0/0:16,0:16:20.53:0,21,439	1/1:4,1:5:8.96:113,9,0	0/0:13,0:10:24:0,24,386	0/0:13,0:12:20.03:0,20,434	0/0:2,0:2:6.02:0,6,143	1/1:3,2:5:9.50:172,10,0	1/1:7,2:8:14.72:226,15,0	1/1:6,0:5:2.59:54,3,0	1/1:1,11:12:11.78:185,12,0	0/0:18,0:17:30.39:0,30,720	0/0:12,0:12:26.66:0,27,587	0/0:7,0:7:6.02:0,6,141
chr10	91703311	.	T	TCTC	2206.54	PASS	AB=1.000;AC=23;AF=0.426;AN=54;BaseQRankSum=-5.942;DP=333;FS=1.484;HRun=0;HaplotypeScore=67.2710;InbreedingCoeff=0.5870;MQ=48.88;MQ0=38;MQRankSum=1.676;QD=12.83;ReadPosRankSum=0.531;VQSLOD=3.0346;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:5.84:0,6,54	0/0:8,0:8:7.52:0,8,40	0/1:22,0:3:4.97:5,0,11	0/1:27,0:6:4.06:4,0,25	1/1:16,0:15:16.87:317,17,0	0/0:19,0:19:17.98:0,18,166	0/0:15,0:13:12.57:0,13,106	1/1:14,0:12:22.05:329,22,0	1/1:6,0:6:18.04:245,18,0	0/0:18,0:18:33.75:0,34,318	0/0:10,0:9:14.83:0,15,139	1/1:8,1:8:8.23:180,8,0	0/0:5,0:4:3.01:0,3,34	1/1:6,0:6:14.60:135,15,0	0/1:12,0:10:13.48:34,0,13	0/0:8,0:8:7.48:0,7,47	0/0:15,0:15:5.82:0,6,18	0/0:6,0:5:6.42:0,6,55	1/1:10,0:7:14.43:197,14,0	1/1:12,0:11:2.80:220,3,0	./.	0/0:6,0:6:10.24:0,10,93	0/0:10,0:8:6.10:0,6,102	0/0:13,0:5:2.79:0,3,21	0/0:12,0:12:11.24:0,11,102	1/1:17,0:16:10.23:404,10,0	1/1:11,1:10:20.05:267,20,0	1/1:4,4:6:1.96:56,2,0
chr10	91703431	.	CT	C	4387.64	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-3.946;DP=479;FS=0.000;HRun=10;HaplotypeScore=113.8078;InbreedingCoeff=0.9296;MQ=79.20;MQ0=5;MQRankSum=-0.411;QD=13.88;ReadPosRankSum=3.513;VQSLOD=4.6142;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:67.67:0,68,412	0/0:4,0:4:8.81:0,9,54	0/0:45,0:28:12.47:0,12,325	0/0:44,0:22:31.78:0,32,270	1/1:15,0:15:17.06:72,17,0	1/1:1,14:15:41.99:364,42,0	1/1:1,13:14:32.99:286,33,0	1/1:21,0:20:15.07:85,15,0	1/1:12,0:12:11.66:75,12,0	1/1:5,20:26:59.75:506,60,0	1/1:3,23:26:63.44:547,63,0	1/1:10,0:10:12.80:53,13,0	1/1:2,8:10:17.99:156,18,0	1/1:16,0:16:16.66:77,17,0	0/0:16,0:17:35.20:0,35,224	1/1:2,12:14:32.99:286,33,0	0/0:25,0:25:64.72:0,65,407	1/1:1,14:15:26.99:234,27,0	1/1:14,0:14:30.03:136,30,0	1/1:20,0:20:44.81:183,45,0	1/1:3,0:3:8.23:35,8,0	1/1:0,9:9:23.87:197,24,0	1/1:1,14:15:32.86:286,33,0	1/1:1,13:14:38.99:338,39,0	1/1:1,11:12:24:208,24,0	1/1:18,0:17:29.57:122,30,0	1/1:13,0:14:21.35:116,21,0	1/1:3,0:3:7.38:28,7,0
chr10	91703439	.	T	TA	3013.71	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=1.781;DP=461;FS=45.863;HRun=0;HaplotypeScore=114.0116;InbreedingCoeff=0.2850;MQ=81.50;MQ0=2;MQRankSum=0.964;QD=9.91;ReadPosRankSum=6.275;VQSLOD=1.8010;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:51.68:0,52,237	0/0:4,0:4:10:0,10,55	0/0:40,0:27:39.28:0,39,485	0/0:41,0:23:25.40:0,25,445	1/1:2,13:15:32.84:322,33,0	0/1:17,0:16:14.76:19,0,15	0/1:14,0:14:9.80:10,0,11	1/1:4,9:13:3.65:246,4,0	1/1:2,8:10:24.89:256,25,0	0/1:24,0:24:34.11:34,0,59	0/1:25,0:25:7.28:49,0,7	1/1:3,6:10:8.38:100,8,0	0/1:9,0:9:6.14:6,0,13	1/1:2,10:12:29.91:299,30,0	0/0:18,0:18:28.98:0,29,182	0/1:14,0:14:8.35:8,0,26	0/0:26,0:26:51.87:0,52,268	0/1:15,0:15:4.17:4,0,15	1/1:4,11:15:25.34:306,25,0	1/1:3,18:21:45.20:568,45,0	1/1:1,3:4:8.99:101,9,0	0/1:12,0:12:8.21:8,0,53	1/1:15,0:15:1.33:17,1,0	0/1:15,0:15:8.61:9,0,30	0/1:12,0:12:7.26:18,0,7	1/1:2,12:13:27.99:377,28,0	1/1:3,12:15:25.76:342,26,0	1/1:0,3:3:9.03:102,9,0
chr10	91703441	.	T	TA	8638.34	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.489;DP=466;FS=0.827;HRun=5;HaplotypeScore=97.2985;InbreedingCoeff=0.8528;MQ=80.58;MQ0=2;MQRankSum=-3.723;QD=22.32;ReadPosRankSum=4.139;VQSLOD=3.5495;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:69.22:867,69,0	1/1:0,4:4:11.95:130,12,0	0/0:41,0:27:18.50:0,18,252	0/0:38,0:23:4.64:0,5,239	1/1:16,0:17:38.87:376,39,0	1/1:17,0:16:47.26:304,47,0	1/1:14,0:14:35.24:216,35,0	1/1:16,0:16:37.99:370,38,0	1/1:10,0:10:26.91:279,27,0	1/1:25,0:25:65.78:474,66,0	1/1:24,0:24:67.44:416,67,0	1/1:9,0:10:15.03:168,15,0	1/1:9,0:9:20.68:133,21,0	1/1:10,0:11:29.98:316,30,0	1/1:2,15:18:33.08:392,33,0	1/1:14,0:14:38.32:251,38,0	1/1:1,25:26:63.20:792,63,0	1/1:15,0:15:29.21:175,29,0	1/1:13,0:15:41.25:392,41,0	1/1:21,0:22:57.10:638,57,0	1/1:4,0:4:12.02:129,12,0	1/1:13,0:13:32.49:218,32,0	1/1:15,0:15:35.45:226,35,0	1/1:15,0:15:44.14:274,44,0	1/1:13,0:13:26.73:182,27,0	1/1:15,0:14:39.02:424,39,0	1/1:15,0:15:36.01:391,36,0	1/1:3,0:3:9.03:106,9,0
chr10	91704565	.	CGG	C	4468.29	PASS	AB=0.760;AC=29;AF=0.558;AN=52;BaseQRankSum=2.282;DP=324;FS=6.112;HRun=2;HaplotypeScore=51.2365;InbreedingCoeff=0.8135;MQ=27.99;MQ0=80;MQRankSum=-2.193;QD=22.45;ReadPosRankSum=0.164;VQSLOD=2.7191;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,11:12:33.09:511,33,0	1/1:1,6:6:15.05:244,15,0	./.	./.	1/1:3,5:7:3.01:49,3,0	0/0:7,0:5:6.02:0,6,120	0/0:10,0:4:12.01:0,12,179	1/1:1,20:18:54.18:869,54,0	1/1:4,6:8:21.07:326,21,0	0/0:8,0:7:18.06:0,18,322	0/0:7,0:5:12.04:0,12,213	1/1:3,6:6:12.04:195,12,0	0/0:8,0:5:15.05:0,15,303	1/1:0,8:8:18.06:293,18,0	1/1:4,8:9:15.05:244,15,0	0/0:10,0:9:14.96:0,15,239	1/1:14,11:11:18.06:293,18,0	0/0:20,0:11:18.02:0,18,309	1/1:5,15:10:24.08:377,24,0	1/1:3,3:3:6.02:88,6,0	1/1:6,3:5:6.02:98,6,0	0/0:10,0:10:15.05:0,15,255	0/0:7,0:6:12.04:0,12,243	0/0:24,1:16:27.08:0,27,501	0/0:12,0:10:23.75:0,24,485	1/1:3,9:9:21.07:315,21,0	1/1:7,7:10:24.05:338,24,0	0/1:13,6:7:18.63:226,0,19
chr10	91704762	.	C	CATAAATAAATAAATAAATAA	6603.22	PASS	AB=0.667;AC=43;AF=0.935;AN=46;BaseQRankSum=-0.394;DP=218;FS=17.497;HRun=0;HaplotypeScore=94.8572;InbreedingCoeff=0.1400;MQ=55.62;MQ0=1;MQRankSum=-1.924;QD=35.31;ReadPosRankSum=1.183;VQSLOD=2.0314;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:13:17.06:197,0,17	1/1:2,0:3:2.98:21,3,0	./.	0/0:12,0:9:8.81:0,9,117	1/1:7,0:7:6.02:291,6,0	1/1:2,0:8:3.01:176,3,0	1/1:8,0:8:6.02:109,6,0	1/1:33,0:31:39.10:814,39,0	1/1:2,0:2:3.01:95,3,0	./.	./.	1/1:2,3:5:3.01:262,3,0	1/1:2,0:2:6.01:137,6,0	1/1:3,0:3:6.01:66,6,0	./.	1/1:5,0:5:9.03:501,9,0	1/1:10,0:21:17.98:282,18,0	1/1:16,0:16:18.02:445,18,0	1/1:20,0:16:27.06:681,27,0	1/1:2,0:2:6.02:332,6,0	1/1:5,0:5:12.04:343,12,0	./.	1/1:4,0:4:6.02:198,6,0	1/1:4,0:4:9.03:509,9,0	1/1:3,3:8:3.01:242,3,0	1/1:2,0:2:3.01:56,3,0	1/1:6,0:5:9.02:350,9,0	1/1:1,8:9:6.02:498,6,0
chr10	91704787	.	ACCTT	A	394.87	PASS	AB=0.822;AC=8;AF=0.143;AN=56;BaseQRankSum=4.201;DP=220;FS=5.568;HRun=0;HaplotypeScore=48.9781;InbreedingCoeff=-0.2192;MQ=60.63;MQ0=1;MQRankSum=-4.237;QD=4.65;ReadPosRankSum=1.338;VQSLOD=0.9061;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:24.08:0,24,623	0/0:4,0:4:12.04:0,12,319	0/0:5,0:3:6.02:0,6,99	0/0:15,0:10:10.24:0,10,379	0/0:3,0:3:9.03:0,9,255	0/0:8,0:8:6.02:0,6,174	0/0:3,0:3:9.03:0,9,246	0/1:27,4:30:59.43:59,0,1975	0/0:5,0:5:15.05:0,15,425	0/0:4,0:4:12.04:0,12,348	0/0:1,0:1:3.01:0,3,87	0/0:3,0:3:3.01:0,3,87	0/1:3,1:4:43.81:44,0,248	0/0:2,0:2:6.02:0,6,165	0/0:8,0:8:24.08:0,24,682	0/1:7,2:9:89.22:89,0,485	0/0:23,0:23:26.44:0,26,1306	0/1:10,2:12:89.76:90,0,578	0/1:13,2:14:78.92:79,0,913	0/0:4,0:4:12.04:0,12,338	0/1:4,1:5:28.68:29,0,331	0/0:2,1:3:6.02:0,6,174	0/1:2,2:4:98.83:99,0,162	0/1:4,1:5:38.80:39,0,290	0/0:8,0:8:15.05:0,15,417	0/0:5,0:5:15.05:0,15,427	0/0:7,0:7:21.07:0,21,607	0/0:10,0:9:21.06:0,21,545
chr10	91705312	.	CATATAT	C	5013.44	PASS	AB=0.633;AC=26;AF=0.464;AN=56;BaseQRankSum=-9.997;DP=429;FS=1.797;HRun=0;HaplotypeScore=117.4370;InbreedingCoeff=0.4590;MQ=53.62;MQ0=32;MQRankSum=-6.018;QD=18.57;ReadPosRankSum=-4.866;VQSLOD=2.4396;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:26:27.07:333,0,27	0/1:0,1:9:38.66:108,0,39	0/0:11,0:6:8.21:0,8,258	0/0:19,0:7:14.02:0,14,289	1/1:4,18:22:27.09:575,27,0	0/0:13,0:12:27.09:0,27,386	0/0:14,0:13:21.07:0,21,287	1/1:9,0:19:42.02:580,42,0	1/1:1,11:12:15.05:340,15,0	0/0:15,0:12:10.95:0,11,369	0/0:10,0:9:8.99:0,9,107	1/1:1,9:9:6.49:137,6,0	0/0:9,0:7:12.04:0,12,189	1/1:2,6:8:9.03:179,9,0	0/1:3,0:9:38.54:39,0,108	0/0:23,0:20:24.08:0,24,359	0/1:6,0:15:83.88:84,0,172	0/1:18,0:17:34.77:35,0,276	1/1:1,11:12:30.05:516,30,0	1/1:6,11:15:21.07:465,21,0	1/1:9,15:21:3.01:68,3,0	0/0:10,0:8:15.05:0,15,228	0/0:12,0:12:23.79:0,24,358	0/0:18,0:17:3.86:0,4,130	0/0:3,0:5:10.28:0,10,100	0/1:6,10:18:47.81:711,0,48	1/1:6,14:19:24.08:521,24,0	1/1:3,4:9:15.05:322,15,0
chr10	91705314	.	T	TAC	5354.25	PASS	AB=0.933;AC=46;AF=0.821;AN=56;BaseQRankSum=-3.365;DP=428;FS=4.263;HRun=0;HaplotypeScore=99.4625;InbreedingCoeff=0.5618;MQ=53.50;MQ0=32;MQRankSum=1.033;QD=14.13;ReadPosRankSum=3.674;VQSLOD=4.7515;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:31,1:27:33.38:277,33,0	1/1:11,0:10:14.99:76,15,0	0/0:10,0:5:12.04:0,12,169	0/0:19,0:7:15.91:0,16,189	0/1:21,1:21:7:7,0,13	1/1:0,13:13:27.09:495,27,0	1/1:2,13:14:21.07:385,21,0	1/1:19,0:16:27.06:315,27,0	0/0:11,0:11:0.79:0,1,1	1/1:0,15:13:28.57:472,29,0	1/1:1,9:9:9.03:165,9,0	1/1:10,0:9:0.93:2,1,0	1/1:1,8:8:12.04:217,12,0	0/0:8,1:8:2.79:0,3,13	1/1:10,1:9:23.47:136,23,0	1/1:2,21:20:24.08:438,24,0	1/1:17,3:18:31.24:302,31,0	1/1:0,18:17:24.08:422,24,0	1/1:11,0:11:13.24:122,13,0	1/1:14,2:14:7.01:60,7,0	1/1:22,2:19:3:25,3,0	1/1:0,10:9:15.05:274,15,0	1/1:0,12:12:24.08:438,24,0	1/1:1,17:17:12.51:220,13,0	1/1:2,2:5:11.11:130,11,0	1/1:20,2:17:28.74:276,29,0	0/1:18,2:18:6.90:21,0,7	1/1:9,0:9:9.38:80,9,0
chr10	91705998	.	GT	G	12040.93	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.087;DP=475;FS=9.504;HRun=6;HaplotypeScore=47.0146;InbreedingCoeff=0.9851;MQ=76.15;MQ0=2;MQRankSum=-6.091;QD=26.94;ReadPosRankSum=4.275;VQSLOD=4.5816;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:66.17:709,66,0	1/1:0,7:7:21.05:226,21,0	0/0:13,0:12:33.09:0,33,409	0/0:14,0:12:27.08:0,27,336	1/1:3,16:19:45.11:483,45,0	1/1:0,21:21:60.15:644,60,0	1/1:0,11:11:30.08:322,30,0	1/1:6,38:44:99:1214,114,0	1/1:1,15:16:32.95:355,33,0	1/1:0,18:18:54.14:580,54,0	1/1:0,23:22:51.13:548,51,0	1/1:0,13:13:27.07:290,27,0	1/1:0,17:17:41.96:451,42,0	1/1:0,19:19:54.14:580,54,0	1/1:0,12:12:30.08:322,30,0	1/1:1,10:11:27.07:290,27,0	1/1:3,19:21:42.10:451,42,0	1/1:1,14:15:36.09:387,36,0	1/1:6,24:30:72.18:771,72,0	1/1:0,13:13:33.08:355,33,0	1/1:1,9:10:24.06:258,24,0	1/1:0,9:9:27.07:289,27,0	1/1:0,12:12:30.08:322,30,0	1/1:1,7:8:15.03:161,15,0	1/1:0,13:13:33.08:354,33,0	1/1:2,19:21:57.14:612,57,0	1/1:1,24:25:66.16:709,66,0	1/1:1,14:15:33.08:355,33,0
chr10	91706321	.	CGT	C	1351.27	PASS	AB=0.892;AC=26;AF=0.619;AN=42;BaseQRankSum=-2.012;DP=333;FS=39.724;HRun=0;HaplotypeScore=53.9235;InbreedingCoeff=0.0069;MQ=37.81;MQ0=31;MQRankSum=3.285;QD=8.61;ReadPosRankSum=-3.249;VQSLOD=0.7471;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:7:9.03:124,9,0	./.	0/0:60,1:13:3.94:0,4,366	0/0:68,2:12:35.59:0,36,414	./.	0/1:11,1:12:75.79:76,0,88	0/1:15,0:14:38.43:38,0,205	./.	1/1:2,0:2:3:26,3,0	0/1:10,1:10:63.64:64,0,219	0/0:16,2:18:11.61:0,12,134	1/1:1,0:1:3.01:40,3,0	0/1:6,3:9:79.72:80,0,95	./.	./.	0/1:13,1:14:99:115,0,135	1/1:7,0:7:11.95:145,12,0	0/1:11,1:11:99:109,0,166	./.	1/1:4,0:4:9.02:109,9,0	1/1:10,1:8:18.05:232,18,0	1/1:15,0:13:12.01:146,12,0	0/1:11,3:13:77.21:77,0,80	0/1:16,3:18:30.75:31,0,160	0/0:10,1:11:12.04:0,12,177	./.	1/1:1,1:2:3.01:40,3,0	1/1:0,1:1:3.01:46,3,0
chr10	91706333	.	CATATGT	C	238.31	PASS	AB=0.892;AC=5;AF=0.139;AN=36;BaseQRankSum=3.683;DP=338;FS=9.954;HRun=0;HaplotypeScore=77.2055;InbreedingCoeff=0.0655;MQ=30.42;MQ0=39;MQRankSum=0.045;QD=5.42;ReadPosRankSum=-3.008;VQSLOD=0.0791;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:2:0:0,0,0	./.	0/0:81,0:16:46.59:0,47,1051	0/0:94,0:15:45.15:0,45,1156	./.	0/0:11,1:12:5.71:0,6,219	0/0:15,0:15:15.05:0,15,550	0/0:2,0:1:3.01:0,3,87	./.	0/1:8,1:9:59.60:60,0,638	0/0:17,0:17:12.98:0,13,386	./.	0/1:9,2:10:99:140,0,255	./.	./.	0/0:12,0:12:13.56:0,14,465	0/0:1,0:1:3.01:0,3,48	0/1:12,1:11:76.37:76,0,483	./.	./.	0/0:7,0:3:2.82:0,3,61	1/1:11,0:10:2.91:62,3,0	0/0:12,1:12:9.81:0,10,238	0/0:17,1:17:11.78:0,12,439	0/0:9,1:10:12.04:0,12,440	./.	./.	0/0:1,0:1:2.98:0,3,22
chr10	91706361	.	CAT	C	883.07	PASS	AB=0.944;AC=19;AF=0.475;AN=40;BaseQRankSum=-3.980;DP=265;FS=7.350;HRun=0;HaplotypeScore=48.1658;InbreedingCoeff=0.1114;MQ=35.25;MQ0=31;MQRankSum=4.217;QD=4.75;ReadPosRankSum=1.798;VQSLOD=0.9880;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:5:0:0,0,0	./.	0/1:31,0:8:8.45:10,0,8	0/0:45,0:8:3.93:0,4,54	./.	0/1:12,0:12:0.65:18,0,1	1/1:25,0:24:20.68:193,21,0	0/1:4,0:2:5.12:17,0,5	./.	1/1:2,6:8:7.24:100,7,0	0/1:14,0:13:2.29:102,0,2	./.	1/1:9,0:8:8.93:66,9,0	./.	./.	0/1:15,0:14:3.88:76,0,4	0/1:4,0:3:5.82:6,0,13	0/1:12,0:10:12.74:99,0,13	0/0:4,0:1:2.74:0,3,12	./.	0/0:10,0:4:4.22:0,4,23	0/1:0,7:7:0.08:0,0,0	0/1:12,0:11:23.11:36,0,23	1/1:21,0:19:20.91:163,21,0	1/1:12,0:10:14.96:119,15,0	0/0:3,0:1:2.74:0,3,12	./.	0/0:1,0:1:2.22:0,2,7
chr10	91706883	.	AGG	A	8708.48	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.506;DP=523;FS=4.462;HRun=10;HaplotypeScore=99.1835;InbreedingCoeff=0.8318;MQ=68.94;MQ0=25;MQRankSum=3.322;QD=21.29;ReadPosRankSum=6.293;VQSLOD=3.9810;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,19:29:65.92:688,66,0	1/1:3,3:6:15.04:167,15,0	0/0:53,0:19:44.23:0,44,470	0/0:59,0:22:6.49:0,6,109	1/1:10,7:17:30.04:330,30,0	1/1:7,7:13:21.03:233,21,0	1/1:7,18:24:51.10:559,51,0	1/1:7,8:14:4.57:236,5,0	1/1:9,4:12:21.89:261,22,0	1/1:12,8:20:30.03:321,30,0	1/1:5,6:11:21.05:234,21,0	1/1:7,9:16:39.09:434,39,0	1/1:5,5:8:18:198,18,0	1/1:7,12:19:51.13:566,51,0	1/1:6,12:17:36.09:401,36,0	1/1:6,10:16:19.27:320,19,0	1/1:2,14:16:43.32:446,43,0	1/1:1,8:9:27.07:301,27,0	1/1:8,3:11:18.02:192,18,0	1/1:9,8:16:33.97:366,34,0	1/1:8,11:16:27.03:291,27,0	1/1:5,8:13:23.70:243,24,0	1/1:8,9:18:33.07:365,33,0	1/1:5,15:20:38.51:390,39,0	1/1:4,5:9:12.03:134,12,0	1/1:11,9:19:35.08:374,35,0	1/1:6,13:18:48.11:525,48,0	1/1:5,2:4:12.03:133,12,0
chr10	91706901	.	G	GGA	2954.06	PASS	AB=0.985;AC=38;AF=0.731;AN=52;BaseQRankSum=-3.091;DP=517;FS=10.111;HRun=0;HaplotypeScore=127.4981;InbreedingCoeff=0.1707;MQ=53.72;MQ0=38;MQRankSum=0.834;QD=6.95;ReadPosRankSum=-1.440;VQSLOD=2.1665;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:17:0.01:0,0,0	./.	0/0:55,0:15:5.74:0,6,63	0/1:59,0:13:4.98:5,0,16	1/1:11,0:12:15.05:221,15,0	0/0:12,0:10:0.47:0,0,1	1/1:20,0:19:0.02:3,0,0	0/1:21,0:19:30.96:250,0,31	1/1:15,2:16:23.03:300,23,0	1/1:15,0:13:3.16:9,3,0	./.	1/1:16,2:18:6:290,6,0	0/1:13,0:12:1.14:2,0,1	1/1:20,2:22:28.80:451,29,0	0/1:15,0:14:7.71:17,0,8	1/1:18,0:17:1.73:13,2,0	0/0:9,0:9:0.67:0,1,2	1/1:9,0:10:5.52:22,6,0	1/1:12,0:11:18.76:181,19,0	0/1:20,1:19:10.45:217,0,10	1/1:23,0:19:14.85:152,15,0	1/1:14,0:13:3.22:13,3,0	1/1:12,0:13:4.98:25,5,0	1/1:19,0:18:2.03:5,2,0	0/1:7,0:6:0:0,0,0	1/1:20,1:19:36.07:406,36,0	0/1:22,2:23:27.95:382,0,28	1/1:13,0:6:12.02:108,12,0
chr10	91706954	.	G	GATAGATAGAT	3044.24	PASS	AB=0.947;AC=16;AF=0.286;AN=56;BaseQRankSum=6.439;DP=542;FS=6.725;HRun=0;HaplotypeScore=203.0259;InbreedingCoeff=0.3428;MQ=50.86;MQ0=11;MQRankSum=-4.695;QD=13.29;ReadPosRankSum=1.385;VQSLOD=1.3328;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:37.68:0,38,774	0/0:5,0:5:12.02:0,12,244	0/0:18,0:12:31.81:0,32,607	0/0:25,0:10:23.89:0,24,395	0/0:21,0:21:35.77:0,36,648	0/1:18,0:17:7.61:164,0,8	1/1:6,0:6:5.97:96,6,0	0/0:24,0:24:66.67:0,67,844	0/1:15,0:15:17.41:17,0,483	0/1:27,0:27:43.01:849,0,43	1/1:13,0:13:9.03:223,9,0	0/0:16,0:16:30.09:0,30,639	0/1:16,0:16:21.27:285,0,21	0/0:22,0:22:54.29:0,54,1128	0/0:20,0:20:48.62:0,49,1060	1/1:22,0:22:19.26:409,19,0	0/0:10,0:10:17.84:0,18,349	0/1:21,0:21:8.58:581,0,9	0/0:19,0:18:38.40:0,38,775	0/0:25,0:24:52.97:0,53,1099	0/0:21,0:20:29.68:0,30,558	0/1:6,12:20:0.04:0,0,0	0/1:23,0:23:27.01:234,0,27	0/1:17,0:16:8.16:205,0,8	1/1:29,0:27:6.49:149,6,0	0/0:35,0:34:97.39:0,97,1717	0/0:22,0:21:52.89:0,53,720	0/0:12,0:10:21.95:0,22,392
chr10	91707222	.	CT	C	5613.40	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.514;DP=545;FS=11.967;HRun=12;HaplotypeScore=96.5201;InbreedingCoeff=0.8282;MQ=67.97;MQ0=1;MQRankSum=-2.021;QD=10.73;ReadPosRankSum=1.653;VQSLOD=3.0490;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:31:70.77:538,71,0	1/1:3,2:6:11.33:78,11,0	0/0:19,0:14:22.72:0,23,143	0/0:3,0:3:2.53:0,3,25	1/1:5,21:26:53.29:395,53,0	1/1:1,0:19:26.48:77,26,0	1/1:1,0:10:16.29:47,16,0	1/1:12,19:32:55.96:412,56,0	1/1:3,10:14:25.64:190,26,0	1/1:8,0:32:47.99:147,48,0	1/1:6,0:16:16.26:47,16,0	1/1:4,7:11:17.91:137,18,0	1/1:2,0:20:34.63:101,35,0	1/1:3,12:15:29.87:229,30,0	1/1:1,18:19:41.84:323,42,0	1/1:2,0:22:28.51:82,29,0	1/1:8,15:23:56.94:400,57,0	1/1:0,0:17:24.44:70,24,0	1/1:5,11:16:29.83:204,30,0	1/1:4,25:29:65.29:496,65,0	1/1:3,5:8:11.94:92,12,0	1/1:2,0:19:28.50:82,29,0	1/1:5,0:19:18.31:53,18,0	1/1:2,0:11:14.25:41,14,0	1/1:4,0:25:26.47:77,26,0	1/1:4,27:33:83.50:589,84,0	1/1:7,23:31:53.11:437,53,0	1/1:1,16:18:26.59:269,27,0
chr10	91707845	.	AAC	A	685.35	PASS	AB=0.937;AC=19;AF=0.339;AN=56;BaseQRankSum=3.866;DP=387;FS=3.361;HRun=0;HaplotypeScore=114.3179;InbreedingCoeff=0.0380;MQ=44.03;MQ0=31;MQRankSum=-6.232;QD=3.65;ReadPosRankSum=-0.118;VQSLOD=2.1748;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:11:11.94:81,12,0	1/1:7,0:7:14.05:96,14,0	0/0:48,0:10:7.13:0,7,337	0/0:35,0:10:26.47:0,26,302	0/0:17,0:16:26.73:0,27,352	0/1:12,2:11:39.40:39,0,80	0/0:13,0:13:18.93:0,19,161	0/1:20,0:19:85.03:85,0,322	0/1:10,0:10:2.39:2,0,114	0/1:14,2:15:53.35:72,0,53	0/1:9,1:10:24.39:24,0,74	0/0:5,0:5:6.78:0,7,104	0/1:10,0:10:8.44:8,0,50	0/0:5,0:5:1.71:0,2,50	1/1:13,0:13:29.24:217,29,0	0/1:10,1:10:38.73:39,0,57	1/1:14,0:14:0.87:98,1,0	0/1:9,1:10:16.01:16,0,51	0/0:16,0:14:10:0,10,135	0/0:14,0:14:7.13:0,7,193	0/0:5,0:4:12.04:0,12,170	0/0:6,1:7:7.86:0,8,100	0/0:9,0:8:8.20:0,8,48	0/0:8,1:9:12.96:0,13,116	0/1:10,3:13:58.17:58,0,123	0/1:12,0:10:8.71:9,0,173	0/1:16,0:16:5:5,0,154	0/0:15,0:12:21.26:0,21,370
chr10	91707847	.	C	CA	2591.26	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-1.429;DP=443;FS=5.346;HRun=5;HaplotypeScore=143.4180;InbreedingCoeff=0.3091;MQ=43.98;MQ0=31;MQRankSum=0.342;QD=8.52;ReadPosRankSum=-1.860;VQSLOD=0.0219;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:13:2.96:23,3,0	1/1:7,0:7:5.89:26,6,0	0/0:50,0:10:18.51:0,19,189	0/0:40,0:11:1.26:0,1,100	0/0:18,0:17:15.99:0,16,144	1/1:11,3:11:33.03:351,33,0	1/1:10,4:14:22.98:201,23,0	0/1:23,0:22:66.77:129,0,67	0/1:14,0:14:15.73:16,0,54	1/1:14,2:15:32.73:373,33,0	1/1:11,3:14:23.63:233,24,0	0/0:9,0:9:0.54:0,1,39	1/1:2,8:10:14.10:158,14,0	0/1:7,0:7:3.64:4,0,17	1/1:18,0:18:4.22:39,4,0	1/1:10,2:11:9.13:144,9,0	1/1:19,0:19:1.13:41,1,0	1/1:9,1:10:19.41:204,19,0	0/1:17,0:15:19.15:19,0,52	0/1:16,0:16:5.51:6,0,64	0/0:5,0:4:11.87:0,12,82	1/1:5,3:8:13.01:112,13,0	1/1:11,0:10:21.44:231,21,0	1/1:9,0:9:8.94:95,9,0	1/1:10,5:15:31.41:301,31,0	0/1:19,0:17:44.40:54,0,44	0/1:17,0:17:8.33:8,0,59	0/0:17,0:14:13.58:0,14,178
chr10	91707851	.	AACC	A	5145.35	PASS	AB=0.985;AC=45;AF=0.804;AN=56;BaseQRankSum=0.471;DP=437;FS=17.677;HRun=0;HaplotypeScore=119.8335;InbreedingCoeff=0.2469;MQ=40.27;MQ0=35;MQRankSum=-4.886;QD=15.04;ReadPosRankSum=-0.182;VQSLOD=3.5051;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,4:14:29.93:308,30,0	1/1:4,2:6:15.01:180,15,0	0/0:54,0:9:19.61:0,20,272	0/0:41,0:9:20.11:0,20,199	0/1:18,0:17:42:121,0,42	1/1:14,0:11:6.19:95,6,0	1/1:13,0:13:26.78:235,27,0	0/1:19,1:19:0.38:334,0,0	1/1:13,1:14:18.02:245,18,0	1/1:18,0:16:6.90:139,7,0	1/1:12,0:12:15.17:139,15,0	1/1:10,0:9:7.97:122,8,0	0/1:9,0:9:6.96:45,0,7	1/1:6,1:7:0.80:138,1,0	1/1:15,1:16:48.02:513,48,0	1/1:11,0:10:10.69:129,11,0	1/1:18,1:19:50.89:508,51,0	1/1:11,0:11:9.72:160,10,0	1/1:15,2:15:20.32:329,20,0	1/1:12,3:15:16.07:271,16,0	0/1:5,0:4:2.35:2,0,16	1/1:5,0:5:8.89:64,9,0	0/1:10,0:9:6.93:64,0,7	0/1:5,0:5:2.93:26,0,3	1/1:17,0:16:29.28:281,29,0	1/1:19,0:17:11.93:327,12,0	1/1:16,3:19:15.39:270,15,0	0/1:16,1:14:49.80:99,0,50
chr10	91707852	.	ACC	A	5494.43	PASS	AB=0.923;AC=46;AF=0.821;AN=56;BaseQRankSum=0.556;DP=434;FS=19.179;HRun=2;HaplotypeScore=111.3351;InbreedingCoeff=0.2863;MQ=39.71;MQ0=35;MQRankSum=-4.052;QD=16.35;ReadPosRankSum=0.685;VQSLOD=1.0643;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,3:13:30.01:330,30,0	1/1:4,2:6:15.01:174,15,0	0/0:53,2:9:20.43:0,20,275	0/0:42,1:8:20.10:0,20,183	0/1:15,2:16:18.19:135,0,18	1/1:14,0:11:5.69:66,6,0	1/1:10,1:12:28.09:236,28,0	1/1:14,6:19:1.32:365,1,0	1/1:10,4:14:26.71:343,27,0	1/1:18,1:16:5.90:98,6,0	1/1:9,3:12:14.90:128,15,0	1/1:7,3:9:14.89:156,15,0	0/1:8,1:9:6.87:45,0,7	1/1:3,4:7:9.95:180,10,0	1/1:3,13:16:48.09:565,48,0	1/1:9,2:10:9.44:103,9,0	1/1:9,8:17:47.74:495,48,0	1/1:9,2:11:10.09:160,10,0	1/1:7,9:14:21.81:352,22,0	1/1:8,6:14:20.58:323,21,0	0/1:5,0:4:2.35:2,0,16	1/1:5,0:5:8.80:64,9,0	0/1:9,1:9:6.93:63,0,7	0/1:4,1:5:2.94:20,0,3	1/1:15,0:14:31.28:239,31,0	1/1:9,10:17:19.14:416,19,0	1/1:17,4:21:23.78:321,24,0	0/1:17,0:14:25.68:114,0,26
chr10	91707859	.	A	ACC	1249.82	PASS	AB=0.969;AC=24;AF=0.429;AN=56;BaseQRankSum=-1.737;DP=506;FS=17.342;HRun=0;HaplotypeScore=141.8040;InbreedingCoeff=-0.5097;MQ=46.03;MQ0=36;MQRankSum=-2.076;QD=3.32;ReadPosRankSum=0.262;VQSLOD=1.9101;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:14:44.92:45,0,47	1/1:6,0:6:4.10:58,4,0	0/0:74,0:14:16.59:0,17,181	0/1:58,0:14:5.25:5,0,48	0/0:20,0:19:20.43:0,20,252	0/1:14,1:12:99:124,0,155	0/1:13,0:13:59.46:59,0,70	0/1:25,0:24:99:152,0,168	0/1:14,0:14:4.80:5,0,172	0/1:19,3:19:99:114,0,176	0/1:12,1:13:69.70:147,0,70	0/0:12,0:11:26.22:0,26,229	0/0:6,0:6:9.55:0,10,64	0/1:9,0:9:8.06:8,0,46	0/1:17,0:17:54.51:55,0,86	0/1:11,1:11:56.13:56,0,124	0/1:21,0:21:51.45:51,0,194	0/1:14,0:14:47.25:47,0,184	0/1:19,0:16:39.27:39,0,178	0/1:16,0:16:21.02:21,0,131	0/0:2,0:1:3.01:0,3,46	1/1:5,1:6:0.70:74,1,0	0/1:8,2:9:54.34:54,0,151	0/1:6,0:6:9.88:26,0,10	0/1:15,2:16:96.66:149,0,97	0/1:23,0:21:82:82,0,194	0/1:23,0:23:32.07:32,0,117	0/0:16,0:13:14.54:0,15,270
chr10	91707860	.	A	ACC	618.45	PASS	AB=0.992;AC=19;AF=0.339;AN=56;BaseQRankSum=-2.234;DP=513;FS=2.803;HRun=0;HaplotypeScore=146.8861;InbreedingCoeff=-0.3667;MQ=45.61;MQ0=36;MQRankSum=-1.156;QD=2.21;ReadPosRankSum=-0.424;VQSLOD=2.7513;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:14:8.14:36,0,8	0/1:6,0:6:8.49:33,0,8	0/0:77,0:14:19.88:0,20,203	0/0:60,0:15:0.61:0,1,93	0/0:20,0:19:21.20:0,21,209	0/1:15,0:12:1.85:2,0,238	0/1:12,1:13:54.09:115,0,54	0/1:27,0:26:58.64:59,0,179	0/0:14,0:14:14.57:0,15,169	0/1:20,0:17:44.28:44,0,208	0/1:12,1:13:60.47:60,0,94	0/0:12,0:11:24.38:0,24,191	0/0:6,0:6:6.95:0,7,57	0/0:9,0:9:13.89:0,14,80	0/1:17,0:17:47.42:50,0,47	0/1:12,0:11:12.60:13,0,173	0/1:21,0:21:42.15:42,0,164	0/1:14,0:14:29.90:30,0,210	0/1:18,0:15:25.43:25,0,156	0/0:15,0:15:4.39:0,4,109	0/0:2,0:1:3.01:0,3,45	0/1:8,0:8:9.01:41,0,9	0/1:11,0:10:5.26:5,0,168	1/1:2,3:5:2.17:96,2,0	0/1:20,0:19:34.18:34,0,166	0/1:22,0:20:78.92:79,0,113	0/1:22,0:22:1.83:2,0,81	0/0:16,0:13:23.55:0,24,263
chr10	91707862	.	A	ACC	2310.89	PASS	AB=0.798;AC=18;AF=0.333;AN=54;BaseQRankSum=-3.166;DP=515;FS=25.826;HRun=0;HaplotypeScore=144.2827;InbreedingCoeff=0.0437;MQ=47.85;MQ0=36;MQRankSum=-1.361;QD=9.51;ReadPosRankSum=2.792;VQSLOD=1.7539;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,3:13:5.80:149,6,0	0/1:5,1:6:26.97:63,0,27	0/0:82,0:14:20.28:0,20,207	0/0:66,0:17:9.67:0,10,142	0/1:7,1:19:75.03:178,0,75	0/0:15,0:12:35.61:0,36,406	0/1:13,0:13:7.80:8,0,147	0/1:19,8:26:96.22:343,0,96	0/1:11,2:14:44.55:84,0,45	0/0:19,0:16:36.48:0,36,379	0/0:13,0:13:34.45:0,34,329	0/1:9,3:11:39.41:39,0,68	0/0:6,0:6:11.83:0,12,128	1/1:5,4:9:20.62:175,21,0	1/1:11,6:17:7.96:245,8,0	0/0:13,0:12:26.28:0,26,278	0/1:16,4:20:27.31:213,0,27	0/0:14,0:14:28.49:0,28,370	0/1:14,2:13:99:133,0,107	0/1:8,4:14:0.50:206,0,1	./.	0/0:7,0:7:17.48:0,17,143	0/0:11,0:10:26.39:0,26,247	0/0:5,0:5:5.89:0,6,47	0/0:20,0:19:49.06:0,49,464	0/1:18,4:20:1.67:377,0,2	0/1:5,4:22:18.96:168,0,19	0/1:14,1:13:94.59:95,0,107
chr10	91707863	.	A	ACC	553.15	PASS	AB=0.973;AC=13;AF=0.232;AN=56;BaseQRankSum=-2.131;DP=517;FS=32.069;HRun=0;HaplotypeScore=144.0619;InbreedingCoeff=-0.0700;MQ=47.63;MQ0=37;MQRankSum=-0.523;QD=2.71;ReadPosRankSum=2.004;VQSLOD=1.3770;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,1:13:7.73:8,0,40	0/0:6,0:6:3.07:0,3,45	0/0:83,0:15:10.31:0,10,218	0/0:67,0:16:7.60:0,8,106	0/1:20,0:19:38.55:39,0,101	0/0:15,0:12:36.05:0,36,411	0/0:12,1:13:15.77:0,16,268	0/1:26,2:27:99:178,0,133	0/1:13,1:14:32.19:32,0,96	0/0:18,0:15:37.78:0,38,402	0/0:13,0:13:38.39:0,38,379	0/1:12,0:11:8.72:9,0,48	0/0:6,0:6:12.03:0,12,141	0/1:8,0:9:0.95:35,0,1	0/1:17,0:17:55.30:55,0,69	0/0:13,0:12:26.62:0,27,270	0/1:20,0:20:18.24:18,0,117	0/0:14,0:14:38.11:0,38,431	0/1:17,0:14:37.13:37,0,122	1/1:13,1:14:11.44:139,11,0	0/0:2,0:1:0.47:0,0,1	0/0:7,0:7:20.80:0,21,203	0/0:10,0:9:26.98:0,27,287	0/0:5,0:5:11.58:0,12,88	0/0:20,0:19:53.91:0,54,565	0/1:22,0:20:26.21:109,0,26	0/0:21,0:21:0.52:0,1,81	0/1:16,0:13:43.96:44,0,48
chr10	91707879	.	ACAAC	A	930.58	PASS	AB=0.967;AC=20;AF=0.357;AN=56;BaseQRankSum=4.419;DP=466;FS=6.186;HRun=0;HaplotypeScore=138.4972;InbreedingCoeff=-0.4085;MQ=57.44;MQ0=18;MQRankSum=-4.164;QD=3.14;ReadPosRankSum=5.418;VQSLOD=1.8078;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:10.62:0,11,344	0/0:4,0:4:8.32:0,8,128	0/0:78,0:22:24.98:0,25,344	0/1:55,0:15:13.20:13,0,116	0/1:15,0:15:0.82:1,0,457	0/1:9,0:9:87.35:87,0,139	0/1:12,2:14:41.05:41,0,254	0/0:18,0:17:8.17:0,8,752	0/1:15,0:15:12.57:13,0,221	0/1:16,0:14:99:140,0,274	0/1:14,1:15:51.94:52,0,299	0/0:15,0:14:15.66:0,16,345	0/1:5,0:6:56.60:92,0,57	0/0:13,0:13:15.52:0,16,286	0/1:17,0:17:58.59:59,0,357	0/1:8,1:9:55.43:55,0,86	0/1:20,1:21:70.67:71,0,454	0/1:15,1:16:99:187,0,299	0/0:15,0:14:39.68:0,40,580	0/1:13,0:13:10.93:11,0,303	1/1:1,0:1:3.01:32,3,0	0/1:7,0:7:13.43:13,0,166	0/1:8,0:8:63.45:73,0,63	0/0:4,0:4:11.88:0,12,162	0/1:19,1:19:99:133,0,166	0/1:19,0:19:10.99:11,0,583	0/1:18,0:18:1.26:1,0,294	0/0:8,0:8:11.11:0,11,374
chr10	91711181	.	A	ACC	4018.66	PASS	AB=0.792;AC=22;AF=0.393;AN=56;BaseQRankSum=-8.369;DP=278;FS=2.350;HRun=7;HaplotypeScore=35.7835;InbreedingCoeff=0.7776;MQ=83.40;MQ0=1;MQRankSum=-3.491;QD=34.06;ReadPosRankSum=0.474;VQSLOD=2.8683;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.15:0,51,594	0/0:6,0:6:18.05:0,18,210	0/0:9,0:9:13.12:0,13,200	0/0:13,0:13:20.75:0,21,242	0/0:9,0:9:27.08:0,27,315	1/1:2,8:9:15.05:246,15,0	1/1:1,12:14:24.08:394,24,0	0/0:22,0:22:63.19:0,63,734	0/0:3,0:3:9.03:0,9,105	1/1:2,5:7:15.05:246,15,0	1/1:0,7:7:18.06:295,18,0	0/0:7,0:7:21.06:0,21,245	1/1:0,3:3:9.03:148,9,0	0/0:9,0:9:27.08:0,27,315	0/0:4,0:4:12.04:0,12,140	0/1:2,5:7:19.91:182,0,20	0/0:23,0:23:66.18:0,66,758	1/1:3,26:29:69.24:1130,69,0	0/0:12,0:12:36.11:0,36,419	0/0:3,0:3:9.03:0,9,105	0/0:1,0:1:3.01:0,3,35	1/1:0,3:3:3.01:47,3,0	1/1:0,9:9:27.09:443,27,0	1/1:0,4:4:12.04:197,12,0	1/1:1,15:16:42.14:688,42,0	0/1:9,0:9:3.30:3,0,221	0/0:13,0:13:33.09:0,33,385	0/0:8,0:8:21.01:0,21,229
chr10	91711758	.	CG	C	6571.67	PASS	AB=0.994;AC=37;AF=0.661;AN=56;BaseQRankSum=-1.772;DP=381;FS=8.837;HRun=1;HaplotypeScore=66.3236;InbreedingCoeff=0.3863;MQ=76.49;MQ0=0;MQRankSum=-4.360;QD=21.69;ReadPosRankSum=-1.773;VQSLOD=3.6883;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:54.18:752,54,0	1/1:1,4:5:5.98:62,6,0	0/1:9,0:9:12.79:13,0,202	0/0:11,0:11:20.24:0,20,253	1/1:3,1:4:5.99:51,6,0	0/0:14,0:14:32.43:0,32,156	0/1:35,0:35:42.47:42,0,201	1/1:2,8:10:14.98:153,15,0	1/1:2,9:11:32.99:396,33,0	0/1:11,0:11:34.14:66,0,34	0/0:5,0:5:8.54:0,9,31	1/1:0,24:24:57.17:769,57,0	0/0:10,0:10:3.68:0,4,75	1/1:1,15:16:36.12:502,36,0	1/1:0,16:16:30.10:415,30,0	0/1:9,0:9:28.31:28,0,35	1/1:0,21:21:57.19:796,57,0	0/1:23,1:24:98.10:98,0,117	1/1:0,5:5:15.04:193,15,0	1/1:0,5:5:12:146,12,0	1/1:5,20:25:65.75:835,66,0	0/0:6,0:6:13.56:0,14,57	0/1:3,0:3:4.63:5,0,14	0/0:32,0:32:29.79:0,30,234	0/1:5,0:5:12.72:13,0,19	1/1:0,11:11:30.09:400,30,0	1/1:0,20:20:54.18:753,54,0	1/1:0,5:5:6.02:84,6,0
chr10	91713869	.	T	TCACCGGTCACAGG	13714.41	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=10.678;DP=637;FS=9.499;HRun=0;HaplotypeScore=212.0850;InbreedingCoeff=0.9690;MQ=83.97;MQ0=0;MQRankSum=-13.654;QD=60.95;ReadPosRankSum=1.611;VQSLOD=3.6675;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,4273	0/0:9,0:9:27.09:0,27,930	0/0:30,0:30:81.05:0,81,2115	0/0:18,0:18:38.96:0,39,913	0/0:21,0:21:56.93:0,57,1952	1/1:3,9:26:33.11:1694,33,0	1/1:10,4:24:42.14:2217,42,0	0/0:30,0:31:75.24:0,75,2401	0/0:21,0:21:54.17:0,54,1877	1/1:6,5:21:45.24:1410,45,0	1/1:4,5:18:18.06:988,18,0	0/0:15,0:15:45.12:0,45,1438	1/1:3,5:14:12.04:553,12,0	0/0:22,0:22:63.15:0,63,2141	0/0:30,0:30:87.27:0,87,2955	1/1:6,3:21:42.14:1876,42,0	0/0:31,0:31:90.28:0,90,3031	1/1:7,3:24:45.15:2198,45,0	0/0:19,0:19:54.16:0,54,1621	0/0:16,0:16:42.13:0,42,1419	0/0:41,0:41:99:0,114,4155	1/1:0,9:14:6.02:329,6,0	1/1:4,9:18:9.03:494,9,0	1/1:7,8:25:21.07:1047,21,0	1/1:7,3:20:18.06:909,18,0	0/0:30,0:30:87.25:0,87,2691	0/0:22,0:22:63.18:0,63,2160	0/0:13,0:13:39.11:0,39,1460
chr10	91714589	.	G	GCACACACACACACA	24270.31	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.517;DP=781;FS=15.110;HRun=0;HaplotypeScore=304.0095;InbreedingCoeff=0.6602;MQ=52.37;MQ0=14;MQRankSum=-1.070;QD=34.57;ReadPosRankSum=4.735;VQSLOD=2.6903;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:52,0:60:12.03:709,12,0	1/1:16,0:19:15.05:914,15,0	0/0:49,0:25:21.07:0,21,438	0/0:30,0:17:14.68:0,15,263	1/1:21,3:25:5.70:402,6,0	1/1:19,4:23:18.06:1210,18,0	1/1:45,0:45:14.58:554,15,0	1/1:37,0:36:45.12:1612,45,0	1/1:27,4:31:18.53:1163,19,0	1/1:25,4:29:51.10:2035,51,0	1/1:17,0:17:5.56:345,6,0	1/1:20,4:24:21.07:1251,21,0	1/1:19,4:25:18.53:1062,19,0	1/1:15,0:18:18.20:820,18,0	1/1:35,1:41:21.06:1127,21,0	1/1:23,6:31:21.03:1293,21,0	1/1:12,0:15:12.04:596,12,0	1/1:21,3:24:24.08:1396,24,0	1/1:20,0:19:30.08:955,30,0	1/1:17,3:19:15.52:984,16,0	1/1:38,0:38:12.78:209,13,0	1/1:16,2:22:8.92:495,9,0	1/1:13,0:13:1.91:141,2,0	1/1:26,3:29:8.91:491,9,0	1/1:22,2:26:6.02:364,6,0	1/1:30,0:30:57.17:2727,57,0	1/1:25,0:24:15.05:666,15,0	1/1:1,3:5:12.04:749,12,0
chr10	91714608	.	C	CACACACACACACA	17103.04	PASS	AB=0.994;AC=26;AF=0.464;AN=56;BaseQRankSum=11.953;DP=780;FS=33.115;HRun=0;HaplotypeScore=311.7983;InbreedingCoeff=-0.7341;MQ=46.23;MQ0=14;MQRankSum=-10.021;QD=24.90;ReadPosRankSum=9.456;VQSLOD=2.0861;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:55,0:52:99:818,0,124	0/1:17,0:16:45:447,0,45	0/0:48,0:27:57.11:0,57,1074	0/0:30,0:14:35.85:0,36,640	0/1:29,0:29:99:121,0,347	0/1:24,0:24:99:805,0,228	0/1:41,1:48:99:959,0,347	0/1:31,0:30:99:565,0,591	0/1:30,0:30:71.59:1342,0,72	0/1:33,0:32:99:1306,0,467	0/0:15,0:15:6.91:0,7,78	1/1:24,0:23:24.03:883,24,0	0/1:26,0:26:99:665,0,329	0/1:21,0:21:61.24:396,0,61	0/1:38,0:37:99:1236,0,146	0/1:25,0:25:74.83:1390,0,75	0/1:18,0:17:99:539,0,158	0/1:23,0:22:99:1031,0,294	0/1:23,0:20:99:310,0,354	0/1:25,0:24:99:777,0,297	0/1:40,0:40:99:237,0,116	0/1:25,0:25:99:491,0,163	0/1:15,0:15:50.38:159,0,50	0/1:28,0:28:99:220,0,170	0/1:30,0:30:99:761,0,144	0/1:30,0:30:99:587,0,582	0/1:21,0:21:99:480,0,161	0/1:7,0:7:92.26:578,0,92
chr10	91716335	.	A	AGCCTCTCTCCAGATCTCCACCAA	16018.32	PASS	AB=0.679;AC=52;AF=0.963;AN=54;BaseQRankSum=0.532;DP=212;FS=28.643;HRun=0;HaplotypeScore=252.1133;InbreedingCoeff=0.0439;MQ=79.86;MQ0=0;MQRankSum=-3.377;QD=76.64;ReadPosRankSum=2.602;VQSLOD=2.5744;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:24.04:808,24,0	1/1:3,0:3:9.03:433,9,0	0/1:5,0:10:6.81:917,0,7	0/1:5,1:9:54.29:895,0,54	1/1:3,0:3:0.89:2,1,0	1/1:11,0:11:15.05:582,15,0	1/1:8,0:8:15.05:696,15,0	1/1:8,0:8:24.08:759,24,0	1/1:13,0:13:27.05:1056,27,0	1/1:5,0:5:15.05:742,15,0	./.	1/1:7,0:7:18.06:828,18,0	1/1:5,0:5:15.01:517,15,0	1/1:11,0:11:21.03:595,21,0	1/1:19,0:19:33.10:1370,33,0	1/1:8,0:8:12.04:608,12,0	1/1:6,0:6:9.03:411,9,0	1/1:7,0:6:9.03:460,9,0	1/1:6,0:6:18.06:729,18,0	1/1:3,0:3:9.03:267,9,0	1/1:7,0:7:5.98:72,6,0	1/1:5,0:5:3.01:49,3,0	1/1:2,0:2:3.01:50,3,0	1/1:11,0:10:12.04:605,12,0	1/1:7,0:7:15.05:548,15,0	1/1:8,0:8:15.04:582,15,0	1/1:13,0:13:21.07:1024,21,0	1/1:3,0:3:9.03:416,9,0
chr10	91727995	.	GACACACAC	G	817.08	PASS	AB=0.753;AC=21;AF=0.420;AN=50;BaseQRankSum=0.833;DP=496;FS=0.000;HRun=0;HaplotypeScore=162.3487;InbreedingCoeff=0.3306;MQ=61.82;MQ0=9;MQRankSum=-2.473;QD=3.75;ReadPosRankSum=-0.088;VQSLOD=2.4369;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:40:20.37:0,20,220	0/0:3,0:3:3.01:0,3,34	./.	./.	0/0:12,0:11:30.02:0,30,515	1/1:6,7:13:6.36:90,6,0	1/1:8,10:18:2.30:74,2,0	0/0:27,0:26:21.92:0,22,308	0/1:13,1:14:41.67:42,0,924	1/1:10,6:15:11.91:88,12,0	1/1:6,7:13:0.47:1,0,0	0/0:17,0:17:28.29:0,28,637	1/1:7,4:11:9.03:204,9,0	0/0:9,0:10:12.04:0,12,330	0/0:10,0:15:9.47:0,9,129	0/1:5,6:13:12.16:218,0,12	0/0:25,0:30:19.15:0,19,483	0/1:17,1:18:5.07:138,0,5	0/1:15,0:17:12.72:13,0,139	0/0:4,0:5:11.98:0,12,135	0/0:33,0:35:19.80:0,20,447	1/1:11,0:12:2.99:24,3,0	./.	0/1:17,17:35:0.13:0,0,0	1/1:7,1:11:3.48:56,3,0	0/1:7,0:16:22.34:22,0,152	0/1:3,0:10:1.09:1,0,266	0/0:7,0:8:11.87:0,12,221
chr10	91729055	.	T	TG	212.57	PASS	AB=0.948;AC=17;AF=0.304;AN=56;BaseQRankSum=14.069;DP=523;FS=0.000;HRun=0;HaplotypeScore=136.1494;InbreedingCoeff=0.5886;MQ=74.22;MQ0=0;MQRankSum=-13.172;QD=1.25;ReadPosRankSum=-1.594;VQSLOD=1.9055;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.23:0,72,989	0/0:14,0:14:42.14:0,42,587	0/0:21,0:20:47.92:0,48,784	0/0:18,0:17:39.79:0,40,579	0/0:23,0:23:66.19:0,66,888	1/1:16,2:18:3.48:61,3,0	1/1:18,0:18:9.98:23,10,0	0/0:27,0:27:78.25:0,78,1074	0/0:16,0:16:48.16:0,48,671	0/1:21,0:21:3.55:34,0,4	1/1:22,0:22:8.34:41,8,0	0/0:18,0:18:54.16:0,54,737	0/1:14,1:15:21.92:46,0,22	0/0:13,0:13:39.13:0,39,545	0/0:23,0:23:69.23:0,69,965	1/1:12,0:12:8.36:29,8,0	0/0:24,0:24:69.23:0,69,964	0/1:6,1:8:0.13:27,0,0	0/0:18,0:18:51.16:0,51,694	0/0:21,0:21:63.19:0,63,862	0/0:17,0:17:48.16:0,48,671	0/1:15,0:15:11.38:13,0,11	1/1:12,1:13:10.65:71,11,0	1/1:6,0:6:8.78:29,9,0	0/1:22,0:22:12.89:18,0,13	0/0:34,0:34:99:0,102,1427	0/0:27,0:27:81.27:0,81,1133	0/0:15,0:15:45.15:0,45,629
chr10	91729056	.	A	AC	3887.84	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.711;DP=494;FS=8.413;HRun=0;HaplotypeScore=107.7833;InbreedingCoeff=0.9847;MQ=76.28;MQ0=0;MQRankSum=-15.624;QD=28.17;ReadPosRankSum=1.015;VQSLOD=3.3113;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.23:0,69,965	0/0:14,0:14:42.14:0,42,587	0/0:21,0:20:42.27:0,42,766	0/0:19,0:18:47.05:0,47,633	0/0:24,0:24:66.21:0,66,905	1/1:3,15:18:50.29:490,50,0	1/1:0,15:15:45.11:469,45,0	0/0:28,0:28:81.25:0,81,1101	0/0:16,0:16:48.16:0,48,671	1/1:1,13:14:42.12:475,42,0	1/1:2,15:17:42.09:437,42,0	0/0:18,0:18:54.18:0,54,754	1/1:4,10:14:36.03:366,36,0	0/0:13,0:13:39.13:0,39,545	0/0:24,0:24:69.23:0,69,965	1/1:0,9:9:27.06:276,27,0	0/0:25,0:25:72.23:0,72,988	1/1:3,3:6:11.61:107,12,0	0/0:17,0:17:51.13:0,51,662	0/0:22,0:22:63.21:0,63,879	0/0:16,0:16:48.16:0,48,671	1/1:1,12:13:39.06:382,39,0	1/1:1,10:11:32.66:311,33,0	1/1:1,3:4:8.05:65,8,0	1/1:0,16:17:51.05:509,51,0	0/0:34,0:34:99:0,102,1426	0/0:27,0:27:81.27:0,81,1133	0/0:15,0:15:45.15:0,45,629
chr10	91729058	.	A	AATGTTC	14569.66	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.547;DP=529;FS=9.050;HRun=0;HaplotypeScore=137.8734;InbreedingCoeff=0.9719;MQ=73.93;MQ0=0;MQRankSum=-17.234;QD=84.71;ReadPosRankSum=-1.687;VQSLOD=5.5376;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.21:0,69,1712	0/0:14,0:14:42.14:0,42,1076	0/0:20,0:19:39.47:0,39,1295	0/0:19,0:18:48.75:0,49,1151	0/0:24,0:24:72.22:0,72,1704	1/1:9,15:24:72.23:2177,72,0	1/1:0,15:15:45.15:1400,45,0	0/0:30,0:30:84.27:0,84,2021	0/0:16,0:16:48.16:0,48,1230	1/1:6,13:19:54.66:1740,55,0	1/1:9,15:24:66.14:1870,66,0	0/0:18,0:18:54.19:0,54,1374	1/1:7,9:17:49.04:1314,49,0	0/0:13,0:13:39.13:0,39,999	0/0:24,0:24:72.23:0,72,1754	1/1:4,9:13:39.07:1127,39,0	0/0:24,0:24:72.23:0,72,1762	1/1:3,3:6:18.05:463,18,0	0/0:17,0:17:51.12:0,51,1100	0/0:22,0:22:66.20:0,66,1578	0/0:16,0:16:48.16:0,48,1230	1/1:1,12:13:39.12:1161,39,0	1/1:5,10:15:42.06:1201,42,0	1/1:2,3:5:9.03:281,9,0	1/1:5,16:21:63.13:1836,63,0	0/0:34,0:34:4.81:0,5,2440	0/0:27,0:27:81.28:0,81,2075	0/0:16,0:16:48.15:0,48,1094
chr10	91729480	.	TA	T	7292.12	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.696;DP=508;FS=1.817;HRun=10;HaplotypeScore=83.9192;InbreedingCoeff=0.9193;MQ=70.63;MQ0=6;MQRankSum=-2.621;QD=16.39;ReadPosRankSum=5.216;VQSLOD=5.4088;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:74.98:651,75,0	1/1:0,3:3:6:52,6,0	0/0:38,0:21:35.04:0,35,369	0/0:25,0:16:20.60:0,21,154	1/1:1,12:13:12.41:262,12,0	1/1:6,19:25:64.92:413,65,0	1/1:6,10:15:32.44:205,32,0	1/1:13,13:26:35.94:331,36,0	1/1:0,10:10:26.99:234,27,0	1/1:3,12:14:35.15:212,35,0	1/1:3,9:12:26.54:167,27,0	1/1:1,12:13:26.98:234,27,0	1/1:3,8:11:29.64:198,30,0	1/1:1,6:7:20.67:168,21,0	1/1:1,17:18:29.99:260,30,0	1/1:8,16:24:47.25:302,47,0	1/1:5,26:31:59.98:521,60,0	1/1:9,15:24:47.23:304,47,0	1/1:2,10:12:29.99:260,30,0	1/1:7,15:22:41.84:353,42,0	1/1:5,15:20:23.99:208,24,0	1/1:5,10:15:32.49:210,32,0	1/1:3,17:20:52.98:332,53,0	1/1:1,16:17:49.82:312,50,0	1/1:5,10:15:27.38:180,27,0	1/1:1,18:19:50.91:427,51,0	1/1:1,17:18:41.99:365,42,0	1/1:2,9:11:14.97:130,15,0
chr10	91729489	.	AAT	A	6177	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=8.101;DP=499;FS=4.464;HRun=0;HaplotypeScore=98.7401;InbreedingCoeff=0.9949;MQ=71.74;MQ0=6;MQRankSum=-3.327;QD=32.34;ReadPosRankSum=2.025;VQSLOD=7.2147;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:77.12:0,77,433	0/0:5,0:5:14.61:0,15,89	0/0:40,0:21:44.10:0,44,572	0/0:21,0:13:29.96:0,30,339	0/0:14,0:14:32.24:0,32,205	1/1:25,1:26:75.12:944,75,0	1/1:13,2:14:36.02:433,36,0	0/0:20,0:20:42.79:0,43,263	0/0:12,0:12:31.88:0,32,196	1/1:19,0:18:47.92:554,48,0	1/1:11,0:11:30.06:375,30,0	0/0:13,0:13:25.84:0,26,131	1/1:10,0:10:30.04:365,30,0	0/0:8,0:8:23.20:0,23,135	0/0:17,0:17:28.72:0,29,145	1/1:16,2:18:48.16:642,48,0	0/0:27,0:27:60.46:0,60,316	1/1:15,5:20:50.98:612,51,0	0/0:13,0:13:35.73:0,36,214	0/0:19,0:19:47.18:0,47,292	0/0:17,0:17:28.40:0,28,148	1/1:13,0:13:36.04:449,36,0	1/1:23,0:23:59.94:714,60,0	1/1:19,0:19:56.94:678,57,0	1/1:17,0:17:32.86:409,33,0	0/0:24,0:24:32.52:0,33,305	0/0:18,0:13:42.95:0,43,218	0/0:10,0:10:17.36:0,17,96
chr10	91729492	.	TTG	T	6407.73	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=7.876;DP=499;FS=8.196;HRun=0;HaplotypeScore=97.8481;InbreedingCoeff=0.9953;MQ=72.78;MQ0=6;MQRankSum=-3.158;QD=33.90;ReadPosRankSum=2.788;VQSLOD=6.5770;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:86.72:0,87,994	0/0:5,0:5:15.05:0,15,221	0/0:38,0:20:39.70:0,40,470	0/0:20,0:13:23.13:0,23,340	0/0:16,0:16:39.19:0,39,550	1/1:7,19:26:74.93:975,75,0	1/1:5,11:15:33.11:455,33,0	0/0:19,0:20:40.69:0,41,526	0/0:13,0:13:36.11:0,36,478	1/1:2,16:17:47.86:586,48,0	1/1:2,9:11:29.99:389,30,0	0/0:12,0:12:27.07:0,27,300	1/1:0,8:8:24.08:333,24,0	0/0:9,0:9:27.07:0,27,325	0/0:17,0:17:30.09:0,30,345	1/1:5,13:18:48.05:637,48,0	0/0:24,0:24:63.18:0,63,732	1/1:5,15:20:44.87:565,45,0	0/0:15,0:15:43.02:0,43,591	0/0:20,0:20:48.82:0,49,668	0/0:17,0:17:30.01:0,30,333	1/1:0,14:14:36.12:493,36,0	1/1:1,23:24:57.18:774,57,0	1/1:2,16:18:53.54:712,54,0	1/1:8,8:16:38.92:487,39,0	0/0:23,0:23:58.08:0,58,769	0/0:20,0:15:50.99:0,51,536	0/0:10,0:10:18.05:0,18,222
chr10	91729493	.	TG	T	3609.87	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=13.471;DP=503;FS=7.703;HRun=9;HaplotypeScore=101.1682;InbreedingCoeff=0.9935;MQ=75.07;MQ0=6;MQRankSum=-4.200;QD=19.41;ReadPosRankSum=3.941;VQSLOD=3.5611;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:83.51:0,84,681	0/0:5,0:5:15.02:0,15,148	0/0:41,0:23:16.37:0,16,271	0/0:21,0:14:23.89:0,24,220	0/0:16,0:16:40.83:0,41,344	1/1:21,4:25:65.81:531,66,0	1/1:13,3:15:32.91:263,33,0	0/0:24,0:25:46.96:0,47,416	0/0:13,0:13:35.98:0,36,323	1/1:18,0:17:41.69:314,42,0	1/1:10,1:11:26.91:212,27,0	0/0:12,0:12:26.90:0,27,214	1/1:8,0:8:23.96:199,24,0	0/0:9,0:9:26.99:0,27,238	0/0:17,0:17:29.94:0,30,251	1/1:17,0:17:44.91:370,45,0	0/0:24,0:24:62.82:0,63,517	1/1:19,0:19:38.90:316,39,0	0/0:15,0:15:42.07:0,42,418	0/0:19,0:19:53.70:0,54,463	0/0:15,0:15:29.51:0,30,241	1/1:14,0:14:35.91:289,36,0	1/1:24,0:24:56.84:453,57,0	1/1:18,0:18:50.90:416,51,0	1/1:11,5:16:32.76:247,33,0	0/0:23,0:23:54.88:0,55,522	0/0:21,0:16:48.79:0,49,348	0/0:10,0:10:17.94:0,18,147
chr10	91730899	.	CTCT	C	9359.09	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=13.475;DP=644;FS=1.430;HRun=0;HaplotypeScore=101.0133;InbreedingCoeff=0.9993;MQ=81.42;MQ0=0;MQRankSum=-4.561;QD=37.74;ReadPosRankSum=5.836;VQSLOD=5.5454;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,2442	0/0:8,0:8:24.08:0,24,553	0/0:18,0:18:48.15:0,48,1026	0/0:18,0:18:48.16:0,48,1016	0/0:23,0:23:69.24:0,69,1589	1/1:1,21:22:51.17:870,51,0	1/1:1,36:37:78.27:1330,78,0	0/0:34,0:34:96.33:0,96,2208	0/0:21,0:21:63.22:0,63,1407	1/1:2,19:21:57.19:971,57,0	1/1:2,16:18:32.74:562,33,0	0/0:24,0:24:66.21:0,66,1415	1/1:1,28:29:72.25:1226,72,0	0/0:24,0:24:69.24:0,69,1583	0/0:21,0:21:63.22:0,63,1453	1/1:1,19:20:51.17:870,51,0	0/0:30,0:30:90.31:0,90,2056	1/1:1,14:15:24.08:409,24,0	0/0:13,0:13:39.11:0,39,772	0/0:23,0:23:69.24:0,69,1590	0/0:46,0:46:99:0,138,3126	1/1:2,16:18:39.13:665,39,0	1/1:0,21:21:42.14:716,42,0	1/1:2,30:32:65.84:1125,66,0	1/1:1,14:15:36.12:614,36,0	0/0:24,0:24:72.23:0,72,1568	0/0:22,0:21:63.19:0,63,1344	0/0:10,0:10:30.10:0,30,673
chr10	91731421	.	C	CTT	5657.65	PASS	AB=0.978;AC=32;AF=0.593;AN=54;BaseQRankSum=0.821;DP=560;FS=0.364;HRun=3;HaplotypeScore=232.3153;InbreedingCoeff=-0.1756;MQ=38.11;MQ0=8;MQRankSum=-4.606;QD=11.14;ReadPosRankSum=2.292;VQSLOD=1.4267;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:30:7.62:8,0,278	0/0:7,0:7:12.68:0,13,88	0/0:9,0:3:5.91:0,6,39	./.	1/1:28,3:31:72.29:642,72,0	0/1:18,0:18:99:200,0,123	0/1:14,0:14:99:116,0,116	0/1:36,0:35:9.89:278,0,10	1/1:15,1:17:42.79:376,43,0	0/1:23,0:22:14.11:14,0,309	0/1:13,0:13:97.74:111,0,98	1/1:20,3:23:27.23:437,27,0	0/1:16,0:16:99:176,0,132	1/1:12,2:14:28.40:266,28,0	0/0:27,0:27:67.11:0,67,576	0/1:19,1:20:99:180,0,171	0/1:26,0:26:0.70:1,0,90	0/1:17,0:17:99:202,0,110	0/1:14,0:12:4.34:159,0,4	1/1:31,1:33:64.76:565,65,0	1/1:8,0:8:15.73:89,16,0	0/1:13,0:12:45.16:156,0,45	0/1:14,0:14:82.41:171,0,82	0/1:19,1:19:70.73:71,0,112	0/1:17,0:17:42.30:304,0,42	0/1:20,1:26:14.09:413,0,14	1/1:30,0:26:8.91:385,9,0	1/1:14,2:18:28.81:340,29,0
chr10	91731422	.	TCTCTCTCTCTCTCTC	T	7984.40	PASS	AB=0.832;AC=21;AF=0.389;AN=54;BaseQRankSum=1.116;DP=558;FS=17.304;HRun=0;HaplotypeScore=352.4436;InbreedingCoeff=-0.0612;MQ=37.93;MQ0=8;MQRankSum=-5.378;QD=23.48;ReadPosRankSum=2.017;VQSLOD=2.2704;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:30:59.92:0,60,2141	0/0:7,0:7:18.06:0,18,716	0/0:9,0:3:9.03:0,9,190	./.	0/1:33,0:31:65.77:66,0,695	0/1:5,11:17:20.56:1128,0,21	0/1:9,1:13:81.43:195,0,81	0/1:35,0:34:1.57:2,0,1326	0/0:18,0:18:20.59:0,21,1068	0/1:20,3:22:99:665,0,154	1/1:12,1:17:4.72:492,5,0	0/1:25,0:23:27.12:27,0,1156	0/1:10,5:17:25.86:745,0,26	0/0:15,0:14:4.74:0,5,518	0/0:26,0:26:78.26:0,78,3028	0/1:13,5:20:99:816,0,209	0/0:26,0:26:23.64:0,24,707	0/1:10,4:17:79.88:736,0,80	0/0:14,0:11:25.45:0,25,428	0/1:36,0:33:62.58:63,0,1301	1/1:5,0:8:6.07:196,6,0	0/1:7,3:12:26.35:508,0,26	1/1:6,4:14:6.12:668,6,0	0/1:13,4:19:8.41:399,0,8	1/1:3,10:17:50.82:1261,51,0	0/0:26,0:26:19.23:0,19,1135	0/0:32,0:26:43.34:0,43,1515	0/1:15,0:15:19.35:19,0,1281
chr10	91731431	.	C	CTT	4032.43	PASS	AB=0.969;AC=31;AF=0.554;AN=56;BaseQRankSum=7.656;DP=539;FS=10.013;HRun=1;HaplotypeScore=232.7183;InbreedingCoeff=-0.1345;MQ=36.16;MQ0=7;MQRankSum=-4.020;QD=8.88;ReadPosRankSum=5.044;VQSLOD=-0.2889;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:27:5.48:0,5,191	0/0:6,0:6:9.84:0,10,67	0/0:10,0:2:2.98:0,3,22	0/0:15,0:1:0:0,0,0	0/1:30,4:32:13.86:361,0,14	0/1:17,0:17:2.76:177,0,3	0/1:15,0:15:45.79:46,0,57	0/1:31,0:31:99:112,0,114	0/1:16,2:17:25.28:211,0,25	0/1:17,0:16:7.95:187,0,8	0/1:16,0:16:1.66:87,0,2	1/1:20,4:22:1.82:353,2,0	1/1:15,0:15:27.85:168,28,0	1/1:14,1:14:20.85:258,21,0	0/0:22,0:22:52.72:0,53,470	0/1:15,0:15:1.75:122,0,2	0/1:23,0:23:6.71:7,0,34	0/1:16,0:16:3.96:91,0,4	0/1:9,1:8:31.72:32,0,34	0/1:36,4:37:5.68:552,0,6	1/1:7,0:7:1.44:32,1,0	0/1:14,0:13:19.60:48,0,20	1/1:15,0:15:6.40:105,6,0	1/1:21,0:20:13.47:199,13,0	1/1:19,0:19:1.98:132,2,0	0/1:21,2:23:75.44:162,0,75	1/1:28,5:27:37.20:471,37,0	0/1:16,0:16:23.19:119,0,23
chr10	91731435	.	C	CTTTCTA	6724.52	PASS	AB=0.994;AC=27;AF=0.482;AN=56;BaseQRankSum=-2.780;DP=536;FS=1.218;HRun=0;HaplotypeScore=258.8446;InbreedingCoeff=-0.4357;MQ=36.81;MQ0=7;MQRankSum=-7.916;QD=15.18;ReadPosRankSum=0.033;VQSLOD=4.0741;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:22:9.96:0,10,275	0/1:6,0:6:35.20:35,0,132	0/0:12,0:4:11.99:0,12,121	0/0:15,0:1:0:0,0,0	0/1:34,0:33:39.55:757,0,40	0/1:15,0:15:75.40:75,0,122	0/1:16,0:16:19.20:19,0,185	0/1:29,0:29:30.21:434,0,30	0/1:16,1:16:51.73:530,0,52	0/1:18,0:17:99:114,0,100	0/1:15,0:15:26.87:27,0,152	0/1:24,0:22:59.43:783,0,59	0/1:16,0:16:61.75:62,0,100	1/1:12,2:13:4.75:427,5,0	0/0:23,0:23:64.52:0,65,820	0/1:15,0:15:47.56:48,0,157	0/1:23,0:23:32.51:33,0,88	0/0:16,0:16:11.93:0,12,210	0/1:12,0:10:48.66:118,0,49	1/1:36,4:37:38.50:1195,39,0	1/1:5,0:5:3.01:51,3,0	0/1:16,0:15:12.81:13,0,146	0/1:16,0:16:30.28:30,0,110	0/1:19,0:18:51.25:51,0,96	0/1:22,0:22:23.19:23,0,146	0/1:21,0:21:99:543,0,114	0/1:32,1:27:13.39:1029,0,13	1/1:15,1:16:10.99:328,11,0
chr10	91731439	.	C	CTT	5589.96	PASS	AB=0.907;AC=29;AF=0.518;AN=56;BaseQRankSum=0.703;DP=536;FS=1.700;HRun=1;HaplotypeScore=220.6521;InbreedingCoeff=-0.3371;MQ=37.29;MQ0=7;MQRankSum=-3.474;QD=11.84;ReadPosRankSum=3.803;VQSLOD=1.8759;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,4:21:44.60:289,0,45	0/1:6,0:6:28.13:47,0,28	0/0:15,0:4:11.98:0,12,105	0/0:16,0:2:0:0,0,0	0/1:34,1:34:1.49:508,0,1	0/1:14,0:14:20.70:125,0,21	0/0:17,0:17:38.87:0,39,239	1/1:19,7:26:49.81:673,50,0	1/1:14,0:15:1.37:278,1,0	0/1:12,0:15:99:105,0,108	0/1:14,0:15:1.10:1,0,100	0/1:18,1:21:28.32:361,0,28	0/1:13,0:15:67.96:68,0,71	0/1:11,2:13:2.62:235,0,3	0/1:23,0:23:48.72:327,0,49	0/1:13,0:15:68.23:68,0,86	0/1:22,0:22:10.73:70,0,11	0/1:16,0:18:3.38:3,0,157	0/1:12,1:11:11.79:163,0,12	1/1:32,3:35:72.68:746,73,0	1/1:5,0:5:3.01:40,3,0	0/0:16,0:15:6.52:0,7,142	0/1:15,0:17:68.79:78,0,69	0/1:16,0:19:55.14:65,0,55	0/1:21,0:22:99:102,0,100	0/1:19,2:21:75.40:265,0,75	0/1:29,2:29:20.24:585,0,20	1/1:10,6:16:30.77:390,31,0
chr10	91731443	.	C	CTTTCTT	10763.12	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=-6.908;DP=540;FS=4.285;HRun=0;HaplotypeScore=231.8786;InbreedingCoeff=0.7426;MQ=41.90;MQ0=6;MQRankSum=-4.278;QD=30.66;ReadPosRankSum=0.165;VQSLOD=4.3508;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,3:21:48.98:1028,49,0	1/1:4,2:6:14.98:312,15,0	0/0:17,0:5:15.03:0,15,236	0/1:16,0:4:1.02:1,0,25	1/1:35,0:33:50.36:1165,50,0	0/0:15,0:15:39.39:0,39,382	0/0:16,0:16:45.15:0,45,640	1/1:22,0:22:58.74:798,59,0	1/1:18,0:17:26.74:716,27,0	0/0:19,0:18:50.41:0,50,574	0/0:15,0:15:38.28:0,38,472	1/1:23,0:21:19.20:861,19,0	0/0:14,0:14:33.89:0,34,420	0/1:15,0:14:1.32:464,0,1	1/1:19,0:23:52.42:1065,52,0	0/0:18,0:18:44.43:0,44,513	1/1:3,17:23:11.98:205,12,0	0/0:18,0:18:36.27:0,36,588	1/1:12,0:10:23.33:299,23,0	1/1:37,0:34:77.10:1437,77,0	1/1:4,0:4:2.97:20,3,0	0/0:19,0:19:49.66:0,50,605	0/0:17,0:17:42.50:0,43,466	0/1:21,0:20:16.66:17,0,222	0/0:21,0:21:58.94:0,59,644	1/1:20,0:20:12.79:583,13,0	0/1:35,0:29:13.43:1303,0,13	1/1:15,0:15:32.44:489,32,0
chr10	91731528	.	TTC	T	12682.15	PASS	AB=0.969;AC=53;AF=0.946;AN=56;BaseQRankSum=-2.174;DP=640;FS=33.188;HRun=0;HaplotypeScore=101.0882;InbreedingCoeff=0.6309;MQ=71.06;MQ0=10;MQRankSum=-2.365;QD=20.89;ReadPosRankSum=3.152;VQSLOD=3.2900;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,18:26:50.78:552,51,0	1/1:2,9:11:27.08:324,27,0	0/0:33,0:18:17.82:0,18,216	0/1:30,1:23:26.57:27,0,142	1/1:4,17:21:47.94:496,48,0	1/1:3,18:21:42.13:504,42,0	1/1:7,15:23:38.95:446,39,0	1/1:11,7:18:19.40:207,19,0	1/1:5,12:17:35.94:410,36,0	1/1:13,17:31:57.01:660,57,0	1/1:4,24:29:68.73:704,69,0	1/1:1,18:19:42.13:504,42,0	1/1:3,16:19:36:432,36,0	1/1:3,16:19:39.12:468,39,0	1/1:12,11:23:47.97:544,48,0	1/1:7,21:30:17.97:664,18,0	1/1:7,11:18:45.13:528,45,0	1/1:5,20:24:42.13:504,42,0	1/1:8,10:16:20.92:221,21,0	1/1:7,27:34:75.03:817,75,0	1/1:1,13:14:24.03:272,24,0	1/1:11,16:26:33.06:379,33,0	1/1:6,19:24:38.82:446,39,0	1/1:7,14:21:33.10:396,33,0	1/1:5,17:23:47.98:554,48,0	1/1:4,17:21:51.11:594,51,0	1/1:5,21:27:57.01:662,57,0	1/1:2,11:14:32.93:374,33,0
chr10	91732496	.	T	TGGAGTCAAA	57839.74	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-9.696;DP=721;FS=9.972;HRun=0;HaplotypeScore=137.1779;InbreedingCoeff=0.9572;MQ=84.31;MQ0=1;MQRankSum=-12.562;QD=88.71;ReadPosRankSum=6.208;VQSLOD=4.6794;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,23:36:75.21:3264,75,0	1/1:0,12:14:30.10:1285,30,0	0/0:37,0:37:99:0,102,2458	0/0:32,0:31:78.47:0,78,1965	1/1:2,19:26:57.13:2126,57,0	1/1:1,15:20:42.14:1995,42,0	1/1:8,14:30:48.16:1991,48,0	1/1:9,16:36:93.28:3359,93,0	1/1:2,26:38:81.28:3729,81,0	1/1:14,12:26:72.24:3056,72,0	1/1:2,7:10:24.08:1066,24,0	1/1:5,20:32:66.23:3000,66,0	1/1:4,24:30:69.24:3226,69,0	1/1:3,19:28:51.18:2307,51,0	1/1:3,17:29:42.14:1996,42,0	1/1:2,18:26:42.14:1971,42,0	1/1:11,10:26:54.19:2264,54,0	1/1:3,7:15:21.07:1012,21,0	1/1:1,8:15:45.15:1928,45,0	1/1:9,17:33:72.10:2502,72,0	1/1:3,8:17:27.09:1272,27,0	1/1:1,20:27:60.21:2797,60,0	1/1:1,9:16:20.63:1008,21,0	1/1:5,5:15:15.05:488,15,0	1/1:5,17:28:48:2283,48,0	1/1:4,23:29:75.25:3373,75,0	1/1:7,25:43:90.31:4112,90,0	1/1:0,2:4:9.03:428,9,0
chr10	91733164	.	TACACACAC	T	8390.60	PASS	AB=0.729;AC=26;AF=0.520;AN=50;BaseQRankSum=3.596;DP=683;FS=4.702;HRun=0;HaplotypeScore=194.0359;InbreedingCoeff=0.6149;MQ=58.37;MQ0=8;MQRankSum=-3.932;QD=22.37;ReadPosRankSum=4.410;VQSLOD=4.2510;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,25:41:9.09:409,9,0	1/1:3,5:8:12.51:309,13,0	./.	0/0:32,0:14:8.31:0,8,216	1/1:8,19:27:32.90:784,33,0	0/0:18,0:17:9.02:0,9,250	0/0:36,0:33:26.91:0,27,506	0/1:23,0:23:44.86:109,0,45	1/1:9,21:31:42.14:1059,42,0	0/0:17,0:16:42.09:0,42,1364	./.	1/1:5,16:23:33.08:820,33,0	0/0:18,0:19:35.96:0,36,901	1/1:7,17:25:24.94:774,25,0	1/1:12,23:35:48.05:1143,48,0	0/0:26,0:26:12.01:0,12,235	1/1:11,14:25:12.04:309,12,0	0/0:31,0:32:72.52:0,73,2065	0/1:10,8:19:14.49:474,0,14	0/1:6,10:16:0.95:458,0,1	0/1:18,28:46:38.15:68,0,38	0/0:20,0:20:3.01:0,3,91	./.	0/0:40,0:40:18.18:0,18,339	0/0:17,0:18:11.97:0,12,373	1/1:7,18:26:41.75:1004,42,0	1/1:9,13:23:24.02:594,24,0	1/1:3,3:6:3.01:77,3,0
chr10	91733195	.	G	GCA	1723.51	PASS	AB=0.624;AC=16;AF=0.308;AN=52;BaseQRankSum=-4.608;DP=764;FS=2.052;HRun=0;HaplotypeScore=182.4704;InbreedingCoeff=0.8440;MQ=63.97;MQ0=9;MQRankSum=-3.502;QD=6.63;ReadPosRankSum=3.074;VQSLOD=3.5729;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:45.02:0,45,486	0/0:6,0:6:15:0,15,149	0/0:39,0:23:59.53:0,60,727	0/0:36,0:21:53.84:0,54,632	0/0:21,0:21:36.07:0,36,381	1/1:12,4:15:9.01:107,9,0	1/1:19,32:48:8.77:124,9,0	0/0:24,0:24:60.13:0,60,715	0/0:23,0:23:50.95:0,51,533	1/1:11,12:22:39.13:588,39,0	./.	0/0:26,0:26:44.63:0,45,469	1/1:8,12:20:24.55:362,25,0	0/0:33,0:32:62.94:0,63,663	0/0:38,0:37:75.11:0,75,812	1/1:15,13:28:3.01:38,3,0	0/0:21,0:21:32.60:0,33,381	1/1:12,24:36:41.70:628,42,0	0/0:26,0:25:66.13:0,66,761	0/0:21,0:21:42.12:0,42,499	0/0:61,0:61:63.16:0,63,754	./.	0/1:4,12:16:0:1,0,0	0/1:25,21:47:0.41:1,0,0	1/1:8,14:22:3.01:46,3,0	0/0:24,0:24:60.15:0,60,688	0/0:20,0:20:35.81:0,36,354	0/0:8,0:8:15:0,15,145
chr10	91736151	.	CAG	C	104.12	PASS	AB=0.898;AC=12;AF=0.250;AN=48;BaseQRankSum=2.082;DP=169;FS=27.621;HRun=0;HaplotypeScore=34.3892;InbreedingCoeff=0.3107;MQ=81.31;MQ0=0;MQRankSum=-1.065;QD=1.93;ReadPosRankSum=-2.066;VQSLOD=-0.4025;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,1:7:2.99:0,3,24	1/1:1,2:3:5.95:59,6,0	0/0:11,0:7:15.01:0,15,180	0/1:21,2:18:22.61:23,0,316	0/0:3,0:3:2.22:0,2,7	0/0:7,0:7:2.97:0,3,20	0/0:8,0:8:6:0,6,63	0/0:11,0:11:32.74:0,33,364	1/1:7,2:9:5.99:50,6,0	0/0:1,0:1:2.97:0,3,20	0/0:1,0:1:2.22:0,2,7	0/0:4,0:4:5.23:0,5,47	0/0:5,0:5:2.97:0,3,20	./.	0/0:3,0:3:2.97:0,3,20	./.	0/1:12,2:14:13.98:33,0,14	0/0:7,0:7:11.95:0,12,141	0/0:8,0:8:20.72:0,21,203	1/1:1,1:2:3.01:36,3,0	0/0:14,0:14:11.81:0,12,127	1/1:2,0:2:2.29:6,2,0	0/0:2,0:2:2.49:0,2,9	0/0:14,0:14:5.48:0,5,32	1/1:0,1:1:3:26,3,0	0/0:3,0:3:6:0,6,63	./.	./.
chr10	91736154	.	C	CT	956.53	PASS	AB=0.936;AC=29;AF=0.558;AN=52;BaseQRankSum=-3.552;DP=120;FS=11.376;HRun=0;HaplotypeScore=41.5458;InbreedingCoeff=0.1655;MQ=94.81;MQ0=0;MQRankSum=1.144;QD=10.07;ReadPosRankSum=2.456;VQSLOD=2.5601;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:4:0.62:18,0,1	0/0:4,0:4:3.48:0,3,12	0/1:17,0:12:41.93:42,0,73	0/1:20,0:15:26.39:194,0,26	1/1:1,1:1:3.01:46,3,0	0/1:3,1:4:0:0,0,0	0/1:8,0:8:3.10:3,0,19	1/1:2,6:8:18.02:253,18,0	0/0:7,0:7:1.83:0,2,4	0/0:1,0:1:2.60:0,3,10	1/1:1,1:2:1.59:44,2,0	0/1:2,1:3:0.20:42,0,0	1/1:2,0:2:2.02:7,2,0	1/1:1,0:1:2.68:11,3,0	0/0:1,0:1:2.84:0,3,14	./.	0/0:4,0:4:1.25:0,1,3	1/1:0,1:1:3.01:48,3,0	1/1:0,2:2:6.02:95,6,0	0/0:2,0:2:1.82:0,2,5	1/1:0,5:5:3.01:47,3,0	1/1:4,0:4:4.67:71,5,0	1/1:1,1:1:3.01:46,3,0	1/1:3,3:6:8.48:104,8,0	0/0:2,0:2:1.36:0,1,3	0/1:4,0:4:15.63:16,0,38	0/0:2,0:2:5.99:0,6,50	./.
chr10	91736163	.	T	TC	1665.67	PASS	AB=0.756;AC=47;AF=0.904;AN=52;BaseQRankSum=-2.576;DP=124;FS=12.466;HRun=5;HaplotypeScore=34.0276;InbreedingCoeff=0.0547;MQ=104.33;MQ0=0;MQRankSum=-2.685;QD=15.86;ReadPosRankSum=0.333;VQSLOD=1.6606;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:11.90:112,12,0	1/1:1,2:3:2.56:39,3,0	0/0:19,0:15:32.62:0,33,300	0/1:20,0:17:38.58:39,0,196	1/1:3,0:2:3.01:39,3,0	1/1:0,1:1:3.01:39,3,0	1/1:0,5:6:11.87:113,12,0	1/1:3,0:3:8.94:77,9,0	1/1:0,3:3:9.03:118,9,0	1/1:0,4:4:12.02:130,12,0	0/1:2,1:3:30.45:30,0,53	0/1:1,2:3:10.75:29,0,11	1/1:0,5:5:6.02:79,6,0	1/1:0,1:1:2.94:18,3,0	1/1:2,0:2:2.64:34,3,0	1/1:3,0:3:5.85:78,6,0	1/1:2,3:5:12.02:128,12,0	./.	1/1:0,2:2:6.01:65,6,0	1/1:1,2:3:6.02:78,6,0	1/1:2,0:2:6:58,6,0	1/1:2,2:4:5.87:35,6,0	1/1:0,3:2:6.02:79,6,0	1/1:0,5:5:6.02:79,6,0	1/1:0,4:4:5.95:57,6,0	1/1:1,3:4:8.98:118,9,0	1/1:0,4:4:9.03:118,9,0	./.
chr10	91739540	.	CAT	C	8417.24	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=17.525;DP=934;FS=5.827;HRun=0;HaplotypeScore=134.6618;InbreedingCoeff=0.9888;MQ=60.78;MQ0=3;MQRankSum=1.802;QD=29.33;ReadPosRankSum=3.441;VQSLOD=6.7238;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:37:56.81:0,57,864	0/0:12,0:12:36.12:0,36,623	0/0:20,0:17:30.70:0,31,418	0/0:13,0:7:8.42:0,8,122	0/0:27,0:27:63.20:0,63,1047	0/0:23,0:23:60.21:0,60,1034	0/0:24,0:24:63.17:0,63,1005	0/0:48,0:46:29.50:0,30,1366	0/0:46,0:46:99:0,108,1815	1/1:10,70:80:99:2668,208,0	1/1:5,29:33:72.06:958,72,0	0/0:44,0:44:99:0,129,2159	1/1:4,30:34:75.25:997,75,0	0/0:34,0:34:87.30:0,87,1494	0/0:41,0:41:99:0,108,1764	0/0:33,0:33:90.06:0,90,1396	0/0:32,0:33:69.70:0,70,1143	1/1:6,12:17:42.09:536,42,0	0/0:14,0:13:36.12:0,36,599	0/0:27,0:27:78.24:0,78,1281	0/0:46,0:46:99:0,132,2245	1/1:4,29:33:60.03:798,60,0	1/1:1,19:20:51.17:678,51,0	1/1:6,25:31:54.18:719,54,0	1/1:5,32:37:83.57:1063,84,0	0/0:53,1:54:99:0,107,2224	0/0:44,0:43:99:0,123,1937	0/0:25,0:25:75.22:0,75,1229
chr10	91740145	.	T	TA	4490.15	PASS	AB=0.788;AC=22;AF=0.393;AN=56;BaseQRankSum=-11.785;DP=525;FS=1.677;HRun=10;HaplotypeScore=60.5108;InbreedingCoeff=0.8216;MQ=66.62;MQ0=2;MQRankSum=1.755;QD=22.12;ReadPosRankSum=1.720;VQSLOD=5.8618;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,123,1005	0/1:9,1:10:5.01:5,0,170	0/0:15,0:11:29.84:0,30,236	0/0:7,0:8:19.96:0,20,145	0/0:35,0:36:99:0,101,810	1/1:0,14:14:39.10:416,39,0	1/1:4,13:17:38.97:399,39,0	0/0:28,0:28:62.90:0,63,517	0/0:17,0:17:44.94:0,45,369	1/1:2,21:22:63.16:671,63,0	1/1:1,13:14:38.93:386,39,0	0/0:18,0:18:41.89:0,42,339	1/1:1,10:11:30.08:320,30,0	0/0:17,0:17:40.75:0,41,323	0/0:15,0:15:35.92:0,36,295	0/1:7,7:14:25.23:168,0,25	0/0:25,0:25:62.85:0,63,511	1/1:2,12:14:33.08:352,33,0	0/0:19,0:18:53.91:0,54,438	0/0:15,0:15:41.95:0,42,345	0/0:9,0:9:20.94:0,21,167	1/1:4,7:11:0.23:168,0,0	1/1:7,17:24:42.11:448,42,0	1/1:2,25:27:57.14:607,57,0	1/1:3,20:22:32.50:551,32,0	0/0:16,1:17:9.95:0,10,288	0/0:18,0:17:47.94:0,48,394	0/0:18,0:18:47.92:0,48,393
chr10	91740401	.	C	CCTT	8677.56	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-14.361;DP=763;FS=2.561;HRun=0;HaplotypeScore=101.1640;InbreedingCoeff=0.9976;MQ=76.89;MQ0=0;MQRankSum=-3.644;QD=59.85;ReadPosRankSum=3.476;VQSLOD=6.5959;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,74:77:99:4601,205,0	1/1:0,10:10:30.10:690,30,0	0/0:26,0:26:72.15:0,72,1077	0/0:26,0:26:65.81:0,66,951	0/0:24,0:24:69.07:0,69,1084	0/0:27,0:27:69.20:0,69,1123	0/0:28,0:28:81.28:0,81,1375	0/0:36,0:36:99:0,105,1646	0/0:39,0:39:99:0,111,1885	0/0:31,0:31:90.29:0,90,1485	0/0:17,0:17:51.17:0,51,866	0/0:32,0:32:90.27:0,90,1445	0/0:31,0:31:81.25:0,81,1328	0/0:25,0:25:72.25:0,72,1218	1/1:1,27:28:72.25:1658,72,0	0/0:17,0:17:51.17:0,51,869	1/1:2,27:30:75.26:1728,75,0	0/0:18,0:18:54.18:0,54,920	0/0:29,0:29:81.26:0,81,1352	0/0:25,0:25:69.11:0,69,1099	0/0:36,0:36:99:0,108,1840	0/0:21,0:21:63.19:0,63,1016	0/0:20,0:20:60.21:0,60,1023	0/0:25,0:25:69.24:0,69,1176	0/0:21,0:21:63.22:0,63,1073	0/0:30,0:30:81.26:0,81,1325	0/0:28,0:28:78.22:0,78,1238	0/0:6,0:6:18.06:0,18,307
chr10	91744358	.	T	TA	5298.15	PASS	AB=0.926;AC=23;AF=0.411;AN=56;BaseQRankSum=-13.676;DP=500;FS=0.771;HRun=6;HaplotypeScore=46.1653;InbreedingCoeff=0.9096;MQ=69.85;MQ0=0;MQRankSum=2.932;QD=27.31;ReadPosRankSum=3.997;VQSLOD=4.9233;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.17:0,93,938	0/0:8,0:8:24.02:0,24,230	0/0:8,0:8:21.04:0,21,209	0/0:8,0:8:21.03:0,21,208	0/0:20,0:20:54.08:0,54,541	1/1:3,18:21:39.12:491,39,0	1/1:0,15:15:42.13:528,42,0	0/0:38,0:38:99:0,102,1035	0/0:16,1:16:4.34:0,4,351	1/1:2,17:19:51.16:631,51,0	1/1:3,8:11:21.07:264,21,0	0/0:20,0:20:42.09:0,42,428	1/1:0,17:17:51.16:641,51,0	0/0:12,0:12:27.01:0,27,275	0/0:17,0:17:42.07:0,42,421	1/1:3,15:17:39.12:490,39,0	0/0:32,0:32:93.17:0,93,938	1/1:2,19:21:54.17:679,54,0	0/0:24,0:24:63.14:0,63,643	0/0:15,0:15:30.07:0,30,306	0/0:17,0:17:45.10:0,45,459	1/1:0,3:3:9.03:113,9,0	1/1:0,10:10:27.09:340,27,0	1/1:2,17:19:45.10:548,45,0	1/1:0,15:15:45.14:566,45,0	0/1:23,2:25:6.34:6,0,569	0/0:19,0:19:42.08:0,42,421	0/0:18,0:18:51.12:0,51,520
chr10	91746489	.	CTTT	C	2482.05	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=-0.917;DP=434;FS=3.095;HRun=4;HaplotypeScore=108.0778;InbreedingCoeff=0.7594;MQ=53.28;MQ0=14;MQRankSum=5.422;QD=12.54;ReadPosRankSum=1.932;VQSLOD=0.0186;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:22:9.75:0,10,351	0/1:15,0:14:30.48:30,0,172	0/0:7,0:2:5.91:0,6,38	0/0:6,0:3:0.38:0,0,17	0/0:17,0:17:47.99:0,48,462	1/1:19,0:19:37.56:257,38,0	1/1:14,0:13:20.55:190,21,0	0/0:26,0:23:62.89:0,63,578	0/0:14,0:13:35.81:0,36,329	1/1:32,0:30:56.15:575,56,0	1/1:12,0:12:31.51:217,32,0	0/0:14,0:13:29.91:0,30,260	1/1:15,0:15:31.97:192,32,0	0/0:11,0:10:29.98:0,30,308	0/1:13,0:12:22.92:23,0,131	1/1:20,0:20:34.69:259,35,0	0/0:29,0:21:20.95:0,21,362	1/1:9,4:12:29.94:332,30,0	0/0:17,0:15:41.85:0,42,396	0/0:9,0:8:20.90:0,21,167	0/0:5,0:5:11.94:0,12,94	1/1:10,0:9:24.33:154,24,0	1/1:10,0:9:3.84:101,4,0	1/1:11,0:10:7.73:69,8,0	1/1:13,1:14:40.06:295,40,0	0/0:17,0:17:17.88:0,18,359	0/0:25,0:25:68.92:0,69,683	0/0:14,0:14:38.97:0,39,363
chr10	91746547	.	C	CTT	578.32	PASS	AB=0.940;AC=6;AF=0.120;AN=50;BaseQRankSum=-0.700;DP=437;FS=3.733;HRun=1;HaplotypeScore=70.9523;InbreedingCoeff=0.1919;MQ=25.67;MQ0=128;MQRankSum=-0.357;QD=5.90;ReadPosRankSum=0.136;VQSLOD=-0.2918;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:13:17.93:0,18,258	0/0:9,0:7:21.03:0,21,290	./.	./.	0/0:7,0:6:11.91:0,12,136	0/1:11,5:10:52.91:316,0,53	0/1:39,0:18:0.93:1,0,310	./.	0/0:11,0:5:11.96:0,12,115	0/0:29,0:14:38.13:0,38,440	0/0:6,0:5:0.65:0,1,66	0/0:13,0:6:6.02:0,6,97	0/0:16,0:7:14.74:0,15,152	0/0:14,0:7:11.48:0,11,103	0/0:13,0:9:17.95:0,18,226	1/1:5,6:7:18.06:360,18,0	0/0:38,0:23:40.80:0,41,622	0/1:18,0:9:7.13:7,0,165	0/0:21,0:5:14.80:0,15,151	0/0:8,0:4:8:0,8,66	0/0:19,0:9:14.93:0,15,180	0/0:14,0:10:12.04:0,12,150	0/0:6,0:5:8.96:0,9,88	0/0:21,0:11:14.95:0,15,157	0/1:14,0:11:3.14:3,0,204	0/0:20,0:4:7.56:0,8,76	0/0:17,0:11:28.52:0,29,300	0/0:9,0:7:11.07:0,11,153
chr10	91746553	.	C	CTT	1382.31	PASS	AB=0.848;AC=14;AF=0.280;AN=50;BaseQRankSum=0.394;DP=427;FS=0.754;HRun=1;HaplotypeScore=60.6399;InbreedingCoeff=0.0979;MQ=24.93;MQ0=124;MQRankSum=4.020;QD=7.51;ReadPosRankSum=-0.823;VQSLOD=-0.1060;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:13:18.05:0,18,252	0/0:9,0:7:18.06:0,18,293	./.	./.	0/0:6,0:5:9.01:0,9,121	0/1:13,1:8:20.37:20,0,41	0/1:40,0:16:32.66:33,0,372	./.	0/0:10,0:4:8.98:0,9,94	0/1:23,6:14:99:306,0,197	1/1:3,3:5:9.03:156,9,0	0/0:13,0:6:6.02:0,6,97	0/1:10,5:7:82.18:167,0,82	0/0:14,0:6:8.49:0,8,80	0/0:14,0:9:18.06:0,18,290	1/1:9,0:6:10.36:49,10,0	0/0:39,0:24:19.13:0,19,598	0/1:15,3:9:62.83:63,0,114	0/0:17,0:3:8.99:0,9,117	0/0:8,0:4:8.41:0,8,73	0/0:20,0:10:15:0,15,213	0/1:11,3:10:44.08:168,0,44	1/1:3,4:5:9.03:158,9,0	0/1:15,4:9:52.49:110,0,52	0/1:9,4:10:27.53:308,0,28	0/0:19,0:4:7.58:0,8,102	0/0:16,0:10:26.88:0,27,288	0/0:9,0:7:11.07:0,11,153
chr10	91746694	.	CCT	C	91.42	PASS	AB=0.928;AC=5;AF=0.125;AN=40;BaseQRankSum=0.757;DP=589;FS=0.000;HRun=0;HaplotypeScore=59.9943;InbreedingCoeff=0.0931;MQ=14.98;MQ0=286;MQRankSum=0.662;QD=0.53;ReadPosRankSum=-1.729;VQSLOD=1.1527;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,5:18:33.09:0,33,520	0/0:10,0:6:15.05:0,15,266	./.	./.	0/0:10,0:3:3.76:0,4,17	0/0:17,0:7:14.42:0,14,79	0/0:31,0:13:22.23:0,22,160	./.	./.	0/0:22,1:6:15.05:0,15,249	0/0:11,0:4:12.04:0,12,197	./.	0/0:21,2:7:18.06:0,18,321	./.	0/0:20,0:7:18.53:0,19,349	0/0:14,0:7:17.59:0,18,127	0/1:58,1:22:18.56:19,0,375	0/0:41,0:6:12.04:0,12,223	0/1:18,1:3:19.10:58,0,19	./.	0/1:33,7:10:9.26:9,0,59	0/0:13,4:5:9.03:0,9,167	0/0:8,0:2:3.01:0,3,58	1/1:40,14:15:2.38:107,2,0	0/0:13,0:8:20.10:0,20,345	0/0:20,0:2:6.02:0,6,113	0/0:7,0:4:10.80:0,11,57	./.
chr10	91746789	.	TTC	T	235.63	PASS	AB=1.000;AC=13;AF=0.250;AN=52;BaseQRankSum=2.298;DP=419;FS=17.947;HRun=0;HaplotypeScore=68.3621;InbreedingCoeff=0.4209;MQ=26.23;MQ0=93;MQRankSum=-0.395;QD=2.68;ReadPosRankSum=-1.118;VQSLOD=-0.0568;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,1:8:16.06:0,16,87	0/0:3,0:3:5.25:0,5,22	0/0:48,0:13:36.11:0,36,464	0/0:52,0:12:29.95:0,30,386	1/1:7,0:5:0.32:1,0,0	0/0:10,0:8:21.40:0,21,231	0/0:28,0:20:21.36:0,21,322	0/0:22,0:12:7.15:0,7,199	0/1:11,0:8:19.38:21,0,19	0/0:7,0:2:3.01:0,3,39	0/0:8,0:6:12.04:0,12,153	1/1:8,1:5:8.96:97,9,0	0/0:9,0:6:16.60:0,17,196	1/1:9,0:5:5.96:47,6,0	0/0:14,1:8:23.07:0,23,128	0/0:10,3:7:16.29:0,16,161	0/0:24,2:16:17.82:0,18,152	0/0:15,0:6:11.52:0,12,132	0/1:23,0:8:14.24:14,0,182	0/0:7,0:5:3.01:0,3,39	./.	0/0:8,0:3:4.26:0,4,41	./.	0/0:22,1:11:14.15:0,14,194	0/0:9,0:6:11.41:0,11,91	0/1:16,0:9:18.01:88,0,18	1/1:6,0:3:2.88:15,3,0	1/1:7,0:4:11.98:98,12,0
chr10	91746805	.	CCTCTCTCTCTCTCTCTCT	C	1595.14	PASS	AB=0.692;AC=13;AF=0.295;AN=44;BaseQRankSum=3.295;DP=346;FS=8.541;HRun=0;HaplotypeScore=109.3363;InbreedingCoeff=0.4831;MQ=29.71;MQ0=36;MQRankSum=-1.991;QD=20.19;ReadPosRankSum=2.455;VQSLOD=1.6122;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:8:9.03:0,9,562	0/0:4,0:4:6.02:0,6,262	./.	0/0:52,0:12:3:0,3,26	./.	1/1:7,0:8:9.03:335,9,0	1/1:19,1:17:3.01:144,3,0	0/0:21,0:14:4.24:0,4,27	0/0:11,0:8:6.02:0,6,284	0/0:5,0:3:0:0,0,0	./.	0/0:8,0:4:1.55:0,2,4	1/1:6,1:6:3.01:146,3,0	0/0:7,0:4:3.01:0,3,105	0/0:12,0:12:9.50:0,10,523	1/1:9,2:7:6.02:289,6,0	0/0:18,0:18:18.06:0,18,953	1/1:6,1:4:3.01:146,3,0	0/0:14,0:7:12.03:0,12,551	0/0:6,0:6:6.02:0,6,383	0/0:5,0:3:0.34:0,0,1	./.	./.	1/1:14,0:11:3.01:126,3,0	0/1:5,3:7:1.52:538,0,2	0/0:12,0:9:24.07:0,24,1125	0/0:5,0:3:0.47:0,0,1	./.
chr10	91749859	.	TC	T	4377.54	PASS	AB=1.000;AC=54;AF=0.964;AN=56;BaseQRankSum=-5.947;DP=367;FS=0.963;HRun=10;HaplotypeScore=56.7156;InbreedingCoeff=0.1957;MQ=86.87;MQ0=1;MQRankSum=-5.306;QD=11.93;ReadPosRankSum=4.021;VQSLOD=4.1867;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,26:32:71.01:602,71,0	1/1:0,3:3:9:78,9,0	0/1:21,0:20:22.75:23,0,240	0/1:18,0:16:1.71:2,0,117	1/1:2,7:9:11.99:104,12,0	1/1:0,0:11:20.37:60,20,0	1/1:5,0:25:34.62:101,35,0	1/1:6,11:17:29.99:260,30,0	1/1:3,11:14:32.95:279,33,0	1/1:0,0:8:14.26:42,14,0	1/1:2,0:4:4.07:12,4,0	1/1:1,9:10:17.99:156,18,0	1/1:1,0:11:14.23:42,14,0	1/1:6,15:21:47.98:414,48,0	1/1:0,10:10:15:130,15,0	1/1:4,0:14:18.32:54,18,0	1/1:2,25:27:77.98:677,78,0	1/1:1,0:12:18.33:54,18,0	1/1:3,7:10:20.99:182,21,0	1/1:1,8:9:20.98:182,21,0	1/1:5,13:18:29.98:260,30,0	1/1:3,0:6:6.11:18,6,0	1/1:0,0:3:4.07:12,4,0	1/1:0,0:14:24.44:72,24,0	1/1:1,0:1:2.84:14,3,0	1/1:6,13:19:33.24:287,33,0	1/1:3,11:14:17.99:156,18,0	1/1:0,4:4:12:104,12,0
chr10	91750097	.	C	CTT	2340.72	PASS	AB=0.579;AC=21;AF=0.375;AN=56;BaseQRankSum=-0.671;DP=520;FS=6.163;HRun=13;HaplotypeScore=77.1955;InbreedingCoeff=0.8355;MQ=71.16;MQ0=7;MQRankSum=0.625;QD=13.85;ReadPosRankSum=-2.132;VQSLOD=2.1624;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:43:53.64:0,54,536	0/0:7,0:7:8.90:0,9,79	0/0:18,0:13:8.69:0,9,66	0/0:8,0:8:8.66:0,9,52	0/0:28,0:28:29.19:0,29,263	1/1:8,7:17:38.55:436,39,0	1/1:1,9:12:27.07:334,27,0	0/0:19,0:19:38.83:0,39,343	0/0:19,0:22:22.76:0,23,164	1/1:11,8:21:32.49:333,32,0	1/1:6,6:12:21.01:250,21,0	0/0:21,0:23:6.94:0,7,227	1/1:2,9:11:15.02:184,15,0	0/0:18,0:19:29.33:0,29,236	0/0:17,0:21:44.07:0,44,351	0/1:3,7:10:37.91:38,0,41	0/0:28,0:27:37.28:0,37,448	1/1:5,16:25:22.11:344,22,0	0/0:25,0:25:19.41:0,19,285	0/0:8,0:8:11.84:0,12,106	0/0:25,0:27:4.49:0,4,242	1/1:4,4:8:10.79:106,11,0	1/1:8,5:14:18.04:216,18,0	1/1:8,14:24:14.54:172,15,0	1/1:2,12:13:11.99:141,12,0	0/0:18,0:19:11.07:0,11,251	0/0:18,0:22:20.20:0,20,254	0/0:9,0:10:20.85:0,21,229
chr10	91751026	.	C	CAA	4754.19	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=5.316;DP=512;FS=17.661;HRun=0;HaplotypeScore=130.7301;InbreedingCoeff=0.8417;MQ=65.50;MQ0=10;MQRankSum=-7.477;QD=22.86;ReadPosRankSum=-4.914;VQSLOD=3.1691;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:99:0,99,1551	0/0:6,0:6:18.06:0,18,287	0/0:8,0:5:1.08:0,1,50	0/0:17,0:12:24.71:0,25,212	0/0:25,0:25:40.96:0,41,740	1/1:0,19:19:27.09:422,27,0	1/1:2,31:34:50.89:924,51,0	0/0:20,0:19:48.16:0,48,759	0/0:13,0:12:33.11:0,33,492	1/1:0,13:14:36.12:628,36,0	1/1:1,10:11:18.05:262,18,0	0/0:21,0:21:54.18:0,54,815	1/1:1,22:23:6:593,6,0	0/0:16,0:16:30.01:0,30,561	0/0:20,0:20:54.18:0,54,869	1/1:0,20:21:39.01:501,39,0	0/0:32,0:32:84.25:0,84,1263	1/1:1,12:13:3.08:374,3,0	0/0:17,0:17:34.07:0,34,606	0/0:13,0:13:33.11:0,33,510	0/0:33,0:32:51.99:0,52,898	1/1:0,12:12:27.05:388,27,0	1/1:1,6:8:12.04:169,12,0	1/1:2,15:16:21.03:295,21,0	1/1:2,13:15:11.99:129,12,0	0/1:19,0:18:70.05:70,0,625	0/0:14,0:14:26.83:0,27,404	0/0:11,0:11:27.09:0,27,412
chr10	91751033	.	GCA	G	2719.77	PASS	AC=44;AF=0.846;AN=52;BaseQRankSum=7.747;DP=496;FS=3.924;HRun=0;HaplotypeScore=132.3143;InbreedingCoeff=0.6926;MQ=58.43;MQ0=12;MQRankSum=-4.836;QD=7.08;ReadPosRankSum=1.958;VQSLOD=3.0082;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,1:35:18.22:0,18,460	0/0:5,0:5:6.02:0,6,69	./.	./.	1/1:12,12:24:24.06:262,24,0	1/1:10,0:16:16.95:82,17,0	1/1:21,0:26:17.04:84,17,0	1/1:17,4:19:9.79:78,10,0	1/1:6,7:12:20.73:229,21,0	1/1:8,0:10:5.55:28,6,0	1/1:5,0:11:8.56:43,9,0	1/1:13,10:22:33.03:339,33,0	1/1:9,1:22:39.90:213,40,0	1/1:4,13:17:27.07:296,27,0	0/0:20,1:21:12.24:0,12,415	1/1:10,0:19:20.57:108,21,0	0/0:30,1:31:4.95:0,5,480	1/1:9,0:14:14.20:70,14,0	1/1:13,5:17:14.14:153,14,0	1/1:10,3:14:8.81:79,9,0	1/1:15,17:31:23.80:262,24,0	1/1:8,0:11:5.72:29,6,0	1/1:4,0:6:4.21:26,4,0	1/1:17,0:19:8.52:42,9,0	1/1:12,0:15:4.27:25,4,0	1/1:18,4:21:26.95:242,27,0	1/1:8,9:16:11.43:112,11,0	1/1:7,4:11:6.01:66,6,0
chr10	91751338	.	TCA	T	5750.76	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-11.885;DP=765;FS=13.440;HRun=0;HaplotypeScore=157.2012;InbreedingCoeff=0.8941;MQ=65.46;MQ0=16;MQRankSum=4.713;QD=12.98;ReadPosRankSum=0.997;VQSLOD=3.9830;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:51:86.47:422,86,0	1/1:3,0:8:14.20:70,14,0	0/1:46,0:19:21.25:21,0,82	0/0:44,0:24:10.02:0,10,67	1/1:5,13:19:33.09:379,33,0	0/0:15,0:29:29.96:0,30,254	0/0:17,0:25:15.31:0,15,114	1/1:23,14:37:24.99:424,25,0	1/1:8,23:32:60:669,60,0	0/0:13,0:21:30.44:0,30,243	0/0:8,0:18:8.04:0,8,59	1/1:10,14:24:35.72:379,36,0	0/0:7,0:22:44.99:0,45,411	1/1:9,15:26:40.47:440,40,0	1/1:10,1:28:48.46:258,48,0	0/0:10,0:27:44.98:0,45,392	1/1:12,0:27:34.93:169,35,0	0/0:11,0:24:39.44:0,39,354	1/1:14,4:17:11.84:104,12,0	1/1:5,6:12:20.89:221,21,0	1/1:16,30:47:87.04:956,87,0	0/0:9,0:25:16.13:0,16,154	0/0:7,0:19:17.97:0,18,153	0/0:17,0:41:41.69:0,42,346	0/0:11,0:26:12.01:0,12,121	1/1:13,14:29:47.95:520,48,0	1/1:4,15:21:41.78:442,42,0	1/1:5,9:12:24.07:276,24,0
chr10	91753069	.	A	AT	1446.71	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.872;DP=555;FS=10.924;HRun=0;HaplotypeScore=80.5008;InbreedingCoeff=0.9238;MQ=81.31;MQ0=11;MQRankSum=-2.553;QD=17.02;ReadPosRankSum=3.438;VQSLOD=5.7569;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,32:38:70.30:698,70,0	1/1:0,4:4:7.54:72,8,0	0/0:54,0:24:44.69:0,45,485	0/0:35,0:22:22.98:0,23,176	0/0:21,0:21:63.12:0,63,781	0/0:21,0:21:51.15:0,51,642	0/0:17,0:17:39.11:0,39,484	0/0:34,0:34:99:0,102,1335	0/0:25,0:25:75.24:0,75,1019	0/0:11,0:11:33.07:0,33,400	0/0:22,0:22:66:0,66,755	0/0:12,0:12:36.11:0,36,476	0/0:10,0:10:21.07:0,21,279	0/0:13,0:13:39.11:0,39,510	1/1:1,17:18:36.70:382,37,0	0/0:12,0:12:33.11:0,33,428	1/1:6,19:25:5.33:442,5,0	0/0:18,0:18:39.12:0,39,490	0/0:24,0:24:63.91:0,64,840	0/0:19,0:19:57.18:0,57,774	0/0:12,0:12:36.11:0,36,483	0/0:5,0:5:9.45:0,9,82	0/0:15,0:15:36.01:0,36,447	0/0:18,0:18:48.14:0,48,606	0/0:19,0:19:51.16:0,51,659	0/0:24,0:24:69.19:0,69,877	0/0:23,0:23:69.22:0,69,939	0/0:6,0:6:18.06:0,18,246
chr10	91753070	.	AT	A	2763.03	PASS	AB=0.889;AC=23;AF=0.411;AN=56;BaseQRankSum=2.582;DP=550;FS=2.289;HRun=10;HaplotypeScore=73.7592;InbreedingCoeff=0.9084;MQ=80.82;MQ0=11;MQRankSum=-0.032;QD=14.70;ReadPosRankSum=2.722;VQSLOD=4.1607;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:38:77.07:0,77,405	0/0:4,0:4:8.58:0,9,44	0/0:54,0:24:38.43:0,38,347	0/0:34,0:21:23.78:0,24,174	0/0:21,0:21:54.06:0,54,544	1/1:1,19:20:44.98:390,45,0	1/1:0,16:16:35.99:312,36,0	0/0:33,0:34:77.98:0,78,794	0/0:25,0:25:57.12:0,57,609	1/1:0,11:11:32.96:278,33,0	1/1:3,19:22:47.65:405,48,0	0/0:12,0:12:30.07:0,30,321	1/1:3,7:10:12.88:106,13,0	0/0:13,0:13:39:0,39,403	0/0:19,0:19:36.93:0,37,185	1/1:1,11:12:29.99:260,30,0	0/0:22,0:24:34.08:0,34,282	1/1:1,17:18:35.99:311,36,0	0/0:24,0:24:47.99:0,48,476	0/0:19,0:19:25.06:0,25,471	0/0:12,0:12:33.07:0,33,354	1/1:0,5:5:8.91:64,9,0	1/1:2,13:15:26.99:234,27,0	1/1:4,13:17:32.93:279,33,0	1/1:3,15:18:38.98:338,39,0	0/1:21,3:24:10.97:11,0,451	0/0:22,1:23:43.08:0,43,665	0/0:6,0:6:17.99:0,18,174
chr10	91753463	.	T	TA	4116.79	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-10.561;DP=561;FS=2.171;HRun=11;HaplotypeScore=75.0222;InbreedingCoeff=0.9484;MQ=68.69;MQ0=0;MQRankSum=3.579;QD=18.54;ReadPosRankSum=-3.288;VQSLOD=3.4093;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:27:64.77:0,65,492	0/0:11,0:11:22.71:0,23,168	0/0:22,0:19:21.28:0,21,148	0/0:13,0:12:16.48:0,16,92	1/1:6,21:29:45.49:591,45,0	0/0:11,0:11:32.83:0,33,250	0/0:20,1:21:17.37:0,17,318	1/1:12,9:22:2.50:330,2,0	1/1:6,12:18:30.06:305,30,0	0/0:27,0:28:61.67:0,62,462	0/0:20,0:20:38.80:0,39,301	1/1:2,15:17:27.05:274,27,0	0/0:13,0:13:20.88:0,21,162	1/1:4,19:23:42.08:426,42,0	0/0:24,0:25:64.78:0,65,493	0/0:16,0:17:46.86:0,47,354	0/0:26,0:27:58.69:0,59,545	0/0:21,1:23:30.74:0,31,400	1/1:7,18:25:51.76:482,52,0	1/1:2,16:19:47.87:449,48,0	1/1:1,9:10:17.14:207,17,0	0/0:24,0:25:33.54:0,34,373	0/0:21,0:21:17.42:0,17,318	0/0:17,0:17:29.78:0,30,227	0/0:17,0:17:41.81:0,42,325	1/1:3,18:21:44.86:430,45,0	1/1:7,19:28:47.76:455,48,0	1/1:3,7:10:5.50:167,5,0
chr10	91753530	.	CA	C	5514.15	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=18.701;DP=626;FS=0.663;HRun=1;HaplotypeScore=112.1737;InbreedingCoeff=0.9994;MQ=85.33;MQ0=0;MQRankSum=-6.787;QD=27.43;ReadPosRankSum=3.954;VQSLOD=4.7814;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1556	0/0:17,0:17:51.12:0,51,752	0/0:21,0:21:60.20:0,60,921	0/0:23,0:23:69.09:0,69,1032	0/0:24,0:24:72.23:0,72,1123	1/1:2,14:16:47.51:430,48,0	1/1:0,7:7:21.03:207,21,0	0/0:28,0:28:84.28:0,84,1316	0/0:23,0:23:69.22:0,69,1080	1/1:3,26:29:84.14:868,84,0	1/1:0,16:16:48.06:473,48,0	0/0:20,0:20:48.16:0,48,767	1/1:0,15:15:45.03:424,45,0	0/0:30,0:30:81.25:0,81,1246	0/0:25,0:25:72.25:0,72,1145	1/1:1,19:20:60.08:602,60,0	0/0:30,0:30:90.27:0,90,1412	1/1:1,14:15:42.04:405,42,0	0/0:25,0:25:75.26:0,75,1199	0/0:28,0:28:84.27:0,84,1311	0/0:20,0:20:57.19:0,57,911	1/1:2,15:17:48.40:441,48,0	1/1:1,21:22:62.75:576,63,0	1/1:1,23:24:59.98:566,60,0	1/1:1,19:20:54.01:523,54,0	0/0:30,0:30:90.31:0,90,1436	0/0:30,0:30:84.29:0,84,1330	0/0:18,0:18:54.18:0,54,855
chr10	91753532	.	CA	C	4806.15	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=19.070;DP=625;FS=0.000;HRun=2;HaplotypeScore=114.2877;InbreedingCoeff=0.9997;MQ=84.94;MQ0=0;MQRankSum=-5.873;QD=24.40;ReadPosRankSum=4.368;VQSLOD=4.6201;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1440	0/0:15,0:15:45.15:0,45,673	0/0:21,0:21:57.17:0,57,791	0/0:23,0:23:68.81:0,69,880	0/0:24,0:24:69.21:0,69,989	1/1:1,14:15:44.11:360,44,0	1/1:1,7:8:23.97:209,24,0	0/0:26,0:26:78.24:0,78,1113	0/0:23,0:23:69.23:0,69,1034	1/1:2,26:28:83.98:771,84,0	1/1:0,16:16:47.95:424,48,0	0/0:20,0:20:48.16:0,48,719	1/1:0,15:15:44.90:378,45,0	0/0:29,0:29:78.25:0,78,1148	0/0:26,0:26:75.25:0,75,1101	1/1:0,19:19:56.95:505,57,0	0/0:31,0:31:93.28:0,93,1346	1/1:0,14:14:38.96:338,39,0	0/0:26,0:26:78.24:0,78,1109	0/0:31,0:31:87.22:0,87,1247	0/0:20,0:20:57.19:0,57,854	1/1:3,15:18:46.20:395,46,0	1/1:1,20:21:60.29:504,60,0	1/1:0,23:23:53.83:452,54,0	1/1:1,19:20:53.87:469,54,0	0/0:31,0:31:93.31:0,93,1389	0/0:30,0:30:84.27:0,84,1232	0/0:19,0:19:54.17:0,54,789
chr10	91754570	.	A	ACG	782.44	PASS	AB=0.947;AC=16;AF=0.286;AN=56;BaseQRankSum=5.646;DP=480;FS=48.226;HRun=0;HaplotypeScore=88.2831;InbreedingCoeff=0.2159;MQ=44.25;MQ0=31;MQRankSum=4.498;QD=3.71;ReadPosRankSum=3.745;VQSLOD=0.1905;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:24:17.56:18,0,78	0/0:10,0:10:8.19:0,8,62	0/0:15,0:3:9:0,9,83	0/0:26,0:6:11.97:0,12,106	0/0:20,0:18:20.92:0,21,170	1/1:22,0:22:2.83:14,3,0	0/1:17,0:17:12.03:12,0,13	0/0:27,0:24:62.36:0,62,451	0/0:7,0:6:8.99:0,9,75	0/1:21,0:20:20.99:255,0,21	0/1:18,0:17:32.48:82,0,32	0/0:15,0:13:14.76:0,15,84	1/1:9,0:7:3.44:39,3,0	0/0:10,0:10:5.49:0,5,42	0/0:17,0:14:11.20:0,11,121	1/1:10,0:10:12.41:157,12,0	0/0:26,0:26:48.86:0,49,346	0/1:9,24:33:24.75:25,0,95	0/0:21,0:18:40.04:0,40,316	0/0:15,0:15:21.08:0,21,158	0/0:19,0:17:20.06:0,20,149	1/1:11,0:9:8.99:74,9,0	0/1:13,0:13:1.91:115,0,2	0/1:16,0:16:38.27:99,0,38	0/1:14,0:11:18.74:58,0,19	0/0:16,0:14:32.31:0,32,229	0/0:14,0:13:28.85:0,29,208	0/0:10,0:7:17.18:0,17,126
chr10	91754578	.	ACACG	A	679.11	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=5.328;DP=479;FS=1.947;HRun=0;HaplotypeScore=96.0318;InbreedingCoeff=0.1992;MQ=45.16;MQ0=29;MQRankSum=0.463;QD=2.90;ReadPosRankSum=-0.653;VQSLOD=1.5100;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:24.38:0,24,280	0/0:11,0:11:9.88:0,10,119	0/1:15,0:4:1.84:2,0,23	0/0:27,0:6:7.65:0,8,72	0/0:19,0:17:26.91:0,27,273	1/1:24,0:24:2.77:16,3,0	0/0:4,14:18:2.96:0,3,19	0/0:26,0:23:37.26:0,37,301	0/0:8,0:6:7.86:0,8,63	1/1:20,1:20:2.86:323,3,0	0/1:18,0:17:43.72:44,0,79	0/0:15,0:13:7.02:0,7,156	1/1:8,0:6:9.73:64,10,0	0/0:9,0:9:5.81:0,6,91	0/1:16,0:13:4.76:5,0,200	1/1:7,1:8:13.36:134,13,0	0/1:27,0:27:14.08:14,0,378	0/1:31,0:31:8.70:9,0,103	0/0:24,0:21:7.23:0,7,324	0/0:15,0:15:20.31:0,20,342	0/0:19,0:17:19.49:0,19,161	1/1:10,1:9:8.74:72,9,0	0/1:12,0:12:4.87:64,0,5	0/1:15,0:15:6.59:7,0,82	0/1:14,0:12:54.96:80,0,55	0/0:19,0:17:16.99:0,17,354	0/1:14,0:13:10.60:11,0,124	0/0:10,0:7:20.78:0,21,323
chr10	91754580	.	ACG	A	1207.31	PASS	AB=0.996;AC=25;AF=0.446;AN=56;BaseQRankSum=7.210;DP=465;FS=1.820;HRun=0;HaplotypeScore=82.1531;InbreedingCoeff=0.2575;MQ=45.36;MQ0=26;MQRankSum=0.864;QD=4.41;ReadPosRankSum=0.279;VQSLOD=2.6244;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:7.22:0,7,192	0/1:11,0:11:10.94:11,0,82	0/1:15,0:4:1.84:2,0,23	0/0:28,0:6:7.68:0,8,72	0/0:19,0:17:26.77:0,27,224	1/1:1,23:24:2.88:46,3,0	0/0:16,1:17:2.96:0,3,19	0/0:24,0:21:53.39:0,53,372	0/0:8,0:6:7.95:0,8,63	1/1:19,1:19:18.80:347,19,0	1/1:15,2:16:11.23:202,11,0	0/1:15,0:13:1.42:1,0,94	1/1:8,0:6:9.73:65,10,0	0/0:9,0:9:2.25:0,2,51	0/1:16,0:13:14.54:15,0,139	1/1:8,0:8:20.96:172,21,0	0/1:25,0:25:31.46:31,0,304	0/1:29,1:30:45.60:52,0,46	0/1:22,0:20:8.92:9,0,272	0/0:15,0:15:18.29:0,18,246	0/0:17,0:15:1.48:0,1,120	1/1:11,0:9:8.98:72,9,0	1/1:10,1:11:15.79:138,16,0	1/1:14,0:14:2.25:103,2,0	0/1:13,0:12:2.55:105,0,3	0/0:19,0:18:8.59:0,9,276	0/1:14,0:13:10.39:10,0,102	0/0:10,0:7:20.78:0,21,255
chr10	91755551	.	TC	T	6667.80	PASS	AB=0.775;AC=22;AF=0.393;AN=56;BaseQRankSum=13.549;DP=525;FS=1.513;HRun=2;HaplotypeScore=52.7792;InbreedingCoeff=0.8500;MQ=74.93;MQ0=0;MQRankSum=-1.214;QD=31.90;ReadPosRankSum=4.293;VQSLOD=4.4914;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1711	0/0:11,0:11:30.09:0,30,421	0/1:11,0:10:15.06:15,0,265	0/0:23,0:22:56.32:0,56,784	0/0:15,0:15:45.13:0,45,619	1/1:0,21:21:60.20:777,60,0	1/1:0,25:25:60.20:777,60,0	0/0:30,0:30:87.23:0,87,1227	0/0:10,0:10:30.07:0,30,399	1/1:0,19:19:57.19:739,57,0	1/1:0,13:13:33.11:426,33,0	0/0:18,0:18:54.18:0,54,786	1/1:0,10:10:27.09:349,27,0	0/0:14,0:14:42.11:0,42,576	0/0:13,0:13:39.11:0,39,548	0/1:2,9:11:57.50:281,0,58	0/0:41,0:41:99:0,120,1655	1/1:0,26:26:66.21:855,66,0	0/0:17,0:17:48.16:0,48,701	0/0:15,0:15:45.10:0,45,619	0/0:20,0:20:60.18:0,60,837	1/1:0,12:12:33.11:427,33,0	1/1:1,12:13:30.10:388,30,0	1/1:0,29:29:69.22:894,69,0	1/1:0,19:19:57.19:738,57,0	0/0:18,0:18:15.44:0,15,706	0/0:16,0:16:48.11:0,48,641	0/0:14,0:14:42.12:0,42,593
chr10	91755699	.	AT	A	2324.62	PASS	AB=0.526;AC=21;AF=0.404;AN=52;BaseQRankSum=11.470;DP=326;FS=0.996;HRun=9;HaplotypeScore=39.3320;InbreedingCoeff=0.8906;MQ=60.52;MQ0=2;MQRankSum=1.360;QD=18.16;ReadPosRankSum=1.183;VQSLOD=3.2196;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:72.02:0,72,797	0/0:2,0:2:6.02:0,6,69	./.	./.	0/0:17,0:17:45.13:0,45,518	1/1:4,15:19:42.02:384,42,0	1/1:3,7:9:12:110,12,0	0/0:21,0:20:51.15:0,51,586	0/0:6,0:6:12.04:0,12,139	1/1:3,13:16:35.88:316,36,0	1/1:2,11:13:26.97:239,27,0	0/0:5,0:5:15.04:0,15,173	1/1:0,3:3:9:82,9,0	0/0:6,0:6:12.04:0,12,139	0/0:9,0:9:24.07:0,24,277	0/1:1,9:10:4.60:217,0,5	0/0:28,0:28:72.20:0,72,822	1/1:3,12:15:36.02:329,36,0	0/0:14,0:15:29.91:0,30,319	0/0:16,0:16:42.12:0,42,476	0/0:10,0:10:24.07:0,24,277	1/1:3,3:6:10.24:85,10,0	1/1:1,9:10:21.01:192,21,0	1/1:2,12:14:27.01:247,27,0	1/1:0,12:12:36.02:329,36,0	0/0:13,0:13:27.08:0,27,309	0/0:9,0:10:23.90:0,24,256	0/0:11,0:11:30.09:0,30,344
chr10	91755923	.	CT	C	3996.31	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=14.949;DP=480;FS=13.829;HRun=2;HaplotypeScore=69.6615;InbreedingCoeff=0.9350;MQ=52.45;MQ0=23;MQRankSum=-6.839;QD=32.23;ReadPosRankSum=-0.071;VQSLOD=1.9919;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,1998	0/0:7,0:7:21.07:0,21,315	0/0:32,1:9:24.04:0,24,320	0/0:54,0:15:34.90:0,35,544	0/0:18,0:18:54.18:0,54,808	1/1:1,7:8:18.06:227,18,0	1/1:0,11:10:24.08:307,24,0	0/0:17,0:17:42.14:0,42,629	0/0:14,0:14:42.12:0,42,607	1/1:0,14:14:42.14:543,42,0	1/1:0,5:5:12.04:155,12,0	0/0:9,0:9:27.08:0,27,386	1/1:1,12:13:36.12:467,36,0	0/0:7,0:7:21.07:0,21,315	0/0:12,0:12:36.12:0,36,540	1/1:0,9:9:27.09:347,27,0	0/0:29,1:30:51.45:0,51,1245	1/1:1,22:22:60.11:738,60,0	0/0:19,0:17:51.17:0,51,741	0/0:16,0:16:48.16:0,48,719	0/0:42,0:42:99:0,120,1798	1/1:0,12:12:30.09:371,30,0	1/1:0,4:4:9.03:114,9,0	1/1:0,16:16:45.15:580,45,0	1/1:0,4:4:12.04:146,12,0	0/0:21,0:21:60.19:0,60,877	0/0:10,0:10:30.10:0,30,444	0/1:5,0:5:1.74:2,0,165
chr10	91756964	.	TTCC	T	3150.07	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-2.976;DP=410;FS=3.066;HRun=0;HaplotypeScore=118.2957;InbreedingCoeff=0.8949;MQ=47.52;MQ0=14;MQRankSum=-5.049;QD=24.42;ReadPosRankSum=-1.567;VQSLOD=3.5812;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:46.95:0,47,563	0/0:2,0:2:6.02:0,6,84	0/0:13,0:3:8.98:0,9,124	0/0:17,0:9:14.65:0,15,234	0/0:18,0:17:22.74:0,23,325	1/1:9,1:10:30.10:432,30,0	1/1:14,0:12:20.82:244,21,0	0/0:34,0:33:50.97:0,51,600	0/0:9,0:8:14.45:0,14,162	1/1:9,2:10:18.06:270,18,0	1/1:10,0:9:14.94:155,15,0	0/0:19,0:18:31.90:0,32,355	1/1:10,3:13:36:441,36,0	0/0:12,0:12:20.83:0,21,235	0/1:8,0:8:0.14:0,0,180	1/1:8,6:14:39.11:568,39,0	0/0:9,0:8:10.17:0,10,117	1/1:5,1:5:14.98:179,15,0	0/0:17,0:11:18.21:0,18,199	0/0:14,0:14:17.91:0,18,159	0/0:38,0:36:42.20:0,42,544	1/1:6,1:7:12.01:143,12,0	1/1:8,0:8:20.98:234,21,0	1/1:15,2:16:32.50:360,32,0	1/1:11,0:11:27.06:341,27,0	0/0:26,1:26:15.18:0,15,514	0/0:14,0:13:7.01:0,7,140	0/0:10,0:10:12.49:0,12,142
chr10	91756968	.	TCTTCC	T	1701.58	PASS	AB=0.905;AC=17;AF=0.304;AN=56;BaseQRankSum=0.802;DP=412;FS=2.546;HRun=0;HaplotypeScore=143.0340;InbreedingCoeff=0.5568;MQ=44.55;MQ0=26;MQRankSum=-3.354;QD=14.18;ReadPosRankSum=1.972;VQSLOD=3.3847;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:74.30:0,74,1087	0/0:2,0:2:6.02:0,6,130	0/0:13,0:3:9.03:0,9,184	0/0:16,0:8:17.64:0,18,335	0/0:18,0:17:35.67:0,36,586	1/1:9,2:10:24.70:231,25,0	1/1:9,4:11:17.26:160,17,0	0/0:38,0:35:91.23:0,91,1285	0/0:10,0:9:20.98:0,21,313	0/1:10,1:10:48.54:122,0,49	1/1:6,1:6:5.33:64,5,0	0/0:18,0:16:35.64:0,36,523	1/1:13,0:13:31.09:267,31,0	0/0:13,0:12:22.58:0,23,364	0/0:11,0:8:23.66:0,24,358	1/1:8,5:13:39.11:578,39,0	0/0:9,0:8:19.48:0,19,276	0/1:5,2:6:3.56:108,0,4	0/0:19,0:10:26.50:0,27,347	0/0:12,0:12:23.87:0,24,317	0/0:37,0:35:53.85:0,54,889	0/1:7,0:7:42.92:43,0,53	0/1:9,1:10:34.08:34,0,82	1/1:12,4:15:22.49:202,22,0	0/1:11,1:12:43.20:84,0,43	0/0:27,0:25:65.53:0,66,1048	0/0:12,0:11:26.43:0,26,355	0/0:11,0:11:23.01:0,23,281
chr10	91756986	.	TCTTCC	T	177.61	PASS	AB=0.955;AC=10;AF=0.179;AN=56;BaseQRankSum=4.817;DP=431;FS=25.835;HRun=0;HaplotypeScore=135.6646;InbreedingCoeff=0.1054;MQ=29.87;MQ0=75;MQRankSum=-2.711;QD=2.22;ReadPosRankSum=2.949;VQSLOD=1.0815;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:23:57.01:0,57,817	0/0:5,0:5:6.02:0,6,112	0/0:36,0:7:13.35:0,13,159	0/0:38,0:8:16.56:0,17,326	0/0:17,0:15:25.70:0,26,497	0/1:7,1:4:7.60:38,0,8	0/1:9,0:8:22.31:22,0,45	0/0:36,0:27:69.23:0,69,1328	0/0:11,0:10:21.07:0,21,313	0/1:9,0:7:7.27:7,0,111	0/1:7,0:5:1.95:6,0,2	0/0:16,0:12:23.85:0,24,461	0/1:8,2:10:11.64:12,0,12	0/0:13,0:10:24.07:0,24,393	0/0:14,0:7:18.03:0,18,294	1/1:9,4:13:10.89:172,11,0	0/0:8,0:5:11.97:0,12,159	0/1:7,0:4:31.78:32,0,44	0/0:28,0:6:15.05:0,15,240	0/0:5,0:5:10.59:0,11,150	0/0:35,0:29:43.79:0,44,720	0/1:6,0:6:21.15:21,0,84	0/0:7,0:7:12.40:0,12,146	0/1:10,1:10:6.88:7,0,41	0/0:4,0:4:8.24:0,8,88	0/0:29,0:19:45.15:0,45,800	0/0:10,0:7:11.83:0,12,215	0/0:11,0:7:20.95:0,21,279
chr10	91756988	.	TTCC	T	635.77	PASS	AB=0.996;AC=32;AF=0.571;AN=56;BaseQRankSum=4.082;DP=424;FS=44.941;HRun=0;HaplotypeScore=121.5641;InbreedingCoeff=0.2896;MQ=29.18;MQ0=75;MQRankSum=1.391;QD=2.97;ReadPosRankSum=4.341;VQSLOD=0.5149;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,2:20:13.29:136,13,0	0/0:5,0:5:0:0,0,0	0/1:37,1:8:28.72:29,0,55	0/0:41,0:9:14.99:0,15,194	0/0:14,0:13:0.60:0,1,26	1/1:8,0:4:5.83:54,6,0	1/1:9,0:8:1.37:33,1,0	0/0:37,0:28:2.24:0,2,179	0/1:10,0:9:0.02:0,0,6	1/1:9,0:7:8.60:41,9,0	1/1:7,0:5:2.23:10,2,0	0/0:15,0:11:14.77:0,15,121	1/1:7,1:8:11.13:68,11,0	0/1:12,0:9:2.12:2,0,14	1/1:13,1:7:3.48:33,3,0	1/1:13,0:13:26.30:218,26,0	1/1:7,0:4:3:25,3,0	0/1:7,0:4:5.75:57,0,6	0/0:28,0:6:1.02:0,1,3	0/0:6,0:6:4.56:0,5,41	0/0:36,0:30:5.79:0,6,23	1/1:5,0:5:2.71:31,3,0	1/1:7,0:7:2.10:7,2,0	0/1:9,0:8:7.06:29,0,7	1/1:3,0:3:2.49:6,2,0	0/0:27,0:17:4.48:0,4,43	1/1:10,0:7:1.72:4,2,0	0/1:13,0:9:3.81:4,0,11
chr10	91756998	.	TCC	T	188.30	PASS	AB=0.762;AC=4;AF=0.071;AN=56;BaseQRankSum=3.538;DP=443;FS=6.673;HRun=2;HaplotypeScore=127.9997;InbreedingCoeff=-0.0761;MQ=25.43;MQ0=80;MQRankSum=-1.315;QD=6.49;ReadPosRankSum=1.844;VQSLOD=0.3065;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:16:30.19:0,30,226	0/0:5,0:5:6:0,6,62	0/0:63,0:9:16.59:0,17,234	0/0:60,0:9:24.07:0,24,419	0/0:13,0:12:26.41:0,26,354	0/0:8,0:4:10.51:0,11,84	0/0:7,0:6:8.92:0,9,83	0/0:32,0:22:51.10:0,51,712	0/0:10,0:9:21.06:0,21,264	0/1:8,2:8:57.65:58,0,68	0/0:6,0:4:4.59:0,5,43	0/0:16,0:12:23.88:0,24,333	0/0:5,0:5:11.90:0,12,93	0/0:12,0:9:24.06:0,24,306	0/0:12,0:5:11.05:0,11,108	0/0:13,0:13:29.16:0,29,244	0/0:6,0:3:5.80:0,6,33	0/0:9,0:6:9.84:0,10,100	0/0:23,0:5:14.98:0,15,190	0/0:5,0:5:9.03:0,9,142	0/0:32,0:25:32.64:0,33,336	0/1:5,1:6:10.19:44,0,10	0/1:5,4:9:28.70:131,0,29	0/0:7,0:6:8.68:0,9,92	0/1:2,2:4:45.51:64,0,46	0/0:25,0:14:36.03:0,36,482	0/0:9,0:6:8.79:0,9,112	0/0:12,0:8:21.06:0,21,269
chr10	91757007	.	TCC	T	335.76	PASS	AB=0.883;AC=8;AF=0.143;AN=56;BaseQRankSum=5.887;DP=424;FS=13.436;HRun=2;HaplotypeScore=120.3310;InbreedingCoeff=0.4171;MQ=22.51;MQ0=64;MQRankSum=0.782;QD=8.61;ReadPosRankSum=2.151;VQSLOD=-0.6529;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:12:22.67:0,23,145	0/0:4,0:4:3.01:0,3,32	0/0:82,0:9:22.25:0,22,275	0/0:71,0:7:21.07:0,21,364	0/0:10,0:10:26.56:0,27,289	0/1:7,0:4:0.13:0,0,28	0/0:6,0:6:8.51:0,9,61	0/0:26,0:20:45.05:0,45,630	0/0:10,0:8:18.05:0,18,211	1/1:8,1:8:13.13:132,13,0	0/1:3,2:3:9.44:23,0,9	0/0:14,0:11:21.07:0,21,335	0/0:4,0:4:9.72:0,10,61	0/0:10,0:8:20.40:0,20,169	0/0:11,0:5:7.23:0,7,49	0/0:11,0:11:21.39:0,21,122	0/0:3,0:1:2.84:0,3,14	0/0:8,0:6:11.75:0,12,76	0/0:15,0:5:15.03:0,15,158	0/0:5,0:5:9.03:0,9,135	0/0:25,0:18:14.44:0,14,107	1/1:3,2:5:8.35:70,8,0	0/1:7,2:9:2.09:160,0,2	0/0:4,0:4:8.78:0,9,53	0/1:4,0:4:6.49:83,0,6	0/0:25,0:15:38.97:0,39,433	0/0:9,0:7:5.71:0,6,48	0/0:11,0:9:24.05:0,24,290
chr10	91757010	.	T	TTG	445.83	PASS	AB=0.725;AC=6;AF=0.107;AN=56;BaseQRankSum=5.810;DP=412;FS=6.630;HRun=0;HaplotypeScore=118.3179;InbreedingCoeff=-0.1528;MQ=21.70;MQ0=55;MQRankSum=1.545;QD=11.73;ReadPosRankSum=-0.652;VQSLOD=2.9824;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:11:20.53:0,21,216	0/0:4,0:4:3.01:0,3,39	0/0:90,0:8:24.04:0,24,339	0/0:76,0:7:21.07:0,21,337	0/0:9,0:9:23.87:0,24,322	0/1:6,1:4:45.31:45,0,93	0/0:6,0:6:8.70:0,9,86	0/0:22,0:19:39.60:0,40,595	0/0:10,0:8:18.06:0,18,262	0/1:5,3:8:50.45:175,0,50	0/1:2,0:3:35.50:97,0,36	0/0:14,0:11:22.87:0,23,306	0/0:4,0:4:12.04:0,12,162	0/0:8,0:7:15.05:0,15,205	0/0:9,0:5:9.02:0,9,110	0/0:11,0:11:33.10:0,33,405	0/0:3,0:1:2.84:0,3,14	0/0:8,0:6:15.03:0,15,199	0/0:12,0:5:15:0,15,195	0/0:5,0:5:9.03:0,9,134	0/0:21,0:15:7.20:0,7,54	0/1:2,1:5:46.63:92,0,47	0/1:5,2:9:73.57:113,0,74	0/0:4,0:4:9.02:0,9,111	0/1:3,1:4:45.96:46,0,58	0/0:25,0:14:36.09:0,36,510	0/0:7,0:6:6.02:0,6,86	0/0:11,0:9:24.08:0,24,369
chr10	91757014	.	CTTCTTCT	C	4026.95	PASS	AB=0.937;AC=34;AF=0.630;AN=54;BaseQRankSum=1.765;DP=398;FS=66.749;HRun=0;HaplotypeScore=120.3966;InbreedingCoeff=-0.0628;MQ=21.05;MQ0=48;MQRankSum=2.980;QD=19.94;ReadPosRankSum=1.156;VQSLOD=0.7723;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:9:0.02:278,0,0	1/1:2,2:4:3.01:41,3,0	0/0:99,0:8:24.08:0,24,691	0/0:84,0:8:21.07:0,21,684	1/1:2,6:8:21.94:502,22,0	0/1:5,0:4:25.45:38,0,25	0/0:6,0:5:5.94:0,6,41	0/1:14,3:15:43.30:345,0,43	1/1:2,6:8:18.06:434,18,0	0/1:9,0:8:45.53:50,0,46	0/1:4,0:3:10.93:11,0,13	1/1:11,1:10:14.93:131,15,0	1/1:4,0:4:10.69:67,11,0	1/1:1,5:6:14.92:341,15,0	1/1:8,0:5:9.03:150,9,0	0/1:11,0:11:31.60:139,0,32	./.	0/1:8,0:6:18.53:19,0,105	0/1:5,2:4:28.04:165,0,28	0/1:4,1:5:31.85:113,0,32	1/1:7,12:14:2.68:76,3,0	0/1:5,0:5:29.09:46,0,29	0/1:9,0:9:25.82:26,0,103	0/0:4,0:4:8.70:0,9,50	0/1:4,0:4:13:13,0,35	1/1:13,6:14:29.19:589,29,0	1/1:3,4:6:5.62:159,6,0	0/1:8,3:9:9.07:293,0,9
chr10	91757015	.	TTC	T	281.57	PASS	AB=0.977;AC=18;AF=0.333;AN=54;BaseQRankSum=-0.083;DP=401;FS=40.072;HRun=0;HaplotypeScore=118.8404;InbreedingCoeff=-0.0709;MQ=21.00;MQ0=48;MQRankSum=3.208;QD=1.93;ReadPosRankSum=3.234;VQSLOD=0.5288;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:9:10.57:11,0,32	0/0:4,0:4:1.25:0,1,3	0/0:100,0:8:24.01:0,24,363	0/0:88,0:8:21.07:0,21,404	0/1:8,0:8:7.91:44,0,8	0/1:5,0:4:3.74:5,0,4	0/0:6,0:5:0.47:0,0,1	0/1:14,3:15:34.78:86,0,35	1/1:9,0:8:0.74:30,1,0	0/0:9,0:8:12.41:0,12,58	0/0:4,0:3:2.72:0,3,9	0/0:12,1:11:1.36:0,1,3	0/1:4,0:4:8.38:8,0,16	0/1:6,0:6:11.47:35,0,11	0/1:8,0:5:0.26:2,0,0	0/1:11,0:11:4.29:33,0,4	./.	0/0:8,0:6:10.32:0,10,101	0/1:6,1:4:27.42:47,0,27	0/1:4,0:4:16.26:16,0,34	1/1:19,0:14:2.37:8,2,0	0/0:5,0:5:2.05:0,2,18	0/0:9,0:9:13.65:0,14,43	0/0:4,0:4:2.80:0,3,13	0/0:4,0:4:0.65:0,1,11	0/1:19,0:14:44.63:45,0,103	1/1:7,0:6:5.38:25,5,0	0/1:11,0:9:20.99:21,0,110
chr10	91757017	.	CTTCT	C	2706.47	PASS	AB=1.000;AC=38;AF=0.704;AN=54;BaseQRankSum=1.351;DP=388;FS=78.759;HRun=0;HaplotypeScore=110.8880;InbreedingCoeff=0.2592;MQ=20.52;MQ0=44;MQRankSum=3.630;QD=15.29;ReadPosRankSum=0.597;VQSLOD=-0.2132;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,5:8:15.94:286,16,0	1/1:3,1:4:3.01:58,3,0	0/0:101,0:8:24.08:0,24,470	0/0:91,0:8:21.07:0,21,522	1/1:7,0:7:21.04:257,21,0	1/1:5,0:4:1.78:53,2,0	0/0:5,0:4:0.89:0,1,2	0/1:14,0:13:3.03:172,0,3	1/1:9,0:8:18.05:218,18,0	0/1:9,0:8:37.62:38,0,62	1/1:4,0:3:1.08:12,1,0	1/1:11,0:10:11.77:87,12,0	1/1:4,0:4:12.03:156,12,0	1/1:6,0:6:15.05:181,15,0	1/1:6,2:5:8.92:91,9,0	1/1:9,0:9:22.21:328,22,0	./.	0/1:5,0:4:40.44:56,0,40	0/1:7,0:4:6.10:90,0,6	0/1:4,0:4:7.37:60,0,7	1/1:18,0:14:2.85:46,3,0	0/1:5,0:5:19.57:64,0,20	0/0:9,0:9:3.11:0,3,105	1/1:4,0:4:2.09:6,2,0	0/0:4,0:4:6.29:0,6,38	1/1:17,0:14:34.52:332,35,0	1/1:7,0:6:5.75:77,6,0	1/1:11,0:9:19.54:197,20,0
chr10	91757020	.	CT	C	2285.82	PASS	AB=0.912;AC=39;AF=0.722;AN=54;BaseQRankSum=2.267;DP=376;FS=64.721;HRun=2;HaplotypeScore=101.2488;InbreedingCoeff=0.0804;MQ=20.44;MQ0=39;MQRankSum=3.042;QD=13.21;ReadPosRankSum=2.491;VQSLOD=-0.0946;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:8:18.01:196,18,0	1/1:4,0:4:3.01:40,3,0	0/0:105,0:8:24.07:0,24,344	0/0:93,0:9:24.08:0,24,371	1/1:6,1:7:20.93:206,21,0	0/1:2,1:3:7.95:46,0,8	0/0:4,0:4:2.96:0,3,19	0/1:10,2:11:30.05:107,0,30	1/1:7,2:8:18.05:226,18,0	0/1:9,0:8:22.93:58,0,23	0/1:3,0:3:7.89:35,0,8	1/1:3,7:9:8.88:83,9,0	1/1:1,4:4:11.50:107,12,0	1/1:5,1:6:14.92:145,15,0	1/1:4,1:4:3.48:42,3,0	1/1:4,4:8:3.86:154,4,0	./.	0/1:4,0:4:5.57:18,0,6	1/1:5,0:4:10.07:76,10,0	1/1:2,2:4:9.03:122,9,0	1/1:16,0:14:3:25,3,0	0/1:6,0:5:6.98:57,0,7	0/1:9,0:9:29.55:30,0,83	0/1:1,2:3:10.47:13,0,10	0/1:4,0:4:8.79:9,0,32	1/1:10,5:13:32.75:359,33,0	1/1:4,2:6:5.75:52,6,0	1/1:4,5:8:21.02:240,21,0
chr10	91757040	.	C	CT	346.88	PASS	AB=0.789;AC=8;AF=0.148;AN=54;BaseQRankSum=3.972;DP=338;FS=2.275;HRun=1;HaplotypeScore=110.2771;InbreedingCoeff=-0.0282;MQ=20.27;MQ0=58;MQRankSum=0.244;QD=6.94;ReadPosRankSum=2.540;VQSLOD=0.9414;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:7:15.89:0,16,163	0/0:4,0:3:2.71:0,3,17	0/0:56,0:3:5.98:0,6,58	0/0:54,0:3:5.95:0,6,76	0/0:10,0:8:14.31:0,14,178	0/1:4,1:5:1.53:39,0,2	./.	0/0:18,0:6:12.02:0,12,124	0/0:8,0:7:15.05:0,15,186	0/1:6,3:8:92.52:154,0,93	1/1:1,2:3:1.43:81,1,0	0/0:12,0:10:17.81:0,18,155	0/0:6,0:5:6.90:0,7,67	0/1:9,0:7:1.67:2,0,90	0/0:7,0:5:4.83:0,5,41	0/0:5,0:5:8.10:0,8,41	0/0:3,0:2:3.01:0,3,34	0/0:4,0:2:5.98:0,6,54	0/0:8,0:2:3.01:0,3,35	0/0:14,0:10:8.37:0,8,100	0/0:18,0:9:3.01:0,3,37	0/1:5,4:7:56.89:77,0,57	0/1:7,5:10:75:75,0,103	0/0:7,0:6:1.01:0,1,29	0/1:2,1:3:28.70:38,0,29	0/0:20,0:17:40:0,40,469	0/0:5,0:5:5.91:0,6,70	0/0:12,0:9:24.07:0,24,288
chr10	91757047	.	TC	T	204.63	PASS	AB=1.000;AC=8;AF=0.148;AN=54;BaseQRankSum=4.923;DP=312;FS=0.000;HRun=1;HaplotypeScore=109.7358;InbreedingCoeff=-0.0303;MQ=20.83;MQ0=59;MQRankSum=0.093;QD=2.73;ReadPosRankSum=3.473;VQSLOD=-0.3142;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:6:17.79:0,18,212	0/0:4,0:3:3:0,3,42	./.	0/1:38,0:2:0.57:1,0,37	0/0:12,1:11:12.73:0,13,102	0/1:6,0:5:26.98:27,0,27	0/0:7,1:5:5.34:0,5,23	0/0:21,0:7:20.86:0,21,245	0/0:8,0:8:17.87:0,18,191	0/1:8,0:7:52.89:88,0,53	0/1:5,0:5:37.63:57,0,38	0/0:6,4:9:0.40:0,0,77	0/0:6,0:5:6.48:0,6,59	0/0:10,0:7:8.83:0,9,79	0/0:8,0:6:8.86:0,9,61	0/0:2,0:2:0.04:0,0,4	0/0:4,0:3:2.99:0,3,25	0/0:6,0:3:8.98:0,9,78	0/0:9,0:2:6.02:0,6,84	0/0:14,1:11:14.87:0,15,133	0/0:16,0:7:3.01:0,3,45	0/1:7,0:5:21.45:59,0,21	0/1:10,0:8:56.68:57,0,62	0/0:13,0:10:20.08:0,20,129	1/1:1,0:1:3.01:36,3,0	0/0:24,1:17:26.81:0,27,314	0/0:3,1:4:1.82:0,2,5	0/0:12,0:9:23.71:0,24,221
chr10	91757049	.	TTCCTC	T	69.10	PASS	AB=0.894;AC=3;AF=0.056;AN=54;BaseQRankSum=0.672;DP=322;FS=0.000;HRun=0;HaplotypeScore=121.2980;InbreedingCoeff=-0.0751;MQ=21.12;MQ0=60;MQRankSum=0.608;QD=1.41;ReadPosRankSum=1.547;VQSLOD=2.0452;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:7:18.04:0,18,221	0/0:6,0:4:3.01:0,3,43	./.	0/0:33,0:2:5.99:0,6,62	0/0:13,1:11:14.42:0,14,99	0/0:7,0:6:14.98:0,15,143	0/0:9,0:6:8.31:0,8,62	0/0:22,0:8:24.04:0,24,334	0/0:9,0:8:8.42:0,8,166	0/0:9,0:8:17.51:0,18,155	0/0:6,0:5:14.74:0,15,146	0/1:6,4:9:31.72:89,0,32	0/0:5,0:4:5.98:0,6,63	0/1:10,0:7:10.66:11,0,36	0/0:10,0:7:9.89:0,10,103	0/0:2,0:2:6.01:0,6,62	0/0:4,0:3:5.95:0,6,47	0/0:7,0:3:8.95:0,9,78	0/0:9,0:2:6.02:0,6,81	0/0:14,1:11:4.14:0,4,158	0/0:20,0:9:2.97:0,3,42	0/0:7,0:5:14.20:0,14,141	0/0:10,0:8:20.34:0,20,201	0/0:13,0:10:26.70:0,27,244	0/0:2,0:2:5.98:0,6,48	0/1:28,1:20:63.47:63,0,272	0/0:3,1:4:1.82:0,2,5	0/0:12,0:9:18.75:0,19,220
chr10	91757050	.	T	TCA	379.85	PASS	AB=0.798;AC=8;AF=0.148;AN=54;BaseQRankSum=6.016;DP=329;FS=4.496;HRun=0;HaplotypeScore=122.6724;InbreedingCoeff=-0.0292;MQ=21.36;MQ0=61;MQRankSum=-0.540;QD=7.45;ReadPosRankSum=2.533;VQSLOD=3.4063;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:9:17.72:0,18,170	0/0:6,0:4:2.98:0,3,22	./.	0/0:29,0:2:3.01:0,3,43	0/0:12,0:11:14.84:0,15,153	0/1:6,1:6:34.99:35,0,62	0/1:9,0:6:2.64:3,0,15	0/0:23,0:8:24:0,24,281	0/0:9,0:9:11.42:0,11,141	0/1:6,3:8:56.81:126,0,57	0/1:4,2:5:83.88:84,0,85	0/0:10,0:9:18.02:0,18,192	0/0:5,0:4:6.01:0,6,69	0/0:9,0:7:8.96:0,9,87	0/0:11,0:7:5.45:0,5,59	0/0:2,0:2:5.52:0,6,25	0/0:4,0:3:3.01:0,3,44	0/0:8,0:4:9.03:0,9,121	0/0:10,0:3:6.02:0,6,84	0/0:15,0:12:20.92:0,21,217	0/0:20,0:9:2.97:0,3,44	0/1:4,3:5:69.21:97,0,69	0/1:6,4:8:79.91:97,0,80	0/0:13,0:10:25.59:0,26,231	1/1:2,1:3:4.36:61,4,0	0/0:27,0:21:33.08:0,33,404	0/0:4,0:4:1.82:0,2,5	0/0:13,0:10:15.05:0,15,220
chr10	91757059	.	TC	T	141.53	PASS	AB=0.844;AC=8;AF=0.148;AN=54;BaseQRankSum=5.633;DP=350;FS=6.604;HRun=2;HaplotypeScore=123.4586;InbreedingCoeff=-0.2057;MQ=21.77;MQ0=72;MQRankSum=1.066;QD=1.97;ReadPosRankSum=2.123;VQSLOD=-0.5553;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:10:1.84:2,0,123	0/0:7,0:5:3.88:0,4,28	./.	0/0:13,0:1:3:0,3,28	0/0:14,0:11:5.85:0,6,146	0/1:8,1:7:25.15:25,0,92	0/0:11,0:8:8.85:0,9,86	0/0:28,0:10:29.88:0,30,361	0/0:14,0:12:7.49:0,7,199	0/1:8,3:10:67.68:82,0,68	0/1:8,2:8:43.08:43,0,81	0/0:12,0:9:14.35:0,14,97	0/1:5,0:4:0.59:1,0,35	0/0:10,1:8:10.18:0,10,69	0/0:13,0:9:11.95:0,12,130	0/0:6,0:5:11.95:0,12,112	0/0:5,0:4:9.03:0,9,111	0/0:10,0:6:11.98:0,12,113	0/0:16,0:6:8.99:0,9,93	0/0:18,0:14:27.02:0,27,286	0/0:29,0:12:8.92:0,9,105	0/1:4,3:5:47.71:48,0,74	0/1:7,4:9:39.50:39,0,121	0/0:12,0:9:15.64:0,16,188	0/1:3,1:4:22.29:22,0,67	0/0:31,0:21:40.89:0,41,377	0/0:4,0:4:3.01:0,3,38	0/0:13,0:9:24.04:0,24,293
chr10	91757079	.	CTCT	C	310.94	PASS	AB=0.982;AC=24;AF=0.462;AN=52;BaseQRankSum=0.682;DP=362;FS=0.000;HRun=0;HaplotypeScore=148.4256;InbreedingCoeff=-0.1205;MQ=22.43;MQ0=65;MQRankSum=0.904;QD=1.16;ReadPosRankSum=4.235;VQSLOD=2.2584;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:12:3.26:21,3,0	1/1:6,0:4:5.88:36,6,0	./.	./.	0/1:20,0:17:20.72:21,0,96	1/1:9,0:7:5.40:30,5,0	0/1:10,1:8:14.74:15,0,52	0/0:22,0:9:8.33:0,8,169	0/1:18,0:14:2.67:3,0,44	0/1:15,0:12:11.26:11,0,61	0/1:12,0:10:10.96:11,0,44	0/1:14,0:9:13.58:50,0,14	0/1:8,0:7:29.39:29,0,43	0/1:9,0:7:11.28:11,0,21	0/0:13,0:10:13.43:0,13,82	0/1:6,0:5:1.40:1,0,28	0/1:5,0:4:4.50:5,0,12	1/1:8,1:5:6:58,6,0	0/0:21,0:12:23.77:0,24,168	0/1:21,0:15:13:13,0,42	0/1:29,0:13:17.09:17,0,19	0/0:12,0:10:12.40:0,12,68	1/1:12,0:10:1.86:23,2,0	0/1:14,2:11:8.04:73,0,8	0/0:8,0:8:19.78:0,20,123	0/1:31,0:21:36.80:37,0,93	0/0:3,0:3:5.95:0,6,42	0/0:14,0:10:17.24:0,17,119
chr10	91757088	.	T	TTCC	1401.12	PASS	AB=0.949;AC=27;AF=0.519;AN=52;BaseQRankSum=-0.777;DP=322;FS=0.000;HRun=0;HaplotypeScore=124.5453;InbreedingCoeff=-0.2039;MQ=22.68;MQ0=55;MQRankSum=2.113;QD=5.35;ReadPosRankSum=4.393;VQSLOD=2.3332;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:12:4.89:26,0,5	1/1:6,0:4:1.66:11,2,0	./.	./.	0/1:20,0:17:51.71:52,0,98	0/1:7,3:6:10:108,0,10	1/1:11,1:8:15:168,15,0	0/0:17,0:9:12.59:0,13,97	0/1:16,0:12:50.41:50,0,55	0/1:14,0:12:74.36:101,0,74	0/1:10,1:9:56.74:123,0,57	0/1:12,0:7:5.89:38,0,6	0/1:6,0:6:21.47:21,0,61	0/0:8,0:6:3.61:0,4,12	0/0:12,0:9:8.81:0,9,44	1/1:5,1:5:13.59:176,14,0	0/1:4,0:3:1.78:2,0,30	1/1:7,0:5:4.39:115,4,0	0/0:23,0:13:23.85:0,24,218	0/1:16,0:11:0.83:1,0,108	0/1:24,0:12:7.04:7,0,14	0/1:8,2:8:51.80:69,0,52	1/1:6,1:5:10.58:155,11,0	0/1:8,5:11:10.94:206,0,11	0/1:8,1:9:49.14:106,0,49	0/1:29,0:19:7.02:7,0,96	0/1:4,0:4:0.79:1,0,1	0/1:12,0:9:6.55:7,0,87
chr10	91757094	.	TTCC	T	940.16	PASS	AB=0.945;AC=26;AF=0.500;AN=52;BaseQRankSum=-3.837;DP=327;FS=19.017;HRun=0;HaplotypeScore=128.2812;InbreedingCoeff=-0.2413;MQ=22.82;MQ0=53;MQRankSum=1.888;QD=3.50;ReadPosRankSum=-0.689;VQSLOD=1.3862;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:30.36:34,0,30	0/0:6,0:4:3.84:0,4,20	./.	./.	0/1:20,0:16:45.52:46,0,173	1/1:10,0:6:4.16:41,4,0	0/1:8,4:8:17.71:119,0,18	0/1:21,1:9:11:56,0,11	0/1:17,0:13:39.42:47,0,39	0/1:17,1:15:48.79:78,0,49	0/1:9,2:9:26.87:77,0,27	0/0:10,0:6:2.24:0,2,6	0/1:6,1:6:23.75:24,0,70	0/1:8,0:6:0.86:1,0,13	0/1:13,0:10:5.94:6,0,11	1/1:3,3:5:11.24:135,11,0	0/1:4,0:3:21.95:22,0,48	1/1:7,0:5:8.49:76,8,0	0/1:21,0:13:13.06:13,0,57	0/1:17,0:12:0.09:0,0,140	0/0:27,0:15:9.02:0,9,39	0/1:8,1:9:47.16:47,0,59	1/1:6,0:5:10.46:65,10,0	1/1:13,1:11:11.07:74,11,0	0/1:9,1:10:84.13:107,0,84	0/1:24,0:17:26.04:26,0,96	0/0:4,0:4:9.02:0,9,97	0/0:11,0:8:14.71:0,15,128
chr10	91757100	.	CTCT	C	325.16	PASS	AB=0.911;AC=17;AF=0.327;AN=52;BaseQRankSum=-1.708;DP=324;FS=2.417;HRun=0;HaplotypeScore=130.9833;InbreedingCoeff=-0.1327;MQ=22.72;MQ0=52;MQRankSum=0.661;QD=1.72;ReadPosRankSum=2.049;VQSLOD=2.6579;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:12:7.10:39,7,0	1/1:6,0:4:2.90:17,3,0	./.	./.	0/1:14,5:15:97.54:98,0,290	0/0:9,0:6:3.41:0,3,37	0/1:11,0:9:17.96:39,0,18	0/1:23,0:7:31.96:32,0,32	0/1:8,8:12:61.07:108,0,61	0/0:19,0:17:3.74:0,4,182	0/0:13,0:11:2.14:0,2,106	0/0:7,2:6:7.59:0,8,34	0/1:7,0:6:7.79:8,0,149	0/0:7,1:6:8.47:0,8,65	0/0:8,0:7:0.51:0,1,8	0/1:5,0:5:6.34:43,0,6	0/1:4,0:3:2.64:3,0,29	1/1:6,0:5:2.28:12,2,0	0/0:22,0:11:11.91:0,12,117	0/1:15,2:12:13.14:13,0,245	0/1:22,4:14:13.97:14,0,19	0/0:10,0:10:17.53:0,18,177	0/0:5,0:7:3.19:0,3,36	0/0:14,0:11:8.84:0,9,87	0/1:11,0:11:12.09:12,0,204	0/1:19,3:15:29.08:29,0,174	0/0:3,0:3:9.03:0,9,146	0/0:10,0:7:11.42:0,11,130
chr10	91757121	.	TTCC	T	920.71	PASS	AB=0.870;AC=22;AF=0.458;AN=48;BaseQRankSum=-2.751;DP=327;FS=2.314;HRun=0;HaplotypeScore=120.8463;InbreedingCoeff=-0.3791;MQ=22.70;MQ0=57;MQRankSum=-0.662;QD=3.28;ReadPosRankSum=1.337;VQSLOD=2.3174;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,3:11:10.83:85,11,0	0/1:6,1:4:23.92:27,0,24	./.	./.	0/1:14,4:15:24.31:95,0,24	0/0:8,0:6:6.29:0,6,73	0/1:10,2:9:3.92:4,0,52	0/1:24,1:5:31.96:49,0,32	0/1:12,6:13:21.43:78,0,21	0/1:21,3:19:88.27:88,0,183	0/1:13,1:11:50.84:56,0,51	./.	0/1:7,2:8:45.81:46,0,84	./.	1/1:5,1:5:3.48:38,3,0	0/0:6,1:5:11.17:0,11,75	0/0:5,0:4:5.98:0,6,52	0/0:4,0:2:2.98:0,3,21	0/1:14,1:5:0.73:39,0,1	0/1:15,4:14:34.43:82,0,34	0/1:23,4:15:9.16:9,0,14	0/1:11,2:12:9.10:112,0,9	0/1:9,0:9:4.72:5,0,85	0/1:13,1:9:34.07:44,0,34	0/1:8,4:11:99:135,0,137	0/1:16,4:16:30.42:66,0,30	1/1:6,0:3:0.94:2,1,0	0/0:8,0:6:7.60:0,8,63
chr10	91757155	.	T	TTG	1938.78	PASS	AB=0.777;AC=16;AF=0.381;AN=42;BaseQRankSum=-1.265;DP=231;FS=37.459;HRun=0;HaplotypeScore=59.0850;InbreedingCoeff=0.4998;MQ=19.51;MQ0=85;MQRankSum=-0.537;QD=23.94;ReadPosRankSum=4.537;VQSLOD=2.0611;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:6:2.60:0,3,10	0/0:6,0:2:6.02:0,6,86	./.	./.	0/0:8,0:5:0.94:0,1,3	1/1:2,1:1:3.01:61,3,0	1/1:7,1:4:6.02:120,6,0	0/0:23,0:3:5.93:0,6,75	0/0:7,0:3:6.02:0,6,84	0/1:6,8:11:0.25:410,0,0	1/1:2,6:6:12.04:239,12,0	./.	1/1:3,4:6:11.85:232,12,0	./.	0/0:3,0:2:2.98:0,3,22	0/0:3,0:1:2.68:0,3,11	0/0:4,0:1:3.01:0,3,49	./.	0/0:13,0:1:2.84:0,3,14	0/0:14,0:9:12.85:0,13,148	0/0:25,0:8:9:0,9,109	1/1:2,11:12:18.06:357,18,0	1/1:0,6:6:9.03:182,9,0	./.	1/1:6,5:10:15.11:428,15,0	0/1:10,1:2:42.88:54,0,43	./.	0/0:5,0:3:8.88:0,9,76
chr10	91757164	.	T	TTG	251.43	PASS	AB=0.901;AC=8;AF=0.211;AN=38;BaseQRankSum=0.525;DP=179;FS=7.837;HRun=0;HaplotypeScore=63.5917;InbreedingCoeff=-0.1548;MQ=20.12;MQ0=63;MQRankSum=0.364;QD=3.40;ReadPosRankSum=-3.312;VQSLOD=-0.0140;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:3:1.55:0,2,4	0/0:4,0:2:6.02:0,6,91	./.	./.	0/0:7,0:4:0:0,0,0	0/0:3,0:1:2.94:0,3,18	0/1:6,1:3:12.76:42,0,13	0/0:17,0:3:5.93:0,6,65	0/0:7,0:3:5.51:0,6,58	0/1:12,0:9:23.29:23,0,115	0/1:6,0:6:15.69:42,0,16	./.	0/1:5,1:5:36.47:36,0,56	./.	./.	./.	0/0:3,0:1:3.01:0,3,47	./.	0/0:9,0:1:3:0,3,27	0/0:8,0:5:11.86:0,12,119	1/1:22,0:7:0.38:1,0,0	0/1:11,1:12:24.62:99,0,25	0/0:6,0:6:6.38:0,6,39	./.	0/1:6,3:8:59.52:110,0,60	0/0:10,0:2:6.01:0,6,75	./.	0/0:3,0:1:1.55:0,2,4
chr10	91757332	.	T	TTCC	2811.54	PASS	AB=0.846;AC=25;AF=0.500;AN=50;BaseQRankSum=-3.743;DP=307;FS=10.254;HRun=0;HaplotypeScore=60.5881;InbreedingCoeff=0.3090;MQ=33.39;MQ0=36;MQRankSum=1.743;QD=14.42;ReadPosRankSum=3.000;VQSLOD=1.7269;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:9:3.30:147,0,3	0/0:1,0:1:2.96:0,3,19	0/0:44,0:6:9:0,9,107	0/0:42,0:9:17.11:0,17,251	1/1:13,5:17:27.04:415,27,0	./.	0/0:3,0:1:3:0,3,29	0/1:25,0:9:2.19:21,0,2	1/1:14,5:18:2.90:270,3,0	0/0:4,0:4:7.36:0,7,29	./.	0/1:10,2:11:11.97:56,0,12	1/1:3,0:2:2.88:15,3,0	0/1:8,3:8:20.27:111,0,20	0/0:5,0:4:3:0,3,44	1/1:1,1:2:3.01:62,3,0	0/0:4,0:3:5.75:0,6,42	0/0:3,0:3:0:0,0,0	1/1:16,3:9:12.47:207,12,0	1/1:5,11:16:21.07:435,21,0	1/1:16,3:15:5.10:306,5,0	0/0:3,0:3:0.13:0,0,0	./.	1/1:3,0:1:1.55:4,2,0	0/0:2,0:2:3.15:0,3,11	0/1:16,10:23:13.13:626,0,13	1/1:6,2:7:11.89:160,12,0	1/1:2,2:3:6.02:124,6,0
chr10	91757346	.	CTTCTTT	C	534.02	PASS	AB=1.000;AC=18;AF=0.360;AN=50;BaseQRankSum=-0.568;DP=242;FS=0.806;HRun=0;HaplotypeScore=66.4741;InbreedingCoeff=0.0988;MQ=31.86;MQ0=38;MQRankSum=0.067;QD=4.49;ReadPosRankSum=-4.557;VQSLOD=-0.3588;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:6:22.83:23,0,141	0/0:1,0:1:2.96:0,3,19	0/0:31,0:3:7.24:0,7,112	0/0:41,0:9:16.32:0,16,339	0/1:13,0:12:87.66:88,0,172	./.	0/0:2,0:1:3.01:0,3,75	1/1:14,4:6:9.02:104,9,0	0/1:13,0:12:64.73:65,0,107	0/1:4,0:4:2.87:7,0,3	./.	0/0:6,0:5:6.02:0,6,122	1/1:3,0:2:2.04:6,2,0	0/0:9,0:6:8.98:0,9,145	0/0:2,0:2:3.01:0,3,70	1/1:2,0:2:2.94:18,3,0	0/0:6,0:5:6.27:0,6,212	0/0:2,0:2:0:0,0,0	0/1:14,0:6:6.69:7,0,199	0/0:16,0:15:8.20:0,8,363	1/1:16,0:13:19.78:160,20,0	0/1:3,0:3:2.31:23,0,2	./.	1/1:3,0:1:3.01:32,3,0	0/0:3,0:3:5.97:0,6,101	0/1:17,0:16:99:118,0,336	0/1:7,0:5:27.51:28,0,45	0/0:3,0:2:2.21:0,2,36
chr10	91757356	.	T	TTCC	327.89	PASS	AB=0.992;AC=18;AF=0.450;AN=40;BaseQRankSum=-1.406;DP=239;FS=5.073;HRun=0;HaplotypeScore=67.9431;InbreedingCoeff=-0.0512;MQ=29.42;MQ0=58;MQRankSum=-1.137;QD=2.60;ReadPosRankSum=-0.770;VQSLOD=1.2109;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:9:25.50:25,0,57	./.	./.	0/0:38,0:7:3:0,3,29	1/1:15,0:11:2.96:20,3,0	./.	0/0:3,0:1:3.01:0,3,43	./.	0/1:10,0:9:8.96:9,0,73	0/1:3,0:3:2.78:3,0,17	./.	0/0:3,0:3:3.01:0,3,43	1/1:2,0:2:2.96:19,3,0	0/1:9,0:7:12.17:17,0,12	0/0:1,0:1:2.88:0,3,15	./.	0/1:6,0:6:13.29:13,0,55	0/1:3,0:3:0.01:0,0,0	1/1:15,0:5:2.92:17,3,0	0/1:13,1:13:37.92:38,0,55	1/1:14,1:12:4.48:110,4,0	0/0:3,0:3:6.03:0,6,26	./.	0/0:5,0:2:2.67:0,3,15	0/0:3,0:3:3.01:0,3,43	0/1:14,0:12:58.72:104,0,59	1/1:6,2:5:5.57:71,6,0	./.
chr10	91757369	.	TCCTC	T	145.14	PASS	AB=0.744;AC=5;AF=0.119;AN=42;BaseQRankSum=3.925;DP=209;FS=0.000;HRun=0;HaplotypeScore=66.3309;InbreedingCoeff=0.1486;MQ=22.71;MQ0=60;MQRankSum=-0.511;QD=8.54;ReadPosRankSum=1.051;VQSLOD=2.1564;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:10:23.96:0,24,424	./.	./.	0/0:32,0:4:9.02:0,9,121	0/0:11,0:7:6:0,6,112	./.	0/0:3,0:1:3.01:0,3,86	0/0:17,0:4:2.88:0,3,15	0/0:8,0:7:9.03:0,9,230	0/1:3,1:3:46.50:68,0,46	./.	0/0:6,0:5:8.99:0,9,151	0/0:3,0:2:3.01:0,3,48	0/0:8,0:8:12.04:0,12,225	0/0:3,0:3:2.80:0,3,41	./.	0/0:7,0:7:16.55:0,17,254	0/1:4,1:4:0:0,0,0	0/0:9,0:4:12.01:0,12,155	0/0:13,0:11:18.53:0,19,410	0/0:14,0:11:8.75:0,9,156	0/1:1,2:3:11.51:110,0,12	./.	1/1:4,1:2:3:62,3,0	0/0:2,0:2:3.01:0,3,86	0/0:11,0:9:24.03:0,24,452	0/0:11,0:7:11.83:0,12,197	./.
chr10	91757373	.	CTTCTTT	C	398.52	PASS	AB=0.925;AC=17;AF=0.425;AN=40;BaseQRankSum=0.710;DP=190;FS=1.000;HRun=0;HaplotypeScore=62.1207;InbreedingCoeff=-0.1115;MQ=21.64;MQ0=61;MQRankSum=-0.255;QD=4.03;ReadPosRankSum=-3.978;VQSLOD=0.4805;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:10:0.42:0,0,364	./.	./.	0/0:30,0:2:3:0,3,29	1/1:10,0:6:8.64:49,9,0	./.	0/0:3,0:1:3.01:0,3,56	./.	0/1:6,1:6:8.96:9,0,166	0/1:3,0:3:12.38:40,0,12	./.	0/0:6,0:4:6.02:0,6,160	1/1:3,0:2:2.74:12,3,0	0/1:6,0:6:10.97:11,0,108	0/0:3,0:3:4.69:0,5,21	./.	0/1:7,1:8:99:100,0,122	0/1:5,0:4:0.10:0,0,0	1/1:6,1:2:2.96:19,3,0	0/1:10,2:10:32.42:32,0,133	1/1:12,3:11:18.31:166,18,0	0/1:3,0:3:16.74:56,0,17	./.	0/0:4,0:2:2.60:0,3,10	0/0:1,0:1:3.01:0,3,113	0/1:8,1:7:9.83:10,0,170	0/1:10,0:7:18.22:18,0,100	./.
chr10	91757383	.	T	TTCC	1005.63	PASS	AB=0.915;AC=22;AF=0.550;AN=40;BaseQRankSum=-3.118;DP=189;FS=2.580;HRun=0;HaplotypeScore=61.0897;InbreedingCoeff=-0.0242;MQ=21.55;MQ0=65;MQRankSum=-0.455;QD=7.23;ReadPosRankSum=-1.934;VQSLOD=1.9116;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:6,3:8:60.69:167,0,61	./.	0/1:20,0:1:0:0,0,0	./.	1/1:3,4:4:5.98:81,6,0	./.	0/1:4,0:2:0:0,0,0	./.	0/1:6,1:6:9.98:71,0,10	0/1:3,0:2:0:0,0,0	./.	0/1:5,1:4:34.37:71,0,34	0/0:4,0:3:3.01:0,3,43	1/1:5,2:7:6.02:122,6,0	1/1:2,2:3:3.01:61,3,0	./.	0/1:7,1:8:0.32:0,0,70	1/1:6,0:5:2.62:13,3,0	0/0:10,0:4:3.01:0,3,42	1/1:7,4:8:14.98:252,15,0	0/1:14,3:11:60.20:60,0,77	0/0:3,0:3:1.55:0,2,4	./.	1/1:5,0:3:0.47:1,0,0	0/0:1,0:1:3.01:0,3,43	0/1:13,1:10:24.63:170,0,25	0/1:11,0:7:31.79:48,0,32	./.
chr10	91757400	.	CTTCTTT	C	144.57	PASS	AB=0.980;AC=13;AF=0.260;AN=50;BaseQRankSum=3.022;DP=268;FS=0.997;HRun=0;HaplotypeScore=66.6579;InbreedingCoeff=-0.0006;MQ=24.76;MQ0=57;MQRankSum=-1.877;QD=1.61;ReadPosRankSum=-1.202;VQSLOD=1.4533;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:15:33.26:0,33,570	0/0:3,0:2:6.02:0,6,124	0/0:29,0:3:9.03:0,9,223	0/0:23,0:2:6.02:0,6,98	0/1:8,0:6:1.32:1,0,99	./.	0/1:4,0:2:12.47:12,0,28	0/0:21,0:5:9.03:0,9,244	0/0:8,0:7:10.45:0,10,140	1/1:3,0:2:3.01:35,3,0	./.	0/1:10,0:6:2.51:3,0,147	1/1:4,0:3:2.97:24,3,0	0/0:10,0:9:2.06:0,2,116	0/1:7,0:6:10.07:10,0,172	./.	0/1:10,1:9:47.47:47,0,307	1/1:5,0:4:2.72:34,3,0	0/0:17,0:11:1.63:0,2,465	0/0:15,0:14:21.69:0,22,489	0/1:20,0:13:57.30:57,0,202	0/0:1,0:1:1.82:0,2,5	0/0:4,0:3:0.94:0,1,10	0/0:4,0:3:2:0,2,11	0/0:2,1:2:3:0,3,63	0/1:16,1:13:45.99:46,0,576	0/0:11,0:8:8.96:0,9,169	0/0:3,0:2:3.01:0,3,31
chr10	91757410	.	T	TTCCTCC	2499.30	PASS	AB=0.964;AC=26;AF=0.500;AN=52;BaseQRankSum=-3.798;DP=336;FS=0.000;HRun=0;HaplotypeScore=81.8949;InbreedingCoeff=0.0280;MQ=27.73;MQ0=55;MQRankSum=-2.283;QD=10.68;ReadPosRankSum=-1.852;VQSLOD=1.7155;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:21:7.10:7,0,70	1/1:5,0:3:2.04:7,2,0	0/0:36,0:5:12.01:0,12,149	0/0:28,0:2:5.87:0,6,36	0/0:10,0:8:9.03:0,9,158	./.	0/0:2,0:2:1.46:0,1,26	0/1:29,0:7:70.55:73,0,71	0/1:11,1:12:47.54:227,0,48	0/1:4,0:3:4.61:30,0,5	0/1:2,0:2:0:0,0,0	1/1:4,4:8:9.03:291,9,0	0/0:4,0:3:3.01:0,3,32	1/1:6,5:13:8.93:263,9,0	0/0:8,0:6:7.04:0,7,32	1/1:4,0:4:2.96:19,3,0	0/0:13,0:10:11.64:0,12,74	1/1:8,0:4:2.34:12,2,0	0/1:19,3:15:42:465,0,42	0/1:20,0:18:99:304,0,201	0/1:20,3:17:9.60:278,0,10	./.	1/1:6,0:5:5.97:51,6,0	0/1:6,0:4:0.09:0,0,0	0/1:3,0:2:0:0,0,0	0/1:20,1:17:99:270,0,319	0/1:12,1:10:22.81:306,0,23	1/1:5,0:3:3.01:41,3,0
chr10	91757431	.	C	CTCT	1317.02	PASS	AB=0.963;AC=22;AF=0.423;AN=52;BaseQRankSum=1.926;DP=362;FS=7.869;HRun=0;HaplotypeScore=78.4272;InbreedingCoeff=0.0682;MQ=34.71;MQ0=26;MQRankSum=-2.987;QD=7.16;ReadPosRankSum=2.821;VQSLOD=1.5832;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:25,9:29:59.95:811,60,0	0/1:5,0:4:9.02:55,0,9	0/0:27,0:5:3.01:0,3,41	./.	0/0:10,0:9:17.99:0,18,188	./.	1/1:3,0:3:2.90:17,3,0	0/0:32,0:11:0.04:0,0,127	0/0:18,0:18:9.94:0,10,191	0/0:3,0:3:4.26:0,4,13	1/1:2,0:2:1.55:4,2,0	0/1:11,0:10:35.98:40,0,36	0/0:2,0:2:1.91:0,2,19	0/1:13,0:12:24.98:25,0,74	0/1:6,9:12:4.39:131,0,4	0/0:4,0:4:2.60:0,3,10	1/1:5,16:19:15.01:264,15,0	1/1:8,0:5:2.57:11,3,0	0/1:22,0:15:38.38:38,0,156	0/1:23,0:22:13.35:13,0,255	0/0:22,0:17:6.67:0,7,62	0/1:5,0:5:0.14:5,0,0	0/1:4,0:4:6.68:7,0,19	0/1:4,0:4:1.04:1,0,11	1/1:2,0:1:2.22:7,2,0	0/0:28,0:25:26.60:0,27,539	0/1:12,0:10:33.99:34,0,76	0/0:9,0:7:13.79:0,14,109
chr10	91757446	.	TTCC	T	199.67	PASS	AB=0.979;AC=19;AF=0.365;AN=52;BaseQRankSum=6.850;DP=340;FS=19.228;HRun=0;HaplotypeScore=87.5704;InbreedingCoeff=0.2467;MQ=39.29;MQ0=15;MQRankSum=-4.235;QD=2.06;ReadPosRankSum=-1.458;VQSLOD=0.2949;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:44.72:0,45,923	0/1:5,0:4:3.81:4,0,11	0/0:11,0:1:2.98:0,3,22	./.	0/0:10,0:10:27:0,27,356	./.	1/1:3,1:4:2.28:14,2,0	0/0:30,0:12:15.12:0,15,405	0/0:21,0:21:51.06:0,51,820	0/1:4,0:4:11.55:15,0,12	0/1:2,0:2:2.01:2,0,14	0/0:13,0:12:7.89:0,8,283	0/0:3,0:3:7.47:0,7,42	0/0:16,0:15:33:0,33,407	0/1:16,0:13:8.81:9,0,119	1/1:6,0:6:0.46:46,0,0	0/0:26,0:24:7.18:0,7,247	1/1:3,1:4:2.47:41,2,0	0/0:23,0:13:30.09:0,30,539	0/1:18,2:20:7.37:7,0,562	0/1:17,1:15:20.30:20,0,290	1/1:1,4:5:8.71:81,9,0	1/1:4,0:4:5.13:45,5,0	0/1:6,0:6:17.43:41,0,17	1/1:3,0:3:2.52:26,3,0	0/0:27,0:26:71.16:0,71,1123	0/0:11,0:11:14:0,14,379	0/0:12,0:10:27.06:0,27,380
chr10	91757467	.	TTCC	T	357.47	PASS	AB=0.784;AC=10;AF=0.192;AN=52;BaseQRankSum=8.010;DP=378;FS=37.201;HRun=0;HaplotypeScore=105.4126;InbreedingCoeff=-0.0329;MQ=42.48;MQ0=19;MQRankSum=-6.596;QD=5.77;ReadPosRankSum=1.673;VQSLOD=1.0198;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:93.05:0,93,1899	0/0:5,0:5:7.02:0,7,100	./.	./.	0/0:11,0:11:11.77:0,12,539	0/0:2,0:2:2.96:0,3,19	0/0:6,0:6:0.91:0,1,36	0/0:30,0:16:42.07:0,42,727	0/0:23,0:23:30.37:0,30,1104	0/1:5,3:7:38.17:91,0,38	0/1:2,2:4:14.36:29,0,14	0/0:14,0:13:30.08:0,30,533	0/1:5,1:5:8.99:9,0,99	0/0:23,0:22:45.02:0,45,777	0/0:22,0:20:39.11:0,39,695	1/1:9,2:10:1.40:72,1,0	0/0:31,0:29:51.15:0,51,995	0/1:3,1:4:24.75:53,0,25	0/0:18,0:11:25.86:0,26,486	0/0:21,0:21:0.65:0,1,752	0/0:18,0:15:24.14:0,24,401	0/1:11,0:11:70.98:71,0,77	0/1:4,2:5:31.02:69,0,31	0/1:3,4:6:0.06:73,0,0	0/1:4,1:5:24.07:24,0,40	0/0:30,0:29:23.27:0,23,1262	0/0:14,0:13:42.06:0,42,746	0/0:10,0:10:27.09:0,27,594
chr10	91757470	.	C	CTCT	495.06	PASS	AB=0.961;AC=14;AF=0.269;AN=52;BaseQRankSum=8.249;DP=388;FS=42.570;HRun=0;HaplotypeScore=110.5357;InbreedingCoeff=0.0581;MQ=42.87;MQ0=19;MQRankSum=-6.916;QD=4.85;ReadPosRankSum=0.148;VQSLOD=0.8015;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:76.81:0,77,1591	0/1:5,0:5:41.71:42,0,89	./.	./.	0/1:12,0:12:5.61:6,0,408	0/0:2,0:2:2.60:0,3,10	0/0:6,1:7:2.42:0,2,19	0/0:26,0:14:42.11:0,42,670	0/0:25,0:25:22.89:0,23,923	0/1:8,0:7:2.58:64,0,3	0/1:4,0:4:16.28:28,0,16	0/0:14,0:13:30.07:0,30,450	0/1:6,0:5:1.26:1,0,40	0/0:24,0:23:44.95:0,45,656	0/0:24,0:22:39.05:0,39,573	1/1:11,0:10:7.02:68,7,0	0/0:35,0:32:54.15:0,54,833	1/1:4,1:5:2.55:72,3,0	0/0:18,0:11:27.08:0,27,423	0/1:21,0:20:30.57:31,0,615	0/0:17,0:14:26.34:0,26,400	0/1:7,4:11:21.86:127,0,22	0/1:6,1:6:3.45:106,0,3	0/1:7,0:6:12.17:46,0,12	0/1:5,0:5:20.42:51,0,20	0/0:32,0:31:54.91:0,55,1130	0/0:14,0:13:42.06:0,42,625	0/0:9,0:9:27.09:0,27,460
chr10	91757479	.	TTCC	T	196.29	PASS	AB=0.867;AC=9;AF=0.173;AN=52;BaseQRankSum=8.162;DP=425;FS=55.217;HRun=0;HaplotypeScore=118.3819;InbreedingCoeff=0.0657;MQ=42.98;MQ0=21;MQRankSum=-6.376;QD=2.89;ReadPosRankSum=0.534;VQSLOD=-0.0801;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:42:99:0,111,2423	0/0:4,0:4:8.95:0,9,154	./.	./.	0/0:14,0:13:33.09:0,33,667	0/0:2,0:2:2.94:0,3,18	0/1:11,1:11:60.47:60,0,63	0/0:32,0:18:48.09:0,48,859	0/0:27,0:27:66.22:0,66,1424	0/1:10,2:10:54.36:102,0,54	0/1:4,1:5:4.77:5,0,30	0/0:16,0:15:30.10:0,30,616	0/1:6,1:6:7.31:7,0,131	0/0:24,0:23:47.97:0,48,936	0/0:26,0:24:42.08:0,42,854	0/1:8,2:9:23.18:33,0,23	0/0:34,0:31:57.20:0,57,1254	0/1:6,1:6:35.47:35,0,41	0/0:19,0:12:33.06:0,33,630	0/0:20,0:19:34.41:0,34,815	0/0:21,0:18:33.41:0,33,502	0/0:13,0:13:15.48:0,15,150	0/1:6,1:6:1.85:2,0,40	1/1:5,3:7:13.86:83,14,0	0/0:5,0:5:9.91:0,10,88	0/0:31,0:29:72.79:0,73,1637	0/0:15,0:14:39.07:0,39,821	0/0:9,0:9:27.09:0,27,621
chr10	91757491	.	TTCC	T	282.57	PASS	AB=0.937;AC=11;AF=0.212;AN=52;BaseQRankSum=8.158;DP=438;FS=57.512;HRun=0;HaplotypeScore=117.5509;InbreedingCoeff=0.0780;MQ=43.48;MQ0=27;MQRankSum=-7.394;QD=3.67;ReadPosRankSum=2.193;VQSLOD=0.1050;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:99:0,104,2140	0/0:6,0:5:1.45:0,1,145	./.	./.	0/0:21,0:19:39.13:0,39,781	0/0:2,0:2:3.01:0,3,36	0/0:13,0:12:0.44:0,0,190	0/0:35,0:17:39.02:0,39,570	0/0:29,0:29:65.63:0,66,1231	0/1:13,0:11:33.68:34,0,154	1/1:4,1:5:2.72:68,3,0	0/0:16,0:15:38.87:0,39,741	0/1:7,0:6:24.31:31,0,24	0/0:19,0:19:45.07:0,45,957	0/0:26,0:24:47.99:0,48,946	0/1:10,0:9:27.10:27,0,44	0/0:33,0:31:57.18:0,57,1174	1/1:6,1:5:3.77:75,4,0	0/0:20,0:12:30.09:0,30,552	0/0:17,0:16:33.11:0,33,693	0/0:20,0:18:41.35:0,41,775	0/1:10,4:14:67.47:67,0,201	0/1:7,1:7:8.23:47,0,8	0/1:7,1:7:5.35:59,0,5	0/1:5,0:5:12.49:12,0,54	0/0:32,0:31:86.90:0,87,1598	0/0:16,0:15:42.10:0,42,840	0/0:10,0:10:30.10:0,30,629
chr10	91757521	.	CTCT	C	409.39	PASS	AB=0.934;AC=13;AF=0.232;AN=56;BaseQRankSum=6.924;DP=449;FS=15.859;HRun=0;HaplotypeScore=105.8034;InbreedingCoeff=0.2066;MQ=42.02;MQ0=26;MQRankSum=-5.210;QD=4.31;ReadPosRankSum=0.428;VQSLOD=1.4170;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:81.03:0,81,1544	0/0:6,0:4:12.01:0,12,219	0/0:11,0:3:5.95:0,6,42	0/0:16,0:3:9:0,9,114	0/0:22,0:20:42.09:0,42,818	0/0:3,0:3:2.92:0,3,17	0/0:13,0:12:10:0,10,41	0/1:27,0:9:10.98:11,0,82	0/0:21,0:21:37.65:0,38,975	0/1:12,2:12:93.32:93,0,95	0/1:4,0:4:1.45:26,0,1	0/0:23,0:22:49.40:0,49,1075	0/1:8,0:7:32.44:77,0,32	0/0:19,0:19:51.08:0,51,938	0/0:27,0:24:57.17:0,57,1155	0/1:7,2:8:73.37:80,0,73	0/0:36,0:35:90.24:0,90,1791	0/1:7,0:5:9.76:10,0,28	0/0:19,0:13:36.05:0,36,655	0/0:23,0:22:54.08:0,54,972	0/0:22,0:21:56.32:0,56,1035	0/1:9,2:10:42.05:42,0,83	1/1:3,2:4:5.35:78,5,0	1/1:7,0:6:0.44:17,0,0	1/1:1,2:3:9.03:127,9,0	0/0:29,0:28:63.09:0,63,1456	0/0:24,0:20:54.03:0,54,944	0/0:8,0:7:17.99:0,18,228
chr10	91757525	.	T	TG	294.24	PASS	AB=0.764;AC=7;AF=0.125;AN=56;BaseQRankSum=6.658;DP=460;FS=39.367;HRun=0;HaplotypeScore=95.1670;InbreedingCoeff=-0.1616;MQ=41.72;MQ0=31;MQRankSum=-5.142;QD=4.75;ReadPosRankSum=-1.689;VQSLOD=1.4306;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.19:0,90,1210	0/0:7,0:5:15.01:0,15,187	0/0:16,0:3:6.02:0,6,84	0/0:22,0:3:9.03:0,9,126	0/0:22,0:20:44.96:0,45,577	0/0:3,0:3:4.83:0,5,41	0/1:7,5:11:55.21:105,0,55	0/0:24,0:8:9:0,9,104	0/0:22,0:22:57.18:0,57,783	0/1:10,4:12:98.38:98,0,178	0/0:3,1:4:5.93:0,6,42	0/0:23,0:22:54.18:0,54,755	0/1:6,2:7:28.71:29,0,96	0/0:20,0:20:53.90:0,54,706	0/0:25,0:22:57.19:0,57,796	0/1:7,2:8:41.12:41,0,82	0/0:36,0:35:96.29:0,96,1298	0/1:5,2:5:53.10:53,0,61	0/0:21,0:14:39.13:0,39,544	0/0:25,0:24:63.14:0,63,823	0/0:22,0:21:56.78:0,57,764	0/0:11,0:10:14.20:0,14,130	0/1:4,1:4:19.74:20,0,24	0/1:3,4:6:16.25:77,0,16	0/0:3,0:3:7.86:0,8,41	0/0:27,0:26:75.25:0,75,1035	0/0:25,0:21:57.17:0,57,771	0/0:7,0:6:18.06:0,18,245
chr10	91757527	.	TTCC	T	477.87	PASS	AB=0.926;AC=13;AF=0.232;AN=56;BaseQRankSum=8.316;DP=470;FS=27.713;HRun=0;HaplotypeScore=112.0270;InbreedingCoeff=0.1501;MQ=41.74;MQ0=31;MQRankSum=-7.166;QD=5.56;ReadPosRankSum=0.317;VQSLOD=0.9045;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:87.12:0,87,1697	0/0:7,0:5:15.05:0,15,285	0/0:17,0:3:8.98:0,9,103	0/0:24,0:3:9.03:0,9,175	0/0:22,0:20:45.15:0,45,928	0/1:4,0:4:1.51:2,0,2	0/1:11,0:10:14.11:14,0,14	0/0:23,0:8:6.02:0,6,110	0/0:22,0:22:17.73:0,18,1077	0/1:13,1:12:68.29:83,0,68	0/1:4,1:5:7.98:43,0,8	0/0:22,0:21:57.11:0,57,1148	0/1:7,2:8:44.16:130,0,44	0/0:20,0:20:51.16:0,51,1011	0/0:26,0:23:57.19:0,57,1214	0/1:11,0:10:49.62:50,0,83	0/0:36,0:35:96.28:0,96,2025	0/1:6,1:5:8.01:53,0,8	0/0:22,0:14:39.13:0,39,808	0/0:24,0:24:65.97:0,66,1182	0/0:23,0:22:44.39:0,44,1096	0/1:11,0:10:16.03:16,0,68	1/1:3,1:4:8.89:93,9,0	0/1:6,1:6:9.37:40,0,9	1/1:2,1:3:9.02:109,9,0	0/0:28,0:27:44.85:0,45,1522	0/0:25,0:21:51.16:0,51,1020	0/0:7,0:6:6.02:0,6,138
chr10	91757559	.	CTTCTT	C	471.59	PASS	AB=0.629;AC=12;AF=0.240;AN=50;BaseQRankSum=7.639;DP=430;FS=52.932;HRun=0;HaplotypeScore=127.3082;InbreedingCoeff=0.5057;MQ=44.24;MQ0=16;MQRankSum=-5.441;QD=16.84;ReadPosRankSum=0.625;VQSLOD=0.9741;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:79.57:0,80,2324	0/0:5,0:4:12.04:0,12,319	0/0:35,0:9:11.33:0,11,491	0/0:54,0:15:39.13:0,39,894	0/0:19,0:18:48.16:0,48,1252	1/1:1,1:2:5.61:49,6,0	./.	0/0:10,0:5:12.04:0,12,220	0/0:30,0:30:87.25:0,87,2038	0/1:1,2:3:26.75:69,0,27	0/1:1,1:2:10.32:27,0,10	0/0:19,0:19:48.16:0,48,1455	1/1:0,3:3:9.03:121,9,0	0/0:14,0:14:39.08:0,39,903	0/0:20,0:20:57.20:0,57,1487	0/1:2,3:5:6.24:121,0,6	0/0:31,0:30:86.77:0,87,2290	1/1:2,1:3:8.75:58,9,0	0/0:22,0:19:51.17:0,51,1381	0/0:27,0:27:78.20:0,78,2116	0/0:26,0:26:75.21:0,75,1862	1/1:2,3:5:7.26:75,7,0	./.	0/1:2,3:5:7.61:105,0,8	./.	0/0:30,0:29:87.16:0,87,2119	0/0:22,0:20:51.14:0,51,1263	0/0:2,0:2:6.01:0,6,61
chr10	91757567	.	T	TG	1169.28	PASS	AB=0.701;AC=20;AF=0.357;AN=56;BaseQRankSum=10.199;DP=441;FS=89.115;HRun=0;HaplotypeScore=98.4277;InbreedingCoeff=0.7120;MQ=44.97;MQ0=12;MQRankSum=-8.881;QD=22.93;ReadPosRankSum=-2.665;VQSLOD=-0.6160;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:96.30:0,96,1297	0/0:4,0:3:9.03:0,9,125	0/0:27,0:7:18.05:0,18,239	0/0:50,0:15:33.57:0,34,458	0/0:15,0:15:45.15:0,45,628	1/1:4,1:5:14.91:134,15,0	1/1:3,0:3:9.03:112,9,0	0/0:12,0:9:21.07:0,21,293	0/0:31,0:31:90.28:0,90,1234	0/1:5,2:7:23.68:161,0,24	1/1:1,1:2:3.01:36,3,0	0/0:21,0:21:51.17:0,51,711	1/1:2,3:5:15.03:162,15,0	0/0:15,0:15:42.10:0,42,535	0/0:21,0:21:57.18:0,57,779	1/1:5,3:8:24.07:285,24,0	0/0:32,0:31:90.27:0,90,1230	1/1:3,1:4:1.07:61,1,0	0/0:22,0:18:48.16:0,48,661	0/0:28,0:28:81.27:0,81,1130	0/0:26,0:26:69.23:0,69,959	1/1:4,3:7:17.81:149,18,0	1/1:2,0:2:5.93:64,6,0	0/1:2,3:5:9.40:86,0,9	1/1:3,0:3:8.96:112,9,0	0/0:27,0:26:78.26:0,78,1084	0/0:21,0:20:51.13:0,51,685	0/0:1,0:1:3.01:0,3,42
chr10	91757587	.	C	CTCCTCT	5005.76	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=1.585;DP=466;FS=47.310;HRun=0;HaplotypeScore=124.9740;InbreedingCoeff=0.9566;MQ=53.38;MQ0=8;MQRankSum=-7.992;QD=52.14;ReadPosRankSum=-1.023;VQSLOD=2.9044;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:81.85:0,82,1755	0/0:7,0:6:15.52:0,16,317	0/0:28,0:17:29.93:0,30,534	0/0:41,0:24:48.89:0,49,857	0/0:15,0:15:39.10:0,39,770	1/1:9,1:10:24.08:597,24,0	1/1:7,0:6:12.04:256,12,0	0/0:15,0:12:33.06:0,33,619	0/0:24,0:24:72.24:0,72,1614	1/1:14,0:14:33.10:707,33,0	1/1:4,0:4:12.03:208,12,0	0/0:19,0:19:45.07:0,45,923	1/1:9,0:9:27.06:570,27,0	0/0:17,0:17:48.03:0,48,920	0/0:17,0:17:48.15:0,48,1025	1/1:9,1:10:24.08:608,24,0	0/0:38,0:38:99:0,102,2085	1/1:9,1:10:21.05:469,21,0	0/0:16,0:15:36.12:0,36,775	0/0:25,0:25:72.18:0,72,1537	0/0:24,0:24:69.21:0,69,1424	1/1:9,1:10:27.06:562,27,0	1/1:4,0:4:9:169,9,0	1/1:13,0:13:30.09:567,30,0	1/1:5,0:5:15.01:291,15,0	0/0:27,0:26:11.36:0,11,1340	0/0:22,0:22:51.13:0,51,981	0/0:2,0:2:6:0,6,93
chr10	91759180	.	TA	T	3067.65	PASS	AB=0.992;AC=32;AF=0.571;AN=56;BaseQRankSum=-1.789;DP=389;FS=0.000;HRun=9;HaplotypeScore=76.3652;InbreedingCoeff=0.3018;MQ=74.12;MQ0=0;MQRankSum=0.077;QD=10.65;ReadPosRankSum=-4.104;VQSLOD=1.8935;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:25.44:0,25,188	0/0:2,0:2:4.72:0,5,17	0/0:21,0:13:20.18:0,20,214	0/1:11,0:9:0.14:0,0,46	0/1:23,0:23:22.99:23,0,121	1/1:1,10:11:21.01:192,21,0	1/1:0,15:15:36.02:329,36,0	0/0:27,0:27:26.67:0,27,156	0/1:6,0:6:13.08:56,0,13	1/1:5,21:26:68.11:572,68,0	1/1:2,25:27:69.04:630,69,0	0/1:5,0:5:10.27:10,0,22	1/1:1,15:16:33.02:301,33,0	0/1:5,0:5:14.01:14,0,18	0/0:2,0:2:4.72:0,5,16	1/1:2,8:10:24.01:219,24,0	0/1:32,0:32:0.47:0,0,142	1/1:4,9:13:32.56:272,33,0	0/1:14,0:14:16.88:17,0,66	0/1:21,0:21:22.11:22,0,107	0/0:5,0:4:7.85:0,8,32	1/1:2,3:5:10.56:86,11,0	1/1:0,8:8:23.85:206,24,0	1/1:0,2:2:5.84:41,6,0	1/1:8,8:16:29.18:239,29,0	0/1:14,0:14:18.93:19,0,55	0/0:12,0:12:9.27:0,9,92	0/1:7,0:7:5.46:5,0,46
chr10	91759387	.	GAGGC	G	9667.53	PASS	AB=0.990;AC=43;AF=0.768;AN=56;BaseQRankSum=-7.206;DP=669;FS=14.891;HRun=0;HaplotypeScore=151.7380;InbreedingCoeff=0.0826;MQ=59.13;MQ0=4;MQRankSum=0.164;QD=15.67;ReadPosRankSum=0.932;VQSLOD=3.6484;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:55,0:55:30.81:286,31,0	1/1:8,0:8:5.99:72,6,0	0/0:29,0:19:38.98:0,39,468	0/0:23,0:14:39.11:0,39,534	1/1:3,15:18:30.10:525,30,0	0/1:21,0:21:99:132,0,514	0/1:25,0:25:99:287,0,297	1/1:4,27:31:77.93:703,78,0	1/1:2,17:19:24.08:430,24,0	0/1:35,0:35:99:410,0,300	0/1:22,0:22:50.07:234,0,50	1/1:1,13:14:27.09:490,27,0	0/1:25,0:25:99:161,0,108	1/1:0,17:17:36.12:648,36,0	1/1:24,0:24:23.78:245,24,0	0/1:18,2:20:99:174,0,503	1/1:41,0:41:26.11:294,26,0	0/1:20,0:20:99:176,0,159	1/1:26,2:28:62.76:620,63,0	1/1:1,19:20:30.51:509,31,0	1/1:3,39:42:36.12:651,36,0	1/1:16,0:16:32.27:239,32,0	1/1:13,0:13:29.72:237,30,0	0/1:30,0:30:40.87:194,0,41	0/1:14,0:14:16.15:75,0,16	1/1:1,27:27:75.08:1166,75,0	1/1:0,25:25:31.29:547,31,0	1/1:0,6:6:9.03:163,9,0
chr10	91759390	.	GCAGGCAGACAGA	G	5963.61	PASS	AB=0.997;AC=21;AF=0.375;AN=56;BaseQRankSum=-11.861;DP=645;FS=8.113;HRun=0;HaplotypeScore=234.8180;InbreedingCoeff=-0.0103;MQ=58.52;MQ0=4;MQRankSum=-1.594;QD=14.27;ReadPosRankSum=-3.987;VQSLOD=1.8424;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,49:53:57.27:1595,57,0	1/1:0,8:8:9.03:282,9,0	0/0:27,0:18:38.98:0,39,849	0/0:23,0:14:39.11:0,39,763	0/0:18,0:18:30.10:0,30,701	0/1:22,0:22:99:104,0,1982	0/1:24,0:24:99:210,0,1221	0/1:27,0:27:99:425,0,351	0/0:17,0:17:24.08:0,24,560	0/1:35,0:35:99:259,0,1480	0/1:23,0:23:99:146,0,478	0/0:14,0:14:27.09:0,27,628	0/1:22,0:22:99:127,0,782	0/0:17,0:17:36.12:0,36,833	1/1:0,23:23:29.73:979,30,0	0/0:21,0:21:14.22:0,14,2334	1/1:0,37:37:27.09:979,27,0	0/1:20,0:20:99:100,0,902	0/1:24,0:25:99:322,0,244	0/0:20,0:20:31.77:0,32,796	0/0:39,0:39:36.12:0,36,839	0/1:15,0:15:99:101,0,136	0/1:13,0:13:99:118,0,182	0/1:29,0:29:99:125,0,656	0/1:14,0:14:55.60:56,0,166	0/1:28,0:27:36.73:37,0,1338	0/0:25,0:25:27.53:0,28,693	0/0:6,0:6:9.03:0,9,203
chr10	91759393	.	G	GACA	984.90	PASS	AB=0.875;AC=8;AF=0.143;AN=56;BaseQRankSum=2.233;DP=635;FS=6.299;HRun=0;HaplotypeScore=172.6443;InbreedingCoeff=-0.1772;MQ=58.28;MQ0=4;MQRankSum=-5.634;QD=5.53;ReadPosRankSum=-5.573;VQSLOD=0.3098;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:23.01:0,23,156	0/0:8,0:8:5.88:0,6,37	0/0:24,0:15:39.11:0,39,632	0/0:23,0:14:39.13:0,39,683	0/0:17,0:17:32.76:0,33,245	0/0:24,0:24:68.73:0,69,541	0/1:23,0:23:36.34:36,0,316	0/0:28,0:28:20.29:0,20,423	0/0:18,0:18:26.77:0,27,189	0/1:27,8:35:99:375,0,275	0/1:20,4:24:52.21:52,0,240	0/0:13,0:13:26.70:0,27,179	0/1:13,7:20:99:243,0,148	0/0:17,0:17:35.64:0,36,243	0/0:23,0:23:20.54:0,21,138	0/0:21,0:21:62.69:0,63,479	0/0:37,0:37:23.47:0,23,147	0/1:18,1:19:95.37:95,0,147	0/0:21,0:21:59.16:0,59,416	0/0:19,0:19:29.69:0,30,207	0/0:39,0:39:35.63:0,36,241	0/1:15,0:15:43.91:44,0,144	0/0:15,0:15:10.58:0,11,217	0/1:25,3:28:99:115,0,145	0/1:9,5:14:37.63:160,0,38	0/0:28,0:28:74.75:0,75,521	0/0:25,0:25:29.93:0,30,201	0/0:6,0:6:8.90:0,9,60
chr10	91759394	.	G	GACAGA	1672.32	PASS	AB=0.896;AC=10;AF=0.179;AN=56;BaseQRankSum=6.596;DP=633;FS=28.893;HRun=0;HaplotypeScore=190.4648;InbreedingCoeff=-0.2340;MQ=57.38;MQ0=4;MQRankSum=-7.812;QD=6.97;ReadPosRankSum=-2.638;VQSLOD=1.0974;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:51,0:51:77.72:78,0,227	0/0:8,0:8:5.99:0,6,71	0/0:23,0:14:39.12:0,39,600	0/0:23,0:14:42.14:0,42,599	0/0:18,0:18:32.74:0,33,362	0/0:24,0:24:2.83:0,3,511	0/0:24,0:24:63.66:0,64,486	0/0:28,0:28:77.03:0,77,424	0/0:19,0:19:24.43:0,24,259	0/1:26,8:34:99:558,0,155	0/1:20,4:24:99:160,0,121	0/0:13,0:13:27.08:0,27,336	0/1:11,6:19:89.83:394,0,90	0/0:17,0:17:33.47:0,33,383	0/1:23,0:23:13.75:14,0,206	0/0:21,0:21:58.30:0,58,594	0/0:37,0:37:5.26:0,5,258	0/1:18,1:19:95.95:185,0,96	0/0:21,0:21:59.72:0,60,389	0/0:19,0:19:33.50:0,33,378	0/0:39,0:39:35.14:0,35,416	0/1:14,0:14:29.04:29,0,129	0/1:15,0:15:9.61:10,0,118	0/1:24,3:27:87.54:88,0,110	0/1:9,5:14:17.36:299,0,17	0/0:28,0:28:77.13:0,77,802	0/0:25,0:25:30.13:0,30,371	0/0:6,0:6:9.03:0,9,112
chr10	91760044	.	AG	A	452.70	PASS	AB=0.556;AC=1;AF=0.018;AN=56;BaseQRankSum=3.182;DP=630;FS=3.635;HRun=2;HaplotypeScore=66.8151;InbreedingCoeff=-0.0187;MQ=86.06;MQ0=0;MQRankSum=-2.948;QD=22.63;ReadPosRankSum=0.452;VQSLOD=3.4799;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,2109	0/0:7,0:7:21.07:0,21,315	0/0:28,0:28:84.26:0,84,1181	0/0:24,0:24:69.10:0,69,972	0/0:14,0:14:35.88:0,36,538	0/0:17,0:17:45.15:0,45,667	0/0:37,0:37:99:0,108,1600	0/0:25,0:25:75.24:0,75,1087	0/0:27,0:26:78.26:0,78,1169	0/1:4,16:20:99:527,0,123	0/0:14,0:14:42.13:0,42,609	0/0:20,0:20:60.20:0,60,897	0/0:11,0:11:33.11:0,33,494	0/0:20,0:20:60.20:0,60,896	0/0:26,0:26:75.25:0,75,1123	0/0:10,0:10:30.10:0,30,450	0/0:27,0:27:81.27:0,81,1211	0/0:28,0:28:84.28:0,84,1259	0/0:26,0:26:75.22:0,75,1066	0/0:15,0:15:39.13:0,39,583	0/0:56,0:56:99:0,159,2333	0/0:15,0:15:39.13:0,39,580	0/0:8,0:8:18.06:0,18,270	0/0:27,0:27:81.27:0,81,1208	0/0:22,0:22:66.22:0,66,987	0/0:18,0:18:54.18:0,54,808	0/0:29,0:29:87.26:0,87,1244	0/0:12,0:12:36.12:0,36,539
chr10	91760227	.	GC	G	4701.98	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-13.514;DP=530;FS=0.769;HRun=7;HaplotypeScore=92.5461;InbreedingCoeff=0.9984;MQ=77.05;MQ0=5;MQRankSum=-0.814;QD=25.14;ReadPosRankSum=1.641;VQSLOD=5.0772;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:57.36:0,57,396	0/0:9,0:9:20.19:0,20,176	0/0:36,0:25:45.43:0,45,540	0/0:31,0:17:30.03:0,30,323	1/1:0,11:11:33.07:336,33,0	0/0:2,0:13:34.54:0,35,194	0/0:4,0:24:40.08:0,40,204	1/1:1,14:15:42.08:422,42,0	1/1:1,19:19:48.11:490,48,0	0/0:2,0:19:48.89:0,49,256	0/0:2,0:18:46.01:0,46,240	1/1:1,16:17:33.07:336,33,0	0/0:1,0:9:22.76:0,23,116	1/1:1,15:16:42.09:428,42,0	0/0:22,0:22:34.12:0,34,219	0/0:0,0:16:37.34:0,37,189	0/0:21,0:21:44.61:0,45,228	0/0:3,0:21:48.04:0,48,262	1/1:1,14:15:39.07:392,39,0	1/1:0,25:25:63.07:622,63,0	1/1:1,18:19:39.09:398,39,0	0/0:0,0:16:42.87:0,43,222	0/0:0,0:18:45.66:0,46,231	0/0:3,0:23:51.64:0,52,272	0/0:0,0:17:40.11:0,40,203	1/1:0,11:11:33.06:330,33,0	1/1:2,25:27:66.15:673,66,0	1/1:0,11:11:27.06:275,27,0
chr10	91760233	.	CCAAAA	C	2518.58	PASS	AB=0.957;AC=9;AF=0.161;AN=56;BaseQRankSum=-8.862;DP=560;FS=1.183;HRun=0;HaplotypeScore=144.8337;InbreedingCoeff=0.8315;MQ=73.87;MQ0=6;MQRankSum=0.034;QD=24.45;ReadPosRankSum=2.862;VQSLOD=3.3726;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,19:27:51.13:918,51,0	1/1:4,6:10:12.04:226,12,0	0/0:34,0:23:2.99:0,3,367	0/0:39,0:22:24.03:0,24,394	0/0:11,0:11:33.06:0,33,525	0/0:15,0:14:36.12:0,36,883	0/0:22,0:22:36.11:0,36,737	0/0:17,0:17:27.07:0,27,466	0/0:21,0:20:48.16:0,48,882	0/0:20,0:20:39.13:0,39,955	0/0:19,0:19:42.12:0,42,939	0/0:17,0:17:33.11:0,33,635	0/0:8,0:8:18.06:0,18,392	0/0:16,0:16:36.12:0,36,668	1/1:4,17:21:33.11:622,33,0	0/0:17,0:17:42.14:0,42,905	1/1:4,19:23:48.16:904,48,0	0/1:21,1:22:8.37:8,0,989	0/0:16,0:16:27.07:0,27,480	0/0:27,0:27:58.40:0,58,1043	0/0:18,0:18:36.12:0,36,626	0/0:18,0:18:41.98:0,42,943	0/0:20,0:20:48.13:0,48,1070	0/0:23,0:23:54.17:0,54,1225	0/0:19,0:19:45.14:0,45,998	0/0:18,0:18:42.13:0,42,898	0/0:30,0:30:54.18:0,54,1101	0/0:12,0:12:30.10:0,30,560
chr10	91760430	.	A	AGTCT	10688.27	PASS	AB=0.939;AC=23;AF=0.411;AN=56;BaseQRankSum=-6.727;DP=606;FS=0.000;HRun=0;HaplotypeScore=138.8342;InbreedingCoeff=0.9162;MQ=73.90;MQ0=1;MQRankSum=-4.440;QD=41.91;ReadPosRankSum=1.954;VQSLOD=5.0926;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,114,1877	0/0:5,0:5:9.03:0,9,149	0/0:25,0:24:23.05:0,23,349	0/0:22,0:20:24.08:0,24,384	0/0:12,0:12:24.08:0,24,396	1/1:5,20:24:69.24:1637,69,0	1/1:10,16:26:51.18:1249,51,0	0/0:34,0:34:48.15:0,48,747	0/0:21,0:21:51.17:0,51,842	1/1:7,9:16:39.12:877,39,0	1/1:14,10:24:33.11:807,33,0	0/0:18,0:18:33.10:0,33,521	1/1:6,10:16:36.12:875,36,0	0/0:16,0:17:36.12:0,36,569	0/0:16,0:16:27.08:0,27,421	1/1:8,10:18:33.11:808,33,0	0/0:25,0:25:39.13:0,39,643	1/1:11,9:20:21.07:515,21,0	0/0:27,0:27:42.14:0,42,690	0/0:24,0:24:66.23:0,66,1089	0/0:27,0:28:72.22:0,72,1147	1/1:6,15:21:45.15:1099,45,0	1/1:5,12:17:36.11:830,36,0	1/1:5,16:20:48.16:1177,48,0	1/1:9,11:19:30.10:735,30,0	0/1:29,2:31:77.76:78,0,947	0/0:15,0:15:36.11:0,36,564	0/0:13,0:13:39.13:0,39,638
chr10	91760500	.	C	CTT	30830.90	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.486;DP=619;FS=0.000;HRun=0;HaplotypeScore=110.3660;InbreedingCoeff=0.9627;MQ=86.39;MQ0=3;MQRankSum=-11.174;QD=54.38;ReadPosRankSum=5.713;VQSLOD=5.1759;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,53:56:99:2739,141,0	1/1:0,5:5:15.05:305,15,0	0/0:24,0:24:68.89:0,69,1041	0/0:26,1:26:9.64:0,10,939	1/1:0,18:19:51.13:995,51,0	1/1:0,25:25:75.26:1524,75,0	1/1:2,33:35:96.24:1862,96,0	1/1:2,22:24:63.20:1244,63,0	1/1:2,20:20:54.19:1094,54,0	1/1:2,28:30:87.30:1757,87,0	1/1:0,27:27:78.27:1558,78,0	1/1:0,17:18:48.16:975,48,0	1/1:0,23:24:60.21:1211,60,0	1/1:0,17:18:48.16:975,48,0	1/1:2,15:17:39.09:752,39,0	1/1:1,22:23:63.22:1280,63,0	1/1:0,17:17:45.15:914,45,0	1/1:0,7:8:21.07:427,21,0	1/1:0,15:15:45.15:893,45,0	1/1:0,24:25:66.23:1341,66,0	1/1:0,29:29:81.28:1646,81,0	1/1:0,19:19:57.20:1157,57,0	1/1:0,15:15:42.14:852,42,0	1/1:0,17:17:45.08:910,45,0	1/1:1,11:12:33.07:629,33,0	1/1:0,25:27:78.23:1510,78,0	1/1:2,22:25:69.23:1369,69,0	1/1:0,15:15:45.15:914,45,0
chr10	91760948	.	G	GTCTCTCTCTCTC	9536.28	PASS	AB=0.920;AC=53;AF=0.946;AN=56;BaseQRankSum=-3.329;DP=780;FS=5.971;HRun=0;HaplotypeScore=225.1431;InbreedingCoeff=0.1079;MQ=63.69;MQ0=30;MQRankSum=0.948;QD=12.23;ReadPosRankSum=2.225;VQSLOD=3.2930;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,1:30:2.95:131,3,0	1/1:6,0:5:3.01:86,3,0	0/1:85,0:31:28.11:36,0,28	0/1:100,0:31:3.97:4,0,46	1/1:30,0:27:21.53:556,22,0	1/1:16,0:16:15.05:489,15,0	1/1:23,0:23:2.83:35,3,0	1/1:44,0:40:31.31:839,31,0	1/1:12,1:26:6.49:174,6,0	1/1:13,0:13:15.01:269,15,0	1/1:15,0:15:2.99:110,3,0	1/1:12,10:28:3.01:157,3,0	1/1:17,0:18:27.09:551,27,0	1/1:13,0:22:6.02:273,6,0	1/1:18,1:23:6.02:274,6,0	1/1:20,0:19:30.10:1067,30,0	1/1:12,0:15:7.44:387,7,0	1/1:20,0:19:9.50:190,10,0	1/1:27,0:27:44.49:1305,44,0	0/1:26,11:35:0:1,0,0	1/1:24,0:22:9.02:176,9,0	1/1:19,0:18:0.94:2,1,0	1/1:17,0:17:11.84:196,12,0	1/1:26,0:27:3.01:66,3,0	1/1:13,0:12:6:90,6,0	1/1:36,0:32:51.16:1502,51,0	1/1:13,8:21:10.28:390,10,0	1/1:11,0:9:13.58:181,14,0
chr10	91760970	.	C	CTCTCTCTA	6328.82	PASS	AB=0.921;AC=31;AF=0.554;AN=56;BaseQRankSum=4.630;DP=903;FS=28.721;HRun=0;HaplotypeScore=191.3063;InbreedingCoeff=-0.2615;MQ=61.70;MQ0=50;MQRankSum=-4.462;QD=9.25;ReadPosRankSum=4.719;VQSLOD=2.0678;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:22:37.32:37,0,144	0/0:6,0:5:5.75:0,6,43	0/1:121,0:38:2.89:3,0,291	0/0:162,0:44:18.75:0,19,376	0/1:31,0:27:99:303,0,131	0/1:3,1:26:6.87:526,0,7	0/1:7,1:30:39.03:43,0,39	0/1:36,0:32:95.79:96,0,407	0/1:29,0:28:97.68:98,0,152	1/1:2,11:16:33.83:759,34,0	1/1:3,14:18:2.82:107,3,0	0/1:28,0:27:2.77:3,0,60	1/1:3,19:25:30.03:1034,30,0	0/1:23,0:22:80.64:81,0,122	0/1:25,0:25:65.81:66,0,118	1/1:2,2:27:26.60:993,27,0	0/1:16,0:14:30.93:124,0,31	1/1:10,13:22:18.93:537,19,0	0/1:26,0:24:99:233,0,275	0/0:26,0:23:8.94:0,9,68	0/1:25,0:23:91.38:91,0,140	0/0:5,18:24:0:0,0,1	1/1:1,15:19:12.35:338,12,0	0/1:7,21:29:17.93:123,0,18	1/1:4,2:20:5.91:175,6,0	0/1:29,0:25:99:417,0,129	0/1:20,0:19:70.86:71,0,95	0/1:14,0:12:72.93:73,0,92
chr10	91761331	.	CAAA	C	4278.28	PASS	AB=0.655;AC=28;AF=0.500;AN=56;BaseQRankSum=6.033;DP=539;FS=24.118;HRun=16;HaplotypeScore=108.4259;InbreedingCoeff=0.8103;MQ=66.66;MQ0=2;MQRankSum=3.021;QD=14.80;ReadPosRankSum=8.275;VQSLOD=1.3536;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,24:39:41.63:488,42,0	1/1:2,5:7:11.95:129,12,0	0/0:20,0:14:9:0,9,94	0/0:15,0:12:3.20:0,3,162	1/1:8,13:22:32.79:355,33,0	0/0:24,0:28:78.15:0,78,1132	0/0:20,0:22:40.32:0,40,579	0/1:13,9:23:14.92:244,0,15	1/1:5,5:10:8.81:97,9,0	0/0:20,0:24:53.21:0,53,792	0/0:12,0:19:54.06:0,54,699	1/1:3,10:14:27.54:304,28,0	0/0:12,0:12:33.11:0,33,440	1/1:3,8:11:24.01:258,24,0	1/1:6,18:25:27.03:478,27,0	0/0:13,0:14:26.45:0,26,370	1/1:7,13:20:17.78:194,18,0	0/0:1,0:11:21.07:0,21,296	1/1:9,4:13:17.80:188,18,0	1/1:9,15:30:33.14:366,33,0	1/1:9,21:31:38.49:460,38,0	0/0:12,0:21:51.15:0,51,719	0/0:13,0:21:51.09:0,51,720	0/0:16,0:22:58.02:0,58,776	0/0:13,0:18:48.07:0,48,614	0/1:7,11:19:40.05:313,0,40	1/1:6,9:15:18.12:193,18,0	1/1:2,6:9:20.88:211,21,0
chr10	91761394	.	AGGTCTGCTTAGCTTG	A	16182.70	PASS	AB=0.897;AC=23;AF=0.411;AN=56;BaseQRankSum=12.475;DP=549;FS=10.133;HRun=0;HaplotypeScore=248.6121;InbreedingCoeff=0.9159;MQ=93.05;MQ0=1;MQRankSum=-14.667;QD=87.00;ReadPosRankSum=4.425;VQSLOD=3.1739;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.27:0,84,5471	0/0:14,0:13:36.12:0,36,2494	0/0:31,0:31:93.32:0,93,5595	0/0:23,0:23:69.21:0,69,3877	0/0:27,0:27:75.26:0,75,4980	1/1:3,17:20:48.16:2088,48,0	1/1:3,14:17:36.12:1542,36,0	0/0:25,0:25:75.26:0,75,5119	0/0:20,0:20:57.18:0,57,4036	1/1:5,16:21:45.15:1929,45,0	1/1:2,20:22:60.21:2637,60,0	0/0:19,0:19:54.19:0,54,3670	1/1:2,12:14:30.10:1367,30,0	0/0:14,0:14:36.12:0,36,2686	0/0:20,0:20:57.20:0,57,3974	1/1:0,11:11:30.10:1367,30,0	0/0:27,0:27:66.23:0,66,4746	1/1:0,9:9:24.08:1094,24,0	0/0:20,0:19:57.20:0,57,3434	0/0:24,0:24:72.25:0,72,5332	0/0:38,0:38:99:0,108,7896	1/1:4,13:17:36.08:1343,36,0	1/1:2,5:7:9.03:411,9,0	1/1:2,12:14:29.89:1249,30,0	1/1:2,6:8:18.06:820,18,0	0/1:23,3:26:99:335,0,4549	0/0:22,0:22:63.22:0,63,4402	0/0:9,0:9:24.08:0,24,1809
chr10	91761686	.	TGATAGATA	T	2429.49	PASS	AB=0.750;AC=20;AF=0.385;AN=52;BaseQRankSum=-5.721;DP=641;FS=31.415;HRun=0;HaplotypeScore=191.4977;InbreedingCoeff=0.7018;MQ=66.56;MQ0=2;MQRankSum=-4.464;QD=11.41;ReadPosRankSum=1.152;VQSLOD=1.4102;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:30:16.07:0,16,755	0/0:8,0:14:15.05:0,15,465	./.	./.	0/0:20,0:20:3.01:0,3,39	1/1:13,8:20:12.04:285,12,0	1/1:10,10:20:6.02:148,6,0	0/0:42,0:42:31.64:0,32,292	0/0:31,0:32:15.05:0,15,317	1/1:18,10:28:24.08:562,24,0	1/1:7,7:14:8.79:223,9,0	0/0:28,0:29:30.10:0,30,802	1/1:5,6:11:6.02:136,6,0	0/0:18,0:18:6.02:0,6,100	0/0:21,0:36:36.12:0,36,962	0/1:16,8:24:18.99:165,0,19	0/0:23,0:37:44.51:0,45,1281	1/1:10,0:10:6.02:123,6,0	0/0:8,0:10:9.01:0,9,162	0/0:27,0:27:12.04:0,12,246	0/0:19,0:20:5.91:0,6,171	1/1:11,17:28:15.05:373,15,0	1/1:11,9:20:12.04:298,12,0	0/1:10,5:15:0:0,0,0	1/1:13,9:22:12.04:298,12,0	0/0:29,0:29:23.90:0,24,473	0/0:21,0:21:8.86:0,9,136	0/0:13,0:13:3.01:0,3,60
chr10	91761698	.	A	AGAT	3205.48	PASS	AB=0.977;AC=17;AF=0.304;AN=56;BaseQRankSum=5.250;DP=597;FS=22.021;HRun=0;HaplotypeScore=139.2339;InbreedingCoeff=-0.4334;MQ=62.22;MQ0=3;MQRankSum=-0.064;QD=7.97;ReadPosRankSum=3.005;VQSLOD=1.3780;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:53.48:53,0,546	0/1:13,0:13:76.63:77,0,242	0/1:24,0:16:20.37:20,0,379	0/0:19,0:13:26.55:0,27,316	0/1:20,0:20:11.15:11,0,40	0/0:19,0:18:33.07:0,33,425	0/0:15,0:15:14.77:0,15,175	0/1:35,0:35:99:939,0,156	0/1:34,0:34:99:169,0,118	0/0:24,0:24:21.04:0,21,665	0/0:12,0:12:18.03:0,18,217	0/1:23,0:23:99:488,0,235	0/0:11,0:11:18.04:0,18,236	0/1:17,0:17:26.81:27,0,37	0/1:33,0:33:84.29:84,0,669	0/1:22,0:22:23.91:24,0,343	0/1:34,0:34:99:140,0,634	0/0:10,0:10:21.91:0,22,274	0/1:5,6:10:30.39:303,0,30	0/1:30,0:30:99:110,0,114	0/1:19,0:18:27.91:226,0,28	0/0:26,0:26:30.05:0,30,357	0/0:21,0:20:36.07:0,36,451	0/0:14,0:14:11.56:0,12,163	0/0:24,0:24:48.08:0,48,626	0/1:24,1:25:99:537,0,168	0/1:22,0:22:99:148,0,119	0/1:13,0:13:8.70:9,0,83
chr10	91761701	.	TA	T	1951.57	PASS	AB=0.877;AC=10;AF=0.179;AN=56;BaseQRankSum=2.704;DP=586;FS=9.288;HRun=1;HaplotypeScore=130.0239;InbreedingCoeff=-0.2331;MQ=58.73;MQ0=3;MQRankSum=-2.512;QD=8.45;ReadPosRankSum=1.634;VQSLOD=0.5014;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:51.44:0,51,748	0/0:12,0:12:33.09:0,33,423	0/1:19,0:13:17.71:18,0,416	0/0:18,0:13:30.76:0,31,361	0/0:20,0:20:3.06:0,3,44	0/0:20,0:19:26.88:0,27,376	0/0:17,0:17:17.85:0,18,234	0/1:9,26:35:99:930,0,292	0/1:30,1:32:8.21:8,0,209	0/0:24,0:24:43.48:0,43,585	0/0:14,0:14:15.03:0,15,189	0/1:8,14:22:99:418,0,273	0/0:12,0:12:17.84:0,18,223	0/0:16,0:16:9.30:0,9,97	0/0:32,0:32:72.21:0,72,991	0/1:20,0:20:32:32,0,287	0/0:34,0:34:80.70:0,81,1020	0/0:11,0:11:21.07:0,21,301	0/1:11,0:10:99:202,0,112	0/1:30,0:30:14.71:15,0,230	0/1:7,12:18:66.94:147,0,67	0/0:27,0:27:18.05:0,18,251	0/0:23,0:22:27.08:0,27,390	0/0:14,0:14:8.32:0,8,135	0/0:24,0:24:36.12:0,36,543	0/1:20,0:20:99:291,0,144	0/1:22,0:22:31.73:32,0,140	0/0:13,0:13:9.03:0,9,126
chr10	91761817	.	G	GAT	668.60	PASS	AB=1.000;AC=15;AF=0.288;AN=52;BaseQRankSum=5.045;DP=349;FS=33.951;HRun=0;HaplotypeScore=41.5066;InbreedingCoeff=0.7113;MQ=56.35;MQ0=12;MQRankSum=1.263;QD=23.06;ReadPosRankSum=-5.713;VQSLOD=0.5806;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.22:0,69,1124	0/0:10,0:10:30.10:0,30,489	0/0:16,0:8:21.07:0,21,340	0/0:9,0:9:27.09:0,27,440	0/0:20,0:20:57.19:0,57,925	1/1:3,0:2:3.01:48,3,0	0/1:4,0:2:10.78:19,0,11	0/0:23,0:23:69.15:0,69,1054	0/0:18,0:18:48.15:0,48,760	1/1:3,4:6:18.06:318,18,0	1/1:0,2:2:3.01:57,3,0	0/0:17,0:17:48.16:0,48,781	1/1:1,1:2:6.02:107,6,0	0/0:9,0:9:27.09:0,27,440	0/0:26,0:26:72.20:0,72,1146	0/0:2,0:2:3.01:0,3,49	0/0:24,0:24:63.22:0,63,1028	./.	0/0:21,0:21:60.20:0,60,977	0/0:24,0:24:65.90:0,66,1075	0/0:25,0:22:63.22:0,63,1023	./.	1/1:0,5:5:2.99:58,3,0	1/1:0,2:2:3.01:58,3,0	1/1:2,2:3:9.03:165,9,0	0/0:16,0:14:42.14:0,42,685	0/0:16,0:15:45.15:0,45,734	0/0:12,0:11:33.11:0,33,537
chr10	91761917	.	G	GA	156.40	PASS	AB=1.000;AC=11;AF=0.239;AN=46;BaseQRankSum=4.517;DP=270;FS=1.443;HRun=2;HaplotypeScore=40.7167;InbreedingCoeff=0.6489;MQ=68.41;MQ0=6;MQRankSum=3.011;QD=12.03;ReadPosRankSum=-4.570;VQSLOD=0.3958;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:75.16:0,75,1046	0/0:7,0:7:15.05:0,15,209	0/0:21,0:10:14.30:0,14,235	0/0:17,0:10:19.23:0,19,319	0/0:16,0:16:36.12:0,36,503	./.	0/1:2,0:2:14.60:35,0,15	0/0:25,0:24:50.65:0,51,665	0/0:14,0:14:21.07:0,21,292	1/1:0,2:2:6.01:69,6,0	1/1:0,1:1:3.01:45,3,0	0/0:10,0:10:26.30:0,26,340	./.	0/0:7,0:7:15.02:0,15,189	0/0:8,0:8:21.07:0,21,293	./.	0/0:20,0:20:39.13:0,39,545	1/1:2,0:1:1.25:3,1,0	0/0:18,0:18:47.83:0,48,629	0/0:16,0:16:36.07:0,36,480	0/0:7,0:7:18.06:0,18,251	1/1:2,2:4:3.01:44,3,0	1/1:0,2:2:6.02:89,6,0	./.	./.	0/0:15,0:15:35.70:0,36,458	0/0:12,0:12:18.06:0,18,251	0/0:4,0:3:9.03:0,9,113
chr10	91762356	.	G	GGCGCCACT	53437.44	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.054;DP=649;FS=6.450;HRun=0;HaplotypeScore=147.8728;InbreedingCoeff=0.9491;MQ=75.88;MQ0=0;MQRankSum=-10.108;QD=88.62;ReadPosRankSum=3.491;VQSLOD=5.4280;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,34:51:99:4330,108,0	1/1:4,7:12:24.08:988,24,0	0/0:25,0:25:66.21:0,66,1676	0/0:21,0:21:44.79:0,45,1030	1/1:11,16:28:45.15:1902,45,0	1/1:0,16:19:48.16:1967,48,0	1/1:13,17:34:84.29:3539,84,0	1/1:26,11:38:99:4036,108,0	1/1:4,18:24:60.20:2510,60,0	1/1:12,13:27:78.27:3059,78,0	1/1:6,4:10:15.05:666,15,0	1/1:13,18:32:87.30:3399,87,0	1/1:5,15:21:54.19:2313,54,0	1/1:8,18:26:60.20:2485,60,0	1/1:5,18:24:57.20:2504,57,0	1/1:8,12:22:54.19:2045,54,0	1/1:3,16:26:48.16:2014,48,0	1/1:5,0:6:8.99:259,9,0	1/1:10,9:19:57.20:2222,57,0	1/1:7,9:18:33.11:1278,33,0	1/1:8,14:26:42.14:1733,42,0	1/1:8,13:24:33.11:1386,33,0	1/1:10,12:24:18.06:800,18,0	1/1:4,9:14:15.05:653,15,0	1/1:3,9:13:33.11:1414,33,0	1/1:11,16:28:78.27:3070,78,0	1/1:9,12:21:45.15:1926,45,0	1/1:3,7:15:24.08:945,24,0
chr10	91762635	.	CTTCT	C	1976.09	PASS	AB=0.912;AC=19;AF=0.352;AN=54;BaseQRankSum=5.047;DP=527;FS=23.182;HRun=0;HaplotypeScore=167.3181;InbreedingCoeff=0.2398;MQ=44.19;MQ0=18;MQRankSum=-4.590;QD=6.27;ReadPosRankSum=-1.103;VQSLOD=0.8880;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,8:36:99:315,0,1399	0/0:12,0:12:36.10:0,36,682	./.	0/0:3,0:1:3.01:0,3,45	0/0:20,0:19:41.93:0,42,521	1/1:15,0:15:24.61:135,25,0	1/1:41,0:38:51.30:370,51,0	0/0:20,0:12:23.89:0,24,345	0/0:26,0:26:60.11:0,60,865	0/1:31,0:30:60.05:60,0,372	0/1:16,0:14:23.06:23,0,206	0/0:18,0:18:39.11:0,39,583	0/1:10,8:17:12.82:417,0,13	0/0:19,0:19:45.12:0,45,692	0/1:15,5:18:99:104,0,810	1/1:17,0:17:13.93:66,14,0	0/1:21,3:23:99:117,0,728	0/1:21,0:20:99:107,0,216	0/0:18,0:14:39.58:0,40,637	0/0:19,0:18:45.08:0,45,724	0/0:16,0:16:37.63:0,38,480	1/1:1,14:15:13.31:241,13,0	1/1:5,0:19:13.73:100,14,0	0/1:17,0:16:37.29:51,0,37	0/1:22,0:22:54.38:54,0,302	0/0:17,0:17:48.13:0,48,740	0/0:14,0:14:29.68:0,30,486	0/0:9,0:8:21.05:0,21,290
chr10	91762643	.	CTTCT	C	2826.18	PASS	AB=0.961;AC=21;AF=0.375;AN=56;BaseQRankSum=2.647;DP=525;FS=26.622;HRun=0;HaplotypeScore=158.0588;InbreedingCoeff=0.1775;MQ=42.68;MQ0=16;MQRankSum=-3.726;QD=8.41;ReadPosRankSum=-2.490;VQSLOD=0.9255;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:35:99:306,0,1246	0/0:11,0:11:13.19:0,13,568	0/0:7,0:1:3.01:0,3,51	0/0:13,0:5:15.05:0,15,246	0/0:20,0:19:25.81:0,26,395	1/1:8,7:14:27.47:406,27,0	1/1:27,9:33:54.76:636,55,0	0/0:18,0:11:30.08:0,30,314	0/0:23,0:23:54.49:0,54,603	0/1:32,0:31:67.72:68,0,356	0/1:15,0:13:16.52:17,0,202	0/0:19,0:19:36.01:0,36,361	0/1:22,0:21:16.41:402,0,16	0/0:18,0:18:42.52:0,43,486	0/1:20,0:18:99:113,0,699	1/1:1,15:16:15.05:259,15,0	0/1:20,0:19:99:124,0,587	0/1:21,0:20:66.52:67,0,282	0/0:17,0:13:35.21:0,35,389	0/1:21,0:20:5.97:6,0,474	0/0:15,0:15:17.18:0,17,334	1/1:17,0:17:21.71:257,22,0	1/1:16,0:16:11.96:120,12,0	0/1:4,13:16:7.67:176,0,8	0/1:21,0:21:52.17:52,0,293	0/0:14,0:14:42.11:0,42,513	0/0:14,0:14:22.69:0,23,298	0/1:10,0:10:2.37:2,0,154
chr10	91762651	.	CTTCT	C	3814.21	PASS	AB=0.990;AC=30;AF=0.536;AN=56;BaseQRankSum=-0.285;DP=551;FS=15.715;HRun=0;HaplotypeScore=161.4224;InbreedingCoeff=-0.3430;MQ=41.79;MQ0=17;MQRankSum=0.220;QD=7.78;ReadPosRankSum=-5.517;VQSLOD=-0.2460;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:34:99:313,0,1003	0/0:10,0:10:2.15:0,2,287	0/0:11,0:1:3.01:0,3,60	0/0:21,0:7:21.07:0,21,386	0/1:20,0:19:66.17:66,0,192	1/1:14,0:13:27:406,27,0	1/1:37,0:34:47.71:578,48,0	0/0:19,0:14:9.57:0,10,108	0/1:25,1:26:99:205,0,259	0/1:33,0:32:3.18:3,0,368	0/1:17,0:15:40.15:40,0,201	0/1:19,0:19:99:125,0,106	0/1:19,0:18:3.48:380,0,3	0/1:17,0:17:15.61:16,0,259	0/1:21,0:19:99:136,0,450	1/1:14,0:14:15.05:260,15,0	0/1:20,0:19:99:136,0,400	0/1:25,0:24:99:123,0,230	0/1:19,0:15:99:125,0,101	0/1:19,0:18:34.47:34,0,340	0/1:20,2:22:99:109,0,165	1/1:20,0:20:20.25:251,20,0	1/1:15,0:15:11.96:122,12,0	1/1:20,0:19:1.32:192,1,0	0/1:20,0:20:75.45:75,0,288	0/1:14,1:15:29.56:30,0,274	0/1:14,0:14:27.98:28,0,157	0/1:8,0:8:60.73:61,0,73
chr10	91762659	.	CTTCT	C	4071.68	PASS	AB=0.983;AC=32;AF=0.571;AN=56;BaseQRankSum=-2.329;DP=552;FS=9.972;HRun=0;HaplotypeScore=156.6073;InbreedingCoeff=-0.3289;MQ=41.34;MQ0=16;MQRankSum=-0.318;QD=8.40;ReadPosRankSum=-6.441;VQSLOD=-0.4069;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:36:99:418,0,292	0/1:9,0:9:46.19:46,0,57	0/0:16,0:4:11.98:0,12,150	0/0:25,0:8:20.90:0,21,314	0/1:19,0:18:43.54:44,0,201	1/1:13,0:12:26.93:405,27,0	1/1:32,0:29:42.33:519,42,0	0/1:20,0:16:52.01:96,0,52	0/1:26,0:26:99:160,0,254	0/0:25,0:24:12.74:0,13,376	0/1:16,0:14:26.17:26,0,204	0/1:17,1:18:93.21:93,0,106	1/1:19,0:18:33.24:416,33,0	0/1:17,1:18:35.86:36,0,240	0/1:20,0:18:99:162,0,124	1/1:16,0:16:12.59:256,13,0	0/1:21,0:20:99:144,0,142	0/1:22,0:21:99:121,0,186	0/1:18,1:16:60.11:122,0,60	0/1:20,0:19:34.74:35,0,342	0/1:22,2:24:99:156,0,116	1/1:20,0:20:17.36:235,17,0	1/1:17,0:17:14.90:148,15,0	1/1:23,0:22:20.17:246,20,0	0/1:18,0:18:76.82:77,0,290	0/1:15,0:15:25.95:26,0,295	0/1:13,0:14:52.28:52,0,154	0/1:8,0:8:32.72:33,0,84
chr10	91762690	.	C	CTT	4627.82	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-0.633;DP=521;FS=0.871;HRun=10;HaplotypeScore=131.6417;InbreedingCoeff=0.9782;MQ=54.32;MQ0=4;MQRankSum=2.599;QD=26.00;ReadPosRankSum=-0.321;VQSLOD=3.8083;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:35:68.76:0,69,672	0/0:6,0:6:18.04:0,18,183	0/0:23,0:11:15.21:0,15,135	0/0:24,0:9:13.02:0,13,89	1/1:4,9:14:24.38:259,24,0	0/0:16,0:16:32.99:0,33,335	0/0:22,0:23:44.46:0,44,425	1/1:4,13:18:38.99:488,39,0	1/1:2,19:22:42.14:610,42,0	0/0:29,0:29:36.78:0,37,579	0/0:16,0:16:30.04:0,30,305	1/1:3,12:16:35.61:501,36,0	0/0:14,0:14:30.03:0,30,304	1/1:4,11:15:24.08:358,24,0	0/0:12,0:11:24.02:0,24,244	0/0:15,0:15:27.01:0,27,274	0/0:21,0:21:27.94:0,28,430	0/0:27,0:27:66.11:0,66,671	1/1:5,3:7:9:110,9,0	1/1:9,17:26:50.97:636,51,0	1/1:3,20:24:51.17:744,51,0	0/0:20,0:21:34.59:0,35,388	0/0:13,0:14:14.77:0,15,134	0/0:25,0:25:48.01:0,48,479	0/0:19,0:19:44.92:0,45,425	1/1:5,9:14:28.28:341,28,0	1/1:3,8:12:15.05:223,15,0	1/1:0,8:8:24.08:357,24,0
chr10	91764778	.	C	CTT	7696.49	PASS	AB=0.987;AC=42;AF=0.750;AN=56;BaseQRankSum=-6.979;DP=573;FS=40.455;HRun=1;HaplotypeScore=106.8003;InbreedingCoeff=-0.0636;MQ=41.11;MQ0=39;MQRankSum=3.130;QD=14.72;ReadPosRankSum=3.664;VQSLOD=-0.0376;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:7:10.19:71,0,10	1/1:9,0:5:8.77:80,9,0	0/0:50,0:10:19.26:0,19,155	0/1:78,0:14:0.12:0,0,59	1/1:25,2:26:37.87:859,38,0	0/1:10,0:12:13.18:70,0,13	1/1:21,0:20:13.07:95,13,0	0/1:27,6:32:2.72:702,0,3	1/1:19,2:20:27.82:576,28,0	0/1:20,0:15:77.13:77,0,96	1/1:23,0:21:20.85:187,21,0	1/1:15,1:15:29.80:509,30,0	0/1:11,0:11:52.80:84,0,53	1/1:21,1:22:49.89:700,50,0	0/1:18,0:13:6.28:142,0,6	1/1:12,0:12:7.22:80,7,0	0/1:31,0:24:22.82:236,0,23	1/1:6,0:6:10.52:63,11,0	1/1:15,0:14:12:414,12,0	1/1:16,2:17:28.82:405,29,0	1/1:20,0:19:38.07:493,38,0	0/1:9,0:8:20.86:64,0,21	1/1:11,0:10:18.76:114,19,0	0/1:13,0:11:17.43:76,0,17	0/1:9,0:10:37.12:60,0,37	0/1:28,0:25:30.26:581,0,30	1/1:16,2:17:47.30:706,47,0	1/1:10,1:9:20.57:253,21,0
chr10	91764823	.	T	TTC	4471.90	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=1.227;DP=446;FS=24.028;HRun=0;HaplotypeScore=102.3945;InbreedingCoeff=0.7102;MQ=53.80;MQ0=40;MQRankSum=0.078;QD=16.03;ReadPosRankSum=-0.365;VQSLOD=2.6042;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,1:8:12.04:165,12,0	1/1:3,2:4:6.02:92,6,0	0/0:15,0:5:5.99:0,6,60	0/0:39,1:19:29:0,29,271	1/1:18,2:19:35.73:441,36,0	0/0:13,0:12:17.98:0,18,181	0/0:13,0:14:16.22:0,16,178	1/1:30,1:31:48.08:649,48,0	0/1:13,0:13:22.54:107,0,23	0/0:21,0:17:33.04:0,33,366	0/0:10,0:8:8.21:0,8,79	1/1:16,1:15:0.79:247,1,0	0/0:10,0:10:20.98:0,21,214	1/1:11,2:12:9.03:115,9,0	1/1:18,5:17:30.57:441,31,0	0/0:11,0:8:15.01:0,15,165	1/1:26,6:26:35.93:431,36,0	0/1:7,0:6:22.35:22,0,80	1/1:10,2:10:15.02:186,15,0	1/1:16,4:18:8.48:485,8,0	1/1:14,0:12:8.97:119,9,0	0/0:9,0:8:14.51:0,15,156	0/1:9,0:5:0:0,0,0	0/0:14,0:10:12.04:0,12,146	0/0:10,0:9:10.27:0,10,112	1/1:19,1:19:23.58:326,24,0	1/1:13,0:12:21.78:263,22,0	1/1:18,0:15:27.09:383,27,0
chr10	91764913	.	C	CAA	7731	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-1.950;DP=432;FS=9.785;HRun=9;HaplotypeScore=105.3900;InbreedingCoeff=0.3186;MQ=72.79;MQ0=0;MQRankSum=5.845;QD=19.38;ReadPosRankSum=2.086;VQSLOD=2.8717;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:16:37.15:126,37,0	1/1:0,0:7:17.47:60,17,0	0/0:11,0:13:17.54:0,18,146	0/0:7,0:7:5.24:0,5,40	1/1:1,24:25:69.19:1022,69,0	0/1:8,0:8:14.31:14,0,113	0/0:6,0:6:9.01:0,9,96	1/1:6,15:22:45.13:667,45,0	1/1:2,16:19:44.64:654,45,0	0/1:20,0:20:57.78:58,0,272	0/1:34,0:34:99:215,0,400	1/1:3,8:11:18.06:277,18,0	0/0:3,0:3:6.01:0,6,64	1/1:1,17:20:46.16:623,46,0	1/1:1,0:16:34.93:120,35,0	0/1:11,0:11:14.32:14,0,197	1/1:4,0:37:69.87:239,70,0	1/1:4,0:4:5.38:39,5,0	1/1:3,4:7:15.05:225,15,0	1/1:4,15:22:47.57:625,48,0	1/1:1,9:10:24.08:370,24,0	0/1:11,0:11:76.55:77,0,164	0/1:24,0:24:99:128,0,300	0/0:4,0:4:6.49:0,6,65	0/1:11,0:11:74.79:97,0,75	1/1:3,14:19:47.13:660,47,0	1/1:4,20:27:47.65:698,48,0	1/1:0,17:18:48.16:721,48,0
chr10	91765250	.	TA	T	8043.68	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=18.230;DP=602;FS=7.314;HRun=1;HaplotypeScore=79.8107;InbreedingCoeff=0.9990;MQ=72.33;MQ0=0;MQRankSum=-1.231;QD=35.43;ReadPosRankSum=4.940;VQSLOD=4.8760;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,128,1781	0/0:12,0:12:36.12:0,36,510	0/0:21,0:19:47.91:0,48,632	0/0:8,0:8:20.77:0,21,253	0/0:32,0:32:96.11:0,96,1289	1/1:0,21:21:48.16:660,48,0	1/1:0,15:14:39.13:543,39,0	0/0:29,0:29:87.26:0,87,1207	0/0:16,0:16:48.14:0,48,667	1/1:3,28:31:87.19:1131,87,0	1/1:0,14:14:39.13:536,39,0	0/0:16,0:16:48.15:0,48,685	1/1:0,19:19:41.97:583,42,0	0/0:25,0:25:72.21:0,72,1013	0/0:23,0:23:69.22:0,69,990	1/1:0,21:21:60.20:828,60,0	0/0:26,0:26:78.22:0,78,1085	1/1:1,27:28:31.42:951,31,0	0/0:24,0:24:71.97:0,72,976	0/0:23,0:23:69.16:0,69,970	0/0:18,0:18:51.13:0,51,703	1/1:0,23:23:60.08:767,60,0	1/1:1,18:19:51.17:708,51,0	1/1:0,22:22:60.20:835,60,0	1/1:0,14:14:36.12:499,36,0	0/0:17,0:17:51.16:0,51,723	0/0:30,0:30:90.25:0,90,1245	0/0:10,0:10:24.07:0,24,321
chr10	91766566	.	C	CAT	3610.53	PASS	AB=0.859;AC=30;AF=0.536;AN=56;BaseQRankSum=2.083;DP=391;FS=1.052;HRun=0;HaplotypeScore=89.6348;InbreedingCoeff=0.6543;MQ=61.85;MQ0=13;MQRankSum=-1.366;QD=14.68;ReadPosRankSum=-0.198;VQSLOD=3.4303;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,2:23:35.86:348,36,0	1/1:6,3:9:23.61:228,24,0	0/0:18,0:10:20.13:0,20,195	0/0:23,0:6:11.93:0,12,112	1/1:10,0:9:11.82:85,12,0	0/0:12,0:12:29.96:0,30,248	0/0:19,0:17:23.89:0,24,189	1/1:3,20:23:59.72:532,60,0	1/1:10,0:10:10.41:138,10,0	0/0:10,0:10:17.04:0,17,202	0/0:12,0:12:4.25:0,4,113	1/1:6,4:10:3.86:210,4,0	0/0:7,0:7:3.44:0,3,67	1/1:1,6:7:3.01:56,3,0	1/1:9,3:12:33.01:321,33,0	0/1:12,0:12:3.48:3,0,82	1/1:20,0:20:31.69:384,32,0	0/0:9,0:9:18.83:0,19,174	1/1:6,10:15:41.69:416,42,0	0/1:3,7:11:5.16:67,0,5	0/1:24,0:23:2.13:190,0,2	0/1:5,0:6:2.64:3,0,61	0/0:10,0:10:11.56:0,12,123	0/0:14,0:12:1.98:0,2,6	0/0:10,0:11:18.99:0,19,192	1/1:19,1:20:11.55:270,12,0	1/1:1,13:14:14.64:210,15,0	1/1:8,6:13:9.27:150,9,0
chr10	91766615	.	CTTTTTT	C	1825.76	PASS	AB=0.712;AC=22;AF=0.393;AN=56;BaseQRankSum=3.047;DP=522;FS=2.482;HRun=17;HaplotypeScore=127.6156;InbreedingCoeff=0.3377;MQ=38.87;MQ0=26;MQRankSum=1.653;QD=10.32;ReadPosRankSum=3.744;VQSLOD=-0.3219;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,1:8:4.13:15,4,0	0/1:4,0:5:6.21:6,0,44	0/0:68,0:14:18.99:0,19,298	0/0:93,0:17:20.69:0,21,256	0/0:16,0:17:39.13:0,39,790	1/1:5,1:7:7.26:76,7,0	1/1:11,10:18:32.53:432,33,0	0/0:16,0:16:32.39:0,32,807	0/0:14,0:14:33.10:0,33,617	0/1:8,8:16:12.59:214,0,13	0/1:8,4:12:55.37:55,0,140	0/0:17,0:16:44.94:0,45,741	1/1:4,4:8:14.28:198,14,0	0/0:16,0:13:30.06:0,30,519	0/1:11,0:16:17.93:49,0,18	0/1:4,4:7:23.38:148,0,23	0/1:4,2:9:8.78:117,0,9	0/1:5,2:7:40.23:96,0,40	0/0:18,0:18:45.14:0,45,1033	0/0:14,0:14:30.09:0,30,668	0/0:9,0:9:6.02:0,6,139	1/1:8,5:11:10.35:228,10,0	0/1:3,4:7:12.90:138,0,13	1/1:9,8:15:8.55:132,9,0	1/1:11,4:13:4.33:108,4,0	0/0:26,0:27:51.15:0,51,1137	0/0:18,0:18:30.91:0,31,716	0/0:14,0:15:27.09:0,27,644
chr10	91766626	.	T	TGG	1082.55	PASS	AB=0.845;AC=12;AF=0.214;AN=56;BaseQRankSum=1.835;DP=496;FS=4.124;HRun=0;HaplotypeScore=114.0125;InbreedingCoeff=-0.1118;MQ=38.77;MQ0=17;MQRankSum=1.315;QD=7.12;ReadPosRankSum=2.846;VQSLOD=3.0083;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:12:9.93:0,10,178	0/0:6,0:6:1.59:0,2,125	0/0:53,0:12:18:0,18,196	0/0:65,0:14:8.49:0,8,174	0/0:18,0:18:46.84:0,47,507	0/1:7,3:10:99:116,0,159	0/1:19,3:20:99:195,0,129	0/0:18,0:17:41.03:0,41,449	0/0:13,0:13:35.89:0,36,412	0/1:13,6:19:73.30:269,0,73	0/1:12,2:14:28.91:29,0,126	0/0:17,0:16:47.34:0,47,542	0/1:10,1:11:40.98:41,0,141	0/0:15,0:12:36.09:0,36,435	0/0:14,0:13:23.14:0,23,210	0/1:9,2:10:51.77:52,0,132	0/0:14,0:13:6.70:0,7,179	1/1:4,3:7:10.74:146,11,0	0/0:21,0:20:54.08:0,54,635	0/0:13,0:13:30.07:0,30,364	0/0:4,0:4:9.03:0,9,117	0/1:13,0:12:62.82:122,0,63	0/1:9,1:10:55.51:56,0,123	0/1:12,6:16:48.67:49,0,67	0/1:11,6:15:85.63:161,0,86	0/0:21,0:21:57.10:0,57,704	0/0:17,0:17:42.03:0,42,509	0/0:16,0:14:26.79:0,27,313
chr10	91768833	.	T	TTTTGTTTG	18297.16	PASS	AB=0.978;AC=32;AF=0.571;AN=56;BaseQRankSum=-8.000;DP=674;FS=9.317;HRun=0;HaplotypeScore=150.6990;InbreedingCoeff=0.8348;MQ=57.61;MQ0=6;MQRankSum=-12.859;QD=45.07;ReadPosRankSum=-1.414;VQSLOD=3.7455;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,17:27:39.13:1533,39,0	1/1:4,4:9:9.03:376,9,0	0/0:40,0:28:33.11:0,33,790	0/0:42,0:25:53.80:0,54,1037	1/1:8,22:33:75.23:2667,75,0	0/0:21,0:21:45.15:0,45,1043	0/0:21,0:21:48.10:0,48,1045	1/1:17,11:28:33.58:965,34,0	1/1:7,16:23:36.12:1498,36,0	0/0:26,0:26:63.19:0,63,1480	0/1:21,1:22:70.97:71,0,1001	1/1:7,9:18:24.07:902,24,0	0/0:25,0:25:63.21:0,63,1484	1/1:4,11:15:27.09:1122,27,0	1/1:9,7:21:18.06:677,18,0	0/0:14,0:14:30.09:0,30,688	1/1:12,10:22:24.08:1003,24,0	0/1:22,0:22:55.17:55,0,1064	1/1:14,10:28:51.17:1415,51,0	1/1:13,21:34:54.18:2209,54,0	1/1:4,13:19:18.06:725,18,0	0/0:24,0:24:54.19:0,54,1309	0/0:19,0:19:42.14:0,42,1038	0/0:23,0:23:57.20:0,57,1421	0/0:13,0:13:24.03:0,24,563	1/1:17,14:36:54.08:1583,54,0	1/1:14,14:29:27.09:1127,27,0	1/1:8,5:14:9.03:370,9,0
chr10	91769234	.	TTGTG	T	2004	PASS	AC=22;AF=0.423;AN=52;BaseQRankSum=-0.848;DP=577;FS=22.694;HRun=0;HaplotypeScore=127.1362;InbreedingCoeff=0.9157;MQ=61.45;MQ0=6;MQRankSum=-0.238;QD=9.15;ReadPosRankSum=1.173;VQSLOD=1.1656;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:27:18.06:0,18,335	0/0:6,0:6:6.02:0,6,100	./.	./.	1/1:5,7:12:14.96:180,15,0	0/0:21,0:20:36.11:0,36,782	0/0:21,0:23:24.27:0,24,445	1/1:26,0:26:5.97:46,6,0	1/1:15,5:20:18.06:277,18,0	0/0:21,0:21:27.08:0,27,527	0/0:18,0:18:23.91:0,24,548	1/1:19,10:29:17.98:227,18,0	0/0:14,0:14:12.34:0,12,215	1/1:14,3:16:20.99:237,21,0	0/0:16,0:21:15.03:0,15,282	0/0:20,0:21:23.79:0,24,413	0/0:20,0:31:27.09:0,27,512	0/0:19,0:18:24.08:0,24,533	1/1:14,3:18:12.03:159,12,0	1/1:13,6:19:8.99:114,9,0	1/1:36,2:38:30.95:355,31,0	0/0:12,0:13:14.79:0,15,266	0/0:14,0:16:23.87:0,24,477	0/0:30,0:31:38.60:0,39,731	0/0:10,0:10:15.03:0,15,287	1/1:9,4:13:12.04:179,12,0	1/1:9,11:21:11.60:315,12,0	1/1:3,2:5:9.02:121,9,0
chr10	91769672	.	CT	C	11253.36	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.214;DP=611;FS=9.037;HRun=10;HaplotypeScore=77.0965;InbreedingCoeff=0.8459;MQ=73.88;MQ0=2;MQRankSum=-3.675;QD=19.44;ReadPosRankSum=3.106;VQSLOD=5.5714;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:36:59.07:173,59,0	1/1:1,0:11:20.37:60,20,0	0/0:16,0:14:4.20:0,4,181	0/0:16,0:15:12.03:0,12,126	1/1:1,28:30:83.01:709,83,0	1/1:3,14:17:41.98:365,42,0	1/1:1,18:19:30.57:419,31,0	1/1:4,32:35:95.97:834,96,0	1/1:1,24:26:71.02:605,71,0	1/1:0,19:19:56.99:495,57,0	1/1:3,13:16:5.80:279,6,0	1/1:2,21:23:53.99:469,54,0	1/1:3,18:21:53.98:469,54,0	1/1:0,10:10:24:208,24,0	1/1:3,0:27:48.88:144,49,0	1/1:2,22:24:65.97:573,66,0	1/1:0,0:24:48.89:144,49,0	1/1:2,19:21:56.99:495,57,0	1/1:5,16:20:47.92:406,48,0	1/1:3,25:28:71.97:625,72,0	1/1:5,23:28:56.96:495,57,0	1/1:2,16:18:47.98:417,48,0	1/1:2,20:23:59.02:501,59,0	1/1:1,23:24:65.99:573,66,0	1/1:2,13:15:35.99:313,36,0	1/1:1,13:14:35.98:312,36,0	1/1:1,26:27:77.98:677,78,0	1/1:0,21:21:56.99:495,57,0
chr10	91770821	.	TTG	T	6244.71	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-3.898;DP=461;FS=8.221;HRun=0;HaplotypeScore=125.5019;InbreedingCoeff=0.4837;MQ=67.43;MQ0=0;MQRankSum=-4.696;QD=16.22;ReadPosRankSum=-2.497;VQSLOD=4.0732;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:87.25:652,87,0	1/1:11,0:11:29.76:220,30,0	0/0:14,0:13:39.12:0,39,603	0/0:9,0:9:23.72:0,24,352	1/1:23,1:23:53.23:389,53,0	0/0:20,0:20:10.97:0,11,92	0/0:12,0:12:18.09:0,18,46	1/1:16,1:17:35.49:309,35,0	1/1:9,1:10:27.83:210,28,0	0/1:17,0:17:21.74:22,0,23	0/1:16,0:16:28.17:28,0,53	1/1:15,2:17:44.11:354,44,0	0/0:13,0:13:24.76:0,25,77	1/1:10,1:11:26.01:242,26,0	1/1:10,3:13:35.44:366,35,0	0/0:8,0:8:8.65:0,9,24	1/1:27,1:28:66.69:671,67,0	0/1:20,0:20:27.11:70,0,27	1/1:19,0:19:50.07:456,50,0	1/1:29,0:29:82.66:683,83,0	1/1:10,0:10:30.01:285,30,0	0/1:6,0:6:1.89:14,0,2	0/1:14,0:14:41.21:41,0,56	0/1:22,0:22:32.08:106,0,32	0/1:16,0:16:2.54:3,0,66	1/1:17,2:19:50.41:438,50,0	1/1:18,0:18:47.99:425,48,0	1/1:12,0:12:33.43:261,33,0
chr10	91770822	.	TG	T	6652.94	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.822;DP=456;FS=10.730;HRun=1;HaplotypeScore=116.0515;InbreedingCoeff=0.9755;MQ=68.54;MQ0=0;MQRankSum=-6.150;QD=15.40;ReadPosRankSum=3.168;VQSLOD=3.9949;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:86.79:509,87,0	1/1:11,0:11:29.15:177,29,0	0/0:14,0:14:41.76:0,42,499	0/0:9,0:9:23.72:0,24,291	1/1:20,1:20:52.45:333,52,0	1/1:20,0:20:52.26:272,52,0	1/1:12,0:12:34.42:185,34,0	1/1:16,1:17:25.12:182,25,0	1/1:10,0:10:24.94:154,25,0	1/1:17,0:17:48.68:346,49,0	1/1:16,0:16:37.73:255,38,0	1/1:17,0:17:37.14:198,37,0	1/1:14,0:14:37.21:185,37,0	1/1:10,0:10:24.81:155,25,0	1/1:13,0:13:33.67:214,34,0	1/1:7,0:7:20.12:117,20,0	1/1:21,7:28:62.15:397,62,0	1/1:20,0:20:57.58:396,58,0	1/1:17,1:18:46.01:288,46,0	1/1:27,2:29:78.17:471,78,0	1/1:10,0:10:29.26:211,29,0	1/1:5,0:5:11.68:70,12,0	1/1:15,0:15:34.18:223,34,0	1/1:22,0:22:58.70:411,59,0	1/1:16,0:16:38.18:219,38,0	1/1:19,0:19:46.76:283,47,0	1/1:15,2:17:43.19:244,43,0	1/1:12,0:12:29.02:156,29,0
chr10	91771072	.	A	AT	1558.95	PASS	AB=0.858;AC=40;AF=0.714;AN=56;BaseQRankSum=-0.736;DP=408;FS=2.037;HRun=14;HaplotypeScore=54.1473;InbreedingCoeff=0.1568;MQ=67.89;MQ0=15;MQRankSum=0.640;QD=4.11;ReadPosRankSum=1.485;VQSLOD=0.5215;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:14:2.22:7,2,0	0/1:8,0:8:0:0,0,0	0/0:16,0:11:8.68:0,9,53	0/0:11,1:11:9.85:0,10,50	1/1:13,0:13:5.94:43,6,0	0/1:7,9:16:4.27:91,0,4	0/1:12,8:20:52.06:70,0,52	1/1:14,0:13:2.80:13,3,0	0/1:11,0:11:0:0,0,0	1/1:5,12:16:17.19:269,17,0	0/1:10,3:11:20.88:95,0,21	1/1:19,0:18:2.94:18,3,0	1/1:6,8:14:20.05:150,20,0	0/1:11,0:11:0:0,0,0	1/1:15,0:13:2.68:11,3,0	0/1:5,8:14:10.41:147,0,10	1/1:22,0:22:3.07:11,3,0	0/1:11,2:11:4.47:72,0,4	0/1:19,0:19:0:0,0,0	1/1:14,2:15:5.96:44,6,0	1/1:8,0:6:3.15:11,3,0	1/1:4,3:7:15.47:131,15,0	1/1:2,5:9:17.84:146,18,0	1/1:15,13:28:6.19:279,6,0	0/1:10,7:16:7.27:68,0,7	0/1:15,0:15:0:1,0,0	0/1:17,0:17:0:1,0,0	1/1:5,0:5:2.68:11,3,0
chr10	91771086	.	T	TAA	406.57	PASS	AC=24;AF=0.480;AN=50;BaseQRankSum=0.592;DP=262;FS=21.331;HRun=0;HaplotypeScore=51.2601;InbreedingCoeff=0.7165;MQ=56.73;MQ0=30;MQRankSum=2.897;QD=7.13;ReadPosRankSum=-5.229;VQSLOD=-0.0836;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:2:6.01:64,6,0	./.	0/0:9,0:4:8.62:0,9,106	0/0:8,0:7:12.27:0,12,99	1/1:2,0:3:2.97:30,3,0	0/0:18,0:17:33.09:0,33,418	0/0:16,0:15:26.82:0,27,346	1/1:2,0:2:6.02:92,6,0	1/1:4,0:3:5.98:47,6,0	0/0:19,0:18:51.12:0,51,640	0/0:18,0:16:35.99:0,36,429	1/1:3,0:2:3.01:37,3,0	0/0:12,0:12:30.96:0,31,390	./.	1/1:5,0:2:2.92:17,3,0	0/0:13,0:14:35.39:0,35,416	1/1:5,0:3:3.01:38,3,0	0/0:17,0:11:22.08:0,22,317	./.	1/1:4,0:3:2.58:10,3,0	1/1:4,0:3:3.01:36,3,0	0/0:9,0:9:23.90:0,24,274	0/0:13,0:13:31.65:0,32,422	0/0:26,0:25:53.94:0,54,647	0/0:18,0:16:30.09:0,30,385	1/1:7,0:7:8.99:111,9,0	1/1:6,0:6:6:74,6,0	1/1:0,3:4:3:25,3,0
chr10	91771176	.	A	AT	1472.57	PASS	AB=0.651;AC=18;AF=0.321;AN=56;BaseQRankSum=-5.319;DP=360;FS=11.390;HRun=14;HaplotypeScore=61.3156;InbreedingCoeff=0.4712;MQ=64.09;MQ0=14;MQRankSum=3.507;QD=7.96;ReadPosRankSum=3.964;VQSLOD=1.6293;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:7:8.52:0,9,56	0/0:5,0:5:11.72:0,12,77	0/0:22,0:10:13.68:0,14,74	0/0:16,0:7:11.04:0,11,71	0/0:6,0:6:10.81:0,11,89	0/1:6,7:13:1.26:114,0,1	1/1:7,10:16:4.79:165,5,0	0/0:20,0:19:47.17:0,47,305	0/0:9,0:8:14.62:0,15,96	1/1:9,4:16:7.01:152,7,0	1/1:7,13:21:5.79:155,6,0	0/0:6,0:6:14.61:0,15,95	0/1:4,5:9:1.27:114,0,1	0/0:6,0:5:2.48:0,2,65	0/0:9,0:8:20.57:0,21,132	1/1:2,9:12:10.49:197,10,0	0/0:10,0:8:8.84:0,9,55	0/1:12,13:21:24.81:178,0,25	0/0:9,0:9:0.14:0,0,126	0/0:13,0:13:15.74:0,16,100	0/0:4,0:3:5.90:0,6,38	1/1:8,7:15:6:53,6,0	1/1:8,14:23:29.74:241,30,0	1/1:3,11:14:1.73:139,2,0	0/1:9,10:19:14.54:134,0,15	0/0:13,1:14:6.10:0,6,165	0/0:13,0:13:6.14:0,6,164	0/0:3,0:3:2.93:0,3,19
chr10	91773518	.	AACACACACACACACACACAC	A	4233.08	PASS	AB=0.731;AC=19;AF=0.339;AN=56;BaseQRankSum=8.470;DP=498;FS=21.442;HRun=0;HaplotypeScore=225.8595;InbreedingCoeff=0.6866;MQ=57.98;MQ0=10;MQRankSum=-6.397;QD=20.55;ReadPosRankSum=-4.232;VQSLOD=1.8235;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:23:27.09:0,27,1430	0/0:3,0:5:5.98:0,6,46	0/0:20,0:12:12.04:0,12,344	0/0:28,0:15:12.04:0,12,274	0/0:11,0:14:24.08:0,24,1476	1/1:10,7:17:15.05:462,15,0	0/1:9,7:16:13.96:108,0,14	0/0:16,0:14:15.04:0,15,507	0/0:7,0:14:21.53:0,22,1283	0/1:9,8:17:99:432,0,137	1/1:10,6:16:8.98:114,9,0	0/0:6,0:11:7.53:0,8,954	1/1:9,14:24:20.10:847,20,0	0/0:10,0:14:15.05:0,15,1136	0/0:13,0:23:27.08:0,27,1579	1/1:10,15:27:18.06:833,18,0	0/0:17,0:25:24.08:0,24,1493	0/1:7,2:9:99:187,0,117	0/0:10,0:8:9.03:0,9,423	0/0:7,0:10:18.06:0,18,1201	0/0:19,0:28:42.14:0,42,2748	1/1:8,7:15:12.04:399,12,0	1/1:15,15:31:18.60:337,19,0	1/1:12,7:19:13.24:157,13,0	1/1:6,9:15:15.05:357,15,0	0/0:14,0:12:21.06:0,21,1333	0/0:22,0:24:42.14:0,42,2813	0/0:7,0:9:18.06:0,18,987
chr10	91774719	.	AGTGCC	A	7877.65	PASS	AB=0.612;AC=22;AF=0.393;AN=56;BaseQRankSum=15.865;DP=534;FS=31.653;HRun=0;HaplotypeScore=196.2091;InbreedingCoeff=0.4885;MQ=78.78;MQ0=0;MQRankSum=-17.024;QD=29.28;ReadPosRankSum=3.624;VQSLOD=3.0600;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,21:27:26.63:719,27,0	0/1:1,4:5:1.98:161,0,2	0/0:19,0:19:54.18:0,54,1557	0/0:15,0:15:40.37:0,40,1074	0/1:6,12:18:2.56:439,0,3	0/0:18,0:17:51.17:0,51,1568	0/0:29,0:29:87.28:0,87,2641	0/1:10,11:21:74.71:447,0,75	1/1:3,16:19:18.03:670,18,0	0/0:24,0:24:72.25:0,72,2225	0/0:20,0:20:60.19:0,60,1709	1/1:3,20:23:36.06:839,36,0	0/0:22,0:22:66.23:0,66,2122	1/1:5,19:24:23.10:838,23,0	1/1:1,15:16:48.16:707,48,0	0/0:11,0:11:33.11:0,33,1095	0/1:11,7:18:98.60:278,0,99	0/0:33,0:32:96.33:0,96,3013	0/1:8,15:23:44.21:599,0,44	1/1:3,7:10:24.91:307,25,0	0/1:11,16:27:4.46:517,0,4	0/0:12,0:12:36.10:0,36,999	0/0:17,0:17:47.82:0,48,1460	0/0:28,0:28:81.28:0,81,2592	0/0:17,0:16:48.16:0,48,1597	0/1:4,14:18:99:638,0,146	1/1:2,14:16:18.48:593,18,0	0/1:1,3:4:9.84:126,0,10
chr10	91774725	.	AG	A	2348.91	PASS	AB=0.606;AC=20;AF=0.357;AN=56;BaseQRankSum=16.787;DP=528;FS=17.019;HRun=1;HaplotypeScore=169.4727;InbreedingCoeff=0.2665;MQ=80.65;MQ0=0;MQRankSum=-17.201;QD=8.93;ReadPosRankSum=3.905;VQSLOD=-0.1643;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:5,21:26:9.04:219,0,9	0/1:3,4:7:44.95:48,0,45	0/0:21,0:21:58.72:0,59,847	0/0:15,0:15:39:0,39,578	0/1:5,12:17:22.49:103,0,22	0/0:17,0:16:51.17:0,51,813	0/0:29,0:29:87.30:0,87,1385	0/1:8,11:19:99:140,0,117	0/1:3,16:19:13.63:223,0,14	0/0:25,0:25:75.24:0,75,1159	0/0:17,0:17:51.16:0,51,791	1/1:1,20:21:36.89:289,37,0	0/0:25,0:25:75.24:0,75,1153	1/1:4,19:23:59.95:318,60,0	1/1:3,15:18:34.83:241,35,0	0/0:11,0:11:33.11:0,33,528	0/1:6,7:13:77.94:78,0,129	0/0:31,0:30:93.32:0,93,1482	0/1:10,15:25:99:196,0,147	1/1:1,7:8:16.22:91,16,0	0/1:10,16:26:31.95:157,0,32	0/0:11,0:11:33.11:0,33,527	0/0:16,0:16:44.91:0,45,719	0/0:29,0:29:84.29:0,84,1339	0/0:18,0:17:54.16:0,54,836	0/1:3,14:17:47.27:189,0,47	1/1:4,14:18:17.52:206,18,0	0/1:3,3:6:2.57:41,0,3
chr10	91775729	.	TTC	T	2166.90	PASS	AB=0.992;AC=25;AF=0.446;AN=56;BaseQRankSum=10.149;DP=537;FS=19.574;HRun=0;HaplotypeScore=108.8542;InbreedingCoeff=0.6508;MQ=62.11;MQ0=10;MQRankSum=-0.870;QD=7.30;ReadPosRankSum=-5.346;VQSLOD=0.7000;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:28:2:170,2,0	0/1:6,0:6:11.48:22,0,11	0/0:47,0:19:47.85:0,48,635	0/0:36,0:17:37.19:0,37,486	1/1:18,0:18:20.77:206,21,0	0/0:9,0:9:26.92:0,27,393	0/0:12,0:12:26.96:0,27,342	1/1:39,0:38:16.66:383,17,0	1/1:16,0:16:25.57:141,26,0	0/0:32,0:32:90.14:0,90,1226	0/0:12,0:12:36.04:0,36,503	1/1:18,1:19:14.87:175,15,0	0/0:20,0:20:60.15:0,60,868	0/1:13,0:11:3.45:45,0,3	1/1:13,0:13:13.73:92,14,0	0/0:7,0:7:21.05:0,21,316	1/1:45,0:44:17.21:303,17,0	0/0:16,0:16:45.02:0,45,600	1/1:25,1:24:33.78:299,34,0	0/1:9,0:6:4.23:23,0,4	1/1:6,1:7:16.79:117,17,0	0/0:7,0:7:21.06:0,21,304	0/0:4,0:4:12.01:0,12,168	0/0:20,0:20:42.85:0,43,855	0/0:18,0:18:54.16:0,54,827	0/1:23,1:24:79.55:184,0,80	1/1:20,1:21:6.72:149,7,0	0/1:12,0:11:4.05:64,0,4
chr10	91775730	.	TC	T	5122.10	PASS	AB=0.962;AC=29;AF=0.518;AN=56;BaseQRankSum=14.686;DP=531;FS=2.559;HRun=1;HaplotypeScore=90.3356;InbreedingCoeff=0.9185;MQ=61.25;MQ0=10;MQRankSum=-4.320;QD=17.42;ReadPosRankSum=-3.057;VQSLOD=4.2353;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,3:28:69.03:485,69,0	1/1:6,0:6:10.67:66,11,0	0/0:44,1:19:47.73:0,48,526	0/0:37,0:16:32.86:0,33,335	1/1:16,1:17:44.66:356,45,0	0/0:10,0:10:23.91:0,24,288	0/0:10,0:10:27.01:0,27,287	1/1:33,5:37:99:729,100,0	1/1:16,1:17:47.39:351,47,0	0/0:31,0:31:90.14:0,90,1016	0/0:12,0:12:33.55:0,34,390	1/1:19,0:19:53.90:381,54,0	0/0:20,0:20:60.13:0,60,689	1/1:9,3:10:18.58:143,19,0	1/1:11,3:14:26.50:229,26,0	0/0:7,0:7:21.05:0,21,251	1/1:43,2:44:99:735,103,0	0/0:16,0:16:45.02:0,45,489	1/1:20,4:22:57.17:442,57,0	1/1:9,0:6:15.53:98,16,0	1/1:7,0:7:20.71:140,21,0	0/0:7,0:7:21.05:0,21,247	0/0:4,0:4:12.01:0,12,135	0/0:19,1:20:39.52:0,40,664	0/0:18,0:18:54.15:0,54,653	0/1:24,1:25:10.98:358,0,11	1/1:17,2:19:46.41:395,46,0	1/1:12,1:12:30.79:213,31,0
chr10	91775736	.	T	TC	2950.81	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=13.343;DP=520;FS=13.801;HRun=2;HaplotypeScore=92.3408;InbreedingCoeff=0.8805;MQ=60.13;MQ0=17;MQRankSum=-0.301;QD=10.73;ReadPosRankSum=-2.173;VQSLOD=0.2168;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:27:50.72:285,51,0	1/1:6,0:6:5.45:53,5,0	0/0:41,0:15:33.08:0,33,382	0/0:37,0:15:11.71:0,12,189	1/1:16,0:16:19.83:168,20,0	0/0:11,0:11:27.06:0,27,308	0/0:12,0:11:32.97:0,33,357	1/1:34,2:34:65.67:460,66,0	1/1:15,0:15:34.45:259,34,0	0/0:27,0:27:72.21:0,72,864	0/0:13,0:13:30.07:0,30,347	1/1:15,0:15:36.49:223,36,0	0/0:24,0:24:66.17:0,66,771	1/1:12,1:11:19.60:144,20,0	1/1:13,2:15:25.72:219,26,0	0/0:7,0:7:21.07:0,21,260	1/1:41,1:42:78.49:473,78,0	0/0:15,0:15:42.10:0,42,504	1/1:20,1:19:37.25:288,37,0	1/1:8,0:6:7.39:38,7,0	1/1:5,0:5:8.72:58,9,0	0/0:13,0:12:33.01:0,33,352	0/0:4,0:4:12.04:0,12,148	0/0:22,0:22:63.10:0,63,726	0/0:17,0:17:48.15:0,48,594	0/1:23,0:23:21.06:267,0,21	1/1:18,1:19:17.56:92,18,0	1/1:11,1:10:20.12:150,20,0
chr10	91776008	.	CAACAT	C	290.15	PASS	AB=0.829;AC=5;AF=0.089;AN=56;BaseQRankSum=2.612;DP=368;FS=24.587;HRun=0;HaplotypeScore=125.9770;InbreedingCoeff=-0.1058;MQ=77.64;MQ0=0;MQRankSum=-4.543;QD=4.40;ReadPosRankSum=-0.591;VQSLOD=0.8932;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:41.94:0,42,1078	0/1:4,2:6:57.51:58,0,287	0/0:12,0:12:33.09:0,33,986	0/0:9,0:9:21.03:0,21,544	0/1:13,2:15:30.34:30,0,1009	0/0:23,0:22:66.23:0,66,2069	0/0:7,0:7:21.03:0,21,593	0/0:29,0:29:87.29:0,87,2745	0/0:13,0:13:39.13:0,39,1213	0/0:24,0:24:69.24:0,69,2208	0/0:16,0:16:48.16:0,48,1494	0/0:6,0:6:18.06:0,18,595	0/0:10,0:10:30.09:0,30,874	0/0:4,0:4:12.04:0,12,399	0/0:10,0:10:30.03:0,30,843	0/0:5,0:5:15.05:0,15,500	0/0:20,0:20:60.10:0,60,1835	0/0:21,0:21:63.22:0,63,2099	0/0:18,0:18:48.16:0,48,1569	0/1:7,3:10:99:111,0,620	0/0:14,0:14:39.13:0,39,1244	0/0:2,0:2:6.02:0,6,200	0/0:5,0:5:15.05:0,15,495	0/0:8,0:8:24.08:0,24,772	0/0:17,0:17:51.18:0,51,1672	0/1:20,3:23:99:102,0,1886	0/0:15,0:15:39.07:0,39,1159	0/1:10,2:12:99:106,0,810
chr10	91776029	.	TTAAA	T	2463.35	PASS	AB=0.786;AC=29;AF=0.518;AN=56;BaseQRankSum=8.277;DP=284;FS=5.238;HRun=0;HaplotypeScore=93.3585;InbreedingCoeff=0.6996;MQ=60.11;MQ0=0;MQRankSum=-7.593;QD=14.93;ReadPosRankSum=-2.509;VQSLOD=2.5452;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,6:12:7.23:171,7,0	1/1:4,1:5:4.83:44,5,0	0/0:4,0:4:2.09:0,2,36	0/0:3,0:3:2.03:0,2,5	0/1:8,3:11:0.45:60,0,0	0/0:18,0:17:51.17:0,51,1288	0/0:3,0:3:8.99:0,9,128	1/1:24,4:31:46.50:560,46,0	1/1:5,3:8:10.49:187,10,0	0/0:17,0:17:50.99:0,51,1053	0/0:13,0:13:39.09:0,39,705	1/1:3,1:4:1.89:51,2,0	0/0:5,0:5:15:0,15,132	1/1:1,2:3:0.06:17,0,0	1/1:3,4:7:16.23:246,16,0	0/0:8,0:8:24.07:0,24,493	1/1:10,3:13:15.71:203,16,0	0/0:22,0:22:66.16:0,66,1476	1/1:13,2:15:17.50:205,18,0	1/1:5,1:6:5.78:60,6,0	1/1:4,1:5:3.69:45,4,0	0/0:4,0:4:12.04:0,12,316	0/0:2,0:2:6:0,6,93	0/0:4,0:4:12.01:0,12,206	0/0:16,0:16:48.14:0,48,1124	1/1:17,8:24:52.27:585,52,0	1/1:3,4:7:3.15:96,3,0	1/1:9,2:11:5.02:126,5,0
chr10	91776030	.	TAA	T	213.07	PASS	AB=0.914;AC=11;AF=0.196;AN=56;BaseQRankSum=9.292;DP=278;FS=3.267;HRun=3;HaplotypeScore=86.1330;InbreedingCoeff=-0.2238;MQ=58.66;MQ0=0;MQRankSum=-8.463;QD=1.76;ReadPosRankSum=1.956;VQSLOD=-0.6559;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:12:32.42:32,0,189	0/1:3,0:4:14.28:14,0,43	0/0:3,0:3:5.65:0,6,28	0/0:4,0:3:2.84:0,3,14	0/1:8,1:9:10.01:10,0,117	0/0:19,0:18:57.20:0,57,1049	0/0:3,0:3:9.02:0,9,129	0/1:31,0:31:0.25:0,0,388	0/1:7,0:7:2.96:3,0,96	0/0:17,0:17:51.16:0,51,887	0/0:14,0:14:39.13:0,39,688	0/1:2,0:2:4.13:4,0,21	0/0:5,0:5:15.04:0,15,217	0/0:3,0:3:8.99:0,9,82	0/1:8,0:7:15.01:15,0,28	0/0:8,0:8:24.08:0,24,432	0/0:11,0:12:10.72:0,11,171	0/0:23,0:23:69.20:0,69,1204	0/0:15,0:15:17.88:0,18,210	0/1:3,2:5:54.07:54,0,68	0/0:5,0:5:12.72:0,13,96	0/0:4,0:4:12.04:0,12,222	0/0:2,0:2:6.01:0,6,80	0/0:4,0:4:9.03:0,9,159	0/0:16,0:16:48.15:0,48,847	0/1:20,5:25:99:197,0,203	0/1:7,0:7:3.47:3,0,51	0/1:9,0:10:4.34:4,0,136
chr10	91776044	.	AATTT	A	1814.74	PASS	AB=0.977;AC=24;AF=0.444;AN=54;BaseQRankSum=7.219;DP=271;FS=13.771;HRun=0;HaplotypeScore=79.2410;InbreedingCoeff=0.6059;MQ=52.88;MQ0=2;MQRankSum=-8.573;QD=12.87;ReadPosRankSum=0.700;VQSLOD=2.0053;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:11.97:171,12,0	0/0:4,0:4:2.96:0,3,19	0/0:2,0:1:3:0,3,27	0/0:3,0:3:2.36:0,2,7	1/1:10,0:9:5.96:76,6,0	0/0:21,0:20:60.17:0,60,1394	0/0:2,0:2:6.02:0,6,140	1/1:31,3:27:42.49:527,42,0	1/1:5,0:5:9.03:156,9,0	0/0:17,0:17:45.12:0,45,855	0/0:11,0:11:27.08:0,27,595	1/1:2,0:2:3.01:51,3,0	0/0:4,0:4:7.56:0,8,102	1/1:5,0:5:2.97:20,3,0	1/1:7,1:5:12.04:207,12,0	0/0:8,0:8:15.04:0,15,336	1/1:12,0:12:13.55:180,14,0	0/0:23,0:23:63.16:0,63,1424	1/1:10,0:10:6.02:103,6,0	1/1:4,0:4:1.77:4,2,0	./.	0/0:6,0:6:18.05:0,18,364	0/0:5,0:5:14.82:0,15,196	0/0:2,0:2:6.02:0,6,154	0/0:17,0:17:48.16:0,48,1113	0/1:20,1:18:11.10:340,0,11	1/1:9,0:9:8.24:111,8,0	0/1:10,0:10:9.88:54,0,10
chr10	91776102	.	C	CA	1804.46	PASS	AC=24;AF=0.480;AN=50;BaseQRankSum=5.601;DP=315;FS=38.391;HRun=0;HaplotypeScore=48.2201;InbreedingCoeff=0.8515;MQ=69.01;MQ0=4;MQRankSum=-9.664;QD=26.54;ReadPosRankSum=-2.618;VQSLOD=1.1442;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,7:8:6.02:95,6,0	./.	0/0:25,0:16:45.11:0,45,563	0/0:31,0:19:45.69:0,46,561	1/1:0,6:5:8.94:112,9,0	0/0:25,0:25:75.25:0,75,1049	0/0:23,0:23:66.22:0,66,923	1/1:1,11:12:33.08:499,33,0	./.	0/0:18,0:18:54.18:0,54,742	0/0:14,0:14:39.08:0,39,522	1/1:0,1:1:3.01:48,3,0	0/0:12,0:12:36.12:0,36,496	./.	1/1:0,4:1:3.01:48,3,0	0/0:8,0:8:24.08:0,24,336	1/1:1,4:4:12.04:176,12,0	0/0:29,0:29:76.31:0,76,1156	1/1:0,4:4:3.01:48,3,0	1/1:1,6:7:15.05:238,15,0	1/1:0,2:1:3.01:48,3,0	0/0:11,0:11:33.11:0,33,461	0/0:20,0:20:60.20:0,60,838	0/0:12,0:12:36.12:0,36,503	0/0:16,0:16:48.15:0,48,654	1/1:1,5:5:15.01:211,15,0	1/1:0,8:8:15.05:239,15,0	1/1:0,5:5:15.05:238,15,0
chr10	91776200	.	G	GCCC	6465.75	PASS	AB=0.651;AC=17;AF=0.304;AN=56;BaseQRankSum=9.037;DP=406;FS=138.538;HRun=3;HaplotypeScore=101.4815;InbreedingCoeff=-0.0754;MQ=70.83;MQ0=2;MQRankSum=-11.516;QD=31.54;ReadPosRankSum=0.076;VQSLOD=0.8683;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:39.13:843,39,0	0/1:2,3:5:58.62:59,0,85	0/0:21,0:20:60.20:0,60,927	0/0:29,0:26:43.12:0,43,991	0/1:8,3:11:99:176,0,235	0/0:13,0:13:39.12:0,39,600	0/0:21,0:21:60.20:0,60,960	0/1:15,5:18:99:360,0,375	1/1:2,10:12:27.09:582,27,0	0/0:5,0:5:15.05:0,15,239	0/0:7,0:7:21.07:0,21,334	0/1:3,7:11:20.85:514,0,21	0/0:13,0:13:36.10:0,36,551	0/1:2,12:15:5.95:808,0,6	0/1:3,10:13:99:445,0,114	0/0:9,0:9:27.08:0,27,410	0/1:6,3:10:32.85:249,0,33	0/0:25,0:25:60.20:0,60,940	0/1:7,9:17:99:728,0,141	0/1:6,8:14:99:315,0,119	0/1:3,4:10:83.86:124,0,84	0/0:8,0:8:21.07:0,21,336	0/0:14,0:14:42.13:0,42,647	0/0:25,0:25:75.26:0,75,1199	0/0:9,0:9:27.09:0,27,432	0/1:9,10:19:99:621,0,338	0/1:3,8:11:89.85:444,0,90	0/1:8,3:11:99:200,0,213
chr10	91776632	.	AAAAC	A	1710.12	PASS	AB=0.944;AC=7;AF=0.125;AN=56;BaseQRankSum=-1.393;DP=693;FS=7.310;HRun=0;HaplotypeScore=167.6502;InbreedingCoeff=0.8037;MQ=62.55;MQ0=9;MQRankSum=0.448;QD=19.66;ReadPosRankSum=1.496;VQSLOD=3.1161;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:99:0,103,373	1/1:4,4:8:12.04:185,12,0	0/0:23,0:19:6.12:0,6,343	0/0:26,0:23:36.12:0,36,785	0/0:25,0:25:55:0,55,200	0/0:14,0:14:42.14:0,42,999	0/1:16,1:17:13.03:13,0,714	0/0:27,0:25:27.45:0,27,100	0/0:16,0:15:29.94:0,30,109	0/0:18,0:18:48.16:0,48,1168	0/0:24,0:24:60.21:0,60,1406	0/0:24,0:24:37.43:0,37,136	0/0:22,0:22:54.19:0,54,1265	0/0:22,0:22:47.51:0,48,173	1/1:6,17:22:33.11:541,33,0	0/0:21,0:21:60.21:0,60,1458	1/1:21,18:38:72.16:1116,72,0	0/0:29,0:29:75.26:0,75,1758	0/0:23,0:20:30.56:0,31,115	0/0:29,0:29:52.13:0,52,188	0/0:37,0:35:59.99:0,60,219	0/0:22,0:22:51.18:0,51,1243	0/0:14,0:14:24.08:0,24,550	0/0:47,0:47:99:0,105,2544	0/0:12,0:12:33.11:0,33,796	0/0:30,0:30:57.91:0,58,273	0/0:23,0:23:44.92:0,45,163	0/0:29,0:28:57.27:0,57,207
chr10	91776640	.	CAA	C	13063.90	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=17.232;DP=697;FS=8.507;HRun=3;HaplotypeScore=103.0924;InbreedingCoeff=0.7932;MQ=61.19;MQ0=10;MQRankSum=-0.106;QD=32.66;ReadPosRankSum=2.728;VQSLOD=4.0780;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,50:49:99:2052,135,0	0/1:5,0:5:7.57:8,0,37	0/0:26,0:21:52.33:0,52,746	0/0:21,0:18:51.17:0,51,904	1/1:0,27:27:75.25:1137,75,0	0/0:14,0:14:42.14:0,42,811	0/0:20,0:20:15.04:0,15,875	1/1:0,26:24:69.17:977,69,0	1/1:1,17:17:39.13:597,39,0	0/0:17,0:17:51.17:0,51,971	0/0:25,0:25:72.24:0,72,1312	1/1:1,21:22:54.18:825,54,0	0/0:22,0:22:66.21:0,66,1197	1/1:0,25:25:60.20:917,60,0	0/1:20,0:19:36.39:36,0,78	0/0:22,0:22:66.23:0,66,1244	0/1:38,0:37:50.72:51,0,391	0/0:29,0:29:87.30:0,87,1619	1/1:2,25:24:69.23:1039,69,0	1/1:0,28:28:78.26:1189,78,0	1/1:1,31:30:84.29:1278,84,0	0/0:22,0:22:66.18:0,66,1192	0/0:17,0:17:45.14:0,45,746	0/0:48,0:48:99:0,144,2527	0/0:14,0:14:39.13:0,39,739	1/1:2,25:27:20.31:1078,20,0	1/1:1,22:23:54.18:826,54,0	1/1:1,31:31:69.23:1056,69,0
chr10	91776943	.	G	GTATAA	25146.46	PASS	AB=0.571;AC=29;AF=0.518;AN=56;BaseQRankSum=-12.237;DP=719;FS=3.343;HRun=0;HaplotypeScore=122.1346;InbreedingCoeff=0.9256;MQ=65.63;MQ0=1;MQRankSum=-7.457;QD=63.99;ReadPosRankSum=1.936;VQSLOD=6.1368;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,22:30:63:1532,63,0	1/1:2,8:10:14.94:247,15,0	0/0:24,0:23:56.54:0,57,1025	0/0:19,0:19:25.76:0,26,546	1/1:6,32:38:78.18:2160,78,0	0/0:28,0:28:81.26:0,81,1647	0/0:24,0:24:69.24:0,69,1434	1/1:11,20:33:90.30:2624,90,0	1/1:3,22:24:60.16:1784,60,0	0/0:29,0:28:81.28:0,81,1684	0/0:23,0:23:66.23:0,66,1384	1/1:4,20:25:57.11:1620,57,0	0/0:21,0:21:63.22:0,63,1322	1/1:5,31:36:90.18:2565,90,0	1/1:3,31:35:75.08:2033,75,0	0/0:32,0:32:90.30:0,90,1818	1/1:7,19:27:57.15:1637,57,0	0/0:19,0:19:47.33:0,47,1044	1/1:3,9:12:36.12:1101,36,0	1/1:4,25:30:75.01:1778,75,0	1/1:2,11:13:27.09:837,27,0	0/0:39,0:39:99:0,108,2267	0/0:26,0:26:75.20:0,75,1469	0/0:28,0:28:78.25:0,78,1578	0/0:14,0:14:42.12:0,42,842	0/1:8,22:32:41.77:2051,0,42	1/1:4,29:34:81.07:2434,81,0	1/1:1,8:11:24.08:744,24,0
chr10	91777352	.	CTT	C	3922.25	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-15.012;DP=594;FS=13.002;HRun=14;HaplotypeScore=125.7041;InbreedingCoeff=0.9889;MQ=76.74;MQ0=3;MQRankSum=1.137;QD=17.83;ReadPosRankSum=4.180;VQSLOD=1.3381;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:79.21:0,79,709	0/0:12,0:12:33.04:0,33,311	0/0:39,0:30:33.63:0,34,442	0/0:24,0:19:22.97:0,23,315	0/0:29,0:28:68.86:0,69,667	1/1:5,13:19:26.71:234,27,0	1/1:10,16:28:46.36:440,46,0	0/0:30,0:29:59.94:0,60,637	0/0:20,0:20:51.07:0,51,483	1/1:4,16:20:44.91:410,45,0	1/1:2,13:15:29.67:324,30,0	0/0:15,0:16:39.06:0,39,405	1/1:4,9:14:29.75:261,30,0	0/0:14,0:13:27.05:0,27,270	0/0:17,0:17:41.66:0,42,404	1/1:3,8:11:21:194,21,0	0/0:25,0:25:45.07:0,45,439	1/1:6,12:19:28.12:300,28,0	0/0:20,0:20:36.07:0,36,405	0/0:25,0:25:54.06:0,54,509	0/0:12,0:12:24.03:0,24,226	1/1:3,19:22:45:416,45,0	1/1:6,17:26:14.18:387,14,0	1/1:2,24:26:65.79:595,66,0	1/1:5,14:17:38.99:361,39,0	0/0:18,1:19:11.29:0,11,325	0/0:26,0:26:54.07:0,54,507	0/0:11,0:12:17.83:0,18,239
chr10	91777366	.	T	TA	6317.93	PASS	AB=0.625;AC=29;AF=0.518;AN=56;BaseQRankSum=-6.744;DP=539;FS=1.145;HRun=2;HaplotypeScore=95.0863;InbreedingCoeff=0.9319;MQ=75.99;MQ0=2;MQRankSum=0.049;QD=22.97;ReadPosRankSum=-0.364;VQSLOD=4.5706;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,17:28:71.14:753,71,0	1/1:3,9:12:34.32:379,34,0	0/0:35,0:27:25.93:0,26,302	0/0:21,0:15:24.83:0,25,223	1/1:10,15:25:62.16:693,62,0	0/0:16,0:16:32.47:0,32,210	0/0:21,0:21:61.64:0,62,385	1/1:18,7:24:14.25:364,14,0	1/1:10,9:20:54.34:580,54,0	0/0:19,0:19:50.08:0,50,326	0/0:17,0:18:50.16:0,50,324	1/1:6,9:15:20.97:251,21,0	0/0:17,0:17:47.20:0,47,308	1/1:2,12:13:26.98:310,27,0	1/1:4,9:14:3.01:342,3,0	0/0:10,0:10:26.59:0,27,176	1/1:4,21:26:41.14:475,41,0	0/0:16,0:17:44.24:0,44,283	1/1:5,4:18:31.22:265,31,0	1/1:9,12:21:48.20:506,48,0	1/1:0,10:10:24.06:284,24,0	0/0:22,0:22:52.27:0,52,320	0/0:25,0:25:61.91:0,62,393	0/0:26,0:25:67.67:0,68,416	0/0:17,0:16:47.24:0,47,309	1/1:2,12:14:18.17:378,18,0	1/1:3,17:21:48.73:556,49,0	0/1:4,6:10:0.77:180,0,1
chr10	91777368	.	A	AT	1466.62	PASS	AB=0.984;AC=20;AF=0.357;AN=56;BaseQRankSum=7.452;DP=518;FS=0.780;HRun=2;HaplotypeScore=106.9399;InbreedingCoeff=0.2635;MQ=75.20;MQ0=2;MQRankSum=-1.719;QD=5.64;ReadPosRankSum=1.240;VQSLOD=0.6783;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,1:27:20.84:194,0,21	1/1:12,0:12:6.99:106,7,0	0/0:31,0:23:22.45:0,22,326	0/0:21,1:15:27.41:0,27,291	1/1:24,0:23:7.33:186,7,0	0/0:14,0:14:33.10:0,33,400	0/0:21,0:21:60.41:0,60,681	0/1:23,0:22:9.99:10,0,130	0/1:19,0:19:1.97:120,0,2	0/0:18,0:18:51.15:0,51,603	0/0:18,0:18:51.10:0,51,594	0/1:12,2:14:10.24:125,0,10	0/0:16,0:16:48.13:0,48,548	1/1:13,1:13:25.01:119,25,0	0/1:13,0:13:13.54:78,0,14	0/0:9,0:9:27.08:0,27,328	0/1:27,0:27:26.30:129,0,26	0/0:18,0:18:42.13:0,42,504	1/1:13,0:13:4.99:35,5,0	0/1:19,0:19:33.24:131,0,33	1/1:10,0:10:18.99:93,19,0	0/0:21,0:21:56.33:0,56,617	0/0:26,0:26:63.12:0,63,723	0/0:27,0:26:69.21:0,69,809	0/0:17,0:16:48.14:0,48,573	0/1:14,0:14:6.15:82,0,6	0/1:20,0:20:9.92:193,0,10	0/1:10,0:10:7.56:48,0,8
chr10	91777647	.	TGG	T	11487.67	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=8.132;DP=610;FS=0.000;HRun=3;HaplotypeScore=109.5996;InbreedingCoeff=0.9917;MQ=68.98;MQ0=4;MQRankSum=-5.977;QD=34.39;ReadPosRankSum=3.361;VQSLOD=4.4171;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:30:74.66:965,75,0	1/1:1,7:8:24.07:307,24,0	0/0:34,1:18:9.86:0,10,352	0/0:18,0:10:20.17:0,20,312	1/1:1,31:32:90.26:1288,90,0	0/0:24,0:24:69.23:0,69,1167	0/0:20,0:20:57.17:0,57,971	1/1:2,24:26:66.18:931,66,0	1/1:3,13:16:39.13:559,39,0	0/0:23,0:23:66.22:0,66,1049	0/0:32,0:32:87.29:0,87,1367	1/1:3,17:20:39.13:575,39,0	0/0:14,0:14:36.12:0,36,545	1/1:3,15:18:42.14:623,42,0	1/1:3,22:25:45.07:620,45,0	0/0:17,0:17:39.09:0,39,661	1/1:4,29:33:68.83:870,69,0	0/0:23,0:23:51.16:0,51,794	1/1:2,23:25:72.24:1056,72,0	1/1:4,24:28:75.25:1076,75,0	1/1:0,23:23:51.17:764,51,0	0/0:10,0:11:24.07:0,24,375	0/0:24,0:24:66.70:0,67,1197	0/0:16,0:16:39.13:0,39,613	0/0:18,0:18:39.13:0,39,630	1/1:0,18:18:51.17:769,51,0	1/1:0,18:19:48.16:718,48,0	1/1:1,11:12:24.08:366,24,0
chr10	91777648	.	GGGTTT	G	3944.49	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=9.928;DP=602;FS=11.093;HRun=0;HaplotypeScore=165.1791;InbreedingCoeff=0.8679;MQ=67.62;MQ0=4;MQRankSum=-2.404;QD=12.03;ReadPosRankSum=4.855;VQSLOD=2.2313;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:31:1.19:143,1,0	1/1:8,0:8:2.89:36,3,0	0/0:35,0:16:40.32:0,40,525	0/0:18,0:10:20.46:0,20,437	1/1:31,0:32:39.10:344,39,0	0/0:24,0:24:69.23:0,69,1835	0/0:20,0:20:57.17:0,57,1458	1/1:25,0:25:51.18:694,51,0	1/1:13,1:16:30.71:207,31,0	0/0:24,0:24:66.70:0,67,1577	0/0:31,0:31:87.30:0,87,2199	1/1:17,2:19:21.62:224,22,0	0/0:13,0:13:36.12:0,36,1010	1/1:15,3:18:31.30:339,31,0	1/1:23,0:24:14.04:124,14,0	0/0:16,0:16:41.93:0,42,1019	0/1:31,0:31:25.41:122,0,25	0/0:23,0:23:51.16:0,51,1272	1/1:24,1:25:54.49:644,54,0	1/1:24,0:26:42.81:315,43,0	1/1:23,0:23:41.17:186,41,0	0/0:11,0:11:27.05:0,27,637	0/0:25,0:25:69.71:0,70,2031	0/0:16,0:16:39.13:0,39,1048	0/0:18,0:18:39.13:0,39,1115	1/1:18,0:18:41.68:289,42,0	1/1:19,0:19:21.76:162,22,0	1/1:11,1:12:18.11:115,18,0
chr10	91777650	.	G	GT	2807.11	PASS	AB=0.767;AC=28;AF=0.500;AN=56;BaseQRankSum=-10.903;DP=618;FS=4.491;HRun=13;HaplotypeScore=133.1471;InbreedingCoeff=0.6628;MQ=66.95;MQ0=4;MQRankSum=2.420;QD=7.57;ReadPosRankSum=2.990;VQSLOD=2.2777;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:47.56:230,48,0	1/1:8,0:8:17.70:70,18,0	0/1:35,0:16:2.07:2,0,67	0/1:18,0:10:0.75:1,0,13	0/0:33,0:33:31:0,31,184	1/1:23,0:23:34.49:264,34,0	1/1:20,0:20:37.50:202,38,0	0/0:28,0:28:23.18:0,23,88	0/0:18,0:18:30.59:0,31,114	1/1:10,15:25:24.33:280,24,0	1/1:11,19:31:13.62:366,14,0	0/0:19,0:19:28.28:0,28,108	1/1:1,12:13:17.42:288,17,0	0/0:21,0:21:35.88:0,36,141	1/1:24,0:24:32.96:154,33,0	1/1:14,0:14:27.65:141,28,0	1/1:33,0:33:51.92:250,52,0	1/1:8,15:23:7.28:227,7,0	0/0:27,0:26:29.58:0,30,128	0/0:28,0:28:58.40:0,58,223	0/0:23,0:23:29.19:0,29,132	0/1:5,7:12:20.18:101,0,20	0/1:21,3:24:5.51:6,0,256	0/1:4,12:16:1.18:218,0,1	0/1:4,15:19:15.14:215,0,15	0/0:19,0:19:27.72:0,28,121	0/0:19,0:19:41.38:0,41,156	0/0:12,0:12:20.55:0,21,75
chr10	91777661	.	T	TG	6732.04	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=4.253;DP=624;FS=3.958;HRun=0;HaplotypeScore=123.3935;InbreedingCoeff=0.8979;MQ=65.33;MQ0=7;MQRankSum=-2.217;QD=16.54;ReadPosRankSum=8.038;VQSLOD=6.6204;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:9,20:29:68.04:740,68,0	1/1:0,7:7:21.03:218,21,0	0/0:46,0:23:38.55:0,39,350	0/0:23,0:12:16.76:0,17,147	1/1:27,3:30:66.76:390,67,0	1/1:7,17:24:63.02:767,63,0	1/1:1,19:20:39.12:503,39,0	1/1:27,0:27:33.20:307,33,0	1/1:15,0:15:38.85:194,39,0	0/0:24,0:24:35.42:0,35,274	0/0:29,0:29:8.57:0,9,171	1/1:15,0:15:29.39:144,29,0	0/0:14,0:14:2.74:0,3,62	1/1:19,0:19:40.02:192,40,0	1/1:13,12:25:56.56:585,57,0	1/1:1,14:15:17.10:361,17,0	1/1:11,21:32:74.22:748,74,0	0/1:20,0:20:1.99:2,0,77	1/1:26,1:26:40.46:356,40,0	1/1:31,0:31:67.07:351,67,0	1/1:22,1:23:53.08:296,53,0	0/0:14,0:14:15.93:0,16,156	0/0:26,0:26:59.82:0,60,746	0/0:18,0:18:9.46:0,9,142	0/0:23,0:22:21:0,21,224	1/1:17,1:18:42.33:234,42,0	1/1:22,0:22:41.97:254,42,0	1/1:8,0:8:20.80:89,21,0
chr10	91777997	.	TTATC	T	4870.80	PASS	AB=0.797;AC=41;AF=0.788;AN=52;BaseQRankSum=10.594;DP=635;FS=0.611;HRun=0;HaplotypeScore=253.0452;InbreedingCoeff=0.6576;MQ=63.99;MQ0=1;MQRankSum=-5.642;QD=9.33;ReadPosRankSum=1.462;VQSLOD=3.9439;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:5.95:43,6,0	1/1:6,0:6:8.93:65,9,0	./.	0/0:22,0:16:0.47:0,0,1	0/1:19,0:30:0.11:0,0,0	0/0:20,0:20:39.12:0,39,805	0/1:22,0:21:14.87:15,0,420	0/1:13,0:27:0:0,0,0	1/1:23,0:23:35.90:292,36,0	1/1:15,21:36:65.88:822,66,0	1/1:11,20:31:41.85:549,42,0	1/1:25,0:25:20.88:162,21,0	1/1:11,15:26:14.68:235,15,0	1/1:19,0:20:12.34:92,12,0	1/1:33,0:33:32.82:255,33,0	0/0:24,0:24:11.92:0,12,1118	1/1:16,0:16:8.91:66,9,0	1/1:5,7:12:15.05:235,15,0	1/1:14,0:24:11.99:105,12,0	1/1:23,0:23:14.95:119,15,0	1/1:25,0:25:3.56:10,4,0	1/1:10,23:33:45.08:670,45,0	1/1:9,18:27:26.85:423,27,0	1/1:3,10:14:18.06:282,18,0	0/0:20,0:20:39.13:0,39,859	1/1:23,0:23:30.01:273,30,0	1/1:25,0:25:18.85:158,19,0	./.
chr10	91778013	.	CTATCTATCTATCTATCTAT	C	10916.07	PASS	AB=0.801;AC=18;AF=0.321;AN=56;BaseQRankSum=15.562;DP=568;FS=9.277;HRun=0;HaplotypeScore=362.7210;InbreedingCoeff=0.1737;MQ=50.54;MQ0=10;MQRankSum=-13.674;QD=44.37;ReadPosRankSum=4.451;VQSLOD=2.3681;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,5:15:61.35:427,0,61	0/1:3,3:6:2.65:393,0,3	0/0:16,0:5:14.26:0,14,343	0/0:20,0:7:18.53:0,19,565	0/0:13,7:21:5.29:0,5,37	0/0:21,0:21:63.22:0,63,4603	0/0:20,0:19:57.20:0,57,3661	0/1:15,0:14:81.71:98,0,82	1/1:8,12:20:26.80:1758,27,0	0/0:35,0:35:99:0,102,5253	0/0:28,0:28:63.20:0,63,2992	0/1:17,9:28:23.92:1091,0,24	0/0:29,0:29:54.66:0,55,2353	0/1:14,0:20:99:795,0,142	1/1:14,14:28:33.34:1677,33,0	0/0:23,0:23:69.24:0,69,5445	1/1:10,6:16:6.75:450,7,0	0/0:15,0:15:39.13:0,39,1844	0/1:12,4:16:6.88:701,0,7	1/1:7,11:18:1.74:685,2,0	0/1:17,1:18:14.63:91,0,15	0/0:32,0:32:72.01:0,72,3573	0/0:26,0:26:45.15:0,45,2295	0/0:16,0:16:33.11:0,33,1646	0/0:20,0:20:60.21:0,60,4270	0/1:8,10:18:99:1570,0,106	0/1:15,9:25:19.24:1170,0,19	0/1:3,0:3:10.26:10,0,13
chr10	91779359	.	CA	C	2975.46	PASS	AB=1.000;AC=46;AF=0.958;AN=48;BaseQRankSum=1.113;DP=166;FS=0.000;HRun=2;HaplotypeScore=59.1851;InbreedingCoeff=-0.0970;MQ=75.92;MQ0=1;MQRankSum=-2.151;QD=17.92;ReadPosRankSum=1.415;VQSLOD=3.5791;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:15.51:167,16,0	./.	0/1:7,0:6:19.23:83,0,19	0/1:5,0:6:0.14:12,0,0	1/1:3,1:4:3.62:54,4,0	1/1:2,3:5:9.03:104,9,0	1/1:5,15:20:37.15:405,37,0	1/1:0,2:2:6.02:70,6,0	1/1:0,2:2:3.01:33,3,0	1/1:0,8:8:21.05:233,21,0	./.	1/1:3,1:4:5.18:59,5,0	1/1:0,2:2:3.01:34,3,0	1/1:4,3:7:12.38:108,12,0	1/1:1,6:7:15.04:173,15,0	1/1:0,2:2:6.02:68,6,0	1/1:0,21:21:38.62:441,39,0	1/1:5,5:10:18.05:203,18,0	./.	1/1:0,2:2:3.01:34,3,0	1/1:2,20:21:15.38:141,15,0	1/1:1,2:3:3:34,3,0	./.	1/1:0,5:5:9.03:102,9,0	1/1:0,7:7:20.95:220,21,0	1/1:0,7:7:20.98:216,21,0	1/1:0,2:2:3.01:35,3,0	1/1:0,1:1:3.01:35,3,0
chr10	91780819	.	T	TA	5278.73	PASS	AB=0.933;AC=31;AF=0.554;AN=56;BaseQRankSum=-11.798;DP=492;FS=0.000;HRun=11;HaplotypeScore=51.5680;InbreedingCoeff=0.8895;MQ=78.86;MQ0=1;MQRankSum=2.092;QD=20.78;ReadPosRankSum=3.215;VQSLOD=5.5800;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,40:46:99:1080,108,0	1/1:1,11:12:27.05:274,27,0	0/0:28,0:20:18.58:0,19,111	0/1:13,1:10:2.23:2,0,22	0/0:24,0:25:67.76:0,68,512	1/1:4,10:14:30.06:305,30,0	1/1:0,12:12:27.05:274,27,0	0/0:28,0:31:79.52:0,80,596	0/0:14,0:14:38.84:0,39,300	1/1:2,16:18:47.70:449,48,0	1/1:2,13:16:12.82:307,13,0	0/0:15,0:15:41.84:0,42,325	1/1:5,10:15:3.96:221,4,0	0/0:18,0:18:44.80:0,45,348	1/1:1,9:10:24.05:243,24,0	1/1:3,11:15:32.90:319,33,0	1/1:4,19:23:51.10:518,51,0	1/1:3,19:22:51.10:518,51,0	0/0:21,0:22:52.81:0,53,400	0/0:13,0:14:37.89:0,38,283	0/0:12,0:12:23.86:0,24,181	1/1:0,5:5:14.99:141,15,0	1/1:2,6:9:0.66:174,1,0	1/1:3,5:9:12.02:121,12,0	1/1:3,11:14:33.07:335,33,0	0/0:22,0:22:62.74:0,63,484	0/0:23,0:22:56.63:0,57,429	0/0:14,0:14:32.82:0,33,255
chr10	91781276	.	TTTTTTGTTTGTTTTG	T	3657.85	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.114;DP=485;FS=2.211;HRun=0;HaplotypeScore=173.5015;InbreedingCoeff=0.9711;MQ=68.73;MQ0=6;MQRankSum=-8.336;QD=47.50;ReadPosRankSum=0.625;VQSLOD=3.5709;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,25:36:20.96:785,21,0	1/1:1,5:6:14.98:527,15,0	0/0:42,0:16:24.55:0,25,758	0/0:35,0:16:31.40:0,31,928	0/0:17,0:17:45.15:0,45,2448	0/0:18,0:18:54.17:0,54,3049	0/0:8,0:8:24.08:0,24,1524	0/0:26,0:26:63.22:0,63,2922	0/0:9,0:9:15.05:0,15,917	0/0:14,0:14:42.14:0,42,2401	0/0:14,0:14:39.12:0,39,2433	0/0:14,0:14:33.11:0,33,2120	0/0:9,0:9:27.09:0,27,1765	0/0:14,0:14:39.12:0,39,2081	1/1:4,12:16:27.09:1074,27,0	0/0:11,0:11:30.10:0,30,2023	1/1:12,7:19:48.09:1272,48,0	0/0:25,0:25:69.24:0,69,4114	0/0:25,0:25:63.20:0,63,3487	0/0:20,0:20:48.16:0,48,2725	0/0:10,0:10:30.10:0,30,2054	0/0:3,0:3:9.03:0,9,651	0/0:11,0:11:27.09:0,27,1810	0/0:16,0:16:45.15:0,45,2590	0/0:11,0:11:27.07:0,27,1450	0/0:19,0:19:45.13:0,45,2682	0/0:27,0:27:69.24:0,69,4235	0/0:9,0:9:27.09:0,27,1279
chr10	91781389	.	GT	G	1253.70	PASS	AB=0.889;AC=30;AF=0.536;AN=56;BaseQRankSum=3.360;DP=451;FS=2.833;HRun=15;HaplotypeScore=64.5106;InbreedingCoeff=0.5367;MQ=81.17;MQ0=5;MQRankSum=0.071;QD=4.84;ReadPosRankSum=2.400;VQSLOD=1.9708;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,1:22:25.10:83,25,0	1/1:4,0:9:10.64:30,11,0	0/0:40,0:18:16.03:0,16,150	0/0:41,0:23:23.02:0,23,155	0/0:24,1:27:36.75:0,37,452	0/0:10,0:11:19.30:0,19,167	0/0:7,0:7:9:0,9,79	0/1:18,2:22:47.33:47,0,90	0/0:9,0:10:22.65:0,23,176	1/1:5,10:16:13.76:202,14,0	1/1:4,11:16:30.65:183,31,0	0/1:8,0:8:5.04:5,0,69	1/1:5,2:7:14.78:95,15,0	0/1:10,2:14:5.25:5,0,186	1/1:7,0:12:11.07:43,11,0	0/0:8,1:9:1.72:0,2,135	1/1:8,1:29:32.98:105,33,0	1/1:11,11:23:31.56:198,32,0	0/1:15,4:19:31.55:32,0,229	0/0:20,2:24:17.86:0,18,258	0/0:4,0:4:9.06:0,9,60	1/1:3,3:6:8.85:58,9,0	1/1:2,3:5:7.77:36,8,0	1/1:4,7:11:17.72:115,18,0	1/1:3,10:13:26.57:173,27,0	0/0:18,0:17:17.98:0,18,151	0/1:14,4:17:40.98:41,0,185	0/1:7,1:8:4.27:4,0,91
chr10	91781690	.	CTT	C	6076.58	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-13.836;DP=504;FS=6.992;HRun=13;HaplotypeScore=73.0344;InbreedingCoeff=0.9497;MQ=69.71;MQ0=1;MQRankSum=0.103;QD=21.86;ReadPosRankSum=2.225;VQSLOD=4.4821;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:63.10:611,63,0	1/1:0,6:7:8.92:137,9,0	0/0:16,0:13:16.85:0,17,116	0/0:13,0:11:8.04:0,8,94	1/1:4,22:27:56.85:543,57,0	0/0:1,0:18:34.93:0,35,120	0/0:3,0:18:24.57:0,25,105	1/1:2,22:24:66.09:640,66,0	1/1:0,7:7:21.03:204,21,0	0/0:8,1:24:18.32:0,18,180	0/0:3,0:13:19.81:0,20,79	1/1:2,14:16:33.04:320,33,0	0/0:4,1:19:9.31:0,9,102	1/1:1,17:18:42.07:407,42,0	1/1:0,24:24:60.10:582,60,0	0/0:3,0:18:32.31:0,32,111	1/1:5,24:30:53.93:573,54,0	0/0:3,0:19:32.44:0,32,112	1/1:7,15:22:45.03:436,45,0	1/1:5,10:15:23.95:233,24,0	1/1:4,11:16:20.74:186,21,0	0/0:2,0:8:4.91:0,5,27	0/0:3,0:18:24.95:0,25,86	0/0:3,1:25:16.33:0,16,117	0/0:0,0:17:37.43:0,37,128	1/1:0,16:17:48.06:465,48,0	1/1:2,18:20:53.81:507,54,0	1/1:0,8:8:24.04:233,24,0
chr10	91782577	.	GGC	G	405.18	PASS	AB=0.966;AC=14;AF=0.250;AN=56;BaseQRankSum=-3.742;DP=377;FS=3.330;HRun=0;HaplotypeScore=80.9815;InbreedingCoeff=0.1821;MQ=66.89;MQ0=1;MQRankSum=0.184;QD=2.96;ReadPosRankSum=0.794;VQSLOD=1.9768;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:11.85:0,12,61	0/0:7,0:7:14.75:0,15,61	0/0:10,0:7:8.34:0,8,56	0/0:4,0:2:5.35:0,5,29	0/0:24,0:24:29.24:0,29,142	0/1:19,0:18:51.21:51,0,56	0/1:11,0:11:21.93:22,0,26	0/0:17,0:17:22.29:0,22,149	0/0:12,0:12:0.01:0,0,44	0/1:20,1:21:50.01:62,0,50	0/1:20,0:20:18.37:106,0,18	0/0:8,0:8:10.15:0,10,36	0/1:19,2:21:11.71:111,0,12	0/0:11,0:11:19.48:0,19,86	0/0:15,0:15:23.46:0,23,109	0/1:7,0:7:11.32:30,0,11	0/0:15,0:15:26.40:0,26,107	0/1:5,1:6:3.46:82,0,3	0/0:10,0:10:11.29:0,11,69	0/0:13,0:13:14.22:0,14,62	0/0:23,0:23:28.44:0,28,106	0/1:10,0:10:8.05:8,0,22	1/1:4,0:4:3.74:13,4,0	1/1:9,0:9:16.48:45,16,0	1/1:9,0:8:9.05:34,9,0	0/0:18,0:18:23.86:0,24,166	0/0:19,0:19:31.47:0,31,131	0/0:20,0:20:39.82:0,40,187
chr10	91782579	.	CGGG	C	6294.39	PASS	AB=0.632;AC=35;AF=0.625;AN=56;BaseQRankSum=-12.704;DP=385;FS=9.465;HRun=12;HaplotypeScore=71.1169;InbreedingCoeff=0.5536;MQ=67.05;MQ0=1;MQRankSum=-3.464;QD=21.48;ReadPosRankSum=1.778;VQSLOD=2.9378;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:12:24.06:300,24,0	1/1:2,4:7:14.98:170,15,0	0/1:11,0:8:12.16:12,0,92	0/0:4,0:2:3.01:0,3,34	1/1:2,21:23:54.07:658,54,0	0/1:4,2:19:11.29:52,0,11	0/0:2,0:11:9.97:0,10,21	1/1:7,13:20:29.92:352,30,0	1/1:1,11:12:30.09:373,30,0	0/0:5,0:22:24.03:0,24,60	0/0:4,0:22:19.94:0,20,43	1/1:1,8:9:4.16:277,4,0	0/1:5,1:23:16.31:16,0,37	1/1:1,10:11:30.09:373,30,0	1/1:2,12:14:30.06:370,30,0	0/1:1,1:7:4.10:26,0,4	1/1:2,13:15:33.09:417,33,0	0/0:2,0:6:6.54:0,7,15	1/1:3,7:10:21.03:249,21,0	1/1:0,14:14:36.09:445,36,0	1/1:0,23:23:42.13:531,42,0	0/0:3,0:10:4.98:0,5,11	0/1:0,1:4:1.28:31,0,1	0/0:0,0:10:9.97:0,10,21	0/0:0,0:6:4.98:0,5,11	1/1:4,14:18:45.08:548,45,0	1/1:3,17:20:42.12:528,42,0	1/1:5,16:21:45.13:566,45,0
chr10	91784569	.	AC	A	10367.88	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-2.240;DP=497;FS=6.377;HRun=8;HaplotypeScore=48.8912;InbreedingCoeff=0.6751;MQ=61.25;MQ0=10;MQRankSum=0.024;QD=21.42;ReadPosRankSum=4.162;VQSLOD=4.9167;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:27:60.06:567,60,0	1/1:0,11:11:29.92:289,30,0	0/1:18,0:10:5.29:5,0,208	0/0:13,0:6:8.98:0,9,83	1/1:2,16:18:45.07:434,45,0	1/1:1,27:27:72.11:691,72,0	1/1:4,10:14:18.03:174,18,0	1/1:12,18:29:41.80:411,42,0	1/1:1,15:16:42.07:405,42,0	1/1:2,18:20:54.08:520,54,0	1/1:1,20:21:60.03:568,60,0	1/1:1,16:17:39.06:377,39,0	1/1:1,18:19:51.07:488,51,0	1/1:0,16:16:36.06:348,36,0	1/1:3,9:11:18.03:174,18,0	1/1:0,4:4:12.02:116,12,0	1/1:3,17:19:45.07:434,45,0	1/1:1,29:29:69.11:666,69,0	1/1:4,21:24:57.05:539,57,0	1/1:0,16:16:36.05:343,36,0	1/1:1,13:13:39.01:367,39,0	1/1:1,13:13:33.05:318,33,0	1/1:3,14:15:39.01:366,39,0	1/1:3,8:12:23.07:209,23,0	1/1:0,11:11:27.04:260,27,0	1/1:3,22:24:62.96:576,63,0	1/1:0,19:19:48.08:463,48,0	1/1:1,9:9:27.04:261,27,0
chr10	91786621	.	AACTTT	A	6583.40	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=10.531;DP=405;FS=16.343;HRun=0;HaplotypeScore=81.2276;InbreedingCoeff=0.8572;MQ=72.96;MQ0=1;MQRankSum=-2.305;QD=44.48;ReadPosRankSum=1.866;VQSLOD=3.8571;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.18:0,51,1526	0/0:1,0:1:3.01:0,3,92	0/0:8,0:7:12.04:0,12,282	0/1:10,0:10:31.18:31,0,75	0/0:13,0:13:39.13:0,39,1190	1/1:1,15:16:39.13:793,39,0	1/1:2,13:15:27.09:544,27,0	0/0:36,0:36:93.32:0,93,2760	0/0:15,1:16:39.13:0,39,1189	1/1:2,25:27:75.23:1480,75,0	1/1:1,12:13:30.10:594,30,0	0/0:16,0:16:45.15:0,45,1380	1/1:1,20:21:51.17:1042,51,0	0/0:14,0:14:42.14:0,42,1260	0/0:21,0:21:60.21:0,60,1835	1/1:1,12:13:33.11:684,33,0	0/0:31,0:31:90.28:0,90,2689	1/1:0,12:12:30.10:622,30,0	0/0:10,0:10:30.10:0,30,923	0/0:10,0:10:24.08:0,24,731	0/0:9,0:9:24.08:0,24,738	1/1:0,2:2:6.02:124,6,0	1/1:0,3:3:6.02:124,6,0	1/1:0,6:6:9.03:187,9,0	1/1:1,9:10:18.06:358,18,0	0/0:23,0:23:60.21:0,60,1791	0/0:21,0:21:60.21:0,60,1835	0/0:11,0:11:33.11:0,33,951
chr10	91787697	.	TTTTTG	T	14219.84	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-1.507;DP=606;FS=8.672;HRun=0;HaplotypeScore=126.0423;InbreedingCoeff=0.4743;MQ=65.29;MQ0=3;MQRankSum=1.245;QD=24.14;ReadPosRankSum=3.386;VQSLOD=4.2989;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:42:43.20:428,43,0	1/1:2,8:10:15.01:273,15,0	0/0:17,0:15:5.97:0,6,134	0/1:32,0:19:13.16:13,0,200	1/1:14,15:29:36.12:597,36,0	1/1:7,27:34:54.19:983,54,0	1/1:11,11:22:6.08:395,6,0	1/1:13,17:30:51.10:734,51,0	1/1:6,12:18:27.09:492,27,0	1/1:8,16:24:51.16:888,51,0	1/1:8,12:19:30.01:432,30,0	1/1:7,9:16:21.07:382,21,0	1/1:9,18:27:35.87:655,36,0	1/1:6,15:21:24.08:437,24,0	1/1:3,14:17:36.12:655,36,0	1/1:7,8:15:15.05:273,15,0	1/1:8,21:29:56.78:993,57,0	1/1:8,13:21:36.12:655,36,0	1/1:13,7:18:24.05:400,24,0	1/1:3,14:17:36.08:594,36,0	1/1:11,11:22:24.08:434,24,0	1/1:4,14:17:36.12:655,36,0	1/1:8,9:17:21.03:347,21,0	1/1:6,10:16:24.08:437,24,0	1/1:7,12:18:33:579,33,0	1/1:9,16:24:45.07:776,45,0	1/1:10,12:22:33.11:601,33,0	1/1:3,3:6:6.02:109,6,0
chr10	91787991	.	G	GA	2675.38	PASS	AB=0.836;AC=44;AF=0.786;AN=56;BaseQRankSum=-0.488;DP=434;FS=20.983;HRun=14;HaplotypeScore=92.9977;InbreedingCoeff=-0.1428;MQ=42.50;MQ0=14;MQRankSum=-2.070;QD=6.27;ReadPosRankSum=-1.731;VQSLOD=0.3917;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:20,5:24:51.10:145,0,51	1/1:2,5:7:9:77,9,0	0/0:7,0:1:0:0,0,0	0/1:17,0:2:0:0,0,0	1/1:21,8:30:13.46:198,13,0	0/1:14,9:22:38.05:191,0,38	0/1:7,5:10:2.62:111,0,3	1/1:15,4:17:2.22:98,2,0	1/1:9,2:10:11.87:84,12,0	1/1:14,4:19:0.02:115,0,0	0/1:10,4:14:7.28:64,0,7	1/1:7,4:12:15.34:99,15,0	0/1:8,0:9:0.73:21,0,1	1/1:13,4:16:2.65:103,3,0	0/1:11,5:16:0.77:109,0,1	1/1:4,4:8:11.95:98,12,0	1/1:16,6:22:1.74:139,2,0	0/1:7,4:10:18.33:82,0,18	1/1:10,3:13:13.11:117,13,0	1/1:12,5:17:4.56:142,5,0	1/1:5,1:7:5.99:50,6,0	1/1:3,5:7:6:53,6,0	1/1:8,4:12:8.95:72,9,0	0/1:8,0:8:13.25:13,0,13	1/1:11,8:19:0.83:147,1,0	1/1:15,8:22:13.22:207,13,0	1/1:17,7:22:23.83:195,24,0	0/1:9,2:10:4.60:63,0,5
chr10	91788010	.	CAA	C	4439.54	PASS	AB=0.600;AC=31;AF=0.554;AN=56;BaseQRankSum=-5.886;DP=452;FS=1.980;HRun=11;HaplotypeScore=79.7879;InbreedingCoeff=0.8802;MQ=55.18;MQ0=9;MQRankSum=-0.651;QD=19.56;ReadPosRankSum=4.949;VQSLOD=4.1627;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,15:20:37.03:440,37,0	1/1:2,6:8:17.77:190,18,0	0/0:23,0:12:24.27:0,24,181	0/0:28,0:7:8.68:0,9,99	0/0:10,0:30:44.70:0,45,160	1/1:8,12:20:41.83:423,42,0	1/1:4,7:11:23.88:241,24,0	0/0:6,0:26:28.99:0,29,160	0/0:2,0:8:12.48:0,12,43	1/1:4,18:22:51.15:554,51,0	1/1:1,16:16:42.11:446,42,0	0/0:10,0:13:19.51:0,20,87	1/1:4,2:6:12.03:126,12,0	0/0:4,0:10:20.19:0,20,79	1/1:1,12:13:30.08:319,30,0	1/1:3,4:7:9.01:96,9,0	1/1:5,16:20:6.24:374,6,0	1/1:4,9:14:26.60:253,27,0	0/0:7,1:23:10.91:0,11,133	0/1:6,1:18:1:1,0,75	0/0:2,0:5:5.94:0,6,23	1/1:3,4:6:12.02:125,12,0	1/1:3,6:9:11.98:182,12,0	1/1:1,5:6:15.04:160,15,0	1/1:4,21:24:48.10:511,48,0	0/0:8,0:16:26.41:0,26,146	0/0:9,0:23:35.45:0,35,158	0/0:3,0:5:9.98:0,10,34
chr10	91788020	.	AAT	A	1333.67	PASS	AB=0.944;AC=24;AF=0.429;AN=56;BaseQRankSum=6.346;DP=436;FS=2.985;HRun=0;HaplotypeScore=82.8125;InbreedingCoeff=0.3571;MQ=60.65;MQ0=7;MQRankSum=-5.435;QD=6.44;ReadPosRankSum=6.389;VQSLOD=2.0920;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:22:3.57:135,4,0	1/1:6,1:7:15.41:84,15,0	0/0:25,0:14:20.88:0,21,242	0/0:29,0:7:14.98:0,15,167	0/0:27,0:27:5.18:0,5,175	1/1:14,2:15:30.15:167,30,0	1/1:9,0:9:21.85:130,22,0	0/0:31,0:27:73.88:0,74,410	0/0:10,0:9:19.57:0,20,105	0/1:22,0:22:37.56:94,0,38	0/1:19,0:18:29.05:130,0,29	0/0:11,0:11:11.93:0,12,109	0/1:4,2:6:9.68:75,0,10	0/0:9,0:8:16.38:0,16,66	1/1:13,0:13:25.35:121,25,0	0/1:6,0:6:14.32:25,0,14	0/1:23,0:22:25:144,0,25	1/1:11,1:12:4.97:109,5,0	0/0:25,0:24:19.95:0,20,250	0/0:18,0:18:25.86:0,26,208	0/1:6,0:6:2.48:2,0,68	0/1:6,2:7:45.35:73,0,45	1/1:7,0:7:5.68:61,6,0	1/1:5,0:5:13.31:62,13,0	0/1:25,0:24:23.75:113,0,24	0/0:17,0:16:40.10:0,40,281	0/0:21,0:19:40.35:0,40,228	0/0:6,0:5:14.08:0,14,73
chr10	91794445	.	A	ATG	8766.79	PASS	AB=0.848;AC=25;AF=0.446;AN=56;BaseQRankSum=-14.025;DP=696;FS=0.331;HRun=0;HaplotypeScore=85.8256;InbreedingCoeff=0.8001;MQ=66.19;MQ0=8;MQRankSum=0.399;QD=25.26;ReadPosRankSum=3.149;VQSLOD=5.5930;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:18.15:0,18,818	0/0:14,0:14:33.09:0,33,389	0/1:32,0:19:1.35:1,0,142	0/0:28,0:23:14.47:0,14,160	0/0:14,0:16:32.93:0,33,378	1/1:11,22:32:63.21:1016,63,0	1/1:4,16:20:33.11:532,33,0	0/0:26,0:26:54.10:0,54,588	0/0:28,0:28:61.19:0,61,846	1/1:8,25:32:34.76:966,35,0	1/1:6,17:23:18.96:734,19,0	0/0:28,0:28:64.41:0,64,774	1/1:4,18:22:39.13:629,39,0	0/1:6,13:19:42.74:357,0,43	0/0:29,0:29:81.22:0,81,952	1/1:4,20:26:51.10:810,51,0	0/0:27,0:27:66.14:0,66,760	1/1:1,7:7:18.06:290,18,0	0/0:20,0:21:44.92:0,45,488	0/0:31,0:32:93.04:0,93,1054	0/0:34,0:36:84:0,84,921	1/1:2,20:23:42.74:820,43,0	1/1:8,25:34:57.16:897,57,0	1/1:7,24:31:20.84:835,21,0	1/1:2,22:24:54.18:871,54,0	0/1:18,1:19:9.29:9,0,375	0/0:27,0:27:75.21:0,75,896	0/0:2,0:2:6.02:0,6,73
chr10	91795174	.	GCACA	G	991.02	PASS	AB=1.000;AC=23;AF=0.479;AN=48;BaseQRankSum=-4.292;DP=458;FS=4.265;HRun=0;HaplotypeScore=87.3413;InbreedingCoeff=0.6725;MQ=62.55;MQ0=12;MQRankSum=1.143;QD=5.63;ReadPosRankSum=1.691;VQSLOD=1.3956;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:29:25.66:26,0,107	0/0:2,0:2:3.01:0,3,56	./.	./.	0/0:15,0:15:21.01:0,21,235	1/1:10,5:14:3.01:46,3,0	1/1:17,1:21:12.03:161,12,0	0/0:24,0:24:16.69:0,17,109	0/0:18,0:18:6.02:0,6,100	1/1:4,2:6:3.01:46,3,0	1/1:6,0:6:5.21:32,5,0	0/0:13,0:26:8.95:0,9,94	1/1:3,1:5:5.74:80,6,0	1/1:11,7:17:5.99:68,6,0	0/0:12,0:12:12.04:0,12,193	1/1:4,6:10:11.93:155,12,0	0/0:26,0:26:20.66:0,21,323	1/1:12,8:23:12.77:209,13,0	0/0:18,0:18:9.03:0,9,127	0/0:17,0:17:13.09:0,13,136	0/0:40,0:37:36.01:0,36,404	./.	1/1:9,0:10:8.77:61,9,0	1/1:12,8:21:12.03:165,12,0	1/1:4,5:10:9.02:120,9,0	0/0:14,0:14:15:0,15,158	0/0:21,0:21:5.58:0,6,86	./.
chr10	91795201	.	C	CACACACAT	2746.98	PASS	AB=0.885;AC=15;AF=0.278;AN=54;BaseQRankSum=-2.989;DP=501;FS=9.965;HRun=0;HaplotypeScore=121.1870;InbreedingCoeff=0.6376;MQ=51.25;MQ0=20;MQRankSum=1.386;QD=13.08;ReadPosRankSum=0.247;VQSLOD=1.4150;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:27:41.67:0,42,357	0/0:3,0:3:5.80:0,6,105	0/0:23,0:6:14.67:0,15,94	0/0:17,0:7:11.18:0,11,155	1/1:19,0:20:23.94:492,24,0	0/0:18,0:16:29.93:0,30,274	0/0:20,0:19:35.92:0,36,432	1/1:31,0:31:6.96:382,7,0	1/1:3,14:17:2.33:258,2,0	0/0:17,0:16:47.96:0,48,460	0/0:9,0:9:14.14:0,14,145	1/1:25,0:27:26.08:319,26,0	0/0:11,0:11:29.46:0,29,278	0/0:18,0:17:23.98:0,24,238	0/0:19,0:19:11.74:0,12,227	0/0:10,0:10:18.02:0,18,260	0/0:27,0:28:23.20:0,23,388	0/0:19,0:19:30.36:0,30,412	0/1:24,0:24:52.13:203,0,52	0/1:19,0:19:8.67:241,0,9	1/1:35,0:32:9.69:593,10,0	0/0:6,0:5:8.98:0,9,72	0/0:11,0:11:20.98:0,21,206	0/0:18,0:18:23.55:0,24,337	0/0:14,0:14:27.01:0,27,335	1/1:14,0:14:8.27:358,8,0	0/1:10,0:21:4.49:75,0,4	./.
chr10	91795203	.	C	CACAT	411.04	PASS	AB=0.956;AC=8;AF=0.148;AN=54;BaseQRankSum=3.313;DP=503;FS=0.635;HRun=0;HaplotypeScore=96.6156;InbreedingCoeff=-0.1770;MQ=51.23;MQ0=21;MQRankSum=-0.843;QD=2.21;ReadPosRankSum=4.050;VQSLOD=1.5726;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:28:19.01:0,19,284	0/0:3,0:3:5.74:0,6,81	0/0:24,0:6:16.09:0,16,110	0/0:17,0:7:11.18:0,11,138	0/1:20,0:20:36.91:37,0,155	0/0:18,0:16:32.93:0,33,274	0/0:19,0:18:41.84:0,42,368	0/1:31,0:30:6.45:6,0,314	0/1:18,0:17:19.34:85,0,19	0/0:17,0:16:47.97:0,48,437	0/0:10,0:10:17.57:0,18,172	0/1:27,0:27:19.38:19,0,101	0/0:12,0:12:29.81:0,30,240	0/0:17,0:16:26.96:0,27,233	0/0:20,0:20:11.60:0,12,135	0/0:10,0:10:21.01:0,21,205	0/0:25,0:26:28.18:0,28,250	0/0:21,0:21:33.68:0,34,306	0/0:24,0:24:19.39:0,19,309	0/1:11,5:20:85.46:106,0,85	0/1:36,0:32:99:160,0,148	0/0:5,0:4:8.98:0,9,72	0/0:11,0:11:23.97:0,24,206	0/0:18,0:18:26.97:0,27,259	0/0:14,0:14:29.99:0,30,276	0/1:13,0:13:88.94:89,0,130	0/1:20,0:21:19.40:40,0,19	./.
chr10	91795204	.	A	ACC	484.04	PASS	AB=0.699;AC=3;AF=0.056;AN=54;BaseQRankSum=0.943;DP=501;FS=2.465;HRun=1;HaplotypeScore=82.3096;InbreedingCoeff=0.0366;MQ=51.21;MQ0=20;MQRankSum=1.157;QD=6.45;ReadPosRankSum=2.526;VQSLOD=0.2433;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,1:27:17.69:313,0,18	0/0:3,0:3:4.73:0,5,18	0/0:24,0:6:17.87:0,18,138	0/0:19,0:7:11.18:0,11,137	0/0:20,0:20:31.47:0,31,298	0/0:17,0:15:32.95:0,33,271	0/0:19,0:18:41.77:0,42,321	0/0:30,0:29:83.02:0,83,611	0/0:17,0:16:0.11:0,0,55	0/0:17,0:16:47.98:0,48,429	0/0:10,0:10:17.48:0,17,165	0/0:28,0:28:14.54:0,15,178	0/0:12,0:12:29.72:0,30,220	0/0:17,0:16:26.60:0,27,201	0/1:2,18:20:5.64:105,0,6	0/0:10,0:10:20.95:0,21,167	0/1:9,17:26:44.71:165,0,45	0/0:21,0:21:34.02:0,34,246	0/0:25,0:25:60.47:0,60,519	0/0:20,0:20:21.05:0,21,154	0/0:35,0:31:27.60:0,28,315	0/0:5,0:4:8.95:0,9,69	0/0:11,0:11:23.95:0,24,196	0/0:18,0:18:26.76:0,27,201	0/0:14,0:14:29.93:0,30,243	0/0:13,0:13:30.25:0,30,238	0/0:21,0:21:19.53:0,20,128	./.
chr10	91795342	.	T	TTTC	4873.34	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=-5.762;DP=464;FS=7.194;HRun=0;HaplotypeScore=84.0002;InbreedingCoeff=0.7422;MQ=64.83;MQ0=0;MQRankSum=0.496;QD=20.05;ReadPosRankSum=2.510;VQSLOD=3.8659;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:1.73:2,0,134	0/0:8,0:8:1.11:0,1,62	0/0:9,0:5:8.11:0,8,104	0/0:11,0:8:3.58:0,4,114	1/1:5,17:23:41.80:503,42,0	0/0:16,0:16:42.05:0,42,551	0/0:15,0:15:37.59:0,38,426	1/1:12,22:36:70.42:899,70,0	1/1:7,6:13:24.02:391,24,0	0/0:24,0:23:57.07:0,57,636	0/0:14,0:14:40.24:0,40,471	1/1:3,6:10:11.99:153,12,0	0/0:10,0:10:23.87:0,24,284	0/0:15,0:15:35.97:0,36,365	0/0:17,0:17:3.92:0,4,125	0/0:10,0:10:27.52:0,28,398	0/1:21,0:20:67.24:67,0,69	0/0:15,0:15:35.94:0,36,410	1/1:7,16:23:53.33:724,53,0	1/1:5,18:22:53.71:695,54,0	1/1:5,9:14:8.65:91,9,0	0/0:16,0:15:18.71:0,19,391	0/0:7,0:6:14.97:0,15,170	0/0:10,0:10:24.49:0,24,281	0/0:24,0:24:64.61:0,65,750	1/1:7,15:23:3.26:698,3,0	1/1:9,12:26:11.05:424,11,0	1/1:1,6:8:11.97:227,12,0
chr10	91795343	.	T	TTC	2941.05	PASS	AB=0.973;AC=17;AF=0.304;AN=56;BaseQRankSum=-0.149;DP=460;FS=0.000;HRun=0;HaplotypeScore=77.1239;InbreedingCoeff=0.7124;MQ=65.78;MQ0=0;MQRankSum=1.154;QD=14.93;ReadPosRankSum=4.182;VQSLOD=3.1650;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:29.56:0,30,200	0/0:7,0:7:13.51:0,14,99	0/0:10,0:6:8.12:0,8,98	0/0:11,0:8:3.61:0,4,110	1/1:20,1:21:11.94:297,12,0	0/0:16,0:16:42.02:0,42,506	0/0:15,0:15:43.79:0,44,443	1/1:31,2:32:33.68:587,34,0	1/1:11,2:12:8.97:267,9,0	0/0:24,0:23:63.05:0,63,656	0/0:15,0:15:40.49:0,40,457	1/1:8,1:9:10.93:93,11,0	0/0:10,0:10:26.88:0,27,296	0/0:15,0:15:41.94:0,42,396	0/0:16,0:16:17.74:0,18,142	0/0:10,0:10:27.88:0,28,362	0/0:21,0:20:6.90:0,7,85	0/0:16,0:16:38.92:0,39,421	1/1:22,2:24:51.20:562,51,0	1/1:25,0:23:31.12:501,31,0	1/1:13,0:13:7.76:82,8,0	0/0:16,0:15:38.63:0,39,413	0/0:7,0:6:14.92:0,15,155	0/0:10,0:10:25.26:0,25,262	0/0:24,0:24:62.69:0,63,734	0/1:21,1:22:2.96:428,0,3	0/1:24,1:25:10.79:208,0,11	0/1:12,0:11:6.55:107,0,7
chr10	91795922	.	GCATC	G	15180.35	PASS	AB=0.917;AC=33;AF=0.589;AN=56;BaseQRankSum=17.153;DP=609;FS=2.146;HRun=0;HaplotypeScore=102.8926;InbreedingCoeff=0.9227;MQ=74.65;MQ0=0;MQRankSum=-5.031;QD=44.78;ReadPosRankSum=4.923;VQSLOD=5.5543;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:39.13:740,39,0	1/1:0,7:7:14.97:267,15,0	0/0:15,0:15:45.11:0,45,1121	0/0:13,0:13:32.03:0,32,829	0/0:42,0:42:99:0,126,3324	1/1:1,37:38:99:1881,102,0	1/1:0,13:13:36.12:664,36,0	0/0:37,0:37:99:0,111,2768	0/0:21,0:21:60.21:0,60,1612	1/1:2,29:32:87.30:1638,87,0	1/1:1,18:19:54.18:985,54,0	0/0:24,0:24:72.25:0,72,1937	1/1:2,28:30:77.81:1444,78,0	1/1:0,21:21:51.17:968,51,0	1/1:1,17:18:42.14:794,42,0	1/1:1,24:25:63.22:1177,63,0	1/1:2,18:20:45.15:832,45,0	1/1:0,9:9:21.07:399,21,0	0/0:18,0:18:51.14:0,51,1212	0/0:42,0:42:99:0,123,3225	0/0:16,0:16:42.13:0,42,1077	1/1:0,16:16:45.15:837,45,0	1/1:1,18:19:48.12:854,48,0	1/1:0,14:14:36.12:684,36,0	1/1:0,19:19:51.17:965,51,0	0/1:20,2:22:50.75:51,0,1392	0/0:34,0:33:93.32:0,93,2454	0/0:8,0:8:21.07:0,21,567
chr10	91798054	.	T	TA	6791.55	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-12.382;DP=549;FS=8.298;HRun=10;HaplotypeScore=51.8192;InbreedingCoeff=0.9606;MQ=71.42;MQ0=0;MQRankSum=-1.186;QD=22.87;ReadPosRankSum=2.610;VQSLOD=5.6273;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:10:24.06:256,24,0	1/1:0,7:7:21.05:224,21,0	0/0:15,0:14:26.94:0,27,219	0/0:4,0:4:2.84:0,3,14	0/0:31,0:34:67.76:0,68,537	1/1:1,26:26:66.17:704,66,0	1/1:3,6:10:20.89:206,21,0	0/0:28,0:28:80.89:0,81,661	0/0:22,0:22:62.91:0,63,514	1/1:6,17:23:48.12:511,48,0	1/1:6,28:34:81.20:862,81,0	0/0:19,0:19:47.90:0,48,387	1/1:4,14:18:30.54:319,31,0	1/1:3,12:15:39.06:403,39,0	1/1:1,19:20:42.11:448,42,0	1/1:3,23:26:57.14:608,57,0	1/1:4,14:19:33.08:351,33,0	1/1:2,11:13:30.08:320,30,0	0/0:17,0:17:41.93:0,42,343	0/0:28,0:28:68.89:0,69,567	0/0:7,0:7:17.96:0,18,144	1/1:3,17:20:14.37:335,14,0	1/1:4,17:22:26.28:457,26,0	1/1:2,8:10:8.36:237,8,0	1/1:1,22:23:32.51:551,33,0	0/0:27,1:28:45.91:0,46,584	0/0:36,0:36:89.86:0,90,739	0/0:14,0:14:35.90:0,36,287
chr10	91798609	.	G	GA	2789.69	PASS	AB=0.747;AC=43;AF=0.768;AN=56;BaseQRankSum=1.634;DP=595;FS=2.981;HRun=14;HaplotypeScore=76.6014;InbreedingCoeff=0.4355;MQ=51.43;MQ0=20;MQRankSum=-1.383;QD=5.52;ReadPosRankSum=-1.531;VQSLOD=2.3255;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:34:50.83:0,51,292	0/0:7,0:8:12.65:0,13,69	0/1:52,0:10:23.55:24,0,40	0/1:39,1:6:4.93:5,0,7	1/1:19,4:23:8.42:159,8,0	1/1:10,0:21:17.20:97,17,0	1/1:4,0:13:5.68:28,6,0	1/1:11,14:26:15.66:316,16,0	0/1:5,14:19:1.22:113,0,1	1/1:5,1:27:38.50:220,38,0	1/1:12,0:28:17.02:97,17,0	1/1:11,3:15:32.44:228,32,0	1/1:13,0:15:0.17:27,0,0	1/1:8,0:9:8.67:44,9,0	0/0:21,0:21:26.34:0,26,204	1/1:3,0:11:17.04:85,17,0	0/0:25,0:26:20.79:0,21,282	1/1:17,0:21:12.03:64,12,0	1/1:22,11:35:4.88:396,5,0	0/1:5,10:16:3.18:191,0,3	1/1:12,1:11:3.09:104,3,0	1/1:2,0:15:14.77:83,15,0	1/1:10,0:21:20.11:97,20,0	1/1:11,0:15:14.82:68,15,0	1/1:9,0:21:19.08:91,19,0	1/1:8,6:14:28.92:220,29,0	0/1:7,16:23:8.91:175,0,9	1/1:5,3:7:1.39:24,1,0
chr10	91800430	.	T	TA	2590.13	PASS	AB=0.747;AC=21;AF=0.375;AN=56;BaseQRankSum=-5.401;DP=618;FS=0.381;HRun=14;HaplotypeScore=81.3153;InbreedingCoeff=0.4654;MQ=74.55;MQ0=1;MQRankSum=1.162;QD=8.20;ReadPosRankSum=-1.649;VQSLOD=2.5025;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:30:52.46:0,52,453	0/0:8,0:9:25.67:0,26,159	1/1:26,0:16:6.04:36,6,0	0/0:23,1:18:3.48:0,3,39	1/1:10,15:25:6.76:305,7,0	0/1:16,3:20:14.26:14,0,173	0/1:19,2:21:14.41:14,0,172	0/1:15,23:39:58.85:374,0,59	1/1:2,25:29:59.05:535,59,0	0/0:28,0:30:54.12:0,54,337	0/0:26,1:30:28.93:0,29,317	0/1:7,8:15:0.09:114,0,0	0/0:18,0:22:26.10:0,26,221	0/0:13,0:13:9.34:0,9,168	0/0:17,0:19:46.33:0,46,293	0/0:20,0:22:42.79:0,43,273	0/0:21,0:21:56.10:0,56,361	0/0:8,0:14:12.14:0,12,94	1/1:11,15:27:15.32:358,15,0	0/1:11,11:23:34.78:182,0,35	1/1:1,6:7:9:78,9,0	0/1:14,1:15:2.80:3,0,111	0/0:31,1:34:21.77:0,22,377	0/0:14,0:15:28.53:0,29,179	0/0:18,0:19:40.39:0,40,254	1/1:10,17:28:18.16:369,18,0	0/1:6,10:18:10.96:134,0,11	1/1:7,15:22:29.99:264,30,0
chr10	91803341	.	A	AT	4519.21	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=-11.612;DP=528;FS=2.651;HRun=7;HaplotypeScore=73.0285;InbreedingCoeff=0.7675;MQ=85.17;MQ0=1;MQRankSum=-1.301;QD=19.15;ReadPosRankSum=2.077;VQSLOD=4.7212;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:87.01:0,87,820	0/0:11,0:11:33.04:0,33,313	0/1:22,0:17:3.93:4,0,71	0/1:23,0:20:2.03:2,0,63	0/0:30,0:30:85.17:0,85,540	0/1:10,0:10:9.90:10,0,27	1/1:10,0:10:10.66:29,11,0	0/0:29,0:29:76.65:0,77,517	0/0:10,0:10:26.48:0,26,165	1/1:1,25:26:72.12:791,72,0	1/1:1,25:26:78.02:865,78,0	0/0:12,0:12:29.46:0,29,189	1/1:1,13:14:27.08:326,27,0	1/1:2,5:7:15.05:181,15,0	0/0:11,0:11:30.04:0,30,286	0/1:10,0:10:6.74:11,0,7	0/0:37,0:37:98.87:0,99,885	1/1:2,25:27:60.18:724,60,0	0/0:21,0:21:55.98:0,56,363	0/0:29,0:29:70.70:0,71,449	0/0:11,0:11:26.63:0,27,182	1/1:2,7:9:21.06:254,21,0	1/1:1,11:12:27:307,27,0	1/1:0,10:10:30.09:362,30,0	1/1:5,24:29:55.05:654,55,0	0/0:20,1:21:16.90:0,17,289	0/0:20,0:20:50.11:0,50,322	0/0:14,0:14:41.22:0,41,258
chr10	91803348	.	TA	T	4125.06	PASS	AB=0.857;AC=21;AF=0.375;AN=56;BaseQRankSum=-5.207;DP=514;FS=3.768;HRun=10;HaplotypeScore=73.4386;InbreedingCoeff=0.9272;MQ=83.94;MQ0=1;MQRankSum=0.398;QD=20.02;ReadPosRankSum=-0.290;VQSLOD=4.4081;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.21:0,90,972	0/0:11,0:11:30.08:0,30,331	0/0:23,0:17:25.26:0,25,175	0/0:19,0:17:22.57:0,23,161	1/1:3,29:32:80.81:685,81,0	0/0:5,0:10:23.18:0,23,145	0/0:1,0:12:20.04:0,20,110	1/1:7,25:32:74.89:628,75,0	1/1:0,9:9:26.99:234,27,0	0/0:26,0:26:57.72:0,58,410	0/0:26,0:26:74.12:0,74,519	1/1:1,11:12:26.99:234,27,0	0/0:14,0:14:29.78:0,30,217	0/0:7,0:7:20.87:0,21,154	0/0:10,0:10:27.07:0,27,298	0/1:0,1:6:8.80:9,0,54	0/0:33,2:35:35.17:0,35,831	0/0:26,0:26:59.42:0,59,418	1/1:3,18:21:53.95:462,54,0	1/1:4,24:28:68.71:566,69,0	1/1:3,7:10:17.99:156,18,0	0/0:7,0:7:20.83:0,21,149	0/0:11,0:11:23.81:0,24,170	0/0:10,0:10:29.76:0,30,212	0/0:28,0:28:64.96:0,65,485	1/1:4,18:22:26.65:423,27,0	1/1:2,18:20:44.99:390,45,0	1/1:1,13:14:38.98:338,39,0
chr10	91803960	.	T	TA	10227.80	PASS	AB=0.612;AC=50;AF=0.893;AN=56;BaseQRankSum=-7.496;DP=558;FS=0.000;HRun=11;HaplotypeScore=54.4814;InbreedingCoeff=0.4590;MQ=64.30;MQ0=1;MQRankSum=-2.220;QD=19.48;ReadPosRankSum=1.492;VQSLOD=5.7839;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,24:33:42.94:643,43,0	0/1:4,5:9:25.43:131,0,25	0/0:18,0:9:11.89:0,12,90	0/0:15,0:11:19.71:0,20,134	1/1:2,15:17:39:375,39,0	1/1:1,19:20:48.10:487,48,0	1/1:2,14:16:15.83:336,16,0	1/1:10,14:27:3.22:336,3,0	1/1:6,17:23:24.86:434,25,0	1/1:7,19:27:16.48:516,16,0	1/1:3,14:17:15.84:342,16,0	1/1:5,15:21:47.42:450,47,0	1/1:3,6:10:17.87:165,18,0	1/1:4,20:24:7.63:441,8,0	1/1:0,17:17:39.08:396,39,0	1/1:3,17:20:4.62:410,5,0	0/1:9,23:32:31.88:614,0,32	1/1:6,17:23:7.63:440,8,0	1/1:10,9:19:19.18:265,19,0	1/1:2,19:22:36.68:528,37,0	1/1:3,13:16:12.83:312,13,0	1/1:2,12:14:9.83:281,10,0	1/1:3,11:16:9.50:249,9,0	1/1:3,20:24:19.49:546,19,0	1/1:4,17:22:18:397,18,0	1/1:5,21:26:30.87:494,31,0	1/1:0,23:23:54.11:548,54,0	1/1:3,4:7:9.02:91,9,0
chr10	91804523	.	AC	A	5225.65	PASS	AB=0.979;AC=43;AF=0.768;AN=56;BaseQRankSum=2.998;DP=577;FS=10.018;HRun=10;HaplotypeScore=57.3525;InbreedingCoeff=0.8788;MQ=62.05;MQ0=19;MQRankSum=1.279;QD=13.50;ReadPosRankSum=2.353;VQSLOD=3.8611;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:25:27.72:0,28,474	0/0:4,0:4:8.98:0,9,86	0/1:91,1:22:4.32:4,0,106	0/0:106,2:22:4.56:0,5,109	1/1:5,12:17:30.87:262,31,0	1/1:5,9:14:26.98:233,27,0	1/1:2,15:17:35.99:312,36,0	1/1:10,15:25:44.90:374,45,0	1/1:2,10:12:26.87:224,27,0	1/1:3,11:14:35.99:312,36,0	1/1:2,13:16:44.88:373,45,0	1/1:0,12:12:29.99:260,30,0	1/1:2,11:13:32.99:286,33,0	1/1:1,8:9:18:156,18,0	0/0:11,0:11:27.07:0,27,297	1/1:4,7:11:20.99:182,21,0	0/0:27,2:29:23.05:0,23,678	1/1:0,11:11:32.99:286,33,0	1/1:10,8:17:23.82:191,24,0	1/1:4,10:14:26.99:233,27,0	1/1:3,11:14:32.99:286,33,0	0/0:9,0:8:20.82:0,21,207	1/1:1,7:8:14.95:123,15,0	1/1:4,8:12:20.98:182,21,0	1/1:2,7:9:20.99:182,21,0	1/1:7,10:18:34.05:269,34,0	1/1:2,15:17:32.98:285,33,0	1/1:0,10:10:24:208,24,0
chr10	91806996	.	GA	G	5692.79	PASS	AB=0.933;AC=19;AF=0.339;AN=56;BaseQRankSum=14.472;DP=689;FS=8.929;HRun=9;HaplotypeScore=69.6005;InbreedingCoeff=0.9163;MQ=81.04;MQ0=0;MQRankSum=-2.264;QD=23.62;ReadPosRankSum=5.001;VQSLOD=5.2874;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:44.47:0,44,691	0/0:10,0:10:30.09:0,30,346	0/0:31,0:31:49.62:0,50,570	0/1:13,1:13:6.41:6,0,187	0/0:23,0:24:59.99:0,60,654	0/0:23,0:23:66.15:0,66,747	0/0:28,0:28:81.24:0,81,935	0/0:47,0:47:99:0,129,1473	0/0:19,0:19:54.16:0,54,623	1/1:2,26:28:78.04:714,78,0	1/1:2,16:18:42.02:384,42,0	0/0:21,0:21:60.18:0,60,692	1/1:3,23:26:66.03:604,66,0	1/1:2,19:21:35.54:497,36,0	0/0:38,0:38:99:0,105,1204	0/0:32,0:32:87.21:0,87,965	0/0:18,0:18:48.11:0,48,525	1/1:1,22:23:66.04:604,66,0	0/0:24,0:24:29.78:0,30,584	0/0:27,0:27:78.19:0,78,864	0/0:20,0:21:56.99:0,57,628	1/1:2,27:29:81.04:741,81,0	1/1:1,22:23:66.04:604,66,0	1/1:1,26:27:78.04:714,78,0	1/1:2,30:32:90.05:824,90,0	0/0:24,2:26:5.20:0,5,541	0/0:28,0:29:87.09:0,87,983	0/0:8,0:8:24.06:0,24,268
chr10	91807875	.	CCACACACACACA	C	2130.80	PASS	AB=0.871;AC=27;AF=0.519;AN=52;BaseQRankSum=2.670;DP=534;FS=19.404;HRun=0;HaplotypeScore=170.1741;InbreedingCoeff=-0.0858;MQ=60.92;MQ0=24;MQRankSum=-0.758;QD=6.16;ReadPosRankSum=-1.634;VQSLOD=1.1337;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:98.09:130,0,98	0/1:1,1:6:6.28:44,0,6	./.	./.	0/0:7,0:8:6.01:0,6,72	0/1:17,1:17:37.58:38,0,40	1/1:18,0:18:3.57:110,4,0	0/0:25,0:22:17.35:0,17,124	0/1:17,0:19:36.27:36,0,178	0/1:14,0:14:6.54:59,0,7	0/1:12,1:13:35.73:155,0,36	0/1:8,1:15:15.20:105,0,15	1/1:9,8:17:9.03:305,9,0	0/1:9,1:9:19.11:96,0,19	1/1:20,0:21:5.89:371,6,0	1/1:11,4:16:2.62:178,3,0	1/1:15,3:19:16.20:231,16,0	0/1:14,0:12:6.04:124,0,6	0/1:24,0:22:29.06:29,0,116	0/0:6,1:12:8.95:0,9,68	0/0:41,0:38:51.04:0,51,653	0/1:11,0:10:19.98:20,0,38	1/1:4,0:4:1.55:4,2,0	0/1:30,2:33:11.99:200,0,12	1/1:13,6:18:0.80:50,1,0	0/0:18,0:18:17.96:0,18,240	0/1:7,0:14:2.61:3,0,14	0/0:10,0:9:14.57:0,15,129
chr10	91808326	.	A	AT	6030.33	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-5.386;DP=546;FS=6.791;HRun=8;HaplotypeScore=72.4919;InbreedingCoeff=0.9285;MQ=66.15;MQ0=1;MQRankSum=0.172;QD=25.66;ReadPosRankSum=-0.609;VQSLOD=5.3072;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,1091	0/0:8,0:8:21.01:0,21,192	0/0:16,0:14:26.94:0,27,236	0/1:11,0:13:10.02:10,0,131	1/1:4,26:30:50.70:806,51,0	0/0:15,0:15:36.01:0,36,329	0/0:13,0:13:39.02:0,39,357	1/1:5,29:35:84.07:939,84,0	1/1:3,15:19:20.51:472,21,0	0/0:15,0:15:32.99:0,33,302	0/0:23,0:23:54.01:0,54,490	1/1:4,14:18:39.12:450,39,0	0/0:18,0:18:45.02:0,45,411	0/0:11,0:11:30:0,30,269	0/0:21,0:21:63.03:0,63,577	0/0:17,0:17:45.01:0,45,407	0/0:23,0:23:63.03:0,63,577	0/0:23,0:23:34.38:0,34,512	1/1:7,19:26:60.16:680,60,0	1/1:3,16:19:48.11:540,48,0	1/1:4,20:24:57.17:658,57,0	0/0:9,0:9:24:0,24,216	0/0:12,0:12:29.98:0,30,263	0/0:34,0:34:78.09:0,78,748	0/0:10,0:10:30.02:0,30,275	1/1:3,19:23:35.55:645,36,0	1/1:1,15:16:36.09:416,36,0	1/1:0,12:12:36.11:415,36,0
chr10	91808917	.	G	GT	20049.28	PASS	AB=0.835;AC=54;AF=0.964;AN=56;BaseQRankSum=0.969;DP=528;FS=0.000;HRun=1;HaplotypeScore=187.4596;InbreedingCoeff=-0.0383;MQ=57.80;MQ0=0;MQRankSum=-4.118;QD=37.97;ReadPosRankSum=2.557;VQSLOD=4.3620;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:18:35.82:468,36,0	1/1:0,6:6:18.06:269,18,0	0/1:7,3:10:49.84:139,0,50	0/1:8,1:8:46.60:62,0,47	1/1:3,27:30:75.12:1047,75,0	1/1:5,24:29:84.16:1176,84,0	1/1:3,17:20:54.14:777,54,0	1/1:7,15:22:57.16:824,57,0	1/1:4,13:17:48.13:684,48,0	1/1:8,20:28:75.21:1072,75,0	1/1:1,18:19:57.11:802,57,0	1/1:4,19:23:63.14:894,63,0	1/1:1,23:25:75.22:1088,75,0	1/1:3,17:20:57.18:826,57,0	1/1:5,25:30:87.20:1228,87,0	1/1:3,23:26:75.18:1072,75,0	1/1:2,9:11:27.09:404,27,0	1/1:1,8:9:27.05:379,27,0	1/1:3,16:19:57.19:849,57,0	1/1:5,10:15:36.04:484,36,0	1/1:3,9:12:17.97:219,18,0	1/1:3,17:20:60.11:829,60,0	1/1:0,18:18:54.10:758,54,0	1/1:2,9:11:30.02:403,30,0	1/1:3,14:17:48.13:677,48,0	1/1:2,17:19:54.15:784,54,0	1/1:3,36:39:99:1615,108,0	1/1:1,5:6:15.05:220,15,0
chr10	91808927	.	T	TA	20866.70	PASS	AB=0.767;AC=54;AF=0.964;AN=56;BaseQRankSum=-0.386;DP=522;FS=0.000;HRun=1;HaplotypeScore=201.4868;InbreedingCoeff=-0.0323;MQ=47.33;MQ0=0;MQRankSum=-1.844;QD=39.97;ReadPosRankSum=1.556;VQSLOD=4.2963;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:18:36.08:513,36,0	1/1:0,7:7:21.07:314,21,0	0/1:4,3:7:6.56:164,0,7	0/1:4,1:4:5.84:58,0,6	1/1:0,28:28:81.27:1209,81,0	1/1:1,25:26:75.25:1122,75,0	1/1:2,20:22:63.17:910,63,0	1/1:3,18:21:63.19:900,63,0	1/1:0,16:16:48.16:708,48,0	1/1:7,18:25:75.16:1034,75,0	1/1:0,19:19:54.14:782,54,0	1/1:1,20:21:60.16:872,60,0	1/1:3,21:24:69.23:1022,69,0	1/1:1,18:19:57.16:828,57,0	1/1:4,27:31:87.28:1263,87,0	1/1:2,25:27:81.24:1170,81,0	1/1:1,10:11:27.05:379,27,0	1/1:2,8:10:27.09:404,27,0	1/1:7,15:22:57.15:806,57,0	1/1:4,15:19:57.02:743,57,0	1/1:3,9:12:23.99:299,24,0	1/1:2,14:16:45.11:638,45,0	1/1:1,17:18:51.17:751,51,0	1/1:0,10:10:19.63:297,20,0	1/1:1,17:18:54.14:772,54,0	1/1:1,24:25:75.21:1091,75,0	1/1:5,35:40:99:1681,117,0	1/1:1,4:5:9.03:135,9,0
chr10	91808978	.	C	CT	17955.68	PASS	AB=0.772;AC=54;AF=0.964;AN=56;BaseQRankSum=-3.292;DP=490;FS=5.703;HRun=1;HaplotypeScore=145.8800;InbreedingCoeff=-0.0393;MQ=65.60;MQ0=0;MQRankSum=-2.858;QD=36.64;ReadPosRankSum=3.463;VQSLOD=4.2293;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:54.13:751,54,0	1/1:0,7:7:21.07:314,21,0	0/1:15,12:22:73.32:471,0,73	0/1:19,4:19:50.68:232,0,51	1/1:4,14:18:42.14:605,42,0	1/1:2,26:27:78.26:1158,78,0	1/1:2,13:15:39.09:549,39,0	1/1:2,19:21:60.15:865,60,0	1/1:1,12:13:33.11:483,33,0	1/1:2,26:28:84.27:1230,84,0	1/1:2,9:11:24.03:301,24,0	1/1:2,15:17:42.14:627,42,0	1/1:1,16:17:48.12:692,48,0	1/1:2,21:23:66.22:963,66,0	1/1:0,19:19:57.19:831,57,0	1/1:1,19:20:51.13:736,51,0	1/1:0,11:11:30.10:437,30,0	1/1:2,9:11:24.08:357,24,0	1/1:1,25:26:75.25:1113,75,0	1/1:1,18:19:54.18:806,54,0	1/1:0,5:5:15.01:199,15,0	1/1:0,9:9:27.09:394,27,0	1/1:0,17:17:48.16:717,48,0	1/1:1,8:9:21.03:289,21,0	1/1:2,19:21:52.73:766,53,0	1/1:1,17:18:54.16:784,54,0	1/1:5,25:30:78.18:1108,78,0	1/1:0,6:6:12.04:179,12,0
chr10	91810165	.	CACTACTTACAGT	C	18973.73	PASS	AB=0.508;AC=19;AF=0.339;AN=56;BaseQRankSum=18.714;DP=645;FS=5.401;HRun=0;HaplotypeScore=227.2376;InbreedingCoeff=0.9142;MQ=76.59;MQ0=0;MQRankSum=-15.604;QD=79.39;ReadPosRankSum=0.570;VQSLOD=4.4017;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.20:0,69,4047	0/0:20,0:20:60.19:0,60,3538	0/0:15,0:15:43.03:0,43,2459	0/0:17,0:17:42.09:0,42,1726	1/1:0,33:34:72.06:2344,72,0	0/0:37,0:36:99:0,111,6794	0/0:33,0:33:99:0,99,5984	1/1:0,26:26:74.94:1816,75,0	1/1:0,24:24:54.19:2121,54,0	0/0:22,0:22:66.22:0,66,3973	0/0:22,0:22:66.19:0,66,3453	1/1:0,27:27:50.85:2016,51,0	0/0:28,0:28:84.25:0,84,4586	0/0:19,0:19:57.17:0,57,3174	0/0:28,0:28:84.27:0,84,4938	0/0:18,0:18:54.19:0,54,3096	0/0:18,0:18:54.17:0,54,3129	0/0:15,0:15:45.10:0,45,2593	1/1:0,15:15:45.09:1276,45,0	1/1:0,31:31:81.23:3021,81,0	1/1:0,20:20:11.99:343,12,0	0/0:29,0:29:87.28:0,87,5255	0/0:22,0:22:66.23:0,66,4196	0/0:18,0:18:54.19:0,54,3436	0/0:21,0:21:63.19:0,63,3487	0/1:1,30:31:97.86:2861,0,98	1/1:0,24:25:63.22:2465,63,0	1/1:0,6:6:18.06:712,18,0
chr10	91811192	.	G	GAAA	7765.05	PASS	AB=0.619;AC=49;AF=0.907;AN=54;BaseQRankSum=-5.384;DP=599;FS=33.752;HRun=13;HaplotypeScore=106.6836;InbreedingCoeff=0.7844;MQ=68.93;MQ0=4;MQRankSum=-1.386;QD=14.71;ReadPosRankSum=2.183;VQSLOD=1.1835;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,26:37:25.59:371,26,0	1/1:8,3:12:30.05:355,30,0	0/0:39,0:25:18.32:0,18,226	0/0:30,0:18:23.39:0,23,199	1/1:19,10:33:50.25:532,50,0	1/1:9,11:23:54.88:745,55,0	1/1:6,9:15:18.02:260,18,0	1/1:25,1:24:28.40:213,28,0	1/1:2,0:14:18.05:264,18,0	1/1:2,2:24:50.44:496,50,0	1/1:9,1:26:45.93:430,46,0	0/1:5,0:13:0:1,0,0	1/1:12,0:13:17.63:150,18,0	1/1:12,0:23:24.48:204,24,0	1/1:3,17:23:14.53:209,15,0	1/1:15,2:15:29.87:300,30,0	1/1:17,5:25:49.29:639,49,0	1/1:4,0:4:3.04:24,3,0	1/1:18,0:20:21.72:211,22,0	1/1:10,1:38:38.74:388,39,0	./.	1/1:18,0:19:30.06:306,30,0	1/1:4,0:15:15.05:231,15,0	1/1:3,3:8:6.02:96,6,0	1/1:16,1:20:34.06:415,34,0	1/1:27,0:27:11.94:213,12,0	1/1:27,0:26:32.98:317,33,0	1/1:4,1:18:27.09:396,27,0
chr10	91811504	.	AT	A	14370.27	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.266;DP=558;FS=23.821;HRun=6;HaplotypeScore=97.2453;InbreedingCoeff=0.9986;MQ=71.56;MQ0=0;MQRankSum=-7.085;QD=26.76;ReadPosRankSum=4.179;VQSLOD=3.2354;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:57.14:613,57,0	1/1:0,16:16:36.09:386,36,0	0/0:11,0:11:33.08:0,33,410	0/0:10,0:10:27.03:0,27,312	1/1:1,23:24:63.16:677,63,0	1/1:1,17:18:45.11:483,45,0	1/1:1,20:21:57.14:613,57,0	1/1:1,21:22:63.13:661,63,0	1/1:1,11:12:30.07:322,30,0	1/1:1,22:23:66.16:702,66,0	1/1:3,16:19:48.12:515,48,0	1/1:2,16:18:45.11:483,45,0	1/1:4,12:16:33.08:354,33,0	1/1:0,22:22:47.95:514,48,0	1/1:2,23:25:51.13:548,51,0	1/1:0,14:14:39.10:419,39,0	1/1:0,29:29:75.19:806,75,0	1/1:1,15:16:39.10:419,39,0	1/1:3,14:17:42.07:440,42,0	1/1:4,31:35:84.21:903,84,0	1/1:1,18:19:51.13:548,51,0	1/1:1,14:15:36.09:387,36,0	1/1:0,14:14:42.11:451,42,0	1/1:0,15:15:36.05:374,36,0	1/1:3,26:28:68.05:740,68,0	1/1:2,17:19:51.09:531,51,0	1/1:4,27:31:72.18:773,72,0	1/1:0,22:22:66.17:709,66,0
chr10	91811714	.	C	CAAAAA	5778.71	PASS	AB=0.919;AC=51;AF=0.911;AN=56;BaseQRankSum=-0.756;DP=493;FS=3.757;HRun=17;HaplotypeScore=123.0892;InbreedingCoeff=0.0441;MQ=43.93;MQ0=15;MQRankSum=-2.801;QD=11.72;ReadPosRankSum=-1.265;VQSLOD=1.1827;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,1:29:18.05:289,18,0	1/1:6,1:7:6.02:140,6,0	0/1:7,0:4:0:1,0,0	0/1:7,0:4:5.58:6,0,55	1/1:25,0:23:33.10:495,33,0	0/1:9,0:15:31.79:67,0,32	1/1:17,0:17:20.78:209,21,0	1/1:33,0:30:24.55:386,25,0	1/1:12,0:17:9.03:174,9,0	1/1:16,0:25:35.73:354,36,0	1/1:7,0:13:19.70:167,20,0	1/1:9,0:8:6.49:84,6,0	1/1:18,0:17:20.31:195,20,0	1/1:16,0:18:16.21:125,16,0	1/1:19,2:22:23.53:336,24,0	1/1:14,0:20:17.42:227,17,0	1/1:20,1:22:16.75:266,17,0	0/1:13,0:14:22.41:175,0,22	0/1:19,0:17:12.23:182,0,12	1/1:13,4:18:15.03:250,15,0	1/1:9,0:9:8.31:89,8,0	1/1:10,0:18:20.90:203,21,0	1/1:9,1:11:23.69:243,24,0	1/1:8,0:14:6.32:61,6,0	1/1:4,0:11:0.37:106,0,0	1/1:13,1:18:18.06:308,18,0	1/1:16,0:22:15.95:210,16,0	1/1:17,0:14:27.09:431,27,0
chr10	91814461	.	A	AGAACC	2540.13	PASS	AB=0.894;AC=9;AF=0.161;AN=56;BaseQRankSum=4.128;DP=522;FS=1.874;HRun=0;HaplotypeScore=159.2374;InbreedingCoeff=-0.2165;MQ=41.14;MQ0=38;MQRankSum=-2.767;QD=13.51;ReadPosRankSum=1.404;VQSLOD=3.0100;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:47:74.02:0,74,1279	0/0:2,0:2:3.01:0,3,58	0/0:36,0:6:12.96:0,13,162	0/0:42,0:8:1.27:0,1,53	0/1:26,2:28:99:215,0,814	0/0:10,0:10:27.09:0,27,500	0/0:13,0:12:30.10:0,30,592	0/1:27,0:26:99:152,0,552	0/1:4,6:10:92.61:528,0,93	0/0:18,0:14:36:0,36,532	0/0:10,0:9:21.03:0,21,335	0/1:12,1:11:88.55:89,0,172	0/0:14,0:13:39.09:0,39,641	0/0:12,0:12:20.81:0,21,366	0/0:16,0:13:18.06:0,18,351	0/0:14,0:14:39.12:0,39,697	0/0:21,0:16:18.53:0,19,330	0/0:25,0:24:48.09:0,48,814	0/1:20,5:23:99:427,0,491	0/1:21,1:21:99:274,0,312	0/0:7,0:6:18.06:0,18,296	0/0:10,0:10:29.99:0,30,502	0/0:7,0:7:11.99:0,12,193	0/0:17,0:14:30.08:0,30,522	0/0:9,0:8:15.02:0,15,249	0/1:21,3:20:99:294,0,572	0/1:19,2:21:99:391,0,520	0/1:17,0:11:99:310,0,189
chr10	91814467	.	AAAAAAAAAAAG	A	1211.69	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.774;DP=550;FS=13.381;HRun=0;HaplotypeScore=145.1854;InbreedingCoeff=0.8115;MQ=44.09;MQ0=38;MQRankSum=-1.203;QD=12.12;ReadPosRankSum=0.793;VQSLOD=1.9388;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:45,4:45:13.57:829,14,0	1/1:3,0:3:3.48:38,3,0	0/0:42,0:7:16.46:0,16,471	0/0:51,0:12:9.88:0,10,105	0/0:29,0:29:81.03:0,81,2083	0/0:13,0:13:33.10:0,33,994	0/0:13,0:12:27.09:0,27,807	0/0:28,0:26:59.25:0,59,1316	0/0:10,0:10:27.09:0,27,864	0/0:16,0:13:33.11:0,33,905	0/0:13,0:12:35.94:0,36,787	0/0:11,0:9:22.36:0,22,478	0/0:15,0:14:42.13:0,42,1264	0/0:12,0:12:26.82:0,27,729	1/1:16,1:14:8.47:199,8,0	0/0:15,0:15:17.69:0,18,1031	1/1:31,0:26:1.27:277,1,0	0/0:27,0:26:51.80:0,52,1290	0/0:22,0:20:57.19:0,57,1523	0/0:23,0:22:50.59:0,51,1281	0/0:7,0:6:17.27:0,17,491	0/0:7,0:7:18.06:0,18,623	0/0:7,0:7:21:0,21,494	0/0:16,0:13:27.09:0,27,853	0/0:10,0:9:21.06:0,21,585	0/0:24,0:20:54.64:0,55,1417	0/0:21,0:21:54.19:0,54,1648	0/0:17,0:12:9.04:0,9,682
chr10	91814468	.	AAAAAAAAAAG	A	1594.70	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=4.218;DP=550;FS=10.788;HRun=0;HaplotypeScore=136.7821;InbreedingCoeff=0.7783;MQ=44.38;MQ0=38;MQRankSum=-1.542;QD=10.56;ReadPosRankSum=0.272;VQSLOD=1.5617;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,26:44:32.56:931,33,0	1/1:2,1:3:3.48:52,3,0	0/0:44,0:8:19.74:0,20,443	0/1:51,0:12:15.15:15,0,85	0/0:29,0:29:68.31:0,68,1733	0/0:13,0:13:32.77:0,33,850	0/0:13,0:12:30.06:0,30,711	0/0:28,0:26:56.43:0,56,1114	0/0:10,0:10:27.09:0,27,764	0/0:16,0:13:33.11:0,33,780	0/0:13,0:12:35.40:0,35,677	0/0:11,0:9:21.47:0,21,406	0/0:15,0:14:42.13:0,42,1087	0/0:12,0:12:23.97:0,24,603	1/1:10,7:14:8.74:230,9,0	0/0:15,0:15:15.85:0,16,887	1/1:28,4:28:35.47:519,35,0	0/0:27,0:26:51.48:0,51,1103	0/0:22,0:20:57.17:0,57,1323	0/0:23,0:22:48.07:0,48,1079	0/0:7,0:6:16.87:0,17,442	0/0:7,0:7:18.06:0,18,545	0/0:7,0:7:21:0,21,414	0/0:16,0:13:27.09:0,27,725	0/0:10,0:9:21.06:0,21,512	0/0:24,0:20:54:0,54,1217	0/0:20,0:20:54.19:0,54,1427	0/0:17,0:12:7.93:0,8,557
chr10	91814469	.	AAAAAAAAAG	A	1460.23	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=4.185;DP=552;FS=13.767;HRun=0;HaplotypeScore=131.2463;InbreedingCoeff=0.7793;MQ=44.53;MQ0=38;MQRankSum=-2.894;QD=9.67;ReadPosRankSum=0.910;VQSLOD=1.2760;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:46,2:44:34.84:829,35,0	1/1:1,2:3:3.48:75,3,0	0/0:45,0:9:22.35:0,22,406	0/1:51,0:12:7.68:8,0,79	0/0:29,0:29:56.75:0,57,1402	0/0:13,0:13:32.75:0,33,727	0/0:13,0:12:29.99:0,30,586	0/0:28,0:26:52.07:0,52,935	0/0:10,0:10:27.09:0,27,668	0/0:15,0:12:33.04:0,33,649	0/0:13,0:12:33.53:0,34,576	0/0:11,0:9:20.61:0,21,346	0/0:15,0:14:42.06:0,42,912	0/0:14,0:14:29.96:0,30,557	1/1:16,1:14:8.89:194,9,0	0/0:15,0:15:14.17:0,14,744	1/1:30,2:28:49.16:505,49,0	0/0:28,0:27:51.43:0,51,940	0/0:22,0:20:57.01:0,57,1110	0/0:23,0:22:47.30:0,47,873	0/0:7,0:6:16.61:0,17,385	0/0:7,0:7:18.06:0,18,461	0/0:7,0:7:20.99:0,21,336	0/0:16,0:13:27.02:0,27,597	0/0:10,0:9:21.05:0,21,435	0/0:24,0:20:52.28:0,52,1017	0/0:20,0:20:54.18:0,54,1206	0/0:16,0:11:4.88:0,5,427
chr10	91814475	.	AAAG	A	887.49	PASS	AB=0.975;AC=17;AF=0.304;AN=56;BaseQRankSum=4.337;DP=518;FS=22.645;HRun=0;HaplotypeScore=84.5042;InbreedingCoeff=0.2004;MQ=50.11;MQ0=34;MQRankSum=-5.070;QD=3.44;ReadPosRankSum=0.948;VQSLOD=0.2509;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:34:38.91:322,39,0	1/1:3,0:3:3:27,3,0	0/0:47,0:11:22.31:0,22,210	0/1:55,0:15:32.56:33,0,81	0/1:26,0:26:25.67:26,0,171	0/0:12,0:12:29:0,29,228	0/1:11,0:10:9.76:10,0,60	0/0:28,0:26:31.73:0,32,236	0/0:10,0:10:25.18:0,25,146	0/0:14,0:11:0.36:0,0,130	0/0:13,0:12:29.72:0,30,223	0/1:11,0:9:1.94:2,0,39	0/1:16,0:15:9.38:9,0,184	0/0:12,1:13:26.07:0,26,209	1/1:11,0:9:9:77,9,0	0/1:13,1:14:65.27:65,0,125	1/1:28,0:26:56.75:441,57,0	0/0:24,0:23:12.90:0,13,190	0/0:19,1:18:42.08:0,42,335	0/0:21,0:20:26.61:0,27,164	0/0:6,0:6:8.09:0,8,80	0/0:8,0:8:20.67:0,21,162	0/0:8,0:8:23.04:0,23,141	0/1:14,1:12:19.93:20,0,97	0/0:16,0:15:37.87:0,38,258	0/0:20,0:17:30.77:0,31,165	0/1:16,2:18:4.57:5,0,178	0/1:12,0:9:19.52:20,0,27
chr10	91814476	.	AAG	A	943.49	PASS	AB=0.957;AC=19;AF=0.339;AN=56;BaseQRankSum=6.315;DP=510;FS=56.690;HRun=0;HaplotypeScore=76.5632;InbreedingCoeff=0.1001;MQ=50.52;MQ0=31;MQRankSum=-6.096;QD=3.23;ReadPosRankSum=0.908;VQSLOD=-0.2875;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:34:38.15:236,38,0	1/1:3,0:3:2.97:20,3,0	0/0:47,0:11:21.67:0,22,179	0/1:55,0:15:26.46:26,0,73	0/1:25,1:26:52.91:53,0,133	0/0:12,0:12:20.47:0,20,181	0/1:8,2:9:44.59:65,0,45	0/0:27,0:25:19.17:0,19,154	0/0:10,0:10:8.31:0,8,68	0/1:14,0:11:0.01:0,0,117	0/0:12,0:11:30.07:0,30,182	0/1:11,0:9:10.39:10,0,31	0/1:15,1:16:31.77:32,0,178	0/0:13,0:13:26.01:0,26,193	1/1:11,0:9:8.87:57,9,0	0/1:13,1:14:89:89,0,97	1/1:28,0:27:59.59:444,60,0	0/1:21,2:22:12.45:12,0,174	0/0:20,0:18:35.50:0,35,256	0/0:20,0:19:19.05:0,19,125	0/0:6,0:6:7.99:0,8,65	0/0:7,0:7:20.68:0,21,152	0/0:8,0:8:22.25:0,22,129	0/1:14,1:12:33.33:33,0,73	0/0:16,0:15:28.32:0,28,233	0/0:20,0:17:1.47:0,1,67	0/1:18,0:18:7.30:7,0,117	0/1:11,0:8:6.29:29,0,6
chr10	91814481	.	AGTCTTT	A	899.79	PASS	AB=0.786;AC=7;AF=0.125;AN=56;BaseQRankSum=4.231;DP=449;FS=15.175;HRun=0;HaplotypeScore=86.6945;InbreedingCoeff=-0.1594;MQ=54.52;MQ0=23;MQRankSum=-4.196;QD=9.18;ReadPosRankSum=1.785;VQSLOD=0.3366;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:33.34:0,33,533	0/0:4,0:4:5.86:0,6,149	0/0:47,0:11:30.57:0,31,843	0/0:56,0:17:33.59:0,34,786	0/1:14,6:20:99:317,0,1198	0/0:10,0:10:30.10:0,30,1066	0/0:8,0:8:18.06:0,18,536	0/1:13,0:13:51.56:52,0,643	0/0:4,0:4:9.03:0,9,316	0/0:11,0:9:24.08:0,24,780	0/0:12,0:11:30.09:0,30,991	0/0:6,0:5:9.03:0,9,249	0/0:17,0:17:51.17:0,51,1527	0/0:11,0:14:30.10:0,30,1057	0/0:12,0:11:15.02:0,15,340	0/1:14,1:16:26.02:26,0,1200	0/0:28,0:27:58.80:0,59,1484	0/0:23,0:22:57.18:0,57,1972	0/0:12,0:10:27.07:0,27,943	0/1:11,5:15:49.34:49,0,789	0/0:3,0:3:6.01:0,6,216	0/0:7,0:7:21.07:0,21,743	0/0:10,0:10:30.10:0,30,964	0/0:12,0:11:21.07:0,21,638	0/0:17,0:17:48.16:0,48,1704	0/1:7,5:11:99:256,0,397	0/1:10,4:14:99:120,0,725	0/1:3,3:5:99:210,0,180
chr10	91814803	.	C	CCA	9315.09	PASS	AB=0.583;AC=50;AF=0.893;AN=56;BaseQRankSum=8.947;DP=352;FS=26.034;HRun=0;HaplotypeScore=176.4580;InbreedingCoeff=0.5324;MQ=92.18;MQ0=0;MQRankSum=-10.849;QD=30.05;ReadPosRankSum=6.742;VQSLOD=3.8154;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,20:26:21.27:590,21,0	0/1:3,3:6:4.27:112,0,4	0/0:20,0:20:56.66:0,57,773	0/0:22,0:22:62.99:0,63,902	1/1:1,4:5:8.48:91,8,0	1/1:3,6:9:4.41:194,4,0	1/1:5,9:14:35.74:457,36,0	1/1:1,8:9:26.68:369,27,0	1/1:4,17:21:45.25:819,45,0	1/1:6,10:16:18.64:449,19,0	1/1:4,7:11:6.10:147,6,0	1/1:3,16:19:54.13:709,54,0	1/1:2,12:15:45.11:587,45,0	1/1:5,19:24:49.19:802,49,0	1/1:7,9:16:8.37:421,8,0	1/1:1,18:19:57.18:773,57,0	1/1:1,5:6:11.77:136,12,0	1/1:1,6:7:20.94:248,21,0	1/1:2,5:7:20.80:258,21,0	1/1:2,1:3:2.74:12,3,0	0/1:0,6:6:0.23:0,0,61	1/1:2,7:9:2.72:208,3,0	1/1:1,9:10:29.04:290,29,0	1/1:3,7:10:4.15:204,4,0	1/1:2,8:10:25.46:333,25,0	1/1:3,11:14:4.65:431,5,0	1/1:3,11:14:39.11:507,39,0	1/1:1,3:4:12.04:168,12,0
chr10	91814804	.	T	TACTACAGAG	39886.28	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.687;DP=478;FS=0.642;HRun=0;HaplotypeScore=186.4747;InbreedingCoeff=0.8467;MQ=80.72;MQ0=0;MQRankSum=-10.002;QD=91.69;ReadPosRankSum=4.541;VQSLOD=5.2508;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,20:29:60.21:2340,60,0	1/1:7,3:10:18.01:543,18,0	0/0:21,0:21:54.14:0,54,1489	0/0:22,0:22:57.14:0,57,1425	1/1:6,4:10:5.90:261,6,0	1/1:9,6:15:30.10:1202,30,0	1/1:12,8:21:54.17:1923,54,0	1/1:17,7:25:72.24:2713,72,0	1/1:8,15:25:75.24:3014,75,0	1/1:7,10:17:48.16:1949,48,0	1/1:10,7:17:21.02:570,21,0	1/1:7,16:23:66.18:2648,66,0	1/1:7,12:20:57.17:2300,57,0	1/1:7,19:26:75.21:2959,75,0	1/1:11,9:20:60.15:2067,60,0	1/1:10,18:28:75.26:3162,75,0	1/1:5,5:10:15.05:585,15,0	1/1:4,6:10:30.10:1140,30,0	1/1:8,5:13:39.13:1323,39,0	1/1:8,1:9:5.98:130,6,0	1/1:3,6:9:9.03:326,9,0	1/1:6,7:13:24.07:852,24,0	1/1:4,10:14:18.06:794,18,0	1/1:10,7:17:33.08:1248,33,0	1/1:4,9:13:27.09:1129,27,0	1/1:10,11:21:63.22:2572,63,0	1/1:5,11:16:45.14:1799,45,0	1/1:1,3:4:12.01:338,12,0
chr10	91815629	.	C	CT	772.35	PASS	AC=26;AF=0.520;AN=50;BaseQRankSum=5.538;DP=336;FS=10.175;HRun=0;HaplotypeScore=43.3827;InbreedingCoeff=0.8152;MQ=74.85;MQ0=6;MQRankSum=-7.073;QD=7.15;ReadPosRankSum=-1.663;VQSLOD=1.8089;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:13:3.01:41,3,0	./.	0/0:15,0:12:36.12:0,36,496	0/0:20,0:19:39.18:0,39,576	0/0:12,0:12:27.01:0,27,333	1/1:3,0:3:5.90:37,6,0	1/1:10,0:10:16.20:156,16,0	0/0:19,0:19:54.17:0,54,738	0/0:13,0:13:39.13:0,39,544	1/1:5,0:5:11.87:80,12,0	./.	0/0:15,0:15:36.12:0,36,497	./.	1/1:0,5:5:2.84:14,3,0	1/1:0,9:9:2.84:14,3,0	1/1:12,0:11:20.66:131,21,0	1/1:8,0:7:14.77:94,15,0	1/1:9,0:9:23.77:196,24,0	0/0:20,0:20:57.13:0,57,739	0/0:14,0:13:36.11:0,36,486	0/0:46,0:45:99:0,123,1560	1/1:10,0:9:5.90:37,6,0	1/1:10,0:10:8.94:108,9,0	1/1:8,0:7:5.90:37,6,0	1/1:0,5:5:2.98:21,3,0	0/0:19,0:19:57.07:0,57,731	0/0:20,0:20:60.20:0,60,837	0/0:4,0:4:9.03:0,9,115
chr10	91816446	.	G	GA	4416.48	PASS	AB=0.709;AC=18;AF=0.346;AN=52;BaseQRankSum=2.278;DP=777;FS=0.419;HRun=0;HaplotypeScore=173.0202;InbreedingCoeff=0.8459;MQ=26.26;MQ0=181;MQRankSum=-2.163;QD=15.23;ReadPosRankSum=-4.447;VQSLOD=4.9088;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:28:60.20:0,60,824	0/0:19,0:17:42.14:0,42,587	./.	./.	0/1:5,29:28:5.76:414,0,6	0/0:26,0:21:57.15:0,57,761	0/0:28,0:11:24.08:0,24,335	1/1:14,18:14:42.14:586,42,0	1/1:8,24:22:30.10:418,30,0	0/0:40,0:34:87.21:0,87,1172	0/0:19,0:16:39.13:0,39,537	1/1:9,26:26:32.72:433,33,0	0/0:30,0:23:63.15:0,63,846	0/0:35,0:29:75.25:0,75,1041	0/0:33,0:22:51.16:0,51,689	0/0:21,0:19:48.13:0,48,649	0/0:44,0:18:36.08:0,36,481	0/0:31,0:12:27.09:0,27,370	1/1:7,11:10:21.07:293,21,0	1/1:5,19:18:33.02:412,33,0	0/1:25,4:7:68.70:89,0,69	0/0:26,0:19:45.15:0,45,628	0/0:30,0:27:66.21:0,66,884	0/0:27,0:10:18.06:0,18,245	0/0:32,0:27:66.18:0,66,886	1/1:17,24:29:30.32:873,30,0	1/1:4,24:20:36.12:489,36,0	1/1:6,11:11:30.10:410,30,0
chr10	91817211	.	AGTGTGTGTGTGTGTGT	A	1852.35	PASS	AB=0.951;AC=14;AF=0.269;AN=52;BaseQRankSum=5.965;DP=411;FS=10.854;HRun=0;HaplotypeScore=147.5764;InbreedingCoeff=0.2903;MQ=41.02;MQ0=49;MQRankSum=-5.544;QD=11.80;ReadPosRankSum=-3.068;VQSLOD=0.7036;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:19:17.28:237,17,0	1/1:3,3:4:6.02:262,6,0	./.	./.	0/0:13,0:13:12.04:0,12,307	0/0:11,0:10:15.05:0,15,247	0/0:16,0:13:16.26:0,16,345	0/0:28,0:15:6.02:0,6,121	0/0:18,0:20:23.77:0,24,742	0/0:14,0:12:15.94:0,16,296	0/1:16,0:16:99:433,0,215	0/0:11,0:13:21.07:0,21,507	0/1:11,0:11:78.53:79,0,128	0/0:14,0:13:15.02:0,15,246	0/1:10,7:15:8.19:420,0,8	0/1:14,0:14:99:198,0,140	1/1:17,11:20:5.60:170,6,0	0/1:14,0:11:70.69:71,0,176	0/0:17,0:12:17.27:0,17,546	0/0:11,0:11:15.05:0,15,242	0/0:18,0:10:9.03:0,9,217	0/0:10,0:10:15.02:0,15,238	0/0:9,0:9:9.03:0,9,153	1/1:15,0:10:5.91:58,6,0	0/1:13,0:13:42.93:85,0,43	0/0:13,0:11:18.06:0,18,486	0/0:13,0:10:9.03:0,9,279	0/0:8,0:10:11.61:0,12,270
chr10	91817249	.	TGTGTGTGTGTGTGAATGTGG	T	2890.14	PASS	AB=0.905;AC=26;AF=0.464;AN=56;BaseQRankSum=6.798;DP=431;FS=9.255;HRun=0;HaplotypeScore=163.1276;InbreedingCoeff=0.5370;MQ=51.02;MQ0=28;MQRankSum=-0.939;QD=12.96;ReadPosRankSum=3.655;VQSLOD=1.7061;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:17:36.78:0,37,658	0/1:7,0:6:44.17:44,0,182	0/0:27,0:10:21.03:0,21,542	0/0:27,0:15:36.47:0,36,810	0/0:16,0:16:39.08:0,39,2201	1/1:11,0:11:8.84:85,9,0	1/1:13,0:12:3.48:92,3,0	0/0:11,0:7:17.31:0,17,340	0/0:18,0:18:33.53:0,34,828	1/1:2,17:18:41.60:724,42,0	1/1:6,16:21:15.05:794,15,0	0/0:17,0:17:36.09:0,36,856	1/1:3,10:13:2.76:166,3,0	1/1:13,0:13:9.01:117,9,0	0/1:18,0:18:43.64:44,0,434	1/1:7,12:19:11.91:440,12,0	0/1:23,0:18:17.26:17,0,160	0/1:5,8:13:22.39:158,0,22	0/0:14,0:13:34.92:0,35,1259	0/0:11,0:11:11.05:0,11,517	0/0:17,0:14:33.99:0,34,1114	1/1:5,0:5:0.47:1,0,0	1/1:9,0:9:2.49:22,2,0	1/1:1,24:25:5.91:209,6,0	1/1:1,12:13:3.01:166,3,0	0/0:13,0:11:30.04:0,30,1102	0/0:6,0:6:18.06:0,18,640	0/0:10,0:9:21.07:0,21,842
chr10	91817826	.	A	AT	5549.21	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-11.759;DP=608;FS=14.990;HRun=9;HaplotypeScore=60.9316;InbreedingCoeff=0.9604;MQ=77.81;MQ0=1;MQRankSum=-0.040;QD=26.42;ReadPosRankSum=-0.098;VQSLOD=3.8554;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:74.95:0,75,642	0/0:14,0:14:36.45:0,36,309	0/0:30,1:21:2.57:0,3,208	0/0:23,0:14:16.02:0,16,95	1/1:1,26:27:77.99:800,78,0	0/0:29,0:29:83.93:0,84,718	0/0:7,0:7:17.96:0,18,147	1/1:10,20:30:60.12:637,60,0	1/1:2,11:13:30.08:332,30,0	0/0:39,0:39:98.89:0,99,846	0/0:17,0:17:47.96:0,48,412	1/1:1,16:17:39.10:424,39,0	0/0:17,0:17:47.96:0,48,409	0/0:15,0:15:41.86:0,42,346	0/0:16,0:16:44.98:0,45,388	0/0:26,0:26:77.98:0,78,675	0/0:26,0:26:71.15:0,71,594	0/0:24,0:24:39.86:0,40,441	1/1:4,16:20:48.13:531,48,0	1/1:1,24:25:66.14:714,66,0	1/1:0,5:5:9.02:100,9,0	0/0:12,0:12:29.98:0,30,260	0/0:28,0:28:77.93:0,78,666	0/0:10,0:10:26.98:0,27,230	0/0:38,0:37:99:0,111,948	1/1:3,24:27:52.76:764,53,0	1/1:2,24:26:52.91:684,53,0	1/1:2,18:20:51.14:564,51,0
chr10	91818407	.	CTT	C	5894.90	PASS	AB=0.955;AC=39;AF=0.696;AN=56;BaseQRankSum=3.745;DP=532;FS=1.016;HRun=11;HaplotypeScore=144.1205;InbreedingCoeff=0.2647;MQ=50.97;MQ0=6;MQRankSum=-5.295;QD=13.25;ReadPosRankSum=6.615;VQSLOD=1.9720;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:38:32.20:240,0,32	0/1:3,0:4:14.84:15,0,21	0/0:18,0:10:15.01:0,15,182	0/0:27,0:17:29.95:0,30,345	0/1:9,0:23:16.24:26,0,16	1/1:0,15:14:39.10:415,39,0	1/1:8,11:18:36.04:374,36,0	0/1:25,0:30:26.67:27,0,38	1/1:6,0:12:15.81:77,16,0	1/1:5,16:22:48.08:559,48,0	1/1:3,19:22:60.07:613,60,0	0/1:3,0:13:8.43:8,0,28	1/1:3,12:15:42.10:446,42,0	0/1:4,9:12:6.72:285,0,7	1/1:14,0:13:27.30:171,27,0	1/1:4,14:18:25.66:478,26,0	1/1:26,0:26:15.63:227,16,0	1/1:4,6:10:17.96:176,18,0	0/0:17,0:24:7.84:0,8,145	0/1:6,0:14:3.63:4,0,48	0/0:9,0:14:9.58:0,10,78	1/1:0,12:12:33.07:351,33,0	1/1:3,13:16:39.09:415,39,0	1/1:1,10:10:21.04:222,21,0	1/1:7,21:24:62.63:644,63,0	0/1:13,0:23:25.33:25,0,35	0/1:16,0:23:27.17:61,0,27	1/1:3,0:13:11.36:36,11,0
chr10	91818416	.	TTTC	T	5759.98	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-9.734;DP=551;FS=3.079;HRun=0;HaplotypeScore=163.3969;InbreedingCoeff=0.9367;MQ=47.04;MQ0=6;MQRankSum=2.661;QD=18.76;ReadPosRankSum=-2.067;VQSLOD=4.5546;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:38:48.01:254,48,0	1/1:5,0:5:6.99:42,7,0	0/0:22,0:10:10.96:0,11,132	0/0:31,0:14:22.72:0,23,295	1/1:19,3:22:50.22:619,50,0	0/0:17,0:16:32.24:0,32,114	0/0:17,0:16:24.13:0,24,121	1/1:32,2:31:64.68:640,65,0	1/1:11,1:12:35.34:391,35,0	0/0:22,0:22:44.31:0,44,186	0/0:25,0:25:60.41:0,60,258	1/1:15,0:13:29.63:464,30,0	0/0:15,0:15:26.43:0,26,100	0/0:15,0:14:29.25:0,29,126	1/1:12,0:11:26.72:141,27,0	0/1:20,0:19:1.87:2,0,110	1/1:26,0:25:57.46:295,57,0	0/0:11,0:11:23.83:0,24,155	1/1:25,1:25:51:537,51,0	1/1:17,0:17:46.67:530,47,0	1/1:14,0:13:19.83:257,20,0	0/0:12,0:12:27.84:0,28,107	0/0:16,0:16:34.95:0,35,147	0/0:13,0:12:23.89:0,24,117	0/0:28,0:24:44.78:0,45,209	1/1:27,0:26:70.74:709,71,0	1/1:22,3:25:43.30:515,43,0	1/1:11,0:11:26.83:364,27,0
chr10	91818417	.	TTC	T	6785.53	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=-1.185;DP=551;FS=0.563;HRun=0;HaplotypeScore=151.0290;InbreedingCoeff=0.2460;MQ=47.43;MQ0=6;MQRankSum=0.902;QD=13.63;ReadPosRankSum=5.670;VQSLOD=4.6875;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,19:38:78.62:889,79,0	1/1:4,1:5:9.02:95,9,0	0/0:23,0:11:13.31:0,13,148	0/0:30,0:13:23.73:0,24,288	1/1:22,0:22:47.99:329,48,0	1/1:17,0:16:21.65:149,22,0	0/1:17,0:16:2.31:105,0,2	1/1:31,3:31:57.77:470,58,0	1/1:11,1:12:35.80:317,36,0	0/1:23,0:23:23.60:134,0,24	0/1:25,0:25:29.07:182,0,29	1/1:15,0:13:24.22:221,24,0	1/1:15,0:15:21.77:154,22,0	0/1:15,0:14:25.05:109,0,25	1/1:5,7:11:30.07:378,30,0	1/1:20,0:19:22.28:179,22,0	1/1:12,14:25:62.66:702,63,0	0/1:11,0:11:27.35:27,0,41	1/1:24,1:24:45.66:334,46,0	1/1:18,0:18:46.08:304,46,0	1/1:13,0:12:14.04:121,14,0	1/1:12,0:12:23.79:119,24,0	1/1:16,0:16:7.53:146,8,0	0/1:13,0:12:23.59:66,0,24	1/1:28,0:24:3.84:203,4,0	1/1:26,1:26:67.89:463,68,0	1/1:23,2:25:37.40:371,37,0	1/1:10,1:11:26.88:218,27,0
chr10	91818418	.	TC	T	3666.89	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-6.283;DP=551;FS=4.966;HRun=1;HaplotypeScore=155.6266;InbreedingCoeff=0.9655;MQ=47.06;MQ0=6;MQRankSum=1.372;QD=12.87;ReadPosRankSum=-2.197;VQSLOD=1.9520;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:36,5:38:78.44:611,78,0	1/1:4,0:4:8.97:75,9,0	0/0:22,1:11:10.47:0,10,143	0/0:30,0:13:19.72:0,20,215	1/1:22,1:23:44.98:252,45,0	0/0:17,0:16:32.20:0,32,118	0/0:17,0:16:22.90:0,23,102	1/1:34,0:31:50.59:382,51,0	1/1:12,0:12:35.11:220,35,0	0/0:23,0:23:31.99:0,32,214	0/0:25,0:25:52.19:0,52,232	1/1:14,0:12:17.53:154,18,0	0/0:15,0:15:15.50:0,16,91	0/0:15,0:14:13.72:0,14,83	1/1:10,2:11:29.65:217,30,0	0/0:20,0:19:15.63:0,16,104	1/1:25,1:25:59.22:400,59,0	0/0:11,0:11:25.18:0,25,136	1/1:25,0:25:38.10:249,38,0	1/1:17,0:17:46.05:261,46,0	1/1:12,0:11:7.76:93,8,0	0/0:12,0:12:27.20:0,27,102	0/0:16,0:16:32.20:0,32,120	0/0:13,0:12:23.46:0,23,99	0/0:28,1:25:55.37:0,55,209	1/1:27,1:27:63.65:370,64,0	1/1:24,1:25:27.45:219,27,0	1/1:11,0:11:26.44:165,26,0
chr10	91818424	.	TTTC	T	9364.28	PASS	AB=0.971;AC=43;AF=0.768;AN=56;BaseQRankSum=-3.034;DP=567;FS=26.410;HRun=0;HaplotypeScore=151.9334;InbreedingCoeff=0.0542;MQ=45.76;MQ0=5;MQRankSum=-3.679;QD=18.80;ReadPosRankSum=6.955;VQSLOD=2.8092;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,8:36:29.74:459,0,30	1/1:4,1:5:12.03:131,12,0	0/0:32,0:14:5.15:0,5,131	0/0:37,0:16:22.64:0,23,268	1/1:8,13:21:42.72:682,43,0	0/1:17,0:16:14.87:119,0,15	1/1:18,0:17:20.32:268,20,0	1/1:13,21:30:70.21:848,70,0	1/1:12,3:15:25.07:423,25,0	0/1:23,0:23:19.16:183,0,19	0/1:25,0:25:9.49:209,0,9	1/1:1,13:12:36.12:551,36,0	0/1:13,0:13:36.06:83,0,36	0/1:14,0:14:16.90:116,0,17	1/1:13,0:12:22.90:259,23,0	0/1:19,2:19:12.65:247,0,13	1/1:29,1:29:53.78:618,54,0	0/1:12,0:12:49.20:91,0,49	1/1:8,16:23:56.53:725,57,0	1/1:11,6:17:51.03:717,51,0	1/1:5,7:11:20.91:288,21,0	0/1:12,0:12:48.12:48,0,82	1/1:18,0:18:3.94:176,4,0	1/1:13,0:12:23:146,23,0	1/1:28,0:25:47.15:342,47,0	1/1:9,17:25:64:872,64,0	1/1:7,15:22:35.11:458,35,0	1/1:6,6:12:26.65:305,27,0
chr10	91818425	.	TTC	T	2969.76	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-5.902;DP=568;FS=8.454;HRun=0;HaplotypeScore=166.2199;InbreedingCoeff=0.8523;MQ=44.64;MQ0=4;MQRankSum=0.297;QD=10.46;ReadPosRankSum=-2.056;VQSLOD=2.5614;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:35:53.68:110,0,54	1/1:5,0:5:9.50:34,10,0	0/0:32,0:14:15.79:0,16,145	0/0:37,0:15:14.68:0,15,210	1/1:20,1:21:33.16:276,33,0	0/0:17,0:16:37.16:0,37,164	0/0:18,0:17:3.05:0,3,117	1/1:32,2:30:65.79:432,66,0	1/1:14,2:16:11.31:204,11,0	0/0:23,0:23:42.95:0,43,242	0/0:26,0:26:63.24:0,63,330	1/1:14,0:12:35.70:258,36,0	0/0:13,0:13:35.09:0,35,171	0/0:14,0:14:26.97:0,27,151	1/1:14,0:13:5.42:49,5,0	0/0:21,0:19:5.57:0,6,152	1/1:29,0:28:43.15:213,43,0	0/0:12,0:12:14.72:0,15,133	1/1:23,1:23:52.68:333,53,0	1/1:17,0:17:49.13:328,49,0	1/1:12,0:11:20.53:141,21,0	0/0:12,0:12:33.07:0,33,175	0/0:19,0:19:31.32:0,31,186	0/0:13,0:12:17.41:0,17,95	0/0:26,1:25:44.84:0,45,237	1/1:26,0:25:46.85:398,47,0	1/1:22,0:22:32.21:257,32,0	1/1:12,0:12:25.54:158,26,0
chr10	91818427	.	C	CT	10561.76	PASS	AB=0.971;AC=53;AF=0.946;AN=56;BaseQRankSum=-1.351;DP=578;FS=0.947;HRun=9;HaplotypeScore=135.7661;InbreedingCoeff=0.4166;MQ=43.25;MQ0=5;MQRankSum=-1.938;QD=19.60;ReadPosRankSum=2.106;VQSLOD=3.5597;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,15:35:4.10:503,4,0	1/1:1,4:5:12.03:133,12,0	0/1:32,0:14:5.22:5,0,66	0/0:37,0:14:0.03:0,0,75	1/1:20,1:21:29.16:492,29,0	1/1:6,12:17:33.09:365,33,0	1/1:1,17:17:48.13:528,48,0	1/1:33,1:30:48.94:473,49,0	1/1:11,5:16:8.55:270,9,0	1/1:6,17:23:50.87:563,51,0	1/1:6,20:26:40.46:665,40,0	1/1:13,1:12:33.96:350,34,0	1/1:4,9:13:27.07:298,27,0	1/1:4,9:14:31.18:359,31,0	1/1:5,9:13:26.89:269,27,0	1/1:7,14:19:46:525,46,0	1/1:10,22:31:58.93:585,59,0	1/1:4,8:12:24.06:263,24,0	1/1:22,1:22:50.01:480,50,0	1/1:9,8:17:48.02:473,48,0	1/1:11,0:10:17.92:153,18,0	1/1:7,5:12:18.05:194,18,0	1/1:5,14:20:45.12:490,45,0	1/1:3,11:13:29.26:330,29,0	1/1:3,23:25:72.19:793,72,0	1/1:26,1:26:49.09:553,49,0	1/1:21,1:22:30.29:261,30,0	1/1:11,1:12:18.04:190,18,0
chr10	91818454	.	C	CT	4699.46	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-1.400;DP=545;FS=5.966;HRun=7;HaplotypeScore=121.6436;InbreedingCoeff=0.9634;MQ=50.70;MQ0=6;MQRankSum=-5.885;QD=22.49;ReadPosRankSum=2.277;VQSLOD=3.6404;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:63.04:0,63,593	0/0:6,0:6:15.02:0,15,145	0/0:39,0:15:13.93:0,14,273	0/0:29,0:8:11.29:0,11,96	0/0:18,0:18:33.04:0,33,317	1/1:4,12:15:24.07:290,24,0	1/1:3,18:21:51.06:574,51,0	0/0:21,0:20:48.06:0,48,458	0/0:15,0:15:26.98:0,27,259	1/1:4,14:18:38.85:470,39,0	1/1:10,16:26:42.09:491,42,0	0/0:16,1:14:27.03:0,27,260	1/1:5,6:11:21.06:251,21,0	1/1:4,6:10:18.01:201,18,0	0/0:16,0:15:27.01:0,27,260	1/1:7,10:16:4.13:318,4,0	0/0:31,0:29:59.57:0,60,557	1/1:4,13:17:33.57:400,34,0	0/0:25,0:25:51.03:0,51,484	0/0:22,0:22:57.08:0,57,550	0/0:11,0:11:18.03:0,18,174	1/1:3,10:13:27.04:310,27,0	1/1:5,16:22:39.12:470,39,0	1/1:3,13:15:30.05:345,30,0	1/1:5,17:21:48.15:580,48,0	0/0:20,0:20:50.94:0,51,475	0/0:25,0:25:39.01:0,39,371	0/0:6,0:6:15:0,15,137
chr10	91818611	.	C	CT	6254.83	PASS	AB=0.724;AC=48;AF=0.857;AN=56;BaseQRankSum=-2.883;DP=468;FS=0.000;HRun=12;HaplotypeScore=62.5320;InbreedingCoeff=-0.0950;MQ=73.32;MQ0=1;MQRankSum=-0.913;QD=13.37;ReadPosRankSum=1.615;VQSLOD=5.0282;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:45.07:438,45,0	0/1:1,2:4:10.05:61,0,10	0/1:22,0:14:6.47:6,0,48	0/1:17,0:11:9.34:9,0,37	1/1:9,16:26:32.02:459,32,0	0/1:8,6:14:19.64:151,0,20	1/1:2,10:12:5.13:212,5,0	1/1:9,16:26:10.03:388,10,0	1/1:3,11:15:32.89:306,33,0	1/1:2,2:15:34.37:191,34,0	1/1:2,1:18:44.82:247,45,0	1/1:4,5:8:11.91:140,12,0	1/1:2,0:11:17.08:85,17,0	1/1:8,2:14:25.99:167,26,0	1/1:5,20:24:13.24:452,13,0	0/1:5,10:15:38.67:148,0,39	0/1:7,8:15:13.34:176,0,13	1/1:3,2:21:45.65:258,46,0	0/1:9,8:18:10.98:197,0,11	1/1:4,12:17:16.99:311,17,0	1/1:5,13:19:32.89:306,33,0	1/1:3,1:7:5.78:32,6,0	1/1:2,0:10:17.04:85,17,0	1/1:1,0:12:25.57:128,26,0	1/1:1,2:15:43.13:256,43,0	1/1:9,12:23:35.32:301,35,0	0/1:8,15:24:1.86:305,0,2	1/1:3,16:19:45.07:438,45,0
chr10	91819187	.	TAC	T	1021.95	PASS	AB=1.000;AC=36;AF=0.667;AN=54;BaseQRankSum=7.068;DP=468;FS=0.000;HRun=0;HaplotypeScore=117.6632;InbreedingCoeff=0.4575;MQ=66.69;MQ0=7;MQRankSum=-5.225;QD=3.03;ReadPosRankSum=3.995;VQSLOD=2.1567;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:12:8.43:40,8,0	1/1:4,0:8:11.36:56,11,0	1/1:40,0:26:0.68:2,1,0	./.	0/0:19,0:19:12.91:0,13,118	1/1:6,4:13:14.65:126,15,0	1/1:11,2:14:6.32:47,6,0	0/0:21,0:19:11.78:0,12,75	0/0:11,0:11:5.49:0,5,35	1/1:15,3:18:9.02:97,9,0	1/1:13,4:17:12.03:130,12,0	0/1:15,0:15:9.31:9,0,104	1/1:10,1:10:3.01:33,3,0	1/1:8,2:10:3.01:33,3,0	1/1:13,0:22:25.57:126,26,0	1/1:14,6:20:15.04:163,15,0	1/1:8,0:13:7.50:33,7,0	0/0:10,0:10:0.89:0,1,2	0/1:20,0:20:7.71:8,0,90	0/1:14,0:14:15.59:16,0,28	0/1:32,0:31:5.86:6,0,120	1/1:17,2:19:6.02:65,6,0	1/1:10,5:16:6.02:65,6,0	1/1:7,1:8:3.01:33,3,0	1/1:11,3:15:11.67:108,12,0	0/0:21,0:21:34.22:0,34,269	0/0:20,0:20:15.34:0,15,282	0/0:6,0:6:9.75:0,10,73
chr10	91819228	.	A	ACT	4022.27	PASS	AB=0.967;AC=45;AF=0.804;AN=56;BaseQRankSum=10.880;DP=545;FS=15.070;HRun=0;HaplotypeScore=158.8827;InbreedingCoeff=0.1360;MQ=54.98;MQ0=12;MQRankSum=-0.315;QD=8.71;ReadPosRankSum=6.751;VQSLOD=1.6380;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:8.02:39,8,0	1/1:7,0:7:5.14:14,5,0	0/0:43,0:18:37.66:0,38,457	0/0:40,0:17:24.53:0,25,330	0/1:25,0:25:6.64:170,0,7	1/1:23,0:23:20.45:114,20,0	1/1:19,0:19:20.38:104,20,0	0/1:33,0:32:23.33:566,0,23	1/1:11,0:11:17.82:149,18,0	1/1:25,0:25:28.21:427,28,0	1/1:15,0:15:13.51:84,14,0	0/1:21,2:23:20.02:262,0,20	1/1:11,0:10:13.19:83,13,0	1/1:8,0:8:10.29:64,10,0	1/1:21,0:21:17.54:73,18,0	1/1:13,0:13:22.98:139,23,0	1/1:12,0:12:7.21:64,7,0	0/1:9,0:10:7.95:41,0,8	1/1:23,2:24:5.54:367,6,0	1/1:17,1:18:16.99:136,17,0	0/1:33,1:33:54.53:55,0,79	1/1:15,0:15:17.83:120,18,0	1/1:18,0:18:8.79:56,9,0	1/1:10,0:10:1.55:4,2,0	1/1:11,0:11:8.13:37,8,0	0/1:27,1:28:35.42:471,0,35	0/1:20,0:20:99:259,0,112	1/1:9,1:10:1.28:128,1,0
chr10	91819230	.	A	ACTCT	9700.89	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=3.743;DP=594;FS=0.000;HRun=0;HaplotypeScore=180.8071;InbreedingCoeff=0.7720;MQ=53.62;MQ0=12;MQRankSum=-5.257;QD=18.98;ReadPosRankSum=3.412;VQSLOD=4.5868;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:18:11.17:90,11,0	1/1:9,0:9:9.28:34,9,0	0/0:43,0:18:50.90:0,51,740	0/0:40,0:17:40.37:0,40,677	1/1:24,1:26:33.11:561,33,0	1/1:27,0:27:23.85:228,24,0	1/1:18,0:20:25.01:233,25,0	1/1:35,0:34:75.22:1333,75,0	1/1:10,0:11:18.06:310,18,0	1/1:29,0:29:72.94:1012,73,0	1/1:18,0:18:16.52:173,17,0	1/1:22,1:23:32.59:494,33,0	1/1:19,0:18:23.62:263,24,0	1/1:11,0:11:14.41:168,14,0	1/1:21,0:21:27.07:160,27,0	1/1:14,0:14:27.06:280,27,0	1/1:11,0:13:17.07:155,17,0	1/1:11,0:11:9.03:124,9,0	1/1:25,2:26:64.51:977,65,0	1/1:20,0:21:12.04:191,12,0	1/1:13,23:35:9.03:204,9,0	1/1:15,0:16:19.56:235,20,0	1/1:21,0:21:10.27:114,10,0	1/1:2,0:11:2.51:7,3,0	1/1:12,0:12:10.60:73,11,0	1/1:27,3:30:72.12:1275,72,0	1/1:18,2:21:42.09:690,42,0	1/1:8,2:10:15.05:318,15,0
chr10	91819280	.	TTTTGTTTGTTTG	T	16750.36	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=3.799;DP=525;FS=0.000;HRun=0;HaplotypeScore=192.8070;InbreedingCoeff=0.3980;MQ=60.02;MQ0=5;MQRankSum=-1.513;QD=33.43;ReadPosRankSum=2.678;VQSLOD=4.3231;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,17:26:21.03:419,21,0	1/1:3,2:5:6.02:151,6,0	0/1:23,0:19:24.63:25,0,184	0/0:24,0:20:19.47:0,19,596	1/1:9,11:20:24:462,24,0	1/1:9,12:21:18.06:540,18,0	1/1:4,12:16:9.03:261,9,0	1/1:16,11:25:33.08:591,33,0	1/1:3,15:18:27.09:820,27,0	1/1:8,16:24:39.09:1274,39,0	1/1:7,10:17:27.05:548,27,0	1/1:3,17:20:27.09:883,27,0	1/1:4,11:15:21.07:673,21,0	1/1:5,10:15:27.09:906,27,0	1/1:5,13:18:15.05:452,15,0	1/1:4,15:19:27.09:937,27,0	1/1:5,10:15:6.02:209,6,0	1/1:3,10:13:9.03:308,9,0	1/1:9,12:20:36.12:1167,36,0	1/1:6,22:28:62.98:1291,63,0	1/1:11,1:12:11.98:142,12,0	1/1:7,17:24:39.04:905,39,0	1/1:7,16:23:36.12:835,36,0	1/1:12,1:12:3.01:77,3,0	1/1:1,15:16:24.08:662,24,0	1/1:4,19:23:57.13:1639,57,0	1/1:6,13:19:15.05:472,15,0	1/1:4,6:10:3.01:104,3,0
chr10	91819749	.	GGA	G	30.51	PASS	AB=0.643;AC=1;AF=0.018;AN=56;BaseQRankSum=1.834;DP=653;FS=6.010;HRun=0;HaplotypeScore=88.1553;InbreedingCoeff=-0.0188;MQ=72.86;MQ0=0;MQRankSum=-1.810;QD=3.39;ReadPosRankSum=0.912;VQSLOD=1.6547;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,138,2455	0/0:5,0:5:15.05:0,15,270	0/0:16,0:15:36.12:0,36,624	0/0:30,0:30:78.27:0,78,1360	0/0:14,0:14:42.14:0,42,756	0/0:24,0:24:69.24:0,69,1234	0/0:22,0:22:63.20:0,63,1104	0/0:35,0:35:93.31:0,93,1628	0/0:30,0:30:90.31:0,90,1607	0/0:20,0:19:51.17:0,51,917	0/0:15,0:15:36.12:0,36,628	0/0:32,0:32:81.23:0,81,1359	0/0:16,0:16:45.15:0,45,810	0/0:31,0:31:81.28:0,81,1437	0/0:29,0:29:84.29:0,84,1512	0/0:24,0:24:72.25:0,72,1288	0/0:32,0:32:90.29:0,90,1581	0/0:16,0:16:45.15:0,45,804	0/0:37,0:37:99:0,99,1768	0/0:15,0:15:45.15:0,45,810	0/0:45,0:45:99:0,126,2264	0/0:10,0:10:30.10:0,30,540	0/0:15,0:15:45.15:0,45,810	0/0:21,0:21:54.17:0,54,933	0/0:12,0:12:36.12:0,36,648	0/0:31,0:31:90.30:0,90,1585	0/0:18,0:18:51.12:0,51,854	0/1:4,5:9:99:105,0,195
chr10	91820990	.	C	CTT	4490.97	PASS	AB=0.875;AC=53;AF=0.946;AN=56;BaseQRankSum=-1.393;DP=588;FS=1.621;HRun=15;HaplotypeScore=109.3102;InbreedingCoeff=-0.0624;MQ=69.07;MQ0=3;MQRankSum=0.204;QD=7.64;ReadPosRankSum=-0.882;VQSLOD=2.4686;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,2:32:17.72:127,18,0	1/1:5,0:11:18.51:123,19,0	0/1:27,0:21:11.24:18,0,11	0/1:17,0:14:25.72:27,0,26	1/1:8,0:19:31.15:199,31,0	1/1:9,4:19:20.92:184,21,0	0/1:6,1:15:8.83:89,0,9	1/1:13,7:21:20.91:174,21,0	1/1:5,16:23:20.43:184,20,0	1/1:26,0:27:38.88:318,39,0	1/1:8,0:18:14.86:95,15,0	1/1:20,0:20:15.58:123,16,0	1/1:12,2:21:11.43:81,11,0	1/1:15,0:15:26.90:244,27,0	1/1:5,1:26:11.98:112,12,0	1/1:19,0:18:35.95:330,36,0	1/1:12,11:25:6.01:67,6,0	1/1:11,11:23:16.20:149,16,0	1/1:6,5:20:35.89:323,36,0	1/1:6,7:20:36.97:310,37,0	1/1:4,1:12:6.01:57,6,0	1/1:18,0:17:17.99:155,18,0	1/1:6,12:18:8.47:65,8,0	1/1:11,8:18:14.95:141,15,0	1/1:8,2:24:20.63:164,21,0	1/1:20,2:22:38.28:355,38,0	1/1:12,22:39:16.80:195,17,0	1/1:5,1:13:10.88:84,11,0
chr10	91820997	.	T	TTTT	4282.71	PASS	AB=1.000;AC=52;AF=0.929;AN=56;BaseQRankSum=-2.935;DP=558;FS=0.000;HRun=8;HaplotypeScore=81.2305;InbreedingCoeff=0.1401;MQ=67.22;MQ0=3;MQRankSum=0.391;QD=8.05;ReadPosRankSum=-1.680;VQSLOD=-0.1273;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:16.47:159,16,0	1/1:12,0:11:13.34:121,13,0	0/0:26,0:17:0.73:0,1,31	0/1:20,0:15:27.59:28,0,33	1/1:18,0:18:30.65:197,31,0	1/1:17,0:17:14.94:129,15,0	0/1:14,0:14:15.95:83,0,16	1/1:14,0:14:17.99:197,18,0	1/1:22,0:22:19.12:132,19,0	1/1:20,6:27:32.07:285,32,0	1/1:17,0:17:15.94:139,16,0	1/1:20,0:20:16.08:147,16,0	1/1:20,0:20:7.67:64,8,0	1/1:14,0:14:24.03:292,24,0	1/1:27,0:27:10.25:104,10,0	1/1:19,0:18:32.97:352,33,0	1/1:19,0:19:6.47:66,6,0	1/1:20,0:20:12.10:105,12,0	1/1:23,0:23:32.87:284,33,0	1/1:20,0:20:36.53:289,37,0	1/1:11,0:11:6.02:102,6,0	1/1:14,0:13:18:197,18,0	1/1:19,0:19:9.11:70,9,0	1/1:16,0:14:9.93:93,10,0	1/1:24,0:24:16.33:156,16,0	1/1:24,0:24:36.41:305,36,0	1/1:37,0:37:4.02:104,4,0	1/1:12,0:12:9.06:82,9,0
chr10	91822422	.	C	CT	4730.48	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-5.794;DP=297;FS=1.064;HRun=8;HaplotypeScore=35.6036;InbreedingCoeff=0.8912;MQ=67.65;MQ0=0;MQRankSum=-0.307;QD=26.28;ReadPosRankSum=-0.894;VQSLOD=4.7341;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:18:39.59:451,40,0	1/1:1,2:3:6.02:69,6,0	0/0:5,0:5:3:0,3,27	0/0:6,0:4:8.84:0,9,82	1/1:2,12:13:30.02:329,30,0	0/0:9,0:9:23.99:0,24,215	0/0:4,0:4:12.01:0,12,110	1/1:10,29:39:84.24:959,84,0	1/1:3,3:6:6.02:69,6,0	0/0:9,0:9:27.01:0,27,247	0/0:17,0:17:48.03:0,48,439	1/1:3,7:10:21.06:242,21,0	0/0:9,0:9:27:0,27,243	0/0:6,0:6:18.01:0,18,165	1/1:0,10:10:21.06:242,21,0	0/0:6,0:6:15:0,15,134	1/1:4,16:20:45.13:519,45,0	0/0:21,0:20:33:0,33,302	1/1:2,11:13:33.08:369,33,0	1/1:1,8:9:24.07:277,24,0	1/1:0,4:4:12.04:138,12,0	0/0:3,0:3:3:0,3,27	0/0:8,0:8:18.01:0,18,165	0/0:4,0:4:8.96:0,9,74	0/0:10,0:10:27.01:0,27,247	1/1:0,13:13:39.10:441,39,0	1/1:1,8:9:18.05:208,18,0	1/1:0,12:12:36.11:415,36,0
chr10	91824530	.	AT	A	12475.53	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-3.111;DP=421;FS=0.000;HRun=4;HaplotypeScore=51.7981;InbreedingCoeff=0.5910;MQ=69.23;MQ0=1;MQRankSum=-2.557;QD=30.21;ReadPosRankSum=3.342;VQSLOD=4.9250;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:57.17:683,57,0	1/1:1,3:4:12.04:141,12,0	0/0:8,0:7:14.91:0,15,155	0/1:11,0:11:11.33:11,0,55	1/1:2,23:25:66.09:734,66,0	1/1:4,10:14:36.10:423,36,0	1/1:0,16:16:39.12:467,39,0	1/1:1,29:30:87.17:972,87,0	1/1:0,14:14:39.12:466,39,0	1/1:0,16:16:48.15:576,48,0	1/1:6,8:14:41.98:470,42,0	1/1:0,15:15:39.12:468,39,0	1/1:0,3:3:6.02:72,6,0	1/1:0,13:13:36.11:431,36,0	1/1:1,16:17:48.15:575,48,0	1/1:0,12:12:36.11:432,36,0	1/1:2,24:26:60.18:718,60,0	1/1:0,23:23:66.20:791,66,0	1/1:2,22:24:66.16:762,66,0	1/1:2,14:16:45.12:528,45,0	1/1:1,6:7:12.04:144,12,0	1/1:1,8:9:21.06:252,21,0	1/1:1,12:13:30.09:360,30,0	1/1:0,13:13:30.09:359,30,0	1/1:0,11:11:27.08:324,27,0	1/1:0,16:16:45.11:524,45,0	1/1:2,14:16:39.12:468,39,0	1/1:0,9:9:27.08:324,27,0
chr10	91824630	.	G	GGGGGT	20986.46	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.820;DP=429;FS=0.000;HRun=0;HaplotypeScore=102.6491;InbreedingCoeff=0.9102;MQ=70.02;MQ0=0;MQRankSum=-8.089;QD=53.81;ReadPosRankSum=4.165;VQSLOD=5.1508;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,17:36:87.06:1961,87,0	1/1:0,8:8:18.06:539,18,0	0/0:18,0:18:41.70:0,42,692	0/0:21,0:18:44.64:0,45,765	1/1:3,17:21:36.12:979,36,0	1/1:1,11:12:27.09:808,27,0	1/1:4,10:16:27.09:763,27,0	1/1:5,16:25:61.04:1219,61,0	1/1:4,9:13:27.09:779,27,0	1/1:6,5:13:23.98:515,24,0	1/1:4,15:19:33.10:900,33,0	1/1:1,13:14:36.12:1075,36,0	1/1:1,7:8:18.06:534,18,0	1/1:2,13:19:21.02:613,21,0	1/1:1,9:11:27.09:806,27,0	1/1:3,8:11:21.07:625,21,0	1/1:5,10:15:42.14:1165,42,0	1/1:4,8:12:24.08:694,24,0	1/1:5,17:23:60.01:1481,60,0	1/1:4,16:21:38.22:1050,38,0	1/1:4,10:14:14.94:360,15,0	1/1:2,6:9:15.05:443,15,0	1/1:1,6:9:8.72:260,9,0	1/1:6,8:14:29.74:635,30,0	1/1:1,9:12:24.08:718,24,0	1/1:3,14:19:42.08:992,42,0	1/1:3,9:12:27.09:804,27,0	1/1:0,3:3:9.03:269,9,0
chr10	91825274	.	ACAC	A	25851.01	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.022;DP=672;FS=19.735;HRun=0;HaplotypeScore=144.6921;InbreedingCoeff=0.9925;MQ=83.68;MQ0=0;MQRankSum=-11.769;QD=42.10;ReadPosRankSum=7.752;VQSLOD=3.9540;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,46:47:99:1972,114,0	1/1:2,8:10:18.02:282,18,0	0/0:26,0:27:81.13:0,81,1700	0/0:31,0:31:84.76:0,85,1923	1/1:0,27:27:69.23:1162,69,0	1/1:3,25:27:57.20:1005,57,0	1/1:1,19:20:57.20:1005,57,0	1/1:4,24:28:72.23:1237,72,0	1/1:0,13:13:33.11:581,33,0	1/1:4,26:30:78.19:1299,78,0	1/1:0,22:22:54.19:952,54,0	1/1:4,20:24:48.95:992,49,0	1/1:3,27:30:75.26:1306,75,0	1/1:1,16:17:39.13:672,39,0	1/1:3,25:28:66.23:1162,66,0	1/1:2,20:22:57.19:973,57,0	1/1:1,26:27:51.17:899,51,0	1/1:2,20:22:39.13:688,39,0	1/1:0,16:16:45.14:745,45,0	1/1:1,30:31:84.29:1445,84,0	1/1:4,28:32:66.14:1146,66,0	1/1:1,23:24:66.23:1147,66,0	1/1:2,19:21:51.06:895,51,0	1/1:1,25:26:63.21:1093,63,0	1/1:0,10:10:24.08:423,24,0	1/1:1,22:23:66.23:1148,66,0	1/1:1,25:26:72.25:1249,72,0	1/1:0,10:10:21.07:370,21,0
chr10	91825514	.	CCTT	C	13828.04	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=9.128;DP=654;FS=0.610;HRun=0;HaplotypeScore=171.3520;InbreedingCoeff=0.9692;MQ=89.73;MQ0=0;MQRankSum=-9.626;QD=43.08;ReadPosRankSum=2.949;VQSLOD=5.9290;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,59:59:99:2431,138,0	1/1:1,12:13:27.09:475,27,0	0/0:33,0:33:92.45:0,92,1977	0/0:24,0:25:63.65:0,64,1308	1/1:1,17:18:33.11:582,33,0	0/0:20,0:20:60.21:0,60,1414	0/0:21,0:21:63.20:0,63,1381	1/1:1,23:24:63.11:981,63,0	1/1:0,16:16:39.13:686,39,0	0/0:23,0:23:66.22:0,66,1516	0/0:28,0:28:84.26:0,84,1894	1/1:1,18:19:51.17:896,51,0	0/0:26,0:26:78.27:0,78,1808	0/0:19,0:19:57.15:0,57,1247	1/1:0,23:23:63.22:1107,63,0	0/0:29,0:29:81.27:0,81,1870	1/1:1,24:25:60.21:1056,60,0	0/0:25,0:25:72.18:0,72,1557	1/1:2,19:21:54.16:920,54,0	1/1:1,25:26:69.19:1180,69,0	1/1:2,18:20:48.64:844,49,0	0/0:19,0:19:54.18:0,54,1234	0/0:21,0:21:63.20:0,63,1417	0/0:23,0:23:69.23:0,69,1542	0/0:21,0:21:60.21:0,60,1364	1/1:2,23:25:1.26:1118,1,0	1/1:1,17:18:51.13:863,51,0	1/1:0,14:14:39.13:688,39,0
chr10	91826288	.	TGA	T	9031.79	PASS	AB=0.529;AC=27;AF=0.482;AN=56;BaseQRankSum=18.944;DP=529;FS=11.517;HRun=0;HaplotypeScore=146.9953;InbreedingCoeff=0.9236;MQ=76.81;MQ0=0;MQRankSum=-8.874;QD=37.48;ReadPosRankSum=4.410;VQSLOD=5.8232;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:31:82.21:1147,82,0	1/1:1,7:8:12.17:289,12,0	0/0:19,0:19:57.17:0,57,1056	0/0:26,0:26:75.07:0,75,1296	1/1:0,12:12:36.12:515,36,0	0/0:21,0:21:60.21:0,60,1213	0/0:27,0:27:78.25:0,78,1519	1/1:4,10:14:34.72:440,35,0	1/1:0,13:13:36.12:515,36,0	0/0:19,0:19:57.20:0,57,1142	0/0:15,0:15:45.15:0,45,912	1/1:0,21:21:63.21:902,63,0	0/0:29,0:29:87.30:0,87,1740	0/0:23,0:23:69.24:0,69,1400	1/1:1,17:18:48.16:688,48,0	0/0:24,0:24:72.25:0,72,1462	1/1:1,28:29:78.25:1098,78,0	0/0:22,0:22:63.22:0,63,1246	1/1:3,16:19:48.11:647,48,0	1/1:0,6:6:15.05:215,15,0	1/1:0,19:19:51.17:729,51,0	0/0:8,0:8:24.08:0,24,487	0/0:18,0:18:54.19:0,54,1090	0/0:27,0:27:81.25:0,81,1590	0/0:10,0:10:30.10:0,30,608	0/1:2,16:18:15.85:537,0,16	1/1:1,18:19:54.62:751,55,0	1/1:0,14:14:39.13:559,39,0
chr10	91826409	.	AGCT	A	14680.84	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=5.227;DP=521;FS=18.227;HRun=0;HaplotypeScore=152.9218;InbreedingCoeff=0.9322;MQ=78.41;MQ0=0;MQRankSum=-7.929;QD=31.10;ReadPosRankSum=5.748;VQSLOD=4.0581;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:41:93.31:1394,93,0	1/1:6,0:6:15.03:207,15,0	0/0:23,0:22:45.13:0,45,843	0/0:26,0:25:47.19:0,47,796	1/1:15,0:15:21.52:299,22,0	1/1:2,17:19:45.15:703,45,0	1/1:6,25:31:57.19:890,57,0	1/1:13,0:13:21.06:298,21,0	1/1:17,0:17:48.14:692,48,0	1/1:4,14:18:42.11:611,42,0	1/1:0,4:4:8.96:112,9,0	1/1:19,0:19:45.14:668,45,0	1/1:2,17:19:48.16:749,48,0	1/1:1,17:18:45.15:703,45,0	1/1:15,0:15:30.10:457,30,0	1/1:4,21:25:51.17:797,51,0	1/1:36,0:36:81.19:1189,81,0	1/1:7,16:23:36.12:563,36,0	1/1:18,0:18:39.02:495,39,0	1/1:9,0:8:24.08:368,24,0	1/1:42,0:42:66.15:961,66,0	1/1:1,11:12:24.08:361,24,0	1/1:2,9:10:12.04:187,12,0	1/1:3,12:15:27.09:422,27,0	1/1:0,12:12:30.10:453,30,0	1/1:17,0:17:39.09:554,39,0	1/1:11,0:11:21.07:320,21,0	1/1:6,0:6:15.05:230,15,0
chr10	91826416	.	GC	G	2981.11	PASS	AB=0.894;AC=40;AF=0.714;AN=56;BaseQRankSum=12.016;DP=496;FS=1.046;HRun=1;HaplotypeScore=173.8246;InbreedingCoeff=0.1356;MQ=72.24;MQ0=0;MQRankSum=-8.633;QD=6.85;ReadPosRankSum=10.920;VQSLOD=-0.5886;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,35:40:45.82:494,46,0	1/1:2,4:6:12.33:90,12,0	0/0:21,0:17:45.08:0,45,660	0/0:27,0:25:69.10:0,69,914	1/1:4,9:15:3.95:124,4,0	0/1:18,0:18:19.42:19,0,21	0/1:28,0:28:19.23:19,0,77	0/1:9,5:14:48.94:80,0,49	1/1:5,13:18:0.58:203,1,0	0/1:15,0:15:11.61:12,0,19	0/1:4,0:4:0.01:0,0,13	1/1:4,14:18:21.30:237,21,0	1/1:17,0:17:19.94:44,20,0	0/1:18,0:18:19.31:19,0,21	1/1:5,10:15:32.43:224,32,0	1/1:21,0:21:21.18:47,21,0	1/1:9,24:33:29.79:440,30,0	0/1:19,0:19:8.77:9,0,61	1/1:3,10:13:16.90:155,17,0	1/1:0,9:8:23.46:144,23,0	0/1:17,28:45:7.39:314,0,7	0/1:11,0:11:0.05:8,0,0	0/0:13,0:12:2.99:0,3,116	1/1:13,0:13:11.21:25,11,0	1/1:13,0:13:0.48:11,0,0	1/1:1,12:15:11.76:197,12,0	1/1:4,6:10:24.47:160,24,0	0/1:2,5:7:36.14:72,0,36
chr10	91826418	.	TGA	T	5398.62	PASS	AB=0.908;AC=43;AF=0.768;AN=56;BaseQRankSum=11.867;DP=506;FS=5.663;HRun=0;HaplotypeScore=174.5319;InbreedingCoeff=0.0432;MQ=69.28;MQ0=0;MQRankSum=-9.078;QD=11.81;ReadPosRankSum=10.788;VQSLOD=3.1681;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,35:40:70.23:765,70,0	1/1:2,4:6:14.38:125,14,0	0/0:22,0:18:48.16:0,48,939	0/0:27,0:24:69.16:0,69,1201	1/1:7,9:16:2.20:165,2,0	1/1:18,0:18:2.55:100,3,0	0/1:30,0:30:99:109,0,128	0/1:4,9:13:15.19:183,0,15	1/1:5,13:18:18.70:347,19,0	0/1:15,0:15:27.06:69,0,27	1/1:4,0:4:4.96:18,5,0	1/1:4,14:18:32.81:356,33,0	1/1:17,0:17:38.96:150,39,0	1/1:18,0:18:5:99,5,0	1/1:6,10:16:8.45:259,8,0	0/1:24,0:24:25.03:116,0,25	1/1:8,24:32:32.03:617,32,0	0/1:19,0:19:65.24:65,0,77	1/1:3,10:13:31.97:263,32,0	1/1:1,9:9:26.96:227,27,0	1/1:15,28:43:38.76:599,39,0	1/1:11,0:11:14.45:59,14,0	0/1:14,0:13:9.84:10,0,132	0/1:15,0:15:10.92:61,0,11	0/1:14,0:14:19.72:50,0,20	1/1:4,12:16:25.23:310,25,0	1/1:4,6:10:8.72:170,9,0	0/1:2,5:7:12:107,0,12
chr10	91826419	.	GATT	G	3927.52	PASS	AB=0.994;AC=29;AF=0.518;AN=56;BaseQRankSum=7.947;DP=509;FS=1.600;HRun=0;HaplotypeScore=187.1364;InbreedingCoeff=-0.4736;MQ=68.29;MQ0=0;MQRankSum=-9.661;QD=8.91;ReadPosRankSum=11.017;VQSLOD=1.8844;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:41:85.48:588,0,85	0/1:6,0:6:7.23:70,0,7	0/0:23,0:19:51.14:0,51,1020	0/0:26,0:23:39.54:0,40,1209	0/1:16,0:16:53.60:129,0,54	0/1:19,0:19:55.95:56,0,62	0/1:31,0:31:99:108,0,228	0/1:13,0:13:99:107,0,125	0/1:18,0:18:21.09:308,0,21	0/1:15,0:15:27.20:27,0,80	0/1:4,0:4:10.83:11,0,12	1/1:17,0:17:19.18:323,19,0	1/1:17,0:17:9.33:82,9,0	0/1:18,0:18:37.18:58,0,37	0/1:16,0:16:84.16:169,0,84	0/1:24,0:24:59.25:59,0,99	0/1:32,0:32:15.37:513,0,15	0/0:19,0:19:8.45:0,8,145	1/1:12,0:12:30.41:209,30,0	1/1:10,0:9:2:190,2,0	0/1:37,6:43:99:381,0,175	0/1:11,0:11:3:42,0,3	0/1:14,0:13:9.55:10,0,228	0/1:16,0:16:31.91:32,0,97	0/1:14,0:14:13.09:13,0,91	0/1:16,0:16:11.77:215,0,12	0/1:11,0:11:44.13:121,0,44	0/1:7,0:7:6.99:105,0,7
chr10	91826760	.	T	TAATA	8348.95	PASS	AB=0.611;AC=51;AF=0.944;AN=54;BaseQRankSum=-0.797;DP=299;FS=10.562;HRun=0;HaplotypeScore=72.7855;InbreedingCoeff=0.2107;MQ=31.82;MQ0=47;MQRankSum=-0.375;QD=28.30;ReadPosRankSum=0.586;VQSLOD=3.9071;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,7:12:18.06:418,18,0	1/1:4,2:6:12.04:230,12,0	0/0:2,0:2:3:0,3,37	./.	1/1:6,7:13:27.09:572,27,0	1/1:5,5:9:12.04:304,12,0	1/1:5,2:5:6.02:132,6,0	1/1:25,6:19:39.09:762,39,0	1/1:5,3:7:9.03:191,9,0	1/1:3,7:9:12.04:304,12,0	1/1:2,10:10:24.08:569,24,0	1/1:4,1:4:6.02:151,6,0	1/1:7,3:9:12.04:268,12,0	1/1:8,5:12:12.04:299,12,0	1/1:7,1:7:9.03:190,9,0	1/1:6,8:13:24.08:551,24,0	1/1:7,4:9:15.02:270,15,0	1/1:6,11:12:27.09:684,27,0	1/1:14,2:9:15.05:355,15,0	1/1:5,2:5:6.02:115,6,0	1/1:6,2:4:2.97:76,3,0	1/1:4,2:4:6.02:115,6,0	1/1:2,4:5:9.03:228,9,0	1/1:4,1:4:3.01:39,3,0	0/1:4,7:9:6.88:397,0,7	1/1:6,7:11:21.07:495,21,0	1/1:7,4:9:11.96:156,12,0	1/1:2,5:7:21.07:476,21,0
chr10	91826775	.	T	TAAA	6084.74	PASS	AB=0.588;AC=27;AF=0.482;AN=56;BaseQRankSum=-5.257;DP=303;FS=1.175;HRun=10;HaplotypeScore=83.1698;InbreedingCoeff=0.8475;MQ=43.88;MQ0=9;MQRankSum=-4.970;QD=34.18;ReadPosRankSum=-2.460;VQSLOD=4.0447;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,11:12:27.09:519,27,0	1/1:0,4:4:12.04:230,12,0	0/0:6,0:4:5.95:0,6,73	0/0:4,0:4:4.22:0,4,35	1/1:4,9:13:27.09:499,27,0	0/0:8,0:8:12.01:0,12,146	0/0:5,0:6:5.91:0,6,54	1/1:14,18:25:57.18:1046,57,0	1/1:0,6:6:15.05:288,15,0	0/0:17,0:16:36.08:0,36,428	0/0:11,0:11:25.36:0,25,306	1/1:1,6:8:18.06:326,18,0	0/0:7,0:7:18.05:0,18,215	0/0:10,0:10:24.07:0,24,292	1/1:0,6:6:18.06:345,18,0	0/0:11,0:11:24.03:0,24,280	1/1:2,13:16:27.09:518,27,0	0/0:13,0:13:36.07:0,36,419	1/1:11,5:13:21.02:297,21,0	1/1:4,3:8:18.04:287,18,0	1/1:5,3:8:15.05:253,15,0	0/0:7,0:6:18.06:0,18,219	0/0:8,0:7:18.04:0,18,206	0/0:4,0:4:6.01:0,6,73	0/0:10,0:9:23.97:0,24,258	0/1:3,7:9:12.40:378,0,12	1/1:7,11:19:42.09:711,42,0	1/1:2,6:8:21.07:388,21,0
chr10	91827373	.	A	AT	7007.30	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=8.936;DP=628;FS=1.036;HRun=7;HaplotypeScore=89.9385;InbreedingCoeff=0.9969;MQ=78.55;MQ0=0;MQRankSum=-1.973;QD=29.08;ReadPosRankSum=0.379;VQSLOD=5.0096;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,147,1393	0/0:9,0:9:18.03:0,18,174	0/0:12,0:13:23.78:0,24,215	0/0:16,0:18:29.95:0,30,274	1/1:0,27:27:72.22:859,72,0	0/0:21,0:21:57.07:0,57,544	0/0:14,0:14:36.03:0,36,336	1/1:7,22:29:66.19:785,66,0	1/1:1,21:22:57.17:689,57,0	0/0:29,0:29:72.05:0,72,678	0/0:25,0:25:60.09:0,60,579	1/1:3,27:30:75.23:906,75,0	0/0:21,0:21:63.10:0,63,608	0/0:11,0:11:24.04:0,24,232	0/0:17,0:17:45.05:0,45,429	0/0:14,0:14:42.04:0,42,394	0/0:23,0:23:57.08:0,57,550	0/0:25,0:25:66.10:0,66,637	1/1:2,24:26:72.20:853,72,0	1/1:5,16:21:48.15:578,48,0	1/1:3,17:20:45.14:544,45,0	0/0:20,0:20:54.08:0,54,518	0/0:23,0:23:66.10:0,66,637	0/0:19,0:19:54.08:0,54,521	0/0:33,0:33:90.04:0,90,850	1/1:3,24:27:46.22:817,46,0	1/1:0,26:26:63.19:760,63,0	1/1:0,12:12:18.06:217,18,0
chr10	91828273	.	AGGACCTCT	A	23267.29	PASS	AB=0.545;AC=51;AF=0.981;AN=52;BaseQRankSum=-0.020;DP=480;FS=0.000;HRun=0;HaplotypeScore=139.7853;InbreedingCoeff=-0.0250;MQ=37.45;MQ0=17;MQRankSum=-2.206;QD=48.47;ReadPosRankSum=-0.248;VQSLOD=4.6163;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,38:40:84.16:2130,84,0	1/1:0,6:6:15.01:359,15,0	./.	./.	1/1:1,18:19:33.11:919,33,0	1/1:5,15:19:24.08:677,24,0	1/1:6,16:19:39.13:1100,39,0	1/1:6,23:27:69.15:1550,69,0	1/1:4,19:23:36.08:950,36,0	1/1:5,13:16:39.12:973,39,0	1/1:1,13:14:27.09:762,27,0	1/1:1,17:18:33.04:804,33,0	1/1:4,15:18:30.10:846,30,0	1/1:1,21:22:45.11:1178,45,0	1/1:3,18:20:42.10:1121,42,0	1/1:2,23:25:48.13:1291,48,0	1/1:3,11:12:12:274,12,0	1/1:2,8:9:15.05:424,15,0	1/1:1,12:12:32.81:738,33,0	1/1:2,17:19:45.02:1064,45,0	1/1:10,5:11:18.05:413,18,0	1/1:1,7:7:12.04:339,12,0	1/1:0,18:18:27.05:697,27,0	0/1:3,15:18:99:501,0,186	1/1:2,15:16:24.08:677,24,0	1/1:1,27:28:81.28:2126,81,0	1/1:5,14:18:36.12:1015,36,0	1/1:0,5:5:12.04:339,12,0
chr10	91828484	.	T	TC	3063.22	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-1.415;DP=244;FS=20.610;HRun=8;HaplotypeScore=55.4620;InbreedingCoeff=0.7403;MQ=101.12;MQ0=1;MQRankSum=-3.082;QD=19.39;ReadPosRankSum=2.359;VQSLOD=2.2495;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:15:34.82:0,35,301	0/0:7,0:7:15:0,15,137	0/0:28,0:20:28.44:0,28,282	0/0:24,0:23:5.19:0,5,164	1/1:1,7:7:15:158,15,0	1/1:0,5:5:15.04:173,15,0	1/1:1,11:12:18.05:208,18,0	1/1:5,1:6:2.54:34,3,0	1/1:3,1:4:6.02:69,6,0	1/1:5,8:13:24.04:263,24,0	1/1:4,13:15:32.77:376,33,0	1/1:1,2:3:3.01:35,3,0	1/1:0,7:7:14.84:152,15,0	1/1:1,7:8:12.04:138,12,0	0/0:7,0:7:14.99:0,15,137	1/1:3,5:8:24:245,24,0	0/0:5,0:5:9.47:0,9,83	1/1:2,4:6:12:125,12,0	1/1:0,4:4:12.04:138,12,0	1/1:1,1:2:3.89:36,4,0	1/1:1,6:7:12.04:138,12,0	1/1:0,10:10:24.06:268,24,0	1/1:2,5:7:12.03:131,12,0	1/1:0,8:8:5.91:69,6,0	1/1:2,10:12:18.05:208,18,0	1/1:0,3:3:9.03:104,9,0	1/1:0,7:7:12.03:138,12,0	1/1:0,1:1:3.01:35,3,0
chr10	91828821	.	AC	A	18916.11	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.064;DP=607;FS=13.165;HRun=3;HaplotypeScore=63.4614;InbreedingCoeff=0.9991;MQ=81.96;MQ0=0;MQRankSum=-8.279;QD=32.95;ReadPosRankSum=5.709;VQSLOD=3.8095;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,45:47:99:1525,123,0	1/1:0,11:11:27.08:333,27,0	0/0:15,0:15:32.30:0,32,408	0/0:18,0:18:49.01:0,49,641	1/1:0,18:18:45.14:558,45,0	1/1:0,25:25:72.23:892,72,0	1/1:3,17:20:48.15:595,48,0	1/1:2,30:32:81.25:1001,81,0	1/1:1,17:18:42.13:521,42,0	1/1:1,24:25:72.20:863,72,0	1/1:2,20:22:57.18:706,57,0	1/1:1,20:21:60.19:744,60,0	1/1:0,18:18:48.15:595,48,0	1/1:0,23:23:66.21:818,66,0	1/1:1,20:21:54.17:669,54,0	1/1:0,22:22:66.21:818,66,0	1/1:0,29:29:87.27:1079,87,0	1/1:0,16:16:45.14:556,45,0	1/1:2,14:16:42.13:520,42,0	1/1:0,13:13:39.12:483,39,0	1/1:1,27:28:60.19:743,60,0	1/1:1,24:25:63.20:781,63,0	1/1:0,16:16:42.13:518,42,0	1/1:0,19:19:48.15:595,48,0	1/1:0,16:16:36.11:446,36,0	1/1:0,26:26:78.24:957,78,0	1/1:0,34:34:93.29:1153,93,0	1/1:0,13:13:36.11:446,36,0
chr10	91829340	.	A	AAAC	24529.11	PASS	AB=0.604;AC=51;AF=0.911;AN=56;BaseQRankSum=-4.601;DP=695;FS=2.757;HRun=0;HaplotypeScore=95.3236;InbreedingCoeff=0.7527;MQ=69.07;MQ0=2;MQRankSum=-5.255;QD=37.51;ReadPosRankSum=4.316;VQSLOD=5.7802;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:35.19:730,35,0	1/1:11,0:11:15.05:207,15,0	0/0:19,0:16:27.02:0,27,330	0/0:22,0:18:19.19:0,19,226	1/1:5,21:27:54.14:1018,54,0	1/1:3,28:31:72.25:1479,72,0	1/1:6,18:24:45.15:925,45,0	1/1:16,13:32:13.46:845,13,0	1/1:5,18:24:54.19:1097,54,0	1/1:2,29:33:87.28:1739,87,0	1/1:5,17:22:51.13:1005,51,0	1/1:4,23:28:54.19:1101,54,0	1/1:5,21:26:45.05:871,45,0	1/1:3,16:20:45.15:923,45,0	1/1:21,0:21:27.21:631,27,0	1/1:7,19:26:51.17:1048,51,0	1/1:20,0:20:33.99:447,34,0	1/1:4,14:19:39.08:758,39,0	1/1:11,12:23:48.03:924,48,0	1/1:7,22:31:57.13:1127,57,0	0/1:11,19:32:58.83:871,0,59	1/1:9,17:26:45.11:879,45,0	1/1:9,22:31:43.79:1095,44,0	1/1:8,13:23:39.13:769,39,0	1/1:7,12:19:27.09:555,27,0	1/1:5,25:30:69.16:1337,69,0	1/1:6,37:43:93.12:1901,93,0	1/1:2,4:6:12.04:247,12,0
chr10	91829354	.	A	ACAC	15058.25	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=2.229;DP=695;FS=4.285;HRun=0;HaplotypeScore=124.7745;InbreedingCoeff=-0.2657;MQ=70.40;MQ0=2;MQRankSum=-3.507;QD=23.17;ReadPosRankSum=15.107;VQSLOD=2.3253;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:57.15:1200,57,0	1/1:1,7:9:15.05:330,15,0	0/0:21,0:18:41.80:0,42,432	0/0:24,0:20:41.34:0,41,453	0/1:23,0:23:12.73:530,0,13	0/1:32,0:32:12.65:791,0,13	0/1:25,0:25:86.67:481,0,87	0/1:29,0:29:99:336,0,208	0/1:23,0:23:11.60:601,0,12	1/1:34,0:34:6.90:850,7,0	0/1:20,0:20:12.78:543,0,13	0/1:29,0:29:61.64:577,0,62	1/1:22,0:22:16.36:502,16,0	1/1:20,0:20:12.19:524,12,0	1/1:3,24:27:48.16:1057,48,0	0/1:31,0:31:99:535,0,181	1/1:1,18:20:18.13:707,18,0	1/1:15,0:15:36.11:458,36,0	0/1:24,0:24:99:427,0,160	0/1:32,0:32:52.67:581,0,53	0/1:36,0:36:99:451,0,309	1/1:22,0:22:0.20:461,0,0	0/1:26,0:26:7.74:619,0,8	0/1:18,0:18:22.82:358,0,23	0/1:18,0:18:41.80:283,0,42	0/1:33,0:33:79.03:652,0,79	1/1:40,0:40:23.38:1084,23,0	0/1:12,0:12:99:120,0,121
chr10	91830321	.	GT	G	9921.01	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.559;DP=599;FS=2.310;HRun=13;HaplotypeScore=179.9296;InbreedingCoeff=0.9631;MQ=69.75;MQ0=1;MQRankSum=-2.301;QD=17.72;ReadPosRankSum=5.303;VQSLOD=4.1707;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:65.54:481,66,0	1/1:2,11:13:29.79:219,30,0	0/0:25,1:19:16.16:0,16,130	0/0:11,2:12:9.29:0,9,82	1/1:8,13:21:35.41:248,35,0	1/1:2,17:19:47.68:350,48,0	1/1:3,15:18:38.74:284,39,0	1/1:5,21:26:56.33:412,56,0	1/1:2,11:13:35.77:260,36,0	1/1:4,21:25:49.75:443,50,0	1/1:1,22:23:59.59:437,60,0	1/1:5,16:21:44.68:328,45,0	1/1:3,15:18:41.72:306,42,0	1/1:3,24:27:71.47:525,71,0	1/1:5,21:26:50.58:371,51,0	1/1:1,15:16:44.71:328,45,0	1/1:4,29:33:83.42:612,83,0	1/1:1,13:14:35.70:258,36,0	1/1:6,10:16:29.49:212,29,0	1/1:1,21:22:62.52:449,63,0	1/1:0,13:13:38.78:284,39,0	1/1:4,12:16:32.66:236,33,0	1/1:0,25:25:68.49:503,68,0	1/1:2,21:23:53.65:393,54,0	1/1:1,22:23:65.63:481,66,0	1/1:1,27:28:80.49:584,80,0	1/1:5,27:32:68.47:503,68,0	1/1:3,19:22:56.60:415,57,0
chr10	91830546	.	AT	A	9371.75	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.426;DP=485;FS=13.047;HRun=10;HaplotypeScore=136.3079;InbreedingCoeff=0.9498;MQ=65.27;MQ0=1;MQRankSum=-3.276;QD=20.83;ReadPosRankSum=3.474;VQSLOD=3.9271;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:29:65.79:552,66,0	1/1:0,4:3:9:78,9,0	0/0:19,0:11:22.88:0,23,171	0/0:16,0:10:13.91:0,14,103	1/1:1,18:19:50.94:434,51,0	1/1:2,14:16:38.96:338,39,0	1/1:3,14:17:38.93:338,39,0	1/1:3,28:29:74.87:646,75,0	1/1:1,13:14:38.89:324,39,0	1/1:5,19:25:59.84:520,60,0	1/1:2,17:19:50.93:434,51,0	1/1:3,12:15:41.96:360,42,0	1/1:0,9:9:21:182,21,0	1/1:1,13:14:38.97:338,39,0	1/1:3,14:17:38.96:337,39,0	1/1:1,8:9:20.98:182,21,0	1/1:5,21:26:59.81:507,60,0	1/1:6,14:20:38.56:322,39,0	1/1:5,16:20:50.93:439,51,0	1/1:1,21:22:59.94:512,60,0	1/1:0,9:9:26.91:220,27,0	1/1:3,15:18:41.84:348,42,0	1/1:2,9:11:20.96:182,21,0	1/1:1,7:8:20.94:175,21,0	1/1:2,18:20:50.95:441,51,0	1/1:2,19:21:53.96:468,54,0	1/1:6,16:22:44.88:382,45,0	1/1:1,13:14:35.98:312,36,0
chr10	91830711	.	AT	A	13287.22	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.062;DP=558;FS=5.686;HRun=8;HaplotypeScore=87.4940;InbreedingCoeff=0.9899;MQ=67.37;MQ0=0;MQRankSum=-6.379;QD=24.56;ReadPosRankSum=4.590;VQSLOD=5.3576;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:93.15:898,93,0	1/1:2,10:12:27.04:261,27,0	0/0:11,0:11:27.07:0,27,297	0/0:6,0:6:15.04:0,15,164	1/1:2,23:25:66.11:637,66,0	1/1:1,15:15:39.06:377,39,0	1/1:1,11:12:30.05:290,30,0	1/1:3,29:31:81.06:767,81,0	1/1:0,19:19:48.07:463,48,0	1/1:1,32:33:93.12:890,93,0	1/1:4,27:31:66.09:637,66,0	1/1:1,12:13:33.05:319,33,0	1/1:0,14:14:39.06:377,39,0	1/1:0,16:16:42.07:406,42,0	1/1:1,24:25:57.09:550,57,0	1/1:1,11:12:33.05:319,33,0	1/1:2,23:25:60.09:579,60,0	1/1:0,13:14:41.10:383,41,0	1/1:8,17:25:51.06:483,51,0	1/1:3,20:23:48.07:463,48,0	1/1:2,18:20:51.08:493,51,0	1/1:1,20:21:57.09:550,57,0	1/1:0,24:24:66.10:637,66,0	1/1:0,16:16:45.02:424,45,0	1/1:2,14:16:36.05:348,36,0	1/1:0,26:26:78.13:753,78,0	1/1:1,23:24:66.11:637,66,0	1/1:0,14:14:36.06:348,36,0
chr10	91830906	.	CCTT	C	20919.51	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.533;DP=580;FS=5.259;HRun=0;HaplotypeScore=113.0320;InbreedingCoeff=0.9631;MQ=67.00;MQ0=2;MQRankSum=-3.705;QD=39.47;ReadPosRankSum=7.431;VQSLOD=5.1745;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:60.20:964,60,0	1/1:0,12:11:33.11:530,33,0	0/0:21,0:20:46.34:0,46,866	0/0:27,0:25:60.20:0,60,1148	1/1:2,8:10:15.05:241,15,0	1/1:1,16:17:48.16:771,48,0	1/1:3,22:25:57.19:916,57,0	1/1:6,23:29:66.17:968,66,0	1/1:2,26:28:69.24:1109,69,0	1/1:3,15:18:45.15:721,45,0	1/1:1,13:14:24.08:385,24,0	1/1:1,25:26:66.23:1061,66,0	1/1:0,22:22:66.23:1060,66,0	1/1:2,26:28:75.26:1204,75,0	1/1:1,21:22:57.19:916,57,0	1/1:0,20:20:57.19:916,57,0	1/1:0,21:21:54.65:854,55,0	1/1:0,25:25:75.26:1205,75,0	1/1:3,14:17:42.14:670,42,0	1/1:1,9:10:18.02:261,18,0	1/1:2,27:29:62.93:1012,63,0	1/1:0,9:9:15.05:241,15,0	1/1:1,12:13:27.09:433,27,0	1/1:2,27:29:66.22:1061,66,0	1/1:1,19:20:51.17:819,51,0	1/1:0,25:25:72.25:1157,72,0	1/1:0,28:28:78.27:1254,78,0	1/1:1,4:5:12.04:193,12,0
chr10	91836780	.	A	AC	101.54	PASS	AB=1.000;AC=5;AF=0.50;AN=10;BaseQRankSum=-0.624;DP=123;FS=0.000;HRun=1;HaplotypeScore=60.3815;MQ=48.45;MQ0=21;MQRankSum=2.199;QD=14.51;ReadPosRankSum=3.053;VQSLOD=3.1313;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:57,0:14:37.25:0,37,431	0/0:57,0:16:32.99:0,33,377	./.	./.	./.	1/1:2,3:3:9.03:135,9,0	./.	./.	./.	./.	./.	./.	0/1:1,0:1:0:0,0,0	./.	./.	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:45,3,0	./.	./.	./.	./.	./.
chr10	91836994	.	ACGCG	A	140.57	PASS	AB=1.000;AC=8;AF=0.400;AN=20;BaseQRankSum=0.295;DP=179;FS=4.472;HRun=0;HaplotypeScore=28.1966;InbreedingCoeff=0.1864;MQ=19.91;MQ0=31;MQRankSum=-0.412;QD=2.23;ReadPosRankSum=-1.237;VQSLOD=0.6296;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:31,0:3:2.32:0,2,30	0/1:26,0:1:0:0,0,0	./.	./.	0/1:9,0:7:0:0,0,0	./.	./.	0/1:17,0:15:64.36:174,0,64	./.	./.	0/1:5,0:3:0:0,0,0	./.	./.	./.	1/1:2,0:3:0.47:1,0,0	1/1:2,0:1:3.01:36,3,0	./.	0/0:6,0:5:0:0,0,0	./.	./.	./.	./.	0/0:8,3:10:0:0,0,0	0/0:2,0:1:3.01:0,3,57	./.	./.
chr10	91836995	.	CGCG	C	59.32	PASS	AB=0.914;AC=6;AF=0.273;AN=22;BaseQRankSum=-1.031;DP=176;FS=0.000;HRun=0;HaplotypeScore=28.6957;InbreedingCoeff=0.1742;MQ=20.04;MQ0=30;MQRankSum=0.788;QD=1.32;ReadPosRankSum=-1.880;VQSLOD=0.7105;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:4:0:0,0,0	./.	0/0:31,0:3:2.81:0,3,41	0/0:27,0:2:2.71:0,3,37	./.	./.	0/1:10,0:7:0:0,0,0	./.	./.	0/1:11,6:15:99:123,0,225	./.	./.	0/0:5,0:3:0:0,0,0	./.	./.	./.	1/1:3,0:3:0.47:1,0,0	0/0:2,0:1:0.89:0,1,2	./.	0/1:3,0:4:0.13:0,0,0	./.	./.	./.	./.	0/1:10,1:10:0.05:0,0,0	0/0:2,0:1:3.01:0,3,64	./.	./.
chr10	91837003	.	CACAA	C	88.34	PASS	AB=0.937;AC=7;AF=0.292;AN=24;BaseQRankSum=-0.271;DP=205;FS=0.000;HRun=0;HaplotypeScore=28.4821;InbreedingCoeff=0.2143;MQ=20.28;MQ0=30;MQRankSum=0.380;QD=1.50;ReadPosRankSum=-0.163;VQSLOD=0.7206;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:44,0:3:2.78:0,3,33	0/0:31,0:3:5.79:0,6,101	./.	./.	0/1:12,0:8:0:0,0,0	./.	./.	0/1:13,6:18:99:152,0,129	./.	./.	0/1:4,0:3:0:0,0,0	./.	./.	./.	1/1:5,0:5:0.46:1,0,0	./.	0/0:3,0:1:0:0,0,0	0/0:8,0:8:0:0,0,0	./.	0/1:7,0:6:0:0,0,0	./.	./.	0/1:11,1:10:0.03:0,0,0	./.	0/0:2,0:2:0:0,0,0	0/0:1,0:1:2.98:0,3,22
chr10	91837096	.	ACG	A	111.79	PASS	AB=1.000;AC=12;AF=0.600;AN=20;BaseQRankSum=0.000;DP=172;FS=0.000;HRun=0;HaplotypeScore=18.2309;InbreedingCoeff=0.3778;MQ=17.45;MQ0=58;MQRankSum=-1.271;QD=2.11;ReadPosRankSum=1.271;VQSLOD=0.7902;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:3,0:3:1.73:0,2,5	0/0:26,0:1:2.90:0,3,16	./.	./.	./.	0/1:4,0:4:0:0,0,0	./.	./.	1/1:3,0:2:3:25,3,0	./.	./.	0/1:5,0:3:0:0,0,0	1/1:10,1:8:0.47:1,0,0	./.	./.	1/1:2,1:2:5.98:57,6,0	./.	1/1:8,2:4:9.02:100,9,0	./.	1/1:17,0:5:1.82:5,2,0	./.	./.	./.	./.	./.	0/0:1,0:1:0:0,0,0	./.
chr10	91837164	.	ACG	A	92.56	PASS	AB=0.829;AC=14;AF=0.538;AN=26;BaseQRankSum=0.328;DP=210;FS=0.000;HRun=0;HaplotypeScore=26.8613;InbreedingCoeff=-0.0270;MQ=26.33;MQ0=32;MQRankSum=-0.591;QD=1.30;ReadPosRankSum=-0.328;VQSLOD=0.6680;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,3:7:0:0,0,0	./.	0/0:31,0:1:3.01:0,3,45	0/0:34,0:1:2.92:0,3,17	./.	./.	./.	./.	1/1:7,3:10:2.93:18,3,0	0/1:4,0:3:0.44:0,0,42	./.	0/1:6,3:6:0.11:0,0,0	0/1:4,1:4:1.67:2,0,2	./.	./.	./.	1/1:8,0:6:3.40:20,3,0	0/1:2,1:5:13.98:31,0,14	0/1:6,2:7:19.49:53,0,19	./.	./.	./.	./.	./.	./.	0/1:5,1:5:3.05:43,0,3	0/1:4,0:3:7.79:10,0,8	1/1:2,0:1:0.89:2,1,0
chr10	91837184	.	A	ACG	118.91	PASS	AB=0.918;AC=15;AF=0.469;AN=32;BaseQRankSum=3.601;DP=383;FS=2.647;HRun=0;HaplotypeScore=63.8739;InbreedingCoeff=0.0295;MQ=21.05;MQ0=71;MQRankSum=-0.463;QD=0.76;ReadPosRankSum=2.727;VQSLOD=1.4906;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,1:12:0.01:0,0,0	./.	./.	./.	./.	./.	0/1:13,2:6:0.02:0,0,0	0/0:13,0:4:0.60:0,1,17	1/1:17,0:15:2.49:9,2,0	0/1:5,1:6:31.22:31,0,65	./.	1/1:23,0:17:0.37:1,0,0	1/1:15,1:10:0.84:23,1,0	./.	./.	./.	0/0:19,0:15:14.58:0,15,192	0/1:5,2:6:15.14:42,0,15	0/1:24,1:13:73.80:74,0,143	./.	0/0:53,0:26:2.44:0,2,12	./.	./.	0/0:18,3:15:0.47:0,0,1	0/1:6,0:3:0:0,0,0	0/1:19,0:15:23.33:23,0,214	0/0:6,0:5:8.96:0,9,102	1/1:3,0:2:2.49:10,2,0
chr10	91837186	.	ACACG	A	73.02	PASS	AB=1.000;AC=15;AF=0.441;AN=34;BaseQRankSum=4.500;DP=393;FS=1.955;HRun=0;HaplotypeScore=63.4817;InbreedingCoeff=0.1526;MQ=20.94;MQ0=78;MQRankSum=0.370;QD=0.47;ReadPosRankSum=2.638;VQSLOD=1.1243;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:12:0.03:0,0,0	./.	./.	./.	./.	./.	0/1:15,0:6:0.01:0,0,0	0/0:15,0:5:5.74:0,6,37	1/1:18,0:15:2.87:15,3,0	0/1:6,0:6:11.36:11,0,26	./.	0/0:22,1:17:0.36:0,0,1	1/1:15,0:9:1.79:23,2,0	./.	0/0:20,0:16:0:0,0,0	./.	0/0:19,0:15:3.96:0,4,224	1/1:7,0:6:3.74:29,4,0	0/1:26,0:13:44.86:45,0,108	./.	0/0:51,5:27:0.40:0,0,1	./.	./.	1/1:24,0:17:0.47:1,0,0	0/0:8,0:4:0:0,0,0	0/1:21,0:15:31.73:32,0,173	0/0:6,0:5:9.41:0,9,114	1/1:3,0:2:3.48:12,3,0
chr10	91837198	.	ACG	A	185.98	PASS	AB=0.988;AC=16;AF=0.471;AN=34;BaseQRankSum=2.883;DP=430;FS=14.356;HRun=0;HaplotypeScore=67.9598;InbreedingCoeff=0.0835;MQ=21.47;MQ0=86;MQRankSum=1.319;QD=0.68;ReadPosRankSum=0.420;VQSLOD=0.1827;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:14:0:0,0,0	./.	./.	./.	./.	0/0:6,0:3:0:0,0,0	1/1:24,0:12:0.46:1,0,0	1/1:19,0:8:5.80:38,6,0	1/1:19,0:14:2.37:8,2,0	0/1:5,0:5:8.28:12,0,8	./.	0/1:28,0:19:0.10:0,0,1	0/1:15,0:9:4.15:4,0,6	./.	0/0:22,0:17:0:0,0,0	./.	0/0:20,0:16:12.13:0,12,183	0/1:8,0:6:10.70:11,0,33	0/1:24,1:11:44.80:76,0,45	./.	0/1:78,2:43:0.38:1,0,0	./.	./.	0/0:26,0:18:0.36:0,0,1	./.	0/1:25,1:19:99:108,0,109	0/0:7,0:5:7.98:0,8,60	1/1:4,0:2:3.44:22,3,0
chr10	91837208	.	ACACG	A	537.74	PASS	AB=0.992;AC=18;AF=0.429;AN=42;BaseQRankSum=1.856;DP=454;FS=18.747;HRun=0;HaplotypeScore=71.6512;InbreedingCoeff=0.0902;MQ=21.54;MQ0=95;MQRankSum=-0.467;QD=2.17;ReadPosRankSum=0.384;VQSLOD=-0.5057;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:17:0:0,0,0	./.	./.	./.	./.	0/1:7,0:4:0.01:0,0,0	0/1:27,0:13:0:0,0,0	1/1:21,0:9:16.40:183,16,0	1/1:20,2:14:2.92:17,3,0	0/1:7,0:5:3.37:45,0,3	./.	0/0:27,2:21:0.47:0,0,1	1/1:19,0:13:0.46:35,0,0	0/0:15,0:9:0:0,0,0	0/0:21,0:15:0:0,0,0	0/1:11,0:10:0:0,0,0	0/1:18,1:17:4.85:5,0,123	0/1:8,0:6:13.72:14,0,57	0/1:21,0:9:39.92:62,0,40	0/0:2,0:1:3.01:0,3,35	0/0:86,0:47:0:0,0,0	./.	./.	0/1:28,0:18:0:1,0,0	0/0:11,0:4:0:0,0,0	0/1:27,1:20:99:253,0,160	0/0:7,0:4:3.47:0,3,29	1/1:4,0:2:5.06:21,5,0
chr10	91837209	.	C	CAG	82.46	PASS	AB=0.980;AC=14;AF=0.350;AN=40;BaseQRankSum=0.605;DP=454;FS=5.298;HRun=0;HaplotypeScore=82.1449;InbreedingCoeff=0.0473;MQ=21.53;MQ0=97;MQRankSum=-0.347;QD=0.41;ReadPosRankSum=0.942;VQSLOD=1.1184;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:17:0.01:0,0,0	./.	./.	./.	./.	0/0:7,0:4:0:0,0,0	0/1:26,1:13:0.13:0,0,1	0/1:21,0:9:16.58:17,0,36	1/1:22,0:14:2.88:30,3,0	0/1:6,1:5:40.87:41,0,52	./.	1/1:30,0:21:2.15:7,2,0	0/0:18,1:13:4.91:0,5,31	0/0:15,0:9:0:0,0,0	./.	./.	0/0:19,0:17:14.39:0,14,123	0/0:9,0:6:2.21:0,2,74	0/1:20,0:9:10.01:13,0,10	0/0:2,0:1:2.96:0,3,19	0/0:86,0:47:10.45:0,10,47	./.	0/0:9,1:6:0:0,0,0	0/0:27,1:18:0.47:0,0,1	0/1:10,0:4:0:0,0,0	0/1:27,0:20:43.85:44,0,174	0/1:7,0:4:16.67:17,0,30	1/1:4,0:2:0.86:15,1,0
chr10	91837210	.	ACGCG	A	1088.69	PASS	AB=0.873;AC=23;AF=0.548;AN=42;BaseQRankSum=1.965;DP=440;FS=26.942;HRun=0;HaplotypeScore=71.4765;InbreedingCoeff=0.1482;MQ=21.46;MQ0=93;MQRankSum=0.546;QD=3.92;ReadPosRankSum=-2.337;VQSLOD=-0.1216;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,4:17:0:0,0,0	./.	./.	./.	./.	0/1:6,0:4:0.01:0,0,0	1/1:27,0:13:0.89:2,1,0	1/1:14,5:9:20.95:337,21,0	1/1:17,4:14:3.01:33,3,0	1/1:7,0:5:10.57:113,11,0	./.	0/1:27,3:21:0.10:0,0,0	1/1:17,1:13:3.30:45,3,0	0/0:14,0:9:0:0,0,0	0/0:21,1:15:0:0,0,0	0/1:9,1:10:0:0,0,0	0/1:15,3:16:31.21:31,0,148	0/1:8,1:6:47.43:47,0,69	1/1:14,2:6:10.28:140,10,0	0/0:2,0:1:3.01:0,3,54	0/0:60,14:42:0.28:0,0,0	./.	./.	0/1:27,1:18:0.05:0,0,0	0/0:10,0:4:0:0,0,0	0/1:13,14:20:99:380,0,155	0/1:7,0:4:6.83:10,0,7	1/1:4,0:2:5.91:48,6,0
chr10	91837212	.	GCGCA	G	630.35	PASS	AB=0.930;AC=18;AF=0.450;AN=40;BaseQRankSum=1.966;DP=438;FS=22.784;HRun=0;HaplotypeScore=70.1996;InbreedingCoeff=0.0962;MQ=21.23;MQ0=95;MQRankSum=-0.337;QD=2.85;ReadPosRankSum=-0.942;VQSLOD=-0.0452;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	0/1:8,0:4:0.01:0,0,0	0/1:25,2:13:0.01:0,0,0	1/1:20,0:9:18.84:189,19,0	1/1:21,0:13:2.84:14,3,0	0/1:7,1:5:2.98:80,0,3	./.	0/0:28,0:19:0.47:0,0,1	0/1:17,1:13:4.95:25,0,5	0/0:14,2:9:0:0,0,0	0/0:22,0:15:0:0,0,0	0/1:11,1:11:0:0,0,0	0/1:19,0:16:2.08:2,0,188	0/1:6,2:5:53.64:54,0,77	1/1:14,0:5:8.86:76,9,0	0/0:2,0:1:3.01:0,3,66	0/0:78,0:40:0.41:0,0,1	./.	./.	0/1:22,5:18:0:1,0,0	0/0:10,0:4:0:0,0,0	0/1:26,1:20:99:264,0,150	0/1:6,0:4:4.58:5,0,25	1/1:4,0:2:3.76:18,4,0
chr10	91837225	.	C	CAT	328.44	PASS	AB=0.987;AC=13;AF=0.325;AN=40;BaseQRankSum=-1.479;DP=503;FS=5.455;HRun=0;HaplotypeScore=76.2592;InbreedingCoeff=0.0408;MQ=21.03;MQ0=112;MQRankSum=-1.154;QD=1.07;ReadPosRankSum=0.864;VQSLOD=0.6967;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,1:18:0:1,0,0	./.	./.	./.	./.	0/1:8,0:4:0:0,0,0	0/1:36,0:17:0.14:0,0,0	1/1:21,0:11:12.07:255,12,0	0/0:18,1:12:0.89:0,1,2	0/1:11,0:4:3.35:3,0,38	./.	1/1:33,1:20:0.40:1,0,0	0/0:20,0:13:0.42:0,0,60	0/0:24,0:14:0:0,0,0	./.	./.	0/1:21,1:18:41.25:41,0,215	0/0:8,0:6:6.02:0,6,80	0/1:21,0:10:21.84:22,0,59	0/0:4,0:3:2.99:0,3,48	0/1:83,1:43:0:1,0,0	./.	0/0:10,0:6:0:0,0,0	0/0:29,0:19:0.47:0,0,1	0/0:10,0:6:0:0,0,0	0/1:33,0:19:79.78:80,0,155	0/1:6,0:3:16.74:17,0,34	0/0:7,0:5:0.33:0,0,4
chr10	91837236	.	ACG	A	264.04	PASS	AB=0.955;AC=19;AF=0.432;AN=44;BaseQRankSum=2.002;DP=522;FS=15.746;HRun=0;HaplotypeScore=88.0716;InbreedingCoeff=0.1134;MQ=21.29;MQ0=125;MQRankSum=0.461;QD=0.93;ReadPosRankSum=-0.778;VQSLOD=0.5136;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:31,2:23:0.40:0,0,0	./.	./.	./.	0/0:12,3:11:0:0,0,0	0/1:8,0:4:0.02:0,0,0	0/1:36,0:18:3.81:4,0,13	0/0:23,0:11:13.17:0,13,226	1/1:18,1:11:3.01:35,3,0	0/1:13,0:5:1.11:61,0,1	0/1:2,0:2:0:0,0,0	1/1:30,1:19:0.02:0,0,0	0/1:18,0:12:4.17:18,0,4	0/0:28,0:16:0:0,0,0	./.	0/1:10,0:12:0:0,0,0	0/1:25,0:20:18.92:19,0,138	0/0:9,0:6:5.05:0,5,62	0/1:25,0:13:39.68:54,0,40	0/0:2,2:3:2.72:0,3,49	0/0:85,0:46:0.26:0,0,0	./.	./.	0/0:29,0:19:0.37:0,0,0	0/1:11,0:7:0:0,0,0	0/1:31,2:20:94.18:94,0,102	1/1:5,0:2:2.88:15,3,0	1/1:5,3:5:8.66:64,9,0
chr10	91837252	.	A	ATG	479.33	PASS	AB=0.972;AC=11;AF=0.250;AN=44;BaseQRankSum=1.250;DP=442;FS=6.428;HRun=0;HaplotypeScore=87.6595;InbreedingCoeff=0.0444;MQ=22.91;MQ0=91;MQRankSum=1.313;QD=1.93;ReadPosRankSum=0.788;VQSLOD=1.2272;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,2:22:0:0,0,0	./.	./.	./.	0/0:13,0:12:0:0,0,0	0/0:10,0:5:0:0,0,0	0/1:32,0:19:30.41:34,0,30	0/0:11,0:5:9.02:0,9,122	0/0:15,0:10:0.47:0,0,2	0/1:13,0:5:76.80:77,0,97	0/1:5,0:5:0.10:0,0,0	0/1:24,2:18:0:0,0,0	0/1:15,0:10:13.02:13,0,76	0/0:20,0:13:0:0,0,0	./.	0/0:11,0:11:0:0,0,0	0/0:23,0:21:1.84:0,2,227	0/0:7,0:6:3.01:0,3,41	0/1:15,1:6:36.55:37,0,124	0/0:3,0:3:2.99:0,3,47	0/1:71,0:40:0.02:0,0,0	./.	./.	0/0:22,0:14:0.47:0,0,1	0/0:11,0:7:0:0,0,0	0/1:31,2:19:99:276,0,298	0/0:6,0:4:3.01:0,3,46	1/1:6,1:5:9.03:138,9,0
chr10	91837258	.	ACG	A	557.70	PASS	AB=0.961;AC=24;AF=0.545;AN=44;BaseQRankSum=0.779;DP=403;FS=7.464;HRun=0;HaplotypeScore=79.2109;InbreedingCoeff=0.0259;MQ=24.22;MQ0=72;MQRankSum=-0.200;QD=1.79;ReadPosRankSum=-0.180;VQSLOD=0.7186;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,1:20:0.28:0,0,1	./.	./.	./.	0/0:7,5:11:0:0,0,0	1/1:12,0:6:3:25,3,0	0/1:26,1:18:41.48:57,0,41	1/1:11,0:6:8.92:61,9,0	./.	0/1:13,0:8:6.11:80,0,6	1/1:5,0:5:3:25,3,0	0/1:24,0:17:0.15:0,0,0	0/1:14,0:9:14.33:26,0,14	0/0:19,0:13:0:0,0,0	./.	0/1:9,0:9:0:0,0,0	0/1:19,0:17:5.43:5,0,110	1/1:8,1:8:3.46:23,3,0	0/1:13,0:5:25.57:26,0,45	0/0:1,2:3:2.70:0,3,23	0/1:65,2:42:0.17:0,0,0	./.	0/1:8,1:6:0:0,0,0	0/0:18,3:14:0.34:0,0,1	0/1:8,1:6:0:0,0,0	0/1:25,6:19:34.84:219,0,35	1/1:6,0:5:5.65:31,6,0	1/1:3,4:5:8.51:80,9,0
chr10	91837272	.	A	ACG	243.37	PASS	AB=0.964;AC=14;AF=0.280;AN=50;BaseQRankSum=-0.743;DP=390;FS=0.000;HRun=0;HaplotypeScore=84.6236;InbreedingCoeff=0.2864;MQ=33.23;MQ0=46;MQRankSum=-1.696;QD=1.61;ReadPosRankSum=1.917;VQSLOD=1.2519;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:18:0:1,0,0	0/0:5,0:3:4.99:0,5,18	0/0:16,0:8:11.99:0,12,106	0/0:12,0:7:14.46:0,14,120	0/1:14,0:13:0:0,0,0	0/0:10,0:5:2.94:0,3,18	0/1:22,2:18:1.44:46,0,1	0/0:14,0:10:25.55:0,26,137	0/0:12,0:8:2.92:0,3,17	1/1:16,0:15:2.35:184,2,0	1/1:6,0:5:3.01:46,3,0	0/0:18,0:15:5.30:0,5,25	0/1:17,0:14:4.74:13,0,5	0/0:18,0:14:0:0,0,0	./.	0/0:8,0:8:0:0,0,0	0/1:14,0:12:8.90:9,0,38	1/1:6,1:6:5.97:45,6,0	0/0:15,0:8:15.30:0,15,73	0/0:6,0:6:2.94:0,3,20	0/0:53,0:38:2.90:0,3,17	./.	./.	0/1:14,2:11:0.05:0,0,0	0/1:8,1:8:0:0,0,0	0/0:17,0:12:23.61:0,24,135	0/1:8,0:7:17.93:18,0,25	0/0:7,0:4:8.59:0,9,50
chr10	91837274	.	A	ACG	526.14	PASS	AB=0.936;AC=24;AF=0.480;AN=50;BaseQRankSum=-0.125;DP=397;FS=4.205;HRun=0;HaplotypeScore=88.2961;InbreedingCoeff=0.3034;MQ=36.97;MQ0=41;MQRankSum=-2.147;QD=2.10;ReadPosRankSum=2.562;VQSLOD=1.2682;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,3:17:0:1,0,0	1/1:5,0:3:6.01:56,6,0	0/0:19,0:11:23.97:0,24,217	0/0:15,0:8:20.58:0,21,185	0/1:11,4:15:0:0,0,0	0/0:12,0:6:5.99:0,6,65	0/0:23,0:18:4.63:0,5,47	1/1:13,1:10:26.02:161,26,0	1/1:11,0:7:2.74:12,3,0	0/1:15,0:14:25.96:56,0,26	0/1:7,0:6:0.11:0,0,0	0/1:17,0:15:11.85:12,0,12	0/0:15,0:13:8.76:0,9,52	0/0:18,0:15:0:0,0,0	./.	0/0:7,0:7:0:0,0,0	0/1:13,1:12:0.94:53,0,1	0/1:7,0:6:2.74:11,0,3	1/1:16,1:10:14.16:143,14,0	0/0:4,2:6:2.94:0,3,20	0/1:51,2:40:3.72:12,0,4	./.	./.	1/1:16,0:11:0.43:1,0,0	0/1:10,0:9:0:0,0,0	0/1:13,4:12:5.82:47,0,6	1/1:7,0:7:7.56:46,8,0	1/1:3,4:4:8.36:48,8,0
chr10	91837286	.	ACG	A	3140.01	PASS	AB=0.683;AC=43;AF=0.796;AN=54;BaseQRankSum=2.334;DP=412;FS=18.829;HRun=0;HaplotypeScore=78.8921;InbreedingCoeff=0.3937;MQ=49.07;MQ0=22;MQRankSum=-5.512;QD=9.15;ReadPosRankSum=3.351;VQSLOD=1.8049;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:18:2.84:45,3,0	1/1:3,1:3:6.02:72,6,0	0/0:23,0:15:39.01:0,39,609	0/0:22,0:15:45.04:0,45,658	1/1:0,16:16:5.59:90,6,0	1/1:4,8:8:6.02:92,6,0	0/1:17,8:21:0.78:138,0,1	1/1:2,13:14:39.09:521,39,0	1/1:7,1:7:3.01:44,3,0	1/1:0,16:15:39.05:487,39,0	1/1:5,2:6:3.01:35,3,0	1/1:17,1:16:2.97:45,3,0	1/1:5,7:11:7.58:93,8,0	1/1:6,13:17:2.85:46,3,0	./.	0/1:8,0:8:0:0,0,0	1/1:11,3:13:2.43:213,2,0	1/1:4,4:8:18.05:237,18,0	1/1:14,6:16:29.60:467,30,0	0/1:0,5:5:0.29:0,0,0	1/1:17,37:46:8.47:136,8,0	0/0:0,12:12:0:0,0,0	0/1:1,7:7:0:0,0,0	1/1:14,4:15:2.48:45,2,0	0/1:4,6:10:0:0,0,0	1/1:10,4:10:3.14:241,3,0	1/1:1,7:8:9.01:101,9,0	1/1:2,4:5:9.03:111,9,0
chr10	91837613	.	TTTA	T	7207.68	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=1.263;DP=266;FS=1.758;HRun=0;HaplotypeScore=61.8234;InbreedingCoeff=0.5771;MQ=54.12;MQ0=0;MQRankSum=-1.316;QD=28.72;ReadPosRankSum=3.137;VQSLOD=5.0419;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:18:27.09:428,27,0	1/1:0,4:4:6.02:95,6,0	0/0:9,0:5:13.86:0,14,210	0/0:6,0:3:3.01:0,3,61	1/1:0,15:15:27.09:422,27,0	1/1:3,15:17:33.11:523,33,0	1/1:0,3:3:3.01:48,3,0	1/1:3,7:10:18.05:242,18,0	1/1:0,7:7:12.04:190,12,0	1/1:0,12:12:36.12:567,36,0	1/1:3,8:11:15.04:210,15,0	./.	1/1:1,8:9:21.07:333,21,0	1/1:0,7:7:15.05:238,15,0	1/1:0,7:7:6.02:95,6,0	1/1:1,8:9:15.05:238,15,0	1/1:2,13:15:18.06:285,18,0	1/1:1,9:10:18.06:280,18,0	1/1:3,10:12:24.07:352,24,0	1/1:4,15:18:33.11:523,33,0	1/1:1,1:2:6.01:75,6,0	1/1:0,3:3:3.01:48,3,0	1/1:1,5:6:12.04:185,12,0	1/1:0,4:4:12.04:190,12,0	1/1:2,9:11:21.07:333,21,0	1/1:0,17:17:48.15:738,48,0	1/1:2,8:10:18.06:285,18,0	1/1:1,10:11:18.06:285,18,0
chr10	91837796	.	A	AAATTGTG	14432.24	PASS	AB=0.649;AC=19;AF=0.339;AN=56;BaseQRankSum=-1.034;DP=558;FS=17.698;HRun=0;HaplotypeScore=171.6012;InbreedingCoeff=0.9067;MQ=60.67;MQ0=0;MQRankSum=-14.231;QD=75.96;ReadPosRankSum=-5.254;VQSLOD=2.7167;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.30:0,87,2090	0/0:4,0:4:12.04:0,12,300	0/0:24,0:21:45.13:0,45,1009	0/0:17,0:14:39.13:0,39,847	1/1:6,9:17:48.16:1534,48,0	0/0:22,0:21:51.18:0,51,1270	0/0:28,0:28:63.22:0,63,1569	1/1:18,14:29:51.15:1493,51,0	1/1:5,14:19:54.18:1860,54,0	0/0:18,0:18:48.16:0,48,1151	0/0:11,0:11:24.08:0,24,599	1/1:5,8:12:30.10:1048,30,0	0/0:18,0:17:39.13:0,39,953	0/0:19,0:19:30.10:0,30,701	0/0:37,0:37:99:0,102,2438	0/0:32,0:32:63.15:0,63,1387	0/0:30,0:30:75.26:0,75,1854	0/0:20,0:20:45.15:0,45,1090	1/1:6,4:9:18.04:569,18,0	1/1:9,15:24:57.19:2034,57,0	1/1:10,6:15:23.78:663,24,0	0/0:9,0:9:18.06:0,18,446	0/0:8,0:8:15.05:0,15,374	0/0:26,0:26:33.07:0,33,769	0/0:13,0:13:15.05:0,15,374	0/1:11,13:24:13.21:2163,0,13	1/1:9,19:27:75.26:2601,75,0	1/1:0,4:4:12.04:466,12,0
chr10	91837845	.	GTGTGTGTA	G	10125.72	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=8.401;DP=646;FS=3.813;HRun=0;HaplotypeScore=202.8261;InbreedingCoeff=0.8030;MQ=47.34;MQ0=15;MQRankSum=-7.607;QD=23.55;ReadPosRankSum=-1.075;VQSLOD=4.2190;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:53.61:0,54,2559	0/0:9,0:9:27.09:0,27,781	0/0:21,0:16:11.89:0,12,307	0/0:20,0:9:6.02:0,6,78	1/1:10,10:19:22.43:550,22,0	1/1:5,12:17:16.88:367,17,0	1/1:5,25:30:6.02:133,6,0	1/1:47,0:31:39.07:578,39,0	1/1:16,8:23:21.61:651,22,0	1/1:4,27:31:72.18:1462,72,0	1/1:10,1:10:6.02:134,6,0	1/1:11,7:16:25.20:534,25,0	1/1:3,18:20:21.96:552,22,0	1/1:2,14:16:3.48:80,3,0	0/0:46,0:46:90.31:0,90,2953	1/1:4,26:30:18.95:468,19,0	0/0:38,0:38:73.54:0,74,2285	1/1:4,13:17:12.01:220,12,0	1/1:9,2:7:12.04:250,12,0	1/1:9,10:19:30.10:707,30,0	1/1:31,2:27:15.89:263,16,0	1/1:2,12:14:10.80:240,11,0	1/1:1,10:11:18.06:473,18,0	0/0:6,29:35:1.11:0,1,16	1/1:2,10:12:9.03:236,9,0	1/1:20,5:23:54.18:1158,54,0	1/1:9,12:20:42.14:992,42,0	1/1:2,0:2:3.01:79,3,0
chr10	91837989	.	C	CTG	13328.62	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-14.894;DP=778;FS=8.655;HRun=0;HaplotypeScore=133.7862;InbreedingCoeff=0.9873;MQ=58.35;MQ0=5;MQRankSum=0.330;QD=30.50;ReadPosRankSum=3.834;VQSLOD=6.9198;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,32:38:69.02:1109,69,0	1/1:2,6:8:18.06:286,18,0	0/0:28,0:24:48.04:0,48,514	0/0:25,0:19:35.32:0,35,416	1/1:4,20:22:45.15:745,45,0	0/0:17,0:16:36.11:0,36,451	0/0:28,0:28:63.12:0,63,776	1/1:25,19:41:93.31:1506,93,0	1/1:3,36:40:81.28:1340,81,0	0/0:30,0:29:66.21:0,66,832	0/0:25,0:25:51.16:0,51,641	1/1:8,23:30:7.30:658,7,0	0/0:21,0:21:54.13:0,54,654	0/0:18,0:18:39.06:0,39,448	1/1:4,35:39:75.26:1246,75,0	0/0:35,0:35:81.26:0,81,1019	1/1:4,18:23:45.15:746,45,0	0/0:16,0:16:30.09:0,30,371	1/1:6,18:25:57.12:865,57,0	1/1:3,26:30:48.16:797,48,0	1/1:8,31:39:81.28:1347,81,0	0/0:23,0:23:48.12:0,48,588	0/0:22,0:22:48.14:0,48,592	0/0:36,0:36:96.25:0,96,1177	0/0:17,0:16:48.14:0,48,592	1/1:5,26:31:34.38:1096,34,0	1/1:5,32:37:72.25:1189,72,0	1/1:7,17:24:24.08:399,24,0
chr10	91838165	.	C	CAAAG	14503.22	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=1.759;DP=610;FS=7.446;HRun=0;HaplotypeScore=157.6574;InbreedingCoeff=0.9740;MQ=83.43;MQ0=0;MQRankSum=-14.038;QD=68.74;ReadPosRankSum=-1.974;VQSLOD=5.8468;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,172,3404	0/0:15,0:15:42.14:0,42,839	0/0:23,0:23:69.24:0,69,1343	0/0:25,0:25:72:0,72,1221	0/0:20,0:20:47.90:0,48,958	1/1:6,13:19:54.19:1450,54,0	1/1:6,14:21:60.21:1604,60,0	0/0:29,0:29:84.29:0,84,1676	0/0:29,0:29:84.27:0,84,1640	1/1:4,15:21:50.69:1362,51,0	1/1:3,6:10:24.08:592,24,0	0/0:17,0:17:48.16:0,48,958	1/1:2,21:24:66.23:1801,66,0	1/1:2,10:12:33.11:921,33,0	0/0:18,0:18:54.19:0,54,1079	1/1:3,18:23:3.29:1617,3,0	0/0:24,0:24:69.24:0,69,1378	1/1:2,11:14:39.13:1090,39,0	0/0:20,0:20:60.21:0,60,1183	0/0:29,0:29:75.26:0,75,1493	0/0:39,0:39:99:0,117,2277	1/1:3,15:19:54.19:1483,54,0	1/1:3,11:16:35.87:843,36,0	1/1:4,6:12:18.02:439,18,0	1/1:6,13:19:57.07:1300,57,0	0/0:33,0:33:90.31:0,90,1798	0/0:15,0:15:45.15:0,45,887	0/0:6,0:6:18.06:0,18,359
chr10	91838452	.	CACTA	C	1111.34	PASS	AB=0.591;AC=15;AF=0.288;AN=52;BaseQRankSum=6.724;DP=651;FS=28.798;HRun=0;HaplotypeScore=90.1180;InbreedingCoeff=0.7308;MQ=49.33;MQ0=79;MQRankSum=-5.733;QD=16.84;ReadPosRankSum=-0.691;VQSLOD=1.2560;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:10:30.10:0,30,807	0/0:2,0:2:6.02:0,6,151	0/0:51,0:6:12.04:0,12,248	0/0:41,0:5:6:0,6,85	./.	0/0:19,0:19:54.14:0,54,1362	0/0:52,0:46:99:0,132,3387	1/1:1,5:4:9.02:139,9,0	1/1:3,3:6:6.02:113,6,0	0/0:38,0:35:93.31:0,93,2448	0/0:33,0:30:78.67:0,79,1847	1/1:2,5:7:6.02:113,6,0	0/0:47,0:47:99:0,135,3268	0/0:50,0:49:99:0,144,3766	0/0:13,0:13:36.12:0,36,972	0/0:27,0:27:78.14:0,78,1818	0/0:16,0:16:48.14:0,48,1187	0/0:30,0:30:84.29:0,84,2250	1/1:1,4:4:6.02:106,6,0	./.	1/1:4,10:14:6.02:111,6,0	0/0:29,0:28:60.18:0,60,1488	0/0:33,0:29:81.22:0,81,2046	0/0:60,0:57:99:0,141,3692	0/0:21,0:17:51.18:0,51,1375	0/1:4,9:13:99:468,0,129	1/1:1,10:11:6.02:113,6,0	1/1:1,3:3:6.02:113,6,0
chr10	91838552	.	CGCCATCCCTGACCACTCACTAACTGTGACTCTGGGTTCT	C	2052	PASS	AB=0.759;AC=18;AF=0.346;AN=52;BaseQRankSum=8.422;DP=673;FS=27.760;HRun=0;HaplotypeScore=518.1651;InbreedingCoeff=0.7349;MQ=51.27;MQ0=59;MQRankSum=-6.529;QD=32.06;ReadPosRankSum=-4.441;VQSLOD=-0.3086;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:45.15:0,45,3709	0/0:5,0:5:15.05:0,15,1205	./.	./.	1/1:1,0:1:3.01:72,3,0	0/0:27,0:26:60.21:0,60,4510	0/0:54,0:51:96.31:0,96,4776	1/1:10,0:4:9.03:160,9,0	1/1:4,0:4:6.02:182,6,0	0/0:56,0:47:93.32:0,93,6762	0/0:23,0:20:39.13:0,39,3204	1/1:7,0:7:18.06:474,18,0	0/0:43,0:43:87.30:0,87,6840	0/0:58,0:57:99:0,132,10383	0/0:11,0:11:33.11:0,33,3161	0/0:29,0:29:75.26:0,75,5629	0/0:12,0:12:36.12:0,36,2958	0/0:33,0:33:84.25:0,84,6136	0/1:3,0:3:0:0,0,0	1/1:2,0:2:6.02:195,6,0	1/1:19,0:16:5.66:109,6,0	0/0:46,0:46:75.24:0,75,4823	0/0:26,0:25:57.15:0,57,3894	0/0:62,0:59:99:0,114,8807	0/0:35,0:29:48.10:0,48,2199	0/1:1,14:15:99:734,0,218	1/1:1,0:1:3.01:104,3,0	1/1:2,0:2:6.02:192,6,0
chr10	91838569	.	CACTA	C	209.83	PASS	AB=0.933;AC=6;AF=0.107;AN=56;BaseQRankSum=3.503;DP=682;FS=6.614;HRun=0;HaplotypeScore=124.3439;InbreedingCoeff=0.3760;MQ=49.68;MQ0=78;MQRankSum=-4.020;QD=4.04;ReadPosRankSum=-1.446;VQSLOD=1.6372;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:75.23:0,75,1911	0/0:6,0:6:18.06:0,18,476	0/0:47,0:4:6.01:0,6,70	0/0:35,0:5:5.94:0,6,42	0/0:7,0:7:2.97:0,3,20	0/0:27,0:26:75.26:0,75,1934	0/0:40,0:38:99:0,102,2525	1/1:2,3:4:9.03:160,9,0	0/0:8,0:8:15.02:0,15,255	0/0:51,0:43:99:0,117,2967	0/0:24,0:20:48.12:0,48,1156	0/1:11,2:13:20.76:21,0,230	0/0:42,0:42:99:0,114,2954	0/0:54,0:52:99:0,150,3866	0/0:14,0:14:42.14:0,42,1112	0/0:27,0:27:81.28:0,81,2119	0/0:16,0:16:48.16:0,48,1295	0/0:34,0:34:93.28:0,93,2399	0/0:3,0:3:2.98:0,3,22	0/0:4,0:4:6.02:0,6,120	1/1:5,14:17:5.23:110,5,0	0/0:42,0:42:96.27:0,96,2342	0/0:31,0:29:69.18:0,69,1700	0/0:55,0:52:99:0,120,3157	0/0:31,0:25:66.12:0,66,1518	0/1:15,0:15:39.60:40,0,166	0/0:5,0:5:9.02:0,9,123	0/0:2,0:2:6.02:0,6,117
chr10	91840923	.	GTTGT	G	17301.28	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.590;DP=627;FS=2.213;HRun=0;HaplotypeScore=106.4246;InbreedingCoeff=0.9630;MQ=69.71;MQ0=4;MQRankSum=1.781;QD=29.98;ReadPosRankSum=5.052;VQSLOD=4.6089;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:26:51.65:838,52,0	1/1:5,7:12:15.05:247,15,0	0/0:26,1:17:15:0,15,289	0/0:23,0:20:27.08:0,27,531	1/1:12,18:30:57.10:839,57,0	1/1:4,15:19:36.12:591,36,0	1/1:5,16:21:29.85:464,30,0	1/1:16,17:32:48.12:737,48,0	1/1:2,13:15:30.10:493,30,0	1/1:10,11:21:33.10:518,33,0	1/1:7,14:21:33.07:513,33,0	1/1:5,15:20:33.11:526,33,0	1/1:2,13:15:39.13:641,39,0	1/1:6,12:18:30.10:493,30,0	1/1:0,17:17:51.17:838,51,0	1/1:5,12:17:24.08:395,24,0	1/1:5,25:30:57.19:937,57,0	1/1:7,19:26:12.27:750,12,0	1/1:12,7:19:21.02:292,21,0	1/1:7,17:23:48.16:773,48,0	1/1:5,11:16:24.08:395,24,0	1/1:0,20:20:54.18:886,54,0	1/1:7,20:27:44.67:739,45,0	1/1:3,32:35:72.25:1182,72,0	1/1:4,20:24:42.10:661,42,0	1/1:5,27:32:75.18:1135,75,0	1/1:5,20:25:54.10:829,54,0	1/1:1,13:14:36.12:592,36,0
chr10	91841295	.	AC	A	12348.21	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.496;DP=587;FS=8.203;HRun=9;HaplotypeScore=66.9747;InbreedingCoeff=0.9822;MQ=83.89;MQ0=0;MQRankSum=-6.344;QD=22.45;ReadPosRankSum=5.074;VQSLOD=5.3861;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,26:34:72.03:658,72,0	1/1:0,9:9:27.01:247,27,0	0/0:14,0:15:15.65:0,16,221	0/0:22,0:22:25.73:0,26,281	1/1:4,18:22:53.98:487,54,0	1/1:3,18:21:48.02:439,48,0	1/1:2,21:23:63.02:572,63,0	1/1:6,19:25:50.98:462,51,0	1/1:6,16:22:63.03:575,63,0	1/1:3,16:19:54.03:492,54,0	1/1:4,14:18:45.02:411,45,0	1/1:3,23:26:75.04:685,75,0	1/1:1,18:19:51.03:467,51,0	1/1:2,13:15:39:351,39,0	1/1:8,15:23:54.02:494,54,0	1/1:5,20:25:60.03:549,60,0	1/1:4,19:23:57.03:522,57,0	1/1:2,7:9:24.01:219,24,0	1/1:8,15:24:56.06:498,56,0	1/1:2,21:23:51.01:466,51,0	1/1:4,22:26:63.03:576,63,0	1/1:4,17:21:54.03:494,54,0	1/1:5,23:28:65.76:603,66,0	1/1:7,20:27:63.03:575,63,0	1/1:3,16:19:48.03:439,48,0	1/1:4,18:22:60.03:548,60,0	1/1:1,14:15:42.02:384,42,0	1/1:7,5:12:15:135,15,0
chr10	91842398	.	A	AT	889.62	PASS	AB=0.919;AC=20;AF=0.370;AN=54;BaseQRankSum=4.990;DP=213;FS=4.881;HRun=1;HaplotypeScore=47.6107;InbreedingCoeff=0.3437;MQ=68.90;MQ0=1;MQRankSum=-2.148;QD=8.55;ReadPosRankSum=1.669;VQSLOD=1.1741;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:23.98:198,24,0	0/0:4,0:4:10.11:0,10,47	0/0:8,0:7:15.88:0,16,188	0/1:9,0:4:4.51:5,0,35	0/0:12,0:12:6.49:0,6,119	0/1:5,3:7:1.83:44,0,2	./.	0/0:21,0:21:26.55:0,27,191	0/0:8,0:8:22.84:0,23,123	0/1:6,1:7:13.76:35,0,14	0/1:4,2:6:1.08:50,0,1	0/1:3,0:3:16.27:16,0,19	0/1:2,0:2:0:0,0,0	1/1:1,2:3:5.88:35,6,0	1/1:1,3:4:11.93:92,12,0	0/0:3,0:3:5.60:0,6,26	1/1:10,15:25:1.09:368,1,0	1/1:11,6:17:2.13:159,2,0	0/0:13,0:13:28.42:0,28,116	0/1:8,0:8:2:2,0,85	0/0:10,0:10:28.48:0,28,142	0/1:2,0:2:7.16:19,0,7	0/0:2,0:2:5.60:0,6,26	1/1:2,0:2:2.99:24,3,0	0/0:3,0:3:4.78:0,5,22	0/0:2,0:2:5.49:0,5,24	0/0:5,0:5:11.24:0,11,58	0/0:18,0:18:34.98:0,35,181
chr10	91842399	.	A	AT	711.67	PASS	AB=0.789;AC=13;AF=0.250;AN=52;BaseQRankSum=8.066;DP=208;FS=0.000;HRun=0;HaplotypeScore=47.4949;InbreedingCoeff=0.2761;MQ=69.00;MQ0=1;MQRankSum=-2.207;QD=7.82;ReadPosRankSum=4.472;VQSLOD=3.1897;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:23.98:198,24,0	0/0:4,0:4:9.80:0,10,45	0/0:8,0:7:17.24:0,17,191	0/1:9,0:4:4.12:4,0,31	0/0:12,0:12:10.33:0,10,133	1/1:5,0:7:8.85:55,9,0	./.	0/0:20,0:20:52.95:0,53,226	0/0:8,0:8:22.84:0,23,123	0/1:6,0:7:20.55:32,0,21	0/1:3,0:5:4.47:28,0,4	0/0:2,0:2:5.68:0,6,28	0/0:2,0:2:2.84:0,3,14	1/1:1,0:3:5.88:35,6,0	0/1:1,3:4:1.18:56,0,1	0/0:3,0:3:5.60:0,6,26	0/1:9,15:24:3.21:330,0,3	0/1:12,2:18:25.20:114,0,25	0/0:13,0:13:28.11:0,28,115	0/0:7,0:7:16.47:0,16,93	0/0:10,0:10:28.48:0,28,142	0/0:2,0:2:5.60:0,6,26	0/0:2,0:2:5.60:0,6,26	./.	0/0:3,0:3:4.78:0,5,22	0/0:2,0:2:5.49:0,5,24	0/1:5,0:5:10.56:11,0,43	0/0:18,0:18:50.65:0,51,259
chr10	91843464	.	T	TCTGAGGG	45045.22	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.504;DP=547;FS=2.204;HRun=0;HaplotypeScore=111.1801;InbreedingCoeff=0.9518;MQ=69.06;MQ0=0;MQRankSum=-10.006;QD=89.38;ReadPosRankSum=4.188;VQSLOD=5.6333;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,15:25:54.18:1871,54,0	1/1:0,4:5:12.04:476,12,0	0/0:24,0:24:61.27:0,61,1395	0/0:19,0:19:50.72:0,51,1268	1/1:10,15:26:45.15:1774,45,0	1/1:5,13:19:51.18:2026,51,0	1/1:8,12:19:45.15:1762,45,0	1/1:7,11:21:57.13:1762,57,0	1/1:3,11:14:42.14:1589,42,0	1/1:7,20:29:81.28:3135,81,0	1/1:5,10:19:33.11:1293,33,0	1/1:4,9:15:36.12:1357,36,0	1/1:8,15:25:63.22:2385,63,0	1/1:5,6:14:33.11:1306,33,0	1/1:4,22:24:63.22:2448,63,0	1/1:4,8:12:33.11:1305,33,0	1/1:8,12:24:51.18:1992,51,0	1/1:1,9:12:24.08:878,24,0	1/1:8,9:20:26.14:1483,26,0	1/1:4,13:17:51.17:1943,51,0	1/1:12,16:29:57.20:2262,57,0	1/1:5,18:25:60.21:2308,60,0	1/1:6,8:14:30.10:1190,30,0	1/1:6,4:10:21.07:836,21,0	1/1:7,13:20:57.20:2206,57,0	1/1:10,20:29:81.19:2947,81,0	1/1:4,15:20:54.19:2150,54,0	1/1:1,3:4:9.03:359,9,0
chr10	91843722	.	CTGTGTG	C	1198.70	PASS	AB=0.917;AC=35;AF=0.795;AN=44;BaseQRankSum=-0.147;DP=541;FS=7.014;HRun=0;HaplotypeScore=113.9923;InbreedingCoeff=0.2154;MQ=60.52;MQ0=11;MQRankSum=-0.737;QD=3.52;ReadPosRankSum=-0.324;VQSLOD=1.4579;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:0.03:0,0,0	1/1:4,0:7:3.01:42,3,0	0/0:18,0:14:0:0,0,0	./.	./.	1/1:12,6:17:6:74,6,0	1/1:14,1:14:2.77:59,3,0	0/0:23,0:19:0.47:0,0,1	1/1:12,4:16:2.58:52,3,0	./.	1/1:8,0:10:3.01:42,3,0	1/1:17,5:22:6.02:104,6,0	1/1:10,0:15:3.01:42,3,0	0/0:24,0:24:2.99:0,3,24	1/1:12,0:13:7.60:57,8,0	1/1:11,6:17:12:166,12,0	0/1:18,0:25:14.90:35,0,15	1/1:16,0:19:6.02:84,6,0	./.	1/1:13,6:20:8.39:124,8,0	./.	1/1:17,0:20:3.01:42,3,0	./.	1/1:15,0:17:0.26:1,0,0	0/1:11,0:11:0:0,0,0	1/1:21,3:22:6.02:120,6,0	1/1:13,4:18:14.41:190,14,0	1/1:8,4:12:3.01:60,3,0
chr10	91844458	.	A	AT	17323.85	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.700;DP=610;FS=11.208;HRun=7;HaplotypeScore=54.1088;InbreedingCoeff=0.9154;MQ=70.52;MQ0=0;MQRankSum=-7.166;QD=29.82;ReadPosRankSum=3.679;VQSLOD=4.6927;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,39:43:93.21:1098,93,0	1/1:0,2:2:3.01:36,3,0	0/0:14,0:13:30.04:0,30,286	0/0:15,0:14:33.05:0,33,314	1/1:3,28:31:87.26:1037,87,0	1/1:1,17:18:42.13:507,42,0	1/1:4,21:25:57.17:689,57,0	1/1:1,21:22:60.13:696,60,0	1/1:0,16:16:30.09:362,30,0	1/1:4,21:25:66.16:781,66,0	1/1:1,15:17:42.09:487,42,0	1/1:3,19:22:54.17:652,54,0	1/1:3,18:21:57.17:685,57,0	1/1:2,18:20:54.17:652,54,0	1/1:3,25:28:69.21:833,69,0	1/1:5,16:21:42.13:507,42,0	1/1:3,28:31:69.21:833,69,0	1/1:1,25:27:65.95:756,66,0	1/1:2,15:17:45.14:543,45,0	1/1:1,23:24:69.01:763,69,0	1/1:4,23:27:60.18:722,60,0	1/1:0,13:13:39.07:454,39,0	1/1:2,14:16:39.04:451,39,0	1/1:1,22:23:63.19:761,63,0	1/1:1,16:17:45.14:544,45,0	1/1:2,34:36:99:1208,102,0	1/1:2,27:28:78.24:940,78,0	1/1:1,9:10:27.08:326,27,0
chr10	91844614	.	TTG	T	10095.14	PASS	AB=0.563;AC=43;AF=0.768;AN=56;BaseQRankSum=-4.146;DP=704;FS=1.312;HRun=0;HaplotypeScore=100.7372;InbreedingCoeff=0.8485;MQ=70.79;MQ0=7;MQRankSum=4.058;QD=19.68;ReadPosRankSum=5.671;VQSLOD=4.9608;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:37:12:0,12,105	0/0:5,0:9:5.99:0,6,49	0/0:56,0:32:40.49:0,40,514	0/0:48,0:33:32.63:0,33,406	1/1:6,21:28:60.18:696,60,0	1/1:7,11:18:33.10:380,33,0	1/1:9,18:28:29.92:329,30,0	1/1:11,16:27:48.03:484,48,0	1/1:5,16:22:41.24:468,41,0	1/1:6,14:21:4.01:492,4,0	1/1:7,11:18:23.90:259,24,0	1/1:4,17:20:33.10:384,33,0	1/1:6,20:27:44.96:504,45,0	1/1:5,15:20:42.12:490,42,0	0/0:13,0:15:14.99:0,15,130	1/1:4,8:11:15.04:175,15,0	0/0:19,0:24:9.19:0,9,60	1/1:13,22:36:60.01:679,60,0	1/1:8,11:19:33.10:382,33,0	1/1:10,15:26:44.80:483,45,0	1/1:7,20:30:44.63:462,45,0	1/1:4,11:16:29.92:329,30,0	1/1:3,17:20:32.85:385,33,0	1/1:6,31:37:81.24:945,81,0	1/1:4,11:15:30.09:350,30,0	1/1:10,13:23:35.94:399,36,0	0/1:4,13:18:5.06:392,0,5	1/1:9,20:29:54.15:630,54,0
chr10	91845510	.	C	CG	126.64	PASS	AC=12;AF=0.750;AN=16;BaseQRankSum=-2.520;DP=25;FS=9.622;HRun=6;HaplotypeScore=16.3610;MQ=133.27;MQ0=1;MQRankSum=-2.520;QD=11.51;ReadPosRankSum=-1.246;VQSLOD=0.0311;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:5,0:3:5.96:0,6,49	0/0:5,0:3:5.54:0,6,25	./.	./.	1/1:1,0:1:2.99:24,3,0	./.	./.	./.	1/1:1,0:1:3:25,3,0	./.	./.	./.	./.	./.	./.	./.	1/1:2,0:2:3.01:37,3,0	./.	1/1:2,3:5:6.02:75,6,0	1/1:1,0:1:3:26,3,0	./.	./.	1/1:1,0:1:3:26,3,0	./.	./.	./.
chr10	91846276	.	T	TAAC	18959.49	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-10.655;DP=600;FS=11.336;HRun=0;HaplotypeScore=74.3284;InbreedingCoeff=0.9839;MQ=69.23;MQ0=0;MQRankSum=-1.073;QD=41.04;ReadPosRankSum=1.243;VQSLOD=5.7669;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,1993	0/0:9,0:9:26.96:0,27,398	0/0:13,0:13:26.94:0,27,352	0/0:11,0:10:14.71:0,15,179	1/1:1,25:26:64.70:1142,65,0	1/1:1,22:23:48.16:1017,48,0	1/1:4,21:25:39.13:850,39,0	1/1:6,30:37:93.15:1527,93,0	1/1:0,18:18:39.13:849,39,0	1/1:1,28:30:83.78:1377,84,0	1/1:1,5:6:11.82:163,12,0	1/1:2,18:22:27.09:586,27,0	1/1:1,23:24:45.15:979,45,0	1/1:1,14:16:27:588,27,0	0/0:15,0:15:45.11:0,45,629	1/1:1,13:14:15.05:327,15,0	0/0:43,0:43:99:0,123,1794	1/1:2,26:28:66.23:1439,66,0	1/1:1,17:18:51.06:873,51,0	1/1:2,15:18:44.12:694,44,0	1/1:1,19:20:39.13:821,39,0	1/1:1,10:11:30.02:575,30,0	1/1:2,14:16:27:469,27,0	1/1:4,23:27:48.16:1035,48,0	1/1:0,15:16:33.11:719,33,0	1/1:2,28:30:83.98:1622,84,0	1/1:1,22:24:41.83:914,42,0	1/1:0,13:13:18.06:392,18,0
chr10	91847035	.	TC	T	4069.82	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=3.671;DP=590;FS=1.597;HRun=9;HaplotypeScore=68.4041;InbreedingCoeff=0.9187;MQ=66.09;MQ0=0;MQRankSum=-0.730;QD=18.33;ReadPosRankSum=-0.362;VQSLOD=3.8049;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:95.60:0,96,1058	0/0:10,0:10:27.08:0,27,310	0/0:18,0:10:16.57:0,17,152	0/1:28,0:25:31.68:32,0,188	1/1:2,18:20:51.03:466,51,0	0/0:35,0:35:96.28:0,96,1103	0/0:26,0:26:63.19:0,63,727	1/1:13,13:26:38.99:357,39,0	1/1:6,21:27:32.21:443,32,0	0/0:21,0:21:45.13:0,45,514	0/0:10,0:10:21.06:0,21,241	1/1:0,21:21:63.03:577,63,0	0/0:13,0:13:33.06:0,33,366	0/0:22,0:22:48.10:0,48,524	0/0:34,0:34:90.05:0,90,989	0/0:20,1:21:35.71:0,36,657	0/0:20,0:20:42.02:0,42,466	0/0:19,0:19:48.14:0,48,554	1/1:2,14:16:42.02:384,42,0	1/1:6,10:16:23.99:219,24,0	1/1:0,18:18:51.03:467,51,0	0/0:17,0:17:39.11:0,39,449	0/0:17,0:17:48.10:0,48,530	0/0:31,0:31:81.24:0,81,935	0/0:16,0:16:39.08:0,39,434	1/1:3,18:21:48.02:439,48,0	1/1:3,20:23:60.03:549,60,0	1/1:1,5:6:15.01:137,15,0
chr10	91848584	.	TG	T	11826.27	PASS	AB=0.837;AC=54;AF=0.964;AN=56;BaseQRankSum=-7.521;DP=426;FS=11.903;HRun=2;HaplotypeScore=74.7806;InbreedingCoeff=-0.0420;MQ=81.80;MQ0=3;MQRankSum=-3.884;QD=27.76;ReadPosRankSum=3.107;VQSLOD=3.3437;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:36.12:464,36,0	1/1:0,3:3:9.03:117,9,0	0/1:25,8:24:99:269,0,188	0/1:36,6:28:99:114,0,185	1/1:0,11:11:30.08:389,30,0	1/1:0,17:17:48.16:623,48,0	1/1:1,14:15:33.11:428,33,0	1/1:1,25:25:72.19:905,72,0	1/1:1,13:14:36.59:468,37,0	1/1:0,20:20:53.94:701,54,0	1/1:0,8:8:18.06:234,18,0	1/1:0,12:12:33.11:428,33,0	1/1:0,7:7:18.06:233,18,0	1/1:0,12:12:33.11:428,33,0	1/1:0,14:14:39.13:506,39,0	1/1:0,11:11:33.11:428,33,0	1/1:1,7:8:21.07:273,21,0	1/1:0,7:7:21.07:273,21,0	1/1:0,20:20:51.16:655,51,0	1/1:1,10:11:27.09:349,27,0	1/1:4,32:36:69.22:896,69,0	1/1:0,14:14:39.13:506,39,0	1/1:0,7:7:15.05:195,15,0	1/1:0,17:17:41.95:545,42,0	1/1:0,6:6:12.04:156,12,0	1/1:0,15:15:45.15:584,45,0	1/1:0,9:8:24.08:310,24,0	1/1:0,13:13:27.09:350,27,0
chr10	91850950	.	G	GT	4019	PASS	AB=0.906;AC=22;AF=0.393;AN=56;BaseQRankSum=-8.889;DP=614;FS=0.763;HRun=11;HaplotypeScore=67.5011;InbreedingCoeff=0.7983;MQ=79.57;MQ0=2;MQRankSum=1.814;QD=15.34;ReadPosRankSum=-1.964;VQSLOD=3.6456;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:59.66:0,60,449	0/1:12,3:15:46.48:46,0,233	0/1:42,0:27:29.84:30,0,137	0/0:37,0:23:27.93:0,28,191	1/1:7,20:29:39.55:526,40,0	0/0:25,1:25:8.83:0,9,391	0/0:23,0:23:50.73:0,51,389	1/1:12,15:28:9.03:428,9,0	1/1:0,20:20:54.11:548,54,0	0/0:20,1:22:19.38:0,19,323	0/0:20,0:20:47.81:0,48,370	1/1:1,11:13:26.89:258,27,0	0/0:13,1:14:5.40:0,5,225	0/0:14,0:14:9.87:0,10,186	0/0:21,0:21:50.76:0,51,395	0/0:18,0:19:43.86:0,44,331	0/0:29,0:29:68.65:0,69,527	0/0:15,0:16:43.87:0,44,331	1/1:5,21:26:18.82:583,19,0	1/1:3,21:24:36.83:544,37,0	1/1:0,8:11:26.56:226,27,0	0/0:17,1:20:24.43:0,24,351	0/0:27,0:27:55.76:0,56,421	0/0:16,0:16:35.83:0,36,275	0/0:21,0:21:56.75:0,57,436	1/1:6,12:20:39.99:367,40,0	1/1:5,16:21:18.85:373,19,0	1/1:7,3:10:9.02:91,9,0
chr10	91851533	.	CTGTGTGTCTG	C	7541.78	PASS	AB=0.644;AC=26;AF=0.591;AN=44;BaseQRankSum=9.714;DP=978;FS=14.829;HRun=0;HaplotypeScore=293.3897;InbreedingCoeff=0.7283;MQ=54.58;MQ0=16;MQRankSum=-3.881;QD=15.88;ReadPosRankSum=0.284;VQSLOD=1.9783;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,135,5239	0/0:6,0:6:9.03:0,9,312	0/0:47,0:24:18.79:0,19,248	0/0:46,0:23:29.53:0,30,383	./.	1/1:10,19:28:3.01:91,3,0	1/1:14,24:38:3.20:87,3,0	1/1:45,0:43:42.11:671,42,0	1/1:14,31:45:17.92:536,18,0	1/1:11,26:35:66.16:1462,66,0	./.	1/1:14,20:34:12.02:316,12,0	0/1:15,19:34:0:0,0,0	1/1:5,19:25:9.03:212,9,0	0/0:47,0:46:96.29:0,96,3160	1/1:14,28:42:8.97:238,9,0	0/0:34,0:34:55.01:0,55,2298	0/1:14,17:30:1.80:86,0,2	1/1:16,15:27:45.15:1154,45,0	./.	./.	./.	./.	0/0:9,22:30:0:0,0,0	0/0:6,16:22:0:0,0,0	1/1:15,32:47:87.24:1979,87,0	1/1:10,12:22:11.91:360,12,0	1/1:5,10:15:12.04:350,12,0
chr10	91854010	.	CT	C	5375.77	PASS	AB=0.952;AC=26;AF=0.464;AN=56;BaseQRankSum=-1.662;DP=690;FS=1.817;HRun=11;HaplotypeScore=95.5705;InbreedingCoeff=0.8612;MQ=72.30;MQ0=2;MQRankSum=-0.882;QD=16.85;ReadPosRankSum=2.847;VQSLOD=5.4781;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,135,1395	0/1:6,0:6:6.58:7,0,142	0/1:24,3:22:24.97:25,0,180	0/0:19,0:15:11.21:0,11,108	0/0:22,0:23:41.21:0,41,583	1/1:1,25:27:73.95:597,74,0	1/1:5,18:23:47.91:394,48,0	0/0:27,1:28:38.50:0,39,607	0/0:9,0:9:24.06:0,24,256	1/1:2,14:16:41.92:341,42,0	1/1:5,27:32:75.24:605,75,0	0/0:20,0:20:36.08:0,36,377	1/1:3,26:31:75.91:603,76,0	1/1:2,17:19:44.93:369,45,0	0/0:23,0:23:60.10:0,60,620	1/1:3,16:19:41.95:345,42,0	0/0:35,0:35:90.17:0,90,939	1/1:6,18:24:53.93:443,54,0	0/0:18,0:18:29.90:0,30,286	0/0:29,0:29:35.45:0,35,563	0/0:30,1:31:53.57:0,54,766	1/1:3,17:20:23.68:339,24,0	1/1:4,20:25:52.89:421,53,0	1/1:3,31:34:80.89:665,81,0	1/1:4,11:15:26.93:222,27,0	0/0:36,1:37:37.88:0,38,781	0/0:32,1:33:15.16:0,15,513	0/0:11,0:11:24.04:0,24,246
chr10	91854027	.	C	CT	6778.06	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-14.329;DP=672;FS=4.978;HRun=5;HaplotypeScore=94.1404;InbreedingCoeff=0.9813;MQ=70.29;MQ0=2;MQRankSum=-0.879;QD=29.09;ReadPosRankSum=-2.218;VQSLOD=3.9555;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,129,1386	0/0:6,0:6:12.01:0,12,120	0/0:27,1:22:18.65:0,19,283	0/0:19,0:15:18.03:0,18,164	1/1:3,22:25:57.17:735,57,0	0/0:28,0:28:69.17:0,69,741	0/0:19,0:19:52:0,52,542	1/1:4,26:30:81.24:1025,81,0	1/1:3,13:16:36.12:474,36,0	0/0:17,0:17:48.10:0,48,508	0/0:35,0:35:99:0,99,1055	1/1:5,15:20:36.12:474,36,0	0/0:32,0:32:78.17:0,78,822	0/0:20,0:20:54.12:0,54,572	0/0:23,0:23:69.17:0,69,742	0/0:15,0:15:36.07:0,36,378	0/0:33,0:33:87.21:0,87,927	0/0:25,0:25:72.15:0,72,757	1/1:4,16:20:47.71:568,48,0	1/1:3,24:27:72.15:908,72,0	1/1:4,24:28:66.21:868,66,0	0/0:20,0:20:51.11:0,51,540	0/0:24,0:24:60.06:0,60,620	0/0:32,0:32:87.18:0,87,923	0/0:15,0:15:36.04:0,36,362	1/1:10,21:31:7.76:791,8,0	1/1:5,23:28:52.80:658,53,0	1/1:0,8:8:21.07:276,21,0
chr10	91856865	.	TTCC	T	7569.93	PASS	AB=0.969;AC=21;AF=0.375;AN=56;BaseQRankSum=15.883;DP=751;FS=0.338;HRun=0;HaplotypeScore=112.0729;InbreedingCoeff=0.9532;MQ=62.71;MQ0=0;MQRankSum=-2.760;QD=27.33;ReadPosRankSum=2.320;VQSLOD=4.6131;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,121,2334	0/0:13,0:13:27.09:0,27,552	0/1:29,1:28:1.72:2,0,749	0/0:26,0:24:43.16:0,43,651	1/1:6,21:27:54.08:747,54,0	0/0:25,0:25:69.20:0,69,1323	0/0:28,0:28:69.24:0,69,1407	1/1:9,21:30:63.14:824,63,0	1/1:3,29:32:78.20:1130,78,0	0/0:31,0:31:78.27:0,78,1626	0/0:20,0:20:57.15:0,57,1091	1/1:3,26:29:72.24:1065,72,0	0/0:25,0:25:51.17:0,51,1050	0/0:25,0:25:69.21:0,69,1348	0/0:37,0:36:99:0,102,2061	0/0:35,0:34:93.32:0,93,1927	0/0:31,0:31:72.14:0,72,1396	0/0:23,0:23:47.25:0,47,847	1/1:3,11:14:36.10:492,36,0	1/1:6,13:19:36.12:534,36,0	1/1:6,27:33:60.20:890,60,0	0/0:20,0:20:51.15:0,51,987	0/0:12,0:12:30.10:0,30,601	0/0:36,0:36:99:0,99,1907	0/0:33,0:33:90.24:0,90,1705	1/1:1,21:22:60.19:872,60,0	1/1:8,20:28:48.16:702,48,0	1/1:5,7:12:21.07:311,21,0
chr10	91857262	.	A	AC	7930.63	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-14.280;DP=635;FS=9.906;HRun=4;HaplotypeScore=64.8163;InbreedingCoeff=0.9732;MQ=83.13;MQ0=0;MQRankSum=-2.427;QD=34.18;ReadPosRankSum=1.619;VQSLOD=5.1348;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,114,1291	0/0:8,0:8:24.07:0,24,272	0/0:20,0:20:54.14:0,54,595	0/0:16,0:16:44.79:0,45,470	1/1:1,13:14:36.12:492,36,0	0/0:15,0:15:42.12:0,42,476	0/0:28,0:28:75.21:0,75,851	1/1:5,22:27:57.17:762,57,0	1/1:2,23:25:72.24:977,72,0	0/0:31,0:31:81.18:0,81,899	0/0:10,0:10:27.08:0,27,306	1/1:3,31:34:78.26:1057,78,0	0/0:26,0:26:75.21:0,75,850	0/0:21,0:21:63.16:0,63,703	0/0:24,0:24:66.17:0,66,738	0/0:17,0:17:48.14:0,48,544	0/0:34,0:34:93.26:0,93,1055	0/0:27,0:27:75.21:0,75,850	1/1:3,19:22:60.20:820,60,0	1/1:2,15:17:30.10:410,30,0	1/1:1,50:51:99:1928,141,0	0/0:20,0:20:51.14:0,51,578	0/0:12,0:12:33.09:0,33,374	0/0:18,0:18:48.13:0,48,544	0/0:26,0:26:69.20:0,69,781	1/1:2,26:28:47.23:1032,47,0	1/1:0,12:12:30.10:410,30,0	1/1:0,2:2:3.01:41,3,0
chr10	91857843	.	G	GAAAAA	8415.19	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=6.926;DP=487;FS=0.000;HRun=14;HaplotypeScore=136.4027;InbreedingCoeff=0.8743;MQ=48.08;MQ0=5;MQRankSum=-9.125;QD=23.18;ReadPosRankSum=-6.892;VQSLOD=0.6467;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:40:60.21:0,60,803	0/0:8,0:8:14.67:0,15,210	0/0:21,0:8:14.08:0,14,166	0/0:13,0:6:9:0,9,113	1/1:21,0:21:24.08:515,24,0	1/1:10,0:10:11.29:145,11,0	1/1:25,0:25:32.28:506,32,0	1/1:25,1:31:51.14:1036,51,0	1/1:17,0:16:15.03:284,15,0	1/1:20,0:19:28.17:417,28,0	1/1:14,0:12:12.04:259,12,0	1/1:10,0:7:12.04:267,12,0	1/1:13,0:13:12.04:287,12,0	1/1:11,0:11:12.04:239,12,0	0/0:18,0:19:13.12:0,13,484	1/1:11,0:9:9.03:217,9,0	0/0:20,0:23:56.39:0,56,735	1/1:20,0:18:26.31:452,26,0	1/1:19,0:23:42.06:771,42,0	1/1:20,0:18:21.05:438,21,0	1/1:8,0:8:15.41:266,15,0	1/1:16,0:16:23.69:411,24,0	1/1:15,0:15:19.79:306,20,0	0/1:10,0:8:0.15:0,0,0	1/1:14,0:14:29.30:460,29,0	1/1:17,0:17:24.08:551,24,0	1/1:21,0:20:27.06:494,27,0	1/1:14,0:13:6:95,6,0
chr10	91862164	.	A	AAT	10711.20	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-3.368;DP=632;FS=9.747;HRun=0;HaplotypeScore=111.2560;InbreedingCoeff=0.8710;MQ=74.26;MQ0=7;MQRankSum=0.076;QD=24.02;ReadPosRankSum=-2.977;VQSLOD=4.1036;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:69.21:0,69,978	0/0:10,0:10:27.07:0,27,375	0/0:36,0:23:57.50:0,57,702	0/0:39,0:19:48.81:0,49,539	1/1:4,13:17:23.74:398,24,0	1/1:6,14:20:12.51:197,13,0	1/1:5,40:46:17.90:296,18,0	1/1:2,35:37:99:1648,108,0	1/1:5,15:20:18.51:313,19,0	1/1:21,0:21:53.36:803,53,0	1/1:9,0:9:21.03:327,21,0	1/1:1,20:21:21.04:341,21,0	1/1:4,16:21:5.96:83,6,0	1/1:11,1:12:30.95:466,31,0	0/0:18,0:18:48.13:0,48,665	1/1:3,17:20:9:142,9,0	0/0:22,0:22:48.14:0,48,680	1/1:4,14:20:8.96:109,9,0	1/1:6,29:36:96.22:1548,96,0	1/1:2,20:22:57.17:985,57,0	0/0:2,24:27:0:0,0,0	1/1:1,18:19:39.60:592,40,0	1/1:3,11:15:9.03:152,9,0	1/1:3,22:25:9.03:170,9,0	1/1:10,0:10:27.08:471,27,0	1/1:1,28:29:79.65:1395,80,0	1/1:2,14:17:11.60:173,12,0	1/1:7,1:8:6.02:100,6,0
chr10	91862165	.	A	ATATC	5607.92	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=5.877;DP=693;FS=11.401;HRun=0;HaplotypeScore=171.1597;InbreedingCoeff=0.8342;MQ=70.60;MQ0=7;MQRankSum=-0.287;QD=10.54;ReadPosRankSum=-2.666;VQSLOD=2.8856;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:74.83:0,75,1320	0/0:10,0:10:29.98:0,30,507	0/0:36,0:23:58.39:0,58,869	0/0:38,0:18:48.82:0,49,684	1/1:19,0:19:23.64:231,24,0	1/1:21,0:21:12.44:120,12,0	1/1:46,0:46:17.84:146,18,0	1/1:40,0:40:99:764,102,0	1/1:25,0:25:24.64:240,25,0	1/1:27,0:27:65.52:479,66,0	1/1:11,0:11:20.75:151,21,0	1/1:26,0:26:23.79:212,24,0	1/1:24,0:24:6.52:68,7,0	1/1:13,0:12:32.72:257,33,0	0/0:19,0:19:48.14:0,48,862	1/1:26,0:26:8.79:76,9,0	0/0:23,0:23:48.62:0,49,881	0/1:23,0:23:1.16:143,0,1	1/1:36,0:36:94.70:688,95,0	1/1:23,0:23:59.43:507,59,0	0/1:26,0:26:0.07:0,0,0	1/1:25,0:25:39.33:355,39,0	1/1:17,0:17:8.85:75,9,0	1/1:31,0:29:8.95:89,9,0	1/1:16,0:15:26.60:185,27,0	1/1:30,0:29:77.79:603,78,0	1/1:19,0:19:13.40:117,13,0	1/1:1,7:8:5.94:101,6,0
chr10	91862177	.	TTCTCTC	T	237.94	PASS	AB=0.783;AC=5;AF=0.096;AN=52;BaseQRankSum=1.680;DP=733;FS=20.865;HRun=0;HaplotypeScore=183.6895;InbreedingCoeff=0.1950;MQ=59.72;MQ0=9;MQRankSum=-2.119;QD=2.24;ReadPosRankSum=1.788;VQSLOD=1.5201;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,19:45:13.51:70,0,14	0/1:12,1:13:6.54:54,0,7	./.	./.	0/0:18,0:18:5.25:0,5,137	0/0:20,0:20:6.02:0,6,162	0/0:45,0:47:28.94:0,29,693	0/0:38,0:38:12.51:0,13,62	0/0:32,0:32:24.19:0,24,573	0/0:29,0:29:33.10:0,33,766	0/0:8,0:8:0:0,0,0	0/0:26,0:25:10.92:0,11,236	0/0:21,0:21:8.05:0,8,164	0/0:13,0:12:6.02:0,6,116	0/1:13,8:21:13.04:108,0,13	0/0:29,0:30:23.15:0,23,261	1/1:15,11:26:6.02:115,6,0	0/0:27,0:27:21.07:0,21,498	0/0:37,0:37:16.53:0,17,346	0/0:28,0:28:6.01:0,6,107	0/0:27,0:27:6.02:0,6,129	0/0:27,0:27:3.01:0,3,34	0/0:22,0:21:6:0,6,66	0/0:39,0:37:19.22:0,19,366	0/0:17,0:16:3.01:0,3,79	0/0:30,0:29:12.28:0,12,292	0/0:19,0:19:15.05:0,15,386	0/0:11,0:11:7.72:0,8,98
chr10	91863190	.	G	GA	3807.43	PASS	AB=0.685;AC=37;AF=0.661;AN=56;BaseQRankSum=-5.384;DP=511;FS=4.033;HRun=14;HaplotypeScore=65.4410;InbreedingCoeff=0.2051;MQ=61.86;MQ0=8;MQRankSum=-2.511;QD=9.00;ReadPosRankSum=-1.064;VQSLOD=2.6855;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,7:39:16.73:17,0,275	0/0:11,0:12:4.74:0,5,25	0/0:15,0:7:15.66:0,16,90	0/0:12,0:7:13.85:0,14,82	1/1:5,8:15:10.92:190,11,0	0/1:14,16:31:6.97:306,0,7	1/1:7,14:22:9.05:297,9,0	1/1:10,17:27:16.01:373,16,0	1/1:2,10:12:18:158,18,0	1/1:10,10:20:4.63:155,5,0	1/1:8,10:19:20.16:205,20,0	0/1:6,9:15:13.26:20,0,13	0/1:11,4:16:18.54:106,0,19	1/1:8,1:9:14.36:99,14,0	0/0:15,0:15:23.46:0,23,153	0/1:4,4:8:20.54:88,0,21	0/0:30,0:33:13.47:0,13,247	0/1:7,14:21:2.69:211,0,3	1/1:13,2:13:1.75:127,2,0	1/1:13,8:21:1.67:132,2,0	1/1:3,6:10:8.84:67,9,0	0/1:11,8:19:27.85:147,0,28	1/1:6,9:15:21:185,21,0	1/1:1,11:14:32.83:278,33,0	0/1:6,6:12:6.38:65,0,6	1/1:17,7:24:6.88:274,7,0	1/1:7,9:17:20.63:151,21,0	0/1:7,11:20:8.86:157,0,9
chr10	91866180	.	GGAGGAA	G	598.86	PASS	AB=1.000;AC=32;AF=0.696;AN=46;BaseQRankSum=3.525;DP=273;FS=10.744;HRun=0;HaplotypeScore=36.1135;InbreedingCoeff=0.3886;MQ=23.89;MQ0=103;MQRankSum=-3.674;QD=3.33;ReadPosRankSum=-0.873;VQSLOD=-0.1791;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:18:24.97:0,25,706	1/1:4,0:2:2:20,2,0	./.	0/0:4,0:1:3.01:0,3,62	0/1:12,0:7:0:0,0,0	1/1:13,0:6:1.25:3,1,0	1/1:14,0:3:1.55:4,2,0	1/1:22,0:9:16:88,16,0	1/1:9,0:4:2.69:17,3,0	1/1:12,0:7:15:195,15,0	1/1:1,4:4:3.01:46,3,0	./.	1/1:1,3:3:8.89:88,9,0	./.	0/0:15,0:6:12.04:0,12,301	1/1:7,0:2:2.90:16,3,0	0/0:14,0:7:8.99:0,9,158	0/1:5,0:2:0:0,0,0	1/1:13,0:6:6.45:31,6,0	0/0:7,0:6:2.07:0,2,6	0/1:8,0:3:11.98:12,0,37	1/1:6,2:5:6.02:82,6,0	./.	1/1:11,1:4:5.61:43,6,0	1/1:7,4:6:3.01:38,3,0	0/1:15,0:7:1.95:37,0,2	1/1:6,0:3:2.22:9,2,0	./.
chr10	91866183	.	GGAA	G	851.23	PASS	AB=0.963;AC=31;AF=0.674;AN=46;BaseQRankSum=2.935;DP=273;FS=11.044;HRun=0;HaplotypeScore=31.3215;InbreedingCoeff=0.3881;MQ=24.42;MQ0=100;MQRankSum=-4.412;QD=5.10;ReadPosRankSum=-0.878;VQSLOD=-0.0267;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:20:47.67:0,48,785	0/1:5,0:3:1.54:2,0,15	./.	0/0:4,0:1:3.01:0,3,52	1/1:4,9:8:3.01:38,3,0	0/0:9,4:6:1.17:0,1,3	1/1:15,0:4:0.47:1,0,0	1/1:11,9:9:26.93:325,27,0	1/1:5,4:4:6.02:78,6,0	0/1:12,0:7:0.34:52,0,0	1/1:5,0:4:2.74:12,3,0	./.	1/1:4,0:3:5.29:32,5,0	./.	0/0:14,0:6:12.04:0,12,276	0/0:7,0:2:0.89:0,1,2	0/0:13,0:7:8.99:0,9,158	1/1:5,0:2:0.47:1,0,0	1/1:12,2:6:12.42:117,12,0	1/1:6,1:6:6.02:65,6,0	0/1:7,1:3:11.98:12,0,60	1/1:8,0:5:2.13:11,2,0	./.	1/1:11,0:4:2.11:16,2,0	1/1:10,0:5:2.94:18,3,0	1/1:8,7:7:14.95:178,15,0	1/1:3,3:3:2.87:28,3,0	./.
chr10	91866769	.	A	ATTTCT	34763.25	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=5.432;DP=686;FS=6.491;HRun=0;HaplotypeScore=144.8629;InbreedingCoeff=0.9965;MQ=78.54;MQ0=0;MQRankSum=-16.676;QD=67.76;ReadPosRankSum=-2.333;VQSLOD=5.4916;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,154,3112	0/0:10,0:10:27.08:0,27,522	0/0:29,0:29:66.26:0,66,1332	0/0:19,0:19:48.16:0,48,903	1/1:9,17:27:57.06:1167,57,0	1/1:2,17:19:54.18:1603,54,0	1/1:12,20:32:78.27:2037,78,0	1/1:10,14:26:69.20:1929,69,0	1/1:6,22:28:69.24:1920,69,0	1/1:4,21:31:93.28:2472,93,0	1/1:7,7:14:36.12:773,36,0	1/1:7,21:28:78.27:2342,78,0	1/1:6,20:27:72.16:2050,72,0	1/1:5,11:17:42.14:1250,42,0	0/0:27,0:27:78.25:0,78,1566	1/1:7,25:32:81.28:2400,81,0	0/0:32,0:32:90.31:0,90,1845	1/1:4,12:17:33.11:906,33,0	1/1:5,15:21:57.20:1698,57,0	1/1:3,20:26:75.21:1837,75,0	1/1:5,18:25:51.17:1392,51,0	1/1:4,13:18:48.16:1201,48,0	1/1:2,18:21:48.63:1161,49,0	1/1:9,11:21:39.09:983,39,0	1/1:7,21:29:69.23:1754,69,0	1/1:6,14:23:57.13:1476,57,0	1/1:4,20:24:69.24:1953,69,0	1/1:1,5:7:15.05:459,15,0
chr10	91869724	.	GCACA	G	13288.86	PASS	AB=0.632;AC=41;AF=0.732;AN=56;BaseQRankSum=4.783;DP=882;FS=1.921;HRun=0;HaplotypeScore=165.9375;InbreedingCoeff=0.7207;MQ=54.75;MQ0=13;MQRankSum=1.654;QD=20.89;ReadPosRankSum=3.447;VQSLOD=4.6551;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,1:44:31.12:0,31,1428	0/0:7,0:10:29.31:0,29,544	0/0:54,0:18:11.99:0,12,182	0/0:64,0:21:9.01:0,9,119	1/1:7,13:21:30.10:467,30,0	1/1:13,19:33:5.13:457,5,0	0/1:10,12:23:0.73:318,0,1	1/1:21,12:34:19.87:466,20,0	1/1:8,20:29:36:585,36,0	1/1:8,24:35:44.24:1018,44,0	1/1:4,13:17:13.65:332,14,0	1/1:16,15:34:5.87:487,6,0	1/1:7,14:22:32.94:481,33,0	1/1:13,20:34:46.55:700,47,0	0/0:34,0:34:77.51:0,78,1737	1/1:10,31:42:77.86:1200,78,0	0/0:35,0:38:54.12:0,54,754	0/1:10,8:18:8.09:223,0,8	1/1:7,7:14:22.35:354,22,0	1/1:4,16:21:42.14:683,42,0	1/1:28,40:68:62.96:1321,63,0	1/1:2,13:17:20.49:476,20,0	0/1:3,10:13:11.32:270,0,11	1/1:14,28:42:32.17:808,32,0	1/1:7,14:25:24.02:369,24,0	1/1:15,19:34:35.31:733,35,0	1/1:9,23:37:50.08:883,50,0	1/1:4,14:23:35.54:657,36,0
chr10	91873463	.	C	CGCAGTCATCGCA	32960.29	PASS	AB=0.960;AC=25;AF=0.446;AN=56;BaseQRankSum=4.839;DP=712;FS=4.349;HRun=0;HaplotypeScore=254.2151;InbreedingCoeff=0.9200;MQ=65.77;MQ0=0;MQRankSum=-19.284;QD=94.17;ReadPosRankSum=2.706;VQSLOD=4.3148;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,4018	0/0:9,0:9:27.07:0,27,840	0/0:9,0:9:27.09:0,27,820	0/0:13,0:14:30.05:0,30,926	0/0:17,0:17:48.16:0,48,1803	1/1:5,9:15:27.09:1667,27,0	1/1:27,16:47:87.09:4688,87,0	0/0:25,0:25:72.24:0,72,2478	0/0:30,0:30:90.31:0,90,3348	1/1:14,11:25:72.20:3943,72,0	1/1:10,4:16:12.04:736,12,0	0/0:30,0:30:81.25:0,81,2864	1/1:15,21:41:90.31:5366,90,0	1/1:17,20:43:84.25:4857,84,0	0/0:24,0:24:69.24:0,69,2575	1/1:17,12:31:53.52:3291,54,0	0/0:27,0:27:81.24:0,81,2884	1/1:12,7:22:42.14:2474,42,0	0/0:27,0:27:69.24:0,69,2342	0/0:12,0:12:27.08:0,27,894	0/0:67,0:67:99:0,190,6978	1/1:10,10:22:27.09:1664,27,0	1/1:12,3:16:15.05:884,15,0	1/1:9,14:26:27.06:1666,27,0	1/1:9,7:22:24.08:1481,24,0	0/1:23,1:24:99:244,0,2152	0/0:18,0:18:54.19:0,54,2000	0/0:16,0:16:48.16:0,48,1767
chr10	91874606	.	CT	C	697.52	PASS	AB=0.836;AC=9;AF=0.188;AN=48;BaseQRankSum=0.968;DP=523;FS=9.110;HRun=14;HaplotypeScore=71.4096;InbreedingCoeff=0.1311;MQ=61.85;MQ0=14;MQRankSum=2.664;QD=3.88;ReadPosRankSum=2.863;VQSLOD=0.4359;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:35,4:37:19.41:19,0,434	0/0:7,0:8:11.12:0,11,123	0/0:15,0:10:7.58:0,8,39	0/0:14,1:9:4.46:0,4,46	0/0:27,0:27:36.86:0,37,320	0/1:3,8:12:23.88:138,0,24	1/1:9,20:29:32.81:353,33,0	0/0:29,1:30:30.36:0,30,393	0/1:17,2:19:31.78:32,0,231	0/0:19,0:19:0:0,0,0	./.	0/0:14,1:15:13.24:0,13,236	0/0:11,0:11:0.47:0,0,1	0/0:9,0:9:0:0,0,1	0/0:22,0:22:21.30:0,21,427	0/1:9,16:24:8.09:240,0,8	0/0:38,4:41:34.45:0,34,690	./.	0/0:20,2:22:0.68:0,1,272	0/0:18,0:21:50.60:0,51,417	0/1:12,1:13:16.86:17,0,143	./.	./.	0/1:14,0:14:0.04:0,0,0	0/0:12,0:12:0.94:0,1,2	0/0:24,0:25:30.88:0,31,397	0/1:24,2:25:22.14:22,0,231	0/0:6,0:6:8.96:0,9,75
chr10	91875705	.	AAGAGAGAGAGAG	A	1482.10	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=2.381;DP=589;FS=16.865;HRun=0;HaplotypeScore=172.5032;InbreedingCoeff=0.7197;MQ=59.17;MQ0=10;MQRankSum=-2.079;QD=8.67;ReadPosRankSum=0.911;VQSLOD=1.9313;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:21.03:0,21,781	0/0:12,0:12:9.02:0,9,281	0/0:41,0:14:0.47:0,0,1	0/0:52,0:10:0.47:0,0,1	0/0:25,0:24:12.02:0,12,313	0/0:21,0:21:29.92:0,30,893	0/0:22,0:21:21.54:0,22,731	0/0:23,0:22:26.99:0,27,426	0/0:16,0:16:15.39:0,15,727	1/1:11,10:19:14.48:142,14,0	1/1:10,3:12:5.91:119,6,0	0/0:20,0:20:21.04:0,21,892	1/1:20,2:22:20.96:421,21,0	1/1:22,2:24:11.98:190,12,0	0/0:21,0:21:17.88:0,18,653	0/0:18,0:18:6.02:0,6,244	0/0:16,0:16:24.97:0,25,1057	1/1:13,9:22:3.01:103,3,0	0/0:18,0:17:15.51:0,16,597	0/0:12,0:12:2.98:0,3,25	0/0:10,0:10:5.36:0,5,184	1/1:13,0:13:3:27,3,0	0/1:13,0:13:5.12:5,0,8	1/1:14,12:27:8.87:222,9,0	1/1:7,9:16:15.01:432,15,0	0/0:31,0:30:54.15:0,54,2326	0/0:26,0:25:39.13:0,39,1706	0/0:11,0:11:24.08:0,24,970
chr10	91876396	.	GT	G	661.16	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.948;DP=606;FS=3.151;HRun=1;HaplotypeScore=85.8578;InbreedingCoeff=0.9953;MQ=72.44;MQ0=0;MQRankSum=-8.447;QD=18.89;ReadPosRankSum=2.662;VQSLOD=4.1675;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:99:0,135,2106	0/0:7,0:7:21.07:0,21,335	0/0:11,0:11:30.08:0,30,439	0/0:10,0:10:21.07:0,21,308	0/0:31,0:31:93.30:0,93,1451	1/1:2,13:15:44.87:375,45,0	1/1:2,7:9:23.89:180,24,0	0/0:31,0:31:90.27:0,90,1372	0/0:23,0:23:69.21:0,69,1056	0/0:28,0:28:84.29:0,84,1343	0/0:18,0:18:54.18:0,54,863	0/0:19,0:19:54.15:0,54,826	0/0:21,0:21:63.21:0,63,1006	0/0:18,0:18:54.18:0,54,855	0/0:26,0:26:78.18:0,78,1163	1/1:0,11:11:32.87:249,33,0	0/0:36,0:36:99:0,105,1655	0/0:25,0:25:75.23:0,75,1172	0/0:25,0:25:75.25:0,75,1170	0/0:20,0:20:60.19:0,60,929	0/0:49,0:49:99:0,141,2175	0/0:17,0:17:51.16:0,51,786	0/0:17,0:17:51.17:0,51,806	0/0:23,0:23:63.21:0,63,1007	0/0:17,0:17:48.16:0,48,762	0/0:30,0:30:90.31:0,90,1439	0/0:14,0:14:42.10:0,42,635	0/0:8,0:8:24.06:0,24,360
chr10	91876398	.	ATAAGTTGTGGATGAACCAGC	A	4744.11	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.509;DP=600;FS=0.676;HRun=0;HaplotypeScore=311.5624;InbreedingCoeff=0.9959;MQ=73.70;MQ0=0;MQRankSum=-8.939;QD=139.53;ReadPosRankSum=3.225;VQSLOD=3.7912;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:99:0,126,10992	0/0:7,0:7:21.07:0,21,1787	0/0:13,0:13:39.12:0,39,2231	0/0:9,0:9:27.09:0,27,1935	0/0:29,0:29:87.28:0,87,7105	1/1:2,13:15:42.12:2004,42,0	1/1:1,7:8:21.07:1063,21,0	0/0:32,0:32:87.28:0,87,6459	0/0:23,0:23:66.23:0,66,5393	0/0:28,0:28:78.27:0,78,6509	0/0:18,0:18:54.19:0,54,4005	0/0:19,0:19:51.17:0,51,4005	0/0:21,0:21:63.22:0,63,5033	0/0:17,0:17:51.16:0,51,3669	0/0:25,0:25:75.26:0,75,6499	1/1:0,11:11:33.11:1677,33,0	0/0:36,0:36:99:0,108,8767	0/0:25,0:25:75.22:0,75,5938	0/0:24,0:24:69.24:0,69,5640	0/0:21,0:21:63.20:0,63,5271	0/0:48,0:48:99:0,141,11407	0/0:16,0:16:48.15:0,48,3521	0/0:16,0:16:45.14:0,45,3180	0/0:24,0:24:66.23:0,66,5856	0/0:16,0:16:48.15:0,48,3373	0/0:31,0:31:90.30:0,90,7370	0/0:13,0:13:39.13:0,39,3476	0/0:8,0:8:24.08:0,24,2310
chr10	91877577	.	GGTCA	G	2589.67	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.503;DP=793;FS=0.000;HRun=0;HaplotypeScore=141.0101;InbreedingCoeff=0.9943;MQ=62.58;MQ0=2;MQRankSum=-0.616;QD=29.43;ReadPosRankSum=1.381;VQSLOD=3.6305;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,123,2832	0/0:14,0:14:42.14:0,42,1024	0/0:28,0:27:59.67:0,60,1208	0/0:29,0:27:54.41:0,54,1081	0/0:31,0:31:78.27:0,78,1887	1/1:1,25:26:60.20:1003,60,0	1/1:8,22:30:51.17:865,51,0	0/0:28,0:28:60.18:0,60,1251	0/0:25,0:25:69.21:0,69,1568	0/0:34,0:34:84.27:0,84,1921	0/0:26,0:26:63.22:0,63,1487	0/0:15,0:15:42.14:0,42,1030	0/0:20,0:20:54.12:0,54,1240	0/0:23,0:23:57.20:0,57,1388	0/0:35,0:34:90.29:0,90,2138	1/1:9,23:32:51.17:864,51,0	0/0:40,0:40:99:0,99,2369	0/0:32,0:32:81.22:0,81,1868	0/0:23,0:23:45.10:0,45,925	0/0:36,0:36:90.31:0,90,2100	0/0:58,0:58:99:0,147,3586	0/0:23,0:23:66.23:0,66,1578	0/0:17,0:17:45.14:0,45,1072	0/0:27,0:27:69.22:0,69,1578	0/0:28,0:28:72.23:0,72,1656	0/0:33,0:33:87.27:0,87,1980	0/0:26,0:25:63.22:0,63,1515	0/0:7,0:7:15.05:0,15,375
chr10	91879313	.	G	GAAAA	5816.32	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=-1.214;DP=496;FS=3.192;HRun=12;HaplotypeScore=96.7129;InbreedingCoeff=0.9034;MQ=74.47;MQ0=1;MQRankSum=-3.336;QD=27.44;ReadPosRankSum=-1.970;VQSLOD=3.5600;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:41:99:0,101,1286	0/0:7,0:7:14.96:0,15,180	0/1:21,0:20:88.89:89,0,177	0/0:13,0:12:9.56:0,10,87	0/0:18,0:20:53.92:0,54,651	1/1:1,10:17:35.95:651,36,0	1/1:9,12:24:48.12:936,48,0	0/0:20,0:20:35.47:0,35,445	0/0:15,0:17:35.87:0,36,457	1/1:14,6:23:35.29:582,35,0	1/1:3,5:9:18.06:376,18,0	0/0:17,0:17:32.72:0,33,409	1/1:10,5:15:12.04:229,12,0	1/1:5,3:12:11.70:212,12,0	0/0:16,0:16:44.70:0,45,544	1/1:5,7:13:17.98:357,18,0	0/0:29,0:33:62.89:0,63,923	1/1:2,4:16:30.01:514,30,0	0/0:17,0:18:32.59:0,33,356	0/0:11,0:12:26.95:0,27,333	0/0:18,0:22:56.61:0,57,699	1/1:7,6:14:28.91:587,29,0	1/1:8,4:13:14.29:230,14,0	1/1:8,11:19:30.06:631,30,0	1/1:5,7:13:20.99:423,21,0	0/0:18,0:18:38.92:0,39,498	0/0:15,0:15:32.87:0,33,419	0/0:11,0:13:32.51:0,33,390
chr10	91879898	.	GCTCTCTCT	G	610.98	PASS	AB=0.800;AC=13;AF=0.283;AN=46;BaseQRankSum=-1.155;DP=551;FS=12.303;HRun=0;HaplotypeScore=134.6527;InbreedingCoeff=0.5943;MQ=66.57;MQ0=45;MQRankSum=1.692;QD=4.66;ReadPosRankSum=2.479;VQSLOD=1.6815;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:3.94:0,4,101	./.	./.	./.	0/1:12,0:15:0:0,0,0	0/0:18,0:16:9.03:0,9,194	0/0:28,0:26:16.28:0,16,173	0/0:30,0:29:1.82:0,2,5	0/0:9,4:11:0.47:0,0,1	0/0:22,0:22:9.03:0,9,183	0/0:10,0:9:0:0,0,0	1/1:13,0:13:8.02:175,8,0	0/0:17,0:14:15:0,15,263	0/0:21,0:21:9.02:0,9,141	./.	0/0:27,0:26:3.01:0,3,74	0/0:24,0:21:13.83:0,14,281	0/0:24,0:19:27.07:0,27,745	1/1:26,0:24:3.01:74,3,0	./.	1/1:31,0:27:6.01:137,6,0	0/0:13,0:12:15.05:0,15,398	0/0:8,0:7:6.02:0,6,175	0/0:35,0:30:39.80:0,40,904	0/0:13,0:11:6.02:0,6,120	1/1:13,0:13:6.49:179,6,0	1/1:9,5:13:6.02:134,6,0	1/1:17,0:10:3.01:47,3,0
chr10	91879900	.	T	TCGCG	1127.95	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.291;DP=568;FS=1.512;HRun=0;HaplotypeScore=113.0061;InbreedingCoeff=0.8992;MQ=65.38;MQ0=52;MQRankSum=-0.813;QD=15.24;ReadPosRankSum=0.372;VQSLOD=3.2754;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:28:48.16:0,48,742	0/0:6,0:6:14.65:0,15,208	0/0:16,0:10:30.02:0,30,501	0/0:31,0:19:35.45:0,35,654	0/0:16,0:15:27.09:0,27,442	1/1:18,0:16:39.13:612,39,0	1/1:29,0:27:46.50:585,46,0	0/0:32,0:29:80.28:0,80,1348	0/0:13,0:11:14.66:0,15,222	0/0:25,0:24:59.82:0,60,921	0/0:10,0:9:14.94:0,15,219	0/0:13,0:13:33.05:0,33,554	0/0:17,0:14:41.88:0,42,603	0/0:23,0:22:38.98:0,39,558	0/0:26,0:25:42.14:0,42,686	1/1:3,22:26:2.85:63,3,0	0/0:25,0:22:41.37:0,41,616	0/0:25,0:19:51.52:0,52,667	0/0:26,0:24:61.14:0,61,924	0/0:7,0:7:18.06:0,18,265	0/0:29,0:25:42.61:0,43,695	0/0:14,0:13:27.09:0,27,447	0/0:10,0:9:12.04:0,12,215	0/0:38,0:33:63.17:0,63,1037	0/0:14,0:12:26.83:0,27,453	0/0:13,0:13:33.11:0,33,582	0/0:16,0:13:27.09:0,27,422	0/0:18,0:10:24.07:0,24,364
chr10	91879951	.	CTGTGTGTG	C	1356.79	PASS	AB=0.953;AC=22;AF=0.423;AN=52;BaseQRankSum=-0.453;DP=579;FS=20.578;HRun=0;HaplotypeScore=135.7046;InbreedingCoeff=0.4380;MQ=36.50;MQ0=87;MQRankSum=3.703;QD=4.78;ReadPosRankSum=0.715;VQSLOD=1.3829;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:32:15.04:206,15,0	1/1:8,0:6:3.01:74,3,0	./.	./.	0/0:24,0:19:2.03:0,2,4	0/0:16,0:13:12.04:0,12,173	0/0:32,0:26:10.39:0,10,111	0/0:20,0:17:2.99:0,3,23	0/0:21,0:20:8.71:0,9,86	0/1:20,0:21:3.69:250,0,4	1/1:13,0:11:2.67:24,3,0	0/0:27,0:25:13.42:0,13,244	0/1:19,0:16:47.65:95,0,48	0/0:19,9:25:0:0,0,0	1/1:19,0:16:4.78:71,5,0	1/1:18,0:18:8.55:144,9,0	0/1:28,0:21:0.96:210,0,1	1/1:23,0:13:6.21:150,6,0	0/0:15,0:13:11.97:0,12,161	0/0:9,0:7:5.69:0,6,106	0/0:38,0:26:8.87:0,9,138	0/0:19,4:21:0.22:0,0,0	1/1:19,0:17:3.01:40,3,0	1/1:40,0:32:3.01:74,3,0	1/1:9,0:6:8.97:174,9,0	0/1:22,0:20:3.24:3,0,266	0/0:25,0:21:6.96:0,7,85	0/0:17,0:9:9.03:0,9,218
chr10	91880430	.	C	CTTA	1300.10	PASS	AC=32;AF=0.889;AN=36;BaseQRankSum=-0.987;DP=42;FS=8.135;HRun=0;HaplotypeScore=48.9947;InbreedingCoeff=0.2209;MQ=48.33;MQ0=0;MQRankSum=-1.560;QD=33.34;ReadPosRankSum=1.751;VQSLOD=2.8756;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:4:12.04:152,12,0	./.	0/0:1,0:1:3.01:0,3,43	./.	1/1:0,1:1:3.01:32,3,0	1/1:0,1:1:3.01:42,3,0	1/1:0,5:5:15.04:181,15,0	./.	./.	1/1:0,1:1:3.01:40,3,0	./.	./.	1/1:0,0:1:2.68:11,3,0	1/1:0,1:1:3.01:39,3,0	0/0:1,0:1:2.04:0,2,6	1/1:0,1:1:3.01:39,3,0	1/1:0,1:1:3:26,3,0	1/1:0,6:6:18.06:311,18,0	1/1:0,1:1:3.01:49,3,0	./.	1/1:0,7:7:12.49:135,12,0	./.	1/1:0,0:1:3.01:33,3,0	1/1:0,3:4:12.04:163,12,0	1/1:0,2:2:6.02:75,6,0	1/1:0,2:2:5.99:63,6,0	./.	./.
chr10	91880951	.	T	TG	1220.05	PASS	AB=0.967;AC=23;AF=0.500;AN=46;BaseQRankSum=2.542;DP=248;FS=19.146;HRun=12;HaplotypeScore=87.8712;InbreedingCoeff=0.4977;MQ=69.49;MQ0=0;MQRankSum=-2.194;QD=7.18;ReadPosRankSum=-2.019;VQSLOD=0.3012;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:12,3:15:6.90:94,0,7	./.	0/1:10,0:9:15.03:15,0,18	0/0:3,0:3:1.80:0,2,5	0/0:1,0:3:2.51:0,3,6	1/1:4,0:4:2.99:24,3,0	1/1:31,4:37:44.78:330,45,0	0/0:6,0:6:2.95:0,3,22	0/0:6,0:6:2.94:0,3,22	./.	./.	0/1:7,0:7:0:0,0,0	./.	1/1:14,0:15:11.84:80,12,0	1/1:4,0:4:8.93:64,9,0	1/1:7,1:8:8.92:68,9,0	1/1:28,0:28:50.03:325,50,0	1/1:18,1:19:26.88:211,27,0	0/0:5,0:5:8.87:0,9,59	0/0:1,0:1:2.98:0,3,22	0/0:19,0:22:26.25:0,26,154	0/1:2,0:2:0:0,0,0	1/1:2,0:2:2.94:18,3,0	1/1:17,0:17:17.91:138,18,0	./.	0/0:4,0:5:7.99:0,8,50	0/0:11,0:12:10.91:0,11,67	0/1:2,0:2:0:0,0,0
chr10	91880955	.	G	GT	769.37	PASS	AB=1.000;AC=6;AF=0.120;AN=50;BaseQRankSum=2.025;DP=221;FS=0.843;HRun=0;HaplotypeScore=53.4175;InbreedingCoeff=0.5164;MQ=70.46;MQ0=0;MQRankSum=-2.154;QD=18.77;ReadPosRankSum=6.142;VQSLOD=5.7224;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:20.59:0,21,245	./.	0/0:9,0:8:10.79:0,11,75	0/0:4,0:4:8.99:0,9,82	0/0:3,0:3:5.91:0,6,40	0/0:2,0:2:4.25:0,4,29	0/0:29,0:29:36.01:0,36,225	0/0:6,0:6:14.97:0,15,139	0/0:4,0:4:5.97:0,6,68	0/0:2,0:2:5.84:0,6,42	./.	0/0:8,0:8:17.90:0,18,137	./.	0/0:12,0:12:7.87:0,8,82	1/1:0,4:4:9.03:118,9,0	0/1:7,0:7:0.77:1,0,31	1/1:6,19:25:66.91:761,67,0	0/0:17,0:17:31.73:0,32,226	0/0:6,0:6:14.77:0,15,139	0/0:1,0:1:3.01:0,3,42	0/0:25,0:25:54.45:0,54,539	0/0:2,0:2:5.97:0,6,46	0/0:2,0:2:0:0,0,0	0/0:13,0:13:17.12:0,17,110	0/1:5,0:5:0:0,0,0	0/0:6,0:6:14.91:0,15,147	0/0:9,0:9:21:0,21,218	0/0:2,0:2:5.99:0,6,48
chr10	91881892	.	CCGG	C	7870.68	PASS	AB=0.944;AC=21;AF=0.375;AN=56;BaseQRankSum=14.153;DP=564;FS=2.461;HRun=0;HaplotypeScore=83.9012;InbreedingCoeff=0.9178;MQ=78.81;MQ0=0;MQRankSum=-3.484;QD=36.95;ReadPosRankSum=0.101;VQSLOD=5.0728;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,2498	0/0:9,0:9:24.08:0,24,518	0/0:12,0:12:27.09:0,27,571	0/0:15,0:15:16.41:0,16,620	1/1:2,11:13:27.09:440,27,0	0/0:26,0:26:78.18:0,78,1590	0/0:36,0:36:99:0,105,2313	1/1:3,21:24:63.22:1028,63,0	1/1:0,24:24:66.23:1078,66,0	0/0:15,0:15:42.14:0,42,886	0/0:5,0:5:12.04:0,12,200	1/1:1,21:22:66.23:1077,66,0	0/0:20,0:20:57.20:0,57,1272	0/0:23,0:23:69.21:0,69,1453	0/0:20,0:20:51.18:0,51,1139	0/1:16,1:17:12.72:13,0,701	0/0:38,0:38:99:0,111,2429	0/0:26,0:26:75.26:0,75,1668	1/1:3,27:30:81.24:1272,81,0	1/1:3,12:15:24.08:392,24,0	1/1:3,23:26:48.16:784,48,0	0/0:10,0:10:24.04:0,24,481	0/0:10,0:10:27.05:0,27,506	0/0:29,0:29:81.28:0,81,1809	0/0:17,0:17:42.11:0,42,846	1/1:2,20:22:57.18:906,57,0	1/1:0,13:13:39.13:636,39,0	1/1:2,5:7:15.05:245,15,0
chr10	91882839	.	ATTG	A	8237.94	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.038;DP=648;FS=0.322;HRun=0;HaplotypeScore=97.0107;InbreedingCoeff=0.9842;MQ=80.87;MQ0=1;MQRankSum=-5.471;QD=38.32;ReadPosRankSum=-0.486;VQSLOD=5.4621;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,2298	0/0:6,0:6:12.04:0,12,268	0/0:22,0:22:57.18:0,57,1174	0/0:18,0:18:39.67:0,40,920	1/1:3,12:15:30.06:461,30,0	0/0:28,0:28:81.28:0,81,1772	0/0:30,0:30:84.29:0,84,1873	1/1:3,24:27:66.21:1049,66,0	1/1:1,26:27:69.24:1127,69,0	0/0:36,0:35:96.32:0,96,2042	0/0:12,0:12:36.12:0,36,800	1/1:2,25:27:63.03:1029,63,0	0/0:22,0:22:66.20:0,66,1395	0/0:21,0:21:60.21:0,60,1322	0/0:31,0:31:87.30:0,87,1930	0/0:26,1:27:29.25:0,29,1584	0/0:40,0:40:99:0,117,2586	0/0:32,0:32:90.31:0,90,2007	1/1:2,17:19:51.13:798,51,0	1/1:0,10:10:30.05:439,30,0	1/1:2,32:34:69.66:1099,70,0	0/0:15,0:15:42.14:0,42,939	0/0:10,0:10:30.10:0,30,670	0/0:27,0:27:81.28:0,81,1810	0/0:19,0:19:54.19:0,54,1206	1/1:3,24:27:8.21:1099,8,0	1/1:1,18:19:54.05:795,54,0	1/1:0,10:10:21.07:343,21,0
chr10	91884722	.	GGGGCTCC	G	3211.27	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.098;DP=468;FS=20.082;HRun=0;HaplotypeScore=136.3176;InbreedingCoeff=0.9405;MQ=81.10;MQ0=0;MQRankSum=-9.728;QD=65.54;ReadPosRankSum=1.157;VQSLOD=2.3384;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.19:0,63,2425	0/0:12,0:12:36.12:0,36,1444	0/0:15,0:16:9.67:0,10,1233	0/0:17,0:17:42.02:0,42,1377	0/0:12,0:12:33.10:0,33,1261	1/1:0,16:16:42.14:1156,42,0	1/1:0,18:18:45.15:1213,45,0	0/0:18,0:18:54.19:0,54,2193	0/0:15,0:15:42.13:0,42,1653	0/0:16,0:16:45.15:0,45,1709	0/0:2,0:2:6.02:0,6,250	0/0:19,0:19:57.16:0,57,1977	0/0:15,0:15:45.11:0,45,1607	0/0:16,0:16:48.14:0,48,1807	0/0:28,0:28:84.29:0,84,3388	1/1:0,15:15:36.12:985,36,0	0/0:36,0:36:99:0,105,3807	0/0:32,0:32:93.26:0,93,3591	0/0:7,0:7:18.05:0,18,611	0/0:10,0:10:30.10:0,30,1146	0/0:30,0:30:90.24:0,90,3256	0/0:12,0:12:36.11:0,36,1376	0/0:7,0:7:18.06:0,18,669	0/0:29,0:29:87.28:0,87,3254	0/0:12,0:12:33.09:0,33,1171	0/0:10,0:10:30.10:0,30,1259	0/0:18,0:18:54.19:0,54,2165	0/0:9,0:9:27.09:0,27,1066
chr10	91885477	.	ATG	A	10068.22	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=9.497;DP=972;FS=0.876;HRun=0;HaplotypeScore=174.1511;InbreedingCoeff=0.9998;MQ=61.09;MQ0=4;MQRankSum=-1.290;QD=29.88;ReadPosRankSum=1.572;VQSLOD=6.3061;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,111,1802	0/0:13,0:13:27.08:0,27,432	0/0:54,0:43:73.04:0,73,1433	0/0:54,0:43:99:0,100,1455	1/1:2,22:24:63.20:819,63,0	0/0:36,0:36:93.28:0,93,1508	0/0:38,0:38:78.27:0,78,1307	1/1:6,34:39:95.97:1248,96,0	1/1:3,46:49:99:1521,117,0	0/0:58,0:58:99:0,150,2494	0/0:16,0:16:42.14:0,42,694	1/1:5,29:34:63.02:798,63,0	0/0:29,0:29:75.26:0,75,1274	0/0:29,0:29:66.23:0,66,1121	0/0:55,0:54:99:0,135,2259	0/0:26,0:26:72.25:0,72,1214	0/0:30,0:30:69.19:0,69,1236	0/0:31,0:31:45.15:0,45,750	1/1:4,18:20:54.16:688,54,0	1/1:4,25:29:57.18:741,57,0	1/1:12,33:44:87.28:1131,87,0	0/0:30,0:30:72.19:0,72,1219	0/0:25,0:25:39.12:0,39,662	0/0:35,0:35:62.40:0,62,1030	0/0:29,0:29:57.20:0,57,969	1/1:1,34:35:51.27:1214,51,0	1/1:2,30:32:78.25:1010,78,0	1/1:1,26:27:69.22:897,69,0
chr10	91885542	.	TTGTGAGTG	T	7059.44	PASS	AB=0.983;AC=35;AF=0.625;AN=56;BaseQRankSum=-1.604;DP=830;FS=0.000;HRun=0;HaplotypeScore=265.1839;InbreedingCoeff=-0.1797;MQ=49.98;MQ0=24;MQRankSum=-2.065;QD=10.54;ReadPosRankSum=-2.168;VQSLOD=3.2787;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:77:0,77,1641	0/1:13,0:14:35.81:36,0,491	0/0:62,0:27:65.51:0,66,717	0/0:52,0:23:53.11:0,53,456	0/1:16,0:18:50.52:116,0,51	0/1:27,0:27:99:134,0,143	0/1:35,0:35:99:150,0,207	1/1:28,0:25:32.99:441,33,0	0/1:29,0:29:43.22:257,0,43	1/1:28,5:34:84.04:1206,84,0	1/1:3,17:20:11.97:224,12,0	0/1:28,0:29:71.79:72,0,91	1/1:18,3:22:41.89:646,42,0	1/1:20,6:28:45:383,45,0	0/1:35,0:34:99:268,0,506	0/1:30,0:30:99:224,0,157	0/1:31,0:31:99:189,0,823	1/1:1,21:22:9.03:251,9,0	0/1:16,0:14:26.78:225,0,27	0/1:21,0:21:56.84:115,0,57	0/1:55,0:52:99:377,0,272	1/1:5,22:27:11.18:131,11,0	1/1:0,15:16:5.59:166,6,0	1/1:29,0:29:37.55:499,38,0	1/1:5,27:34:5.57:420,6,0	0/1:36,1:34:99:309,0,125	0/1:16,0:15:32.72:146,0,33	0/1:12,0:13:41.51:74,0,42
chr10	91885543	.	TGTGA	T	8444.36	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=3.388;DP=816;FS=8.111;HRun=0;HaplotypeScore=217.9984;InbreedingCoeff=0.5707;MQ=49.91;MQ0=24;MQRankSum=-1.350;QD=14.97;ReadPosRankSum=0.561;VQSLOD=2.9987;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:75.56:0,76,959	0/1:15,0:15:78.88:79,0,213	0/0:62,0:27:65.48:0,65,674	0/0:51,0:22:53.11:0,53,456	1/1:15,3:18:29.99:319,30,0	0/0:27,0:27:8.82:0,9,191	0/0:36,0:36:1.91:0,2,235	1/1:4,23:24:66.18:553,66,0	1/1:20,6:28:42.49:692,42,0	1/1:33,0:32:84.05:828,84,0	1/1:19,0:19:8.02:78,8,0	1/1:25,5:29:39.57:495,40,0	1/1:23,0:22:38.44:338,38,0	1/1:27,0:27:33.61:246,34,0	0/1:33,0:32:99:275,0,188	0/0:30,0:30:4.08:0,4,177	0/1:30,0:30:99:305,0,288	1/1:22,0:22:9.03:109,9,0	1/1:14,1:14:8.08:263,8,0	1/1:13,8:21:35.81:422,36,0	1/1:46,9:52:99:1166,108,0	1/1:26,0:26:5.82:54,6,0	1/1:16,0:16:5.58:72,6,0	1/1:29,0:28:8.70:251,9,0	1/1:33,0:33:15.05:180,15,0	1/1:28,8:33:89.28:1024,89,0	1/1:15,1:15:38.74:370,39,0	1/1:8,3:11:27.01:329,27,0
chr10	91885545	.	TGA	T	7038.74	PASS	AB=0.949;AC=41;AF=0.732;AN=56;BaseQRankSum=3.674;DP=807;FS=3.565;HRun=0;HaplotypeScore=203.8697;InbreedingCoeff=0.6624;MQ=49.50;MQ0=26;MQRankSum=-0.788;QD=12.52;ReadPosRankSum=-0.796;VQSLOD=4.1021;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,1:44:20.53:0,21,626	0/1:14,1:15:54.14:114,0,54	0/0:59,0:24:65.48:0,65,674	0/0:50,0:21:53.11:0,53,456	1/1:17,1:18:29.89:238,30,0	0/0:26,0:26:28.40:0,28,205	0/0:35,0:35:19.78:0,20,263	1/1:26,0:23:67.28:524,67,0	1/1:25,0:27:46.74:479,47,0	1/1:32,0:31:82.92:712,83,0	1/1:19,0:19:7.21:47,7,0	1/1:30,1:30:39.74:303,40,0	1/1:21,2:21:37.50:262,38,0	1/1:27,0:27:35.50:265,35,0	0/1:32,1:32:38.53:365,0,39	0/0:30,0:30:29.13:0,29,219	0/1:29,2:31:69.54:458,0,70	1/1:22,0:22:8.95:67,9,0	1/1:16,0:14:11.04:244,11,0	1/1:20,0:20:35.74:279,36,0	1/1:57,1:56:99:968,119,0	1/1:25,1:25:5.92:40,6,0	1/1:16,0:16:5.48:44,5,0	1/1:26,0:25:34.18:266,34,0	1/1:31,0:31:14.91:110,15,0	1/1:35,0:32:92.60:731,93,0	1/1:17,0:16:38.69:286,39,0	1/1:12,0:12:29.93:241,30,0
chr10	91885547	.	AGTGTGTGT	A	2866.42	PASS	AB=1.000;AC=23;AF=0.426;AN=54;BaseQRankSum=0.552;DP=809;FS=16.783;HRun=0;HaplotypeScore=275.5225;InbreedingCoeff=0.5717;MQ=49.24;MQ0=28;MQRankSum=-5.585;QD=7.39;ReadPosRankSum=-1.376;VQSLOD=0.8845;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:52.66:0,53,1329	0/0:15,0:15:27.09:0,27,760	0/0:58,0:23:3.01:0,3,43	./.	0/0:18,0:19:18.05:0,18,258	1/1:15,11:27:14.88:263,15,0	1/1:21,16:37:17.93:292,18,0	0/0:30,0:24:14.51:0,15,145	0/0:26,0:26:26.95:0,27,305	1/1:33,0:32:24.86:572,25,0	1/1:19,0:19:8.91:154,9,0	0/0:32,0:32:32.71:0,33,363	1/1:21,0:19:21.54:376,22,0	0/1:26,0:26:10.82:67,0,11	0/0:31,0:30:27.09:0,27,806	1/1:14,17:31:24.08:415,24,0	0/0:30,0:30:51.13:0,51,1304	1/1:21,0:21:9.03:190,9,0	0/1:17,0:15:37.77:38,0,241	0/0:19,0:19:17.74:0,18,228	0/1:58,0:55:11.16:11,0,824	0/1:25,0:24:0.92:61,0,1	0/1:16,0:16:8.82:122,0,9	1/1:26,0:25:4.57:186,5,0	1/1:31,0:31:2.35:312,2,0	0/0:36,0:33:22.48:0,22,627	0/0:17,0:16:17.79:0,18,213	0/0:12,0:12:14.74:0,15,207
chr10	91887136	.	CCGG	C	700.85	PASS	AB=0.967;AC=12;AF=0.214;AN=56;BaseQRankSum=7.010;DP=378;FS=14.691;HRun=0;HaplotypeScore=81.3032;InbreedingCoeff=-0.1298;MQ=77.18;MQ0=3;MQRankSum=-1.647;QD=4.61;ReadPosRankSum=7.455;VQSLOD=-0.2019;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:31.64:0,32,290	0/0:3,0:3:5.95:0,6,42	0/0:21,0:14:23.63:0,24,263	0/0:18,0:9:0.64:0,1,32	0/0:9,0:9:17.92:0,18,154	0/0:13,0:13:11.04:0,11,49	0/1:26,0:26:3.51:4,0,75	0/0:6,0:6:17.99:0,18,181	0/0:5,0:5:14.92:0,15,117	0/1:16,1:18:78.04:146,0,78	0/1:9,0:9:31.24:60,0,31	0/0:11,0:11:32.83:0,33,287	0/1:12,1:13:36.97:145,0,37	0/1:12,1:13:85.62:86,0,134	0/0:11,0:11:8.79:0,9,135	0/0:27,0:27:34.61:0,35,203	0/0:13,0:13:27.32:0,27,185	0/1:18,0:18:47.63:139,0,48	0/1:8,0:8:14.80:15,0,174	0/0:3,0:3:6:0,6,53	0/0:42,0:42:97.37:0,97,857	0/1:4,0:4:15.08:44,0,15	1/1:3,0:3:5.10:23,5,0	0/1:30,0:30:99:117,0,140	0/1:9,1:10:69.99:70,0,104	0/0:8,0:8:16.18:0,16,121	0/0:11,0:11:29.62:0,30,233	0/0:10,0:10:13.08:0,13,170
chr10	91887137	.	CGGG	C	2857.84	PASS	AB=0.773;AC=28;AF=0.500;AN=56;BaseQRankSum=3.410;DP=382;FS=4.311;HRun=13;HaplotypeScore=75.1175;InbreedingCoeff=0.5472;MQ=75.83;MQ0=3;MQRankSum=-2.059;QD=12.43;ReadPosRankSum=5.461;VQSLOD=1.0191;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:14:3.48:0,3,54	0/0:3,0:3:0:0,0,0	0/0:19,0:13:15.43:0,15,191	0/1:18,0:9:1.23:1,0,8	0/0:8,0:8:2.99:0,3,23	1/1:1,0:13:32.32:195,32,0	1/1:3,0:26:52.83:317,53,0	0/0:4,0:6:9:0,9,83	0/0:8,0:8:9.03:0,9,132	1/1:7,8:17:27.53:310,28,0	1/1:2,5:8:14.96:163,15,0	0/0:11,0:13:16.24:0,16,171	1/1:4,8:13:23.99:273,24,0	1/1:7,5:12:0.39:197,0,0	0/1:3,2:11:21.42:58,0,21	1/1:8,0:28:50.62:358,51,0	0/0:8,0:13:7.97:0,8,33	1/1:4,13:18:36.02:419,36,0	0/1:6,1:8:27.36:27,0,58	0/0:2,0:4:2.99:0,3,23	0/0:33,0:42:22.85:0,23,151	1/1:1,3:4:9.02:109,9,0	1/1:1,1:3:5.93:53,6,0	1/1:9,18:31:38.60:398,39,0	1/1:6,4:10:12.03:144,12,0	0/0:5,0:7:7.24:0,7,53	0/0:9,0:13:14.45:0,14,161	0/1:6,1:10:24.48:24,0,84
chr10	91887371	.	G	GA	3982.52	PASS	AB=0.708;AC=39;AF=0.696;AN=56;BaseQRankSum=-4.219;DP=520;FS=0.471;HRun=13;HaplotypeScore=63.5436;InbreedingCoeff=0.4879;MQ=71.49;MQ0=2;MQRankSum=-0.967;QD=9.55;ReadPosRankSum=-2.893;VQSLOD=2.1144;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,1:39:37.95:0,38,478	1/1:0,0:5:8.52:43,9,0	0/1:30,0:17:0.02:0,0,57	0/0:9,0:7:6.18:0,6,37	0/1:5,16:21:5.16:223,0,5	0/0:5,0:21:31.48:0,31,102	0/0:2,0:12:21.31:0,21,74	1/1:9,11:20:29.07:224,29,0	1/1:2,10:12:12:107,12,0	0/1:11,3:14:5.61:88,0,6	0/1:8,7:15:2.62:104,0,3	1/1:17,6:24:33:375,33,0	0/1:7,11:19:2.26:104,0,2	1/1:3,12:15:3.38:164,3,0	1/1:2,0:10:8.52:43,9,0	0/0:5,0:21:29.39:0,29,97	1/1:7,0:34:28.47:145,28,0	0/1:11,16:27:20.41:177,0,20	1/1:10,13:23:21.46:323,21,0	1/1:1,14:15:35.96:314,36,0	1/1:3,10:14:14.85:126,15,0	1/1:5,12:18:32.86:289,33,0	1/1:7,6:13:15.75:187,16,0	1/1:3,10:14:14.79:234,15,0	1/1:5,9:16:13.55:133,14,0	1/1:10,7:19:28.45:224,28,0	1/1:16,6:22:13.23:234,13,0	0/1:7,9:16:2.56:121,0,3
chr10	91887637	.	CTGTGCCACAGGCTGGT	C	36869.44	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=14.489;DP=608;FS=2.115;HRun=0;HaplotypeScore=300.2036;InbreedingCoeff=0.9876;MQ=71.80;MQ0=0;MQRankSum=-16.508;QD=83.60;ReadPosRankSum=5.444;VQSLOD=4.0599;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,10223	1/1:1,7:8:18.06:851,18,0	0/0:21,0:21:60.21:0,60,3833	0/0:23,0:23:63.17:0,63,2893	1/1:1,16:16:15.52:659,16,0	0/0:20,0:20:57.20:0,57,4372	0/0:28,0:28:78.25:0,78,5463	1/1:16,12:28:36.07:1050,36,0	1/1:8,24:32:66.23:3122,66,0	1/1:2,21:23:60.18:2700,60,0	1/1:4,15:19:27.09:1057,27,0	1/1:0,30:30:75.26:3542,75,0	1/1:4,19:23:39.13:1844,39,0	1/1:3,18:22:57.20:2696,57,0	1/1:3,34:38:90.31:4255,90,0	0/0:26,0:26:78.25:0,78,5788	1/1:2,15:17:33.57:1511,34,0	1/1:2,8:10:21.07:994,21,0	1/1:5,10:15:31.91:1307,32,0	1/1:2,11:13:18.53:783,19,0	1/1:6,17:23:22.01:901,22,0	1/1:2,16:18:39.13:1773,39,0	1/1:1,15:16:20.78:921,21,0	1/1:9,22:31:30.53:1155,31,0	1/1:4,13:17:24.08:1066,24,0	1/1:0,13:13:39.12:1727,39,0	1/1:1,18:19:48.16:2244,48,0	1/1:2,7:8:15.05:710,15,0
chr10	91888566	.	A	AT	2319.80	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-12.631;DP=626;FS=2.321;HRun=4;HaplotypeScore=62.3389;InbreedingCoeff=0.9965;MQ=89.80;MQ0=0;MQRankSum=-1.205;QD=33.62;ReadPosRankSum=1.042;VQSLOD=4.3323;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.27:0,96,1089	0/0:6,0:6:18.04:0,18,195	0/0:21,0:21:57.15:0,57,632	0/0:29,0:29:62.95:0,63,681	0/0:22,0:22:63.16:0,63,703	1/1:2,21:23:57.19:780,57,0	1/1:0,25:25:66.22:903,66,0	0/0:27,0:27:69.17:0,69,767	0/0:24,0:24:63.16:0,63,705	0/0:27,0:27:72.20:0,72,817	0/0:17,0:17:45.10:0,45,493	0/0:27,0:27:81.23:0,81,919	0/0:20,0:20:60.17:0,60,680	0/0:27,0:27:81.20:0,81,900	0/0:20,0:20:60.17:0,60,681	1/1:0,21:21:57.19:780,57,0	0/0:27,0:27:69.19:0,69,783	0/0:37,0:37:99:0,108,1214	0/0:30,0:30:84.13:0,84,909	0/0:13,0:13:36.10:0,36,408	0/0:35,0:35:99:0,102,1157	0/0:13,0:13:30.08:0,30,340	0/0:18,0:18:48.14:0,48,544	0/0:20,0:20:57.16:0,57,647	0/0:14,0:14:39.11:0,39,442	0/0:23,0:23:66.19:0,66,749	0/0:16,0:15:42.12:0,42,476	0/0:9,0:9:27.08:0,27,306
chr10	91890394	.	T	TG	5370.92	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-6.938;DP=579;FS=0.747;HRun=8;HaplotypeScore=77.9762;InbreedingCoeff=0.9640;MQ=79.30;MQ0=0;MQRankSum=-2.284;QD=23.15;ReadPosRankSum=2.759;VQSLOD=5.5220;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:82.82:0,83,741	1/1:6,0:6:5.99:49,6,0	0/0:12,0:12:18.79:0,19,205	0/0:14,0:14:24:0,24,216	0/0:15,0:15:30.44:0,30,266	0/0:1,0:12:18.33:0,18,54	0/0:5,0:38:57.03:0,57,168	0/0:18,0:18:39:0,39,354	0/0:21,0:21:57.01:0,57,517	1/1:3,20:23:51.11:566,51,0	1/1:1,8:9:11.63:138,12,0	0/0:34,0:34:72.01:0,72,654	1/1:2,19:21:54.16:623,54,0	1/1:3,29:32:84.21:953,84,0	1/1:9,17:26:12.05:352,12,0	0/0:4,0:18:27.91:0,28,100	1/1:7,20:27:38.31:524,38,0	1/1:7,17:26:53.82:583,54,0	0/0:16,0:16:32.68:0,33,273	0/0:13,0:13:35.24:0,35,309	0/0:53,0:53:99:0,123,1092	1/1:4,10:14:33.09:370,33,0	1/1:1,4:5:8.99:104,9,0	1/1:3,27:30:72.21:831,72,0	1/1:2,11:13:24.07:277,24,0	0/0:19,0:19:46.92:0,47,402	0/0:21,0:21:51.02:0,51,467	0/0:8,0:8:18.01:0,18,165
chr10	91895012	.	ATCTCTCTCTCTC	A	3013.46	PASS	AB=0.970;AC=25;AF=0.481;AN=52;BaseQRankSum=6.737;DP=575;FS=24.428;HRun=0;HaplotypeScore=181.4045;InbreedingCoeff=0.0837;MQ=76.75;MQ0=7;MQRankSum=-4.267;QD=8.84;ReadPosRankSum=-1.381;VQSLOD=0.9237;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:32:39.99:0,40,850	0/0:7,0:7:4.23:0,4,26	./.	0/0:44,0:26:0.47:0,0,1	0/0:21,5:25:0.47:0,0,1	1/1:16,0:15:8.02:111,8,0	0/1:30,0:30:13.68:133,0,14	0/1:21,2:22:4.03:70,0,4	1/1:5,15:20:24.08:821,24,0	0/1:18,0:18:0.76:1,0,223	./.	0/1:14,7:21:1.40:181,0,1	0/1:16,0:16:26.51:27,0,32	0/0:17,0:17:16.14:0,16,223	1/1:30,0:30:18.06:532,18,0	1/1:23,0:23:15.05:431,15,0	0/1:27,0:27:13.80:178,0,14	0/1:17,0:17:26.79:27,0,63	1/1:12,4:16:9.01:196,9,0	1/1:8,5:12:3.01:83,3,0	0/0:24,6:30:2.21:0,2,7	0/0:13,0:13:12.03:0,12,155	0/0:18,0:18:17.82:0,18,145	0/1:22,0:22:99:149,0,214	0/1:10,0:10:15.98:16,0,68	0/1:14,0:14:20.50:42,0,20	1/1:15,2:17:5.53:135,6,0	0/1:8,0:8:12.28:39,0,12
chr10	91895046	.	CTCTCTCTCTCTCTCTG	C	2258.48	PASS	AB=0.961;AC=21;AF=0.375;AN=56;BaseQRankSum=8.621;DP=625;FS=9.980;HRun=0;HaplotypeScore=192.4312;InbreedingCoeff=-0.0049;MQ=58.49;MQ0=15;MQRankSum=-3.496;QD=6.51;ReadPosRankSum=3.406;VQSLOD=1.8023;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,100,3208	0/1:11,0:11:14.65:15,0,77	0/0:33,0:11:30.59:0,31,256	0/0:62,0:22:26.62:0,27,270	0/0:17,0:16:20.99:0,21,224	1/1:14,0:13:21.38:249,21,0	0/1:3,31:34:22.10:238,0,22	0/0:15,0:13:1.66:0,2,288	0/1:28,0:28:99:150,0,286	0/1:20,0:20:99:182,0,309	1/1:12,0:12:3.83:20,4,0	0/1:20,0:20:1.08:1,0,258	0/0:18,0:18:5.33:0,5,40	0/1:17,0:17:49.28:49,0,294	1/1:32,1:33:18.06:372,18,0	1/1:2,18:20:14.93:699,15,0	0/1:30,0:30:17.13:72,0,17	0/1:18,0:18:10.64:11,0,104	0/1:19,0:17:7.93:8,0,315	0/0:11,0:10:8.17:0,8,162	0/0:28,0:27:41.16:0,41,484	0/1:11,0:11:21.01:21,0,191	0/0:16,0:16:18.46:0,18,203	0/1:30,1:31:99:262,0,470	0/1:12,0:12:77.77:78,0,154	0/0:25,0:25:14.03:0,14,858	0/1:17,0:17:1.03:1,0,381	0/0:8,0:8:18.28:0,18,268
chr10	91895048	.	CTCTCTCTCTCTCTG	C	2684.38	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=9.469;DP=622;FS=9.901;HRun=0;HaplotypeScore=175.5432;InbreedingCoeff=-0.0292;MQ=59.73;MQ0=15;MQRankSum=-2.479;QD=7.22;ReadPosRankSum=4.946;VQSLOD=1.7877;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,103,2583	0/1:11,0:11:30.25:44,0,30	0/0:36,0:12:32.43:0,32,287	0/0:62,0:22:31.76:0,32,299	0/0:16,0:15:20.97:0,21,179	0/1:14,0:13:15.55:106,0,16	1/1:34,0:34:9.01:208,9,0	0/0:14,0:12:25.83:0,26,235	0/1:28,0:28:99:317,0,205	0/1:20,0:20:99:236,0,129	1/1:13,0:13:3.83:20,4,0	0/1:21,0:21:56.83:57,0,186	1/1:18,0:18:3:27,3,0	0/1:14,0:14:99:121,0,177	1/1:33,1:34:18.06:488,18,0	1/1:20,0:20:14.68:533,15,0	1/1:31,0:31:8.98:152,9,0	0/1:16,0:16:33.79:34,0,74	0/1:18,0:16:21.56:22,0,227	0/1:10,0:9:11.31:11,0,104	0/0:27,0:26:44.90:0,45,430	0/1:10,0:10:45.88:46,0,77	0/0:10,7:17:18.40:0,18,142	0/1:31,0:31:99:303,0,162	0/1:12,0:12:77.73:85,0,78	0/0:24,0:24:60.03:0,60,584	0/1:17,0:17:51.99:52,0,236	0/0:8,0:8:2.60:0,3,119
chr10	91895050	.	CTCTCTCTCTCTG	C	3955.61	PASS	AB=0.939;AC=29;AF=0.518;AN=56;BaseQRankSum=8.968;DP=628;FS=7.392;HRun=0;HaplotypeScore=160.2664;InbreedingCoeff=-0.0462;MQ=62.86;MQ0=14;MQRankSum=-1.637;QD=9.72;ReadPosRankSum=6.172;VQSLOD=1.4148;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,109,2049	1/1:11,0:11:14.31:174,14,0	0/0:40,0:14:38.66:0,39,340	0/0:65,0:25:40.57:0,41,377	0/0:17,0:17:17:0,17,182	1/1:15,0:14:18.76:141,19,0	1/1:33,0:33:9.02:180,9,0	0/1:14,0:12:5.50:5,0,150	0/1:28,0:28:99:631,0,157	0/1:6,14:20:32.69:282,0,33	1/1:12,0:12:3.83:20,4,0	0/1:20,0:20:99:119,0,165	1/1:18,0:18:3.01:53,3,0	0/1:15,0:15:75.11:113,0,75	1/1:4,30:34:18.06:621,18,0	1/1:19,0:19:14.97:464,15,0	0/1:3,27:30:3.97:214,0,4	0/1:16,0:16:47.47:60,0,47	0/1:18,0:16:93.03:93,0,228	0/1:10,0:9:49.33:49,0,80	0/0:26,0:25:44.88:0,45,359	0/1:11,0:11:36.11:68,0,36	0/1:15,0:15:4.81:5,0,5	0/1:29,1:30:34.04:430,0,34	0/1:12,0:12:24.05:174,0,24	0/0:25,0:25:56.82:0,57,462	0/1:18,0:18:54.55:55,0,215	0/1:8,0:8:3.41:3,0,108
chr10	91895052	.	CTCTCTCTCTG	C	3620.35	PASS	AB=0.922;AC=32;AF=0.571;AN=56;BaseQRankSum=8.452;DP=614;FS=15.672;HRun=0;HaplotypeScore=144.2107;InbreedingCoeff=0.4660;MQ=64.68;MQ0=14;MQRankSum=-1.525;QD=10.03;ReadPosRankSum=3.821;VQSLOD=1.8250;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:98.95:0,99,1587	1/1:10,0:10:17.99:167,18,0	0/0:41,0:16:44.43:0,44,384	0/0:64,0:25:40.32:0,40,342	0/0:17,0:17:26.91:0,27,212	1/1:12,0:11:19.69:153,20,0	1/1:32,0:32:9.02:152,9,0	0/0:14,0:12:22.77:0,23,177	0/1:28,0:28:99:370,0,157	1/1:19,0:19:47.55:399,48,0	1/1:1,11:12:4.30:20,4,0	0/1:21,0:21:54.46:54,0,158	1/1:0,17:17:3.01:98,3,0	1/1:14,0:14:23.06:163,23,0	1/1:32,2:34:18.06:463,18,0	1/1:19,0:19:14.96:394,15,0	1/1:30,0:30:6.02:157,6,0	0/1:2,14:16:20.27:105,0,20	0/1:18,0:16:27.73:28,0,227	0/1:10,0:9:16.63:17,0,80	0/0:26,0:25:47.87:0,48,383	1/1:11,0:11:17.72:128,18,0	0/0:12,0:12:0.45:0,0,1	1/1:28,0:28:50.70:577,51,0	1/1:13,0:13:14.82:157,15,0	0/0:24,0:24:60.42:0,60,488	0/1:17,0:17:15.91:16,0,217	0/0:8,0:8:17.79:0,18,128
chr10	91897595	.	C	CAT	4016.45	PASS	AB=0.861;AC=17;AF=0.304;AN=56;BaseQRankSum=-4.633;DP=447;FS=12.175;HRun=0;HaplotypeScore=73.7644;InbreedingCoeff=0.6771;MQ=74.28;MQ0=10;MQRankSum=-1.889;QD=27.14;ReadPosRankSum=0.038;VQSLOD=4.1120;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:45.03:0,45,616	0/0:5,0:5:14.91:0,15,178	0/0:24,0:17:43.73:0,44,556	0/0:39,0:18:46.11:0,46,534	0/1:17,0:17:25.51:402,0,26	0/0:19,0:19:35.25:0,35,505	0/0:22,0:22:56.81:0,57,682	1/1:21,0:20:57.18:911,57,0	1/1:8,1:9:14.88:209,15,0	0/0:12,0:12:35.14:0,35,462	0/0:5,0:5:11.91:0,12,145	0/1:4,10:14:23.20:65,0,23	0/0:11,0:10:19.81:0,20,238	0/0:6,0:6:13.29:0,13,175	0/0:16,0:16:42.86:0,43,521	0/0:15,0:15:30.08:0,30,411	0/0:24,0:24:45.02:0,45,597	0/0:18,0:18:44.98:0,45,569	1/1:20,0:19:44.65:704,45,0	1/1:8,0:8:21.07:318,21,0	0/1:22,0:20:21.09:556,0,21	0/0:10,0:10:23.73:0,24,315	0/0:7,0:6:11.91:0,12,144	0/0:30,0:30:73.71:0,74,796	0/0:10,0:10:26.31:0,26,276	1/1:18,0:17:15.88:504,16,0	1/1:11,0:11:6.58:305,7,0	1/1:7,0:6:3.01:43,3,0
chr10	91898241	.	A	AAAATCCTC	2190.35	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-2.358;DP=695;FS=27.004;HRun=0;HaplotypeScore=174.0528;InbreedingCoeff=0.9655;MQ=79.61;MQ0=0;MQRankSum=-7.042;QD=42.95;ReadPosRankSum=-1.033;VQSLOD=1.5964;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:87.30:0,87,2221	1/1:11,1:12:9.01:263,9,0	0/0:22,0:22:15.01:0,15,308	0/0:20,0:20:15.05:0,15,312	0/0:12,0:12:30.10:0,30,761	0/0:30,0:30:60.21:0,60,1532	0/0:30,0:30:45.14:0,45,1071	0/0:32,0:32:36.12:0,36,915	0/0:32,0:32:72.25:0,72,1781	0/0:29,0:29:75.25:0,75,1797	0/0:17,0:17:48.15:0,48,1166	0/0:29,0:29:60.19:0,60,1472	0/0:23,0:23:48.16:0,48,1187	0/0:25,0:25:63.20:0,63,1507	1/1:11,8:19:30.10:1195,30,0	0/0:25,0:25:63.19:0,63,1455	1/1:15,5:20:21.07:869,21,0	0/0:18,0:18:36.11:0,36,836	0/0:25,0:25:42.14:0,42,1022	0/0:21,0:21:39.13:0,39,961	0/0:48,0:48:87.25:0,87,2015	0/0:18,0:18:36.12:0,36,917	0/0:25,0:25:54.19:0,54,1361	0/0:32,0:32:69.24:0,69,1733	0/0:21,0:21:60.21:0,60,1521	0/0:27,0:27:51.18:0,51,1286	0/0:25,0:23:60.21:0,60,1527	0/0:13,0:13:39.13:0,39,994
chr10	91898274	.	A	AC	2237.37	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-9.263;DP=678;FS=11.699;HRun=6;HaplotypeScore=75.2060;InbreedingCoeff=0.8943;MQ=72.95;MQ0=0;MQRankSum=-2.668;QD=19.46;ReadPosRankSum=1.201;VQSLOD=2.2547;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,105,1064	1/1:2,0:4:2.84:15,3,0	0/0:20,0:21:52.45:0,52,487	0/0:17,0:17:37.23:0,37,347	0/0:23,0:23:57.11:0,57,574	1/1:2,26:28:66.21:830,66,0	1/1:4,30:34:72.23:903,72,0	0/0:27,0:27:57.09:0,57,566	0/0:28,0:28:81.18:0,81,825	0/0:32,0:32:75.15:0,75,758	0/0:24,0:24:60.13:0,60,611	0/0:27,0:27:81.16:0,81,812	0/0:28,0:28:81.18:0,81,824	0/0:26,0:26:69.12:0,69,692	1/1:13,0:13:6.15:29,6,0	1/1:3,18:21:48.15:604,48,0	1/1:13,0:15:1.65:22,2,0	0/0:16,0:16:36.07:0,36,367	0/0:25,0:25:60.13:0,60,611	0/0:21,0:21:42.08:0,42,428	0/0:41,0:41:99:0,111,1119	0/0:17,0:17:48.10:0,48,487	0/0:21,0:21:54.12:0,54,549	0/0:32,0:32:90.20:0,90,918	0/0:26,0:26:78.18:0,78,795	0/0:30,0:30:87.19:0,87,882	0/0:26,0:25:69.15:0,69,703	0/0:16,0:16:33.07:0,33,337
chr10	91899959	.	CGATCTCAGT	C	5045.57	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.272;DP=674;FS=11.799;HRun=0;HaplotypeScore=222.3215;InbreedingCoeff=0.9983;MQ=85.98;MQ0=0;MQRankSum=-12.215;QD=77.62;ReadPosRankSum=1.772;VQSLOD=3.8508;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,5823	0/0:12,0:12:36.11:0,36,1625	0/0:30,0:31:78.26:0,78,3296	0/0:20,0:21:60.16:0,60,2222	0/0:22,0:22:60.21:0,60,2839	1/1:2,19:21:54.19:1651,54,0	1/1:1,23:24:57.20:1743,57,0	0/0:29,0:29:81.26:0,81,3480	0/0:27,0:27:81.25:0,81,3385	0/0:20,0:20:60.21:0,60,2856	0/0:15,0:15:42.13:0,42,1888	0/0:19,0:19:57.20:0,57,2617	0/0:14,0:14:39.13:0,39,1848	0/0:22,0:22:66.21:0,66,2987	0/0:33,0:33:96.30:0,96,4248	1/1:1,19:20:54.19:1652,54,0	0/0:35,0:35:99:0,99,4694	0/0:39,0:39:99:0,117,5359	0/0:18,0:18:54.19:0,54,2547	0/0:22,0:22:60.21:0,60,2837	0/0:44,0:44:99:0,132,6069	0/0:23,0:23:69.24:0,69,3280	0/0:11,0:11:30.10:0,30,1460	0/0:38,0:38:99:0,105,5072	0/0:16,0:16:48.16:0,48,2151	0/0:23,0:23:66.23:0,66,3191	0/0:23,0:23:69.22:0,69,3195	0/0:7,0:7:21.07:0,21,920
chr10	91900898	.	GC	G	5711.63	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=4.176;DP=565;FS=4.205;HRun=2;HaplotypeScore=97.3391;InbreedingCoeff=0.9987;MQ=77.26;MQ0=0;MQRankSum=-4.641;QD=33.40;ReadPosRankSum=2.594;VQSLOD=4.8975;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1657	0/0:8,0:8:24.08:0,24,360	0/0:14,0:15:45.11:0,45,603	0/0:14,0:14:39.09:0,39,511	0/0:24,0:24:66.11:0,66,922	0/0:26,0:26:72.24:0,72,1078	0/0:23,0:23:54:0,54,770	0/0:23,0:23:69.22:0,69,1013	0/0:21,0:21:54.15:0,54,768	1/1:0,20:20:60.15:734,60,0	1/1:0,19:19:48.16:622,48,0	0/0:17,0:17:45.15:0,45,674	1/1:0,19:19:54.18:698,54,0	1/1:2,22:24:69.14:857,69,0	0/0:22,0:22:51.17:0,51,763	0/0:22,0:22:63.20:0,63,924	0/0:31,0:31:93.26:0,93,1344	1/1:0,7:7:21.07:273,21,0	0/0:18,0:18:48.16:0,48,718	0/0:18,0:18:54.17:0,54,789	0/0:21,0:21:60.14:0,60,899	1/1:0,23:23:57.14:720,57,0	1/1:0,20:20:36.12:467,36,0	1/1:0,9:9:24.08:311,24,0	1/1:0,30:30:81.20:1029,81,0	0/0:23,0:23:69.23:0,69,1017	0/0:14,0:14:39.10:0,39,561	0/0:15,0:15:42.14:0,42,629
chr10	91900933	.	CT	C	11627.94	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=5.398;DP=483;FS=0.000;HRun=6;HaplotypeScore=81.3823;InbreedingCoeff=0.7882;MQ=72.01;MQ0=0;MQRankSum=-5.604;QD=26.43;ReadPosRankSum=2.202;VQSLOD=5.1008;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.25:0,78,1021	1/1:1,3:4:6.01:64,6,0	0/0:17,0:17:47.59:0,48,477	0/1:15,0:15:6.63:7,0,234	1/1:1,20:21:57.07:594,57,0	1/1:1,22:23:56.98:612,57,0	1/1:1,21:22:51.13:548,51,0	1/1:2,22:24:66.13:691,66,0	1/1:0,13:13:33.08:355,33,0	1/1:3,14:17:45.11:478,45,0	1/1:4,14:18:42.10:451,42,0	1/1:0,14:14:33.08:352,33,0	1/1:4,11:15:39.09:418,39,0	1/1:4,20:24:65.49:667,65,0	1/1:1,23:24:54.14:580,54,0	1/1:1,11:12:33.08:355,33,0	1/1:1,23:24:66.17:708,66,0	1/1:2,7:9:24.01:244,24,0	1/1:4,13:17:39.09:413,39,0	1/1:0,16:16:45.05:468,45,0	1/1:1,12:13:36.09:387,36,0	1/1:5,12:17:48.10:499,48,0	1/1:2,14:16:45.09:472,45,0	1/1:1,8:9:26.62:253,27,0	1/1:3,18:21:54.13:579,54,0	1/1:1,24:25:72.14:756,72,0	1/1:0,12:12:33.08:355,33,0	1/1:3,12:15:30.08:322,30,0
chr10	91901168	.	T	TGTAA	12299.21	PASS	AB=0.909;AC=21;AF=0.375;AN=56;BaseQRankSum=-8.571;DP=543;FS=0.742;HRun=0;HaplotypeScore=98.5040;InbreedingCoeff=0.9193;MQ=57.61;MQ0=7;MQRankSum=-8.967;QD=59.13;ReadPosRankSum=-0.359;VQSLOD=6.3294;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:33:90.29:0,90,1760	0/0:9,0:9:18.06:0,18,360	0/0:15,0:14:39.13:0,39,767	0/0:26,0:22:63.22:0,63,1222	1/1:2,8:9:24.08:578,24,0	0/0:10,0:10:24.06:0,24,479	0/0:28,0:28:81.26:0,81,1583	1/1:12,19:32:81.23:2169,81,0	1/1:4,15:20:51.10:1297,51,0	0/0:15,0:15:39.13:0,39,779	0/0:9,0:8:15.42:0,15,289	1/1:2,21:24:57.20:1572,57,0	0/0:20,0:20:60.21:0,60,1198	0/0:20,0:20:57.15:0,57,1072	0/0:24,0:23:60.21:0,60,1194	0/1:9,1:10:53.63:54,0,509	0/0:30,0:30:84.29:0,84,1669	0/0:23,0:23:69.19:0,69,1313	1/1:6,15:19:51.18:1390,51,0	1/1:1,9:10:27.09:616,27,0	1/1:5,33:40:92.93:2079,93,0	0/0:12,0:11:27.09:0,27,533	0/0:15,0:15:39.13:0,39,777	0/0:28,0:28:75.26:0,75,1490	0/0:15,0:15:39.13:0,39,779	1/1:5,8:15:36.11:883,36,0	1/1:0,14:14:36.12:1006,36,0	1/1:0,7:10:24.08:656,24,0
chr10	91901362	.	C	CT	525.76	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.253;DP=487;FS=13.404;HRun=10;HaplotypeScore=122.4074;InbreedingCoeff=0.7743;MQ=71.42;MQ0=7;MQRankSum=-1.304;QD=16.96;ReadPosRankSum=0.875;VQSLOD=2.7720;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:92.83:0,93,751	1/1:2,4:6:16.77:143,17,0	0/0:40,0:21:1.81:0,2,244	0/0:64,0:25:5.68:0,6,244	0/0:21,0:21:32.91:0,33,266	0/0:14,0:14:0.65:0,1,117	0/0:19,0:19:21.57:0,22,176	0/0:25,0:22:36.51:0,37,336	0/0:11,0:11:19.36:0,19,132	0/0:14,0:13:35.76:0,36,274	0/0:15,0:14:29.85:0,30,232	0/0:10,0:10:17.60:0,18,116	0/0:14,0:14:23.72:0,24,175	0/0:7,0:7:11.80:0,12,77	1/1:4,2:6:15.99:118,16,0	0/0:9,0:9:20.67:0,21,133	1/1:10,9:19:43.20:403,43,0	0/0:10,0:10:20.73:0,21,151	0/0:18,0:19:43.92:0,44,344	0/0:18,0:17:23.77:0,24,177	0/0:9,0:9:8.90:0,9,67	0/0:11,0:11:23.94:0,24,197	0/0:14,0:14:11.84:0,12,84	0/0:19,0:19:26.41:0,26,180	0/0:18,0:18:20.87:0,21,165	0/0:18,0:18:38.45:0,38,271	0/0:10,0:10:20.97:0,21,172	0/0:12,0:12:29.68:0,30,211
chr10	91901369	.	TTTTC	T	1525.90	PASS	AB=0.997;AC=23;AF=0.411;AN=56;BaseQRankSum=9.802;DP=501;FS=17.418;HRun=0;HaplotypeScore=134.2106;InbreedingCoeff=-0.2644;MQ=66.82;MQ0=11;MQRankSum=-8.046;QD=5.41;ReadPosRankSum=3.719;VQSLOD=1.2893;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:99:0,99,1727	1/1:4,2:6:18.05:212,18,0	0/0:41,0:22:2.24:0,2,245	0/0:63,0:24:5.33:0,5,272	0/0:22,0:22:32.70:0,33,265	0/1:17,0:17:20.06:107,0,20	0/1:18,1:18:68.89:97,0,69	0/0:26,0:21:44.47:0,44,374	0/1:12,0:12:44.86:45,0,53	0/1:15,0:14:14.86:15,0,218	0/1:15,0:13:3.82:4,0,167	0/1:11,0:11:31.66:48,0,32	0/1:13,0:13:27.41:27,0,99	0/1:8,0:8:12.85:39,0,13	1/1:3,3:6:18.05:223,18,0	0/1:12,0:12:23.78:64,0,24	1/1:11,6:17:45.12:508,45,0	0/1:11,0:11:29.57:30,0,78	0/1:21,0:19:3.17:3,0,256	0/1:21,0:20:25.79:26,0,101	0/1:7,0:7:24.46:24,0,37	0/0:9,0:9:23.94:0,24,196	0/1:14,0:14:22.08:22,0,37	0/1:19,0:19:47.99:74,0,48	0/0:17,0:17:4.09:0,4,131	0/1:20,0:20:73.30:73,0,110	0/0:7,0:7:20.97:0,21,172	0/1:18,0:17:52.76:53,0,93
chr10	91901388	.	CTTTTCTTTTCTTTTCTT	C	5490.33	PASS	AB=0.998;AC=28;AF=0.500;AN=56;BaseQRankSum=5.546;DP=503;FS=1.678;HRun=0;HaplotypeScore=182.1093;InbreedingCoeff=0.2217;MQ=48.42;MQ0=18;MQRankSum=-6.554;QD=16.29;ReadPosRankSum=3.024;VQSLOD=3.4417;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:78.26:0,78,5367	1/1:8,0:8:17.95:393,18,0	0/0:24,0:9:4.92:0,5,21	0/1:52,0:13:8.58:9,0,224	0/1:22,0:22:47.28:47,0,383	1/1:0,17:17:21.07:1016,21,0	1/1:3,15:17:18.06:852,18,0	0/1:31,0:24:99:204,0,393	0/1:15,0:15:9.92:96,0,10	0/0:14,0:14:19.11:0,19,346	0/0:18,0:15:8.89:0,9,218	1/1:12,0:12:12.01:113,12,0	0/1:13,0:13:1.56:2,0,43	0/0:18,0:18:1.45:0,1,81	1/1:10,0:9:21.02:498,21,0	1/1:0,10:10:15.05:731,15,0	1/1:19,0:19:35.84:651,36,0	0/0:20,0:20:10.66:0,11,172	0/1:21,0:18:99:240,0,162	0/1:22,0:21:70.97:115,0,71	0/1:5,0:5:19.72:20,0,57	0/0:6,0:5:12.04:0,12,206	0/0:22,0:22:19.40:0,19,218	1/1:17,0:17:1.39:9,1,0	0/0:16,0:16:13.54:0,14,220	0/1:19,0:19:54.45:320,0,54	0/1:10,0:10:25.79:26,0,86	1/1:14,0:13:15.02:149,15,0
chr10	91901393	.	CTTTTCTTTTCTT	C	9500.25	PASS	AB=0.762;AC=46;AF=0.821;AN=56;BaseQRankSum=5.096;DP=476;FS=1.335;HRun=0;HaplotypeScore=130.8883;InbreedingCoeff=0.5170;MQ=44.79;MQ0=18;MQRankSum=-5.050;QD=24.68;ReadPosRankSum=0.381;VQSLOD=3.5733;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:87.30:0,87,3938	1/1:5,2:7:15.15:279,15,0	0/0:15,0:4:4.78:0,5,25	0/0:45,0:10:12.77:0,13,196	1/1:0,21:21:35.76:343,36,0	1/1:17,0:17:21.07:638,21,0	1/1:16,1:16:18.06:562,18,0	0/1:27,0:20:73.46:397,0,73	1/1:1,14:15:12.04:442,12,0	0/1:1,0:12:1.05:257,0,1	1/1:3,0:15:8.99:160,9,0	1/1:0,11:11:12.04:445,12,0	1/1:2,0:13:11.78:222,12,0	1/1:3,0:17:11.82:228,12,0	1/1:7,3:9:18.66:384,19,0	1/1:10,0:10:15.05:460,15,0	1/1:12,6:18:28.64:446,29,0	1/1:3,0:19:17.31:252,17,0	1/1:9,11:16:32.92:541,33,0	1/1:2,22:23:29.96:617,30,0	1/1:4,2:6:12.03:243,12,0	0/1:8,0:7:0.68:65,0,1	0/1:2,0:21:1.62:166,0,2	1/1:1,0:17:16.33:415,16,0	1/1:3,0:17:11.65:119,12,0	1/1:2,17:19:46.45:1137,46,0	1/1:8,0:8:14.77:138,15,0	1/1:2,11:12:15.05:546,15,0
chr10	91901403	.	CTT	C	3084.96	PASS	AB=0.872;AC=42;AF=0.750;AN=56;BaseQRankSum=6.038;DP=419;FS=7.437;HRun=10;HaplotypeScore=92.4733;InbreedingCoeff=0.4029;MQ=44.29;MQ0=18;MQRankSum=-5.327;QD=9.05;ReadPosRankSum=1.589;VQSLOD=0.9794;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:78.74:0,79,1210	1/1:2,4:6:12.03:131,12,0	0/0:13,0:3:2.93:0,3,20	0/0:25,0:5:8.97:0,9,82	1/1:21,0:21:15.03:167,15,0	1/1:17,0:17:20.93:174,21,0	1/1:17,0:16:17.93:144,18,0	0/1:7,11:13:11.48:331,0,11	1/1:14,0:14:11.97:97,12,0	0/1:11,0:12:10.08:22,0,10	1/1:16,0:14:5.60:25,6,0	1/1:11,0:11:11.96:92,12,0	1/1:12,0:13:2.15:29,2,0	0/1:16,0:17:6.57:23,0,7	1/1:3,6:8:18.05:197,18,0	1/1:10,0:10:14.91:111,15,0	1/1:7,7:13:21.06:231,21,0	0/1:16,0:18:3.82:24,0,4	1/1:13,0:11:30.06:322,30,0	1/1:22,0:21:26.88:247,27,0	1/1:3,1:4:9:88,9,0	0/0:0,0:6:12.86:0,13,49	0/1:19,0:20:4.56:5,0,32	1/1:16,0:17:16.79:75,17,0	0/1:14,0:15:3.40:7,0,3	1/1:17,0:17:47.96:457,48,0	1/1:0,5:6:14.78:145,15,0	1/1:12,0:12:14.70:103,15,0
chr10	91902190	.	G	GA	1199.18	PASS	AB=0.741;AC=19;AF=0.339;AN=56;BaseQRankSum=-3.438;DP=486;FS=4.137;HRun=14;HaplotypeScore=73.2520;InbreedingCoeff=0.1340;MQ=55.00;MQ0=21;MQRankSum=-1.625;QD=4.85;ReadPosRankSum=-1.751;VQSLOD=1.8180;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:42.54:0,43,272	0/0:5,0:4:5.89:0,6,38	0/0:14,0:3:2.90:0,3,19	0/0:21,0:5:1.12:0,1,15	0/1:16,11:28:19.33:141,0,19	0/1:5,5:10:20.51:88,0,21	0/1:5,4:8:7.23:67,0,7	0/1:11,9:19:21.91:163,0,22	1/1:4,9:13:14.91:117,15,0	0/1:17,0:16:7.85:8,0,70	0/0:19,0:23:24.58:0,25,146	0/1:14,2:16:22.78:62,0,23	0/0:19,0:19:29.40:0,29,192	0/0:12,0:12:14.34:0,14,87	0/0:13,0:14:18.67:0,19,107	0/1:9,7:16:31.15:109,0,31	0/0:28,3:32:30.38:0,30,308	0/0:12,1:15:3.84:0,4,137	1/1:11,1:9:2.15:45,2,0	0/1:11,11:24:47.57:143,0,48	1/1:3,2:11:11.68:81,12,0	0/0:7,0:7:13.85:0,14,83	0/0:11,0:11:11.67:0,12,75	0/0:23,0:23:35.03:0,35,220	0/0:13,0:15:21.67:0,22,127	1/1:15,9:22:3.03:120,3,0	1/1:8,16:24:8.18:99,8,0	0/1:9,8:17:53.71:126,0,54
chr10	91902464	.	GGAAA	G	1307.70	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.599;DP=592;FS=0.000;HRun=0;HaplotypeScore=88.6305;InbreedingCoeff=0.9786;MQ=62.26;MQ0=2;MQRankSum=1.196;QD=21.44;ReadPosRankSum=1.445;VQSLOD=3.1802;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,105,2474	0/0:9,0:9:24.08:0,24,578	0/0:20,0:12:22.85:0,23,384	0/0:13,0:8:12.04:0,12,245	0/0:24,0:24:66.11:0,66,1456	1/1:3,16:19:24.08:414,24,0	1/1:1,25:26:36.12:621,36,0	0/0:26,0:26:60.19:0,60,1235	0/0:21,0:21:57.18:0,57,1332	0/0:31,0:31:81.27:0,81,1894	0/0:22,0:22:57.20:0,57,1336	0/0:16,0:16:42.14:0,42,905	0/0:14,0:14:36.12:0,36,811	0/0:12,0:12:27.09:0,27,676	0/0:21,0:21:54.19:0,54,1256	1/1:3,13:16:23.76:414,24,0	0/0:25,0:25:69.22:0,69,1486	0/0:26,0:27:72.25:0,72,1624	0/0:15,0:15:30.10:0,30,665	0/0:24,0:24:66.22:0,66,1581	0/0:5,0:5:15.02:0,15,300	0/0:11,0:11:27.09:0,27,649	0/0:20,0:20:54.17:0,54,1265	0/0:29,0:29:81.28:0,81,1870	0/0:30,0:30:90.31:0,90,2082	0/0:27,0:27:23.76:0,24,1336	0/0:35,0:34:87.30:0,87,2061	0/0:11,0:11:33.11:0,33,811
chr10	91904047	.	A	AAAAAT	25839.69	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-1.835;DP=506;FS=7.542;HRun=0;HaplotypeScore=123.7139;InbreedingCoeff=0.7782;MQ=66.74;MQ0=3;MQRankSum=-8.251;QD=57.55;ReadPosRankSum=2.121;VQSLOD=5.5667;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:63.18:0,63,1154	1/1:3,7:10:24.08:651,24,0	0/0:30,0:24:45.20:0,45,747	0/1:20,0:11:11.51:12,0,254	1/1:6,18:24:48.16:1362,48,0	1/1:5,6:11:24.08:665,24,0	1/1:11,12:23:51.10:1331,51,0	1/1:7,13:23:24.54:1157,25,0	1/1:4,14:18:45.15:1332,45,0	1/1:14,12:26:60.16:1533,60,0	1/1:7,10:17:36.12:989,36,0	1/1:8,11:19:48.14:1228,48,0	1/1:0,8:9:21.07:624,21,0	1/1:5,8:13:33.06:829,33,0	1/1:5,9:14:36.08:916,36,0	1/1:2,5:7:18.06:514,18,0	1/1:6,23:29:60.12:1713,60,0	1/1:13,18:31:33.26:1621,33,0	1/1:12,5:16:27.08:715,27,0	1/1:3,14:17:45.08:1125,45,0	1/1:6,6:12:15.05:337,15,0	1/1:3,13:16:39.13:1139,39,0	1/1:5,8:13:36.12:1019,36,0	1/1:6,8:14:21.07:626,21,0	1/1:9,13:22:48.10:1275,48,0	1/1:9,15:24:66.23:1838,66,0	1/1:4,10:15:30.10:866,30,0	1/1:1,4:5:15.05:422,15,0
chr10	91904074	.	CAAAAAA	C	7535.75	PASS	AB=0.957;AC=37;AF=0.661;AN=56;BaseQRankSum=-1.758;DP=473;FS=0.945;HRun=14;HaplotypeScore=163.1469;InbreedingCoeff=0.8179;MQ=46.37;MQ0=9;MQRankSum=-2.546;QD=25.04;ReadPosRankSum=1.386;VQSLOD=2.1761;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:29:72.09:0,72,1602	0/0:1,0:7:7.55:0,8,53	0/0:28,0:11:12.63:0,13,82	0/0:32,0:9:9.15:0,9,62	1/1:10,4:14:26.72:322,27,0	0/0:2,0:14:20.27:0,20,116	0/0:3,0:21:34.24:0,34,178	0/1:21,0:21:21.90:283,0,22	1/1:8,7:15:11.98:421,12,0	1/1:6,15:21:56.99:837,57,0	1/1:8,7:15:38.41:378,38,0	1/1:5,8:14:29.80:393,30,0	1/1:6,1:7:14.82:146,15,0	1/1:5,10:14:32.10:447,32,0	0/0:4,0:11:17.29:0,17,92	0/0:3,0:7:5.05:0,5,49	0/0:9,0:21:38.38:0,38,221	1/1:12,21:33:20.85:304,21,0	1/1:8,9:15:41.63:460,42,0	1/1:7,5:12:35.50:401,36,0	1/1:3,12:15:5.97:114,6,0	1/1:7,5:12:2.35:306,2,0	1/1:7,7:14:35.40:379,35,0	1/1:7,9:15:14.56:105,15,0	1/1:6,10:16:44.74:618,45,0	1/1:5,19:23:59.99:1009,60,0	1/1:6,3:10:26.67:291,27,0	1/1:0,7:7:18.06:322,18,0
chr10	91904132	.	CGGTGGCGGCAGT	C	2461.63	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=0.249;DP=246;FS=2.351;HRun=0;HaplotypeScore=105.6716;InbreedingCoeff=0.7039;MQ=71.61;MQ0=1;MQRankSum=-5.150;QD=40.35;ReadPosRankSum=-0.160;VQSLOD=2.8837;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:18.06:0,18,632	1/1:5,2:7:14.33:192,14,0	0/0:5,0:5:5.86:0,6,57	0/0:14,0:12:14.70:0,15,510	0/0:2,0:2:3.01:0,3,159	1/1:7,4:11:18.06:509,18,0	1/1:12,6:18:29.84:670,30,0	0/0:9,0:9:15.05:0,15,495	0/0:4,0:4:11.95:0,12,162	0/0:6,0:6:11.62:0,12,252	0/0:3,0:3:0:0,0,0	0/0:8,0:8:14.96:0,15,378	0/0:4,0:4:8.98:0,9,185	0/0:6,0:6:6.02:0,6,122	1/1:1,4:5:9.03:266,9,0	1/1:4,3:7:17.99:356,18,0	1/1:7,6:13:29.66:640,30,0	0/0:35,0:35:81.28:0,81,2762	0/0:10,0:10:23.13:0,23,608	0/0:2,0:2:3.01:0,3,50	0/0:17,0:16:7.03:0,7,397	0/0:3,0:3:3.01:0,3,74	0/0:6,0:6:6.02:0,6,184	0/0:22,0:22:51.16:0,51,1603	0/0:3,0:3:0.89:0,1,2	0/0:10,0:10:21.07:0,21,562	0/0:3,0:3:9.03:0,9,275	0/0:6,0:6:3.01:0,3,61
chr10	91904451	.	TA	T	1300.13	PASS	AB=0.961;AC=14;AF=0.250;AN=56;BaseQRankSum=10.134;DP=467;FS=1.320;HRun=1;HaplotypeScore=68.6787;InbreedingCoeff=0.7273;MQ=87.42;MQ0=0;MQRankSum=-2.317;QD=9.92;ReadPosRankSum=4.929;VQSLOD=1.5693;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.14:0,48,726	0/0:6,0:6:18.06:0,18,283	0/0:16,0:16:42.10:0,42,598	0/0:21,0:20:56.71:0,57,784	0/0:8,0:8:24.06:0,24,359	0/0:13,0:13:39.13:0,39,614	0/0:25,0:25:72.18:0,72,1032	0/0:19,0:19:51.15:0,51,743	0/0:13,0:13:39.10:0,39,566	1/1:12,0:12:27.26:114,27,0	0/1:8,0:8:2.32:67,0,2	0/0:13,0:13:36.09:0,36,508	0/1:15,2:17:1.18:208,0,1	0/1:18,1:19:2.25:173,0,2	0/0:13,0:13:33.06:0,33,463	0/0:12,0:12:36.12:0,36,566	0/0:51,0:51:99:0,144,2124	1/1:25,3:28:28.35:365,28,0	0/0:16,0:16:48.01:0,48,693	0/0:6,0:6:18.05:0,18,259	0/0:46,0:46:99:0,138,2055	1/1:6,0:6:10.91:48,11,0	1/1:4,0:4:8.04:33,8,0	1/1:28,2:30:73.88:427,74,0	0/1:7,0:7:10.78:45,0,11	0/0:19,0:19:47.65:0,48,805	0/0:16,0:16:48.13:0,48,720	0/0:7,0:7:21.07:0,21,335
chr10	91904452	.	AC	A	3890.35	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=1.809;DP=464;FS=1.847;HRun=4;HaplotypeScore=58.8945;InbreedingCoeff=0.9734;MQ=86.72;MQ0=0;MQRankSum=-1.996;QD=29.70;ReadPosRankSum=3.974;VQSLOD=3.8376;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.13:0,45,597	0/0:7,0:7:18.05:0,18,237	0/0:15,0:15:39.02:0,39,498	0/0:21,0:20:53.38:0,53,694	0/0:8,0:8:21.07:0,21,294	0/0:13,0:13:39.13:0,39,546	0/0:22,0:22:63.16:0,63,802	0/0:19,0:19:45.14:0,45,615	0/0:14,0:14:36.11:0,36,487	1/1:0,12:12:36.10:421,36,0	1/1:1,7:8:18.05:213,18,0	0/0:13,0:13:36.11:0,36,487	1/1:2,13:15:45.13:530,45,0	1/1:3,16:19:45.14:539,45,0	0/0:12,0:12:30.09:0,30,403	0/0:12,0:12:36.12:0,36,503	0/0:52,0:52:99:0,141,1863	1/1:6,23:29:72.22:861,72,0	0/0:16,0:16:48.14:0,48,639	0/0:5,0:5:15.05:0,15,210	0/0:45,0:45:99:0,126,1725	1/1:0,6:6:12.04:141,12,0	1/1:0,4:4:9.03:108,9,0	1/1:2,28:30:78.24:932,78,0	1/1:2,6:8:12.04:144,12,0	0/0:19,1:20:18.17:0,18,661	0/0:16,0:16:45.15:0,45,620	0/0:7,0:7:21.07:0,21,294
chr10	91905131	.	CCCCG	C	503.79	PASS	AB=0.970;AC=11;AF=0.196;AN=56;BaseQRankSum=4.982;DP=296;FS=5.486;HRun=0;HaplotypeScore=65.9207;InbreedingCoeff=-0.0980;MQ=82.53;MQ0=1;MQRankSum=-3.570;QD=4.27;ReadPosRankSum=6.107;VQSLOD=0.5971;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:21.29:0,21,150	0/0:5,0:5:5.96:0,6,73	0/0:18,0:16:36.66:0,37,361	0/0:13,0:11:7.96:0,8,162	0/0:9,0:9:11.18:0,11,71	1/1:8,1:9:16.30:170,16,0	0/1:17,1:18:42.11:158,0,42	0/1:9,0:9:9.13:9,0,48	0/1:13,0:13:66.55:67,0,90	0/0:5,0:5:6:0,6,52	0/0:4,0:4:3:0,3,27	0/0:17,0:17:19.95:0,20,166	0/0:7,0:7:17.94:0,18,199	0/0:8,0:8:14.92:0,15,114	0/0:13,0:13:6.98:0,7,50	0/1:11,0:11:27.38:107,0,27	0/0:21,0:21:13.12:0,13,79	0/0:14,0:14:29.91:0,30,255	0/1:10,0:10:18.30:18,0,33	0/1:11,1:12:52.63:53,0,99	0/1:20,0:20:10.72:11,0,137	0/0:3,0:3:5.99:0,6,49	0/0:2,0:2:2.97:0,3,20	0/0:7,0:7:9:0,9,82	0/0:6,0:6:2.94:0,3,18	0/1:10,0:10:6.69:7,0,61	0/0:13,0:13:4.72:0,5,88	0/1:5,1:6:12.54:48,0,13
chr10	91905706	.	A	AACACACACAC	4943.58	PASS	AB=0.852;AC=48;AF=0.889;AN=54;BaseQRankSum=-2.629;DP=574;FS=7.155;HRun=0;HaplotypeScore=207.7394;InbreedingCoeff=0.1224;MQ=54.46;MQ0=10;MQRankSum=-1.116;QD=9.26;ReadPosRankSum=-2.050;VQSLOD=2.5611;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:44:6.97:7,0,77	0/1:5,0:6:4.01:41,0,4	1/1:33,0:19:1.55:4,2,0	./.	1/1:13,0:12:0.45:1,0,0	1/1:9,1:14:6.02:205,6,0	1/1:32,0:31:25.97:269,26,0	1/1:17,0:17:5.97:77,6,0	1/1:18,0:17:12.04:343,12,0	1/1:20,0:19:18.05:399,18,0	1/1:14,0:13:1.48:111,1,0	1/1:20,0:19:18.17:382,18,0	1/1:15,0:15:12.65:209,13,0	1/1:21,0:20:14.45:307,14,0	0/1:10,0:13:85.49:85,0,215	1/1:10,2:17:2.34:147,2,0	0/1:21,0:21:99:148,0,120	1/1:27,0:24:25.88:595,26,0	1/1:24,0:23:18.10:287,18,0	0/0:5,0:5:0:0,0,0	1/1:36,0:34:12.83:153,13,0	1/1:8,0:7:5.98:47,6,0	1/1:16,0:15:0.47:1,0,0	1/1:38,0:37:17.67:244,18,0	1/1:19,0:18:9.02:208,9,0	1/1:20,0:20:10.83:153,11,0	1/1:19,0:19:19.44:409,19,0	1/1:8,0:8:9:111,9,0
chr10	91906175	.	CA	C	5662.71	PASS	AB=0.725;AC=37;AF=0.661;AN=56;BaseQRankSum=-0.895;DP=476;FS=13.208;HRun=12;HaplotypeScore=70.3939;InbreedingCoeff=0.7823;MQ=65.58;MQ0=0;MQRankSum=0.323;QD=16.51;ReadPosRankSum=1.494;VQSLOD=5.0377;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:20:59.95:0,60,587	0/0:5,0:5:15.01:0,15,140	0/1:9,0:7:5.12:5,0,51	0/0:8,0:7:11.72:0,12,98	1/1:6,24:31:64.76:493,65,0	0/0:5,0:16:25.73:0,26,145	0/0:2,0:24:51.44:0,51,277	1/1:4,22:28:66.79:499,67,0	1/1:2,8:10:20.92:163,21,0	1/1:5,17:22:47.78:372,48,0	0/1:8,14:22:19.08:239,0,19	1/1:1,10:11:26.87:209,27,0	1/1:1,13:15:31.90:238,32,0	1/1:4,7:12:22.95:168,23,0	0/0:15,0:15:36.04:0,36,349	0/0:2,0:16:34.09:0,34,171	0/0:26,2:29:28.48:0,28,624	1/1:1,14:17:39.82:290,40,0	1/1:3,14:17:41.81:321,42,0	1/1:2,20:22:59.76:464,60,0	1/1:0,7:9:19.01:128,19,0	1/1:2,13:15:35.86:279,36,0	1/1:4,15:19:14.38:294,14,0	1/1:1,12:14:34.29:246,34,0	1/1:3,23:26:56.74:441,57,0	1/1:5,17:23:52.80:396,53,0	0/1:2,7:9:6.53:139,0,7	1/1:0,12:12:35.86:279,36,0
chr10	91906209	.	T	TTGTGTG	8390.93	PASS	AB=0.929;AC=36;AF=0.643;AN=56;BaseQRankSum=0.909;DP=527;FS=5.843;HRun=0;HaplotypeScore=157.5753;InbreedingCoeff=0.7064;MQ=52.56;MQ0=10;MQRankSum=-3.553;QD=22.44;ReadPosRankSum=-0.644;VQSLOD=4.2130;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:21:40.67:0,41,704	0/0:1,0:4:2.66:0,3,5	0/0:20,0:9:5.59:0,6,88	0/0:21,0:6:5.75:0,6,50	1/1:23,1:26:17.59:371,18,0	0/0:17,0:18:18.71:0,19,492	0/0:16,0:16:24.05:0,24,420	0/1:39,0:38:5.20:457,0,5	1/1:11,0:12:14.96:242,15,0	1/1:17,4:21:29.39:636,29,0	1/1:14,5:20:24.11:728,24,0	1/1:11,0:14:24.01:330,24,0	1/1:13,0:16:20.83:253,21,0	1/1:13,3:17:35.84:537,36,0	0/0:7,0:15:8.30:0,8,32	0/0:12,0:13:20.10:0,20,381	0/0:11,0:24:17:0,17,202	1/1:15,2:18:14.93:222,15,0	0/1:20,0:23:13.79:486,0,14	1/1:17,0:19:3.68:287,4,0	1/1:20,0:20:9.55:308,10,0	1/1:14,3:19:26.94:465,27,0	1/1:18,7:27:39.10:1012,39,0	1/1:15,0:16:6:124,6,0	1/1:17,6:24:39.09:873,39,0	1/1:18,1:21:17.12:793,17,0	1/1:8,0:8:6.02:166,6,0	1/1:7,0:8:6:102,6,0
chr10	91906407	.	G	GAC	7094.95	PASS	AB=0.596;AC=18;AF=0.321;AN=56;BaseQRankSum=-16.219;DP=682;FS=13.086;HRun=0;HaplotypeScore=107.0787;InbreedingCoeff=0.8295;MQ=71.55;MQ0=1;MQRankSum=-0.936;QD=30.06;ReadPosRankSum=0.369;VQSLOD=6.1440;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:86.94:0,87,1028	0/0:4,0:4:12.04:0,12,147	0/0:38,0:31:49.57:0,50,618	0/0:39,0:33:45.48:0,45,489	1/1:3,22:26:14.81:746,15,0	0/0:26,0:26:60.15:0,60,701	0/0:25,0:25:51.09:0,51,575	1/1:10,20:32:32.25:933,32,0	1/1:2,24:25:20.27:844,20,0	0/0:26,0:26:69.20:0,69,830	0/0:16,0:17:41.96:0,42,494	0/1:5,11:16:34.50:486,0,34	0/0:24,0:24:57.18:0,57,701	0/0:23,0:24:54.10:0,54,645	0/0:22,0:22:51.14:0,51,609	0/0:24,0:24:54.14:0,54,640	0/0:28,0:29:75.83:0,76,803	0/0:20,0:21:48.03:0,48,533	1/1:6,11:17:30.09:457,30,0	1/1:4,17:21:39.13:636,39,0	1/1:7,24:33:50.38:790,50,0	0/0:23,0:23:60.19:0,60,738	0/0:13,0:14:32.94:0,33,383	0/0:34,0:34:84.25:0,84,1021	0/0:11,0:11:24.05:0,24,272	0/1:8,16:24:16.56:736,0,17	1/1:2,25:27:51.07:831,51,0	1/1:1,13:14:39.13:636,39,0
chr10	91907110	.	AT	A	2318.20	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=1.015;DP=538;FS=0.000;HRun=13;HaplotypeScore=67.5663;InbreedingCoeff=0.8689;MQ=61.19;MQ0=6;MQRankSum=-0.326;QD=13.02;ReadPosRankSum=3.445;VQSLOD=3.9938;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:98.80:0,99,919	0/0:11,2:13:2.13:0,2,182	0/1:10,0:4:15.30:15,0,20	0/0:10,0:4:6:0,6,53	0/0:7,0:16:25.96:0,26,150	0/0:14,0:14:30.05:0,30,292	0/0:29,1:30:47.13:0,47,600	0/0:16,0:22:43.55:0,44,274	0/0:7,0:16:20.04:0,20,109	1/1:4,12:17:37.79:268,38,0	1/1:3,10:13:20.81:153,21,0	0/0:5,0:18:25.26:0,25,133	1/1:2,11:13:32.80:241,33,0	1/1:0,10:10:11.90:88,12,0	0/0:17,0:17:30:0,30,282	0/0:3,0:5:14.69:0,15,113	0/0:28,3:31:53.13:0,53,667	1/1:2,24:28:63.72:450,64,0	0/0:9,0:14:32.05:0,32,225	0/0:12,0:25:52.24:0,52,312	0/0:9,0:24:31.37:0,31,160	1/1:5,18:24:49.71:356,50,0	1/1:3,17:21:46.66:334,47,0	1/1:6,12:19:33.89:231,34,0	1/1:3,20:23:53.69:394,54,0	0/0:8,0:26:57.77:0,58,341	0/0:5,0:13:28.85:0,29,170	0/0:8,0:12:26.34:0,26,185
chr10	91907484	.	A	AT	4602.79	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-6.010;DP=583;FS=1.653;HRun=8;HaplotypeScore=85.1669;InbreedingCoeff=0.9307;MQ=70.72;MQ0=2;MQRankSum=3.237;QD=20.37;ReadPosRankSum=-2.058;VQSLOD=4.0366;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:99:0,102,919	0/0:9,0:9:27.01:0,27,245	0/0:25,0:13:10.31:0,10,143	0/1:27,0:16:5.52:6,0,85	1/1:5,24:29:72.15:787,72,0	0/0:17,0:17:48.03:0,48,438	0/0:23,0:23:59.96:0,60,539	1/1:8,16:24:53.44:544,53,0	1/1:5,9:14:24.06:264,24,0	0/0:28,0:28:65.91:0,66,581	0/0:12,0:12:18.78:0,19,236	1/1:3,14:16:24.05:265,24,0	0/0:14,0:14:29.92:0,30,272	0/0:17,0:17:45.01:0,45,408	0/0:25,0:25:62.97:0,63,568	0/0:20,0:20:36:0,36,326	0/0:23,0:23:60.01:0,60,540	0/0:31,0:31:45.03:0,45,599	1/1:4,18:22:54.15:604,54,0	1/1:4,18:22:54.02:560,54,0	1/1:8,2:10:18.05:201,18,0	0/0:17,0:17:42.01:0,42,384	0/0:19,0:19:48:0,48,433	0/0:13,0:13:39:0,39,349	0/0:20,0:20:51.02:0,51,463	1/1:9,19:28:38.35:638,38,0	1/1:4,15:19:33.08:370,33,0	1/1:8,6:14:34.32:364,34,0
chr10	91907493	.	CT	C	690.78	PASS	AB=0.934;AC=15;AF=0.268;AN=56;BaseQRankSum=4.151;DP=591;FS=0.434;HRun=14;HaplotypeScore=88.6841;InbreedingCoeff=0.0647;MQ=65.57;MQ0=2;MQRankSum=-0.552;QD=2.74;ReadPosRankSum=1.499;VQSLOD=0.0649;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,2:42:25.53:0,26,627	1/1:2,7:9:17.78:123,18,0	0/1:25,2:14:19.26:19,0,45	0/1:25,0:13:0.16:0,0,26	0/0:29,0:30:14.22:0,14,369	0/0:18,2:20:15.39:0,15,268	0/0:21,0:23:49.36:0,49,445	0/0:24,0:24:24.27:0,24,238	0/1:15,0:15:8.05:8,0,171	0/1:19,3:23:23.39:23,0,239	0/0:14,0:14:1.12:0,1,120	0/0:15,0:15:5.87:0,6,149	0/1:11,2:13:2.57:3,0,119	0/0:18,2:20:25.16:0,25,345	0/1:14,12:26:6.70:233,0,7	0/0:16,3:19:16.27:0,16,227	1/1:3,17:21:50.57:349,51,0	0/0:31,0:33:55.86:0,56,517	0/1:26,0:25:33.93:34,0,186	0/0:23,2:25:19.23:0,19,325	0/1:10,0:10:35.22:35,0,70	0/1:16,1:17:3.17:3,0,189	0/0:18,0:19:20.09:0,20,217	0/0:14,0:16:21.03:0,21,217	0/0:18,1:20:26.55:0,27,397	0/1:28,0:28:7.27:7,0,235	0/0:17,0:17:25.66:0,26,282	0/1:12,0:12:6.40:6,0,140
chr10	91908088	.	G	GGAAGTATCTTAAAATACGCACACACAC	1608.04	PASS	AB=0.732;AC=32;AF=0.941;AN=34;BaseQRankSum=-2.593;DP=40;FS=17.927;HRun=0;HaplotypeScore=30.7031;InbreedingCoeff=-0.2249;MQ=82.50;MQ0=0;MQRankSum=0.755;QD=45.94;ReadPosRankSum=-1.609;VQSLOD=0.0719;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,0:1:2.97:20,3,0	0/1:4,1:5:52.93:615,0,53	0/1:3,0:4:49.77:248,0,50	./.	./.	1/1:1,0:1:2.98:22,3,0	1/1:2,0:2:6.02:107,6,0	./.	1/1:3,0:3:6:140,6,0	1/1:1,0:1:3.01:50,3,0	./.	1/1:1,0:1:3:25,3,0	./.	./.	1/1:2,0:2:5.99:50,6,0	./.	1/1:1,0:1:3.01:48,3,0	./.	1/1:1,0:1:3.01:50,3,0	./.	1/1:1,0:1:3.01:63,3,0	1/1:2,0:2:5.99:48,6,0	1/1:3,0:3:6.01:69,6,0	1/1:2,0:2:3.01:59,3,0	1/1:2,0:2:3:28,3,0	1/1:1,0:1:3.01:58,3,0	./.
chr10	91991789	.	CAAA	C	3657.03	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-5.468;DP=425;FS=13.283;HRun=15;HaplotypeScore=79.0993;InbreedingCoeff=0.9805;MQ=69.58;MQ0=3;MQRankSum=-2.768;QD=23.44;ReadPosRankSum=3.515;VQSLOD=1.4840;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:19:48.09:0,48,731	0/0:2,0:11:17.69:0,18,101	0/0:18,0:7:20.89:0,21,254	0/0:18,0:13:20.77:0,21,185	1/1:1,16:20:50.06:552,50,0	0/0:11,0:13:33.11:0,33,592	0/0:11,0:13:36.10:0,36,567	1/1:6,14:20:38.95:437,39,0	1/1:2,9:11:18.05:202,18,0	0/0:3,0:20:50.35:0,50,408	0/0:5,0:18:40.38:0,40,288	1/1:4,5:9:14.97:168,15,0	0/0:3,0:13:28.15:0,28,239	0/0:5,0:11:25.16:0,25,191	0/0:2,0:11:11.71:0,12,42	0/0:11,0:11:21.07:0,21,369	0/0:2,0:17:17.58:0,18,56	0/0:4,0:13:32.38:0,32,258	1/1:3,17:20:51.10:571,51,0	1/1:3,14:18:38.87:421,39,0	1/1:3,7:10:17.96:202,18,0	0/0:4,0:15:30.68:0,31,278	0/0:3,0:12:19.66:0,20,145	0/0:6,0:21:40.11:0,40,302	0/0:4,0:13:29.91:0,30,261	1/1:7,10:18:13.06:336,13,0	1/1:3,7:11:26.67:264,27,0	1/1:3,16:19:45.06:505,45,0
chr10	91992027	.	G	GT	5584.15	PASS	AB=0.583;AC=19;AF=0.339;AN=56;BaseQRankSum=-9.535;DP=490;FS=1.702;HRun=7;HaplotypeScore=64.2934;InbreedingCoeff=0.9177;MQ=61.94;MQ0=0;MQRankSum=-1.801;QD=28.64;ReadPosRankSum=-0.488;VQSLOD=5.3017;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:57.08:0,57,550	0/0:7,0:7:18.03:0,18,174	0/0:10,0:9:9.75:0,10,132	0/0:13,0:13:23.80:0,24,213	1/1:2,16:18:48.15:579,48,0	0/0:19,0:19:48.08:0,48,463	0/0:19,0:19:54.04:0,54,507	1/1:5,17:22:48.58:557,49,0	1/1:1,15:16:19.17:514,19,0	0/0:22,0:22:60.05:0,60,567	0/0:16,0:16:48.08:0,48,463	1/1:1,16:17:48.06:560,48,0	0/0:15,0:15:42.04:0,42,394	0/0:13,0:13:33.05:0,33,319	0/0:17,0:17:48.08:0,48,463	0/0:17,0:17:39.05:0,39,376	0/0:24,0:24:57.06:0,57,542	0/0:11,0:11:27.04:0,27,258	1/1:0,18:18:54.11:607,54,0	1/1:2,24:26:60.18:721,60,0	1/1:5,14:19:30.09:362,30,0	0/0:11,0:11:27.02:0,27,251	0/0:17,0:17:48.07:0,48,462	0/0:21,0:21:51.08:0,51,492	0/0:16,0:16:45.07:0,45,433	0/1:6,15:21:9.80:459,0,10	1/1:3,20:23:57.17:680,57,0	1/1:0,15:15:45.14:543,45,0
chr10	91992187	.	T	TG	4353.28	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-9.157;DP=679;FS=5.113;HRun=7;HaplotypeScore=75.2519;InbreedingCoeff=0.9924;MQ=62.95;MQ0=0;MQRankSum=-0.393;QD=29.02;ReadPosRankSum=1.366;VQSLOD=5.4974;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,129,1245	1/1:1,8:9:21.51:240,22,0	0/0:34,0:34:92.44:0,92,834	0/0:22,0:22:46.96:0,47,424	0/0:24,0:24:54.08:0,54,521	1/1:3,17:20:51.11:596,51,0	1/1:2,22:24:63.19:761,63,0	0/0:26,0:26:69.10:0,69,662	0/0:22,0:22:54.08:0,54,521	0/0:28,0:28:72.11:0,72,695	0/0:20,0:20:39.06:0,39,376	0/0:27,0:27:78.11:0,78,747	0/0:21,0:21:30.37:0,30,468	0/0:25,0:25:60.05:0,60,571	1/1:2,31:33:87.25:1036,87,0	1/1:2,20:22:48.15:580,48,0	1/1:8,34:42:25.65:1140,26,0	0/0:20,0:20:60.05:0,60,570	0/0:21,0:21:54.09:0,54,521	0/0:22,0:22:60.09:0,60,578	0/0:31,0:32:95.19:0,95,904	0/0:15,0:15:33.04:0,33,319	0/0:19,0:19:30.04:0,30,290	0/0:26,0:26:69.11:0,69,666	0/0:16,0:16:45.07:0,45,434	0/0:21,0:21:51.08:0,51,492	0/0:30,0:30:87.14:0,87,839	0/0:9,0:9:12.02:0,12,116
chr10	91995675	.	CACACAG	C	73.44	PASS	AB=0.983;AC=11;AF=0.324;AN=34;BaseQRankSum=0.918;DP=654;FS=14.920;HRun=0;HaplotypeScore=76.8790;InbreedingCoeff=-0.0060;MQ=23.25;MQ0=132;MQRankSum=-1.767;QD=0.28;ReadPosRankSum=-3.301;VQSLOD=-0.2178;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:40:31.77:0,32,576	./.	0/0:5,0:1:2.96:0,3,19	0/1:15,0:2:0.42:0,0,13	./.	./.	./.	0/0:26,0:4:6.02:0,6,125	0/0:66,0:32:19.15:0,19,186	0/0:3,0:4:8.80:0,9,89	./.	0/1:74,0:42:45.05:45,0,73	0/0:1,0:1:0.47:0,0,1	./.	1/1:22,0:13:1.25:4,1,0	./.	0/1:26,4:20:40.83:41,0,109	0/0:4,0:4:8.08:0,8,43	0/1:41,0:16:9.87:10,0,244	0/1:10,0:8:0.10:0,0,0	0/0:184,1:98:17.80:0,18,751	./.	./.	./.	./.	0/1:32,0:10:5.10:5,0,38	1/1:28,1:13:0.97:57,1,0	0/1:8,0:7:12.45:12,0,37
chr10	91995703	.	G	GAC	322.04	PASS	AB=0.978;AC=11;AF=0.344;AN=32;BaseQRankSum=3.597;DP=820;DS;FS=15.497;HRun=0;HaplotypeScore=107.5285;InbreedingCoeff=-0.0647;MQ=24.59;MQ0=165;MQRankSum=-0.390;QD=0.51;ReadPosRankSum=-2.314;VQSLOD=0.2681;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:33:25.63:0,26,302	./.	0/0:10,0:2:5.81:0,6,51	0/0:21,0:2:1.62:0,2,11	0/1:37,1:28:0:0,0,0	./.	./.	0/0:67,0:21:41.97:0,42,497	0/1:79,1:47:27.62:44,0,28	0/0:5,0:5:5.98:0,6,54	./.	0/1:88,2:57:21.87:22,0,196	./.	./.	0/0:11,0:6:0:0,0,0	./.	1/1:22,1:18:5.23:13,5,0	./.	0/1:48,1:16:28.65:29,0,136	1/1:17,1:14:3.01:37,3,0	0/1:235,12:145:99:155,0,548	./.	./.	./.	./.	0/1:43,0:17:17.13:17,0,140	0/1:39,1:21:99:115,0,112	0/0:14,0:12:11.50:0,11,91
chr10	91995718	.	A	ACT	520.29	PASS	AB=0.984;AC=11;AF=0.306;AN=36;BaseQRankSum=4.844;DP=888;DS;FS=8.179;HRun=0;HaplotypeScore=112.8293;InbreedingCoeff=-0.2259;MQ=24.10;MQ0=204;MQRankSum=3.303;QD=0.80;ReadPosRankSum=1.701;VQSLOD=1.4139;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:37:35.97:0,36,459	./.	0/0:15,0:1:2.96:0,3,19	0/0:29,0:2:4.19:0,4,21	0/1:40,0:31:0.06:0,0,0	./.	./.	0/0:102,0:28:63.14:0,63,853	1/1:75,1:44:3.26:80,3,0	0/0:4,0:3:3.01:0,3,45	./.	0/1:87,0:50:63.32:63,0,199	./.	0/0:3,0:2:0:0,0,0	0/0:21,0:13:3.45:0,3,25	./.	0/1:22,0:18:12.33:29,0,12	0/0:3,0:2:0:0,0,0	0/1:46,0:16:21.29:21,0,223	0/1:25,1:17:73.82:79,0,74	0/1:246,3:127:99:116,0,844	./.	./.	./.	./.	0/1:50,1:17:63.60:64,0,196	0/1:38,1:23:99:164,0,208	0/1:13,0:10:13.38:13,0,151
chr10	91995838	.	A	ACT	242.10	PASS	AB=0.977;AC=9;AF=0.281;AN=32;BaseQRankSum=-1.750;DP=1100;DS;FS=0.000;HRun=0;HaplotypeScore=133.2061;InbreedingCoeff=-0.2152;MQ=23.66;MQ0=290;MQRankSum=0.013;QD=0.40;ReadPosRankSum=-0.823;VQSLOD=2.2314;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:20:8.99:0,9,90	0/0:27,0:11:7.73:0,8,126	./.	./.	0/0:52,2:40:2.34:0,2,15	./.	1/1:9,0:8:0.47:1,0,0	0/0:110,0:11:27.29:0,27,312	0/1:81,3:46:22.04:22,0,287	./.	./.	0/0:103,2:58:22.06:0,22,345	./.	./.	0/1:74,0:49:6.63:7,0,108	./.	0/0:78,0:57:10.81:0,11,504	0/0:2,0:2:0:0,0,0	0/1:54,0:18:13.75:14,0,300	0/0:45,0:22:24.08:0,24,364	0/1:232,5:123:99:105,0,704	./.	./.	./.	./.	0/1:80,0:39:86.54:87,0,604	0/1:36,3:23:81.21:81,0,211	0/1:30,1:21:30.83:31,0,284
chr10	91996619	.	G	GATTTACACTCT	12703.37	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-3.861;DP=641;FS=28.451;HRun=0;HaplotypeScore=189.1504;InbreedingCoeff=0.9989;MQ=77.08;MQ0=0;MQRankSum=-14.364;QD=138.08;ReadPosRankSum=-1.479;VQSLOD=3.6343;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,4242	1/1:1,5:7:21.07:1135,21,0	0/0:22,0:22:63.22:0,63,2033	0/0:16,0:16:45.11:0,45,1165	0/0:26,0:26:72.25:0,72,2570	1/1:5,13:19:54.14:2875,54,0	1/1:5,12:19:51.13:2635,51,0	0/0:34,0:34:90.31:0,90,3056	0/0:32,0:32:84.43:0,84,3161	0/0:25,0:25:72.25:0,72,2555	0/0:17,0:17:51.18:0,51,1801	0/0:23,0:23:66.23:0,66,2299	0/0:24,0:24:69.22:0,69,2251	0/0:16,0:16:48.16:0,48,1675	1/1:9,8:17:48.09:2333,48,0	1/1:10,6:18:48.09:2191,48,0	1/1:6,5:12:27.09:1536,27,0	0/0:21,0:21:57.20:0,57,2022	0/0:26,0:26:78.26:0,78,2490	0/0:29,0:29:87.30:0,87,2996	0/0:33,0:33:93.32:0,93,3267	0/0:24,0:24:72.25:0,72,2529	0/0:17,0:17:51.15:0,51,1604	0/0:26,0:26:78.27:0,78,2666	0/0:11,0:10:30.10:0,30,1071	0/0:29,0:29:87.30:0,87,3046	0/0:35,0:35:99:0,102,3566	0/0:18,0:17:51.16:0,51,1738
chr10	91996751	.	CCT	C	1995.26	PASS	AB=0.956;AC=26;AF=0.464;AN=56;BaseQRankSum=3.268;DP=621;FS=0.364;HRun=0;HaplotypeScore=172.5681;InbreedingCoeff=-0.1354;MQ=53.56;MQ0=20;MQRankSum=6.114;QD=4.21;ReadPosRankSum=2.330;VQSLOD=2.6273;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:97.18:0,97,1570	0/0:13,0:13:16.24:0,16,131	0/0:11,0:7:9.03:0,9,124	0/0:14,0:8:15.03:0,15,179	0/1:30,0:30:17.16:17,0,317	0/1:21,0:21:37.93:38,0,145	0/0:10,0:10:1.53:0,2,17	0/0:36,0:35:68.05:0,68,758	0/1:23,0:23:25.95:26,0,156	0/1:12,11:21:31.21:311,0,31	1/1:9,12:16:23.02:386,23,0	0/1:20,0:20:58.78:59,0,138	1/1:21,0:21:2.45:71,2,0	0/1:13,1:13:1.93:98,0,2	0/1:21,0:19:12.98:13,0,40	0/0:18,0:17:16.44:0,16,103	0/1:24,1:24:56:56,0,59	1/1:20,0:19:14.17:154,14,0	0/1:23,0:22:5.94:6,0,337	0/1:23,0:23:49.31:49,0,137	0/1:20,0:20:5.20:5,0,224	1/1:26,0:24:18.38:292,18,0	0/1:25,1:25:10.91:223,0,11	1/1:22,1:17:14.35:118,14,0	0/1:16,4:17:13.73:135,0,14	0/1:25,1:26:51.47:51,0,146	0/1:27,1:28:51.68:52,0,156	0/1:20,0:20:5.28:5,0,239
chr10	91996762	.	C	CTT	8117.51	PASS	AB=0.814;AC=27;AF=0.482;AN=56;BaseQRankSum=-4.833;DP=631;FS=3.945;HRun=1;HaplotypeScore=165.7141;InbreedingCoeff=0.7862;MQ=51.41;MQ0=22;MQRankSum=-3.036;QD=25.05;ReadPosRankSum=-1.532;VQSLOD=3.1894;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,106,1538	0/1:9,3:12:42.15:147,0,42	0/0:8,0:4:8.90:0,9,124	0/0:11,0:5:15.03:0,15,179	0/0:30,0:30:77.74:0,78,786	0/1:14,8:22:13.87:527,0,14	0/1:9,1:10:1.18:203,0,1	0/0:32,0:30:68.22:0,68,877	0/0:22,0:22:59.73:0,60,563	1/1:19,7:24:68.97:952,69,0	1/1:15,8:18:54.15:728,54,0	0/0:18,0:18:6.34:0,6,407	1/1:0,23:24:21.07:357,21,0	1/1:3,14:17:24.08:417,24,0	1/1:18,8:24:34.10:732,34,0	1/1:13,7:19:13.55:540,14,0	1/1:19,9:26:25.47:788,25,0	1/1:2,19:20:13.65:349,14,0	0/0:24,0:23:29.10:0,29,508	0/0:27,0:27:71.93:0,72,712	0/0:19,0:19:47.98:0,48,526	1/1:0,23:21:44.98:607,45,0	1/1:3,26:28:53:757,53,0	1/1:3,20:17:18.05:289,18,0	1/1:7,12:16:48.11:725,48,0	0/0:25,0:25:17.63:0,18,671	0/0:30,0:29:89.49:0,89,786	0/0:19,0:19:48.36:0,48,458
chr10	91996768	.	CTT	C	2797	PASS	AB=0.770;AC=11;AF=0.196;AN=56;BaseQRankSum=-3.327;DP=620;FS=4.899;HRun=3;HaplotypeScore=178.6883;InbreedingCoeff=0.0459;MQ=50.74;MQ0=19;MQRankSum=6.638;QD=12.60;ReadPosRankSum=3.567;VQSLOD=0.8486;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:42:99:0,117,2040	0/0:13,0:13:39.11:0,39,620	0/0:4,0:1:0:0,0,0	0/1:7,0:3:14.17:14,0,37	0/1:19,9:28:90.95:360,0,91	0/0:22,0:22:66.17:0,66,1094	0/0:11,0:11:33.05:0,33,518	0/0:30,0:28:7.97:0,8,281	0/1:13,9:22:28.58:325,0,29	0/0:25,0:23:66.23:0,66,1167	0/0:23,0:18:53.82:0,54,697	0/1:9,8:17:40.23:241,0,40	0/0:25,0:25:24.07:0,24,361	0/0:18,0:17:33.08:0,33,531	0/0:25,0:23:69.23:0,69,1230	0/0:20,0:19:57.15:0,57,966	0/0:30,0:28:84.12:0,84,1370	0/0:21,0:20:27:0,27,335	0/1:20,3:22:99:164,0,135	1/1:19,9:28:5.78:467,6,0	0/1:18,3:21:60.18:191,0,60	0/0:20,0:18:41.86:0,42,508	0/0:25,0:24:52.21:0,52,680	0/0:24,0:18:21.16:0,21,241	0/0:19,0:16:48.12:0,48,793	0/1:15,10:25:35.41:428,0,35	0/1:20,12:32:0.54:543,0,1	0/1:5,12:17:65.62:210,0,66
chr10	91996789	.	T	TTTCC	5938.76	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=-2.338;DP=640;FS=0.000;HRun=0;HaplotypeScore=195.4975;InbreedingCoeff=0.8313;MQ=51.87;MQ0=12;MQRankSum=-5.649;QD=25.27;ReadPosRankSum=1.422;VQSLOD=4.3465;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:86.26:0,86,1184	0/1:13,0:13:27.99:28,0,66	0/0:17,0:8:7.56:0,8,103	0/0:24,0:8:21.03:0,21,207	0/0:26,0:26:69.12:0,69,723	0/0:22,0:22:28.16:0,28,201	0/0:13,0:13:22.71:0,23,167	0/0:18,0:16:20.86:0,21,173	0/0:25,0:25:52.86:0,53,696	1/1:23,5:28:67.79:1061,68,0	1/1:13,6:17:45.11:706,45,0	0/0:15,0:15:36.27:0,36,337	1/1:20,5:25:40.30:590,40,0	1/1:14,5:19:35.07:502,35,0	0/0:24,0:22:23.15:0,23,122	0/1:19,0:18:18.61:19,0,80	0/0:37,0:34:21.45:0,21,314	1/1:19,3:21:30.33:359,30,0	0/0:23,0:21:46.78:0,47,416	0/0:29,0:29:62.78:0,63,691	0/0:21,0:21:47.14:0,47,446	1/1:13,5:18:36:535,36,0	1/1:16,7:23:49.89:795,50,0	1/1:17,3:17:23.89:279,24,0	1/1:19,10:26:69.13:1066,69,0	0/0:27,0:27:38.01:0,38,531	0/0:31,0:30:76.19:0,76,905	0/0:16,0:15:26.68:0,27,211
chr10	91997471	.	CT	C	1572.47	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.831;DP=662;FS=25.133;HRun=4;HaplotypeScore=85.2292;InbreedingCoeff=0.8995;MQ=59.71;MQ0=1;MQRankSum=-0.584;QD=29.12;ReadPosRankSum=-0.272;VQSLOD=1.7080;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.24:0,72,1008	0/0:11,0:11:24.08:0,24,335	0/0:21,0:18:33.27:0,33,602	0/0:22,0:20:57.13:0,57,743	0/0:33,0:33:81.25:0,81,1104	1/1:0,17:17:51.16:611,51,0	1/1:1,20:21:59.98:665,60,0	0/0:29,0:29:84.26:0,84,1145	0/0:31,0:31:87.25:0,87,1190	0/0:38,0:38:99:0,114,1568	0/0:25,0:25:69.22:0,69,947	0/0:20,0:20:54.17:0,54,738	0/0:13,0:13:39.13:0,39,546	0/0:23,0:23:63.20:0,63,864	0/0:21,0:21:57.19:0,57,798	1/1:2,14:16:0.11:426,0,0	0/0:31,0:31:87.22:0,87,1149	0/0:24,0:24:72.24:0,72,1008	0/0:12,0:11:30.10:0,30,420	0/0:23,0:23:60.16:0,60,817	0/0:33,0:33:96.29:0,96,1319	0/0:26,0:26:75.24:0,75,1026	0/0:26,0:26:72.24:0,72,1008	0/0:32,0:32:84.27:0,84,1160	0/0:27,0:27:75.24:0,75,1036	0/0:28,0:28:84.27:0,84,1162	0/0:16,0:16:36.08:0,36,482	0/0:16,0:16:45.15:0,45,626
chr10	91997524	.	AGTGTGTGTGTGTGT	A	5026.67	PASS	AB=0.803;AC=24;AF=0.429;AN=56;BaseQRankSum=4.405;DP=650;FS=19.591;HRun=0;HaplotypeScore=259.1867;InbreedingCoeff=0.7087;MQ=61.73;MQ0=11;MQRankSum=-5.429;QD=19.71;ReadPosRankSum=0.515;VQSLOD=2.2564;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:37:51.61:0,52,2551	0/0:0,0:7:9.03:0,9,186	0/0:33,0:15:9.03:0,9,267	0/0:32,0:16:9.48:0,9,76	1/1:15,13:28:2.91:98,3,0	1/1:12,0:11:9.03:275,9,0	1/1:14,0:13:3.01:97,3,0	1/1:24,0:23:12.01:182,12,0	1/1:12,12:24:21.07:802,21,0	0/0:44,0:47:96.32:0,96,4678	0/0:13,0:15:21.06:0,21,1018	1/1:11,5:18:8.99:236,9,0	0/0:5,0:13:21.07:0,21,1172	0/0:24,0:29:60.68:0,61,3250	0/0:5,0:15:21.01:0,21,332	1/1:7,0:7:3.48:98,3,0	0/0:17,0:23:33.11:0,33,660	0/0:18,0:24:40.34:0,40,1993	1/1:16,0:18:6.02:196,6,0	1/1:9,14:24:33.11:1274,33,0	0/1:34,5:39:7.41:131,0,7	0/0:16,0:31:45.01:0,45,2567	0/0:20,0:21:42.14:0,42,2469	0/0:23,0:41:65.52:0,66,3957	0/0:15,0:25:30.09:0,30,1623	0/1:14,9:23:99:810,0,159	1/1:4,10:14:15.05:593,15,0	1/1:4,5:9:5.05:236,5,0
chr10	91997544	.	TGTGTGTGTGTGTGTGTGTGC	T	1127.68	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=9.678;DP=620;FS=0.000;HRun=0;HaplotypeScore=308.8986;InbreedingCoeff=0.2669;MQ=49.06;MQ0=15;MQRankSum=-8.059;QD=6.59;ReadPosRankSum=5.488;VQSLOD=1.6969;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:84.27:0,84,5443	0/0:13,0:13:27.09:0,27,1197	0/0:19,0:5:14.75:0,15,305	0/0:28,0:9:20.87:0,21,360	1/1:26,0:25:3.01:76,3,0	1/1:8,4:11:8.39:493,8,0	1/1:5,9:13:3.01:170,3,0	0/0:18,0:17:37.28:0,37,758	0/1:22,0:22:27.83:28,0,330	0/0:47,0:46:99:0,138,7919	0/0:12,0:11:28.32:0,28,1683	0/1:17,0:17:38.05:38,0,311	0/0:17,0:17:42.13:0,42,2892	0/0:28,0:28:69.71:0,70,4777	0/0:16,0:16:30.10:0,30,1282	1/1:5,1:6:11.79:253,12,0	0/0:29,0:29:59.91:0,60,2432	0/0:21,0:21:56.22:0,56,3810	0/1:11,0:11:66.27:66,0,390	0/1:25,0:25:66.90:121,0,67	0/0:35,0:35:22.82:0,23,253	0/0:30,0:30:53.84:0,54,3983	0/0:20,0:20:54.19:0,54,3980	0/0:49,0:49:99:0,102,7620	0/0:25,0:25:48.62:0,49,2931	0/1:15,0:15:8.94:9,0,527	0/1:16,0:16:27.72:28,0,180	0/1:7,0:6:9.74:10,0,28
chr10	91997645	.	G	GTGTC	3547.81	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.066;DP=1034;FS=6.274;HRun=0;HaplotypeScore=220.2139;InbreedingCoeff=0.9263;MQ=57.60;MQ0=3;MQRankSum=-4.138;QD=55.43;ReadPosRankSum=0.741;VQSLOD=3.9858;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:99:0,112,1983	0/0:11,0:11:33.08:0,33,561	0/0:56,0:37:72.58:0,73,1408	0/0:41,0:35:80.82:0,81,1272	0/0:27,0:27:69.15:0,69,1106	1/1:2,15:17:45.15:1186,45,0	1/1:2,20:24:36.12:964,36,0	0/0:52,0:51:99:0,110,1803	0/0:52,0:52:99:0,141,2607	0/0:43,0:43:99:0,126,2236	0/0:19,0:20:54.14:0,54,908	0/0:36,0:37:96.33:0,96,1766	0/0:34,0:34:99:0,102,1867	0/0:39,0:39:99:0,114,2084	0/0:43,0:43:99:0,117,2105	1/1:3,20:23:2.27:1397,2,0	0/0:45,0:46:99:0,120,2103	0/0:31,0:29:87.23:0,87,1507	0/0:20,0:20:57.08:0,57,892	0/0:33,0:33:90.31:0,90,1685	0/0:118,0:118:99:0,249,4353	0/0:32,0:32:90.28:0,90,1626	0/0:25,0:25:69.17:0,69,1170	0/0:55,0:54:99:0,147,2651	0/0:27,0:27:81.24:0,81,1441	0/0:47,0:47:99:0,132,2353	0/0:23,0:23:57.19:0,57,1078	0/0:14,0:14:36.12:0,36,683
chr10	91997726	.	G	GTGTCTGTGTA	16711.61	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=7.584;DP=1093;FS=7.659;HRun=0;HaplotypeScore=327.5700;InbreedingCoeff=0.7913;MQ=52.24;MQ0=22;MQRankSum=-7.946;QD=31.18;ReadPosRankSum=-5.871;VQSLOD=2.4893;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:65:99:0,144,4199	0/1:8,0:8:8.92:136,0,9	0/0:81,0:33:84.21:0,84,1485	0/0:78,0:32:32.63:0,33,819	1/1:14,10:23:6:96,6,0	1/1:27,0:27:12.79:215,13,0	1/1:26,0:26:12.14:185,12,0	1/1:71,0:67:99:2803,134,0	1/1:31,14:46:60.01:1758,60,0	0/0:49,0:49:99:0,141,4056	0/0:22,0:22:60.17:0,60,1656	1/1:27,23:50:54.11:1801,54,0	0/0:36,0:36:99:0,102,2924	0/0:42,0:42:99:0,117,3283	0/1:47,0:47:56.34:195,0,56	1/1:22,0:22:21.46:669,21,0	0/1:13,0:13:3.86:200,0,4	0/0:27,0:27:55.76:0,56,1595	1/1:17,5:23:50.93:1772,51,0	1/1:23,10:33:26.99:672,27,0	1/1:65,6:69:25.45:404,25,0	0/0:29,0:29:84.27:0,84,2596	0/0:34,0:34:87.18:0,87,2428	0/0:55,0:54:99:0,139,4171	0/0:30,0:30:66.57:0,67,2023	1/1:29,10:39:78.28:3414,78,0	1/1:12,9:21:30.01:1174,30,0	1/1:9,5:14:39.03:1215,39,0
chr10	91997754	.	GTC	G	8148.60	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=14.963;DP=1120;FS=0.947;HRun=0;HaplotypeScore=216.2078;InbreedingCoeff=0.8445;MQ=54.23;MQ0=23;MQRankSum=-2.554;QD=14.90;ReadPosRankSum=-3.376;VQSLOD=4.2054;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:64:99:0,147,2427	1/1:1,9:10:8.96:116,9,0	0/0:80,0:37:49.46:0,49,1159	0/0:67,0:29:48.68:0,49,620	1/1:3,24:25:11.94:171,12,0	0/0:31,0:31:23.42:0,23,360	0/1:30,0:30:56.74:57,0,411	1/1:16,42:57:79.06:1126,79,0	1/1:2,49:49:57.11:800,57,0	0/0:47,0:47:99:0,135,2291	0/0:25,0:25:72.19:0,72,1174	1/1:8,40:48:49.40:612,49,0	0/0:36,0:36:99:0,102,1731	0/0:47,0:47:99:0,126,2109	1/1:7,33:38:42.14:600,42,0	0/1:42,0:42:14.67:15,0,480	1/1:2,13:15:15.05:214,15,0	0/0:29,0:29:82.89:0,83,1268	1/1:6,20:24:56.74:757,57,0	1/1:3,31:34:36.12:514,36,0	1/1:22,56:75:53.38:771,53,0	0/0:33,0:33:96.25:0,96,1625	0/0:29,0:29:66.16:0,66,1220	0/0:54,0:53:99:0,141,2518	0/0:29,0:30:79.12:0,79,1467	1/1:6,45:50:99:1549,130,0	1/1:0,24:24:27.07:384,27,0	1/1:3,10:13:37.72:464,38,0
chr10	91998259	.	AT	A	9050.08	PASS	AB=0.665;AC=43;AF=0.768;AN=56;BaseQRankSum=8.969;DP=586;FS=4.333;HRun=11;HaplotypeScore=61.0143;InbreedingCoeff=0.6955;MQ=72.64;MQ0=0;MQRankSum=-1.757;QD=18.82;ReadPosRankSum=0.162;VQSLOD=5.9687;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.17:0,81,852	0/0:11,0:11:27.07:0,27,288	0/0:15,0:15:29.56:0,30,297	0/1:11,2:13:19.39:19,0,195	1/1:5,28:33:83.89:690,84,0	1/1:3,14:17:9.97:288,10,0	1/1:5,19:25:54.79:429,55,0	1/1:5,18:23:50.91:419,51,0	1/1:1,16:17:44.95:370,45,0	1/1:4,25:29:74.83:605,75,0	1/1:5,14:20:37.96:301,38,0	1/1:2,16:18:44.92:369,45,0	1/1:3,16:19:44.90:369,45,0	1/1:2,16:18:47.94:394,48,0	0/0:23,2:25:19.88:0,20,622	1/1:4,15:19:44.94:370,45,0	0/0:24,0:24:63.16:0,63,672	1/1:0,11:11:26.97:222,27,0	0/1:6,13:21:15.53:282,0,16	1/1:4,35:40:99:819,101,0	1/1:1,26:27:56.71:616,57,0	0/1:3,15:18:15.73:297,0,16	1/1:5,22:27:59.62:492,60,0	1/1:2,19:21:53.93:443,54,0	1/1:4,11:15:32.94:270,33,0	1/1:4,15:19:47.94:394,48,0	1/1:5,18:23:47.93:394,48,0	1/1:0,8:8:23.97:197,24,0
chr10	92000755	.	C	CA	495.88	PASS	AB=0.967;AC=23;AF=0.411;AN=56;BaseQRankSum=-1.971;DP=393;FS=5.238;HRun=14;HaplotypeScore=75.5636;InbreedingCoeff=0.3784;MQ=53.94;MQ0=19;MQRankSum=3.024;QD=2.32;ReadPosRankSum=-0.865;VQSLOD=-0.4418;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:30:17.06:0,17,231	0/1:6,0:6:0.24:0,0,0	0/0:31,0:4:1.44:0,1,10	0/1:46,0:14:7.83:8,0,25	0/0:18,0:18:21.68:0,22,125	0/1:19,0:19:0.24:0,0,13	1/1:7,1:8:3.10:46,3,0	0/0:16,0:15:8.74:0,9,62	0/0:4,0:5:3.17:0,3,34	0/1:13,0:13:0:0,0,0	1/1:10,13:23:1.81:152,2,0	0/0:6,0:6:2.20:0,2,7	1/1:6,0:5:8.69:54,9,0	1/1:4,2:5:3:26,3,0	0/0:6,0:6:2.47:0,2,9	0/1:7,0:7:15.17:27,0,15	0/1:23,0:21:0.20:3,0,0	1/1:10,5:13:11.97:99,12,0	0/0:15,0:13:13.87:0,14,88	0/0:13,0:13:9.89:0,10,50	0/0:4,1:5:5.85:0,6,38	1/1:5,0:5:2.99:23,3,0	0/1:6,3:10:29.14:39,0,29	1/1:11,2:13:19.77:149,20,0	1/1:5,6:11:2.17:25,2,0	0/0:13,0:13:20.08:0,20,99	0/0:8,0:8:7.12:0,7,25	0/0:10,0:10:14.20:0,14,62
chr10	92000759	.	AAAAAAAAAAAG	A	1441.05	PASS	AB=0.971;AC=16;AF=0.286;AN=56;BaseQRankSum=6.990;DP=404;FS=30.439;HRun=0;HaplotypeScore=108.1527;InbreedingCoeff=0.0197;MQ=52.90;MQ0=24;MQRankSum=-3.088;QD=10.52;ReadPosRankSum=5.037;VQSLOD=0.0045;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:75.25:0,75,3094	0/0:5,0:5:2.25:0,2,128	0/0:40,0:4:8.94:0,9,182	0/0:53,0:13:21.21:0,21,281	0/1:14,0:14:79.59:145,0,80	1/1:21,0:21:24.54:300,25,0	1/1:7,0:7:3.28:60,3,0	0/1:15,0:13:15.39:15,0,52	0/1:5,0:5:17.73:86,0,18	0/0:16,0:15:39.10:0,39,1388	0/0:25,0:23:47.69:0,48,1346	1/1:6,0:6:2.97:56,3,0	0/0:6,0:5:12.51:0,13,477	0/0:6,0:5:6.02:0,6,277	0/0:5,0:5:11.66:0,12,265	0/1:6,0:6:32.70:78,0,33	0/0:27,0:25:30.57:0,31,883	0/0:16,0:14:24.03:0,24,979	0/1:16,0:15:63.73:93,0,64	0/1:11,1:12:64.85:146,0,65	0/1:5,0:5:1.26:1,0,38	0/0:4,0:4:9.03:0,9,390	0/0:10,0:10:21.05:0,21,741	0/0:13,0:13:30.98:0,31,1282	0/0:12,0:12:14.88:0,15,575	0/1:13,0:13:99:210,0,135	0/1:6,0:6:25.68:99,0,26	0/1:8,3:10:37.57:312,0,38
chr10	92000760	.	AAAAAAAAAAG	A	2127.66	PASS	AB=0.857;AC=25;AF=0.446;AN=56;BaseQRankSum=4.830;DP=395;FS=28.763;HRun=0;HaplotypeScore=97.7658;InbreedingCoeff=0.7249;MQ=54.04;MQ0=26;MQRankSum=-3.861;QD=16.37;ReadPosRankSum=4.708;VQSLOD=0.1761;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:75.24:0,75,2733	0/0:6,0:6:5.22:0,5,133	0/0:43,0:5:11.82:0,12,189	0/0:53,0:13:17.40:0,17,232	1/1:11,2:13:14.96:205,15,0	1/1:20,0:20:27.05:434,27,0	1/1:7,0:7:6.02:93,6,0	1/1:13,0:11:5.97:86,6,0	1/1:5,0:5:6.02:102,6,0	0/0:17,0:16:36.12:0,36,1300	0/0:23,0:21:33.11:0,33,1145	1/1:1,5:6:3.01:83,3,0	0/0:7,0:6:15.05:0,15,496	0/0:5,0:4:6.02:0,6,249	0/0:5,0:5:12.03:0,12,237	1/1:6,0:6:6.01:133,6,0	0/0:24,0:22:30.09:0,30,784	0/0:16,0:14:21.07:0,21,867	1/1:10,6:14:20.98:191,21,0	1/1:10,0:10:6.02:135,6,0	1/1:5,0:5:2.97:38,3,0	0/0:4,0:4:9.03:0,9,361	0/0:9,0:9:18.06:0,18,648	0/0:12,0:12:30.98:0,31,1151	0/0:11,0:11:12.04:0,12,496	0/1:10,2:12:85.72:365,0,86	1/1:4,2:6:6.02:167,6,0	1/1:10,1:10:12.04:296,12,0
chr10	92000761	.	AAAAAAAAAG	A	2030.92	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=5.195;DP=400;FS=29.395;HRun=0;HaplotypeScore=91.5943;InbreedingCoeff=-0.0009;MQ=53.40;MQ0=26;MQRankSum=-2.312;QD=12.02;ReadPosRankSum=4.710;VQSLOD=0.2271;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:78.18:0,78,2583	0/0:6,0:6:3.74:0,4,101	0/0:46,0:5:11.99:0,12,180	0/0:57,0:13:20.02:0,20,239	0/1:12,0:12:52.70:132,0,53	1/1:2,18:20:27.05:644,27,0	1/1:6,1:7:9.02:170,9,0	0/1:13,0:11:10.21:38,0,10	0/1:5,0:5:9.91:68,0,10	0/0:16,0:15:36.02:0,36,1163	0/1:23,0:21:25.68:26,0,941	1/1:7,0:7:3.01:64,3,0	0/1:7,0:6:0.86:1,0,421	0/0:5,0:4:9.03:0,9,278	0/0:6,0:6:12.51:0,13,209	0/1:6,0:6:4.23:167,0,4	0/0:24,0:22:28.19:0,28,670	0/0:16,0:14:21.05:0,21,765	0/1:15,0:13:32.43:140,0,32	0/1:9,0:9:26.34:111,0,26	0/1:5,0:5:12.55:13,0,13	0/0:4,0:4:9.03:0,9,333	0/0:9,0:9:20.99:0,21,597	0/0:12,0:12:30.47:0,30,1010	0/1:11,0:11:11.32:11,0,436	0/1:12,0:12:89.88:249,0,90	0/1:6,0:6:3.39:120,0,3	0/1:11,0:10:20.32:241,0,20
chr10	92000769	.	AG	A	1964.22	PASS	AB=0.981;AC=28;AF=0.500;AN=56;BaseQRankSum=5.264;DP=453;FS=2.816;HRun=1;HaplotypeScore=62.7460;InbreedingCoeff=0.0465;MQ=52.79;MQ0=28;MQRankSum=-2.544;QD=6.22;ReadPosRankSum=-3.956;VQSLOD=-0.7609;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,1:30:15.82:16,0,534	1/1:4,1:5:5.56:30,6,0	0/0:62,4:5:3.86:0,4,25	0/1:59,11:16:25.47:25,0,35	0/1:20,0:19:71.81:188,0,72	1/1:18,2:20:26.40:164,26,0	1/1:10,0:10:21.27:161,21,0	0/1:13,0:11:82.85:83,0,85	0/1:6,0:6:22.29:80,0,22	0/0:16,0:15:10.53:0,11,193	0/1:23,0:21:1.46:1,0,126	1/1:6,0:6:2.88:15,3,0	0/1:7,0:6:15.88:16,0,56	0/0:5,0:4:8.66:0,9,59	1/1:5,1:6:17.92:142,18,0	1/1:7,2:9:12.85:134,13,0	1/1:17,4:19:41.85:366,42,0	0/0:15,0:13:10.23:0,10,112	0/1:13,0:11:80.10:130,0,80	0/1:10,0:10:23.99:107,0,24	0/1:11,0:11:28.48:99,0,28	0/0:4,0:4:8.33:0,8,59	0/0:9,0:9:19.67:0,20,120	0/0:11,0:11:3.07:0,3,139	0/0:11,0:11:7.21:0,7,75	0/1:16,1:17:85.83:176,0,86	1/1:8,0:8:16.44:97,16,0	0/1:10,0:9:16.31:112,0,16
chr10	92000802	.	AAG	A	530.18	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.042;DP=506;FS=1.697;HRun=0;HaplotypeScore=87.3145;InbreedingCoeff=0.9382;MQ=59.79;MQ0=36;MQRankSum=-1.305;QD=16.57;ReadPosRankSum=-0.075;VQSLOD=3.4046;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:66.62:0,67,1040	1/1:2,5:7:14.70:158,15,0	0/0:72,0:21:52.64:0,53,614	0/0:63,0:12:14.44:0,14,147	0/0:20,0:20:47.72:0,48,660	0/0:23,0:21:39.01:0,39,502	0/0:12,0:11:30.06:0,30,465	0/0:15,0:13:35.47:0,35,285	0/0:12,0:12:32.89:0,33,514	0/0:18,0:17:51.10:0,51,791	0/0:14,0:12:27.42:0,27,386	0/0:8,0:8:9.01:0,9,111	0/0:8,0:8:12.36:0,12,233	0/0:8,0:8:24.03:0,24,312	1/1:3,5:8:23.62:255,24,0	0/0:7,0:7:18.06:0,18,293	1/1:8,9:15:15.73:254,16,0	0/0:17,0:16:38.82:0,39,561	0/0:17,0:15:17.87:0,18,419	0/0:20,0:20:51.31:0,51,627	0/0:12,0:12:32.92:0,33,438	0/0:9,0:7:17.93:0,18,181	0/0:8,0:8:17.63:0,18,207	0/0:11,0:10:24.04:0,24,324	0/0:16,0:16:35.27:0,35,487	0/0:22,0:18:45.98:0,46,536	0/0:14,0:13:36:0,36,455	0/0:14,0:13:37.68:0,38,572
chr10	92000888	.	GA	G	408.66	PASS	AB=0.955;AC=8;AF=0.143;AN=56;BaseQRankSum=6.841;DP=456;FS=6.251;HRun=12;HaplotypeScore=51.2245;InbreedingCoeff=0.5488;MQ=54.93;MQ0=10;MQRankSum=-0.181;QD=7.43;ReadPosRankSum=1.818;VQSLOD=1.7928;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,2:31:35.28:0,35,658	1/1:3,2:5:11.33:69,11,0	0/0:4,0:3:2.53:0,3,30	0/1:7,0:5:9.37:9,0,50	0/0:17,1:19:27.68:0,28,439	0/0:19,0:20:44.87:0,45,422	0/0:14,1:14:3.79:0,4,212	0/0:25,1:26:19.51:0,20,541	0/0:14,0:15:39.01:0,39,375	0/0:16,0:17:41.92:0,42,409	0/0:8,1:9:0.81:0,1,189	0/1:9,1:9:2.20:2,0,162	0/0:10,0:9:21.04:0,21,209	0/0:12,0:12:21.03:0,21,207	1/1:10,2:12:28.64:186,29,0	0/0:12,0:14:38.80:0,39,348	1/1:13,7:20:42.22:283,42,0	0/0:23,0:20:45.01:0,45,431	0/0:19,0:18:45.03:0,45,443	0/0:19,0:19:14.15:0,14,303	0/0:22,2:24:8.08:0,8,434	0/0:14,0:14:39.03:0,39,380	0/0:12,0:12:30.06:0,30,304	0/0:21,2:22:7.77:0,8,413	0/0:18,1:20:0.31:0,0,333	0/0:22,0:22:37.63:0,38,370	0/0:17,0:17:45.02:0,45,429	0/0:14,0:11:30.06:0,30,302
chr10	92002044	.	AAG	A	3056.99	PASS	AB=0.989;AC=29;AF=0.518;AN=56;BaseQRankSum=6.074;DP=720;FS=0.664;HRun=0;HaplotypeScore=130.9273;InbreedingCoeff=-0.1323;MQ=65.44;MQ0=7;MQRankSum=-1.527;QD=5.80;ReadPosRankSum=-8.550;VQSLOD=0.5042;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,1760	0/0:14,0:14:38.93:0,39,486	0/0:57,0:31:51.47:0,51,570	0/1:41,0:19:0.13:0,0,157	0/1:31,0:30:24.99:102,0,25	0/1:23,0:23:5.74:58,0,6	1/1:20,0:20:33.21:231,33,0	0/1:25,0:22:49.12:177,0,49	0/1:22,1:23:55.16:168,0,55	0/1:28,0:27:25.79:164,0,26	0/1:33,0:33:19.71:190,0,20	1/1:17,1:17:19.73:247,20,0	0/1:19,0:18:28.20:166,0,28	0/1:19,0:19:8.27:25,0,8	0/0:36,0:36:99:0,105,1381	1/1:20,0:20:1.67:121,2,0	0/0:43,0:43:99:0,129,1866	0/1:24,0:23:0.18:168,0,0	0/1:21,0:20:27.08:145,0,27	0/1:26,1:26:24.87:236,0,25	0/1:11,0:10:1.87:53,0,2	1/1:10,0:10:7.15:99,7,0	0/1:17,0:17:20.89:97,0,21	1/1:25,0:25:21.29:199,21,0	1/1:20,1:20:15.75:195,16,0	0/1:24,0:22:14.15:187,0,14	0/1:28,2:30:55.48:99,0,55	0/1:16,1:16:29.87:102,0,30
chr10	92002045	.	AG	A	6096.16	PASS	AB=0.952;AC=45;AF=0.804;AN=56;BaseQRankSum=11.046;DP=715;FS=4.720;HRun=1;HaplotypeScore=111.5658;InbreedingCoeff=0.9214;MQ=64.80;MQ0=7;MQRankSum=-8.837;QD=11.59;ReadPosRankSum=-8.202;VQSLOD=-0.0209;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,125,1320	0/0:13,0:13:38.97:0,39,388	0/0:55,0:29:39.58:0,40,407	0/1:38,2:18:1.45:1,0,127	1/1:29,2:30:51.24:285,51,0	1/1:22,0:22:33.95:238,34,0	1/1:19,1:20:48.91:342,49,0	1/1:24,0:21:36.19:271,36,0	1/1:23,0:23:10.75:237,11,0	1/1:30,0:29:65.47:446,65,0	1/1:32,1:33:77.58:538,78,0	1/1:17,1:17:44.88:314,45,0	1/1:18,0:17:27.04:270,27,0	1/1:19,0:19:14.92:97,15,0	0/0:35,0:35:99:0,105,1087	1/1:19,1:20:33.92:213,34,0	0/0:43,0:43:99:0,129,1417	1/1:25,0:24:51.41:301,51,0	1/1:21,0:20:45.29:294,45,0	1/1:26,1:26:56.11:391,56,0	1/1:11,0:10:17.51:95,18,0	1/1:10,0:10:21.64:147,22,0	1/1:17,0:17:32.49:207,32,0	1/1:26,0:26:50.33:341,50,0	1/1:21,0:20:41.89:312,42,0	1/1:24,0:22:47.63:317,48,0	1/1:28,1:29:47.68:272,48,0	1/1:16,1:16:27.93:166,28,0
chr10	92002057	.	C	CA	3060.02	PASS	AB=0.843;AC=20;AF=0.357;AN=56;BaseQRankSum=6.281;DP=725;FS=0.440;HRun=10;HaplotypeScore=123.9356;InbreedingCoeff=0.7485;MQ=62.44;MQ0=6;MQRankSum=-4.637;QD=11.91;ReadPosRankSum=-3.877;VQSLOD=1.9701;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,114,1157	0/0:14,0:14:42.08:0,42,421	0/0:52,0:27:34.57:0,35,317	0/0:35,0:17:0.91:0,1,85	1/1:14,19:32:45.02:504,45,0	0/0:18,0:18:23.07:0,23,238	0/0:16,0:16:2.03:0,2,146	1/1:11,18:26:44.46:492,44,0	0/1:13,11:24:3.06:247,0,3	0/0:31,0:30:68.57:0,69,633	0/0:32,0:32:30.12:0,30,408	1/1:17,2:18:17.72:182,18,0	0/0:20,0:19:9.89:0,10,317	0/0:21,0:21:4.80:0,5,137	0/0:31,0:31:81.15:0,81,818	0/1:22,0:22:4.84:5,0,129	0/0:47,0:47:99:0,123,1253	0/0:27,0:26:41.87:0,42,442	1/1:7,13:19:37.74:385,38,0	1/1:15,11:25:36.57:430,37,0	1/1:5,7:11:8.32:78,8,0	0/0:10,0:10:12.23:0,12,119	0/0:17,0:17:21.09:0,21,210	0/0:24,0:24:2.56:0,3,204	0/0:25,0:24:27.82:0,28,274	1/1:9,18:25:39.28:447,39,0	1/1:12,21:33:36.27:412,36,0	1/1:10,2:12:7.43:79,7,0
chr10	92002697	.	CTT	C	5720.13	PASS	AB=0.947;AC=26;AF=0.464;AN=56;BaseQRankSum=7.261;DP=520;FS=8.895;HRun=11;HaplotypeScore=70.1364;InbreedingCoeff=0.7765;MQ=69.87;MQ0=2;MQRankSum=1.629;QD=21.26;ReadPosRankSum=3.402;VQSLOD=3.7247;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:26:31.27:0,31,856	1/1:1,11:12:24.05:255,24,0	0/1:14,0:12:7.77:8,0,45	0/0:6,0:5:5.64:0,6,27	0/0:22,0:22:51.17:0,51,785	0/0:1,1:21:3.52:0,4,79	0/0:1,1:15:1.50:0,2,83	0/0:28,0:29:62.67:0,63,856	0/0:13,0:15:35.59:0,36,494	1/1:8,32:38:93.18:982,93,0	1/1:5,20:25:54.08:571,54,0	0/0:15,0:15:39.11:0,39,543	1/1:1,10:11:27.07:287,27,0	1/1:3,9:12:27.06:287,27,0	1/1:2,16:18:42.09:447,42,0	0/0:3,0:18:29.94:0,30,103	1/1:5,15:20:20.40:393,20,0	1/1:2,17:18:45.09:479,45,0	0/0:17,1:19:3.67:0,4,438	0/0:22,0:22:63.20:0,63,931	0/0:17,0:17:39.12:0,39,580	1/1:2,26:28:66.09:688,66,0	1/1:0,26:27:51.07:598,51,0	1/1:0,7:7:18.05:192,18,0	1/1:1,18:19:48.12:511,48,0	0/1:15,2:17:21.03:21,0,493	0/0:17,0:17:39.13:0,39,600	0/0:8,0:8:23.57:0,24,332
chr10	92003197	.	TA	T	1087.39	PASS	AB=0.766;AC=28;AF=0.500;AN=56;BaseQRankSum=8.649;DP=581;FS=1.952;HRun=17;HaplotypeScore=80.3858;InbreedingCoeff=0.2839;MQ=71.11;MQ0=0;MQRankSum=-0.094;QD=3.09;ReadPosRankSum=5.130;VQSLOD=-0.1734;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,2:29:4.29:0,4,294	1/1:2,0:9:8.09:22,8,0	0/1:26,0:17:13.17:26,0,13	0/0:23,0:16:3.68:0,4,19	0/1:18,3:23:9.09:9,0,210	1/1:6,0:23:28.22:79,28,0	1/1:9,0:21:20.26:57,20,0	0/0:21,2:23:5.68:0,6,226	0/0:18,2:20:19.13:0,19,242	0/1:13,5:18:27.54:63,0,28	0/1:8,5:15:26.40:53,0,26	0/0:15,0:15:20.91:0,21,159	1/1:6,6:13:1.01:84,1,0	0/1:7,3:10:12.37:38,0,12	1/1:9,0:20:23.63:67,24,0	1/1:2,1:13:19.20:63,19,0	1/1:6,0:26:36.56:103,37,0	1/1:10,15:27:7.64:157,8,0	0/0:17,2:19:13.13:0,13,193	0/1:24,5:31:13:13,0,251	0/0:16,1:17:10.16:0,10,167	1/1:8,5:15:6.66:28,7,0	0/1:6,15:20:11.35:132,0,11	1/1:7,12:21:31.08:172,31,0	0/1:8,10:19:16.55:108,0,17	0/0:31,1:33:35.49:0,35,255	0/0:21,6:28:0.07:0,0,257	0/0:20,0:21:17.80:0,18,132
chr10	92003805	.	G	GC	14523.18	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-8.304;DP=622;FS=5.084;HRun=6;HaplotypeScore=69.0822;InbreedingCoeff=0.9987;MQ=65.25;MQ0=0;MQRankSum=-1.966;QD=29.88;ReadPosRankSum=0.671;VQSLOD=5.5757;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,123,1255	0/0:8,0:8:21.01:0,21,214	0/0:15,0:14:31.51:0,32,302	0/0:18,0:16:30:0,30,289	1/1:6,14:20:39.12:489,39,0	1/1:3,18:21:36.12:452,36,0	1/1:4,29:33:84.27:1057,84,0	1/1:3,23:26:60.19:754,60,0	1/1:2,26:28:66.21:827,66,0	1/1:5,10:15:36.10:432,36,0	1/1:3,14:17:36.12:453,36,0	1/1:2,18:20:57.18:714,57,0	1/1:2,23:25:66.21:829,66,0	1/1:0,12:12:33.10:412,33,0	0/0:26,0:26:60.12:0,60,606	1/1:4,16:20:48.15:604,48,0	0/0:22,0:22:51.08:0,51,505	1/1:2,21:23:60.19:755,60,0	1/1:7,19:26:63.20:792,63,0	1/1:7,12:19:48.11:584,48,0	1/1:5,19:24:54.97:665,55,0	1/1:0,19:19:45.14:564,45,0	1/1:3,13:16:30.10:376,30,0	1/1:7,21:28:72.16:853,72,0	1/1:3,18:21:57.18:709,57,0	1/1:4,21:25:60.19:754,60,0	1/1:3,24:26:63.19:773,63,0	1/1:3,18:21:54.17:675,54,0
chr10	92003869	.	ATTTT	A	5827.90	PASS	AB=0.688;AC=25;AF=0.446;AN=56;BaseQRankSum=-0.447;DP=587;FS=4.409;HRun=15;HaplotypeScore=132.5123;InbreedingCoeff=0.9180;MQ=66.36;MQ0=3;MQRankSum=-3.999;QD=22.94;ReadPosRankSum=4.884;VQSLOD=3.4761;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:39:98.90:0,99,1602	1/1:1,0:12:22.57:187,23,0	0/0:48,0:20:31.40:0,31,375	0/0:32,0:16:22.48:0,22,269	1/1:3,18:21:44.88:546,45,0	0/0:8,0:17:36.09:0,36,456	0/0:13,0:20:38.92:0,39,441	0/1:12,9:19:89.87:292,0,90	1/1:12,9:21:44.81:554,45,0	0/0:5,0:16:42.05:0,42,499	0/0:9,0:15:27.94:0,28,324	1/1:7,6:14:25.22:313,25,0	0/0:17,0:22:44.94:0,45,438	0/0:9,0:16:35.91:0,36,368	1/1:8,0:20:38.68:298,39,0	0/0:11,0:15:35.95:0,36,405	1/1:4,0:21:35.69:283,36,0	0/0:17,0:24:55.35:0,55,758	1/1:6,14:24:33.32:636,33,0	1/1:5,16:21:44.84:564,45,0	1/1:2,21:24:29.51:615,30,0	0/0:12,0:15:35.98:0,36,439	0/0:5,0:11:26.95:0,27,319	0/0:16,0:27:66.07:0,66,775	0/0:9,0:16:32.78:0,33,382	1/1:6,20:27:39.53:798,40,0	1/1:8,12:23:49.23:621,49,0	1/1:3,1:4:9:121,9,0
chr10	92004071	.	G	GT	7729.15	PASS	AB=0.938;AC=25;AF=0.446;AN=56;BaseQRankSum=-15.142;DP=623;FS=1.392;HRun=7;HaplotypeScore=60.7800;InbreedingCoeff=0.9259;MQ=79.44;MQ0=0;MQRankSum=0.728;QD=28.31;ReadPosRankSum=2.669;VQSLOD=5.6196;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.12:0,81,782	0/0:13,0:13:36.06:0,36,347	0/1:14,1:15:27.89:28,0,263	0/0:19,0:19:22.57:0,23,361	0/0:25,0:25:69.09:0,69,658	1/1:4,16:20:45.14:544,45,0	1/1:2,22:24:63.19:761,63,0	0/0:21,0:21:54.06:0,54,511	0/0:24,0:24:60.06:0,60,572	1/1:2,20:22:60.18:725,60,0	1/1:0,18:18:51.16:616,51,0	0/0:29,0:29:84.13:0,84,811	1/1:1,18:19:51.16:616,51,0	1/1:4,14:18:45.13:536,45,0	0/0:29,0:29:72.11:0,72,695	1/1:1,17:18:22.18:551,22,0	0/0:20,0:20:54.09:0,54,521	1/1:3,18:21:51.16:616,51,0	0/0:30,0:30:66.08:0,66,631	0/0:18,0:18:45.05:0,45,428	0/0:32,0:32:93.15:0,93,898	1/1:3,23:26:63.15:744,63,0	1/1:4,18:22:51.16:615,51,0	1/1:1,29:30:81.25:979,81,0	1/1:4,16:20:33.10:399,33,0	0/0:23,0:23:63.08:0,63,599	0/0:31,0:31:90.07:0,90,851	0/0:6,0:6:18.03:0,18,174
chr10	92007151	.	TA	T	1265.23	PASS	AB=0.671;AC=17;AF=0.304;AN=56;BaseQRankSum=3.014;DP=584;FS=0.887;HRun=15;HaplotypeScore=78.5824;InbreedingCoeff=0.4817;MQ=77.80;MQ0=2;MQRankSum=1.252;QD=6.17;ReadPosRankSum=3.268;VQSLOD=2.9132;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,2:37:71.91:0,72,721	0/0:16,0:16:28.42:0,28,140	0/0:23,0:16:9.25:0,9,55	0/0:15,0:11:1:0,1,36	0/0:16,1:18:8.03:0,8,178	0/0:17,2:21:6.12:0,6,274	0/1:14,3:18:22.69:23,0,210	1/1:5,15:22:36.16:266,36,0	0/0:26,0:26:47.96:0,48,412	1/1:11,17:28:47.11:303,47,0	1/1:5,16:21:5.90:196,6,0	0/0:15,1:16:6.05:0,6,147	0/1:6,10:16:10.58:62,0,11	1/1:7,8:15:5.84:38,6,0	0/0:20,1:21:20.62:0,21,168	0/0:27,0:27:59.62:0,60,498	0/0:34,1:35:63.61:0,64,393	1/1:6,7:14:16.75:102,17,0	0/0:21,0:22:29.36:0,29,250	0/0:17,1:18:7.54:0,8,172	0/0:12,0:12:21:0,21,184	1/1:6,5:11:11.72:77,12,0	0/1:11,7:19:3.66:98,0,4	0/1:5,11:16:21.71:92,0,22	0/1:10,14:25:29.62:190,0,30	0/0:22,0:25:21.75:0,22,301	0/0:28,0:28:42.25:0,42,522	0/0:18,0:18:35.96:0,36,303
chr10	92007696	.	A	AGTGTGTGTGT	10222.33	PASS	AB=0.833;AC=38;AF=0.679;AN=56;BaseQRankSum=6.194;DP=674;FS=0.445;HRun=0;HaplotypeScore=221.1769;InbreedingCoeff=0.6866;MQ=68.04;MQ0=11;MQRankSum=-7.865;QD=23.94;ReadPosRankSum=-4.270;VQSLOD=3.4121;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:34:72.24:0,72,1991	0/0:10,0:11:30.06:0,30,777	0/0:61,0:29:3.17:0,3,224	0/1:52,0:31:39.73:40,0,301	0/1:5,3:10:0:0,0,0	0/0:10,0:11:24.08:0,24,712	0/0:34,0:35:63.11:0,63,1387	1/1:18,0:18:30.50:769,30,0	1/1:5,2:26:15.52:563,16,0	1/1:24,0:23:37.13:1002,37,0	1/1:11,0:11:9.02:124,9,0	1/1:6,11:21:30.10:1426,30,0	1/1:32,0:32:45.68:729,46,0	1/1:18,0:18:14.21:483,14,0	0/0:24,0:24:57.20:0,57,1666	0/0:22,0:23:11.86:0,12,1273	0/0:47,0:48:84.02:0,84,2877	1/1:12,0:20:24.08:958,24,0	1/1:12,6:19:38.95:1037,39,0	1/1:9,0:18:2.10:130,2,0	1/1:30,24:55:1.21:77,1,0	1/1:15,0:14:3.01:50,3,0	1/1:9,0:9:5.48:178,5,0	1/1:22,0:22:11.95:97,12,0	1/1:11,0:11:3:25,3,0	1/1:17,1:25:49.66:1669,50,0	1/1:6,1:12:18.06:842,18,0	1/1:8,0:8:2.99:24,3,0
chr10	92008568	.	C	CT	4672.44	PASS	AB=0.971;AC=21;AF=0.375;AN=56;BaseQRankSum=-9.639;DP=644;FS=2.588;HRun=10;HaplotypeScore=73.0652;InbreedingCoeff=0.9130;MQ=72.48;MQ0=12;MQRankSum=-2.545;QD=18.54;ReadPosRankSum=0.501;VQSLOD=5.5981;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,108,883	0/0:18,0:17:35.91:0,36,290	0/1:33,1:21:30.29:30,0,131	0/0:31,0:22:20.04:0,20,177	1/1:8,23:30:38.49:608,38,0	0/0:19,0:19:44.93:0,45,369	0/0:25,0:25:59.35:0,59,467	1/1:8,26:32:77:798,77,0	1/1:3,14:17:42.11:448,42,0	0/0:29,0:25:27.74:0,28,348	0/0:21,0:19:26.24:0,26,205	1/1:2,11:12:24.06:256,24,0	0/0:10,0:9:13.15:0,13,120	0/0:9,0:8:14.48:0,14,122	0/0:25,0:23:59.89:0,60,489	0/0:23,1:24:27.91:0,28,436	0/0:34,0:33:85.91:0,86,695	0/0:17,0:17:38.85:0,39,320	1/1:10,11:20:14.85:358,15,0	1/1:0,18:16:48.12:511,48,0	1/1:6,17:23:36.09:384,36,0	0/0:11,0:11:28.64:0,29,244	0/0:25,0:22:59.92:0,60,492	0/0:32,0:30:81.37:0,81,666	0/0:19,0:18:19.88:0,20,171	1/1:4,15:20:41.91:418,42,0	1/1:5,20:24:48.12:512,48,0	1/1:2,13:13:33.08:352,33,0
chr10	92008667	.	CCTT	C	3467.98	PASS	AB=0.624;AC=9;AF=0.161;AN=56;BaseQRankSum=13.102;DP=539;FS=2.908;HRun=0;HaplotypeScore=93.5421;InbreedingCoeff=-0.1926;MQ=63.90;MQ0=7;MQRankSum=-10.627;QD=22.23;ReadPosRankSum=0.342;VQSLOD=3.6316;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.30:0,87,2118	0/0:7,0:6:15.05:0,15,353	0/0:19,0:16:27.44:0,27,879	0/0:23,0:11:26.07:0,26,596	0/0:24,0:24:72.22:0,72,1690	0/0:25,0:25:72.25:0,72,1774	0/0:16,0:16:48.16:0,48,1167	0/0:30,0:29:87.30:0,87,2047	0/0:15,0:15:42.14:0,42,1032	0/1:16,14:28:99:643,0,862	0/1:8,12:20:99:502,0,537	0/0:12,0:12:33.11:0,33,814	0/1:3,7:10:99:307,0,194	0/1:4,9:13:99:358,0,253	0/0:22,0:22:63.22:0,63,1553	0/0:18,0:18:51.18:0,51,1236	0/0:33,0:33:96.33:0,96,2333	0/1:6,8:12:99:249,0,337	0/0:21,0:20:57.20:0,57,1385	0/0:21,0:21:57.20:0,57,1400	0/0:19,0:19:54.19:0,54,1300	0/1:5,8:13:99:357,0,262	0/1:9,13:22:99:454,0,468	0/1:3,10:13:95.92:96,0,207	0/1:11,10:21:99:501,0,608	0/0:19,0:19:54.19:0,54,1331	0/0:17,0:17:51.18:0,51,1241	0/0:11,0:8:21.07:0,21,501
chr10	92009289	.	AGT	A	165.19	PASS	AB=0.974;AC=8;AF=0.154;AN=52;BaseQRankSum=-1.163;DP=737;FS=0.000;HRun=0;HaplotypeScore=137.9356;InbreedingCoeff=0.0633;MQ=63.18;MQ0=19;MQRankSum=2.503;QD=0.91;ReadPosRankSum=-0.325;VQSLOD=2.3026;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,3:34:14.48:134,14,0	0/0:8,0:8:5.99:0,6,49	./.	0/0:49,0:21:1.25:0,1,3	./.	0/0:29,0:28:1.83:0,2,5	0/0:30,0:30:6.33:0,6,37	0/0:24,0:23:9.95:0,10,59	0/0:27,0:25:7.85:0,8,93	0/1:27,0:27:18.02:18,0,177	0/0:19,0:19:23.93:0,24,301	0/0:34,0:32:9.36:0,9,97	0/0:23,0:23:32.21:0,32,412	0/1:18,1:19:7.42:7,0,288	0/0:23,0:24:3.01:0,3,36	0/0:37,0:37:14.66:0,15,112	0/0:31,0:30:10.31:0,10,77	0/1:22,0:22:2.01:2,0,345	0/0:11,0:11:11.97:0,12,110	0/0:19,0:19:8.50:0,8,57	0/0:67,0:65:12.41:0,12,117	0/1:16,1:17:39.41:39,0,100	0/0:13,0:13:9.50:0,10,136	0/1:35,2:36:74.09:74,0,483	0/1:24,0:23:15.12:15,0,131	0/0:24,0:24:12.28:0,12,83	0/0:22,0:24:14.80:0,15,117	0/0:5,0:5:6.46:0,6,49
chr10	92009386	.	CTGTG	C	1876.47	PASS	AB=0.751;AC=14;AF=0.269;AN=52;BaseQRankSum=0.287;DP=746;FS=2.680;HRun=0;HaplotypeScore=148.0862;InbreedingCoeff=0.3828;MQ=62.07;MQ0=23;MQRankSum=1.580;QD=7.60;ReadPosRankSum=3.303;VQSLOD=2.9261;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:34.58:0,35,747	0/0:3,0:10:2.82:0,3,52	./.	./.	0/0:25,0:24:26.74:0,27,480	0/0:24,0:24:23.71:0,24,365	0/1:34,1:35:13.81:14,0,569	0/0:27,0:23:16.65:0,17,196	0/0:24,0:24:15.44:0,15,162	0/1:17,11:27:3.48:163,0,3	0/1:8,9:17:18.93:41,0,19	0/0:26,0:26:21.69:0,22,304	1/1:5,12:16:6.26:135,6,0	1/1:18,2:20:16.53:193,17,0	0/0:20,0:35:5.87:0,6,76	0/0:25,0:26:37.99:0,38,610	0/0:19,0:18:23.49:0,23,247	1/1:12,17:31:15.19:467,15,0	0/0:18,0:25:26.67:0,27,382	0/0:24,0:23:21.04:0,21,282	0/0:56,0:53:29.35:0,29,539	0/1:13,5:19:23.40:141,0,23	0/1:13,9:22:25.81:135,0,26	0/1:21,14:36:18.78:278,0,19	1/1:14,7:21:38.23:477,38,0	0/0:28,1:29:45.19:0,45,703	0/0:12,0:30:20.38:0,20,191	0/0:11,0:11:18.53:0,19,291
chr10	92010625	.	TGG	T	2374.02	PASS	AB=0.809;AC=24;AF=0.429;AN=56;BaseQRankSum=-2.454;DP=427;FS=2.457;HRun=12;HaplotypeScore=74.6850;InbreedingCoeff=0.3957;MQ=79.09;MQ0=2;MQRankSum=-1.621;QD=9.50;ReadPosRankSum=4.848;VQSLOD=1.5504;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:15:0,15,151	0/0:4,0:11:3.09:0,3,32	0/0:18,1:19:4.27:0,4,293	0/0:17,1:17:0.70:0,1,151	1/1:4,7:13:14.46:115,14,0	0/0:16,0:16:8.96:0,9,69	0/0:15,0:19:23.96:0,24,248	0/1:8,8:16:4.80:155,0,5	1/1:7,13:20:29.56:269,30,0	0/0:10,0:10:6.02:0,6,65	0/0:7,0:7:6.01:0,6,58	1/1:11,9:20:18:183,18,0	0/0:7,0:7:3.01:0,3,34	0/1:17,0:18:12.95:13,0,135	0/1:11,1:14:33.58:34,0,117	0/0:11,0:12:27:0,27,298	0/1:4,4:26:77.22:77,0,84	0/1:8,0:8:7.53:8,0,65	1/1:9,10:19:33.03:334,33,0	1/1:6,8:15:20.72:194,21,0	1/1:14,23:37:56.20:576,56,0	0/0:7,0:8:1.23:0,1,30	0/1:6,0:7:21.49:21,0,28	0/0:20,0:21:4.13:0,4,250	0/0:11,0:12:9.37:0,9,106	1/1:9,3:12:12:122,12,0	1/1:1,13:14:23.91:244,24,0	1/1:1,7:10:17.51:217,18,0
chr10	92014092	.	GAC	G	425.11	PASS	AB=1.000;AC=15;AF=0.288;AN=52;BaseQRankSum=3.720;DP=558;FS=0.000;HRun=0;HaplotypeScore=72.4565;InbreedingCoeff=0.7064;MQ=69.89;MQ0=53;MQRankSum=0.274;QD=3.30;ReadPosRankSum=0.406;VQSLOD=1.8880;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:75.22:0,75,1136	0/0:10,0:10:27.08:0,27,380	0/0:42,0:21:42.23:0,42,651	0/0:38,0:22:56.49:0,56,843	./.	0/0:14,0:14:36.12:0,36,566	0/0:28,0:28:69.03:0,69,1044	0/0:23,0:17:47.39:0,47,454	0/0:18,0:13:2.97:0,3,26	1/1:2,7:9:21.06:259,21,0	0/1:8,0:8:0:0,0,0	0/0:30,0:29:11.82:0,12,113	1/1:17,0:17:2.90:31,3,0	1/1:17,0:17:2.90:30,3,0	0/0:16,0:16:44.94:0,45,678	0/0:15,0:15:36.07:0,36,537	0/0:36,0:36:87.98:0,88,1255	1/1:23,1:24:8.92:100,9,0	0/0:18,0:12:26.23:0,26,226	0/0:10,0:3:9.01:0,9,83	0/0:39,0:25:3:0,3,25	1/1:0,13:13:2.98:41,3,0	1/1:11,0:11:3:28,3,0	1/1:30,0:30:8.85:92,9,0	./.	0/0:14,0:11:24:0,24,212	0/0:12,0:12:8.90:0,9,94	0/0:12,0:10:6:0,6,52
chr10	92014094	.	CACGT	C	613.61	PASS	AB=0.500;AC=15;AF=0.278;AN=54;BaseQRankSum=2.731;DP=556;FS=0.935;HRun=0;HaplotypeScore=80.7125;InbreedingCoeff=0.6745;MQ=65.82;MQ0=53;MQRankSum=-0.086;QD=4.68;ReadPosRankSum=1.390;VQSLOD=1.8171;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:35:87.12:0,87,1298	0/0:10,0:10:27.06:0,27,357	0/0:38,0:17:42.23:0,42,651	0/0:36,0:20:56.49:0,56,843	./.	0/0:14,0:14:36.12:0,36,566	0/0:29,0:29:69.07:0,69,1044	0/0:23,0:17:47.54:0,48,454	0/0:18,0:13:2.93:0,3,51	1/1:8,0:8:20.34:258,20,0	0/1:0,8:8:0:0,0,0	0/0:29,0:28:9.63:0,10,85	1/1:1,16:17:2:61,2,0	1/1:0,0:18:2.58:30,3,0	0/0:16,0:16:45.14:0,45,689	0/0:16,0:16:34.93:0,35,523	0/0:34,0:34:86.20:0,86,1290	1/1:2,21:23:7.72:161,8,0	0/0:17,0:11:26.23:0,26,226	0/0:10,0:3:8.98:0,9,76	0/0:39,0:25:3:0,3,25	1/1:13,0:13:2.98:43,3,0	1/1:0,0:11:3:28,3,0	1/1:3,30:33:8.86:187,9,0	0/0:0,14:14:0:0,0,0	0/0:13,0:10:24.02:0,24,263	0/0:12,0:12:7.01:0,7,66	0/0:12,0:10:6.02:0,6,103
chr10	92015781	.	A	AC	6811.68	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=9.438;DP=617;FS=0.000;HRun=0;HaplotypeScore=88.3555;InbreedingCoeff=0.9996;MQ=72.04;MQ0=2;MQRankSum=2.226;QD=37.02;ReadPosRankSum=3.961;VQSLOD=4.9032;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.22:0,81,1091	0/0:11,0:11:33.11:0,33,461	0/0:32,0:28:66.25:0,66,806	0/0:29,0:21:34.97:0,35,371	0/0:33,0:33:99:0,99,1374	0/0:21,0:21:63.20:0,63,863	0/0:21,0:21:60.19:0,60,819	0/0:21,0:21:63.20:0,63,851	0/0:17,0:17:48.10:0,48,618	1/1:0,31:31:90.20:1182,90,0	1/1:0,20:20:60.20:860,60,0	0/0:28,0:28:77.94:0,78,994	1/1:1,17:18:48.15:695,48,0	1/1:0,13:13:30.10:432,30,0	0/0:24,0:24:66.21:0,66,896	0/0:19,0:19:57.13:0,57,715	0/0:26,0:26:78.26:0,78,1084	1/1:0,11:11:27.09:382,27,0	0/0:21,0:21:63.20:0,63,863	0/0:19,0:19:54.17:0,54,737	0/0:19,0:19:54.18:0,54,755	1/1:1,19:20:57.09:790,57,0	1/1:0,14:14:29.96:425,30,0	1/1:2,34:35:82.25:1237,82,0	1/1:1,20:21:57.19:809,57,0	0/0:27,0:27:78.25:0,78,1060	0/0:26,0:26:78.18:0,78,1022	0/0:12,0:12:33.11:0,33,461
chr10	92015912	.	AACACAC	A	907.45	PASS	AB=1.000;AC=7;AF=0.135;AN=52;BaseQRankSum=2.249;DP=543;FS=0.000;HRun=0;HaplotypeScore=155.7360;InbreedingCoeff=0.5876;MQ=58.47;MQ0=8;MQRankSum=-4.104;QD=12.96;ReadPosRankSum=0.183;VQSLOD=2.8574;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:39:64.28:0,64,1539	1/1:5,6:11:14.91:236,15,0	0/0:25,0:8:2.92:0,3,17	0/0:32,0:17:8:0,8,88	0/0:16,0:17:3.27:0,3,148	0/0:9,0:22:9.83:0,10,144	0/0:26,0:26:19.90:0,20,309	0/0:16,0:16:12.03:0,12,276	0/0:15,0:16:6.85:0,7,36	0/1:15,0:15:1.19:1,0,83	0/0:8,0:7:6:0,6,73	0/0:24,0:25:18.70:0,19,156	0/0:16,0:16:19.15:0,19,161	0/0:15,0:15:0.89:0,1,2	1/1:9,9:18:36.11:458,36,0	0/0:9,0:29:7.38:0,7,87	1/1:12,14:26:11.29:343,11,0	0/0:15,0:15:19.06:0,19,155	0/0:17,0:16:17.13:0,17,242	0/0:20,0:20:17.89:0,18,231	0/0:32,0:30:7.78:0,8,68	./.	./.	0/0:24,0:23:21.43:0,21,191	0/0:15,0:15:12.49:0,12,168	0/0:19,0:19:35.90:0,36,659	0/0:10,0:12:7.71:0,8,142	0/0:4,0:4:3:0,3,25
chr10	92015942	.	CAAACCCAA	C	4629.84	PASS	AB=0.973;AC=30;AF=0.577;AN=52;BaseQRankSum=1.068;DP=595;FS=32.054;HRun=0;HaplotypeScore=157.8090;InbreedingCoeff=-0.2451;MQ=41.36;MQ0=35;MQRankSum=-1.353;QD=11.90;ReadPosRankSum=-0.390;VQSLOD=2.2732;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:3.98:0,4,2635	0/1:10,0:10:52.59:54,0,53	0/0:65,0:5:8.81:0,9,130	0/0:61,0:7:14.17:0,14,169	0/1:16,1:17:53.59:245,0,54	0/1:19,0:19:89.31:89,0,421	0/1:24,0:26:99:342,0,645	0/0:19,0:18:20.13:0,20,471	0/1:15,0:14:10.45:215,0,10	0/1:13,0:9:9.24:371,0,9	./.	1/1:24,5:29:0.08:491,0,0	1/1:8,0:8:17.87:284,18,0	1/1:9,0:9:3.01:50,3,0	0/1:24,0:24:16.38:16,0,155	0/1:27,2:29:99:260,0,653	0/1:27,0:27:99:144,0,542	1/1:7,0:7:18.95:291,19,0	0/1:20,0:20:99:165,0,306	0/1:20,1:21:46.92:203,0,47	0/1:37,0:34:99:130,0,162	./.	1/1:1,4:5:3:29,3,0	1/1:18,0:17:23.76:382,24,0	1/1:9,0:8:2.92:23,3,0	0/1:18,2:19:83.02:341,0,83	0/1:16,1:17:63.67:405,0,64	1/1:8,0:8:5.41:100,5,0
chr10	92015943	.	AAACC	A	2461.21	PASS	AB=0.995;AC=28;AF=0.538;AN=52;BaseQRankSum=2.944;DP=589;FS=29.274;HRun=0;HaplotypeScore=146.1226;InbreedingCoeff=-0.1620;MQ=39.86;MQ0=36;MQRankSum=0.713;QD=6.84;ReadPosRankSum=-1.033;VQSLOD=1.1498;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:30.98:0,31,1765	0/1:10,0:10:18.90:19,0,45	0/0:66,0:4:9.39:0,9,96	0/0:61,0:7:11.82:0,12,143	0/1:17,0:17:64.05:87,0,64	0/1:18,0:19:34.56:35,0,263	0/1:25,0:25:99:192,0,420	0/0:19,0:18:44.40:0,44,632	0/1:16,0:15:5.20:101,0,5	0/1:12,0:8:11.79:234,0,12	./.	0/1:31,0:31:11.52:228,0,12	1/1:8,0:8:18.03:234,18,0	1/1:0,9:9:3.01:51,3,0	0/0:22,1:23:6.46:0,6,152	0/1:28,0:29:99:153,0,373	0/1:25,2:27:99:132,0,290	1/1:7,0:7:17.59:229,18,0	0/1:20,0:20:52.49:52,0,307	0/1:20,0:20:83.51:84,0,84	0/1:37,0:34:53.70:54,0,179	./.	1/1:5,0:5:2.92:17,3,0	1/1:18,0:17:21.04:271,21,0	1/1:7,0:6:2.73:24,3,0	0/1:17,0:16:99:116,0,234	0/1:17,0:17:99:210,0,104	1/1:8,0:8:17.14:102,17,0
chr10	92015950	.	A	AACAC	3561.17	PASS	AB=0.871;AC=32;AF=0.593;AN=54;BaseQRankSum=1.490;DP=628;FS=3.637;HRun=0;HaplotypeScore=158.7604;InbreedingCoeff=0.5423;MQ=39.37;MQ0=40;MQRankSum=-6.098;QD=9.89;ReadPosRankSum=-5.150;VQSLOD=1.7292;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:86.58:0,87,1294	0/0:10,0:10:9.02:0,9,125	0/0:68,0:4:6.85:0,7,61	0/0:64,0:5:8.48:0,8,73	1/1:15,3:18:17.02:272,17,0	0/0:19,0:19:18.03:0,18,275	0/0:24,0:24:38.98:0,39,557	1/1:24,0:23:44.83:522,45,0	1/1:6,12:20:11.36:263,11,0	1/1:12,0:8:6.21:33,6,0	./.	1/1:12,18:30:21.85:499,22,0	0/1:7,0:7:0:0,0,0	1/1:10,0:10:2.88:15,3,0	0/1:29,0:29:0.02:0,0,0	0/0:29,0:29:32.31:0,32,511	0/1:28,0:28:3.05:3,0,416	1/1:7,0:7:0.47:2,0,0	1/1:17,1:18:29.89:381,30,0	1/1:8,10:20:11.05:164,11,0	0/1:15,26:44:12.39:175,0,12	1/1:15,0:15:4.15:19,4,0	0/0:6,0:6:0:0,0,0	0/1:18,0:17:0:1,0,0	1/1:7,0:7:1.82:5,2,0	1/1:20,1:19:29.01:488,29,0	1/1:15,4:19:27.75:580,28,0	0/1:3,4:7:76.75:138,0,77
chr10	92015964	.	CAG	C	1427.50	PASS	AB=0.980;AC=31;AF=0.554;AN=56;BaseQRankSum=0.887;DP=599;FS=10.080;HRun=0;HaplotypeScore=141.7275;InbreedingCoeff=0.1329;MQ=40.97;MQ0=25;MQRankSum=-2.894;QD=4.08;ReadPosRankSum=-3.489;VQSLOD=1.3993;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:51.23:0,51,1127	0/1:7,1:8:22.37:22,0,110	0/0:47,0:4:1.17:0,1,20	0/0:62,0:5:1.86:0,2,34	0/1:20,0:20:19.60:20,0,113	0/0:18,0:17:11.38:0,11,282	0/1:26,0:26:7.70:8,0,400	0/1:30,0:29:44.30:200,0,44	0/0:22,0:22:7.38:0,7,76	1/1:12,0:10:24.69:183,25,0	1/1:4,0:4:5.99:50,6,0	0/1:31,0:30:44.01:44,0,88	1/1:6,0:6:11.97:95,12,0	1/1:11,0:11:11.81:86,12,0	0/0:25,0:25:4.71:0,5,18	0/0:28,0:28:5.17:0,5,511	0/1:24,2:26:84.06:84,0,336	1/1:3,0:3:4.22:24,4,0	1/1:16,0:16:8.90:152,9,0	1/1:19,0:19:5.52:62,6,0	0/1:49,0:46:26.38:26,0,53	1/1:9,2:11:5.91:40,6,0	1/1:9,1:10:8.69:75,9,0	1/1:16,0:16:28.15:218,28,0	1/1:2,7:9:3.01:36,3,0	0/1:24,0:22:99:135,0,148	0/1:19,0:19:43.71:44,0,136	0/0:7,0:7:12.26:0,12,94
chr10	92015966	.	GAC	G	37.86	PASS	AB=0.971;AC=15;AF=0.288;AN=52;BaseQRankSum=2.676;DP=608;FS=10.823;HRun=0;HaplotypeScore=147.9707;InbreedingCoeff=0.1190;MQ=42.33;MQ0=24;MQRankSum=-0.624;QD=0.16;ReadPosRankSum=0.435;VQSLOD=2.3663;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:42:18.20:18,0,792	0/1:8,0:8:8.53:9,0,60	./.	0/1:58,0:6:0:0,0,0	0/0:22,0:22:21.69:0,22,229	0/1:15,1:15:12.52:13,0,273	0/1:24,3:28:78.08:78,0,386	0/0:33,0:32:4.65:0,5,191	0/0:22,0:22:1.18:0,1,171	0/0:14,0:12:6.08:0,6,59	./.	0/0:30,0:29:21.72:0,22,205	0/0:6,0:6:1.72:0,2,4	1/1:9,0:9:2.20:7,2,0	0/0:27,0:27:4.78:0,5,18	0/0:26,1:27:2.37:0,2,433	0/1:28,0:28:1.70:2,0,239	0/0:5,0:5:6.82:0,7,42	0/0:18,0:18:18.61:0,19,124	0/0:19,0:19:5.02:0,5,28	0/0:50,0:49:13.43:0,13,153	1/1:11,0:11:2.48:9,2,0	1/1:10,0:10:0.40:1,0,0	0/0:17,0:17:1.92:0,2,19	1/1:7,0:7:2.96:19,3,0	0/0:25,0:23:33.53:0,34,269	0/1:18,0:18:0.07:0,0,264	0/0:7,0:7:14.98:0,15,143
chr10	92015968	.	C	CAG	717.23	PASS	AB=0.972;AC=12;AF=0.214;AN=56;BaseQRankSum=3.710;DP=615;FS=9.594;HRun=0;HaplotypeScore=155.6825;InbreedingCoeff=-0.1863;MQ=41.39;MQ0=23;MQRankSum=-6.691;QD=2.53;ReadPosRankSum=2.880;VQSLOD=2.0992;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:77.58:0,78,1144	0/0:10,0:10:17.71:0,18,153	0/0:43,0:5:2.95:0,3,40	0/0:56,0:5:2.16:0,2,41	0/1:21,1:22:55.45:55,0,173	0/0:17,0:16:24:0,24,336	0/0:29,0:29:53.66:0,54,595	0/1:34,0:33:99:149,0,285	0/1:22,0:22:52.63:53,0,92	0/0:14,0:12:29.02:0,29,215	0/0:4,0:4:5.99:0,6,50	0/1:30,0:29:76.21:109,0,76	0/0:6,0:6:11.99:0,12,103	0/0:6,0:6:9.39:0,9,66	1/1:29,0:29:2:6,2,0	0/0:24,0:24:32.46:0,32,526	0/0:28,0:28:47.43:0,47,466	0/0:6,0:6:11.94:0,12,90	0/1:17,5:22:99:143,0,175	0/1:20,0:20:9.76:51,0,10	0/1:52,0:51:35.51:36,0,137	0/0:11,0:11:5.79:0,6,33	0/0:11,0:11:9.26:0,9,73	0/0:17,0:17:29.67:0,30,231	0/0:7,0:7:2.94:0,3,18	0/1:26,0:24:99:118,0,256	0/1:18,1:19:99:119,0,171	0/1:7,0:7:20.03:20,0,51
chr10	92015972	.	C	CACACAG	335.46	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=4.000;DP=613;FS=12.567;HRun=0;HaplotypeScore=182.4920;InbreedingCoeff=0.0119;MQ=42.17;MQ0=21;MQRankSum=-4.547;QD=3.35;ReadPosRankSum=1.795;VQSLOD=2.1392;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,102,1590	0/1:10,0:10:51.98:91,0,52	0/0:37,0:4:2.94:0,3,18	0/0:52,0:7:2.33:0,2,20	0/0:20,0:20:6.14:0,6,223	0/0:17,0:16:27.08:0,27,531	0/0:31,0:31:51.89:0,52,859	0/0:34,0:33:47.40:0,47,352	0/0:23,0:23:8.17:0,8,120	0/0:14,0:12:28.07:0,28,202	1/1:3,0:3:0.88:2,1,0	0/1:32,0:31:7.84:8,0,141	0/0:6,0:6:8.99:0,9,76	0/0:6,0:6:6.43:0,6,45	0/0:15,13:30:0.85:0,1,2	0/0:25,0:25:38.85:0,39,783	0/1:29,0:29:99:302,0,302	0/0:8,0:8:17.89:0,18,135	0/0:20,0:20:2.49:0,2,171	0/0:20,0:20:9.43:0,9,76	0/0:54,0:53:14.76:0,15,217	0/0:11,0:11:8.89:0,9,71	0/0:10,0:10:8.48:0,8,72	0/0:18,0:18:26.91:0,27,214	0/0:6,0:6:2.94:0,3,18	0/1:26,0:24:36.82:37,0,322	0/0:19,0:19:23.68:0,24,290	0/0:8,0:8:6.18:0,6,114
chr10	92015984	.	CAG	C	3067.14	PASS	AB=0.993;AC=34;AF=0.607;AN=56;BaseQRankSum=0.804;DP=628;FS=15.027;HRun=0;HaplotypeScore=143.4300;InbreedingCoeff=0.2269;MQ=47.79;MQ0=12;MQRankSum=-0.333;QD=6.57;ReadPosRankSum=-6.031;VQSLOD=0.4402;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:22.15:0,22,936	0/0:10,0:10:15.41:0,15,155	0/1:35,0:9:4.85:5,0,54	0/1:41,0:12:40.96:68,0,41	0/1:23,0:23:36.51:107,0,37	0/0:20,0:19:7.66:0,8,387	0/0:28,0:28:13.37:0,13,546	0/1:34,1:34:49.39:382,0,49	0/1:20,1:21:40.95:61,0,41	1/1:16,0:14:34.03:253,34,0	1/1:3,0:3:8.99:75,9,0	0/1:29,0:28:43.27:67,0,43	1/1:9,0:9:17.67:134,18,0	1/1:7,0:7:14.89:114,15,0	0/0:31,0:31:13.70:0,14,93	0/1:25,0:25:16.42:16,0,553	0/0:30,0:30:33.52:0,34,388	1/1:16,0:16:34.58:248,35,0	0/1:22,0:22:91.56:157,0,92	1/1:22,0:22:19.98:181,20,0	1/1:57,0:56:15.66:267,16,0	1/1:6,2:8:17.92:152,18,0	1/1:12,1:13:20.94:172,21,0	1/1:22,0:22:40.10:312,40,0	1/1:8,0:8:9.01:86,9,0	1/1:25,0:24:11.90:221,12,0	0/1:20,0:20:55.80:133,0,56	0/1:10,0:10:43.77:47,0,44
chr10	92015986	.	GAC	G	169.84	PASS	AB=0.982;AC=19;AF=0.339;AN=56;BaseQRankSum=2.053;DP=623;FS=1.833;HRun=0;HaplotypeScore=155.0913;InbreedingCoeff=-0.0245;MQ=50.02;MQ0=12;MQRankSum=1.619;QD=0.56;ReadPosRankSum=-4.301;VQSLOD=1.5557;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,1:39:40.32:0,40,976	0/0:10,0:10:11.97:0,12,161	0/0:39,0:12:29.12:0,29,259	0/0:39,0:13:19.49:0,19,177	0/1:24,0:24:11.85:12,0,195	0/1:20,1:20:0.48:0,0,440	0/0:28,0:28:50.39:0,50,647	0/1:35,0:34:99:101,0,150	0/1:20,0:20:9.23:9,0,148	0/0:16,0:14:8:0,8,69	1/1:4,0:4:0.47:1,0,0	0/0:26,0:25:4.98:0,5,177	0/0:9,0:9:0.64:0,1,2	0/1:7,0:7:0.10:3,0,0	0/0:28,0:28:13.81:0,14,155	0/1:23,2:25:29.59:30,0,551	0/1:29,1:30:25.68:26,0,462	0/0:16,0:16:12.95:0,13,74	0/0:21,0:21:0.93:0,1,72	0/1:21,0:22:15.04:18,0,15	0/1:58,0:57:56.26:56,0,110	1/1:8,0:8:2.92:10,3,0	1/1:13,0:13:0.44:1,0,0	0/0:22,0:22:2.34:0,2,21	1/1:8,0:8:4.77:24,5,0	0/0:25,0:24:3.59:0,4,202	0/1:19,0:19:10.93:11,0,248	0/1:10,0:10:3.28:3,0,120
chr10	92016353	.	CT	C	2959.94	PASS	AB=0.714;AC=44;AF=0.786;AN=56;BaseQRankSum=7.945;DP=548;FS=1.030;HRun=13;HaplotypeScore=69.6596;InbreedingCoeff=0.7062;MQ=63.95;MQ0=10;MQRankSum=-1.549;QD=6.84;ReadPosRankSum=0.877;VQSLOD=2.5490;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,2:40:35.54:0,36,656	1/1:4,6:11:13.95:93,14,0	0/0:16,1:8:13.54:0,14,108	0/0:16,0:7:5.31:0,5,43	1/1:3,0:18:16.28:53,16,0	0/0:19,2:20:18.95:0,19,325	0/1:8,3:11:19.78:20,0,151	1/1:5,1:21:23.95:82,24,0	1/1:3,0:9:12.22:35,12,0	1/1:9,17:26:23.61:323,24,0	0/1:4,5:8:14.27:73,0,14	1/1:7,0:18:14.22:41,14,0	1/1:10,11:23:13.48:173,13,0	1/1:2,9:12:16.91:115,17,0	1/1:3,12:16:25.89:181,26,0	0/0:19,0:20:44.91:0,45,422	1/1:5,24:29:47.21:349,47,0	1/1:1,10:14:37.98:242,38,0	1/1:6,0:20:27.70:79,28,0	1/1:4,1:28:37.56:121,38,0	1/1:1,0:6:4.07:12,4,0	1/1:3,14:18:26.78:197,27,0	1/1:5,15:21:25.82:181,26,0	1/1:9,26:36:16.16:430,16,0	1/1:6,12:17:14.89:109,15,0	1/1:8,0:27:34.77:101,35,0	1/1:6,0:28:30.11:88,30,0	1/1:4,0:11:14.21:41,14,0
chr10	92016779	.	C	CCA	9369.73	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-14.187;DP=754;FS=1.804;HRun=0;HaplotypeScore=95.6335;InbreedingCoeff=0.9944;MQ=79.31;MQ0=0;MQRankSum=-1.767;QD=40.92;ReadPosRankSum=1.155;VQSLOD=6.6594;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:99:0,114,1466	0/0:9,0:9:24.08:0,24,312	0/0:29,0:29:55.58:0,56,704	0/0:12,0:12:23.43:0,23,309	0/0:21,0:21:57.18:0,57,741	0/0:24,0:24:54.17:0,54,699	0/0:37,0:37:90.29:0,90,1171	0/0:28,0:28:72.23:0,72,924	0/0:34,0:33:93.30:0,93,1209	1/1:6,24:30:72.25:1213,72,0	1/1:1,16:18:48.15:812,48,0	0/0:32,0:32:87.28:0,87,1131	1/1:5,24:29:63.05:1070,63,0	1/1:3,30:33:87.30:1479,87,0	0/0:34,0:34:99:0,99,1288	0/0:37,0:37:90.27:0,90,1143	0/0:25,0:25:63.20:0,63,819	1/1:4,19:24:54.18:919,54,0	0/0:19,0:19:42.11:0,42,528	0/0:22,0:22:63.18:0,63,791	0/0:54,0:54:99:0,150,1922	1/1:3,14:17:33.11:561,33,0	1/1:1,18:19:45.15:765,45,0	1/1:7,29:36:84.29:1428,84,0	1/1:0,23:23:66.23:1123,66,0	0/0:34,0:34:78.24:0,78,1001	0/0:21,0:21:63.20:0,63,819	0/0:6,0:6:12.02:0,12,140
chr10	92021195	.	G	GA	3219.64	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=12.279;DP=572;FS=1.868;HRun=9;HaplotypeScore=95.0180;InbreedingCoeff=0.8388;MQ=57.24;MQ0=13;MQRankSum=-5.485;QD=8.13;ReadPosRankSum=-4.278;VQSLOD=1.4143;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:99:0,119,1019	0/0:20,0:19:47.99:0,48,416	0/0:11,0:8:15.41:0,15,121	0/0:11,0:7:1.85:0,2,55	1/1:22,0:26:30.88:194,31,0	0/0:10,0:10:28.81:0,29,239	0/0:12,0:12:35.99:0,36,312	1/1:17,0:21:27.86:160,28,0	1/1:8,0:17:11.86:50,12,0	1/1:18,7:25:13.87:417,14,0	1/1:6,10:18:2.55:198,3,0	1/1:9,0:12:25.54:131,26,0	1/1:9,3:11:3.30:148,3,0	1/1:7,16:22:18.60:225,19,0	0/0:16,0:16:38.98:0,39,338	0/0:22,0:22:56.98:0,57,493	0/0:27,0:27:77.02:0,77,657	1/1:10,17:26:18.32:310,18,0	1/1:19,0:24:15.35:120,15,0	1/1:11,0:12:6.52:37,7,0	1/1:5,0:12:15.70:84,16,0	1/1:11,8:20:28.77:284,29,0	1/1:11,6:17:20.93:221,21,0	1/1:6,14:17:9.29:212,9,0	1/1:7,16:21:3.15:174,3,0	1/1:23,0:30:38.32:234,38,0	1/1:14,1:35:30.78:166,31,0	1/1:3,1:7:8.69:61,9,0
chr10	92021204	.	AG	A	4316.46	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=11.428;DP=594;FS=0.363;HRun=1;HaplotypeScore=92.9055;InbreedingCoeff=0.9755;MQ=60.24;MQ0=9;MQRankSum=-6.976;QD=10.74;ReadPosRankSum=-5.689;VQSLOD=0.5029;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,1:46:99:0,109,1625	0/0:16,0:16:48.16:0,48,629	0/0:16,0:13:25.81:0,26,307	0/0:15,0:9:7.24:0,7,155	1/1:26,4:30:60.78:417,61,0	0/0:13,0:12:19.51:0,20,392	0/0:15,0:15:42.10:0,42,526	1/1:27,3:29:47.99:327,48,0	1/1:17,3:16:19.84:138,20,0	1/1:30,0:29:55.61:412,56,0	1/1:17,0:17:20.86:90,21,0	1/1:16,1:15:35.52:207,36,0	1/1:11,1:11:22:150,22,0	1/1:19,1:19:17.78:106,18,0	0/0:18,0:18:54.12:0,54,647	0/0:25,0:25:72.17:0,72,873	0/0:27,0:27:79.10:0,79,992	1/1:22,0:21:28.99:178,29,0	1/1:26,1:25:53.48:390,53,0	1/1:8,2:9:20.12:151,20,0	1/1:15,0:14:24.61:161,25,0	1/1:24,0:24:47.84:330,48,0	1/1:18,0:18:41.99:280,42,0	1/1:19,0:17:21.86:133,22,0	1/1:24,0:22:28.32:169,28,0	1/1:30,3:32:68.64:414,69,0	1/1:26,2:28:34.52:187,35,0	1/1:5,1:6:11.76:74,12,0
chr10	92021897	.	C	CACT	558.15	PASS	AB=0.874;AC=7;AF=0.167;AN=42;BaseQRankSum=1.075;DP=667;FS=24.628;HRun=0;HaplotypeScore=29.1920;InbreedingCoeff=-0.0297;MQ=23.28;MQ0=284;MQRankSum=-4.691;QD=5.47;ReadPosRankSum=2.805;VQSLOD=0.2633;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:10:21.07:0,21,350	./.	./.	./.	0/0:19,0:1:3.01:0,3,50	0/0:10,0:2:3.01:0,3,50	./.	./.	0/0:52,0:14:24.05:0,24,350	0/1:14,4:6:33.54:209,0,34	0/0:6,1:3:4.24:0,4,27	0/0:37,0:7:12.04:0,12,200	0/1:18,3:10:99:114,0,177	0/1:23,2:12:99:103,0,323	0/0:36,0:4:9.03:0,9,150	0/0:38,0:11:21.06:0,21,322	0/0:16,0:6:15.05:0,15,249	0/0:10,0:7:9.03:0,9,150	0/0:23,0:1:3.01:0,3,50	./.	0/0:61,0:10:17.99:0,18,296	1/1:9,3:2:6.02:135,6,0	0/1:10,1:4:58.67:59,0,90	0/0:22,0:7:8.51:0,9,106	0/1:12,3:7:56.01:56,0,93	0/0:25,0:4:9.03:0,9,150	0/0:33,0:7:12.04:0,12,200	./.
chr10	92021961	.	C	CACT	4875.13	PASS	AB=0.564;AC=17;AF=0.315;AN=54;BaseQRankSum=11.075;DP=829;FS=58.313;HRun=0;HaplotypeScore=67.0795;InbreedingCoeff=0.8176;MQ=37.26;MQ0=220;MQRankSum=2.517;QD=30.28;ReadPosRankSum=0.631;VQSLOD=2.7770;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:28:60.15:0,60,968	0/0:17,0:5:12.04:0,12,200	./.	0/0:21,0:1:3.01:0,3,41	0/0:32,0:11:12.04:0,12,200	0/0:16,0:8:18.06:0,18,300	0/0:34,0:16:36.12:0,36,600	0/0:35,0:10:24.07:0,24,375	0/0:62,0:38:78.25:0,78,1272	1/1:8,9:8:3.09:443,3,0	1/1:0,3:4:9.03:203,9,0	0/0:43,0:27:48.15:0,48,799	1/1:9,18:20:42.14:929,42,0	1/1:3,21:18:39.13:883,39,0	0/0:49,0:30:60.19:0,60,974	0/0:30,0:13:23.91:0,24,396	0/0:28,0:23:51.17:0,51,849	0/1:5,17:14:25.86:451,0,26	0/0:31,0:4:9.02:0,9,126	0/0:32,0:15:42.13:0,42,673	0/0:62,0:31:68.65:0,69,1060	1/1:2,6:6:12.04:272,12,0	1/1:3,6:5:15.05:334,15,0	1/1:5,23:22:36.12:815,36,0	1/1:8,12:11:24.08:543,24,0	0/0:50,0:27:78.26:0,78,1276	0/0:25,0:14:21.07:0,21,349	0/0:20,0:13:24.08:0,24,396
chr10	92022260	.	TC	T	725.22	PASS	AB=1.000;AC=5;AF=0.119;AN=42;BaseQRankSum=-0.953;DP=686;FS=45.141;HRun=3;HaplotypeScore=49.9368;InbreedingCoeff=0.5238;MQ=18.39;MQ0=357;MQRankSum=0.692;QD=10.51;ReadPosRankSum=1.779;VQSLOD=-0.7413;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:4:6.02:0,6,82	0/1:6,0:1:0:0,0,0	./.	./.	0/0:19,0:12:2.81:0,3,42	1/1:3,19:17:12.04:149,12,0	./.	./.	0/0:34,0:24:45.15:0,45,640	0/0:30,0:10:24.07:0,24,321	0/0:16,0:5:3.01:0,3,43	0/0:44,0:31:39:0,39,553	0/0:25,0:22:20.90:0,21,302	0/0:28,0:21:15.05:0,15,215	0/0:29,0:21:15.05:0,15,215	1/1:6,35:28:56.93:685,57,0	./.	0/0:10,0:4:3.01:0,3,43	0/0:26,0:2:6.02:0,6,86	0/0:13,0:2:6.02:0,6,86	./.	0/0:31,0:11:6.02:0,6,86	./.	0/0:18,0:7:8.96:0,9,104	0/0:27,0:10:6.02:0,6,86	0/0:31,0:15:41.31:0,41,536	0/0:20,0:12:21.07:0,21,299	0/0:15,0:4:2.98:0,3,22
chr10	92023495	.	G	GC	6117.92	PASS	AB=0.632;AC=37;AF=0.685;AN=54;BaseQRankSum=9.964;DP=470;FS=2.153;HRun=3;HaplotypeScore=62.0835;InbreedingCoeff=0.7725;MQ=47.36;MQ0=42;MQRankSum=-2.509;QD=20.06;ReadPosRankSum=1.585;VQSLOD=4.4384;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:72.22:0,72,863	./.	0/0:25,0:4:9.03:0,9,108	0/0:26,0:6:12.02:0,12,126	1/1:7,2:5:9.01:103,9,0	0/0:19,0:19:51.15:0,51,608	0/0:33,0:33:87.25:0,87,1030	1/1:7,3:6:12.04:158,12,0	1/1:8,21:23:42.14:552,42,0	0/1:5,7:10:36.66:127,0,37	1/1:5,4:8:4.90:77,5,0	1/1:4,22:23:48.16:632,48,0	1/1:2,23:22:33.11:434,33,0	1/1:4,22:24:42.03:658,42,0	0/0:6,0:1:3.01:0,3,33	0/0:20,0:20:57.16:0,57,672	0/0:4,0:1:3.01:0,3,36	1/1:2,18:18:45.14:594,45,0	1/1:7,5:5:10.43:147,10,0	1/1:2,7:8:18.06:237,18,0	1/1:3,29:27:42.10:533,42,0	1/1:5,6:9:12.04:158,12,0	1/1:3,8:10:20.10:243,20,0	1/1:0,23:23:45.11:576,45,0	1/1:1,10:11:21.07:274,21,0	1/1:5,9:11:24.06:301,24,0	1/1:2,11:11:17.89:233,18,0	1/1:1,2:2:6.02:79,6,0
chr10	92026927	.	CT	C	2835.40	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.812;DP=668;FS=0.454;HRun=1;HaplotypeScore=66.0799;InbreedingCoeff=0.9998;MQ=88.21;MQ0=0;MQRankSum=-1.999;QD=39.38;ReadPosRankSum=2.743;VQSLOD=4.3297;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,148,2346	1/1:0,11:11:33.11:461,33,0	0/0:23,0:23:69.22:0,69,1045	0/0:25,0:25:66.17:0,66,969	0/0:20,0:20:60.20:0,60,954	0/0:23,0:23:66.21:0,66,1032	0/0:19,0:19:57.19:0,57,909	0/0:32,0:32:96.31:0,96,1490	0/0:28,0:28:84.29:0,84,1341	0/0:26,0:26:78.27:0,78,1248	0/0:12,0:12:36.12:0,36,575	0/0:22,0:22:66.23:0,66,1053	0/0:26,0:26:78.27:0,78,1246	0/0:14,0:14:42.14:0,42,671	1/1:0,31:31:93.31:1300,93,0	0/0:18,0:18:51.16:0,51,792	1/1:0,30:30:87.29:1217,87,0	0/0:31,0:31:90.28:0,90,1413	0/0:25,0:25:75.25:0,75,1180	0/0:20,0:20:60.19:0,60,936	0/0:28,0:28:60.36:0,60,1269	0/0:32,0:32:96.31:0,96,1511	0/0:22,0:22:66.23:0,66,1055	0/0:29,0:29:84.29:0,84,1341	0/0:23,0:23:69.24:0,69,1102	0/0:14,0:14:42.14:0,42,672	0/0:21,0:21:60.20:0,60,958	0/0:14,0:14:42.14:0,42,671
chr10	92027738	.	GACGGAACGGCC	G	13259.27	PASS	AB=0.950;AC=21;AF=0.375;AN=56;BaseQRankSum=15.518;DP=546;FS=0.776;HRun=0;HaplotypeScore=183.1769;InbreedingCoeff=0.9044;MQ=83.83;MQ0=0;MQRankSum=-15.067;QD=67.65;ReadPosRankSum=-1.057;VQSLOD=4.5120;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,5605	0/0:3,0:3:9.03:0,9,420	0/0:34,0:34:87.29:0,87,3732	0/0:16,0:16:45.15:0,45,1998	1/1:3,7:10:18.06:580,18,0	0/0:25,0:25:75.21:0,75,3921	0/0:28,0:28:84.29:0,84,4557	1/1:4,20:24:60.18:1906,60,0	1/1:2,23:25:63.22:2246,63,0	0/0:22,0:22:57.13:0,57,2742	0/0:8,0:8:24.07:0,24,1232	1/1:2,19:21:39.13:1358,39,0	0/0:28,0:28:84.29:0,84,4625	0/0:11,0:11:30.10:0,30,1605	0/0:30,0:30:84.29:0,84,4667	0/1:18,1:19:55.87:56,0,2571	0/0:21,0:21:63.22:0,63,3495	0/0:29,0:29:81.26:0,81,4380	1/1:3,8:11:24.07:711,24,0	1/1:2,6:8:12.04:414,12,0	1/1:5,18:23:39.13:1299,39,0	0/0:12,0:12:33.11:0,33,1788	0/0:12,0:12:36.12:0,36,1836	0/0:20,0:20:57.20:0,57,3148	0/0:14,0:14:36.10:0,36,1647	1/1:2,24:26:72.25:2568,72,0	1/1:2,19:21:48.16:1707,48,0	1/1:2,6:8:12.04:415,12,0
chr10	92028794	.	G	GA	3207.82	PASS	AC=22;AF=0.407;AN=54;BaseQRankSum=4.172;DP=470;FS=4.535;HRun=7;HaplotypeScore=69.0760;InbreedingCoeff=0.9575;MQ=54.85;MQ0=42;MQRankSum=-3.338;QD=18.12;ReadPosRankSum=-1.285;VQSLOD=3.2871;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:45.03:0,45,424	0/0:9,0:9:17.99:0,18,166	1/1:28,0:3:2.74:12,3,0	./.	1/1:16,4:19:36.11:430,36,0	0/0:13,0:13:27.03:0,27,259	0/0:10,0:10:21:0,21,190	1/1:11,8:16:38.60:419,39,0	1/1:6,2:8:12.04:144,12,0	0/0:22,0:22:60.09:0,60,575	0/0:12,0:12:29.89:0,30,276	1/1:11,4:15:33.98:394,34,0	0/0:8,0:8:11.95:0,12,116	0/0:17,0:17:42.07:0,42,405	0/0:18,0:18:24.03:0,24,231	0/0:13,0:13:30.05:0,30,289	0/0:38,0:38:75.03:0,75,702	0/0:26,0:26:63.10:0,63,606	1/1:8,7:12:30.09:361,30,0	1/1:14,5:19:33.08:376,33,0	1/1:4,4:8:18.06:217,18,0	0/0:14,0:14:24.02:0,24,225	0/0:11,0:11:24:0,24,215	0/0:8,0:8:18.03:0,18,174	0/0:23,0:23:42.05:0,42,405	1/1:12,4:16:30.06:342,30,0	1/1:14,2:16:33.72:361,34,0	1/1:10,3:13:15.78:367,16,0
chr10	92028809	.	GA	G	3648.58	PASS	AB=0.805;AC=43;AF=0.768;AN=56;BaseQRankSum=3.865;DP=429;FS=7.026;HRun=13;HaplotypeScore=53.8205;InbreedingCoeff=0.3017;MQ=58.02;MQ0=35;MQRankSum=-1.247;QD=9.28;ReadPosRankSum=0.471;VQSLOD=2.3606;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:19:32.21:0,32,341	0/1:1,6:7:11.26:92,0,11	0/1:38,0:8:2.20:2,0,21	0/1:35,0:3:4.85:5,0,8	1/1:14,2:15:9.63:231,10,0	0/1:13,1:14:11.67:12,0,207	0/0:5,0:5:15.02:0,15,146	1/1:11,9:19:3.47:225,3,0	1/1:6,2:8:17.74:122,18,0	1/1:2,17:19:53.68:392,54,0	1/1:4,10:15:39.13:255,39,0	1/1:11,1:12:12.22:147,12,0	1/1:3,3:6:2.78:22,3,0	1/1:7,8:15:14.84:109,15,0	1/1:3,8:11:17.89:130,18,0	0/0:11,1:12:21.03:0,21,204	1/1:8,20:30:51.78:362,52,0	1/1:8,14:22:3.62:190,4,0	1/1:10,7:17:5.67:195,6,0	1/1:10,2:13:2.68:173,3,0	1/1:6,1:7:8.63:54,9,0	0/1:5,4:9:35.41:69,0,35	1/1:3,4:7:5.93:44,6,0	1/1:2,4:6:8.94:66,9,0	1/1:6,16:23:8.62:217,9,0	0/1:7,4:12:0.32:150,0,0	0/1:9,4:13:0.13:163,0,0	1/1:13,3:16:9.43:223,9,0
chr10	92029024	.	AAAACAAAC	A	9226.71	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=7.704;DP=484;FS=1.549;HRun=0;HaplotypeScore=134.2266;InbreedingCoeff=0.5920;MQ=52.09;MQ0=10;MQRankSum=-6.630;QD=24.22;ReadPosRankSum=2.598;VQSLOD=4.4351;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:91.19:0,91,3606	1/1:3,1:4:3.01:76,3,0	./.	0/0:18,0:11:9.03:0,9,365	1/1:4,10:13:18.02:398,18,0	1/1:7,9:16:27.09:681,27,0	1/1:12,10:22:18.06:433,18,0	0/0:20,0:19:0.47:0,0,1	1/1:6,11:17:27.09:681,27,0	1/1:5,0:15:27.09:503,27,0	1/1:8,0:15:9.03:168,9,0	1/1:7,7:14:15.05:378,15,0	1/1:7,0:15:15.05:279,15,0	1/1:5,0:17:30.10:559,30,0	1/1:15,18:33:36.12:908,36,0	1/1:9,13:22:27.09:681,27,0	1/1:23,5:28:21.03:461,21,0	1/1:5,0:8:9.03:168,9,0	1/1:19,2:21:2.98:147,3,0	1/1:5,4:9:9.03:227,9,0	1/1:22,7:29:11.15:301,11,0	1/1:1,0:5:3.01:56,3,0	1/1:3,0:9:15.05:279,15,0	1/1:8,0:14:4.22:109,4,0	1/1:7,0:16:21.07:391,21,0	1/1:11,10:21:30.10:757,30,0	1/1:7,7:15:18.06:434,18,0	1/1:0,2:2:6.02:151,6,0
chr10	92030644	.	G	GCCTGACCTGA	9510.52	PASS	AB=0.733;AC=19;AF=0.339;AN=56;BaseQRankSum=-1.349;DP=573;FS=4.971;HRun=0;HaplotypeScore=192.2787;InbreedingCoeff=0.8876;MQ=86.79;MQ0=1;MQRankSum=-8.994;QD=51.69;ReadPosRankSum=-4.986;VQSLOD=3.4575;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:51.16:0,51,1389	0/0:10,0:10:27.09:0,27,804	0/0:30,0:30:36.02:0,36,769	0/0:36,0:33:32.19:0,32,1185	1/1:4,3:7:6.02:240,6,0	0/0:12,0:12:27.08:0,27,726	0/0:32,0:32:69.24:0,69,1936	1/1:25,0:30:30.09:772,30,0	1/1:11,14:27:54.19:2306,54,0	0/0:19,0:19:39.13:0,39,1182	0/0:19,0:19:45.14:0,45,1246	1/1:16,11:29:51.17:2251,51,0	0/0:29,0:29:69.24:0,69,2103	0/0:26,0:26:54.19:0,54,1579	0/0:23,0:23:51.18:0,51,1505	0/0:21,0:21:54.19:0,54,1609	0/0:30,0:30:63.22:0,63,1853	0/0:22,0:22:51.17:0,51,1462	1/1:9,3:13:24.08:714,24,0	1/1:9,3:12:15.05:556,15,0	1/1:23,5:28:9.03:252,9,0	0/0:12,0:12:23.87:0,24,708	0/0:11,0:11:24.05:0,24,568	0/0:24,0:24:54.19:0,54,1639	0/0:10,0:9:21.07:0,21,616	0/1:7,4:11:60.34:864,0,60	1/1:17,3:20:33.06:1223,33,0	1/1:7,0:7:15.05:333,15,0
chr10	92030700	.	G	GC	21081.28	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-7.728;DP=703;FS=7.644;HRun=2;HaplotypeScore=87.9485;InbreedingCoeff=0.9991;MQ=90.95;MQ0=0;MQRankSum=-7.898;QD=39.78;ReadPosRankSum=3.192;VQSLOD=4.9321;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,1574	1/1:0,8:8:20.79:279,21,0	0/0:32,0:32:86.83:0,87,1042	0/0:29,0:29:71.52:0,72,850	1/1:2,22:24:60.20:862,60,0	0/0:25,0:25:69.22:0,69,855	0/0:25,0:25:69.20:0,69,842	1/1:1,35:36:99:1493,105,0	1/1:3,19:22:57.19:816,57,0	1/1:1,24:25:72.21:1008,72,0	1/1:1,23:24:69.23:993,69,0	1/1:2,22:24:72.17:986,72,0	1/1:2,31:33:90.30:1293,90,0	1/1:0,28:28:84.28:1210,84,0	1/1:2,19:21:60.20:863,60,0	0/0:18,0:18:54.17:0,54,669	1/1:0,29:29:75.25:1080,75,0	1/1:0,23:23:66.22:950,66,0	1/1:2,19:21:57.19:820,57,0	1/1:0,16:16:45.15:647,45,0	1/1:0,35:35:87.28:1240,87,0	1/1:0,14:14:36.12:517,36,0	1/1:3,19:22:60.19:847,60,0	1/1:1,27:28:81.27:1167,81,0	1/1:1,17:18:48.16:691,48,0	1/1:1,37:38:99:1593,111,0	1/1:0,24:24:69.23:992,69,0	1/1:0,17:17:51.17:734,51,0
chr10	92032248	.	AAGACTAAATTAC	A	8755.78	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.081;DP=743;FS=4.638;HRun=0;HaplotypeScore=262.5622;InbreedingCoeff=0.9992;MQ=81.04;MQ0=0;MQRankSum=-14.165;QD=70.05;ReadPosRankSum=0.712;VQSLOD=4.4193;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,141,7592	0/0:9,0:9:27.09:0,27,1420	0/0:22,0:22:54.19:0,54,2844	0/0:21,0:21:53.38:0,53,2438	0/0:28,0:28:78.27:0,78,4475	0/0:23,0:23:69.21:0,69,3600	0/0:14,0:14:36.12:0,36,2126	0/0:36,0:36:93.30:0,93,4883	0/0:29,0:29:84.29:0,84,4971	0/0:29,0:29:84.28:0,84,4590	0/0:13,0:13:39.13:0,39,2251	0/0:22,0:22:60.21:0,60,3474	1/1:3,21:24:48.16:1777,48,0	1/1:5,21:26:51.13:1746,51,0	0/0:31,0:31:84.29:0,84,4874	0/0:35,0:35:99:0,102,5603	0/0:43,0:43:99:0,123,7194	0/0:40,0:39:99:0,114,6465	0/0:23,0:23:60.18:0,60,3118	0/0:24,0:24:66.21:0,66,3751	0/0:49,0:49:99:0,144,8649	1/1:2,16:18:33.07:1130,33,0	1/1:4,15:19:39.13:1383,39,0	1/1:4,12:16:23.54:887,24,0	1/1:4,18:22:51.18:1833,51,0	0/0:34,0:34:99:0,99,5484	0/0:28,0:28:75.24:0,75,4168	0/0:14,0:14:42.14:0,42,2245
chr10	92032971	.	AAACAGGTTCTGGGGTCCCAACAGGTTCTGGGGTCCC	A	9576.23	PASS	AC=32;AF=0.727;AN=44;BaseQRankSum=9.168;DP=466;FS=4.608;HRun=0;HaplotypeScore=396.4224;InbreedingCoeff=0.6969;MQ=83.93;MQ0=0;MQRankSum=-7.740;QD=37.12;ReadPosRankSum=3.833;VQSLOD=1.6030;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:87.28:0,87,10299	1/1:3,2:5:3.01:273,3,0	0/0:27,0:25:24.08:0,24,1493	0/0:30,0:29:30.10:0,30,1731	1/1:7,5:12:8.99:397,9,0	0/0:17,0:17:39.13:0,39,4672	0/0:22,0:22:42.14:0,42,4867	./.	1/1:9,5:14:9.03:819,9,0	./.	1/1:1,1:2:3.01:116,3,0	1/1:17,5:22:12.04:1093,12,0	1/1:14,5:19:15.05:1366,15,0	1/1:19,7:26:9.50:820,10,0	1/1:16,7:23:12.04:1092,12,0	0/0:25,0:25:63.22:0,63,9314	1/1:15,3:18:3.01:273,3,0	1/1:18,5:23:6.02:546,6,0	1/1:18,3:21:6.02:546,6,0	1/1:5,4:9:11.97:588,12,0	1/1:30,6:36:0.44:124,0,0	./.	./.	1/1:6,3:9:6.02:429,6,0	1/1:5,4:9:6.02:546,6,0	./.	1/1:5,5:10:6.49:547,6,0	./.
chr10	92034081	.	CATCT	C	7556.51	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=6.279;DP=622;FS=5.131;HRun=0;HaplotypeScore=121.4403;InbreedingCoeff=0.2010;MQ=64.67;MQ0=5;MQRankSum=1.669;QD=15.98;ReadPosRankSum=7.724;VQSLOD=3.4261;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:80.75:0,81,1194	0/0:10,0:10:20.99:0,21,280	0/0:17,0:6:17.99:0,18,187	0/0:23,0:12:29.96:0,30,273	1/1:3,33:36:78.15:1062,78,0	0/1:36,0:36:99:209,0,180	0/0:15,0:15:32.84:0,33,262	1/1:27,0:27:66.01:615,66,0	1/1:3,13:16:18.06:319,18,0	0/1:27,0:27:99:182,0,203	0/1:27,0:27:99:203,0,166	1/1:5,15:20:33.11:586,33,0	0/1:13,0:13:80.41:80,0,93	0/1:11,0:11:53.50:54,0,106	0/0:21,0:21:39.09:0,39,687	0/1:20,0:20:93.19:228,0,93	0/0:30,0:30:72.04:0,72,916	0/1:27,0:27:99:146,0,218	1/1:11,0:11:26.88:231,27,0	1/1:2,31:32:76.84:957,77,0	1/1:6,14:20:21:336,21,0	0/1:22,0:22:99:167,0,205	0/1:26,0:26:99:228,0,154	0/1:13,0:13:46.07:107,0,46	0/1:20,0:20:99:134,0,157	1/1:3,24:27:69.07:860,69,0	1/1:2,27:29:24.08:427,24,0	1/1:0,12:12:24.08:427,24,0
chr10	92036217	.	T	TC	548.65	PASS	AB=0.829;AC=15;AF=0.268;AN=56;BaseQRankSum=-1.160;DP=421;FS=6.800;HRun=10;HaplotypeScore=76.7063;InbreedingCoeff=0.3357;MQ=64.28;MQ0=6;MQRankSum=-1.449;QD=3.89;ReadPosRankSum=-2.239;VQSLOD=-0.0663;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:28:12.96:0,13,312	0/0:13,0:13:5.51:0,6,17	0/0:11,0:9:0.81:0,1,21	0/1:8,0:8:14.66:15,0,15	0/0:6,0:6:0.45:0,0,1	0/0:12,0:12:11.97:0,12,98	0/0:21,0:23:39.95:0,40,300	1/1:10,5:14:5.81:64,6,0	1/1:11,10:20:0.91:159,1,0	0/0:21,0:20:28.51:0,29,82	0/1:3,0:10:8.18:8,0,12	0/1:4,6:10:0:0,0,0	0/0:11,0:12:8.15:0,8,24	0/0:11,0:10:1.24:0,1,3	0/0:27,0:27:4.04:0,4,12	0/0:21,0:22:40.66:0,41,288	0/0:30,0:30:2.03:0,2,6	0/0:15,0:16:4.07:0,4,12	1/1:9,0:8:8.61:73,9,0	1/1:4,5:9:8.98:84,9,0	0/1:19,13:31:15.61:55,0,16	0/0:1,0:10:15.59:0,16,60	0/0:2,0:7:8.15:0,8,24	0/0:15,0:16:4.07:0,4,12	0/0:11,0:12:6.10:0,6,18	0/1:13,4:17:36.05:52,0,36	1/1:7,3:9:18.04:190,18,0	0/0:1,1:2:2.98:0,3,22
chr10	92036224	.	CCCCTTCCTTCCTTCCTTCCTTCCTTCCTT	C	2764.87	PASS	AB=0.592;AC=18;AF=0.321;AN=56;BaseQRankSum=4.644;DP=409;FS=11.876;HRun=0;HaplotypeScore=210.5396;InbreedingCoeff=0.7219;MQ=57.72;MQ0=14;MQRankSum=1.176;QD=21.77;ReadPosRankSum=3.625;VQSLOD=1.6777;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:63.21:0,63,5860	0/1:4,0:12:49.44:49,0,211	0/0:6,0:4:11.98:0,12,105	0/0:6,0:6:8.97:0,9,77	0/0:6,0:4:4.52:0,5,24	0/0:7,0:7:12.04:0,12,289	0/0:19,0:19:25.06:0,25,1134	0/0:15,0:10:7.36:0,7,83	0/0:24,0:21:35.63:0,36,2258	1/1:1,21:21:44.65:1098,45,0	1/1:9,0:9:17.91:198,18,0	0/0:14,0:14:15.05:0,15,1556	1/1:2,11:13:11.06:359,11,0	1/1:2,11:12:2.99:24,3,0	0/0:5,0:23:6.49:0,6,93	0/0:24,0:24:26.39:0,26,1641	0/0:2,0:25:6.02:0,6,139	0/1:6,15:21:0.24:243,0,0	0/0:10,0:8:14.49:0,14,429	0/0:12,0:12:22.20:0,22,1625	0/0:32,0:30:30.08:0,30,2017	1/1:10,0:10:26.97:293,27,0	1/1:5,0:5:12:104,12,0	1/1:1,11:12:5.05:232,5,0	1/1:2,8:10:9.01:354,9,0	0/0:13,0:12:21.39:0,21,1269	0/0:11,0:10:23.06:0,23,193	0/0:9,0:8:22.61:0,23,2075
chr10	92036225	.	CCCTTCCTTCCTT	C	1174.76	PASS	AC=22;AF=0.579;AN=38;BaseQRankSum=3.930;DP=403;FS=7.200;HRun=0;HaplotypeScore=120.6339;InbreedingCoeff=0.6070;MQ=55.80;MQ0=15;MQRankSum=-4.502;QD=6.22;ReadPosRankSum=4.458;VQSLOD=1.5409;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:42.12:0,42,2047	1/1:12,0:12:6.02:128,6,0	./.	./.	./.	1/1:6,1:7:3.01:76,3,0	1/1:19,0:19:2:86,2,0	./.	0/0:22,0:20:18.06:0,18,657	1/1:21,0:21:4.59:165,5,0	./.	0/0:12,0:13:15.05:0,15,573	1/1:13,0:13:3.01:84,3,0	./.	1/1:24,0:23:5.57:140,6,0	1/1:17,7:24:9.03:306,9,0	1/1:26,0:26:2.80:83,3,0	1/1:21,0:21:3.01:84,3,0	0/0:10,0:8:3.01:0,3,139	0/0:10,0:11:15.02:0,15,574	0/0:29,0:27:16.83:0,17,552	./.	./.	1/1:12,0:12:3.01:84,3,0	1/1:10,0:10:3.01:84,3,0	0/0:13,0:12:9.03:0,9,423	./.	0/0:10,0:9:21.07:0,21,918
chr10	92036670	.	C	CAGTAAAGGTG	57382.10	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-4.926;DP=677;FS=22.828;HRun=0;HaplotypeScore=212.8853;InbreedingCoeff=0.9848;MQ=80.88;MQ0=0;MQRankSum=-18.486;QD=117.59;ReadPosRankSum=-1.301;VQSLOD=3.2407;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,129,3995	1/1:3,7:11:27.09:1303,27,0	0/0:30,0:30:72.22:0,72,1928	0/0:24,0:24:69.19:0,69,2028	1/1:11,14:28:66.23:2766,66,0	0/0:21,0:21:63.22:0,63,2102	0/0:28,0:28:81.26:0,81,2557	1/1:19,6:26:72.23:3002,72,0	1/1:9,17:30:72.25:3702,72,0	1/1:10,5:17:48.12:2143,48,0	1/1:10,8:18:45.15:1857,45,0	1/1:6,26:37:96.33:4774,96,0	1/1:9,9:18:54.15:2302,54,0	1/1:4,11:16:42.10:2111,42,0	1/1:14,30:49:99:6220,126,0	0/0:39,0:39:99:0,114,3677	1/1:11,7:19:42.14:2148,42,0	1/1:0,4:4:9.03:480,9,0	1/1:11,5:17:42.14:1832,42,0	1/1:8,11:22:57.20:2470,57,0	1/1:8,8:22:33.06:1275,33,0	1/1:11,11:23:66.23:2601,66,0	1/1:8,6:15:36.12:1440,36,0	1/1:11,6:17:42.14:1913,42,0	1/1:11,11:23:63.22:2714,63,0	1/1:9,24:36:99:5198,108,0	1/1:6,22:33:84.29:4448,84,0	1/1:2,3:6:15.05:684,15,0
chr10	92037563	.	TATCC	T	22208.79	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=12.603;DP=748;FS=7.881;HRun=0;HaplotypeScore=136.5795;InbreedingCoeff=0.9999;MQ=79.17;MQ0=1;MQRankSum=-7.949;QD=45.32;ReadPosRankSum=4.056;VQSLOD=5.0633;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,129,3264	0/0:17,0:17:48.15:0,48,1225	0/0:17,0:17:48.15:0,48,1144	0/0:22,0:22:60.18:0,60,1405	1/1:1,19:20:45.07:795,45,0	0/0:18,0:18:51.18:0,51,1359	0/0:28,0:28:75.24:0,75,1911	1/1:1,21:22:60.19:1085,60,0	1/1:2,29:31:78.18:1415,78,0	1/1:2,35:37:99:1736,99,0	1/1:1,15:16:36.12:671,36,0	1/1:2,24:26:69.17:1247,69,0	1/1:0,21:21:60.21:1118,60,0	1/1:2,34:36:93.32:1729,93,0	0/0:33,0:32:93.29:0,93,2321	0/0:40,0:40:99:0,114,2973	0/0:35,0:35:96.29:0,96,2445	1/1:0,24:24:54.19:1007,54,0	1/1:5,17:22:51.10:877,51,0	1/1:2,19:21:51.09:911,51,0	1/1:1,39:40:90.27:1679,90,0	1/1:0,24:24:63.13:1134,63,0	1/1:0,18:18:36.12:671,36,0	1/1:0,32:31:72.25:1343,72,0	1/1:1,18:19:39.13:728,39,0	1/1:0,33:33:96.22:1713,96,0	1/1:3,27:30:72.25:1343,72,0	1/1:0,18:18:54.19:1007,54,0
chr10	92037732	.	T	TCA	12202.33	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-3.534;DP=771;FS=2.076;HRun=0;HaplotypeScore=112.4878;InbreedingCoeff=0.9888;MQ=79.40;MQ0=0;MQRankSum=0.113;QD=52.60;ReadPosRankSum=4.135;VQSLOD=5.5995;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,2153	0/0:7,0:7:21.07:0,21,340	0/0:17,0:17:17.41:0,17,578	0/0:28,0:28:76.68:0,77,1151	0/0:35,0:35:99:0,102,1588	0/0:16,0:16:45.15:0,45,734	0/0:31,0:31:90.28:0,90,1415	0/0:31,0:31:93.28:0,93,1464	0/0:24,0:24:69.22:0,69,1097	1/1:0,20:22:66.20:1247,66,0	1/1:0,13:14:36.12:731,36,0	0/0:26,0:26:78.23:0,78,1197	1/1:0,27:27:66.23:1340,66,0	1/1:0,33:34:93.32:1887,93,0	0/0:37,0:37:99:0,102,1664	0/0:36,0:36:99:0,105,1685	0/0:31,0:31:93.29:0,93,1490	1/1:0,25:25:66.23:1341,66,0	0/0:23,0:23:66.23:0,66,1074	0/0:24,0:24:72.25:0,72,1166	0/0:71,0:71:99:0,211,3361	1/1:0,27:27:75.26:1523,75,0	1/1:0,21:23:57.20:1147,57,0	1/1:0,30:31:87.30:1768,87,0	1/1:1,25:28:60.21:1219,60,0	0/0:30,0:30:90.31:0,90,1466	0/0:25,0:25:75.22:0,75,1170	0/0:3,0:3:9.03:0,9,147
chr10	92037950	.	GA	G	7280.27	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=5.109;DP=525;FS=7.328;HRun=11;HaplotypeScore=61.7793;InbreedingCoeff=0.9387;MQ=77.57;MQ0=0;MQRankSum=-2.152;QD=18.20;ReadPosRankSum=1.865;VQSLOD=6.0108;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,99,1017	1/1:1,10:11:26.97:222,27,0	0/0:17,0:17:14.65:0,15,118	0/0:13,1:15:4.94:0,5,207	1/1:1,13:15:40.98:326,41,0	0/0:21,0:21:45.06:0,45,455	0/0:13,0:13:33.05:0,33,336	1/1:1,18:19:53.91:437,54,0	1/1:5,11:17:32.40:259,32,0	1/1:2,16:18:44.88:360,45,0	1/1:1,7:8:11.95:98,12,0	1/1:2,25:27:68.92:567,69,0	1/1:6,13:19:35.95:295,36,0	1/1:5,22:27:47.93:394,48,0	1/1:6,25:30:71.89:589,72,0	0/0:18,1:20:23.28:0,23,422	1/1:3,19:22:53.93:443,54,0	1/1:4,12:16:32.95:271,33,0	1/1:1,12:13:6.89:252,7,0	1/1:2,14:16:38.94:320,39,0	1/1:4,11:15:26.93:222,27,0	1/1:4,14:18:41.85:332,42,0	1/1:3,16:19:44.93:369,45,0	1/1:4,14:18:26.96:222,27,0	1/1:5,15:20:40.74:342,41,0	1/1:5,22:27:62.87:517,63,0	1/1:4,15:19:41.92:345,42,0	1/1:0,5:5:11.99:99,12,0
chr10	92038198	.	CT	C	1198.24	PASS	AB=0.800;AC=7;AF=0.125;AN=56;BaseQRankSum=8.960;DP=717;FS=0.000;HRun=10;HaplotypeScore=74.1841;InbreedingCoeff=0.7809;MQ=74.12;MQ0=0;MQRankSum=-2.509;QD=16.64;ReadPosRankSum=0.962;VQSLOD=4.0225;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,108,1155	1/1:1,6:7:17.99:156,18,0	0/0:26,0:25:22.30:0,22,362	0/0:22,0:21:7.24:0,7,310	0/0:26,0:26:71:0,71,768	0/0:24,0:24:63.17:0,63,697	0/0:20,2:22:5.04:0,5,512	0/0:41,0:41:93.24:0,93,1021	0/0:33,0:33:87.23:0,87,954	0/0:29,0:29:57.15:0,57,624	0/0:27,0:27:63.16:0,63,688	0/0:24,1:25:48.73:0,49,726	0/0:15,0:15:42.11:0,42,464	0/0:24,0:24:66.14:0,66,716	1/1:3,21:24:53.98:469,54,0	0/0:23,0:23:66.15:0,66,713	1/1:3,34:37:80.97:703,81,0	0/0:26,0:26:71.87:0,72,774	0/0:24,0:24:25.05:0,25,479	0/0:28,0:28:81.19:0,81,872	0/0:29,0:29:75.20:0,75,829	0/0:17,0:17:51.14:0,51,562	0/0:17,0:17:42.11:0,42,464	0/0:39,0:39:64.59:0,65,1055	0/0:20,0:20:54.15:0,54,597	0/0:35,2:37:35.04:0,35,805	0/0:25,0:25:59.99:0,60,620	0/1:3,1:4:17.05:17,0,48
chr10	92038772	.	TAGAA	T	15907.59	PASS	AB=0.531;AC=25;AF=0.446;AN=56;BaseQRankSum=13.888;DP=737;FS=6.763;HRun=0;HaplotypeScore=139.2482;InbreedingCoeff=0.9266;MQ=83.51;MQ0=0;MQRankSum=-4.725;QD=48.35;ReadPosRankSum=3.288;VQSLOD=5.4610;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,3370	1/1:0,9:9:24.08:456,24,0	0/0:32,0:32:90.26:0,90,2163	0/0:25,0:25:69.24:0,69,1661	1/1:0,36:36:99:1708,99,0	0/0:22,0:22:60.21:0,60,1613	0/0:24,0:24:66.21:0,66,1724	1/1:1,30:31:90.29:1618,90,0	1/1:1,26:27:69.24:1309,69,0	0/0:39,0:39:99:0,117,3100	0/0:17,0:17:48.16:0,48,1295	1/1:0,28:28:75.25:1394,75,0	0/0:28,0:28:75.26:0,75,2007	0/0:28,0:28:84.29:0,84,2268	1/1:1,18:19:45.15:852,45,0	0/0:28,0:28:78.27:0,78,2039	1/1:0,18:18:39.13:740,39,0	0/0:26,1:27:24.32:0,24,1983	1/1:4,18:22:57.19:1042,57,0	1/1:1,32:33:87.30:1607,87,0	1/1:2,44:46:99:2164,114,0	0/0:21,0:21:60.21:0,60,1617	0/0:29,0:29:78.22:0,78,2002	0/0:22,0:22:57.20:0,57,1539	0/0:24,0:24:72.25:0,72,1892	0/1:3,23:26:86.82:1197,0,87	1/1:0,27:27:75.26:1423,75,0	1/1:0,7:7:21.07:399,21,0
chr10	92038879	.	AG	A	11279.30	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=18.337;DP=782;FS=0.271;HRun=1;HaplotypeScore=152.4531;InbreedingCoeff=0.9987;MQ=87.73;MQ0=0;MQRankSum=-4.275;QD=39.03;ReadPosRankSum=5.534;VQSLOD=4.1037;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:65:99:0,196,3086	1/1:0,9:9:27.09:378,27,0	0/0:26,0:26:75.15:0,75,1122	0/0:28,0:28:77.60:0,78,1109	0/0:27,0:27:81.26:0,81,1266	0/0:31,0:31:87.28:0,87,1363	0/0:27,0:27:81.26:0,81,1266	0/0:35,0:35:99:0,105,1646	0/0:27,0:27:78.27:0,78,1247	1/1:0,23:23:69.23:965,69,0	1/1:0,23:23:63.21:881,63,0	0/0:30,0:30:87.30:0,87,1386	1/1:0,21:21:60.20:839,60,0	1/1:0,28:28:69.23:965,69,0	1/1:0,29:29:87.29:1217,87,0	0/0:33,0:33:96.33:0,96,1520	1/1:0,29:29:81.27:1133,81,0	1/1:1,23:24:21.26:875,21,0	0/0:20,0:20:60.20:0,60,938	0/0:24,0:24:72.24:0,72,1132	0/0:47,0:47:99:0,141,2215	1/1:0,26:26:72.24:1007,72,0	1/1:0,21:21:57.17:797,57,0	1/1:0,37:37:99:1427,102,0	1/1:0,19:19:57.19:797,57,0	0/0:24,1:25:33.28:0,33,1110	0/0:41,0:40:99:0,120,1907	0/0:7,0:7:21.07:0,21,336
chr10	92039501	.	T	TG	7260.74	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-10.762;DP=585;FS=2.935;HRun=1;HaplotypeScore=80.7077;InbreedingCoeff=0.9996;MQ=84.18;MQ0=0;MQRankSum=-1.044;QD=42.96;ReadPosRankSum=3.694;VQSLOD=5.1430;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.29:0,90,1168	0/0:8,0:8:24.08:0,24,312	0/0:22,0:22:63.16:0,63,767	0/0:16,0:16:34.04:0,34,459	0/0:23,0:23:57.18:0,57,741	0/0:21,0:21:57.17:0,57,725	0/0:23,0:23:63.19:0,63,796	0/0:44,0:44:99:0,123,1578	0/0:19,0:19:45.13:0,45,570	1/1:0,21:21:63.21:938,63,0	1/1:1,20:21:60.20:899,60,0	0/0:28,0:28:66.20:0,66,843	1/1:0,13:13:36.12:539,36,0	1/1:0,13:13:39.13:572,39,0	0/0:16,0:16:42.14:0,42,545	0/0:17,0:17:48.16:0,48,620	0/0:25,0:25:63.20:0,63,817	1/1:0,28:28:78.26:1169,78,0	0/0:20,0:20:57.18:0,57,742	0/0:16,0:16:48.14:0,48,608	0/0:23,0:23:54.18:0,54,701	1/1:1,24:25:72.24:1077,72,0	1/1:0,13:13:36.12:540,36,0	1/1:0,14:14:39.13:582,39,0	1/1:0,21:21:63.21:944,63,0	0/0:22,0:22:60.18:0,60,761	0/0:25,0:25:48.14:0,48,598	0/0:16,0:16:36.12:0,36,466
chr10	92039547	.	C	CTT	4263.67	PASS	AB=0.928;AC=29;AF=0.518;AN=56;BaseQRankSum=3.506;DP=622;FS=5.412;HRun=14;HaplotypeScore=137.0765;InbreedingCoeff=0.6889;MQ=72.92;MQ0=12;MQRankSum=-4.667;QD=13.37;ReadPosRankSum=0.980;VQSLOD=3.1807;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:36:46.82:0,47,450	1/1:2,7:10:11.99:137,12,0	0/0:56,0:24:11.08:0,11,159	0/0:45,0:25:1.09:0,1,88	1/1:23,0:23:50.72:416,51,0	0/0:24,0:27:32.31:0,32,346	0/0:22,0:22:47.54:0,48,385	1/1:26,0:26:38.74:317,39,0	1/1:14,0:15:33:299,33,0	0/0:21,0:21:1.12:0,1,90	0/0:17,0:17:0.76:0,1,99	1/1:17,0:17:22.54:185,23,0	0/0:9,0:9:16.71:0,17,89	0/0:14,0:14:25.16:0,25,131	1/1:10,9:20:18.34:186,18,0	0/0:12,0:13:31.84:0,32,239	1/1:27,10:38:65.94:777,66,0	0/0:19,0:19:16.67:0,17,120	1/1:23,0:21:32.10:219,32,0	1/1:21,0:21:53.75:438,54,0	1/1:14,0:14:29.93:243,30,0	0/1:17,0:19:24.59:39,0,25	0/1:18,0:19:36.67:37,0,79	0/1:12,0:13:5.69:6,0,70	0/0:22,0:22:39.39:0,39,176	1/1:19,0:19:32.35:315,32,0	1/1:31,0:31:60.52:496,61,0	1/1:11,0:11:17.94:153,18,0
chr10	92039550	.	T	TTC	6411.72	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-3.410;DP=636;FS=10.491;HRun=0;HaplotypeScore=130.8227;InbreedingCoeff=0.7621;MQ=73.48;MQ0=12;MQRankSum=-0.788;QD=24.10;ReadPosRankSum=4.609;VQSLOD=5.2249;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:95.91:0,96,1175	0/1:10,0:10:28.40:28,0,32	0/0:64,0:28:28.12:0,28,437	0/0:53,0:27:6.02:0,6,276	1/1:1,22:23:59.85:804,60,0	0/0:27,0:27:71.62:0,72,861	0/0:21,0:21:60.09:0,60,813	1/1:4,19:23:62.30:762,62,0	1/1:1,14:16:33.11:522,33,0	0/0:22,0:22:53.56:0,54,621	0/0:16,0:16:40.34:0,40,479	1/1:2,14:17:23.84:346,24,0	0/0:9,0:9:27.02:0,27,314	0/0:15,0:15:44.97:0,45,499	0/1:19,0:19:20.28:20,0,148	0/0:14,0:14:39.09:0,39,519	0/1:37,0:37:99:153,0,200	0/0:18,0:18:53.82:0,54,584	1/1:8,16:22:51.93:576,52,0	1/1:1,19:20:60.02:813,60,0	1/1:0,15:15:30.10:463,30,0	0/0:18,0:18:33.45:0,33,400	0/0:20,0:20:51.09:0,51,523	0/0:13,0:13:31.93:0,32,361	0/0:23,0:23:69.15:0,69,857	1/1:4,15:21:16.15:665,16,0	1/1:8,24:32:68.51:959,69,0	1/1:1,8:9:20.94:299,21,0
chr10	92039561	.	TA	T	3881.43	PASS	AB=0.983;AC=39;AF=0.696;AN=56;BaseQRankSum=2.227;DP=625;FS=7.264;HRun=4;HaplotypeScore=124.1303;InbreedingCoeff=0.6174;MQ=74.79;MQ0=13;MQRankSum=-0.211;QD=9.80;ReadPosRankSum=-0.281;VQSLOD=0.6063;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:75.12:0,75,822	1/1:11,0:11:22.18:153,22,0	0/0:71,0:35:54.10:0,54,415	0/0:63,0:33:23.25:0,23,244	1/1:19,2:21:47.12:239,47,0	0/0:29,0:29:72.11:0,72,791	0/0:20,0:20:49.68:0,50,577	1/1:26,0:26:60.40:432,60,0	1/1:15,0:15:34.93:171,35,0	1/1:23,0:23:31.32:238,31,0	0/1:10,1:11:22.05:71,0,22	1/1:13,0:13:22.28:118,22,0	0/1:6,0:6:3.68:4,0,31	0/1:13,0:13:10.90:44,0,11	1/1:11,0:13:14.79:68,15,0	0/0:13,0:13:37.29:0,37,394	1/1:31,0:33:41.39:290,41,0	0/1:18,0:18:9.32:49,0,9	1/1:18,0:16:37.40:235,37,0	1/1:18,2:20:46.60:237,47,0	1/1:14,0:14:27.70:139,28,0	1/1:17,1:18:27.92:257,28,0	1/1:22,0:22:13.37:151,13,0	0/1:13,0:13:12.52:16,0,13	1/1:26,0:26:18.04:171,18,0	1/1:21,0:21:40.96:242,41,0	1/1:31,0:31:81.33:444,81,0	1/1:10,0:10:22.08:113,22,0
chr10	92040354	.	A	AT	8228.90	PASS	AC=42;AF=0.840;AN=50;BaseQRankSum=2.759;DP=401;FS=6.277;HRun=1;HaplotypeScore=57.1463;InbreedingCoeff=0.9487;MQ=44.38;MQ0=48;MQRankSum=-1.441;QD=25.64;ReadPosRankSum=-0.322;VQSLOD=4.2392;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:15:31.83:0,32,405	1/1:2,6:6:18.03:247,18,0	./.	./.	1/1:1,0:15:29.98:273,30,0	0/0:25,0:24:69.14:0,69,860	0/0:14,0:11:27.09:0,27,349	1/1:14,0:25:62.82:522,63,0	1/1:1,0:13:36:327,36,0	1/1:3,20:23:66.19:955,66,0	1/1:0,7:7:18.06:269,18,0	1/1:2,0:14:38.78:341,39,0	1/1:2,12:14:33.11:492,33,0	1/1:2,13:14:33.11:489,33,0	1/1:0,13:12:30.10:449,30,0	0/0:13,0:13:36.11:0,36,454	1/1:10,17:17:42.14:621,42,0	1/1:6,19:18:12.21:632,12,0	1/1:2,0:13:29.86:234,30,0	1/1:0,0:8:24.02:240,24,0	./.	1/1:1,8:9:24.04:334,24,0	1/1:2,7:9:15.05:224,15,0	1/1:4,3:5:9.03:134,9,0	1/1:5,11:16:36.11:519,36,0	1/1:1,0:13:38.80:305,39,0	1/1:1,0:21:60:551,60,0	1/1:2,0:3:8.97:71,9,0
chr10	92040428	.	C	CT	4440.15	PASS	AC=18;AF=0.360;AN=50;BaseQRankSum=-2.051;DP=439;FS=47.813;HRun=0;HaplotypeScore=52.1742;InbreedingCoeff=0.9217;MQ=30.50;MQ0=109;MQRankSum=-2.560;QD=28.65;ReadPosRankSum=3.877;VQSLOD=2.0388;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:25:63.21:0,63,875	0/0:3,0:1:3.01:0,3,39	./.	./.	0/0:17,0:16:27.09:0,27,376	0/0:27,0:23:60.20:0,60,837	0/0:21,0:18:48.16:0,48,669	0/0:15,0:9:24.04:0,24,310	0/0:11,0:8:12.04:0,12,167	1/1:0,12:11:36.12:574,36,0	1/1:2,20:21:45.15:716,45,0	0/0:8,0:6:18.06:0,18,251	1/1:4,18:20:42.14:669,42,0	1/1:2,8:8:18.06:286,18,0	0/0:6,0:6:12.04:0,12,155	0/0:16,0:16:42.14:0,42,583	0/0:36,0:12:24.08:0,24,310	1/1:15,14:13:30.10:475,30,0	0/0:9,0:6:18.03:0,18,231	0/0:16,0:16:39.13:0,39,544	./.	1/1:0,12:12:30.10:477,30,0	1/1:1,13:13:27.09:430,27,0	1/1:9,6:5:6.02:95,6,0	1/1:1,18:18:45.15:717,45,0	0/0:19,0:16:48.16:0,48,670	0/0:14,0:13:39.13:0,39,544	0/0:4,0:2:6.02:0,6,84
chr10	92040523	.	T	TC	101.15	PASS	AB=0.807;AC=3;AF=0.056;AN=54;BaseQRankSum=4.491;DP=367;FS=15.127;HRun=0;HaplotypeScore=56.6650;InbreedingCoeff=-0.0605;MQ=49.96;MQ0=1;MQRankSum=-2.974;QD=3.61;ReadPosRankSum=-2.187;VQSLOD=0.7404;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.25:0,75,1042	0/0:6,0:6:18.06:0,18,250	0/0:21,0:13:29.03:0,29,338	0/0:21,0:15:21.54:0,22,433	0/0:12,0:12:15.05:0,15,206	0/0:14,0:14:39.12:0,39,525	0/0:21,0:21:60.09:0,60,773	0/0:7,0:7:18.05:0,18,224	0/0:5,0:5:6:0,6,67	0/0:14,0:14:42.13:0,42,564	0/0:15,0:15:45.09:0,45,588	0/0:9,0:9:15.03:0,15,208	0/0:20,0:20:42.14:0,42,585	0/0:13,0:13:30.10:0,30,417	0/0:9,0:9:24.08:0,24,333	0/0:16,0:16:42.13:0,42,586	0/0:12,0:12:29.97:0,30,354	0/0:25,0:25:69.08:0,69,877	0/0:10,0:10:27.09:0,27,376	0/1:7,1:8:25.74:26,0,164	0/1:2,4:5:26.80:162,0,27	0/0:6,0:6:18.02:0,18,229	0/0:11,0:11:23.99:0,24,306	0/0:12,0:12:24.08:0,24,334	0/0:19,0:19:48.09:0,48,646	0/0:16,0:16:36.11:0,36,483	0/1:13,1:14:6.54:7,0,436	./.
chr10	92040604	.	A	AGC	550.06	PASS	AB=0.769;AC=18;AF=0.321;AN=56;BaseQRankSum=3.317;DP=304;FS=0.000;HRun=0;HaplotypeScore=57.7041;InbreedingCoeff=-0.0753;MQ=91.25;MQ0=1;MQRankSum=-3.121;QD=4.20;ReadPosRankSum=3.926;VQSLOD=1.7963;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.10:0,57,818	0/1:3,0:4:15.27:37,0,15	0/0:25,0:19:5.91:0,6,353	0/0:15,0:14:6.48:0,6,376	0/1:3,0:12:10.98:43,0,11	0/1:16,0:17:12.93:40,0,13	0/0:16,0:17:11.76:0,12,146	0/0:2,0:2:3:0,3,25	0/1:1,0:4:0.01:0,0,0	0/0:9,0:9:14.97:0,15,76	0/1:3,0:8:41.16:45,0,41	1/1:0,1:6:2.80:13,3,0	0/0:2,0:18:10.02:0,10,55	0/1:2,0:10:12.95:25,0,13	1/1:6,0:6:10.76:75,11,0	0/1:9,0:9:15.13:23,0,15	0/1:16,0:22:56.68:239,0,57	0/0:4,0:18:24.44:0,24,111	0/1:4,0:5:17.91:22,0,18	0/0:4,0:4:2.18:0,2,24	0/1:5,0:11:9.79:50,0,10	0/0:3,0:8:5.91:0,6,32	0/0:0,0:6:4.73:0,5,14	0/0:2,0:15:11.21:0,11,35	0/0:3,0:15:1.94:0,2,55	0/1:2,0:2:3.55:4,0,19	0/1:10,0:11:19.14:74,0,19	1/1:1,0:1:2.37:8,2,0
chr10	92040612	.	C	CCT	2453.16	PASS	AB=0.987;AC=44;AF=0.786;AN=56;BaseQRankSum=0.207;DP=345;FS=2.820;HRun=0;HaplotypeScore=64.0358;InbreedingCoeff=0.1885;MQ=86.91;MQ0=1;MQRankSum=-4.678;QD=8.70;ReadPosRankSum=1.550;VQSLOD=3.3368;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:62.38:0,62,552	1/1:1,0:4:8.64:65,9,0	0/0:24,0:19:2.36:0,2,154	0/0:13,0:12:17.49:0,17,154	1/1:14,0:13:10.34:77,10,0	1/1:2,15:20:12.04:198,12,0	1/1:1,14:16:11.72:142,12,0	1/1:1,1:3:8.89:59,9,0	1/1:6,0:6:8.69:62,9,0	0/1:11,0:11:59.55:60,0,67	0/1:11,1:12:45:57,0,45	1/1:4,0:4:5.92:38,6,0	0/1:17,0:17:10.63:14,0,11	0/1:16,0:15:29.33:40,0,29	1/1:8,0:9:17.93:157,18,0	1/1:1,9:12:6.02:103,6,0	1/1:21,0:23:56.84:497,57,0	0/1:20,0:20:31.21:53,0,31	1/1:2,0:8:14.85:114,15,0	1/1:1,0:5:3.85:21,4,0	1/1:10,1:12:17.75:185,18,0	1/1:7,0:7:1.53:32,2,0	1/1:8,0:8:5.29:46,5,0	1/1:15,0:16:19.76:136,20,0	0/1:16,0:16:17.73:52,0,18	1/1:1,5:6:11.97:126,12,0	1/1:11,0:12:26.70:205,27,0	1/1:4,0:4:8.98:76,9,0
chr10	92040758	.	A	ACCTC	10297.69	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=7.283;DP=533;FS=41.607;HRun=0;HaplotypeScore=119.9420;InbreedingCoeff=0.9704;MQ=83.71;MQ0=0;MQRankSum=-14.466;QD=58.51;ReadPosRankSum=-4.071;VQSLOD=3.1213;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,126,2334	1/1:1,2:3:6.02:160,6,0	0/0:27,0:27:70.07:0,70,1172	0/0:15,0:15:41.25:0,41,706	1/1:3,8:11:24.02:594,24,0	0/0:22,0:22:60.21:0,60,1120	0/0:21,0:21:51.17:0,51,946	1/1:13,11:24:54.19:1373,54,0	1/1:4,9:13:39.09:921,39,0	0/0:22,0:22:66.23:0,66,1232	0/0:17,0:17:45.15:0,45,822	1/1:2,13:15:39.43:1071,39,0	0/0:17,0:17:51.17:0,51,952	0/0:25,0:24:69.22:0,69,1249	1/1:6,13:18:42.09:992,42,0	0/0:23,0:23:66.23:0,66,1232	1/1:6,14:20:42.44:1141,42,0	0/0:25,0:25:69.22:0,69,1230	1/1:5,8:13:26.87:641,27,0	1/1:3,10:13:30.05:773,30,0	1/1:5,8:13:23.98:552,24,0	0/0:25,0:25:63.22:0,63,1176	0/0:23,0:23:63.22:0,63,1175	0/0:33,0:33:84.27:0,84,1537	0/0:16,0:16:42.14:0,42,765	1/1:1,11:12:36.12:959,36,0	1/1:5,11:17:39.09:962,39,0	1/1:1,2:3:6.02:160,6,0
chr10	92040772	.	G	GTTTTA	13159.10	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=7.669;DP=544;FS=14.269;HRun=0;HaplotypeScore=128.5260;InbreedingCoeff=0.9066;MQ=77.66;MQ0=0;MQRankSum=-14.911;QD=61.78;ReadPosRankSum=-5.487;VQSLOD=3.4443;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,2520	1/1:1,2:3:9.03:243,9,0	0/1:20,0:21:19.33:19,0,882	0/0:18,0:18:44.57:0,45,836	1/1:7,10:17:39.13:1060,39,0	0/0:24,0:24:69.24:0,69,1434	0/0:21,0:21:60.21:0,60,1241	1/1:6,14:22:60.18:1606,60,0	1/1:4,10:17:36.12:990,36,0	0/0:21,0:21:60.21:0,60,1259	0/0:19,0:19:54.19:0,54,1117	1/1:4,13:17:48.16:1370,48,0	0/0:14,0:14:42.14:0,42,882	0/0:30,0:29:84.26:0,84,1639	1/1:7,12:18:48.16:1360,48,0	0/0:24,0:24:69.24:0,69,1448	1/1:10,13:23:57.17:1648,57,0	0/0:22,0:22:66.23:0,66,1371	1/1:4,7:12:30.05:778,30,0	1/1:2,11:15:33.11:998,33,0	1/1:6,8:15:30.10:865,30,0	0/0:25,0:25:66.23:0,66,1384	0/0:21,0:21:54.19:0,54,1131	0/0:34,0:34:96.29:0,96,1937	0/0:16,0:16:42.14:0,42,881	1/1:7,7:14:30.10:886,30,0	1/1:3,13:16:42.10:1223,42,0	1/1:2,0:2:5.98:113,6,0
chr10	92041229	.	GAA	G	1227.61	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-2.488;DP=515;FS=20.414;HRun=17;HaplotypeScore=73.6692;InbreedingCoeff=0.8745;MQ=53.49;MQ0=23;MQRankSum=3.893;QD=7.31;ReadPosRankSum=4.039;VQSLOD=-0.6467;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:62.06:0,62,613	0/0:1,0:5:9.01:0,9,85	0/0:13,0:5:9.80:0,10,55	0/0:13,0:5:8.37:0,8,84	0/0:8,0:19:32.92:0,33,312	0/0:20,0:22:38.98:0,39,357	0/0:16,0:18:29.48:0,29,214	0/0:29,0:27:46.64:0,47,453	0/0:2,0:8:3:0,3,29	1/1:8,11:20:20.37:242,20,0	1/1:11,10:24:29.44:226,29,0	0/0:12,0:12:18.79:0,19,144	1/1:14,1:15:11.07:76,11,0	1/1:7,9:15:8.27:56,8,0	0/0:10,0:22:18.04:0,18,193	0/0:24,0:24:50.41:0,50,492	0/0:12,0:26:29.45:0,29,248	1/1:23,2:26:8.36:142,8,0	0/0:19,0:14:25.39:0,25,261	0/0:15,0:13:19.41:0,19,196	0/0:6,0:5:4.35:0,4,28	1/1:6,6:12:17.79:140,18,0	1/1:6,7:13:7.86:53,8,0	1/1:17,5:22:37.70:273,38,0	1/1:14,4:19:28.17:222,28,0	0/0:22,0:20:26.76:0,27,194	0/0:5,0:15:10.82:0,11,86	0/0:21,0:19:36.71:0,37,253
chr10	92041506	.	A	AT	6606.26	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-11.559;DP=620;FS=7.956;HRun=1;HaplotypeScore=67.9671;InbreedingCoeff=0.9945;MQ=84.75;MQ0=1;MQRankSum=-1.172;QD=34.95;ReadPosRankSum=3.913;VQSLOD=4.6767;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:93.27:0,93,1164	0/0:4,0:4:11.97:0,12,120	0/0:41,0:33:69.21:0,69,744	0/0:35,0:31:38.04:0,38,451	0/0:16,0:16:47.91:0,48,516	0/0:17,0:17:51.06:0,51,613	0/0:24,0:24:63.20:0,63,802	0/0:29,0:28:72.17:0,72,839	0/0:18,0:18:54.01:0,54,635	1/1:1,27:28:78.16:1017,78,0	1/1:1,20:21:50.45:760,50,0	0/0:17,0:17:48.13:0,48,584	1/1:0,13:13:24.08:345,24,0	1/1:0,17:17:39.13:561,39,0	0/0:22,0:22:66.17:0,66,792	0/0:20,0:20:57.16:0,57,700	0/0:42,0:42:99:0,126,1525	1/1:0,24:24:51.17:733,51,0	0/0:21,0:21:60.13:0,60,724	0/0:15,0:15:45.14:0,45,570	0/0:26,0:26:78.25:0,78,1003	1/1:0,15:15:42.06:577,42,0	1/1:0,12:12:30.10:431,30,0	1/1:1,31:32:87.28:1233,87,0	1/1:0,27:27:66.22:949,66,0	0/0:19,0:19:57.17:0,57,712	0/0:17,0:17:51.11:0,51,622	0/0:11,0:11:27.09:0,27,349
chr10	92042738	.	G	GC	8958.33	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-18.458;DP=719;FS=2.111;HRun=2;HaplotypeScore=114.7609;InbreedingCoeff=0.9984;MQ=86.46;MQ0=0;MQRankSum=-1.281;QD=39.81;ReadPosRankSum=-0.335;VQSLOD=4.2809;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,1569	0/0:16,0:16:48.15:0,48,595	0/0:21,0:21:57.16:0,57,692	0/0:26,0:26:72.20:0,72,865	0/0:25,0:25:66.21:0,66,818	0/0:21,0:21:63.20:0,63,781	0/0:20,0:20:60.19:0,60,744	0/0:23,0:23:57.17:0,57,695	0/0:31,0:31:93.27:0,93,1127	1/1:0,42:42:99:1791,126,0	1/1:0,20:20:60.20:863,60,0	0/0:22,0:22:60.19:0,60,743	1/1:1,23:24:63.21:907,63,0	1/1:0,23:23:60.20:864,60,0	0/0:33,0:33:93.29:0,93,1153	0/0:35,0:35:99:0,105,1277	0/0:13,0:13:39.10:0,39,469	1/1:1,21:22:63.21:907,63,0	0/0:22,0:22:60.14:0,60,719	0/0:26,0:26:72.23:0,72,892	0/0:38,0:38:99:0,108,1338	1/1:1,29:30:81.27:1165,81,0	1/1:0,19:19:54.08:777,54,0	1/1:1,18:19:51.17:734,51,0	1/1:1,25:26:66.22:950,66,0	0/0:19,1:20:16.97:0,17,663	0/0:39,0:39:99:0,114,1399	0/0:19,0:19:57.18:0,57,706
chr10	92042932	.	GA	G	6970.55	PASS	AB=0.952;AC=27;AF=0.482;AN=56;BaseQRankSum=15.573;DP=651;FS=2.548;HRun=9;HaplotypeScore=83.9728;InbreedingCoeff=0.9484;MQ=74.55;MQ0=0;MQRankSum=-4.365;QD=21.58;ReadPosRankSum=2.967;VQSLOD=5.6359;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1374	1/1:1,3:4:5.99:55,6,0	0/1:18,1:19:0.09:0,0,197	0/0:8,0:9:19.44:0,19,185	1/1:4,28:32:69.01:631,69,0	0/0:22,0:22:63.18:0,63,718	0/0:15,0:15:39.12:0,39,450	1/1:1,25:25:69.04:632,69,0	1/1:1,29:31:89.08:802,89,0	0/0:27,0:27:75.18:0,75,838	0/0:28,2:30:32.37:0,32,863	1/1:3,17:19:51:460,51,0	0/0:24,0:25:69.04:0,69,772	0/0:23,0:23:57.16:0,57,650	1/1:7,26:33:78.03:714,78,0	0/0:25,0:25:72.21:0,72,831	1/1:2,22:24:63.03:581,63,0	0/0:21,0:21:60.18:0,60,692	1/1:3,12:15:36:324,36,0	1/1:3,26:29:78.04:714,78,0	1/1:8,10:17:32.99:297,33,0	0/0:25,1:26:44.75:0,45,769	0/0:20,0:20:34.10:0,34,598	0/0:25,0:26:75.01:0,75,829	0/0:18,0:18:48.10:0,48,532	1/1:1,20:21:60.04:554,60,0	1/1:5,31:36:93.03:846,93,0	1/1:1,13:14:39.02:361,39,0
chr10	92042997	.	TCCCA	T	16044.89	PASS	AB=0.523;AC=25;AF=0.446;AN=56;BaseQRankSum=17.576;DP=692;FS=2.379;HRun=0;HaplotypeScore=129.7389;InbreedingCoeff=0.9288;MQ=77.78;MQ0=0;MQRankSum=-10.601;QD=54.21;ReadPosRankSum=0.025;VQSLOD=6.0354;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,3824	1/1:0,14:14:33.11:692,33,0	0/0:24,0:24:72.22:0,72,1890	0/0:13,0:14:42.14:0,42,1065	1/1:0,29:29:75.26:1561,75,0	0/0:32,0:32:93.79:0,94,2696	0/0:23,0:23:69.21:0,69,1876	1/1:0,35:34:99:2043,102,0	1/1:1,25:26:66.21:1314,66,0	0/0:34,0:34:99:0,102,2849	0/0:25,0:25:75.24:0,75,2095	1/1:2,24:25:75.26:1537,75,0	0/0:25,0:25:75.26:0,75,2137	0/0:17,0:17:48.16:0,48,1356	1/1:2,22:24:60.21:1255,60,0	0/0:21,0:21:63.22:0,63,1801	1/1:1,19:20:49.10:1054,49,0	0/0:27,0:27:81.28:0,81,2311	1/1:0,11:11:33.10:617,33,0	1/1:4,28:32:82.86:1630,83,0	1/1:1,17:17:42.12:839,42,0	0/0:31,0:31:93.28:0,93,2578	0/0:27,0:27:81.28:0,81,2310	0/0:33,0:33:96.31:0,96,2630	0/0:19,0:19:57.20:0,57,1652	0/1:2,21:23:17.78:1254,0,18	1/1:1,23:24:69.24:1431,69,0	1/1:1,13:14:39.13:816,39,0
chr10	92043262	.	GGTTATA	G	2952.50	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.741;DP=598;FS=31.483;HRun=0;HaplotypeScore=132.6281;InbreedingCoeff=0.9888;MQ=92.32;MQ0=0;MQRankSum=-10.354;QD=57.89;ReadPosRankSum=1.972;VQSLOD=1.7375;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.31:0,90,3118	1/1:0,4:4:12.04:288,12,0	0/0:38,0:38:99:0,108,3377	0/0:27,0:27:58.84:0,59,2283	0/0:22,0:22:48.16:0,48,1599	0/0:21,0:21:63.22:0,63,2254	0/0:16,0:16:45.15:0,45,1518	0/0:28,0:28:75.26:0,75,2647	0/0:18,0:18:54.19:0,54,1846	0/0:23,0:23:69.23:0,69,2335	0/0:17,0:17:51.18:0,51,1784	0/0:20,0:20:60.21:0,60,2151	0/0:29,0:29:84.29:0,84,2962	0/0:28,0:28:84.29:0,84,2958	1/1:3,27:30:78.27:1868,78,0	0/0:14,0:14:42.14:0,42,1514	1/1:0,17:17:39.13:935,39,0	0/0:21,0:21:63.22:0,63,2070	0/0:25,0:25:75.24:0,75,2202	0/0:19,0:19:54.19:0,54,1940	0/0:23,0:23:66.23:0,66,2344	0/0:17,0:17:51.16:0,51,1603	0/0:17,0:17:51.18:0,51,1798	0/0:22,0:22:66.23:0,66,2339	0/0:18,0:18:54.19:0,54,1872	0/0:15,0:15:45.15:0,45,1622	0/0:24,0:23:72.25:0,72,2496	0/0:15,0:14:39.13:0,39,1347
chr10	92044177	.	A	AC	1816.84	PASS	AB=0.711;AC=15;AF=0.268;AN=56;BaseQRankSum=-6.121;DP=479;FS=1.049;HRun=0;HaplotypeScore=70.8089;InbreedingCoeff=0.6585;MQ=51.55;MQ0=14;MQRankSum=3.537;QD=11.72;ReadPosRankSum=1.413;VQSLOD=3.6170;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:46.08:0,46,471	0/0:8,0:8:10.48:0,10,75	0/0:33,0:8:7.21:0,7,91	0/0:27,0:4:6.23:0,6,83	0/0:23,0:22:40.57:0,41,416	0/0:12,0:11:23.80:0,24,149	0/0:22,0:20:25.95:0,26,169	0/0:18,0:18:39.33:0,39,448	0/0:14,0:12:29.70:0,30,303	0/1:7,5:12:9.45:148,0,9	1/1:3,21:24:35.87:426,36,0	0/0:12,0:10:24.06:0,24,283	0/1:7,1:7:18.30:180,0,18	1/1:3,12:14:20.64:186,21,0	0/0:12,0:9:7.71:0,8,35	0/0:16,0:15:36.65:0,37,265	0/0:13,0:11:12.31:0,12,71	1/1:12,13:20:7.22:181,7,0	0/0:12,0:11:32.64:0,33,289	0/0:17,0:15:35.62:0,36,344	0/0:13,0:13:17.22:0,17,278	1/1:2,9:11:26.50:207,27,0	1/1:6,13:18:20.88:227,21,0	1/1:10,7:16:20.41:198,20,0	0/1:4,15:18:20.83:252,0,21	0/0:26,0:25:62.88:0,63,685	0/0:14,0:13:35.81:0,36,369	0/0:5,0:4:8.06:0,8,87
chr10	92044338	.	AAAGC	A	5165	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=11.538;DP=607;FS=0.332;HRun=0;HaplotypeScore=159.0810;InbreedingCoeff=0.8503;MQ=57.09;MQ0=3;MQRankSum=-7.567;QD=22.55;ReadPosRankSum=-1.350;VQSLOD=4.0395;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:92.81:0,93,1824	0/0:6,0:6:14.75:0,15,206	0/0:29,0:21:43.36:0,43,758	0/0:21,0:14:25.32:0,25,466	1/1:6,10:16:44.68:480,45,0	0/0:23,0:23:54.08:0,54,1210	0/0:27,0:27:81.23:0,81,1851	1/1:7,24:31:86.79:755,87,0	1/1:8,15:23:63.17:820,63,0	0/0:23,0:23:66.04:0,66,1488	0/0:20,0:20:60.14:0,60,1335	1/1:4,4:8:21.06:276,21,0	0/0:17,0:17:47.97:0,48,974	0/0:20,0:20:57.11:0,57,1415	0/1:18,0:17:6.94:7,0,530	0/0:21,0:21:60.03:0,60,1236	0/1:34,0:34:99:237,0,798	0/0:30,0:30:69.11:0,69,1678	1/1:11,5:13:9.02:331,9,0	1/1:7,8:15:33.40:341,33,0	1/1:15,4:19:45.25:369,45,0	0/0:20,0:20:54.07:0,54,1177	0/0:22,0:22:55.05:0,55,1462	0/0:50,0:50:99:0,138,2987	0/0:17,0:17:51.09:0,51,1007	1/1:11,13:24:65.90:766,66,0	1/1:8,8:16:42.05:510,42,0	1/1:5,4:9:24.02:271,24,0
chr10	92044365	.	ACAAT	A	6804.05	PASS	AB=0.997;AC=35;AF=0.625;AN=56;BaseQRankSum=-1.299;DP=631;FS=0.616;HRun=0;HaplotypeScore=163.3012;InbreedingCoeff=-0.1311;MQ=63.67;MQ0=1;MQRankSum=-3.869;QD=12.48;ReadPosRankSum=-7.919;VQSLOD=1.9618;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.12:0,81,1857	0/1:7,0:7:10.65:11,0,186	0/0:31,0:24:59.75:0,60,847	0/0:27,0:24:61.06:0,61,903	1/1:1,15:16:38.73:454,39,0	0/1:20,0:20:72.94:73,0,608	0/1:28,0:28:21.35:21,0,848	1/1:27,2:29:73.62:644,74,0	1/1:7,15:22:64.84:883,65,0	0/1:24,0:24:74.86:75,0,738	0/1:19,0:19:14.08:14,0,563	1/1:11,4:15:41.86:462,42,0	0/1:19,0:19:68.97:69,0,454	0/1:27,0:27:99:122,0,726	0/1:28,0:28:99:211,0,523	0/1:24,0:24:99:178,0,546	0/1:29,0:29:99:101,0,836	0/1:32,0:32:99:195,0,714	1/1:1,18:19:55.88:571,56,0	1/1:12,8:20:51.63:472,52,0	1/1:17,4:21:46.95:388,47,0	0/1:19,0:19:23.85:24,0,553	0/1:23,1:24:73.53:74,0,645	0/1:44,0:44:70.70:71,0,1378	0/1:13,0:13:20.04:20,0,402	1/1:10,13:23:65.78:818,66,0	1/1:10,8:18:53.99:640,54,0	1/1:1,4:5:15.04:216,15,0
chr10	92046559	.	AC	A	14214.87	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=17.856;DP=820;FS=0.821;HRun=2;HaplotypeScore=112.6875;InbreedingCoeff=0.9996;MQ=82.12;MQ0=0;MQRankSum=-5.133;QD=36.64;ReadPosRankSum=1.967;VQSLOD=4.6794;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,2172	1/1:0,9:9:24.08:315,24,0	0/0:26,0:25:66.22:0,66,967	0/0:38,0:38:53.99:0,54,1111	1/1:0,24:24:69.22:898,69,0	0/0:23,0:23:63.21:0,63,944	0/0:37,0:37:99:0,108,1579	1/1:1,39:40:99:1490,117,0	1/1:0,42:42:99:1636,126,0	0/0:27,0:27:81.26:0,81,1180	0/0:11,0:11:33.11:0,33,493	1/1:5,30:35:99:1239,99,0	0/0:35,0:35:99:0,102,1529	0/0:29,0:29:87.24:0,87,1259	1/1:0,42:42:99:1603,123,0	0/0:53,0:53:99:0,160,2383	1/1:1,37:38:99:1325,102,0	0/0:12,0:12:36.08:0,36,497	1/1:1,22:23:66.20:844,66,0	1/1:1,28:29:84.27:1091,84,0	1/1:0,41:41:99:1402,108,0	0/0:22,0:22:63.21:0,63,942	0/0:10,0:10:30.10:0,30,449	0/0:31,0:31:93.27:0,93,1348	0/0:26,0:26:75.23:0,75,1087	1/1:4,29:33:51.32:1162,51,0	1/1:0,20:20:60.20:779,60,0	1/1:0,12:12:33.11:430,33,0
chr10	92046646	.	GACTGA	G	20672.17	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=18.640;DP=815;FS=1.463;HRun=0;HaplotypeScore=168.3651;InbreedingCoeff=0.9975;MQ=79.66;MQ0=0;MQRankSum=-6.837;QD=56.48;ReadPosRankSum=2.702;VQSLOD=5.6216;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,157,4770	1/1:1,4:5:15.05:314,15,0	0/0:23,0:23:59.77:0,60,1479	0/0:27,0:27:36.75:0,37,1559	1/1:3,20:23:63.22:1339,63,0	0/0:24,0:24:69.22:0,69,2089	0/0:32,0:32:90.31:0,90,2818	1/1:3,23:26:69.24:1469,69,0	1/1:6,34:40:99:2416,114,0	0/0:34,0:34:93.32:0,93,2912	0/0:25,0:25:69.24:0,69,2090	1/1:2,36:38:99:2109,99,0	0/0:29,0:29:72.23:0,72,2161	0/0:33,0:33:90.30:0,90,2747	1/1:4,35:39:99:2339,114,0	0/0:34,0:34:99:0,99,2988	1/1:7,22:29:78.20:1539,78,0	0/0:8,0:8:24.08:0,24,706	1/1:2,20:22:57.11:1055,57,0	1/1:1,29:30:87.76:1815,88,0	1/1:6,26:32:69.24:1470,69,0	0/0:36,0:36:99:0,102,2819	0/0:26,0:26:72.25:0,72,2245	0/0:48,0:48:99:0,144,4305	0/0:18,0:18:54.14:0,54,1438	1/1:6,36:42:99:2414,117,0	1/1:3,26:29:84.26:1691,84,0	1/1:1,10:11:33.11:702,33,0
chr10	92047745	.	GC	G	11733.17	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=13.518;DP=697;FS=1.237;HRun=5;HaplotypeScore=79.6754;InbreedingCoeff=0.9913;MQ=82.83;MQ0=0;MQRankSum=-2.115;QD=34.31;ReadPosRankSum=4.237;VQSLOD=4.7651;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1632	1/1:0,11:11:30.10:389,30,0	0/0:17,0:17:45.11:0,45,611	0/0:23,0:23:22.92:0,23,631	1/1:1,20:21:45.08:584,45,0	0/0:23,0:23:63.21:0,63,942	0/0:36,0:36:99:0,105,1561	1/1:1,21:22:60.19:774,60,0	1/1:2,23:25:54.12:681,54,0	0/0:29,0:29:78.26:0,78,1160	0/0:9,0:9:24.04:0,24,300	1/1:1,30:31:84.27:1090,84,0	0/0:25,0:25:75.25:0,75,1118	0/0:28,0:28:84.03:0,84,1148	1/1:0,30:30:84.27:1088,84,0	0/0:17,0:17:42.12:0,42,589	1/1:1,55:56:99:1947,150,0	0/0:26,0:26:75.25:0,75,1120	1/1:0,16:16:48.12:592,48,0	1/1:1,20:21:51.16:652,51,0	1/1:2,57:59:99:2138,166,0	0/0:15,0:15:45.15:0,45,671	0/0:17,0:17:51.17:0,51,752	0/0:36,0:36:99:0,108,1617	0/0:17,0:17:51.17:0,51,763	1/1:0,22:22:66.19:829,66,0	1/1:0,25:25:66.21:853,66,0	1/1:0,3:3:9.03:117,9,0
chr10	92047800	.	AC	A	1898.72	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.880;DP=656;FS=3.054;HRun=5;HaplotypeScore=84.7042;InbreedingCoeff=0.9777;MQ=73.17;MQ0=0;MQRankSum=-0.846;QD=26.01;ReadPosRankSum=1.572;VQSLOD=3.2936;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,1550	0/0:10,0:10:27.09:0,27,369	0/0:12,0:12:33.04:0,33,380	0/0:15,0:15:45.12:0,45,580	0/0:23,0:23:60.20:0,60,816	1/1:0,19:19:48.14:544,48,0	1/1:5,27:32:75.21:851,75,0	0/0:32,0:32:90.27:0,90,1186	0/0:19,0:19:42.14:0,42,574	0/0:20,0:20:57.18:0,57,752	0/0:7,0:7:21.07:0,21,278	0/0:31,0:31:84.27:0,84,1134	0/0:21,0:21:63.17:0,63,826	0/0:21,0:21:60.18:0,60,803	0/0:26,0:26:69.23:0,69,943	1/1:1,21:22:57.16:647,57,0	0/0:50,0:50:99:0,117,1566	0/0:33,0:33:84.21:0,84,1109	0/0:20,0:20:48.10:0,48,579	0/0:16,0:16:42.04:0,42,504	0/0:50,0:50:99:0,138,1768	0/0:20,0:20:57.19:0,57,779	0/0:19,0:18:48.05:0,48,583	0/0:39,0:39:99:0,111,1453	0/0:15,0:15:42.14:0,42,574	0/0:20,0:20:54.17:0,54,723	0/0:20,0:20:54.17:0,54,721	0/0:3,0:3:9.03:0,9,123
chr10	92048152	.	C	CT	4388.89	PASS	AB=0.804;AC=26;AF=0.464;AN=56;BaseQRankSum=-5.012;DP=408;FS=2.210;HRun=9;HaplotypeScore=45.0849;InbreedingCoeff=0.8517;MQ=65.40;MQ0=0;MQRankSum=-2.480;QD=22.05;ReadPosRankSum=-2.901;VQSLOD=4.3431;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:74.96:0,75,650	1/1:1,4:5:12.03:133,12,0	0/0:9,0:8:8.99:0,9,78	0/0:5,0:5:9:0,9,78	1/1:7,11:18:35.92:336,36,0	0/0:11,0:11:26.99:0,27,234	0/0:15,0:15:26.97:0,27,234	1/1:3,22:25:57.10:607,57,0	1/1:4,10:14:27.04:285,27,0	0/0:16,0:15:38.99:0,39,337	0/0:10,0:10:29.99:0,30,260	1/1:3,12:15:36.07:386,36,0	0/0:10,0:10:29.99:0,30,260	0/0:14,0:14:32.97:0,33,286	1/1:1,12:13:27.07:299,27,0	0/0:13,0:13:29.98:0,30,260	1/1:4,16:20:41.49:463,41,0	0/0:25,0:25:53.82:0,54,469	1/1:5,12:18:41.93:435,42,0	1/1:1,10:11:30.04:318,30,0	1/1:2,8:10:24.06:265,24,0	0/0:7,0:7:14.98:0,15,130	0/1:10,0:10:0.40:0,0,158	0/0:23,0:23:41.95:0,42,365	0/0:17,0:16:35.97:0,36,312	0/1:6,11:17:36.06:323,0,36	1/1:4,16:20:22.07:472,22,0	1/1:1,2:3:6.02:66,6,0
chr10	92048222	.	T	TTTA	2783.11	PASS	AB=0.750;AC=19;AF=0.339;AN=56;BaseQRankSum=-6.403;DP=326;FS=4.182;HRun=0;HaplotypeScore=56.0225;InbreedingCoeff=0.7844;MQ=50.64;MQ0=22;MQRankSum=1.431;QD=23.79;ReadPosRankSum=2.483;VQSLOD=3.0030;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:50.82:0,51,546	0/0:3,0:3:5.81:0,6,34	0/0:18,0:8:23.77:0,24,192	0/0:9,0:2:2.84:0,3,14	0/1:12,6:17:27.85:430,0,28	0/0:10,0:8:17.85:0,18,129	0/0:7,0:7:13.41:0,13,107	1/1:9,18:26:37.14:617,37,0	1/1:4,5:8:21:336,21,0	0/0:16,0:16:33:0,33,331	0/0:9,0:7:12.02:0,12,126	1/1:3,3:6:8.87:176,9,0	0/0:4,0:3:8.98:0,9,81	0/0:10,0:8:20.96:0,21,212	0/0:8,0:6:14.84:0,15,101	0/0:10,0:10:27:0,27,345	0/0:12,0:11:10.08:0,10,116	0/0:19,0:16:41.62:0,42,442	1/1:15,5:19:31.72:495,32,0	1/1:7,4:11:12.99:360,13,0	1/1:0,4:4:11.63:176,12,0	0/0:8,0:8:14.98:0,15,152	0/0:9,0:6:6.02:0,6,73	0/0:14,0:14:24.03:0,24,274	0/0:15,0:13:27:0,27,277	1/1:7,2:9:17.70:218,18,0	1/1:8,0:6:17.93:154,18,0	1/1:5,0:2:2.98:21,3,0
chr10	92048223	.	T	TTA	1628.32	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=-1.399;DP=324;FS=1.422;HRun=0;HaplotypeScore=51.5835;InbreedingCoeff=0.5468;MQ=50.23;MQ0=23;MQRankSum=1.841;QD=13.92;ReadPosRankSum=2.709;VQSLOD=3.4035;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:50.75:0,51,505	0/0:3,0:3:5.84:0,6,34	0/0:18,0:8:20.47:0,20,171	0/0:9,0:2:2.96:0,3,19	0/1:18,0:17:31.10:247,0,31	0/0:10,0:8:14.87:0,15,107	0/0:7,0:7:8.56:0,9,77	1/1:24,2:25:7.78:425,8,0	1/1:9,0:8:20.88:197,21,0	0/0:14,0:14:32.97:0,33,300	0/0:9,0:7:14.72:0,15,123	0/1:6,0:6:16.59:63,0,17	0/0:4,0:3:8.97:0,9,75	0/0:10,0:8:20.94:0,21,187	0/0:8,0:6:14.84:0,15,101	0/0:10,0:10:26.95:0,27,310	0/0:13,0:11:23.02:0,23,142	0/0:20,0:17:41.73:0,42,389	0/1:19,0:18:2.85:267,0,3	1/1:10,1:11:12.31:231,12,0	1/1:4,0:4:11.58:84,12,0	0/0:7,0:7:14.98:0,15,144	0/0:9,0:6:6.01:0,6,61	0/0:14,0:14:24.01:0,24,233	0/0:15,0:13:26.99:0,27,248	0/1:9,0:9:12.39:140,0,12	1/1:9,1:8:14.76:133,15,0	1/1:5,0:2:2.98:21,3,0
chr10	92050239	.	CTGTGTGTGTGTGTG	C	8243.86	PASS	AB=0.600;AC=19;AF=0.339;AN=56;BaseQRankSum=8.741;DP=634;FS=2.205;HRun=0;HaplotypeScore=242.1319;InbreedingCoeff=0.8544;MQ=64.87;MQ0=16;MQRankSum=-7.223;QD=34.93;ReadPosRankSum=1.049;VQSLOD=3.7170;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:33.11:0,33,1672	0/0:4,0:8:18.06:0,18,870	0/0:20,0:13:3.01:0,3,40	0/0:22,0:16:9.02:0,9,116	1/1:5,22:27:48.16:1753,48,0	0/0:12,0:22:21.06:0,21,535	0/0:14,0:21:21.05:0,21,610	1/1:13,13:22:38.42:467,38,0	1/1:11,22:33:33.11:1216,33,0	0/0:25,0:27:60.20:0,60,2883	0/0:16,0:16:27.09:0,27,1596	1/1:6,16:22:8.15:829,8,0	0/0:10,0:11:14.68:0,15,571	0/0:18,0:29:32.86:0,33,946	0/0:23,0:37:54.15:0,54,2634	0/0:11,0:23:29.56:0,30,771	0/0:16,0:23:24.51:0,25,1246	0/0:14,0:20:37.94:0,38,1494	1/1:11,6:17:15.05:493,15,0	1/1:8,19:28:33.11:1114,33,0	1/1:24,0:21:7.46:100,7,0	0/0:11,0:22:39.09:0,39,1323	0/0:9,0:17:30.08:0,30,1151	0/0:13,0:34:42.10:0,42,1765	0/0:14,0:22:51.16:0,51,1855	1/1:15,9:24:25.45:642,25,0	1/1:9,17:28:39.13:1405,39,0	0/1:2,4:6:73.61:227,0,74
chr10	92051728	.	AC	A	7159.31	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=0.812;DP=523;FS=5.899;HRun=10;HaplotypeScore=81.5085;InbreedingCoeff=0.6722;MQ=61.48;MQ0=9;MQRankSum=-0.130;QD=15.27;ReadPosRankSum=4.746;VQSLOD=5.3060;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:86.41:0,86,896	1/1:0,4:5:11.04:84,11,0	0/1:22,0:9:5.63:6,0,40	0/0:12,0:11:0.68:0,1,40	1/1:5,13:20:40.73:325,41,0	1/1:2,6:7:17.93:146,18,0	1/1:3,15:18:26.90:224,27,0	1/1:6,14:20:31.45:277,31,0	1/1:1,7:8:17.08:119,17,0	1/1:3,15:18:41.99:364,42,0	1/1:4,15:19:32.92:277,33,0	1/1:6,9:16:12.23:183,12,0	1/1:2,9:11:23.99:208,24,0	1/1:5,16:21:26.98:234,27,0	1/1:6,14:20:27.30:335,27,0	1/1:4,14:16:29.86:245,30,0	1/1:5,25:30:65.82:558,66,0	1/1:7,16:20:35.94:305,36,0	1/1:7,12:16:29.97:253,30,0	1/1:6,22:28:62.69:518,63,0	1/1:2,9:12:29.36:239,29,0	1/1:2,18:19:38.95:331,39,0	1/1:2,14:16:38.85:322,39,0	1/1:3,17:20:35.99:312,36,0	1/1:4,16:20:21.10:295,21,0	1/1:2,18:23:48.90:464,49,0	1/1:1,17:20:54.64:433,55,0	1/1:0,4:4:11.99:102,12,0
chr10	92054602	.	TA	T	893.20	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.757;DP=415;FS=4.063;HRun=8;HaplotypeScore=47.0437;InbreedingCoeff=0.7854;MQ=58.73;MQ0=3;MQRankSum=1.079;QD=21.27;ReadPosRankSum=2.620;VQSLOD=3.8646;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,1159	1/1:1,7:8:14.97:134,15,0	0/0:4,0:1:3.01:0,3,36	0/0:4,0:3:2.20:0,2,56	0/0:32,0:32:96.28:0,96,1150	0/0:18,0:18:48.14:0,48,570	0/0:9,0:9:18.06:0,18,217	0/0:44,0:43:99:0,120,1421	0/0:17,0:17:42.11:0,42,495	0/0:20,0:20:54.03:0,54,285	0/0:7,0:7:17.25:0,17,91	0/0:19,0:19:50.80:0,51,569	0/0:7,0:7:17.52:0,18,103	0/0:6,0:6:14.29:0,14,73	1/1:0,14:14:39.06:376,39,0	0/0:8,0:8:24.07:0,24,290	1/1:1,19:20:54.09:521,54,0	0/0:24,0:24:70.12:0,70,409	0/0:12,0:12:36.08:0,36,412	0/0:15,0:15:39.11:0,39,459	0/0:9,0:9:18.06:0,18,217	0/0:4,0:4:11.46:0,11,60	0/0:3,0:3:8.72:0,9,49	0/0:1,0:1:2.94:0,3,18	0/0:21,0:21:60.26:0,60,314	0/0:18,0:18:45.14:0,45,544	0/0:24,0:25:59.56:0,60,714	0/0:10,0:10:30.09:0,30,362
chr10	92055709	.	ACCTCTT	A	3726.85	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.236;DP=789;FS=1.699;HRun=0;HaplotypeScore=161.6775;InbreedingCoeff=0.9967;MQ=89.13;MQ0=0;MQRankSum=-11.843;QD=54.01;ReadPosRankSum=1.654;VQSLOD=4.0493;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,4197	1/1:1,11:12:18.06:425,18,0	0/0:40,0:40:99:0,105,3417	0/0:24,0:24:27.50:0,27,1796	0/0:32,0:32:78.27:0,78,2769	0/0:21,0:21:63.22:0,63,2182	0/0:37,0:37:99:0,105,3622	0/0:47,0:46:99:0,132,4391	0/0:21,0:21:63.22:0,63,2246	0/0:25,0:25:69.24:0,69,2446	0/0:20,0:20:54.16:0,54,1724	0/0:30,0:30:87.30:0,87,3006	0/0:28,0:28:78.27:0,78,2769	0/0:25,0:25:75.26:0,75,2674	1/1:1,38:39:99:2431,105,0	0/0:21,0:21:57.18:0,57,1889	1/1:1,17:18:39.09:871,39,0	0/0:30,0:30:90.31:0,90,2992	0/0:21,0:20:63.21:0,63,2103	0/0:24,0:24:66.23:0,66,2321	0/0:42,0:42:99:0,120,4195	0/0:21,0:21:63.22:0,63,2236	0/0:27,0:27:75.26:0,75,2675	0/0:44,0:44:99:0,129,4435	0/0:19,0:19:54.16:0,54,1834	0/0:36,0:36:99:0,102,3553	0/0:32,0:32:93.30:0,93,3206	0/0:11,0:11:33.11:0,33,1167
chr10	92056920	.	TA	T	7946.49	PASS	AB=0.556;AC=43;AF=0.768;AN=56;BaseQRankSum=10.790;DP=574;FS=1.448;HRun=11;HaplotypeScore=63.5526;InbreedingCoeff=0.8799;MQ=67.36;MQ0=7;MQRankSum=-1.983;QD=18.83;ReadPosRankSum=2.547;VQSLOD=5.9687;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:26:50.44:0,50,717	1/1:2,7:9:20.97:173,21,0	0/0:29,2:11:14.86:0,15,107	0/0:29,0:11:5.26:0,5,68	1/1:0,22:22:53.88:437,54,0	0/0:20,0:21:47.96:0,48,485	0/0:26,0:26:72.13:0,72,748	1/1:4,27:31:74.80:601,75,0	1/1:0,21:21:50.80:419,51,0	1/1:3,26:29:45.87:578,46,0	1/1:2,14:17:40.88:317,41,0	1/1:1,20:21:59.93:493,60,0	1/1:0,11:11:32.96:271,33,0	1/1:2,16:18:44.94:369,45,0	1/1:7,12:17:35.88:285,36,0	0/0:19,0:19:51.13:0,51,544	1/1:4,16:20:50.92:416,51,0	1/1:6,36:43:94.86:764,95,0	1/1:2,9:11:23.91:188,24,0	1/1:1,18:19:53.94:443,54,0	1/1:2,15:17:35.96:296,36,0	0/1:2,8:10:8.02:148,0,8	1/1:5,11:16:20.97:172,21,0	1/1:7,20:27:50.93:419,51,0	1/1:4,15:19:41.95:345,42,0	1/1:1,15:16:44.95:369,45,0	1/1:1,14:15:38.92:320,39,0	1/1:2,8:10:14.98:123,15,0
chr10	92056941	.	C	CAA	1312.21	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.252;DP=564;FS=0.000;HRun=8;HaplotypeScore=90.9427;InbreedingCoeff=0.9187;MQ=57.48;MQ0=9;MQRankSum=-6.871;QD=29.82;ReadPosRankSum=-0.835;VQSLOD=3.4903;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:69.16:0,69,769	1/1:5,2:7:20.99:274,21,0	0/0:30,0:6:10.63:0,11,78	0/0:32,0:8:1.38:0,1,7	0/0:24,0:24:63.16:0,63,702	0/0:22,0:22:57.13:0,57,634	0/0:29,0:29:78.17:0,78,848	0/0:28,0:28:66.12:0,66,702	0/0:22,0:22:53.92:0,54,591	0/0:26,0:26:66.16:0,66,729	0/0:15,0:15:39.10:0,39,434	0/0:19,0:19:54.13:0,54,593	0/0:12,0:12:33.09:0,33,368	0/0:15,0:15:45.11:0,45,492	1/1:7,10:16:39.13:584,39,0	0/0:18,0:18:51.14:0,51,568	1/1:8,11:19:39.13:595,39,0	0/0:42,0:41:93.18:0,93,1024	0/0:17,0:16:38.81:0,39,401	0/0:20,0:20:48.09:0,48,513	0/0:17,0:17:39.08:0,39,425	0/0:10,0:10:30.08:0,30,334	0/0:10,0:10:21.06:0,21,234	0/0:19,0:19:45.11:0,45,501	0/0:18,0:18:45.12:0,45,501	0/0:18,0:18:51.13:0,51,566	0/0:18,0:18:36.09:0,36,400	0/0:10,0:10:21.06:0,21,234
chr10	92056946	.	AAAAC	A	606.25	PASS	AB=0.776;AC=3;AF=0.054;AN=56;BaseQRankSum=5.376;DP=552;FS=0.000;HRun=0;HaplotypeScore=108.8307;InbreedingCoeff=-0.0048;MQ=56.40;MQ0=7;MQRankSum=-6.024;QD=13.47;ReadPosRankSum=-2.704;VQSLOD=2.7792;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.22:0,75,1641	0/1:5,2:7:66.11:158,0,66	0/0:30,0:7:13.55:0,14,169	0/0:30,0:7:2.23:0,2,7	0/0:26,0:26:66.21:0,66,1400	0/0:23,0:23:66.21:0,66,1344	0/0:28,0:28:81.24:0,81,1577	0/0:30,0:30:72.16:0,72,1191	0/0:21,0:21:54.17:0,54,1043	0/0:24,0:24:69.21:0,69,1370	0/0:13,0:13:39.13:0,39,888	0/0:19,0:19:57.17:0,57,1139	0/0:12,0:12:36.11:0,36,705	0/0:15,0:15:45.15:0,45,931	0/1:12,6:16:99:231,0,301	0/0:17,0:17:51.17:0,51,1231	0/1:15,5:20:99:317,0,143	0/0:39,0:38:96.28:0,96,2033	0/0:22,0:20:53.98:0,54,880	0/0:18,0:18:51.15:0,51,1068	0/0:15,0:15:39.13:0,39,836	0/0:10,0:10:30.10:0,30,624	0/0:8,0:8:21.07:0,21,441	0/0:19,0:19:45.12:0,45,771	0/0:17,0:17:45.14:0,45,897	0/0:18,0:18:51.17:0,51,1118	0/0:14,0:14:36.11:0,36,701	0/0:10,0:10:21.07:0,21,441
chr10	92057168	.	G	GAA	3143.73	PASS	AB=0.745;AC=31;AF=0.554;AN=56;BaseQRankSum=-5.105;DP=362;FS=0.525;HRun=11;HaplotypeScore=61.0067;InbreedingCoeff=0.6138;MQ=76.40;MQ0=5;MQRankSum=-0.486;QD=13.43;ReadPosRankSum=1.636;VQSLOD=1.5802;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,1:24:40.44:172,40,0	1/1:2,3:6:14.54:178,15,0	0/0:36,0:16:18.86:0,19,177	0/1:40,0:13:2.31:2,0,74	0/0:11,0:11:24.02:0,24,233	0/1:1,0:11:11.25:33,0,11	0/1:5,0:10:12.57:13,0,45	0/0:20,0:20:39:0,39,378	0/0:5,0:5:12.01:0,12,116	1/1:5,7:12:30:362,30,0	0/1:4,7:11:2.01:308,0,2	0/0:11,0:12:29.75:0,30,267	1/1:1,0:8:9.71:33,10,0	1/1:0,8:8:18.06:260,18,0	1/1:2,4:7:11.53:138,12,0	1/1:3,0:7:12.35:43,12,0	1/1:3,18:23:37.63:494,38,0	1/1:3,12:18:38.04:440,38,0	0/0:7,0:8:11.96:0,12,166	0/0:7,0:7:11.99:0,12,116	0/0:5,0:4:3:0,3,29	1/1:0,2:2:6.02:82,6,0	1/1:4,3:7:7.84:92,8,0	1/1:0,4:3:9.03:130,9,0	1/1:6,16:22:16.01:555,16,0	0/1:10,1:12:10.67:11,0,241	0/0:11,0:11:14.81:0,15,195	0/0:9,0:11:23.46:0,23,198
chr10	92057272	.	CAA	C	2170.60	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-0.541;DP=484;FS=2.838;HRun=13;HaplotypeScore=74.4482;InbreedingCoeff=0.8808;MQ=72.21;MQ0=11;MQRankSum=1.624;QD=17.23;ReadPosRankSum=3.959;VQSLOD=3.1214;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:27:62.17:0,62,812	0/0:2,0:2:6:0,6,52	0/0:44,0:19:10.62:0,11,264	0/0:49,0:14:17.26:0,17,142	0/0:14,0:18:29.07:0,29,351	0/0:18,0:18:38.85:0,39,302	0/0:6,0:6:17.93:0,18,139	0/0:32,0:30:67.50:0,68,832	0/0:7,0:8:20.55:0,21,253	1/1:3,16:19:48.07:466,48,0	1/1:4,10:15:11.91:166,12,0	0/0:12,0:12:30.02:0,30,368	1/1:4,6:10:17.98:173,18,0	1/1:5,5:9:2.69:78,3,0	0/0:15,0:15:26.57:0,27,232	0/0:13,0:13:26.90:0,27,209	0/0:24,0:24:47.96:0,48,413	1/1:1,25:26:69.11:669,69,0	0/0:16,0:18:42.07:0,42,549	0/0:15,0:15:38.64:0,39,470	0/0:10,0:10:24.08:0,24,348	1/1:1,5:6:8.21:86,8,0	1/1:2,4:8:5.98:102,6,0	1/1:2,11:14:17.96:224,18,0	1/1:1,17:18:42.06:407,42,0	0/0:14,1:15:4.01:0,4,389	0/0:20,0:22:53.46:0,53,673	0/0:7,0:5:12.03:0,12,157
chr10	92057280	.	A	AT	945.76	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-5.272;DP=494;FS=3.207;HRun=0;HaplotypeScore=73.7733;InbreedingCoeff=0.9460;MQ=75.40;MQ0=8;MQRankSum=1.794;QD=23.64;ReadPosRankSum=2.933;VQSLOD=5.2004;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.08:0,75,909	0/0:4,0:4:8.88:0,9,61	0/0:51,0:24:28.96:0,29,430	0/0:55,0:17:20.45:0,20,161	0/0:17,0:17:30.48:0,30,401	1/1:0,16:16:39.13:505,39,0	1/1:0,10:10:18.06:233,18,0	0/0:35,0:34:90.11:0,90,1015	0/0:9,0:9:26.98:0,27,297	0/0:19,0:19:53.29:0,53,356	0/0:12,0:12:23.69:0,24,155	0/0:13,0:13:35.73:0,36,369	0/0:9,0:9:20.71:0,21,135	0/0:9,0:8:17.79:0,18,118	0/0:12,0:12:29.24:0,29,207	1/1:0,14:14:27.09:349,27,0	0/0:21,0:21:43.26:0,43,299	0/0:26,0:26:70.98:0,71,459	0/0:18,0:18:46.45:0,46,578	0/0:14,0:14:38.66:0,39,470	0/0:11,0:11:27.08:0,27,360	0/0:5,0:5:14.06:0,14,84	0/0:9,0:9:14.47:0,14,124	0/0:13,0:13:29.63:0,30,198	0/0:20,0:20:50.38:0,50,344	0/0:15,0:15:42.02:0,42,497	0/0:19,0:19:42.65:0,43,597	0/0:9,0:7:12.87:0,13,190
chr10	92057283	.	A	AAT	1060.72	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.191;DP=493;FS=3.339;HRun=0;HaplotypeScore=80.6192;InbreedingCoeff=0.9605;MQ=76.64;MQ0=6;MQRankSum=-1.573;QD=27.20;ReadPosRankSum=0.530;VQSLOD=4.5486;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.14:0,72,858	1/1:0,4:4:11.87:131,12,0	0/0:51,0:25:27.95:0,28,352	0/0:55,0:17:29.25:0,29,184	0/0:16,0:16:35.78:0,36,390	0/0:15,0:15:39.01:0,39,351	0/0:11,0:11:21:0,21,187	0/0:39,0:38:86.41:0,86,963	0/0:9,0:9:24:0,24,267	0/0:19,0:19:56.62:0,57,419	0/0:12,0:12:20.84:0,21,147	0/0:12,0:12:35.70:0,36,348	0/0:9,0:9:23.83:0,24,172	0/0:8,0:7:14.90:0,15,108	1/1:1,10:12:26.96:401,27,0	0/0:12,0:12:27:0,27,241	1/1:2,18:23:46.22:668,46,0	0/0:26,0:26:71.44:0,71,502	0/0:19,0:19:44.90:0,45,531	0/0:15,0:15:44.83:0,45,491	0/0:11,0:11:27.08:0,27,348	0/0:5,0:5:12.37:0,12,83	0/0:8,0:8:17.91:0,18,138	0/0:13,0:13:29.79:0,30,214	0/0:21,0:21:50.67:0,51,374	0/0:13,0:13:36.06:0,36,426	0/0:19,0:19:46.69:0,47,566	0/0:8,0:6:17.78:0,18,186
chr10	92057837	.	AAAT	A	2261.93	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.821;DP=695;FS=0.000;HRun=0;HaplotypeScore=107.3970;InbreedingCoeff=0.9943;MQ=82.70;MQ0=0;MQRankSum=-4.110;QD=35.34;ReadPosRankSum=0.629;VQSLOD=3.7854;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.28:0,81,1941	1/1:2,5:7:15.05:227,15,0	0/0:16,0:16:48.16:0,48,1134	0/0:24,0:24:66.23:0,66,1509	0/0:24,0:24:72.25:0,72,1772	0/0:27,0:27:81.26:0,81,1827	0/0:35,0:35:99:0,105,2572	0/0:35,0:35:99:0,105,2515	0/0:28,0:28:84.29:0,84,2044	0/0:30,0:30:90.30:0,90,2106	0/0:16,0:16:48.16:0,48,1167	0/0:30,0:30:90.29:0,90,2109	0/0:24,0:24:72.21:0,72,1628	0/0:21,0:21:63.22:0,63,1551	1/1:8,32:40:99:1572,114,0	0/0:24,0:24:72.25:0,72,1771	1/1:1,16:17:47.96:604,48,0	0/0:17,0:17:51.13:0,51,1153	0/0:30,0:29:90.28:0,90,2061	0/0:19,0:19:57.18:0,57,1312	0/0:37,0:37:99:0,111,2614	0/0:20,0:20:60.21:0,60,1414	0/0:20,0:20:60.20:0,60,1430	0/0:29,0:29:87.27:0,87,2040	0/0:17,0:17:51.18:0,51,1257	0/0:38,0:38:99:0,114,2761	0/0:25,0:25:75.21:0,75,1737	0/0:18,0:18:54.19:0,54,1326
chr10	92057843	.	T	TC	1650.47	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.987;DP=683;FS=4.079;HRun=0;HaplotypeScore=79.6885;InbreedingCoeff=0.9943;MQ=86.30;MQ0=0;MQRankSum=-3.017;QD=30.01;ReadPosRankSum=1.397;VQSLOD=3.6425;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.26:0,81,1114	1/1:0,5:5:15.04:183,15,0	0/0:19,0:19:54.16:0,54,736	0/0:27,0:27:71.95:0,72,905	0/0:25,0:25:75.22:0,75,1003	0/0:26,0:26:78.26:0,78,1090	0/0:35,0:35:99:0,102,1424	0/0:37,0:37:99:0,108,1467	0/0:29,0:29:87.29:0,87,1216	0/0:31,0:31:93.31:0,93,1285	0/0:17,0:17:51.17:0,51,712	0/0:27,0:27:81.26:0,81,1119	0/0:22,0:22:66.22:0,66,922	0/0:21,0:21:63.21:0,63,881	1/1:0,32:32:95.75:1078,96,0	0/0:25,0:25:75.25:0,75,1048	1/1:2,16:18:47.52:530,48,0	0/0:16,0:16:48.10:0,48,631	0/0:30,0:29:90.28:0,90,1240	0/0:20,0:20:60.20:0,60,839	0/0:35,0:35:99:0,105,1452	0/0:19,0:19:57.18:0,57,782	0/0:19,0:19:57.19:0,57,797	0/0:27,0:27:81.27:0,81,1132	0/0:17,0:17:51.17:0,51,713	0/0:38,0:38:99:0,111,1538	0/0:22,0:22:63.19:0,63,848	0/0:17,0:17:51.17:0,51,713
chr10	92059498	.	TGGG	T	12408.09	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=3.883;DP=578;FS=8.534;HRun=9;HaplotypeScore=127.3739;InbreedingCoeff=0.9431;MQ=71.92;MQ0=0;MQRankSum=-6.829;QD=32.06;ReadPosRankSum=5.457;VQSLOD=2.7882;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:54.16:0,54,1047	0/0:1,0:11:13.58:0,14,34	0/0:20,0:19:33.07:0,33,559	0/0:21,0:20:28.80:0,29,705	1/1:5,19:24:39.06:529,39,0	0/0:23,0:23:69.21:0,69,1337	0/0:26,0:26:72.25:0,72,1499	1/1:1,16:18:48.16:677,48,0	1/1:5,23:28:66.21:935,66,0	1/1:4,23:27:66.21:918,66,0	1/1:2,9:11:24.07:340,24,0	1/1:6,20:26:69.22:967,69,0	1/1:2,15:17:36.12:510,36,0	1/1:5,21:26:69.23:970,69,0	0/0:3,0:23:26.31:0,26,79	0/0:13,0:13:36.11:0,36,704	0/0:4,0:30:39.69:0,40,146	1/1:1,24:25:60.20:851,60,0	1/1:7,10:17:33.09:466,33,0	1/1:3,6:9:15.05:213,15,0	1/1:5,23:28:56.35:805,56,0	1/1:2,16:18:1.44:552,1,0	1/1:0,11:11:21.07:298,21,0	1/1:4,22:26:59.75:841,60,0	1/1:7,21:28:66.13:909,66,0	1/1:5,20:25:63.17:862,63,0	1/1:3,18:21:48.15:680,48,0	1/1:0,2:2:6.02:85,6,0
chr10	92059505	.	GGGT	G	6019.22	PASS	AB=0.995;AC=31;AF=0.554;AN=56;BaseQRankSum=13.903;DP=584;FS=3.366;HRun=0;HaplotypeScore=153.0735;InbreedingCoeff=0.4678;MQ=70.96;MQ0=1;MQRankSum=-6.554;QD=15.59;ReadPosRankSum=8.711;VQSLOD=3.7151;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.09:0,69,1055	0/0:11,0:11:8.94:0,9,42	0/0:22,0:21:46.95:0,47,654	0/0:24,0:21:34.45:0,34,709	1/1:22,1:23:14.77:226,15,0	0/0:24,0:24:66.20:0,66,1231	0/0:25,0:25:75.20:0,75,1467	0/1:22,0:22:29.15:284,0,29	1/1:26,2:28:2.64:433,3,0	0/1:27,0:27:25.51:390,0,26	1/1:11,0:11:4.83:152,5,0	1/1:21,5:26:46.47:552,46,0	1/1:16,1:17:13.90:273,14,0	1/1:25,3:28:32.75:547,33,0	0/0:24,0:24:46.30:0,46,189	0/0:13,0:13:36.10:0,36,704	0/0:30,0:30:51.53:0,52,195	0/1:29,0:28:31.31:362,0,31	1/1:12,0:12:8.47:195,8,0	0/1:9,0:9:28.91:93,0,29	1/1:26,1:27:38.31:402,38,0	1/1:18,0:18:29.07:286,29,0	0/1:12,0:12:1:146,0,1	1/1:23,1:24:38.41:436,38,0	0/1:26,1:27:17.44:393,0,17	1/1:21,2:23:36.13:420,36,0	1/1:19,1:20:26.97:394,27,0	0/1:3,0:3:10.99:35,0,11
chr10	92059666	.	AGGCT	A	15516.08	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=11.387;DP=521;FS=2.367;HRun=0;HaplotypeScore=117.4340;InbreedingCoeff=0.9731;MQ=77.02;MQ0=0;MQRankSum=-7.336;QD=39.58;ReadPosRankSum=4.137;VQSLOD=5.3863;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.32:0,93,2395	1/1:1,3:4:9.03:164,9,0	0/0:16,0:16:38.08:0,38,722	0/0:13,0:13:24.08:0,24,485	1/1:6,13:19:32.78:598,33,0	0/0:11,0:11:27.09:0,27,646	0/0:41,0:41:99:0,111,2694	1/1:8,15:23:45.08:632,45,0	1/1:1,14:15:42.14:761,42,0	1/1:1,15:16:45.13:740,45,0	1/1:3,10:13:21.07:381,21,0	1/1:1,16:17:39.13:708,39,0	1/1:2,20:22:54.19:976,54,0	1/1:2,13:15:36.07:618,36,0	1/1:1,22:23:51.17:927,51,0	0/0:15,0:15:45.15:0,45,1091	1/1:3,25:28:63.22:1145,63,0	1/1:2,29:31:69.24:1254,69,0	1/1:3,9:12:30.03:439,30,0	1/1:5,11:16:42.03:671,42,0	1/1:2,22:23:42.14:738,42,0	1/1:3,13:16:39.13:706,39,0	1/1:4,8:12:8.33:162,8,0	1/1:1,25:26:54.18:981,54,0	1/1:1,10:11:27.09:490,27,0	1/1:1,17:19:54.19:979,54,0	1/1:1,17:18:45.15:791,45,0	1/1:0,12:12:36.12:654,36,0
chr10	92059672	.	GCT	G	4241.80	PASS	AB=0.975;AC=35;AF=0.625;AN=56;BaseQRankSum=15.893;DP=500;FS=1.185;HRun=0;HaplotypeScore=131.3120;InbreedingCoeff=0.3159;MQ=77.09;MQ0=0;MQRankSum=-9.815;QD=11.40;ReadPosRankSum=8.038;VQSLOD=3.8580;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.33:0,96,1838	0/1:4,0:4:26.31:38,0,26	0/0:16,0:16:46.19:0,46,635	0/0:12,0:12:24.08:0,24,422	1/1:15,1:16:31.96:194,32,0	0/0:10,0:10:27.09:0,27,522	0/0:43,0:43:99:0,126,2260	0/1:16,0:16:54.42:115,0,54	0/1:16,0:16:29.20:179,0,29	1/1:15,0:15:34.01:244,34,0	1/1:10,0:10:20.32:114,20,0	1/1:16,0:16:37.73:211,38,0	1/1:22,1:23:17.19:252,17,0	0/1:14,0:14:19.25:141,0,19	1/1:22,0:22:49.37:278,49,0	0/0:15,0:15:45.15:0,45,861	1/1:26,0:25:26.10:307,26,0	0/1:30,0:30:37.88:299,0,38	0/1:9,1:10:0.45:135,0,0	1/1:11,4:15:2.54:197,3,0	1/1:23,0:23:40.21:242,40,0	0/1:16,1:17:14.33:181,0,14	1/1:8,2:10:8.79:54,9,0	1/1:26,0:26:52.31:297,52,0	0/1:11,1:12:8.83:121,0,9	0/1:20,0:20:17.60:234,0,18	1/1:19,0:19:8.77:214,9,0	1/1:12,0:12:34.83:195,35,0
chr10	92059781	.	AG	A	1565.04	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.467;DP=586;FS=0.000;HRun=3;HaplotypeScore=76.8054;InbreedingCoeff=0.9467;MQ=87.65;MQ0=0;MQRankSum=-0.953;QD=30.69;ReadPosRankSum=4.100;VQSLOD=3.5424;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.15:0,87,1165	1/1:0,3:3:6.02:74,6,0	0/0:28,0:28:83.97:0,84,1056	0/0:17,0:17:49.28:0,49,606	0/0:24,0:24:44.82:0,45,629	0/0:16,0:16:45.11:0,45,578	0/0:31,0:31:90.17:0,90,1210	0/0:27,0:27:81.27:0,81,1150	0/0:19,0:19:57.19:0,57,820	0/0:19,0:19:54.16:0,54,728	0/0:8,0:8:18.04:0,18,240	0/0:23,0:23:66.20:0,66,914	0/0:22,0:22:66.02:0,66,818	0/0:26,0:26:72.22:0,72,1001	1/1:0,20:20:54.17:669,54,0	0/0:20,0:20:57.18:0,57,803	1/1:1,27:28:41.08:956,41,0	0/0:36,0:36:99:0,105,1416	0/0:21,0:21:60.11:0,60,805	0/0:10,0:10:24.08:0,24,340	0/0:33,0:33:84.08:0,84,1120	0/0:15,0:15:36.06:0,36,477	0/0:9,0:9:27.03:0,27,330	0/0:31,0:31:90.21:0,90,1247	0/0:16,0:16:48.13:0,48,668	0/0:23,0:23:57.18:0,57,801	0/0:25,0:25:75.24:0,75,1059	0/0:6,0:6:12.04:0,12,172
chr10	92060293	.	G	GCGGCGGT	34344.24	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=16.729;DP=644;FS=6.739;HRun=0;HaplotypeScore=217.1438;InbreedingCoeff=0.9800;MQ=72.51;MQ0=0;MQRankSum=-18.704;QD=81.97;ReadPosRankSum=-3.412;VQSLOD=3.6141;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,2822	0/0:9,0:9:24.08:0,24,637	0/0:21,0:21:60.21:0,60,1519	0/0:16,0:16:36.12:0,36,798	1/1:7,12:20:18.06:733,18,0	0/0:24,0:24:69.23:0,69,1806	0/0:27,0:27:78.27:0,78,2052	1/1:21,6:28:84.24:2672,84,0	1/1:8,16:25:66.18:2521,66,0	1/1:9,11:23:63.21:2183,63,0	1/1:4,5:10:5.98:141,6,0	1/1:9,24:35:93.28:3416,93,0	1/1:10,17:28:78.27:2989,78,0	1/1:9,17:27:75.18:2664,75,0	0/0:31,0:31:90.28:0,90,2315	0/0:31,0:31:93.32:0,93,2453	0/0:29,0:29:84.29:0,84,2265	1/1:9,14:25:56.56:2154,57,0	1/1:7,12:22:57.17:1910,57,0	1/1:7,8:19:33.11:1159,33,0	1/1:12,9:26:30.10:1122,30,0	1/1:5,6:12:18.06:663,18,0	1/1:9,5:15:33.11:1145,33,0	1/1:11,17:29:63.22:2392,63,0	1/1:5,14:19:48.16:1795,48,0	1/1:9,13:24:60.17:2085,60,0	1/1:9,11:23:48.08:1751,48,0	1/1:4,5:9:21.07:851,21,0
chr10	92062364	.	C	CACTAGT	42738.64	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-6.941;DP=765;FS=11.479;HRun=0;HaplotypeScore=150.1943;InbreedingCoeff=0.9950;MQ=76.62;MQ0=0;MQRankSum=-21.302;QD=87.40;ReadPosRankSum=-1.253;VQSLOD=5.8801;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,172,3924	0/0:17,0:17:48.16:0,48,1154	0/0:26,0:26:75.25:0,75,1694	0/0:23,0:23:62.67:0,63,1304	1/1:2,19:23:54.04:1841,54,0	0/0:28,0:28:84.27:0,84,1951	0/0:19,0:19:57.16:0,57,1269	1/1:20,12:34:96.24:2940,96,0	1/1:5,28:34:93.31:3255,93,0	1/1:10,27:40:99:3632,114,0	1/1:6,11:17:39.13:1292,39,0	1/1:8,24:32:81.28:2850,81,0	1/1:7,25:32:78.27:2777,78,0	1/1:2,22:26:66.23:2366,66,0	0/0:31,0:31:93.31:0,93,2160	0/0:36,0:36:99:0,102,2404	0/0:37,0:37:99:0,105,2420	1/1:8,8:17:33.11:1140,33,0	1/1:9,9:19:51.17:1628,51,0	1/1:9,26:36:99:3556,102,0	1/1:8,16:27:48.16:1563,48,0	1/1:4,23:28:75.26:2654,75,0	1/1:3,18:21:60.21:2123,60,0	1/1:2,11:16:27.09:865,27,0	1/1:1,23:24:69.24:2441,69,0	1/1:2,22:25:75.21:2572,75,0	1/1:6,23:30:81.28:2828,81,0	1/1:4,1:8:12.04:417,12,0
chr10	92063208	.	G	GAAAA	10773.98	PASS	AB=0.990;AC=47;AF=0.839;AN=56;BaseQRankSum=8.301;DP=708;FS=0.000;HRun=14;HaplotypeScore=204.9292;InbreedingCoeff=0.6293;MQ=65.93;MQ0=3;MQRankSum=-8.044;QD=17.90;ReadPosRankSum=-6.164;VQSLOD=-0.3248;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:55:67.56:0,68,879	1/1:2,8:11:9.03:196,9,0	0/1:33,0:20:13.40:13,0,83	0/0:29,0:18:13.47:0,13,111	1/1:21,0:29:45.08:640,45,0	0/1:18,0:18:9.29:9,0,301	0/0:18,0:22:38.09:0,38,389	1/1:29,0:27:44.38:470,44,0	1/1:16,0:16:39.05:505,39,0	1/1:34,0:31:62.93:742,63,0	1/1:31,0:30:47.90:560,48,0	1/1:24,0:22:48.05:630,48,0	1/1:18,0:18:22.87:293,23,0	1/1:20,0:19:11.80:154,12,0	1/1:28,0:32:66.04:938,66,0	0/1:27,0:29:5.88:6,0,453	1/1:5,24:31:12.04:243,12,0	1/1:34,0:33:32.92:411,33,0	1/1:19,0:17:27.44:365,27,0	1/1:25,0:25:54.02:738,54,0	1/1:23,0:22:26.97:340,27,0	1/1:25,0:24:49.69:689,50,0	1/1:13,0:13:30.35:399,30,0	1/1:15,0:15:21.39:228,21,0	1/1:20,0:19:35.40:401,35,0	1/1:32,0:28:65.99:826,66,0	1/1:21,0:21:38.98:537,39,0	1/1:17,0:16:33.03:442,33,0
chr10	92063655	.	GAC	G	549.48	PASS	AB=0.984;AC=22;AF=0.407;AN=54;BaseQRankSum=6.395;DP=545;FS=32.648;HRun=0;HaplotypeScore=124.0664;InbreedingCoeff=-0.1547;MQ=57.33;MQ0=9;MQRankSum=0.766;QD=1.56;ReadPosRankSum=2.439;VQSLOD=0.5673;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:57.17:0,57,824	./.	0/0:24,0:15:4.34:0,4,25	0/0:22,0:17:8.24:0,8,96	0/1:11,0:10:11.52:15,0,12	0/1:22,3:26:71.57:72,0,458	0/1:35,3:39:99:107,0,785	0/0:20,0:19:11.58:0,12,62	1/1:25,0:25:8.02:55,8,0	0/0:21,0:21:23.48:0,23,345	0/0:10,0:10:9.02:0,9,104	1/1:32,0:32:1.02:69,1,0	0/1:12,0:10:10.27:10,0,87	0/1:27,0:26:16.73:17,0,117	0/1:28,0:28:7.12:7,0,44	0/1:25,0:25:73.94:74,0,532	0/0:14,0:14:11.03:0,11,61	0/1:15,0:15:1.92:82,0,2	0/1:16,0:16:9.43:14,0,9	0/1:14,0:14:13.88:23,0,14	0/1:24,0:23:6:6,0,19	0/1:18,0:18:23.23:23,0,29	0/1:7,0:7:14.95:15,0,40	0/0:31,0:31:18.48:0,18,222	0/0:13,0:12:3.63:0,4,84	0/1:21,0:21:30.63:31,0,53	1/1:10,0:10:1.48:63,1,0	1/1:3,0:3:5.42:23,5,0
chr10	92063681	.	CACACAT	C	2943.84	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=4.737;DP=652;FS=9.527;HRun=0;HaplotypeScore=219.8174;InbreedingCoeff=0.0667;MQ=43.96;MQ0=22;MQRankSum=-6.332;QD=6.09;ReadPosRankSum=-6.111;VQSLOD=-0.2432;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:83.49:0,83,1903	1/1:5,0:5:5.92:41,6,0	0/1:26,0:12:35.79:36,0,36	0/0:31,0:9:10.41:0,10,130	1/1:12,0:11:6.43:26,6,0	0/0:26,0:26:14.25:0,14,1352	0/0:45,0:46:99:0,99,2243	1/1:33,0:28:52.24:429,52,0	1/1:24,1:25:41.77:362,42,0	0/1:29,0:28:99:167,0,464	0/1:9,0:9:12.91:13,0,195	1/1:33,3:36:17.20:378,17,0	0/1:24,0:22:77.75:78,0,270	0/1:24,0:23:61.85:62,0,227	0/1:30,0:30:38.22:38,0,93	0/0:32,0:33:57.56:0,58,1529	0/1:18,0:17:53.14:59,0,53	0/1:13,0:13:76.75:77,0,103	1/1:13,0:12:16.17:116,16,0	1/1:12,0:12:16.56:101,17,0	1/1:30,0:29:7.81:60,8,0	0/1:19,0:19:45.24:45,0,113	0/1:11,0:11:45.92:46,0,129	0/1:29,0:29:46.67:47,0,303	0/1:25,0:24:4.73:5,0,205	1/1:30,0:29:8.58:386,9,0	1/1:23,1:23:57.92:458,58,0	1/1:4,1:4:8.72:100,9,0
chr10	92063683	.	CACAT	C	5119.65	PASS	AB=0.981;AC=34;AF=0.607;AN=56;BaseQRankSum=5.269;DP=664;FS=15.554;HRun=0;HaplotypeScore=202.9232;InbreedingCoeff=0.0537;MQ=43.64;MQ0=22;MQRankSum=-3.908;QD=10.41;ReadPosRankSum=-5.243;VQSLOD=1.3904;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:86.08:0,86,1521	1/1:5,0:5:5.94:42,6,0	0/1:27,0:13:32.89:33,0,55	0/0:31,0:8:10.29:0,10,131	1/1:9,3:11:6.49:114,6,0	0/0:25,0:25:46.81:0,47,1059	0/0:48,0:48:81.98:0,82,1761	1/1:36,0:30:82.08:531,82,0	1/1:20,6:26:53.64:589,54,0	0/1:30,2:31:99:259,0,246	0/1:10,0:10:34.84:35,0,114	1/1:30,6:36:56.73:668,57,0	0/1:24,0:22:99:147,0,112	0/1:25,0:24:99:109,0,126	0/1:29,0:29:21.85:60,0,22	0/0:35,0:35:57.93:0,58,1167	0/1:18,0:17:23.62:78,0,24	0/1:11,2:13:23.51:220,0,24	1/1:13,0:12:19.89:224,20,0	1/1:8,4:12:20.97:260,21,0	1/1:25,5:29:6.99:104,7,0	0/1:19,0:19:32.41:60,0,32	0/1:12,0:12:42.84:52,0,43	0/1:27,0:27:72.27:72,0,190	0/1:26,1:26:82.25:125,0,82	1/1:27,3:29:43.93:660,44,0	1/1:20,4:23:63.04:565,63,0	1/1:4,1:4:8.99:112,9,0
chr10	92063685	.	CAT	C	4916.90	PASS	AB=0.991;AC=41;AF=0.732;AN=56;BaseQRankSum=7.599;DP=662;FS=16.779;HRun=0;HaplotypeScore=188.5350;InbreedingCoeff=0.2962;MQ=44.48;MQ0=21;MQRankSum=-5.469;QD=9.38;ReadPosRankSum=-2.837;VQSLOD=3.1177;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.57:0,85,1091	1/1:5,0:5:5.94:42,6,0	0/1:25,0:10:33.51:34,0,55	0/0:32,0:10:13.20:0,13,150	1/1:11,1:11:4.09:45,4,0	0/0:25,0:25:16.06:0,16,679	0/0:49,0:49:81.89:0,82,1323	1/1:39,0:33:89.11:609,89,0	1/1:26,0:26:53.18:378,53,0	0/1:33,0:32:31.18:347,0,31	0/1:10,0:10:19.18:38,0,19	1/1:32,3:35:56.25:413,56,0	1/1:23,1:22:10.31:252,10,0	0/1:25,1:25:34.95:161,0,35	1/1:28,1:29:10.25:147,10,0	0/1:34,1:35:5.52:6,0,758	1/1:17,0:16:14.38:99,14,0	1/1:10,3:13:33.32:318,33,0	1/1:12,1:12:20.20:170,20,0	1/1:10,0:10:20.91:163,21,0	1/1:29,0:28:7.67:72,8,0	1/1:16,1:18:17.85:203,18,0	1/1:12,1:13:0.17:127,0,0	0/1:26,0:26:50.70:96,0,51	0/1:26,0:26:8.47:177,0,8	1/1:30,0:29:72.41:543,72,0	1/1:24,0:23:60.51:412,61,0	1/1:5,0:4:8.94:66,9,0
chr10	92063687	.	TAC	T	473.71	PASS	AB=0.965;AC=21;AF=0.375;AN=56;BaseQRankSum=8.346;DP=675;FS=44.034;HRun=0;HaplotypeScore=212.5255;InbreedingCoeff=0.0905;MQ=44.22;MQ0=23;MQRankSum=-2.059;QD=1.43;ReadPosRankSum=3.341;VQSLOD=1.3697;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:59.72:0,60,1118	0/0:3,0:3:0.47:0,0,1	0/0:28,0:10:19.47:0,19,190	0/0:34,0:9:18.03:0,18,240	0/1:13,0:12:11.57:14,0,12	0/0:25,0:25:59.48:0,59,810	0/0:51,0:51:99:0,117,1644	0/0:39,0:33:12.65:0,13,78	1/1:27,0:27:9.49:54,9,0	0/0:33,0:31:19.48:0,19,317	0/0:10,0:10:9.02:0,9,104	1/1:37,0:37:20.50:92,20,0	0/1:24,0:22:13.50:14,0,88	0/1:28,0:27:21.79:22,0,127	0/1:23,5:28:42.10:60,0,42	0/0:33,1:34:1.69:0,2,821	0/1:10,5:15:19.80:113,0,20	0/1:13,0:13:9.25:74,0,9	0/1:14,0:13:9.44:14,0,9	1/1:11,0:11:8.03:34,8,0	1/1:28,0:27:1.43:10,1,0	0/1:19,0:19:14.64:15,0,38	0/1:14,0:14:12.46:12,0,50	0/0:26,0:26:15.50:0,15,199	0/0:27,0:27:3.10:0,3,83	0/1:30,0:29:29.53:30,0,55	0/1:24,0:23:0.52:61,0,1	1/1:5,0:4:4.89:22,5,0
chr10	92063700	.	ACT	A	220.57	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=2.762;DP=688;FS=61.543;HRun=0;HaplotypeScore=247.2651;InbreedingCoeff=0.2058;MQ=46.28;MQ0=20;MQRankSum=-0.869;QD=1.23;ReadPosRankSum=-0.654;VQSLOD=0.6274;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:56.08:0,56,1376	1/1:5,0:5:2.58:17,3,0	0/0:34,0:11:25.12:0,25,306	0/0:40,0:13:21.95:0,22,282	0/0:10,1:11:5.62:0,6,28	0/0:28,0:28:47.13:0,47,1017	0/0:49,0:49:99:0,129,2150	0/0:47,0:42:70.42:0,70,817	0/1:28,0:28:4.20:4,0,218	0/0:31,0:30:23.19:0,23,625	0/0:8,0:8:11.98:0,12,130	0/0:31,2:33:21.75:0,22,194	0/0:24,0:22:21.95:0,22,217	0/1:26,0:26:28.13:28,0,169	1/1:32,0:32:7.89:135,8,0	0/0:36,0:36:38.19:0,38,1204	1/1:17,0:16:9.79:85,10,0	0/1:13,0:13:12.24:12,0,109	0/0:17,1:18:13.34:0,13,256	0/0:11,0:11:6.49:0,6,58	0/0:25,0:25:5.44:0,5,34	0/1:17,0:17:39.77:40,0,61	0/1:14,0:14:10.40:10,0,112	0/0:25,0:25:2.07:0,2,241	0/0:25,0:25:2.08:0,2,242	0/1:27,0:26:35.93:36,0,281	0/0:25,0:24:56.96:0,57,349	0/0:6,0:5:13.75:0,14,73
chr10	92063709	.	CACACAA	C	1031.26	PASS	AB=0.950;AC=15;AF=0.268;AN=56;BaseQRankSum=9.551;DP=712;FS=21.839;HRun=0;HaplotypeScore=300.7721;InbreedingCoeff=-0.1498;MQ=46.80;MQ0=19;MQRankSum=-9.451;QD=4.11;ReadPosRankSum=-10.014;VQSLOD=-0.5463;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:71.09:0,71,2457	1/1:4,2:6:5:52,5,0	0/0:46,0:16:37.92:0,38,713	0/0:48,0:16:27.66:0,28,716	0/1:9,0:9:1.58:30,0,2	0/0:31,0:31:64.36:0,64,1743	0/0:49,0:49:99:0,120,3250	0/0:43,0:40:75.51:0,76,2098	0/1:29,0:29:23.40:23,0,925	0/0:28,0:27:43.77:0,44,1147	0/1:9,0:9:14.04:14,0,221	0/0:36,0:36:5.20:0,5,916	0/1:27,0:25:42.62:43,0,641	0/1:22,0:22:58.22:58,0,317	0/1:16,16:32:67.20:245,0,67	0/0:38,0:38:90.26:0,90,2707	0/1:9,8:16:33.18:531,0,33	0/1:10,0:10:1.77:2,0,160	0/0:21,0:21:54.75:0,55,973	0/1:11,0:10:1.10:1,0,200	0/0:23,0:23:1.44:0,1,106	0/1:16,0:16:62.72:63,0,357	0/1:13,0:13:15.48:15,0,361	0/1:25,0:25:40.50:40,0,449	0/1:25,0:25:63.76:64,0,585	0/0:30,0:30:43.35:0,43,949	0/0:26,0:24:70.78:0,71,1130	0/0:6,0:6:17.72:0,18,227
chr10	92063719	.	C	CAT	10202.91	PASS	AB=0.773;AC=38;AF=0.679;AN=56;BaseQRankSum=10.298;DP=723;FS=7.624;HRun=0;HaplotypeScore=256.9676;InbreedingCoeff=0.6581;MQ=45.58;MQ0=22;MQRankSum=-8.167;QD=23.14;ReadPosRankSum=-3.204;VQSLOD=3.4694;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.43:0,87,1181	1/1:5,0:5:0.94:2,1,0	0/0:63,0:17:36.90:0,37,432	0/0:55,0:18:23.38:0,23,343	1/1:4,2:6:5.59:87,6,0	0/0:32,0:32:69.15:0,69,926	0/0:47,0:47:99:0,114,1523	1/1:28,14:42:50.73:869,51,0	1/1:9,19:28:43.95:803,44,0	1/1:12,10:22:28.64:785,29,0	1/1:6,4:10:8.03:197,8,0	1/1:15,23:39:41.52:966,42,0	1/1:9,18:26:62.33:1016,62,0	1/1:8,12:21:40.04:730,40,0	0/1:33,0:33:2.64:3,0,33	0/0:37,0:37:99:0,99,1357	0/0:16,0:15:17.92:0,18,126	1/1:4,3:7:8.71:172,9,0	0/1:12,6:18:14.39:341,0,14	1/1:7,6:12:21.02:280,21,0	1/1:12,11:23:14.65:213,15,0	0/1:7,8:15:8.32:390,0,8	1/1:5,9:14:29.58:450,30,0	1/1:13,13:26:22.84:548,23,0	1/1:9,18:27:51.08:866,51,0	0/1:17,14:31:16.42:614,0,16	1/1:14,12:25:45.66:696,46,0	1/1:5,2:7:17.90:175,18,0
chr10	92063744	.	TCACACACA	T	15164.38	PASS	AB=0.705;AC=42;AF=0.750;AN=56;BaseQRankSum=8.077;DP=673;FS=6.585;HRun=0;HaplotypeScore=261.9717;InbreedingCoeff=0.7850;MQ=46.33;MQ0=14;MQRankSum=-11.734;QD=34.31;ReadPosRankSum=-2.655;VQSLOD=2.8467;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:72.21:0,72,2685	1/1:1,4:5:12.04:277,12,0	0/0:56,0:15:18.04:0,18,578	0/0:43,0:14:14.72:0,15,310	1/1:2,9:11:18.53:288,19,0	0/0:5,0:22:39.12:0,39,818	0/0:15,0:35:51.13:0,51,1027	0/1:20,7:25:91.33:523,0,91	1/1:7,27:34:67.91:1645,68,0	1/1:10,12:22:39.11:943,39,0	1/1:2,6:7:6.02:100,6,0	1/1:12,28:40:81.09:1754,81,0	1/1:6,19:24:57.08:1375,57,0	1/1:2,21:23:50.07:1052,50,0	1/1:7,17:24:41.32:672,41,0	0/0:10,0:42:69.21:0,69,1429	1/1:9,11:20:17.32:430,17,0	0/1:3,5:8:6.69:376,0,7	1/1:13,8:21:21.07:491,21,0	1/1:3,8:10:20.90:405,21,0	1/1:20,9:28:15.15:276,15,0	1/1:7,6:13:15.05:327,15,0	1/1:7,7:14:23.53:466,24,0	1/1:12,14:26:15.95:313,16,0	1/1:11,14:26:28.72:522,29,0	1/1:9,18:27:54.18:1359,54,0	1/1:4,16:20:39.26:1053,39,0	1/1:1,6:7:21.07:517,21,0
chr10	92064010	.	AATAC	A	679.52	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-2.980;DP=698;FS=17.424;HRun=0;HaplotypeScore=175.6164;InbreedingCoeff=0.7205;MQ=63.62;MQ0=6;MQRankSum=1.793;QD=12.58;ReadPosRankSum=2.689;VQSLOD=2.2855;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:33.07:0,33,569	1/1:10,0:10:21.07:330,21,0	0/0:22,0:20:7.77:0,8,58	0/0:25,0:22:3.01:0,3,39	0/0:24,0:24:23.94:0,24,191	0/0:20,0:18:24.42:0,24,193	0/0:41,0:41:17.66:0,18,135	0/0:51,0:51:54.16:0,54,480	0/0:27,0:27:32.44:0,32,273	0/0:29,0:27:28.05:0,28,321	0/0:9,0:9:6:0,6,56	0/0:30,0:30:32.33:0,32,276	0/0:22,0:22:0.47:0,0,1	0/0:18,0:18:20.84:0,21,161	1/1:13,12:24:15.05:231,15,0	0/0:34,0:34:47.89:0,48,390	1/1:8,11:19:18.06:254,18,0	0/0:21,0:21:22.28:0,22,228	0/0:18,0:18:18:0,18,160	0/0:28,0:27:32.95:0,33,278	0/0:44,0:44:36.36:0,36,285	0/0:15,0:15:6.90:0,7,63	0/0:11,0:11:3:0,3,27	0/0:37,0:37:15.01:0,15,211	0/0:11,0:11:3.01:0,3,30	0/0:25,0:25:23.56:0,24,226	0/0:29,0:29:23.66:0,24,157	0/0:14,0:14:24.04:0,24,171
chr10	92064026	.	C	CATAC	4756.84	PASS	AB=1.000;AC=46;AF=0.852;AN=54;BaseQRankSum=-1.444;DP=654;FS=10.389;HRun=0;HaplotypeScore=165.3527;InbreedingCoeff=0.4614;MQ=53.44;MQ0=15;MQRankSum=0.355;QD=8.04;ReadPosRankSum=-0.138;VQSLOD=3.6057;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:32:27.03:0,27,349	0/0:10,0:9:19.88:0,20,241	0/1:14,0:12:0.97:1,0,9	./.	1/1:23,0:23:19.67:183,20,0	1/1:19,0:17:15.01:140,15,0	1/1:35,0:35:11.73:99,12,0	1/1:50,0:49:9.87:94,10,0	0/1:26,0:26:16.22:178,0,16	1/1:25,0:22:28.26:504,28,0	1/1:8,0:8:6.02:120,6,0	1/1:33,0:33:30.23:236,30,0	1/1:15,8:24:11.91:92,12,0	1/1:22,0:22:18.05:314,18,0	0/1:20,0:19:6.62:7,0,64	1/1:33,0:33:36.01:353,36,0	0/1:18,0:17:10.67:11,0,51	1/1:25,0:24:20.02:298,20,0	1/1:16,0:16:18.02:166,18,0	1/1:27,0:26:35.18:283,35,0	1/1:51,0:50:25.70:201,26,0	1/1:9,0:9:12.02:211,12,0	1/1:10,0:8:6.02:118,6,0	1/1:31,0:30:18.02:323,18,0	1/1:10,0:10:6.02:120,6,0	1/1:27,0:26:29.98:290,30,0	1/1:23,0:23:26.87:214,27,0	1/1:13,0:13:23.92:202,24,0
chr10	92064052	.	TACATACACAC	T	1560.92	PASS	AB=0.744;AC=8;AF=0.154;AN=52;BaseQRankSum=-5.107;DP=620;FS=17.491;HRun=0;HaplotypeScore=217.0634;InbreedingCoeff=-0.2226;MQ=45.85;MQ0=26;MQRankSum=-7.016;QD=6.05;ReadPosRankSum=-1.603;VQSLOD=1.3028;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:24:0,24,417	0/0:14,0:13:11.77:0,12,66	./.	./.	0/0:15,7:20:23.48:0,23,225	0/0:22,0:20:27.46:0,27,298	0/0:30,0:30:26.94:0,27,365	0/1:42,0:40:91.13:363,0,91	0/1:27,0:27:99:430,0,219	0/0:22,0:19:50.68:0,51,746	0/0:10,0:8:3:0,3,25	0/1:14,16:30:99:125,0,262	0/0:20,0:19:9.03:0,9,313	0/0:20,0:20:35.90:0,36,754	0/0:23,0:22:7.24:0,7,491	0/0:34,0:34:50.91:0,51,569	0/0:24,0:23:10.43:0,10,808	0/0:25,0:24:59.91:0,60,1344	0/1:10,9:17:93.35:139,0,93	0/1:16,12:27:24.40:24,0,218	0/1:26,33:54:40.98:41,0,204	0/0:5,0:4:5.99:0,6,50	0/0:10,0:6:6:0,6,98	0/0:31,0:30:36.06:0,36,927	0/0:9,0:8:3:0,3,25	0/1:12,18:29:99:511,0,203	0/1:11,12:23:58.31:58,0,150	0/0:11,2:13:24.81:0,25,241
chr10	92064056	.	T	TAC	260.92	PASS	AB=1.000;AC=22;AF=0.500;AN=44;BaseQRankSum=5.097;DP=641;FS=6.127;HRun=0;HaplotypeScore=186.1639;InbreedingCoeff=-0.0009;MQ=45.53;MQ0=27;MQRankSum=-1.078;QD=0.63;ReadPosRankSum=0.921;VQSLOD=2.4365;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:22:9.16:15,0,9	0/1:14,0:13:0:0,0,0	./.	./.	./.	0/1:22,0:20:22.92:58,0,23	0/1:32,0:32:51.66:52,0,52	0/1:37,0:35:0:0,0,0	0/1:26,0:26:11.68:55,0,12	0/1:28,0:24:14.95:15,0,27	./.	1/1:31,0:31:8.24:57,8,0	0/0:22,0:22:0.77:0,1,3	0/0:23,0:23:8.97:0,9,95	0/0:23,0:22:15.02:0,15,151	0/0:27,9:38:2.69:0,3,32	0/0:26,0:25:23.91:0,24,249	0/1:23,0:23:30.79:31,0,204	./.	1/1:28,0:28:1.55:5,2,0	1/1:58,0:51:2.22:7,2,0	./.	0/1:14,0:10:18.02:18,0,25	0/0:36,0:35:18.03:0,18,191	1/1:11,0:10:2.65:12,3,0	0/1:31,0:30:29.07:29,0,42	1/1:21,0:22:5.69:25,6,0	1/1:11,0:12:2.80:13,3,0
chr10	92064059	.	A	ATG	882.39	PASS	AB=0.973;AC=12;AF=0.231;AN=52;BaseQRankSum=7.674;DP=636;FS=1.468;HRun=0;HaplotypeScore=177.5716;InbreedingCoeff=0.1112;MQ=45.36;MQ0=28;MQRankSum=0.844;QD=3.21;ReadPosRankSum=2.461;VQSLOD=2.6081;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:22:24.05:0,24,325	0/0:15,0:14:20.90:0,21,327	./.	./.	0/1:20,0:18:15.18:15,0,61	0/0:20,0:18:12.33:0,12,128	0/0:31,0:31:16.89:0,17,250	0/0:32,0:30:71.30:0,71,808	0/1:21,7:28:52.64:352,0,53	0/0:26,0:22:23.02:0,23,367	0/1:9,0:7:13.95:14,0,40	1/1:28,2:30:10.60:141,11,0	0/0:23,0:22:19.52:0,20,213	0/0:25,0:25:31.24:0,31,424	0/0:22,0:21:30.09:0,30,437	0/1:38,0:38:10.11:10,0,173	0/0:26,0:25:44.84:0,45,637	0/0:24,0:23:31.97:0,32,524	0/0:21,0:19:21.91:0,22,207	1/1:28,0:27:6.69:62,7,0	0/1:58,1:52:3.12:54,0,3	0/0:8,0:7:3.01:0,3,41	0/0:14,0:10:5.54:0,6,71	0/0:37,0:36:36.08:0,36,520	0/0:12,0:11:9.38:0,9,101	0/1:29,0:28:31.99:287,0,32	0/1:23,0:23:28.98:79,0,29	0/1:11,0:11:16:16,0,35
chr10	92064322	.	A	AT	1617.73	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=-8.666;DP=596;FS=6.547;HRun=9;HaplotypeScore=80.2190;InbreedingCoeff=0.6669;MQ=84.92;MQ0=0;MQRankSum=-0.250;QD=17.78;ReadPosRankSum=1.449;VQSLOD=3.8895;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,149,1267	1/1:1,17:18:42.11:465,42,0	0/0:29,0:29:53.94:0,54,463	0/0:22,0:22:35.43:0,35,338	0/0:22,0:22:62.91:0,63,538	0/0:27,0:26:74.98:0,75,651	0/0:20,0:20:50.95:0,51,435	0/0:30,0:30:77.90:0,78,663	0/0:24,0:24:62.97:0,63,543	0/0:22,0:22:41.75:0,42,332	0/0:13,0:13:12.51:0,13,95	0/0:33,1:35:58.79:0,59,721	0/1:7,0:7:12.54:13,0,55	0/0:9,0:9:7.10:0,7,54	1/1:3,21:24:40.08:656,40,0	0/0:23,0:23:50.87:0,51,427	1/1:2,20:22:57.15:631,57,0	0/0:7,0:7:11.97:0,12,103	0/0:20,0:20:50.98:0,51,443	0/0:22,0:22:32.47:0,32,435	0/0:18,0:18:47.99:0,48,417	0/0:18,0:18:38.37:0,38,259	0/0:13,0:13:3.77:0,4,135	0/0:5,0:5:2.97:0,3,20	0/1:20,0:20:0.38:0,0,210	0/0:31,0:31:83.97:0,84,726	0/0:28,0:28:80.96:0,81,699	0/0:15,0:15:44.99:0,45,391
chr10	92065143	.	TGGACTGGAGCCTCCCAATG	T	5060.39	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.364;DP=683;FS=8.176;HRun=0;HaplotypeScore=333.7032;InbreedingCoeff=0.9911;MQ=82.89;MQ0=0;MQRankSum=-9.654;QD=92.01;ReadPosRankSum=1.847;VQSLOD=3.4924;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,160,13586	1/1:2,5:7:15.05:823,15,0	0/0:14,0:14:39.13:0,39,1872	0/0:27,0:27:69.23:0,69,3792	0/0:11,0:11:30.10:0,30,2438	0/0:23,0:23:69.22:0,69,5530	0/0:24,0:24:69.24:0,69,6074	0/0:27,0:27:81.28:0,81,5988	0/0:25,0:25:75.26:0,75,6333	0/0:29,0:29:87.30:0,87,7436	0/0:13,0:13:39.13:0,39,3191	0/0:40,0:40:99:0,120,9763	0/0:19,0:19:57.20:0,57,4715	0/0:34,0:34:99:0,102,8915	1/1:4,29:33:63.69:3215,64,0	0/0:20,0:20:60.21:0,60,5127	1/1:6,9:15:21.07:1022,21,0	0/0:26,0:26:75.26:0,75,6202	0/0:23,0:23:69.24:0,69,4898	0/0:12,0:12:36.12:0,36,3068	0/0:62,0:62:99:0,187,14524	0/0:21,0:21:63.22:0,63,4955	0/0:14,0:14:39.13:0,39,3251	0/0:35,0:35:99:0,105,8376	0/0:19,0:19:57.20:0,57,5019	0/0:29,0:29:87.30:0,87,7249	0/0:20,0:20:57.20:0,57,5067	0/0:7,0:7:21.07:0,21,1803
chr10	92065579	.	C	CGCTT	11863.39	PASS	AB=0.582;AC=11;AF=0.196;AN=56;BaseQRankSum=-11.338;DP=748;FS=21.289;HRun=0;HaplotypeScore=124.7044;InbreedingCoeff=0.1808;MQ=55.46;MQ0=9;MQRankSum=-2.473;QD=47.84;ReadPosRankSum=1.592;VQSLOD=4.1375;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:55:99:0,151,2656	0/0:13,0:13:33.11:0,33,587	0/0:6,0:2:3.01:0,3,53	0/0:8,0:4:12:0,12,159	0/0:27,0:27:72.25:0,72,1279	0/0:15,0:15:39.13:0,39,694	0/0:38,0:36:99:0,105,1830	0/0:34,0:34:81.26:0,81,1401	0/0:26,0:26:75.20:0,75,1246	0/1:13,16:30:99:1305,0,147	0/1:7,18:25:99:1004,0,144	0/0:26,0:26:72.25:0,72,1267	0/1:2,16:19:58.55:1035,0,59	0/1:5,23:30:34.27:1621,0,34	0/0:32,0:31:84.29:0,84,1482	0/0:31,0:31:84.29:0,84,1495	0/0:35,0:35:96.31:0,96,1644	1/1:2,24:26:15.85:1649,16,0	0/0:23,0:22:48.16:0,48,828	0/0:10,0:10:24.08:0,24,427	0/0:52,0:51:99:0,111,1939	0/1:4,16:21:99:1137,0,150	0/1:11,13:26:99:1047,0,307	1/1:8,34:42:69.71:1780,70,0	0/1:9,19:29:99:1286,0,141	0/0:25,0:25:63.20:0,63,1049	0/0:35,0:35:96.33:0,96,1708	0/0:8,0:8:24.08:0,24,427
chr10	92068041	.	GCTC	G	6831.86	PASS	AB=0.944;AC=19;AF=0.339;AN=56;BaseQRankSum=15.250;DP=587;FS=3.682;HRun=0;HaplotypeScore=117.5169;InbreedingCoeff=0.9461;MQ=85.74;MQ0=0;MQRankSum=-7.317;QD=37.95;ReadPosRankSum=2.159;VQSLOD=5.9381;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,2416	0/0:11,0:11:33.11:0,33,748	0/0:23,0:23:66.10:0,66,1340	0/0:38,0:37:93.20:0,93,1926	0/0:10,0:10:30.10:0,30,560	0/0:12,0:12:33.11:0,33,715	0/0:32,0:32:93.32:0,93,2049	0/0:35,0:35:99:0,102,2175	0/0:19,0:19:54.19:0,54,1224	1/1:3,15:18:45.15:737,45,0	1/1:2,6:8:15.05:250,15,0	0/0:26,0:26:78.27:0,78,1765	1/1:0,18:18:51.15:848,51,0	1/1:0,19:19:51.17:849,51,0	0/0:19,0:19:57.20:0,57,1260	0/0:20,0:19:60.21:0,60,1332	0/0:33,0:33:99:0,99,2243	1/1:1,28:29:78.27:1299,78,0	0/0:20,0:20:48.62:0,49,950	0/0:10,0:10:27.09:0,27,608	0/0:33,0:33:96.32:0,96,2110	1/1:0,19:19:45.15:749,45,0	1/1:1,6:7:15.05:250,15,0	1/1:1,30:31:84.29:1399,84,0	1/1:3,11:14:27.09:449,27,0	0/1:16,1:17:1.78:2,0,968	0/0:20,0:20:60.19:0,60,1313	0/0:10,0:10:30.09:0,30,636
chr10	92068906	.	G	GA	4434.29	PASS	AB=0.827;AC=49;AF=0.875;AN=56;BaseQRankSum=0.636;DP=686;FS=16.380;HRun=15;HaplotypeScore=118.9624;InbreedingCoeff=0.2852;MQ=88.80;MQ0=5;MQRankSum=-4.488;QD=6.90;ReadPosRankSum=-0.566;VQSLOD=2.0171;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,3:43:15.66:0,16,411	1/1:12,0:15:22.76:115,23,0	0/1:55,0:34:3.25:3,0,103	0/1:55,0:41:6.64:7,0,69	0/1:18,2:21:7.59:113,0,8	1/1:5,1:23:31.37:162,31,0	1/1:9,0:19:28.61:150,29,0	1/1:16,2:29:35.26:259,35,0	1/1:4,17:21:11.95:209,12,0	1/1:13,1:29:41.54:239,42,0	1/1:9,0:16:27.31:145,27,0	1/1:6,12:18:26.97:227,27,0	1/1:5,2:13:6.15:30,6,0	1/1:7,1:18:2.92:69,3,0	1/1:11,1:29:45.59:232,46,0	1/1:7,1:19:25.72:140,26,0	1/1:10,0:26:34.68:177,35,0	1/1:8,0:28:34.17:173,34,0	1/1:13,7:23:13.86:219,14,0	0/1:10,9:19:8.69:132,0,9	1/1:4,10:16:32.65:255,33,0	1/1:5,3:17:16.62:116,17,0	1/1:3,2:15:31.83:192,32,0	1/1:8,0:19:34.03:171,34,0	1/1:4,1:17:24.42:142,24,0	1/1:5,14:21:44.67:346,45,0	1/1:12,19:39:20.44:351,20,0	0/1:5,10:15:6.03:64,0,6
chr10	92069569	.	GC	G	14216.50	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=5.185;DP=627;FS=1.538;HRun=7;HaplotypeScore=77.7365;InbreedingCoeff=0.9987;MQ=86.29;MQ0=0;MQRankSum=-4.986;QD=26.52;ReadPosRankSum=2.544;VQSLOD=5.6262;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,129,1621	1/1:2,12:14:33.07:336,33,0	0/0:18,0:17:44.81:0,45,539	0/0:23,0:24:38.18:0,38,456	1/1:3,19:22:57.13:581,57,0	1/1:0,22:22:63.14:643,63,0	1/1:4,24:28:66.14:673,66,0	1/1:5,22:27:60.11:606,60,0	1/1:3,31:34:84.19:857,84,0	1/1:1,21:22:63.14:642,63,0	1/1:0,13:13:36.08:367,36,0	1/1:3,24:27:72.16:735,72,0	1/1:0,17:17:51.12:520,51,0	1/1:4,22:26:66.15:673,66,0	1/1:0,23:23:69.16:704,69,0	1/1:0,23:23:66.15:673,66,0	1/1:2,24:26:66.15:674,66,0	1/1:2,11:13:30.07:306,30,0	1/1:5,15:20:45.08:451,45,0	1/1:0,9:9:24.05:245,24,0	1/1:2,39:41:99:1102,108,0	1/1:0,16:16:45.10:459,45,0	1/1:2,13:15:36.07:367,36,0	1/1:2,16:18:48.11:490,48,0	1/1:1,18:19:54.12:551,54,0	1/1:2,24:26:72.16:735,72,0	1/1:2,17:19:51.11:520,51,0	1/1:6,10:16:30.06:306,30,0
chr10	92070359	.	T	TA	1651.94	PASS	AB=0.908;AC=19;AF=0.339;AN=56;BaseQRankSum=-4.639;DP=580;FS=59.355;HRun=0;HaplotypeScore=106.3958;InbreedingCoeff=-0.2283;MQ=81.48;MQ0=0;MQRankSum=-1.838;QD=4.90;ReadPosRankSum=-6.320;VQSLOD=0.1810;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,100,1328	1/1:6,3:9:4.67:81,5,0	0/0:24,0:24:51.52:0,52,535	0/0:20,0:20:32.03:0,32,340	0/1:26,0:26:32.53:33,0,226	0/1:7,5:12:3.91:124,0,4	0/1:18,10:29:4.55:426,0,5	0/1:16,3:19:8.34:126,0,8	0/0:16,0:16:6.19:0,6,138	0/1:13,0:14:35.98:36,0,91	0/1:11,0:11:11.31:11,0,55	0/0:25,0:25:14.56:0,15,317	0/1:21,0:22:33.87:34,0,192	0/1:22,0:23:9.18:9,0,278	0/1:19,7:26:4.09:282,0,4	0/1:7,17:24:6.06:186,0,6	0/1:20,10:30:13.10:349,0,13	0/0:20,0:21:41.56:0,42,249	0/1:12,0:13:7.34:7,0,96	0/1:19,0:19:11.84:12,0,123	0/0:29,0:29:5.88:0,6,225	0/0:18,0:18:12.16:0,12,189	0/1:13,0:13:49.64:50,0,62	0/0:31,0:34:49.18:0,49,405	0/1:21,0:21:0.05:0,0,182	0/1:14,0:14:27.02:27,0,127	0/0:17,0:17:46.22:0,46,263	0/1:12,0:12:14.55:15,0,124
chr10	92070670	.	ATG	A	8319.26	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.986;DP=701;FS=0.000;HRun=0;HaplotypeScore=82.8979;InbreedingCoeff=0.9968;MQ=88.14;MQ0=0;MQRankSum=-3.638;QD=39.81;ReadPosRankSum=3.994;VQSLOD=6.9074;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,2665	0/0:8,0:8:21.07:0,21,393	0/0:31,0:31:93.31:0,93,1680	0/0:23,0:22:60.20:0,60,1062	0/0:21,0:21:60.21:0,60,1124	0/0:26,0:26:72.25:0,72,1338	0/0:33,0:33:90.31:0,90,1671	0/0:28,0:28:84.28:0,84,1540	0/0:19,0:19:54.19:0,54,1002	1/1:2,28:30:84.26:1207,84,0	1/1:0,13:13:33.11:485,33,0	0/0:35,0:35:99:0,102,1910	1/1:1,22:23:60.20:884,60,0	1/1:2,25:27:69.23:1016,69,0	0/0:34,0:34:99:0,102,1862	0/0:30,0:30:87.30:0,87,1624	0/0:20,0:20:60.21:0,60,1123	1/1:2,26:28:75.25:1105,75,0	0/0:23,0:23:66.23:0,66,1221	0/0:21,0:21:63.22:0,63,1165	0/0:35,0:35:99:0,105,1931	1/1:1,17:18:51.17:751,51,0	1/1:1,20:21:60.20:883,60,0	1/1:1,33:34:93.31:1370,93,0	1/1:0,15:15:42.14:619,42,0	0/0:29,0:28:87.29:0,87,1601	0/0:21,0:21:63.22:0,63,1180	0/0:5,0:5:15.05:0,15,281
chr10	92071066	.	C	CA	11146.44	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-15.318;DP=840;FS=1.927;HRun=1;HaplotypeScore=73.7015;InbreedingCoeff=0.9812;MQ=57.07;MQ0=16;MQRankSum=1.230;QD=39.39;ReadPosRankSum=0.852;VQSLOD=5.5026;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,147,1908	0/0:12,0:12:33.11:0,33,428	0/0:6,0:3:6.02:0,6,73	0/0:9,0:7:15.04:0,15,184	1/1:2,28:29:72.24:1079,72,0	0/0:17,0:17:48.12:0,48,593	0/0:36,0:31:93.30:0,93,1206	0/0:45,0:38:99:0,102,1276	1/1:1,28:28:81.27:1214,81,0	0/0:44,0:42:99:0,126,1621	0/0:19,0:19:54.18:0,54,699	1/1:2,38:41:99:1684,114,0	0/0:30,0:30:90.28:0,90,1152	0/0:39,0:39:99:0,108,1395	0/0:40,0:40:99:0,114,1452	0/0:37,0:37:99:0,102,1322	0/0:45,0:45:99:0,132,1713	0/0:30,0:30:81.19:0,81,1011	1/1:1,18:16:48.14:697,48,0	1/1:0,20:20:57.11:803,57,0	1/1:3,61:63:99:2518,169,0	0/0:29,0:29:78.25:0,78,1012	0/0:20,0:19:48.14:0,48,609	0/0:30,0:30:87.28:0,87,1128	0/0:18,0:18:48.16:0,48,623	1/1:2,24:25:36.28:1038,36,0	1/1:0,32:32:87.08:1303,87,0	1/1:0,21:21:54.18:809,54,0
chr10	92071382	.	T	TAA	15468.22	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.957;DP=618;FS=4.420;HRun=9;HaplotypeScore=116.8392;InbreedingCoeff=0.9690;MQ=57.60;MQ0=2;MQRankSum=-3.526;QD=26.81;ReadPosRankSum=0.116;VQSLOD=4.3812;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:63.11:0,63,659	1/1:4,11:15:27.01:363,27,0	0/0:7,0:7:20.06:0,20,188	0/0:7,0:5:9:0,9,95	1/1:8,0:42:95.80:861,96,0	1/1:5,24:30:74.66:1065,75,0	1/1:2,21:23:60.20:923,60,0	1/1:4,22:30:77.66:1065,78,0	1/1:6,0:20:38.99:355,39,0	1/1:7,21:29:64.47:885,64,0	1/1:2,23:25:69.06:956,69,0	1/1:4,0:17:32.95:290,33,0	1/1:2,16:18:42.14:646,42,0	1/1:3,14:17:33.07:481,33,0	1/1:3,15:21:47.55:628,48,0	1/1:4,10:14:33.08:483,33,0	1/1:7,13:21:42.14:644,42,0	1/1:9,20:27:51.13:758,51,0	1/1:6,0:13:24.04:243,24,0	1/1:3,2:28:64.65:547,65,0	1/1:1,2:16:36.03:353,36,0	1/1:1,8:10:21.02:275,21,0	1/1:4,17:22:15.63:570,16,0	1/1:4,20:24:45.11:666,45,0	1/1:2,21:22:54.14:805,54,0	1/1:9,2:25:55.22:486,55,0	1/1:10,1:34:67.93:648,68,0	1/1:1,0:29:51.01:471,51,0
chr10	92073242	.	C	CAA	6207.53	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-9.697;DP=623;FS=4.387;HRun=10;HaplotypeScore=108.1364;InbreedingCoeff=0.7059;MQ=61.93;MQ0=11;MQRankSum=3.528;QD=16.29;ReadPosRankSum=1.561;VQSLOD=3.5369;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:39:80.65:0,81,928	1/1:13,0:13:30.03:280,30,0	0/0:28,0:11:0.07:0,0,128	0/0:26,0:9:14.96:0,15,133	1/1:6,21:31:62.79:682,63,0	1/1:4,0:20:32.44:114,32,0	1/1:3,0:24:45.03:191,45,0	0/0:7,0:32:50.18:0,50,239	1/1:2,9:11:12.04:176,12,0	0/0:22,0:22:34.02:0,34,230	0/1:20,0:20:30.21:30,0,161	1/1:2,14:16:24.08:358,24,0	0/1:11,0:11:28.10:28,0,47	0/0:11,0:9:23.32:0,23,137	1/1:16,0:16:27.02:248,27,0	1/1:0,0:23:52.40:184,52,0	1/1:33,0:30:60.07:567,60,0	0/0:23,0:22:10.88:0,11,237	1/1:6,16:25:64.93:771,65,0	1/1:4,20:25:56.82:716,57,0	1/1:2,13:14:18.06:268,18,0	0/0:17,0:17:5.66:0,6,141	0/0:17,0:17:33.31:0,33,208	0/0:26,0:26:19.70:0,20,222	0/1:23,0:23:30.07:30,0,204	1/1:7,22:30:66.15:862,66,0	1/1:6,26:31:22.96:495,23,0	1/1:1,8:9:15.04:208,15,0
chr10	92073244	.	A	AAC	3180.56	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-6.242;DP=625;FS=1.656;HRun=0;HaplotypeScore=119.9246;InbreedingCoeff=0.3891;MQ=62.09;MQ0=10;MQRankSum=0.627;QD=12.28;ReadPosRankSum=4.529;VQSLOD=3.7034;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1533	1/1:1,14:15:30.08:517,30,0	0/0:26,0:11:5.83:0,6,207	0/0:28,0:12:19.87:0,20,250	0/1:32,0:32:99:175,0,124	0/0:19,0:19:39.65:0,40,178	0/0:25,0:25:28.48:0,28,186	0/0:32,0:32:90.84:0,91,697	0/1:12,0:12:30.40:64,0,30	0/0:21,0:21:59.97:0,60,727	0/0:19,0:19:43.20:0,43,580	1/1:16,0:16:23.60:151,24,0	0/0:12,0:12:26.27:0,26,257	0/0:12,0:10:27.07:0,27,357	1/1:0,16:16:27.09:467,27,0	0/0:23,0:23:54.32:0,54,205	1/1:2,29:28:60.12:1037,60,0	0/0:24,0:23:54.40:0,54,710	0/1:26,0:25:35.39:200,0,35	0/1:24,0:24:20.99:230,0,21	0/1:16,0:15:28.92:87,0,29	0/0:18,0:18:41.95:0,42,520	0/0:17,0:17:40.98:0,41,533	0/0:25,0:25:67.26:0,67,777	0/0:25,0:25:42.59:0,43,778	0/1:27,0:27:64.58:229,0,65	0/1:34,0:31:13.48:144,0,13	1/1:10,0:9:9.72:69,10,0
chr10	92074840	.	AT	A	2669.12	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-10.510;DP=560;FS=4.160;HRun=12;HaplotypeScore=86.6000;InbreedingCoeff=0.9591;MQ=68.01;MQ0=0;MQRankSum=-0.245;QD=14.67;ReadPosRankSum=3.023;VQSLOD=4.4662;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,1:42:81.80:0,82,971	0/0:1,0:15:37.18:0,37,196	0/0:7,1:7:4.53:0,5,15	0/0:11,0:8:6:0,6,51	1/1:7,15:22:38.78:302,39,0	0/0:0,0:26:53.97:0,54,273	0/0:4,0:22:40:0,40,214	0/0:10,0:35:65.15:0,65,346	1/1:3,16:19:41.83:325,42,0	0/0:6,0:20:45.95:0,46,257	0/0:2,0:14:34.48:0,34,196	1/1:2,14:16:32.87:255,33,0	0/0:3,0:13:14.37:0,14,88	0/0:3,0:13:25.73:0,26,145	0/0:2,0:19:31.25:0,31,157	0/0:6,0:25:34.09:0,34,173	0/0:7,0:29:60.24:0,60,342	0/0:2,0:13:30.76:0,31,156	1/1:8,17:26:53.38:405,53,0	1/1:4,15:19:41.82:325,42,0	1/1:3,9:12:26.89:209,27,0	0/0:3,0:17:36.92:0,37,185	0/0:5,0:14:23.03:0,23,134	0/0:1,0:14:40.09:0,40,224	0/0:7,0:28:54.41:0,54,301	1/1:5,21:28:53.35:477,53,0	1/1:5,21:26:44.26:409,44,0	1/1:3,7:12:24.99:174,25,0
chr10	92076137	.	C	CT	13473.62	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=10.834;DP=818;FS=5.199;HRun=1;HaplotypeScore=95.7178;InbreedingCoeff=0.9997;MQ=86.91;MQ0=0;MQRankSum=-2.530;QD=41.46;ReadPosRankSum=1.879;VQSLOD=5.1114;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,172,2220	0/0:16,0:16:48.16:0,48,621	0/0:31,0:31:78.10:0,78,960	0/0:26,0:26:69.22:0,69,890	0/0:16,0:16:48.16:0,48,623	1/1:1,23:24:66.22:985,66,0	1/1:1,30:31:90.30:1349,90,0	0/0:30,0:30:84.25:0,84,1073	0/0:31,0:31:93.29:0,93,1193	1/1:1,34:35:99:1546,105,0	1/1:2,13:15:39.09:559,39,0	0/0:38,0:38:99:0,114,1451	1/1:0,39:39:99:1574,105,0	1/1:1,25:26:72.24:1079,72,0	0/0:35,0:35:99:0,105,1349	1/1:1,25:26:69.23:1034,69,0	0/0:35,0:35:99:0,105,1362	1/1:1,24:25:66.22:989,66,0	0/0:15,0:15:39.11:0,39,485	0/0:25,0:25:72.22:0,72,920	0/0:76,0:76:99:0,223,2846	1/1:1,21:22:60.20:899,60,0	1/1:1,14:15:36.12:540,36,0	1/1:2,40:42:99:1799,120,0	1/1:1,24:25:75.25:1121,75,0	0/0:31,0:31:93.30:0,93,1208	0/0:20,0:20:57.19:0,57,740	0/0:10,0:10:24.08:0,24,311
chr10	92076985	.	AGT	A	6792.95	PASS	AB=0.975;AC=26;AF=0.464;AN=56;BaseQRankSum=9.485;DP=773;FS=6.426;HRun=0;HaplotypeScore=109.4701;InbreedingCoeff=0.8222;MQ=62.09;MQ0=3;MQRankSum=2.586;QD=18.87;ReadPosRankSum=3.590;VQSLOD=4.9762;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:75.16:0,75,1050	1/1:3,4:10:26.44:235,26,0	0/0:39,0:20:12.04:0,12,161	0/0:39,0:23:8.92:0,9,226	0/0:25,2:27:21.40:0,21,733	0/1:13,0:18:8.36:8,0,160	0/0:16,0:24:27.87:0,28,204	0/0:37,0:37:3.67:0,4,939	0/0:22,2:24:6.39:0,6,555	1/1:5,24:31:76.73:789,77,0	1/1:6,12:19:43.18:454,43,0	0/1:18,1:19:5.60:6,0,611	1/1:6,17:23:35.75:429,36,0	1/1:6,19:26:36.11:604,36,0	1/1:9,20:31:41.96:479,42,0	0/0:11,0:21:40.78:0,41,342	1/1:14,29:43:59.25:903,59,0	1/1:7,22:29:57.17:679,57,0	0/0:21,1:22:15.22:0,15,647	0/0:32,1:35:39.53:0,40,1057	0/0:52,0:52:99:0,107,1605	1/1:4,16:20:27.08:322,27,0	1/1:3,20:23:45.05:536,45,0	1/1:12,23:37:59.85:671,60,0	1/1:5,26:31:57.17:679,57,0	0/0:17,1:18:8.59:0,9,541	0/0:22,0:22:44.60:0,45,685	0/0:15,0:15:30.56:0,31,444
chr10	92077008	.	A	ATG	1145.05	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.907;DP=758;FS=5.871;HRun=0;HaplotypeScore=134.9960;InbreedingCoeff=0.9952;MQ=62.45;MQ0=4;MQRankSum=-1.685;QD=20.09;ReadPosRankSum=-0.969;VQSLOD=3.6555;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:75.03:0,75,950	0/0:12,0:12:33.02:0,33,385	0/0:44,0:21:42.44:0,42,406	0/0:41,0:26:34.39:0,34,360	0/0:21,0:21:42.13:0,42,532	1/1:6,10:16:18.06:288,18,0	1/1:12,8:20:30.10:466,30,0	0/0:41,0:41:87.26:0,87,1090	0/0:20,0:20:51.16:0,51,644	0/0:31,0:31:63.18:0,63,763	0/0:19,0:19:45.14:0,45,553	0/0:19,0:19:45.14:0,45,571	0/0:20,0:20:45.14:0,45,559	0/0:28,0:28:75.09:0,75,849	0/0:28,0:28:57.17:0,57,693	1/1:6,15:21:36.08:533,36,0	0/0:45,0:45:99:0,110,1320	0/0:30,0:30:75.23:0,75,926	0/0:21,0:21:39.10:0,39,473	0/0:34,0:34:76.12:0,76,940	0/0:47,0:47:99:0,120,1467	0/0:19,0:19:39.11:0,39,474	0/0:30,0:30:75.24:0,75,933	0/0:35,0:35:81.18:0,81,973	0/0:31,0:31:63.20:0,63,784	0/0:17,0:17:42.13:0,42,527	0/0:19,0:19:51.16:0,51,648	0/0:12,0:12:21.07:0,21,267
chr10	92077426	.	A	AGAAG	38955.19	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-12.132;DP=766;FS=0.000;HRun=0;HaplotypeScore=109.8674;InbreedingCoeff=0.9994;MQ=78.14;MQ0=1;MQRankSum=-8.686;QD=63.65;ReadPosRankSum=1.409;VQSLOD=6.6986;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.25:0,90,1632	0/0:10,0:10:24.08:0,24,448	0/0:28,0:28:75.23:0,75,1288	0/0:18,0:18:42.11:0,42,725	1/1:2,33:35:93.09:2093,93,0	1/1:1,23:24:66.23:1681,66,0	1/1:2,13:16:33.11:764,33,0	1/1:6,31:37:96.32:2337,96,0	1/1:0,26:26:69.24:1796,69,0	1/1:9,22:32:84.29:2138,84,0	1/1:3,25:29:75.17:1725,75,0	1/1:0,18:19:51.18:1359,51,0	1/1:1,29:30:81.28:2117,81,0	1/1:4,25:29:69.24:1788,69,0	0/0:35,0:35:99:0,99,1800	1/1:2,30:32:84.29:2110,84,0	0/0:30,0:30:87.28:0,87,1588	1/1:3,24:28:61.72:1678,62,0	1/1:4,13:17:42.11:1043,42,0	1/1:4,33:37:99:2588,102,0	1/1:5,15:20:42.07:886,42,0	1/1:2,21:23:63.21:1490,63,0	1/1:4,24:28:66.22:1517,66,0	1/1:1,23:23:63.22:1645,63,0	1/1:1,31:32:81.28:2065,81,0	1/1:2,39:42:99:2973,120,0	1/1:6,31:39:90.31:2364,90,0	1/1:0,12:12:30.10:799,30,0
chr10	92081257	.	TG	T	15464.52	PASS	AB=0.909;AC=53;AF=0.946;AN=56;BaseQRankSum=2.925;DP=750;FS=5.855;HRun=3;HaplotypeScore=272.7790;InbreedingCoeff=0.4867;MQ=82.68;MQ0=0;MQRankSum=-9.765;QD=21.39;ReadPosRankSum=5.096;VQSLOD=3.6010;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,28:43:98.54:751,99,0	1/1:1,7:8:22.53:140,23,0	0/1:27,3:30:29.85:30,0,265	0/0:24,3:27:3.44:0,3,307	1/1:6,16:22:57.43:456,57,0	1/1:4,12:16:46.90:413,47,0	1/1:9,24:33:90.46:738,90,0	1/1:11,19:30:88.09:704,88,0	1/1:5,23:28:80.99:677,81,0	1/1:7,27:34:99:1015,101,0	1/1:7,17:24:62.02:465,62,0	1/1:6,28:34:92.15:742,92,0	1/1:8,16:24:67.97:535,68,0	1/1:8,17:25:54.13:572,54,0	1/1:14,32:46:99:1084,128,0	1/1:10,30:40:99:833,107,0	1/1:8,21:29:75.05:599,75,0	1/1:1,14:15:41.42:369,41,0	1/1:7,15:22:45.06:391,45,0	1/1:7,12:19:55.66:512,56,0	1/1:10,30:40:96.50:911,96,0	1/1:2,20:22:55.33:397,55,0	1/1:2,15:17:38.80:314,39,0	1/1:3,20:23:49.35:405,49,0	1/1:6,14:20:54.81:459,55,0	1/1:6,30:36:99:932,105,0	1/1:6,18:24:66.77:569,67,0	1/1:7,12:19:55.78:451,56,0
chr10	92081262	.	C	CT	20325.75	PASS	AB=0.929;AC=54;AF=0.964;AN=56;BaseQRankSum=3.344;DP=786;FS=3.668;HRun=1;HaplotypeScore=287.4132;InbreedingCoeff=-0.0367;MQ=78.07;MQ0=0;MQRankSum=-10.189;QD=25.86;ReadPosRankSum=4.631;VQSLOD=4.1969;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,28:42:99:1000,104,0	1/1:2,7:9:20.82:162,21,0	0/1:26,1:27:33.39:33,0,308	0/1:22,3:25:65.06:65,0,347	1/1:6,16:22:59.87:623,60,0	1/1:4,12:16:44.93:485,45,0	1/1:10,23:33:95.32:904,95,0	1/1:14,20:34:98.97:1046,99,0	1/1:6,23:29:86.72:879,87,0	1/1:10,28:38:99:1397,111,0	1/1:5,20:25:65.21:645,65,0	1/1:6,28:34:95.12:965,95,0	1/1:10,16:26:68.39:614,68,0	1/1:8,16:24:54.61:574,55,0	1/1:19,34:53:99:1447,143,0	1/1:13,30:43:99:1198,125,0	1/1:8,20:28:74.31:687,74,0	1/1:4,13:17:41.95:430,42,0	1/1:5,16:21:49.05:543,49,0	1/1:8,13:21:56.79:633,57,0	1/1:14,28:42:89.77:951,90,0	1/1:4,21:25:56.42:512,56,0	1/1:3,15:18:50.77:518,51,0	1/1:4,23:27:56.97:587,57,0	1/1:6,15:21:59.81:650,60,0	1/1:9,30:39:99:1253,114,0	1/1:6,21:27:80.83:882,81,0	1/1:8,12:20:59.97:642,60,0
chr10	92081290	.	TG	T	12247.28	PASS	AB=1.000;AC=55;AF=0.982;AN=56;BaseQRankSum=4.952;DP=746;FS=3.910;HRun=1;HaplotypeScore=331.8629;InbreedingCoeff=-0.0100;MQ=70.29;MQ0=0;MQRankSum=-0.561;QD=16.42;ReadPosRankSum=6.829;VQSLOD=4.0731;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:45,0:45:81.31:667,81,0	1/1:10,1:11:29.60:219,30,0	1/1:14,0:14:23.83:119,24,0	0/1:17,0:17:0.20:152,0,0	1/1:22,0:22:62.05:423,62,0	1/1:14,0:14:14.27:195,14,0	1/1:28,0:28:76.67:510,77,0	1/1:35,0:35:56.07:501,56,0	1/1:31,0:31:64.42:524,64,0	1/1:44,0:44:96.47:648,96,0	1/1:26,0:26:70.96:493,71,0	1/1:41,0:41:93.21:703,93,0	1/1:12,14:26:38.41:288,38,0	1/1:23,0:23:61.72:388,62,0	1/1:37,0:37:99:730,104,0	1/1:36,0:36:99:693,103,0	1/1:28,0:28:74.27:497,74,0	1/1:12,0:12:35.32:225,35,0	1/1:14,0:14:40.32:217,40,0	1/1:21,0:21:55.70:336,56,0	1/1:34,0:34:69.12:562,69,0	1/1:26,0:26:73.79:491,74,0	1/1:24,0:24:67.88:460,68,0	1/1:29,0:29:73.72:488,74,0	1/1:21,0:21:52.87:332,53,0	1/1:41,0:41:67.18:593,67,0	1/1:33,0:33:47.25:557,47,0	1/1:13,0:13:34.30:234,34,0
chr10	92082837	.	AAG	A	1796.16	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=-1.655;DP=511;FS=66.234;HRun=0;HaplotypeScore=77.4972;InbreedingCoeff=0.8190;MQ=63.59;MQ0=6;MQRankSum=-3.409;QD=10.26;ReadPosRankSum=-3.663;VQSLOD=0.6506;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:21:2.26:2,0,276	0/0:7,0:7:9.84:0,10,121	0/0:34,0:12:16.56:0,17,145	0/0:36,0:12:21.93:0,22,241	0/0:26,0:26:6.56:0,7,441	0/0:21,0:21:22.64:0,23,389	0/0:9,0:9:26.89:0,27,290	0/0:34,0:34:59.65:0,60,803	0/0:16,0:16:28.05:0,28,237	1/1:28,0:27:65.76:522,66,0	1/1:19,1:20:49.69:348,50,0	0/0:14,0:14:18.23:0,18,300	1/1:8,0:7:17.69:115,18,0	1/1:9,1:10:17.15:89,17,0	0/0:16,0:16:12.24:0,12,214	0/0:15,0:15:16.56:0,17,248	0/0:23,0:23:41.43:0,41,372	1/1:21,0:20:34.68:266,35,0	0/0:18,0:18:19.12:0,19,334	0/0:27,0:27:23.57:0,24,606	0/0:5,0:5:5.97:0,6,55	1/1:14,1:14:20.54:160,21,0	1/1:9,0:9:18.64:120,19,0	1/1:13,0:13:17.94:149,18,0	1/1:8,2:10:24.69:196,25,0	0/1:19,0:19:37.25:37,0,193	0/0:25,0:25:58.66:0,59,651	0/0:10,0:10:20.59:0,21,210
chr10	92082838	.	AG	A	2484.30	PASS	AB=0.923;AC=25;AF=0.446;AN=56;BaseQRankSum=-0.647;DP=509;FS=127.659;HRun=1;HaplotypeScore=66.6947;InbreedingCoeff=0.4577;MQ=64.70;MQ0=5;MQRankSum=-5.505;QD=9.78;ReadPosRankSum=-3.548;VQSLOD=0.2560;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,9:21:23.84:24,0,190	0/1:7,0:7:14.46:14,0,74	0/0:33,0:13:8.81:0,9,162	0/0:34,1:13:18.69:0,19,237	0/1:28,0:28:12.45:12,0,391	0/0:20,0:20:20.78:0,21,319	0/0:9,0:9:21.93:0,22,202	0/0:34,0:34:48.92:0,49,672	0/0:17,0:17:14.49:0,14,200	1/1:27,2:28:75.02:598,75,0	1/1:21,0:21:59.02:472,59,0	0/1:14,0:14:15.43:15,0,214	1/1:6,2:7:17.86:135,18,0	1/1:9,1:10:26.30:201,26,0	0/1:16,0:16:37.25:37,0,146	0/1:10,5:15:2.93:3,0,191	0/0:23,0:23:3.16:0,3,295	1/1:18,2:19:43.82:349,44,0	0/0:18,0:18:8.38:0,8,244	0/0:27,0:27:9.95:0,10,446	0/0:5,0:5:5.41:0,5,42	1/1:13,1:14:32.17:212,32,0	1/1:8,1:9:20.74:149,21,0	1/1:12,1:13:28.43:216,28,0	1/1:10,0:10:26.84:206,27,0	0/1:18,0:18:41.40:41,0,189	0/0:24,0:24:26.62:0,27,463	0/0:10,0:10:20.54:0,21,180
chr10	92084075	.	GAGAAA	G	2954.48	PASS	AB=0.761;AC=18;AF=0.321;AN=56;BaseQRankSum=3.443;DP=524;FS=3.689;HRun=0;HaplotypeScore=86.8455;InbreedingCoeff=0.8580;MQ=51.62;MQ0=38;MQRankSum=2.779;QD=23.64;ReadPosRankSum=-1.546;VQSLOD=3.1319;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:78.22:0,78,1239	0/0:7,0:6:5.03:0,5,174	0/0:66,0:13:9.63:0,10,411	0/0:84,0:14:10.19:0,10,293	0/0:12,0:11:30.57:0,31,521	0/0:20,0:18:42.14:0,42,716	0/0:21,0:21:55.22:0,55,879	0/0:20,0:20:54.10:0,54,891	0/0:11,0:11:31.35:0,31,502	1/1:4,11:13:33.04:484,33,0	1/1:0,9:9:12.04:144,12,0	0/0:12,0:12:32.13:0,32,522	1/1:5,0:5:14.26:208,14,0	1/1:7,0:4:12.03:156,12,0	0/0:11,0:10:12.47:0,12,349	0/0:24,0:23:64.05:0,64,1047	0/0:15,0:13:30.07:0,30,440	1/1:11,0:11:30.07:451,30,0	0/0:11,0:10:29.31:0,29,494	0/0:14,0:12:36.07:0,36,578	0/0:23,0:20:43.39:0,43,752	0/1:1,11:12:0:0,0,0	1/1:5,0:4:9.03:151,9,0	1/1:21,0:20:45.06:682,45,0	1/1:19,0:18:54.18:872,54,0	0/1:21,0:21:2.23:2,0,916	0/0:9,0:9:24.08:0,24,405	0/0:8,0:9:24.08:0,24,409
chr10	92084706	.	CCTTGCGCTTG	C	2141.58	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=8.595;DP=328;FS=2.689;HRun=0;HaplotypeScore=115.8941;InbreedingCoeff=0.8324;MQ=40.32;MQ0=15;MQRankSum=-3.720;QD=57.88;ReadPosRankSum=4.253;VQSLOD=3.4426;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:44.93:0,45,1405	0/0:4,0:4:5.99:0,6,160	./.	./.	0/0:9,0:8:15.43:0,15,354	1/1:3,9:12:27.09:762,27,0	1/1:5,10:12:27.09:761,27,0	0/0:16,0:15:29.89:0,30,649	0/0:17,0:17:41.97:0,42,1676	0/0:9,0:8:20.96:0,21,645	0/0:9,0:9:20.98:0,21,620	0/0:18,0:18:47.20:0,47,1984	0/0:6,0:6:17.98:0,18,566	0/0:13,0:11:21.01:0,21,715	0/0:19,0:19:44.85:0,45,1284	1/1:1,9:9:27.09:758,27,0	0/0:35,0:32:73.44:0,73,2664	0/0:20,0:18:48.10:0,48,2060	0/0:16,0:16:42.08:0,42,1795	0/0:6,0:6:8.90:0,9,60	0/0:3,0:3:3.01:0,3,80	0/0:9,0:9:17.88:0,18,269	0/0:11,0:10:21.02:0,21,820	0/0:11,0:10:24.08:0,24,1261	0/0:8,0:8:12.03:0,12,502	0/0:11,0:11:24.04:0,24,919	0/0:19,0:16:38.93:0,39,1153	0/0:4,0:3:5.98:0,6,46
chr10	92084719	.	AGGCAAGC	A	1658.67	PASS	AC=6;AF=0.120;AN=50;BaseQRankSum=8.476;DP=256;FS=10.924;HRun=0;HaplotypeScore=77.1137;InbreedingCoeff=0.7192;MQ=41.91;MQ0=19;MQRankSum=-6.241;QD=51.83;ReadPosRankSum=2.140;VQSLOD=2.3002;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:36.12:0,36,1319	0/0:2,0:2:3.01:0,3,123	0/0:3,0:1:3:0,3,29	./.	0/0:8,0:7:8.38:0,8,263	1/1:0,9:9:27.09:590,27,0	1/1:3,10:10:30.10:620,30,0	0/0:7,0:6:15.05:0,15,574	0/0:14,0:14:36.12:0,36,1337	0/0:6,0:5:9.03:0,9,337	0/0:8,0:8:15.05:0,15,543	0/0:15,0:15:41.40:0,41,1543	0/0:9,0:9:24.08:0,24,934	0/0:9,0:7:15.05:0,15,614	0/0:11,0:11:24.08:0,24,926	1/1:1,9:9:27.09:585,27,0	0/0:28,0:25:59.64:0,60,2254	0/0:16,0:14:39.13:0,39,1520	0/0:14,0:14:35.95:0,36,1176	0/0:4,0:4:3.01:0,3,122	./.	0/0:4,0:4:3.01:0,3,123	0/0:9,0:8:14.69:0,15,470	0/0:12,0:11:33.10:0,33,1222	0/0:5,0:5:9.03:0,9,296	0/0:6,0:6:15.05:0,15,611	0/0:12,0:9:21.07:0,21,851	./.
chr10	92084771	.	GCCCAGGTTT	G	4380.36	PASS	AB=0.556;AC=15;AF=0.278;AN=54;BaseQRankSum=8.920;DP=359;FS=2.675;HRun=0;HaplotypeScore=114.3990;InbreedingCoeff=0.8336;MQ=76.52;MQ0=0;MQRankSum=-9.354;QD=65.38;ReadPosRankSum=1.464;VQSLOD=5.0001;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.22:0,63,2889	0/0:4,0:4:12.04:0,12,544	0/0:19,0:18:1.50:0,1,1200	0/0:16,0:14:39.13:0,39,1465	1/1:0,12:12:24.08:726,24,0	0/0:16,0:16:48.16:0,48,2262	0/0:24,0:24:72.25:0,72,3312	0/0:27,0:27:66.21:0,66,2740	1/1:3,4:7:12.04:363,12,0	0/0:6,0:6:18.02:0,18,582	0/0:9,0:9:27.09:0,27,1138	1/1:0,7:7:18.95:547,19,0	0/0:16,0:16:45.15:0,45,2160	0/0:7,0:7:21.07:0,21,994	0/0:14,0:14:39.13:0,39,1785	0/0:11,0:11:30.10:0,30,1447	0/0:35,0:35:87.30:0,87,4059	0/0:19,0:19:51.17:0,51,2408	1/1:3,7:10:24.08:726,24,0	1/1:2,8:10:24.08:706,24,0	./.	0/0:11,0:11:30.10:0,30,1448	0/0:6,0:6:18.06:0,18,869	0/0:18,0:18:51.17:0,51,2365	0/0:9,0:9:24.08:0,24,1151	0/1:2,8:10:99:612,0,121	1/1:0,9:9:18.06:524,18,0	1/1:0,2:2:6.02:175,6,0
chr10	92085119	.	TTAGTGGTTTAAGATAATGAGACCCAACCCCTTTGCCGAC	T	11590.52	PASS	AC=22;AF=0.407;AN=54;BaseQRankSum=10.318;DP=435;FS=13.141;HRun=0;HaplotypeScore=411.3272;InbreedingCoeff=0.8955;MQ=96.38;MQ0=0;MQRankSum=-9.406;QD=136.36;ReadPosRankSum=5.776;VQSLOD=3.3008;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,18167	0/0:13,0:13:36.12:0,36,6080	0/0:24,0:24:72.25:0,72,4398	0/0:21,0:21:63.22:0,63,4610	0/0:9,0:9:26.76:0,27,2809	1/1:0,11:11:12.04:1230,12,0	./.	0/0:26,0:26:75.23:0,75,5899	0/0:15,0:15:45.10:0,45,5236	1/1:0,7:7:18.06:1061,18,0	1/1:0,5:5:3.01:307,3,0	0/0:24,0:24:72.23:0,72,10395	1/1:0,5:5:15.05:1537,15,0	1/1:0,8:8:15.05:1537,15,0	0/0:24,0:24:72.25:0,72,10526	1/1:0,11:11:18.06:1845,18,0	0/0:30,0:30:90.30:0,90,13138	1/1:0,22:22:12.04:1230,12,0	0/0:14,0:14:39.13:0,39,3763	0/0:9,0:9:24.08:0,24,3132	0/0:50,0:50:99:0,147,22100	1/1:0,4:4:12.04:1230,12,0	1/1:0,1:1:3.01:307,3,0	1/1:2,1:3:3.01:78,3,0	1/1:0,8:8:12.04:1229,12,0	0/0:17,0:17:51.18:0,51,8109	0/0:18,0:18:54.19:0,54,8725	0/0:14,0:14:42.14:0,42,6703
chr10	92085158	.	C	CT	1586.13	PASS	AB=0.875;AC=23;AF=0.411;AN=56;BaseQRankSum=6.910;DP=560;FS=6.751;HRun=0;HaplotypeScore=133.3003;InbreedingCoeff=0.8642;MQ=89.21;MQ0=0;MQRankSum=-9.503;QD=9.91;ReadPosRankSum=-1.108;VQSLOD=3.6706;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1383	0/0:20,0:20:60.17:0,60,789	0/0:25,0:25:72.22:0,72,973	0/0:25,0:26:59.96:0,60,858	0/0:17,0:17:42.14:0,42,585	1/1:13,0:13:2.13:5,2,0	1/1:0,19:19:27.09:431,27,0	0/0:33,0:33:96.31:0,96,1325	0/0:17,0:17:51.17:0,51,713	1/1:7,2:9:16.77:243,17,0	0/1:6,1:7:0:0,0,0	0/0:19,0:19:57.19:0,57,796	1/1:6,6:12:13.03:168,13,0	1/1:9,3:12:5.50:55,6,0	0/0:27,0:27:81.26:0,81,1116	1/1:11,1:12:6.75:59,7,0	0/0:36,0:36:99:0,108,1505	1/1:22,1:23:4.37:52,4,0	0/0:20,0:20:60.19:0,60,822	0/0:12,0:12:33.11:0,33,461	0/0:61,0:61:99:0,178,2473	1/1:4,10:14:15.05:241,15,0	1/1:1,10:11:18.06:288,18,0	1/1:2,17:19:15.03:237,15,0	1/1:8,1:9:2.49:6,2,0	0/0:21,0:21:63.21:0,63,879	0/0:20,0:20:57.18:0,57,780	0/0:12,0:12:36.12:0,36,500
chr10	92087829	.	TCACACACCCATACACACACACACACACACACACA	T	2967.71	PASS	AB=0.855;AC=13;AF=0.260;AN=50;BaseQRankSum=1.521;DP=629;FS=4.987;HRun=0;HaplotypeScore=458.7404;InbreedingCoeff=0.5938;MQ=51.32;MQ0=11;MQRankSum=-4.932;QD=18.66;ReadPosRankSum=2.332;VQSLOD=0.5464;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:93.12:0,93,4888	0/0:11,0:10:24:0,24,1060	0/0:34,0:21:50.80:0,51,1245	0/0:30,0:12:24.08:0,24,719	0/0:7,0:7:9.02:0,9,160	0/0:26,0:25:55.11:0,55,1684	0/0:31,0:31:55.85:0,56,1953	0/1:18,0:17:55.50:55,0,485	0/0:31,0:31:44.60:0,45,1140	0/1:3,10:13:43.48:43,0,109	./.	0/0:36,0:36:34.31:0,34,929	1/1:20,0:19:30:923,30,0	1/1:25,0:25:15.05:485,15,0	0/0:34,0:34:52.49:0,52,1847	0/0:30,0:28:73.29:0,73,2894	0/0:28,0:28:32.71:0,33,742	1/1:23,0:23:42.10:1325,42,0	0/1:9,0:9:45.53:46,0,272	0/0:8,0:8:9.03:0,9,226	0/0:43,0:40:63.07:0,63,1250	./.	./.	1/1:38,0:38:14.56:234,15,0	1/1:13,0:13:2.99:23,3,0	0/0:27,0:27:26.70:0,27,915	0/0:21,0:21:4.32:0,4,691	0/0:5,0:5:15.04:0,15,304
chr10	92087834	.	CACCCAT	C	1361.88	PASS	AC=12;AF=0.240;AN=50;BaseQRankSum=1.207;DP=611;FS=19.539;HRun=0;HaplotypeScore=211.1844;InbreedingCoeff=0.8557;MQ=49.64;MQ0=13;MQRankSum=-3.402;QD=10.98;ReadPosRankSum=0.940;VQSLOD=1.3948;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:93.12:0,93,1937	0/0:10,0:9:23.99:0,24,322	0/0:32,0:19:51.02:0,51,789	0/0:29,0:11:5.32:0,5,310	0/0:6,0:6:9.03:0,9,152	0/0:24,0:23:55.23:0,55,742	0/0:34,0:34:55.45:0,55,771	0/0:18,0:16:43.27:0,43,582	0/0:30,0:30:80.92:0,81,1050	1/1:13,0:13:1.70:19,2,0	./.	0/0:34,0:34:72.87:0,73,932	1/1:13,7:19:30:417,30,0	1/1:16,7:23:15.05:245,15,0	0/0:32,0:32:51.68:0,52,706	0/0:32,0:30:75.37:0,75,1071	0/0:27,0:27:34.08:0,34,392	1/1:13,6:19:42.10:608,42,0	0/0:11,0:10:24.04:0,24,277	0/0:8,0:8:9.03:0,9,153	0/0:42,0:39:63.54:0,64,931	./.	./.	1/1:27,8:35:14.14:214,14,0	1/1:8,6:13:2.99:23,3,0	0/0:24,0:24:54.16:0,54,748	0/0:21,0:21:48.06:0,48,647	0/0:5,0:5:15.02:0,15,202
chr10	92087835	.	ACCCATACACACACACACACACACACACACACACACACACACG	A	2500.67	PASS	AB=1.000;AC=13;AF=0.260;AN=50;BaseQRankSum=4.458;DP=594;FS=2.918;HRun=0;HaplotypeScore=504.3272;InbreedingCoeff=0.6259;MQ=49.18;MQ0=14;MQRankSum=-4.463;QD=16.45;ReadPosRankSum=2.356;VQSLOD=0.4144;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:93.12:0,93,5488	0/0:10,0:9:24:0,24,1217	0/0:30,0:17:50.80:0,51,1404	0/0:28,0:10:24.55:0,25,852	0/0:5,0:5:9.03:0,9,229	0/0:23,0:22:55.11:0,55,1890	0/0:35,0:35:56.05:0,56,2241	0/1:19,0:16:99:149,0,385	0/0:30,0:30:61.94:0,62,1433	0/1:12,0:12:22.74:23,0,146	./.	0/0:34,0:34:55.55:0,56,1197	1/1:18,0:18:30:768,30,0	1/1:21,0:23:14.94:371,15,0	0/0:32,0:32:52.96:0,53,2095	0/0:32,0:30:74.53:0,75,3377	0/0:26,0:26:35.72:0,36,993	1/1:19,0:19:42.10:1139,42,0	0/1:11,0:10:8.71:9,0,325	0/0:7,0:7:9.03:0,9,294	0/0:39,0:36:63.07:0,63,1545	./.	./.	1/1:35,0:35:13.21:187,13,0	1/1:13,0:13:2.99:23,3,0	0/0:24,0:24:45.34:0,45,1221	0/0:18,0:18:37.44:0,37,955	0/0:5,0:5:15.05:0,15,392
chr10	92087836	.	CCCAT	C	1159.08	PASS	AC=12;AF=0.240;AN=50;BaseQRankSum=1.699;DP=588;FS=23.617;HRun=0;HaplotypeScore=194.1389;InbreedingCoeff=0.8563;MQ=49.15;MQ0=15;MQRankSum=-3.957;QD=9.66;ReadPosRankSum=0.423;VQSLOD=1.2533;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:93.11:0,93,1707	0/0:11,0:10:23.97:0,24,296	0/0:30,0:17:51.02:0,51,789	0/0:27,0:9:5.32:0,5,310	0/0:5,0:5:9.03:0,9,152	0/0:22,0:21:52.69:0,53,643	0/0:34,0:34:55.43:0,55,720	0/0:19,0:16:43.25:0,43,582	0/0:30,0:30:80.87:0,81,1023	1/1:12,0:11:1.79:35,2,0	./.	0/0:32,0:32:72.79:0,73,903	1/1:18,1:18:29.94:322,30,0	1/1:22,0:23:15.02:213,15,0	0/0:32,0:32:45.13:0,45,698	0/0:32,0:30:74.91:0,75,966	0/0:26,0:26:27.73:0,28,378	1/1:18,0:18:42.09:516,42,0	0/0:11,0:10:23.73:0,24,234	0/0:7,0:7:9.03:0,9,153	0/0:39,0:36:63.54:0,64,931	./.	./.	1/1:35,0:35:14.63:214,15,0	1/1:13,0:12:2.99:23,3,0	0/0:24,0:24:54.10:0,54,734	0/0:18,0:18:48.04:0,48,608	0/0:5,0:5:15.02:0,15,202
chr10	92087840	.	TAC	T	364.32	PASS	AB=0.865;AC=11;AF=0.344;AN=32;BaseQRankSum=0.601;DP=559;FS=0.000;HRun=0;HaplotypeScore=181.6144;InbreedingCoeff=0.3363;MQ=46.99;MQ0=16;MQRankSum=0.775;QD=2.04;ReadPosRankSum=0.270;VQSLOD=1.9095;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,3:35:35.39:35,0,480	0/0:9,0:10:2.96:0,3,19	./.	./.	./.	1/1:14,6:19:11.73:108,12,0	1/1:19,15:34:14.43:133,14,0	./.	0/0:30,0:30:2.90:0,3,16	0/0:13,0:12:2.92:0,3,7	./.	0/0:30,0:30:2.90:0,3,16	1/1:19,0:18:5.78:32,6,0	0/1:23,0:23:0:0,0,0	0/0:27,0:27:4.26:0,4,45	0/1:17,16:30:17.48:130,0,17	0/0:26,0:25:6.61:0,7,36	1/1:15,0:15:8.55:43,9,0	0/0:11,0:10:8.84:0,9,60	./.	./.	./.	./.	./.	./.	0/0:23,0:23:2.90:0,3,16	0/0:13,0:13:5.84:0,6,34	./.
chr10	92087845	.	ACACACACACACACACACACACACACACACACG	A	4828.82	PASS	AC=28;AF=0.583;AN=48;BaseQRankSum=2.747;DP=541;FS=3.766;HRun=0;HaplotypeScore=345.2249;InbreedingCoeff=0.8901;MQ=43.75;MQ0=17;MQRankSum=-2.212;QD=19.01;ReadPosRankSum=-1.127;VQSLOD=2.2382;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:67.16:0,67,3027	0/0:11,0:10:18.06:0,18,497	0/0:22,0:9:12.02:0,12,189	0/0:23,0:6:9.03:0,9,128	1/1:4,0:4:8.60:85,9,0	0/0:18,0:17:23.35:0,23,548	0/0:38,0:38:33.31:0,33,704	1/1:15,0:12:13.79:168,14,0	1/1:27,0:27:30.07:645,30,0	0/0:13,0:12:11.93:0,12,280	./.	1/1:26,0:26:27.09:642,27,0	1/1:18,0:17:11.78:316,12,0	1/1:21,0:22:8.94:128,9,0	0/0:27,0:27:28.96:0,29,816	0/0:33,0:30:42.11:0,42,1075	0/0:25,0:24:15.02:0,15,314	1/1:13,0:13:18.39:484,18,0	1/1:1,9:9:24.07:528,24,0	1/1:7,0:7:6.01:61,6,0	1/1:35,0:34:23.01:336,23,0	./.	./.	1/1:32,0:32:0.43:1,0,0	./.	1/1:3,21:24:45.11:819,45,0	1/1:13,0:13:27.02:510,27,0	1/1:5,0:5:9:106,9,0
chr10	92087855	.	AC	A	245.41	PASS	AB=0.817;AC=3;AF=0.058;AN=52;BaseQRankSum=-0.685;DP=477;FS=9.958;HRun=1;HaplotypeScore=166.5417;InbreedingCoeff=0.1947;MQ=40.68;MQ0=21;MQRankSum=-3.331;QD=4.16;ReadPosRankSum=3.027;VQSLOD=-0.2350;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:61.76:0,62,841	0/0:11,0:10:18.05:0,18,231	0/0:9,0:2:6.02:0,6,76	0/0:15,0:1:3.01:0,3,38	0/0:2,0:2:2.97:0,3,20	0/0:15,0:14:18.11:0,18,138	0/0:36,0:36:30.91:0,31,232	0/0:14,0:11:4.24:0,4,140	0/0:22,0:22:24.07:0,24,293	0/1:13,0:12:23.96:34,0,24	0/0:1,1:2:0:0,0,0	0/0:23,0:23:27.04:0,27,311	0/0:16,0:14:14.97:0,15,154	0/0:19,1:19:9.03:0,9,106	0/0:25,0:25:24.55:0,25,314	0/0:31,0:28:43.50:0,44,414	0/0:24,0:23:13.59:0,14,153	0/1:10,9:19:99:297,0,130	0/0:10,0:9:13.25:0,13,141	0/0:6,0:6:6:0,6,62	0/0:33,0:28:15.67:0,16,188	./.	./.	0/1:19,8:27:0.02:1,0,0	0/0:10,1:10:0:0,0,0	0/0:22,0:21:34.08:0,34,370	0/0:10,0:9:24.06:0,24,274	0/0:5,0:5:8.99:0,9,82
chr10	92087883	.	ACG	A	293.31	PASS	AB=0.978;AC=20;AF=0.500;AN=40;BaseQRankSum=3.007;DP=359;FS=8.323;HRun=0;HaplotypeScore=173.3563;InbreedingCoeff=0.0140;MQ=36.39;MQ0=15;MQRankSum=-3.283;QD=1.14;ReadPosRankSum=-0.569;VQSLOD=1.8356;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:36:0,36,450	0/0:5,0:4:2.98:0,3,21	./.	./.	./.	1/1:8,4:11:2.88:15,3,0	0/1:22,3:25:4.18:4,0,6	1/1:14,0:13:3.96:27,4,0	0/1:15,0:15:28.03:37,0,28	0/1:15,0:15:36.42:54,0,36	./.	1/1:21,0:21:8.79:54,9,0	0/1:13,0:11:19.96:20,0,44	1/1:9,0:8:8.79:51,9,0	0/1:17,0:17:8.53:30,0,9	0/1:21,3:22:5.10:65,0,5	0/1:18,0:17:13.88:22,0,14	0/0:16,0:16:13.52:0,14,242	0/0:15,0:10:8.93:0,9,47	./.	0/1:30,0:25:0:0,0,0	1/1:16,0:15:2.92:17,3,0	./.	0/1:23,0:23:0.01:1,0,0	./.	0/0:23,0:22:3.52:0,4,12	0/1:5,0:4:24.88:25,0,30	./.
chr10	92087887	.	ACG	A	430.34	PASS	AB=0.936;AC=18;AF=0.450;AN=40;BaseQRankSum=2.660;DP=340;FS=8.979;HRun=0;HaplotypeScore=160.1650;InbreedingCoeff=-0.0125;MQ=35.65;MQ0=14;MQRankSum=-3.625;QD=1.95;ReadPosRankSum=0.936;VQSLOD=1.8996;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:32.87:0,33,386	0/0:5,0:4:3:0,3,29	./.	./.	./.	0/1:12,0:11:0:0,0,0	0/0:25,0:25:2.55:0,3,20	0/0:12,0:12:10.13:0,10,77	0/1:16,0:16:25.21:32,0,25	0/1:10,5:15:51.52:149,0,52	./.	1/1:23,0:23:8.82:55,9,0	0/1:8,3:9:4.66:74,0,5	1/1:5,3:7:9.03:105,9,0	0/1:15,0:15:13.23:13,0,14	0/1:25,0:23:19.45:19,0,27	0/1:18,0:17:9.99:10,0,49	0/1:11,1:12:14.75:15,0,219	0/0:14,0:9:13.20:0,13,120	./.	1/1:28,0:24:2.99:24,3,0	1/1:10,4:13:3.01:35,3,0	./.	0/1:17,2:19:0.01:1,0,0	./.	0/0:21,0:20:8.50:0,8,56	0/1:5,0:4:25.88:26,0,33	./.
chr10	92087928	.	CGCAA	C	4014.16	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=1.294;DP=371;FS=37.875;HRun=0;HaplotypeScore=109.8033;InbreedingCoeff=0.6286;MQ=58.34;MQ0=11;MQRankSum=-1.183;QD=12.13;ReadPosRankSum=-0.677;VQSLOD=0.9180;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:60.02:0,60,601	1/1:5,0:5:8.78:55,9,0	0/1:17,0:11:2.60:3,0,156	0/0:18,0:11:19.33:0,19,261	1/1:6,0:6:14.96:119,15,0	1/1:9,4:13:11.92:87,12,0	1/1:20,1:21:29.61:211,30,0	1/1:7,0:6:13.24:107,13,0	1/1:0,19:19:8.40:125,8,0	1/1:16,0:16:44.12:309,44,0	1/1:4,0:4:5.97:45,6,0	1/1:0,27:27:8.35:117,8,0	1/1:11,0:10:29.18:191,29,0	1/1:18,0:18:42.55:292,43,0	1/1:14,0:14:17.87:135,18,0	1/1:8,3:11:20.52:143,21,0	1/1:19,0:19:31.98:204,32,0	1/1:10,0:10:26.33:171,26,0	1/1:6,1:6:17.90:145,18,0	1/1:1,0:1:2.99:24,3,0	1/1:23,0:21:44.37:338,44,0	1/1:14,0:14:20.56:135,21,0	1/1:4,0:4:11.85:81,12,0	1/1:20,0:20:29.46:220,29,0	1/1:13,0:13:35.85:278,36,0	1/1:16,0:16:41.91:349,42,0	1/1:0,12:12:8.33:115,8,0	1/1:2,0:2:2.88:15,3,0
chr10	92090631	.	TA	T	1853.45	PASS	AB=1.000;AC=24;AF=0.600;AN=40;BaseQRankSum=5.027;DP=200;FS=6.401;HRun=1;HaplotypeScore=45.7074;InbreedingCoeff=0.6694;MQ=69.19;MQ0=4;MQRankSum=-2.442;QD=15.71;ReadPosRankSum=1.390;VQSLOD=3.3991;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:35.91:0,36,520	./.	0/0:8,0:4:10.99:0,11,90	0/1:19,0:8:1.38:1,0,98	1/1:5,11:15:36.10:445,36,0	0/0:6,0:6:15.05:0,15,237	0/0:3,0:3:6.01:0,6,70	0/0:34,0:32:93.05:0,93,1417	1/1:1,6:7:15.03:162,15,0	1/1:2,0:2:0.72:10,1,0	./.	1/1:5,3:7:15.02:155,15,0	./.	./.	./.	0/0:3,0:3:9.03:0,9,141	0/0:3,0:3:3.01:0,3,48	0/1:11,0:11:2.14:2,0,180	1/1:2,15:16:39.95:348,40,0	1/1:3,3:5:9:85,9,0	1/1:0,2:2:3.01:39,3,0	1/1:2,0:2:2.96:19,3,0	./.	./.	./.	1/1:4,3:7:16.43:175,16,0	1/1:1,7:8:24.01:273,24,0	1/1:4,8:12:27.04:295,27,0
chr10	92090650	.	CT	C	1932.85	PASS	AB=0.714;AC=41;AF=0.788;AN=52;BaseQRankSum=2.732;DP=255;FS=7.640;HRun=11;HaplotypeScore=44.4039;InbreedingCoeff=0.4104;MQ=51.04;MQ0=18;MQRankSum=0.805;QD=11.57;ReadPosRankSum=-0.916;VQSLOD=2.0795;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:33.08:0,33,352	1/1:0,4:3:3:25,3,0	0/0:19,0:2:3.01:0,3,32	0/0:20,0:6:8.97:0,9,76	1/1:11,5:21:18:116,18,0	1/1:2,2:4:3:25,3,0	1/1:0,1:1:3:25,3,0	0/0:30,1:29:29.49:0,29,512	1/1:3,5:8:11.98:98,12,0	1/1:3,6:9:17.69:147,18,0	1/1:0,2:3:5.98:49,6,0	1/1:9,3:11:11.83:98,12,0	1/1:0,3:3:8.99:74,9,0	1/1:0,1:1:3:25,3,0	1/1:1,6:6:11.99:98,12,0	1/1:1,4:5:8.98:74,9,0	0/1:0,3:4:2.37:62,0,2	0/1:6,4:10:43.57:55,0,44	0/1:10,2:10:37.27:37,0,42	1/1:1,7:7:17.98:148,18,0	./.	1/1:4,4:8:11.84:98,12,0	1/1:0,2:2:5.99:49,6,0	1/1:1,0:1:2.98:22,3,0	./.	1/1:4,8:12:23.96:197,24,0	1/1:6,6:11:14.94:122,15,0	1/1:4,15:19:53.94:443,54,0
chr10	92091085	.	G	GTT	3222.65	PASS	AB=0.884;AC=21;AF=0.375;AN=56;BaseQRankSum=-5.310;DP=432;FS=2.344;HRun=8;HaplotypeScore=68.4247;InbreedingCoeff=0.6059;MQ=83.12;MQ0=2;MQRankSum=0.894;QD=14.45;ReadPosRankSum=-4.915;VQSLOD=0.2338;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:23.95:0,24,257	0/0:4,0:4:8.90:0,9,71	0/0:20,0:15:15.33:0,15,235	0/1:16,0:14:25.84:26,0,58	1/1:3,14:19:35.95:405,36,0	0/1:19,0:19:50.93:51,0,92	0/0:12,0:12:19.79:0,20,121	0/1:23,0:24:62.29:62,0,67	1/1:2,13:16:27.09:429,27,0	0/0:17,0:17:26.99:0,27,291	0/0:13,0:13:24.02:0,24,268	1/1:3,12:16:5.61:57,6,0	0/0:12,0:12:30.03:0,30,321	0/0:12,0:12:23.99:0,24,248	0/1:16,0:17:16.78:17,0,166	0/0:13,0:13:28.60:0,29,173	0/0:28,0:28:39.65:0,40,261	0/0:17,0:19:44.46:0,44,403	1/1:6,9:16:33.11:497,33,0	1/1:2,12:14:30.01:395,30,0	0/1:1,9:15:1.60:65,0,2	0/0:7,0:7:12.02:0,12,133	0/0:5,0:5:8.99:0,9,90	0/0:19,0:19:41.84:0,42,446	0/0:7,0:7:15.03:0,15,167	1/1:2,15:18:51.15:768,51,0	1/1:2,12:17:33.05:462,33,0	1/1:2,12:15:12.04:190,12,0
chr10	92093793	.	A	AG	18239.07	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-12.860;DP=623;FS=2.034;HRun=2;HaplotypeScore=56.9703;InbreedingCoeff=0.9963;MQ=81.24;MQ0=0;MQRankSum=-4.559;QD=38.72;ReadPosRankSum=1.784;VQSLOD=5.4737;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,168,2028	1/1:1,8:9:24.08:344,24,0	0/0:18,0:18:41.23:0,41,470	0/0:17,0:17:47.56:0,48,520	1/1:1,23:24:72.24:1030,72,0	0/0:17,0:17:48.15:0,48,595	0/0:21,0:21:60.19:0,60,743	1/1:0,20:20:60.20:864,60,0	1/1:0,20:20:51.17:734,51,0	1/1:2,23:25:69.20:972,69,0	1/1:1,22:23:63.21:907,63,0	1/1:2,18:20:51.17:729,51,0	1/1:0,19:19:51.17:734,51,0	1/1:0,27:27:75.25:1080,75,0	1/1:2,28:30:75.25:1080,75,0	0/0:19,0:19:51.16:0,51,632	1/1:0,27:27:72.24:1037,72,0	1/1:1,19:20:54.18:778,54,0	1/1:2,21:23:66.19:912,66,0	1/1:1,12:13:36.08:495,36,0	1/1:1,30:31:75.25:1080,75,0	1/1:0,17:17:45.15:648,45,0	1/1:1,15:16:45.15:647,45,0	1/1:0,29:29:81.27:1167,81,0	1/1:0,13:13:39.13:562,39,0	1/1:0,28:28:84.27:1192,84,0	1/1:4,26:29:72.24:1031,72,0	1/1:0,7:7:15.05:216,15,0
chr10	92094644	.	TG	T	940.80	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.240;DP=711;FS=3.557;HRun=1;HaplotypeScore=66.9121;InbreedingCoeff=0.9754;MQ=76.31;MQ0=0;MQRankSum=-0.752;QD=34.84;ReadPosRankSum=-3.609;VQSLOD=2.3779;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,1848	0/0:5,0:5:14.98:0,15,188	0/0:11,0:11:33.09:0,33,440	0/0:22,0:22:60.17:0,60,817	0/0:28,0:28:75.05:0,75,977	0/0:21,0:21:63.19:0,63,880	0/0:31,0:31:93.30:0,93,1310	1/1:0,27:27:81.21:1036,81,0	0/0:27,0:27:81.22:0,81,1102	0/0:31,0:31:93.30:0,93,1297	0/0:18,0:18:51.06:0,51,677	0/0:26,0:26:78.20:0,78,1042	0/0:29,0:29:87.24:0,87,1187	0/0:31,0:31:93.28:0,93,1288	0/0:20,0:20:60.17:0,60,821	0/0:21,0:21:63.14:0,63,825	0/0:35,0:35:99:0,102,1338	0/0:20,0:20:57.06:0,57,728	0/0:18,0:18:54.13:0,54,715	0/0:21,0:21:60.01:0,60,764	0/0:44,0:44:99:0,132,1827	0/0:23,0:22:66.09:0,66,854	0/0:22,0:22:66.11:0,66,891	0/0:32,0:32:96.26:0,96,1311	0/0:24,0:24:72.19:0,72,970	0/0:45,0:45:99:0,135,1878	0/0:26,0:26:78.19:0,78,1036	0/0:7,0:7:17.57:0,18,179
chr10	92094952	.	CTCTTTTTTTTTTTTTTTTTTTTTTTGGT	C	15138.91	PASS	AB=0.757;AC=35;AF=0.625;AN=56;BaseQRankSum=7.916;DP=354;FS=26.440;HRun=0;HaplotypeScore=242.0617;InbreedingCoeff=0.5978;MQ=65.73;MQ0=9;MQRankSum=-5.739;QD=65.82;ReadPosRankSum=7.058;VQSLOD=2.3052;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:34.93:0,35,2559	0/0:7,0:6:0:0,0,0	0/0:25,0:12:11.53:0,12,269	0/0:19,0:9:20.99:0,21,497	1/1:9,2:11:5.34:404,5,0	0/0:6,0:7:21.03:0,21,1470	0/0:15,0:15:33.11:0,33,1810	0/1:14,0:13:0:0,0,0	1/1:4,6:10:17.75:1195,18,0	1/1:14,3:17:7.96:426,8,0	1/1:11,4:14:4.88:403,5,0	1/1:5,7:12:20.64:1416,21,0	1/1:5,3:8:8.65:607,9,0	1/1:3,5:8:11.70:809,12,0	0/0:13,0:12:0.47:0,0,1	0/0:8,0:8:15.05:0,15,1156	0/0:10,0:10:0:0,0,0	1/1:4,5:9:11.72:809,12,0	1/1:9,3:12:5.37:404,5,0	1/1:10,7:17:14.20:1011,14,0	1/1:2,3:4:5.98:404,6,0	1/1:7,4:11:11.35:809,11,0	1/1:10,7:17:17.57:1212,18,0	1/1:2,1:2:3.01:202,3,0	1/1:13,6:19:19.91:1397,20,0	1/1:4,8:12:14.50:846,15,0	0/1:9,17:25:8.24:2588,0,8	0/1:2,1:3:99:196,0,147
chr10	92095043	.	ACCACTGAGCTAAATCCCCAACC	A	15700.66	PASS	AC=40;AF=0.952;AN=42;BaseQRankSum=7.634;DP=315;FS=4.298;HRun=0;HaplotypeScore=212.2706;InbreedingCoeff=0.3754;MQ=31.67;MQ0=22;MQRankSum=-6.802;QD=60.62;ReadPosRankSum=2.249;VQSLOD=4.2458;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:72.25:0,72,6761	./.	./.	./.	1/1:6,9:14:18.06:1032,18,0	1/1:10,6:14:15.05:873,15,0	1/1:14,4:13:12.04:699,12,0	./.	1/1:9,6:14:18.06:1048,18,0	1/1:6,5:9:15.05:743,15,0	1/1:14,12:25:36.12:2094,36,0	1/1:9,7:16:21.07:1222,21,0	1/1:2,3:5:12.04:698,12,0	1/1:6,1:6:3.01:174,3,0	./.	1/1:3,4:4:9.03:524,9,0	./.	1/1:8,1:8:1.25:146,1,0	1/1:10,1:9:3.01:175,3,0	1/1:7,7:13:24.08:1386,24,0	./.	1/1:9,8:16:24.08:1396,24,0	1/1:10,4:14:12.51:698,13,0	1/1:7,2:8:3.01:175,3,0	1/1:8,7:15:24.08:1396,24,0	1/1:12,5:14:15.05:873,15,0	1/1:14,1:11:3.01:175,3,0	1/1:1,1:2:3.01:175,3,0
chr10	92095158	.	AT	A	302.83	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.130;DP=464;FS=5.731;HRun=7;HaplotypeScore=65.8064;InbreedingCoeff=0.9793;MQ=66.16;MQ0=0;MQRankSum=-0.620;QD=23.29;ReadPosRankSum=-2.934;VQSLOD=2.5455;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.18:0,69,844	0/0:10,0:10:30.09:0,30,372	0/0:18,0:16:24.78:0,25,314	0/0:8,0:7:18.04:0,18,210	0/0:21,0:21:57.18:0,57,716	0/0:14,0:14:30.10:0,30,377	0/0:14,0:14:42.13:0,42,524	1/1:0,13:13:39.09:398,39,0	0/0:8,0:7:21.07:0,21,260	0/0:20,0:20:57.18:0,57,714	0/0:16,0:16:42.13:0,42,528	0/0:16,0:16:45.13:0,45,552	0/0:11,0:11:27.09:0,27,339	0/0:13,0:12:36.07:0,36,434	0/0:25,0:25:69.18:0,69,847	0/0:17,0:16:48.15:0,48,604	0/0:7,0:7:21.07:0,21,264	0/0:20,0:20:60.19:0,60,754	0/0:23,0:22:66.21:0,66,828	0/0:24,0:24:66.21:0,66,830	0/0:18,0:18:54.17:0,54,674	0/0:9,0:9:27.09:0,27,340	0/0:17,0:17:51.16:0,51,642	0/0:17,0:17:51.16:0,51,641	0/0:16,0:16:45.10:0,45,547	0/0:26,0:25:69.22:0,69,866	0/0:18,0:18:51.13:0,51,624	0/0:19,0:19:45.12:0,45,566
chr10	92095261	.	T	TTG	4601.57	PASS	AB=0.589;AC=22;AF=0.393;AN=56;BaseQRankSum=-0.865;DP=438;FS=3.931;HRun=0;HaplotypeScore=74.1144;InbreedingCoeff=0.8477;MQ=71.72;MQ0=1;MQRankSum=0.969;QD=25.01;ReadPosRankSum=-1.440;VQSLOD=4.6228;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.10:0,66,913	0/0:3,0:3:9.03:0,9,142	0/0:14,0:13:38.66:0,39,356	0/0:24,0:18:9.51:0,10,125	1/1:1,10:13:20.89:227,21,0	1/1:1,0:12:12.02:122,12,0	1/1:3,1:15:23.21:209,23,0	0/1:10,0:22:7.43:7,0,161	1/1:0,11:11:21.07:416,21,0	0/0:14,0:15:42.11:0,42,577	0/0:14,0:15:39.05:0,39,504	0/0:16,0:16:42.04:0,42,600	0/0:18,0:18:44.72:0,45,589	0/0:9,0:9:27.07:0,27,398	0/0:28,0:28:77.92:0,78,968	1/1:1,0:8:9.01:88,9,0	0/0:20,0:20:54.07:0,54,743	0/0:9,0:9:24.02:0,24,327	1/1:1,9:12:33.05:427,33,0	1/1:1,20:25:65.82:927,66,0	1/1:0,12:13:24.04:432,24,0	0/0:13,0:13:30.99:0,31,471	0/0:13,0:13:36.02:0,36,448	0/0:15,0:15:45.14:0,45,685	0/0:15,0:16:39:0,39,510	0/1:2,15:17:5.28:603,0,5	1/1:2,16:18:24.08:481,24,0	1/1:0,14:15:33.11:662,33,0
chr10	92095775	.	G	GA	8218.89	PASS	AB=0.587;AC=40;AF=0.714;AN=56;BaseQRankSum=-10.100;DP=593;FS=2.228;HRun=11;HaplotypeScore=63.1213;InbreedingCoeff=0.7463;MQ=73.51;MQ0=0;MQRankSum=1.016;QD=18.02;ReadPosRankSum=3.108;VQSLOD=6.0415;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:16:39.92:0,40,290	0/0:12,0:13:34.90:0,35,261	0/0:14,0:15:19.68:0,20,130	0/0:13,0:13:17.57:0,18,119	0/1:11,23:34:21.01:518,0,21	1/1:4,21:26:45.72:624,46,0	1/1:9,20:29:0.01:373,0,0	0/0:29,0:31:63.81:0,64,474	1/1:5,14:20:18.64:346,19,0	1/1:5,16:21:47.93:471,48,0	1/1:6,27:33:28.67:632,29,0	1/1:4,13:17:9.83:281,10,0	1/1:3,17:20:39.08:396,39,0	1/1:4,18:22:24.53:414,25,0	0/0:26,1:28:45.02:0,45,503	1/1:4,9:13:24.05:244,24,0	0/0:20,0:20:52.20:0,52,385	1/1:1,10:12:4.12:205,4,0	1/1:4,17:20:54.10:542,54,0	1/1:4,17:22:26.95:467,27,0	1/1:2,7:9:15.03:152,15,0	1/1:10,10:20:25.75:261,26,0	1/1:5,12:18:20.88:197,21,0	1/1:3,23:26:42.89:616,43,0	1/1:6,19:27:10.31:439,10,0	0/1:6,18:26:10.54:434,0,11	1/1:8,20:30:17.17:422,17,0	1/1:0,10:10:18.04:183,18,0
chr10	92096029	.	A	AT	1527.05	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-9.376;DP=577;FS=1.985;HRun=5;HaplotypeScore=54.1567;InbreedingCoeff=0.8376;MQ=74.94;MQ0=0;MQRankSum=-0.062;QD=25.88;ReadPosRankSum=-0.065;VQSLOD=2.6583;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.13:0,69,727	1/1:0,14:14:39.13:513,39,0	0/0:11,0:11:21.03:0,21,211	0/1:9,0:9:17.60:18,0,92	0/0:31,0:31:87.20:0,87,926	0/0:14,0:14:42.11:0,42,451	0/0:22,0:22:57.14:0,57,612	0/0:24,0:24:63.16:0,63,677	0/0:19,0:19:57.14:0,57,613	0/0:28,0:28:81.20:0,81,870	0/0:14,0:14:39.09:0,39,411	0/0:22,0:22:63.14:0,63,666	0/0:19,0:19:51.13:0,51,548	0/0:28,0:28:78.20:0,78,838	1/1:2,21:23:60.20:790,60,0	0/0:21,0:21:60.15:0,60,645	1/1:2,11:13:27.09:355,27,0	0/0:14,0:14:39.57:0,40,418	0/0:20,0:20:54.13:0,54,579	0/0:34,0:34:90.22:0,90,967	0/0:20,0:20:54.13:0,54,580	0/0:22,0:22:63.16:0,63,677	0/0:17,0:17:51.13:0,51,548	0/0:23,0:23:60.11:0,60,632	0/0:22,0:22:66.17:0,66,709	0/0:27,0:27:78.19:0,78,832	0/0:29,0:29:78.19:0,78,837	0/0:14,0:14:39.10:0,39,419
chr10	92097681	.	TCC	T	6480.93	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=2.810;DP=536;FS=6.342;HRun=10;HaplotypeScore=89.4900;InbreedingCoeff=0.9472;MQ=82.02;MQ0=7;MQRankSum=-0.369;QD=18.36;ReadPosRankSum=5.503;VQSLOD=3.5087;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:54.13:0,54,805	0/0:3,0:3:6.02:0,6,81	0/0:54,0:25:12.43:0,12,343	0/0:42,0:21:24.23:0,24,304	1/1:5,3:24:50.64:440,51,0	1/1:7,18:25:28.47:441,28,0	1/1:7,15:22:39.09:433,39,0	0/0:19,0:18:25.76:0,26,320	1/1:2,1:13:25.90:174,26,0	1/1:3,8:11:24.05:266,24,0	1/1:3,14:18:44.97:464,45,0	1/1:5,21:26:39.09:435,39,0	1/1:3,18:21:41.30:430,41,0	1/1:5,10:15:27.04:290,27,0	0/0:18,0:19:32.13:0,32,409	1/1:5,7:12:18.03:201,18,0	0/0:17,0:17:42.58:0,43,551	1/1:1,11:12:21.04:224,21,0	1/1:8,9:21:16.96:325,17,0	1/1:4,1:21:37.06:315,37,0	1/1:1,1:11:17.78:130,18,0	1/1:2,11:13:30.07:328,30,0	1/1:7,10:17:33.02:342,33,0	1/1:4,8:12:18.03:201,18,0	1/1:3,9:12:24.03:247,24,0	1/1:3,2:20:49.05:439,49,0	1/1:4,0:25:48.98:315,49,0	1/1:0,0:2:5.93:40,6,0
chr10	92097689	.	CCCT	C	1361.19	PASS	AB=0.971;AC=25;AF=0.446;AN=56;BaseQRankSum=1.751;DP=550;FS=5.609;HRun=0;HaplotypeScore=124.4418;InbreedingCoeff=-0.4391;MQ=78.60;MQ0=7;MQRankSum=2.796;QD=3.67;ReadPosRankSum=6.243;VQSLOD=1.3707;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:62.74:0,63,1120	0/1:6,0:6:31.73:32,0,81	0/0:57,0:24:22.21:0,22,539	0/0:45,0:21:38.59:0,39,467	0/1:26,0:26:99:172,0,120	0/1:22,1:23:67.89:68,0,106	0/1:21,1:21:37.62:38,0,106	0/1:16,0:15:48.41:48,0,246	0/1:15,0:15:9.48:9,0,54	0/1:11,0:11:36.02:97,0,36	0/1:17,1:18:27.25:143,0,27	0/0:24,0:24:5.20:0,5,55	0/1:22,1:23:42.59:83,0,43	0/1:17,1:18:30.40:30,0,137	0/1:17,0:17:33.71:34,0,329	1/1:9,0:9:5.44:29,5,0	0/0:15,0:15:42.58:0,43,526	0/1:14,1:15:30.54:42,0,31	0/1:23,0:23:96.82:97,0,163	0/1:24,0:24:87.42:87,0,150	1/1:10,0:10:9.14:25,9,0	0/1:14,0:14:32.61:83,0,33	0/1:13,1:15:8.96:95,0,9	0/0:11,0:11:4.34:0,4,55	0/1:11,2:13:33.82:88,0,34	0/1:21,0:21:35.46:176,0,35	0/1:29,0:29:35.36:35,0,73	1/1:3,0:3:4.04:11,4,0
chr10	92097691	.	CT	C	190.86	PASS	AB=0.983;AC=7;AF=0.125;AN=56;BaseQRankSum=-1.714;DP=562;FS=5.420;HRun=10;HaplotypeScore=115.9153;InbreedingCoeff=0.4560;MQ=77.55;MQ0=7;MQRankSum=-0.028;QD=3.03;ReadPosRankSum=-2.647;VQSLOD=-0.0098;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:44.66:0,45,442	1/1:6,0:6:8.94:68,9,0	0/0:56,0:24:19.39:0,19,185	0/0:44,0:20:17.01:0,17,93	0/0:27,0:27:40.32:0,40,270	0/0:23,0:23:34.03:0,34,302	0/0:23,0:22:32.77:0,33,333	1/1:7,7:13:20.89:164,21,0	0/0:16,0:16:17.69:0,18,117	0/0:12,0:12:17.81:0,18,172	0/0:19,0:19:14.46:0,14,178	0/0:24,0:24:46.84:0,47,291	0/0:23,0:23:17.45:0,17,210	0/0:19,0:19:29.99:0,30,274	0/1:18,1:19:26.36:77,0,26	0/1:10,0:10:4.64:5,0,85	0/0:15,0:15:12.96:0,13,44	0/0:15,0:15:9.90:0,10,113	0/0:23,0:23:42.20:0,42,271	0/0:26,0:26:25.82:0,26,220	0/0:10,0:10:4.81:0,5,22	0/0:15,0:15:19.88:0,20,145	0/0:15,0:15:3.18:0,3,138	0/0:11,0:11:23.60:0,24,157	0/1:14,0:14:2.31:2,0,120	0/0:21,0:21:15.10:0,15,131	0/0:29,0:29:12.16:0,12,101	0/0:3,0:3:0.47:0,0,1
chr10	92097920	.	G	GA	16139.57	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-9.574;DP=638;FS=3.527;HRun=7;HaplotypeScore=56.6325;InbreedingCoeff=0.9932;MQ=79.24;MQ0=0;MQRankSum=-2.634;QD=29.67;ReadPosRankSum=3.910;VQSLOD=5.3402;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.10:0,84,801	1/1:0,13:13:33.10:399,33,0	0/0:17,0:17:15.79:0,16,221	0/0:12,0:12:18.03:0,18,173	1/1:1,15:16:45.01:494,45,0	1/1:4,29:33:81.25:979,81,0	1/1:2,16:18:42.09:491,42,0	0/0:35,0:35:84.10:0,84,802	1/1:2,22:24:63.16:746,63,0	1/1:1,15:16:45.11:529,45,0	1/1:1,17:18:48.15:580,48,0	1/1:3,19:22:54.17:652,54,0	1/1:1,24:25:72.22:863,72,0	1/1:2,24:26:63.91:740,64,0	1/1:5,28:33:81.25:976,81,0	1/1:2,11:13:30.09:362,30,0	1/1:5,29:34:72.22:870,72,0	1/1:4,11:15:33.10:396,33,0	1/1:4,9:13:27.08:326,27,0	1/1:2,21:23:54.13:637,54,0	1/1:4,26:30:46.25:841,46,0	1/1:4,20:24:57.09:669,57,0	1/1:2,26:28:72.22:870,72,0	1/1:1,16:17:45.14:544,45,0	1/1:1,12:13:30.09:363,30,0	1/1:3,37:40:99:1328,111,0	1/1:5,27:32:72.22:870,72,0	1/1:0,18:18:51.16:616,51,0
chr10	92098063	.	AG	A	13764.86	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=8.970;DP=738;FS=0.000;HRun=6;HaplotypeScore=81.1948;InbreedingCoeff=0.9994;MQ=82.07;MQ0=0;MQRankSum=-4.532;QD=25.63;ReadPosRankSum=5.739;VQSLOD=4.4673;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,1322	0/0:17,0:17:45.11:0,45,550	0/0:16,0:16:23.33:0,23,415	0/0:36,0:36:36:0,36,794	1/1:1,20:21:51.09:535,51,0	1/1:2,26:28:60.15:644,60,0	1/1:4,18:22:54.09:568,54,0	0/0:30,0:30:87.26:0,87,1107	1/1:1,28:29:75.19:805,75,0	1/1:3,31:34:90.18:953,90,0	1/1:2,16:18:42.04:436,42,0	1/1:5,38:43:90.22:967,90,0	1/1:2,29:31:72.18:773,72,0	1/1:2,28:30:84.21:902,84,0	0/0:34,0:34:99:0,99,1273	1/1:3,17:20:41.97:451,42,0	0/0:30,0:30:87.27:0,87,1131	1/1:1,17:18:39.10:419,39,0	1/1:1,20:21:60.15:643,60,0	1/1:1,24:25:66.08:682,66,0	1/1:2,30:32:75.19:805,75,0	1/1:2,23:25:54.13:580,54,0	1/1:1,20:21:54.14:580,54,0	1/1:1,28:29:72.18:773,72,0	1/1:0,15:15:30.08:322,30,0	1/1:2,24:26:71.80:732,72,0	1/1:3,25:28:72.18:773,72,0	1/1:2,19:21:39.10:419,39,0
chr10	92100224	.	T	TTA	2757.59	PASS	AB=0.881;AC=43;AF=0.768;AN=56;BaseQRankSum=2.483;DP=362;FS=9.329;HRun=0;HaplotypeScore=57.7141;InbreedingCoeff=0.6556;MQ=57.09;MQ0=30;MQRankSum=2.971;QD=9.48;ReadPosRankSum=5.662;VQSLOD=1.4703;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:25:43.56:0,44,340	0/0:2,0:2:2.97:0,3,20	0/1:38,0:9:0.09:0,0,66	0/1:22,0:8:1.33:1,0,20	1/1:11,0:10:14.54:93,15,0	1/1:20,0:18:21.25:303,21,0	1/1:7,0:6:13.38:77,13,0	0/0:13,0:12:29.13:0,29,242	1/1:7,0:6:5.72:29,6,0	1/1:13,0:13:35.42:337,35,0	1/1:12,0:11:20.88:221,21,0	1/1:11,0:10:11.90:116,12,0	0/1:4,4:9:11.01:31,0,11	1/1:3,0:3:8.97:71,9,0	0/0:8,0:8:14.95:0,15,120	1/1:9,0:9:23.35:195,23,0	0/0:17,0:15:14.64:0,15,111	1/1:21,0:17:20.34:234,20,0	1/1:26,0:23:63.10:372,63,0	1/1:6,0:5:8.66:47,9,0	1/1:5,0:5:2.84:14,3,0	1/1:3,0:3:8.97:69,9,0	1/1:3,4:6:11.46:97,11,0	1/1:4,0:3:5.96:43,6,0	1/1:14,0:14:23.17:227,23,0	1/1:9,0:9:23.05:125,23,0	1/1:16,0:16:22.83:128,23,0	1/1:17,0:13:20.09:103,20,0
chr10	92100225	.	T	TA	2768.54	PASS	AB=0.939;AC=41;AF=0.732;AN=56;BaseQRankSum=4.534;DP=356;FS=0.000;HRun=0;HaplotypeScore=48.2058;InbreedingCoeff=0.4708;MQ=56.97;MQ0=31;MQRankSum=2.975;QD=9.82;ReadPosRankSum=6.920;VQSLOD=3.1508;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:26:48.66:0,49,377	0/0:2,0:2:2.97:0,3,20	0/1:38,0:9:1.55:2,0,61	0/1:22,0:8:7.23:17,0,7	1/1:1,10:10:14.79:119,15,0	1/1:10,11:18:18.62:243,19,0	1/1:7,0:6:13.38:76,13,0	0/0:14,0:13:29.13:0,29,242	1/1:0,7:6:6.01:56,6,0	1/1:7,6:13:33.06:258,33,0	1/1:2,10:11:20.62:160,21,0	1/1:10,0:9:11.94:116,12,0	0/1:6,0:6:11.50:11,0,20	1/1:3,0:3:8.97:71,9,0	0/0:8,0:8:17.90:0,18,140	0/1:7,2:9:3.15:111,0,3	0/0:18,0:16:26.67:0,27,193	1/1:17,3:16:1.73:171,2,0	1/1:4,21:21:62.88:537,63,0	1/1:1,4:5:8.95:73,9,0	1/1:1,4:5:3:27,3,0	1/1:3,0:3:8.97:69,9,0	1/1:5,1:5:8.34:57,8,0	1/1:3,0:2:5.96:43,6,0	0/1:12,2:14:26.72:94,0,27	1/1:1,8:9:23.94:216,24,0	1/1:0,14:14:24:221,24,0	1/1:6,12:13:21.02:195,21,0
chr10	92100231	.	T	TA	237.90	PASS	AB=0.850;AC=16;AF=0.286;AN=56;BaseQRankSum=3.228;DP=365;FS=32.694;HRun=0;HaplotypeScore=53.8894;InbreedingCoeff=0.2678;MQ=54.35;MQ0=37;MQRankSum=1.455;QD=2.20;ReadPosRankSum=-0.183;VQSLOD=0.5074;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:26:37.19:0,37,362	0/0:2,0:2:2.97:0,3,20	0/0:39,0:9:2.96:0,3,75	0/1:22,0:8:14.31:16,0,14	0/0:9,0:8:0.39:0,0,10	0/0:21,0:18:32.39:0,32,159	0/0:8,0:6:7.55:0,8,65	0/0:27,0:25:68.55:0,69,533	0/0:6,0:5:0.81:0,1,12	0/1:8,6:13:16.19:96,0,16	1/1:5,5:9:14.01:101,14,0	0/1:5,0:5:0.10:0,0,9	0/0:5,0:5:5.02:0,5,28	1/1:1,0:1:2.04:6,2,0	0/0:7,0:6:11.97:0,12,99	0/0:8,0:8:20.40:0,20,127	0/0:19,0:17:29.89:0,30,241	1/1:17,3:16:18.31:93,18,0	0/0:28,0:23:7.77:0,8,54	0/0:8,0:6:0.63:0,1,8	0/0:3,0:3:2.60:0,3,10	1/1:2,0:2:3.59:10,4,0	0/1:4,1:5:0.96:23,0,1	1/1:2,0:1:1.82:5,2,0	0/1:6,2:13:15.43:24,0,15	0/1:13,0:12:11.36:11,0,20	0/0:14,0:14:9.08:0,9,45	0/0:20,0:13:16.67:0,17,55
chr10	92100232	.	T	TTA	683.56	PASS	AB=0.961;AC=27;AF=0.482;AN=56;BaseQRankSum=7.524;DP=365;FS=24.654;HRun=0;HaplotypeScore=56.8309;InbreedingCoeff=0.2773;MQ=54.29;MQ0=38;MQRankSum=1.887;QD=3.35;ReadPosRankSum=6.055;VQSLOD=-0.0188;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:26:29.08:0,29,365	0/0:2,0:2:2.97:0,3,20	0/0:39,0:9:21.75:0,22,121	0/0:22,0:8:1.58:0,2,10	1/1:8,0:7:4.57:31,5,0	0/1:15,6:19:31.06:185,0,31	0/1:8,0:6:7.36:7,0,18	0/0:27,0:25:74.60:0,75,578	1/1:6,0:5:6.36:32,6,0	0/1:14,0:13:22.94:23,0,31	0/1:10,0:9:8.11:27,0,8	0/0:5,0:5:2.29:0,2,6	0/0:5,0:5:1.52:0,2,23	0/1:1,0:1:0:0,0,0	0/0:7,0:6:11.97:0,12,100	0/1:7,1:8:12.16:57,0,12	0/0:19,0:17:29.89:0,30,241	0/1:20,0:16:17.45:17,0,45	1/1:28,0:23:39.10:188,39,0	1/1:7,0:5:6.36:33,6,0	1/1:3,0:3:1.55:4,2,0	0/1:2,0:2:0:1,0,0	1/1:6,0:5:1.07:8,1,0	0/0:2,0:1:0.47:0,0,1	0/1:13,0:13:0.34:0,0,54	1/1:14,0:13:23.55:116,24,0	1/1:14,0:14:19.19:80,19,0	1/1:20,0:13:12.68:33,13,0
chr10	92100549	.	CCT	C	2494.74	PASS	AB=0.982;AC=33;AF=0.611;AN=54;BaseQRankSum=1.919;DP=289;FS=4.242;HRun=0;HaplotypeScore=51.0726;InbreedingCoeff=0.4904;MQ=64.43;MQ0=2;MQRankSum=-2.499;QD=15.89;ReadPosRankSum=1.788;VQSLOD=2.8820;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:78.10:0,78,1137	0/0:1,0:1:2.84:0,3,14	0/0:24,0:15:27.16:0,27,512	0/0:27,0:18:43.25:0,43,523	1/1:1,4:5:11.95:128,12,0	0/1:11,0:10:6.86:135,0,7	0/0:10,0:10:1.01:0,1,63	0/0:23,0:22:56.94:0,57,605	1/1:7,4:11:27.09:384,27,0	1/1:5,0:5:8.77:61,9,0	1/1:2,0:2:3.01:44,3,0	1/1:10,0:10:11.44:95,11,0	0/1:4,0:4:10.90:25,0,11	1/1:3,0:3:5.91:57,6,0	0/0:7,0:7:14.20:0,14,71	0/1:10,0:10:6.82:7,0,66	0/0:11,0:11:25.18:0,25,122	1/1:17,0:17:32.94:381,33,0	0/1:11,0:8:5.39:148,0,5	1/1:1,1:2:3.01:45,3,0	1/1:12,1:13:11.93:128,12,0	./.	1/1:5,0:5:3.01:40,3,0	1/1:18,0:17:23.13:325,23,0	1/1:3,0:3:5.80:33,6,0	1/1:5,1:4:8.98:102,9,0	1/1:7,4:11:23.72:331,24,0	0/1:9,1:9:0.91:205,0,1
chr10	92100550	.	CT	C	2761.61	PASS	AB=1.000;AC=45;AF=0.833;AN=54;BaseQRankSum=2.798;DP=289;FS=7.778;HRun=1;HaplotypeScore=46.5668;InbreedingCoeff=0.6441;MQ=66.09;MQ0=2;MQRankSum=-3.911;QD=14.69;ReadPosRankSum=3.296;VQSLOD=2.9057;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:74.21:0,74,898	1/1:1,0:1:2.60:10,3,0	0/0:23,1:15:30.29:0,30,402	0/0:27,0:19:43.35:0,43,452	1/1:4,1:5:11.94:95,12,0	1/1:11,0:10:22.59:167,23,0	1/1:6,5:11:22.82:154,23,0	0/0:21,0:20:52.76:0,53,472	1/1:4,7:11:27.01:243,27,0	1/1:5,0:5:8.77:61,9,0	1/1:0,2:2:3.01:32,3,0	1/1:0,10:10:17.88:161,18,0	1/1:4,0:4:11.12:86,11,0	1/1:0,3:3:6.02:69,6,0	0/1:8,0:8:5.16:12,0,5	1/1:7,3:10:7.99:89,8,0	1/1:11,0:11:16.98:60,17,0	1/1:1,16:17:33.08:389,33,0	1/1:7,4:8:8.58:127,9,0	1/1:1,1:2:3:26,3,0	1/1:11,2:13:11.95:99,12,0	./.	1/1:0,5:5:3.01:36,3,0	1/1:9,9:17:44.02:460,44,0	1/1:2,1:3:5.97:59,6,0	1/1:5,1:4:8.94:68,9,0	1/1:4,7:11:23.99:212,24,0	1/1:6,4:9:20.67:210,21,0
chr10	92100551	.	TC	T	832.20	PASS	AB=1.000;AC=36;AF=0.667;AN=54;BaseQRankSum=3.723;DP=305;FS=35.398;HRun=9;HaplotypeScore=61.0350;InbreedingCoeff=0.3232;MQ=66.63;MQ0=2;MQRankSum=-3.932;QD=4.36;ReadPosRankSum=3.553;VQSLOD=-0.5059;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:59.36:0,59,590	1/1:0,1:1:3:27,3,0	0/0:24,1:15:6.76:0,7,200	0/0:28,0:20:21.82:0,22,272	1/1:5,0:5:4.30:13,4,0	0/0:11,0:10:5.85:0,6,36	0/0:12,0:12:3.62:0,4,79	0/1:19,0:20:25.09:25,0,30	1/1:11,0:11:17.86:51,18,0	0/0:5,0:5:0:0,0,0	1/1:2,0:2:2.50:9,2,0	1/1:10,0:10:11.24:57,11,0	0/1:4,0:4:8.30:8,0,15	1/1:4,0:4:5.76:31,6,0	1/1:2,7:9:12:110,12,0	0/1:10,0:10:4.10:4,0,84	1/1:0,11:11:27.01:246,27,0	1/1:17,0:17:28.34:142,28,0	0/1:11,0:8:3.13:3,0,24	1/1:4,0:4:2.35:8,2,0	0/1:15,0:15:8.02:8,0,18	./.	1/1:6,0:6:2.92:17,3,0	1/1:19,0:18:8.17:105,8,0	1/1:3,0:3:2.80:13,3,0	1/1:7,0:5:7.34:31,7,0	1/1:11,0:11:16.46:51,16,0	0/1:10,0:9:6.72:32,0,7
chr10	92100559	.	CCT	C	1686.97	PASS	AB=0.913;AC=34;AF=0.630;AN=54;BaseQRankSum=1.945;DP=304;FS=23.366;HRun=0;HaplotypeScore=55.4466;InbreedingCoeff=0.2185;MQ=67.79;MQ0=1;MQRankSum=-2.714;QD=8.88;ReadPosRankSum=-0.550;VQSLOD=1.3760;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:75.36:0,75,1187	0/1:2,0:2:0.72:16,0,1	0/0:24,0:13:5.40:0,5,342	0/0:22,0:17:12.64:0,13,346	1/1:5,1:6:1.96:31,2,0	0/1:5,0:4:8.50:8,0,27	0/1:15,0:15:63.52:64,0,101	0/1:19,0:18:6.90:7,0,201	1/1:6,7:13:23.54:175,24,0	1/1:3,0:3:2.98:24,3,0	1/1:1,0:1:3.01:30,3,0	1/1:14,0:14:20.30:146,20,0	0/1:6,0:6:41.30:46,0,41	1/1:5,0:5:11.66:87,12,0	0/0:10,0:10:14.12:0,14,75	0/0:11,0:11:6.79:0,7,148	0/0:15,0:15:30.26:0,30,140	1/1:18,0:18:38.84:408,39,0	0/1:3,3:5:31.61:65,0,32	1/1:3,1:4:5.23:25,5,0	0/1:11,1:12:13.93:27,0,14	./.	1/1:3,1:4:2.87:17,3,0	1/1:22,0:21:1.10:285,1,0	1/1:2,0:2:2.79:13,3,0	1/1:8,1:8:17.28:115,17,0	1/1:7,7:14:25.55:191,26,0	0/1:6,4:9:32.76:76,0,33
chr10	92100560	.	CT	C	1440.34	PASS	AB=0.987;AC=36;AF=0.667;AN=54;BaseQRankSum=0.954;DP=341;FS=30.485;HRun=10;HaplotypeScore=71.4152;InbreedingCoeff=0.2826;MQ=65.85;MQ0=1;MQRankSum=-1.968;QD=6.00;ReadPosRankSum=1.731;VQSLOD=0.0163;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:57.02:0,57,609	1/1:2,0:2:2.98:22,3,0	0/0:24,0:13:17.86:0,18,184	0/0:23,0:17:15.77:0,16,202	1/1:10,0:10:5.91:43,6,0	1/1:7,0:6:2.90:17,3,0	1/1:17,0:17:13.80:194,14,0	0/0:17,0:16:32.87:0,33,291	1/1:13,0:13:12.61:144,13,0	1/1:3,0:3:2.99:24,3,0	1/1:5,0:5:2.90:18,3,0	1/1:19,2:21:11.76:83,12,0	1/1:8,0:8:5.90:45,6,0	1/1:6,1:7:11.64:70,12,0	0/1:10,0:10:8.74:9,0,27	0/1:11,1:12:17.19:17,0,27	0/1:15,0:15:22.79:23,0,60	1/1:11,8:19:38.60:271,39,0	0/1:8,0:7:7.62:58,0,8	1/1:4,0:4:2.86:17,3,0	0/1:19,0:19:17.23:33,0,17	./.	0/0:3,0:3:0:0,0,0	1/1:16,7:23:24.87:174,25,0	0/0:3,1:4:0:0,0,0	1/1:10,0:9:17.64:125,18,0	1/1:15,0:15:23.76:170,24,0	0/1:11,0:10:13.26:50,0,13
chr10	92100819	.	AAATT	A	1472.75	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=6.564;DP=216;FS=6.208;HRun=0;HaplotypeScore=34.9490;InbreedingCoeff=0.7572;MQ=81.80;MQ0=2;MQRankSum=-1.346;QD=34.25;ReadPosRankSum=1.083;VQSLOD=2.5003;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:24.08:0,24,572	0/0:2,0:2:6.02:0,6,162	0/0:12,0:8:8.93:0,9,217	0/0:40,0:15:21.47:0,21,218	1/1:1,3:4:6.02:113,6,0	0/0:7,0:7:21.06:0,21,449	0/0:4,0:4:12.04:0,12,298	0/0:42,0:41:99:0,117,3010	1/1:0,6:6:12.04:227,12,0	0/0:2,0:2:6.02:0,6,161	0/0:3,0:3:9.03:0,9,197	0/0:3,0:3:9.03:0,9,185	0/0:2,0:2:6.02:0,6,160	0/0:4,0:4:12.04:0,12,324	0/0:4,0:4:12.04:0,12,324	0/0:3,0:3:9.03:0,9,243	0/0:17,0:17:51.18:0,51,1337	0/0:14,0:14:39.13:0,39,993	1/1:2,10:12:26.31:420,26,0	1/1:1,0:1:3.01:49,3,0	1/1:0,4:4:9.03:171,9,0	./.	0/0:1,0:1:3.01:0,3,37	0/0:2,0:2:6.02:0,6,162	0/0:2,0:2:6.02:0,6,117	1/1:0,3:3:9.02:131,9,0	1/1:0,6:6:15.05:261,15,0	1/1:0,7:7:18.06:281,18,0
chr10	92101533	.	GA	G	9602.26	PASS	AB=0.857;AC=51;AF=0.911;AN=56;BaseQRankSum=1.062;DP=507;FS=1.735;HRun=10;HaplotypeScore=52.3460;InbreedingCoeff=0.7427;MQ=65.22;MQ0=0;MQRankSum=-1.444;QD=20.26;ReadPosRankSum=3.928;VQSLOD=5.6731;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:27:24.98:0,25,460	1/1:2,6:8:18:156,18,0	0/1:10,2:12:39.61:40,0,55	0/0:6,0:5:11.06:0,11,105	1/1:3,17:20:47.97:417,48,0	1/1:4,17:21:47.98:417,48,0	1/1:3,5:8:14.99:130,15,0	1/1:11,25:37:46.64:614,47,0	1/1:2,11:13:20.99:182,21,0	1/1:1,23:24:68.96:594,69,0	1/1:3,15:18:44.98:388,45,0	1/1:0,26:26:68.99:599,69,0	1/1:2,15:17:41.98:365,42,0	1/1:2,18:20:50.98:443,51,0	1/1:0,15:15:32.99:286,33,0	1/1:2,23:25:65.99:573,66,0	1/1:1,17:18:44.99:391,45,0	1/1:1,9:10:20.99:182,21,0	1/1:3,19:24:28.01:448,28,0	1/1:4,22:26:56.95:494,57,0	1/1:2,10:12:26.99:234,27,0	1/1:2,5:7:14.98:130,15,0	1/1:1,14:15:38.99:339,39,0	1/1:1,10:11:23.99:208,24,0	1/1:1,18:19:53.99:469,54,0	1/1:1,19:20:56.96:490,57,0	1/1:1,19:20:50.99:443,51,0	1/1:3,25:28:65.98:573,66,0
chr10	92101878	.	T	TA	5365.67	PASS	AB=0.713;AC=41;AF=0.732;AN=56;BaseQRankSum=-4.613;DP=599;FS=6.589;HRun=13;HaplotypeScore=76.5843;InbreedingCoeff=0.6018;MQ=66.68;MQ0=1;MQRankSum=0.114;QD=12.00;ReadPosRankSum=0.366;VQSLOD=4.6213;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:42:82.16:0,82,559	1/1:1,0:8:5.80:34,6,0	0/0:20,0:12:2.06:0,2,4	0/0:19,1:14:7.90:0,8,88	1/1:7,18:27:53.58:442,54,0	0/1:15,4:19:41.89:42,0,183	0/0:17,0:18:43.68:0,44,294	0/0:12,0:31:16.23:0,16,81	1/1:4,11:15:3.45:175,3,0	1/1:5,20:25:51.01:458,51,0	1/1:11,10:22:34.43:297,34,0	0/1:9,10:20:12.98:156,0,13	1/1:7,14:20:21.01:192,21,0	1/1:3,13:16:26.81:227,27,0	1/1:13,0:21:31.58:184,32,0	0/0:18,1:20:12.73:0,13,223	1/1:5,2:22:34.29:197,34,0	1/1:3,12:15:16.42:262,16,0	0/1:9,9:18:13.57:159,0,14	1/1:6,17:25:25.83:329,26,0	1/1:9,7:16:26.83:236,27,0	1/1:3,12:15:20.97:186,21,0	1/1:5,12:18:23.86:210,24,0	1/1:5,19:24:47.80:430,48,0	1/1:8,12:20:12.90:113,13,0	1/1:13,18:32:4.96:482,5,0	1/1:6,23:30:12.73:391,13,0	1/1:8,8:16:18.02:167,18,0
chr10	92102970	.	TAAC	T	3102.35	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.808;DP=654;FS=2.178;HRun=0;HaplotypeScore=91.8432;InbreedingCoeff=0.9988;MQ=72.07;MQ0=1;MQRankSum=-2.339;QD=43.09;ReadPosRankSum=1.212;VQSLOD=5.0344;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,3235	1/1:0,8:8:24.08:408,24,0	0/0:25,0:18:41.12:0,41,757	0/0:22,0:18:47.97:0,48,788	0/0:29,0:29:78.27:0,78,1662	0/0:27,0:27:78.27:0,78,1781	0/0:31,0:31:90.28:0,90,1958	1/1:0,23:23:66.19:1058,66,0	0/0:9,0:9:24.02:0,24,436	0/0:27,0:27:81.28:0,81,1774	0/0:20,0:20:54.19:0,54,1221	0/0:29,0:29:84.27:0,84,1844	0/0:21,0:21:60.17:0,60,1227	0/0:20,0:20:60.19:0,60,1305	1/1:0,20:20:57.15:928,57,0	0/0:24,0:24:69.20:0,69,1449	1/1:0,21:21:51.17:869,51,0	0/0:21,0:21:63.16:0,63,1376	0/0:26,0:26:75.26:0,75,1714	0/0:13,0:13:39.13:0,39,888	0/0:37,0:37:99:0,105,2285	0/0:20,0:20:54.15:0,54,1135	0/0:16,0:16:42.14:0,42,960	0/0:26,0:26:72.20:0,72,1537	0/0:18,0:18:51.17:0,51,1166	0/0:23,0:23:69.23:0,69,1522	0/0:26,0:26:78.27:0,78,1782	0/0:22,0:22:63.22:0,63,1442
chr10	92103220	.	CA	C	4448.84	PASS	AB=0.701;AC=42;AF=0.750;AN=56;BaseQRankSum=0.647;DP=525;FS=1.001;HRun=14;HaplotypeScore=73.9407;InbreedingCoeff=0.6234;MQ=73.20;MQ0=0;MQRankSum=-0.402;QD=11.04;ReadPosRankSum=2.938;VQSLOD=4.7722;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,2:34:51.05:0,51,577	1/1:2,10:13:28.80:191,29,0	0/1:14,0:11:5.84:6,0,45	0/0:20,1:18:6.11:0,6,105	1/1:2,13:15:32.65:226,33,0	0/0:8,1:25:22.46:0,22,198	0/0:7,1:23:17.13:0,17,197	1/1:9,14:26:24.35:227,24,0	0/1:2,7:9:6.46:85,0,6	1/1:2,16:19:40.67:273,41,0	0/1:6,12:18:54.78:185,0,55	1/1:8,13:21:26.35:175,26,0	1/1:3,12:18:15.09:199,15,0	1/1:7,13:21:19.75:129,20,0	1/1:4,13:17:26.73:185,27,0	0/0:7,0:19:20.21:0,20,142	1/1:4,19:24:53.46:357,53,0	1/1:4,19:26:28.78:318,29,0	1/1:6,5:12:11.79:81,12,0	1/1:5,10:15:14.75:170,15,0	1/1:7,7:14:20.67:144,21,0	0/1:4,5:9:9.99:85,0,10	1/1:4,7:14:23.85:141,24,0	1/1:7,17:27:54.69:337,55,0	1/1:3,19:24:23.80:292,24,0	1/1:5,13:18:23.46:232,23,0	1/1:5,15:20:41.63:288,42,0	1/1:2,7:9:17.84:123,18,0
chr10	92103688	.	TC	T	19434.22	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=13.598;DP=801;FS=3.946;HRun=3;HaplotypeScore=79.1620;InbreedingCoeff=0.9993;MQ=79.11;MQ0=0;MQRankSum=-4.544;QD=32.66;ReadPosRankSum=6.293;VQSLOD=4.8019;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,2071	0/0:17,0:17:51.17:0,51,734	0/0:17,0:17:42.14:0,42,591	0/0:29,0:28:81.13:0,81,1111	1/1:0,33:33:84.26:1041,84,0	1/1:1,20:21:57.18:707,57,0	1/1:2,33:35:87.27:1079,87,0	0/0:30,0:30:84.27:0,84,1177	1/1:0,20:20:51.16:632,51,0	1/1:0,35:35:99:1265,102,0	1/1:1,21:22:57.18:707,57,0	1/1:1,38:39:99:1265,102,0	1/1:1,32:33:90.28:1116,90,0	1/1:1,32:33:84.26:1041,84,0	0/0:31,0:30:93.31:0,93,1339	1/1:2,35:37:99:1265,102,0	0/0:34,0:34:99:0,99,1408	1/1:0,31:31:90.28:1116,90,0	1/1:2,19:21:51.14:618,51,0	1/1:0,26:26:60.18:744,60,0	1/1:2,50:52:99:1599,129,0	1/1:0,19:19:48.15:595,48,0	1/1:0,18:18:51.16:628,51,0	1/1:3,40:43:99:1302,105,0	1/1:1,24:25:69.22:855,69,0	1/1:0,21:21:63.20:781,63,0	1/1:0,24:24:66.21:818,66,0	1/1:0,7:7:21.07:260,21,0
chr10	92103866	.	C	CAG	30836.21	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-4.124;DP=724;FS=0.868;HRun=0;HaplotypeScore=92.1551;InbreedingCoeff=0.9928;MQ=72.86;MQ0=1;MQRankSum=-5.633;QD=48.79;ReadPosRankSum=3.297;VQSLOD=5.8572;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,1778	1/1:3,4:7:15.05:273,15,0	0/0:16,0:16:41.62:0,42,550	0/0:34,0:34:90.03:0,90,1238	1/1:0,21:21:60.21:1100,60,0	1/1:0,23:23:66.23:1210,66,0	1/1:1,28:29:78.27:1430,78,0	1/1:1,32:33:96.33:1755,96,0	1/1:1,21:22:60.21:1089,60,0	1/1:1,25:26:78.27:1416,78,0	1/1:1,11:12:24.08:440,24,0	1/1:1,44:46:99:2310,126,0	1/1:2,31:34:90.31:1631,90,0	1/1:1,25:27:69.24:1262,69,0	1/1:1,17:17:48.16:880,48,0	1/1:3,47:50:99:2530,138,0	1/1:1,29:30:87.30:1595,87,0	1/1:1,24:24:61.43:1152,61,0	1/1:4,15:20:54.15:919,54,0	1/1:1,11:12:33.11:605,33,0	1/1:0,39:40:99:2035,111,0	1/1:1,16:17:39.13:715,39,0	1/1:3,20:23:54.19:989,54,0	1/1:1,22:24:63.22:1155,63,0	1/1:2,23:25:66.23:1210,66,0	1/1:2,27:29:81.28:1485,81,0	1/1:0,30:31:66.23:1210,66,0	1/1:0,8:8:24.08:440,24,0
chr10	92108426	.	AAAAAG	A	2500.81	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.801;DP=728;FS=0.000;HRun=0;HaplotypeScore=129.4589;InbreedingCoeff=0.9503;MQ=58.93;MQ0=11;MQRankSum=-0.371;QD=29.42;ReadPosRankSum=4.277;VQSLOD=3.3114;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:84.23:0,84,2161	1/1:3,9:12:18.06:342,18,0	0/0:19,0:10:11.94:0,12,313	0/0:10,0:3:6.02:0,6,123	0/0:36,0:36:84.26:0,84,2135	0/0:21,0:21:54.18:0,54,1365	0/0:22,0:22:57.19:0,57,1414	0/0:39,0:37:90.30:0,90,2299	0/0:25,0:25:54.17:0,54,1246	0/0:21,0:20:48.15:0,48,1155	0/0:18,0:18:39.09:0,39,991	0/0:35,0:34:90.29:0,90,2392	0/0:21,0:21:51.18:0,51,1402	0/0:37,0:36:75.20:0,75,1751	1/1:5,29:33:54.19:1033,54,0	0/0:28,0:28:63.21:0,63,1772	1/1:9,29:39:66.23:1266,66,0	0/0:17,0:18:39.12:0,39,1015	0/0:27,0:23:60.21:0,60,1651	0/0:29,0:29:72.17:0,72,1666	0/0:25,0:24:66.23:0,66,1804	0/0:23,0:23:54.18:0,54,1541	0/0:21,0:21:57.18:0,57,1528	0/0:27,0:27:66.21:0,66,1743	0/0:29,0:29:72.24:0,72,1887	0/0:36,0:36:93.32:0,93,2386	0/0:28,0:28:69.20:0,69,1704	0/0:14,0:14:39.13:0,39,1094
chr10	92108745	.	G	GA	3913.80	PASS	AB=0.699;AC=15;AF=0.268;AN=56;BaseQRankSum=-11.766;DP=736;FS=5.301;HRun=10;HaplotypeScore=80.4812;InbreedingCoeff=0.7651;MQ=76.89;MQ0=0;MQRankSum=-0.916;QD=16.65;ReadPosRankSum=-0.757;VQSLOD=3.8117;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:38:88.18:0,88,715	0/0:7,0:8:14:0,14,104	0/0:21,0:22:32.20:0,32,247	0/0:20,0:19:29.04:0,29,187	0/1:5,15:22:20.17:377,0,20	0/0:23,0:25:45.10:0,45,501	0/0:25,1:27:41.95:0,42,538	0/0:18,1:20:18:0,18,343	1/1:4,19:23:17.54:392,18,0	0/0:24,0:24:53.93:0,54,444	0/0:17,0:17:47.93:0,48,392	0/0:40,0:40:92.06:0,92,742	0/0:34,0:36:99:0,100,800	0/1:27,2:30:2.07:2,0,384	0/0:29,1:30:36.90:0,37,506	0/0:32,2:35:24.93:0,25,604	0/0:23,2:26:32.98:0,33,467	0/0:34,0:34:71.83:0,72,587	0/1:10,20:31:7.93:514,0,8	1/1:6,17:24:25.61:500,26,0	1/1:6,20:26:57.14:608,57,0	0/0:27,0:27:71.90:0,72,588	0/0:26,0:27:39.87:0,40,513	0/0:24,1:25:34.41:0,34,487	0/0:18,0:18:38.91:0,39,320	1/1:11,24:36:34.40:681,34,0	1/1:9,25:34:38.51:615,39,0	1/1:1,8:9:21.05:224,21,0
chr10	92110690	.	GTTTGTT	G	7363.95	PASS	AB=0.853;AC=21;AF=0.375;AN=56;BaseQRankSum=15.309;DP=701;FS=7.414;HRun=0;HaplotypeScore=136.4514;InbreedingCoeff=0.7738;MQ=60.82;MQ0=6;MQRankSum=-8.071;QD=25.57;ReadPosRankSum=1.612;VQSLOD=4.3200;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,126,3408	0/0:11,0:11:24.08:0,24,712	0/1:25,0:14:3.70:4,0,243	0/1:23,0:12:13.19:13,0,165	0/0:39,0:39:99:0,102,2731	0/0:20,0:20:51.14:0,51,1348	0/0:17,0:17:42.13:0,42,1102	0/0:35,0:35:69.21:0,69,1364	0/0:23,0:23:57.18:0,57,1500	1/1:2,24:26:72.23:1252,72,0	1/1:4,13:17:33.02:517,33,0	1/1:3,20:23:35.80:770,36,0	1/1:2,14:16:30.10:642,30,0	1/1:8,18:26:42.14:898,42,0	0/0:27,0:27:75.23:0,75,2022	0/0:21,0:21:45.15:0,45,1360	0/0:21,0:21:45.14:0,45,1187	1/1:4,20:24:27.09:577,27,0	0/0:28,0:26:54.13:0,54,909	0/0:39,0:39:96.32:0,96,2792	0/0:16,0:16:48.15:0,48,1215	1/1:4,16:19:48.07:796,48,0	1/1:3,20:23:38.71:772,39,0	0/1:6,22:28:9.55:180,0,10	1/1:4,32:37:45.15:944,45,0	0/0:25,2:27:1.51:0,2,1538	0/0:28,0:28:78.24:0,78,2273	0/0:12,0:12:30.10:0,30,819
chr10	92113692	.	TGGTCCTGAGCTAGGGTAAGAC	T	8530.81	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=12.348;DP=731;FS=5.742;HRun=0;HaplotypeScore=356.0177;InbreedingCoeff=0.9421;MQ=81.17;MQ0=0;MQRankSum=-9.565;QD=39.49;ReadPosRankSum=0.476;VQSLOD=2.7076;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,120,9955	0/0:7,0:7:15.05:0,15,1263	0/0:31,0:31:32.27:0,32,1748	0/0:25,0:25:38.99:0,39,1780	0/0:21,0:21:51.18:0,51,4294	0/0:27,0:27:63.18:0,63,5040	0/0:34,0:34:69.19:0,69,5247	0/0:23,0:23:39.13:0,39,2253	0/0:24,0:24:60.18:0,60,5258	1/1:4,11:15:33.03:1003,33,0	1/1:2,7:9:6.02:336,6,0	1/1:12,14:26:21.07:1096,21,0	1/1:3,19:22:21.07:1167,21,0	1/1:7,22:29:21.07:1175,21,0	0/0:32,0:32:72.22:0,72,5872	0/0:28,0:28:75.26:0,75,6510	0/0:39,0:39:93.26:0,93,6840	1/1:9,14:23:12.04:558,12,0	0/0:26,0:26:45.14:0,45,3337	0/0:14,0:14:33.01:0,33,2116	0/0:62,0:62:99:0,153,12136	1/1:4,13:17:21.07:1162,21,0	1/1:6,13:19:12.04:672,12,0	1/1:14,23:37:2.75:168,3,0	1/1:5,14:19:24.01:1193,24,0	0/0:30,0:30:60.20:0,60,5214	0/0:31,0:31:69.24:0,69,5660	0/0:11,0:11:30.05:0,30,2131
chr10	92114065	.	C	CA	14747.63	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-6.888;DP=575;FS=0.485;HRun=1;HaplotypeScore=79.0791;InbreedingCoeff=0.9593;MQ=78.29;MQ0=0;MQRankSum=-7.064;QD=29.61;ReadPosRankSum=3.019;VQSLOD=4.6540;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:84.19:0,84,1010	1/1:2,3:5:9.03:134,9,0	0/0:17,0:17:45.42:0,45,439	0/0:25,0:25:55.45:0,55,546	1/1:10,0:10:26.93:228,27,0	1/1:7,20:27:72.62:970,73,0	1/1:5,25:30:56.62:846,57,0	1/1:4,20:24:60.01:634,60,0	1/1:19,2:21:51.07:501,51,0	1/1:2,15:17:48.08:610,48,0	1/1:7,8:15:32.98:413,33,0	1/1:2,24:26:51.12:758,51,0	1/1:3,15:18:51.16:726,51,0	1/1:2,19:21:39.13:581,39,0	1/1:2,19:21:61.06:843,61,0	1/1:1,17:18:45.10:671,45,0	1/1:4,34:38:80.31:1284,80,0	1/1:0,19:19:45.14:651,45,0	1/1:15,0:15:41.99:389,42,0	1/1:13,0:13:32.87:282,33,0	1/1:26,3:29:53.86:553,54,0	1/1:9,17:26:66.64:889,67,0	1/1:2,12:14:21.06:288,21,0	1/1:1,24:24:60.11:850,60,0	1/1:3,19:23:42.14:624,42,0	1/1:15,2:17:50.99:492,51,0	1/1:20,0:20:42.04:397,42,0	1/1:6,0:6:9.42:133,9,0
chr10	92114066	.	A	AAG	10924.63	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-1.632;DP=584;FS=0.439;HRun=0;HaplotypeScore=107.9803;InbreedingCoeff=0.9173;MQ=78.35;MQ0=0;MQRankSum=-6.376;QD=21.59;ReadPosRankSum=3.086;VQSLOD=5.3781;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:36:84.21:0,84,1233	1/1:5,0:5:8.53:59,9,0	0/0:16,0:17:46.42:0,46,507	0/0:22,0:25:55.37:0,55,643	1/1:1,11:14:26.97:418,27,0	1/1:27,0:27:67.97:484,68,0	1/1:30,0:30:21.21:335,21,0	1/1:22,0:22:50.58:380,51,0	1/1:3,19:24:51.13:987,51,0	1/1:15,0:16:47.09:313,47,0	1/1:14,1:15:28.83:235,29,0	1/1:27,0:27:30.72:331,31,0	1/1:16,1:17:50.52:388,51,0	1/1:21,0:21:3.40:220,3,0	1/1:21,0:21:56.43:400,56,0	1/1:18,0:18:40.60:296,41,0	1/1:37,0:37:52.07:538,52,0	1/1:19,0:19:44.54:306,45,0	1/1:2,14:16:42.04:645,42,0	1/1:0,13:13:35.90:493,36,0	1/1:4,24:29:54.05:927,54,0	1/1:23,1:24:43.04:475,43,0	1/1:13,1:14:20.47:173,20,0	1/1:25,0:24:59.33:406,59,0	1/1:22,0:23:41.99:279,42,0	1/1:2,14:20:50.96:698,51,0	1/1:1,20:22:42.14:832,42,0	1/1:0,5:7:18.04:307,18,0
chr10	92117598	.	C	CGGG	2357.93	PASS	AB=0.917;AC=47;AF=0.839;AN=56;BaseQRankSum=-2.942;DP=390;FS=3.654;HRun=11;HaplotypeScore=85.7975;InbreedingCoeff=0.3574;MQ=76.63;MQ0=0;MQRankSum=-3.815;QD=6.78;ReadPosRankSum=-0.119;VQSLOD=-0.4359;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:28:41.01:41,0,140	0/1:6,0:6:0:0,0,0	0/0:17,0:16:12.63:0,13,126	0/0:18,0:17:1.21:0,1,107	0/1:7,1:9:0:0,0,0	1/1:12,1:13:6.02:102,6,0	1/1:19,2:23:20.58:221,21,0	1/1:12,1:13:9.32:107,9,0	1/1:12,0:12:12.04:151,12,0	1/1:12,0:12:11.02:92,11,0	1/1:7,1:8:7.59:104,8,0	1/1:19,0:19:2.90:50,3,0	1/1:19,0:19:6.87:54,7,0	1/1:15,2:19:14.85:171,15,0	1/1:12,2:15:10.52:159,11,0	1/1:10,7:18:2.42:183,2,0	1/1:19,1:20:5.89:61,6,0	1/1:16,2:18:12.72:135,13,0	1/1:9,0:9:8.98:81,9,0	1/1:10,1:11:14.96:195,15,0	1/1:16,1:16:7.84:81,8,0	1/1:8,1:9:12.34:128,12,0	0/0:7,0:7:0.73:0,1,5	1/1:21,2:24:23.39:225,23,0	1/1:4,0:4:2.97:20,3,0	1/1:10,0:10:1.25:3,1,0	1/1:9,0:9:6.02:77,6,0	1/1:3,0:3:3.01:38,3,0
chr10	92117608	.	G	GGT	3126.78	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=-1.838;DP=356;FS=4.349;HRun=0;HaplotypeScore=69.1696;InbreedingCoeff=0.5874;MQ=76.41;MQ0=0;MQRankSum=-3.944;QD=10.60;ReadPosRankSum=1.985;VQSLOD=3.1722;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:44.15:0,44,441	./.	0/0:17,0:16:34.31:0,34,255	0/0:15,0:14:12.76:0,13,179	1/1:5,0:8:2.90:24,3,0	1/1:3,0:10:5.38:41,5,0	1/1:6,16:23:21.04:274,21,0	1/1:2,1:16:41.68:338,42,0	1/1:10,0:11:23.70:181,24,0	1/1:8,1:9:17.68:155,18,0	1/1:1,3:6:11.91:124,12,0	1/1:4,0:15:5.29:48,5,0	1/1:10,8:20:7.72:100,8,0	1/1:6,10:16:14.86:172,15,0	1/1:4,1:13:12.02:140,12,0	1/1:12,0:13:26.83:252,27,0	1/1:3,13:18:5.12:81,5,0	1/1:3,15:19:15.03:205,15,0	1/1:1,1:9:20.23:189,20,0	1/1:3,0:9:14.86:137,15,0	1/1:1,1:13:9.03:121,9,0	1/1:6,1:8:17.69:191,18,0	1/1:3,0:5:0.80:13,1,0	1/1:6,17:26:23.81:299,24,0	1/1:2,2:5:6:55,6,0	1/1:7,0:7:2.92:20,3,0	1/1:0,0:12:6.02:73,6,0	1/1:0,0:3:3.01:36,3,0
chr10	92119057	.	CTG	C	24488.26	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=6.268;DP=659;FS=14.204;HRun=0;HaplotypeScore=102.0040;InbreedingCoeff=0.9966;MQ=89.79;MQ0=0;MQRankSum=-9.307;QD=44.12;ReadPosRankSum=6.858;VQSLOD=4.9282;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,2942	1/1:0,8:8:18.06:294,18,0	0/0:25,0:25:73.42:0,73,1317	0/0:29,0:29:77.37:0,77,1408	1/1:0,17:17:42.14:685,42,0	1/1:0,15:15:42.14:685,42,0	1/1:0,26:26:72.25:1175,72,0	1/1:0,28:28:84.29:1366,84,0	1/1:0,24:24:63.22:1028,63,0	1/1:0,21:21:60.20:979,60,0	1/1:0,12:12:27.09:441,27,0	1/1:0,15:15:42.14:685,42,0	1/1:0,24:24:57.19:930,57,0	1/1:0,31:31:87.25:1381,87,0	1/1:0,36:36:99:1762,108,0	1/1:0,19:19:48.16:783,48,0	1/1:1,25:26:69.24:1120,69,0	1/1:0,13:13:36.12:587,36,0	1/1:0,29:29:87.28:1395,87,0	1/1:0,20:20:60.20:979,60,0	1/1:0,30:30:81.28:1321,81,0	1/1:0,16:16:36.12:587,36,0	1/1:0,19:19:54.18:879,54,0	1/1:0,35:35:81.27:1322,81,0	1/1:0,22:22:54.18:881,54,0	1/1:0,17:17:51.17:826,51,0	1/1:0,32:32:87.30:1419,87,0	1/1:0,20:20:60.20:979,60,0
chr10	92119244	.	A	ATTTT	17882.69	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.833;DP=585;FS=6.559;HRun=10;HaplotypeScore=132.5427;InbreedingCoeff=0.9462;MQ=68.02;MQ0=0;MQRankSum=-6.048;QD=35.00;ReadPosRankSum=-1.609;VQSLOD=2.6225;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:85.41:0,85,1462	1/1:1,5:6:12.04:266,12,0	0/0:21,0:19:26.83:0,27,400	0/0:13,0:10:8.64:0,9,95	1/1:0,0:21:47.97:684,48,0	1/1:5,0:24:62.87:586,63,0	1/1:3,0:35:76.13:741,76,0	1/1:16,1:27:47.78:898,48,0	1/1:1,0:11:24.08:503,24,0	1/1:7,8:16:27.09:602,27,0	1/1:7,6:13:15.05:334,15,0	1/1:11,9:21:36.12:765,36,0	1/1:6,6:12:12.04:283,12,0	1/1:5,18:27:53.85:1198,54,0	1/1:11,21:33:57.19:1290,57,0	1/1:0,0:15:33.02:336,33,0	1/1:14,23:40:81.28:1802,81,0	1/1:10,16:26:51.13:1092,51,0	1/1:3,0:20:32.98:522,33,0	1/1:5,0:18:39.13:721,39,0	1/1:3,0:20:30.03:572,30,0	1/1:6,7:13:21.07:476,21,0	1/1:7,11:19:36.12:784,36,0	1/1:3,18:22:42.62:987,43,0	1/1:4,10:16:33.03:636,33,0	1/1:3,0:17:30.48:412,30,0	1/1:4,0:29:41.62:837,42,0	1/1:0,0:9:27.09:554,27,0
chr10	92119545	.	TTTTC	T	56.35	PASS	AC=2;AF=0.040;AN=50;BaseQRankSum=-2.961;DP=469;FS=2.482;HRun=0;HaplotypeScore=154.1009;InbreedingCoeff=0.4722;MQ=76.33;MQ0=7;MQRankSum=1.977;QD=2.01;ReadPosRankSum=-2.071;VQSLOD=2.1237;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,12:28:9.03:139,9,0	0/0:9,0:9:3.01:0,3,51	./.	./.	0/0:20,0:19:8.96:0,9,110	0/0:19,0:19:39.03:0,39,461	0/0:22,0:21:29.86:0,30,350	0/0:14,0:13:5.94:0,6,41	0/0:14,0:14:18.02:0,18,234	0/0:12,0:12:18.02:0,18,280	0/0:8,0:8:8.90:0,9,73	0/0:10,0:10:17.83:0,18,177	0/0:9,0:9:11.72:0,12,141	0/0:12,0:12:12.01:0,12,165	0/0:13,0:13:9.02:0,9,93	0/0:15,0:15:24.06:0,24,362	0/0:12,0:12:5.89:0,6,37	./.	0/0:19,0:16:8.97:0,9,72	0/0:20,0:19:14.89:0,15,134	0/0:19,0:19:19.21:0,19,171	0/0:16,0:15:12.04:0,12,165	0/0:20,0:19:14.90:0,15,149	0/0:21,0:21:14.79:0,15,138	0/0:12,0:12:14.88:0,15,135	0/0:22,0:22:27.02:0,27,325	0/0:30,0:29:15.05:0,15,193	0/0:21,0:21:21.01:0,21,224
chr10	92119548	.	T	TCTTTCTTC	7635.38	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=0.655;DP=464;FS=11.459;HRun=0;HaplotypeScore=168.0666;InbreedingCoeff=0.4990;MQ=70.55;MQ0=8;MQRankSum=-4.279;QD=19.78;ReadPosRankSum=2.789;VQSLOD=3.5723;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:47.84:0,48,486	0/1:8,0:8:66.63:67,0,97	0/0:17,0:10:18.02:0,18,184	0/0:23,0:19:11.41:0,11,163	1/1:18,0:16:20.71:201,21,0	1/1:21,0:21:56.21:644,56,0	1/1:22,0:21:56.81:556,57,0	1/1:16,0:15:30.04:203,30,0	1/1:12,0:12:33:491,33,0	1/1:12,0:12:16.12:162,16,0	1/1:8,0:8:23.67:170,24,0	1/1:9,0:9:21.61:153,22,0	0/1:9,0:8:1.90:108,0,2	1/1:10,0:10:29.58:209,30,0	0/1:14,0:14:12.89:215,0,13	0/1:15,0:15:68.38:136,0,68	0/0:12,0:12:9.22:0,9,187	1/1:7,0:7:14.90:109,15,0	1/1:20,0:17:44.78:354,45,0	1/1:19,0:18:38.60:373,39,0	1/1:19,0:18:47.66:419,48,0	1/1:16,0:15:38.41:258,38,0	1/1:20,0:19:44.57:331,45,0	0/1:25,0:25:99:228,0,130	1/1:11,0:11:29.71:239,30,0	1/1:4,17:25:68.84:985,69,0	1/1:30,0:29:14.99:433,15,0	1/1:20,0:20:40.78:589,41,0
chr10	92119552	.	T	TCTTCCTTC	12761.42	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-0.567;DP=454;FS=16.217;HRun=0;HaplotypeScore=149.9928;InbreedingCoeff=0.6328;MQ=65.49;MQ0=9;MQRankSum=-4.598;QD=33.15;ReadPosRankSum=4.968;VQSLOD=3.6218;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:57.05:0,57,827	0/0:6,0:6:10.34:0,10,76	0/0:15,0:8:18.05:0,18,278	0/0:20,0:16:10.51:0,11,261	1/1:2,14:15:21.07:330,21,0	1/1:21,0:21:63.05:1107,63,0	1/1:25,0:24:40.46:891,40,0	1/1:16,0:15:35.92:414,36,0	1/1:13,0:13:33.56:623,34,0	1/1:13,0:13:35.62:374,36,0	1/1:8,0:8:24.06:296,24,0	1/1:9,0:9:24.49:305,24,0	1/1:9,0:8:15.24:237,15,0	1/1:11,0:11:30.08:373,30,0	0/1:15,0:15:12.88:271,0,13	1/1:14,0:14:26.59:380,27,0	0/1:12,0:12:13.57:64,0,14	1/1:5,0:5:13.82:152,14,0	1/1:4,16:19:53.96:755,54,0	1/1:3,14:17:35.62:598,36,0	1/1:19,0:18:46.89:720,47,0	1/1:15,0:14:39.08:456,39,0	1/1:17,0:16:45.06:619,45,0	0/1:24,0:24:99:450,0,117	1/1:11,0:11:30.10:431,30,0	1/1:23,1:24:63.41:1368,63,0	1/1:6,20:26:14.92:529,15,0	1/1:19,0:19:56.54:1020,57,0
chr10	92119555	.	T	TCC	752.07	PASS	AB=0.947;AC=16;AF=0.286;AN=56;BaseQRankSum=-0.926;DP=430;FS=12.358;HRun=0;HaplotypeScore=137.6272;InbreedingCoeff=-0.2516;MQ=61.25;MQ0=9;MQRankSum=3.244;QD=2.90;ReadPosRankSum=3.239;VQSLOD=1.6786;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:60.12:0,60,842	0/0:6,0:6:18.02:0,18,234	0/0:13,0:6:18.04:0,18,227	0/1:16,0:14:16.85:17,0,187	0/1:16,0:14:16.93:17,0,55	0/1:18,3:21:88.87:186,0,89	0/1:24,0:23:15.85:16,0,160	0/0:15,0:14:41.35:0,41,282	0/1:10,3:13:75.19:75,0,82	0/0:13,0:13:10.82:0,11,85	0/1:8,0:8:2.46:2,0,95	0/0:8,1:9:9.92:0,10,106	0/0:9,0:8:15.22:0,15,80	0/0:11,0:11:0.49:0,0,102	0/0:15,0:15:5.60:0,6,32	0/0:11,2:13:7.38:0,7,109	0/0:12,0:12:36.06:0,36,499	0/1:5,0:5:6.32:6,0,69	0/1:19,0:15:41.06:41,0,76	0/1:13,2:14:27.45:27,0,123	0/1:17,0:16:65.33:65,0,107	0/1:14,0:13:17.22:17,0,128	0/0:15,1:15:35.93:0,36,157	0/1:23,1:24:21.63:22,0,128	0/0:10,0:10:8.92:0,9,116	0/1:20,2:22:99:158,0,179	1/1:19,5:23:14.95:157,15,0	0/1:17,2:19:99:101,0,102
chr10	92119556	.	T	TTC	729.96	PASS	AB=0.909;AC=15;AF=0.268;AN=56;BaseQRankSum=1.505;DP=426;FS=12.816;HRun=0;HaplotypeScore=138.4844;InbreedingCoeff=-0.1643;MQ=59.89;MQ0=9;MQRankSum=1.168;QD=2.96;ReadPosRankSum=5.462;VQSLOD=1.5632;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:57.13:0,57,825	0/0:5,0:5:15.04:0,15,197	0/0:12,0:5:15.03:0,15,198	0/1:16,0:13:56.03:56,0,138	0/1:14,0:12:22.29:22,0,38	0/1:18,3:21:67.05:162,0,67	0/1:25,0:24:31.22:31,0,158	0/1:16,0:15:2.26:2,0,152	0/1:11,3:14:71.18:71,0,95	0/0:13,0:13:15.35:0,15,123	0/0:7,0:7:19.44:0,19,124	0/1:8,1:9:3.71:4,0,71	0/0:9,0:8:21.43:0,21,119	0/0:11,0:11:26.46:0,26,150	0/1:4,0:16:12.37:41,0,12	0/0:11,2:13:14.11:0,14,126	0/0:12,0:12:35.69:0,36,355	0/0:5,0:5:14.74:0,15,117	0/1:19,0:15:40.49:40,0,81	0/1:13,2:14:27.50:27,0,116	0/1:17,0:16:39.79:40,0,115	0/0:14,0:13:29.82:0,30,202	0/0:15,1:15:38.08:0,38,193	0/0:23,1:24:35.53:0,36,236	0/0:10,0:10:9.09:0,9,123	0/1:20,2:22:99:153,0,180	1/1:19,5:23:15.04:158,15,0	0/1:16,2:18:79.04:79,0,107
chr10	92119632	.	TTG	T	63.79	PASS	AB=0.872;AC=3;AF=0.054;AN=56;BaseQRankSum=4.356;DP=329;FS=0.000;HRun=0;HaplotypeScore=88.0454;InbreedingCoeff=-0.0889;MQ=65.56;MQ0=3;MQRankSum=-3.332;QD=2.90;ReadPosRankSum=2.292;VQSLOD=1.6366;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.23:0,90,1381	0/0:4,0:4:2.61:0,3,18	0/0:36,0:22:53.47:0,53,643	0/0:30,0:17:47.36:0,47,505	0/0:12,0:12:30.83:0,31,183	0/0:6,0:6:11.10:0,11,89	0/0:13,0:11:23.56:0,24,159	0/0:11,0:10:30.06:0,30,401	0/0:9,0:9:0.06:0,0,78	0/0:10,0:9:14.92:0,15,184	0/0:6,0:6:17.68:0,18,129	0/0:7,0:7:11.34:0,11,76	0/0:11,0:10:19.55:0,20,110	0/0:8,0:8:8.52:0,9,91	0/0:10,0:10:18.92:0,19,132	0/0:11,0:11:26.47:0,26,183	0/1:11,2:13:31.17:87,0,31	0/0:8,0:8:21.39:0,21,176	0/0:10,0:9:17.65:0,18,164	0/0:9,0:8:6.39:0,6,92	0/1:4,2:6:29.93:62,0,30	0/0:10,0:10:23.47:0,23,146	0/1:3,0:3:9.48:9,0,33	0/0:12,0:11:9.21:0,9,117	0/0:6,0:6:10.87:0,11,65	0/0:20,0:19:28.99:0,29,319	0/0:11,0:11:23.38:0,23,165	0/0:4,0:4:3.19:0,3,40
chr10	92119770	.	TAA	T	17405.82	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=6.350;DP=487;FS=0.487;HRun=3;HaplotypeScore=65.5623;InbreedingCoeff=0.9871;MQ=70.32;MQ0=0;MQRankSum=-6.085;QD=41.64;ReadPosRankSum=4.014;VQSLOD=4.2985;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.32:0,93,1763	1/1:0,5:5:15.05:230,15,0	0/0:21,0:21:57.20:0,57,1086	0/0:15,0:15:42.77:0,43,763	1/1:0,20:19:48.12:692,48,0	1/1:0,21:21:54.18:827,54,0	1/1:0,22:22:51.17:781,51,0	1/1:1,20:21:60.20:919,60,0	1/1:0,15:15:45.15:689,45,0	1/1:0,14:14:42.14:628,42,0	1/1:0,17:17:48.16:735,48,0	1/1:0,10:10:24.08:367,24,0	1/1:0,15:15:42.14:642,42,0	1/1:0,11:11:30.10:459,30,0	1/1:0,16:16:45.15:689,45,0	1/1:0,12:12:27.09:413,27,0	1/1:0,18:18:54.18:826,54,0	1/1:0,21:21:60.20:919,60,0	1/1:0,13:13:39.13:578,39,0	1/1:0,21:21:63.21:964,63,0	1/1:1,36:36:99:1516,99,0	1/1:0,15:15:45.15:678,45,0	1/1:1,18:19:45.15:689,45,0	1/1:0,20:20:54.18:827,54,0	1/1:0,21:21:54.18:827,54,0	1/1:0,20:20:60.18:895,60,0	1/1:0,9:9:27.05:387,27,0	1/1:0,5:5:15.05:230,15,0
chr10	92120612	.	GTGTAT	G	631.18	PASS	AB=0.967;AC=23;AF=0.411;AN=56;BaseQRankSum=4.957;DP=551;FS=0.911;HRun=0;HaplotypeScore=193.4899;InbreedingCoeff=-0.2864;MQ=59.63;MQ0=9;MQRankSum=1.606;QD=1.70;ReadPosRankSum=-0.639;VQSLOD=2.7432;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:67.64:0,68,1904	0/0:11,0:11:21.07:0,21,369	0/0:29,0:14:42.10:0,42,1049	0/0:24,0:13:36.12:0,36,910	0/1:15,4:19:0.36:90,0,0	0/1:24,0:24:20.10:20,0,227	0/1:19,0:19:30.03:30,0,104	0/0:30,0:30:87.12:0,87,1410	1/1:16,3:19:7.52:137,8,0	0/1:15,0:14:32.56:33,0,136	0/1:14,0:14:10:10,0,14	0/1:16,0:16:14.38:14,0,16	0/1:16,0:16:14.51:15,0,66	0/1:21,0:22:5.24:5,0,39	0/0:29,0:29:43.52:0,44,687	0/1:14,0:14:3.02:3,0,148	0/0:28,0:27:27.06:0,27,431	0/1:18,0:18:3.46:3,0,96	0/1:11,0:10:18.31:51,0,18	0/1:18,0:18:26.76:34,0,27	0/1:23,0:23:22.03:22,0,30	0/1:12,2:14:16.11:16,0,111	0/1:19,0:19:14.49:16,0,14	0/1:18,0:18:6.61:12,0,7	0/1:32,0:32:28.20:50,0,28	0/1:17,2:19:28.21:92,0,28	0/1:14,4:17:9.49:98,0,9	1/1:2,1:3:7.59:40,8,0
chr10	92120614	.	GTA	G	4194.12	PASS	AB=0.970;AC=44;AF=0.786;AN=56;BaseQRankSum=7.678;DP=552;FS=3.656;HRun=0;HaplotypeScore=161.9971;InbreedingCoeff=0.3297;MQ=58.38;MQ0=9;MQRankSum=-3.863;QD=8.87;ReadPosRankSum=1.521;VQSLOD=3.2099;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:62.07:0,62,993	0/1:11,0:11:16.17:16,0,72	0/0:28,0:13:39.04:0,39,479	0/0:24,0:13:35.96:0,36,433	1/1:18,0:18:35.31:271,35,0	0/1:18,5:23:10.53:245,0,11	1/1:19,0:19:30.76:240,31,0	0/1:33,0:33:86.39:86,0,355	1/1:18,0:18:32.92:279,33,0	1/1:16,0:15:6.96:204,7,0	1/1:16,0:16:8.76:62,9,0	1/1:17,0:17:14.70:106,15,0	1/1:16,0:16:11.21:78,11,0	1/1:22,0:22:12.29:91,12,0	0/1:29,0:29:89.37:95,0,89	0/1:14,0:14:15.37:80,0,15	0/1:27,0:26:38.95:39,0,61	1/1:18,0:18:45.76:314,46,0	1/1:12,0:11:30.10:231,30,0	1/1:18,0:18:29.46:240,29,0	1/1:24,0:24:21.92:183,22,0	1/1:14,0:14:19.91:161,20,0	1/1:19,0:19:14.48:99,14,0	1/1:17,0:17:11.97:96,12,0	1/1:33,0:33:26.80:203,27,0	1/1:19,0:19:49.38:390,49,0	1/1:17,0:16:41.48:315,41,0	1/1:3,0:3:8.96:69,9,0
chr10	92120616	.	ATG	A	728.75	PASS	AB=0.970;AC=18;AF=0.321;AN=56;BaseQRankSum=4.305;DP=552;FS=6.210;HRun=0;HaplotypeScore=172.4944;InbreedingCoeff=0.3261;MQ=56.93;MQ0=9;MQRankSum=-5.302;QD=2.93;ReadPosRankSum=1.601;VQSLOD=1.7756;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:53.13:0,53,772	0/1:12,0:12:18.55:75,0,19	0/0:28,0:13:17.92:0,18,231	0/0:23,0:12:12.01:0,12,129	1/1:18,0:18:2.74:14,3,0	0/1:22,0:22:24.58:25,0,118	0/0:19,0:19:7.86:0,8,49	0/1:32,5:36:54.73:275,0,55	1/1:18,0:18:8.87:41,9,0	0/0:14,0:13:15.59:0,16,133	0/0:16,0:16:0.47:0,0,1	1/1:17,0:17:0.44:1,0,0	0/0:17,0:17:3.16:0,3,48	0/0:21,0:21:2.99:0,3,24	1/1:29,0:29:18.19:260,18,0	0/0:15,0:15:12.02:0,12,130	1/1:27,0:26:7.39:144,7,0	0/0:18,0:18:6.03:0,6,45	0/0:12,0:11:5.67:0,6,31	0/0:17,0:17:5.99:0,6,49	0/0:23,0:23:1.77:0,2,22	0/0:13,0:13:3.87:0,4,28	0/0:19,0:19:0.10:0,0,0	0/0:16,0:16:0.09:0,0,1	1/1:33,0:33:0.91:3,1,0	0/1:19,0:19:2.71:3,0,47	1/1:17,0:16:3.64:32,4,0	0/0:3,0:3:0.47:0,0,1
chr10	92120630	.	G	GTGTGTT	2449.80	PASS	AB=0.881;AC=21;AF=0.375;AN=56;BaseQRankSum=-1.410;DP=527;FS=8.214;HRun=0;HaplotypeScore=175.1053;InbreedingCoeff=0.2882;MQ=45.80;MQ0=16;MQRankSum=-6.139;QD=8.36;ReadPosRankSum=-0.137;VQSLOD=1.7880;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:52.52:0,53,1043	1/1:3,8:11:12.04:267,12,0	0/0:27,0:11:18.06:0,18,248	0/0:18,0:5:12.01:0,12,151	0/0:11,0:14:18.12:0,18,139	0/0:19,0:19:19.07:0,19,207	0/0:21,0:21:6.53:0,7,52	1/1:43,0:40:82.31:1088,82,0	0/0:12,0:14:12.01:0,12,150	0/0:11,0:10:9.09:0,9,107	1/1:16,0:16:2.52:31,3,0	1/1:18,0:18:2.88:17,3,0	0/1:21,0:21:31.77:52,0,32	0/1:22,0:22:17.88:28,0,18	0/1:8,24:34:33.35:514,0,33	0/0:13,0:13:14.64:0,15,172	0/1:11,20:30:2.70:426,0,3	0/1:17,0:17:18.72:33,0,19	0/0:6,0:5:11.83:0,12,79	0/0:14,0:13:11.85:0,12,87	0/0:17,0:16:1.79:0,2,22	0/1:12,0:12:10.70:11,0,25	1/1:20,0:20:5.92:43,6,0	0/0:13,0:13:2.08:0,2,23	1/1:31,0:31:8.99:94,9,0	0/0:14,0:15:14.15:0,14,141	0/1:11,0:14:12.81:13,0,138	1/1:1,0:2:1.56:6,2,0
chr10	92120634	.	GTGTTTGTGTGTGTGTGTATGTA	G	5545.71	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=5.536;DP=528;FS=1.146;HRun=0;HaplotypeScore=244.6866;InbreedingCoeff=0.1016;MQ=44.53;MQ0=16;MQRankSum=-1.676;QD=11.77;ReadPosRankSum=0.353;VQSLOD=3.3901;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:69.37:0,69,4070	0/1:10,0:10:24.90:25,0,198	0/0:25,0:9:14.14:0,14,195	0/1:17,0:5:5.47:5,0,196	1/1:13,0:13:20.65:286,21,0	1/1:16,4:20:35.91:790,36,0	1/1:20,0:20:18.87:158,19,0	0/1:44,0:41:99:264,0,2279	1/1:15,0:14:20.96:593,21,0	0/1:14,0:13:99:294,0,157	1/1:16,0:16:2.26:39,2,0	1/1:18,0:18:2.82:114,3,0	1/1:21,0:21:9.03:253,9,0	1/1:21,0:21:2.80:42,3,0	0/1:34,0:34:68.56:69,0,382	1/1:13,0:13:9.49:65,9,0	0/1:29,0:27:76.38:76,0,250	1/1:19,0:19:9.79:527,10,0	1/1:6,0:5:7.52:49,8,0	1/1:13,0:12:8.99:75,9,0	1/1:15,0:14:8.96:70,9,0	1/1:16,0:16:25.74:285,26,0	1/1:19,0:19:4.88:151,5,0	1/1:18,0:18:8.68:92,9,0	0/1:31,0:31:17.85:143,0,18	1/1:13,0:13:26.82:426,27,0	1/1:14,0:14:32.35:508,32,0	1/1:2,0:2:3:146,3,0
chr10	92120636	.	GTTTGTGTGTGTGTGTATGTA	G	6506.61	PASS	AB=0.930;AC=45;AF=0.804;AN=56;BaseQRankSum=5.766;DP=521;FS=2.495;HRun=0;HaplotypeScore=224.0958;InbreedingCoeff=0.1176;MQ=42.88;MQ0=16;MQRankSum=-0.668;QD=13.99;ReadPosRankSum=-0.564;VQSLOD=3.9269;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:73.72:0,74,4041	0/1:9,0:9:24.99:25,0,165	0/0:23,0:7:14.14:0,14,195	0/1:18,0:5:5.47:5,0,221	1/1:12,0:12:20.44:272,20,0	1/1:24,1:25:41.84:793,42,0	1/1:20,0:20:18.87:162,19,0	0/1:43,0:40:99:322,0,2015	1/1:15,0:14:20.96:551,21,0	0/1:14,0:13:99:373,0,151	1/1:0,16:16:2.23:83,2,0	1/1:0,17:17:2.93:158,3,0	1/1:1,20:21:9.03:384,9,0	1/1:2,19:21:2.80:86,3,0	0/1:33,0:33:68.61:69,0,258	1/1:14,0:14:11.24:120,11,0	0/1:28,0:26:99:197,0,148	1/1:19,1:20:39.77:728,40,0	1/1:5,0:4:7.53:50,8,0	1/1:12,0:11:8.99:75,9,0	1/1:13,0:12:8.96:70,9,0	1/1:14,0:16:26.62:425,27,0	1/1:0,19:19:5.11:237,5,0	1/1:18,0:18:8.21:92,8,0	0/1:1,29:30:6.24:220,0,6	1/1:10,0:10:26.82:399,27,0	1/1:14,0:14:32.35:480,32,0	1/1:2,0:2:3:132,3,0
chr10	92120650	.	GTATGTA	G	4490.04	PASS	AB=0.841;AC=42;AF=0.778;AN=54;BaseQRankSum=5.824;DP=535;FS=8.208;HRun=0;HaplotypeScore=151.2114;InbreedingCoeff=0.2510;MQ=41.86;MQ0=14;MQRankSum=-2.470;QD=10.14;ReadPosRankSum=0.640;VQSLOD=3.5669;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:81.85:0,82,2191	0/1:6,0:7:15:15,0,110	0/0:17,0:8:24.03:0,24,451	0/0:26,0:8:24.08:0,24,563	1/1:4,9:13:2.89:52,3,0	1/1:25,0:25:0:284,0,0	0/1:4,15:20:0:0,0,0	0/1:28,12:39:99:386,0,936	1/1:11,0:10:17.51:225,18,0	0/1:11,0:11:14.91:238,0,15	1/1:16,0:16:2.85:31,3,0	1/1:17,0:17:2.92:40,3,0	1/1:20,0:20:9.02:114,9,0	1/1:19,0:19:2.90:33,3,0	0/1:27,0:32:26.23:273,0,26	0/1:20,0:20:30.27:188,0,30	1/1:27,0:28:35.31:331,35,0	1/1:18,0:18:47.96:538,48,0	1/1:9,0:5:15:168,15,0	./.	1/1:15,0:14:5.89:95,6,0	1/1:14,0:14:23.66:345,24,0	1/1:20,0:19:5.86:73,6,0	1/1:18,0:18:11.93:148,12,0	1/1:29,0:30:9.03:102,9,0	1/1:2,10:12:21.73:304,22,0	1/1:18,0:18:35.70:417,36,0	1/1:7,0:7:8.58:88,9,0
chr10	92120654	.	GTA	G	2154.68	PASS	AB=0.988;AC=42;AF=0.778;AN=54;BaseQRankSum=7.146;DP=508;FS=8.438;HRun=0;HaplotypeScore=132.9317;InbreedingCoeff=0.4584;MQ=42.78;MQ0=13;MQRankSum=-2.438;QD=5.22;ReadPosRankSum=1.094;VQSLOD=2.2228;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:85.53:0,86,1353	0/0:7,0:7:5.13:0,5,45	0/0:18,0:8:24.08:0,24,426	0/0:22,0:8:24.08:0,24,421	1/1:13,0:13:2.74:16,3,0	0/1:19,0:19:11.38:97,0,11	0/1:16,0:16:0:0,0,0	0/1:38,2:37:99:110,0,451	1/1:12,0:11:17.84:103,18,0	0/1:14,0:14:1.45:109,0,1	1/1:16,0:16:2.80:15,3,0	1/1:17,0:17:2.87:15,3,0	1/1:20,0:20:8.62:46,9,0	1/1:19,0:19:2.84:16,3,0	1/1:26,0:26:9.18:191,9,0	1/1:12,0:12:17.92:139,18,0	1/1:31,0:30:28.69:232,29,0	1/1:15,0:15:35.53:236,36,0	1/1:11,0:7:20.91:165,21,0	./.	1/1:14,0:13:5.79:48,6,0	1/1:13,0:13:23.68:187,24,0	1/1:20,0:19:5.59:33,6,0	1/1:18,0:18:12.27:92,12,0	1/1:30,0:30:8.77:50,9,0	1/1:12,0:12:11.92:122,12,0	1/1:18,0:18:35.46:236,35,0	1/1:1,5:7:5.74:55,6,0
chr10	92121775	.	AAAAG	A	3556.51	PASS	AB=0.994;AC=36;AF=0.643;AN=56;BaseQRankSum=-4.063;DP=472;FS=34.244;HRun=0;HaplotypeScore=94.3174;InbreedingCoeff=-0.0847;MQ=57.86;MQ0=21;MQRankSum=-2.316;QD=8.59;ReadPosRankSum=-4.217;VQSLOD=-0.2398;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:47.90:0,48,917	1/1:8,0:8:11.75:87,12,0	0/0:25,0:6:10.03:0,10,75	0/1:31,0:12:4.21:4,0,136	0/1:30,0:30:15.56:199,0,16	1/1:10,1:11:13.58:111,14,0	1/1:20,1:20:33.99:259,34,0	1/1:33,0:31:74.58:494,75,0	0/1:14,0:14:8.25:77,0,8	0/1:13,0:13:12.88:88,0,13	0/1:14,0:14:12.87:59,0,13	0/1:13,0:13:19.22:64,0,19	0/1:15,0:15:37.20:45,0,37	0/1:14,0:13:5.61:152,0,6	1/1:15,2:17:48:372,48,0	1/1:10,0:9:13.41:70,13,0	1/1:19,4:21:56.86:583,57,0	1/1:24,0:20:2.02:143,2,0	0/1:20,0:17:1.98:138,0,2	0/1:10,1:11:15.31:67,0,15	1/1:8,0:7:10.93:75,11,0	0/1:12,0:12:25.95:41,0,26	1/1:10,0:10:8.66:123,9,0	0/1:14,0:12:5.06:10,0,5	0/0:9,0:8:0.47:0,0,1	1/1:17,1:17:18.19:195,18,0	0/1:21,0:21:64.54:88,0,65	0/1:9,0:9:12.52:13,0,13
chr10	92121776	.	AAAG	A	5541.88	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-3.008;DP=479;FS=2.987;HRun=0;HaplotypeScore=82.9247;InbreedingCoeff=0.6865;MQ=57.84;MQ0=21;MQRankSum=-1.432;QD=12.89;ReadPosRankSum=-2.760;VQSLOD=4.1313;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:47.65:0,48,740	1/1:8,0:8:1.57:27,2,0	0/0:25,0:6:9.36:0,9,62	0/1:31,0:12:1.86:2,0,126	1/1:29,1:30:59.18:406,59,0	1/1:3,8:11:17.79:206,18,0	1/1:18,3:20:49.52:410,50,0	1/1:33,0:31:62.44:392,62,0	1/1:14,0:14:34.43:215,34,0	1/1:12,1:13:28.79:204,29,0	1/1:14,1:15:18.49:119,18,0	1/1:13,0:13:18.03:114,18,0	1/1:15,0:15:29.94:241,30,0	1/1:15,1:15:32.74:295,33,0	1/1:18,0:18:42.38:317,42,0	1/1:4,6:9:17.86:198,18,0	1/1:24,0:22:56.78:460,57,0	1/1:21,2:19:30.74:273,31,0	1/1:18,3:18:35.77:356,36,0	1/1:11,0:11:15.36:164,15,0	1/1:8,0:7:17.87:137,18,0	1/1:12,0:12:9.60:109,10,0	1/1:9,1:10:25.14:167,25,0	1/1:13,1:12:10.25:72,10,0	1/1:9,0:8:2.84:14,3,0	1/1:18,0:17:44.44:305,44,0	1/1:21,0:21:21.78:219,22,0	1/1:11,0:11:15.98:121,16,0
chr10	92121777	.	AAG	A	6864.75	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=-2.200;DP=481;FS=1.476;HRun=0;HaplotypeScore=71.2984;InbreedingCoeff=0.6172;MQ=57.85;MQ0=21;MQRankSum=-0.325;QD=15.89;ReadPosRankSum=-2.562;VQSLOD=4.3584;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:47.59:0,48,597	0/1:8,0:8:9:13,0,9	0/0:25,0:6:6.28:0,6,44	0/1:32,0:12:3.65:4,0,113	1/1:23,7:30:75.05:548,75,0	1/1:10,1:11:17.98:158,18,0	1/1:18,2:19:48.26:400,48,0	1/1:34,0:32:52.72:373,53,0	1/1:13,1:14:41.88:356,42,0	1/1:1,12:13:32.51:291,33,0	1/1:15,0:15:23.63:156,24,0	1/1:13,0:13:28.92:204,29,0	1/1:14,1:15:44.05:368,44,0	1/1:15,1:15:43.84:362,44,0	1/1:19,0:19:33.66:308,34,0	1/1:9,1:9:17.96:156,18,0	1/1:24,0:22:52.01:409,52,0	1/1:22,1:19:42.79:320,43,0	1/1:18,3:18:48.24:421,48,0	1/1:10,1:11:25.96:212,26,0	1/1:7,1:7:17.87:138,18,0	1/1:9,3:12:23.61:231,24,0	1/1:8,2:10:26.66:237,27,0	1/1:11,2:11:11.96:118,12,0	1/1:1,8:8:3.01:38,3,0	1/1:2,16:17:47.85:411,48,0	1/1:19,2:21:54.11:420,54,0	1/1:11,1:12:27.91:212,28,0
chr10	92121778	.	AG	A	6557.06	PASS	AB=0.990;AC=51;AF=0.911;AN=56;BaseQRankSum=-1.526;DP=468;FS=1.505;HRun=1;HaplotypeScore=64.0761;InbreedingCoeff=0.5731;MQ=58.27;MQ0=21;MQRankSum=-1.463;QD=14.73;ReadPosRankSum=-2.319;VQSLOD=3.6575;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:43.06:0,43,435	0/1:7,0:7:4.87:5,0,27	0/1:25,0:6:1.51:2,0,32	0/1:31,1:12:2.66:3,0,102	1/1:26,2:28:72.30:530,72,0	1/1:10,1:11:17.77:125,18,0	1/1:19,1:19:47.33:348,47,0	1/1:34,0:32:71.71:386,72,0	1/1:11,3:14:41.12:290,41,0	1/1:13,0:13:32.69:277,33,0	1/1:1,14:15:23.69:156,24,0	1/1:9,2:11:29.87:256,30,0	1/1:14,1:15:44.75:356,45,0	1/1:15,1:15:44.72:356,45,0	1/1:18,1:19:35.75:313,36,0	1/1:8,1:8:17.76:118,18,0	1/1:23,1:22:45.34:364,45,0	1/1:22,1:19:44.11:342,44,0	1/1:18,2:17:50.31:377,50,0	1/1:10,0:10:26.89:214,27,0	1/1:7,0:6:17.87:138,18,0	1/1:10,1:11:26.51:201,27,0	1/1:10,0:10:26.61:206,27,0	1/1:4,8:10:11.93:104,12,0	1/1:9,0:8:2.98:22,3,0	1/1:18,0:17:47.73:363,48,0	1/1:17,3:20:57.22:463,57,0	1/1:11,1:12:30.96:242,31,0
chr10	92122076	.	C	CTCT	6574.80	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-0.544;DP=509;FS=3.946;HRun=0;HaplotypeScore=100.9612;InbreedingCoeff=0.3371;MQ=53.73;MQ0=19;MQRankSum=-5.827;QD=15.01;ReadPosRankSum=-1.063;VQSLOD=4.4458;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:56:81.08:0,81,1529	0/1:7,0:4:5.55:6,0,36	0/0:13,0:9:5.20:0,5,132	0/1:12,0:9:0.40:0,0,183	1/1:18,8:27:10.56:675,11,0	1/1:14,0:18:34.79:405,35,0	1/1:13,0:14:26.91:277,27,0	0/1:27,0:26:48.64:49,0,108	1/1:14,3:18:34.76:490,35,0	1/1:21,0:21:24.60:346,25,0	1/1:3,0:13:9.43:119,9,0	1/1:5,0:15:3.48:51,3,0	1/1:5,0:15:11.98:170,12,0	1/1:3,0:8:6.02:100,6,0	0/1:16,0:15:21.75:22,0,83	1/1:14,0:16:39.08:452,39,0	0/1:20,0:20:43.87:44,0,158	1/1:3,2:18:8.49:288,8,0	1/1:17,2:21:41.59:513,42,0	1/1:6,3:10:30:391,30,0	1/1:11,0:10:26.98:257,27,0	1/1:11,0:11:16.12:140,16,0	1/1:10,0:12:27.72:285,28,0	1/1:2,0:25:18.06:297,18,0	1/1:3,0:12:11.99:169,12,0	1/1:14,2:17:24.75:386,25,0	1/1:17,3:22:44.92:564,45,0	1/1:5,13:18:5.96:82,6,0
chr10	92122095	.	C	CT	1025.09	PASS	AB=0.917;AC=23;AF=0.411;AN=56;BaseQRankSum=5.657;DP=490;FS=1.157;HRun=7;HaplotypeScore=89.3320;InbreedingCoeff=0.6938;MQ=39.57;MQ0=27;MQRankSum=-5.516;QD=5.18;ReadPosRankSum=-0.695;VQSLOD=0.0307;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:54:98.97:0,99,932	0/1:12,0:9:0.47:0,0,66	1/1:7,0:3:1.25:4,1,0	0/0:4,0:3:2.37:0,2,8	1/1:32,0:31:21.82:160,22,0	1/1:12,7:16:24.96:292,25,0	0/1:12,6:17:1.80:224,0,2	0/0:29,0:27:16.18:0,16,332	1/1:21,0:19:14.20:70,14,0	0/0:23,0:22:32.22:0,32,356	0/0:17,0:16:23.92:0,24,213	0/0:12,0:11:12.01:0,12,113	0/0:15,0:15:6.68:0,7,185	0/0:12,0:11:15:0,15,137	0/0:17,0:16:15.35:0,15,158	1/1:8,6:13:18.05:212,18,0	0/0:17,0:16:6.64:0,7,92	0/0:19,0:17:27.01:0,27,251	1/1:20,0:20:15.35:72,15,0	1/1:11,0:11:8.52:42,9,0	1/1:2,0:3:2.84:14,3,0	0/0:18,0:16:19.99:0,20,200	0/0:12,0:12:21:0,21,195	0/0:25,0:25:20.54:0,21,193	0/0:16,0:14:14.88:0,15,144	0/1:14,0:12:14.55:42,0,15	1/1:19,0:19:11.36:56,11,0	1/1:7,0:6:6.93:31,7,0
chr10	92122102	.	T	TTTC	2678.34	PASS	AB=0.708;AC=15;AF=0.268;AN=56;BaseQRankSum=-2.130;DP=406;FS=2.559;HRun=0;HaplotypeScore=73.8610;InbreedingCoeff=0.6465;MQ=41.92;MQ0=27;MQRankSum=-4.320;QD=25.51;ReadPosRankSum=-1.624;VQSLOD=2.9967;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:51:99:0,120,1774	0/0:13,0:10:12.46:0,12,200	0/0:4,0:2:2.99:0,3,27	0/0:2,0:1:3.01:0,3,39	0/1:2,16:20:4.48:779,0,4	0/0:13,0:10:22.89:0,23,97	0/0:17,0:15:34.37:0,34,198	0/0:29,0:27:60.23:0,60,718	1/1:3,11:12:15.05:352,15,0	0/0:20,0:19:36.11:0,36,654	0/0:12,0:11:23.57:0,24,358	0/0:8,0:7:18.01:0,18,224	0/0:12,0:12:16.65:0,17,389	0/0:12,0:11:23.99:0,24,292	0/0:14,0:13:21.52:0,22,313	0/0:13,0:12:19.22:0,19,107	0/1:11,0:10:15.09:15,0,154	0/0:17,0:15:30.07:0,30,441	1/1:2,13:16:22.01:575,22,0	1/1:0,7:7:11.97:229,12,0	1/1:5,1:4:8.95:113,9,0	0/0:17,0:15:36.02:0,36,479	0/0:11,0:11:27:0,27,364	0/0:18,0:18:23.98:0,24,324	0/0:16,0:14:25.93:0,26,330	0/1:4,8:10:23.01:385,0,23	1/1:3,12:15:11.79:281,12,0	1/1:1,1:2:6.02:130,6,0
chr10	92122558	.	CCTTT	C	1050.66	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-4.168;DP=589;FS=3.610;HRun=0;HaplotypeScore=203.4245;InbreedingCoeff=0.9605;MQ=61.66;MQ0=6;MQRankSum=0.974;QD=13.64;ReadPosRankSum=-3.207;VQSLOD=3.0293;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1996	1/1:3,9:12:18.01:263,18,0	0/0:23,0:18:46.38:0,46,654	0/0:19,0:15:32.90:0,33,432	0/0:21,0:20:39.53:0,40,691	0/0:17,0:17:51.13:0,51,1109	0/0:16,0:16:45.09:0,45,808	1/1:24,0:24:29.34:381,29,0	0/0:21,0:21:57.03:0,57,812	0/0:28,0:28:40.68:0,41,939	0/0:17,0:17:9.52:0,10,599	0/0:30,0:30:45.30:0,45,1215	0/0:18,0:18:54.13:0,54,873	0/0:14,0:14:20.12:0,20,545	1/1:11,6:17:33.49:420,33,0	0/0:21,0:21:60.15:0,60,1192	1/1:3,21:24:8.97:142,9,0	0/0:14,0:14:16.24:0,16,330	0/0:28,0:28:75.16:0,75,1176	0/0:14,0:14:41.93:0,42,545	0/0:19,0:19:32.99:0,33,404	0/0:19,0:19:23.24:0,23,706	0/0:22,0:21:40.17:0,40,765	0/0:25,0:25:52.65:0,53,603	0/0:26,0:26:73.40:0,73,1220	0/0:30,0:30:71.28:0,71,1475	0/0:27,0:26:78.13:0,78,1334	0/0:9,0:9:27.05:0,27,518
chr10	92122575	.	C	CTTCCTTCC	14465.34	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=2.300;DP=596;FS=5.281;HRun=0;HaplotypeScore=232.0797;InbreedingCoeff=0.6830;MQ=45.95;MQ0=11;MQRankSum=-8.254;QD=29.89;ReadPosRankSum=-1.097;VQSLOD=3.5697;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:75.20:0,75,1560	0/0:11,0:11:14.11:0,14,430	0/0:14,0:9:9.03:0,9,134	0/0:14,0:8:9.01:0,9,91	1/1:24,0:22:47.38:921,47,0	0/1:19,0:19:99:147,0,152	0/1:22,0:22:70.29:264,0,70	1/1:23,0:23:6.93:35,7,0	1/1:19,0:19:47.84:950,48,0	1/1:32,0:32:69.53:704,70,0	1/1:18,0:18:47.99:683,48,0	1/1:33,0:33:68.17:962,68,0	1/1:19,0:19:32.93:649,33,0	1/1:14,0:14:26.97:372,27,0	0/0:14,0:13:24.07:0,24,423	0/1:16,0:16:79.46:239,0,79	0/0:24,0:24:18.04:0,18,266	1/1:12,0:12:22.87:252,23,0	1/1:26,0:26:54.01:1198,54,0	1/1:15,0:15:32.92:712,33,0	1/1:10,7:18:24:384,24,0	1/1:21,0:21:48.45:628,48,0	1/1:23,0:22:39.53:545,40,0	1/1:24,0:23:24.43:331,24,0	1/1:30,0:30:71.44:1090,71,0	1/1:34,0:34:74.85:1512,75,0	1/1:32,0:31:64.48:1337,64,0	1/1:10,0:9:24.04:551,24,0
chr10	92122585	.	T	TCC	2466.56	PASS	AB=0.850;AC=19;AF=0.339;AN=56;BaseQRankSum=4.892;DP=572;FS=6.410;HRun=0;HaplotypeScore=211.3189;InbreedingCoeff=-0.5049;MQ=42.75;MQ0=11;MQRankSum=-7.901;QD=6.00;ReadPosRankSum=7.065;VQSLOD=2.1515;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,101,1517	0/0:11,0:11:32.87:0,33,346	0/0:8,0:3:9.03:0,9,131	0/0:16,0:6:8.88:0,9,90	0/1:22,3:23:66.28:66,0,230	0/0:18,0:18:51.66:0,52,334	0/1:19,0:19:0.29:0,0,231	0/0:28,0:28:70.08:0,70,462	0/1:16,3:19:79.22:79,0,201	0/1:25,4:29:99:107,0,210	0/1:11,8:19:49.96:250,0,50	0/1:27,11:38:99:337,0,226	0/1:11,10:21:91.04:313,0,91	0/1:9,2:11:41.27:41,0,82	0/0:11,0:9:23.85:0,24,222	0/0:15,0:15:13.01:0,13,175	0/0:20,0:20:32.84:0,33,295	0/1:12,1:12:21.40:21,0,152	0/1:21,3:24:99:154,0,193	0/1:12,4:16:84.94:85,0,138	0/1:18,0:18:47.21:47,0,91	0/1:14,6:20:99:193,0,139	0/1:16,7:22:99:190,0,142	0/1:17,1:17:70.73:71,0,100	0/1:18,13:31:99:327,0,171	0/1:24,7:31:99:206,0,308	0/1:24,3:26:99:99,0,293	0/1:9,0:8:37.69:38,0,55
chr10	92122586	.	T	TTC	2194.28	PASS	AB=0.841;AC=18;AF=0.321;AN=56;BaseQRankSum=9.865;DP=571;FS=3.278;HRun=0;HaplotypeScore=215.5646;InbreedingCoeff=-0.4828;MQ=42.33;MQ0=11;MQRankSum=-11.232;QD=5.57;ReadPosRankSum=9.725;VQSLOD=1.8528;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:94.85:0,95,1487	0/0:10,0:10:29.75:0,30,308	0/0:8,0:3:9.03:0,9,133	0/0:16,0:5:5.89:0,6,80	0/1:22,0:23:28.59:29,0,310	0/0:18,0:18:34.75:0,35,301	0/0:18,0:18:33.70:0,34,286	0/0:28,0:28:70.07:0,70,452	0/1:17,0:20:79.01:79,0,211	0/1:24,4:29:84.02:84,0,270	0/1:11,8:19:59.24:252,0,59	0/1:27,11:38:99:292,0,287	0/1:10,10:20:63.82:299,0,64	0/1:9,2:11:33.48:33,0,92	0/0:12,0:10:23.70:0,24,207	0/0:14,0:14:39.68:0,40,219	0/0:20,0:20:29.79:0,30,286	0/1:12,1:12:39.32:39,0,148	0/1:20,0:23:99:113,0,202	0/1:12,0:16:93.73:94,0,150	0/1:18,0:18:10.12:10,0,121	0/1:14,6:20:99:165,0,175	0/1:16,7:22:99:161,0,165	0/1:19,1:19:86.24:86,0,94	0/1:18,13:31:99:327,0,176	0/1:24,2:31:99:177,0,330	0/1:25,0:27:76.50:76,0,319	0/1:9,0:8:37.21:37,0,56
chr10	92122606	.	T	TC	751.34	PASS	AB=0.856;AC=8;AF=0.143;AN=56;BaseQRankSum=4.906;DP=585;FS=1.039;HRun=0;HaplotypeScore=222.2239;InbreedingCoeff=-0.1824;MQ=41.13;MQ0=7;MQRankSum=-7.403;QD=4.34;ReadPosRankSum=-4.917;VQSLOD=2.4716;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:29:50.18:0,50,1026	0/0:10,0:10:17.89:0,18,144	0/0:15,0:4:11.93:0,12,142	0/0:22,0:6:8.93:0,9,82	0/1:19,3:20:99:134,0,340	0/0:16,0:16:48.13:0,48,641	0/0:15,0:15:39.99:0,40,557	0/0:39,0:39:98.96:0,99,1239	0/1:21,4:25:99:104,0,518	0/0:25,0:25:67.47:0,67,769	0/0:24,0:24:13.28:0,13,407	0/0:33,0:33:75.85:0,76,816	0/0:21,0:21:37.43:0,37,424	0/0:13,0:13:35.82:0,36,399	0/0:17,0:15:41.73:0,42,344	0/0:16,0:16:45.14:0,45,609	0/0:21,0:20:39.01:0,39,459	0/1:17,1:17:15.62:16,0,407	0/1:23,6:29:99:157,0,686	0/0:15,1:16:1.67:0,2,391	0/0:12,0:12:26.30:0,26,339	0/0:17,0:17:13.59:0,14,268	0/0:23,0:23:34.35:0,34,566	0/1:17,0:16:17.23:17,0,346	0/0:28,0:28:50.55:0,51,606	0/1:28,4:31:99:111,0,714	0/1:17,7:24:99:218,0,477	0/1:3,3:6:65.73:130,0,66
chr10	92122636	.	TC	T	1041.71	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-3.665;DP=546;FS=10.318;HRun=1;HaplotypeScore=180.3461;InbreedingCoeff=0.8994;MQ=46.75;MQ0=5;MQRankSum=-3.155;QD=14.08;ReadPosRankSum=-1.944;VQSLOD=1.6912;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.28:0,90,1333	1/1:3,1:4:5.98:57,6,0	0/0:17,1:6:1.28:0,1,124	0/0:22,0:10:19.98:0,20,245	0/0:17,1:17:30.92:0,31,261	0/0:15,0:15:43.83:0,44,327	0/0:14,0:14:34.78:0,35,244	1/1:29,1:28:57.25:442,57,0	0/0:19,1:20:23.54:0,24,243	0/0:30,0:30:88.44:0,88,1219	0/0:27,0:27:72.21:0,72,950	0/0:34,0:34:95.82:0,96,1281	0/0:14,0:14:38.71:0,39,528	0/0:18,0:18:47.61:0,48,657	1/1:16,2:19:44.94:350,45,0	0/0:11,2:13:15.96:0,16,164	1/1:19,2:20:47.51:346,48,0	0/0:18,0:18:50.38:0,50,713	0/0:15,0:14:39.27:0,39,348	0/0:15,0:13:31.42:0,31,197	0/0:9,0:9:20.62:0,21,146	0/0:15,0:15:39.10:0,39,513	0/0:22,0:22:64.17:0,64,786	0/0:26,0:24:58.35:0,58,750	0/0:27,0:27:78.11:0,78,1092	0/0:23,2:24:41.48:0,41,406	0/0:21,0:21:51.26:0,51,401	0/0:5,0:5:14.68:0,15,90
chr10	92122640	.	TC	T	4065.95	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-3.538;DP=551;FS=6.024;HRun=1;HaplotypeScore=168.7095;InbreedingCoeff=0.9208;MQ=49.13;MQ0=6;MQRankSum=-6.154;QD=16.07;ReadPosRankSum=-5.420;VQSLOD=1.6744;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.14:0,93,1293	1/1:3,0:3:5.99:58,6,0	0/0:18,0:7:15.04:0,15,136	0/0:18,2:11:20.02:0,20,238	1/1:11,6:17:31.21:281,31,0	1/1:13,4:16:21.60:267,22,0	1/1:7,5:13:14.31:180,14,0	1/1:29,1:28:63.39:493,63,0	1/1:13,6:20:49.82:358,50,0	0/0:31,0:31:84.65:0,85,1073	0/0:27,0:27:65.27:0,65,702	0/0:31,0:31:89.37:0,89,1059	0/0:14,0:14:37.61:0,38,421	0/0:19,0:19:50.26:0,50,598	1/1:18,1:19:45.89:354,46,0	1/1:5,9:14:36.26:259,36,0	1/1:20,2:21:50.53:372,51,0	0/0:18,0:18:50.31:0,50,669	1/1:10,2:11:1.28:134,1,0	1/1:15,6:19:44.43:326,44,0	1/1:5,2:8:2.18:88,2,0	0/0:16,0:16:44.67:0,45,506	0/0:23,0:23:60.61:0,61,715	0/0:26,1:25:29.82:0,30,597	0/0:23,0:23:68.60:0,69,876	1/1:20,6:26:59.44:424,59,0	1/1:15,7:22:33.65:333,34,0	1/1:5,2:7:17.85:138,18,0
chr10	92122642	.	TTTC	T	7622.15	PASS	AB=0.901;AC=38;AF=0.679;AN=56;BaseQRankSum=-1.709;DP=562;FS=0.419;HRun=0;HaplotypeScore=171.9741;InbreedingCoeff=-0.0168;MQ=49.44;MQ0=6;MQRankSum=1.925;QD=15.40;ReadPosRankSum=2.729;VQSLOD=4.4033;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.14:0,81,1312	0/1:3,0:3:0.77:15,0,1	0/0:18,0:7:5.60:0,6,64	0/0:19,0:10:13.69:0,14,206	1/1:18,0:17:32.81:364,33,0	1/1:17,0:16:22.99:341,23,0	1/1:15,0:15:17.15:282,17,0	1/1:30,0:28:48.03:394,48,0	1/1:21,0:21:48.73:488,49,0	0/1:28,2:30:81.83:392,0,82	0/1:14,13:27:44.01:394,0,44	0/1:28,4:32:12.25:557,0,12	0/1:14,2:16:42.08:134,0,42	0/1:16,3:19:8.60:313,0,9	1/1:19,0:19:0.43:166,0,0	1/1:14,1:15:31.72:365,32,0	1/1:22,0:21:1.75:184,2,0	0/1:17,1:18:63.30:258,0,63	0/1:12,1:12:2.27:166,0,2	1/1:21,0:19:39.93:419,40,0	0/1:9,0:9:4.91:92,0,5	0/1:16,1:17:19:293,0,19	0/1:17,5:22:22.81:392,0,23	1/1:25,2:25:0.21:404,0,0	0/1:21,2:23:99:103,0,192	1/1:28,0:27:54.62:489,55,0	1/1:22,1:23:36.33:460,36,0	1/1:10,0:10:17.63:156,18,0
chr10	92122643	.	TTC	T	5026.11	PASS	AB=0.977;AC=40;AF=0.714;AN=56;BaseQRankSum=-3.503;DP=558;FS=0.384;HRun=0;HaplotypeScore=168.6477;InbreedingCoeff=-0.0276;MQ=50.77;MQ0=6;MQRankSum=-0.008;QD=9.86;ReadPosRankSum=-3.570;VQSLOD=4.1178;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.17:0,81,1143	1/1:3,0:3:5.38:46,5,0	0/1:19,0:6:7.43:7,0,58	0/0:19,0:11:13.35:0,13,186	1/1:15,3:17:33.78:314,34,0	1/1:12,4:15:23.02:257,23,0	1/1:10,5:15:20.13:209,20,0	1/1:29,0:27:50:392,50,0	1/1:16,4:20:50.50:395,51,0	0/1:29,1:30:97.84:178,0,98	0/1:26,1:27:99:149,0,100	0/1:31,1:32:99:135,0,119	0/1:16,0:16:14.50:15,0,59	0/1:19,0:19:81.21:98,0,81	1/1:19,0:19:42.31:287,42,0	1/1:10,5:15:35.36:288,35,0	1/1:22,0:21:30.17:312,30,0	0/1:20,0:20:21.83:22,0,146	1/1:12,1:12:9.16:161,9,0	1/1:17,4:19:47.57:383,48,0	0/1:8,1:9:1.27:75,0,1	0/1:16,0:16:38.17:68,0,38	0/1:22,0:22:92.04:96,0,92	0/1:27,0:25:58.48:101,0,58	0/1:21,2:23:57.41:57,0,233	1/1:23,4:26:58.02:429,58,0	1/1:17,5:22:37.47:370,37,0	1/1:9,1:10:22.64:183,23,0
chr10	92122644	.	TC	T	4759.21	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-6.437;DP=543;FS=3.176;HRun=1;HaplotypeScore=154.4835;InbreedingCoeff=0.2297;MQ=51.59;MQ0=5;MQRankSum=-2.356;QD=10.37;ReadPosRankSum=-5.842;VQSLOD=0.5660;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.16:0,81,943	1/1:3,0:3:5.99:59,6,0	0/1:19,0:7:14.78:15,0,63	0/0:20,0:12:16:0,16,194	1/1:16,1:16:44.30:305,44,0	1/1:16,0:15:35.33:263,35,0	1/1:15,0:15:34.41:236,34,0	1/1:26,1:25:57.66:444,58,0	1/1:17,2:19:50.45:372,50,0	0/1:29,0:29:88.54:89,0,125	0/1:28,0:28:84.17:84,0,86	0/1:33,0:33:78.48:78,0,140	0/0:16,0:16:6.78:0,7,74	0/1:18,0:18:62.68:63,0,93	1/1:18,0:18:46.99:359,47,0	1/1:12,2:14:38.60:301,39,0	1/1:21,1:21:32.70:333,33,0	0/0:20,0:20:5.19:0,5,165	1/1:10,0:10:21.25:165,21,0	1/1:18,3:19:48.75:352,49,0	1/1:7,1:8:15.75:110,16,0	0/1:16,0:16:40.43:40,0,47	0/1:22,0:22:55.57:56,0,112	0/1:28,0:26:66.60:67,0,76	0/1:22,0:22:1.13:1,0,226	1/1:22,2:23:62.78:435,63,0	1/1:19,1:20:51.71:360,52,0	1/1:9,1:10:24.79:173,25,0
chr10	92122645	.	C	CT	4399.49	PASS	AB=0.931;AC=40;AF=0.714;AN=56;BaseQRankSum=-2.360;DP=543;FS=4.370;HRun=10;HaplotypeScore=156.0497;InbreedingCoeff=0.2964;MQ=52.90;MQ0=5;MQRankSum=1.986;QD=9.50;ReadPosRankSum=0.116;VQSLOD=2.3454;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:56.85:0,57,465	0/0:3,0:3:2.44:0,2,5	0/0:19,0:7:10.97:0,11,70	0/0:20,0:13:16.96:0,17,128	1/1:17,0:16:3.63:97,4,0	0/1:16,0:15:5.14:52,0,5	0/1:15,0:15:4.72:73,0,5	1/1:26,0:24:13.55:114,14,0	1/1:20,0:20:4.42:69,4,0	1/1:16,13:29:48.98:460,49,0	1/1:20,5:25:41.29:364,41,0	1/1:11,21:33:59.56:624,60,0	1/1:8,7:15:2.28:188,2,0	1/1:7,12:19:21.80:307,22,0	0/1:18,0:18:8.08:29,0,8	1/1:15,0:15:7.13:83,7,0	1/1:22,0:21:6.36:39,6,0	0/1:6,14:20:3.41:334,0,3	0/0:10,0:10:6.46:0,6,31	1/1:21,0:19:0.67:69,1,0	0/1:8,0:8:13.73:23,0,14	1/1:6,10:16:28.30:283,28,0	1/1:8,14:22:33.06:447,33,0	1/1:9,18:26:44.54:445,45,0	1/1:14,8:22:11.80:182,12,0	1/1:24,0:23:0.74:28,1,0	0/1:20,0:20:12.51:40,0,13	1/1:12,0:12:1.70:50,2,0
chr10	92123023	.	A	AGT	1242.36	PASS	AB=0.830;AC=42;AF=0.808;AN=52;BaseQRankSum=1.944;DP=599;FS=4.823;HRun=0;HaplotypeScore=105.0951;InbreedingCoeff=0.1156;MQ=59.27;MQ0=17;MQRankSum=-1.245;QD=2.54;ReadPosRankSum=-0.412;VQSLOD=2.0145;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:36:2.38:2,0,184	1/1:10,0:10:6.42:44,6,0	./.	./.	1/1:12,1:13:3.01:45,3,0	0/1:24,1:25:26.59:39,0,27	0/0:35,0:34:23.87:0,24,233	1/1:48,0:47:15.65:72,16,0	0/1:16,6:23:17.56:163,0,18	1/1:21,0:21:2.36:39,2,0	1/1:14,0:14:3:25,3,0	1/1:13,0:14:14.54:117,15,0	1/1:10,0:10:5.45:36,5,0	1/1:19,0:19:3.27:14,3,0	1/1:21,0:21:2.99:23,3,0	0/0:13,0:12:9.02:0,9,98	1/1:26,0:26:6:58,6,0	1/1:21,0:19:4.24:27,4,0	1/1:23,0:23:9.01:96,9,0	1/1:6,5:10:3.01:45,3,0	0/1:23,11:37:48.47:95,0,48	1/1:11,0:11:3:25,3,0	1/1:8,0:11:2.97:20,3,0	0/1:22,1:29:0:0,0,0	1/1:9,0:12:3:26,3,0	1/1:21,1:22:7.36:71,7,0	1/1:9,7:16:9.03:134,9,0	0/1:9,5:14:7.01:163,0,7
chr10	92123044	.	G	GTC	282.20	PASS	AB=0.959;AC=9;AF=0.161;AN=56;BaseQRankSum=2.084;DP=616;FS=10.112;HRun=0;HaplotypeScore=95.9379;InbreedingCoeff=-0.0069;MQ=50.38;MQ0=26;MQRankSum=1.154;QD=1.76;ReadPosRankSum=5.055;VQSLOD=0.7931;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:74.33:0,74,703	1/1:8,0:8:5.65:31,6,0	0/0:28,0:6:14.85:0,15,118	0/0:40,0:13:31.98:0,32,266	0/0:12,0:12:6.26:0,6,172	0/0:26,0:26:30.23:0,30,388	0/0:40,0:38:86.92:0,87,852	0/1:45,0:42:99:148,0,452	0/1:22,0:21:43.92:44,0,245	0/0:17,0:17:30.34:0,30,285	0/0:16,0:16:15.53:0,16,134	0/0:13,0:13:9.12:0,9,139	0/0:16,0:15:7.56:0,8,51	0/0:19,0:19:41.34:0,41,303	0/1:13,8:22:24.07:24,0,80	0/0:11,0:10:29.99:0,30,306	0/1:28,0:28:73.01:73,0,114	0/0:23,0:21:48.29:0,48,347	0/0:22,0:20:35.73:0,36,386	0/1:10,0:9:8.68:9,0,62	0/0:36,0:36:14.46:0,14,383	0/0:9,0:9:4.06:0,4,19	0/0:18,0:18:19.77:0,20,166	0/0:37,0:35:38.48:0,38,300	0/0:16,0:15:11.09:0,11,138	0/0:20,0:20:28.80:0,29,323	0/1:15,0:15:33.12:33,0,133	0/1:10,0:10:58.73:59,0,103
chr10	92123918	.	TTTGCTGTTCTCCTTAGCAGTTAGGAGCATAAACCTATA	T	31479.60	PASS	AC=38;AF=0.731;AN=52;BaseQRankSum=14.206;DP=460;FS=5.666;HRun=0;HaplotypeScore=456.4809;InbreedingCoeff=0.8681;MQ=91.62;MQ0=0;MQRankSum=-11.998;QD=116.16;ReadPosRankSum=9.587;VQSLOD=2.2493;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,14385	0/0:11,0:11:27.09:0,27,3559	0/0:28,0:28:81.27:0,81,5415	0/0:21,0:21:54.18:0,54,3957	1/1:2,7:10:21.07:1697,21,0	1/1:7,7:14:18.06:1774,18,0	./.	0/0:40,0:40:99:0,120,10408	1/1:8,5:13:12.04:1183,12,0	1/1:8,17:25:51.15:3765,51,0	1/1:4,6:10:9.03:887,9,0	1/1:9,6:14:15.05:1478,15,0	1/1:4,9:13:21.07:2070,21,0	1/1:4,6:10:12.04:1183,12,0	0/0:23,0:23:69.24:0,69,10415	1/1:7,14:21:30.10:2957,30,0	0/0:20,0:20:57.20:0,57,8588	1/1:7,5:12:12.04:1183,12,0	1/1:4,3:7:9.03:639,9,0	1/1:4,15:19:36.12:3290,36,0	1/1:6,2:8:3.01:264,3,0	1/1:7,9:16:21.07:1851,21,0	1/1:5,11:16:11.83:1183,12,0	1/1:8,3:11:2.55:295,3,0	1/1:8,6:14:6.02:591,6,0	1/1:5,7:12:21.07:1640,21,0	1/1:8,17:24:35.66:3548,36,0	./.
chr10	92126380	.	A	ACCC	4327.02	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-6.640;DP=633;FS=6.036;HRun=4;HaplotypeScore=89.9798;InbreedingCoeff=0.9968;MQ=78.64;MQ0=0;MQRankSum=-1.069;QD=52.13;ReadPosRankSum=-0.508;VQSLOD=4.0952;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,138,2070	1/1:0,8:8:18.06:373,18,0	0/0:18,0:18:39.04:0,39,534	0/0:13,0:13:23.98:0,24,308	0/0:23,0:23:63.21:0,63,964	0/0:17,0:17:42.14:0,42,644	0/0:34,0:34:99:0,99,1472	1/1:5,18:26:63.15:1235,63,0	0/0:13,0:13:39.13:0,39,598	0/0:27,0:27:75.24:0,75,1113	0/0:11,0:11:33.10:0,33,483	0/0:32,0:32:93.30:0,93,1402	0/0:19,0:19:57.19:0,57,870	0/0:21,0:21:57.19:0,57,872	1/1:0,16:16:45.11:958,45,0	0/0:13,0:13:33.11:0,33,506	1/1:2,30:33:81.23:1762,81,0	0/0:24,0:24:69.23:0,69,1058	0/0:13,0:13:36.11:0,36,532	0/0:18,0:18:48.15:0,48,714	0/0:54,0:54:99:0,154,2323	0/0:12,0:12:30.10:0,30,456	0/0:15,0:15:42.14:0,42,639	0/0:32,0:32:93.32:0,93,1421	0/0:18,0:18:45.14:0,45,670	0/0:24,0:24:60.17:0,60,897	0/0:27,0:25:72.22:0,72,1083	0/0:17,0:17:39.13:0,39,598
chr10	92126636	.	GAA	G	2478.90	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.950;DP=597;FS=10.439;HRun=11;HaplotypeScore=78.1304;InbreedingCoeff=0.9771;MQ=64.57;MQ0=2;MQRankSum=-0.690;QD=21.56;ReadPosRankSum=0.895;VQSLOD=2.1621;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:51:99:0,137,1972	1/1:0,7:7:11.77:112,12,0	0/0:14,0:12:36.09:0,36,468	0/0:7,0:6:11.64:0,12,89	0/0:18,0:20:50.64:0,51,679	0/0:20,0:22:53.74:0,54,659	0/0:19,0:20:53.14:0,53,715	1/1:4,30:31:81.14:837,81,0	0/0:16,0:17:39.10:0,39,532	0/0:21,0:21:54.10:0,54,763	0/0:15,0:15:36.12:0,36,551	0/0:19,0:20:50.62:0,51,685	0/0:19,0:21:53.67:0,54,770	0/0:16,0:17:47.64:0,48,677	1/1:4,24:28:62.99:670,63,0	0/0:7,0:7:15.04:0,15,209	1/1:5,41:46:96.22:1017,96,0	0/0:19,0:22:56.67:0,57,805	0/0:23,0:23:56.12:0,56,762	0/0:18,0:18:51.16:0,51,760	0/0:19,0:19:53.21:0,53,785	0/0:14,0:15:44.62:0,45,608	0/0:15,0:17:50.65:0,51,711	0/0:27,0:27:66.17:0,66,934	0/0:21,0:21:54.17:0,54,810	0/0:25,0:27:65.98:0,66,922	0/0:14,0:16:47.13:0,47,651	0/0:21,0:23:63.18:0,63,904
chr10	92126753	.	G	GTGT	2827.84	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-4.611;DP=558;FS=3.447;HRun=0;HaplotypeScore=121.6258;InbreedingCoeff=0.9553;MQ=77.42;MQ0=2;MQRankSum=-1.738;QD=34.91;ReadPosRankSum=-2.798;VQSLOD=3.4952;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,2246	1/1:3,0:11:23.49:341,23,0	0/0:29,0:27:72.05:0,72,965	0/0:33,0:33:76.26:0,76,1087	0/0:13,0:13:17.49:0,17,243	0/0:19,0:19:51.17:0,51,460	0/0:27,0:27:22.12:0,22,525	1/1:0,27:28:75.24:1373,75,0	0/0:19,0:19:52.71:0,53,469	0/0:20,0:20:35.77:0,36,402	0/0:11,0:11:31.52:0,32,292	0/0:21,0:21:58.42:0,58,513	0/0:9,0:9:27.04:0,27,264	0/0:18,0:18:20.61:0,21,329	1/1:6,0:17:33.74:577,34,0	0/0:10,0:10:30.03:0,30,277	1/1:11,0:23:50.95:697,51,0	0/0:22,0:22:57.23:0,57,485	0/0:20,0:20:43.01:0,43,352	0/0:16,0:16:40.70:0,41,342	0/0:29,0:29:79.89:0,80,737	0/0:14,0:14:40.61:0,41,384	0/0:16,0:16:45.19:0,45,451	0/0:17,0:17:25.97:0,26,423	0/0:9,0:9:4.38:0,4,155	0/0:24,0:24:64.30:0,64,534	0/0:26,0:26:74.81:0,75,699	0/0:8,0:8:23.08:0,23,215
chr10	92126754	.	G	GT	538.60	PASS	AB=0.636;AC=5;AF=0.089;AN=56;BaseQRankSum=6.101;DP=559;FS=0.590;HRun=0;HaplotypeScore=105.0545;InbreedingCoeff=0.7352;MQ=77.43;MQ0=2;MQRankSum=0.002;QD=10.99;ReadPosRankSum=-0.644;VQSLOD=3.5493;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,1724	1/1:3,8:11:6.58:131,7,0	0/0:29,0:27:64.56:0,65,808	0/0:34,0:33:65.52:0,66,928	0/0:12,0:12:34.40:0,34,179	0/0:18,0:18:51.43:0,51,265	0/0:27,0:27:27.16:0,27,301	0/0:34,0:32:25.20:0,25,110	0/0:19,0:19:54.33:0,54,286	0/0:20,0:20:51.83:0,52,241	0/0:11,0:11:27.13:0,27,148	0/0:21,0:21:60.19:0,60,325	0/0:9,0:9:25.97:0,26,145	0/0:17,0:17:25.29:0,25,215	1/1:6,11:17:7.09:255,7,0	0/0:10,0:10:28.41:0,28,140	0/1:9,12:21:2:266,0,2	0/0:22,0:22:59.81:0,60,302	0/0:20,0:20:55.21:0,55,272	0/0:16,0:16:45.72:0,46,235	0/0:29,0:29:82.65:0,83,415	0/0:14,0:14:40.15:0,40,215	0/0:16,0:16:46.13:0,46,277	0/0:18,0:18:48.88:0,49,263	0/0:9,0:9:3.47:0,3,83	0/0:25,0:25:65.87:0,66,307	0/0:26,0:26:74.61:0,75,392	0/0:8,0:8:23.03:0,23,124
chr10	92129390	.	T	TACACACAC	4088.48	PASS	AB=0.821;AC=29;AF=0.604;AN=48;BaseQRankSum=-4.188;DP=522;FS=12.561;HRun=0;HaplotypeScore=178.0810;InbreedingCoeff=0.5274;MQ=50.83;MQ0=7;MQRankSum=-5.734;QD=14.25;ReadPosRankSum=-3.431;VQSLOD=1.4907;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:34:45.15:0,45,1018	0/0:8,0:10:27.09:0,27,612	./.	0/0:13,0:5:2.68:0,3,74	0/0:21,5:28:0.74:0,1,2	1/1:17,0:16:11.95:239,12,0	1/1:32,0:41:9.90:238,10,0	0/0:3,0:18:1.99:0,2,81	0/0:8,4:14:0.47:0,0,1	1/1:10,3:16:23.29:593,23,0	./.	1/1:12,6:19:2.85:432,3,0	1/1:5,0:8:3.01:95,3,0	1/1:11,3:14:2.04:6,2,0	0/0:18,0:19:24.08:0,24,580	1/1:14,0:15:9.03:313,9,0	0/0:33,0:38:91.53:0,92,2095	1/1:12,7:19:12.04:431,12,0	1/1:4,2:6:9.03:312,9,0	1/1:10,6:19:9.01:217,9,0	1/1:24,0:23:2.97:87,3,0	./.	0/0:7,5:15:0.47:0,0,1	1/1:28,5:38:3.07:124,3,0	1/1:5,4:13:6.02:247,6,0	0/1:17,1:23:31.75:594,0,32	1/1:6,3:12:6.02:161,6,0	./.
chr10	92129574	.	A	AG	182.79	PASS	AB=0.829;AC=2;AF=0.036;AN=56;BaseQRankSum=1.380;DP=417;FS=9.386;HRun=0;HaplotypeScore=69.9145;InbreedingCoeff=-0.0452;MQ=58.45;MQ0=14;MQRankSum=-0.807;QD=6.30;ReadPosRankSum=0.429;VQSLOD=2.3916;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:47.90:0,48,482	0/0:10,0:10:23.85:0,24,248	0/0:38,1:8:19.47:0,19,216	0/0:54,0:19:23.71:0,24,173	0/0:14,0:13:21.64:0,22,142	0/0:8,0:8:14.21:0,14,128	0/0:18,0:17:27.63:0,28,315	0/1:12,13:21:27.14:257,0,27	0/0:10,0:10:12.15:0,12,79	0/0:10,0:10:24.83:0,25,169	0/0:14,0:14:13.43:0,13,195	0/0:11,0:11:25.87:0,26,172	0/0:8,0:8:17.74:0,18,124	0/0:8,0:8:11.75:0,12,73	0/0:7,0:7:19.96:0,20,161	0/0:15,0:14:20.24:0,20,211	0/0:20,0:19:43.16:0,43,387	0/0:19,0:19:20.61:0,21,143	0/0:19,0:15:35.85:0,36,294	0/0:10,0:10:23.70:0,24,140	0/0:10,0:9:7.85:0,8,68	0/1:4,0:4:4.55:5,0,38	0/0:6,0:6:8.84:0,9,56	0/0:16,0:15:33.10:0,33,233	0/0:6,0:5:8.85:0,9,61	0/0:17,0:16:28.27:0,28,233	0/0:7,0:7:12.30:0,12,92	0/0:9,0:9:12.32:0,12,91
chr10	92129682	.	G	GA	973.03	PASS	AB=0.741;AC=6;AF=0.107;AN=56;BaseQRankSum=-4.293;DP=549;FS=20.122;HRun=10;HaplotypeScore=59.2494;InbreedingCoeff=0.5973;MQ=58.91;MQ0=8;MQRankSum=2.504;QD=13.90;ReadPosRankSum=2.595;VQSLOD=2.0370;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,1:45:74.89:0,75,808	1/1:1,8:9:22.44:210,22,0	0/0:14,0:3:5.99:0,6,49	0/0:20,0:14:28.83:0,29,230	0/0:28,0:27:68.88:0,69,562	0/0:12,0:13:37.99:0,38,301	0/0:27,0:24:56.91:0,57,464	0/0:25,0:24:62.42:0,62,499	0/0:13,0:13:35.96:0,36,295	0/0:18,2:19:9.91:0,10,283	0/0:13,0:12:32.96:0,33,271	0/0:18,0:17:37.77:0,38,300	0/0:15,0:15:35.94:0,36,295	0/0:22,1:23:57.66:0,58,488	0/1:3,6:9:3.49:171,0,3	0/0:14,0:15:31.99:0,32,252	1/1:9,28:35:67.05:704,67,0	0/0:25,0:25:49.17:0,49,479	0/0:25,0:19:44.89:0,45,363	0/0:13,1:14:0.96:0,1,212	0/0:14,0:14:31.77:0,32,250	0/0:13,0:13:35.96:0,36,296	0/0:7,0:7:11.95:0,12,98	0/0:32,1:33:35.91:0,36,485	0/0:12,0:11:23.95:0,24,196	0/1:12,2:15:22.97:23,0,236	0/0:26,0:25:65.90:0,66,541	0/0:14,0:15:43.98:0,44,350
chr10	92130931	.	AGTTAGG	A	4555.38	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.483;DP=643;FS=4.436;HRun=0;HaplotypeScore=141.3961;InbreedingCoeff=0.9987;MQ=84.45;MQ0=0;MQRankSum=-12.081;QD=64.16;ReadPosRankSum=-2.825;VQSLOD=4.6338;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.25:0,81,2823	1/1:1,7:8:24.06:526,24,0	0/0:19,0:19:51.17:0,51,1667	0/0:24,0:24:69.23:0,69,2016	0/0:24,0:24:72.23:0,72,2354	0/0:24,0:24:72.23:0,72,2511	0/0:52,0:52:99:0,151,5337	1/1:5,18:23:60.21:1384,60,0	0/0:24,0:24:63.22:0,63,2262	0/0:30,0:30:87.30:0,87,3098	0/0:11,0:11:33.11:0,33,1146	0/0:18,0:18:54.19:0,54,1926	0/0:12,0:12:36.12:0,36,1297	0/0:21,0:21:60.21:0,60,2093	1/1:3,20:23:66.23:1582,66,0	0/0:22,0:22:63.22:0,63,2272	1/1:2,15:17:45.15:1064,45,0	0/0:32,0:32:93.32:0,93,3349	0/0:8,0:8:24.08:0,24,831	0/0:14,0:14:42.14:0,42,1511	0/0:43,0:43:99:0,126,4509	0/0:20,0:20:60.21:0,60,2155	0/0:22,0:22:66.18:0,66,2281	0/0:29,0:29:81.28:0,81,2885	0/0:25,0:25:72.23:0,72,2511	0/0:26,0:26:78.25:0,78,2705	0/0:30,0:30:87.30:0,87,3134	0/0:14,0:14:36.12:0,36,1298
chr10	92130972	.	T	TG	3421.48	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=1.334;DP=634;FS=0.440;HRun=1;HaplotypeScore=75.8931;InbreedingCoeff=0.9921;MQ=81.92;MQ0=0;MQRankSum=-6.577;QD=39.33;ReadPosRankSum=-0.027;VQSLOD=4.0301;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.22:0,72,922	1/1:1,7:8:21.07:314,21,0	0/0:21,0:22:59.04:0,59,725	0/0:16,0:16:48.13:0,48,569	0/0:15,0:15:45.15:0,45,583	0/0:20,0:20:60.19:0,60,778	0/0:35,0:35:96.27:0,96,1203	1/1:3,29:32:87.26:1254,87,0	0/0:22,0:22:66.21:0,66,855	0/0:28,0:28:84.27:0,84,1091	0/0:6,0:6:18.06:0,18,234	0/0:18,0:18:51.17:0,51,662	0/0:17,0:17:50.98:0,51,571	0/0:26,0:26:72.22:0,72,916	1/1:0,25:25:66.22:986,66,0	0/0:27,0:26:78.24:0,78,998	1/1:0,22:22:60.17:868,60,0	0/0:36,0:36:99:0,105,1323	0/0:17,0:17:45.10:0,45,537	0/0:10,0:10:30.08:0,30,374	0/0:45,0:45:99:0,129,1627	0/0:20,0:20:57.18:0,57,739	0/0:20,0:20:60.20:0,60,779	0/0:28,0:28:81.22:0,81,1032	0/0:25,0:25:72.23:0,72,932	0/0:29,0:29:75.23:0,75,961	0/0:35,0:35:99:0,102,1309	0/0:5,0:5:15.05:0,15,195
chr10	92131135	.	TTTTGTTTG	T	8529.72	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=11.609;DP=740;FS=12.215;HRun=0;HaplotypeScore=197.8124;InbreedingCoeff=0.9976;MQ=67.46;MQ0=2;MQRankSum=-14.378;QD=37.58;ReadPosRankSum=-0.615;VQSLOD=3.4932;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,129,5098	0/0:5,0:12:24.05:0,24,798	0/0:28,0:25:42.14:0,42,1539	0/0:31,0:28:45.15:0,45,1623	0/0:23,0:23:48.14:0,48,1808	0/0:29,0:29:66.23:0,66,2748	0/0:29,0:29:75.26:0,75,2928	0/0:26,0:36:75.26:0,75,2308	0/0:29,0:29:78.25:0,78,3066	1/1:12,25:37:74.88:1897,75,0	1/1:4,14:18:30.03:550,30,0	1/1:6,21:27:60.21:1521,60,0	1/1:4,15:19:30.10:777,30,0	1/1:8,19:27:36.12:926,36,0	0/0:10,0:32:75.26:0,75,2456	0/0:27,0:27:69.24:0,69,2819	0/0:9,0:33:63.22:0,63,2202	1/1:5,12:17:18.06:417,18,0	0/0:21,0:21:36.12:0,36,1402	0/0:13,0:13:36.12:0,36,1330	0/0:48,0:48:99:0,105,4230	1/1:6,12:18:36.08:672,36,0	1/1:5,10:15:23.99:495,24,0	1/1:10,20:30:24.39:503,24,0	1/1:5,14:19:33.11:772,33,0	0/0:31,0:31:75.24:0,75,2823	0/0:28,0:27:57.19:0,57,2211	0/0:11,0:11:30.07:0,30,1059
chr10	92131737	.	T	TAAAC	19431.32	PASS	AB=0.590;AC=35;AF=0.625;AN=56;BaseQRankSum=-4.298;DP=779;FS=6.145;HRun=0;HaplotypeScore=132.6546;InbreedingCoeff=0.9180;MQ=66.34;MQ0=2;MQRankSum=-4.504;QD=37.01;ReadPosRankSum=1.082;VQSLOD=4.8323;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:72.25:0,72,1156	0/0:10,0:10:21.07:0,21,337	0/0:18,0:15:18.04:0,18,243	0/0:23,0:22:30.07:0,30,445	1/1:18,1:33:48.63:860,49,0	0/0:16,0:16:27.08:0,27,410	0/0:31,0:31:45.15:0,45,721	0/0:37,0:37:54.17:0,54,823	1/1:17,0:31:45.15:829,45,0	1/1:13,28:44:99:2199,99,0	1/1:5,8:13:24.08:577,24,0	1/1:10,26:38:18.07:1462,18,0	1/1:4,22:27:51.09:1227,51,0	1/1:7,12:19:33.11:794,33,0	0/0:28,0:28:69.19:0,69,1036	0/0:24,0:24:63.19:0,63,963	0/0:38,0:38:84.09:0,84,1259	0/1:7,16:23:6.01:896,0,6	1/1:15,1:21:36.07:591,36,0	1/1:11,1:34:69.20:1179,69,0	1/1:22,0:22:15.05:305,15,0	1/1:11,26:38:75.13:1631,75,0	1/1:10,18:29:54.14:1246,54,0	1/1:9,33:44:84.29:2022,84,0	1/1:6,24:32:63.22:1516,63,0	1/1:26,2:41:66.23:1268,66,0	1/1:19,1:33:38.77:691,39,0	1/1:2,0:2:6.02:138,6,0
chr10	92132033	.	CG	C	6582.64	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.663;DP=667;FS=2.690;HRun=3;HaplotypeScore=67.6538;InbreedingCoeff=0.9996;MQ=85.86;MQ0=0;MQRankSum=-1.942;QD=31.05;ReadPosRankSum=-0.008;VQSLOD=4.5764;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1487	0/0:9,0:9:27.09:0,27,384	0/0:21,0:21:54.13:0,54,684	0/0:23,0:23:42.06:0,42,674	1/1:4,14:18:29.29:328,29,0	0/0:19,0:19:57.11:0,57,742	0/0:26,0:26:72.16:0,72,957	1/1:1,31:32:90.10:1014,90,0	1/1:1,23:24:63.20:775,63,0	0/0:20,0:20:60.15:0,60,822	0/0:13,0:13:36.12:0,36,510	0/0:24,0:24:72.20:0,72,964	0/0:26,0:26:72.22:0,72,1012	0/0:24,0:24:66.19:0,66,912	0/0:33,0:33:99:0,99,1332	0/0:37,0:37:99:0,108,1501	0/0:37,0:37:99:0,105,1473	0/0:15,0:15:42.14:0,42,604	1/1:1,17:18:47.75:513,48,0	1/1:0,13:13:36.05:426,36,0	1/1:2,52:54:99:1819,147,0	0/0:21,0:21:57.16:0,57,771	0/0:18,0:18:51.11:0,51,689	0/0:31,0:31:93.28:0,93,1300	0/0:20,0:20:57.18:0,57,798	1/1:2,22:24:40.65:669,41,0	1/1:0,18:18:54.17:668,54,0	1/1:1,10:11:30.09:371,30,0
chr10	92132270	.	T	TG	249.82	PASS	AB=0.735;AC=5;AF=0.089;AN=56;BaseQRankSum=-0.143;DP=560;FS=3.391;HRun=0;HaplotypeScore=87.9339;InbreedingCoeff=0.3302;MQ=66.19;MQ0=2;MQRankSum=0.030;QD=3.57;ReadPosRankSum=-0.272;VQSLOD=2.7279;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,119,1059	0/0:8,0:8:22.57:0,23,221	0/0:18,0:9:15.57:0,16,155	0/0:14,0:11:4.65:0,5,164	0/0:24,0:24:53.19:0,53,442	0/1:5,9:15:11.74:96,0,12	1/1:4,18:23:17.81:203,18,0	0/0:24,0:24:71.89:0,72,612	0/0:17,0:17:29.21:0,29,290	0/0:32,0:32:53.71:0,54,628	0/0:11,0:11:31.65:0,32,261	0/0:17,0:17:38.84:0,39,310	0/0:21,0:21:47.48:0,47,413	0/1:12,0:12:11.44:11,0,131	0/0:21,0:21:55.10:0,55,477	0/1:7,13:20:26.53:59,0,27	0/0:31,0:31:77.03:0,77,662	0/0:15,0:15:13.88:0,14,278	0/0:15,0:15:21.54:0,22,265	0/0:16,0:16:29.98:0,30,254	0/0:16,0:16:41.46:0,41,348	0/0:15,0:15:38.51:0,39,342	0/0:19,0:19:23.50:0,24,342	0/0:17,0:17:39.01:0,39,362	0/0:21,0:21:48.02:0,48,452	0/0:24,0:24:42.06:0,42,415	0/0:24,0:23:48.42:0,48,413	0/0:25,0:25:30.27:0,30,432
chr10	92132362	.	A	ATG	15480.54	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-3.311;DP=597;FS=0.304;HRun=0;HaplotypeScore=72.2401;InbreedingCoeff=0.9891;MQ=75.26;MQ0=0;MQRankSum=1.916;QD=51.60;ReadPosRankSum=0.631;VQSLOD=5.6308;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1589	1/1:1,12:13:36.12:674,36,0	0/0:17,0:17:48.16:0,48,682	0/0:11,0:11:30.10:0,30,406	1/1:1,29:30:81.28:1512,81,0	0/0:16,0:16:48.16:0,48,706	0/0:8,0:8:24.08:0,24,353	1/1:0,38:38:99:2054,114,0	1/1:1,21:22:63.22:1180,63,0	0/0:25,0:25:69.23:0,69,1000	0/0:14,0:14:42.13:0,42,599	0/0:17,0:17:51.17:0,51,751	0/0:21,0:21:60.20:0,60,882	0/0:23,0:23:57.19:0,57,839	1/1:0,29:29:84.29:1572,84,0	0/0:21,0:20:60.19:0,60,864	1/1:1,29:30:78.27:1461,78,0	0/0:22,0:22:63.21:0,63,927	1/1:2,14:16:45.15:842,45,0	1/1:0,24:24:72.25:1346,72,0	1/1:0,20:20:57.20:1067,57,0	0/0:9,0:9:24.08:0,24,353	0/0:22,0:22:66.19:0,66,947	0/0:16,0:16:48.16:0,48,707	0/0:18,0:18:51.16:0,51,732	1/1:4,27:32:7.90:1507,8,0	1/1:1,27:29:81.28:1497,81,0	1/1:4,13:17:42.14:769,42,0
chr10	92132767	.	GCCTC	G	10668.64	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=1.360;DP=416;FS=15.861;HRun=0;HaplotypeScore=79.1247;InbreedingCoeff=0.7052;MQ=71.80;MQ0=2;MQRankSum=-3.684;QD=28.60;ReadPosRankSum=3.358;VQSLOD=3.6465;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:43.39:0,43,1041	1/1:1,6:7:12.04:201,12,0	0/0:15,0:12:15.52:0,16,325	0/1:11,0:10:15.42:15,0,286	1/1:5,13:18:30.10:501,30,0	1/1:4,8:12:21.07:351,21,0	1/1:8,8:16:18.06:297,18,0	1/1:10,6:16:18.05:277,18,0	1/1:4,13:16:33.11:552,33,0	1/1:3,5:8:15.02:214,15,0	1/1:4,5:9:15.05:251,15,0	1/1:3,10:13:24.08:401,24,0	1/1:2,11:12:24.08:401,24,0	1/1:5,11:16:27.09:451,27,0	1/1:2,10:11:24.08:401,24,0	1/1:4,12:16:30.10:501,30,0	1/1:3,16:19:48.16:802,48,0	1/1:3,12:15:36.12:602,36,0	1/1:5,9:14:27.09:448,27,0	1/1:5,11:16:27.09:451,27,0	1/1:15,14:29:35.71:601,36,0	1/1:1,13:14:24.08:401,24,0	1/1:3,6:9:6.02:101,6,0	1/1:4,6:10:15.05:251,15,0	1/1:1,9:10:15.05:251,15,0	1/1:3,21:24:57.19:946,57,0	1/1:3,15:18:39.13:651,39,0	1/1:3,8:10:21.07:351,21,0
chr10	92135515	.	A	AGCTTG	17116.50	PASS	AB=0.773;AC=16;AF=0.286;AN=56;BaseQRankSum=-12.235;DP=820;FS=2.494;HRun=0;HaplotypeScore=143.9309;InbreedingCoeff=0.8246;MQ=86.54;MQ0=0;MQRankSum=-7.515;QD=66.60;ReadPosRankSum=1.233;VQSLOD=6.0387;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,157,3330	0/0:8,0:8:24.08:0,24,521	0/0:29,0:29:84.25:0,84,1673	0/0:30,0:30:74.66:0,75,1430	1/1:8,17:29:66.10:1636,66,0	0/0:31,0:31:90.31:0,90,1955	0/0:36,0:36:99:0,105,2176	0/0:39,0:39:99:0,99,2032	1/1:4,19:26:60.20:1782,60,0	0/0:24,0:24:63.22:0,63,1349	0/0:26,0:26:72.25:0,72,1558	0/0:23,0:23:69.24:0,69,1492	0/0:13,0:13:30.10:0,30,646	0/0:35,0:35:99:0,105,2222	0/0:29,0:29:81.26:0,81,1719	0/1:24,1:25:22.98:23,0,1384	0/0:42,0:42:99:0,120,2559	0/0:33,0:33:93.28:0,93,1961	1/1:8,18:29:81.28:2357,81,0	1/1:6,28:35:99:2849,99,0	1/1:5,23:30:66.14:1942,66,0	0/0:30,0:30:87.30:0,87,1878	0/0:19,0:19:57.20:0,57,1224	0/0:38,0:38:99:0,111,2363	0/0:23,0:23:66.23:0,66,1396	0/1:9,19:31:99:2253,0,105	1/1:3,39:42:99:3588,117,0	1/1:1,7:10:24.04:686,24,0
chr10	92136214	.	TC	T	1960.04	PASS	AB=0.849;AC=20;AF=0.357;AN=56;BaseQRankSum=1.096;DP=344;FS=2.371;HRun=10;HaplotypeScore=53.7714;InbreedingCoeff=0.5493;MQ=69.94;MQ0=0;MQRankSum=1.332;QD=11.46;ReadPosRankSum=2.711;VQSLOD=2.9439;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:45.11:0,45,488	0/0:3,0:3:5.91:0,6,39	0/0:4,0:4:5.85:0,6,47	0/0:15,0:15:20.20:0,20,172	1/1:3,7:10:17.92:148,18,0	0/0:3,0:3:2.96:0,3,19	0/0:18,0:19:21.09:0,21,105	0/0:14,1:15:18.02:0,18,187	1/1:4,13:18:41.02:343,41,0	0/0:9,0:9:11.77:0,12,132	0/1:7,1:8:11.01:11,0,116	0/0:9,1:10:1:0,1,232	0/0:8,0:8:21.06:0,21,232	0/1:11,3:14:25.68:26,0,164	0/0:5,0:8:3.26:0,3,15	0/0:7,0:7:4.88:0,5,20	0/0:5,0:10:8.62:0,9,47	0/0:14,1:15:11.29:0,11,341	1/1:5,7:14:27.09:196,27,0	1/1:1,5:6:11.98:104,12,0	1/1:5,32:39:79.05:663,79,0	0/0:14,0:14:27.07:0,27,298	0/0:11,0:11:21.06:0,21,232	0/1:14,3:17:12.99:13,0,319	0/1:8,2:10:28.06:28,0,165	1/1:6,9:15:26.98:234,27,0	1/1:2,9:11:23.98:208,24,0	1/1:1,7:8:21:182,21,0
chr10	92137128	.	G	GA	4890.14	PASS	AB=0.978;AC=44;AF=0.786;AN=56;BaseQRankSum=-2.146;DP=512;FS=2.819;HRun=10;HaplotypeScore=68.8115;InbreedingCoeff=0.7366;MQ=56.94;MQ0=17;MQRankSum=-1.288;QD=12.10;ReadPosRankSum=0.117;VQSLOD=4.5614;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:25:30.89:0,31,457	0/0:6,0:6:17.98:0,18,148	0/0:17,0:8:20.70:0,21,146	0/1:12,0:5:9.48:9,0,12	1/1:23,0:21:18.21:87,18,0	1/1:7,9:14:31.62:317,32,0	1/1:5,11:12:8.66:123,9,0	1/1:11,18:28:4.94:417,5,0	1/1:17,0:18:35.28:158,35,0	1/1:4,21:24:41.38:597,41,0	1/1:5,5:10:15.04:158,15,0	1/1:4,17:21:28.75:318,29,0	1/1:1,14:14:30.08:320,30,0	1/1:4,16:19:26.80:266,27,0	0/0:22,1:21:17.95:0,18,340	1/1:4,19:22:36.09:384,36,0	0/0:36,0:36:67.26:0,67,667	1/1:3,12:13:14.77:158,15,0	0/1:21,0:21:3.53:36,0,4	1/1:17,0:16:20.52:99,21,0	1/1:4,0:4:4.56:16,5,0	1/1:4,15:19:16.57:348,17,0	1/1:4,21:24:48.12:510,48,0	1/1:2,14:14:17.88:192,18,0	1/1:4,12:16:18.05:192,18,0	1/1:11,0:11:16.78:83,17,0	1/1:14,0:13:5.92:33,6,0	1/1:14,0:12:16.27:70,16,0
chr10	92137137	.	AAG	A	942.86	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=7.746;DP=534;FS=15.340;HRun=0;HaplotypeScore=92.6775;InbreedingCoeff=0.8708;MQ=61.90;MQ0=16;MQRankSum=-3.627;QD=7.31;ReadPosRankSum=-2.432;VQSLOD=1.7057;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:72.96:0,73,1025	0/0:9,0:9:26.98:0,27,331	0/0:21,0:11:21.11:0,21,259	0/0:17,0:10:1.15:0,1,172	1/1:24,1:23:18.94:178,19,0	0/0:18,0:16:38.94:0,39,313	0/0:15,0:10:15.22:0,15,120	0/0:33,0:32:82.97:0,83,842	1/1:19,1:19:16.83:76,17,0	0/0:28,0:27:74.68:0,75,736	0/0:10,0:10:9.06:0,9,136	0/0:21,0:21:38.65:0,39,377	0/0:15,0:14:31.22:0,31,257	0/0:20,0:19:27.21:0,27,218	0/0:20,0:19:56.84:0,57,794	0/0:23,0:22:40.21:0,40,359	0/0:36,0:36:96.29:0,96,1482	0/0:14,0:12:8.55:0,9,60	1/1:17,3:20:49.90:353,50,0	1/1:17,1:17:11.25:114,11,0	0/1:5,0:5:2.48:7,0,2	0/0:20,0:20:37.70:0,38,478	0/0:24,0:23:50.50:0,51,449	0/0:17,0:15:20.84:0,21,184	0/0:14,0:14:19.21:0,19,162	1/1:9,2:11:29.80:189,30,0	1/1:15,1:15:12.47:93,12,0	1/1:14,0:12:21.87:124,22,0
chr10	92137139	.	GA	G	1529.31	PASS	AB=0.964;AC=16;AF=0.286;AN=56;BaseQRankSum=8.742;DP=530;FS=18.968;HRun=10;HaplotypeScore=82.8713;InbreedingCoeff=0.7967;MQ=64.48;MQ0=14;MQRankSum=-4.239;QD=10.06;ReadPosRankSum=-0.571;VQSLOD=0.8443;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:73.08:0,73,956	0/0:10,0:10:27.09:0,27,366	0/0:22,0:12:2.57:0,3,206	0/1:18,0:11:2.40:2,0,243	1/1:21,3:22:42.44:356,42,0	0/0:16,0:14:42.08:0,42,528	0/0:15,0:10:15.04:0,15,188	0/0:32,0:31:87.04:0,87,1116	1/1:20,1:20:24.79:210,25,0	0/0:28,0:27:78.26:0,78,1043	0/0:8,0:8:18.86:0,19,216	0/0:20,0:20:38.98:0,39,511	0/0:15,0:14:33.10:0,33,413	0/0:19,0:18:27.53:0,28,331	0/0:21,0:20:57.17:0,57,747	0/0:23,0:22:45.13:0,45,578	0/0:35,0:35:96.28:0,96,1289	0/0:13,0:11:12.03:0,12,138	1/1:22,0:22:32.66:333,33,0	1/1:14,4:17:40.02:341,40,0	1/1:7,0:7:5.96:44,6,0	0/0:20,0:20:55.72:0,56,703	0/0:23,0:22:54.12:0,54,687	0/0:17,0:15:21.07:0,21,278	0/0:13,0:13:21.06:0,21,270	0/1:12,1:13:9.98:225,0,10	1/1:15,1:15:12.42:102,12,0	1/1:13,0:13:14.66:109,15,0
chr10	92137140	.	A	AAAG	3498.26	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=6.134;DP=541;FS=15.532;HRun=0;HaplotypeScore=98.0931;InbreedingCoeff=0.8726;MQ=65.44;MQ0=14;MQRankSum=-4.476;QD=21.20;ReadPosRankSum=-1.276;VQSLOD=2.2725;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:76.06:0,76,1197	0/0:10,0:10:27.09:0,27,449	0/1:24,0:14:1.94:2,0,310	0/0:18,0:11:23.33:0,23,308	1/1:6,12:22:47.09:584,47,0	0/0:17,0:15:42.11:0,42,627	0/0:15,0:10:14.57:0,15,247	0/0:32,0:31:86.13:0,86,1346	1/1:6,12:20:42.05:783,42,0	0/0:28,0:27:80.94:0,81,1261	0/0:8,0:8:20.93:0,21,285	0/0:20,0:20:38.91:0,39,602	0/0:15,0:14:33.11:0,33,489	0/0:19,0:18:29.90:0,30,411	0/0:22,0:21:57.18:0,57,943	0/0:23,0:22:45.15:0,45,694	0/0:35,0:35:96.30:0,96,1604	0/0:13,0:11:12.92:0,13,171	1/1:12,11:25:33.15:458,33,0	1/1:8,9:18:40.77:579,41,0	1/1:1,7:8:6.02:118,6,0	0/0:20,0:20:57.17:0,57,871	0/0:23,0:22:54.18:0,54,852	0/0:17,0:15:20.85:0,21,331	0/0:13,0:13:21.07:0,21,333	1/1:6,2:14:0.60:416,1,0	1/1:5,8:16:14.90:241,15,0	1/1:3,8:13:14.55:317,15,0
chr10	92139354	.	A	AG	10711.33	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-17.298;DP=783;FS=5.156;HRun=1;HaplotypeScore=89.6763;InbreedingCoeff=0.9999;MQ=78.62;MQ0=0;MQRankSum=-2.169;QD=38.67;ReadPosRankSum=3.456;VQSLOD=5.4380;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,1825	0/0:14,0:14:42.14:0,42,545	0/0:22,0:22:57.18:0,57,738	0/0:15,0:15:42.11:0,42,510	0/0:30,0:30:81.25:0,81,1034	0/0:17,0:17:47.63:0,48,622	0/0:28,0:28:81.24:0,81,1023	0/0:37,0:37:99:0,105,1360	0/0:34,0:34:96.31:0,96,1246	1/1:3,33:36:99:1452,99,0	1/1:0,22:22:60.20:899,60,0	1/1:1,29:30:84.28:1248,84,0	1/1:2,24:26:65.96:959,66,0	1/1:0,27:27:72.24:1077,72,0	0/0:41,0:41:99:0,120,1542	0/0:29,0:29:84.27:0,84,1088	0/0:28,0:28:81.25:0,81,1038	1/1:0,31:31:69.23:1034,69,0	0/0:22,0:22:66.21:0,66,839	0/0:29,0:29:84.26:0,84,1073	0/0:44,0:44:99:0,129,1659	1/1:1,29:30:75.25:1124,75,0	1/1:0,23:23:60.20:895,60,0	1/1:1,29:30:84.28:1259,84,0	1/1:2,20:22:51.17:765,51,0	0/0:27,1:28:36.36:0,36,942	0/0:27,0:26:81.26:0,81,1052	0/0:11,0:11:30.10:0,30,390
chr10	92139501	.	C	CCAA	34388.17	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-6.622;DP=757;FS=0.856;HRun=0;HaplotypeScore=104.5928;InbreedingCoeff=0.9963;MQ=92.29;MQ0=0;MQRankSum=-10.743;QD=53.23;ReadPosRankSum=6.118;VQSLOD=7.1402;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,99,1597	1/1:0,6:6:18.06:407,18,0	0/0:35,0:35:93.25:0,93,1423	0/0:36,0:36:89.95:0,90,1243	1/1:3,11:15:27.09:551,27,0	1/1:1,16:17:48.16:1057,48,0	1/1:5,27:33:78.27:1766,78,0	1/1:0,24:27:81.17:1461,81,0	1/1:2,22:24:66.23:1494,66,0	1/1:3,34:37:99:2235,105,0	1/1:2,18:21:51.02:1055,51,0	1/1:5,37:42:99:2258,102,0	1/1:1,28:30:75.26:1693,75,0	1/1:2,25:28:66.22:1459,66,0	1/1:0,36:37:99:2178,99,0	1/1:1,40:41:93.32:2076,93,0	1/1:2,21:24:54.19:1222,54,0	1/1:0,15:16:42.14:952,42,0	1/1:5,18:24:66.14:1242,66,0	1/1:1,18:19:54.14:1053,54,0	1/1:7,50:59:99:2451,135,0	1/1:4,18:22:57.15:1212,57,0	1/1:0,14:15:36.05:735,36,0	1/1:4,20:24:38.90:883,39,0	1/1:0,16:16:39.13:883,39,0	1/1:3,26:31:90.27:1898,90,0	1/1:3,23:28:69.05:1555,69,0	1/1:0,10:10:27.09:611,27,0
chr10	92140927	.	G	GGCC	4066.78	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=0.401;DP=384;FS=10.654;HRun=0;HaplotypeScore=60.1065;InbreedingCoeff=0.9341;MQ=71.47;MQ0=2;MQRankSum=-0.812;QD=24.50;ReadPosRankSum=-2.103;VQSLOD=2.0279;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:36.03:0,36,470	0/0:8,0:8:24:0,24,307	0/0:17,0:13:36.58:0,37,523	0/0:15,0:13:20.87:0,21,246	1/1:10,0:10:24.08:374,24,0	1/1:2,10:12:3.90:57,4,0	1/1:13,0:12:33.09:449,33,0	1/1:7,0:16:30.10:398,30,0	1/1:14,0:13:36.07:510,36,0	0/0:16,0:16:47.74:0,48,670	0/0:11,0:11:24.08:0,24,356	0/0:17,0:17:47.99:0,48,622	0/0:15,0:15:39.05:0,39,492	0/0:14,0:14:39.08:0,39,488	0/0:7,0:7:15.05:0,15,207	1/1:3,17:20:3.01:65,3,0	0/0:33,0:32:78.20:0,78,1073	0/0:13,0:13:39.10:0,39,562	1/1:4,7:11:24.02:348,24,0	1/1:2,11:13:27.06:345,27,0	1/1:14,0:14:31.64:495,32,0	0/0:8,0:8:21.07:0,21,309	0/0:8,0:8:21.06:0,21,297	0/0:13,0:13:39.12:0,39,549	0/0:9,0:9:21.81:0,22,270	1/1:1,7:8:21.06:340,21,0	1/1:15,0:15:39.12:563,39,0	1/1:4,15:19:6.49:122,6,0
chr10	92140991	.	TTC	T	282.51	PASS	AB=0.863;AC=14;AF=0.280;AN=50;BaseQRankSum=1.507;DP=160;FS=2.331;HRun=0;HaplotypeScore=66.5408;InbreedingCoeff=-0.2906;MQ=36.37;MQ0=15;MQRankSum=-2.621;QD=3.10;ReadPosRankSum=3.360;VQSLOD=1.7325;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:14.88:0,15,177	0/1:4,1:5:29.17:29,0,149	./.	./.	0/0:0,2:2:1.77:0,2,4	0/1:4,1:5:29.23:29,0,145	0/1:6,4:8:18.01:78,0,18	./.	0/1:9,1:9:17.91:18,0,214	0/1:7,1:7:43.09:43,0,245	0/0:4,0:4:10.57:0,11,99	0/0:3,0:3:9.03:0,9,169	0/1:10,1:11:14.48:14,0,261	0/1:7,0:7:10.26:10,0,149	0/1:3,1:3:25.33:25,0,36	0/1:5,3:8:99:102,0,178	0/0:8,0:8:15.01:0,15,206	1/1:2,0:1:1.55:4,2,0	0/0:5,0:2:6.02:0,6,112	0/1:6,1:7:21.82:22,0,231	0/0:8,0:8:18.04:0,18,232	0/0:4,0:3:6.49:0,6,95	0/0:4,0:3:7.27:0,7,111	0/0:7,0:7:14.73:0,15,157	0/1:8,0:8:19.42:19,0,225	0/1:5,1:5:26.21:26,0,211	0/0:4,0:4:6.87:0,7,166	0/0:6,0:5:15.05:0,15,278
chr10	92141006	.	CG	C	194.28	PASS	AB=1.000;AC=15;AF=0.833;AN=18;BaseQRankSum=1.240;DP=25;FS=0.000;HRun=1;HaplotypeScore=71.0423;MQ=28.99;MQ0=2;MQRankSum=-0.248;QD=10.79;ReadPosRankSum=-0.992;VQSLOD=1.0393;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:6.45:48,6,0	./.	./.	./.	./.	./.	1/1:1,0:1:2.98:22,3,0	./.	./.	./.	1/1:0,1:1:2.99:24,3,0	./.	1/1:0,4:4:11.93:93,12,0	1/1:1,1:2:2.37:8,2,0	./.	./.	./.	./.	./.	./.	0/1:2,0:2:0.02:0,0,0	1/1:0,1:1:2.99:24,3,0	./.	0/0:2,1:3:2.36:0,2,8	1/1:2,2:4:7.22:49,7,0	./.	./.	./.
chr10	92141050	.	T	TC	196.87	PASS	AB=1.000;AC=12;AF=0.400;AN=30;BaseQRankSum=-1.110;DP=45;FS=3.023;HRun=6;HaplotypeScore=42.3568;InbreedingCoeff=0.3049;MQ=59.92;MQ0=1;MQRankSum=0.716;QD=10.94;ReadPosRankSum=1.604;VQSLOD=0.6801;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:4:8.41:8,0,30	./.	0/0:3,0:1:2.68:0,3,11	0/0:2,0:1:2.99:0,3,24	./.	./.	1/1:0,2:2:6.02:74,6,0	1/1:0,3:3:9.03:113,9,0	./.	0/0:2,0:2:0.83:0,1,16	0/0:3,0:3:5.93:0,6,39	./.	0/1:5,0:5:0.10:0,0,47	0/0:3,0:3:2.97:0,3,20	1/1:1,0:1:3.01:34,3,0	./.	./.	0/0:1,0:1:2.96:0,3,19	./.	./.	1/1:1,1:2:3.01:38,3,0	0/0:2,0:2:5.93:0,6,40	./.	./.	0/0:3,0:3:5.93:0,6,39	./.	1/1:0,1:1:3.01:38,3,0	./.
chr10	92142319	.	TTA	T	6991.82	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.172;DP=630;FS=5.250;HRun=0;HaplotypeScore=90.6937;InbreedingCoeff=0.9971;MQ=88.10;MQ0=0;MQRankSum=-3.114;QD=43.97;ReadPosRankSum=2.784;VQSLOD=6.6544;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1948	0/0:9,0:8:27.09:0,27,538	0/0:30,0:30:72.99:0,73,1318	0/0:27,0:26:61.34:0,61,1246	1/1:0,25:25:66.18:1046,66,0	0/0:21,0:21:57.17:0,57,1067	0/0:29,0:29:87.30:0,87,1764	0/0:33,0:33:96.32:0,96,1860	1/1:0,23:23:66.23:1075,66,0	0/0:29,0:29:87.28:0,87,1662	0/0:12,0:12:36.12:0,36,731	0/0:22,0:22:66.19:0,66,1233	0/0:15,0:15:45.15:0,45,895	0/0:22,0:22:63.21:0,63,1245	0/0:20,0:20:60.21:0,60,1219	0/0:21,0:20:63.20:0,63,1204	0/0:36,0:36:99:0,108,2121	0/0:30,0:30:90.24:0,90,1699	1/1:0,20:20:60.16:917,60,0	1/1:0,21:21:57.19:929,57,0	1/1:0,18:18:48.16:783,48,0	0/0:23,0:23:69.22:0,69,1285	0/0:16,0:16:48.16:0,48,974	0/0:26,0:26:78.27:0,78,1584	0/0:17,0:17:48.16:0,48,973	1/1:0,18:18:54.14:824,54,0	1/1:0,27:27:72.25:1174,72,0	1/1:0,7:7:15.05:244,15,0
chr10	92142625	.	ATGTG	A	1545.71	PASS	AC=32;AF=0.727;AN=44;BaseQRankSum=3.278;DP=490;FS=8.244;HRun=0;HaplotypeScore=112.1008;InbreedingCoeff=0.6736;MQ=67.44;MQ0=13;MQRankSum=-3.365;QD=6.81;ReadPosRankSum=2.605;VQSLOD=1.9463;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:33.56:0,34,649	1/1:4,1:5:3.01:46,3,0	./.	./.	1/1:9,0:16:11.91:100,12,0	0/0:12,0:15:12.04:0,12,221	0/0:28,0:29:12.45:0,12,263	./.	1/1:9,0:11:9.01:84,9,0	1/1:13,6:20:6:74,6,0	1/1:5,0:6:3:28,3,0	1/1:11,0:12:3:28,3,0	1/1:5,3:8:6.48:75,6,0	1/1:15,7:23:20.74:285,21,0	1/1:11,6:17:11.75:183,12,0	0/0:11,0:14:6.01:0,6,122	1/1:28,1:28:6:69,6,0	1/1:15,5:19:15.05:230,15,0	./.	1/1:10,0:11:3:28,3,0	./.	./.	0/0:9,0:12:11.44:0,11,67	0/0:18,0:22:5.49:0,5,24	1/1:6,4:10:9.03:138,9,0	1/1:10,0:13:9.01:84,9,0	1/1:6,0:12:12.01:112,12,0	1/1:4,0:10:15.02:140,15,0
chr10	92142809	.	G	GA	1062.41	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-7.269;DP=471;FS=2.982;HRun=9;HaplotypeScore=44.4293;InbreedingCoeff=0.7992;MQ=63.35;MQ0=6;MQRankSum=-0.629;QD=16.34;ReadPosRankSum=-0.021;VQSLOD=3.3552;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:83.96:0,84,729	0/0:7,0:7:18:0,18,156	0/1:15,0:11:15.82:16,0,73	0/0:14,0:6:6.04:0,6,109	0/0:16,0:16:44.99:0,45,391	1/1:1,9:10:27.07:299,27,0	1/1:5,16:20:39.11:431,39,0	0/0:26,0:25:56.94:0,57,490	0/0:16,0:16:38.96:0,39,335	0/0:16,0:16:44.95:0,45,384	0/0:7,0:7:21:0,21,182	0/0:14,0:14:35.98:0,36,313	0/0:6,0:6:14.99:0,15,130	0/0:17,0:17:41.99:0,42,365	0/0:15,0:15:35.98:0,36,312	1/1:2,17:18:42.11:465,42,0	0/0:31,0:29:71.96:0,72,622	0/0:19,0:18:41.99:0,42,365	0/0:25,0:24:62.98:0,63,547	0/0:10,0:10:26.99:0,27,234	0/0:10,0:10:23.98:0,24,208	0/0:8,0:8:14.99:0,15,130	0/0:13,0:13:32.98:0,33,286	0/0:28,0:28:74.98:0,75,651	0/0:19,0:19:53.99:0,54,467	0/0:21,0:21:62.98:0,63,544	0/0:18,0:17:49.81:0,50,421	0/0:10,0:11:29.03:0,29,240
chr10	92144672	.	CAGCTTTTCTGGA	C	15104.51	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=17.512;DP=621;FS=3.540;HRun=0;HaplotypeScore=221.1118;InbreedingCoeff=0.9901;MQ=87.02;MQ0=0;MQRankSum=-15.934;QD=78.67;ReadPosRankSum=3.907;VQSLOD=4.3574;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,160,9432	0/0:11,0:11:33.11:0,33,2045	0/0:31,0:31:90.31:0,90,4911	0/0:18,0:18:54.05:0,54,2784	0/0:25,0:25:69.24:0,69,4110	0/0:22,0:22:66.21:0,66,3582	0/0:31,0:31:90.31:0,90,5397	0/0:22,0:22:60.20:0,60,3559	0/0:19,0:19:57.18:0,57,3332	1/1:3,28:31:81.17:2560,81,0	1/1:0,12:12:30.10:1139,30,0	1/1:1,28:29:63.09:2393,63,0	1/1:1,17:18:39.11:1389,39,0	1/1:2,21:23:51.18:1937,51,0	0/0:20,0:20:57.17:0,57,3114	0/0:20,0:20:60.21:0,60,3568	0/0:33,0:33:96.33:0,96,5648	1/1:0,11:11:21.07:672,21,0	0/0:19,0:19:51.18:0,51,3088	0/0:17,0:17:51.18:0,51,3014	0/0:35,0:35:99:0,99,5657	1/1:1,17:18:39.13:1481,39,0	1/1:0,21:21:56.73:1746,57,0	1/1:0,15:15:21.90:704,22,0	1/1:1,13:14:35.99:1082,36,0	0/0:27,0:27:78.27:0,78,4791	0/0:23,0:23:66.23:0,66,3720	0/0:3,0:3:9.03:0,9,506
chr10	92144839	.	TTGGGAAGTACCACTCA	T	13483.97	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.916;DP=603;FS=0.000;HRun=0;HaplotypeScore=266.1832;InbreedingCoeff=0.9660;MQ=94.19;MQ0=0;MQRankSum=-12.195;QD=84.80;ReadPosRankSum=3.217;VQSLOD=3.6755;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,10009	0/0:9,0:8:24.08:0,24,1678	0/0:30,0:30:75.20:0,75,3569	0/0:33,0:33:81.28:0,81,4861	1/1:0,8:8:18.02:675,18,0	1/1:3,15:18:39.13:1830,39,0	1/1:5,8:13:21.07:985,21,0	0/0:23,0:23:66.23:0,66,4507	1/1:2,15:17:39.13:1823,39,0	0/0:31,0:30:93.30:0,93,6380	0/0:10,0:10:24.08:0,24,1593	0/0:45,0:45:99:0,129,8838	0/0:25,0:25:75.24:0,75,5279	0/0:28,0:28:84.29:0,84,6348	0/0:18,0:18:54.19:0,54,3827	1/1:0,14:14:39.13:1830,39,0	0/0:30,0:30:84.27:0,84,6028	0/0:15,0:15:42.14:0,42,2935	1/1:7,8:15:24.08:1075,24,0	1/1:2,6:8:15.05:638,15,0	1/1:10,11:21:6.46:282,6,0	0/0:28,0:28:81.27:0,81,5757	0/0:19,0:19:57.20:0,57,3939	0/0:33,0:33:93.32:0,93,7027	0/0:20,0:20:48.16:0,48,3557	1/1:3,20:23:60.19:2389,60,0	1/1:1,18:19:36.12:1676,36,0	1/1:0,3:3:6.02:282,6,0
chr10	92145207	.	GACCCACTCCC	G	302.20	PASS	AC=6;AF=0.231;AN=26;BaseQRankSum=2.434;DP=401;FS=6.166;HRun=0;HaplotypeScore=19.4339;InbreedingCoeff=0.3342;MQ=13.41;MQ0=242;MQRankSum=-2.208;QD=6.43;ReadPosRankSum=1.868;VQSLOD=-0.4194;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:9:8.99:0,9,140	./.	./.	./.	./.	./.	0/0:7,0:1:3.01:0,3,56	1/1:5,1:1:3.01:98,3,0	./.	./.	0/0:11,0:2:3.01:0,3,57	0/0:26,0:4:3.01:0,3,93	./.	0/0:28,0:2:4.26:0,4,92	./.	0/0:15,0:5:4.25:0,4,37	1/1:12,2:5:6.02:197,6,0	1/1:26,1:4:2.95:99,3,0	0/0:8,1:1:3.01:0,3,63	./.	0/0:14,0:1:0:0,0,0	0/0:31,0:1:3.01:0,3,39	./.	0/0:68,1:5:2.94:0,3,18	./.	./.	./.	./.
chr10	92145687	.	CACCTGTTCAG	C	676.15	PASS	AC=4;AF=0.095;AN=42;BaseQRankSum=4.117;DP=496;FS=9.401;HRun=0;HaplotypeScore=122.1002;InbreedingCoeff=0.5074;MQ=61.99;MQ0=36;MQRankSum=-2.228;QD=16.10;ReadPosRankSum=-1.621;VQSLOD=1.3223;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:79.29:0,79,3356	./.	0/0:38,0:24:37.35:0,37,908	0/0:33,0:18:30.10:0,30,759	0/0:7,0:6:15.05:0,15,590	./.	./.	1/1:15,14:28:17.97:640,18,0	0/0:24,0:16:39.12:0,39,1232	1/1:10,3:8:6.02:140,6,0	./.	0/0:10,0:7:3.01:0,3,90	0/0:7,0:5:3.01:0,3,105	0/0:12,0:5:3.01:0,3,67	./.	0/0:3,0:3:3.01:0,3,99	0/0:26,0:18:3.01:0,3,101	0/0:17,0:7:6.02:0,6,154	0/0:21,0:20:39.13:0,39,1154	0/0:11,0:11:30.10:0,30,1155	0/0:86,0:75:99:0,193,7576	0/0:8,0:6:3.01:0,3,73	./.	0/0:29,0:23:15.50:0,16,541	./.	0/0:18,0:16:16.20:0,16,1408	0/0:14,0:10:12.04:0,12,523	0/0:5,0:5:15.05:0,15,571
chr10	92145857	.	G	GACCCACTCCC	6665.79	PASS	AB=0.895;AC=23;AF=0.411;AN=56;BaseQRankSum=10.939;DP=747;FS=23.118;HRun=0;HaplotypeScore=228.0634;InbreedingCoeff=-0.1681;MQ=46.99;MQ0=79;MQRankSum=-12.623;QD=16.83;ReadPosRankSum=-5.468;VQSLOD=1.4935;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:50:99:0,144,4609	1/1:3,0:3:3.01:93,3,0	0/1:35,0:11:22.26:22,0,529	0/0:38,0:10:21.07:0,21,471	0/0:33,0:32:72.24:0,72,2030	1/1:2,0:2:6.02:183,6,0	1/1:3,0:3:9:155,9,0	0/1:27,0:16:99:178,0,774	0/0:43,1:37:99:0,102,3225	0/1:45,0:43:99:1765,0,1159	0/0:10,0:6:15.05:0,15,415	0/1:21,0:17:99:514,0,675	0/1:17,2:17:99:756,0,426	0/1:10,6:15:99:330,0,503	0/1:17,1:18:99:813,0,447	1/1:7,0:7:18.06:508,18,0	0/1:23,1:24:99:340,0,883	0/1:16,1:16:99:211,0,980	0/1:29,1:15:99:126,0,848	0/0:35,0:32:84.24:0,84,2241	0/0:91,0:89:99:0,248,7474	0/1:6,3:11:99:112,0,373	0/1:10,5:13:99:231,0,326	0/1:24,5:27:99:197,0,1258	0/1:11,0:9:74.63:75,0,299	0/1:49,0:44:57.72:58,0,3293	0/0:29,0:23:54.19:0,54,1778	0/0:18,0:18:51.18:0,51,1563
chr10	92146177	.	ACGGGG	A	3944.91	PASS	AB=0.769;AC=11;AF=0.196;AN=56;BaseQRankSum=12.143;DP=601;FS=14.638;HRun=0;HaplotypeScore=170.4226;InbreedingCoeff=0.1875;MQ=67.06;MQ0=0;MQRankSum=-12.817;QD=24.05;ReadPosRankSum=-2.092;VQSLOD=2.2939;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,172,5277	0/0:10,0:10:30.10:0,30,958	0/0:23,0:23:69.23:0,69,2071	0/0:20,0:19:54.14:0,54,1566	0/1:12,6:18:99:315,0,169	0/0:19,0:19:57.03:0,57,1754	0/0:33,0:33:96.33:0,96,3074	1/1:15,13:28:26.83:1127,27,0	0/1:12,7:19:47.51:333,0,48	0/0:27,0:27:81.26:0,81,2427	0/0:12,0:12:36.12:0,36,1154	0/0:17,0:16:48.15:0,48,1420	0/0:14,0:14:42.13:0,42,1278	0/0:16,0:16:45.15:0,45,1284	0/0:20,0:20:60.21:0,60,1928	0/0:15,0:15:37.02:0,37,1259	0/0:48,0:48:99:0,138,4328	0/0:34,0:34:99:0,99,3061	0/1:7,13:20:36.13:553,0,36	0/1:12,5:17:84.58:423,0,85	1/1:5,4:9:8.69:300,9,0	0/0:13,0:13:39.13:0,39,1247	0/0:20,0:20:48.16:0,48,1541	0/0:25,0:25:72.19:0,72,2089	0/0:14,0:14:39.13:0,39,1201	0/1:24,8:32:99:604,0,408	0/1:14,2:16:99:215,0,193	0/1:4,1:5:70.73:75,0,71
chr10	92146178	.	C	CA	2132.08	PASS	AB=0.694;AC=17;AF=0.304;AN=56;BaseQRankSum=14.647;DP=601;FS=32.849;HRun=1;HaplotypeScore=132.5713;InbreedingCoeff=0.8881;MQ=67.39;MQ0=0;MQRankSum=-12.281;QD=13.33;ReadPosRankSum=1.145;VQSLOD=1.1393;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,171,2265	0/0:11,0:11:30.10:0,30,414	0/0:23,0:23:68.88:0,69,899	0/0:21,0:20:54.13:0,54,689	1/1:8,11:19:27.82:243,28,0	0/0:19,0:19:57.02:0,57,762	0/0:32,0:32:96.31:0,96,1320	0/1:14,11:25:5.93:187,0,6	1/1:7,11:18:29.04:290,29,0	0/0:28,0:28:78.23:0,78,1047	0/0:12,0:12:36.12:0,36,501	0/0:17,0:16:45:0,45,611	0/0:14,0:14:42.12:0,42,560	0/0:17,0:17:35.67:0,36,498	0/0:20,0:20:60.20:0,60,831	0/0:14,1:15:15.18:0,15,489	0/0:48,0:48:99:0,141,1910	0/0:34,0:34:99:0,99,1307	1/1:15,5:20:28.58:254,29,0	1/1:5,11:16:21.49:248,21,0	1/1:8,2:10:3.93:65,4,0	0/0:13,0:13:39.13:0,39,542	0/0:20,0:20:48.16:0,48,667	0/0:25,0:25:72.13:0,72,928	0/0:14,0:14:39.10:0,39,520	1/1:9,23:32:24.50:634,24,0	1/1:2,13:15:34.46:339,34,0	1/1:2,3:5:6.52:72,7,0
chr10	92146179	.	G	GAAGGATT	9737.02	PASS	AB=0.938;AC=19;AF=0.339;AN=56;BaseQRankSum=18.256;DP=639;FS=51.853;HRun=0;HaplotypeScore=214.7936;InbreedingCoeff=0.8996;MQ=65.93;MQ0=0;MQRankSum=-17.177;QD=45.50;ReadPosRankSum=-1.323;VQSLOD=2.7353;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,172,4564	0/0:11,0:11:33.10:0,33,820	0/0:23,0:23:69.23:0,69,1825	0/0:22,0:21:57.04:0,57,1367	1/1:13,3:24:44.85:634,45,0	0/0:19,0:19:57.15:0,57,1528	0/0:32,0:32:96.33:0,96,2604	1/1:23,7:34:96.44:1651,96,0	1/1:7,8:18:42.92:1082,43,0	0/0:28,0:28:81.23:0,81,2095	0/0:12,0:12:36.12:0,36,1003	0/0:16,0:15:45.11:0,45,1195	0/0:14,0:14:39.13:0,39,1082	0/0:18,0:18:45.06:0,45,1069	0/0:20,0:20:60.21:0,60,1576	0/1:14,1:15:59.47:59,0,1021	0/0:49,0:49:99:0,135,3695	0/0:34,0:34:99:0,99,2648	1/1:22,3:27:5.05:894,5,0	1/1:10,5:21:56.35:1160,56,0	1/1:9,2:11:27.04:583,27,0	0/0:13,0:13:39.13:0,39,1072	0/0:18,0:18:48.16:0,48,1340	0/0:24,0:24:72.22:0,72,1813	0/0:14,0:14:39.13:0,39,1043	1/1:16,12:39:26.12:2203,26,0	1/1:4,5:17:50.76:1137,51,0	1/1:5,0:8:21.07:332,21,0
chr10	92146192	.	TG	T	1938.17	PASS	AB=0.718;AC=9;AF=0.161;AN=56;BaseQRankSum=8.906;DP=611;FS=25.088;HRun=4;HaplotypeScore=143.2579;InbreedingCoeff=-0.1897;MQ=66.16;MQ0=0;MQRankSum=-11.395;QD=9.79;ReadPosRankSum=-1.027;VQSLOD=0.1075;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,157,2163	0/0:11,0:11:27.09:0,27,377	0/0:22,0:22:60.20:0,60,818	0/0:14,0:14:39.09:0,39,523	0/1:19,5:24:2.50:2,0,420	0/0:18,0:18:48.16:0,48,671	0/0:31,0:31:81.27:0,81,1133	0/1:21,14:35:99:413,0,410	0/1:6,10:16:99:282,0,126	0/0:30,0:30:90.30:0,90,1259	0/0:11,0:11:33.11:0,33,456	0/0:19,0:18:51.17:0,51,708	0/0:13,0:13:39.13:0,39,542	0/0:19,0:19:51.17:0,51,714	0/0:22,0:22:60.20:0,60,840	0/0:12,1:13:3.32:0,3,468	0/0:45,0:45:99:0,126,1761	0/0:32,0:32:87.29:0,87,1217	0/1:15,11:26:99:293,0,436	0/1:14,9:23:99:217,0,485	0/1:2,7:9:59.83:190,0,60	0/0:12,0:12:33.11:0,33,461	0/0:17,0:17:42.14:0,42,587	0/0:17,0:17:48.15:0,48,655	0/0:13,0:13:30.10:0,30,409	0/1:23,16:39:99:460,0,762	0/1:11,7:18:99:202,0,346	0/1:7,1:8:14.89:15,0,230
chr10	92146243	.	CT	C	1345.92	PASS	AB=0.667;AC=15;AF=0.268;AN=56;BaseQRankSum=4.512;DP=362;FS=22.202;HRun=4;HaplotypeScore=82.3370;InbreedingCoeff=0.8345;MQ=64.03;MQ0=7;MQRankSum=-5.316;QD=20.71;ReadPosRankSum=0.925;VQSLOD=2.1510;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1502	0/0:14,0:14:39.13:0,39,537	0/0:15,0:9:14.73:0,15,166	0/0:24,0:10:20.25:0,20,202	1/1:3,9:12:31.34:354,31,0	0/0:13,0:12:33.09:0,33,442	0/0:13,0:13:27.05:0,27,355	0/0:15,0:15:36.01:0,36,418	1/1:0,2:2:6.02:69,6,0	0/0:23,0:23:66.14:0,66,840	0/0:3,0:3:9.03:0,9,119	0/0:13,0:13:36.12:0,36,489	0/0:8,0:6:18.06:0,18,248	0/0:14,0:14:35.76:0,36,428	0/0:19,0:18:51.17:0,51,712	0/0:13,0:12:33.04:0,33,401	0/0:24,0:24:63.20:0,63,855	0/0:18,0:18:45.11:0,45,592	0/1:5,5:9:6.31:155,0,6	1/1:4,9:13:27.08:315,27,0	1/1:0,2:2:3.01:36,3,0	0/0:4,0:3:9.03:0,9,123	0/0:7,0:6:18.05:0,18,225	0/0:11,0:11:29.66:0,30,362	0/0:9,0:9:18.53:0,19,240	1/1:4,9:13:27.08:318,27,0	1/1:1,3:4:9.03:104,9,0	1/1:3,6:8:15.01:180,15,0
chr10	92146258	.	C	CT	2838.03	PASS	AB=0.821;AC=33;AF=0.611;AN=54;BaseQRankSum=8.053;DP=346;FS=1.772;HRun=4;HaplotypeScore=80.5033;InbreedingCoeff=0.6267;MQ=53.13;MQ0=14;MQRankSum=-6.982;QD=16.13;ReadPosRankSum=-3.378;VQSLOD=2.6863;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,1148	0/0:14,0:14:42.11:0,42,461	0/0:17,0:6:5.75:0,6,46	0/0:36,0:10:10.27:0,10,104	1/1:7,4:11:22.92:240,23,0	0/0:12,0:11:24.95:0,25,268	0/1:12,0:12:7.82:8,0,209	0/1:6,0:6:18.30:18,0,28	./.	1/1:6,17:22:51.90:603,52,0	1/1:5,1:5:5.80:43,6,0	1/1:4,9:12:33.01:338,33,0	1/1:3,5:5:13.58:89,14,0	1/1:1,8:9:21.04:232,21,0	0/0:18,0:17:45.13:0,45,510	0/0:12,0:11:23.96:0,24,262	0/0:20,0:19:42.06:0,42,454	1/1:10,5:15:29.74:299,30,0	0/1:5,3:6:3.98:62,0,4	1/1:7,0:7:14.37:127,14,0	0/1:0,1:1:0:0,0,0	1/1:2,2:3:6.01:67,6,0	1/1:2,4:5:11.75:99,12,0	1/1:4,5:9:15.04:183,15,0	1/1:7,7:14:11.24:216,11,0	1/1:4,4:8:18.04:191,18,0	0/1:5,1:5:9.31:38,0,9	1/1:4,5:7:14.78:177,15,0
chr10	92146259	.	TTTTCTTTTC	T	3853.88	PASS	AB=0.989;AC=31;AF=0.574;AN=54;BaseQRankSum=0.974;DP=349;FS=1.083;HRun=0;HaplotypeScore=116.0249;InbreedingCoeff=0.0649;MQ=52.56;MQ0=14;MQRankSum=-5.423;QD=18.44;ReadPosRankSum=-7.092;VQSLOD=0.1886;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,107,4169	0/0:14,0:14:1.44:0,1,1365	0/0:18,0:6:5.35:0,5,84	0/0:38,0:10:12.42:0,12,224	1/1:8,3:11:27.03:453,27,0	0/1:12,0:11:54.21:54,0,620	0/1:12,0:12:32.52:33,0,581	1/1:6,0:6:10.28:149,10,0	./.	0/1:22,0:21:60.36:426,0,60	1/1:7,0:6:8.96:86,9,0	0/1:13,0:12:69.89:138,0,70	0/1:8,0:5:10.18:70,0,10	0/1:9,0:9:54.50:203,0,54	0/0:18,0:17:7.54:0,8,1635	0/0:11,0:10:27.09:0,27,817	0/1:19,0:18:78.57:79,0,952	1/1:14,0:15:14.53:297,15,0	1/1:8,0:5:10.85:191,11,0	1/1:3,4:7:14.98:368,15,0	1/1:1,0:1:3.01:41,3,0	0/1:5,0:4:16.53:58,0,17	1/1:6,0:5:10.58:172,11,0	0/1:9,0:9:10.33:78,0,10	0/1:14,0:14:65.09:132,0,65	1/1:7,2:9:17.68:392,18,0	0/1:6,1:5:7.36:153,0,7	1/1:9,0:7:18.03:284,18,0
chr10	92146264	.	TTTTC	T	4303.38	PASS	AB=1.000;AC=40;AF=0.741;AN=54;BaseQRankSum=6.077;DP=348;FS=12.521;HRun=0;HaplotypeScore=87.0335;InbreedingCoeff=0.2685;MQ=44.10;MQ0=13;MQRankSum=-7.124;QD=17.93;ReadPosRankSum=-5.595;VQSLOD=2.0117;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,105,2388	0/0:14,0:14:1.44:0,1,707	0/0:18,0:5:5.78:0,6,87	0/0:36,0:7:9.47:0,9,143	1/1:10,2:12:24.28:280,24,0	0/1:14,0:12:94.85:95,0,306	0/1:12,0:12:66.24:66,0,291	1/1:2,1:3:9.03:130,9,0	./.	1/1:10,13:22:43.50:691,44,0	1/1:6,0:5:11.95:110,12,0	1/1:5,7:11:18.45:314,18,0	1/1:7,2:6:18.04:205,18,0	1/1:8,3:11:12.88:193,13,0	0/1:20,0:19:55.75:56,0,915	0/1:12,0:11:23.44:23,0,316	0/1:20,0:19:99:114,0,543	1/1:10,3:13:26.66:304,27,0	1/1:7,0:4:10.85:134,11,0	1/1:7,0:7:14.98:228,15,0	1/1:0,1:1:3.01:41,3,0	1/1:5,1:5:4.07:104,4,0	1/1:5,2:6:15.02:168,15,0	1/1:5,2:7:15.12:143,15,0	1/1:10,4:14:39.02:425,39,0	1/1:7,2:9:19.81:273,20,0	0/1:6,0:4:7.36:81,0,7	1/1:8,1:7:13.54:127,14,0
chr10	92146268	.	C	CT	3079.67	PASS	AB=0.807;AC=41;AF=0.759;AN=54;BaseQRankSum=8.250;DP=341;FS=21.364;HRun=4;HaplotypeScore=82.8376;InbreedingCoeff=0.1700;MQ=41.81;MQ0=13;MQRankSum=-7.840;QD=12.22;ReadPosRankSum=-4.163;VQSLOD=0.2864;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,99,1119	0/1:11,3:14:80.73:81,0,282	0/0:16,0:5:6.01:0,6,64	0/0:34,0:6:4.28:0,4,51	1/1:11,0:11:17.60:121,18,0	0/1:11,4:13:95.02:101,0,95	0/1:8,3:11:74.03:74,0,120	1/1:2,2:4:8.86:96,9,0	./.	1/1:14,6:20:47.73:492,48,0	1/1:4,5:7:11.97:112,12,0	1/1:9,3:11:23.23:188,23,0	1/1:2,7:6:17.90:153,18,0	1/1:8,3:11:17.43:106,17,0	0/1:17,3:19:56.07:56,0,409	0/1:6,5:10:80.14:138,0,80	0/1:16,4:19:99:127,0,229	1/1:5,5:11:27.03:269,27,0	1/1:6,1:5:10.76:83,11,0	1/1:7,0:7:14.72:91,15,0	1/1:1,0:1:3.01:41,3,0	1/1:4,3:6:6.94:112,7,0	1/1:6,3:8:14.67:121,15,0	1/1:2,4:6:14.47:113,14,0	1/1:6,9:15:39.04:405,39,0	1/1:8,1:9:16.84:108,17,0	0/1:5,1:4:8.38:18,0,8	1/1:6,0:5:8.25:36,8,0
chr10	92146272	.	TC	T	839.27	PASS	AB=0.977;AC=26;AF=0.481;AN=54;BaseQRankSum=3.080;DP=334;FS=6.581;HRun=1;HaplotypeScore=82.5174;InbreedingCoeff=-0.3423;MQ=41.45;MQ0=12;MQRankSum=-6.072;QD=3.57;ReadPosRankSum=0.754;VQSLOD=0.1539;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:97.69:0,98,1403	0/1:14,0:14:19.21:103,0,19	0/0:16,0:5:5.95:0,6,54	0/0:29,1:6:4.69:0,5,42	1/1:9,1:10:20.26:116,20,0	0/1:14,0:12:23.69:60,0,24	0/1:11,0:11:27.25:53,0,27	0/1:5,0:5:11.95:12,0,15	./.	0/1:21,0:20:15.90:16,0,123	0/1:10,0:8:19.98:26,0,20	0/0:11,0:10:16.88:0,17,82	0/1:10,0:7:32.40:33,0,32	0/1:8,1:9:13.25:21,0,13	0/1:21,0:19:90.63:91,0,112	0/1:9,1:9:32.01:32,0,48	0/1:19,0:18:13.06:13,0,200	0/1:11,0:11:20.88:51,0,21	0/1:6,0:4:10.31:10,0,34	1/1:9,0:9:13.62:53,14,0	0/0:2,0:1:2.50:0,2,9	0/1:9,0:8:1.05:82,0,1	0/1:8,0:7:11.53:35,0,12	0/1:6,0:6:15.06:39,0,15	0/1:15,1:16:65.60:71,0,66	1/1:8,0:8:2.40:54,2,0	0/1:4,1:3:0.33:1,0,0	1/1:3,0:2:1.99:19,2,0
chr10	92146794	.	T	TA	2352.31	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.072;DP=478;FS=6.411;HRun=7;HaplotypeScore=69.5340;InbreedingCoeff=0.9645;MQ=69.67;MQ0=0;MQRankSum=0.532;QD=27.67;ReadPosRankSum=3.437;VQSLOD=4.4616;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:66.01:0,66,619	1/1:1,7:8:12.04:145,12,0	0/0:15,0:15:16.27:0,16,176	0/0:5,0:5:7.88:0,8,48	0/0:32,0:32:90.13:0,90,863	1/1:1,17:18:45.14:543,45,0	1/1:0,10:10:30.09:362,30,0	0/0:28,0:28:72.11:0,72,695	0/0:10,0:10:12.01:0,12,116	0/0:17,0:17:42.06:0,42,402	0/0:18,0:18:51.06:0,51,484	0/0:19,0:19:45.07:0,45,434	0/0:15,0:15:45.02:0,45,417	0/0:9,0:9:21.03:0,21,203	1/1:1,6:7:15.05:181,15,0	1/1:3,7:10:21.06:254,21,0	1/1:3,29:32:87.27:1051,87,0	0/0:14,0:14:33.05:0,33,319	0/0:16,0:16:36.05:0,36,347	0/0:24,0:24:51.07:0,51,492	0/0:10,0:10:30:0,30,280	0/0:7,0:7:21.03:0,21,203	0/0:15,0:15:42.06:0,42,405	0/0:16,0:16:42.06:0,42,405	0/0:19,0:19:48.08:0,48,463	0/0:29,0:29:75.12:0,75,724	0/0:25,0:24:60.09:0,60,579	0/0:21,0:21:51:0,51,492
chr10	92146854	.	AC	A	5629.74	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.838;DP=510;FS=7.306;HRun=1;HaplotypeScore=101.2342;InbreedingCoeff=0.9884;MQ=78.87;MQ0=0;MQRankSum=-9.945;QD=38.30;ReadPosRankSum=-0.364;VQSLOD=4.4407;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.27:0,78,1243	0/0:11,0:11:30.10:0,30,478	0/0:18,0:18:54.18:0,54,863	0/0:13,0:13:39.13:0,39,623	1/1:0,28:28:77.93:1058,78,0	0/0:20,0:20:54.18:0,54,862	0/0:15,0:15:45.14:0,45,695	0/0:29,0:29:81.22:0,81,1224	1/1:0,15:15:42.14:586,42,0	0/0:22,0:22:63.21:0,63,986	0/0:19,0:19:57.19:0,57,901	0/0:18,0:18:51.16:0,51,786	0/0:22,0:22:66.23:0,66,1054	0/0:11,0:11:33.11:0,33,527	0/0:13,0:13:39.13:0,39,618	0/0:14,0:14:42.14:0,42,671	0/0:36,0:36:99:0,108,1689	0/0:17,0:17:48.16:0,48,767	1/1:0,20:20:57.18:781,57,0	1/1:0,21:21:57.19:795,57,0	1/1:0,4:4:9.03:126,9,0	0/0:6,0:6:18.06:0,18,288	0/0:17,0:17:51.17:0,51,810	0/0:18,0:18:54.17:0,54,839	0/0:16,0:16:48.16:0,48,764	1/1:1,25:26:25.14:901,25,0	1/1:1,15:16:48.16:670,48,0	1/1:0,17:17:51.17:712,51,0
chr10	92146878	.	T	TCCACAAGG	15968.52	PASS	AB=0.697;AC=17;AF=0.304;AN=56;BaseQRankSum=12.591;DP=545;FS=0.000;HRun=0;HaplotypeScore=172.3159;InbreedingCoeff=0.9141;MQ=78.67;MQ0=0;MQRankSum=-15.822;QD=89.71;ReadPosRankSum=-4.317;VQSLOD=4.1687;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.27:0,84,2187	0/0:12,0:12:30.10:0,30,814	0/0:15,0:15:30.09:0,30,727	0/0:17,0:17:36.12:0,36,829	1/1:9,14:23:60.21:1653,60,0	0/0:22,0:22:54.17:0,54,1341	0/0:19,0:19:48.15:0,48,1228	1/1:18,17:38:96.26:3388,96,0	1/1:3,12:15:42.14:1713,42,0	0/0:22,0:22:57.15:0,57,1306	0/0:19,0:19:51.18:0,51,1319	0/0:17,0:17:42.13:0,42,1083	0/0:19,0:19:54.19:0,54,1450	0/0:14,0:14:33.11:0,33,864	0/0:16,0:16:48.16:0,48,1302	0/0:14,0:14:42.14:0,42,1139	0/0:44,0:44:99:0,132,3478	0/0:24,0:24:56.79:0,57,1712	1/1:11,6:17:45.15:1660,45,0	1/1:9,13:22:60.20:1857,60,0	1/1:8,2:10:21.07:489,21,0	0/0:7,0:7:21.07:0,21,570	0/0:18,0:18:48.16:0,48,1252	0/0:23,0:23:60.19:0,60,1570	0/0:14,0:14:33.11:0,33,895	0/1:13,10:23:27.19:2009,0,27	1/1:5,11:14:39.06:1630,39,0	1/1:3,10:14:39.13:1570,39,0
chr10	92147576	.	CGCACACGTGGCACATGCCCTT	C	8981.02	PASS	AC=38;AF=0.704;AN=54;BaseQRankSum=5.487;DP=441;FS=6.508;HRun=0;HaplotypeScore=260.0440;InbreedingCoeff=0.6318;MQ=67.03;MQ0=1;MQRankSum=-6.791;QD=35.36;ReadPosRankSum=4.046;VQSLOD=3.0068;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:57.17:0,57,3522	0/0:13,0:13:36.12:0,36,2275	0/0:18,0:14:30.10:0,30,1565	0/0:26,0:19:48.14:0,48,2069	1/1:10,0:10:4.60:67,5,0	1/1:8,2:10:3.01:138,3,0	1/1:13,0:13:9.03:393,9,0	1/1:17,0:17:24.08:993,24,0	1/1:20,1:21:3.01:123,3,0	1/1:18,0:18:33.11:1504,33,0	1/1:11,0:11:1.44:46,1,0	1/1:12,0:12:3.01:135,3,0	1/1:9,0:9:10.30:447,10,0	1/1:22,1:23:20.37:1000,20,0	0/0:32,0:32:82.52:0,83,4680	1/1:8,0:8:3.01:148,3,0	0/0:28,0:28:75.26:0,75,4459	1/1:5,0:5:3.01:123,3,0	1/1:10,0:10:12.03:359,12,0	1/1:14,1:15:3.52:108,4,0	./.	1/1:17,0:17:2.44:68,2,0	1/1:13,0:13:1.19:119,1,0	0/0:14,0:14:0.37:0,0,1	0/0:13,0:13:0.47:0,0,1	1/1:18,0:18:30.10:1314,30,0	1/1:15,1:16:24.07:914,24,0	1/1:8,0:8:21.07:981,21,0
chr10	92147579	.	ACACGTGGCACATGCCCTTG	A	9296.18	PASS	AC=38;AF=0.704;AN=54;BaseQRankSum=4.674;DP=422;FS=5.457;HRun=0;HaplotypeScore=233.0144;InbreedingCoeff=0.6225;MQ=66.42;MQ0=2;MQRankSum=-7.054;QD=38.73;ReadPosRankSum=3.927;VQSLOD=3.6294;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:56.55:0,57,3462	0/0:13,0:13:36.12:0,36,2261	0/0:20,0:14:33.11:0,33,1777	0/0:26,0:19:49.04:0,49,2070	1/1:8,0:8:4.35:67,4,0	1/1:9,1:10:3.01:138,3,0	1/1:11,1:12:9.03:458,9,0	1/1:16,0:16:24.08:993,24,0	1/1:4,15:19:3.01:162,3,0	1/1:16,0:16:33.11:1487,33,0	1/1:11,0:11:0.52:45,1,0	1/1:11,1:12:3.01:113,3,0	1/1:7,1:8:10.17:466,10,0	1/1:22,1:23:20.25:901,20,0	0/0:31,0:31:82.52:0,83,4625	1/1:6,1:7:3.01:148,3,0	0/0:28,0:28:75.26:0,75,4402	1/1:1,3:4:3.01:162,3,0	1/1:8,1:9:12.03:441,12,0	1/1:13,2:15:3.36:146,3,0	./.	1/1:17,0:17:1.62:67,2,0	1/1:11,1:12:1.09:157,1,0	0/0:13,0:13:0.37:0,0,1	0/0:10,3:13:0.47:0,0,1	1/1:18,0:18:30.10:1287,30,0	1/1:13,2:15:24.07:993,24,0	1/1:6,2:8:21.07:1065,21,0
chr10	92147581	.	ACGTGG	A	3823.57	PASS	AB=0.638;AC=40;AF=0.741;AN=54;BaseQRankSum=9.027;DP=402;FS=6.490;HRun=0;HaplotypeScore=165.6589;InbreedingCoeff=0.6281;MQ=64.45;MQ0=2;MQRankSum=-7.602;QD=15.29;ReadPosRankSum=2.870;VQSLOD=2.8266;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:56.74:0,57,1753	0/0:13,0:13:36.12:0,36,1159	0/0:19,0:13:33.11:0,33,992	0/0:27,0:19:51.75:0,52,1315	1/1:5,3:8:5.23:68,5,0	1/1:4,5:10:3.01:48,3,0	1/1:4,8:12:9.03:153,9,0	1/1:7,6:13:24.08:452,24,0	1/1:18,0:19:3.01:38,3,0	1/1:7,8:15:33.11:661,33,0	1/1:7,4:11:1.85:48,2,0	1/1:3,5:12:3.01:42,3,0	1/1:3,3:8:10.76:212,11,0	1/1:9,8:23:20.69:359,21,0	0/0:29,0:29:80.94:0,81,2481	1/1:2,5:7:3.01:58,3,0	0/0:28,0:28:75.26:0,75,2407	1/1:4,0:4:3.01:38,3,0	1/1:9,0:9:12.03:182,12,0	1/1:8,6:14:1.01:51,1,0	./.	1/1:7,7:15:3.11:71,3,0	1/1:5,6:12:1.55:49,2,0	0/1:3,3:10:0.10:0,0,0	0/1:6,2:11:0:0,0,0	1/1:6,8:15:30.10:566,30,0	1/1:9,6:15:24.06:362,24,0	1/1:2,5:7:21.07:366,21,0
chr10	92147582	.	CGTG	C	2303.78	PASS	AB=1.000;AC=40;AF=0.741;AN=54;BaseQRankSum=10.203;DP=340;FS=8.030;HRun=0;HaplotypeScore=145.4448;InbreedingCoeff=0.6151;MQ=65.75;MQ0=2;MQRankSum=-8.516;QD=12.13;ReadPosRankSum=3.485;VQSLOD=2.9786;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:54.20:0,54,1275	0/0:13,0:13:36.12:0,36,847	0/0:19,0:13:33.11:0,33,721	0/0:26,0:19:51.37:0,51,1022	1/1:5,1:6:2.33:22,2,0	1/1:9,0:9:3:29,3,0	1/1:11,0:11:9:102,9,0	1/1:8,0:8:24.03:274,24,0	1/1:17,0:17:2.98:21,3,0	1/1:9,2:11:33.11:442,33,0	1/1:5,1:6:2.02:23,2,0	1/1:10,0:10:2.99:24,3,0	1/1:7,0:7:11.20:135,11,0	1/1:16,1:17:20.70:239,21,0	0/0:30,0:30:81.19:0,81,1811	1/1:6,1:7:3.01:40,3,0	0/0:28,0:28:75.26:0,75,1769	1/1:3,0:3:2.98:21,3,0	1/1:2,1:4:9:109,9,0	1/1:9,0:10:1.95:50,2,0	./.	1/1:10,0:11:1.64:22,2,0	1/1:9,0:9:1.81:32,2,0	0/1:8,0:8:0.10:0,0,0	0/1:8,0:8:0:0,0,0	1/1:10,0:10:30.06:386,30,0	1/1:10,1:11:21.05:265,21,0	1/1:7,0:7:21:237,21,0
chr10	92147590	.	ATGCCCTTG	A	4707.11	PASS	AB=0.714;AC=31;AF=0.574;AN=54;BaseQRankSum=8.711;DP=342;FS=2.936;HRun=0;HaplotypeScore=152.9592;InbreedingCoeff=0.5861;MQ=56.44;MQ0=3;MQRankSum=-7.996;QD=30.97;ReadPosRankSum=4.365;VQSLOD=4.6925;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:49.72:0,50,1874	0/0:12,0:12:36.12:0,36,1201	0/0:24,0:12:33.04:0,33,1070	0/0:25,0:15:33.47:0,33,1213	0/0:2,4:6:0.94:0,1,2	1/1:4,5:9:3.01:72,3,0	1/1:4,8:12:11.60:259,12,0	1/1:0,6:6:18.06:497,18,0	1/1:19,0:19:2.78:57,3,0	1/1:0,10:10:30.10:807,30,0	0/0:0,5:5:1.41:0,1,3	1/1:5,5:10:3.01:66,3,0	1/1:3,3:6:8.24:239,8,0	1/1:10,9:19:22.08:540,22,0	0/0:27,0:27:72.70:0,73,2220	1/1:1,6:7:3.01:83,3,0	0/0:27,0:27:71.83:0,72,2103	1/1:3,0:3:3.01:58,3,0	0/1:3,2:5:21.80:209,0,22	1/1:5,6:11:0.99:12,1,0	./.	0/0:1,8:9:1.89:0,2,4	1/1:3,6:9:2.07:74,2,0	0/0:7,3:10:0.47:0,0,1	0/0:8,2:10:0.47:0,0,1	1/1:1,8:9:27.09:730,27,0	1/1:4,6:10:19.31:472,19,0	1/1:2,5:7:21.07:531,21,0
chr10	92147634	.	AGGCACG	A	5774.79	PASS	AB=0.710;AC=26;AF=0.520;AN=50;BaseQRankSum=6.298;DP=616;FS=52.234;HRun=0;HaplotypeScore=191.7486;InbreedingCoeff=-0.1733;MQ=47.69;MQ0=4;MQRankSum=-1.345;QD=13.18;ReadPosRankSum=3.641;VQSLOD=2.5600;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:49.93:0,50,1308	0/0:7,0:7:8.92:0,9,294	0/0:17,0:15:42.14:0,42,1131	0/0:22,0:15:41.38:0,41,864	./.	1/1:7,14:21:9.03:200,9,0	0/1:10,11:21:62.53:63,0,71	0/1:11,27:35:81.82:1363,0,82	0/1:21,5:29:34.45:435,0,34	0/1:10,25:35:99:936,0,347	0/0:7,15:21:0:0,0,0	1/1:14,14:28:0.19:283,0,0	1/1:7,14:21:8.57:292,9,0	0/1:12,14:26:33.96:177,0,34	0/1:18,0:18:52.80:53,0,350	1/1:4,12:16:9.03:198,9,0	0/1:23,0:23:25.40:25,0,566	0/1:6,2:9:40.46:208,0,40	0/1:8,9:17:99:549,0,305	1/1:11,12:23:2.76:71,3,0	1/1:9,20:29:1.43:7,1,0	./.	0/0:11,8:19:2.67:0,3,9	./.	1/1:13,12:25:3.01:54,3,0	0/1:6,16:21:60.25:696,0,60	0/1:8,13:20:99:132,0,109	0/1:6,6:12:34.80:35,0,345
chr10	92147774	.	C	CAT	1829.97	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-2.364;DP=637;FS=2.065;HRun=0;HaplotypeScore=116.6435;InbreedingCoeff=0.8612;MQ=60.07;MQ0=2;MQRankSum=-0.520;QD=34.53;ReadPosRankSum=0.141;VQSLOD=5.8272;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:93.27:0,93,1165	0/0:12,0:12:33.11:0,33,425	0/0:12,0:10:0.06:0,0,125	0/0:12,0:7:2.99:0,3,38	0/0:20,0:20:54.17:0,54,694	1/1:4,16:21:36.12:607,36,0	1/1:0,12:13:36.12:607,36,0	0/0:39,0:39:90.22:0,90,1115	0/0:24,0:24:63.20:0,63,810	0/0:34,0:34:93.29:0,93,1184	0/0:17,0:17:45.15:0,45,578	0/0:16,0:16:36.12:0,36,463	0/0:24,0:24:48.13:0,48,589	0/0:27,0:27:60.19:0,60,769	0/0:30,0:30:72.23:0,72,925	1/1:1,18:19:45.15:758,45,0	0/0:24,0:24:51.12:0,51,637	0/0:26,0:26:63.19:0,63,792	0/0:17,0:17:42.07:0,42,518	0/0:19,0:19:57.17:0,57,717	0/0:29,0:29:66.03:0,66,810	0/0:16,0:16:42.14:0,42,539	0/0:17,0:17:45.13:0,45,563	0/0:22,0:22:44.92:0,45,577	0/0:22,0:22:63.20:0,63,810	0/0:38,0:38:99:0,111,1415	0/0:25,0:25:66.18:0,66,819	0/0:18,0:18:51.11:0,51,622
chr10	92147922	.	CAT	C	13302.94	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-5.083;DP=550;FS=3.202;HRun=0;HaplotypeScore=98.0379;InbreedingCoeff=0.8963;MQ=64.36;MQ0=2;MQRankSum=3.205;QD=31.30;ReadPosRankSum=1.876;VQSLOD=6.8808;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:46:99:0,108,1839	0/0:9,0:9:27.09:0,27,459	0/1:10,0:6:4.18:4,0,33	0/0:18,0:11:8.64:0,9,87	1/1:2,24:26:54.18:709,54,0	1/1:3,8:11:21.07:280,21,0	1/1:0,7:7:21.07:275,21,0	1/1:8,36:44:99:1392,108,0	1/1:2,21:23:54.18:719,54,0	1/1:0,22:22:63.21:838,63,0	1/1:3,17:19:33.11:429,33,0	1/1:1,14:15:36.12:479,36,0	1/1:2,16:18:42.14:559,42,0	1/1:0,16:16:48.16:639,48,0	0/0:16,0:16:39.13:0,39,659	1/1:0,18:18:45.15:599,45,0	0/0:36,0:36:99:0,99,1712	1/1:2,25:27:69.23:919,69,0	1/1:3,21:24:54.18:719,54,0	1/1:4,17:21:45.15:589,45,0	1/1:0,4:4:12.04:160,12,0	1/1:1,10:11:21.07:260,21,0	1/1:0,10:10:27.09:344,27,0	1/1:1,18:19:51.06:679,51,0	1/1:1,11:12:30.10:395,30,0	1/1:2,22:24:66.22:878,66,0	1/1:1,25:26:66.22:879,66,0	1/1:0,16:17:42.14:558,42,0
chr10	92147968	.	CAT	C	1841.94	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=1.697;DP=554;FS=4.796;HRun=0;HaplotypeScore=121.4542;InbreedingCoeff=0.7898;MQ=59.57;MQ0=4;MQRankSum=-0.552;QD=23.32;ReadPosRankSum=0.424;VQSLOD=4.4239;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,5:45:1.88:0,2,1379	1/1:1,14:15:39.13:501,39,0	0/1:12,0:8:2.37:7,0,2	0/0:14,0:6:2.55:0,3,24	0/0:24,0:24:60.17:0,60,965	0/0:17,0:18:48.16:0,48,776	0/0:4,0:4:12.04:0,12,196	0/0:23,0:52:63.62:0,64,845	0/0:21,0:21:54.18:0,54,907	0/0:26,0:26:75.26:0,75,1255	0/0:22,0:21:48.15:0,48,814	0/0:8,0:8:15.05:0,15,255	0/0:13,0:13:27.09:0,27,459	0/0:20,0:20:57.16:0,57,911	1/1:1,18:18:36.12:468,36,0	0/0:16,0:16:36.12:0,36,612	1/1:5,28:33:78.25:1011,78,0	0/0:23,0:23:37.20:0,37,660	0/0:24,0:22:50.78:0,51,814	0/0:22,0:22:42.14:0,42,707	0/0:6,0:6:18.06:0,18,306	0/0:7,0:7:15.04:0,15,229	0/0:10,0:10:21.07:0,21,356	0/0:13,0:13:39.11:0,39,610	0/0:11,0:11:30.10:0,30,510	0/0:18,0:18:45.15:0,45,747	0/0:27,0:27:69.24:0,69,1160	0/0:31,0:31:84.29:0,84,1405
chr10	92148569	.	T	TC	906.06	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.680;DP=670;FS=5.952;HRun=5;HaplotypeScore=97.4965;InbreedingCoeff=0.9822;MQ=89.73;MQ0=0;MQRankSum=-1.138;QD=27.46;ReadPosRankSum=-3.952;VQSLOD=1.5630;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,174,1846	0/0:10,0:10:24.06:0,24,258	0/0:26,0:27:68.94:0,69,694	0/0:26,0:26:59.18:0,59,623	0/0:18,0:18:51.11:0,51,538	0/0:24,0:24:66.14:0,66,700	0/0:23,0:23:60.02:0,60,626	1/1:5,28:33:83.87:1001,84,0	0/0:27,0:27:78.19:0,78,838	0/0:22,0:22:57.10:0,57,590	0/0:12,0:12:36.07:0,36,378	0/0:24,0:24:59.97:0,60,602	0/0:25,0:25:66.12:0,66,689	0/0:17,0:17:45.11:0,45,483	0/0:28,0:27:78.19:0,78,837	0/0:23,0:23:69.16:0,69,733	0/0:19,0:19:54.14:0,54,580	0/0:30,0:30:87.19:0,87,925	0/0:25,0:25:63.15:0,63,672	0/0:19,0:19:51.09:0,51,530	0/0:40,0:40:99:0,117,1225	0/0:27,0:27:75.19:0,75,805	0/0:17,0:17:48.11:0,48,507	0/0:32,0:32:84.17:0,84,885	0/0:16,0:16:48.12:0,48,516	0/0:25,0:25:69.16:0,69,728	0/0:12,0:12:36.08:0,36,378	0/0:8,0:8:15.04:0,15,160
chr10	92148797	.	T	TC	1512.61	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.392;DP=602;FS=1.875;HRun=7;HaplotypeScore=97.9174;InbreedingCoeff=0.9626;MQ=75.24;MQ0=0;MQRankSum=-2.482;QD=22.24;ReadPosRankSum=-1.289;VQSLOD=2.4919;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,114,1090	0/0:12,0:12:21.03:0,21,203	0/0:16,0:16:28.15:0,28,261	0/0:26,0:24:40.97:0,41,392	0/0:13,0:13:33.05:0,33,318	1/1:1,14:15:36.11:427,36,0	1/1:9,21:30:55.02:622,55,0	0/0:27,0:27:17.91:0,18,289	0/0:18,0:18:45.07:0,45,434	0/0:24,0:24:63.08:0,63,602	0/0:14,0:14:33.02:0,33,309	0/0:23,0:23:60.08:0,60,579	0/0:22,0:22:54.08:0,54,521	0/0:22,0:22:65.97:0,66,614	0/0:21,0:21:60.07:0,60,570	1/1:5,18:23:51.15:606,51,0	0/0:35,0:35:87.11:0,87,834	0/0:16,0:16:45.07:0,45,434	0/0:17,0:17:35.76:0,36,318	0/0:11,0:11:21.03:0,21,202	0/0:45,0:45:99:0,112,1063	0/0:19,0:19:44.95:0,45,421	0/0:7,0:7:9.01:0,9,87	0/0:20,0:20:45.06:0,45,434	0/0:20,0:20:29.95:0,30,277	0/0:24,0:24:63.10:0,63,608	0/0:33,0:33:95.94:0,96,899	0/0:6,0:6:12.02:0,12,116
chr10	92149386	.	TGTGTG	T	108.61	PASS	AB=0.940;AC=7;AF=0.140;AN=50;BaseQRankSum=5.018;DP=333;FS=11.483;HRun=0;HaplotypeScore=110.7741;InbreedingCoeff=-0.0744;MQ=30.61;MQ0=23;MQRankSum=-3.768;QD=1.31;ReadPosRankSum=-2.804;VQSLOD=0.9746;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:7.79:0,8,81	0/0:6,0:6:6.90:0,7,70	./.	./.	0/0:12,0:10:1.56:0,2,90	0/0:17,0:17:1.55:0,2,7	0/1:12,3:13:6.07:106,0,6	0/0:10,0:7:20.99:0,21,227	0/1:14,0:13:0.42:0,0,201	0/0:17,0:15:38.98:0,39,621	0/0:5,0:4:5.85:0,6,86	0/0:12,0:12:6.93:0,7,59	0/0:15,0:15:15.63:0,16,184	0/0:11,0:11:12.68:0,13,157	0/0:11,0:11:4.28:0,4,38	0/1:4,2:6:5.93:67,0,6	0/0:10,0:9:12.92:0,13,140	0/0:16,0:12:23.98:0,24,283	0/0:9,0:6:14.86:0,15,206	0/1:3,0:3:14.93:15,0,50	0/1:22,0:19:3.57:4,0,140	0/0:24,0:22:12.02:0,12,190	0/1:9,0:8:3.76:4,0,69	0/0:23,0:20:4.80:0,5,75	0/1:14,0:13:20.02:20,0,170	0/0:13,0:10:29.95:0,30,519	0/0:15,0:14:11.87:0,12,250	./.
chr10	92149399	.	G	GTA	1600.05	PASS	AB=0.904;AC=42;AF=0.840;AN=50;BaseQRankSum=1.865;DP=247;FS=28.026;HRun=0;HaplotypeScore=91.8629;InbreedingCoeff=0.2535;MQ=28.19;MQ0=14;MQRankSum=-1.041;QD=7.21;ReadPosRankSum=0.073;VQSLOD=1.5307;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:2.68:9,3,0	1/1:3,0:3:0.19:0,0,0	./.	./.	0/1:11,1:10:9.66:11,0,10	1/1:15,0:15:33.13:195,33,0	1/1:10,0:8:18.63:97,19,0	1/1:4,0:2:2.96:19,3,0	0/1:11,0:10:18.66:44,0,19	1/1:11,0:9:19.85:141,20,0	0/1:3,0:3:1.75:5,0,2	1/1:9,0:9:17.57:104,18,0	1/1:10,0:10:2.34:46,2,0	1/1:8,0:9:22.40:139,22,0	0/0:8,0:8:2.56:0,3,15	1/1:5,0:5:8.38:43,8,0	0/0:7,0:6:5.30:0,5,34	1/1:7,0:4:8.61:51,9,0	1/1:7,0:6:11.88:82,12,0	1/1:3,0:3:5.94:41,6,0	0/1:15,2:14:8.17:40,0,8	1/1:17,0:15:26.35:156,26,0	1/1:4,1:4:6.32:34,6,0	1/1:19,0:18:8.89:76,9,0	1/1:11,1:11:18.13:125,18,0	1/1:10,0:9:23.08:149,23,0	1/1:11,0:11:17.72:115,18,0	./.
chr10	92150316	.	A	AT	40.84	PASS	AB=0.959;AC=10;AF=0.179;AN=56;BaseQRankSum=3.004;DP=573;FS=8.669;HRun=0;HaplotypeScore=270.5062;InbreedingCoeff=0.0717;MQ=29.96;MQ0=10;MQRankSum=-2.322;QD=0.23;ReadPosRankSum=-4.094;VQSLOD=0.7283;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:25:7.27:0,7,121	0/0:8,0:8:4.07:0,4,12	0/0:6,0:4:6.02:0,6,83	0/0:10,0:3:9.03:0,9,125	0/0:28,0:27:7.02:0,7,53	0/0:10,0:9:2.28:0,2,42	0/0:20,0:20:3.02:0,3,16	0/1:20,3:17:51.05:51,0,364	0/0:32,0:32:15.60:0,16,190	0/0:30,0:30:44.76:0,45,566	0/1:15,0:15:2.98:3,0,3	0/1:30,0:30:6.98:7,0,10	0/1:28,0:28:11.07:11,0,69	1/1:24,1:25:1.69:4,2,0	0/0:45,0:45:8.28:0,8,26	0/0:34,0:34:5.05:0,5,52	0/1:9,2:11:0.90:52,0,1	0/0:12,0:12:13.54:0,14,251	0/1:14,1:8:22.01:22,0,162	0/1:19,0:19:3.30:3,0,77	0/0:49,0:46:43.38:0,43,482	0/0:17,0:17:7.44:0,7,20	0/0:13,0:12:1.83:0,2,6	0/1:15,0:15:0.14:1,0,0	0/0:9,0:9:1.55:0,2,4	0/0:31,0:29:74.65:0,75,832	0/0:6,0:5:3.01:0,3,40	0/0:6,0:6:4.33:0,4,12
chr10	92150323	.	C	CGAA	298.61	PASS	AB=0.933;AC=12;AF=0.214;AN=56;BaseQRankSum=5.091;DP=657;FS=20.246;HRun=0;HaplotypeScore=258.6759;InbreedingCoeff=0.0467;MQ=32.17;MQ0=22;MQRankSum=-4.585;QD=1.36;ReadPosRankSum=-0.427;VQSLOD=0.3753;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:10.70:0,11,192	0/1:10,0:10:11.52:12,0,63	0/0:18,0:6:14.84:0,15,238	0/0:15,0:4:12.04:0,12,200	0/0:21,8:28:6.05:0,6,109	0/0:10,1:10:2.17:0,2,54	0/0:22,1:23:9.70:0,10,110	0/0:36,0:28:79.46:0,79,1007	0/0:34,0:34:19.73:0,20,337	0/1:23,10:33:99:292,0,572	0/0:11,4:15:2.54:0,3,16	0/1:29,1:30:19.11:47,0,19	0/1:28,0:28:16.95:17,0,99	1/1:25,0:25:1.55:5,2,0	0/0:44,6:50:8.66:0,9,121	0/1:34,2:36:33.07:33,0,106	0/1:14,1:15:7.80:8,0,147	0/0:12,0:12:26.19:0,26,341	0/0:20,0:11:31.51:0,32,391	0/0:15,4:19:10.40:0,10,125	0/0:52,5:53:43.69:0,44,723	1/1:12,6:18:1.99:5,2,0	0/0:8,6:13:1.36:0,1,10	0/1:15,1:16:0.30:1,0,0	0/1:8,1:9:0:0,0,0	0/0:35,2:35:5.24:0,5,1160	0/0:10,0:9:14.98:0,15,214	0/0:5,1:6:1.97:0,2,30
chr10	92150324	.	T	TG	319.08	PASS	AB=0.896;AC=19;AF=0.339;AN=56;BaseQRankSum=8.885;DP=711;FS=53.439;HRun=0;HaplotypeScore=302.3598;InbreedingCoeff=0.1367;MQ=32.08;MQ0=23;MQRankSum=-4.649;QD=0.92;ReadPosRankSum=-2.086;VQSLOD=0.6913;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,2:32:11.71:12,0,153	0/1:9,1:10:10.32:10,0,40	0/0:19,0:7:14.95:0,15,209	0/0:18,0:5:12.04:0,12,155	0/1:23,8:30:17.57:18,0,71	0/0:10,1:11:4.81:0,5,72	0/1:23,1:24:4.50:5,0,50	0/0:37,0:29:77.37:0,77,861	0/0:36,0:36:21.53:0,22,276	0/1:30,10:39:99:126,0,618	0/1:14,4:18:0.21:14,0,0	0/1:28,1:30:4.59:27,0,5	0/1:28,0:28:5.72:6,0,91	1/1:28,0:29:3.89:63,4,0	0/0:43,7:50:16.81:0,17,194	0/0:35,2:37:10.51:0,11,133	0/1:14,2:16:36.80:37,0,114	0/0:15,0:15:2.99:0,3,264	0/0:20,0:11:31.32:0,31,348	0/1:15,4:19:29.04:29,0,67	0/0:55,5:58:6.01:0,6,635	1/1:18,6:24:18.16:83,18,0	1/1:12,6:17:7.62:35,8,0	0/1:16,1:17:0.06:1,0,0	1/1:8,1:9:2.74:12,3,0	0/0:37,2:36:53.37:0,53,1171	0/0:13,0:12:19.80:0,20,232	0/0:5,1:6:4.06:0,4,11
chr10	92150329	.	CACAT	C	619.29	PASS	AB=0.919;AC=17;AF=0.304;AN=56;BaseQRankSum=6.500;DP=790;FS=42.180;HRun=0;HaplotypeScore=326.9217;InbreedingCoeff=0.0301;MQ=33.01;MQ0=24;MQRankSum=-3.540;QD=1.85;ReadPosRankSum=-1.800;VQSLOD=1.2371;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,1:36:24.31:0,24,443	0/1:11,0:11:9.67:10,0,101	0/0:25,0:9:26.68:0,27,518	0/0:21,0:6:12.04:0,12,288	0/0:30,2:31:17.25:0,17,268	0/0:11,0:12:2.90:0,3,70	0/0:23,0:24:3.25:0,3,49	0/0:33,0:34:38.65:0,39,1432	0/0:37,0:39:7.47:0,7,525	0/1:33,8:41:99:380,0,773	0/1:15,4:19:11.99:15,0,12	0/1:31,3:36:37.79:43,0,38	0/1:29,1:32:0.24:0,0,226	1/1:34,0:34:5.91:13,6,0	0/0:53,0:56:33.72:0,34,382	0/0:35,0:39:13.08:0,13,183	0/1:16,0:16:13.69:14,0,241	0/1:16,1:17:2.48:2,0,309	0/0:23,0:15:18.03:0,18,770	0/0:22,0:22:18.77:0,19,262	0/0:65,3:63:71.67:0,72,1581	0/1:20,5:25:6.57:7,0,80	0/1:22,2:23:13.02:13,0,29	1/1:18,3:21:8.06:49,8,0	0/1:11,1:12:7.83:19,0,8	0/1:35,3:37:99:180,0,1878	0/0:13,0:12:14.80:0,15,333	1/1:6,0:6:3.70:28,4,0
chr10	92150333	.	T	TATACACAC	1919.57	PASS	AB=0.956;AC=21;AF=0.375;AN=56;BaseQRankSum=4.371;DP=821;FS=26.075;HRun=0;HaplotypeScore=428.4138;InbreedingCoeff=0.3414;MQ=33.45;MQ0=24;MQRankSum=-3.364;QD=5.30;ReadPosRankSum=1.593;VQSLOD=0.7340;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:14.79:0,15,459	0/1:13,0:14:33.50:67,0,34	0/0:29,0:10:24.08:0,24,460	0/0:24,0:7:14.82:0,15,265	0/0:34,0:33:9.98:0,10,202	0/1:13,0:12:15.36:15,0,26	0/0:26,0:26:6.60:0,7,72	0/0:42,0:34:64.85:0,65,1118	0/0:40,0:40:18.92:0,19,515	0/1:40,2:41:40.67:908,0,41	0/0:18,1:20:0.06:0,0,2	1/1:34,3:37:6.65:60,7,0	1/1:23,10:33:10.19:256,10,0	0/1:25,8:33:20.03:20,0,20	1/1:59,0:59:13.20:132,13,0	0/0:40,0:40:23.32:0,23,237	1/1:17,0:17:19.61:145,20,0	0/1:16,0:16:29.83:307,0,30	0/0:24,0:15:28.18:0,28,660	0/0:21,0:21:4.03:0,4,236	0/0:74,0:69:77.52:0,78,1579	0/1:26,0:26:0.26:28,0,0	1/1:23,1:23:5.73:29,6,0	1/1:19,2:21:7.54:65,8,0	1/1:11,2:14:2.93:25,3,0	0/0:42,0:39:7.41:0,7,1691	0/1:13,0:12:42.32:42,0,272	0/0:6,0:6:6.31:0,6,80
chr10	92150343	.	TAC	T	294.76	PASS	AB=0.927;AC=11;AF=0.196;AN=56;BaseQRankSum=8.353;DP=971;FS=45.884;HRun=0;HaplotypeScore=419.0427;InbreedingCoeff=0.2260;MQ=35.04;MQ0=27;MQRankSum=-6.819;QD=1.24;ReadPosRankSum=-0.840;VQSLOD=0.6573;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:53.86:0,54,833	0/1:14,0:17:10.10:10,0,51	0/0:41,0:14:39:0,39,620	0/0:37,0:15:37.77:0,38,532	0/0:36,0:35:14.39:0,14,229	1/1:13,6:18:3.67:42,4,0	1/1:18,10:28:8.24:117,8,0	0/0:51,0:41:3.74:0,4,906	0/0:55,0:55:18.29:0,18,448	0/1:41,0:40:66.75:67,0,650	0/1:17,0:18:4.07:7,0,4	0/0:44,0:44:13.26:0,13,277	0/0:39,0:39:32.93:0,33,254	0/1:47,0:47:2.67:3,0,259	0/0:61,0:66:28.58:0,29,179	0/1:19,25:44:19.05:152,0,19	0/1:17,0:17:13.19:13,0,91	0/0:19,0:19:37.45:0,37,359	0/0:26,0:17:30.76:0,31,601	0/0:20,0:20:22.31:0,22,347	0/0:85,0:80:99:0,102,1722	0/0:32,1:33:12.23:0,12,198	0/0:23,1:23:6.36:0,6,69	0/0:28,0:28:25.85:0,26,403	0/0:16,0:16:11.87:0,12,149	0/0:47,0:44:38.86:0,39,1419	0/0:20,0:18:25.90:0,26,295	0/1:7,0:7:3.33:25,0,3
chr10	92150347	.	C	CACAT	1551.30	PASS	AB=0.971;AC=10;AF=0.179;AN=56;BaseQRankSum=3.454;DP=1010;FS=10.906;HRun=0;HaplotypeScore=487.4833;InbreedingCoeff=0.1351;MQ=36.35;MQ0=25;MQRankSum=-2.350;QD=5.94;ReadPosRankSum=-2.404;VQSLOD=-0.4544;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:57.22:0,57,951	0/1:15,4:19:85.17:271,0,85	0/0:43,0:14:39.13:0,39,717	0/0:44,0:20:44.27:0,44,663	0/0:37,0:37:16.78:0,17,273	0/0:20,0:19:2.78:0,3,30	0/0:29,0:29:10.42:0,10,94	0/0:50,0:40:99:0,103,1377	0/0:57,0:57:32.85:0,33,535	0/1:42,0:41:99:164,0,580	0/0:18,0:18:5.18:0,5,28	0/0:45,0:45:21.55:0,22,353	0/1:40,0:40:96.86:97,0,182	0/0:48,0:48:11.21:0,11,326	1/1:41,26:69:2.64:518,3,0	0/1:44,0:44:21.78:22,0,135	1/1:11,9:20:27.97:531,28,0	0/1:19,0:19:71.42:71,0,298	0/0:25,0:18:30.80:0,31,677	0/0:21,0:21:26.66:0,27,370	0/0:89,0:84:99:0,108,1950	0/0:36,0:36:3.55:0,4,214	0/0:24,0:23:7.83:0,8,94	0/0:29,0:29:29.18:0,29,481	0/0:18,0:18:16.79:0,17,195	0/0:50,0:48:71.13:0,71,1650	0/0:20,0:18:24.38:0,24,301	0/1:8,0:8:24.90:25,0,44
chr10	92150360	.	A	ACT	5792.28	PASS	AB=0.985;AC=29;AF=0.518;AN=56;BaseQRankSum=-0.627;DP=1050;FS=8.394;HRun=0;HaplotypeScore=492.1123;InbreedingCoeff=-0.0291;MQ=38.95;MQ0=15;MQRankSum=1.347;QD=7.44;ReadPosRankSum=3.181;VQSLOD=3.3838;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,1:49:48.83:0,49,834	0/0:18,0:19:32.93:0,33,410	0/0:52,0:24:53.27:0,53,718	0/0:58,0:31:69.01:0,69,819	1/1:34,0:35:20.07:182,20,0	1/1:20,2:22:4.81:41,5,0	0/1:28,1:29:0.17:154,0,0	0/1:54,0:47:99:304,0,360	1/1:50,2:53:34.13:401,34,0	0/1:49,0:48:99:423,0,211	0/1:20,0:21:3.12:47,0,3	0/1:44,3:47:40.06:275,0,40	0/1:39,1:40:25.72:296,0,26	0/1:45,0:45:81.36:184,0,81	0/0:69,0:68:49.14:0,49,640	1/1:41,2:42:23.54:217,24,0	0/0:21,0:21:39.17:0,39,573	0/1:19,0:19:99:170,0,114	0/1:19,1:18:25.55:233,0,26	0/1:22,0:22:46.85:144,0,47	1/1:85,0:84:71.03:948,71,0	1/1:39,0:39:14:121,14,0	1/1:26,0:26:22.16:208,22,0	0/1:32,0:32:13.65:242,0,14	0/1:19,0:19:12.95:168,0,13	0/1:49,1:50:63.58:789,0,64	0/1:21,0:20:23.45:230,0,23	0/1:4,0:7:15.36:15,0,31
chr10	92150362	.	T	TCA	11173.62	PASS	AB=0.763;AC=39;AF=0.696;AN=56;BaseQRankSum=-6.139;DP=1085;FS=5.898;HRun=0;HaplotypeScore=492.0178;InbreedingCoeff=0.5319;MQ=38.86;MQ0=15;MQRankSum=0.512;QD=13.81;ReadPosRankSum=0.767;VQSLOD=4.0941;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:32.35:0,32,730	0/0:17,0:21:15.44:0,15,313	0/0:53,0:24:44.32:0,44,610	0/0:57,0:32:56.18:0,56,650	1/1:18,16:39:20.90:357,21,0	1/1:15,7:22:7.23:89,7,0	1/1:18,12:31:16.64:304,17,0	1/1:46,12:49:43.38:654,43,0	1/1:24,29:55:37.62:691,38,0	1/1:33,15:49:12.34:876,12,0	0/1:17,3:21:3.01:90,0,3	1/1:28,21:49:8.44:489,8,0	1/1:14,25:40:10.58:474,11,0	0/1:16,28:45:17.45:330,0,17	0/0:69,0:71:49.05:0,49,587	1/1:20,22:41:25.20:338,25,0	0/0:22,0:22:43.95:0,44,553	0/1:13,5:19:22.69:300,0,23	1/1:12,10:19:29.70:534,30,0	0/1:10,12:23:30.92:282,0,31	1/1:26,54:86:99:1915,117,0	1/1:25,12:39:13.98:221,14,0	1/1:15,12:28:25.60:375,26,0	1/1:13,18:33:16.83:497,17,0	1/1:7,12:19:4.66:292,5,0	1/1:22,29:53:80.20:1599,80,0	1/1:9,9:22:3.99:414,4,0	0/1:6,1:10:10.74:53,0,11
chr10	92150365	.	C	CAG	5563.10	PASS	AB=0.990;AC=27;AF=0.482;AN=56;BaseQRankSum=-4.144;DP=1104;FS=20.228;HRun=0;HaplotypeScore=524.2552;InbreedingCoeff=-0.1238;MQ=39.31;MQ0=15;MQRankSum=3.426;QD=6.78;ReadPosRankSum=6.693;VQSLOD=2.1376;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:60.42:0,60,919	0/0:22,0:22:41.50:0,41,483	0/0:55,0:26:59.23:0,59,834	0/0:54,0:32:76.61:0,77,957	1/1:40,0:40:20.76:196,21,0	1/1:22,0:22:2.84:58,3,0	0/1:31,0:31:29.05:152,0,29	0/1:61,0:51:99:187,0,470	1/1:57,0:57:37.54:435,38,0	0/1:50,1:50:99:478,0,297	0/1:22,0:22:42.06:42,0,42	0/1:49,1:50:83.03:242,0,83	0/1:36,2:38:50.72:259,0,51	0/1:42,1:43:99:170,0,105	0/0:71,0:70:52.21:0,52,714	0/1:45,0:44:20.08:163,0,20	0/0:22,0:22:47.94:0,48,668	0/1:19,0:19:99:184,0,147	0/1:22,0:19:49.92:233,0,50	0/1:25,0:26:88.21:142,0,88	1/1:94,0:91:2.99:879,3,0	1/1:39,0:39:13.80:125,14,0	1/1:29,0:29:23.01:211,23,0	0/1:33,0:33:33.96:246,0,34	0/1:20,0:20:12:166,0,12	0/1:56,0:56:99:767,0,154	0/1:22,0:21:46.62:228,0,47	0/0:10,0:10:16.93:0,17,111
chr10	92150427	.	T	TAC	31242.01	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-7.369;DP=1470;FS=0.411;HRun=0;HaplotypeScore=492.6749;InbreedingCoeff=0.9937;MQ=45.35;MQ0=11;MQRankSum=2.530;QD=24.41;ReadPosRankSum=5.609;VQSLOD=3.3781;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:72,0:72:99:0,112,1457	1/1:10,9:19:24.67:550,25,0	0/0:49,2:25:18.71:0,19,420	0/0:64,0:42:40.22:0,40,914	1/1:11,25:36:48.15:796,48,0	1/1:13,24:35:45.15:763,45,0	1/1:33,36:69:71.43:1707,71,0	1/1:50,24:66:99:2199,143,0	1/1:25,41:66:87.08:1333,87,0	1/1:37,33:68:99:2104,126,0	1/1:13,13:26:23.19:466,23,0	1/1:32,34:66:54.41:909,54,0	1/1:21,22:44:47.85:766,48,0	1/1:28,26:54:45.03:671,45,0	1/1:35,59:92:99:2576,156,0	1/1:22,49:70:99:1751,104,0	1/1:13,15:28:60.10:927,60,0	1/1:12,16:28:58.60:950,59,0	1/1:15,11:22:37.46:740,37,0	1/1:16,17:33:51.13:836,51,0	1/1:57,95:152:99:4011,238,0	1/1:34,21:55:31.57:571,32,0	1/1:14,20:34:44.73:723,45,0	1/1:27,24:51:69.24:1157,69,0	1/1:19,14:33:19.46:450,19,0	1/1:21,46:66:99:2586,154,0	1/1:4,19:23:45.59:704,46,0	1/1:10,14:24:61.45:998,61,0
chr10	92150506	.	A	ACT	6860.77	PASS	AB=0.832;AC=24;AF=0.429;AN=56;BaseQRankSum=3.804;DP=1567;FS=5.440;HRun=0;HaplotypeScore=545.9176;InbreedingCoeff=-0.7331;MQ=50.25;MQ0=7;MQRankSum=-9.082;QD=5.19;ReadPosRankSum=-4.509;VQSLOD=1.2356;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:56,13:69:99:297,0,1855	0/1:13,0:13:30.37:30,0,286	0/1:48,10:40:99:311,0,867	0/1:70,7:54:99:342,0,775	0/1:33,10:43:99:200,0,517	0/1:28,9:36:58.65:59,0,645	0/1:41,25:66:99:191,0,1159	0/1:51,28:75:99:1160,0,1367	0/1:62,12:73:99:134,0,1173	0/1:43,13:55:99:612,0,1365	0/1:28,6:34:99:182,0,499	0/1:59,13:71:99:117,0,1085	0/1:42,16:58:99:324,0,990	0/1:53,13:65:20.99:21,0,703	0/0:76,1:76:99:0,141,1957	0/0:67,14:79:62.71:0,63,1737	0/0:28,0:28:78.06:0,78,1106	0/1:26,5:31:99:204,0,938	0/1:19,7:24:99:278,0,625	0/1:29,11:40:99:248,0,264	0/1:132,30:154:99:271,0,2765	0/1:45,16:61:99:618,0,968	0/1:32,6:38:99:341,0,591	0/0:45,15:59:20.37:0,20,1040	0/1:33,6:39:67.39:67,0,575	0/1:50,18:67:99:564,0,1652	0/1:22,3:25:3.43:3,0,723	0/1:21,6:27:99:286,0,711
chr10	92150535	.	TCA	T	5205.95	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=3.549;DP=1233;FS=0.000;HRun=0;HaplotypeScore=435.6718;InbreedingCoeff=0.9240;MQ=49.72;MQ0=7;MQRankSum=-0.998;QD=16.17;ReadPosRankSum=-2.403;VQSLOD=3.5781;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,117,1952	0/0:9,0:9:15.05:0,15,255	0/0:63,1:39:78.04:0,78,1125	0/0:66,2:37:51.94:0,52,634	1/1:16,10:26:35.71:429,36,0	0/0:31,0:32:53.67:0,54,868	0/0:54,1:55:51.49:0,51,1312	0/0:68,1:60:61.02:0,61,1664	1/1:27,30:56:82.62:1091,83,0	0/0:44,0:43:96.11:0,96,1450	0/0:35,0:35:12.43:0,12,708	0/0:52,0:51:87.10:0,87,1252	0/0:45,0:45:69.10:0,69,900	0/0:47,0:46:54.40:0,54,828	0/0:70,0:71:99:0,135,2238	0/0:59,0:59:83.55:0,84,1511	0/0:30,0:30:78.20:0,78,1253	0/0:28,0:28:69.23:0,69,1048	1/1:13,12:21:1.79:437,2,0	1/1:8,18:26:26.54:335,27,0	1/1:75,34:101:75.95:1214,76,0	0/0:44,0:44:53.90:0,54,827	0/0:30,0:30:45.12:0,45,678	0/0:48,0:47:75.25:0,75,1243	0/0:25,1:26:30.09:0,30,462	1/1:26,20:46:2.54:963,3,0	1/1:7,10:17:26.45:319,26,0	1/1:10,6:16:38.40:417,38,0
chr10	92150558	.	TAC	T	16003.27	PASS	AB=0.729;AC=42;AF=0.750;AN=56;BaseQRankSum=8.648;DP=1066;FS=0.665;HRun=0;HaplotypeScore=341.4157;InbreedingCoeff=0.8225;MQ=45.05;MQ0=13;MQRankSum=0.848;QD=19.98;ReadPosRankSum=2.865;VQSLOD=4.1363;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,2:51:99:0,117,1843	0/0:14,0:14:21.03:0,21,305	0/0:45,1:25:48.12:0,48,732	0/0:45,3:26:63.08:0,63,859	1/1:10,9:19:20.88:263,21,0	1/1:10,20:33:63.09:776,63,0	1/1:23,26:53:97.09:1235,97,0	0/1:50,22:67:87.15:979,0,87	1/1:16,34:49:71.56:948,72,0	1/1:8,20:27:75.12:939,75,0	1/1:7,20:27:38.29:515,38,0	1/1:8,33:40:93.16:1184,93,0	1/1:11,20:31:52.87:872,53,0	1/1:17,25:41:62.95:835,63,0	0/0:73,2:75:99:0,187,3014	1/1:21,34:60:95.05:1402,95,0	0/0:30,0:30:81.24:0,81,1296	1/1:8,17:26:43.22:722,43,0	1/1:15,12:23:27.03:571,27,0	1/1:7,15:22:26.77:355,27,0	1/1:56,26:75:48.06:695,48,0	1/1:10,18:28:38.37:503,38,0	1/1:4,18:22:44.94:598,45,0	1/1:9,36:45:59.01:776,59,0	1/1:11,13:24:27.09:358,27,0	1/1:11,20:31:78.12:943,78,0	1/1:5,10:16:35.92:431,36,0	0/1:3,3:6:6.78:102,0,7
chr10	92150619	.	ATG	A	592.11	PASS	AB=0.985;AC=17;AF=0.304;AN=56;BaseQRankSum=7.838;DP=870;FS=19.377;HRun=0;HaplotypeScore=354.0367;InbreedingCoeff=0.6554;MQ=55.56;MQ0=6;MQRankSum=-6.127;QD=2.73;ReadPosRankSum=-7.552;VQSLOD=-0.3929;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:96.03:0,96,1757	0/0:10,0:10:17.63:0,18,101	0/0:47,0:28:44.67:0,45,1006	0/0:54,0:32:59.15:0,59,910	0/0:38,0:38:57.21:0,57,305	0/0:29,1:30:57.18:0,57,396	0/0:37,0:37:66:0,66,394	0/0:38,0:38:10.34:0,10,330	0/0:42,1:42:47.89:0,48,392	0/1:20,1:21:12.76:83,0,13	1/1:9,0:9:1.94:23,2,0	1/1:39,0:38:13.16:144,13,0	1/1:29,0:29:6.19:91,6,0	0/1:36,0:35:39.04:101,0,39	0/0:68,1:70:99:0,182,1035	0/0:62,2:64:50.23:0,50,637	0/0:21,0:21:40.93:0,41,239	1/1:10,0:10:13.03:52,13,0	0/0:19,0:18:27.24:0,27,168	0/0:23,0:23:45.83:0,46,278	0/0:52,0:48:69.11:0,69,402	1/1:13,0:13:15.31:66,15,0	1/1:12,0:12:18.61:108,19,0	0/1:30,0:29:17.25:60,0,17	1/1:18,0:18:6.17:49,6,0	0/0:31,0:30:50.66:0,51,425	0/0:27,0:27:50.21:0,50,374	0/0:10,0:10:14.70:0,15,74
chr10	92150621	.	G	GC	1823.80	PASS	AB=0.667;AC=19;AF=0.339;AN=56;BaseQRankSum=12.909;DP=860;FS=2.671;HRun=0;HaplotypeScore=340.9580;InbreedingCoeff=0.9203;MQ=54.29;MQ0=6;MQRankSum=-11.557;QD=8.68;ReadPosRankSum=-2.575;VQSLOD=2.5129;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,99,1363	0/0:10,0:10:30.10:0,30,415	0/0:44,2:27:75.02:0,75,917	0/0:51,0:30:67.51:0,68,841	0/0:38,0:39:69.83:0,70,372	0/0:31,0:31:80.38:0,80,477	0/0:37,0:37:99:0,104,621	0/0:40,0:40:82.02:0,82,612	0/0:43,0:42:93.03:0,93,566	1/1:8,12:21:31.86:261,32,0	1/1:6,3:9:11.13:68,11,0	1/1:15,23:37:60.17:490,60,0	1/1:11,16:27:34.27:290,34,0	1/1:16,20:35:26.66:351,27,0	0/0:68,0:68:99:0,196,2698	0/0:67,0:67:99:0,173,1062	0/0:18,0:18:48.15:0,48,658	1/1:4,4:8:13.44:95,13,0	0/0:19,0:18:50.58:0,51,376	0/0:24,0:24:51.32:0,51,282	0/0:50,0:47:71.86:0,72,418	0/1:7,7:14:5.73:112,0,6	1/1:9,3:12:13.13:76,13,0	1/1:17,10:26:14.38:62,14,0	1/1:6,12:18:31.93:231,32,0	0/0:32,0:31:58.58:0,59,535	0/0:27,0:27:70.55:0,71,406	0/0:8,0:8:19.45:0,19,102
chr10	92150622	.	T	TCACAC	7326.84	PASS	AB=0.822;AC=18;AF=0.321;AN=56;BaseQRankSum=11.521;DP=864;FS=2.604;HRun=0;HaplotypeScore=364.0885;InbreedingCoeff=-0.2915;MQ=54.29;MQ0=6;MQRankSum=-9.658;QD=16.80;ReadPosRankSum=0.965;VQSLOD=3.4590;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:39:98.97:0,99,2219	0/0:10,0:10:30.10:0,30,632	0/0:44,0:27:53.25:0,53,1303	0/0:50,0:30:48.74:0,49,1150	0/1:39,0:39:99:178,0,186	0/0:31,0:31:60.39:0,60,833	0/0:35,0:37:93.50:0,94,1209	0/0:40,0:40:89.37:0,89,1273	0/1:43,0:42:99:115,0,186	0/1:10,12:22:59.01:788,0,59	0/1:6,3:9:10.90:193,0,11	0/1:15,23:38:80.40:1481,0,80	0/1:11,15:27:27.81:954,0,28	0/1:16,20:35:21.34:1215,0,21	0/0:67,0:67:99:0,193,4114	0/0:68,0:68:99:0,136,1824	0/0:18,0:18:48.16:0,48,1017	0/1:3,4:8:28.62:275,0,29	0/0:22,0:20:30.50:0,30,642	0/1:24,0:24:84.74:109,0,85	0/1:44,0:47:99:135,0,113	0/1:7,7:14:25.45:405,0,25	0/1:9,3:12:87.76:245,0,88	0/1:15,9:27:11.35:153,0,11	1/1:5,12:18:28.36:771,28,0	0/1:31,0:30:47.30:47,0,399	0/1:27,0:27:99:215,0,135	0/1:9,0:9:47.75:48,0,57
chr10	92150623	.	G	GCACA	18042.61	PASS	AB=0.593;AC=43;AF=0.768;AN=56;BaseQRankSum=5.071;DP=918;FS=5.913;HRun=0;HaplotypeScore=343.9898;InbreedingCoeff=0.8481;MQ=53.28;MQ0=6;MQRankSum=-4.831;QD=26.22;ReadPosRankSum=-3.001;VQSLOD=3.1759;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:80.84:0,81,1362	0/0:0,0:10:18.02:0,18,168	0/0:46,0:28:18.96:0,19,305	0/0:50,0:30:12.26:0,12,188	1/1:15,21:40:65.66:1449,66,0	0/1:10,0:32:30.27:355,0,30	1/1:18,0:41:74.48:407,74,0	1/1:24,0:40:5.60:335,6,0	1/1:16,26:43:73.24:1876,73,0	1/1:28,0:28:61.91:935,62,0	1/1:11,0:11:12.04:192,12,0	1/1:42,0:41:89.50:1454,89,0	1/1:30,0:30:51.17:859,51,0	1/1:39,0:39:53.24:1059,53,0	0/0:11,0:66:99:0,166,1538	1/1:26,1:69:26.78:681,27,0	0/0:3,0:18:44.79:0,45,419	1/1:10,0:10:18.06:303,18,0	1/1:25,3:26:33.05:655,33,0	1/1:11,15:26:44.61:1053,45,0	1/1:27,23:50:71.14:1517,71,0	1/1:17,0:17:24.06:384,24,0	1/1:15,0:15:12.04:208,12,0	1/1:32,0:31:11.66:166,12,0	1/1:20,0:20:36.12:609,36,0	1/1:12,17:33:81.29:1613,81,0	1/1:9,18:27:14.31:1523,14,0	1/1:3,5:9:20.88:409,21,0
chr10	92151575	.	A	AC	2937.93	PASS	AB=0.550;AC=19;AF=0.339;AN=56;BaseQRankSum=2.799;DP=429;FS=0.917;HRun=8;HaplotypeScore=86.8729;InbreedingCoeff=0.9126;MQ=82.88;MQ0=0;MQRankSum=-3.462;QD=23.89;ReadPosRankSum=1.923;VQSLOD=4.1945;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:54.90:0,55,495	0/0:7,0:7:18.01:0,18,165	0/0:14,0:14:5.22:0,5,269	0/0:11,1:12:23.98:0,24,213	0/0:12,0:12:30.01:0,30,274	0/0:20,0:20:53.98:0,54,484	0/0:23,0:23:50.92:0,51,451	0/0:17,0:17:39.02:0,39,357	0/0:19,0:19:48.01:0,48,439	1/1:2,9:11:27.08:310,27,0	1/1:1,9:10:18.05:208,18,0	1/1:3,10:13:27.08:312,27,0	1/1:0,9:9:24.07:277,24,0	1/1:1,16:17:45.11:500,45,0	0/0:17,0:17:48:0,48,432	0/0:15,0:15:45.02:0,45,412	0/0:24,0:24:60.03:0,60,549	1/1:6,11:17:33.10:380,33,0	0/0:21,0:21:51:0,51,461	0/0:10,0:10:24.01:0,24,219	0/0:19,0:19:27.31:0,27,402	0/1:2,9:11:6.40:187,0,6	1/1:2,6:9:24.06:268,24,0	1/1:1,12:13:30.09:346,30,0	1/1:2,11:13:33.04:365,33,0	0/0:19,0:19:48.01:0,48,438	0/0:25,0:25:69.03:0,69,628	0/0:8,0:8:21.01:0,21,192
chr10	92152277	.	AT	A	5841.31	PASS	AB=0.722;AC=37;AF=0.661;AN=56;BaseQRankSum=0.742;DP=581;FS=7.126;HRun=11;HaplotypeScore=87.0800;InbreedingCoeff=0.7432;MQ=72.36;MQ0=0;MQRankSum=-1.540;QD=14.90;ReadPosRankSum=2.875;VQSLOD=5.3377;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.92:0,94,933	0/0:10,0:10:27.07:0,27,288	0/0:23,0:18:15.13:0,15,215	0/1:21,1:16:11.94:12,0,115	1/1:3,9:12:22.79:183,23,0	0/0:20,0:20:48.82:0,49,467	0/0:21,0:21:54.10:0,54,554	1/1:3,14:17:9.96:288,10,0	1/1:6,20:26:34.07:399,34,0	1/1:11,12:23:38.49:309,38,0	1/1:4,12:17:45.71:342,46,0	1/1:9,6:15:25.21:200,25,0	1/1:2,14:16:35.94:292,36,0	1/1:1,11:12:29.97:246,30,0	0/0:22,0:22:57.01:0,57,590	0/0:19,2:22:13.69:0,14,533	0/0:38,0:38:90.12:0,90,921	0/1:8,17:25:10.05:340,0,10	1/1:4,17:22:51.68:401,52,0	1/1:8,12:20:39.55:308,40,0	1/1:4,18:22:26.91:370,27,0	1/1:11,19:30:63.93:506,64,0	1/1:10,6:16:6.59:187,7,0	1/1:3,26:29:65.92:542,66,0	1/1:2,16:18:29.91:240,30,0	0/1:7,12:19:18.55:215,0,19	1/1:6,14:21:14.95:313,15,0	1/1:2,7:9:17.77:148,18,0
chr10	92152833	.	G	GT	6188.59	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=13.940;DP=421;FS=5.840;HRun=1;HaplotypeScore=103.2530;InbreedingCoeff=0.9532;MQ=33.09;MQ0=47;MQRankSum=-5.017;QD=24.27;ReadPosRankSum=-0.437;VQSLOD=4.4388;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:32:78.25:0,78,1011	0/0:8,0:8:24.08:0,24,311	0/0:2,0:2:6.01:0,6,65	0/0:4,0:4:9.03:0,9,115	1/1:5,15:16:33.02:410,33,0	0/0:18,0:16:30.09:0,30,375	0/0:15,0:14:39.13:0,39,501	0/0:34,0:23:54.12:0,54,659	1/1:0,15:6:18.03:226,18,0	1/1:1,10:9:19.30:275,19,0	1/1:2,8:9:26.96:297,27,0	1/1:3,15:13:33.99:446,34,0	1/1:2,11:12:31.34:411,31,0	1/1:2,17:17:45.58:599,46,0	0/0:10,0:10:21.07:0,21,271	0/0:13,0:12:36.12:0,36,467	0/0:21,0:17:42.10:0,42,525	1/1:7,10:10:21.54:286,22,0	1/1:3,3:4:8.54:112,9,0	1/1:8,16:18:45.06:568,45,0	1/1:3,9:9:21.07:278,21,0	1/1:1,9:8:24.08:337,24,0	1/1:3,7:6:15.04:191,15,0	1/1:4,11:10:18.90:228,19,0	1/1:2,13:12:33.11:455,33,0	1/1:2,17:16:42.10:548,42,0	1/1:3,11:11:28.82:355,29,0	1/1:0,5:4:12.04:166,12,0
chr10	92152930	.	TG	T	5041.29	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=6.751;DP=550;FS=1.595;HRun=9;HaplotypeScore=86.3565;InbreedingCoeff=0.9328;MQ=71.72;MQ0=0;MQRankSum=-3.758;QD=21.45;ReadPosRankSum=0.678;VQSLOD=5.4054;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:52.87:0,53,828	0/0:7,0:7:6.05:0,6,53	0/1:16,0:14:0.30:0,0,240	0/0:18,1:19:20.16:0,20,274	0/0:21,0:21:63.14:0,63,710	0/0:20,0:20:48.10:0,48,539	0/0:16,0:16:39.12:0,39,450	1/1:3,17:20:51:457,51,0	0/0:24,0:23:57.17:0,57,657	1/1:3,20:23:54.01:494,54,0	1/1:1,11:12:30.02:274,30,0	1/1:2,30:32:84.04:768,84,0	1/1:3,23:26:57.03:521,57,0	1/1:1,22:23:66.04:604,66,0	0/0:8,0:16:8.52:0,9,43	0/0:17,1:18:17.64:0,18,442	0/0:11,0:30:14.33:0,14,77	1/1:0,20:20:57.03:522,57,0	0/0:15,0:16:36.11:0,36,415	0/0:12,0:12:33.09:0,33,371	0/0:34,0:34:87.24:0,87,993	1/1:3,8:11:24.01:220,24,0	1/1:1,10:11:30.02:274,30,0	1/1:1,27:28:66.03:604,66,0	1/1:1,12:13:33.02:302,33,0	0/0:20,0:20:39.12:0,39,450	0/0:23,0:22:57.17:0,57,656	0/0:11,0:11:33.10:0,33,381
chr10	92155224	.	T	TGGGAGAGA	4600.08	PASS	AB=0.966;AC=20;AF=0.357;AN=56;BaseQRankSum=12.332;DP=584;FS=29.535;HRun=0;HaplotypeScore=183.3837;InbreedingCoeff=-0.5620;MQ=66.87;MQ0=5;MQRankSum=-6.485;QD=10.67;ReadPosRankSum=-5.813;VQSLOD=0.3738;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:40:15.04:0,15,350	0/1:12,0:12:41.94:42,0,133	0/0:30,0:21:38.38:0,38,435	0/0:26,0:19:29.02:0,29,302	0/1:16,0:15:98.25:98,0,180	0/1:8,0:15:40.90:48,0,41	0/1:33,0:32:99:666,0,169	0/1:24,0:23:99:145,0,236	0/1:25,0:25:95.72:472,0,96	0/1:21,0:20:99:391,0,108	0/0:11,0:10:8.97:0,9,75	0/1:33,0:32:99:619,0,164	0/1:24,0:24:99:462,0,205	0/1:17,0:17:99:234,0,122	0/1:16,0:15:99:208,0,138	0/1:21,0:19:99:167,0,165	0/1:9,6:19:89.84:144,0,90	0/1:14,0:14:89.96:188,0,90	0/1:21,0:20:82.81:83,0,256	0/0:14,0:13:14.83:0,15,111	0/1:41,0:40:99:154,0,184	0/1:14,0:14:64.83:85,0,65	0/0:10,0:8:11.99:0,12,100	0/1:21,0:21:5.10:5,0,84	0/1:24,0:24:99:244,0,156	0/1:19,0:16:99:146,0,207	0/0:13,0:13:26.96:0,27,222	0/0:7,0:6:7.63:0,8,73
chr10	92155226	.	G	GGAGAGA	5861.12	PASS	AB=0.765;AC=43;AF=0.977;AN=44;BaseQRankSum=0.343;DP=613;FS=0.000;HRun=0;HaplotypeScore=169.5245;InbreedingCoeff=-0.0785;MQ=64.82;MQ0=5;MQRankSum=-2.232;QD=11.70;ReadPosRankSum=1.380;VQSLOD=3.9420;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:50:1.09:138,0,1	1/1:10,1:13:3.01:76,3,0	./.	./.	1/1:17,0:16:6.02:141,6,0	1/1:17,0:17:6.02:119,6,0	1/1:33,0:32:33.07:700,33,0	1/1:26,0:25:27.98:388,28,0	1/1:23,0:23:27.08:558,27,0	1/1:20,0:19:18.95:429,19,0	./.	1/1:34,0:33:32.62:668,33,0	1/1:25,0:25:27.98:524,28,0	1/1:17,0:17:12.04:250,12,0	1/1:15,0:15:9.03:246,9,0	1/1:20,0:18:9.02:193,9,0	1/1:17,0:19:2.11:77,2,0	1/1:13,0:13:9.03:176,9,0	1/1:23,0:22:6.91:150,7,0	./.	1/1:42,0:41:11.77:272,12,0	1/1:16,0:16:3.01:71,3,0	./.	1/1:19,0:19:2.78:44,3,0	1/1:24,0:24:21.06:361,21,0	1/1:20,0:17:12.02:231,12,0	./.	1/1:11,0:10:7.89:50,8,0
chr10	92155558	.	A	AC	5965.11	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-9.816;DP=656;FS=1.922;HRun=7;HaplotypeScore=65.0871;InbreedingCoeff=0.9987;MQ=80.81;MQ0=0;MQRankSum=-1.665;QD=30.43;ReadPosRankSum=0.947;VQSLOD=5.3319;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,123,1167	0/0:9,0:9:21.03:0,21,203	0/0:23,0:23:49.65:0,50,429	0/0:17,0:17:23.65:0,24,206	1/1:2,23:25:63.19:760,63,0	0/0:19,0:19:51.01:0,51,481	0/0:30,0:30:81.13:0,81,782	0/0:24,0:24:63.05:0,63,592	1/1:1,26:27:63.14:742,63,0	0/0:33,0:33:93.15:0,93,896	0/0:16,0:14:39.06:0,39,376	0/0:19,0:19:51.08:0,51,492	0/0:12,0:12:33.05:0,33,318	0/0:21,0:21:63.09:0,63,602	0/0:25,0:25:75.12:0,75,724	0/0:25,0:25:66.04:0,66,623	0/0:35,0:35:84.09:0,84,798	0/0:22,0:22:66.06:0,66,628	1/1:6,11:17:33.10:397,33,0	1/1:2,20:22:51.16:614,51,0	1/1:4,24:28:72.17:842,72,0	0/0:25,0:25:66.10:0,66,636	0/0:24,0:24:60.09:0,60,579	0/0:12,0:12:27.04:0,27,261	0/0:23,0:23:63.10:0,63,608	1/1:2,24:26:69.16:795,69,0	1/1:5,33:38:99:1344,114,0	1/1:0,13:13:39.12:471,39,0
chr10	92156633	.	C	CT	1945.79	PASS	AB=1.000;AC=38;AF=0.704;AN=54;BaseQRankSum=-0.223;DP=155;FS=17.333;HRun=1;HaplotypeScore=26.1341;InbreedingCoeff=0.2614;MQ=84.15;MQ0=3;MQRankSum=-1.240;QD=19.86;ReadPosRankSum=3.351;VQSLOD=2.0883;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.08:0,48,579	1/1:1,0:1:2.68:11,3,0	0/0:14,0:7:15.89:0,16,144	0/0:16,0:7:1.30:0,1,92	1/1:1,4:5:14.68:165,15,0	0/1:6,0:6:12.75:22,0,13	0/1:4,0:4:11.63:24,0,12	0/0:8,0:8:15.05:0,15,194	1/1:0,6:6:12.04:179,12,0	1/1:2,0:2:5.09:19,5,0	0/1:4,0:4:15.03:15,0,18	0/1:7,0:7:20.08:20,0,39	0/1:6,0:6:8.50:64,0,8	./.	1/1:2,0:2:2.74:12,3,0	0/1:3,0:3:17.92:23,0,18	1/1:4,0:4:11.27:54,11,0	1/1:2,0:2:5.42:23,5,0	1/1:1,8:9:27.07:354,27,0	1/1:1,5:6:15:198,15,0	1/1:2,8:10:22.89:312,23,0	0/0:1,0:1:3:0,3,27	1/1:1,0:1:2.68:11,3,0	1/1:2,0:2:2.74:12,3,0	1/1:5,0:5:8.23:36,8,0	1/1:1,4:5:15.04:205,15,0	1/1:0,5:5:15.05:224,15,0	1/1:0,3:3:9.03:131,9,0
chr10	92156634	.	T	TC	1983.53	PASS	AC=44;AF=0.846;AN=52;BaseQRankSum=0.334;DP=148;FS=19.158;HRun=6;HaplotypeScore=23.7819;InbreedingCoeff=0.5624;MQ=85.23;MQ0=3;MQRankSum=-0.947;QD=21.10;ReadPosRankSum=0.900;VQSLOD=1.6142;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.09:0,42,428	1/1:0,1:1:3.01:38,3,0	0/0:14,0:7:4.71:0,5,35	0/0:16,0:7:2.86:0,3,51	1/1:5,0:5:14.15:93,14,0	1/1:1,5:6:9.03:113,9,0	1/1:1,3:4:9.03:113,9,0	0/0:7,0:7:15.03:0,15,153	1/1:5,0:5:11.95:92,12,0	1/1:0,2:2:6.02:75,6,0	1/1:1,3:4:6.02:75,6,0	1/1:2,5:7:9.03:113,9,0	1/1:1,5:6:15.05:189,15,0	./.	1/1:0,2:2:3.01:38,3,0	1/1:1,2:3:6.02:75,6,0	1/1:0,4:4:12.04:151,12,0	1/1:0,2:2:6.02:75,6,0	1/1:8,0:8:20.67:136,21,0	1/1:5,0:5:11.96:95,12,0	1/1:9,0:9:22.73:174,23,0	./.	1/1:0,1:1:3.01:38,3,0	1/1:0,2:2:3.01:38,3,0	1/1:0,5:5:9.03:113,9,0	1/1:5,0:5:14.64:98,15,0	1/1:5,0:5:14.91:113,15,0	1/1:3,0:3:8.97:79,9,0
chr10	92157585	.	T	TC	121.96	PASS	AB=0.675;AC=1;AF=0.018;AN=56;BaseQRankSum=-1.597;DP=401;FS=3.505;HRun=0;HaplotypeScore=63.4445;InbreedingCoeff=-0.0383;MQ=54.85;MQ0=29;MQRankSum=-0.099;QD=4.52;ReadPosRankSum=0.316;VQSLOD=2.9768;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:67.48:0,67,511	0/0:5,0:4:9.26:0,9,64	0/0:27,0:3:8.71:0,9,57	0/0:19,0:7:3.59:0,4,72	0/0:11,0:11:26.94:0,27,226	0/0:14,0:14:34.90:0,35,278	0/0:21,0:20:48.51:0,49,354	0/1:14,13:25:80.31:196,0,80	0/0:11,0:11:23.93:0,24,198	0/0:12,0:11:29:0,29,243	0/0:7,0:6:14.89:0,15,114	0/0:15,0:14:32.72:0,33,265	0/0:14,0:13:16.96:0,17,188	0/0:8,0:7:17.85:0,18,135	0/0:11,0:11:17.16:0,17,222	0/0:15,0:15:30.93:0,31,226	0/0:31,0:30:62.30:0,62,491	0/0:14,0:13:26.80:0,27,202	0/0:14,0:11:32.32:0,32,261	0/0:7,0:7:14.99:0,15,129	0/0:9,0:8:14.66:0,15,129	0/0:9,0:9:20.74:0,21,140	0/0:4,0:4:8.95:0,9,68	0/0:10,0:9:6:0,6,54	0/0:7,0:6:14.59:0,15,113	0/0:20,0:18:35.94:0,36,309	0/0:22,0:20:19.71:0,20,228	0/0:8,0:7:20.82:0,21,165
chr10	92160198	.	AAAAG	A	3429.87	PASS	AB=0.995;AC=35;AF=0.625;AN=56;BaseQRankSum=7.491;DP=565;FS=14.164;HRun=0;HaplotypeScore=110.0279;InbreedingCoeff=-0.1647;MQ=42.57;MQ0=31;MQRankSum=-0.428;QD=6.77;ReadPosRankSum=5.437;VQSLOD=1.2108;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:67.26:0,67,1145	0/1:9,0:8:5.90:102,0,6	0/1:50,0:13:9.79:10,0,157	0/1:51,0:13:11.34:11,0,69	1/1:25,1:25:41.91:321,42,0	0/1:17,0:17:14.46:14,0,35	0/0:13,0:13:5.68:0,6,25	0/1:40,0:38:99:152,0,497	0/1:12,1:11:3.19:103,0,3	0/1:20,0:17:22.48:199,0,22	1/1:13,0:12:1.19:128,1,0	0/1:9,0:7:6.27:37,0,6	1/1:11,0:11:16.62:176,17,0	1/1:7,1:8:16.09:158,16,0	0/1:15,0:13:9.87:69,0,10	0/0:14,0:14:9.12:0,9,63	1/1:30,0:26:8.68:178,9,0	0/1:16,0:14:16.85:62,0,17	0/1:28,0:25:39.60:171,0,40	1/1:18,0:16:36.79:282,37,0	0/1:10,0:8:28.56:29,0,33	1/1:7,1:8:12.10:97,12,0	0/1:17,0:15:16.94:160,0,17	1/1:16,0:16:24.63:201,25,0	1/1:10,0:9:0.89:68,1,0	1/1:27,0:21:22.44:322,22,0	0/1:25,0:24:11.06:282,0,11	0/1:20,0:17:51.10:97,0,51
chr10	92160202	.	GAAAA	G	5946.36	PASS	AB=0.846;AC=46;AF=0.821;AN=56;BaseQRankSum=-0.771;DP=553;FS=8.945;HRun=15;HaplotypeScore=102.3072;InbreedingCoeff=0.4868;MQ=45.99;MQ0=30;MQRankSum=-1.971;QD=13.89;ReadPosRankSum=6.984;VQSLOD=1.3352;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:78.05:0,78,1368	1/1:3,6:8:17.89:221,18,0	0/0:52,0:15:32.64:0,33,319	0/1:54,0:14:1.99:2,0,107	1/1:7,17:24:41.68:551,42,0	0/1:8,0:16:18.70:19,0,22	1/1:1,0:13:8.64:22,9,0	0/0:24,0:41:59.09:0,59,718	1/1:7,6:11:14.91:204,15,0	1/1:6,12:16:32.72:445,33,0	1/1:8,5:12:18.71:209,19,0	1/1:6,2:6:2.73:41,3,0	1/1:4,8:12:17.48:243,17,0	1/1:4,3:7:14.90:203,15,0	1/1:5,10:13:11.16:163,11,0	1/1:4,0:13:8.64:22,9,0	0/1:17,11:24:20.81:332,0,21	1/1:5,9:13:8.76:122,9,0	1/1:8,16:22:32.11:433,32,0	1/1:3,12:14:36.07:475,36,0	0/1:10,0:8:13.86:72,0,14	1/1:3,3:6:8.96:122,9,0	1/1:8,8:15:11.95:230,12,0	1/1:3,13:17:23.07:307,23,0	1/1:4,6:9:11.97:162,12,0	1/1:14,12:20:48.06:615,48,0	1/1:9,16:24:38.95:524,39,0	1/1:10,8:17:16.30:207,16,0
chr10	92160206	.	A	AAG	509.18	PASS	AB=0.972;AC=13;AF=0.232;AN=56;BaseQRankSum=-0.682;DP=553;FS=2.497;HRun=0;HaplotypeScore=109.7539;InbreedingCoeff=-0.2733;MQ=46.80;MQ0=30;MQRankSum=-0.354;QD=2.50;ReadPosRankSum=-1.242;VQSLOD=1.7423;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:88.95:0,89,934	0/1:9,0:8:1.16:1,0,74	0/0:59,0:19:38.14:0,38,387	0/0:53,0:13:14.79:0,15,112	0/1:26,0:25:49.61:50,0,114	0/0:17,0:17:32.92:0,33,281	0/0:13,0:13:17.17:0,17,179	0/0:44,0:43:83.80:0,84,682	0/1:12,0:10:6.89:7,0,80	0/1:16,0:14:90.12:124,0,90	0/1:13,0:12:37.43:37,0,54	0/0:7,0:5:8.18:0,8,64	0/1:12,0:12:17.20:17,0,86	0/0:6,1:7:8.52:0,9,80	0/1:15,0:13:3.71:9,0,4	0/0:13,0:13:17.16:0,17,168	0/0:26,1:23:27.57:0,28,170	0/0:14,0:13:23.66:0,24,167	0/1:24,0:21:73.12:73,0,159	0/1:14,0:13:68.35:72,0,68	0/1:6,4:8:33.70:46,0,34	0/0:6,0:6:5.38:0,5,50	0/0:14,0:13:18.23:0,18,133	0/0:17,0:17:7.60:0,8,90	0/1:10,0:9:22.02:22,0,75	0/1:23,2:20:99:146,0,112	0/0:21,1:22:0.13:0,0,145	0/1:18,0:16:48.65:49,0,136
chr10	92160500	.	G	GA	1568.05	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-5.055;DP=587;FS=6.451;HRun=7;HaplotypeScore=100.3727;InbreedingCoeff=0.9765;MQ=56.93;MQ0=9;MQRankSum=2.179;QD=24.12;ReadPosRankSum=1.313;VQSLOD=3.5429;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:99:0,126,1209	1/1:1,8:8:18.06:217,18,0	0/0:18,0:11:29.88:0,30,274	0/0:13,0:7:18.02:0,18,169	0/0:21,0:20:39.06:0,39,376	0/0:22,0:21:48.07:0,48,463	0/0:18,0:17:42.06:0,42,405	0/0:38,0:36:55.91:0,56,711	0/0:13,0:13:30.03:0,30,288	0/0:23,0:23:53.71:0,54,521	0/0:13,0:12:12.01:0,12,116	0/0:14,0:14:36.05:0,36,348	0/0:12,0:12:33.03:0,33,312	0/0:15,0:15:33.05:0,33,318	1/1:3,19:22:51.16:616,51,0	0/0:15,0:15:33.04:0,33,313	1/1:5,29:34:49.28:877,49,0	0/0:27,0:25:53.98:0,54,516	0/0:30,0:30:78.10:0,78,743	0/0:21,0:21:54.02:0,54,513	0/0:14,0:14:33.05:0,33,318	0/0:16,0:16:39.03:0,39,371	0/0:15,0:14:27.03:0,27,258	0/0:37,0:37:81.12:0,81,779	0/0:8,0:8:15.02:0,15,145	0/0:32,0:29:81.11:0,81,775	0/0:28,0:28:75.10:0,75,723	0/0:12,0:12:36.03:0,36,338
chr10	92163562	.	CA	C	4432.65	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=3.685;DP=483;FS=3.329;HRun=8;HaplotypeScore=53.8058;InbreedingCoeff=0.9468;MQ=85.19;MQ0=0;MQRankSum=-1.295;QD=22.05;ReadPosRankSum=3.579;VQSLOD=5.3427;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,1199	0/0:5,0:5:15.05:0,15,180	0/0:12,0:12:2.05:0,2,195	0/0:18,0:18:10.99:0,11,277	0/0:13,0:13:36.10:0,36,425	1/1:2,10:12:30.05:290,30,0	1/1:2,18:20:45.07:435,45,0	0/0:23,0:23:66.18:0,66,777	0/0:18,0:18:54.15:0,54,638	1/1:3,17:20:48.06:463,48,0	1/1:1,3:4:9.01:87,9,0	1/1:0,19:19:30.04:290,30,0	1/1:2,20:22:48.08:464,48,0	1/1:2,18:20:45.07:434,45,0	0/0:13,0:13:39.12:0,39,471	1/1:1,17:18:45.07:435,45,0	0/0:45,0:45:99:0,129,1555	1/1:1,17:18:48.07:464,48,0	0/0:23,0:22:63.18:0,63,750	0/0:8,0:8:18.05:0,18,208	0/0:32,0:32:84.23:0,84,992	1/1:2,9:11:24.50:232,25,0	1/1:1,9:10:21.03:203,21,0	1/1:1,15:16:39.06:377,39,0	1/1:0,11:11:27.04:261,27,0	0/0:13,0:13:33.09:0,33,389	0/0:18,0:17:45.12:0,45,522	0/0:4,0:4:9.03:0,9,109
chr10	92163666	.	A	AG	8104.17	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-13.988;DP=579;FS=5.626;HRun=5;HaplotypeScore=58.4695;InbreedingCoeff=0.9928;MQ=86.81;MQ0=0;MQRankSum=-1.985;QD=32.81;ReadPosRankSum=1.699;VQSLOD=5.5505;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:96.23:0,96,1029	0/0:6,0:6:15.04:0,15,161	0/0:27,0:27:65.79:0,66,653	0/0:19,0:19:49.73:0,50,517	0/0:11,0:11:27.07:0,27,290	1/1:1,20:21:51.17:670,51,0	1/1:2,23:25:54.18:711,54,0	0/0:19,0:19:51.12:0,51,543	0/0:20,0:20:54.13:0,54,580	1/1:1,16:17:45.15:589,45,0	1/1:3,10:13:33.09:419,33,0	1/1:1,28:29:81.26:1066,81,0	1/1:0,18:18:48.09:631,48,0	1/1:1,15:16:42.14:548,42,0	0/0:23,0:23:60.14:0,60,636	1/1:3,20:23:57.16:749,57,0	0/0:28,0:28:78.19:0,78,838	1/1:1,23:24:63.20:829,63,0	0/0:14,0:14:33.08:0,33,355	0/0:10,0:10:27.07:0,27,290	0/0:61,0:61:99:0,150,1611	1/1:0,15:15:42.61:552,43,0	1/1:1,8:9:24.08:314,24,0	1/1:1,15:16:42.14:552,42,0	1/1:3,18:21:36.12:473,36,0	0/0:22,1:23:29.69:0,30,664	0/0:26,0:26:75.15:0,75,787	0/0:5,0:5:12.03:0,12,129
chr10	92165739	.	C	CACCTGGGGCAGCTGGGGCCTG	15116.43	PASS	AC=24;AF=0.444;AN=54;BaseQRankSum=5.232;DP=588;FS=0.488;HRun=0;HaplotypeScore=309.3580;InbreedingCoeff=0.8760;MQ=77.36;MQ0=0;MQRankSum=-9.598;QD=58.36;ReadPosRankSum=-4.722;VQSLOD=3.0898;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:66.19:0,66,3343	0/0:3,0:3:9.03:0,9,494	0/0:13,0:12:1.82:0,2,5	0/0:19,0:19:4.26:0,4,127	0/0:9,0:9:18.06:0,18,838	1/1:20,0:19:21.07:1169,21,0	1/1:31,0:31:57.20:3536,57,0	0/0:17,0:17:9.01:0,9,162	0/0:12,0:12:21.06:0,21,815	1/1:25,0:25:30.08:1304,30,0	./.	1/1:27,0:27:27.09:1669,27,0	1/1:15,1:16:6.01:520,6,0	1/1:29,2:31:27.08:1723,27,0	0/0:19,0:19:33.10:0,33,1463	1/1:15,1:16:21.06:1743,21,0	0/0:48,0:48:78.24:0,78,3714	1/1:28,0:28:26.98:1412,27,0	0/0:27,0:27:21.07:0,21,1065	0/0:14,0:14:24.07:0,24,879	0/0:48,0:48:84.22:0,84,3526	1/1:12,0:12:8.88:607,9,0	1/1:13,0:13:3.01:73,3,0	1/1:20,0:20:9.03:125,9,0	1/1:20,0:20:24.08:1235,24,0	0/0:20,0:20:33.10:0,33,1555	0/0:23,0:23:30.10:0,30,1472	0/0:9,0:9:21.06:0,21,1020
chr10	92167727	.	AT	A	1376.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.106;DP=788;FS=0.000;HRun=1;HaplotypeScore=77.2978;InbreedingCoeff=0.9999;MQ=85.44;MQ0=0;MQRankSum=1.020;QD=37.19;ReadPosRankSum=-5.178;VQSLOD=1.9340;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,2215	0/0:15,0:15:45.14:0,45,693	0/0:33,0:33:89.84:0,90,1475	0/0:17,0:17:51.17:0,51,795	0/0:31,0:31:93.30:0,93,1463	0/0:20,0:20:60.20:0,60,959	0/0:29,0:29:87.28:0,87,1364	1/1:0,37:37:99:1471,108,0	0/0:29,0:29:87.30:0,87,1384	0/0:32,0:32:96.31:0,96,1481	0/0:17,0:17:48.15:0,48,741	0/0:35,0:35:99:0,105,1678	0/0:30,0:30:90.29:0,90,1413	0/0:36,0:36:99:0,108,1723	0/0:37,0:37:99:0,111,1773	0/0:32,0:32:96.33:0,96,1532	0/0:34,0:34:96.31:0,96,1506	0/0:33,0:33:96.33:0,96,1523	0/0:26,0:26:75.26:0,75,1199	0/0:25,0:25:75.24:0,75,1172	0/0:37,0:37:99:0,108,1726	0/0:23,0:23:69.24:0,69,1103	0/0:22,0:22:66.21:0,66,1031	0/0:23,0:23:69.22:0,69,1074	0/0:31,0:31:93.32:0,93,1483	0/0:24,0:24:72.25:0,72,1150	0/0:19,0:19:57.18:0,57,887	0/0:14,0:14:42.14:0,42,671
chr10	92168072	.	CG	C	5993.74	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.571;DP=688;FS=4.231;HRun=6;HaplotypeScore=67.6890;InbreedingCoeff=0.9995;MQ=89.19;MQ0=0;MQRankSum=-7.287;QD=25.84;ReadPosRankSum=4.138;VQSLOD=5.2297;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1400	0/0:14,0:14:24.08:0,24,316	0/0:26,0:26:60.16:0,60,763	0/0:24,0:24:50.85:0,51,580	0/0:22,0:22:63.18:0,63,798	0/0:15,0:15:45.14:0,45,578	0/0:33,0:33:93.17:0,93,1140	0/0:32,0:32:84.20:0,84,1033	0/0:22,0:22:63.18:0,63,800	1/1:4,24:28:69.15:733,69,0	1/1:2,13:15:39.10:418,39,0	1/1:2,20:22:51.13:546,51,0	1/1:1,25:26:60.15:643,60,0	1/1:3,27:30:75.19:805,75,0	0/0:23,0:23:63.20:0,63,828	0/0:32,0:32:90.29:0,90,1183	0/0:34,1:35:64:0,64,1120	1/1:1,22:23:60.15:644,60,0	0/0:27,0:27:69.21:0,69,891	0/0:21,0:21:57.17:0,57,736	0/0:28,0:28:75.20:0,75,940	1/1:4,25:29:66.12:692,66,0	1/1:2,17:19:45.11:482,45,0	1/1:3,20:23:60.15:644,60,0	1/1:2,15:17:36.09:386,36,0	0/0:25,0:25:66.21:0,66,852	0/0:29,0:29:81.26:0,81,1065	0/0:11,0:11:27.08:0,27,342
chr10	92168078	.	GT	G	996.93	PASS	AB=0.978;AC=18;AF=0.321;AN=56;BaseQRankSum=18.209;DP=664;FS=2.668;HRun=2;HaplotypeScore=81.9449;InbreedingCoeff=0.8667;MQ=87.92;MQ0=0;MQRankSum=-2.931;QD=4.49;ReadPosRankSum=5.797;VQSLOD=0.8597;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1586	0/0:8,0:8:24.08:0,24,343	0/0:25,0:25:69.18:0,69,927	0/0:20,0:20:52.27:0,52,708	0/0:21,0:21:63.20:0,63,891	0/0:17,0:17:51.13:0,51,688	0/0:31,0:31:93.31:0,93,1347	0/0:33,0:33:96.27:0,96,1278	0/0:23,0:23:69.19:0,69,945	1/1:25,0:25:6.92:71,7,0	1/1:14,1:15:9.48:119,9,0	0/1:21,1:22:5.17:106,0,5	1/1:26,0:26:21.14:134,21,0	0/1:30,0:30:1.36:136,0,1	0/0:25,0:25:75.19:0,75,1003	0/0:32,0:32:96.30:0,96,1361	0/0:35,0:35:98.90:0,99,1392	1/1:22,0:22:42.02:139,42,0	0/0:25,0:25:72.21:0,72,1000	0/0:21,0:21:57.18:0,57,808	0/0:28,0:28:84.21:0,84,1143	1/1:27,1:28:21.28:132,21,0	1/1:17,1:18:34.42:161,34,0	1/1:21,0:21:22.65:124,23,0	1/1:15,0:15:24.08:79,24,0	0/0:22,0:22:66.22:0,66,960	0/0:28,0:28:84.26:0,84,1188	0/0:10,0:10:27.08:0,27,373
chr10	92170383	.	AGC	A	2943.05	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.751;DP=610;FS=3.726;HRun=0;HaplotypeScore=70.7485;InbreedingCoeff=0.9563;MQ=82.45;MQ0=0;MQRankSum=-2.449;QD=40.88;ReadPosRankSum=4.444;VQSLOD=5.7579;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1893	1/1:0,6:6:12.04:196,12,0	0/0:12,0:12:36.12:0,36,664	0/0:22,0:22:64.98:0,65,1167	0/0:19,0:19:57.18:0,57,1116	0/0:15,0:15:45.15:0,45,878	0/0:31,0:31:93.30:0,93,1795	0/0:19,0:19:57.20:0,57,1106	0/0:19,0:19:57.20:0,57,1149	0/0:23,0:23:63.22:0,63,1256	0/0:7,0:7:20.74:0,21,359	0/0:29,0:29:87.28:0,87,1702	0/0:19,0:19:57.17:0,57,1100	0/0:37,0:37:99:0,111,2250	1/1:0,24:24:72.25:1174,72,0	0/0:23,0:23:69.24:0,69,1387	1/1:0,42:42:99:1712,105,0	0/0:26,0:26:75.21:0,75,1392	0/0:20,0:20:60.21:0,60,1200	0/0:5,0:5:12.04:0,12,229	0/0:51,0:51:99:0,153,2835	0/0:10,0:10:30.10:0,30,591	0/0:16,0:16:42.13:0,42,808	0/0:28,0:28:84.28:0,84,1609	0/0:22,0:22:66.23:0,66,1309	0/0:23,0:23:69.24:0,69,1377	0/0:24,0:24:72.18:0,72,1348	0/0:3,0:3:9.03:0,9,181
chr10	92173546	.	T	TTAA	6184.30	PASS	AB=0.529;AC=49;AF=0.875;AN=56;BaseQRankSum=2.067;DP=300;FS=3.516;HRun=0;HaplotypeScore=68.0449;InbreedingCoeff=0.4839;MQ=58.52;MQ0=16;MQRankSum=-5.622;QD=33.07;ReadPosRankSum=0.734;VQSLOD=5.0889;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.20:0,63,1100	1/1:4,0:4:12.03:174,12,0	0/0:49,0:13:14.44:0,14,179	0/0:41,0:7:1.25:0,1,81	1/1:4,8:13:20.85:274,21,0	1/1:9,1:10:30.10:478,30,0	1/1:5,0:5:8.89:152,9,0	1/1:12,0:11:33.10:553,33,0	1/1:3,0:3:9.03:177,9,0	1/1:16,0:16:44.75:601,45,0	1/1:6,0:6:18.06:291,18,0	1/1:1,3:4:3.01:60,3,0	1/1:5,0:5:15.05:231,15,0	1/1:2,0:2:6.02:97,6,0	1/1:7,0:7:6.02:86,6,0	1/1:10,0:10:21:302,21,0	1/1:12,0:12:27.09:433,27,0	1/1:3,13:17:6.02:119,6,0	1/1:6,12:14:42.11:720,42,0	0/1:1,7:9:10.14:237,0,10	1/1:3,0:3:9:106,9,0	1/1:0,1:1:3.01:56,3,0	1/1:1,0:1:3.01:40,3,0	1/1:4,0:4:12:138,12,0	1/1:2,4:4:3.01:40,3,0	1/1:6,0:6:18.06:299,18,0	1/1:8,0:8:21.04:317,21,0	1/1:5,0:5:15.04:203,15,0
chr10	92173547	.	AAAT	A	550.81	PASS	AB=0.925;AC=9;AF=0.161;AN=56;BaseQRankSum=0.513;DP=310;FS=0.727;HRun=0;HaplotypeScore=77.9860;InbreedingCoeff=0.1602;MQ=58.33;MQ0=16;MQRankSum=-0.070;QD=4.02;ReadPosRankSum=-1.743;VQSLOD=1.7692;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.06:0,63,1072	0/0:4,0:4:8.25:0,8,58	0/1:48,0:13:30.61:31,0,151	0/1:41,0:7:0.78:1,0,49	0/1:14,0:14:10.58:11,0,91	1/1:8,2:10:30:340,30,0	0/1:2,3:5:14.18:71,0,14	0/0:12,0:11:25.85:0,26,204	0/0:3,0:3:8.92:0,9,62	0/0:17,0:17:39.35:0,39,349	0/0:7,0:7:16.73:0,17,131	0/0:5,0:5:5.99:0,6,49	0/0:5,0:5:15:0,15,146	0/0:2,0:2:5.97:0,6,45	0/0:8,0:8:1.77:0,2,4	1/1:4,6:10:1.04:221,1,0	0/0:12,0:12:6.67:0,7,202	0/0:17,0:17:5.97:0,6,47	0/0:19,0:15:39.88:0,40,308	0/0:9,0:9:14.15:0,14,127	0/0:3,0:3:4.86:0,5,44	0/0:1,0:1:3:0,3,26	0/0:1,0:1:2.99:0,3,23	0/0:4,0:4:3.31:0,3,52	0/0:6,0:4:2.99:0,3,23	0/0:6,0:6:14.21:0,14,105	0/1:8,0:8:0.99:1,0,88	0/0:9,0:9:20.77:0,21,179
chr10	92173550	.	T	TA	363.65	PASS	AB=0.905;AC=9;AF=0.161;AN=56;BaseQRankSum=1.590;DP=332;FS=4.574;HRun=11;HaplotypeScore=78.2486;InbreedingCoeff=0.2607;MQ=61.29;MQ0=14;MQRankSum=-3.179;QD=3.16;ReadPosRankSum=1.333;VQSLOD=-0.0059;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:22:52.78:0,53,397	0/0:4,0:4:11.94:0,12,89	0/1:54,0:15:0.06:0,0,84	0/0:40,0:7:7.04:0,7,36	0/1:14,0:14:7.99:8,0,86	1/1:3,8:11:29.27:273,29,0	0/1:4,1:5:14.04:49,0,14	0/0:13,0:14:32.75:0,33,242	0/0:4,0:4:8.93:0,9,66	0/0:19,0:19:54.67:0,55,415	0/0:8,0:8:22.91:0,23,162	0/0:5,0:5:5.97:0,6,45	0/0:5,0:5:14.90:0,15,110	0/0:3,0:3:8.94:0,9,66	1/1:0,0:9:1.77:4,2,0	0/1:7,3:10:2.15:149,0,2	0/1:11,1:12:0.63:1,0,172	0/0:18,0:18:5.90:0,6,40	0/0:21,0:18:40.19:0,40,306	0/0:10,0:10:20.76:0,21,142	0/0:4,0:4:8.65:0,9,52	0/0:1,0:1:2.94:0,3,18	0/0:1,0:1:2.99:0,3,23	0/0:5,0:5:8.36:0,8,64	0/0:6,0:4:2.99:0,3,23	0/0:8,0:8:17.75:0,18,125	0/0:8,0:8:18.46:0,18,134	0/0:10,0:10:25.94:0,26,190
chr10	92177318	.	G	GGAGGGGT	558.52	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.641;DP=720;FS=6.525;HRun=0;HaplotypeScore=180.8254;InbreedingCoeff=0.9772;MQ=71.00;MQ0=0;MQRankSum=-1.583;QD=23.27;ReadPosRankSum=-4.183;VQSLOD=2.1251;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:96.27:0,96,2184	0/0:11,0:11:33.09:0,33,673	0/0:14,0:13:23.95:0,24,323	0/0:9,0:8:20.74:0,21,226	0/0:22,0:22:63.15:0,63,1267	0/0:13,0:13:33.10:0,33,765	0/0:35,0:35:81.23:0,81,1775	1/1:14,8:24:30.03:653,30,0	0/0:32,0:32:81.26:0,81,1873	0/0:28,0:28:75.23:0,75,1645	0/0:15,0:15:45.10:0,45,890	0/0:35,0:35:80.96:0,81,1670	0/0:26,0:26:66.17:0,66,1343	0/0:39,0:39:99:0,105,2354	0/0:30,0:30:78.22:0,78,1634	0/0:37,0:37:99:0,105,2464	0/0:35,0:35:90.22:0,90,1986	0/0:23,0:23:60.17:0,60,1327	0/0:24,0:24:46.23:0,46,1034	0/0:25,0:25:71.86:0,72,1512	0/0:46,0:46:99:0,114,2349	0/0:32,0:32:87.25:0,87,1949	0/0:23,0:23:60.17:0,60,1297	0/0:22,0:22:63.22:0,63,1552	0/0:29,0:29:75.24:0,75,1733	0/0:24,0:24:69.21:0,69,1544	0/0:23,0:23:57.12:0,57,1087	0/0:5,0:5:15.02:0,15,271
chr10	92178233	.	A	AAAGG	5002.62	PASS	AC=16;AF=0.308;AN=52;BaseQRankSum=-11.123;DP=690;FS=2.935;HRun=0;HaplotypeScore=150.1463;InbreedingCoeff=0.9476;MQ=65.24;MQ0=7;MQRankSum=2.532;QD=25.27;ReadPosRankSum=0.681;VQSLOD=4.9607;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:41:69.12:0,69,986	1/1:4,5:9:12.04:281,12,0	./.	./.	1/1:8,10:18:30.06:640,30,0	0/0:22,0:22:20.01:0,20,62	0/0:35,0:35:23.22:0,23,69	1/1:36,0:34:15.89:131,16,0	1/1:10,19:28:39.13:907,39,0	0/0:28,0:28:35.79:0,36,334	0/0:19,0:19:17.99:0,18,167	0/0:31,0:31:40.60:0,41,384	0/0:29,0:29:39.03:0,39,360	0/0:21,0:21:42.05:0,42,391	1/1:17,16:34:33.11:773,33,0	0/0:26,0:26:11.20:0,11,53	1/1:14,14:28:37.37:846,37,0	0/0:26,0:26:36.04:0,36,333	0/0:14,0:14:18.06:0,18,277	0/0:20,0:20:27.08:0,27,395	0/0:19,0:19:36.10:0,36,532	0/0:22,0:22:24.01:0,24,218	0/0:20,0:20:17.96:0,18,155	0/0:23,0:23:24.03:0,24,223	0/0:33,0:33:48.04:0,48,442	1/1:16,21:37:19.97:1354,20,0	0/0:25,0:26:26.41:0,26,555	1/1:4,3:7:3.01:70,3,0
chr10	92178276	.	GGAGGA	G	11585.11	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=3.598;DP=707;FS=4.332;HRun=0;HaplotypeScore=156.8329;InbreedingCoeff=0.7778;MQ=66.05;MQ0=3;MQRankSum=-1.449;QD=36.20;ReadPosRankSum=5.416;VQSLOD=4.5554;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,3237	0/0:13,0:13:39.13:0,39,935	0/0:18,0:15:42.14:0,42,918	0/0:25,0:19:46.86:0,47,942	0/0:29,0:29:87.24:0,87,1971	0/1:19,0:19:39.65:436,0,40	0/1:28,0:29:30.10:691,0,30	0/0:33,0:32:92.86:0,93,1501	0/0:24,0:23:48.16:0,48,1288	1/1:1,26:27:81.28:1690,81,0	1/1:0,17:17:45.09:883,45,0	1/1:0,35:35:45.15:1037,45,0	1/1:1,24:25:41.61:948,42,0	1/1:0,25:25:42.14:978,42,0	0/0:34,0:34:84.29:0,84,2041	0/1:26,0:26:99:608,0,118	0/0:29,0:29:84.25:0,84,1932	1/1:0,19:19:36.12:837,36,0	0/0:24,0:23:69.24:0,69,1771	0/0:17,0:17:51.17:0,51,1439	0/0:34,0:34:96.31:0,96,2463	1/1:1,24:25:66.23:1327,66,0	1/1:1,21:21:21.07:474,21,0	1/1:0,20:20:24.08:559,24,0	1/1:2,29:29:48.16:1117,48,0	0/0:30,0:30:80.56:0,81,2021	0/0:22,0:22:52.48:0,52,1710	0/0:15,0:15:39.13:0,39,886
chr10	92178280	.	GA	G	4816.64	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=13.129;DP=713;FS=6.471;HRun=3;HaplotypeScore=135.7898;InbreedingCoeff=0.9984;MQ=67.88;MQ0=2;MQRankSum=-1.112;QD=15.10;ReadPosRankSum=6.403;VQSLOD=3.9793;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,1644	0/0:14,0:14:42.11:0,42,575	0/0:25,0:22:57.18:0,57,786	0/0:26,0:20:50.38:0,50,675	0/0:27,0:27:81.26:0,81,1141	1/1:0,19:19:54.16:639,54,0	1/1:1,28:29:69.52:867,70,0	0/0:31,0:30:84.58:0,85,1095	0/0:24,0:23:54.17:0,54,750	1/1:27,0:27:76.40:600,76,0	1/1:17,0:17:39.74:358,40,0	1/1:35,0:35:38.09:151,38,0	1/1:25,0:25:37.19:165,37,0	1/1:25,0:25:36.76:147,37,0	0/0:33,0:33:84.28:0,84,1203	1/1:2,23:25:66.20:797,66,0	0/0:30,0:30:86.84:0,87,1158	1/1:19,0:19:31.68:130,32,0	0/0:25,0:25:75.24:0,75,1049	0/0:17,0:17:51.17:0,51,731	0/0:33,0:33:93.31:0,93,1337	1/1:25,0:25:63.51:600,64,0	1/1:22,0:21:19.01:110,19,0	1/1:20,0:20:20.85:82,21,0	1/1:31,0:29:42.03:170,42,0	0/0:29,0:29:53.46:0,53,1072	0/0:24,0:24:65:0,65,873	0/0:15,0:15:39.13:0,39,560
chr10	92179375	.	CAGACACACAG	C	2232.77	PASS	AB=1.000;AC=4;AF=0.074;AN=54;BaseQRankSum=4.550;DP=760;FS=24.244;HRun=0;HaplotypeScore=243.3329;InbreedingCoeff=0.4257;MQ=62.09;MQ0=28;MQRankSum=-5.660;QD=31.01;ReadPosRankSum=-5.769;VQSLOD=1.0286;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,115,4298	0/0:17,0:17:24.36:0,24,1897	0/0:36,0:20:59.91:0,60,2080	0/0:64,0:26:53.97:0,54,2024	./.	0/0:23,0:22:42.60:0,43,1554	0/0:24,0:24:56.66:0,57,1842	1/1:3,36:41:99:2299,120,0	0/0:13,0:13:11.85:0,12,198	0/0:35,0:35:26.93:0,27,2451	0/0:19,0:18:36.10:0,36,1257	0/0:31,0:31:69.14:0,69,2497	0/0:23,0:23:31.24:0,31,1573	0/0:23,0:23:33.92:0,34,1445	0/0:34,0:34:66.46:0,66,3104	0/0:30,0:30:18.82:0,19,264	0/0:34,0:34:81.94:0,82,3503	0/0:12,0:11:30.10:0,30,1107	0/1:12,0:12:33.94:34,0,198	0/0:28,0:28:29.62:0,30,272	0/0:36,0:34:21.48:0,21,307	0/0:26,0:26:63.13:0,63,2160	0/0:16,0:15:39.10:0,39,1308	0/0:38,0:37:29.78:0,30,812	0/0:22,0:21:45.15:0,45,1643	0/0:28,0:28:41.29:0,41,886	0/1:18,0:16:13.24:13,0,345	0/0:8,0:8:5.98:0,6,46
chr10	92179383	.	CAG	C	2957.88	PASS	AB=0.997;AC=29;AF=0.537;AN=54;BaseQRankSum=9.040;DP=707;FS=42.695;HRun=0;HaplotypeScore=154.5320;InbreedingCoeff=0.2466;MQ=57.32;MQ0=30;MQRankSum=-5.797;QD=6.62;ReadPosRankSum=-0.593;VQSLOD=1.6069;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:42:8.05:8,0,950	0/0:17,0:17:7.63:0,8,479	0/0:32,0:16:43.34:0,43,602	0/0:54,0:16:32.89:0,33,481	./.	1/1:25,0:23:0.14:1,0,0	0/1:25,0:25:12.27:25,0,12	1/1:40,2:41:88.01:906,88,0	1/1:3,11:14:9.03:105,9,0	0/1:32,1:33:47.66:57,0,48	0/1:17,0:16:22.37:22,0,22	0/1:27,0:27:4.87:5,0,29	0/1:23,0:22:30.67:34,0,31	0/1:23,0:23:21.25:26,0,21	0/0:33,0:33:47.34:0,47,770	1/1:28,0:28:2.65:20,3,0	0/0:30,0:30:29.44:0,29,878	0/1:13,0:11:16.37:16,0,64	1/1:1,5:6:18:208,18,0	1/1:2,27:29:15.04:175,15,0	1/1:5,27:30:2.75:40,3,0	0/0:22,1:23:8.25:0,8,41	0/1:17,0:16:4.71:22,0,5	0/0:33,0:31:11.37:0,11,87	0/0:21,0:20:7.28:0,7,37	1/1:17,9:26:68.48:871,68,0	1/1:10,7:15:41.96:522,42,0	1/1:0,8:8:6.02:74,6,0
chr10	92179385	.	GAC	G	4508.12	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=4.733;DP=691;FS=0.408;HRun=0;HaplotypeScore=148.4091;InbreedingCoeff=0.6263;MQ=57.30;MQ0=28;MQRankSum=-0.769;QD=9.51;ReadPosRankSum=1.685;VQSLOD=4.7503;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:72.44:0,72,668	0/0:15,0:15:35.41:0,35,259	0/0:28,0:15:30:0,30,291	0/0:51,0:15:26.93:0,27,260	0/0:19,0:19:2.98:0,3,22	1/1:23,1:22:35.70:299,36,0	1/1:24,0:24:46.08:367,46,0	1/1:42,0:41:76.61:371,77,0	1/1:15,0:15:8.81:53,9,0	1/1:4,26:30:68.69:525,69,0	1/1:16,0:15:29.60:225,30,0	1/1:27,0:27:52.11:435,52,0	1/1:24,0:23:20.43:212,20,0	1/1:23,0:23:8.47:215,8,0	0/0:33,0:33:56.57:0,57,378	1/1:28,0:28:10.78:77,11,0	0/0:29,0:29:57.67:0,58,637	0/1:12,0:10:0.03:128,0,0	0/1:8,0:8:9.60:54,0,10	0/1:29,0:29:1.36:70,0,1	0/1:31,0:29:10.10:10,0,13	1/1:21,0:21:32.78:331,33,0	1/1:15,1:15:23.81:221,24,0	0/1:33,0:31:8.16:16,0,8	1/1:19,0:18:24.05:263,24,0	1/1:27,0:27:45.10:376,45,0	1/1:17,0:15:34.87:226,35,0	1/1:8,0:8:5.84:35,6,0
chr10	92179386	.	A	ACT	6213.73	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-1.273;DP=700;FS=1.868;HRun=0;HaplotypeScore=148.3944;InbreedingCoeff=0.5902;MQ=55.92;MQ0=29;MQRankSum=-2.723;QD=13.99;ReadPosRankSum=-0.977;VQSLOD=4.7680;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:87.18:0,87,1137	0/0:15,0:15:41.75:0,42,487	0/0:27,0:14:34.72:0,35,435	0/0:49,0:13:27.06:0,27,367	0/1:21,0:21:0:0,0,0	0/1:24,0:22:0.20:0,0,0	0/0:22,0:23:3.43:0,3,9	1/1:43,0:42:73.37:496,73,0	1/1:15,0:15:6.41:41,6,0	1/1:29,0:29:41.08:917,41,0	1/1:16,0:15:30.06:407,30,0	1/1:24,2:26:54.36:841,54,0	1/1:20,3:23:35.43:595,35,0	1/1:21,2:23:41.20:553,41,0	0/0:33,0:33:60.66:0,61,879	0/0:0,0:28:2.12:0,2,34	0/0:30,0:30:69.50:0,69,920	1/1:10,2:10:30.10:465,30,0	0/1:11,0:11:5.13:5,0,42	1/1:30,0:30:0.67:16,1,0	1/1:34,0:30:3.01:32,3,0	1/1:22,0:22:43.64:603,44,0	1/1:17,0:16:35.33:480,35,0	1/1:6,28:33:6.83:111,7,0	1/1:19,0:18:35.86:552,36,0	0/1:26,0:26:44.98:79,0,45	0/1:17,0:15:20.19:21,0,20	0/0:8,0:8:2.44:0,2,5
chr10	92179388	.	ACTCT	A	532.43	PASS	AB=0.898;AC=10;AF=0.208;AN=48;BaseQRankSum=1.830;DP=748;FS=0.000;HRun=0;HaplotypeScore=189.3511;InbreedingCoeff=0.5398;MQ=53.33;MQ0=33;MQRankSum=0.303;QD=3.50;ReadPosRankSum=1.455;VQSLOD=2.4356;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:42:47.87:0,48,794	1/1:11,4:15:8.56:105,9,0	./.	./.	0/0:22,0:22:9.03:0,9,193	0/1:19,2:22:0:0,0,0	1/1:23,0:23:7.37:71,7,0	./.	0/0:18,0:18:5.94:0,6,43	0/0:32,0:32:9.46:0,9,145	0/0:18,0:17:3.01:0,3,36	0/0:31,0:31:6.75:0,7,139	0/0:25,0:24:16.32:0,16,194	0/0:25,0:24:12.04:0,12,225	1/1:16,15:32:27.46:370,27,0	1/1:28,0:28:11.20:75,11,0	0/1:29,1:29:52.01:52,0,659	0/0:12,0:10:9.03:0,9,139	0/0:18,0:17:18.06:0,18,337	0/0:29,0:29:6.02:0,6,131	0/0:40,0:35:12.04:0,12,228	0/0:22,0:21:2.94:0,3,18	0/0:19,0:18:6.02:0,6,102	0/0:38,0:36:5.95:0,6,81	0/0:23,0:22:2.99:0,3,24	0/0:35,0:35:39.57:0,40,626	0/0:23,0:21:18.06:0,18,291	./.
chr10	92180079	.	A	AAAAC	12934.89	PASS	AB=0.679;AC=39;AF=0.722;AN=54;BaseQRankSum=-11.193;DP=556;FS=16.012;HRun=0;HaplotypeScore=106.5200;InbreedingCoeff=0.6501;MQ=62.63;MQ0=12;MQRankSum=-2.408;QD=33.51;ReadPosRankSum=1.150;VQSLOD=3.8842;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:66.08:0,66,981	0/0:8,0:8:18.05:0,18,282	0/0:47,0:16:7.01:0,7,203	0/0:50,0:26:16.88:0,17,175	1/1:7,9:20:4.64:476,5,0	1/1:5,10:17:21.02:461,21,0	1/1:2,8:12:10.14:431,10,0	1/1:14,7:22:10.82:694,11,0	0/1:3,3:7:7.95:69,0,8	1/1:12,14:28:40.22:1171,40,0	1/1:8,9:15:5.36:408,5,0	1/1:9,10:20:38.15:812,38,0	1/1:6,3:10:14.87:366,15,0	1/1:5,8:14:10.11:503,10,0	0/0:9,0:8:24.03:0,24,356	1/1:12,10:20:3.98:638,4,0	0/0:22,0:21:49.13:0,49,798	1/1:6,6:12:15.05:370,15,0	1/1:14,8:22:17.83:540,18,0	1/1:9,18:27:51.85:1286,52,0	1/1:0,3:3:9.03:214,9,0	1/1:0,5:8:15.05:359,15,0	1/1:6,12:22:20.17:821,20,0	./.	1/1:4,16:21:47.85:1153,48,0	0/1:12,10:24:0.59:681,0,1	1/1:5,14:20:31.05:930,31,0	0/1:14,8:20:47.72:550,0,48
chr10	92180087	.	C	CAAAA	8949.07	PASS	AB=0.990;AC=33;AF=0.589;AN=56;BaseQRankSum=5.786;DP=533;FS=18.196;HRun=8;HaplotypeScore=113.3163;InbreedingCoeff=0.0471;MQ=76.54;MQ0=7;MQRankSum=-6.478;QD=19.25;ReadPosRankSum=6.782;VQSLOD=0.9770;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.10:0,72,966	0/0:8,0:8:21.06:0,21,295	0/1:57,0:22:10.92:11,0,197	0/1:55,0:37:47.51:48,0,142	0/1:19,0:19:10.72:354,0,11	0/1:16,0:16:2.43:314,0,2	1/1:14,0:13:18.06:321,18,0	0/1:27,0:24:91.09:366,0,91	1/1:6,0:6:5.05:56,5,0	0/1:22,0:22:4.51:691,0,5	1/1:14,0:12:18.06:312,18,0	0/1:17,1:17:6.67:591,0,7	1/1:8,0:8:15.05:282,15,0	1/1:11,0:11:6.09:371,6,0	0/0:10,0:10:24.03:0,24,320	1/1:20,0:16:28.34:484,28,0	0/0:21,0:21:57.16:0,57,802	0/1:8,0:8:8.27:245,0,8	0/1:21,0:22:99:217,0,102	1/1:25,1:25:34.53:958,35,0	1/1:3,0:3:9.03:150,9,0	0/1:10,0:10:41.83:251,0,42	0/1:23,0:23:5.68:595,0,6	0/0:3,0:2:2.70:0,3,24	0/1:22,0:22:15.54:816,0,16	1/1:19,1:20:6.75:415,7,0	1/1:20,1:20:19.26:712,19,0	0/1:19,0:17:11.58:390,0,12
chr10	92180848	.	AGGTCTCTGAAACTGGC	A	1901.25	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.726;DP=548;FS=8.712;HRun=0;HaplotypeScore=238.4848;InbreedingCoeff=0.9911;MQ=89.00;MQ0=0;MQRankSum=-4.006;QD=63.38;ReadPosRankSum=-1.213;VQSLOD=1.9722;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.31:0,96,6682	0/0:16,0:16:48.15:0,48,3115	0/0:20,0:20:54.14:0,54,2214	0/0:31,0:31:87.26:0,87,3747	0/0:16,0:16:48.16:0,48,3602	0/0:22,0:22:66.21:0,66,4935	0/0:26,0:26:78.27:0,78,5396	1/1:13,17:30:51.13:1996,51,0	0/0:15,0:15:42.14:0,42,3208	0/0:24,0:24:66.23:0,66,4802	0/0:16,0:16:42.14:0,42,3068	0/0:25,0:25:75.24:0,75,5114	0/0:15,0:15:45.15:0,45,3125	0/0:16,0:16:48.15:0,48,3505	0/0:20,0:20:60.16:0,60,4318	0/0:17,0:17:51.16:0,51,3192	0/0:30,0:30:90.31:0,90,6153	0/0:18,0:18:54.19:0,54,4108	0/0:14,0:14:39.13:0,39,2624	0/0:14,0:14:39.13:0,39,2865	0/0:16,0:16:48.16:0,48,3657	0/0:7,0:7:18.06:0,18,1429	0/0:10,0:10:30.10:0,30,2194	0/0:30,0:30:90.31:0,90,6995	0/0:15,0:15:45.15:0,45,3101	0/0:18,0:18:48.16:0,48,3320	0/0:24,0:24:72.25:0,72,5663	0/0:11,0:11:33.11:0,33,2509
chr10	92181105	.	TG	T	7991.15	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=9.832;DP=561;FS=0.663;HRun=1;HaplotypeScore=70.2975;InbreedingCoeff=0.9886;MQ=81.84;MQ0=0;MQRankSum=0.503;QD=40.36;ReadPosRankSum=2.219;VQSLOD=5.5269;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.31:0,90,1439	0/0:9,0:9:27.09:0,27,432	0/0:15,0:15:28.56:0,29,576	0/0:16,0:16:45.14:0,45,638	0/0:31,0:31:93.32:0,93,1481	0/0:27,0:27:81.28:0,81,1295	0/0:11,0:11:33.10:0,33,504	0/0:27,0:27:81.27:0,81,1275	0/0:22,0:22:66.23:0,66,1052	1/1:0,37:37:99:1532,111,0	1/1:0,21:21:60.20:839,60,0	1/1:0,22:22:63.21:881,63,0	1/1:0,16:16:45.15:626,45,0	1/1:1,20:21:60.20:839,60,0	0/0:29,0:29:87.30:0,87,1391	0/0:20,0:20:60.20:0,60,957	0/0:19,0:19:57.19:0,57,911	1/1:0,25:25:72.24:1007,72,0	0/0:15,0:15:45.15:0,45,718	0/0:17,0:17:51.17:0,51,815	0/0:3,0:3:9.03:0,9,144	1/1:0,15:15:45.15:630,45,0	1/1:0,20:20:57.19:797,57,0	1/1:0,9:9:24.08:336,24,0	1/1:0,12:12:36.12:504,36,0	0/0:31,2:33:15.38:0,15,1381	0/0:24,0:24:72.25:0,72,1151	0/0:15,0:15:45.15:0,45,699
chr10	92181902	.	C	CA	1285.94	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.732;DP=693;FS=10.082;HRun=0;HaplotypeScore=70.5757;InbreedingCoeff=0.9894;MQ=81.10;MQ0=0;MQRankSum=-1.017;QD=42.86;ReadPosRankSum=-4.011;VQSLOD=1.8281;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,147,1989	0/0:11,0:11:33.08:0,33,440	0/0:21,0:21:48.13:0,48,695	0/0:19,0:18:41.50:0,42,551	0/0:16,0:16:36.12:0,36,501	0/0:22,0:22:66.22:0,66,922	0/0:26,0:26:75.18:0,75,1006	1/1:0,30:30:87.30:1381,87,0	0/0:21,0:21:63.21:0,63,880	0/0:30,0:30:87.26:0,87,1194	0/0:11,0:11:33.11:0,33,454	0/0:27,0:27:78.25:0,78,1073	0/0:34,0:34:99:0,102,1380	0/0:34,0:34:99:0,99,1368	0/0:24,0:24:72.22:0,72,969	0/0:22,0:22:63.21:0,63,880	0/0:31,0:31:93.26:0,93,1272	0/0:26,0:26:78.17:0,78,1046	0/0:29,0:29:87.23:0,87,1158	0/0:15,0:15:42.14:0,42,587	0/0:51,0:51:99:0,153,2094	0/0:28,0:28:78.13:0,78,1007	0/0:10,0:10:24.07:0,24,318	0/0:40,0:40:99:0,120,1674	0/0:15,0:15:45.08:0,45,585	0/0:23,0:23:65.88:0,66,874	0/0:18,0:18:54.18:0,54,741	0/0:7,0:7:18.06:0,18,251
chr10	92182450	.	C	CAAACA	1024.07	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.439;DP=560;FS=41.150;HRun=0;HaplotypeScore=104.1311;InbreedingCoeff=0.8318;MQ=60.61;MQ0=1;MQRankSum=-6.271;QD=44.52;ReadPosRankSum=-5.153;VQSLOD=1.2642;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:81.25:0,81,1645	0/0:9,0:9:27.08:0,27,503	0/0:15,0:14:2.22:0,2,510	0/0:14,0:13:24.33:0,24,446	0/0:39,0:39:99:0,111,2255	0/0:15,0:15:45.15:0,45,922	0/0:20,0:20:51.09:0,51,1010	1/1:3,15:22:31.20:1118,31,0	0/0:20,0:19:60.19:0,60,1169	0/0:21,0:21:54.16:0,54,1006	0/0:28,0:28:75.22:0,75,1482	0/0:20,0:20:57.11:0,57,1055	0/0:13,0:13:36.11:0,36,692	0/0:20,0:20:57.17:0,57,1068	0/0:23,0:23:66.20:0,66,1256	0/0:21,0:21:63.21:0,63,1292	0/0:34,0:34:87.20:0,87,1621	0/0:18,0:18:51.14:0,51,940	0/0:22,0:21:60.18:0,60,1100	0/0:20,0:20:54.17:0,54,1068	0/0:15,0:15:39.13:0,39,795	0/0:11,0:11:29.44:0,29,522	0/0:21,0:21:54.14:0,54,1059	0/0:14,0:14:36.05:0,36,680	0/0:19,0:19:57.19:0,57,1177	0/0:21,0:21:57.19:0,57,1177	0/0:20,0:19:57.20:0,57,1210	0/0:12,0:12:33.11:0,33,683
chr10	92182467	.	A	AC	131.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.661;DP=544;FS=6.037;HRun=6;HaplotypeScore=61.0102;InbreedingCoeff=0.9818;MQ=62.71;MQ0=0;MQRankSum=-3.275;QD=5.99;ReadPosRankSum=-2.343;VQSLOD=-0.6045;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:84.16:0,84,846	0/0:8,0:8:21.05:0,21,214	0/0:15,0:14:23.71:0,24,210	0/0:18,0:17:33.81:0,34,252	0/0:36,0:36:96.20:0,96,969	0/0:15,0:15:42.10:0,42,428	0/0:25,0:25:63.14:0,63,640	1/1:12,10:21:21.02:224,21,0	0/0:13,0:13:39.09:0,39,398	0/0:20,0:20:54.10:0,54,540	0/0:23,0:23:69.14:0,69,697	0/0:19,0:19:42.09:0,42,428	0/0:11,0:11:27.05:0,27,275	0/0:19,0:19:51.11:0,51,520	0/0:16,0:16:36.08:0,36,367	0/0:21,0:21:60.12:0,60,604	0/0:37,0:37:81.17:0,81,825	0/0:22,0:22:63.14:0,63,641	0/0:21,0:21:51.11:0,51,519	0/0:22,0:22:57.11:0,57,574	0/0:17,0:17:36.07:0,36,366	0/0:8,0:8:21.03:0,21,207	0/0:19,0:19:48.11:0,48,488	0/0:15,0:15:39.07:0,39,388	0/0:16,0:16:33.04:0,33,328	0/0:20,0:20:54.11:0,54,547	0/0:19,0:18:48.10:0,48,489	0/0:9,0:9:24.05:0,24,244
chr10	92182614	.	CT	C	185.16	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=3.788;DP=510;FS=5.709;HRun=12;HaplotypeScore=57.0340;InbreedingCoeff=0.7258;MQ=57.37;MQ0=10;MQRankSum=-4.351;QD=6.38;ReadPosRankSum=-1.318;VQSLOD=1.5147;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:99:0,120,1477	0/0:9,0:9:27.09:0,27,366	0/0:6,0:4:5.88:0,6,36	0/1:7,0:4:2.07:2,0,7	0/0:13,0:13:29.70:0,30,352	0/0:19,0:19:54.17:0,54,713	0/0:18,0:18:45.15:0,45,597	1/1:14,8:18:32.44:279,32,0	0/0:10,0:10:27.03:0,27,332	0/0:13,0:12:30.94:0,31,344	0/0:15,0:15:39.10:0,39,469	0/0:19,0:19:48.14:0,48,615	0/0:15,0:15:45.05:0,45,549	0/0:21,0:21:59.70:0,60,699	0/0:13,0:13:29.68:0,30,371	0/0:16,0:16:45.15:0,45,614	0/0:29,0:29:84.27:0,84,1127	0/0:29,0:28:73.71:0,74,948	0/0:28,0:27:74.89:0,75,962	0/0:15,0:14:32.44:0,32,384	0/0:13,0:13:39.03:0,39,491	0/0:10,0:10:25.24:0,25,261	0/0:13,0:13:28.87:0,29,343	0/0:30,1:31:50.01:0,50,1001	0/0:20,0:20:54.14:0,54,673	0/0:18,0:17:49.01:0,49,624	0/0:23,0:23:57.17:0,57,749	0/0:17,0:16:39.13:0,39,525
chr10	92183004	.	GGT	G	945.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.928;DP=603;FS=0.789;HRun=0;HaplotypeScore=72.7218;InbreedingCoeff=0.9380;MQ=86.44;MQ0=0;MQRankSum=0.138;QD=41.09;ReadPosRankSum=-3.507;VQSLOD=4.3849;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,2029	0/0:8,0:8:24.05:0,24,423	0/0:16,0:16:47.67:0,48,770	0/0:24,0:24:44.90:0,45,1006	0/0:10,0:10:30.10:0,30,608	0/0:23,0:23:69.24:0,69,1399	0/0:33,0:33:99:0,99,1955	1/1:0,23:23:69.19:1040,69,0	0/0:13,0:13:39.12:0,39,755	0/0:10,0:10:30.09:0,30,575	0/0:7,0:7:21.07:0,21,411	0/0:26,0:26:75.24:0,75,1486	0/0:32,0:32:96.31:0,96,1896	0/0:31,0:31:93.32:0,93,1880	0/0:33,0:33:99:0,99,1976	0/0:22,0:22:66.21:0,66,1304	0/0:26,0:26:78.25:0,78,1535	0/0:35,0:35:99:0,105,2075	0/0:20,0:20:60.20:0,60,1171	0/0:17,0:17:45.15:0,45,902	0/0:45,0:45:99:0,135,2701	0/0:9,0:9:27.09:0,27,544	0/0:16,0:16:42.14:0,42,852	0/0:29,0:29:87.29:0,87,1691	0/0:18,0:18:54.17:0,54,1051	0/0:21,0:21:60.20:0,60,1185	0/0:18,0:18:54.19:0,54,1092	0/0:3,0:3:9.03:0,9,183
chr10	92183338	.	G	GA	1370.73	PASS	AB=0.841;AC=20;AF=0.357;AN=56;BaseQRankSum=-0.231;DP=479;FS=2.312;HRun=13;HaplotypeScore=70.0390;InbreedingCoeff=0.5820;MQ=56.72;MQ0=8;MQRankSum=-1.692;QD=7.70;ReadPosRankSum=-3.656;VQSLOD=1.9125;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:32:48.42:0,48,320	0/0:3,0:4:7.92:0,8,45	0/1:10,0:4:0:0,0,0	0/0:6,0:5:5.46:0,5,28	1/1:3,8:11:21.02:195,21,0	0/0:13,0:18:11.76:0,12,163	0/0:13,0:13:23.71:0,24,164	1/1:28,0:23:28.64:152,29,0	1/1:6,10:16:0.91:148,1,0	0/0:13,0:12:23.77:0,24,163	0/1:8,1:9:18.47:18,0,33	0/0:19,0:20:39.65:0,40,258	0/0:20,1:22:31.66:0,32,209	0/0:17,0:17:26.54:0,27,181	0/0:21,0:21:35.52:0,36,246	0/0:19,1:21:18.73:0,19,266	0/0:35,0:37:56.05:0,56,479	0/0:17,0:19:45.64:0,46,293	1/1:5,10:15:6.40:172,6,0	1/1:5,8:13:3.44:174,3,0	0/1:6,10:19:21.45:173,0,21	0/0:12,0:12:26.70:0,27,183	0/0:12,0:12:20.76:0,21,143	0/0:30,0:32:59.11:0,59,485	0/1:7,2:9:10:10,0,85	1/1:9,13:22:32.70:278,33,0	1/1:4,10:14:0.44:147,0,0	1/1:7,3:7:9.01:84,9,0
chr10	92183790	.	TA	T	2300.44	PASS	AB=0.747;AC=37;AF=0.661;AN=56;BaseQRankSum=6.442;DP=344;FS=10.960;HRun=14;HaplotypeScore=47.3657;InbreedingCoeff=0.5552;MQ=80.04;MQ0=2;MQRankSum=-0.785;QD=8.95;ReadPosRankSum=1.982;VQSLOD=1.8059;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:20:38.81:0,39,332	0/0:6,0:6:15.01:0,15,136	0/1:18,0:13:2.26:2,0,78	0/1:12,0:10:26.50:27,0,33	0/1:2,8:12:3:110,0,3	0/0:17,1:18:15.44:0,15,281	0/0:4,0:4:9.01:0,9,84	1/1:7,0:18:20.97:60,21,0	1/1:4,3:7:5.93:41,6,0	1/1:5,4:9:11.87:80,12,0	1/1:3,9:13:28.79:191,29,0	1/1:5,7:13:0.26:68,0,0	1/1:1,5:6:10.95:67,11,0	1/1:2,13:15:32.69:226,33,0	0/0:8,0:8:14.88:0,15,116	0/0:7,0:7:15.01:0,15,135	0/0:23,1:21:30.45:0,30,416	1/1:3,13:15:29.72:206,30,0	1/1:6,10:17:31.09:193,31,0	1/1:4,8:12:23.74:164,24,0	1/1:3,7:10:17.80:123,18,0	1/1:4,1:5:2.96:21,3,0	0/1:3,7:10:10.09:84,0,10	1/1:1,1:2:2.97:21,3,0	1/1:4,12:16:23.75:164,24,0	1/1:3,14:18:40.62:269,41,0	0/1:4,7:12:5.02:106,0,5	1/1:1,14:15:38.68:267,39,0
chr10	92184280	.	GA	G	2343.84	PASS	AB=0.646;AC=19;AF=0.352;AN=54;BaseQRankSum=6.761;DP=542;FS=31.601;HRun=12;HaplotypeScore=71.3424;InbreedingCoeff=0.5635;MQ=54.92;MQ0=11;MQRankSum=1.988;QD=10.95;ReadPosRankSum=1.511;VQSLOD=0.8535;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:81.08:0,81,799	0/1:9,2:12:18.59:19,0,86	./.	0/0:16,0:5:0.64:0,1,26	0/1:7,10:15:0.56:179,0,1	1/1:5,8:13:14.93:115,15,0	1/1:6,15:23:33.91:244,34,0	0/0:14,2:16:0.80:0,1,341	1/1:3,15:18:44.58:336,45,0	0/0:21,0:21:35.93:0,36,341	0/0:15,1:18:3.65:0,4,204	0/0:21,0:21:47.97:0,48,462	0/0:16,1:17:15.81:0,16,326	0/0:12,0:13:26.76:0,27,242	0/0:31,0:31:48.91:0,49,644	1/1:5,13:19:40.86:308,41,0	0/0:25,1:27:48.22:0,48,606	0/0:27,0:28:52.47:0,52,581	0/1:9,8:19:46.69:144,0,47	0/1:2,14:15:0.61:178,0,1	1/1:9,11:19:26.89:209,27,0	0/0:12,1:13:3.82:0,4,219	0/0:22,0:22:42.06:0,42,410	0/0:22,1:24:36.69:0,37,528	0/0:15,1:16:12.85:0,13,307	1/1:7,16:22:35.75:304,36,0	1/1:5,22:27:53.77:418,54,0	0/1:2,4:5:15.49:78,0,15
chr10	92184629	.	AC	A	10403.21	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.956;DP=720;FS=1.221;HRun=2;HaplotypeScore=67.2554;InbreedingCoeff=0.9998;MQ=84.10;MQ0=0;MQRankSum=-2.885;QD=37.02;ReadPosRankSum=3.464;VQSLOD=5.5294;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.26:0,78,1168	0/0:11,0:11:33.11:0,33,493	0/0:21,0:21:63.20:0,63,910	0/0:21,0:21:44.04:0,44,677	1/1:0,26:26:78.19:992,78,0	1/1:0,20:20:60.20:779,60,0	1/1:0,18:18:54.18:701,54,0	0/0:36,0:36:99:0,102,1493	1/1:0,29:29:72.23:934,72,0	0/0:25,0:25:75.25:0,75,1124	0/0:33,0:33:99:0,99,1478	0/0:33,0:33:93.30:0,93,1373	0/0:22,0:22:66.22:0,66,989	0/0:23,0:23:69.21:0,69,991	0/0:37,0:37:99:0,111,1663	1/1:0,35:35:99:1286,99,0	0/0:31,0:31:90.28:0,90,1308	0/0:17,0:17:48.16:0,48,719	1/1:0,9:9:27.09:351,27,0	1/1:0,35:35:99:1285,99,0	1/1:0,33:33:93.30:1208,93,0	0/0:31,0:31:93.31:0,93,1391	0/0:33,0:33:96.19:0,96,1363	0/0:12,0:12:36.12:0,36,531	0/0:27,0:27:78.26:0,78,1165	1/1:0,27:27:81.25:1038,81,0	1/1:0,32:32:96.31:1246,96,0	1/1:0,17:17:45.15:584,45,0
chr10	92184843	.	TTCCCAC	T	932.59	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.898;DP=563;FS=0.000;HRun=0;HaplotypeScore=117.6466;InbreedingCoeff=0.8946;MQ=86.41;MQ0=0;MQRankSum=-0.478;QD=37.30;ReadPosRankSum=-4.001;VQSLOD=2.2210;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.18:0,81,2361	0/0:2,0:2:6.02:0,6,145	0/0:33,0:31:76.07:0,76,1614	0/0:16,0:16:44.95:0,45,1142	0/0:13,0:13:39.05:0,39,1275	0/0:17,0:17:48.16:0,48,1631	0/0:14,0:14:42.14:0,42,1362	1/1:1,24:25:50.42:1027,50,0	0/0:21,0:21:63.22:0,63,2158	0/0:22,0:22:66.20:0,66,2134	0/0:7,0:7:21.07:0,21,785	0/0:32,0:32:96.03:0,96,3220	0/0:26,0:26:78.19:0,78,2631	0/0:21,0:21:63.17:0,63,2080	0/0:33,0:33:99:0,99,3454	0/0:37,0:37:99:0,111,3773	0/0:29,0:29:87.26:0,87,2809	0/0:17,0:17:51.12:0,51,1553	0/0:28,0:27:81.21:0,81,2165	0/0:12,0:12:36.11:0,36,1233	0/0:22,0:22:63.18:0,63,1988	0/0:11,0:11:33.02:0,33,863	0/0:15,0:15:45.11:0,45,1402	0/0:20,0:20:60.19:0,60,2024	0/0:10,0:10:30.10:0,30,1108	0/0:14,0:14:39.13:0,39,1457	0/0:33,0:33:96.27:0,96,3220	0/0:6,0:6:18.05:0,18,570
chr10	92185131	.	T	TTC	135.91	PASS	AC=2;AF=0.040;AN=50;BaseQRankSum=-3.368;DP=92;FS=2.920;HRun=0;HaplotypeScore=13.2956;InbreedingCoeff=0.2285;MQ=116.06;MQ0=0;MQRankSum=-1.624;QD=33.98;ReadPosRankSum=-0.905;VQSLOD=4.3162;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:24.08:0,24,341	0/0:1,0:1:3.01:0,3,43	0/0:10,0:10:20.74:0,21,269	0/0:14,0:14:32.83:0,33,379	0/0:5,0:5:12.04:0,12,172	0/0:4,0:4:12.04:0,12,172	0/0:2,0:2:6.02:0,6,86	1/1:0,4:4:12.04:220,12,0	0/0:2,0:2:6.02:0,6,86	0/0:1,0:1:3:0,3,28	./.	0/0:1,0:1:3.01:0,3,43	0/0:1,0:1:3.01:0,3,43	0/0:3,0:3:6.02:0,6,86	./.	0/0:2,0:2:6.01:0,6,68	0/0:1,0:1:3:0,3,25	0/0:2,0:2:6.01:0,6,68	0/0:4,0:4:9.03:0,9,129	0/0:4,0:4:12.01:0,12,151	0/0:4,0:4:12.04:0,12,172	0/0:2,0:2:6.02:0,6,86	./.	0/0:5,0:5:15.04:0,15,197	0/0:4,0:4:12.04:0,12,172	0/0:2,0:2:6.02:0,6,85	0/0:3,0:2:9.02:0,9,111	0/0:2,0:2:3.01:0,3,43
chr10	92185945	.	TTC	T	2702.58	PASS	AB=0.968;AC=23;AF=0.411;AN=56;BaseQRankSum=0.968;DP=674;FS=36.656;HRun=0;HaplotypeScore=116.2511;InbreedingCoeff=-0.4012;MQ=63.68;MQ0=7;MQRankSum=1.357;QD=5.61;ReadPosRankSum=1.777;VQSLOD=1.6111;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,124,1446	0/0:8,0:8:23.94:0,24,279	0/0:28,0:14:28.97:0,29,325	0/0:21,0:10:14.59:0,15,148	0/1:18,1:19:58.69:191,0,59	0/1:16,1:17:82.16:104,0,82	0/1:24,0:24:99:110,0,150	0/1:33,0:32:99:159,0,109	0/1:21,0:21:38.77:39,0,219	1/1:25,3:28:36.22:400,36,0	0/1:25,0:25:52.81:107,0,53	0/1:20,0:20:67.87:68,0,75	0/1:20,1:21:76.46:76,0,88	1/1:23,2:25:26.82:291,27,0	0/0:23,0:23:57.99:0,58,768	0/0:31,0:31:28.51:0,29,265	0/0:36,0:36:89.67:0,90,1282	0/1:24,1:25:30.74:119,0,31	0/1:23,1:22:85.92:86,0,176	0/1:13,0:12:27.67:28,0,51	0/1:26,0:26:99:143,0,128	0/1:19,1:19:40.28:168,0,40	0/1:14,4:17:15.80:235,0,16	0/1:28,3:31:22.78:211,0,23	0/1:11,0:11:27.85:28,0,45	0/1:26,0:26:90.36:90,0,145	0/1:31,2:33:99:163,0,237	0/1:22,0:20:57.23:57,0,131
chr10	92185946	.	TC	T	6900.94	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=-3.003;DP=670;FS=0.851;HRun=4;HaplotypeScore=93.7260;InbreedingCoeff=0.9010;MQ=63.87;MQ0=7;MQRankSum=1.666;QD=13.56;ReadPosRankSum=-2.560;VQSLOD=3.2199;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:90.98:0,91,939	0/0:8,0:8:22.23:0,22,206	0/0:29,0:15:15.05:0,15,148	0/0:22,0:11:17.10:0,17,129	1/1:20,0:20:31.85:285,32,0	1/1:17,0:17:29.40:227,29,0	1/1:23,3:26:31.10:327,31,0	1/1:28,2:29:38.17:325,38,0	0/1:22,0:22:3.97:116,0,4	1/1:20,7:27:65.48:593,65,0	1/1:5,20:25:49.04:434,49,0	1/1:13,7:21:34.88:354,35,0	1/1:16,5:21:34.29:355,34,0	1/1:20,5:25:56.84:541,57,0	0/0:23,0:23:47.52:0,48,486	1/1:32,0:32:21.28:164,21,0	0/0:35,0:35:83.05:0,83,864	1/1:14,10:24:46.24:512,46,0	1/1:24,0:22:11.39:150,11,0	1/1:11,0:10:11.05:67,11,0	1/1:23,0:23:18.85:204,19,0	1/1:15,5:19:34.69:316,35,0	1/1:15,3:17:42.66:382,43,0	1/1:17,13:30:59.02:610,59,0	1/1:9,2:11:15.42:136,15,0	1/1:23,4:27:37.57:342,38,0	1/1:32,1:33:39.27:323,39,0	1/1:22,0:20:17.09:139,17,0
chr10	92186021	.	T	TTG	8521.91	PASS	AB=0.702;AC=27;AF=0.482;AN=56;BaseQRankSum=-14.118;DP=625;FS=7.505;HRun=0;HaplotypeScore=84.8751;InbreedingCoeff=0.7750;MQ=61.00;MQ0=3;MQRankSum=0.637;QD=25.36;ReadPosRankSum=0.297;VQSLOD=5.6091;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:75.63:0,76,1119	0/0:7,0:7:18.06:0,18,223	0/0:19,0:15:29.02:0,29,261	0/0:14,0:11:17.36:0,17,204	0/0:14,0:14:33.09:0,33,391	1/1:5,14:19:27.09:442,27,0	1/1:9,23:32:48.16:785,48,0	1/1:6,27:35:27.38:1126,27,0	0/0:24,0:24:63.18:0,63,767	1/1:7,17:24:47.93:646,48,0	1/1:7,3:10:5.07:205,5,0	1/1:5,18:23:45.15:734,45,0	1/1:2,15:17:33.09:539,33,0	0/1:9,21:31:24.75:728,0,25	0/0:18,0:18:54.14:0,54,634	1/1:6,24:30:51.17:834,51,0	0/0:31,0:31:78.22:0,78,950	1/1:4,14:18:33.11:540,33,0	0/0:25,0:26:53.86:0,54,563	0/0:9,0:9:21.06:0,21,249	0/0:35,0:35:96.30:0,96,1189	1/1:4,12:16:19.04:385,19,0	0/1:6,10:16:7.04:412,0,7	1/1:4,20:24:48.02:785,48,0	1/1:2,10:12:18.06:295,18,0	0/1:26,3:29:65.73:66,0,774	0/0:33,0:33:75.21:0,75,902	0/0:18,0:18:30.62:0,31,382
chr10	92187980	.	AGGT	A	8272.66	PASS	AB=0.905;AC=29;AF=0.518;AN=56;BaseQRankSum=12.379;DP=473;FS=13.733;HRun=0;HaplotypeScore=75.6221;InbreedingCoeff=0.8873;MQ=79.79;MQ0=0;MQRankSum=-4.589;QD=33.49;ReadPosRankSum=1.503;VQSLOD=4.1967;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.33:0,96,2037	0/0:2,0:2:6.02:0,6,128	0/0:17,0:17:45.15:0,45,942	0/0:12,0:12:29.82:0,30,634	0/0:9,0:9:27.09:0,27,574	1/1:2,7:8:21.07:333,21,0	1/1:7,29:36:75.26:1189,75,0	1/1:4,15:19:45.08:713,45,0	0/0:12,0:12:33.11:0,33,704	1/1:2,6:8:18.04:243,18,0	1/1:2,6:8:12.04:190,12,0	1/1:0,11:11:30.10:475,30,0	1/1:3,17:20:51.17:808,51,0	1/1:3,25:28:75.26:1186,75,0	0/0:15,0:15:45.15:0,45,983	1/1:1,15:16:45.15:713,45,0	0/0:29,1:30:24.57:0,25,1372	1/1:3,22:25:47.99:761,48,0	0/0:19,0:19:54.19:0,54,1159	0/0:7,0:7:15.05:0,15,326	0/0:54,0:54:99:0,144,3051	1/1:1,5:6:15.05:237,15,0	1/1:0,4:4:5.98:95,6,0	1/1:5,26:31:60.64:951,61,0	1/1:0,7:7:21.07:332,21,0	0/1:17,2:19:46.95:47,0,870	0/0:7,0:7:21.07:0,21,459	0/0:8,0:8:21.07:0,21,459
chr10	92188223	.	GT	G	2197.52	PASS	AB=0.714;AC=26;AF=0.464;AN=56;BaseQRankSum=-1.599;DP=516;FS=1.316;HRun=14;HaplotypeScore=119.8933;InbreedingCoeff=0.4974;MQ=65.57;MQ0=5;MQRankSum=-2.094;QD=8.55;ReadPosRankSum=0.931;VQSLOD=2.6553;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:34:45.48:0,45,661	0/1:4,5:9:34.86:81,0,35	0/0:28,1:18:1.55:0,2,4	0/0:31,0:12:12.80:0,13,83	0/0:27,0:27:60.51:0,61,344	0/1:10,7:17:59.54:144,0,60	1/1:7,3:9:12.76:83,13,0	0/1:16,0:31:15.25:30,0,15	0/0:13,0:13:28.87:0,29,165	0/1:7,5:13:4.78:96,0,5	0/1:10,10:20:40.18:182,0,40	0/1:16,2:18:19.81:123,0,20	1/1:10,1:11:8.72:106,9,0	1/1:8,8:16:35.47:236,35,0	1/1:5,11:18:42.62:274,43,0	1/1:13,10:23:4.31:230,4,0	1/1:6,11:17:39.37:268,39,0	0/0:13,0:10:10.48:0,10,116	0/0:14,0:13:22.54:0,23,123	0/0:16,0:16:26.18:0,26,160	0/0:10,0:10:25.88:0,26,158	1/1:3,2:6:8.16:48,8,0	1/1:7,11:17:31.44:227,31,0	1/1:6,2:9:10.89:67,11,0	1/1:11,7:18:7.38:201,7,0	0/0:29,1:30:38.41:0,38,255	0/0:28,0:28:80.27:0,80,508	0/0:12,0:11:17.41:0,17,99
chr10	92188258	.	GT	G	4065.66	PASS	AB=0.916;AC=25;AF=0.446;AN=56;BaseQRankSum=-5.352;DP=570;FS=8.326;HRun=10;HaplotypeScore=147.4584;InbreedingCoeff=0.6069;MQ=38.70;MQ0=24;MQRankSum=-0.566;QD=15.11;ReadPosRankSum=1.072;VQSLOD=2.5196;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:69.14:0,69,806	1/1:0,12:12:35.99:312,36,0	0/0:40,0:5:5.44:0,5,33	0/0:59,0:5:4.55:0,5,25	1/1:6,18:22:59.99:520,60,0	0/1:13,1:14:50.65:51,0,75	0/1:12,0:10:13.10:25,0,13	0/1:23,0:21:6.32:6,0,33	1/1:1,15:14:29.99:259,30,0	0/0:23,0:19:36.55:0,37,327	0/0:20,1:21:16.41:0,16,323	0/0:16,0:18:27.95:0,28,157	0/0:12,0:10:14.24:0,14,115	0/0:13,0:15:15.57:0,16,187	1/1:6,17:23:49.28:418,49,0	0/1:21,1:22:38.34:99,0,38	1/1:6,8:14:26.22:288,26,0	0/0:13,0:9:18.03:0,18,187	1/1:8,12:16:26.93:226,27,0	1/1:0,14:14:38.99:336,39,0	0/1:5,4:9:15.09:112,0,15	0/0:10,0:10:12.99:0,13,131	0/0:14,0:16:24.24:0,24,256	0/0:15,0:14:16.99:0,17,173	0/0:21,0:19:37.55:0,38,302	1/1:2,22:23:65.02:553,65,0	1/1:8,25:33:76.83:736,77,0	1/1:1,8:9:11.46:125,11,0
chr10	92188268	.	TG	T	1294.25	PASS	AB=0.993;AC=36;AF=0.643;AN=56;BaseQRankSum=0.257;DP=563;FS=0.906;HRun=1;HaplotypeScore=157.4489;InbreedingCoeff=-0.0492;MQ=42.21;MQ0=23;MQRankSum=-1.346;QD=3.16;ReadPosRankSum=2.074;VQSLOD=0.1847;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:78.93:0,79,817	1/1:13,0:13:7.44:81,7,0	0/0:50,0:7:0.65:0,1,19	0/0:57,2:7:6.40:0,6,22	0/1:27,0:25:11.32:69,0,11	1/1:16,1:17:5.70:61,6,0	1/1:12,0:10:0.37:20,0,0	1/1:18,1:16:31.40:216,31,0	0/1:16,0:14:1.50:47,0,2	0/1:22,0:18:43.13:43,0,96	0/1:22,0:21:51.07:51,0,57	0/1:15,0:16:22.71:56,0,23	0/1:10,0:8:12.66:27,0,13	0/1:14,0:14:22.31:34,0,22	1/1:21,0:21:2.93:102,3,0	1/1:19,0:19:1.15:63,1,0	1/1:12,1:13:3.32:111,3,0	0/0:11,0:9:14.98:0,15,79	1/1:15,0:12:5.13:42,5,0	1/1:14,0:14:17.36:84,17,0	0/1:10,0:10:8.69:9,0,35	0/1:10,0:10:1.89:2,0,34	0/1:17,0:17:17.12:17,0,42	0/1:13,0:13:12.23:12,0,35	0/1:20,2:21:23.49:23,0,76	1/1:25,0:24:7.24:80,7,0	1/1:32,1:33:28.07:174,28,0	1/1:9,0:9:10.18:29,10,0
chr10	92188269	.	G	GT	2046.63	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=2.279;DP=570;FS=18.540;HRun=10;HaplotypeScore=159.9179;InbreedingCoeff=0.8724;MQ=42.12;MQ0=23;MQRankSum=-4.834;QD=7.08;ReadPosRankSum=-3.860;VQSLOD=-0.5898;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:82.66:0,83,745	0/0:13,0:13:32.74:0,33,269	0/0:50,0:7:7.68:0,8,48	0/1:60,0:7:9.28:9,0,9	0/0:26,0:24:59.19:0,59,458	1/1:17,0:17:5.10:41,5,0	1/1:14,0:12:9.96:40,10,0	1/1:19,0:16:3.04:24,3,0	0/0:16,0:14:32.76:0,33,261	1/1:23,0:19:35.77:246,36,0	1/1:21,1:21:43.61:332,44,0	1/1:16,0:16:32.23:229,32,0	1/1:9,0:7:16.03:113,16,0	1/1:16,0:16:28.44:208,28,0	0/0:21,0:21:49.52:0,50,410	1/1:17,2:19:28.51:131,29,0	0/0:12,0:12:29.50:0,30,239	1/1:11,0:9:14.90:115,15,0	0/0:16,0:13:23.87:0,24,194	0/0:14,0:14:32.61:0,33,284	0/0:10,0:10:14.94:0,15,124	1/1:11,0:11:15:133,15,0	1/1:16,0:17:28.03:220,28,0	1/1:13,0:13:18.37:141,18,0	1/1:21,1:21:39.80:285,40,0	0/0:25,0:24:65.50:0,66,523	0/0:33,0:33:87.09:0,87,658	0/0:9,0:9:15.60:0,16,107
chr10	92188273	.	T	TG	2742.32	PASS	AB=0.983;AC=21;AF=0.375;AN=56;BaseQRankSum=-1.676;DP=577;FS=7.018;HRun=0;HaplotypeScore=161.7729;InbreedingCoeff=0.8366;MQ=42.80;MQ0=24;MQRankSum=-5.523;QD=12.47;ReadPosRankSum=-1.780;VQSLOD=3.7276;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:99:0,105,1312	0/0:13,0:13:39.04:0,39,474	0/0:55,0:8:0.05:0,0,49	0/1:58,0:8:17.04:17,0,25	0/0:28,0:26:72.15:0,72,878	0/0:16,0:16:36.57:0,37,223	0/0:13,0:11:22.36:0,22,120	0/0:20,0:17:29.33:0,29,180	0/0:16,0:14:33.10:0,33,424	1/1:9,14:19:31.87:452,32,0	1/1:11,11:21:13.24:448,13,0	1/1:8,7:15:14.89:298,15,0	1/1:6,3:7:0.91:131,1,0	1/1:8,7:16:21.38:306,21,0	0/0:22,0:22:56.98:0,57,716	0/0:19,0:19:43.16:0,43,213	0/0:14,0:14:41.98:0,42,468	1/1:5,6:9:12.92:178,13,0	0/0:18,0:15:35.97:0,36,410	0/0:13,0:13:39.05:0,39,482	0/0:9,0:9:18.05:0,18,229	1/1:4,8:12:17.22:222,17,0	1/1:7,8:16:18.29:302,18,0	1/1:9,5:14:19.27:182,19,0	1/1:11,12:22:39.72:417,40,0	0/0:25,0:24:69.19:0,69,895	0/0:33,0:33:96.22:0,96,1194	0/0:7,0:7:17.92:0,18,212
chr10	92188284	.	TTTGG	T	2626.50	PASS	AB=0.954;AC=31;AF=0.554;AN=56;BaseQRankSum=0.518;DP=543;FS=0.000;HRun=0;HaplotypeScore=172.2269;InbreedingCoeff=0.5238;MQ=46.23;MQ0=16;MQRankSum=-3.799;QD=7.70;ReadPosRankSum=-7.040;VQSLOD=0.0490;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:46.22:0,46,1044	0/0:10,0:10:30.10:0,30,453	0/1:49,0:9:1.51:2,0,98	0/0:54,0:11:14.07:0,14,228	0/1:23,0:25:8.59:9,0,330	1/1:15,0:15:16.67:174,17,0	1/1:14,0:12:19.20:163,19,0	1/1:21,1:19:39.83:354,40,0	0/0:13,0:11:26.24:0,26,240	1/1:20,0:16:38.17:284,38,0	1/1:18,1:18:21.72:288,22,0	1/1:13,2:15:31.89:216,32,0	0/1:7,2:7:3.78:72,0,4	1/1:15,0:15:16.24:135,16,0	0/0:23,0:23:48.59:0,49,663	1/1:20,0:20:22.52:269,23,0	0/0:14,0:14:38.63:0,39,495	1/1:12,0:10:11.49:90,11,0	0/0:15,0:14:15.06:0,15,148	0/0:13,0:13:1.78:0,2,387	0/1:9,0:9:26.21:26,0,64	1/1:12,0:12:23.84:218,24,0	1/1:15,0:15:23.10:185,23,0	0/1:12,0:12:4.67:82,0,5	1/1:18,0:17:11.30:198,11,0	0/0:22,0:21:52.63:0,53,583	0/1:32,0:34:17.23:17,0,550	0/1:5,1:6:46.89:47,0,49
chr10	92188285	.	TTGG	T	4420.35	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-1.368;DP=535;FS=2.397;HRun=0;HaplotypeScore=158.1116;InbreedingCoeff=0.6320;MQ=46.42;MQ0=14;MQRankSum=-3.034;QD=13.16;ReadPosRankSum=-7.614;VQSLOD=2.6235;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:40.69:0,41,764	0/0:11,0:11:29.64:0,30,325	0/1:49,0:9:1.72:2,0,86	0/0:51,0:11:16.33:0,16,201	0/1:24,0:24:43.08:43,0,204	1/1:15,0:15:28.28:303,28,0	1/1:8,5:12:21.02:233,21,0	1/1:21,1:19:44.21:450,44,0	0/0:13,0:11:21.09:0,21,135	1/1:15,4:15:39.33:422,39,0	1/1:18,1:18:43.76:443,44,0	1/1:15,0:15:34.31:344,34,0	1/1:9,0:7:11.96:135,12,0	1/1:14,1:15:24.64:245,25,0	0/0:24,0:24:47.73:0,48,488	1/1:20,0:20:40.89:511,41,0	0/0:14,0:14:33.67:0,34,360	1/1:12,0:10:12.04:151,12,0	0/0:15,0:14:18.06:0,18,108	0/0:13,0:13:8.14:0,8,264	0/1:9,0:9:26.65:32,0,27	1/1:10,2:12:24.06:313,24,0	1/1:13,1:14:30.82:294,31,0	1/1:11,1:12:8.59:147,9,0	1/1:16,2:17:26.30:289,26,0	0/0:20,0:20:46.74:0,47,357	0/1:33,0:33:19.13:19,0,326	0/1:6,0:6:22.72:45,0,23
chr10	92188286	.	TGG	T	5468.99	PASS	AB=0.968;AC=35;AF=0.625;AN=56;BaseQRankSum=-1.702;DP=517;FS=7.234;HRun=2;HaplotypeScore=140.4853;InbreedingCoeff=0.5715;MQ=47.17;MQ0=14;MQRankSum=-3.442;QD=16.09;ReadPosRankSum=-6.805;VQSLOD=-0.4699;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:35.29:0,35,463	0/0:11,0:11:29.32:0,29,202	0/1:46,1:9:2.18:2,0,66	0/0:48,0:11:17.46:0,17,180	0/1:21,2:23:68.41:103,0,68	1/1:2,13:15:30.01:380,30,0	1/1:6,6:11:21.07:289,21,0	1/1:7,13:17:39.01:470,39,0	0/0:13,0:11:4.48:0,4,32	1/1:10,8:14:38.48:498,38,0	1/1:10,10:19:49.60:590,50,0	1/1:5,8:13:33.08:426,33,0	1/1:6,2:6:17.54:196,18,0	1/1:3,10:13:24.06:306,24,0	0/0:23,0:23:43.08:0,43,280	1/1:8,10:18:47.64:640,48,0	0/0:15,0:15:30.01:0,30,221	1/1:1,10:9:12.04:177,12,0	0/0:14,0:13:6.66:0,7,50	0/0:14,0:14:3.14:0,3,125	0/1:10,0:10:5.50:37,0,5	1/1:3,9:12:24.08:324,24,0	1/1:3,9:12:30.04:359,30,0	1/1:7,5:12:15.67:195,16,0	1/1:8,6:15:26.90:313,27,0	0/1:21,0:21:19.16:19,0,118	0/1:30,2:32:57.96:58,0,102	1/1:7,0:7:3.66:86,4,0
chr10	92188287	.	G	GT	1644.08	PASS	AB=0.904;AC=22;AF=0.393;AN=56;BaseQRankSum=-1.257;DP=507;FS=10.481;HRun=8;HaplotypeScore=147.9394;InbreedingCoeff=0.5402;MQ=47.66;MQ0=12;MQRankSum=-3.601;QD=7.51;ReadPosRankSum=0.254;VQSLOD=0.4338;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:67.15:0,67,443	0/0:11,0:11:24.71:0,25,141	0/0:45,0:9:2.56:0,3,81	0/0:48,0:11:6.66:0,7,99	0/1:11,10:23:0.37:287,0,0	0/0:15,0:15:15.06:0,15,50	0/0:12,0:11:8.49:0,8,24	0/0:20,0:17:5.50:0,5,17	1/1:6,7:11:17.91:218,18,0	0/1:18,0:14:1.74:5,0,2	0/1:20,0:19:4.20:10,0,4	0/1:15,0:15:2.31:2,0,4	0/1:8,0:7:4.54:5,0,5	0/0:13,0:13:4.60:0,5,14	0/0:20,1:21:13.77:0,14,207	0/0:18,0:18:13.46:0,13,39	0/0:15,0:15:39.01:0,39,215	0/0:11,0:9:4.28:0,4,11	1/1:7,5:11:17.90:174,18,0	1/1:7,7:14:5.58:198,6,0	0/1:7,3:10:0.02:93,0,0	1/1:12,0:12:0.23:15,0,0	0/0:11,0:12:8.24:0,8,30	0/0:13,0:13:6.42:0,6,26	1/1:15,0:15:1.47:16,1,0	1/1:12,8:20:22.40:271,22,0	1/1:18,12:31:26.69:436,27,0	1/1:7,1:8:12.75:86,13,0
chr10	92189180	.	GT	G	1616.38	PASS	AB=0.883;AC=21;AF=0.375;AN=56;BaseQRankSum=6.137;DP=528;FS=4.507;HRun=14;HaplotypeScore=58.6452;InbreedingCoeff=0.7620;MQ=71.35;MQ0=1;MQRankSum=1.527;QD=9.40;ReadPosRankSum=2.829;VQSLOD=3.0720;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:28:56.70:0,57,488	0/1:8,0:8:7.20:7,0,72	0/0:19,0:10:9.34:0,9,89	0/1:13,0:11:3.45:3,0,88	0/0:24,0:28:33.07:0,33,397	0/0:20,0:24:56.72:0,57,495	0/0:14,0:14:35.86:0,36,314	0/0:36,0:39:54.63:0,55,598	0/0:10,0:11:20.86:0,21,181	1/1:3,14:17:34.70:232,35,0	1/1:4,10:14:5.24:157,5,0	1/1:5,11:16:10.34:208,10,0	1/1:3,10:13:20.79:144,21,0	1/1:4,9:13:20.79:144,21,0	0/0:17,1:19:24.28:0,24,348	0/0:19,1:20:33.46:0,33,446	0/0:25,0:25:68.89:0,69,619	1/1:3,14:17:10.85:219,11,0	0/0:15,1:17:12.29:0,12,240	0/0:19,0:23:44.34:0,44,353	0/0:15,0:15:29.95:0,30,258	1/1:1,7:8:17.81:123,18,0	1/1:3,16:20:24.08:254,24,0	1/1:6,14:20:35.67:247,36,0	0/1:6,7:13:9.88:85,0,10	0/0:21,0:21:12.87:0,13,234	0/0:24,0:27:46.72:0,47,525	0/0:22,0:25:47.90:0,48,538
chr10	92190727	.	TA	T	3963.02	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-1.483;DP=178;FS=51.705;HRun=1;HaplotypeScore=51.0561;InbreedingCoeff=0.5200;MQ=65.62;MQ0=3;MQRankSum=-3.808;QD=26.42;ReadPosRankSum=-1.464;VQSLOD=-0.0543;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,6:7:9.03:117,9,0	1/1:0,6:6:15.05:193,15,0	0/0:10,1:7:15.37:0,15,173	0/0:17,0:6:9.03:0,9,136	1/1:0,4:4:12.04:154,12,0	1/1:0,4:4:11.87:125,12,0	1/1:0,4:2:5.98:58,6,0	1/1:0,2:2:6.02:77,6,0	1/1:0,1:1:3.01:38,3,0	1/1:1,8:7:17.99:191,18,0	1/1:0,7:7:15.03:168,15,0	1/1:1,8:9:18.04:204,18,0	1/1:1,3:2:5.99:60,6,0	1/1:1,4:5:12.03:140,12,0	1/1:1,6:7:21.07:266,21,0	1/1:2,4:6:15.01:159,15,0	1/1:3,7:10:21.06:254,21,0	1/1:3,5:8:15.05:191,15,0	1/1:3,2:5:12.02:130,12,0	1/1:0,4:4:12.04:147,12,0	0/1:3,0:3:6.18:18,0,6	1/1:1,7:7:18.06:226,18,0	1/1:0,4:4:9.03:115,9,0	1/1:2,4:6:12.02:130,12,0	1/1:1,9:8:21.07:262,21,0	1/1:1,4:5:12.04:154,12,0	1/1:0,6:6:15.05:191,15,0	1/1:1,5:5:15.05:193,15,0
chr10	92190743	.	A	AAG	1741.59	PASS	AB=1.000;AC=23;AF=0.426;AN=54;BaseQRankSum=6.161;DP=340;FS=4.300;HRun=0;HaplotypeScore=143.0693;InbreedingCoeff=0.7108;MQ=58.49;MQ0=2;MQRankSum=-1.982;QD=11.46;ReadPosRankSum=2.556;VQSLOD=3.5766;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:23.91:0,24,148	0/0:7,0:7:17.71:0,18,114	0/1:17,0:10:3.75:4,0,63	0/1:23,0:11:9.37:9,0,49	0/0:24,0:23:51.24:0,51,322	0/0:9,0:9:5.73:0,6,102	0/0:8,0:6:14.82:0,15,98	0/0:19,0:19:47.52:0,48,301	0/0:9,0:9:20.74:0,21,138	1/1:10,4:15:28.43:235,28,0	1/1:5,6:13:27.73:307,28,0	1/1:4,4:8:14.78:135,15,0	1/1:5,4:7:20.50:160,20,0	1/1:6,1:7:10.32:59,10,0	0/0:12,0:12:11.61:0,12,153	0/1:6,0:6:21.84:22,0,30	0/0:21,0:21:31.03:0,31,180	1/1:11,4:15:24.01:303,24,0	0/0:20,0:18:35.14:0,35,234	0/0:12,0:11:26.23:0,26,174	./.	1/1:2,2:3:8.86:108,9,0	1/1:8,2:10:0.43:94,0,0	1/1:2,4:6:14.98:181,15,0	1/1:9,5:14:30.99:327,31,0	0/0:17,0:15:41.74:0,42,261	0/0:9,0:8:20.52:0,21,168	0/0:5,0:4:10.13:0,10,62
chr10	92190749	.	G	GA	5388.40	PASS	AB=1.000;AC=52;AF=0.963;AN=54;BaseQRankSum=1.457;DP=350;FS=0.000;HRun=13;HaplotypeScore=132.6336;InbreedingCoeff=-0.0632;MQ=54.79;MQ0=2;MQRankSum=-1.714;QD=15.44;ReadPosRankSum=2.976;VQSLOD=4.2660;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,10:18:27.07:243,27,0	1/1:3,4:7:13.58:127,14,0	0/1:17,0:10:39.80:40,0,54	0/1:17,0:10:29.34:29,0,32	1/1:10,18:27:25.64:419,26,0	1/1:8,0:8:16.09:73,16,0	1/1:10,0:8:9.94:48,10,0	1/1:6,14:20:41.72:449,42,0	1/1:6,3:9:12.39:112,12,0	1/1:7,11:16:20.69:355,21,0	1/1:1,12:13:36.08:377,36,0	1/1:4,4:8:14.99:150,15,0	1/1:3,6:7:18.05:194,18,0	1/1:5,5:10:18.04:193,18,0	1/1:3,11:14:35.32:338,35,0	1/1:5,0:6:7.78:59,8,0	1/1:7,12:19:11.03:126,11,0	1/1:2,14:16:38.97:403,39,0	1/1:13,7:18:18.03:159,18,0	1/1:7,4:10:17.29:174,17,0	./.	1/1:2,2:3:5.08:60,5,0	1/1:4,8:12:10.16:205,10,0	1/1:1,6:6:14.53:136,15,0	1/1:4,12:14:36.63:377,37,0	1/1:8,9:16:39.39:348,39,0	1/1:4,4:7:13.14:159,13,0	1/1:5,1:5:3.44:34,3,0
chr10	92190754	.	G	GAA	1607.03	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=0.426;DP=350;FS=7.843;HRun=9;HaplotypeScore=155.6938;InbreedingCoeff=0.0969;MQ=55.04;MQ0=2;MQRankSum=-2.396;QD=5.12;ReadPosRankSum=4.897;VQSLOD=-0.1866;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:23.22:23,0,33	1/1:7,0:7:6.29:30,6,0	0/0:16,0:10:20.23:0,20,166	0/0:18,0:10:5.74:0,6,113	0/1:28,0:27:53.69:54,0,56	1/1:4,4:8:21.06:298,21,0	1/1:7,3:8:21.02:264,21,0	1/1:18,0:18:27.18:87,27,0	0/1:9,0:9:7.02:10,0,7	1/1:16,1:16:0.32:104,0,0	1/1:13,0:13:26.28:87,26,0	0/1:7,0:7:10.15:17,0,10	1/1:9,0:8:13.67:45,14,0	0/1:13,0:13:21.56:22,0,96	1/1:14,0:14:5.57:68,6,0	1/1:8,1:9:17.83:223,18,0	0/1:15,0:15:6.59:26,0,7	1/1:16,0:16:1.38:59,1,0	1/1:19,1:18:16.44:64,16,0	1/1:12,0:11:1.93:28,2,0	0/0:2,0:2:0:0,0,0	1/1:4,0:3:4.19:13,4,0	0/1:13,0:13:17.96:18,0,67	1/1:7,0:6:9.33:32,9,0	1/1:17,0:15:21.07:75,21,0	1/1:18,0:16:12.42:84,12,0	1/1:8,0:7:7.39:23,7,0	0/1:4,0:4:2.70:3,0,18
chr10	92190793	.	GTT	G	4181.82	PASS	AB=0.817;AC=29;AF=0.518;AN=56;BaseQRankSum=-0.926;DP=404;FS=3.221;HRun=12;HaplotypeScore=158.7438;InbreedingCoeff=0.7741;MQ=53.73;MQ0=1;MQRankSum=-4.155;QD=18.75;ReadPosRankSum=-0.012;VQSLOD=1.2208;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:30:74.89:0,75,1019	0/0:8,0:9:24.06:0,24,312	0/1:18,1:12:21.59:22,0,131	0/1:21,1:11:22.88:23,0,68	0/0:15,0:36:82.50:0,83,735	1/1:2,7:10:14.14:204,14,0	1/1:2,12:16:35.52:329,36,0	0/1:5,12:16:8.34:316,0,8	0/0:1,0:7:17.91:0,18,151	1/1:2,13:15:39.06:397,39,0	1/1:2,10:12:24.48:244,24,0	1/1:2,7:9:22.78:218,23,0	1/1:2,7:10:23.78:222,24,0	1/1:2,14:16:48.10:487,48,0	0/0:16,0:16:38.54:0,39,477	1/1:3,5:9:14.41:114,14,0	0/0:24,0:26:74.68:0,75,1019	1/1:4,15:19:21.86:399,22,0	0/0:5,0:11:17.86:0,18,157	0/0:6,0:12:29.97:0,30,308	0/0:1,0:7:11.85:0,12,100	1/1:0,6:6:18.04:183,18,0	1/1:4,13:17:42.02:416,42,0	1/1:2,8:10:18.03:183,18,0	1/1:1,14:15:42.09:425,42,0	0/0:7,0:14:32.89:0,33,321	0/0:5,0:8:17.95:0,18,184	0/0:2,0:5:12.02:0,12,129
chr10	92190804	.	TTG	T	1406.54	PASS	AB=0.986;AC=24;AF=0.429;AN=56;BaseQRankSum=4.838;DP=423;FS=0.875;HRun=0;HaplotypeScore=156.8206;InbreedingCoeff=0.3957;MQ=55.55;MQ0=3;MQRankSum=-4.338;QD=5.96;ReadPosRankSum=2.164;VQSLOD=3.2118;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:83.71:0,84,1038	0/0:9,0:9:24.85:0,25,271	0/1:30,0:13:8.99:9,0,91	0/1:27,0:12:36.63:37,0,40	0/0:34,0:34:36.09:0,36,485	0/1:10,0:10:20.23:72,0,20	1/1:14,0:14:15.95:118,16,0	0/1:18,1:18:28.92:75,0,29	0/0:8,0:8:15.54:0,16,115	1/1:14,0:14:3.99:89,4,0	1/1:12,0:12:0.38:88,0,0	0/1:11,0:11:21.20:101,0,21	1/1:9,0:9:19.65:113,20,0	1/1:15,2:17:24.07:254,24,0	0/0:16,0:16:33.54:0,34,372	1/1:7,0:7:12.33:55,12,0	0/0:28,0:28:76.81:0,77,1021	1/1:18,0:18:39.02:183,39,0	0/0:14,0:14:26.36:0,26,206	0/0:10,0:10:21.77:0,22,176	0/0:8,0:8:8.97:0,9,103	1/1:6,0:6:16.24:79,16,0	0/1:15,1:16:5.31:155,0,5	0/1:9,0:9:4.33:52,0,4	0/1:16,0:16:5.61:120,0,6	0/0:13,0:13:30.84:0,31,304	0/0:9,0:9:14.66:0,15,157	0/0:5,0:5:11.86:0,12,114
chr10	92190818	.	GT	G	224.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.506;DP=416;FS=0.000;HRun=6;HaplotypeScore=131.8662;InbreedingCoeff=0.8509;MQ=57.10;MQ0=4;MQRankSum=-0.233;QD=12.49;ReadPosRankSum=-1.202;VQSLOD=1.7547;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.01:0,93,1073	0/0:8,0:8:18.02:0,18,216	0/0:32,0:13:17.07:0,17,195	0/0:33,0:14:12.58:0,13,161	0/0:28,0:28:42.26:0,42,443	0/0:8,0:8:21.07:0,21,275	0/0:14,0:14:32.99:0,33,377	1/1:6,12:16:21.46:317,21,0	0/0:7,0:7:15.40:0,15,156	0/0:15,0:15:39.05:0,39,463	0/0:11,0:11:21.01:0,21,238	0/0:13,0:13:29.96:0,30,358	0/0:10,0:10:26.87:0,27,276	0/0:17,0:17:47.93:0,48,545	0/0:14,0:14:38.86:0,39,408	0/0:6,0:6:15.01:0,15,177	0/0:30,0:30:81.03:0,81,1017	0/0:18,0:18:41.65:0,42,492	0/0:10,0:9:17.99:0,18,215	0/0:7,0:7:17.91:0,18,175	0/0:8,0:8:12.04:0,12,158	0/0:6,0:6:14.96:0,15,157	0/0:16,0:16:38.91:0,39,416	0/0:10,0:10:24.08:0,24,315	0/0:12,0:12:27.03:0,27,334	0/0:14,0:14:38.99:0,39,441	0/0:12,0:12:30.02:0,30,342	0/0:7,0:7:15.05:0,15,195
chr10	92191130	.	GA	G	1997.77	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.178;DP=656;FS=6.025;HRun=7;HaplotypeScore=67.1763;InbreedingCoeff=0.9987;MQ=71.90;MQ0=1;MQRankSum=-0.655;QD=24.36;ReadPosRankSum=1.546;VQSLOD=4.1584;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1252	0/0:10,0:10:27.08:0,27,329	0/0:22,0:20:42.12:0,42,497	0/0:17,0:16:30.02:0,30,339	0/0:25,0:25:66.19:0,66,805	1/1:4,27:31:78.18:795,78,0	1/1:3,22:25:60.13:612,60,0	0/0:27,0:27:69.21:0,69,847	0/0:28,0:28:75.22:0,75,920	0/0:28,0:28:78.24:0,78,971	0/0:9,0:10:23.91:0,24,279	0/0:29,0:29:81.23:0,81,1003	0/0:22,0:22:63.19:0,63,782	0/0:28,0:28:78.25:0,78,980	0/0:32,0:32:90.27:0,90,1108	1/1:1,25:26:71.70:734,72,0	0/0:31,0:31:84.26:0,84,1040	0/0:19,0:19:51.16:0,51,640	0/0:25,0:24:66.19:0,66,796	0/0:15,0:15:45.14:0,45,565	0/0:18,0:18:45.14:0,45,566	0/0:18,0:18:54.17:0,54,679	0/0:22,0:22:63.20:0,63,792	0/0:33,0:33:90.28:0,90,1118	0/0:18,0:18:45.14:0,45,565	0/0:19,0:19:54.16:0,54,665	0/0:25,0:25:69.21:0,69,849	0/0:17,0:17:51.16:0,51,639
chr10	92192701	.	A	AAAG	2456.61	PASS	AB=0.850;AC=46;AF=0.958;AN=48;BaseQRankSum=1.698;DP=452;FS=0.000;HRun=0;HaplotypeScore=68.9702;InbreedingCoeff=-0.1041;MQ=50.23;MQ0=13;MQRankSum=-0.739;QD=6.84;ReadPosRankSum=-0.246;VQSLOD=2.2855;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:14:6.49:74,6,0	1/1:5,1:6:3.01:52,3,0	./.	./.	1/1:13,1:14:10.39:142,10,0	1/1:8,0:9:12.04:156,12,0	1/1:23,0:20:5.47:28,5,0	./.	1/1:10,0:10:2.97:20,3,0	1/1:12,0:12:10.22:98,10,0	1/1:20,0:19:19.29:177,19,0	1/1:16,0:16:5.75:39,6,0	1/1:18,0:18:8.99:109,9,0	1/1:14,0:14:17.97:217,18,0	1/1:17,0:17:15.05:252,15,0	0/1:20,0:20:26.68:91,0,27	0/1:4,3:7:31.25:49,0,31	1/1:5,0:8:3:25,3,0	1/1:11,0:10:7.18:43,7,0	1/1:18,0:18:22.78:183,23,0	1/1:10,0:10:6.02:81,6,0	1/1:19,0:18:6.63:45,7,0	1/1:25,0:26:18.94:115,19,0	./.	1/1:16,0:11:17.59:122,18,0	1/1:14,0:15:15.80:124,16,0	1/1:22,0:20:11.33:86,11,0	1/1:8,0:11:18.06:226,18,0
chr10	92192787	.	T	TG	4877.29	PASS	AB=0.600;AC=15;AF=0.268;AN=56;BaseQRankSum=-10.760;DP=609;FS=15.506;HRun=7;HaplotypeScore=66.5267;InbreedingCoeff=0.9083;MQ=77.46;MQ0=1;MQRankSum=-2.057;QD=27.87;ReadPosRankSum=0.449;VQSLOD=3.8937;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.08:0,51,492	0/0:9,0:9:27.04:0,27,261	0/0:32,0:25:72.07:0,72,680	0/0:23,0:20:50.82:0,51,480	1/1:2,23:25:57.17:688,57,0	0/0:15,0:15:42.07:0,42,406	0/0:27,0:27:69.09:0,69,661	0/0:25,0:25:45.04:0,45,431	1/1:2,15:17:39.12:469,39,0	0/0:25,0:25:69.11:0,69,666	0/0:14,0:14:33.04:0,33,313	0/0:25,0:25:62.20:0,62,600	0/0:18,0:18:45.07:0,45,434	0/0:30,0:30:72.04:0,72,680	0/0:25,0:25:69.10:0,69,666	0/0:37,0:37:99:0,108,1043	0/0:19,0:19:51.08:0,51,493	0/0:11,0:11:24.04:0,24,231	1/1:4,14:17:36.09:421,36,0	1/1:2,13:15:39.12:470,39,0	1/1:4,28:32:75.23:906,75,0	0/0:17,0:17:45.07:0,45,435	0/0:20,0:20:48.04:0,48,451	0/0:21,0:21:63.09:0,63,603	0/0:20,0:20:54.06:0,54,514	0/1:7,14:21:35.68:456,0,36	1/1:3,27:29:81.21:960,81,0	1/1:2,15:17:42.13:507,42,0
chr10	92194383	.	A	AAAGG	10232.21	PASS	AB=0.657;AC=21;AF=0.375;AN=56;BaseQRankSum=-14.636;DP=628;FS=3.441;HRun=0;HaplotypeScore=95.3184;InbreedingCoeff=0.9035;MQ=57.07;MQ0=5;MQRankSum=-0.432;QD=34.45;ReadPosRankSum=4.091;VQSLOD=4.9961;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:35.84:0,36,1033	0/0:10,0:10:21.07:0,21,344	0/0:12,0:4:6.02:0,6,86	0/0:14,0:10:15.04:0,15,207	1/1:13,24:35:44.44:1461,44,0	1/1:9,22:31:33.11:803,33,0	0/1:11,12:23:27.58:411,0,28	0/0:30,0:30:57.17:0,57,855	1/1:4,18:22:36.12:876,36,0	0/0:23,0:22:54.17:0,54,821	0/0:12,0:11:27.09:0,27,438	0/0:19,0:18:39.13:0,39,622	0/0:18,0:18:36.08:0,36,517	0/0:22,0:20:60.15:0,60,943	0/0:32,0:31:66.21:0,66,1045	1/1:10,20:28:42.14:1024,42,0	0/0:28,0:25:52.38:0,52,776	0/0:11,0:10:30.06:0,30,432	1/1:16,6:19:27.05:506,27,0	1/1:3,26:33:75.01:1514,75,0	1/1:12,11:21:18.06:439,18,0	0/0:14,0:13:27.09:0,27,429	0/0:13,0:12:24.07:0,24,367	0/0:17,0:14:36.11:0,36,563	0/0:15,0:15:36.12:0,36,582	1/1:7,21:27:60.19:1387,60,0	1/1:6,26:33:54.19:1300,54,0	1/1:1,11:12:21.07:512,21,0
chr10	92194981	.	C	CT	749.58	PASS	AB=0.917;AC=3;AF=0.054;AN=56;BaseQRankSum=-5.727;DP=622;FS=10.940;HRun=8;HaplotypeScore=59.8121;InbreedingCoeff=0.6682;MQ=68.07;MQ0=0;MQRankSum=0.653;QD=15.62;ReadPosRankSum=-4.611;VQSLOD=1.5543;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.02:0,63,573	0/0:14,0:14:36.02:0,36,329	0/0:10,0:9:12.18:0,12,151	0/0:9,0:8:13.11:0,13,99	0/0:37,0:37:96.04:0,96,878	0/0:20,0:20:60.02:0,60,545	0/0:27,0:28:83.08:0,83,747	1/1:15,22:37:75.19:844,75,0	0/0:15,0:15:39.01:0,39,353	0/0:26,0:26:78.04:0,78,711	0/0:32,0:32:80.98:0,81,727	0/0:25,0:25:63:0,63,568	0/0:16,0:16:35.91:0,36,326	0/0:27,0:27:75.03:0,75,682	0/0:27,0:27:72.02:0,72,655	0/0:23,0:23:38.48:0,38,520	0/0:10,0:10:23.99:0,24,215	0/0:24,0:24:69.01:0,69,626	0/1:10,1:11:4.77:5,0,213	0/0:31,0:31:81:0,81,731	0/0:4,0:4:12.01:0,12,110	0/0:26,0:26:75.04:0,75,684	0/0:25,0:25:72.01:0,72,650	0/0:14,0:14:36.02:0,36,330	0/0:26,0:26:71.99:0,72,646	0/0:31,0:31:81.01:0,81,732	0/0:31,0:31:84.03:0,84,768	0/0:19,0:19:54.02:0,54,494
chr10	92195706	.	AT	A	2271.67	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.061;DP=741;FS=0.000;HRun=6;HaplotypeScore=74.0482;InbreedingCoeff=0.9918;MQ=78.29;MQ0=0;MQRankSum=-1.899;QD=25.24;ReadPosRankSum=3.625;VQSLOD=3.7926;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:81.23:0,81,1030	0/0:12,0:12:36.10:0,36,459	0/0:20,0:19:44.82:0,45,476	0/0:21,0:21:13.46:0,13,329	0/0:27,0:27:75.04:0,75,897	1/1:1,14:15:39.10:419,39,0	1/1:2,31:33:81.20:869,81,0	0/0:29,0:29:72.20:0,72,888	0/0:23,0:23:69.21:0,69,892	0/0:26,0:26:78.23:0,78,979	0/0:24,0:24:63.16:0,63,767	0/0:35,0:35:99:0,102,1282	0/0:27,0:27:69.18:0,69,862	0/0:31,0:31:87.25:0,87,1111	0/0:39,0:39:99:0,111,1460	1/1:1,41:42:99:1126,105,0	0/0:14,0:14:42.13:0,42,539	0/0:13,0:13:39.13:0,39,512	0/0:25,0:25:60.12:0,60,717	0/0:29,0:29:72.21:0,72,904	0/0:41,0:41:99:0,114,1478	0/0:25,0:25:72.20:0,72,904	0/0:33,0:33:90.24:0,90,1104	0/0:23,0:23:69.14:0,69,844	0/0:20,0:20:60.17:0,60,748	0/0:25,0:25:66.18:0,66,814	0/0:43,0:43:99:0,117,1509	0/0:14,0:14:33.11:0,33,434
chr10	92196276	.	TA	T	2689.49	PASS	AB=0.931;AC=30;AF=0.536;AN=56;BaseQRankSum=11.179;DP=566;FS=5.048;HRun=13;HaplotypeScore=65.9865;InbreedingCoeff=0.7032;MQ=69.48;MQ0=0;MQRankSum=0.450;QD=8.85;ReadPosRankSum=4.497;VQSLOD=2.9038;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,3:35:9.33:0,9,561	0/0:6,0:6:15.02:0,15,146	0/0:12,0:11:14.99:0,15,131	0/1:13,0:11:36.09:36,0,46	0/1:13,2:15:7.85:8,0,233	1/1:7,0:19:26.26:75,26,0	1/1:3,0:15:22.40:65,22,0	0/0:36,1:37:58.30:0,58,663	0/0:24,1:25:32.19:0,32,464	1/1:2,12:15:8.34:199,8,0	1/1:4,10:15:29.78:217,30,0	1/1:6,27:33:68.55:503,69,0	1/1:3,19:23:46.77:334,47,0	1/1:2,13:15:29.80:219,30,0	0/1:19,0:20:7.43:7,0,257	1/1:3,0:25:38.69:112,39,0	0/0:21,1:22:26.09:0,26,387	1/1:3,15:18:32.79:241,33,0	0/0:15,1:16:14.10:0,14,288	0/0:37,0:37:81.03:0,81,756	0/1:7,1:8:15.77:16,0,68	1/1:2,8:10:23.86:175,24,0	1/1:8,15:25:42.72:296,43,0	1/1:4,6:12:15.97:99,16,0	1/1:3,20:23:23.53:304,24,0	0/0:24,0:24:21.33:0,21,355	0/0:34,0:34:40.26:0,40,670	0/0:14,0:14:11.09:0,11,231
chr10	92198290	.	G	GT	2661.50	PASS	AB=0.938;AC=30;AF=0.536;AN=56;BaseQRankSum=0.005;DP=557;FS=13.943;HRun=12;HaplotypeScore=105.8336;InbreedingCoeff=0.3133;MQ=67.98;MQ0=3;MQRankSum=-0.948;QD=7.08;ReadPosRankSum=-1.211;VQSLOD=0.6557;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,2:39:20.18:0,20,456	0/0:15,0:15:28.88:0,29,212	0/0:24,0:18:17.94:0,18,128	0/0:13,0:10:8.83:0,9,67	1/1:3,19:22:32.94:414,33,0	1/1:18,0:19:7.71:57,8,0	1/1:16,1:18:17.33:105,17,0	1/1:29,0:28:1.15:35,1,0	1/1:1,12:14:1.24:195,1,0	0/1:22,0:21:0.99:25,0,1	0/1:19,0:19:14.99:15,0,28	0/0:21,0:21:0.56:0,1,2	0/0:15,0:15:2.32:0,2,14	0/1:9,0:9:0.20:0,0,2	0/1:17,2:19:28.29:28,0,180	1/1:19,0:21:15.45:70,15,0	0/0:25,0:27:3:0,3,289	0/1:14,0:14:2.31:2,0,7	1/1:8,5:20:45.38:319,45,0	1/1:7,13:20:1.11:312,1,0	0/1:10,20:31:30.93:349,0,31	1/1:13,0:13:6.46:16,6,0	0/1:20,0:20:17.12:21,0,17	0/0:20,0:20:1.82:0,2,34	0/1:17,0:16:3.78:4,0,12	1/1:8,16:24:50.79:467,51,0	1/1:5,19:24:7.37:393,7,0	0/0:4,0:5:13.34:0,13,78
chr10	92198298	.	T	TTTTTTTG	1615	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=0.137;DP=565;FS=1.907;HRun=0;HaplotypeScore=166.0806;InbreedingCoeff=0.2241;MQ=61.60;MQ0=4;MQRankSum=-1.406;QD=7.11;ReadPosRankSum=-3.670;VQSLOD=1.9054;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:83.89:0,84,1429	0/0:14,0:14:31.36:0,31,607	0/0:21,0:11:2.96:0,3,135	0/1:16,0:7:12.06:12,0,43	0/0:22,0:22:1.32:0,1,295	1/1:6,8:21:18.06:455,18,0	1/1:6,8:17:18.02:401,18,0	0/1:29,0:28:70.39:70,0,79	0/0:16,0:16:17.19:0,17,290	0/1:28,0:27:6.98:7,0,479	0/0:18,0:18:9.32:0,9,353	0/0:22,0:22:14.85:0,15,153	0/0:14,0:14:21.90:0,22,232	0/0:10,0:10:7.21:0,7,106	0/0:16,0:16:37.48:0,37,620	1/1:6,9:24:21.87:516,22,0	0/0:27,0:27:17.80:0,18,895	0/0:14,0:14:24.85:0,25,261	0/1:21,0:20:83.87:208,0,84	0/1:18,0:18:7.74:8,0,346	0/1:28,0:28:29.15:29,0,372	0/0:16,0:16:10.95:0,11,218	0/0:22,0:22:6.56:0,7,358	0/0:20,0:20:29.97:0,30,288	0/0:19,0:18:8.74:0,9,310	0/1:25,0:25:71.94:72,0,273	0/0:24,0:24:17.26:0,17,425	0/0:5,0:5:14.99:0,15,201
chr10	92198302	.	TG	T	4546.41	PASS	AB=0.934;AC=26;AF=0.464;AN=56;BaseQRankSum=-0.323;DP=545;FS=7.741;HRun=1;HaplotypeScore=82.4493;InbreedingCoeff=0.6661;MQ=60.21;MQ0=4;MQRankSum=-3.242;QD=16.12;ReadPosRankSum=-5.136;VQSLOD=2.8602;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:92.42:0,92,939	0/0:13,0:13:30.16:0,30,375	0/1:18,1:10:7.50:8,0,172	0/0:16,0:6:7.94:0,8,58	0/0:23,0:23:57.89:0,58,326	0/0:13,0:13:16.99:0,17,114	0/1:13,2:14:28.54:29,0,29	1/1:24,1:24:12.61:256,13,0	0/0:16,0:16:23.78:0,24,187	1/1:21,6:26:76.81:757,77,0	1/1:9,7:16:40.12:446,40,0	1/1:0,21:21:14.77:177,15,0	1/1:9,5:14:39.42:410,39,0	1/1:9,2:11:29.94:267,30,0	0/0:16,0:16:43.16:0,43,434	0/1:17,2:19:23.61:24,0,26	0/0:27,0:27:40.69:0,41,553	1/1:10,6:16:35.56:315,36,0	0/1:21,0:20:47.87:48,0,136	0/0:18,0:18:26.88:0,27,255	0/0:28,0:28:42.63:0,43,362	1/1:11,6:17:47.62:449,48,0	1/1:13,9:22:53.33:538,53,0	1/1:14,4:18:33.36:354,33,0	1/1:18,3:20:49.74:471,50,0	0/0:27,0:27:0.40:0,0,320	0/0:26,0:26:32.07:0,32,321	0/0:5,0:5:9.95:0,10,119
chr10	92198588	.	TG	T	586.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.468;DP=595;FS=0.761;HRun=7;HaplotypeScore=62.7728;InbreedingCoeff=0.9989;MQ=80.63;MQ0=0;MQRankSum=-1.688;QD=21.71;ReadPosRankSum=-3.051;VQSLOD=2.3228;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.22:0,69,867	0/0:11,0:11:30.07:0,30,352	0/0:18,0:18:41.31:0,41,526	0/0:15,0:15:45.14:0,45,557	0/0:34,0:34:69.16:0,69,956	0/0:21,0:21:60.19:0,60,755	0/0:25,0:25:60.08:0,60,700	1/1:4,23:27:69.09:681,69,0	0/0:20,0:20:57.17:0,57,704	0/0:23,0:23:63.20:0,63,793	0/0:23,0:24:66.04:0,66,805	0/0:21,0:21:60.18:0,60,742	0/0:23,0:23:69.19:0,69,842	0/0:28,0:28:81.25:0,81,1007	0/0:26,0:26:66.21:0,66,830	0/0:20,0:20:51.16:0,51,642	0/0:28,0:28:75.22:0,75,929	0/0:18,0:18:51.03:0,51,576	0/0:12,0:11:33.11:0,33,414	0/0:27,0:27:66.18:0,66,803	0/0:17,0:17:51.16:0,51,642	0/0:20,0:20:48.15:0,48,603	0/0:17,0:17:50.78:0,51,572	0/0:11,0:11:33.11:0,33,415	0/0:21,0:21:50.18:0,50,597	0/0:26,0:26:78.18:0,78,908	0/0:20,0:20:51.16:0,51,633	0/0:17,0:17:43.02:0,43,530
chr10	92199500	.	CAA	C	1783.10	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-2.721;DP=510;FS=10.214;HRun=14;HaplotypeScore=71.8507;InbreedingCoeff=0.8487;MQ=44.92;MQ0=48;MQRankSum=5.151;QD=7.52;ReadPosRankSum=0.604;VQSLOD=0.1426;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:52.36:0,52,635	0/0:11,0:10:20.70:0,21,242	0/0:20,0:5:3.47:0,3,28	0/0:30,0:4:7.26:0,7,76	0/0:18,0:25:46.94:0,47,452	1/1:9,15:23:35.81:333,36,0	1/1:8,5:12:14.64:123,15,0	1/1:20,9:23:3.32:178,3,0	0/0:5,0:4:9.03:0,9,118	1/1:13,9:20:23.56:222,24,0	1/1:5,6:11:18.01:166,18,0	1/1:10,6:15:8.90:83,9,0	1/1:7,3:9:8.92:83,9,0	1/1:10,3:13:6.76:79,7,0	0/0:18,0:18:37.11:0,37,408	1/1:8,4:11:8.89:83,9,0	0/0:22,0:23:36.81:0,37,433	1/1:9,9:14:11.92:111,12,0	0/0:21,0:24:54.07:0,54,613	0/0:11,0:21:56.89:0,57,570	0/0:5,0:6:9.02:0,9,111	1/1:8,6:15:4.83:148,5,0	1/1:11,6:14:8.86:83,9,0	1/1:5,4:6:9.44:84,9,0	1/1:14,10:22:23.41:221,23,0	0/0:9,0:13:32.71:0,33,317	0/0:19,0:20:54.45:0,54,566	0/0:11,0:13:36.01:0,36,342
chr10	92199940	.	AGTGTGTGT	A	3551.45	PASS	AB=0.845;AC=15;AF=0.268;AN=56;BaseQRankSum=0.562;DP=645;FS=9.624;HRun=0;HaplotypeScore=173.4503;InbreedingCoeff=0.4851;MQ=60.32;MQ0=14;MQRankSum=-5.593;QD=14.68;ReadPosRankSum=0.329;VQSLOD=2.2829;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:31.66:0,32,1343	0/0:3,0:8:5.86:0,6,122	0/0:15,0:8:2.98:0,3,22	0/0:24,0:18:8.95:0,9,83	0/1:6,13:19:6.56:296,0,7	0/0:6,0:20:2.99:0,3,24	0/0:25,0:28:17.98:0,18,398	0/1:34,0:31:5.81:6,0,155	0/1:12,7:19:1.12:225,0,1	0/0:15,0:26:42.09:0,42,1138	0/0:11,0:18:10.09:0,10,164	0/0:14,0:24:11.98:0,12,350	0/0:12,0:12:12:0,12,231	0/0:9,0:19:15.02:0,15,361	0/0:18,0:32:51.14:0,51,1601	0/1:10,1:30:48.64:49,0,711	0/0:26,0:27:42.02:0,42,1093	0/0:17,0:29:30.54:0,31,886	1/1:19,12:30:24.32:514,24,0	1/1:11,11:23:7.55:581,8,0	0/1:18,1:19:41.25:111,0,41	0/0:11,0:23:18.80:0,19,494	0/0:19,0:21:30.07:0,30,897	0/0:10,0:13:21.04:0,21,604	0/0:13,0:27:36.11:0,36,1088	1/1:13,15:28:30.29:647,30,0	1/1:13,21:35:27.48:1067,27,0	1/1:2,0:1:3.01:56,3,0
chr10	92200993	.	AC	A	1384.90	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-2.266;DP=526;FS=14.719;HRun=9;HaplotypeScore=70.3090;InbreedingCoeff=0.8685;MQ=49.79;MQ0=39;MQRankSum=3.899;QD=6.18;ReadPosRankSum=1.258;VQSLOD=0.3032;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:58.54:0,59,550	0/0:12,0:12:34.51:0,35,284	0/0:42,0:3:3.89:0,4,32	0/0:34,0:4:2.70:0,3,15	0/0:21,0:22:38.20:0,38,362	1/1:21,0:21:18.67:122,19,0	1/1:13,1:14:17.07:118,17,0	1/1:20,0:17:35.47:254,35,0	0/0:6,0:6:12.24:0,12,73	1/1:18,1:18:27.91:167,28,0	1/1:12,1:12:8.52:69,9,0	1/1:11,0:9:7.93:46,8,0	1/1:15,0:15:9.97:83,10,0	1/1:6,2:8:13.85:115,14,0	0/0:17,0:16:38.32:0,38,341	1/1:24,2:25:23.96:207,24,0	0/0:34,0:33:52.26:0,52,605	1/1:16,0:15:8.49:38,8,0	0/0:14,0:14:35.84:0,36,306	0/0:12,0:11:23.03:0,23,161	0/0:15,0:12:16.90:0,17,111	1/1:20,0:19:8.86:77,9,0	1/1:10,4:14:13.51:129,14,0	1/1:13,0:13:2.11:24,2,0	1/1:12,2:13:15.11:151,15,0	0/0:17,0:16:42.77:0,43,298	0/0:20,0:21:39.44:0,39,313	0/0:14,0:12:26.83:0,27,223
chr10	92201002	.	CA	C	258.58	PASS	AB=0.951;AC=10;AF=0.179;AN=56;BaseQRankSum=-1.336;DP=577;FS=4.522;HRun=15;HaplotypeScore=85.8190;InbreedingCoeff=-0.0078;MQ=54.76;MQ0=37;MQRankSum=1.247;QD=1.50;ReadPosRankSum=-0.904;VQSLOD=-0.4880;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,4:39:34.39:0,34,375	0/0:13,1:14:4.56:0,5,131	0/0:49,0:8:0.49:0,0,20	0/0:39,0:7:0.67:0,1,12	0/1:29,0:29:55.55:56,0,73	0/0:21,0:22:47.51:0,48,361	0/0:16,0:17:2.12:0,2,133	0/1:21,1:20:41.55:42,0,76	0/0:7,0:6:1.74:0,2,14	0/0:20,0:19:36.48:0,36,268	0/0:20,0:19:23.08:0,23,170	0/0:13,0:11:22.80:0,23,150	0/0:14,0:14:17.24:0,17,123	0/0:10,0:10:10.41:0,10,70	0/1:17,1:17:10.75:11,0,161	0/0:27,1:27:26.76:0,27,313	0/0:30,0:29:40.26:0,40,443	0/0:16,0:14:29.77:0,30,238	0/1:14,0:15:3.28:3,0,91	0/1:13,1:13:10.46:64,0,10	1/1:13,1:12:6.17:48,6,0	0/0:20,0:19:34.63:0,35,236	0/0:20,0:21:35.12:0,35,266	0/0:12,0:12:14.37:0,14,130	0/1:12,0:12:5.40:5,0,67	0/1:21,2:22:4.40:120,0,4	0/1:22,1:23:42.44:42,0,80	0/0:13,0:12:10.77:0,11,55
chr10	92203209	.	A	AGGC	423.24	PASS	AC=4;AF=0.080;AN=50;BaseQRankSum=-1.155;DP=127;FS=0.000;HRun=0;HaplotypeScore=22.6656;InbreedingCoeff=0.4236;MQ=66.73;MQ0=1;MQRankSum=-0.603;QD=32.56;ReadPosRankSum=2.200;VQSLOD=3.4695;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:10.29:0,10,158	./.	0/0:6,0:5:11.96:0,12,129	0/0:5,0:3:3.48:0,3,37	0/0:1,0:1:3.01:0,3,48	0/0:3,0:3:6.02:0,6,81	0/0:10,0:10:24.01:0,24,309	0/0:1,0:1:3:0,3,29	0/0:3,0:3:9.03:0,9,139	0/0:4,0:4:9.03:0,9,145	./.	0/0:3,0:3:9.03:0,9,140	0/0:1,0:1:3.01:0,3,48	0/0:9,0:9:24.08:0,24,382	1/1:0,4:4:6.02:132,6,0	0/0:5,0:5:15.05:0,15,239	1/1:0,9:9:18.06:397,18,0	0/0:8,0:8:24.07:0,24,362	0/0:5,0:5:8.22:0,8,67	0/0:3,0:3:6.01:0,6,72	0/0:16,0:16:38.66:0,39,555	./.	0/0:1,0:1:3.01:0,3,46	0/0:7,0:7:21.06:0,21,310	0/0:5,0:3:9.03:0,9,126	0/0:6,0:6:10.79:0,11,152	0/0:4,0:4:12.04:0,12,185	0/0:1,0:1:3.01:0,3,48
chr10	92203912	.	G	GTTC	5182.26	PASS	AB=0.797;AC=17;AF=0.327;AN=52;BaseQRankSum=-4.254;DP=577;FS=13.797;HRun=0;HaplotypeScore=83.7263;InbreedingCoeff=0.4748;MQ=34.07;MQ0=154;MQRankSum=-7.559;QD=19.19;ReadPosRankSum=2.588;VQSLOD=3.7351;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:25:35.61:0,36,569	0/0:14,0:8:18.49:0,18,274	./.	./.	1/1:13,8:20:11.40:350,11,0	0/1:11,5:12:46.13:246,0,46	1/1:12,7:16:1.88:493,2,0	1/1:14,14:24:62.91:1205,63,0	1/1:8,4:8:0.79:124,1,0	0/0:33,0:19:42.04:0,42,602	0/0:16,0:12:21.03:0,21,322	0/0:10,0:8:14.87:0,15,195	0/0:10,0:9:22.81:0,23,289	0/0:17,0:11:27.05:0,27,419	0/0:18,0:13:18.50:0,18,274	0/1:16,5:11:2.15:185,0,2	0/0:36,0:21:36.04:0,36,498	0/0:33,0:26:42.42:0,42,601	1/1:18,9:22:32.03:831,32,0	0/1:18,4:17:31.71:210,0,32	0/0:10,0:5:2.97:0,3,20	0/0:12,0:8:24.08:0,24,407	0/0:12,0:8:17.76:0,18,305	0/0:17,0:11:14.79:0,15,224	0/0:19,0:17:36.06:0,36,551	1/1:13,10:14:32.99:687,33,0	0/1:26,11:35:99:659,0,106	0/1:29,7:28:99:193,0,166
chr10	92206711	.	AACACACACACACACACACACACACACACAC	A	1134.08	PASS	AB=0.782;AC=7;AF=0.130;AN=54;BaseQRankSum=3.922;DP=524;FS=3.075;HRun=0;HaplotypeScore=315.2836;InbreedingCoeff=0.2997;MQ=61.32;MQ0=11;MQRankSum=-0.652;QD=10.90;ReadPosRankSum=-0.652;VQSLOD=2.0149;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:42.14:0,42,4354	0/0:8,0:8:9.03:0,9,769	0/0:24,0:16:5.67:0,6,34	0/0:24,0:12:3.01:0,3,70	0/1:14,10:23:18.95:223,0,19	0/0:17,0:17:9.03:0,9,752	0/0:22,0:22:23.08:0,23,901	0/0:13,0:13:10.84:0,11,283	0/0:14,0:14:3.01:0,3,71	0/0:9,0:8:6.02:0,6,507	0/0:7,0:7:11.91:0,12,895	0/0:22,0:21:15.04:0,15,1216	0/0:14,0:13:18.93:0,19,1405	0/0:10,0:17:15.05:0,15,1707	0/0:23,0:26:33.11:0,33,3114	0/0:16,0:24:28.34:0,28,2409	0/0:20,0:23:33.11:0,33,2813	0/0:18,0:17:24.03:0,24,2250	0/0:11,0:11:2.50:0,2,9	./.	1/1:32,0:32:5.67:120,6,0	0/0:15,0:14:9.03:0,9,576	0/0:15,0:14:15:0,15,1362	0/0:33,0:33:33.93:0,34,3507	0/0:17,0:16:30.10:0,30,2781	0/1:18,9:27:99:121,0,334	0/1:14,2:16:3.34:562,0,3	1/1:3,2:4:3.01:229,3,0
chr10	92208646	.	C	CT	556.97	PASS	AB=0.879;AC=9;AF=0.161;AN=56;BaseQRankSum=-0.589;DP=324;FS=21.509;HRun=3;HaplotypeScore=37.6081;InbreedingCoeff=0.4465;MQ=44.60;MQ0=16;MQRankSum=3.204;QD=10.13;ReadPosRankSum=-0.730;VQSLOD=-0.2241;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:44.54:0,45,425	0/0:2,0:2:5.98:0,6,53	0/1:7,0:3:2.85:15,0,3	0/0:4,0:1:2.74:0,3,12	0/0:11,0:11:19.34:0,19,111	1/1:3,18:21:33.10:428,33,0	0/1:3,4:7:8.36:74,0,8	0/0:30,0:24:30.95:0,31,261	0/0:8,0:6:1.82:0,2,5	0/0:8,0:7:3.59:0,4,22	0/0:9,0:8:11.02:0,11,100	0/0:7,0:7:9.10:0,9,54	0/0:5,0:5:5.72:0,6,37	0/0:8,0:8:14.29:0,14,87	0/0:10,0:10:17.89:0,18,168	1/1:1,11:11:12.04:161,12,0	0/0:35,0:33:65.86:0,66,675	0/0:28,0:24:11.61:0,12,134	0/0:16,0:14:25.98:0,26,183	0/0:3,0:3:2.94:0,3,18	0/0:3,0:2:2.74:0,3,12	0/1:3,0:3:0:0,0,0	0/0:3,0:3:0.16:0,0,13	1/1:5,0:3:2.97:10,3,0	0/0:13,0:12:13.91:0,14,75	0/0:15,0:12:20.47:0,20,136	0/0:12,0:12:5.95:0,6,50	0/0:16,0:13:9.10:0,9,35
chr10	92208649	.	T	TA	1379.71	PASS	AB=0.861;AC=40;AF=0.714;AN=56;BaseQRankSum=0.981;DP=341;FS=5.497;HRun=15;HaplotypeScore=38.0295;InbreedingCoeff=0.4526;MQ=48.43;MQ0=14;MQRankSum=-1.428;QD=5.43;ReadPosRankSum=-1.888;VQSLOD=1.0711;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:27.70:0,28,160	0/0:2,0:2:2.92:0,3,17	0/1:7,0:4:4.61:5,0,15	0/0:5,0:2:1.49:0,1,4	1/1:13,0:15:13.43:61,13,0	1/1:22,0:24:17.13:162,17,0	1/1:6,0:6:8.70:50,9,0	1/1:17,13:27:8.49:251,8,0	1/1:2,0:7:5.74:30,6,0	0/1:4,4:7:2.53:86,0,3	0/1:7,1:7:9.08:35,0,9	1/1:4,5:9:5.99:51,6,0	1/1:3,2:5:3:25,3,0	1/1:6,2:8:5.99:51,6,0	0/0:7,0:9:12.59:0,13,74	1/1:12,0:12:11.59:65,12,0	0/0:32,0:31:60.07:0,60,350	1/1:14,16:26:8.97:184,9,0	1/1:13,1:14:4.49:47,4,0	0/1:2,0:2:0:0,0,0	1/1:0,0:2:2.84:14,3,0	1/1:2,3:5:5.99:50,6,0	1/1:3,1:4:3:25,3,0	1/1:1,3:3:5.99:50,6,0	1/1:6,6:11:18.37:140,18,0	1/1:8,0:13:11.40:58,11,0	0/0:2,0:13:2.73:0,3,13	1/1:6,0:16:19.89:99,20,0
chr10	92209850	.	CTCT	C	3708.39	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.705;DP=754;FS=3.982;HRun=0;HaplotypeScore=122.5965;InbreedingCoeff=0.9983;MQ=79.34;MQ0=0;MQRankSum=-3.479;QD=38.63;ReadPosRankSum=1.786;VQSLOD=4.5022;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,2453	0/0:12,0:12:36.12:0,36,792	0/0:20,0:20:50.67:0,51,948	0/0:16,0:16:39.13:0,39,807	0/0:23,0:23:66.23:0,66,1456	1/1:2,20:22:51.17:819,51,0	1/1:0,33:33:84.29:1348,84,0	0/0:31,0:31:87.30:0,87,1908	0/0:26,0:26:75.24:0,75,1599	0/0:28,0:28:84.29:0,84,1853	0/0:12,0:12:36.12:0,36,756	0/0:46,0:46:99:0,135,2961	0/0:25,0:25:72.25:0,72,1584	0/0:30,0:30:87.28:0,87,1861	0/0:44,0:44:99:0,126,2777	1/1:5,36:41:96.33:1542,96,0	0/0:21,0:21:57.18:0,57,1214	0/0:18,0:18:51.13:0,51,1023	0/0:12,0:12:33.11:0,33,728	0/0:14,0:14:42.14:0,42,922	0/0:55,0:55:99:0,157,3411	0/0:22,0:22:66.21:0,66,1411	0/0:18,0:18:54.16:0,54,1089	0/0:29,0:29:87.30:0,87,1917	0/0:32,0:32:90.29:0,90,1890	0/0:36,0:36:99:0,105,2277	0/0:41,0:41:99:0,120,2631	0/0:7,0:7:21.07:0,21,464
chr10	92210456	.	A	ATGAG	11647.19	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-0.306;DP=842;FS=13.298;HRun=0;HaplotypeScore=153.8720;InbreedingCoeff=0.9867;MQ=54.71;MQ0=21;MQRankSum=-3.495;QD=22.62;ReadPosRankSum=-0.248;VQSLOD=4.0824;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,102,1607	0/0:16,0:16:37.87:0,38,511	0/0:49,0:13:12.01:0,12,149	0/0:33,0:17:24.06:0,24,329	1/1:19,0:20:26.92:251,27,0	0/0:25,0:24:63.12:0,63,945	0/0:34,0:34:69.10:0,69,1014	1/1:16,17:33:51.15:1085,51,0	1/1:30,0:34:52.15:546,52,0	1/1:10,18:29:54.16:1233,54,0	1/1:3,15:18:33.11:664,33,0	1/1:12,18:31:27.09:624,27,0	1/1:6,30:37:45.15:1060,45,0	1/1:7,31:39:42.01:1018,42,0	0/0:46,0:46:99:0,99,1538	0/0:40,0:40:54.39:0,54,1316	0/0:38,0:38:51.44:0,51,1258	1/1:12,21:32:27.28:674,27,0	1/1:8,0:20:35.88:343,36,0	1/1:18,0:25:28.91:450,29,0	1/1:28,0:29:18.34:145,18,0	1/1:9,21:30:36.06:805,36,0	1/1:2,9:13:15.05:364,15,0	1/1:10,19:30:15.05:364,15,0	1/1:8,15:24:21.07:507,21,0	1/1:28,0:31:54.51:672,55,0	1/1:26,0:30:46.23:590,46,0	1/1:5,0:8:20.99:252,21,0
chr10	92210536	.	A	ATGAG	8144.60	PASS	AB=0.581;AC=15;AF=0.268;AN=56;BaseQRankSum=-8.434;DP=842;FS=1.174;HRun=0;HaplotypeScore=129.3137;InbreedingCoeff=0.8476;MQ=57.30;MQ0=5;MQRankSum=3.804;QD=30.05;ReadPosRankSum=1.733;VQSLOD=4.5864;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:83.37:0,83,1210	0/0:18,0:18:45.10:0,45,643	0/0:17,0:1:3.01:0,3,50	0/0:14,0:3:2.38:0,2,25	1/1:7,23:32:54.10:1034,54,0	0/0:35,0:35:84.23:0,84,1294	0/0:28,0:28:81.18:0,81,1265	0/0:47,0:47:84.19:0,84,1129	1/1:7,24:33:18.06:427,18,0	0/0:32,0:32:81.24:0,81,1231	0/0:17,0:17:33.09:0,33,495	0/0:30,0:30:72.22:0,72,1156	0/0:37,0:37:81.26:0,81,1316	0/0:27,0:27:66.19:0,66,1025	0/0:34,0:34:72.20:0,72,1118	0/0:41,0:41:99:0,105,1649	0/0:33,0:33:87.19:0,87,1357	0/0:26,0:26:57.12:0,57,873	1/1:19,1:17:32.94:577,33,0	1/1:5,35:41:96.32:2009,96,0	0/1:14,35:50:98.67:795,0,99	0/0:28,0:28:66.15:0,66,1016	0/0:23,0:23:51.10:0,51,776	0/0:26,0:26:38.73:0,39,970	0/0:22,0:22:48.12:0,48,702	1/1:13,24:38:48.16:1571,48,0	1/1:8,23:30:22.80:840,23,0	1/1:5,20:26:36.12:892,36,0
chr10	92211396	.	TAC	T	2252.05	PASS	AB=0.651;AC=22;AF=0.423;AN=52;BaseQRankSum=-2.118;DP=552;FS=3.800;HRun=0;HaplotypeScore=98.8761;InbreedingCoeff=0.6888;MQ=59.93;MQ0=14;MQRankSum=5.058;QD=10.14;ReadPosRankSum=4.849;VQSLOD=3.0232;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,12:21:9.02:99,9,0	1/1:3,4:7:6.49:67,6,0	./.	./.	1/1:8,11:20:11.86:114,12,0	0/0:12,0:20:11.99:0,12,103	0/0:25,0:32:27:0,27,249	0/0:28,0:27:29.99:0,30,323	1/1:4,7:12:11.87:113,12,0	0/0:27,0:27:29.81:0,30,237	0/0:7,0:13:2.53:0,3,12	0/0:16,0:16:9.01:0,9,105	0/0:18,0:17:8.98:0,9,103	0/0:7,0:11:3:0,3,26	1/1:7,16:24:15.12:385,15,0	0/0:8,0:16:15.01:0,15,147	1/1:10,18:29:38.94:412,39,0	0/0:20,0:22:14.96:0,15,148	1/1:12,2:14:9.02:100,9,0	1/1:7,10:17:15.04:166,15,0	0/1:18,15:32:21.42:208,0,21	0/0:8,0:8:8.99:0,9,83	0/0:11,0:14:2.72:0,3,12	0/0:13,0:26:20.88:0,21,197	0/0:13,0:12:11.95:0,12,102	0/1:5,9:16:8.25:255,0,8	1/1:9,11:20:29.82:331,30,0	1/1:1,6:9:20.72:194,21,0
chr10	92211799	.	A	AT	8641.32	PASS	AC=50;AF=0.962;AN=52;BaseQRankSum=-0.813;DP=238;FS=17.035;HRun=1;HaplotypeScore=237.4167;InbreedingCoeff=0.3648;MQ=28.87;MQ0=0;MQRankSum=1.918;QD=36.77;ReadPosRankSum=2.966;VQSLOD=0.9144;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:17.81:251,18,0	1/1:0,2:2:6.02:88,6,0	./.	./.	1/1:1,2:3:6.02:81,6,0	1/1:0,11:11:33.11:475,33,0	1/1:1,8:9:24.55:354,25,0	1/1:1,7:8:21.07:313,21,0	1/1:0,14:14:42.14:611,42,0	1/1:1,14:15:41.74:579,42,0	1/1:1,8:9:20.93:212,21,0	1/1:2,16:18:48.12:675,48,0	1/1:1,8:9:24.08:347,24,0	1/1:1,10:11:33.11:476,33,0	1/1:2,13:15:36.12:529,36,0	1/1:1,17:18:47.50:708,48,0	1/1:0,2:2:6.02:89,6,0	1/1:0,4:4:12.04:178,12,0	1/1:0,4:3:9.03:134,9,0	1/1:0,5:5:9.03:133,9,0	1/1:1,6:7:6.23:108,6,0	1/1:1,4:5:12.04:161,12,0	0/0:2,1:3:2.37:0,2,8	1/1:0,4:4:6.02:90,6,0	1/1:3,11:14:39.09:523,39,0	1/1:1,7:8:21.52:282,22,0	1/1:1,21:22:57.08:807,57,0	1/1:0,11:11:30.10:438,30,0
chr10	92211805	.	GC	G	7197.44	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=2.068;DP=206;FS=5.757;HRun=1;HaplotypeScore=181.6338;InbreedingCoeff=0.3044;MQ=33.82;MQ0=0;MQRankSum=-0.210;QD=35.11;ReadPosRankSum=2.399;VQSLOD=4.2154;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:6:18.05:218,18,0	1/1:0,2:2:6.02:82,6,0	./.	0/0:1,0:1:2.68:0,3,11	1/1:0,2:2:6.02:66,6,0	1/1:0,11:11:32.97:410,33,0	1/1:0,7:7:19.61:242,20,0	1/1:0,8:8:21.07:292,21,0	1/1:0,14:14:42.14:568,42,0	1/1:0,14:14:41.95:531,42,0	1/1:0,6:6:11.71:120,12,0	1/1:0,14:14:39.13:514,39,0	1/1:0,6:6:15.01:197,15,0	1/1:0,10:10:30.10:388,30,0	1/1:0,12:12:36.11:450,36,0	1/1:0,17:17:51.10:635,51,0	1/1:0,2:2:6.02:83,6,0	1/1:0,4:4:12.04:163,12,0	1/1:0,3:2:6.02:79,6,0	1/1:0,3:3:9.03:110,9,0	1/1:0,7:7:8.06:78,8,0	1/1:0,4:4:11.99:117,12,0	1/1:0,1:1:3.01:34,3,0	1/1:0,4:4:3.01:33,3,0	1/1:0,10:10:30.10:390,30,0	1/1:0,8:8:24.04:301,24,0	1/1:0,19:19:56.39:696,56,0	1/1:1,10:11:30.09:403,30,0
chr10	92212498	.	T	TA	7682.24	PASS	AB=0.850;AC=51;AF=0.911;AN=56;BaseQRankSum=-6.860;DP=578;FS=1.040;HRun=13;HaplotypeScore=64.3667;InbreedingCoeff=0.2745;MQ=72.21;MQ0=0;MQRankSum=-0.121;QD=14.25;ReadPosRankSum=1.004;VQSLOD=5.5768;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,103,689	1/1:1,7:9:17.86:154,18,0	0/1:15,1:16:17.93:18,0,56	0/1:9,0:7:6.41:6,0,38	1/1:8,21:30:30.37:384,30,0	1/1:6,16:22:16.87:310,17,0	1/1:5,8:13:0.44:147,0,0	1/1:12,17:30:29.44:421,29,0	1/1:3,10:13:21.02:195,21,0	1/1:7,20:27:63.01:568,63,0	1/1:4,23:29:55.80:493,56,0	1/1:3,14:17:12.46:258,12,0	1/1:6,13:19:0.86:285,1,0	1/1:3,7:10:12.01:111,12,0	1/1:8,11:21:17.08:256,17,0	1/1:6,18:23:18.43:308,18,0	1/1:8,24:33:12.31:487,12,0	1/1:4,15:20:15.31:272,15,0	1/1:1,15:17:27.24:365,27,0	1/1:6,26:33:51.26:589,51,0	1/1:2,8:11:17.86:154,18,0	1/1:7,15:23:49.87:415,50,0	1/1:5,12:17:23.98:215,24,0	1/1:2,4:6:6.01:56,6,0	1/1:8,20:29:36.32:467,36,0	1/1:8,15:23:41.92:362,42,0	0/1:10,18:28:46.85:301,0,47	1/1:2,1:9:14.37:85,14,0
chr10	92212873	.	ATCCTCG	A	11828.90	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=16.773;DP=691;FS=11.351;HRun=0;HaplotypeScore=156.0940;InbreedingCoeff=0.9985;MQ=81.47;MQ0=0;MQRankSum=-18.323;QD=57.70;ReadPosRankSum=1.245;VQSLOD=4.8844;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,166,5682	0/0:9,0:9:27.09:0,27,987	0/0:19,0:19:57.20:0,57,1764	0/0:25,0:25:66.23:0,66,2130	0/0:38,0:38:99:0,111,4013	0/0:23,0:23:69.22:0,69,2367	0/0:29,0:29:87.30:0,87,3068	0/0:27,0:27:75.25:0,75,2547	0/0:21,0:21:63.22:0,63,2211	1/1:2,24:26:72.25:1667,72,0	1/1:1,24:25:69.23:1510,69,0	1/1:1,23:24:63.22:1550,63,0	1/1:2,16:18:45.15:1107,45,0	1/1:0,13:13:36.12:886,36,0	0/0:15,0:15:45.15:0,45,1614	0/0:22,0:22:66.23:0,66,2402	0/0:39,0:39:99:0,114,4081	1/1:1,11:12:21.07:445,21,0	0/0:23,0:23:69.23:0,69,2346	0/0:38,0:38:99:0,114,4155	0/0:36,0:36:99:0,108,3805	1/1:0,21:21:60.20:1305,60,0	1/1:0,28:28:68.83:1530,69,0	1/1:1,14:15:21.07:517,21,0	1/1:0,23:23:54.19:1312,54,0	0/0:31,0:31:93.31:0,93,3250	0/0:24,0:24:72.25:0,72,2574	0/0:9,0:9:27.09:0,27,987
chr10	92216706	.	G	GGC	1231.26	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.330;DP=728;FS=2.702;HRun=0;HaplotypeScore=101.4047;InbreedingCoeff=0.9910;MQ=84.79;MQ0=0;MQRankSum=-0.624;QD=41.04;ReadPosRankSum=-3.183;VQSLOD=4.3113;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1812	0/0:14,0:14:39.13:0,39,574	0/0:27,0:27:69.22:0,69,953	0/0:19,0:19:53.75:0,54,687	0/0:22,0:22:63.20:0,63,908	0/0:19,0:19:54.17:0,54,771	0/0:37,0:37:99:0,108,1588	1/1:2,27:30:72.25:1326,72,0	0/0:29,0:29:84.28:0,84,1235	0/0:21,0:21:54.18:0,54,795	0/0:10,0:10:27.09:0,27,397	0/0:35,0:35:99:0,102,1502	0/0:26,0:26:78.26:0,78,1142	0/0:34,0:34:93.31:0,93,1367	0/0:31,0:31:93.31:0,93,1369	0/0:18,0:18:54.18:0,54,795	0/0:31,0:31:84.28:0,84,1236	0/0:22,0:22:63.20:0,63,905	0/0:27,0:27:72.24:0,72,1058	0/0:17,0:17:48.16:0,48,707	0/0:71,0:71:99:0,205,2973	0/0:29,0:29:84.28:0,84,1233	0/0:16,0:16:48.16:0,48,707	0/0:33,0:33:99:0,99,1457	0/0:15,0:15:45.15:0,45,662	0/0:27,0:27:78.26:0,78,1149	0/0:20,0:20:54.18:0,54,794	0/0:6,0:6:18.06:0,18,265
chr10	92217281	.	A	AG	3715.12	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-2.821;DP=519;FS=13.292;HRun=9;HaplotypeScore=85.9114;InbreedingCoeff=0.9388;MQ=79.85;MQ0=1;MQRankSum=-1.363;QD=18.67;ReadPosRankSum=-0.935;VQSLOD=2.5149;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:83.88:0,84,717	0/0:11,0:11:29.21:0,29,241	0/0:28,0:24:32.94:0,33,274	0/0:32,0:26:8.04:0,8,216	1/1:6,11:18:30.08:332,30,0	1/1:5,12:18:10.75:339,11,0	1/1:3,15:19:16.10:387,16,0	1/1:11,8:19:27.02:277,27,0	1/1:3,15:18:33.09:365,33,0	0/0:24,0:24:56.97:0,57,494	0/0:13,0:13:35.99:0,36,312	0/0:16,0:16:40.64:0,41,362	0/0:16,0:16:38.98:0,39,338	0/0:20,2:22:23.81:0,24,435	0/0:23,0:23:53.94:0,54,465	1/1:1,19:20:39.11:431,39,0	0/0:29,0:29:83.98:0,84,729	0/0:17,1:18:14.80:0,15,357	1/1:5,14:19:39.09:422,39,0	1/1:4,8:12:18.01:184,18,0	1/1:4,13:17:4.02:273,4,0	0/0:13,0:13:23.97:0,24,205	0/0:14,0:14:29.80:0,30,245	0/0:13,0:13:29.99:0,30,260	0/0:13,0:13:32.99:0,33,287	1/1:5,14:19:13.02:359,13,0	1/1:6,10:17:26.91:280,27,0	1/1:1,2:3:6.02:66,6,0
chr10	92217473	.	AG	A	7225.04	PASS	AB=0.536;AC=15;AF=0.268;AN=56;BaseQRankSum=14.211;DP=690;FS=9.806;HRun=3;HaplotypeScore=65.9135;InbreedingCoeff=0.9054;MQ=75.52;MQ0=0;MQRankSum=-0.601;QD=34.90;ReadPosRankSum=0.282;VQSLOD=4.8848;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,1964	0/0:10,0:10:30.10:0,30,431	0/0:13,0:13:32.89:0,33,376	0/0:11,0:11:24.03:0,24,267	1/1:0,16:16:48.15:595,48,0	0/0:23,0:23:66.21:0,66,929	0/0:38,0:38:99:0,105,1492	0/0:29,0:29:84.28:0,84,1208	1/1:0,25:25:69.22:855,69,0	0/0:13,0:13:36.12:0,36,519	0/0:9,0:9:27.09:0,27,387	0/0:38,0:38:99:0,114,1623	0/0:20,0:20:60.20:0,60,863	0/0:23,0:23:69.23:0,69,986	0/0:17,0:17:51.17:0,51,732	0/0:20,0:20:60.20:0,60,864	0/0:31,0:31:93.31:0,93,1339	0/0:34,0:34:99:0,102,1469	1/1:0,22:22:66.21:818,66,0	1/1:0,19:19:54.17:670,54,0	1/1:0,62:62:99:2232,181,0	0/0:21,0:21:63.19:0,63,872	0/0:24,0:24:69.22:0,69,975	0/0:32,0:32:96.32:0,96,1382	0/0:30,0:30:87.28:0,87,1234	0/1:4,26:30:42.40:866,0,42	1/1:1,27:28:81.25:1004,81,0	1/1:0,5:5:15.05:186,15,0
chr10	92222697	.	CCACCCAACA	C	3809.07	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.850;DP=654;FS=0.000;HRun=0;HaplotypeScore=181.6858;InbreedingCoeff=0.9968;MQ=81.19;MQ0=1;MQRankSum=-10.512;QD=56.02;ReadPosRankSum=-0.270;VQSLOD=3.3720;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,4828	0/0:7,0:7:21.07:0,21,999	0/0:36,0:32:80.86:0,81,2780	0/0:32,0:29:75.24:0,75,2719	0/0:16,0:16:42.14:0,42,1978	1/1:3,13:16:30.10:843,30,0	1/1:11,25:36:66.15:1882,66,0	0/0:20,0:20:54.19:0,54,2324	0/0:26,0:26:75.26:0,75,3237	0/0:16,0:16:45.63:0,46,2071	0/0:13,0:13:36.12:0,36,1529	0/0:33,0:33:88.53:0,89,3754	0/0:26,0:26:75.26:0,75,3325	0/0:32,0:32:93.31:0,93,3935	0/0:28,0:28:81.28:0,81,3754	1/1:2,14:16:36.12:1084,36,0	0/0:28,0:28:81.26:0,81,3584	0/0:14,0:14:39.13:0,39,1686	0/0:30,0:30:81.28:0,81,3582	0/0:15,0:15:45.15:0,45,1919	0/0:48,0:47:99:0,138,5958	0/0:22,0:22:57.67:0,58,2572	0/0:20,0:20:51.17:0,51,2205	0/0:22,0:22:66.20:0,66,2889	0/0:14,0:14:39.12:0,39,1708	0/0:24,0:24:69.24:0,69,2963	0/0:20,0:20:60.20:0,60,2627	0/0:7,0:7:21.07:0,21,1005
chr10	92222698	.	CACCCAACA	C	2167.22	PASS	AB=0.921;AC=4;AF=0.071;AN=56;BaseQRankSum=10.363;DP=661;FS=0.000;HRun=0;HaplotypeScore=175.1215;InbreedingCoeff=0.4060;MQ=80.40;MQ0=1;MQRankSum=-10.913;QD=31.87;ReadPosRankSum=0.210;VQSLOD=3.2147;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,4741	0/0:7,0:7:21.07:0,21,949	0/0:36,0:32:92.98:0,93,2744	0/0:31,0:28:78.22:0,78,2674	0/0:16,0:16:45.14:0,45,1902	0/1:15,1:16:26.12:485,0,26	0/1:32,4:36:39.07:1123,0,39	0/0:21,0:21:63.21:0,63,2324	0/0:27,0:27:81.28:0,81,3204	0/0:16,0:16:45.63:0,46,1953	0/0:13,0:13:39.13:0,39,1515	0/0:34,0:34:97.57:0,98,3747	0/0:26,0:26:78.27:0,78,3284	0/0:31,0:31:93.32:0,93,3802	0/0:29,0:29:87.21:0,87,3677	1/1:15,1:16:8.10:667,8,0	0/0:28,0:28:80.73:0,81,3405	0/0:14,0:14:42.14:0,42,1668	0/0:30,0:30:87.28:0,87,3502	0/0:15,0:15:45.15:0,45,1836	0/0:49,0:48:99:0,141,5751	0/0:23,0:23:63.68:0,64,2560	0/0:19,0:19:54.17:0,54,2149	0/0:23,0:23:69.24:0,69,2860	0/0:14,0:14:39.13:0,39,1653	0/0:25,0:25:75.25:0,75,3000	0/0:20,0:20:60.21:0,60,2520	0/0:7,0:7:21.07:0,21,957
chr10	92223536	.	C	CT	10327.41	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-17.282;DP=847;FS=0.000;HRun=1;HaplotypeScore=76.5378;InbreedingCoeff=1.0000;MQ=72.38;MQ0=0;MQRankSum=-1.117;QD=41.15;ReadPosRankSum=1.134;VQSLOD=5.2642;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,153,1967	0/0:17,0:17:48.16:0,48,623	0/0:25,0:25:75.14:0,75,918	0/0:25,0:25:63.66:0,64,800	1/1:0,29:29:78.26:1169,78,0	0/0:27,0:27:81.24:0,81,1024	0/0:31,0:31:93.29:0,93,1192	0/0:41,0:41:99:0,120,1527	1/1:0,34:34:87.29:1304,87,0	0/0:35,0:35:99:0,105,1363	0/0:18,0:18:51.17:0,51,662	0/0:31,0:31:90.29:0,90,1168	0/0:38,0:38:99:0,111,1441	0/0:33,0:33:96.31:0,96,1246	0/0:29,0:29:75.24:0,75,973	0/0:29,0:29:87.27:0,87,1116	0/0:26,0:26:75.24:0,75,973	0/0:26,0:26:75.23:0,75,955	1/1:1,19:20:60.20:899,60,0	1/1:0,23:23:66.22:989,66,0	1/1:4,56:60:99:2428,163,0	0/0:31,0:31:93.30:0,93,1201	0/0:25,0:25:75.24:0,75,972	0/0:37,0:37:99:0,111,1424	0/0:21,0:21:60.18:0,60,766	1/1:1,32:33:57.34:1335,57,0	1/1:1,36:37:99:1529,102,0	1/1:0,15:15:45.15:674,45,0
chr10	92225180	.	GA	G	7641.33	PASS	AB=0.955;AC=54;AF=0.964;AN=56;BaseQRankSum=1.183;DP=549;FS=4.690;HRun=1;HaplotypeScore=99.3045;InbreedingCoeff=0.0153;MQ=60.82;MQ0=1;MQRankSum=-1.299;QD=13.92;ReadPosRankSum=5.007;VQSLOD=4.4561;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:31:79.15:490,79,0	1/1:0,9:9:26.30:162,26,0	0/1:9,0:7:27.40:31,0,27	0/1:13,0:5:10.90:11,0,11	1/1:0,28:28:71.02:419,71,0	1/1:2,11:13:4.31:127,4,0	1/1:0,20:20:37.43:198,37,0	1/1:2,22:24:62.29:317,62,0	1/1:0,14:14:40.69:231,41,0	1/1:0,22:22:63.29:375,63,0	1/1:0,17:17:40.59:233,41,0	1/1:0,16:16:46.49:268,46,0	1/1:0,9:9:26.39:167,26,0	1/1:0,14:14:37.76:222,38,0	1/1:2,23:25:23.44:352,23,0	1/1:0,22:22:60.96:352,61,0	1/1:0,37:37:87.57:520,88,0	1/1:0,13:13:32.03:187,32,0	1/1:1,25:26:69.81:389,70,0	1/1:1,27:28:25.09:309,25,0	1/1:0,28:28:63.82:354,64,0	1/1:0,12:12:29.25:171,29,0	1/1:1,18:19:47.54:275,48,0	1/1:0,23:23:61.17:354,61,0	1/1:1,12:12:32.55:173,33,0	1/1:0,28:28:60.84:410,61,0	1/1:0,24:24:58.61:353,59,0	1/1:0,11:11:32.19:191,32,0
chr10	92225491	.	CT	C	2640.43	PASS	AB=0.575;AC=15;AF=0.268;AN=56;BaseQRankSum=7.929;DP=365;FS=8.608;HRun=9;HaplotypeScore=35.1714;InbreedingCoeff=0.8603;MQ=61.15;MQ0=1;MQRankSum=1.075;QD=20.63;ReadPosRankSum=1.398;VQSLOD=3.4179;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.14:0,63,711	0/0:3,0:2:6.02:0,6,69	0/0:8,0:8:13.73:0,14,137	0/0:1,0:1:3.01:0,3,32	1/1:1,12:13:35.97:321,36,0	0/0:18,0:16:42.12:0,42,485	0/0:13,0:13:30.09:0,30,346	0/0:23,0:21:30.08:0,30,338	1/1:1,10:11:30.01:275,30,0	0/0:9,0:9:24.03:0,24,256	0/0:17,0:17:39.10:0,39,440	0/0:13,0:13:30.09:0,30,346	0/0:12,0:12:36.09:0,36,404	0/0:7,0:7:18.05:0,18,208	0/0:17,0:17:48.13:0,48,544	0/0:11,0:11:21.06:0,21,242	0/0:13,0:12:30.09:0,30,346	0/0:10,0:10:27.08:0,27,311	1/1:2,12:14:36.01:329,36,0	1/1:3,13:16:38.91:335,39,0	1/1:3,12:15:30.01:275,30,0	0/0:8,0:8:18.04:0,18,198	0/0:10,0:10:24.07:0,24,277	0/0:11,0:11:33.10:0,33,381	0/0:9,0:8:24.07:0,24,277	0/1:6,17:22:12.23:398,0,12	1/1:0,23:23:60.03:549,60,0	1/1:0,13:13:39.02:357,39,0
chr10	92225825	.	G	GC	598.43	PASS	AC=36;AF=1.000;AN=36;DP=66;FS=0.000;HRun=0;HaplotypeScore=46.5448;InbreedingCoeff=-0.0415;MQ=27.56;MQ0=0;QD=9.65;VQSLOD=2.8977;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:6:16.40:70,16,0	./.	./.	./.	1/1:0,7:6:5.76:22,6,0	1/1:0,3:3:8.23:36,8,0	1/1:0,2:2:5.49:24,5,0	./.	1/1:0,3:3:8.23:36,8,0	1/1:0,2:1:3:27,3,0	1/1:0,4:4:10.33:40,10,0	1/1:0,2:2:5.49:24,5,0	1/1:0,1:1:2.80:13,3,0	1/1:0,4:4:8.17:35,8,0	./.	1/1:0,3:3:8.33:38,8,0	1/1:0,4:3:8.26:37,8,0	./.	1/1:0,4:4:11.88:81,12,0	./.	1/1:0,3:3:5.49:24,5,0	./.	./.	./.	1/1:0,1:1:2.74:12,3,0	1/1:0,6:5:14.71:90,15,0	1/1:0,5:5:5.70:29,6,0	1/1:0,2:2:5.90:37,6,0
chr10	92225827	.	GT	G	328.57	PASS	AC=36;AF=1.000;AN=36;DP=66;FS=0.000;HRun=1;HaplotypeScore=47.9676;InbreedingCoeff=0.0776;MQ=27.56;MQ0=0;QD=5.30;VQSLOD=0.4291;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:6:12:36,12,0	./.	./.	./.	1/1:0,7:6:3.52:11,4,0	1/1:0,3:3:6.11:19,6,0	1/1:0,2:2:4.07:12,4,0	./.	1/1:0,3:3:6.11:19,6,0	1/1:0,2:1:2.98:21,3,0	1/1:0,4:4:7.68:28,8,0	1/1:0,2:2:4.07:12,4,0	1/1:0,1:1:2.22:7,2,0	1/1:0,4:4:5.89:18,6,0	./.	1/1:0,3:3:6.45:21,6,0	1/1:0,4:3:6.23:20,6,0	./.	1/1:0,4:4:11.40:58,11,0	./.	1/1:0,3:3:4.07:12,4,0	./.	./.	./.	1/1:0,1:1:2.04:6,2,0	1/1:0,6:5:13.72:61,14,0	1/1:0,5:5:4.82:17,5,0	1/1:0,2:2:5.54:25,6,0
chr10	92227166	.	AC	A	8165.18	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=3.115;DP=455;FS=7.536;HRun=8;HaplotypeScore=51.0567;InbreedingCoeff=0.9028;MQ=70.52;MQ0=4;MQRankSum=-0.495;QD=21.49;ReadPosRankSum=4.354;VQSLOD=4.8696;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:69.11:0,69,778	1/1:2,6:8:21.03:203,21,0	0/0:20,0:10:26.90:0,27,288	0/0:22,0:14:10.02:0,10,244	1/1:5,12:17:32.39:306,32,0	1/1:0,12:12:33:309,33,0	1/1:7,17:24:45:418,45,0	1/1:7,11:18:29.93:273,30,0	1/1:2,10:12:27.04:261,27,0	1/1:1,14:15:42.06:405,42,0	1/1:3,11:14:24.03:232,24,0	1/1:3,10:13:27.04:260,27,0	1/1:3,14:17:36.04:342,36,0	1/1:3,12:15:36.06:347,36,0	1/1:2,5:7:14.99:137,15,0	1/1:0,15:15:39.06:376,39,0	1/1:2,40:42:98.87:955,99,0	1/1:1,15:16:42.07:405,42,0	1/1:3,9:12:24.03:232,24,0	1/1:1,13:14:35.91:319,36,0	1/1:2,19:21:51:480,51,0	1/1:3,5:8:11.97:106,12,0	1/1:1,13:14:29.99:280,30,0	1/1:1,13:14:33.05:319,33,0	1/1:2,7:9:21.03:203,21,0	1/1:0,13:13:39.06:376,39,0	1/1:12,16:27:62.96:592,63,0	1/1:0,2:2:3:29,3,0
chr10	92227528	.	ACG	A	6121.87	PASS	AB=0.993;AC=35;AF=0.648;AN=54;BaseQRankSum=-0.956;DP=587;FS=0.771;HRun=0;HaplotypeScore=80.2222;InbreedingCoeff=0.3320;MQ=70.69;MQ0=10;MQRankSum=0.745;QD=14.54;ReadPosRankSum=1.600;VQSLOD=4.3468;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:94.58:0,95,1751	1/1:2,4:6:6.02:75,6,0	./.	0/0:14,0:9:0.47:0,0,1	0/1:19,0:19:32.47:32,0,220	0/0:23,0:23:66.17:0,66,967	0/0:23,0:23:48.05:0,48,667	1/1:12,15:27:41.99:440,42,0	0/0:13,0:13:6.09:0,6,187	1/1:8,15:23:45.05:514,45,0	1/1:3,5:8:6.02:75,6,0	1/1:2,17:19:33.11:412,33,0	1/1:4,15:18:24.04:283,24,0	1/1:4,17:21:39.12:487,39,0	1/1:4,10:14:9.03:113,9,0	0/0:21,0:21:28.32:0,28,687	1/1:7,32:37:72.23:900,72,0	1/1:5,20:25:54.17:674,54,0	0/1:18,0:17:91.51:92,0,142	0/1:10,0:10:40.52:41,0,125	0/1:37,2:39:99:220,0,404	1/1:1,6:7:12.04:150,12,0	1/1:3,9:12:18.06:225,18,0	1/1:10,35:43:72.23:900,72,0	1/1:2,13:15:30.10:375,30,0	0/1:25,0:25:47.88:48,0,325	0/1:21,0:20:42.23:42,0,322	0/1:9,0:9:23.75:24,0,104
chr10	92227767	.	C	CAA	2694.51	PASS	AB=0.857;AC=36;AF=0.643;AN=56;BaseQRankSum=2.534;DP=485;FS=1.048;HRun=16;HaplotypeScore=74.7741;InbreedingCoeff=0.5605;MQ=45.23;MQ0=32;MQRankSum=-3.501;QD=7.81;ReadPosRankSum=-4.149;VQSLOD=-0.3145;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:45:50.72:0,51,493	0/0:5,0:4:2.73:0,3,22	0/1:18,0:6:20.01:20,0,25	0/1:8,0:1:0:0,0,0	0/1:11,8:21:34.29:234,0,34	0/0:14,0:17:26.09:0,26,218	0/1:15,0:15:8.20:8,0,126	0/0:10,0:22:46.19:0,46,218	1/1:3,7:11:8.70:111,9,0	1/1:13,1:22:35.14:294,35,0	0/1:9,0:8:0:1,0,0	1/1:12,0:13:26.70:219,27,0	1/1:9,0:14:6.85:49,7,0	1/1:15,0:14:17.46:102,17,0	0/0:14,0:14:19.81:0,20,154	0/0:12,0:11:28.79:0,29,205	0/0:16,0:19:41.23:0,41,287	1/1:13,6:21:27.07:308,27,0	1/1:17,3:20:21.64:173,22,0	1/1:7,5:13:17.42:192,17,0	0/1:3,0:4:3.30:23,0,3	1/1:9,0:11:7.40:98,7,0	1/1:8,0:11:12.01:113,12,0	1/1:2,0:5:2.99:28,3,0	1/1:4,1:10:12.02:121,12,0	1/1:14,9:25:40.94:366,41,0	1/1:9,11:25:26.48:209,26,0	1/1:16,7:24:6.21:211,6,0
chr10	92229579	.	A	ATGTGTG	5816.37	PASS	AB=1.000;AC=31;AF=0.596;AN=52;BaseQRankSum=-0.402;DP=626;FS=7.017;HRun=0;HaplotypeScore=179.1880;InbreedingCoeff=0.8571;MQ=62.24;MQ0=6;MQRankSum=-4.704;QD=16.71;ReadPosRankSum=-3.440;VQSLOD=3.3664;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:75.20:0,75,1390	0/0:14,0:14:24.02:0,24,415	0/0:25,0:18:12.04:0,12,244	0/0:27,0:21:18.06:0,18,339	1/1:16,7:24:11.75:361,12,0	0/0:5,0:17:30.10:0,30,418	0/0:12,0:24:39.12:0,39,528	0/0:28,0:28:28.82:0,29,531	1/1:10,15:26:33.11:1075,33,0	1/1:25,0:24:12.03:226,12,0	./.	1/1:29,0:29:17.99:318,18,0	1/1:20,0:20:12.03:215,12,0	1/1:19,0:18:6.01:164,6,0	0/0:36,0:41:87.27:0,87,1624	0/0:10,0:28:45.02:0,45,600	0/0:23,0:25:57.19:0,57,1108	1/1:14,0:14:12.04:215,12,0	1/1:11,6:16:27.05:625,27,0	1/1:6,3:8:3.01:98,3,0	1/1:28,10:41:17.72:520,18,0	1/1:15,0:14:2.99:24,3,0	0/1:21,0:20:0:0,0,0	1/1:23,0:23:12:154,12,0	1/1:19,0:19:5.97:181,6,0	1/1:14,7:23:37.64:821,38,0	1/1:14,5:22:32.45:819,32,0	./.
chr10	92230801	.	C	CA	5944.66	PASS	AC=18;AF=0.333;AN=54;BaseQRankSum=-11.402;DP=459;FS=1.682;HRun=1;HaplotypeScore=46.7323;InbreedingCoeff=0.9210;MQ=88.51;MQ0=0;MQRankSum=-1.274;QD=41.86;ReadPosRankSum=-0.756;VQSLOD=4.7129;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.19:0,69,863	0/0:5,0:5:9.03:0,9,117	0/0:13,0:13:35.61:0,36,402	0/0:20,0:20:54.14:0,54,669	1/1:0,2:2:3.01:45,3,0	0/0:14,0:14:42.14:0,42,545	0/0:19,0:19:57.19:0,57,740	1/1:0,22:22:63.21:944,63,0	1/1:0,12:12:36.12:539,36,0	0/0:7,0:7:18.06:0,18,234	0/0:3,0:3:9.03:0,9,117	0/0:25,0:25:75.23:0,75,960	0/0:23,0:23:69.22:0,69,895	0/0:31,0:31:93.30:0,93,1208	0/0:23,0:23:69.18:0,69,852	0/0:14,0:14:42.12:0,42,531	0/0:30,0:30:87.28:0,87,1128	0/0:28,0:28:84.27:0,84,1090	1/1:1,16:17:48.15:691,48,0	1/1:1,5:6:15.05:225,15,0	1/1:2,41:43:99:1883,126,0	./.	0/0:3,0:3:9.03:0,9,117	0/0:28,0:28:81.25:0,81,1037	0/0:6,0:6:15.03:0,15,168	1/1:0,16:16:45.11:629,45,0	1/1:0,22:22:59.98:898,60,0	1/1:0,2:2:6.02:90,6,0
chr10	92233738	.	AAAAAG	A	7812.47	PASS	AB=0.921;AC=21;AF=0.375;AN=56;BaseQRankSum=12.372;DP=553;FS=6.642;HRun=0;HaplotypeScore=124.5283;InbreedingCoeff=0.8745;MQ=66.70;MQ0=0;MQRankSum=-5.006;QD=37.92;ReadPosRankSum=1.946;VQSLOD=4.3974;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,3558	0/0:6,0:6:12.04:0,12,352	0/0:17,0:16:2.62:0,3,568	0/0:14,0:12:21.54:0,22,530	0/0:17,0:17:51.18:0,51,1405	0/0:15,0:15:42.13:0,42,1112	0/0:18,0:18:45.01:0,45,1207	0/0:23,0:23:60.20:0,60,1640	0/0:15,0:15:45.15:0,45,1230	1/1:1,31:32:90.28:1651,90,0	1/1:1,8:9:21.07:403,21,0	1/1:3,17:20:45.15:860,45,0	1/1:3,14:17:36.12:705,36,0	1/1:1,15:16:39.13:763,39,0	0/0:24,0:24:60.21:0,60,1732	0/0:21,0:21:63.21:0,63,1680	0/0:46,0:46:99:0,134,3650	1/1:2,18:20:9.34:1065,9,0	0/0:19,0:19:48.16:0,48,1272	0/0:20,0:20:54.19:0,54,1533	0/0:16,0:16:39.12:0,39,1101	1/1:2,12:14:33.06:606,33,0	1/1:1,7:8:18.06:342,18,0	1/1:4,14:18:33.07:640,33,0	1/1:1,16:17:39.07:718,39,0	0/1:32,3:35:60.68:61,0,2125	0/0:28,0:28:81.27:0,81,2248	0/0:3,0:3:9.03:0,9,215
chr10	92233783	.	C	CGT	1578.69	PASS	AB=0.931;AC=27;AF=0.500;AN=54;BaseQRankSum=-1.599;DP=662;FS=1.430;HRun=0;HaplotypeScore=157.5236;InbreedingCoeff=0.0619;MQ=59.60;MQ0=23;MQRankSum=3.404;QD=3.59;ReadPosRankSum=-0.514;VQSLOD=2.5679;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:46:47.10:0,47,441	0/1:4,2:6:16.72:123,0,17	0/1:49,0:17:0:0,0,0	./.	0/1:17,0:16:2.80:18,0,3	0/0:14,0:14:3.46:0,3,12	0/1:29,0:28:0.84:87,0,1	1/1:15,0:15:6.46:65,6,0	0/0:15,0:15:4.13:0,4,44	0/1:40,0:40:2.53:70,0,3	0/0:17,0:17:1.05:0,1,5	1/1:17,0:17:1.03:3,1,0	1/1:16,0:15:6.31:19,6,0	0/0:18,0:17:4.04:0,4,26	0/1:18,8:27:44.88:204,0,45	1/1:20,0:20:5.95:38,6,0	0/1:40,15:55:99:919,0,104	0/1:19,1:20:15.44:40,0,15	1/1:14,0:13:2.86:30,3,0	1/1:20,0:20:0.43:1,0,0	0/0:40,0:39:6.71:0,7,61	1/1:14,0:14:0.47:1,0,0	0/0:9,0:9:2.92:0,3,8	0/1:25,0:24:3.62:21,0,4	0/0:25,0:25:2.59:0,3,8	0/1:32,0:32:11.42:48,0,11	0/1:21,0:21:1.14:19,0,1	1/1:3,0:3:1.13:5,1,0
chr10	92233819	.	TGTAC	T	6009.08	PASS	AB=0.984;AC=24;AF=0.444;AN=54;BaseQRankSum=-9.714;DP=570;FS=12.053;HRun=0;HaplotypeScore=135.9834;InbreedingCoeff=-0.4234;MQ=53.19;MQ0=20;MQRankSum=0.112;QD=15.21;ReadPosRankSum=-6.465;VQSLOD=1.8508;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:51.03:0,51,1277	0/0:7,0:7:21.07:0,21,409	0/0:28,0:4:5.29:0,5,63	./.	0/1:13,0:13:86.74:97,0,87	0/1:15,0:14:78.41:123,0,78	0/1:37,0:37:76.74:763,0,77	1/1:17,0:16:36.11:511,36,0	0/1:23,0:23:98.50:395,0,98	0/1:24,1:25:40.72:459,0,41	0/1:13,1:14:44.91:117,0,45	0/1:20,0:20:42.92:308,0,43	0/1:10,0:10:17.50:187,0,18	0/1:21,1:22:69.63:389,0,70	0/0:16,0:16:24.08:0,24,512	0/1:21,0:21:99:278,0,119	0/0:49,0:49:99:0,127,2445	0/1:16,1:17:96.30:259,0,96	1/1:8,0:7:2.16:157,2,0	0/0:10,0:10:11.91:0,12,85	0/1:46,0:45:99:793,0,163	0/1:13,0:13:47.14:108,0,47	1/1:14,0:14:3.55:390,4,0	0/1:23,1:24:99:131,0,197	0/1:18,1:19:43.70:138,0,44	0/1:13,0:13:99:122,0,124	0/1:19,0:18:99:202,0,153	0/1:5,0:4:13.50:80,0,14
chr10	92233821	.	TAC	T	9564.74	PASS	AC=44;AF=0.815;AN=54;BaseQRankSum=-0.830;DP=543;FS=0.914;HRun=0;HaplotypeScore=102.0593;InbreedingCoeff=0.9272;MQ=53.96;MQ0=16;MQRankSum=-1.018;QD=24.34;ReadPosRankSum=-0.548;VQSLOD=5.4824;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:74.75:0,75,1208	0/0:6,0:7:20.65:0,21,271	0/0:26,0:4:5.29:0,5,63	./.	1/1:11,1:12:25.79:236,26,0	1/1:12,2:13:22.97:261,23,0	1/1:30,7:37:87.71:1126,88,0	1/1:3,15:17:45.09:582,45,0	1/1:19,3:22:21.19:518,21,0	1/1:20,2:22:54.82:681,55,0	1/1:10,2:12:19.79:240,20,0	1/1:18,3:21:37.35:470,37,0	1/1:9,2:11:28.87:354,29,0	1/1:19,2:21:30.42:462,30,0	0/0:14,0:14:32.99:0,33,435	1/1:18,3:21:49.90:538,50,0	0/0:45,2:47:15.57:0,16,1602	1/1:15,2:17:37.84:468,38,0	1/1:6,3:8:23.56:317,24,0	1/1:5,4:9:7.23:20,7,0	1/1:40,6:45:94.92:1249,95,0	1/1:10,1:11:14.51:142,15,0	1/1:12,1:13:32.53:530,33,0	1/1:22,2:24:30.85:308,31,0	1/1:13,3:16:19.51:242,20,0	1/1:13,0:13:26.01:293,26,0	1/1:18,1:18:41.35:393,41,0	1/1:4,1:4:9.92:138,10,0
chr10	92233822	.	ACG	A	3573.03	PASS	AB=0.992;AC=26;AF=0.464;AN=56;BaseQRankSum=-5.330;DP=551;FS=8.066;HRun=0;HaplotypeScore=122.8790;InbreedingCoeff=-0.2230;MQ=54.41;MQ0=14;MQRankSum=-0.803;QD=9.09;ReadPosRankSum=-3.571;VQSLOD=1.7863;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:79.22:0,79,1419	0/0:7,0:7:21.05:0,21,367	0/0:27,0:4:5.45:0,5,68	0/0:22,0:2:3.01:0,3,61	0/1:12,0:12:47.47:47,0,73	0/1:14,0:13:65.14:84,0,65	0/1:40,0:40:34:444,0,34	1/1:18,0:17:20.81:233,21,0	0/1:21,1:22:42.01:228,0,42	0/1:22,0:22:17.94:231,0,18	0/1:12,0:12:21.73:85,0,22	1/1:21,1:22:3.43:176,3,0	1/1:11,0:11:11:149,11,0	0/1:20,1:21:32.20:187,0,32	0/0:14,0:14:33.02:0,33,581	0/1:23,0:23:48.29:173,0,48	0/0:44,0:44:99:0,103,2227	0/1:18,0:18:56.64:157,0,57	1/1:9,0:8:6.85:132,7,0	0/0:9,0:9:11.83:0,12,77	0/1:46,0:45:94.61:468,0,95	0/1:12,0:12:35.59:36,0,40	1/1:13,0:13:36.20:257,36,0	0/1:24,1:25:99:104,0,145	0/1:16,0:16:30.96:116,0,31	0/1:14,0:14:67.79:69,0,68	0/1:18,0:17:92.98:119,0,93	0/1:5,0:4:8.87:77,0,9
chr10	92234308	.	G	GATC	20629.10	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-10.092;DP=490;FS=1.434;HRun=0;HaplotypeScore=71.5013;InbreedingCoeff=0.9828;MQ=83.26;MQ0=0;MQRankSum=-6.362;QD=53.58;ReadPosRankSum=1.669;VQSLOD=7.1756;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.21:0,72,1166	0/0:3,0:3:9.02:0,9,127	0/0:16,0:16:36.12:0,36,580	0/0:19,0:19:45.08:0,45,651	1/1:1,24:25:63.21:1298,63,0	1/1:2,20:22:51.17:1115,51,0	1/1:1,18:20:45.15:1016,45,0	1/1:4,24:28:81.26:1676,81,0	1/1:1,15:16:42.14:950,42,0	1/1:4,14:18:48.13:991,48,0	1/1:3,10:13:21.07:440,21,0	1/1:0,14:15:39.13:869,39,0	1/1:2,10:12:24.08:540,24,0	1/1:2,8:11:24.08:541,24,0	0/0:24,0:24:66.21:0,66,1098	1/1:2,21:23:63.22:1424,63,0	0/0:17,0:17:36.12:0,36,614	1/1:1,14:15:45.15:1017,45,0	1/1:2,18:21:57.20:1251,57,0	1/1:0,13:14:33.11:746,33,0	1/1:0,15:16:27.09:611,27,0	1/1:3,16:19:39.13:845,39,0	1/1:3,15:18:33.11:735,33,0	1/1:0,18:18:36.12:813,36,0	1/1:0,14:14:36.12:813,36,0	1/1:2,16:18:51.17:1115,51,0	1/1:2,21:24:66.23:1485,66,0	1/1:1,4:5:15.05:339,15,0
chr10	92234310	.	T	TCA	9664.68	PASS	AB=0.975;AC=42;AF=0.750;AN=56;BaseQRankSum=9.637;DP=487;FS=2.429;HRun=0;HaplotypeScore=96.1430;InbreedingCoeff=0.7587;MQ=80.30;MQ0=0;MQRankSum=-6.163;QD=25.10;ReadPosRankSum=3.936;VQSLOD=5.9220;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.24:0,75,1194	0/0:3,0:3:9.02:0,9,123	0/0:12,0:12:36.11:0,36,532	0/0:19,0:19:41.28:0,41,658	1/1:25,0:25:63.14:695,63,0	1/1:23,0:23:14:512,14,0	1/1:19,0:19:45.09:471,45,0	1/1:25,0:25:74.89:877,75,0	1/1:15,0:15:42.08:421,42,0	0/1:18,1:19:3.09:430,0,3	1/1:10,0:10:21.04:234,21,0	1/1:15,0:15:39.09:431,39,0	1/1:12,0:12:24.04:238,24,0	0/1:13,0:13:53.22:206,0,53	0/0:24,0:24:72.24:0,72,1151	1/1:22,1:23:28.85:618,29,0	0/0:17,0:17:39.13:0,39,625	1/1:17,0:17:42.08:441,42,0	1/1:23,1:24:0.73:602,1,0	1/1:12,0:12:33.06:331,33,0	1/1:17,0:17:27.04:274,27,0	1/1:18,0:18:4.80:416,5,0	1/1:18,0:18:33.05:358,33,0	1/1:18,0:18:36.08:381,36,0	1/1:14,0:14:36.07:380,36,0	1/1:18,0:18:51.11:549,51,0	1/1:25,0:25:32.50:637,32,0	1/1:4,1:5:15.03:164,15,0
chr10	92236459	.	A	AGTGTGTGTGTGTGT	8360.13	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=-4.271;DP=907;FS=12.129;HRun=0;HaplotypeScore=388.9161;InbreedingCoeff=0.4306;MQ=67.39;MQ0=6;MQRankSum=-5.372;QD=15.20;ReadPosRankSum=-3.987;VQSLOD=1.6931;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:41:56.84:0,57,1758	0/0:11,0:11:21.07:0,21,663	0/0:31,0:23:5.42:0,5,47	0/0:35,0:25:1.51:0,2,10	0/0:18,0:18:8.14:0,8,194	0/0:17,0:17:18.06:0,18,528	0/0:42,0:42:48.58:0,49,978	1/1:38,0:38:9.14:471,9,0	0/1:37,0:37:39.22:39,0,572	1/1:39,0:38:66.22:2011,66,0	1/1:10,0:10:2.99:24,3,0	1/1:49,0:48:47.08:1061,47,0	1/1:19,15:37:24.43:985,24,0	1/1:38,0:38:27.04:789,27,0	0/0:37,0:41:40.48:0,40,1871	0/0:44,0:44:78.15:0,78,1795	0/0:33,0:38:62.93:0,63,1861	1/1:29,0:29:41.71:1253,42,0	0/1:19,0:19:47.08:47,0,129	0/0:20,0:20:14.01:0,14,122	0/1:81,0:81:39.03:39,0,497	1/1:24,0:24:2.52:99,3,0	0/0:10,8:19:0.22:0,0,1	1/1:40,0:40:20.25:356,20,0	1/1:36,0:36:26:638,26,0	0/1:37,0:37:99:463,0,139	0/1:27,0:27:60.42:60,0,313	0/1:7,0:7:25.76:26,0,115
chr10	92236490	.	G	GTC	7564.34	PASS	AB=0.579;AC=23;AF=0.411;AN=56;BaseQRankSum=-3.515;DP=981;FS=0.998;HRun=0;HaplotypeScore=202.8691;InbreedingCoeff=0.8668;MQ=60.90;MQ0=6;MQRankSum=4.978;QD=17.76;ReadPosRankSum=4.121;VQSLOD=4.6067;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,117,1270	0/0:20,0:20:53.90:0,54,570	0/0:39,0:28:70.45:0,70,660	0/0:40,0:28:31.53:0,32,498	1/1:3,1:24:11.04:200,11,0	1/1:9,3:12:0.38:243,0,0	1/1:7,36:44:34.65:817,35,0	0/1:12,32:44:16.44:809,0,16	1/1:4,5:40:43.47:680,43,0	0/0:41,0:40:73.67:0,74,650	0/0:11,0:11:8.97:0,9,71	0/0:57,0:56:72.13:0,72,568	0/0:37,0:37:34.18:0,34,337	0/0:40,0:40:44.77:0,45,362	0/0:43,0:44:99:0,111,1238	1/1:25,18:44:43.96:1317,44,0	0/0:44,0:44:99:0,117,1273	0/0:23,0:23:30.13:0,30,242	1/1:3,0:21:59.65:564,60,0	1/1:5,0:23:17.78:213,18,0	1/1:9,6:100:68.23:929,68,0	0/0:23,0:23:20.45:0,20,165	0/0:13,0:13:11.98:0,12,98	0/0:43,0:43:22.49:0,22,295	0/0:34,0:34:28.26:0,28,222	1/1:2,1:37:89.63:1067,90,0	1/1:2,2:26:44.51:555,45,0	1/1:0,1:10:12.04:171,12,0
chr10	92237116	.	TG	T	4244.45	PASS	AB=0.937;AC=44;AF=0.786;AN=56;BaseQRankSum=1.668;DP=510;FS=15.117;HRun=13;HaplotypeScore=97.3985;InbreedingCoeff=0.6483;MQ=73.95;MQ0=2;MQRankSum=-0.677;QD=9.67;ReadPosRankSum=5.127;VQSLOD=2.4511;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:11.97:0,12,99	0/0:3,0:3:3:0,3,29	0/1:21,1:20:13.89:14,0,72	0/0:18,0:14:14.15:0,14,106	1/1:7,0:22:12.69:41,13,0	1/1:5,0:12:12.20:36,12,0	1/1:3,0:14:16.22:48,16,0	0/0:8,0:8:2.96:0,3,19	1/1:3,1:16:16.27:48,16,0	1/1:5,19:24:56.59:415,57,0	1/1:2,13:15:29.78:219,30,0	1/1:5,12:17:29.66:219,30,0	1/1:3,23:26:59.65:437,60,0	1/1:0,19:19:53.69:393,54,0	0/1:10,1:11:11.84:16,0,12	1/1:2,0:20:26.47:78,26,0	0/0:18,4:22:8.97:0,9,75	1/1:4,28:32:83.48:612,83,0	1/1:5,0:14:14.22:42,14,0	1/1:2,0:9:10.18:30,10,0	1/1:15,0:29:20.35:60,20,0	1/1:4,18:22:50.63:371,51,0	1/1:7,16:23:38.73:284,39,0	1/1:7,19:26:47.51:350,48,0	1/1:3,19:22:50.63:371,51,0	1/1:8,1:15:12.20:36,12,0	1/1:1,0:20:34.63:102,35,0	1/1:2,0:9:8.14:24,8,0
chr10	92237716	.	G	GA	10968.37	PASS	AB=0.730;AC=43;AF=0.768;AN=56;BaseQRankSum=-8.029;DP=689;FS=6.419;HRun=10;HaplotypeScore=82.3101;InbreedingCoeff=0.5462;MQ=73.91;MQ0=1;MQRankSum=-1.471;QD=19.66;ReadPosRankSum=2.075;VQSLOD=5.7053;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:51.74:0,52,416	0/1:9,1:10:2.02:2,0,191	0/0:43,0:31:37.13:0,37,297	0/1:29,0:18:11.55:12,0,118	1/1:5,32:38:71.28:915,71,0	1/1:3,15:18:30.08:320,30,0	1/1:5,19:25:44.98:462,45,0	1/1:4,28:32:53.50:756,54,0	1/1:2,13:16:35.96:367,36,0	1/1:10,27:37:80.94:801,81,0	1/1:2,14:16:38.32:439,38,0	1/1:2,21:23:51.13:543,51,0	1/1:5,13:19:5.24:315,5,0	1/1:3,20:23:42.10:444,42,0	0/0:31,0:31:62.83:0,63,514	1/1:8,22:30:59.98:621,60,0	0/0:28,0:30:69.95:0,70,550	1/1:5,23:28:63.16:672,63,0	1/1:4,11:15:9.62:275,10,0	1/1:1,17:18:51.09:530,51,0	0/1:4,11:15:10.66:284,0,11	1/1:6,21:27:32.37:534,32,0	0/1:3,9:12:9.61:113,0,10	1/1:3,18:21:18.38:420,18,0	1/1:2,24:27:59.98:622,60,0	1/1:2,29:31:59.30:791,59,0	1/1:5,30:35:41.53:647,42,0	0/1:4,6:10:12.60:84,0,13
chr10	92238839	.	CACCACCACCACCACCACT	C	1254.39	PASS	AB=1.000;AC=18;AF=0.333;AN=54;BaseQRankSum=-2.975;DP=250;FS=0.808;HRun=0;HaplotypeScore=92.8386;InbreedingCoeff=-0.1187;MQ=63.64;MQ0=9;MQRankSum=0.922;QD=10.72;ReadPosRankSum=-3.158;VQSLOD=1.0968;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:39.03:0,39,1239	./.	0/0:18,0:6:18.03:0,18,186	0/0:11,0:5:15.01:0,15,155	0/1:8,0:8:34.92:35,0,461	0/1:5,0:5:38.94:39,0,178	0/1:15,0:14:99:164,0,163	1/1:2,0:2:3:28,3,0	0/1:4,0:4:7.96:8,0,305	0/0:3,0:3:6.02:0,6,256	0/1:9,0:8:26.95:27,0,219	0/0:9,0:9:12.51:0,13,454	0/1:5,0:4:39.93:40,0,173	0/0:13,0:13:9.03:0,9,308	1/1:3,9:12:8.71:461,9,0	0/1:8,0:8:62.06:62,0,555	1/1:3,10:13:6.02:308,6,0	0/0:3,0:3:4.26:0,4,108	0/0:8,0:6:15.97:0,16,598	0/0:3,0:3:9.03:0,9,325	0/0:31,0:29:24.06:0,24,903	0/1:3,0:3:22.33:22,0,75	0/1:2,0:2:11.98:12,0,129	0/1:9,0:8:31.03:31,0,432	0/0:7,0:7:6.02:0,6,208	0/1:14,0:14:99:104,0,811	0/0:10,0:9:15.94:0,16,708	0/1:8,0:8:72.88:73,0,326
chr10	92238848	.	CACCACCACT	C	1586.54	PASS	AB=0.965;AC=35;AF=0.625;AN=56;BaseQRankSum=-2.310;DP=260;FS=3.522;HRun=0;HaplotypeScore=65.4554;InbreedingCoeff=0.0964;MQ=74.27;MQ0=9;MQRankSum=-1.219;QD=9.62;ReadPosRankSum=1.806;VQSLOD=0.8220;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:50.94:0,51,760	1/1:1,0:1:3:27,3,0	0/0:18,0:9:26.77:0,27,252	0/0:14,0:8:24:0,24,233	0/1:4,7:11:77.44:92,0,77	0/1:4,0:4:6.55:65,0,7	1/1:15,0:14:13.22:233,13,0	1/1:4,0:4:12.01:112,12,0	0/1:5,0:5:30.43:61,0,30	0/1:4,0:4:13:13,0,54	1/1:2,9:10:8.89:59,9,0	0/1:9,0:9:6.59:7,0,43	1/1:5,0:4:11.99:102,12,0	0/1:12,0:12:7.11:7,0,32	1/1:9,0:9:8.83:216,9,0	0/1:6,0:6:64.65:65,0,154	1/1:10,0:10:6.02:144,6,0	1/1:4,0:4:2.06:12,2,0	0/1:8,0:6:14.06:14,0,157	0/1:3,0:3:9.98:10,0,49	0/0:33,0:31:15.03:0,15,148	1/1:2,0:2:6:54,6,0	1/1:4,0:4:8.93:68,9,0	1/1:9,0:8:11.92:100,12,0	1/1:8,0:8:5.60:27,6,0	0/1:13,0:13:99:154,0,159	0/0:10,0:9:12.09:0,12,149	0/1:8,0:8:72.46:124,0,72
chr10	92238851	.	CACCACT	C	2287.71	PASS	AB=0.984;AC=46;AF=0.821;AN=56;BaseQRankSum=0.810;DP=270;FS=24.037;HRun=0;HaplotypeScore=55.0405;InbreedingCoeff=0.3061;MQ=75.80;MQ0=8;MQRankSum=-3.947;QD=10.45;ReadPosRankSum=2.859;VQSLOD=0.2673;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:50.94:0,51,646	1/1:1,0:1:3:27,3,0	0/0:18,0:9:26.78:0,27,255	0/0:15,0:9:26.99:0,27,255	0/1:11,0:11:1.93:96,0,2	1/1:4,0:4:11.99:103,12,0	1/1:14,0:14:35.83:307,36,0	1/1:4,0:4:12.01:112,12,0	1/1:7,0:7:14.95:121,15,0	1/1:4,0:4:2.98:22,3,0	1/1:10,0:9:5.92:39,6,0	1/1:2,7:9:2.22:69,2,0	1/1:5,0:4:11.99:102,12,0	1/1:1,12:13:3.01:70,3,0	1/1:9,0:9:9.03:153,9,0	0/1:7,0:7:55.90:91,0,56	1/1:10,0:10:6.02:103,6,0	1/1:1,4:5:2.98:70,3,0	0/1:7,0:5:17.65:18,0,47	1/1:3,0:3:7.40:33,7,0	1/1:38,0:36:10.23:33,10,0	1/1:3,0:3:9:81,9,0	1/1:5,0:5:11.94:95,12,0	1/1:9,0:8:14.72:127,15,0	1/1:0,8:8:6.02:140,6,0	0/1:14,1:15:4.26:291,0,4	1/1:10,0:9:2.72:8,3,0	1/1:8,0:8:3.53:130,4,0
chr10	92238854	.	CACT	C	2838.88	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=0.902;DP=259;FS=20.458;HRun=0;HaplotypeScore=40.8934;InbreedingCoeff=0.5158;MQ=80.19;MQ0=6;MQRankSum=-5.484;QD=13.85;ReadPosRankSum=2.198;VQSLOD=1.4598;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:53.94:0,54,570	1/1:2,0:2:6:52,6,0	0/0:19,0:10:29.79:0,30,284	0/0:16,0:10:29.97:0,30,277	1/1:9,1:10:20.77:167,21,0	1/1:4,0:4:11.99:103,12,0	1/1:13,0:13:36.32:307,36,0	1/1:7,0:7:21.02:194,21,0	1/1:5,0:5:14.95:121,15,0	1/1:3,0:3:5.99:51,6,0	1/1:9,0:9:5.92:39,6,0	1/1:7,0:7:2.73:31,3,0	1/1:5,0:4:11.99:102,12,0	1/1:12,0:12:3.01:31,3,0	1/1:9,0:9:9.02:90,9,0	0/1:7,0:7:13.65:111,0,14	1/1:10,0:10:6.01:61,6,0	1/1:5,0:5:3.48:33,3,0	1/1:7,0:5:5.99:54,6,0	1/1:0,3:3:8.98:121,9,0	1/1:1,33:33:15.05:256,15,0	1/1:3,0:3:9:81,9,0	1/1:5,0:5:14.94:122,15,0	1/1:7,0:6:14.98:127,15,0	1/1:8,0:8:6.01:63,6,0	1/1:1,13:14:38.97:377,39,0	1/1:1,6:6:5.76:102,6,0	1/1:9,0:9:23.94:196,24,0
chr10	92239543	.	G	GC	6809.58	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-9.068;DP=659;FS=12.384;HRun=6;HaplotypeScore=104.4785;InbreedingCoeff=0.9678;MQ=82.97;MQ0=0;MQRankSum=-2.344;QD=24.06;ReadPosRankSum=3.843;VQSLOD=3.6906;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:54.12:0,54,551	1/1:7,0:7:9.38:66,9,0	0/0:19,0:19:42.07:0,42,422	0/0:21,0:21:42.74:0,43,496	0/0:16,0:16:39.08:0,39,397	0/0:23,0:23:60.14:0,60,611	0/0:32,0:32:84.18:0,84,855	0/0:22,0:21:45.04:0,45,442	0/0:24,0:23:51.10:0,51,518	1/1:3,17:20:45.14:565,45,0	1/1:1,9:10:18.06:226,18,0	1/1:4,29:33:72.23:905,72,0	1/1:1,27:28:76.13:945,76,0	1/1:2,25:27:66.21:830,66,0	1/1:1,0:18:4.45:98,4,0	0/0:25,0:25:54.12:0,54,551	1/1:2,0:38:57.93:311,58,0	1/1:3,26:29:78.25:980,78,0	0/0:25,0:25:63.12:0,63,632	0/0:14,0:14:33.07:0,33,336	0/0:55,0:55:99:0,135,1374	1/1:1,14:15:33.11:415,33,0	1/1:4,13:17:23.91:302,24,0	1/1:1,23:24:53.84:679,54,0	1/1:1,15:16:39.12:488,39,0	0/0:45,1:46:73.45:0,73,1052	0/0:25,0:25:69.15:0,69,702	0/0:6,0:6:12.03:0,12,122
chr10	92239602	.	CTGTG	C	440.88	PASS	AB=0.949;AC=14;AF=0.304;AN=46;BaseQRankSum=1.420;DP=702;FS=0.876;HRun=0;HaplotypeScore=184.9669;InbreedingCoeff=0.2805;MQ=61.25;MQ0=20;MQRankSum=-1.264;QD=1.46;ReadPosRankSum=0.000;VQSLOD=2.4136;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,12:23:8.57:251,9,0	0/0:6,0:7:1.72:0,2,4	./.	./.	./.	1/1:22,0:22:5.64:27,6,0	0/1:28,0:27:4.44:11,0,4	0/0:42,0:38:19.19:0,19,136	1/1:22,0:21:3:25,3,0	0/0:31,0:30:1.24:0,1,195	./.	0/0:26,0:26:19:0,19,187	0/0:19,0:18:15.43:0,15,168	0/0:24,0:23:12.01:0,12,98	0/1:21,0:25:0.57:93,0,1	0/0:20,0:20:2.50:0,2,9	0/1:25,0:29:7.84:22,0,8	0/0:24,0:22:18.32:0,18,191	0/0:23,0:21:17.06:0,17,123	./.	0/1:78,0:76:2.10:2,0,70	0/0:21,0:21:15.46:0,15,159	0/0:13,0:12:2.61:0,3,41	0/0:28,0:29:14.62:0,15,141	0/0:22,0:21:7.84:0,8,77	0/1:46,0:44:25.62:66,0,26	0/1:18,0:16:14.44:61,0,14	1/1:8,0:8:2.96:19,3,0
chr10	92239618	.	GTGTGTGTGTGTGTGTGTGTGTGTGTC	G	577.89	PASS	AB=0.943;AC=10;AF=0.185;AN=54;BaseQRankSum=-2.166;DP=738;FS=0.762;HRun=0;HaplotypeScore=364.8328;InbreedingCoeff=0.1446;MQ=53.14;MQ0=33;MQRankSum=1.385;QD=2.14;ReadPosRankSum=1.135;VQSLOD=0.9334;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:39.59:0,40,1808	0/0:10,0:10:0.86:0,1,150	0/0:16,0:9:5.97:0,6,71	0/1:19,0:14:14.31:14,0,84	0/1:16,0:16:0:0,0,0	0/1:18,0:18:10.20:132,0,10	1/1:26,0:21:21.05:423,21,0	0/0:34,0:29:49.66:0,50,418	0/1:30,0:29:16.76:17,0,17	0/0:36,0:34:80.67:0,81,1358	./.	0/0:25,0:25:33.01:0,33,708	0/0:20,0:18:33.64:0,34,800	0/0:29,0:27:17.93:0,18,237	0/0:32,0:30:10.66:0,11,1152	0/1:4,21:25:1.59:2,0,6	0/1:26,0:26:2.24:2,0,996	0/0:27,0:25:23.51:0,24,1563	0/0:28,0:25:48.92:0,49,838	0/1:20,0:19:8.56:41,0,9	0/1:89,0:81:77.38:77,0,274	0/0:22,0:22:20.98:0,21,389	0/0:17,0:13:9:0,9,216	0/0:38,0:38:44.44:0,44,1540	0/0:23,0:22:26.96:0,27,663	0/0:48,0:43:49.53:0,50,1199	0/0:18,0:16:17.62:0,18,269	0/0:10,0:9:2.88:0,3,15
chr10	92239634	.	G	GTGTGTC	1755.29	PASS	AB=1.000;AC=23;AF=0.479;AN=48;BaseQRankSum=0.516;DP=752;FS=2.386;HRun=0;HaplotypeScore=204.0637;InbreedingCoeff=-0.0803;MQ=47.80;MQ0=31;MQRankSum=-1.515;QD=3.32;ReadPosRankSum=-0.791;VQSLOD=2.5853;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:38.37:0,38,418	1/1:10,0:9:8.62:90,9,0	./.	./.	1/1:20,0:20:1.55:4,2,0	1/1:14,0:14:2.84:15,3,0	0/1:33,0:28:21.27:21,0,99	0/0:36,0:28:41.73:0,42,303	1/1:29,0:28:2.33:18,2,0	0/1:39,0:37:83.56:146,0,84	./.	0/1:25,0:25:42.21:42,0,200	0/1:25,0:23:99:203,0,105	0/1:30,0:28:11.74:12,0,46	1/1:32,3:35:44.88:521,45,0	0/0:23,0:23:5.70:0,6,38	1/1:24,2:26:37.40:392,37,0	0/1:24,0:23:99:209,0,161	0/0:26,0:23:39.69:0,40,271	./.	0/1:101,0:93:22.83:23,0,31	0/1:26,0:26:8.99:9,0,90	0/1:17,0:13:39.19:41,0,39	0/1:46,0:46:99:140,0,144	0/1:25,0:24:20.69:21,0,95	0/0:45,0:40:35.22:0,35,382	0/0:18,0:16:2.14:0,2,87	0/0:9,0:8:2.94:0,3,18
chr10	92239636	.	GTGTGTGTC	G	2117.07	PASS	AB=1.000;AC=26;AF=0.542;AN=48;BaseQRankSum=-4.648;DP=746;FS=3.910;HRun=0;HaplotypeScore=204.2318;InbreedingCoeff=-0.3076;MQ=47.68;MQ0=32;MQRankSum=0.431;QD=3.42;ReadPosRankSum=-3.267;VQSLOD=1.7334;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:48.66:0,49,483	0/0:11,0:10:2.03:0,2,65	./.	./.	0/0:20,0:20:0.47:0,0,1	1/1:15,0:15:8.74:71,9,0	1/1:34,0:29:29.88:269,30,0	0/1:31,0:23:15.43:176,0,15	1/1:30,1:30:2.75:81,3,0	0/1:37,0:35:99:192,0,142	./.	0/1:24,0:24:27.54:28,0,169	0/1:24,0:22:21.47:21,0,156	0/1:28,0:26:23.29:28,0,23	0/1:36,0:34:72.04:72,0,394	0/1:23,0:23:4.77:19,0,5	0/0:27,0:27:5.44:0,5,295	0/1:23,0:21:46.39:46,0,313	0/1:25,0:22:23.17:145,0,23	./.	0/1:100,0:92:99:110,0,109	0/1:26,0:26:35.07:45,0,35	0/1:17,0:13:16.01:16,0,35	0/1:48,0:47:32.29:32,0,274	0/1:24,0:23:30.96:31,0,105	1/1:44,2:40:63.31:683,63,0	1/1:17,1:17:12.50:173,12,0	1/1:9,0:8:2.99:24,3,0
chr10	92239638	.	GTGTGTC	G	2579.43	PASS	AB=0.911;AC=32;AF=0.667;AN=48;BaseQRankSum=-4.077;DP=737;FS=12.978;HRun=0;HaplotypeScore=193.5425;InbreedingCoeff=-0.2847;MQ=47.82;MQ0=32;MQRankSum=-0.579;QD=3.86;ReadPosRankSum=-2.426;VQSLOD=1.4755;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:14.79:0,15,329	0/1:11,0:10:25.25:25,0,60	./.	./.	0/1:3,18:21:0.02:0,0,0	1/1:15,0:15:8.85:71,9,0	1/1:34,0:29:31.91:232,32,0	0/1:29,0:22:9.42:196,0,9	1/1:5,25:30:2.73:49,3,0	0/1:36,0:34:59.97:145,0,60	./.	0/1:25,0:25:18.15:18,0,51	0/1:24,0:22:8.43:8,0,101	1/1:28,0:26:8.44:50,8,0	0/1:35,0:33:99:153,0,303	1/1:23,0:23:2.27:24,2,0	0/1:28,0:28:99:183,0,231	0/1:23,0:21:77.97:78,0,188	0/1:12,12:21:2.93:207,0,3	./.	0/1:19,78:89:46.49:46,0,87	1/1:25,0:25:1.85:41,2,0	0/1:17,0:13:1.11:20,0,1	0/1:49,0:48:35.99:36,0,163	0/1:24,0:23:38.70:39,0,44	1/1:11,35:40:72.17:830,72,0	1/1:4,12:14:10.61:202,11,0	1/1:1,8:8:3.01:64,3,0
chr10	92239642	.	GTC	G	2941.70	PASS	AB=0.958;AC=34;AF=0.708;AN=48;BaseQRankSum=-2.923;DP=742;FS=16.472;HRun=0;HaplotypeScore=177.3717;InbreedingCoeff=-0.1312;MQ=47.71;MQ0=33;MQRankSum=0.656;QD=4.37;ReadPosRankSum=-2.747;VQSLOD=1.2796;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:16.37:0,16,268	0/1:12,0:11:2.54:3,0,83	./.	./.	0/1:20,0:21:0:0,0,0	1/1:16,1:17:11.84:95,12,0	1/1:34,0:29:35.84:284,36,0	0/1:14,15:20:2.20:242,0,2	1/1:29,1:30:3.01:43,3,0	1/1:36,0:34:31.70:312,32,0	./.	0/1:25,1:26:11.39:98,0,11	1/1:21,1:20:0.46:109,0,0	1/1:25,2:25:8.47:90,8,0	0/1:35,0:33:51.91:52,0,258	0/1:23,0:23:3.44:19,0,3	0/1:27,1:28:66.58:67,0,168	0/1:24,0:22:29.50:133,0,29	0/1:21,0:18:16.08:203,0,16	./.	0/1:96,1:88:38.76:41,0,39	0/1:24,1:25:6.98:100,0,7	0/1:18,0:14:12.19:15,0,12	1/1:48,2:49:4.26:176,4,0	1/1:24,1:24:8.65:141,9,0	1/1:47,1:41:88.05:725,88,0	1/1:15,1:15:13.75:108,14,0	1/1:9,0:8:2.99:23,3,0
chr10	92240681	.	G	GA	6662.60	PASS	AB=0.800;AC=28;AF=0.500;AN=56;BaseQRankSum=-4.915;DP=638;FS=1.929;HRun=9;HaplotypeScore=98.1139;InbreedingCoeff=0.7174;MQ=63.81;MQ0=20;MQRankSum=-2.450;QD=18.51;ReadPosRankSum=-0.935;VQSLOD=4.4619;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,108,937	1/1:4,10:13:29.87:310,30,0	0/1:29,0:12:25.23:25,0,169	0/1:22,0:10:12.80:13,0,71	1/1:3,17:19:32.92:346,33,0	1/1:0,15:16:38.94:412,39,0	1/1:2,19:19:42.11:465,42,0	1/1:8,24:32:77.82:809,78,0	1/1:5,13:19:38.94:412,39,0	0/0:27,0:27:61.32:0,61,492	0/0:25,0:25:59.97:0,60,520	0/0:19,0:19:50.94:0,51,443	0/0:21,0:21:50.96:0,51,439	0/0:28,0:28:77.97:0,78,676	1/1:6,18:24:40.11:662,40,0	1/1:3,10:12:21.06:232,21,0	1/1:4,22:26:62.76:674,63,0	0/0:26,0:26:65.97:0,66,573	1/1:11,23:32:62.92:650,63,0	1/1:8,10:17:27.07:298,27,0	0/1:3,8:11:30.56:145,0,31	0/0:18,0:18:50.98:0,51,442	0/0:19,0:19:47.96:0,48,413	0/0:18,0:18:47.92:0,48,409	0/0:19,0:19:44.96:0,45,390	0/1:14,22:32:26.04:641,0,26	1/1:3,18:21:54.06:569,54,0	0/0:13,0:13:32.94:0,33,279
chr10	92240747	.	T	TGAG	30744.97	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-11.268;DP=714;FS=6.175;HRun=0;HaplotypeScore=97.8412;InbreedingCoeff=0.9988;MQ=79.81;MQ0=0;MQRankSum=-6.440;QD=54.13;ReadPosRankSum=4.299;VQSLOD=7.2927;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1841	1/1:1,14:16:39.13:868,39,0	0/0:20,0:20:57.05:0,57,864	0/0:20,0:20:48.15:0,48,750	1/1:2,21:23:48.13:1042,48,0	0/0:22,0:22:57.18:0,57,921	0/0:36,0:36:75.26:0,75,1249	1/1:3,19:22:63.20:1289,63,0	1/1:3,19:23:60.03:1314,60,0	1/1:0,29:30:90.24:1846,90,0	1/1:0,14:14:30.10:679,30,0	1/1:2,35:37:99:2241,99,0	1/1:2,20:22:45.15:1019,45,0	1/1:3,34:38:96.33:2171,96,0	1/1:5,26:31:75.20:1632,75,0	0/0:10,0:10:21.07:0,21,347	1/1:4,26:30:72.23:1586,72,0	1/1:2,36:38:92.99:2094,93,0	1/1:5,21:27:69.19:1507,69,0	1/1:3,13:16:29.99:548,30,0	1/1:3,27:31:68.83:1520,69,0	1/1:5,19:24:48.16:1087,48,0	1/1:0,23:23:57.20:1291,57,0	1/1:3,29:31:78.06:1766,78,0	1/1:0,13:14:33.11:747,33,0	1/1:8,36:44:99:2670,126,0	1/1:2,16:18:48.16:1082,48,0	1/1:3,11:14:33.11:746,33,0
chr10	92245528	.	ACACG	A	2196.24	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.813;DP=661;FS=0.564;HRun=0;HaplotypeScore=106.6207;InbreedingCoeff=0.9858;MQ=62.39;MQ0=1;MQRankSum=1.275;QD=26.46;ReadPosRankSum=3.860;VQSLOD=3.6320;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:87.20:0,87,2031	1/1:4,9:13:21.04:324,21,0	0/0:42,0:31:51.10:0,51,920	0/0:25,0:21:33.10:0,33,616	0/0:14,0:14:30.10:0,30,741	0/0:17,0:17:39.09:0,39,867	0/0:23,0:23:48.12:0,48,1013	0/0:27,0:27:60.06:0,60,1303	0/0:20,0:20:48.10:0,48,1055	0/0:19,0:19:36.11:0,36,790	0/0:15,0:15:30.10:0,30,738	0/0:22,0:22:54.19:0,54,1306	0/0:22,0:22:54.17:0,54,1257	0/0:23,0:23:54.19:0,54,1313	1/1:4,16:20:45.15:755,45,0	0/0:12,0:12:30.10:0,30,741	1/1:16,34:49:75.26:1259,75,0	0/0:30,0:30:75.24:0,75,1772	0/0:26,0:24:36.54:0,37,787	0/0:14,0:14:36.12:0,36,873	0/0:52,0:52:99:0,123,2828	0/0:8,0:8:15.05:0,15,371	0/0:20,0:20:48.15:0,48,1132	0/0:45,0:45:90.25:0,90,2125	0/0:15,0:15:27.04:0,27,551	0/0:16,0:16:27.07:0,27,617	0/0:24,0:23:66.16:0,66,1515	0/0:7,0:7:15.05:0,15,371
chr10	92246703	.	G	GC	2916.42	PASS	AB=0.693;AC=33;AF=0.589;AN=56;BaseQRankSum=-4.701;DP=443;FS=20.440;HRun=10;HaplotypeScore=45.3769;InbreedingCoeff=0.1223;MQ=78.14;MQ0=0;MQRankSum=-0.372;QD=8.73;ReadPosRankSum=-0.389;VQSLOD=0.2967;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,1:21:35.90:0,36,295	0/0:5,0:5:8.98:0,9,74	0/0:19,0:19:9.57:0,10,152	0/1:14,0:12:2.48:2,0,81	1/1:4,7:11:15.04:160,15,0	1/1:3,7:10:9.02:96,9,0	0/1:10,13:23:13.19:284,0,13	1/1:11,5:16:15.04:160,15,0	1/1:1,8:9:12.03:128,12,0	1/1:4,1:5:3:28,3,0	1/1:8,1:9:11.92:103,12,0	0/1:7,9:16:34.16:52,0,34	0/1:2,9:11:34.19:81,0,34	0/1:7,8:16:0.58:198,0,1	0/0:26,0:26:50.89:0,51,418	1/1:6,15:21:8.43:288,8,0	0/0:29,1:30:65.60:0,66,541	0/1:7,15:22:24.75:169,0,25	0/1:12,5:17:28.23:139,0,28	0/1:3,4:7:18.62:26,0,19	1/1:16,16:33:2.35:216,2,0	0/1:7,4:11:22.90:23,0,40	1/1:1,5:6:9:86,9,0	0/1:15,14:30:56.61:261,0,57	0/1:8,4:12:37.26:52,0,37	1/1:6,6:12:9.02:96,9,0	1/1:6,17:23:42.11:447,42,0	0/0:8,0:8:2.96:0,3,25
chr10	92246947	.	TTC	T	119.50	PASS	AB=0.913;AC=6;AF=0.107;AN=56;BaseQRankSum=7.037;DP=680;FS=13.543;HRun=0;HaplotypeScore=154.0980;InbreedingCoeff=-0.1152;MQ=76.57;MQ0=16;MQRankSum=-3.954;QD=1.23;ReadPosRankSum=-4.857;VQSLOD=-0.4218;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:99:0,105,2038	0/1:10,1:11:27.18:27,0,369	0/0:62,0:34:47.18:0,47,1550	0/0:78,1:42:66.29:0,66,1281	0/0:11,0:11:27.56:0,28,532	0/0:20,0:20:51.17:0,51,1002	0/0:31,0:31:75.20:0,75,1326	0/0:28,0:28:83.48:0,83,1549	0/0:25,3:28:48.45:0,48,1400	0/1:11,1:11:33.88:34,0,455	0/0:19,0:19:40.36:0,40,733	0/1:21,1:22:3.50:4,0,740	0/0:23,0:21:56.89:0,57,1058	0/0:18,3:18:11.99:0,12,553	0/0:40,1:41:63.96:0,64,1148	0/0:17,0:17:36.12:0,36,700	0/0:19,0:19:54.14:0,54,995	0/0:15,0:14:18.06:0,18,336	0/1:19,2:21:5.19:5,0,1026	0/0:13,3:16:11.10:0,11,566	0/0:17,0:16:38.94:0,39,556	0/0:21,3:23:50.95:0,51,905	0/1:8,0:8:13.44:13,0,113	0/0:22,1:23:45.15:0,45,896	0/0:12,0:12:9.55:0,10,545	0/1:16,7:23:99:150,0,847	0/0:32,0:31:19.46:0,19,893	0/0:6,0:6:9.03:0,9,183
chr10	92246971	.	C	CTCTCTCTCTCTCTTTCTTTT	8639.33	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=1.610;DP=723;FS=19.236;HRun=0;HaplotypeScore=327.7844;InbreedingCoeff=-0.3692;MQ=60.34;MQ0=21;MQRankSum=-4.741;QD=14.77;ReadPosRankSum=1.511;VQSLOD=1.5915;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:94.62:0,95,3697	1/1:13,0:13:21.64:428,22,0	0/1:58,0:19:13.23:13,0,395	0/0:85,0:41:26.16:0,26,723	0/0:11,0:11:5.87:0,6,145	1/1:23,0:23:63.14:1055,63,0	1/1:30,0:30:81.19:1761,81,0	0/1:37,0:36:99:569,0,155	0/1:29,0:28:99:147,0,247	0/1:15,0:14:99:235,0,191	0/1:14,0:14:9.34:38,0,9	0/1:24,0:24:99:206,0,231	0/1:23,0:21:66.53:71,0,67	0/1:24,0:21:74.13:74,0,192	0/1:43,0:42:45.54:568,0,46	1/1:4,10:18:1.74:284,2,0	0/1:24,0:23:99:499,0,153	0/1:19,0:18:23.85:557,0,24	0/1:29,0:29:99:450,0,346	1/1:14,0:14:17.96:176,18,0	0/1:18,0:17:31.33:31,0,88	0/1:23,0:22:36.31:36,0,176	0/1:11,0:11:99:152,0,206	0/1:21,0:21:93.74:94,0,94	1/1:8,0:8:11.37:99,11,0	0/1:25,0:23:99:591,0,125	0/1:32,0:31:55.61:355,0,56	1/1:10,0:10:3.01:150,3,0
chr10	92247420	.	TAC	T	115.91	PASS	AB=0.963;AC=12;AF=0.222;AN=54;BaseQRankSum=2.354;DP=551;FS=0.000;HRun=0;HaplotypeScore=145.4488;InbreedingCoeff=-0.1274;MQ=61.36;MQ0=8;MQRankSum=-0.790;QD=0.53;ReadPosRankSum=0.263;VQSLOD=2.4036;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:25.03:25,0,80	0/0:4,0:4:0.89:0,1,2	./.	0/0:27,0:19:2.90:0,3,16	0/1:22,0:22:24.10:24,0,83	0/1:17,1:18:17.83:18,0,155	0/0:27,0:27:17.63:0,18,206	1/1:22,0:21:2.12:20,2,0	0/1:15,0:15:33.55:53,0,34	0/1:31,1:32:29.28:29,0,156	0/0:14,0:14:10.11:0,10,110	0/0:21,0:21:19.28:0,19,188	0/1:14,0:14:12.68:13,0,85	0/0:17,0:16:7.70:0,8,111	0/0:15,0:15:0:0,0,0	0/1:20,1:20:23.73:24,0,208	0/0:10,0:14:3.47:0,3,26	0/1:16,1:17:9.62:10,0,265	0/0:8,0:8:6.02:0,6,87	0/0:16,0:16:1.32:0,1,7	0/1:22,0:22:8.88:9,0,126	0/0:26,1:27:3.78:0,4,78	0/0:19,0:19:7.85:0,8,141	0/0:26,0:25:12.02:0,12,149	0/0:35,0:35:5.34:0,5,106	0/0:18,0:18:18.29:0,18,115	0/0:13,0:13:17.83:0,18,251	0/1:5,1:6:3.58:27,0,4
chr10	92247461	.	A	ACACC	1975.59	PASS	AB=0.964;AC=20;AF=0.385;AN=52;BaseQRankSum=4.457;DP=579;FS=22.397;HRun=0;HaplotypeScore=223.8697;InbreedingCoeff=-0.6589;MQ=30.81;MQ0=18;MQRankSum=-2.098;QD=4.29;ReadPosRankSum=-0.167;VQSLOD=0.6102;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:26.63:0,27,462	0/1:2,2:4:58.44:127,0,58	./.	./.	0/1:20,0:20:64.14:64,0,210	0/1:21,0:20:37.80:38,0,369	0/1:23,0:23:85.38:85,0,381	0/1:26,1:24:86.91:87,0,505	0/1:18,0:18:99:149,0,191	0/1:49,0:46:94.46:94,0,1109	0/1:24,0:24:99:220,0,147	0/1:26,0:26:99:204,0,329	0/1:22,0:22:65.44:65,0,456	0/1:23,0:21:70.46:70,0,333	0/1:9,5:15:47.21:146,0,47	0/0:27,0:26:5.37:0,5,734	0/1:12,0:13:30.51:31,0,331	0/0:16,0:16:37.01:0,37,649	0/1:17,0:13:34.88:35,0,124	0/1:15,0:15:56.76:57,0,123	0/0:17,0:15:26.81:0,27,305	0/1:33,0:33:99:308,0,213	0/1:28,0:27:99:213,0,254	0/0:24,0:23:1.85:0,2,55	0/1:39,0:37:44.03:44,0,345	0/1:26,0:24:11.99:12,0,641	0/1:18,0:18:75.21:75,0,550	0/0:12,0:10:10.05:0,10,346
chr10	92267004	.	C	CA	58.18	PASS	AB=0.903;AC=10;AF=0.179;AN=56;BaseQRankSum=5.469;DP=532;FS=9.282;HRun=0;HaplotypeScore=136.1219;InbreedingCoeff=0.0559;MQ=46.06;MQ0=57;MQRankSum=-3.614;QD=0.41;ReadPosRankSum=1.925;VQSLOD=2.1607;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:9:9.05:0,9,74	1/1:10,1:8:8.68:38,9,0	0/1:22,0:8:31.82:35,0,32	0/1:16,1:4:20.41:32,0,20	0/0:24,7:28:19.51:0,20,160	0/0:12,0:10:10.10:0,10,80	0/0:20,0:17:19.53:0,20,196	0/0:23,0:21:34.41:0,34,393	0/0:15,0:12:14.59:0,15,109	0/0:45,1:38:47.66:0,48,757	0/1:10,4:12:0.43:1,0,0	0/0:19,0:13:13.56:0,14,117	0/0:8,0:8:8.93:0,9,81	0/0:24,1:18:26.15:0,26,214	0/0:17,0:12:5.89:0,6,39	0/0:12,2:8:16.05:0,16,121	0/1:11,0:9:7.25:7,0,128	0/0:8,0:6:8.46:0,8,141	0/1:22,0:15:4.48:4,0,203	0/0:16,3:19:20.90:0,21,143	0/0:31,0:29:22.74:0,23,224	0/0:27,4:26:16.49:0,16,98	0/0:16,2:16:5.60:0,6,94	0/0:18,0:15:15.94:0,16,147	0/1:19,1:17:12.31:12,0,133	0/0:23,1:20:25.13:0,25,471	0/1:11,3:12:23.60:24,0,168	0/1:7,3:10:38.73:39,0,130
chr10	92267051	.	GCA	G	2178.95	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.572;DP=759;FS=12.512;HRun=0;HaplotypeScore=241.6459;InbreedingCoeff=0.9823;MQ=49.51;MQ0=0;MQRankSum=-3.187;QD=28.67;ReadPosRankSum=-1.686;VQSLOD=2.7965;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:39.90:0,40,732	1/1:5,5:10:9.21:195,9,0	0/0:39,0:27:63.10:0,63,898	0/0:48,0:30:54.04:0,54,1055	0/0:33,0:33:36.88:0,37,734	0/0:16,0:16:42.14:0,42,729	0/0:31,0:30:75.26:0,75,1312	1/1:7,27:32:63.50:1070,63,0	0/0:18,0:17:27.40:0,27,471	0/0:39,0:39:49.37:0,49,1257	0/0:21,0:21:33.94:0,34,596	0/0:19,0:18:31.86:0,32,637	0/0:16,0:16:33.95:0,34,647	0/0:26,0:25:53.40:0,53,1034	1/1:2,11:13:32.59:414,33,0	0/0:16,0:15:42.14:0,42,733	1/1:3,16:19:50.67:656,51,0	0/0:18,0:17:26.87:0,27,764	0/0:21,0:20:48.14:0,48,803	0/0:24,0:24:41.01:0,41,675	0/0:73,0:72:99:0,166,2819	0/0:43,0:43:68.89:0,69,1121	0/0:30,0:30:38.51:0,39,690	0/0:41,0:41:93.32:0,93,1617	0/0:32,0:31:32.16:0,32,740	0/0:31,0:31:77.96:0,78,1224	0/0:18,0:18:44.85:0,45,837	0/0:11,0:11:22.10:0,22,334
chr10	92267058	.	CAT	C	875.43	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=13.062;DP=793;FS=27.042;HRun=0;HaplotypeScore=253.6234;InbreedingCoeff=0.6196;MQ=51.45;MQ0=2;MQRankSum=-6.278;QD=6.48;ReadPosRankSum=-1.775;VQSLOD=1.8303;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,1:21:34.09:0,34,855	1/1:9,0:10:25.45:138,25,0	0/0:41,0:30:53.31:0,53,977	0/0:50,0:37:28.14:0,28,1194	0/0:30,0:31:26.33:0,26,759	0/0:15,1:16:42.14:0,42,782	0/0:34,0:33:86.94:0,87,1511	1/1:34,0:32:34.34:401,34,0	0/0:16,0:16:39.39:0,39,587	0/1:42,0:40:29.94:30,0,1271	0/0:22,0:22:38.82:0,39,660	0/0:20,0:19:37.90:0,38,765	0/0:18,0:18:19.52:0,20,670	0/0:27,1:27:51.16:0,51,1152	0/1:16,0:16:11.76:176,0,12	0/0:17,0:15:42.14:0,42,794	1/1:22,0:22:20.10:282,20,0	0/0:19,0:17:26.77:0,27,839	0/0:22,1:22:56.61:0,57,858	0/0:26,0:26:35.22:0,35,754	0/0:78,0:77:99:0,177,3115	0/0:39,0:41:15:0,15,1152	0/0:29,1:30:6.37:0,6,728	0/0:45,0:44:99:0,99,1829	0/0:31,0:31:24.04:0,24,838	0/0:28,0:28:61.40:0,61,1308	0/0:18,0:18:27.01:0,27,900	0/1:11,0:11:3.12:3,0,324
chr10	92267111	.	ATAT	A	808.45	PASS	AB=0.851;AC=10;AF=0.179;AN=56;BaseQRankSum=10.597;DP=746;FS=52.628;HRun=0;HaplotypeScore=253.1466;InbreedingCoeff=-0.2185;MQ=49.80;MQ0=16;MQRankSum=-8.165;QD=3.64;ReadPosRankSum=2.714;VQSLOD=1.0294;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.14:0,90,2152	0/1:10,1:12:15.80:16,0,700	0/0:47,0:20:53.28:0,53,1125	0/0:46,0:21:13.22:0,13,1097	0/0:19,2:21:38.44:0,38,919	0/1:16,2:19:51.42:51,0,988	0/0:27,0:27:57.20:0,57,1391	0/0:37,0:36:99:0,102,2463	0/0:16,0:15:39.13:0,39,920	0/1:27,4:30:99:220,0,1445	0/0:15,4:18:22.58:0,23,501	0/0:11,1:12:30.08:0,30,701	0/1:14,0:15:24:24,0,631	0/0:24,0:23:26.83:0,27,1180	0/0:17,0:17:48.16:0,48,1179	0/0:19,0:18:45.15:0,45,942	0/0:28,0:26:70.27:0,70,1887	0/0:16,0:14:18.55:0,19,745	0/0:12,0:9:24.08:0,24,585	0/1:17,4:20:73.74:74,0,710	0/0:83,0:83:99:0,216,5129	0/1:20,6:26:99:102,0,964	0/1:9,6:15:26.55:27,0,440	0/0:52,0:51:96.83:0,97,2326	0/1:28,5:33:99:204,0,1419	0/1:39,1:39:91.49:91,0,2101	0/0:13,0:13:36.12:0,36,886	0/1:6,2:8:99:145,0,273
chr10	92267125	.	CCACACA	C	4081.43	PASS	AB=0.857;AC=25;AF=0.463;AN=54;BaseQRankSum=-0.892;DP=730;FS=13.374;HRun=0;HaplotypeScore=265.3507;InbreedingCoeff=0.5325;MQ=45.32;MQ0=33;MQRankSum=-5.111;QD=11.27;ReadPosRankSum=-0.700;VQSLOD=0.7579;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:69.23:0,69,1700	0/0:11,0:14:26.87:0,27,561	./.	0/0:40,0:12:12.04:0,12,231	0/0:11,0:17:9.35:0,9,170	1/1:13,0:19:20.84:264,21,0	1/1:20,0:22:3.31:15,3,0	0/0:39,0:33:3.32:0,3,274	0/0:13,0:16:21.04:0,21,257	0/1:27,1:30:62.63:285,0,63	1/1:11,3:14:4.75:118,5,0	1/1:12,2:13:15.03:228,15,0	1/1:7,9:16:8.90:187,9,0	1/1:12,6:18:21.16:482,21,0	0/0:10,0:15:33.11:0,33,846	1/1:3,0:15:23.99:305,24,0	0/0:18,0:31:66.09:0,66,1441	1/1:14,3:15:24.08:491,24,0	0/0:17,0:13:14.34:0,14,139	0/1:16,0:19:13.36:13,0,165	0/0:52,0:72:99:0,99,1360	0/1:17,6:24:22.81:209,0,23	0/1:13,0:13:10.41:56,0,10	1/1:40,10:53:41.86:782,42,0	1/1:23,9:33:26.78:576,27,0	0/1:26,2:36:71.86:72,0,720	0/0:9,0:15:23.29:0,23,327	0/0:5,0:9:7.74:0,8,81
chr10	92267805	.	AGC	A	602.05	PASS	AB=0.976;AC=14;AF=0.250;AN=56;BaseQRankSum=11.345;DP=917;FS=11.903;HRun=0;HaplotypeScore=227.1915;InbreedingCoeff=-0.3267;MQ=60.62;MQ0=23;MQRankSum=-7.333;QD=1.20;ReadPosRankSum=-3.658;VQSLOD=0.8038;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:94:0,94,2048	0/0:7,0:5:8.61:0,9,72	0/0:69,1:36:21.27:0,21,287	0/1:79,0:30:15.66:16,0,245	0/0:33,0:29:48.05:0,48,554	0/0:12,0:11:17.86:0,18,151	0/1:26,0:22:28.33:28,0,126	0/1:20,11:27:99:267,0,311	0/0:30,0:30:20.82:0,21,422	0/1:40,0:38:38.87:39,0,1175	0/0:29,0:28:27.34:0,27,847	0/1:50,0:49:19.61:20,0,874	0/1:41,0:39:29.16:29,0,906	0/1:47,0:45:23.78:24,0,909	0/0:35,0:33:25.51:0,26,368	0/1:35,3:38:99:142,0,145	0/1:15,0:13:7.38:7,0,89	0/0:20,0:20:53.87:0,54,853	0/1:12,0:10:1.01:1,0,178	0/0:17,0:16:33.02:0,33,430	0/0:37,0:36:60.11:0,60,806	0/0:28,0:26:4.44:0,4,471	0/0:24,1:25:17.84:0,18,593	0/1:42,0:42:44.30:44,0,648	0/0:21,0:19:29.98:0,30,456	0/1:45,0:44:82.05:82,0,875	0/1:25,0:24:31.54:32,0,430	0/1:9,0:8:21.51:22,0,183
chr10	92267807	.	C	CGA	758.75	PASS	AB=0.978;AC=14;AF=0.250;AN=56;BaseQRankSum=9.314;DP=904;FS=2.451;HRun=0;HaplotypeScore=231.7372;InbreedingCoeff=0.3441;MQ=58.87;MQ0=23;MQRankSum=-4.157;QD=2.56;ReadPosRankSum=-1.725;VQSLOD=2.6428;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,100,1407	1/1:3,3:5:2.96:19,3,0	0/0:60,0:29:1.14:0,1,211	0/1:72,0:28:2.38:2,0,165	0/0:32,0:29:36.03:0,36,464	1/1:13,0:12:3.39:26,3,0	0/1:26,0:22:8.78:22,0,9	0/1:32,0:28:88.72:199,0,89	0/0:29,0:29:8.68:0,9,298	0/0:41,0:39:20.85:0,21,941	0/0:29,0:28:41.42:0,41,530	0/0:49,0:48:37.90:0,38,566	0/0:41,0:39:49.40:0,49,709	0/0:45,0:43:45.23:0,45,592	1/1:20,13:31:29.50:392,29,0	1/1:39,0:40:10.68:136,11,0	0/1:13,2:13:12.40:44,0,12	0/0:20,0:20:45.09:0,45,573	0/0:12,0:10:20.83:0,21,177	0/0:19,0:18:25.81:0,26,290	0/0:39,0:37:34.78:0,35,660	0/0:29,0:27:26.62:0,27,321	0/0:25,0:25:33.98:0,34,427	0/0:40,0:40:34.28:0,34,487	0/0:21,0:19:24.01:0,24,306	0/1:43,0:42:44.30:44,0,708	0/0:26,0:25:30.94:0,31,433	0/1:11,0:9:34.83:35,0,100
chr10	92267811	.	AGC	A	1222.42	PASS	AB=0.996;AC=15;AF=0.268;AN=56;BaseQRankSum=6.210;DP=871;FS=9.467;HRun=0;HaplotypeScore=224.6830;InbreedingCoeff=0.5654;MQ=55.55;MQ0=20;MQRankSum=-2.992;QD=4.03;ReadPosRankSum=-1.637;VQSLOD=1.1354;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:93.12:0,93,1880	1/1:5,0:3:2.92:17,3,0	0/1:47,0:24:17.36:17,0,212	0/1:67,0:23:1.53:2,0,180	0/0:30,0:27:33.92:0,34,241	1/1:14,0:13:15.41:119,15,0	1/1:26,1:24:26.49:291,26,0	0/1:32,0:28:99:269,0,236	0/0:27,0:28:12.90:0,13,171	0/0:38,0:36:83.08:0,83,1435	0/0:30,0:29:46.57:0,47,728	0/0:47,0:46:31.85:0,32,806	0/0:41,0:39:69.92:0,70,973	0/0:45,0:43:52.29:0,52,955	1/1:28,2:29:26.99:206,27,0	1/1:36,2:38:41.73:400,42,0	0/1:14,0:12:3.35:46,0,3	0/0:19,0:19:50.90:0,51,713	0/0:11,0:9:23.76:0,24,179	0/0:20,0:19:28.85:0,29,268	0/0:42,0:40:64.27:0,64,536	0/0:29,0:27:29.23:0,29,438	0/0:26,0:26:35.98:0,36,546	0/0:41,0:41:50.65:0,51,759	0/0:19,0:17:23.51:0,24,356	0/0:42,0:41:52.96:0,53,668	0/1:26,0:25:34.49:34,0,212	0/0:12,0:10:24.85:0,25,155
chr10	92267817	.	AGC	A	2732.80	PASS	AB=0.993;AC=27;AF=0.482;AN=56;BaseQRankSum=1.601;DP=844;FS=22.355;HRun=0;HaplotypeScore=221.3269;InbreedingCoeff=0.3407;MQ=53.65;MQ0=19;MQRankSum=-2.510;QD=5.49;ReadPosRankSum=0.196;VQSLOD=1.6409;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:3.05:0,3,1045	0/1:6,0:4:11.97:12,0,31	0/1:35,0:14:38.29:38,0,41	0/0:50,1:20:14.87:0,15,65	1/1:27,0:24:32.77:269,33,0	1/1:16,0:15:21.38:165,21,0	1/1:26,0:23:19.80:238,20,0	1/1:34,0:30:17.68:250,18,0	1/1:26,2:28:27.10:217,27,0	0/0:39,0:36:14.22:0,14,440	0/0:27,1:27:38.81:0,39,273	0/1:44,1:44:2.21:2,0,271	0/0:42,0:40:12.24:0,12,254	0/1:45,0:43:28.66:29,0,250	0/1:30,0:29:55.87:118,0,56	1/1:39,0:39:38.65:381,39,0	0/1:12,0:10:5.15:5,0,34	0/0:17,0:17:10.16:0,10,215	1/1:11,3:11:7.05:99,7,0	1/1:19,0:18:12.45:125,12,0	1/1:40,1:39:16.73:281,17,0	0/0:28,0:26:13.73:0,14,110	0/0:27,0:27:21.85:0,22,176	0/0:43,0:43:15.94:0,16,236	0/0:19,0:17:14.16:0,14,126	0/1:40,2:41:50.74:423,0,51	0/1:27,0:26:14.52:247,0,15	0/1:12,0:10:20.11:28,0,20
chr10	92267841	.	AGAGAGAGAGT	A	4191.60	PASS	AB=0.995;AC=24;AF=0.429;AN=56;BaseQRankSum=0.740;DP=828;FS=4.303;HRun=0;HaplotypeScore=327.9368;InbreedingCoeff=-0.6217;MQ=55.03;MQ0=13;MQRankSum=3.336;QD=6.17;ReadPosRankSum=0.277;VQSLOD=1.4705;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,124,3632	0/0:4,0:3:2.98:0,3,21	0/0:25,0:11:25.69:0,26,301	0/0:32,0:17:24.42:0,24,451	0/1:26,0:25:56.59:57,0,84	0/1:25,0:24:99:138,0,134	0/1:29,0:27:22.82:23,0,167	0/0:39,0:36:77.40:0,77,622	0/1:34,0:34:99:269,0,119	0/1:31,0:29:99:287,0,238	0/1:23,0:22:99:164,0,114	0/1:39,0:39:99:208,0,246	0/1:43,2:43:51.44:502,0,51	0/1:42,0:40:99:410,0,129	0/1:31,0:30:28.62:29,0,280	0/1:40,0:40:99:173,0,221	0/1:13,0:11:17.88:51,0,18	0/1:18,0:18:99:158,0,115	0/1:18,0:16:98.38:98,0,162	0/1:23,0:22:27.18:136,0,27	0/1:50,0:47:99:422,0,150	1/1:26,1:26:24.03:260,24,0	0/1:19,1:20:48.04:48,0,58	0/1:35,1:36:99:206,0,144	0/1:18,0:15:64.78:65,0,74	0/1:47,0:46:99:213,0,846	0/1:23,0:22:99:102,0,204	0/1:21,0:20:99:174,0,207
chr10	92267843	.	AGAGAGAGT	A	6668.66	PASS	AB=0.965;AC=27;AF=0.482;AN=56;BaseQRankSum=-0.763;DP=798;FS=3.192;HRun=0;HaplotypeScore=290.7135;InbreedingCoeff=-0.4156;MQ=55.94;MQ0=12;MQRankSum=3.272;QD=10.17;ReadPosRankSum=2.317;VQSLOD=2.8655;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,126,3024	0/0:4,0:3:3.01:0,3,37	0/0:24,0:11:25.96:0,26,334	0/0:32,0:17:25.51:0,26,420	0/1:22,0:22:28.87:93,0,29	0/1:25,0:24:85.73:140,0,86	0/1:32,0:31:38.40:59,0,38	0/0:33,0:32:60.23:0,60,420	0/1:34,0:34:67.50:186,0,67	0/1:26,2:27:99:712,0,104	0/1:19,0:19:50.01:429,0,50	0/1:31,5:36:17.58:507,0,18	1/1:39,4:42:40.35:1076,40,0	1/1:36,3:37:3.93:643,4,0	0/1:30,0:29:95.80:96,0,180	0/1:40,0:40:99:208,0,117	0/1:14,0:12:48:72,0,48	0/1:18,0:18:40.06:379,0,40	0/1:18,0:16:99:117,0,128	1/1:23,0:22:6.37:144,6,0	0/1:50,0:47:99:312,0,100	1/1:23,1:24:29.81:340,30,0	0/1:8,12:20:20.71:94,0,21	0/1:36,1:37:34.58:508,0,35	0/1:15,1:14:36.18:109,0,36	0/1:43,1:43:99:206,0,578	0/1:23,0:22:99:104,0,178	0/1:21,0:20:99:136,0,137
chr10	92267847	.	AGAGT	A	7304.50	PASS	AB=0.984;AC=44;AF=0.786;AN=56;BaseQRankSum=-0.291;DP=745;FS=7.448;HRun=0;HaplotypeScore=242.9878;InbreedingCoeff=0.3916;MQ=58.47;MQ0=11;MQRankSum=-0.720;QD=11.36;ReadPosRankSum=2.250;VQSLOD=3.1187;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:80.79:0,81,1498	1/1:4,0:3:1.82:5,2,0	0/0:26,0:12:22.10:0,22,258	0/0:32,0:17:25.09:0,25,337	1/1:16,1:17:26.78:208,27,0	0/1:24,0:23:4.38:207,0,4	1/1:31,0:30:10.30:126,10,0	0/1:27,0:26:8.40:8,0,81	1/1:27,5:32:44.66:507,45,0	1/1:23,0:22:3.75:261,4,0	1/1:19,0:19:16.69:264,17,0	1/1:29,1:30:6.31:275,6,0	1/1:38,1:38:78.74:707,79,0	1/1:37,1:36:52.79:539,53,0	0/1:31,0:30:3.83:207,0,4	1/1:39,0:39:35.11:284,35,0	1/1:15,0:13:18.03:132,18,0	0/1:17,0:17:5.93:187,0,6	1/1:17,0:16:15.33:237,15,0	1/1:19,2:20:24.41:257,24,0	1/1:45,6:50:57.58:948,58,0	1/1:19,3:22:25.18:226,25,0	1/1:18,0:19:5.75:55,6,0	1/1:37,0:37:14.41:298,14,0	0/1:14,0:12:9.75:75,0,10	1/1:36,2:37:26.82:703,27,0	0/1:17,2:18:2.62:221,0,3	1/1:16,3:18:20.90:368,21,0
chr10	92267849	.	AGT	A	8314.94	PASS	AB=0.956;AC=45;AF=0.804;AN=56;BaseQRankSum=-1.375;DP=687;FS=18.276;HRun=0;HaplotypeScore=209.3385;InbreedingCoeff=0.5835;MQ=61.93;MQ0=11;MQRankSum=-2.992;QD=14.34;ReadPosRankSum=-1.814;VQSLOD=2.8534;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:90.98:0,91,1074	0/0:4,0:3:2.74:0,3,12	0/0:26,0:12:22.10:0,22,275	0/0:33,1:19:27.84:0,28,338	1/1:14,0:14:26.61:208,27,0	1/1:23,0:22:32.91:264,33,0	1/1:26,0:27:21.97:261,22,0	0/1:24,0:23:17.78:18,0,22	1/1:22,1:23:47.22:368,47,0	1/1:18,5:22:37.67:545,38,0	1/1:15,4:19:41.75:397,42,0	1/1:24,4:28:47.95:464,48,0	1/1:33,7:39:85.23:833,85,0	1/1:25,12:36:62.06:627,62,0	1/1:29,1:29:2.55:185,3,0	1/1:37,0:37:34.90:359,35,0	0/1:14,0:12:6.44:109,0,6	1/1:15,3:18:41.93:376,42,0	1/1:12,0:12:29.96:258,30,0	1/1:16,1:16:33.45:296,33,0	1/1:45,0:44:93.49:757,93,0	1/1:20,2:22:29.77:269,30,0	1/1:17,1:18:5.85:67,6,0	1/1:26,11:37:46.81:497,47,0	1/1:13,2:13:17.74:140,18,0	1/1:27,0:26:65.65:582,66,0	0/1:11,2:13:11.87:152,0,12	1/1:17,0:16:35.86:284,36,0
chr10	92267895	.	GCA	G	7222.92	PASS	AB=0.873;AC=34;AF=0.607;AN=56;BaseQRankSum=-2.798;DP=774;FS=10.418;HRun=0;HaplotypeScore=199.8109;InbreedingCoeff=0.5268;MQ=60.10;MQ0=8;MQRankSum=-0.407;QD=13.55;ReadPosRankSum=0.638;VQSLOD=3.9713;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:50:92.99:0,93,853	1/1:1,1:4:8.69:63,9,0	0/0:28,0:6:11.78:0,12,153	0/0:35,0:14:17.95:0,18,228	1/1:4,16:20:42.11:495,42,0	1/1:1,0:12:25.57:126,26,0	1/1:9,0:37:42.61:210,43,0	0/1:10,0:16:2.23:53,0,2	1/1:8,19:28:47.97:544,48,0	0/0:24,0:24:26.81:0,27,424	0/0:20,1:21:7.96:0,8,344	0/1:27,5:32:65.24:65,0,419	0/1:40,6:46:33.67:34,0,710	0/0:29,2:32:9.16:0,9,545	1/1:5,27:33:81.07:933,81,0	1/1:5,0:29:53.97:266,54,0	1/1:3,13:18:32.76:346,33,0	0/1:25,1:26:3.13:3,0,425	1/1:7,7:13:18.01:184,18,0	1/1:3,15:18:36.11:424,36,0	1/1:24,54:85:99:1901,170,0	0/1:17,3:20:85.75:86,0,271	0/1:24,2:26:22.98:23,0,359	0/0:36,2:38:15.65:0,16,447	0/0:12,1:13:0.72:0,1,277	1/1:9,17:27:53.97:601,54,0	1/1:6,12:20:32.76:346,33,0	1/1:3,17:22:47.80:523,48,0
chr10	92271089	.	A	AACAC	3789.05	PASS	AB=0.862;AC=30;AF=0.577;AN=52;BaseQRankSum=-2.902;DP=511;FS=5.163;HRun=0;HaplotypeScore=95.8241;InbreedingCoeff=0.6849;MQ=61.86;MQ0=19;MQRankSum=-1.368;QD=11.69;ReadPosRankSum=-0.170;VQSLOD=2.3412;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,6:28:14.73:243,15,0	./.	0/1:49,0:24:0:0,0,0	./.	1/1:9,7:18:17.89:349,18,0	1/1:9,6:16:7.26:106,7,0	1/1:10,14:29:38.78:802,39,0	1/1:16,0:16:9.03:111,9,0	1/1:13,4:20:8.32:155,8,0	0/0:26,0:26:32.08:0,32,382	0/0:10,0:10:9.03:0,9,140	0/0:17,0:17:21.07:0,21,314	0/0:14,0:16:14.64:0,15,361	0/0:11,0:11:21.07:0,21,328	1/1:10,9:20:18.06:425,18,0	1/1:6,5:11:14.79:295,15,0	0/1:13,7:24:2.94:318,0,3	0/0:17,0:17:14.44:0,14,276	1/1:8,5:13:15.91:232,16,0	0/1:11,5:15:8.97:65,0,9	1/1:9,12:27:12.04:280,12,0	0/0:21,0:20:19.78:0,20,518	0/0:12,0:11:8.96:0,9,138	0/0:18,0:16:24.08:0,24,361	0/1:10,0:10:12.89:13,0,107	1/1:12,1:13:14.71:113,15,0	1/1:4,3:8:14.52:237,15,0	1/1:2,0:2:5.97:44,6,0
chr10	92271428	.	CGGGA	C	2889.90	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.665;DP=705;FS=2.463;HRun=0;HaplotypeScore=116.5824;InbreedingCoeff=0.9828;MQ=80.17;MQ0=0;MQRankSum=-1.130;QD=35.24;ReadPosRankSum=4.836;VQSLOD=3.6036;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,153,3585	1/1:3,9:12:18.06:330,18,0	0/0:20,0:19:50.76:0,51,1090	0/0:19,0:18:13.32:0,13,1220	0/0:16,0:16:42.14:0,42,1063	0/0:22,0:22:60.19:0,60,1493	0/0:27,0:27:81.27:0,81,2035	0/0:24,0:24:63.22:0,63,1578	0/0:32,0:32:93.29:0,93,2346	0/0:24,0:24:63.21:0,63,1584	0/0:12,0:12:30.10:0,30,792	0/0:37,0:38:99:0,99,2527	0/0:30,0:30:84.26:0,84,2056	0/0:28,0:28:81.27:0,81,2020	1/1:5,38:43:96.33:1764,96,0	0/0:34,0:34:93.31:0,93,2401	1/1:2,25:27:51.17:937,51,0	0/0:33,0:33:96.28:0,96,2420	0/0:10,0:10:30.09:0,30,739	0/0:14,0:14:42.14:0,42,1065	0/0:53,0:53:99:0,135,3416	0/0:27,0:27:75.24:0,75,1850	0/0:12,0:12:33.07:0,33,805	0/0:33,0:33:99:0,99,2497	0/0:16,0:16:48.14:0,48,1158	0/0:22,0:22:66.22:0,66,1586	0/0:19,0:19:51.15:0,51,1234	0/0:5,0:5:15.05:0,15,277
chr10	92273833	.	TCC	T	3097.97	PASS	AB=0.706;AC=23;AF=0.411;AN=56;BaseQRankSum=6.791;DP=451;FS=25.162;HRun=12;HaplotypeScore=62.3708;InbreedingCoeff=0.6819;MQ=67.62;MQ0=1;MQRankSum=2.388;QD=12.29;ReadPosRankSum=8.250;VQSLOD=-0.2769;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:16:21:0,21,220	0/1:3,0:5:6.22:6,0,11	0/0:6,0:7:8.95:0,9,91	0/0:12,0:8:2.60:0,3,66	1/1:5,8:18:29.50:263,29,0	0/1:10,1:16:34.98:35,0,136	0/1:11,6:21:33.91:123,0,34	0/0:16,0:16:5.98:0,6,63	1/1:5,8:14:20.76:193,21,0	0/0:10,0:10:14.97:0,15,140	0/0:10,0:10:12.02:0,12,141	0/0:21,0:22:40.97:0,41,363	0/0:17,0:18:25.99:0,26,248	0/0:9,0:9:21.02:0,21,245	1/1:2,0:31:79.58:344,80,0	0/0:6,0:15:18.54:0,19,65	1/1:7,0:25:41.13:178,41,0	0/0:12,0:12:21.02:0,21,234	1/1:8,5:14:3.42:142,3,0	1/1:2,4:6:8.97:83,9,0	1/1:21,38:62:99:1102,113,0	0/0:10,0:10:14.51:0,15,146	0/0:10,0:10:12:0,12,120	0/0:18,0:20:35.49:0,35,358	0/0:7,0:11:7.99:0,8,43	1/1:1,12:14:35.79:347,36,0	1/1:6,14:20:39.05:395,39,0	1/1:3,3:6:8.99:91,9,0
chr10	92274658	.	GAT	G	107.64	PASS	AB=1.000;AC=8;AF=0.154;AN=52;BaseQRankSum=2.049;DP=228;FS=0.000;HRun=0;HaplotypeScore=44.9477;InbreedingCoeff=0.2976;MQ=83.95;MQ0=6;MQRankSum=-1.093;QD=1.92;ReadPosRankSum=-0.837;VQSLOD=0.7205;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,7:12:12.04:150,12,0	1/1:4,0:4:8.39:39,8,0	0/0:16,0:7:0.46:0,0,1	0/0:32,0:17:11.20:0,11,86	0/0:8,0:8:0.47:0,0,1	0/0:4,0:4:0:0,0,0	0/0:4,0:4:0.47:0,0,1	0/0:8,0:8:4.32:0,4,12	0/0:3,0:3:5.38:0,5,46	0/0:3,0:3:3.01:0,3,46	0/0:4,0:4:6.01:0,6,74	0/0:7,0:7:6.02:0,6,85	0/0:7,0:7:3.01:0,3,37	0/0:4,0:4:6.02:0,6,85	1/1:8,0:8:5.60:26,6,0	0/0:5,0:5:2.99:0,3,24	0/1:23,0:22:4.54:5,0,46	0/0:21,0:21:12.03:0,12,484	./.	0/0:10,0:10:3.01:0,3,37	0/0:4,0:4:3.01:0,3,37	0/0:7,0:7:6.02:0,6,96	0/0:1,0:1:3.01:0,3,47	0/0:2,0:2:3.01:0,3,47	0/0:5,0:5:1.57:0,2,34	0/0:4,0:4:3.01:0,3,38	./.	0/1:9,0:9:3.44:3,0,20
chr10	92274662	.	TATATATATATA	T	1114.92	PASS	AB=0.929;AC=20;AF=0.435;AN=46;BaseQRankSum=0.966;DP=205;FS=2.257;HRun=0;HaplotypeScore=62.1860;InbreedingCoeff=0.2161;MQ=79.55;MQ0=7;MQRankSum=-2.593;QD=8.20;ReadPosRankSum=-0.140;VQSLOD=1.3636;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:12.04:0,12,390	1/1:0,4:4:9.03:303,9,0	0/0:17,0:5:4.25:0,4,36	0/1:38,0:17:0.40:0,0,92	1/1:6,0:6:2.84:21,3,0	./.	1/1:4,0:4:3.01:37,3,0	0/1:9,0:9:65.68:66,0,90	1/1:3,0:3:3.01:31,3,0	0/0:3,0:3:3:0,3,27	0/0:3,0:3:2.99:0,3,24	0/0:5,0:5:6.02:0,6,96	0/0:3,0:3:3.01:0,3,110	0/0:3,0:3:6.02:0,6,180	1/1:0,7:7:6.02:202,6,0	0/1:2,0:2:0:0,0,0	0/1:5,15:19:24.63:233,0,25	0/1:22,0:22:3.45:3,0,1044	./.	1/1:10,0:10:0.94:1,1,0	./.	0/0:6,0:6:6.02:0,6,72	0/0:1,0:1:3.01:0,3,36	0/0:1,0:1:3.01:0,3,37	0/1:5,0:5:67.18:67,0,88	./.	./.	1/1:6,0:6:14.86:283,15,0
chr10	92274672	.	TA	T	749.60	PASS	AB=0.849;AC=26;AF=0.500;AN=52;BaseQRankSum=0.451;DP=178;FS=0.872;HRun=2;HaplotypeScore=35.5119;InbreedingCoeff=0.4037;MQ=66.03;MQ0=12;MQRankSum=-2.343;QD=12.29;ReadPosRankSum=-1.174;VQSLOD=1.6651;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:6.22:0,6,18	1/1:4,1:4:7.49:26,7,0	0/0:22,0:4:6.81:0,7,52	0/0:53,0:16:20.50:0,20,188	1/1:0,2:2:2.88:38,3,0	1/1:0,1:1:3.01:38,3,0	1/1:1,0:1:3.01:37,3,0	1/1:0,8:8:24.06:291,24,0	1/1:1,2:3:2.98:21,3,0	0/0:1,0:1:3.01:0,3,30	0/0:1,0:1:3.01:0,3,40	0/0:2,0:2:5.93:0,6,57	0/0:1,0:1:2.92:0,3,17	0/0:3,0:3:5.95:0,6,59	1/1:7,0:7:5.44:27,5,0	1/1:1,1:2:5.81:51,6,0	0/0:18,1:17:0.91:0,1,46	0/1:17,1:18:25.80:26,0,245	1/1:1,0:1:2.60:10,3,0	1/1:1,2:3:6.02:76,6,0	./.	0/0:2,0:2:6.02:0,6,79	0/0:1,0:1:3.01:0,3,40	0/0:1,0:1:3.01:0,3,40	0/1:2,1:3:7.68:67,0,8	./.	1/1:0,1:1:3.01:38,3,0	1/1:0,6:6:17.70:163,18,0
chr10	92274673	.	A	AATAT	1360.76	PASS	AB=1.000;AC=29;AF=0.725;AN=40;BaseQRankSum=-2.762;DP=176;FS=6.842;HRun=0;HaplotypeScore=38.0393;InbreedingCoeff=0.2804;MQ=65.80;MQ0=12;MQRankSum=-0.138;QD=17.67;ReadPosRankSum=0.211;VQSLOD=2.0177;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:12.04:0,12,155	0/0:5,0:4:8.37:0,8,61	0/0:24,0:4:1.61:0,2,53	0/0:54,0:16:8.52:0,9,76	1/1:2,0:2:2.60:10,3,0	./.	./.	1/1:8,0:8:3.47:26,3,0	1/1:2,0:2:2.81:35,3,0	1/1:1,0:1:3.01:38,3,0	1/1:1,0:1:3.01:38,3,0	1/1:2,0:2:3.01:75,3,0	1/1:0,1:1:3.01:74,3,0	1/1:1,0:3:2.80:13,3,0	0/1:7,0:7:2.99:13,0,3	1/1:1,0:2:2.60:10,3,0	0/1:19,0:17:0.99:1,0,27	1/1:8,9:18:45.13:926,45,0	1/1:1,0:1:2.60:10,3,0	./.	./.	./.	./.	./.	1/1:1,1:3:9.03:151,9,0	./.	1/1:1,0:1:3:28,3,0	0/1:6,0:6:31.42:38,0,31
chr10	92274698	.	CAT	C	395.58	PASS	AC=14;AF=0.368;AN=38;BaseQRankSum=2.931;DP=171;FS=4.340;HRun=0;HaplotypeScore=45.7526;InbreedingCoeff=0.5340;MQ=62.96;MQ0=9;MQRankSum=-0.672;QD=12.76;ReadPosRankSum=0.938;VQSLOD=2.9702;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:6.02:0,6,99	0/0:5,0:4:9:0,9,116	0/0:27,0:6:3.01:0,3,32	0/0:48,2:13:3.59:0,4,100	1/1:2,0:2:0.47:1,0,0	0/0:2,0:2:6.01:0,6,73	0/0:1,0:1:3.01:0,3,47	0/0:17,0:17:51.17:0,51,881	./.	./.	./.	1/1:2,0:2:2.99:24,3,0	1/1:0,1:1:3.01:39,3,0	1/1:2,0:2:4.56:43,5,0	0/0:5,0:5:9.01:0,9,100	./.	0/0:19,0:18:21.07:0,21,353	1/1:5,12:17:27.05:319,27,0	0/0:4,0:4:6:0,6,72	./.	./.	./.	./.	./.	1/1:2,2:4:6.91:83,7,0	0/0:1,0:1:0.47:0,0,1	0/0:2,0:2:2.99:0,3,24	1/1:3,0:3:3.54:12,4,0
chr10	92277116	.	CTGGGGACGTT	C	16747.21	PASS	AB=0.519;AC=27;AF=0.482;AN=56;BaseQRankSum=16.687;DP=616;FS=1.491;HRun=0;HaplotypeScore=192.3375;InbreedingCoeff=0.9106;MQ=72.83;MQ0=0;MQRankSum=-17.312;QD=60.68;ReadPosRankSum=5.540;VQSLOD=4.7501;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,5284	1/1:2,8:10:27.09:797,27,0	0/0:16,0:16:45.15:0,45,1768	0/0:21,0:21:50.35:0,50,2092	1/1:2,12:14:21.07:697,21,0	1/1:0,10:11:27.09:855,27,0	1/1:2,28:30:54.19:1755,54,0	0/0:22,0:22:63.22:0,63,2936	1/1:0,28:28:51.18:1670,51,0	0/0:17,0:17:48.16:0,48,2363	0/0:9,0:9:27.08:0,27,1212	0/0:40,0:40:99:0,120,6084	0/0:31,0:31:90.30:0,90,4309	0/0:43,0:43:99:0,129,6239	1/1:0,24:24:51.18:1654,51,0	1/1:1,23:24:57.20:1899,57,0	1/1:0,22:22:45.15:1345,45,0	0/0:28,0:28:81.26:0,81,4031	1/1:0,16:16:48.07:1316,48,0	1/1:0,10:10:15.05:456,15,0	1/1:2,33:35:23.61:674,24,0	0/0:12,0:12:36.11:0,36,1699	0/0:13,0:13:36.11:0,36,1528	0/0:33,0:33:96.30:0,96,4659	0/0:16,0:16:45.15:0,45,2198	0/1:2,26:28:99:1890,0,209	1/1:0,20:20:48.16:1537,48,0	1/1:0,4:4:6.02:200,6,0
chr10	92281454	.	TGAAAAGA	T	16222.19	PASS	AB=0.867;AC=51;AF=0.944;AN=54;BaseQRankSum=-1.342;DP=462;FS=1.266;HRun=0;HaplotypeScore=194.9466;InbreedingCoeff=0.4517;MQ=50.65;MQ0=0;MQRankSum=-2.543;QD=36.29;ReadPosRankSum=1.454;VQSLOD=4.3403;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,1:19:32.79:507,33,0	1/1:2,0:2:3.01:35,3,0	0/1:11,2:6:57.94:138,0,58	0/0:10,0:5:12.01:0,12,242	1/1:12,1:13:8.65:154,9,0	1/1:20,3:23:66.19:1203,66,0	1/1:11,6:17:44.88:872,45,0	1/1:14,6:20:39.10:737,39,0	1/1:17,1:18:39.44:701,39,0	1/1:11,4:15:29.67:492,30,0	./.	1/1:32,2:34:93.55:1530,94,0	1/1:18,2:20:54.55:724,55,0	1/1:22,5:27:36.20:1117,36,0	1/1:11,1:12:33.04:629,33,0	1/1:31,1:31:80.69:1462,81,0	1/1:17,2:17:35.27:543,35,0	1/1:10,1:10:27:396,27,0	1/1:11,2:13:34.02:522,34,0	1/1:5,1:6:8.77:151,9,0	1/1:30,3:32:27.03:411,27,0	1/1:8,2:10:27.09:574,27,0	1/1:3,5:8:6.02:146,6,0	1/1:24,2:24:54.27:881,54,0	1/1:9,2:11:27.09:572,27,0	1/1:21,5:25:58.21:995,58,0	1/1:13,2:15:35.54:598,36,0	1/1:3,0:3:8.99:132,9,0
chr10	92281455	.	GA	G	6005.86	PASS	AB=1.000;AC=51;AF=0.944;AN=54;BaseQRankSum=-0.500;DP=424;FS=0.000;HRun=4;HaplotypeScore=191.8886;InbreedingCoeff=0.5021;MQ=51.88;MQ0=0;MQRankSum=-2.940;QD=14.61;ReadPosRankSum=3.442;VQSLOD=3.4239;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,7:16:21.56:128,22,0	1/1:0,0:1:3.01:36,3,0	0/1:14,0:6:4.78:5,0,14	0/0:11,1:5:8.96:0,9,91	1/1:4,6:13:8.27:62,8,0	1/1:7,10:22:46.91:222,47,0	1/1:6,4:17:37.41:241,37,0	1/1:6,0:15:33.41:313,33,0	1/1:1,14:17:46.01:378,46,0	1/1:6,3:11:24.63:203,25,0	./.	1/1:3,22:33:79.62:586,80,0	1/1:3,11:19:50.21:409,50,0	1/1:5,15:26:62.69:487,63,0	1/1:1,8:12:29.24:174,29,0	1/1:4,17:28:67.12:477,67,0	1/1:3,11:15:33.64:292,34,0	1/1:1,6:9:24.29:186,24,0	1/1:3,5:13:30:234,30,0	1/1:2,2:5:8.10:55,8,0	1/1:10,6:23:17.65:146,18,0	1/1:3,3:10:21.41:135,21,0	1/1:5,2:8:5.44:27,5,0	1/1:5,17:24:45.85:376,46,0	1/1:3,4:10:9.91:80,10,0	1/1:9,6:23:46.39:389,46,0	1/1:3,6:15:30.60:284,31,0	1/1:0,2:3:8.39:80,8,0
chr10	92281477	.	G	GT	544.77	PASS	AB=0.914;AC=5;AF=0.089;AN=56;BaseQRankSum=1.104;DP=568;FS=0.753;HRun=1;HaplotypeScore=241.4348;InbreedingCoeff=-0.0564;MQ=50.61;MQ0=8;MQRankSum=-2.913;QD=5.45;ReadPosRankSum=5.336;VQSLOD=0.4650;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:35.40:0,35,334	0/1:1,2:3:19.89:86,0,20	0/0:37,0:8:18:0,18,191	0/0:26,0:8:8.94:0,9,88	0/0:11,0:11:9:0,9,103	0/0:20,0:20:30:0,30,263	0/1:18,0:18:51.80:78,0,52	0/0:20,0:20:46.59:0,47,480	0/0:18,1:19:1.64:0,2,486	0/0:9,0:9:23.44:0,23,290	0/0:4,0:4:9.03:0,9,124	0/0:51,0:51:99:0,125,1342	0/0:25,0:25:72.18:0,72,866	0/0:29,0:29:41.61:0,42,563	0/1:22,0:22:50.67:51,0,128	0/1:33,1:34:99:324,0,222	0/1:23,0:21:99:121,0,112	0/0:12,0:11:12.82:0,13,295	0/0:22,0:21:51.29:0,51,583	0/0:8,0:8:18:0,18,224	0/0:44,0:43:58.60:0,59,733	0/0:12,0:12:20.29:0,20,182	0/0:5,0:5:1.25:0,1,3	0/0:28,0:26:51.65:0,52,497	0/0:10,0:10:20.78:0,21,162	0/0:29,0:28:73.64:0,74,857	0/0:16,0:16:37.28:0,37,439	0/0:5,0:5:13.55:0,14,138
chr10	92281489	.	T	TGTGC	1811.24	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=-0.071;DP=574;FS=2.348;HRun=0;HaplotypeScore=227.1257;InbreedingCoeff=0.6524;MQ=55.42;MQ0=9;MQRankSum=-3.869;QD=13.03;ReadPosRankSum=3.923;VQSLOD=2.9406;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:25.40:0,25,315	1/1:5,0:5:11.78:173,12,0	0/0:41,0:10:16.86:0,17,218	0/0:34,0:11:11.13:0,11,102	0/0:9,0:9:8.84:0,9,100	0/0:7,14:22:2.29:0,2,6	1/1:3,14:17:11.89:255,12,0	0/0:22,0:22:48.96:0,49,577	0/1:23,0:23:16.84:17,0,428	0/0:12,0:12:33.02:0,33,390	0/0:4,0:4:9.03:0,9,169	0/0:47,0:47:86.57:0,87,1142	0/0:28,0:28:60.68:0,61,786	0/0:27,0:27:54.91:0,55,646	1/1:5,19:27:6.02:138,6,0	1/1:8,25:36:33.10:834,33,0	1/1:5,13:19:26.87:548,27,0	0/1:10,0:9:14.90:15,0,183	0/0:19,0:18:46.64:0,47,633	0/0:8,0:8:17.88:0,18,281	0/0:42,0:41:62.36:0,62,932	0/0:9,0:9:14.92:0,15,179	0/0:2,0:2:2.99:0,3,24	0/0:26,0:24:29.82:0,30,327	0/0:10,0:10:7.83:0,8,87	0/0:26,0:26:74.70:0,75,968	0/0:17,0:17:32.98:0,33,415	0/0:4,0:4:11.98:0,12,144
chr10	92281907	.	T	TAA	4358.17	PASS	AB=0.857;AC=13;AF=0.232;AN=56;BaseQRankSum=-6.128;DP=516;FS=26.539;HRun=8;HaplotypeScore=78.6260;InbreedingCoeff=0.8831;MQ=67.72;MQ0=0;MQRankSum=-0.424;QD=34.59;ReadPosRankSum=1.744;VQSLOD=3.4692;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:66.16:0,66,734	1/1:3,6:9:18.06:275,18,0	0/0:9,0:9:15.63:0,16,130	0/1:5,0:5:2.32:2,0,46	0/0:18,0:18:48.09:0,48,514	1/1:6,14:20:46.78:683,47,0	1/1:2,8:10:27.05:401,27,0	0/0:38,0:38:99:0,99,1066	0/0:11,0:11:27.07:0,27,301	0/0:18,0:18:51.12:0,51,558	0/0:11,0:11:33.09:0,33,366	0/0:22,0:22:60.12:0,60,650	0/0:13,0:13:33.05:0,33,355	0/0:25,0:25:69.04:0,69,720	1/1:5,24:30:74.40:1041,74,0	1/1:3,25:29:58.78:1182,59,0	1/1:2,19:22:53.63:774,54,0	0/0:26,0:26:55.70:0,56,605	0/0:18,0:18:48.13:0,48,532	0/0:24,0:24:63.08:0,63,655	0/0:21,0:21:45.08:0,45,490	0/0:12,0:12:30.07:0,30,327	0/0:14,0:14:42.08:0,42,450	0/0:17,0:17:45.07:0,45,479	0/0:17,0:17:45.58:0,46,494	0/0:19,0:19:48.11:0,48,533	0/0:23,0:23:48.11:0,48,533	0/0:7,0:7:0.06:0,0,119
chr10	92281957	.	TTTTTGGGGTTC	T	2827.48	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=1.538;DP=504;FS=7.672;HRun=0;HaplotypeScore=156.3131;InbreedingCoeff=0.8023;MQ=55.96;MQ0=27;MQRankSum=-7.418;QD=26.93;ReadPosRankSum=-4.772;VQSLOD=0.9486;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:43.49:0,43,2826	1/1:6,1:7:11.25:226,11,0	0/0:22,0:10:14.61:0,15,265	0/1:16,0:3:0:0,0,0	0/0:29,0:29:39.10:0,39,1703	1/1:15,0:14:15.03:308,15,0	1/1:8,4:10:27.09:622,27,0	0/0:39,0:33:8.75:0,9,1605	0/0:12,0:11:12.04:0,12,421	0/0:20,0:20:54.13:0,54,2176	0/0:14,0:14:19.88:0,20,883	0/0:14,0:14:32.90:0,33,1451	0/0:13,0:13:26.71:0,27,1200	0/0:21,0:20:50.95:0,51,1783	1/1:19,3:22:31.92:779,32,0	0/1:19,0:19:76.69:581,0,77	1/1:13,1:13:21.96:484,22,0	0/0:31,0:29:68.35:0,68,2904	0/0:18,0:16:36.33:0,36,1148	0/0:19,0:19:47.65:0,48,1522	0/0:4,0:2:6.02:0,6,260	0/0:14,0:14:29.91:0,30,1189	0/0:14,0:14:39.11:0,39,1666	0/0:15,0:15:33.42:0,33,1528	0/0:19,0:19:41.84:0,42,1805	0/0:21,0:21:53.84:0,54,1835	0/0:20,0:19:29.76:0,30,1076	0/0:10,0:7:15.05:0,15,629
chr10	92281958	.	TTTTGGGGTTC	T	2909.85	PASS	AB=0.974;AC=12;AF=0.214;AN=56;BaseQRankSum=1.527;DP=500;FS=8.856;HRun=0;HaplotypeScore=147.2559;InbreedingCoeff=0.8002;MQ=55.78;MQ0=27;MQRankSum=-7.348;QD=28.25;ReadPosRankSum=-4.416;VQSLOD=1.4173;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:43.53:0,44,2569	1/1:7,0:7:11.40:227,11,0	0/0:21,0:9:14.56:0,15,266	0/1:16,0:3:0:0,0,0	0/0:30,0:30:43.69:0,44,1702	1/1:11,3:13:15.03:340,15,0	1/1:11,1:10:27.09:597,27,0	0/0:37,0:31:7.94:0,8,1423	0/0:13,0:12:11.98:0,12,377	0/0:20,0:20:57.20:0,57,2134	0/0:14,0:14:19.42:0,19,820	0/0:14,0:14:32.83:0,33,1318	0/0:11,0:11:26.77:0,27,1096	0/0:22,0:21:53.89:0,54,1754	1/1:22,0:22:31.92:723,32,0	0/1:17,1:18:62.58:698,0,63	1/1:13,1:13:21.54:497,22,0	0/0:31,0:29:67.98:0,68,2634	0/0:17,0:15:36.32:0,36,1071	0/0:19,0:19:47.99:0,48,1384	0/0:4,0:2:6.02:0,6,233	0/0:15,0:15:35.96:0,36,1288	0/0:14,0:14:39.12:0,39,1538	0/0:15,0:15:33.37:0,33,1400	0/0:19,0:19:41.16:0,41,1694	0/0:21,0:21:53.75:0,54,1667	0/0:20,0:19:29.66:0,30,969	0/0:10,0:7:15.05:0,15,564
chr10	92281961	.	T	TTG	2905.13	PASS	AB=0.917;AC=20;AF=0.357;AN=56;BaseQRankSum=-4.405;DP=456;FS=11.438;HRun=0;HaplotypeScore=78.4705;InbreedingCoeff=0.5091;MQ=54.71;MQ0=29;MQRankSum=0.566;QD=13.83;ReadPosRankSum=-1.982;VQSLOD=1.8258;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:42.36:0,42,566	0/0:2,0:3:7.46:0,7,29	0/0:20,0:7:2.95:0,3,57	0/1:14,0:2:0:0,0,0	1/1:1,22:28:53.64:668,54,0	0/1:5,0:6:11.06:11,0,24	0/1:10,0:9:24.82:25,0,25	0/1:28,0:22:37.59:38,0,154	1/1:3,10:12:11.86:135,12,0	0/0:21,0:21:60.01:0,60,637	0/0:11,0:11:23.98:0,24,246	0/0:12,0:12:32.46:0,32,345	0/0:11,0:11:26.91:0,27,289	0/0:21,0:20:49.95:0,50,469	0/0:5,0:11:8.11:0,8,62	0/1:5,1:12:34.24:34,0,48	0/0:4,0:7:8.06:0,8,42	0/0:33,0:31:66.91:0,67,682	1/1:4,11:17:29:382,29,0	1/1:2,14:20:47.85:647,48,0	1/1:1,3:3:6.02:89,6,0	0/0:16,0:16:35.38:0,35,325	0/0:15,0:15:19.45:0,19,382	0/0:15,0:15:32.83:0,33,367	0/0:20,0:20:43.81:0,44,405	0/1:6,13:22:35.93:459,0,36	1/1:3,15:19:26.83:406,27,0	1/1:4,5:7:11.14:201,11,0
chr10	92282457	.	CTGTGTG	C	2546.75	PASS	AB=0.793;AC=14;AF=0.259;AN=54;BaseQRankSum=2.208;DP=805;FS=1.219;HRun=0;HaplotypeScore=214.5658;InbreedingCoeff=0.6923;MQ=57.94;MQ0=4;MQRankSum=-7.909;QD=13.26;ReadPosRankSum=0.808;VQSLOD=3.1178;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:75.22:0,75,1976	0/0:2,0:8:17.27:0,17,229	./.	0/0:36,0:30:9:0,9,152	0/0:9,6:16:0:0,0,0	0/0:21,0:24:42.13:0,42,1092	0/0:31,0:34:45.15:0,45,1282	0/1:27,1:29:50.36:50,0,130	1/1:9,14:25:36.11:666,36,0	0/0:25,0:25:30.10:0,30,672	0/0:13,0:17:12.44:0,12,160	0/0:25,0:39:33.44:0,33,650	0/0:21,0:32:18.53:0,19,331	0/0:36,0:48:20.34:0,20,296	0/0:25,0:48:65.98:0,66,851	0/0:44,0:54:99:0,113,3031	0/0:18,0:25:30.08:0,30,377	0/0:14,0:21:18.53:0,19,423	1/1:18,6:25:15.70:346,16,0	1/1:6,9:16:11.93:165,12,0	1/1:29,8:37:3:62,3,0	0/0:15,0:22:15:0,15,181	0/0:21,0:25:6.02:0,6,153	0/0:21,0:30:8.61:0,9,180	0/0:15,0:29:30.09:0,30,585	0/1:12,10:26:33.24:621,0,33	1/1:11,12:24:23.90:410,24,0	1/1:3,6:10:21.07:405,21,0
chr10	92282679	.	GTTGT	G	8959.39	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=17.746;DP=856;FS=4.193;HRun=0;HaplotypeScore=144.7309;InbreedingCoeff=0.9930;MQ=64.93;MQ0=1;MQRankSum=-2.770;QD=33.31;ReadPosRankSum=4.516;VQSLOD=4.9526;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,150,3631	0/0:9,0:9:12.04:0,12,298	0/0:35,0:34:69.23:0,69,1536	0/0:26,0:23:48.14:0,48,1058	0/0:18,0:18:36.12:0,36,891	0/0:32,0:32:78.27:0,78,1915	0/0:30,0:30:81.28:0,81,1874	0/0:33,0:33:75.23:0,75,1630	0/0:36,0:36:87.26:0,87,2011	1/1:6,25:31:78.26:1272,78,0	1/1:1,16:17:39.13:612,39,0	1/1:4,32:36:75.26:1266,75,0	1/1:11,24:35:62.76:1050,63,0	1/1:8,27:34:54.18:912,54,0	0/0:53,1:54:93.79:0,94,3261	0/0:44,0:44:99:0,102,2455	0/0:39,0:39:96.32:0,96,2273	1/1:4,14:18:33.11:557,33,0	0/0:27,0:27:48.15:0,48,1136	0/0:37,0:37:84.75:0,85,2002	0/0:56,1:57:93.82:0,94,3324	1/1:1,16:17:39.13:641,39,0	1/1:5,23:28:60:1008,60,0	1/1:8,23:31:60.20:996,60,0	1/1:3,17:20:39.13:645,39,0	0/0:19,0:19:45.11:0,45,1033	0/0:25,0:25:66.23:0,66,1594	0/0:8,0:8:15.05:0,15,319
chr10	92283021	.	T	TCA	8333.56	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=5.014;DP=791;FS=4.450;HRun=0;HaplotypeScore=191.6908;InbreedingCoeff=0.9542;MQ=58.00;MQ0=7;MQRankSum=2.854;QD=13.98;ReadPosRankSum=1.915;VQSLOD=4.5875;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,105,1338	0/0:9,0:9:2.82:0,3,142	0/0:37,0:22:53.24:0,53,635	0/0:37,0:29:58.98:0,59,569	1/1:18,0:18:21.18:51,21,0	1/1:25,0:26:25.23:61,25,0	1/1:32,0:32:31.32:76,31,0	1/1:37,0:36:40.69:99,41,0	1/1:26,0:26:23.67:57,24,0	1/1:3,19:22:57.19:952,57,0	1/1:3,11:14:18.06:303,18,0	1/1:12,26:37:57.48:962,57,0	1/1:1,21:22:57.19:960,57,0	1/1:8,21:29:53.17:835,53,0	0/0:33,0:33:31.74:0,32,755	1/1:34,0:34:31.84:79,32,0	0/0:38,0:38:90.29:0,90,1157	1/1:4,23:27:68.40:1075,68,0	1/1:23,0:23:18.90:45,19,0	1/1:21,0:20:20.41:49,20,0	1/1:64,0:63:69.56:168,70,0	1/1:5,26:28:42.14:709,42,0	1/1:9,17:25:39.13:655,39,0	1/1:7,17:23:27.05:455,27,0	1/1:7,13:20:38.23:577,38,0	1/1:21,0:20:22.43:54,22,0	1/1:26,0:25:27.98:68,28,0	1/1:14,0:14:17.44:42,17,0
chr10	92283022	.	C	CA	13208.76	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=9.661;DP=806;FS=3.601;HRun=1;HaplotypeScore=165.9537;InbreedingCoeff=0.3501;MQ=57.68;MQ0=8;MQRankSum=0.284;QD=21.76;ReadPosRankSum=3.842;VQSLOD=5.1287;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,111,1426	0/0:10,0:10:11.14:0,11,188	0/0:38,0:21:56.77:0,57,710	0/0:38,0:31:73.23:0,73,858	1/1:1,18:19:51.17:764,51,0	1/1:4,22:26:69.13:962,69,0	1/1:2,30:32:75.25:1123,75,0	1/1:3,34:36:99:1492,102,0	1/1:3,24:27:60.20:894,60,0	0/1:23,0:23:18.40:20,0,18	1/1:14,0:14:7.59:17,8,0	0/1:39,0:38:12.21:12,0,125	0/1:22,0:22:12.04:23,0,12	0/1:28,0:28:14.72:18,0,15	0/0:33,0:33:46.30:0,46,826	1/1:2,33:35:84.17:1181,84,0	0/0:38,0:38:99:0,99,1280	0/1:27,0:27:20.52:21,0,51	1/1:6,20:27:36.59:893,37,0	1/1:1,21:21:60.07:820,60,0	1/1:4,62:65:99:2470,166,0	0/1:31,0:28:10.59:11,0,88	0/1:26,0:25:14.13:14,0,21	0/1:24,0:23:6.50:6,0,60	0/1:20,0:20:9.41:9,0,53	1/1:2,20:20:57.19:850,57,0	1/1:1,25:25:66.22:989,66,0	1/1:1,13:14:42.14:619,42,0
chr10	92283060	.	T	TAC	2897.09	PASS	AB=0.897;AC=28;AF=0.500;AN=56;BaseQRankSum=3.164;DP=885;FS=0.000;HRun=0;HaplotypeScore=208.3581;InbreedingCoeff=0.4947;MQ=48.66;MQ0=13;MQRankSum=-2.464;QD=5.85;ReadPosRankSum=-4.037;VQSLOD=2.0572;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:51:54.91:0,55,760	1/1:6,0:11:5.74:38,6,0	0/0:45,0:23:9.02:0,9,102	0/0:51,0:28:11.82:0,12,115	0/0:23,0:26:42.31:0,42,459	0/1:19,7:25:49.28:377,0,49	0/1:20,14:35:27.02:686,0,27	1/1:35,0:31:9.37:57,9,0	0/0:28,0:28:39.76:0,40,525	1/1:19,0:18:8.96:87,9,0	0/0:18,0:17:0.47:0,0,1	0/1:36,0:33:1.27:68,0,1	1/1:18,0:18:11.12:76,11,0	1/1:34,0:33:4.95:89,5,0	1/1:35,0:45:30.70:240,31,0	1/1:22,19:43:63.97:1053,64,0	0/1:36,0:39:12:147,0,12	1/1:20,0:19:0.56:39,1,0	0/0:22,0:20:28.18:0,28,318	0/0:32,0:31:50.59:0,51,534	0/0:73,1:74:55.65:0,56,1006	0/1:26,0:21:0:0,0,0	1/1:26,0:23:3.72:29,4,0	1/1:29,0:26:5.93:41,6,0	1/1:23,0:21:5.99:49,6,0	0/0:21,0:21:27.02:0,27,305	0/1:27,1:29:5.91:6,0,430	0/0:18,0:19:35.90:0,36,368
chr10	92283891	.	GA	G	1918.88	PASS	AB=0.702;AC=45;AF=0.804;AN=56;BaseQRankSum=2.803;DP=328;FS=6.393;HRun=13;HaplotypeScore=57.9482;InbreedingCoeff=0.1185;MQ=52.68;MQ0=7;MQRankSum=-1.502;QD=7.03;ReadPosRankSum=2.865;VQSLOD=2.1738;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:58.32:0,58,494	1/1:2,6:8:2.93:22,3,0	0/1:13,0:3:2.19:2,0,6	0/0:22,0:5:7.35:0,7,54	1/1:6,6:13:13.65:89,14,0	0/1:5,7:10:15.86:53,0,16	0/1:5,6:12:11.44:74,0,11	0/1:7,5:11:34.47:68,0,34	1/1:2,1:3:2.97:21,3,0	1/1:0,4:5:13.97:93,14,0	1/1:0,4:4:2.97:22,3,0	1/1:5,7:13:22.84:154,23,0	1/1:3,9:12:17.85:130,18,0	1/1:3,10:13:12.37:88,12,0	0/1:4,14:18:5.34:126,0,5	1/1:6,9:14:16.68:103,17,0	1/1:7,18:25:43.77:312,44,0	0/1:7,8:15:6.96:91,0,7	0/1:7,4:11:32.57:69,0,33	1/1:1,1:3:1.98:6,2,0	1/1:5,2:5:2.66:21,3,0	1/1:1,4:5:2.97:22,3,0	1/1:0,3:3:2.92:22,3,0	1/1:4,11:16:19.53:136,20,0	1/1:1,3:4:5.96:43,6,0	1/1:10,6:17:14.06:133,14,0	1/1:4,6:10:17.80:123,18,0	1/1:0,2:2:5.95:42,6,0
chr10	92283902	.	AAAG	A	1780.82	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=6.012;DP=417;FS=2.750;HRun=0;HaplotypeScore=77.4776;InbreedingCoeff=0.8903;MQ=55.71;MQ0=8;MQRankSum=-4.278;QD=11.06;ReadPosRankSum=-1.086;VQSLOD=2.5781;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:78.38:0,78,1149	0/0:7,0:7:8.60:0,9,50	0/0:24,0:6:4.16:0,4,39	0/0:25,0:6:11.29:0,11,71	1/1:11,0:11:29.28:243,29,0	1/1:13,0:11:11.58:107,12,0	1/1:13,0:13:14.63:182,15,0	1/1:19,0:18:29.53:170,30,0	1/1:6,0:6:10.12:59,10,0	0/0:10,0:10:22.51:0,23,183	0/0:6,0:6:11.90:0,12,92	0/0:15,0:15:22.86:0,23,220	0/0:14,0:14:20.03:0,20,156	0/0:12,0:12:18.72:0,19,151	0/0:16,0:16:25.43:0,25,192	1/1:12,7:17:23.63:231,24,0	0/0:33,0:32:66.19:0,66,537	0/0:15,0:15:29.72:0,30,262	1/1:28,0:28:52.28:282,52,0	1/1:6,0:6:8.60:55,9,0	1/1:7,0:7:9.12:63,9,0	0/0:4,0:4:2.85:0,3,21	0/0:7,0:7:20.62:0,21,144	0/0:17,0:17:26.16:0,26,179	0/0:4,0:4:8.67:0,9,58	1/1:19,0:19:24.01:262,24,0	1/1:15,0:14:23.79:249,24,0	1/1:5,0:5:13.36:94,13,0
chr10	92283905	.	GAA	G	3066.31	PASS	AB=0.857;AC=23;AF=0.411;AN=56;BaseQRankSum=2.911;DP=411;FS=0.950;HRun=13;HaplotypeScore=68.7225;InbreedingCoeff=0.8756;MQ=58.03;MQ0=6;MQRankSum=-3.387;QD=20.04;ReadPosRankSum=0.111;VQSLOD=3.0311;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:98.49:0,98,1347	0/0:6,0:6:8.97:0,9,96	0/0:23,0:6:12.28:0,12,87	0/0:24,1:7:7.98:0,8,55	1/1:0,11:11:30.05:301,30,0	1/1:1,9:8:15.04:158,15,0	1/1:7,6:13:30.05:313,30,0	1/1:2,14:15:39.09:412,39,0	0/1:5,1:6:4.79:112,0,5	0/0:11,0:11:27.06:0,27,359	0/0:7,0:7:15.02:0,15,191	0/0:15,0:15:38.73:0,39,418	0/0:14,0:14:27.51:0,28,310	0/0:12,0:12:21.02:0,21,268	0/0:17,0:17:28.45:0,28,336	1/1:11,9:18:15.82:228,16,0	0/0:33,0:32:81:0,81,1023	0/0:14,0:14:30.07:0,30,397	1/1:2,25:27:67.03:724,67,0	1/1:0,5:5:9.02:92,9,0	1/1:0,7:7:8.56:92,9,0	0/0:4,0:4:6.01:0,6,65	0/0:8,0:8:20.35:0,20,241	0/0:17,0:17:28.33:0,28,357	0/0:5,0:5:12:0,12,139	1/1:4,16:20:45.02:452,45,0	1/1:1,12:12:23.92:241,24,0	1/1:3,2:5:15.04:159,15,0
chr10	92284103	.	T	TC	537.69	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=3.882;DP=409;FS=15.989;HRun=0;HaplotypeScore=82.8000;InbreedingCoeff=0.1410;MQ=61.87;MQ0=0;MQRankSum=-3.828;QD=5.38;ReadPosRankSum=-5.868;VQSLOD=0.7469;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,109,1468	0/0:4,0:4:6.80:0,7,107	0/0:8,0:5:4.01:0,4,118	0/0:8,0:6:14.85:0,15,104	0/0:9,0:9:12.75:0,13,45	0/0:17,0:17:6.67:0,7,38	0/1:17,0:17:10.38:10,0,43	1/1:16,17:33:33.92:582,34,0	0/0:6,0:6:9.78:0,10,32	0/0:6,0:6:18.03:0,18,230	0/0:2,0:2:6.02:0,6,84	0/0:20,0:20:60.08:0,60,771	0/0:13,0:13:34.24:0,34,358	0/0:18,0:18:48.10:0,48,613	0/0:23,0:23:66.18:0,66,866	0/1:22,0:22:19.78:24,0,20	0/0:29,0:29:67.48:0,67,1075	0/0:19,0:19:51.06:0,51,615	0/1:8,0:8:16.59:18,0,17	0/0:4,0:4:3.38:0,3,12	0/0:16,0:16:13.43:0,13,44	0/0:4,0:4:7.45:0,7,123	0/0:8,0:8:23.95:0,24,286	0/0:25,0:25:75.17:0,75,993	0/0:11,0:11:25.44:0,25,333	0/0:15,0:15:1.16:0,1,28	0/1:20,0:19:29.84:30,0,44	0/0:5,0:5:7:0,7,20
chr10	92284105	.	T	TCCC	5217.03	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=12.887;DP=406;FS=4.122;HRun=3;HaplotypeScore=82.7877;InbreedingCoeff=0.8539;MQ=59.11;MQ0=0;MQRankSum=-3.928;QD=30.51;ReadPosRankSum=-1.004;VQSLOD=2.0996;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,1658	0/0:3,0:3:9.03:0,9,132	0/0:6,0:4:8.82:0,9,101	0/0:7,0:5:0.78:0,1,79	1/1:9,0:9:23.35:234,23,0	1/1:19,0:19:53.84:619,54,0	1/1:16,1:17:50.63:535,51,0	1/1:27,5:32:74.72:1039,75,0	1/1:6,0:6:17.71:163,18,0	0/0:6,0:6:18.06:0,18,287	0/0:2,0:2:6.02:0,6,95	0/0:21,0:21:57.18:0,57,877	0/0:12,0:12:30.06:0,30,447	0/0:18,0:18:54.18:0,54,839	0/0:23,0:23:66.13:0,66,974	1/1:19,0:19:56.95:711,57,0	0/0:29,0:29:84.28:0,84,1322	0/0:19,0:19:42.11:0,42,668	0/1:8,0:8:9.40:189,0,9	1/1:4,0:4:8.92:93,9,0	1/1:19,0:19:47.86:554,48,0	0/0:5,0:5:15.04:0,15,204	0/0:8,0:8:21.07:0,21,334	0/0:25,0:25:69.22:0,69,1039	0/0:11,0:11:30.10:0,30,451	1/1:15,0:15:38.85:439,39,0	1/1:18,0:17:44.34:475,44,0	1/1:5,0:5:15:166,15,0
chr10	92284251	.	G	GT	1863.35	PASS	AB=0.783;AC=20;AF=0.357;AN=56;BaseQRankSum=-6.468;DP=401;FS=1.596;HRun=12;HaplotypeScore=60.6270;InbreedingCoeff=0.7762;MQ=66.15;MQ0=0;MQRankSum=2.459;QD=14.22;ReadPosRankSum=-2.311;VQSLOD=3.4330;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,1:19:12.51:0,13,241	0/0:1,0:6:12:0,12,34	0/1:9,0:7:6.98:7,0,14	0/0:7,0:7:8.67:0,9,63	0/0:19,0:19:41.63:0,42,306	0/0:14,0:14:25.74:0,26,169	0/0:13,0:13:29.74:0,30,215	0/0:35,2:38:33.06:0,33,555	0/0:6,0:6:17.76:0,18,121	1/1:4,9:14:27.35:249,27,0	1/1:4,7:11:5.06:196,5,0	1/1:6,12:18:4.69:212,5,0	1/1:4,2:6:14.99:132,15,0	0/1:3,10:13:9.43:125,0,9	0/0:5,0:24:33.24:0,33,95	0/0:19,0:19:41.59:0,42,300	0/0:13,0:33:31.83:0,32,91	1/1:8,7:16:37.41:326,37,0	0/0:15,0:14:35.71:0,36,262	0/0:7,0:7:17.88:0,18,131	0/0:9,0:8:20.80:0,21,149	1/1:2,8:10:4.93:195,5,0	1/1:0,8:9:20.87:189,21,0	1/1:4,1:6:12.01:111,12,0	1/1:9,9:19:28.75:323,29,0	0/0:20,0:20:44.63:0,45,323	0/0:9,0:9:17.81:0,18,129	0/0:11,0:11:26.81:0,27,197
chr10	92284317	.	C	CT	2936.86	PASS	AB=0.750;AC=50;AF=0.893;AN=56;BaseQRankSum=-0.510;DP=389;FS=0.920;HRun=14;HaplotypeScore=92.7981;InbreedingCoeff=0.4553;MQ=69.19;MQ0=0;MQRankSum=-2.243;QD=8.07;ReadPosRankSum=0.419;VQSLOD=2.9509;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,2:15:32.19:32,0,75	1/1:1,0:5:11.32:55,11,0	0/0:15,0:15:21.51:0,22,121	0/0:8,0:8:8.31:0,8,52	1/1:13,0:14:8.79:58,9,0	1/1:12,0:13:27.95:142,28,0	1/1:5,0:5:2.96:19,3,0	1/1:36,0:36:23.49:130,23,0	1/1:6,0:6:5.77:27,6,0	1/1:7,3:10:17.97:149,18,0	1/1:6,19:25:22.61:302,23,0	1/1:13,5:19:32.82:270,33,0	0/1:4,4:8:7.24:68,0,7	1/1:12,2:14:5.81:120,6,0	1/1:7,3:18:21.75:214,22,0	1/1:14,0:14:13.10:55,13,0	1/1:21,0:30:56.02:310,56,0	1/1:6,12:20:40.21:316,40,0	1/1:14,0:13:18.18:121,18,0	1/1:14,0:14:11.43:60,11,0	1/1:5,0:5:0.47:1,0,0	1/1:4,3:7:11.99:102,12,0	1/1:5,3:8:11.99:103,12,0	1/1:4,2:6:8.98:73,9,0	1/1:11,2:13:14.97:125,15,0	1/1:21,0:21:16.02:74,16,0	1/1:14,0:14:19.23:89,19,0	1/1:9,0:9:11.30:57,11,0
chr10	92284377	.	AC	A	5327.46	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=5.979;DP=352;FS=2.377;HRun=3;HaplotypeScore=44.6176;InbreedingCoeff=0.9732;MQ=77.37;MQ0=0;MQRankSum=-4.793;QD=33.93;ReadPosRankSum=1.259;VQSLOD=5.0587;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.21:0,63,907	0/0:3,0:3:6.02:0,6,86	0/0:16,0:16:42.61:0,43,599	0/0:12,0:12:36.11:0,36,464	1/1:0,13:13:33.10:409,33,0	1/1:0,15:15:42.13:521,42,0	1/1:0,6:6:15.05:186,15,0	1/1:3,25:28:72.21:879,72,0	1/1:0,7:7:21.07:260,21,0	0/0:15,0:15:45.13:0,45,615	0/0:5,0:5:15.04:0,15,199	0/0:13,0:13:39.11:0,39,541	0/0:6,0:6:18.06:0,18,259	0/0:10,0:10:30.10:0,30,432	0/0:21,0:21:63.16:0,63,865	1/1:0,21:21:63.20:780,63,0	0/0:20,0:20:60.20:0,60,864	0/0:14,0:14:36.12:0,36,518	1/1:1,10:11:30.08:360,30,0	1/1:2,11:13:33.10:408,33,0	1/1:0,7:7:18.06:223,18,0	0/0:5,0:5:15.05:0,15,216	0/0:9,0:9:27.08:0,27,371	0/0:5,0:5:15.05:0,15,216	0/0:18,0:18:54.17:0,54,759	1/1:0,14:14:42.13:520,42,0	1/1:0,12:12:36.11:446,36,0	1/1:0,10:10:26.70:334,27,0
chr10	92284882	.	CA	C	13467.33	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.017;DP=500;FS=0.000;HRun=5;HaplotypeScore=62.6303;InbreedingCoeff=0.9825;MQ=91.73;MQ0=0;MQRankSum=-7.246;QD=31.25;ReadPosRankSum=5.720;VQSLOD=4.9069;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.23:0,78,1033	1/1:0,5:5:15.04:170,15,0	0/0:18,0:18:45.15:0,45,606	0/0:23,0:23:56.30:0,56,743	1/1:1,20:21:57.16:645,57,0	1/1:1,25:26:75.21:850,75,0	1/1:1,17:18:42.04:459,42,0	1/1:1,22:23:66.15:720,66,0	1/1:1,13:14:36.10:408,36,0	1/1:0,15:15:45.13:510,45,0	1/1:1,12:13:33.09:374,33,0	1/1:1,20:21:57.16:646,57,0	1/1:0,11:11:30.09:340,30,0	1/1:0,10:10:30.09:340,30,0	1/1:0,18:18:54.15:612,54,0	1/1:2,29:31:84.17:925,84,0	1/1:2,25:27:69.20:782,69,0	1/1:0,14:14:39.11:442,39,0	1/1:1,9:10:27.06:298,27,0	1/1:0,12:12:33.09:374,33,0	1/1:1,21:22:60.17:680,60,0	1/1:0,16:16:45.13:510,45,0	1/1:0,4:4:12.03:136,12,0	1/1:0,19:19:51.15:578,51,0	1/1:0,11:11:33.09:374,33,0	1/1:1,24:25:74.95:829,75,0	1/1:0,30:30:84.24:952,84,0	1/1:0,15:15:45.13:510,45,0
chr10	92286926	.	A	ATG	3903.49	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.664;DP=745;FS=6.699;HRun=0;HaplotypeScore=92.2996;InbreedingCoeff=0.9983;MQ=81.86;MQ0=0;MQRankSum=0.623;QD=47.03;ReadPosRankSum=1.562;VQSLOD=4.9534;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,138,1931	1/1:0,11:11:33.11:604,33,0	0/0:17,0:17:23.59:0,24,564	0/0:23,0:23:51.17:0,51,716	0/0:30,0:30:78.24:0,78,1081	0/0:20,0:20:57.19:0,57,814	0/0:35,0:35:99:0,102,1440	0/0:31,0:31:93.30:0,93,1302	0/0:19,0:19:51.15:0,51,712	0/0:31,0:31:84.28:0,84,1189	0/0:15,0:15:45.15:0,45,643	0/0:36,0:36:99:0,108,1488	0/0:37,0:37:99:0,108,1510	0/0:34,0:34:99:0,99,1371	1/1:0,33:33:93.32:1705,93,0	0/0:30,0:30:84.28:0,84,1204	1/1:2,36:39:87.30:1594,87,0	0/0:37,0:37:99:0,108,1524	0/0:17,0:17:51.17:0,51,728	0/0:16,0:16:48.16:0,48,667	0/0:53,0:53:99:0,135,1854	0/0:16,0:16:48.16:0,48,686	0/0:14,0:14:39.13:0,39,559	0/0:32,0:32:93.31:0,93,1327	0/0:19,0:19:54.18:0,54,774	0/0:21,0:21:60.20:0,60,860	0/0:19,0:19:54.17:0,54,751	0/0:9,0:9:24.06:0,24,325
chr10	92287178	.	CGACCTTGGT	C	11390.20	PASS	AB=0.515;AC=23;AF=0.411;AN=56;BaseQRankSum=15.809;DP=537;FS=8.928;HRun=0;HaplotypeScore=149.1957;InbreedingCoeff=0.9146;MQ=85.71;MQ0=0;MQRankSum=-14.549;QD=61.57;ReadPosRankSum=-1.353;VQSLOD=4.1344;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,5785	0/0:7,0:7:21.07:0,21,1027	0/0:21,0:21:60.18:0,60,2590	0/0:21,0:21:63.19:0,63,2795	1/1:2,9:11:18.06:462,18,0	1/1:1,11:12:24.08:650,24,0	1/1:5,17:22:39.13:1147,39,0	1/1:4,17:21:51.15:1348,51,0	1/1:0,17:17:45.15:1382,45,0	0/0:21,0:21:63.22:0,63,3072	0/0:12,0:12:36.12:0,36,1694	0/0:32,0:32:90.28:0,90,4110	0/0:28,0:28:84.29:0,84,3949	0/0:20,0:20:60.19:0,60,2723	0/0:31,0:31:93.32:0,93,4313	1/1:0,19:19:51.18:1580,51,0	0/0:26,0:26:78.27:0,78,3641	0/0:28,0:28:84.29:0,84,4044	1/1:1,16:17:48.12:1254,48,0	1/1:1,8:9:21.07:642,21,0	1/1:4,14:18:15.05:441,15,0	0/0:12,0:12:36.12:0,36,1696	0/0:6,0:6:15.05:0,15,736	0/0:29,0:29:87.30:0,87,4157	0/0:17,0:17:48.16:0,48,2170	0/1:1,16:17:99:1277,0,99	1/1:3,14:17:27.09:834,27,0	1/1:0,5:5:12.04:372,12,0
chr10	92287294	.	T	TA	3575.78	PASS	AB=0.958;AC=32;AF=0.571;AN=56;BaseQRankSum=-4.483;DP=388;FS=8.990;HRun=11;HaplotypeScore=48.2891;InbreedingCoeff=0.7479;MQ=75.62;MQ0=0;MQRankSum=-3.481;QD=15.55;ReadPosRankSum=0.115;VQSLOD=3.6486;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:30:70.66:0,71,535	1/1:3,5:8:15.03:152,15,0	0/0:29,0:18:16.70:0,17,102	0/1:13,0:12:21.65:22,0,47	1/1:8,15:23:18.89:373,19,0	1/1:1,0:10:28.53:148,29,0	1/1:1,0:6:8.52:43,9,0	1/1:9,20:25:7.61:424,8,0	1/1:3,3:6:8.76:73,9,0	0/0:13,0:13:29.83:0,30,228	0/0:8,0:9:22.95:0,23,168	0/0:8,0:8:11.95:0,12,93	0/0:15,0:16:40.88:0,41,307	0/0:11,0:11:23.90:0,24,186	1/1:4,10:14:27.05:274,27,0	1/1:4,0:19:39.73:200,40,0	1/1:7,22:30:42.71:589,43,0	0/0:18,0:20:54.84:0,55,402	1/1:5,7:13:6.64:225,7,0	1/1:1,8:9:24.05:244,24,0	1/1:0,1:1:3.01:30,3,0	0/0:8,0:8:17.92:0,18,137	0/0:5,0:5:5.97:0,6,46	0/0:8,0:9:25.95:0,26,192	0/1:10,1:11:12.53:13,0,96	1/1:3,15:18:25:423,25,0	1/1:2,8:10:5.39:222,5,0	1/1:2,5:7:12.02:122,12,0
chr10	92287410	.	GAAAAGGAAA	G	1831.72	PASS	AB=1.000;AC=16;AF=0.296;AN=54;BaseQRankSum=2.881;DP=265;FS=13.399;HRun=0;HaplotypeScore=93.3224;InbreedingCoeff=0.5853;MQ=53.23;MQ0=9;MQRankSum=-2.995;QD=25.44;ReadPosRankSum=-1.321;VQSLOD=1.7741;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.16:0,60,2380	0/0:3,0:3:6.02:0,6,101	0/0:11,0:3:4.83:0,5,47	0/0:5,0:4:10.78:0,11,91	1/1:2,5:6:9.02:263,9,0	0/1:7,0:6:49.77:50,0,147	0/0:5,0:4:6.02:0,6,117	0/0:32,0:26:27.44:0,27,300	1/1:1,1:2:3.01:90,3,0	0/0:4,0:3:9.03:0,9,417	0/0:7,0:7:12.04:0,12,351	0/0:4,0:4:3.01:0,3,138	0/0:5,0:5:12.04:0,12,357	0/0:7,0:7:18.02:0,18,574	0/0:8,0:8:15.87:0,16,196	0/1:11,0:11:38.78:39,0,358	0/0:25,0:22:45.88:0,46,434	0/0:32,0:29:75.20:0,75,2881	1/1:5,8:13:29.93:509,30,0	1/1:2,2:4:6.02:179,6,0	./.	0/0:3,0:3:6.02:0,6,224	0/0:3,0:3:9.03:0,9,265	0/0:3,0:2:6.02:0,6,278	0/0:13,0:13:33.11:0,33,1276	1/1:3,8:11:20.90:426,21,0	1/1:0,9:9:5.90:181,6,0	1/1:1,5:5:9.03:270,9,0
chr10	92287415	.	GGAAA	G	3489.32	PASS	AB=1.000;AC=29;AF=0.537;AN=54;BaseQRankSum=4.655;DP=257;FS=16.215;HRun=0;HaplotypeScore=67.5991;InbreedingCoeff=0.7226;MQ=64.27;MQ0=7;MQRankSum=-6.123;QD=22.81;ReadPosRankSum=-1.816;VQSLOD=1.0804;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.56:0,58,1321	1/1:1,0:3:5.89:36,6,0	0/0:13,0:4:3.89:0,4,34	0/1:11,0:8:13.61:14,0,46	1/1:6,0:5:9.01:90,9,0	1/1:7,0:6:17.95:226,18,0	1/1:4,0:3:5.95:53,6,0	1/1:22,17:33:90.94:1307,91,0	1/1:1,0:1:3.01:32,3,0	0/0:4,0:4:12.04:0,12,282	0/0:6,0:6:11.87:0,12,172	0/0:1,0:1:3.01:0,3,82	0/0:4,0:4:11.93:0,12,202	0/0:7,0:7:15.04:0,15,315	1/1:8,0:8:20.43:194,20,0	1/1:11,0:11:27.43:381,27,0	1/1:24,0:22:48.70:463,49,0	0/0:28,0:25:69.85:0,70,1592	1/1:11,0:11:29.92:279,30,0	1/1:2,0:2:6.01:63,6,0	./.	0/0:2,0:2:5.93:0,6,96	0/0:3,0:3:8.93:0,9,121	0/0:3,0:2:6.02:0,6,163	0/0:11,0:11:32.96:0,33,685	1/1:10,0:9:20.89:193,21,0	1/1:9,0:9:5.53:64,6,0	1/1:5,0:5:9.02:95,9,0
chr10	92287422	.	AAAAAT	A	2335.03	PASS	AB=1.000;AC=22;AF=0.407;AN=54;BaseQRankSum=3.808;DP=266;FS=0.542;HRun=0;HaplotypeScore=79.3619;InbreedingCoeff=0.2231;MQ=76.73;MQ0=4;MQRankSum=-5.919;QD=13.04;ReadPosRankSum=-0.063;VQSLOD=2.7629;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.12:0,60,1464	1/1:3,0:3:3:32,3,0	0/1:17,0:8:1.84:2,0,23	0/1:13,0:11:22.04:22,0,229	0/1:6,0:5:24.84:51,0,25	1/1:5,0:4:10.52:53,11,0	0/0:3,0:3:2.12:0,2,15	1/1:34,13:41:91.89:1156,92,0	1/1:1,0:1:2.88:15,3,0	0/0:4,0:4:12.04:0,12,288	0/0:3,0:3:6.02:0,6,123	0/0:2,0:2:3.01:0,3,72	0/0:2,0:2:6.02:0,6,132	0/0:6,0:6:12.04:0,12,289	1/1:8,0:8:18.88:281,19,0	0/1:12,0:12:25.52:91,0,26	1/1:23,0:20:44.47:655,44,0	0/0:28,0:26:63.13:0,63,1299	0/1:12,0:11:25.73:26,0,177	1/1:2,0:2:5.82:33,6,0	./.	0/0:2,0:2:3.01:0,3,59	0/0:3,0:3:8.94:0,9,132	0/0:2,0:2:6.02:0,6,134	0/0:11,0:11:27.09:0,27,604	0/1:11,0:10:39.02:39,0,186	0/1:11,0:11:17.01:17,0,49	0/1:6,0:6:6.35:34,0,6
chr10	92287423	.	AAAAT	A	2066.64	PASS	AB=1.000;AC=25;AF=0.463;AN=54;BaseQRankSum=4.945;DP=263;FS=6.176;HRun=0;HaplotypeScore=75.0346;InbreedingCoeff=0.3689;MQ=77.07;MQ0=4;MQRankSum=-5.605;QD=11.36;ReadPosRankSum=0.478;VQSLOD=1.8425;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.05:0,57,1177	1/1:2,1:3:2.80:13,3,0	0/1:17,0:8:2.86:3,0,17	0/1:15,0:11:22.17:22,0,172	0/1:6,0:5:7.87:15,0,8	1/1:5,0:4:12.04:194,12,0	1/1:3,0:3:5.95:55,6,0	1/1:46,0:40:65.31:779,65,0	1/1:1,0:1:2.50:9,2,0	0/0:4,0:4:12.04:0,12,232	0/0:3,0:3:5.98:0,6,77	0/0:2,0:2:3.01:0,3,58	0/0:2,0:2:6.01:0,6,79	0/0:6,0:6:12.04:0,12,232	1/1:3,5:8:20.87:211,21,0	1/1:12,0:12:29.86:406,30,0	1/1:15,7:19:44.61:480,45,0	0/0:27,0:25:62.89:0,63,963	0/1:12,0:11:4.94:5,0,87	1/1:2,0:2:4.87:17,5,0	./.	0/0:1,0:1:3:0,3,28	0/0:3,0:3:8.94:0,9,119	0/0:2,0:2:6.02:0,6,102	0/0:11,0:11:27.04:0,27,454	0/1:11,0:10:16.22:16,0,128	0/1:12,0:12:3.96:4,0,82	0/1:6,0:6:7.87:14,0,8
chr10	92287424	.	AAAT	A	1439.25	PASS	AB=1.000;AC=24;AF=0.444;AN=54;BaseQRankSum=6.937;DP=262;FS=1.191;HRun=0;HaplotypeScore=73.2289;InbreedingCoeff=0.4848;MQ=78.84;MQ0=4;MQRankSum=-6.052;QD=9.11;ReadPosRankSum=0.150;VQSLOD=2.5925;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.09:0,54,969	1/1:3,0:3:2.87:15,3,0	1/1:17,0:9:0.30:9,0,0	0/1:15,0:11:29.28:29,0,136	0/1:6,0:5:8.86:10,0,9	1/1:1,4:4:12.04:141,12,0	1/1:2,1:3:2.72:17,3,0	1/1:46,0:40:36.59:602,37,0	1/1:1,0:1:1.55:4,2,0	0/0:4,0:4:12.04:0,12,176	0/0:3,0:3:6.02:0,6,75	0/0:2,0:2:3.01:0,3,44	0/0:2,0:2:6.02:0,6,76	0/0:5,0:5:12.04:0,12,176	1/1:7,0:7:19.65:157,20,0	1/1:2,10:12:26.58:296,27,0	1/1:22,0:19:37.74:317,38,0	0/0:26,0:24:56.99:0,57,750	0/0:12,0:11:11.77:0,12,99	1/1:2,0:2:3.11:8,3,0	./.	0/0:1,0:1:3.01:0,3,33	0/0:3,0:3:8.61:0,9,72	0/0:2,0:2:6.02:0,6,77	0/0:12,0:12:27.05:0,27,360	0/1:11,0:10:3.11:3,0,75	0/0:12,0:12:4.32:0,4,90	0/1:6,0:6:2.83:3,0,11
chr10	92287425	.	A	AAT	1973.55	PASS	AB=1.000;AC=31;AF=0.620;AN=50;BaseQRankSum=-3.517;DP=268;FS=2.025;HRun=0;HaplotypeScore=71.6537;InbreedingCoeff=0.6164;MQ=80.04;MQ0=4;MQRankSum=2.540;QD=17.47;ReadPosRankSum=1.335;VQSLOD=3.7645;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:42.07:0,42,470	./.	0/0:18,0:10:1.97:0,2,27	0/0:15,0:11:3.07:0,3,34	1/1:6,0:5:6.66:26,7,0	0/0:5,0:4:8.79:0,9,37	0/0:3,0:3:0:0,0,0	0/0:47,0:41:91.40:0,91,673	1/1:1,0:1:1.55:4,2,0	1/1:0,5:5:15.02:213,15,0	1/1:2,1:3:3.01:48,3,0	1/1:0,2:2:3.01:48,3,0	1/1:4,0:4:3.01:37,3,0	1/1:0,5:6:12.04:190,12,0	0/0:7,0:7:12.16:0,12,78	0/0:12,0:12:23.06:0,23,123	0/0:22,0:19:41.55:0,42,262	1/1:7,18:25:45.11:688,45,0	1/1:12,0:11:24.76:181,25,0	1/1:2,0:2:3.11:8,3,0	./.	./.	1/1:2,1:3:8.90:85,9,0	1/1:1,1:2:3.01:48,3,0	1/1:2,10:12:21.54:335,22,0	1/1:11,0:10:22.26:154,22,0	0/1:11,0:11:9.44:44,0,9	1/1:6,0:6:8.39:33,8,0
chr10	92287777	.	T	TCC	2704.05	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.910;DP=684;FS=5.740;HRun=6;HaplotypeScore=118.0309;InbreedingCoeff=0.9656;MQ=67.19;MQ0=1;MQRankSum=-2.857;QD=40.36;ReadPosRankSum=1.559;VQSLOD=2.3280;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:75.18:0,75,887	1/1:1,3:4:9.03:152,9,0	0/0:18,0:18:23.97:0,24,273	0/0:5,0:5:12.02:0,12,139	0/0:32,0:32:69.20:0,69,829	0/0:26,0:26:72.22:0,72,877	0/0:29,0:29:78.19:0,78,930	0/0:26,0:26:66.20:0,66,805	0/0:26,0:26:69.17:0,69,822	0/0:22,0:22:63.19:0,63,767	0/0:13,0:13:33.10:0,33,399	0/0:32,0:32:84.24:0,84,1005	0/0:21,0:21:57.18:0,57,692	0/0:33,0:33:93.24:0,93,1115	1/1:4,37:41:99:1821,108,0	0/0:54,0:54:99:0,138,1671	1/1:3,18:22:53.67:869,54,0	0/0:16,0:16:36.11:0,36,439	0/0:27,0:27:75.23:0,75,913	0/0:20,0:20:54.17:0,54,657	0/0:26,0:26:60.14:0,60,715	0/0:17,0:17:45.13:0,45,538	0/0:27,0:27:67.27:0,67,854	0/0:14,0:14:21.06:0,21,256	0/0:12,0:12:33.10:0,33,402	0/0:24,0:23:63.19:0,63,767	0/0:47,0:47:99:0,132,1603	0/0:14,0:14:39.12:0,39,476
chr10	92287824	.	T	TC	639.63	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.171;DP=434;FS=4.693;HRun=2;HaplotypeScore=68.0841;InbreedingCoeff=0.7989;MQ=73.33;MQ0=3;MQRankSum=-0.142;QD=31.98;ReadPosRankSum=-2.195;VQSLOD=2.6400;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.19:0,60,743	0/0:2,0:2:6.02:0,6,74	0/0:27,0:13:30.04:0,30,339	0/0:19,0:16:21.68:0,22,362	0/0:21,0:21:45.13:0,45,547	0/0:13,0:13:39.12:0,39,483	0/0:19,0:19:48.13:0,48,580	1/1:2,18:20:51.17:734,51,0	0/0:17,0:17:48.15:0,48,593	0/0:10,0:10:24.07:0,24,297	0/0:10,0:10:30.08:0,30,355	0/0:17,0:17:45.13:0,45,543	0/0:10,0:10:27.08:0,27,331	0/0:21,0:21:57.16:0,57,691	0/0:24,0:24:69.20:0,69,831	0/0:26,0:26:75.20:0,75,911	0/0:14,0:14:39.12:0,39,469	0/0:10,0:10:24.08:0,24,297	0/0:11,0:11:30.09:0,30,370	0/0:6,0:6:15.05:0,15,186	0/0:15,0:14:27.08:0,27,334	0/0:12,0:12:33.09:0,33,396	0/0:18,0:18:51.16:0,51,630	0/0:6,0:6:6.02:0,6,74	0/0:7,0:7:21.07:0,21,260	0/0:19,0:19:57.17:0,57,688	0/0:27,0:27:78.22:0,78,935	0/0:8,0:8:18.06:0,18,223
chr10	92287931	.	T	TC	387.96	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.716;DP=328;FS=7.738;HRun=2;HaplotypeScore=80.1035;InbreedingCoeff=0.8777;MQ=73.84;MQ0=5;MQRankSum=-0.527;QD=29.84;ReadPosRankSum=-1.878;VQSLOD=2.1778;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.24:0,81,992	0/0:3,0:3:9:0,9,96	0/0:23,0:17:33.33:0,33,460	0/0:15,0:12:29.44:0,29,332	0/0:9,0:9:15.05:0,15,184	0/0:10,0:10:24.07:0,24,295	0/0:9,0:9:24.08:0,24,296	1/1:1,12:13:33.06:483,33,0	0/0:8,0:8:18.04:0,18,208	0/0:12,0:12:36.11:0,36,445	0/0:9,0:9:18.06:0,18,221	0/0:20,0:20:51.16:0,51,625	0/0:7,0:7:18.06:0,18,221	0/0:11,0:11:30.09:0,30,358	0/0:9,0:9:27.07:0,27,320	0/0:13,0:13:33.10:0,33,405	0/0:13,0:13:27.08:0,27,332	0/0:10,0:10:23.96:0,24,242	0/0:6,0:6:18.06:0,18,223	0/0:9,0:9:24.07:0,24,294	0/0:12,0:12:27.08:0,27,331	0/0:13,0:13:36.11:0,36,442	0/0:10,0:10:27.07:0,27,315	0/0:9,0:9:15.05:0,15,184	0/0:13,0:13:30.09:0,30,362	0/0:10,0:9:27.08:0,27,333	0/0:13,0:13:39.11:0,39,470	0/0:10,0:10:30.09:0,30,369
chr10	92288379	.	AT	A	630.22	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.074;DP=659;FS=0.000;HRun=9;HaplotypeScore=81.5741;InbreedingCoeff=0.9223;MQ=74.57;MQ0=0;MQRankSum=1.499;QD=21.73;ReadPosRankSum=-4.295;VQSLOD=2.2808;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.13:0,66,745	0/0:5,0:5:15.04:0,15,173	0/0:25,0:24:45.29:0,45,514	0/0:23,0:21:50.41:0,50,502	0/0:25,0:25:75.22:0,75,864	0/0:20,0:21:57:0,57,637	0/0:21,0:21:57.09:0,57,632	1/1:2,27:29:80.99:725,81,0	0/0:20,0:20:60.18:0,60,693	0/0:27,0:27:72.20:0,72,816	0/0:21,0:21:54.16:0,54,623	0/0:30,1:32:62.65:0,63,956	0/0:20,2:22:8.27:0,8,603	0/0:24,0:24:69.19:0,69,786	0/0:27,0:29:78.04:0,78,859	0/0:37,1:38:83.86:0,84,1201	0/0:22,1:23:32.60:0,33,593	0/0:19,0:19:54.16:0,54,622	0/0:17,0:16:39.08:0,39,422	0/0:24,0:24:60.16:0,60,671	0/0:11,0:11:33.07:0,33,354	0/0:14,0:14:36.11:0,36,416	0/0:25,1:26:47.75:0,48,793	0/0:41,0:41:99:0,114,1316	0/0:17,0:17:42.10:0,42,465	0/0:29,0:29:81.22:0,81,913	0/0:34,0:33:99:0,102,1157	0/0:19,0:19:51.15:0,51,589
chr10	92289577	.	ACTT	A	8970.26	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=11.610;DP=588;FS=2.883;HRun=0;HaplotypeScore=93.0332;InbreedingCoeff=0.9934;MQ=72.40;MQ0=0;MQRankSum=-5.687;QD=43.54;ReadPosRankSum=1.248;VQSLOD=6.4848;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:78.27:0,78,1745	0/0:4,0:4:12.01:0,12,226	0/0:11,0:11:30.10:0,30,664	0/0:8,0:8:18.06:0,18,383	0/0:22,0:22:57.20:0,57,1291	0/0:23,0:23:42.14:0,42,923	0/0:21,0:21:60.21:0,60,1358	0/0:42,0:42:99:0,114,2438	0/0:13,0:13:36.12:0,36,816	1/1:2,23:25:69.24:1143,69,0	1/1:1,16:17:45.15:734,45,0	1/1:1,22:23:60.20:987,60,0	1/1:2,24:26:66.23:1099,66,0	1/1:0,30:30:87.30:1432,87,0	0/0:21,0:21:57.20:0,57,1292	0/0:26,0:26:66.20:0,66,1408	0/0:24,0:24:66.23:0,66,1495	1/1:1,20:21:54.18:885,54,0	0/0:19,0:19:51.18:0,51,1141	0/0:13,0:13:33.11:0,33,741	0/0:26,0:26:70.47:0,70,1523	1/1:1,7:8:21.03:320,21,0	1/1:1,17:18:42.14:699,42,0	1/1:0,14:14:36.12:585,36,0	1/1:2,22:24:66.22:1086,66,0	0/0:27,1:28:31.33:0,31,1702	0/0:23,0:23:57.20:0,57,1288	0/0:27,0:27:54.19:0,54,1223
chr10	92289621	.	C	CTT	3146.90	PASS	AB=0.832;AC=29;AF=0.518;AN=56;BaseQRankSum=-2.141;DP=592;FS=2.438;HRun=13;HaplotypeScore=118.1487;InbreedingCoeff=0.7667;MQ=69.82;MQ0=0;MQRankSum=-1.202;QD=9.96;ReadPosRankSum=-1.413;VQSLOD=2.1485;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:29:10.13:0,10,308	1/1:1,0:6:12.94:54,13,0	0/0:13,0:13:23.38:0,23,177	0/1:15,0:14:9.54:10,0,58	1/1:5,13:18:31.15:322,31,0	1/1:5,0:24:18:164,18,0	1/1:9,1:25:27:261,27,0	0/0:23,0:37:34.27:0,34,167	1/1:10,5:18:28.98:274,29,0	0/0:31,0:31:62.70:0,63,555	0/0:17,0:18:32.50:0,33,271	0/0:24,0:24:41.77:0,42,370	0/0:17,0:18:29.41:0,29,299	0/1:23,0:25:6.07:6,0,302	0/1:2,0:16:5.96:40,0,6	1/1:8,0:22:27.01:261,27,0	1/1:3,1:20:25.47:119,25,0	0/0:27,0:28:56.59:0,57,482	1/1:5,6:17:13.42:316,13,0	1/1:5,12:19:41.81:422,42,0	1/1:10,5:15:26.52:299,27,0	0/0:13,0:15:18.65:0,19,194	0/0:13,0:15:17:0,17,127	0/0:19,0:19:41.82:0,42,363	0/0:22,0:27:34.38:0,34,371	1/1:8,7:18:15.01:168,15,0	1/1:8,18:27:34.36:395,34,0	1/1:12,16:30:0.22:253,0,0
chr10	92291029	.	C	CAGA	9455.73	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-13.239;DP=615;FS=2.525;HRun=0;HaplotypeScore=85.9955;InbreedingCoeff=0.9976;MQ=84.27;MQ0=0;MQRankSum=-5.364;QD=50.30;ReadPosRankSum=5.116;VQSLOD=7.2843;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1903	0/0:10,0:10:27.09:0,27,441	0/0:21,0:21:57.19:0,57,910	0/0:17,0:17:45.02:0,45,637	0/0:18,0:18:48.16:0,48,779	0/0:24,0:24:69.24:0,69,1120	0/0:26,0:26:69.20:0,69,1069	0/0:25,0:25:72.22:0,72,1107	0/0:16,0:16:45.15:0,45,734	1/1:2,19:21:57.18:1204,57,0	1/1:1,11:12:27.09:573,27,0	1/1:5,21:28:57.20:1265,57,0	1/1:2,14:16:39.13:832,39,0	1/1:2,18:20:51.18:1137,51,0	0/0:23,0:23:66.22:0,66,1064	0/0:26,0:25:75.24:0,75,1198	0/0:42,0:42:99:0,123,1926	1/1:3,18:21:39.13:861,39,0	0/0:15,0:15:42.13:0,42,660	0/0:20,0:20:57.16:0,57,877	0/0:50,0:50:99:0,135,2145	1/1:1,6:7:18.06:402,18,0	1/1:0,11:10:24.08:504,24,0	1/1:1,40:43:96.25:2143,96,0	1/1:0,8:9:24.08:536,24,0	0/0:20,0:20:57.18:0,57,904	0/0:25,0:25:66.20:0,66,1042	0/0:8,0:8:24.08:0,24,387
chr10	92292591	.	AAAGTATACTC	A	16897.75	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=17.993;DP=650;FS=3.278;HRun=0;HaplotypeScore=203.1326;InbreedingCoeff=0.9983;MQ=84.89;MQ0=0;MQRankSum=-17.830;QD=77.16;ReadPosRankSum=2.813;VQSLOD=4.6637;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.25:0,78,3906	0/0:10,0:10:30.10:0,30,1601	0/0:28,0:28:78.27:0,78,3729	0/0:19,0:19:51.15:0,51,2306	0/0:22,0:22:63.22:0,63,3179	0/0:22,0:22:66.23:0,66,3341	0/0:30,0:30:84.29:0,84,4101	0/0:35,0:35:96.33:0,96,4898	0/0:25,0:25:75.26:0,75,3890	1/1:2,24:26:66.20:1947,66,0	1/1:2,24:26:66.18:2117,66,0	1/1:1,33:34:93.32:3089,93,0	1/1:1,27:28:66.23:2165,66,0	1/1:1,26:27:66.07:2162,66,0	0/0:27,0:27:81.28:0,81,4166	0/0:39,0:39:99:0,117,5992	0/0:13,0:13:39.13:0,39,2080	1/1:0,6:6:18.06:600,18,0	0/0:17,0:17:51.18:0,51,2417	0/0:20,0:20:60.21:0,60,2923	0/0:22,0:22:66.21:0,66,3298	1/1:1,19:20:48.13:1493,48,0	1/1:5,21:26:51.18:1625,51,0	1/1:0,16:16:24.08:800,24,0	1/1:1,9:10:27.09:900,27,0	0/0:24,0:24:72.25:0,72,3726	0/0:34,0:34:99:0,99,5045	0/0:17,0:17:51.17:0,51,2539
chr10	92293139	.	AG	A	1062.18	PASS	AB=0.959;AC=31;AF=0.554;AN=56;BaseQRankSum=0.141;DP=467;FS=0.526;HRun=1;HaplotypeScore=73.1115;InbreedingCoeff=0.3288;MQ=42.77;MQ0=28;MQRankSum=0.317;QD=3.83;ReadPosRankSum=-0.327;VQSLOD=-0.0405;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:13.23:0,13,384	0/1:7,0:7:4.44:9,0,4	0/1:65,6:15:32.68:47,0,33	0/0:71,2:11:13.28:0,13,73	1/1:23,0:20:31.92:209,32,0	1/1:11,0:10:0.72:23,1,0	1/1:9,0:6:7.71:42,8,0	1/1:13,0:7:11.92:93,12,0	0/0:6,0:6:0.89:0,1,3	0/0:21,1:21:15.43:0,15,192	0/0:17,0:16:6.02:0,6,216	0/0:12,0:12:9.01:0,9,89	1/1:9,0:8:4:36,4,0	0/1:8,1:8:6.33:34,0,6	1/1:8,0:7:2.97:20,3,0	1/1:15,0:15:12.24:80,12,0	1/1:7,0:7:11.37:47,11,0	0/0:12,0:10:1.56:0,2,31	0/1:16,1:14:10.73:143,0,11	0/1:17,1:16:9.19:94,0,9	1/1:3,0:2:1.25:3,1,0	0/1:7,0:7:14.06:14,0,37	0/1:12,0:12:2.01:2,0,147	0/0:4,0:2:4.74:0,5,17	0/0:20,0:20:26.33:0,26,189	1/1:3,6:9:12.53:108,13,0	1/1:16,0:14:6.05:105,6,0	1/1:11,0:10:25.47:126,25,0
chr10	92293150	.	A	AAAAG	2997.80	PASS	AB=1.000;AC=34;AF=0.630;AN=54;BaseQRankSum=-3.917;DP=449;FS=2.206;HRun=0;HaplotypeScore=92.3278;InbreedingCoeff=0.3284;MQ=43.06;MQ0=22;MQRankSum=-3.454;QD=10.86;ReadPosRankSum=-1.973;VQSLOD=2.4788;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:36.09:0,36,500	0/0:7,0:7:7.52:0,8,107	0/0:63,0:12:20.25:0,20,144	0/0:62,0:7:14.18:0,14,93	1/1:24,0:22:22.99:166,23,0	0/1:12,0:11:2.79:59,0,3	1/1:10,0:6:11.52:82,12,0	1/1:14,0:9:10.80:108,11,0	0/1:8,0:8:18.07:18,0,26	1/1:18,4:21:30.38:508,30,0	1/1:14,1:15:11.96:192,12,0	1/1:12,1:13:17.72:195,18,0	1/1:10,0:9:11.97:137,12,0	1/1:12,0:11:11.97:192,12,0	0/0:9,0:8:0:0,0,0	0/1:12,0:12:7.48:71,0,7	0/0:7,0:7:14.87:0,15,148	1/1:2,2:6:5.97:89,6,0	0/1:16,0:14:53.48:164,0,53	0/1:19,0:17:26.62:66,0,27	./.	1/1:8,0:8:14.91:174,15,0	1/1:2,11:15:21.07:431,21,0	1/1:1,1:2:3.01:71,3,0	1/1:8,10:20:18.02:339,18,0	0/1:11,0:11:0.93:40,0,1	0/1:14,0:13:2.15:35,0,2	0/1:11,0:11:19.57:32,0,20
chr10	92293233	.	CG	C	3213.92	PASS	AB=0.757;AC=40;AF=0.769;AN=52;BaseQRankSum=0.037;DP=229;FS=0.857;HRun=2;HaplotypeScore=47.8294;InbreedingCoeff=0.5077;MQ=30.42;MQ0=10;MQRankSum=-1.497;QD=18.26;ReadPosRankSum=-0.997;VQSLOD=3.3185;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:30.10:0,30,444	./.	0/0:3,0:2:2.98:0,3,22	0/0:5,0:3:9.02:0,9,101	1/1:1,16:15:35.52:408,36,0	0/0:13,0:13:3.61:0,4,105	0/1:14,1:13:31.61:32,0,81	1/1:3,4:6:17.99:196,18,0	1/1:1,5:6:8.98:96,9,0	1/1:5,6:10:24.03:275,24,0	1/1:2,5:5:3.01:39,3,0	1/1:3,12:15:33.92:387,34,0	1/1:1,7:7:12:135,12,0	1/1:1,5:7:8.98:96,9,0	1/1:0,8:6:9.03:115,9,0	0/0:16,0:15:1.34:0,1,76	0/1:2,3:4:7.33:68,0,7	1/1:0,3:3:6.02:77,6,0	1/1:2,3:4:11.87:127,12,0	1/1:0,11:11:24.90:288,25,0	./.	1/1:1,7:8:21.01:249,21,0	1/1:2,4:6:9.03:115,9,0	1/1:0,3:4:8.92:93,9,0	1/1:4,5:6:9.03:111,9,0	1/1:4,4:8:20.81:208,21,0	1/1:1,10:11:14.88:174,15,0	1/1:1,3:3:6.02:77,6,0
chr10	92293247	.	C	CAAAAAAAAA	7436.70	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=3.313;DP=298;FS=20.121;HRun=11;HaplotypeScore=88.2726;InbreedingCoeff=0.5654;MQ=47.01;MQ0=9;MQRankSum=-4.532;QD=27.44;ReadPosRankSum=-1.104;VQSLOD=0.3750;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:18:32.71:0,33,731	1/1:1,0:1:3:29,3,0	0/0:9,0:5:8.83:0,9,132	0/1:11,0:10:3.19:3,0,145	1/1:21,0:19:29.90:438,30,0	1/1:6,0:8:9.03:360,9,0	1/1:16,0:15:23.87:321,24,0	1/1:14,0:14:22.48:986,22,0	1/1:7,0:7:12.04:187,12,0	1/1:10,0:13:26.83:491,27,0	1/1:15,0:13:15.05:439,15,0	1/1:15,0:15:23.67:299,24,0	1/1:5,0:5:5.81:52,6,0	1/1:7,0:7:12.04:174,12,0	1/1:12,0:9:9.50:109,9,0	1/1:7,11:18:11.72:335,12,0	1/1:7,0:6:9.03:122,9,0	1/1:5,0:5:8.98:182,9,0	1/1:9,0:7:17.89:358,18,0	1/1:14,0:14:17.98:526,18,0	1/1:6,0:5:9.03:150,9,0	1/1:10,0:10:20.96:444,21,0	1/1:9,0:8:17.97:270,18,0	1/1:7,0:7:10.23:175,10,0	1/1:10,0:7:12.04:314,12,0	1/1:8,0:8:14.97:319,15,0	1/1:11,0:12:14.90:334,15,0	1/1:4,0:2:2.98:22,3,0
chr10	92293255	.	A	AAAAAAAAG	8331.97	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=3.097;DP=323;FS=39.410;HRun=0;HaplotypeScore=96.7250;InbreedingCoeff=0.7978;MQ=56.51;MQ0=7;MQRankSum=-4.672;QD=29.86;ReadPosRankSum=-1.591;VQSLOD=2.2609;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:42.02:0,42,856	1/1:2,0:2:6.01:65,6,0	0/0:10,0:6:11.86:0,12,164	0/0:15,0:13:19.85:0,20,283	1/1:17,0:17:38.91:494,39,0	1/1:3,0:10:9.03:338,9,0	1/1:17,0:16:26.78:329,27,0	1/1:2,0:24:58.91:1539,59,0	1/1:6,0:6:11.96:148,12,0	1/1:13,0:14:33.04:592,33,0	1/1:4,1:15:20.90:469,21,0	1/1:13,0:18:23.74:263,24,0	1/1:8,0:8:14.79:125,15,0	1/1:6,0:6:14.89:147,15,0	1/1:12,0:9:14.89:136,15,0	1/1:12,0:13:20.85:356,21,0	1/1:4,0:7:8.37:104,8,0	1/1:5,0:6:11.69:165,12,0	1/1:7,0:10:23.92:287,24,0	1/1:3,0:11:23.94:587,24,0	1/1:6,0:5:9.02:155,9,0	1/1:7,0:12:29.77:441,30,0	1/1:9,0:8:23.97:339,24,0	1/1:8,0:7:10.22:185,10,0	1/1:7,0:5:12.04:299,12,0	1/1:4,7:14:27.42:418,27,0	1/1:7,0:10:14.98:304,15,0	1/1:5,0:3:5.98:47,6,0
chr10	92293263	.	G	GAAAA	1616.04	PASS	AB=0.987;AC=27;AF=0.482;AN=56;BaseQRankSum=10.344;DP=334;FS=5.974;HRun=3;HaplotypeScore=108.8158;InbreedingCoeff=-0.3999;MQ=65.86;MQ0=4;MQRankSum=-7.990;QD=5.86;ReadPosRankSum=7.753;VQSLOD=-0.7247;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.11:0,48,769	1/1:2,0:2:1.13:3,1,0	0/0:12,0:8:4.88:0,5,103	0/0:17,0:15:34.27:0,34,426	0/1:13,0:13:56.97:67,0,57	1/1:7,1:8:9.03:149,9,0	0/1:11,1:11:28:73,0,28	0/1:31,0:30:99:312,0,188	0/1:11,0:11:30.23:30,0,119	0/1:16,0:16:99:103,0,110	1/1:13,0:12:14.47:186,14,0	0/1:17,0:16:33.03:33,0,126	0/0:7,0:7:5.18:0,5,44	0/1:9,0:9:0.21:0,0,42	0/1:13,0:10:52.38:52,0,85	0/1:11,0:11:54.19:67,0,54	0/1:9,0:9:30.84:34,0,31	0/1:9,0:9:50.73:66,0,51	0/1:19,0:17:43.86:44,0,190	0/1:11,0:11:29.48:158,0,29	0/1:9,0:8:5.75:6,0,64	0/1:13,0:13:54.62:92,0,55	0/1:10,0:8:24.78:25,0,56	0/1:8,1:8:52.36:53,0,52	1/1:7,0:5:8.73:62,9,0	0/1:12,0:12:39.98:61,0,40	0/1:11,1:11:49.94:98,0,50	0/0:5,0:4:8.99:0,9,74
chr10	92293675	.	AAT	A	3926.02	PASS	AB=0.944;AC=29;AF=0.518;AN=56;BaseQRankSum=7.364;DP=360;FS=4.350;HRun=0;HaplotypeScore=47.7212;InbreedingCoeff=0.8501;MQ=75.28;MQ0=1;MQRankSum=1.673;QD=21.57;ReadPosRankSum=0.986;VQSLOD=2.9524;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.16:0,48,792	1/1:0,4:4:12.04:150,12,0	0/0:9,0:8:2.03:0,2,6	0/0:15,0:12:12.24:0,12,109	0/0:15,0:15:36.12:0,36,577	0/0:13,0:13:36.12:0,36,592	0/0:9,0:9:18.06:0,18,297	1/1:14,26:40:28.67:849,29,0	0/0:4,0:4:12.04:0,12,198	1/1:1,6:7:18.06:225,18,0	1/1:3,6:9:18.06:225,18,0	1/1:2,4:6:15.05:185,15,0	1/1:4,7:11:18.06:225,18,0	1/1:3,5:8:15.05:188,15,0	1/1:1,5:6:12.04:150,12,0	0/0:20,0:20:45.15:0,45,737	1/1:6,21:27:57.18:713,57,0	1/1:0,14:14:36.12:450,36,0	0/0:17,1:18:13.83:0,14,756	0/0:7,0:7:12.04:0,12,186	0/0:14,0:14:33.11:0,33,545	1/1:3,2:5:3.01:38,3,0	1/1:6,6:12:18.06:225,18,0	1/1:4,4:8:12.04:150,12,0	1/1:2,6:8:12.04:150,12,0	0/0:19,1:20:4.60:0,5,603	0/0:16,0:16:30.10:0,30,495	0/1:16,1:17:1.42:1,0,498
chr10	92294175	.	TGATTTCA	T	26841.17	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=15.186;DP=627;FS=14.869;HRun=0;HaplotypeScore=161.3398;InbreedingCoeff=0.9652;MQ=71.07;MQ0=0;MQRankSum=-16.554;QD=56.04;ReadPosRankSum=1.844;VQSLOD=4.2316;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,4801	0/0:13,0:13:36.07:0,36,1174	0/0:22,0:22:66.23:0,66,2437	0/0:9,0:10:21.85:0,22,704	1/1:1,18:19:30.10:766,30,0	1/1:0,24:24:63.22:1606,63,0	1/1:4,15:19:30.10:773,30,0	1/1:5,30:35:90.29:2254,90,0	1/1:0,19:19:39.13:1007,39,0	1/1:2,17:19:48.14:1140,48,0	1/1:2,14:16:30.10:762,30,0	1/1:3,32:35:84.29:2106,84,0	1/1:4,29:33:63.22:1604,63,0	1/1:1,25:26:51.18:1321,51,0	0/0:34,0:34:96.33:0,96,3701	1/1:0,30:30:75.26:1918,75,0	0/0:26,0:26:75.26:0,75,2906	1/1:1,8:9:12.04:311,12,0	1/1:2,16:18:48.16:1245,48,0	1/1:0,25:25:63.22:1626,63,0	1/1:5,16:21:24.08:611,24,0	1/1:0,14:14:33.11:829,33,0	1/1:3,18:21:51.18:1320,51,0	1/1:3,10:13:11.86:310,12,0	1/1:0,20:20:60.21:1544,60,0	1/1:2,21:23:60.18:1501,60,0	1/1:1,35:36:84.29:2131,84,0	1/1:1,3:4:6.02:155,6,0
chr10	92295402	.	A	AAAC	37189.62	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-8.679;DP=946;FS=9.939;HRun=0;HaplotypeScore=123.5688;InbreedingCoeff=0.9995;MQ=73.02;MQ0=0;MQRankSum=-6.616;QD=47.19;ReadPosRankSum=5.574;VQSLOD=6.5974;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:69,0:69:99:0,172,2527	1/1:1,15:16:30.10:622,30,0	0/0:35,0:35:66.16:0,66,929	0/0:23,0:23:45.06:0,45,594	1/1:9,22:32:66.22:1306,66,0	1/1:2,23:25:72.25:1460,72,0	1/1:5,16:21:33.11:695,33,0	0/0:31,0:30:63.20:0,63,912	1/1:4,24:28:63.22:1292,63,0	1/1:7,36:45:99:2244,114,0	1/1:2,9:11:30.10:584,30,0	1/1:10,38:49:99:2311,114,0	1/1:5,42:48:99:2325,111,0	1/1:7,43:50:99:2573,126,0	1/1:4,56:62:99:3146,154,0	1/1:7,50:56:99:2916,141,0	1/1:5,27:32:66.23:1390,66,0	1/1:4,20:25:42.14:884,42,0	1/1:7,18:26:51.14:951,51,0	1/1:4,23:27:66.15:1228,66,0	1/1:7,33:40:84.29:1699,84,0	1/1:5,20:27:69.24:1417,69,0	1/1:8,17:26:48.16:1011,48,0	1/1:4,31:36:89.12:1824,89,0	1/1:2,17:19:51.17:1038,51,0	1/1:3,27:31:84.27:1709,84,0	1/1:4,36:42:93.32:1932,93,0	1/1:0,11:11:30.10:632,30,0
chr10	92295887	.	GAC	G	1449.37	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.763;DP=818;FS=5.122;HRun=0;HaplotypeScore=94.3733;InbreedingCoeff=0.9758;MQ=75.61;MQ0=0;MQRankSum=0.781;QD=37.16;ReadPosRankSum=-4.534;VQSLOD=3.9554;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,2202	0/0:9,0:9:27.09:0,27,522	0/0:19,0:19:42.17:0,42,896	0/0:19,0:19:53.68:0,54,974	0/0:29,0:29:87.28:0,87,1629	0/0:21,0:21:63.22:0,63,1217	0/0:33,0:33:96.26:0,96,1836	1/1:4,35:39:99:1544,105,0	0/0:24,0:24:72.23:0,72,1337	0/0:30,0:30:90.31:0,90,1732	0/0:5,0:5:15.05:0,15,290	0/0:46,0:46:99:0,132,2542	0/0:35,0:35:99:0,102,1959	0/0:57,0:57:99:0,172,3223	0/0:41,0:41:99:0,123,2358	0/0:40,0:40:99:0,117,2245	0/0:35,0:35:99:0,105,1981	0/0:27,0:27:75.26:0,75,1447	0/0:20,0:20:60.21:0,60,1144	0/0:25,0:25:69.22:0,69,1299	0/0:47,0:47:99:0,135,2574	0/0:27,0:27:81.28:0,81,1565	0/0:23,0:23:66.23:0,66,1274	0/0:26,0:26:78.27:0,78,1506	0/0:30,0:30:87.30:0,87,1673	0/0:38,0:38:99:0,114,2190	0/0:28,0:28:84.29:0,84,1613	0/0:6,0:6:18.06:0,18,312
chr10	92296863	.	TA	T	4832.98	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-3.600;DP=425;FS=5.597;HRun=6;HaplotypeScore=78.0398;InbreedingCoeff=0.8680;MQ=73.24;MQ0=2;MQRankSum=-0.432;QD=14.05;ReadPosRankSum=0.149;VQSLOD=4.1532;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.14:0,54,675	0/0:5,0:5:12.03:0,12,139	0/1:33,0:17:6.90:7,0,138	0/0:20,0:9:14.97:0,15,147	1/1:20,0:20:40.96:249,41,0	1/1:7,1:8:16.24:111,16,0	1/1:9,0:9:23.13:166,23,0	1/1:31,0:31:68.95:535,69,0	1/1:14,0:14:19.80:210,20,0	1/1:17,0:17:26.18:244,26,0	1/1:20,0:20:48.25:364,48,0	1/1:15,0:15:18.87:129,19,0	1/1:13,0:12:21.03:147,21,0	1/1:9,0:9:22.25:166,22,0	0/0:13,0:13:30.05:0,30,308	1/1:24,0:24:41.23:286,41,0	0/0:23,0:23:57.14:0,57,635	1/1:13,1:14:37.06:242,37,0	1/1:18,0:18:42.06:274,42,0	1/1:13,0:13:34.53:239,35,0	1/1:10,0:10:29.11:174,29,0	1/1:3,0:3:8.85:73,9,0	1/1:9,0:9:23.49:186,23,0	1/1:3,1:4:11.56:67,12,0	1/1:13,0:13:37.83:257,38,0	1/1:9,0:9:18.59:121,19,0	1/1:27,2:29:64.21:473,64,0	1/1:8,0:8:22.66:114,23,0
chr10	92296997	.	G	GA	7202.50	PASS	AC=44;AF=0.846;AN=52;BaseQRankSum=11.595;DP=449;FS=0.000;HRun=1;HaplotypeScore=152.0637;InbreedingCoeff=0.8171;MQ=30.95;MQ0=9;MQRankSum=-9.153;QD=21.76;ReadPosRankSum=-2.829;VQSLOD=3.9316;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:41:93.27:0,93,1176	0/0:13,1:13:12.10:0,12,319	./.	./.	1/1:1,11:11:15.01:199,15,0	1/1:0,16:9:24.01:326,24,0	1/1:5,11:13:30.06:416,30,0	1/1:8,17:22:60.13:839,60,0	1/1:3,14:11:4.86:294,5,0	1/1:1,16:15:39.13:576,39,0	1/1:1,12:8:11.95:129,12,0	1/1:2,26:17:48.04:657,48,0	1/1:2,5:6:14.98:197,15,0	1/1:4,17:13:32.89:386,33,0	0/0:30,0:30:69.16:0,69,872	1/1:4,29:17:42:545,42,0	0/0:23,0:20:45.15:0,45,579	1/1:1,5:4:8.96:108,9,0	1/1:3,11:6:15.02:200,15,0	1/1:2,16:11:27.02:376,27,0	1/1:1,7:7:14.98:197,15,0	1/1:3,15:14:29.99:395,30,0	1/1:1,8:5:9.03:133,9,0	1/1:1,1:2:3.01:39,3,0	1/1:0,10:6:15.05:217,15,0	1/1:1,17:13:33.11:493,33,0	1/1:2,17:12:30.10:437,30,0	1/1:1,3:4:3.48:45,3,0
chr10	92297036	.	AGT	A	4840.32	PASS	AB=0.533;AC=21;AF=0.375;AN=56;BaseQRankSum=2.145;DP=604;FS=1.289;HRun=0;HaplotypeScore=245.2651;InbreedingCoeff=0.9004;MQ=59.51;MQ0=3;MQRankSum=-7.144;QD=22.10;ReadPosRankSum=1.141;VQSLOD=4.4885;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,2251	0/0:12,0:12:33.07:0,33,386	0/0:24,0:17:50.91:0,51,879	0/0:33,0:29:60.25:0,60,898	1/1:0,16:16:27.08:335,27,0	1/1:5,9:14:29.01:357,29,0	1/1:6,12:18:18.06:224,18,0	0/0:30,0:28:22.68:0,23,222	1/1:4,19:23:52.34:613,52,0	0/0:22,0:21:38.68:0,39,252	0/0:13,0:13:8.48:0,8,55	0/0:37,0:35:62.64:0,63,412	0/0:17,0:17:18.99:0,19,211	0/0:23,0:22:42.59:0,43,271	0/0:34,0:34:75.23:0,75,925	1/1:8,28:34:75.10:930,75,0	0/0:29,0:27:60.06:0,60,750	0/0:13,0:11:17.99:0,18,107	1/1:5,12:14:19.06:358,19,0	1/1:6,9:15:21:241,21,0	1/1:8,15:22:24.55:298,25,0	0/0:14,0:13:17.91:0,18,133	0/0:14,0:13:17.80:0,18,130	0/0:12,0:12:5.58:0,6,33	0/0:13,0:12:13.82:0,14,82	1/1:6,22:27:43.91:718,44,0	1/1:4,17:21:57:666,57,0	0/1:1,7:8:6.94:100,0,7
chr10	92297175	.	CTG	C	8462.40	PASS	AB=0.857;AC=21;AF=0.375;AN=56;BaseQRankSum=13.571;DP=768;FS=0.302;HRun=0;HaplotypeScore=94.9767;InbreedingCoeff=0.9224;MQ=62.39;MQ0=0;MQRankSum=-2.232;QD=34.97;ReadPosRankSum=4.228;VQSLOD=7.2856;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,157,2838	0/1:5,1:6:27.88:28,0,205	0/0:15,0:15:41.97:0,42,674	0/0:19,0:19:51.17:0,51,934	0/0:35,0:35:93.32:0,93,1684	0/0:26,0:26:66.23:0,66,1182	0/0:36,0:36:99:0,102,1840	0/0:47,0:47:99:0,126,2262	0/0:24,0:24:69.24:0,69,1263	1/1:0,34:34:99:1441,102,0	1/1:0,13:13:33.11:470,33,0	1/1:0,38:38:81.27:1160,81,0	1/1:1,20:21:60.20:859,60,0	1/1:1,32:32:69.23:985,69,0	0/0:40,0:40:99:0,105,1915	0/0:50,0:50:99:0,132,2407	0/0:28,0:28:84.25:0,84,1457	1/1:0,21:21:51.17:731,51,0	0/0:23,0:23:66.22:0,66,1175	0/0:18,0:18:48.16:0,48,871	0/0:43,0:43:99:0,123,2202	1/1:1,23:24:60.20:857,60,0	1/1:0,10:11:24.08:343,24,0	1/1:1,19:20:54.18:774,54,0	1/1:0,21:21:57.19:815,57,0	0/0:29,1:30:44.34:0,44,1493	0/0:33,0:33:81.28:0,81,1465	0/0:6,0:6:18.06:0,18,330
chr10	92297586	.	GTAGAGCGCTTGCCTAGCGAGCGCAAGGCCC	G	18458.48	PASS	AC=40;AF=0.800;AN=50;BaseQRankSum=9.346;DP=339;FS=6.329;HRun=0;HaplotypeScore=241.4188;InbreedingCoeff=0.7066;MQ=40.10;MQ0=21;MQRankSum=-8.120;QD=77.88;ReadPosRankSum=-0.276;VQSLOD=3.1594;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.22:0,63,7024	0/0:2,0:1:3.01:0,3,349	./.	0/0:10,0:4:12.01:0,12,394	1/1:8,2:10:6.02:447,6,0	1/1:6,7:12:15.05:1193,15,0	1/1:9,4:11:12.04:914,12,0	./.	1/1:6,6:12:18.06:1432,18,0	1/1:10,10:18:30.08:1797,30,0	1/1:4,4:8:12.04:926,12,0	1/1:10,5:15:15.05:1193,15,0	1/1:3,7:9:21.07:1670,21,0	1/1:11,5:16:15.05:1193,15,0	0/0:22,0:21:54.19:0,54,6791	1/1:8,6:14:12.04:954,12,0	0/0:22,0:20:54.19:0,54,5610	1/1:4,1:5:3.01:239,3,0	1/1:9,0:6:3.01:38,3,0	1/1:9,8:16:21.07:1663,21,0	1/1:7,3:9:3.01:239,3,0	1/1:1,5:6:12.04:954,12,0	1/1:9,3:12:9.03:716,9,0	./.	1/1:9,5:13:15.05:1193,15,0	1/1:12,1:13:6.01:266,6,0	1/1:11,7:17:15.05:1193,15,0	1/1:1,1:1:3.01:239,3,0
chr10	92298244	.	A	ACAGTCTTG	60896.10	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-6.432;DP=783;FS=2.477;HRun=0;HaplotypeScore=185.8400;InbreedingCoeff=0.9976;MQ=58.55;MQ0=0;MQRankSum=-16.981;QD=96.35;ReadPosRankSum=-0.777;VQSLOD=5.0415;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.23:0,72,2004	0/0:16,0:16:45.15:0,45,1223	0/0:13,0:13:21.90:0,22,342	0/0:11,0:11:20.71:0,21,338	1/1:15,19:38:84.27:2991,84,0	1/1:9,21:33:81.28:3364,81,0	1/1:10,7:19:45.15:1599,45,0	1/1:23,13:39:99:3940,108,0	1/1:7,23:32:93.32:3780,93,0	1/1:7,15:22:60.21:2653,60,0	1/1:6,12:23:57.19:2185,57,0	1/1:14,25:44:99:4150,111,0	1/1:8,17:26:66.23:2670,66,0	1/1:12,25:40:99:4356,108,0	0/0:59,0:59:99:0,169,4719	1/1:17,35:57:99:5943,147,0	0/0:28,0:28:84.29:0,84,2398	1/1:3,7:11:27.09:1139,27,0	1/1:9,4:15:36.12:1269,36,0	1/1:7,18:30:72.25:2732,72,0	1/1:7,9:20:42.14:1425,42,0	1/1:8,16:28:63.22:2668,63,0	1/1:4,22:34:71.86:3070,72,0	1/1:8,9:21:24.08:807,24,0	1/1:6,24:31:84.28:3303,84,0	1/1:7,12:25:69.21:2405,69,0	1/1:11,18:33:81.28:3308,81,0	1/1:3,6:11:27.09:1139,27,0
chr10	92299802	.	C	CTTT	7039.27	PASS	AB=0.899;AC=40;AF=0.714;AN=56;BaseQRankSum=-3.453;DP=719;FS=6.867;HRun=14;HaplotypeScore=122.9140;InbreedingCoeff=0.6772;MQ=73.02;MQ0=8;MQRankSum=-2.379;QD=13.28;ReadPosRankSum=-2.111;VQSLOD=2.5654;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:35:84.74:0,85,827	0/1:7,0:7:15.47:15,0,24	0/0:63,0:25:33.44:0,33,274	0/1:79,0:34:12.91:13,0,186	1/1:15,21:42:65.37:792,65,0	0/0:23,0:23:49:0,49,424	0/0:9,0:9:17.95:0,18,159	1/1:28,0:36:55.71:759,56,0	1/1:7,9:16:29.13:436,29,0	1/1:8,7:20:29.43:333,29,0	1/1:6,7:17:27.01:340,27,0	1/1:5,7:14:12.01:151,12,0	1/1:7,14:23:24.05:353,24,0	1/1:7,8:17:18.01:260,18,0	0/1:13,0:37:31.01:56,0,31	0/0:28,0:28:53.82:0,54,490	0/0:12,0:31:7.13:0,7,90	1/1:7,8:13:15.05:262,15,0	1/1:14,8:23:31.42:438,31,0	1/1:9,12:20:39.99:624,40,0	1/1:6,5:12:9.50:148,10,0	1/1:9,7:19:27.90:366,28,0	1/1:13,10:27:21.34:293,21,0	1/1:10,10:19:21.07:366,21,0	1/1:7,6:15:21.02:276,21,0	1/1:11,9:22:36.10:544,36,0	1/1:10,11:27:14.84:213,15,0	0/1:9,0:9:0:0,0,0
chr10	92300442	.	AAAAAC	A	727.28	PASS	AB=0.990;AC=7;AF=0.125;AN=56;BaseQRankSum=5.132;DP=541;FS=29.009;HRun=0;HaplotypeScore=107.5933;InbreedingCoeff=0.1392;MQ=45.32;MQ0=53;MQRankSum=-6.557;QD=6.80;ReadPosRankSum=2.045;VQSLOD=0.6668;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:30:45.14:0,45,853	0/0:7,0:6:14.67:0,15,142	0/0:42,0:9:15.88:0,16,106	0/0:54,0:13:21.60:0,22,208	0/0:17,0:15:20.25:0,20,173	0/1:19,1:20:31.04:254,0,31	0/1:4,0:3:14.17:14,0,18	0/0:28,0:18:41.99:0,42,332	0/0:9,0:8:20.75:0,21,220	0/1:28,0:25:33.44:33,0,194	0/0:21,0:20:27.93:0,28,190	0/1:21,0:21:4.10:4,0,270	0/0:8,0:7:11.25:0,11,110	0/0:12,0:10:4.55:0,5,169	0/0:16,0:16:41.53:0,42,371	1/1:27,3:26:14.64:519,15,0	0/0:25,0:22:12.46:0,12,360	0/0:16,0:13:33.07:0,33,306	0/0:22,0:15:41.94:0,42,542	0/0:20,0:18:8.96:0,9,217	0/0:5,0:4:8.60:0,9,116	0/0:4,0:3:4.27:0,4,31	0/1:4,0:4:15.69:31,0,16	0/0:12,0:11:25.69:0,26,150	0/0:17,0:16:8.77:0,9,130	0/0:17,0:16:45.92:0,46,424	0/0:19,0:15:37.43:0,37,440	0/0:27,0:19:19.35:0,19,537
chr10	92300447	.	CAAAAA	C	1200.83	PASS	AB=0.917;AC=10;AF=0.179;AN=56;BaseQRankSum=-0.513;DP=560;FS=12.455;HRun=16;HaplotypeScore=116.3255;InbreedingCoeff=0.7153;MQ=47.03;MQ0=45;MQRankSum=-2.594;QD=15.20;ReadPosRankSum=0.065;VQSLOD=-0.5227;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:33:57.69:0,58,911	0/1:8,0:6:10.02:10,0,74	0/0:45,0:9:17.29:0,17,96	0/0:52,0:14:13.11:0,13,182	0/0:17,0:16:9.86:0,10,92	1/1:8,14:22:27.94:435,28,0	1/1:6,0:6:11.15:78,11,0	0/0:24,0:20:18.04:0,18,124	0/0:8,0:7:14.93:0,15,141	0/0:24,0:22:44.17:0,44,226	0/0:16,0:18:33.92:0,34,192	0/0:22,0:24:24.18:0,24,253	0/0:8,0:7:14.22:0,14,79	0/0:13,0:12:25.94:0,26,181	0/0:15,0:16:23.38:0,23,153	1/1:29,4:29:56.41:800,56,0	0/0:26,0:23:31.61:0,32,222	0/0:15,0:13:14.96:0,15,211	0/0:23,0:14:28.26:0,28,340	0/0:20,0:18:22.65:0,23,199	0/0:7,0:5:11.94:0,12,114	0/1:4,0:4:0.66:1,0,21	1/1:3,0:4:2.96:28,3,0	0/0:12,0:11:16.85:0,17,74	0/0:14,0:16:22.78:0,23,163	0/0:21,0:20:39.71:0,40,340	0/0:23,0:19:38.04:0,38,388	0/0:27,0:19:38.77:0,39,537
chr10	92300459	.	A	AC	288.78	PASS	AB=0.994;AC=7;AF=0.125;AN=56;BaseQRankSum=0.732;DP=556;FS=15.772;HRun=0;HaplotypeScore=100.6586;InbreedingCoeff=0.4274;MQ=47.68;MQ0=35;MQRankSum=-2.349;QD=1.95;ReadPosRankSum=-1.734;VQSLOD=1.1856;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:32:61.38:0,61,524	1/1:10,0:8:3.47:19,3,0	0/1:50,0:7:9.03:9,0,37	0/1:57,1:13:6.64:7,0,118	0/0:15,0:15:18.72:0,19,128	0/0:22,0:22:39.91:0,40,203	0/0:5,0:5:12.42:0,12,59	1/1:18,6:22:36.26:372,36,0	0/0:6,0:5:14.90:0,15,113	0/0:23,0:22:56.19:0,56,410	0/0:18,0:18:45.72:0,46,290	0/0:24,0:24:65.28:0,65,459	0/0:11,0:9:23.81:0,24,171	0/0:16,0:15:18.21:0,18,178	0/0:14,0:14:1.89:0,2,16	0/0:33,0:32:46.85:0,47,325	0/0:25,0:24:14.41:0,14,51	0/0:12,0:12:16.50:0,16,228	0/0:19,0:13:30.36:0,30,253	0/0:18,0:18:32.73:0,33,235	0/0:8,0:6:15.37:0,15,115	0/1:6,0:6:0.51:1,0,54	0/0:4,0:3:2.60:0,3,10	0/0:11,0:10:22.56:0,23,149	0/0:17,0:17:13.03:0,13,208	0/0:23,0:22:62.67:0,63,488	0/0:22,0:20:52.62:0,53,378	0/0:26,0:19:47.69:0,48,371
chr10	92300463	.	AC	A	4035.43	PASS	AB=0.966;AC=44;AF=0.786;AN=56;BaseQRankSum=-2.829;DP=534;FS=1.120;HRun=1;HaplotypeScore=80.8520;InbreedingCoeff=0.3729;MQ=46.84;MQ0=31;MQRankSum=-1.474;QD=8.99;ReadPosRankSum=0.739;VQSLOD=1.1265;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:28:62.11:62,0,129	0/0:10,0:8:6.42:0,6,58	0/1:42,4:7:9.49:23,0,9	0/0:48,4:13:16.58:0,17,99	1/1:0,16:16:22.32:145,22,0	1/1:22,0:22:10.50:149,10,0	1/1:4,0:4:5.33:37,5,0	0/1:26,0:24:9.88:62,0,10	1/1:5,0:4:11.90:85,12,0	1/1:21,0:20:15.28:154,15,0	1/1:18,0:18:25.63:217,26,0	1/1:22,1:23:18.91:229,19,0	1/1:10,1:9:0.20:99,0,0	1/1:15,1:15:18.99:183,19,0	0/1:12,2:14:2.13:2,0,101	1/1:28,3:30:23.98:333,24,0	0/0:23,0:22:29.36:0,29,145	1/1:11,0:11:19.75:104,20,0	1/1:18,0:12:27.65:221,28,0	1/1:0,19:19:32.69:228,33,0	0/1:7,0:5:2.69:77,0,3	0/1:8,0:8:0.11:62,0,0	1/1:4,0:3:2.96:19,3,0	1/1:12,0:11:22.59:128,23,0	1/1:14,1:15:24.04:186,24,0	1/1:15,9:23:68.40:520,68,0	1/1:20,3:21:53.57:397,54,0	1/1:23,1:17:41.42:315,41,0
chr10	92300476	.	AAAC	A	3097.48	PASS	AB=0.993;AC=35;AF=0.625;AN=56;BaseQRankSum=-0.138;DP=410;FS=2.446;HRun=0;HaplotypeScore=79.0300;InbreedingCoeff=-0.0502;MQ=55.84;MQ0=18;MQRankSum=-1.030;QD=9.68;ReadPosRankSum=4.704;VQSLOD=2.8339;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:62.62:0,63,765	1/1:3,6:7:5.90:88,6,0	0/0:30,0:10:25.79:0,26,262	0/0:31,0:10:17.79:0,18,172	1/1:19,0:19:15.16:179,15,0	1/1:22,0:22:1.93:228,2,0	0/0:4,0:4:1.55:0,2,4	1/1:5,21:24:63.06:767,63,0	1/1:5,0:4:8.21:53,8,0	0/1:11,0:10:5.62:101,0,6	0/1:10,0:10:23.66:49,0,24	0/1:16,0:16:24.43:128,0,24	0/1:10,0:8:20.09:102,0,20	1/1:14,0:13:2.07:113,2,0	1/1:4,8:12:11.95:176,12,0	0/1:19,2:20:9.31:229,0,9	1/1:4,13:16:14.92:225,15,0	0/1:11,0:11:4.07:77,0,4	0/1:15,0:10:7.65:89,0,8	0/1:15,0:15:6.53:81,0,7	0/1:8,0:6:40.46:40,0,47	0/1:9,0:9:18.03:78,0,18	1/1:6,0:5:8.99:77,9,0	1/1:10,0:9:0.93:5,1,0	0/1:12,0:12:9.47:68,0,9	0/1:15,0:14:5.33:61,0,5	1/1:20,0:18:20.78:201,21,0	0/1:7,0:7:40.49:44,0,40
chr10	92300477	.	AAC	A	3216.43	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=1.262;DP=388;FS=0.608;HRun=0;HaplotypeScore=70.9125;InbreedingCoeff=0.4214;MQ=57.52;MQ0=15;MQRankSum=-0.966;QD=10.48;ReadPosRankSum=3.971;VQSLOD=3.2762;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:50.96:0,51,610	1/1:7,0:6:5.89:44,6,0	0/0:29,0:11:28.59:0,29,265	0/0:27,0:9:20.84:0,21,184	1/1:20,0:20:27.53:228,28,0	1/1:22,0:22:31.44:288,31,0	1/1:3,1:4:2.36:8,2,0	1/1:24,0:24:57.65:485,58,0	1/1:5,0:4:11.97:103,12,0	1/1:12,0:11:22.83:185,23,0	1/1:8,1:9:11.53:97,12,0	1/1:15,1:16:17.37:183,17,0	0/1:10,0:8:7.98:119,0,8	1/1:14,0:13:6.58:119,7,0	1/1:11,0:12:11.90:89,12,0	1/1:21,0:20:9.69:208,10,0	1/1:13,0:13:14.95:116,15,0	1/1:10,0:10:24.13:132,24,0	1/1:14,0:10:17.66:158,18,0	1/1:11,2:13:12.95:89,13,0	0/1:7,0:6:26.05:90,0,26	0/1:9,0:9:3:90,0,3	1/1:6,0:5:8.98:73,9,0	1/1:11,0:10:2.50:9,2,0	1/1:11,0:11:18.61:113,19,0	0/1:13,0:12:0.40:92,0,0	1/1:17,0:15:22.92:189,23,0	0/1:7,0:7:3.56:66,0,4
chr10	92300478	.	AC	A	4492.36	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-0.620;DP=365;FS=12.378;HRun=2;HaplotypeScore=60.9919;InbreedingCoeff=0.6577;MQ=60.03;MQ0=13;MQRankSum=-3.379;QD=15.44;ReadPosRankSum=1.372;VQSLOD=3.3165;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:41.60:0,42,423	1/1:7,0:6:5.84:33,6,0	0/0:29,0:12:30.50:0,31,251	0/0:25,1:9:14.84:0,15,116	1/1:15,0:15:29.71:220,30,0	1/1:14,8:22:45.47:436,45,0	1/1:1,3:4:3.01:35,3,0	1/1:23,0:23:59.69:420,60,0	1/1:4,0:4:11.94:92,12,0	1/1:11,2:12:34.32:377,34,0	1/1:6,4:10:11.98:115,12,0	1/1:11,4:15:30.14:305,30,0	1/1:9,2:9:9:157,9,0	1/1:10,4:13:26.44:197,26,0	1/1:12,0:12:11.67:66,12,0	1/1:10,10:19:36.44:374,36,0	1/1:13,0:13:14.68:87,15,0	1/1:9,2:11:27.32:247,27,0	1/1:12,0:9:21:185,21,0	1/1:11,2:13:14.18:107,14,0	0/1:7,0:6:12.49:108,0,12	1/1:4,3:7:15.02:155,15,0	1/1:3,1:3:9:83,9,0	1/1:2,9:10:3.01:33,3,0	1/1:7,3:10:21.03:222,21,0	1/1:11,0:11:17.92:153,18,0	1/1:16,0:15:23.88:189,24,0	1/1:4,1:5:14.37:95,14,0
chr10	92301254	.	A	AAAG	16271.03	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-5.703;DP=481;FS=14.502;HRun=0;HaplotypeScore=74.0437;InbreedingCoeff=0.7927;MQ=64.33;MQ0=4;MQRankSum=-3.979;QD=38.56;ReadPosRankSum=1.126;VQSLOD=5.0142;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.17:0,54,817	1/1:1,4:6:12.04:254,12,0	0/0:37,0:17:15.88:0,16,336	0/1:23,0:13:3.02:3,0,162	1/1:6,12:18:35.99:669,36,0	1/1:1,9:10:24.08:508,24,0	1/1:0,12:10:17.60:380,18,0	1/1:5,27:33:96.27:1860,96,0	1/1:2,7:9:6.02:126,6,0	1/1:1,16:18:54.16:1049,54,0	1/1:3,10:13:23.82:368,24,0	1/1:7,20:28:42.14:875,42,0	1/1:2,10:12:21.07:442,21,0	1/1:4,17:22:42.14:853,42,0	1/1:2,10:12:33.11:697,33,0	1/1:6,11:17:27.09:557,27,0	1/1:3,21:26:56.22:1146,56,0	1/1:1,15:16:42.14:887,42,0	1/1:6,13:21:54.13:924,54,0	1/1:4,12:17:27.02:525,27,0	1/1:1,9:11:21.07:410,21,0	1/1:3,7:11:17.92:289,18,0	1/1:1,8:9:20.99:398,21,0	1/1:1,12:13:17.75:379,18,0	1/1:1,12:14:24.08:498,24,0	1/1:3,19:22:54.14:1027,54,0	1/1:2,14:14:39.13:794,39,0	1/1:1,9:11:18.06:353,18,0
chr10	92301922	.	C	CCCAAA	28839.45	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-7.502;DP=714;FS=1.082;HRun=0;HaplotypeScore=123.4831;InbreedingCoeff=0.7454;MQ=70.07;MQ0=0;MQRankSum=-7.013;QD=46.37;ReadPosRankSum=2.182;VQSLOD=4.6907;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,105,1978	1/1:1,8:9:24.08:692,24,0	0/1:35,0:31:13.80:14,0,571	0/0:49,0:40:13.34:0,13,543	1/1:7,21:29:57.20:1594,57,0	1/1:25,0:25:48.16:1037,48,0	1/1:22,0:22:9.03:194,9,0	1/1:29,14:45:51.13:1237,51,0	1/1:3,12:15:36.12:1039,36,0	1/1:10,9:20:24.08:610,24,0	1/1:4,12:18:30.10:711,30,0	1/1:8,26:36:72.25:2032,72,0	1/1:6,16:22:51.18:1464,51,0	1/1:1,16:17:45.15:1298,45,0	1/1:9,16:26:51.17:1424,51,0	1/1:26,0:26:48.16:1037,48,0	1/1:12,30:43:81.28:2287,81,0	1/1:6,9:15:27.09:779,27,0	1/1:11,13:26:48.05:1089,48,0	1/1:4,15:22:45.15:1248,45,0	1/1:12,14:28:39.13:1094,39,0	1/1:3,8:11:24.08:644,24,0	1/1:6,6:12:21.07:603,21,0	1/1:11,31:43:93.27:2569,93,0	1/1:4,7:12:15.05:402,15,0	1/1:9,18:29:63.22:1753,63,0	1/1:7,24:31:54.19:1556,54,0	1/1:0,5:5:15.05:433,15,0
chr10	92301942	.	A	ACCAAAC	19067.04	PASS	AB=0.998;AC=28;AF=0.500;AN=56;BaseQRankSum=13.224;DP=746;FS=3.766;HRun=0;HaplotypeScore=175.6884;InbreedingCoeff=-0.5714;MQ=75.89;MQ0=0;MQRankSum=-6.903;QD=30.22;ReadPosRankSum=10.848;VQSLOD=3.4837;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,102,2751	0/1:10,0:10:30.67:351,0,31	0/0:27,0:26:53.04:0,53,1103	0/0:43,0:36:74.40:0,74,1204	0/1:27,0:27:99:786,0,105	1/1:2,20:24:54.19:1888,54,0	1/1:10,10:22:36.12:1153,36,0	0/1:50,0:50:99:870,0,751	0/1:15,0:15:35.74:529,0,36	0/1:13,0:13:81.49:343,0,81	0/1:23,0:23:99:443,0,254	0/1:41,0:41:99:1038,0,323	0/1:25,0:25:99:746,0,200	0/1:23,0:23:99:690,0,119	0/1:28,0:29:99:683,0,346	1/1:2,26:33:51.18:1856,51,0	0/1:37,0:37:97.91:1179,0,98	0/1:18,0:18:99:474,0,168	0/1:32,0:32:99:661,0,497	0/1:25,0:25:99:600,0,245	0/1:29,0:29:99:552,0,375	0/1:12,0:12:99:299,0,123	0/1:14,0:14:99:289,0,230	0/1:45,0:45:99:1322,0,248	0/1:15,0:15:99:207,0,253	0/1:27,0:27:39.97:1031,0,40	0/1:32,0:32:99:868,0,227	0/1:10,0:10:99:208,0,128
chr10	92302380	.	A	ACATCGT	45934.98	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-10.323;DP=728;FS=2.386;HRun=0;HaplotypeScore=133.8641;InbreedingCoeff=0.9863;MQ=71.14;MQ0=0;MQRankSum=-17.468;QD=82.17;ReadPosRankSum=0.981;VQSLOD=6.2729;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,2516	0/0:13,0:13:33.11:0,33,770	0/0:21,0:21:51.04:0,51,975	0/0:20,0:21:45.09:0,45,851	1/1:5,16:25:60.21:2020,60,0	1/1:6,23:30:78.27:2735,78,0	1/1:6,8:14:39.13:1351,39,0	1/1:22,18:42:99:3599,111,0	1/1:11,19:31:69.24:2383,69,0	1/1:9,13:25:63.19:2029,63,0	1/1:4,17:21:54.19:1890,54,0	1/1:7,25:34:84.29:2899,84,0	1/1:14,21:36:84.24:2807,84,0	1/1:9,38:47:99:4420,126,0	0/0:44,0:44:99:0,132,2925	1/1:15,37:55:99:4078,120,0	0/0:33,0:33:96.31:0,96,2174	1/1:7,7:14:39.13:1373,39,0	1/1:9,10:19:45.11:1443,45,0	1/1:3,13:17:42.14:1470,42,0	1/1:6,8:16:27.09:926,27,0	1/1:1,13:17:39.13:1344,39,0	1/1:4,12:17:41.83:1445,42,0	1/1:6,5:13:18.06:632,18,0	1/1:4,9:15:30.10:1052,30,0	1/1:4,23:30:84.26:2585,84,0	1/1:13,23:38:93.32:3141,93,0	1/1:0,3:3:9.03:315,9,0
chr10	92302736	.	GA	G	6928.09	PASS	AB=0.632;AC=42;AF=0.750;AN=56;BaseQRankSum=0.990;DP=531;FS=18.816;HRun=11;HaplotypeScore=88.1698;InbreedingCoeff=0.6317;MQ=49.41;MQ0=7;MQRankSum=-4.223;QD=16.34;ReadPosRankSum=0.673;VQSLOD=4.0043;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:37:62.04:0,62,794	0/0:2,0:6:14.41:0,14,79	0/0:8,1:6:13.57:0,14,120	0/1:8,2:4:15.46:15,0,37	1/1:6,14:19:38.72:320,39,0	1/1:2,19:22:58.97:473,59,0	1/1:4,11:15:6.96:246,7,0	1/1:10,24:34:68.87:563,69,0	1/1:3,20:23:53.86:435,54,0	1/1:4,18:22:53.80:431,54,0	1/1:2,8:10:17.94:146,18,0	1/1:7,20:27:59.81:484,60,0	1/1:4,16:20:56.50:441,57,0	1/1:6,18:23:27.88:412,28,0	0/0:4,0:28:54.13:0,54,274	1/1:7,24:32:32.96:467,33,0	0/0:5,0:25:53.48:0,53,316	1/1:4,6:9:17.94:146,18,0	1/1:1,13:14:9.88:270,10,0	0/1:2,11:13:2.02:192,0,2	1/1:6,14:18:3.94:232,4,0	0/1:5,8:13:3.39:147,0,3	1/1:2,6:8:17.70:146,18,0	1/1:6,15:22:29.53:243,30,0	1/1:4,14:18:32.85:262,33,0	1/1:3,17:19:50.90:412,51,0	1/1:1,17:18:35.96:295,36,0	0/1:1,7:8:8:148,0,8
chr10	92302749	.	AAAAC	A	7123.51	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=11.109;DP=600;FS=8.229;HRun=0;HaplotypeScore=138.9467;InbreedingCoeff=0.9919;MQ=57.33;MQ0=3;MQRankSum=-14.152;QD=35.09;ReadPosRankSum=0.530;VQSLOD=4.8537;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:81.28:0,81,2045	0/0:5,0:5:12.04:0,12,304	0/0:17,0:13:36.05:0,36,764	0/0:14,0:8:21.07:0,21,421	0/0:18,0:17:48.16:0,48,1203	0/0:25,0:25:69.24:0,69,1732	0/0:18,0:18:48.16:0,48,1195	0/0:39,0:38:90.29:0,90,2164	0/0:25,0:25:54.19:0,54,1330	1/1:1,23:24:69.24:1201,69,0	1/1:1,15:16:36.08:591,36,0	1/1:3,23:26:72.23:1224,72,0	1/1:6,19:25:45.15:787,45,0	1/1:7,21:27:66.23:1137,66,0	0/0:27,0:27:69.18:0,69,1621	0/0:32,0:32:78.22:0,78,1896	0/0:29,0:27:72.21:0,72,1670	1/1:5,11:16:18.06:311,18,0	0/0:21,0:21:57.20:0,57,1375	0/0:20,0:20:57.11:0,57,1258	0/0:19,0:19:48.16:0,48,1166	1/1:0,17:17:36.12:584,36,0	1/1:0,10:10:27.09:451,27,0	1/1:5,18:23:21.01:368,21,0	1/1:6,12:18:27.09:468,27,0	0/0:25,1:26:22.55:0,23,1648	0/0:20,0:20:42.14:0,42,1017	0/0:9,0:9:24.08:0,24,582
chr10	92304032	.	GA	G	14618.92	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=6.638;DP=759;FS=7.755;HRun=9;HaplotypeScore=75.2052;InbreedingCoeff=0.9919;MQ=74.71;MQ0=0;MQRankSum=-3.512;QD=21.85;ReadPosRankSum=2.194;VQSLOD=5.7155;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,150,1711	1/1:0,9:9:20.99:192,21,0	0/0:12,0:12:26.54:0,27,262	0/0:18,0:19:32.52:0,33,397	1/1:3,19:22:56.97:508,57,0	1/1:2,15:17:42.02:384,42,0	1/1:5,27:32:78.04:714,78,0	1/1:3,35:38:99:947,105,0	1/1:2,29:31:81.04:741,81,0	1/1:5,20:25:59.51:544,60,0	1/1:3,16:19:42.02:384,42,0	1/1:4,45:49:99:1098,120,0	1/1:6,24:30:60.02:548,60,0	1/1:0,32:33:89.08:802,89,0	1/1:2,44:46:99:1016,111,0	1/1:6,43:49:79.44:981,79,0	1/1:4,31:35:55.43:762,55,0	1/1:6,16:22:42.01:384,42,0	1/1:2,16:18:48.02:439,48,0	1/1:2,17:19:42.01:384,42,0	1/1:7,35:42:93.04:851,93,0	1/1:3,18:21:51.02:467,51,0	1/1:1,9:10:27.01:247,27,0	1/1:2,27:29:75.04:686,75,0	1/1:2,15:17:36.01:330,36,0	1/1:4,23:27:69.03:632,69,0	1/1:5,19:24:48.02:439,48,0	1/1:0,5:5:15.01:137,15,0
chr10	92304231	.	G	GA	1583.75	PASS	AB=0.938;AC=21;AF=0.375;AN=56;BaseQRankSum=-0.320;DP=533;FS=5.005;HRun=2;HaplotypeScore=107.4913;InbreedingCoeff=0.5103;MQ=51.71;MQ0=12;MQRankSum=0.403;QD=7.20;ReadPosRankSum=1.830;VQSLOD=1.1031;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:48.42:0,48,481	0/0:6,0:7:7.65:0,8,39	0/1:27,0:8:1.09:1,0,185	0/0:21,0:6:11.88:0,12,128	0/0:25,0:25:16.07:0,16,55	0/0:21,0:21:32.01:0,32,171	0/0:13,0:13:6.61:0,7,31	0/0:38,0:37:3.99:0,4,120	0/0:17,0:17:12:0,12,59	1/1:14,7:21:16.66:221,17,0	1/1:10,10:20:40.39:424,40,0	1/1:17,5:21:24.08:262,24,0	1/1:24,4:28:28.94:268,29,0	1/1:14,1:13:11.37:79,11,0	0/1:16,0:16:9.23:9,0,21	0/0:21,2:23:2.41:0,2,134	0/1:16,0:14:6.48:6,0,33	0/1:11,1:10:10.47:14,0,10	0/0:24,0:24:36.91:0,37,131	0/0:29,0:29:18.81:0,19,87	0/0:8,0:8:8.54:0,9,25	1/1:7,0:7:4.12:23,4,0	0/1:9,4:12:31.82:156,0,32	1/1:4,0:4:4.25:34,4,0	1/1:13,5:18:20.89:273,21,0	0/0:24,0:23:5.02:0,5,50	0/0:33,0:33:16.34:0,16,76	0/0:10,0:10:7.65:0,8,21
chr10	92304233	.	AG	A	6940	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-2.731;DP=526;FS=20.398;HRun=1;HaplotypeScore=84.5796;InbreedingCoeff=0.6602;MQ=52.69;MQ0=11;MQRankSum=-1.667;QD=15.32;ReadPosRankSum=-3.438;VQSLOD=2.8012;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:11.63:0,12,428	0/0:7,0:7:4.62:0,5,21	0/0:25,0:8:20.51:0,21,222	0/0:20,0:6:11.14:0,11,126	1/1:2,21:23:44.70:426,45,0	1/1:21,0:21:1.86:125,2,0	1/1:12,0:12:7.40:68,7,0	1/1:36,2:37:40.01:285,40,0	1/1:2,15:17:0.56:189,1,0	1/1:23,0:23:50.72:349,51,0	1/1:19,0:19:50.17:293,50,0	1/1:21,0:20:51.09:335,51,0	1/1:26,0:26:56.25:366,56,0	1/1:15,0:14:33.18:217,33,0	1/1:15,0:15:16.31:122,16,0	1/1:21,2:23:6.08:185,6,0	0/1:15,0:13:12.64:90,0,13	1/1:11,1:10:17.76:116,18,0	1/1:14,10:24:54.26:671,54,0	1/1:2,27:29:47.10:584,47,0	1/1:5,3:8:20.55:174,21,0	1/1:7,0:7:15.66:101,16,0	1/1:12,2:13:24.99:155,25,0	1/1:5,0:5:8:51,8,0	1/1:18,0:18:34.07:212,34,0	1/1:3,22:24:72.03:845,72,0	1/1:23,10:33:83.82:754,84,0	1/1:4,6:10:20.93:225,21,0
chr10	92305831	.	C	CA	4986.17	PASS	AB=0.881;AC=24;AF=0.429;AN=56;BaseQRankSum=-10.824;DP=611;FS=15.901;HRun=11;HaplotypeScore=59.9504;InbreedingCoeff=0.8232;MQ=73.01;MQ0=0;MQRankSum=-0.664;QD=17.19;ReadPosRankSum=0.069;VQSLOD=4.0702;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:47.44:0,47,367	1/1:2,6:9:17.87:167,18,0	0/0:16,0:15:1.55:0,2,92	0/0:6,0:6:11.81:0,12,78	1/1:7,14:21:19.16:373,19,0	0/0:23,2:25:26.33:0,26,387	0/0:19,0:19:23.39:0,23,361	0/0:31,0:31:71.68:0,72,556	1/1:3,26:29:19.66:563,20,0	0/1:20,2:22:15.49:15,0,217	0/0:22,0:22:52.75:0,53,416	0/0:29,0:31:75.70:0,76,566	0/0:19,0:22:54.86:0,55,406	0/0:18,0:18:47.80:0,48,369	1/1:3,25:28:63.13:639,63,0	0/0:31,0:31:64.86:0,65,509	1/1:0,21:21:51.10:518,51,0	0/0:18,0:17:53.79:0,54,418	1/1:8,13:21:2.05:361,2,0	1/1:4,24:28:69.06:679,69,0	1/1:4,16:22:24.53:401,25,0	0/0:17,0:17:29.80:0,30,232	0/0:27,0:27:70.24:0,70,536	0/1:9,2:11:0.55:1,0,179	0/0:16,0:16:35.85:0,36,279	1/1:4,18:22:48.04:465,48,0	1/1:12,21:33:42.08:426,42,0	1/1:10,13:23:38.91:380,39,0
chr10	92307478	.	A	AT	1172.66	PASS	AB=0.960;AC=8;AF=0.143;AN=56;BaseQRankSum=-4.358;DP=679;FS=0.000;HRun=10;HaplotypeScore=76.8042;InbreedingCoeff=0.6905;MQ=72.40;MQ0=0;MQRankSum=-2.949;QD=11.50;ReadPosRankSum=0.095;VQSLOD=3.0720;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:49:99:0,129,1025	1/1:2,9:12:20.89:206,21,0	0/0:15,0:15:31.63:0,32,223	0/1:17,0:17:21.91:22,0,113	0/0:24,0:24:59.88:0,60,490	0/0:27,0:27:68.88:0,69,563	0/0:17,0:17:40.96:0,41,321	0/0:42,0:43:86.79:0,87,713	0/0:22,0:22:59.91:0,60,489	0/0:29,0:29:80.89:0,81,664	0/0:21,0:21:56.92:0,57,468	0/0:26,0:27:73.95:0,74,597	0/0:24,0:24:61.49:0,61,496	0/0:19,1:20:18.94:0,19,360	1/1:3,21:25:29.48:513,29,0	0/0:31,0:31:86.83:0,87,704	1/1:4,21:25:54.14:576,54,0	0/0:25,0:25:68.92:0,69,566	0/0:16,0:16:35.93:0,36,291	0/0:27,2:30:44.91:0,45,559	0/1:19,2:23:6.01:6,0,341	0/0:30,0:31:67.92:0,68,548	0/0:18,0:18:44.93:0,45,369	0/0:23,1:24:30.92:0,31,457	0/0:12,1:14:2.99:0,3,217	0/0:31,1:32:57.91:0,58,682	0/0:23,0:23:56.88:0,57,461	0/0:14,0:14:35.94:0,36,296
chr10	92308998	.	AT	A	1731.62	PASS	AB=0.846;AC=20;AF=0.357;AN=56;BaseQRankSum=-2.790;DP=593;FS=10.099;HRun=14;HaplotypeScore=74.2541;InbreedingCoeff=0.5417;MQ=69.03;MQ0=7;MQRankSum=0.268;QD=5.25;ReadPosRankSum=2.779;VQSLOD=1.6992;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,2:28:31.62:0,32,552	0/0:10,0:10:24.49:0,24,222	0/1:55,1:22:0.75:1,0,141	0/1:49,0:22:5.03:5,0,61	0/1:9,15:25:2.82:261,0,3	0/1:12,5:17:65.79:66,0,184	0/0:8,0:9:20.45:0,20,162	0/0:16,1:30:23.23:0,23,219	1/1:3,6:9:17.81:123,18,0	0/0:8,0:22:54.64:0,55,320	0/0:6,0:18:37.29:0,37,213	0/0:5,0:20:31.32:0,31,159	0/0:3,0:5:11.48:0,11,62	0/0:4,0:16:19.84:0,20,100	0/0:20,1:22:25.55:0,26,358	0/1:10,1:11:17.71:18,0,112	0/1:33,10:43:99:116,0,511	0/0:11,0:26:43.64:0,44,268	1/1:8,15:24:24.43:292,24,0	1/1:4,12:16:4.83:177,5,0	1/1:5,7:14:21.65:135,22,0	0/0:2,0:12:22.73:0,23,115	0/0:8,0:14:10.97:0,11,141	0/0:2,0:10:19.89:0,20,101	0/0:6,0:20:37.92:0,38,228	1/1:10,9:21:2.67:186,3,0	1/1:9,14:23:41.32:283,41,0	1/1:8,12:20:16.73:259,17,0
chr10	92310128	.	TCG	T	4112.52	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.540;DP=840;FS=6.887;HRun=0;HaplotypeScore=96.7576;InbreedingCoeff=0.9999;MQ=89.20;MQ0=0;MQRankSum=-6.886;QD=42.84;ReadPosRankSum=1.468;VQSLOD=5.0616;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,2641	1/1:0,13:13:36.12:587,36,0	0/0:33,0:33:99:0,99,1946	0/0:27,0:28:81.23:0,81,1574	0/0:31,0:31:93.32:0,93,1888	0/0:34,0:34:99:0,102,2016	0/0:35,0:35:99:0,105,2092	0/0:32,0:32:96.31:0,96,1861	0/0:35,0:35:99:0,105,2050	0/0:31,0:30:93.31:0,93,1848	0/0:23,0:23:69.23:0,69,1353	0/0:30,0:30:87.30:0,87,1764	0/0:27,0:27:81.28:0,81,1639	0/0:25,0:25:75.24:0,75,1486	1/1:0,43:43:99:1812,111,0	0/0:34,0:34:99:0,102,2034	1/1:0,40:40:99:1713,105,0	0/0:18,0:18:51.17:0,51,1036	0/0:23,0:23:66.21:0,66,1255	0/0:24,0:24:72.23:0,72,1424	0/0:54,0:54:99:0,163,3175	0/0:33,0:33:99:0,99,1974	0/0:17,0:17:51.18:0,51,1028	0/0:26,0:26:78.27:0,78,1573	0/0:25,0:25:75.26:0,75,1522	0/0:36,0:36:99:0,108,2091	0/0:31,0:31:93.32:0,93,1853	0/0:15,0:15:45.15:0,45,913
chr10	92311651	.	CG	C	10897.44	PASS	AB=0.692;AC=16;AF=0.286;AN=56;BaseQRankSum=23.545;DP=1075;FS=7.562;HRun=1;HaplotypeScore=159.2220;InbreedingCoeff=-0.4021;MQ=68.20;MQ0=0;MQRankSum=-7.062;QD=13.39;ReadPosRankSum=1.960;VQSLOD=3.9632;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:37,47:84:99:1292,0,1502	0/0:4,0:4:12.04:0,12,192	0/0:15,0:15:42.12:0,42,597	0/0:15,0:15:42.14:0,42,649	0/1:13,12:25:99:234,0,552	0/0:17,0:17:51.17:0,51,805	0/0:30,0:30:90.25:0,90,1350	0/1:31,25:56:99:847,0,1142	0/0:32,0:32:93.29:0,93,1432	0/0:34,0:33:96.30:0,96,1469	0/0:9,0:9:27.09:0,27,431	0/1:45,26:71:99:876,0,1907	0/1:28,20:48:99:697,0,1091	0/1:29,31:60:99:1079,0,1165	0/0:22,0:22:66.23:0,66,1054	0/0:23,0:23:69.24:0,69,1094	0/0:43,1:44:87.53:0,88,1931	0/1:40,31:71:99:931,0,1665	0/1:25,22:47:99:751,0,1006	0/1:13,11:24:99:314,0,488	0/1:74,42:115:99:870,0,3182	0/1:13,12:25:99:314,0,464	0/1:10,9:19:99:242,0,419	0/1:39,41:80:99:1284,0,1613	0/0:16,0:16:48.14:0,48,742	0/1:24,19:43:99:670,0,916	0/1:19,8:25:99:254,0,808	0/1:10,8:18:99:242,0,428
chr10	92311798	.	CCGCAGCAAGCAGGAGCT	C	14348.79	PASS	AB=0.763;AC=16;AF=0.286;AN=56;BaseQRankSum=16.487;DP=790;FS=2.738;HRun=0;HaplotypeScore=376.5203;InbreedingCoeff=-0.4001;MQ=67.41;MQ0=0;MQRankSum=-16.039;QD=26.57;ReadPosRankSum=3.329;VQSLOD=2.5924;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,20:55:99:1357,0,7493	0/0:9,0:9:24.08:0,24,1985	0/0:15,0:15:45.15:0,45,2836	0/0:22,0:21:54.19:0,54,4053	0/1:9,7:16:99:123,0,2047	0/0:13,0:13:39.13:0,39,3108	0/0:37,0:37:99:0,111,8426	0/1:26,11:37:99:1442,0,4557	0/0:32,0:32:96.26:0,96,7770	0/0:29,0:29:87.30:0,87,6974	0/0:14,0:14:39.08:0,39,2993	0/1:33,8:41:99:803,0,7043	0/1:19,17:36:99:1598,0,3740	0/1:22,15:37:99:2151,0,4599	0/0:18,0:18:54.19:0,54,4419	0/0:20,0:20:60.21:0,60,5000	0/0:27,0:27:81.23:0,81,6128	0/1:45,13:58:99:1671,0,9965	0/1:18,7:25:99:851,0,3228	0/1:8,4:12:99:385,0,1635	0/1:69,12:81:99:359,0,15637	0/1:3,6:8:99:442,0,609	0/1:8,6:14:99:126,0,2001	0/1:32,8:40:99:806,0,7252	0/0:14,0:14:42.14:0,42,3521	0/1:23,16:39:99:1735,0,4215	0/1:26,4:30:99:373,0,5621	0/1:8,2:9:99:126,0,1940
chr10	92312178	.	T	TC	1424.15	PASS	AB=0.779;AC=7;AF=0.125;AN=56;BaseQRankSum=9.750;DP=768;FS=40.402;HRun=0;HaplotypeScore=114.6211;InbreedingCoeff=-0.1480;MQ=61.30;MQ0=0;MQRankSum=-1.887;QD=6.33;ReadPosRankSum=1.166;VQSLOD=1.7507;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,141,1524	0/0:7,0:7:21.06:0,21,277	0/0:9,0:9:24.08:0,24,335	0/0:18,0:15:42.13:0,42,564	0/1:12,8:20:99:163,0,258	0/0:17,0:17:51.16:0,51,697	0/0:27,0:27:78.23:0,78,1053	0/1:40,5:44:61.53:62,0,1396	0/0:19,0:19:57.19:0,57,797	0/0:23,0:23:54.15:0,54,709	0/0:18,0:18:45.07:0,45,558	0/1:23,13:36:99:347,0,829	0/1:16,17:33:99:443,0,542	0/1:31,9:40:99:241,0,1025	0/0:29,0:29:87.28:0,87,1200	0/0:11,0:11:33.11:0,33,461	0/0:29,0:29:87.29:0,87,1215	0/0:39,0:39:99:0,117,1427	0/0:38,0:38:83.38:0,83,1034	0/0:21,0:21:59.93:0,60,628	0/0:69,0:69:99:0,136,1771	0/1:16,4:20:59.14:59,0,520	0/0:17,2:19:5.86:0,6,514	0/1:23,8:31:99:241,0,734	0/0:19,0:19:51.16:0,51,690	0/0:34,0:34:86.25:0,86,975	0/0:27,0:26:78.06:0,78,867	0/0:17,0:17:47.57:0,48,501
chr10	92312837	.	GCA	G	16088.32	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=3.104;DP=798;FS=3.661;HRun=0;HaplotypeScore=143.3512;InbreedingCoeff=0.9813;MQ=69.61;MQ0=13;MQRankSum=2.154;QD=25.54;ReadPosRankSum=4.551;VQSLOD=5.5517;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:96.33:0,96,1543	1/1:3,0:9:11.36:56,11,0	0/0:61,0:29:26.50:0,26,658	0/0:65,0:37:41.11:0,41,755	1/1:5,18:24:54.17:665,54,0	1/1:2,19:21:57.18:702,57,0	1/1:9,17:27:54:633,54,0	1/1:10,18:28:54.17:663,54,0	1/1:1,20:20:57.18:702,57,0	1/1:7,15:21:48.13:574,48,0	1/1:2,15:18:44.97:531,45,0	1/1:5,34:42:92.95:1099,93,0	1/1:2,31:33:87.27:1071,87,0	1/1:4,21:24:54.17:665,54,0	1/1:5,0:25:36.93:182,37,0	1/1:4,5:9:15.05:185,15,0	1/1:4,0:29:42.61:210,43,0	1/1:4,26:30:61.94:840,62,0	1/1:6,16:22:47.39:562,47,0	1/1:6,17:23:48.15:591,48,0	1/1:9,40:49:99:1402,114,0	1/1:3,19:22:54.17:665,54,0	1/1:2,15:18:32.93:383,33,0	1/1:6,24:30:49.22:793,49,0	1/1:5,20:24:45.14:554,45,0	1/1:7,30:38:95.49:1130,95,0	1/1:5,19:25:63.03:752,63,0	1/1:2,13:15:39.12:480,39,0
chr10	92313434	.	T	TC	10039.23	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-11.943;DP=807;FS=3.614;HRun=4;HaplotypeScore=78.2169;InbreedingCoeff=0.9997;MQ=92.45;MQ0=0;MQRankSum=-1.938;QD=36.24;ReadPosRankSum=3.744;VQSLOD=5.0438;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1204	0/0:13,0:13:39.10:0,39,433	0/0:31,0:31:75.12:0,75,804	0/0:35,0:35:93.21:0,93,1020	0/0:31,0:31:90.02:0,90,961	0/0:22,0:22:63.18:0,63,715	0/0:32,0:32:93.25:0,93,1044	0/0:39,0:39:99:0,102,1150	0/0:27,0:27:78.22:0,78,885	1/1:4,29:33:87.28:1174,87,0	1/1:0,19:19:54.18:736,54,0	1/1:2,38:40:99:1476,108,0	1/1:2,28:30:81.27:1107,81,0	1/1:3,23:26:60.20:821,60,0	0/0:39,0:39:99:0,117,1309	0/0:41,0:41:99:0,120,1361	0/0:36,0:36:99:0,102,1137	1/1:5,21:26:75.17:969,75,0	0/0:25,0:25:72.15:0,72,774	0/0:22,0:22:57.15:0,57,637	0/0:43,0:43:99:0,129,1446	1/1:0,22:22:57.11:779,57,0	1/1:3,18:21:60.20:820,60,0	1/1:5,29:34:96.31:1295,96,0	1/1:2,24:26:63.21:862,63,0	0/0:27,0:27:78.20:0,78,868	0/0:19,0:19:57.16:0,57,646	0/0:11,0:11:24.07:0,24,272
chr10	92313533	.	AC	A	9373.73	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.195;DP=722;FS=0.000;HRun=1;HaplotypeScore=117.0202;InbreedingCoeff=0.9996;MQ=83.15;MQ0=0;MQRankSum=-2.667;QD=39.39;ReadPosRankSum=3.065;VQSLOD=4.5726;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,175,2777	0/0:10,0:10:30.10:0,30,478	0/0:21,0:21:60.20:0,60,932	0/0:19,0:19:42.03:0,42,667	0/0:19,0:19:57.18:0,57,887	0/0:14,0:14:42.14:0,42,671	0/0:28,0:28:84.29:0,84,1338	0/0:31,0:31:93.31:0,93,1463	0/0:23,0:23:66.19:0,66,1003	1/1:0,26:26:78.26:1087,78,0	1/1:0,16:16:39.09:523,39,0	1/1:4,23:27:81.26:1108,81,0	1/1:0,24:24:66.22:923,66,0	1/1:0,18:18:54.18:755,54,0	0/0:25,0:25:75.24:0,75,1169	0/0:36,0:36:99:0,108,1727	0/0:24,0:24:72.25:0,72,1141	1/1:0,24:24:69.23:964,69,0	0/0:31,0:31:90.30:0,90,1408	0/0:17,0:17:51.16:0,51,792	0/0:64,0:64:99:0,193,3030	1/1:0,27:27:81.27:1133,81,0	1/1:0,20:20:51.17:713,51,0	1/1:0,36:36:99:1385,99,0	1/1:2,18:20:57.18:781,57,0	0/0:29,1:30:48.32:0,48,1323	0/0:26,0:26:78.27:0,78,1243	0/0:8,0:8:24.08:0,24,384
chr10	92314328	.	CTGTGTGTGTG	C	1187.22	PASS	AB=0.889;AC=15;AF=0.313;AN=48;BaseQRankSum=3.704;DP=602;FS=17.558;HRun=0;HaplotypeScore=166.6747;InbreedingCoeff=0.3838;MQ=59.95;MQ0=23;MQRankSum=-4.318;QD=5.79;ReadPosRankSum=-0.244;VQSLOD=1.3895;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:38:8.37:0,8,299	0/0:6,0:6:6.02:0,6,253	./.	0/0:31,0:22:0.47:0,0,1	0/0:11,0:10:3:0,3,25	1/1:13,0:18:9.03:209,9,0	0/0:25,0:24:3.01:0,3,37	0/0:27,0:24:0:0,0,0	0/0:18,0:17:12:0,12,150	1/1:22,0:22:3.01:57,3,0	./.	0/0:27,0:26:0.43:0,0,1	0/1:9,0:10:37.21:64,0,37	1/1:18,5:22:12.04:354,12,0	0/0:20,0:20:14.68:0,15,647	1/1:18,0:23:9.50:210,10,0	0/0:19,0:24:20.60:0,21,640	./.	0/0:30,0:30:12.51:0,13,209	0/0:10,0:10:3.01:0,3,51	0/1:47,0:42:4.86:5,0,262	./.	1/1:11,3:14:3.01:89,3,0	0/1:19,9:27:77.44:254,0,77	1/1:14,4:17:3.01:89,3,0	0/0:19,0:19:13.40:0,13,285	0/0:12,0:12:6.02:0,6,124	0/0:16,0:15:6:0,6,102
chr10	92314488	.	A	AGTGTACCAGGGTGTGGGTGGTCCA	36912.65	PASS	AB=0.776;AC=54;AF=0.964;AN=56;BaseQRankSum=-0.595;DP=294;FS=11.825;HRun=0;HaplotypeScore=264.4404;InbreedingCoeff=-0.0597;MQ=84.04;MQ0=2;MQRankSum=-4.621;QD=125.55;ReadPosRankSum=3.155;VQSLOD=3.3430;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:18.04:790,18,0	1/1:2,0:1:3.01:206,3,0	0/1:7,0:7:20.88:676,0,21	0/1:14,1:8:99:1125,0,118	1/1:11,0:11:8.18:364,8,0	1/1:6,0:5:9.03:545,9,0	1/1:16,0:13:30.06:1982,30,0	1/1:6,0:6:15.02:518,15,0	1/1:17,0:17:48.16:2732,48,0	1/1:17,0:16:45.15:3114,45,0	1/1:5,0:4:6.02:589,6,0	1/1:18,0:16:45.15:3107,45,0	1/1:10,0:10:30.09:1479,30,0	1/1:12,0:11:33.11:2420,33,0	1/1:11,0:9:21.07:1176,21,0	1/1:13,0:13:33.58:2326,34,0	1/1:8,0:8:11.95:410,12,0	1/1:6,0:6:18.06:1123,18,0	1/1:7,0:7:21.07:1280,21,0	1/1:4,0:4:9.03:340,9,0	1/1:15,0:14:24.05:695,24,0	1/1:10,0:9:18.02:1259,18,0	1/1:8,0:7:12.03:602,12,0	1/1:11,0:10:21.01:1079,21,0	1/1:11,0:10:30.10:1612,30,0	1/1:17,0:16:45.14:3205,45,0	1/1:8,0:8:17.82:1355,18,0	1/1:5,0:5:15:805,15,0
chr10	92314603	.	ACACACACACACACACACACG	A	918.49	PASS	AB=0.993;AC=11;AF=0.204;AN=54;BaseQRankSum=-2.858;DP=484;FS=1.471;HRun=0;HaplotypeScore=189.2503;InbreedingCoeff=0.0229;MQ=38.42;MQ0=29;MQRankSum=2.127;QD=5.93;ReadPosRankSum=1.136;VQSLOD=2.5232;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:63.13:0,63,3729	0/0:5,0:4:3.01:0,3,119	0/0:23,0:8:15:0,15,133	0/0:43,0:15:22.88:0,23,293	0/0:8,0:8:0:0,0,0	0/0:20,0:13:9.83:0,10,138	0/0:26,0:24:21.43:0,21,297	0/0:20,0:18:39.78:0,40,408	0/0:12,0:8:5.96:0,6,45	0/1:18,0:17:86.54:252,0,87	./.	0/1:19,1:17:99:248,0,326	0/1:20,0:15:31:31,0,301	0/1:18,0:16:99:150,0,371	0/0:21,0:17:5.95:0,6,85	0/0:14,0:13:4.78:0,5,48	0/0:18,0:12:14.91:0,15,208	0/1:13,0:12:99:190,0,471	0/0:9,0:7:16.82:0,17,187	0/0:6,0:6:2.97:0,3,20	0/0:35,0:33:26.43:0,26,240	0/1:13,0:12:50.64:59,0,51	1/1:10,0:10:3:25,3,0	0/1:31,0:27:83.27:83,0,140	1/1:12,0:11:2.96:19,3,0	0/0:10,0:10:21.01:0,21,279	0/0:8,0:8:14.91:0,15,148	0/0:5,0:5:11.88:0,12,155
chr10	92314607	.	ACACACACACACACACG	A	706.15	PASS	AB=1.000;AC=20;AF=0.370;AN=54;BaseQRankSum=0.765;DP=475;FS=1.480;HRun=0;HaplotypeScore=160.2248;InbreedingCoeff=0.2446;MQ=37.50;MQ0=32;MQRankSum=0.978;QD=3.21;ReadPosRankSum=-0.788;VQSLOD=2.3490;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:60.16:0,60,2919	0/0:5,0:4:3.01:0,3,66	0/0:21,0:7:14.68:0,15,131	0/0:43,0:15:22.01:0,22,217	0/1:8,0:8:0:0,0,0	0/0:20,0:13:9.42:0,9,85	0/0:28,0:23:11.90:0,12,96	0/0:17,0:15:28.46:0,28,230	1/1:10,0:6:3:25,3,0	0/1:17,0:16:5.12:5,0,112	./.	0/1:25,0:21:99:157,0,207	0/1:19,0:13:33.25:33,0,151	0/1:18,0:16:25.44:25,0,290	0/0:20,0:16:2.94:0,3,18	0/0:13,0:12:4.77:0,5,47	0/0:16,0:10:12.36:0,12,86	0/1:14,0:13:30.84:31,0,336	1/1:10,0:6:4.99:50,5,0	0/0:2,4:6:2.97:0,3,20	1/1:36,0:33:10.83:270,11,0	0/0:12,0:11:5.05:0,5,94	0/1:10,0:10:0:0,0,0	0/1:32,0:28:27.53:28,0,93	0/0:12,0:11:2.99:0,3,24	1/1:9,0:9:10.81:112,11,0	1/1:7,0:7:11.71:104,12,0	1/1:5,0:5:2.65:23,3,0
chr10	92314621	.	ACG	A	2157.10	PASS	AB=1.000;AC=44;AF=0.917;AN=48;BaseQRankSum=3.965;DP=440;FS=9.975;HRun=0;HaplotypeScore=89.9816;InbreedingCoeff=0.2757;MQ=37.93;MQ0=42;MQRankSum=0.562;QD=5.50;ReadPosRankSum=-3.198;VQSLOD=1.0830;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:32:24.41:24,0,368	1/1:3,0:2:5.99:50,6,0	0/0:25,0:4:10.58:0,11,55	0/1:31,0:8:3.83:4,0,33	./.	1/1:18,0:12:2.73:25,3,0	1/1:27,0:16:11.89:99,12,0	1/1:12,0:7:17.72:113,18,0	1/1:14,0:9:8.91:63,9,0	1/1:13,0:12:23.84:191,24,0	./.	1/1:23,0:19:26.54:186,27,0	1/1:20,1:13:20.70:149,21,0	1/1:16,0:15:26.79:200,27,0	1/1:15,0:11:2.94:18,3,0	1/1:15,0:11:5.96:45,6,0	1/1:11,0:6:5.93:40,6,0	1/1:15,0:13:30.62:201,31,0	1/1:5,6:6:13.93:91,14,0	./.	1/1:34,0:31:32.74:265,33,0	1/1:13,0:12:5.83:38,6,0	./.	1/1:33,0:29:23.15:168,23,0	1/1:12,0:11:3:26,3,0	1/1:2,9:8:17.92:142,18,0	1/1:6,0:5:8.93:64,9,0	1/1:5,0:5:8.97:70,9,0
chr10	92314679	.	CACAT	C	271.08	PASS	AB=0.945;AC=11;AF=0.196;AN=56;BaseQRankSum=4.498;DP=582;FS=0.722;HRun=0;HaplotypeScore=129.7084;InbreedingCoeff=0.0715;MQ=37.85;MQ0=78;MQRankSum=-2.888;QD=1.49;ReadPosRankSum=-2.809;VQSLOD=1.9476;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:65.89:0,66,1159	1/1:6,0:5:0.96:16,1,0	0/0:42,0:4:11.80:0,12,151	0/0:40,0:4:0.18:0,0,37	0/0:7,0:7:12.01:0,12,210	0/1:15,4:12:0.41:115,0,0	0/1:30,5:14:56.03:66,0,56	0/0:27,0:23:2.14:0,2,420	0/0:23,0:22:14.87:0,15,719	0/0:15,0:11:31.45:0,31,376	0/0:8,0:8:3.01:0,3,56	0/0:37,0:31:14.25:0,14,673	0/0:23,0:17:7.60:0,8,333	0/1:25,0:21:7.71:8,0,415	0/1:15,0:10:3.83:4,0,82	0/1:19,2:14:10.28:62,0,10	1/1:13,0:6:1.38:22,1,0	0/1:16,0:16:79.31:79,0,243	0/0:12,0:8:24.04:0,24,534	0/0:5,0:4:9.03:0,9,172	0/0:59,0:51:51.39:0,51,1300	0/0:16,0:11:9.77:0,10,77	0/0:9,0:8:6.02:0,6,113	0/1:32,0:29:30.82:31,0,295	0/0:17,0:16:30:0,30,358	0/0:17,0:15:16.15:0,16,739	0/0:5,0:5:14.94:0,15,326	0/0:5,0:5:15.05:0,15,368
chr10	92314681	.	CAT	C	205	PASS	AB=0.978;AC=14;AF=0.250;AN=56;BaseQRankSum=3.868;DP=590;FS=6.789;HRun=0;HaplotypeScore=122.7776;InbreedingCoeff=0.0383;MQ=37.79;MQ0=77;MQRankSum=-1.571;QD=0.75;ReadPosRankSum=-3.265;VQSLOD=0.6643;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:50.76:0,51,783	1/1:6,0:5:5.92:39,6,0	0/0:44,0:4:11.67:0,12,98	0/1:41,1:4:0.68:1,0,37	0/0:7,0:7:12.01:0,12,164	0/1:20,0:13:8.41:35,0,8	0/1:38,0:16:32.57:44,0,33	0/1:26,0:23:19.40:19,0,358	0/0:23,0:22:14.98:0,15,509	0/0:15,0:11:14.80:0,15,247	0/0:8,0:8:3.01:0,3,31	0/0:40,0:33:1.44:0,1,361	0/1:22,0:17:1.01:1,0,208	0/1:25,0:21:1.14:1,0,227	0/1:14,1:10:1.63:41,0,2	0/1:20,1:14:15.82:40,0,16	1/1:13,0:6:1.80:23,2,0	0/1:15,1:16:70.70:71,0,142	0/0:12,0:8:23.95:0,24,353	0/0:6,0:5:9.03:0,9,129	0/0:56,2:50:52.30:0,52,912	0/0:16,0:11:10.71:0,11,80	0/0:9,0:8:6.01:0,6,63	0/1:29,1:27:29.31:29,0,173	0/0:17,0:16:29.96:0,30,271	0/0:17,0:15:16.07:0,16,504	0/0:5,0:5:14.94:0,15,229	0/0:5,0:5:15.05:0,15,275
chr10	92314683	.	T	TACAC	2677.92	PASS	AB=0.909;AC=26;AF=0.464;AN=56;BaseQRankSum=-0.767;DP=606;FS=32.380;HRun=0;HaplotypeScore=135.4822;InbreedingCoeff=0.5352;MQ=37.84;MQ0=73;MQRankSum=3.701;QD=8.81;ReadPosRankSum=-1.941;VQSLOD=1.3673;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:49.05:0,49,752	1/1:6,0:5:2.06:9,2,0	0/0:50,0:5:5.38:0,5,49	0/0:43,0:4:6.01:0,6,69	0/0:7,0:7:6.02:0,6,96	0/0:17,0:14:14.29:0,14,134	0/1:35,0:16:64.91:66,0,65	1/1:28,0:26:12.38:58,12,0	0/0:23,0:22:12.12:0,12,428	1/1:8,7:13:17.55:348,18,0	1/1:7,1:8:3.01:74,3,0	1/1:27,11:33:25.01:601,25,0	1/1:18,4:18:20.67:307,21,0	1/1:16,8:21:10.40:460,10,0	0/0:14,0:10:6.26:0,6,151	0/0:19,0:15:6.46:0,6,57	1/1:12,0:6:1.77:4,2,0	0/1:12,5:17:3.95:336,0,4	0/0:12,0:8:21.07:0,21,318	0/0:5,0:4:9.03:0,9,120	0/0:58,0:51:31.73:0,32,595	1/1:16,1:12:5.49:73,5,0	1/1:5,5:10:6.02:147,6,0	0/1:27,5:29:1.82:276,0,2	1/1:16,0:15:6:91,6,0	0/1:17,0:15:13.87:14,0,447	0/0:5,0:5:12.04:0,12,197	0/0:6,0:6:8.95:0,9,233
chr10	92314739	.	TAC	T	478.74	PASS	AB=0.913;AC=7;AF=0.135;AN=52;BaseQRankSum=1.197;DP=586;FS=7.454;HRun=0;HaplotypeScore=116.2615;InbreedingCoeff=0.3676;MQ=35.86;MQ0=81;MQRankSum=-1.239;QD=4.43;ReadPosRankSum=-0.844;VQSLOD=2.2830;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,1:35:7.10:0,7,443	0/0:5,0:11:3:0,3,26	0/0:31,0:3:3.01:0,3,46	0/0:41,0:4:6.02:0,6,83	./.	0/1:17,5:20:25.47:142,0,25	1/1:26,6:27:16.02:230,16,0	0/0:26,0:11:13.29:0,13,180	0/1:12,0:8:0.08:0,0,0	0/0:24,0:21:36.11:0,36,500	0/0:15,0:14:6.01:0,6,71	0/0:42,0:33:30.09:0,30,421	0/0:19,0:15:18.06:0,18,246	0/0:25,1:23:21.07:0,21,295	0/0:21,0:18:22.56:0,23,190	1/1:8,6:19:18.05:203,18,0	0/0:18,0:15:21.47:0,21,196	0/1:16,1:15:30.68:31,0,263	0/0:8,0:6:2.03:0,2,5	./.	0/0:24,0:19:5.34:0,5,62	0/0:19,0:16:18.06:0,18,275	0/0:23,0:22:18.03:0,18,229	0/0:38,0:32:17.68:0,18,247	0/0:19,0:18:27.04:0,27,350	0/0:11,0:9:6.01:0,6,64	0/0:4,0:4:2.84:0,3,14	0/0:6,0:6:3.01:0,3,30
chr10	92314794	.	CA	C	2082.78	PASS	AB=0.664;AC=12;AF=0.250;AN=48;BaseQRankSum=-1.889;DP=444;FS=5.174;HRun=1;HaplotypeScore=73.6201;InbreedingCoeff=-0.1254;MQ=37.06;MQ0=63;MQRankSum=1.649;QD=12.25;ReadPosRankSum=2.925;VQSLOD=2.3864;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:75.85:0,76,1110	0/0:8,0:7:9.03:0,9,135	0/0:34,0:3:5.55:0,6,95	0/0:40,0:7:16.54:0,17,153	./.	0/0:9,0:6:3.01:0,3,38	0/0:23,0:10:3.01:0,3,38	0/0:15,0:11:27.80:0,28,354	0/0:11,0:5:3.01:0,3,48	0/1:3,10:11:9.81:294,0,10	./.	0/1:5,21:22:44.85:294,0,45	0/1:7,13:15:40.13:111,0,40	0/1:5,10:10:19.17:191,0,19	0/0:37,0:19:17.31:0,17,206	0/0:18,0:14:4.07:0,4,13	0/0:27,0:19:17.79:0,18,212	0/1:7,9:12:99:105,0,124	0/0:9,0:3:7.27:0,7,96	./.	0/1:8,0:4:0:0,0,0	0/1:3,8:8:29.77:114,0,30	0/1:1,11:12:13.36:346,0,13	0/1:8,24:28:21.75:457,0,22	1/1:1,9:9:21.07:294,21,0	0/1:7,0:4:14.79:15,0,120	0/0:3,0:3:3.01:0,3,39	./.
chr10	92314812	.	T	TACAC	443.25	PASS	AB=0.875;AC=11;AF=0.275;AN=40;BaseQRankSum=-1.128;DP=469;FS=8.111;HRun=0;HaplotypeScore=82.1667;InbreedingCoeff=0.2722;MQ=35.95;MQ0=83;MQRankSum=-2.650;QD=3.36;ReadPosRankSum=-0.849;VQSLOD=0.8541;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:52.59:0,53,673	1/1:7,0:6:6.02:128,6,0	0/0:56,0:8:14.34:0,14,94	0/0:54,0:12:17.27:0,17,149	./.	./.	./.	1/1:14,0:4:2.98:21,3,0	0/0:8,0:5:2.72:0,3,37	0/0:25,0:18:42.09:0,42,597	./.	0/0:24,0:21:27.09:0,27,430	0/1:19,0:14:68.15:68,0,87	0/0:13,0:10:12.02:0,12,172	0/1:23,14:20:5.25:227,0,5	0/0:11,0:9:6:0,6,54	0/1:12,12:16:14.36:68,0,14	0/1:14,0:11:1.93:2,0,213	1/1:9,0:3:7.20:45,7,0	./.	./.	0/0:9,0:7:9.03:0,9,130	0/0:12,0:12:21.07:0,21,349	0/0:27,0:24:36.05:0,36,537	0/0:11,0:11:27.08:0,27,421	0/1:6,0:3:12.97:13,0,60	./.	./.
chr10	92314830	.	C	CG	73.25	PASS	AB=0.826;AC=5;AF=0.104;AN=48;BaseQRankSum=1.654;DP=446;FS=11.376;HRun=0;HaplotypeScore=72.6116;InbreedingCoeff=0.3022;MQ=33.46;MQ0=102;MQRankSum=-1.469;QD=2.36;ReadPosRankSum=-0.821;VQSLOD=1.2982;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:31:72.10:0,72,924	0/0:6,0:4:5.99:0,6,49	0/0:60,0:7:18:0,18,212	0/0:61,0:9:20.30:0,20,254	./.	0/0:9,0:6:1.25:0,1,3	./.	0/0:15,1:3:1.55:0,2,4	0/1:4,3:5:35.75:42,0,36	0/0:26,0:19:51.13:0,51,690	0/0:1,0:1:0:0,0,0	0/0:25,0:21:27.09:0,27,377	0/0:13,0:10:12.03:0,12,151	0/0:10,0:9:15.01:0,15,185	0/0:35,0:22:16.10:0,16,94	0/0:14,0:8:5.91:0,6,39	0/0:17,0:11:5.84:0,6,40	0/0:10,0:9:18.06:0,18,251	1/1:4,2:3:6.02:96,6,0	./.	0/1:11,0:8:1.88:2,0,2	0/0:6,0:5:9.03:0,9,126	0/0:12,0:12:24.06:0,24,318	0/0:23,0:20:36.03:0,36,474	0/0:11,0:11:27.09:0,27,378	0/1:5,2:4:35.78:36,0,111	0/0:1,1:2:3.01:0,3,42	./.
chr10	92314866	.	T	TACAC	458.91	PASS	AC=16;AF=0.667;AN=24;BaseQRankSum=3.187;DP=270;FS=0.000;HRun=0;HaplotypeScore=46.1531;InbreedingCoeff=0.4899;MQ=31.27;MQ0=76;MQRankSum=-1.949;QD=6.95;ReadPosRankSum=-0.382;VQSLOD=1.4042;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:28:39.09:0,39,557	./.	0/0:42,0:6:8.20:0,8,160	./.	./.	1/1:2,6:6:6.02:125,6,0	1/1:8,4:4:8.50:97,8,0	./.	./.	./.	./.	./.	1/1:6,0:6:3.01:52,3,0	1/1:3,0:2:3.01:65,3,0	./.	./.	1/1:6,0:5:3.01:52,3,0	0/0:7,0:6:2.84:0,3,14	./.	./.	1/1:10,0:10:8.98:97,9,0	./.	1/1:10,0:10:2.99:23,3,0	0/0:7,1:8:3.01:0,3,33	./.	./.	./.	1/1:1,0:1:3.01:52,3,0
chr10	92315045	.	TAC	T	475.19	PASS	AB=0.987;AC=11;AF=0.229;AN=48;BaseQRankSum=-2.621;DP=340;FS=1.182;HRun=0;HaplotypeScore=92.7725;InbreedingCoeff=0.3149;MQ=35.70;MQ0=28;MQRankSum=1.784;QD=3.60;ReadPosRankSum=0.535;VQSLOD=1.5973;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:21:13.37:13,0,217	1/1:8,1:9:10.13:86,10,0	0/0:23,0:2:5.89:0,6,59	./.	0/0:2,0:1:2.99:0,3,24	1/1:13,0:12:0.47:1,0,0	0/0:8,0:8:2.11:0,2,18	0/0:6,0:6:8.88:0,9,58	0/0:7,0:5:2.97:0,3,21	0/0:18,0:14:20.74:0,21,157	0/0:8,0:7:1.36:0,1,3	0/0:18,0:18:2.79:0,3,20	0/0:11,0:9:5.78:0,6,46	0/0:10,0:8:2.44:0,2,6	1/1:20,9:28:28.98:288,29,0	./.	1/1:14,14:23:20.71:206,21,0	0/0:6,0:5:3.42:0,3,25	0/1:8,0:7:0.61:1,0,22	./.	0/1:21,0:17:6.18:6,0,17	0/0:16,0:15:2.80:0,3,13	0/0:7,0:6:3.45:0,3,22	./.	0/0:10,0:8:9.48:0,9,85	0/0:6,0:5:8.96:0,9,72	0/0:3,0:3:2.99:0,3,24	0/0:5,0:4:0:0,0,0
chr10	92315104	.	GAC	G	72.45	PASS	AB=0.932;AC=6;AF=0.150;AN=40;BaseQRankSum=0.246;DP=281;FS=0.000;HRun=0;HaplotypeScore=58.8744;InbreedingCoeff=-0.0156;MQ=38.17;MQ0=51;MQRankSum=1.003;QD=0.75;ReadPosRankSum=1.584;VQSLOD=1.1736;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,6:36:89.24:89,0,421	0/1:13,1:13:7.37:7,0,290	0/0:31,0:1:2.99:0,3,24	0/0:32,0:5:11.97:0,12,112	0/1:2,0:2:0:0,0,0	./.	0/0:4,0:4:6:0,6,51	0/0:1,0:1:2.97:0,3,20	./.	0/0:13,0:9:11.94:0,12,92	./.	0/0:15,0:12:5.45:0,5,58	0/0:7,0:6:2.97:0,3,43	0/0:5,0:4:3.01:0,3,40	0/0:23,1:22:21.06:0,21,303	0/0:6,0:6:2.97:0,3,20	0/1:34,1:37:61.33:61,0,873	0/0:4,0:6:3:0,3,26	./.	./.	0/0:14,0:12:8.49:0,8,107	1/1:4,0:4:0.47:1,0,0	0/0:5,0:5:2.60:0,3,42	0/0:7,0:6:0:0,0,0	./.	0/0:3,0:2:1.39:0,1,37	./.	./.
chr10	92315344	.	T	TTCTGGGGGTCAGCAGTG	40815.88	PASS	AB=0.784;AC=21;AF=0.375;AN=56;BaseQRankSum=1.925;DP=670;FS=42.338;HRun=0;HaplotypeScore=293.1549;InbreedingCoeff=0.9229;MQ=85.16;MQ0=0;MQRankSum=-17.965;QD=166.60;ReadPosRankSum=0.214;VQSLOD=3.6504;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,6270	0/0:12,0:10:30.06:0,30,1236	0/0:24,0:24:69.24:0,69,3161	0/0:29,0:30:71.47:0,71,2708	1/1:5,6:12:20.74:1540,21,0	1/1:11,7:21:42.14:3291,42,0	1/1:26,4:30:78.27:5162,78,0	0/0:32,0:32:90.30:0,90,3821	1/1:17,10:31:72.25:5780,72,0	0/0:20,0:19:51.17:0,51,1904	0/0:14,0:13:33.07:0,33,1300	0/0:36,0:36:99:0,105,4805	0/0:29,0:29:78.27:0,78,3576	0/0:31,0:31:87.30:0,87,3981	0/0:23,0:23:66.20:0,66,2811	1/1:12,14:28:65.79:4879,66,0	0/0:27,0:27:78.27:0,78,3768	0/0:24,0:24:69.24:0,69,3190	1/1:10,4:16:48.16:2754,48,0	1/1:11,7:18:42.10:3201,42,0	1/1:20,4:29:41.55:3206,42,0	0/0:24,0:22:56.97:0,57,2180	0/0:18,0:18:51.13:0,51,2249	0/0:21,0:21:60.21:0,60,2869	0/0:16,0:16:45.15:0,45,2057	0/1:21,7:29:70.76:4980,0,71	1/1:8,9:21:51.18:3802,51,0	1/1:6,4:10:27.09:2220,27,0
chr10	92316282	.	AAC	A	794.59	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.057;DP=654;FS=5.287;HRun=0;HaplotypeScore=80.0982;InbreedingCoeff=0.9543;MQ=81.78;MQ0=1;MQRankSum=-0.879;QD=33.11;ReadPosRankSum=-2.901;VQSLOD=4.6997;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,2417	0/0:10,0:10:27.08:0,27,450	0/0:28,0:26:54.91:0,55,970	0/0:16,0:13:15.30:0,15,447	0/0:32,0:32:90.24:0,90,1490	0/0:21,0:21:63.22:0,63,1099	0/0:26,0:25:75.23:0,75,1265	1/1:1,23:24:66.21:889,66,0	0/0:17,0:17:51.17:0,51,898	0/0:26,0:26:72.24:0,72,1234	0/0:15,0:15:42.14:0,42,729	0/0:24,0:24:69.24:0,69,1216	0/0:13,0:13:36.11:0,36,605	0/0:30,0:30:90.28:0,90,1533	0/0:19,0:19:51.16:0,51,854	0/0:20,0:19:51.16:0,51,873	0/0:35,0:35:99:0,99,1715	0/0:11,0:11:27.09:0,27,467	0/0:24,0:24:63.22:0,63,1116	0/0:14,0:14:36.12:0,36,626	0/0:51,0:51:99:0,141,2456	0/0:24,0:24:69.22:0,69,1171	0/0:15,0:15:45.15:0,45,789	0/0:20,0:20:54.17:0,54,929	0/0:15,0:15:42.14:0,42,740	0/0:40,0:40:99:0,117,2034	0/0:30,0:30:87.30:0,87,1512	0/0:5,0:5:12.04:0,12,212
chr10	92316902	.	TC	T	1345.18	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.090;DP=713;FS=6.276;HRun=6;HaplotypeScore=129.8880;InbreedingCoeff=0.9719;MQ=66.90;MQ0=19;MQRankSum=-0.893;QD=19.50;ReadPosRankSum=2.604;VQSLOD=2.2626;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:98.10:0,98,1226	0/0:5,0:5:9.01:0,9,96	0/0:55,1:23:17.10:0,17,278	0/0:83,0:27:46.38:0,46,380	0/0:20,0:20:37.34:0,37,459	1/1:0,18:18:36.09:392,36,0	1/1:2,14:16:35.79:368,36,0	0/0:4,0:20:18.74:0,19,153	0/0:26,0:27:57.57:0,58,662	0/0:25,0:24:57.18:0,57,741	0/0:9,0:9:21.04:0,21,258	0/0:20,0:19:57.18:0,57,735	0/0:24,0:24:62.21:0,62,776	0/0:21,0:21:47.87:0,48,583	0/0:40,0:40:75.97:0,76,911	1/1:5,30:35:68.20:728,68,0	0/0:15,0:14:30.09:0,30,370	0/0:16,0:15:45.13:0,45,570	0/0:14,0:13:34.90:0,35,409	0/0:22,0:23:38.87:0,39,578	0/0:34,0:34:66.46:0,66,815	0/0:19,0:19:52.98:0,53,664	0/0:19,0:19:48.11:0,48,581	0/0:26,0:25:62.83:0,63,806	0/0:20,0:20:51.17:0,51,666	0/0:19,0:19:43.95:0,44,551	0/0:29,0:29:68.37:0,68,808	0/0:14,0:14:39.12:0,39,496
chr10	92316936	.	CTCTCTCTG	C	5968.24	PASS	AB=0.880;AC=29;AF=0.518;AN=56;BaseQRankSum=6.342;DP=702;FS=0.000;HRun=0;HaplotypeScore=185.3795;InbreedingCoeff=0.7103;MQ=57.51;MQ0=34;MQRankSum=-9.494;QD=16.26;ReadPosRankSum=-3.576;VQSLOD=3.4036;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:57.20:0,57,2003	1/1:2,0:2:6.02:146,6,0	0/1:73,0:21:30.79:31,0,318	0/0:112,0:27:9.27:0,9,158	1/1:7,0:7:2.55:25,3,0	1/1:18,0:18:23.83:345,24,0	1/1:17,0:15:8.94:114,9,0	1/1:32,0:27:45.15:1065,45,0	1/1:20,0:18:17.64:231,18,0	0/0:23,0:22:47.79:0,48,1356	0/0:11,0:11:24.08:0,24,655	0/0:17,0:16:36.11:0,36,883	0/0:25,0:25:45.57:0,46,1215	0/0:11,0:11:15.52:0,16,518	1/1:32,0:32:26.42:365,26,0	1/1:31,0:30:41.97:772,42,0	0/1:18,0:17:44.33:132,0,44	0/0:22,0:21:45.05:0,45,1221	1/1:9,0:6:5.38:85,5,0	1/1:24,0:23:18.48:302,18,0	1/1:14,0:12:2.42:54,2,0	0/0:18,0:18:30.10:0,30,1003	0/0:19,0:18:24.08:0,24,773	0/0:24,0:23:39.13:0,39,1129	0/0:18,0:18:26.97:0,27,856	0/1:14,18:32:1.92:985,0,2	1/1:27,0:24:35.21:823,35,0	1/1:10,0:10:21.07:494,21,0
chr10	92316957	.	T	TC	2285.95	PASS	AB=0.952;AC=22;AF=0.393;AN=56;BaseQRankSum=8.677;DP=607;FS=0.965;HRun=1;HaplotypeScore=139.8869;InbreedingCoeff=0.3181;MQ=47.46;MQ0=32;MQRankSum=-7.442;QD=7.96;ReadPosRankSum=-4.201;VQSLOD=-0.7577;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:68.99:0,69,896	1/1:7,0:7:6:68,6,0	0/0:26,0:7:13.03:0,13,158	0/0:63,0:9:5.20:0,5,84	1/1:14,0:14:3:25,3,0	0/1:17,0:16:99:142,0,119	0/1:18,0:15:43.48:43,0,63	0/1:25,3:23:99:387,0,175	1/1:11,5:14:17.08:160,17,0	0/0:28,0:26:72.19:0,72,904	0/0:10,0:10:27.09:0,27,355	0/0:16,0:15:39.11:0,39,497	0/0:23,0:23:51.62:0,52,647	0/0:17,0:16:15.05:0,15,195	1/1:31,0:31:25.18:221,25,0	0/1:26,1:26:51.66:327,0,52	0/1:14,1:13:12.85:13,0,34	0/0:22,0:20:54.12:0,54,681	0/1:6,1:4:48.92:57,0,49	1/1:25,1:25:17.01:175,17,0	1/1:9,1:7:2.92:30,3,0	0/0:24,0:24:30.10:0,30,390	0/0:20,0:19:23.81:0,24,312	0/0:29,0:25:42.14:0,42,548	0/0:12,0:12:26.89:0,27,352	0/1:29,2:29:99:266,0,206	1/1:23,5:22:37.74:353,38,0	0/1:10,0:8:7.52:207,0,8
chr10	92316958	.	CTGT	C	2965.84	PASS	AB=0.757;AC=23;AF=0.411;AN=56;BaseQRankSum=8.596;DP=601;FS=0.935;HRun=0;HaplotypeScore=141.6336;InbreedingCoeff=0.3713;MQ=46.31;MQ0=34;MQRankSum=-8.634;QD=10.41;ReadPosRankSum=-3.812;VQSLOD=2.6334;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:69.16:0,69,1674	1/1:5,1:7:6.02:71,6,0	0/0:25,0:7:5.94:0,6,265	0/0:60,0:8:10.55:0,11,152	1/1:10,4:14:2.70:25,3,0	0/1:11,3:16:99:182,0,144	0/1:11,8:16:58.41:58,0,108	0/1:16,8:22:99:474,0,177	1/1:10,6:14:17.05:164,17,0	0/0:28,0:26:72.23:0,72,1545	0/0:10,0:10:27.09:0,27,641	0/0:16,0:15:39.12:0,39,882	0/0:21,0:22:51.63:0,52,1131	0/0:17,0:16:15.05:0,15,370	1/1:12,9:31:28.54:276,29,0	0/1:10,11:25:45.53:400,0,46	0/1:8,0:13:48.64:49,0,82	0/0:22,0:20:54.07:0,54,1164	0/1:6,1:4:53.78:54,0,63	1/1:17,8:25:16.32:187,16,0	1/1:8,1:6:2.59:55,3,0	0/0:24,0:24:30.57:0,31,740	0/0:20,0:19:24.33:0,24,580	0/0:30,0:26:42.14:0,42,989	0/0:12,0:12:26.81:0,27,665	0/1:31,0:29:99:469,0,267	1/1:15,10:21:25.91:442,26,0	1/1:3,4:8:7.43:252,7,0
chr10	92316992	.	TCTCTCTCTCTCTCTCACACACACACACACACACACACA	T	2878.53	PASS	AB=0.995;AC=14;AF=0.269;AN=52;BaseQRankSum=5.458;DP=545;FS=2.724;HRun=0;HaplotypeScore=315.8255;InbreedingCoeff=0.0674;MQ=38.80;MQ0=49;MQRankSum=-5.527;QD=12.04;ReadPosRankSum=0.349;VQSLOD=1.6686;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:69.22:0,69,4450	1/1:3,7:10:5.84:444,6,0	./.	./.	0/1:17,0:17:0:0,0,1	0/0:22,0:21:32.35:0,32,1478	0/0:22,0:16:6.49:0,6,171	0/1:18,0:14:50.34:50,0,577	0/1:27,0:22:99:215,0,149	0/1:21,0:18:26.28:26,0,1622	0/0:15,0:15:21.07:0,21,899	0/0:14,0:12:24.08:0,24,1083	0/0:18,0:17:24.74:0,25,1015	0/0:23,0:20:6.02:0,6,287	1/1:12,16:28:11.83:704,12,0	0/0:24,0:22:35.14:0,35,2005	0/1:19,1:18:99:840,0,290	0/0:22,0:16:27.05:0,27,976	0/1:9,0:6:99:141,0,237	0/1:24,0:23:2.45:2,0,4	0/0:13,0:7:0:0,0,0	0/0:27,0:27:12.04:0,12,413	0/0:20,0:18:11.47:0,11,437	0/0:28,0:20:18.06:0,18,478	0/0:21,0:17:21.54:0,22,1176	0/1:30,0:25:62.24:62,0,1230	0/1:24,0:17:99:373,0,289	0/1:11,0:8:99:168,0,166
chr10	92317000	.	TCTCTCTCACACACA	T	3819.07	PASS	AB=1.000;AC=27;AF=0.519;AN=52;BaseQRankSum=2.184;DP=526;FS=9.919;HRun=0;HaplotypeScore=176.3972;InbreedingCoeff=-0.0643;MQ=40.05;MQ0=41;MQRankSum=2.686;QD=9.45;ReadPosRankSum=2.713;VQSLOD=1.5187;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:36.69:0,37,1292	1/1:10,0:10:5.59:115,6,0	./.	./.	0/0:15,0:15:0.38:0,0,1	0/1:21,0:20:22.95:332,0,23	0/0:21,0:15:3.47:0,3,27	0/0:14,0:11:20.98:0,21,279	0/1:25,0:20:88.35:97,0,88	1/1:12,10:18:4.44:408,4,0	1/1:16,0:16:16.75:188,17,0	1/1:16,0:14:20.03:240,20,0	1/1:18,0:17:17.23:266,17,0	0/1:24,0:22:18.95:66,0,19	0/1:28,0:28:1.82:143,0,2	1/1:28,0:26:11.26:680,11,0	0/1:19,0:17:99:237,0,103	0/1:24,0:18:72.02:152,0,72	0/1:8,0:7:46.85:47,0,73	0/0:22,0:21:1.41:0,1,2	0/0:14,0:10:0:0,0,0	0/1:29,0:29:0.02:0,0,0	1/1:20,0:18:5.72:149,6,0	0/1:29,0:21:2.21:149,0,2	0/1:20,0:16:6.11:276,0,6	0/1:20,0:16:45.46:45,0,345	0/1:18,0:14:95.61:145,0,96	0/1:9,0:6:83.94:84,0,89
chr10	92317002	.	TCTCTCACACACA	T	4414.22	PASS	AB=0.959;AC=32;AF=0.615;AN=52;BaseQRankSum=-0.198;DP=514;FS=6.730;HRun=0;HaplotypeScore=161.2793;InbreedingCoeff=0.1150;MQ=40.20;MQ0=39;MQRankSum=2.604;QD=10.85;ReadPosRankSum=2.056;VQSLOD=3.1068;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:29.20:0,29,932	1/1:10,0:10:5.85:109,6,0	./.	./.	0/1:15,0:15:0:0,0,0	1/1:22,0:21:6.16:458,6,0	0/0:21,0:15:0.47:0,0,2	0/0:14,0:11:17.95:0,18,189	0/1:23,0:18:62.99:98,0,63	1/1:22,0:18:36.09:511,36,0	1/1:15,0:15:16.87:214,17,0	1/1:13,0:13:20.66:355,21,0	1/1:18,0:17:17.85:249,18,0	1/1:5,18:21:3.01:72,3,0	0/1:28,0:28:2.22:129,0,2	1/1:28,0:26:40.62:862,41,0	0/1:19,0:17:50.37:200,0,50	0/1:24,0:18:63.60:107,0,64	0/1:7,0:6:30.21:50,0,30	0/0:22,0:21:0.47:0,0,1	0/0:14,0:10:0:0,0,0	0/1:8,19:27:0.06:0,0,0	1/1:20,0:19:5.80:149,6,0	1/1:27,0:20:15.04:204,15,0	1/1:20,0:16:17.20:345,17,0	0/1:19,0:15:66.80:67,0,247	0/1:18,0:14:60.40:149,0,60	0/1:8,0:5:58.34:86,0,58
chr10	92317006	.	TCACACACACACACACACACACA	T	2888.24	PASS	AB=0.802;AC=20;AF=0.417;AN=48;BaseQRankSum=2.757;DP=511;FS=1.871;HRun=0;HaplotypeScore=209.6446;InbreedingCoeff=0.6322;MQ=40.93;MQ0=36;MQRankSum=-6.004;QD=16.05;ReadPosRankSum=1.322;VQSLOD=2.8061;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:33.11:0,33,2055	1/1:10,0:10:6.02:311,6,0	./.	./.	0/1:8,7:17:0:0,0,0	0/0:21,0:23:30.26:0,30,957	0/0:20,0:15:0.47:0,0,1	1/1:12,0:13:3.48:63,3,0	1/1:14,7:19:11.62:468,12,0	0/0:21,0:17:24.42:0,24,767	0/0:9,0:15:9:0,9,310	0/0:9,0:13:12.04:0,12,363	0/0:12,0:17:15.35:0,15,283	0/0:23,0:21:3.01:0,3,63	1/1:27,1:28:11.88:475,12,0	0/0:27,0:26:42.35:0,42,1426	1/1:16,0:16:14.08:430,14,0	0/0:16,0:18:18.06:0,18,491	1/1:5,1:6:2.95:173,3,0	1/1:16,2:20:2.97:20,3,0	./.	0/0:29,0:29:2.88:0,3,122	0/0:22,0:20:8.26:0,8,300	./.	0/0:19,0:16:18.05:0,18,522	0/1:18,0:16:99:196,0,405	1/1:10,4:10:12.51:603,13,0	1/1:4,1:4:6.02:312,6,0
chr10	92317028	.	A	AG	117.95	PASS	AB=0.977;AC=9;AF=0.161;AN=56;BaseQRankSum=4.409;DP=530;FS=0.000;HRun=0;HaplotypeScore=127.5029;InbreedingCoeff=0.1987;MQ=42.51;MQ0=32;MQRankSum=-4.365;QD=0.94;ReadPosRankSum=-0.393;VQSLOD=2.2912;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:54.05:0,54,646	0/0:9,0:9:4.72:0,5,16	0/0:12,0:4:5.56:0,6,78	0/0:14,0:5:14.98:0,15,181	0/1:20,0:20:0:1,0,0	0/0:27,0:27:50.67:0,51,560	0/0:23,0:19:18.06:0,18,249	0/1:8,0:6:14.81:20,0,15	0/1:17,0:16:7.05:19,0,7	0/0:24,0:20:45.29:0,45,544	0/0:17,0:17:23.94:0,24,270	0/0:18,0:18:26.46:0,26,326	0/0:17,0:16:15.35:0,15,183	0/0:23,0:21:9.03:0,9,119	1/1:17,3:20:3.23:71,3,0	0/0:30,0:28:50.04:0,50,400	0/1:13,2:14:31.14:111,0,31	0/0:30,0:23:30.10:0,30,414	0/0:10,0:7:11.65:0,12,104	0/1:20,0:19:0.53:1,0,28	0/1:12,0:9:0.22:0,0,0	0/0:32,0:32:12.04:0,12,165	0/0:21,0:20:13.91:0,14,128	0/0:24,0:18:8.98:0,9,122	0/0:23,0:19:29.64:0,30,305	0/0:15,0:14:29.28:0,29,279	0/1:11,0:8:12.35:12,0,46	0/0:6,0:4:11.35:0,11,96
chr10	92317030	.	A	AG	91.69	PASS	AB=0.931;AC=7;AF=0.125;AN=56;BaseQRankSum=3.527;DP=520;FS=0.000;HRun=0;HaplotypeScore=130.9840;InbreedingCoeff=0.0512;MQ=43.37;MQ0=31;MQRankSum=-3.870;QD=1.00;ReadPosRankSum=-0.412;VQSLOD=1.6444;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:54.05:0,54,644	0/0:12,0:12:10.73:0,11,86	0/1:15,0:7:11.31:11,0,110	0/0:16,0:6:17.41:0,17,201	0/0:17,0:17:2.32:0,2,37	0/0:26,0:26:53.68:0,54,600	0/0:24,0:20:18.06:0,18,249	0/0:8,0:6:3.19:0,3,36	0/1:14,2:15:4.79:68,0,5	0/0:24,0:20:45.26:0,45,546	0/0:17,0:17:23.99:0,24,308	0/0:19,0:19:29.47:0,29,365	0/0:15,0:15:14.88:0,15,181	0/0:23,0:21:9.03:0,9,119	1/1:22,0:22:0.41:38,0,0	0/0:31,0:29:53.04:0,53,423	0/1:17,0:16:55.24:55,0,96	0/0:30,0:23:36.08:0,36,469	0/0:8,0:5:11.25:0,11,127	0/0:14,1:14:9.03:0,9,112	0/0:9,0:7:8.68:0,9,84	0/0:31,0:31:18.06:0,18,245	0/0:19,0:18:13.91:0,14,130	0/0:25,0:19:8.98:0,9,124	0/0:22,0:19:32.63:0,33,311	0/1:10,1:11:15.32:15,0,266	0/1:9,1:9:24.84:25,0,109	0/0:6,0:4:11.36:0,11,105
chr10	92319147	.	C	CT	1146.18	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=9.125;DP=523;FS=1.281;HRun=8;HaplotypeScore=55.0531;InbreedingCoeff=0.8168;MQ=61.10;MQ0=0;MQRankSum=-0.290;QD=20.84;ReadPosRankSum=-0.075;VQSLOD=3.4448;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:92.98:0,93,839	0/0:11,0:11:24:0,24,215	0/0:6,0:6:2.78:0,3,50	0/1:3,0:2:5.44:5,0,20	0/0:26,0:26:69.02:0,69,627	1/1:5,20:25:51.15:585,51,0	1/1:4,11:15:30.08:340,30,0	0/0:34,0:33:87:0,87,784	0/0:25,0:25:72.03:0,72,655	0/0:18,0:18:45.01:0,45,412	0/0:27,0:27:69.02:0,69,629	0/0:15,0:15:42.02:0,42,384	0/0:16,0:16:42:0,42,376	0/0:14,0:14:39.02:0,39,357	0/0:19,0:19:54.03:0,54,494	1/1:2,9:12:33.07:360,33,0	0/0:32,0:32:87.04:0,87,796	0/0:20,0:20:29.53:0,30,339	0/0:12,0:11:33.02:0,33,302	0/0:20,0:20:54.03:0,54,494	0/0:8,0:8:21.01:0,21,192	0/0:9,0:9:24.01:0,24,219	0/0:15,0:15:42.02:0,42,384	0/0:9,0:9:21.01:0,21,192	0/0:19,0:19:51.02:0,51,467	0/0:16,0:16:45.02:0,45,409	0/0:41,0:41:99:0,114,1033	0/0:17,0:17:45.02:0,45,412
chr10	92319969	.	AACACACAC	A	1145.83	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=-0.685;DP=561;FS=0.773;HRun=0;HaplotypeScore=207.6613;InbreedingCoeff=0.7875;MQ=63.04;MQ0=9;MQRankSum=-2.135;QD=16.14;ReadPosRankSum=-1.538;VQSLOD=2.5418;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:64.08:0,64,2178	0/0:9,0:8:12.71:0,13,169	0/0:33,0:22:27.31:0,27,1452	0/0:28,0:22:54.17:0,54,1801	0/0:25,0:25:41.67:0,42,809	1/1:20,3:24:7.27:151,7,0	0/0:13,2:16:3.01:0,3,49	1/1:14,2:23:40.02:881,40,0	0/0:23,0:23:38.35:0,38,755	0/0:25,0:25:41.28:0,41,1062	0/0:13,0:13:10.08:0,10,183	0/0:14,0:14:18.79:0,19,362	0/0:12,0:12:24.08:0,24,579	0/0:18,0:18:25.38:0,25,659	./.	1/1:19,2:21:6.78:240,7,0	0/0:17,0:17:23.15:0,23,311	0/0:22,0:22:39.77:0,40,581	0/0:16,0:16:36.07:0,36,519	0/0:17,0:17:19.42:0,19,393	0/0:15,0:14:9.85:0,10,147	0/0:21,0:21:12.30:0,12,205	0/0:11,0:11:17.17:0,17,312	0/0:34,0:34:48.56:0,49,943	0/0:10,0:10:6.01:0,6,57	0/0:23,0:23:57.63:0,58,996	0/0:22,0:21:22.28:0,22,581	0/0:12,0:12:21.95:0,22,259
chr10	92319982	.	A	ACTCTCTCT	5442.13	PASS	AB=0.896;AC=36;AF=0.643;AN=56;BaseQRankSum=2.951;DP=576;FS=11.014;HRun=0;HaplotypeScore=195.0977;InbreedingCoeff=0.3383;MQ=50.51;MQ0=44;MQRankSum=-0.097;QD=12.48;ReadPosRankSum=0.718;VQSLOD=3.2484;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:30:63.10:0,63,1661	1/1:8,0:7:3.33:90,3,0	0/0:26,0:15:40.41:0,40,862	0/0:24,0:18:42.14:0,42,1061	1/1:30,0:28:22.54:337,23,0	0/1:21,0:21:3.31:44,0,3	1/1:13,0:10:1.25:3,1,0	1/1:23,0:18:3.50:127,3,0	1/1:22,0:22:27.23:515,27,0	1/1:25,0:22:41.90:537,42,0	0/1:4,0:15:0.37:2,0,0	1/1:15,0:13:17.08:318,17,0	0/1:9,0:8:24.78:107,0,25	0/1:19,0:17:24.75:279,0,25	0/1:8,17:23:0.07:0,0,0	0/1:21,0:19:20.02:20,0,85	1/1:13,0:13:7.51:260,8,0	0/1:23,0:23:40.83:314,0,41	0/1:25,0:24:32.12:488,0,32	1/1:21,0:21:13.13:242,13,0	0/0:13,0:12:3.47:0,3,88	0/0:8,0:21:5.19:0,5,15	1/1:17,0:13:9.38:108,9,0	1/1:31,0:30:40.75:454,41,0	0/0:13,0:13:2.49:0,2,6	1/1:25,0:23:27.17:538,27,0	1/1:19,0:17:30.92:427,31,0	1/1:15,0:14:20.42:230,20,0
chr10	92320004	.	TCACACACACACA	T	454.68	PASS	AB=0.857;AC=8;AF=0.154;AN=52;BaseQRankSum=1.484;DP=565;FS=5.227;HRun=0;HaplotypeScore=206.3845;InbreedingCoeff=-0.0598;MQ=41.90;MQ0=52;MQRankSum=-3.439;QD=3.44;ReadPosRankSum=-0.256;VQSLOD=1.9981;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:28:22.32:0,22,867	0/0:7,0:6:6.02:0,6,218	./.	./.	0/0:22,11:34:8.27:0,8,46	0/0:18,0:17:3.01:0,3,78	1/1:20,0:16:0.47:1,0,0	0/0:27,0:21:3.01:0,3,91	0/1:14,0:15:36.43:58,0,36	0/0:24,0:19:20.97:0,21,611	0/0:20,0:19:14.84:0,15,752	0/0:18,0:15:15.52:0,16,772	0/0:15,0:19:23.57:0,24,727	0/0:23,0:20:8.95:0,9,200	0/0:29,0:26:23.90:0,24,1024	0/0:25,0:23:8.92:0,9,349	0/0:10,0:9:7.84:0,8,328	0/0:18,0:18:25.33:0,25,1121	0/1:22,0:23:3.42:90,0,3	0/1:16,0:22:14.22:42,0,14	0/0:26,0:17:3.01:0,3,100	0/0:22,0:21:4.61:0,5,152	0/0:13,0:12:3.01:0,3,30	0/0:28,0:27:15.39:0,15,365	0/0:6,0:14:5.75:0,6,180	0/1:19,0:17:77.89:96,0,78	0/1:13,5:16:54.92:92,0,55	0/1:7,3:9:32.64:194,0,33
chr10	92321385	.	C	CGTGTGTGTGTGT	1463.05	PASS	AB=0.689;AC=21;AF=0.375;AN=56;BaseQRankSum=4.646;DP=558;FS=11.791;HRun=0;HaplotypeScore=155.3166;InbreedingCoeff=0.5138;MQ=51.71;MQ0=17;MQRankSum=-5.802;QD=6.28;ReadPosRankSum=-2.306;VQSLOD=1.7749;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:75:0,75,2098	1/1:5,0:5:5.99:49,6,0	0/0:33,0:7:8.96:0,9,116	0/0:52,0:17:4.61:0,5,128	1/1:8,0:16:0.76:9,1,0	0/0:16,0:16:5.94:0,6,41	0/0:24,0:24:2.79:0,3,13	1/1:25,0:24:21.13:141,21,0	1/1:2,0:11:2.47:36,2,0	0/0:18,0:16:33.07:0,33,769	0/0:12,0:12:19.57:0,20,354	0/0:18,0:18:41.81:0,42,929	0/0:13,0:13:26.66:0,27,704	0/0:8,0:9:20.89:0,21,499	0/1:3,9:17:0.31:0,0,0	0/0:13,0:13:2.98:0,3,21	1/1:9,11:24:3.01:100,3,0	0/0:17,0:15:31.22:0,31,656	1/1:16,0:13:16.04:239,16,0	1/1:3,0:9:3.01:44,3,0	1/1:19,0:46:2.14:6,2,0	0/0:4,0:4:9.03:0,9,209	0/0:5,0:5:3.01:0,3,105	0/0:26,0:28:45.30:0,45,1626	0/0:14,0:15:37.80:0,38,806	0/1:19,0:24:50.14:501,0,50	0/1:12,0:18:40.18:425,0,40	1/1:4,0:13:6.02:81,6,0
chr10	92321400	.	G	GTGTGTA	1806.81	PASS	AB=0.950;AC=15;AF=0.268;AN=56;BaseQRankSum=7.875;DP=554;FS=8.432;HRun=0;HaplotypeScore=106.4272;InbreedingCoeff=0.0218;MQ=50.04;MQ0=21;MQRankSum=-5.556;QD=7.44;ReadPosRankSum=3.573;VQSLOD=1.4989;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:77.77:0,78,1718	0/0:6,0:6:6.45:0,6,48	0/0:32,0:6:17.41:0,17,241	0/0:43,0:13:29.11:0,29,423	0/1:15,0:14:24.48:35,0,24	0/1:3,11:16:3.44:80,0,3	1/1:1,20:25:3.01:44,3,0	0/0:24,0:23:31.34:0,31,290	0/1:12,0:12:52.68:75,0,53	0/0:16,0:14:39.09:0,39,740	0/0:13,0:13:4.34:0,4,430	0/0:23,0:22:57.33:0,57,937	0/0:13,0:13:27.09:0,27,558	0/0:10,0:10:24.04:0,24,444	1/1:16,0:16:1.25:4,1,0	1/1:1,10:12:3.01:45,3,0	0/0:20,0:19:0.92:0,1,54	0/0:17,0:15:39.07:0,39,669	0/1:15,0:12:42.95:162,0,43	0/1:10,0:10:65.99:66,0,81	0/1:49,0:44:15.56:16,0,39	0/0:4,0:4:11.91:0,12,222	0/0:6,0:6:11.99:0,12,141	0/0:27,0:27:51.39:0,51,1175	0/0:17,0:17:48.08:0,48,850	0/1:28,0:26:99:668,0,139	0/1:21,0:20:28.01:640,0,28	0/1:24,0:24:99:121,0,218
chr10	92321483	.	C	CT	2693.18	PASS	AB=0.733;AC=26;AF=0.464;AN=56;BaseQRankSum=1.096;DP=392;FS=8.053;HRun=9;HaplotypeScore=81.7385;InbreedingCoeff=0.8170;MQ=71.27;MQ0=2;MQRankSum=-6.550;QD=16.83;ReadPosRankSum=0.949;VQSLOD=3.5307;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:83.91:0,84,729	0/0:9,0:9:26.99:0,27,234	0/0:22,0:17:26.23:0,26,288	0/0:15,0:11:19.25:0,19,159	0/1:10,1:11:0.15:0,0,227	1/1:11,0:17:27.96:154,28,0	1/1:9,0:12:8.99:43,9,0	0/0:23,0:23:53.19:0,53,459	0/0:10,0:10:14.99:0,15,130	1/1:4,17:20:25.08:505,25,0	1/1:5,7:10:27.03:285,27,0	1/1:7,7:14:7:285,7,0	0/1:2,9:11:1.99:208,0,2	1/1:1,6:7:18.01:199,18,0	0/0:6,0:6:11.99:0,12,104	1/1:5,0:6:7.50:34,7,0	0/0:15,0:16:37.98:0,38,313	1/1:2,10:11:30.05:319,30,0	0/0:22,0:21:50.18:0,50,417	0/0:10,0:10:20.97:0,21,179	0/0:7,0:7:5.99:0,6,52	1/1:1,2:3:6.02:66,6,0	1/1:4,1:5:3.01:33,3,0	1/1:4,10:14:30.74:351,31,0	1/1:3,12:15:39.07:419,39,0	0/0:16,1:17:8.85:0,9,311	0/0:23,0:23:47.95:0,48,415	0/0:22,0:21:59.99:0,60,521
chr10	92321492	.	TGA	T	296.27	PASS	AB=0.900;AC=6;AF=0.107;AN=56;BaseQRankSum=1.502;DP=361;FS=6.876;HRun=0;HaplotypeScore=92.4023;InbreedingCoeff=0.5375;MQ=70.14;MQ0=2;MQRankSum=-2.770;QD=7.23;ReadPosRankSum=-5.156;VQSLOD=1.1826;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:83.99:0,84,1430	0/0:9,0:9:27.09:0,27,403	0/0:21,0:16:6.93:0,7,546	0/0:14,0:11:30.06:0,30,304	0/0:12,0:12:18.32:0,18,452	1/1:15,2:17:10.09:245,10,0	0/1:6,2:8:0.83:43,0,1	0/0:23,0:23:46.39:0,46,870	0/0:6,0:6:15.05:0,15,245	0/0:22,0:21:4.08:0,4,386	0/0:11,1:10:27.88:0,28,205	0/1:11,0:11:2.77:3,0,197	0/0:9,0:9:23.53:0,24,231	0/0:7,0:7:17.49:0,17,140	0/0:6,0:5:15.05:0,15,204	1/1:2,3:5:7.83:122,8,0	0/0:17,0:17:48.13:0,48,661	0/0:12,0:11:3.92:0,4,156	0/0:18,0:17:50.82:0,51,710	0/0:7,0:7:21.07:0,21,319	0/0:3,0:3:6.02:0,6,103	0/0:2,0:2:5.50:0,6,37	0/0:2,0:2:6.01:0,6,66	0/0:14,0:14:11.06:0,11,218	0/0:14,0:14:37.42:0,37,247	0/0:18,0:18:23.54:0,24,645	0/0:20,0:20:51.17:0,51,722	0/0:20,0:20:60.20:0,60,993
chr10	92321495	.	T	TTTTA	9734.45	PASS	AB=0.969;AC=48;AF=0.889;AN=54;BaseQRankSum=-1.654;DP=364;FS=1.695;HRun=0;HaplotypeScore=77.5270;InbreedingCoeff=0.5112;MQ=69.88;MQ0=2;MQRankSum=-3.865;QD=31.71;ReadPosRankSum=0.069;VQSLOD=4.4113;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:63.22:0,63,1045	1/1:5,5:10:15.05:370,15,0	0/0:23,0:18:20.86:0,21,254	0/1:14,0:11:55.05:55,0,55	1/1:4,9:14:33.11:734,33,0	1/1:10,6:16:27.01:573,27,0	1/1:5,2:7:6.02:147,6,0	1/1:12,6:19:21.04:369,21,0	1/1:4,2:6:3.01:74,3,0	1/1:13,9:21:33.11:749,33,0	1/1:6,6:10:15.05:331,15,0	1/1:5,5:10:15.05:351,15,0	1/1:7,1:8:3.01:74,3,0	1/1:5,1:6:9.03:191,9,0	1/1:2,4:6:12.04:293,12,0	0/1:5,0:5:0:0,0,0	1/1:6,11:17:30.10:739,30,0	1/1:5,7:11:21.07:472,21,0	1/1:6,10:16:30.08:660,30,0	1/1:3,5:9:18.06:399,18,0	./.	1/1:1,1:2:3.01:74,3,0	1/1:1,1:3:3.01:74,3,0	1/1:8,6:14:18.05:349,18,0	1/1:8,7:15:33.11:715,33,0	1/1:6,12:18:36.08:834,36,0	1/1:5,14:20:36.12:883,36,0	1/1:20,3:22:9.03:222,9,0
chr10	92321691	.	G	GA	1795.78	PASS	AB=0.870;AC=26;AF=0.464;AN=56;BaseQRankSum=-1.448;DP=425;FS=23.401;HRun=14;HaplotypeScore=47.9355;InbreedingCoeff=0.5600;MQ=54.35;MQ0=34;MQRankSum=-1.283;QD=7.18;ReadPosRankSum=-3.631;VQSLOD=-0.2567;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:31,1:27:8.95:9,0,169	0/0:5,0:5:8.83:0,9,57	0/1:12,0:5:2.83:3,0,46	0/1:11,0:4:2.90:3,0,6	1/1:4,13:18:27.89:231,28,0	1/1:5,3:7:12.47:80,12,0	1/1:11,3:15:32.68:245,33,0	0/1:12,10:24:5.81:197,0,6	1/1:9,2:9:19.77:136,20,0	0/0:9,1:9:14.31:0,14,94	0/0:8,0:9:0.69:0,1,37	0/0:15,1:15:9.56:0,10,119	0/0:8,0:7:14.70:0,15,94	0/0:6,0:6:5.78:0,6,38	0/0:12,0:9:17.45:0,17,107	0/1:2,6:9:3.47:78,0,3	0/0:37,2:35:47.71:0,48,403	0/0:27,0:24:19.23:0,19,221	1/1:17,6:22:12.20:221,12,0	1/1:4,5:7:8.97:72,9,0	1/1:3,6:7:8.97:73,9,0	0/0:4,0:4:5.91:0,6,38	0/1:8,0:6:10.56:11,0,30	0/0:21,0:19:11.54:0,12,154	0/0:15,0:16:14.79:0,15,124	1/1:13,7:18:26.81:217,27,0	1/1:17,5:22:25.56:186,26,0	1/1:5,13:16:26.96:231,27,0
chr10	92322637	.	CACAG	C	5318.99	PASS	AB=0.993;AC=30;AF=0.536;AN=56;BaseQRankSum=-8.745;DP=723;FS=4.989;HRun=0;HaplotypeScore=158.7210;InbreedingCoeff=-0.3538;MQ=69.11;MQ0=10;MQRankSum=1.244;QD=9.19;ReadPosRankSum=2.623;VQSLOD=3.9473;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:57.38:0,57,743	1/1:8,0:8:14.50:131,15,0	0/0:37,0:29:66.82:0,67,735	0/0:37,0:28:63.45:0,63,637	0/1:17,0:17:1.72:249,0,2	0/1:18,0:18:75.01:111,0,75	1/1:28,0:27:26.85:371,27,0	0/1:34,0:34:69.02:507,0,69	0/1:26,0:26:99:145,0,207	0/1:25,0:23:99:124,0,212	0/1:11,0:10:29.46:34,0,29	1/1:37,0:36:5.63:352,6,0	0/1:29,0:29:99:138,0,117	0/1:23,0:22:24.96:132,0,25	0/0:38,1:39:2.74:0,3,42	1/1:25,0:25:1.36:237,1,0	0/1:23,4:26:99:382,0,117	0/1:22,0:22:99:121,0,215	0/1:18,0:18:84.10:238,0,84	0/1:24,0:23:17.13:179,0,17	0/1:61,0:61:99:341,0,420	1/1:19,0:18:4.14:182,4,0	1/1:22,0:22:35.91:287,36,0	0/1:30,0:30:66.28:202,0,66	0/1:10,0:10:56.37:81,0,56	0/1:30,0:30:99:414,0,178	0/1:24,0:23:68.28:226,0,68	0/1:11,0:11:42.10:135,0,42
chr10	92322639	.	CAG	C	7089.02	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-4.059;DP=707;FS=1.375;HRun=0;HaplotypeScore=129.5760;InbreedingCoeff=0.4501;MQ=72.08;MQ0=7;MQRankSum=-1.689;QD=11.85;ReadPosRankSum=4.239;VQSLOD=4.8957;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:42.58:0,43,494	1/1:5,1:6:17.49:153,17,0	0/0:38,0:30:71.21:0,71,758	0/0:40,0:31:72.54:0,73,698	1/1:17,0:17:35.91:287,36,0	0/1:19,0:19:6.13:140,0,6	1/1:27,0:27:37.08:390,37,0	1/1:32,0:32:69.07:598,69,0	0/1:26,0:26:1.72:246,0,2	1/1:24,0:22:22.82:201,23,0	0/1:12,0:11:4.30:64,0,4	1/1:39,0:38:64.04:507,64,0	1/1:29,0:29:11.71:309,12,0	1/1:24,0:23:20.70:237,21,0	1/1:2,28:30:14.43:194,14,0	1/1:25,0:25:30.05:304,30,0	1/1:24,3:27:35.46:558,35,0	0/1:21,0:21:30.32:140,0,30	1/1:18,0:18:23.52:297,24,0	1/1:20,0:19:28.50:232,29,0	0/1:59,0:59:12.81:420,0,13	1/1:17,0:17:29.86:232,30,0	1/1:23,0:23:38.91:311,39,0	1/1:32,0:32:36.29:290,36,0	1/1:10,0:10:14.02:105,14,0	1/1:28,0:28:7.56:486,8,0	1/1:22,0:22:21.86:248,22,0	1/1:11,0:11:2.15:140,2,0
chr10	92323102	.	A	AT	3934.30	PASS	AB=0.938;AC=23;AF=0.411;AN=56;BaseQRankSum=-9.179;DP=557;FS=1.763;HRun=11;HaplotypeScore=58.1093;InbreedingCoeff=0.8829;MQ=65.32;MQ0=5;MQRankSum=1.099;QD=16.96;ReadPosRankSum=-0.757;VQSLOD=4.2763;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:86.50:0,87,771	1/1:2,9:11:17.97:183,18,0	0/0:14,0:8:8.43:0,8,55	0/0:10,0:8:5.04:0,5,30	1/1:5,21:26:42.03:408,42,0	0/0:6,0:22:31.48:0,31,106	0/0:3,0:18:27.43:0,27,94	0/0:27,0:27:35.78:0,36,279	1/1:3,5:8:9.02:91,9,0	0/0:24,1:24:27.20:0,27,328	0/0:21,0:21:49.79:0,50,370	0/0:19,0:19:44.80:0,45,346	0/0:10,0:10:23.90:0,24,186	0/1:14,1:15:6.10:6,0,217	1/1:9,9:18:24.05:244,24,0	0/0:1,0:17:30.55:0,31,88	1/1:9,27:37:68.97:683,69,0	0/0:21,0:21:49.83:0,50,377	1/1:13,16:29:9.82:423,10,0	1/1:3,21:25:65.96:647,66,0	1/1:1,9:9:21.04:213,21,0	0/0:13,1:14:8.39:0,8,248	0/0:23,0:23:58.81:0,59,447	0/0:21,0:19:47.80:0,48,371	0/0:18,1:19:20.37:0,20,341	1/1:11,21:32:19.66:548,20,0	1/1:0,15:15:33.07:335,33,0	1/1:0,5:5:15.03:152,15,0
chr10	92323479	.	T	TCATC	2514.18	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.962;DP=711;FS=1.321;HRun=0;HaplotypeScore=107.0580;InbreedingCoeff=0.8923;MQ=64.34;MQ0=7;MQRankSum=-0.479;QD=31.43;ReadPosRankSum=0.891;VQSLOD=3.4402;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:49.03:0,49,746	1/1:2,4:7:9.03:220,9,0	0/0:38,0:19:33.08:0,33,480	0/0:31,0:21:10.01:0,10,167	0/0:23,0:23:57.19:0,57,934	0/0:16,0:16:39.10:0,39,583	0/0:19,0:19:32.89:0,33,510	0/0:28,0:27:45.09:0,45,634	0/0:32,0:32:84.24:0,84,1289	0/0:19,0:19:48.16:0,48,788	0/0:14,0:14:30.09:0,30,470	0/0:32,0:32:75.24:0,75,1194	0/0:29,0:29:81.18:0,81,1234	0/0:31,0:31:72.23:0,72,1149	1/1:10,27:37:57.20:1377,57,0	0/0:27,0:27:78.26:0,78,1253	1/1:11,23:36:45.15:1054,45,0	0/0:23,0:23:1.77:0,2,716	0/0:21,0:20:39.12:0,39,612	0/0:25,0:24:57.19:0,57,912	0/0:40,0:40:96.25:0,96,1460	0/0:9,0:9:27.07:0,27,417	0/0:15,0:15:45.14:0,45,697	0/0:29,0:29:63.16:0,63,935	0/0:16,0:16:48.16:0,48,776	0/0:37,0:36:84.26:0,84,1326	0/0:32,0:32:78.25:0,78,1238	0/0:10,0:10:24.05:0,24,366
chr10	92323708	.	TGTA	T	94.21	PASS	AB=0.814;AC=3;AF=0.054;AN=56;BaseQRankSum=3.965;DP=448;FS=5.004;HRun=0;HaplotypeScore=88.8396;InbreedingCoeff=-0.0571;MQ=57.58;MQ0=7;MQRankSum=-3.556;QD=2.42;ReadPosRankSum=1.473;VQSLOD=1.4947;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:68.72:0,69,1484	0/0:7,0:7:18.06:0,18,401	0/0:16,0:11:32.14:0,32,666	0/0:8,0:7:20.86:0,21,385	0/0:21,0:21:63.22:0,63,1443	0/1:12,8:20:99:132,0,708	0/1:9,1:10:42.72:43,0,464	0/0:19,0:19:57.20:0,57,1333	0/0:15,0:14:42.14:0,42,967	0/0:15,0:15:45.11:0,45,988	0/0:14,0:13:36.12:0,36,816	0/0:17,0:15:42.13:0,42,911	0/0:16,0:16:48.16:0,48,1105	0/0:13,0:13:30.10:0,30,697	0/0:19,0:17:45.13:0,45,946	0/1:7,2:7:18.57:19,0,383	0/0:16,0:16:48.16:0,48,1087	0/0:14,0:13:30.10:0,30,679	0/0:17,0:17:51.18:0,51,1180	0/0:25,0:25:72.20:0,72,1503	0/0:12,0:12:36.12:0,36,825	0/0:9,0:9:21.07:0,21,454	0/0:14,0:13:24.06:0,24,517	0/0:21,0:21:44.92:0,45,1032	0/0:13,0:13:38.59:0,39,746	0/0:22,0:22:63.21:0,63,1395	0/0:30,0:28:84.27:0,84,1935	0/0:11,0:10:27.05:0,27,519
chr10	92323728	.	AGTGTGTGTGTGT	A	2514.46	PASS	AB=0.738;AC=21;AF=0.404;AN=52;BaseQRankSum=6.069;DP=442;FS=0.801;HRun=0;HaplotypeScore=133.5459;InbreedingCoeff=0.4405;MQ=48.60;MQ0=18;MQRankSum=-5.760;QD=11.08;ReadPosRankSum=0.257;VQSLOD=1.8208;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:22:30.57:0,31,849	0/0:3,0:5:0.98:0,1,21	./.	./.	0/0:15,0:24:30.51:0,31,364	0/0:13,0:13:15.05:0,15,762	0/0:12,0:11:21.07:0,21,954	0/0:20,0:22:23.97:0,24,237	0/0:15,0:17:22:0,22,313	1/1:12,6:18:11.78:226,12,0	1/1:8,3:10:3.01:104,3,0	1/1:13,7:18:8.24:214,8,0	1/1:14,7:22:14.63:430,15,0	1/1:4,10:14:6.02:207,6,0	0/1:9,0:16:1.22:1,0,31	0/0:9,0:10:12.51:0,13,520	0/0:13,0:13:5.03:0,5,30	0/1:7,11:18:53.04:368,0,53	0/0:12,0:14:15.05:0,15,215	0/0:15,0:16:15.27:0,15,200	0/0:10,0:10:6.49:0,6,201	1/1:4,4:7:3.01:104,3,0	1/1:5,11:15:17.94:372,18,0	0/1:12,11:24:9.85:279,0,10	1/1:6,5:13:9.03:291,9,0	0/1:13,1:16:82.66:83,0,192	0/1:24,0:24:10.58:11,0,404	0/0:6,0:5:3.01:0,3,57
chr10	92324095	.	TGG	T	6001.31	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-9.515;DP=599;FS=0.347;HRun=10;HaplotypeScore=95.7764;InbreedingCoeff=0.9611;MQ=66.56;MQ0=2;MQRankSum=0.453;QD=26.79;ReadPosRankSum=1.058;VQSLOD=4.8774;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:54.17:0,54,833	1/1:1,7:8:15.03:167,15,0	0/0:26,0:18:32.79:0,33,419	0/0:19,0:12:3.41:0,3,196	1/1:5,22:27:63.15:701,63,0	0/0:15,0:15:36.58:0,37,550	0/0:17,0:20:35.09:0,35,493	0/0:8,0:27:44.40:0,44,162	1/1:1,19:20:57.15:635,57,0	0/0:12,0:31:53.08:0,53,200	0/0:7,0:18:29.49:0,29,113	0/0:4,1:29:47.91:0,48,178	0/0:3,0:17:34.75:0,35,131	0/0:2,0:16:13.40:0,13,83	1/1:1,22:23:51.14:569,51,0	0/0:26,0:26:60.20:0,60,952	1/1:2,28:30:78.21:870,78,0	0/0:4,0:30:59.89:0,60,206	1/1:2,16:17:45.10:491,45,0	1/1:1,9:11:29.82:313,30,0	1/1:5,32:37:84.21:937,84,0	0/0:4,0:23:45.88:0,46,160	0/0:4,0:23:40.05:0,40,142	0/0:3,0:21:42.52:0,43,147	0/0:2,0:9:17.22:0,17,59	1/1:4,19:24:51.04:617,51,0	1/1:1,20:21:54.13:602,54,0	1/1:0,5:5:9.02:100,9,0
chr10	92324874	.	C	CAT	1429.71	PASS	AB=0.881;AC=12;AF=0.214;AN=56;BaseQRankSum=0.603;DP=654;FS=41.951;HRun=0;HaplotypeScore=127.4606;InbreedingCoeff=-0.2858;MQ=43.96;MQ0=87;MQRankSum=0.857;QD=4.81;ReadPosRankSum=3.381;VQSLOD=1.5203;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:23:23.92:0,24,187	0/0:6,0:6:8.07:0,8,36	0/0:12,0:4:8.90:0,9,61	0/0:14,0:2:2.99:0,3,24	0/0:15,0:14:8.22:0,8,36	0/0:17,0:16:29.87:0,30,243	0/0:29,0:25:32.66:0,33,256	0/0:13,0:11:29.66:0,30,208	0/0:35,0:30:10.48:0,10,42	0/1:25,2:17:51.42:310,0,51	0/1:20,2:15:8.76:32,0,9	0/1:24,3:25:25.63:26,0,66	0/1:25,6:26:64.94:65,0,118	0/1:22,3:22:45.40:223,0,45	0/0:19,0:18:2.22:0,2,7	0/0:22,0:18:28.81:0,29,224	0/1:21,0:16:4.95:5,0,49	0/1:21,3:19:63.51:179,0,64	0/1:19,0:14:14.29:14,0,71	0/0:17,0:13:14.78:0,15,117	0/0:66,0:58:11.43:0,11,202	0/1:13,8:19:77.12:100,0,77	0/1:15,5:15:22.45:226,0,22	0/1:29,4:31:65.98:324,0,66	0/1:20,5:20:57.02:71,0,57	0/0:27,1:24:8.30:0,8,239	0/0:24,0:21:0.38:0,0,85	0/0:11,0:7:16.54:0,17,89
chr10	92324878	.	C	CAT	46	PASS	AB=0.886;AC=7;AF=0.125;AN=56;BaseQRankSum=5.245;DP=668;FS=19.905;HRun=0;HaplotypeScore=137.5882;InbreedingCoeff=0.2727;MQ=44.67;MQ0=85;MQRankSum=-0.507;QD=0.49;ReadPosRankSum=5.959;VQSLOD=1.1548;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:24:26.92:0,27,212	1/1:8,0:8:8.90:62,9,0	0/0:16,0:4:11.85:0,12,84	0/0:18,0:4:8.19:0,8,53	0/0:15,0:14:8.79:0,9,52	0/0:16,0:15:26.66:0,27,220	0/0:28,0:24:32.66:0,33,254	0/0:14,0:12:32.64:0,33,233	0/0:36,0:31:10.51:0,11,80	0/0:29,0:19:17.95:0,18,213	0/0:22,0:15:0.76:0,1,9	0/0:28,0:26:15.16:0,15,94	0/0:30,0:25:23.02:0,23,157	0/0:25,0:22:14.88:0,15,201	1/1:20,0:19:3:25,3,0	0/0:25,0:21:28.89:0,29,218	0/1:11,12:18:41.67:42,0,55	0/1:22,0:17:28.49:28,0,68	0/0:22,0:17:40.02:0,40,316	0/0:17,0:14:11.93:0,12,98	0/0:67,0:59:33.34:0,33,315	0/0:20,0:17:4.65:0,5,129	0/1:20,0:15:13:13,0,51	0/0:32,0:30:3.74:0,4,224	0/0:23,0:18:5.46:0,5,64	0/0:26,0:23:38.12:0,38,420	0/0:25,0:22:12.59:0,13,93	0/0:11,0:7:18.38:0,18,108
chr10	92324885	.	ACACACACACG	A	3661.13	PASS	AB=0.971;AC=33;AF=0.589;AN=56;BaseQRankSum=1.617;DP=676;FS=2.950;HRun=0;HaplotypeScore=170.6796;InbreedingCoeff=0.0919;MQ=46.66;MQ0=75;MQRankSum=4.065;QD=6.79;ReadPosRankSum=4.470;VQSLOD=2.6965;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:25:12.05:0,12,256	1/1:9,0:9:5.98:44,6,0	0/0:20,0:6:17.17:0,17,115	0/1:24,0:8:19.29:19,0,28	1/1:15,0:15:9.02:95,9,0	0/0:16,0:15:26.70:0,27,280	0/0:28,0:25:17.04:0,17,329	0/0:18,0:17:45.43:0,45,362	1/1:34,0:30:1.26:75,1,0	1/1:30,0:21:29.69:550,30,0	0/1:10,9:13:6.01:43,0,6	0/1:28,0:26:14.70:63,0,15	1/1:26,0:22:2.90:145,3,0	1/1:26,0:22:2.76:432,3,0	1/1:19,0:18:0.47:1,0,0	0/0:25,0:22:32.68:0,33,292	0/1:23,0:18:26.73:51,0,27	0/1:20,0:17:15.22:15,0,38	0/1:24,0:19:21.88:200,0,22	0/1:19,0:16:4.08:29,0,4	0/1:72,0:63:84.11:376,0,84	1/1:19,0:16:7.48:182,7,0	0/1:22,0:18:15.60:206,0,16	1/1:31,0:29:51.95:698,52,0	0/1:21,0:17:7.57:8,0,14	1/1:27,0:24:3.56:314,4,0	0/1:20,0:18:23.62:24,0,29	1/1:11,0:7:12.01:91,12,0
chr10	92324893	.	ACG	A	1835.71	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=2.282;DP=695;FS=1.438;HRun=0;HaplotypeScore=133.9297;InbreedingCoeff=0.1345;MQ=52.41;MQ0=59;MQRankSum=1.367;QD=3.54;ReadPosRankSum=0.465;VQSLOD=2.9453;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:27:20.90:0,21,221	1/1:10,0:10:14.89:112,15,0	0/0:27,0:12:8.15:0,8,161	0/1:33,0:17:45.18:45,0,81	0/0:19,0:19:8.62:0,9,46	0/0:15,0:14:8.57:0,9,187	0/0:25,0:23:22.91:0,23,327	0/0:22,0:22:57.89:0,58,397	0/1:35,0:31:13.45:13,0,26	1/1:28,0:21:17.17:301,17,0	0/1:18,0:13:2.01:24,0,2	0/1:26,0:24:1.52:30,0,2	1/1:26,0:22:5.31:83,5,0	1/1:25,0:22:26.68:258,27,0	1/1:0,22:22:3:25,3,0	0/0:19,0:19:32.31:0,32,243	0/1:23,0:20:2.13:86,0,2	1/1:20,0:17:2.33:57,2,0	0/1:25,0:20:62.52:153,0,63	0/0:19,0:16:4.49:0,4,16	0/1:73,0:66:29.67:30,0,149	1/1:18,1:16:20.72:145,21,0	0/1:19,0:16:14.92:108,0,15	1/1:28,4:30:54.02:399,54,0	0/1:21,0:18:6.51:7,0,40	0/1:27,0:24:70.93:71,0,144	0/1:25,0:24:13.07:13,0,36	0/1:11,0:7:13.98:53,0,14
chr10	92324895	.	G	GCA	5375.77	PASS	AB=0.667;AC=36;AF=0.667;AN=54;BaseQRankSum=2.019;DP=686;FS=6.717;HRun=0;HaplotypeScore=126.7320;InbreedingCoeff=0.5191;MQ=54.46;MQ0=50;MQRankSum=-0.396;QD=10.95;ReadPosRankSum=4.049;VQSLOD=3.9779;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:28:32.82:0,33,375	1/1:10,0:10:1.55:4,2,0	0/0:29,0:14:34.70:0,35,344	0/0:34,0:18:35.56:0,36,386	1/1:3,18:21:9.03:150,9,0	0/0:15,0:14:30.09:0,30,365	0/0:23,0:21:39.10:0,39,466	0/0:22,0:22:48.10:0,48,579	1/1:10,22:28:8.31:107,8,0	1/1:12,16:23:51.12:732,51,0	1/1:14,2:13:3.48:35,3,0	1/1:8,15:23:2.95:46,3,0	1/1:8,16:21:11.84:138,12,0	1/1:19,3:21:42.14:637,42,0	./.	0/0:19,0:19:33.07:0,33,391	1/1:26,0:23:7.84:74,8,0	1/1:9,10:16:7.20:89,7,0	1/1:10,15:21:23.76:456,24,0	1/1:8,11:17:3.01:50,3,0	0/1:27,43:65:99:414,0,111	1/1:16,0:15:18.06:278,18,0	0/1:14,4:16:13.66:310,0,14	1/1:28,4:30:66.19:979,66,0	0/1:11,10:20:10.50:44,0,10	1/1:9,16:23:16.05:715,16,0	0/1:7,20:25:29.09:64,0,29	1/1:8,1:5:4.26:53,4,0
chr10	92325078	.	AAAAC	A	4892.47	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=5.958;DP=649;FS=2.546;HRun=0;HaplotypeScore=123.5347;InbreedingCoeff=0.9492;MQ=62.44;MQ0=0;MQRankSum=4.140;QD=25.35;ReadPosRankSum=3.340;VQSLOD=4.5259;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:60.21:0,60,1441	0/0:9,0:12:12.04:0,12,210	./.	0/0:26,0:25:30.06:0,30,632	1/1:8,15:23:42.14:673,42,0	0/0:14,0:20:48.09:0,48,601	0/0:13,0:16:24.06:0,24,425	0/0:28,0:36:51.17:0,51,985	1/1:12,8:20:24.08:384,24,0	0/0:29,0:29:54.19:0,54,1272	0/0:21,0:21:33.11:0,33,772	0/0:23,0:23:36.08:0,36,807	0/0:21,0:21:36.12:0,36,839	0/0:17,0:17:36.12:0,36,864	0/0:11,0:28:42.14:0,42,738	0/0:19,0:33:57.18:0,57,986	0/0:13,0:32:57.20:0,57,1022	0/0:20,0:19:27.09:0,27,649	1/1:11,12:23:36.05:522,36,0	1/1:15,14:29:39.13:624,39,0	1/1:11,14:25:39.13:625,39,0	0/0:13,0:13:24.08:0,24,565	0/0:21,0:21:42.14:0,42,960	0/0:19,0:18:33.11:0,33,792	0/0:24,0:24:42.14:0,42,1003	1/1:10,23:33:0.25:958,0,0	1/1:9,16:25:39.13:625,39,0	1/1:2,13:15:30.10:481,30,0
chr10	92325355	.	GTTTTC	G	1415.72	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.892;DP=637;FS=2.423;HRun=0;HaplotypeScore=119.3198;InbreedingCoeff=0.9164;MQ=74.41;MQ0=6;MQRankSum=-0.712;QD=24.00;ReadPosRankSum=1.083;VQSLOD=3.5836;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:84.24:0,84,2265	1/1:11,6:17:8.57:170,9,0	0/0:25,0:16:8.32:0,8,193	0/0:36,0:19:6.29:0,6,435	0/0:25,0:25:54.17:0,54,1466	0/0:24,0:24:54.17:0,54,849	0/0:18,0:18:45.15:0,45,771	0/0:46,0:46:76.43:0,76,1183	0/0:16,0:16:39.13:0,39,1018	0/0:24,0:24:66.22:0,66,1809	0/0:26,0:26:62.80:0,63,1655	0/0:18,0:18:54.14:0,54,1344	0/0:16,0:16:30.10:0,30,838	0/0:17,0:17:48.15:0,48,1269	1/1:4,15:19:42.04:756,42,0	0/0:16,0:16:30.10:0,30,485	1/1:10,13:23:33.11:626,33,0	0/0:26,0:26:60.14:0,60,1548	0/0:17,0:17:33.09:0,33,776	0/0:29,0:29:66.23:0,66,1822	0/0:14,0:14:33.04:0,33,806	0/0:11,0:11:27.08:0,27,687	0/0:13,0:12:18.05:0,18,511	0/0:19,0:19:48.15:0,48,1283	0/0:24,0:24:60.12:0,60,1354	0/0:27,0:27:69.21:0,69,1729	0/0:42,0:42:99:0,102,2734	0/0:15,0:15:33.11:0,33,938
chr10	92325375	.	CT	C	2008.91	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.787;DP=623;FS=6.511;HRun=9;HaplotypeScore=68.6751;InbreedingCoeff=0.9183;MQ=63.87;MQ0=7;MQRankSum=-0.277;QD=18.95;ReadPosRankSum=-1.518;VQSLOD=3.2981;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.23:0,78,900	0/0:8,0:8:5.95:0,6,69	0/0:23,0:12:10.83:0,11,189	0/0:36,0:16:26.14:0,26,221	0/0:20,0:20:57.17:0,57,658	1/1:1,30:31:75.04:686,75,0	1/1:3,18:21:39.01:357,39,0	1/1:11,27:38:81:741,81,0	0/0:17,0:18:50.98:0,51,563	0/0:24,0:24:66.20:0,66,762	0/0:24,0:24:63.18:0,63,717	0/0:23,0:23:60.18:0,60,692	0/0:15,0:15:42.12:0,42,485	0/0:19,0:19:50.50:0,51,551	0/0:22,0:22:20.68:0,21,229	1/1:0,16:16:42.02:384,42,0	0/0:19,0:19:17.76:0,18,207	0/0:27,1:28:47.86:0,48,803	0/0:16,0:15:39.09:0,39,432	0/0:30,0:30:78.22:0,78,890	0/0:14,0:14:33.10:0,33,381	0/0:10,0:10:4.01:0,4,254	0/0:12,0:11:27.07:0,27,303	0/0:20,0:20:54.14:0,54,611	0/0:21,1:22:32.71:0,33,630	0/0:25,0:25:66.19:0,66,753	0/0:44,0:44:99:0,120,1376	0/0:15,0:15:45.07:0,45,479
chr10	92326201	.	TG	T	3626.81	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.675;DP=704;FS=0.000;HRun=3;HaplotypeScore=68.0210;InbreedingCoeff=0.9950;MQ=88.35;MQ0=0;MQRankSum=-3.069;QD=34.54;ReadPosRankSum=0.717;VQSLOD=4.0906;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,1838	0/0:9,0:9:24.08:0,24,345	0/0:29,0:29:67.42:0,67,1148	0/0:23,0:23:60.20:0,60,849	0/0:27,0:27:81.26:0,81,1145	1/1:1,14:15:42.13:518,42,0	1/1:1,36:37:99:1302,105,0	1/1:0,25:25:72.16:840,72,0	0/0:20,0:20:60.20:0,60,864	0/0:27,0:27:75.25:0,75,1064	0/0:19,0:19:48.16:0,48,691	0/0:23,0:23:69.23:0,69,993	0/0:22,0:22:66.20:0,66,914	0/0:25,0:25:72.24:0,72,1037	0/0:36,0:36:99:0,108,1536	1/1:0,28:28:78.25:967,78,0	0/0:44,0:44:99:0,129,1856	0/0:22,0:22:63.21:0,63,905	0/0:19,0:19:54.17:0,54,754	0/0:22,0:22:57.19:0,57,821	0/0:28,0:28:75.24:0,75,1061	0/0:13,0:13:39.11:0,39,525	0/0:26,0:26:75.23:0,75,1044	0/0:36,0:36:99:0,99,1422	0/0:15,0:15:45.15:0,45,648	0/0:27,0:27:81.27:0,81,1157	0/0:35,0:35:99:0,104,1472	0/0:5,0:5:15.05:0,15,216
chr10	92326920	.	AATT	A	436.92	PASS	AB=0.912;AC=12;AF=0.214;AN=56;BaseQRankSum=8.772;DP=496;FS=16.652;HRun=0;HaplotypeScore=92.1740;InbreedingCoeff=-0.1918;MQ=59.67;MQ0=25;MQRankSum=-8.041;QD=2.39;ReadPosRankSum=0.441;VQSLOD=0.5952;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:37:27.29:0,27,1312	0/0:8,0:7:7.11:0,7,394	0/0:24,0:10:17.51:0,18,216	0/0:15,0:4:8.26:0,8,145	0/0:29,0:27:7.27:0,7,991	0/1:18,4:20:61.60:62,0,641	0/0:4,0:3:6.02:0,6,136	0/0:20,0:14:42.10:0,42,827	0/1:9,1:10:27.81:28,0,369	0/0:20,1:20:11.24:0,11,1113	0/1:14,1:14:12.71:13,0,697	0/1:9,0:7:15.76:16,0,116	0/0:7,0:7:9.03:0,9,202	0/0:6,0:6:9.03:0,9,204	0/1:11,4:12:73.66:74,0,383	0/1:14,0:13:33.32:33,0,426	0/1:31,0:31:22.30:22,0,1148	0/0:27,0:25:53.90:0,54,1109	0/0:26,2:24:14.33:0,14,1213	0/0:17,1:18:5.21:0,5,919	0/1:14,1:14:15.75:16,0,614	1/1:3,0:1:1.25:3,1,0	0/0:15,0:13:22.25:0,22,715	0/0:10,0:8:18.06:0,18,407	0/1:16,3:18:99:101,0,755	0/0:18,0:18:54.14:0,54,1153	0/0:23,1:23:17.33:0,17,1263	0/1:24,6:27:99:212,0,1299
chr10	92327013	.	C	CA	1116.46	PASS	AB=0.790;AC=19;AF=0.339;AN=56;BaseQRankSum=-5.500;DP=517;FS=4.174;HRun=15;HaplotypeScore=75.7670;InbreedingCoeff=0.4620;MQ=53.90;MQ0=45;MQRankSum=-0.307;QD=5.42;ReadPosRankSum=-1.303;VQSLOD=2.3530;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:29.19:0,29,247	0/0:1,0:5:9.97:0,10,28	0/1:34,0:6:4.76:5,0,6	0/0:33,0:15:1.77:0,2,35	0/0:21,0:21:34.36:0,34,203	0/0:9,0:9:6.97:0,7,20	0/0:6,0:7:9.41:0,9,25	0/0:29,2:26:11.36:0,11,215	0/0:9,0:11:13.71:0,14,78	1/1:15,7:21:17.27:217,17,0	1/1:5,13:17:38.70:305,39,0	1/1:10,8:14:6.27:145,6,0	0/1:4,4:6:9.10:34,0,9	1/1:6,6:10:0.57:62,1,0	0/0:4,0:15:25.30:0,25,71	0/0:6,0:10:13.47:0,13,37	0/0:6,0:17:25.09:0,25,70	0/1:12,14:21:24.64:177,0,25	0/1:16,2:16:22.76:23,0,89	0/0:22,2:25:8.58:0,9,150	0/0:15,0:10:20.90:0,21,117	1/1:4,6:8:14.98:126,15,0	1/1:4,3:5:8.99:76,9,0	1/1:4,4:7:3:25,3,0	0/1:13,3:19:27.33:102,0,27	0/0:16,1:17:12.08:0,12,177	0/0:16,0:16:32.37:0,32,172	0/0:19,0:15:28.45:0,28,167
chr10	92327025	.	A	ATT	242.16	PASS	AB=0.939;AC=9;AF=0.161;AN=56;BaseQRankSum=9.331;DP=546;FS=16.337;HRun=0;HaplotypeScore=84.5293;InbreedingCoeff=0.2516;MQ=61.34;MQ0=36;MQRankSum=-0.745;QD=1.89;ReadPosRankSum=3.220;VQSLOD=0.3114;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:41:87.25:0,87,1248	1/1:5,0:5:6.84:20,7,0	0/1:52,0:10:40.62:43,0,41	0/0:49,0:22:5.58:0,6,233	0/0:19,0:19:48.10:0,48,716	0/1:9,1:7:11.66:29,0,12	1/1:4,5:9:6.84:121,7,0	0/0:38,0:36:99:0,105,1290	0/0:10,0:10:21.06:0,21,303	0/0:24,0:23:67.51:0,68,850	0/0:19,0:18:48.07:0,48,621	0/0:13,0:11:30.10:0,30,408	0/0:10,0:8:12.04:0,12,165	0/0:13,0:12:27.09:0,27,386	0/1:18,0:16:66.33:66,0,78	0/1:8,3:11:47.38:75,0,47	0/1:23,0:22:29.04:29,0,48	0/0:23,0:18:39.08:0,39,519	0/0:24,0:21:51.15:0,51,724	0/0:17,0:16:45.14:0,45,670	0/0:15,0:13:36.09:0,36,518	0/0:9,0:9:21.07:0,21,276	0/0:7,0:6:18.05:0,18,224	0/0:8,0:8:7.57:0,8,85	0/0:18,0:18:42.03:0,42,545	0/0:18,0:18:54.18:0,54,822	0/0:19,0:17:48.14:0,48,683	0/0:21,0:16:36.09:0,36,517
chr10	92327027	.	AATT	A	514.88	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=9.635;DP=552;FS=8.612;HRun=0;HaplotypeScore=90.7973;InbreedingCoeff=0.8100;MQ=61.69;MQ0=35;MQRankSum=-2.938;QD=3.99;ReadPosRankSum=3.563;VQSLOD=1.0624;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:41:87.48:0,87,1299	1/1:5,0:5:14.31:75,14,0	0/1:52,0:10:15.95:16,0,48	0/0:50,0:22:31.40:0,31,412	0/0:18,0:18:48.16:0,48,792	1/1:8,1:6:2.07:51,2,0	1/1:4,5:9:14.44:169,14,0	0/0:39,0:37:99:0,100,814	0/0:12,0:12:23.89:0,24,369	0/0:24,0:23:43.86:0,44,808	0/0:20,0:19:54.12:0,54,743	0/0:13,0:11:25.04:0,25,300	0/0:10,0:8:11.95:0,12,146	0/0:14,0:13:30.09:0,30,402	1/1:18,0:16:7.74:127,8,0	1/1:10,3:13:11.93:122,12,0	1/1:23,0:22:25.57:130,26,0	0/0:23,0:18:39.13:0,39,589	0/0:23,0:21:50.83:0,51,695	0/0:17,0:16:44.17:0,44,699	0/0:15,0:13:35.79:0,36,546	0/0:9,0:9:20.95:0,21,285	0/0:7,0:6:14.85:0,15,184	0/0:8,0:8:9.40:0,9,156	0/0:18,0:18:44.95:0,45,654	0/0:18,0:18:54.17:0,54,864	0/0:19,0:17:51.04:0,51,697	0/0:22,0:18:51.16:0,51,823
chr10	92327028	.	ATT	A	667.98	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=9.660;DP=547;FS=3.662;HRun=2;HaplotypeScore=82.1344;InbreedingCoeff=0.8158;MQ=62.18;MQ0=33;MQRankSum=-1.688;QD=5.22;ReadPosRankSum=3.772;VQSLOD=-0.1364;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:41:87.46:0,87,1169	1/1:5,0:5:14.96:126,15,0	0/1:52,0:10:21.12:21,0,26	0/0:50,0:22:31.77:0,32,394	0/0:18,0:18:48.16:0,48,708	1/1:8,1:6:2.15:44,2,0	1/1:9,0:9:15.78:155,16,0	0/0:39,0:38:88.06:0,88,637	0/0:11,0:11:24.08:0,24,335	0/0:24,0:23:49.50:0,50,788	0/0:20,0:19:56.47:0,56,641	0/0:13,0:11:25.07:0,25,234	0/0:10,0:8:11.88:0,12,114	0/0:14,0:13:30.03:0,30,357	1/1:18,0:16:9.38:180,9,0	1/1:8,5:13:12.19:113,12,0	1/1:22,0:21:29.43:205,29,0	0/0:22,0:18:39.09:0,39,452	0/0:24,0:22:53.65:0,54,672	0/0:18,0:17:47.19:0,47,664	0/0:15,0:13:35.79:0,36,475	0/0:8,0:8:21:0,21,230	0/0:6,0:5:14.95:0,15,152	0/0:8,0:8:9.34:0,9,145	0/0:17,0:17:45.03:0,45,548	0/0:18,0:18:54.17:0,54,760	0/0:19,0:17:48.57:0,49,612	0/0:21,0:18:51.17:0,51,752
chr10	92327030	.	T	TA	1905.66	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=3.201;DP=552;FS=10.170;HRun=9;HaplotypeScore=71.6877;InbreedingCoeff=0.8837;MQ=63.30;MQ0=31;MQRankSum=-1.664;QD=11.34;ReadPosRankSum=-0.637;VQSLOD=1.8311;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:41:83.80:0,84,708	1/1:0,5:5:15.02:142,15,0	0/1:52,0:10:1.45:1,0,28	0/0:51,0:23:8.93:0,9,188	0/0:18,0:18:41.99:0,42,364	1/1:9,0:6:8.61:46,9,0	1/1:8,0:10:20.36:117,20,0	1/1:10,30:39:76:989,76,0	0/0:11,0:11:23.80:0,24,183	0/0:23,0:22:42.81:0,43,349	0/0:20,0:19:49.78:0,50,396	0/0:13,0:11:17.22:0,17,109	0/0:10,0:8:5.03:0,5,32	0/0:13,0:13:20.25:0,20,160	1/1:7,10:16:32.33:348,32,0	1/1:12,1:13:17.41:112,17,0	1/1:5,16:21:36.50:343,36,0	0/0:21,0:17:27.37:0,27,237	0/0:24,0:22:14.67:0,15,330	0/0:18,0:17:41.96:0,42,358	0/0:15,0:14:27.30:0,27,220	0/0:9,0:9:17.63:0,18,153	0/0:6,0:5:13.99:0,14,99	0/0:9,0:9:14.92:0,15,116	0/0:17,0:17:24.89:0,25,254	0/0:20,0:20:44.85:0,45,372	0/0:21,0:19:38.82:0,39,323	0/0:21,0:18:47.99:0,48,416
chr10	92329803	.	C	CTCTCCTCCTCTCCAG	42446.03	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-2.962;DP=428;FS=49.821;HRun=0;HaplotypeScore=176.7622;InbreedingCoeff=0.9513;MQ=66.92;MQ0=0;MQRankSum=-10.699;QD=121.27;ReadPosRankSum=3.972;VQSLOD=3.0360;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:70.48:0,70,2850	1/1:11,2:13:36.12:2096,36,0	0/0:17,0:15:36.08:0,36,823	0/0:28,0:25:62.66:0,63,1888	1/1:13,0:13:14.86:1084,15,0	1/1:12,4:15:39.13:2239,39,0	1/1:14,1:14:36.11:1624,36,0	1/1:30,0:27:51.17:2577,51,0	1/1:5,4:10:18.06:1117,18,0	1/1:18,2:21:54.18:2845,54,0	1/1:15,0:15:11.63:690,12,0	1/1:8,6:14:36.12:2361,36,0	1/1:6,5:12:26.23:1847,26,0	1/1:7,2:9:12.04:711,12,0	1/1:3,8:11:30.10:2012,30,0	1/1:5,6:11:33.11:2122,33,0	1/1:13,6:20:36.12:2172,36,0	1/1:5,8:13:30.10:1945,30,0	1/1:10,2:12:30.10:1620,30,0	1/1:11,1:12:24.08:1626,24,0	1/1:14,3:18:29.91:1832,30,0	1/1:7,0:7:21.07:1359,21,0	1/1:7,0:7:15.52:928,16,0	1/1:15,5:20:15.05:915,15,0	1/1:11,0:11:21.03:1041,21,0	1/1:15,0:14:33.11:1908,33,0	1/1:7,8:15:36.12:2479,36,0	1/1:8,1:10:18.06:1296,18,0
chr10	92329860	.	CT	C	513.68	PASS	AB=0.889;AC=12;AF=0.214;AN=56;BaseQRankSum=5.704;DP=443;FS=1.134;HRun=14;HaplotypeScore=69.3316;InbreedingCoeff=0.5199;MQ=67.48;MQ0=1;MQRankSum=1.695;QD=3.49;ReadPosRankSum=0.176;VQSLOD=0.2768;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,1:37:37.37:0,37,574	0/0:13,0:13:27.03:0,27,251	0/1:33,0:13:5.23:13,0,5	0/0:18,0:12:7.18:0,7,54	0/0:15,0:15:38.95:0,39,343	1/1:5,0:21:32.56:94,33,0	1/1:4,0:7:8.13:23,8,0	1/1:8,23:32:70.33:475,70,0	0/1:4,2:6:18.94:32,0,19	0/1:14,2:17:11.18:11,0,179	0/0:16,0:16:38.95:0,39,345	0/0:7,0:7:18.02:0,18,167	0/0:11,0:12:29.80:0,30,251	0/0:4,0:4:9.01:0,9,84	0/0:5,0:5:6.01:0,6,56	1/1:2,0:7:8.14:24,8,0	0/1:19,2:20:2.22:2,0,243	0/0:14,1:15:15.48:0,15,286	0/0:25,1:30:38.28:0,38,485	0/0:14,0:15:33.01:0,33,297	0/0:6,0:6:6.01:0,6,56	0/0:7,0:7:9.01:0,9,84	0/0:11,0:11:11.85:0,12,86	0/0:6,0:6:12.01:0,12,112	0/0:19,1:20:33.24:0,33,419	0/0:15,1:16:6.28:0,6,189	0/0:18,0:19:41.16:0,41,397	0/0:22,0:22:50.95:0,51,451
chr10	92330822	.	ACACTGGAAC	A	4155.87	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.055;DP=588;FS=0.585;HRun=0;HaplotypeScore=161.2411;InbreedingCoeff=0.9881;MQ=74.99;MQ0=0;MQRankSum=-10.803;QD=84.81;ReadPosRankSum=2.301;VQSLOD=3.6888;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,172,8163	1/1:0,5:5:15.05:488,15,0	0/0:17,0:17:50.96:0,51,2228	0/0:19,0:19:57.11:0,57,2229	0/0:19,0:19:54.19:0,54,2707	0/0:17,0:17:48.16:0,48,2326	0/0:29,0:29:87.30:0,87,4238	0/0:21,0:21:63.22:0,63,2921	0/0:18,0:18:51.18:0,51,2525	0/0:24,0:24:72.24:0,72,3366	0/0:13,0:13:39.13:0,39,1711	0/0:19,0:19:57.18:0,57,2638	0/0:15,0:15:45.14:0,45,2122	0/0:30,0:30:90.30:0,90,4406	1/1:0,25:25:69.24:2245,69,0	0/0:25,0:25:75.24:0,75,3650	1/1:0,19:19:45.15:1422,45,0	0/0:23,0:23:69.24:0,69,3383	0/0:20,0:20:60.21:0,60,2811	0/0:12,0:12:36.11:0,36,1517	0/0:47,0:47:99:0,141,6916	0/0:24,0:24:72.23:0,72,3372	0/0:11,0:11:33.10:0,33,1425	0/0:27,0:27:81.28:0,81,3847	0/0:9,0:9:27.09:0,27,1260	0/0:20,0:20:60.18:0,60,2660	0/0:18,0:18:54.17:0,54,2595	0/0:5,0:5:15.05:0,15,754
chr10	92331346	.	C	CA	1433.81	PASS	AB=0.857;AC=41;AF=0.732;AN=56;BaseQRankSum=2.803;DP=558;FS=5.065;HRun=16;HaplotypeScore=90.8555;InbreedingCoeff=-0.0768;MQ=62.30;MQ0=20;MQRankSum=-1.745;QD=2.81;ReadPosRankSum=-2.030;VQSLOD=-0.0782;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,1:46:39.38:0,39,333	1/1:9,0:9:5.72:31,6,0	0/1:58,0:24:15.29:15,0,21	0/1:47,1:21:16.65:17,0,22	0/1:7,10:20:18.22:172,0,18	1/1:23,0:22:0.47:2,0,0	0/1:17,0:17:1.77:35,0,2	1/1:22,0:20:11.51:56,12,0	0/1:6,0:6:1.81:78,0,2	1/1:27,0:23:22.66:102,23,0	0/1:21,0:21:1.91:29,0,2	0/1:13,0:12:0.39:49,0,0	1/1:11,0:11:2.37:8,2,0	0/1:12,0:12:0:1,0,0	1/1:16,0:16:14.13:136,14,0	1/1:10,0:10:9.87:52,10,0	1/1:25,0:25:20.64:93,21,0	1/1:17,0:17:4.37:22,4,0	0/1:15,8:22:30.32:136,0,30	0/1:6,10:17:6.85:115,0,7	0/1:8,3:10:21.66:71,0,22	1/1:13,0:13:4.51:16,5,0	1/1:13,0:13:8.54:44,9,0	1/1:17,0:17:2.22:7,2,0	1/1:10,0:10:3.73:16,4,0	0/1:10,9:19:6.13:143,0,6	1/1:13,1:14:10.81:63,11,0	0/1:7,3:10:1.70:60,0,2
chr10	92331962	.	T	TAAACAAAC	14757.03	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.956;DP=516;FS=2.335;HRun=0;HaplotypeScore=143.9701;InbreedingCoeff=0.7525;MQ=65.39;MQ0=3;MQRankSum=-4.772;QD=34.32;ReadPosRankSum=-1.112;VQSLOD=4.5303;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:14.92:0,15,1806	1/1:7,0:8:6.02:214,6,0	0/0:26,0:24:1.25:0,1,411	0/0:24,0:24:11.63:0,12,259	1/1:15,10:26:25.90:731,26,0	1/1:7,11:18:39.13:1564,39,0	1/1:15,7:22:24.08:902,24,0	1/1:22,0:29:30:366,30,0	1/1:6,5:11:21.07:854,21,0	1/1:8,0:25:50.97:486,51,0	1/1:7,0:17:26.96:232,27,0	1/1:2,0:17:38.91:318,39,0	1/1:6,0:13:11.97:98,12,0	1/1:6,0:23:50.57:419,51,0	1/1:7,0:14:9.03:314,9,0	1/1:4,7:11:12.04:496,12,0	1/1:14,0:19:18.06:582,18,0	1/1:3,0:14:26.83:219,27,0	1/1:12,11:22:34.88:966,35,0	1/1:7,7:14:30.10:1221,30,0	1/1:8,4:12:6.02:242,6,0	1/1:3,0:7:11.98:100,12,0	1/1:5,0:8:9.01:94,9,0	1/1:8,0:25:38.91:318,39,0	1/1:3,0:19:44.90:367,45,0	1/1:16,9:24:42.14:1579,42,0	1/1:11,11:24:36.12:1473,36,0	1/1:2,4:6:15.05:604,15,0
chr10	92332121	.	T	TCACACACA	5578.29	PASS	AB=0.879;AC=42;AF=0.750;AN=56;BaseQRankSum=-7.107;DP=476;FS=9.861;HRun=0;HaplotypeScore=143.2866;InbreedingCoeff=0.5598;MQ=58.98;MQ0=6;MQRankSum=-0.162;QD=15.98;ReadPosRankSum=-0.325;VQSLOD=3.5810;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:36:4.13:0,4,353	1/1:7,0:6:3.01:50,3,0	1/1:16,0:13:0.47:1,0,0	0/0:26,0:13:3.01:0,3,73	0/1:17,0:25:1.75:235,0,2	0/0:9,0:19:27.09:0,27,518	0/0:8,0:12:12.02:0,12,204	0/0:14,0:20:6.02:0,6,88	1/1:5,0:11:11.93:91,12,0	1/1:10,6:19:36.09:952,36,0	1/1:17,5:25:5.90:189,6,0	1/1:4,7:12:9.03:365,9,0	1/1:11,1:11:14.81:295,15,0	1/1:11,2:15:14.88:353,15,0	1/1:12,0:12:15.01:221,15,0	0/0:6,0:12:12.04:0,12,223	0/1:24,0:24:37.30:144,0,37	1/1:11,1:12:11.90:283,12,0	1/1:10,0:8:15.02:166,15,0	1/1:8,0:23:11.08:167,11,0	1/1:14,0:19:1.43:82,1,0	1/1:9,0:10:2.95:122,3,0	1/1:6,6:15:8.91:369,9,0	1/1:11,12:23:18.06:739,18,0	1/1:10,2:12:6.02:247,6,0	1/1:10,0:17:20.93:198,21,0	1/1:8,0:19:20.98:209,21,0	1/1:0,0:6:12:103,12,0
chr10	92332379	.	C	CT	678.65	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=4.167;DP=516;FS=0.000;HRun=5;HaplotypeScore=106.6177;InbreedingCoeff=0.7131;MQ=71.37;MQ0=1;MQRankSum=-1.835;QD=9.43;ReadPosRankSum=0.766;VQSLOD=0.5051;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:63.14:0,63,667	1/1:4,5:9:0.72:78,1,0	0/0:28,0:20:8.26:0,8,172	0/1:29,0:15:7.75:8,0,126	0/0:27,0:28:60.99:0,61,622	0/0:17,0:17:36.09:0,36,387	0/0:18,0:18:45.10:0,45,473	0/0:27,0:27:72.13:0,72,749	0/0:13,0:13:30.08:0,30,322	0/0:25,0:24:60.13:0,60,646	0/0:22,0:22:48.07:0,48,490	0/0:16,0:16:24.06:0,24,257	0/0:16,0:16:33.08:0,33,354	0/0:12,0:12:15.03:0,15,161	1/1:6,10:16:25.48:275,25,0	0/0:11,0:11:24.06:0,24,256	1/1:7,11:18:45.24:452,45,0	0/0:22,0:22:36.05:0,36,373	0/0:26,0:26:66.08:0,66,681	0/0:12,0:12:30.08:0,30,327	0/0:19,0:19:36.08:0,36,380	0/0:3,0:3:6.01:0,6,64	0/0:13,0:13:21.05:0,21,224	0/0:16,0:16:27.04:0,27,276	0/0:13,0:13:24.06:0,24,258	0/0:27,0:27:66.17:0,66,732	0/0:28,0:27:57.06:0,57,582	0/0:7,0:7:20.90:0,21,199
chr10	92332407	.	C	CTTTTT	8659.72	PASS	AB=0.970;AC=50;AF=0.893;AN=56;BaseQRankSum=-2.567;DP=474;FS=3.354;HRun=15;HaplotypeScore=98.0383;InbreedingCoeff=0.2868;MQ=71.36;MQ0=5;MQRankSum=-2.332;QD=20.28;ReadPosRankSum=0.910;VQSLOD=2.9880;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:25:2.33:2,0,362	1/1:5,0:5:3.01:61,3,0	0/0:46,0:20:3.14:0,3,47	0/1:38,0:18:11.28:38,0,11	1/1:23,1:24:33.47:582,33,0	1/1:16,0:16:30.09:356,30,0	1/1:19,0:19:36.05:406,36,0	1/1:20,0:21:29.98:368,30,0	1/1:7,0:7:6.02:129,6,0	1/1:19,0:18:21.03:367,21,0	1/1:19,0:17:27.09:522,27,0	1/1:17,0:17:24.08:522,24,0	1/1:17,0:17:18.06:391,18,0	1/1:8,0:8:3.48:64,3,0	1/1:12,0:11:9:147,9,0	1/1:12,0:13:24.06:278,24,0	1/1:16,0:16:18.06:378,18,0	0/1:16,0:16:7.76:214,0,8	1/1:19,0:18:21.28:402,21,0	1/1:11,1:12:18.06:339,18,0	1/1:6,0:6:6.02:120,6,0	0/1:3,0:2:0:0,0,0	1/1:11,1:12:18.04:316,18,0	1/1:13,1:14:21.07:453,21,0	1/1:8,1:9:18.06:386,18,0	1/1:26,2:28:49.64:941,50,0	1/1:21,0:20:33.11:684,33,0	1/1:5,0:4:9.03:191,9,0
chr10	92332415	.	T	TTTTTC	12078.74	PASS	AB=0.791;AC=48;AF=0.857;AN=56;BaseQRankSum=-4.339;DP=499;FS=2.172;HRun=0;HaplotypeScore=100.7855;InbreedingCoeff=0.3264;MQ=67.16;MQ0=8;MQRankSum=-2.264;QD=27.83;ReadPosRankSum=2.772;VQSLOD=4.8638;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:43.36:0,43,711	0/1:5,0:6:2.12:74,0,2	0/0:38,0:16:7.43:0,7,175	0/1:38,0:15:19.70:20,0,29	1/1:5,18:26:39.25:750,39,0	1/1:1,0:17:12.26:440,12,0	1/1:4,0:23:36.51:531,37,0	1/1:8,1:19:36.79:500,37,0	1/1:3,4:8:0.05:230,0,0	1/1:4,13:17:19.17:546,19,0	1/1:1,18:20:32.93:728,33,0	1/1:2,14:16:23.79:646,24,0	1/1:4,9:14:7.50:561,8,0	1/1:1,7:12:2.98:82,3,0	1/1:7,0:13:13.92:348,14,0	1/1:3,0:14:23.95:368,24,0	1/1:6,1:17:7.51:445,8,0	0/1:9,7:15:24.69:249,0,25	1/1:7,18:23:47.93:921,48,0	1/1:2,10:15:23.93:460,24,0	1/1:4,2:6:11.96:212,12,0	1/1:6,0:5:11.86:92,12,0	0/1:4,7:11:2.58:419,0,3	1/1:2,11:14:20.96:561,21,0	1/1:1,9:11:18.06:457,18,0	1/1:11,20:33:62.13:1372,62,0	1/1:6,19:25:21.94:842,22,0	1/1:1,3:4:8.97:224,9,0
chr10	92332669	.	TTTTC	T	1505.25	PASS	AB=0.615;AC=5;AF=0.089;AN=56;BaseQRankSum=9.473;DP=551;FS=0.000;HRun=0;HaplotypeScore=91.0606;InbreedingCoeff=0.7617;MQ=59.94;MQ0=5;MQRankSum=-2.927;QD=28.40;ReadPosRankSum=0.565;VQSLOD=2.9454;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,99,2322	0/1:3,5:8:55.31:204,0,55	0/0:24,0:14:16.57:0,17,370	0/0:16,0:9:17.69:0,18,242	0/0:23,0:23:51.09:0,51,1153	0/0:22,0:22:54.17:0,54,1271	0/0:10,0:10:24.06:0,24,489	0/0:48,0:47:99:0,102,1731	0/0:22,0:22:42.14:0,42,998	0/0:19,0:17:39.13:0,39,945	0/0:17,0:17:36.11:0,36,804	0/0:16,0:16:42.08:0,42,893	0/0:12,0:12:33.03:0,33,684	0/0:10,0:10:30.10:0,30,733	1/1:3,15:18:36.08:574,36,0	0/0:25,0:25:66.19:0,66,1426	1/1:5,22:27:51.17:857,51,0	0/0:26,0:26:55.52:0,56,1292	0/0:27,0:25:60.17:0,60,1235	0/0:13,0:13:33.10:0,33,724	0/0:15,0:15:36.12:0,36,847	0/0:4,0:4:12.04:0,12,265	0/0:13,0:13:33.11:0,33,769	0/0:15,0:15:39.13:0,39,934	0/0:17,0:17:48.16:0,48,1167	0/0:18,0:18:48.16:0,48,1110	0/0:32,0:32:68.94:0,69,1592	0/0:16,0:16:30.03:0,30,615
chr10	92332685	.	C	CT	1049.61	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.888;DP=560;FS=23.074;HRun=8;HaplotypeScore=66.5410;InbreedingCoeff=0.9658;MQ=59.65;MQ0=5;MQRankSum=0.298;QD=21.87;ReadPosRankSum=-4.492;VQSLOD=1.2262;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.01:0,96,871	0/0:8,0:8:17.19:0,17,108	0/0:28,0:16:26.30:0,26,248	0/0:17,0:11:20.98:0,21,190	0/0:23,0:23:63.03:0,63,576	0/0:21,0:21:57:0,57,513	0/0:13,0:13:30:0,30,269	1/1:12,36:48:99:1144,105,0	0/0:21,0:21:60.01:0,60,544	0/0:17,0:16:39.01:0,39,357	0/0:21,0:21:48.01:0,48,437	0/0:16,0:16:36.01:0,36,326	0/0:11,0:11:27.01:0,27,244	0/0:12,0:12:32.99:0,33,294	0/0:19,0:19:42.81:0,43,256	0/0:25,0:25:69:0,69,622	0/0:26,0:26:59.57:0,60,335	0/0:24,0:24:63.01:0,63,571	0/0:31,0:27:65.99:0,66,594	0/0:16,0:17:41.05:0,41,362	0/0:15,0:15:42.02:0,42,384	0/0:5,0:5:15.01:0,15,137	0/0:13,0:13:33:0,33,297	0/0:15,0:15:42.01:0,42,380	0/0:20,0:20:57.01:0,57,516	0/0:19,0:19:54:0,54,487	0/0:28,0:28:78.01:0,78,705	0/0:11,0:10:24.01:0,24,220
chr10	92332960	.	T	TTTCCA	5127.87	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.665;DP=625;FS=0.531;HRun=0;HaplotypeScore=113.1888;InbreedingCoeff=0.9684;MQ=67.14;MQ0=0;MQRankSum=-3.527;QD=77.69;ReadPosRankSum=4.853;VQSLOD=6.6272;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,2702	1/1:0,9:9:27.09:898,27,0	0/0:23,0:23:69.22:0,69,1430	0/0:24,0:23:66.23:0,66,1448	0/0:31,0:31:81.28:0,81,1851	0/0:16,0:15:42.10:0,42,883	0/0:29,0:29:81.26:0,81,1800	0/0:29,0:29:84.24:0,84,1776	0/0:23,0:23:66.23:0,66,1537	0/0:19,0:19:54.17:0,54,1180	0/0:14,0:14:42.14:0,42,974	0/0:26,0:26:75.22:0,75,1697	0/0:10,0:10:30.09:0,30,652	0/0:16,0:16:45.15:0,45,1045	1/1:1,18:21:51.18:1695,51,0	0/0:22,0:22:66.23:0,66,1537	1/1:1,31:36:78.27:2534,78,0	0/0:35,0:35:96.32:0,96,2180	0/0:21,0:21:60.17:0,60,1290	0/0:14,0:14:42.13:0,42,926	0/0:49,0:49:99:0,141,3232	0/0:5,0:5:9.03:0,9,177	0/0:15,0:15:42.13:0,42,897	0/0:23,0:23:69.15:0,69,1507	0/0:16,0:16:42.13:0,42,934	0/0:27,0:27:81.22:0,81,1834	0/0:27,0:27:78.25:0,78,1692	0/0:4,0:4:12.04:0,12,279
chr10	92333122	.	ACTTTCTTTCTTTCTCTTCCTTTCTTTCTTT	A	10093.29	PASS	AB=0.961;AC=39;AF=0.696;AN=56;BaseQRankSum=2.651;DP=502;FS=127.974;HRun=0;HaplotypeScore=281.7420;InbreedingCoeff=0.0367;MQ=65.24;MQ0=63;MQRankSum=-0.097;QD=23.31;ReadPosRankSum=6.704;VQSLOD=-0.1327;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:90.30:0,90,2263	0/1:13,0:11:20.54:336,0,21	0/0:15,0:14:20.06:0,20,404	0/0:13,0:12:17.63:0,18,340	1/1:15,0:12:9.03:180,9,0	1/1:15,0:8:24.06:462,24,0	1/1:16,0:11:18.06:351,18,0	1/1:14,0:14:18.03:308,18,0	1/1:11,0:9:21.07:446,21,0	0/1:21,0:13:41.06:609,0,41	0/1:14,0:12:8.85:359,0,9	0/1:16,0:14:41.58:409,0,42	1/1:11,0:9:20.38:290,20,0	1/1:7,0:6:12.04:246,12,0	0/1:15,0:11:99:347,0,101	1/1:16,0:12:11.56:448,12,0	0/1:36,0:23:32.21:542,0,32	0/1:9,0:4:16.82:121,0,17	1/1:17,0:15:6.55:370,7,0	0/1:4,0:15:99:221,0,127	1/1:12,0:8:12.04:253,12,0	1/1:13,0:11:5.98:80,6,0	0/1:19,0:17:98.19:98,0,202	0/1:24,0:14:58.51:383,0,59	0/1:19,0:14:74.83:538,0,75	1/1:7,23:27:50.72:1076,51,0	1/1:30,0:22:39.13:825,39,0	1/1:23,0:22:39.12:795,39,0
chr10	92333133	.	TTC	T	7803.84	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=5.874;DP=457;FS=93.548;HRun=0;HaplotypeScore=78.1648;InbreedingCoeff=0.6575;MQ=54.58;MQ0=74;MQRankSum=-2.272;QD=19.51;ReadPosRankSum=2.311;VQSLOD=1.4276;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:89.25:0,89,1607	1/1:11,0:9:24.08:330,24,0	0/0:9,0:9:20.13:0,20,354	0/0:9,0:8:18.03:0,18,277	1/1:12,0:9:9.03:125,9,0	1/1:16,0:8:24.05:300,24,0	1/1:13,0:8:18.06:241,18,0	1/1:10,0:9:18.02:219,18,0	1/1:9,0:7:20.98:261,21,0	1/1:24,0:15:45.12:572,45,0	1/1:15,0:13:24.08:319,24,0	1/1:14,0:12:27.09:369,27,0	1/1:11,0:8:24.08:326,24,0	1/1:8,0:5:12.04:166,12,0	1/1:16,0:11:27.07:351,27,0	1/1:13,0:9:25.32:323,25,0	1/1:34,0:18:38.86:510,39,0	1/1:11,0:5:1.25:76,1,0	1/1:12,0:10:2.96:224,3,0	0/1:16,0:14:13.88:145,0,14	1/1:10,0:5:12.04:153,12,0	1/1:13,0:11:11.99:127,12,0	1/1:18,0:16:18.49:230,18,0	1/1:27,0:15:3.09:319,3,0	1/1:19,0:14:36.12:493,36,0	1/1:27,0:24:46.70:589,47,0	1/1:21,4:17:39.13:539,39,0	1/1:16,0:13:37.01:496,37,0
chr10	92333134	.	TCTCTTC	T	11914.09	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=5.134;DP=455;FS=98.868;HRun=0;HaplotypeScore=85.0180;InbreedingCoeff=0.5899;MQ=53.08;MQ0=77;MQRankSum=-2.775;QD=29.86;ReadPosRankSum=2.095;VQSLOD=0.8082;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:89.31:0,89,2003	1/1:11,0:9:24.08:514,24,0	0/0:10,0:9:20.06:0,20,410	0/0:8,0:7:17.79:0,18,340	1/1:2,10:9:9.03:180,9,0	1/1:16,0:8:24.06:462,24,0	1/1:13,0:8:18.06:351,18,0	1/1:4,6:9:18.03:308,18,0	1/1:9,0:7:21.07:428,21,0	1/1:24,0:15:45.15:862,45,0	1/1:5,11:13:24.08:462,24,0	1/1:14,0:12:27.09:561,27,0	1/1:11,0:8:24.08:506,24,0	1/1:8,0:5:12.04:246,12,0	1/1:16,0:11:27.09:513,27,0	1/1:13,0:9:27.09:530,27,0	1/1:35,0:18:39.12:787,39,0	0/1:12,0:5:12.14:135,0,12	1/1:4,7:9:6.55:370,7,0	0/1:16,0:14:10.33:221,0,10	1/1:9,0:4:12.04:253,12,0	1/1:4,9:11:12:172,12,0	1/1:6,12:16:18.89:276,19,0	0/1:26,0:14:3.45:501,0,3	1/1:19,0:14:36.12:725,36,0	1/1:27,0:24:48.42:970,48,0	1/1:24,0:16:39.13:786,39,0	1/1:16,0:13:39.12:795,39,0
chr10	92333135	.	C	CTT	8253.12	PASS	AB=0.939;AC=47;AF=0.839;AN=56;BaseQRankSum=5.912;DP=458;FS=91.397;HRun=3;HaplotypeScore=77.3601;InbreedingCoeff=0.4721;MQ=52.77;MQ0=78;MQRankSum=-2.372;QD=20.58;ReadPosRankSum=1.877;VQSLOD=0.7527;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:37:69.28:0,69,1334	1/1:12,0:10:27:350,27,0	0/0:9,0:9:0.22:0,0,282	0/0:8,0:7:18.03:0,18,243	1/1:10,2:9:9.03:126,9,0	1/1:14,2:8:24.05:326,24,0	1/1:12,0:8:18.06:260,18,0	1/1:9,0:8:18.01:226,18,0	1/1:9,0:7:21.07:286,21,0	1/1:20,4:15:45.11:569,45,0	1/1:15,2:13:24.08:355,24,0	1/1:9,5:12:27.09:366,27,0	1/1:11,0:8:24.08:328,24,0	1/1:7,0:4:12.04:170,12,0	1/1:16,0:11:27.07:373,27,0	1/1:13,0:9:27.08:372,27,0	1/1:27,7:18:41.93:564,42,0	0/1:10,1:6:5.92:76,0,6	0/1:11,0:9:21.23:238,0,21	0/1:14,2:14:30.34:164,0,30	1/1:10,0:5:12.04:180,12,0	1/1:11,2:11:11.99:129,12,0	1/1:16,2:16:18.03:241,18,0	1/1:19,8:15:3.18:345,3,0	1/1:15,4:14:39.02:507,39,0	1/1:25,2:24:48.11:676,48,0	1/1:22,1:15:39.06:507,39,0	1/1:17,0:13:39.12:519,39,0
chr10	92333136	.	TC	T	5101.67	PASS	AB=0.894;AC=47;AF=0.839;AN=56;BaseQRankSum=5.344;DP=467;FS=119.315;HRun=1;HaplotypeScore=91.1423;InbreedingCoeff=0.5790;MQ=52.02;MQ0=81;MQRankSum=-1.255;QD=12.47;ReadPosRankSum=3.690;VQSLOD=1.5284;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,1:36:90.29:0,90,1415	1/1:2,11:11:22.18:216,22,0	0/0:10,0:9:23.94:0,24,326	0/0:8,0:7:18.03:0,18,248	1/1:12,0:9:8.93:64,9,0	1/1:5,12:9:21.91:206,22,0	1/1:1,11:8:17.92:160,18,0	1/1:8,0:6:17.32:130,17,0	1/1:1,8:7:21.01:212,21,0	1/1:7,17:15:44.74:388,45,0	1/1:16,1:13:23.88:193,24,0	1/1:4,9:11:26.95:247,27,0	1/1:2,10:9:23.95:205,24,0	1/1:1,6:4:11.93:93,12,0	1/1:1,15:11:26.69:224,27,0	1/1:1,12:9:26.96:238,27,0	1/1:16,20:19:24.68:298,25,0	0/1:12,5:9:22.51:77,0,23	0/1:9,1:8:3.88:185,0,4	0/1:16,0:14:20.65:84,0,21	1/1:4,7:6:12.01:115,12,0	1/1:11,2:11:11.77:77,12,0	1/1:14,4:16:16.54:108,17,0	1/1:17,11:16:8.22:214,8,0	1/1:6,14:14:33.66:303,34,0	1/1:25,2:24:48.01:438,48,0	1/1:5,18:16:38.21:291,38,0	1/1:3,14:13:38.96:336,39,0
chr10	92333139	.	TC	T	3896.68	PASS	AB=0.896;AC=48;AF=0.857;AN=56;BaseQRankSum=7.115;DP=496;FS=93.845;HRun=2;HaplotypeScore=89.2587;InbreedingCoeff=0.6043;MQ=47.56;MQ0=96;MQRankSum=-0.928;QD=8.86;ReadPosRankSum=2.929;VQSLOD=-0.4822;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:36:89.59:0,90,1309	1/1:2,11:11:9.70:176,10,0	0/0:9,0:8:17.89:0,18,231	0/0:7,0:6:9.03:0,9,124	1/1:13,0:9:8.84:55,9,0	1/1:6,11:9:21.83:162,22,0	1/1:2,10:8:17.47:102,17,0	1/1:9,0:6:12.26:78,12,0	1/1:2,7:6:17.91:139,18,0	1/1:7,17:14:41.18:319,41,0	1/1:20,1:15:23.03:131,23,0	1/1:3,9:10:26.70:200,27,0	1/1:4,10:10:23.81:181,24,0	1/1:4,5:5:13.64:85,14,0	1/1:4,14:12:26.11:178,26,0	1/1:3,11:8:23.70:172,24,0	1/1:21,18:21:8.62:245,9,0	0/1:14,5:11:7.85:51,0,8	1/1:9,1:8:3.48:97,3,0	0/1:17,0:15:7.64:54,0,8	1/1:5,7:6:11.86:88,12,0	1/1:12,2:11:8.65:49,9,0	1/1:16,4:18:15.87:90,16,0	1/1:23,9:15:13.31:160,13,0	1/1:7,14:15:33.07:244,33,0	1/1:25,2:24:43.57:318,44,0	1/1:4,18:15:36.45:248,36,0	1/1:7,14:16:35.79:274,36,0
chr10	92333141	.	CT	C	44.49	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=4.227;DP=543;FS=7.932;HRun=3;HaplotypeScore=107.4056;InbreedingCoeff=0.2595;MQ=41.94;MQ0=109;MQRankSum=0.274;QD=0.21;ReadPosRankSum=3.419;VQSLOD=-0.5160;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:37:92.40:0,92,1245	0/1:13,0:11:1.92:2,0,31	0/0:7,0:6:15.04:0,15,191	0/0:6,0:5:6.02:0,6,81	0/0:13,0:9:2.24:0,2,5	1/1:17,1:10:0.50:30,1,0	0/0:13,0:8:2.66:0,3,6	0/0:21,0:13:2.97:0,3,27	0/0:9,0:6:0.99:0,1,3	0/1:30,0:19:3.68:4,0,17	0/0:22,0:16:0.63:0,1,4	0/1:14,0:12:1.56:2,0,19	0/1:16,0:11:0.16:1,0,0	0/0:12,0:6:4.59:0,5,15	0/0:18,0:12:1.16:0,1,10	0/0:14,0:7:0.98:0,1,2	0/0:44,0:24:5.60:0,6,77	1/1:14,5:11:0.06:82,0,0	0/0:15,0:11:4.86:0,5,30	0/0:18,0:16:4.24:0,4,35	1/1:13,1:7:0.39:1,0,0	0/0:15,0:11:1.24:0,1,6	0/0:21,0:18:4.62:0,5,22	1/1:34,1:15:1.05:19,1,0	0/0:24,0:18:13.45:0,13,82	1/1:27,0:24:4.61:10,5,0	0/0:22,0:14:7.82:0,8,38	0/1:22,0:16:0.41:0,0,1
chr10	92333234	.	C	CT	331.44	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=-1.000;DP=588;FS=3.399;HRun=2;HaplotypeScore=101.8189;InbreedingCoeff=0.4313;MQ=26.57;MQ0=151;MQRankSum=-0.184;QD=3.10;ReadPosRankSum=-1.318;VQSLOD=-0.2677;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:25:30.09:0,30,367	1/1:7,7:11:20.38:255,20,0	./.	0/0:1,0:1:3.01:0,3,37	0/0:38,0:31:78.16:0,78,942	0/0:10,0:7:8.71:0,9,48	0/0:6,0:3:7.47:0,7,41	0/1:11,0:6:3.09:3,0,33	0/0:24,0:12:35.74:0,36,337	0/0:20,0:12:30.43:0,30,341	0/0:35,0:30:43.50:0,44,398	0/0:17,0:13:21.36:0,21,222	0/0:14,0:9:8.96:0,9,79	0/0:10,0:6:5.99:0,6,58	0/1:18,0:11:0.75:5,0,1	0/0:6,0:1:3.01:0,3,37	1/1:33,7:20:14.93:178,15,0	0/1:23,0:7:15.06:17,0,15	0/0:12,0:7:20.98:0,21,236	0/0:31,0:19:41.71:0,42,381	0/0:15,0:6:6.90:0,7,76	0/0:22,0:14:23.95:0,24,245	0/0:25,0:18:23.29:0,23,187	0/0:50,0:15:2.24:0,2,86	0/0:26,0:21:25.33:0,25,220	0/0:23,0:14:29.65:0,30,235	0/0:39,0:30:70.34:0,70,529	0/0:21,0:6:2.99:0,3,23
chr10	92333238	.	C	CT	424.36	PASS	AB=0.976;AC=8;AF=0.148;AN=54;BaseQRankSum=-1.076;DP=578;FS=0.850;HRun=2;HaplotypeScore=105.8959;InbreedingCoeff=0.5518;MQ=29.58;MQ0=141;MQRankSum=0.179;QD=3.05;ReadPosRankSum=-0.931;VQSLOD=-0.3056;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:25:39.10:0,39,462	1/1:13,0:10:24.07:284,24,0	./.	0/0:3,0:3:5.98:0,6,58	0/0:37,0:30:73.79:0,74,662	0/0:11,0:8:8.56:0,9,44	0/0:6,0:3:7.92:0,8,41	0/0:11,0:6:14.40:0,14,144	0/0:24,0:12:31.88:0,32,244	0/0:23,0:15:13.12:0,13,260	0/0:35,0:31:21.20:0,21,297	0/0:18,0:13:10.98:0,11,176	0/0:12,0:8:8.81:0,9,69	0/0:10,0:7:5.87:0,6,36	1/1:10,9:12:6.01:68,6,0	0/0:4,0:1:2.88:0,3,15	1/1:38,0:20:15.93:178,16,0	0/1:19,1:6:7.91:29,0,8	0/0:11,0:7:21.07:0,21,258	0/0:31,0:19:38.09:0,38,315	0/0:16,0:6:8.02:0,8,64	0/0:21,0:14:23.50:0,23,179	0/0:25,0:18:21.69:0,22,150	0/1:49,0:14:1.44:1,0,85	0/0:26,0:21:18.17:0,18,171	0/0:22,0:13:27.82:0,28,173	0/0:39,0:30:63:0,63,390	0/0:19,0:6:2.99:0,3,23
chr10	92333239	.	TTCC	T	217.62	PASS	AB=0.991;AC=7;AF=0.130;AN=54;BaseQRankSum=-0.539;DP=572;FS=5.528;HRun=0;HaplotypeScore=113.6272;InbreedingCoeff=0.3580;MQ=29.87;MQ0=138;MQRankSum=1.636;QD=1.59;ReadPosRankSum=-1.880;VQSLOD=1.7137;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:27:45.15:0,45,738	1/1:11,2:10:23.42:180,23,0	./.	0/0:3,0:3:8.89:0,9,89	0/0:37,0:30:58.05:0,58,936	0/0:11,0:8:10.72:0,11,112	0/0:6,0:3:8.39:0,8,73	0/0:11,0:6:14.03:0,14,100	0/0:23,0:12:32.94:0,33,376	0/0:23,0:15:20.83:0,21,394	0/0:34,0:30:20.41:0,20,444	0/0:18,0:13:11.09:0,11,243	0/0:11,0:7:9.01:0,9,109	0/0:10,0:7:6.90:0,7,70	1/1:14,5:12:4.92:67,5,0	0/0:4,0:1:2.94:0,3,18	0/1:36,1:20:9.07:62,0,9	0/1:20,0:6:31.03:31,0,44	0/0:11,0:7:21.07:0,21,306	0/0:31,0:19:37.52:0,38,487	0/0:15,0:6:8.92:0,9,86	0/0:21,0:14:24.06:0,24,293	0/0:24,0:17:15.38:0,15,200	0/1:48,0:14:5.57:6,0,145	0/0:25,0:21:27.41:0,27,261	0/0:22,0:13:29.89:0,30,304	0/0:38,0:29:67.36:0,67,677	0/0:19,0:6:3.01:0,3,58
chr10	92333947	.	C	CAAG	2940.94	PASS	AB=0.763;AC=9;AF=0.161;AN=56;BaseQRankSum=14.397;DP=675;FS=226.032;HRun=0;HaplotypeScore=130.0327;InbreedingCoeff=-0.1952;MQ=85.98;MQ0=1;MQRankSum=-14.671;QD=12.00;ReadPosRankSum=2.346;VQSLOD=-0.3229;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:93.20:0,93,1624	0/0:12,0:12:36.12:0,36,662	0/0:26,0:26:75.24:0,75,1296	0/0:28,0:27:71.83:0,72,1213	0/0:17,0:17:51.15:0,51,890	0/0:14,0:14:42.14:0,42,783	0/0:29,0:29:81.25:0,81,1429	0/0:30,0:30:87.29:0,87,1575	0/0:20,0:20:60.21:0,60,1105	0/1:25,9:34:99:449,0,1055	0/1:13,8:21:99:260,0,625	0/1:22,10:31:99:349,0,958	0/1:14,13:27:99:567,0,484	0/1:16,8:24:99:250,0,738	0/0:18,0:18:54.15:0,54,939	0/0:18,0:18:54.17:0,54,973	0/0:30,0:29:84.24:0,84,1482	0/1:17,5:21:99:184,0,794	0/0:17,0:17:51.16:0,51,907	0/0:18,0:18:54.18:0,54,994	0/0:35,0:34:96.33:0,96,1788	0/1:24,9:33:99:358,0,1058	0/1:16,10:26:99:449,0,557	0/0:26,2:28:7.67:0,8,1100	0/1:21,5:26:99:216,0,849	0/0:26,0:26:78.25:0,78,1419	0/0:14,0:14:36.07:0,36,602	0/0:15,0:15:45.15:0,45,838
chr10	92333999	.	CCTCTCTCTCT	C	1702.06	PASS	AB=0.948;AC=21;AF=0.553;AN=38;BaseQRankSum=0.029;DP=562;FS=7.772;HRun=0;HaplotypeScore=139.7749;InbreedingCoeff=0.1379;MQ=64.22;MQ0=43;MQRankSum=2.811;QD=6.23;ReadPosRankSum=-0.512;VQSLOD=1.5873;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:28:42.14:49,0,42	./.	./.	./.	./.	1/1:15,0:16:6.02:132,6,0	0/1:20,0:20:11.50:44,0,12	0/0:26,0:26:1.55:0,2,4	1/1:18,0:17:8.49:78,8,0	0/0:19,0:17:1.55:0,2,4	./.	0/0:17,6:19:0:0,0,1	0/0:11,0:10:7.09:0,7,37	0/1:10,0:10:40.09:40,0,41	1/1:16,0:15:11.01:133,11,0	1/1:12,0:11:8.90:144,9,0	1/1:28,0:23:12.04:242,12,0	1/1:18,0:15:12.01:208,12,0	1/1:17,3:18:8.89:188,9,0	0/0:17,0:15:1.25:0,1,3	0/1:36,0:30:32.02:185,0,32	./.	./.	0/0:26,0:24:6.02:0,6,104	1/1:17,0:15:2.84:52,3,0	0/1:21,0:27:95.55:330,0,96	./.	./.
chr10	92334058	.	CTG	C	1195.81	PASS	AB=1.000;AC=29;AF=0.580;AN=50;BaseQRankSum=-4.108;DP=555;FS=15.728;HRun=0;HaplotypeScore=108.3649;InbreedingCoeff=0.4496;MQ=40.73;MQ0=95;MQRankSum=-1.954;QD=3.09;ReadPosRankSum=2.077;VQSLOD=1.0401;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:26:28.99:29,0,73	1/1:12,0:7:2.87:15,3,0	./.	./.	0/0:6,12:16:0:0,0,0	1/1:18,1:18:10.98:67,11,0	1/1:20,20:35:1.12:13,1,0	1/1:16,0:16:1.72:4,2,0	1/1:18,0:12:8.97:72,9,0	0/0:19,0:16:22.49:0,22,186	0/1:14,0:13:31.43:31,0,33	0/0:30,0:23:19.93:0,20,137	0/0:14,0:13:14.94:0,15,113	0/0:13,0:12:11.31:0,11,73	0/1:18,0:15:0:0,0,0	1/1:16,0:16:19.38:129,19,0	1/1:34,0:25:5.38:29,5,0	0/1:24,0:16:29.11:29,0,107	1/1:9,0:7:8.98:74,9,0	1/1:18,0:15:17.90:138,18,0	1/1:39,0:26:32.93:269,33,0	0/0:18,0:16:22.68:0,23,158	0/0:15,0:12:11.91:0,12,88	0/0:22,0:18:20.75:0,21,148	./.	1/1:34,0:29:2.96:143,3,0	0/1:24,0:20:14.98:148,0,15	1/1:15,0:9:23.52:174,24,0
chr10	92334089	.	TGTGTGTGTGC	T	126.98	PASS	AB=0.874;AC=5;AF=0.089;AN=56;BaseQRankSum=3.198;DP=577;FS=3.840;HRun=0;HaplotypeScore=161.7851;InbreedingCoeff=0.4317;MQ=52.46;MQ0=79;MQRankSum=-3.745;QD=1.57;ReadPosRankSum=0.427;VQSLOD=2.6965;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:23:38.72:0,39,930	1/1:11,0:5:3.01:67,3,0	0/0:21,0:4:8.66:0,9,65	0/0:31,0:11:14.23:0,14,62	0/0:23,0:22:22.14:0,22,205	0/0:22,0:21:31.74:0,32,246	0/0:37,0:36:28.86:0,29,345	0/1:19,0:17:7.49:7,0,166	0/0:16,0:12:29.80:0,30,434	0/0:20,0:18:40.81:0,41,898	0/0:17,0:16:13.24:0,13,253	0/0:22,0:18:27.05:0,27,739	0/0:9,0:8:20.96:0,21,510	0/0:13,0:12:20.99:0,21,535	0/1:7,11:15:0:0,0,0	0/0:12,0:12:28.74:0,29,341	0/1:33,0:25:6:149,0,6	0/0:19,0:15:42.02:0,42,984	0/0:9,0:7:20.75:0,21,312	0/0:18,0:16:27:0,27,435	0/0:36,0:26:69.01:0,69,1105	0/0:21,0:19:33.10:0,33,897	0/0:15,0:12:20.76:0,21,461	0/0:22,0:18:30.51:0,31,763	0/0:22,0:17:17.94:0,18,221	0/0:28,0:25:58.72:0,59,827	0/0:20,0:17:38.81:0,39,816	0/0:12,0:9:27.09:0,27,562
chr10	92334091	.	TGTGTGTGC	T	227.97	PASS	AB=0.982;AC=7;AF=0.125;AN=56;BaseQRankSum=0.024;DP=563;FS=4.799;HRun=0;HaplotypeScore=147.9103;InbreedingCoeff=0.4645;MQ=55.27;MQ0=73;MQRankSum=-3.011;QD=2.43;ReadPosRankSum=-0.306;VQSLOD=2.5731;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:22:38.72:0,39,764	1/1:7,2:4:3.01:84,3,0	0/0:24,0:6:8.60:0,9,69	0/0:33,0:12:14.04:0,14,63	0/0:24,0:23:25.11:0,25,212	0/1:21,0:20:43.29:43,0,137	0/0:37,0:36:19.45:0,19,270	0/1:14,0:13:55.97:56,0,129	0/0:17,0:13:32.79:0,33,354	0/0:19,0:17:29.64:0,30,681	0/0:17,0:16:15.75:0,16,218	0/0:22,0:18:27.03:0,27,595	0/0:9,0:8:20.96:0,21,398	0/0:12,0:11:20.99:0,21,435	0/1:17,1:15:0:0,0,0	0/0:12,0:12:4.22:0,4,181	1/1:12,20:25:8.93:163,9,0	0/0:19,0:15:42.02:0,42,783	0/0:10,0:8:19.31:0,19,237	0/0:16,0:14:26.03:0,26,284	0/0:35,0:26:68.99:0,69,811	0/0:21,0:19:33.04:0,33,666	0/0:15,0:12:20.75:0,21,353	0/0:21,0:17:30.51:0,31,600	0/0:20,0:16:17.89:0,18,170	0/0:26,0:24:27.97:0,28,580	0/0:20,0:17:37.71:0,38,591	0/0:12,0:9:27.09:0,27,391
chr10	92334459	.	CTCTCT	C	373.22	PASS	AB=1.000;AC=5;AF=0.104;AN=48;BaseQRankSum=1.219;DP=602;FS=4.497;HRun=0;HaplotypeScore=135.0901;InbreedingCoeff=0.5162;MQ=67.65;MQ0=16;MQRankSum=-1.554;QD=7.78;ReadPosRankSum=0.933;VQSLOD=2.4096;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:33.07:0,33,823	./.	./.	./.	0/0:15,0:15:18.06:0,18,461	1/1:10,5:15:9.03:155,9,0	0/0:12,0:12:0.47:0,0,1	./.	0/0:16,0:16:15.05:0,15,353	0/0:32,0:29:30.10:0,30,553	0/0:20,0:19:12:0,12,200	0/0:17,0:14:9:0,9,147	0/0:13,0:12:12.04:0,12,221	0/0:28,0:26:11.91:0,12,86	0/0:22,0:22:21.06:0,21,415	1/1:16,0:16:18.06:306,18,0	0/0:20,0:20:6.15:0,6,282	0/0:12,0:12:9.01:0,9,149	0/1:17,0:15:28.99:29,0,155	0/0:12,0:12:6.02:0,6,152	0/0:26,0:26:15.02:0,15,293	0/0:15,0:13:8.94:0,9,92	0/0:13,0:14:6.02:0,6,133	0/0:26,0:26:7.63:0,8,84	0/0:17,0:17:11.94:0,12,119	0/0:13,0:13:14.08:0,14,319	0/0:22,0:21:9.03:0,9,245	0/0:15,0:15:27.09:0,27,734
chr10	92334460	.	T	TC	6263.88	PASS	AB=0.929;AC=21;AF=0.375;AN=56;BaseQRankSum=-5.794;DP=611;FS=1.957;HRun=1;HaplotypeScore=85.0446;InbreedingCoeff=0.9310;MQ=67.21;MQ0=20;MQRankSum=-2.698;QD=29.69;ReadPosRankSum=2.439;VQSLOD=4.7614;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:94.17:0,94,1191	0/0:9,0:9:27.09:0,27,350	0/0:38,0:17:41.08:0,41,452	0/0:69,0:20:36.06:0,36,480	0/0:15,0:15:45.15:0,45,584	0/0:15,0:15:39:0,39,450	0/0:13,0:12:29.02:0,29,387	0/0:40,0:37:91.14:0,91,1272	0/0:16,0:16:48.16:0,48,622	1/1:7,27:32:68.25:1177,68,0	1/1:4,16:19:21.89:607,22,0	1/1:1,16:14:14.31:515,14,0	1/1:3,10:12:25.87:402,26,0	1/1:5,22:26:64.95:914,65,0	0/0:22,0:22:66.21:0,66,857	0/0:16,0:16:45.11:0,45,523	0/0:21,0:21:59.67:0,60,734	1/1:2,10:12:33.57:477,34,0	0/0:18,0:14:33.11:0,33,428	0/0:12,0:12:33.11:0,33,428	0/0:26,0:26:75.24:0,75,972	1/1:5,11:14:29.53:417,30,0	1/1:3,11:14:11.36:432,11,0	1/1:5,21:26:49.91:734,50,0	1/1:4,13:17:40.69:582,41,0	0/1:12,1:13:5.50:5,0,427	0/0:22,0:21:63.20:0,63,815	0/0:15,0:15:45.10:0,45,565
chr10	92334523	.	CT	C	156.72	PASS	AB=0.882;AC=6;AF=0.107;AN=56;BaseQRankSum=3.837;DP=479;FS=1.037;HRun=2;HaplotypeScore=61.0605;InbreedingCoeff=0.1877;MQ=39.29;MQ0=51;MQRankSum=-1.016;QD=2.96;ReadPosRankSum=-0.961;VQSLOD=-0.5867;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.06:0,45,620	0/0:2,0:2:6:0,6,54	0/0:76,0:7:8.11:0,8,138	0/0:92,0:8:16.29:0,16,189	0/0:8,0:8:21.07:0,21,310	1/1:6,0:6:10.24:58,10,0	0/0:14,2:14:33.54:0,34,358	0/0:31,0:20:49.93:0,50,468	0/0:9,0:9:18.24:0,18,300	0/0:21,0:17:46.53:0,47,559	0/0:14,0:9:20.94:0,21,274	0/0:13,0:10:28.58:0,29,353	0/0:9,0:8:21.07:0,21,296	0/0:20,0:18:39.24:0,39,568	0/0:18,0:18:48.64:0,49,493	0/1:4,7:11:81.08:181,0,81	0/0:15,0:15:27.18:0,27,364	0/0:5,0:5:14.20:0,14,133	0/1:10,1:8:14.06:14,0,285	0/0:3,0:3:6.02:0,6,90	0/1:14,0:13:17.62:18,0,207	0/0:15,0:13:32.51:0,33,417	0/0:9,0:9:27.09:0,27,394	0/0:11,0:11:16.72:0,17,202	0/0:13,0:13:32.13:0,32,424	0/0:7,0:5:14.54:0,15,184	0/0:3,0:3:9.03:0,9,135	0/1:11,0:10:6.56:7,0,375
chr10	92335948	.	CAGAAAGAA	C	15945.38	PASS	AB=0.938;AC=44;AF=0.815;AN=54;BaseQRankSum=-0.027;DP=543;FS=2.012;HRun=0;HaplotypeScore=155.4593;InbreedingCoeff=0.6693;MQ=57.90;MQ0=1;MQRankSum=-1.623;QD=35.43;ReadPosRankSum=0.549;VQSLOD=4.7508;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:57.17:0,57,1707	0/0:3,0:3:6.01:0,6,62	./.	0/0:23,0:15:15.84:0,16,343	1/1:11,12:23:45.13:1072,45,0	1/1:5,13:18:21.07:523,21,0	1/1:8,12:20:1.97:367,2,0	1/1:15,10:25:24.07:471,24,0	1/1:13,8:21:42.12:961,42,0	1/1:2,25:27:72.68:1577,73,0	1/1:11,5:16:30.10:712,30,0	1/1:16,8:24:45.12:945,45,0	1/1:4,13:16:21.07:542,21,0	1/1:2,9:11:18.06:462,18,0	0/0:24,0:24:30.01:0,30,382	1/1:5,13:18:8.95:233,9,0	0/1:25,0:25:83.51:84,0,195	1/1:8,2:10:18.02:353,18,0	0/1:6,1:6:11.21:72,0,11	1/1:3,19:22:48.16:1113,48,0	1/1:15,0:15:21.04:382,21,0	1/1:3,14:17:21.01:503,21,0	1/1:3,19:22:29.47:773,29,0	1/1:10,10:20:15.05:317,15,0	1/1:8,21:28:54.19:1397,54,0	1/1:7,20:27:54.16:1253,54,0	1/1:13,11:24:41.17:981,41,0	1/1:3,9:12:33.11:854,33,0
chr10	92335977	.	AGAG	A	384.75	PASS	AB=0.881;AC=7;AF=0.125;AN=56;BaseQRankSum=2.366;DP=533;FS=2.797;HRun=0;HaplotypeScore=180.3707;InbreedingCoeff=0.1729;MQ=44.52;MQ0=5;MQRankSum=-3.204;QD=3.85;ReadPosRankSum=1.366;VQSLOD=2.1029;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:62.62:0,63,1494	1/1:1,2:4:11.60:90,12,0	0/0:11,0:1:3.01:0,3,36	0/0:18,0:8:20.24:0,20,324	0/0:21,0:21:54.26:0,54,565	0/0:22,0:22:38.85:0,39,462	0/1:22,0:21:0.99:1,0,465	0/0:23,0:23:57.15:0,57,1018	0/0:14,0:14:28.07:0,28,260	0/0:30,0:30:83.01:0,83,1055	0/0:11,0:11:28.79:0,29,244	0/0:23,0:23:53.84:0,54,740	0/0:16,0:15:31.01:0,31,355	0/0:15,0:15:31.37:0,31,384	0/1:11,5:16:31.87:140,0,32	0/0:18,0:18:35.97:0,36,569	0/1:19,3:24:35.68:227,0,36	0/0:16,0:16:43.79:0,44,708	0/0:12,0:11:33.09:0,33,597	0/0:26,0:26:65.03:0,65,823	0/1:14,0:15:31.68:32,0,397	0/0:16,0:16:26.66:0,27,290	0/0:22,0:22:33.54:0,34,267	0/1:16,0:17:22.28:22,0,248	0/0:27,0:27:64.03:0,64,569	0/0:23,0:23:64.58:0,65,751	0/0:20,0:20:47.75:0,48,533	0/0:22,0:22:61.26:0,61,769
chr10	92335978	.	G	GAAAGAA	681.13	PASS	AB=0.892;AC=6;AF=0.111;AN=54;BaseQRankSum=0.267;DP=539;FS=26.550;HRun=0;HaplotypeScore=206.8200;InbreedingCoeff=0.3228;MQ=44.53;MQ0=5;MQRankSum=-4.763;QD=9.59;ReadPosRankSum=-4.207;VQSLOD=0.5783;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.53:0,70,1456	1/1:4,0:4:8.93:200,9,0	./.	0/0:17,0:7:20.42:0,20,296	0/0:21,0:21:25.79:0,26,821	0/0:22,0:22:35.60:0,36,565	0/0:22,0:21:12.96:0,13,665	0/0:22,0:22:42.96:0,43,958	0/1:14,0:14:4.01:4,0,486	0/0:30,0:30:48.09:0,48,1465	0/1:11,0:11:14.40:14,0,248	0/0:23,0:23:50.69:0,51,1053	0/0:17,0:16:15.04:0,15,480	0/0:15,0:15:15.08:0,15,555	0/1:6,7:17:2.46:316,0,2	0/0:19,0:19:32.93:0,33,648	0/1:24,1:24:55.44:264,0,55	0/0:16,0:16:27.66:0,28,787	0/0:12,0:11:33.04:0,33,602	0/0:26,0:26:26.40:0,26,1270	0/0:15,0:15:15.35:0,15,462	0/0:16,0:16:26.91:0,27,500	0/0:22,0:22:11.11:0,11,451	0/0:18,0:17:26.89:0,27,435	0/0:28,0:28:48.32:0,48,1246	0/0:24,0:24:30.59:0,31,1085	0/0:21,0:21:11.40:0,11,880	0/0:22,0:22:35.97:0,36,1017
chr10	92336005	.	A	AAAGG	9691.08	PASS	AB=1.000;AC=39;AF=0.780;AN=50;BaseQRankSum=-6.835;DP=565;FS=20.881;HRun=0;HaplotypeScore=154.4958;InbreedingCoeff=0.6760;MQ=45.42;MQ0=14;MQRankSum=2.442;QD=22.54;ReadPosRankSum=1.562;VQSLOD=2.9305;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:48.20:0,48,721	0/0:4,0:4:6.02:0,6,93	./.	./.	1/1:11,12:23:42.03:818,42,0	0/0:17,0:17:28.74:0,29,252	0/1:19,0:18:0.05:31,0,0	./.	1/1:8,10:18:9.03:210,9,0	1/1:26,5:31:42.13:857,42,0	1/1:3,6:11:12.04:250,12,0	1/1:11,18:29:36.09:796,36,0	1/1:10,4:13:24.06:476,24,0	1/1:15,0:15:15.04:215,15,0	0/1:15,0:15:4.88:5,0,149	0/0:23,0:23:25.29:0,25,316	0/1:17,0:16:39.64:40,0,103	1/1:7,13:21:21.54:473,22,0	1/1:10,8:15:30.10:671,30,0	1/1:18,6:23:33.07:645,33,0	1/1:16,5:21:33.10:649,33,0	1/1:10,2:12:15.05:335,15,0	1/1:16,4:19:15.05:350,15,0	1/1:15,3:17:20.96:440,21,0	1/1:29,0:29:27.08:401,27,0	1/1:15,8:23:33.10:704,33,0	1/1:12,15:27:30.10:689,30,0	1/1:10,10:21:27.09:634,27,0
chr10	92336044	.	GGA	G	336.36	PASS	AB=0.762;AC=2;AF=0.036;AN=56;BaseQRankSum=6.519;DP=760;FS=9.464;HRun=0;HaplotypeScore=152.3305;InbreedingCoeff=-0.0394;MQ=48.66;MQ0=30;MQRankSum=-3.737;QD=6.23;ReadPosRankSum=3.935;VQSLOD=2.3850;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:44:99:0,99,1653	0/0:4,0:4:9.03:0,9,164	0/0:31,0:11:33.06:0,33,409	0/0:27,0:8:21.07:0,21,292	0/0:32,0:31:77.10:0,77,1137	0/1:17,7:24:99:188,0,136	0/0:26,0:23:36.52:0,37,592	0/0:45,0:37:99:0,102,1451	0/0:20,0:20:33.11:0,33,482	0/0:36,0:36:99:0,102,1490	0/0:19,0:19:48.16:0,48,699	0/0:35,0:33:69.23:0,69,987	0/0:21,0:21:63.21:0,63,982	0/0:19,0:17:45.15:0,45,677	0/0:16,0:16:39.13:0,39,637	0/1:20,10:30:99:237,0,290	0/0:26,0:20:54.11:0,54,808	0/0:30,0:29:60.05:0,60,782	0/0:33,0:29:80.73:0,81,1137	0/0:24,0:23:63.12:0,63,887	0/0:42,0:42:99:0,102,1434	0/0:13,0:13:36.12:0,36,520	0/0:18,0:16:37.93:0,38,537	0/0:32,0:31:72.24:0,72,1059	0/0:27,0:27:73.45:0,73,1022	0/0:24,0:23:69.23:0,69,1017	0/0:32,0:30:72.24:0,72,1073	0/0:28,0:26:66.22:0,66,919
chr10	92336049	.	AGG	A	327.28	PASS	AB=0.836;AC=3;AF=0.054;AN=56;BaseQRankSum=7.523;DP=749;FS=5.770;HRun=3;HaplotypeScore=143.2723;InbreedingCoeff=-0.0499;MQ=47.73;MQ0=42;MQRankSum=-4.575;QD=3.94;ReadPosRankSum=4.011;VQSLOD=0.0438;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:41:49.22:0,49,1688	0/0:4,0:4:9.03:0,9,173	0/0:31,0:11:33.04:0,33,564	0/0:27,0:8:21.07:0,21,404	0/0:32,0:31:55.43:0,55,1364	0/1:17,8:25:99:192,0,173	0/1:28,0:24:0.16:0,0,616	0/0:46,0:37:99:0,111,2026	0/0:22,0:22:33.11:0,33,630	0/0:34,0:34:87.24:0,87,1555	0/0:19,0:19:45.12:0,45,824	0/0:35,0:33:71.42:0,71,1262	0/0:23,0:22:66.18:0,66,1212	0/0:14,0:12:36.08:0,36,620	0/0:19,0:17:39.13:0,39,751	0/1:20,10:30:99:224,0,312	0/0:27,0:19:43.74:0,44,915	0/0:29,0:26:35.36:0,35,895	0/0:30,0:28:77.72:0,78,1387	0/0:22,0:22:60.08:0,60,994	0/0:46,0:43:96.20:0,96,1818	0/0:12,0:12:36.12:0,36,664	0/0:16,0:14:15.07:0,15,663	0/0:32,0:29:78.18:0,78,1400	0/0:23,0:23:60.19:0,60,1106	0/0:24,0:22:63.22:0,63,1197	0/0:32,0:30:75.19:0,75,1360	0/0:24,0:22:57.20:0,57,1082
chr10	92336484	.	T	TTATTA	1930.62	PASS	AB=0.628;AC=23;AF=0.411;AN=56;BaseQRankSum=12.753;DP=359;FS=2.601;HRun=0;HaplotypeScore=79.2169;InbreedingCoeff=-0.4540;MQ=72.61;MQ0=0;MQRankSum=-0.111;QD=7.29;ReadPosRankSum=4.666;VQSLOD=1.4745;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:15.61:0,16,1468	0/0:5,0:5:15.05:0,15,280	0/0:7,0:7:9.03:0,9,121	0/1:5,0:5:20.77:21,0,30	0/1:4,0:12:81.46:81,0,90	0/1:5,1:24:28.51:814,0,29	0/0:3,0:3:9:0,9,100	0/1:16,0:38:99:153,0,411	0/1:4,0:11:36.94:37,0,121	0/1:4,0:15:90.60:91,0,133	0/1:5,0:13:47.82:48,0,133	0/1:1,0:8:25.34:46,0,25	0/1:4,0:13:40.07:40,0,99	0/1:2,0:7:30.74:31,0,64	0/0:7,0:7:21.06:0,21,384	0/1:3,0:3:39.49:49,0,39	0/0:35,0:35:99:0,102,2113	0/1:1,0:10:28.16:34,0,28	0/1:10,0:16:50.30:50,0,207	0/1:4,0:11:44.68:45,0,133	0/0:8,0:8:8.97:0,9,260	1/1:0,0:1:2.88:15,3,0	0/1:1,0:5:25.34:46,0,25	0/1:1,0:5:21.47:21,0,31	1/1:1,0:15:23:121,23,0	0/1:3,0:18:56:163,0,56	0/1:3,0:16:76.65:77,0,90	0/1:4,0:19:99:112,0,110
chr10	92338009	.	CTCT	C	881.20	PASS	AB=1.000;AC=21;AF=0.389;AN=54;BaseQRankSum=3.162;DP=446;FS=1.221;HRun=0;HaplotypeScore=121.5140;InbreedingCoeff=-0.2492;MQ=37.44;MQ0=36;MQRankSum=-3.177;QD=3.42;ReadPosRankSum=-2.572;VQSLOD=1.5869;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:34:90.17:0,90,1687	1/1:6,1:7:3.18:73,3,0	0/0:3,0:1:0:0,0,0	./.	0/1:19,0:17:8.29:8,0,129	0/0:20,1:21:0.17:0,0,578	0/0:25,1:17:0.34:0,0,400	0/0:36,0:23:60.15:0,60,984	0/1:17,0:14:52.31:54,0,52	0/0:17,0:14:7.86:0,8,151	0/1:8,0:7:15.96:16,0,38	0/1:13,0:11:10.82:54,0,11	0/1:17,0:14:36.88:115,0,37	0/1:15,0:10:22.20:22,0,89	1/1:2,13:14:13.77:175,14,0	0/0:14,0:13:15.04:0,15,259	1/1:10,1:9:11.93:100,12,0	0/1:16,0:14:41.35:41,0,91	0/0:11,0:8:3.02:0,3,100	0/1:13,0:12:58.59:78,0,59	0/1:24,0:20:25.84:65,0,26	0/0:20,0:17:18.74:0,19,97	0/1:15,0:10:4.21:4,0,110	0/1:14,0:13:44.38:61,0,44	0/1:12,0:12:41.53:42,0,87	0/1:22,0:19:79.77:80,0,80	0/1:9,0:9:26.54:42,0,27	0/1:11,0:10:2.32:2,0,111
chr10	92338036	.	CTCCTCT	C	4712.31	PASS	AB=0.951;AC=36;AF=0.692;AN=52;BaseQRankSum=2.008;DP=559;FS=69.731;HRun=0;HaplotypeScore=146.4788;InbreedingCoeff=-0.2795;MQ=27.23;MQ0=117;MQRankSum=-3.543;QD=9.06;ReadPosRankSum=-0.257;VQSLOD=1.3816;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:30:77.90:0,78,2021	0/1:16,0:16:30.81:73,0,31	./.	./.	1/1:28,1:23:9.12:242,9,0	1/1:17,5:19:21.29:404,21,0	0/1:30,1:15:74.50:75,0,106	0/1:39,0:15:51.55:212,0,52	1/1:18,0:9:17.97:194,18,0	0/1:21,0:16:99:192,0,121	0/1:18,0:13:9.67:10,0,28	1/1:16,5:12:9.03:158,9,0	1/1:14,0:10:17.99:281,18,0	1/1:17,0:8:10.53:166,11,0	1/1:20,0:15:12:226,12,0	1/1:12,8:18:1.35:157,1,0	0/1:13,0:8:1.09:120,0,1	0/1:12,5:11:27.80:213,0,28	0/1:18,0:7:75.73:118,0,76	0/1:18,1:18:94.20:165,0,94	0/1:35,0:15:93.04:124,0,93	0/1:19,9:22:51.69:319,0,52	1/1:17,2:14:0.98:253,1,0	1/1:13,0:10:5.89:121,6,0	0/1:20,1:17:0.65:333,0,1	0/1:25,0:17:55.87:240,0,56	1/1:12,0:9:14.44:122,14,0	0/1:10,1:9:39.74:196,0,40
chr10	92338039	.	CTCT	C	3141.06	PASS	AB=0.922;AC=34;AF=0.654;AN=52;BaseQRankSum=1.923;DP=565;FS=51.576;HRun=0;HaplotypeScore=138.4991;InbreedingCoeff=-0.3987;MQ=26.95;MQ0=118;MQRankSum=-2.784;QD=5.96;ReadPosRankSum=-1.558;VQSLOD=1.1695;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:29:69.51:0,70,1385	0/1:16,0:16:42.19:61,0,42	./.	./.	1/1:25,4:23:9.41:242,9,0	0/1:21,0:18:12.14:150,0,12	0/1:32,0:15:23.64:24,0,62	0/1:40,2:18:99:172,0,111	1/1:17,2:9:17.94:214,18,0	0/1:17,2:15:99:108,0,122	0/1:18,0:13:11.91:12,0,15	1/1:19,1:12:8.89:85,9,0	1/1:9,5:10:18.45:201,18,0	1/1:16,2:7:5.08:95,5,0	1/1:18,2:14:3.12:200,3,0	0/1:22,0:18:32.95:33,0,70	0/1:12,1:8:5.10:91,0,5	0/1:15,2:11:6.85:86,0,7	0/1:14,2:6:52.41:125,0,52	0/1:19,1:18:46.13:206,0,46	0/1:32,3:15:58.05:95,0,58	0/1:22,6:22:58.11:184,0,58	1/1:16,2:14:0.76:103,1,0	1/1:8,1:10:5.95:48,6,0	0/1:22,2:20:11.39:157,0,11	0/1:16,10:17:28.72:239,0,29	1/1:13,1:11:17.64:188,18,0	0/1:8,2:9:39.93:174,0,40
chr10	92338045	.	CTCCTCCTCT	C	2071.61	PASS	AB=0.991;AC=27;AF=0.519;AN=52;BaseQRankSum=1.311;DP=603;FS=45.890;HRun=0;HaplotypeScore=188.2078;InbreedingCoeff=-0.4257;MQ=26.00;MQ0=127;MQRankSum=-1.778;QD=4.07;ReadPosRankSum=-0.343;VQSLOD=1.1600;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:32:78.11:0,78,2192	0/1:18,0:17:54.37:69,0,54	./.	./.	1/1:27,0:21:11.29:121,11,0	0/1:26,0:22:99:101,0,136	0/0:34,0:14:9.40:0,9,136	0/1:44,0:21:74.69:99,0,75	1/1:14,5:10:11.69:155,12,0	0/1:19,0:14:2.27:2,0,243	0/0:19,0:14:7.62:0,8,39	0/1:22,0:13:21.69:22,0,36	0/1:15,0:10:4.28:4,0,22	0/1:18,0:6:4.58:5,0,38	1/1:20,0:14:16.97:76,17,0	0/1:25,0:20:62.19:62,0,124	0/1:16,0:9:21:53,0,21	0/1:18,0:11:26.79:27,0,81	0/1:16,1:7:33.89:157,0,34	0/1:20,2:20:76.33:316,0,76	0/1:35,1:16:80.70:175,0,81	0/1:31,0:24:75.86:76,0,97	0/1:18,0:13:6.44:38,0,6	0/1:12,0:9:27.88:28,0,30	0/1:31,0:27:85.27:118,0,85	0/1:30,0:21:99:183,0,131	1/1:15,1:13:4.95:237,5,0	0/1:8,0:6:30.86:105,0,31
chr10	92338685	.	TA	T	1680.79	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.063;DP=522;FS=3.167;HRun=6;HaplotypeScore=66.0272;InbreedingCoeff=0.9274;MQ=59.89;MQ0=1;MQRankSum=0.651;QD=24.36;ReadPosRankSum=1.499;VQSLOD=3.5794;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.23:0,87,1110	1/1:2,1:3:5.97:52,6,0	0/0:23,1:16:43.11:0,43,471	0/0:15,0:9:20.57:0,21,216	0/0:25,0:25:75.20:0,75,934	0/0:16,0:16:36.11:0,36,461	0/0:16,0:16:39.11:0,39,498	0/0:32,0:31:84.24:0,84,1046	0/0:22,0:22:54.18:0,54,707	0/0:18,0:16:42.09:0,42,522	0/0:5,0:5:14.96:0,15,174	0/0:24,0:24:69.20:0,69,880	0/0:13,0:13:30.10:0,30,395	0/0:12,0:12:33.11:0,33,434	1/1:2,26:28:78.18:830,78,0	0/0:20,0:20:45.14:0,45,579	1/1:4,34:38:87.22:934,87,0	0/0:19,0:17:33.07:0,33,575	0/0:24,0:23:69.21:0,69,882	0/0:16,0:16:42.07:0,42,526	0/0:15,0:15:33.09:0,33,418	0/0:15,0:15:41.88:0,42,481	0/0:18,0:18:45.06:0,45,558	0/0:25,0:25:63.16:0,63,803	0/0:5,0:5:15.05:0,15,197	0/0:18,0:18:48.16:0,48,631	0/0:20,1:21:27.01:0,27,639	0/0:5,0:5:9.03:0,9,118
chr10	92338700	.	AAAGG	A	2713.66	PASS	AB=0.563;AC=25;AF=0.500;AN=50;BaseQRankSum=-1.387;DP=532;FS=34.206;HRun=0;HaplotypeScore=97.7784;InbreedingCoeff=0.8119;MQ=59.17;MQ0=9;MQRankSum=2.147;QD=11.17;ReadPosRankSum=1.039;VQSLOD=1.1231;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:24.06:0,24,468	1/1:1,1:2:3.01:46,3,0	./.	./.	0/0:25,0:25:36.12:0,36,812	1/1:7,8:15:15.05:228,15,0	1/1:10,6:16:3.01:46,3,0	./.	1/1:15,8:23:12.04:182,12,0	0/0:19,0:17:15.05:0,15,252	0/0:3,0:10:12.02:0,12,192	0/0:23,0:22:18.02:0,18,256	0/0:13,0:13:11.95:0,12,110	0/0:11,0:14:12.04:0,12,177	1/1:22,5:27:27.06:349,27,0	1/1:10,10:20:18.06:274,18,0	1/1:28,6:34:15.02:204,15,0	0/0:17,0:16:14.99:0,15,176	1/1:16,11:24:36.03:429,36,0	1/1:7,9:16:18.06:274,18,0	1/1:7,6:13:9.03:137,9,0	0/0:11,0:19:21:0,21,333	0/0:13,0:18:9.03:0,9,170	0/0:32,0:32:32.98:0,33,444	0/0:9,0:9:15.04:0,15,244	1/1:8,11:18:33.06:435,33,0	1/1:12,9:21:15.05:228,15,0	0/1:2,7:9:17:82,0,17
chr10	92338718	.	A	AGGAAGGAA	2348.56	PASS	AB=1.000;AC=20;AF=0.385;AN=52;BaseQRankSum=-6.460;DP=502;FS=18.663;HRun=0;HaplotypeScore=128.1553;InbreedingCoeff=0.7521;MQ=55.22;MQ0=14;MQRankSum=-3.531;QD=12.43;ReadPosRankSum=-3.028;VQSLOD=0.8186;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:21.05:0,21,405	0/0:4,0:4:3.01:0,3,55	./.	./.	0/0:24,0:24:36.11:0,36,752	0/0:18,0:18:15.05:0,15,279	0/0:22,0:22:3.01:0,3,56	0/1:17,0:16:0:0,0,0	0/0:19,0:19:12.04:0,12,223	1/1:19,0:17:12.02:151,12,0	1/1:13,0:13:12.04:355,12,0	1/1:21,0:20:13.39:374,13,0	1/1:10,5:16:3.01:95,3,0	0/1:15,0:15:2.02:116,0,2	0/0:23,0:23:22.30:0,22,321	0/0:20,0:20:18.06:0,18,335	0/0:28,0:28:12:0,12,222	1/1:15,0:13:3.01:95,3,0	0/0:29,0:23:27.04:0,27,424	0/0:19,0:19:18.06:0,18,332	0/0:17,0:16:9.03:0,9,168	1/1:18,0:17:21.02:524,21,0	1/1:14,0:14:9.01:202,9,0	1/1:33,0:33:27.01:476,27,0	1/1:8,0:8:12.03:144,12,0	0/0:18,0:17:27.07:0,27,444	0/0:21,0:21:14.60:0,15,279	0/0:12,0:12:9:0,9,134
chr10	92338886	.	G	GA	17381.07	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-14.620;DP=703;FS=0.324;HRun=5;HaplotypeScore=63.2587;InbreedingCoeff=0.9855;MQ=83.38;MQ0=0;MQRankSum=-4.187;QD=33.82;ReadPosRankSum=4.553;VQSLOD=4.9003;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1229	1/1:0,7:7:21.07:276,21,0	0/0:30,0:30:75.15:0,75,781	0/0:16,0:16:8.93:0,9,219	1/1:3,24:27:63.20:822,63,0	0/0:30,1:31:72.24:0,72,901	0/0:25,0:25:66.16:0,66,709	0/0:26,0:26:78.18:0,78,826	1/1:2,20:22:51.17:671,51,0	1/1:3,22:25:69.19:887,69,0	1/1:1,20:21:54.18:711,54,0	1/1:1,29:30:81.26:1066,81,0	1/1:0,28:28:78.25:1026,78,0	1/1:2,22:24:66.21:868,66,0	1/1:0,18:18:48.16:632,48,0	0/0:21,0:21:60.15:0,60,645	1/1:4,26:30:49.03:994,49,0	1/1:2,22:23:66.21:868,66,0	1/1:2,31:33:95.79:1212,96,0	1/1:6,23:28:69.22:906,69,0	1/1:0,26:26:69.22:908,69,0	1/1:1,24:25:72.19:927,72,0	1/1:3,32:35:90.76:1184,91,0	1/1:4,24:28:69.22:908,69,0	1/1:4,17:21:42.14:553,42,0	1/1:3,22:25:69.20:875,69,0	1/1:2,27:28:68.99:890,69,0	1/1:0,7:7:15.05:197,15,0
chr10	92338996	.	G	GT	18131.23	PASS	AB=0.964;AC=37;AF=0.661;AN=56;BaseQRankSum=-14.669;DP=750;FS=4.304;HRun=3;HaplotypeScore=67.3412;InbreedingCoeff=0.9460;MQ=86.56;MQ0=0;MQRankSum=-4.061;QD=34.47;ReadPosRankSum=4.966;VQSLOD=5.3565;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1253	0/0:8,0:8:24.07:0,24,288	0/0:20,0:20:57.17:0,57,682	0/0:30,0:30:71.38:0,71,853	1/1:1,35:36:99:1318,99,0	0/0:33,0:33:84.25:0,84,997	0/0:29,0:29:81.22:0,81,948	0/0:30,0:30:84.24:0,84,982	1/1:3,28:31:81.27:1134,81,0	1/1:1,33:34:99:1386,102,0	1/1:1,19:20:54.14:733,54,0	1/1:1,36:37:96.32:1344,96,0	1/1:1,19:20:51.17:714,51,0	1/1:1,32:33:87.29:1218,87,0	0/0:22,0:22:63.19:0,63,755	0/1:26,1:27:3.25:3,0,785	0/0:15,0:15:45.14:0,45,538	1/1:1,15:16:39.13:546,39,0	1/1:0,27:27:81.25:1102,81,0	1/1:3,27:30:78.26:1091,78,0	1/1:1,37:38:90.30:1260,90,0	1/1:3,28:31:81.23:1112,81,0	1/1:1,20:21:51.13:692,51,0	1/1:1,26:27:63.21:882,63,0	1/1:0,19:19:51.17:714,51,0	1/1:3,25:28:75.20:995,75,0	1/1:2,36:38:99:1424,102,0	1/1:1,12:13:33.11:462,33,0
chr10	92339419	.	CT	C	1856.65	PASS	AB=0.941;AC=35;AF=0.625;AN=56;BaseQRankSum=5.933;DP=505;FS=2.200;HRun=8;HaplotypeScore=111.7344;InbreedingCoeff=0.8595;MQ=76.09;MQ0=0;MQRankSum=0.744;QD=6.90;ReadPosRankSum=3.986;VQSLOD=0.8816;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:81.18:0,81,926	1/1:7,0:7:11.06:47,11,0	0/0:19,0:18:17.85:0,18,272	0/1:13,1:11:24.07:27,0,24	0/0:27,0:27:62.94:0,63,461	1/1:7,0:7:10.52:62,11,0	1/1:19,0:19:7.33:110,7,0	1/1:14,0:14:14.78:98,15,0	0/0:25,0:25:62.58:0,63,457	1/1:22,0:22:45.74:271,46,0	1/1:10,1:11:7.75:59,8,0	1/1:11,0:11:26.29:112,26,0	1/1:9,1:10:21.56:98,22,0	1/1:13,0:13:25.29:126,25,0	1/1:19,0:19:32.82:148,33,0	1/1:14,1:15:21.13:88,21,0	1/1:27,0:27:45.03:188,45,0	1/1:13,1:14:24.58:115,25,0	0/0:16,0:16:41.83:0,42,338	0/0:24,0:24:62.26:0,62,464	0/0:14,0:14:26.84:0,27,197	1/1:10,0:10:2.75:31,3,0	1/1:17,0:17:31.20:160,31,0	1/1:18,2:19:29.56:136,30,0	1/1:17,0:17:35.10:197,35,0	0/0:31,0:31:71.61:0,72,539	0/0:30,0:30:81.11:0,81,585	0/0:16,0:16:35.75:0,36,277
chr10	92339426	.	T	TGG	3960.43	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=4.237;DP=506;FS=1.147;HRun=0;HaplotypeScore=124.8703;InbreedingCoeff=0.9703;MQ=71.51;MQ0=0;MQRankSum=-2.611;QD=15.23;ReadPosRankSum=3.981;VQSLOD=3.8714;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1558	1/1:2,0:6:6.41:46,6,0	0/0:20,0:17:17.37:0,17,408	0/0:14,0:8:19.90:0,20,113	0/0:26,0:26:72.02:0,72,724	1/1:8,2:10:12.47:195,12,0	1/1:10,8:18:37.48:585,37,0	1/1:5,8:13:20.97:254,21,0	0/0:27,0:27:62.95:0,63,615	1/1:7,0:24:35.48:265,35,0	1/1:6,1:9:18.23:99,18,0	1/1:1,0:12:29.30:184,29,0	1/1:3,0:10:24.75:135,25,0	1/1:5,0:13:23.32:135,23,0	1/1:0,0:18:43.06:261,43,0	1/1:5,10:15:35.40:505,35,0	1/1:2,0:30:54:322,54,0	1/1:6,0:14:36.75:219,37,0	0/0:18,0:18:52.25:0,52,545	0/0:23,0:23:69:0,69,649	0/0:12,0:12:27.03:0,27,288	1/1:3,0:11:10.51:80,11,0	1/1:4,0:15:34.74:218,35,0	1/1:8,0:21:44.55:251,45,0	1/1:10,0:20:18.58:206,19,0	0/0:27,0:27:80.74:0,81,858	0/0:31,0:31:86.06:0,86,842	0/0:13,0:13:34.78:0,35,349
chr10	92339427	.	T	TG	10353.25	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=1.019;DP=497;FS=2.775;HRun=7;HaplotypeScore=93.8752;InbreedingCoeff=0.8343;MQ=71.12;MQ0=0;MQRankSum=-3.276;QD=23.37;ReadPosRankSum=2.860;VQSLOD=4.8489;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:87.02:0,87,794	1/1:7,0:7:12.03:131,12,0	0/0:20,0:17:40.07:0,40,283	0/1:14,0:8:3.62:4,0,22	1/1:6,20:26:58.86:592,59,0	1/1:4,0:7:17.26:103,17,0	1/1:12,0:18:46.16:265,46,0	1/1:12,0:13:17.38:100,17,0	1/1:3,24:27:59.85:685,60,0	1/1:23,0:23:45.51:474,46,0	1/1:10,0:10:21.39:194,21,0	1/1:11,0:12:33.06:371,33,0	1/1:11,0:11:29.99:319,30,0	1/1:12,0:12:29.99:320,30,0	1/1:16,0:16:45.11:507,45,0	1/1:13,0:14:31.44:173,31,0	1/1:24,0:25:60.10:667,60,0	1/1:11,0:13:36.02:383,36,0	1/1:5,14:20:44.91:462,45,0	1/1:6,15:22:56.96:610,57,0	1/1:2,10:12:21.06:250,21,0	1/1:11,0:11:33.04:349,33,0	1/1:16,0:16:35.59:387,36,0	1/1:23,0:22:60.50:636,60,0	1/1:18,0:18:47.95:483,48,0	1/1:7,21:28:68.92:757,69,0	1/1:8,24:32:75.03:841,75,0	1/1:8,4:13:30:288,30,0
chr10	92339464	.	TAAA	T	5632.03	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=1.698;DP=503;FS=2.174;HRun=17;HaplotypeScore=113.2494;InbreedingCoeff=0.9438;MQ=65.43;MQ0=2;MQRankSum=-4.037;QD=16.09;ReadPosRankSum=4.735;VQSLOD=3.6768;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:39:97.36:0,97,1189	0/0:7,0:8:21.03:0,21,275	0/0:27,0:12:17.98:0,18,193	0/0:21,0:15:23.92:0,24,300	1/1:11,13:24:38.54:378,39,0	1/1:4,9:13:20.85:216,21,0	1/1:4,11:16:29.80:294,30,0	0/0:8,0:13:8.44:0,8,35	1/1:8,8:17:26.61:263,27,0	1/1:13,9:23:26.48:258,26,0	1/1:1,8:9:17.79:185,18,0	1/1:9,3:12:14.70:150,15,0	1/1:1,9:10:24.01:246,24,0	1/1:3,8:12:23.80:227,24,0	0/0:14,0:16:38.99:0,39,521	1/1:9,9:18:26.51:277,27,0	0/0:26,0:28:56.64:0,57,843	1/1:6,10:17:26.58:263,27,0	1/1:7,5:13:13.44:151,13,0	1/1:6,13:20:32.55:325,33,0	1/1:10,4:15:23.77:226,24,0	1/1:3,8:11:24.04:246,24,0	1/1:5,12:17:10.03:277,10,0	1/1:10,11:21:25.20:273,25,0	1/1:6,13:21:13.17:303,13,0	1/1:11,12:26:43.15:432,43,0	1/1:5,14:20:40.41:428,40,0	1/1:5,7:14:6.64:213,7,0
chr10	92339479	.	AAAG	A	1083.16	PASS	AB=0.987;AC=22;AF=0.393;AN=56;BaseQRankSum=11.837;DP=491;FS=22.574;HRun=0;HaplotypeScore=108.2924;InbreedingCoeff=-0.4664;MQ=70.20;MQ0=3;MQRankSum=-6.353;QD=3.31;ReadPosRankSum=9.387;VQSLOD=-0.6527;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:90.31:0,90,1198	0/0:8,0:8:20.87:0,21,271	0/0:35,0:19:44.50:0,44,392	0/0:18,0:11:27:0,27,341	0/1:20,0:20:76.88:77,0,102	0/1:15,0:15:27.40:27,0,112	0/1:14,0:14:12.80:67,0,13	0/0:13,0:13:28.94:0,29,190	0/1:12,0:12:15.32:88,0,15	0/1:21,0:21:6.21:6,0,191	0/1:10,0:10:36.25:36,0,44	0/1:7,1:8:52.09:58,0,52	0/1:13,0:13:44.61:96,0,45	0/1:13,1:14:56.11:96,0,56	0/0:18,0:18:48.04:0,48,668	0/1:15,0:15:35.67:36,0,108	0/0:31,0:31:76.86:0,77,1014	0/1:14,0:14:51.66:61,0,52	0/1:11,0:11:16.05:16,0,109	0/1:20,1:21:63.85:64,0,119	0/1:13,0:13:23.44:23,0,74	0/1:10,0:10:7.55:64,0,8	0/1:20,0:20:45.80:46,0,106	0/1:20,1:20:70.08:70,0,74	0/1:22,0:22:50.54:51,0,128	0/1:26,0:26:44.01:44,0,178	0/1:18,0:18:25.18:163,0,25	1/1:9,0:9:15.45:59,15,0
chr10	92339637	.	TA	T	5662.87	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=5.253;DP=482;FS=2.107;HRun=8;HaplotypeScore=84.1666;InbreedingCoeff=0.9847;MQ=62.04;MQ0=1;MQRankSum=-3.094;QD=23.21;ReadPosRankSum=-0.251;VQSLOD=5.2174;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.26:0,90,1073	0/0:6,0:6:18.06:0,18,217	0/0:8,0:7:14.99:0,15,149	0/0:11,0:7:8.21:0,8,65	1/1:7,16:23:57.05:528,57,0	1/1:0,16:16:42.07:405,42,0	1/1:1,11:12:27.04:261,27,0	1/1:9,22:31:78.08:728,78,0	1/1:7,18:25:60.06:560,60,0	0/0:22,0:22:62.70:0,63,558	0/0:17,0:17:46.82:0,47,353	0/0:18,0:18:44.33:0,44,344	0/0:16,0:16:46.78:0,47,360	0/0:20,0:20:47.87:0,48,334	0/0:12,0:12:35.10:0,35,386	1/1:3,18:21:36.06:347,36,0	0/0:7,0:7:21.06:0,21,247	0/0:19,0:19:47.79:0,48,399	1/1:5,14:19:54.05:500,54,0	1/1:6,11:17:39.04:369,39,0	1/1:0,7:7:21.03:198,21,0	0/0:8,0:8:20.82:0,21,148	0/0:14,0:14:22.85:0,23,235	0/0:16,0:16:37.60:0,38,288	0/0:12,0:12:32.37:0,32,236	1/1:11,22:33:45.39:689,45,0	1/1:4,17:21:60.02:544,60,0	1/1:0,19:19:57.07:534,57,0
chr10	92339646	.	GA	G	8614.10	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=1.661;DP=481;FS=6.979;HRun=8;HaplotypeScore=72.7753;InbreedingCoeff=0.9879;MQ=61.38;MQ0=1;MQRankSum=1.060;QD=24.33;ReadPosRankSum=1.842;VQSLOD=5.6760;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.08:0,87,1007	0/0:7,0:7:18.02:0,18,202	0/0:6,0:5:10.85:0,11,82	0/0:10,0:6:14.88:0,15,145	1/1:1,19:20:48.04:443,48,0	0/0:17,0:17:46.17:0,46,308	0/0:12,0:12:29.88:0,30,238	1/1:5,29:34:87.11:818,87,0	1/1:3,18:21:60.07:562,60,0	1/1:2,22:24:66.09:632,66,0	1/1:1,15:16:45.07:435,45,0	1/1:1,18:19:39.06:377,39,0	1/1:2,16:18:42.07:406,42,0	1/1:1,19:20:45.07:434,45,0	0/0:14,0:14:39.06:0,39,449	0/0:22,1:23:21.57:0,22,363	0/0:8,0:8:24.04:0,24,274	1/1:2,18:20:39.06:377,39,0	1/1:2,16:18:48.05:450,48,0	1/1:1,14:15:39.05:369,39,0	1/1:2,6:8:21.03:199,21,0	1/1:0,9:9:27.04:259,27,0	1/1:1,12:13:36.05:343,36,0	1/1:2,14:16:33.05:319,33,0	1/1:0,11:11:33.05:319,33,0	1/1:3,27:30:87.09:816,87,0	1/1:2,19:21:51.03:465,51,0	1/1:2,19:21:63.08:592,63,0
chr10	92340048	.	A	AGTGT	13351.67	PASS	AB=0.807;AC=35;AF=0.625;AN=56;BaseQRankSum=1.581;DP=691;FS=1.473;HRun=0;HaplotypeScore=167.6653;InbreedingCoeff=0.4664;MQ=58.17;MQ0=1;MQRankSum=-3.275;QD=25.53;ReadPosRankSum=1.063;VQSLOD=4.5369;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:39:75.24:0,75,1215	0/0:10,0:10:30.10:0,30,500	0/0:24,0:21:40.47:0,40,581	0/0:19,0:15:30.05:0,30,470	1/1:7,0:20:45.11:274,45,0	0/0:25,0:24:27.98:0,28,723	0/1:43,0:43:47.62:48,0,1263	0/1:45,0:44:99:163,0,907	0/1:11,0:25:53.95:139,0,54	1/1:13,13:27:60.08:1337,60,0	1/1:4,14:20:44.62:993,45,0	1/1:13,21:35:77.99:1773,78,0	1/1:2,16:19:54.19:1315,54,0	1/1:8,10:19:48.10:1027,48,0	0/0:16,0:18:42.11:0,42,636	0/1:30,0:30:73.32:73,0,923	0/0:31,0:32:72.24:0,72,1175	1/1:7,22:30:56.93:1348,57,0	1/1:10,0:14:31.31:180,31,0	1/1:3,0:13:27.50:124,27,0	0/1:13,0:27:46.68:188,0,47	1/1:6,12:18:36.12:872,36,0	1/1:5,8:15:26.81:551,27,0	1/1:19,14:33:50.86:1159,51,0	1/1:7,13:20:45.15:1063,45,0	1/1:11,1:41:77.02:568,77,0	0/1:6,0:15:22.70:116,0,23	0/1:7,0:11:40.67:41,0,129
chr10	92340086	.	A	AGT	12006.65	PASS	AB=0.670;AC=29;AF=0.518;AN=56;BaseQRankSum=-6.019;DP=749;FS=7.544;HRun=0;HaplotypeScore=152.3798;InbreedingCoeff=0.1055;MQ=56.61;MQ0=1;MQRankSum=-1.069;QD=24.60;ReadPosRankSum=1.768;VQSLOD=5.4507;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:68.96:0,69,758	1/1:2,10:12:33.11:527,33,0	0/0:31,0:28:45.03:0,45,462	0/0:23,0:18:9.09:0,9,157	1/1:5,13:18:36.11:536,36,0	0/0:33,0:32:57.15:0,57,664	0/0:57,0:61:99:0,141,1609	0/0:53,0:54:99:0,102,1170	0/1:7,19:26:39.27:885,0,39	1/1:14,20:34:59.44:836,59,0	0/1:17,4:21:15.12:240,0,15	1/1:16,17:33:54.18:864,54,0	0/1:9,10:20:44.41:456,0,44	1/1:6,12:18:25.20:604,25,0	0/1:8,16:25:30.19:536,0,30	0/0:25,1:27:8.83:0,9,581	1/1:6,30:36:84.29:1348,84,0	0/1:19,8:28:14.73:385,0,15	0/1:9,6:14:2.41:292,0,2	1/1:5,10:15:21.07:336,21,0	0/1:11,19:29:11.87:581,0,12	0/1:13,7:21:28.87:439,0,29	0/1:8,10:18:39.36:387,0,39	0/1:10,23:34:15.16:747,0,15	0/1:4,13:17:6.06:398,0,6	0/1:20,22:42:24.54:929,0,25	0/1:8,4:12:12.08:303,0,12	1/1:6,7:13:24.08:380,24,0
chr10	92340251	.	TA	T	10154.88	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=11.357;DP=617;FS=9.705;HRun=10;HaplotypeScore=118.0167;InbreedingCoeff=0.8949;MQ=76.73;MQ0=0;MQRankSum=-1.676;QD=20.15;ReadPosRankSum=0.705;VQSLOD=4.0688;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:35:96.08:0,96,1032	0/0:7,0:7:15.04:0,15,166	0/0:18,0:17:18.98:0,19,142	0/1:11,0:10:7.98:8,0,9	1/1:3,19:23:59.22:479,59,0	1/1:4,15:19:41.98:364,42,0	1/1:3,17:21:50.99:442,51,0	1/1:2,22:24:65.98:572,66,0	1/1:3,25:28:71.42:600,71,0	1/1:4,33:37:97.97:824,98,0	1/1:3,15:18:44.77:377,45,0	1/1:5,18:23:59.07:487,59,0	1/1:3,17:20:41.99:364,42,0	1/1:2,25:27:74.96:646,75,0	0/0:24,0:25:65.97:0,66,683	1/1:3,18:21:50.99:442,51,0	0/0:28,0:28:75.10:0,75,793	1/1:2,12:14:29.99:260,30,0	1/1:2,15:17:44.70:370,45,0	1/1:9,15:24:50.32:414,50,0	1/1:4,23:27:65.98:572,66,0	1/1:7,15:22:47.48:399,47,0	1/1:4,21:25:65.48:555,65,0	1/1:3,28:32:75.45:651,75,0	1/1:0,24:24:50.99:442,51,0	1/1:7,15:22:44.98:390,45,0	1/1:4,18:22:47.98:416,48,0	1/1:0,3:3:9:78,9,0
chr10	92340630	.	C	CTT	5212.08	PASS	AB=0.723;AC=48;AF=0.857;AN=56;BaseQRankSum=-0.341;DP=640;FS=1.161;HRun=12;HaplotypeScore=106.3230;InbreedingCoeff=0.0452;MQ=77.55;MQ0=3;MQRankSum=0.185;QD=8.59;ReadPosRankSum=-0.105;VQSLOD=2.9765;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:33:55.62:0,56,524	1/1:2,6:8:18.01:229,18,0	0/1:26,0:23:21.47:21,0,58	0/1:22,0:20:35.33:35,0,75	1/1:8,1:24:1.67:114,2,0	1/1:5,15:21:29.53:347,30,0	1/1:16,9:27:54.76:612,55,0	1/1:14,13:33:42.99:500,43,0	0/1:10,1:25:48.81:85,0,49	1/1:9,1:22:25.47:120,25,0	1/1:3,1:18:6.66:131,7,0	1/1:10,3:38:4.42:227,4,0	1/1:2,0:14:22.96:94,23,0	1/1:3,0:14:14.97:53,15,0	1/1:5,22:27:51.05:646,51,0	1/1:5,11:17:19.87:247,20,0	1/1:2,15:17:36.12:491,36,0	0/1:5,0:20:38.13:38,0,58	1/1:8,2:28:34.45:192,34,0	1/1:4,0:23:6.07:102,6,0	1/1:4,1:23:34.39:174,34,0	0/1:6,2:18:4.08:113,0,4	1/1:6,0:27:3.15:79,3,0	0/1:8,0:31:37.28:71,0,37	1/1:4,1:14:0.86:96,1,0	1/1:9,1:31:43.26:212,43,0	1/1:4,0:19:23.43:106,23,0	1/1:1,0:14:22.46:78,22,0
chr10	92341047	.	TAAAG	T	5800.38	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.639;DP=694;FS=0.825;HRun=0;HaplotypeScore=115.2013;InbreedingCoeff=0.9987;MQ=81.74;MQ0=0;MQRankSum=-5.224;QD=52.26;ReadPosRankSum=-1.458;VQSLOD=5.1842;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,3636	0/0:15,0:15:45.15:0,45,1252	0/0:19,0:19:49.84:0,50,1206	0/0:19,0:19:53.97:0,54,1380	0/0:10,0:10:30.10:0,30,803	1/1:0,19:19:51.18:1018,51,0	1/1:1,35:36:90.31:1779,90,0	1/1:0,28:28:84.24:1537,84,0	0/0:29,0:29:84.29:0,84,2351	0/0:23,0:23:69.24:0,69,1928	0/0:28,0:28:81.23:0,81,2118	0/0:29,0:29:87.28:0,87,2315	0/0:30,0:30:90.31:0,90,2431	0/0:27,0:27:81.28:0,81,2222	0/0:27,0:27:81.27:0,81,2209	1/1:0,28:28:75.26:1465,75,0	0/0:28,0:28:84.29:0,84,2254	0/0:26,0:26:78.27:0,78,2111	0/0:20,0:20:57.17:0,57,1516	0/0:18,0:18:54.18:0,54,1446	0/0:44,0:44:99:0,129,3435	0/0:18,0:18:54.19:0,54,1506	0/0:18,0:18:51.01:0,51,1357	0/0:28,0:28:84.29:0,84,2285	0/0:20,0:20:57.20:0,57,1595	0/0:27,0:27:81.27:0,81,2148	0/0:27,0:25:78.26:0,78,2124	0/0:7,0:7:21.07:0,21,494
chr10	92342971	.	A	AC	752.81	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.723;DP=382;FS=1.757;HRun=5;HaplotypeScore=49.0255;InbreedingCoeff=0.6893;MQ=81.84;MQ0=0;MQRankSum=0.631;QD=31.37;ReadPosRankSum=-4.181;VQSLOD=2.2494;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:83:0,83,865	0/0:5,0:5:12.03:0,12,128	0/0:13,0:11:12.02:0,12,195	0/0:11,0:13:17.97:0,18,176	0/0:7,0:7:14.80:0,15,127	0/0:6,0:6:18.05:0,18,193	0/0:19,0:19:51.11:0,51,538	1/1:2,22:23:66.20:847,66,0	0/0:13,0:13:27.06:0,27,290	0/0:9,0:9:24.06:0,24,258	0/0:2,0:2:6.02:0,6,64	0/0:18,0:18:48.11:0,48,507	0/0:7,0:7:21.05:0,21,225	0/0:13,0:13:39.10:0,39,419	0/0:7,0:7:12.03:0,12,129	0/0:13,0:13:39.08:0,39,411	0/0:38,0:38:99:0,111,1191	0/0:25,0:25:69.14:0,69,730	0/0:11,0:11:27.07:0,27,289	0/0:10,0:10:21.05:0,21,225	0/0:31,0:31:84.21:0,84,902	0/0:11,0:11:30.08:0,30,322	0/0:3,0:3:6.01:0,6,58	0/0:19,0:19:45.11:0,45,484	0/0:13,0:13:34.64:0,35,359	0/0:11,0:11:33.07:0,33,342	0/0:5,0:5:12.03:0,12,129	0/0:3,0:3:9.02:0,9,97
chr10	92343263	.	CG	C	1464.70	PASS	AB=1.000;AC=9;AF=0.250;AN=36;BaseQRankSum=0.038;DP=147;FS=1.591;HRun=2;HaplotypeScore=24.8708;InbreedingCoeff=0.6771;MQ=58.66;MQ0=0;MQRankSum=-0.466;QD=24.01;ReadPosRankSum=-0.155;VQSLOD=3.2191;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:21.07:0,21,313	0/0:1,0:1:3.01:0,3,45	./.	./.	1/1:0,2:2:6.02:76,6,0	./.	0/0:22,0:22:66.21:0,66,949	0/0:2,0:2:6.01:0,6,72	./.	0/0:7,0:7:20.60:0,21,140	0/1:1,0:1:0:0,0,0	./.	./.	0/0:3,0:3:8.93:0,9,65	./.	0/0:1,0:1:3.01:0,3,45	0/0:9,0:9:23.97:0,24,330	0/0:8,0:8:23.73:0,24,168	1/1:0,4:4:9.03:116,9,0	./.	1/1:1,49:50:99:1282,100,0	0/0:4,0:4:5.92:0,6,41	0/0:1,0:1:2.90:0,3,16	0/0:15,0:15:33.26:0,33,261	0/0:4,0:4:11.70:0,12,71	1/1:0,4:4:9.03:117,9,0	./.	./.
chr10	92344041	.	ACC	A	2380.45	PASS	AB=0.680;AC=37;AF=0.661;AN=56;BaseQRankSum=-2.507;DP=217;FS=32.287;HRun=11;HaplotypeScore=34.3444;InbreedingCoeff=0.3242;MQ=80.45;MQ0=1;MQRankSum=3.954;QD=14.34;ReadPosRankSum=2.671;VQSLOD=-0.1075;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:14,1:17:8.39:8,0,221	1/1:3,1:4:6.01:61,6,0	0/0:9,0:7:4.95:0,5,70	0/0:8,0:8:7.15:0,7,104	0/1:2,1:5:18.55:19,0,58	0/1:6,1:7:22.96:23,0,56	0/0:19,0:19:48.15:0,48,716	1/1:2,4:6:12.02:122,12,0	0/1:1,1:10:16.45:16,0,27	1/1:2,5:7:15.01:152,15,0	1/1:0,4:4:12.03:128,12,0	1/1:3,8:11:21.04:217,21,0	1/1:1,2:3:6.01:64,6,0	1/1:1,10:10:24.06:255,24,0	1/1:0,4:4:9.02:96,9,0	0/0:5,0:5:15:0,15,148	1/1:3,15:18:42.09:447,42,0	1/1:2,9:11:24.06:255,24,0	0/1:2,1:6:15.18:21,0,15	1/1:0,1:1:3.01:32,3,0	0/1:9,0:14:8.47:8,0,51	1/1:0,3:3:9.02:96,9,0	1/1:0,7:8:20.79:203,21,0	1/1:0,8:8:21.05:223,21,0	1/1:0,2:2:6.02:64,6,0	0/1:1,2:6:12.22:50,0,12	0/0:1,0:7:12.58:0,13,44	0/0:0,0:2:5.49:0,5,33
chr10	92344944	.	T	TCCC	192.69	PASS	AB=0.782;AC=11;AF=0.196;AN=56;BaseQRankSum=4.578;DP=416;FS=2.970;HRun=0;HaplotypeScore=70.7141;InbreedingCoeff=0.2581;MQ=80.24;MQ0=4;MQRankSum=-3.353;QD=1.55;ReadPosRankSum=0.532;VQSLOD=1.5793;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:71.70:0,72,989	0/1:3,0:7:4.80:5,0,14	0/0:17,0:19:48.61:0,49,825	0/0:18,0:16:39.09:0,39,647	0/0:9,0:9:21.52:0,22,250	1/1:9,0:9:11.58:93,12,0	0/1:6,7:16:5.40:11,0,5	0/0:31,0:31:90.28:0,90,1468	0/0:13,0:13:11.38:0,11,84	0/0:13,0:13:35.91:0,36,505	0/0:4,0:4:10.14:0,10,99	0/0:27,0:27:45.27:0,45,491	0/0:11,0:11:26.99:0,27,309	0/0:15,0:15:11.83:0,12,140	0/1:8,0:22:17.57:18,0,59	1/1:11,0:11:20.23:170,20,0	0/1:7,0:18:25.94:26,0,77	0/0:15,0:14:11.61:0,12,168	0/1:14,0:14:1.29:1,0,298	0/1:10,0:10:5.87:6,0,270	0/0:28,0:27:39.89:0,40,532	0/0:10,0:10:18.40:0,18,214	0/0:5,0:5:6.89:0,7,77	0/0:13,0:13:36.47:0,36,390	0/0:11,0:11:30.95:0,31,358	0/0:11,0:11:26.97:0,27,345	0/1:14,0:14:6.84:7,0,116	0/0:3,0:3:4.26:0,4,51
chr10	92344953	.	C	CCCCCG	2814.96	PASS	AB=0.885;AC=40;AF=0.714;AN=56;BaseQRankSum=1.945;DP=465;FS=17.957;HRun=0;HaplotypeScore=129.3481;InbreedingCoeff=0.5846;MQ=82.08;MQ0=4;MQRankSum=-5.454;QD=8.43;ReadPosRankSum=-5.257;VQSLOD=-0.5776;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:17.71:0,18,360	0/0:9,0:9:11.84:0,12,121	0/0:23,0:23:63.09:0,63,882	0/0:18,0:16:47.84:0,48,631	1/1:4,0:9:8.97:102,9,0	1/1:12,0:11:0.89:63,1,0	0/1:17,0:17:12.09:12,0,23	0/0:25,0:25:54.06:0,54,844	1/1:3,0:13:8.97:98,9,0	1/1:14,0:14:29.65:312,30,0	1/1:3,0:3:2.88:15,3,0	1/1:14,7:34:18.95:274,19,0	1/1:9,1:19:14.95:121,15,0	1/1:6,5:21:1.24:3,1,0	0/0:24,0:22:24.08:0,24,237	0/1:11,0:11:7.73:114,0,8	0/1:21,0:21:0.92:1,0,229	1/1:1,7:19:2.38:161,2,0	1/1:5,7:14:24.63:355,25,0	1/1:4,3:12:8.92:124,9,0	1/1:10,1:26:9.23:128,9,0	0/1:2,4:13:0.01:0,0,0	1/1:6,1:7:8.93:75,9,0	1/1:19,0:19:47.73:425,48,0	1/1:10,0:10:20.99:209,21,0	1/1:6,5:15:15.06:99,15,0	1/1:5,7:20:18.40:278,18,0	1/1:3,0:3:3:26,3,0
chr10	92345879	.	GACC	G	11032.34	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=16.252;DP=671;FS=1.308;HRun=0;HaplotypeScore=106.7540;InbreedingCoeff=0.9634;MQ=76.91;MQ0=0;MQRankSum=-5.526;QD=37.15;ReadPosRankSum=0.257;VQSLOD=5.6325;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,2292	0/0:6,0:6:15.05:0,15,339	0/0:23,0:23:66.22:0,66,1416	0/0:20,0:20:51.93:0,52,1193	1/1:2,18:20:39.12:649,39,0	1/1:20,0:20:21.12:423,21,0	1/1:34,0:34:53.22:838,53,0	1/1:3,29:32:84.29:1387,84,0	1/1:1,32:33:93.32:1549,93,0	0/0:24,0:24:72.25:0,72,1619	0/0:14,0:14:39.13:0,39,863	0/0:33,0:33:99:0,99,2224	0/0:28,0:28:81.23:0,81,1779	0/0:22,0:22:66.23:0,66,1488	0/0:37,0:37:99:0,99,2221	1/1:26,1:27:69.18:774,69,0	0/0:39,0:39:99:0,114,2535	0/0:20,0:20:60.21:0,60,1337	1/1:0,19:19:57.13:893,57,0	1/1:3,25:29:69.24:1140,69,0	1/1:3,26:29:63.22:1049,63,0	0/0:23,0:23:69.24:0,69,1524	0/0:16,0:16:48.16:0,48,1077	0/0:17,0:17:45.15:0,45,1020	0/0:18,0:18:51.18:0,51,1157	1/1:2,22:24:1.20:1031,1,0	1/1:0,21:21:63.22:1049,63,0	1/1:0,9:9:15.05:250,15,0
chr10	92345883	.	ACCG	A	8703.23	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=18.244;DP=676;FS=1.287;HRun=0;HaplotypeScore=116.2903;InbreedingCoeff=0.9217;MQ=77.55;MQ0=1;MQRankSum=-7.347;QD=29.60;ReadPosRankSum=1.682;VQSLOD=4.9355;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,2546	0/0:7,0:7:20.96:0,21,432	0/0:22,0:22:66.18:0,66,1464	0/0:19,0:19:55.83:0,56,1269	1/1:18,0:18:39.04:386,39,0	1/1:0,18:18:42.14:779,42,0	1/1:0,32:32:78.20:1405,78,0	1/1:31,0:31:58.13:830,58,0	1/1:32,0:32:93.12:910,93,0	0/0:30,0:30:90.27:0,90,2066	0/0:14,0:14:42.13:0,42,977	0/0:34,0:34:99:0,102,2385	0/0:29,0:29:87.23:0,87,1978	0/0:23,0:23:69.24:0,69,1670	0/0:35,0:35:99:0,105,2480	1/1:1,29:30:69.22:1251,69,0	0/0:39,0:39:99:0,117,2785	0/0:20,0:20:60.18:0,60,1425	1/1:21,0:21:15.37:475,15,0	1/1:27,1:28:38.13:672,38,0	1/1:29,0:28:63.09:617,63,0	0/0:24,0:24:72.25:0,72,1729	0/0:16,0:16:48.16:0,48,1176	0/0:17,0:17:51.15:0,51,1201	0/0:17,0:17:51.18:0,51,1256	0/1:24,0:24:21.80:625,0,22	1/1:22,0:22:51.11:612,51,0	1/1:9,0:9:15.02:142,15,0
chr10	92346165	.	TG	T	517.26	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.157;DP=686;FS=1.890;HRun=6;HaplotypeScore=72.8894;InbreedingCoeff=0.9529;MQ=76.93;MQ0=0;MQRankSum=-2.171;QD=24.63;ReadPosRankSum=-3.769;VQSLOD=1.8306;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1302	0/0:6,0:6:15.05:0,15,197	0/0:19,0:19:45.04:0,45,494	0/0:15,1:16:11.78:0,12,270	0/0:31,0:31:87.28:0,87,1139	0/0:19,0:19:48.16:0,48,630	0/0:27,0:27:69.21:0,69,891	1/1:2,19:21:57.14:612,57,0	0/0:28,0:28:81.25:0,81,1049	0/0:25,0:25:72.21:0,72,925	0/0:12,0:12:27.07:0,27,328	0/0:43,0:43:99:0,120,1521	0/0:22,0:22:63.20:0,63,827	0/0:30,0:30:81.23:0,81,1034	0/0:29,0:29:84.25:0,84,1074	0/0:22,0:22:66.21:0,66,868	0/0:37,0:37:99:0,105,1380	0/0:23,0:23:66.21:0,66,866	0/0:17,0:17:39.09:0,39,492	0/0:18,0:18:51.17:0,51,670	0/0:44,0:44:99:0,129,1611	0/0:23,0:23:66.21:0,66,862	0/0:21,0:21:54.15:0,54,678	0/0:33,0:33:87.21:0,87,1102	0/0:20,0:20:60.20:0,60,788	0/0:25,0:25:63.19:0,63,797	0/0:24,0:24:69.22:0,69,894	0/0:15,0:15:39.13:0,39,513
chr10	92347447	.	TAGC	T	9403.20	PASS	AB=0.908;AC=42;AF=0.750;AN=56;BaseQRankSum=8.884;DP=518;FS=3.419;HRun=0;HaplotypeScore=83.6730;InbreedingCoeff=0.6860;MQ=64.97;MQ0=0;MQRankSum=-3.012;QD=23.33;ReadPosRankSum=0.696;VQSLOD=4.7922;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,15:25:36.08:495,36,0	0/1:6,1:7:28.16:28,0,151	0/0:11,0:9:12.16:0,12,306	0/0:14,0:14:24.08:0,24,441	1/1:7,1:8:3.01:43,3,0	0/0:13,0:13:15.05:0,15,306	0/0:26,0:26:54.17:0,54,1053	1/1:9,8:17:24.06:303,24,0	1/1:9,13:22:57.15:785,57,0	1/1:5,2:7:6.02:86,6,0	1/1:2,1:3:2.88:15,3,0	1/1:15,23:38:87.18:1197,87,0	1/1:5,16:21:45.15:642,45,0	1/1:3,17:20:45.15:647,45,0	0/1:15,1:16:4.03:4,0,683	0/0:14,0:14:30.10:0,30,612	0/0:37,0:37:93.32:0,93,1896	1/1:7,18:25:57.19:816,57,0	1/1:8,3:11:12.03:144,12,0	1/1:1,1:2:3.01:43,3,0	1/1:38,22:60:78.56:1027,79,0	1/1:4,3:7:6.02:86,6,0	1/1:3,3:6:6.02:86,6,0	1/1:7,33:40:90.30:1283,90,0	1/1:4,4:8:9.03:129,9,0	1/1:12,8:20:20.44:245,20,0	1/1:5,14:19:42.14:604,42,0	1/1:3,18:21:48.16:691,48,0
chr10	92347528	.	TGG	T	8111.91	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=6.847;DP=499;FS=13.465;HRun=10;HaplotypeScore=78.1418;InbreedingCoeff=0.9449;MQ=74.81;MQ0=1;MQRankSum=-2.072;QD=25.83;ReadPosRankSum=6.265;VQSLOD=2.9842;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:69.16:0,69,1014	0/0:4,0:4:9.03:0,9,143	0/0:14,0:15:31.85:0,32,356	0/0:14,0:14:6.83:0,7,101	1/1:0,11:11:24.06:266,24,0	0/0:14,0:15:35.94:0,36,511	0/0:18,0:20:53.14:0,53,756	0/0:9,0:19:33.05:0,33,359	1/1:1,18:19:54.15:602,54,0	1/1:1,13:14:36.09:401,36,0	1/1:0,7:7:15:154,15,0	1/1:5,38:43:99:1271,114,0	1/1:1,6:7:18.04:201,18,0	1/1:4,9:12:27.06:301,27,0	0/0:17,0:17:39.12:0,39,598	0/0:12,0:12:33.11:0,33,521	0/0:41,0:41:99:0,105,1598	1/1:2,26:28:75.19:836,75,0	1/1:2,13:15:39.09:435,39,0	1/1:1,6:7:15.04:167,15,0	1/1:10,41:51:90.15:990,90,0	1/1:0,5:5:15.04:167,15,0	1/1:0,2:2:6.02:67,6,0	1/1:7,18:24:54.12:602,54,0	1/1:2,2:4:9.01:93,9,0	1/1:8,20:28:54.09:591,54,0	1/1:3,21:24:57.15:635,57,0	1/1:1,10:11:30.08:334,30,0
chr10	92362213	.	AC	A	19583.35	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=10.190;DP=637;FS=17.915;HRun=2;HaplotypeScore=106.6755;InbreedingCoeff=0.9780;MQ=82.40;MQ0=0;MQRankSum=-4.936;QD=36.07;ReadPosRankSum=3.731;VQSLOD=3.0888;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,163,2372	1/1:1,4:5:9.03:117,9,0	0/0:15,0:15:39.10:0,39,531	0/0:22,0:22:21.71:0,22,497	1/1:1,14:15:45.14:571,45,0	1/1:0,17:17:48.01:623,48,0	1/1:0,29:29:87.28:1129,87,0	1/1:3,25:28:75.20:919,75,0	1/1:0,15:15:45.15:584,45,0	1/1:0,13:13:39.13:506,39,0	1/1:0,11:11:33.11:428,33,0	1/1:2,40:42:99:1401,108,0	1/1:0,15:15:36.12:467,36,0	1/1:0,31:31:87.28:1129,87,0	1/1:0,16:16:45.15:584,45,0	1/1:0,17:17:42.14:545,42,0	1/1:1,36:37:99:1398,108,0	1/1:1,29:30:81.20:1016,81,0	1/1:0,23:23:69.17:863,69,0	1/1:0,13:13:39.13:506,39,0	1/1:0,54:54:99:2064,160,0	1/1:0,14:14:39.13:504,39,0	1/1:0,11:11:33.11:428,33,0	1/1:0,27:27:72.22:933,72,0	1/1:0,17:17:45.15:584,45,0	1/1:0,19:19:57.17:725,57,0	1/1:0,19:19:48.16:623,48,0	1/1:0,25:25:72.23:935,72,0
chr10	92363332	.	TG	T	28472.26	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.423;DP=926;FS=1.934;HRun=3;HaplotypeScore=96.1807;InbreedingCoeff=0.9667;MQ=84.54;MQ0=0;MQRankSum=-9.209;QD=34.06;ReadPosRankSum=3.876;VQSLOD=5.1439;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1469	1/1:0,18:18:54.17:667,54,0	0/0:28,0:28:75.11:0,75,982	0/0:27,0:27:8.73:0,9,733	1/1:1,23:24:57.17:706,57,0	1/1:0,22:22:60.19:744,60,0	1/1:1,35:36:93.29:1153,93,0	1/1:2,43:45:99:1555,129,0	1/1:3,31:34:90.28:1116,90,0	1/1:1,46:47:99:1695,138,0	1/1:1,19:20:54.17:669,54,0	1/1:1,46:47:99:1636,132,0	1/1:1,36:37:96.30:1190,96,0	1/1:1,44:45:99:1525,123,0	1/1:1,33:34:96.25:1172,96,0	1/1:0,34:34:96.30:1190,96,0	1/1:1,43:44:99:1562,126,0	1/1:1,32:33:93.29:1151,93,0	1/1:2,17:19:51.16:626,51,0	1/1:1,17:18:51.16:632,51,0	1/1:0,78:78:99:2640,214,0	1/1:0,38:38:99:1302,105,0	1/1:1,20:21:51.16:632,51,0	1/1:3,44:47:99:1599,129,0	1/1:1,28:29:81.25:1004,81,0	1/1:2,31:34:93.29:1153,93,0	1/1:0,28:28:81.25:1004,81,0	1/1:0,4:4:12.04:149,12,0
chr10	92363335	.	GT	G	8919.02	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=10.148;DP=929;FS=0.777;HRun=1;HaplotypeScore=164.3569;InbreedingCoeff=0.9724;MQ=83.40;MQ0=0;MQRankSum=-7.316;QD=10.62;ReadPosRankSum=8.118;VQSLOD=2.5175;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1637	1/1:18,0:18:50.11:251,50,0	0/0:25,0:25:75.13:0,75,1104	0/0:28,0:28:34.82:0,35,931	1/1:23,0:23:53.54:274,54,0	1/1:24,0:24:12.28:201,12,0	1/1:37,0:37:41.10:329,41,0	1/1:44,1:45:76.61:401,77,0	1/1:34,0:34:18.82:301,19,0	1/1:47,0:47:88.94:416,89,0	1/1:20,0:19:49.97:236,50,0	1/1:49,0:49:56.05:502,56,0	1/1:37,0:37:66.52:384,67,0	1/1:45,0:45:91.15:489,91,0	1/1:33,1:34:88.46:429,88,0	1/1:35,0:35:65.79:365,66,0	1/1:43,0:43:99:524,116,0	1/1:32,1:33:85.59:412,86,0	1/1:18,0:18:20.88:166,21,0	1/1:17,0:17:47.60:236,48,0	1/1:78,0:78:99:873,195,0	1/1:40,0:40:74.78:422,75,0	1/1:21,0:21:26.09:195,26,0	1/1:46,0:45:77.16:504,77,0	1/1:30,1:31:52.45:314,52,0	1/1:32,0:32:63.10:306,63,0	1/1:29,0:29:55.32:337,55,0	1/1:4,0:4:11.13:52,11,0
chr10	92366754	.	A	ATG	9568.20	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-14.513;DP=840;FS=1.746;HRun=0;HaplotypeScore=104.6981;InbreedingCoeff=0.9838;MQ=72.01;MQ0=8;MQRankSum=-1.367;QD=34.67;ReadPosRankSum=2.608;VQSLOD=6.9251;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.23:0,72,901	0/0:7,0:7:21.07:0,21,262	0/0:40,0:34:36.75:0,37,688	0/0:45,0:36:21.82:0,22,608	0/0:35,0:35:96.31:0,96,1201	0/0:27,0:26:57.11:0,57,693	0/0:25,0:25:69.19:0,69,833	0/0:52,0:52:99:0,111,1374	0/0:32,0:32:87.16:0,87,1039	1/1:7,22:30:66.23:1074,66,0	1/1:5,15:19:10.63:704,11,0	1/1:5,35:39:96.33:1584,96,0	1/1:0,19:19:45.15:743,45,0	1/1:4,20:24:51.17:842,51,0	0/0:40,0:40:99:0,111,1376	0/0:40,0:40:99:0,105,1288	0/0:18,0:18:45.14:0,45,563	1/1:6,21:28:63.18:1008,63,0	0/0:17,0:17:39.12:0,39,487	0/0:33,0:33:84.24:0,84,1025	0/0:52,0:52:99:0,135,1675	1/1:9,35:43:12.68:1216,13,0	1/1:4,20:24:57.19:939,57,0	1/1:5,21:26:51.17:833,51,0	1/1:4,16:20:39.13:624,39,0	0/0:33,2:35:11.83:0,12,893	0/0:24,0:23:54.17:0,54,675	0/0:14,0:14:36.12:0,36,450
chr10	92367048	.	GGTGT	G	2125.04	PASS	AB=0.845;AC=14;AF=0.259;AN=54;BaseQRankSum=5.004;DP=732;FS=17.101;HRun=0;HaplotypeScore=133.2405;InbreedingCoeff=0.5687;MQ=63.52;MQ0=6;MQRankSum=0.062;QD=8.78;ReadPosRankSum=2.207;VQSLOD=1.9808;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:45:56.85:0,57,1038	1/1:0,4:4:12.04:188,12,0	0/0:32,0:22:3.01:0,3,44	./.	0/1:27,1:28:26.08:26,0,644	1/1:14,9:24:17.72:263,18,0	0/1:20,21:43:27.57:506,0,28	0/1:34,2:35:35.43:35,0,67	0/0:27,1:31:26.56:0,27,507	0/0:16,0:16:15.04:0,15,304	0/0:16,0:17:23.82:0,24,468	0/0:28,0:29:38.20:0,38,690	0/1:17,0:22:4.19:4,0,279	0/0:22,0:27:41.57:0,42,730	1/1:19,18:38:39.43:585,39,0	1/1:8,11:20:26.63:423,27,0	1/1:14,11:26:8.45:270,8,0	0/0:15,0:17:17.76:0,18,292	0/0:24,0:24:22.31:0,22,419	0/0:22,0:22:24.05:0,24,446	0/0:63,0:63:72.22:0,72,1575	0/0:17,0:17:24.08:0,24,556	0/0:14,0:20:26.81:0,27,484	0/0:28,0:30:8.70:0,9,652	0/0:17,0:21:30.03:0,30,537	0/0:26,0:26:39.25:0,39,701	0/0:17,0:17:17.80:0,18,349	0/0:8,0:7:15:0,15,303
chr10	92368092	.	CA	C	11409.97	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=13.241;DP=730;FS=2.760;HRun=5;HaplotypeScore=74.0932;InbreedingCoeff=0.9967;MQ=82.25;MQ0=0;MQRankSum=-4.016;QD=29.95;ReadPosRankSum=3.581;VQSLOD=5.5967;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,141,1895	1/1:0,9:9:27.08:306,27,0	0/0:17,0:17:33.03:0,33,497	0/0:29,0:29:81.27:0,81,1089	1/1:2,18:20:51.14:578,51,0	1/1:1,19:20:54.15:612,54,0	1/1:1,46:47:99:1430,126,0	0/0:32,0:31:90.28:0,90,1192	1/1:2,26:28:63.18:715,63,0	0/0:19,0:19:54.17:0,54,725	0/0:5,0:5:15.04:0,15,190	0/0:46,0:46:99:0,126,1704	0/0:24,0:24:63.21:0,63,862	0/0:21,0:21:57.19:0,57,776	1/1:1,30:31:75.21:851,75,0	1/1:2,23:25:63.18:715,63,0	1/1:1,36:37:99:1123,99,0	0/0:29,0:29:84.27:0,84,1132	1/1:1,18:19:57.11:632,57,0	1/1:1,24:25:69.20:783,69,0	1/1:0,54:54:99:1769,156,0	0/0:17,0:17:48.16:0,48,654	0/0:21,0:21:57.19:0,57,777	0/0:17,0:17:42.14:0,42,574	0/0:20,0:20:57.16:0,57,746	1/1:3,19:22:19.12:605,19,0	1/1:2,29:31:81.23:918,81,0	1/1:0,13:13:33.09:374,33,0
chr10	92368662	.	GGCATGCTGGGGGTAGGT	G	448.38	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.002;DP=613;FS=3.061;HRun=0;HaplotypeScore=267.6958;InbreedingCoeff=0.9277;MQ=78.23;MQ0=0;MQRankSum=-2.722;QD=26.38;ReadPosRankSum=-2.415;VQSLOD=1.6621;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:84.29:0,84,5826	0/0:15,0:15:39.12:0,39,2573	0/0:11,0:11:24.07:0,24,747	0/0:18,0:18:38.92:0,39,1997	0/0:11,0:11:24.08:0,24,1955	0/0:19,0:19:54.19:0,54,4002	0/0:23,0:23:60.21:0,60,4295	1/1:7,10:17:27.06:542,27,0	0/0:14,0:14:36.11:0,36,2619	0/0:16,0:15:42.14:0,42,3044	0/0:13,0:13:36.12:0,36,2470	0/0:41,0:41:99:0,108,8250	0/0:25,0:25:75.24:0,75,5534	0/0:25,0:25:66.23:0,66,4890	0/0:24,0:24:69.24:0,69,5200	0/0:16,0:16:45.15:0,45,3239	0/0:48,0:48:99:0,135,9503	0/0:24,0:24:66.17:0,66,4313	0/0:21,0:21:51.16:0,51,3204	0/0:13,0:13:33.03:0,33,2284	0/0:85,0:85:99:0,229,16789	0/0:13,0:13:30.10:0,30,2380	0/0:10,0:10:27.09:0,27,1882	0/0:34,0:34:90.31:0,90,6728	0/0:7,0:7:18.06:0,18,1267	0/0:21,0:21:48.16:0,48,3712	0/0:9,0:9:21.07:0,21,1604	0/0:7,0:7:9:0,9,512
chr10	92368894	.	CGTGT	C	2761.10	PASS	AB=0.733;AC=26;AF=0.500;AN=52;BaseQRankSum=1.488;DP=581;FS=16.903;HRun=0;HaplotypeScore=144.6771;InbreedingCoeff=0.6620;MQ=54.06;MQ0=15;MQRankSum=-1.353;QD=9.55;ReadPosRankSum=3.004;VQSLOD=2.2114;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:39:33.07:0,33,517	1/1:5,4:10:9.02:124,9,0	./.	0/0:26,0:13:3:0,3,25	1/1:4,0:14:5.21:35,5,0	1/1:9,14:24:13.27:195,13,0	0/1:13,12:26:1.32:225,0,1	0/1:24,0:31:14.10:14,0,14	1/1:11,0:16:4.49:55,4,0	0/0:17,0:24:29.96:0,30,371	0/0:13,0:13:6.02:0,6,96	0/0:36,0:41:33.06:0,33,441	0/0:10,0:13:3.01:0,3,36	0/0:13,0:13:5.93:0,6,123	1/1:7,15:23:27.08:411,27,0	1/1:7,8:16:21.06:296,21,0	1/1:11,16:28:27.47:544,27,0	0/0:20,0:19:24.08:0,24,418	1/1:13,0:23:9.34:214,9,0	1/1:8,0:16:8.93:75,9,0	./.	0/0:6,0:12:3:0,3,28	0/0:19,0:22:3.01:0,3,63	0/0:11,0:19:9.02:0,9,136	0/0:6,0:6:9:0,9,99	1/1:11,0:22:32.92:283,33,0	1/1:8,0:15:15.02:140,15,0	1/1:11,0:22:36.04:335,36,0
chr10	92369095	.	TACACAC	T	6008.76	PASS	AB=0.544;AC=17;AF=0.304;AN=56;BaseQRankSum=13.251;DP=543;FS=3.866;HRun=0;HaplotypeScore=121.4319;InbreedingCoeff=0.8813;MQ=56.31;MQ0=3;MQRankSum=-11.803;QD=33.38;ReadPosRankSum=1.871;VQSLOD=4.7840;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:81.28:0,81,2660	0/0:10,0:10:24.08:0,24,794	0/0:17,0:9:24.08:0,24,708	0/0:16,0:11:29.93:0,30,723	1/1:1,14:15:21.07:454,21,0	0/0:19,0:19:39.13:0,39,1312	0/0:18,0:18:24.08:0,24,806	1/1:13,0:36:21.72:211,22,0	1/1:0,23:23:57.20:1232,57,0	0/0:19,0:19:48.16:0,48,1575	0/0:15,0:15:39.13:0,39,1288	0/0:22,0:22:45.15:0,45,1507	0/0:19,0:19:51.18:0,51,1671	0/0:24,0:25:60.21:0,60,1956	0/0:19,0:19:42.14:0,42,1413	0/0:22,0:23:54.16:0,54,1676	0/0:22,0:22:51.16:0,51,1704	0/0:22,0:22:51.18:0,51,1699	1/1:9,9:17:27.07:542,27,0	1/1:0,14:14:33.08:670,33,0	1/1:8,5:13:3.01:65,3,0	0/0:10,0:10:21.07:0,21,706	0/0:13,0:13:24.08:0,24,737	0/0:22,0:22:63.22:0,63,2056	0/0:18,0:18:45.14:0,45,1437	0/1:5,26:31:28.76:1287,0,29	1/1:3,20:23:54.19:1159,54,0	1/1:1,6:7:18.06:389,18,0
chr10	92371611	.	C	CT	2580.93	PASS	AB=0.729;AC=29;AF=0.518;AN=56;BaseQRankSum=3.683;DP=551;FS=5.946;HRun=14;HaplotypeScore=81.3020;InbreedingCoeff=0.1062;MQ=74.34;MQ0=1;MQRankSum=-0.032;QD=6.79;ReadPosRankSum=0.012;VQSLOD=2.6795;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:38:48.85:0,49,313	0/1:10,0:10:1.33:1,0,109	0/1:26,0:21:18.21:24,0,18	0/0:14,0:13:5.38:0,5,27	0/1:11,8:19:54.93:160,0,55	0/1:20,2:23:19.23:19,0,129	0/0:16,0:16:20.45:0,20,133	0/0:37,0:38:60.63:0,61,359	1/1:7,11:18:7.74:185,8,0	0/1:17,4:21:38.07:185,0,38	1/1:7,11:18:31.15:252,31,0	1/1:4,10:14:12.88:107,13,0	0/1:4,10:14:3.79:91,0,4	0/1:7,16:24:14.33:152,0,14	0/0:19,0:19:26.46:0,26,173	0/0:27,0:27:44.02:0,44,285	0/0:19,0:19:47.15:0,47,303	1/1:5,17:22:16.73:271,17,0	0/1:12,9:21:31.66:159,0,32	0/1:8,14:22:2.81:179,0,3	0/1:9,9:18:17.56:107,0,18	1/1:3,10:13:4.73:166,5,0	1/1:3,7:10:6.94:55,7,0	0/1:4,17:21:8.50:181,0,8	0/1:6,7:13:22.26:66,0,22	0/1:14,17:31:4.93:205,0,5	1/1:4,11:15:14.90:117,15,0	1/1:3,4:7:9:79,9,0
chr10	92372569	.	A	AC	1975.62	PASS	AB=0.757;AC=39;AF=0.696;AN=56;BaseQRankSum=-0.128;DP=427;FS=0.629;HRun=10;HaplotypeScore=66.0454;InbreedingCoeff=0.0214;MQ=67.55;MQ0=1;MQRankSum=-1.620;QD=5.44;ReadPosRankSum=0.426;VQSLOD=1.0202;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:32:69:0,69,531	1/1:2,0:4:11.68:83,12,0	0/1:17,2:16:28.04:110,0,28	0/0:23,0:20:25.79:0,26,217	0/1:12,9:21:55.14:55,0,56	1/1:1,0:10:11.69:77,12,0	0/1:11,4:21:12.42:50,0,12	0/1:11,10:21:6.60:140,0,7	1/1:3,7:10:9.01:96,9,0	0/1:7,1:9:0:0,0,0	0/1:7,2:8:15.42:47,0,15	1/1:24,0:24:37.89:244,38,0	1/1:7,8:15:2.81:32,3,0	1/1:10,0:10:11.81:82,12,0	1/1:3,3:13:14.57:107,15,0	1/1:5,2:22:15.73:96,16,0	1/1:5,1:19:19.63:144,20,0	1/1:12,2:14:26.24:179,26,0	0/1:9,2:10:9.18:101,0,9	0/1:14,3:17:45.17:75,0,45	0/1:13,8:21:20.79:21,0,61	1/1:13,0:13:1.25:3,1,0	1/1:5,1:11:8.07:51,8,0	1/1:3,0:12:5.68:28,6,0	0/0:7,1:8:0.47:0,0,1	1/1:9,1:9:5.55:46,6,0	0/1:6,13:18:22.16:197,0,22	0/1:4,2:6:12.67:70,0,13
chr10	92373060	.	T	TA	2416.13	PASS	AB=0.782;AC=34;AF=0.607;AN=56;BaseQRankSum=-1.222;DP=546;FS=13.294;HRun=14;HaplotypeScore=82.7054;InbreedingCoeff=0.4720;MQ=59.24;MQ0=9;MQRankSum=0.315;QD=6.12;ReadPosRankSum=-3.660;VQSLOD=0.2449;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:40,1:43:3.27:3,0,329	0/0:5,0:5:2.83:0,3,19	0/0:24,0:8:3.11:0,3,31	0/0:11,0:7:5.52:0,6,36	0/1:13,4:18:2.46:96,0,2	0/0:15,0:16:24.85:0,25,154	0/0:27,0:27:20.37:0,20,244	0/0:10,0:21:21.87:0,22,89	0/1:11,12:24:3.18:80,0,3	1/1:9,14:22:26.94:225,27,0	1/1:7,11:18:17.66:138,18,0	1/1:12,4:17:27.23:209,27,0	1/1:7,5:12:22.96:173,23,0	1/1:3,11:14:6:52,6,0	0/0:17,0:20:21.79:0,22,126	0/0:23,0:23:7.03:0,7,141	0/1:29,0:29:0.13:0,0,125	1/1:4,9:13:9:79,9,0	1/1:13,0:15:13.14:103,13,0	1/1:17,7:25:7.41:264,7,0	0/1:5,8:13:10.27:44,0,10	1/1:5,9:14:1.64:127,2,0	1/1:11,12:23:1.64:131,2,0	1/1:8,11:20:9.05:179,9,0	0/1:5,7:12:12.31:21,0,12	1/1:6,14:20:35.80:277,36,0	1/1:19,6:25:6.22:264,6,0	1/1:6,11:14:15:132,15,0
chr10	92373159	.	AACAC	A	609.95	PASS	AB=0.934;AC=16;AF=0.333;AN=48;BaseQRankSum=4.430;DP=522;FS=17.525;HRun=0;HaplotypeScore=95.1339;InbreedingCoeff=0.4514;MQ=64.00;MQ0=11;MQRankSum=-2.644;QD=2.95;ReadPosRankSum=-1.956;VQSLOD=0.3793;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:24.06:0,24,474	1/1:5,4:9:6.91:94,7,0	./.	./.	0/1:14,1:16:16.94:40,0,17	1/1:9,0:11:9.38:72,9,0	1/1:19,0:24:9.01:84,9,0	0/0:21,0:19:3.48:0,3,55	0/0:15,0:18:14.08:0,14,70	0/0:15,0:16:21.06:0,21,332	./.	0/0:18,0:18:14.77:0,15,233	0/0:12,0:11:11.97:0,12,220	0/0:11,0:11:6:0,6,86	1/1:17,5:22:6.01:74,6,0	1/1:12,0:18:12.01:112,12,0	1/1:23,8:31:0.78:248,1,0	0/0:5,0:5:6.02:0,6,122	0/1:18,0:18:27.18:27,0,92	0/0:7,0:9:7.31:0,7,28	0/0:38,0:41:25.22:0,25,174	0/0:13,0:13:17.66:0,18,338	0/0:9,0:9:12.02:0,12,219	0/1:27,1:31:1.99:2,0,639	0/0:18,0:18:18.05:0,18,366	0/1:23,0:24:13.01:13,0,124	0/0:10,0:13:14.21:0,14,81	./.
chr10	92373519	.	GA	G	4190.01	PASS	AB=0.923;AC=19;AF=0.339;AN=56;BaseQRankSum=11.798;DP=637;FS=3.405;HRun=10;HaplotypeScore=70.9367;InbreedingCoeff=0.9302;MQ=75.50;MQ0=2;MQRankSum=1.309;QD=17.83;ReadPosRankSum=-0.530;VQSLOD=4.1366;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.10:0,66,698	0/0:15,0:15:39.11:0,39,431	0/0:31,1:26:13.14:0,13,168	0/0:15,0:12:13.91:0,14,136	1/1:6,18:24:50.96:441,51,0	0/0:21,0:21:59.37:0,59,631	0/0:20,1:21:27.31:0,27,512	1/1:5,26:31:77.65:638,78,0	1/1:3,16:19:29.93:260,30,0	0/0:24,0:24:60.16:0,60,658	0/0:14,1:15:15.99:0,16,382	0/0:27,0:27:72.13:0,72,756	0/0:24,0:24:60.15:0,60,649	0/0:20,0:22:59.83:0,60,623	0/0:30,0:30:84.22:0,84,921	0/0:23,2:25:11.07:0,11,578	0/0:25,0:25:66.16:0,66,721	0/1:11,1:12:2.03:2,0,195	1/1:6,21:27:59.91:509,60,0	1/1:7,18:25:50.98:442,51,0	1/1:3,24:27:62.98:547,63,0	0/0:19,0:19:48.13:0,48,530	0/0:20,0:20:51.12:0,51,555	0/0:20,0:22:62.84:0,63,658	0/0:22,0:22:60.16:0,60,664	1/1:6,26:33:19.66:616,20,0	1/1:2,27:30:74.02:631,74,0	1/1:0,7:7:12:104,12,0
chr10	92374013	.	T	TTTTC	1736.36	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=2.645;DP=545;FS=16.058;HRun=0;HaplotypeScore=120.2292;InbreedingCoeff=0.1456;MQ=55.69;MQ0=10;MQRankSum=-3.052;QD=8.43;ReadPosRankSum=-2.594;VQSLOD=0.6755;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,115,1708	0/0:9,0:9:14.91:0,15,109	0/0:15,0:10:14.28:0,14,139	0/1:12,0:6:2.42:2,0,56	0/0:24,0:24:50.64:0,51,374	0/0:15,0:15:28.18:0,28,199	0/0:18,0:17:25.49:0,25,218	1/1:10,22:32:78.05:1332,78,0	0/0:18,0:18:35.58:0,36,258	0/1:17,0:17:46.69:54,0,47	0/1:32,0:32:92.49:92,0,135	0/1:15,0:14:9.09:113,0,9	1/1:10,0:10:0.37:11,0,0	0/1:15,0:15:10.51:11,0,59	0/0:15,0:15:38.89:0,39,341	0/0:17,0:17:38.73:0,39,281	0/0:40,0:39:88.36:0,88,625	0/1:19,0:17:56.49:84,0,56	0/0:26,0:26:42.33:0,42,436	0/0:18,0:18:32.95:0,33,229	0/0:17,0:17:28.15:0,28,239	1/1:11,0:11:6.65:47,7,0	0/1:14,0:13:33.31:33,0,84	0/1:17,0:17:9.59:53,0,10	0/1:11,0:11:14.98:63,0,15	0/0:26,0:25:46.13:0,46,431	0/0:27,0:26:56.95:0,57,471	0/0:10,0:10:17.90:0,18,130
chr10	92374021	.	C	CTTT	4152.16	PASS	AB=0.768;AC=46;AF=0.821;AN=56;BaseQRankSum=4.698;DP=583;FS=1.302;HRun=12;HaplotypeScore=96.2609;InbreedingCoeff=0.0824;MQ=50.96;MQ0=23;MQRankSum=0.443;QD=7.75;ReadPosRankSum=1.200;VQSLOD=0.1194;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:89.58:0,90,1112	1/1:0,0:8:6.23:14,6,0	0/1:12,0:8:20.80:21,0,31	0/1:10,0:4:1.83:2,0,6	1/1:11,0:29:19.70:59,20,0	1/1:4,0:14:15.45:50,15,0	0/1:6,0:18:13.48:48,0,13	0/1:32,0:32:50.58:425,0,51	1/1:5,0:18:29.81:132,30,0	1/1:6,13:20:35.12:370,35,0	1/1:13,21:36:55.80:688,56,0	1/1:10,6:15:35.78:480,36,0	1/1:0,7:8:5.87:78,6,0	1/1:7,3:16:8.28:134,8,0	0/1:7,0:18:7.58:8,0,46	1/1:1,0:16:16.38:42,16,0	1/1:20,0:40:37.01:122,37,0	1/1:13,9:18:17.76:230,18,0	0/1:14,1:29:30.65:116,0,31	1/1:8,0:17:15.94:68,16,0	0/1:7,0:18:16.49:37,0,16	1/1:2,8:10:18.04:275,18,0	1/1:7,8:14:8.99:130,9,0	1/1:7,15:18:15.05:275,15,0	1/1:3,9:12:9.03:153,9,0	1/1:7,1:26:13.05:129,13,0	0/1:17,0:25:18.03:51,0,18	1/1:2,0:9:7.48:17,7,0
chr10	92375049	.	T	TCAACAACAA	17015.52	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=9.624;DP=785;FS=0.000;HRun=0;HaplotypeScore=212.5942;InbreedingCoeff=0.9688;MQ=54.42;MQ0=1;MQRankSum=-11.132;QD=33.56;ReadPosRankSum=-3.611;VQSLOD=3.8380;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,123,2966	0/0:17,0:17:42.12:0,42,1045	0/0:38,0:35:63.72:0,64,1017	0/0:25,0:24:31.98:0,32,644	1/1:10,14:31:50.97:1445,51,0	0/0:18,0:18:48.10:0,48,1089	0/0:26,0:26:57.14:0,57,1335	1/1:28,0:27:35.35:307,35,0	1/1:8,20:34:33.11:1367,33,0	1/1:9,0:32:66.13:1192,66,0	1/1:3,0:13:11.97:211,12,0	1/1:9,0:30:54.05:1118,54,0	1/1:9,0:26:34:673,34,0	1/1:3,0:28:39.12:806,39,0	0/0:34,0:34:87.24:0,87,2208	0/0:33,0:33:87.22:0,87,2038	0/0:35,0:35:87.24:0,87,2270	1/1:4,0:19:21.07:450,21,0	1/1:6,8:24:54.86:1107,55,0	1/1:7,13:26:50.80:1167,51,0	1/1:21,0:21:4.08:310,4,0	1/1:9,0:30:41.69:864,42,0	1/1:7,0:21:35.78:712,36,0	1/1:16,0:38:48.31:894,48,0	1/1:4,0:20:24.08:519,24,0	1/1:6,11:32:69.31:1798,69,0	1/1:3,21:32:33.01:1502,33,0	1/1:3,9:19:15.03:571,15,0
chr10	92375189	.	T	TGG	387.81	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.874;DP=600;FS=1.163;HRun=7;HaplotypeScore=74.7335;InbreedingCoeff=0.9983;MQ=79.89;MQ0=0;MQRankSum=-1.189;QD=17.63;ReadPosRankSum=-2.229;VQSLOD=0.9029;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,102,1164	0/0:12,0:12:33.08:0,33,373	0/0:18,0:18:33.01:0,33,346	0/0:15,0:15:35.99:0,36,391	0/0:19,0:19:48.14:0,48,559	0/0:20,0:20:54.16:0,54,629	0/0:30,0:30:84.24:0,84,977	1/1:9,12:22:33.06:482,33,0	0/0:24,0:24:60.17:0,60,699	0/0:18,0:18:51.14:0,51,586	0/0:17,0:17:45.09:0,45,508	0/0:22,0:22:60.18:0,60,699	0/0:25,0:25:63.10:0,63,689	0/0:17,0:17:45.12:0,45,524	0/0:21,0:21:57.16:0,57,664	0/0:17,0:17:51.15:0,51,594	0/0:27,0:27:75.21:0,75,864	0/0:22,0:22:60.12:0,60,684	0/0:26,0:26:60.15:0,60,697	0/0:22,0:22:54.14:0,54,621	0/0:27,0:27:60.16:0,60,699	0/0:18,0:18:45.11:0,45,513	0/0:24,0:24:66.19:0,66,769	0/0:28,0:28:66.10:0,66,739	0/0:16,0:15:36.09:0,36,419	0/0:23,0:23:57.16:0,57,664	0/0:18,0:18:39.09:0,39,454	0/0:11,0:11:30.09:0,30,350
chr10	92377368	.	CCA	C	1834.06	PASS	AB=0.993;AC=27;AF=0.482;AN=56;BaseQRankSum=10.071;DP=515;FS=14.117;HRun=0;HaplotypeScore=87.7894;InbreedingCoeff=0.3068;MQ=78.76;MQ0=0;MQRankSum=-1.747;QD=6.09;ReadPosRankSum=-5.343;VQSLOD=-0.0563;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1742	0/0:11,0:11:33.08:0,33,550	0/0:16,0:16:27.04:0,27,474	0/0:9,0:9:23.06:0,23,301	1/1:14,1:15:25.14:166,25,0	0/0:16,0:16:48.13:0,48,767	0/0:36,0:36:99:0,105,1698	1/1:15,0:15:0.51:137,1,0	1/1:22,1:23:27.94:131,28,0	0/1:12,0:12:17.39:89,0,17	0/1:11,0:11:22.29:22,0,57	0/1:14,1:15:22.26:110,0,22	0/1:16,0:16:50.34:99,0,50	0/0:11,0:11:1.58:0,2,47	0/0:26,0:26:78.22:0,78,1279	0/0:22,0:22:66.23:0,66,1152	0/0:32,0:32:96.28:0,96,1598	0/1:34,0:34:35.16:35,0,255	1/1:10,1:11:23.31:187,23,0	1/1:7,0:7:9.61:61,10,0	1/1:28,1:29:36.22:176,36,0	0/1:7,0:7:27.49:31,0,27	0/1:6,0:6:4.98:5,0,10	0/1:26,0:26:99:102,0,128	0/1:16,0:16:43.44:43,0,62	1/1:24,2:26:59.50:446,60,0	1/1:21,0:20:31.81:110,32,0	1/1:11,0:11:18.48:77,18,0
chr10	92377369	.	CA	C	5175.99	PASS	AB=0.990;AC=35;AF=0.625;AN=56;BaseQRankSum=5.738;DP=521;FS=26.245;HRun=1;HaplotypeScore=69.1469;InbreedingCoeff=0.7450;MQ=80.81;MQ0=0;MQRankSum=-1.110;QD=16.70;ReadPosRankSum=-6.561;VQSLOD=2.1011;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1391	0/0:11,0:11:33.08:0,33,439	0/0:17,0:17:31.42:0,31,437	0/0:11,0:11:19.35:0,19,236	1/1:1,14:15:26.66:238,27,0	0/0:16,0:16:48.11:0,48,607	0/0:37,0:37:99:0,108,1366	1/1:13,0:13:22.54:220,23,0	1/1:1,21:22:35.81:462,36,0	1/1:12,1:13:24.27:206,24,0	0/1:10,0:10:15.15:50,0,15	1/1:13,2:15:21.67:282,22,0	1/1:14,2:16:8.22:171,8,0	1/1:11,0:11:5.83:100,6,0	0/0:26,0:26:78.21:0,78,1019	0/0:24,0:24:46.06:0,46,905	0/0:33,0:33:96.26:0,96,1273	0/1:33,1:34:23.88:208,0,24	1/1:1,10:11:29.94:308,30,0	1/1:0,7:7:17.78:158,18,0	1/1:2,27:29:45:547,45,0	1/1:7,0:7:4.91:60,5,0	0/1:6,0:6:4.29:11,0,4	1/1:21,6:27:12.17:437,12,0	1/1:14,2:16:16.02:225,16,0	1/1:2,24:26:71.31:618,71,0	1/1:0,21:21:42.14:575,42,0	1/1:0,11:11:24.06:298,24,0
chr10	92381522	.	G	GT	3739.90	PASS	AB=0.731;AC=21;AF=0.375;AN=56;BaseQRankSum=-10.135;DP=625;FS=7.111;HRun=12;HaplotypeScore=72.3588;InbreedingCoeff=0.6974;MQ=73.49;MQ0=0;MQRankSum=-1.061;QD=13.60;ReadPosRankSum=-2.589;VQSLOD=2.9590;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:45,1:47:3.36:0,3,573	0/0:10,0:10:14.86:0,15,109	0/0:21,0:19:13.06:0,13,101	0/0:20,0:19:18.15:0,18,158	0/1:25,2:27:4.71:5,0,296	0/0:19,0:21:54.67:0,55,376	0/0:17,0:19:42.58:0,43,284	1/1:16,24:40:15.29:620,15,0	0/0:18,0:18:41.66:0,42,300	1/1:5,31:37:81.02:795,81,0	1/1:6,16:22:35.80:316,36,0	0/1:8,10:19:19.86:137,0,20	1/1:4,17:21:8.14:241,8,0	1/1:4,20:24:36.06:351,36,0	0/0:14,1:15:9.61:0,10,233	0/0:16,0:18:37.81:0,38,267	0/0:25,1:29:42.26:0,42,430	1/1:2,17:19:20.16:358,20,0	0/0:22,1:24:11.54:0,12,234	0/0:21,0:21:47.67:0,48,346	0/0:9,0:10:25.89:0,26,181	1/1:4,15:20:5.08:310,5,0	1/1:3,10:14:21.03:204,21,0	1/1:2,8:10:5.13:212,5,0	0/1:9,13:22:16.55:192,0,17	0/0:22,0:26:22.35:0,22,262	0/0:21,0:24:61.45:0,61,432	0/0:24,0:27:69.69:0,70,493
chr10	92383101	.	G	GTC	13280.35	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-17.423;DP=707;FS=0.602;HRun=0;HaplotypeScore=88.7647;InbreedingCoeff=0.9991;MQ=95.32;MQ0=2;MQRankSum=-3.609;QD=46.27;ReadPosRankSum=3.049;VQSLOD=6.1700;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,1871	0/0:9,0:9:21.07:0,21,301	0/0:33,0:33:77.36:0,77,1050	0/0:38,0:38:94.53:0,95,1201	0/0:19,0:19:51.17:0,51,730	0/0:16,0:16:45.13:0,45,625	0/0:20,0:20:45.15:0,45,645	1/1:3,30:33:87.28:1565,87,0	0/0:24,0:24:69.23:0,69,985	1/1:4,31:35:90.30:1616,90,0	1/1:0,16:16:42.14:770,42,0	1/1:0,33:35:99:1808,99,0	1/1:1,29:31:78.27:1429,78,0	1/1:1,21:23:57.19:1042,57,0	0/0:25,0:25:72.24:0,72,1032	0/0:31,0:31:90.28:0,90,1255	0/0:27,0:27:81.25:0,81,1139	1/1:2,28:30:69.24:1264,69,0	0/0:17,0:17:45.15:0,45,645	0/0:13,0:13:36.12:0,36,507	0/0:36,0:36:99:0,99,1400	1/1:1,22:23:60.21:1099,60,0	1/1:0,14:16:36.12:653,36,0	1/1:1,30:30:84.29:1540,84,0	1/1:0,14:13:27.09:495,27,0	0/0:34,0:34:99:0,102,1462	0/0:23,0:23:66.22:0,66,946	0/0:9,0:9:27.09:0,27,384
chr10	92383346	.	CT	C	5326.78	PASS	AB=0.900;AC=23;AF=0.411;AN=56;BaseQRankSum=12.906;DP=707;FS=7.853;HRun=10;HaplotypeScore=74.5996;InbreedingCoeff=0.9426;MQ=63.71;MQ0=4;MQRankSum=-2.056;QD=18.50;ReadPosRankSum=2.030;VQSLOD=5.6353;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:48:99:0,120,1285	0/1:8,1:9:4.86:5,0,178	0/0:23,0:18:41.64:0,42,401	0/0:17,0:14:21.12:0,21,253	0/0:24,0:24:66.16:0,66,711	0/0:19,0:19:40.38:0,40,460	0/0:36,0:36:96.26:0,96,1060	1/1:4,22:25:59.01:500,59,0	0/0:19,1:20:19.07:0,19,438	1/1:10,30:39:86.89:740,87,0	1/1:4,13:17:38.99:338,39,0	1/1:6,23:28:40.05:519,40,0	1/1:6,19:23:33.30:447,33,0	1/1:4,17:20:50.98:443,51,0	0/0:30,0:30:80.14:0,80,860	0/0:29,0:29:69.17:0,69,754	0/0:40,0:41:99:0,113,1189	1/1:3,26:29:74.94:651,75,0	0/0:17,0:17:39.08:0,39,412	0/0:21,0:22:50.97:0,51,545	0/0:26,0:26:69.16:0,69,738	1/1:4,15:18:44.98:391,45,0	1/1:1,18:19:44.99:389,45,0	1/1:2,27:29:35.81:540,36,0	1/1:6,18:24:41.97:365,42,0	0/0:23,0:23:54.14:0,54,589	0/0:27,0:27:72.17:0,72,779	0/0:17,0:17:51.14:0,51,563
chr10	92383916	.	GAC	G	121.96	PASS	AB=0.921;AC=8;AF=0.143;AN=56;BaseQRankSum=-1.061;DP=408;FS=2.655;HRun=0;HaplotypeScore=96.6093;InbreedingCoeff=-0.0486;MQ=78.71;MQ0=1;MQRankSum=-0.783;QD=1.26;ReadPosRankSum=2.992;VQSLOD=1.7802;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:22,1:23:58.69:59,0,128	0/0:1,0:1:3:0,3,25	0/0:29,0:21:58.48:0,58,612	0/0:22,0:16:18.77:0,19,273	0/0:2,0:2:3:0,3,25	0/1:10,1:11:32.67:33,0,63	0/1:27,1:28:74.44:74,0,123	0/0:11,0:11:33.05:0,33,386	0/0:8,0:8:12.08:0,12,57	0/0:13,0:13:35.95:0,36,429	0/0:3,0:3:6.01:0,6,63	0/0:15,0:15:36.09:0,36,490	0/0:10,0:10:29.89:0,30,375	0/0:21,0:21:47.32:0,47,593	0/1:16,0:16:18.85:19,0,35	0/1:14,1:15:23.98:51,0,24	0/0:30,0:31:13.71:0,14,141	0/0:29,0:29:69.42:0,69,918	0/0:13,0:13:32.11:0,32,165	1/1:1,0:1:0.47:1,0,0	0/0:24,0:24:53.70:0,54,298	0/0:3,0:3:9.03:0,9,134	0/0:7,0:7:20.95:0,21,223	0/0:24,0:24:60.13:0,60,825	0/0:6,0:6:18.01:0,18,210	0/0:22,0:22:48.87:0,49,316	0/0:16,0:15:32.05:0,32,189	0/1:2,0:3:3.19:3,0,18
chr10	92383917	.	ACCC	A	2338.32	PASS	AB=0.649;AC=22;AF=0.407;AN=54;BaseQRankSum=-7.975;DP=414;FS=7.530;HRun=13;HaplotypeScore=97.3887;InbreedingCoeff=0.7172;MQ=79.07;MQ0=1;MQRankSum=-1.068;QD=12.78;ReadPosRankSum=1.289;VQSLOD=1.7385;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:23:11.21:0,11,26	0/0:2,0:2:3:0,3,26	0/0:34,0:22:36.11:0,36,503	0/0:22,0:16:14.96:0,15,211	./.	1/1:5,0:11:14.38:83,14,0	1/1:8,2:27:50.29:398,50,0	0/0:13,0:13:18.06:0,18,242	1/1:1,6:7:12.02:146,12,0	0/0:13,0:13:18.01:0,18,241	0/0:3,0:3:3.01:0,3,40	0/0:17,0:17:39.12:0,39,493	0/0:10,0:10:24.08:0,24,322	0/0:21,0:21:36.05:0,36,455	0/1:11,0:16:35.54:47,0,36	1/1:3,1:15:35.41:257,35,0	0/1:4,0:30:18.45:18,0,49	0/0:27,0:29:58.74:0,59,741	1/1:3,7:13:29.91:299,30,0	1/1:0,1:1:3:25,3,0	1/1:9,15:24:39.90:453,40,0	0/0:3,0:3:9.03:0,9,117	0/0:7,0:7:18.05:0,18,216	0/0:26,0:26:50.36:0,50,636	0/0:6,0:6:12.04:0,12,150	1/1:4,14:20:10.67:522,11,0	1/1:6,10:15:18.01:218,18,0	1/1:2,1:3:5.96:73,6,0
chr10	92383923	.	C	CCG	3869.41	PASS	AC=22;AF=0.407;AN=54;BaseQRankSum=-8.793;DP=405;FS=8.305;HRun=0;HaplotypeScore=93.7929;InbreedingCoeff=0.8949;MQ=73.80;MQ0=2;MQRankSum=0.068;QD=28.24;ReadPosRankSum=2.870;VQSLOD=4.8954;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:46.04:0,46,369	0/0:3,0:3:3:0,3,27	0/0:36,0:19:42.91:0,43,421	0/0:18,0:11:8.96:0,9,102	./.	0/0:12,0:12:26.97:0,27,226	0/0:28,0:28:65.52:0,66,524	1/1:13,0:13:26.61:290,27,0	0/0:7,0:7:14.97:0,15,121	1/1:13,0:13:29.86:291,30,0	1/1:2,0:2:3.01:44,3,0	1/1:16,1:17:36.65:447,37,0	1/1:8,0:8:21.06:282,21,0	1/1:18,0:18:36.11:497,36,0	0/0:16,0:16:44.99:0,45,390	0/0:14,0:14:38.90:0,39,321	0/0:31,0:31:56.56:0,57,481	1/1:16,10:26:51.76:733,52,0	0/0:13,0:13:36.66:0,37,274	0/0:2,0:2:2.99:0,3,23	0/0:23,0:23:62.33:0,62,479	1/1:3,0:3:9.02:111,9,0	1/1:6,0:6:17.71:169,18,0	1/1:23,0:23:57.13:782,57,0	1/1:8,0:8:19.79:224,20,0	0/0:23,0:23:23.32:0,23,422	0/0:13,0:12:23.66:0,24,187	0/0:4,0:4:11.01:0,11,76
chr10	92383924	.	C	CG	2552.15	PASS	AC=22;AF=0.407;AN=54;BaseQRankSum=-5.675;DP=400;FS=7.409;HRun=0;HaplotypeScore=85.8792;InbreedingCoeff=0.9059;MQ=74.05;MQ0=2;MQRankSum=1.812;QD=19.05;ReadPosRankSum=3.826;VQSLOD=5.9729;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:50.60:0,51,363	0/0:3,0:3:5.68:0,6,38	0/0:36,0:19:32.55:0,33,337	0/0:18,0:11:14.96:0,15,90	./.	0/0:12,0:12:29.42:0,29,209	0/0:27,0:27:65.27:0,65,448	1/1:6,6:12:22.59:182,23,0	0/0:8,0:8:14.76:0,15,98	1/1:2,10:12:29.50:245,30,0	1/1:0,1:1:3:25,3,0	1/1:3,12:16:30.46:344,30,0	1/1:3,6:9:23.80:225,24,0	1/1:0,17:18:35.76:359,36,0	0/0:16,0:16:44.58:0,45,318	0/0:14,0:14:38.51:0,39,254	0/0:31,0:31:56.64:0,57,421	1/1:12,14:26:44.44:456,44,0	0/0:13,0:13:36.57:0,37,229	0/0:2,0:2:2.90:0,3,17	0/0:23,0:23:62.02:0,62,413	1/1:1,2:3:8.99:74,9,0	1/1:0,5:6:17.92:189,18,0	1/1:4,19:23:53.08:505,53,0	1/1:4,4:8:15.78:158,16,0	0/0:21,1:22:36.88:0,37,355	0/0:13,0:12:23.35:0,23,152	0/0:3,0:3:8.88:0,9,60
chr10	92383930	.	C	CA	5164.62	PASS	AB=0.986;AC=52;AF=0.929;AN=56;BaseQRankSum=-2.685;DP=390;FS=0.832;HRun=7;HaplotypeScore=79.4003;InbreedingCoeff=0.4401;MQ=70.61;MQ0=2;MQRankSum=-1.242;QD=14.00;ReadPosRankSum=2.213;VQSLOD=4.5815;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:32.20:0,32,201	1/1:4,0:4:10.24:82,10,0	0/1:33,1:17:9.83:10,0,123	0/1:17,0:10:1.84:2,0,42	1/1:3,0:3:3:27,3,0	1/1:10,0:10:23.23:150,23,0	1/1:28,0:28:58.59:391,59,0	1/1:8,4:12:29.98:262,30,0	1/1:7,0:7:14.63:95,15,0	1/1:5,4:9:21.90:195,22,0	1/1:0,1:1:3:25,3,0	1/1:8,8:16:19.56:250,20,0	1/1:4,6:10:24.01:222,24,0	1/1:4,11:15:34.24:313,34,0	1/1:17,0:17:27.08:181,27,0	1/1:13,0:13:32.16:192,32,0	1/1:37,0:37:74.13:524,74,0	1/1:11,14:25:48.74:403,49,0	1/1:11,0:11:17.41:109,17,0	1/1:2,0:2:2.96:20,3,0	1/1:21,0:21:48.48:306,48,0	1/1:0,2:2:5.99:49,6,0	1/1:2,4:6:12.59:90,13,0	1/1:8,15:23:55.53:502,56,0	1/1:3,4:7:21.02:198,21,0	1/1:21,1:22:52.30:336,52,0	1/1:12,0:12:15.65:126,16,0	1/1:5,0:5:14.78:107,15,0
chr10	92384402	.	CT	C	6131.45	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=13.537;DP=505;FS=0.000;HRun=4;HaplotypeScore=50.0902;InbreedingCoeff=0.9408;MQ=81.90;MQ0=0;MQRankSum=-2.821;QD=31.77;ReadPosRankSum=1.355;VQSLOD=4.9375;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.29:0,87,1211	0/0:4,0:4:12.04:0,12,166	0/0:5,0:5:6.02:0,6,84	0/0:22,0:22:54.16:0,54,718	0/0:9,0:9:24.07:0,24,319	0/0:17,0:17:48.13:0,48,638	0/0:38,0:38:99:0,102,1410	1/1:0,18:18:54.16:635,54,0	0/0:15,0:15:45.15:0,45,629	1/1:1,16:17:45.14:539,45,0	1/1:0,5:5:15.04:176,15,0	1/1:1,31:32:90.28:1080,90,0	1/1:0,14:14:39.12:468,39,0	1/1:0,22:22:63.19:754,63,0	0/0:15,0:15:45.15:0,45,624	0/0:17,0:17:51.16:0,51,697	0/0:33,0:33:99:0,99,1333	1/1:0,22:22:48.15:576,48,0	0/0:13,0:13:36.11:0,36,487	0/0:4,0:4:12.04:0,12,168	0/0:56,0:56:99:0,166,2301	1/1:2,9:11:24.07:288,24,0	1/1:0,3:3:9.03:108,9,0	1/1:1,30:31:81.25:968,81,0	1/1:1,17:18:45.14:539,45,0	0/0:13,1:14:3.12:0,3,468	0/0:10,0:10:30.10:0,30,417	0/0:10,0:10:30.09:0,30,402
chr10	92385941	.	CGGGG	C	2240.34	PASS	AB=0.743;AC=19;AF=0.339;AN=56;BaseQRankSum=7.615;DP=549;FS=30.417;HRun=10;HaplotypeScore=81.1784;InbreedingCoeff=0.6816;MQ=43.12;MQ0=61;MQRankSum=-7.653;QD=15.45;ReadPosRankSum=3.592;VQSLOD=-0.1649;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:40:71.83:0,72,1561	0/0:10,0:10:24.08:0,24,522	0/0:52,0:5:7.57:0,8,78	0/0:32,0:2:0.77:0,1,61	0/0:25,0:24:35.55:0,36,753	0/0:18,0:18:39.13:0,39,866	0/0:16,0:13:27.09:0,27,580	1/1:5,5:12:17.08:270,17,0	0/0:19,0:19:39.09:0,39,907	1/1:5,9:14:23.99:373,24,0	1/1:5,4:13:14.99:198,15,0	1/1:7,6:12:14.81:239,15,0	0/1:4,2:7:96.89:117,0,97	1/1:2,8:11:15.05:228,15,0	0/0:11,0:11:15.05:0,15,324	0/0:17,0:16:36.11:0,36,775	0/0:35,0:33:69.21:0,69,1438	1/1:6,9:16:24.07:366,24,0	0/0:18,0:20:45.15:0,45,929	0/0:18,0:18:39.13:0,39,904	0/0:21,0:19:34.99:0,35,798	1/1:4,2:7:12.03:169,12,0	0/1:14,2:16:99:189,0,140	0/1:10,3:16:53.26:202,0,53	1/1:4,2:9:6.01:89,6,0	0/0:27,0:26:54.18:0,54,1138	0/0:14,0:13:26.77:0,27,577	0/0:21,0:20:39.13:0,39,791
chr10	92386924	.	G	GA	6701.14	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-11.653;DP=471;FS=2.079;HRun=3;HaplotypeScore=46.8264;InbreedingCoeff=0.9811;MQ=76.90;MQ0=0;MQRankSum=-0.164;QD=38.73;ReadPosRankSum=-0.941;VQSLOD=4.5240;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:87.27:0,87,1044	0/0:9,0:9:27.08:0,27,322	0/0:9,0:9:24.07:0,24,288	0/0:11,0:11:26.91:0,27,301	0/0:23,0:23:66.20:0,66,792	0/0:14,0:13:33.09:0,33,384	0/0:21,0:21:63.18:0,63,743	1/1:0,16:16:45.15:630,45,0	0/0:8,0:8:24.07:0,24,288	1/1:1,20:21:60.20:841,60,0	1/1:1,18:19:48.16:672,48,0	1/1:0,17:17:45.15:630,45,0	1/1:0,9:9:27.09:378,27,0	1/1:0,14:14:42.14:588,42,0	0/0:10,0:10:30.09:0,30,359	0/0:10,0:10:27.08:0,27,324	0/0:19,0:19:54.16:0,54,648	1/1:2,28:30:84.25:1156,84,0	0/0:13,0:13:30.05:0,30,327	0/0:21,0:21:63.17:0,63,733	0/0:45,0:45:99:0,123,1460	1/1:0,7:7:21.07:294,21,0	1/1:0,14:14:39.13:546,39,0	1/1:0,13:13:36.12:504,36,0	1/1:1,12:13:33.11:462,33,0	0/0:23,1:24:5.34:0,5,714	0/0:14,0:14:42.13:0,42,504	0/0:13,0:13:39.12:0,39,468
chr10	92386999	.	CTT	C	2240.29	PASS	AB=0.720;AC=24;AF=0.429;AN=56;BaseQRankSum=-1.398;DP=480;FS=5.318;HRun=15;HaplotypeScore=76.7675;InbreedingCoeff=0.5512;MQ=72.29;MQ0=6;MQRankSum=0.990;QD=10.32;ReadPosRankSum=2.379;VQSLOD=2.5993;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:34:82.77:0,83,890	0/0:14,0:14:29.42:0,29,354	0/1:30,0:14:13.31:13,0,61	0/0:18,0:14:11.96:0,12,98	0/0:12,0:28:39.35:0,39,136	0/0:18,0:19:53.63:0,54,656	0/0:9,0:9:24.08:0,24,326	1/1:15,9:22:29.10:272,29,0	0/1:1,1:6:10.43:10,0,59	1/1:7,4:12:17.71:194,18,0	1/1:4,7:12:26.20:225,26,0	1/1:4,15:19:50.89:436,51,0	1/1:2,3:5:8.94:70,9,0	0/1:7,4:11:0.69:136,0,1	0/0:17,0:19:42.58:0,43,531	0/0:13,0:12:17.54:0,18,211	0/0:19,0:22:49.57:0,50,549	1/1:9,14:27:41.09:422,41,0	0/0:14,1:22:4.12:0,4,156	0/0:10,0:22:19.92:0,20,225	0/1:10,2:21:25.88:26,0,90	1/1:0,3:3:9:79,9,0	0/1:3,4:7:12.33:77,0,12	1/1:2,8:11:17.85:202,18,0	1/1:8,9:17:7.97:251,8,0	0/0:6,1:18:12.23:0,12,125	0/0:10,0:23:45.41:0,45,188	0/1:8,2:12:27.76:28,0,92
chr10	92387263	.	C	CT	8123.26	PASS	AB=0.889;AC=23;AF=0.411;AN=56;BaseQRankSum=-11.941;DP=599;FS=1.030;HRun=5;HaplotypeScore=61.3570;InbreedingCoeff=0.8983;MQ=71.36;MQ0=0;MQRankSum=0.383;QD=34.28;ReadPosRankSum=-1.373;VQSLOD=4.6564;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.08:0,87,964	0/0:7,0:7:21.06:0,21,238	0/0:24,0:23:54.09:0,54,576	0/1:7,0:8:24.86:25,0,80	0/0:17,0:17:48.13:0,48,539	0/0:31,0:31:87.25:0,87,984	0/0:24,0:24:66.18:0,66,742	1/1:2,28:30:84.22:1078,84,0	0/0:18,0:18:36.10:0,36,406	1/1:1,19:20:54.17:722,54,0	1/1:1,16:17:48.16:649,48,0	1/1:0,17:17:36.12:492,36,0	1/1:2,14:16:39.13:531,39,0	1/1:0,18:18:48.16:656,48,0	0/0:21,0:21:57.16:0,57,644	0/0:21,0:21:57.16:0,57,646	0/0:39,0:39:99:0,117,1327	1/1:8,24:32:87.29:1180,87,0	0/0:20,0:20:51.13:0,51,568	0/0:18,0:18:51.13:0,51,569	0/0:17,0:17:39.08:0,39,428	1/1:0,13:13:33.11:451,33,0	1/1:1,14:15:32.95:451,33,0	1/1:1,36:37:99:1477,108,0	1/1:0,14:14:30.10:410,30,0	0/0:27,2:29:2.17:0,2,803	0/0:32,0:32:90.22:0,90,998	0/0:12,0:12:33.09:0,33,374
chr10	92389751	.	C	CG	5594.38	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=2.582;DP=419;FS=17.668;HRun=1;HaplotypeScore=76.1303;InbreedingCoeff=0.9403;MQ=65.38;MQ0=5;MQRankSum=-6.864;QD=33.91;ReadPosRankSum=3.924;VQSLOD=3.2215;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:45.13:0,45,565	0/0:3,0:3:6:0,6,52	0/0:29,0:14:26.85:0,27,309	0/0:16,0:7:11.22:0,11,96	0/0:18,0:18:33.55:0,34,274	0/0:9,0:9:12.39:0,12,95	0/0:14,0:13:14.31:0,14,89	1/1:20,15:35:90.14:1118,90,0	0/0:13,0:13:29.98:0,30,254	1/1:1,12:13:36.10:514,36,0	1/1:3,16:19:41.79:587,42,0	1/1:3,7:10:18.05:263,18,0	1/1:1,10:11:33.11:480,33,0	1/1:2,3:6:18.04:227,18,0	0/0:11,0:10:14.44:0,14,107	0/0:6,0:6:17.36:0,17,125	0/0:18,0:18:21.17:0,21,181	1/1:6,11:17:45:552,45,0	0/0:12,0:12:35.88:0,36,294	0/0:18,0:18:35.88:0,36,291	0/0:10,0:10:5.99:0,6,51	1/1:0,10:10:23.87:295,24,0	1/1:0,18:18:45.15:657,45,0	1/1:5,3:7:12.03:159,12,0	1/1:4,14:18:51.17:743,51,0	0/0:24,1:25:11.17:0,11,407	0/0:10,0:10:18.85:0,19,149	0/0:22,0:22:62.42:0,62,554
chr10	92389760	.	TTG	T	1907.99	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-10.977;DP=436;FS=0.899;HRun=0;HaplotypeScore=86.8449;InbreedingCoeff=0.5005;MQ=55.38;MQ0=18;MQRankSum=2.864;QD=7.82;ReadPosRankSum=-7.997;VQSLOD=0.5437;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:23:38.68:0,39,456	0/1:7,0:7:3.51:76,0,4	0/0:35,0:11:11.91:0,12,155	0/0:24,0:6:0.93:0,1,53	1/1:17,1:18:36.15:260,36,0	1/1:12,0:12:0.56:40,1,0	0/1:15,0:14:1.81:128,0,2	0/1:33,0:33:63.78:64,0,197	1/1:10,0:10:13.79:98,14,0	0/0:13,0:13:33.41:0,33,209	0/0:18,0:18:20.76:0,21,203	0/1:9,0:9:0.42:0,0,95	0/0:15,0:15:9.37:0,9,101	0/1:7,0:7:5.79:6,0,39	0/1:11,0:9:5.14:40,0,5	0/1:7,0:7:3.08:39,0,3	1/1:21,0:20:12.39:118,12,0	0/0:14,0:14:6.37:0,6,116	1/1:13,2:14:9.03:245,9,0	1/1:14,0:14:15.38:171,15,0	1/1:9,0:9:4.21:23,4,0	0/0:6,0:6:17.41:0,17,99	0/0:15,0:15:29.85:0,30,162	0/0:7,0:6:10.51:0,11,66	0/0:19,0:18:45.39:0,45,212	1/1:21,1:22:48.66:416,49,0	1/1:15,1:16:12.27:103,12,0	1/1:17,1:18:22.75:268,23,0
chr10	92389765	.	T	TTTG	5589.16	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=5.916;DP=440;FS=0.425;HRun=0;HaplotypeScore=83.2258;InbreedingCoeff=0.8339;MQ=54.41;MQ0=21;MQRankSum=-3.328;QD=26.74;ReadPosRankSum=5.227;VQSLOD=4.3992;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:24:50.98:0,51,616	0/0:7,0:7:5.13:0,5,117	0/0:35,0:11:8.51:0,9,118	0/1:26,0:7:2.20:2,0,37	0/0:18,0:18:41.60:0,42,343	0/0:12,0:12:14.73:0,15,98	0/0:13,0:12:24.19:0,24,174	1/1:21,12:35:52.94:907,53,0	0/0:9,0:9:20.90:0,21,174	1/1:10,5:15:39:496,39,0	1/1:11,6:17:44.85:579,45,0	1/1:5,5:10:29.47:394,29,0	1/1:3,11:16:33.01:559,33,0	1/1:3,5:8:20.89:313,21,0	0/0:11,0:9:10.80:0,11,118	0/0:7,0:7:8.82:0,9,122	0/1:20,0:19:5.19:5,0,169	1/1:4,10:15:29.10:473,29,0	0/0:13,0:12:35.93:0,36,330	0/0:13,0:13:32.65:0,33,248	0/0:9,0:9:5.93:0,6,40	1/1:3,4:7:17.95:273,18,0	1/1:2,12:14:41.93:686,42,0	1/1:2,4:6:12.02:198,12,0	1/1:7,11:17:48.02:704,48,0	0/0:21,0:21:52.86:0,53,443	0/0:17,0:17:27.36:0,27,229	0/0:19,0:16:27.64:0,28,381
chr10	92389766	.	T	TTG	2860.05	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=10.158;DP=440;FS=0.421;HRun=0;HaplotypeScore=83.4677;InbreedingCoeff=0.7801;MQ=54.17;MQ0=22;MQRankSum=-4.555;QD=15.05;ReadPosRankSum=6.731;VQSLOD=3.2300;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:24:50.89:0,51,569	0/0:7,0:7:5.22:0,5,118	0/0:36,0:11:6.18:0,6,117	0/1:26,0:7:1.25:1,0,29	0/0:18,0:18:41.71:0,42,346	0/0:12,0:12:14.78:0,15,100	0/0:13,0:12:26.70:0,27,191	0/1:35,0:35:42.44:373,0,42	0/0:9,0:9:21.40:0,21,175	1/1:15,0:15:27.28:305,27,0	1/1:15,2:17:31.88:401,32,0	1/1:10,0:10:1.81:183,2,0	1/1:15,0:16:32.86:274,33,0	1/1:9,0:8:19.53:156,20,0	0/0:11,0:9:11.10:0,11,122	0/0:7,0:7:8.96:0,9,119	0/0:20,0:19:17.30:0,17,191	1/1:14,1:15:29:277,29,0	0/0:13,0:12:35.90:0,36,313	0/0:13,0:13:32.62:0,33,247	0/0:8,0:7:5.93:0,6,40	1/1:6,1:7:17.94:171,18,0	1/1:15,0:15:41.83:367,42,0	1/1:7,0:6:12:117,12,0	1/1:17,1:17:47.61:441,48,0	0/0:20,0:20:53.06:0,53,417	0/0:16,0:16:27.35:0,27,222	0/0:20,0:17:33.40:0,33,410
chr10	92390203	.	CTTTGTGTGTGTGTG	C	2874.70	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=1.987;DP=496;FS=6.214;HRun=0;HaplotypeScore=182.4699;InbreedingCoeff=0.8004;MQ=62.13;MQ0=13;MQRankSum=0.318;QD=15.37;ReadPosRankSum=-0.012;VQSLOD=2.2962;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:80.90:0,81,1305	0/0:8,0:8:20.97:0,21,230	0/0:17,0:10:27:0,27,277	0/0:21,0:14:35.95:0,36,350	0/0:12,0:11:17.46:0,17,260	0/0:13,0:13:35.97:0,36,359	0/1:23,0:21:4.02:4,0,310	1/1:18,0:18:40.11:347,40,0	0/0:21,0:21:59.94:0,60,942	1/1:1,10:10:29.91:344,30,0	1/1:10,0:10:11.99:100,12,0	1/1:23,0:24:59.76:721,60,0	1/1:1,0:13:2.75:40,3,0	1/1:14,0:14:26.50:194,27,0	0/0:16,0:16:38.72:0,39,667	0/0:27,0:26:48.22:0,48,629	0/0:21,0:21:53.76:0,54,550	1/1:13,0:13:38.67:313,39,0	0/0:17,0:16:47.69:0,48,399	0/0:9,0:8:23.93:0,24,242	0/0:55,0:55:99:0,150,1984	1/1:7,0:8:11.99:182,12,0	0/1:13,0:12:73.95:185,0,74	1/1:19,2:21:35.08:271,35,0	1/1:2,16:18:12.02:385,12,0	0/0:15,0:14:14.12:0,14,530	0/0:25,0:24:72.05:0,72,1034	0/0:2,0:2:3:0,3,25
chr10	92390205	.	TTGTGTG	T	787.44	PASS	AB=0.993;AC=24;AF=0.632;AN=38;BaseQRankSum=0.762;DP=519;FS=6.856;HRun=0;HaplotypeScore=129.9345;InbreedingCoeff=0.0772;MQ=59.79;MQ0=16;MQRankSum=0.406;QD=3.01;ReadPosRankSum=0.341;VQSLOD=2.0880;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:22.10:40,0,22	1/1:4,0:8:8.86:98,9,0	./.	./.	1/1:8,5:12:2.97:20,3,0	./.	1/1:16,0:19:6.02:84,6,0	0/0:20,0:20:0.89:0,1,2	1/1:19,3:22:2.96:59,3,0	1/1:11,0:10:2.91:42,3,0	./.	0/1:23,0:23:26.68:33,0,27	0/0:14,0:13:2.84:0,3,14	./.	1/1:15,0:15:9.49:118,9,0	1/1:18,0:26:6.96:85,7,0	0/1:22,0:22:10.35:12,0,10	0/0:17,0:16:0.94:0,1,2	./.	1/1:7,2:8:3.01:60,3,0	0/0:61,0:61:1.70:0,2,22	1/1:8,0:8:3.01:42,3,0	./.	./.	0/1:19,0:19:7.61:89,0,8	0/0:16,0:15:1.55:0,2,4	1/1:24,5:28:5.25:118,5,0	./.
chr10	92392059	.	CT	C	1894.57	PASS	AB=0.696;AC=17;AF=0.304;AN=56;BaseQRankSum=-3.208;DP=587;FS=0.000;HRun=13;HaplotypeScore=77.4439;InbreedingCoeff=0.6669;MQ=72.55;MQ0=5;MQRankSum=0.780;QD=8.03;ReadPosRankSum=2.130;VQSLOD=2.8420;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,2:37:39.37:0,39,617	0/0:8,1:9:2.13:0,2,182	1/1:27,1:12:2.68:18,3,0	0/0:21,0:16:12.21:0,12,100	1/1:6,14:21:21.34:226,21,0	0/1:16,4:20:45.61:46,0,241	0/0:20,1:21:10.25:0,10,388	0/0:37,0:38:77.62:0,78,432	1/1:4,9:15:25.42:166,25,0	0/0:23,1:24:23.96:0,24,208	0/0:15,0:15:22.73:0,23,116	0/0:19,0:19:28.99:0,29,157	0/0:12,0:12:20.20:0,20,119	0/0:14,0:14:31.37:0,31,171	0/0:12,0:12:27.02:0,27,253	0/0:15,0:15:14.24:0,14,287	0/0:26,2:28:27.82:0,28,556	0/0:23,0:23:42.91:0,43,236	0/1:12,18:31:69.11:313,0,69	1/1:8,15:23:38.68:282,39,0	1/1:5,12:18:25.86:181,26,0	0/0:11,0:11:17.19:0,17,95	0/0:16,0:15:19.95:0,20,110	0/0:18,0:18:37.03:0,37,190	0/0:17,0:17:28.71:0,29,162	1/1:8,22:32:40.49:440,40,0	1/1:8,21:29:46.88:349,47,0	0/1:8,11:19:34:70,0,34
chr10	92392072	.	T	TC	4296.66	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-9.160;DP=584;FS=8.593;HRun=1;HaplotypeScore=71.4449;InbreedingCoeff=0.9534;MQ=62.49;MQ0=6;MQRankSum=0.403;QD=19.71;ReadPosRankSum=0.548;VQSLOD=4.2850;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:71.16:0,71,835	0/0:9,0:9:24.01:0,24,285	0/0:24,0:5:1.83:0,2,31	0/0:22,0:11:19.20:0,19,158	0/0:25,0:25:49.37:0,49,310	0/0:18,0:18:47.78:0,48,471	0/0:23,0:25:62.53:0,63,657	1/1:7,28:37:88.16:874,88,0	0/0:16,0:16:41.33:0,41,277	1/1:2,21:23:57.11:653,57,0	1/1:8,8:16:17.03:307,17,0	1/1:2,17:21:19.53:335,20,0	1/1:2,9:11:15.88:174,16,0	1/1:2,15:17:16.90:334,17,0	0/0:8,0:8:24.06:0,24,284	0/0:14,0:15:44.87:0,45,489	0/0:27,0:27:77.86:0,78,840	1/1:4,19:23:24.61:445,25,0	0/0:31,0:31:80.70:0,81,592	0/0:19,0:19:46.76:0,47,279	0/0:17,0:17:38.39:0,38,254	1/1:0,8:9:17.95:193,18,0	1/1:1,19:18:9.48:218,9,0	1/1:4,20:24:22.15:441,22,0	1/1:1,15:16:24.22:321,24,0	0/0:28,0:28:73.67:0,74,485	0/0:29,0:30:62.03:0,62,418	0/0:17,0:17:26.72:0,27,200
chr10	92393415	.	AAAC	A	8591.59	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.829;DP=561;FS=1.488;HRun=0;HaplotypeScore=85.4204;InbreedingCoeff=0.9934;MQ=88.34;MQ0=0;MQRankSum=-6.693;QD=42.12;ReadPosRankSum=1.364;VQSLOD=6.2180;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,2955	0/0:7,0:7:21.07:0,21,442	0/0:31,0:31:90.31:0,90,1936	0/0:19,0:19:48.16:0,48,1024	0/0:15,0:15:45.15:0,45,974	0/0:19,0:19:54.19:0,54,1206	0/0:15,0:15:45.15:0,45,992	1/1:3,24:27:69.19:1012,69,0	0/0:25,0:25:75.24:0,75,1623	1/1:0,20:20:60.20:978,60,0	1/1:0,12:12:30.10:478,30,0	1/1:1,13:14:36.12:577,36,0	1/1:0,23:23:66.23:1077,66,0	1/1:0,18:18:48.14:784,48,0	0/0:22,0:22:66.23:0,66,1457	0/0:21,0:21:57.20:0,57,1264	0/0:14,0:14:42.14:0,42,924	1/1:2,20:22:54.18:872,54,0	0/0:21,0:21:51.17:0,51,1086	0/0:21,0:21:57.20:0,57,1269	0/0:31,0:31:93.31:0,93,2002	1/1:2,19:21:54.14:817,54,0	1/1:0,20:20:60.20:942,60,0	1/1:2,19:21:48.16:771,48,0	1/1:0,6:6:18.06:283,18,0	0/0:21,0:21:11.98:0,12,1196	0/0:21,0:21:63.22:0,63,1407	0/0:8,0:8:24.08:0,24,536
chr10	92393710	.	T	TA	2704.27	PASS	AB=0.695;AC=15;AF=0.268;AN=56;BaseQRankSum=-7.650;DP=532;FS=7.528;HRun=11;HaplotypeScore=61.2119;InbreedingCoeff=0.7081;MQ=73.94;MQ0=1;MQRankSum=-0.903;QD=16.19;ReadPosRankSum=-1.126;VQSLOD=3.7641;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:30:61.77:0,62,470	0/1:5,1:6:15.50:16,0,78	0/0:17,0:18:22.28:0,22,173	0/0:8,0:6:5.88:0,6,41	0/1:8,16:25:9.14:386,0,9	0/0:15,0:15:44.83:0,45,348	0/0:15,0:15:32.82:0,33,249	0/0:23,0:23:44.67:0,45,329	1/1:4,18:23:47.93:471,48,0	0/0:16,0:16:11.45:0,11,233	0/0:16,0:16:29.85:0,30,232	0/0:23,0:23:62.74:0,63,485	0/0:19,0:19:50.72:0,51,381	0/0:21,0:21:44.55:0,45,337	0/0:18,0:19:43.85:0,44,331	0/0:23,1:25:34.34:0,34,437	0/0:16,0:16:41.69:0,42,317	0/0:19,0:18:50.75:0,51,387	1/1:4,18:22:54.08:538,54,0	1/1:5,12:18:15.68:326,16,0	1/1:1,16:17:39.08:396,39,0	0/0:20,0:20:50.75:0,51,389	0/0:18,0:18:38.75:0,39,295	0/0:21,2:25:2.97:0,3,369	0/0:17,0:17:44.81:0,45,348	1/1:9,14:23:13.54:306,14,0	1/1:2,18:21:29.17:329,29,0	0/1:5,7:12:5.22:127,0,5
chr10	92395609	.	G	GGGTGGT	5921.36	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-4.561;DP=531;FS=1.084;HRun=0;HaplotypeScore=109.8345;InbreedingCoeff=0.9658;MQ=67.66;MQ0=0;MQRankSum=-11.210;QD=40.01;ReadPosRankSum=-1.138;VQSLOD=4.1961;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:93.28:0,93,1923	0/0:12,0:12:27.09:0,27,564	0/0:21,0:19:32.14:0,32,566	0/0:16,0:16:30.10:0,30,587	0/0:12,0:12:18.06:0,18,329	0/0:12,0:12:21.07:0,21,434	0/0:29,0:29:72.22:0,72,1460	0/0:20,0:20:39.09:0,39,691	0/0:19,0:19:39.11:0,39,777	1/1:5,4:10:8.97:143,9,0	1/1:3,3:6:6.02:199,6,0	1/1:5,9:15:27.04:749,27,0	1/1:5,10:15:18.06:598,18,0	1/1:7,10:19:30.05:901,30,0	0/0:19,0:19:42.14:0,42,897	0/0:22,0:22:39.12:0,39,748	0/0:33,0:33:78.23:0,78,1604	1/1:7,13:21:27.09:895,27,0	0/0:22,0:21:39.11:0,39,756	0/0:10,0:10:21.07:0,21,449	0/0:44,0:44:92.11:0,92,1832	1/1:8,6:16:18.06:598,18,0	1/1:8,7:15:21.07:689,21,0	1/1:5,8:15:14.67:434,15,0	1/1:6,8:16:24.01:715,24,0	0/0:18,0:18:24.03:0,24,430	0/0:19,0:19:51.15:0,51,1012	0/0:9,0:9:24.07:0,24,474
chr10	92395783	.	TTGTGTGTGTGTGTGCG	T	1890.46	PASS	AB=1.000;AC=20;AF=0.370;AN=54;BaseQRankSum=-1.897;DP=612;FS=20.777;HRun=0;HaplotypeScore=227.0182;InbreedingCoeff=0.6621;MQ=71.91;MQ0=19;MQRankSum=-2.546;QD=7.94;ReadPosRankSum=0.711;VQSLOD=1.2211;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:31.38:0,31,1003	0/0:4,0:4:3:0,3,25	0/0:38,0:18:16.41:0,16,166	0/1:48,0:33:8.01:8,0,340	0/0:14,0:14:29.92:0,30,625	0/0:19,0:19:41.82:0,42,1194	0/0:29,0:28:50.97:0,51,1460	0/1:34,0:32:65.20:308,0,65	0/0:21,0:21:38.97:0,39,1474	1/1:24,2:26:43.95:584,44,0	1/1:8,0:8:17.99:175,18,0	1/1:6,10:16:3.01:135,3,0	1/1:2,11:13:2.69:134,3,0	1/1:7,12:16:2.76:134,3,0	0/0:23,0:23:44.25:0,44,1555	0/0:24,0:24:44.98:0,45,1373	0/0:26,0:25:62.92:0,63,1750	1/1:22,0:21:34.18:367,34,0	0/0:18,0:16:32.90:0,33,926	0/0:15,0:14:15.33:0,15,245	0/0:46,0:45:91.40:0,91,2932	./.	1/1:9,0:8:8.92:79,9,0	1/1:7,20:26:2.83:76,3,0	1/1:0,16:16:3.01:73,3,0	0/0:28,0:29:72.51:0,73,2112	0/0:15,0:15:26.98:0,27,1129	0/0:17,0:17:17.92:0,18,669
chr10	92395798	.	CGT	C	459.63	PASS	AB=0.952;AC=22;AF=0.458;AN=48;BaseQRankSum=0.584;DP=581;FS=2.812;HRun=0;HaplotypeScore=98.5692;InbreedingCoeff=0.3040;MQ=56.19;MQ0=20;MQRankSum=0.951;QD=1.65;ReadPosRankSum=1.732;VQSLOD=1.6069;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:10.82:46,11,0	1/1:3,0:3:1.25:3,1,0	./.	./.	0/0:18,0:18:8.32:0,8,61	0/1:16,2:18:33.35:57,0,33	1/1:17,12:29:8.40:99,8,0	0/0:34,0:32:7.18:0,7,38	0/0:21,0:21:11.99:0,12,102	0/1:18,0:17:18.47:18,0,19	0/0:8,0:8:2.88:0,3,15	0/1:12,0:12:7.79:8,0,19	1/1:11,0:11:2.84:14,3,0	1/1:15,0:12:2.84:14,3,0	1/1:25,0:29:18.90:78,19,0	1/1:14,11:26:8.87:137,9,0	0/1:23,1:29:9.01:118,0,9	0/0:21,0:19:2.99:0,3,23	0/1:18,0:16:10.54:11,0,70	1/1:18,0:17:2.41:10,2,0	0/0:44,0:42:35.04:0,35,313	./.	./.	0/1:24,0:23:0:0,0,0	0/0:16,0:16:2.92:0,3,17	0/0:24,0:33:35.61:0,36,313	0/0:16,0:16:11.50:0,12,120	0/0:12,0:13:6.43:0,6,46
chr10	92397630	.	TC	T	6633.68	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=13.391;DP=659;FS=5.840;HRun=6;HaplotypeScore=68.2159;InbreedingCoeff=0.9110;MQ=72.87;MQ0=0;MQRankSum=0.554;QD=25.61;ReadPosRankSum=1.954;VQSLOD=5.2487;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,1619	0/0:8,0:8:24.08:0,24,315	0/1:14,0:14:27.35:27,0,298	0/0:16,0:16:5.85:0,6,333	0/0:33,0:33:87.24:0,87,1098	0/0:16,0:16:42.12:0,42,537	0/0:30,0:30:81.22:0,81,1045	1/1:0,13:13:36.06:372,36,0	0/0:25,0:25:66.21:0,66,865	1/1:1,17:18:45.09:473,45,0	1/1:1,19:20:48.12:515,48,0	1/1:4,22:26:66.17:709,66,0	1/1:3,19:22:48.12:516,48,0	1/1:3,27:30:75.19:806,75,0	0/0:28,0:28:81.26:0,81,1064	0/0:20,0:20:57.17:0,57,734	0/0:34,0:34:90.27:0,90,1165	1/1:1,22:23:63.16:677,63,0	0/0:22,0:22:60.18:0,60,774	0/0:17,0:17:45.15:0,45,591	0/0:45,0:45:99:0,129,1667	1/1:0,26:26:72.18:774,72,0	1/1:3,17:20:48.11:509,48,0	1/1:2,31:33:81.20:871,81,0	1/1:1,13:14:36.09:386,36,0	0/0:30,0:30:84.26:0,84,1091	0/0:20,0:20:54.15:0,54,675	0/0:11,0:11:30.05:0,30,348
chr10	92398228	.	G	GA	4538.15	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-16.614;DP=830;FS=0.000;HRun=9;HaplotypeScore=77.1516;InbreedingCoeff=0.9848;MQ=74.47;MQ0=0;MQRankSum=-1.441;QD=26.38;ReadPosRankSum=1.681;VQSLOD=5.0896;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:89.97:0,90,781	1/1:2,10:12:27.03:276,27,0	0/0:20,1:21:15.10:0,15,347	0/0:13,0:13:9.04:0,9,144	0/0:41,0:42:97.97:0,98,836	1/1:1,23:24:66.18:730,66,0	1/1:2,31:33:78.21:863,78,0	0/0:31,0:31:50.93:0,51,637	0/0:40,0:40:99:0,108,934	0/0:40,0:40:99:0,108,934	0/0:20,1:22:28.72:0,29,456	0/0:30,0:30:83.98:0,84,729	0/0:35,0:35:95.96:0,96,829	0/0:29,0:29:83.02:0,83,709	1/1:3,33:35:64.19:937,64,0	1/1:5,30:35:64.19:936,64,0	1/1:6,26:32:72.19:797,72,0	0/0:19,0:19:47.98:0,48,417	0/0:29,1:31:45.30:0,45,595	0/0:32,0:32:83.95:0,84,726	0/0:28,0:28:77.95:0,78,669	0/0:40,0:40:99:0,111,960	0/0:26,0:26:71.97:0,72,625	0/0:34,0:34:92.97:0,93,807	0/0:23,0:23:59.98:0,60,521	0/0:32,0:33:92:0,92,784	0/0:39,0:39:99:0,105,911	0/0:16,0:16:47.99:0,48,417
chr10	92398922	.	ATG	A	9658.79	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.617;DP=684;FS=4.365;HRun=0;HaplotypeScore=80.6543;InbreedingCoeff=0.9997;MQ=86.64;MQ0=0;MQRankSum=-4.577;QD=38.95;ReadPosRankSum=1.243;VQSLOD=6.3848;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,166,2992	0/0:10,0:10:30.10:0,30,550	0/0:29,0:29:84.27:0,84,1465	0/0:16,0:16:42.07:0,42,714	0/0:19,0:19:51.17:0,51,927	0/0:19,0:19:57.20:0,57,1044	0/0:23,0:23:69.24:0,69,1264	1/1:3,26:28:78.22:1064,78,0	0/0:21,0:21:63.22:0,63,1154	1/1:3,23:26:72.24:1032,72,0	1/1:1,16:17:45.15:644,45,0	1/1:0,26:26:72.24:1031,72,0	1/1:0,22:22:60.20:859,60,0	1/1:0,28:28:78.26:1117,78,0	0/0:23,0:23:59.92:0,60,1068	0/0:27,0:27:81.28:0,81,1485	0/0:23,0:23:69.21:0,69,1221	1/1:0,15:15:39.13:559,39,0	0/0:19,0:19:54.18:0,54,968	0/0:23,0:23:66.23:0,66,1203	0/0:55,0:55:99:0,166,3013	1/1:0,13:13:36.12:516,36,0	1/1:0,11:11:27.09:387,27,0	1/1:1,36:37:99:1418,99,0	1/1:0,24:24:72.24:1031,72,0	0/0:32,0:32:96.33:0,96,1745	0/0:31,0:31:90.24:0,90,1552	0/0:10,0:10:30.10:0,30,550
chr10	92399175	.	ACT	A	4903.86	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.783;DP=638;FS=0.000;HRun=0;HaplotypeScore=77.2246;InbreedingCoeff=0.9999;MQ=90.94;MQ0=0;MQRankSum=-3.201;QD=39.55;ReadPosRankSum=3.074;VQSLOD=6.4181;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,2269	1/1:0,15:15:45.15:663,45,0	0/0:32,0:32:75.18:0,75,1529	0/0:22,0:21:51.98:0,52,817	0/0:15,0:15:42.14:0,42,787	1/1:0,16:16:42.14:619,42,0	1/1:1,16:17:39.13:574,39,0	0/0:27,0:27:75.26:0,75,1405	0/0:17,0:17:48.16:0,48,899	0/0:23,0:23:69.24:0,69,1293	0/0:17,0:17:45.15:0,45,843	0/0:19,0:19:57.18:0,57,1026	0/0:26,0:26:78.27:0,78,1455	0/0:26,0:26:75.26:0,75,1405	1/1:0,29:29:81.27:1193,81,0	1/1:1,22:23:60.20:884,60,0	1/1:1,23:24:66.22:972,66,0	0/0:22,0:22:63.19:0,63,1146	0/0:19,0:19:57.20:0,57,1068	0/0:15,0:15:45.15:0,45,843	0/0:34,0:34:99:0,99,1844	0/0:14,0:14:42.14:0,42,786	0/0:17,0:17:51.16:0,51,922	0/0:29,0:29:81.26:0,81,1485	0/0:32,0:32:93.29:0,93,1671	0/0:22,0:22:66.23:0,66,1237	0/0:31,0:31:87.30:0,87,1630	0/0:12,0:12:36.12:0,36,674
chr10	92399887	.	A	AT	5582.33	PASS	AB=0.805;AC=36;AF=0.643;AN=56;BaseQRankSum=-8.380;DP=660;FS=0.000;HRun=14;HaplotypeScore=81.6565;InbreedingCoeff=0.5230;MQ=75.42;MQ0=0;MQRankSum=0.488;QD=10.84;ReadPosRankSum=-0.734;VQSLOD=4.1897;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,29:40:30.28:503,30,0	0/1:4,10:14:4.26:204,0,4	0/1:22,0:17:6.68:7,0,27	0/1:18,0:14:3.07:3,0,17	0/1:35,0:37:11:11,0,343	1/1:5,21:28:0.14:227,0,0	1/1:2,14:16:22.73:324,23,0	1/1:13,20:34:27.28:474,27,0	0/0:35,0:35:48.09:0,48,310	1/1:7,25:33:16.27:522,16,0	0/1:11,11:24:71.44:202,0,71	1/1:10,17:28:20.38:277,20,0	1/1:4,13:18:11.25:219,11,0	1/1:17,9:27:28.45:342,28,0	1/1:8,20:29:22.70:343,23,0	0/1:9,22:32:0.15:353,0,0	1/1:3,9:14:26.68:213,27,0	1/1:2,12:14:10.73:218,11,0	0/0:12,1:13:19.72:0,20,120	0/0:16,1:18:9:0,9,181	0/0:16,0:15:31.45:0,31,197	1/1:3,19:25:1.57:300,2,0	1/1:5,13:19:20.45:284,20,0	1/1:2,14:17:15.89:291,16,0	1/1:8,17:26:3.30:266,3,0	0/0:19,2:21:34.69:0,35,215	0/0:30,0:32:57.06:0,57,354	0/0:7,0:9:12.86:0,13,69
chr10	92401139	.	AG	A	3640.17	PASS	AB=0.846;AC=30;AF=0.536;AN=56;BaseQRankSum=5.331;DP=501;FS=7.070;HRun=10;HaplotypeScore=76.1588;InbreedingCoeff=0.6821;MQ=82.66;MQ0=0;MQRankSum=-1.273;QD=11.56;ReadPosRankSum=4.707;VQSLOD=2.9534;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:17:23.52:0,24,171	1/1:2,0:11:16.12:48,16,0	0/0:22,0:20:14.35:0,14,111	0/1:22,1:18:26.27:26,0,133	1/1:10,10:20:35.98:312,36,0	1/1:4,0:13:18.33:54,18,0	1/1:5,0:26:36.66:108,37,0	0/0:19,1:22:4.33:0,4,255	1/1:3,15:18:50.99:443,51,0	0/0:17,1:18:16.05:0,16,399	0/0:6,0:6:18.05:0,18,196	0/0:15,1:16:10.03:0,10,331	0/0:24,0:24:66.16:0,66,718	0/0:15,0:15:42.11:0,42,464	1/1:3,0:27:46.06:134,46,0	1/1:1,0:15:31.50:106,32,0	1/1:1,0:21:40.74:120,41,0	0/0:14,0:14:31.60:0,32,317	1/1:4,10:14:32.95:280,33,0	1/1:4,11:15:23.97:208,24,0	1/1:11,24:35:80.95:700,81,0	0/1:3,1:4:24.18:43,0,24	0/0:6,0:6:15.04:0,15,166	0/0:25,0:25:69.13:0,69,749	0/1:16,2:18:38.84:39,0,263	0/1:10,6:16:9.11:154,0,9	1/1:5,25:32:85.04:711,85,0	1/1:1,6:7:18:156,18,0
chr10	92401525	.	TG	T	10029.39	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=8.863;DP=670;FS=1.024;HRun=8;HaplotypeScore=69.1530;InbreedingCoeff=0.9996;MQ=65.09;MQ0=1;MQRankSum=1.641;QD=23.49;ReadPosRankSum=4.480;VQSLOD=5.4425;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,40:44:99:1014,105,0	1/1:0,11:11:33.05:318,33,0	0/0:24,0:20:51.12:0,51,594	0/0:29,0:28:72:0,72,808	0/0:22,0:21:36.08:0,36,411	1/1:2,14:16:36.06:347,36,0	1/1:1,26:27:66.11:637,66,0	1/1:6,16:21:48.05:452,48,0	0/0:20,0:20:60.14:0,60,698	1/1:4,30:34:87.09:830,87,0	1/1:1,17:18:42.07:406,42,0	1/1:2,18:20:45.06:434,45,0	1/1:2,25:27:72.11:695,72,0	1/1:3,18:21:54.08:521,54,0	1/1:1,15:16:30.05:290,30,0	1/1:4,38:42:99:1043,108,0	1/1:4,25:29:72.11:695,72,0	1/1:3,26:29:78.12:753,78,0	0/0:17,0:16:42.10:0,42,484	0/0:19,1:20:26.39:0,26,549	0/0:32,0:32:78.20:0,78,904	1/1:3,15:18:39.06:376,39,0	1/1:2,11:13:29.93:290,30,0	1/1:1,20:21:57.09:550,57,0	1/1:2,17:19:39.06:377,39,0	0/0:28,0:28:66.17:0,66,767	0/0:36,0:36:99:0,99,1171	0/0:15,0:15:45.14:0,45,541
chr10	92401808	.	C	CG	5406.57	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-5.125;DP=622;FS=2.660;HRun=6;HaplotypeScore=145.9664;InbreedingCoeff=0.9869;MQ=71.71;MQ0=12;MQRankSum=3.241;QD=25.62;ReadPosRankSum=0.631;VQSLOD=2.9085;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:75.12:0,75,754	0/0:5,0:5:9.90:0,10,93	0/0:41,0:28:54.53:0,55,613	0/0:36,0:19:38.68:0,39,336	0/0:11,0:11:17.36:0,17,182	0/0:24,0:24:59.69:0,60,609	0/0:16,0:16:32.09:0,32,304	1/1:14,9:22:35.96:387,36,0	0/0:24,0:23:51.10:0,51,512	1/1:11,16:27:54.17:674,54,0	1/1:0,11:10:21.07:264,21,0	1/1:5,18:21:54.14:641,54,0	1/1:8,14:22:54.11:635,54,0	1/1:7,18:24:60.17:727,60,0	0/0:35,0:35:81.17:0,81,823	0/0:24,0:24:63.13:0,63,638	0/0:17,0:16:39.08:0,39,396	1/1:2,11:13:33.11:415,33,0	0/0:18,0:18:42.06:0,42,423	0/0:19,0:19:29.89:0,30,288	0/0:28,0:28:59.85:0,60,603	1/1:6,16:22:42.60:516,43,0	1/1:6,9:14:24.08:302,24,0	1/1:5,13:18:24.28:508,24,0	1/1:2,10:12:27.09:339,27,0	0/0:18,1:19:13.36:0,13,444	0/0:37,0:36:75.11:0,75,749	0/0:15,0:15:39.08:0,39,396
chr10	92401818	.	GGAGAGAGAGA	G	6443.16	PASS	AB=0.768;AC=29;AF=0.537;AN=54;BaseQRankSum=4.089;DP=620;FS=1.186;HRun=0;HaplotypeScore=217.9970;InbreedingCoeff=0.6782;MQ=66.09;MQ0=21;MQRankSum=-6.984;QD=18.25;ReadPosRankSum=2.753;VQSLOD=3.7594;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:36:12.04:279,12,0	1/1:3,0:9:10.86:214,11,0	./.	0/0:33,0:16:3.48:0,3,38	1/1:6,9:15:5.93:40,6,0	1/1:15,0:26:24.08:543,24,0	0/1:6,0:14:55.40:270,0,55	0/1:23,0:21:68.40:68,0,86	1/1:12,11:22:18.06:519,18,0	0/0:26,0:27:51.80:0,52,1150	0/0:11,0:13:15.01:0,15,313	0/0:22,0:24:33.11:0,33,907	0/0:14,0:18:30.10:0,30,892	0/0:18,0:24:42.99:0,43,1039	1/1:20,0:33:27.09:537,27,0	1/1:11,0:24:35.91:739,36,0	1/1:11,0:20:12.04:280,12,0	0/0:11,0:17:33.11:0,33,857	1/1:10,4:14:12.04:333,12,0	1/1:9,3:12:9.03:253,9,0	1/1:20,10:29:2.63:14,3,0	0/0:16,0:18:21.07:0,21,517	0/0:15,0:14:15.05:0,15,482	0/0:16,0:22:33.11:0,33,895	0/0:10,0:11:18.04:0,18,528	0/1:9,8:21:15.85:656,0,16	1/1:10,18:30:45.15:1268,45,0	1/1:9,8:17:15.05:429,15,0
chr10	92401827	.	GA	G	260.14	PASS	AB=0.967;AC=10;AF=0.179;AN=56;BaseQRankSum=11.544;DP=596;FS=5.298;HRun=1;HaplotypeScore=139.7004;InbreedingCoeff=-0.1281;MQ=54.75;MQ0=35;MQRankSum=-9.980;QD=1.45;ReadPosRankSum=5.258;VQSLOD=-0.6834;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:24.49:0,24,390	0/1:9,0:8:1.06:1,0,1	0/0:30,0:15:42.13:0,42,527	0/0:34,0:14:29.94:0,30,312	0/1:13,0:13:7.93:8,0,102	0/1:23,0:21:10.87:11,0,209	0/1:13,0:13:0.83:1,0,181	0/1:19,10:25:99:155,0,515	0/0:26,0:22:5.10:0,5,298	0/0:29,0:28:66.59:0,67,578	0/0:15,0:14:26.91:0,27,258	0/0:24,0:22:51.88:0,52,459	0/0:18,0:18:40.26:0,40,396	0/0:26,0:25:59.67:0,60,541	0/0:29,0:29:34.97:0,35,496	0/1:22,0:22:2.95:3,0,246	0/0:21,0:19:9.22:0,9,170	0/0:17,0:17:36.39:0,36,349	0/1:10,0:10:31.54:32,0,201	0/1:12,1:11:18.08:18,0,205	0/0:28,1:26:38.96:0,39,481	0/0:16,0:15:28.27:0,28,289	0/0:19,0:18:42.34:0,42,465	0/0:19,0:19:33.38:0,33,244	0/0:13,0:11:18.88:0,19,193	0/1:18,0:18:80.51:81,0,248	0/1:30,0:28:78.72:79,0,254	0/0:20,0:17:11.22:0,11,288
chr10	92402430	.	CTG	C	10457.54	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.974;DP=662;FS=2.992;HRun=0;HaplotypeScore=85.2395;InbreedingCoeff=0.9999;MQ=65.76;MQ0=2;MQRankSum=-0.285;QD=44.50;ReadPosRankSum=2.915;VQSLOD=6.4464;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,111,2177	0/0:13,0:13:39.13:0,39,792	0/0:24,0:24:63.16:0,63,1171	0/0:14,0:13:35.81:0,36,665	0/0:18,0:18:51.04:0,51,1026	0/0:25,0:25:75.26:0,75,1519	0/0:25,0:25:75.26:0,75,1500	1/1:1,35:36:99:1694,105,0	0/0:26,0:26:78.23:0,78,1467	1/1:0,28:28:84.29:1370,84,0	1/1:0,10:10:30.10:487,30,0	1/1:0,18:18:51.17:823,51,0	1/1:1,23:22:63.18:1000,63,0	1/1:0,16:16:36.08:586,36,0	0/0:31,0:31:87.28:0,87,1707	0/0:26,0:26:78.25:0,78,1542	0/0:31,0:31:79.05:0,79,1732	1/1:0,31:31:84.29:1370,84,0	0/0:28,0:28:84.26:0,84,1607	0/0:26,0:26:78.26:0,78,1494	0/0:24,0:24:69.24:0,69,1400	1/1:0,21:21:54.18:875,54,0	1/1:0,18:18:51.17:832,51,0	1/1:0,18:18:48.16:783,48,0	1/1:0,15:15:39.13:636,39,0	0/0:23,0:23:69.23:0,69,1355	0/0:32,0:32:96.33:0,96,1950	0/0:20,0:20:60.21:0,60,1214
chr10	92403374	.	T	TA	4586.32	PASS	AB=0.800;AC=27;AF=0.482;AN=56;BaseQRankSum=-4.340;DP=609;FS=6.636;HRun=11;HaplotypeScore=66.1870;InbreedingCoeff=0.8159;MQ=77.15;MQ0=1;MQRankSum=-0.824;QD=15.55;ReadPosRankSum=0.874;VQSLOD=5.4046;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,1:45:97.83:0,98,922	1/1:12,0:12:13.76:138,14,0	0/0:22,0:17:4.92:0,5,83	0/1:15,1:16:3.59:4,0,109	0/0:26,0:28:73.37:0,73,540	0/0:18,0:18:47.81:0,48,371	0/0:21,0:21:37.88:0,38,356	0/0:29,0:31:69.74:0,70,519	0/0:17,0:18:40.84:0,41,305	1/1:7,13:20:35.86:348,36,0	1/1:3,17:21:44.19:467,44,0	1/1:3,12:15:9.83:281,10,0	1/1:4,19:23:51.02:504,51,0	1/1:1,23:24:63.13:639,63,0	1/1:18,0:18:34.80:186,35,0	0/0:22,0:22:50.77:0,51,391	1/1:24,0:24:40.61:217,41,0	1/1:3,12:15:27.05:274,27,0	0/0:22,0:22:56.74:0,57,437	0/1:21,2:23:1.20:1,0,346	0/0:20,0:19:46.91:0,47,364	0/1:5,12:17:7.22:283,0,7	1/1:2,18:19:42.03:414,42,0	1/1:3,15:18:24.15:296,24,0	1/1:3,25:28:16.65:532,17,0	0/0:31,0:31:77.63:0,78,602	0/0:32,0:32:83.65:0,84,647	0/0:4,0:4:11.95:0,12,93
chr10	92403385	.	A	AAT	1836.74	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=-6.048;DP=605;FS=1.144;HRun=0;HaplotypeScore=85.0119;InbreedingCoeff=0.5252;MQ=69.42;MQ0=3;MQRankSum=0.571;QD=13.71;ReadPosRankSum=-2.430;VQSLOD=2.7140;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,143,1727	1/1:0,13:14:14.89:516,15,0	0/1:24,0:15:3.01:3,0,183	0/1:12,0:10:28.70:29,0,149	0/0:27,0:27:77.79:0,78,951	0/0:21,0:21:63.10:0,63,767	0/0:21,0:21:41.23:0,41,651	0/0:34,0:32:90.15:0,90,1081	0/0:16,0:16:48.11:0,48,602	0/1:15,0:15:38.29:38,0,75	0/1:23,0:23:14.30:14,0,119	0/0:14,0:14:21.16:0,21,94	0/0:21,0:21:18.27:0,18,92	0/0:23,0:23:37.81:0,38,109	1/1:0,21:22:36.12:645,36,0	0/0:18,0:18:54.13:0,54,698	1/1:0,22:23:42.14:749,42,0	0/0:19,0:19:34.30:0,34,188	0/0:23,0:23:66.13:0,66,813	0/0:24,0:24:69.67:0,70,780	0/0:19,0:18:50.22:0,50,634	0/0:15,0:15:26.68:0,27,180	0/0:19,0:18:10.96:0,11,73	0/0:16,0:16:20.54:0,21,60	0/0:29,0:29:50.21:0,50,264	0/0:32,0:32:96.26:0,96,1217	0/0:28,0:28:84.24:0,84,1115	0/0:4,0:4:12.04:0,12,163
chr10	92403805	.	GTATTTATTTATT	G	814.51	PASS	AB=0.676;AC=13;AF=0.342;AN=38;BaseQRankSum=0.742;DP=251;FS=0.000;HRun=0;HaplotypeScore=88.9603;InbreedingCoeff=0.4917;MQ=69.87;MQ0=1;MQRankSum=-4.315;QD=13.14;ReadPosRankSum=-1.067;VQSLOD=1.7610;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:12:4.66:12,5,0	0/0:1,0:1:0:0,0,0	./.	./.	0/0:6,0:6:2.99:0,3,24	0/0:6,0:6:9.03:0,9,477	0/0:7,0:7:12.04:0,12,510	0/0:25,0:24:9.03:0,9,178	0/0:8,0:11:6.02:0,6,153	./.	1/1:3,2:5:5.98:122,6,0	1/1:3,4:7:6.02:205,6,0	1/1:4,1:5:3.01:103,3,0	1/1:3,2:5:3.01:103,3,0	./.	0/0:9,0:9:6.02:0,6,266	0/0:21,0:21:18.02:0,18,267	0/1:13,12:25:36.56:295,0,37	0/0:16,0:19:15.03:0,15,349	./.	./.	./.	./.	./.	1/1:2,1:3:3.01:102,3,0	0/0:4,0:7:9.03:0,9,231	0/0:7,0:7:9.03:0,9,250	0/0:13,0:17:6.02:0,6,170
chr10	92403806	.	TA	T	368.39	PASS	AB=0.944;AC=8;AF=0.143;AN=56;BaseQRankSum=6.652;DP=246;FS=0.000;HRun=1;HaplotypeScore=36.7019;InbreedingCoeff=0.5290;MQ=70.06;MQ0=1;MQRankSum=-0.210;QD=9.96;ReadPosRankSum=1.425;VQSLOD=1.2649;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:16.82:0,17,344	1/1:1,0:1:2.92:17,3,0	0/0:13,0:10:30.05:0,30,378	0/1:7,1:8:19.46:19,0,157	0/0:6,0:6:18.03:0,18,237	0/0:6,0:6:18.05:0,18,262	0/0:7,0:7:21.05:0,21,301	0/0:24,0:23:69.14:0,69,954	0/0:11,0:11:28.50:0,29,365	0/0:2,0:2:6.02:0,6,94	0/0:4,0:4:11.07:0,11,146	0/0:7,0:7:13.10:0,13,152	0/0:5,0:5:14.08:0,14,190	0/0:5,0:5:3.14:0,3,132	1/1:3,1:4:11.63:89,12,0	0/0:8,0:8:24.04:0,24,311	1/1:15,6:21:13.27:371,13,0	0/0:24,1:25:7.10:0,7,448	0/0:19,0:19:51.80:0,52,699	0/0:8,0:8:24.05:0,24,330	0/0:8,0:8:24.06:0,24,351	0/0:2,0:2:6.02:0,6,93	0/0:5,0:5:15.04:0,15,212	0/0:2,0:2:6.02:0,6,91	0/1:3,0:3:0.97:1,0,85	0/0:7,0:7:16.97:0,17,201	0/0:6,0:6:14.73:0,15,174	0/0:17,0:17:41.35:0,41,614
chr10	92403809	.	T	TG	745.53	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=5.699;DP=222;FS=7.850;HRun=0;HaplotypeScore=33.0457;InbreedingCoeff=0.4910;MQ=65.94;MQ0=1;MQRankSum=0.104;QD=18.18;ReadPosRankSum=1.364;VQSLOD=5.2711;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:21.72:0,22,299	1/1:0,1:1:3.01:48,3,0	0/0:10,0:7:21.07:0,21,283	0/1:6,0:6:30.49:30,0,111	0/0:4,0:4:12.04:0,12,168	0/0:6,0:6:18.05:0,18,237	0/0:6,0:6:18.05:0,18,231	0/0:21,0:20:59.67:0,60,769	0/0:10,0:10:26.82:0,27,323	0/0:2,0:2:6.02:0,6,84	0/0:4,0:4:11.93:0,12,141	0/0:7,0:7:14.84:0,15,157	0/0:5,0:5:14.93:0,15,166	0/0:5,0:5:11.91:0,12,140	1/1:1,3:4:12.04:180,12,0	0/0:6,0:6:18.06:0,18,251	1/1:1,11:18:19.55:617,20,0	0/0:23,0:24:14.82:0,15,394	0/0:18,0:18:49.43:0,49,595	0/0:6,0:6:18.06:0,18,252	0/0:7,0:7:21.07:0,21,293	0/0:2,0:2:6.02:0,6,84	0/0:4,0:4:12.04:0,12,168	0/0:3,0:3:6.48:0,6,68	0/0:3,0:3:8.52:0,9,93	0/1:6,0:6:4.27:4,0,157	0/1:6,0:6:1.92:2,0,172	0/0:17,0:17:42.01:0,42,560
chr10	92403923	.	A	AT	908.11	PASS	AB=0.824;AC=21;AF=0.375;AN=56;BaseQRankSum=-3.859;DP=308;FS=0.701;HRun=14;HaplotypeScore=38.9891;InbreedingCoeff=0.5738;MQ=75.09;MQ0=11;MQRankSum=0.436;QD=8.11;ReadPosRankSum=-1.243;VQSLOD=1.4822;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:8:13.81:0,14,49	0/0:0,0:1:2.04:0,2,6	0/0:27,0:15:11.73:0,12,63	0/0:12,0:6:2.55:0,3,29	0/0:18,0:18:20.47:0,20,188	0/0:4,0:11:15.60:0,16,58	0/0:6,0:11:11.75:0,12,34	0/1:13,2:15:14.10:124,0,14	0/0:5,0:4:5.82:0,6,38	1/1:6,4:10:9.36:83,9,0	1/1:6,3:8:12.46:103,12,0	1/1:4,5:10:15.87:130,16,0	1/1:2,4:5:5.94:44,6,0	1/1:0,6:6:9:79,9,0	0/0:0,0:9:5.98:0,6,17	0/0:1,0:8:10.17:0,10,29	0/0:2,0:22:26.47:0,26,76	1/1:5,15:20:0.48:252,0,0	0/0:10,0:10:8.62:0,9,45	0/0:8,0:8:12.26:0,12,78	0/0:15,0:14:27.34:0,27,159	1/1:3,1:4:9.44:74,9,0	1/1:0,4:4:6:53,6,0	0/1:4,3:6:17.82:69,0,18	1/1:0,6:6:9:79,9,0	0/1:12,1:13:2.99:3,0,108	0/0:15,1:16:14.96:0,15,218	0/0:7,3:9:15.23:0,15,111
chr10	92404022	.	AT	A	236.05	PASS	AB=0.836;AC=4;AF=0.071;AN=56;BaseQRankSum=4.739;DP=362;FS=10.881;HRun=12;HaplotypeScore=32.6602;InbreedingCoeff=0.3066;MQ=55.45;MQ0=37;MQRankSum=-1.100;QD=4.07;ReadPosRankSum=-1.479;VQSLOD=-0.4218;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:17:42.08:0,42,426	0/0:4,0:2:6.01:0,6,61	0/0:5,0:3:9.01:0,9,88	0/0:5,0:5:5.93:0,6,48	0/0:10,0:8:18.03:0,18,178	0/0:17,0:15:39.08:0,39,396	0/0:16,1:14:12.79:0,13,301	1/1:12,15:23:38.81:301,39,0	0/0:9,0:9:21.04:0,21,213	0/0:8,0:7:12.02:0,12,122	0/0:7,0:5:9.02:0,9,91	0/0:11,1:10:6.77:0,7,234	0/0:14,0:15:35.90:0,36,344	0/0:17,0:16:33.06:0,33,331	0/0:12,0:11:21.04:0,21,213	0/0:15,0:15:42.07:0,42,420	0/0:30,3:29:5.40:0,5,583	0/1:21,5:23:35.87:36,0,389	0/0:22,0:18:34.90:0,35,362	0/0:7,0:6:15.03:0,15,152	0/0:12,0:12:30.06:0,30,301	0/0:4,0:4:9.02:0,9,91	0/0:4,0:3:8.98:0,9,80	0/0:12,0:11:30.06:0,30,305	0/1:3,1:4:11.38:11,0,63	0/0:12,0:12:27.05:0,27,274	0/0:14,0:12:24.52:0,25,244	0/0:10,0:9:26.79:0,27,256
chr10	92404385	.	CA	C	1838.17	PASS	AB=0.694;AC=42;AF=0.913;AN=46;BaseQRankSum=-4.929;DP=88;FS=3.099;HRun=2;HaplotypeScore=17.0226;InbreedingCoeff=0.2203;MQ=106.87;MQ0=1;MQRankSum=-3.644;QD=24.51;ReadPosRankSum=2.460;VQSLOD=3.3430;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:9.03:116,9,0	./.	0/1:7,1:7:11.69:12,0,130	0/0:13,0:11:18.60:0,19,230	1/1:0,1:1:3.01:39,3,0	1/1:0,1:1:3.01:39,3,0	1/1:0,10:10:18.06:233,18,0	./.	1/1:0,1:1:3.01:39,3,0	1/1:0,3:3:9.02:103,9,0	./.	1/1:0,3:3:9.03:116,9,0	1/1:2,2:4:6.02:77,6,0	1/1:0,2:2:3.01:39,3,0	1/1:0,1:1:3.01:39,3,0	1/1:0,2:2:6.02:78,6,0	1/1:0,2:2:6.02:77,6,0	1/1:0,3:3:6.02:78,6,0	1/1:0,3:3:9.01:101,9,0	1/1:0,1:1:3.01:39,3,0	1/1:1,9:10:21.06:257,21,0	1/1:0,2:2:6.02:78,6,0	0/1:0,2:2:0:0,0,0	1/1:0,5:5:12.04:155,12,0	1/1:0,2:2:6.02:78,6,0	1/1:0,4:4:12.04:155,12,0	./.	./.
chr10	92404920	.	A	ATACGG	33360.58	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.546;DP=501;FS=5.642;HRun=0;HaplotypeScore=98.3397;InbreedingCoeff=0.9334;MQ=73.63;MQ0=0;MQRankSum=-8.216;QD=70.38;ReadPosRankSum=5.013;VQSLOD=6.2020;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:24:51.12:1613,51,0	1/1:0,4:6:12.04:347,12,0	0/0:10,0:10:30.04:0,30,578	0/0:17,0:17:42.10:0,42,732	1/1:3,0:14:27.09:729,27,0	1/1:1,9:13:23.77:630,24,0	1/1:4,22:30:72.20:2289,72,0	1/1:6,3:9:24.08:721,24,0	1/1:2,0:16:42.14:1080,42,0	1/1:1,9:12:33.11:1014,33,0	1/1:1,3:6:9.03:296,9,0	1/1:2,11:15:36.08:1115,36,0	1/1:3,13:17:45.15:1490,45,0	1/1:3,16:22:45.15:1493,45,0	1/1:2,14:16:45.15:1493,45,0	1/1:0,9:9:27.09:894,27,0	1/1:4,35:43:96.33:3169,96,0	1/1:1,28:30:81.19:2519,81,0	1/1:6,0:12:27.09:655,27,0	1/1:2,0:9:21.07:551,21,0	1/1:6,0:59:99:3550,138,0	1/1:0,5:6:15.05:498,15,0	1/1:2,5:7:15.05:498,15,0	1/1:2,28:33:57.14:1812,57,0	1/1:0,17:19:48.16:1594,48,0	1/1:1,0:20:57.18:1409,57,0	1/1:1,0:18:54.19:1359,54,0	1/1:2,0:9:21.07:544,21,0
chr10	92405393	.	T	TC	1487.78	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-7.966;DP=662;FS=5.113;HRun=8;HaplotypeScore=69.8391;InbreedingCoeff=0.8888;MQ=77.94;MQ0=0;MQRankSum=0.727;QD=16.53;ReadPosRankSum=2.231;VQSLOD=3.8147;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:58.23:0,58,516	1/1:2,7:9:15.04:173,15,0	0/0:27,0:23:25.89:0,26,221	0/1:26,0:23:1.72:2,0,68	0/0:26,0:26:61.64:0,62,554	0/0:33,0:32:81.01:0,81,736	0/0:28,0:28:72:0,72,648	0/0:33,0:33:71.88:0,72,622	0/0:29,0:29:78.03:0,78,714	0/0:23,0:23:66.02:0,66,600	0/0:18,0:18:36:0,36,324	0/0:17,0:17:48.01:0,48,435	0/0:16,0:16:20.17:0,20,333	0/0:30,0:30:80.31:0,80,694	1/1:2,31:33:81.24:935,81,0	0/0:25,0:25:71.94:0,72,634	1/1:2,20:22:45.13:519,45,0	0/0:28,0:28:84.04:0,84,766	0/0:15,0:15:42:0,42,378	0/0:26,0:26:62.97:0,63,567	0/0:14,0:14:29.96:0,30,262	0/0:31,0:31:84.02:0,84,760	0/0:18,0:18:48.01:0,48,436	0/0:16,0:16:39.01:0,39,357	0/0:24,0:24:68.94:0,69,619	0/0:32,0:32:87.02:0,87,787	0/0:29,0:29:84.04:0,84,765	0/0:8,0:8:23.94:0,24,209
chr10	92407814	.	TTCCCCAAGGTGCCACG	T	18362.50	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=17.221;DP=675;FS=24.636;HRun=0;HaplotypeScore=326.6761;InbreedingCoeff=0.9887;MQ=79.44;MQ0=0;MQRankSum=-15.620;QD=85.41;ReadPosRankSum=3.508;VQSLOD=3.5209;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,7403	0/0:13,0:13:39.11:0,39,2860	0/0:23,0:23:66.18:0,66,3256	0/0:15,0:15:31.71:0,32,2288	0/0:14,0:14:42.14:0,42,3126	0/0:18,0:18:51.18:0,51,3928	0/0:38,0:38:99:0,111,8231	1/1:6,10:16:27.07:953,27,0	0/0:32,0:32:93.32:0,93,6886	1/1:5,20:25:60.16:2350,60,0	1/1:4,11:15:30.06:1231,30,0	1/1:3,22:25:60.21:2839,60,0	1/1:4,19:23:54.19:2556,54,0	1/1:5,18:23:48.16:2272,48,0	0/0:41,0:41:99:0,120,8467	0/0:22,0:22:66.23:0,66,4784	0/0:40,0:40:99:0,117,9099	1/1:1,20:21:48.16:2206,48,0	0/0:33,0:33:96.33:0,96,6844	0/0:16,0:16:42.14:0,42,2747	0/0:49,0:49:99:0,144,10372	1/1:3,18:21:33.11:1562,33,0	1/1:1,6:7:8.47:424,8,0	1/1:10,19:29:26.25:1120,26,0	1/1:2,8:10:18.06:850,18,0	0/0:32,0:32:96.33:0,96,7135	0/0:28,0:28:81.21:0,81,5859	0/0:9,0:9:24.08:0,24,1765
chr10	92408360	.	T	TGG	1371.21	PASS	AB=0.672;AC=19;AF=0.339;AN=56;BaseQRankSum=0.868;DP=556;FS=3.483;HRun=10;HaplotypeScore=91.6876;InbreedingCoeff=0.5619;MQ=81.28;MQ0=1;MQRankSum=-1.926;QD=6.15;ReadPosRankSum=-0.964;VQSLOD=-0.0290;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:15,12:32:25.16:234,0,25	0/0:9,0:9:20.89:0,21,213	0/0:33,0:27:20.86:0,21,338	0/0:32,0:25:36.34:0,36,283	0/1:8,0:16:19.40:19,0,44	1/1:6,12:23:17.03:196,17,0	1/1:8,17:29:50.61:683,51,0	0/0:25,0:26:37.71:0,38,364	0/1:6,0:21:5.05:53,0,5	0/0:24,0:24:42.03:0,42,426	0/0:12,0:14:32.79:0,33,309	0/0:14,0:14:26.87:0,27,257	0/0:14,0:16:35.54:0,36,329	0/0:15,0:15:36.07:0,36,365	0/0:20,0:20:41.94:0,42,420	1/1:2,7:10:11.53:143,12,0	0/0:36,0:36:93.09:0,93,937	0/0:23,0:24:59.82:0,60,583	0/1:10,0:17:31.13:31,0,140	1/1:2,0:8:7.61:27,8,0	1/1:8,0:21:17.47:61,17,0	0/0:21,0:21:42.08:0,42,427	0/0:11,0:13:13.95:0,14,276	0/0:19,0:19:45.06:0,45,446	0/0:13,0:13:24.02:0,24,243	0/1:12,0:18:10.27:10,0,80	1/1:6,0:20:4.52:82,5,0	1/1:5,0:8:6.24:21,6,0
chr10	92408857	.	C	CT	2415.10	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.169;DP=693;FS=6.967;HRun=2;HaplotypeScore=63.5497;InbreedingCoeff=0.9970;MQ=75.89;MQ0=0;MQRankSum=-4.480;QD=37.74;ReadPosRankSum=1.111;VQSLOD=4.2163;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.24:0,75,1023	1/1:0,9:9:18.06:288,18,0	0/0:15,0:15:42.13:0,42,569	0/0:13,0:13:33.08:0,33,438	0/0:32,0:32:90.25:0,90,1234	0/0:36,0:36:99:0,108,1504	0/0:17,0:17:51.17:0,51,713	0/0:36,0:36:99:0,102,1426	0/0:27,0:27:81.26:0,81,1116	0/0:34,0:34:99:0,102,1412	0/0:18,0:18:54.12:0,54,701	0/0:29,0:29:84.28:0,84,1174	0/0:22,0:22:66.21:0,66,902	0/0:18,0:18:54.18:0,54,754	1/1:1,36:37:99:1646,105,0	0/0:35,0:35:99:0,105,1418	1/1:1,17:18:39.13:623,39,0	0/0:17,0:17:48.16:0,48,670	0/0:17,0:17:48.16:0,48,671	0/0:26,0:26:78.25:0,78,1065	0/0:21,0:21:60.20:0,60,838	0/0:30,0:30:89.88:0,90,1210	0/0:26,0:26:78.24:0,78,1057	0/0:21,0:21:60.20:0,60,838	0/0:26,0:26:78.26:0,78,1090	0/0:31,0:31:93.30:0,93,1279	0/0:41,0:39:99:0,117,1612	0/0:16,0:16:45.15:0,45,629
chr10	92410512	.	TAA	T	3777.22	PASS	AB=0.926;AC=17;AF=0.304;AN=56;BaseQRankSum=-14.354;DP=692;FS=9.815;HRun=14;HaplotypeScore=164.0163;InbreedingCoeff=0.8509;MQ=57.44;MQ0=6;MQRankSum=9.974;QD=15.23;ReadPosRankSum=-2.101;VQSLOD=0.4014;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:35.30:0,35,317	0/0:3,0:9:11.67:0,12,138	0/0:22,0:16:4.76:0,5,116	0/0:17,0:11:7.86:0,8,106	1/1:5,25:30:51.49:574,51,0	0/0:27,0:27:44.03:0,44,342	0/0:18,0:18:41.95:0,42,346	0/0:38,0:37:29.90:0,30,284	1/1:4,18:22:42.02:388,42,0	0/0:32,0:32:52.69:0,53,443	0/0:29,0:29:37.36:0,37,452	0/0:17,0:17:14.98:0,15,126	0/0:22,0:22:29.97:0,30,252	0/0:17,0:16:23.01:0,23,239	0/0:6,0:24:39.08:0,39,408	0/1:23,1:25:19.31:19,0,245	0/0:8,0:32:50.86:0,51,491	0/0:19,0:19:8.99:0,9,77	1/1:14,19:34:24.91:424,25,0	1/1:3,19:25:38.24:434,38,0	1/1:5,18:26:46.50:390,47,0	0/0:30,0:30:33.93:0,34,373	0/0:16,0:16:19.32:0,19,196	0/0:14,0:14:5.99:0,6,50	0/0:27,0:27:41.96:0,42,351	1/1:7,16:24:51.02:433,51,0	1/1:8,27:35:45.28:587,45,0	1/1:0,25:25:57.07:527,57,0
chr10	92410520	.	A	AACAAAAAAC	17984.31	PASS	AB=0.542;AC=27;AF=0.482;AN=56;BaseQRankSum=-7.896;DP=741;FS=6.862;HRun=0;HaplotypeScore=197.8651;InbreedingCoeff=0.7763;MQ=57.59;MQ0=8;MQRankSum=-9.915;QD=43.65;ReadPosRankSum=3.753;VQSLOD=3.7040;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:37:37.82:467,0,38	0/0:9,0:9:10.54:0,11,175	0/0:20,0:10:23.50:0,23,228	0/0:19,0:10:17.15:0,17,220	0/0:33,0:32:92.37:0,92,1440	1/1:2,0:26:21.37:443,21,0	1/1:1,0:20:45.10:509,45,0	1/1:4,0:37:95.33:1405,95,0	0/0:20,0:20:48.15:0,48,1045	1/1:0,23:35:94.97:2877,95,0	1/1:0,23:31:75.02:2685,75,0	1/1:0,15:21:15.05:688,15,0	1/1:1,14:29:29.85:1371,30,0	1/1:3,14:22:33.07:1365,33,0	0/0:24,0:24:15.55:0,16,564	0/1:3,0:31:62.07:342,0,62	0/0:30,0:29:53.61:0,54,737	0/1:2,15:24:4.93:423,0,5	0/0:30,0:29:69.48:0,69,1154	0/0:29,0:29:86.95:0,87,1438	0/0:26,0:26:66.06:0,66,1220	1/1:2,24:35:41.39:2089,41,0	1/1:1,10:15:27.07:1119,27,0	1/1:0,12:16:6.02:275,6,0	1/1:0,24:31:42.62:1927,43,0	0/0:24,0:24:53.07:0,53,901	0/0:34,0:34:86.33:0,86,1718	0/0:31,0:31:72.16:0,72,1449
chr10	92411793	.	C	CTTTTTTTT	11480.52	PASS	AB=1.000;AC=54;AF=0.964;AN=56;BaseQRankSum=1.823;DP=568;FS=0.000;HRun=13;HaplotypeScore=177.8637;InbreedingCoeff=0.3394;MQ=58.00;MQ0=5;MQRankSum=-6.132;QD=20.21;ReadPosRankSum=0.693;VQSLOD=1.5288;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:44,0:45:70.18:442,70,0	1/1:4,0:7:6.72:85,7,0	0/1:17,0:12:4.36:4,0,6	0/1:14,0:10:2.11:2,0,91	1/1:35,0:36:73.10:965,73,0	1/1:22,0:21:41.15:316,41,0	1/1:30,0:30:52.17:345,52,0	1/1:38,0:38:9.11:425,9,0	1/1:12,0:12:26.76:515,27,0	1/1:22,0:21:29.78:380,30,0	1/1:11,0:12:24.08:326,24,0	1/1:12,0:13:24.08:347,24,0	1/1:13,0:14:16.78:178,17,0	1/1:13,0:14:17.03:282,17,0	1/1:19,0:18:24.07:289,24,0	1/1:20,0:20:21.19:163,21,0	1/1:19,0:19:32.89:412,33,0	1/1:11,0:10:16.41:118,16,0	1/1:29,0:27:60.03:1119,60,0	1/1:32,0:31:59.81:1042,60,0	1/1:11,0:10:9.78:62,10,0	1/1:16,0:15:29.40:526,29,0	1/1:12,0:13:6.19:221,6,0	1/1:5,0:6:9.50:135,9,0	1/1:18,0:19:21.48:491,21,0	1/1:8,19:30:59.65:724,60,0	1/1:21,0:20:44.21:793,44,0	1/1:22,0:22:47.72:773,48,0
chr10	92411801	.	T	TTTTC	10328.15	PASS	AB=0.694;AC=31;AF=0.554;AN=56;BaseQRankSum=-0.443;DP=574;FS=0.000;HRun=0;HaplotypeScore=99.9249;InbreedingCoeff=0.3629;MQ=53.61;MQ0=7;MQRankSum=0.459;QD=25.50;ReadPosRankSum=8.637;VQSLOD=3.8699;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,38:42:75.14:1676,75,0	1/1:6,0:8:3.18:145,3,0	0/0:13,0:7:8.71:0,9,81	0/0:11,0:6:5.62:0,6,102	0/0:34,0:33:20.75:0,21,274	1/1:0,22:23:42.14:951,42,0	1/1:2,23:26:48.43:1183,48,0	0/1:7,0:41:89.35:764,0,89	0/0:14,0:14:29.69:0,30,208	1/1:4,0:26:14.82:582,15,0	1/1:1,0:18:24.05:427,24,0	1/1:3,0:18:24.05:405,24,0	0/1:2,0:13:1.14:195,0,1	0/1:6,2:15:1.82:440,0,2	0/1:3,0:18:15.47:347,0,15	1/1:5,13:20:1.59:494,2,0	1/1:3,1:20:33.08:600,33,0	1/1:5,2:11:18.03:345,18,0	0/0:24,0:22:7.02:0,7,290	0/0:30,0:29:61.82:0,62,403	0/1:6,0:5:6.88:28,0,7	1/1:1,2:22:12.98:679,13,0	0/1:4,1:15:64.27:295,0,64	0/1:6,0:6:4:155,0,4	0/1:3,0:21:3.28:591,0,3	0/1:26,0:25:25.18:25,0,186	0/0:18,0:17:42.30:0,42,285	0/0:25,0:24:52.51:0,53,348
chr10	92411982	.	C	CTCTCTCTCTCTGTT	4812.83	PASS	AB=0.965;AC=25;AF=0.446;AN=56;BaseQRankSum=6.343;DP=707;FS=18.010;HRun=0;HaplotypeScore=287.8794;InbreedingCoeff=0.1327;MQ=57.46;MQ0=32;MQRankSum=-4.615;QD=10.84;ReadPosRankSum=-0.828;VQSLOD=1.3998;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,18:35:39:149,0,39	1/1:7,0:7:4.73:47,5,0	0/0:30,0:13:12.04:0,12,194	0/0:44,0:20:14.60:0,15,213	0/0:20,0:20:18.05:0,18,328	1/1:26,0:23:52:925,52,0	0/1:31,0:29:31.04:31,0,36	0/1:43,0:42:99:510,0,336	0/0:26,0:25:51.02:0,51,1382	0/1:30,0:27:58.32:402,0,58	0/1:15,0:15:28.20:28,0,49	0/1:23,0:22:90.54:235,0,91	0/1:24,0:24:99:277,0,147	1/1:17,0:17:9.44:35,9,0	1/1:38,0:37:1.87:683,2,0	0/1:26,0:25:36.24:335,0,36	1/1:20,0:18:37.26:588,37,0	0/1:19,0:18:99:211,0,109	0/0:20,0:16:36.11:0,36,559	0/0:18,0:16:18.06:0,18,316	0/0:39,0:39:78.64:0,79,1360	0/1:23,0:21:13.78:14,0,82	1/1:20,0:20:14.15:147,14,0	0/1:28,0:27:59.14:86,0,59	1/1:16,0:16:19.65:110,20,0	0/0:30,0:26:70.93:0,71,1374	0/0:22,0:20:40.11:0,40,982	0/0:14,0:11:12.04:0,12,172
chr10	92411988	.	C	CTGTT	4642.90	PASS	AB=0.949;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.826;DP=708;FS=18.369;HRun=0;HaplotypeScore=166.1302;InbreedingCoeff=0.0880;MQ=51.20;MQ0=34;MQRankSum=-2.351;QD=16.23;ReadPosRankSum=1.607;VQSLOD=3.2779;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:34:15.56:0,16,197	0/0:7,0:7:4.89:0,5,146	0/0:27,0:10:18.04:0,18,267	0/0:39,0:15:20.61:0,21,336	0/0:19,0:19:21.04:0,21,301	0/1:29,0:25:18.48:18,0,354	0/0:31,0:28:5.12:0,5,247	0/1:41,0:40:99:582,0,617	0/0:28,0:27:57.19:0,57,940	0/1:8,19:25:57.08:697,0,57	0/1:15,0:15:19.77:265,0,20	0/1:23,0:23:99:325,0,146	0/1:25,0:25:50.17:378,0,50	1/1:18,0:18:36.90:447,37,0	0/0:36,0:35:59.29:0,59,684	0/0:28,0:27:15.61:0,16,276	0/0:18,0:16:29.29:0,29,360	0/1:20,0:19:99:209,0,209	0/0:20,0:14:42.14:0,42,664	0/0:19,0:17:24.53:0,25,342	0/0:40,0:40:89.49:0,89,1378	0/1:23,0:21:70.88:443,0,71	1/1:19,0:19:2.77:585,3,0	0/1:26,0:25:95.73:305,0,96	1/1:18,0:18:7.51:388,8,0	0/0:32,0:28:27.51:0,28,1151	0/0:25,0:23:53.51:0,54,740	0/0:15,0:12:26.87:0,27,339
chr10	92411992	.	C	CTGTT	1912.93	PASS	AB=0.953;AC=14;AF=0.250;AN=56;BaseQRankSum=5.354;DP=676;FS=24.174;HRun=0;HaplotypeScore=168.4006;InbreedingCoeff=0.0080;MQ=47.94;MQ0=34;MQRankSum=-2.689;QD=7.01;ReadPosRankSum=-4.661;VQSLOD=0.1071;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:33:55.39:55,0,198	0/1:7,0:7:38.15:38,0,64	0/0:20,0:4:12.04:0,12,194	0/0:31,0:10:14.88:0,15,213	0/0:18,0:18:18.05:0,18,267	0/1:25,5:26:99:674,0,103	0/0:18,12:28:1.57:0,2,170	0/0:40,0:39:52.11:0,52,801	0/0:29,0:28:57.17:0,57,896	0/1:27,0:24:71.08:71,0,203	0/1:15,0:15:8.26:8,0,53	0/0:23,0:22:2.19:0,2,129	0/0:21,0:21:10.88:0,11,149	1/1:17,0:17:7.23:23,7,0	0/1:32,0:31:79.52:656,0,80	0/1:15,14:28:31.31:31,0,296	1/1:18,0:16:33.87:476,34,0	0/0:19,0:18:28.91:0,29,175	0/0:17,0:11:33.11:0,33,488	0/0:18,0:16:18.94:0,19,273	0/0:39,0:39:89.47:0,89,1325	0/1:23,0:21:5.30:5,0,87	0/1:20,0:20:14.22:25,0,14	0/0:26,0:25:12.95:0,13,76	0/1:18,0:18:5.45:5,0,44	0/0:32,0:28:77.63:0,78,1221	0/0:23,0:21:50.98:0,51,746	0/0:15,0:12:24.08:0,24,317
chr10	92412013	.	TCTCACA	T	2189.50	PASS	AB=0.980;AC=18;AF=0.321;AN=56;BaseQRankSum=-2.652;DP=596;FS=22.088;HRun=0;HaplotypeScore=171.9460;InbreedingCoeff=-0.4119;MQ=45.79;MQ0=32;MQRankSum=4.335;QD=5.63;ReadPosRankSum=-1.621;VQSLOD=1.0845;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:25:14.73:15,0,65	0/1:8,0:8:7.19:125,0,7	0/0:10,0:6:14.41:0,14,188	0/0:17,0:8:14.11:0,14,268	0/0:15,0:15:8.97:0,9,74	0/0:28,0:24:32.23:0,32,489	0/1:21,0:18:26.10:26,0,240	0/0:36,0:34:39.45:0,39,315	0/1:35,0:34:99:542,0,173	0/1:13,0:11:18.90:19,0,128	0/1:19,0:19:70.74:71,0,145	0/1:24,0:23:39.24:39,0,151	0/1:24,0:24:7.62:8,0,120	0/1:19,0:19:16.62:43,0,17	0/1:26,0:25:15.84:167,0,16	0/0:18,0:17:33.11:0,33,585	0/1:15,0:13:0.10:211,0,0	0/0:21,0:20:24.83:0,25,243	0/1:17,0:13:32.38:32,0,93	0/0:17,0:15:3.27:0,3,13	0/1:34,0:33:99:501,0,203	0/0:21,0:20:4.78:0,5,110	0/1:18,0:18:19.07:19,0,107	0/0:24,0:23:13.32:0,13,177	0/1:21,0:21:25.99:26,0,41	0/1:28,0:24:99:278,0,289	0/1:20,0:19:99:192,0,179	0/1:9,8:14:27.35:30,0,27
chr10	92412015	.	TCA	T	2787.40	PASS	AB=0.925;AC=39;AF=0.722;AN=54;BaseQRankSum=2.708;DP=585;FS=2.127;HRun=0;HaplotypeScore=141.1530;InbreedingCoeff=0.3555;MQ=45.71;MQ0=31;MQRankSum=3.408;QD=5.67;ReadPosRankSum=0.257;VQSLOD=3.3998;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:25:2.75:105,0,3	1/1:7,0:7:10.21:84,10,0	0/0:11,0:7:17.76:0,18,125	0/0:18,0:9:14.03:0,14,125	0/1:9,0:14:0:0,0,0	0/0:27,0:23:6.23:0,6,180	0/1:20,0:17:23.54:24,0,96	0/1:27,7:33:5.93:127,0,6	1/1:31,3:34:50.72:394,51,0	1/1:12,0:10:6.12:70,6,0	0/1:17,1:18:25.80:114,0,26	1/1:23,1:23:2.70:169,3,0	0/1:22,1:23:1.52:121,0,2	1/1:16,1:17:14:108,14,0	1/1:26,0:25:13.86:92,14,0	0/0:19,0:18:14.72:0,15,268	1/1:15,0:13:17.81:127,18,0	1/1:20,1:20:25.06:179,25,0	1/1:17,0:13:5.71:43,6,0	./.	1/1:33,0:33:1.82:238,2,0	1/1:19,1:19:16.35:126,16,0	0/1:15,0:15:3.04:65,0,3	1/1:25,0:24:27.97:204,28,0	1/1:19,1:21:20.48:165,20,0	1/1:28,0:24:29.73:214,30,0	1/1:21,0:19:20.88:157,21,0	1/1:16,0:13:2.97:20,3,0
chr10	92414146	.	CT	C	1628.30	PASS	AB=0.732;AC=36;AF=0.643;AN=56;BaseQRankSum=1.203;DP=482;FS=3.285;HRun=15;HaplotypeScore=70.1775;InbreedingCoeff=0.4521;MQ=68.39;MQ0=6;MQRankSum=0.501;QD=4.59;ReadPosRankSum=1.501;VQSLOD=1.8369;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,3:27:23.72:0,24,299	0/0:5,0:5:9:0,9,79	0/0:15,0:9:8.96:0,9,71	0/0:15,0:10:3.87:0,4,12	1/1:9,0:24:25.27:84,25,0	0/1:17,1:18:8.74:9,0,160	0/0:21,2:25:8.96:0,9,285	1/1:11,16:30:42.39:272,42,0	1/1:2,0:14:18.31:53,18,0	1/1:7,13:21:11.04:191,11,0	0/1:8,5:14:22.69:79,0,23	1/1:8,10:18:11.71:77,12,0	0/1:8,7:15:5.72:95,0,6	1/1:8,2:10:2.10:18,2,0	0/0:18,1:22:11.23:0,11,184	0/0:14,0:16:33.20:0,33,263	0/1:14,3:19:9.53:10,0,190	1/1:3,5:8:4.07:64,4,0	1/1:2,1:6:9.06:37,9,0	1/1:2,0:16:20.77:62,21,0	1/1:3,1:10:11.08:43,11,0	0/1:6,9:16:0.77:115,0,1	1/1:3,7:11:13.80:83,14,0	0/1:9,13:23:11.76:160,0,12	1/1:6,15:21:30.78:186,31,0	1/1:10,1:32:32.39:94,32,0	1/1:10,2:19:18.05:73,18,0	1/1:6,0:8:4.04:12,4,0
chr10	92415259	.	ATATATATATATATC	A	801.85	PASS	AC=18;AF=0.818;AN=22;BaseQRankSum=-1.924;DP=60;FS=2.927;HRun=0;HaplotypeScore=42.7939;InbreedingCoeff=0.3580;MQ=47.19;MQ0=4;MQRankSum=1.094;QD=16.36;ReadPosRankSum=-0.264;VQSLOD=1.4450;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:1:2.99:24,3,0	./.	0/0:2,0:1:3:0,3,28	0/0:8,0:2:2.96:0,3,19	./.	./.	./.	1/1:11,0:11:32.94:280,33,0	./.	1/1:1,0:1:2.96:19,3,0	./.	1/1:2,0:2:3:25,3,0	1/1:2,0:2:5.94:43,6,0	./.	1/1:1,0:1:3:25,3,0	./.	1/1:4,15:18:7.38:181,7,0	1/1:9,0:8:23.78:249,24,0	./.	./.	./.	./.	./.	./.	1/1:3,0:3:5.98:47,6,0	./.	./.	./.
chr10	92415553	.	C	CAAAACAAAA	8607.20	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-9.405;DP=608;FS=8.913;HRun=0;HaplotypeScore=168.0965;InbreedingCoeff=0.4585;MQ=54.22;MQ0=9;MQRankSum=1.483;QD=25.54;ReadPosRankSum=1.753;VQSLOD=3.9179;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:37:99:563,0,197	0/1:5,0:5:14.64:48,0,15	0/0:17,0:11:20.31:0,20,287	0/0:31,0:14:17.78:0,18,276	1/1:3,15:19:30.02:1012,30,0	0/1:23,0:23:13.19:246,0,13	0/1:25,0:25:19.66:20,0,38	0/0:39,0:39:71.94:0,72,832	1/1:4,21:27:18.05:734,18,0	0/0:18,0:18:38.82:0,39,677	0/0:8,0:8:15.31:0,15,137	0/0:32,0:32:56.38:0,56,1041	0/0:18,0:18:24.08:0,24,478	0/0:21,0:21:41.21:0,41,676	0/1:25,0:25:87.39:87,0,150	0/1:24,0:24:80.83:573,0,81	0/1:23,0:22:64.31:64,0,81	0/0:13,0:13:6.02:0,6,122	1/1:3,17:26:69.15:1406,69,0	1/1:2,7:10:15.05:520,15,0	1/1:7,19:28:11.95:295,12,0	0/0:10,0:10:20.55:0,21,335	0/0:14,0:14:11.77:0,12,151	0/0:31,0:31:34.30:0,34,505	0/0:17,0:17:28.71:0,29,423	1/1:4,15:20:45.12:1281,45,0	1/1:8,17:25:30.57:1417,31,0	1/1:14,0:14:17.95:341,18,0
chr10	92415560	.	AAACAAAAC	A	9504.06	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-4.064;DP=605;FS=3.848;HRun=0;HaplotypeScore=153.4620;InbreedingCoeff=0.8784;MQ=62.42;MQ0=10;MQRankSum=-5.053;QD=42.81;ReadPosRankSum=2.216;VQSLOD=4.5911;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:39.11:0,39,936	0/1:5,0:5:15.28:15,0,179	0/0:20,0:15:39.60:0,40,774	0/0:36,0:20:50.54:0,51,794	0/0:20,0:20:36.12:0,36,939	0/0:21,0:21:30.10:0,30,927	0/0:25,0:25:3.01:0,3,94	1/1:3,36:39:99:1985,108,0	0/0:26,0:26:27.09:0,27,785	1/1:5,14:19:45.15:1067,45,0	1/1:0,8:8:21.07:450,21,0	1/1:3,27:30:57.20:1555,57,0	1/1:2,14:16:23.99:667,24,0	1/1:1,21:22:42.14:1111,42,0	0/0:24,0:24:21.54:0,22,547	0/0:27,0:27:27.09:0,27,809	0/0:20,0:20:18.03:0,18,330	1/1:1,11:12:6.02:168,6,0	0/0:29,0:27:81.27:0,81,1526	0/0:9,0:9:18.04:0,18,434	0/0:27,0:25:18.06:0,18,395	1/1:0,11:11:27.09:644,27,0	1/1:2,12:14:14.86:352,15,0	1/1:5,27:32:15.92:797,16,0	1/1:0,14:14:27.09:693,27,0	0/0:19,0:19:51.17:0,51,1323	0/0:27,0:25:45.62:0,46,1306	0/0:15,0:15:18.05:0,18,358
chr10	92415568	.	C	CAAAACAAAACAA	7968.51	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=0.283;DP=603;FS=2.617;HRun=0;HaplotypeScore=178.7278;InbreedingCoeff=-0.0547;MQ=66.30;MQ0=10;MQRankSum=-5.318;QD=16.13;ReadPosRankSum=5.348;VQSLOD=3.7048;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,21:40:30.10:1627,30,0	1/1:0,0:7:9.03:195,9,0	0/0:24,0:19:47.56:0,48,582	0/0:36,0:22:32.59:0,33,602	0/1:18,0:18:99:310,0,146	1/1:1,0:25:27.09:661,27,0	1/1:0,0:28:3.01:67,3,0	1/1:36,0:36:49.62:1251,50,0	0/1:22,0:22:99:344,0,186	0/1:17,0:17:99:210,0,470	1/1:8,0:8:13.12:139,13,0	0/1:27,0:27:40.24:40,0,676	0/1:14,0:14:4.23:4,0,345	0/0:21,0:21:3.66:0,4,474	1/1:1,0:25:12.51:309,13,0	1/1:2,19:27:21.54:1300,22,0	1/1:0,0:23:9.03:204,9,0	0/0:12,0:12:6.02:0,6,153	0/1:26,0:24:99:105,0,732	0/1:10,0:10:99:144,0,194	0/1:32,0:29:53.44:53,0,262	0/1:11,0:11:99:135,0,205	1/1:14,0:14:10.14:65,10,0	0/1:29,0:29:62.06:106,0,62	0/1:14,0:14:12.78:13,0,173	0/1:15,0:15:99:181,0,222	0/1:25,0:23:99:506,0,275	0/0:16,0:16:1.80:0,2,152
chr10	92415744	.	C	CT	7581.08	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-3.252;DP=707;FS=1.266;HRun=9;HaplotypeScore=131.0463;InbreedingCoeff=0.9786;MQ=72.73;MQ0=0;MQRankSum=0.113;QD=22.30;ReadPosRankSum=0.595;VQSLOD=3.4948;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:44:99:0,122,1021	1/1:11,0:11:29.69:129,30,0	0/0:24,0:25:20.22:0,20,282	0/0:10,0:10:13.69:0,14,91	0/0:37,0:37:99:0,104,877	0/0:30,0:30:66.49:0,66,721	0/0:19,0:19:53.97:0,54,465	1/1:3,29:32:80.99:815,81,0	0/0:23,0:23:65.87:0,66,554	1/1:5,27:33:84.14:891,84,0	1/1:5,21:27:52.44:606,52,0	1/1:2,22:24:60.03:632,60,0	1/1:2,18:20:5.05:512,5,0	1/1:1,10:11:27.07:297,27,0	1/1:28,0:28:25.59:230,26,0	0/0:24,0:24:65.98:0,66,573	1/1:39,0:39:77.96:416,78,0	1/1:2,28:30:68.86:762,69,0	0/0:28,0:27:71.97:0,72,622	0/0:29,0:30:85.76:0,86,721	0/0:21,0:21:56.98:0,57,492	1/1:3,18:21:33.80:500,34,0	1/1:1,25:26:63.17:697,63,0	1/1:2,14:16:39.11:431,39,0	1/1:1,21:22:60.16:664,60,0	0/0:22,0:23:61.43:0,61,497	0/0:37,0:37:99:0,105,903	0/0:13,0:14:23.03:0,23,188
chr10	92415753	.	T	TA	3752.58	PASS	AB=0.995;AC=21;AF=0.375;AN=56;BaseQRankSum=10.477;DP=713;FS=0.288;HRun=5;HaplotypeScore=135.9016;InbreedingCoeff=0.4783;MQ=68.09;MQ0=0;MQRankSum=0.696;QD=10.97;ReadPosRankSum=3.347;VQSLOD=1.0078;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,1271	1/1:0,11:11:33.11:420,33,0	0/0:22,0:20:9.15:0,9,271	0/0:7,0:7:14.35:0,14,114	0/0:39,0:39:99:0,102,1065	0/0:34,0:34:94.74:0,95,968	0/0:21,0:21:57.11:0,57,593	0/1:32,0:32:51.30:87,0,51	0/0:22,0:22:57.14:0,57,608	0/1:33,0:33:41.30:96,0,41	0/1:25,1:26:11.73:102,0,12	1/1:22,0:22:20.82:129,21,0	0/1:21,0:21:40.85:104,0,41	0/1:13,0:13:2.21:67,0,2	1/1:2,26:28:69.22:878,69,0	0/0:27,0:27:78.15:0,78,806	1/1:1,37:38:99:1335,105,0	1/1:29,0:29:52.91:188,53,0	0/0:27,0:27:75.17:0,75,789	0/0:32,0:32:93.08:0,93,953	0/0:20,0:20:54.12:0,54,568	0/1:23,0:23:53.79:54,0,120	0/1:29,0:29:30.96:105,0,31	1/1:15,0:15:6.95:80,7,0	1/1:22,0:22:18.24:108,18,0	0/0:26,0:26:62.79:0,63,631	0/0:40,0:40:99:0,114,1180	0/0:10,0:10:26.93:0,27,261
chr10	92416442	.	ATGTGTGTGTGTGTGTGTGTGTGTGTG	A	12376.96	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=8.234;DP=533;FS=5.242;HRun=0;HaplotypeScore=307.9531;InbreedingCoeff=0.8613;MQ=60.77;MQ0=9;MQRankSum=-6.678;QD=75.93;ReadPosRankSum=4.151;VQSLOD=3.6433;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:33:31.35:0,31,2189	0/0:6,0:10:7.27:0,7,563	0/0:17,0:12:9.02:0,9,355	0/0:22,0:16:24.07:0,24,764	0/0:14,0:14:15.04:0,15,1280	0/0:15,0:15:15.05:0,15,1311	0/0:45,0:45:62.62:0,63,4129	./.	0/0:26,0:26:33.17:0,33,3049	1/1:6,9:16:30.10:1884,30,0	1/1:4,1:5:3.01:203,3,0	1/1:8,19:27:33.11:2239,33,0	1/1:8,11:19:30.10:1978,30,0	1/1:7,11:18:24.08:1512,24,0	0/0:14,0:21:39.13:0,39,1915	0/0:19,0:19:9.03:0,9,830	0/0:16,0:26:39.13:0,39,2070	1/1:9,6:14:9.03:563,9,0	0/0:23,0:23:45.10:0,45,2661	0/0:5,0:8:3.01:0,3,340	0/0:31,0:29:28.96:0,29,2268	1/1:3,10:13:30.10:1978,30,0	1/1:4,4:8:6.02:407,6,0	1/1:15,14:29:18.02:837,18,0	1/1:7,6:13:11.97:776,12,0	0/0:21,0:21:54.19:0,54,4629	0/0:11,0:12:12.93:0,13,831	0/0:4,0:4:6:0,6,70
chr10	92418332	.	C	CAA	3861.97	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-8.585;DP=499;FS=0.436;HRun=11;HaplotypeScore=81.0531;InbreedingCoeff=0.8287;MQ=60.25;MQ0=14;MQRankSum=1.731;QD=21.70;ReadPosRankSum=-3.388;VQSLOD=2.4701;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:23:57.63:0,58,250	0/0:10,0:10:8.54:0,9,87	0/0:17,0:6:5.51:0,6,57	0/1:17,0:6:4.79:5,0,46	1/1:6,13:20:44.05:521,44,0	0/0:3,0:19:48.18:0,48,212	0/0:2,0:13:32.93:0,33,142	0/0:20,0:20:47.95:0,48,452	1/1:8,5:12:9.03:130,9,0	0/0:18,0:18:35.74:0,36,325	0/0:8,0:8:24.04:0,24,233	0/0:12,0:12:26.96:0,27,252	0/0:14,0:14:36.04:0,36,349	0/0:12,0:12:23.99:0,24,233	0/0:15,0:15:32.80:0,33,320	0/0:3,0:14:32:0,32,140	0/0:37,0:37:72.04:0,72,698	0/0:31,0:28:60.01:0,60,574	1/1:10,15:26:50.65:687,51,0	1/1:4,16:20:42.14:603,42,0	1/1:4,7:11:15.52:218,16,0	0/0:10,0:9:2.77:0,3,29	0/0:12,0:12:32.95:0,33,301	0/0:18,0:19:32.79:0,33,369	0/0:11,0:12:20.96:0,21,253	1/1:5,18:24:1.54:684,2,0	1/1:7,10:16:24.08:347,24,0	1/1:8,18:22:22.07:666,22,0
chr10	92418356	.	A	AGT	5113.86	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-4.023;DP=475;FS=0.422;HRun=0;HaplotypeScore=71.9603;InbreedingCoeff=0.9854;MQ=83.20;MQ0=4;MQRankSum=-5.429;QD=39.34;ReadPosRankSum=3.253;VQSLOD=6.9418;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:23:48.14:808,48,0	1/1:0,7:7:15.05:263,15,0	0/0:23,0:17:45.06:0,45,559	0/0:26,0:18:35.94:0,36,420	0/0:21,0:21:63.15:0,63,809	1/1:2,19:20:54.17:899,54,0	1/1:2,14:16:36.12:629,36,0	0/0:27,0:27:63.17:0,63,819	0/0:8,0:7:21.07:0,21,282	0/0:18,0:18:51.17:0,51,690	0/0:11,0:11:33.11:0,33,444	0/0:9,0:9:24.08:0,24,323	0/0:13,0:13:39.11:0,39,498	0/0:11,0:11:30.10:0,30,406	1/1:1,12:14:30.10:521,30,0	1/1:1,13:14:36.12:629,36,0	1/1:2,33:35:78.27:1365,78,0	0/0:27,0:26:63.17:0,63,831	0/0:28,0:27:78.23:0,78,1019	0/0:18,0:18:54.15:0,54,697	0/0:9,0:9:15.05:0,15,203	0/0:4,0:4:12.04:0,12,161	0/0:7,0:7:18.05:0,18,227	0/0:14,0:14:36.12:0,36,487	0/0:14,0:14:36.11:0,36,471	0/0:23,0:22:66.22:0,66,891	0/0:12,0:12:24.04:0,24,303	0/0:20,0:20:54.13:0,54,679
chr10	92418506	.	CTT	C	907.29	PASS	AB=0.828;AC=11;AF=0.196;AN=56;BaseQRankSum=4.473;DP=437;FS=0.606;HRun=16;HaplotypeScore=68.7551;InbreedingCoeff=0.4327;MQ=61.37;MQ0=33;MQRankSum=0.965;QD=7.56;ReadPosRankSum=3.775;VQSLOD=0.3036;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,16:22:14.74:319,15,0	0/1:7,1:8:27.15:27,0,84	0/0:25,0:5:1.25:0,1,3	0/1:24,0:11:0.22:0,0,0	0/0:14,0:16:35.76:0,36,417	1/1:2,15:16:38.96:326,39,0	0/1:5,4:9:14.90:63,0,15	0/0:34,0:26:38.38:0,38,398	0/0:10,0:8:12.04:0,12,156	0/0:13,0:12:17.01:0,17,194	0/0:12,0:12:17.99:0,18,213	0/0:5,0:5:13.84:0,14,114	0/0:11,0:10:23.98:0,24,259	0/0:8,0:9:18.28:0,18,188	0/1:13,4:17:14.35:14,0,186	1/1:2,13:15:35.68:300,36,0	0/0:25,5:27:12.92:0,13,322	0/0:14,0:13:28.41:0,28,298	0/0:21,0:16:34.52:0,35,333	0/1:4,1:6:13.14:13,0,70	0/0:14,0:14:15.86:0,16,158	0/0:4,0:5:11.40:0,11,125	0/0:2,0:2:3.01:0,3,39	0/0:5,0:3:3.01:0,3,39	0/0:16,0:18:34.01:0,34,287	0/0:27,0:25:43.59:0,44,443	0/0:21,0:22:40.89:0,41,415	0/0:21,0:19:36.10:0,36,452
chr10	92418510	.	T	TC	1178.88	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=10.346;DP=417;FS=0.000;HRun=0;HaplotypeScore=56.9733;InbreedingCoeff=0.7758;MQ=54.67;MQ0=39;MQRankSum=1.448;QD=8.54;ReadPosRankSum=7.391;VQSLOD=2.9731;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:21:18.62:177,19,0	1/1:5,3:8:20.11:131,20,0	0/1:22,0:2:0.88:1,0,10	0/0:18,0:6:1.02:0,1,39	0/0:17,0:17:38.35:0,38,441	1/1:16,0:15:31.20:123,31,0	0/1:6,0:6:21.87:22,0,28	0/0:31,0:23:61.14:0,61,544	0/0:9,0:7:17.08:0,17,196	0/0:13,0:12:35.71:0,36,345	0/0:14,0:13:33.03:0,33,362	0/0:5,0:5:14.99:0,15,154	0/0:13,0:12:33.01:0,33,341	0/0:9,0:9:20.74:0,21,222	1/1:6,10:16:37.98:306,38,0	1/1:15,0:15:29.33:121,29,0	1/1:16,15:28:59.58:484,60,0	0/0:15,0:13:32.96:0,33,365	0/0:21,0:16:47.57:0,48,475	0/0:6,0:6:17.98:0,18,167	0/0:11,0:11:24.85:0,25,232	0/0:6,0:5:15.04:0,15,179	0/0:3,0:2:6.01:0,6,68	0/0:5,0:3:9.01:0,9,91	0/0:19,0:18:42.46:0,42,428	0/0:27,0:24:70.01:0,70,713	0/0:22,0:20:47.22:0,47,479	0/0:15,0:13:36.08:0,36,432
chr10	92418513	.	T	TTC	811.04	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=5.143;DP=419;FS=0.625;HRun=0;HaplotypeScore=63.9173;InbreedingCoeff=0.6055;MQ=54.57;MQ0=42;MQRankSum=3.304;QD=9.32;ReadPosRankSum=4.167;VQSLOD=3.2452;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:21:9.85:0,10,78	1/1:5,3:8:16.56:132,17,0	0/0:21,0:2:5.31:0,5,27	0/0:19,0:6:8.29:0,8,38	0/0:17,0:17:41.19:0,41,484	0/1:17,0:16:0.84:1,0,37	0/0:8,0:7:0.67:0,1,43	0/0:32,0:24:58.21:0,58,557	0/0:8,0:6:14.92:0,15,188	0/0:13,0:12:35.92:0,36,351	0/0:12,0:11:33:0,33,365	0/0:5,0:5:14.99:0,15,163	0/0:13,0:12:33.02:0,33,355	0/0:10,0:10:7.43:0,7,236	1/1:7,10:17:31.91:316,32,0	0/1:15,0:15:5.01:5,0,52	1/1:15,15:27:39.06:498,39,0	0/0:15,0:13:32.94:0,33,384	0/0:22,0:17:50.90:0,51,527	0/0:5,0:5:14.98:0,15,145	0/0:11,0:11:21.84:0,22,202	0/0:6,0:5:12.04:0,12,160	0/0:3,0:2:6.01:0,6,70	0/0:4,0:2:5.98:0,6,63	0/0:19,0:18:45.29:0,45,434	0/0:28,0:24:69.92:0,70,750	0/0:21,0:19:50.14:0,50,505	0/0:16,0:14:36.08:0,36,449
chr10	92419161	.	TAC	T	3706.21	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.803;DP=618;FS=0.365;HRun=0;HaplotypeScore=159.9218;InbreedingCoeff=0.9969;MQ=75.63;MQ0=0;MQRankSum=-16.295;QD=17.73;ReadPosRankSum=1.480;VQSLOD=3.7805;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,2595	0/0:10,0:10:30.10:0,30,579	0/0:15,0:15:44.18:0,44,737	0/0:16,0:16:42.06:0,42,721	0/0:36,0:36:99:0,102,1925	0/0:18,0:18:54.19:0,54,1043	0/0:31,0:31:93.32:0,93,1784	1/1:14,14:28:42.10:441,42,0	0/0:25,0:25:75.22:0,75,1370	1/1:14,17:31:51.01:505,51,0	1/1:10,15:25:39.06:381,39,0	1/1:6,13:19:39.07:384,39,0	1/1:0,9:9:27.04:260,27,0	1/1:6,8:14:27.04:258,27,0	0/0:29,0:29:87.28:0,87,1638	0/0:19,0:19:57.20:0,57,1082	0/0:30,0:30:90.31:0,90,1709	1/1:4,8:12:26.73:260,27,0	0/0:14,0:14:39.13:0,39,722	0/0:24,0:24:72.25:0,72,1380	0/0:45,0:45:99:0,135,2529	1/1:7,13:20:37.31:343,37,0	1/1:7,8:15:28.26:254,28,0	1/1:13,4:17:15:137,15,0	1/1:3,16:19:50.76:484,51,0	0/0:25,1:26:42.41:0,42,1270	0/0:16,0:15:48.16:0,48,927	0/0:9,0:9:27.09:0,27,521
chr10	92419165	.	TCC	T	3651.18	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.980;DP=544;FS=0.367;HRun=3;HaplotypeScore=146.9067;InbreedingCoeff=0.9941;MQ=80.51;MQ0=0;MQRankSum=-16.271;QD=28.09;ReadPosRankSum=2.221;VQSLOD=2.8549;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,2599	0/0:10,0:10:30.10:0,30,580	0/0:17,0:17:27.64:0,28,602	0/0:15,0:15:33.09:0,33,578	0/0:33,0:33:90.31:0,90,1739	0/0:21,0:21:63.21:0,63,1185	0/0:34,0:34:99:0,99,1906	1/1:0,14:14:42.10:442,42,0	0/0:26,0:26:78.27:0,78,1506	1/1:0,17:17:51.05:507,51,0	1/1:0,15:15:39.06:381,39,0	1/1:0,13:13:39.07:385,39,0	1/1:0,9:9:27.04:260,27,0	1/1:0,8:8:24.04:233,24,0	0/0:28,0:28:84.29:0,84,1610	0/0:19,0:19:57.20:0,57,1093	0/0:29,0:29:87.30:0,87,1672	1/1:1,8:9:26.65:260,27,0	0/0:16,0:16:42.14:0,42,766	0/0:22,0:22:63.22:0,63,1211	0/0:49,0:49:99:0,144,2721	1/1:1,14:16:41.78:361,42,0	1/1:0,8:8:24.03:228,24,0	1/1:0,4:4:12.02:114,12,0	1/1:0,16:17:50.12:480,50,0	0/0:25,1:26:45.38:0,45,1361	0/0:16,0:15:48.16:0,48,921	0/0:8,0:8:24.08:0,24,464
chr10	92419176	.	TG	T	5270.81	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=17.619;DP=608;FS=1.548;HRun=3;HaplotypeScore=145.0808;InbreedingCoeff=0.9905;MQ=74.70;MQ0=0;MQRankSum=-16.038;QD=27.45;ReadPosRankSum=2.077;VQSLOD=4.2023;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,147,2075	0/0:10,0:10:30.10:0,30,432	0/0:13,1:14:16.31:0,16,381	0/0:15,0:15:26.41:0,26,313	0/0:28,0:28:78.25:0,78,1105	0/0:22,0:22:66.21:0,66,932	0/0:33,0:33:90.29:0,90,1276	1/1:0,26:26:78.23:954,78,0	0/0:25,0:25:75.25:0,75,1080	1/1:0,27:26:75.19:910,75,0	1/1:0,19:19:39:462,39,0	1/1:0,17:17:42.13:520,42,0	1/1:0,10:10:30.09:371,30,0	1/1:0,20:20:30.09:371,30,0	0/0:29,0:29:87.28:0,87,1236	0/0:21,0:21:63.21:0,63,907	0/0:30,0:30:90.30:0,90,1295	1/1:0,12:12:24.08:297,24,0	0/0:19,0:19:57.15:0,57,796	0/0:21,0:21:63.21:0,63,907	0/0:51,0:51:99:0,150,2106	1/1:0,18:18:35.88:385,36,0	1/1:0,11:11:24.01:278,24,0	1/1:0,9:9:11.94:129,12,0	1/1:0,23:23:48.15:594,48,0	0/0:28,1:29:47.10:0,47,1090	0/0:15,0:14:45.15:0,45,647	0/0:5,0:5:15.05:0,15,216
chr10	92420022	.	AT	A	1651.32	PASS	AB=0.851;AC=9;AF=0.161;AN=56;BaseQRankSum=5.085;DP=605;FS=1.353;HRun=12;HaplotypeScore=105.0129;InbreedingCoeff=0.5632;MQ=70.52;MQ0=0;MQRankSum=-1.188;QD=11.39;ReadPosRankSum=2.734;VQSLOD=3.4554;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,34:44:77.11:782,77,0	0/0:0,0:7:17.64:0,18,92	0/0:18,0:17:11.83:0,12,92	0/1:14,0:11:6.39:6,0,87	0/0:22,3:26:7.44:0,7,401	0/1:8,15:23:16.79:257,0,17	1/1:2,23:28:58.40:508,58,0	0/0:26,0:26:54.52:0,55,520	0/0:19,2:21:10.63:0,11,466	0/0:25,2:27:1.62:0,2,380	0/0:16,0:16:33.89:0,34,319	0/0:28,0:28:61.89:0,62,588	0/0:21,1:22:24.75:0,25,397	0/0:20,1:21:24.76:0,25,396	0/0:5,0:28:28.41:0,28,144	1/1:3,15:18:32.66:246,33,0	0/0:4,0:24:31.12:0,31,159	0/0:21,2:23:7.61:0,8,417	0/0:23,0:27:37.65:0,38,372	0/0:18,1:21:33.30:0,33,474	0/0:11,0:13:29.73:0,30,272	0/0:15,0:15:30.05:0,30,299	0/0:11,0:11:27.04:0,27,268	0/0:23,2:26:16.49:0,16,510	0/1:16,1:18:4.50:5,0,302	0/0:28,1:29:36.88:0,37,553	0/0:20,1:21:27.84:0,28,447	0/0:7,0:9:23.83:0,24,210
chr10	92420253	.	C	CA	9781.92	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-1.634;DP=554;FS=1.080;HRun=5;HaplotypeScore=62.4201;InbreedingCoeff=0.9732;MQ=72.96;MQ0=0;MQRankSum=0.055;QD=31.97;ReadPosRankSum=2.572;VQSLOD=5.5231;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:33:78.01:1049,78,0	0/0:11,0:11:27.07:0,27,290	0/0:20,0:18:36.61:0,37,402	0/0:15,0:13:2.73:0,3,246	0/0:35,0:35:96.24:0,96,1027	1/1:1,18:19:54.18:711,54,0	1/1:1,11:12:24.08:316,24,0	1/1:4,17:21:48.14:611,48,0	0/0:12,0:12:36.09:0,36,386	1/1:1,28:29:87.25:1120,87,0	1/1:3,19:22:54.17:706,54,0	1/1:1,10:11:30.10:388,30,0	1/1:2,12:14:21.07:276,21,0	1/1:1,17:18:45.15:592,45,0	0/0:22,0:22:57.14:0,57,611	1/1:2,13:15:33.11:434,33,0	0/0:20,0:20:54.13:0,54,580	1/1:0,15:15:36.12:474,36,0	0/0:23,0:23:60.14:0,60,638	0/0:25,0:25:72.17:0,72,765	0/0:12,0:12:33.08:0,33,354	1/1:0,27:27:66.21:861,66,0	1/1:2,24:26:69.22:902,69,0	1/1:1,13:14:30.10:395,30,0	1/1:4,26:30:72.23:947,72,0	0/0:20,0:19:54.11:0,54,571	0/0:26,0:25:72.18:0,72,773	0/0:7,0:7:21.05:0,21,226
chr10	92421748	.	TCA	T	821.88	PASS	AB=0.894;AC=33;AF=0.635;AN=52;BaseQRankSum=1.564;DP=537;FS=7.579;HRun=0;HaplotypeScore=77.3270;InbreedingCoeff=0.1884;MQ=68.54;MQ0=6;MQRankSum=1.165;QD=2.44;ReadPosRankSum=1.591;VQSLOD=0.7928;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,7:36:11.86:110,12,0	0/0:3,0:3:3.01:0,3,44	./.	0/0:33,0:21:0:0,0,0	1/1:10,2:12:3.01:32,3,0	0/0:11,0:11:6.01:0,6,67	0/1:22,2:24:50.04:50,0,81	0/0:23,0:22:2.98:0,3,21	1/1:15,5:20:6.01:64,6,0	1/1:16,0:17:2.84:14,3,0	1/1:11,0:11:2.99:25,3,0	1/1:7,5:12:9.02:96,9,0	1/1:8,1:10:3.01:32,3,0	1/1:15,1:17:8.22:78,8,0	0/0:17,0:29:14.99:0,15,129	0/1:13,1:14:20.13:20,0,99	0/0:20,0:32:21.04:0,21,255	1/1:11,1:14:4.28:43,4,0	0/0:14,0:14:0.89:0,1,2	./.	1/1:24,4:27:3:32,3,0	1/1:12,2:14:3.01:32,3,0	1/1:15,0:15:1.55:4,2,0	0/1:26,9:34:17.10:230,0,17	1/1:8,3:11:2.74:32,3,0	0/1:20,0:20:8.10:8,0,36	0/1:7,1:9:33.21:37,0,33	1/1:14,0:16:5.68:28,6,0
chr10	92422295	.	G	GGTGTGT	4171.20	PASS	AB=0.921;AC=47;AF=0.979;AN=48;BaseQRankSum=-3.244;DP=559;FS=4.607;HRun=0;HaplotypeScore=134.2224;InbreedingCoeff=-0.1153;MQ=69.50;MQ0=15;MQRankSum=1.636;QD=8.86;ReadPosRankSum=1.368;VQSLOD=2.6157;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:35:0.77:291,0,1	1/1:7,0:8:5.69:48,6,0	./.	./.	1/1:9,0:9:3.01:67,3,0	1/1:12,0:17:3.01:38,3,0	1/1:23,0:24:17.99:338,18,0	1/1:18,0:18:5.52:54,6,0	1/1:10,2:13:6.02:192,6,0	1/1:22,0:22:20.93:273,21,0	1/1:9,0:10:3.01:67,3,0	1/1:9,8:20:12.04:279,12,0	1/1:6,3:13:3.01:96,3,0	1/1:11,0:13:2.82:38,3,0	1/1:10,0:16:2.43:37,2,0	1/1:14,2:22:9.03:231,9,0	1/1:17,0:28:9.03:104,9,0	1/1:17,7:24:14.08:290,14,0	1/1:24,0:25:24.08:479,24,0	1/1:18,0:20:11.23:244,11,0	1/1:23,0:27:3.01:66,3,0	1/1:13,0:13:2.43:93,2,0	1/1:17,0:17:3.01:67,3,0	1/1:14,0:27:4.95:74,5,0	./.	1/1:25,0:28:30.96:582,31,0	1/1:14,0:13:11.80:123,12,0	./.
chr10	92422464	.	C	CTTTGGTGGCA	21280.52	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-1.541;DP=440;FS=35.675;HRun=0;HaplotypeScore=184.9658;InbreedingCoeff=0.9692;MQ=90.35;MQ0=0;MQRankSum=-12.089;QD=102.31;ReadPosRankSum=-1.643;VQSLOD=3.1586;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,4:12:18.06:917,18,0	0/0:4,0:4:12.04:0,12,369	0/0:26,0:26:63.22:0,63,1862	0/0:20,0:20:41.87:0,42,1245	0/0:17,0:17:45.15:0,45,1467	1/1:5,7:14:18.53:910,19,0	1/1:3,4:8:15.05:787,15,0	1/1:17,6:26:69.17:2706,69,0	0/0:11,0:11:30.10:0,30,926	1/1:6,10:19:45.15:2118,45,0	1/1:2,16:18:51.18:2655,51,0	1/1:4,5:9:24.08:1165,24,0	1/1:5,2:7:15.05:662,15,0	1/1:3,2:5:15.05:642,15,0	0/0:21,0:21:54.19:0,54,1704	1/1:6,5:11:21.07:905,21,0	0/0:6,0:6:18.06:0,18,566	1/1:7,1:8:9.03:350,9,0	0/0:25,0:25:69.18:0,69,1990	0/0:16,0:16:45.15:0,45,1349	0/0:24,0:24:66.23:0,66,2090	1/1:10,14:25:58.14:2783,58,0	1/1:6,17:25:57.66:2846,58,0	1/1:0,5:5:9.03:472,9,0	1/1:9,5:16:31.05:1362,31,0	0/0:27,0:27:72.25:0,72,2291	0/0:17,0:17:48.08:0,48,1375	0/0:18,0:18:54.19:0,54,1744
chr10	92422635	.	CATCGTGACGTGT	C	1264.40	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=5.764;DP=264;FS=7.155;HRun=0;HaplotypeScore=139.7199;InbreedingCoeff=0.6844;MQ=79.78;MQ0=0;MQRankSum=-5.072;QD=79.02;ReadPosRankSum=4.154;VQSLOD=3.3040;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:3.01:0,3,37	0/0:10,0:10:15.05:0,15,949	0/0:18,0:17:48.16:0,48,2027	0/0:24,0:21:56.88:0,57,1859	0/0:14,0:14:24.08:0,24,1470	0/0:14,0:14:12.04:0,12,234	0/0:14,0:14:2.77:0,3,36	1/1:1,0:1:3.01:52,3,0	0/0:9,0:9:9.03:0,9,571	1/1:0,1:1:3.01:97,3,0	1/1:0,3:3:9.03:255,9,0	1/1:0,1:1:3.01:92,3,0	1/1:0,2:2:6.02:185,6,0	1/1:0,1:1:3.01:98,3,0	0/0:19,0:19:5.77:0,6,381	0/0:10,0:10:9.03:0,9,105	0/0:14,0:14:30.10:0,30,1700	1/1:0,2:2:6.02:188,6,0	0/0:13,0:13:38.88:0,39,1759	0/0:15,0:15:24.08:0,24,1515	0/0:20,0:20:29.40:0,29,1872	1/1:0,1:1:3.01:95,3,0	1/1:1,2:3:9.03:281,9,0	./.	1/1:0,1:1:3.01:93,3,0	0/0:19,0:19:57.20:0,57,3408	0/0:9,0:9:17.86:0,18,1088	0/0:14,0:14:30.10:0,30,1650
chr10	92422650	.	GTACACGTGCGCGCGCGCGCGCGCGCA	G	2667.15	PASS	AC=18;AF=0.346;AN=52;BaseQRankSum=5.645;DP=258;FS=9.779;HRun=0;HaplotypeScore=193.6317;InbreedingCoeff=0.7053;MQ=77.95;MQ0=2;MQRankSum=-4.543;QD=177.81;ReadPosRankSum=2.997;VQSLOD=2.4516;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:3.01:0,3,60	0/0:8,0:9:15.05:0,15,1306	0/0:17,0:13:35.79:0,36,597	0/0:21,0:15:17.14:0,17,504	0/0:14,0:14:33.11:0,33,3098	0/0:11,0:11:12.03:0,12,183	0/0:18,0:18:6.54:0,7,148	./.	0/0:7,0:7:9.03:0,9,771	1/1:0,1:1:3.01:194,3,0	1/1:0,3:3:9.03:545,9,0	1/1:0,1:1:3.01:189,3,0	1/1:0,2:2:6.02:378,6,0	1/1:0,0:1:3.01:188,3,0	0/0:16,0:16:6.02:0,6,553	0/0:6,0:6:9.03:0,9,176	0/0:19,0:19:39.88:0,40,2547	1/1:0,2:2:6.02:382,6,0	0/0:15,0:15:45.10:0,45,2516	0/0:14,0:14:30.10:0,30,2791	0/0:20,0:20:36.09:0,36,3682	1/1:0,1:1:3.01:193,3,0	1/1:1,2:3:9.03:572,9,0	./.	1/1:0,1:1:3.01:190,3,0	0/0:22,0:22:66.07:0,66,5657	0/0:9,0:9:19.84:0,20,1050	0/0:13,0:13:27.09:0,27,2940
chr10	92422654	.	ACG	A	406.85	PASS	AB=0.531;AC=25;AF=0.481;AN=52;BaseQRankSum=7.836;DP=250;FS=27.099;HRun=0;HaplotypeScore=106.8337;InbreedingCoeff=0.6688;MQ=74.93;MQ0=3;MQRankSum=-5.405;QD=6.90;ReadPosRankSum=4.000;VQSLOD=1.5413;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,10:12:3.01:44,3,0	0/0:10,0:10:15.03:0,15,223	0/0:14,0:10:15.79:0,16,166	0/0:19,0:13:8.26:0,8,157	0/0:15,0:15:36.10:0,36,599	1/1:0,8:8:12.04:168,12,0	0/1:2,15:17:7.67:37,0,8	./.	0/0:7,0:7:9.03:0,9,159	1/1:1,0:1:2.84:14,3,0	1/1:3,0:3:8.18:37,8,0	1/1:1,0:1:2.84:14,3,0	1/1:2,0:2:5.68:28,6,0	1/1:1,0:1:2.84:14,3,0	0/0:14,0:14:6.02:0,6,103	1/1:1,5:6:9.03:132,9,0	0/0:19,0:19:34.98:0,35,412	1/1:3,0:2:5.68:28,6,0	0/0:15,0:15:39.07:0,39,580	0/0:14,0:14:33.07:0,33,557	0/0:20,0:20:39.05:0,39,673	1/1:1,0:1:2.84:14,3,0	1/1:3,0:3:8.52:42,9,0	./.	1/1:1,0:1:2.84:14,3,0	0/0:22,0:22:56.55:0,57,992	0/0:9,0:9:15.70:0,16,211	0/0:13,0:13:27.09:0,27,513
chr10	92422657	.	T	TGC	1842.45	PASS	AB=0.837;AC=17;AF=0.327;AN=52;BaseQRankSum=-6.443;DP=259;FS=1.817;HRun=0;HaplotypeScore=109.0397;InbreedingCoeff=0.0726;MQ=70.89;MQ0=3;MQRankSum=3.927;QD=9.96;ReadPosRankSum=-2.408;VQSLOD=2.8900;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:12:2.84:0,3,14	1/1:9,0:10:5.89:37,6,0	1/1:13,0:9:0.47:1,0,0	0/0:17,0:11:4.99:0,5,22	1/1:14,4:18:29.99:412,30,0	0/0:7,0:8:8.99:0,9,43	0/0:11,0:15:5.56:0,6,36	./.	0/1:8,1:9:27.18:59,0,27	0/0:1,0:1:2.84:0,3,14	0/0:3,0:3:6.15:0,6,29	0/0:1,0:1:2.84:0,3,14	0/0:2,0:2:5.68:0,6,28	0/0:1,0:1:2.84:0,3,14	1/1:10,0:13:3:26,3,0	0/0:4,0:6:8.52:0,9,42	0/1:14,0:19:15.17:76,0,15	0/0:3,0:2:5.68:0,6,28	0/1:17,0:17:24.22:57,0,24	0/1:9,5:14:24.33:241,0,24	0/1:14,8:22:21.85:314,0,22	0/0:1,0:1:2.84:0,3,14	0/0:3,0:3:8.52:0,9,42	./.	0/0:1,0:1:2.84:0,3,14	0/1:19,6:25:58.67:403,0,59	0/1:10,2:12:57.44:108,0,57	1/1:11,2:13:23.57:256,24,0
chr10	92422668	.	GCGCGCGCACA	G	2004.87	PASS	AB=1.000;AC=26;AF=0.500;AN=52;BaseQRankSum=5.174;DP=293;FS=29.363;HRun=0;HaplotypeScore=137.9812;InbreedingCoeff=0.5562;MQ=55.68;MQ0=8;MQRankSum=-5.681;QD=16.71;ReadPosRankSum=3.091;VQSLOD=1.0233;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,3:18:6.02:137,6,0	0/0:12,0:12:16.60:0,17,379	0/0:9,0:5:2.75:0,3,34	0/1:12,0:6:0.81:1,0,20	0/0:18,0:18:51.18:0,51,1947	1/1:4,5:10:15.05:353,15,0	1/1:23,7:30:20.95:382,21,0	./.	0/0:11,0:11:18.06:0,18,741	0/1:2,0:2:2.72:61,0,3	1/1:3,0:3:9.03:173,9,0	1/1:1,0:1:3.01:65,3,0	1/1:2,0:2:6.02:129,6,0	1/1:1,0:1:3.01:88,3,0	0/0:13,0:13:9.03:0,9,268	1/1:5,3:8:12.04:325,12,0	0/1:21,0:21:22.98:23,0,769	0/1:5,0:3:33.83:121,0,34	0/0:19,0:18:44.75:0,45,917	0/0:15,0:15:33:0,33,1083	0/0:21,0:21:42.08:0,42,1550	1/1:1,0:1:3.01:68,3,0	1/1:3,0:3:9.03:196,9,0	./.	1/1:2,0:1:3.01:66,3,0	0/0:26,0:26:75.24:0,75,2520	0/0:12,0:12:21.04:0,21,831	0/0:16,0:15:33.11:0,33,1305
chr10	92422674	.	GCA	G	936.61	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=3.768;DP=378;FS=27.983;HRun=0;HaplotypeScore=122.3356;InbreedingCoeff=0.7628;MQ=54.60;MQ0=8;MQRankSum=-4.623;QD=5.68;ReadPosRankSum=0.244;VQSLOD=1.5953;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:8.88:58,9,0	0/0:10,0:10:6.46:0,6,50	0/0:10,0:5:5.92:0,6,38	0/0:13,0:7:3.01:0,3,35	0/0:21,0:21:57.05:0,57,592	1/1:12,0:12:11.69:68,12,0	1/1:31,2:33:29.37:200,29,0	1/1:13,0:12:28.08:144,28,0	0/0:9,0:9:21.02:0,21,229	1/1:1,10:11:8.69:67,9,0	1/1:3,3:6:8.99:75,9,0	1/1:6,0:6:3:26,3,0	1/1:7,0:7:8.95:71,9,0	1/1:4,0:4:2.97:20,3,0	0/0:11,0:12:14.78:0,15,113	1/1:11,0:11:17.73:113,18,0	0/0:19,0:20:29.04:0,29,235	1/1:13,0:11:2.61:119,3,0	0/0:15,0:14:23.98:0,24,243	0/0:16,0:16:30.04:0,30,315	0/0:24,0:24:22.13:0,22,416	1/1:1,7:8:3.01:30,3,0	1/1:5,0:5:8.92:82,9,0	1/1:7,0:7:5.94:41,6,0	1/1:9,0:8:3:27,3,0	0/0:30,0:31:38.11:0,38,567	0/0:14,0:15:30.04:0,30,323	0/0:17,0:16:36.02:0,36,361
chr10	92424694	.	GC	G	10387.52	PASS	AB=0.958;AC=52;AF=0.929;AN=56;BaseQRankSum=-6.491;DP=689;FS=2.131;HRun=3;HaplotypeScore=178.5467;InbreedingCoeff=0.4885;MQ=64.00;MQ0=1;MQRankSum=2.108;QD=15.19;ReadPosRankSum=4.098;VQSLOD=4.4566;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,10:44:93.13:620,93,0	0/1:4,0:4:2.67:40,0,3	0/0:4,0:5:11.62:0,12,110	0/1:10,1:11:13.73:14,0,124	1/1:10,2:12:28.24:199,28,0	1/1:14,2:16:41.96:284,42,0	1/1:15,7:22:50.73:428,51,0	1/1:16,12:28:62.30:425,62,0	1/1:17,5:22:50.57:362,51,0	1/1:19,9:28:53.95:459,54,0	1/1:8,1:9:17.77:145,18,0	1/1:22,6:28:45.76:399,46,0	1/1:11,5:16:31.98:236,32,0	1/1:23,5:28:63.82:432,64,0	1/1:24,3:27:59.21:442,59,0	1/1:16,3:19:44.29:333,44,0	1/1:38,9:47:99:743,107,0	1/1:25,9:34:80.39:560,80,0	1/1:17,9:25:62.95:438,63,0	1/1:12,5:17:19.16:154,19,0	1/1:69,17:86:99:1419,192,0	1/1:7,4:11:20.12:147,20,0	1/1:8,1:9:13.32:98,13,0	1/1:27,8:35:75.51:587,76,0	1/1:20,6:26:43.07:324,43,0	1/1:26,9:35:72.94:544,73,0	1/1:21,10:31:52.72:364,53,0	1/1:9,4:13:15.75:191,16,0
chr10	92424699	.	C	CG	16832.32	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.913;DP=679;FS=6.491;HRun=0;HaplotypeScore=156.1122;InbreedingCoeff=0.8206;MQ=63.52;MQ0=0;MQRankSum=-4.648;QD=25.39;ReadPosRankSum=3.012;VQSLOD=4.9045;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:35,11:46:99:1213,124,0	1/1:4,0:4:8.11:82,8,0	0/0:6,0:6:8.80:0,9,59	0/0:10,0:10:2.81:0,3,124	1/1:11,2:13:32.29:316,32,0	1/1:14,2:16:44.84:458,45,0	1/1:19,7:26:68.18:736,68,0	1/1:15,12:27:79.34:712,79,0	1/1:14,6:20:55.90:546,56,0	1/1:19,7:26:64.51:651,65,0	1/1:8,1:9:17.71:168,18,0	1/1:22,6:28:72.50:678,73,0	1/1:12,5:17:43.69:374,44,0	1/1:21,5:26:76.34:672,76,0	1/1:20,6:26:77.20:804,77,0	1/1:13,3:16:47.13:444,47,0	1/1:38,9:47:99:1282,130,0	1/1:23,9:32:89.38:850,89,0	1/1:17,10:27:74.01:718,74,0	1/1:10,6:16:41.15:366,41,0	1/1:69,16:85:99:2004,207,0	1/1:7,5:12:29.34:292,29,0	1/1:9,1:10:26.15:263,26,0	1/1:28,8:36:83.01:795,83,0	1/1:18,6:24:69.26:575,69,0	1/1:22,9:31:91.07:863,91,0	1/1:21,10:30:78.23:661,78,0	1/1:8,4:12:23.31:312,23,0
chr10	92424873	.	AT	A	7508.63	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=10.168;DP=628;FS=0.000;HRun=9;HaplotypeScore=76.6237;InbreedingCoeff=0.9951;MQ=72.09;MQ0=0;MQRankSum=1.529;QD=20.46;ReadPosRankSum=2.137;VQSLOD=5.4104;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,39:41:99:933,102,0	0/0:18,0:18:48.14:0,48,554	0/0:15,0:15:29.93:0,30,286	0/0:13,0:13:12.66:0,13,153	0/0:13,0:13:36.07:0,36,387	1/1:0,15:15:36.02:329,36,0	1/1:2,26:28:72.03:659,72,0	1/1:13,18:31:50.99:467,51,0	0/0:21,0:21:48.14:0,48,551	1/1:6,30:36:87:786,87,0	1/1:4,12:16:29.96:266,30,0	1/1:2,22:24:57.03:522,57,0	1/1:2,18:20:42.02:384,42,0	1/1:1,22:23:66.03:603,66,0	0/0:20,0:20:51.14:0,51,579	1/1:3,10:13:24.01:220,24,0	0/0:41,0:41:99:0,105,1212	1/1:4,28:32:66.03:604,66,0	0/0:24,0:23:54.14:0,54,609	0/0:12,0:12:36.02:0,36,398	0/0:19,0:19:54.12:0,54,594	1/1:3,13:17:26.74:226,27,0	1/1:5,19:24:45.01:412,45,0	1/1:1,20:21:51.02:467,51,0	1/1:2,24:26:69.03:631,69,0	0/0:24,1:25:35.71:0,36,651	0/0:31,0:31:84.18:0,84,929	0/0:8,0:8:21.06:0,21,242
chr10	92425489	.	GAAA	G	2446.54	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-5.247;DP=331;FS=1.925;HRun=15;HaplotypeScore=55.2861;InbreedingCoeff=0.9141;MQ=75.69;MQ0=0;MQRankSum=-1.420;QD=15.58;ReadPosRankSum=7.887;VQSLOD=1.5226;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,14:22:17.92:202,18,0	0/0:2,0:4:9.03:0,9,123	0/0:24,0:15:17.39:0,17,157	0/0:16,0:13:17.55:0,18,185	0/0:7,0:20:43.64:0,44,562	1/1:2,13:16:28.52:334,29,0	1/1:3,8:12:11.96:163,12,0	1/1:4,8:12:20.81:223,21,0	0/0:6,0:17:15.05:0,15,206	1/1:5,5:10:11.92:134,12,0	1/1:2,5:9:14.93:151,15,0	1/1:5,8:13:17.98:202,18,0	1/1:2,3:5:15.04:167,15,0	1/1:3,5:8:15.01:168,15,0	0/0:5,0:13:18.06:0,18,258	1/1:0,2:2:6.02:67,6,0	0/0:9,0:13:18.92:0,19,229	1/1:7,8:15:14.74:168,15,0	0/0:5,0:10:24.08:0,24,379	0/0:4,0:10:27.07:0,27,375	0/0:3,0:7:12.04:0,12,164	1/1:1,8:9:24.04:269,24,0	1/1:2,3:5:5.98:67,6,0	1/1:1,6:8:11.96:119,12,0	1/1:1,10:11:21.02:235,21,0	0/0:6,0:21:43.31:0,43,556	0/0:6,0:10:9.03:0,9,134	0/0:3,0:7:12.04:0,12,188
chr10	92428353	.	CG	C	2506.46	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.196;DP=566;FS=4.720;HRun=6;HaplotypeScore=55.2406;InbreedingCoeff=0.9880;MQ=79.70;MQ0=1;MQRankSum=-1.228;QD=21.99;ReadPosRankSum=1.688;VQSLOD=2.8541;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,30:34:72.18:774,72,0	0/0:9,0:9:27.09:0,27,355	0/0:16,0:16:41.88:0,42,482	0/0:16,0:16:42.01:0,42,495	0/0:18,0:18:48:0,48,626	1/1:4,21:25:60.15:643,60,0	1/1:2,31:33:66.17:709,66,0	0/0:12,0:12:30.06:0,30,362	0/0:17,0:17:45.13:0,45,565	0/0:17,0:17:45.12:0,45,573	0/0:13,0:13:36.12:0,36,473	0/0:30,0:30:87.24:0,87,1097	0/0:21,0:21:63.19:0,63,809	0/0:21,0:21:60.15:0,60,756	0/0:26,0:26:72.23:0,72,946	1/1:2,20:22:17.67:541,18,0	0/0:28,0:28:78.23:0,78,991	0/0:33,0:33:90.26:0,90,1154	0/0:20,0:20:54.10:0,54,672	0/0:13,0:13:30.10:0,30,394	0/0:28,0:28:81.21:0,81,1004	0/0:12,0:12:33.11:0,33,434	0/0:14,0:14:42.13:0,42,533	0/0:36,0:35:93.28:0,93,1192	0/0:10,0:10:27.09:0,27,355	0/0:22,0:22:57.19:0,57,747	0/0:16,0:16:45.15:0,45,592	0/0:4,0:4:12.03:0,12,143
chr10	92431316	.	T	TC	15940.94	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-18.987;DP=718;FS=7.950;HRun=2;HaplotypeScore=65.0542;InbreedingCoeff=0.9868;MQ=84.39;MQ0=0;MQRankSum=-0.921;QD=39.36;ReadPosRankSum=2.881;VQSLOD=5.3438;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,150,1812	1/1:0,8:8:24.08:346,24,0	0/0:21,0:21:53.76:0,54,642	0/0:21,0:21:45.13:0,45,541	0/0:26,0:26:75.24:0,75,930	1/1:1,36:37:99:1511,105,0	1/1:0,23:23:63.21:907,63,0	1/1:1,32:33:93.30:1321,93,0	0/0:27,0:27:81.24:0,81,991	1/1:0,28:28:81.25:1144,81,0	1/1:1,16:17:48.16:690,48,0	1/1:1,18:19:48.16:691,48,0	1/1:0,22:22:66.22:950,66,0	1/1:2,31:33:93.31:1339,93,0	1/1:0,20:20:54.04:778,54,0	1/1:0,20:19:51.17:735,51,0	1/1:1,31:32:93.31:1339,93,0	1/1:0,16:16:42.14:605,42,0	0/0:23,0:23:63.19:0,63,771	0/0:37,0:37:99:0,108,1325	0/0:19,0:19:54.17:0,54,669	1/1:4,25:29:69.23:994,69,0	1/1:1,27:28:72.24:1037,72,0	1/1:0,23:23:63.21:907,63,0	1/1:1,16:17:45.15:648,45,0	0/0:29,2:31:6.84:0,7,970	0/0:32,0:32:96.30:0,96,1190	0/0:26,0:26:78.25:0,78,967
chr10	92432173	.	C	CA	11012.73	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-16.498;DP=695;FS=5.390;HRun=1;HaplotypeScore=77.3103;InbreedingCoeff=0.9964;MQ=64.72;MQ0=2;MQRankSum=0.585;QD=41.25;ReadPosRankSum=3.266;VQSLOD=5.5225;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,153,1969	0/0:6,0:6:18.06:0,18,234	0/0:26,0:23:59.15:0,59,723	0/0:30,0:23:47.99:0,48,593	0/0:27,0:27:75.20:0,75,954	0/0:23,0:23:69.22:0,69,896	0/0:23,0:23:63.19:0,63,803	1/1:3,27:28:75.25:1106,75,0	0/0:26,0:26:75.24:0,75,973	1/1:1,26:27:81.25:1185,81,0	1/1:0,11:11:30.10:449,30,0	1/1:0,21:21:63.21:944,63,0	1/1:1,35:36:95.96:1439,96,0	1/1:0,26:26:75.25:1124,75,0	0/0:18,0:18:51.13:0,51,620	0/0:15,0:15:42.14:0,42,541	0/0:32,0:32:87.28:0,87,1129	1/1:0,33:33:93.32:1394,93,0	0/0:24,0:22:66.21:0,66,857	0/0:20,0:20:57.19:0,57,740	0/0:52,0:52:99:0,141,1816	1/1:0,13:13:33.11:494,33,0	1/1:1,18:19:57.19:849,57,0	1/1:1,26:27:33.29:995,33,0	1/1:0,24:24:69.23:1034,69,0	0/0:23,0:22:63.19:0,63,805	0/0:26,0:26:72.23:0,72,931	0/0:5,0:5:15.05:0,15,195
chr10	92432249	.	TCTTCCTTCCTTCCTTCCTTC	T	5242.06	PASS	AC=16;AF=0.308;AN=52;BaseQRankSum=6.211;DP=677;FS=10.410;HRun=0;HaplotypeScore=351.3725;InbreedingCoeff=0.9075;MQ=66.51;MQ0=9;MQRankSum=-0.841;QD=26.34;ReadPosRankSum=-0.141;VQSLOD=1.7549;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:19.72:0,20,3677	0/0:5,0:4:9.03:0,9,288	./.	./.	1/1:12,17:29:18.89:278,19,0	0/0:19,0:19:27.09:0,27,716	0/0:25,0:24:9.78:0,10,452	0/0:39,0:37:19.88:0,20,311	1/1:10,20:30:21.07:1009,21,0	0/0:21,0:21:39.12:0,39,2190	0/0:13,0:14:21.04:0,21,992	0/0:25,0:25:60.21:0,60,3228	0/0:33,0:33:66.70:0,67,4018	0/0:13,0:22:51.17:0,51,2130	0/0:21,0:21:45.11:0,45,978	0/0:24,0:23:44.50:0,45,1231	0/0:15,0:15:18.06:0,18,700	0/0:35,0:35:2.63:0,3,4706	1/1:11,12:23:36.12:647,36,0	1/1:8,15:22:27:585,27,0	1/1:37,0:37:40.05:605,40,0	0/0:27,0:27:45.11:0,45,2250	0/0:17,0:17:39.12:0,39,1654	0/0:24,0:24:42.14:0,42,2479	0/0:13,0:26:51.18:0,51,2505	1/1:4,14:18:39.10:1370,39,0	1/1:7,16:23:12.51:589,13,0	1/1:11,5:15:2.71:158,3,0
chr10	92432486	.	CT	C	3391.14	PASS	AB=0.797;AC=51;AF=0.911;AN=56;BaseQRankSum=1.994;DP=488;FS=26.038;HRun=14;HaplotypeScore=85.2674;InbreedingCoeff=0.2045;MQ=63.73;MQ0=2;MQRankSum=2.378;QD=6.95;ReadPosRankSum=3.953;VQSLOD=0.6616;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:23,3:30:0.65:1,0,422	1/1:1,0:3:4.06:12,4,0	0/1:15,1:10:1.35:1,0,95	0/1:14,0:9:4.60:5,0,20	1/1:7,16:26:17.26:237,17,0	1/1:5,0:18:18.30:53,18,0	1/1:3,0:21:28.49:83,28,0	1/1:10,7:18:16.71:108,17,0	1/1:4,1:6:4.97:26,5,0	1/1:6,13:22:41.70:262,42,0	0/1:6,8:14:48.71:135,0,49	1/1:6,12:18:23.43:164,23,0	1/1:7,8:16:19.80:129,20,0	1/1:1,12:14:31.75:208,32,0	1/1:3,0:23:32.57:94,33,0	1/1:1,0:15:20.37:59,20,0	1/1:4,1:23:33.47:109,33,0	1/1:4,9:13:20.75:144,21,0	1/1:6,7:16:20.79:120,21,0	1/1:6,8:16:7.85:135,8,0	1/1:9,11:23:32.79:203,33,0	1/1:7,7:15:18.80:114,19,0	1/1:5,5:10:13.92:88,14,0	1/1:7,13:21:9.43:204,9,0	1/1:8,14:23:36.43:237,36,0	1/1:5,15:22:20.85:272,21,0	1/1:7,8:16:0.53:89,1,0	0/1:3,7:11:23.40:99,0,23
chr10	92432585	.	CT	C	1274.54	PASS	AB=0.699;AC=17;AF=0.304;AN=56;BaseQRankSum=-7.042;DP=493;FS=2.849;HRun=14;HaplotypeScore=93.4509;InbreedingCoeff=0.5193;MQ=60.13;MQ0=7;MQRankSum=5.072;QD=7.08;ReadPosRankSum=4.011;VQSLOD=3.1149;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,2:29:5.87:0,6,349	0/0:4,0:6:8.65:0,9,49	0/0:18,1:14:8.96:0,9,70	0/0:20,0:11:5.13:0,5,53	0/0:15,0:20:40.60:0,41,239	0/0:9,0:15:25.83:0,26,144	0/0:11,0:13:12.10:0,12,73	0/1:15,10:25:39.88:155,0,40	0/0:9,0:14:23.55:0,24,129	1/1:6,6:13:6.83:166,7,0	1/1:4,3:7:8.91:62,9,0	0/1:7,11:18:11.92:69,0,12	0/1:9,5:16:3.64:93,0,4	0/1:10,4:14:8.11:89,0,8	0/0:11,0:20:43.73:0,44,262	0/0:9,0:18:40.48:0,40,235	0/0:11,1:16:15.39:0,15,184	1/1:5,9:14:6.03:91,6,0	0/0:18,0:23:40.70:0,41,256	0/0:10,0:11:17.57:0,18,117	0/0:16,0:17:14.09:0,14,74	1/1:2,9:11:22.36:138,22,0	1/1:4,8:13:16.89:109,17,0	1/1:15,13:29:52.48:349,52,0	0/1:10,6:17:47.05:137,0,47	0/0:12,0:21:28.77:0,29,171	0/0:21,0:30:64.16:0,64,422	0/0:6,0:13:31.93:0,32,198
chr10	92432611	.	TTC	T	2097.59	PASS	AB=1.000;AC=22;AF=0.407;AN=54;BaseQRankSum=5.635;DP=461;FS=2.522;HRun=0;HaplotypeScore=87.9831;InbreedingCoeff=0.4300;MQ=49.71;MQ0=11;MQRankSum=-4.831;QD=8.10;ReadPosRankSum=4.737;VQSLOD=3.3515;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:31:2.70:24,3,0	1/1:0,6:6:12:145,12,0	./.	0/0:12,0:4:5.88:0,6,45	0/1:22,0:19:34.38:34,0,44	1/1:0,12:12:21.07:312,21,0	1/1:4,11:14:18.04:254,18,0	0/0:13,0:13:39.04:0,39,598	0/1:12,0:12:0.35:0,0,39	0/0:17,0:17:51.13:0,51,901	0/0:10,0:10:30.07:0,30,469	0/0:13,0:13:21.06:0,21,368	0/0:15,0:15:30.34:0,30,461	0/0:17,0:17:45.96:0,46,763	1/1:5,9:14:33.28:484,33,0	1/1:11,7:18:40.87:545,41,0	1/1:13,5:17:15.92:242,16,0	0/0:21,0:21:44.54:0,45,578	0/1:19,0:17:7.43:14,0,7	0/1:16,0:16:26.71:54,0,27	0/1:14,0:13:2.47:2,0,36	0/0:16,0:15:32.96:0,33,467	0/0:14,0:14:32.61:0,33,400	0/0:26,0:26:53:0,53,915	0/0:24,0:23:63.07:0,63,986	0/1:22,0:21:73.57:157,0,74	0/1:26,0:26:7.52:8,0,61	0/1:13,0:12:5.79:6,0,16
chr10	92432612	.	TC	T	4760.33	PASS	AC=30;AF=0.556;AN=54;BaseQRankSum=3.115;DP=429;FS=5.318;HRun=2;HaplotypeScore=68.0094;InbreedingCoeff=0.9609;MQ=49.85;MQ0=11;MQRankSum=-4.480;QD=19.75;ReadPosRankSum=1.658;VQSLOD=4.8972;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:29:60.10:732,60,0	1/1:6,0:6:11.24:59,11,0	./.	0/0:10,0:4:2.04:0,2,6	1/1:9,12:18:41.82:462,42,0	1/1:12,0:12:20.32:110,20,0	1/1:12,0:11:16.07:82,16,0	0/0:12,0:12:27:0,27,336	1/1:3,7:10:15.05:193,15,0	0/0:16,0:16:48.14:0,48,654	0/0:10,0:10:30.03:0,30,340	0/0:13,0:13:20.97:0,21,274	0/0:13,0:13:24.07:0,24,320	0/0:15,0:15:42.11:0,42,548	1/1:14,0:14:37.58:226,38,0	1/1:15,1:18:41.36:303,41,0	1/1:14,2:15:20.76:150,21,0	0/0:18,0:18:26.49:0,26,376	1/1:5,13:16:42.14:536,42,0	1/1:1,14:15:23.98:255,24,0	1/1:10,5:14:17.39:233,17,0	0/0:15,0:14:32.70:0,33,358	0/0:13,0:13:26.78:0,27,258	0/0:25,0:25:48.12:0,48,634	0/0:23,0:22:62.98:0,63,734	1/1:5,15:19:49.68:486,50,0	1/1:7,15:22:48.15:611,48,0	1/1:8,4:11:27.05:323,27,0
chr10	92433022	.	ACAGAGCCTGAGACCGTGCCACCTG	A	10364.92	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.886;DP=629;FS=8.453;HRun=0;HaplotypeScore=379.9182;InbreedingCoeff=0.9717;MQ=91.48;MQ0=0;MQRankSum=-11.820;QD=95.09;ReadPosRankSum=4.343;VQSLOD=3.1116;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,144,14311	1/1:0,9:9:27.09:1759,27,0	0/0:34,0:34:90.30:0,90,5741	0/0:22,0:22:57.20:0,57,4625	0/0:29,0:29:84.29:0,84,8356	1/1:4,9:13:24.08:1565,24,0	1/1:12,12:24:27.09:1760,27,0	0/0:27,0:27:78.26:0,78,6273	0/0:26,0:26:75.26:0,75,7699	0/0:20,0:20:60.21:0,60,5705	0/0:11,0:11:27.09:0,27,2288	0/0:21,0:21:63.22:0,63,6288	0/0:23,0:23:66.23:0,66,6543	0/0:25,0:25:75.26:0,75,7988	1/1:9,12:21:33.11:2151,33,0	1/1:10,12:22:36.12:2349,36,0	1/1:11,9:20:12.04:781,12,0	0/0:20,0:20:57.20:0,57,5505	0/0:23,0:23:60.20:0,60,4602	0/0:19,0:19:54.19:0,54,5401	0/0:39,0:39:99:0,117,11776	0/0:17,0:17:45.15:0,45,4812	0/0:22,0:22:66.23:0,66,6425	0/0:30,0:30:78.27:0,78,8323	0/0:18,0:18:45.15:0,45,4148	0/0:21,0:21:63.22:0,63,6934	0/0:19,0:19:54.17:0,54,4999	0/0:2,0:2:6.02:0,6,678
chr10	92433288	.	TGGGG	T	3130.23	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-0.826;DP=356;FS=0.566;HRun=13;HaplotypeScore=71.2414;InbreedingCoeff=0.7994;MQ=78.33;MQ0=2;MQRankSum=-0.688;QD=30.99;ReadPosRankSum=8.603;VQSLOD=2.0319;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:17:9.83:0,10,94	1/1:3,8:11:24.06:351,24,0	0/0:19,0:17:39.08:0,39,572	0/0:14,0:12:6.24:0,6,308	0/0:11,0:19:15.57:0,16,117	1/1:4,14:18:45.13:655,45,0	1/1:4,13:19:39.04:531,39,0	0/0:13,0:19:14.92:0,15,152	0/0:5,0:11:11.75:0,12,76	0/0:8,0:8:3.01:0,3,72	0/0:3,0:4:6.02:0,6,144	0/0:18,0:19:18.06:0,18,419	0/0:12,0:12:21.07:0,21,419	0/0:12,0:13:21.07:0,21,447	1/1:1,15:16:39.11:570,39,0	1/1:2,7:9:21.06:304,21,0	1/1:6,21:28:63.10:902,63,0	0/0:17,0:17:24.97:0,25,567	0/0:3,0:9:15.55:0,16,134	0/0:4,0:7:5.85:0,6,34	0/0:4,0:7:8.86:0,9,79	0/0:5,0:5:9.03:0,9,209	0/0:3,0:5:6.02:0,6,129	0/0:13,0:13:9.03:0,9,195	0/0:5,0:5:6.02:0,6,118	0/0:5,0:11:14.78:0,15,117	0/0:9,0:14:11.75:0,12,71	0/0:2,0:6:11.70:0,12,69
chr10	92433449	.	TA	T	4368.23	PASS	AB=0.987;AC=45;AF=0.804;AN=56;BaseQRankSum=6.663;DP=526;FS=8.282;HRun=7;HaplotypeScore=127.2876;InbreedingCoeff=-0.0157;MQ=73.50;MQ0=3;MQRankSum=-1.058;QD=8.74;ReadPosRankSum=-3.308;VQSLOD=1.4441;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:19.93:20,0,64	1/1:2,10:13:26.94:264,27,0	0/1:35,0:20:5.23:5,0,32	0/0:25,1:16:9.49:0,9,85	0/1:25,1:26:61.54:83,0,62	1/1:3,15:19:37.32:346,37,0	1/1:0,14:15:38.11:370,38,0	1/1:22,0:22:41.94:168,42,0	0/1:16,0:16:20.58:57,0,21	1/1:22,0:22:40.94:191,41,0	1/1:15,0:15:24.39:112,24,0	1/1:23,0:23:42.61:209,43,0	1/1:18,0:18:32.16:148,32,0	1/1:10,0:11:20.66:86,21,0	1/1:8,17:25:58.65:572,59,0	1/1:3,6:9:11.94:107,12,0	1/1:3,21:24:51.27:540,51,0	1/1:22,0:22:37.04:181,37,0	0/1:17,1:18:23.48:96,0,23	0/1:21,0:21:39.46:63,0,39	1/1:6,2:8:2.77:104,3,0	1/1:14,0:14:23.58:117,24,0	1/1:12,0:12:8.15:65,8,0	1/1:11,0:11:21.93:99,22,0	1/1:14,0:14:33.89:168,34,0	0/1:23,0:23:14.62:83,0,15	0/1:24,0:24:44.17:75,0,44	0/1:12,0:12:22.23:40,0,22
chr10	92434242	.	GAC	G	5536.14	PASS	AB=0.990;AC=36;AF=0.643;AN=56;BaseQRankSum=11.096;DP=696;FS=0.341;HRun=0;HaplotypeScore=183.4456;InbreedingCoeff=-0.0886;MQ=71.45;MQ0=3;MQRankSum=-4.587;QD=9.00;ReadPosRankSum=12.242;VQSLOD=2.4140;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1950	1/1:13,0:13:14.07:120,14,0	0/0:25,0:21:40.42:0,40,670	0/0:16,0:13:39.09:0,39,667	0/1:17,1:19:6.43:166,0,6	1/1:18,0:18:45.37:228,45,0	0/1:31,0:31:3.37:243,0,3	0/1:20,0:20:49.59:50,0,225	0/1:41,0:41:22.29:340,0,22	0/1:26,0:26:88.65:191,0,89	1/1:17,0:17:5.28:102,5,0	1/1:35,1:36:43.32:409,43,0	1/1:31,0:31:64.29:448,64,0	0/1:34,0:34:26.54:306,0,27	0/1:28,0:28:51.01:232,0,51	0/1:24,1:23:13.57:233,0,14	0/1:26,0:26:12.90:241,0,13	1/1:24,0:24:12.07:207,12,0	0/1:19,0:19:99:107,0,107	0/1:13,0:13:14.12:79,0,14	1/1:54,0:54:54.12:533,54,0	1/1:16,0:16:39.72:206,40,0	1/1:21,1:22:22.60:245,23,0	1/1:29,0:29:33.05:322,33,0	0/1:23,0:23:32.83:130,0,33	1/1:18,0:19:3.12:152,3,0	0/1:20,0:19:20.65:157,0,21	0/1:11,0:11:17.14:89,0,17
chr10	92434243	.	ACT	A	17729.42	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=5.310;DP=692;FS=1.089;HRun=0;HaplotypeScore=144.3957;InbreedingCoeff=0.9902;MQ=72.22;MQ0=3;MQRankSum=-3.999;QD=29.02;ReadPosRankSum=5.842;VQSLOD=6.3607;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:90.29:0,90,1465	1/1:0,13:13:30.10:382,30,0	0/0:25,1:22:14.43:0,14,556	0/0:17,0:14:32.67:0,33,494	1/1:6,13:19:39.60:497,40,0	1/1:0,18:18:48.15:611,48,0	1/1:3,27:31:78.08:969,78,0	1/1:11,9:20:27.04:302,27,0	1/1:7,34:41:93.30:1184,93,0	1/1:6,20:26:60.10:703,60,0	1/1:5,12:17:21.07:267,21,0	1/1:4,32:36:87.23:1086,87,0	1/1:0,30:30:87.28:1107,87,0	1/1:5,29:34:81.26:1031,81,0	1/1:4,23:27:63.20:802,63,0	1/1:4,21:23:57.18:724,57,0	1/1:5,22:27:66.68:841,67,0	1/1:2,21:23:57.18:726,57,0	1/1:6,13:19:39.10:480,39,0	1/1:3,10:13:27:307,27,0	1/1:4,50:54:99:1680,132,0	1/1:0,16:16:42.13:534,42,0	1/1:4,17:21:42.13:531,42,0	1/1:2,27:29:81.26:1031,81,0	1/1:6,17:23:39.04:460,39,0	1/1:2,16:19:50.96:597,51,0	1/1:3,17:19:45.14:573,45,0	1/1:2,8:10:24.08:306,24,0
chr10	92435122	.	T	TG	2627.80	PASS	AB=1.000;AC=30;AF=0.556;AN=54;BaseQRankSum=-0.557;DP=336;FS=0.000;HRun=8;HaplotypeScore=58.5583;InbreedingCoeff=0.8091;MQ=69.94;MQ0=0;MQRankSum=-2.127;QD=15.74;ReadPosRankSum=-0.266;VQSLOD=3.3586;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:56.96:0,57,521	1/1:2,5:7:14.99:157,15,0	0/0:12,0:12:4.17:0,4,148	0/0:10,0:9:20.92:0,21,180	0/0:11,0:11:21.01:0,21,192	1/1:3,19:22:51.15:586,51,0	1/1:5,16:21:24.61:528,25,0	./.	0/0:12,0:12:30.01:0,30,274	1/1:5,0:5:2.37:55,2,0	0/1:5,0:5:0:0,0,0	1/1:4,2:6:8.96:82,9,0	1/1:6,0:8:8.72:51,9,0	1/1:3,0:5:4.09:17,4,0	1/1:2,13:15:30.09:346,30,0	1/1:2,12:14:30.05:331,30,0	1/1:6,16:22:42.12:485,42,0	1/1:3,0:11:17.04:86,17,0	0/0:16,0:16:36.01:0,36,329	0/0:10,0:10:21:0,21,192	0/0:33,0:33:84.02:0,84,764	0/1:5,0:5:0:0,0,0	1/1:4,0:4:2.97:20,3,0	1/1:4,0:10:8.64:48,9,0	1/1:5,0:7:5.80:34,6,0	0/0:10,0:10:30.02:0,30,274	0/0:12,0:12:33:0,33,297	0/0:10,0:10:23.99:0,24,215
chr10	92435279	.	A	AAAAAAAG	5171.11	PASS	AB=0.974;AC=41;AF=0.732;AN=56;BaseQRankSum=-2.830;DP=427;FS=6.854;HRun=0;HaplotypeScore=142.7219;InbreedingCoeff=-0.0685;MQ=36.05;MQ0=18;MQRankSum=-0.618;QD=13.40;ReadPosRankSum=0.668;VQSLOD=3.6905;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:22:91.99:106,0,92	0/1:9,0:10:1.49:56,0,1	0/0:14,0:2:3.48:0,3,31	0/0:27,0:6:5.14:0,5,88	0/1:19,0:17:43.96:114,0,44	1/1:11,0:20:29.31:351,29,0	1/1:13,0:15:31.69:334,32,0	1/1:8,12:25:63.18:782,63,0	0/1:12,0:12:6.20:71,0,6	1/1:2,0:9:14.45:304,14,0	1/1:3,5:11:5.93:107,6,0	1/1:11,0:12:35.60:467,36,0	1/1:10,0:10:6.02:168,6,0	1/1:10,0:10:19.68:220,20,0	1/1:7,0:11:14.07:244,14,0	0/1:9,0:12:6.08:272,0,6	1/1:13,0:13:25.59:257,26,0	1/1:5,8:15:11.87:261,12,0	0/1:25,0:24:99:123,0,190	0/1:23,0:22:68.67:165,0,69	0/1:13,0:11:16.29:16,0,159	1/1:5,1:5:8.88:85,9,0	1/1:11,0:11:13.34:78,13,0	1/1:7,0:8:12.26:104,12,0	1/1:11,0:11:24.65:247,25,0	0/1:23,0:23:56.31:93,0,56	0/1:20,0:20:67.84:127,0,68	0/1:10,0:10:16.43:16,0,72
chr10	92435296	.	TTGTGTGTGTGTGTGTG	T	5209.94	PASS	AB=0.777;AC=31;AF=0.574;AN=54;BaseQRankSum=0.370;DP=310;FS=9.853;HRun=0;HaplotypeScore=125.0156;InbreedingCoeff=0.4354;MQ=40.50;MQ0=16;MQRankSum=-1.860;QD=35.44;ReadPosRankSum=1.910;VQSLOD=3.4206;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:17:12.04:0,12,831	0/0:1,0:8:14.26:0,14,202	0/0:16,0:2:0.47:0,0,1	0/0:31,0:6:3.01:0,3,62	1/1:5,6:10:3.01:132,3,0	0/0:10,0:14:18.06:0,18,522	0/0:10,0:14:3.01:0,3,120	0/0:13,0:12:4.22:0,4,24	1/1:2,6:7:12.04:529,12,0	1/1:4,0:4:5.69:135,6,0	1/1:7,0:7:3.01:125,3,0	1/1:13,0:13:18.06:737,18,0	1/1:6,0:6:6.02:252,6,0	1/1:6,0:6:3.01:125,3,0	0/0:5,0:9:8.52:0,9,145	0/1:2,1:9:99:109,0,253	0/0:6,0:8:11.53:0,12,151	0/0:14,0:12:3.01:0,3,65	1/1:12,8:20:16.32:720,16,0	1/1:6,8:13:9.03:396,9,0	./.	1/1:6,0:5:9.03:373,9,0	1/1:5,0:5:6.02:251,6,0	1/1:5,0:5:3.01:125,3,0	0/1:9,0:9:15.94:240,0,16	1/1:4,3:7:9.03:314,9,0	1/1:1,6:7:6.02:264,6,0	0/1:7,3:9:99:382,0,289
chr10	92435324	.	GTGTGTGTGTGTGTGTA	G	5499.94	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=5.867;DP=364;FS=3.569;HRun=0;HaplotypeScore=146.3866;InbreedingCoeff=0.2582;MQ=53.36;MQ0=17;MQRankSum=-3.518;QD=25.94;ReadPosRankSum=4.196;VQSLOD=3.8961;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:18:30.42:0,30,1367	0/0:10,0:10:19.87:0,20,362	0/0:23,0:5:9.01:0,9,268	0/0:23,0:6:9.03:0,9,308	0/1:23,0:22:79.73:80,0,200	0/0:16,0:16:24.05:0,24,599	0/0:22,0:19:21.38:0,21,630	1/1:12,0:8:20.76:142,21,0	0/1:10,0:9:46.92:436,0,47	1/1:8,1:9:16.15:276,16,0	1/1:7,3:10:14.95:258,15,0	1/1:2,14:16:18.06:834,18,0	1/1:1,7:8:8.95:302,9,0	1/1:11,1:12:20.75:264,21,0	0/0:7,0:7:14.98:0,15,313	0/1:11,0:11:75.93:76,0,602	0/0:16,0:15:23.82:0,24,253	0/1:9,0:9:29.50:84,0,29	0/1:20,0:20:99:531,0,210	0/1:14,0:13:57.63:325,0,58	0/0:17,0:13:11.89:0,12,87	1/1:1,3:4:9.03:428,9,0	1/1:1,6:7:6.02:286,6,0	1/1:1,9:10:3.01:143,3,0	1/1:4,6:10:6.02:285,6,0	0/1:8,0:8:95.91:228,0,96	0/1:13,0:13:99:201,0,129	0/1:6,0:6:99:323,0,261
chr10	92436921	.	T	TA	5828.31	PASS	AB=0.611;AC=41;AF=0.732;AN=56;BaseQRankSum=-5.361;DP=506;FS=0.538;HRun=12;HaplotypeScore=58.7326;InbreedingCoeff=0.0983;MQ=70.79;MQ0=1;MQRankSum=-0.038;QD=12.92;ReadPosRankSum=3.270;VQSLOD=4.9733;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:34:28.57:0,29,341	0/1:2,8:10:9.94:66,0,10	0/0:9,0:5:2.97:0,3,21	0/0:12,0:9:1.69:0,2,26	1/1:5,16:21:21.78:274,22,0	0/1:7,12:19:1.04:139,0,1	1/1:0,10:10:18.03:175,18,0	0/1:9,15:25:41.35:289,0,41	1/1:3,10:13:6.18:187,6,0	1/1:6,16:23:10.01:267,10,0	1/1:4,14:21:27.64:369,28,0	0/1:8,9:17:0.91:128,0,1	1/1:4,8:12:17.91:157,18,0	1/1:1,10:11:3.57:184,4,0	0/1:9,9:18:3.35:153,0,3	1/1:4,13:18:13.30:323,13,0	0/1:4,15:19:25.62:227,0,26	1/1:8,13:21:14.13:292,14,0	1/1:2,14:17:27.64:342,28,0	1/1:5,19:27:38.64:468,39,0	0/1:7,7:15:40.40:124,0,40	1/1:6,15:23:13.13:315,13,0	0/1:4,10:14:39.12:122,0,39	1/1:2,12:15:23.87:219,24,0	1/1:4,17:22:1.28:200,1,0	1/1:14,7:22:41.35:349,41,0	0/1:6,13:19:6.32:256,0,6	1/1:8,10:18:21.03:204,21,0
chr10	92437076	.	C	CTT	19511.40	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-1.715;DP=667;FS=0.292;HRun=2;HaplotypeScore=89.2960;InbreedingCoeff=0.9984;MQ=85.72;MQ0=1;MQRankSum=-4.215;QD=50.42;ReadPosRankSum=2.453;VQSLOD=4.6623;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,1615	1/1:2,14:16:39.13:731,39,0	0/0:19,0:18:48.15:0,48,663	0/0:27,0:27:69.19:0,69,907	0/0:27,0:27:81.26:0,81,1171	1/1:2,22:24:63.22:1180,63,0	1/1:0,22:22:63.22:1180,63,0	1/1:2,26:30:87.26:1536,87,0	0/0:21,0:21:63.19:0,63,906	1/1:1,18:20:60.19:1057,60,0	1/1:0,18:20:48.08:809,48,0	1/1:0,17:17:48.16:899,48,0	1/1:0,16:15:45.15:843,45,0	1/1:1,12:13:39.13:730,39,0	1/1:0,24:24:69.24:1293,69,0	1/1:0,35:35:90.31:1686,90,0	1/1:0,36:35:90.29:1686,90,0	1/1:1,24:25:69.24:1293,69,0	0/0:16,0:16:48.15:0,48,685	0/0:19,0:19:57.16:0,57,797	0/0:51,0:51:99:0,141,2034	1/1:0,10:10:30.10:562,30,0	1/1:1,23:26:69.24:1288,69,0	1/1:0,31:31:87.30:1626,87,0	1/1:1,21:22:60.21:1114,60,0	0/0:25,1:26:19.04:0,19,1004	0/0:27,0:26:78.26:0,78,1145	0/0:7,0:7:21.07:0,21,307
chr10	92438639	.	T	TA	1106.15	PASS	AB=1.000;AC=12;AF=0.222;AN=54;BaseQRankSum=3.621;DP=281;FS=28.046;HRun=0;HaplotypeScore=67.0161;InbreedingCoeff=0.7219;MQ=67.24;MQ0=2;MQRankSum=-3.532;QD=21.69;ReadPosRankSum=3.481;VQSLOD=2.4961;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:30.10:0,30,417	0/1:6,0:6:3.18:65,0,3	0/0:4,0:3:9.02:0,9,103	0/0:12,0:11:20.59:0,21,183	0/0:10,0:10:30.10:0,30,418	1/1:1,13:14:39.13:500,39,0	./.	0/0:41,0:40:83.53:0,84,468	0/0:8,0:8:24.08:0,24,335	0/0:9,0:9:17.55:0,18,124	0/0:11,0:11:21.69:0,22,100	0/0:5,0:5:11.34:0,11,79	0/0:7,0:7:9.56:0,10,65	0/0:8,0:8:5.59:0,6,37	1/1:2,4:6:15.50:178,16,0	1/1:1,3:3:8.02:114,8,0	1/1:1,14:14:33.05:402,33,0	0/0:7,0:6:9.36:0,9,38	0/0:24,0:24:72.20:0,72,942	0/0:10,0:10:30.10:0,30,416	0/0:8,0:8:21.07:0,21,293	1/1:1,0:1:1.25:3,1,0	0/1:5,0:5:0.78:1,0,12	0/0:3,0:3:5.61:0,6,51	0/0:15,0:15:22.83:0,23,170	0/0:10,0:10:27.08:0,27,362	0/0:18,0:17:51.16:0,51,685	0/0:8,0:8:24.08:0,24,335
chr10	92438640	.	T	TA	5210.10	PASS	AC=32;AF=0.593;AN=54;BaseQRankSum=9.538;DP=278;FS=2.303;HRun=3;HaplotypeScore=52.1662;InbreedingCoeff=0.8869;MQ=63.79;MQ0=2;MQRankSum=-0.429;QD=33.40;ReadPosRankSum=-0.330;VQSLOD=4.9090;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:30.09:0,30,357	1/1:1,5:6:9.03:118,9,0	0/0:4,0:2:3.01:0,3,36	0/0:11,0:10:17.77:0,18,128	0/0:10,0:10:30.09:0,30,358	1/1:14,0:14:42.12:542,42,0	./.	1/1:11,29:39:99:1380,105,0	0/0:8,0:8:24.07:0,24,287	1/1:2,7:9:24.08:328,24,0	1/1:1,10:11:33.11:447,33,0	1/1:3,2:5:9.03:120,9,0	1/1:2,5:7:21:247,21,0	1/1:1,7:8:21.07:286,21,0	1/1:5,0:5:12.04:159,12,0	1/1:4,0:3:9.03:120,9,0	1/1:15,0:14:36.06:441,36,0	1/1:2,6:7:21.07:286,21,0	0/0:23,0:23:66.17:0,66,761	0/0:10,0:10:27.08:0,27,323	0/0:8,0:8:21.05:0,21,239	1/1:0,1:1:3.01:41,3,0	1/1:0,5:5:15.05:204,15,0	1/1:1,2:3:3.01:41,3,0	1/1:4,11:15:33.11:451,33,0	0/0:10,0:10:27.06:0,27,304	0/0:18,0:17:51.14:0,51,596	0/0:8,0:8:24.07:0,24,286
chr10	92438669	.	GA	G	1514.10	PASS	AC=18;AF=0.375;AN=48;BaseQRankSum=3.611;DP=286;FS=10.024;HRun=2;HaplotypeScore=47.6403;InbreedingCoeff=0.8443;MQ=36.52;MQ0=41;MQRankSum=-7.595;QD=17.61;ReadPosRankSum=-1.026;VQSLOD=2.2465;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:11:18.02:0,18,244	0/0:5,0:5:5.98:0,6,65	./.	./.	0/0:12,0:12:15.05:0,15,225	0/0:18,0:18:33.07:0,33,468	0/0:4,0:4:8.99:0,9,110	1/1:2,19:17:48.16:623,48,0	0/0:7,0:7:12.04:0,12,178	1/1:1,5:6:15.05:195,15,0	1/1:2,8:9:6.01:64,6,0	1/1:2,3:3:3.01:39,3,0	1/1:0,7:7:12.04:155,12,0	1/1:0,8:8:9.03:117,9,0	0/0:11,0:11:21.07:0,21,314	0/0:4,0:4:8.97:0,9,90	0/0:20,0:16:27.09:0,27,405	1/1:0,11:7:15.05:195,15,0	0/0:18,0:17:45.15:0,45,663	0/0:11,0:11:18.06:0,18,269	0/0:11,0:5:9.03:0,9,135	1/1:0,6:6:12.04:155,12,0	./.	./.	1/1:2,10:11:12.04:156,12,0	0/0:12,0:12:36.08:0,36,508	0/0:21,0:20:32.94:0,33,494	0/0:5,0:4:6.02:0,6,90
chr10	92439542	.	TTAAATAAA	T	711.28	PASS	AC=8;AF=0.174;AN=46;BaseQRankSum=4.137;DP=287;FS=7.041;HRun=0;HaplotypeScore=66.1122;InbreedingCoeff=0.5416;MQ=55.33;MQ0=3;MQRankSum=-4.718;QD=13.95;ReadPosRankSum=-0.053;VQSLOD=0.6200;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:24.08:0,24,845	1/1:3,2:5:3.01:76,3,0	./.	./.	0/0:10,0:10:9.03:0,9,371	1/1:6,12:18:21.07:529,21,0	./.	0/0:17,0:12:2.99:0,3,24	0/0:10,0:10:15.05:0,15,574	0/0:9,0:8:6.02:0,6,179	./.	0/0:6,0:6:6.02:0,6,221	0/0:10,0:10:12.04:0,12,490	0/0:8,0:7:6.02:0,6,214	1/1:5,3:8:5.98:95,6,0	./.	1/1:12,8:19:6.02:138,6,0	0/0:29,0:29:51.17:0,51,1860	0/0:20,0:18:18.06:0,18,700	0/0:8,0:8:9.03:0,9,370	0/0:2,0:2:3.01:0,3,123	0/0:8,0:8:3.01:0,3,124	0/0:5,0:5:3.90:0,4,121	0/0:6,0:6:3.01:0,3,122	0/0:12,0:12:18.06:0,18,651	0/0:5,0:5:6.02:0,6,247	0/0:18,0:18:9.03:0,9,370	0/0:8,0:9:27.06:0,27,853
chr10	92439611	.	GGAGGAA	G	2241.58	PASS	AB=0.976;AC=22;AF=0.393;AN=56;BaseQRankSum=7.464;DP=311;FS=29.326;HRun=0;HaplotypeScore=105.0238;InbreedingCoeff=0.7945;MQ=52.45;MQ0=22;MQRankSum=-7.926;QD=17.51;ReadPosRankSum=-0.849;VQSLOD=1.4131;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:10:21.02:0,21,524	0/0:3,0:3:9:0,9,225	0/0:19,0:8:6.01:0,6,70	0/1:18,0:8:2.64:3,0,134	0/0:12,0:9:15.05:0,15,495	0/0:19,0:14:24.02:0,24,561	0/0:4,0:4:9.03:0,9,275	0/1:10,0:6:35.71:77,0,36	0/0:13,0:8:19.30:0,19,404	1/1:15,3:18:50.90:648,51,0	1/1:6,0:6:12.75:128,13,0	1/1:8,0:8:23.81:277,24,0	1/1:10,0:10:24.88:242,25,0	1/1:12,2:12:25.63:279,26,0	0/0:15,0:7:18.06:0,18,496	0/0:9,0:4:6.02:0,6,160	0/0:13,0:11:21.07:0,21,685	1/1:15,2:17:22.96:317,23,0	0/0:16,0:9:27.09:0,27,756	0/0:6,0:6:12:0,12,326	0/0:11,0:9:21.01:0,21,436	1/1:5,1:6:14.71:164,15,0	1/1:4,1:5:11.73:118,12,0	1/1:6,0:6:9.08:41,9,0	1/1:8,0:8:15.03:157,15,0	0/0:8,0:6:18.06:0,18,485	0/0:14,0:11:27.09:0,27,844	0/0:7,0:7:18.06:0,18,524
chr10	92439622	.	A	AGG	1688.98	PASS	AB=0.769;AC=17;AF=0.304;AN=56;BaseQRankSum=6.642;DP=330;FS=28.059;HRun=2;HaplotypeScore=98.3734;InbreedingCoeff=0.5040;MQ=46.27;MQ0=23;MQRankSum=-6.791;QD=15.78;ReadPosRankSum=2.720;VQSLOD=-0.4355;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:9:21.06:0,21,324	0/0:3,0:3:9:0,9,124	0/0:17,0:5:9.02:0,9,124	0/0:37,0:12:9.04:0,9,222	0/0:12,0:9:18.02:0,18,264	0/0:20,0:14:25.81:0,26,356	0/0:6,0:5:9.03:0,9,147	0/1:10,0:5:46.52:72,0,47	0/0:14,0:9:20.02:0,20,328	1/1:8,9:17:47.92:478,48,0	0/1:3,4:7:2.26:49,0,2	1/1:2,7:9:23.07:216,23,0	1/1:2,7:9:8.84:183,9,0	0/1:8,6:11:2.33:190,0,2	0/0:16,0:7:21.07:0,21,342	0/0:11,0:6:12.04:0,12,194	0/0:14,0:12:24.08:0,24,394	0/1:13,3:16:24.13:279,0,24	0/0:16,0:9:27.09:0,27,440	0/0:4,0:4:12.04:0,12,194	0/0:11,0:9:21.07:0,21,340	1/1:3,4:7:0.78:103,1,0	1/1:2,3:5:1.63:99,2,0	1/1:4,1:5:10.04:66,10,0	0/1:4,4:8:14:128,0,14	0/0:8,0:6:18.06:0,18,293	0/0:15,0:10:27.09:0,27,440	0/0:7,0:7:18.06:0,18,290
chr10	92439623	.	A	AAG	1535.17	PASS	AB=0.812;AC=19;AF=0.339;AN=56;BaseQRankSum=8.152;DP=338;FS=41.801;HRun=0;HaplotypeScore=101.0414;InbreedingCoeff=0.6083;MQ=45.85;MQ0=23;MQRankSum=-6.603;QD=13.47;ReadPosRankSum=1.738;VQSLOD=1.3919;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:9:21.05:0,21,322	0/0:3,0:3:6.02:0,6,103	0/0:15,0:4:9.03:0,9,133	0/0:36,0:12:0.74:0,1,224	0/0:12,0:9:20.97:0,21,283	0/0:21,0:15:26.78:0,27,384	0/0:6,0:5:9.03:0,9,147	0/1:11,0:6:16.74:17,0,48	0/0:14,0:9:21.96:0,22,344	1/1:9,9:17:39.91:422,40,0	1/1:1,4:7:5.17:65,5,0	1/1:3,7:9:5.55:193,6,0	1/1:3,7:9:11.04:179,11,0	1/1:4,6:11:25.16:219,25,0	0/0:17,0:8:21.07:0,21,342	0/0:11,0:6:12.04:0,12,200	0/0:14,0:12:24.08:0,24,397	0/1:11,3:16:29.15:202,0,29	0/0:16,0:9:27.09:0,27,434	0/0:4,0:4:12.04:0,12,196	0/0:11,0:9:21.07:0,21,342	1/1:3,4:7:3:120,3,0	1/1:2,3:5:10.61:123,11,0	0/1:4,1:6:11.50:37,0,11	1/1:3,4:8:19.90:149,20,0	0/0:8,0:6:18.06:0,18,295	0/0:15,0:10:27.09:0,27,440	0/0:7,0:7:18.06:0,18,290
chr10	92439624	.	G	GA	2491.79	PASS	AB=0.896;AC=19;AF=0.339;AN=56;BaseQRankSum=8.014;DP=340;FS=40.603;HRun=2;HaplotypeScore=93.1368;InbreedingCoeff=0.6740;MQ=45.73;MQ0=23;MQRankSum=-7.713;QD=21.67;ReadPosRankSum=2.187;VQSLOD=1.4010;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:8:18.06:0,18,239	0/0:4,0:3:6.02:0,6,83	0/0:16,0:4:9:0,9,116	0/0:37,0:14:5.81:0,6,131	0/0:12,0:9:21.07:0,21,263	0/0:21,0:15:26.96:0,27,306	0/0:6,0:5:9.03:0,9,117	0/1:9,3:6:32.29:119,0,32	0/0:13,0:9:6.68:0,7,255	1/1:14,4:17:50.83:566,51,0	1/1:7,0:7:12.37:90,12,0	1/1:11,0:9:5.10:279,5,0	1/1:10,0:9:21.46:285,21,0	1/1:14,0:11:33.01:350,33,0	0/0:17,0:8:21.07:0,21,273	0/0:11,0:6:12.04:0,12,158	0/0:14,0:12:24.08:0,24,317	0/1:14,2:16:44.74:346,0,45	0/0:16,0:9:27.09:0,27,350	0/0:4,0:4:12.04:0,12,156	0/0:11,0:9:21.07:0,21,272	1/1:7,0:7:13.75:175,14,0	1/1:5,0:5:11.45:97,11,0	0/1:7,0:7:4.96:125,0,5	1/1:6,2:8:20.97:259,21,0	0/0:8,0:6:18.05:0,18,226	0/0:15,0:10:27.09:0,27,350	0/0:7,0:7:18.03:0,18,217
chr10	92439632	.	A	AG	3064.03	PASS	AB=0.685;AC=19;AF=0.339;AN=56;BaseQRankSum=7.694;DP=371;FS=27.483;HRun=1;HaplotypeScore=90.4873;InbreedingCoeff=0.7074;MQ=38.57;MQ0=27;MQRankSum=-7.624;QD=24.91;ReadPosRankSum=1.637;VQSLOD=2.1753;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:7:18.06:0,18,238	0/0:4,0:3:6.02:0,6,83	0/0:23,0:8:8.67:0,9,149	0/0:46,0:10:17.82:0,18,191	0/0:11,0:8:21.07:0,21,272	0/0:20,0:14:24.01:0,24,281	0/0:9,0:7:11.99:0,12,135	0/1:5,4:4:26.94:95,0,27	0/0:13,0:8:18.02:0,18,219	1/1:2,14:15:42.11:586,42,0	1/1:1,9:10:23.66:296,24,0	1/1:1,14:9:27.08:358,27,0	1/1:3,9:11:24.90:311,25,0	1/1:2,12:11:33.10:440,33,0	0/0:19,0:8:21.03:0,21,253	0/0:13,0:8:13.29:0,13,161	0/0:15,0:12:24.08:0,24,317	0/1:9,7:16:35.55:317,0,36	0/0:13,0:7:18.06:0,18,234	0/0:5,0:4:12.04:0,12,156	0/0:11,0:9:21.07:0,21,272	1/1:2,7:8:21.07:276,21,0	1/1:1,5:6:15.05:215,15,0	0/1:4,4:7:98.59:140,0,99	1/1:1,7:8:18.05:236,18,0	0/0:8,0:6:12.04:0,12,161	0/0:18,0:11:27.09:0,27,350	0/0:7,0:7:15.05:0,15,195
chr10	92439648	.	GGAA	G	4789.59	PASS	AB=0.925;AC=50;AF=0.893;AN=56;BaseQRankSum=2.152;DP=394;FS=19.264;HRun=0;HaplotypeScore=94.6756;InbreedingCoeff=0.4114;MQ=37.79;MQ0=32;MQRankSum=-0.559;QD=15.50;ReadPosRankSum=2.143;VQSLOD=2.8983;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,5:6:6.02:78,6,0	1/1:4,0:3:6:66,6,0	0/0:28,0:8:8.01:0,8,291	0/0:57,0:13:19.39:0,19,444	1/1:2,10:9:8.79:139,9,0	1/1:14,1:9:12.45:154,12,0	1/1:9,1:6:5.49:76,5,0	1/1:9,3:7:14.99:182,15,0	1/1:3,11:8:9.03:137,9,0	1/1:10,5:14:24.68:332,25,0	1/1:9,2:10:15:192,15,0	1/1:14,5:13:12.48:233,12,0	1/1:8,6:11:26.92:263,27,0	1/1:11,3:10:23.97:245,24,0	1/1:17,5:10:27.54:354,28,0	1/1:10,5:10:15.03:180,15,0	1/1:8,5:10:20.21:318,20,0	0/1:14,3:17:15.11:224,0,15	1/1:5,6:7:17.99:194,18,0	1/1:0,4:3:9.03:134,9,0	1/1:3,10:10:18.06:257,18,0	1/1:6,3:8:14.93:149,15,0	1/1:7,1:6:5.82:88,6,0	0/1:8,0:7:45.97:46,0,121	1/1:4,4:8:18.05:224,18,0	1/1:5,4:7:15.01:205,15,0	1/1:3,13:9:15.05:227,15,0	1/1:1,4:6:6.02:92,6,0
chr10	92439653	.	A	AGG	2276.65	PASS	AB=0.870;AC=45;AF=0.804;AN=56;BaseQRankSum=1.162;DP=379;FS=2.722;HRun=1;HaplotypeScore=92.1961;InbreedingCoeff=0.1334;MQ=37.14;MQ0=38;MQRankSum=0.743;QD=7.72;ReadPosRankSum=3.660;VQSLOD=0.7814;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,3:6:5.98:53,6,0	1/1:2,2:3:5.03:30,5,0	0/0:28,0:8:21.03:0,21,298	0/0:56,0:13:24.10:0,24,380	1/1:11,0:8:12:77,12,0	1/1:4,10:8:18.03:191,18,0	0/1:7,5:7:5.40:58,0,5	0/1:10,0:7:3.88:74,0,4	1/1:13,0:7:5.85:20,6,0	1/1:11,1:11:25.72:174,26,0	1/1:4,4:7:6.95:77,7,0	1/1:11,7:11:12.77:93,13,0	0/1:12,2:11:8.87:43,0,9	1/1:7,5:8:19.23:170,19,0	1/1:9,14:11:29.60:350,30,0	1/1:6,9:10:10.53:134,11,0	1/1:12,1:10:14.20:183,14,0	0/1:13,3:16:23.23:125,0,23	0/1:10,0:6:21.62:60,0,22	1/1:4,0:3:6.78:38,7,0	1/1:11,1:9:13.04:74,13,0	1/1:7,3:7:6.12:57,6,0	1/1:3,2:3:5.93:52,6,0	0/1:7,3:8:22.32:22,0,130	1/1:5,4:8:15.87:114,16,0	0/1:8,1:7:21.08:54,0,21	1/1:13,1:7:12.63:93,13,0	1/1:7,0:6:4.74:16,5,0
chr10	92439654	.	A	AG	1382.76	PASS	AB=0.854;AC=34;AF=0.607;AN=56;BaseQRankSum=1.585;DP=404;FS=0.622;HRun=1;HaplotypeScore=97.5196;InbreedingCoeff=0.1283;MQ=36.68;MQ0=39;MQRankSum=-3.790;QD=4.77;ReadPosRankSum=1.907;VQSLOD=0.4483;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,3:7:4.50:16,4,0	0/1:2,2:3:2.74:3,0,4	0/0:27,0:8:20.89:0,21,237	0/0:56,0:13:28.53:0,29,323	0/0:11,0:8:0.18:0,0,21	0/1:5,10:9:14.49:58,0,14	1/1:8,5:8:7.24:37,7,0	0/1:16,0:13:2.97:109,0,3	0/0:13,0:7:7.23:0,7,25	0/1:14,1:14:4.92:66,0,5	1/1:6,4:9:13.04:101,13,0	1/1:9,9:11:3.97:86,4,0	0/1:13,2:12:11.61:26,0,12	1/1:9,5:10:13.84:102,14,0	1/1:9,14:11:4.04:158,4,0	1/1:8,9:11:16.42:103,16,0	1/1:13,2:12:22.58:130,23,0	1/1:12,4:16:17.44:244,17,0	0/1:9,1:6:32.95:44,0,33	0/1:4,0:3:3.35:3,0,8	0/1:11,1:9:0.66:1,0,18	1/1:9,3:9:4.91:87,5,0	1/1:4,2:4:8.10:40,8,0	0/1:8,3:9:68.30:68,0,99	0/1:6,4:9:6.12:34,0,6	0/1:8,1:7:9.95:10,0,68	0/1:13,1:7:1.15:19,0,1	0/0:7,0:6:4.74:0,5,16
chr10	92439963	.	T	TG	2373.57	PASS	AC=28;AF=0.519;AN=54;BaseQRankSum=-5.462;DP=256;FS=2.039;HRun=7;HaplotypeScore=32.6846;InbreedingCoeff=0.8089;MQ=82.17;MQ0=1;MQRankSum=-3.142;QD=17.45;ReadPosRankSum=0.825;VQSLOD=2.7193;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:33.04:0,33,318	1/1:1,0:1:1.82:5,2,0	0/0:14,0:12:29.73:0,30,263	0/0:18,0:17:14.11:0,14,325	1/1:0,3:3:4.26:39,4,0	1/1:2,8:10:9.03:108,9,0	1/1:4,12:16:33.10:399,33,0	0/0:18,0:18:23.89:0,24,210	1/1:2,3:5:9.03:109,9,0	0/0:3,0:3:3:0,3,29	0/0:2,0:2:6.01:0,6,58	0/0:6,0:6:12.02:0,12,115	0/0:2,0:2:6.01:0,6,57	0/0:6,0:6:12.01:0,12,112	1/1:3,14:17:15.05:182,15,0	1/1:2,8:10:13.59:149,14,0	1/1:1,24:25:51.16:616,51,0	0/0:15,0:15:36.05:0,36,347	1/1:1,5:6:15.02:157,15,0	1/1:0,2:2:5.98:56,6,0	1/1:8,8:16:21.06:250,21,0	./.	0/0:1,0:1:3:0,3,29	0/0:11,0:11:33.05:0,33,315	0/0:6,0:6:15.02:0,15,145	1/1:2,3:5:9.03:109,9,0	1/1:3,10:13:21.06:254,21,0	1/1:1,6:7:12.04:145,12,0
chr10	92440343	.	A	AC	6313.04	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-5.717;DP=584;FS=4.190;HRun=7;HaplotypeScore=90.5111;InbreedingCoeff=0.9127;MQ=79.08;MQ0=0;MQRankSum=-2.490;QD=18.41;ReadPosRankSum=3.462;VQSLOD=4.6409;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,33:37:84.26:1011,84,0	1/1:1,4:5:9.03:108,9,0	0/1:34,0:33:18.66:19,0,501	0/0:23,0:19:20.07:0,20,331	1/1:4,0:25:60.25:309,60,0	1/1:2,18:20:42.13:507,42,0	1/1:5,26:31:72.22:869,72,0	0/0:30,0:31:73.97:0,74,678	1/1:2,0:19:40.16:205,40,0	0/0:15,0:15:42.05:0,42,405	0/0:10,0:10:30.02:0,30,281	0/0:26,0:26:78.10:0,78,743	0/0:22,0:22:63.09:0,63,602	0/0:31,0:31:84.08:0,84,797	1/1:2,19:21:48.15:580,48,0	1/1:0,21:21:60.18:725,60,0	1/1:3,34:37:55.28:950,55,0	0/0:15,1:16:11.84:0,12,398	1/1:6,1:18:31.47:157,31,0	1/1:3,0:12:26.03:142,26,0	1/1:5,3:24:37.74:255,38,0	0/0:6,0:6:15.01:0,15,145	0/0:14,0:14:36.03:0,36,347	0/0:23,0:23:60.08:0,60,579	0/0:24,0:24:69.09:0,69,666	1/1:2,1:12:31.56:179,32,0	1/1:1,1:14:25.96:153,26,0	1/1:1,1:13:28.75:146,29,0
chr10	92440838	.	AG	A	8056.09	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=18.740;DP=607;FS=1.794;HRun=2;HaplotypeScore=79.6717;InbreedingCoeff=0.9947;MQ=83.54;MQ0=0;MQRankSum=-1.780;QD=34.43;ReadPosRankSum=3.790;VQSLOD=5.3106;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.25:0,81,1191	0/0:10,0:10:30.10:0,30,450	0/0:16,0:16:43.93:0,44,573	0/0:18,0:18:37.67:0,38,521	0/0:8,0:8:24.08:0,24,355	0/0:17,0:17:51.17:0,51,761	0/0:40,0:40:99:0,111,1644	1/1:0,22:22:63.16:772,63,0	0/0:23,0:23:69.23:0,69,1033	1/1:1,17:18:51.17:662,51,0	1/1:0,6:6:18.06:228,18,0	1/1:2,42:44:99:1544,120,0	1/1:2,25:27:72.20:900,72,0	1/1:1,27:28:72.23:925,72,0	0/0:20,0:20:60.20:0,60,899	0/0:20,0:20:60.18:0,60,855	0/0:35,0:35:99:0,102,1506	1/1:1,20:21:18.27:730,18,0	0/0:23,0:23:69.23:0,69,1015	0/0:11,0:11:27.09:0,27,404	0/0:50,0:50:99:0,147,2178	1/1:0,11:11:27.07:350,27,0	1/1:0,6:6:18.06:234,18,0	1/1:1,32:33:84.27:1090,84,0	1/1:0,18:18:48.16:622,48,0	0/0:24,1:25:36.32:0,36,1014	0/0:24,0:24:72.23:0,72,1050	0/0:6,0:6:18.06:0,18,270
chr10	92442841	.	CGTGTGTGT	C	4397.86	PASS	AB=0.812;AC=25;AF=0.463;AN=54;BaseQRankSum=4.831;DP=622;FS=7.076;HRun=0;HaplotypeScore=171.1712;InbreedingCoeff=0.4821;MQ=63.23;MQ0=6;MQRankSum=-8.003;QD=13.25;ReadPosRankSum=0.527;VQSLOD=3.2347;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:28:9.84:10,0,101	1/1:6,0:10:6.91:114,7,0	./.	0/0:18,0:12:3.01:0,3,39	0/1:22,14:35:10.14:619,0,10	1/1:11,1:17:5.91:91,6,0	0/1:17,0:21:32.66:33,0,101	0/0:23,0:23:9.50:0,10,232	1/1:9,10:20:30:670,30,0	0/0:25,0:32:48.16:0,48,1603	0/0:9,0:17:9.02:0,9,252	0/0:11,0:20:27.09:0,27,922	0/0:8,0:20:21.07:0,21,629	0/0:11,0:22:21.07:0,21,751	1/1:13,0:25:37.37:666,37,0	1/1:14,0:24:27.88:152,28,0	1/1:17,0:22:6.02:112,6,0	0/0:15,0:20:18.06:0,18,639	1/1:19,3:20:4.05:174,4,0	1/1:11,6:18:18.06:408,18,0	1/1:13,8:20:3.01:47,3,0	0/0:10,0:16:6.53:0,7,249	0/0:20,0:28:14.13:0,14,364	0/0:13,0:24:21.07:0,21,700	0/0:10,0:17:9.03:0,9,304	0/1:18,5:24:98.93:449,0,99	1/1:14,11:25:29.96:680,30,0	0/1:15,1:18:29.34:174,0,29
chr10	92443088	.	A	AT	8610.07	PASS	AB=0.574;AC=48;AF=0.857;AN=56;BaseQRankSum=-7.078;DP=418;FS=6.330;HRun=9;HaplotypeScore=42.3358;InbreedingCoeff=0.6100;MQ=78.41;MQ0=0;MQRankSum=-1.078;QD=24.05;ReadPosRankSum=1.016;VQSLOD=5.4880;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:65.96:0,66,573	1/1:1,4:5:15.04:164,15,0	0/0:19,0:17:0.34:0,0,104	0/0:13,0:13:14.89:0,15,117	1/1:3,4:7:9.02:100,9,0	1/1:3,12:16:10.04:339,10,0	1/1:4,17:21:20.92:470,21,0	1/1:8,29:38:66.99:930,67,0	1/1:3,14:17:39.11:431,39,0	1/1:3,11:14:36.07:380,36,0	1/1:1,6:8:20.85:200,21,0	0/1:1,7:8:5:178,0,5	1/1:1,13:14:36.10:398,36,0	1/1:1,13:14:39.11:431,39,0	1/1:3,14:17:13.10:372,13,0	1/1:4,9:13:27.07:299,27,0	1/1:4,13:18:39.06:418,39,0	1/1:3,8:11:24.06:266,24,0	1/1:4,26:31:11.87:786,12,0	1/1:1,7:9:21.02:220,21,0	1/1:7,6:14:21.06:232,21,0	1/1:0,5:5:15.04:166,15,0	0/1:3,4:8:5.18:150,0,5	1/1:2,14:16:36.10:398,36,0	1/1:1,7:8:12.03:133,12,0	1/1:3,14:18:45.10:487,45,0	1/1:2,20:22:45.12:498,45,0	1/1:1,5:6:15.04:166,15,0
chr10	92443323	.	CACACAGACACAGACACAGACACAG	C	7700.49	PASS	AB=1.000;AC=35;AF=0.795;AN=44;BaseQRankSum=7.320;DP=340;FS=10.775;HRun=0;HaplotypeScore=176.1973;InbreedingCoeff=0.2771;MQ=66.21;MQ0=5;MQRankSum=-6.387;QD=30.80;ReadPosRankSum=4.561;VQSLOD=2.3161;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:2.98:0,3,21	1/1:2,0:2:3.01:147,3,0	0/1:17,0:16:2.51:3,0,1665	0/0:25,0:18:54.14:0,54,3295	./.	1/1:14,0:14:3.01:123,3,0	0/1:7,0:7:45.51:46,0,204	1/1:0,21:21:62.86:1088,63,0	1/1:12,0:12:6.02:226,6,0	1/1:0,11:11:30.07:1256,30,0	./.	1/1:1,10:12:12.04:517,12,0	1/1:0,10:10:3.01:144,3,0	1/1:1,12:13:6.02:369,6,0	./.	1/1:11,0:11:6.02:115,6,0	1/1:11,0:11:3.01:61,3,0	1/1:1,16:17:15.05:876,15,0	0/1:8,0:8:21.97:105,0,22	1/1:15,0:15:3.01:88,3,0	./.	1/1:0,4:4:6.02:387,6,0	./.	./.	1/1:2,13:15:6.02:387,6,0	1/1:22,1:23:20.29:1161,20,0	1/1:27,0:26:21.07:604,21,0	0/0:4,0:4:2.36:0,2,19
chr10	92443325	.	CACAGACACAGACACAGACACAG	C	7838.82	PASS	AB=1.000;AC=39;AF=0.886;AN=44;BaseQRankSum=7.221;DP=335;FS=14.310;HRun=0;HaplotypeScore=161.8845;InbreedingCoeff=0.3748;MQ=63.24;MQ0=8;MQRankSum=-5.869;QD=32.94;ReadPosRankSum=4.318;VQSLOD=3.0107;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:0.89:2,1,0	1/1:0,2:2:3.01:164,3,0	0/0:17,0:14:10.77:0,11,1418	0/0:26,0:18:53.92:0,54,2934	./.	1/1:2,12:14:3.01:160,3,0	0/1:6,0:6:99:105,0,183	1/1:21,0:21:62.64:821,63,0	1/1:12,0:12:6.02:259,6,0	1/1:11,0:11:29.97:1071,30,0	./.	1/1:11,0:11:12.04:446,12,0	1/1:10,0:10:3.01:127,3,0	1/1:13,0:13:6.02:323,6,0	./.	1/1:2,9:11:6.02:186,6,0	1/1:1,10:11:3.01:78,3,0	1/1:17,0:17:15.05:779,15,0	1/1:6,0:6:10.73:187,11,0	1/1:15,0:15:3.01:124,3,0	./.	1/1:4,0:4:6.02:331,6,0	./.	./.	1/1:14,0:14:6.02:331,6,0	1/1:23,0:23:55.79:1484,56,0	1/1:26,0:25:21.07:801,21,0	1/1:4,0:4:8.35:61,8,0
chr10	92443327	.	CAG	C	2004.31	PASS	AC=36;AF=0.818;AN=44;BaseQRankSum=6.479;DP=330;FS=12.475;HRun=0;HaplotypeScore=106.4082;InbreedingCoeff=0.5366;MQ=61.62;MQ0=11;MQRankSum=-6.211;QD=9.32;ReadPosRankSum=4.639;VQSLOD=2.6065;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,2:7:2.99:24,3,0	1/1:2,0:2:1.55:4,2,0	0/0:17,0:13:39:0,39,636	0/0:28,0:18:53.74:0,54,902	./.	1/1:14,0:14:0.89:2,1,0	0/0:6,0:6:0.03:0,0,20	1/1:21,0:21:41.73:322,42,0	1/1:0,5:12:5.95:50,6,0	1/1:11,0:11:30:307,30,0	./.	1/1:11,0:11:11.68:67,12,0	1/1:10,0:10:2.94:18,3,0	1/1:12,0:12:6.01:61,6,0	./.	1/1:11,0:11:1.77:4,2,0	0/0:11,0:11:2.80:0,3,13	1/1:16,0:16:14.99:157,15,0	1/1:6,0:6:17.80:163,18,0	1/1:0,15:15:3.01:34,3,0	./.	1/1:4,0:4:6:51,6,0	./.	./.	1/1:13,0:13:6:52,6,0	1/1:10,10:20:56.90:552,57,0	1/1:1,11:25:21.02:209,21,0	1/1:4,0:4:6.89:56,7,0
chr10	92443331	.	CACAGACACAGACACAG	C	5411.26	PASS	AB=1.000;AC=38;AF=0.864;AN=44;BaseQRankSum=4.870;DP=327;FS=12.711;HRun=0;HaplotypeScore=139.0429;InbreedingCoeff=0.3204;MQ=58.28;MQ0=16;MQRankSum=-6.772;QD=23.94;ReadPosRankSum=3.995;VQSLOD=3.1633;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,1:7:2.99:23,3,0	1/1:2,0:2:3.01:98,3,0	0/0:17,0:12:25:0,25,815	0/0:31,0:17:38.20:0,38,2035	./.	1/1:13,0:13:3.01:94,3,0	0/1:4,0:5:2.56:3,0,128	0/1:21,0:21:65.57:114,0,66	1/1:9,3:12:6.02:235,6,0	1/1:11,0:11:17.75:581,18,0	./.	1/1:11,0:11:2.55:199,3,0	1/1:10,0:10:3.01:65,3,0	1/1:12,0:12:6.02:208,6,0	./.	1/1:11,0:11:6.02:160,6,0	1/1:10,0:10:2.68:11,3,0	1/1:16,0:16:15.05:473,15,0	1/1:5,0:5:14.92:186,15,0	1/1:7,8:15:3.01:124,3,0	./.	1/1:4,0:4:6.02:225,6,0	./.	./.	1/1:13,0:13:6.02:225,6,0	1/1:12,7:19:53.75:1477,54,0	1/1:16,9:25:21.07:874,21,0	1/1:4,0:4:5.91:38,6,0
chr10	92443333	.	CAGACACAGACACAG	C	4677.98	PASS	AB=1.000;AC=34;AF=0.773;AN=44;BaseQRankSum=4.585;DP=326;FS=10.891;HRun=0;HaplotypeScore=131.4111;InbreedingCoeff=0.3632;MQ=54.45;MQ0=22;MQRankSum=-6.202;QD=22.38;ReadPosRankSum=3.777;VQSLOD=3.1291;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:2.99:23,3,0	1/1:2,0:2:3.01:84,3,0	0/0:20,0:12:29.07:0,29,962	0/0:32,0:15:38.30:0,38,2095	./.	1/1:13,0:13:3.01:80,3,0	0/0:4,0:4:4.24:0,4,105	0/1:21,0:21:96.83:171,0,97	1/1:10,2:12:6.02:202,6,0	1/1:11,0:11:16.29:490,16,0	./.	0/1:11,0:11:10.34:155,0,10	1/1:10,0:10:3.01:51,3,0	1/1:12,0:12:6.02:182,6,0	./.	1/1:11,0:11:6.02:145,6,0	0/0:10,0:10:0.89:0,1,2	1/1:16,0:16:15.01:408,15,0	1/1:5,0:5:14.79:141,15,0	1/1:15,0:15:3.01:107,3,0	./.	1/1:4,0:4:6.02:198,6,0	./.	./.	1/1:13,0:13:6.02:199,6,0	1/1:18,1:19:51.55:1238,52,0	1/1:23,2:25:21.07:766,21,0	1/1:4,0:4:5.90:37,6,0
chr10	92443347	.	GAC	G	415.89	PASS	AB=1.000;AC=25;AF=0.625;AN=40;BaseQRankSum=5.336;DP=340;FS=41.369;HRun=0;HaplotypeScore=110.3958;InbreedingCoeff=0.3965;MQ=42.37;MQ0=36;MQRankSum=-4.973;QD=2.26;ReadPosRankSum=5.316;VQSLOD=-0.1839;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,0:2:2.94:18,3,0	0/1:20,0:6:0.84:1,0,18	0/0:33,0:10:21.02:0,21,197	./.	1/1:12,0:13:2.94:18,3,0	0/0:6,0:6:2.86:0,3,20	0/0:22,0:21:0.89:0,1,3	1/1:12,0:12:5.72:30,6,0	1/1:11,0:11:12.83:66,13,0	./.	0/1:11,0:11:0:0,0,0	./.	1/1:12,0:12:5.69:30,6,0	./.	1/1:13,0:14:1.51:29,2,0	0/0:12,0:11:2.98:0,3,22	0/1:17,0:17:3.37:52,0,3	0/0:3,0:3:0:0,0,0	1/1:13,0:12:2.92:17,3,0	./.	1/1:4,0:4:5.49:25,5,0	./.	./.	1/1:13,0:13:5.49:25,5,0	1/1:16,0:16:25.33:127,25,0	1/1:26,0:26:19.69:98,20,0	0/0:4,0:3:3:0,3,26
chr10	92443380	.	AGAGAGAGAGAGAGAGAGAGAGT	A	1786.21	PASS	AB=1.000;AC=27;AF=0.540;AN=50;BaseQRankSum=-5.288;DP=330;FS=12.025;HRun=0;HaplotypeScore=172.0394;InbreedingCoeff=-0.0780;MQ=39.35;MQ0=24;MQRankSum=-0.582;QD=7.67;ReadPosRankSum=-4.484;VQSLOD=0.6062;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:51.72:52,0,355	0/0:2,0:2:3.01:0,3,125	0/0:10,0:1:3.01:0,3,50	0/0:20,0:2:6.02:0,6,118	./.	0/1:15,0:15:62.70:63,0,89	0/1:12,0:12:11.11:11,0,377	0/1:16,0:15:29.57:78,0,30	0/1:13,0:13:36.83:37,0,77	1/1:12,0:11:20.88:163,21,0	1/1:5,0:5:5.99:49,6,0	1/1:9,0:9:3:26,3,0	./.	1/1:12,1:13:6.02:303,6,0	0/1:16,0:16:18.89:19,0,93	0/1:16,0:16:22.78:23,0,808	0/1:16,0:15:0.61:1,0,603	0/1:20,0:20:97.95:247,0,98	0/1:10,0:10:21.67:22,0,1139	0/0:8,0:8:0.47:0,0,2	1/1:14,0:13:3:25,3,0	1/1:3,2:5:6.02:367,6,0	1/1:9,0:7:3:25,3,0	./.	1/1:7,2:9:8.98:415,9,0	0/0:18,0:18:25.96:0,26,1281	0/0:19,0:19:9.29:0,9,279	0/1:5,0:4:12.53:13,0,341
chr10	92443851	.	A	AAC	1922.02	PASS	AB=0.764;AC=33;AF=0.611;AN=54;BaseQRankSum=-3.995;DP=621;FS=0.000;HRun=0;HaplotypeScore=141.5108;InbreedingCoeff=-0.0028;MQ=43.33;MQ0=6;MQRankSum=0.481;QD=3.73;ReadPosRankSum=1.305;VQSLOD=2.7490;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,5:33:0:0,0,0	0/1:0,5:5:0:0,0,0	./.	0/0:20,0:17:11.94:0,12,113	0/0:3,0:20:5.21:0,5,20	0/1:7,6:13:26.18:43,0,26	1/1:16,5:21:3.01:49,3,0	0/1:23,6:25:25.79:132,0,26	1/1:9,0:25:2.84:14,3,0	1/1:10,19:29:57.15:883,57,0	0/1:7,12:19:27.72:43,0,28	1/1:11,9:20:3.01:32,3,0	0/1:7,11:18:19.09:43,0,19	1/1:9,13:22:3.01:49,3,0	1/1:15,21:35:3.01:49,3,0	0/0:18,20:38:1.90:0,2,6	0/1:13,10:24:36.76:162,0,37	0/1:7,9:16:75.97:218,0,76	0/1:12,0:19:0.91:1,0,67	0/0:2,0:11:2.60:0,3,10	0/1:33,0:39:0.24:0,0,0	1/1:9,16:25:3.01:50,3,0	1/1:8,14:22:3.01:50,3,0	0/1:22,17:39:0:2,0,0	1/1:4,5:9:6.02:98,6,0	0/1:9,0:30:3.81:109,0,4	0/1:3,0:14:6.50:6,0,8	1/1:2,0:7:2.98:22,3,0
chr10	92443857	.	C	CAG	675.26	PASS	AB=0.994;AC=18;AF=0.321;AN=56;BaseQRankSum=3.443;DP=531;FS=0.661;HRun=0;HaplotypeScore=131.4167;InbreedingCoeff=-0.1637;MQ=41.52;MQ0=6;MQRankSum=-2.533;QD=2.27;ReadPosRankSum=5.260;VQSLOD=2.2509;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:2.87:0,3,24	0/1:5,0:5:0:0,0,0	0/0:11,0:4:8.03:0,8,58	0/0:12,0:9:24.05:0,24,298	0/0:20,0:20:11.86:0,12,88	0/1:11,0:11:13.02:13,0,75	0/1:17,0:17:15.34:15,0,39	0/1:21,0:17:50.94:51,0,196	0/0:23,0:23:3.85:0,4,27	0/1:24,0:24:66.80:429,0,67	0/1:16,0:16:10.37:10,0,99	1/1:16,0:16:2.71:14,3,0	0/1:18,0:18:21.28:21,0,57	0/1:22,0:22:9.64:10,0,75	0/1:30,0:29:18.10:18,0,19	0/0:29,0:32:1.97:0,2,6	0/1:21,0:23:60.41:60,0,116	0/1:15,0:15:99:108,0,163	0/0:18,0:17:41.07:0,41,332	0/0:10,0:10:5.95:0,6,44	0/0:22,11:33:11.71:0,12,99	0/1:22,0:22:10.89:11,0,81	0/1:21,0:21:11.57:12,0,80	0/1:30,0:30:0:1,0,0	1/1:7,0:7:5.98:47,6,0	0/0:30,0:30:4.20:0,4,280	0/0:12,0:12:22:0,22,147	0/0:5,0:5:6.38:0,6,39
chr10	92443931	.	C	CATAT	592.96	PASS	AB=0.972;AC=23;AF=0.411;AN=56;BaseQRankSum=2.603;DP=711;FS=14.985;HRun=0;HaplotypeScore=525.0323;InbreedingCoeff=-0.3076;MQ=30.37;MQ0=5;MQRankSum=-1.797;QD=1.09;ReadPosRankSum=-4.487;VQSLOD=-0.3677;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:14.16:0,14,74	1/1:13,1:13:3.12:14,3,0	0/0:4,0:2:2.99:0,3,24	0/0:5,0:2:2.39:0,2,21	0/1:24,0:24:18.89:20,0,19	0/0:26,0:26:8.84:0,9,61	0/1:15,2:17:14.85:15,0,47	0/1:56,0:42:99:112,0,241	0/1:17,0:17:8.59:36,0,9	0/1:38,0:38:38.03:38,0,307	0/0:21,0:20:9.29:0,9,55	0/1:37,0:37:2.30:2,0,16	0/1:22,0:22:34.85:35,0,37	0/1:28,1:29:24.19:24,0,40	0/1:49,5:58:11.78:12,0,54	0/1:31,4:36:15.88:16,0,33	0/1:23,1:25:20.61:21,0,92	0/1:13,0:13:8.10:8,0,44	0/1:24,0:22:99:110,0,361	1/1:24,0:24:3.36:101,3,0	0/1:28,0:27:3.22:4,0,3	0/0:37,0:37:20.85:0,21,94	0/0:18,0:18:6.31:0,6,49	0/1:25,0:25:0.53:1,0,19	0/0:21,0:21:5.54:0,6,37	0/1:30,0:28:63.48:63,0,116	0/1:19,0:19:42.58:43,0,92	1/1:7,0:7:3.25:68,3,0
chr10	92443967	.	TACAA	T	7831.96	PASS	AB=0.852;AC=25;AF=0.446;AN=56;BaseQRankSum=17.288;DP=1239;FS=71.192;HRun=0;HaplotypeScore=773.4798;InbreedingCoeff=-0.8337;MQ=35.97;MQ0=21;MQRankSum=-7.723;QD=7.04;ReadPosRankSum=12.907;VQSLOD=-0.2410;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,15:40:99:379,0,234	0/1:12,4:15:99:104,0,275	0/0:36,0:11:27.09:0,27,599	0/0:45,0:12:30.02:0,30,574	0/1:39,8:47:99:124,0,767	0/1:23,10:35:99:313,0,275	0/1:30,8:35:99:207,0,451	0/1:61,12:57:99:560,0,798	0/1:30,6:36:99:267,0,447	0/1:60,8:67:99:539,0,1860	0/1:38,3:38:99:292,0,625	0/1:46,11:57:99:522,0,342	0/1:41,7:48:99:334,0,527	0/1:40,5:46:99:163,0,607	0/1:56,28:85:99:911,0,318	0/1:46,21:67:99:547,0,404	0/1:29,11:40:99:282,0,566	0/1:19,1:20:99:150,0,593	0/1:19,4:20:99:164,0,693	0/1:40,4:44:99:199,0,937	0/1:40,10:50:98.49:98,0,465	0/1:48,11:58:99:555,0,999	0/1:46,5:50:99:214,0,732	0/0:44,2:46:0.74:0,1,525	0/1:30,5:36:99:315,0,412	0/1:47,4:49:99:260,0,1334	0/1:24,5:30:99:267,0,444	0/1:9,0:9:67.06:67,0,164
chr10	92443977	.	CAGATAT	C	12179.32	PASS	AB=0.835;AC=25;AF=0.446;AN=56;BaseQRankSum=22.053;DP=1283;FS=82.840;HRun=0;HaplotypeScore=793.4931;InbreedingCoeff=-0.8251;MQ=37.00;MQ0=18;MQRankSum=-11.876;QD=10.69;ReadPosRankSum=8.868;VQSLOD=-0.3493;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,14:42:99:427,0,708	0/1:16,4:19:99:241,0,840	0/0:44,0:12:9.97:0,10,602	0/0:49,0:12:10.15:0,10,521	0/1:32,15:47:99:388,0,1313	0/1:32,4:37:99:368,0,673	0/1:30,8:37:99:145,0,998	0/1:39,5:39:99:375,0,1651	0/1:32,8:39:99:493,0,1118	0/1:58,14:73:99:1175,0,3327	0/1:31,12:41:99:595,0,1329	0/1:49,9:61:99:941,0,1167	0/1:35,11:50:99:759,0,1200	0/1:43,4:48:99:288,0,1370	0/1:70,20:89:99:1186,0,1137	0/1:57,11:69:99:652,0,1665	0/1:32,10:42:99:348,0,1367	0/1:13,3:20:99:284,0,843	0/1:18,3:18:99:210,0,1044	0/1:39,7:46:99:474,0,1583	0/1:38,9:47:99:195,0,951	0/1:50,11:65:99:689,0,2388	0/1:43,4:51:99:454,0,1213	0/0:43,7:50:8.01:0,8,1359	0/1:34,5:41:99:460,0,1346	0/1:50,5:54:99:407,0,2423	0/1:24,7:31:99:497,0,694	0/1:9,0:9:99:130,0,468
chr10	92444083	.	GAC	G	6537.74	PASS	AB=0.965;AC=40;AF=0.714;AN=56;BaseQRankSum=-8.022;DP=995;FS=3.079;HRun=0;HaplotypeScore=417.3566;InbreedingCoeff=0.2553;MQ=41.32;MQ0=28;MQRankSum=7.554;QD=7.98;ReadPosRankSum=7.714;VQSLOD=3.2768;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:2.46:0,2,16	1/1:8,0:8:20.26:137,20,0	0/0:45,0:15:35.91:0,36,469	0/0:75,0:24:49.78:0,50,739	0/1:39,1:40:14.88:15,0,63	1/1:21,0:21:20.85:176,21,0	1/1:34,0:33:8.82:219,9,0	1/1:41,0:37:33.54:385,34,0	0/0:37,0:37:43.96:0,44,232	1/1:46,0:45:62.95:656,63,0	1/1:32,0:32:44.18:365,44,0	1/1:49,0:49:57.22:462,57,0	1/1:20,0:20:33.83:279,34,0	1/1:34,0:34:27.10:244,27,0	1/1:46,0:46:46.31:347,46,0	1/1:36,0:36:57.92:449,58,0	1/1:35,0:33:23.07:409,23,0	1/1:28,0:28:32.77:313,33,0	0/1:17,3:17:99:159,0,131	0/1:34,1:36:49.14:49,0,160	0/1:41,1:39:69.12:134,0,69	1/1:40,0:38:47.31:338,47,0	1/1:39,0:40:37.95:360,38,0	1/1:57,0:54:62.78:528,63,0	0/1:40,0:39:22.90:235,0,23	0/1:39,2:39:99:140,0,292	0/1:23,0:23:93.49:121,0,93	0/1:9,0:9:17.92:18,0,71
chr10	92444085	.	C	CACAG	7621.40	PASS	AB=0.856;AC=36;AF=0.643;AN=56;BaseQRankSum=-6.799;DP=993;FS=69.336;HRun=0;HaplotypeScore=435.2681;InbreedingCoeff=-0.0460;MQ=40.80;MQ0=28;MQRankSum=11.151;QD=8.91;ReadPosRankSum=3.280;VQSLOD=1.1647;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,3:15:5.43:36,5,0	1/1:8,0:8:8.31:33,8,0	0/0:46,0:15:36:0,36,515	0/0:72,0:24:50.90:0,51,866	0/1:21,20:41:2.41:303,0,2	0/0:20,0:20:1.14:0,1,6	0/1:31,0:31:7.76:85,0,8	1/1:41,0:37:21.78:293,22,0	0/1:9,28:38:18.90:450,0,19	0/1:47,0:46:0.89:300,0,1	1/1:32,0:32:29.34:223,29,0	0/1:50,0:50:23.66:42,0,24	0/1:21,0:21:8.36:11,0,8	0/1:34,0:34:7.87:50,0,8	1/1:46,0:46:1.86:123,2,0	0/1:35,0:35:0.21:0,0,13	1/1:36,0:34:6.02:157,6,0	0/1:27,0:27:9.46:103,0,9	0/1:17,5:19:16.78:725,0,17	1/1:17,18:36:6.80:861,7,0	1/1:33,10:40:27.49:539,27,0	1/1:40,0:39:25.23:172,25,0	0/1:40,0:40:19.16:141,0,19	1/1:56,0:53:35.56:301,36,0	1/1:39,0:39:7.79:188,8,0	0/1:22,16:37:98.62:1353,0,99	0/1:11,12:24:3.82:732,0,4	0/1:4,5:9:5.86:399,0,6
chr10	92444091	.	CAG	C	14165.33	PASS	AB=0.992;AC=42;AF=0.750;AN=56;BaseQRankSum=-6.718;DP=962;FS=2.703;HRun=0;HaplotypeScore=371.1229;InbreedingCoeff=0.3650;MQ=41.54;MQ0=26;MQRankSum=5.094;QD=17.62;ReadPosRankSum=2.993;VQSLOD=4.3952;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:14:8.73:55,9,0	1/1:2,6:8:21.05:298,21,0	0/0:42,0:16:34.90:0,35,526	0/0:68,0:25:43.38:0,43,670	0/1:40,0:40:16.04:16,0,169	1/1:1,17:18:20.98:319,21,0	1/1:19,16:33:36.06:558,36,0	1/1:3,38:37:86.88:1035,87,0	0/0:38,0:38:19.93:0,20,283	1/1:21,27:47:99:1592,118,0	1/1:9,21:30:66.03:883,66,0	1/1:13,33:46:62.98:901,63,0	1/1:7,14:21:47.84:617,48,0	1/1:15,19:34:41.59:532,42,0	1/1:11,32:43:53.83:728,54,0	1/1:6,26:32:67.30:936,67,0	1/1:11,22:33:74.16:972,74,0	1/1:9,12:21:56.92:717,57,0	0/1:25,0:21:57.37:57,0,228	0/1:32,0:32:47.63:48,0,340	0/1:45,0:42:14.30:14,0,187	1/1:17,25:41:57.46:780,57,0	1/1:16,22:38:51.85:799,52,0	1/1:27,29:56:99:1318,104,0	1/1:21,14:34:75.04:818,75,0	0/1:40,2:40:99:114,0,547	0/1:24,0:24:59.23:59,0,176	0/0:9,0:9:0.24:0,0,122
chr10	92444154	.	A	AACAC	5805.50	PASS	AB=0.994;AC=37;AF=0.661;AN=56;BaseQRankSum=9.326;DP=734;FS=11.896;HRun=0;HaplotypeScore=320.1057;InbreedingCoeff=-0.2027;MQ=48.31;MQ0=6;MQRankSum=-7.418;QD=8.90;ReadPosRankSum=2.672;VQSLOD=2.5628;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:20.94:27,0,21	0/1:9,0:9:34.94:87,0,35	0/0:49,0:34:40.96:0,41,880	0/0:33,0:26:43.64:0,44,726	1/1:22,3:26:15.03:280,15,0	1/1:25,0:24:24:257,24,0	0/1:17,0:17:13:13,0,126	0/1:48,0:44:43.86:44,0,260	1/1:22,3:25:8.80:406,9,0	0/1:38,0:36:78.50:152,0,78	0/1:21,0:21:53.97:108,0,54	0/1:41,0:41:11.82:495,0,12	0/1:19,0:19:56.62:59,0,57	1/1:35,0:34:14.41:473,14,0	0/1:40,0:40:19.05:389,0,19	1/1:33,0:33:23.22:437,23,0	0/1:24,0:22:11.51:143,0,12	0/1:17,0:17:79.83:90,0,80	1/1:27,1:25:34.66:513,35,0	1/1:16,2:18:15.05:312,15,0	1/1:24,0:24:17.48:201,17,0	0/1:24,0:24:31.52:96,0,32	0/1:20,0:20:55.45:86,0,55	0/1:39,0:36:99:120,0,161	1/1:18,0:16:9.86:207,10,0	0/1:23,1:23:29.13:361,0,29	1/1:10,1:11:15.51:230,16,0	1/1:6,2:8:12.01:220,12,0
chr10	92444162	.	G	GAC	426.26	PASS	AB=0.926;AC=10;AF=0.179;AN=56;BaseQRankSum=12.246;DP=731;FS=0.642;HRun=0;HaplotypeScore=310.5006;InbreedingCoeff=-0.2323;MQ=46.47;MQ0=13;MQRankSum=-8.302;QD=2.08;ReadPosRankSum=5.296;VQSLOD=1.6300;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:22:3.04:3,0,178	0/1:10,0:9:3.10:3,0,37	0/0:51,0:31:28:0,28,965	0/0:37,0:28:25.79:0,26,791	0/1:27,1:27:33.77:69,0,34	0/0:27,0:26:7.75:0,8,103	0/0:17,0:17:14.26:0,14,212	0/0:48,0:44:99:0,119,1305	0/1:20,1:21:22.57:84,0,23	0/0:36,0:33:71.36:0,71,824	0/0:21,0:18:9.44:0,9,94	0/1:40,0:40:20.57:21,0,72	0/0:20,0:20:34.99:0,35,372	0/0:35,0:34:17.54:0,18,239	0/0:37,0:37:21.78:0,22,253	0/0:32,0:31:18.67:0,19,268	0/0:28,0:24:20.81:0,21,239	0/0:15,0:15:22.34:0,22,298	0/1:21,2:20:99:110,0,147	0/1:19,0:19:33.81:56,0,34	0/0:27,0:27:17.89:0,18,131	0/0:19,0:19:14:0,14,175	0/0:20,0:18:6.91:0,7,101	0/0:38,0:33:0.37:0,0,313	0/0:18,0:16:5.14:0,5,77	0/1:20,3:22:70.54:71,0,346	0/1:8,3:11:63.08:63,0,94	0/1:4,2:6:40.37:81,0,40
chr10	92444168	.	CAG	C	1354.84	PASS	AB=0.908;AC=21;AF=0.375;AN=56;BaseQRankSum=3.039;DP=736;FS=2.037;HRun=0;HaplotypeScore=294.2630;InbreedingCoeff=-0.5820;MQ=45.19;MQ0=13;MQRankSum=-4.196;QD=2.50;ReadPosRankSum=-1.643;VQSLOD=1.4865;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,3:25:14.28:14,0,182	0/0:9,1:9:12:0,12,130	0/0:51,0:28:39.60:0,40,1160	0/0:34,0:24:26.01:0,26,802	0/1:32,0:31:16.42:16,0,155	0/1:24,4:27:71.62:93,0,72	0/0:19,0:19:12.93:0,13,198	0/1:44,2:42:99:235,0,1364	0/0:22,0:22:5.41:0,5,217	0/1:29,8:34:99:107,0,1052	0/1:17,4:18:41.54:42,0,134	0/0:37,0:37:25.46:0,25,400	0/1:12,6:18:93.50:93,0,302	0/1:33,4:36:99:159,0,541	0/1:33,4:37:99:187,0,144	0/1:27,5:31:99:136,0,463	0/1:17,11:24:99:228,0,246	0/1:13,0:13:27.31:27,0,208	0/0:19,1:17:5.36:0,5,396	0/1:21,0:21:6.96:7,0,155	0/1:29,1:30:22.50:22,0,249	0/1:16,1:17:9.73:10,0,201	0/1:15,4:17:20.25:20,0,121	0/1:36,1:32:1.75:2,0,432	0/1:15,4:17:7.02:7,0,183	0/1:26,0:25:61.17:61,0,509	0/1:11,0:11:28.44:28,0,213	0/1:6,0:6:12.52:13,0,95
chr10	92444170	.	G	GAC	4726.62	PASS	AB=0.936;AC=29;AF=0.518;AN=56;BaseQRankSum=8.440;DP=744;FS=18.793;HRun=0;HaplotypeScore=284.8074;InbreedingCoeff=-0.6194;MQ=43.60;MQ0=13;MQRankSum=-5.781;QD=7.14;ReadPosRankSum=6.236;VQSLOD=3.0985;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,1:25:40.49:40,0,119	0/1:10,0:9:10.67:39,0,11	0/0:50,0:27:44.51:0,45,813	0/0:32,0:21:46.21:0,46,627	0/1:32,0:31:47.79:68,0,48	1/1:21,7:27:17.81:313,18,0	0/1:19,0:19:9.82:10,0,40	0/1:40,12:49:99:527,0,643	0/1:22,0:22:34.02:86,0,34	0/1:34,3:34:99:220,0,448	0/1:17,3:17:34.69:119,0,35	1/1:37,0:37:26.31:246,26,0	0/1:20,1:21:99:133,0,145	0/1:34,3:36:86.46:385,0,86	1/1:34,3:37:29.29:552,29,0	0/1:29,3:31:70.71:336,0,71	0/1:21,6:23:20.42:448,0,20	0/1:11,3:14:46.15:157,0,46	0/1:21,0:18:99:102,0,155	0/1:24,0:24:55.25:78,0,55	0/1:28,0:28:25.37:25,0,110	0/1:16,1:17:51.47:67,0,51	0/1:17,2:17:18.13:117,0,18	0/1:31,5:31:99:109,0,124	0/1:17,2:17:6.41:155,0,6	0/1:24,3:26:99:249,0,258	0/1:12,0:12:65.93:66,0,133	0/1:6,0:6:52.96:81,0,53
chr10	92444174	.	G	GACAGACAGACACAC	34195.40	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.183;DP=765;FS=2.910;HRun=0;HaplotypeScore=282.7713;InbreedingCoeff=0.6067;MQ=46.64;MQ0=13;MQRankSum=-4.204;QD=49.99;ReadPosRankSum=5.176;VQSLOD=4.0840;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:27:1.39:265,1,0	1/1:2,7:10:0.37:556,0,0	0/0:46,0:25:17.87:0,18,852	0/0:32,0:22:3.76:0,4,793	1/1:31,0:32:12.49:367,12,0	1/1:22,6:27:36.31:2192,36,0	1/1:1,14:22:3.01:210,3,0	1/1:54,0:50:99:2180,118,0	1/1:22,0:24:30.42:613,30,0	1/1:33,3:33:84.20:2399,84,0	1/1:21,2:20:18.04:750,18,0	1/1:5,30:46:50.96:3147,51,0	1/1:22,1:23:45.03:1229,45,0	1/1:24,13:37:75.64:3734,76,0	1/1:21,12:34:69.21:3509,69,0	1/1:22,10:32:66.16:3283,66,0	1/1:24,4:24:53.44:2201,53,0	1/1:11,2:13:29.95:846,30,0	1/1:22,0:20:20.17:548,20,0	1/1:23,0:25:14.53:426,15,0	1/1:27,0:27:9.20:137,9,0	1/1:14,2:17:18.53:806,19,0	1/1:16,3:17:18.04:771,18,0	1/1:24,7:28:24.04:685,24,0	1/1:14,6:18:29.61:1547,30,0	1/1:26,0:26:51.66:1073,52,0	1/1:11,0:12:16.05:315,16,0	1/1:4,0:6:13.24:410,13,0
chr10	92445512	.	AGT	A	6264.99	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.623;DP=747;FS=1.081;HRun=0;HaplotypeScore=91.6089;InbreedingCoeff=0.9996;MQ=84.50;MQ0=0;MQRankSum=-1.454;QD=38.20;ReadPosRankSum=0.713;VQSLOD=6.8661;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,160,2927	0/0:13,0:13:36.12:0,36,662	0/0:27,0:26:75.25:0,75,1333	0/0:26,0:24:39.20:0,39,906	1/1:0,16:16:39.13:574,39,0	0/0:26,0:26:75.24:0,75,1365	0/0:22,0:22:63.22:0,63,1172	0/0:26,0:26:78.25:0,78,1418	1/1:0,24:24:60.20:884,60,0	0/0:36,0:36:99:0,108,2011	0/0:27,0:27:72.25:0,72,1340	0/0:28,0:28:81.28:0,81,1509	0/0:25,0:25:75.26:0,75,1396	0/0:36,0:36:99:0,105,1939	0/0:28,0:28:84.29:0,84,1558	0/0:35,1:36:64.17:0,64,1869	0/0:42,0:42:99:0,123,2245	0/0:30,0:30:84.29:0,84,1559	1/1:1,20:21:60.20:876,60,0	1/1:0,14:14:42.14:618,42,0	1/1:1,39:40:93.31:1370,93,0	0/0:21,0:21:60.21:0,60,1124	0/0:32,0:32:78.27:0,78,1422	0/0:32,0:32:93.32:0,93,1742	0/0:14,0:14:42.14:0,42,786	1/1:2,20:22:60.20:882,60,0	1/1:0,17:18:48.16:707,48,0	1/1:0,9:9:24.08:353,24,0
chr10	92445898	.	T	TTTTCTTTC	4087.22	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=-5.737;DP=564;FS=29.078;HRun=0;HaplotypeScore=214.6915;InbreedingCoeff=0.7277;MQ=54.18;MQ0=20;MQRankSum=-0.418;QD=20.85;ReadPosRankSum=0.986;VQSLOD=1.7858;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:43.07:0,43,582	0/0:8,0:8:18.06:0,18,324	0/0:47,0:17:16.66:0,17,311	0/0:52,0:16:17.33:0,17,203	1/1:14,9:23:11.75:281,12,0	0/0:17,0:16:15.34:0,15,293	0/0:13,0:12:15.86:0,16,167	0/0:23,0:22:35.86:0,36,482	1/1:16,0:16:20.47:464,20,0	0/0:22,0:21:37.67:0,38,583	0/0:10,0:10:9.99:0,10,158	0/0:14,0:14:3.64:0,4,28	0/0:11,0:11:16.17:0,16,236	0/0:14,0:14:2.78:0,3,71	0/0:17,0:17:1.91:0,2,372	0/0:20,0:20:37.14:0,37,423	0/1:13,0:12:0.15:0,0,160	0/0:19,0:16:7.16:0,7,318	1/1:34,0:31:17.01:730,17,0	1/1:24,0:24:26.25:473,26,0	1/1:16,0:15:26.91:347,27,0	0/0:23,0:23:33.17:0,33,474	0/0:21,0:21:23.84:0,24,356	0/1:11,0:9:25.21:25,0,47	0/0:14,0:14:23.40:0,23,305	1/1:33,0:33:51.48:1245,51,0	1/1:14,0:11:23.34:414,23,0	1/1:10,0:10:2.97:109,3,0
chr10	92445902	.	C	CTTTCTTTCTT	4939.53	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=-3.513;DP=569;FS=58.422;HRun=0;HaplotypeScore=213.5698;InbreedingCoeff=0.3602;MQ=47.35;MQ0=20;MQRankSum=-5.590;QD=15.63;ReadPosRankSum=-4.571;VQSLOD=1.0433;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:22:33.75:0,34,551	0/0:8,0:9:19.22:0,19,327	0/0:42,0:14:16.62:0,17,323	0/0:47,0:12:17.89:0,18,220	1/1:24,0:22:23.99:331,24,0	0/0:15,0:16:2.32:0,2,289	0/1:11,0:12:23.23:23,0,101	0/0:18,0:20:26.78:0,27,428	1/1:17,0:17:11.82:402,12,0	0/0:19,0:21:37.22:0,37,540	0/0:8,0:11:11.80:0,12,176	1/1:16,0:16:5.93:53,6,0	0/1:12,0:13:4.71:5,0,163	0/1:14,0:14:31.88:33,0,32	0/1:15,0:17:16.48:16,0,337	0/1:18,0:20:21.48:21,0,280	0/1:11,0:12:13.63:14,0,126	0/1:15,0:13:39.89:40,0,256	1/1:35,0:32:64.94:1001,65,0	1/1:6,17:24:29.90:511,30,0	1/1:17,0:16:30.03:358,30,0	0/0:20,0:22:8.91:0,9,395	0/0:20,0:22:10.29:0,10,332	0/1:9,0:8:39.94:44,0,40	0/0:10,0:14:12.78:0,13,290	1/1:34,0:36:81.03:1523,81,0	1/1:12,0:10:24.92:417,25,0	1/1:6,6:17:5.26:147,5,0
chr10	92445989	.	ACTGAGCTAAATCCC	A	8672.65	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.743;DP=451;FS=0.516;HRun=0;HaplotypeScore=195.2008;InbreedingCoeff=0.9585;MQ=51.59;MQ0=2;MQRankSum=-11.168;QD=95.30;ReadPosRankSum=0.662;VQSLOD=4.4282;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:75.26:0,75,4793	1/1:3,2:5:12.04:518,12,0	0/0:6,0:2:6.02:0,6,381	0/0:7,0:6:18.06:0,18,1026	0/0:19,0:19:54.19:0,54,3826	1/1:1,17:18:42.14:1804,42,0	1/1:1,16:17:33.11:1426,33,0	0/0:16,0:15:42.14:0,42,2759	0/0:13,0:13:39.13:0,39,2623	0/0:18,0:18:54.19:0,54,3821	0/0:14,0:14:42.14:0,42,2861	0/0:20,0:20:60.21:0,60,4003	0/0:9,0:9:27.09:0,27,1808	0/0:21,0:21:54.14:0,54,3507	1/1:0,18:18:48.16:2073,48,0	1/1:2,16:18:45.15:1944,45,0	1/1:4,11:15:21.07:907,21,0	0/0:25,0:25:75.26:0,75,5235	0/0:17,0:15:42.14:0,42,2607	0/0:20,0:20:57.20:0,57,4025	0/0:20,0:20:54.19:0,54,3651	0/0:19,0:19:54.19:0,54,3773	0/0:16,0:15:39.13:0,39,2751	0/0:19,0:19:54.19:0,54,3704	0/0:11,0:11:30.10:0,30,1886	0/0:16,0:16:48.16:0,48,3281	0/0:19,0:19:57.16:0,57,3866	0/0:4,0:4:9.03:0,9,640
chr10	92446902	.	CT	C	10784.33	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=17.154;DP=759;FS=0.272;HRun=2;HaplotypeScore=70.2807;InbreedingCoeff=0.9994;MQ=78.38;MQ0=0;MQRankSum=-1.455;QD=37.06;ReadPosRankSum=2.759;VQSLOD=5.4960;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,1995	0/0:8,0:8:24.08:0,24,360	0/0:16,0:16:48.16:0,48,720	0/0:22,0:22:62.95:0,63,898	0/0:32,0:32:93.29:0,93,1355	0/0:20,0:20:57.19:0,57,854	0/0:30,0:30:90.27:0,90,1309	1/1:0,34:34:99:1325,102,0	0/0:18,0:18:54.18:0,54,808	1/1:1,35:36:99:1358,105,0	1/1:0,21:21:60.19:778,60,0	1/1:1,32:33:93.30:1208,93,0	1/1:2,19:21:54.18:701,54,0	1/1:0,29:29:75.24:974,75,0	0/0:33,0:33:96.32:0,96,1420	0/0:51,0:51:99:0,151,2244	0/0:29,0:29:81.25:0,81,1191	1/1:0,21:21:63.20:818,63,0	0/0:27,1:28:75.24:0,75,1103	0/0:26,0:26:75.25:0,75,1122	0/0:36,0:36:99:0,105,1513	1/1:1,16:17:48.16:623,48,0	1/1:0,20:20:60.20:779,60,0	1/1:0,32:32:93.30:1207,93,0	1/1:0,27:27:78.25:1013,78,0	0/0:43,2:45:57.50:0,58,1817	0/0:21,0:20:60.19:0,60,880	0/0:8,0:8:24.08:0,24,359
chr10	92448496	.	A	AACACACACAC	4319.36	PASS	AC=30;AF=0.600;AN=50;BaseQRankSum=-8.442;DP=590;FS=1.651;HRun=0;HaplotypeScore=206.2377;InbreedingCoeff=0.6904;MQ=58.45;MQ0=17;MQRankSum=3.214;QD=13.50;ReadPosRankSum=-3.159;VQSLOD=3.2542;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:35.94:436,36,0	1/1:9,0:9:9.03:165,9,0	./.	./.	./.	1/1:18,0:19:7.51:274,8,0	1/1:27,0:26:11.83:78,12,0	1/1:20,0:17:1.98:6,2,0	1/1:21,0:21:21.06:548,21,0	0/0:15,0:14:3.01:0,3,69	0/0:12,0:12:2.77:0,3,37	0/0:33,0:32:22.77:0,23,567	0/0:17,0:17:14.83:0,15,249	0/0:16,0:16:8.47:0,8,114	1/1:27,0:27:23.82:274,24,0	1/1:24,0:24:23.90:363,24,0	1/1:18,0:18:18.03:393,18,0	0/0:15,0:15:8.30:0,8,204	1/1:14,0:14:3.02:8,3,0	1/1:17,0:17:17.99:297,18,0	1/1:31,0:29:10.70:162,11,0	0/0:17,0:17:2.90:0,3,14	0/0:23,0:23:2.20:0,2,69	0/0:30,0:30:3.16:0,3,70	0/0:18,0:18:9.03:0,9,209	1/1:25,0:25:8.26:703,8,0	1/1:20,0:20:14.98:465,15,0	1/1:8,5:14:2.67:148,3,0
chr10	92448526	.	CACACACACAA	C	3950.78	PASS	AB=0.990;AC=23;AF=0.411;AN=56;BaseQRankSum=-2.243;DP=602;FS=3.217;HRun=0;HaplotypeScore=205.8367;InbreedingCoeff=0.0329;MQ=53.84;MQ0=15;MQRankSum=1.498;QD=9.64;ReadPosRankSum=-1.071;VQSLOD=2.6715;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:34:87.85:88,0,1286	0/1:13,0:13:92.83:93,0,321	0/0:22,0:14:32.21:0,32,368	0/0:20,0:13:25.36:0,25,359	0/0:11,0:11:18.03:0,18,298	0/1:24,0:24:99:113,0,940	0/1:23,0:21:99:140,0,379	0/1:25,0:21:29.95:273,0,30	0/0:18,0:18:42.01:0,42,1043	1/1:14,0:14:23.59:274,24,0	0/1:20,0:20:40.96:230,0,41	1/1:34,2:35:71.49:828,71,0	0/1:24,1:25:8.91:408,0,9	1/1:18,0:18:23.20:289,23,0	0/1:30,0:30:99:173,0,686	0/1:28,0:28:99:155,0,512	0/1:20,0:20:59.63:60,0,541	1/1:16,0:16:4.41:217,4,0	0/0:15,0:14:37.10:0,37,314	0/0:16,0:16:34.36:0,34,707	0/0:34,0:31:73.22:0,73,1342	0/1:16,1:17:57.11:131,0,57	1/1:19,2:21:17.74:174,18,0	0/1:28,1:29:44.41:190,0,44	0/1:16,0:16:4.59:118,0,5	0/0:30,0:28:39.75:0,40,2080	0/0:18,0:18:47.99:0,48,1067	0/0:8,0:8:5.38:0,5,225
chr10	92448528	.	CACACACAA	C	7157.66	PASS	AB=0.996;AC=29;AF=0.518;AN=56;BaseQRankSum=-3.731;DP=595;FS=2.589;HRun=0;HaplotypeScore=175.4529;InbreedingCoeff=0.3567;MQ=55.22;MQ0=13;MQRankSum=1.419;QD=16.45;ReadPosRankSum=-0.188;VQSLOD=4.3093;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:34:88.25:88,0,983	0/1:12,0:12:99:115,0,250	0/0:21,0:14:35.20:0,35,388	0/0:17,0:13:25.36:0,25,358	0/0:11,0:11:18.03:0,18,242	0/1:24,0:24:99:119,0,689	0/1:23,0:21:99:162,0,241	0/1:25,0:21:10.85:306,0,11	0/0:18,0:18:42:0,42,845	1/1:14,1:15:44.59:520,45,0	1/1:15,6:21:56.70:627,57,0	1/1:25,13:37:84.94:1567,85,0	1/1:21,4:25:56.06:783,56,0	1/1:15,5:20:45.03:610,45,0	0/1:29,0:29:99:176,0,478	0/1:28,0:28:99:179,0,382	0/1:19,0:19:62.59:63,0,388	1/1:12,3:15:30.46:504,30,0	0/0:15,0:14:33.29:0,33,235	0/0:18,0:18:40.34:0,40,644	0/0:34,0:31:73.20:0,73,1095	1/1:15,2:17:19.80:261,20,0	1/1:4,14:18:21.29:296,21,0	1/1:25,4:29:35.34:402,35,0	1/1:2,12:14:18.95:374,19,0	0/1:27,1:27:6.17:6,0,1607	0/0:18,0:18:47.95:0,48,836	0/0:8,0:8:5.71:0,6,186
chr10	92448536	.	A	ACAC	272.14	PASS	AB=0.958;AC=9;AF=0.161;AN=56;BaseQRankSum=2.513;DP=535;FS=5.165;HRun=0;HaplotypeScore=143.6924;InbreedingCoeff=-0.0521;MQ=62.26;MQ0=6;MQRankSum=-0.409;QD=1.67;ReadPosRankSum=-1.384;VQSLOD=1.7553;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:9.03:9,0,141	0/1:10,0:11:40.99:41,0,63	0/0:21,0:16:45.14:0,45,768	0/0:16,0:15:33.56:0,34,700	0/0:11,0:11:26.99:0,27,395	0/1:18,1:19:99:143,0,136	0/0:15,0:13:5.97:0,6,102	0/1:26,0:24:19.23:19,0,197	0/0:17,0:17:38.36:0,38,528	0/0:16,0:16:15.62:0,16,152	0/0:20,0:20:43.69:0,44,219	0/0:34,0:33:66.77:0,67,359	0/0:25,0:25:35.30:0,35,254	0/0:21,0:21:20.95:0,21,168	0/1:23,1:24:8.79:9,0,127	0/1:22,2:24:83.07:83,0,125	0/1:20,0:21:77.98:93,0,78	0/0:12,0:12:23:0,23,130	0/0:8,0:8:21.06:0,21,342	0/0:14,0:14:36.35:0,36,447	0/0:34,0:33:59.78:0,60,853	0/0:15,0:15:30.31:0,30,147	0/0:16,0:16:13.54:0,14,84	0/0:25,0:25:11.17:0,11,141	0/0:13,0:13:14.55:0,15,86	0/0:25,0:25:18.53:0,19,782	0/0:13,0:13:34.49:0,34,501	1/1:6,0:6:1.25:3,1,0
chr10	92448625	.	GGGATGGCACCCATGGCTGCA	G	45625.90	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=8.405;DP=512;FS=18.407;HRun=0;HaplotypeScore=283.7185;InbreedingCoeff=0.8461;MQ=77.90;MQ0=0;MQRankSum=-9.932;QD=96.26;ReadPosRankSum=6.911;VQSLOD=2.8308;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:54.07:2335,54,0	1/1:0,7:7:14.98:685,15,0	0/0:20,0:20:60.21:0,60,3650	0/0:18,0:18:51.15:0,51,3509	1/1:1,12:13:27.28:968,27,0	1/1:2,14:16:30.10:1666,30,0	1/1:3,16:19:18.05:863,18,0	1/1:4,12:16:36.11:1254,36,0	1/1:0,18:18:42.14:2393,42,0	1/1:2,18:20:51.16:2407,51,0	1/1:2,9:11:23.95:1042,24,0	1/1:1,39:40:75.26:4080,75,0	1/1:4,25:29:54.19:2980,54,0	1/1:3,19:22:39.13:2129,39,0	1/1:0,35:35:75.26:4249,75,0	1/1:1,28:29:57.20:3222,57,0	1/1:1,17:18:27.09:1356,27,0	1/1:2,10:12:12.04:686,12,0	1/1:1,7:8:18.06:712,18,0	1/1:0,16:16:32.90:1397,33,0	1/1:3,19:22:6.02:216,6,0	1/1:1,17:18:36.12:1839,36,0	1/1:0,4:4:6.02:260,6,0	1/1:0,15:15:18.06:843,18,0	1/1:1,14:15:36.12:1958,36,0	1/1:1,17:18:48.14:2137,48,0	1/1:1,26:27:63.64:3434,64,0	1/1:0,3:3:9.03:515,9,0
chr10	92448645	.	A	AG	5071.34	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=6.693;DP=591;FS=5.866;HRun=1;HaplotypeScore=339.4873;InbreedingCoeff=0.4220;MQ=79.38;MQ0=0;MQRankSum=-6.883;QD=9.39;ReadPosRankSum=-0.363;VQSLOD=2.2121;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:39.62:323,40,0	1/1:8,0:8:14.19:115,14,0	0/0:23,0:23:62.83:0,63,725	0/0:25,0:25:55.41:0,55,697	0/1:16,0:16:8.28:29,0,8	1/1:16,1:17:33.39:224,33,0	1/1:19,0:19:22.60:156,23,0	1/1:22,1:23:47.25:495,47,0	0/1:20,0:20:25.55:26,0,34	1/1:21,1:22:50.72:367,51,0	1/1:11,0:11:19.25:124,19,0	1/1:45,0:45:76.70:465,77,0	1/1:30,0:30:58.07:365,58,0	1/1:21,0:21:32.51:162,33,0	1/1:35,0:35:64:259,64,0	1/1:29,0:30:54.59:256,55,0	1/1:28,0:29:44.71:315,45,0	1/1:12,0:12:14.04:90,14,0	1/1:11,0:11:2.37:71,2,0	1/1:18,0:18:17.30:151,17,0	1/1:27,0:27:0.05:15,0,0	1/1:18,0:18:30.26:199,30,0	1/1:7,0:7:12.04:150,12,0	1/1:18,1:19:29.16:290,29,0	1/1:16,0:16:33.53:243,34,0	0/1:23,0:23:6.32:132,0,6	0/1:28,0:28:41.69:46,0,42	0/0:3,0:3:5.45:0,5,15
chr10	92449790	.	AGT	A	2986.61	PASS	AB=0.790;AC=43;AF=0.860;AN=50;BaseQRankSum=0.225;DP=656;FS=1.709;HRun=0;HaplotypeScore=92.8327;InbreedingCoeff=0.3519;MQ=66.46;MQ0=9;MQRankSum=-1.079;QD=5.47;ReadPosRankSum=1.121;VQSLOD=3.0791;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,12:34:6.02:66,6,0	0/1:6,2:10:29.45:49,0,29	./.	./.	./.	0/0:9,0:13:14.99:0,15,129	0/1:25,1:40:9.06:9,0,176	1/1:25,9:34:29.84:285,30,0	1/1:11,0:19:13.40:62,13,0	1/1:23,2:26:14.87:146,15,0	1/1:4,4:8:6.02:66,6,0	1/1:18,12:31:29.91:311,30,0	1/1:21,10:31:20.91:224,21,0	1/1:11,8:21:20.62:192,21,0	1/1:15,9:25:26.91:278,27,0	0/0:12,0:22:42.01:0,42,417	1/1:14,15:31:28.22:290,28,0	0/1:9,7:17:27.15:128,0,27	1/1:16,0:18:5.68:28,6,0	1/1:9,0:13:2.84:14,3,0	1/1:51,0:60:29.45:154,29,0	1/1:10,8:18:8.85:80,9,0	1/1:9,2:11:3:33,3,0	1/1:10,18:30:35.93:377,36,0	1/1:13,7:21:17.88:179,18,0	1/1:18,0:23:8.52:43,9,0	1/1:8,0:14:17.04:84,17,0	1/1:5,0:8:5.68:28,6,0
chr10	92450196	.	GC	G	2968.10	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.990;DP=255;FS=4.468;HRun=1;HaplotypeScore=43.6005;InbreedingCoeff=0.5665;MQ=62.05;MQ0=1;MQRankSum=0.601;QD=13.08;ReadPosRankSum=-1.850;VQSLOD=1.7593;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:10.16:50,10,0	1/1:3,0:3:5.96:44,6,0	0/0:11,1:7:11.07:0,11,82	0/0:15,1:8:12.59:0,13,98	1/1:5,0:5:1.55:4,2,0	1/1:9,0:9:23.71:181,24,0	1/1:12,4:16:37.66:337,38,0	1/1:7,0:6:14.91:111,15,0	1/1:6,0:6:14.74:105,15,0	1/1:5,1:6:14.61:94,15,0	1/1:4,0:4:5.91:38,6,0	1/1:20,0:20:43.60:276,44,0	1/1:7,0:7:11.61:72,12,0	1/1:7,0:7:20.67:148,21,0	1/1:8,0:8:20.62:139,21,0	1/1:9,2:11:29.89:287,30,0	1/1:21,1:22:8.90:63,9,0	1/1:13,0:13:8.80:54,9,0	1/1:7,0:7:13.50:98,13,0	1/1:2,1:3:8.86:93,9,0	1/1:14,3:16:2.96:19,3,0	1/1:3,0:3:8.99:75,9,0	1/1:4,0:4:11.84:94,12,0	1/1:17,0:17:46.98:334,47,0	1/1:2,1:3:5.97:61,6,0	1/1:7,0:7:20.84:170,21,0	1/1:6,0:6:16.48:122,16,0	1/1:2,0:2:3.44:21,3,0
chr10	92450201	.	G	GA	3507.88	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.034;DP=263;FS=4.708;HRun=1;HaplotypeScore=44.8533;InbreedingCoeff=0.5756;MQ=62.27;MQ0=1;MQRankSum=1.591;QD=14.99;ReadPosRankSum=-0.478;VQSLOD=2.9872;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:14:7.98:41,8,0	1/1:0,2:2:5.95:42,6,0	0/0:11,0:8:15.02:0,15,164	0/0:16,0:9:18.91:0,19,159	1/1:1,4:5:6.39:39,6,0	1/1:9,0:9:21.01:188,21,0	1/1:16,0:16:31.39:237,31,0	1/1:1,8:9:23.89:199,24,0	1/1:7,1:8:20.96:192,21,0	1/1:1,6:7:17.97:154,18,0	1/1:0,4:4:8.99:108,9,0	1/1:19,0:19:46.92:444,47,0	1/1:5,0:5:12.48:112,12,0	1/1:9,0:9:18.01:166,18,0	1/1:8,0:8:17.88:139,18,0	1/1:9,0:9:23.56:174,24,0	1/1:5,20:25:6.02:89,6,0	1/1:1,13:14:5.75:57,6,0	1/1:8,0:7:14.88:114,15,0	1/1:3,0:3:5.99:50,6,0	1/1:4,16:19:3.42:21,3,0	1/1:2,0:2:5.99:52,6,0	1/1:4,0:4:11.98:101,12,0	1/1:16,0:16:44.56:383,45,0	1/1:1,2:3:6.01:70,6,0	1/1:7,1:8:20.99:188,21,0	1/1:5,0:5:14.98:143,15,0	1/1:2,0:2:0.89:2,1,0
chr10	92450323	.	ATATAT	A	2699.57	PASS	AB=1.000;AC=21;AF=0.438;AN=48;BaseQRankSum=-4.107;DP=163;FS=1.631;HRun=0;HaplotypeScore=48.9959;InbreedingCoeff=0.6103;MQ=74.58;MQ0=9;MQRankSum=-4.471;QD=29.34;ReadPosRankSum=0.367;VQSLOD=3.0706;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:14:13.32:13,0,44	1/1:1,0:1:0.89:2,1,0	0/0:8,0:4:9.03:0,9,166	0/0:14,0:8:5.52:0,6,65	./.	0/0:4,0:3:7.25:0,7,103	0/0:3,0:3:5.51:0,6,64	1/1:16,12:27:78.17:1295,78,0	0/0:2,0:2:5.23:0,5,42	1/1:3,3:5:3.01:66,3,0	1/1:2,2:4:11.96:144,12,0	1/1:4,3:7:12.03:266,12,0	1/1:0,3:3:9.03:191,9,0	1/1:2,0:2:6:90,6,0	0/0:1,0:1:0.89:0,1,2	0/0:5,0:3:9.03:0,9,183	0/0:9,0:8:23.23:0,23,460	1/1:10,8:15:39.08:704,39,0	0/0:11,0:9:24.08:0,24,370	./.	0/0:2,0:2:6.02:0,6,124	./.	./.	1/1:0,3:3:3:28,3,0	1/1:0,3:3:2.64:66,3,0	0/0:5,0:5:15.05:0,15,196	0/0:3,0:3:8.24:0,8,72	0/0:3,0:3:9.03:0,9,115
chr10	92450325	.	ATAT	A	1637.44	PASS	AB=1.000;AC=23;AF=0.479;AN=48;BaseQRankSum=-0.606;DP=155;FS=0.000;HRun=0;HaplotypeScore=48.2423;InbreedingCoeff=0.5821;MQ=70.21;MQ0=10;MQRankSum=-4.624;QD=16.71;ReadPosRankSum=1.107;VQSLOD=2.9975;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,9:14:13.02:404,13,0	1/1:1,0:1:0.89:2,1,0	0/0:8,0:3:9.01:0,9,111	0/1:13,0:7:0.81:1,0,38	./.	0/0:4,0:3:4.26:0,4,52	0/0:3,0:3:5.50:0,6,47	1/1:27,0:26:77.95:702,78,0	0/0:2,0:2:4.44:0,4,14	1/1:4,0:3:3:29,3,0	1/1:4,0:4:10.19:71,10,0	1/1:6,0:6:12.01:116,12,0	1/1:3,0:3:8.99:79,9,0	1/1:1,0:1:3:29,3,0	0/0:1,0:1:0.89:0,1,2	0/0:5,0:3:9.01:0,9,95	0/0:9,0:8:23.17:0,23,305	1/1:16,0:14:35.86:307,36,0	0/0:12,0:10:20.07:0,20,142	./.	0/0:2,0:2:6.02:0,6,80	./.	./.	1/1:3,0:3:3:28,3,0	1/1:3,0:3:2.64:28,3,0	0/0:5,0:5:2.62:0,3,38	0/0:3,0:3:0.32:0,0,9	0/0:3,0:3:7.69:0,8,38
chr10	92450327	.	AT	A	888.32	PASS	AB=0.806;AC=31;AF=0.646;AN=48;BaseQRankSum=-0.598;DP=148;FS=11.677;HRun=8;HaplotypeScore=46.1565;InbreedingCoeff=0.5005;MQ=58.12;MQ0=11;MQRankSum=-1.506;QD=7.79;ReadPosRankSum=2.303;VQSLOD=0.1354;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,1:15:26:152,26,0	1/1:1,0:1:0.89:2,1,0	0/0:8,0:3:6.02:0,6,65	0/1:7,0:3:0.16:0,0,0	./.	0/0:2,0:2:4.83:0,5,19	0/0:3,0:3:5.45:0,5,28	1/1:17,10:26:64.16:440,64,0	0/1:1,0:2:1.34:1,0,3	1/1:4,0:3:2.88:15,3,0	1/1:4,0:4:5.77:34,6,0	1/1:5,0:5:11.59:66,12,0	1/1:3,0:3:7.97:37,8,0	1/1:1,0:1:2.98:21,3,0	0/0:2,0:2:5.12:0,5,20	0/0:5,0:3:1.82:0,2,5	0/0:9,0:9:19.21:0,19,88	1/1:13,3:13:27.36:154,27,0	1/1:7,0:9:0.13:11,0,0	./.	0/0:2,0:2:2.74:0,3,12	./.	./.	1/1:4,0:4:5.96:47,6,0	1/1:3,0:3:2.66:15,3,0	1/1:1,0:4:6.92:19,7,0	0/1:2,0:3:0.68:5,0,1	1/1:1,0:3:3.59:9,4,0
chr10	92450336	.	CT	C	1872.22	PASS	AC=42;AF=0.955;AN=44;BaseQRankSum=0.365;DP=145;FS=3.921;HRun=8;HaplotypeScore=37.5850;InbreedingCoeff=0.0792;MQ=44.38;MQ0=13;MQRankSum=1.413;QD=13.87;ReadPosRankSum=0.547;VQSLOD=2.6095;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:14:20.97:189,21,0	0/0:1,0:1:0:0,0,0	1/1:6,0:2:0.47:1,0,0	./.	./.	1/1:4,0:2:4.56:33,5,0	1/1:0,2:2:3:29,3,0	1/1:5,24:27:72.06:671,72,0	1/1:0,2:2:6.01:57,6,0	./.	1/1:0,2:2:2.97:21,3,0	1/1:2,4:6:15.01:139,15,0	1/1:1,2:3:6.01:56,6,0	./.	1/1:1,1:2:6:52,6,0	./.	1/1:10,1:9:2.51:90,3,0	1/1:12,7:16:17.99:169,18,0	1/1:5,6:9:14.98:141,15,0	1/1:0,1:1:3:29,3,0	1/1:0,2:2:3:29,3,0	1/1:1,0:1:2.99:24,3,0	./.	1/1:1,4:5:2.99:29,3,0	1/1:3,0:3:2.77:22,3,0	1/1:2,3:4:9.01:82,9,0	1/1:1,2:3:6:55,6,0	1/1:1,1:2:3:28,3,0
chr10	92450473	.	C	CATTTATTTATTTATTT	14880.45	PASS	AC=48;AF=0.960;AN=50;BaseQRankSum=0.442;DP=217;FS=0.000;HRun=0;HaplotypeScore=86.9609;InbreedingCoeff=0.1511;MQ=56.38;MQ0=0;MQRankSum=-1.216;QD=71.20;ReadPosRankSum=1.032;VQSLOD=4.4868;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:12:18.06:747,18,0	./.	0/0:5,0:5:2.96:0,3,19	./.	1/1:5,0:5:6.02:393,6,0	1/1:7,5:12:6.02:435,6,0	1/1:3,0:3:3.01:57,3,0	1/1:38,0:37:51.13:1938,51,0	1/1:4,1:5:9.03:503,9,0	1/1:4,0:4:9.03:609,9,0	1/1:3,0:3:3.01:106,3,0	1/1:7,1:8:12.04:666,12,0	1/1:4,0:4:6.02:379,6,0	1/1:2,0:2:3.01:190,3,0	1/1:1,1:2:3.01:227,3,0	1/1:4,0:4:3.01:149,3,0	1/1:13,5:18:21.07:1438,21,0	1/1:13,1:14:21.07:1128,21,0	1/1:19,5:24:27.09:1135,27,0	1/1:3,3:6:12.04:886,12,0	./.	1/1:0,2:2:6.02:455,6,0	1/1:0,1:1:3.01:227,3,0	1/1:3,0:3:3.01:79,3,0	1/1:6,1:7:9.03:495,9,0	1/1:3,5:9:20.90:910,21,0	1/1:13,1:15:15.05:1127,15,0	1/1:7,1:8:9.03:599,9,0
chr10	92451002	.	TCC	T	7080.32	PASS	AB=0.525;AC=15;AF=0.268;AN=56;BaseQRankSum=-5.634;DP=696;FS=6.842;HRun=4;HaplotypeScore=113.0101;InbreedingCoeff=0.8944;MQ=85.22;MQ0=0;MQRankSum=-6.797;QD=39.78;ReadPosRankSum=2.316;VQSLOD=3.7280;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,2356	0/0:11,0:11:33.11:0,33,606	0/0:28,0:28:78.19:0,78,1392	0/0:28,0:28:78.15:0,78,1249	1/1:0,15:15:39.13:573,39,0	0/0:23,0:23:66.23:0,66,1236	0/0:28,0:28:84.29:0,84,1573	0/0:39,0:39:99:0,102,1853	1/1:1,23:24:66.22:971,66,0	0/0:46,0:46:99:0,129,2403	0/0:14,0:14:39.13:0,39,707	0/0:32,0:32:90.25:0,90,1521	0/0:23,0:23:69.24:0,69,1277	0/0:28,0:28:81.27:0,81,1486	0/0:31,0:31:90.31:0,90,1677	0/0:17,1:17:7.01:0,7,855	0/0:35,0:35:93.32:0,93,1742	0/0:12,0:12:36.12:0,36,658	1/1:2,16:18:48.16:706,48,0	1/1:0,21:21:60.20:872,60,0	1/1:2,37:39:99:1501,102,0	0/0:28,0:28:84.26:0,84,1503	0/0:12,0:12:36.07:0,36,636	0/0:18,0:18:54.19:0,54,1010	0/0:21,0:21:57.20:0,57,1050	0/1:2,19:21:49.24:736,0,49	1/1:0,30:30:87.29:1279,87,0	1/1:0,10:10:30.10:442,30,0
chr10	92451993	.	GA	G	5740.49	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-8.904;DP=693;FS=4.002;HRun=2;HaplotypeScore=93.0629;InbreedingCoeff=0.9994;MQ=84.82;MQ0=0;MQRankSum=-2.380;QD=34.79;ReadPosRankSum=1.639;VQSLOD=5.2048;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,2107	0/0:11,0:11:33.10:0,33,476	0/0:26,0:26:72.19:0,72,983	0/0:22,0:22:63.21:0,63,939	1/1:1,20:21:60.15:751,60,0	0/0:21,0:21:63.20:0,63,925	0/0:32,0:32:96.30:0,96,1397	0/0:36,0:36:99:0,105,1504	1/1:1,21:22:54.18:701,54,0	0/0:23,0:23:66.22:0,66,965	0/0:21,0:21:62.86:0,63,889	0/0:36,0:36:99:0,105,1571	0/0:18,0:18:51.16:0,51,744	0/0:26,0:26:78.26:0,78,1150	0/0:32,0:31:96.31:0,96,1417	0/0:30,0:30:87.28:0,87,1283	0/0:39,0:39:99:0,117,1710	0/0:25,0:25:75.19:0,75,1077	1/1:0,8:8:24.05:282,24,0	1/1:0,15:15:42.14:545,42,0	1/1:0,34:34:87.28:1129,87,0	0/0:26,0:26:78.26:0,78,1169	0/0:23,0:23:60.20:0,60,899	0/0:17,0:17:51.17:0,51,764	0/0:15,0:15:42.14:0,42,628	1/1:1,28:29:84.27:1088,84,0	1/1:0,25:25:69.22:894,69,0	1/1:0,11:11:27.09:350,27,0
chr10	92452372	.	TA	T	4153.54	PASS	AB=0.867;AC=29;AF=0.518;AN=56;BaseQRankSum=8.385;DP=609;FS=18.169;HRun=13;HaplotypeScore=68.8148;InbreedingCoeff=0.7684;MQ=73.11;MQ0=1;MQRankSum=-0.471;QD=11.63;ReadPosRankSum=4.285;VQSLOD=1.5937;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,2:36:40.09:0,40,670	1/1:0,9:9:23.86:175,24,0	0/0:24,0:16:2.20:0,2,74	0/1:16,0:12:14.04:14,0,29	1/1:11,6:21:9.74:200,10,0	1/1:6,20:28:54.76:384,55,0	1/1:6,17:23:38.74:284,39,0	0/0:26,2:29:34.96:0,35,474	1/1:1,15:17:40.79:290,41,0	0/0:19,1:22:8.08:0,8,229	0/0:15,0:15:32.89:0,33,293	0/0:25,1:29:50.02:0,50,622	0/0:15,0:15:45:0,45,409	0/0:19,3:22:20.01:0,20,312	1/1:5,28:34:55.50:400,56,0	1/1:5,19:26:35.89:381,36,0	1/1:3,20:27:50.52:333,51,0	0/0:16,0:16:38.74:0,39,361	0/1:12,10:23:14.30:187,0,14	1/1:6,22:28:37.49:400,37,0	1/1:10,22:32:53.61:392,54,0	0/1:10,1:12:1.05:1,0,134	0/0:13,0:14:32.77:0,33,278	0/0:15,0:15:29.98:0,30,270	0/0:15,0:15:16.24:0,16,288	1/1:6,13:19:9.48:230,9,0	1/1:7,16:23:44.64:324,45,0	1/1:7,11:19:22.82:159,23,0
chr10	92452992	.	GA	G	13158.66	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=11.225;DP=610;FS=19.736;HRun=2;HaplotypeScore=60.6377;InbreedingCoeff=0.9989;MQ=88.01;MQ0=0;MQRankSum=-2.803;QD=34.09;ReadPosRankSum=4.315;VQSLOD=3.0237;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:36.12:465,36,0	1/1:1,8:9:27.08:339,27,0	0/0:28,0:28:58.37:0,58,913	0/0:17,0:17:51.10:0,51,686	0/0:25,0:25:75.22:0,75,1039	1/1:0,21:21:51.17:660,51,0	1/1:0,18:18:48.16:621,48,0	1/1:0,41:41:99:1451,123,0	0/0:16,0:16:48.15:0,48,673	1/1:0,28:28:84.26:1074,84,0	1/1:0,17:17:51.16:653,51,0	1/1:0,33:33:87.28:1124,87,0	1/1:0,23:23:60.19:776,60,0	1/1:2,14:16:45.14:567,45,0	1/1:1,21:22:54.18:699,54,0	1/1:3,27:30:72.23:932,72,0	1/1:0,15:15:42.14:542,42,0	1/1:0,21:21:57.19:737,57,0	0/0:19,0:19:50.75:0,51,684	0/0:24,0:24:69.21:0,69,934	0/0:30,0:30:87.22:0,87,1173	1/1:0,18:18:45.15:579,45,0	1/1:1,24:25:63.20:815,63,0	1/1:0,10:10:21.07:272,21,0	1/1:0,23:23:66.21:853,66,0	0/0:22,1:23:24.37:0,24,824	0/0:26,0:26:78.21:0,78,1090	0/0:16,0:16:48.11:0,48,632
chr10	92453260	.	A	AGG	11368.38	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=13.893;DP=675;FS=18.721;HRun=7;HaplotypeScore=102.9824;InbreedingCoeff=0.9227;MQ=78.84;MQ0=5;MQRankSum=-1.266;QD=24.45;ReadPosRankSum=2.546;VQSLOD=2.7733;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:55.46:775,55,0	1/1:8,0:8:21.05:232,21,0	0/0:19,0:18:30:0,30,327	0/0:25,0:24:50.24:0,50,563	0/0:21,0:21:60.16:0,60,686	1/1:26,0:26:54.12:564,54,0	1/1:23,0:23:60.14:646,60,0	1/1:25,0:25:62.93:576,63,0	0/0:24,0:24:63.18:0,63,733	1/1:29,0:29:58.52:716,59,0	1/1:16,1:16:42.10:487,42,0	1/1:33,1:34:90.23:1008,90,0	1/1:27,2:29:56.63:890,57,0	1/1:25,1:25:68.78:784,69,0	1/1:19,0:18:26.54:475,27,0	1/1:39,0:38:90.10:948,90,0	1/1:31,0:31:50.37:716,50,0	1/1:18,1:19:45.11:508,45,0	0/0:19,0:19:39.09:0,39,454	0/0:28,0:28:78.22:0,78,908	0/0:29,0:29:81.23:0,81,942	1/1:23,0:23:54.12:585,54,0	1/1:19,1:20:42.08:428,42,0	1/1:14,0:13:27.06:278,27,0	1/1:29,1:30:49.68:738,50,0	0/1:17,0:17:13.60:14,0,441	0/0:25,0:25:69.20:0,69,801	0/0:20,0:20:60.18:0,60,698
chr10	92453266	.	G	GGT	19525.97	PASS	AB=0.900;AC=37;AF=0.661;AN=56;BaseQRankSum=-16.821;DP=704;FS=9.149;HRun=0;HaplotypeScore=78.6939;InbreedingCoeff=0.9195;MQ=79.00;MQ0=5;MQRankSum=-0.598;QD=39.77;ReadPosRankSum=2.906;VQSLOD=6.6294;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,36:39:80.84:1372,81,0	1/1:1,7:9:21.07:372,21,0	0/0:13,0:12:30.08:0,30,395	0/0:28,0:27:59.31:0,59,811	0/0:20,0:20:60.20:0,60,857	1/1:0,23:23:54.19:969,54,0	1/1:0,23:24:60.21:1075,60,0	1/1:2,27:30:84.19:1267,84,0	0/0:25,0:25:69.21:0,69,953	1/1:1,30:31:90.26:1545,90,0	1/1:1,17:19:42.14:735,42,0	1/1:3,33:36:90.31:1600,90,0	1/1:4,28:33:78.27:1375,78,0	1/1:2,25:28:68.85:1225,69,0	1/1:2,19:20:48.16:862,48,0	1/1:1,39:39:66.49:1588,66,0	1/1:2,30:33:69.24:1224,69,0	1/1:2,16:19:45.15:783,45,0	0/0:22,0:22:60.15:0,60,771	0/0:29,0:29:78.13:0,78,1087	0/0:30,0:30:87.26:0,87,1193	1/1:0,21:21:54.19:964,54,0	1/1:2,19:21:42.14:747,42,0	1/1:1,12:12:27.09:485,27,0	1/1:2,29:31:72.25:1280,72,0	0/1:16,2:18:59.52:60,0,553	0/0:25,0:25:75.20:0,75,1014	0/0:21,0:21:63.16:0,63,861
chr10	92453770	.	G	GA	8354.23	PASS	AB=0.715;AC=35;AF=0.625;AN=56;BaseQRankSum=-7.612;DP=609;FS=6.570;HRun=10;HaplotypeScore=66.4343;InbreedingCoeff=0.7915;MQ=77.22;MQ0=2;MQRankSum=0.942;QD=20.48;ReadPosRankSum=0.907;VQSLOD=5.8606;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:26:32.50:551,33,0	1/1:1,10:11:30.08:320,30,0	0/0:16,0:14:12.40:0,12,91	0/1:15,0:14:2.77:3,0,62	0/0:15,0:15:38.93:0,39,317	1/1:3,15:18:17.66:391,18,0	1/1:5,19:24:32.50:551,32,0	1/1:2,17:19:29.47:510,29,0	0/0:28,0:28:71.89:0,72,591	1/1:6,15:21:21.70:417,22,0	1/1:1,10:12:23.14:257,23,0	1/1:6,22:29:19.89:620,20,0	1/1:3,14:19:44.77:438,45,0	1/1:5,17:22:14.45:354,14,0	0/1:8,17:27:4.51:335,0,5	1/1:4,20:24:16.88:591,17,0	1/1:2,23:25:63.16:672,63,0	1/1:3,22:25:38.51:615,39,0	0/0:20,0:21:55.97:0,56,449	0/0:24,2:27:12.98:0,13,508	0/0:22,0:25:63.02:0,63,483	0/1:5,19:24:0.32:388,0,0	1/1:4,14:18:39.07:406,39,0	1/1:5,18:25:7.69:477,8,0	1/1:2,20:23:1.99:457,2,0	0/0:29,0:29:68.89:0,69,564	0/0:24,1:24:24.93:0,25,411	0/0:14,1:15:9.96:0,10,288
chr10	92454322	.	A	AT	16397.63	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-8.510;DP=749;FS=2.881;HRun=5;HaplotypeScore=82.5011;InbreedingCoeff=0.9818;MQ=87.14;MQ0=0;MQRankSum=-2.203;QD=34.09;ReadPosRankSum=4.394;VQSLOD=4.8492;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,43:44:99:1579,120,0	1/1:2,9:11:27.09:355,27,0	0/0:31,0:31:72.85:0,73,763	0/0:20,0:20:44.99:0,45,450	0/0:25,0:25:69.16:0,69,733	1/1:4,25:29:72.23:947,72,0	1/1:6,19:25:48.16:631,48,0	1/1:4,34:38:99:1326,102,0	0/0:23,0:23:63.14:0,63,669	1/1:5,24:29:78.24:986,78,0	1/1:4,20:24:60.20:790,60,0	1/1:1,33:34:99:1303,99,0	1/1:0,22:22:63.20:827,63,0	1/1:0,22:22:60.20:790,60,0	1/1:0,30:30:84.27:1105,84,0	1/1:1,36:37:93.30:1224,93,0	1/1:2,26:28:69.22:908,69,0	1/1:2,25:27:69.22:904,69,0	0/0:20,0:20:60.12:0,60,619	0/0:31,0:31:84.21:0,84,902	0/0:31,0:31:87.15:0,87,907	1/1:1,22:23:66.21:868,66,0	1/1:2,21:23:54.18:711,54,0	1/1:0,17:17:48.16:632,48,0	1/1:1,17:18:39.13:513,39,0	0/0:29,2:31:5.22:0,5,734	0/0:29,0:29:78.19:0,78,838	0/0:27,0:27:78.20:0,78,838
chr10	92454690	.	C	CTCTTTCTTTCTT	6150.04	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-9.702;DP=662;FS=0.000;HRun=0;HaplotypeScore=222.5399;InbreedingCoeff=0.7504;MQ=58.95;MQ0=5;MQRankSum=-2.617;QD=23.75;ReadPosRankSum=-5.510;VQSLOD=2.5838;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:99:571,0,353	0/0:10,0:10:20.78:0,21,160	0/0:16,0:13:11.97:0,12,102	0/0:18,0:10:13.43:0,13,102	1/1:5,18:24:17.92:338,18,0	0/0:31,0:31:42.26:0,42,343	0/0:18,0:18:17.93:0,18,146	0/1:40,0:39:12.73:13,0,366	1/1:5,19:28:6.02:355,6,0	0/0:26,0:26:50.35:0,50,576	0/1:10,0:10:2.35:2,0,111	0/0:32,0:32:57.05:0,57,609	0/0:37,0:37:60.11:0,60,621	0/0:22,0:22:45.10:0,45,508	0/0:40,0:40:44.49:0,44,393	0/0:25,0:25:26.73:0,27,217	0/0:25,0:23:26.04:0,26,280	0/0:20,0:19:16.49:0,16,337	1/1:18,0:18:31.30:399,31,0	1/1:10,23:34:41.79:967,42,0	1/1:10,0:10:26.99:342,27,0	0/0:20,0:20:41.75:0,42,508	0/0:19,0:19:46.74:0,47,435	0/0:10,0:10:18.01:0,18,175	0/0:34,0:33:63.10:0,63,680	1/1:8,20:30:69.06:1378,69,0	1/1:4,19:26:24.04:1252,24,0	1/1:4,8:12:9.03:533,9,0
chr10	92454705	.	T	TTTCC	9419.95	PASS	AB=0.998;AC=33;AF=0.589;AN=56;BaseQRankSum=3.591;DP=663;FS=0.404;HRun=0;HaplotypeScore=121.6838;InbreedingCoeff=-0.0691;MQ=58.24;MQ0=4;MQRankSum=2.034;QD=15.73;ReadPosRankSum=11.584;VQSLOD=2.9352;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:34:74.27:74,0,215	1/1:1,10:13:26.83:440,27,0	0/0:17,0:14:33.04:0,33,372	0/0:22,0:16:22.41:0,22,274	0/1:23,0:23:22.97:23,0,91	1/1:4,24:29:36.59:920,37,0	1/1:0,15:18:17.89:467,18,0	0/1:33,0:32:99:205,0,174	0/1:27,0:27:46.75:47,0,88	0/1:28,0:28:99:534,0,130	1/1:10,0:11:18.01:273,18,0	0/1:33,0:33:78.02:459,0,78	1/1:30,0:30:12.40:740,12,0	0/1:24,0:24:23.11:442,0,23	1/1:7,36:44:39.13:991,39,0	1/1:3,25:30:12.10:605,12,0	1/1:3,27:29:33.11:856,33,0	0/1:22,0:21:4.91:458,0,5	0/0:16,0:16:41.17:0,41,318	0/1:23,0:23:60.57:120,0,61	0/0:9,0:9:20.85:0,21,161	0/1:22,0:22:56.08:448,0,56	0/1:25,0:25:99:229,0,164	1/1:12,0:12:18.06:263,18,0	0/1:36,0:35:74.52:536,0,75	0/1:22,0:22:2.75:3,0,211	0/1:23,0:23:52.69:198,0,53	0/1:7,0:7:12.96:89,0,13
chr10	92454709	.	C	CTTCT	11319.10	PASS	AB=0.998;AC=38;AF=0.679;AN=56;BaseQRankSum=-2.518;DP=669;FS=11.351;HRun=0;HaplotypeScore=113.4728;InbreedingCoeff=0.1864;MQ=60.02;MQ0=4;MQRankSum=-1.987;QD=18.87;ReadPosRankSum=8.645;VQSLOD=2.9172;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:38:12.04:183,12,0	0/1:14,0:14:22.91:226,0,23	0/0:21,0:18:37.04:0,37,547	0/0:21,0:15:16.53:0,17,338	0/1:21,0:21:7.73:8,0,165	1/1:28,0:28:16.59:606,17,0	0/1:19,0:19:6.08:294,0,6	1/1:22,12:34:36.08:570,36,0	0/1:25,0:25:34.74:35,0,197	1/1:11,16:27:48.11:986,48,0	1/1:2,13:15:26.90:462,27,0	1/1:10,23:33:33.11:805,33,0	1/1:4,27:32:48.16:1194,48,0	1/1:4,18:22:30.10:747,30,0	0/1:40,0:41:6.81:635,0,7	1/1:29,0:29:0.11:391,0,0	0/1:30,0:29:8.85:536,0,9	1/1:5,17:21:30.10:744,30,0	0/0:16,0:16:24.06:0,24,358	0/1:25,0:25:88.33:88,0,202	0/0:11,0:11:23.92:0,24,264	1/1:5,16:21:39.08:805,39,0	1/1:10,13:23:18.06:408,18,0	1/1:3,9:14:18.06:414,18,0	1/1:9,26:35:36.12:896,36,0	0/1:16,0:16:66.83:67,0,258	0/1:25,0:25:99:149,0,220	0/1:9,0:9:70.16:70,0,76
chr10	92455012	.	TC	T	12305.79	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=6.045;DP=781;FS=7.050;HRun=7;HaplotypeScore=86.7074;InbreedingCoeff=0.9993;MQ=84.53;MQ0=0;MQRankSum=-2.661;QD=24.32;ReadPosRankSum=4.176;VQSLOD=5.2049;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,30:36:87.20:887,87,0	1/1:0,7:7:21.05:214,21,0	0/0:29,0:29:67.60:0,68,783	0/0:22,0:22:57.75:0,58,655	0/0:25,0:25:63.17:0,63,762	1/1:2,36:38:96.21:979,96,0	1/1:4,31:35:78.17:795,78,0	1/1:7,34:43:96.15:961,96,0	0/0:28,0:28:78.22:0,78,954	1/1:2,18:20:53.99:535,54,0	1/1:1,16:17:45.10:459,45,0	1/1:5,33:38:84.19:857,84,0	1/1:4,25:29:66.15:672,66,0	1/1:2,24:26:66.15:673,66,0	1/1:2,46:48:99:1224,120,0	1/1:7,35:42:99:1010,99,0	1/1:1,26:27:63.14:642,63,0	1/1:2,15:17:48.07:479,48,0	0/0:25,0:25:69.20:0,69,841	0/0:33,0:33:87.73:0,88,1072	0/0:35,0:35:99:0,105,1307	1/1:3,24:27:60.10:601,60,0	1/1:1,15:16:39.08:398,39,0	1/1:1,13:14:30.07:306,30,0	1/1:2,24:26:60.13:612,60,0	0/0:24,0:24:69.21:0,69,856	0/0:32,0:31:93.28:0,93,1154	0/0:22,0:22:54.17:0,54,679
chr10	92455328	.	ATT	A	9435.21	PASS	AB=0.920;AC=38;AF=0.679;AN=56;BaseQRankSum=5.538;DP=649;FS=25.028;HRun=12;HaplotypeScore=88.7586;InbreedingCoeff=0.8359;MQ=73.66;MQ0=3;MQRankSum=0.380;QD=20.83;ReadPosRankSum=5.109;VQSLOD=2.2374;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:25:60.11:610,60,0	1/1:1,6:7:18.04:183,18,0	0/0:19,0:19:3.66:0,4,131	0/1:9,0:10:6.03:6,0,83	0/0:19,0:22:41.10:0,41,532	1/1:3,11:14:27.05:275,27,0	1/1:2,25:28:65.88:653,66,0	1/1:10,31:42:92.58:908,93,0	0/0:35,0:36:83.70:0,84,1099	1/1:2,18:23:62.34:585,62,0	1/1:4,5:9:11.96:122,12,0	1/1:7,22:28:60.09:610,60,0	1/1:2,35:37:83.92:836,84,0	1/1:1,19:20:51.11:519,51,0	1/1:4,36:40:86.91:937,87,0	1/1:4,32:35:84.09:854,84,0	1/1:2,15:17:39.06:397,39,0	1/1:2,10:12:30.04:305,30,0	0/0:20,0:22:38.38:0,38,471	0/0:27,0:27:78.19:0,78,1050	0/0:25,0:25:57.15:0,57,767	1/1:1,19:21:41.79:479,42,0	1/1:3,10:13:27.03:275,27,0	1/1:2,23:26:53.83:601,54,0	1/1:8,9:17:27:275,27,0	0/1:22,2:24:6.84:7,0,571	0/0:23,0:24:61.24:0,61,876	0/0:18,0:19:54.16:0,54,768
chr10	92455522	.	T	TG	4275.77	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-15.791;DP=644;FS=8.138;HRun=7;HaplotypeScore=114.0772;InbreedingCoeff=0.9598;MQ=73.19;MQ0=1;MQRankSum=-2.326;QD=25.76;ReadPosRankSum=0.762;VQSLOD=4.0784;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.11:0,93,885	0/0:12,0:12:33.05:0,33,319	0/0:19,0:19:6.37:0,6,363	0/0:9,0:8:4.38:0,4,55	1/1:2,13:15:36.11:434,36,0	0/0:22,0:22:57.09:0,57,550	0/0:22,0:22:48.06:0,48,463	0/0:21,0:21:48.07:0,48,459	1/1:4,21:25:54.16:646,54,0	0/0:25,0:25:72.11:0,72,695	0/0:15,0:15:42.05:0,42,400	0/0:40,0:40:99:0,102,983	0/0:25,0:25:66.09:0,66,632	0/0:16,0:16:39.06:0,39,373	0/0:36,0:36:93.13:0,93,892	0/0:37,0:37:99:0,108,1039	0/0:39,0:39:99:0,111,1072	0/0:17,0:17:45.06:0,45,433	1/1:5,12:17:39.08:442,39,0	1/1:3,19:22:54.12:636,54,0	1/1:2,21:24:26.46:555,26,0	0/0:19,0:19:54.09:0,54,521	0/0:10,0:10:24.04:0,24,232	0/0:32,0:32:87.06:0,87,822	0/0:28,0:28:66.09:0,66,635	1/1:4,18:22:28.19:621,28,0	1/1:5,25:30:53.97:652,54,0	1/1:2,9:11:24.07:290,24,0
chr10	92457149	.	CCTTTG	C	30184.25	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=6.847;DP=659;FS=22.858;HRun=0;HaplotypeScore=185.3851;InbreedingCoeff=0.9827;MQ=83.94;MQ0=0;MQRankSum=-11.426;QD=50.73;ReadPosRankSum=8.179;VQSLOD=3.4738;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:57.15:1165,57,0	1/1:0,13:13:36.12:762,36,0	0/0:34,0:33:87.30:0,87,2599	0/0:30,0:30:87.30:0,87,2483	1/1:1,21:22:42.23:859,42,0	1/1:1,25:26:72.25:1516,72,0	1/1:3,23:26:57.15:1161,57,0	1/1:4,30:34:90.20:1599,90,0	1/1:1,23:24:63.22:1332,63,0	1/1:4,27:31:84.73:1681,85,0	1/1:0,21:21:63.22:1312,63,0	1/1:3,30:33:75.26:1578,75,0	1/1:1,19:20:51.18:1080,51,0	1/1:1,30:31:78.27:1619,78,0	1/1:0,30:30:84.29:1752,84,0	1/1:0,28:28:84.29:1777,84,0	1/1:1,12:13:30.08:596,30,0	1/1:2,7:9:15.05:317,15,0	1/1:1,18:19:51.13:1021,51,0	1/1:4,25:29:60.21:1255,60,0	1/1:3,5:8:15.02:275,15,0	1/1:0,27:27:57.37:1262,57,0	1/1:3,10:13:27.09:569,27,0	1/1:0,18:18:36.08:719,36,0	1/1:2,30:32:74.17:1587,74,0	1/1:4,14:18:46.03:918,46,0	1/1:3,31:34:87.30:1833,87,0	1/1:1,11:12:30.10:639,30,0
chr10	92458661	.	GA	G	7461.76	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.443;DP=462;FS=0.000;HRun=9;HaplotypeScore=78.1997;InbreedingCoeff=0.8317;MQ=68.61;MQ0=0;MQRankSum=-4.552;QD=17.04;ReadPosRankSum=1.868;VQSLOD=4.9984;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:51.02:467,51,0	1/1:0,8:8:24.01:220,24,0	0/0:16,0:14:18.89:0,19,221	0/0:7,0:5:6.02:0,6,69	1/1:4,0:16:16.28:48,16,0	1/1:1,13:14:39.02:357,39,0	1/1:4,19:22:60.03:548,60,0	1/1:7,17:24:51:461,51,0	1/1:2,0:9:16.30:48,16,0	1/1:3,15:18:42:379,42,0	1/1:0,20:20:57.02:520,57,0	1/1:1,15:16:39.01:357,39,0	1/1:2,16:18:30.01:275,30,0	1/1:3,7:10:12:110,12,0	1/1:3,11:14:36.02:329,36,0	1/1:5,19:25:65.06:582,65,0	1/1:7,22:28:40.41:623,40,0	1/1:2,16:18:42.02:384,42,0	1/1:5,0:19:28.06:86,28,0	1/1:3,0:11:16.29:48,16,0	1/1:6,0:13:14.26:42,14,0	1/1:2,11:13:30.01:274,30,0	1/1:0,8:8:18.01:165,18,0	1/1:4,24:28:60.03:549,60,0	1/1:1,17:19:44.06:390,44,0	1/1:7,1:18:31.30:111,31,0	1/1:5,0:18:26.73:78,27,0	1/1:1,0:3:4.07:12,4,0
chr10	92458687	.	AAC	A	442.09	PASS	AB=0.937;AC=9;AF=0.161;AN=56;BaseQRankSum=9.977;DP=469;FS=0.551;HRun=0;HaplotypeScore=123.0468;InbreedingCoeff=0.0301;MQ=52.95;MQ0=6;MQRankSum=-8.211;QD=4.02;ReadPosRankSum=1.009;VQSLOD=2.6725;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:38.24:0,38,988	0/0:9,0:9:27.09:0,27,479	0/1:12,0:6:15.33:15,0,88	0/0:17,0:5:6.25:0,6,179	0/1:12,1:12:29.82:71,0,30	0/0:14,0:14:42.14:0,42,734	0/0:19,0:18:54.18:0,54,898	0/0:32,0:31:83.74:0,84,1291	0/0:10,0:10:2.87:0,3,116	0/0:11,0:11:33.11:0,33,594	0/0:21,0:21:63.17:0,63,1056	0/0:18,0:17:48.13:0,48,806	0/0:17,0:17:45.09:0,45,784	0/0:10,0:10:27.09:0,27,495	0/0:16,0:16:48.16:0,48,906	0/0:19,0:19:57.17:0,57,981	0/0:26,0:25:75.14:0,75,1309	0/0:25,0:25:72.24:0,72,1302	0/1:17,1:17:99:128,0,116	0/1:12,1:13:92.30:92,0,95	0/1:8,2:10:6.49:6,0,153	0/0:8,0:8:24.07:0,24,386	0/0:8,0:8:24.08:0,24,439	0/0:30,0:30:87.26:0,87,1447	0/0:24,0:23:54.18:0,54,946	0/1:21,2:21:99:192,0,211	0/1:17,0:17:35.69:36,0,141	1/1:4,0:3:8.30:40,8,0
chr10	92458696	.	AC	A	1612.98	PASS	AB=0.649;AC=9;AF=0.161;AN=56;BaseQRankSum=9.588;DP=464;FS=6.193;HRun=1;HaplotypeScore=111.1514;InbreedingCoeff=0.1809;MQ=53.87;MQ0=11;MQRankSum=-8.552;QD=15.07;ReadPosRankSum=0.237;VQSLOD=3.2836;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:42.59:0,43,823	0/0:9,0:9:27.08:0,27,385	0/0:12,1:4:0.93:0,1,63	0/0:22,0:8:13.86:0,14,165	0/1:5,10:14:55.83:211,0,56	0/0:12,0:12:36.09:0,36,509	0/0:12,0:11:33.03:0,33,474	0/0:31,0:30:81.17:0,81,1137	0/1:3,6:9:42.73:164,0,43	0/0:10,0:10:30.10:0,30,453	0/0:21,0:21:57.17:0,57,824	0/0:17,0:16:45.13:0,45,643	0/0:17,0:17:45.15:0,45,675	0/0:11,0:11:27.09:0,27,408	0/0:16,0:16:48.16:0,48,727	0/0:20,1:21:18.25:0,18,786	0/0:26,0:25:66.06:0,66,1015	0/0:27,0:27:78.20:0,78,1135	1/1:7,11:18:5.41:431,5,0	0/1:6,9:13:19.65:253,0,20	0/1:5,3:8:0.35:86,0,0	0/0:5,0:5:15.05:0,15,223	0/0:11,0:10:30.03:0,30,421	0/0:25,0:25:72.18:0,72,1024	0/0:25,0:24:57.01:0,57,789	0/1:11,9:19:99:226,0,157	0/1:5,9:15:1.35:294,0,1	0/1:4,3:6:47.77:87,0,48
chr10	92458702	.	AAAAAAC	A	2145.06	PASS	AB=0.726;AC=10;AF=0.179;AN=56;BaseQRankSum=11.589;DP=489;FS=13.557;HRun=0;HaplotypeScore=156.1358;InbreedingCoeff=0.3308;MQ=55.36;MQ0=13;MQRankSum=-8.793;QD=18.98;ReadPosRankSum=0.686;VQSLOD=2.7877;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:39.14:0,39,1667	0/0:8,0:8:24.08:0,24,451	0/0:25,0:7:11.16:0,11,144	0/0:27,0:12:19:0,19,287	0/1:7,8:14:24.56:288,0,25	0/0:12,0:12:30.53:0,31,422	0/0:14,0:13:17.07:0,17,415	0/0:32,0:31:84.16:0,84,1945	1/1:6,3:9:12.36:224,12,0	0/0:11,0:11:33.11:0,33,883	0/0:19,0:19:57.20:0,57,1698	0/0:17,0:16:42.14:0,42,1162	0/0:19,0:19:51.13:0,51,1200	0/0:11,0:11:27.06:0,27,784	0/0:17,0:17:51.15:0,51,931	0/0:21,0:21:54.07:0,54,883	0/0:25,0:24:34.40:0,34,922	0/0:28,0:28:75.21:0,75,2175	0/1:11,7:18:7.69:417,0,8	0/1:10,6:14:11.02:360,0,11	0/1:9,2:11:15.02:36,0,15	0/0:7,0:7:15.12:0,15,472	0/0:11,0:10:30.09:0,30,735	0/0:24,0:24:60.18:0,60,1678	0/0:22,0:21:46.32:0,46,1192	0/1:13,9:20:99:471,0,100	1/1:11,4:15:19.87:339,20,0	0/1:4,3:6:5.43:164,0,5
chr10	92458708	.	CA	C	1257.77	PASS	AB=0.902;AC=14;AF=0.250;AN=56;BaseQRankSum=6.745;DP=502;FS=1.444;HRun=10;HaplotypeScore=116.5071;InbreedingCoeff=0.7133;MQ=54.64;MQ0=15;MQRankSum=-9.717;QD=11.33;ReadPosRankSum=1.684;VQSLOD=2.9760;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:27:37.90:0,38,630	1/1:0,8:8:24:208,24,0	0/0:33,2:9:20.22:0,20,197	0/0:37,1:13:4.27:0,4,77	0/0:14,0:15:20.75:0,21,140	1/1:3,0:10:14.25:42,14,0	1/1:5,0:12:8.13:31,8,0	0/0:34,0:33:81.07:0,81,858	0/0:7,0:8:8.94:0,9,58	0/0:10,1:11:1.02:0,1,239	0/0:21,0:21:63.16:0,63,689	0/0:19,0:18:48.09:0,48,505	0/0:18,0:18:36.09:0,36,391	0/0:10,0:10:24.06:0,24,265	1/1:1,15:17:47.03:396,47,0	1/1:4,13:18:49.99:414,50,0	1/1:13,11:24:39.39:336,39,0	0/0:28,0:28:78.04:0,78,838	0/0:12,0:17:8.02:0,8,80	0/0:13,0:14:17.75:0,18,108	0/0:7,0:10:13.24:0,13,75	0/1:6,1:7:5.17:5,0,156	0/0:11,0:10:21.06:0,21,232	0/0:21,0:21:54.13:0,54,587	0/0:21,0:20:36.10:0,36,398	0/0:18,0:21:41.11:0,41,294	0/1:12,1:13:7.06:7,0,103	0/0:5,0:6:3.95:0,4,30
chr10	92458730	.	C	CA	1588.48	PASS	AB=0.615;AC=15;AF=0.268;AN=56;BaseQRankSum=6.987;DP=520;FS=1.669;HRun=6;HaplotypeScore=122.0903;InbreedingCoeff=0.8217;MQ=69.30;MQ0=8;MQRankSum=-4.943;QD=14.18;ReadPosRankSum=-0.344;VQSLOD=2.6216;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:75.15:0,75,757	0/0:8,0:8:17.57:0,18,132	0/0:51,1:24:0.41:0,0,296	0/0:38,0:15:4.63:0,5,73	1/1:5,10:15:25.08:242,25,0	0/0:10,0:10:16.27:0,16,61	0/0:13,0:12:22.62:0,23,129	0/0:37,0:37:90.19:0,90,918	1/1:5,6:11:8.03:158,8,0	0/0:10,0:10:30.07:0,30,306	0/0:19,0:19:54.10:0,54,539	0/0:17,0:17:49.91:0,50,486	0/0:15,0:15:33.07:0,33,334	0/0:15,0:15:39.05:0,39,388	0/0:16,0:16:25.07:0,25,162	0/0:22,0:22:50.56:0,51,299	0/0:21,0:21:43.57:0,44,234	0/0:32,0:32:93.17:0,93,934	1/1:7,10:17:29.98:294,30,0	1/1:7,6:13:5.65:176,6,0	1/1:3,6:9:10.96:126,11,0	0/0:7,0:7:20.89:0,21,188	0/0:11,0:11:30.06:0,30,303	0/0:21,0:21:57.09:0,57,571	0/0:15,0:15:36.08:0,36,367	1/1:7,18:24:22.66:490,23,0	1/1:9,5:14:10.60:169,11,0	0/1:3,5:8:3.66:120,0,4
chr10	92458738	.	C	CA	3714.20	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=6.402;DP=497;FS=3.201;HRun=9;HaplotypeScore=108.0010;InbreedingCoeff=0.8671;MQ=75.04;MQ0=6;MQRankSum=-8.024;QD=19.34;ReadPosRankSum=0.588;VQSLOD=3.2444;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:80.95:0,81,698	1/1:5,5:10:18.01:180,18,0	0/0:43,1:26:12.93:0,13,293	0/0:29,1:17:6.94:0,7,89	1/1:15,0:15:21.50:236,21,0	1/1:0,10:10:24.06:265,24,0	1/1:1,10:10:1.02:239,1,0	0/0:34,0:34:48.18:0,48,573	0/1:10,0:10:6.75:143,0,7	0/0:11,0:11:26.98:0,27,231	0/0:17,0:17:41.98:0,42,365	0/0:16,0:16:38.96:0,39,335	0/0:13,0:15:37.07:0,37,298	0/0:14,0:14:29.98:0,30,260	1/1:4,10:14:24.06:263,24,0	1/1:3,17:20:51.14:564,51,0	1/1:5,18:23:39.11:431,39,0	0/0:32,0:32:77.95:0,78,677	1/1:14,0:14:30.50:303,30,0	1/1:13,0:13:18.13:194,18,0	1/1:7,0:7:12.03:127,12,0	0/0:10,1:11:26.97:0,27,230	0/0:11,0:11:23.99:0,24,208	0/0:18,0:19:49.98:0,50,416	0/0:14,0:14:29.96:0,30,255	1/1:24,0:24:27.86:505,28,0	1/1:14,0:14:6.13:139,6,0	1/1:7,0:7:12.03:125,12,0
chr10	92458899	.	TTTA	T	9035.62	PASS	AB=0.630;AC=51;AF=0.911;AN=56;BaseQRankSum=0.947;DP=312;FS=0.000;HRun=0;HaplotypeScore=80.0810;InbreedingCoeff=0.5910;MQ=54.78;MQ0=0;MQRankSum=-1.822;QD=29.72;ReadPosRankSum=2.037;VQSLOD=4.5564;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,10:17:0.71:382,0,1	1/1:1,7:8:21.07:306,21,0	0/0:5,0:4:9.03:0,9,165	0/0:3,0:3:3.01:0,3,56	1/1:6,5:11:21.07:290,21,0	1/1:6,10:16:39.13:551,39,0	1/1:3,3:6:12.04:164,12,0	1/1:15,21:36:63.20:896,63,0	1/1:2,7:9:21.07:296,21,0	1/1:2,15:17:45.15:652,45,0	1/1:2,6:8:21.07:305,21,0	1/1:2,9:11:24.08:340,24,0	1/1:4,5:9:18.06:261,18,0	1/1:4,3:7:12.03:156,12,0	1/1:4,3:7:12.04:175,12,0	1/1:2,6:8:18.06:261,18,0	1/1:4,18:22:51.17:742,51,0	1/1:3,11:14:30.10:423,30,0	1/1:3,14:17:39.13:558,39,0	1/1:3,14:17:42.14:588,42,0	1/1:1,2:3:6.02:87,6,0	1/1:2,2:4:6.02:80,6,0	1/1:5,5:10:18.06:257,18,0	1/1:0,3:3:9.03:120,9,0	1/1:5,5:10:15.05:211,15,0	1/1:5,8:13:30.06:412,30,0	1/1:8,8:16:24.08:349,24,0	1/1:1,4:5:12.04:175,12,0
chr10	92458947	.	GTTTT	G	8090.57	PASS	AB=0.615;AC=50;AF=0.893;AN=56;BaseQRankSum=-0.561;DP=373;FS=9.872;HRun=15;HaplotypeScore=129.8224;InbreedingCoeff=0.5388;MQ=72.39;MQ0=2;MQRankSum=-6.816;QD=24.89;ReadPosRankSum=5.905;VQSLOD=2.5991;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:21:25.46:230,25,0	1/1:3,0:4:2.94:24,3,0	0/0:27,0:21:35.21:0,35,442	0/0:19,0:14:33.50:0,33,478	1/1:2,9:12:26.63:333,27,0	1/1:2,1:13:32.91:277,33,0	1/1:1,0:9:20.93:165,21,0	1/1:16,14:30:54.79:741,55,0	1/1:2,9:11:27.04:366,27,0	1/1:8,11:19:38.94:507,39,0	0/1:5,5:9:10.24:184,0,10	1/1:3,6:9:17.95:245,18,0	1/1:2,8:10:29.24:352,29,0	0/1:2,6:9:14.42:183,0,14	1/1:0,0:15:44.90:354,45,0	1/1:1,0:11:26.35:231,26,0	1/1:2,1:14:24.03:264,24,0	1/1:6,15:22:43.09:531,43,0	1/1:9,10:19:28.03:458,28,0	1/1:4,16:21:37.20:633,37,0	1/1:1,1:2:3:41,3,0	1/1:0,5:5:12.04:163,12,0	1/1:2,8:12:23.48:292,23,0	1/1:4,6:10:14.69:261,15,0	1/1:1,5:6:17.99:222,18,0	1/1:3,10:13:36.05:453,36,0	1/1:1,9:11:30.07:374,30,0	1/1:1,5:6:15.03:204,15,0
chr10	92459256	.	TGGTGG	T	30094.59	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.172;DP=688;FS=0.000;HRun=0;HaplotypeScore=156.6471;InbreedingCoeff=0.9136;MQ=76.29;MQ0=1;MQRankSum=-10.620;QD=47.02;ReadPosRankSum=6.731;VQSLOD=4.3929;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,31:42:87.23:1706,87,0	1/1:0,3:3:6.02:124,6,0	0/0:28,0:28:66.21:0,66,1815	0/0:20,0:20:52.25:0,52,1288	1/1:1,12:13:30.10:621,30,0	1/1:0,17:17:45.15:932,45,0	1/1:3,24:27:42.14:870,42,0	1/1:6,25:31:72.19:1376,72,0	1/1:2,23:25:57.19:1180,57,0	1/1:8,12:21:36.10:701,36,0	1/1:0,12:12:33.11:684,33,0	1/1:3,38:41:99:2146,105,0	1/1:3,22:25:63.69:1306,64,0	1/1:3,29:32:75.19:1509,75,0	1/1:3,45:48:99:2237,108,0	1/1:0,25:25:72.18:1448,72,0	1/1:3,35:38:99:2050,99,0	1/1:2,35:37:78.27:1617,78,0	1/1:1,9:10:27.09:560,27,0	1/1:3,15:18:39.12:808,39,0	1/1:5,40:45:83.82:1740,84,0	1/1:1,18:19:48.16:994,48,0	1/1:0,17:17:30.10:621,30,0	1/1:2,41:43:99:2275,111,0	1/1:1,4:5:9.03:186,9,0	1/1:2,15:17:45.15:917,45,0	1/1:1,22:23:57.20:1178,57,0	1/1:1,5:5:15.05:311,15,0
chr10	92459262	.	GGTGGT	G	19226.21	PASS	AB=0.980;AC=49;AF=0.875;AN=56;BaseQRankSum=8.389;DP=665;FS=8.063;HRun=0;HaplotypeScore=192.4716;InbreedingCoeff=0.4855;MQ=73.62;MQ0=1;MQRankSum=-8.072;QD=30.96;ReadPosRankSum=10.436;VQSLOD=2.8299;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:33,2:35:39.19:1057,39,0	1/1:3,0:3:6.02:81,6,0	0/0:23,0:23:69.24:0,69,1998	0/0:21,0:20:50.74:0,51,1276	1/1:14,0:14:30.10:411,30,0	1/1:17,0:17:45.15:607,45,0	1/1:27,0:27:13.16:581,13,0	1/1:26,0:26:42.08:849,42,0	1/1:24,1:25:40.98:794,41,0	0/1:15,1:16:11.68:384,0,12	1/1:13,0:13:12.12:439,12,0	1/1:40,0:40:83.08:1446,83,0	1/1:22,1:23:63.68:879,64,0	1/1:29,1:30:72.23:999,72,0	1/1:46,0:46:93.36:1449,93,0	1/1:26,0:26:54.23:889,54,0	1/1:36,1:37:99:1345,99,0	1/1:36,0:36:46.28:956,46,0	0/1:14,0:14:62.82:312,0,63	1/1:16,0:16:39.13:552,39,0	1/1:43,1:44:23.85:1047,24,0	1/1:21,0:21:48.16:661,48,0	1/1:18,0:18:8.11:410,8,0	1/1:41,0:41:99:1433,111,0	0/1:5,0:5:5.96:107,0,6	1/1:17,0:17:28.14:571,28,0	1/1:25,0:25:14.21:761,14,0	1/1:6,0:5:15.05:206,15,0
chr10	92459950	.	CGTGAGTGAGTGCCG	C	11477.39	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.420;DP=714;FS=1.277;HRun=0;HaplotypeScore=284.6719;InbreedingCoeff=0.9897;MQ=86.63;MQ0=0;MQRankSum=-11.510;QD=74.05;ReadPosRankSum=1.354;VQSLOD=4.1533;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,129,7882	0/0:12,0:12:30.10:0,30,1809	0/0:27,0:27:72.25:0,72,3827	0/0:23,0:24:57.23:0,57,3394	1/1:4,16:20:30.10:1264,30,0	0/0:34,0:34:99:0,102,6690	0/0:37,0:37:99:0,111,6478	0/0:22,0:22:66.23:0,66,4155	1/1:6,17:23:39.13:1640,39,0	0/0:14,0:14:42.14:0,42,2727	0/0:18,0:18:51.15:0,51,2763	0/0:45,0:45:99:0,135,8621	0/0:26,0:26:78.25:0,78,5248	0/0:27,0:27:81.26:0,81,5079	0/0:35,0:35:99:0,99,6580	0/0:30,0:30:85.53:0,86,5628	0/0:42,0:42:99:0,120,8047	0/0:24,0:24:72.25:0,72,4633	1/1:2,14:16:42.10:1174,42,0	1/1:3,15:18:36.12:1515,36,0	1/1:9,13:22:24.08:1009,24,0	0/0:27,0:27:72.25:0,72,4926	0/0:18,0:18:54.19:0,54,3436	0/0:31,0:31:87.30:0,87,5949	0/0:20,0:20:57.20:0,57,3089	1/1:5,23:28:69.22:2340,69,0	1/1:5,19:24:51.18:2154,51,0	1/1:1,3:4:9.03:380,9,0
chr10	92460280	.	A	ACCC	8175.91	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=0.564;DP=542;FS=19.827;HRun=6;HaplotypeScore=92.3915;InbreedingCoeff=0.9900;MQ=84.40;MQ0=1;MQRankSum=-1.712;QD=23.49;ReadPosRankSum=2.096;VQSLOD=1.4384;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:26:44.83:350,45,0	1/1:3,4:7:12.04:235,12,0	0/0:23,0:23:60.12:0,60,802	0/0:22,0:22:14.85:0,15,563	0/0:12,0:12:30.10:0,30,426	1/1:2,15:19:31.35:634,31,0	1/1:2,18:22:42.12:836,42,0	1/1:7,0:23:41.92:393,42,0	0/0:23,0:23:69.23:0,69,975	1/1:2,0:15:29.28:220,29,0	1/1:1,0:9:17.95:154,18,0	1/1:5,0:27:53.79:419,54,0	1/1:2,0:20:32.63:245,33,0	1/1:0,0:23:44.83:350,45,0	1/1:1,20:21:48:1004,48,0	1/1:5,27:30:51.18:1076,51,0	1/1:2,20:22:42.14:889,42,0	1/1:0,0:12:32.87:256,33,0	0/0:20,0:20:39.08:0,39,521	0/0:12,0:12:30.06:0,30,396	0/0:25,0:25:60.13:0,60,794	1/1:1,0:13:20.92:163,21,0	1/1:0,0:9:20.66:163,21,0	1/1:3,0:31:65.75:512,66,0	1/1:0,0:15:35.86:279,36,0	0/0:16,0:16:42.13:0,42,594	0/0:26,0:26:78.25:0,78,1083	0/0:15,0:15:42.14:0,42,596
chr10	92460587	.	AG	A	799.62	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=2.847;DP=439;FS=0.000;HRun=1;HaplotypeScore=49.2602;InbreedingCoeff=0.5844;MQ=65.22;MQ0=0;MQRankSum=1.552;QD=18.60;ReadPosRankSum=1.045;VQSLOD=3.7029;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:63.21:877,63,0	0/0:12,0:12:36.04:0,36,485	0/1:10,0:7:28.30:28,0,30	0/1:6,0:7:0:0,0,0	0/0:22,0:22:63.20:0,63,880	0/0:16,0:16:48.13:0,48,643	0/0:16,0:16:48.07:0,48,577	0/0:32,0:32:93.20:0,93,1175	0/0:9,0:9:27.08:0,27,366	0/0:15,0:15:45.14:0,45,628	0/0:20,0:20:57.18:0,57,794	0/0:12,0:12:33.07:0,33,416	0/0:12,0:12:9.47:0,9,366	0/0:15,0:15:45.09:0,45,600	0/0:17,0:17:51.10:0,51,610	0/0:17,0:17:51.14:0,51,690	0/0:29,0:29:84.25:0,84,1150	0/0:21,0:21:60.18:0,60,828	0/0:20,0:20:60.18:0,60,824	0/0:16,0:16:48.16:0,48,685	0/0:10,0:10:30.07:0,30,393	0/0:6,0:6:18.06:0,18,257	0/0:10,0:10:30.07:0,30,391	0/0:3,0:3:5.95:0,6,61	0/0:22,0:22:63.18:0,63,864	0/0:16,0:16:22.75:0,23,556	0/0:16,0:16:48.16:0,48,679	0/0:12,0:12:36.10:0,36,495
chr10	92460772	.	CA	C	4145.14	PASS	AB=0.707;AC=44;AF=0.786;AN=56;BaseQRankSum=1.251;DP=552;FS=2.036;HRun=15;HaplotypeScore=62.8087;InbreedingCoeff=0.1257;MQ=68.94;MQ0=0;MQRankSum=0.164;QD=8.36;ReadPosRankSum=3.791;VQSLOD=3.0415;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,2:43:13.89:0,14,258	1/1:3,7:10:17.60:115,18,0	0/0:13,0:11:8.98:0,9,72	0/1:13,0:11:8.26:8,0,60	0/1:7,9:17:1.47:114,0,1	1/1:4,15:19:41.31:269,41,0	0/1:8,17:25:34.78:186,0,35	0/1:18,14:33:33.36:173,0,33	1/1:7,10:18:18.84:119,19,0	1/1:5,8:13:17.65:115,18,0	1/1:4,7:12:14.63:96,15,0	0/1:8,7:19:5.53:57,0,6	1/1:5,9:14:14.70:96,15,0	1/1:7,13:21:14.23:162,14,0	1/1:6,20:28:14.67:293,15,0	1/1:7,15:23:25.85:285,26,0	1/1:10,22:33:25.83:287,26,0	1/1:4,8:14:1.37:120,1,0	1/1:9,12:24:44.47:266,44,0	0/1:9,4:13:9.35:78,0,9	1/1:8,20:28:0.39:255,0,0	0/1:4,4:8:17.52:30,0,18	1/1:2,9:12:22.66:140,23,0	1/1:6,14:23:35.58:210,36,0	1/1:7,8:15:20.58:133,21,0	1/1:7,13:21:40.36:254,40,0	0/1:11,8:21:40.10:92,0,40	1/1:6,13:19:10.89:190,11,0
chr10	92461700	.	GC	G	14098.02	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=11.957;DP=592;FS=8.039;HRun=1;HaplotypeScore=74.2925;InbreedingCoeff=0.9942;MQ=85.08;MQ0=0;MQRankSum=-2.408;QD=38.10;ReadPosRankSum=3.140;VQSLOD=5.4026;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,45:45:99:1719,123,0	1/1:0,4:4:12.04:161,12,0	0/0:25,0:25:45.88:0,46,1065	0/0:23,0:23:57.16:0,57,868	0/0:14,0:14:42.12:0,42,645	1/1:0,11:11:33.11:461,33,0	1/1:0,22:22:57.19:797,57,0	1/1:0,39:38:99:1471,108,0	0/0:23,0:23:69.24:0,69,1097	1/1:0,16:16:48.16:672,48,0	1/1:0,12:12:36.12:503,36,0	1/1:0,23:23:63.21:881,63,0	1/1:0,19:19:51.15:695,51,0	1/1:1,17:18:39.13:541,39,0	1/1:0,20:20:57.19:796,57,0	1/1:0,27:27:66.22:923,66,0	1/1:0,23:23:63.21:881,63,0	1/1:1,19:20:57.19:790,57,0	0/0:27,0:27:81.27:0,81,1262	0/0:11,0:11:33.11:0,33,522	0/0:37,0:37:99:0,108,1674	1/1:0,16:16:42.14:587,42,0	1/1:0,20:20:60.20:837,60,0	1/1:0,23:23:66.22:923,66,0	1/1:0,12:12:33.11:462,33,0	0/0:20,0:20:18.56:0,19,866	0/0:27,0:27:81.28:0,81,1293	0/0:15,0:15:42.11:0,42,618
chr10	92461790	.	T	TCTC	5313.71	PASS	AC=34;AF=0.630;AN=54;BaseQRankSum=-10.235;DP=450;FS=43.169;HRun=0;HaplotypeScore=84.8180;InbreedingCoeff=0.8860;MQ=71.66;MQ0=6;MQRankSum=-5.048;QD=20.92;ReadPosRankSum=-0.867;VQSLOD=2.7655;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:37,3:38:57.14:883,57,0	1/1:5,0:5:15.04:206,15,0	0/0:24,0:14:20.32:0,20,211	0/0:32,0:21:16.41:0,16,146	0/0:15,0:15:23.94:0,24,230	./.	1/1:8,8:16:15.05:279,15,0	1/1:28,0:27:27.54:405,28,0	0/0:7,0:7:11.92:0,12,93	1/1:7,2:8:11.98:181,12,0	1/1:7,0:7:6.02:98,6,0	1/1:14,2:16:21.07:368,21,0	1/1:11,3:12:24.05:354,24,0	1/1:9,3:12:27.07:443,27,0	1/1:6,1:7:6.02:110,6,0	1/1:16,5:21:33.09:552,33,0	1/1:11,2:13:7.97:430,8,0	1/1:14,1:15:21.04:312,21,0	0/0:7,0:17:32.84:0,33,254	0/0:3,0:11:23.97:0,24,203	0/0:15,0:15:21.01:0,21,191	1/1:15,0:14:14.25:140,14,0	1/1:8,2:10:15.05:227,15,0	1/1:7,2:9:12.04:209,12,0	1/1:4,13:17:5.97:117,6,0	0/0:11,0:28:49.52:0,50,375	0/0:17,0:17:41.81:0,42,356	0/0:12,0:12:3.01:0,3,31
chr10	92461808	.	C	CCTCT	6325.17	PASS	AB=0.973;AC=42;AF=0.750;AN=56;BaseQRankSum=-3.312;DP=586;FS=132.355;HRun=0;HaplotypeScore=160.8071;InbreedingCoeff=0.3819;MQ=57.41;MQ0=16;MQRankSum=-5.813;QD=13.26;ReadPosRankSum=-5.879;VQSLOD=-0.1143;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:47,0:46:30.59:836,31,0	1/1:10,0:10:23.07:237,23,0	0/0:36,0:14:17.02:0,17,206	0/0:22,0:12:17.80:0,18,155	0/1:16,0:17:18.81:19,0,148	1/1:4,11:16:8.01:31,8,0	1/1:19,0:19:31.27:388,31,0	1/1:25,0:22:40.90:466,41,0	0/1:14,0:14:2.94:3,0,56	1/1:14,0:14:24.41:244,24,0	1/1:12,0:12:8.21:103,8,0	1/1:29,0:28:58.98:517,59,0	1/1:18,1:17:34.40:371,34,0	1/1:18,0:17:30.82:453,31,0	1/1:12,0:12:22.03:181,22,0	1/1:20,0:19:42.23:591,42,0	1/1:23,0:21:36.59:504,37,0	1/1:20,0:20:38.10:382,38,0	0/1:26,0:24:32.73:33,0,177	0/0:17,0:16:7.41:0,7,182	0/1:12,0:13:17.61:18,0,122	1/1:5,8:19:22.55:175,23,0	1/1:20,0:20:26.42:270,26,0	1/1:17,0:17:17.77:229,18,0	1/1:22,0:21:18.43:161,18,0	0/0:33,0:32:1.17:0,1,246	0/1:30,0:28:52.99:53,0,228	0/1:11,0:11:9.61:61,0,10
chr10	92461829	.	T	TG	3109.21	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-0.748;DP=435;FS=0.000;HRun=1;HaplotypeScore=56.3286;InbreedingCoeff=0.9680;MQ=65.41;MQ0=3;MQRankSum=1.602;QD=16.36;ReadPosRankSum=-0.903;VQSLOD=3.2744;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:37:60.72:441,61,0	0/0:3,0:3:8.86:0,9,56	0/0:32,0:18:30.47:0,30,326	0/0:12,0:6:11.88:0,12,99	0/0:16,0:16:27.60:0,28,191	0/0:8,0:8:17.88:0,18,136	0/0:10,0:10:22.54:0,23,132	1/1:3,1:25:62.82:522,63,0	0/0:15,0:15:32.17:0,32,253	1/1:10,1:11:29.90:254,30,0	1/1:1,9:11:20.64:133,21,0	1/1:19,3:21:53.91:463,54,0	1/1:10,1:11:26.92:225,27,0	1/1:10,1:11:23.96:203,24,0	0/0:15,0:15:44.74:0,45,356	0/0:11,0:10:26.88:0,27,217	0/0:5,0:5:11.63:0,12,73	1/1:10,0:10:20.93:178,21,0	0/0:21,0:21:32.94:0,33,251	0/0:16,0:16:33.78:0,34,264	0/0:14,0:14:33.72:0,34,245	1/1:13,0:13:29.89:245,30,0	1/1:11,0:11:29.61:232,30,0	1/1:11,0:11:14.99:132,15,0	1/1:14,0:14:35.94:309,36,0	0/0:24,0:23:8.91:0,9,214	0/0:22,0:22:57.45:0,57,397	0/0:21,0:21:32.76:0,33,234
chr10	92463019	.	C	CATCTATCT	4979.65	PASS	AB=0.805;AC=29;AF=0.558;AN=52;BaseQRankSum=-10.950;DP=736;FS=6.356;HRun=0;HaplotypeScore=204.0752;InbreedingCoeff=0.6630;MQ=57.50;MQ0=4;MQRankSum=-7.028;QD=11.58;ReadPosRankSum=-1.261;VQSLOD=3.2174;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:35:5.98:0,6,76	1/1:8,0:10:5.98:68,6,0	./.	./.	1/1:13,15:31:6.02:170,6,0	1/1:9,10:20:3.01:119,3,0	1/1:19,0:23:3.01:48,3,0	1/1:46,0:48:23.92:260,24,0	1/1:9,13:24:12.04:487,12,0	0/0:20,0:20:24.06:0,24,405	0/0:20,0:20:27.09:0,27,487	0/0:36,0:36:60.18:0,60,996	0/0:34,0:34:48.14:0,48,871	0/0:29,0:29:39.10:0,39,641	1/1:16,23:43:18.06:730,18,0	1/1:16,0:37:35.92:292,36,0	1/1:9,6:19:3.01:122,3,0	0/1:16,0:18:77.31:77,0,409	1/1:20,1:25:24:515,24,0	1/1:12,11:25:6.02:165,6,0	0/1:28,11:41:0:0,0,0	0/0:17,0:17:26.85:0,27,457	0/0:21,0:20:30.10:0,30,544	0/0:32,0:32:48.12:0,48,801	0/0:25,0:25:42.14:0,42,724	0/1:21,4:29:13.69:1074,0,14	1/1:13,7:21:12.04:487,12,0	1/1:7,4:11:9.03:366,9,0
chr10	92463038	.	CT	C	8972.26	PASS	AB=0.536;AC=18;AF=0.321;AN=56;BaseQRankSum=5.438;DP=708;FS=16.777;HRun=1;HaplotypeScore=103.0690;InbreedingCoeff=0.8318;MQ=55.90;MQ0=15;MQRankSum=6.383;QD=36.47;ReadPosRankSum=6.973;VQSLOD=2.9240;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:29.95:0,30,417	0/0:8,0:8:21.07:0,21,329	0/0:14,0:5:15.05:0,15,217	0/0:18,0:13:29.77:0,30,401	0/0:31,0:31:52.32:0,52,660	0/0:17,0:17:21.05:0,21,287	0/0:24,0:23:63.18:0,63,910	0/0:41,0:39:99:0,117,1796	0/0:27,0:27:50.17:0,50,644	1/1:0,18:18:51.16:697,51,0	1/1:0,15:15:42.14:587,42,0	1/1:0,39:39:99:1467,105,0	1/1:1,27:28:81.27:1116,81,0	1/1:0,28:28:72.24:1007,72,0	0/0:42,0:42:69.28:0,69,850	0/0:33,0:33:72.18:0,72,885	0/0:21,0:21:26.82:0,27,357	0/1:3,14:17:81.83:536,0,82	0/0:29,0:24:69.21:0,69,1012	0/0:28,0:26:49.20:0,49,643	0/0:33,0:33:41.90:0,42,643	1/1:0,20:20:51.17:713,51,0	1/1:0,18:17:51.17:713,51,0	0/1:3,29:32:50.74:1003,0,51	1/1:0,31:31:81.27:1133,81,0	0/0:33,1:32:54.32:0,54,1276	0/0:23,0:23:57.17:0,57,799	0/0:8,0:8:21.01:0,21,248
chr10	92464523	.	CTTG	C	428.01	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.014;DP=586;FS=3.811;HRun=0;HaplotypeScore=124.8862;InbreedingCoeff=0.9105;MQ=69.37;MQ0=0;MQRankSum=1.149;QD=21.40;ReadPosRankSum=-2.707;VQSLOD=3.1970;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:87.26:0,87,1751	0/0:15,0:15:42.13:0,42,844	0/0:19,0:19:35.90:0,36,602	0/0:10,0:10:11.19:0,11,241	0/0:22,0:22:63.20:0,63,1242	0/0:17,0:17:51.11:0,51,901	0/0:22,0:22:51.10:0,51,959	1/1:6,14:20:42.07:523,42,0	0/0:18,0:18:45.15:0,45,944	0/0:33,0:32:90.22:0,90,1833	0/0:19,0:19:51.17:0,51,1023	0/0:32,0:32:81.26:0,81,1648	0/0:16,0:16:39.13:0,39,819	0/0:10,0:10:24.01:0,24,442	0/0:17,0:16:36.06:0,36,711	0/0:17,0:17:42.05:0,42,797	0/0:19,0:18:45.15:0,45,948	0/0:16,0:16:36.08:0,36,714	0/0:16,0:16:30.10:0,30,564	0/0:29,0:29:78.12:0,78,1469	0/0:44,0:44:99:0,114,2359	0/0:20,0:20:60.12:0,60,1201	0/0:24,0:24:69.08:0,69,1359	0/0:17,0:17:45.15:0,45,947	0/0:22,0:22:57.18:0,57,1141	0/0:28,0:28:81.26:0,81,1620	0/0:23,0:23:58.96:0,59,1139	0/0:4,0:4:9.01:0,9,150
chr10	92464639	.	GCACACACACA	G	2210.53	PASS	AB=0.911;AC=16;AF=0.286;AN=56;BaseQRankSum=1.664;DP=575;FS=5.349;HRun=0;HaplotypeScore=280.4201;InbreedingCoeff=-0.0464;MQ=34.86;MQ0=15;MQRankSum=-1.506;QD=8.77;ReadPosRankSum=4.616;VQSLOD=1.8536;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:3.34:68,3,0	0/0:9,0:8:3.75:0,4,100	0/0:15,0:2:0:0,0,0	0/0:17,0:2:0:0,0,0	0/0:27,0:30:3.42:0,3,27	0/0:19,0:18:8.99:0,9,99	0/0:29,0:27:22.37:0,22,251	0/0:26,0:17:16.31:0,16,158	0/1:17,0:19:34.08:81,0,34	0/1:29,2:33:99:665,0,115	0/0:20,1:21:1.52:0,2,5	1/1:16,7:23:12.73:417,13,0	0/1:14,4:18:60.91:418,0,61	0/1:12,4:16:4.02:382,0,4	0/1:12,0:10:12.19:12,0,136	0/0:24,0:24:13.19:0,13,211	0/0:18,0:16:23.99:0,24,469	0/1:10,0:10:29.19:72,0,29	0/1:20,0:17:29.90:54,0,30	0/0:24,0:25:1.58:0,2,42	1/1:18,0:15:2.48:16,2,0	0/0:20,2:22:3.22:0,3,20	0/0:24,1:25:3.01:0,3,10	0/0:19,2:21:3.05:0,3,19	0/0:19,2:20:13.13:0,13,101	0/1:26,0:28:99:99,0,181	0/1:24,0:26:50.38:50,0,124	0/1:10,0:11:22.60:23,0,55
chr10	92464664	.	CACACAG	C	966.16	PASS	AB=0.974;AC=19;AF=0.339;AN=56;BaseQRankSum=4.159;DP=652;FS=42.001;HRun=0;HaplotypeScore=346.1774;InbreedingCoeff=-0.3516;MQ=37.16;MQ0=11;MQRankSum=-2.212;QD=2.15;ReadPosRankSum=4.591;VQSLOD=1.3432;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:9.72:10,0,83	0/1:10,0:9:4.48:4,0,64	0/0:8,0:5:8.13:0,8,94	0/0:16,0:7:8.95:0,9,83	1/1:27,4:31:0.22:44,0,0	0/0:19,0:18:26.04:0,26,224	0/0:26,0:24:41.11:0,41,418	0/1:43,0:32:3.33:3,0,400	0/0:23,0:23:19.47:0,19,90	0/1:32,0:32:48.70:49,0,282	0/0:26,0:26:0.12:0,0,3	0/1:22,0:22:69.42:81,0,69	0/1:19,0:19:74.73:79,0,75	0/1:21,0:21:15.14:99,0,15	0/1:17,0:15:40.61:41,0,91	0/0:25,0:25:36.63:0,37,339	0/0:23,0:21:25.64:0,26,321	0/0:18,0:18:34.26:0,34,251	0/1:20,0:19:4.96:5,0,209	0/1:29,3:32:46.75:60,0,47	0/0:18,0:15:2.92:0,3,18	0/1:26,0:25:19.03:19,0,46	0/1:19,0:19:2.59:16,0,3	0/1:21,0:21:14.97:15,0,25	0/1:38,1:39:46.66:47,0,70	0/1:27,1:28:99:166,0,175	0/1:27,2:29:99:126,0,169	0/1:9,4:13:62.31:252,0,62
chr10	92464666	.	C	CAGAGAG	3960.61	PASS	AB=0.988;AC=25;AF=0.446;AN=56;BaseQRankSum=5.992;DP=660;FS=14.494;HRun=0;HaplotypeScore=371.5043;InbreedingCoeff=0.1174;MQ=37.21;MQ0=13;MQRankSum=-6.527;QD=8.52;ReadPosRankSum=3.121;VQSLOD=0.9170;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:20.59:21,0,82	0/0:11,0:10:15.99:0,16,198	0/0:12,0:5:12.04:0,12,226	0/0:18,0:7:8.99:0,9,185	1/1:31,0:31:7.70:84,8,0	0/0:19,0:18:22.44:0,22,390	0/0:27,0:26:44.05:0,44,714	0/1:43,0:32:99:214,0,464	1/1:23,0:23:6.29:199,6,0	0/1:32,0:32:98.63:386,0,99	0/0:26,0:26:2.45:0,2,22	0/1:25,0:25:50.68:51,0,90	0/1:20,0:20:99:113,0,105	0/1:21,0:21:58.47:99,0,58	0/0:17,0:15:9.89:0,10,107	0/0:24,0:24:36.71:0,37,546	0/0:23,0:21:29.63:0,30,317	0/1:18,0:18:32.02:128,0,32	1/1:20,0:19:12.19:274,12,0	1/1:28,3:31:22.22:232,22,0	0/0:18,0:15:3.62:0,4,43	1/1:26,0:25:11.92:134,12,0	0/1:20,0:20:0.54:1,0,11	0/1:21,0:21:69.40:69,0,79	1/1:38,0:38:0.18:265,0,0	0/1:29,0:29:34.97:359,0,35	1/1:23,4:27:16.58:798,17,0	0/1:11,2:13:5.20:534,0,5
chr10	92464668	.	C	CAGAGAG	5873.89	PASS	AB=0.979;AC=30;AF=0.536;AN=56;BaseQRankSum=5.452;DP=721;FS=18.499;HRun=0;HaplotypeScore=413.2524;InbreedingCoeff=0.4780;MQ=36.59;MQ0=15;MQRankSum=-4.620;QD=11.30;ReadPosRankSum=-0.557;VQSLOD=2.0043;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:42.22:42,0,60	0/0:11,0:10:14.40:0,14,123	0/0:13,0:5:15:0,15,250	0/0:23,0:7:8.99:0,9,178	1/1:33,0:33:10.84:117,11,0	0/0:19,0:18:15.83:0,16,344	0/0:25,0:25:41.90:0,42,717	0/1:49,0:38:99:313,0,228	1/1:27,0:27:36.52:342,37,0	1/1:34,1:37:30.30:730,30,0	0/0:26,1:28:1.63:0,2,5	0/1:26,0:26:53.05:106,0,53	1/1:23,1:25:4.66:465,5,0	0/1:22,1:23:30.12:165,0,30	0/0:16,0:16:10.02:0,10,97	0/0:24,0:24:36.75:0,37,583	0/0:19,0:20:26.78:0,27,272	1/1:18,0:20:17.39:196,17,0	1/1:26,0:24:22:404,22,0	1/1:34,0:34:25.68:288,26,0	0/0:18,0:15:3.62:0,4,36	1/1:27,2:28:4.69:145,5,0	0/1:22,0:22:1.36:18,0,1	0/1:19,1:22:63.71:71,0,64	1/1:35,6:41:12.53:448,13,0	1/1:33,0:33:18.43:517,18,0	1/1:30,0:30:26.47:897,26,0	1/1:15,0:15:15.05:610,15,0
chr10	92464684	.	C	CAGAGAG	10606.62	PASS	AB=0.976;AC=37;AF=0.661;AN=56;BaseQRankSum=2.767;DP=870;FS=15.779;HRun=0;HaplotypeScore=447.4938;InbreedingCoeff=0.7252;MQ=39.70;MQ0=20;MQRankSum=-4.807;QD=14.86;ReadPosRankSum=-2.258;VQSLOD=1.5247;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:8.90:243,9,0	0/0:9,0:9:11.44:0,11,108	0/0:29,0:5:12.04:0,12,248	0/1:49,0:18:4.07:4,0,207	1/1:38,0:38:18.25:138,18,0	0/0:17,0:17:15.23:0,15,359	0/0:27,0:26:56.88:0,57,840	1/1:61,0:47:81.19:1188,81,0	1/1:35,0:35:15.14:386,15,0	1/1:54,0:54:99:1735,126,0	0/1:30,0:30:0.68:12,0,1	1/1:34,0:34:26.24:441,26,0	1/1:29,0:29:56.90:568,57,0	1/1:26,0:26:37.92:441,38,0	0/0:16,0:15:6.99:0,7,86	0/0:18,0:18:29.93:0,30,536	0/0:18,0:20:27.85:0,28,280	1/1:19,2:21:50.34:679,50,0	1/1:36,0:34:38.51:785,39,0	1/1:40,0:40:23.81:255,24,0	0/0:18,0:17:2.49:0,2,9	1/1:35,0:34:23.38:262,23,0	1/1:30,0:29:0.33:106,0,0	0/1:24,2:26:7.92:141,0,8	1/1:52,0:52:37.65:582,38,0	1/1:39,0:38:69:856,69,0	1/1:29,1:30:51.65:1078,52,0	1/1:16,0:16:44.83:707,45,0
chr10	92464694	.	A	AAG	6104.73	PASS	AB=0.912;AC=35;AF=0.625;AN=56;BaseQRankSum=-0.526;DP=892;FS=5.113;HRun=0;HaplotypeScore=420.8084;InbreedingCoeff=0.2479;MQ=40.45;MQ0=25;MQRankSum=-3.133;QD=8.42;ReadPosRankSum=-3.543;VQSLOD=3.1812;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,6:30:79.33:262,0,79	1/1:1,0:9:14.79:110,15,0	0/0:38,0:6:2.26:0,2,19	0/0:54,0:20:17.76:0,18,132	0/1:27,0:34:7.65:12,0,8	0/0:4,0:17:25.48:0,25,126	0/0:13,0:25:29.20:0,29,136	1/1:58,0:46:23.49:134,23,0	0/1:25,0:36:4.71:33,0,5	0/1:30,24:57:91.49:944,0,91	1/1:16,20:36:26.63:321,27,0	1/1:19,17:36:34.47:543,34,0	1/1:12,19:32:0.44:616,0,0	1/1:18,11:28:15.75:321,16,0	1/1:9,0:17:22.73:140,23,0	0/0:6,0:16:25.52:0,26,126	1/1:10,0:19:6.40:107,6,0	1/1:15,5:20:12.02:278,12,0	1/1:32,0:32:4.37:57,4,0	0/1:33,0:35:5.08:13,0,5	0/0:16,0:16:2.89:0,3,26	1/1:28,13:40:29.37:660,29,0	1/1:22,10:32:5.21:463,5,0	0/1:15,13:29:47.91:216,0,48	1/1:41,16:56:23.16:728,23,0	0/1:26,0:34:14.30:77,0,14	0/1:24,0:31:14.11:25,0,14	0/1:10,0:15:0.39:46,0,0
chr10	92464700	.	G	GACAC	2647.43	PASS	AB=0.936;AC=14;AF=0.250;AN=56;BaseQRankSum=3.986;DP=923;FS=5.281;HRun=0;HaplotypeScore=471.7220;InbreedingCoeff=0.0460;MQ=42.78;MQ0=27;MQRankSum=-5.119;QD=7.35;ReadPosRankSum=1.244;VQSLOD=0.3239;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:12.12:0,12,304	1/1:9,0:9:8.90:64,9,0	0/0:37,0:5:11.87:0,12,172	0/0:59,0:24:41.81:0,42,586	0/1:35,2:37:51.35:76,0,51	0/0:17,0:17:38.38:0,38,445	0/0:25,0:24:56.89:0,57,702	0/1:61,0:48:99:121,0,956	0/1:31,7:38:15.05:196,0,15	0/0:58,0:58:83.15:0,83,1496	0/0:37,0:37:27.89:0,28,340	0/0:35,0:35:45.56:0,46,370	0/0:32,0:32:65.29:0,65,559	0/0:29,0:28:30.52:0,31,230	0/1:17,0:16:7.10:7,0,17	0/0:18,0:18:39.04:0,39,486	0/1:18,0:19:48.94:49,0,172	0/0:22,0:22:25.02:0,25,383	0/1:24,5:29:99:539,0,307	0/1:31,6:37:38.98:216,0,39	0/1:19,1:20:5.43:5,0,60	0/0:41,0:40:44.08:0,44,445	0/0:37,0:35:36.29:0,36,445	0/0:28,0:28:19.11:0,19,230	0/0:58,0:57:77.68:0,78,797	1/1:35,5:39:15.19:983,15,0	0/1:35,2:37:84:341,0,84	0/1:16,0:16:79.21:212,0,79
chr10	92464750	.	AGAGAGAGAGAGC	A	4091.98	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-4.218;DP=1076;FS=2.281;HRun=0;HaplotypeScore=602.9504;InbreedingCoeff=0.9610;MQ=51.78;MQ0=16;MQRankSum=-6.474;QD=40.12;ReadPosRankSum=-0.379;VQSLOD=0.8070;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:45.13:0,45,2154	1/1:1,3:4:9.03:324,9,0	0/0:46,0:25:20.04:0,20,583	0/0:66,0:37:15.63:0,16,1008	0/0:50,0:50:55.73:0,56,2520	1/1:6,15:21:27.06:771,27,0	1/1:9,20:28:21.07:604,21,0	0/0:65,0:59:99:0,126,3872	0/0:44,0:44:53.08:0,53,1858	0/0:62,0:62:99:0,135,5296	0/0:36,0:36:41.89:0,42,1962	0/0:38,0:38:31.76:0,32,2541	0/0:35,0:35:60.13:0,60,2259	0/0:33,0:33:38.79:0,39,1809	1/1:5,16:21:27.09:915,27,0	1/1:5,18:23:42.13:1309,42,0	1/1:1,3:4:6.02:169,6,0	0/0:21,0:21:28.55:0,29,2020	0/0:38,0:34:56.46:0,56,2518	0/0:53,0:53:99:0,107,4674	0/0:37,0:37:50.87:0,51,2823	0/0:45,0:45:47.95:0,48,2822	0/0:56,0:56:78.76:0,79,4290	0/0:41,0:41:51.64:0,52,2929	0/0:58,0:58:80.86:0,81,3681	0/0:55,0:55:99:0,148,6792	0/0:35,0:35:68.84:0,69,2846	0/0:23,0:23:69.20:0,69,2526
chr10	92464760	.	AGC	A	637.05	PASS	AB=0.958;AC=15;AF=0.268;AN=56;BaseQRankSum=10.659;DP=1112;FS=6.336;HRun=0;HaplotypeScore=496.8878;InbreedingCoeff=0.6860;MQ=50.26;MQ0=18;MQRankSum=-6.622;QD=2.72;ReadPosRankSum=-5.896;VQSLOD=-0.2458;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:45.09:0,45,738	1/1:4,0:4:8.63:46,9,0	0/0:54,0:28:15.51:0,16,229	0/0:72,0:34:18.37:0,18,413	0/0:52,2:54:10.76:0,11,793	1/1:19,1:20:26.31:164,26,0	1/1:22,0:21:20.38:122,20,0	0/0:62,1:56:99:0,116,1727	0/1:43,2:45:57.93:58,0,569	0/0:62,0:62:82.89:0,83,1504	0/0:41,0:41:21.08:0,21,554	0/1:43,0:43:6.72:7,0,811	0/0:30,0:30:61.27:0,61,787	0/0:35,0:35:38.80:0,39,580	1/1:19,0:19:25.94:139,26,0	1/1:21,0:21:40.62:243,41,0	1/1:4,0:4:4.12:18,4,0	0/0:21,0:21:27.88:0,28,629	0/0:38,0:35:25.87:0,26,850	0/1:51,5:56:24.58:25,0,1359	0/0:39,0:40:53.83:0,54,943	0/0:50,0:50:18.76:0,19,861	0/0:62,0:62:31.89:0,32,1342	0/0:43,0:43:54.58:0,55,884	0/0:56,0:56:27.15:0,27,1126	0/0:59,0:59:99:0,118,2280	0/0:37,1:38:63:0,63,1061	0/0:22,1:23:33.97:0,34,790
chr10	92464783	.	CAG	C	4225.27	PASS	AB=0.808;AC=20;AF=0.357;AN=56;BaseQRankSum=2.390;DP=1047;FS=159.643;HRun=0;HaplotypeScore=408.3700;InbreedingCoeff=-0.3972;MQ=51.79;MQ0=17;MQRankSum=-7.210;QD=5.60;ReadPosRankSum=-4.178;VQSLOD=0.4469;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,8:37:74.99:104,0,75	0/0:5,0:5:15.05:0,15,213	0/0:61,0:38:70.12:0,70,891	0/0:76,0:30:22.09:0,22,362	0/1:46,10:56:48.81:49,0,166	0/0:21,0:21:35.76:0,36,432	0/0:27,0:26:27.05:0,27,387	1/1:32,10:31:27.87:627,28,0	0/1:23,11:34:52.13:272,0,52	0/1:41,14:55:99:534,0,248	0/1:23,14:37:68.74:92,0,69	0/1:17,16:33:56.92:319,0,57	0/1:17,8:25:63.62:186,0,64	0/1:23,8:31:87.39:148,0,87	0/0:22,0:22:42.14:0,42,587	0/0:28,0:28:51.06:0,51,642	0/0:10,0:10:24.08:0,24,368	0/1:16,0:16:7.29:7,0,123	0/1:34,4:35:99:263,0,122	0/1:49,9:58:99:154,0,270	0/1:35,6:41:16.20:16,0,219	0/1:26,17:43:79.66:164,0,80	0/1:44,13:57:99:182,0,224	0/0:37,4:41:10.91:0,11,213	0/1:32,9:41:99:180,0,158	0/1:41,11:52:99:371,0,380	0/1:21,15:36:87.90:452,0,88	0/1:18,4:21:99:104,0,106
chr10	92464785	.	G	GAC	12666.71	PASS	AB=0.746;AC=23;AF=0.411;AN=56;BaseQRankSum=-12.713;DP=1044;FS=56.725;HRun=0;HaplotypeScore=379.8367;InbreedingCoeff=-0.2571;MQ=51.75;MQ0=17;MQRankSum=5.220;QD=16.03;ReadPosRankSum=5.773;VQSLOD=3.2008;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,18:38:99:341,0,137	0/0:5,0:5:15.05:0,15,227	0/0:63,0:39:68.77:0,69,953	0/0:77,0:30:30.36:0,30,339	0/1:30,28:58:44.14:636,0,44	0/0:21,0:21:36.09:0,36,495	0/0:27,0:26:30.03:0,30,406	0/1:36,5:30:99:525,0,132	0/1:20,13:33:59.84:398,0,60	0/1:38,17:55:99:1195,0,245	0/1:25,11:36:36.42:313,0,36	0/1:23,9:32:99:304,0,119	0/1:17,7:24:84.84:302,0,85	0/1:22,11:33:78.53:356,0,79	0/0:22,0:22:42.14:0,42,635	0/0:29,0:29:54.07:0,54,729	0/0:10,0:10:24.08:0,24,359	1/1:2,13:15:21.06:559,21,0	0/1:26,11:34:99:555,0,157	0/1:40,18:58:99:1101,0,126	1/1:20,20:41:39.54:951,40,0	0/1:35,9:44:99:394,0,112	0/1:37,17:54:96.64:766,0,97	1/1:16,24:40:30.38:802,30,0	0/1:15,27:42:91.17:683,0,91	0/1:30,20:50:99:1526,0,139	0/1:27,10:37:99:541,0,142	0/1:10,12:21:61.68:418,0,62
chr10	92464801	.	CAGAG	C	6281.27	PASS	AB=0.775;AC=20;AF=0.357;AN=56;BaseQRankSum=2.612;DP=962;FS=132.708;HRun=0;HaplotypeScore=383.8632;InbreedingCoeff=-0.5557;MQ=48.66;MQ0=7;MQRankSum=-7.609;QD=8.55;ReadPosRankSum=0.695;VQSLOD=0.0702;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,10:33:99:119,0,544	0/0:9,0:9:27.09:0,27,649	0/0:52,0:40:95.53:0,96,2037	0/0:53,0:29:64.87:0,65,1262	0/1:40,10:50:99:161,0,747	0/0:20,0:20:36.12:0,36,914	0/0:29,0:28:30.05:0,30,783	0/1:35,9:39:99:529,0,1205	0/1:21,12:33:99:298,0,502	0/1:34,14:48:99:709,0,1338	0/1:22,11:33:99:173,0,387	0/1:12,18:30:99:444,0,359	0/1:14,10:24:99:347,0,341	0/1:17,14:31:99:162,0,543	0/0:23,0:23:51.18:0,51,1314	0/0:32,0:32:63.17:0,63,1500	0/0:9,0:9:27.09:0,27,673	0/1:12,2:14:99:112,0,712	0/1:24,6:29:99:391,0,928	0/1:49,11:60:99:295,0,983	0/1:35,6:41:46.31:46,0,1101	0/1:24,17:41:99:358,0,436	0/1:33,14:47:99:338,0,670	0/1:26,11:37:26.98:27,0,867	0/1:24,10:34:99:334,0,924	0/1:38,10:48:99:487,0,1669	0/1:18,17:35:99:779,0,432	0/1:18,4:22:99:174,0,533
chr10	92464841	.	ATG	A	328.99	PASS	AB=0.875;AC=6;AF=0.107;AN=56;BaseQRankSum=2.947;DP=826;FS=6.592;HRun=0;HaplotypeScore=207.7253;InbreedingCoeff=-0.1234;MQ=58.54;MQ0=0;MQRankSum=-2.630;QD=1.78;ReadPosRankSum=-5.699;VQSLOD=0.4477;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:87.30:0,87,1713	0/0:11,0:11:30.10:0,30,598	0/0:38,0:37:87.72:0,88,1771	0/0:42,0:42:93.16:0,93,1938	0/0:21,7:28:60.21:0,60,1216	0/0:26,0:26:54.19:0,54,1096	0/0:20,0:20:60.21:0,60,1150	0/1:44,6:48:99:127,0,1954	0/0:35,0:35:66.23:0,66,1320	0/0:29,2:31:6.99:0,7,1526	0/0:17,4:21:42.14:0,42,827	0/0:28,2:30:72.19:0,72,1391	0/0:23,2:25:31.26:0,31,1172	0/0:27,3:30:23.80:0,24,1151	0/0:33,0:33:78.27:0,78,1560	0/0:31,0:31:78.27:0,78,1561	0/0:17,0:17:45.15:0,45,881	0/1:4,3:7:99:100,0,209	0/0:25,0:25:29.08:0,29,1269	0/1:24,3:27:50.24:50,0,1032	0/1:29,5:33:35.79:36,0,792	0/0:32,5:37:41.71:0,42,1511	0/0:27,7:34:49.68:0,50,1019	0/0:25,4:29:60.68:0,61,1177	0/1:29,2:31:15.08:15,0,1291	0/1:34,2:36:99:125,0,1253	0/0:37,0:37:99:0,108,2105	0/0:23,0:23:22.07:0,22,1069
chr10	92467265	.	T	TA	6297.16	PASS	AB=0.933;AC=21;AF=0.375;AN=56;BaseQRankSum=-12.914;DP=615;FS=0.694;HRun=6;HaplotypeScore=59.5834;InbreedingCoeff=0.9236;MQ=77.29;MQ0=0;MQRankSum=-0.517;QD=27.50;ReadPosRankSum=2.470;VQSLOD=5.4124;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,123,1207	0/0:11,0:11:33.06:0,33,329	0/0:13,0:13:24.25:0,24,226	0/1:13,1:14:26.73:27,0,102	0/0:28,0:28:84.18:0,84,849	0/0:18,0:18:54.09:0,54,538	0/0:15,0:15:42.10:0,42,428	0/0:29,0:29:69.15:0,69,699	0/0:16,0:16:47.65:0,48,448	1/1:4,21:25:35.59:746,36,0	1/1:1,19:20:54.03:640,54,0	1/1:2,20:22:48.15:604,48,0	1/1:1,22:23:54.17:679,54,0	1/1:1,21:22:48.15:604,48,0	0/0:22,0:22:57.13:0,57,581	0/0:18,0:18:54.11:0,54,544	0/0:36,0:36:96.21:0,96,978	1/1:2,13:15:36.12:453,36,0	0/0:21,0:21:54.07:0,54,537	0/0:23,0:23:66.11:0,66,654	0/0:16,0:16:42.08:0,42,422	1/1:1,17:18:51.08:621,51,0	1/1:0,23:23:57.18:717,57,0	1/1:3,20:23:42.13:528,42,0	1/1:0,24:24:54.17:679,54,0	0/0:29,0:29:84.16:0,84,841	0/0:32,0:32:90.06:0,90,879	0/0:12,0:12:36.08:0,36,367
chr10	92467810	.	G	GT	1514.04	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.137;DP=500;FS=7.812;HRun=6;HaplotypeScore=48.2560;InbreedingCoeff=0.9895;MQ=77.18;MQ0=1;MQRankSum=-0.120;QD=26.56;ReadPosRankSum=-1.185;VQSLOD=3.1687;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.02:0,87,841	0/0:10,0:10:21.05:0,21,214	0/0:17,0:16:16.47:0,16,282	0/0:13,0:12:18.92:0,19,232	0/0:30,0:30:81.15:0,81,812	1/1:3,15:18:36.12:453,36,0	1/1:3,13:16:33.10:411,33,0	0/0:20,0:20:51.12:0,51,520	0/0:13,0:13:36.06:0,36,360	0/0:18,0:18:45.10:0,45,459	0/0:16,0:16:42.08:0,42,422	0/0:14,0:14:39.07:0,39,390	0/0:10,0:10:30.07:0,30,305	0/0:16,0:16:45.07:0,45,443	0/0:15,0:15:42.04:0,42,412	1/1:0,23:23:63.20:792,63,0	0/0:38,0:37:99:0,102,1041	0/0:22,0:22:60.13:0,60,612	0/0:20,0:20:42.07:0,42,420	0/0:20,0:20:54.11:0,54,544	0/0:16,0:16:39.09:0,39,398	0/0:10,0:10:24.05:0,24,245	0/0:16,0:16:42.09:0,42,428	0/0:10,0:10:27.05:0,27,270	0/0:12,0:12:27.06:0,27,275	0/0:22,0:22:60.13:0,60,612	0/0:24,0:24:68.58:0,69,698	0/0:8,0:8:24.05:0,24,245
chr10	92467942	.	C	CAAAA	2001.98	PASS	AB=0.768;AC=24;AF=0.429;AN=56;BaseQRankSum=2.705;DP=502;FS=4.200;HRun=15;HaplotypeScore=97.4511;InbreedingCoeff=0.3527;MQ=60.85;MQ0=12;MQRankSum=-4.084;QD=7.20;ReadPosRankSum=-3.729;VQSLOD=-0.6339;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:30:20.34:274,20,0	0/0:12,0:13:20.69:0,21,244	0/0:23,0:12:6.18:0,6,100	0/1:14,0:7:18.92:36,0,19	0/0:17,0:19:17.07:0,17,196	1/1:5,2:9:6.02:114,6,0	0/1:17,0:19:1.98:312,0,2	1/1:36,0:36:36.95:534,37,0	0/0:12,0:12:23.68:0,24,279	0/1:10,0:11:23.24:53,0,23	1/1:3,0:15:28.23:211,28,0	0/1:11,0:13:9.06:66,0,9	0/1:6,0:12:12.36:12,0,30	1/1:6,0:11:4.10:44,4,0	0/0:10,0:9:11.76:0,12,140	1/1:6,0:10:6.02:114,6,0	0/0:39,0:41:60.23:0,60,598	0/1:7,0:23:22.64:85,0,23	0/0:24,0:25:43.69:0,44,459	0/0:23,0:24:24.51:0,25,427	0/0:14,0:15:20.46:0,20,239	1/1:3,0:13:8.05:88,8,0	1/1:5,0:14:7.17:48,7,0	0/1:8,0:15:14.68:38,0,15	0/1:8,0:24:56.42:161,0,56	0/0:9,0:8:11.92:0,12,129	0/0:17,0:15:17.29:0,17,208	0/0:12,0:11:8.57:0,9,105
chr10	92472668	.	G	GA	2502.08	PASS	AB=0.680;AC=27;AF=0.482;AN=56;BaseQRankSum=-5.958;DP=429;FS=0.494;HRun=14;HaplotypeScore=65.7574;InbreedingCoeff=0.6613;MQ=72.45;MQ0=2;MQRankSum=-2.168;QD=10.83;ReadPosRankSum=-1.577;VQSLOD=2.8015;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,11:30:36.89:389,37,0	0/0:3,0:7:6.06:0,6,18	0/0:30,0:17:10.71:0,11,71	0/0:19,0:13:1.17:0,1,35	0/0:4,0:14:7.23:0,7,59	1/1:10,3:13:21.32:159,21,0	1/1:8,9:17:22.21:181,22,0	1/1:9,6:16:17.79:137,18,0	0/0:6,0:12:13.10:0,13,48	1/1:4,10:14:20.98:180,21,0	1/1:5,9:14:20.75:158,21,0	1/1:4,11:15:15.46:131,15,0	1/1:5,9:15:4.35:134,4,0	1/1:10,3:14:32.62:255,33,0	0/0:7,0:20:24.38:0,24,70	1/1:3,7:10:21:185,21,0	0/0:12,0:23:29.05:0,29,85	0/1:7,12:22:0.74:205,0,1	0/0:10,0:16:15.95:0,16,64	0/0:9,0:12:10.43:0,10,37	0/0:1,0:6:8.14:0,8,23	0/1:4,4:8:23.47:64,0,23	1/1:9,6:15:16.55:133,17,0	1/1:5,7:14:9.82:221,10,0	0/1:10,3:14:5.42:170,0,5	0/0:9,0:19:2.17:0,2,37	0/0:5,0:9:5.95:0,6,40	0/0:6,0:8:5.61:0,6,16
chr10	92472773	.	G	GA	318.16	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.654;DP=482;FS=6.157;HRun=14;HaplotypeScore=74.0961;InbreedingCoeff=0.5413;MQ=33.74;MQ0=28;MQRankSum=-1.821;QD=4.24;ReadPosRankSum=-0.075;VQSLOD=1.3758;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:7.27:0,7,186	0/0:10,0:9:5.92:0,6,70	1/1:42,0:5:6.62:37,7,0	0/0:44,0:9:1.30:0,1,30	0/0:15,0:14:23.02:0,23,129	0/0:10,0:10:17.53:0,18,114	0/0:9,0:9:13.29:0,13,110	1/1:29,4:31:45.01:392,45,0	0/0:12,0:11:25.49:0,25,174	0/0:16,0:15:28.99:0,29,223	0/0:16,0:16:29.89:0,30,202	0/0:12,0:12:3.83:0,4,114	0/0:11,0:11:18.52:0,19,101	0/0:5,0:5:10.46:0,10,67	0/0:18,0:18:7.12:0,7,147	0/0:18,0:16:17.99:0,18,180	0/0:18,0:17:27.85:0,28,186	0/0:20,0:17:12.44:0,12,67	0/0:21,0:19:11.50:0,11,146	0/0:20,0:20:25.87:0,26,228	0/0:8,0:7:8.57:0,9,40	0/0:8,0:8:7.86:0,8,95	0/0:10,0:10:17.60:0,18,120	0/0:13,0:13:0.50:0,0,41	0/0:17,0:15:21.05:0,21,144	0/0:26,0:23:55.47:0,55,382	0/0:12,0:10:20.71:0,21,120	0/0:10,0:8:17.89:0,18,138
chr10	92472784	.	GA	G	821.57	PASS	AB=0.921;AC=26;AF=0.464;AN=56;BaseQRankSum=-0.923;DP=519;FS=8.390;HRun=14;HaplotypeScore=77.6330;InbreedingCoeff=0.4395;MQ=45.58;MQ0=23;MQRankSum=3.179;QD=3.35;ReadPosRankSum=-1.484;VQSLOD=-0.0390;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:24:21.23:0,21,284	0/0:10,0:10:23.05:0,23,170	0/0:56,1:13:0.73:0,1,60	0/0:48,0:12:6.12:0,6,93	0/0:22,0:21:27.44:0,27,199	0/1:8,0:10:0.64:1,0,33	0/1:9,0:10:1.14:1,0,29	0/1:37,0:35:20.66:21,0,119	0/0:12,1:12:12.27:0,12,223	1/1:13,4:17:19.06:141,19,0	1/1:11,4:16:18.63:166,19,0	1/1:11,2:14:17.47:119,17,0	1/1:11,0:11:13.55:101,14,0	1/1:5,1:6:5.79:34,6,0	0/1:17,1:19:3.55:4,0,181	0/1:15,0:18:0.61:24,0,1	0/0:18,0:17:24.36:0,24,207	1/1:10,5:14:9.63:122,10,0	0/0:21,0:19:13.99:0,14,248	0/0:22,0:21:27.74:0,28,200	0/1:8,0:8:12.33:12,0,20	1/1:6,5:11:13.25:95,13,0	0/1:9,0:9:18.42:18,0,52	1/1:3,9:12:3.25:26,3,0	1/1:8,9:16:18.06:111,18,0	0/0:23,1:23:19.51:0,20,224	0/0:11,0:9:15.60:0,16,108	0/1:11,1:10:12.38:12,0,70
chr10	92473695	.	T	TAGAG	4366.36	PASS	AB=0.636;AC=9;AF=0.161;AN=56;BaseQRankSum=0.622;DP=805;FS=2.937;HRun=0;HaplotypeScore=138.9818;InbreedingCoeff=0.8729;MQ=71.27;MQ0=4;MQRankSum=0.928;QD=25.99;ReadPosRankSum=-3.972;VQSLOD=4.1957;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:45:32.43:310,32,0	0/0:12,0:12:30.07:0,30,465	0/0:49,0:39:15.55:0,16,356	0/0:62,0:29:11.75:0,12,275	0/0:29,0:29:69.22:0,69,1128	1/1:8,14:20:36.12:887,36,0	1/1:7,18:32:56.66:1285,57,0	0/1:15,0:35:8.35:314,0,8	0/0:29,0:29:57.18:0,57,929	0/0:22,0:22:45.15:0,45,753	0/0:24,0:24:66.22:0,66,1101	0/0:20,0:20:51.16:0,51,828	0/0:26,0:26:50.37:0,50,785	0/0:24,0:24:45.14:0,45,727	0/0:39,0:39:88.02:0,88,1478	1/1:8,24:34:65.96:1570,66,0	0/0:34,0:34:78.27:0,78,1299	0/0:25,0:25:63.20:0,63,1027	0/0:21,0:21:36.11:0,36,574	0/0:22,0:22:39.12:0,39,628	0/0:43,0:44:99:0,99,1568	0/0:30,0:30:69.16:0,69,1072	0/0:20,0:21:51.14:0,51,758	0/0:28,0:29:72.18:0,72,1124	0/0:19,0:19:36.10:0,36,575	0/0:28,0:29:53.49:0,53,1015	0/0:18,0:17:36.12:0,36,601	0/0:7,0:7:18.06:0,18,288
chr10	92474333	.	CT	C	1296.61	PASS	AB=0.897;AC=12;AF=0.214;AN=56;BaseQRankSum=-0.111;DP=579;FS=0.961;HRun=11;HaplotypeScore=85.1422;InbreedingCoeff=0.5661;MQ=70.51;MQ0=3;MQRankSum=-1.488;QD=8.42;ReadPosRankSum=3.742;VQSLOD=2.6761;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:36:85.94:696,86,0	0/0:8,0:8:18.05:0,18,192	0/1:17,2:15:30.76:31,0,94	0/0:16,0:13:23.94:0,24,211	0/0:23,0:23:54.14:0,54,576	1/1:0,11:12:26.01:203,26,0	1/1:2,16:19:39.23:305,39,0	0/0:23,0:23:45.10:0,45,473	0/0:16,2:18:14.43:0,14,345	0/0:19,0:19:51.12:0,51,538	0/0:21,0:21:49.01:0,49,513	0/0:15,1:16:5.46:0,5,256	0/0:23,0:23:54.10:0,54,563	0/0:21,0:21:45.11:0,45,480	0/1:16,2:18:7.09:7,0,334	1/1:1,8:9:23.97:197,24,0	0/0:31,0:31:84.21:0,84,895	0/0:30,0:30:56.56:0,57,775	0/0:30,1:29:41.59:0,42,638	0/0:26,0:26:61.03:0,61,635	0/1:20,3:23:25.81:26,0,367	0/1:16,2:18:1.17:1,0,400	0/0:23,0:23:54.14:0,54,575	0/0:17,0:17:39.10:0,39,416	0/0:19,0:19:45.11:0,45,480	0/0:35,3:38:31.39:0,31,943	0/0:13,0:15:5.17:0,5,206	0/0:7,0:7:6.02:0,6,64
chr10	92476465	.	GCACA	G	4043.93	PASS	AC=26;AF=0.500;AN=52;BaseQRankSum=0.107;DP=731;FS=10.838;HRun=0;HaplotypeScore=133.4814;InbreedingCoeff=0.8740;MQ=54.00;MQ0=29;MQRankSum=2.552;QD=13.39;ReadPosRankSum=3.493;VQSLOD=2.3697;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:44.68:0,45,822	0/0:7,0:7:3.01:0,3,49	./.	./.	0/0:12,0:18:6.46:0,6,49	1/1:12,1:17:6.01:75,6,0	1/1:16,0:31:23.93:206,24,0	0/0:20,0:19:16.22:0,16,211	0/0:9,0:25:44.16:0,44,726	1/1:14,7:22:11.50:275,12,0	1/1:7,8:16:15.04:217,15,0	1/1:13,14:27:30.10:470,30,0	1/1:11,7:21:24.06:319,24,0	1/1:13,11:26:30.08:433,30,0	0/0:13,0:32:21.03:0,21,290	1/1:13,0:28:15.35:261,15,0	0/0:20,0:25:15.05:0,15,287	1/1:6,9:16:19.80:327,20,0	0/0:17,0:17:14.94:0,15,246	0/0:5,0:18:14.35:0,14,248	0/0:45,0:43:9.03:0,9,152	1/1:9,7:18:8.10:206,8,0	1/1:12,8:22:24.07:357,24,0	1/1:15,18:34:17.13:522,17,0	1/1:7,13:20:22.55:374,23,0	0/0:25,0:25:6.80:0,7,744	0/0:11,0:21:18:0,18,216	0/0:5,0:7:6.49:0,6,105
chr10	92476743	.	A	AAG	280.27	PASS	AB=0.925;AC=4;AF=0.071;AN=56;BaseQRankSum=-3.139;DP=506;FS=7.948;HRun=0;HaplotypeScore=73.4461;InbreedingCoeff=-0.0715;MQ=53.40;MQ0=7;MQRankSum=1.717;QD=2.72;ReadPosRankSum=-0.816;VQSLOD=0.7780;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:31:2.58:3,0,228	0/0:2,0:2:5.90:0,6,41	0/1:15,0:6:7.25:7,0,120	0/0:9,0:7:11.20:0,11,151	0/0:19,0:18:32.98:0,33,194	0/0:18,0:18:26.56:0,27,198	0/1:14,0:13:1.36:1,0,176	0/1:24,18:41:61.81:353,0,62	0/0:17,0:17:13.05:0,13,85	0/0:31,0:29:37.40:0,37,377	0/0:10,0:9:11.94:0,12,95	0/0:14,0:14:12.06:0,12,86	0/0:15,0:14:20.80:0,21,136	0/0:23,0:23:17.76:0,18,130	0/0:21,0:21:36.68:0,37,269	0/0:15,0:15:16.64:0,17,117	0/0:35,0:34:44.42:0,44,315	0/0:17,0:17:28.44:0,28,199	0/0:21,0:21:31.80:0,32,312	0/0:12,0:11:20.45:0,20,117	0/0:12,0:11:17.81:0,18,147	0/0:15,0:15:32.36:0,32,234	0/0:15,0:14:22.34:0,22,157	0/0:20,0:19:21.03:0,21,132	0/0:6,0:6:8.97:0,9,71	0/0:23,0:23:36.95:0,37,276	0/0:19,0:19:15.97:0,16,180	0/0:14,0:14:24.35:0,24,200
chr10	92477137	.	A	AC	1116.92	PASS	AC=28;AF=0.583;AN=48;BaseQRankSum=-3.916;DP=128;FS=10.997;HRun=5;HaplotypeScore=24.7591;InbreedingCoeff=0.6659;MQ=110.48;MQ0=2;MQRankSum=-1.386;QD=17.73;ReadPosRankSum=1.006;VQSLOD=1.6064;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,4:6:9.03:118,9,0	./.	0/0:25,0:19:15.52:0,16,200	0/0:15,0:11:17.62:0,18,135	0/0:3,0:3:9.02:0,9,96	1/1:2,0:2:3.01:39,3,0	1/1:3,0:3:6.02:78,6,0	1/1:3,4:7:12.04:157,12,0	0/0:1,0:1:3.01:0,3,32	1/1:0,1:1:3.01:39,3,0	1/1:2,4:5:6.02:79,6,0	1/1:0,4:4:6.01:79,6,0	1/1:1,4:5:9.03:118,9,0	1/1:1,4:5:5.85:54,6,0	0/0:5,0:5:12.03:0,12,129	1/1:2,2:4:6.02:79,6,0	0/0:2,0:2:6.02:0,6,64	1/1:0,4:4:12.04:158,12,0	./.	0/0:4,0:4:9.01:0,9,89	0/0:4,0:4:9.02:0,9,97	1/1:0,3:3:9.03:118,9,0	1/1:1,2:3:6.02:79,6,0	1/1:4,6:10:8.89:94,9,0	./.	0/0:3,0:3:6.02:0,6,64	./.	0/0:1,0:1:3.01:0,3,32
chr10	92477613	.	GGC	G	6648	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.892;DP=505;FS=37.668;HRun=0;HaplotypeScore=103.1329;InbreedingCoeff=0.7104;MQ=71.45;MQ0=9;MQRankSum=-3.361;QD=14.87;ReadPosRankSum=1.813;VQSLOD=3.0397;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,2:27:41.88:334,42,0	1/1:11,0:11:20.96:185,21,0	0/0:27,0:15:15.89:0,16,297	0/0:30,0:20:37.78:0,38,337	1/1:18,1:18:47.14:387,47,0	1/1:11,0:10:17.21:141,17,0	1/1:27,0:26:38.65:413,39,0	1/1:22,0:21:53.99:480,54,0	1/1:21,2:23:53.55:473,54,0	1/1:16,0:16:32.28:250,32,0	1/1:13,0:13:23.95:235,24,0	1/1:10,0:10:20.40:156,20,0	1/1:12,0:11:26.65:202,27,0	1/1:18,1:19:35.25:287,35,0	1/1:12,1:13:23.91:188,24,0	0/1:14,0:14:2.36:159,0,2	1/1:12,2:14:6.63:159,7,0	1/1:19,0:18:8.79:95,9,0	1/1:15,1:14:29.47:237,29,0	1/1:13,1:14:26.74:200,27,0	1/1:25,0:24:43.92:312,44,0	1/1:13,0:13:20.99:193,21,0	1/1:8,1:9:14.87:124,15,0	1/1:27,1:28:50.93:443,51,0	1/1:21,2:23:5.82:61,6,0	1/1:21,0:21:54.04:504,54,0	1/1:23,1:24:13.87:346,14,0	1/1:3,1:3:9:84,9,0
chr10	92477615	.	CGCGT	C	6132.64	PASS	AB=0.992;AC=43;AF=0.768;AN=56;BaseQRankSum=-7.700;DP=500;FS=62.584;HRun=0;HaplotypeScore=116.0332;InbreedingCoeff=0.0288;MQ=67.45;MQ0=9;MQRankSum=-2.717;QD=13.75;ReadPosRankSum=0.736;VQSLOD=1.9669;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:27:26.47:276,26,0	0/1:12,1:13:17.08:155,0,17	0/0:26,0:14:15.89:0,16,297	0/0:28,0:17:37.78:0,38,337	1/1:20,0:19:3.48:272,3,0	0/1:11,0:10:80.52:116,0,81	0/1:28,0:27:42.65:367,0,43	1/1:20,0:19:53.99:480,54,0	1/1:25,0:25:21.33:402,21,0	1/1:12,2:15:32.56:297,33,0	1/1:11,1:13:23.82:239,24,0	1/1:5,3:9:19.97:222,20,0	1/1:7,1:10:26.68:226,27,0	1/1:14,2:19:35.26:318,35,0	1/1:13,1:14:0.07:143,0,0	0/1:13,0:14:99:152,0,121	0/1:15,0:15:59.79:104,0,60	1/1:2,17:18:8.26:145,8,0	0/1:14,0:12:22.51:172,0,23	0/1:15,0:15:47.56:48,0,112	0/1:23,0:22:96.83:217,0,97	1/1:8,1:12:21:219,21,0	1/1:6,2:9:14.73:148,15,0	1/1:23,2:25:51.28:506,51,0	1/1:3,17:22:5.50:36,6,0	1/1:21,0:22:40.38:484,40,0	0/1:24,0:24:50.80:313,0,51	1/1:5,0:4:8.99:77,9,0
chr10	92477666	.	GAC	G	3496.41	PASS	AB=1.000;AC=45;AF=0.900;AN=50;BaseQRankSum=0.583;DP=575;FS=6.981;HRun=0;HaplotypeScore=111.2477;InbreedingCoeff=0.1511;MQ=39.24;MQ0=38;MQRankSum=2.923;QD=7.72;ReadPosRankSum=0.816;VQSLOD=2.9375;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,7:8:5.95:48,6,0	./.	0/0:47,0:11:18.91:0,19,258	1/1:12,3:14:17.64:214,18,0	1/1:14,0:13:5.87:37,6,0	0/1:20,0:19:7.96:24,0,8	1/1:19,14:25:51.99:447,52,0	1/1:1,19:19:12.04:176,12,0	1/1:25,0:22:5.09:128,5,0	1/1:17,0:17:2.88:23,3,0	1/1:18,0:17:14.79:80,15,0	1/1:13,1:13:13.98:71,14,0	1/1:17,0:17:2.45:15,2,0	1/1:0,21:21:3.01:46,3,0	1/1:23,0:21:12.65:65,13,0	1/1:4,10:13:11.32:134,11,0	0/1:9,0:9:32.01:40,0,32	1/1:2,14:15:44.33:460,44,0	1/1:15,5:19:24.06:323,24,0	1/1:19,1:19:18.42:205,18,0	1/1:27,0:27:3:25,3,0	./.	1/1:20,0:18:5.90:41,6,0	0/1:25,0:25:11.24:11,0,25	1/1:14,4:17:50.68:564,51,0	1/1:4,27:29:19.25:224,19,0	1/1:6,1:6:5.40:94,5,0
chr10	92477684	.	CAGAG	C	1285.63	PASS	AB=0.833;AC=11;AF=0.220;AN=50;BaseQRankSum=1.675;DP=559;FS=7.273;HRun=0;HaplotypeScore=115.9793;InbreedingCoeff=0.4118;MQ=39.13;MQ0=35;MQRankSum=-2.678;QD=7.65;ReadPosRankSum=1.381;VQSLOD=2.0332;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:9,0:8:8.99:0,9,126	0/0:26,0:1:3.01:0,3,30	0/0:35,0:11:8.06:0,8,178	0/0:18,0:17:15.03:0,15,268	0/0:2,8:9:0.89:0,1,2	0/1:8,8:14:0.14:0,0,1	1/1:24,22:35:53.35:831,53,0	0/0:20,0:19:12.04:0,12,205	0/1:21,1:20:14.17:345,0,14	0/0:12,0:11:0:0,0,0	1/1:16,2:16:8.35:101,8,0	0/1:15,2:17:38.58:112,0,39	0/0:13,1:14:0.94:0,1,2	0/0:23,0:23:5.35:0,5,54	0/1:8,10:15:0.13:0,0,0	0/0:18,0:16:14.73:0,15,150	0/1:8,0:7:1.45:1,0,26	0/0:19,0:16:29.65:0,30,448	0/0:17,0:16:15.02:0,15,231	0/0:22,0:19:15.05:0,15,324	./.	./.	0/0:18,0:15:0:0,0,0	1/1:20,2:22:2.44:21,2,0	0/0:20,0:17:39.44:0,39,750	0/0:26,0:25:19.55:0,20,265	0/0:7,0:5:11.82:0,12,127
chr10	92477690	.	G	GAC	1357.29	PASS	AB=0.864;AC=14;AF=0.280;AN=50;BaseQRankSum=2.068;DP=544;FS=10.028;HRun=0;HaplotypeScore=114.1284;InbreedingCoeff=0.1164;MQ=39.94;MQ0=30;MQRankSum=-3.276;QD=5.78;ReadPosRankSum=1.545;VQSLOD=2.5611;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:8,0:7:8.99:0,9,110	0/0:18,0:1:2.94:0,3,18	0/0:28,0:10:8.50:0,9,178	0/0:18,0:17:17.92:0,18,231	0/0:11,0:10:0.89:0,1,3	0/1:12,0:11:0.13:0,0,0	0/1:44,0:33:16.28:671,0,16	0/0:19,0:18:15:0,15,200	0/1:12,12:21:17.99:456,0,18	0/1:7,7:13:0:0,0,0	1/1:6,12:16:8.99:159,9,0	0/1:15,3:17:36.20:139,0,36	0/1:7,8:15:0:1,0,0	0/1:24,0:24:19.39:19,0,52	1/1:19,0:16:2.31:8,2,0	0/1:17,1:16:4.17:4,0,110	0/1:7,0:6:1.45:1,0,25	0/0:17,0:13:8.94:0,9,395	0/0:17,0:16:15.02:0,15,188	0/0:24,0:21:17.23:0,17,236	./.	./.	0/0:8,9:15:2.57:0,3,11	0/1:18,4:22:14.28:23,0,14	0/0:21,0:18:45.10:0,45,587	0/0:25,0:24:22.13:0,22,218	0/0:8,0:6:10.02:0,10,81
chr10	92477694	.	GAC	G	440.88	PASS	AB=0.953;AC=19;AF=0.365;AN=52;BaseQRankSum=5.511;DP=493;FS=22.987;HRun=0;HaplotypeScore=100.0907;InbreedingCoeff=0.0387;MQ=41.25;MQ0=25;MQRankSum=-0.545;QD=1.63;ReadPosRankSum=-3.327;VQSLOD=-0.5818;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,2:26:0:0,0,0	0/0:8,0:7:4.73:0,5,65	0/0:8,0:1:3.01:0,3,31	0/0:22,0:8:9.98:0,10,158	0/0:18,0:17:11.89:0,12,228	1/1:11,0:10:4.46:19,4,0	0/1:9,1:9:0.13:0,0,0	0/1:30,9:28:57.60:244,0,58	0/1:18,0:17:8.14:8,0,185	0/1:20,1:18:4.75:119,0,5	0/1:11,0:10:0:0,0,0	0/0:16,0:14:0.12:0,0,5	0/1:18,0:17:6.33:6,0,51	1/1:14,0:14:2.49:17,2,0	0/1:26,0:26:36.35:36,0,56	1/1:15,1:13:1.14:3,1,0	0/1:17,0:15:31.42:31,0,77	0/1:7,0:6:5.79:6,0,38	0/0:14,0:11:31.72:0,32,459	0/0:12,0:12:9.03:0,9,163	0/0:24,0:20:2.13:0,2,270	./.	./.	1/1:13,2:13:2.86:24,3,0	0/1:17,3:20:10.17:56,0,10	0/0:20,0:17:11.11:0,11,641	0/0:24,0:23:2.42:0,2,254	0/0:8,0:6:5.98:0,6,93
chr10	92477708	.	CAGAGACAGAGAGAGAGAG	C	1265.15	PASS	AB=0.638;AC=21;AF=0.420;AN=50;BaseQRankSum=-0.450;DP=450;FS=18.382;HRun=0;HaplotypeScore=150.5808;InbreedingCoeff=0.6763;MQ=37.36;MQ0=33;MQRankSum=-1.902;QD=7.27;ReadPosRankSum=1.088;VQSLOD=1.5103;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:3.48:0,3,30	0/0:7,0:6:4.83:0,5,99	./.	./.	0/0:20,0:18:24.54:0,25,450	1/1:9,0:8:4.71:41,5,0	1/1:13,0:12:0.57:5,1,0	0/0:42,0:33:51.80:0,52,278	0/0:17,0:16:18.04:0,18,360	1/1:21,0:18:23.88:420,24,0	0/0:6,0:5:0.47:0,0,1	1/1:16,0:14:2.69:22,3,0	1/1:15,0:14:0.49:39,0,0	1/1:15,0:15:6.02:216,6,0	0/0:24,0:24:12.20:0,12,129	1/1:16,0:13:5.85:57,6,0	0/0:17,0:15:20.71:0,21,238	1/1:6,0:5:6:84,6,0	0/0:11,0:8:18.01:0,18,307	0/0:9,0:8:6.42:0,6,45	0/0:24,0:19:27.79:0,28,522	0/1:13,17:25:0:0,0,0	./.	1/1:15,0:13:5.36:134,5,0	1/1:18,0:18:17.02:410,17,0	0/0:23,0:19:45.88:0,46,885	0/0:26,0:24:25.21:0,25,543	0/0:8,0:6:11.99:0,12,169
chr10	92477714	.	CAGAG	C	925.47	PASS	AB=0.979;AC=21;AF=0.420;AN=50;BaseQRankSum=-0.750;DP=438;FS=0.000;HRun=0;HaplotypeScore=102.9914;InbreedingCoeff=0.0493;MQ=38.53;MQ0=34;MQRankSum=0.773;QD=3.28;ReadPosRankSum=1.923;VQSLOD=1.6026;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,2:25:3:0,3,26	0/0:6,0:5:0.89:0,1,2	./.	./.	0/1:19,1:17:0.17:104,0,0	1/1:10,1:9:11.90:145,12,0	1/1:11,1:11:2.60:46,3,0	0/0:33,0:28:1.25:0,1,3	0/1:15,0:14:0.60:76,0,1	0/1:20,0:17:40.45:40,0,61	0/1:4,0:3:0:0,0,0	0/0:15,0:13:0.94:0,1,1	0/1:16,0:15:0:0,0,0	0/0:15,0:15:8.75:0,9,34	1/1:23,0:24:8.61:50,9,0	1/1:17,1:16:17.92:235,18,0	0/1:15,0:14:5.86:6,0,77	0/1:9,0:8:6.02:6,0,32	0/1:16,1:13:14.35:21,0,14	0/0:6,2:7:0:0,0,0	0/1:24,0:18:43.87:74,0,44	1/1:28,0:23:1.81:5,2,0	./.	0/0:13,0:12:5.60:0,6,43	0/0:17,0:18:0.88:0,1,79	0/1:20,0:18:35.60:115,0,36	0/1:23,2:23:12.60:127,0,13	0/0:7,0:6:2.84:0,3,24
chr10	92477718	.	G	GAC	501.15	PASS	AB=0.959;AC=16;AF=0.320;AN=50;BaseQRankSum=2.440;DP=434;FS=21.267;HRun=0;HaplotypeScore=102.5127;InbreedingCoeff=0.2672;MQ=39.20;MQ0=35;MQRankSum=0.675;QD=2.60;ReadPosRankSum=-1.451;VQSLOD=0.4157;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:26:2.84:0,3,26	0/0:6,0:5:2.81:0,3,24	./.	./.	0/1:17,2:16:87.96:98,0,88	1/1:10,1:9:11.90:133,12,0	1/1:13,1:13:3:51,3,0	0/0:30,0:25:49.97:0,50,285	0/1:14,1:15:47.70:48,0,59	0/0:20,0:17:14.71:0,15,172	0/1:4,0:3:0:0,0,0	1/1:15,0:13:0.66:2,1,0	0/0:15,0:14:7.87:0,8,49	0/0:14,0:14:12.82:0,13,58	0/0:24,0:24:12.49:0,12,72	1/1:19,1:17:18.51:236,19,0	0/0:16,0:14:16.39:0,16,133	0/0:12,0:10:19.53:0,20,104	0/0:17,0:12:33.67:0,34,204	0/0:7,0:6:5.98:0,6,48	0/1:23,1:18:22.63:23,0,151	1/1:26,0:21:2.60:10,3,0	./.	0/0:15,0:13:5.45:0,5,43	0/0:18,0:18:15.51:0,16,90	0/1:19,1:16:21.04:21,0,199	0/1:25,0:23:25.71:26,0,83	0/0:8,0:6:11.49:0,11,71
chr10	92477991	.	ATACT	A	1895.60	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.434;DP=617;FS=0.000;HRun=0;HaplotypeScore=116.4462;InbreedingCoeff=0.9972;MQ=77.05;MQ0=0;MQRankSum=-2.246;QD=44.08;ReadPosRankSum=2.329;VQSLOD=4.1124;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,43:43:99:1990,105,0	0/0:13,0:13:39.13:0,39,1052	0/0:21,0:21:60.20:0,60,1431	0/0:23,0:23:57.02:0,57,1448	0/0:14,0:14:39.06:0,39,915	0/0:27,0:27:75.21:0,75,1933	0/0:31,0:31:87.30:0,87,2284	0/0:31,0:31:93.31:0,93,2399	0/0:19,0:19:54.19:0,54,1457	0/0:14,0:14:42.14:0,42,1123	0/0:25,0:25:72.25:0,72,1939	0/0:25,0:25:72.25:0,72,1908	0/0:13,0:13:39.13:0,39,1048	0/0:20,0:20:60.20:0,60,1566	0/0:15,0:15:45.15:0,45,1160	0/0:20,0:20:57.20:0,57,1499	0/0:30,0:30:87.30:0,87,2328	0/0:17,0:17:48.12:0,48,1233	0/0:18,0:18:45.15:0,45,1215	0/0:19,0:19:57.18:0,57,1481	0/0:28,0:28:81.26:0,81,2045	0/0:22,0:21:48.13:0,48,1218	0/0:10,0:10:24.06:0,24,588	0/0:31,0:30:87.27:0,87,2229	0/0:24,0:24:72.25:0,72,1910	0/0:28,0:28:81.28:0,81,2184	0/0:25,0:25:75.22:0,75,1962	0/0:11,0:11:30.10:0,30,766
chr10	92480649	.	A	ATGTG	906.84	PASS	AB=0.851;AC=25;AF=0.481;AN=52;BaseQRankSum=-4.708;DP=596;FS=4.917;HRun=0;HaplotypeScore=121.1181;InbreedingCoeff=0.3467;MQ=55.66;MQ0=7;MQRankSum=0.380;QD=2.40;ReadPosRankSum=-3.104;VQSLOD=1.4267;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:40:16.47:73,16,0	1/1:3,1:9:6.02:123,6,0	./.	./.	0/1:16,0:18:6.49:6,0,41	1/1:16,0:16:17.40:259,17,0	1/1:23,0:22:17.70:168,18,0	0/1:19,0:18:0.04:0,0,0	0/1:19,0:22:19.45:19,0,121	0/0:17,0:25:21.35:0,21,182	0/0:8,0:17:13.26:0,13,115	0/0:14,0:17:8.84:0,9,84	0/0:8,0:13:12.01:0,12,112	0/0:10,0:13:3:0,3,28	1/1:14,2:28:2.90:71,3,0	1/1:12,0:19:2.74:12,3,0	1/1:32,0:33:8.42:145,8,0	0/0:14,0:18:9.01:0,9,84	1/1:17,0:21:8.08:41,8,0	0/1:10,0:19:30.54:40,0,31	0/1:17,0:34:9.96:10,0,107	0/0:15,0:20:9.01:0,9,84	0/0:17,0:26:11.88:0,12,112	0/1:15,0:31:4.55:5,0,310	0/0:11,0:21:18.02:0,18,168	0/1:22,0:28:70.73:93,0,71	1/1:10,0:17:1.80:11,2,0	0/0:14,0:14:6.01:0,6,93
chr10	92482765	.	G	GATCTTACAA	39874.46	PASS	AB=0.950;AC=31;AF=0.554;AN=56;BaseQRankSum=-8.266;DP=636;FS=1.329;HRun=0;HaplotypeScore=155.0387;InbreedingCoeff=0.9014;MQ=76.18;MQ0=0;MQRankSum=-19.131;QD=102.77;ReadPosRankSum=-1.690;VQSLOD=4.6486;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,24:46:99:4262,111,0	0/0:9,0:9:24.08:0,24,726	0/0:20,0:20:57.15:0,57,1472	0/0:17,0:17:51.14:0,51,1395	0/0:26,0:26:72.25:0,72,2084	1/1:9,16:25:66.23:2855,66,0	1/1:10,19:30:75.26:3440,75,0	1/1:10,10:22:60.21:2303,60,0	0/0:18,0:18:54.19:0,54,1634	1/1:4,17:24:72.25:3186,72,0	1/1:4,12:18:51.14:1778,51,0	1/1:3,14:20:51.14:2297,51,0	1/1:3,15:18:48.16:2278,48,0	1/1:9,19:32:78.26:3345,78,0	0/0:20,0:20:57.20:0,57,1740	1/1:11,20:33:2.72:3667,3,0	0/0:31,0:31:87.27:0,87,2595	1/1:5,14:19:57.16:2535,57,0	0/0:13,0:13:39.13:0,39,1116	0/0:20,0:20:60.21:0,60,1766	0/0:47,0:47:99:0,138,4101	1/1:4,13:17:51.18:2193,51,0	1/1:11,12:25:60.16:2063,60,0	1/1:5,8:18:32.79:1523,33,0	1/1:10,11:21:51.18:2055,51,0	0/1:18,1:19:94.54:95,0,1392	0/0:21,0:20:63.22:0,63,1837	0/0:6,0:6:18.06:0,18,552
chr10	92482870	.	A	AT	4925.49	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=3.891;DP=611;FS=0.790;HRun=1;HaplotypeScore=62.4637;InbreedingCoeff=0.9996;MQ=84.64;MQ0=0;MQRankSum=-0.808;QD=39.40;ReadPosRankSum=-1.869;VQSLOD=4.6650;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:39:99:1449,99,0	0/0:12,0:12:36.12:0,36,467	0/0:24,0:24:72.17:0,72,902	0/0:20,0:20:40.85:0,41,595	0/0:15,0:15:45.15:0,45,584	1/1:0,19:19:54.18:808,54,0	1/1:0,27:27:72.24:1078,72,0	1/1:0,22:22:57.18:834,57,0	0/0:14,0:14:30.10:0,30,390	0/0:32,0:32:96.31:0,96,1246	0/0:12,0:12:30.10:0,30,389	0/0:25,0:25:75.24:0,75,970	0/0:19,0:19:57.18:0,57,737	0/0:24,0:24:72.19:0,72,900	0/0:21,0:21:63.20:0,63,818	1/1:0,18:18:51.17:756,51,0	0/0:31,0:31:90.29:0,90,1169	0/0:28,0:28:75.10:0,75,896	0/0:14,0:14:39.13:0,39,506	0/0:20,0:20:54.18:0,54,700	0/0:29,0:29:87.27:0,87,1115	0/0:23,0:23:66.21:0,66,856	0/0:12,0:12:30.10:0,30,390	0/0:28,0:28:76.80:0,77,975	0/0:19,0:19:54.18:0,54,701	0/0:28,0:28:81.25:0,81,1039	0/0:18,0:18:51.15:0,51,647	0/0:18,0:18:54.15:0,54,673
chr10	92483609	.	CT	C	456.50	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=5.272;DP=584;FS=0.841;HRun=7;HaplotypeScore=58.6172;InbreedingCoeff=0.7302;MQ=65.80;MQ0=8;MQRankSum=-0.203;QD=11.13;ReadPosRankSum=-0.585;VQSLOD=1.6136;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,1467	0/0:15,0:15:42.12:0,42,516	0/0:22,0:9:14.27:0,14,138	0/1:20,0:11:2.45:2,0,130	0/0:29,0:29:69.21:0,69,852	0/0:23,0:23:66.20:0,66,816	1/1:1,20:21:54.12:551,54,0	0/0:32,0:32:75.23:0,75,926	0/0:14,0:14:39.11:0,39,478	0/0:20,0:20:50.30:0,50,655	0/0:22,0:22:63.20:0,63,789	0/0:6,0:6:18.05:0,18,213	0/0:21,0:21:51.16:0,51,639	0/0:16,0:16:42.12:0,42,507	0/0:18,0:18:45.12:0,45,540	0/0:11,0:11:33.11:0,33,415	0/0:31,0:31:93.21:0,93,1128	0/0:17,0:17:51.15:0,51,624	0/0:32,0:32:84.26:0,84,1041	0/0:18,0:18:54.17:0,54,679	0/0:17,0:17:45.14:0,45,565	0/0:10,0:10:30.09:0,30,365	0/0:20,0:20:54.17:0,54,678	0/0:26,0:25:75.24:0,75,942	0/0:18,0:18:51.16:0,51,640	0/0:23,0:23:57.18:0,57,716	0/0:27,0:26:75.21:0,75,926	0/0:12,0:12:33.09:0,33,400
chr10	92484559	.	TTTG	T	2651.78	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=-1.992;DP=624;FS=4.583;HRun=0;HaplotypeScore=98.9966;InbreedingCoeff=0.6682;MQ=53.79;MQ0=15;MQRankSum=-4.134;QD=9.08;ReadPosRankSum=-7.046;VQSLOD=0.2635;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:26.80:0,27,310	0/0:10,0:10:23.88:0,24,242	0/0:45,0:4:4.43:0,4,72	0/1:53,0:13:21.26:21,0,93	0/0:21,0:21:34.32:0,34,294	0/1:21,0:21:20.23:20,0,142	0/0:16,0:16:20.07:0,20,142	0/0:25,0:24:48.34:0,48,541	0/1:14,0:14:9.51:10,0,102	1/1:37,0:34:94.85:798,95,0	1/1:10,1:11:28.96:236,29,0	1/1:2,7:9:11.79:98,12,0	1/1:10,0:10:26.85:212,27,0	1/1:16,0:15:35.65:299,36,0	0/0:16,0:16:29.90:0,30,298	0/0:12,0:12:12.13:0,12,100	0/0:37,0:37:49.54:0,50,875	1/1:13,0:13:33.54:260,34,0	0/0:32,0:32:7.81:0,8,437	0/0:31,0:31:11.68:0,12,411	0/0:13,0:12:19.09:0,19,239	1/1:17,0:16:35.72:276,36,0	1/1:18,0:18:18:149,18,0	1/1:20,0:20:36.93:323,37,0	1/1:20,0:20:13.73:102,14,0	0/1:33,0:33:58.57:59,0,424	0/0:28,0:28:46.39:0,46,450	0/0:12,0:12:28.94:0,29,242
chr10	92484561	.	TG	T	3562.30	PASS	AB=0.963;AC=35;AF=0.625;AN=56;BaseQRankSum=1.693;DP=619;FS=3.847;HRun=1;HaplotypeScore=78.4734;InbreedingCoeff=0.3076;MQ=53.70;MQ0=16;MQRankSum=-4.535;QD=7.50;ReadPosRankSum=-3.094;VQSLOD=-0.2501;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:32.49:32,0,83	0/0:9,0:9:20.69:0,21,127	0/0:46,1:5:6.51:0,7,78	0/1:51,0:12:19:19,0,65	0/1:21,1:22:39.72:40,0,112	1/1:21,0:21:36.86:160,37,0	1/1:16,0:16:23.37:107,23,0	0/1:24,0:23:5.73:6,0,288	0/1:14,0:14:13.17:13,0,71	1/1:37,1:35:98.75:840,99,0	1/1:10,1:11:29.93:263,30,0	1/1:7,2:9:11.77:80,12,0	1/1:10,0:10:26.88:214,27,0	1/1:12,4:15:37.57:273,38,0	0/0:16,0:16:29.44:0,29,208	1/1:12,0:12:25.28:92,25,0	0/1:37,1:38:16.38:16,0,404	1/1:10,2:12:35.55:294,36,0	0/0:31,0:31:11.76:0,12,311	0/1:31,0:31:38.12:38,0,164	0/1:9,4:12:19.03:19,0,119	1/1:15,1:15:35.79:284,36,0	1/1:2,15:17:18.38:155,18,0	1/1:17,3:20:41.83:340,42,0	1/1:1,18:19:15.02:157,15,0	0/1:30,1:31:99:120,0,193	0/0:27,1:28:14.92:0,15,296	0/0:11,1:12:20.17:0,20,126
chr10	92486078	.	A	AAGAG	2898.90	PASS	AB=1.000;AC=44;AF=0.846;AN=52;BaseQRankSum=-2.602;DP=523;FS=3.558;HRun=0;HaplotypeScore=120.8112;InbreedingCoeff=0.4114;MQ=63.02;MQ0=9;MQRankSum=-0.175;QD=7.04;ReadPosRankSum=0.344;VQSLOD=2.7600;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:8.99:75,9,0	1/1:10,0:10:3.45:22,3,0	./.	./.	1/1:17,0:22:3.05:21,3,0	1/1:19,0:18:10.39:151,10,0	0/1:17,0:17:18.41:125,0,18	1/1:35,0:35:11.22:64,11,0	1/1:15,0:15:11.74:81,12,0	1/1:15,0:16:10.89:141,11,0	1/1:13,0:14:16.28:225,16,0	0/1:16,0:16:0:0,0,0	1/1:9,0:9:14.58:143,15,0	1/1:14,0:15:10.28:178,10,0	0/0:13,0:16:8.90:0,9,84	1/1:21,0:20:21:229,21,0	0/0:18,0:20:2.97:0,3,21	1/1:20,0:20:31.87:513,32,0	1/1:18,0:18:6.88:58,7,0	1/1:20,0:20:8.99:74,9,0	1/1:20,0:18:4.22:39,4,0	0/0:17,0:18:4.62:0,5,30	1/1:10,3:13:3.01:70,3,0	1/1:16,6:24:5.27:81,5,0	1/1:12,0:12:13.83:134,14,0	1/1:22,0:21:22.81:228,23,0	1/1:5,10:17:17.09:352,17,0	1/1:7,0:7:2.99:23,3,0
chr10	92486557	.	A	AACACACAC	4172.77	PASS	AB=0.777;AC=48;AF=0.923;AN=52;BaseQRankSum=-1.702;DP=491;FS=0.000;HRun=0;HaplotypeScore=128.8734;InbreedingCoeff=-0.1592;MQ=60.01;MQ0=19;MQRankSum=-1.229;QD=9.44;ReadPosRankSum=-0.998;VQSLOD=2.1887;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:18:12.90:178,13,0	1/1:2,0:5:2.99:25,3,0	./.	./.	1/1:12,0:15:6.02:161,6,0	1/1:14,0:14:11.71:164,12,0	1/1:25,0:26:6.86:44,7,0	1/1:16,0:15:4.25:38,4,0	1/1:7,5:19:6.47:148,6,0	1/1:11,0:20:24.36:238,24,0	0/1:7,0:11:2.02:105,0,2	1/1:10,0:13:13.80:107,14,0	1/1:5,0:11:6.02:128,6,0	1/1:11,0:17:15.04:285,15,0	1/1:4,3:11:3.01:123,3,0	1/1:10,0:10:3.01:56,3,0	1/1:13,7:24:6:147,6,0	0/1:11,0:20:19.74:37,0,20	1/1:11,1:13:3.01:122,3,0	1/1:9,0:9:3.01:37,3,0	1/1:32,0:30:21.04:275,21,0	1/1:7,0:16:3.82:246,4,0	0/1:9,0:16:16.69:66,0,17	1/1:17,0:35:10:187,10,0	0/1:8,0:8:36.50:37,0,66	1/1:23,0:21:36.10:573,36,0	1/1:17,0:17:8.99:161,9,0	1/1:14,0:14:22.32:486,22,0
chr10	92486594	.	A	ACACACACA	4139.28	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-1.891;DP=601;FS=0.000;HRun=0;HaplotypeScore=145.4620;InbreedingCoeff=0.0323;MQ=57.30;MQ0=58;MQRankSum=-0.317;QD=7.39;ReadPosRankSum=-0.653;VQSLOD=2.3960;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:22:12.50:178,13,0	1/1:5,0:5:2.99:24,3,0	0/1:39,0:11:0:0,0,0	0/0:41,0:14:4.30:0,4,15	1/1:21,0:19:6.02:161,6,0	1/1:23,0:23:11.71:164,12,0	1/1:32,0:31:6.39:43,6,0	1/1:13,0:13:3.86:38,4,0	1/1:20,0:20:6.47:148,6,0	1/1:26,0:23:22.91:202,23,0	0/1:11,0:10:4.56:57,0,5	1/1:19,0:19:11.28:83,11,0	1/1:16,0:14:6.02:128,6,0	1/1:19,0:17:15.04:285,15,0	1/1:10,0:10:3.48:124,3,0	1/1:12,0:12:3.01:56,3,0	1/1:30,0:27:6:147,6,0	0/1:22,0:20:17.77:40,0,18	1/1:15,0:11:3.48:124,3,0	1/1:11,0:9:3.01:37,3,0	1/1:41,0:32:18.03:228,18,0	1/1:19,0:19:2.37:213,2,0	0/1:13,0:13:16.70:67,0,17	1/1:38,0:37:8.19:180,8,0	0/1:15,0:14:36.97:37,0,66	1/1:32,0:28:30.08:578,30,0	1/1:14,5:19:9.50:264,10,0	1/1:12,0:11:24.08:534,24,0
chr10	92486596	.	A	ACACACC	2925.16	PASS	AB=0.998;AC=29;AF=0.518;AN=56;BaseQRankSum=7.195;DP=598;FS=37.529;HRun=0;HaplotypeScore=135.5886;InbreedingCoeff=-0.5393;MQ=58.79;MQ0=58;MQRankSum=-0.574;QD=5.85;ReadPosRankSum=-2.728;VQSLOD=0.5219;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:23:99:109,0,124	0/1:6,0:6:18.94:21,0,19	0/0:39,0:12:8.86:0,9,130	0/0:43,0:16:26.04:0,26,225	0/1:21,0:19:84.02:84,0,165	1/1:1,19:23:12.04:326,12,0	1/1:6,0:33:9.21:137,9,0	0/1:13,0:13:4.01:4,0,151	0/1:19,0:19:61.82:62,0,155	0/1:23,0:20:64.34:64,0,229	0/1:10,0:9:35.30:51,0,35	0/1:20,0:20:64.95:65,0,202	0/1:16,0:14:99:142,0,113	0/1:19,0:17:47.81:343,0,48	0/1:9,0:9:39.40:54,0,39	1/1:0,9:12:2.88:108,3,0	0/1:23,0:23:45.30:45,0,236	0/1:18,0:17:23.95:24,0,155	0/1:16,0:12:36.17:36,0,196	0/1:12,0:10:24.63:25,0,61	0/1:42,0:33:29.76:30,0,255	0/1:20,0:20:79.84:209,0,80	0/1:12,0:12:92.09:92,0,94	0/1:37,0:36:99:221,0,220	0/0:16,0:15:5.30:0,5,239	0/1:33,0:29:99:312,0,237	0/1:21,0:20:99:140,0,164	1/1:10,0:9:24.05:384,24,0
chr10	92487277	.	A	AAT	1404.94	PASS	AB=1.000;AC=5;AF=0.096;AN=52;BaseQRankSum=-7.977;DP=201;FS=1.624;HRun=0;HaplotypeScore=24.9815;InbreedingCoeff=0.3930;MQ=80.17;MQ0=2;MQRankSum=-0.045;QD=25.09;ReadPosRankSum=-3.171;VQSLOD=2.9771;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:6:12.04:202,12,0	0/0:3,0:3:9:0,9,99	0/1:12,0:8:0.83:1,0,12	0/0:31,0:12:14.93:0,15,137	0/0:7,0:7:18.06:0,18,231	0/0:4,0:4:12.04:0,12,154	0/0:1,0:1:3.01:0,3,39	1/1:11,26:38:81.26:1314,81,0	0/0:4,0:4:12.04:0,12,154	0/0:6,0:6:15.04:0,15,184	./.	0/0:3,0:3:9.03:0,9,115	0/0:1,0:1:3:0,3,27	0/0:1,0:1:3.01:0,3,39	0/0:2,0:2:3.01:0,3,39	0/0:3,0:3:9.03:0,9,115	0/0:25,0:25:54.18:0,54,695	0/0:15,0:15:42.14:0,42,540	0/0:4,0:4:9.03:0,9,115	0/0:1,0:1:3.01:0,3,39	0/0:3,0:3:6.02:0,6,76	./.	0/0:1,0:1:3:0,3,27	0/0:1,0:1:3:0,3,27	0/0:7,0:7:21.07:0,21,270	0/0:4,0:4:12.04:0,12,154	0/0:2,0:2:2.99:0,3,23	0/0:14,0:14:33.11:0,33,424
chr10	92488739	.	TAC	T	2150.50	PASS	AB=0.740;AC=32;AF=0.640;AN=50;BaseQRankSum=0.300;DP=576;FS=12.207;HRun=0;HaplotypeScore=96.2396;InbreedingCoeff=0.5194;MQ=62.62;MQ0=11;MQRankSum=0.034;QD=6.32;ReadPosRankSum=2.443;VQSLOD=1.9715;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:38:2.01:0,2,46	0/0:2,0:6:3:0,3,26	./.	./.	0/1:7,1:15:2.78:60,0,3	0/0:16,0:21:15:0,15,147	0/0:13,0:22:23.05:0,23,225	./.	1/1:7,0:14:22.73:112,23,0	0/1:18,4:22:39.05:95,0,39	1/1:1,1:3:5.85:47,6,0	1/1:15,7:24:27.90:262,28,0	1/1:6,0:16:22.76:100,23,0	1/1:14,12:27:29.91:308,30,0	0/0:14,0:24:32.98:0,33,299	0/0:13,0:26:17.90:0,18,174	0/0:17,0:34:54.02:0,54,525	1/1:9,7:17:14.01:183,14,0	1/1:10,0:12:6.15:29,6,0	1/1:8,0:13:11.36:56,11,0	1/1:43,0:47:17.60:78,18,0	1/1:11,6:19:14.71:126,15,0	0/1:11,3:18:21.71:120,0,22	1/1:15,20:38:50.63:502,51,0	1/1:6,4:11:6.01:65,6,0	0/1:13,7:19:12.88:116,0,13	1/1:12,0:17:11.36:56,11,0	1/1:3,0:4:2.84:14,3,0
chr10	92489254	.	AAG	A	1325.06	PASS	AB=0.963;AC=9;AF=0.161;AN=56;BaseQRankSum=7.117;DP=623;FS=0.579;HRun=0;HaplotypeScore=79.7445;InbreedingCoeff=0.6644;MQ=65.87;MQ0=1;MQRankSum=-2.543;QD=10.77;ReadPosRankSum=2.092;VQSLOD=2.8978;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,1:44:71.43:0,71,1670	1/1:3,10:13:30.05:352,30,0	0/0:29,0:22:14.45:0,14,345	0/0:22,0:20:23.97:0,24,433	0/0:21,0:21:60.20:0,60,971	0/0:17,0:17:42.14:0,42,683	0/1:27,2:29:7.65:8,0,880	0/0:31,1:32:19.06:0,19,796	0/0:16,0:16:27.09:0,27,440	0/0:30,0:30:63.19:0,63,974	0/0:17,0:17:42.14:0,42,685	0/1:13,0:13:1.13:1,0,360	0/0:22,1:23:20.37:0,20,814	0/0:15,0:15:33.11:0,33,529	1/1:8,11:19:29.99:369,30,0	0/0:19,0:19:51.16:0,51,806	1/1:6,22:28:60.19:739,60,0	0/0:19,0:19:51.17:0,51,821	0/1:20,1:21:3.80:4,0,426	0/0:23,1:24:23.27:0,23,888	0/0:36,0:36:72.25:0,72,1167	0/0:20,0:20:57.19:0,57,913	0/0:22,0:22:45.15:0,45,727	0/0:23,0:23:54.18:0,54,875	0/0:15,0:15:42.12:0,42,637	0/0:24,0:24:66.23:0,66,1069	0/0:27,0:27:75.22:0,75,1160	0/0:4,0:4:6.02:0,6,88
chr10	92489368	.	C	CG	4946.44	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=2.959;DP=503;FS=4.388;HRun=1;HaplotypeScore=61.1285;InbreedingCoeff=0.9543;MQ=56.36;MQ0=33;MQRankSum=2.477;QD=32.12;ReadPosRankSum=2.924;VQSLOD=4.5331;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1430	0/0:9,0:9:27.06:0,27,332	0/0:21,0:4:8.83:0,9,75	0/0:21,0:4:3.01:0,3,39	0/0:24,0:22:54.02:0,54,671	0/0:13,0:11:11.19:0,11,270	0/0:24,0:23:57.09:0,57,697	0/0:28,0:18:51.07:0,51,594	0/0:15,0:15:39.08:0,39,450	1/1:3,18:19:51.17:760,51,0	1/1:3,17:20:44.81:558,45,0	1/1:1,13:14:39.13:575,39,0	1/1:2,5:6:12.04:179,12,0	1/1:1,8:9:27.09:396,27,0	0/0:18,0:18:42.08:0,42,469	0/0:9,0:9:24.06:0,24,285	0/0:16,0:16:48.13:0,48,602	1/1:1,13:13:39.13:581,39,0	0/0:22,0:15:39.12:0,39,489	0/0:15,0:14:36.05:0,36,418	0/0:13,0:12:29.91:0,30,364	1/1:2,13:14:24.08:354,24,0	1/1:2,16:18:32.95:456,33,0	1/1:0,15:15:33.11:490,33,0	1/1:5,16:20:42.01:597,42,0	0/0:27,0:26:75.20:0,75,910	0/0:18,0:17:51.07:0,51,587	0/0:13,0:12:33.11:0,33,421
chr10	92489382	.	CA	C	495.46	PASS	AB=0.775;AC=7;AF=0.125;AN=56;BaseQRankSum=2.794;DP=483;FS=11.462;HRun=12;HaplotypeScore=64.9521;InbreedingCoeff=0.4390;MQ=57.53;MQ0=16;MQRankSum=-0.243;QD=7.08;ReadPosRankSum=2.581;VQSLOD=1.0967;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,102,1006	1/1:1,8:9:20.91:163,21,0	0/0:16,0:3:0:0,0,0	0/0:19,0:4:0:0,0,0	0/0:20,0:21:44.70:0,45,406	0/0:15,0:13:36.04:0,36,355	0/0:23,0:22:54.11:0,54,547	0/0:28,0:21:57.09:0,57,567	0/0:12,1:13:6.82:0,7,251	0/0:25,0:25:68.97:0,69,683	0/0:20,0:22:53.93:0,54,525	0/0:12,0:12:33.06:0,33,331	0/0:8,1:8:0.79:0,1,180	0/0:10,1:11:3.88:0,4,220	0/1:4,12:16:22.83:156,0,23	0/1:6,2:8:11.21:11,0,79	1/1:2,13:16:37.90:285,38,0	0/0:15,0:14:27.52:0,28,275	0/1:20,1:17:18.32:18,0,375	0/0:13,1:13:27.04:0,27,268	0/0:14,0:13:30.05:0,30,299	0/0:13,0:12:21.04:0,21,213	0/0:13,0:14:32.82:0,33,304	0/0:16,0:16:44.94:0,45,421	0/0:13,0:13:32.90:0,33,309	0/0:26,0:25:53.93:0,54,521	0/0:17,0:16:42.07:0,42,416	0/0:14,0:13:13.57:0,14,278
chr10	92489861	.	CA	C	2690.31	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-6.308;DP=527;FS=0.423;HRun=13;HaplotypeScore=77.5657;InbreedingCoeff=0.8599;MQ=51.27;MQ0=18;MQRankSum=6.586;QD=9.18;ReadPosRankSum=4.339;VQSLOD=3.0995;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,2:39:27.11:135,27,0	1/1:3,0:7:10.17:30,10,0	0/0:19,0:8:8.98:0,9,79	0/0:10,1:5:0.37:0,0,2	0/0:13,0:30:42.21:0,42,251	0/0:12,0:18:29.10:0,29,189	0/0:4,0:15:10.97:0,11,57	1/1:8,22:30:59.54:436,60,0	0/0:7,0:12:8.64:0,9,48	1/1:8,20:27:1.30:335,1,0	1/1:6,12:17:32.74:240,33,0	1/1:2,9:12:19.92:137,20,0	1/1:10,4:13:17.76:127,18,0	1/1:5,9:15:31.80:223,32,0	1/1:7,1:14:13.15:51,13,0	0/0:2,0:8:8.52:0,9,43	1/1:8,0:19:20.35:59,20,0	1/1:9,23:29:59.56:437,60,0	0/0:10,0:23:49.57:0,50,280	0/0:10,0:20:34.42:0,34,186	0/0:7,0:5:8.39:0,8,43	1/1:5,12:16:32.79:241,33,0	1/1:9,7:16:4.73:179,5,0	1/1:4,3:8:7.99:50,8,0	1/1:2,13:16:15.31:224,15,0	0/0:22,0:31:71.31:0,71,390	0/0:14,0:21:46.57:0,47,282	0/0:6,0:10:19.89:0,20,101
chr10	92490081	.	C	CACAGACAT	13627.40	PASS	AB=0.641;AC=27;AF=0.500;AN=54;BaseQRankSum=2.388;DP=946;FS=7.550;HRun=0;HaplotypeScore=274.7688;InbreedingCoeff=0.8784;MQ=51.11;MQ0=6;MQRankSum=-7.788;QD=28.27;ReadPosRankSum=-4.260;VQSLOD=2.6868;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:34,13:54:4.67:160,5,0	0/0:10,0:10:27.06:0,27,561	0/0:28,0:14:36.12:0,36,554	0/0:48,0:27:50.75:0,51,847	0/0:40,0:40:77.84:0,78,1884	1/1:5,27:32:27.09:1033,27,0	1/1:10,27:38:18.06:548,18,0	1/1:19,0:40:84.25:1646,84,0	0/0:34,0:34:81.26:0,81,1815	1/1:17,12:36:99:2877,99,0	1/1:10,2:20:15.05:308,15,0	1/1:10,12:29:30.10:881,30,0	1/1:14,10:30:50.83:1364,51,0	1/1:4,27:33:3.01:126,3,0	0/0:34,0:34:90.26:0,90,2092	0/1:18,11:40:16.26:1929,0,16	0/0:49,0:48:99:0,120,2805	1/1:17,5:30:29.09:1302,29,0	0/0:25,0:24:51.15:0,51,1116	0/0:33,0:33:78.27:0,78,1873	0/0:70,0:70:99:0,175,4125	1/1:14,5:23:20.92:350,21,0	1/1:11,8:28:18.06:409,18,0	1/1:28,7:45:36.09:695,36,0	./.	0/0:31,0:31:69.22:0,69,1506	0/0:24,0:24:57.11:0,57,1387	0/0:13,0:13:33.11:0,33,808
chr10	92490115	.	CACACACATAG	C	410.48	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=5.158;DP=979;FS=3.421;HRun=0;HaplotypeScore=382.5023;InbreedingCoeff=0.4278;MQ=50.69;MQ0=4;MQRankSum=-5.936;QD=2.08;ReadPosRankSum=-3.019;VQSLOD=0.7907;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,11:42:5.59:30,6,0	0/0:11,0:11:29.82:0,30,1012	0/0:38,0:17:22.41:0,22,253	0/0:30,0:15:23.97:0,24,348	0/0:35,0:35:84.15:0,84,2617	0/0:26,0:26:36.10:0,36,1218	0/0:33,0:33:41.80:0,42,634	1/1:34,0:33:51.86:409,52,0	0/0:39,0:39:99:0,111,4272	0/1:51,0:51:46.17:46,0,2342	0/0:25,0:24:8.07:0,8,645	0/0:39,0:38:11.21:0,11,1601	0/0:21,0:21:14.89:0,15,742	0/0:37,0:37:41.30:0,41,1430	0/0:44,0:44:99:0,117,3681	0/1:38,0:37:2.43:2,0,1036	0/0:52,0:51:99:0,133,4750	0/1:32,0:32:51.02:51,0,1391	0/0:26,0:26:72.07:0,72,1680	0/0:34,0:34:90.22:0,90,2816	0/0:85,0:84:99:0,219,7025	0/0:28,0:28:57.67:0,58,1833	0/0:32,0:32:1.05:0,1,1228	0/0:44,0:43:72.12:0,72,2438	0/0:30,0:30:17.62:0,18,902	0/0:34,0:34:99:0,99,3949	0/0:27,0:27:63.18:0,63,2330	0/0:12,0:12:36.04:0,36,1100
chr10	92490223	.	TAC	T	16004.62	PASS	AB=0.933;AC=37;AF=0.661;AN=56;BaseQRankSum=16.488;DP=1172;FS=3.656;HRun=0;HaplotypeScore=239.7782;InbreedingCoeff=0.9383;MQ=59.42;MQ0=14;MQRankSum=3.061;QD=20.11;ReadPosRankSum=3.531;VQSLOD=4.8209;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,59:78:55.53:742,56,0	1/1:1,10:11:21.07:262,21,0	0/0:56,0:24:14.16:0,14,257	0/0:54,0:28:25.38:0,25,299	0/0:37,0:36:74.90:0,75,1153	1/1:3,28:31:42.13:525,42,0	1/1:15,18:33:56.79:663,57,0	1/1:8,32:38:52.71:846,53,0	0/0:44,0:44:77.61:0,78,1713	1/1:8,45:52:99:1555,129,0	1/1:4,27:31:63.20:788,63,0	1/1:10,44:53:99:1216,100,0	1/1:6,33:39:72.12:900,72,0	1/1:6,30:34:57.18:709,57,0	1/1:5,43:47:93.30:1163,93,0	1/1:6,39:45:43.76:1076,44,0	1/1:11,30:40:65.75:854,66,0	1/1:7,30:38:74.92:920,75,0	0/0:27,0:27:47.93:0,48,699	0/0:35,1:36:46.74:0,47,1228	0/0:91,0:89:99:0,217,3438	1/1:4,28:32:68.25:831,68,0	1/1:3,31:35:69.05:839,69,0	1/1:14,56:69:99:1426,114,0	1/1:7,18:25:57.15:686,57,0	0/1:52,4:56:4.19:4,0,2044	0/0:19,0:19:51.15:0,51,805	0/0:11,0:11:21.07:0,21,341
chr10	92490307	.	TACATAGACAC	T	2265.44	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.118;DP=1076;FS=1.984;HRun=0;HaplotypeScore=333.6613;InbreedingCoeff=0.9996;MQ=61.50;MQ0=9;MQRankSum=-5.063;QD=30.21;ReadPosRankSum=-4.644;VQSLOD=2.0492;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:18,25:43:33.55:561,34,0	0/0:12,0:12:36.12:0,36,1785	0/0:38,0:29:72.24:0,72,2890	0/0:42,0:35:56.07:0,56,2817	0/0:25,0:25:69.24:0,69,3199	0/0:32,0:32:72.25:0,72,3335	0/0:27,0:27:81.28:0,81,3420	1/1:2,30:29:84.06:1826,84,0	0/0:47,0:47:99:0,120,5428	0/0:53,0:52:99:0,148,6442	0/0:27,0:27:72.25:0,72,3387	0/0:46,0:45:99:0,114,5322	0/0:38,0:38:90.69:0,91,4109	0/0:40,0:38:99:0,99,4961	0/0:57,0:57:99:0,160,7345	0/0:41,0:41:99:0,100,4597	0/0:45,0:44:99:0,108,4922	0/0:33,0:33:81.28:0,81,3462	0/0:35,0:35:99:0,102,3582	0/0:45,0:45:99:0,129,5496	0/0:78,0:78:99:0,213,9480	0/0:47,0:47:99:0,109,5185	0/0:31,0:31:75.55:0,76,3420	0/0:54,0:53:99:0,114,5481	0/0:27,0:27:69.24:0,69,3283	0/0:46,0:46:99:0,138,5838	0/0:25,0:25:69.22:0,69,2952	0/0:10,0:10:30.10:0,30,1428
chr10	92490992	.	TACACACAC	T	936.63	PASS	AB=0.982;AC=29;AF=0.725;AN=40;BaseQRankSum=5.039;DP=528;FS=1.272;HRun=0;HaplotypeScore=145.3970;InbreedingCoeff=0.0596;MQ=71.84;MQ0=8;MQRankSum=-3.606;QD=2.68;ReadPosRankSum=-1.809;VQSLOD=2.5959;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:23.72:0,24,383	0/1:9,0:9:0:1,0,0	./.	./.	0/1:12,0:14:0:0,0,0	0/0:16,0:16:9:0,9,111	0/1:19,0:19:21.98:22,0,46	./.	1/1:8,3:11:3.01:74,3,0	0/1:30,0:30:0.29:50,0,0	1/1:11,0:11:2.53:11,3,0	./.	1/1:11,0:11:3:25,3,0	0/1:13,0:13:32.40:47,0,32	1/1:17,2:19:3.01:74,3,0	0/1:11,0:11:25:70,0,25	1/1:29,5:34:2.88:74,3,0	1/1:14,0:14:2.92:56,3,0	./.	1/1:15,0:19:8.95:128,9,0	1/1:44,0:44:3.01:39,3,0	1/1:20,0:20:6.02:106,6,0	./.	0/1:25,0:24:12.09:110,0,12	1/1:21,0:20:6.02:111,6,0	1/1:22,0:25:3.95:56,4,0	./.	./.
chr10	92491033	.	ACACACACACACACG	A	3569.98	PASS	AB=0.996;AC=21;AF=0.375;AN=56;BaseQRankSum=14.291;DP=579;FS=1.242;HRun=0;HaplotypeScore=258.0706;InbreedingCoeff=0.2936;MQ=50.10;MQ0=18;MQRankSum=-2.470;QD=11.37;ReadPosRankSum=0.872;VQSLOD=2.1958;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:41:99:130,0,1058	0/0:7,0:7:17.97:0,18,261	0/0:22,0:8:17.08:0,17,177	0/0:21,0:11:25.12:0,25,225	0/0:19,0:19:26.79:0,27,276	0/1:23,0:23:99:173,0,424	0/1:21,0:21:19.78:20,0,551	1/1:13,6:19:56.80:485,57,0	0/0:11,0:10:18.02:0,18,304	0/1:27,1:27:99:436,0,122	0/1:16,0:16:25.94:61,0,26	1/1:14,0:13:17.90:141,18,0	1/1:18,0:18:41.36:334,41,0	1/1:15,1:16:6.49:257,6,0	0/0:15,0:15:30.05:0,30,521	0/1:15,0:15:60.47:60,0,337	0/0:28,0:28:64.23:0,64,991	0/1:21,0:21:19.96:283,0,20	0/0:15,0:14:37.76:0,38,448	0/0:25,0:24:34.43:0,34,470	0/0:49,0:48:90.93:0,91,1284	0/1:19,0:19:99:272,0,116	1/1:11,0:11:20.96:171,21,0	0/1:38,0:37:41.01:428,0,41	1/1:14,0:13:27:319,27,0	0/0:23,0:23:61.37:0,61,600	0/0:18,0:17:50.27:0,50,518	0/0:12,0:11:26.82:0,27,300
chr10	92491035	.	ACACACACACACG	A	4558.55	PASS	AB=0.986;AC=26;AF=0.464;AN=56;BaseQRankSum=14.287;DP=547;FS=14.718;HRun=0;HaplotypeScore=231.7020;InbreedingCoeff=0.5522;MQ=52.52;MQ0=18;MQRankSum=-1.714;QD=14.34;ReadPosRankSum=-0.629;VQSLOD=1.9179;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:40:99:156,0,695	0/0:7,0:7:8.49:0,8,102	0/0:24,0:10:23.07:0,23,227	0/0:21,0:11:24.64:0,25,223	0/0:17,0:17:22.32:0,22,163	0/1:24,0:24:99:195,0,286	0/1:21,0:21:23.89:24,0,314	1/1:21,0:21:62.65:495,63,0	0/0:11,0:10:17.09:0,17,151	1/1:18,0:17:50.73:473,51,0	1/1:13,2:15:11.97:141,12,0	1/1:13,1:13:23.89:189,24,0	1/1:17,1:18:44.35:403,44,0	1/1:14,0:14:32.18:357,32,0	0/0:14,0:14:32.17:0,32,316	0/1:15,0:15:81.02:81,0,162	0/0:28,0:28:63.29:0,63,617	1/1:17,1:18:12.27:397,12,0	0/0:14,0:13:37.74:0,38,329	0/1:23,0:22:55.24:55,0,318	0/0:43,0:42:13.01:0,13,706	1/1:17,2:19:29.98:425,30,0	1/1:11,0:11:23.96:196,24,0	0/1:31,3:33:9.75:564,0,10	1/1:11,2:12:27:409,27,0	0/0:22,0:22:21.83:0,22,410	0/0:17,0:16:41.85:0,42,354	0/0:11,0:10:26.73:0,27,191
chr10	92491041	.	ACACACG	A	5056.05	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=15.701;DP=539;FS=27.388;HRun=0;HaplotypeScore=184.7083;InbreedingCoeff=0.8451;MQ=61.61;MQ0=17;MQRankSum=-3.586;QD=15.75;ReadPosRankSum=0.084;VQSLOD=2.6084;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,5:37:14.56:341,15,0	0/0:3,0:3:8.93:0,9,64	0/0:27,0:13:25.21:0,25,267	0/0:27,0:17:41.70:0,42,348	0/0:17,0:17:26.71:0,27,189	1/1:14,7:21:47.89:390,48,0	1/1:14,3:17:27.60:338,28,0	1/1:24,0:24:68.65:539,69,0	0/1:12,0:11:8.31:8,0,128	1/1:20,1:20:59.63:491,60,0	1/1:14,0:14:11.91:88,12,0	1/1:11,2:13:26.89:214,27,0	1/1:15,3:18:44.53:342,45,0	1/1:13,0:13:26.45:224,26,0	0/0:13,0:13:0.75:0,1,181	1/1:8,3:11:23.96:306,24,0	0/0:25,0:25:29.53:0,30,353	1/1:13,5:18:47.76:396,48,0	0/0:15,0:14:39.92:0,40,304	0/1:23,0:22:1.19:1,0,321	0/0:41,0:40:91.36:0,91,743	1/1:10,6:16:32.99:329,33,0	1/1:11,1:12:25.51:200,26,0	1/1:26,10:35:53.24:488,53,0	1/1:11,4:14:35.98:361,36,0	0/0:23,0:23:34.92:0,35,456	0/0:16,0:15:44.72:0,45,338	0/0:11,0:10:26.73:0,27,191
chr10	92491074	.	T	TTGC	19906.09	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=11.115;DP=660;FS=0.963;HRun=0;HaplotypeScore=149.1600;InbreedingCoeff=0.9997;MQ=89.04;MQ0=0;MQRankSum=-11.352;QD=55.14;ReadPosRankSum=0.310;VQSLOD=5.9656;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:35:99:2142,99,0	0/0:10,0:10:27.09:0,27,441	0/0:28,0:27:78.26:0,78,1230	0/0:32,0:31:90.03:0,90,1372	0/0:22,0:22:66.22:0,66,1056	1/1:2,20:23:63.22:1384,63,0	1/1:3,11:16:27.09:602,27,0	1/1:7,28:36:90.30:1954,90,0	0/0:17,0:17:45.15:0,45,729	1/1:5,19:24:63.22:1401,63,0	1/1:2,23:26:69.24:1503,69,0	1/1:3,19:22:57.19:1230,57,0	1/1:4,17:23:51.18:1124,51,0	1/1:4,16:20:48.16:1039,48,0	0/0:21,0:21:48.16:0,48,784	1/1:1,17:18:51.17:1104,51,0	0/0:23,0:23:60.20:0,60,980	1/1:0,19:19:51.18:1139,51,0	0/0:16,0:16:45.15:0,45,735	0/0:23,0:23:60.20:0,60,977	0/0:46,0:46:99:0,135,2192	1/1:2,26:28:81.28:1742,81,0	1/1:1,16:18:45.13:962,45,0	1/1:3,32:35:66.23:1472,66,0	1/1:1,17:18:51.17:1108,51,0	0/0:25,0:25:75.26:0,75,1225	0/0:23,0:23:66.23:0,66,1078	0/0:13,0:13:39.13:0,39,632
chr10	92492751	.	AC	A	1502.01	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.650;DP=660;FS=0.593;HRun=2;HaplotypeScore=82.6625;InbreedingCoeff=0.9840;MQ=81.33;MQ0=0;MQRankSum=-3.594;QD=32.65;ReadPosRankSum=2.726;VQSLOD=3.6528;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,43:46:99:1597,123,0	0/0:12,0:12:36.12:0,36,539	0/0:22,0:22:53.45:0,53,701	0/0:14,0:14:36.12:0,36,538	0/0:14,0:14:42.13:0,42,608	0/0:25,0:25:75.25:0,75,1123	0/0:36,0:36:99:0,105,1532	0/0:24,0:24:48.15:0,48,690	0/0:27,0:27:78.26:0,78,1169	0/0:23,0:23:66.20:0,66,918	0/0:15,0:15:42.13:0,42,598	0/0:26,0:26:75.25:0,75,1122	0/0:17,0:17:48.16:0,48,715	0/0:25,0:25:72.22:0,72,1040	0/0:23,0:23:69.23:0,69,1015	0/0:31,0:31:90.30:0,90,1330	0/0:47,0:47:99:0,141,2100	0/0:27,0:27:81.27:0,81,1213	0/0:23,0:23:66.21:0,66,968	0/0:15,0:15:45.15:0,45,666	0/0:34,0:34:96.28:0,96,1412	0/0:20,0:20:60.19:0,60,878	0/0:13,0:13:36.12:0,36,539	0/0:31,0:31:91.82:0,92,1327	0/0:27,0:27:81.26:0,81,1176	0/0:21,0:21:57.18:0,57,834	0/0:17,0:17:51.16:0,51,745	0/0:5,0:5:15.04:0,15,205
chr10	92493146	.	G	GATATAT	409.16	PASS	AB=0.885;AC=8;AF=0.148;AN=54;BaseQRankSum=-0.518;DP=304;FS=5.140;HRun=0;HaplotypeScore=88.8085;InbreedingCoeff=0.4303;MQ=79.19;MQ0=0;MQRankSum=-3.642;QD=18.60;ReadPosRankSum=-0.821;VQSLOD=2.4150;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.20:0,66,1447	./.	0/0:10,0:10:8.86:0,9,69	0/0:6,0:6:2.48:0,2,14	0/0:4,0:4:12.01:0,12,146	1/1:3,0:4:2.03:96,2,0	0/1:5,0:5:0.04:0,0,0	0/0:35,0:35:92.66:0,93,1916	0/0:5,0:5:15.02:0,15,197	0/0:20,0:20:60.16:0,60,1337	0/0:14,0:14:33.11:0,33,783	0/0:16,0:16:42.10:0,42,807	0/0:13,0:13:27.05:0,27,516	0/0:19,0:19:54.17:0,54,1127	1/1:1,1:2:3.01:99,3,0	1/1:1,0:1:3:25,3,0	0/1:7,3:10:98.51:302,0,99	0/0:27,0:27:72.13:0,72,1432	0/0:5,0:5:2.87:0,3,89	0/0:3,0:3:5.73:0,6,49	0/0:4,0:4:12.03:0,12,171	0/0:13,0:13:36.12:0,36,823	0/0:15,0:15:39.13:0,39,854	0/0:14,0:14:42.09:0,42,807	0/0:27,0:27:81.28:0,81,1887	0/0:3,0:3:6.01:0,6,79	0/0:5,0:5:9.03:0,9,145	0/0:1,0:1:2.97:0,3,20
chr10	92493163	.	ATC	A	6871.30	PASS	AB=0.933;AC=41;AF=0.788;AN=52;BaseQRankSum=0.702;DP=329;FS=2.124;HRun=0;HaplotypeScore=51.8254;InbreedingCoeff=0.5756;MQ=83.19;MQ0=0;MQRankSum=-1.380;QD=25.54;ReadPosRankSum=2.583;VQSLOD=5.0823;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:59.52:0,60,998	1/1:2,0:2:3:25,3,0	0/0:8,0:8:20.97:0,21,181	0/0:14,0:14:6.43:0,6,100	1/1:7,0:7:17.98:148,18,0	0/0:3,0:3:2.50:0,2,9	./.	1/1:2,35:37:99:1224,108,0	1/1:1,0:1:3:25,3,0	1/1:2,16:18:51.14:679,51,0	1/1:2,14:16:30.08:399,30,0	1/1:1,11:12:24.08:334,24,0	1/1:0,13:13:18.06:251,18,0	1/1:2,15:17:36.12:501,36,0	1/1:7,0:7:1.91:85,2,0	./.	0/1:13,1:14:23.83:113,0,24	1/1:2,21:23:48.14:649,48,0	0/0:1,0:1:0.47:0,0,1	1/1:10,0:10:17.98:149,18,0	1/1:2,0:2:5.99:48,6,0	1/1:5,11:16:27.05:338,27,0	1/1:2,15:17:33.06:421,33,0	1/1:1,18:19:30.07:398,30,0	1/1:1,25:26:66.22:920,66,0	1/1:3,0:3:5.97:47,6,0	1/1:6,0:6:12.45:99,12,0	1/1:3,0:3:2.96:19,3,0
chr10	92493165	.	C	CTA	219.31	PASS	AB=1.000;AC=18;AF=0.346;AN=52;BaseQRankSum=1.159;DP=337;FS=6.869;HRun=0;HaplotypeScore=77.5354;InbreedingCoeff=0.5650;MQ=84.97;MQ0=0;MQRankSum=-1.987;QD=2.96;ReadPosRankSum=-3.766;VQSLOD=-0.2805;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.21:0,72,1035	0/0:2,0:2:0:0,0,0	0/0:9,0:9:21.01:0,21,265	0/1:15,0:15:3.34:3,0,181	1/1:9,0:9:0.23:1,0,0	1/1:0,2:2:3.01:49,3,0	./.	0/0:38,0:38:69.44:0,69,345	1/1:2,0:2:3.47:26,3,0	0/0:17,0:17:44.69:0,45,210	0/0:17,0:17:27.86:0,28,130	0/0:12,0:12:22.38:0,22,106	0/0:13,0:13:16.79:0,17,79	0/0:16,0:16:36.64:0,37,183	1/1:7,0:7:4.94:49,5,0	./.	0/1:16,0:16:7.64:132,0,8	0/0:25,0:25:47.64:0,48,234	0/1:3,0:3:0:0,0,0	1/1:9,0:9:5.80:50,6,0	1/1:2,0:2:2.96:24,3,0	0/0:14,0:14:24.94:0,25,115	0/0:17,0:17:30.54:0,31,141	0/0:19,0:19:27.86:0,28,130	0/0:27,0:27:64.54:0,65,313	0/1:3,0:3:0.01:0,0,0	1/1:6,0:6:3.34:25,3,0	0/0:2,0:2:0:0,0,0
chr10	92493770	.	T	TG	821.04	PASS	AB=0.850;AC=9;AF=0.161;AN=56;BaseQRankSum=0.669;DP=507;FS=34.462;HRun=0;HaplotypeScore=80.5847;InbreedingCoeff=-0.0117;MQ=47.20;MQ0=90;MQRankSum=5.464;QD=4.32;ReadPosRankSum=4.248;VQSLOD=1.6714;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:33:76.50:0,76,534	0/0:5,0:5:14.90:0,15,117	0/0:24,0:4:2.09:0,2,28	0/0:12,0:3:2.22:0,2,46	0/1:17,13:29:99:170,0,104	0/0:14,0:13:26.69:0,27,201	0/0:9,0:8:17.65:0,18,127	0/0:15,0:13:30.82:0,31,230	0/1:15,0:14:8.67:123,0,9	0/0:25,0:19:39.46:0,39,291	0/0:18,0:10:9.56:0,10,56	0/0:9,0:7:8.94:0,9,68	0/0:6,0:5:8.15:0,8,53	0/0:19,0:17:15.56:0,16,110	0/0:10,0:10:8.07:0,8,39	0/0:13,0:11:24.21:0,24,184	0/0:25,0:17:26.99:0,27,201	0/0:20,0:12:12.44:0,12,81	0/1:27,0:21:44.46:198,0,44	0/1:14,12:25:69.47:69,0,83	1/1:21,0:13:6.49:99,6,0	0/0:12,0:12:7.10:0,7,116	0/0:12,0:11:20.57:0,21,143	0/0:16,0:9:15:0,15,131	0/0:16,0:12:18.29:0,18,146	0/1:26,2:23:42.45:255,0,42	0/1:11,15:22:20.04:20,0,51	0/1:17,0:8:24.04:24,0,58
chr10	92494141	.	CACACACACACACAGAG	C	3703.39	PASS	AB=0.529;AC=15;AF=0.278;AN=54;BaseQRankSum=-0.099;DP=695;FS=5.475;HRun=0;HaplotypeScore=244.2131;InbreedingCoeff=0.6932;MQ=48.04;MQ0=20;MQRankSum=-2.788;QD=25.54;ReadPosRankSum=1.294;VQSLOD=2.3535;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:8.30:0,8,164	0/0:6,0:6:6.02:0,6,162	0/0:47,0:7:20.78:0,21,374	0/0:50,0:11:23.56:0,24,586	0/0:19,0:19:12.64:0,13,83	0/0:23,0:23:16.75:0,17,162	0/0:22,0:21:12.02:0,12,164	0/0:33,0:30:50.20:0,50,411	0/0:21,0:20:13.17:0,13,187	1/1:1,13:14:33.06:848,33,0	1/1:12,3:15:15.21:218,15,0	1/1:2,22:24:18.53:578,19,0	1/1:1,29:31:14.39:1059,14,0	1/1:3,15:18:3.01:86,3,0	0/0:24,0:24:8.95:0,9,111	0/0:18,0:18:14.45:0,14,264	0/0:32,0:32:17.22:0,17,489	0/1:2,16:18:48.73:735,0,49	0/0:14,0:14:34.18:0,34,425	0/0:20,0:20:2.97:0,3,20	0/0:59,0:59:61.99:0,62,818	./.	1/1:0,12:12:3.01:92,3,0	0/0:2,28:30:0:0,0,0	1/1:3,10:13:3.01:88,3,0	0/0:29,0:28:61.90:0,62,875	0/0:17,0:17:19.31:0,19,300	0/0:9,0:9:24.03:0,24,419
chr10	92494145	.	CACACACACAG	C	4993.55	PASS	AB=0.978;AC=37;AF=0.712;AN=52;BaseQRankSum=4.890;DP=696;FS=1.600;HRun=0;HaplotypeScore=210.7863;InbreedingCoeff=0.1800;MQ=48.05;MQ0=20;MQRankSum=0.438;QD=9.83;ReadPosRankSum=3.139;VQSLOD=3.9067;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:52,0:52:15.53:103,0,16	0/0:5,0:5:3.90:0,4,50	0/0:48,0:6:17.97:0,18,235	0/0:56,0:12:26.71:0,27,325	1/1:20,0:20:8.41:97,8,0	0/1:20,3:23:13.07:229,0,13	0/1:22,1:22:19.66:34,0,20	1/1:5,25:27:80.18:968,80,0	0/1:21,0:20:12.93:115,0,13	1/1:13,0:13:29.83:316,30,0	1/1:16,0:16:18.21:146,18,0	1/1:23,0:23:14.06:163,14,0	1/1:30,0:30:23.97:492,24,0	1/1:17,0:17:2.80:13,3,0	0/0:25,0:25:5.83:0,6,46	1/1:17,1:18:10.46:95,10,0	0/1:32,0:32:16.96:17,0,82	0/1:18,0:17:31.37:333,0,31	1/1:13,1:14:23.10:262,23,0	1/1:18,2:20:3.01:89,3,0	0/1:59,0:59:7.90:346,0,8	./.	1/1:12,0:12:2.96:19,3,0	./.	1/1:11,0:11:2.88:15,3,0	1/1:30,1:30:63.07:707,63,0	1/1:18,1:18:23.48:323,23,0	1/1:6,0:6:2.69:112,3,0
chr10	92494147	.	CACACACAG	C	6043.35	PASS	AB=0.838;AC=41;AF=0.788;AN=52;BaseQRankSum=3.068;DP=692;FS=2.849;HRun=0;HaplotypeScore=199.2788;InbreedingCoeff=0.2637;MQ=49.79;MQ0=20;MQRankSum=0.595;QD=11.80;ReadPosRankSum=3.703;VQSLOD=3.7026;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,41:52:15.12:115,0,15	0/1:5,0:5:17.97:18,0,18	0/0:51,0:8:23.77:0,24,237	0/0:57,0:14:23.02:0,23,261	1/1:4,14:18:4.75:98,5,0	1/1:4,19:23:8.89:218,9,0	1/1:3,20:22:6.02:125,6,0	1/1:30,0:27:63.08:524,63,0	1/1:2,19:20:9.03:260,9,0	1/1:13,0:13:29.36:264,29,0	1/1:15,0:15:18.25:145,18,0	1/1:23,0:23:10.04:106,10,0	1/1:30,0:30:20.34:376,20,0	0/0:17,0:17:0.27:0,0,1	1/1:23,1:24:2.73:24,3,0	1/1:2,16:18:12.04:281,12,0	0/1:31,1:32:23.95:110,0,24	0/1:18,0:17:20.37:262,0,20	1/1:12,2:14:34.58:397,35,0	1/1:2,18:20:3.01:54,3,0	1/1:54,2:56:59.62:616,60,0	./.	1/1:12,0:12:1.82:5,2,0	./.	1/1:11,0:11:0.47:1,0,0	1/1:3,26:28:84.05:1196,84,0	1/1:3,16:19:23.44:562,23,0	0/1:3,3:6:1.86:287,0,2
chr10	92494149	.	CACACAG	C	4552.76	PASS	AB=1.000;AC=43;AF=0.827;AN=52;BaseQRankSum=2.230;DP=677;FS=9.322;HRun=0;HaplotypeScore=193.5113;InbreedingCoeff=0.4573;MQ=50.05;MQ0=19;MQRankSum=0.598;QD=9.33;ReadPosRankSum=2.917;VQSLOD=3.2177;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:49,1:50:4.49:73,4,0	1/1:0,4:4:3.01:70,3,0	0/0:51,0:8:23.71:0,24,225	0/0:55,0:16:21.68:0,22,266	1/1:18,0:18:5.79:64,6,0	1/1:22,0:22:8.90:156,9,0	1/1:22,0:21:5.95:70,6,0	1/1:29,0:27:35.94:393,36,0	1/1:20,0:19:8.74:157,9,0	1/1:13,0:13:28.38:232,28,0	1/1:14,0:14:17.82:144,18,0	1/1:23,0:23:9.85:67,10,0	1/1:30,0:30:19.59:277,20,0	0/0:17,0:17:0.41:0,0,1	1/1:1,22:23:2.75:24,3,0	1/1:18,0:18:11.93:144,12,0	1/1:5,26:31:15.03:315,15,0	0/1:18,0:17:14.78:194,0,15	1/1:14,0:14:35.49:354,35,0	1/1:20,0:20:3.01:40,3,0	1/1:53,0:53:57.91:477,58,0	./.	1/1:12,0:12:0.47:1,0,0	./.	0/0:11,0:11:0.47:0,0,1	1/1:29,0:28:79.30:800,79,0	1/1:19,0:18:23.62:343,24,0	1/1:6,0:6:0.88:156,1,0
chr10	92494422	.	AT	A	4163.26	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-7.683;DP=542;FS=11.136;HRun=10;HaplotypeScore=86.2038;InbreedingCoeff=0.9584;MQ=72.47;MQ0=0;MQRankSum=0.022;QD=22.14;ReadPosRankSum=1.224;VQSLOD=3.7558;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:36:88.09:0,88,447	0/0:5,0:5:15.04:0,15,166	0/0:12,0:12:2.80:0,3,158	0/0:12,0:12:22.76:0,23,176	0/0:6,0:26:54.37:0,54,276	0/0:1,0:23:66.11:0,66,344	0/0:3,0:16:37.24:0,37,187	0/0:34,1:35:64.18:0,64,929	0/0:3,0:19:37.37:0,37,193	1/1:2,21:23:62.98:547,63,0	1/1:2,25:27:71.98:625,72,0	1/1:1,20:21:56.99:495,57,0	1/1:2,14:16:16.71:336,17,0	1/1:1,17:18:47.98:415,48,0	0/0:29,0:29:78.21:0,78,863	0/0:3,0:10:23.08:0,23,126	0/0:21,0:22:60:0,60,645	1/1:3,16:19:41.99:365,42,0	0/0:4,0:19:43.23:0,43,232	0/0:5,0:36:88.86:0,89,461	0/0:2,0:7:19.94:0,20,98	1/1:3,14:17:38.98:339,39,0	1/1:2,20:21:56.98:495,57,0	1/1:0,13:13:32.99:286,33,0	1/1:2,10:12:29.98:260,30,0	0/0:2,0:21:54.67:0,55,285	0/0:4,0:22:51.68:0,52,263	0/0:0,0:4:8.56:0,9,43
chr10	92498838	.	A	ACC	1890.16	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=10.911;DP=532;FS=1.780;HRun=2;HaplotypeScore=112.4390;InbreedingCoeff=0.9610;MQ=69.47;MQ0=2;MQRankSum=-9.651;QD=30.99;ReadPosRankSum=1.805;VQSLOD=3.8017;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:15:42.12:565,42,0	./.	0/0:28,0:27:75.24:0,75,1156	0/0:30,0:29:44.83:0,45,1137	0/0:17,0:17:48.16:0,48,783	0/0:22,0:22:63.20:0,63,995	0/0:36,0:36:99:0,108,1752	1/1:0,10:10:27.06:349,27,0	0/0:28,0:28:84.29:0,84,1365	0/0:9,0:9:27.09:0,27,441	0/0:10,0:10:21.02:0,21,286	0/0:24,0:24:69.19:0,69,1078	0/0:13,0:13:39.10:0,39,607	0/0:17,0:16:48.14:0,48,756	1/1:0,16:16:48.16:642,48,0	0/0:18,0:18:54.17:0,54,855	1/1:2,15:17:36.12:492,36,0	0/0:20,0:20:60.20:0,60,978	0/0:15,0:14:35.81:0,36,557	0/0:18,0:18:54.18:0,54,879	0/0:39,0:39:99:0,117,1859	0/0:4,0:4:6.02:0,6,95	0/0:5,0:5:12.04:0,12,195	0/0:35,0:35:99:0,102,1663	0/0:14,0:14:39.12:0,39,611	0/0:23,0:23:69.24:0,69,1126	0/0:35,0:35:99:0,105,1713	0/0:10,0:10:27.09:0,27,420
chr10	92498841	.	TAGTGA	T	1032.54	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=11.311;DP=538;FS=4.404;HRun=0;HaplotypeScore=149.1139;InbreedingCoeff=0.9387;MQ=70.23;MQ0=1;MQRankSum=-10.885;QD=17.21;ReadPosRankSum=2.638;VQSLOD=3.2492;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:14:38.92:329,39,0	./.	0/0:30,0:29:87.30:0,87,2761	0/0:32,0:32:95.80:0,96,2566	0/0:17,0:17:48.16:0,48,1569	0/0:21,0:21:63.22:0,63,2087	0/0:39,0:39:99:0,117,3678	1/1:2,10:10:21.04:210,21,0	0/0:29,0:29:87.28:0,87,2656	0/0:9,0:9:27.09:0,27,816	0/0:9,0:9:15.05:0,15,488	0/0:25,0:25:69.24:0,69,2280	0/0:14,0:14:36.12:0,36,1089	0/0:15,0:15:45.14:0,45,1414	1/1:1,16:17:50.66:383,51,0	0/0:17,0:17:51.16:0,51,1488	1/1:1,15:16:32.57:268,33,0	0/0:21,0:21:63.22:0,63,1940	0/0:15,0:15:42.14:0,42,1343	0/0:17,0:17:51.18:0,51,1644	0/0:39,0:39:99:0,117,3840	0/0:3,0:3:3.01:0,3,99	0/0:7,0:7:12.04:0,12,397	0/0:36,0:36:99:0,105,3433	0/0:15,0:15:45.15:0,45,1450	0/0:23,0:23:69.24:0,69,2168	0/0:34,0:34:99:0,102,3111	0/0:10,0:10:27.09:0,27,812
chr10	92498847	.	G	GC	1118.79	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.807;DP=571;FS=6.042;HRun=0;HaplotypeScore=117.8426;InbreedingCoeff=0.9268;MQ=70.15;MQ0=1;MQRankSum=-11.957;QD=12.16;ReadPosRankSum=-0.110;VQSLOD=4.5016;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:17:43.61:265,44,0	1/1:1,1:1:2.98:21,3,0	0/0:30,0:29:84.20:0,84,1174	0/0:30,0:30:84.71:0,85,1149	0/0:20,0:20:54.17:0,54,731	0/0:21,0:21:63.21:0,63,881	0/0:42,0:42:99:0,123,1719	1/1:13,10:20:38.19:267,38,0	0/0:25,0:25:72.24:0,72,1006	0/0:10,0:10:30.07:0,30,400	0/0:8,0:8:15.05:0,15,210	0/0:23,0:23:69.23:0,69,960	0/0:14,0:14:33.11:0,33,453	0/0:15,0:15:45.15:0,45,629	1/1:8,16:24:63.82:382,64,0	0/0:15,0:15:45.12:0,45,595	1/1:10,15:25:54.85:351,55,0	0/0:24,0:24:69.19:0,69,937	0/0:15,0:15:42.14:0,42,584	0/0:16,0:16:48.13:0,48,648	0/0:41,0:41:99:0,123,1703	0/0:5,0:5:6.02:0,6,83	0/0:8,0:8:15.05:0,15,209	0/0:38,0:38:99:0,111,1530	0/0:15,0:15:45.15:0,45,621	0/0:21,0:21:63.20:0,63,865	0/0:33,0:33:96.32:0,96,1339	0/0:10,0:10:27.04:0,27,323
chr10	92499116	.	T	TG	6727.95	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=6.285;DP=373;FS=2.569;HRun=4;HaplotypeScore=57.1368;InbreedingCoeff=0.9819;MQ=55.01;MQ0=17;MQRankSum=-0.170;QD=34.86;ReadPosRankSum=0.417;VQSLOD=5.3477;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,28:30:78.26:1061,78,0	1/1:0,4:4:12.04:164,12,0	0/0:8,0:7:14.98:0,15,154	0/0:9,0:8:20.97:0,21,221	1/1:0,14:13:30.09:397,30,0	0/0:14,0:14:42.01:0,42,436	0/0:17,0:17:41.98:0,42,432	1/1:2,16:18:48.16:656,48,0	1/1:0,8:8:24.08:328,24,0	0/0:14,0:13:39.11:0,39,442	0/0:12,0:12:27.07:0,27,303	0/0:8,0:8:15.04:0,15,170	0/0:7,0:5:15.04:0,15,170	0/0:6,0:5:12.03:0,12,136	1/1:3,9:11:30.10:405,30,0	0/0:9,0:9:23.98:0,24,246	1/1:1,23:23:69.23:941,69,0	0/0:24,0:21:51.14:0,51,573	1/1:2,14:15:45.14:595,45,0	1/1:3,12:15:39.13:526,39,0	1/1:0,13:13:36.12:483,36,0	0/0:12,0:11:24.07:0,24,272	0/0:10,0:10:27.08:0,27,304	0/0:15,0:15:39.11:0,39,442	0/0:15,0:14:39.11:0,39,442	1/1:6,10:12:30.09:392,30,0	1/1:1,13:13:39.13:533,39,0	1/1:1,6:7:18.06:246,18,0
chr10	92500103	.	A	AC	16856.24	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-16.073;DP=750;FS=1.167;HRun=1;HaplotypeScore=72.2098;InbreedingCoeff=0.9903;MQ=88.73;MQ0=0;MQRankSum=-5.177;QD=41.21;ReadPosRankSum=1.899;VQSLOD=5.4674;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1324	1/1:0,5:5:14.97:197,15,0	0/0:34,0:34:99:0,99,1183	0/0:20,0:20:57.12:0,57,694	1/1:1,25:26:75.25:1124,75,0	1/1:0,14:14:33.11:494,33,0	1/1:0,26:26:66.22:989,66,0	1/1:2,30:32:93.30:1365,93,0	1/1:2,23:25:66.22:989,66,0	0/0:32,0:32:93.22:0,93,1185	0/0:21,0:21:57.19:0,57,740	0/0:23,0:23:69.21:0,69,881	0/0:29,0:29:87.27:0,87,1112	0/0:20,0:20:60.20:0,60,778	1/1:1,22:23:57.19:849,57,0	1/1:1,29:30:87.29:1304,87,0	1/1:0,41:41:99:1753,117,0	0/0:13,0:13:39.13:0,39,505	1/1:1,27:28:81.21:1141,81,0	1/1:0,32:32:93.22:1342,93,0	1/1:0,38:38:99:1663,111,0	0/0:25,0:25:75.24:0,75,962	0/0:31,0:31:93.27:0,93,1178	0/0:36,0:36:99:0,108,1402	0/0:21,0:21:63.20:0,63,811	1/1:3,27:30:9.37:1131,9,0	1/1:0,30:30:84.28:1258,84,0	1/1:1,28:29:84.28:1259,84,0
chr10	92500592	.	C	CATAATA	4399.53	PASS	AB=0.963;AC=21;AF=0.389;AN=54;BaseQRankSum=-0.021;DP=339;FS=0.000;HRun=0;HaplotypeScore=73.1878;InbreedingCoeff=0.7675;MQ=68.79;MQ0=0;MQRankSum=-5.582;QD=25.88;ReadPosRankSum=-3.788;VQSLOD=3.4805;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:16:18.04:190,18,0	0/0:5,0:5:3.01:0,3,44	./.	0/0:9,0:8:2.94:0,3,18	1/1:8,9:17:21.02:464,21,0	0/0:17,0:17:39.02:0,39,682	0/0:14,0:14:30.10:0,30,604	1/1:34,0:34:43.84:756,44,0	1/1:3,3:6:15.05:372,15,0	0/0:23,0:23:39.11:0,39,748	0/0:13,0:13:30.08:0,30,555	0/0:18,0:18:30.09:0,30,581	0/0:5,0:5:9.03:0,9,178	0/0:6,0:6:12.04:0,12,252	0/0:3,0:3:9.03:0,9,126	0/0:6,0:6:9.03:0,9,189	0/1:25,0:26:42.73:43,0,658	0/0:9,0:11:24.06:0,24,445	1/1:10,5:15:18.04:417,18,0	1/1:6,4:10:12.04:370,12,0	1/1:4,1:5:3.01:99,3,0	0/0:4,0:4:6.02:0,6,126	0/0:9,0:9:12.02:0,12,200	0/0:6,0:6:6.02:0,6,115	0/0:14,0:14:36.11:0,36,719	1/1:5,8:14:33.10:791,33,0	1/1:12,6:18:15.05:424,15,0	1/1:4,5:9:18.06:474,18,0
chr10	92501210	.	CGT	C	664.02	PASS	AB=0.989;AC=21;AF=0.404;AN=52;BaseQRankSum=1.391;DP=633;FS=2.554;HRun=0;HaplotypeScore=90.4239;InbreedingCoeff=-0.1652;MQ=56.68;MQ0=7;MQRankSum=0.603;QD=1.68;ReadPosRankSum=-1.137;VQSLOD=1.8583;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:53.91:0,54,509	0/0:10,0:10:5.59:0,6,45	./.	0/1:29,0:9:0:0,0,0	0/1:17,0:17:9.91:10,0,19	0/1:15,0:15:0.31:15,0,0	1/1:25,1:27:13.88:253,14,0	./.	0/1:16,0:16:3.20:3,0,37	0/0:33,0:32:53.18:0,53,560	0/1:12,0:12:18.34:18,0,39	0/1:20,0:21:15.97:16,0,234	0/1:15,0:15:8.45:8,0,160	0/1:23,0:24:16.24:16,0,253	0/0:14,0:14:14.77:0,15,123	1/1:7,1:8:3.01:31,3,0	0/0:16,0:16:11.48:0,11,72	0/1:28,1:29:17:17,0,474	0/1:20,1:20:26.55:27,0,59	0/1:11,0:11:15.35:15,0,17	0/1:48,0:48:83.62:84,0,104	0/0:14,0:14:15.04:0,15,176	0/0:16,0:16:1.59:0,2,201	0/0:36,2:38:10.22:0,10,563	0/1:29,0:29:42.21:42,0,322	0/1:35,0:34:60.87:61,0,145	0/1:14,0:14:54.54:55,0,120	1/1:24,0:24:5.24:142,5,0
chr10	92501865	.	C	CCCAT	6328.63	PASS	AB=0.791;AC=25;AF=0.481;AN=52;BaseQRankSum=-8.469;DP=786;FS=0.500;HRun=0;HaplotypeScore=166.4763;InbreedingCoeff=0.8040;MQ=67.04;MQ0=13;MQRankSum=0.425;QD=16.88;ReadPosRankSum=-2.031;VQSLOD=4.1241;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:9.03:0,9,133	0/0:15,0:15:27.08:0,27,394	./.	./.	0/0:12,0:23:21.48:0,21,191	1/1:20,0:20:24.05:340,24,0	1/1:18,0:18:12.03:153,12,0	0/1:34,0:34:0.01:0,0,0	0/0:8,0:19:36.04:0,36,335	1/1:20,7:29:27.04:468,27,0	1/1:9,11:22:26.96:629,27,0	1/1:6,11:17:18.06:419,18,0	1/1:12,13:25:33.11:751,33,0	1/1:16,12:29:21.07:485,21,0	0/0:34,0:34:51.17:0,51,773	1/1:21,1:37:39.13:635,39,0	0/0:35,0:36:57.19:0,57,843	1/1:13,13:26:24.08:560,24,0	0/0:20,0:25:24.04:0,24,240	0/0:16,0:19:16.45:0,16,126	0/0:32,0:46:24.01:0,24,216	1/1:12,12:25:23.86:547,24,0	1/1:10,11:22:9.50:210,10,0	0/1:21,22:42:6.82:801,0,7	0/1:16,11:27:27.90:330,0,28	0/0:21,0:29:32.91:0,33,271	0/0:11,0:18:26.20:0,26,221	0/0:17,0:22:14.98:0,15,130
chr10	92501908	.	ATCCATCTCTCC	A	2646.85	PASS	AB=0.978;AC=12;AF=0.214;AN=56;BaseQRankSum=3.920;DP=821;FS=5.865;HRun=0;HaplotypeScore=304.8908;InbreedingCoeff=-0.1049;MQ=55.66;MQ0=15;MQRankSum=-6.060;QD=9.59;ReadPosRankSum=-1.398;VQSLOD=0.9886;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:7.10:0,7,286	0/0:15,0:15:39.13:0,39,1687	0/0:25,0:9:20.28:0,20,597	0/0:37,0:24:66.58:0,67,1720	0/1:23,0:23:99:137,0,212	0/1:24,4:28:99:438,0,1636	0/1:18,2:20:99:206,0,1060	0/0:34,0:31:7.70:0,8,616	0/1:23,0:22:99:446,0,333	0/0:23,0:23:4.80:0,5,1317	0/0:30,0:30:27.01:0,27,2114	0/0:31,0:31:70.17:0,70,2194	0/0:39,0:39:96.31:0,96,3124	0/0:24,0:24:40.06:0,40,1330	0/0:39,0:39:99:0,99,4100	0/1:31,0:31:99:104,0,1845	0/0:43,0:43:99:0,123,4769	0/0:28,0:28:55.64:0,56,1858	0/1:31,0:28:99:301,0,601	0/1:24,0:24:49.69:50,0,249	0/1:38,0:37:99:172,0,350	0/0:34,0:33:72.77:0,73,2416	0/0:25,0:25:47.75:0,48,1432	0/0:47,0:46:90.34:0,90,3047	0/0:33,0:33:70.12:0,70,2599	0/1:32,0:32:99:218,0,357	0/1:18,0:17:99:326,0,178	1/1:8,0:8:8.44:401,8,0
chr10	92501914	.	CTCT	C	1190.78	PASS	AB=0.881;AC=10;AF=0.179;AN=56;BaseQRankSum=7.883;DP=799;FS=2.541;HRun=0;HaplotypeScore=208.2791;InbreedingCoeff=-0.2164;MQ=58.60;MQ0=11;MQRankSum=-5.776;QD=5.00;ReadPosRankSum=1.317;VQSLOD=2.9726;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,1:37:12.51:0,13,253	0/0:15,0:15:42.14:0,42,1007	0/0:26,0:12:36.02:0,36,803	0/0:40,0:28:78.10:0,78,1662	0/1:24,0:24:80.61:81,0,211	0/1:28,1:29:75.16:75,0,1373	0/1:18,1:19:99:103,0,827	0/0:30,0:27:31.48:0,31,1010	0/1:13,10:22:99:237,0,281	0/0:20,0:20:60.16:0,60,1264	0/0:29,0:29:41.67:0,42,1493	0/0:29,0:29:75.26:0,75,1694	0/0:43,0:43:99:0,111,2445	0/0:21,0:21:51.17:0,51,1055	0/0:37,0:37:99:0,102,2410	0/0:27,0:27:72.13:0,72,1496	0/0:45,0:45:99:0,135,3141	0/0:26,0:26:66.23:0,66,1372	0/1:34,0:32:99:191,0,857	0/1:21,0:21:36.27:36,0,169	0/1:24,9:32:99:130,0,247	0/0:34,0:33:80.13:0,80,1698	0/0:27,0:27:56.78:0,57,1240	0/0:44,0:43:93.32:0,93,2004	0/0:30,0:30:75.26:0,75,1704	0/1:30,0:30:98.38:98,0,398	0/1:9,8:17:99:201,0,140	0/1:5,3:8:19.43:183,0,19
chr10	92501925	.	CCATCCATCTGTCCTCCATT	C	7740.39	PASS	AB=0.915;AC=21;AF=0.375;AN=56;BaseQRankSum=7.119;DP=774;FS=5.593;HRun=0;HaplotypeScore=402.4094;InbreedingCoeff=0.5923;MQ=60.82;MQ0=5;MQRankSum=-3.716;QD=24.26;ReadPosRankSum=-6.752;VQSLOD=0.6564;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:2,34:36:0:0,0,0	0/1:17,0:17:59.04:59,0,1039	0/0:29,0:18:18.04:0,18,1245	0/0:37,0:32:85.99:0,86,2466	1/1:7,15:22:18.02:489,18,0	0/0:25,0:25:61.45:0,61,1513	0/1:20,0:20:28.71:29,0,562	1/1:7,21:28:59.40:661,59,0	1/1:19,2:21:47.96:1218,48,0	0/0:23,0:23:63.22:0,63,2641	0/0:28,0:28:78.16:0,78,3089	0/0:23,0:23:66.21:0,66,3439	0/0:41,0:41:99:0,114,5194	0/0:19,0:19:48.16:0,48,2320	0/1:38,0:38:99:100,0,2788	0/1:29,0:29:43.04:43,0,2037	0/0:43,0:43:99:0,117,3454	0/0:24,0:24:57.20:0,57,2945	1/1:8,21:28:71.68:1325,72,0	1/1:5,16:21:12.03:214,12,0	1/1:33,0:33:20.51:468,21,0	0/0:32,0:32:78.74:0,79,3982	0/0:25,0:25:60.21:0,60,2635	0/0:41,0:41:90.31:0,90,4241	0/0:28,0:28:78.27:0,78,3745	0/1:9,25:34:77.01:1322,0,77	1/1:17,1:17:23.86:787,24,0	1/1:6,3:9:27.09:1026,27,0
chr10	92502974	.	A	AC	1429.03	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=-2.237;DP=386;FS=9.418;HRun=5;HaplotypeScore=66.3384;InbreedingCoeff=0.9686;MQ=94.92;MQ0=0;MQRankSum=-3.413;QD=29.16;ReadPosRankSum=0.489;VQSLOD=3.7620;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:61.45:0,61,673	0/0:4,0:4:12.03:0,12,129	0/0:19,0:19:45.11:0,45,481	0/0:18,0:18:42.07:0,42,439	0/0:7,0:7:21.05:0,21,225	1/1:1,13:14:39.13:513,39,0	1/1:4,18:22:51.16:663,51,0	0/0:21,0:21:48.12:0,48,515	0/0:7,0:7:21.05:0,21,226	0/0:13,0:13:36.08:0,36,379	0/0:5,0:5:15.04:0,15,161	0/0:20,0:20:54.12:0,54,572	0/0:11,0:11:33.04:0,33,342	0/0:14,0:14:36.05:0,36,369	0/0:15,0:15:27.06:0,27,290	1/1:1,12:13:30.10:395,30,0	0/0:16,0:16:48.12:0,48,516	0/0:13,0:13:33.08:0,33,355	0/0:17,0:17:36.08:0,36,381	./.	0/0:45,0:45:99:0,105,1105	0/0:8,0:8:18.04:0,18,193	0/0:8,0:8:24.05:0,24,251	0/0:17,0:17:42.10:0,42,451	0/0:7,0:7:21.05:0,21,226	0/0:10,0:10:27.05:0,27,283	0/0:11,0:11:27.03:0,27,272	0/0:5,0:5:15.04:0,15,161
chr10	92503168	.	C	CTT	133.83	PASS	AB=0.839;AC=9;AF=0.180;AN=50;BaseQRankSum=3.651;DP=147;FS=9.081;HRun=0;HaplotypeScore=63.7919;InbreedingCoeff=-0.1444;MQ=106.74;MQ0=1;MQRankSum=-0.848;QD=2.62;ReadPosRankSum=-1.161;VQSLOD=0.5619;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:14.96:0,15,187	1/1:1,1:2:0.39:53,0,0	0/0:23,0:13:8.58:0,9,91	0/1:25,0:14:4.36:4,0,95	0/0:3,0:3:5.88:0,6,53	0/0:2,0:2:0.89:0,1,2	0/1:4,1:5:19.38:49,0,19	0/0:6,0:6:7.83:0,8,86	0/1:3,1:4:24.83:25,0,75	0/0:4,0:4:3.68:0,4,50	./.	0/0:3,0:3:6.02:0,6,77	0/1:5,1:6:54.60:55,0,57	0/1:1,1:2:31.18:31,0,43	0/0:4,0:4:1.22:0,1,61	0/0:9,0:9:17.91:0,18,217	0/1:2,0:2:27.52:28,0,32	./.	0/0:4,0:3:3.01:0,3,37	0/1:3,2:5:7.99:8,0,97	0/0:8,0:8:2.11:0,2,10	0/0:6,0:6:11.95:0,12,138	0/0:3,0:3:4.26:0,4,41	0/0:6,0:6:8.97:0,9,96	0/0:4,0:4:6.64:0,7,51	0/0:2,0:2:6.02:0,6,87	0/0:1,0:1:3.01:0,3,31	./.
chr10	92503181	.	C	CCTT	228.24	PASS	AB=0.872;AC=17;AF=0.304;AN=56;BaseQRankSum=5.800;DP=168;FS=9.089;HRun=0;HaplotypeScore=73.7116;InbreedingCoeff=-0.0063;MQ=103.13;MQ0=1;MQRankSum=-4.154;QD=2.96;ReadPosRankSum=2.243;VQSLOD=0.4721;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:30.09:0,30,457	1/1:2,0:2:3.01:37,3,0	0/0:29,0:17:30.67:0,31,423	0/1:28,0:15:20.14:20,0,156	0/0:4,0:4:6.02:0,6,99	0/1:2,0:2:27.11:27,0,45	1/1:4,1:5:5.04:32,5,0	0/0:7,0:7:13.86:0,14,208	0/1:4,1:5:41.24:41,0,104	0/1:4,1:5:31.57:32,0,141	0/0:1,0:1:3.01:0,3,51	0/0:1,0:1:3.01:0,3,51	0/1:3,1:4:7.81:8,0,35	0/1:4,1:4:36.82:37,0,91	0/0:4,0:4:7.26:0,7,80	0/1:5,0:5:9.60:10,0,142	0/0:1,0:1:3.01:0,3,51	0/0:1,0:1:3.01:0,3,51	0/0:5,0:5:12.04:0,12,204	0/1:5,2:7:33.76:34,0,103	0/0:8,0:8:11.68:0,12,169	0/0:6,0:6:7.90:0,8,191	0/0:1,0:1:0:0,0,0	0/0:6,0:6:6.02:0,6,101	0/1:4,1:4:30.82:34,0,31	0/0:5,0:5:15.03:0,15,206	1/1:1,0:1:3:28,3,0	1/1:1,0:1:3.01:39,3,0
chr10	92503188	.	C	CTT	664.34	PASS	AB=0.875;AC=19;AF=0.339;AN=56;BaseQRankSum=6.827;DP=192;FS=3.206;HRun=0;HaplotypeScore=70.8186;InbreedingCoeff=-0.0118;MQ=98.82;MQ0=1;MQRankSum=-5.788;QD=9.92;ReadPosRankSum=3.462;VQSLOD=3.2844;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:6.57:0,7,511	1/1:1,0:1:3.01:38,3,0	0/0:30,0:18:37.92:0,38,415	0/0:39,0:22:15.77:0,16,409	0/0:4,0:4:7.51:0,8,143	0/1:1,1:2:42.94:50,0,43	0/1:5,0:5:53.28:53,0,66	0/0:7,0:7:15.05:0,15,233	0/1:4,1:5:99:99,0,103	0/1:6,0:5:8.14:8,0,133	0/0:2,0:2:6.02:0,6,97	0/0:1,0:1:3.01:0,3,49	1/1:3,2:5:10.28:179,10,0	0/1:6,1:6:66.40:66,0,130	0/1:2,1:3:47:51,0,47	0/1:6,0:6:0.67:1,0,169	0/0:1,0:1:3.01:0,3,49	0/0:1,0:1:3.01:0,3,49	0/0:5,0:5:12.04:0,12,196	0/1:6,1:7:76.52:77,0,99	0/0:10,0:10:17.75:0,18,258	0/1:4,2:6:99:99,0,178	0/1:2,0:2:0:0,0,0	0/0:7,1:8:15.93:0,16,245	1/1:3,1:3:3.64:50,4,0	0/1:6,1:7:37.75:38,0,267	0/0:1,0:1:0.89:0,1,2	1/1:1,0:1:0.89:2,1,0
chr10	92503200	.	C	CT	696.86	PASS	AB=0.756;AC=19;AF=0.339;AN=56;BaseQRankSum=7.461;DP=212;FS=0.000;HRun=2;HaplotypeScore=69.0441;InbreedingCoeff=-0.4019;MQ=81.56;MQ0=0;MQRankSum=-6.777;QD=6.97;ReadPosRankSum=1.378;VQSLOD=0.7873;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:19:25.47:0,25,655	0/1:3,1:4:35.20:35,0,113	0/0:29,0:20:34.88:0,35,452	0/0:28,1:16:25.76:0,26,454	0/1:6,1:7:14.19:14,0,230	0/1:1,1:2:28.11:28,0,36	0/1:4,2:6:25.23:25,0,150	0/1:8,0:8:1.90:2,0,154	0/1:4,2:6:58.35:58,0,149	0/1:3,2:4:33.68:34,0,113	0/1:3,1:4:19.03:19,0,114	0/0:3,0:3:9.03:0,9,126	0/1:1,4:5:26.92:125,0,27	0/1:4,4:7:73.15:73,0,147	0/1:2,1:3:20.61:21,0,74	0/0:5,0:5:15.02:0,15,189	0/0:3,0:3:9.03:0,9,126	0/0:2,0:2:6.02:0,6,84	0/0:7,0:7:21.07:0,21,291	0/1:4,5:9:99:136,0,136	0/0:12,0:12:21:0,21,290	0/1:5,3:8:85.46:85,0,185	0/0:3,0:3:5.64:0,6,83	0/1:6,2:8:27.09:27,0,196	0/1:2,2:3:32.93:67,0,33	0/1:7,1:8:18.20:18,0,231	0/1:3,1:4:37.83:38,0,58	1/1:0,1:1:3.01:48,3,0
chr10	92503204	.	TTTC	T	126.02	PASS	AB=0.857;AC=9;AF=0.161;AN=56;BaseQRankSum=5.371;DP=230;FS=15.839;HRun=0;HaplotypeScore=81.9446;InbreedingCoeff=-0.1989;MQ=83.40;MQ0=0;MQRankSum=-3.988;QD=2.03;ReadPosRankSum=0.696;VQSLOD=0.5144;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:19:51.17:0,51,1136	0/0:4,0:4:11.07:0,11,201	0/0:28,0:21:45.77:0,46,980	0/0:29,0:17:21.16:0,21,740	0/0:7,0:7:20.74:0,21,407	0/1:1,1:2:25.36:25,0,62	0/1:9,0:9:0.49:0,0,354	0/0:9,0:9:21.07:0,21,363	0/1:5,1:6:48.16:48,0,256	0/1:6,0:5:44.69:45,0,191	0/0:4,0:4:9.03:0,9,206	0/0:3,0:3:9.03:0,9,208	0/1:4,2:6:70.33:70,0,115	0/1:8,1:8:5.69:6,0,286	0/1:3,1:4:7.61:8,0,164	0/0:5,0:5:15.05:0,15,295	0/0:4,0:4:12.04:0,12,249	0/0:3,0:3:9.03:0,9,175	0/0:7,0:7:21.04:0,21,389	0/1:10,1:11:17.41:17,0,316	0/0:14,0:14:33.11:0,33,641	0/1:7,2:9:34.84:35,0,354	0/0:3,0:3:5.86:0,6,137	0/0:9,0:9:21.01:0,21,376	0/0:3,1:3:5.08:0,5,76	0/0:8,0:8:21.07:0,21,451	0/0:5,0:5:13.29:0,13,195	0/0:3,0:3:8.89:0,9,68
chr10	92503585	.	G	GT	5687.64	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-11.361;DP=586;FS=1.500;HRun=10;HaplotypeScore=65.4406;InbreedingCoeff=0.9582;MQ=72.88;MQ0=1;MQRankSum=-0.302;QD=21.30;ReadPosRankSum=-1.268;VQSLOD=5.3800;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:68.89:0,69,566	0/0:11,0:11:32.96:0,33,271	0/0:17,0:17:11.16:0,11,208	0/0:25,0:24:25.76:0,26,302	1/1:7,25:32:25.82:662,26,0	1/1:5,12:17:33.08:352,33,0	1/1:2,10:12:30.08:320,30,0	1/1:11,18:29:23.94:448,24,0	1/1:1,12:13:33.08:352,33,0	0/0:28,1:29:43.41:0,43,560	0/0:23,1:24:36.91:0,37,507	0/0:15,0:15:38.93:0,39,319	0/0:8,0:8:20.96:0,21,172	0/0:12,0:12:23.95:0,24,197	0/0:20,0:20:53.91:0,54,443	1/1:3,12:16:35.92:366,36,0	0/0:34,4:38:5.96:0,6,667	0/0:15,0:15:10.22:0,10,288	1/1:8,20:28:38.38:598,38,0	1/1:5,23:30:53.17:716,53,0	1/1:1,7:8:18.05:192,18,0	0/0:16,2:18:6.92:0,7,260	0/0:22,1:23:30.93:0,31,461	0/0:16,0:16:38.94:0,39,320	0/0:20,0:20:50.92:0,51,419	1/1:13,24:37:66.12:680,66,0	1/1:3,22:25:54.13:576,54,0	1/1:3,15:20:22.02:427,22,0
chr10	92504370	.	G	GA	4099.03	PASS	AB=0.583;AC=18;AF=0.321;AN=56;BaseQRankSum=-0.678;DP=551;FS=6.072;HRun=9;HaplotypeScore=81.8647;InbreedingCoeff=0.8457;MQ=68.48;MQ0=18;MQRankSum=-0.066;QD=22.65;ReadPosRankSum=1.760;VQSLOD=4.5400;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:80.95:0,81,697	0/0:7,0:7:17.99:0,18,156	0/0:35,0:15:34.85:0,35,292	0/0:30,0:16:21.31:0,21,184	0/0:13,0:13:32.97:0,33,282	0/0:22,0:23:59.07:0,59,518	0/0:23,0:23:56.93:0,57,486	0/0:21,0:21:56.99:0,57,495	0/0:13,0:13:35.99:0,36,312	1/1:3,12:15:33.09:363,33,0	1/1:4,13:17:39.02:405,39,0	1/1:7,13:20:30.08:332,30,0	1/1:2,7:9:21.06:232,21,0	1/1:5,16:21:25.08:505,25,0	0/0:23,0:23:62.99:0,63,547	0/0:10,0:10:26.99:0,27,234	0/0:22,0:22:65.97:0,66,569	1/1:3,20:23:22.07:472,22,0	0/0:16,0:15:32.96:0,33,281	0/0:21,0:21:53.96:0,54,465	0/0:30,0:30:74.93:0,75,647	0/1:8,13:20:7.03:373,0,7	0/1:3,14:16:10:356,0,10	1/1:1,15:16:42.11:465,42,0	1/1:1,21:22:54.15:597,54,0	0/0:13,1:14:8.81:0,9,305	0/0:16,0:16:47.99:0,48,416	0/0:19,0:19:46.99:0,47,390
chr10	92504847	.	GT	G	2558.23	PASS	AB=0.960;AC=21;AF=0.375;AN=56;BaseQRankSum=0.206;DP=550;FS=3.848;HRun=8;HaplotypeScore=93.4048;InbreedingCoeff=0.9021;MQ=58.38;MQ0=8;MQRankSum=0.778;QD=14.96;ReadPosRankSum=2.113;VQSLOD=3.8250;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.15:0,48,577	0/0:12,0:12:24.05:0,24,269	0/0:30,0:13:17.35:0,17,222	0/1:23,0:7:6.32:6,0,106	0/0:31,0:31:72.94:0,73,840	0/0:21,0:21:56.66:0,57,621	0/0:16,0:16:42.12:0,42,497	0/0:35,0:34:83.62:0,84,982	0/0:23,0:22:53:0,53,595	1/1:2,12:14:36.03:336,36,0	1/1:5,15:20:45.07:433,45,0	1/1:4,9:12:6.05:163,6,0	1/1:2,12:13:33.05:319,33,0	1/1:4,12:16:30.05:290,30,0	0/0:21,0:21:48.61:0,49,537	0/0:15,0:15:7.61:0,8,57	0/0:26,0:26:55.46:0,55,596	1/1:4,9:13:27.01:252,27,0	0/0:30,0:29:76.91:0,77,894	0/0:26,0:26:65.16:0,65,740	0/0:11,0:11:21.95:0,22,254	1/1:2,10:12:22.87:253,23,0	1/1:1,15:16:35.89:347,36,0	1/1:6,3:9:10.55:85,11,0	1/1:4,16:20:31.28:289,31,0	0/0:24,0:23:50.18:0,50,545	0/0:27,0:26:63.17:0,63,739	0/0:14,0:14:30.09:0,30,362
chr10	92504872	.	TTTTTTTTG	T	3536.53	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-4.288;DP=587;FS=5.284;HRun=0;HaplotypeScore=160.2470;InbreedingCoeff=0.1677;MQ=48.51;MQ0=33;MQRankSum=-1.579;QD=9.53;ReadPosRankSum=-5.852;VQSLOD=0.3473;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:53:433,53,0	1/1:9,0:9:1.31:87,1,0	0/1:37,0:11:12.98:13,0,25	0/0:41,0:7:8.41:0,8,134	0/0:35,0:34:26.81:0,27,1085	1/1:22,1:22:53.70:561,54,0	1/1:15,0:15:31.88:196,32,0	0/0:26,0:24:11.25:0,11,320	0/1:24,0:23:12.25:12,0,1183	1/1:17,0:16:24.70:226,25,0	1/1:23,0:23:10.70:263,11,0	0/1:17,0:15:14.09:154,0,14	0/1:13,0:12:53.99:54,0,110	0/1:18,0:17:99:107,0,177	0/1:21,0:21:99:203,0,145	1/1:2,11:13:9.03:203,9,0	0/1:29,0:28:43.18:330,0,43	0/1:17,0:14:74.64:155,0,75	0/0:27,0:23:31.53:0,32,528	0/0:24,0:24:18.83:0,19,1074	0/0:16,0:13:5.45:0,5,566	0/1:14,0:14:4.67:109,0,5	1/1:16,0:16:7.88:164,8,0	0/0:7,0:7:5:0,5,77	0/1:19,0:19:62.35:266,0,62	0/1:26,0:22:0.59:1,0,764	0/0:26,0:26:28.93:0,29,866	0/0:11,0:10:12.01:0,12,258
chr10	92504879	.	TG	T	5158.15	PASS	AB=0.989;AC=42;AF=0.750;AN=56;BaseQRankSum=-1.067;DP=596;FS=16.701;HRun=1;HaplotypeScore=92.2544;InbreedingCoeff=0.2075;MQ=53.33;MQ0=35;MQRankSum=-2.867;QD=9.73;ReadPosRankSum=-0.518;VQSLOD=1.1978;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:58.37:453,58,0	1/1:10,0:10:13.56:145,14,0	0/1:39,2:12:16.25:16,0,62	0/1:45,2:10:9.68:10,0,63	0/1:38,0:37:99:109,0,326	1/1:23,0:22:34.88:403,35,0	1/1:15,0:15:19.12:234,19,0	0/0:27,0:25:13.52:0,14,265	0/1:24,0:23:99:100,0,195	1/1:19,0:18:50.16:385,50,0	1/1:23,1:24:63.10:464,63,0	1/1:15,1:14:30.97:289,31,0	1/1:10,0:9:22.15:171,22,0	1/1:17,0:16:34.25:230,34,0	1/1:21,0:21:27.73:313,28,0	1/1:14,0:14:1.74:37,2,0	1/1:28,0:28:58.42:397,58,0	1/1:17,0:14:31.69:239,32,0	0/1:26,0:22:32.78:33,0,276	0/1:24,0:24:32.63:33,0,213	0/1:16,0:13:11.73:12,0,136	1/1:11,0:11:31.82:210,32,0	1/1:16,0:15:41.78:328,42,0	1/1:7,0:7:14.15:102,14,0	1/1:18,0:18:49.07:350,49,0	0/1:26,0:22:96.44:96,0,175	0/0:19,7:25:10.23:0,10,270	0/0:13,0:12:11.55:0,12,79
chr10	92505532	.	C	CG	300.31	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.720;DP=257;FS=0.000;HRun=5;HaplotypeScore=30.3510;InbreedingCoeff=0.7558;MQ=83.60;MQ0=0;MQRankSum=-2.035;QD=25.03;ReadPosRankSum=1.787;VQSLOD=1.9220;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:12:30.10:395,30,0	0/0:8,0:8:21.04:0,21,218	0/0:10,0:10:20.60:0,21,219	0/0:8,0:8:14.22:0,14,134	0/0:7,0:7:21.05:0,21,225	0/0:7,0:7:21.05:0,21,226	0/0:17,0:17:48.12:0,48,516	0/0:6,0:6:18.05:0,18,193	0/0:9,0:9:27.07:0,27,290	0/0:5,0:5:12.03:0,12,129	0/0:7,0:7:21.04:0,21,218	0/0:7,0:7:17.96:0,18,178	0/0:8,0:8:21.05:0,21,224	0/0:9,0:9:24.05:0,24,250	0/0:6,0:6:18.03:0,18,185	0/0:7,0:7:18.04:0,18,193	0/0:10,0:10:30.08:0,30,322	0/0:10,0:10:30.08:0,30,322	0/0:14,0:14:30.07:0,30,322	0/0:7,0:7:18.05:0,18,193	0/0:30,0:30:66.16:0,66,709	0/0:9,0:9:21.05:0,21,225	0/0:7,0:7:21.05:0,21,226	0/0:8,0:8:24.06:0,24,258	0/0:7,0:7:21.05:0,21,224	0/0:14,0:14:39.09:0,39,413	0/0:7,0:7:18.05:0,18,193	0/0:1,0:1:3.01:0,3,32
chr10	92507102	.	T	TCTTTCCCC	38104.38	PASS	AB=0.557;AC=29;AF=0.518;AN=56;BaseQRankSum=-12.590;DP=781;FS=6.848;HRun=0;HaplotypeScore=180.9733;InbreedingCoeff=0.9205;MQ=58.07;MQ0=0;MQRankSum=-21.017;QD=93.16;ReadPosRankSum=0.119;VQSLOD=5.1532;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,29:44:93.78:3426,94,0	1/1:6,7:13:36.12:1190,36,0	0/0:26,0:22:62.70:0,63,1598	0/0:29,0:25:69.22:0,69,1736	1/1:2,20:26:66.10:2395,66,0	1/1:9,14:25:54.18:2074,54,0	1/1:10,23:33:90.31:3592,90,0	0/0:35,0:35:87.29:0,87,2312	1/1:5,27:32:90.31:3689,90,0	0/0:32,0:32:84.28:0,84,2204	0/0:21,0:21:57.20:0,57,1533	0/0:37,0:37:99:0,108,3013	0/0:36,0:36:99:0,102,2806	0/0:27,0:27:69.21:0,69,1806	1/1:6,28:36:99:4163,99,0	1/1:9,18:32:69.24:2853,69,0	1/1:6,18:28:63.22:2677,63,0	0/0:31,0:31:89.93:0,90,2363	1/1:11,7:19:39.13:1540,39,0	1/1:3,15:19:48.16:1908,48,0	1/1:15,7:26:33.11:1447,33,0	0/0:28,0:28:69.24:0,69,1866	0/0:25,0:25:69.22:0,69,1787	0/0:31,0:31:84.08:0,84,2131	0/0:14,0:14:42.12:0,42,1096	0/1:7,25:34:74.14:3473,0,74	1/1:5,24:31:78.27:3309,78,0	1/1:6,3:9:9.03:367,9,0
chr10	92507726	.	GGACTCCCT	G	7990.90	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.821;DP=529;FS=0.000;HRun=0;HaplotypeScore=147.5332;InbreedingCoeff=0.9937;MQ=84.39;MQ0=0;MQRankSum=-14.480;QD=61.47;ReadPosRankSum=0.461;VQSLOD=4.7424;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,4563	0/0:6,0:6:18.06:0,18,654	0/0:22,0:21:60.20:0,60,2207	0/0:22,0:21:46.29:0,46,1806	1/1:3,18:21:48.06:1327,48,0	0/0:22,0:22:63.22:0,63,2758	0/0:24,0:24:66.23:0,66,2805	0/0:24,0:24:60.21:0,60,2581	1/1:0,17:17:45.15:1259,45,0	0/0:25,0:25:72.24:0,72,2994	0/0:13,0:13:39.12:0,39,1307	0/0:15,0:15:42.14:0,42,1786	0/0:16,0:16:48.16:0,48,2071	0/0:19,0:19:57.20:0,57,2356	0/0:15,0:15:45.15:0,45,1976	0/0:8,0:8:24.08:0,24,1056	0/0:29,0:29:78.27:0,78,3381	0/0:36,0:36:99:0,105,4398	1/1:6,9:16:27.09:755,27,0	1/1:4,10:14:27.09:710,27,0	1/1:2,10:12:15.05:420,15,0	0/0:13,0:13:39.13:0,39,1716	0/0:10,0:10:27.09:0,27,1188	0/0:26,0:26:75.21:0,75,3063	0/0:16,0:16:45.15:0,45,1892	1/1:1,13:14:39.13:1091,39,0	1/1:1,24:25:69.24:1927,69,0	1/1:2,9:11:18.06:503,18,0
chr10	92510302	.	C	CCT	5790.16	PASS	AB=0.797;AC=43;AF=0.796;AN=54;BaseQRankSum=-0.847;DP=544;FS=25.133;HRun=0;HaplotypeScore=155.6835;InbreedingCoeff=0.0550;MQ=51.79;MQ0=7;MQRankSum=0.788;QD=11.96;ReadPosRankSum=2.322;VQSLOD=2.5289;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:1.61:0,2,35	0/1:6,5:11:7.82:237,0,8	0/0:31,0:15:26.52:0,27,230	0/1:42,0:16:8.91:9,0,146	1/1:6,7:15:3.01:47,3,0	1/1:8,8:15:20.99:244,21,0	1/1:15,7:22:23.91:361,24,0	0/1:27,5:32:19.72:484,0,20	1/1:17,11:29:24.96:381,25,0	1/1:16,3:19:26.82:332,27,0	./.	0/1:17,6:23:9.39:276,0,9	0/1:14,2:16:15.97:169,0,16	1/1:11,13:24:27.07:386,27,0	0/1:9,14:23:15.35:228,0,15	1/1:10,14:24:5.67:483,6,0	1/1:6,0:6:3.01:31,3,0	1/1:5,1:6:12:142,12,0	1/1:17,11:27:44.10:571,44,0	1/1:9,6:15:5.61:44,6,0	1/1:9,11:19:9.03:128,9,0	1/1:8,5:13:6.01:71,6,0	1/1:7,3:10:3.01:37,3,0	1/1:10,10:20:5.97:73,6,0	1/1:8,5:13:12.02:147,12,0	1/1:5,10:16:30.81:398,31,0	0/1:11,6:17:18.39:183,0,18	1/1:9,14:21:21.07:328,21,0
chr10	92510317	.	CTG	C	893.48	PASS	AB=0.986;AC=29;AF=0.537;AN=54;BaseQRankSum=-5.846;DP=532;FS=0.000;HRun=0;HaplotypeScore=169.0205;InbreedingCoeff=-0.4794;MQ=41.67;MQ0=15;MQRankSum=0.991;QD=1.88;ReadPosRankSum=-7.251;VQSLOD=-0.1489;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:27:69.01:69,0,170	0/1:7,3:10:10.43:10,0,57	0/1:29,1:11:12.79:13,0,179	0/1:41,0:13:51.22:51,0,69	0/0:13,0:13:3.01:0,3,33	0/1:15,0:13:24.88:25,0,65	0/1:16,0:15:42.59:43,0,75	0/1:35,0:28:99:120,0,185	0/1:30,0:29:10.84:11,0,98	0/1:20,0:20:57.02:57,0,78	./.	0/1:20,0:19:42.11:42,0,102	0/1:16,0:16:3.84:63,0,4	0/1:25,0:25:53.46:53,0,81	0/1:21,0:21:41.56:42,0,76	0/1:22,0:22:30.90:31,0,100	1/1:5,0:5:5.88:36,6,0	1/1:4,0:4:2.73:53,3,0	0/1:33,0:29:73.82:74,0,215	1/1:10,0:10:5.54:27,6,0	0/0:20,0:20:8.84:0,9,96	1/1:12,0:12:5.98:47,6,0	1/1:12,0:11:3:25,3,0	0/1:19,0:19:17.32:18,0,17	0/1:15,0:15:19.07:50,0,19	0/1:16,0:16:81.42:81,0,186	0/1:20,0:18:4.51:5,0,189	0/0:19,0:17:23.70:0,24,169
chr10	92510324	.	T	TCG	928.01	PASS	AB=0.978;AC=21;AF=0.389;AN=54;BaseQRankSum=-0.338;DP=505;FS=0.572;HRun=0;HaplotypeScore=169.4617;InbreedingCoeff=0.2325;MQ=37.21;MQ0=18;MQRankSum=-0.204;QD=3.70;ReadPosRankSum=1.902;VQSLOD=2.7290;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:44.93:0,45,408	0/1:9,1:10:3.23:84,0,3	0/0:25,0:7:21.07:0,21,281	0/0:36,0:11:17.63:0,18,204	1/1:13,0:13:1.03:3,1,0	0/1:17,0:15:7.28:7,0,21	1/1:16,0:14:13.02:96,13,0	0/1:39,0:28:66.74:217,0,67	0/0:32,0:31:11.89:0,12,77	0/1:15,0:15:37.43:115,0,37	./.	1/1:20,0:19:5.60:126,6,0	0/1:15,1:16:18.80:19,0,34	1/1:19,2:21:6.01:91,6,0	1/1:20,0:20:9.40:109,9,0	0/1:20,1:21:15.29:178,0,15	0/0:5,1:6:3.83:0,4,20	0/1:2,0:2:4.02:5,0,4	0/0:32,0:27:57.40:0,57,425	0/0:9,0:9:0:0,0,0	0/0:18,0:17:11.71:0,12,81	0/0:10,0:10:1.25:0,1,3	0/0:10,0:9:2.68:0,3,11	1/1:17,0:17:2.49:25,2,0	0/1:13,0:13:1.46:2,0,1	0/1:11,0:11:4.41:4,0,138	0/0:22,0:20:21.69:0,22,181	0/0:18,0:16:11.09:0,11,107
chr10	92510333	.	GTC	G	1046.52	PASS	AB=0.797;AC=27;AF=0.587;AN=46;BaseQRankSum=2.388;DP=450;FS=5.799;HRun=0;HaplotypeScore=160.5362;InbreedingCoeff=0.1682;MQ=33.09;MQ0=19;MQRankSum=-2.975;QD=3.50;ReadPosRankSum=4.154;VQSLOD=2.2721;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:27:32.97:0,33,298	1/1:8,4:12:26.76:219,27,0	0/0:13,0:5:5.60:0,6,35	0/0:22,2:6:2.99:0,3,23	./.	1/1:8,8:14:0.19:62,0,0	1/1:9,3:10:2.97:21,3,0	0/1:38,1:28:86.31:97,0,86	0/1:28,0:27:2.53:3,0,10	0/1:8,9:17:8.51:250,0,9	0/0:2,4:5:0:0,0,0	1/1:9,10:18:11.96:107,12,0	0/1:8,9:17:44.25:69,0,44	1/1:13,8:21:2.97:21,3,0	0/1:12,8:20:0:0,0,0	0/1:7,10:17:0.01:120,0,0	1/1:6,1:7:1.49:24,1,0	1/1:0,1:1:3:28,3,0	1/1:26,0:20:10.70:58,11,0	./.	./.	./.	./.	0/0:8,6:14:0.47:0,0,2	1/1:5,9:14:2.85:22,3,0	1/1:11,0:11:7.22:57,7,0	0/1:20,1:19:7.06:17,0,7	0/0:12,0:10:4.34:0,4,19
chr10	92510339	.	CTCTG	C	1048.30	PASS	AB=0.974;AC=29;AF=0.518;AN=56;BaseQRankSum=1.772;DP=424;FS=0.754;HRun=0;HaplotypeScore=167.4613;InbreedingCoeff=0.0987;MQ=31.87;MQ0=18;MQRankSum=-1.932;QD=3.37;ReadPosRankSum=1.131;VQSLOD=2.7156;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:33.10:0,33,477	1/1:11,1:12:17.75:154,18,0	0/0:8,0:3:6:0,6,53	0/0:16,0:2:3.01:0,3,43	0/0:10,0:11:0:0,0,0	0/1:16,0:14:6.83:7,0,12	1/1:12,0:10:1.65:5,2,0	0/1:36,2:27:42.76:209,0,43	1/1:24,1:25:6.24:56,6,0	0/1:18,0:17:67.44:163,0,67	0/0:7,0:6:2.04:0,2,6	1/1:17,0:16:9.02:72,9,0	0/1:17,1:18:33.27:61,0,33	1/1:18,0:18:1.66:4,2,0	0/0:17,2:19:1.90:0,2,6	0/1:15,0:15:19.73:72,0,20	0/1:6,0:6:9.58:15,0,10	1/1:1,0:1:2.90:16,3,0	1/1:16,2:13:17.36:149,17,0	0/0:10,1:11:0:0,0,0	0/1:11,1:10:0:0,0,0	0/1:11,0:11:0:0,0,1	0/1:11,0:10:0:0,0,0	0/0:12,0:12:0.61:0,1,2	1/1:16,0:16:1.56:4,2,0	0/1:10,1:13:2.50:120,0,2	0/1:21,1:19:16.94:49,0,17	1/1:9,0:7:3.80:27,4,0
chr10	92510343	.	GTGTCTC	G	1664.62	PASS	AB=0.949;AC=34;AF=0.630;AN=54;BaseQRankSum=-0.678;DP=381;FS=2.842;HRun=0;HaplotypeScore=155.9069;InbreedingCoeff=0.1250;MQ=31.12;MQ0=18;MQRankSum=-2.238;QD=5.55;ReadPosRankSum=-0.987;VQSLOD=2.2147;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:33.10:0,33,468	1/1:7,2:12:27.08:341,27,0	1/1:6,0:1:2.37:8,2,0	./.	0/0:9,0:10:0:0,0,0	1/1:15,0:13:2.14:135,2,0	1/1:9,0:7:2.84:35,3,0	1/1:28,0:17:12.64:136,13,0	0/1:23,0:22:4.67:58,0,5	1/1:14,3:17:0.51:353,1,0	0/0:7,0:6:2.04:0,2,6	1/1:15,1:15:4.37:133,4,0	0/1:16,2:17:2.69:74,0,3	1/1:15,1:17:2.68:36,3,0	0/0:13,2:15:1.82:0,2,6	1/1:13,0:13:16.51:192,17,0	1/1:7,0:7:8.80:79,9,0	1/1:2,0:2:0.29:37,0,0	0/1:16,0:10:12.70:38,0,13	0/1:10,0:11:0:0,0,0	0/1:12,0:9:0:1,0,0	0/1:9,2:11:0:0,0,0	0/1:9,1:9:0:0,0,0	0/0:10,1:11:0.16:0,0,1	1/1:13,3:16:2.88:32,3,0	0/1:11,0:12:68.56:69,0,108	0/1:21,0:18:26.62:27,0,74	0/1:7,0:5:4.90:5,0,15
chr10	92510345	.	GTC	G	650.07	PASS	AB=0.916;AC=15;AF=0.300;AN=50;BaseQRankSum=-2.892;DP=392;FS=2.948;HRun=0;HaplotypeScore=155.7598;InbreedingCoeff=0.0209;MQ=31.19;MQ0=18;MQRankSum=-1.858;QD=3.05;ReadPosRankSum=1.402;VQSLOD=2.8508;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:30:0.32:0,0,178	0/1:11,1:12:10.80:11,0,25	./.	./.	./.	0/1:12,3:13:5.49:5,0,45	0/0:5,4:7:2.76:0,3,13	1/1:16,11:16:31.87:291,32,0	0/1:23,0:22:7.20:22,0,7	0/1:16,2:17:94.82:158,0,95	0/0:7,0:6:2.04:0,2,6	0/0:15,1:15:0.01:0,0,18	0/0:19,0:18:4.94:0,5,101	0/0:16,2:18:1.89:0,2,6	0/0:16,1:17:2.04:0,2,6	0/0:15,1:16:5.48:0,5,51	0/1:4,3:7:19.62:60,0,20	0/0:2,0:2:5.75:0,6,44	1/1:15,1:10:5.55:66,6,0	0/0:12,0:12:0:0,0,0	0/1:12,0:9:0:0,0,0	0/0:11,1:12:2.06:0,2,11	0/0:10,0:9:0:0,0,0	0/0:11,0:11:0.21:0,0,2	1/1:17,1:17:2.87:32,3,0	0/1:12,1:13:6.69:112,0,7	0/1:20,1:18:13.01:13,0,40	0/0:7,0:5:1.07:0,1,3
chr10	92510347	.	C	CTG	1226.61	PASS	AB=0.980;AC=27;AF=0.519;AN=52;BaseQRankSum=-3.857;DP=417;FS=12.528;HRun=0;HaplotypeScore=170.5048;InbreedingCoeff=0.1869;MQ=30.99;MQ0=19;MQRankSum=-1.377;QD=3.61;ReadPosRankSum=-2.991;VQSLOD=1.2926;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,14:31:71.39:299,0,71	0/1:12,0:12:12.14:12,0,103	./.	./.	0/1:12,0:12:0:0,0,0	0/1:15,0:13:5.18:5,0,65	0/0:9,0:7:1.04:0,1,3	1/1:32,0:21:13.86:105,14,0	1/1:25,0:24:15.94:101,16,0	0/0:19,0:18:4.98:0,5,149	0/1:10,0:9:0:0,0,0	0/1:16,0:15:4.16:4,0,60	0/0:19,0:18:10.71:0,11,89	0/0:18,0:18:3.41:0,3,23	0/1:17,0:17:0.06:0,0,0	0/1:17,0:16:11.34:11,0,80	0/1:7,0:7:4.57:5,0,20	0/0:2,0:2:2.44:0,2,20	1/1:21,0:16:26.01:253,26,0	0/1:14,0:14:0:0,0,0	0/1:11,0:8:0.17:0,0,0	1/1:14,0:14:2.98:7,3,0	0/1:12,0:11:0:0,0,0	0/1:11,0:11:0.46:0,0,1	0/1:19,0:18:2.13:2,0,3	1/1:15,1:16:35.78:329,36,0	0/1:19,0:16:7.11:90,0,7	1/1:7,0:5:14.85:131,15,0
chr10	92510397	.	C	CTGTG	635.09	PASS	AB=0.984;AC=14;AF=0.250;AN=56;BaseQRankSum=3.757;DP=537;FS=2.280;HRun=0;HaplotypeScore=180.4598;InbreedingCoeff=0.2236;MQ=49.62;MQ0=7;MQRankSum=-3.290;QD=2.91;ReadPosRankSum=2.112;VQSLOD=2.7945;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:39:60.74:0,61,1090	0/0:11,0:10:8.95:0,9,88	0/0:27,0:15:29.03:0,29,580	0/0:24,0:12:2.24:0,2,378	0/0:18,0:18:33.08:0,33,488	0/0:12,0:12:21.02:0,21,218	0/0:16,0:15:26.51:0,27,211	0/1:34,0:33:96.10:96,0,128	0/0:20,0:19:16.13:0,16,181	0/1:28,0:27:10.18:405,0,10	0/1:17,1:17:0:0,0,0	1/1:13,1:14:6.81:82,7,0	0/1:16,0:15:10.07:38,0,10	0/1:20,1:21:13.92:70,0,14	0/0:25,0:25:21.06:0,21,230	0/0:20,0:20:38.88:0,39,353	0/1:11,0:11:10.78:11,0,123	0/1:4,0:4:21.77:22,0,29	0/0:20,0:19:42.45:0,42,535	0/0:17,0:17:33.72:0,34,472	0/0:8,0:8:12:0,12,123	0/1:19,0:18:0:0,0,0	1/1:13,0:13:3.01:47,3,0	0/1:15,1:16:0.17:0,0,0	0/1:24,0:22:0:0,0,0	0/0:27,0:26:17.27:0,17,725	0/0:23,0:19:12.55:0,13,282	0/0:8,0:6:14.68:0,15,174
chr10	92510399	.	C	CTGTGTG	2140.90	PASS	AB=0.777;AC=22;AF=0.393;AN=56;BaseQRankSum=1.638;DP=531;FS=5.155;HRun=0;HaplotypeScore=172.1975;InbreedingCoeff=0.4897;MQ=51.37;MQ0=7;MQRankSum=-3.802;QD=8.08;ReadPosRankSum=0.748;VQSLOD=2.5880;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:38:66.15:0,66,1157	0/1:10,0:9:14.33:33,0,14	0/0:27,0:15:35.18:0,35,697	0/0:24,0:13:21.46:0,21,508	0/0:19,0:19:35.83:0,36,661	0/0:13,0:13:12.87:0,13,91	0/1:16,0:15:2.76:3,0,21	1/1:32,0:31:45.43:516,45,0	0/0:17,0:16:1.23:0,1,238	1/1:8,17:25:41.62:995,42,0	0/1:6,10:16:0:0,0,0	1/1:11,1:12:5.91:164,6,0	1/1:3,9:14:6.02:177,6,0	1/1:4,16:21:3.01:72,3,0	0/0:21,0:22:13.33:0,13,93	0/1:22,0:22:12.74:13,0,56	0/1:9,0:10:13.71:14,0,49	1/1:4,0:4:9.03:227,9,0	0/0:19,0:18:40.03:0,40,715	0/0:17,0:17:33.67:0,34,622	0/0:8,0:8:12.04:0,12,216	0/1:4,15:23:0:0,0,0	1/1:16,0:16:3.01:94,3,0	0/1:3,12:15:0.02:0,0,0	0/1:8,15:23:0:0,0,0	0/0:26,0:25:40.32:0,40,968	0/0:23,0:19:20.44:0,20,469	0/0:8,0:6:14.78:0,15,248
chr10	92510564	.	GTCATTCAT	G	5633	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=4.199;DP=654;FS=9.487;HRun=0;HaplotypeScore=192.7090;InbreedingCoeff=0.9323;MQ=60.94;MQ0=3;MQRankSum=-7.999;QD=27.89;ReadPosRankSum=1.485;VQSLOD=3.5282;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,114,4672	0/0:10,0:11:18.06:0,18,564	0/0:17,0:14:6.02:0,6,172	0/0:16,0:13:15.01:0,15,454	0/0:14,0:25:51.17:0,51,1572	0/0:11,0:21:33.11:0,33,1129	0/0:11,0:15:15.03:0,15,395	0/0:38,0:38:51.18:0,51,1923	0/0:15,0:33:66.23:0,66,2285	1/1:10,13:23:33.11:806,33,0	1/1:7,11:18:21.07:532,21,0	1/1:11,12:24:24.08:573,24,0	1/1:11,18:29:30.57:760,31,0	1/1:14,10:24:24.08:608,24,0	0/0:32,0:32:66.23:0,66,2601	0/0:4,0:22:45.15:0,45,1514	0/0:26,0:26:48.16:0,48,1889	1/1:6,2:8:3.01:76,3,0	0/0:13,0:18:24.08:0,24,809	0/0:11,0:26:63.22:0,63,2000	0/0:28,0:33:40.95:0,41,1007	1/1:2,12:14:24.08:608,24,0	1/1:9,13:23:30.10:760,30,0	1/1:10,7:17:5.42:151,5,0	1/1:8,14:22:30:760,30,0	0/0:15,0:28:57.19:0,57,1894	0/0:8,0:19:24.08:0,24,852	0/0:25,0:25:36.12:0,36,1120
chr10	92511259	.	GA	G	1226.61	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.473;DP=714;FS=4.149;HRun=2;HaplotypeScore=71.9798;InbreedingCoeff=0.9992;MQ=91.85;MQ0=0;MQRankSum=-2.212;QD=27.26;ReadPosRankSum=1.625;VQSLOD=3.2700;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,44:45:99:1321,102,0	0/0:10,0:10:30.10:0,30,449	0/0:28,0:28:78.04:0,78,1046	0/0:33,0:33:86.19:0,86,1158	0/0:17,0:17:51.17:0,51,762	0/0:18,0:18:54.17:0,54,780	0/0:29,0:29:84.23:0,84,1194	0/0:32,0:32:96.30:0,96,1383	0/0:32,0:32:93.26:0,93,1306	0/0:20,0:20:60.20:0,60,898	0/0:21,0:21:57.19:0,57,852	0/0:18,0:18:54.17:0,54,789	0/0:28,0:28:84.28:0,84,1252	0/0:24,0:24:72.23:0,72,1041	0/0:33,0:32:93.30:0,93,1358	0/0:26,0:26:78.26:0,78,1168	0/0:39,0:39:99:0,114,1626	0/0:26,0:26:75.25:0,75,1123	0/0:20,0:20:60.18:0,60,860	0/0:22,0:22:63.18:0,63,900	0/0:35,0:35:99:0,102,1507	0/0:24,0:24:63.21:0,63,937	0/0:17,0:17:51.16:0,51,743	0/0:24,0:24:69.14:0,69,944	0/0:28,0:28:81.27:0,81,1209	0/0:23,0:23:69.23:0,69,1016	0/0:31,0:31:93.30:0,93,1372	0/0:11,0:11:33.11:0,33,494
chr10	92511555	.	T	TAAAA	4854.91	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-3.290;DP=544;FS=10.106;HRun=8;HaplotypeScore=119.2217;InbreedingCoeff=0.9963;MQ=76.76;MQ0=1;MQRankSum=-1.872;QD=44.54;ReadPosRankSum=-0.656;VQSLOD=2.6542;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:22:58.59:364,59,0	1/1:5,11:17:39.13:903,39,0	0/0:18,0:19:29.44:0,29,408	0/0:14,0:12:17.07:0,17,319	0/0:26,0:26:60.12:0,60,881	1/1:4,9:14:33.03:733,33,0	1/1:6,6:13:30.10:647,30,0	0/0:27,0:27:63.15:0,63,936	0/0:17,0:17:36.06:0,36,544	0/0:22,0:22:63.21:0,63,947	0/0:21,0:21:57.15:0,57,842	0/0:17,0:17:42.11:0,42,615	0/0:16,0:16:39.11:0,39,585	0/0:18,0:18:54.18:0,54,811	1/1:5,7:14:24.07:568,24,0	1/1:3,7:10:30.08:608,30,0	1/1:2,14:18:45.15:1031,45,0	0/0:27,0:26:72.22:0,72,1089	0/0:23,0:23:48.10:0,48,726	0/0:33,0:33:93.31:0,93,1400	0/0:11,0:11:30.09:0,30,453	0/0:21,0:21:54.13:0,54,798	0/0:23,0:24:52.36:0,52,762	0/0:12,0:12:25.05:0,25,402	0/0:36,0:35:81.23:0,81,1225	0/0:19,0:19:52.73:0,53,776	0/0:25,0:25:72.22:0,72,1083	0/0:7,0:7:21.07:0,21,318
chr10	92511603	.	A	AGTGTGTGTGT	8139.51	PASS	AB=0.670;AC=40;AF=0.741;AN=54;BaseQRankSum=-3.435;DP=624;FS=2.545;HRun=0;HaplotypeScore=221.9733;InbreedingCoeff=0.6107;MQ=51.11;MQ0=10;MQRankSum=-5.800;QD=16.38;ReadPosRankSum=-0.710;VQSLOD=4.0377;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:14.24:469,14,0	0/0:13,0:13:15.05:0,15,389	0/0:30,0:14:2.44:0,2,109	0/0:18,0:8:8.77:0,9,164	1/1:17,0:37:14.33:220,14,0	0/1:11,0:18:55.19:55,0,306	0/1:9,0:21:23.57:24,0,244	1/1:28,0:34:30.60:487,31,0	1/1:7,0:17:21.07:366,21,0	1/1:22,6:30:27.07:888,27,0	1/1:16,7:26:8.97:383,9,0	1/1:12,2:14:2.95:150,3,0	1/1:11,2:16:9.03:381,9,0	1/1:10,4:16:3.01:150,3,0	0/0:22,0:22:54.18:0,54,1328	0/0:5,0:18:40.63:0,41,274	0/0:21,0:21:48.12:0,48,1156	1/1:17,3:19:18.06:755,18,0	1/1:21,0:28:35.42:494,35,0	1/1:14,0:23:11.98:202,12,0	1/1:19,0:30:6.60:221,7,0	1/1:13,4:17:13.52:494,14,0	1/1:8,7:21:8.92:450,9,0	1/1:13,6:19:2.99:121,3,0	1/1:15,12:28:18.06:802,18,0	1/1:10,0:21:41.07:725,41,0	1/1:11,0:23:17.72:304,18,0	./.
chr10	92511618	.	G	GTGTGTA	5093.87	PASS	AB=1.000;AC=21;AF=0.389;AN=54;BaseQRankSum=6.178;DP=664;FS=8.346;HRun=0;HaplotypeScore=201.0729;InbreedingCoeff=-0.3298;MQ=48.34;MQ0=12;MQRankSum=-6.070;QD=11.12;ReadPosRankSum=5.713;VQSLOD=2.8075;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,11:36:42.45:926,42,0	0/0:12,0:12:30:0,30,454	0/0:43,0:21:42.86:0,43,485	0/0:22,0:9:11.02:0,11,162	0/1:37,0:37:86.77:287,0,87	0/0:19,0:18:15.20:0,15,273	0/0:29,0:29:18.67:0,19,370	0/1:30,0:30:99:171,0,403	0/1:17,0:17:2.90:410,0,3	0/1:27,0:26:99:275,0,210	0/1:25,0:25:34:112,0,34	0/1:13,0:12:17.95:56,0,18	0/1:14,0:14:34.91:147,0,35	0/1:16,0:16:46.29:46,0,77	0/0:22,0:22:60.17:0,60,1238	0/0:23,0:23:48.87:0,49,245	0/0:31,0:31:53.96:0,54,1048	0/1:20,0:19:71.81:294,0,72	0/1:24,0:24:99:298,0,327	0/1:23,0:23:51.83:302,0,52	0/1:41,0:41:99:194,0,124	0/1:17,0:17:54.15:118,0,54	0/1:23,0:23:65.29:165,0,65	1/1:24,0:24:2.85:20,3,0	0/1:28,0:28:99:351,0,105	0/1:22,0:22:99:554,0,176	0/1:21,0:21:96.74:369,0,97	./.
chr10	92511775	.	T	TTGTGTGTGTGTGTG	14746.31	PASS	AB=0.814;AC=52;AF=0.929;AN=56;BaseQRankSum=-1.949;DP=906;FS=9.950;HRun=0;HaplotypeScore=302.8669;InbreedingCoeff=0.3106;MQ=51.24;MQ0=19;MQRankSum=-2.369;QD=17.17;ReadPosRankSum=0.909;VQSLOD=2.1167;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:47:53.93:1245,54,0	1/1:1,0:16:5.70:205,6,0	0/1:45,0:19:5.77:6,0,417	0/0:47,0:23:9.09:0,9,469	1/1:6,8:22:6.02:117,6,0	1/1:13,0:23:27.03:375,27,0	0/1:11,0:27:18.95:228,0,19	1/1:31,0:40:44.87:599,45,0	1/1:6,15:29:12.04:600,12,0	1/1:16,0:37:54.16:1147,54,0	1/1:11,0:20:6.02:113,6,0	1/1:6,0:30:21.52:614,22,0	1/1:15,0:27:9.03:220,9,0	1/1:7,0:27:6.02:156,6,0	1/1:10,0:37:33.11:917,33,0	1/1:9,0:30:22.99:481,23,0	1/1:25,0:28:42.11:868,42,0	1/1:31,0:32:48.53:1030,49,0	1/1:18,0:24:25.79:656,26,0	1/1:6,12:25:15.05:574,15,0	1/1:82,0:80:44.30:855,44,0	1/1:11,0:29:27.09:524,27,0	1/1:6,0:25:9.03:154,9,0	1/1:56,0:58:32.76:759,33,0	1/1:4,0:20:6.02:107,6,0	1/1:30,0:29:51.15:1095,51,0	1/1:22,0:22:36.05:898,36,0	1/1:4,12:15:3.01:202,3,0
chr10	92512349	.	G	GAC	6533.89	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=16.737;DP=1001;FS=5.476;HRun=0;HaplotypeScore=212.7397;InbreedingCoeff=0.8577;MQ=62.00;MQ0=26;MQRankSum=2.198;QD=16.80;ReadPosRankSum=1.236;VQSLOD=4.5244;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:49,0:48:98.35:1042,98,0	1/1:5,10:15:30.10:435,30,0	0/1:68,0:32:9.67:10,0,584	0/1:87,0:37:2.47:2,0,536	0/0:28,0:28:75.22:0,75,942	1/1:6,30:34:84.27:1251,84,0	1/1:11,17:28:42.14:616,42,0	0/0:41,0:39:99:0,102,1266	0/0:34,0:34:93.27:0,93,1166	0/0:32,0:32:93.30:0,93,1182	0/0:24,0:24:39.13:0,39,500	0/0:24,0:24:60.19:0,60,766	0/0:27,0:27:78.25:0,78,1001	0/0:39,0:39:99:0,114,1437	1/1:12,27:37:69.20:1031,69,0	1/1:9,21:30:63.18:920,63,0	1/1:7,28:33:81.27:1227,81,0	0/0:34,0:34:93.73:0,94,1175	0/0:25,0:23:60.19:0,60,765	0/0:31,0:31:72.23:0,72,925	0/0:36,0:36:90.28:0,90,1143	0/0:35,0:35:89.91:0,90,1134	0/0:31,0:31:78.08:0,78,980	0/0:72,0:71:99:0,169,2175	0/0:25,0:25:69.19:0,69,858	0/0:33,0:33:87.26:0,87,1082	0/0:35,0:35:96.29:0,96,1214	0/0:6,0:6:12.01:0,12,126
chr10	92512351	.	C	CAG	4209.27	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=17.236;DP=999;FS=4.267;HRun=0;HaplotypeScore=222.1475;InbreedingCoeff=0.5646;MQ=61.65;MQ0=27;MQRankSum=0.950;QD=13.32;ReadPosRankSum=3.497;VQSLOD=3.4954;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,38:49:92.87:1845,93,0	0/1:15,0:15:29.13:178,0,29	0/0:71,0:33:27.54:0,28,965	0/1:85,0:35:21.21:21,0,690	0/0:28,0:28:78.24:0,78,1163	0/1:36,0:34:3.28:511,0,3	0/1:28,0:28:1.44:249,0,1	0/0:40,0:38:99:0,108,1584	0/0:34,0:34:99:0,99,1464	0/0:31,0:31:93.32:0,93,1408	0/0:23,0:23:51.02:0,51,682	0/0:24,0:24:66.19:0,66,962	0/0:27,0:27:81.26:0,81,1213	0/0:39,0:39:99:0,117,1760	1/1:38,0:36:40.40:447,40,0	0/1:29,0:29:6.24:357,0,6	1/1:33,0:32:80.48:602,80,0	0/0:35,0:35:99:0,100,1454	0/0:26,0:23:66.18:0,66,951	0/0:31,0:31:81.23:0,81,1161	0/0:35,0:35:96.30:0,96,1420	0/0:36,0:36:99:0,105,1481	0/0:31,0:31:78.15:0,78,1182	0/0:73,0:72:99:0,190,2781	0/0:24,0:24:72.23:0,72,1074	0/0:34,0:34:99:0,99,1417	0/0:36,0:36:99:0,105,1522	0/0:5,0:5:15.01:0,15,199
chr10	92512361	.	CA	C	5878.59	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=16.923;DP=997;FS=1.014;HRun=1;HaplotypeScore=202.8647;InbreedingCoeff=0.9668;MQ=61.50;MQ0=29;MQRankSum=3.167;QD=26.36;ReadPosRankSum=3.653;VQSLOD=4.6874;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,44:49:81.85:1218,82,0	1/1:0,11:11:7.29:307,7,0	0/0:70,0:31:60.89:0,61,1040	0/0:84,0:37:10.57:0,11,812	0/0:30,0:30:78.26:0,78,1217	1/1:0,34:32:39.56:1003,40,0	1/1:2,25:27:38.26:592,38,0	0/0:46,0:44:99:0,132,2011	0/0:34,0:34:99:0,102,1570	0/0:34,0:34:99:0,99,1543	0/0:18,0:18:39.13:0,39,614	0/0:25,0:25:75.24:0,75,1145	0/0:27,0:27:81.26:0,81,1232	0/0:43,0:43:99:0,129,2025	1/1:1,36:35:72.20:921,72,0	1/1:3,25:28:39.60:755,40,0	1/1:1,33:33:86.94:1082,87,0	0/0:38,0:38:99:0,101,1686	0/0:27,0:24:69.21:0,69,1058	0/0:27,0:27:75.26:0,75,1189	0/0:37,0:37:99:0,107,1643	0/0:35,0:35:99:0,102,1599	0/0:33,0:33:80.89:0,81,1276	0/0:70,0:69:99:0,181,2801	0/0:23,0:23:69.21:0,69,1077	0/0:32,0:32:96.32:0,96,1464	0/0:35,0:35:99:0,102,1581	0/0:3,0:3:9.03:0,9,144
chr10	92512545	.	AAC	A	3759.16	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.321;DP=902;FS=0.795;HRun=0;HaplotypeScore=159.2877;InbreedingCoeff=0.9888;MQ=62.39;MQ0=4;MQRankSum=-1.691;QD=19.28;ReadPosRankSum=2.687;VQSLOD=4.0600;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,21:29:37.66:633,38,0	1/1:2,12:14:33.02:383,33,0	0/0:21,0:11:8.99:0,9,78	0/0:26,0:22:31.98:0,32,273	0/0:29,1:30:37.01:0,37,1052	1/1:3,23:26:48.12:611,48,0	1/1:5,15:20:24.07:302,24,0	0/0:44,0:44:88.61:0,89,1270	0/0:32,0:32:81.16:0,81,1173	0/0:48,0:47:47.33:0,47,1658	0/0:31,0:31:75.21:0,75,1149	0/0:32,0:32:81.18:0,81,1188	0/0:29,0:29:78.24:0,78,1224	0/0:26,0:26:57.16:0,57,895	1/1:7,35:42:60.01:745,60,0	1/1:5,30:35:42.13:534,42,0	1/1:7,22:29:31.17:552,31,0	0/0:16,0:16:45.08:0,45,657	0/0:24,0:22:47.63:0,48,692	0/0:43,0:43:99:0,104,1660	0/0:41,0:41:90.64:0,91,1280	0/0:59,0:59:99:0,141,2069	0/0:32,0:32:70.87:0,71,1268	0/0:43,0:41:87.70:0,88,1334	0/0:33,0:33:84.29:0,84,1389	0/0:41,0:40:75.82:0,76,1491	0/0:26,0:27:65.90:0,66,896	0/0:29,0:29:78.19:0,78,1202
chr10	92512690	.	ACAGC	A	4689.78	PASS	AB=0.997;AC=41;AF=0.732;AN=56;BaseQRankSum=0.218;DP=906;FS=30.195;HRun=0;HaplotypeScore=259.9665;InbreedingCoeff=0.1120;MQ=55.49;MQ0=15;MQRankSum=1.893;QD=5.95;ReadPosRankSum=0.028;VQSLOD=2.5140;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:40,1:37:23.22:154,23,0	1/1:13,1:14:10.99:60,11,0	0/0:48,0:24:64.19:0,64,969	0/0:50,0:32:66.84:0,67,1155	0/1:37,0:37:45.34:118,0,45	1/1:31,1:32:12.07:108,12,0	0/1:26,0:26:7.27:68,0,7	0/1:31,0:31:20.52:99,0,21	0/1:32,0:32:92.91:110,0,93	1/1:13,31:43:33.98:627,34,0	1/1:16,4:20:15.45:220,15,0	1/1:21,9:30:46.56:535,47,0	1/1:10,21:31:18.44:271,18,0	1/1:16,3:19:20.55:224,21,0	1/1:51,0:49:20.20:150,20,0	1/1:41,0:41:15.55:122,16,0	1/1:23,0:22:3.39:117,3,0	1/1:5,15:19:0.03:70,0,0	0/1:17,0:17:74.11:74,0,213	0/1:22,0:21:22.60:61,0,23	0/1:49,0:47:63.22:86,0,63	1/1:9,20:29:20.42:324,20,0	1/1:9,26:35:11.73:190,12,0	1/1:11,36:47:36.40:573,36,0	1/1:7,22:29:9.97:145,10,0	0/1:42,1:43:99:128,0,188	0/1:25,0:23:54.01:56,0,54	0/0:20,0:20:9.79:0,10,113
chr10	92512701	.	GAC	G	2684.50	PASS	AB=0.983;AC=31;AF=0.554;AN=56;BaseQRankSum=3.711;DP=905;FS=2.981;HRun=0;HaplotypeScore=248.3165;InbreedingCoeff=0.0911;MQ=51.45;MQ0=20;MQRankSum=-0.185;QD=3.97;ReadPosRankSum=6.280;VQSLOD=2.3961;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,13:39:45.10:489,45,0	1/1:9,4:12:9.03:101,9,0	0/0:46,0:18:3.01:0,3,32	0/1:47,1:19:21.89:22,0,46	0/1:2,0:31:7.77:8,0,42	1/1:21,8:30:8.24:60,8,0	1/1:13,10:23:6.02:68,6,0	0/1:36,0:36:27.64:264,0,28	0/1:32,0:32:2.57:3,0,125	0/1:43,0:42:37.30:37,0,89	0/1:20,0:21:3.22:3,0,68	0/1:28,0:30:69.58:70,0,114	0/1:30,0:32:51.92:52,0,74	1/1:15,0:16:7.89:35,8,0	1/1:24,24:46:45.12:501,45,0	1/1:12,23:35:28.94:548,29,0	1/1:15,7:21:20.37:271,20,0	0/1:18,0:16:2.63:26,0,3	0/1:22,0:22:3.05:3,0,201	0/0:4,0:30:10.62:0,11,103	0/0:55,0:52:8.70:0,9,97	1/1:25,0:27:12.66:89,13,0	0/1:32,0:32:13.24:69,0,13	0/1:46,0:48:16.43:118,0,16	0/1:27,0:26:18.90:24,0,19	0/0:7,0:45:22.29:0,22,277	0/0:6,0:25:14.79:0,15,189	0/0:3,0:24:14.95:0,15,120
chr10	92512703	.	C	CAG	4116.82	PASS	AB=0.939;AC=26;AF=0.464;AN=56;BaseQRankSum=1.271;DP=890;FS=0.000;HRun=0;HaplotypeScore=245.5719;InbreedingCoeff=0.3360;MQ=50.57;MQ0=21;MQRankSum=-2.014;QD=7.42;ReadPosRankSum=2.514;VQSLOD=2.6371;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:37,4:37:70.65:539,71,0	1/1:11,1:11:22.86:147,23,0	0/0:45,0:14:34:0,34,349	0/0:49,0:18:20.05:0,20,426	1/1:24,0:24:8.39:82,8,0	1/1:28,1:29:33.47:254,33,0	1/1:27,0:27:22.20:172,22,0	0/1:28,9:38:99:256,0,385	0/1:33,0:33:23.32:395,0,23	0/0:42,0:41:99:0,114,766	0/0:23,0:23:15.91:0,16,192	0/0:30,0:30:74.80:0,75,531	0/0:32,0:32:42.21:0,42,259	0/0:12,0:12:23.47:0,23,161	1/1:50,1:48:97.48:726,97,0	1/1:36,0:36:29.47:316,29,0	1/1:20,1:20:23.57:240,24,0	0/1:18,0:16:2.70:3,0,69	0/1:11,10:23:36.06:260,0,36	0/1:28,1:28:20.03:20,0,81	0/1:56,0:53:15.60:250,0,16	0/0:27,0:27:38.01:0,38,249	0/1:31,1:32:1.65:2,0,169	0/0:47,0:47:57.45:0,57,348	0/0:27,1:27:25.31:0,25,158	0/1:41,0:41:99:329,0,131	0/1:23,0:21:19.62:20,0,72	0/1:21,0:21:6.96:108,0,7
chr10	92513058	.	G	GCGCA	710.81	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-3.753;DP=535;FS=6.665;HRun=0;HaplotypeScore=144.2178;InbreedingCoeff=0.1954;MQ=60.92;MQ0=3;MQRankSum=2.041;QD=5.97;ReadPosRankSum=0.402;VQSLOD=2.3025;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:73.90:0,74,937	0/0:10,0:10:8.97:0,9,77	0/0:8,0:7:5.84:0,6,35	0/0:4,0:5:3.01:0,3,36	0/0:23,0:23:36.11:0,36,560	0/0:24,0:24:51.07:0,51,527	0/0:30,0:29:38.95:0,39,446	1/1:6,22:28:56.97:777,57,0	0/0:13,0:13:27.07:0,27,410	0/0:28,0:28:4.47:0,4,185	0/0:27,0:27:1.75:0,2,110	0/0:17,0:17:5.64:0,6,126	0/0:9,0:9:12.95:0,13,176	0/1:12,0:12:2.54:14,0,3	0/0:10,0:10:18.04:0,18,188	0/0:10,0:10:18.03:0,18,181	0/0:39,0:39:78.11:0,78,826	0/1:27,0:26:9.62:10,0,80	0/0:12,0:12:24.50:0,25,297	0/0:23,0:23:30.05:0,30,427	0/0:16,0:16:6.02:0,6,99	0/1:16,0:16:11.07:12,0,11	0/0:17,0:17:5.34:0,5,84	0/1:11,0:11:5.23:5,0,10	0/1:25,0:23:19.02:19,0,36	0/0:30,0:30:53.70:0,54,917	0/0:8,0:8:19.56:0,20,242	0/0:13,0:13:21.05:0,21,330
chr10	92513062	.	A	ACG	3855.99	PASS	AB=0.762;AC=18;AF=0.333;AN=54;BaseQRankSum=-12.211;DP=524;FS=1.039;HRun=0;HaplotypeScore=117.0841;InbreedingCoeff=0.6025;MQ=58.79;MQ0=3;MQRankSum=4.554;QD=17.77;ReadPosRankSum=-0.168;VQSLOD=3.7954;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:56.72:0,57,280	0/0:3,0:10:5.33:0,5,23	0/0:5,0:4:0.47:0,0,1	./.	0/0:24,0:24:32.80:0,33,242	0/0:4,0:21:39.77:0,40,196	0/0:8,0:29:27.52:0,28,138	0/1:25,0:25:96.38:96,0,118	0/0:14,0:14:23.78:0,24,167	1/1:7,20:28:58.48:777,58,0	0/1:10,18:29:12.81:321,0,13	1/1:6,10:16:18.06:294,18,0	0/1:8,1:9:37.81:38,0,49	0/1:2,10:12:9.57:368,0,10	0/0:1,0:10:14.20:0,14,70	0/0:2,0:9:11.36:0,11,56	0/0:6,0:38:62.50:0,62,308	1/1:8,21:29:32.89:544,33,0	0/0:11,0:11:11.94:0,12,93	0/0:21,0:21:26.72:0,27,184	0/0:14,0:14:5.96:0,6,45	1/1:1,15:16:21.07:346,21,0	1/1:5,11:16:9.17:149,9,0	1/1:2,10:13:17.94:281,18,0	1/1:5,18:21:39.13:642,39,0	0/0:32,0:32:54.31:0,54,381	0/0:9,0:9:20.54:0,21,132	0/0:13,0:13:17.87:0,18,128
chr10	92513072	.	GCGCA	G	1783.94	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=6.550;DP=506;FS=12.084;HRun=0;HaplotypeScore=129.0979;InbreedingCoeff=0.1347;MQ=59.08;MQ0=4;MQRankSum=-6.717;QD=7.93;ReadPosRankSum=4.257;VQSLOD=2.0141;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,40:41:60.21:1189,60,0	0/0:7,0:7:4.56:0,5,20	0/1:9,0:6:0.94:1,0,42	0/1:7,0:6:0.63:1,0,3	0/1:20,0:20:69.92:77,0,70	0/0:17,0:17:37.25:0,37,147	0/1:23,0:22:32.13:32,0,101	0/0:22,0:22:59.90:0,60,791	0/1:14,0:14:1.31:94,0,1	0/0:26,0:26:54.22:0,54,1153	0/0:28,0:28:36.04:0,36,599	0/0:17,0:17:33.04:0,33,484	0/1:8,0:8:0.15:0,0,257	0/0:12,0:12:30.09:0,30,587	0/0:10,0:10:16.10:0,16,77	0/0:10,0:10:19.51:0,20,135	0/0:36,0:36:8.05:0,8,238	0/0:25,0:24:38.74:0,39,705	0/1:12,0:12:38.34:38,0,74	0/1:21,0:21:10.64:116,0,11	0/1:20,0:20:15.19:15,0,18	0/0:19,0:19:32.90:0,33,508	0/0:13,0:13:15.43:0,15,242	0/0:15,0:15:26.80:0,27,435	0/0:24,0:22:45.10:0,45,826	0/1:30,0:30:40.99:225,0,41	1/1:8,0:8:2.15:94,2,0	0/1:12,0:12:2.80:50,0,3
chr10	92513074	.	GCACACACA	G	4226.05	PASS	AB=0.789;AC=16;AF=0.286;AN=56;BaseQRankSum=7.691;DP=511;FS=15.119;HRun=0;HaplotypeScore=149.4880;InbreedingCoeff=0.7791;MQ=59.36;MQ0=4;MQRankSum=-6.088;QD=28.17;ReadPosRankSum=0.581;VQSLOD=3.6747;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:60.19:0,60,805	0/0:7,0:7:5.27:0,5,168	0/0:8,0:6:12:0,12,270	0/1:9,0:7:4.27:4,0,172	1/1:6,17:23:18.06:481,18,0	0/0:17,0:17:42.14:0,42,1238	0/0:22,0:22:30.10:0,30,869	0/0:23,0:23:66.22:0,66,2221	1/1:2,12:14:21.07:561,21,0	0/0:25,0:25:69.24:0,69,2463	0/0:27,0:27:33.11:0,33,1231	0/0:15,0:15:27.09:0,27,964	0/0:9,0:9:16.58:0,17,639	0/0:13,0:13:33.11:0,33,1241	0/0:10,0:10:18.06:0,18,562	0/0:10,0:10:21.07:0,21,672	0/0:38,0:38:78.27:0,78,2326	0/0:24,0:23:38.96:0,39,1422	0/1:3,8:11:57.87:304,0,58	1/1:4,17:21:21.07:562,21,0	1/1:5,17:22:3.01:80,3,0	0/0:17,0:17:30.10:0,30,1106	0/0:16,0:16:18.16:0,18,642	0/0:14,0:14:26.81:0,27,957	0/0:24,0:22:51.18:0,51,1836	1/1:4,25:29:62.47:1349,62,0	1/1:2,7:9:18.06:482,18,0	1/1:1,11:12:15.05:402,15,0
chr10	92513741	.	TACAC	T	6722.19	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-0.168;DP=753;FS=0.814;HRun=0;HaplotypeScore=152.2349;InbreedingCoeff=0.9694;MQ=57.80;MQ0=6;MQRankSum=0.323;QD=22.63;ReadPosRankSum=2.548;VQSLOD=4.8809;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:49:57.36:0,57,1029	0/0:1,0:5:5.49:0,5,25	0/0:40,0:11:23.95:0,24,458	0/0:23,0:8:9.48:0,9,134	1/1:8,6:14:15.52:245,16,0	1/1:7,23:30:25.59:709,26,0	1/1:6,15:21:18.05:297,18,0	0/0:34,0:34:56.92:0,57,1198	1/1:7,14:22:34.08:578,34,0	0/0:26,0:29:59.41:0,59,1204	0/0:21,0:21:30.10:0,30,731	0/0:27,0:29:42.10:0,42,999	0/0:16,0:16:20.80:0,21,478	0/0:26,0:26:48.16:0,48,1154	0/0:3,0:21:27.34:0,27,124	1/1:6,15:22:39.60:628,40,0	0/0:7,0:30:41.34:0,41,203	0/0:19,0:19:23.79:0,24,474	1/1:13,9:22:27.06:375,27,0	1/1:7,12:20:24.06:396,24,0	1/1:20,57:75:81.36:1659,81,0	0/0:28,0:28:42.13:0,42,952	0/0:19,0:20:38.65:0,39,790	0/0:38,0:39:56.73:0,57,1295	0/0:23,0:25:32.85:0,33,694	1/1:14,26:40:31.28:1140,31,0	1/1:10,5:17:18.01:250,18,0	1/1:3,9:12:27.09:445,27,0
chr10	92513779	.	GAC	G	381.11	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.552;DP=812;FS=1.473;HRun=0;HaplotypeScore=197.8243;InbreedingCoeff=0.7541;MQ=53.07;MQ0=32;MQRankSum=-3.526;QD=5.77;ReadPosRankSum=1.573;VQSLOD=3.4154;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,1:42:58.66:0,59,935	1/1:10,0:9:0.28:52,0,0	0/0:49,0:16:23.65:0,24,235	0/0:46,0:12:21:0,21,264	0/0:10,0:10:24.03:0,24,369	0/0:35,0:35:50.48:0,50,659	0/0:23,0:22:30.52:0,31,371	0/0:38,0:33:84.04:0,84,1193	0/0:30,0:27:54.70:0,55,736	0/0:21,0:19:51.13:0,51,725	0/0:20,0:19:27:0,27,376	0/0:29,0:27:23.99:0,24,304	0/0:13,0:12:15.41:0,15,178	0/0:26,0:26:41.65:0,42,512	1/1:23,5:28:33.23:251,33,0	0/0:30,0:30:1.59:0,2,262	1/1:27,1:28:27.87:207,28,0	0/0:26,1:25:1.35:0,1,232	0/0:26,1:24:21.15:0,21,784	0/0:17,1:18:26.88:0,27,349	0/0:77,0:75:99:0,120,1812	0/0:30,0:27:36.22:0,36,500	0/0:24,0:23:33.93:0,34,397	0/0:44,0:44:39.13:0,39,523	0/0:25,0:23:18.02:0,18,225	0/0:32,1:32:47.15:0,47,1258	0/0:18,0:18:42.14:0,42,663	0/0:11,0:10:24.08:0,24,365
chr10	92513789	.	C	CAG	1176.64	PASS	AB=0.959;AC=8;AF=0.143;AN=56;BaseQRankSum=5.039;DP=805;FS=0.520;HRun=0;HaplotypeScore=206.5175;InbreedingCoeff=0.4080;MQ=50.96;MQ0=40;MQRankSum=-3.523;QD=7.26;ReadPosRankSum=2.890;VQSLOD=3.3010;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:43.72:0,44,823	1/1:11,1:10:16.84:180,17,0	0/0:34,0:9:23.71:0,24,287	0/0:38,0:9:21.04:0,21,261	0/0:11,0:11:24.02:0,24,344	0/1:36,0:36:22.52:23,0,219	0/1:22,0:21:99:115,0,121	0/0:40,0:32:90.61:0,91,1149	0/0:31,0:28:63.07:0,63,824	0/0:26,0:23:62.48:0,62,686	0/0:20,0:19:26.62:0,27,375	0/0:27,0:25:29.05:0,29,364	0/0:16,0:15:20.73:0,21,251	0/0:27,0:27:41.94:0,42,579	0/1:27,5:32:54.75:399,0,55	0/1:32,1:31:72.32:72,0,160	1/1:24,3:27:25.50:535,26,0	0/0:26,0:24:25.19:0,25,315	0/0:29,0:25:48:0,48,852	0/0:18,0:18:29.76:0,30,381	0/0:72,0:70:99:0,124,1749	0/0:30,0:27:37.06:0,37,536	0/0:26,0:25:39.05:0,39,517	0/0:44,0:44:49.91:0,50,698	0/0:23,0:21:18.02:0,18,211	0/0:36,0:34:96.71:0,97,1332	0/0:20,0:20:44.86:0,45,661	0/0:10,0:8:24.08:0,24,363
chr10	92513797	.	C	CAT	4724.58	PASS	AB=0.931;AC=21;AF=0.375;AN=56;BaseQRankSum=-7.824;DP=778;FS=3.369;HRun=0;HaplotypeScore=190.1461;InbreedingCoeff=0.8638;MQ=50.34;MQ0=40;MQRankSum=2.697;QD=15.05;ReadPosRankSum=-1.913;VQSLOD=4.2399;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:67.58:0,68,789	0/0:12,0:10:17.57:0,18,127	0/0:20,0:4:11.96:0,12,123	0/0:25,0:6:2.15:0,2,42	0/0:14,0:14:29.80:0,30,335	0/0:35,0:35:29.03:0,29,292	0/0:22,0:21:21.77:0,22,125	1/1:13,28:33:67.08:1012,67,0	0/0:30,0:27:56.03:0,56,588	1/1:29,3:29:65.48:938,65,0	1/1:16,3:18:11.17:256,11,0	1/1:26,3:27:18.34:293,18,0	1/1:15,1:15:2.10:122,2,0	1/1:27,0:27:32.36:343,32,0	0/0:26,0:26:49.40:0,49,395	0/0:32,0:29:34.40:0,34,275	0/0:25,0:25:41.85:0,42,284	0/1:25,2:25:1.84:333,0,2	0/0:29,0:25:71.40:0,71,727	0/0:18,0:18:36.05:0,36,476	0/0:73,0:69:99:0,115,1495	1/1:29,1:27:32.30:364,32,0	1/1:24,1:24:6.33:262,6,0	1/1:46,0:46:23.60:599,24,0	1/1:21,1:20:12.04:203,12,0	0/0:33,0:31:90.20:0,90,1122	0/0:19,0:19:41.79:0,42,559	0/0:12,0:10:27.44:0,27,311
chr10	92513803	.	CACACACACAG	C	1731.44	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=2.920;DP=746;FS=3.424;HRun=0;HaplotypeScore=256.4682;InbreedingCoeff=0.0773;MQ=50.66;MQ0=37;MQRankSum=-4.682;QD=4.45;ReadPosRankSum=-2.826;VQSLOD=2.2281;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:38:99:112,0,339	0/0:12,0:10:13.79:0,14,77	1/1:10,0:2:2.50:9,2,0	0/1:13,0:3:0:0,0,0	0/0:15,0:15:2.93:0,3,273	1/1:33,2:35:34.41:333,34,0	1/1:21,1:21:19.56:222,20,0	0/1:37,0:29:61.72:91,0,62	0/0:30,0:27:38.89:0,39,759	0/1:32,0:29:51.55:52,0,263	0/1:20,0:19:0.48:0,0,129	0/0:29,0:27:0.57:0,1,158	0/1:16,0:15:6.52:7,0,130	0/1:23,0:23:18.59:19,0,222	0/1:24,0:24:91.82:92,0,115	1/1:9,20:26:35.40:910,35,0	0/1:25,0:25:9.06:9,0,91	0/1:27,0:25:21.21:21,0,167	0/0:33,0:28:49.64:0,50,696	0/0:18,0:18:36.32:0,36,822	0/0:75,0:72:98.13:0,98,2245	0/0:29,0:26:2.62:0,3,167	0/0:22,0:21:18.05:0,18,370	0/0:45,0:45:9.93:0,10,499	0/1:23,0:21:15.83:16,0,49	0/0:32,0:29:53.48:0,53,1358	0/0:17,0:17:42.22:0,42,874	0/1:14,0:12:1.31:1,0,373
chr10	92513809	.	CACAG	C	1842.89	PASS	AB=1.000;AC=30;AF=0.556;AN=54;BaseQRankSum=6.546;DP=711;FS=4.193;HRun=0;HaplotypeScore=193.4047;InbreedingCoeff=0.3690;MQ=49.72;MQ0=33;MQRankSum=-1.125;QD=3.92;ReadPosRankSum=-0.295;VQSLOD=2.3655;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:38:99:104,0,291	0/0:11,0:9:13.58:0,14,66	1/1:6,0:1:2.04:6,2,0	./.	0/0:14,0:14:2.79:0,3,182	1/1:30,1:31:26.71:220,27,0	1/1:22,0:21:15.38:207,15,0	1/1:33,0:25:8.46:205,8,0	0/0:29,0:26:17.02:0,17,408	0/1:31,0:28:5.73:224,0,6	0/1:20,0:19:11.72:48,0,12	1/1:26,2:26:12.98:110,13,0	0/1:18,0:17:5.17:31,0,5	1/1:21,1:22:17.63:77,18,0	0/1:23,0:23:7.24:7,0,95	1/1:28,0:25:35.21:292,35,0	0/1:24,0:24:23.08:23,0,84	1/1:26,0:24:30.79:157,31,0	0/0:35,0:29:36.32:0,36,446	0/0:17,0:17:35.97:0,36,525	0/0:79,0:75:96.31:0,96,1405	1/1:24,0:22:11.11:48,11,0	0/1:19,0:18:12.46:44,0,12	1/1:41,1:42:32.83:149,33,0	1/1:22,1:21:10.22:39,10,0	0/0:32,0:29:18.52:0,19,747	0/0:18,0:18:17.98:0,18,417	0/1:11,0:9:39.91:40,0,177
chr10	92513811	.	CAG	C	3172.71	PASS	AB=0.892;AC=34;AF=0.607;AN=56;BaseQRankSum=4.675;DP=711;FS=6.240;HRun=0;HaplotypeScore=170.6428;InbreedingCoeff=0.3043;MQ=49.50;MQ0=34;MQRankSum=1.030;QD=6.00;ReadPosRankSum=0.168;VQSLOD=2.2852;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:39:99:137,0,278	0/0:10,0:8:13.60:0,14,67	1/1:8,0:1:2.04:6,2,0	0/0:10,0:2:2.60:0,3,10	0/0:14,0:14:1.57:0,2,134	1/1:30,1:31:34.48:229,34,0	1/1:23,0:22:18.69:230,19,0	1/1:29,0:21:5.77:180,6,0	0/1:29,0:26:16.45:16,0,208	1/1:11,20:28:21.48:454,21,0	0/1:5,14:18:13.26:51,0,13	1/1:6,22:26:13.77:205,14,0	0/1:4,14:17:4.13:99,0,4	1/1:2,20:22:20.85:214,21,0	0/1:21,0:21:17.71:18,0,95	1/1:28,0:25:34.86:223,35,0	0/1:25,0:25:56.79:57,0,74	1/1:8,18:24:18.50:313,18,0	0/0:32,0:26:38.17:0,38,379	0/0:18,0:18:13.25:0,13,367	0/0:79,0:75:89.23:0,89,1136	1/1:3,21:22:11.24:138,11,0	1/1:4,15:18:10.82:219,11,0	1/1:4,38:42:37.27:444,37,0	1/1:5,18:21:10.43:72,10,0	0/1:32,0:29:13.31:13,0,561	0/0:19,0:19:24.02:0,24,289	0/1:11,0:9:41.90:42,0,131
chr10	92513813	.	G	GAC	744.77	PASS	AB=0.980;AC=16;AF=0.296;AN=54;BaseQRankSum=-0.559;DP=702;FS=9.741;HRun=0;HaplotypeScore=179.5049;InbreedingCoeff=-0.0556;MQ=49.38;MQ0=34;MQRankSum=-1.367;QD=2.18;ReadPosRankSum=-1.983;VQSLOD=1.5037;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:39:9.04:40,0,9	0/1:11,0:9:0:0,0,0	./.	0/0:12,0:1:2.60:0,3,10	0/1:12,1:13:17.42:101,0,17	0/0:28,0:28:5.91:0,6,27	1/1:24,0:23:5.83:45,6,0	1/1:29,0:21:0.35:1,0,0	0/1:22,3:22:0.66:220,0,1	0/1:30,0:27:19.48:19,0,27	0/0:19,0:18:0.30:0,0,0	0/1:28,0:26:1.70:2,0,21	0/0:18,0:17:5.13:0,5,23	0/0:22,0:22:10.68:0,11,47	0/1:21,0:22:4.03:4,0,101	0/1:27,0:25:22.25:22,0,30	0/1:24,0:24:13.45:33,0,13	0/1:24,0:24:3.89:4,0,34	0/0:31,0:25:1.81:0,2,152	0/0:17,0:18:7.10:0,7,258	0/0:77,0:74:53.35:0,53,748	0/0:23,0:21:5.98:0,6,23	0/0:18,0:18:14.58:0,15,63	0/0:43,0:44:24.17:0,24,101	0/0:23,0:21:2.68:0,3,11	0/1:28,2:27:82.33:251,0,82	0/0:17,0:18:25.02:0,25,210	0/1:11,0:9:49.23:134,0,49
chr10	92514991	.	A	ATGGC	3049.96	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=10.613;DP=498;FS=30.291;HRun=0;HaplotypeScore=115.1554;InbreedingCoeff=0.9870;MQ=88.32;MQ0=0;MQRankSum=-10.505;QD=52.59;ReadPosRankSum=-0.266;VQSLOD=1.9657;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:17:36.12:773,36,0	./.	0/0:22,0:21:59.23:0,59,1136	0/0:23,0:24:33.45:0,33,1181	0/0:25,0:25:69.19:0,69,1403	1/1:0,8:8:24.08:565,24,0	1/1:1,10:11:30.10:683,30,0	0/0:24,0:24:72.24:0,72,1474	0/0:22,0:22:63.20:0,63,1270	0/0:31,0:31:93.32:0,93,1947	0/0:9,0:9:27.09:0,27,566	0/0:20,0:20:60.17:0,60,1213	0/0:24,0:24:72.23:0,72,1471	0/0:24,0:24:66.22:0,66,1345	1/1:0,6:6:18.06:420,18,0	1/1:2,5:7:21.06:436,21,0	1/1:1,8:8:15.05:357,15,0	0/0:21,0:21:60.21:0,60,1238	0/0:17,0:17:48.15:0,48,933	0/0:33,0:33:99:0,99,2050	0/0:37,0:37:99:0,99,2049	0/0:15,0:15:45.15:0,45,941	0/0:19,0:19:54.19:0,54,1129	0/0:18,0:18:54.19:0,54,1133	0/0:5,0:5:15.05:0,15,314	0/0:26,0:26:78.26:0,78,1601	0/0:19,0:19:51.18:0,51,1070	0/0:5,0:5:15.05:0,15,314
chr10	92514994	.	A	AGC	1892.68	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=11.118;DP=500;FS=29.487;HRun=0;HaplotypeScore=99.6306;InbreedingCoeff=0.9845;MQ=86.85;MQ0=0;MQRankSum=-10.488;QD=35.71;ReadPosRankSum=0.818;VQSLOD=2.6164;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:15:33.11:503,33,0	./.	0/0:24,0:22:39.78:0,40,877	0/0:23,0:23:60.67:0,61,939	0/0:26,0:26:72.23:0,72,1144	1/1:0,8:8:24.08:381,24,0	1/1:0,10:10:29.59:432,30,0	0/0:24,0:24:72.24:0,72,1148	0/0:22,0:22:66.21:0,66,1040	0/0:30,0:30:90.31:0,90,1467	0/0:10,0:10:27.09:0,27,434	0/0:20,0:20:60.18:0,60,922	0/0:24,0:24:72.23:0,72,1145	0/0:24,0:24:69.19:0,69,1070	1/1:0,6:6:18.06:282,18,0	1/1:1,5:6:15.05:238,15,0	1/1:0,8:7:15.05:240,15,0	0/0:21,0:21:63.21:0,63,1013	0/0:15,0:15:42.13:0,42,660	0/0:35,0:35:99:0,102,1601	0/0:37,0:37:99:0,108,1724	0/0:18,0:18:48.15:0,48,752	0/0:18,0:18:54.17:0,54,851	0/0:19,0:19:57.18:0,57,905	0/0:5,0:5:15.05:0,15,237	0/0:26,0:26:78.27:0,78,1273	0/0:21,0:21:63.18:0,63,967	0/0:5,0:5:15.05:0,15,245
chr10	92515005	.	A	ACGCACTG	5934.63	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=6.717;DP=502;FS=13.125;HRun=0;HaplotypeScore=141.2070;InbreedingCoeff=0.9716;MQ=74.14;MQ0=1;MQRankSum=-11.292;QD=65.22;ReadPosRankSum=-0.605;VQSLOD=4.0201;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:17:21.07:744,21,0	1/1:0,3:3:9.03:346,9,0	0/0:17,0:15:37.93:0,38,795	0/0:18,0:17:42.11:0,42,846	0/0:28,0:28:57.15:0,57,1290	1/1:5,10:15:36.12:1384,36,0	1/1:7,9:15:27.09:1036,27,0	0/0:22,0:22:57.14:0,57,1273	0/0:20,0:20:51.17:0,51,1207	0/0:27,0:27:75.26:0,75,1825	0/0:10,0:10:21.06:0,21,469	0/0:19,0:19:51.17:0,51,1257	0/0:19,0:19:51.17:0,51,1256	0/0:23,0:23:63.19:0,63,1445	1/1:4,4:11:12.04:462,12,0	1/1:2,11:13:36.12:1385,36,0	1/1:6,6:13:15.05:578,15,0	0/0:22,0:22:60.19:0,60,1403	0/0:12,0:12:24.05:0,24,499	0/0:31,0:31:78.27:0,78,1923	0/0:36,0:36:96.31:0,96,2266	0/0:17,0:17:45.14:0,45,1054	0/0:18,0:18:48.15:0,48,1113	0/0:18,0:18:45.15:0,45,1096	0/0:6,0:6:18.06:0,18,441	0/0:22,0:22:57.20:0,57,1405	0/0:22,0:22:57.20:0,57,1378	0/0:4,0:4:12.04:0,12,296
chr10	92515101	.	CAA	C	285.99	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=4.886;DP=397;FS=2.622;HRun=2;HaplotypeScore=82.5735;InbreedingCoeff=0.7914;MQ=51.54;MQ0=13;MQRankSum=-5.387;QD=12.43;ReadPosRankSum=0.252;VQSLOD=0.7466;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:3:2.94:0,3,18	1/1:0,1:1:3.01:40,3,0	0/0:19,0:5:15.05:0,15,257	0/0:19,0:6:18.02:0,18,266	0/0:31,0:31:80.70:0,81,1052	1/1:1,8:9:18.06:258,18,0	./.	0/0:19,0:17:43.48:0,43,542	0/0:12,0:12:27.05:0,27,342	0/0:26,0:26:76.69:0,77,1279	0/0:15,0:15:44.93:0,45,711	0/0:15,0:14:36.11:0,36,645	0/0:5,0:5:15.02:0,15,230	0/0:14,0:13:38.94:0,39,642	1/1:0,3:3:3.01:44,3,0	1/1:0,4:3:8.89:76,9,0	1/1:4,2:4:2.04:6,2,0	0/0:23,0:23:57.12:0,57,914	0/0:19,0:14:37.25:0,37,442	0/0:19,0:19:42.07:0,42,564	0/0:17,0:17:36.08:0,36,457	0/0:13,0:13:29.09:0,29,398	0/0:11,0:11:24.07:0,24,427	0/0:25,0:25:75.22:0,75,1355	0/0:17,0:17:47.80:0,48,764	0/0:27,0:25:73.47:0,73,930	0/0:9,0:9:17.09:0,17,222	0/0:9,0:9:21.07:0,21,304
chr10	92515112	.	AC	A	4912.58	PASS	AB=0.990;AC=41;AF=0.732;AN=56;BaseQRankSum=-3.583;DP=392;FS=9.585;HRun=1;HaplotypeScore=61.3279;InbreedingCoeff=0.1603;MQ=52.45;MQ0=9;MQRankSum=-2.519;QD=14.24;ReadPosRankSum=-4.056;VQSLOD=2.0614;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:3:2.97:20,3,0	1/1:1,0:1:1.82:5,2,0	0/0:17,0:7:14.41:0,14,167	0/0:17,0:8:24.01:0,24,255	1/1:1,27:28:66.80:846,67,0	1/1:10,0:10:23.40:145,23,0	1/1:3,0:1:2.99:24,3,0	1/1:21,0:19:34.67:232,35,0	1/1:0,10:10:21.07:291,21,0	0/1:28,0:28:14.64:20,0,15	0/1:13,0:13:12.49:30,0,12	0/0:13,0:12:10.30:0,10,29	0/1:10,0:10:14.14:14,0,23	0/1:16,1:16:10.82:90,0,11	1/1:4,0:3:3.01:33,3,0	1/1:6,0:5:12.40:90,12,0	1/1:10,0:8:4.19:23,4,0	0/1:18,0:18:30.35:30,0,53	1/1:8,12:16:40.22:468,40,0	1/1:0,18:18:42:498,42,0	1/1:0,15:15:27.09:371,27,0	0/1:11,0:11:1.92:69,0,2	0/1:10,0:10:5.84:6,0,9	0/1:24,1:25:32.07:83,0,32	0/1:14,0:14:4.44:55,0,4	1/1:2,25:25:69.98:928,70,0	1/1:1,9:10:18.06:249,18,0	1/1:0,9:9:21.07:292,21,0
chr10	92515245	.	A	AT	352.40	PASS	AB=0.845;AC=8;AF=0.143;AN=56;BaseQRankSum=5.746;DP=367;FS=3.134;HRun=0;HaplotypeScore=77.2819;InbreedingCoeff=0.3782;MQ=57.40;MQ0=8;MQRankSum=-2.829;QD=5.34;ReadPosRankSum=1.511;VQSLOD=3.4646;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:7.43:0,7,110	1/1:0,3:3:8.94:67,9,0	0/1:5,0:5:8.13:8,0,94	0/0:6,0:6:14.20:0,14,120	0/0:9,0:9:21.07:0,21,292	0/1:14,0:14:17.94:18,0,33	0/0:5,0:5:8.53:0,9,50	0/0:29,0:25:66.19:0,66,861	0/0:12,0:11:30.09:0,30,403	0/0:16,0:16:48.12:0,48,620	0/0:8,0:7:18.05:0,18,220	0/0:12,0:12:36.09:0,36,457	0/0:9,0:9:24.01:0,24,311	0/0:6,0:6:18.06:0,18,249	0/1:5,3:6:4.85:65,0,5	1/1:4,0:4:5.45:16,5,0	0/1:15,17:29:60.25:311,0,60	0/0:24,0:24:72.17:0,72,938	0/0:25,0:21:63.16:0,63,811	0/0:18,0:18:54.14:0,54,690	0/0:10,0:10:24.08:0,24,334	0/0:8,0:8:21.03:0,21,270	0/0:11,0:11:33.10:0,33,444	0/0:21,0:21:60.19:0,60,821	0/0:9,0:9:24.08:0,24,335	0/0:17,0:17:48.16:0,48,669	0/0:18,0:17:50.96:0,51,633	0/0:10,0:10:30.09:0,30,402
chr10	92515246	.	A	AAT	1052.89	PASS	AB=0.955;AC=12;AF=0.214;AN=56;BaseQRankSum=2.895;DP=363;FS=4.699;HRun=0;HaplotypeScore=81.5440;InbreedingCoeff=0.4013;MQ=57.45;MQ0=7;MQRankSum=-1.928;QD=10.74;ReadPosRankSum=-0.153;VQSLOD=2.9911;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:80.20:112,0,80	1/1:0,3:3:9.03:113,9,0	0/1:5,0:5:11.91:12,0,125	0/0:6,0:6:13.11:0,13,118	0/0:10,0:10:21.07:0,21,289	0/1:14,0:14:35.14:69,0,35	0/1:5,0:5:3.78:49,0,4	0/0:28,0:25:69.19:0,69,877	0/0:12,0:11:30.09:0,30,407	0/0:16,0:16:45.12:0,45,592	0/0:8,0:7:18.04:0,18,213	0/0:12,0:12:33.06:0,33,409	0/1:9,0:9:1.93:2,0,252	0/0:6,0:6:18.05:0,18,221	0/1:5,3:6:13.93:124,0,14	1/1:4,0:4:8.97:70,9,0	1/1:15,17:29:17.54:661,18,0	0/0:23,0:23:64.45:0,64,859	0/0:24,0:20:60.16:0,60,787	0/0:18,0:18:54.08:0,54,662	0/0:10,0:10:27.08:0,27,365	0/0:8,0:8:21.02:0,21,252	0/0:11,0:11:33.10:0,33,442	0/0:21,0:21:63.18:0,63,814	0/0:9,0:9:27.07:0,27,345	0/0:16,0:16:48.15:0,48,640	0/0:17,0:16:48.13:0,48,610	0/0:10,0:10:27.09:0,27,384
chr10	92515252	.	T	TAAG	1206.49	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=3.406;DP=379;FS=6.678;HRun=0;HaplotypeScore=93.4834;InbreedingCoeff=0.6049;MQ=58.04;MQ0=3;MQRankSum=-2.457;QD=10.05;ReadPosRankSum=1.015;VQSLOD=2.7720;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,6:20:8.50:410,8,0	1/1:3,0:3:9.03:105,9,0	0/0:6,0:6:14.08:0,14,200	0/0:8,0:7:15.04:0,15,217	0/0:12,0:12:32.94:0,33,413	0/1:15,0:15:58.69:59,0,73	0/0:7,0:7:6.88:0,7,44	0/0:29,0:27:72.15:0,72,1107	0/0:14,0:13:36.08:0,36,539	0/0:16,0:16:13.37:0,13,266	0/0:8,0:8:20.89:0,21,170	0/1:11,0:11:1.54:2,0,138	0/1:7,0:7:4.24:4,0,84	0/0:5,0:5:10.53:0,11,85	1/1:7,0:5:11.95:130,12,0	1/1:5,0:5:8.60:53,9,0	1/1:30,0:29:39.03:604,39,0	0/0:25,0:25:24.84:0,25,465	0/0:25,0:22:63.20:0,63,985	0/0:16,0:16:48:0,48,698	0/0:11,0:11:32.83:0,33,474	0/0:7,0:7:11.97:0,12,96	0/0:11,0:11:29.90:0,30,239	0/1:22,0:22:6.03:6,0,341	0/0:10,0:10:23.92:0,24,217	0/0:17,0:17:51.08:0,51,725	0/0:22,0:22:57.11:0,57,801	0/0:10,0:10:30.08:0,30,481
chr10	92515258	.	T	TAAG	2506.18	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-6.143;DP=380;FS=0.450;HRun=0;HaplotypeScore=88.3473;InbreedingCoeff=-0.1483;MQ=63.09;MQ0=1;MQRankSum=-0.973;QD=8.22;ReadPosRankSum=-7.836;VQSLOD=0.2197;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:22.61:498,23,0	0/1:4,0:4:12.92:93,0,13	0/0:8,0:8:7.83:0,8,127	0/0:9,0:8:13.58:0,14,132	0/1:12,0:12:79.50:89,0,79	1/1:3,13:17:12.04:252,12,0	1/1:8,0:8:20.99:219,21,0	0/1:27,0:27:78.47:78,0,185	0/1:13,0:13:22.41:22,0,114	0/0:16,0:16:4.13:0,4,120	0/1:8,0:8:30.97:31,0,47	0/1:10,0:10:24.41:24,0,89	0/0:5,0:5:11.92:0,12,98	0/1:5,0:5:12.65:13,0,53	1/1:6,0:4:11.97:130,12,0	1/1:0,5:5:9.03:189,9,0	1/1:30,0:29:54.12:624,54,0	0/1:27,0:27:66.90:67,0,275	0/1:27,0:26:95.94:96,0,118	0/1:17,0:17:37.77:38,0,129	0/1:11,0:11:22.90:23,0,103	0/0:6,0:6:9.78:0,10,72	0/0:11,0:11:6.46:0,6,152	0/0:20,0:20:7.68:0,8,226	0/1:9,0:9:27.58:28,0,97	0/1:15,0:15:40.21:40,0,133	0/1:20,0:20:69.84:70,0,138	0/1:13,0:13:57.34:57,0,139
chr10	92515427	.	AT	A	3193.94	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.553;DP=407;FS=1.512;HRun=2;HaplotypeScore=38.3417;InbreedingCoeff=0.9719;MQ=71.93;MQ0=0;MQRankSum=-4.239;QD=31.01;ReadPosRankSum=3.275;VQSLOD=3.1220;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:84.21:1065,84,0	1/1:0,7:7:18.06:232,18,0	0/0:12,0:8:21.06:0,21,297	0/0:9,0:9:11.55:0,12,157	0/0:21,0:21:60.18:0,60,855	1/1:0,13:13:33.11:425,33,0	1/1:0,5:5:12.04:155,12,0	0/0:21,0:21:60.18:0,60,824	0/0:13,0:13:39.13:0,39,583	0/0:28,0:28:78.25:0,78,1132	0/0:16,0:16:48.16:0,48,717	0/0:5,0:5:15.05:0,15,221	0/0:13,0:13:39.11:0,39,545	0/0:7,0:7:21.05:0,21,276	1/1:0,11:11:30.10:388,30,0	1/1:0,6:6:15.05:194,15,0	1/1:0,29:29:72.23:931,72,0	0/0:18,0:18:54.16:0,54,781	0/0:18,0:18:51.17:0,51,746	0/0:14,0:14:42.07:0,42,563	0/0:4,0:4:12.01:0,12,139	0/0:8,0:8:24.07:0,24,340	0/0:7,0:7:21.07:0,21,314	0/0:7,0:7:21.05:0,21,293	0/0:24,0:24:69.22:0,69,1009	0/0:17,0:17:48.10:0,48,657	0/0:22,0:22:66.20:0,66,963	0/0:20,0:20:60.20:0,60,897
chr10	92515674	.	A	ATGTGTGCATGTGTATG	15108.25	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-10.242;DP=766;FS=6.978;HRun=0;HaplotypeScore=294.3755;InbreedingCoeff=0.9870;MQ=74.19;MQ0=1;MQRankSum=-13.083;QD=70.60;ReadPosRankSum=0.931;VQSLOD=3.5656;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,16:50:51.18:3764,51,0	1/1:0,5:8:9.03:697,9,0	0/0:22,0:22:38.91:0,39,1016	0/0:30,0:32:75.37:0,75,2212	0/0:15,0:15:45.15:0,45,1990	1/1:4,8:18:18.06:1383,18,0	1/1:20,11:51:39.13:2469,39,0	0/0:36,0:35:75.23:0,75,2540	0/0:48,0:48:99:0,132,5314	0/0:34,0:34:87.29:0,87,3430	0/0:12,0:12:24.08:0,24,775	0/0:29,0:29:78.25:0,78,3159	0/0:28,0:28:81.26:0,81,3227	0/0:24,0:24:69.18:0,69,2707	1/1:5,13:33:36.12:2761,36,0	1/1:11,13:33:33.11:2516,33,0	1/1:8,8:21:27.09:1517,27,0	0/0:23,0:23:66.20:0,66,2587	0/0:17,0:17:36.12:0,36,1231	0/0:11,0:11:27.09:0,27,1176	0/0:67,0:66:99:0,178,7325	0/0:14,0:14:39.13:0,39,1601	0/0:16,0:16:45.15:0,45,1827	0/0:34,0:34:96.30:0,96,3828	0/0:19,0:19:54.17:0,54,2272	0/0:30,0:30:78.26:0,78,3325	0/0:27,0:27:69.21:0,69,2596	0/0:14,0:14:39.13:0,39,1708
chr10	92517704	.	CAAAAA	C	936.96	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.367;DP=479;FS=12.839;HRun=16;HaplotypeScore=97.1859;InbreedingCoeff=0.8260;MQ=45.79;MQ0=13;MQRankSum=0.579;QD=17.04;ReadPosRankSum=4.752;VQSLOD=-0.6447;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:34:66.06:0,66,1005	1/1:4,6:9:17.96:262,18,0	0/0:7,0:5:8.52:0,9,191	0/0:2,0:1:3.01:0,3,40	0/0:9,0:9:17.25:0,17,242	0/0:6,0:12:22.01:0,22,107	0/0:9,0:23:43.54:0,44,256	0/0:17,0:19:45.15:0,45,987	0/0:13,0:13:21.83:0,22,275	0/0:15,0:15:30.04:0,30,621	0/0:5,0:5:12:0,12,234	0/0:18,0:19:36.59:0,37,804	0/0:9,0:8:17.93:0,18,276	0/0:20,0:18:45.11:0,45,813	1/1:9,10:20:12.20:299,12,0	0/0:10,0:17:2.63:0,3,198	1/1:6,18:23:32.88:514,33,0	0/0:13,0:11:21.07:0,21,449	0/0:12,0:21:47.35:0,47,693	0/0:17,0:17:35.92:0,36,701	0/0:15,0:12:15.82:0,16,222	0/0:15,0:17:42.14:0,42,827	0/0:12,0:12:18.53:0,19,383	0/0:31,0:30:52.09:0,52,1065	0/0:13,0:13:36.08:0,36,708	0/0:30,0:28:75.41:0,75,1483	0/0:26,0:23:43.04:0,43,678	0/0:15,0:12:18.03:0,18,390
chr10	92517923	.	GACACACACACACACACACAC	G	4142.81	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.656;DP=649;FS=5.517;HRun=0;HaplotypeScore=261.3140;InbreedingCoeff=0.8720;MQ=62.59;MQ0=31;MQRankSum=-4.463;QD=28.77;ReadPosRankSum=0.720;VQSLOD=1.8880;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:39:54.07:0,54,2421	0/0:7,0:11:21.85:0,22,1094	0/0:48,0:18:15.05:0,15,421	0/0:46,0:21:9.03:0,9,321	0/0:4,7:9:0.89:0,1,2	0/0:23,0:22:19.82:0,20,1029	0/0:42,0:42:36.21:0,36,1239	0/0:23,0:23:36.12:0,36,1908	1/1:5,19:22:24.08:1159,24,0	0/0:13,0:14:28.64:0,29,1222	0/0:10,0:10:21.07:0,21,1387	0/0:21,0:20:39.13:0,39,2479	0/0:18,0:18:36.12:0,36,2622	0/0:20,0:17:30.04:0,30,1682	0/0:13,0:21:20.57:0,21,905	0/0:15,0:15:15.52:0,16,1051	0/0:21,0:37:39.58:0,40,2193	0/0:21,0:25:48.14:0,48,2841	1/1:13,3:15:14.99:306,15,0	1/1:6,9:15:12:483,12,0	1/1:20,17:31:2.97:21,3,0	0/0:15,0:15:18.06:0,18,1083	0/0:7,0:10:18.06:0,18,1104	0/0:39,0:40:75.24:0,75,5079	0/0:11,0:12:21.07:0,21,1542	1/1:8,15:22:42.09:1109,42,0	1/1:7,13:21:17.64:904,18,0	1/1:2,6:8:3.01:161,3,0
chr10	92519470	.	TG	T	4774.42	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.130;DP=672;FS=27.151;HRun=7;HaplotypeScore=69.3684;InbreedingCoeff=0.9994;MQ=76.73;MQ0=0;MQRankSum=-2.071;QD=27.92;ReadPosRankSum=3.950;VQSLOD=3.1789;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,38:41:99:1193,117,0	1/1:1,10:11:27.06:275,27,0	0/0:17,0:17:48.13:0,48,577	0/0:12,0:12:24.04:0,24,284	0/0:29,0:29:84.27:0,84,1055	1/1:0,14:14:39.09:398,39,0	1/1:0,15:15:42.10:429,42,0	0/0:30,0:30:72.21:0,72,883	0/0:17,0:17:48.15:0,48,603	0/0:34,0:34:93.29:0,93,1159	0/0:17,0:17:48.15:0,48,603	0/0:25,0:25:72.21:0,72,891	0/0:17,0:17:42.13:0,42,528	0/0:21,0:21:60.19:0,60,752	1/1:0,20:20:57.13:582,57,0	1/1:2,25:27:66.15:673,66,0	1/1:1,42:43:99:1224,120,0	0/0:31,0:31:84.25:0,84,1043	0/0:30,0:30:81.25:0,81,1004	0/0:21,0:21:57.18:0,57,708	0/0:25,0:25:72.18:0,72,865	0/0:21,0:21:60.19:0,60,755	0/0:20,0:20:54.16:0,54,666	0/0:38,0:37:99:0,102,1250	0/0:28,0:28:81.26:0,81,1016	0/0:30,0:30:78.25:0,78,978	0/0:25,0:25:66.21:0,66,830	0/0:13,0:13:36.12:0,36,453
chr10	92520918	.	AGAAG	A	9243.67	PASS	AB=0.892;AC=24;AF=0.429;AN=56;BaseQRankSum=15.088;DP=741;FS=0.320;HRun=0;HaplotypeScore=128.0455;InbreedingCoeff=0.8713;MQ=63.66;MQ0=1;MQRankSum=-1.705;QD=29.34;ReadPosRankSum=2.772;VQSLOD=4.6598;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,138,3030	0/1:7,1:8:22.40:22,0,493	0/1:14,0:15:1.84:2,0,279	0/0:17,0:15:7.49:0,7,309	0/0:37,0:37:99:0,99,2194	0/0:25,0:25:63.13:0,63,1296	0/0:37,0:37:93.24:0,93,2100	1/1:9,23:32:69.02:883,69,0	0/0:34,0:34:87.30:0,87,2106	1/1:4,28:32:84.14:1258,84,0	1/1:4,10:14:27.09:463,27,0	1/1:7,34:41:72.24:1217,72,0	1/1:2,21:23:60.21:1028,60,0	1/1:4,20:24:48.16:823,48,0	0/0:31,0:31:78.24:0,78,1858	0/0:25,0:25:69.22:0,69,1650	0/0:32,0:32:84.14:0,84,1829	1/1:6,17:23:30.10:514,30,0	0/0:24,0:23:63.19:0,63,1480	0/0:22,0:22:60.15:0,60,1401	0/0:25,0:25:66.20:0,66,1478	1/1:4,15:19:42.14:720,42,0	1/1:5,17:22:21.33:361,21,0	1/1:2,25:27:57.20:978,57,0	1/1:7,26:33:57.19:975,57,0	0/0:25,0:25:69.24:0,69,1737	0/0:25,0:25:63.21:0,63,1522	0/0:17,0:17:45.15:0,45,1123
chr10	92523197	.	C	CG	1924.06	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.378;DP=602;FS=0.558;HRun=2;HaplotypeScore=59.8775;InbreedingCoeff=0.9884;MQ=80.29;MQ0=0;MQRankSum=-1.877;QD=36.30;ReadPosRankSum=-0.282;VQSLOD=3.8849;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,129,1656	0/0:15,0:15:39.09:0,39,483	0/0:18,0:18:33.13:0,33,507	0/0:14,0:14:36.30:0,36,376	0/0:15,0:15:45.15:0,45,584	1/1:0,18:18:42.14:629,42,0	1/1:1,15:16:45.15:674,45,0	0/0:22,0:22:60.15:0,60,760	0/0:19,0:19:57.18:0,57,730	0/0:17,0:17:48.16:0,48,623	0/0:15,0:15:42.11:0,42,514	0/0:28,0:28:84.27:0,84,1089	0/0:14,0:14:42.12:0,42,529	0/0:34,0:34:99:0,99,1283	0/0:19,0:19:57.19:0,57,739	1/1:0,19:19:51.17:764,51,0	0/0:36,0:36:99:0,105,1347	0/0:22,0:22:63.19:0,63,799	0/0:18,0:18:54.18:0,54,699	0/0:10,0:10:27.04:0,27,349	0/0:69,0:69:99:0,199,2521	0/0:16,0:16:45.15:0,45,584	0/0:14,0:14:39.13:0,39,506	0/0:31,0:31:90.29:0,90,1168	0/0:11,0:11:33.11:0,33,428	0/0:17,0:17:51.16:0,51,647	0/0:25,0:24:72.23:0,72,934	0/0:4,0:4:12.04:0,12,156
chr10	92523938	.	C	CA	224.53	PASS	AB=1.000;AC=7;AF=0.135;AN=52;BaseQRankSum=-0.100;DP=251;FS=2.669;HRun=0;HaplotypeScore=62.0888;InbreedingCoeff=0.4811;MQ=61.48;MQ0=22;MQRankSum=-1.425;QD=5.91;ReadPosRankSum=0.692;VQSLOD=3.1809;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:22:13.26:0,13,57	1/1:4,0:4:2.73:41,3,0	0/0:15,0:8:17.34:0,17,192	0/0:14,0:9:17.85:0,18,217	./.	0/0:10,0:10:3.48:0,3,32	0/0:17,0:14:18.73:0,19,137	0/0:2,0:2:0:0,0,0	0/0:5,0:4:4.21:0,4,23	./.	0/0:5,0:5:0:0,0,0	0/0:9,0:9:17.79:0,18,155	0/0:8,0:7:12.73:0,13,103	0/0:4,0:4:12.02:0,12,119	1/1:3,2:5:9.03:122,9,0	0/0:4,0:4:3.07:0,3,11	1/1:16,4:19:12.95:174,13,0	0/0:14,0:13:29.88:0,30,272	0/0:7,0:6:14.82:0,15,149	0/0:4,0:3:1.35:0,1,2	0/0:26,0:22:12.13:0,12,111	0/0:3,0:3:9:0,9,91	0/0:4,0:3:3.01:0,3,41	0/0:17,0:17:17.32:0,17,140	0/1:9,0:9:6.96:7,0,66	0/0:9,0:7:10.23:0,10,105	0/0:3,0:2:5.92:0,6,40	0/0:3,0:3:1.92:0,2,39
chr10	92523952	.	TCTCACACACACACACA	T	1925.32	PASS	AB=0.963;AC=27;AF=0.675;AN=40;BaseQRankSum=0.582;DP=221;FS=1.256;HRun=0;HaplotypeScore=58.8229;InbreedingCoeff=0.2303;MQ=38.12;MQ0=26;MQRankSum=1.603;QD=13.10;ReadPosRankSum=3.126;VQSLOD=1.4219;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:19:2.99:0,3,24	./.	0/0:9,0:3:5.97:0,6,45	0/0:8,0:3:3:0,3,28	./.	1/1:10,0:10:2.98:25,3,0	0/1:19,0:15:46.32:46,0,53	./.	1/1:6,0:5:2.12:112,2,0	0/0:5,0:4:0:0,0,0	./.	1/1:5,0:5:8.34:160,8,0	0/1:7,1:7:10.83:232,0,11	1/1:6,0:6:8.69:159,9,0	0/0:6,0:6:8.96:0,9,68	1/1:6,0:6:2.60:10,3,0	0/1:16,0:14:58.93:59,0,253	1/1:11,0:10:10.61:284,11,0	1/1:7,2:8:8.89:255,9,0	./.	1/1:16,0:11:2.74:18,3,0	./.	./.	1/1:7,8:15:5.28:154,5,0	1/1:5,1:6:5.97:144,6,0	1/1:7,2:7:8.35:260,8,0	1/1:2,3:4:3.01:136,3,0	./.
chr10	92523954	.	TCACACACACACACA	T	1515.54	PASS	AB=0.875;AC=21;AF=0.656;AN=32;BaseQRankSum=1.364;DP=224;FS=2.782;HRun=0;HaplotypeScore=56.9466;InbreedingCoeff=0.2043;MQ=36.71;MQ0=27;MQRankSum=-0.517;QD=16.12;ReadPosRankSum=2.775;VQSLOD=1.3899;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	0/0:11,0:11:2.50:0,2,9	0/0:21,0:17:3.48:0,3,71	./.	1/1:6,0:6:2.12:98,2,0	0/0:5,0:4:0:0,0,0	./.	1/1:5,0:5:2.54:110,3,0	1/1:6,0:6:2.82:213,3,0	1/1:5,1:6:3.01:115,3,0	0/0:3,1:5:2.98:0,3,22	./.	0/1:12,0:12:81.02:81,0,124	1/1:10,1:10:4.44:207,4,0	1/1:9,0:8:6.02:222,6,0	./.	0/0:17,0:12:0:0,0,0	./.	./.	1/1:15,0:15:2.86:115,3,0	1/1:6,0:6:3.01:105,3,0	1/1:9,0:7:5.98:232,6,0	1/1:5,0:4:3.01:116,3,0	./.
chr10	92525067	.	A	AGT	4031.87	PASS	AB=0.792;AC=42;AF=0.750;AN=56;BaseQRankSum=2.497;DP=612;FS=44.366;HRun=0;HaplotypeScore=129.0500;InbreedingCoeff=0.4526;MQ=62.55;MQ0=24;MQRankSum=-3.350;QD=7.91;ReadPosRankSum=-3.055;VQSLOD=1.2776;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:2.53:42,3,0	0/0:4,0:4:12.04:0,12,138	0/1:36,0:21:8.49:8,0,182	0/0:37,0:21:12.02:0,12,129	1/1:15,0:13:2.99:23,3,0	0/1:11,12:22:61.78:470,0,62	1/1:22,23:46:60.20:932,60,0	1/1:28,0:27:17.94:150,18,0	1/1:10,0:20:21.01:196,21,0	1/1:13,1:20:23.90:222,24,0	1/1:14,0:17:3:27,3,0	1/1:18,1:29:30:264,30,0	1/1:10,1:16:14.99:129,15,0	1/1:10,0:13:6:52,6,0	0/0:24,0:25:33.10:0,33,381	0/1:7,18:26:9.05:584,0,9	0/0:28,0:29:59.99:0,60,661	1/1:17,0:17:2.98:21,3,0	1/1:15,0:14:17.41:136,17,0	0/1:13,0:14:0:0,0,0	1/1:38,1:45:4.17:47,4,0	1/1:8,0:12:7.82:58,8,0	0/0:3,1:7:1.55:0,2,4	1/1:11,0:17:3.47:27,3,0	1/1:14,1:18:11.84:94,12,0	1/1:16,1:24:49.13:398,49,0	1/1:10,0:13:14.22:113,14,0	1/1:8,0:8:5.80:39,6,0
chr10	92525634	.	T	TTA	557.48	PASS	AB=0.861;AC=11;AF=0.196;AN=56;BaseQRankSum=8.007;DP=405;FS=36.809;HRun=0;HaplotypeScore=73.1598;InbreedingCoeff=-0.2484;MQ=55.00;MQ0=7;MQRankSum=-6.286;QD=3.82;ReadPosRankSum=-0.750;VQSLOD=-0.0423;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,1:17:8.91:0,9,597	0/0:5,0:5:15.05:0,15,244	0/0:18,0:5:15.03:0,15,205	0/0:27,0:16:44.88:0,45,674	0/1:9,3:12:86.60:87,0,361	0/1:8,4:12:99:200,0,309	0/1:20,3:19:84.05:84,0,674	0/0:21,0:21:54.18:0,54,880	0/0:15,0:15:39.13:0,39,636	0/0:12,0:12:36.12:0,36,583	0/1:18,1:19:9.05:9,0,731	0/1:10,2:12:45.70:46,0,406	0/0:12,0:11:33.11:0,33,538	0/0:20,0:20:54.18:0,54,880	0/0:4,0:4:9.03:0,9,147	0/0:11,0:11:30.10:0,30,489	0/0:19,0:19:54.18:0,54,878	0/0:14,0:14:39.13:0,39,636	0/0:15,0:13:33.11:0,33,508	0/1:9,2:11:53.35:53,0,315	0/0:19,0:19:51.17:0,51,827	0/1:9,1:10:31.52:32,0,364	0/1:7,3:10:83.89:84,0,171	0/0:11,0:11:27.09:0,27,440	0/1:9,1:10:19.82:20,0,410	0/0:19,0:19:57.19:0,57,924	0/1:14,1:15:15.61:16,0,639	0/1:10,2:11:74.81:75,0,404
chr10	92525642	.	TTGC	T	377.05	PASS	AB=0.938;AC=3;AF=0.054;AN=56;BaseQRankSum=4.381;DP=367;FS=1.076;HRun=0;HaplotypeScore=74.5610;InbreedingCoeff=0.6059;MQ=54.07;MQ0=4;MQRankSum=-2.438;QD=13.00;ReadPosRankSum=-0.945;VQSLOD=3.2033;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,11:14:30.06:469,30,0	0/0:5,0:5:15.05:0,15,339	0/0:17,0:7:15.05:0,15,284	0/0:24,0:13:30.10:0,30,577	0/0:12,0:11:24.08:0,24,542	0/0:10,0:10:15.05:0,15,340	0/0:19,0:15:33.11:0,33,714	0/0:19,0:19:51.17:0,51,1084	0/1:14,1:15:9.04:9,0,774	0/0:8,0:8:21.07:0,21,476	0/0:18,0:18:48.16:0,48,1082	0/0:11,0:11:19.72:0,20,534	0/0:12,0:11:33.11:0,33,726	0/0:18,0:18:51.18:0,51,1154	0/0:4,0:4:12.04:0,12,267	0/0:13,0:13:33.11:0,33,727	0/0:18,0:18:46.04:0,46,1021	0/0:13,1:14:36.12:0,36,815	0/0:10,0:10:18.06:0,18,408	0/0:9,0:9:16.72:0,17,468	0/0:14,0:14:39.13:0,39,862	0/0:10,0:10:21.07:0,21,473	0/0:6,0:6:12.01:0,12,225	0/0:10,0:10:24.08:0,24,544	0/0:10,0:10:20.76:0,21,474	0/0:18,0:18:51.18:0,51,1140	0/0:17,0:17:45.15:0,45,1014	0/0:12,0:11:27.02:0,27,517
chr10	92526109	.	AAC	A	2335.42	PASS	AB=0.774;AC=33;AF=0.635;AN=52;BaseQRankSum=-1.242;DP=280;FS=6.887;HRun=0;HaplotypeScore=60.9971;InbreedingCoeff=0.4474;MQ=63.35;MQ0=15;MQRankSum=-0.636;QD=12.29;ReadPosRankSum=1.161;VQSLOD=2.6055;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:16,1:16:27.57:28,0,71	0/0:5,0:5:11.14:0,11,102	0/0:36,0:16:27.91:0,28,294	0/1:34,0:11:11.28:11,0,113	1/1:1,8:9:3:26,3,0	0/0:3,0:3:8.70:0,9,102	0/0:7,0:7:15.05:0,15,219	1/1:22,0:21:38.84:432,39,0	1/1:3,5:8:11.62:117,12,0	1/1:2,10:12:30.09:357,30,0	./.	1/1:4,1:4:9.03:107,9,0	1/1:4,2:6:18.05:214,18,0	1/1:2,1:3:3.01:36,3,0	0/0:5,0:5:6.78:0,7,92	0/0:6,0:6:8:0,8,50	0/0:19,0:18:23.10:0,23,276	0/1:2,8:10:6.36:59,0,6	1/1:4,4:7:12.04:141,12,0	0/1:4,1:5:15.92:64,0,16	1/1:15,0:15:19.87:224,20,0	1/1:3,1:4:9.03:108,9,0	./.	1/1:4,2:6:12.04:141,12,0	1/1:1,7:9:6.02:70,6,0	0/1:1,6:7:15.29:163,0,15	1/1:6,0:4:12.04:146,12,0	1/1:4,0:4:6.02:73,6,0
chr10	92526125	.	CAT	C	1402.61	PASS	AB=0.991;AC=38;AF=0.704;AN=54;BaseQRankSum=3.208;DP=326;FS=1.710;HRun=0;HaplotypeScore=73.0728;InbreedingCoeff=0.1737;MQ=47.63;MQ0=24;MQRankSum=0.900;QD=4.75;ReadPosRankSum=-1.473;VQSLOD=2.4422;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:19:3.89:4,0,33	0/0:5,0:5:9.07:0,9,46	0/1:30,0:11:15.65:16,0,85	0/1:29,0:6:18.72:19,0,35	1/1:12,0:12:5.74:37,6,0	0/1:7,0:6:35.12:35,0,39	0/0:7,0:6:14.92:0,15,116	0/1:17,0:15:14.24:83,0,14	1/1:9,0:9:14.76:95,15,0	1/1:11,0:10:28.15:139,28,0	1/1:9,0:9:3:25,3,0	1/1:6,0:5:8.43:41,8,0	1/1:10,0:10:28.91:165,29,0	1/1:4,0:4:5.94:43,6,0	0/0:8,0:8:1.29:0,1,38	0/0:7,0:7:4.70:0,5,21	0/1:23,0:23:5.43:5,0,116	1/1:15,0:15:8.77:104,9,0	0/1:7,0:6:11.66:44,0,12	1/1:9,0:9:17.46:120,17,0	1/1:22,0:19:25.67:145,26,0	1/1:6,0:5:11.51:70,12,0	./.	1/1:8,0:8:14.43:81,14,0	1/1:11,0:11:11.62:78,12,0	0/1:8,0:8:16.17:73,0,16	1/1:11,0:9:14.11:68,14,0	1/1:8,0:8:4.28:77,4,0
chr10	92526127	.	TACACACACACACACAC	T	855.90	PASS	AB=0.713;AC=8;AF=0.160;AN=50;BaseQRankSum=2.753;DP=332;FS=10.007;HRun=0;HaplotypeScore=127.9010;InbreedingCoeff=0.2249;MQ=47.26;MQ0=24;MQRankSum=-2.869;QD=11.57;ReadPosRankSum=3.251;VQSLOD=1.9559;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,7:19:3.01:63,3,0	1/1:2,3:5:6.02:254,6,0	./.	./.	0/0:12,0:12:3.01:0,3,66	0/1:7,0:6:17.34:17,0,123	0/0:8,0:7:14.98:0,15,211	0/0:17,0:15:11.97:0,12,168	0/0:8,0:10:14.52:0,15,193	0/0:9,0:10:14.63:0,15,237	0/0:10,0:10:3.48:0,3,63	0/0:5,0:5:5.75:0,6,48	0/0:9,0:10:20.59:0,21,387	0/0:4,0:5:3.43:0,3,19	0/1:5,5:10:4.71:255,0,5	0/1:1,0:7:37.55:54,0,38	0/1:11,13:23:9.34:338,0,9	0/0:14,0:15:26.19:0,26,417	0/0:6,0:7:14.63:0,15,133	0/0:9,0:9:15.05:0,15,260	0/0:22,0:19:12.04:0,12,220	0/0:6,0:5:11.63:0,12,202	./.	0/0:7,0:8:11.62:0,12,176	0/0:11,0:11:12.04:0,12,219	0/0:10,0:10:5.66:0,6,192	0/0:12,0:10:20.59:0,21,411	0/0:9,0:9:12.04:0,12,306
chr10	92526856	.	GTA	G	2850.17	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=13.565;DP=860;FS=4.528;HRun=0;HaplotypeScore=142.2140;InbreedingCoeff=-0.3931;MQ=55.57;MQ0=17;MQRankSum=4.376;QD=4.04;ReadPosRankSum=6.340;VQSLOD=2.3117;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:29.20:0,29,259	1/1:0,13:13:23.99:305,24,0	0/0:29,0:15:41.96:0,42,416	0/0:35,0:17:32.05:0,32,332	0/1:33,0:33:61.60:62,0,104	0/1:18,0:17:43.82:44,0,66	0/0:36,0:36:6.46:0,6,255	0/1:32,0:30:35.31:35,0,304	0/1:27,0:27:80.37:80,0,94	0/1:39,0:39:47.77:48,0,387	0/1:30,0:30:39.20:39,0,89	0/1:37,0:37:92:92,0,109	0/1:21,0:21:74.70:79,0,75	0/1:37,0:36:71.97:72,0,157	1/1:4,27:30:39.12:518,39,0	0/1:20,0:20:28.44:28,0,109	1/1:5,36:42:49.41:719,49,0	0/1:34,0:33:84.98:85,0,144	0/0:21,0:21:4.60:0,5,254	0/1:28,0:28:20.78:72,0,21	0/1:71,0:69:99:160,0,248	0/1:28,0:27:87.07:87,0,95	0/1:24,0:23:72.73:73,0,77	0/1:43,0:43:99:134,0,125	0/1:28,0:28:47.79:48,0,88	0/1:30,0:30:89.05:89,0,122	1/1:27,0:27:12.12:118,12,0	0/1:13,0:12:29.67:35,0,30
chr10	92526862	.	ATG	A	9200.23	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=-0.312;DP=840;FS=5.693;HRun=0;HaplotypeScore=120.2830;InbreedingCoeff=0.5594;MQ=56.27;MQ0=20;MQRankSum=4.860;QD=12.27;ReadPosRankSum=3.833;VQSLOD=4.5094;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:28:6.38:0,6,43	1/1:13,0:13:20.32:113,20,0	0/0:28,0:15:5.05:0,5,71	0/0:33,0:18:4:0,4,99	1/1:10,20:31:32.93:366,33,0	1/1:4,13:16:21.95:248,22,0	1/1:12,22:36:14.88:155,15,0	1/1:17,15:29:40.30:431,40,0	1/1:7,19:26:15.74:364,16,0	1/1:16,21:37:14.25:555,14,0	1/1:12,20:32:21.03:246,21,0	1/1:10,26:37:44.02:503,44,0	1/1:5,16:21:33.10:387,33,0	1/1:11,23:33:35.68:398,36,0	0/1:31,0:30:25.98:173,0,26	1/1:6,16:22:18.05:211,18,0	0/1:42,0:42:6.01:242,0,6	1/1:13,22:34:7.61:384,8,0	1/1:12,6:19:20.38:197,20,0	1/1:4,24:29:29.92:330,30,0	1/1:20,48:66:36.55:773,37,0	1/1:8,20:27:39.11:457,39,0	1/1:11,16:26:30.09:350,30,0	1/1:6,34:42:62.85:696,63,0	1/1:6,21:27:24.07:281,24,0	1/1:7,23:30:66.04:693,66,0	1/1:3,19:22:42:473,42,0	1/1:3,8:10:15.04:175,15,0
chr10	92526886	.	GTA	G	2148.97	PASS	AB=0.995;AC=24;AF=0.429;AN=56;BaseQRankSum=9.760;DP=862;FS=29.213;HRun=0;HaplotypeScore=147.7040;InbreedingCoeff=-0.6377;MQ=60.11;MQ0=21;MQRankSum=0.161;QD=3.03;ReadPosRankSum=12.372;VQSLOD=0.0926;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:39:11.41:11,0,184	0/0:14,0:14:28.87:0,29,146	0/0:35,0:19:30.47:0,30,315	0/0:32,0:19:36.05:0,36,342	0/1:31,0:31:74.27:74,0,132	0/1:18,0:17:64.45:66,0,64	0/1:35,0:35:26.59:27,0,177	0/1:34,0:31:53.13:53,0,291	0/1:25,2:27:98.43:119,0,98	0/1:30,0:30:99:132,0,119	0/1:30,0:29:43.79:44,0,103	0/1:38,0:38:89.33:157,0,89	0/1:28,0:28:78.87:79,0,215	0/1:38,0:37:99:165,0,200	0/0:29,0:28:51.14:0,51,341	0/1:23,0:23:40.40:40,0,136	0/0:41,1:42:3.35:0,3,340	0/1:34,0:33:99:141,0,116	0/1:15,0:14:84.29:88,0,84	0/1:30,0:30:25.66:89,0,26	0/1:69,0:67:99:189,0,175	0/1:26,0:25:44.80:91,0,45	1/1:20,0:19:5.18:107,5,0	0/1:52,0:52:99:126,0,235	0/1:26,0:26:20.45:56,0,20	0/1:30,0:30:99:236,0,103	0/1:23,1:24:25.44:182,0,25	0/1:12,0:12:35.23:35,0,63
chr10	92530605	.	CAA	C	200.53	PASS	AB=0.906;AC=4;AF=0.071;AN=56;BaseQRankSum=-4.434;DP=668;FS=3.923;HRun=16;HaplotypeScore=120.1920;InbreedingCoeff=-0.0197;MQ=47.58;MQ0=41;MQRankSum=2.217;QD=1.89;ReadPosRankSum=2.114;VQSLOD=-0.0170;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,22:36:10.55:274,0,11	0/0:13,0:13:20.96:0,21,185	0/0:89,0:20:21.40:0,21,190	0/0:102,1:20:3.21:0,3,126	0/0:20,0:21:38.84:0,39,306	0/1:24,0:21:5.02:5,0,110	0/1:20,0:20:0.99:1,0,98	0/1:24,0:23:2.96:3,0,24	0/0:10,0:10:23.99:0,24,211	0/0:27,0:27:41.79:0,42,352	0/0:15,0:15:29.65:0,30,221	0/0:18,0:18:26.62:0,27,241	0/0:6,0:6:11.99:0,12,101	0/0:18,0:18:33.01:0,33,294	0/0:13,0:13:21.01:0,21,191	0/0:19,0:19:18.06:0,18,306	0/0:19,0:19:26.25:0,26,211	0/0:19,0:19:21.04:0,21,153	0/0:19,0:19:28.87:0,29,240	0/0:12,0:12:28.79:0,29,235	0/0:12,0:12:11.77:0,12,78	0/0:22,0:21:38.76:0,39,350	0/0:10,0:10:19.55:0,20,147	0/0:13,0:13:23.43:0,23,201	0/0:19,0:17:26.98:0,27,234	0/0:27,0:25:44.93:0,45,389	0/0:19,0:19:26.76:0,27,228	0/0:13,0:13:15.01:0,15,142
chr10	92530617	.	A	AC	608.54	PASS	AB=0.983;AC=10;AF=0.179;AN=56;BaseQRankSum=-4.601;DP=654;FS=0.473;HRun=0;HaplotypeScore=115.6516;InbreedingCoeff=-0.0460;MQ=51.51;MQ0=38;MQRankSum=4.612;QD=3.06;ReadPosRankSum=-5.429;VQSLOD=1.5053;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:67.74:0,68,490	0/0:10,0:10:21.85:0,22,110	0/0:77,0:21:13.36:0,13,193	0/0:87,1:17:34.12:0,34,293	0/1:27,0:27:48.18:48,0,132	0/0:22,0:19:37.73:0,38,333	0/0:19,0:19:46.80:0,47,417	1/1:2,21:23:53.44:437,53,0	0/0:15,0:16:4.33:0,4,46	0/1:29,0:30:73.19:73,0,215	0/1:15,0:15:33.74:34,0,126	0/0:19,0:20:6.96:0,7,55	0/0:8,0:8:4.33:0,4,34	0/0:20,0:20:17.70:0,18,89	0/0:15,0:15:25.92:0,26,161	0/0:18,0:18:24.98:0,25,368	0/0:17,0:17:26.07:0,26,140	0/0:18,0:18:6.36:0,6,96	0/1:19,0:19:25.36:25,0,152	0/1:14,0:15:24.54:25,0,56	0/0:10,0:10:17.45:0,17,99	0/1:21,0:21:40.27:40,0,136	0/0:13,0:13:2.83:0,3,26	0/0:13,0:13:11.67:0,12,43	0/0:23,0:21:4.04:0,4,71	0/1:29,0:26:58.34:58,0,110	0/1:18,0:18:14.56:15,0,35	0/0:13,0:13:16.05:0,16,113
chr10	92530618	.	A	AAAACCC	7305.72	PASS	AB=0.586;AC=41;AF=0.732;AN=56;BaseQRankSum=-7.312;DP=666;FS=16.656;HRun=0;HaplotypeScore=145.3752;InbreedingCoeff=0.6664;MQ=52.46;MQ0=35;MQRankSum=0.557;QD=17.31;ReadPosRankSum=3.434;VQSLOD=3.2249;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:57.09:0,57,877	1/1:3,7:10:21.06:591,21,0	0/0:73,0:21:20.03:0,20,328	0/0:79,0:17:36:0,36,509	1/1:4,0:28:18.17:451,18,0	0/0:22,0:19:38.72:0,39,444	0/0:17,0:17:42.22:0,42,576	1/1:20,0:19:16.29:158,16,0	1/1:4,0:17:16.33:193,16,0	0/1:12,0:31:3.91:475,0,4	1/1:6,0:17:5.09:237,5,0	1/1:6,0:24:23.99:302,24,0	1/1:2,0:9:8.79:79,9,0	1/1:2,0:19:28.64:383,29,0	1/1:5,10:17:17.87:564,18,0	0/0:18,0:18:51.13:0,51,713	1/1:9,11:24:36.12:866,36,0	1/1:7,0:18:1.45:160,1,0	0/1:6,0:23:2.14:364,0,2	1/1:4,0:16:40.66:367,41,0	1/1:6,0:11:1.22:30,1,0	0/1:5,0:21:15.67:335,0,16	1/1:0,0:14:17.89:203,18,0	1/1:1,0:14:24.44:277,24,0	1/1:7,0:22:27.04:296,27,0	1/1:10,0:28:14.23:500,14,0	1/1:2,0:20:27.07:350,27,0	1/1:3,0:13:9.03:124,9,0
chr10	92530620	.	AAC	A	681.81	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-5.461;DP=631;FS=0.000;HRun=0;HaplotypeScore=121.4749;InbreedingCoeff=0.7569;MQ=54.68;MQ0=30;MQRankSum=0.732;QD=7.41;ReadPosRankSum=-3.208;VQSLOD=2.8426;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:32:14.47:14,0,132	0/0:9,0:9:20.83:0,21,168	0/0:66,0:23:14.34:0,14,266	0/0:70,0:17:34.86:0,35,306	0/0:25,0:25:40.93:0,41,469	1/1:18,5:21:24.66:297,25,0	1/1:17,0:17:23.60:308,24,0	0/0:20,0:19:46.48:0,46,318	0/0:18,0:18:26.93:0,27,241	0/0:28,0:28:68.62:0,69,584	0/0:14,0:14:24.52:0,25,198	0/0:22,0:22:38.68:0,39,331	0/0:9,0:9:8.79:0,9,85	0/0:18,0:18:32.89:0,33,284	0/0:14,0:14:20.86:0,21,165	1/1:19,0:19:7.05:204,7,0	0/0:22,0:23:25.80:0,26,223	0/0:20,1:21:18.44:0,18,149	0/0:22,0:22:28.91:0,29,378	0/0:14,0:14:31.67:0,32,317	0/0:12,0:12:8.77:0,9,89	0/0:21,0:20:53.47:0,53,455	0/0:14,0:14:23.30:0,23,169	0/0:15,0:15:29.35:0,29,262	0/0:23,0:21:26.70:0,27,234	0/0:29,0:26:69.55:0,70,594	0/0:18,0:18:27.01:0,27,242	0/0:12,0:12:11.82:0,12,100
chr10	92530621	.	AC	A	914.28	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-4.339;DP=620;FS=1.094;HRun=1;HaplotypeScore=113.5616;InbreedingCoeff=0.9148;MQ=54.83;MQ0=27;MQRankSum=-1.562;QD=15.50;ReadPosRankSum=-3.071;VQSLOD=2.6539;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:15.11:0,15,236	0/0:8,0:9:19.57:0,20,94	0/0:58,5:22:13.58:0,14,209	0/0:60,8:17:23.35:0,23,224	0/0:25,0:25:40.18:0,40,387	1/1:22,1:21:41.21:323,41,0	1/1:15,2:17:43.46:366,43,0	0/0:19,1:19:44.28:0,44,258	0/0:17,0:18:29.75:0,30,219	0/0:25,0:26:63.45:0,63,496	0/0:12,0:13:17.56:0,18,147	0/0:21,0:22:31.83:0,32,245	0/0:8,0:8:6.46:0,6,50	0/0:17,0:18:35.02:0,35,230	0/0:14,0:14:18.03:0,18,95	1/1:15,4:19:46.47:367,46,0	0/0:21,0:23:23.57:0,24,163	0/0:20,0:20:14.94:0,15,113	0/0:22,0:22:24.71:0,25,343	0/0:13,0:14:22.26:0,22,241	0/0:11,0:12:11.68:0,12,95	0/0:22,0:21:54.91:0,55,390	0/0:14,0:14:28:0,28,161	0/0:15,0:16:31.85:0,32,229	0/0:22,0:21:22.22:0,22,164	0/0:29,0:27:63.97:0,64,479	0/0:16,0:17:26.35:0,26,161	0/0:11,0:11:11.70:0,12,74
chr10	92531659	.	T	TG	4041.19	PASS	AB=0.764;AC=32;AF=0.571;AN=56;BaseQRankSum=5.372;DP=541;FS=22.572;HRun=10;HaplotypeScore=79.8520;InbreedingCoeff=0.5500;MQ=79.66;MQ0=0;MQRankSum=-0.726;QD=10.75;ReadPosRankSum=2.790;VQSLOD=1.1700;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:21:5.88:36,6,0	0/1:3,5:8:15.85:25,0,16	0/1:21,0:19:34.45:34,0,121	0/1:20,0:19:1.67:2,0,101	1/1:27,0:27:70.46:428,70,0	1/1:8,11:19:30.06:312,30,0	0/1:6,19:25:29.47:452,0,29	0/1:16,5:21:36.60:113,0,37	1/1:16,0:16:35.19:210,35,0	0/0:22,0:21:47.88:0,48,386	0/0:16,1:17:23.96:0,24,197	0/0:15,0:15:23.93:0,24,197	1/1:4,7:12:5.07:90,5,0	0/0:13,0:13:31.94:0,32,243	1/1:5,8:12:9.02:96,9,0	0/1:4,8:13:9.59:113,0,10	1/1:13,13:26:21.52:225,22,0	0/0:14,1:15:6.87:0,7,251	1/1:16,0:16:37.11:192,37,0	1/1:14,0:14:35.18:214,35,0	1/1:40,0:40:84.77:502,85,0	0/0:22,0:22:44.92:0,45,366	0/0:16,0:16:26.58:0,27,204	0/0:28,0:28:53.89:0,54,443	0/0:17,0:17:35.92:0,36,293	1/1:23,0:22:36.13:295,36,0	1/1:24,0:24:62.01:421,62,0	1/1:17,0:17:46.94:281,47,0
chr10	92531664	.	G	GA	6300.27	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=-5.082;DP=511;FS=26.462;HRun=0;HaplotypeScore=59.9676;InbreedingCoeff=0.5840;MQ=78.02;MQ0=0;MQRankSum=-2.153;QD=22.74;ReadPosRankSum=8.367;VQSLOD=3.1366;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:17.87:0,18,133	0/0:7,0:7:9.60:0,10,77	0/0:19,0:17:25.48:0,25,376	0/0:17,1:17:17.74:0,18,313	1/1:0,27:27:78.12:1031,78,0	0/1:18,0:18:14.71:15,0,99	0/1:27,0:27:39.92:40,0,187	0/0:20,0:20:30.62:0,31,358	1/1:0,14:14:36.12:502,36,0	0/0:21,0:21:60.14:0,60,768	0/0:12,0:12:30.07:0,30,384	0/0:14,0:14:36.08:0,36,426	0/1:11,0:11:15.88:16,0,78	0/0:13,0:13:39.08:0,39,477	0/1:14,0:13:1.43:1,0,104	0/1:11,0:11:14.71:15,0,67	0/1:20,0:20:8.41:8,0,100	0/0:17,0:17:35.62:0,36,541	1/1:0,17:18:54.05:647,54,0	1/1:0,13:14:39.03:502,39,0	1/1:0,38:38:87.29:1211,87,0	0/0:19,0:19:57.12:0,57,727	0/0:15,0:15:37.33:0,37,447	0/0:26,0:26:75.18:0,75,935	0/0:16,0:16:48.12:0,48,607	1/1:1,21:21:21.73:775,22,0	1/1:0,26:26:62.86:868,63,0	1/1:0,17:17:48.16:669,48,0
chr10	92531779	.	A	AT	5091.03	PASS	AB=0.721;AC=33;AF=0.589;AN=56;BaseQRankSum=-4.209;DP=472;FS=10.016;HRun=11;HaplotypeScore=98.3292;InbreedingCoeff=0.7916;MQ=67.97;MQ0=1;MQRankSum=-2.847;QD=18.38;ReadPosRankSum=-0.760;VQSLOD=4.5568;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:20:34.88:0,35,261	1/1:3,0:9:22.88:126,23,0	0/0:19,0:16:19.67:0,20,132	0/1:11,1:11:8.23:24,0,8	0/0:11,0:19:26.66:0,27,78	1/1:9,15:24:30.83:480,31,0	1/1:7,15:22:54.02:521,54,0	1/1:12,26:38:87.13:860,87,0	0/0:4,0:13:19.88:0,20,57	1/1:7,10:18:32.90:319,33,0	1/1:7,15:22:21.87:396,22,0	1/1:3,4:7:12.02:122,12,0	1/1:2,10:12:33.04:326,33,0	1/1:2,6:9:20.88:197,21,0	1/1:5,0:14:31.25:158,31,0	1/1:2,8:10:24.05:243,24,0	1/1:4,0:11:25.95:148,26,0	1/1:1,13:14:39.06:389,39,0	0/0:6,0:26:40.73:0,41,118	0/0:8,0:26:41.70:0,42,127	0/0:3,0:10:14.73:0,15,42	0/1:3,5:8:8.21:107,0,8	1/1:10,8:18:24.05:243,24,0	0/1:2,3:5:11.21:79,0,11	1/1:11,10:23:39.18:354,39,0	0/0:3,0:24:40.73:0,41,118	0/0:1,0:22:44.82:0,45,130	0/0:1,0:15:28.51:0,29,82
chr10	92531816	.	G	GATCTATCATCTATCTATCT	18834.40	PASS	AB=0.997;AC=40;AF=0.714;AN=56;BaseQRankSum=0.684;DP=495;FS=6.485;HRun=0;HaplotypeScore=252.9684;InbreedingCoeff=-0.0840;MQ=54.24;MQ0=9;MQRankSum=-8.896;QD=41.49;ReadPosRankSum=1.871;VQSLOD=2.9382;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:99:630,0,160	1/1:5,0:9:11.40:68,11,0	0/0:26,0:16:39.11:0,39,600	0/0:14,0:9:15.05:0,15,345	0/1:16,0:16:99:154,0,125	0/1:13,0:13:54.93:55,0,313	0/1:18,0:18:76.58:77,0,414	1/1:35,0:30:6.81:1726,7,0	0/1:9,0:9:99:400,0,181	1/1:6,7:13:30.10:1672,30,0	1/1:17,7:25:20.80:1621,21,0	1/1:6,0:13:15.05:837,15,0	1/1:10,4:15:24.08:894,24,0	1/1:5,5:10:15.05:1128,15,0	1/1:10,0:17:14.09:67,14,0	0/1:13,0:13:17.78:18,0,427	1/1:8,0:12:20.89:339,21,0	1/1:16,0:15:39.13:1440,39,0	0/1:23,0:23:99:218,0,309	0/1:33,0:32:99:1027,0,240	0/1:12,0:11:99:344,0,144	1/1:8,3:12:6.02:543,6,0	1/1:8,10:19:21.07:1900,21,0	1/1:5,2:7:9.50:738,10,0	1/1:17,0:21:24.08:1754,24,0	0/1:21,0:21:99:189,0,416	0/1:24,0:24:99:401,0,286	0/1:18,0:17:99:593,0,238
chr10	92531820	.	T	TATC	5776.29	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=4.413;DP=497;FS=4.259;HRun=0;HaplotypeScore=188.6915;InbreedingCoeff=0.4283;MQ=50.48;MQ0=9;MQRankSum=-5.456;QD=16.74;ReadPosRankSum=4.252;VQSLOD=4.5489;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:24:61.43:61,0,112	0/1:9,0:9:9.85:155,0,10	0/0:26,0:15:39.11:0,39,567	0/0:13,0:7:15.05:0,15,238	0/0:16,0:16:11.83:0,12,150	1/1:4,10:16:27.09:558,27,0	1/1:10,11:21:36.12:752,36,0	0/1:36,0:31:99:758,0,156	0/1:9,0:9:0.93:1,0,184	1/1:12,0:11:18.76:296,19,0	0/1:28,0:27:1.01:235,0,1	1/1:13,0:13:15.02:213,15,0	1/1:14,0:14:24.08:402,24,0	0/1:10,0:10:27.79:200,0,28	1/1:17,0:16:15.05:221,15,0	1/1:4,8:12:24.08:516,24,0	1/1:12,0:12:11.62:247,12,0	1/1:16,0:15:10.58:419,11,0	0/0:20,0:20:40.07:0,40,632	0/1:36,0:34:11.91:12,0,268	0/0:13,0:12:18.02:0,18,224	1/1:11,0:10:6.02:88,6,0	0/1:19,0:19:21.78:286,0,22	1/1:6,0:6:5.62:60,6,0	1/1:21,0:21:23.41:294,23,0	0/0:21,0:21:44.29:0,44,710	0/0:24,0:24:28.61:0,29,618	0/0:19,0:18:7.17:0,7,331
chr10	92531823	.	CT	C	1154.96	PASS	AB=0.811;AC=14;AF=0.250;AN=56;BaseQRankSum=-0.944;DP=488;FS=3.003;HRun=1;HaplotypeScore=159.3406;InbreedingCoeff=-0.0699;MQ=49.77;MQ0=9;MQRankSum=-1.675;QD=5.00;ReadPosRankSum=-1.712;VQSLOD=-0.1239;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,1:24:19.45:19,0,238	0/0:6,3:9:10.12:0,10,73	0/0:25,0:14:39.11:0,39,564	0/0:13,0:6:15.05:0,15,236	0/0:16,0:16:12.04:0,12,185	0/1:13,4:17:58.40:60,0,58	0/1:15,7:21:55.31:55,0,87	0/1:18,15:28:99:414,0,618	0/0:9,0:9:21.07:0,21,310	0/1:9,1:9:69.75:70,0,136	0/1:19,9:27:9.49:9,0,93	0/1:11,2:13:2.42:73,0,2	1/1:6,8:14:11.44:213,11,0	0/1:9,1:10:26.31:26,0,65	0/0:10,6:15:11.86:0,12,41	0/1:8,3:11:21.33:26,0,21	0/1:9,3:12:5.67:73,0,6	0/1:9,6:14:99:238,0,155	0/0:18,0:18:54.16:0,54,777	0/0:36,0:34:26.12:0,26,376	0/0:13,0:12:15.52:0,16,234	0/0:8,3:10:2.63:0,3,14	0/0:15,5:20:18.22:0,18,99	0/0:6,1:7:5.09:0,5,52	0/1:15,6:20:5.40:34,0,5	0/0:21,0:21:60.16:0,60,892	0/0:24,0:24:51.17:0,51,785	0/0:19,0:18:35.91:0,36,519
chr10	92531847	.	C	CTATCTATCTATCTATCTATCT	21928.98	PASS	AB=0.882;AC=30;AF=0.536;AN=56;BaseQRankSum=0.045;DP=530;FS=5.296;HRun=0;HaplotypeScore=260.7039;InbreedingCoeff=0.1079;MQ=52.41;MQ0=8;MQRankSum=-5.661;QD=55.24;ReadPosRankSum=1.484;VQSLOD=3.9464;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:22:30.05:1074,30,0	0/1:6,0:8:17.92:18,0,162	0/0:30,0:12:27:0,27,442	0/0:28,0:12:14.33:0,14,286	1/1:0,9:23:3.01:266,3,0	0/0:18,0:18:30.10:0,30,798	0/0:21,0:20:51.05:0,51,1176	0/1:38,0:40:99:649,0,979	1/1:1,4:11:12.03:813,12,0	0/1:8,0:7:99:358,0,147	0/1:22,0:24:99:707,0,378	0/1:12,0:13:99:494,0,108	0/1:7,0:10:65.69:471,0,66	0/1:9,0:9:99:730,0,105	0/0:12,0:11:18.06:0,18,264	0/0:12,0:12:27.09:0,27,918	0/0:11,0:11:20.27:0,20,209	0/1:12,0:17:99:691,0,297	1/1:1,7:19:49.41:2919,49,0	1/1:0,0:35:52.96:3128,53,0	1/1:1,0:15:30.07:1197,30,0	0/1:9,0:9:71.83:364,0,72	0/1:19,0:23:99:1269,0,288	0/1:10,0:11:99:170,0,191	0/1:17,0:18:99:418,0,189	1/1:0,7:24:69.20:3053,69,0	1/1:0,6:28:29.89:1839,30,0	1/1:1,0:14:27.09:1300,27,0
chr10	92532065	.	CACACACACACACACACAGAG	C	864.22	PASS	AB=0.990;AC=9;AF=0.161;AN=56;BaseQRankSum=2.746;DP=538;FS=2.159;HRun=0;HaplotypeScore=188.5139;InbreedingCoeff=0.3523;MQ=51.32;MQ0=24;MQRankSum=-1.571;QD=7.39;ReadPosRankSum=-0.935;VQSLOD=2.5489;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,1:34:96.99:279,0,97	0/1:12,0:12:20.90:21,0,192	0/0:49,0:16:47.90:0,48,803	0/0:46,0:11:30.57:0,31,655	0/0:23,0:22:28.06:0,28,2011	1/1:4,16:20:3.01:169,3,0	1/1:5,15:20:6.02:339,6,0	0/0:15,0:13:26.33:0,26,786	0/0:14,0:13:33.56:0,34,1992	0/0:13,0:12:28.45:0,28,1085	0/0:18,0:18:27.55:0,28,964	0/0:20,0:19:30.10:0,30,1352	0/0:15,0:15:15.26:0,15,552	0/0:12,0:11:6.13:0,6,503	0/1:17,0:17:16.61:21,0,17	1/1:1,13:13:1.84:167,2,0	0/0:20,0:20:20.13:0,20,297	0/0:14,0:14:10.34:0,10,562	0/0:12,0:9:22.32:0,22,1253	0/0:16,0:15:30.10:0,30,1718	0/0:23,0:20:26.51:0,27,1905	0/0:18,0:17:24.07:0,24,1126	0/0:18,0:18:8.66:0,9,373	0/0:28,0:28:24.08:0,24,1285	0/0:12,0:12:1.35:0,1,408	0/0:14,0:13:33.11:0,33,1700	0/0:13,0:13:8.76:0,9,1470	0/0:7,0:7:12.43:0,12,678
chr10	92532067	.	CACACACACACACACAGAG	C	847.38	PASS	AB=0.853;AC=11;AF=0.196;AN=56;BaseQRankSum=4.564;DP=532;FS=7.066;HRun=0;HaplotypeScore=176.0069;InbreedingCoeff=0.4086;MQ=51.76;MQ0=24;MQRankSum=-1.956;QD=6.78;ReadPosRankSum=1.930;VQSLOD=1.6277;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,26:33:75.72:269,0,76	0/1:11,0:11:20.80:21,0,114	0/0:50,0:18:47.76:0,48,776	0/0:46,0:11:30.57:0,31,546	0/0:24,0:23:28.03:0,28,1691	1/1:16,0:16:3.01:136,3,0	1/1:15,0:15:6.02:272,6,0	0/0:18,0:16:9.89:0,10,561	0/0:14,0:13:30.09:0,30,1718	0/0:13,0:12:28.40:0,28,889	0/0:17,0:17:25.30:0,25,729	0/0:21,0:20:30.56:0,31,1070	0/0:16,0:16:12.47:0,12,438	0/0:11,0:10:5.61:0,6,399	1/1:17,0:17:11.78:108,12,0	1/1:14,0:13:1.69:134,2,0	0/1:19,0:19:51.73:52,0,103	0/0:14,0:14:6.89:0,7,442	0/0:14,0:11:26.18:0,26,1098	0/0:16,0:15:30.09:0,30,1441	0/0:23,0:20:26.46:0,26,1646	0/0:17,0:16:21.07:0,21,933	0/0:18,0:18:5.67:0,6,297	0/0:28,0:28:24.08:0,24,1070	0/0:12,0:12:1.62:0,2,333	0/0:14,0:13:26.91:0,27,1401	0/0:13,0:13:8.60:0,9,1210	0/0:8,0:8:11.94:0,12,562
chr10	92532073	.	CACACACACAGAG	C	1402.10	PASS	AB=0.891;AC=16;AF=0.286;AN=56;BaseQRankSum=3.811;DP=521;FS=0.732;HRun=0;HaplotypeScore=141.2053;InbreedingCoeff=0.4493;MQ=54.68;MQ0=21;MQRankSum=-3.374;QD=8.76;ReadPosRankSum=1.842;VQSLOD=2.6702;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:6.02:175,6,0	1/1:1,10:11:11.82:112,12,0	0/0:45,0:17:50.75:0,51,800	0/0:44,0:11:29.73:0,30,452	0/0:26,0:25:18.05:0,18,759	1/1:16,0:16:3.01:94,3,0	1/1:15,0:15:6.02:189,6,0	0/1:17,0:15:3.14:3,0,111	0/0:14,0:13:23.60:0,24,981	0/0:14,0:13:3.23:0,3,344	0/0:16,0:16:10.20:0,10,201	0/0:19,0:18:21.52:0,22,399	0/0:15,0:15:9.38:0,9,180	0/1:11,0:10:10.82:11,0,165	1/1:1,15:16:11.71:436,12,0	1/1:14,0:13:1.98:93,2,0	0/1:4,14:18:6.35:446,0,6	0/0:14,0:14:3.60:0,4,192	0/0:19,0:16:25.85:0,26,534	0/0:16,0:15:24.52:0,25,718	0/0:24,0:21:16.08:0,16,927	0/0:15,0:15:15.05:0,15,363	0/0:17,0:17:5.61:0,6,140	0/0:26,0:26:21.05:0,21,473	0/1:13,0:13:2:2,0,115	0/0:15,0:14:2.49:0,2,637	0/0:13,0:13:2.38:0,2,575	0/0:9,0:9:5.40:0,5,269
chr10	92532079	.	CACAG	C	3653.45	PASS	AB=0.929;AC=45;AF=0.804;AN=56;BaseQRankSum=-1.113;DP=508;FS=0.000;HRun=0;HaplotypeScore=90.7459;InbreedingCoeff=0.0842;MQ=55.89;MQ0=20;MQRankSum=0.156;QD=8.74;ReadPosRankSum=2.963;VQSLOD=1.5777;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:5.96:48,6,0	1/1:11,0:11:2.61:16,3,0	0/0:45,0:17:44.05:0,44,425	0/0:45,0:12:29.92:0,30,264	0/1:23,0:23:61.93:184,0,62	1/1:16,0:16:3:29,3,0	1/1:15,0:15:6.01:57,6,0	1/1:16,0:14:34.18:297,34,0	0/1:14,0:13:82.88:83,0,179	1/1:13,0:13:29.82:302,30,0	1/1:15,0:15:18.44:159,18,0	1/1:3,16:18:14.76:212,15,0	1/1:2,13:15:5.82:104,6,0	1/1:12,0:11:23.93:190,24,0	1/1:16,0:16:11.86:114,12,0	1/1:14,0:13:2.40:28,2,0	1/1:16,0:16:14.91:123,15,0	1/1:12,0:12:33.06:217,33,0	1/1:19,0:16:33.48:291,33,0	0/1:15,0:14:6.97:88,0,7	0/1:24,0:21:99:158,0,99	1/1:2,11:13:6.02:117,6,0	1/1:3,15:18:3.01:58,3,0	0/1:4,20:24:10.83:109,0,11	1/1:11,0:12:15:160,15,0	0/1:16,0:15:17.76:183,0,18	1/1:11,1:12:5.52:187,6,0	0/1:10,0:10:17.71:141,0,18
chr10	92532081	.	CAG	C	3777.83	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-0.435;DP=498;FS=0.723;HRun=0;HaplotypeScore=80.3453;InbreedingCoeff=0.4628;MQ=55.86;MQ0=20;MQRankSum=-0.062;QD=9.26;ReadPosRankSum=1.701;VQSLOD=3.3307;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:5.78:32,6,0	1/1:11,0:11:2.77:16,3,0	0/0:45,0:17:44.05:0,44,425	0/0:45,0:12:30.39:0,30,264	1/1:23,1:23:32.97:294,33,0	1/1:16,0:16:2.88:15,3,0	1/1:15,0:15:5.72:29,6,0	1/1:16,0:14:38.93:329,39,0	0/1:14,0:13:44.35:141,0,44	1/1:10,0:12:32.78:263,33,0	1/1:14,0:14:17.96:144,18,0	1/1:19,0:18:14.75:116,15,0	1/1:14,0:15:5.76:44,6,0	1/1:11,0:10:23.93:190,24,0	1/1:16,0:16:11.50:59,12,0	1/1:14,0:13:2.74:14,3,0	1/1:15,0:16:13.40:68,13,0	1/1:13,0:13:35.57:237,36,0	1/1:19,0:17:40.75:333,41,0	1/1:13,1:13:23.20:198,23,0	1/1:22,0:19:31.94:259,32,0	1/1:11,0:11:6:53,6,0	1/1:17,0:18:3:26,3,0	1/1:21,1:23:9.01:97,9,0	1/1:11,0:11:14.95:127,15,0	1/1:3,11:13:29.95:259,30,0	1/1:11,1:12:29.96:262,30,0	1/1:10,0:10:10.87:171,11,0
chr10	92533290	.	TGTGTGTGTGTGTGTGTGTGCGC	T	2658.45	PASS	AB=0.897;AC=20;AF=0.370;AN=54;BaseQRankSum=5.791;DP=636;FS=1.343;HRun=0;HaplotypeScore=283.7562;InbreedingCoeff=0.5052;MQ=45.43;MQ0=39;MQRankSum=-2.608;QD=9.14;ReadPosRankSum=-2.093;VQSLOD=1.9626;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:56,0:50:14.85:15,0,42	0/0:10,0:10:11.62:0,12,316	0/0:8,0:3:6.02:0,6,155	0/0:9,0:1:1.55:0,2,4	0/0:23,0:22:27.08:0,27,1674	0/0:17,0:16:21.06:0,21,983	0/0:43,0:39:18.11:0,18,2982	0/1:14,0:11:24.03:24,0,419	0/0:14,0:13:29.65:0,30,1782	1/1:10,20:27:38.57:1124,39,0	0/1:5,12:16:0.01:0,0,1	1/1:8,15:23:3.01:185,3,0	1/1:5,7:12:5.72:319,6,0	1/1:12,18:27:12.04:571,12,0	0/0:22,0:22:26.88:0,27,1202	0/0:15,0:15:4.96:0,5,806	0/0:28,0:27:17.93:0,18,2173	1/1:18,0:17:4.64:301,5,0	0/0:10,0:9:20.66:0,21,797	0/0:16,0:14:30.99:0,31,2125	0/0:68,0:63:57.34:0,57,7228	1/1:6,11:16:2.07:32,2,0	1/1:9,13:18:2.37:9,2,0	./.	1/1:4,13:15:3.01:164,3,0	0/1:35,0:34:82.10:82,0,4659	0/0:22,0:22:52.06:0,52,3367	0/0:11,0:11:24.16:0,24,1555
chr10	92533306	.	TGTGCGCGC	T	2842.50	PASS	AB=0.960;AC=36;AF=0.720;AN=50;BaseQRankSum=1.004;DP=547;FS=9.130;HRun=0;HaplotypeScore=188.6448;InbreedingCoeff=-0.1928;MQ=47.13;MQ0=33;MQRankSum=-0.078;QD=5.66;ReadPosRankSum=-1.784;VQSLOD=1.7342;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,36:47:2.54:51,3,0	1/1:8,0:8:1.87:13,2,0	./.	./.	0/0:20,0:19:18.04:0,18,300	0/1:14,0:13:14.45:14,0,18	0/1:37,2:35:44.94:543,0,45	1/1:12,0:10:18:359,18,0	0/1:14,0:13:69.67:70,0,307	1/1:23,0:21:26.89:392,27,0	0/1:14,0:13:0:0,0,0	1/1:18,0:17:3.01:55,3,0	1/1:11,0:11:5.89:100,6,0	1/1:23,0:20:12.01:159,12,0	1/1:19,0:19:8.40:88,8,0	0/1:4,12:16:26.80:166,0,27	0/1:27,0:26:89.09:356,0,89	1/1:12,0:11:14.95:119,15,0	0/1:11,0:10:88.41:88,0,128	0/1:16,0:15:55.09:55,0,457	0/1:61,0:55:63.80:64,0,1251	1/1:14,0:13:2.67:23,3,0	1/1:17,0:15:2.73:22,3,0	./.	1/1:17,0:15:3.01:49,3,0	0/1:33,0:33:99:156,0,707	0/1:22,0:22:40.15:40,0,792	0/1:8,0:7:0.99:1,0,252
chr10	92533308	.	TGCGCGC	T	3393.12	PASS	AB=0.953;AC=41;AF=0.820;AN=50;BaseQRankSum=-1.153;DP=534;FS=9.665;HRun=0;HaplotypeScore=175.1007;InbreedingCoeff=-0.0899;MQ=47.00;MQ0=32;MQRankSum=-1.392;QD=6.92;ReadPosRankSum=-3.427;VQSLOD=1.2248;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:52,1:47:2.07:51,2,0	1/1:7,0:8:2.67:27,3,0	./.	./.	0/0:10,1:18:11.98:0,12,143	1/1:3,10:12:2.88:55,3,0	1/1:25,9:31:38.74:765,39,0	1/1:9,3:10:18:359,18,0	0/1:13,0:14:99:114,0,150	1/1:23,0:21:27.26:337,27,0	1/1:13,1:13:0.47:1,0,0	1/1:18,0:17:3.01:41,3,0	1/1:11,0:11:6.02:73,6,0	1/1:23,0:20:11.98:118,12,0	1/1:15,2:17:8.57:104,9,0	1/1:14,1:16:9.97:129,10,0	1/1:24,0:24:5.69:431,6,0	1/1:12,0:11:15.43:121,15,0	0/1:11,0:10:78.10:91,0,78	0/1:16,0:15:80.52:81,0,285	0/1:55,0:53:99:159,0,611	1/1:14,0:13:2.76:23,3,0	1/1:17,0:15:2.89:22,3,0	./.	1/1:17,0:15:3.01:35,3,0	0/1:30,0:32:99:179,0,257	0/1:19,0:21:59.17:59,0,468	0/1:8,0:7:20.04:20,0,140
chr10	92533742	.	AACAAACAC	A	4341.12	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=2.608;DP=624;FS=19.160;HRun=0;HaplotypeScore=179.0331;InbreedingCoeff=0.7898;MQ=69.04;MQ0=6;MQRankSum=-3.845;QD=16.70;ReadPosRankSum=1.193;VQSLOD=2.9447;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:7.82:0,8,266	0/0:10,0:10:17.32:0,17,215	0/0:50,0:29:78.05:0,78,1583	0/0:48,0:32:53.76:0,54,1323	0/0:12,0:12:29.70:0,30,581	0/0:21,0:21:63.13:0,63,1519	0/0:26,0:26:29.98:0,30,366	1/1:12,10:21:45.06:666,45,0	0/0:16,0:16:45.61:0,46,1494	1/1:23,0:23:58.34:941,58,0	1/1:17,0:16:23.23:219,23,0	1/1:19,0:19:32.90:370,33,0	1/1:20,0:20:40.13:691,40,0	1/1:16,0:16:20.42:180,20,0	0/0:27,0:27:24:0,24,303	0/0:10,0:8:21.07:0,21,778	0/0:22,0:22:59.62:0,60,1394	1/1:16,0:16:9.92:238,10,0	0/0:23,0:23:52.39:0,52,1333	0/0:25,0:25:66.21:0,66,1698	0/0:21,0:21:19.57:0,20,602	0/1:27,0:27:13.81:45,0,14	1/1:21,0:21:13.31:78,13,0	1/1:37,0:37:50.85:550,51,0	1/1:17,0:17:23.78:271,24,0	0/1:25,0:25:91.90:92,0,1713	0/0:11,0:10:6.02:0,6,167	0/0:6,0:5:3.01:0,3,125
chr10	92533746	.	AACAC	A	5514.80	PASS	AB=0.926;AC=23;AF=0.411;AN=56;BaseQRankSum=5.922;DP=625;FS=29.920;HRun=0;HaplotypeScore=144.1419;InbreedingCoeff=0.8530;MQ=64.20;MQ0=14;MQRankSum=-8.629;QD=21.46;ReadPosRankSum=0.027;VQSLOD=2.9419;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:1.73:0,2,171	0/0:10,0:10:17.83:0,18,184	0/0:54,0:30:74.65:0,75,1058	0/0:46,0:27:47.11:0,47,795	0/0:13,0:13:29.93:0,30,390	0/0:23,0:22:63.16:0,63,938	0/0:24,0:24:29.96:0,30,282	1/1:19,0:18:44.98:480,45,0	0/0:16,0:16:42.99:0,43,864	1/1:3,21:23:63.13:913,63,0	1/1:12,8:18:46.74:480,47,0	1/1:16,4:20:53.62:566,54,0	1/1:10,8:18:51.07:671,51,0	1/1:9,6:15:38.85:391,39,0	0/0:28,0:28:23.96:0,24,207	0/0:10,0:8:21.06:0,21,461	0/0:21,0:21:50.88:0,51,771	1/1:2,15:17:14.99:196,15,0	0/0:24,0:22:52.27:0,52,782	0/0:26,0:25:66.20:0,66,1076	0/0:18,0:18:17.11:0,17,445	1/1:0,24:24:42.95:291,43,0	1/1:4,17:21:35.48:233,35,0	1/1:31,5:36:74.70:765,75,0	1/1:9,9:17:47.70:497,48,0	0/1:23,2:24:32.10:32,0,1042	0/0:9,0:8:6.02:0,6,106	0/0:8,0:6:3.01:0,3,75
chr10	92533750	.	C	CACAA	2700.16	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-1.866;DP=626;FS=3.962;HRun=0;HaplotypeScore=162.3551;InbreedingCoeff=0.4624;MQ=61.80;MQ0=19;MQRankSum=2.577;QD=6.98;ReadPosRankSum=-0.836;VQSLOD=2.7494;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,28:40:10.81:52,11,0	1/1:10,0:10:14.13:125,14,0	0/0:55,0:30:37.84:0,38,396	0/0:47,0:29:22.46:0,22,355	0/1:13,0:13:7.80:72,0,8	1/1:26,0:25:19.77:452,20,0	1/1:25,0:25:8.84:56,9,0	0/1:18,0:16:16.89:17,0,79	1/1:18,0:17:35.82:271,36,0	0/0:24,0:22:27.20:0,27,334	0/0:21,0:19:5.57:0,6,67	0/0:20,0:20:0.16:0,0,135	0/0:18,0:18:9.96:0,10,204	0/1:16,0:16:10.66:11,0,35	1/1:27,0:27:2.98:21,3,0	1/1:9,0:7:18.05:290,18,0	1/1:21,0:21:48.33:425,48,0	0/1:17,0:17:7.98:8,0,78	1/1:19,0:17:5.08:194,5,0	1/1:25,0:24:48.46:334,48,0	1/1:19,0:17:17.75:125,18,0	1/1:25,0:24:2.24:4,2,0	1/1:19,0:19:9.33:43,9,0	0/0:35,0:35:4.32:0,4,129	0/0:18,0:17:11.66:0,12,87	0/1:23,0:22:1.87:314,0,2	1/1:9,0:8:5.98:46,6,0	1/1:8,0:6:2.98:22,3,0
chr10	92533764	.	CAA	C	1099.21	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=1.788;DP=630;FS=0.000;HRun=3;HaplotypeScore=159.8716;InbreedingCoeff=-0.1621;MQ=47.86;MQ0=24;MQRankSum=-2.413;QD=3.37;ReadPosRankSum=0.889;VQSLOD=-0.3458;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:43:33.93:34,0,58	0/0:10,0:10:14.85:0,15,112	0/0:49,0:18:50.09:0,50,660	0/0:50,0:24:43.63:0,44,584	0/0:12,0:12:23.33:0,23,193	0/0:20,2:21:35.63:0,36,352	0/1:20,0:19:13.13:13,0,64	0/1:20,0:16:84.31:84,0,212	0/0:18,0:17:38.98:0,39,476	0/1:29,0:27:99:244,0,195	0/1:22,0:20:71.91:92,0,72	0/1:17,0:17:40.34:114,0,40	0/1:15,0:15:50.51:146,0,51	1/1:15,0:15:14.64:102,15,0	0/0:24,1:25:3.85:0,4,22	0/0:7,4:9:21.31:0,21,197	0/1:25,0:25:5.01:5,0,372	0/1:15,0:15:38.42:44,0,38	0/0:17,0:15:24.71:0,25,362	0/0:27,0:26:68.57:0,69,612	0/0:14,0:11:23.69:0,24,238	0/0:27,0:25:8.76:0,9,39	0/1:20,0:20:13.27:18,0,13	0/1:39,0:39:69.96:201,0,70	0/1:17,0:16:2.45:116,0,2	0/1:29,0:27:45.30:45,0,495	0/0:14,0:13:5.91:0,6,55	0/0:8,0:6:3.01:0,3,42
chr10	92533766	.	AACAC	A	1195.99	PASS	AB=0.821;AC=16;AF=0.286;AN=56;BaseQRankSum=1.980;DP=642;FS=42.001;HRun=0;HaplotypeScore=178.0394;InbreedingCoeff=0.4417;MQ=46.34;MQ0=29;MQRankSum=-2.669;QD=5.20;ReadPosRankSum=0.898;VQSLOD=1.4646;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:6.77:0,7,44	0/0:1,0:13:6.01:0,6,85	0/0:49,0:17:33.53:0,34,562	0/0:47,0:21:33.83:0,34,444	0/0:10,0:12:9.01:0,9,121	0/0:20,0:22:17.96:0,18,214	0/0:3,0:20:2.99:0,3,23	1/1:21,0:16:8.28:70,8,0	0/0:15,0:15:30.10:0,30,472	1/1:23,6:28:16.45:423,16,0	0/1:15,8:20:22.98:23,0,34	1/1:15,4:19:17.59:149,18,0	1/1:5,8:13:22.78:280,23,0	0/0:9,6:15:1.25:0,1,12	0/0:1,0:25:0:0,0,0	0/0:14,0:13:21.03:0,21,293	0/0:26,0:26:27.66:0,28,245	1/1:12,2:14:2.83:152,3,0	0/0:17,0:15:19.76:0,20,263	0/0:27,0:26:18.06:0,18,289	0/0:14,0:11:12.04:0,12,196	0/0:18,9:25:2.90:0,3,16	1/1:14,7:21:1.25:6,1,0	0/1:38,4:42:54.91:162,0,55	0/1:10,8:17:1.31:46,0,1	0/1:27,2:27:51.17:51,0,525	0/0:15,0:14:8.98:0,9,99	0/0:8,0:6:3.01:0,3,49
chr10	92533768	.	C	CAA	4278.26	PASS	AB=0.728;AC=30;AF=0.536;AN=56;BaseQRankSum=-2.208;DP=648;FS=0.448;HRun=3;HaplotypeScore=169.4180;InbreedingCoeff=0.5404;MQ=45.67;MQ0=30;MQRankSum=0.573;QD=11.20;ReadPosRankSum=-2.905;VQSLOD=0.5744;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:42:7.19:42,7,0	0/1:11,0:11:13.71:58,0,14	0/0:47,0:16:47.70:0,48,569	0/0:46,0:20:49.33:0,49,545	0/1:6,10:16:5.25:147,0,5	1/1:25,0:24:21.44:391,21,0	1/1:20,0:19:12.33:86,12,0	0/0:22,0:16:31:0,31,168	1/1:13,4:16:36.08:630,36,0	0/0:29,0:27:59.94:0,60,344	0/0:21,0:18:7.87:0,8,101	0/1:20,0:20:5.46:5,0,140	0/0:13,0:13:35.16:0,35,223	0/0:14,0:14:5.77:0,6,43	1/1:25,0:25:3.45:22,3,0	1/1:15,0:13:23:214,23,0	1/1:26,0:26:29.82:344,30,0	0/0:14,0:14:7.60:0,8,70	0/1:5,12:16:3.15:430,0,3	1/1:5,22:26:43.53:508,44,0	1/1:5,10:12:20.38:274,20,0	1/1:27,0:25:0.53:4,1,0	1/1:21,0:21:13.73:63,14,0	0/0:43,0:43:12.30:0,12,226	0/0:17,0:16:16.25:0,16,130	0/1:7,21:26:2.17:841,0,2	0/1:6,12:17:11.61:122,0,12	1/1:5,6:9:8.94:98,9,0
chr10	92533782	.	C	CAT	387.05	PASS	AB=0.986;AC=24;AF=0.429;AN=56;BaseQRankSum=3.618;DP=603;FS=0.000;HRun=0;HaplotypeScore=168.8023;InbreedingCoeff=-0.0332;MQ=42.99;MQ0=25;MQRankSum=5.851;QD=1.00;ReadPosRankSum=0.392;VQSLOD=2.0172;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:36:7.21:7,0,18	0/1:10,0:10:1.08:1,0,20	0/0:36,0:13:33.06:0,33,455	0/0:35,0:16:32.50:0,32,365	0/1:18,0:18:1.80:2,0,34	0/1:20,0:20:12.30:12,0,14	1/1:18,0:17:5.60:39,6,0	0/0:20,0:14:21.15:0,21,256	1/1:16,0:15:23.27:83,23,0	0/0:31,0:28:7.53:0,8,430	0/1:21,0:20:33.49:33,0,60	0/1:18,2:20:28.21:28,0,110	0/0:17,0:17:10.08:0,10,152	1/1:18,0:18:2.91:10,3,0	0/0:26,0:26:8.97:0,9,71	0/1:16,0:14:25.99:32,0,26	0/0:23,0:23:22.65:0,23,175	0/0:14,0:14:13.56:0,14,112	0/0:14,0:14:12.49:0,12,148	0/1:22,0:21:29.03:36,0,29	1/1:16,0:13:8.89:29,9,0	1/1:24,0:22:1.81:6,2,0	0/1:16,1:17:15.75:37,0,16	0/1:40,2:42:70.33:112,0,70	0/1:17,0:16:16.12:16,0,29	0/1:25,0:23:58.95:59,0,90	0/1:23,0:22:4.84:5,0,53	0/1:8,0:7:3.12:3,0,12
chr10	92533786	.	C	CAG	1011.27	PASS	AB=0.988;AC=29;AF=0.518;AN=56;BaseQRankSum=5.831;DP=559;FS=18.154;HRun=0;HaplotypeScore=156.1121;InbreedingCoeff=-0.2164;MQ=42.29;MQ0=22;MQRankSum=5.278;QD=2.28;ReadPosRankSum=-0.306;VQSLOD=1.7323;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:7.69:8,0,17	0/1:10,0:10:1.12:1,0,20	0/0:28,0:9:24.08:0,24,349	0/0:25,0:11:12.20:0,12,272	1/1:17,0:17:10.06:59,10,0	0/1:19,0:19:10.28:13,0,10	0/1:13,0:12:7.19:43,0,7	0/0:19,0:16:38.71:0,39,369	1/1:15,0:15:29.18:128,29,0	0/1:29,0:28:48.43:48,0,427	0/1:21,0:20:29.91:30,0,42	0/1:19,0:19:46.28:46,0,64	0/1:16,0:16:41.33:41,0,91	1/1:13,6:19:2.66:43,3,0	0/0:20,0:20:11.85:0,12,87	0/1:15,0:13:5.94:34,0,6	0/0:21,0:21:26.22:0,26,192	0/1:14,1:15:78.51:88,0,79	0/1:12,0:12:52.75:53,0,65	0/1:23,0:22:24.13:70,0,24	1/1:15,0:13:8.89:29,9,0	1/1:22,0:20:3:43,3,0	1/1:16,0:17:5.04:50,5,0	0/1:35,1:37:39.40:134,0,39	0/1:14,2:15:32.52:33,0,44	0/1:27,0:25:64.37:86,0,64	0/1:21,0:20:54.80:86,0,55	0/1:9,0:8:10.39:12,0,10
chr10	92533790	.	C	CAGAGAG	3528.52	PASS	AB=0.920;AC=38;AF=0.731;AN=52;BaseQRankSum=0.170;DP=561;FS=2.487;HRun=0;HaplotypeScore=182.8709;InbreedingCoeff=0.3076;MQ=41.63;MQ0=18;MQRankSum=-0.998;QD=8.19;ReadPosRankSum=0.022;VQSLOD=2.1084;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:28:0.74:0,1,50	0/1:10,0:10:12.02:12,0,54	./.	./.	1/1:17,0:17:6.02:122,6,0	0/1:12,6:19:0:0,0,0	1/1:16,0:15:9.02:148,9,0	0/0:22,0:17:5.71:0,6,32	1/1:17,0:16:6.49:150,6,0	0/1:29,0:28:39.20:352,0,39	1/1:20,2:21:5.97:114,6,0	0/1:23,0:23:9.42:204,0,9	1/1:17,0:17:15.05:264,15,0	1/1:19,0:19:3.01:88,3,0	0/0:21,0:21:15.03:0,15,236	0/1:14,0:17:0:0,0,0	0/0:21,0:22:20.16:0,20,344	1/1:15,0:15:20.08:315,20,0	1/1:16,0:16:10.39:209,10,0	1/1:17,0:16:6.02:147,6,0	1/1:15,0:13:6.02:106,6,0	1/1:25,0:23:4.83:86,5,0	1/1:17,0:17:2.81:119,3,0	1/1:39,1:40:26.36:346,26,0	0/1:18,0:17:11.30:69,0,11	1/1:27,0:25:18.05:333,18,0	1/1:22,0:22:12.04:260,12,0	1/1:10,0:9:6.89:84,7,0
chr10	92533882	.	C	CGGG	383.66	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.572;DP=648;FS=2.589;HRun=0;HaplotypeScore=99.7159;InbreedingCoeff=0.9893;MQ=89.73;MQ0=0;MQRankSum=-1.165;QD=27.40;ReadPosRankSum=-3.254;VQSLOD=3.2318;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,2372	0/0:6,0:6:18.06:0,18,329	0/0:30,0:30:77.92:0,78,1274	0/0:22,0:22:50.26:0,50,847	0/0:16,0:16:48.16:0,48,894	0/0:20,0:20:54.18:0,54,983	0/0:28,0:28:78.25:0,78,1409	1/1:1,13:14:29.67:478,30,0	0/0:32,0:32:93.32:0,93,1718	0/0:39,0:39:99:0,111,1915	0/0:14,0:14:42.14:0,42,782	0/0:24,0:24:72.22:0,72,1281	0/0:25,0:25:72.22:0,72,1277	0/0:18,0:18:54.19:0,54,1002	0/0:27,0:27:78.25:0,78,1419	0/0:20,0:19:54.19:0,54,1004	0/0:34,0:34:99:0,99,1840	0/0:17,0:17:45.15:0,45,835	0/0:19,0:19:54.17:0,54,937	0/0:12,0:12:36.10:0,36,607	0/0:35,0:34:99:0,99,1751	0/0:20,0:20:60.21:0,60,1118	0/0:24,0:24:72.23:0,72,1300	0/0:32,0:32:90.31:0,90,1654	0/0:19,0:19:57.20:0,57,1061	0/0:31,0:31:87.27:0,87,1506	0/0:15,0:15:42.14:0,42,782	0/0:8,0:8:24.08:0,24,447
chr10	92536248	.	AAAAT	A	170.78	PASS	AB=0.857;AC=11;AF=0.250;AN=44;BaseQRankSum=-1.148;DP=252;FS=13.761;HRun=0;HaplotypeScore=54.0569;InbreedingCoeff=0.4270;MQ=55.12;MQ0=3;MQRankSum=1.013;QD=4.49;ReadPosRankSum=1.977;VQSLOD=0.2814;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:16:26.92:0,27,382	0/0:3,0:3:6.02:0,6,143	./.	./.	1/1:5,2:7:3.01:47,3,0	0/0:7,0:11:24.07:0,24,371	./.	0/0:30,0:28:21.06:0,21,315	./.	0/0:7,0:6:3.01:0,3,33	0/0:7,0:7:5.86:0,6,38	0/0:6,0:8:9.03:0,9,134	0/0:6,0:6:6.02:0,6,88	0/0:7,0:7:2.90:0,3,16	0/0:8,0:8:9.03:0,9,213	0/0:4,0:5:2.99:0,3,24	0/0:23,0:22:24.08:0,24,566	0/0:16,0:15:12.84:0,13,140	1/1:4,3:5:3.01:47,3,0	1/1:7,1:8:2.97:20,3,0	./.	./.	0/0:6,0:7:2.99:0,3,24	0/0:10,0:10:5.34:0,5,28	0/0:14,0:15:24.04:0,24,288	1/1:7,1:8:3.01:47,3,0	0/1:5,1:6:28.76:41,0,29	1/1:0,2:2:6.02:95,6,0
chr10	92536292	.	TA	T	1417.18	PASS	AB=0.833;AC=29;AF=0.518;AN=56;BaseQRankSum=0.709;DP=237;FS=0.654;HRun=13;HaplotypeScore=43.1244;InbreedingCoeff=0.7568;MQ=58.59;MQ0=6;MQRankSum=-1.816;QD=11.07;ReadPosRankSum=2.459;VQSLOD=2.8353;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,11:18:35.67:255,36,0	0/0:2,0:2:6:0,6,53	0/0:16,0:7:9.98:0,10,80	0/0:6,0:4:8.83:0,9,55	0/0:6,0:4:2.99:0,3,24	1/1:2,7:10:19.91:137,20,0	1/1:1,6:6:14.91:109,15,0	1/1:9,5:14:16.87:111,17,0	0/0:1,0:6:17.20:0,17,95	1/1:2,4:5:5.96:44,6,0	1/1:1,4:5:11.93:87,12,0	1/1:1,7:8:14.32:108,14,0	1/1:0,7:7:14.86:105,15,0	1/1:1,5:6:14.90:109,15,0	0/1:4,1:5:9.89:10,0,76	0/0:1,1:2:0:0,0,0	0/0:24,0:24:43.08:0,43,532	1/1:4,12:16:26.81:197,27,0	0/0:7,0:13:17.20:0,17,96	0/0:0,0:3:8.52:0,9,43	0/0:0,0:2:5.68:0,6,28	1/1:0,2:2:5.97:44,6,0	1/1:0,4:4:5.96:44,6,0	1/1:3,4:7:11.88:86,12,0	1/1:1,10:11:23.82:175,24,0	0/0:7,0:13:26.28:0,26,176	0/0:3,0:4:8.64:0,9,47	0/0:2,0:8:20.27:0,20,118
chr10	92536636	.	CTT	C	7935.79	PASS	AC=22;AF=0.407;AN=54;BaseQRankSum=10.759;DP=556;FS=1.930;HRun=3;HaplotypeScore=81.6742;InbreedingCoeff=0.9777;MQ=74.10;MQ0=1;MQRankSum=-0.985;QD=40.91;ReadPosRankSum=-0.138;VQSLOD=4.3397;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1953	./.	0/0:21,0:18:46.64:0,47,812	0/0:15,1:16:35.13:0,35,553	0/0:15,0:14:42.06:0,42,723	0/0:26,0:26:78.27:0,78,1506	0/0:37,0:37:99:0,108,2068	1/1:1,21:22:63.16:913,63,0	0/0:21,0:21:63.22:0,63,1209	1/1:3,14:16:45.15:672,45,0	1/1:1,4:5:12.03:159,12,0	1/1:1,33:34:90.30:1376,90,0	1/1:1,17:18:51.17:777,51,0	1/1:1,30:31:87.30:1331,87,0	0/0:17,0:17:45.15:0,45,870	0/0:17,0:17:48.16:0,48,922	0/0:29,0:29:84.29:0,84,1615	1/1:0,12:12:33.11:505,33,0	0/0:21,0:21:63.22:0,63,1217	0/0:3,0:3:9.03:0,9,174	0/0:54,0:54:99:0,160,2997	1/1:1,17:17:48.16:733,48,0	1/1:1,8:9:24.08:367,24,0	1/1:3,20:23:63.21:963,63,0	1/1:1,4:5:9.03:138,9,0	0/0:27,0:27:81.28:0,81,1546	0/0:9,0:9:27.08:0,27,488	0/0:11,0:11:27.09:0,27,501
chr10	92536712	.	CA	C	5088.89	PASS	AB=0.830;AC=39;AF=0.696;AN=56;BaseQRankSum=8.442;DP=447;FS=1.527;HRun=11;HaplotypeScore=75.5395;InbreedingCoeff=0.5685;MQ=74.51;MQ0=0;MQRankSum=-1.684;QD=13.64;ReadPosRankSum=2.632;VQSLOD=5.2729;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,36:43:62.83:753,63,0	1/1:1,0:4:6.11:18,6,0	0/1:13,3:14:24.80:25,0,234	0/1:17,1:15:11.28:11,0,92	0/1:8,1:9:6.60:7,0,142	1/1:0,11:11:32.96:271,33,0	1/1:4,14:18:32.94:271,33,0	1/1:9,24:33:79.94:638,80,0	0/1:12,2:15:17.05:17,0,267	1/1:2,15:17:44.44:353,44,0	1/1:1,3:4:8.99:74,9,0	1/1:4,15:20:46.97:375,47,0	1/1:5,14:19:29.89:329,30,0	1/1:7,14:21:39.40:321,39,0	1/1:2,0:16:22.40:65,22,0	0/1:4,6:10:14.01:105,0,14	1/1:4,0:40:61.10:177,61,0	1/1:3,11:14:32.95:271,33,0	0/0:15,0:17:38.76:0,39,375	0/0:5,0:5:14.38:0,14,127	0/0:24,0:26:56.80:0,57,565	1/1:2,6:8:20.97:172,21,0	1/1:1,5:6:17.98:148,18,0	1/1:3,20:23:60.40:493,60,0	1/1:0,8:8:23.97:197,24,0	0/0:12,0:12:24.52:0,25,245	0/0:11,0:11:32.82:0,33,302	0/0:3,0:3:9.02:0,9,95
chr10	92536944	.	G	GGAGGAAGGGGGA	9210.30	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-2.224;DP=325;FS=0.736;HRun=0;HaplotypeScore=83.6587;InbreedingCoeff=0.8349;MQ=74.57;MQ0=1;MQRankSum=-7.062;QD=46.75;ReadPosRankSum=1.017;VQSLOD=4.5187;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.16:0,48,1382	0/0:3,0:3:6.02:0,6,154	0/0:30,0:20:38.83:0,39,636	0/0:39,0:19:31.98:0,32,562	1/1:4,0:4:12.03:210,12,0	0/0:7,0:6:18.05:0,18,436	0/0:10,0:10:24.08:0,24,709	1/1:21,0:21:51.63:1088,52,0	1/1:1,10:11:6.02:333,6,0	1/1:0,7:9:24.06:942,24,0	1/1:0,4:5:3.01:112,3,0	1/1:0,6:10:6.02:337,6,0	1/1:1,8:14:12.04:728,12,0	1/1:15,0:15:42.06:1229,42,0	0/0:7,0:7:21.06:0,21,408	0/0:5,0:5:15.04:0,15,396	0/0:9,0:9:24.08:0,24,730	1/1:5,0:5:12.04:475,12,0	1/1:9,0:9:24.55:456,25,0	1/1:0,6:11:12.04:242,12,0	1/1:1,17:23:9.50:318,10,0	1/1:1,14:17:15.05:407,15,0	1/1:4,0:4:12:231,12,0	1/1:10,0:10:18.53:601,19,0	1/1:0,9:13:6.02:319,6,0	1/1:8,0:8:21.07:595,21,0	1/1:1,4:7:8.73:549,9,0	1/1:1,0:1:3.01:37,3,0
chr10	92537810	.	C	CTTCTTTT	3489.94	PASS	AB=0.781;AC=23;AF=0.426;AN=54;BaseQRankSum=0.425;DP=317;FS=0.546;HRun=0;HaplotypeScore=91.9291;InbreedingCoeff=0.4466;MQ=75.82;MQ0=10;MQRankSum=-4.901;QD=20.77;ReadPosRankSum=-4.415;VQSLOD=1.3230;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:18:28.18:0,28,535	0/0:1,0:1:3:0,3,27	0/0:31,0:13:29.56:0,30,260	0/0:32,0:18:21.27:0,21,375	1/1:2,5:10:3.01:85,3,0	0/0:5,0:5:15.03:0,15,234	0/0:11,0:11:19.06:0,19,216	0/1:6,0:12:9.48:10,0,9	1/1:13,0:13:26.11:191,26,0	0/0:3,0:3:8.99:0,9,92	0/1:6,0:8:12.68:13,0,95	0/1:4,0:7:7.38:7,0,114	0/1:11,0:13:7.03:7,0,102	0/0:8,0:9:20.66:0,21,223	0/0:7,0:7:11.91:0,12,256	0/0:10,0:10:27.04:0,27,506	0/0:15,0:15:25.79:0,26,542	0/1:6,0:4:8.82:9,0,34	1/1:7,7:22:54.01:1209,54,0	1/1:9,1:10:20.91:298,21,0	1/1:7,1:8:17.87:200,18,0	./.	0/0:1,0:3:3.09:0,3,79	0/1:6,0:7:8.15:8,0,81	0/1:4,0:7:5.42:5,0,80	1/1:3,12:19:48.03:1061,48,0	1/1:13,0:12:29.73:241,30,0	1/1:9,0:7:14.98:145,15,0
chr10	92537828	.	C	CTTTTT	1448.94	PASS	AB=1.000;AC=14;AF=0.292;AN=48;BaseQRankSum=3.765;DP=238;FS=2.953;HRun=2;HaplotypeScore=52.6524;InbreedingCoeff=0.5659;MQ=73.10;MQ0=30;MQRankSum=-3.643;QD=37.15;ReadPosRankSum=-1.777;VQSLOD=0.3714;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:42.10:0,42,751	0/0:2,0:2:0:0,0,0	0/0:40,0:9:20.62:0,21,259	0/0:40,0:20:10.66:0,11,277	1/1:4,0:4:3.01:62,3,0	0/0:3,0:3:6.02:0,6,119	0/0:5,0:6:12.04:0,12,195	0/0:10,0:7:6.02:0,6,121	./.	./.	0/1:4,0:4:15.39:15,0,114	0/0:8,0:8:15.04:0,15,206	0/0:9,0:9:12.03:0,12,156	0/0:7,0:6:14.94:0,15,199	0/0:6,0:6:15.05:0,15,308	0/0:5,0:5:12.04:0,12,191	0/0:17,0:14:30.04:0,30,455	0/0:9,0:4:8.97:0,9,110	1/1:7,3:9:27.09:739,27,0	1/1:4,0:3:5.38:73,5,0	1/1:1,1:2:3.01:87,3,0	./.	0/0:6,0:6:3.01:0,3,60	0/0:5,0:5:8.06:0,8,119	0/1:3,0:3:0.58:1,0,57	1/1:7,1:8:23.87:532,24,0	1/1:4,0:4:3.01:89,3,0	./.
chr10	92538107	.	CGTGTGTGTGT	C	2448.44	PASS	AB=0.886;AC=18;AF=0.346;AN=52;BaseQRankSum=2.488;DP=598;FS=11.287;HRun=0;HaplotypeScore=172.6173;InbreedingCoeff=0.5851;MQ=62.55;MQ0=6;MQRankSum=-7.265;QD=12.30;ReadPosRankSum=1.133;VQSLOD=1.6912;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:38:3.01:0,3,43	0/0:5,0:5:3.01:0,3,149	./.	./.	0/0:15,0:18:9.01:0,9,286	0/0:14,0:20:15.05:0,15,327	0/0:14,0:25:21.07:0,21,346	0/0:24,0:24:0.47:0,0,1	0/0:16,0:21:24.55:0,25,1033	1/1:8,2:11:6.02:174,6,0	1/1:9,2:12:3.01:89,3,0	1/1:16,16:34:41.80:1100,42,0	1/1:12,8:22:15:407,15,0	1/1:6,3:9:6.02:178,6,0	0/0:19,0:30:45.14:0,45,1730	0/0:14,0:20:17.23:0,17,258	0/1:28,0:50:1.35:1,0,2796	0/1:19,8:27:48.73:256,0,49	0/0:14,0:18:17.42:0,17,656	0/0:9,0:9:6.02:0,6,113	0/0:26,0:37:16.61:0,17,472	1/1:11,2:13:3.01:89,3,0	1/1:9,1:13:6.02:159,6,0	0/0:21,7:28:0.47:0,0,1	1/1:5,2:8:6.02:159,6,0	0/0:27,0:31:39.13:0,39,1364	0/0:13,0:21:39.45:0,39,1544	0/0:1,0:7:6.02:0,6,253
chr10	92538319	.	GACAA	G	5943.90	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=7.100;DP=717;FS=2.735;HRun=0;HaplotypeScore=189.1474;InbreedingCoeff=0.9378;MQ=59.28;MQ0=5;MQRankSum=-7.876;QD=19.81;ReadPosRankSum=1.099;VQSLOD=4.7323;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:90.57:0,91,2094	0/0:7,0:7:18.04:0,18,428	0/0:54,0:37:73.81:0,74,1589	0/0:66,0:43:55.41:0,55,1441	0/0:15,0:15:38.87:0,39,543	1/1:1,20:21:26.66:511,27,0	1/1:0,17:17:14.51:283,15,0	1/1:10,14:24:66.16:960,66,0	0/0:33,0:33:57.10:0,57,1248	1/1:9,20:29:84.15:1232,84,0	1/1:5,8:13:2.90:48,3,0	1/1:10,21:31:29.35:399,29,0	1/1:5,9:14:26.69:339,27,0	1/1:4,15:19:17.36:230,17,0	0/0:28,0:28:81.14:0,81,1920	1/1:3,34:37:60.06:1053,60,0	0/0:29,0:29:74.96:0,75,1662	1/1:5,6:11:26.53:334,27,0	0/0:18,0:18:45.14:0,45,948	0/0:12,0:12:32.99:0,33,544	0/0:47,0:47:76.96:0,77,1741	1/1:10,18:28:14.80:196,15,0	1/1:7,14:21:14.82:197,15,0	1/1:11,14:25:5.75:44,6,0	1/1:2,8:10:8.59:117,9,0	0/0:35,0:35:99:0,99,2331	0/0:30,0:30:42.06:0,42,935	0/0:7,0:7:12.04:0,12,290
chr10	92538327	.	GAC	G	2185.11	PASS	AB=0.647;AC=19;AF=0.339;AN=56;BaseQRankSum=7.066;DP=741;FS=5.645;HRun=0;HaplotypeScore=191.8724;InbreedingCoeff=0.8211;MQ=59.72;MQ0=6;MQRankSum=-9.699;QD=10.98;ReadPosRankSum=-1.814;VQSLOD=2.9229;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:75.18:0,75,1189	0/0:6,0:6:18.06:0,18,302	0/0:62,0:41:80.40:0,80,1144	0/0:74,0:50:42.20:0,42,1177	0/0:19,0:19:33.11:0,33,550	0/0:22,0:22:30.96:0,31,216	0/0:18,0:18:15.96:0,16,105	1/1:10,14:24:61.98:675,62,0	0/0:32,0:32:42.14:0,42,700	1/1:6,26:32:74.67:746,75,0	1/1:2,11:13:2.90:31,3,0	1/1:5,20:27:22.34:203,22,0	1/1:7,10:17:23.43:224,23,0	1/1:3,15:18:15.94:144,16,0	0/0:27,0:27:75.26:0,75,1262	0/0:41,0:41:67.80:0,68,492	0/0:28,0:28:60.14:0,60,986	0/1:5,6:11:19.01:162,0,19	0/0:19,0:19:41.95:0,42,545	0/0:12,0:12:27.08:0,27,426	0/0:52,0:52:53.95:0,54,859	1/1:8,18:26:8.90:91,9,0	1/1:7,15:21:10.74:74,11,0	0/0:9,14:23:0:0,0,0	1/1:1,8:9:4.34:34,4,0	0/0:35,0:35:87.25:0,87,1384	0/0:28,0:28:39.12:0,39,638	0/0:8,0:8:12.04:0,12,197
chr10	92538329	.	C	CAG	1032.57	PASS	AB=0.971;AC=13;AF=0.232;AN=56;BaseQRankSum=6.773;DP=768;FS=6.848;HRun=0;HaplotypeScore=210.0365;InbreedingCoeff=0.1478;MQ=58.50;MQ0=7;MQRankSum=-9.021;QD=4.28;ReadPosRankSum=0.010;VQSLOD=2.3093;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:77.81:0,78,1096	0/0:6,0:6:18.06:0,18,274	0/0:65,0:43:98.91:0,99,1187	0/0:75,0:50:94.87:0,95,1333	0/0:18,0:18:39.10:0,39,544	0/0:23,0:23:32.89:0,33,446	0/0:18,0:18:17.84:0,18,235	1/1:18,11:29:22.84:430,23,0	0/0:32,0:32:54.11:0,54,734	1/1:32,0:32:0.09:328,0,0	0/1:14,0:14:16.19:51,0,16	0/1:30,0:31:17.26:17,0,20	0/1:14,3:18:36.45:98,0,36	0/1:20,0:20:7.06:50,0,7	0/0:31,0:31:81.20:0,81,1182	0/0:37,0:37:75.49:0,75,942	0/0:29,0:29:66.06:0,66,930	0/1:12,0:12:15.88:71,0,16	0/0:20,0:20:56.99:0,57,656	0/0:12,0:12:33.07:0,33,438	0/0:53,0:53:65.74:0,66,877	0/1:27,0:27:33.58:95,0,34	0/1:20,2:21:39.65:40,0,71	0/1:27,0:27:0:0,0,0	0/1:9,0:9:0.21:0,0,20	0/0:36,0:36:99:0,102,1381	0/0:28,0:28:41.97:0,42,615	0/0:8,0:8:12.04:0,12,183
chr10	92538354	.	GACAACAC	G	54.06	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=1.792;DP=768;FS=12.071;HRun=0;HaplotypeScore=251.4971;InbreedingCoeff=0.4461;MQ=59.61;MQ0=18;MQRankSum=-4.092;QD=1.15;ReadPosRankSum=-4.695;VQSLOD=0.5608;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:61.09:0,61,1100	0/0:5,0:5:12.01:0,12,347	0/0:74,0:38:97.96:0,98,2781	0/0:89,0:45:81.79:0,82,2529	0/0:19,0:19:38.23:0,38,573	0/0:22,0:22:38.88:0,39,643	0/0:21,0:21:30.04:0,30,422	0/0:34,0:32:87.23:0,87,2826	0/0:29,0:29:41.62:0,42,626	0/0:33,0:32:84.67:0,85,2461	0/0:13,0:12:9.03:0,9,318	0/0:30,0:30:16.35:0,16,385	0/0:20,0:20:21.29:0,21,490	0/0:18,0:18:17.58:0,18,366	0/0:30,0:29:43.66:0,44,2331	0/0:31,0:30:65.03:0,65,952	0/0:32,0:32:12.47:0,12,1743	0/0:14,0:13:20.30:0,20,669	0/0:19,0:18:51.11:0,51,892	0/0:17,0:17:35.02:0,35,469	0/0:40,0:40:27.23:0,27,461	0/0:21,4:25:12.04:0,12,449	0/1:22,0:21:53.12:53,0,313	1/1:25,0:25:7.63:97,8,0	0/0:9,0:9:3:0,3,117	0/0:28,0:28:81.25:0,81,1475	0/0:29,0:29:41.24:0,41,687	0/0:11,0:11:18.06:0,18,307
chr10	92538357	.	AAC	A	4533.77	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=1.271;DP=746;FS=6.135;HRun=0;HaplotypeScore=189.6171;InbreedingCoeff=0.9235;MQ=58.94;MQ0=19;MQRankSum=4.565;QD=15.58;ReadPosRankSum=2.563;VQSLOD=4.5504;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:53.69:433,54,0	0/0:4,0:4:8.96:0,9,69	0/0:68,0:35:70.99:0,71,630	0/0:85,0:42:73.81:0,74,649	1/1:3,17:20:26.54:210,27,0	1/1:19,0:21:32.62:266,33,0	1/1:20,0:19:11.69:99,12,0	0/0:32,0:30:83.68:0,84,682	1/1:5,23:28:36.03:453,36,0	0/0:27,0:31:80.25:0,80,710	0/0:9,0:11:9.43:0,9,83	0/0:16,0:28:29:0,29,220	0/0:16,0:21:29.67:0,30,198	0/0:13,0:19:17.52:0,18,114	0/0:31,0:30:68.66:0,69,626	1/1:31,1:31:68.47:541,68,0	0/0:33,0:33:54.78:0,55,528	0/0:10,0:13:32.42:0,32,205	1/1:5,14:18:50.91:494,51,0	1/1:3,14:17:20.83:226,21,0	1/1:3,36:40:20.90:259,21,0	0/0:17,0:21:11.89:0,12,123	0/0:19,0:20:11.22:0,11,123	0/0:13,0:24:4.54:0,5,49	0/0:8,0:9:2.99:0,3,23	1/1:1,28:28:80.75:828,81,0	1/1:2,27:29:38.54:468,39,0	1/1:0,11:11:18.06:256,18,0
chr10	92538359	.	CACAG	C	4555.54	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=1.194;DP=755;FS=1.698;HRun=0;HaplotypeScore=204.9986;InbreedingCoeff=0.9610;MQ=58.98;MQ0=18;MQRankSum=4.685;QD=15.71;ReadPosRankSum=3.834;VQSLOD=4.2710;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,3:27:44.61:565,45,0	0/0:4,0:4:8.96:0,9,69	0/0:66,0:34:70.89:0,71,630	0/0:82,0:40:71.81:0,72,642	1/1:19,1:20:21.24:177,21,0	1/1:20,1:22:27.66:317,28,0	1/1:17,2:18:14.36:171,14,0	0/0:31,0:29:83.68:0,84,687	1/1:25,3:28:36.07:438,36,0	0/0:34,0:33:86.81:0,87,938	0/0:13,0:12:14.94:0,15,164	0/0:27,0:28:29.23:0,29,334	0/0:21,0:21:32.79:0,33,350	0/0:20,0:20:20.36:0,20,182	0/0:36,0:35:68.71:0,69,793	1/1:23,7:30:73.09:816,73,0	0/0:32,0:32:65.02:0,65,705	0/0:14,0:13:32.24:0,32,216	1/1:18,1:18:50.59:481,51,0	1/1:15,0:15:17.17:155,17,0	1/1:39,0:39:20.73:201,21,0	0/0:23,0:23:12.79:0,13,151	0/0:24,0:23:25.29:0,25,303	0/0:25,0:25:8.37:0,8,88	0/0:11,0:11:8.92:0,9,129	1/1:29,0:28:78.87:691,79,0	1/1:28,1:29:31.76:369,32,0	1/1:11,0:11:18.03:176,18,0
chr10	92538361	.	C	CAGAG	2541.42	PASS	AB=1.000;AC=27;AF=0.519;AN=52;BaseQRankSum=-7.193;DP=812;FS=7.038;HRun=0;HaplotypeScore=237.7599;InbreedingCoeff=0.5847;MQ=56.86;MQ0=18;MQRankSum=-1.282;QD=5.25;ReadPosRankSum=-3.628;VQSLOD=1.3410;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:1.77:2,0,23	./.	./.	0/1:80,0:38:0:0,0,0	0/0:23,0:23:8.28:0,8,48	0/1:22,0:22:12.27:12,0,34	0/1:22,0:21:3.75:4,0,23	1/1:34,0:32:9.19:37,9,0	0/0:28,0:28:30.62:0,31,249	0/1:36,0:35:14.94:320,0,15	1/1:16,1:16:5.03:197,5,0	1/1:25,9:36:15.01:291,15,0	1/1:23,0:24:14.99:286,15,0	1/1:25,0:25:8.27:86,8,0	1/1:20,16:39:23.80:459,24,0	0/0:32,0:30:10.95:0,11,175	1/1:18,3:38:26.83:479,27,0	1/1:14,0:13:9:108,9,0	0/0:23,0:22:14.12:0,14,141	0/0:15,0:15:6.05:0,6,92	0/0:42,0:42:14.86:0,15,146	0/0:26,0:26:2.11:0,2,24	1/1:24,0:23:23.86:263,24,0	1/1:19,6:32:8.63:138,9,0	1/1:15,0:15:6.28:44,6,0	0/0:31,0:30:23.79:0,24,212	0/0:32,0:32:36.33:0,36,285	0/0:11,0:11:17.87:0,18,165
chr10	92540095	.	C	CG	3230.05	PASS	AB=1.000;AC=45;AF=0.865;AN=52;BaseQRankSum=1.107;DP=377;FS=2.253;HRun=1;HaplotypeScore=71.0409;InbreedingCoeff=0.5728;MQ=42.03;MQ0=33;MQRankSum=1.409;QD=10.13;ReadPosRankSum=-1.466;VQSLOD=1.0028;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:2:2.94:0,3,18	1/1:10,0:1:3:25,3,0	./.	1/1:15,0:15:27.20:205,27,0	1/1:13,0:13:30.36:209,30,0	1/1:16,0:16:8.94:75,9,0	1/1:8,15:18:38.60:265,39,0	1/1:14,0:14:26.86:207,27,0	1/1:15,1:15:35.79:278,36,0	1/1:13,0:13:29.55:200,30,0	1/1:5,9:14:5.75:48,6,0	1/1:14,0:14:29.48:195,29,0	1/1:4,8:12:5.68:42,6,0	0/0:8,0:8:11.83:0,12,81	1/1:12,0:12:3.01:30,3,0	0/0:20,0:19:23.79:0,24,163	0/1:16,0:11:20.35:92,0,20	1/1:16,0:15:25.62:175,26,0	1/1:11,0:10:23.78:174,24,0	1/1:10,0:8:11.98:99,12,0	1/1:16,0:14:29.69:213,30,0	1/1:10,0:8:14.79:99,15,0	1/1:10,0:10:11:83,11,0	1/1:13,0:13:26.82:204,27,0	1/1:17,0:17:38.70:291,39,0	1/1:10,0:10:14.89:108,15,0	1/1:17,0:9:8.76:51,9,0
chr10	92540096	.	G	GGAA	4443.04	PASS	AB=1.000;AC=49;AF=0.907;AN=54;BaseQRankSum=1.731;DP=445;FS=5.052;HRun=0;HaplotypeScore=117.8824;InbreedingCoeff=0.1886;MQ=41.35;MQ0=34;MQRankSum=0.863;QD=10.21;ReadPosRankSum=-3.050;VQSLOD=3.8597;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:19:9.37:65,9,0	0/0:4,0:2:2.69:0,3,18	1/1:12,0:2:2.04:6,2,0	./.	1/1:22,0:21:38.49:280,38,0	1/1:13,0:14:35.41:256,35,0	1/1:6,10:20:3.48:69,3,0	1/1:26,0:22:41.48:277,41,0	1/1:16,0:16:38.55:320,39,0	1/1:18,0:17:37.50:283,38,0	1/1:15,0:15:33.85:222,34,0	1/1:16,0:16:6.64:51,7,0	1/1:16,0:16:30.68:195,31,0	1/1:12,0:13:8.25:59,8,0	0/1:9,0:9:6.95:7,0,64	1/1:0,0:13:3.01:36,3,0	0/1:25,0:24:26.37:26,0,129	0/1:18,0:13:27.01:74,0,27	1/1:18,0:17:37.90:258,38,0	1/1:16,0:17:45.20:351,45,0	1/1:13,0:11:24.88:217,25,0	1/1:17,0:16:32.13:219,32,0	1/1:12,0:10:16.15:102,16,0	1/1:9,0:10:9.90:72,10,0	1/1:15,0:15:28.18:208,28,0	1/1:23,0:23:60.42:436,60,0	1/1:14,0:14:28.15:199,28,0	1/1:18,0:10:20.06:154,20,0
chr10	92541277	.	TACACACAC	T	3412.84	PASS	AB=0.909;AC=30;AF=0.577;AN=52;BaseQRankSum=1.157;DP=428;FS=5.647;HRun=0;HaplotypeScore=123.2648;InbreedingCoeff=0.4485;MQ=57.33;MQ0=7;MQRankSum=0.042;QD=12.93;ReadPosRankSum=0.271;VQSLOD=2.1670;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:18:9.03:123,9,0	0/0:11,0:10:30.10:0,30,898	0/0:12,0:6:9.01:0,9,208	0/0:7,0:2:3.01:0,3,95	1/1:0,13:13:3.01:70,3,0	1/1:23,0:23:9.03:200,9,0	1/1:15,5:18:6.02:147,6,0	0/0:43,0:42:50.36:0,50,857	1/1:9,0:9:18.06:462,18,0	1/1:16,0:15:1.29:8,1,0	0/1:6,0:14:25.61:26,0,37	0/0:19,0:19:6.74:0,7,17	0/1:11,0:11:27.13:27,0,50	0/0:13,0:13:0.36:0,0,4	0/0:13,0:13:30.10:0,30,949	1/1:17,0:18:18.06:384,18,0	0/0:13,0:13:30.10:0,30,877	0/1:19,0:19:15.60:16,0,52	1/1:12,2:13:6.02:151,6,0	1/1:9,9:18:3.01:72,3,0	1/1:14,0:14:18.05:345,18,0	0/0:2,0:5:3:0,3,26	./.	0/1:18,0:16:1.56:2,0,27	./.	1/1:4,16:19:45.15:1137,45,0	1/1:5,9:14:3.01:73,3,0	1/1:4,0:4:9.03:172,9,0
chr10	92541297	.	CACACACACAGAGAGAGAGAGAGAG	C	2578.81	PASS	AB=1.000;AC=17;AF=0.315;AN=54;BaseQRankSum=1.331;DP=451;FS=0.691;HRun=0;HaplotypeScore=230.2954;InbreedingCoeff=-0.0280;MQ=50.44;MQ0=9;MQRankSum=-1.738;QD=11.16;ReadPosRankSum=1.656;VQSLOD=2.5653;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:22:32.28:32,0,58	0/0:14,0:13:38.34:0,38,2105	0/0:7,0:3:9.01:0,9,208	0/0:5,0:1:3.01:0,3,95	0/1:18,0:17:43.04:43,0,211	1/1:5,19:24:9.03:596,9,0	1/1:13,0:11:9.03:264,9,0	0/0:36,0:34:83.47:0,83,1601	0/1:10,0:10:99:130,0,895	0/0:17,0:16:27.20:0,27,1219	0/1:11,0:11:22.60:23,0,134	0/0:17,0:17:36.12:0,36,1373	0/1:15,0:15:10.21:10,0,1037	0/0:20,0:20:29.31:0,29,972	0/0:18,0:18:33.11:0,33,1648	1/1:5,15:19:17.71:1032,18,0	0/0:15,0:15:45.15:0,45,2245	0/0:21,0:21:53.63:0,54,2289	0/1:16,0:15:99:121,0,1579	0/1:13,0:13:65.52:66,0,151	0/1:11,0:11:53.05:53,0,411	0/0:5,0:5:3:0,3,26	./.	0/0:21,0:19:30.18:0,30,1243	0/0:17,0:17:3.01:0,3,122	0/1:31,0:29:99:246,0,3020	0/1:21,0:21:45.22:45,0,1319	0/1:5,0:5:82.87:83,0,203
chr10	92541299	.	CACACACAG	C	4233.27	PASS	AB=1.000;AC=36;AF=0.692;AN=52;BaseQRankSum=8.342;DP=448;FS=0.514;HRun=0;HaplotypeScore=126.9895;InbreedingCoeff=0.2175;MQ=50.52;MQ0=9;MQRankSum=1.741;QD=11.82;ReadPosRankSum=3.613;VQSLOD=2.9872;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:22:9.03:187,9,0	0/0:14,0:13:16.79:0,17,691	0/0:7,0:3:6.02:0,6,128	0/0:5,0:1:3.01:0,3,70	0/1:18,0:17:18.93:46,0,19	1/1:24,0:24:9.03:170,9,0	1/1:13,0:11:8.92:122,9,0	0/0:35,0:33:1.55:0,2,396	0/1:9,0:9:23.84:291,0,24	1/1:17,0:16:15.34:218,15,0	1/1:11,0:11:5.95:69,6,0	1/1:19,0:19:47.31:340,47,0	1/1:14,0:14:9.34:230,9,0	1/1:20,0:20:35.60:259,36,0	0/0:19,0:19:2.51:0,3,675	1/1:20,0:19:18.03:332,18,0	0/1:15,0:15:29.42:29,0,608	1/1:21,0:21:35.04:372,35,0	0/1:16,0:15:89.47:89,0,110	1/1:12,0:12:5.97:72,6,0	1/1:10,0:10:18:262,18,0	./.	./.	1/1:21,0:19:29.62:221,30,0	1/1:2,15:17:2.98:21,3,0	0/1:30,0:28:51.72:738,0,52	0/1:23,0:23:64.42:64,0,105	1/1:5,0:5:8.09:100,8,0
chr10	92541301	.	CACACAGAG	C	5538.46	PASS	AB=1.000;AC=43;AF=0.796;AN=54;BaseQRankSum=5.239;DP=441;FS=3.589;HRun=0;HaplotypeScore=122.1684;InbreedingCoeff=-0.1478;MQ=50.48;MQ0=9;MQRankSum=1.761;QD=12.79;ReadPosRankSum=3.461;VQSLOD=3.6231;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:22:9.03:115,9,0	0/1:14,0:13:8.89:9,0,423	0/1:4,0:2:16.70:17,0,49	0/0:4,0:1:3.01:0,3,46	0/1:18,0:17:28.39:28,0,44	1/1:24,0:24:9.03:168,9,0	1/1:13,0:11:9.02:98,9,0	1/1:33,0:31:14.52:137,15,0	0/1:9,0:9:73.74:153,0,74	1/1:3,14:16:32.32:480,32,0	1/1:9,0:9:6.02:69,6,0	1/1:19,0:19:45.15:671,45,0	1/1:14,0:14:30.57:438,31,0	1/1:21,0:21:39.12:566,39,0	0/1:19,0:19:45.97:46,0,437	1/1:20,0:19:18.03:314,18,0	0/1:15,0:15:90.18:90,0,392	1/1:20,0:21:56.27:840,56,0	0/1:16,0:15:72:72,0,272	1/1:12,0:12:2.30:34,2,0	1/1:9,0:9:16.28:177,16,0	./.	1/1:7,0:7:3.01:44,3,0	1/1:20,0:18:30.10:441,30,0	1/1:17,0:17:3.01:44,3,0	0/1:30,0:28:99:417,0,232	0/1:24,0:24:39.66:40,0,270	1/1:5,0:5:1.85:31,2,0
chr10	92541305	.	CAGAGAGAGAGAG	C	635.16	PASS	AB=0.793;AC=7;AF=0.140;AN=50;BaseQRankSum=5.279;DP=445;FS=6.933;HRun=0;HaplotypeScore=164.0109;InbreedingCoeff=0.6057;MQ=50.49;MQ0=7;MQRankSum=-4.694;QD=8.04;ReadPosRankSum=2.439;VQSLOD=2.0904;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,6:22:0.01:0,0,0	0/0:13,0:12:25.63:0,26,550	./.	./.	0/0:19,0:18:3.01:0,3,150	1/1:22,0:24:9.03:251,9,0	1/1:8,0:10:3.01:84,3,0	0/0:30,0:29:18.06:0,18,284	0/0:9,0:9:18.03:0,18,552	0/0:18,0:17:29.82:0,30,432	0/0:9,0:9:3.01:0,3,63	0/0:19,0:19:28.61:0,29,360	0/0:16,0:16:20.93:0,21,340	0/0:22,0:22:19.30:0,19,318	0/0:20,0:20:17.85:0,18,389	1/1:20,0:19:15:418,15,0	0/0:15,0:15:23.91:0,24,558	0/0:22,0:22:33.51:0,34,692	0/0:16,0:15:24.06:0,24,1063	0/0:12,0:12:3.01:0,3,81	0/0:9,0:9:17.69:0,18,186	./.	0/0:7,0:7:3.01:0,3,56	0/0:22,0:20:23.82:0,24,479	0/0:17,0:17:3.01:0,3,51	0/0:31,0:29:66.49:0,66,1843	0/0:26,0:26:38.90:0,39,1530	0/0:3,0:3:5.97:0,6,97
chr10	92542568	.	T	TG	3693.13	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-10.572;DP=453;FS=3.379;HRun=3;HaplotypeScore=52.9296;InbreedingCoeff=0.9170;MQ=69.95;MQ0=4;MQRankSum=1.855;QD=36.21;ReadPosRankSum=1.623;VQSLOD=4.2716;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,40:44:99:1677,120,0	0/0:3,0:3:9.03:0,9,108	0/0:21,0:14:2.77:0,3,324	0/0:24,0:21:44.75:0,45,591	0/0:10,0:10:21.06:0,21,252	1/1:2,24:26:69.23:966,69,0	1/1:1,17:16:39.13:546,39,0	0/0:30,0:27:75.22:0,75,890	0/0:7,0:7:15.05:0,15,180	0/0:13,0:13:36.10:0,36,423	0/0:8,0:8:24.06:0,24,277	0/0:15,0:15:42.13:0,42,503	0/0:7,0:7:18.06:0,18,216	0/0:7,0:7:18.05:0,18,216	0/0:10,0:10:21.06:0,21,249	1/1:0,14:14:36.12:504,36,0	0/0:30,0:30:82.46:0,82,1003	0/0:21,0:21:57.17:0,57,684	0/0:26,0:26:75.20:0,75,885	0/0:11,0:11:30.09:0,30,360	0/0:15,0:14:33.10:0,33,396	0/0:9,0:9:24.07:0,24,288	0/0:5,0:5:15.05:0,15,180	0/0:24,0:24:62.73:0,63,755	0/0:5,0:5:15.05:0,15,180	0/0:14,0:14:39.11:0,39,452	0/0:18,0:18:48.15:0,48,576	0/0:18,0:18:51.16:0,51,612
chr10	92542713	.	TAATA	T	1869.84	PASS	AB=1.000;AC=21;AF=0.457;AN=46;BaseQRankSum=-6.268;DP=290;FS=14.498;HRun=0;HaplotypeScore=69.6118;InbreedingCoeff=0.7094;MQ=48.96;MQ0=10;MQRankSum=1.827;QD=13.08;ReadPosRankSum=2.875;VQSLOD=1.8964;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:25.85:0,26,403	1/1:4,0:4:11.96:144,12,0	./.	./.	./.	0/0:16,0:16:39.12:0,39,678	0/0:4,0:4:3:0,3,27	0/1:42,0:32:99:173,0,357	1/1:1,3:4:3.01:51,3,0	0/0:10,0:10:15.03:0,15,192	0/0:7,0:7:8.94:0,9,79	0/0:13,0:13:29.97:0,30,398	0/0:6,0:9:15.02:0,15,208	0/0:7,0:7:18.05:0,18,268	1/1:4,0:4:9:101,9,0	0/0:4,0:4:9.03:0,9,164	1/1:5,20:25:33.11:560,33,0	0/0:17,0:17:29.97:0,30,388	1/1:6,9:13:26.93:264,27,0	1/1:11,1:12:3.01:51,3,0	1/1:6,3:9:9.03:153,9,0	0/0:5,0:5:3.01:0,3,56	./.	./.	0/0:10,0:20:17.98:0,18,153	1/1:5,7:12:23.96:246,24,0	1/1:3,7:10:15.05:254,15,0	1/1:2,4:6:3.01:51,3,0
chr10	92542732	.	T	TAAA	1891.77	PASS	AB=0.862;AC=18;AF=0.346;AN=52;BaseQRankSum=1.445;DP=235;FS=2.008;HRun=3;HaplotypeScore=63.2180;InbreedingCoeff=0.3788;MQ=48.26;MQ0=3;MQRankSum=-2.216;QD=19.30;ReadPosRankSum=4.614;VQSLOD=0.8097;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:12:24.08:324,24,0	0/0:4,0:4:12.03:0,12,167	./.	./.	0/0:5,0:5:15.05:0,15,222	1/1:6,9:15:4.07:527,4,0	1/1:2,0:2:3:27,3,0	0/0:39,0:38:89.86:0,90,1217	0/0:4,0:4:6.02:0,6,76	0/1:5,1:6:2.02:144,0,2	0/1:4,1:5:3.24:83,0,3	0/1:9,1:10:14.73:223,0,15	0/1:7,2:9:45.33:131,0,45	1/1:5,1:6:18.03:193,18,0	0/0:5,0:5:14.99:0,15,166	1/1:1,2:3:4.49:113,4,0	0/0:22,0:22:39.11:0,39,450	0/1:15,2:17:99:181,0,118	0/0:17,0:15:45.10:0,45,630	0/0:2,0:2:6:0,6,58	0/0:3,0:3:9.02:0,9,99	1/1:1,0:1:3.01:32,3,0	0/0:2,0:2:5.84:0,6,33	0/0:2,0:2:5.88:0,6,36	0/1:10,2:12:4.71:78,0,5	0/0:11,0:11:24.06:0,24,303	0/0:9,0:9:21.04:0,21,233	0/0:6,0:6:6.02:0,6,77
chr10	92542733	.	T	TA	224.82	PASS	AB=0.819;AC=10;AF=0.185;AN=54;BaseQRankSum=3.126;DP=240;FS=0.759;HRun=2;HaplotypeScore=60.3829;InbreedingCoeff=0.0680;MQ=50.75;MQ0=3;MQRankSum=0.969;QD=2.81;ReadPosRankSum=4.832;VQSLOD=-0.2848;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:10.33:47,10,0	0/0:4,0:4:12.02:0,12,128	./.	0/0:4,0:1:1.55:0,2,4	0/0:5,0:5:15.05:0,15,186	0/1:6,9:15:7.45:180,0,7	0/1:2,0:2:0:0,0,0	0/0:39,0:38:99:0,99,1149	0/0:4,0:4:6.02:0,6,70	0/1:5,0:6:6.44:6,0,54	0/0:4,0:5:11.49:0,11,64	0/1:9,0:10:25.25:25,0,87	0/1:6,0:8:19.19:19,0,56	0/1:5,0:6:10.79:11,0,17	0/0:5,0:5:15.03:0,15,160	0/1:1,2:3:9.65:45,0,10	0/0:22,0:22:42.06:0,42,439	0/1:16,0:18:23.86:24,0,121	0/0:19,0:17:42.13:0,42,512	0/0:2,0:2:6.02:0,6,70	0/0:3,0:3:9.02:0,9,94	0/0:1,0:1:2.96:0,3,19	0/0:2,0:2:5.52:0,6,25	0/0:2,0:2:5.72:0,6,29	0/0:10,0:12:11.58:0,12,83	0/0:11,0:11:21.05:0,21,231	0/0:11,0:11:21.05:0,21,232	0/0:6,0:6:9:0,9,89
chr10	92543166	.	C	CT	19182.01	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-17.043;DP=700;FS=0.000;HRun=1;HaplotypeScore=84.0344;InbreedingCoeff=0.9993;MQ=80.25;MQ0=0;MQRankSum=-3.511;QD=41.25;ReadPosRankSum=2.524;VQSLOD=5.2385;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:99:0,120,1558	0/0:7,0:7:21.07:0,21,260	0/0:20,0:20:57.14:0,57,721	0/0:25,0:25:65.71:0,66,707	1/1:0,15:15:42.14:630,42,0	0/0:20,0:20:60.20:0,60,779	0/0:36,0:36:99:0,105,1348	1/1:0,29:29:87.24:1254,87,0	1/1:3,30:33:81.23:1189,81,0	1/1:0,17:17:51.16:742,51,0	1/1:0,11:11:30.10:450,30,0	1/1:0,38:38:99:1617,108,0	1/1:0,23:23:63.21:944,63,0	1/1:1,24:25:72.24:1061,72,0	0/0:24,0:24:69.22:0,69,855	0/0:27,0:27:81.24:0,81,1025	0/0:32,0:32:90.28:0,90,1115	1/1:0,22:22:60.20:899,60,0	1/1:2,22:24:69.21:1012,69,0	1/1:0,18:18:51.14:740,51,0	1/1:1,48:49:99:2159,144,0	1/1:0,19:19:54.18:809,54,0	1/1:1,15:16:45.15:668,45,0	1/1:1,38:39:99:1619,108,0	1/1:0,15:15:42.14:629,42,0	1/1:1,26:27:75.23:1099,75,0	1/1:1,29:30:72.24:1076,72,0	1/1:0,15:15:39.13:585,39,0
chr10	92543622	.	A	AT	17542.66	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.511;DP=509;FS=7.461;HRun=0;HaplotypeScore=84.6353;InbreedingCoeff=0.9817;MQ=65.86;MQ0=10;MQRankSum=-6.994;QD=36.78;ReadPosRankSum=4.867;VQSLOD=4.5405;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:27:42.14:656,42,0	1/1:2,8:10:30.08:451,30,0	0/0:17,0:16:48.14:0,48,626	0/0:15,0:14:42.11:0,42,567	1/1:1,18:19:48.09:737,48,0	1/1:1,23:23:66.23:1055,66,0	1/1:0,13:13:33.11:527,33,0	1/1:0,21:21:63.18:936,63,0	1/1:2,14:14:39.13:623,39,0	1/1:2,17:19:57.11:878,57,0	1/1:1,11:11:24.08:381,24,0	1/1:2,20:20:42.14:658,42,0	1/1:4,15:17:33.11:524,33,0	1/1:2,10:11:24.08:371,24,0	1/1:2,25:24:63.21:1003,63,0	1/1:1,25:25:69.24:1103,69,0	1/1:5,19:20:45.15:712,45,0	1/1:3,5:8:18.06:276,18,0	1/1:0,7:7:18.06:288,18,0	1/1:0,22:22:63.21:1007,63,0	1/1:0,29:29:81.28:1291,81,0	1/1:1,13:13:30.10:477,30,0	1/1:2,14:14:24.08:382,24,0	1/1:0,16:15:18.06:286,18,0	1/1:1,12:13:36.12:540,36,0	1/1:1,24:24:69.15:1043,69,0	1/1:0,28:28:63.13:1004,63,0	1/1:1,7:7:21.07:336,21,0
chr10	92543631	.	GT	G	5461.63	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=15.341;DP=498;FS=1.257;HRun=2;HaplotypeScore=120.9692;InbreedingCoeff=0.9911;MQ=57.83;MQ0=16;MQRankSum=-14.385;QD=24.17;ReadPosRankSum=1.160;VQSLOD=4.7063;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:23:39.13:500,39,0	1/1:1,10:10:27.09:347,27,0	0/0:11,0:10:27.08:0,27,372	0/0:15,0:13:27.06:0,27,380	0/0:21,0:21:60.16:0,60,874	0/0:23,0:22:63.16:0,63,884	0/0:15,0:15:42.13:0,42,603	0/0:18,0:18:51.14:0,51,736	0/0:19,0:16:39.13:0,39,584	1/1:0,18:18:54.18:699,54,0	1/1:1,10:10:21.06:257,21,0	1/1:3,21:22:33.11:427,33,0	1/1:3,17:18:39.13:504,39,0	1/1:1,14:13:24.08:306,24,0	1/1:2,21:20:57.17:723,57,0	0/0:28,0:26:72.23:0,72,1037	1/1:5,13:14:30.06:356,30,0	1/1:1,7:8:18.02:214,18,0	0/0:12,0:10:30.06:0,30,421	0/0:22,0:21:60.19:0,60,880	0/0:30,0:27:72.24:0,72,1078	1/1:0,16:15:27.09:342,27,0	1/1:1,15:14:20.74:243,21,0	1/1:2,12:12:18.06:233,18,0	1/1:0,9:9:24.08:310,24,0	0/0:27,1:27:39.40:0,39,1059	0/0:25,0:24:63.17:0,63,923	0/0:5,0:4:12.01:0,12,156
chr10	92543707	.	C	CG	5247.44	PASS	AB=0.571;AC=29;AF=0.558;AN=52;BaseQRankSum=-0.933;DP=342;FS=0.000;HRun=1;HaplotypeScore=61.7989;InbreedingCoeff=0.9090;MQ=32.54;MQ0=25;MQRankSum=-4.799;QD=28.83;ReadPosRankSum=0.363;VQSLOD=4.4097;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:14:32.93:409,33,0	1/1:2,6:8:23.97:301,24,0	./.	./.	0/0:14,0:13:24.01:0,24,287	0/0:7,0:6:15.02:0,15,152	0/0:16,0:15:35.95:0,36,388	1/1:2,13:14:42.10:598,42,0	0/0:13,0:10:27.07:0,27,334	1/1:2,8:10:27.06:376,27,0	1/1:1,10:10:30.02:414,30,0	1/1:6,14:18:39.09:552,39,0	1/1:2,10:10:24.01:324,24,0	1/1:3,9:10:23.96:302,24,0	1/1:8,7:12:18.06:267,18,0	0/0:13,0:11:27.06:0,27,320	1/1:6,6:9:20.97:261,21,0	0/1:2,6:6:3.95:204,0,4	0/0:11,0:10:23.84:0,24,246	0/0:22,0:21:54.11:0,54,645	0/0:16,0:13:29.61:0,30,300	1/1:2,6:7:14.97:194,15,0	1/1:1,12:12:32.94:432,33,0	1/1:5,2:3:3.01:44,3,0	1/1:2,15:16:42.01:568,42,0	0/0:15,0:13:39.06:0,39,445	0/0:13,0:12:24.03:0,24,253	0/0:18,0:14:23.93:0,24,266
chr10	92544311	.	C	CT	4148.19	PASS	AB=0.619;AC=26;AF=0.464;AN=56;BaseQRankSum=-2.508;DP=502;FS=4.473;HRun=8;HaplotypeScore=88.1992;InbreedingCoeff=0.8266;MQ=57.28;MQ0=7;MQRankSum=2.991;QD=20.24;ReadPosRankSum=1.816;VQSLOD=3.7675;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:86.99:0,87,784	1/1:0,3:3:9.03:104,9,0	0/0:26,0:13:19.94:0,20,169	0/0:23,1:10:10.27:0,10,101	1/1:4,10:15:20.96:223,21,0	1/1:3,22:25:54.13:609,54,0	0/1:9,11:19:12.62:342,0,13	0/0:41,0:40:86.82:0,87,792	1/1:3,6:9:18.05:207,18,0	0/0:19,0:19:39.02:0,39,357	0/0:15,0:15:27:0,27,247	0/0:15,0:15:26.99:0,27,247	0/0:14,0:13:18:0,18,165	0/0:8,0:7:12:0,12,110	1/1:3,10:12:24.07:277,24,0	1/1:1,12:13:27.08:312,27,0	1/1:4,22:25:45.13:516,45,0	0/0:26,0:22:47.98:0,48,431	1/1:4,7:12:23.86:231,24,0	1/1:4,15:18:8.65:304,9,0	1/1:2,7:9:12.03:137,12,0	0/0:11,0:11:30.02:0,30,275	0/0:17,0:17:39.01:0,39,356	0/0:20,0:21:53.04:0,53,466	0/0:17,0:17:38.99:0,39,351	0/1:5,10:16:11.67:278,0,12	1/1:0,15:14:39.07:435,39,0	1/1:3,6:10:15.04:173,15,0
chr10	92544457	.	A	ACTTC	14478.59	PASS	AB=0.733;AC=43;AF=0.768;AN=56;BaseQRankSum=14.556;DP=378;FS=3.708;HRun=0;HaplotypeScore=167.5449;InbreedingCoeff=0.6851;MQ=80.89;MQ0=0;MQRankSum=-14.664;QD=53.82;ReadPosRankSum=5.458;VQSLOD=5.3939;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,8:19:1.43:856,1,0	0/1:10,1:11:36.38:36,0,564	0/0:15,0:15:45.13:0,45,787	0/0:18,0:18:51.18:0,51,1015	1/1:15,0:15:45.15:875,45,0	1/1:12,0:12:33.11:617,33,0	1/1:7,0:7:14.98:240,15,0	0/0:40,0:40:99:0,111,2200	1/1:10,0:10:30.10:630,30,0	1/1:8,13:21:30.68:1230,31,0	1/1:6,16:22:63.22:1410,63,0	0/1:8,7:15:1.13:776,0,1	0/1:2,4:6:4.96:260,0,5	1/1:2,7:9:27.09:605,27,0	0/0:10,0:9:24.07:0,24,430	1/1:8,0:8:21.07:442,21,0	0/0:26,0:26:75.26:0,75,1498	1/1:6,7:10:27.09:660,27,0	1/1:8,0:8:21.04:443,21,0	1/1:20,0:20:60.21:1179,60,0	1/1:5,0:5:6.02:145,6,0	1/1:5,11:16:45.02:1014,45,0	1/1:3,9:12:36.12:839,36,0	1/1:1,4:5:12.03:222,12,0	1/1:4,6:10:30.06:623,30,0	1/1:11,0:10:30.09:571,30,0	1/1:11,0:11:33.07:634,33,0	1/1:3,0:3:9.03:173,9,0
chr10	92544458	.	C	CTTCCATTAAAAA	42039.02	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=2.207;DP=425;FS=11.779;HRun=0;HaplotypeScore=141.7881;InbreedingCoeff=0.8607;MQ=78.80;MQ0=0;MQRankSum=-14.309;QD=132.62;ReadPosRankSum=2.534;VQSLOD=5.2580;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:36.10:1696,36,0	0/1:11,0:11:99:157,0,1077	0/0:16,0:16:45.13:0,45,1246	0/0:17,0:18:51.18:0,51,1956	1/1:4,14:18:54.18:3064,54,0	1/1:7,8:18:42.14:2394,42,0	1/1:6,2:9:21.07:950,21,0	0/0:38,0:38:99:0,111,4107	1/1:3,8:14:33.11:2009,33,0	1/1:22,0:22:63.19:3297,63,0	1/1:21,0:21:63.22:3497,63,0	1/1:16,0:16:48.15:2078,48,0	1/1:7,0:7:21.04:877,21,0	1/1:11,0:10:30.10:1849,30,0	0/0:10,0:9:24.07:0,24,737	1/1:4,4:11:14.63:951,15,0	0/0:26,0:26:75.26:0,75,2969	1/1:10,0:8:24.04:1087,24,0	1/1:3,3:7:18.03:886,18,0	1/1:5,18:26:78.16:4076,78,0	1/1:3,1:7:9.03:326,9,0	1/1:20,0:20:60.20:2830,60,0	1/1:15,0:15:42.14:2270,42,0	1/1:9,0:9:21.06:713,21,0	1/1:13,0:13:39.13:1998,39,0	1/1:6,7:15:45.13:2214,45,0	1/1:5,8:13:39.13:2148,39,0	1/1:1,3:6:12.04:673,12,0
chr10	92544461	.	T	TAAAAAATG	25014.40	PASS	AB=0.986;AC=40;AF=0.714;AN=56;BaseQRankSum=14.434;DP=423;FS=9.203;HRun=0;HaplotypeScore=171.1308;InbreedingCoeff=0.5120;MQ=77.95;MQ0=0;MQRankSum=-14.603;QD=79.66;ReadPosRankSum=4.480;VQSLOD=4.7137;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:16:39.11:1093,39,0	0/1:10,1:11:91.16:91,0,823	0/0:15,0:15:21.13:0,21,914	0/0:18,0:18:54.16:0,54,1399	1/1:19,0:19:54.07:1403,54,0	0/1:18,0:18:5.83:1070,0,6	0/1:8,0:8:1.92:447,0,2	0/0:39,0:39:99:0,114,3120	1/1:15,0:15:11.25:882,11,0	1/1:8,13:21:57.18:2233,57,0	1/1:4,16:21:63.22:2403,63,0	1/1:8,7:15:45.15:1627,45,0	1/1:3,4:7:21.07:675,21,0	1/1:3,8:10:30.10:1208,30,0	0/0:9,0:8:21.07:0,21,585	0/1:10,0:10:50.91:409,0,51	0/0:28,0:28:81.25:0,81,2271	1/1:3,7:8:24.08:819,24,0	0/1:8,0:8:8.74:416,0,9	1/1:26,0:26:70.08:1838,70,0	0/1:7,0:7:26.81:252,0,27	1/1:9,11:20:60.21:2128,60,0	1/1:6,9:15:42.14:1569,42,0	1/1:4,4:8:18.06:535,18,0	1/1:8,6:14:42.13:1476,42,0	1/1:15,0:14:39.61:1071,40,0	1/1:13,0:13:39.13:1033,39,0	1/1:6,0:6:12.04:337,12,0
chr10	92546348	.	A	AG	902.67	PASS	AB=0.816;AC=15;AF=0.288;AN=52;BaseQRankSum=0.371;DP=371;FS=2.857;HRun=10;HaplotypeScore=62.2099;InbreedingCoeff=0.2791;MQ=75.09;MQ0=1;MQRankSum=-1.707;QD=6.40;ReadPosRankSum=0.857;VQSLOD=1.3334;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:64.83:427,65,0	0/1:4,0:5:1.35:2,0,1	0/0:17,0:12:17.84:0,18,134	0/0:17,0:16:1.01:0,1,72	./.	0/1:7,0:10:19.82:20,0,44	0/1:14,14:28:42.52:122,0,43	0/0:18,0:18:14.81:0,15,107	0/1:4,0:4:16.40:25,0,16	0/0:4,0:5:7.45:0,7,45	0/0:6,0:6:5.97:0,6,46	0/0:19,0:19:17:0,17,143	0/0:14,0:16:20.80:0,21,149	0/0:16,0:16:19.03:0,19,119	0/0:20,0:20:10.55:0,11,97	0/1:4,6:10:1.01:26,0,1	0/0:21,0:22:8.27:0,8,125	0/0:23,0:23:18.47:0,18,260	1/1:2,0:2:2.37:8,2,0	./.	0/1:24,3:26:22:185,0,22	0/0:14,0:14:18.18:0,18,129	0/0:2,0:3:5.03:0,5,30	0/0:14,0:14:12.88:0,13,168	0/0:11,0:11:17.07:0,17,115	0/1:4,7:11:11.37:79,0,11	1/1:5,2:7:3.01:32,3,0	1/1:4,4:8:12.92:129,13,0
chr10	92546353	.	G	GA	842.10	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-2.286;DP=374;FS=22.445;HRun=0;HaplotypeScore=57.9774;InbreedingCoeff=0.2826;MQ=70.78;MQ0=1;MQRankSum=-1.444;QD=15.59;ReadPosRankSum=6.257;VQSLOD=2.7084;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:69.16:930,69,0	0/0:4,0:4:11.73:0,12,74	0/0:16,0:11:23.79:0,24,265	0/0:17,0:16:20.92:0,21,301	0/0:7,0:7:3:0,3,25	0/0:12,0:12:23.20:0,23,232	0/0:31,0:31:29.03:0,29,412	0/0:19,0:19:35.99:0,36,374	0/0:4,0:4:9.28:0,9,81	0/0:8,0:8:15.02:0,15,170	0/0:6,0:6:14.84:0,15,145	0/0:20,0:20:54.03:0,54,571	0/0:19,0:19:53.93:0,54,533	0/0:15,0:15:45:0,45,465	0/0:17,0:17:50.92:0,51,503	0/1:8,0:8:3.25:3,0,51	0/0:19,0:19:50.82:0,51,505	0/0:22,0:22:59.29:0,59,712	0/0:3,0:3:8.74:0,9,62	0/0:4,0:4:2.92:0,3,17	0/0:29,0:28:30.82:0,31,355	0/0:14,0:14:38.47:0,38,378	0/0:4,0:4:5.97:0,6,61	0/0:12,0:12:35.47:0,35,425	0/0:11,0:11:26.99:0,27,297	0/1:10,0:10:7.14:7,0,52	0/0:7,0:7:7.34:0,7,96	0/1:6,0:6:12.48:12,0,13
chr10	92546527	.	T	TG	3856.02	PASS	AB=0.898;AC=23;AF=0.426;AN=54;BaseQRankSum=-8.084;DP=420;FS=2.121;HRun=8;HaplotypeScore=86.5609;InbreedingCoeff=0.5060;MQ=81.79;MQ0=0;MQRankSum=-2.730;QD=16.13;ReadPosRankSum=4.257;VQSLOD=3.8423;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:2.58:0,3,15	0/1:7,0:7:0:0,0,0	0/0:10,0:10:23.94:0,24,211	0/0:16,0:15:20.96:0,21,183	0/0:5,0:5:2.84:0,3,14	0/0:7,0:7:0.31:0,0,1	0/0:21,0:21:6.40:0,6,14	0/0:19,0:19:48.02:0,48,436	0/0:11,0:11:3.15:0,3,16	1/1:9,9:18:18.05:205,18,0	1/1:1,8:9:18.02:207,18,0	1/1:4,29:33:78.70:901,79,0	1/1:4,12:16:21.06:242,21,0	0/1:3,7:10:30.86:175,0,31	0/0:10,0:10:3.74:0,4,9	0/0:17,0:17:5.32:0,5,16	0/1:22,0:22:6.75:7,0,20	1/1:4,23:27:35.72:664,36,0	0/0:8,0:8:2.80:0,3,14	./.	0/0:21,1:22:1.92:0,2,19	1/1:5,8:13:21.06:241,21,0	1/1:9,5:14:15.04:173,15,0	1/1:6,21:27:60.15:679,60,0	1/1:5,9:14:30.08:336,30,0	0/1:16,2:18:22.84:25,0,23	0/0:12,0:12:0.90:0,1,2	0/1:11,0:11:0:1,0,0
chr10	92546534	.	GGA	G	1542.72	PASS	AB=1.000;AC=21;AF=0.389;AN=54;BaseQRankSum=-2.550;DP=386;FS=0.000;HRun=0;HaplotypeScore=66.2504;InbreedingCoeff=0.5457;MQ=82.15;MQ0=0;MQRankSum=-1.629;QD=8.87;ReadPosRankSum=-3.980;VQSLOD=2.4884;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:49.92:79,0,50	1/1:5,0:5:2.98:21,3,0	0/0:12,0:12:35.95:0,36,496	0/0:13,0:12:33.02:0,33,451	0/0:1,0:1:2.94:0,3,18	1/1:8,0:8:7.59:39,8,0	1/1:24,2:26:24.19:155,24,0	0/0:23,0:23:69.18:0,69,991	0/1:6,0:6:15.48:15,0,27	0/0:10,0:10:20.72:0,21,185	0/0:9,0:9:20.60:0,21,186	0/0:34,0:34:90.55:0,91,833	0/0:16,0:16:32.84:0,33,305	0/0:12,0:12:30.03:0,30,327	1/1:10,1:11:21.05:178,21,0	1/1:11,5:16:35.66:358,36,0	1/1:17,4:21:53.47:495,53,0	0/0:27,0:27:69.04:0,69,664	0/1:6,0:6:22.02:30,0,22	./.	1/1:26,0:26:22.80:285,23,0	0/0:10,0:10:17.69:0,18,160	0/0:6,0:6:15.45:0,15,130	0/0:25,0:25:66.05:0,66,623	0/0:13,0:13:38.71:0,39,365	0/1:15,0:15:38.39:38,0,82	1/1:9,0:9:4.20:38,4,0	0/1:9,0:9:2:2,0,43
chr10	92546535	.	GA	G	2431.66	PASS	AB=0.765;AC=25;AF=0.463;AN=54;BaseQRankSum=-5.862;DP=377;FS=8.643;HRun=1;HaplotypeScore=56.3904;InbreedingCoeff=0.8034;MQ=82.69;MQ0=0;MQRankSum=-3.071;QD=14.39;ReadPosRankSum=-5.460;VQSLOD=0.5132;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:18.26:156,18,0	1/1:0,3:3:2.98:21,3,0	0/0:12,0:12:35.93:0,36,387	0/0:12,1:12:32.87:0,33,345	0/0:1,0:1:1.25:0,1,3	1/1:0,7:7:8.43:102,8,0	1/1:2,22:24:26.98:330,27,0	0/0:23,0:23:69.15:0,69,803	1/1:6,0:6:3.76:47,4,0	0/0:8,0:8:15.69:0,16,98	0/0:10,0:10:20.01:0,20,109	0/0:35,0:35:87.24:0,87,511	0/0:16,0:16:27.21:0,27,189	0/0:10,0:10:29.39:0,29,229	1/1:8,3:11:23.86:205,24,0	1/1:13,3:16:38.74:325,39,0	1/1:13,8:21:62.52:566,63,0	0/0:26,0:26:66.99:0,67,406	1/1:5,1:6:8.77:58,9,0	./.	1/1:26,1:27:56.85:481,57,0	0/0:9,0:9:4.85:0,5,71	0/0:6,0:6:13.34:0,13,64	0/0:25,0:25:66.98:0,67,396	0/0:13,0:13:34.75:0,35,229	0/1:9,4:13:29.04:109,0,29	1/1:7,2:9:14.92:146,15,0	1/1:9,0:9:13.14:90,13,0
chr10	92547340	.	GCTGGGC	G	1965.31	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.917;DP=857;FS=0.000;HRun=0;HaplotypeScore=201.3344;InbreedingCoeff=0.9989;MQ=79.16;MQ0=0;MQRankSum=-6.325;QD=72.79;ReadPosRankSum=-2.101;VQSLOD=3.2244;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,5012	0/0:9,0:9:27.09:0,27,948	0/0:15,0:15:42.14:0,42,1382	0/0:27,0:27:73.98:0,74,2184	0/0:23,0:23:69.24:0,69,2261	0/0:18,0:18:54.19:0,54,1943	0/0:39,0:39:99:0,114,4040	1/1:0,27:27:81.28:2060,81,0	0/0:23,0:23:69.24:0,69,2462	0/0:26,0:26:78.27:0,78,2906	0/0:18,0:18:48.16:0,48,1711	0/0:56,0:56:99:0,169,5911	0/0:43,0:43:99:0,126,4349	0/0:30,0:30:87.30:0,87,2981	0/0:34,0:34:99:0,102,3588	0/0:32,0:32:96.33:0,96,3401	0/0:35,0:35:99:0,105,3581	0/0:32,0:32:96.30:0,96,3313	0/0:26,0:26:78.24:0,78,2708	0/0:28,0:28:81.28:0,81,2828	0/0:68,0:68:99:0,205,7488	0/0:25,0:25:75.26:0,75,2763	0/0:18,0:18:54.19:0,54,2011	0/0:48,0:48:99:0,144,5361	0/0:23,0:23:66.23:0,66,2419	0/0:37,0:37:99:0,111,4004	0/0:22,0:22:66.23:0,66,2374	0/0:29,0:29:87.30:0,87,3217
chr10	92548770	.	A	AGTGTGTGTGT	1486.44	PASS	AB=0.917;AC=14;AF=0.292;AN=48;BaseQRankSum=-4.991;DP=301;FS=5.678;HRun=0;HaplotypeScore=98.2565;InbreedingCoeff=0.3044;MQ=69.32;MQ0=12;MQRankSum=0.948;QD=14.02;ReadPosRankSum=1.053;VQSLOD=1.0821;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:33.11:0,33,895	0/0:0,0:6:5.74:0,6,126	./.	./.	./.	0/0:4,0:4:6:0,6,72	0/1:12,0:12:12.47:12,0,132	0/0:25,0:25:26.66:0,27,325	1/1:1,4:5:3.01:92,3,0	0/0:7,0:7:9.50:0,10,181	0/0:5,0:5:3.01:0,3,69	0/0:17,0:17:20.99:0,21,488	0/0:5,0:4:6.02:0,6,139	0/1:9,0:8:14.41:14,0,64	0/0:5,0:4:3.01:0,3,96	0/0:1,0:1:3.01:0,3,73	0/1:9,0:14:3.47:3,0,119	0/0:15,0:15:11.46:0,11,247	1/1:7,0:10:13.86:382,14,0	0/0:2,3:5:0.47:0,0,1	1/1:29,0:28:8.98:105,9,0	./.	0/0:6,0:7:2.79:0,3,60	0/0:17,0:16:6.02:0,6,119	0/0:6,0:6:9.03:0,9,153	0/1:7,6:15:59.96:750,0,60	1/1:2,1:6:6.02:229,6,0	1/1:2,0:5:3.01:42,3,0
chr10	92548798	.	TGTGTGTGTGCGCGC	T	3188.95	PASS	AB=0.843;AC=21;AF=0.389;AN=54;BaseQRankSum=6.273;DP=315;FS=26.327;HRun=0;HaplotypeScore=83.6684;InbreedingCoeff=0.4425;MQ=45.89;MQ0=11;MQRankSum=-4.295;QD=22.62;ReadPosRankSum=5.792;VQSLOD=-0.0253;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:39.13:0,39,1471	0/1:7,0:7:18.36:18,0,19	0/0:6,0:1:3.01:0,3,45	0/0:5,0:2:5.23:0,5,95	0/0:6,0:6:3.01:0,3,36	0/0:6,0:6:6.02:0,6,290	0/0:17,0:17:21.07:0,21,788	0/0:23,0:23:60.10:0,60,1340	0/0:7,0:7:6.02:0,6,127	1/1:0,5:5:15.05:435,15,0	1/1:0,3:3:3.01:113,3,0	1/1:6,15:20:27.09:1069,27,0	1/1:1,7:7:6.02:244,6,0	0/1:2,5:6:61.55:123,0,62	1/1:5,0:4:3.01:51,3,0	0/0:2,0:1:3.01:0,3,115	0/0:14,0:14:1.96:0,2,363	1/1:8,18:26:11.87:430,12,0	0/0:9,0:9:24.08:0,24,716	0/0:5,0:5:3:0,3,25	0/0:28,0:27:33.08:0,33,780	./.	1/1:1,5:6:3.01:129,3,0	1/1:8,19:26:9.03:263,9,0	1/1:1,7:8:9.03:367,9,0	0/1:16,1:16:99:120,0,1266	0/0:6,0:6:9.03:0,9,396	0/0:3,0:3:3.01:0,3,139
chr10	92548806	.	TGC	T	312.42	PASS	AB=1.000;AC=23;AF=0.479;AN=48;BaseQRankSum=5.412;DP=292;FS=10.923;HRun=0;HaplotypeScore=56.9329;InbreedingCoeff=0.4449;MQ=53.27;MQ0=8;MQRankSum=-2.794;QD=1.94;ReadPosRankSum=4.941;VQSLOD=0.0813;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,23:31:14.26:153,14,0	0/0:7,0:7:3.37:0,3,8	1/1:4,0:1:2.04:6,2,0	./.	0/0:4,0:7:4.55:0,5,28	0/0:1,0:6:3:0,3,27	0/0:7,0:19:8.97:0,9,72	0/0:20,0:20:14.94:0,15,121	0/1:8,0:8:16.80:17,0,19	0/1:5,0:5:0.65:20,0,1	1/1:3,0:3:0.47:1,0,0	1/1:18,0:18:23.62:115,24,0	1/1:7,0:7:3.73:16,4,0	1/1:7,0:6:2.84:14,3,0	./.	0/0:3,0:2:3:0,3,25	0/1:15,0:15:6.73:7,0,68	1/1:24,0:23:8.99:43,9,0	0/0:8,0:7:16.49:0,16,110	./.	0/0:24,0:23:11.85:0,12,81	./.	1/1:6,0:6:2.84:14,3,0	1/1:23,0:22:2.32:16,2,0	1/1:8,0:8:8.52:42,9,0	0/0:15,0:15:13.91:0,14,174	0/0:6,0:6:4.81:0,5,30	0/0:1,0:1:1.25:0,1,3
chr10	92551735	.	TTCCCGCCTCTACTCTGCCCCCC	T	4620.31	PASS	AB=0.558;AC=5;AF=0.089;AN=56;BaseQRankSum=8.276;DP=402;FS=0.741;HRun=0;HaplotypeScore=212.8383;InbreedingCoeff=0.6387;MQ=78.83;MQ0=0;MQRankSum=-8.057;QD=77.01;ReadPosRankSum=3.965;VQSLOD=4.5451;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:36.08:0,36,2715	0/0:8,0:8:20.68:0,21,1968	0/0:6,0:6:9.02:0,9,375	0/0:18,0:17:35.38:0,35,1831	0/0:7,0:7:18.06:0,18,1628	1/1:3,13:16:18.06:1090,18,0	1/1:6,14:20:18.06:1031,18,0	0/0:18,0:18:45.09:0,45,2035	0/0:13,0:13:39.13:0,39,2862	0/0:5,0:5:12.04:0,12,942	0/0:6,0:6:15.05:0,15,1240	0/0:22,0:22:63.20:0,63,4981	0/0:12,0:12:36.12:0,36,3189	0/0:19,0:19:54.16:0,54,3907	0/0:15,0:15:39.13:0,39,3219	0/1:5,19:24:99:2499,0,268	0/0:23,0:23:63.19:0,63,5451	0/0:11,0:11:33.11:0,33,2932	0/0:15,0:15:33.11:0,33,2313	0/0:3,0:3:3.92:0,4,422	0/0:25,0:25:72.25:0,72,6600	0/0:10,0:10:27.09:0,27,2108	0/0:5,0:5:3.01:0,3,45	0/0:22,0:22:63.22:0,63,5731	0/0:11,0:11:27.09:0,27,2427	0/0:11,0:11:27.09:0,27,2404	0/0:29,0:29:78.27:0,78,7021	0/0:11,0:11:33.11:0,33,2882
chr10	92552233	.	GC	G	2594.05	PASS	AB=0.852;AC=32;AF=0.571;AN=56;BaseQRankSum=3.618;DP=405;FS=15.934;HRun=11;HaplotypeScore=50.5369;InbreedingCoeff=0.1951;MQ=77.18;MQ0=0;MQRankSum=1.136;QD=7.91;ReadPosRankSum=2.505;VQSLOD=0.5867;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:28,5:33:75.14:75,0,280	1/1:2,0:2:2.99:24,3,0	0/1:15,2:17:22.89:23,0,86	0/1:12,1:11:13.90:14,0,54	1/1:5,9:14:23.95:197,24,0	0/0:2,0:6:8.84:0,9,70	0/1:9,2:24:13.94:14,0,180	1/1:7,11:20:5.03:223,5,0	1/1:3,10:13:0.01:195,0,0	0/0:8,0:8:12.01:0,12,128	0/1:5,2:7:31.23:31,0,110	0/0:22,1:23:14.43:0,14,348	0/1:9,2:11:31.20:31,0,110	0/1:10,1:11:3.59:4,0,171	1/1:2,9:13:25.04:184,25,0	0/0:5,0:7:14.83:0,15,120	1/1:8,19:27:50.92:419,51,0	0/0:14,1:15:8.38:0,8,280	1/1:5,4:10:11.02:80,11,0	1/1:3,7:10:17.97:148,18,0	1/1:8,17:26:18.08:343,18,0	0/0:10,1:11:23.87:0,24,229	0/1:15,2:17:22.23:22,0,190	0/1:15,2:17:16.10:16,0,255	0/0:7,0:7:12.02:0,12,122	0/1:5,13:19:10.84:270,0,11	1/1:3,16:19:41.74:344,42,0	1/1:0,5:5:14.98:123,15,0
chr10	92554362	.	AC	A	18090.39	PASS	AB=0.929;AC=35;AF=0.625;AN=56;BaseQRankSum=16.306;DP=734;FS=6.721;HRun=1;HaplotypeScore=94.4286;InbreedingCoeff=0.9396;MQ=79.57;MQ0=0;MQRankSum=-2.733;QD=37.07;ReadPosRankSum=2.680;VQSLOD=5.1091;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:99:0,144,2246	1/1:0,9:9:24.08:336,24,0	0/0:15,0:15:45.12:0,45,690	0/0:19,0:19:51.17:0,51,780	0/0:20,0:20:60.19:0,60,935	1/1:0,25:25:63.21:881,63,0	1/1:0,24:24:72.24:1007,72,0	1/1:0,22:22:66.21:903,66,0	0/0:26,0:26:75.21:0,75,1170	1/1:0,22:22:66.22:921,66,0	1/1:0,21:21:57.19:797,57,0	1/1:0,38:38:99:1468,105,0	1/1:0,24:24:66.22:922,66,0	1/1:0,34:34:99:1384,99,0	1/1:0,20:20:54.18:755,54,0	1/1:1,40:41:75.50:1629,76,0	1/1:0,34:34:96.32:1342,96,0	1/1:0,32:32:90.30:1259,90,0	0/0:20,0:20:60.20:0,60,956	0/0:18,0:18:54.18:0,54,862	0/0:45,0:45:99:0,135,2132	1/1:0,21:21:60.20:839,60,0	1/1:1,34:35:96.32:1335,96,0	1/1:0,32:32:90.30:1259,90,0	1/1:0,28:28:75.25:1049,75,0	0/1:24,2:26:5.72:6,0,1035	0/0:27,0:27:72.24:0,72,1136	0/0:8,0:8:24.08:0,24,383
chr10	92554539	.	TG	T	3184.98	PASS	AB=0.828;AC=41;AF=0.732;AN=56;BaseQRankSum=-0.219;DP=559;FS=22.172;HRun=12;HaplotypeScore=78.8618;InbreedingCoeff=0.6138;MQ=68.45;MQ0=0;MQRankSum=-1.886;QD=6.95;ReadPosRankSum=6.301;VQSLOD=0.3692;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:23.47:0,23,143	1/1:2,2:4:5.97:46,6,0	0/0:12,0:13:14.69:0,15,166	0/0:12,0:9:6.01:0,6,56	1/1:13,9:22:9.98:82,10,0	0/0:13,0:14:3.52:0,4,42	0/0:23,0:25:35.43:0,35,287	0/0:13,0:13:5.99:0,6,53	1/1:10,13:23:4.37:204,4,0	1/1:9,7:17:19.81:132,20,0	1/1:2,1:3:2.98:23,3,0	1/1:19,6:26:19.86:201,20,0	1/1:13,13:26:19.66:178,20,0	1/1:15,18:34:45.68:335,46,0	1/1:15,13:28:44.45:326,44,0	0/1:23,0:30:2.45:2,0,129	0/1:21,8:29:3.98:147,0,4	1/1:11,17:30:39.92:290,40,0	1/1:14,2:19:17.38:98,17,0	1/1:9,6:15:8.86:67,9,0	0/1:18,11:30:9.89:118,0,10	1/1:9,10:21:27.88:195,28,0	1/1:5,7:12:9.44:71,9,0	1/1:12,10:23:39.12:287,39,0	1/1:6,6:12:8.96:69,9,0	1/1:14,10:28:41.24:259,41,0	1/1:11,5:16:14.94:116,15,0	1/1:4,5:9:14.90:114,15,0
chr10	92554571	.	GTCTT	G	2619.21	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.464;DP=528;FS=1.142;HRun=0;HaplotypeScore=107.9835;InbreedingCoeff=0.9467;MQ=85.31;MQ0=0;MQRankSum=-7.789;QD=45.16;ReadPosRankSum=3.209;VQSLOD=4.4189;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.19:0,54,1333	1/1:1,3:4:9.03:163,9,0	0/0:20,0:20:45.15:0,45,1177	0/0:24,0:22:63.22:0,63,1508	0/0:15,0:15:42.11:0,42,1001	0/0:17,0:17:48.13:0,48,1198	0/0:28,0:28:81.28:0,81,2079	0/0:22,0:22:60.20:0,60,1498	0/0:22,0:22:57.20:0,57,1491	0/0:11,0:11:27.09:0,27,706	0/0:3,0:3:9.03:0,9,236	0/0:22,0:22:63.22:0,63,1598	0/0:22,0:22:48.16:0,48,1245	0/0:28,0:28:78.27:0,78,1951	1/1:2,25:27:72.25:1286,72,0	0/0:19,0:19:48.16:0,48,1180	1/1:0,27:27:72.25:1307,72,0	0/0:25,0:25:50.77:0,51,1291	0/0:23,0:23:63.69:0,64,1593	0/0:18,0:18:51.18:0,51,1311	0/0:26,0:26:66.23:0,66,1727	0/0:12,0:12:33.58:0,34,863	0/0:12,0:12:24.05:0,24,580	0/0:26,0:26:78.27:0,78,2027	0/0:8,0:8:12.04:0,12,314	0/0:20,0:20:57.20:0,57,1487	0/0:16,0:16:36.12:0,36,941	0/0:11,0:11:33.11:0,33,864
chr10	92555391	.	CTGA	C	9775.97	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=18.279;DP=647;FS=9.431;HRun=0;HaplotypeScore=113.9897;InbreedingCoeff=0.9998;MQ=92.40;MQ0=2;MQRankSum=-7.033;QD=45.90;ReadPosRankSum=5.040;VQSLOD=6.7696;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,3065	0/0:9,0:9:27.09:0,27,666	0/0:29,0:29:84.27:0,84,1920	0/0:28,0:28:76.09:0,76,1774	0/0:22,0:22:66.23:0,66,1613	0/0:21,0:21:63.22:0,63,1553	0/0:24,0:24:72.25:0,72,1766	0/0:31,0:31:93.32:0,93,2240	0/0:20,0:20:60.21:0,60,1466	1/1:0,20:20:60.21:1058,60,0	1/1:1,16:17:39.13:691,39,0	1/1:1,28:28:81.28:1417,81,0	1/1:0,15:15:42.14:741,42,0	1/1:0,30:30:81.28:1427,81,0	0/0:27,0:27:81.28:0,81,1947	0/0:29,0:29:84.29:0,84,2071	0/0:24,0:24:72.25:0,72,1775	1/1:0,25:25:69.24:1217,69,0	0/0:11,0:11:33.11:0,33,799	0/0:19,0:19:54.19:0,54,1286	0/0:24,0:24:72.25:0,72,1750	1/1:1,16:17:45.15:794,45,0	1/1:0,16:16:45.15:793,45,0	1/1:1,22:21:38.56:688,39,0	1/1:0,21:21:54.18:950,54,0	0/0:27,0:27:78.27:0,78,1897	0/0:32,0:32:96.33:0,96,2348	0/0:15,0:15:45.15:0,45,1094
chr10	92556184	.	A	ATCTGAGGCC	7116.62	PASS	AB=0.700;AC=5;AF=0.089;AN=56;BaseQRankSum=-4.855;DP=736;FS=4.877;HRun=0;HaplotypeScore=209.0341;InbreedingCoeff=0.7801;MQ=81.11;MQ0=0;MQRankSum=-12.220;QD=106.22;ReadPosRankSum=0.077;VQSLOD=5.0393;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,157,4533	0/1:4,3:7:72.87:541,0,73	0/0:22,0:22:54.16:0,54,1342	0/0:22,0:22:48.14:0,48,1223	0/0:15,0:15:39.12:0,39,1067	0/0:22,0:22:66.17:0,66,1711	0/0:37,0:37:99:0,108,3185	0/0:21,0:21:48.16:0,48,1435	0/0:24,0:24:66.23:0,66,1932	0/0:30,0:30:90.31:0,90,2552	0/0:15,0:15:45.11:0,45,1278	0/0:40,0:40:99:0,120,3475	0/0:24,0:24:72.22:0,72,2049	0/0:23,0:23:63.22:0,63,1862	1/1:11,27:40:99:5113,114,0	0/0:33,0:33:87.27:0,87,2459	1/1:10,9:20:36.12:1462,36,0	0/0:45,0:44:99:0,132,3754	0/0:22,0:22:66.20:0,66,1736	0/0:22,0:22:60.21:0,60,1772	0/0:53,0:53:99:0,151,4457	0/0:22,0:22:66.23:0,66,1985	0/0:11,0:11:33.11:0,33,977	0/0:23,0:23:69.21:0,69,1920	0/0:25,0:25:69.24:0,69,2090	0/0:30,0:30:78.26:0,78,2227	0/0:23,0:23:63.21:0,63,1762	0/0:13,0:13:33.11:0,33,999
chr10	92557641	.	CTTCTTTTTTTTTTTTTTTTTTTGG	C	10811.36	PASS	AB=0.947;AC=21;AF=0.375;AN=56;BaseQRankSum=6.538;DP=484;FS=8.728;HRun=0;HaplotypeScore=297.1703;InbreedingCoeff=0.8752;MQ=66.36;MQ0=5;MQRankSum=-7.307;QD=54.60;ReadPosRankSum=6.832;VQSLOD=2.2786;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:20:42.11:0,42,1677	0/0:1,0:8:15.05:0,15,766	0/0:20,0:13:21.07:0,21,728	0/0:14,0:11:9.27:0,9,437	0/0:21,0:20:42.14:0,42,2958	0/0:14,0:13:33.11:0,33,2142	0/0:17,0:17:33.11:0,33,2135	0/0:11,0:21:47.65:0,48,2155	0/0:13,0:12:18.06:0,18,1119	1/1:14,11:25:32.30:1813,32,0	1/1:3,6:9:11.65:706,12,0	1/1:16,11:27:29.13:1692,29,0	1/1:9,8:17:14.37:883,14,0	1/1:6,11:17:26.65:1590,27,0	0/0:1,0:22:45.15:0,45,2290	0/0:22,0:22:57.20:0,57,3474	0/0:1,0:20:21.96:0,22,998	1/1:11,7:17:9.46:703,9,0	0/0:20,0:20:39.13:0,39,2004	0/0:16,0:16:36.12:0,36,2365	0/0:13,0:13:20.28:0,20,1074	1/1:11,6:17:11.16:705,11,0	1/1:4,4:8:11.82:707,12,0	1/1:14,12:26:16.03:992,16,0	1/1:11,5:16:14.29:883,14,0	0/1:17,1:18:99:138,0,1707	0/0:18,0:18:39.13:0,39,2292	0/0:4,0:4:12.04:0,12,924
chr10	92559306	.	GC	G	15631.72	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=13.285;DP=805;FS=0.593;HRun=6;HaplotypeScore=97.1582;InbreedingCoeff=0.9989;MQ=86.48;MQ0=0;MQRankSum=-5.465;QD=28.27;ReadPosRankSum=3.637;VQSLOD=4.9941;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,44:47:99:1322,123,0	1/1:0,9:9:24.06:258,24,0	0/0:30,0:29:81.23:0,81,997	0/0:23,0:23:60.13:0,60,724	0/0:25,0:25:63.20:0,63,829	1/1:0,19:19:51.13:548,51,0	1/1:2,33:35:72.18:774,72,0	1/1:6,30:36:90.22:967,90,0	0/0:19,0:19:54.16:0,54,696	1/1:2,28:30:78.19:838,78,0	1/1:0,15:15:42.11:451,42,0	1/1:1,31:32:87.22:935,87,0	1/1:0,27:27:78.20:838,78,0	1/1:1,39:40:99:1225,114,0	1/1:2,38:40:96.24:1032,96,0	1/1:2,31:33:90.22:967,90,0	1/1:1,40:41:99:1257,117,0	1/1:3,33:36:93.23:1000,93,0	0/0:20,0:20:57.17:0,57,737	0/0:27,0:27:69.22:0,69,908	0/0:47,0:47:99:0,135,1775	1/1:1,29:30:81.20:871,81,0	1/1:3,17:20:57.14:605,57,0	1/1:3,42:45:99:1225,114,0	1/1:1,17:18:48.12:516,48,0	0/0:19,1:20:21.92:0,22,638	0/0:33,0:33:87.26:0,87,1113	0/0:8,0:8:24.08:0,24,316
chr10	92560138	.	A	ATGCTGGGGTGTGACCCCAGCAC	99653.56	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=0.544;DP=719;FS=4.785;HRun=0;HaplotypeScore=357.4530;InbreedingCoeff=0.9951;MQ=79.71;MQ0=0;MQRankSum=-19.326;QD=192.75;ReadPosRankSum=3.303;VQSLOD=3.9820;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,6:41:72.25:5839,72,0	1/1:16,3:20:42.14:3467,42,0	0/0:24,0:24:72.20:0,72,3155	0/0:29,0:29:78.19:0,78,3603	0/0:10,0:10:30.10:0,30,1643	1/1:18,6:24:66.23:5551,66,0	1/1:30,2:35:87.30:7054,87,0	1/1:40,0:40:99:6156,105,0	0/0:27,0:27:78.27:0,78,4738	1/1:18,4:23:66.23:4905,66,0	1/1:10,8:20:39.13:3670,39,0	1/1:20,10:33:87.30:7807,87,0	1/1:30,6:40:99:8251,105,0	1/1:29,9:41:99:8977,105,0	1/1:22,13:39:93.32:8064,93,0	1/1:21,7:30:84.29:7490,84,0	1/1:13,3:23:36.12:2598,36,0	1/1:15,3:19:45.15:3545,45,0	0/0:10,0:10:27.08:0,27,1366	0/0:17,0:17:51.18:0,51,2953	0/0:28,0:28:69.23:0,69,3788	1/1:14,4:19:33.11:3218,33,0	1/1:11,11:23:55.47:5371,55,0	1/1:22,3:27:51.18:3750,51,0	1/1:10,7:19:42.14:3943,42,0	0/0:22,0:22:66.22:0,66,3444	0/0:31,0:30:93.30:0,93,4717	0/0:4,0:4:12.04:0,12,736
chr10	92564053	.	T	TCACAC	3027.80	PASS	AB=0.933;AC=26;AF=0.464;AN=56;BaseQRankSum=6.330;DP=556;FS=20.706;HRun=0;HaplotypeScore=185.8884;InbreedingCoeff=-0.7266;MQ=52.52;MQ0=9;MQRankSum=-5.303;QD=6.24;ReadPosRankSum=-4.973;VQSLOD=-0.1143;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:32:64.77:65,0,683	0/1:10,0:10:99:245,0,215	0/0:23,0:16:48.15:0,48,638	0/0:30,0:16:45.14:0,45,592	0/1:14,0:26:99:110,0,203	0/1:25,0:23:16.27:16,0,620	0/1:20,0:18:23.77:24,0,511	0/1:20,0:18:99:117,0,346	0/1:12,0:19:76.69:77,0,297	0/1:20,0:19:99:514,0,318	0/1:8,0:8:55.66:56,0,73	0/1:25,0:25:85.64:86,0,167	0/1:21,1:24:59.03:329,0,59	0/1:34,0:33:99:305,0,385	0/1:17,0:16:25.19:25,0,186	0/1:21,0:21:99:349,0,338	0/1:15,0:15:99:132,0,331	0/1:13,0:12:99:221,0,187	0/0:18,0:17:21.39:0,21,510	0/1:13,0:14:8.23:8,0,326	0/1:10,0:17:43.97:44,0,269	0/1:12,0:12:12.83:13,0,111	0/1:10,0:10:25.37:25,0,153	0/1:33,0:29:93.29:93,0,343	0/1:26,0:24:99:117,0,101	0/1:9,0:15:80.09:80,0,228	0/1:10,0:22:80.70:81,0,258	1/1:0,0:3:6:55,6,0
chr10	92565207	.	GAA	G	19592.96	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=3.270;DP=626;FS=0.000;HRun=5;HaplotypeScore=101.1342;InbreedingCoeff=0.9955;MQ=84.26;MQ0=3;MQRankSum=-11.103;QD=33.96;ReadPosRankSum=7.288;VQSLOD=3.6107;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:57.19:797,57,0	1/1:0,7:7:18.06:252,18,0	0/0:21,0:21:59.78:0,60,991	0/0:28,0:28:74.53:0,75,1123	1/1:0,29:29:81.27:1127,81,0	1/1:0,19:19:48.09:648,48,0	1/1:2,30:32:81.27:1133,81,0	1/1:0,29:29:87.23:1149,87,0	1/1:2,13:15:33.11:462,33,0	1/1:1,27:28:84.26:1142,84,0	1/1:1,16:17:48.07:639,48,0	1/1:0,24:24:63.07:833,63,0	1/1:0,23:23:60.06:792,60,0	1/1:4,20:24:62.93:784,63,0	1/1:1,20:21:54.18:756,54,0	1/1:0,19:19:48.16:672,48,0	1/1:1,22:22:51.17:714,51,0	1/1:0,17:17:33.04:438,33,0	1/1:3,18:21:54.04:734,54,0	1/1:0,24:23:63.15:852,63,0	1/1:2,27:29:69.23:966,69,0	1/1:0,21:21:45.01:581,45,0	1/1:0,18:18:41.87:512,42,0	1/1:0,26:26:57.10:772,57,0	1/1:1,19:20:51.08:688,51,0	1/1:3,25:27:72.15:932,72,0	1/1:0,18:18:51.17:713,51,0	1/1:0,20:20:36.12:504,36,0
chr10	92565362	.	GT	G	888.12	PASS	AB=0.718;AC=14;AF=0.250;AN=56;BaseQRankSum=-1.564;DP=520;FS=9.262;HRun=13;HaplotypeScore=78.3000;InbreedingCoeff=0.6011;MQ=68.26;MQ0=2;MQRankSum=2.043;QD=6.30;ReadPosRankSum=6.520;VQSLOD=1.6935;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:7,12:22:52.69:116,0,53	1/1:2,5:7:8.94:66,9,0	0/0:30,1:11:5.03:0,5,30	0/0:19,0:8:8.19:0,8,53	0/0:24,0:25:57.32:0,57,501	1/1:3,0:22:28.51:82,29,0	1/1:2,0:10:14.25:41,14,0	0/0:36,0:36:55.01:0,55,421	0/0:11,0:11:17.74:0,18,135	0/0:17,0:20:32.04:0,32,293	0/0:9,0:25:37.56:0,38,222	0/0:16,0:17:17.46:0,17,140	0/0:6,0:8:3.58:0,4,90	0/0:1,0:9:8.52:0,9,43	1/1:4,9:13:0.65:168,1,0	1/1:6,1:14:16.99:62,17,0	1/1:10,24:37:48.66:491,49,0	0/0:12,0:30:24.94:0,25,167	0/0:11,0:12:14.81:0,15,125	0/0:12,0:14:41.40:0,41,355	0/0:14,0:14:33.93:0,34,317	0/0:7,0:18:19.43:0,19,115	0/0:8,0:18:0.43:0,0,136	0/0:3,0:2:1.25:0,1,3	0/0:3,0:22:25.36:0,25,125	0/0:20,2:23:7.05:0,7,361	0/0:16,3:19:17.62:0,18,290	0/1:13,3:15:35.65:36,0,174
chr10	92566129	.	TC	T	5450.78	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=16.056;DP=848;FS=3.521;HRun=1;HaplotypeScore=87.6411;InbreedingCoeff=0.9999;MQ=80.52;MQ0=0;MQRankSum=-0.782;QD=37.08;ReadPosRankSum=-0.283;VQSLOD=4.9055;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,51:51:99:1762,126,0	1/1:0,10:10:30.10:413,30,0	0/0:22,0:22:66.22:0,66,1029	0/0:19,0:19:51.16:0,51,798	0/0:24,0:24:72.23:0,72,1127	0/0:21,0:21:63.21:0,63,1007	0/0:40,0:40:99:0,120,1847	1/1:0,26:26:75.22:1011,75,0	0/0:32,0:32:96.33:0,96,1532	0/0:35,0:35:99:0,105,1679	0/0:22,0:22:66.23:0,66,1051	0/0:46,0:46:99:0,138,2205	0/0:40,0:40:99:0,120,1914	0/0:31,0:31:90.27:0,90,1386	1/1:1,34:35:90.30:1258,90,0	0/0:49,0:49:99:0,147,2322	1/1:0,25:25:72.24:1007,72,0	0/0:19,0:19:54.18:0,54,857	0/0:30,0:30:90.30:0,90,1415	0/0:25,0:25:75.24:0,75,1176	0/0:53,0:53:99:0,159,2485	0/0:37,0:37:99:0,111,1702	0/0:23,0:23:69.22:0,69,1055	0/0:24,0:24:72.25:0,72,1150	0/0:26,0:26:78.25:0,78,1223	0/0:39,0:39:99:0,117,1824	0/0:28,0:28:84.26:0,84,1295	0/0:16,0:16:48.16:0,48,764
chr10	92567274	.	T	TAC	22710.76	PASS	AB=0.889;AC=35;AF=0.625;AN=56;BaseQRankSum=-17.357;DP=798;FS=1.939;HRun=0;HaplotypeScore=86.5985;InbreedingCoeff=0.9234;MQ=84.47;MQ0=2;MQRankSum=-1.420;QD=43.26;ReadPosRankSum=1.687;VQSLOD=6.5110;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,1968	1/1:2,9:11:24.08:440,24,0	0/0:26,0:26:63.21:0,63,885	0/0:23,0:23:63.13:0,63,839	0/0:21,0:21:60.15:0,60,815	1/1:1,18:18:48.16:880,48,0	1/1:0,18:18:51.17:935,51,0	1/1:5,37:42:99:1902,108,0	0/0:29,0:29:87.28:0,87,1225	1/1:3,27:30:81.28:1484,81,0	1/1:2,10:13:27.09:495,27,0	1/1:0,36:36:93.32:1704,93,0	1/1:2,31:35:84.29:1521,84,0	1/1:0,36:36:96.33:1759,96,0	1/1:1,49:51:99:2364,129,0	1/1:2,38:40:96.33:1760,96,0	1/1:1,34:36:90.31:1649,90,0	1/1:0,21:21:54.19:990,54,0	0/0:25,0:25:72.24:0,72,1028	0/0:16,0:16:39.13:0,39,557	0/0:35,0:35:94.85:0,95,1317	1/1:0,20:20:51.17:935,51,0	1/1:2,21:22:48.16:880,48,0	1/1:0,39:38:90.31:1650,90,0	1/1:3,27:31:69.24:1265,69,0	0/1:21,3:24:98.81:99,0,733	0/0:37,0:37:99:0,102,1423	0/0:15,0:15:45.15:0,45,645
chr10	92569025	.	CT	C	2348.08	PASS	AB=0.787;AC=30;AF=0.536;AN=56;BaseQRankSum=1.970;DP=652;FS=3.551;HRun=14;HaplotypeScore=81.0871;InbreedingCoeff=0.6815;MQ=68.03;MQ0=2;MQRankSum=1.083;QD=5.58;ReadPosRankSum=2.930;VQSLOD=2.8853;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,29:44:3.70:290,4,0	0/0:5,0:5:8.17:0,8,35	0/0:31,1:18:4.35:0,4,162	0/1:33,0:18:1.04:1,0,45	0/0:21,0:26:47.29:0,47,380	1/1:9,0:22:23.22:101,23,0	1/1:6,0:27:34.57:100,35,0	1/1:15,0:35:39.54:153,40,0	0/0:17,0:18:25.68:0,26,218	1/1:5,15:20:15.14:223,15,0	1/1:4,9:12:11.80:82,12,0	1/1:7,16:25:16.56:197,17,0	1/1:5,17:22:29.68:217,30,0	0/1:10,8:18:38.90:59,0,39	0/0:25,2:24:29.43:0,29,190	1/1:5,1:24:27.39:91,27,0	0/0:30,0:30:35.54:0,36,223	0/1:6,23:30:21.94:293,0,22	0/0:11,0:11:21:0,21,186	0/0:21,0:26:32.71:0,33,291	0/0:22,0:22:36.38:0,36,306	1/1:6,13:19:16.94:122,17,0	1/1:3,10:13:26.69:184,27,0	1/1:10,24:34:24.72:307,25,0	1/1:3,8:13:16.89:126,17,0	0/1:24,3:27:13.19:13,0,271	0/0:21,3:23:12.39:0,12,237	0/0:10,0:10:24:0,24,215
chr10	92569027	.	T	TC	1142.98	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.857;DP=672;FS=19.814;HRun=0;HaplotypeScore=93.3996;InbreedingCoeff=0.9859;MQ=67.22;MQ0=3;MQRankSum=-1.833;QD=17.32;ReadPosRankSum=2.289;VQSLOD=4.3143;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:59.62:0,60,685	1/1:4,2:6:12.90:126,13,0	0/0:33,0:18:51.28:0,51,481	0/0:34,0:18:24.27:0,24,237	0/0:26,0:26:61.46:0,61,676	0/0:21,0:21:20.04:0,20,353	0/0:27,0:27:62.35:0,62,423	0/0:35,0:34:89.59:0,90,719	0/0:19,0:19:38.12:0,38,398	0/0:22,0:22:57.01:0,57,536	0/0:15,0:14:28.73:0,29,226	0/0:25,0:25:56.93:0,57,495	0/0:26,0:26:23.75:0,24,359	0/0:19,0:19:28.46:0,28,298	1/1:13,15:25:59.19:569,59,0	0/0:25,0:24:42.25:0,42,341	1/1:3,29:31:58.40:588,58,0	0/0:31,0:31:70.65:0,71,595	0/0:12,0:11:33.07:0,33,382	0/0:24,0:24:57.98:0,58,642	0/0:23,0:23:48.15:0,48,562	0/0:20,0:20:46.04:0,46,378	0/0:12,0:12:33.39:0,33,273	0/0:34,0:33:71.27:0,71,604	0/0:14,0:14:30.94:0,31,232	0/0:31,0:31:77.56:0,78,845	0/0:23,0:22:56.96:0,57,579	0/0:10,0:10:24.07:0,24,308
chr10	92569039	.	T	TC	1015.16	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.352;DP=636;FS=6.660;HRun=5;HaplotypeScore=86.1675;InbreedingCoeff=0.8788;MQ=59.41;MQ0=9;MQRankSum=0.613;QD=15.62;ReadPosRankSum=1.189;VQSLOD=3.0243;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:75.37:0,75,485	1/1:4,2:6:11.92:101,12,0	0/0:39,1:14:5.38:0,5,44	0/0:28,0:9:5.29:0,5,35	0/0:20,0:20:19.64:0,20,264	0/0:18,0:18:34.25:0,34,197	0/0:24,0:24:55.79:0,56,335	0/0:29,0:28:43.99:0,44,291	0/0:19,0:19:28.93:0,29,237	0/0:27,0:27:47.41:0,47,350	0/0:14,0:13:15.24:0,15,98	0/0:23,0:23:41.22:0,41,257	0/0:25,0:25:41.24:0,41,259	0/0:16,0:16:17.81:0,18,140	1/1:14,14:27:60.32:526,60,0	0/0:25,0:24:50.99:0,51,339	1/1:12,17:28:57.30:528,57,0	0/0:33,0:33:73.82:0,74,495	0/0:8,0:7:9.02:0,9,96	0/0:19,0:19:24.67:0,25,271	0/0:25,0:24:23.64:0,24,233	0/0:17,0:17:26.49:0,26,166	0/0:13,0:12:29.48:0,29,188	0/0:30,0:29:55.96:0,56,360	0/0:14,0:14:32.39:0,32,215	0/0:32,0:32:65.63:0,66,574	0/0:18,0:18:26.82:0,27,226	0/0:10,0:10:20.99:0,21,209
chr10	92570779	.	A	AACC	621.63	PASS	AB=0.794;AC=3;AF=0.054;AN=56;BaseQRankSum=5.545;DP=782;FS=2.507;HRun=0;HaplotypeScore=116.7248;InbreedingCoeff=-0.0566;MQ=87.04;MQ0=0;MQRankSum=-5.833;QD=15.94;ReadPosRankSum=3.450;VQSLOD=3.3350;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,151,2774	0/1:8,8:16:99:503,0,331	0/0:28,0:27:81.16:0,81,1233	0/0:30,0:30:87.24:0,87,1481	0/0:38,0:38:99:0,108,1976	0/0:26,0:26:78.25:0,78,1412	0/0:33,0:33:93.30:0,93,1666	0/0:30,0:30:84.25:0,84,1414	0/0:24,0:24:69.24:0,69,1279	0/0:33,0:33:96.32:0,96,1732	0/0:14,0:14:39.10:0,39,682	0/0:27,0:27:78.25:0,78,1422	0/0:38,0:38:99:0,114,2033	0/0:26,0:26:78.15:0,78,1351	0/1:9,3:12:99:179,0,268	0/0:35,0:35:99:0,105,1864	0/1:10,1:11:39.87:40,0,388	0/0:16,0:16:45.15:0,45,820	0/0:23,0:23:69.20:0,69,1188	0/0:37,0:37:99:0,102,1837	0/0:25,0:25:75.26:0,75,1388	0/0:37,0:37:99:0,108,1853	0/0:31,0:31:90.29:0,90,1619	0/0:19,0:19:54.16:0,54,964	0/0:21,0:21:63.20:0,63,1136	0/0:41,0:41:99:0,123,2228	0/0:40,0:40:99:0,114,2006	0/0:19,0:19:48.10:0,48,803
chr10	92570851	.	TAAACTC	T	1541.52	PASS	AB=0.545;AC=5;AF=0.089;AN=56;BaseQRankSum=7.443;DP=757;FS=47.701;HRun=0;HaplotypeScore=151.5567;InbreedingCoeff=0.7763;MQ=81.09;MQ0=0;MQRankSum=-7.369;QD=55.05;ReadPosRankSum=1.367;VQSLOD=1.9623;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,150,5215	0/1:1,5:6:94.89:366,0,95	0/0:21,0:21:52.73:0,53,1976	0/0:19,0:19:54.19:0,54,1924	0/0:28,0:28:84.25:0,84,2741	0/0:22,0:22:66.23:0,66,2413	0/0:28,0:28:84.25:0,84,2749	0/0:36,0:36:99:0,108,3584	0/0:25,0:25:75.26:0,75,2687	0/0:31,0:31:93.32:0,93,3389	0/0:19,0:19:57.10:0,57,1871	0/0:37,0:37:99:0,111,4032	0/0:39,0:39:99:0,117,4342	0/0:24,0:24:72.25:0,72,2688	1/1:0,11:11:33.11:844,33,0	0/0:36,0:36:99:0,108,3854	1/1:0,11:11:18.06:460,18,0	0/0:25,0:25:75.26:0,75,2757	0/0:22,0:22:63.20:0,63,2200	0/0:32,0:32:96.33:0,96,3551	0/0:34,0:34:99:0,102,3688	0/0:36,0:36:99:0,108,3877	0/0:25,0:25:75.26:0,75,2795	0/0:27,0:27:81.28:0,81,2999	0/0:17,0:17:51.18:0,51,1858	0/0:33,0:33:99:0,99,3599	0/0:46,0:46:99:0,138,5037	0/0:17,0:17:51.16:0,51,1829
chr10	92571258	.	TG	T	11798.65	PASS	AB=0.536;AC=21;AF=0.375;AN=56;BaseQRankSum=14.962;DP=781;FS=0.856;HRun=1;HaplotypeScore=75.5173;InbreedingCoeff=0.9235;MQ=85.64;MQ0=0;MQRankSum=-2.558;QD=38.06;ReadPosRankSum=3.270;VQSLOD=5.5085;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,154,2412	0/1:2,13:15:56.78:422,0,57	0/0:25,0:25:72.09:0,72,995	0/0:24,0:24:63.69:0,64,989	1/1:0,25:25:72.17:983,72,0	0/0:21,0:21:63.21:0,63,1005	0/0:31,0:31:93.32:0,93,1487	0/0:31,0:31:90.29:0,90,1378	1/1:0,33:33:87.29:1217,87,0	0/0:29,0:29:87.28:0,87,1328	0/0:17,0:17:51.16:0,51,787	0/0:35,0:35:99:0,105,1653	0/0:32,0:32:96.24:0,96,1478	0/0:26,0:26:78.27:0,78,1247	1/1:0,36:36:96.32:1343,96,0	0/0:31,0:31:93.30:0,93,1464	1/1:0,29:29:81.27:1133,81,0	0/0:16,0:16:48.16:0,48,767	1/1:0,26:26:78.26:1088,78,0	1/1:0,26:26:72.14:956,72,0	1/1:1,52:53:99:2028,147,0	0/0:32,0:32:93.32:0,93,1487	0/0:18,0:18:54.18:0,54,863	0/0:35,0:35:99:0,105,1621	0/0:17,0:17:51.17:0,51,814	1/1:0,22:22:66.22:911,66,0	1/1:1,36:36:99:1382,99,0	1/1:0,8:8:24.08:336,24,0
chr10	92571890	.	C	CT	3947.21	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-13.561;DP=799;FS=0.000;HRun=4;HaplotypeScore=74.6108;InbreedingCoeff=0.8713;MQ=85.85;MQ0=0;MQRankSum=-1.740;QD=27.99;ReadPosRankSum=-1.609;VQSLOD=2.2889;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,1498	0/1:15,0:15:7.47:7,0,104	0/0:37,0:37:98.85:0,99,1043	0/0:23,0:23:41.18:0,41,521	0/0:40,0:40:99:0,114,1282	1/1:3,26:29:69.23:943,69,0	1/1:2,23:25:57.19:780,57,0	1/1:4,30:34:87.26:1143,87,0	0/0:30,0:30:78.20:0,78,875	0/0:21,0:21:57.16:0,57,639	0/0:19,0:19:54.10:0,54,581	0/0:34,0:34:99:0,99,1113	0/0:34,0:34:93.25:0,93,1045	0/0:42,0:42:99:0,123,1385	0/0:22,0:22:8.80:0,9,55	1/1:5,33:38:50.36:1074,50,0	0/0:23,0:23:23.55:0,24,150	0/0:23,0:23:60.15:0,60,670	0/0:26,0:26:69.18:0,69,773	0/0:28,0:28:75.20:0,75,841	0/0:36,0:36:99:0,102,1127	0/0:24,0:24:66.16:0,66,729	0/0:20,0:20:48.14:0,48,544	0/0:26,0:26:72.19:0,72,807	0/0:28,0:28:81.23:0,81,919	0/0:23,0:23:66.17:0,66,733	0/0:35,0:35:93.25:0,93,1046	0/0:18,0:18:54.15:0,54,612
chr10	92574316	.	A	AT	2587.55	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-11.484;DP=821;FS=0.463;HRun=3;HaplotypeScore=78.0663;InbreedingCoeff=0.9999;MQ=78.01;MQ0=0;MQRankSum=-1.699;QD=33.60;ReadPosRankSum=1.089;VQSLOD=4.1035;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,1547	1/1:1,12:13:36.12:504,36,0	0/0:23,0:23:49.97:0,50,633	0/0:18,0:18:37.09:0,37,442	0/0:27,0:27:78.22:0,78,923	0/0:26,0:26:72.21:0,72,852	0/0:27,0:27:75.20:0,75,875	0/0:27,0:27:75.21:0,75,873	0/0:41,0:41:99:0,120,1404	0/0:27,0:27:75.20:0,75,884	0/0:24,0:24:66.20:0,66,790	0/0:34,0:34:99:0,99,1176	0/0:30,0:30:81.22:0,81,956	0/0:24,0:24:63.18:0,63,741	1/1:0,37:37:90.13:1260,90,0	0/0:39,0:39:99:0,117,1372	1/1:1,26:27:69.23:966,69,0	0/0:14,0:14:42.13:0,42,504	0/0:24,0:24:66.19:0,66,777	0/0:29,0:29:78.22:0,78,922	0/0:48,0:48:99:0,135,1593	0/0:29,0:29:84.25:0,84,994	0/0:26,0:26:60.18:0,60,719	0/0:43,0:43:99:0,117,1390	0/0:29,0:29:78.01:0,78,898	0/0:39,0:39:99:0,111,1303	0/0:37,0:37:99:0,102,1198	0/0:14,0:14:42.09:0,42,478
chr10	92576156	.	A	AAT	2130.90	PASS	AB=0.751;AC=9;AF=0.161;AN=56;BaseQRankSum=12.386;DP=822;FS=0.381;HRun=0;HaplotypeScore=206.6523;InbreedingCoeff=-0.1992;MQ=61.65;MQ0=2;MQRankSum=-11.628;QD=7.75;ReadPosRankSum=3.158;VQSLOD=3.2563;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:25.94:0,26,173	0/0:12,0:12:35.27:0,35,219	0/0:43,0:39:99:0,99,1499	0/0:34,0:34:92.98:0,93,1445	0/0:31,0:31:93.26:0,93,1437	0/0:21,0:21:38.94:0,39,246	0/0:31,0:31:51.94:0,52,490	0/0:36,0:36:99:0,104,1089	0/0:47,0:47:99:0,141,2270	0/1:31,13:44:99:344,0,289	0/1:19,8:27:99:168,0,233	0/1:22,6:28:65.98:215,0,66	0/1:22,13:35:99:302,0,307	0/1:18,15:33:99:432,0,172	0/0:36,0:36:29.96:0,30,513	0/0:34,0:34:57.77:0,58,398	0/0:33,0:33:27.66:0,28,503	0/0:12,1:13:3.79:0,4,173	0/0:14,0:14:42.14:0,42,685	0/0:28,0:28:81.28:0,81,1319	0/0:27,0:27:78.24:0,78,1222	0/1:14,14:28:99:304,0,236	0/1:22,5:27:99:130,0,277	0/1:17,7:24:56.56:57,0,222	0/1:16,13:29:99:319,0,220	0/0:25,0:25:75.25:0,75,1202	0/0:41,0:41:99:0,123,1977	0/0:11,0:11:30.09:0,30,464
chr10	92576157	.	C	CAATCAA	10074.03	PASS	AB=0.728;AC=17;AF=0.304;AN=56;BaseQRankSum=13.902;DP=848;FS=1.241;HRun=0;HaplotypeScore=241.7636;InbreedingCoeff=-0.1171;MQ=60.45;MQ0=2;MQRankSum=-11.357;QD=21.66;ReadPosRankSum=3.152;VQSLOD=4.3840;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:52:89.56:427,0,90	0/0:12,0:12:35.96:0,36,454	0/0:42,0:38:99:0,102,1809	0/0:36,0:36:93.27:0,93,1694	0/0:32,0:32:93.27:0,93,1946	0/1:4,0:22:57.54:237,0,58	0/1:9,0:31:99:204,0,288	0/1:35,0:35:99:99,0,724	0/0:48,0:48:99:0,141,3316	0/1:31,13:44:15.93:1361,0,16	1/1:20,8:28:14.30:873,14,0	0/1:22,6:28:74.11:559,0,74	0/1:22,13:35:51.07:1185,0,51	0/1:17,14:32:25.41:1332,0,25	0/0:35,0:35:49.11:0,49,1112	0/1:7,0:37:99:336,0,155	0/0:31,0:31:69.97:0,70,1082	0/1:11,1:12:75.74:102,0,76	0/0:15,0:15:42.14:0,42,876	0/0:29,0:29:81.28:0,81,1967	0/0:26,0:26:75.22:0,75,1745	1/1:15,14:29:7.69:1168,8,0	0/1:22,5:27:99:580,0,108	0/1:17,7:24:50.39:358,0,50	0/1:16,13:29:38.11:1253,0,38	0/0:25,0:25:75.25:0,75,1734	0/0:41,0:41:99:0,123,2971	0/0:11,0:11:20.77:0,21,651
chr10	92576171	.	C	CAATCAATC	18556.36	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=8.196;DP=865;FS=3.521;HRun=0;HaplotypeScore=247.3397;InbreedingCoeff=0.9637;MQ=61.58;MQ0=2;MQRankSum=-11.019;QD=38.98;ReadPosRankSum=-1.582;VQSLOD=4.3282;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:45,0:45:25.33:723,25,0	0/0:14,0:14:27.05:0,27,447	0/0:41,0:37:63.07:0,63,938	0/0:30,0:30:36.04:0,36,633	0/0:30,0:30:63.16:0,63,1313	1/1:26,0:26:32.93:269,33,0	1/1:28,0:28:32.95:273,33,0	1/1:31,0:31:37.03:288,37,0	0/0:48,0:48:99:0,120,2529	1/1:46,0:46:99:2731,114,0	1/1:32,0:32:75.19:1614,75,0	1/1:14,13:30:27.07:920,27,0	1/1:41,0:41:93.16:2366,93,0	1/1:32,0:32:78.24:2362,78,0	0/0:34,0:34:7.45:0,7,1029	1/1:37,0:37:2.93:343,3,0	0/0:29,0:29:31.74:0,32,994	1/1:12,0:12:26.98:597,27,0	0/0:14,0:14:27.05:0,27,444	0/0:38,0:38:81.25:0,81,1820	0/0:31,0:31:69.16:0,69,1503	1/1:36,0:36:81.19:2156,81,0	1/1:26,0:26:54.14:1138,54,0	1/1:26,0:26:43.50:745,44,0	1/1:28,0:28:72.15:2032,72,0	0/0:31,0:31:60.19:0,60,1271	0/0:38,0:38:99:0,111,2439	0/0:11,0:11:24.01:0,24,377
chr10	92577371	.	CCAAA	C	1692.91	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.233;DP=760;FS=9.512;HRun=0;HaplotypeScore=117.4351;InbreedingCoeff=0.9993;MQ=85.42;MQ0=0;MQRankSum=-4.659;QD=47.03;ReadPosRankSum=-4.865;VQSLOD=2.8067;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.22:0,84,2216	0/0:14,0:14:39.13:0,39,1062	0/0:28,0:28:81.12:0,81,1992	0/0:25,0:25:66.23:0,66,1691	0/0:30,0:30:87.29:0,87,2269	0/0:25,0:25:72.25:0,72,1950	0/0:30,0:30:90.31:0,90,2451	1/1:2,34:36:99:1788,99,0	0/0:31,0:31:93.32:0,93,2500	0/0:36,0:36:99:0,105,2803	0/0:28,0:28:84.29:0,84,2259	0/0:23,0:23:69.24:0,69,1889	0/0:27,0:27:75.26:0,75,2031	0/0:22,0:22:63.22:0,63,1725	0/0:32,0:32:93.32:0,93,2548	0/0:29,0:29:84.29:0,84,2296	0/0:34,0:34:99:0,102,2692	0/0:10,0:10:30.10:0,30,821	0/0:22,0:22:63.22:0,63,1715	0/0:36,0:36:99:0,102,2623	0/0:42,0:42:99:0,117,3172	0/0:26,0:26:78.24:0,78,2016	0/0:20,0:20:60.21:0,60,1629	0/0:16,0:16:48.15:0,48,1257	0/0:24,0:24:72.25:0,72,1950	0/0:30,0:30:90.31:0,90,2452	0/0:43,0:42:99:0,129,3489	0/0:12,0:12:36.12:0,36,949
chr10	92577852	.	A	AG	750	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.179;DP=670;FS=1.365;HRun=0;HaplotypeScore=82.6465;InbreedingCoeff=0.9933;MQ=75.97;MQ0=0;MQRankSum=-10.183;QD=19.23;ReadPosRankSum=2.323;VQSLOD=5.7462;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.19:0,72,967	1/1:0,5:5:15:133,15,0	0/0:19,0:19:54.16:0,54,719	0/0:16,0:15:37.36:0,37,488	0/0:18,0:18:54.18:0,54,755	0/0:26,0:26:78.26:0,78,1091	0/0:18,0:18:54.16:0,54,736	0/0:27,0:27:78.26:0,78,1085	0/0:34,0:34:99:0,102,1426	0/0:35,0:35:99:0,105,1466	0/0:29,0:29:87.29:0,87,1211	0/0:22,0:22:66.22:0,66,916	0/0:30,0:30:90.30:0,90,1254	0/0:29,0:29:84.26:0,84,1152	1/1:2,23:25:33.33:549,33,0	0/0:26,0:26:78.26:0,78,1091	1/1:1,8:9:23.76:208,24,0	0/0:30,0:30:84.28:0,84,1174	0/0:26,0:26:74.95:0,75,994	0/0:27,0:27:81.27:0,81,1129	0/0:21,0:21:63.20:0,63,864	0/0:28,0:28:84.28:0,84,1173	0/0:26,0:26:78.26:0,78,1090	0/0:16,0:16:48.16:0,48,671	0/0:23,0:23:66.22:0,66,923	0/0:25,0:25:75.25:0,75,1049	0/0:32,0:32:96.32:0,96,1336	0/0:23,0:23:69.23:0,69,964
chr10	92577854	.	T	TGAAAAGG	4512.95	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.574;DP=687;FS=1.230;HRun=0;HaplotypeScore=161.5480;InbreedingCoeff=0.9830;MQ=75.68;MQ0=0;MQRankSum=-10.360;QD=94.02;ReadPosRankSum=0.988;VQSLOD=5.8049;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.22:0,69,1833	1/1:1,5:6:18.06:651,18,0	0/0:18,0:18:54.14:0,54,1341	0/0:18,0:17:39.74:0,40,1043	0/0:19,0:19:57.18:0,57,1533	0/0:26,0:26:78.27:0,78,2181	0/0:17,0:17:51.18:0,51,1388	0/0:30,0:30:84.26:0,84,2105	0/0:36,0:36:99:0,105,2859	0/0:35,0:35:99:0,105,2867	0/0:29,0:29:87.30:0,87,2395	0/0:22,0:22:66.23:0,66,1815	0/0:31,0:31:93.26:0,93,2353	0/0:31,0:31:81.26:0,81,2164	1/1:5,23:28:10.98:2760,11,0	0/0:26,0:26:78.25:0,78,2122	1/1:6,8:14:36.10:1102,36,0	0/0:29,0:29:87.30:0,87,2362	0/0:27,0:27:75.25:0,75,1941	0/0:27,0:27:81.28:0,81,2249	0/0:21,0:21:63.22:0,63,1678	0/0:28,0:28:84.29:0,84,2302	0/0:26,0:26:78.27:0,78,2180	0/0:16,0:16:48.16:0,48,1329	0/0:23,0:23:66.23:0,66,1837	0/0:25,0:25:72.23:0,72,1899	0/0:32,0:32:96.33:0,96,2623	0/0:23,0:23:69.21:0,69,1662
chr10	92578050	.	T	TA	3093.92	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.899;DP=773;FS=0.427;HRun=5;HaplotypeScore=71.9254;InbreedingCoeff=0.9983;MQ=82.23;MQ0=0;MQRankSum=-1.055;QD=34.00;ReadPosRankSum=0.146;VQSLOD=3.8731;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,105,1119	1/1:1,11:12:30.10:395,30,0	0/0:26,0:26:55.44:0,55,582	0/0:19,0:19:39.06:0,39,405	0/0:20,0:20:60.15:0,60,643	0/0:30,0:30:90.23:0,90,967	0/0:28,0:28:84.21:0,84,902	0/0:30,0:30:84.20:0,84,897	0/0:28,0:28:84.21:0,84,902	0/0:38,0:38:99:0,108,1143	0/0:23,0:23:63.16:0,63,677	0/0:27,0:27:81.20:0,81,870	0/0:31,0:31:81.18:0,81,862	0/0:35,0:35:90.19:0,90,950	1/1:2,35:37:96.31:1263,96,0	0/0:26,0:26:75.19:0,75,806	1/1:1,41:42:99:1579,120,0	0/0:30,0:29:90.23:0,90,966	0/0:26,0:26:72.15:0,72,758	0/0:27,0:27:72.17:0,72,766	0/0:42,0:42:99:0,120,1289	0/0:14,0:14:39.10:0,39,418	0/0:21,0:21:60.15:0,60,645	0/0:27,0:27:75.16:0,75,790	0/0:20,0:20:45.11:0,45,483	0/0:35,0:35:93.21:0,93,985	0/0:32,0:32:81.18:0,81,861	0/0:7,0:7:21.05:0,21,226
chr10	92579324	.	GCACAGGGTGTAACT	G	7248.17	PASS	AB=0.512;AC=5;AF=0.089;AN=56;BaseQRankSum=12.338;DP=786;FS=2.328;HRun=0;HaplotypeScore=298.1830;InbreedingCoeff=0.7790;MQ=76.35;MQ0=0;MQRankSum=-12.571;QD=105.05;ReadPosRankSum=1.616;VQSLOD=4.5832;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,147,9114	0/0:18,0:18:54.17:0,54,3463	0/0:22,0:23:60.21:0,60,2969	0/0:31,0:31:89.78:0,90,5283	0/0:32,0:32:96.33:0,96,6562	1/1:1,19:20:51.18:2149,51,0	1/1:3,24:27:72.25:2998,72,0	0/0:32,0:32:90.31:0,90,5677	0/0:38,0:38:99:0,111,7201	0/0:27,0:27:78.27:0,78,5117	0/0:17,0:17:48.16:0,48,3323	0/0:30,0:30:90.30:0,90,5684	0/0:25,0:25:72.23:0,72,4158	0/0:36,0:36:99:0,105,6973	0/0:34,0:34:99:0,102,6515	0/1:1,21:22:99:2101,0,157	0/0:35,0:35:99:0,102,6574	0/0:22,0:22:66.23:0,66,4399	0/0:29,0:29:81.28:0,81,5109	0/0:14,0:14:39.13:0,39,2647	0/0:47,0:47:99:0,135,8516	0/0:29,0:29:87.30:0,87,5785	0/0:24,0:24:72.25:0,72,4341	0/0:30,0:30:87.30:0,87,5761	0/0:25,0:25:75.24:0,75,4800	0/0:30,0:30:81.26:0,81,5331	0/0:31,0:31:90.31:0,90,5913	0/0:7,0:7:21.07:0,21,1476
chr10	92580337	.	AAACAACAAC	A	7727.47	PASS	AB=0.832;AC=31;AF=0.620;AN=50;BaseQRankSum=2.752;DP=709;FS=12.507;HRun=0;HaplotypeScore=217.1734;InbreedingCoeff=0.7015;MQ=59.56;MQ0=12;MQRankSum=-10.249;QD=18.53;ReadPosRankSum=-1.413;VQSLOD=2.3178;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:18.57:0,19,674	1/1:10,0:10:20.09:231,20,0	./.	./.	0/0:17,0:29:39.06:0,39,640	1/1:7,0:19:23.29:447,23,0	1/1:8,0:23:9.03:189,9,0	./.	0/0:10,0:19:33.11:0,33,682	0/1:14,8:22:38.85:435,0,39	1/1:16,11:25:29.96:632,30,0	1/1:17,10:25:30.06:757,30,0	1/1:21,18:40:48.16:1291,48,0	1/1:8,13:21:24.08:655,24,0	1/1:41,0:41:53.16:594,53,0	1/1:16,0:32:26.02:443,26,0	0/1:29,0:29:26.36:405,0,26	1/1:11,9:19:15.01:348,15,0	0/1:11,1:16:62.50:62,0,240	0/0:20,0:32:25.46:0,25,532	0/0:25,0:43:30.10:0,30,576	1/1:16,9:23:14.96:285,15,0	1/1:7,9:16:11.95:204,12,0	1/1:18,7:25:5.06:178,5,0	1/1:13,11:23:20.94:573,21,0	0/0:17,0:31:40.01:0,40,807	0/0:13,0:25:36.12:0,36,690	0/0:3,0:10:15.05:0,15,288
chr10	92580365	.	AAC	A	1367.81	PASS	AB=0.910;AC=11;AF=0.196;AN=56;BaseQRankSum=15.894;DP=733;FS=3.280;HRun=0;HaplotypeScore=149.4044;InbreedingCoeff=-0.2375;MQ=48.06;MQ0=28;MQRankSum=-7.609;QD=5.20;ReadPosRankSum=16.548;VQSLOD=-0.5252;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:51.15:0,51,722	0/1:5,6:11:40.29:263,0,40	0/0:34,0:7:15.05:0,15,185	0/0:42,0:11:25.88:0,26,288	0/0:32,0:32:52.45:0,52,695	0/1:21,0:21:60.28:60,0,82	0/0:27,0:27:4.22:0,4,370	0/1:27,0:21:37.49:37,0,561	0/0:18,0:18:15.28:0,15,335	0/0:20,0:19:12.87:0,13,446	0/0:25,0:23:8.66:0,9,502	0/1:25,0:23:7.72:8,0,416	0/1:29,0:29:64.46:64,0,234	0/1:25,0:25:5.38:5,0,389	0/1:16,18:34:89.88:635,0,90	0/1:27,0:26:72.29:72,0,282	0/1:18,12:30:99:342,0,194	0/1:16,0:15:0.01:0,0,229	0/0:20,0:16:26.73:0,27,388	0/0:26,0:24:36.12:0,36,508	0/0:41,0:41:44.45:0,44,685	0/0:26,0:24:38.59:0,39,629	0/0:22,0:21:28.81:0,29,466	0/0:27,0:27:43.71:0,44,632	0/1:18,0:17:18.43:18,0,188	0/0:39,0:38:53.73:0,54,820	0/0:21,0:21:12.26:0,12,298	0/0:13,0:13:11.51:0,12,211
chr10	92580370	.	CA	C	685.34	PASS	AB=0.732;AC=4;AF=0.071;AN=56;BaseQRankSum=14.686;DP=749;FS=0.000;HRun=2;HaplotypeScore=144.8835;InbreedingCoeff=-0.0886;MQ=50.41;MQ0=29;MQRankSum=-11.746;QD=8.46;ReadPosRankSum=10.147;VQSLOD=-0.1028;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:48.16:0,48,661	0/1:4,6:10:50.60:167,0,51	0/0:41,0:9:24.08:0,24,326	0/0:47,0:17:30.09:0,30,463	0/0:33,0:33:81.59:0,82,879	0/1:16,0:16:14.28:14,0,98	0/0:28,0:28:29.70:0,30,478	0/0:27,0:21:53.89:0,54,802	0/0:20,0:20:47.03:0,47,417	0/0:23,0:22:42.66:0,43,564	0/0:24,0:22:41.48:0,41,588	0/0:27,0:25:43.49:0,43,629	0/0:30,0:30:14.86:0,15,287	0/0:26,0:26:31.98:0,32,450	0/1:11,18:29:99:398,0,156	0/0:25,0:24:0.51:0,1,325	0/1:14,12:26:99:213,0,244	0/0:16,0:15:18.71:0,19,267	0/0:20,0:16:38.03:0,38,438	0/0:27,0:25:54.83:0,55,650	0/0:42,0:42:78.60:0,79,888	0/0:28,0:25:52.51:0,53,731	0/0:24,0:23:50.02:0,50,683	0/0:29,0:29:53.07:0,53,711	0/0:17,0:16:11.32:0,11,176	0/0:41,0:40:99:0,103,1094	0/0:24,0:24:46.75:0,47,437	0/0:13,0:13:25.83:0,26,263
chr10	92580371	.	AAC	A	1119	PASS	AB=0.956;AC=11;AF=0.196;AN=56;BaseQRankSum=17.046;DP=754;FS=1.200;HRun=0;HaplotypeScore=152.7113;InbreedingCoeff=-0.0381;MQ=50.51;MQ0=29;MQRankSum=-7.382;QD=5.09;ReadPosRankSum=15.656;VQSLOD=-0.4584;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:48.13:0,48,670	1/1:7,3:10:12.61:215,13,0	0/0:43,0:11:30.09:0,30,370	0/0:47,0:17:31.23:0,31,450	0/0:33,0:33:52.43:0,52,697	0/1:16,0:17:47.11:47,0,114	0/0:29,0:29:16.69:0,17,450	0/0:27,0:21:33.44:0,33,703	0/0:20,0:20:12.28:0,12,297	0/1:23,0:22:21.92:22,0,474	0/0:25,0:23:8.75:0,9,478	0/0:27,0:25:0.93:0,1,485	0/1:30,0:30:61.65:62,0,216	0/1:26,0:26:8.36:8,0,353	0/1:23,5:28:26.80:499,0,27	0/1:27,0:26:48.27:48,0,319	0/1:16,6:26:99:337,0,100	0/1:16,0:15:2.99:3,0,192	0/0:20,0:16:26.72:0,27,398	0/0:27,0:25:39.02:0,39,558	0/0:41,0:41:41.57:0,42,775	0/0:29,0:26:44.58:0,45,696	0/0:24,0:23:40.82:0,41,602	0/0:29,0:29:43.70:0,44,645	0/1:16,1:16:24.50:25,0,108	0/0:41,0:40:62.73:0,63,920	0/0:24,0:24:18.28:0,18,372	0/0:13,0:13:11.51:0,12,211
chr10	92580373	.	CA	C	787.96	PASS	AB=0.772;AC=5;AF=0.089;AN=56;BaseQRankSum=15.544;DP=764;FS=1.793;HRun=2;HaplotypeScore=150.1952;InbreedingCoeff=0.3322;MQ=50.29;MQ0=28;MQRankSum=-12.942;QD=9.16;ReadPosRankSum=8.342;VQSLOD=1.0107;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:39.11:0,39,524	1/1:4,6:10:13.63:154,14,0	0/0:44,0:12:32.96:0,33,406	0/0:50,0:19:24.25:0,24,514	0/0:31,0:31:75.60:0,76,836	0/1:19,0:19:2.49:2,0,161	0/0:31,0:31:40.90:0,41,581	0/0:27,0:21:53.58:0,54,795	0/0:17,0:17:38.07:0,38,363	0/0:25,0:24:44.34:0,44,623	0/0:24,0:22:41.01:0,41,541	0/0:27,0:25:40.58:0,41,540	0/0:30,0:30:18.19:0,18,272	0/0:25,0:25:31.91:0,32,444	0/1:12,18:30:23.50:447,0,23	0/0:28,0:27:11.60:0,12,413	0/1:15,12:27:97.98:298,0,98	0/0:17,0:16:21.64:0,22,300	0/0:22,0:18:43.13:0,43,499	0/0:29,0:27:57.80:0,58,657	0/0:41,0:41:65.19:0,65,765	0/0:28,0:25:55.42:0,55,748	0/0:24,0:23:50.01:0,50,676	0/0:30,0:30:55.60:0,56,719	0/0:16,0:15:5.29:0,5,98	0/0:40,0:39:96.77:0,97,1029	0/0:24,0:24:47.09:0,47,467	0/0:13,0:13:25.83:0,26,263
chr10	92580376	.	CA	C	414.14	PASS	AB=0.663;AC=4;AF=0.071;AN=56;BaseQRankSum=13.766;DP=764;FS=0.000;HRun=2;HaplotypeScore=150.7398;InbreedingCoeff=0.4314;MQ=51.65;MQ0=25;MQRankSum=-10.016;QD=6.00;ReadPosRankSum=4.818;VQSLOD=0.6940;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:35.14:0,35,451	1/1:5,6:11:27.68:121,28,0	0/0:52,0:18:34.45:0,34,547	0/0:53,0:22:46.27:0,46,630	0/0:31,0:31:74.62:0,75,797	0/0:19,0:19:12.67:0,13,234	0/0:31,0:31:42.64:0,43,608	0/0:29,0:24:72.22:0,72,935	0/0:17,0:17:35.06:0,35,322	0/0:25,0:24:53.48:0,53,713	0/0:22,0:20:38:0,38,512	0/0:26,0:24:35.07:0,35,487	0/0:29,0:29:22.38:0,22,324	0/0:25,0:25:32.40:0,32,448	0/1:12,18:30:15.29:210,0,15	0/0:28,0:27:32.36:0,32,478	0/1:16,12:28:85.66:198,0,86	0/0:18,0:17:23.42:0,23,325	0/0:23,0:19:49.61:0,50,581	0/0:29,0:27:60.85:0,61,731	0/0:38,0:38:66.37:0,66,755	0/0:28,0:25:56.67:0,57,752	0/0:24,0:24:54.03:0,54,734	0/0:27,0:27:56.48:0,56,732	0/0:15,0:14:5.30:0,5,81	0/0:38,0:37:92.63:0,93,979	0/0:24,0:24:41.08:0,41,404	0/0:13,0:13:25.83:0,26,263
chr10	92580377	.	A	AC	811.94	PASS	AB=0.763;AC=4;AF=0.071;AN=56;BaseQRankSum=10.179;DP=770;FS=2.286;HRun=1;HaplotypeScore=150.8593;InbreedingCoeff=0.5561;MQ=51.70;MQ0=25;MQRankSum=-7.511;QD=11.77;ReadPosRankSum=1.075;VQSLOD=2.3347;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:35.15:0,35,457	1/1:7,4:11:31.35:182,31,0	0/0:52,0:18:29.10:0,29,555	0/0:54,0:23:53.92:0,54,680	0/0:32,0:32:77.07:0,77,935	0/0:18,0:19:30.63:0,31,330	0/0:31,0:31:53.54:0,54,664	0/0:29,0:24:72.14:0,72,948	0/0:17,0:17:47.55:0,48,451	0/0:26,0:25:67.88:0,68,787	0/0:22,0:20:54.95:0,55,584	0/0:27,0:25:59.28:0,59,604	0/0:30,0:30:68.73:0,69,547	0/0:25,0:25:55.03:0,55,562	0/1:21,9:30:4.58:384,0,5	0/0:28,0:27:53.73:0,54,578	0/1:19,9:28:89.97:361,0,90	0/0:18,0:17:34.50:0,35,376	0/0:24,0:20:56.32:0,56,634	0/0:29,0:27:68.80:0,69,827	0/0:39,0:39:75.13:0,75,906	0/0:28,0:25:64.90:0,65,804	0/0:24,0:24:59.86:0,60,778	0/0:27,0:27:62.48:0,62,793	0/0:14,1:14:25.10:0,25,173	0/0:38,0:37:99:0,110,1201	0/0:22,0:22:53.57:0,54,534	0/0:13,0:13:32.77:0,33,339
chr10	92580379	.	CA	C	1097.28	PASS	AB=0.846;AC=6;AF=0.107;AN=56;BaseQRankSum=12.483;DP=780;FS=2.085;HRun=2;HaplotypeScore=149.3313;InbreedingCoeff=0.5726;MQ=52.24;MQ0=20;MQRankSum=-9.215;QD=12.19;ReadPosRankSum=1.031;VQSLOD=2.5740;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:30.19:0,30,306	1/1:4,7:11:29.89:251,30,0	0/0:53,0:19:40.86:0,41,656	0/0:55,1:25:37.52:0,38,818	0/0:32,0:32:73.85:0,74,824	0/0:19,0:19:14.32:0,14,240	0/0:31,0:31:46.56:0,47,614	0/0:29,0:25:75.24:0,75,999	0/0:18,0:18:41.07:0,41,387	0/0:26,0:26:60.24:0,60,740	0/1:22,0:20:3.28:3,0,479	0/0:30,0:28:35.01:0,35,594	0/0:31,0:31:31.68:0,32,420	0/0:25,0:25:34.98:0,35,487	1/1:12,18:30:4.05:544,4,0	0/0:28,0:27:38.12:0,38,492	0/1:15,12:27:36.40:420,0,36	0/0:18,0:17:23.13:0,23,321	0/0:23,0:21:50.83:0,51,616	0/0:30,0:28:60.86:0,61,662	0/0:41,0:41:70.60:0,71,859	0/0:28,0:25:49.83:0,50,718	0/0:24,0:24:55.95:0,56,738	0/0:29,0:29:61.54:0,62,816	0/0:15,0:15:7.93:0,8,124	0/0:36,0:36:81.09:0,81,931	0/0:22,0:22:41.08:0,41,404	0/0:13,0:13:25.83:0,26,263
chr10	92580380	.	A	AC	1374.64	PASS	AB=0.877;AC=7;AF=0.125;AN=56;BaseQRankSum=11.278;DP=793;FS=4.160;HRun=1;HaplotypeScore=154.0708;InbreedingCoeff=0.5230;MQ=52.30;MQ0=20;MQRankSum=-10.520;QD=12.06;ReadPosRankSum=1.105;VQSLOD=2.3957;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:31:35.31:0,35,369	1/1:7,4:11:32.60:317,33,0	0/0:52,0:20:51.09:0,51,682	0/0:55,0:25:65.70:0,66,875	0/0:32,0:32:84.98:0,85,967	0/1:18,1:19:6.39:6,0,311	0/0:31,0:31:53.74:0,54,670	0/0:29,0:25:75.24:0,75,1025	0/0:20,0:20:53.55:0,54,516	0/0:27,0:26:69.10:0,69,813	0/1:20,2:20:2.06:2,0,516	0/0:28,2:28:46.36:0,46,690	0/0:31,0:31:60.85:0,61,630	0/0:25,0:25:48.21:0,48,599	1/1:24,9:33:5.96:626,6,0	0/0:29,0:28:52.50:0,52,587	0/1:20,9:29:45.89:550,0,46	0/0:17,1:17:28.49:0,28,358	0/0:23,0:21:55.01:0,55,661	0/0:31,0:29:68.61:0,69,752	0/0:41,0:41:85.36:0,85,1015	0/0:27,1:25:53.65:0,54,765	0/0:25,0:25:59.99:0,60,784	0/0:29,0:29:65.78:0,66,857	0/0:14,1:15:19.80:0,20,209	0/0:38,0:38:87.28:0,87,1126	0/0:22,0:22:53.55:0,54,534	0/0:13,0:13:32.77:0,33,339
chr10	92580601	.	CAG	C	1231.67	PASS	AB=0.851;AC=15;AF=0.268;AN=56;BaseQRankSum=-3.175;DP=598;FS=38.184;HRun=0;HaplotypeScore=129.3633;InbreedingCoeff=0.5001;MQ=66.01;MQ0=2;MQRankSum=6.926;QD=7.70;ReadPosRankSum=3.910;VQSLOD=1.0523;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:0.47:0,0,1	0/0:13,0:13:5.98:0,6,48	0/0:25,0:18:3.01:0,3,45	0/0:34,0:22:2.89:0,3,45	1/1:6,8:15:17.88:179,18,0	0/0:14,0:14:3:0,3,27	0/0:23,0:23:9.97:0,10,62	0/0:30,0:30:23.88:0,24,193	0/1:10,15:28:5.21:272,0,5	0/0:19,0:18:36:0,36,387	0/0:10,0:10:3.01:0,3,44	0/0:27,0:27:13.54:0,14,120	0/0:26,0:26:14.98:0,15,137	0/0:29,0:36:3.42:0,3,27	0/0:26,0:27:11.38:0,11,108	0/1:15,1:16:18.27:18,0,87	0/0:23,0:22:5.92:0,6,40	0/0:17,0:17:21.27:0,21,198	1/1:13,5:19:23.08:208,23,0	1/1:6,10:17:20.89:214,21,0	1/1:13,9:23:23.76:228,24,0	0/0:20,0:27:9.86:0,10,142	0/0:15,0:15:9.01:0,9,93	0/0:28,0:28:5.03:0,5,32	0/0:16,0:16:0.47:0,0,1	1/1:9,2:14:20.47:148,20,0	0/1:22,0:20:12.95:70,0,13	1/1:2,3:5:6.02:67,6,0
chr10	92580640	.	C	CGA	613.79	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=4.954;DP=577;FS=51.649;HRun=0;HaplotypeScore=131.9169;InbreedingCoeff=0.3656;MQ=65.81;MQ0=7;MQRankSum=-4.336;QD=3.21;ReadPosRankSum=-3.243;VQSLOD=0.1805;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:13.12:36,0,13	1/1:5,0:5:8.94:109,9,0	0/0:26,0:17:33.01:0,33,552	0/0:26,0:14:38.98:0,39,502	0/0:28,0:27:66.04:0,66,871	1/1:19,0:19:1.64:25,2,0	0/0:20,0:20:23.32:0,23,103	0/1:17,0:17:30.10:102,0,30	0/0:22,0:22:47.99:0,48,636	0/0:27,0:26:73.89:0,74,901	0/0:17,0:17:30.06:0,30,384	0/1:22,0:22:3.54:4,0,125	0/0:19,0:19:7.12:0,7,316	0/0:19,0:19:21.55:0,22,283	1/1:4,21:24:13.91:204,14,0	0/1:16,0:15:36.86:107,0,37	1/1:4,15:20:11.97:140,12,0	0/1:14,0:14:33.33:33,0,301	0/0:22,0:21:54.13:0,54,730	0/0:31,0:31:78.26:0,78,1074	0/0:23,0:23:59.53:0,60,764	0/0:23,0:22:25.29:0,25,336	0/0:18,0:18:32.73:0,33,409	0/1:22,0:22:17.17:17,0,197	0/0:16,0:16:23.94:0,24,345	0/0:19,0:19:51.16:0,51,731	0/0:20,0:20:54.18:0,54,755	0/0:10,0:10:27.08:0,27,361
chr10	92580642	.	CAA	C	610.75	PASS	AB=0.546;AC=6;AF=0.107;AN=56;BaseQRankSum=5.599;DP=550;FS=9.945;HRun=2;HaplotypeScore=125.3824;InbreedingCoeff=0.5794;MQ=70.59;MQ0=7;MQRankSum=-3.251;QD=9.85;ReadPosRankSum=0.499;VQSLOD=-0.2667;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:56.28:0,56,1275	0/0:4,0:4:5:0,5,50	0/0:28,0:19:54.11:0,54,918	0/0:27,0:15:44.98:0,45,763	0/0:27,0:26:75.23:0,75,1280	1/1:1,13:15:5.99:67,6,0	1/1:1,17:18:14.94:374,15,0	0/1:1,0:13:5.46:196,0,5	0/0:20,0:20:50.96:0,51,799	0/0:28,0:27:78.25:0,78,1517	0/0:16,0:16:39.13:0,39,724	0/0:21,0:21:33.75:0,34,726	0/0:20,0:20:56.58:0,57,889	0/0:17,0:17:36.10:0,36,625	0/0:21,0:21:26.45:0,26,322	0/1:4,12:15:26.86:99,0,27	0/0:19,0:19:18:0,18,198	0/0:13,0:13:13.48:0,13,499	0/0:22,0:21:57.19:0,57,1058	0/0:30,0:30:87.29:0,87,1558	0/0:21,0:21:57.19:0,57,977	0/0:22,0:21:48.61:0,49,812	0/0:17,0:17:45.15:0,45,838	0/0:22,0:22:12.32:0,12,470	0/0:17,0:17:42.61:0,43,733	0/0:19,0:19:51.17:0,51,994	0/0:20,0:20:57.19:0,57,1083	0/0:10,0:10:27.06:0,27,458
chr10	92580649	.	G	GCGCGCA	982.40	PASS	AB=0.950;AC=6;AF=0.107;AN=56;BaseQRankSum=2.779;DP=563;FS=0.708;HRun=0;HaplotypeScore=169.6462;InbreedingCoeff=0.6092;MQ=73.14;MQ0=3;MQRankSum=-2.938;QD=13.64;ReadPosRankSum=-4.600;VQSLOD=1.8741;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.24:0,81,1880	0/0:5,0:5:9.03:0,9,220	0/0:28,0:21:63.19:0,63,1386	0/0:27,0:16:48.15:0,48,1096	0/0:26,0:26:75.26:0,75,1849	1/1:17,1:18:26.23:265,26,0	1/1:19,1:20:44.89:349,45,0	0/1:16,0:16:73.47:136,0,73	0/0:18,0:18:48.16:0,48,1225	0/0:25,0:25:75.26:0,75,1917	0/0:18,0:18:47.96:0,48,1078	0/0:20,0:20:45.17:0,45,1099	0/0:18,0:18:54.19:0,54,1324	0/0:19,0:19:41.77:0,42,939	0/0:21,0:21:18.24:0,18,542	0/1:16,2:17:47.01:370,0,47	0/0:22,0:22:33.09:0,33,664	0/0:12,0:13:31.48:0,31,666	0/0:21,0:21:60.21:0,60,1452	0/0:29,0:29:87.30:0,87,2215	0/0:19,0:19:45.63:0,46,1153	0/0:22,0:21:51:0,51,1192	0/0:19,0:19:48.16:0,48,1178	0/0:21,0:21:25.64:0,26,683	0/0:18,0:18:45.15:0,45,1100	0/0:19,0:19:57.19:0,57,1363	0/0:20,0:20:57.20:0,57,1454	0/0:13,0:13:33.06:0,33,736
chr10	92582257	.	T	TA	633.09	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.184;DP=387;FS=10.203;HRun=7;HaplotypeScore=42.2249;InbreedingCoeff=0.8552;MQ=63.83;MQ0=1;MQRankSum=-0.689;QD=19.18;ReadPosRankSum=1.326;VQSLOD=2.1931;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,99,932	1/1:0,1:1:3.01:36,3,0	0/0:14,0:13:29.39:0,29,262	0/0:12,0:10:19.75:0,20,176	0/0:20,0:20:57.09:0,57,550	0/0:17,0:17:45.03:0,45,421	0/0:7,0:7:15.02:0,15,145	0/0:26,0:26:60.09:0,60,579	0/0:7,0:7:12.02:0,12,116	0/0:10,0:10:24.03:0,24,232	0/0:11,0:11:30.03:0,30,283	0/0:14,0:14:30.05:0,30,290	0/0:3,0:3:9.01:0,9,87	0/0:9,0:9:27.04:0,27,261	1/1:1,6:7:12.04:145,12,0	0/0:11,0:11:30.05:0,30,290	1/1:4,21:25:48.15:580,48,0	0/0:20,0:19:51.03:0,51,483	0/0:20,0:19:48.07:0,48,464	0/0:20,0:20:39.04:0,39,371	0/0:13,0:13:30.05:0,30,290	0/0:5,0:5:9.01:0,9,87	0/0:8,0:8:15.02:0,15,145	0/0:6,0:6:18.03:0,18,174	0/0:12,0:12:33.05:0,33,319	0/0:23,0:22:60.09:0,60,579	0/0:15,0:15:36.02:0,36,336	0/0:10,0:10:30.05:0,30,290
chr10	92582872	.	G	GA	576.25	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.410;DP=696;FS=16.435;HRun=9;HaplotypeScore=75.6300;InbreedingCoeff=0.9841;MQ=81.10;MQ0=3;MQRankSum=0.189;QD=18.01;ReadPosRankSum=-0.703;VQSLOD=2.3672;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:32:40.33:671,40,0	0/0:7,0:7:21:0,21,182	0/0:66,0:37:25.65:0,26,309	0/0:58,2:31:19.79:0,20,315	0/0:19,0:19:50.99:0,51,442	0/0:25,0:25:71.97:0,72,620	0/0:19,1:20:20.78:0,21,406	0/0:27,1:28:35.76:0,36,532	0/0:25,0:25:71.95:0,72,617	0/0:26,0:26:71.94:0,72,618	0/0:17,0:17:41.95:0,42,359	0/0:17,0:17:47.94:0,48,407	0/0:22,0:23:58.99:0,59,496	0/0:17,0:17:41.97:0,42,364	0/0:29,0:29:83.98:0,84,729	0/0:26,1:27:38.71:0,39,548	0/0:29,0:29:77.98:0,78,677	0/0:24,1:25:38.69:0,39,552	0/0:22,0:22:59.93:0,60,508	0/0:24,0:24:48.86:0,49,418	0/0:13,0:13:35.97:0,36,308	0/0:18,0:18:44.98:0,45,389	0/0:18,0:18:41.99:0,42,364	0/0:13,0:13:38.97:0,39,334	0/0:23,0:23:59.95:0,60,517	0/0:30,0:30:70.99:0,71,600	0/0:29,1:30:44.74:0,45,610	0/0:11,0:11:32.99:0,33,286
chr10	92584195	.	T	TACACACAC	4827.80	PASS	AB=1.000;AC=45;AF=0.865;AN=52;BaseQRankSum=-1.433;DP=526;FS=2.737;HRun=0;HaplotypeScore=175.4696;InbreedingCoeff=0.3307;MQ=60.28;MQ0=4;MQRankSum=-2.320;QD=11.10;ReadPosRankSum=-1.696;VQSLOD=3.9292;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:24:35.79:64,0,36	1/1:9,0:8:3.01:89,3,0	./.	./.	1/1:15,0:15:6.02:107,6,0	0/0:7,0:10:2.37:0,2,8	0/0:23,0:28:14.93:0,15,296	1/1:23,0:23:11.25:120,11,0	1/1:12,2:16:3.01:122,3,0	1/1:23,0:22:27.07:805,27,0	1/1:15,0:19:3.01:104,3,0	1/1:22,0:21:8.27:128,8,0	1/1:19,0:18:12.04:258,12,0	1/1:14,0:14:6.02:171,6,0	1/1:19,0:17:3.01:55,3,0	0/0:10,0:12:11.94:0,12,149	1/1:20,0:17:13.76:432,14,0	1/1:15,0:14:18.57:601,19,0	1/1:17,0:15:3:28,3,0	1/1:29,0:29:7.83:171,8,0	1/1:16,0:16:3.01:42,3,0	1/1:24,0:24:2.66:99,3,0	1/1:22,0:21:3.01:66,3,0	1/1:22,0:22:6.02:188,6,0	1/1:17,0:17:8.71:262,9,0	1/1:18,0:21:17.89:345,18,0	1/1:10,4:16:2.90:121,3,0	1/1:11,0:11:15.94:449,16,0
chr10	92584241	.	C	CAG	276.14	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=10.480;DP=561;FS=34.317;HRun=0;HaplotypeScore=144.2268;InbreedingCoeff=0.3796;MQ=60.14;MQ0=11;MQRankSum=-2.771;QD=2.00;ReadPosRankSum=-2.349;VQSLOD=0.8073;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:24:0,24,213	1/1:7,0:6:11.93:93,12,0	0/0:24,0:16:38.12:0,38,405	0/0:22,0:15:41.98:0,42,422	0/0:23,0:22:2.12:0,2,214	0/0:18,0:18:27.70:0,28,344	0/0:21,0:21:46.21:0,46,402	0/0:21,0:21:16.04:0,16,336	0/0:19,0:19:10.60:0,11,161	0/1:22,0:21:7.46:7,0,253	0/0:19,0:19:18.56:0,19,240	0/0:26,0:25:16.24:0,16,210	0/0:16,0:15:19.97:0,20,143	0/0:20,0:20:20.39:0,20,170	1/1:8,16:22:3.01:54,3,0	0/0:20,0:20:56.83:0,57,463	1/1:19,0:16:27.84:176,28,0	0/0:26,0:25:18.15:0,18,377	0/0:17,0:15:32.98:0,33,291	0/1:23,0:23:17.82:18,0,147	0/0:19,0:19:13.45:0,13,229	0/0:18,0:18:23.93:0,24,191	0/0:19,0:18:16.16:0,16,207	0/0:19,0:19:0.85:0,1,98	0/0:22,0:22:20.05:0,20,263	0/1:29,0:29:62.63:63,0,281	0/0:13,0:13:18.07:0,18,170	0/1:13,0:13:13.53:14,0,85
chr10	92588205	.	T	TA	5031.47	PASS	AB=0.625;AC=27;AF=0.482;AN=56;BaseQRankSum=-5.432;DP=731;FS=2.802;HRun=12;HaplotypeScore=100.1954;InbreedingCoeff=0.8984;MQ=67.88;MQ0=3;MQRankSum=-1.715;QD=14.89;ReadPosRankSum=0.197;VQSLOD=5.1379;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,35:41:27.34:738,27,0	1/1:3,0:9:15.57:66,16,0	0/0:29,0:17:12.54:0,13,69	0/0:34,0:22:8.03:0,8,104	0/0:22,1:24:17.77:0,18,243	0/0:35,0:35:95.37:0,95,695	0/0:24,1:25:31.34:0,31,386	0/0:36,0:40:71.78:0,72,571	0/0:21,0:22:52.71:0,53,376	1/1:3,16:19:48.08:467,48,0	0/1:6,9:15:5.11:203,0,5	1/1:7,17:26:19.82:323,20,0	1/1:1,15:16:36.06:350,36,0	1/1:5,13:19:17.46:314,17,0	1/1:13,0:31:51.75:248,52,0	0/0:25,0:26:70.21:0,70,493	1/1:11,1:29:36.76:185,37,0	1/1:9,24:32:22.29:540,22,0	0/0:27,0:28:37.71:0,38,267	0/0:28,0:28:63.44:0,63,474	0/0:22,0:22:31.87:0,32,312	1/1:12,14:26:11.35:270,11,0	1/1:4,21:25:38.29:533,38,0	1/1:7,18:26:4.09:350,4,0	1/1:6,17:23:29.24:445,29,0	0/0:38,0:40:91.42:0,91,657	0/0:23,1:25:14.49:0,14,257	0/0:14,0:14:26.81:0,27,196
chr10	92589506	.	AT	A	1103.76	PASS	AB=0.781;AC=11;AF=0.204;AN=54;BaseQRankSum=-0.275;DP=527;FS=1.082;HRun=13;HaplotypeScore=71.5198;InbreedingCoeff=0.3248;MQ=72.57;MQ0=17;MQRankSum=0.500;QD=5.21;ReadPosRankSum=1.385;VQSLOD=2.2201;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,29:40:8.83:429,0,9	0/0:5,0:5:8.69:0,9,51	0/0:62,0:25:15.48:0,15,106	0/1:51,0:15:13.36:13,0,27	0/0:30,0:33:69.07:0,69,604	0/1:5,11:19:9.49:153,0,9	1/1:2,4:7:10.98:72,11,0	1/1:20,20:39:8.75:359,9,0	0/0:5,0:5:12.02:0,12,117	0/0:18,0:18:11.52:0,12,46	0/0:18,0:18:5.49:0,5,24	0/0:6,0:5:5.96:0,6,25	0/0:13,0:13:11.07:0,11,50	0/0:9,0:8:5.75:0,6,41	0/0:20,0:20:43.29:0,43,235	1/1:3,12:14:15.73:201,16,0	0/0:20,0:20:47.05:0,47,270	0/1:10,4:14:23.17:23,0,63	0/0:16,0:16:24.02:0,24,225	0/0:20,0:20:34.48:0,34,311	0/0:6,0:6:9:0,9,82	0/0:2,0:2:2.68:0,3,11	0/0:6,0:6:2.74:0,3,12	./.	0/1:23,0:24:3.21:3,0,77	0/0:20,0:19:7.12:0,7,201	0/0:24,0:23:42.04:0,42,401	0/0:8,0:9:14.84:0,15,125
chr10	92589507	.	T	TTTTTTTTA	3154.67	PASS	AB=0.864;AC=20;AF=0.370;AN=54;BaseQRankSum=-3.281;DP=527;FS=0.531;HRun=0;HaplotypeScore=124.5627;InbreedingCoeff=0.4241;MQ=72.38;MQ0=17;MQRankSum=-8.336;QD=16.10;ReadPosRankSum=-2.169;VQSLOD=2.6233;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:90.24:0,90,1726	0/0:5,0:5:5.05:0,5,94	0/0:62,0:25:18.63:0,19,285	0/0:51,0:14:9.10:0,9,76	0/0:33,0:33:72.04:0,72,1316	0/1:20,0:20:1.50:1,0,564	0/1:7,0:7:9.87:10,0,168	0/1:43,0:41:58.33:58,0,941	0/0:4,0:4:12.04:0,12,263	1/1:4,11:16:36.03:868,36,0	1/1:4,13:18:8.88:216,9,0	1/1:2,4:5:6.91:242,7,0	1/1:3,9:13:12.03:444,12,0	0/1:4,5:8:23.17:114,0,23	0/0:20,0:20:46.20:0,46,784	0/1:16,0:15:32.29:32,0,408	0/0:20,0:20:50.66:0,51,1037	1/1:13,0:13:26.79:462,27,0	0/0:15,0:15:33.08:0,33,604	0/0:21,0:21:44.38:0,44,668	0/0:5,0:5:9.03:0,9,206	1/1:2,0:2:3.01:38,3,0	1/1:4,2:6:2.96:120,3,0	./.	0/1:4,20:27:3.26:724,0,3	0/0:20,0:19:3.28:0,3,542	0/0:23,0:22:57.11:0,57,1062	0/0:10,0:10:6.08:0,6,335
chr10	92589744	.	G	GTAGA	4177.39	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.261;DP=566;FS=4.170;HRun=0;HaplotypeScore=85.6473;InbreedingCoeff=0.9948;MQ=73.28;MQ0=1;MQRankSum=-2.519;QD=55.70;ReadPosRankSum=1.786;VQSLOD=5.1530;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,2159	1/1:4,10:14:33.11:861,33,0	0/0:18,0:18:39.13:0,39,699	0/0:21,0:19:51.13:0,51,838	0/0:23,0:23:54.18:0,54,972	0/0:20,0:20:54.18:0,54,978	0/0:21,0:21:57.20:0,57,1049	0/0:27,0:27:69.19:0,69,1137	0/0:12,0:12:33.11:0,33,607	0/0:10,0:10:30.09:0,30,524	0/0:14,0:14:36.12:0,36,662	0/0:21,0:21:57.18:0,57,1018	0/0:17,0:17:42.14:0,42,773	0/0:16,0:16:45.15:0,45,821	1/1:6,24:30:57.20:1496,57,0	0/0:12,0:12:30.10:0,30,552	1/1:4,27:31:69.24:1821,69,0	0/0:21,0:21:60.20:0,60,1075	0/0:23,0:23:69.24:0,69,1262	0/0:22,0:22:66.23:0,66,1214	0/0:43,0:43:99:0,117,2122	0/0:8,0:8:18.03:0,18,271	0/0:11,0:11:30.08:0,30,499	0/0:22,0:22:60.21:0,60,1104	0/0:17,0:17:42.14:0,42,752	0/0:26,0:26:75.26:0,75,1377	0/0:18,0:18:45.15:0,45,828	0/0:7,0:7:21.07:0,21,386
chr10	92590468	.	G	GGAAA	60.14	PASS	AB=0.897;AC=4;AF=0.071;AN=56;BaseQRankSum=4.321;DP=419;FS=1.248;HRun=0;HaplotypeScore=88.0180;InbreedingCoeff=0.2948;MQ=65.31;MQ0=6;MQRankSum=1.666;QD=1.13;ReadPosRankSum=-3.299;VQSLOD=0.8841;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:37.92:0,38,305	1/1:4,0:4:9.01:109,9,0	0/0:19,0:11:16.67:0,17,270	0/0:14,0:6:14.81:0,15,121	0/0:17,0:16:28.86:0,29,355	0/0:16,0:16:27.03:0,27,308	0/0:21,0:21:45.87:0,46,405	0/0:21,0:21:40.54:0,41,341	0/0:16,0:16:33.02:0,33,444	0/0:7,0:7:1.13:0,1,80	0/0:8,0:8:8.69:0,9,109	0/0:13,0:13:17.39:0,17,144	0/0:8,0:8:11.70:0,12,101	0/1:26,0:24:12.52:13,0,138	0/0:11,0:11:5.16:0,5,34	0/0:14,0:14:24.01:0,24,265	0/1:17,2:22:39.12:44,0,39	0/0:16,0:15:17.99:0,18,195	0/0:11,0:11:30.08:0,30,460	0/0:13,0:13:17.76:0,18,331	0/0:14,0:13:20.96:0,21,288	0/0:16,0:15:14.70:0,15,133	0/0:9,0:9:8.85:0,9,86	0/0:16,0:15:19.76:0,20,153	0/0:14,0:14:25.85:0,26,206	0/0:18,0:18:33.05:0,33,437	0/0:18,0:17:41.99:0,42,514	0/0:12,0:11:23.90:0,24,265
chr10	92590469	.	G	GA	1591.67	PASS	AB=0.768;AC=34;AF=0.607;AN=56;BaseQRankSum=-0.067;DP=466;FS=3.558;HRun=15;HaplotypeScore=69.7235;InbreedingCoeff=0.3296;MQ=64.56;MQ0=6;MQRankSum=-1.335;QD=4.51;ReadPosRankSum=-2.474;VQSLOD=1.1538;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,14:25:25.17:193,25,0	1/1:1,0:5:8.56:43,9,0	0/0:17,0:11:12.39:0,12,63	0/0:13,0:6:0.70:0,1,25	0/1:14,1:17:22.26:22,0,33	0/1:10,7:17:39.76:56,0,40	0/1:12,9:23:27.39:82,0,27	1/1:14,7:21:2.88:115,3,0	0/1:16,1:18:2.79:3,0,90	1/1:2,6:8:14.88:115,15,0	0/1:5,5:10:3.19:61,0,3	1/1:12,0:12:8.95:68,9,0	1/1:2,7:9:11.72:100,12,0	1/1:19,7:25:14.46:184,14,0	1/1:10,1:18:10.39:69,10,0	0/1:5,10:15:18.04:83,0,18	1/1:26,0:26:28.37:147,28,0	0/1:8,10:17:23.87:31,0,24	0/0:11,0:13:22.71:0,23,113	0/0:11,0:15:9.72:0,10,93	0/1:16,0:15:3.37:3,0,74	1/1:9,7:15:9.79:65,10,0	1/1:7,5:12:6.37:43,6,0	1/1:6,17:22:14.49:126,14,0	1/1:5,9:15:16.21:167,16,0	0/0:17,0:19:15.28:0,15,83	0/0:21,0:21:16.17:0,16,95	0/0:12,0:11:4.97:0,5,34
chr10	92590691	.	AAAAAATAT	A	619.65	PASS	AB=0.770;AC=14;AF=0.304;AN=46;BaseQRankSum=-0.513;DP=186;FS=0.000;HRun=0;HaplotypeScore=35.5764;InbreedingCoeff=0.4603;MQ=52.87;MQ0=19;MQRankSum=-0.152;QD=13.18;ReadPosRankSum=1.525;VQSLOD=1.0663;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:8.24:0,8,90	./.	0/0:23,0:4:6:0,6,60	0/0:21,0:7:17.19:0,17,183	0/0:5,0:4:5.23:0,5,48	./.	./.	0/0:22,0:22:54.12:0,54,941	0/0:3,0:3:1.82:0,2,5	1/1:1,0:1:3.01:39,3,0	0/0:4,0:4:0:0,0,0	0/0:3,0:2:0:0,0,0	1/1:2,0:1:3.01:45,3,0	./.	0/0:4,0:4:7.08:0,7,43	0/0:3,0:1:3.01:0,3,58	0/0:21,0:16:24.97:0,25,371	0/1:4,23:27:3.41:344,0,3	0/1:4,0:4:0.03:0,0,2	./.	0/0:2,0:2:3.01:0,3,45	1/1:2,0:1:3.01:39,3,0	1/1:3,0:2:6.02:77,6,0	1/1:2,2:2:3.01:71,3,0	1/1:3,1:4:5.98:133,6,0	0/0:4,0:2:5.96:0,6,49	0/0:5,0:5:3.01:0,3,52	0/0:11,0:5:15.02:0,15,316
chr10	92590695	.	A	AT	478.13	PASS	AC=22;AF=0.458;AN=48;BaseQRankSum=-5.079;DP=173;FS=3.920;HRun=0;HaplotypeScore=22.8224;InbreedingCoeff=0.4970;MQ=54.42;MQ0=14;MQRankSum=3.388;QD=7.14;ReadPosRankSum=-0.206;VQSLOD=2.4042;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:5.56:0,6,25	./.	0/0:22,0:3:5.69:0,6,30	0/0:24,0:9:13.83:0,14,79	0/0:4,0:3:0.47:0,0,1	1/1:1,0:1:2.99:24,3,0	./.	1/1:13,10:23:22.44:346,22,0	0/0:3,0:3:0.47:0,0,1	1/1:1,0:1:2.68:11,3,0	0/0:4,0:4:0:0,0,0	0/0:2,0:1:0:0,0,0	0/0:2,0:1:2.97:0,3,20	./.	1/1:4,0:4:3.74:9,4,0	1/1:2,0:1:3:25,3,0	1/1:16,0:13:10.89:88,11,0	0/0:25,0:25:13.66:0,14,47	1/1:4,0:4:3.58:12,4,0	./.	0/0:2,0:2:2.98:0,3,21	1/1:2,0:1:2.60:10,3,0	1/1:3,0:2:5.19:19,5,0	0/0:3,0:2:2.68:0,3,11	0/0:3,0:3:4.74:0,5,17	1/1:3,0:2:2.92:18,3,0	0/0:3,0:3:2.99:0,3,24	1/1:7,0:4:11.32:57,11,0
chr10	92590920	.	ATAG	A	539.70	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=5.645;DP=245;FS=3.476;HRun=0;HaplotypeScore=34.5340;InbreedingCoeff=0.5787;MQ=77.43;MQ0=1;MQRankSum=0.918;QD=15.42;ReadPosRankSum=2.082;VQSLOD=2.7655;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:9:2.98:21,3,0	./.	0/0:15,0:9:7.84:0,8,118	0/0:13,0:12:12.04:0,12,211	0/0:7,0:7:12.04:0,12,243	0/0:13,0:13:33.11:0,33,668	0/0:3,0:3:6.02:0,6,110	0/0:40,0:40:66.23:0,66,1299	0/0:6,0:6:18.06:0,18,355	0/0:2,0:2:3.01:0,3,61	0/0:4,0:4:12.04:0,12,243	0/0:4,0:4:12.04:0,12,227	0/0:6,0:6:18.06:0,18,364	0/0:5,0:5:12.04:0,12,243	1/1:2,5:7:9.03:128,9,0	0/0:4,0:4:9.03:0,9,182	1/1:4,15:19:36.12:513,36,0	0/0:30,1:31:32.47:0,32,1321	0/0:15,0:15:33.03:0,33,557	0/0:3,0:3:6.02:0,6,110	0/0:6,0:6:17.89:0,18,302	0/0:1,0:1:3.01:0,3,61	0/0:1,0:1:3.01:0,3,50	0/0:4,0:4:3.01:0,3,61	0/0:8,0:8:24.08:0,24,461	0/0:7,0:7:21.07:0,21,418	0/0:5,0:5:12.04:0,12,213	0/0:6,0:6:18.06:0,18,365
chr10	92591304	.	GCA	G	2773.80	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.352;DP=782;FS=0.988;HRun=0;HaplotypeScore=88.8367;InbreedingCoeff=0.9985;MQ=90.61;MQ0=1;MQRankSum=-2.934;QD=33.83;ReadPosRankSum=5.018;VQSLOD=5.6284;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,2039	1/1:0,10:9:21.07:309,21,0	0/0:25,0:25:75.25:0,75,1333	0/0:38,0:36:93.30:0,93,1676	0/0:31,0:31:87.26:0,87,1537	0/0:29,0:29:84.27:0,84,1541	0/0:22,0:22:66.23:0,66,1221	0/0:40,0:40:99:0,114,2118	0/0:23,0:23:69.21:0,69,1242	0/0:37,0:37:99:0,108,1964	0/0:20,0:20:60.21:0,60,1121	0/0:24,0:24:66.19:0,66,1194	0/0:35,0:35:99:0,105,1942	0/0:33,0:33:96.33:0,96,1797	1/1:3,30:33:81.27:1193,81,0	0/0:29,0:29:84.29:0,84,1567	1/1:0,39:39:96.32:1414,96,0	0/0:18,0:18:54.19:0,54,1011	0/0:24,0:24:63.22:0,63,1169	0/0:21,0:21:63.22:0,63,1179	0/0:51,0:51:99:0,151,2791	0/0:27,0:27:72.25:0,72,1345	0/0:12,0:12:36.12:0,36,673	0/0:29,0:29:81.28:0,81,1506	0/0:28,0:28:84.29:0,84,1573	0/0:25,0:25:66.22:0,66,1207	0/0:23,0:23:69.24:0,69,1291	0/0:18,0:18:54.19:0,54,1004
chr10	92591955	.	G	GT	2778.72	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.000;DP=596;FS=5.630;HRun=1;HaplotypeScore=57.9195;InbreedingCoeff=0.9927;MQ=66.01;MQ0=0;MQRankSum=-2.012;QD=39.14;ReadPosRankSum=1.175;VQSLOD=4.2092;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.28:0,96,1216	1/1:2,10:12:36.08:496,36,0	0/0:27,0:27:72.23:0,72,928	0/0:22,0:22:63.20:0,63,804	0/0:14,0:14:42.14:0,42,545	0/0:26,0:26:75.23:0,75,957	0/0:20,0:20:57.18:0,57,739	0/0:31,0:31:90.27:0,90,1152	0/0:16,0:16:45.14:0,45,572	0/0:18,0:18:51.17:0,51,662	0/0:5,0:5:15.05:0,15,195	0/0:22,0:22:66.20:0,66,842	0/0:13,0:13:33.11:0,33,428	0/0:27,0:27:81.26:0,81,1051	1/1:0,23:23:69.23:1034,69,0	0/0:23,0:23:69.22:0,69,884	1/1:1,35:36:93.31:1392,93,0	0/0:24,0:23:69.20:0,69,879	0/0:22,0:22:66.21:0,66,856	0/0:14,0:14:42.14:0,42,543	0/0:37,0:37:99:0,108,1388	0/0:14,0:14:36.12:0,36,463	0/0:13,0:13:39.11:0,39,492	0/0:29,0:29:84.27:0,84,1091	0/0:15,0:15:45.11:0,45,553	0/0:25,0:25:75.24:0,75,974	0/0:28,0:28:81.20:0,81,1011	0/0:7,0:7:21.07:0,21,273
chr10	92592017	.	C	CA	1747.04	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-2.837;DP=611;FS=8.731;HRun=6;HaplotypeScore=60.6851;InbreedingCoeff=0.9989;MQ=65.26;MQ0=1;MQRankSum=-1.924;QD=29.12;ReadPosRankSum=0.202;VQSLOD=3.9737;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:88.90:0,89,903	1/1:2,9:11:27.04:322,27,0	0/0:19,0:15:42.08:0,42,420	0/0:16,0:15:25.76:0,26,339	0/0:31,0:31:87.17:0,87,880	0/0:30,0:30:81.18:0,81,826	0/0:15,0:15:39.08:0,39,398	0/0:33,0:33:84.18:0,84,856	0/0:13,0:13:36.08:0,36,367	0/0:27,0:27:75.16:0,75,764	0/0:16,0:16:48.11:0,48,490	0/0:17,0:17:51.12:0,51,520	0/0:14,0:14:33.07:0,33,336	0/0:29,0:29:71.19:0,71,710	1/1:1,23:24:60.19:753,60,0	0/0:15,0:15:45.09:0,45,452	1/1:5,20:25:66.20:815,66,0	0/0:19,0:19:57.13:0,57,581	0/0:26,0:26:75.17:0,75,765	0/0:30,0:30:81.14:0,81,816	0/0:14,0:14:33.05:0,33,330	0/0:18,0:18:48.11:0,48,490	0/0:19,0:19:57.11:0,57,573	0/0:19,0:19:45.10:0,45,459	0/0:19,0:19:57.12:0,57,576	0/0:28,0:28:78.18:0,78,796	0/0:32,0:32:93.18:0,93,940	0/0:18,0:18:54.12:0,54,551
chr10	92592445	.	CTTGGCAAGGG	C	4101.71	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.919;DP=792;FS=1.873;HRun=0;HaplotypeScore=236.0461;InbreedingCoeff=0.9958;MQ=90.78;MQ0=0;MQRankSum=-11.280;QD=70.72;ReadPosRankSum=2.427;VQSLOD=3.0600;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,4882	1/1:0,7:7:21.07:700,21,0	0/0:35,0:35:99:0,102,4524	0/0:32,0:32:87.26:0,87,3926	0/0:23,0:23:60.21:0,60,2879	0/0:25,0:25:69.24:0,69,3452	0/0:26,0:26:78.25:0,78,3764	0/0:31,0:31:84.29:0,84,3623	0/0:42,0:42:99:0,120,5962	0/0:25,0:25:60.21:0,60,2908	0/0:19,0:19:51.17:0,51,2592	0/0:34,0:34:93.32:0,93,4880	0/0:30,0:30:87.28:0,87,4214	0/0:22,0:22:66.23:0,66,3325	1/1:2,35:37:93.32:2604,93,0	0/0:34,0:34:99:0,102,5189	1/1:2,12:14:22.27:797,22,0	0/0:11,0:11:30.10:0,30,1503	0/0:21,0:21:60.21:0,60,2767	0/0:31,0:31:75.26:0,75,3796	0/0:52,0:52:99:0,154,7380	0/0:22,0:22:60.19:0,60,2604	0/0:31,0:31:81.26:0,81,3820	0/0:48,0:48:99:0,141,6811	0/0:18,0:18:51.17:0,51,2300	0/0:35,0:35:96.31:0,96,4241	0/0:44,0:43:99:0,123,6439	0/0:7,0:7:21.07:0,21,1121
chr10	92592663	.	A	ATGAGCCGC	5402.79	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.997;DP=816;FS=26.411;HRun=0;HaplotypeScore=197.2269;InbreedingCoeff=0.9997;MQ=76.90;MQ0=1;MQRankSum=-11.452;QD=66.70;ReadPosRankSum=0.322;VQSLOD=3.2576;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,157,4001	1/1:3,8:13:30.06:1169,30,0	0/0:21,0:21:41.90:0,42,861	0/0:16,0:16:35.37:0,35,807	0/0:31,0:31:90.26:0,90,2233	0/0:31,0:31:84.27:0,84,2233	0/0:25,0:25:69.22:0,69,1769	0/0:30,0:30:75.24:0,75,1830	0/0:23,0:23:63.22:0,63,1710	0/0:30,0:30:90.27:0,90,2214	0/0:22,0:22:54.15:0,54,1379	0/0:35,0:35:99:0,99,2296	0/0:41,0:41:99:0,117,2958	0/0:27,0:27:69.19:0,69,1736	1/1:10,20:38:71.86:2133,72,0	0/0:42,0:42:99:0,123,3095	1/1:6,17:29:51.13:2101,51,0	0/0:25,0:25:60.18:0,60,1566	0/0:20,0:20:57.16:0,57,1223	0/0:32,0:32:87.28:0,87,2308	0/0:44,0:44:99:0,123,3019	0/0:22,0:22:57.18:0,57,1341	0/0:25,0:25:72.22:0,72,1815	0/0:48,0:48:99:0,138,3459	0/0:17,0:17:48.15:0,48,1203	0/0:23,0:23:63.21:0,63,1614	0/0:39,0:39:99:0,105,2585	0/0:12,0:12:33.11:0,33,761
chr10	92593843	.	AATATATT	A	3005.47	PASS	AC=16;AF=0.308;AN=52;BaseQRankSum=7.291;DP=262;FS=0.000;HRun=0;HaplotypeScore=63.2785;InbreedingCoeff=0.7678;MQ=64.67;MQ0=0;MQRankSum=-9.032;QD=34.15;ReadPosRankSum=3.233;VQSLOD=3.1929;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:18.06:0,18,669	0/0:2,0:3:3.01:0,3,92	0/0:4,0:2:6.02:0,6,110	0/0:5,0:4:5.85:0,6,62	0/0:8,0:8:12.04:0,12,452	0/0:14,0:14:24.08:0,24,904	0/0:4,0:4:6.02:0,6,226	0/0:36,0:36:45.15:0,45,1476	0/0:5,0:5:6.02:0,6,222	1/1:11,5:16:15.05:354,15,0	1/1:2,4:6:12.04:283,12,0	1/1:1,5:6:15.05:354,15,0	1/1:1,3:4:6.02:141,6,0	1/1:3,8:11:21.07:496,21,0	0/0:2,0:4:3.01:0,3,92	0/0:4,0:4:6.02:0,6,226	0/0:16,0:21:18.02:0,18,273	1/1:9,13:22:33.11:780,33,0	0/0:18,0:18:39.13:0,39,1459	0/0:8,0:8:6.02:0,6,226	0/0:3,0:3:9.03:0,9,332	./.	1/1:4,3:7:9.03:213,9,0	./.	1/1:5,11:16:24.08:567,24,0	0/0:8,0:8:9.03:0,9,310	0/0:6,0:6:12.04:0,12,385	0/0:10,0:10:15.05:0,15,534
chr10	92593992	.	A	AT	1927.14	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.805;DP=471;FS=12.868;HRun=0;HaplotypeScore=47.5530;InbreedingCoeff=0.9344;MQ=75.64;MQ0=0;MQRankSum=-2.620;QD=41.89;ReadPosRankSum=1.896;VQSLOD=3.0120;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.25:0,81,1110	1/1:0,2:2:6.02:96,6,0	0/0:9,0:10:10.96:0,11,234	0/0:10,0:10:14.08:0,14,175	0/0:12,0:12:36.12:0,36,503	0/0:26,0:26:75.25:0,75,1048	0/0:13,0:13:39.12:0,39,523	0/0:28,0:28:84.27:0,84,1159	0/0:16,0:16:48.15:0,48,654	0/0:12,0:12:36.12:0,36,503	0/0:12,0:12:36.12:0,36,504	0/0:15,0:15:42.14:0,42,580	0/0:12,0:12:36.12:0,36,503	0/0:12,0:12:36.12:0,36,503	1/1:0,14:14:39.13:624,39,0	0/0:15,0:15:45.15:0,45,629	1/1:0,30:30:84.29:1342,84,0	0/0:22,0:22:63.18:0,63,859	0/0:18,0:18:54.18:0,54,753	0/0:8,0:8:24.08:0,24,336	0/0:65,0:65:99:0,190,2624	0/0:15,0:15:42.14:0,42,587	0/0:17,0:17:51.16:0,51,692	0/0:16,0:16:48.16:0,48,671	0/0:10,0:10:30.10:0,30,420	0/0:13,0:13:39.13:0,39,545	0/0:15,0:15:45.15:0,45,624	0/0:5,0:5:15.05:0,15,210
chr10	92594242	.	G	GA	10184.67	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-14.211;DP=648;FS=1.412;HRun=9;HaplotypeScore=58.7247;InbreedingCoeff=0.9988;MQ=86.11;MQ0=0;MQRankSum=-4.658;QD=24.96;ReadPosRankSum=4.317;VQSLOD=5.4372;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:34:55.16:837,55,0	1/1:2,8:10:24.02:252,24,0	0/0:15,0:15:32.66:0,33,262	0/0:27,0:27:53.81:0,54,449	0/0:37,0:37:95.98:0,96,833	1/1:5,19:24:48.13:531,48,0	1/1:4,14:19:38.94:412,39,0	1/1:7,18:25:51.08:541,51,0	0/0:17,0:17:47.98:0,48,417	1/1:3,19:22:54.15:597,54,0	1/1:1,9:11:20.89:213,21,0	1/1:4,16:21:44.95:477,45,0	1/1:3,15:18:45.12:498,45,0	1/1:4,26:30:66.18:730,66,0	1/1:0,23:23:60.16:664,60,0	1/1:3,19:22:57.15:631,57,0	1/1:5,28:34:69.02:744,69,0	1/1:6,26:32:72.19:794,72,0	0/0:16,0:16:44.99:0,45,391	0/0:22,1:23:29.80:0,30,488	0/0:25,0:26:71.02:0,71,605	1/1:3,17:20:48.13:531,48,0	1/1:0,16:16:45.12:498,45,0	1/1:2,28:30:52.15:804,52,0	1/1:2,15:17:39.11:431,39,0	0/0:26,0:26:68.98:0,69,599	0/0:44,0:44:99:0,126,1089	0/0:9,0:9:26.99:0,27,234
chr10	92594713	.	CGAGAGAGAGA	C	3865.08	PASS	AB=0.727;AC=17;AF=0.340;AN=50;BaseQRankSum=4.363;DP=661;FS=2.896;HRun=0;HaplotypeScore=223.4266;InbreedingCoeff=0.7248;MQ=56.85;MQ0=9;MQRankSum=-7.815;QD=17.18;ReadPosRankSum=6.037;VQSLOD=2.3830;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:41:15.44:0,15,387	./.	0/0:20,0:10:9.03:0,9,265	0/0:25,0:11:6.49:0,6,237	0/0:19,0:27:25.90:0,26,1050	0/0:25,0:28:51.16:0,51,2213	0/0:26,0:37:75.24:0,75,2926	0/0:31,0:27:25.32:0,25,995	0/0:18,0:25:39.61:0,40,1563	1/1:20,8:31:45.14:1178,45,0	1/1:9,5:14:0.47:2,0,0	1/1:12,16:30:18.53:542,19,0	1/1:14,10:25:24.08:701,24,0	1/1:12,12:25:18.06:521,18,0	./.	0/0:25,0:31:54.16:0,54,2436	./.	0/1:15,9:24:99:430,0,159	0/0:14,0:16:12.03:0,12,451	0/0:17,0:19:36.58:0,37,1509	0/0:21,0:33:39.13:0,39,1617	1/1:18,15:33:2.96:90,3,0	0/0:13,6:18:0.04:0,0,0	1/1:14,8:22:2.69:90,3,0	1/1:8,11:20:12.04:313,12,0	0/0:19,0:29:5.22:0,5,2217	0/0:26,0:30:63.22:0,63,2806	0/0:17,0:22:33.11:0,33,1236
chr10	92594994	.	AT	A	1068.35	PASS	AB=0.967;AC=10;AF=0.179;AN=56;BaseQRankSum=6.228;DP=561;FS=1.597;HRun=12;HaplotypeScore=73.5729;InbreedingCoeff=0.7547;MQ=71.50;MQ0=16;MQRankSum=-1.999;QD=9.13;ReadPosRankSum=-0.616;VQSLOD=2.7590;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:38:77.21:0,77,972	0/0:10,0:10:7.78:0,8,45	0/0:42,0:14:17.63:0,18,119	0/0:32,0:14:4.82:0,5,73	0/0:30,0:30:74.97:0,75,733	1/1:3,15:18:30.05:268,30,0	1/1:2,14:16:29.88:231,30,0	1/1:7,22:29:62.41:470,62,0	0/0:6,0:6:18.04:0,18,182	0/0:31,1:32:53.72:0,54,690	0/0:12,0:11:23.94:0,24,220	0/0:8,0:9:23.86:0,24,215	0/0:15,0:15:39.05:0,39,379	0/0:12,0:14:32.85:0,33,301	0/1:23,0:23:24.05:38,0,24	1/1:0,15:16:31.61:223,32,0	0/0:28,0:28:39.71:0,40,134	0/0:23,0:22:28.47:0,28,418	0/0:18,0:18:35.66:0,36,338	0/0:16,0:15:32.97:0,33,311	0/0:14,0:13:33.04:0,33,325	0/0:17,0:17:45.08:0,45,446	0/1:12,1:14:1.45:1,0,184	0/0:13,0:13:35.89:0,36,339	0/0:25,0:26:62.93:0,63,606	0/0:16,1:16:29.19:0,29,348	0/0:20,0:20:50.81:0,51,448	0/0:9,0:10:29.88:0,30,279
chr10	92595622	.	CAGA	C	2952.59	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.568;DP=676;FS=1.022;HRun=0;HaplotypeScore=99.0889;InbreedingCoeff=0.9969;MQ=85.24;MQ0=0;MQRankSum=-3.603;QD=40.45;ReadPosRankSum=-0.304;VQSLOD=4.4768;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,2746	1/1:1,6:7:18.02:276,18,0	0/0:37,0:37:96.21:0,96,1977	0/0:23,0:23:59.01:0,59,1184	0/0:31,0:31:90.31:0,90,2036	0/0:19,0:19:54.19:0,54,1226	0/0:30,0:30:90.28:0,90,2009	0/0:31,0:31:87.30:0,87,1979	0/0:22,0:22:63.22:0,63,1452	0/0:30,0:30:87.21:0,87,1996	0/0:18,0:18:54.19:0,54,1244	0/0:17,0:17:51.16:0,51,1070	0/0:25,0:25:75.26:0,75,1730	0/0:21,0:21:63.22:0,63,1436	1/1:1,33:34:87.25:1452,87,0	0/0:17,0:17:51.18:0,51,1176	1/1:2,30:32:80.50:1366,80,0	0/0:30,0:30:84.29:0,84,1913	0/0:11,0:11:33.07:0,33,697	0/0:23,0:23:66.23:0,66,1508	0/0:24,0:24:69.24:0,69,1572	0/0:27,0:27:81.28:0,81,1867	0/0:15,0:15:45.15:0,45,1038	0/0:29,0:29:87.28:0,87,1962	0/0:12,0:12:36.12:0,36,831	0/0:26,0:26:75.26:0,75,1716	0/0:28,0:27:78.25:0,78,1755	0/0:16,0:16:48.16:0,48,1107
chr10	92595803	.	G	GA	2053.36	PASS	AB=0.917;AC=9;AF=0.161;AN=56;BaseQRankSum=-11.096;DP=652;FS=12.659;HRun=9;HaplotypeScore=62.8717;InbreedingCoeff=0.9052;MQ=75.77;MQ0=0;MQRankSum=0.603;QD=19.56;ReadPosRankSum=-0.834;VQSLOD=2.8251;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,111,963	0/1:10,1:11:3.20:3,0,204	0/0:35,0:32:35.86:0,36,502	0/0:17,0:16:24.89:0,25,206	0/0:27,0:27:68.98:0,69,598	1/1:1,19:20:48.13:531,48,0	1/1:2,18:20:48.13:531,48,0	1/1:6,21:27:65.22:685,65,0	0/0:19,0:19:44.98:0,45,390	0/0:42,0:42:99:0,117,1015	0/0:14,0:14:38.98:0,39,338	0/0:18,1:19:47.98:0,48,417	0/0:19,0:19:44.98:0,45,390	0/0:29,0:29:77.96:0,78,677	0/0:27,0:27:74.97:0,75,650	1/1:5,22:27:42.11:465,42,0	0/0:23,0:23:68.99:0,69,599	0/0:13,0:13:35.97:0,36,308	0/0:18,0:20:49.06:0,49,402	0/0:22,0:22:62.99:0,63,547	0/0:18,0:18:44.98:0,45,390	0/0:20,0:20:53.99:0,54,469	0/0:12,0:12:32.99:0,33,286	0/0:24,0:24:65.98:0,66,573	0/0:29,0:29:83.98:0,84,729	0/0:28,0:28:77.95:0,78,673	0/0:41,0:41:92.92:0,93,802	0/0:7,0:7:17.99:0,18,156
chr10	92596406	.	GA	G	450.36	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.756;DP=535;FS=3.700;HRun=3;HaplotypeScore=50.3522;InbreedingCoeff=0.9944;MQ=68.47;MQ0=0;MQRankSum=-1.396;QD=26.49;ReadPosRankSum=2.322;VQSLOD=2.7531;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:42.14:545,42,0	0/0:15,0:15:45.15:0,45,674	0/0:15,0:13:39.13:0,39,548	0/0:11,0:11:24.08:0,24,342	0/0:28,0:28:84.26:0,84,1220	0/0:19,0:19:57.19:0,57,853	0/0:21,0:21:63.20:0,63,925	0/0:32,0:32:96.30:0,96,1385	0/0:15,0:15:45.15:0,45,673	0/0:29,0:29:84.27:0,84,1238	0/0:28,0:28:84.28:0,84,1258	0/0:19,0:19:54.18:0,54,802	0/0:19,0:19:57.17:0,57,824	0/0:16,0:16:48.16:0,48,718	0/0:16,0:16:45.14:0,45,653	0/0:19,0:19:54.17:0,54,791	0/0:20,0:20:60.19:0,60,876	0/0:17,0:17:51.17:0,51,763	0/0:22,0:22:63.09:0,63,924	0/0:31,0:31:93.29:0,93,1353	0/0:8,0:8:24.08:0,24,358	0/0:12,0:12:33.10:0,33,475	0/0:21,0:21:60.20:0,60,898	0/0:9,0:9:27.08:0,27,384	0/0:17,0:17:51.15:0,51,724	0/0:20,0:20:60.20:0,60,875	0/0:27,0:27:78.25:0,78,1146	0/0:12,0:12:36.12:0,36,540
chr10	92596639	.	AG	A	6752.80	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=12.684;DP=554;FS=3.906;HRun=2;HaplotypeScore=53.3488;InbreedingCoeff=0.9947;MQ=74.84;MQ0=0;MQRankSum=-1.761;QD=36.50;ReadPosRankSum=2.551;VQSLOD=5.4464;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,2027	0/0:5,0:5:15.05:0,15,225	0/0:8,0:8:24.01:0,24,313	0/0:12,0:13:30.10:0,30,432	0/0:18,0:18:54.18:0,54,809	0/0:19,0:19:51.17:0,51,764	0/0:31,0:31:93.30:0,93,1373	0/0:20,0:20:60.19:0,60,882	0/0:23,0:23:69.21:0,69,995	1/1:1,17:18:51.16:648,51,0	1/1:0,6:6:18.06:234,18,0	1/1:0,25:25:75.24:974,75,0	1/1:0,21:21:54.18:699,54,0	1/1:0,24:24:72.23:935,72,0	0/0:24,0:24:72.21:0,72,1036	0/0:15,0:15:45.15:0,45,675	0/0:18,0:18:54.18:0,54,806	1/1:4,27:31:36.31:965,36,0	0/0:16,0:16:48.16:0,48,718	0/0:15,0:15:45.15:0,45,673	0/0:48,0:48:99:0,141,2066	1/1:0,12:12:36.12:467,36,0	1/1:0,13:13:36.12:467,36,0	1/1:0,22:22:66.21:857,66,0	1/1:0,13:13:39.13:506,39,0	0/0:22,1:23:30.24:0,30,926	0/0:20,0:20:60.20:0,60,899	0/0:6,0:6:18.06:0,18,270
chr10	92598482	.	TACCTCC	T	12657.16	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=15.901;DP=577;FS=0.707;HRun=0;HaplotypeScore=150.5140;InbreedingCoeff=0.9890;MQ=82.99;MQ0=0;MQRankSum=-16.399;QD=45.86;ReadPosRankSum=2.729;VQSLOD=4.9051;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,21:28:51.17:1174,51,0	0/0:9,0:9:24.07:0,24,761	0/0:23,0:23:53.97:0,54,1840	0/0:21,0:21:54.18:0,54,1498	0/0:21,0:21:63.22:0,63,2123	1/1:3,17:20:39.13:899,39,0	1/1:4,21:24:45.15:1037,45,0	1/1:6,28:34:84.22:1705,84,0	0/0:16,0:16:48.15:0,48,1567	1/1:5,15:20:45.11:944,45,0	1/1:1,8:9:18.06:414,18,0	1/1:1,17:18:39.13:899,39,0	1/1:0,11:11:27.09:622,27,0	1/1:0,14:14:39.13:898,39,0	0/0:36,0:36:99:0,108,3650	1/1:2,19:21:54.19:1244,54,0	0/0:36,0:36:87.28:0,87,2959	1/1:1,4:6:8.98:207,9,0	0/0:20,0:20:54.18:0,54,1811	0/0:12,0:12:36.11:0,36,1179	0/0:45,0:45:99:0,129,4491	1/1:0,17:17:33.11:754,33,0	1/1:7,10:17:18.53:412,19,0	1/1:3,18:21:30.10:690,30,0	1/1:0,15:15:33.11:759,33,0	0/0:23,0:23:66.23:0,66,2315	0/0:31,0:31:87.28:0,87,2955	0/0:8,0:8:24.08:0,24,823
chr10	92598624	.	TAC	T	1574.81	PASS	AB=1.000;AC=27;AF=0.519;AN=52;BaseQRankSum=-1.718;DP=449;FS=0.000;HRun=0;HaplotypeScore=87.1197;InbreedingCoeff=0.7085;MQ=55.62;MQ0=5;MQRankSum=4.733;QD=7.43;ReadPosRankSum=2.725;VQSLOD=2.9771;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:5.54:0,6,62	0/0:3,0:2:0.47:0,0,1	./.	./.	1/1:6,8:15:20.89:214,21,0	1/1:17,0:17:15.19:72,15,0	1/1:16,0:16:8.10:35,8,0	0/0:24,0:23:8.17:0,8,35	1/1:9,11:20:11.82:113,12,0	0/0:15,0:15:15.26:0,15,171	0/1:8,0:8:0.98:1,0,22	0/0:14,0:16:7.91:0,8,77	0/0:14,0:14:6.01:0,6,56	0/0:7,0:7:2.96:0,3,19	1/1:16,0:16:8.35:62,8,0	1/1:11,0:11:8.20:37,8,0	1/1:17,0:17:3.71:103,4,0	0/0:16,0:16:13.38:0,13,129	1/1:5,1:6:8.32:98,8,0	1/1:13,1:14:10.82:93,11,0	1/1:14,1:14:12.03:129,12,0	0/0:12,0:10:5.98:0,6,49	0/0:11,0:11:6:0,6,52	0/0:22,0:21:6.01:0,6,66	0/0:10,0:16:8.91:0,9,77	1/1:15,3:18:26.43:222,26,0	1/1:8,15:25:26.90:278,27,0	1/1:5,9:13:27.54:301,28,0
chr10	92598658	.	CACAT	C	1730.98	PASS	AB=0.990;AC=27;AF=0.482;AN=56;BaseQRankSum=-1.747;DP=465;FS=0.473;HRun=0;HaplotypeScore=106.3458;InbreedingCoeff=0.0693;MQ=46.41;MQ0=13;MQRankSum=-1.006;QD=5.46;ReadPosRankSum=-2.727;VQSLOD=1.6632;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:13.62:0,14,215	1/1:3,0:2:2.99:23,3,0	0/0:26,0:6:4.26:0,4,96	0/0:22,0:5:8.13:0,8,99	0/1:20,0:20:4.85:5,0,262	1/1:12,3:15:36.39:433,36,0	1/1:18,2:19:35.42:364,35,0	0/1:30,0:28:23.70:349,0,24	0/1:15,1:16:35.46:35,0,90	0/1:20,0:19:27.48:27,0,448	0/1:7,0:7:7.87:8,0,81	0/0:12,0:12:20.96:0,21,251	0/1:14,0:14:2.39:2,0,152	1/1:2,0:2:0.47:1,0,0	1/1:15,0:15:5.89:124,6,0	1/1:0,12:12:9.50:155,10,0	1/1:22,1:22:18.39:254,18,0	0/1:17,0:17:12.07:12,0,206	0/0:18,0:18:33.95:0,34,284	0/1:16,0:16:32.30:32,0,156	0/1:12,0:13:1.74:2,0,165	0/0:11,0:9:3:0,3,75	0/1:16,0:14:1.01:1,0,204	0/1:20,0:19:9.52:10,0,118	0/0:15,0:15:20.85:0,21,313	0/1:17,0:16:55.56:56,0,154	0/1:21,0:21:4.30:4,0,176	0/0:15,0:15:13.65:0,14,289
chr10	92598660	.	CAT	C	2406.16	PASS	AB=0.992;AC=29;AF=0.518;AN=56;BaseQRankSum=0.761;DP=460;FS=2.722;HRun=0;HaplotypeScore=92.3730;InbreedingCoeff=-0.1180;MQ=47.94;MQ0=13;MQRankSum=1.033;QD=6.76;ReadPosRankSum=0.868;VQSLOD=3.3745;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:16.60:0,17,214	1/1:3,0:2:2.99:23,3,0	0/0:27,0:7:4.26:0,4,96	0/0:20,0:5:8.13:0,8,99	0/1:21,0:21:24.39:24,0,160	1/1:13,1:14:38.82:320,39,0	1/1:19,1:19:35.37:273,35,0	1/1:29,0:27:77.67:538,78,0	0/1:16,0:16:18.63:32,0,19	0/1:21,0:20:24.39:24,0,372	0/1:7,0:7:31.84:32,0,51	0/1:12,0:12:3.20:3,0,136	0/1:14,0:14:6.27:6,0,82	0/0:2,0:2:0.47:0,0,1	1/1:10,4:14:29.92:298,30,0	1/1:12,0:12:9.88:78,10,0	1/1:18,5:22:33.90:446,34,0	0/1:17,0:17:31.41:31,0,148	0/1:18,1:19:2.48:2,0,262	0/1:16,0:16:51.50:52,0,135	0/1:11,1:12:58:58,0,72	0/0:10,0:8:3:0,3,41	0/1:16,0:14:24.92:25,0,136	0/1:20,0:19:33.37:33,0,61	0/0:15,0:15:20.84:0,21,201	0/1:15,0:14:45.79:107,0,46	0/1:20,0:20:21.44:57,0,21	0/1:15,0:15:20.15:110,0,20
chr10	92598684	.	TAA	T	930.51	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.032;DP=545;FS=13.115;HRun=14;HaplotypeScore=107.4435;InbreedingCoeff=0.9355;MQ=56.87;MQ0=2;MQRankSum=-0.102;QD=13.68;ReadPosRankSum=5.546;VQSLOD=1.1008;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:29:43.77:491,44,0	1/1:0,1:1:3:28,3,0	0/0:21,0:11:14.32:0,14,190	0/0:18,0:12:14.75:0,15,173	0/0:30,0:31:76.56:0,77,876	0/0:14,0:18:37.44:0,37,342	0/0:26,0:27:65.52:0,66,738	0/0:26,0:30:49.49:0,49,549	0/0:14,0:16:38.53:0,39,432	0/0:22,0:23:51.48:0,51,568	0/0:9,0:10:29.48:0,29,359	0/0:21,0:21:53.03:0,53,664	0/0:19,0:19:51.05:0,51,649	0/0:14,0:15:44.80:0,45,565	1/1:1,8:10:17.76:151,18,0	0/0:20,0:21:41.33:0,41,523	1/1:7,18:27:36.61:411,37,0	0/0:12,0:14:38.58:0,39,474	0/0:18,0:20:47.10:0,47,570	0/0:28,0:32:78.09:0,78,846	0/0:11,0:12:26.76:0,27,327	0/0:9,0:9:23.55:0,24,284	0/0:19,0:20:56.55:0,57,590	0/0:15,0:15:38.48:0,38,426	0/0:19,0:20:30.29:0,30,364	0/0:11,0:13:27.06:0,27,333	0/0:27,0:27:73.70:0,74,920	0/0:19,0:19:48.10:0,48,589
chr10	92599816	.	A	ACCGCTCT	6662.55	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.172;DP=757;FS=4.771;HRun=0;HaplotypeScore=167.7690;InbreedingCoeff=0.9971;MQ=88.06;MQ0=1;MQRankSum=-12.205;QD=88.83;ReadPosRankSum=0.636;VQSLOD=5.6751;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.28:0,81,2101	1/1:2,10:15:36.12:1433,36,0	0/0:29,0:29:81.28:0,81,1975	0/0:28,0:28:81.28:0,81,1892	0/0:21,0:21:63.22:0,63,1616	0/0:29,0:29:84.29:0,84,2150	0/0:23,0:23:66.23:0,66,1685	0/0:37,0:37:99:0,108,2592	0/0:26,0:26:69.24:0,69,1797	0/0:39,0:39:99:0,108,2738	0/0:26,0:26:78.27:0,78,2022	0/0:35,0:35:99:0,99,2517	0/0:32,0:32:90.31:0,90,2297	0/0:22,0:22:60.21:0,60,1546	1/1:10,21:34:84.29:3302,84,0	0/0:28,0:28:81.26:0,81,2018	1/1:9,17:26:47.74:1927,48,0	0/0:20,0:19:54.15:0,54,1350	0/0:20,0:20:57.20:0,57,1470	0/0:34,0:34:93.31:0,93,2311	0/0:31,0:31:84.27:0,84,2092	0/0:20,0:20:60.21:0,60,1582	0/0:22,0:22:66.21:0,66,1588	0/0:30,0:30:90.31:0,90,2302	0/0:30,0:30:84.29:0,84,2169	0/0:33,0:33:93.32:0,93,2407	0/0:33,0:33:90.31:0,90,2353	0/0:6,0:6:18.06:0,18,475
chr10	92600587	.	C	CT	1129.40	PASS	AB=0.956;AC=36;AF=0.643;AN=56;BaseQRankSum=4.392;DP=554;FS=7.749;HRun=17;HaplotypeScore=109.8489;InbreedingCoeff=0.3613;MQ=62.60;MQ0=13;MQRankSum=-3.294;QD=2.71;ReadPosRankSum=-0.838;VQSLOD=-0.2090;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:16.54:0,17,52	0/1:9,0:9:11.50:15,0,11	0/0:24,0:9:2.60:0,3,12	0/1:23,0:13:6.91:8,0,7	0/1:18,0:21:17.04:17,0,60	1/1:18,4:21:13.11:99,13,0	1/1:19,1:20:11.74:116,12,0	1/1:21,2:24:12.19:85,12,0	0/1:11,1:12:0.40:0,0,23	1/1:24,0:24:27.89:138,28,0	1/1:17,0:17:18.95:80,19,0	1/1:14,0:14:15.53:79,16,0	1/1:18,0:18:16.20:69,16,0	1/1:14,0:14:16.15:69,16,0	0/1:22,0:21:1.79:2,0,4	1/1:9,1:15:3.99:47,4,0	0/0:34,0:34:14.56:0,15,57	1/1:23,0:21:18.77:80,19,0	0/1:22,2:22:14.49:14,0,96	0/0:18,1:20:2.06:0,2,82	0/0:9,0:8:4.72:0,5,29	1/1:17,0:17:19.26:89,19,0	1/1:21,0:20:22.28:91,22,0	1/1:15,0:14:12.76:60,13,0	1/1:20,0:20:20.49:91,20,0	0/1:25,4:30:38:38,0,57	0/0:16,1:21:10.77:0,11,47	0/1:10,1:11:9.40:17,0,9
chr10	92600590	.	T	TTC	2589.83	PASS	AB=0.595;AC=19;AF=0.339;AN=56;BaseQRankSum=4.791;DP=560;FS=23.784;HRun=0;HaplotypeScore=121.6750;InbreedingCoeff=0.8782;MQ=57.61;MQ0=17;MQRankSum=-1.618;QD=13.63;ReadPosRankSum=5.287;VQSLOD=1.8498;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:67.38:0,67,666	0/0:9,0:9:17.84:0,18,162	0/0:23,0:8:13.86:0,14,132	0/0:20,0:10:3.68:0,4,59	0/0:24,0:24:55.51:0,56,531	0/0:22,0:21:32.50:0,33,275	0/0:20,0:20:38.42:0,38,357	0/0:24,0:23:32.67:0,33,280	0/0:13,0:13:25.01:0,25,225	1/1:11,12:23:25.36:480,25,0	1/1:4,15:19:23.56:311,24,0	1/1:9,5:14:26:174,26,0	1/1:4,12:19:14.91:255,15,0	1/1:7,9:15:9.85:190,10,0	0/0:22,0:21:31.99:0,32,257	0/0:15,0:15:15.44:0,15,207	0/0:37,0:35:69.44:0,69,741	0/1:7,15:20:10.58:275,0,11	0/0:21,0:20:62.86:0,63,687	0/0:20,0:20:56.84:0,57,580	0/0:10,0:9:23.86:0,24,228	1/1:8,11:19:15.20:282,15,0	1/1:7,15:21:16.47:332,16,0	1/1:11,6:15:20.71:261,21,0	1/1:5,13:19:15.02:241,15,0	0/0:28,0:27:70.13:0,70,610	0/0:23,0:21:38.57:0,39,355	0/0:9,0:9:26.94:0,27,238
chr10	92600591	.	T	TC	998.81	PASS	AB=0.931;AC=15;AF=0.268;AN=56;BaseQRankSum=7.894;DP=556;FS=30.720;HRun=0;HaplotypeScore=110.0452;InbreedingCoeff=0.5220;MQ=57.31;MQ0=17;MQRankSum=1.288;QD=5.34;ReadPosRankSum=6.687;VQSLOD=1.3847;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:77.69:0,78,691	0/0:9,0:9:14.19:0,14,133	0/0:23,0:8:13.87:0,14,127	0/0:20,0:10:2.83:0,3,52	0/0:24,0:24:59.24:0,59,532	0/0:22,0:21:48.22:0,48,349	0/0:20,0:20:56.31:0,56,409	0/0:24,0:23:54.74:0,55,398	0/0:13,0:13:32.79:0,33,284	1/1:21,2:23:5.33:274,5,0	1/1:21,0:21:22.53:146,23,0	0/1:13,1:14:24.97:25,0,40	0/1:18,1:19:1.80:79,0,2	0/1:15,0:14:31.48:35,0,31	0/0:22,0:21:32.59:0,33,273	0/0:15,0:15:31.75:0,32,232	0/0:37,0:35:89.53:0,90,787	0/1:19,2:19:17:106,0,17	0/0:22,0:21:54.32:0,54,604	0/0:20,0:20:58.41:0,58,551	0/0:10,0:9:23.88:0,24,221	0/1:15,3:18:2.47:193,0,2	1/1:20,1:20:3.18:122,3,0	1/1:17,0:15:16.13:98,16,0	1/1:17,1:18:8.19:93,8,0	0/0:28,0:27:72.51:0,73,636	0/0:21,0:19:38.69:0,39,347	0/0:9,0:9:25.55:0,26,221
chr10	92600602	.	TTTG	T	1057.63	PASS	AB=0.986;AC=18;AF=0.321;AN=56;BaseQRankSum=-2.439;DP=519;FS=23.705;HRun=0;HaplotypeScore=101.8622;InbreedingCoeff=-0.2168;MQ=44.58;MQ0=26;MQRankSum=-4.977;QD=3.27;ReadPosRankSum=-2.476;VQSLOD=0.2216;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,3:25:0.92:203,1,0	0/0:9,0:9:3.37:0,3,47	0/0:15,0:2:3.01:0,3,59	0/1:15,0:6:8.45:8,0,58	0/0:25,0:24:56.57:0,57,701	0/1:24,0:22:58.81:59,0,206	0/0:20,0:20:34.31:0,34,267	0/1:26,0:25:99:114,0,108	0/0:9,0:9:20.86:0,21,240	0/1:25,0:24:99:128,0,112	0/1:19,0:19:50.78:86,0,51	1/1:11,2:13:22.42:230,22,0	0/1:18,0:16:9.94:10,0,115	0/1:16,0:15:24.61:48,0,25	0/1:21,0:20:4.74:5,0,25	0/0:14,0:14:7.89:0,8,141	0/1:31,0:29:46.50:47,0,96	0/1:18,2:17:55.29:55,0,90	0/0:19,0:19:51.23:0,51,844	0/0:25,0:24:68.60:0,69,850	0/0:11,0:10:23.80:0,24,247	0/1:15,0:15:31.63:32,0,38	0/1:17,1:17:35.28:35,0,116	0/1:18,0:16:32.29:74,0,32	0/1:15,1:16:84.17:84,0,99	0/0:24,0:23:64.06:0,64,911	0/0:19,0:17:31.80:0,32,379	0/0:6,0:4:12.01:0,12,172
chr10	92600603	.	TTG	T	2130.35	PASS	AB=0.994;AC=25;AF=0.446;AN=56;BaseQRankSum=1.156;DP=515;FS=16.225;HRun=0;HaplotypeScore=91.4161;InbreedingCoeff=0.2956;MQ=44.59;MQ0=26;MQRankSum=-2.566;QD=6.30;ReadPosRankSum=1.459;VQSLOD=2.0686;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,9:24:49.52:484,50,0	0/1:9,0:9:6.50:28,0,6	0/0:15,0:2:3.01:0,3,44	0/0:15,0:6:5.47:0,5,59	0/0:25,0:24:31.43:0,31,494	0/1:24,0:22:77.68:113,0,78	0/1:18,1:19:38.95:39,0,67	0/1:24,0:23:13.76:146,0,14	0/0:9,0:9:17.42:0,17,165	0/1:25,0:24:0.55:179,0,1	1/1:19,0:19:6.52:110,7,0	1/1:13,0:14:32.04:203,32,0	0/1:17,0:15:18.78:19,0,27	1/1:16,0:15:12.70:98,13,0	1/1:20,2:21:3.34:92,3,0	0/0:14,0:14:0.61:0,1,43	1/1:29,1:28:19.86:292,20,0	0/1:19,0:16:12.38:50,0,12	0/0:19,0:19:50.45:0,50,655	0/0:24,0:23:55.43:0,55,609	0/0:9,0:8:19.16:0,19,183	1/1:17,0:18:17.76:149,18,0	0/1:18,0:17:14.62:33,0,15	1/1:19,0:17:20.67:138,21,0	0/1:18,0:17:8.57:144,0,9	0/0:23,0:22:63.77:0,64,710	0/0:18,0:16:27.72:0,28,276	0/0:6,0:4:8.99:0,9,106
chr10	92600604	.	TG	T	3582.30	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=6.500;DP=486;FS=14.472;HRun=3;HaplotypeScore=77.3666;InbreedingCoeff=0.9163;MQ=45.03;MQ0=24;MQRankSum=-1.629;QD=10.89;ReadPosRankSum=2.249;VQSLOD=0.6301;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:22:55.94:346,56,0	1/1:2,7:9:13.63:86,14,0	0/0:12,0:1:3.01:0,3,31	0/0:11,0:6:4.56:0,5,38	0/0:25,0:24:29.86:0,30,350	1/1:24,0:22:34.72:194,35,0	1/1:16,1:17:18.44:122,18,0	1/1:18,1:19:40.48:239,40,0	0/0:9,0:9:6.21:0,6,104	1/1:21,1:21:57.72:350,58,0	1/1:19,0:19:34.47:194,34,0	1/1:12,2:14:33.20:188,33,0	1/1:16,0:15:23.31:112,23,0	1/1:15,0:14:25.73:142,26,0	1/1:5,17:21:17.91:167,18,0	1/1:12,0:12:13.73:75,14,0	1/1:23,7:28:63.93:473,64,0	1/1:18,0:15:24.87:115,25,0	0/0:19,0:19:45.32:0,45,446	0/0:23,0:22:58.59:0,59,466	0/0:9,0:8:17.89:0,18,144	1/1:17,0:17:35.37:209,35,0	1/1:17,0:16:27.64:126,28,0	1/1:16,0:15:36.58:204,37,0	1/1:15,0:14:38.54:238,39,0	0/0:23,0:22:58.07:0,58,477	0/0:17,0:15:18.02:0,18,160	0/0:5,0:3:9:0,9,82
chr10	92602235	.	GA	G	3060.87	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.528;DP=743;FS=10.633;HRun=1;HaplotypeScore=76.8904;InbreedingCoeff=0.9985;MQ=75.02;MQ0=0;MQRankSum=-1.373;QD=35.59;ReadPosRankSum=2.915;VQSLOD=3.4371;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,99,1577	1/1:0,8:8:21.07:293,21,0	0/0:26,0:25:72.21:0,72,1083	0/0:29,0:29:66.32:0,66,1207	0/0:31,0:31:87.30:0,87,1375	0/0:23,0:23:66.23:0,66,1052	0/0:25,0:25:75.23:0,75,1153	0/0:22,0:21:63.21:0,63,1004	0/0:24,0:24:72.25:0,72,1142	0/0:27,0:27:75.26:0,75,1192	0/0:18,0:18:36.10:0,36,546	0/0:38,0:38:99:0,114,1793	0/0:31,0:31:90.31:0,90,1438	0/0:33,0:33:96.33:0,96,1529	1/1:0,41:41:99:1677,120,0	0/0:30,0:30:87.30:0,87,1387	1/1:0,37:37:90.22:1233,90,0	0/0:17,0:17:51.17:0,51,812	0/0:17,0:17:48.16:0,48,763	0/0:24,0:24:66.22:0,66,1042	0/0:41,0:41:99:0,108,1674	0/0:25,0:25:69.24:0,69,1100	0/0:23,0:23:54.16:0,54,836	0/0:28,0:28:84.27:0,84,1311	0/0:21,0:21:51.07:0,51,734	0/0:22,0:22:63.21:0,63,1007	0/0:26,0:26:78.27:0,78,1240	0/0:15,0:15:45.15:0,45,719
chr10	92602445	.	C	CAAAACA	3732.94	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.937;DP=633;FS=7.792;HRun=0;HaplotypeScore=171.1409;InbreedingCoeff=0.8808;MQ=61.18;MQ0=0;MQRankSum=-7.253;QD=47.86;ReadPosRankSum=-1.893;VQSLOD=2.8875;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:34.66:0,35,649	1/1:3,6:9:21.07:697,21,0	0/0:23,0:19:17.68:0,18,401	0/1:13,0:11:3.03:3,0,180	0/0:16,0:16:36.12:0,36,739	0/0:22,0:22:44.51:0,45,873	0/0:20,0:20:39.12:0,39,758	0/0:34,0:34:84.26:0,84,1639	0/0:24,0:24:54.17:0,54,1066	0/0:28,0:28:66.18:0,66,1293	0/0:22,0:22:42.14:0,42,894	0/0:26,0:26:51.17:0,51,1024	0/0:25,0:25:57.17:0,57,1181	0/0:23,0:23:42.14:0,42,807	1/1:17,9:25:69.24:1997,69,0	0/0:16,0:16:30.10:0,30,607	1/1:25,5:30:29.06:1036,29,0	0/0:31,0:31:69.24:0,69,1407	0/0:16,0:16:33.11:0,33,676	0/0:36,0:36:99:0,99,2064	0/0:13,0:13:30.10:0,30,586	0/0:23,0:23:51.17:0,51,1060	0/0:23,0:23:42.08:0,42,815	0/0:19,0:19:30.10:0,30,598	0/0:17,0:17:24.08:0,24,510	0/0:29,0:29:81.28:0,81,1684	0/0:30,0:30:72.24:0,72,1467	0/0:19,0:19:51.17:0,51,1012
chr10	92602494	.	TGA	T	655.14	PASS	AB=0.918;AC=4;AF=0.071;AN=56;BaseQRankSum=3.415;DP=554;FS=3.648;HRun=0;HaplotypeScore=194.8664;InbreedingCoeff=-0.0733;MQ=68.73;MQ0=0;MQRankSum=-5.302;QD=7.62;ReadPosRankSum=-3.405;VQSLOD=3.0283;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:6.41:6,0,347	0/0:10,0:10:10.50:0,11,272	0/0:21,0:21:54.13:0,54,935	0/0:19,0:18:54.04:0,54,888	0/0:34,0:34:99:0,99,1822	0/0:16,0:16:30.02:0,30,306	0/1:13,0:13:19.39:19,0,127	0/1:21,20:41:99:720,0,600	0/0:15,0:15:45.15:0,45,842	0/0:16,0:16:27.26:0,27,410	0/0:18,0:18:36.58:0,37,351	0/0:12,0:12:26.99:0,27,270	0/0:19,0:19:40.74:0,41,381	0/0:18,0:18:29.95:0,30,254	0/1:13,0:13:9.57:10,0,147	0/0:13,0:13:35.97:0,36,349	0/0:19,0:19:24.14:0,24,361	0/0:14,0:14:36.02:0,36,386	0/0:24,0:24:69.24:0,69,1285	0/0:35,0:35:99:0,105,1880	0/0:13,0:13:36.12:0,36,666	0/0:23,0:23:46.50:0,46,474	0/0:21,0:21:42.23:0,42,353	0/0:13,0:13:15.51:0,16,171	0/0:19,0:19:38.97:0,39,352	0/0:34,0:34:99:0,102,1864	0/0:25,0:25:72.25:0,72,1332	0/0:17,0:17:51.15:0,51,921
chr10	92602496	.	A	AGAACACCAAACTAAACACT	65253.98	PASS	AB=0.757;AC=36;AF=0.643;AN=56;BaseQRankSum=-2.969;DP=671;FS=3.302;HRun=0;HaplotypeScore=252.7404;InbreedingCoeff=0.8438;MQ=65.73;MQ0=0;MQRankSum=-18.552;QD=138.84;ReadPosRankSum=2.313;VQSLOD=4.5886;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,9:24:48.12:3720,48,0	1/1:7,3:15:30.06:2282,30,0	0/0:19,0:19:54.18:0,54,2192	0/0:19,0:19:36.24:0,36,1808	0/0:35,0:35:99:0,99,4647	1/1:9,5:29:42.14:3263,42,0	1/1:7,5:20:36.12:2505,36,0	1/1:44,0:44:99:7043,120,0	0/0:15,0:15:45.14:0,45,2190	1/1:6,9:23:57.16:3732,57,0	1/1:6,11:25:48.16:4012,48,0	1/1:6,5:24:24.08:2141,24,0	1/1:9,8:23:51.18:3707,51,0	1/1:5,9:21:39.13:3365,39,0	1/1:4,8:24:36.12:3207,36,0	0/1:3,9:19:99:3002,0,127	1/1:16,4:24:60.21:4744,60,0	1/1:8,5:21:35.38:2927,35,0	0/0:25,0:25:69.24:0,69,3308	0/0:35,0:35:96.31:0,96,4232	0/0:12,0:12:36.12:0,36,1529	1/1:9,12:28:63.22:4896,63,0	1/1:11,10:33:57.12:4817,57,0	1/1:8,2:15:27.09:1625,27,0	1/1:5,11:24:48.16:4093,48,0	0/1:33,1:34:99:174,0,4783	0/0:24,0:24:69.24:0,69,3303	0/0:17,0:17:48.16:0,48,2535
chr10	92603122	.	T	TG	10928.07	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-11.446;DP=436;FS=3.620;HRun=2;HaplotypeScore=39.6740;InbreedingCoeff=0.9505;MQ=74.32;MQ0=0;MQRankSum=-0.449;QD=37.04;ReadPosRankSum=2.410;VQSLOD=5.0864;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:75.18:1047,75,0	1/1:0,6:6:15.05:215,15,0	0/0:7,0:7:18.06:0,18,223	0/0:7,0:7:14.40:0,14,146	0/0:7,0:7:21.05:0,21,247	1/1:0,5:5:15.05:216,15,0	1/1:3,33:36:96.32:1383,96,0	1/1:2,15:17:45.07:564,45,0	0/0:17,0:17:51.16:0,51,626	1/1:1,11:12:33.10:454,33,0	1/1:0,4:4:9.03:130,9,0	1/1:0,24:24:57.19:821,57,0	1/1:1,10:11:27.06:359,27,0	1/1:0,20:20:60.20:864,60,0	1/1:0,8:8:18.06:259,18,0	1/1:0,10:10:30.10:432,30,0	1/1:4,30:34:81.27:1166,81,0	1/1:1,26:27:72.24:1036,72,0	0/0:11,0:11:33.10:0,33,409	0/0:5,0:5:15.03:0,15,172	0/0:56,0:56:99:0,159,1942	1/1:0,9:9:21.07:302,21,0	1/1:0,1:1:3.01:43,3,0	1/1:2,32:34:87.29:1249,87,0	1/1:0,11:11:27.09:389,27,0	0/0:16,0:16:48.14:0,48,584	0/0:9,0:8:24.07:0,24,298	0/0:6,0:6:18.06:0,18,219
chr10	92605577	.	A	AC	14279.60	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-13.677;DP=578;FS=3.161;HRun=1;HaplotypeScore=58.0302;InbreedingCoeff=0.9994;MQ=79.39;MQ0=0;MQRankSum=-2.643;QD=40.68;ReadPosRankSum=0.671;VQSLOD=5.4209;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:48.14:689,48,0	1/1:0,8:8:24.08:359,24,0	0/0:23,0:23:66.20:0,66,824	0/0:12,0:12:26.86:0,27,330	0/0:21,0:21:63.20:0,63,818	1/1:1,11:12:33.11:494,33,0	1/1:0,16:16:48.16:719,48,0	1/1:2,26:28:75.24:1103,75,0	0/0:15,0:15:42.14:0,42,545	1/1:1,22:23:66.21:968,66,0	1/1:1,27:28:68.21:1114,68,0	1/1:3,13:16:42.13:609,42,0	1/1:1,15:16:48.15:700,48,0	1/1:1,21:22:63.21:944,63,0	1/1:2,14:16:45.14:647,45,0	1/1:4,21:25:33.29:974,33,0	1/1:4,16:20:51.16:736,51,0	1/1:1,22:23:60.20:898,60,0	0/0:16,0:16:45.14:0,45,574	0/0:22,0:22:66.20:0,66,843	0/0:19,0:19:54.16:0,54,687	1/1:1,16:17:48.16:719,48,0	1/1:0,21:21:57.19:854,57,0	1/1:0,17:17:48.16:719,48,0	1/1:1,24:25:69.23:1034,69,0	0/0:35,0:35:99:0,105,1350	0/0:40,0:40:99:0,117,1504	0/0:24,0:24:69.22:0,69,895
chr10	92605616	.	AT	A	511.82	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.316;DP=559;FS=7.997;HRun=11;HaplotypeScore=105.8748;InbreedingCoeff=0.9111;MQ=70.54;MQ0=2;MQRankSum=-8.451;QD=13.12;ReadPosRankSum=-0.336;VQSLOD=2.9336;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:22:33.62:0,34,227	1/1:1,2:3:5.99:49,6,0	0/0:14,0:14:20.88:0,21,185	0/0:11,0:11:9.62:0,10,133	0/0:30,0:30:81.20:0,81,864	0/0:13,0:13:30.08:0,30,320	0/0:7,0:7:13.85:0,14,133	0/0:42,0:42:99:0,102,1061	0/0:14,0:14:33.07:0,33,345	0/0:22,0:21:48.11:0,48,506	0/0:28,0:27:63.14:0,63,659	0/0:19,0:19:41.79:0,42,422	0/0:20,1:21:35.46:0,35,569	0/0:22,1:23:35.52:0,36,571	1/1:2,13:15:26.08:304,26,0	0/0:18,0:18:36.09:0,36,384	1/1:6,15:21:37.86:293,38,0	0/0:20,0:20:54.03:0,54,541	0/0:21,0:21:45.11:0,45,474	0/0:26,0:27:71.94:0,72,730	0/0:11,1:12:8.44:0,8,295	0/0:15,0:14:33.08:0,33,346	0/0:16,0:16:36.55:0,37,378	0/0:12,0:12:33.08:0,33,352	0/0:22,1:23:26.48:0,26,471	0/0:31,0:32:87:0,87,878	0/0:33,0:33:84.20:0,84,889	0/0:24,1:25:35.48:0,35,572
chr10	92605661	.	CT	C	426.91	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=8.094;DP=569;FS=8.947;HRun=10;HaplotypeScore=120.0780;InbreedingCoeff=0.7968;MQ=65.17;MQ0=2;MQRankSum=-1.634;QD=4.31;ReadPosRankSum=-2.886;VQSLOD=0.2923;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:46.61:0,47,284	0/0:6,0:6:1.61:0,2,32	0/0:12,1:13:13:0,13,187	0/1:12,0:12:3.54:4,0,141	0/0:39,0:39:61.65:0,62,1044	1/1:11,0:11:23.05:91,23,0	1/1:9,0:9:19.08:75,19,0	1/1:41,0:41:47.53:217,48,0	0/0:13,0:13:39.11:0,39,431	0/0:26,0:25:58.37:0,58,373	0/0:21,0:21:53.98:0,54,332	0/0:25,0:25:52.26:0,52,310	0/0:26,0:26:66.84:0,67,382	0/0:20,0:20:44.42:0,44,246	0/0:21,0:21:56.21:0,56,293	1/1:26,0:26:33.41:200,33,0	0/0:21,0:21:42.61:0,43,211	0/0:22,0:22:58.14:0,58,333	0/0:13,0:13:30.06:0,30,321	0/0:41,1:42:88.22:0,88,1177	0/0:10,1:11:1:0,1,229	0/0:15,0:14:37.71:0,38,211	0/0:15,0:15:32.34:0,32,178	0/0:13,0:13:34.83:0,35,195	0/0:22,0:22:57.25:0,57,322	0/0:25,1:26:42.92:0,43,644	0/0:20,1:21:28.06:0,28,520	0/0:16,0:16:48.13:0,48,531
chr10	92605670	.	T	TAA	3719.88	PASS	AB=0.991;AC=19;AF=0.339;AN=56;BaseQRankSum=4.474;DP=576;FS=2.374;HRun=0;HaplotypeScore=121.2674;InbreedingCoeff=0.5725;MQ=64.00;MQ0=2;MQRankSum=-3.880;QD=15.18;ReadPosRankSum=-2.304;VQSLOD=3.4301;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:24:67.30:67,0,95	0/0:8,0:8:11.69:0,12,84	0/0:15,0:13:32.57:0,33,394	0/0:12,0:12:25.60:0,26,318	0/0:41,0:41:99:0,100,1767	1/1:0,12:12:30.06:461,30,0	1/1:0,10:10:24.08:395,24,0	1/1:6,32:38:85.07:1436,85,0	0/0:14,0:14:42.14:0,42,680	0/0:24,0:23:10.26:0,10,134	0/1:21,0:22:16.65:17,0,75	0/0:24,0:24:9.58:0,10,72	0/0:25,0:25:7.01:0,7,37	1/1:18,0:18:6.92:44,7,0	0/0:22,0:22:52.46:0,52,428	1/1:3,25:28:42.24:1135,42,0	0/0:19,0:19:40.73:0,41,289	0/1:22,0:23:10.72:11,0,16	0/0:12,0:12:36.10:0,36,552	0/0:41,0:41:99:0,123,1897	0/0:14,0:14:42.09:0,42,608	0/1:17,0:16:5.49:10,0,5	1/1:15,0:15:9.26:37,9,0	1/1:13,0:13:10.43:43,10,0	0/1:25,0:25:36.95:64,0,37	0/0:26,0:26:68.71:0,69,1022	0/0:18,0:18:54.14:0,54,814	0/0:16,0:16:48.16:0,48,779
chr10	92605671	.	T	TAA	14209.17	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-2.227;DP=578;FS=3.940;HRun=3;HaplotypeScore=84.0571;InbreedingCoeff=0.9955;MQ=64.12;MQ0=2;MQRankSum=-3.887;QD=38.40;ReadPosRankSum=0.779;VQSLOD=4.4605;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,18:24:18.18:688,18,0	1/1:0,0:8:15.20:87,15,0	0/0:15,0:13:30.07:0,30,364	0/0:11,0:12:28.58:0,29,320	0/0:40,0:40:99:0,111,1523	1/1:12,0:12:30.07:480,30,0	1/1:11,0:11:27.09:447,27,0	1/1:38,0:38:99:1535,102,0	0/0:16,0:16:42.14:0,42,584	1/1:2,23:25:63.20:1058,63,0	1/1:6,16:22:60.19:986,60,0	1/1:2,22:24:48.16:842,48,0	1/1:1,24:26:65.92:1157,66,0	1/1:3,16:19:54.18:938,54,0	1/1:8,0:20:42.98:220,43,0	1/1:26,0:28:72.25:1203,72,0	1/1:0,0:20:41.68:206,42,0	1/1:4,18:22:60.21:1042,60,0	0/0:13,0:13:33.11:0,33,460	0/0:41,0:41:99:0,111,1530	0/0:13,0:13:39.11:0,39,521	1/1:0,17:16:48.12:778,48,0	1/1:3,11:14:39.13:679,39,0	1/1:0,14:14:36.12:631,36,0	1/1:6,18:25:72.25:1234,72,0	0/0:24,0:24:21.34:0,21,781	0/0:17,0:17:48.14:0,48,653	0/0:17,0:17:45.12:0,45,594
chr10	92606291	.	C	CGCGTGCGT	2510.65	PASS	AB=0.940;AC=35;AF=0.833;AN=42;BaseQRankSum=-1.025;DP=334;FS=0.000;HRun=0;HaplotypeScore=113.9776;InbreedingCoeff=0.3248;MQ=59.68;MQ0=2;MQRankSum=1.591;QD=10.00;ReadPosRankSum=1.662;VQSLOD=1.8373;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:0.29:1,0,0	./.	./.	./.	0/1:4,3:7:0:0,0,0	0/1:9,0:9:0:0,0,0	1/1:25,0:25:17.81:184,18,0	1/1:6,0:4:5.96:45,6,0	1/1:10,0:10:9.03:190,9,0	1/1:7,0:7:6.02:84,6,0	./.	./.	1/1:12,0:12:2.94:18,3,0	0/1:12,0:11:0:0,0,0	0/1:10,0:10:0:0,0,0	1/1:7,0:7:3.01:51,3,0	1/1:35,0:35:31.95:465,32,0	1/1:12,0:12:3.01:63,3,0	1/1:7,3:13:21.89:421,22,0	1/1:3,0:3:3.01:49,3,0	./.	./.	0/0:2,0:2:0.47:0,0,1	1/1:13,0:13:3.01:70,3,0	0/1:6,0:6:0:0,0,0	1/1:7,6:17:18.01:458,18,0	1/1:5,7:16:9.03:362,9,0	1/1:2,1:3:3.01:123,3,0
chr10	92606313	.	C	CGCGTGTGTGTGTGTGTGTGTGTGT	4056.20	PASS	AB=0.990;AC=16;AF=0.308;AN=52;BaseQRankSum=4.992;DP=341;FS=40.329;HRun=0;HaplotypeScore=175.6737;InbreedingCoeff=0.4322;MQ=44.71;MQ0=8;MQRankSum=-7.633;QD=25.51;ReadPosRankSum=1.318;VQSLOD=1.2863;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:6.54:0,7,49	./.	0/0:6,0:2:2.99:0,3,23	0/0:8,0:1:3.01:0,3,44	0/0:9,0:9:12.04:0,12,279	0/1:10,0:10:0:0,0,0	0/1:22,0:23:99:157,0,292	0/1:13,0:9:50.39:324,0,50	0/0:8,0:8:14.91:0,15,345	1/1:9,0:9:24.06:898,24,0	0/0:2,0:2:0:0,0,0	1/1:14,0:14:12.44:398,12,0	1/1:9,0:9:15.05:630,15,0	1/1:13,0:11:8.97:167,9,0	0/0:9,0:9:2.93:0,3,25	./.	0/1:36,0:36:99:900,0,266	1/1:0,0:16:3.01:313,3,0	0/0:19,0:15:37.11:0,37,872	0/0:4,0:4:12.04:0,12,265	0/0:31,0:31:36.09:0,36,816	0/0:1,0:1:0:0,0,0	0/0:2,0:2:0:0,0,0	1/1:2,0:16:2.34:269,2,0	0/0:1,1:8:2.97:0,3,20	0/0:12,0:12:27.50:0,27,518	0/0:15,0:15:18.06:0,18,306	0/0:7,0:7:18.06:0,18,564
chr10	92606319	.	TGC	T	146.69	PASS	AB=0.958;AC=18;AF=0.360;AN=50;BaseQRankSum=3.052;DP=309;FS=0.000;HRun=0;HaplotypeScore=91.3710;InbreedingCoeff=0.4231;MQ=45.77;MQ0=8;MQRankSum=-2.297;QD=0.94;ReadPosRankSum=-0.923;VQSLOD=1.4948;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:3.46:26,3,0	./.	0/0:6,0:2:4.74:0,5,23	0/0:8,0:1:2.37:0,2,8	0/0:8,0:8:6.02:0,6,89	0/1:10,0:10:0:0,0,0	1/1:17,5:22:6.90:73,7,0	1/1:12,1:9:6.02:72,6,0	0/0:8,0:8:10.22:0,10,158	0/0:8,0:8:4.74:0,5,29	0/1:2,0:2:0:0,0,0	1/1:14,0:14:1.22:4,1,0	0/0:9,0:9:2.92:0,3,17	1/1:14,0:12:5.98:47,6,0	0/1:8,0:8:0.04:0,0,0	./.	1/1:30,0:30:1.97:8,2,0	0/1:9,0:9:3.27:14,0,3	0/0:21,0:17:36.08:0,36,512	0/1:2,1:3:32.09:32,0,39	0/0:24,0:24:24.08:0,24,361	0/1:1,0:1:0:0,0,0	0/0:2,0:2:0:0,0,0	0/0:14,0:14:1.67:0,2,8	./.	0/0:11,0:11:18.26:0,18,223	0/0:11,0:11:11.77:0,12,108	0/0:8,0:8:20.60:0,21,258
chr10	92606321	.	C	CGT	670.30	PASS	AB=0.917;AC=24;AF=0.500;AN=48;BaseQRankSum=5.799;DP=282;FS=0.000;HRun=0;HaplotypeScore=85.3522;InbreedingCoeff=0.2592;MQ=48.90;MQ0=8;MQRankSum=-4.591;QD=3.37;ReadPosRankSum=-0.456;VQSLOD=1.6112;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:3.36:25,3,0	./.	0/0:6,0:2:4.74:0,5,23	0/0:9,0:2:2.37:0,2,8	0/0:6,0:6:6.02:0,6,89	0/1:0,10:10:0:0,0,0	1/1:16,4:20:17.93:208,18,0	1/1:13,0:9:11.79:99,12,0	0/1:8,0:8:49.85:50,0,117	0/0:5,0:5:0.76:0,1,3	./.	1/1:9,0:9:1.55:4,2,0	0/0:4,0:4:0.89:0,1,2	1/1:6,0:5:5.98:47,6,0	0/1:8,0:8:0:0,0,0	./.	1/1:29,0:29:9.28:91,9,0	1/1:10,0:10:5.97:47,6,0	0/1:21,0:17:24.67:25,0,426	0/1:3,0:3:35.64:54,0,36	0/0:25,0:25:27.07:0,27,379	0/0:1,0:1:0:0,0,0	0/0:2,0:2:0:0,0,0	1/1:14,0:14:3.47:28,3,0	./.	0/1:9,0:9:64.71:65,0,89	1/1:10,0:10:11.25:62,11,0	0/0:8,0:8:3.57:0,4,190
chr10	92607558	.	GCTTT	G	3645.72	PASS	AB=0.547;AC=4;AF=0.071;AN=56;BaseQRankSum=10.978;DP=890;FS=2.168;HRun=0;HaplotypeScore=148.3965;InbreedingCoeff=0.4614;MQ=58.90;MQ0=2;MQRankSum=-2.450;QD=37.98;ReadPosRankSum=2.074;VQSLOD=4.1982;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.24:0,96,2297	0/0:12,0:12:29.79:0,30,822	0/0:42,0:37:99:0,102,2574	0/0:26,0:22:63.22:0,63,1699	0/0:28,0:28:75.25:0,75,1919	0/1:8,33:41:79.53:1402,0,80	1/1:1,20:21:48.16:927,48,0	0/0:66,0:61:99:0,138,3721	0/0:25,0:25:69.24:0,69,1853	0/0:41,0:41:96.76:0,97,2493	0/0:18,0:18:45.15:0,45,1232	0/0:29,0:29:78.27:0,78,2129	0/0:31,0:31:78.25:0,78,2053	0/0:39,0:38:99:0,108,2848	0/0:36,0:36:96.32:0,96,2564	0/1:5,29:34:85.92:1316,0,86	0/0:25,0:25:60.15:0,60,1521	0/0:24,0:24:63.22:0,63,1638	0/0:37,0:35:74.93:0,75,1936	0/0:48,0:48:99:0,123,3223	0/0:31,0:31:81.28:0,81,2169	0/0:26,0:26:60.21:0,60,1585	0/0:21,0:21:54.19:0,54,1475	0/0:21,0:21:60.21:0,60,1642	0/0:26,0:26:75.26:0,75,2053	0/0:43,0:43:99:0,114,2958	0/0:50,0:49:99:0,135,3460	0/0:14,0:14:42.14:0,42,1146
chr10	92607948	.	C	CTG	362.29	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.101;DP=599;FS=7.751;HRun=0;HaplotypeScore=124.4493;InbreedingCoeff=0.6401;MQ=44.05;MQ0=33;MQRankSum=-1.593;QD=19.07;ReadPosRankSum=-4.141;VQSLOD=2.5944;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:54.08:0,54,774	0/0:10,0:10:21.03:0,21,257	0/0:6,0:1:3.01:0,3,46	0/0:16,0:2:5.33:0,5,27	0/0:20,0:20:36.11:0,36,529	0/0:17,0:16:24.95:0,25,348	0/0:21,0:14:17.87:0,18,232	1/1:7,12:12:36.04:457,36,0	0/0:20,0:20:44.86:0,45,581	0/0:31,0:28:75.37:0,75,1019	0/0:12,0:11:12.01:0,12,139	0/0:18,0:17:24.07:0,24,344	0/0:17,0:16:20.55:0,21,306	0/0:32,0:29:39.13:0,39,593	0/0:35,0:35:66.17:0,66,925	0/0:20,0:19:22.42:0,22,357	0/0:30,0:27:47.33:0,47,541	0/0:32,0:28:53.96:0,54,642	0/0:27,0:26:78.17:0,78,1110	0/0:18,0:17:20.82:0,21,320	0/0:33,0:30:66.17:0,66,923	0/0:18,0:16:18.03:0,18,234	0/0:13,0:13:21.07:0,21,318	0/0:30,0:27:28.19:0,28,411	0/0:8,0:7:3.01:0,3,46	0/0:27,0:26:72.23:0,72,1066	0/0:26,0:24:54.64:0,55,707	0/0:14,0:10:26.30:0,26,366
chr10	92607978	.	CTCTG	C	880.22	PASS	AB=0.977;AC=12;AF=0.231;AN=52;BaseQRankSum=6.255;DP=556;FS=10.472;HRun=0;HaplotypeScore=152.2886;InbreedingCoeff=-0.1411;MQ=41.76;MQ0=32;MQRankSum=-1.878;QD=3.76;ReadPosRankSum=-1.265;VQSLOD=2.0314;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:36.14:0,36,765	0/0:6,0:6:8.67:0,9,47	./.	./.	0/0:15,0:15:8.94:0,9,86	0/0:21,0:19:4.38:0,4,71	0/0:22,0:14:2.55:0,3,16	0/0:13,0:6:11.27:0,11,104	0/0:15,0:15:4.95:0,5,203	0/1:29,0:27:99:171,0,236	0/1:8,1:8:0:0,0,0	0/1:14,1:14:7.89:133,0,8	0/1:20,0:19:40.73:192,0,41	0/1:27,2:26:65.48:65,0,262	0/0:26,0:26:18.48:0,18,227	0/0:16,0:15:13.99:0,14,116	0/0:39,0:36:50.62:0,51,762	0/1:36,0:32:99:246,0,487	0/0:23,0:21:41.61:0,42,460	0/0:24,0:22:24.30:0,24,233	0/0:32,0:27:40.83:0,41,360	1/1:15,0:14:0.47:1,0,0	0/1:14,0:13:34.21:45,0,34	0/1:28,0:25:99:130,0,135	0/0:9,0:8:2.97:0,3,59	0/0:29,0:27:51.41:0,51,428	0/1:22,0:20:7.17:7,0,343	0/1:17,0:13:18.82:19,0,170
chr10	92607982	.	G	GTC	1952.59	PASS	AB=0.832;AC=23;AF=0.460;AN=50;BaseQRankSum=-1.219;DP=569;FS=5.963;HRun=0;HaplotypeScore=146.0406;InbreedingCoeff=0.2552;MQ=42.15;MQ0=31;MQRankSum=-0.423;QD=6.30;ReadPosRankSum=-1.423;VQSLOD=2.7859;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:24.10:0,24,427	./.	./.	./.	0/0:13,0:13:5.75:0,6,53	1/1:23,0:21:4.55:29,5,0	1/1:23,0:15:0.47:2,0,0	0/1:14,0:7:10.39:10,0,64	0/1:14,0:14:29.19:29,0,130	1/1:7,18:24:3:562,3,0	1/1:11,1:11:3.01:32,3,0	1/1:8,9:17:14.79:223,15,0	1/1:6,16:22:21.11:287,21,0	1/1:21,5:23:17.78:233,18,0	0/0:28,0:28:15.02:0,15,157	0/1:17,0:16:14.73:15,0,15	0/0:40,0:37:4.61:0,5,477	0/1:17,17:32:99:382,0,248	0/0:22,0:21:25.84:0,26,228	0/0:26,0:24:13.66:0,14,174	0/0:30,0:25:21.04:0,21,245	0/1:5,13:18:0.30:0,0,1	1/1:5,10:14:3.01:53,3,0	0/1:9,18:25:19.31:244,0,19	0/0:3,7:9:2.94:0,3,18	0/0:30,0:28:6.69:0,7,215	0/0:21,0:19:2.43:0,2,234	0/1:17,0:13:9.26:9,0,75
chr10	92608016	.	CTCTCTG	C	2516.82	PASS	AB=0.992;AC=33;AF=0.589;AN=56;BaseQRankSum=-1.030;DP=575;FS=3.017;HRun=0;HaplotypeScore=180.0815;InbreedingCoeff=-0.0992;MQ=59.87;MQ0=22;MQRankSum=0.147;QD=5.52;ReadPosRankSum=-1.832;VQSLOD=2.6394;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:38.54:0,39,589	1/1:6,0:6:2.89:25,3,0	0/0:29,0:22:51.63:0,52,632	0/0:28,0:19:42.92:0,43,517	0/0:20,0:20:2.03:0,2,5	1/1:22,0:20:3.10:108,3,0	1/1:16,0:13:11.95:95,12,0	0/1:23,0:20:81.57:198,0,82	1/1:14,0:14:2.02:126,2,0	0/1:18,0:17:6.97:136,0,7	1/1:14,0:14:5.29:42,5,0	0/1:17,0:16:36.89:37,0,63	0/0:15,0:15:13.89:0,14,99	0/1:21,0:20:38.79:39,0,75	1/1:24,0:24:16.98:211,17,0	0/1:20,0:19:32.49:59,0,32	0/1:36,1:35:37.01:166,0,37	0/1:29,0:24:63.31:63,0,122	0/1:20,0:20:43.31:304,0,43	1/1:25,0:23:13.45:172,13,0	1/1:26,0:23:2.43:83,2,0	1/1:18,0:17:9.93:48,10,0	0/1:9,0:9:13.48:95,0,13	0/1:30,0:27:21.26:21,0,105	0/1:15,0:14:29.30:29,0,57	0/1:22,0:20:15.02:186,0,15	0/1:20,2:21:85.96:281,0,86	1/1:7,1:5:9.03:163,9,0
chr10	92608018	.	CTCTG	C	3022.18	PASS	AB=0.983;AC=32;AF=0.571;AN=56;BaseQRankSum=0.270;DP=562;FS=2.145;HRun=0;HaplotypeScore=167.5250;InbreedingCoeff=-0.1967;MQ=61.39;MQ0=19;MQRankSum=-3.015;QD=6.57;ReadPosRankSum=-2.612;VQSLOD=2.6770;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:33.39:0,33,352	1/1:5,1:6:8.95:75,9,0	0/0:29,0:22:51.42:0,51,623	0/0:29,0:20:45.14:0,45,500	0/0:19,0:19:1.13:0,1,4	1/1:20,0:19:13.12:142,13,0	1/1:16,0:13:11.95:95,12,0	1/1:21,0:20:29.23:346,29,0	0/1:14,1:15:52.28:112,0,52	0/1:16,0:16:25.12:100,0,25	0/1:14,0:14:5.88:34,0,6	0/1:17,0:16:24.27:70,0,24	0/1:16,0:16:23.56:24,0,50	0/1:21,0:20:44.44:49,0,44	0/1:20,3:23:27.78:106,0,28	0/1:21,0:20:19.19:135,0,19	0/1:34,2:34:87.03:145,0,87	0/1:30,0:25:58.84:100,0,59	0/1:18,0:18:27.33:378,0,27	1/1:24,0:22:16.11:208,16,0	1/1:23,2:22:3.40:153,3,0	0/1:16,0:15:9.93:10,0,23	0/1:9,0:9:1.15:105,0,1	0/1:29,0:26:29.39:29,0,70	0/1:15,0:14:17.89:18,0,32	1/1:25,0:23:11.29:382,11,0	0/1:19,1:20:63.22:240,0,63	1/1:7,0:5:9.03:136,9,0
chr10	92608020	.	CTG	C	4421.36	PASS	AB=0.975;AC=38;AF=0.679;AN=56;BaseQRankSum=-2.209;DP=557;FS=3.586;HRun=0;HaplotypeScore=154.1526;InbreedingCoeff=-0.0010;MQ=66.22;MQ0=16;MQRankSum=-3.543;QD=9.47;ReadPosRankSum=-2.432;VQSLOD=4.0012;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:28.99:0,29,366	1/1:5,0:5:11.99:100,12,0	0/0:32,0:25:65.41:0,65,677	0/0:31,0:22:43.83:0,44,488	1/1:1,16:17:3.01:41,3,0	1/1:20,0:19:20.96:172,21,0	1/1:15,0:13:12.84:97,13,0	1/1:20,0:19:35.99:322,36,0	0/1:13,2:15:39.99:180,0,40	0/1:15,0:15:17.90:131,0,18	0/1:13,0:13:2.26:34,0,2	0/1:15,1:15:18.85:117,0,19	0/1:16,0:16:23.78:33,0,24	0/1:21,0:20:9.02:69,0,9	0/1:22,1:23:22.82:93,0,23	1/1:21,0:20:14.58:220,15,0	0/1:33,3:34:75.77:232,0,76	0/1:30,0:25:54.85:76,0,55	1/1:17,1:18:27.69:365,28,0	1/1:17,5:20:38.75:390,39,0	1/1:7,16:20:21.05:255,21,0	0/1:16,0:15:10.04:53,0,10	0/1:11,0:11:16.21:147,0,16	0/1:28,0:26:22.38:48,0,22	1/1:15,0:14:2.14:79,2,0	1/1:22,4:24:62.92:595,63,0	1/1:16,4:20:23.38:465,23,0	1/1:2,3:5:9.03:108,9,0
chr10	92608066	.	A	ATG	3097.81	PASS	AB=0.633;AC=47;AF=0.870;AN=54;BaseQRankSum=1.348;DP=629;FS=5.559;HRun=0;HaplotypeScore=209.1050;InbreedingCoeff=0.0530;MQ=68.79;MQ0=8;MQRankSum=-0.475;QD=5.77;ReadPosRankSum=-3.016;VQSLOD=2.6037;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:25:7.04:37,7,0	0/1:5,9:14:0.02:337,0,0	./.	0/0:44,0:36:0.34:0,0,29	1/1:24,0:24:6.84:86,7,0	1/1:22,0:19:9:86,9,0	1/1:14,0:12:3:26,3,0	1/1:27,0:26:2.96:19,3,0	1/1:24,0:23:8.93:87,9,0	1/1:24,0:24:13.67:179,14,0	1/1:12,0:22:3:26,3,0	1/1:19,0:19:6.71:52,7,0	1/1:12,0:12:3:26,3,0	1/1:16,0:17:12.02:132,12,0	0/1:11,16:28:28.17:447,0,28	1/1:21,0:21:5.98:47,6,0	0/1:13,15:30:22.34:417,0,22	1/1:17,0:17:2.43:43,2,0	1/1:16,0:16:14.07:97,14,0	1/1:23,0:24:7.26:76,7,0	1/1:27,0:27:9.01:97,9,0	1/1:16,0:16:5.74:37,6,0	0/0:10,0:10:0.47:0,0,1	1/1:28,0:27:7.57:89,8,0	1/1:13,0:15:5.68:37,6,0	1/1:31,0:28:46.09:407,46,0	1/1:28,0:28:27.28:205,27,0	1/1:8,0:8:16.68:112,17,0
chr10	92609738	.	CT	C	2721.66	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=2.776;DP=372;FS=50.943;HRun=8;HaplotypeScore=44.5708;InbreedingCoeff=0.8451;MQ=30.99;MQ0=60;MQRankSum=-6.513;QD=12.10;ReadPosRankSum=3.215;VQSLOD=-0.6349;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,9:15:13.79:133,14,0	1/1:1,5:5:12.02:116,12,0	0/0:10,0:1:3.01:0,3,36	0/0:11,1:1:0:0,0,0	0/0:21,0:19:21.44:0,21,220	1/1:7,8:6:15.02:145,15,0	1/1:2,11:12:33.02:318,33,0	1/1:7,15:15:23.80:226,24,0	0/0:11,0:10:22.31:0,22,256	1/1:7,10:14:27.03:260,27,0	1/1:5,8:10:15.02:144,15,0	1/1:5,13:17:28.60:265,29,0	1/1:2,6:7:15.02:145,15,0	1/1:2,9:10:14.97:133,15,0	1/1:2,2:3:5.68:40,6,0	1/1:6,7:8:21:193,21,0	1/1:4,13:13:29.71:288,30,0	1/1:3,8:9:9.01:87,9,0	0/0:18,0:12:19.23:0,19,194	0/0:16,0:12:19.55:0,20,199	0/0:5,0:3:6:0,6,60	1/1:4,3:6:5.98:58,6,0	1/1:3,12:13:18.02:173,18,0	1/1:5,5:9:5.05:56,5,0	1/1:0,6:6:15.02:144,15,0	0/0:19,0:14:24.95:0,25,280	0/0:15,0:15:19.61:0,20,220	0/0:20,0:16:32.38:0,32,280
chr10	92609774	.	T	TGGTAA	2464.94	PASS	AB=0.600;AC=7;AF=0.130;AN=54;BaseQRankSum=7.109;DP=295;FS=17.303;HRun=0;HaplotypeScore=64.6807;InbreedingCoeff=0.6736;MQ=42.19;MQ0=25;MQRankSum=-6.303;QD=56.02;ReadPosRankSum=0.166;VQSLOD=2.5783;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:24.08:0,24,534	0/0:9,0:8:18.06:0,18,401	0/0:18,0:2:5.85:0,6,76	./.	0/0:16,0:16:39.08:0,39,781	1/1:2,7:7:21.07:598,21,0	0/1:5,10:13:25.89:984,0,26	1/1:7,6:7:21.07:623,21,0	0/0:9,0:8:18.06:0,18,401	0/0:12,0:12:36.08:0,36,740	0/0:10,0:10:27.09:0,27,602	0/0:14,0:14:33.11:0,33,734	0/0:9,0:9:11.96:0,12,267	0/0:8,0:6:9.03:0,9,201	0/0:4,0:4:9.02:0,9,159	1/1:1,6:6:15.05:403,15,0	0/0:17,0:16:39.13:0,39,869	0/0:12,0:11:24.08:0,24,535	0/0:9,0:7:21.07:0,21,424	0/0:13,0:12:27.09:0,27,587	0/0:6,0:5:12.04:0,12,268	0/0:2,0:2:6.02:0,6,134	0/0:12,0:12:33.11:0,33,730	0/0:4,0:3:3.01:0,3,67	0/0:8,0:8:15.05:0,15,305	0/0:14,0:13:39.13:0,39,870	0/0:12,0:12:33.11:0,33,714	0/0:5,0:4:12.04:0,12,268
chr10	92609777	.	GCTT	G	933	PASS	AB=0.565;AC=7;AF=0.130;AN=54;BaseQRankSum=8.003;DP=283;FS=15.532;HRun=0;HaplotypeScore=54.7139;InbreedingCoeff=0.6825;MQ=43.70;MQ0=21;MQRankSum=-5.919;QD=28.27;ReadPosRankSum=1.207;VQSLOD=2.1661;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:24.08:0,24,566	0/0:8,0:7:18.06:0,18,425	0/0:15,0:2:5.51:0,6,62	./.	0/0:16,0:16:39.13:0,39,921	1/1:0,7:7:21.07:290,21,0	0/1:3,10:11:99:334,0,108	1/1:1,6:6:18.06:267,18,0	0/0:9,0:8:18.06:0,18,426	0/0:12,0:12:33.11:0,33,759	0/0:10,0:10:27.09:0,27,637	0/0:14,0:14:33.11:0,33,745	0/0:8,0:8:14.93:0,15,354	0/0:7,0:6:9.03:0,9,212	0/0:5,0:5:12.04:0,12,262	1/1:0,6:5:15.04:185,15,0	0/0:17,0:16:39.13:0,39,879	0/0:13,0:12:27.09:0,27,587	0/0:8,0:7:21.07:0,21,473	0/0:12,0:11:27.09:0,27,637	0/0:6,0:5:12.03:0,12,284	0/0:2,0:2:6.02:0,6,141	0/0:13,0:13:36.07:0,36,774	0/0:4,0:3:3.01:0,3,71	0/0:9,0:9:24.08:0,24,510	0/0:16,0:14:42.14:0,42,959	0/0:12,0:12:33.06:0,33,728	0/0:5,0:4:12.04:0,12,284
chr10	92611094	.	GT	G	169.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.846;DP=540;FS=1.443;HRun=2;HaplotypeScore=59.6752;InbreedingCoeff=0.9016;MQ=79.11;MQ0=0;MQRankSum=-4.726;QD=21.13;ReadPosRankSum=0.404;VQSLOD=3.5843;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:24.06:262,24,0	0/0:15,0:15:45.15:0,45,671	0/0:15,0:15:45.08:0,45,609	0/0:16,0:16:41.81:0,42,571	0/0:13,0:13:39.13:0,39,583	0/0:10,0:10:30.10:0,30,450	0/0:17,0:17:51.17:0,51,763	0/0:31,0:31:90.75:0,91,1296	0/0:19,0:19:57.18:0,57,834	0/0:25,0:25:72.20:0,72,1038	0/0:14,0:14:39.13:0,39,575	0/0:28,0:28:84.28:0,84,1254	0/0:14,0:14:39.13:0,39,585	0/0:26,0:26:72.24:0,72,1074	0/0:26,0:26:75.25:0,75,1113	0/0:17,0:17:51.17:0,51,765	0/0:35,0:35:99:0,99,1459	0/0:15,0:15:45.15:0,45,674	0/0:19,0:19:54.14:0,54,742	0/0:12,0:12:36.11:0,36,519	0/0:34,0:34:99:0,102,1528	0/0:19,0:19:57.19:0,57,849	0/0:11,0:11:27.09:0,27,405	0/0:31,0:31:93.31:0,93,1376	0/0:13,0:13:36.12:0,36,540	0/0:29,0:29:87.29:0,87,1299	0/0:25,0:25:72.24:0,72,1078	0/0:3,0:3:6.02:0,6,90
chr10	92611389	.	C	CT	1209.17	PASS	AB=0.533;AC=7;AF=0.135;AN=52;BaseQRankSum=-7.949;DP=250;FS=10.278;HRun=7;HaplotypeScore=24.0925;InbreedingCoeff=0.7406;MQ=56.11;MQ0=1;MQRankSum=-1.117;QD=24.68;ReadPosRankSum=-1.230;VQSLOD=1.9349;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:36.05:0,36,343	0/0:4,0:4:12.02:0,12,116	./.	./.	0/0:14,0:14:42.04:0,42,396	1/1:0,14:14:30.09:362,30,0	1/1:0,9:9:24.07:288,24,0	1/1:2,16:17:42.13:507,42,0	0/0:7,0:7:18.03:0,18,174	0/0:14,0:14:42.07:0,42,405	0/0:11,0:11:30.04:0,30,286	0/0:7,0:7:18.03:0,18,173	0/0:10,0:10:21.03:0,21,203	0/0:2,0:2:3:0,3,29	0/0:9,0:9:24.02:0,24,225	0/1:1,7:8:7.87:196,0,8	0/0:15,0:15:45.01:0,45,418	0/0:9,0:9:24.01:0,24,224	0/0:9,0:9:24.03:0,24,232	0/0:9,0:9:21.03:0,21,202	0/0:6,0:6:15.02:0,15,145	0/0:7,0:7:18.02:0,18,170	0/0:10,0:10:24.02:0,24,226	0/0:2,0:2:3:0,3,29	0/0:9,0:9:27.04:0,27,261	0/0:12,0:12:33.03:0,33,312	0/0:10,0:10:30.05:0,30,287	0/0:4,0:4:12.02:0,12,116
chr10	92611940	.	AT	A	5944.06	PASS	AB=0.724;AC=34;AF=0.607;AN=56;BaseQRankSum=4.874;DP=509;FS=16.556;HRun=10;HaplotypeScore=61.0346;InbreedingCoeff=0.8911;MQ=66.83;MQ0=0;MQRankSum=-1.017;QD=19.55;ReadPosRankSum=1.360;VQSLOD=4.0153;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:41:99:0,103,569	1/1:4,9:13:29.99:259,30,0	0/0:8,0:8:21.06:0,21,232	0/1:7,1:7:9.44:9,0,109	0/0:25,0:25:66.17:0,66,723	1/1:4,14:18:41.99:364,42,0	1/1:3,17:20:41.98:364,42,0	1/1:6,22:28:65.91:563,66,0	0/0:8,0:8:24.06:0,24,265	1/1:4,9:13:32.98:284,33,0	1/1:2,12:14:32.99:286,33,0	1/1:2,15:17:44.99:390,45,0	1/1:3,15:18:44.98:391,45,0	1/1:1,11:12:29.99:260,30,0	1/1:1,15:16:41.99:365,42,0	1/1:2,9:11:26.98:234,27,0	1/1:2,29:30:68.98:599,69,0	1/1:2,22:24:53.94:462,54,0	0/0:23,0:24:60:0,60,645	0/0:21,0:21:57.13:0,57,614	0/0:23,0:23:51.13:0,51,556	1/1:2,7:9:17.88:140,18,0	1/1:4,12:16:32.89:277,33,0	1/1:3,19:22:53.99:469,54,0	0/1:3,11:14:0.19:227,0,0	0/0:33,1:34:61.08:0,61,869	0/0:12,0:12:30.05:0,30,315	0/0:9,0:9:27.07:0,27,299
chr10	92612126	.	A	AAAACAAAC	13283.72	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-1.660;DP=497;FS=16.225;HRun=0;HaplotypeScore=110.9035;InbreedingCoeff=0.8675;MQ=54.07;MQ0=6;MQRankSum=-9.564;QD=38.84;ReadPosRankSum=-1.854;VQSLOD=3.0917;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:55:98.94:898,99,0	1/1:6,5:10:15.01:451,15,0	0/0:21,0:20:6.90:0,7,412	0/0:23,0:19:39.04:0,39,743	0/0:17,0:17:33.11:0,33,849	1/1:4,9:14:18.06:681,18,0	1/1:5,8:15:12.04:501,12,0	1/1:16,7:23:36.01:872,36,0	0/0:7,0:7:12.04:0,12,311	1/1:7,4:11:27.02:821,27,0	1/1:5,8:13:24:824,24,0	1/1:7,4:11:24:713,24,0	1/1:6,7:12:21.07:878,21,0	1/1:6,9:17:27.09:1116,27,0	1/1:9,11:21:33.11:1378,33,0	1/1:4,6:10:15.05:627,15,0	1/1:19,3:25:15.05:599,15,0	1/1:11,5:14:9.03:376,9,0	0/0:16,0:16:36.09:0,36,831	0/0:17,0:17:33.09:0,33,710	0/0:28,0:28:60.15:0,60,1362	1/1:4,7:12:15.05:626,15,0	1/1:5,13:18:12.04:491,12,0	1/1:10,9:18:12.04:358,12,0	1/1:10,6:17:30.03:1049,30,0	0/1:17,0:17:24.46:24,0,739	0/0:15,0:15:33.11:0,33,824	0/0:11,0:11:33.11:0,33,855
chr10	92612406	.	ATGTG	A	2734.57	PASS	AB=1.000;AC=23;AF=0.426;AN=54;BaseQRankSum=1.508;DP=529;FS=9.174;HRun=0;HaplotypeScore=139.2559;InbreedingCoeff=0.5120;MQ=40.82;MQ0=14;MQRankSum=4.748;QD=9.24;ReadPosRankSum=4.667;VQSLOD=1.6851;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:13:2.88:0,3,23	0/1:8,0:7:3.02:3,0,10	0/0:40,0:11:3.01:0,3,72	0/0:34,0:9:6.02:0,6,118	1/1:10,7:17:20.21:293,20,0	0/0:6,0:6:11.54:0,12,141	0/1:22,0:20:5.36:17,0,5	0/0:17,0:13:15.05:0,15,273	1/1:4,9:14:30.10:451,30,0	0/0:21,0:21:48.62:0,49,864	0/1:13,0:13:0.31:0,0,0	0/0:10,0:10:3.01:0,3,31	./.	0/0:12,0:11:3:0,3,25	0/1:25,0:24:21.87:22,0,39	0/0:16,0:16:8.46:0,8,115	0/0:16,0:15:3.01:0,3,49	0/0:11,0:11:18.06:0,18,386	1/1:24,2:25:8.31:122,8,0	1/1:12,11:23:8.16:408,8,0	1/1:16,7:23:12.04:191,12,0	0/1:29,0:27:0:0,0,0	0/1:11,0:11:0:0,0,0	0/1:15,0:15:0:0,0,0	0/0:18,0:22:2.70:0,3,51	1/1:10,8:19:27.06:383,27,0	1/1:17,13:31:39.13:601,39,0	1/1:6,10:19:30.08:408,30,0
chr10	92612426	.	G	GTA	603.09	PASS	AB=0.827;AC=9;AF=0.161;AN=56;BaseQRankSum=-0.954;DP=528;FS=20.806;HRun=0;HaplotypeScore=118.8889;InbreedingCoeff=0.2828;MQ=46.35;MQ0=13;MQRankSum=0.674;QD=4.79;ReadPosRankSum=-0.344;VQSLOD=1.1591;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:2.17:2,0,42	0/0:4,4:7:6.32:0,6,35	0/0:31,0:13:29.09:0,29,282	0/0:29,0:12:20.88:0,21,190	0/0:16,0:16:32.76:0,33,248	1/1:4,0:7:11.73:161,12,0	0/1:11,16:26:6.56:7,0,27	0/1:12,13:23:99:268,0,134	0/0:12,0:12:35.66:0,36,251	0/0:22,0:22:48.87:0,49,406	0/0:11,0:11:2.46:0,2,23	0/0:12,0:12:14.36:0,14,104	0/0:10,0:9:3:0,3,25	0/0:14,0:12:17.96:0,18,145	0/1:18,0:18:3.38:94,0,3	1/1:14,0:15:5.41:142,5,0	0/1:16,2:17:62.82:63,0,77	0/0:12,0:11:19.33:0,19,160	0/0:21,0:18:50.88:0,51,422	0/0:23,0:23:50.71:0,51,384	0/0:26,0:25:50.77:0,51,393	0/0:31,0:29:23.77:0,24,197	0/0:16,0:16:14.92:0,15,121	0/0:17,0:17:11.66:0,12,95	0/0:24,0:22:1.91:0,2,64	0/0:23,0:23:68.65:0,69,539	0/0:27,0:27:68.56:0,69,509	0/0:17,0:17:41.65:0,42,296
chr10	92612503	.	A	AGTGT	2513.52	PASS	AB=0.886;AC=28;AF=0.538;AN=52;BaseQRankSum=6.080;DP=598;FS=14.007;HRun=0;HaplotypeScore=155.7287;InbreedingCoeff=0.6388;MQ=65.07;MQ0=13;MQRankSum=-2.911;QD=8.55;ReadPosRankSum=-1.079;VQSLOD=2.2546;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:27:5.94:86,6,0	1/1:3,7:9:21.04:419,21,0	0/0:62,0:34:39.10:0,39,578	0/1:47,0:30:34.16:34,0,175	0/0:25,0:28:63.19:0,63,952	1/1:12,0:12:6.02:103,6,0	1/1:20,0:20:12:132,12,0	./.	0/0:13,0:19:54.14:0,54,746	1/1:16,0:15:6.02:89,6,0	0/0:11,0:11:0.47:0,0,1	1/1:15,0:15:8.88:68,9,0	1/1:10,0:10:6.02:99,6,0	./.	0/1:12,4:16:35.46:444,0,35	1/1:28,0:28:24.05:401,24,0	1/1:6,12:21:24.04:479,24,0	1/1:6,0:5:3.01:49,3,0	0/0:20,0:19:29.99:0,30,448	0/0:12,0:14:33.09:0,33,486	0/0:47,0:50:99:0,117,1732	1/1:26,0:27:17.30:183,17,0	1/1:18,0:18:2.68:33,3,0	0/0:19,0:19:1.20:0,1,3	1/1:14,0:18:6.01:79,6,0	0/0:25,0:26:57.18:0,57,893	0/0:27,0:28:60.18:0,60,918	0/0:6,0:6:9.03:0,9,146
chr10	92613292	.	A	AG	16709.29	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-13.708;DP=667;FS=4.199;HRun=2;HaplotypeScore=67.0126;InbreedingCoeff=0.9998;MQ=84.27;MQ0=0;MQRankSum=-3.810;QD=36.48;ReadPosRankSum=2.786;VQSLOD=5.6552;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,54:55:99:2181,154,0	1/1:0,12:12:27.09:389,27,0	0/0:19,0:19:51.14:0,51,607	0/0:23,0:23:59.18:0,59,678	0/0:18,0:18:48.12:0,48,579	1/1:1,27:27:69.23:993,69,0	1/1:2,32:35:93.31:1332,93,0	1/1:6,27:33:69.19:953,69,0	0/0:20,0:20:60.19:0,60,743	1/1:1,14:16:45.15:636,45,0	1/1:0,20:20:51.17:734,51,0	1/1:0,21:21:54.18:777,54,0	1/1:0,20:20:57.19:820,57,0	1/1:4,27:32:78.26:1118,78,0	1/1:0,26:26:72.24:1033,72,0	1/1:0,17:17:48.16:691,48,0	1/1:2,43:44:99:1598,111,0	1/1:1,21:22:57.19:821,57,0	0/0:16,0:16:36.10:0,36,435	0/0:22,0:22:66.21:0,66,817	0/0:29,0:29:81.24:0,81,989	1/1:1,20:21:48.16:691,48,0	1/1:0,20:20:54.17:777,54,0	1/1:1,19:20:45.15:648,45,0	1/1:1,14:15:36.12:518,36,0	0/0:24,0:24:66.19:0,66,797	0/0:22,0:22:66.21:0,66,818	0/0:16,0:16:48.13:0,48,582
chr10	92613383	.	CTGTG	C	3826.44	PASS	AB=1.000;AC=49;AF=0.942;AN=52;BaseQRankSum=1.748;DP=572;FS=1.863;HRun=0;HaplotypeScore=161.3743;InbreedingCoeff=0.0749;MQ=54.38;MQ0=18;MQRankSum=-2.312;QD=7.50;ReadPosRankSum=-1.772;VQSLOD=2.7764;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:31:6.29:41,0,6	1/1:8,0:8:6.02:68,6,0	./.	0/0:18,0:9:0:0,0,0	1/1:8,11:19:6.02:94,6,0	1/1:8,0:8:2.82:27,3,0	1/1:19,0:26:21.02:195,21,0	./.	1/1:12,9:21:12.51:169,13,0	1/1:22,0:22:21.02:195,21,0	1/1:18,0:18:6.01:56,6,0	1/1:24,0:24:30.03:279,30,0	1/1:28,0:28:27.03:251,27,0	1/1:19,0:19:21.02:195,21,0	1/1:16,0:17:21.03:226,21,0	1/1:15,0:23:27.02:248,27,0	1/1:33,0:32:23.66:270,24,0	1/1:15,0:15:6.01:56,6,0	1/1:14,1:14:6.01:75,6,0	1/1:11,4:16:9.03:140,9,0	1/1:19,11:29:2.97:47,3,0	1/1:24,0:24:21.02:193,21,0	1/1:14,0:14:5.97:53,6,0	1/1:24,0:24:5.75:40,6,0	1/1:13,0:13:11.85:98,12,0	1/1:14,15:29:31.13:565,31,0	1/1:15,0:14:14.93:160,15,0	1/1:5,0:4:6.02:86,6,0
chr10	92613408	.	TGTGTGTGTGTGTGTGTGTGC	T	9294.21	PASS	AB=0.777;AC=20;AF=0.357;AN=56;BaseQRankSum=5.919;DP=590;FS=43.361;HRun=0;HaplotypeScore=255.5454;InbreedingCoeff=0.7603;MQ=50.59;MQ0=23;MQRankSum=-5.323;QD=42.25;ReadPosRankSum=3.975;VQSLOD=2.8761;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:40:48.60:0,49,2469	0/0:7,0:7:6.02:0,6,222	0/0:12,0:4:2.20:0,2,262	0/0:14,0:5:4.28:0,4,288	0/0:21,0:20:24.55:0,25,1181	0/0:14,0:11:14.58:0,15,211	0/0:31,0:29:50.19:0,50,467	0/0:20,0:18:16.92:0,17,473	0/0:23,0:22:36.03:0,36,1532	1/1:3,19:22:47.95:1431,48,0	1/1:4,11:15:8.94:358,9,0	1/1:19,8:26:51.11:1995,51,0	1/1:3,19:22:27.09:1512,27,0	1/1:4,18:22:21.07:1171,21,0	0/1:18,0:18:0.08:0,0,1094	0/0:24,0:24:10.07:0,10,350	0/0:38,0:37:39.34:0,39,1138	1/1:5,9:14:6.02:342,6,0	0/0:14,0:12:29.12:0,29,1145	0/0:15,0:15:32.98:0,33,1315	0/0:34,0:32:42.08:0,42,1757	1/1:6,13:19:21.07:1167,21,0	1/1:1,11:12:6.49:338,6,0	0/1:7,29:36:33.10:312,0,33	1/1:1,12:12:12.04:667,12,0	0/0:36,0:31:90.31:0,90,4891	0/0:14,0:13:36.12:0,36,1844	0/0:10,0:9:24.07:0,24,1203
chr10	92613428	.	C	CGCGT	828.79	PASS	AB=0.810;AC=10;AF=0.179;AN=56;BaseQRankSum=-0.829;DP=533;FS=32.618;HRun=0;HaplotypeScore=172.0924;InbreedingCoeff=0.6507;MQ=60.03;MQ0=13;MQRankSum=-1.073;QD=6.28;ReadPosRankSum=-1.835;VQSLOD=1.0084;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,22:38:37.33:57,0,37	1/1:8,0:8:10.97:104,11,0	0/0:5,0:3:4.67:0,5,54	0/1:9,0:7:10.61:11,0,36	0/0:24,0:23:36.58:0,37,633	0/0:13,0:12:20.86:0,21,160	0/0:27,0:26:56.66:0,57,484	1/1:22,0:20:27.34:167,27,0	0/0:22,0:22:33.11:0,33,593	0/0:19,0:19:41.89:0,42,340	0/0:12,0:12:8.90:0,9,62	0/0:23,0:22:47.78:0,48,399	0/0:22,0:22:26.99:0,27,232	0/0:19,0:19:20.92:0,21,171	1/1:21,0:21:40.32:539,40,0	0/0:20,0:20:41.88:0,42,394	1/1:30,3:33:19.44:114,19,0	0/0:9,0:9:5.99:0,6,51	0/0:11,0:11:26.13:0,26,396	0/0:13,0:13:29.81:0,30,525	0/0:33,0:31:51.16:0,51,915	0/0:15,0:15:20.97:0,21,175	0/0:11,0:11:6.43:0,6,46	0/0:30,0:30:5.92:0,6,43	0/0:13,0:12:11.94:0,12,96	0/0:37,0:34:76.35:0,76,1179	0/0:10,0:9:21.41:0,21,288	0/0:13,0:12:30.16:0,30,412
chr10	92613432	.	C	CGT	1905.25	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-3.137;DP=549;FS=29.692;HRun=0;HaplotypeScore=151.6273;InbreedingCoeff=0.7779;MQ=61.96;MQ0=10;MQRankSum=0.668;QD=20.71;ReadPosRankSum=-1.119;VQSLOD=1.9737;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:35.61:0,36,267	0/0:8,0:8:8.91:0,9,60	0/0:6,0:4:5.61:0,6,59	0/1:10,0:8:5.27:5,0,27	0/0:23,0:22:39.10:0,39,529	1/1:13,0:12:24.04:322,24,0	1/1:26,0:26:51.76:666,52,0	1/1:5,17:21:47.95:550,48,0	0/0:21,0:21:39.07:0,39,519	0/0:21,0:21:50.60:0,51,502	0/0:12,0:12:17.95:0,18,151	0/0:27,0:26:57.07:0,57,558	0/0:24,0:24:41.95:0,42,369	0/0:22,0:22:26.85:0,27,219	0/0:22,0:22:10.85:0,11,151	1/1:21,0:21:52.20:522,52,0	0/0:34,0:34:29.46:0,29,194	0/0:10,0:10:6.01:0,6,57	0/0:10,0:10:23.87:0,24,315	0/0:16,0:16:36.01:0,36,462	0/0:33,0:31:60.12:0,60,790	0/0:19,0:19:26.92:0,27,239	0/0:10,0:10:6:0,6,56	0/0:31,0:31:8.98:0,9,82	0/0:12,0:11:12.02:0,12,117	0/0:35,0:33:83.22:0,83,1000	0/0:10,0:9:18.04:0,18,228	0/0:11,0:10:29.82:0,30,326
chr10	92615326	.	AC	A	704.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.361;DP=507;FS=20.696;HRun=1;HaplotypeScore=67.9908;InbreedingCoeff=0.9538;MQ=62.42;MQ0=1;MQRankSum=-1.063;QD=30.63;ReadPosRankSum=0.812;VQSLOD=2.0801;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:23:59.69:799,60,0	0/0:9,0:9:27.09:0,27,431	0/0:12,0:7:18.06:0,18,287	0/0:9,0:8:21.07:0,21,296	0/0:37,0:37:99:0,111,1725	0/0:25,0:25:75.18:0,75,1103	0/0:10,0:10:30.09:0,30,456	0/0:47,0:46:99:0,131,2025	0/0:9,0:8:24.08:0,24,383	0/0:20,0:20:56.40:0,56,390	0/0:21,0:21:62.73:0,63,479	0/0:13,0:13:38.85:0,39,303	0/0:11,0:11:32.85:0,33,250	0/0:15,0:15:44.81:0,45,343	0/0:17,0:17:51.16:0,51,784	0/0:21,0:21:63.20:0,63,980	0/0:22,0:22:63.21:0,63,1006	0/0:26,0:26:71.77:0,72,570	0/0:32,0:32:96.32:0,96,1491	0/0:17,0:17:51.14:0,51,761	0/0:8,0:8:24.08:0,24,371	0/0:5,0:5:14.94:0,15,115	0/0:10,0:10:23.91:0,24,185	0/0:7,0:7:20.94:0,21,166	0/0:14,0:14:41.82:0,42,318	0/0:30,0:30:90.29:0,90,1363	0/0:31,0:31:93.32:0,93,1485	0/0:6,0:6:18.06:0,18,287
chr10	92615571	.	CAG	C	8062.48	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.329;DP=739;FS=2.266;HRun=0;HaplotypeScore=87.5680;InbreedingCoeff=0.9995;MQ=72.64;MQ0=0;MQRankSum=-2.749;QD=41.56;ReadPosRankSum=0.642;VQSLOD=6.6093;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,159,2852	1/1:0,13:13:36.12:551,36,0	0/0:22,0:21:47.17:0,47,701	0/0:18,0:18:44.51:0,45,778	0/0:29,0:29:81.28:0,81,1564	1/1:0,22:22:63.21:964,63,0	1/1:0,30:31:81.28:1239,81,0	1/1:2,27:29:81.24:1175,81,0	0/0:28,0:28:84.29:0,84,1619	0/0:30,0:30:87.29:0,87,1617	0/0:18,0:18:54.19:0,54,1043	0/0:35,0:35:99:0,105,2027	0/0:19,0:19:54.17:0,54,994	0/0:35,0:35:99:0,105,1922	1/1:0,42:42:99:1745,114,0	1/1:0,28:28:78.26:1194,78,0	1/1:1,28:29:78.26:1194,78,0	0/0:23,0:23:69.24:0,69,1317	0/0:20,0:20:57.17:0,57,1038	0/0:23,0:23:66.21:0,66,1233	0/0:34,0:34:99:0,99,1901	0/0:15,0:15:45.14:0,45,833	0/0:25,0:25:72.23:0,72,1333	0/0:31,0:31:87.30:0,87,1656	0/0:11,0:11:30.10:0,30,579	0/0:32,0:32:96.33:0,96,1854	0/0:34,0:34:96.33:0,96,1831	0/0:9,0:9:24.06:0,24,429
chr10	92616031	.	ACCCCC	A	7929.89	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-2.707;DP=527;FS=11.534;HRun=13;HaplotypeScore=115.5250;InbreedingCoeff=0.9770;MQ=67.37;MQ0=1;MQRankSum=-5.088;QD=35.40;ReadPosRankSum=6.722;VQSLOD=2.1899;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:34:0,34,573	0/0:3,0:5:11.03:0,11,58	0/0:24,0:21:38.80:0,39,688	0/0:11,0:8:19.73:0,20,308	0/0:7,0:8:14.35:0,14,223	0/0:3,0:7:18.04:0,18,228	0/0:8,0:27:50.16:0,50,604	0/0:12,0:13:10.57:0,11,106	0/0:15,0:16:33.09:0,33,505	1/1:2,17:19:51.14:855,51,0	1/1:7,11:18:26.79:445,27,0	1/1:3,29:32:78.24:1334,78,0	1/1:3,21:24:63.19:1078,63,0	1/1:10,22:32:59.95:1026,60,0	0/0:6,0:25:47.93:0,48,255	0/0:11,0:20:45.11:0,45,553	0/0:12,0:36:37.47:0,37,298	1/1:1,17:18:42.13:703,42,0	0/0:9,0:13:30.07:0,30,364	0/0:5,0:8:15.04:0,15,180	0/0:21,0:35:35.37:0,35,493	1/1:3,14:17:30.10:513,30,0	1/1:5,11:16:23.95:348,24,0	1/1:5,30:35:75.20:1269,75,0	1/1:2,11:13:21.05:359,21,0	0/0:6,0:11:23.98:0,24,246	0/0:8,0:14:32.75:0,33,364	0/0:8,0:8:15:0,15,157
chr10	92618368	.	GACCAAAAAAA	G	325.82	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-1.926;DP=440;FS=20.348;HRun=0;HaplotypeScore=159.1128;InbreedingCoeff=0.2855;MQ=41.63;MQ0=23;MQRankSum=3.527;QD=5.09;ReadPosRankSum=-0.805;VQSLOD=1.4797;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:45.34:0,45,1370	0/0:8,0:8:21.04:0,21,580	0/1:18,0:4:9.69:10,0,103	0/0:12,0:3:6.01:0,6,68	0/0:25,0:25:57.54:0,58,1503	0/0:16,0:16:22.15:0,22,984	0/0:16,0:16:28.97:0,29,918	1/1:3,12:14:29.23:398,29,0	0/0:16,0:16:18.38:0,18,1288	0/0:19,0:19:32.42:0,32,1325	0/0:15,0:15:23.72:0,24,747	0/0:20,0:20:47.93:0,48,1638	0/0:9,0:9:21.07:0,21,736	0/0:10,0:10:27.08:0,27,879	0/0:14,0:14:25.75:0,26,974	0/0:15,0:16:42.23:0,42,1120	0/1:28,0:26:22.37:22,0,747	0/0:7,0:13:4.17:0,4,192	0/0:21,0:19:45.65:0,46,1434	0/0:19,0:18:36.53:0,37,1022	0/1:3,0:3:15.80:16,0,95	0/0:14,0:13:22.65:0,23,696	0/0:11,0:10:8.06:0,8,644	0/0:6,0:6:12.50:0,12,391	0/0:23,0:23:39.99:0,40,2232	0/0:24,0:24:21.65:0,22,1622	0/0:18,0:18:45.40:0,45,1510	0/0:11,0:10:29.84:0,30,818
chr10	92618482	.	TG	T	11429.79	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-0.307;DP=665;FS=8.938;HRun=4;HaplotypeScore=84.4417;InbreedingCoeff=0.9981;MQ=75.11;MQ0=0;MQRankSum=-0.870;QD=30.98;ReadPosRankSum=3.893;VQSLOD=5.0695;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,52:52:99:1706,144,0	0/0:10,0:10:27.06:0,27,357	0/0:14,0:14:39.13:0,39,546	0/0:19,0:19:45.73:0,46,610	0/0:24,0:24:63.18:0,63,845	1/1:1,22:23:63.19:755,63,0	1/1:2,29:31:81.18:951,81,0	0/0:30,0:30:84.28:0,84,1175	0/0:24,0:24:63.20:0,63,858	1/1:2,27:29:84.25:1000,84,0	1/1:2,18:20:51.09:594,51,0	1/1:1,23:24:63.07:720,63,0	1/1:2,21:23:63.19:754,63,0	1/1:0,25:25:69.17:812,69,0	0/0:27,0:27:80.28:0,80,1060	1/1:1,17:18:42.13:504,42,0	0/0:26,0:26:78.24:0,78,1073	1/1:0,27:27:66.20:792,66,0	0/0:17,0:17:45.13:0,45,611	0/0:16,0:16:45.15:0,45,622	0/0:35,0:35:99:0,99,1381	1/1:1,24:25:69.21:828,69,0	1/1:0,14:14:30.09:360,30,0	1/1:0,38:38:96.29:1151,96,0	1/1:0,20:20:42.13:504,42,0	0/0:18,1:19:18.16:0,18,648	0/0:28,0:27:78.25:0,78,1075	0/0:7,0:7:21.07:0,21,294
chr10	92618510	.	TC	T	5030.76	PASS	AB=0.543;AC=15;AF=0.268;AN=56;BaseQRankSum=-3.690;DP=647;FS=26.207;HRun=3;HaplotypeScore=95.8270;InbreedingCoeff=0.9022;MQ=65.22;MQ0=0;MQRankSum=0.495;QD=32.67;ReadPosRankSum=1.551;VQSLOD=2.9289;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,172,2443	0/0:10,0:10:27.09:0,27,389	0/0:19,0:20:42.76:0,43,565	0/0:24,0:24:36.09:0,36,683	1/1:0,19:19:51.16:632,51,0	0/0:24,0:24:69.23:0,69,991	0/0:33,0:33:90.30:0,90,1294	0/0:27,0:27:81.26:0,81,1141	1/1:1,23:24:23.01:738,23,0	0/0:23,0:23:63.20:0,63,888	0/0:16,0:16:45.15:0,45,645	0/0:28,0:28:75.25:0,75,1079	0/0:20,0:20:51.17:0,51,733	0/0:22,0:22:60.20:0,60,862	0/0:29,0:28:75.24:0,75,1063	0/0:14,0:14:33.11:0,33,474	0/0:26,0:26:78.26:0,78,1123	0/0:31,0:31:81.22:0,81,1120	1/1:0,16:15:45.14:558,45,0	1/1:1,13:14:33.10:408,33,0	1/1:1,40:41:99:1413,114,0	0/0:20,0:20:60.20:0,60,863	0/0:12,0:12:33.11:0,33,475	0/0:36,0:36:99:0,102,1467	0/0:16,0:16:24.08:0,24,346	0/1:3,16:19:72.47:538,0,72	1/1:0,17:17:48.15:595,48,0	1/1:0,4:4:12.04:149,12,0
chr10	92618979	.	AGAG	A	689.28	PASS	AB=0.956;AC=19;AF=0.396;AN=48;BaseQRankSum=0.377;DP=443;FS=23.122;HRun=0;HaplotypeScore=58.2561;InbreedingCoeff=-0.1434;MQ=35.27;MQ0=191;MQRankSum=2.214;QD=2.45;ReadPosRankSum=4.936;VQSLOD=-0.1645;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:9:12.49:0,12,135	1/1:6,3:5:3.01:37,3,0	./.	0/1:19,0:6:0:0,0,0	0/1:16,0:9:65.56:72,0,66	0/1:21,0:10:25.02:25,0,65	0/1:21,0:7:14.19:14,0,18	0/0:14,0:6:0:0,0,0	1/1:11,0:6:4.26:45,4,0	1/1:21,0:4:1.22:3,1,0	./.	0/0:16,0:10:3:0,3,25	./.	0/0:18,0:8:6.02:0,6,73	0/1:12,3:10:38.52:63,0,39	1/1:12,0:7:0.47:1,0,0	0/1:25,1:14:4.90:148,0,5	0/0:13,0:5:2.98:0,3,21	0/1:14,3:7:22.62:97,0,23	./.	0/1:35,0:16:2.62:134,0,3	0/0:12,0:4:3.01:0,3,39	0/0:7,0:4:0:0,0,0	0/0:17,0:8:3:0,3,25	0/0:17,0:6:3.01:0,3,41	0/1:25,1:9:23.57:70,0,24	0/1:8,0:6:33.06:33,0,57	0/1:22,1:8:34.29:70,0,34
chr10	92619127	.	CCTA	C	9210.50	PASS	AB=0.579;AC=27;AF=0.482;AN=56;BaseQRankSum=13.342;DP=508;FS=0.380;HRun=0;HaplotypeScore=87.2374;InbreedingCoeff=0.9050;MQ=80.54;MQ0=0;MQRankSum=-4.998;QD=41.30;ReadPosRankSum=3.659;VQSLOD=5.9825;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:57.19:904,57,0	0/0:12,0:12:36.12:0,36,765	0/0:28,0:25:58.65:0,59,1073	0/0:28,0:20:3.23:0,3,708	0/0:24,0:24:66.21:0,66,1366	1/1:1,22:23:63.21:1012,63,0	1/1:1,17:18:48.16:771,48,0	0/0:21,0:21:60.21:0,60,1318	0/0:18,0:18:54.19:0,54,1192	1/1:1,19:20:54.17:843,54,0	1/1:1,12:13:36.12:578,36,0	1/1:0,11:11:27.09:434,27,0	1/1:0,15:15:42.14:675,42,0	1/1:2,11:13:30.10:482,30,0	0/0:15,0:15:42.14:0,42,914	1/1:2,14:16:36.12:579,36,0	0/0:19,0:19:57.20:0,57,1258	0/1:3,8:11:42.57:313,0,43	0/0:22,0:22:57.20:0,57,1241	0/0:14,0:14:42.14:0,42,927	0/0:19,0:19:57.20:0,57,1258	1/1:0,11:11:30.10:482,30,0	1/1:4,15:19:48.12:740,48,0	1/1:0,11:11:30.10:482,30,0	1/1:0,21:21:57.19:915,57,0	0/0:27,1:28:33.09:0,33,1652	0/0:16,0:16:45.15:0,45,986	0/0:21,0:21:63.22:0,63,1376
chr10	92619948	.	TA	T	1427.16	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.666;DP=703;FS=0.000;HRun=1;HaplotypeScore=73.9352;InbreedingCoeff=0.9698;MQ=87.32;MQ0=0;MQRankSum=-5.845;QD=29.73;ReadPosRankSum=2.455;VQSLOD=3.3854;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,46:48:99:1522,119,0	0/0:11,0:11:33.10:0,33,505	0/0:19,0:19:57.15:0,57,883	0/0:28,0:28:84.22:0,84,1222	0/0:28,0:28:84.29:0,84,1340	0/0:16,0:16:48.16:0,48,767	0/0:28,0:28:84.29:0,84,1338	0/0:33,0:33:99:0,99,1557	0/0:37,0:37:99:0,111,1750	0/0:20,0:20:60.19:0,60,913	0/0:27,0:27:81.28:0,81,1291	0/0:33,0:33:99:0,99,1582	0/0:36,0:36:99:0,105,1665	0/0:27,0:27:81.22:0,81,1200	0/0:19,0:19:57.18:0,57,887	0/0:24,0:24:72.25:0,72,1148	0/0:37,0:37:99:0,111,1669	0/0:15,0:15:45.15:0,45,719	0/0:22,0:22:63.20:0,63,985	0/0:18,0:18:54.18:0,54,858	0/0:39,0:39:99:0,117,1866	0/0:11,0:11:33.10:0,33,492	0/0:25,0:25:75.22:0,75,1148	0/0:34,0:34:99:0,102,1598	0/0:22,0:22:66.21:0,66,1033	0/0:23,0:23:69.23:0,69,1082	0/0:19,0:19:57.19:0,57,911	0/0:4,0:4:12.04:0,12,192
chr10	92620439	.	ATGTT	A	1651.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.329;DP=756;FS=1.407;HRun=0;HaplotypeScore=120.6901;InbreedingCoeff=0.9980;MQ=85.56;MQ0=0;MQRankSum=-6.290;QD=38.40;ReadPosRankSum=2.431;VQSLOD=4.0571;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,40:43:99:1746,99,0	0/0:8,0:8:24.08:0,24,616	0/0:33,0:33:84.27:0,84,2024	0/0:33,0:33:75.21:0,75,1673	0/0:33,0:33:93.31:0,93,2294	0/0:28,0:28:72.25:0,72,1806	0/0:19,0:19:48.16:0,48,1199	0/0:37,0:37:99:0,102,2491	0/0:28,0:28:78.27:0,78,1946	0/0:36,0:36:96.33:0,96,2446	0/0:25,0:25:57.20:0,57,1442	0/0:34,0:34:93.32:0,93,2357	0/0:21,0:21:60.21:0,60,1540	0/0:25,0:25:72.23:0,72,1791	0/0:27,0:27:78.23:0,78,1879	0/0:23,0:23:63.22:0,63,1588	0/0:33,0:32:93.32:0,93,2362	0/0:20,0:20:54.16:0,54,1292	0/0:19,0:19:54.17:0,54,1336	0/0:28,0:28:75.21:0,75,1867	0/0:27,0:27:66.23:0,66,1671	0/0:18,0:18:48.15:0,48,1176	0/0:30,0:30:75.26:0,75,1916	0/0:22,0:22:60.21:0,60,1479	0/0:19,0:19:54.19:0,54,1339	0/0:32,0:32:90.31:0,90,2309	0/0:36,0:36:93.32:0,93,2380	0/0:19,0:19:48.16:0,48,1212
chr10	92621615	.	C	CATGT	7568.59	PASS	AB=0.794;AC=49;AF=0.942;AN=52;BaseQRankSum=0.750;DP=552;FS=3.148;HRun=0;HaplotypeScore=143.3216;InbreedingCoeff=0.2527;MQ=69.44;MQ0=3;MQRankSum=-1.838;QD=15.41;ReadPosRankSum=-1.013;VQSLOD=4.6316;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:4.08:0,4,327	1/1:2,0:2:3:25,3,0	./.	./.	1/1:32,0:34:13.92:114,14,0	1/1:28,0:28:30.09:541,30,0	1/1:11,0:11:3:25,3,0	1/1:37,0:37:23.84:212,24,0	1/1:20,0:23:14.47:205,14,0	0/1:20,7:27:16.52:540,0,17	1/1:19,5:24:30.05:540,30,0	1/1:12,4:16:18.02:370,18,0	1/1:11,3:14:9.03:212,9,0	1/1:5,2:7:9.03:211,9,0	1/1:17,5:22:27.01:491,27,0	1/1:12,0:12:9.03:163,9,0	1/1:15,7:21:21.07:494,21,0	1/1:6,8:14:18.06:423,18,0	1/1:15,0:15:6.02:104,6,0	1/1:29,1:39:23.90:370,24,0	1/1:19,0:19:5.05:55,5,0	1/1:5,7:12:12.04:283,12,0	1/1:9,10:19:18.06:424,18,0	1/1:16,2:18:15:191,15,0	1/1:8,0:12:8.87:129,9,0	1/1:27,1:31:44.93:651,45,0	1/1:16,0:25:39.05:587,39,0	1/1:4,0:8:12.04:209,12,0
chr10	92621656	.	A	ATG	2586.64	PASS	AB=0.991;AC=33;AF=0.589;AN=56;BaseQRankSum=-1.377;DP=445;FS=22.963;HRun=0;HaplotypeScore=181.8364;InbreedingCoeff=-0.1554;MQ=46.48;MQ0=2;MQRankSum=1.596;QD=6.57;ReadPosRankSum=1.023;VQSLOD=1.7352;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:4.08:0,4,322	0/1:5,0:5:18.98:19,0,39	0/0:11,0:6:9.02:0,9,111	0/0:6,0:4:5.09:0,5,19	1/1:37,0:37:14.48:115,14,0	1/1:21,0:21:30.02:302,30,0	0/1:13,0:13:13.72:14,0,87	0/1:37,0:36:47.95:48,0,854	0/1:21,0:21:26.87:79,0,27	0/1:16,0:16:99:112,0,286	1/1:17,1:18:29.87:266,30,0	0/1:10,1:11:23.20:125,0,23	0/1:9,0:9:40.86:41,0,115	0/1:8,0:8:7.09:46,0,7	1/1:12,2:14:26.82:228,27,0	0/1:12,0:12:9.08:51,0,9	0/1:15,1:15:20.76:142,0,21	0/1:10,0:9:23.89:97,0,24	0/0:12,0:11:33.10:0,33,463	1/1:35,0:35:20.82:221,21,0	0/1:6,0:6:16.50:16,0,36	1/1:7,0:7:11.87:78,12,0	1/1:13,0:13:17.82:135,18,0	1/1:8,0:8:14.95:140,15,0	1/1:14,0:14:8.80:57,9,0	0/1:30,0:30:99:206,0,577	0/1:23,0:23:87.40:176,0,87	0/1:10,0:10:47.53:48,0,113
chr10	92621667	.	TC	T	780.69	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-6.502;DP=403;FS=13.891;HRun=5;HaplotypeScore=181.2188;InbreedingCoeff=0.5366;MQ=46.62;MQ0=1;MQRankSum=2.827;QD=13.46;ReadPosRankSum=0.047;VQSLOD=1.5386;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:35.90:0,36,383	0/0:4,0:4:8.96:0,9,83	0/0:13,0:8:8.62:0,9,92	0/0:7,0:3:5.99:0,6,49	0/1:28,0:28:1.23:1,0,2	0/0:20,0:20:38.87:0,39,395	0/0:10,0:10:17.04:0,17,195	1/1:3,27:29:78.21:875,78,0	0/0:18,0:18:23.21:0,23,250	0/0:16,0:16:45.15:0,45,608	0/0:16,0:16:11.99:0,12,128	0/0:12,0:12:14.99:0,15,153	0/0:9,0:9:21.03:0,21,265	0/0:8,0:8:15.01:0,15,183	0/0:15,0:15:26.95:0,27,304	0/0:11,0:11:14.96:0,15,162	0/0:19,0:18:25.70:0,26,333	0/0:9,0:8:21.07:0,21,285	0/0:13,0:13:39.13:0,39,525	0/0:28,0:28:8.98:0,9,91	0/0:4,0:4:5.05:0,5,47	0/0:5,0:5:12.04:0,12,164	0/0:12,0:12:14.51:0,15,189	0/0:4,0:4:3.01:0,3,41	0/0:12,0:12:14.88:0,15,114	0/0:25,0:25:72.24:0,72,967	0/0:23,0:23:42.09:0,42,537	0/0:11,0:11:21.03:0,21,260
chr10	92621677	.	CTATATATATA	C	5056.80	PASS	AB=0.667;AC=17;AF=0.327;AN=52;BaseQRankSum=-8.186;DP=372;FS=0.000;HRun=0;HaplotypeScore=186.9702;InbreedingCoeff=0.7109;MQ=53.24;MQ0=2;MQRankSum=0.246;QD=29.23;ReadPosRankSum=1.676;VQSLOD=4.0043;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,10:16:12.04:371,12,0	0/0:0,0:4:11.38:0,11,144	0/0:13,0:9:8.24:0,8,112	0/0:13,0:5:12.03:0,12,185	1/1:5,24:29:2.69:75,3,0	0/0:10,0:18:16.33:0,16,149	0/0:6,0:10:3.54:0,4,57	0/0:21,0:26:50.75:0,51,955	1/1:2,14:16:21.04:578,21,0	0/1:8,0:16:30.48:30,0,181	0/0:4,0:14:2.93:0,3,47	0/0:2,0:8:10.71:0,11,43	0/0:3,0:9:13.60:0,14,121	0/0:2,0:7:11.38:0,11,126	0/0:4,0:13:14.39:0,14,174	0/0:4,0:11:16.73:0,17,133	0/0:7,0:14:8.37:0,8,76	0/0:6,0:8:11.38:0,11,123	1/1:6,8:14:24.08:613,24,0	1/1:7,20:27:20.63:450,21,0	./.	./.	0/0:5,0:10:2.95:0,3,47	0/0:1,0:4:0:0,0,0	0/0:3,0:11:14.39:0,14,144	1/1:5,18:23:54.18:1600,54,0	1/1:7,15:22:24.08:689,24,0	1/1:2,7:9:21.07:650,21,0
chr10	92622785	.	AT	A	5255.88	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=11.262;DP=671;FS=5.348;HRun=9;HaplotypeScore=97.0974;InbreedingCoeff=0.9967;MQ=75.89;MQ0=0;MQRankSum=-1.751;QD=23.78;ReadPosRankSum=3.708;VQSLOD=5.1504;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,141,1615	0/0:0,0:11:22.73:0,23,116	0/0:18,1:18:14.63:0,15,398	0/0:14,0:14:35.76:0,36,372	0/0:26,0:27:72:0,72,795	0/0:24,0:24:72.21:0,72,831	0/0:28,0:28:81.21:0,81,912	0/0:36,0:36:93.28:0,93,1073	0/0:28,0:28:75.17:0,75,828	1/1:0,30:30:90.05:824,90,0	1/1:2,14:16:36:329,36,0	1/1:4,25:30:71.07:638,71,0	1/1:2,11:13:33.02:302,33,0	1/1:1,17:18:45.02:412,45,0	0/0:4,0:25:62.83:0,63,358	0/0:19,0:19:51.13:0,51,569	0/0:6,0:37:82.38:0,82,419	1/1:3,9:12:27.01:247,27,0	0/0:19,0:19:33.10:0,33,381	0/0:18,0:18:51.15:0,51,588	0/0:42,1:43:92.79:0,93,1274	1/1:1,15:16:45.02:412,45,0	1/1:0,17:17:48.03:439,48,0	1/1:0,29:30:83.08:747,83,0	1/1:4,35:39:99:906,99,0	0/0:22,0:22:57.10:0,57,641	0/0:16,0:16:36.11:0,36,415	0/0:11,0:11:33.10:0,33,381
chr10	92623530	.	GACCA	G	1725.88	PASS	AB=0.991;AC=34;AF=0.630;AN=54;BaseQRankSum=-4.801;DP=479;FS=28.082;HRun=0;HaplotypeScore=113.8974;InbreedingCoeff=-0.5013;MQ=42.95;MQ0=16;MQRankSum=5.784;QD=3.68;ReadPosRankSum=-2.232;VQSLOD=0.0388;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,1:27:31.91:323,0,32	1/1:4,1:7:14.98:155,15,0	1/1:13,0:2:2.80:13,3,0	./.	0/1:30,0:30:99:113,0,178	1/1:8,5:14:18.26:163,18,0	1/1:8,0:9:3.01:7,3,0	0/1:23,0:23:9.11:9,0,280	0/1:17,0:17:4.51:5,0,197	0/1:22,0:22:51.84:52,0,217	0/1:27,0:25:8.41:8,0,220	0/1:14,0:13:16.25:16,0,119	0/1:14,0:14:13.28:13,0,212	0/1:14,0:13:68.60:87,0,69	1/1:10,0:12:23.90:261,24,0	1/1:9,9:18:15.28:130,15,0	1/1:22,0:21:16.93:71,17,0	0/1:14,0:13:10.28:10,0,114	0/1:23,0:19:85.85:86,0,103	0/1:22,0:22:23.10:23,0,226	0/1:10,0:10:3:3,0,34	0/1:11,0:11:24.98:25,0,59	0/1:16,0:16:54.11:54,0,144	0/1:14,0:14:6.36:25,0,6	0/1:14,0:13:16.64:17,0,70	0/1:30,0:29:90.36:90,0,186	0/1:17,0:16:62.80:73,0,63	0/1:14,0:11:28.66:45,0,29
chr10	92624821	.	T	TC	2359.04	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-11.699;DP=724;FS=6.451;HRun=4;HaplotypeScore=67.7159;InbreedingCoeff=0.9967;MQ=81.99;MQ0=0;MQRankSum=-1.120;QD=30.24;ReadPosRankSum=1.074;VQSLOD=4.0329;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,153,1711	0/0:9,0:9:18.05:0,18,204	0/0:23,0:23:68.64:0,69,726	0/0:22,0:22:53.88:0,54,547	0/0:29,0:29:87.23:0,87,970	1/1:1,17:18:45.15:614,45,0	1/1:4,22:26:60.20:821,60,0	0/0:32,0:32:81.23:0,81,917	0/0:31,0:31:87.25:0,87,987	0/0:35,0:35:96.27:0,96,1082	0/0:21,0:21:63.18:0,63,715	0/0:21,0:21:60.17:0,60,680	0/0:29,0:29:75.21:0,75,850	0/0:29,0:29:87.25:0,87,986	0/0:27,0:27:81.22:0,81,908	1/1:3,31:34:78.26:1067,78,0	0/0:27,0:27:72.21:0,72,817	0/0:16,0:16:48.14:0,48,544	0/0:22,0:22:63.17:0,63,706	0/0:27,0:27:75.19:0,75,829	0/0:35,0:35:99:0,99,1115	0/0:28,0:28:75.18:0,75,832	0/0:23,0:23:57.14:0,57,630	0/0:28,0:28:75.07:0,75,791	0/0:15,0:15:39.11:0,39,442	0/0:21,0:21:54.13:0,54,594	0/0:33,0:31:96.22:0,96,1053	0/0:9,0:9:27.08:0,27,306
chr10	92626014	.	AT	A	6810.21	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-4.212;DP=656;FS=2.691;HRun=10;HaplotypeScore=99.1810;InbreedingCoeff=0.9834;MQ=70.64;MQ0=0;MQRankSum=2.161;QD=20.15;ReadPosRankSum=3.464;VQSLOD=5.2634;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,129,1408	0/0:11,0:11:27.06:0,27,292	0/0:16,0:16:13.19:0,13,197	0/0:9,0:8:8.96:0,9,75	0/0:5,0:17:37.23:0,37,197	1/1:2,19:21:50.48:426,50,0	1/1:4,20:24:38.97:339,39,0	1/1:6,25:31:71.73:598,72,0	0/0:1,0:16:36.99:0,37,189	1/1:3,27:30:80.98:703,81,0	1/1:0,19:19:56.89:485,57,0	1/1:3,19:22:29.16:372,29,0	1/1:2,25:27:68.95:594,69,0	1/1:0,25:25:62.99:547,63,0	0/0:25,0:25:75.10:0,75,805	1/1:3,23:26:23.54:435,24,0	0/0:25,0:25:69.12:0,69,732	1/1:0,22:22:53.97:465,54,0	0/0:12,0:27:60.29:0,60,332	0/0:7,0:32:72.52:0,73,408	0/0:6,0:28:60.20:0,60,331	1/1:0,17:17:50.76:414,51,0	1/1:5,18:23:38.81:338,39,0	1/1:4,26:30:68.98:599,69,0	1/1:1,20:21:56.99:495,57,0	0/0:9,2:29:11.75:0,12,256	0/0:4,0:17:34.41:0,34,184	0/0:5,0:17:26.16:0,26,162
chr10	92626826	.	ATGTGTGTGTGTGTG	A	2923.83	PASS	AB=0.690;AC=30;AF=0.625;AN=48;BaseQRankSum=6.844;DP=479;FS=1.873;HRun=0;HaplotypeScore=188.3847;InbreedingCoeff=0.6260;MQ=62.80;MQ0=5;MQRankSum=-4.852;QD=11.38;ReadPosRankSum=2.693;VQSLOD=2.8481;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:29:15.05:0,15,485	./.	./.	0/0:23,0:16:6.02:0,6,221	1/1:10,0:12:0.47:2,0,0	0/0:18,0:18:18.06:0,18,849	0/0:28,0:30:30.99:0,31,1681	0/0:27,0:26:24.54:0,25,773	1/1:11,0:14:8.06:163,8,0	1/1:5,2:7:3.01:56,3,0	0/0:8,0:8:0:0,0,0	1/1:14,5:19:2.21:116,2,0	1/1:16,3:20:15.05:445,15,0	1/1:10,6:17:15.52:568,16,0	1/1:6,0:14:14.68:388,15,0	0/0:11,0:11:18.02:0,18,1116	1/1:20,0:27:6.02:196,6,0	1/1:20,2:23:15:414,15,0	1/1:17,0:17:3.01:98,3,0	0/1:6,0:10:0:0,0,0	0/0:35,0:33:1.07:0,1,3	1/1:8,3:11:6.02:124,6,0	0/1:4,4:8:0:0,0,0	1/1:25,4:30:2.96:20,3,0	./.	1/1:8,0:11:6.02:195,6,0	1/1:9,0:16:9.03:293,9,0	./.
chr10	92626988	.	TC	T	6590.32	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=13.717;DP=573;FS=12.576;HRun=8;HaplotypeScore=75.7860;InbreedingCoeff=0.9937;MQ=83.87;MQ0=0;MQRankSum=-2.733;QD=23.21;ReadPosRankSum=3.158;VQSLOD=4.7150;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,32:36:84.13:809,84,0	0/0:7,0:7:18.06:0,18,217	0/0:24,0:24:28.11:0,28,536	0/0:24,0:23:43.30:0,43,483	0/0:9,0:9:27.07:0,27,314	1/1:1,19:20:39.01:367,39,0	1/1:2,17:19:42.06:405,42,0	0/0:24,0:24:60.18:0,60,724	0/0:16,0:16:45.13:0,45,534	1/1:2,23:25:69.10:661,69,0	1/1:2,6:8:12.01:116,12,0	1/1:0,21:21:63.05:598,63,0	1/1:0,18:18:54.09:521,54,0	1/1:1,22:23:63.10:608,63,0	0/0:23,0:23:69.16:0,69,806	1/1:0,18:17:51.08:492,51,0	0/0:30,0:30:87.15:0,87,1003	1/1:0,22:22:60.10:579,60,0	0/0:25,0:25:54.12:0,54,608	0/0:15,0:15:42.13:0,42,503	0/0:31,0:30:78.22:0,78,920	1/1:2,12:14:29.88:274,30,0	1/1:2,9:11:21.02:203,21,0	1/1:4,22:26:51.08:492,51,0	1/1:6,17:23:48.07:463,48,0	0/0:27,0:28:75.10:0,75,884	0/0:19,0:19:57.17:0,57,687	0/0:14,0:14:33.10:0,33,399
chr10	92627264	.	CAGGG	C	2395.79	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.580;DP=615;FS=12.077;HRun=0;HaplotypeScore=101.1934;InbreedingCoeff=0.9935;MQ=86.08;MQ0=0;MQRankSum=-1.893;QD=41.31;ReadPosRankSum=1.199;VQSLOD=3.2543;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,123,3216	0/0:5,0:5:15.05:0,15,396	0/0:28,0:29:75.22:0,75,1817	0/0:23,0:22:52.88:0,53,1315	0/0:20,0:20:54.19:0,54,1425	1/1:1,15:16:39.13:718,39,0	1/1:4,14:18:39.13:717,39,0	0/0:31,0:31:78.27:0,78,2001	0/0:24,0:24:69.24:0,69,1817	0/0:25,0:25:72.25:0,72,1901	0/0:9,0:9:24.08:0,24,633	0/0:17,0:17:51.18:0,51,1330	0/0:24,0:24:60.21:0,60,1578	0/0:27,0:27:75.26:0,75,1979	0/0:29,0:29:69.21:0,69,1765	1/1:2,22:24:60.21:1104,60,0	0/0:28,0:28:84.29:0,84,2212	0/0:20,0:20:54.19:0,54,1388	0/0:25,0:25:60.18:0,60,1450	0/0:12,0:12:36.12:0,36,950	0/0:28,0:28:84.29:0,84,2217	0/0:19,0:19:51.12:0,51,1196	0/0:17,0:17:48.16:0,48,1264	0/0:20,0:20:54.19:0,54,1392	0/0:16,0:15:42.14:0,42,1081	0/0:30,0:30:84.29:0,84,2193	0/0:16,0:16:42.14:0,42,1081	0/0:17,0:17:51.18:0,51,1338
chr10	92628009	.	G	GT	2151.50	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.556;DP=563;FS=4.883;HRun=4;HaplotypeScore=51.7647;InbreedingCoeff=0.9961;MQ=90.30;MQ0=0;MQRankSum=-2.487;QD=35.27;ReadPosRankSum=1.241;VQSLOD=4.1004;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,147,1665	1/1:0,8:8:24.08:328,24,0	0/0:27,0:27:72.15:0,72,781	0/0:17,0:17:38.87:0,39,408	0/0:22,0:22:57.15:0,57,638	0/0:20,0:20:60.15:0,60,668	0/0:18,0:18:48.12:0,48,535	0/0:22,0:22:60.16:0,60,670	0/0:21,0:21:57.15:0,57,638	0/0:23,0:23:63.17:0,63,705	0/0:16,0:16:42.12:0,42,476	0/0:15,0:15:45.11:0,45,501	0/0:21,0:21:60.14:0,60,667	0/0:14,0:14:39.10:0,39,434	1/1:3,22:25:66.22:900,66,0	0/0:25,0:25:72.17:0,72,790	1/1:0,28:28:78.26:1066,78,0	0/0:24,0:24:69.18:0,69,771	0/0:18,0:18:45.12:0,45,503	0/0:12,0:12:30.08:0,30,340	0/0:20,0:20:60.15:0,60,669	0/0:22,0:22:60.17:0,60,680	0/0:16,0:16:45.12:0,45,502	0/0:20,0:20:54.15:0,54,612	0/0:17,0:17:42.12:0,42,476	0/0:21,0:21:57.16:0,57,646	0/0:14,0:14:42.07:0,42,452	0/0:6,0:6:18.01:0,18,190
chr10	92628719	.	C	CA	8125.08	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-7.024;DP=594;FS=0.675;HRun=1;HaplotypeScore=69.1566;InbreedingCoeff=0.9981;MQ=66.10;MQ0=1;MQRankSum=-1.550;QD=37.97;ReadPosRankSum=0.595;VQSLOD=5.2568;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,1282	1/1:0,8:8:24.08:356,24,0	0/0:18,0:14:34.85:0,35,410	0/0:25,0:25:65.98:0,66,791	1/1:1,15:16:45.15:669,45,0	0/0:19,0:19:47.89:0,48,596	0/0:30,0:30:81.05:0,81,1023	0/0:18,0:18:51.16:0,51,658	1/1:8,16:24:54.17:798,54,0	0/0:25,0:25:72.23:0,72,931	0/0:13,0:13:30.10:0,30,387	0/0:16,0:16:45.15:0,45,583	0/0:15,0:15:45.15:0,45,582	0/0:28,0:28:84.27:0,84,1085	1/1:3,17:20:54.10:753,54,0	0/0:21,0:21:56.92:0,57,712	1/1:3,28:31:81.26:1185,81,0	0/0:35,0:35:98.51:0,99,1189	1/1:2,5:7:21.07:305,21,0	1/1:0,9:9:24.08:359,24,0	1/1:3,45:47:99:1644,111,0	0/0:15,0:15:44.92:0,45,542	0/0:18,0:18:51.17:0,51,660	0/0:30,0:30:84.26:0,84,1075	0/0:16,0:16:42.14:0,42,544	1/1:2,18:20:21.29:810,21,0	1/1:0,19:20:52.60:837,53,0	1/1:4,7:11:30.07:410,30,0
chr10	92630060	.	T	TACACCCCGTGCACCCC	26633.59	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-12.089;DP=639;FS=4.348;HRun=0;HaplotypeScore=268.5654;InbreedingCoeff=0.9173;MQ=84.73;MQ0=0;MQRankSum=-15.860;QD=117.85;ReadPosRankSum=2.438;VQSLOD=4.5882;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,153,6368	0/0:14,0:14:39.13:0,39,1769	0/0:20,0:20:51.37:0,51,1920	0/0:25,0:25:55.93:0,56,1993	0/0:20,0:20:60.19:0,60,2438	0/0:21,0:21:63.22:0,63,3004	0/0:34,0:34:99:0,99,4244	0/0:35,0:35:99:0,99,4171	0/0:29,0:29:87.27:0,87,3653	1/1:7,8:25:60.21:3429,60,0	1/1:3,6:17:27.09:1938,27,0	1/1:8,8:24:42.10:2773,42,0	1/1:4,13:24:57.20:4174,57,0	1/1:4,15:22:57.20:4225,57,0	0/0:22,0:22:66.21:0,66,2957	0/0:22,0:21:63.19:0,63,2602	0/0:34,0:34:99:0,102,4142	1/1:3,4:11:21.07:1647,21,0	0/0:18,0:17:54.19:0,54,2240	0/0:15,0:15:45.15:0,45,1776	0/0:25,0:25:72.25:0,72,3175	1/1:2,7:16:27.09:1882,27,0	1/1:2,2:12:11.67:904,12,0	1/1:6,6:14:21.07:1309,21,0	1/1:4,13:30:51.18:3964,51,0	0/1:30,0:31:99:390,0,3896	0/0:14,0:14:42.14:0,42,1735	0/0:14,0:14:42.14:0,42,1862
chr10	92631261	.	CA	C	9691.01	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.584;DP=793;FS=2.693;HRun=2;HaplotypeScore=81.0156;InbreedingCoeff=0.9978;MQ=87.46;MQ0=0;MQRankSum=-2.070;QD=36.16;ReadPosRankSum=3.628;VQSLOD=5.5393;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,178,2613	0/0:11,0:11:33.11:0,33,492	0/0:25,0:25:75.23:0,75,1047	0/0:30,0:30:75.72:0,76,1092	0/0:13,0:13:39.12:0,39,564	0/0:21,0:21:63.21:0,63,941	0/0:23,0:23:69.21:0,69,994	0/0:28,0:28:81.25:0,81,1160	0/0:28,0:28:84.27:0,84,1239	1/1:0,28:28:75.22:947,75,0	1/1:0,24:24:72.19:916,72,0	1/1:0,30:30:84.27:1091,84,0	1/1:0,31:31:74.99:974,75,0	1/1:0,30:30:90.29:1169,90,0	0/0:40,0:40:99:0,120,1796	0/0:36,0:36:99:0,105,1573	0/0:38,0:38:99:0,111,1663	1/1:1,30:31:87.28:1129,87,0	0/0:23,0:23:66.22:0,66,987	0/0:25,0:25:75.24:0,75,1104	0/0:52,0:52:99:0,150,2227	1/1:0,18:18:54.18:701,54,0	1/1:0,20:20:57.19:740,57,0	1/1:1,33:34:90.29:1169,90,0	1/1:0,22:22:66.21:857,66,0	0/0:29,2:31:15.39:0,15,1207	0/0:26,0:26:78.26:0,78,1159	0/0:16,0:16:48.16:0,48,719
chr10	92632896	.	A	AT	7938.85	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-12.666;DP=550;FS=0.695;HRun=9;HaplotypeScore=54.0656;InbreedingCoeff=0.9276;MQ=78.63;MQ0=1;MQRankSum=1.288;QD=26.37;ReadPosRankSum=-0.082;VQSLOD=5.1787;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:69.19:763,69,0	1/1:1,15:16:39.11:431,39,0	0/0:17,0:16:20.44:0,20,142	0/1:16,0:14:15.82:16,0,83	1/1:3,20:23:56.94:591,57,0	0/0:24,0:24:65.98:0,66,570	0/0:13,0:13:29.99:0,30,260	0/0:30,0:30:68.97:0,69,599	1/1:0,12:13:32.92:346,33,0	1/1:1,24:25:72.18:782,72,0	1/1:4,19:23:57.15:630,57,0	0/0:23,0:23:62.98:0,63,547	0/0:22,0:22:56.98:0,57,495	0/0:15,0:15:44.01:0,44,367	1/1:2,16:18:48.13:531,48,0	0/0:16,0:16:44.98:0,45,389	1/1:2,15:17:16.12:405,16,0	0/0:12,0:12:26.96:0,27,229	1/1:2,19:21:56.82:608,57,0	1/1:1,14:15:39:402,39,0	1/1:1,14:15:39.11:431,39,0	0/0:15,0:15:29.96:0,30,257	0/0:19,0:19:47.99:0,48,417	0/0:13,0:13:38.99:0,39,339	0/0:30,0:30:89.98:0,90,781	1/1:4,25:29:75.10:809,75,0	1/1:3,26:29:69.19:763,69,0	1/1:2,13:15:39.11:430,39,0
chr10	92634508	.	CG	C	4908.94	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=12.160;DP=634;FS=5.185;HRun=7;HaplotypeScore=65.7609;InbreedingCoeff=0.9896;MQ=74.50;MQ0=0;MQRankSum=-1.670;QD=25.43;ReadPosRankSum=1.454;VQSLOD=5.6578;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1188	0/0:10,0:10:30.10:0,30,376	0/0:14,0:13:10.17:0,10,352	0/0:12,0:12:21.94:0,22,243	1/1:2,24:26:69.15:703,69,0	0/0:24,0:24:43.18:0,43,765	0/0:33,0:33:84.25:0,84,1030	0/0:13,0:13:21.04:0,21,230	1/1:3,21:24:57.13:581,57,0	1/1:2,17:19:54.12:551,54,0	1/1:3,8:11:21.04:213,21,0	0/0:28,0:28:78.20:0,78,927	0/0:32,0:32:90.22:0,90,1076	0/0:37,0:37:99:0,111,1343	0/0:26,0:26:75.19:0,75,892	0/0:11,0:11:30.10:0,30,377	0/0:42,0:43:99:0,126,1538	0/0:46,0:46:99:0,132,1615	1/1:2,13:15:39.06:387,39,0	1/1:3,9:12:24.05:243,24,0	1/1:0,37:37:96.22:979,96,0	0/0:10,0:10:27.06:0,27,314	0/0:14,0:14:39.11:0,39,473	0/0:32,0:32:84.22:0,84,1025	0/0:22,0:22:60.18:0,60,741	1/1:4,20:24:60.13:611,60,0	1/1:1,17:18:45.10:458,45,0	1/1:0,7:7:18.04:184,18,0
chr10	92634744	.	G	GT	2235.29	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-12.106;DP=819;FS=0.477;HRun=6;HaplotypeScore=99.0501;InbreedingCoeff=0.9996;MQ=90.67;MQ0=0;MQRankSum=-1.920;QD=27.94;ReadPosRankSum=-0.848;VQSLOD=3.1837;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,1353	0/0:13,0:13:27.05:0,27,275	0/0:36,0:36:77.32:0,77,841	0/0:32,0:32:73.82:0,74,700	0/0:23,0:23:66.12:0,66,665	1/1:2,20:22:57.18:717,57,0	1/1:4,27:31:72.23:906,72,0	0/0:45,0:45:99:0,120,1214	0/0:28,0:28:78.11:0,78,772	0/0:38,0:38:99:0,99,1010	0/0:15,0:15:42.09:0,42,428	0/0:27,0:27:72.13:0,72,725	0/0:34,0:34:93.19:0,93,942	0/0:41,0:41:99:0,114,1163	0/0:41,0:41:99:0,120,1217	1/1:1,26:27:60.19:755,60,0	0/0:43,0:43:99:0,114,1156	0/0:16,0:16:45.10:0,45,459	0/0:21,0:21:51.09:0,51,513	0/0:17,0:17:48.11:0,48,489	0/0:28,0:28:72.14:0,72,727	0/0:27,0:27:69.13:0,69,696	0/0:23,0:23:63.14:0,63,642	0/0:31,0:31:93.20:0,93,941	0/0:24,0:24:63.14:0,63,643	0/0:41,0:41:99:0,114,1163	0/0:35,0:35:99:0,102,1031	0/0:14,0:14:42.10:0,42,429
chr10	92635017	.	AGGCG	A	1173.23	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.402;DP=685;FS=0.779;HRun=0;HaplotypeScore=142.7323;InbreedingCoeff=0.9995;MQ=78.49;MQ0=0;MQRankSum=-4.681;QD=51.01;ReadPosRankSum=-4.142;VQSLOD=3.1733;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,160,4312	0/0:16,0:16:42.14:0,42,1127	0/0:12,0:12:33.11:0,33,838	0/0:21,0:21:48:0,48,1245	0/0:30,0:30:84.29:0,84,2306	0/0:22,0:22:63.20:0,63,1657	0/0:38,0:38:99:0,114,3167	1/1:1,22:23:66.21:1268,66,0	0/0:24,0:24:66.23:0,66,1819	0/0:31,0:31:87.29:0,87,2325	0/0:17,0:17:48.13:0,48,1169	0/0:28,0:28:84.29:0,84,2236	0/0:28,0:28:84.26:0,84,2126	0/0:21,0:21:63.22:0,63,1721	0/0:18,0:18:54.19:0,54,1510	0/0:25,0:25:75.25:0,75,1952	0/0:17,0:17:51.18:0,51,1386	0/0:30,0:30:87.30:0,87,2415	0/0:16,0:16:39.13:0,39,1047	0/0:17,0:17:48.11:0,48,1202	0/0:45,0:45:99:0,126,3255	0/0:13,0:13:39.13:0,39,1049	0/0:16,0:16:42.14:0,42,1152	0/0:30,0:30:90.31:0,90,2500	0/0:17,0:16:51.18:0,51,1395	0/0:26,0:26:75.25:0,75,1999	0/0:31,0:31:90.31:0,90,2478	0/0:18,0:18:51.17:0,51,1384
chr10	92635349	.	TTG	T	4567.43	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-2.834;DP=674;FS=30.316;HRun=0;HaplotypeScore=135.8643;InbreedingCoeff=0.9870;MQ=60.82;MQ0=9;MQRankSum=0.848;QD=20.39;ReadPosRankSum=1.848;VQSLOD=3.2052;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:39:80.54:0,81,1130	0/0:12,0:12:20.83:0,21,283	0/0:26,0:24:41.47:0,41,527	0/0:42,0:32:65.68:0,66,891	1/1:20,0:20:35.35:442,35,0	0/0:15,0:15:24.08:0,24,370	0/0:24,0:24:39.12:0,39,573	0/0:29,0:24:54.17:0,54,769	1/1:24,0:24:45.85:551,46,0	1/1:30,1:31:55.85:778,56,0	1/1:21,0:21:40.35:463,40,0	0/0:26,0:25:22.09:0,22,716	0/0:31,0:31:59.11:0,59,755	0/0:14,0:14:32.61:0,33,423	0/0:28,0:28:57.06:0,57,799	0/0:19,0:19:31.90:0,32,360	0/0:32,0:32:68.59:0,69,1026	0/0:13,0:13:33.07:0,33,432	1/1:6,12:18:23.39:370,23,0	1/1:22,0:22:8.72:214,9,0	1/1:23,0:23:35.92:430,36,0	0/0:25,0:25:53.98:0,54,766	0/0:20,0:20:45.10:0,45,633	0/0:29,0:29:38.73:0,39,580	0/0:26,0:26:50.80:0,51,745	1/1:31,0:31:16.75:750,17,0	1/1:22,0:22:33.33:299,33,0	1/1:12,0:10:26.49:271,26,0
chr10	92635362	.	C	CGAGA	4215.60	PASS	AB=0.866;AC=43;AF=0.796;AN=54;BaseQRankSum=1.476;DP=720;FS=6.329;HRun=0;HaplotypeScore=188.3901;InbreedingCoeff=0.0186;MQ=56.03;MQ0=16;MQRankSum=-3.939;QD=6.33;ReadPosRankSum=-0.578;VQSLOD=3.2119;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:38:30.07:0,30,387	0/1:10,3:17:38.88:60,0,39	./.	0/1:32,0:24:0:0,0,0	1/1:21,0:21:6.19:90,6,0	1/1:16,0:16:3.01:55,3,0	0/1:28,0:28:44.22:44,0,81	1/1:29,0:24:13.26:130,13,0	1/1:29,0:28:20.85:360,21,0	0/1:30,0:35:7.25:281,0,7	1/1:24,0:24:8.43:72,8,0	1/1:28,0:27:15.49:237,15,0	1/1:30,0:30:6.49:97,6,0	1/1:14,0:20:6:76,6,0	0/1:16,11:30:50.46:399,0,50	0/1:22,0:22:13.54:153,0,14	0/1:24,15:39:99:409,0,100	1/1:11,0:11:3.01:70,3,0	1/1:24,0:22:12.62:142,13,0	1/1:23,0:22:2.95:25,3,0	0/1:19,0:19:0.33:0,0,0	1/1:34,0:33:14.52:207,15,0	1/1:23,0:23:9.03:153,9,0	0/1:27,9:37:37.90:132,0,38	1/1:27,0:26:8.91:157,9,0	1/1:26,0:27:34.56:432,35,0	1/1:25,0:25:29.30:367,29,0	1/1:16,0:13:10.53:66,11,0
chr10	92635368	.	A	AG	282.56	PASS	AB=0.600;AC=1;AF=0.018;AN=56;BaseQRankSum=-2.165;DP=712;FS=18.373;HRun=1;HaplotypeScore=149.4891;InbreedingCoeff=-0.0197;MQ=54.01;MQ0=18;MQRankSum=1.600;QD=10.47;ReadPosRankSum=-3.496;VQSLOD=-0.2476;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:86.92:0,87,1043	0/0:17,0:17:25.95:0,26,282	0/0:15,0:10:22.91:0,23,227	0/0:31,0:18:30.49:0,30,336	0/0:21,0:21:35.11:0,35,411	0/0:16,0:16:17.50:0,17,245	0/0:31,0:31:38.01:0,38,457	0/1:9,18:22:99:357,0,140	0/0:29,0:28:59.54:0,60,633	0/0:34,0:34:94.93:0,95,1133	0/0:24,0:24:48.11:0,48,584	0/0:27,0:26:46.56:0,47,495	0/0:26,0:26:37.93:0,38,465	0/0:19,0:19:22.19:0,22,299	0/0:28,0:28:40.50:0,40,420	0/0:20,0:20:23.17:0,23,208	0/0:41,0:41:73.86:0,74,801	0/0:12,0:12:28.33:0,28,346	0/0:26,0:24:67.90:0,68,697	0/0:21,0:20:14:0,14,202	0/0:20,0:20:27.07:0,27,346	0/0:34,0:33:55.43:0,55,611	0/0:21,0:21:36.84:0,37,410	0/0:38,0:38:42.07:0,42,489	0/0:27,0:26:44.17:0,44,496	0/0:27,0:27:76.93:0,77,832	0/0:24,0:24:54.36:0,54,607	0/0:15,0:12:28.01:0,28,323
chr10	92635404	.	A	AGAGAGT	4510.27	PASS	AB=0.977;AC=24;AF=0.429;AN=56;BaseQRankSum=10.481;DP=722;FS=12.076;HRun=0;HaplotypeScore=199.5791;InbreedingCoeff=-0.5119;MQ=68.77;MQ0=10;MQRankSum=-9.720;QD=8.01;ReadPosRankSum=-4.158;VQSLOD=2.0803;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:68.99:0,69,917	0/0:15,0:15:15.51:0,16,256	0/0:35,0:22:18.40:0,18,428	0/0:43,0:23:41.82:0,42,449	0/1:19,0:19:75.63:76,0,214	1/1:4,14:21:3.48:44,3,0	0/1:6,22:34:39.28:227,0,39	0/1:36,0:36:27.42:27,0,726	0/1:26,0:26:99:484,0,146	0/1:35,0:35:99:514,0,495	0/1:20,0:20:15.17:15,0,162	0/1:27,0:27:99:118,0,257	0/1:24,0:24:99:319,0,178	0/1:16,0:16:89.16:89,0,124	0/1:24,0:24:99:135,0,260	1/1:12,11:27:4.67:532,5,0	0/1:38,0:37:99:190,0,556	0/1:11,0:11:43.51:44,0,157	0/1:24,0:23:99:119,0,393	0/0:12,0:12:11.81:0,12,89	0/0:24,0:24:38.61:0,39,324	0/1:27,0:27:99:127,0,269	0/1:26,0:26:76.44:76,0,291	0/1:31,0:31:17.10:17,0,259	0/1:26,0:25:87.37:87,0,286	0/1:25,0:24:99:562,0,207	0/1:28,0:27:99:642,0,139	0/1:18,0:16:67.03:67,0,217
chr10	92635631	.	A	AT	1683.35	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.072;DP=624;FS=1.712;HRun=8;HaplotypeScore=77.1781;InbreedingCoeff=0.9697;MQ=74.97;MQ0=0;MQRankSum=0.077;QD=25.90;ReadPosRankSum=1.271;VQSLOD=4.4384;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:70.40:0,70,796	1/1:1,9:10:24.06:268,24,0	0/0:17,0:18:21.04:0,21,273	0/0:19,0:19:36.35:0,36,304	0/0:24,0:24:66.01:0,66,599	0/0:30,0:30:87.05:0,87,796	0/0:19,0:19:54.03:0,54,494	0/0:37,0:37:87.03:0,87,796	0/0:18,0:18:48:0,48,434	0/0:35,0:35:99:0,102,933	0/0:17,0:17:48.03:0,48,439	0/0:29,0:29:75.03:0,75,685	0/0:14,0:14:42.02:0,42,384	0/0:17,0:17:45.02:0,45,412	1/1:2,26:28:63.19:727,63,0	0/0:17,0:17:44.84:0,45,410	1/1:2,25:27:72.21:831,72,0	0/0:13,0:13:32.99:0,33,295	0/0:19,0:19:41.79:0,42,384	0/0:21,0:21:57.03:0,57,521	0/0:24,0:24:57.02:0,57,521	0/0:25,0:25:75.04:0,75,686	0/0:19,0:19:48.01:0,48,439	0/0:21,0:21:56.99:0,57,512	0/0:27,0:27:69.02:0,69,629	0/0:33,0:33:84.02:0,84,762	0/0:16,1:17:7.42:0,7,322	0/0:12,0:12:36.02:0,36,330
chr10	92639829	.	C	CT	12607.46	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-3.815;DP=478;FS=9.691;HRun=2;HaplotypeScore=75.3888;InbreedingCoeff=0.9953;MQ=67.03;MQ0=22;MQRankSum=-3.202;QD=32.41;ReadPosRankSum=2.517;VQSLOD=4.4775;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:17:39.95:568,40,0	0/0:12,0:11:30.07:0,30,372	0/0:16,0:10:27.09:0,27,348	0/0:19,0:16:44.33:0,44,512	1/1:0,24:24:60.16:796,60,0	1/1:3,21:24:63.21:862,63,0	1/1:2,15:17:40.07:533,40,0	1/1:7,16:17:31.23:633,31,0	1/1:1,9:9:24.08:322,24,0	1/1:5,20:24:42.45:730,42,0	1/1:0,23:23:63.21:858,63,0	1/1:1,11:12:30.10:393,30,0	1/1:1,9:9:18.06:245,18,0	1/1:1,10:11:27.09:367,27,0	0/0:17,0:16:45.15:0,45,582	1/1:0,12:11:27.09:375,27,0	0/0:25,0:25:60.10:0,60,738	1/1:4,9:10:27.07:351,27,0	1/1:2,8:9:24.55:327,25,0	1/1:3,24:26:59.92:796,60,0	1/1:3,10:11:27.09:373,27,0	1/1:1,10:11:30.10:409,30,0	1/1:3,11:13:34.66:453,35,0	1/1:0,12:11:27.09:368,27,0	1/1:1,16:17:48.16:656,48,0	1/1:5,18:20:54.18:729,54,0	1/1:1,15:16:45.15:605,45,0	1/1:1,21:22:62.92:857,63,0
chr10	92639906	.	CT	C	587.62	PASS	AB=0.874;AC=24;AF=0.500;AN=48;BaseQRankSum=3.106;DP=148;FS=7.653;HRun=2;HaplotypeScore=29.1258;InbreedingCoeff=0.3822;MQ=23.12;MQ0=44;MQRankSum=-1.726;QD=6.91;ReadPosRankSum=-0.631;VQSLOD=0.1188;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,1:4:5.05:43,5,0	0/0:8,0:8:15.02:0,15,188	0/0:4,0:1:3.01:0,3,42	0/0:5,0:2:6.02:0,6,83	0/0:3,0:2:1.55:0,2,4	0/1:7,1:6:27.57:28,0,59	0/0:3,0:1:3.01:0,3,42	1/1:9,6:6:18.06:226,18,0	1/1:5,1:4:5.21:30,5,0	./.	0/1:2,0:1:0:0,0,0	1/1:1,0:1:3.01:31,3,0	1/1:2,2:3:5.95:53,6,0	1/1:2,1:1:3.01:35,3,0	0/0:10,0:7:21.07:0,21,293	0/0:9,0:5:9:0,9,86	0/0:7,0:5:1.97:0,2,41	0/1:10,2:6:64.83:96,0,65	./.	1/1:8,0:4:9.77:67,10,0	1/1:5,1:1:3.01:38,3,0	./.	0/1:2,1:2:0.01:0,0,0	1/1:4,4:4:5.88:52,6,0	0/0:2,1:2:0:0,0,0	0/0:5,0:1:2.97:0,3,20	1/1:3,0:1:3.01:31,3,0	./.
chr10	92639934	.	C	CT	301	PASS	AB=0.929;AC=16;AF=0.421;AN=38;BaseQRankSum=3.928;DP=131;FS=4.451;HRun=1;HaplotypeScore=47.8929;InbreedingCoeff=0.4682;MQ=22.41;MQ0=33;MQRankSum=-1.762;QD=8.60;ReadPosRankSum=-1.959;VQSLOD=0.3744;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:1,1:2:2.51:0,3,7	0/0:9,0:9:15.04:0,15,177	0/0:23,0:1:3.01:0,3,39	0/0:13,0:2:6.02:0,6,78	1/1:2,0:2:3.01:37,3,0	1/1:3,3:4:9.02:92,9,0	0/1:5,1:2:8.86:9,0,33	./.	0/0:3,0:2:2.04:0,2,6	./.	1/1:1,1:2:5.85:45,6,0	./.	./.	1/1:2,0:1:2.92:17,3,0	0/0:9,0:7:18.04:0,18,198	1/1:6,1:5:11.50:82,12,0	0/0:10,0:8:17.23:0,17,226	0/0:8,0:5:1.92:0,2,52	0/0:1,0:1:3.01:0,3,35	./.	0/1:4,0:2:0:0,0,0	./.	./.	0/0:4,0:2:0.94:0,1,2	./.	./.	1/1:2,2:3:9:103,9,0	1/1:2,0:1:3.01:42,3,0
chr10	92639940	.	C	CT	410.69	PASS	AB=0.958;AC=23;AF=0.548;AN=42;BaseQRankSum=3.427;DP=127;FS=9.050;HRun=0;HaplotypeScore=45.5451;InbreedingCoeff=0.4070;MQ=23.22;MQ0=25;MQRankSum=-2.000;QD=7.21;ReadPosRankSum=-3.186;VQSLOD=1.4144;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:2.51:0,3,7	0/0:8,0:8:12.04:0,12,162	0/0:24,0:1:3.01:0,3,42	0/0:13,0:2:6.02:0,6,84	1/1:1,2:3:3.48:40,3,0	1/1:5,0:5:8:95,8,0	0/1:9,0:4:7:7,0,31	./.	0/0:2,0:1:2.04:0,2,6	1/1:3,0:1:2.98:21,3,0	1/1:2,1:3:7.76:39,8,0	./.	1/1:3,0:2:2.97:20,3,0	1/1:3,1:3:5.97:63,6,0	0/0:2,0:2:6.02:0,6,84	1/1:8,0:6:11.49:67,11,0	0/0:9,0:7:14.23:0,14,197	0/1:6,1:4:23.17:23,0,34	0/0:1,0:1:3.01:0,3,35	1/1:3,0:2:0.89:2,1,0	0/1:1,0:1:0:0,0,0	./.	./.	./.	./.	./.	1/1:5,0:5:13.77:128,14,0	1/1:2,1:1:3.01:43,3,0
chr10	92639965	.	C	CCTT	981.93	PASS	AB=0.938;AC=27;AF=0.540;AN=50;BaseQRankSum=5.819;DP=215;FS=3.553;HRun=0;HaplotypeScore=84.1805;InbreedingCoeff=-0.2642;MQ=31.14;MQ0=22;MQRankSum=-5.638;QD=5.64;ReadPosRankSum=5.414;VQSLOD=1.5930;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:9:13.16:42,0,13	0/0:8,0:8:17.94:0,18,150	./.	./.	0/1:13,0:13:85.71:87,0,86	0/1:15,4:18:27.33:264,0,27	0/1:7,3:6:18.12:61,0,18	0/0:11,0:7:13.36:0,13,69	0/1:7,0:7:8.43:8,0,14	0/1:9,0:7:3.31:28,0,3	0/1:5,1:6:10.99:58,0,11	1/1:2,0:2:2.88:15,3,0	1/1:4,0:3:5.77:30,6,0	0/1:8,0:8:16.71:17,0,32	0/1:6,0:6:12.64:13,0,60	0/1:4,6:9:33.29:160,0,33	0/1:11,0:10:11.14:11,0,122	0/1:7,0:5:4.13:4,0,47	0/1:14,0:8:8.33:20,0,8	1/1:8,0:6:0.68:32,1,0	0/1:6,0:4:16.19:28,0,16	1/1:4,0:4:2.68:11,3,0	0/0:3,0:2:3.79:0,4,18	0/0:1,0:1:0.89:0,1,2	./.	0/1:4,0:3:1.79:2,0,21	1/1:14,0:13:17.64:198,18,0	1/1:3,0:1:3.01:35,3,0
chr10	92639971	.	C	CCTT	2280.15	PASS	AB=0.987;AC=44;AF=0.846;AN=52;BaseQRankSum=2.531;DP=244;FS=0.785;HRun=0;HaplotypeScore=79.4933;InbreedingCoeff=0.0597;MQ=33.57;MQ0=23;MQRankSum=-2.871;QD=10.41;ReadPosRankSum=0.933;VQSLOD=3.1649;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,1:12:42.58:114,0,43	0/0:10,0:10:6.42:0,6,164	./.	./.	1/1:15,0:15:38.48:305,38,0	1/1:18,4:21:50.07:447,50,0	1/1:10,2:8:17.74:137,18,0	0/1:12,0:8:7.09:7,0,47	1/1:7,0:7:15.37:91,15,0	1/1:11,0:9:12.73:75,13,0	1/1:6,0:6:10.33:81,10,0	1/1:2,0:2:5.75:40,6,0	1/1:4,0:3:8.39:42,8,0	0/1:8,0:8:16.89:44,0,17	0/1:6,0:6:9.65:10,0,85	1/1:4,6:9:6.30:225,6,0	0/1:14,0:13:4.26:4,0,158	0/1:8,0:6:3.72:86,0,4	1/1:21,0:14:4.29:101,4,0	1/1:8,0:7:12.19:85,12,0	1/1:6,0:4:8.59:62,9,0	1/1:5,0:5:5.60:38,6,0	1/1:3,0:2:2.50:19,2,0	1/1:2,0:2:2.37:8,2,0	1/1:3,0:2:2.97:20,3,0	1/1:4,0:3:6.81:47,7,0	1/1:14,1:14:22.15:289,22,0	1/1:3,0:1:3.01:32,3,0
chr10	92640280	.	T	TTGTG	8228.40	PASS	AB=0.593;AC=25;AF=0.463;AN=54;BaseQRankSum=-7.025;DP=424;FS=8.122;HRun=0;HaplotypeScore=88.3293;InbreedingCoeff=0.8949;MQ=67.44;MQ0=0;MQRankSum=-5.334;QD=41.56;ReadPosRankSum=2.345;VQSLOD=5.1038;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,7:12:21.07:515,21,0	0/0:6,0:6:15.05:0,15,257	0/0:16,0:16:38.62:0,39,615	0/0:13,0:13:27.08:0,27,434	1/1:1,10:11:30.10:753,30,0	1/1:4,0:17:25.23:130,25,0	1/1:2,0:16:33.68:154,34,0	0/0:32,0:32:69.22:0,69,1135	1/1:2,12:14:32.19:828,32,0	1/1:1,14:17:47.95:1093,48,0	1/1:2,5:7:12.04:301,12,0	0/0:32,0:32:78.23:0,78,1304	0/0:20,0:20:57.20:0,57,978	0/0:24,0:24:62.76:0,63,1005	0/0:19,0:19:42.14:0,42,703	0/1:5,0:16:21.45:94,0,21	0/0:14,0:14:19.26:0,19,374	0/0:9,0:9:21.07:0,21,361	1/1:11,5:16:15.05:345,15,0	1/1:1,1:4:5.81:88,6,0	1/1:3,10:13:21.07:527,21,0	0/0:11,0:11:33.07:0,33,532	0/0:7,0:7:15.05:0,15,257	0/0:13,0:12:30.10:0,30,515	0/0:8,0:8:18.06:0,18,309	1/1:6,24:30:78.27:1897,78,0	1/1:5,20:25:60.21:1504,60,0	./.
chr10	92640333	.	A	AGGAAGATTAAAAGGTATAAGAGG	1712.12	PASS	AB=0.670;AC=18;AF=0.900;AN=20;BaseQRankSum=-2.775;DP=31;FS=11.083;HRun=0;HaplotypeScore=30.1487;InbreedingCoeff=-0.2478;MQ=143.62;MQ0=0;MQRankSum=-2.200;QD=68.48;ReadPosRankSum=-0.765;VQSLOD=0.9159;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,0:1:3.01:52,3,0	0/1:2,1:5:35.23:485,0,35	0/1:3,0:5:13.13:681,0,13	./.	./.	./.	1/1:3,0:3:9.01:107,9,0	./.	./.	./.	1/1:3,0:3:9.03:178,9,0	./.	./.	1/1:2,0:2:3:25,3,0	./.	./.	./.	1/1:1,0:1:2.99:23,3,0	./.	./.	1/1:2,0:2:6.02:152,6,0	./.	1/1:2,0:2:3.01:73,3,0	1/1:1,0:1:2.97:20,3,0	./.	./.	./.
chr10	92642926	.	T	TATC	22096.67	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-13.613;DP=767;FS=33.415;HRun=0;HaplotypeScore=110.7813;InbreedingCoeff=0.9978;MQ=72.82;MQ0=0;MQRankSum=-4.934;QD=58.61;ReadPosRankSum=1.773;VQSLOD=3.4235;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,44:49:99:2998,129,0	0/0:6,0:6:15.04:0,15,234	0/0:20,0:20:57.19:0,57,933	0/0:15,0:15:39.13:0,39,678	1/1:1,30:31:72.25:1698,72,0	1/1:0,15:15:42.14:992,42,0	1/1:2,17:21:51.17:1168,51,0	0/0:35,0:35:99:0,99,1733	1/1:2,26:29:78.27:1808,78,0	1/1:2,28:32:93.29:2085,93,0	1/1:1,17:20:51.18:1203,51,0	0/0:28,0:28:84.24:0,84,1416	0/0:34,0:34:99:0,102,1738	0/0:41,0:41:99:0,120,1996	0/0:33,0:33:99:0,99,1678	1/1:1,24:25:66.23:1559,66,0	0/0:29,0:29:81.25:0,81,1371	0/0:30,0:30:87.24:0,87,1470	1/1:4,21:27:72.19:1532,72,0	1/1:2,26:30:81.28:1877,81,0	1/1:2,32:36:66.23:1552,66,0	0/0:26,0:26:78.23:0,78,1289	0/0:20,0:20:60.19:0,60,997	0/0:39,0:39:99:0,111,1847	0/0:34,0:34:96.33:0,96,1689	1/1:3,19:22:63.21:1442,63,0	1/1:1,19:23:57.20:1332,57,0	1/1:0,15:15:36.12:851,36,0
chr10	92643185	.	AC	A	1931.59	PASS	AB=0.936;AC=47;AF=0.839;AN=56;BaseQRankSum=-1.086;DP=427;FS=3.246;HRun=12;HaplotypeScore=51.8121;InbreedingCoeff=0.2293;MQ=79.44;MQ0=0;MQRankSum=-2.661;QD=5.00;ReadPosRankSum=3.462;VQSLOD=1.2250;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,5:16:2.95:23,3,0	1/1:1,4:5:2.97:23,3,0	0/0:23,0:19:4.92:0,5,109	0/1:13,0:9:6.68:7,0,24	1/1:12,5:17:8.59:69,9,0	0/1:14,2:16:14.23:14,0,46	0/0:17,0:17:12.01:0,12,116	0/1:20,1:21:11.23:11,0,72	1/1:3,5:9:10.94:71,11,0	1/1:13,4:18:10.97:75,11,0	1/1:5,7:12:8.93:70,9,0	1/1:4,8:13:19.94:145,20,0	1/1:9,7:16:8.91:70,9,0	1/1:8,11:20:16.92:122,17,0	1/1:7,8:15:14.90:116,15,0	0/1:7,1:8:17.23:17,0,19	1/1:10,5:16:16.93:122,17,0	1/1:2,6:10:13.97:99,14,0	1/1:8,5:14:14.88:112,15,0	1/1:12,1:13:5.91:46,6,0	1/1:10,8:19:13.94:99,14,0	1/1:10,2:12:8.88:69,9,0	0/1:18,1:19:8.19:8,0,51	1/1:6,15:22:37.87:284,38,0	1/1:8,4:12:5.94:46,6,0	1/1:6,1:8:8.66:51,9,0	1/1:13,7:20:14.88:116,15,0	1/1:7,13:22:26.36:193,26,0
chr10	92646329	.	C	CTT	5427.39	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=7.618;DP=671;FS=4.902;HRun=10;HaplotypeScore=103.6667;InbreedingCoeff=0.9627;MQ=70.75;MQ0=1;MQRankSum=-1.817;QD=15.20;ReadPosRankSum=0.840;VQSLOD=3.4356;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:51:99:0,101,1161	1/1:0,8:8:18.06:268,18,0	0/0:26,0:19:29.70:0,30,277	0/0:21,0:17:14.04:0,14,89	1/1:3,0:22:14.79:118,15,0	1/1:1,15:18:44.12:599,44,0	1/1:6,16:26:52.58:641,53,0	0/0:37,0:37:78.05:0,78,779	1/1:5,0:19:32.32:114,32,0	1/1:3,0:21:12.42:111,12,0	1/1:1,0:20:39.93:140,40,0	0/0:23,0:24:47.65:0,48,592	0/0:23,0:24:59.78:0,60,572	0/0:20,0:20:39.02:0,39,390	1/1:4,14:19:50.64:687,51,0	1/1:3,17:20:45.11:646,45,0	1/1:7,35:46:89.77:1258,90,0	0/0:22,0:22:57.09:0,57,580	1/1:8,1:31:3.05:199,3,0	1/1:2,0:13:22.46:79,22,0	1/1:5,0:18:30.05:106,30,0	0/0:22,0:22:53.27:0,53,493	0/0:10,0:10:21.01:0,21,212	0/0:32,0:33:77.86:0,78,841	0/0:21,0:23:59.50:0,60,550	1/1:5,0:32:66.20:247,66,0	1/1:6,0:31:19.90:137,20,0	1/1:3,0:12:17.97:78,18,0
chr10	92647177	.	AT	A	9448.83	PASS	AB=0.846;AC=54;AF=0.964;AN=56;BaseQRankSum=1.537;DP=345;FS=18.489;HRun=2;HaplotypeScore=177.3792;InbreedingCoeff=-0.0573;MQ=44.53;MQ0=0;MQRankSum=-3.287;QD=27.39;ReadPosRankSum=2.917;VQSLOD=2.7497;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:12.04:155,12,0	1/1:0,8:8:15.05:194,15,0	0/1:5,4:9:32.85:140,0,33	0/1:6,0:4:30.97:34,0,31	1/1:0,20:20:27.08:350,27,0	1/1:0,6:6:18.06:233,18,0	1/1:0,14:14:36.12:467,36,0	1/1:4,24:28:75.23:959,75,0	1/1:0,15:15:45.15:583,45,0	1/1:0,22:22:66.21:852,66,0	1/1:0,16:15:26.79:349,27,0	1/1:0,11:11:27.09:350,27,0	1/1:1,14:14:30.10:389,30,0	1/1:0,12:12:27.09:350,27,0	1/1:1,13:14:27.09:350,27,0	1/1:2,15:17:30.10:389,30,0	1/1:0,4:4:12.04:155,12,0	1/1:0,4:3:9.03:117,9,0	1/1:0,7:7:18.06:234,18,0	1/1:0,16:16:24.08:311,24,0	1/1:0,2:2:3.01:39,3,0	1/1:1,13:14:21.07:272,21,0	1/1:0,20:20:35.96:466,36,0	1/1:0,3:3:3.01:39,3,0	1/1:0,22:22:45.15:583,45,0	1/1:1,18:19:54.18:700,54,0	1/1:0,9:9:18.06:233,18,0	1/1:0,7:7:12.04:156,12,0
chr10	92647187	.	CA	C	9372.56	PASS	AB=0.686;AC=54;AF=0.964;AN=56;BaseQRankSum=-2.142;DP=368;FS=33.030;HRun=2;HaplotypeScore=192.6919;InbreedingCoeff=-0.0554;MQ=48.26;MQ0=0;MQRankSum=-1.134;QD=25.47;ReadPosRankSum=1.508;VQSLOD=1.6648;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:12:11.81:155,12,0	1/1:3,4:7:15.05:192,15,0	0/1:2,6:8:15.47:216,0,15	0/1:6,2:6:32.39:32,0,37	1/1:4,19:23:26.97:349,27,0	1/1:0,8:8:21.07:268,21,0	1/1:1,16:17:36.12:466,36,0	1/1:2,19:21:57.18:739,57,0	1/1:0,18:18:48.16:621,48,0	1/1:3,22:25:68.43:863,68,0	1/1:2,18:19:26.60:349,27,0	1/1:0,11:11:27.09:349,27,0	1/1:0,14:13:30.10:383,30,0	1/1:0,13:13:27.09:350,27,0	1/1:1,13:14:27.09:350,27,0	1/1:1,14:15:30.10:388,30,0	1/1:0,5:5:12.04:155,12,0	1/1:0,5:4:12.04:155,12,0	1/1:2,7:9:18.06:233,18,0	1/1:6,12:18:24.08:311,24,0	1/1:0,3:3:3.01:39,3,0	1/1:3,11:14:21.07:272,21,0	1/1:2,17:19:35.52:465,36,0	1/1:0,3:2:2.98:39,3,0	1/1:6,15:21:45.15:583,45,0	1/1:3,17:20:48.16:622,48,0	1/1:2,8:10:21.07:272,21,0	1/1:1,5:6:12.04:156,12,0
chr10	92647217	.	TA	T	10021.10	PASS	AB=0.718;AC=54;AF=0.964;AN=56;BaseQRankSum=1.538;DP=427;FS=8.807;HRun=2;HaplotypeScore=180.5055;InbreedingCoeff=-0.0547;MQ=48.50;MQ0=0;MQRankSum=-3.356;QD=23.47;ReadPosRankSum=1.672;VQSLOD=3.8149;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:17:32.23:426,32,0	1/1:2,2:4:3.01:39,3,0	0/1:6,7:12:87.63:189,0,88	0/1:8,3:9:72.91:77,0,73	1/1:4,16:20:23.67:309,24,0	1/1:2,4:6:12.04:154,12,0	1/1:2,16:18:29.87:388,30,0	1/1:4,29:33:87.28:1126,87,0	1/1:1,20:21:45.15:583,45,0	1/1:4,15:19:50.46:610,50,0	1/1:4,21:25:48.15:621,48,0	1/1:0,16:16:21.07:272,21,0	1/1:3,12:15:24.08:309,24,0	1/1:1,14:15:27.09:350,27,0	1/1:3,8:11:27.07:336,27,0	1/1:0,9:9:18.06:233,18,0	1/1:0,8:8:15.05:193,15,0	1/1:0,8:8:18.06:233,18,0	1/1:0,13:13:36.12:465,36,0	1/1:8,12:20:36.07:447,36,0	1/1:0,11:11:5.70:77,6,0	1/1:4,12:16:24.08:311,24,0	1/1:11,15:26:33.10:416,33,0	1/1:1,7:7:5.88:58,6,0	1/1:6,16:22:36.12:466,36,0	1/1:5,16:21:33.45:634,33,0	1/1:2,11:13:33.11:426,33,0	1/1:1,6:7:21.07:271,21,0
chr10	92647256	.	CA	C	6297.54	PASS	AB=0.911;AC=53;AF=0.946;AN=56;BaseQRankSum=-2.138;DP=528;FS=12.234;HRun=1;HaplotypeScore=172.3611;InbreedingCoeff=-0.0510;MQ=51.41;MQ0=0;MQRankSum=-2.245;QD=11.93;ReadPosRankSum=5.698;VQSLOD=2.2323;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:29:55.41:333,55,0	1/1:4,0:4:8.76:53,9,0	0/1:13,5:17:55.15:55,0,57	0/1:17,1:16:78.11:78,0,143	1/1:18,0:18:32.05:200,32,0	1/1:13,0:13:32.18:200,32,0	1/1:23,0:23:49.64:306,50,0	0/1:37,0:37:0.01:315,0,0	1/1:22,0:22:47.22:310,47,0	1/1:23,0:23:39.04:285,39,0	1/1:20,0:20:23.41:147,23,0	1/1:15,0:15:41.15:270,41,0	1/1:26,0:26:67.22:430,67,0	1/1:21,0:21:49.82:324,50,0	1/1:18,0:18:32.48:218,32,0	1/1:20,0:20:41.09:261,41,0	1/1:11,0:11:23.40:143,23,0	1/1:19,0:19:49.51:293,50,0	1/1:13,0:13:28.25:150,28,0	1/1:22,0:22:49.27:283,49,0	1/1:20,0:20:35.01:213,35,0	1/1:14,0:14:23.50:149,23,0	1/1:13,0:13:20.53:129,21,0	1/1:13,0:12:23.11:141,23,0	1/1:25,0:25:41.02:261,41,0	1/1:19,0:19:11.96:234,12,0	1/1:25,0:25:58.92:388,59,0	1/1:7,0:7:20.54:127,21,0
chr10	92647259	.	CG	C	7665.26	PASS	AB=0.970;AC=50;AF=0.893;AN=56;BaseQRankSum=4.326;DP=528;FS=0.756;HRun=1;HaplotypeScore=155.8858;InbreedingCoeff=-0.1229;MQ=52.75;MQ0=0;MQRankSum=-4.257;QD=14.52;ReadPosRankSum=8.199;VQSLOD=4.1619;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:31:39.98:381,40,0	0/1:4,0:4:13.09:48,0,13	0/1:17,3:19:85.53:200,0,86	0/1:19,1:17:99:174,0,198	1/1:17,0:17:11.56:205,12,0	1/1:13,0:13:32.73:239,33,0	1/1:22,0:22:33.47:332,33,0	1/1:33,0:33:94.23:581,94,0	1/1:22,0:22:30.60:358,31,0	1/1:22,0:22:43.24:356,43,0	1/1:20,0:20:1.82:158,2,0	1/1:17,0:17:19.73:295,20,0	1/1:26,0:26:69.27:497,69,0	1/1:20,0:20:50.62:376,51,0	1/1:18,0:18:32.78:248,33,0	1/1:21,0:21:25.62:277,26,0	1/1:10,0:10:23.79:175,24,0	1/1:19,0:19:50.47:356,50,0	0/1:17,0:17:57.94:161,0,58	1/1:22,0:22:52.21:351,52,0	1/1:20,0:20:35.64:249,36,0	1/1:13,0:13:23.75:168,24,0	1/1:12,0:12:20.85:162,21,0	0/1:14,0:13:7.83:132,0,8	1/1:25,0:25:4.69:267,5,0	1/1:17,0:17:50.04:327,50,0	1/1:24,0:24:59.64:462,60,0	0/1:8,0:8:1.20:130,0,1
chr10	92648519	.	CTTTTT	C	6714.49	PASS	AB=0.726;AC=48;AF=0.857;AN=56;BaseQRankSum=0.960;DP=555;FS=2.473;HRun=19;HaplotypeScore=113.5659;InbreedingCoeff=0.3259;MQ=61.76;MQ0=1;MQRankSum=-2.635;QD=13.30;ReadPosRankSum=4.922;VQSLOD=0.3340;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,23:42:51.32:712,51,0	1/1:4,0:6:1.17:4,1,0	0/0:30,0:16:30.27:0,30,362	0/0:19,0:9:5.09:0,5,82	1/1:7,12:18:23.16:335,23,0	1/1:4,8:17:31.62:354,32,0	1/1:11,12:24:22.56:288,23,0	1/1:14,5:18:13.73:193,14,0	1/1:7,9:17:22.62:288,23,0	1/1:16,5:22:16.70:237,17,0	1/1:14,5:20:25.99:349,26,0	1/1:7,4:13:2.58:129,3,0	1/1:11,6:18:17.18:235,17,0	1/1:12,5:17:9.90:202,10,0	0/1:7,1:19:5.60:78,0,6	1/1:2,10:13:32.48:407,32,0	0/1:17,1:28:81.19:81,0,84	0/1:11,3:15:65.37:65,0,69	0/1:13,5:17:8.81:231,0,9	1/1:11,10:25:28.87:343,29,0	1/1:6,7:16:17.18:201,17,0	1/1:4,9:15:10.49:190,10,0	1/1:9,6:18:20.15:245,20,0	1/1:10,15:26:25.84:413,26,0	1/1:7,6:15:20.33:266,20,0	1/1:23,11:33:29.79:404,30,0	1/1:11,9:22:25.90:350,26,0	1/1:2,2:5:8.86:112,9,0
chr10	92650960	.	CTA	C	1542.86	PASS	AB=1.000;AC=20;AF=0.370;AN=54;BaseQRankSum=-3.096;DP=411;FS=13.161;HRun=0;HaplotypeScore=78.8305;InbreedingCoeff=0.5828;MQ=75.51;MQ0=2;MQRankSum=-1.440;QD=9.76;ReadPosRankSum=2.660;VQSLOD=2.3847;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:36.25:0,36,277	0/1:2,0:2:11.54:19,0,12	0/0:26,0:18:44.24:0,44,501	0/0:29,0:21:47.93:0,48,478	0/0:15,0:15:34.23:0,34,339	0/0:10,0:8:14.90:0,15,118	0/0:16,0:16:14.94:0,15,273	1/1:19,0:19:54:477,54,0	0/0:16,0:16:33.39:0,33,314	0/0:16,0:16:36.51:0,37,368	0/0:11,0:11:9.71:0,10,77	1/1:11,0:11:21.35:184,21,0	0/1:9,0:9:19.65:76,0,20	1/1:10,0:9:1.04:63,1,0	1/1:9,0:9:8.90:94,9,0	0/0:10,0:10:12.47:0,12,127	1/1:17,0:17:8.13:101,8,0	1/1:3,14:17:18.05:246,18,0	0/0:9,0:8:24.02:0,24,265	0/0:10,0:10:14.58:0,15,163	0/0:29,0:28:43.12:0,43,325	0/1:16,0:16:23.97:76,0,24	1/1:14,0:14:10.31:134,10,0	1/1:18,0:18:5.06:106,5,0	0/1:16,0:16:17.14:156,0,17	0/0:13,0:13:38.99:0,39,433	0/0:18,0:18:40.21:0,40,391	./.
chr10	92650972	.	A	ACA	1613.19	PASS	AB=1.000;AC=39;AF=0.886;AN=44;BaseQRankSum=-3.539;DP=547;FS=0.000;HRun=0;HaplotypeScore=107.7710;InbreedingCoeff=0.2759;MQ=50.20;MQ0=5;MQRankSum=1.356;QD=3.79;ReadPosRankSum=-0.893;VQSLOD=2.0668;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:30:5.99:49,6,0	1/1:5,0:5:2.99:24,3,0	./.	./.	1/1:17,0:17:11.92:132,12,0	./.	1/1:24,0:24:2.72:23,3,0	./.	1/1:25,0:25:13.63:124,14,0	1/1:19,0:19:17.98:190,18,0	0/1:13,0:13:0.26:0,0,0	1/1:18,0:18:6.02:88,6,0	1/1:12,0:12:6.01:68,6,0	1/1:15,4:19:11.69:112,12,0	1/1:16,0:16:8.99:90,9,0	./.	1/1:22,0:22:6.46:51,6,0	0/0:27,0:27:4.28:0,4,72	0/1:14,0:11:0:0,0,0	0/1:13,0:13:0.13:21,0,0	1/1:34,0:33:15.01:170,15,0	1/1:22,0:21:8.97:96,9,0	1/1:21,0:21:2.46:25,2,0	1/1:24,0:24:4.69:29,5,0	1/1:16,0:16:20.72:191,21,0	1/1:28,0:28:20.97:194,21,0	1/1:32,0:32:2.94:27,3,0	./.
chr10	92651266	.	G	GAAGT	17614.97	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-7.900;DP=500;FS=6.237;HRun=0;HaplotypeScore=75.7880;InbreedingCoeff=0.9965;MQ=72.75;MQ0=2;MQRankSum=-4.899;QD=60.33;ReadPosRankSum=1.990;VQSLOD=6.7039;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:28:75.26:1990,75,0	1/1:0,7:7:21.07:559,21,0	0/0:13,0:13:26.63:0,27,490	0/0:17,0:17:44.94:0,45,699	0/0:17,0:17:48.16:0,48,881	1/1:3,24:24:57.20:1519,57,0	1/1:5,10:15:36.12:888,36,0	1/1:11,12:22:51.13:1106,51,0	0/0:18,0:18:51.17:0,51,952	0/0:16,0:16:45.15:0,45,839	0/0:16,0:16:45.15:0,45,839	1/1:0,15:15:36.12:959,36,0	1/1:2,22:25:60.21:1593,60,0	1/1:2,10:12:27.09:719,27,0	1/1:2,24:26:63.22:1678,63,0	1/1:0,15:15:36.12:960,36,0	1/1:6,25:31:78.25:1999,78,0	1/1:4,11:16:36.12:953,36,0	0/0:19,0:19:48.16:0,48,889	0/0:16,0:16:45.14:0,45,808	0/0:15,0:15:45.14:0,45,801	1/1:1,11:13:30.10:798,30,0	1/1:2,9:11:30.10:784,30,0	1/1:3,7:10:15.05:389,15,0	1/1:3,12:14:27.09:720,27,0	0/0:26,0:26:69.23:0,69,1253	0/0:21,0:21:63.22:0,63,1176	0/0:13,0:13:39.13:0,39,728
chr10	92651410	.	C	CT	2214.03	PASS	AB=0.646;AC=26;AF=0.464;AN=56;BaseQRankSum=-6.371;DP=402;FS=1.693;HRun=14;HaplotypeScore=56.3108;InbreedingCoeff=0.4076;MQ=55.21;MQ0=7;MQRankSum=2.362;QD=8.45;ReadPosRankSum=0.319;VQSLOD=2.5662;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:12.81:0,13,169	1/1:4,6:10:9:79,9,0	0/0:9,0:4:2.24:0,2,30	0/0:6,0:4:2.06:0,2,9	1/1:6,17:23:42.13:328,42,0	0/1:6,13:20:12.44:170,0,12	1/1:4,6:11:9.47:80,9,0	0/0:8,0:19:26.42:0,26,77	0/1:4,3:7:13.25:20,0,13	1/1:4,7:11:1.73:139,2,0	1/1:5,10:16:8.56:143,9,0	0/0:4,0:10:11.72:0,12,33	0/0:5,0:15:13.45:0,13,40	0/0:2,0:7:12.22:0,12,35	0/1:6,8:14:5.23:82,0,5	1/1:4,8:13:14.84:120,15,0	1/1:11,8:20:6.12:275,6,0	0/0:2,0:15:27.40:0,27,90	1/1:8,5:11:14.84:119,15,0	0/1:12,13:24:7.44:187,0,7	0/1:4,8:12:8.46:111,0,8	0/0:3,0:5:4.05:0,4,12	0/0:2,0:6:10.64:0,11,32	0/0:2,0:3:2.03:0,2,6	0/0:6,0:15:20:0,20,74	1/1:10,13:23:16.13:262,16,0	0/1:10,9:19:10.29:44,0,10	1/1:4,15:21:2.98:241,3,0
chr10	92652026	.	T	TAA	3720.17	PASS	AB=1.000;AC=31;AF=0.574;AN=54;BaseQRankSum=-7.127;DP=252;FS=2.986;HRun=11;HaplotypeScore=27.3201;InbreedingCoeff=0.8176;MQ=54.92;MQ0=6;MQRankSum=-0.719;QD=22.82;ReadPosRankSum=-0.193;VQSLOD=1.7126;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,9:15:21.07:299,21,0	1/1:0,1:1:3.01:43,3,0	0/0:8,0:4:5.56:0,6,58	0/1:3,0:1:0:0,0,0	0/0:5,0:6:14.76:0,15,128	1/1:3,16:16:30.10:434,30,0	1/1:2,5:9:14.53:166,15,0	1/1:13,12:21:33.11:478,33,0	0/0:8,0:8:21.03:0,21,204	0/0:4,0:4:12.02:0,12,116	0/0:2,0:2:6.01:0,6,58	1/1:1,5:7:15.05:202,15,0	1/1:2,5:7:12.04:174,12,0	1/1:2,4:6:11.93:146,12,0	1/1:1,4:5:12.04:174,12,0	1/1:1,6:7:15.05:217,15,0	1/1:7,19:23:36.12:521,36,0	1/1:6,17:20:36.12:521,36,0	0/0:21,0:18:42.01:0,42,400	0/0:3,0:3:2.96:0,3,29	0/0:6,0:6:17.74:0,18,149	./.	1/1:0,1:2:6.02:83,6,0	1/1:0,1:2:3.01:43,3,0	1/1:0,6:6:15.05:217,15,0	0/0:9,0:9:20.99:0,21,204	0/0:9,0:9:17.97:0,18,175	0/0:12,0:11:23.97:0,24,233
chr10	92652137	.	G	GT	2509.14	PASS	AB=0.838;AC=29;AF=0.518;AN=56;BaseQRankSum=-0.129;DP=331;FS=4.076;HRun=9;HaplotypeScore=46.2054;InbreedingCoeff=0.6911;MQ=80.03;MQ0=7;MQRankSum=-2.550;QD=14.26;ReadPosRankSum=-0.280;VQSLOD=3.1437;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:41.84:0,42,341	1/1:1,2:3:9.02:99,9,0	0/0:36,0:18:29.24:0,29,206	0/1:37,0:18:1.35:1,0,71	0/0:15,0:15:35.98:0,36,312	0/1:9,3:10:13.81:85,0,14	1/1:4,1:5:9.01:92,9,0	1/1:17,16:33:81.01:848,81,0	0/0:5,0:5:11.97:0,12,99	0/0:5,0:5:15:0,15,130	0/0:7,0:7:14.98:0,15,130	1/1:3,3:5:12.01:121,12,0	1/1:1,1:2:6.02:65,6,0	1/1:1,4:5:6.02:66,6,0	1/1:1,1:2:3.01:33,3,0	1/1:1,3:4:9.02:99,9,0	1/1:6,13:20:47.94:498,48,0	0/1:9,6:15:9.02:211,0,9	0/0:19,0:19:50.98:0,51,441	0/0:5,0:5:11.99:0,12,103	0/0:6,0:6:8.99:0,9,78	1/1:0,3:3:9.02:98,9,0	1/1:2,2:3:6.02:66,6,0	1/1:2,11:13:21.06:231,21,0	1/1:1,9:10:9.02:99,9,0	0/0:6,0:6:18:0,18,156	0/0:8,0:7:14.98:0,15,130	0/0:19,0:19:44.98:0,45,389
chr10	92652148	.	C	CT	1457.94	PASS	AB=0.748;AC=29;AF=0.518;AN=56;BaseQRankSum=3.896;DP=346;FS=2.827;HRun=11;HaplotypeScore=49.7485;InbreedingCoeff=0.5007;MQ=75.97;MQ0=11;MQRankSum=-1.493;QD=8.10;ReadPosRankSum=-1.237;VQSLOD=1.5980;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,1:24:25.85:151,26,0	1/1:1,0:4:5.83:39,6,0	0/0:34,0:15:7.70:0,8,34	0/0:33,0:16:4.80:0,5,55	0/0:17,0:17:20.76:0,21,157	1/1:7,0:9:0.94:2,1,0	1/1:1,0:3:5.77:31,6,0	0/1:22,10:32:3.69:298,0,4	0/0:5,0:6:16.98:0,17,122	0/0:5,0:5:11.94:0,12,90	0/1:9,1:9:8.38:8,0,118	0/1:2,3:4:3.59:74,0,4	1/1:2,1:3:6:55,6,0	1/1:3,1:4:9.01:85,9,0	1/1:1,1:2:3.01:30,3,0	1/1:7,0:8:7.54:33,8,0	1/1:8,1:22:16.42:156,16,0	1/1:1,15:18:27.05:273,27,0	0/0:19,0:20:2.65:0,3,168	0/0:4,0:4:5.97:0,6,46	0/0:4,0:6:8:0,8,52	1/1:1,2:3:6.01:61,6,0	0/1:1,3:4:5.76:25,0,6	1/1:5,8:13:27.05:272,27,0	0/1:9,1:10:9.54:53,0,10	0/0:6,0:6:11.93:0,12,93	0/0:9,0:8:14.92:0,15,116	0/0:18,0:21:35.83:0,36,281
chr10	92652436	.	G	GGTGTGTGTGT	6422.76	PASS	AB=0.716;AC=40;AF=0.870;AN=46;BaseQRankSum=-2.656;DP=420;FS=0.000;HRun=0;HaplotypeScore=144.9400;InbreedingCoeff=0.0762;MQ=59.81;MQ0=6;MQRankSum=-0.342;QD=18.51;ReadPosRankSum=2.471;VQSLOD=3.8776;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:31:3.76:178,4,0	./.	./.	0/0:25,0:10:1.25:0,1,3	0/0:4,1:6:0.47:0,0,1	0/1:15,5:24:8.91:713,0,9	1/1:27,0:27:12.04:298,12,0	1/1:30,0:30:15.01:344,15,0	1/1:5,4:10:6.02:233,6,0	1/1:6,0:9:12.03:289,12,0	1/1:8,0:8:2.66:24,3,0	1/1:13,0:13:9.03:308,9,0	1/1:12,0:14:15.05:552,15,0	1/1:11,0:11:17.71:612,18,0	1/1:18,0:17:7.96:212,8,0	1/1:10,4:15:17.67:700,18,0	1/1:22,0:20:9.03:307,9,0	1/1:10,0:9:2.97:20,3,0	1/1:19,3:21:21.07:568,21,0	1/1:3,0:3:3.01:75,3,0	0/1:18,0:30:15.65:65,0,16	./.	1/1:3,0:3:2.62:58,3,0	1/1:14,0:17:2.17:129,2,0	./.	1/1:13,0:13:21.06:590,21,0	1/1:6,3:8:3.01:149,3,0	./.
chr10	92652950	.	T	TA	1619.43	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-0.225;DP=377;FS=13.861;HRun=9;HaplotypeScore=61.7997;InbreedingCoeff=0.8044;MQ=66.56;MQ0=0;MQRankSum=-0.703;QD=24.91;ReadPosRankSum=1.309;VQSLOD=3.3405;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:45.12:494,45,0	1/1:1,5:6:15.04:166,15,0	0/1:4,0:4:2.84:3,0,36	0/0:10,0:9:0.87:0,1,111	0/0:19,0:19:47.56:0,48,411	0/0:20,0:20:48.13:0,48,402	0/0:6,0:6:17.99:0,18,155	0/0:19,0:19:44.86:0,45,373	0/0:14,0:14:35.99:0,36,313	0/0:22,0:22:59.97:0,60,519	0/0:15,0:15:38.98:0,39,337	0/0:13,0:13:32.83:0,33,274	0/0:6,0:6:15:0,15,130	0/0:15,0:15:41.91:0,42,355	1/1:2,15:17:48.09:518,48,0	0/0:9,0:9:23.99:0,24,208	1/1:1,19:20:54.15:597,54,0	0/0:9,0:10:25.81:0,26,213	0/0:14,0:15:26.02:0,26,214	0/0:12,0:12:29.99:0,30,260	0/0:8,0:8:24:0,24,208	0/0:7,0:7:21:0,21,182	0/0:14,0:14:41.99:0,42,365	0/0:1,0:1:3:0,3,26	0/0:13,0:13:38.99:0,39,339	0/0:19,0:19:47.97:0,48,414	0/0:23,0:23:59.96:0,60,516	0/0:22,0:22:50.97:0,51,442
chr10	92654937	.	T	TA	2971.61	PASS	AB=0.763;AC=30;AF=0.536;AN=56;BaseQRankSum=3.442;DP=671;FS=4.418;HRun=13;HaplotypeScore=81.7829;InbreedingCoeff=0.7671;MQ=73.01;MQ0=1;MQRankSum=-1.749;QD=8.84;ReadPosRankSum=1.444;VQSLOD=3.1587;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,4:22:23.76:153,24,0	1/1:4,0:15:31.67:184,32,0	0/1:39,2:25:22.83:48,0,23	0/0:16,0:9:8.76:0,9,49	0/0:23,2:25:19.71:0,20,281	1/1:7,1:24:33.13:179,33,0	1/1:4,0:13:32.20:163,32,0	0/0:37,1:38:9.58:0,10,324	0/0:28,0:30:67.26:0,67,448	0/0:26,0:27:46.46:0,46,308	0/0:26,0:28:69.35:0,69,455	1/1:1,10:11:21.02:195,21,0	1/1:6,15:22:1.43:269,1,0	1/1:5,9:14:17.94:156,18,0	1/1:7,1:32:42.92:234,43,0	1/1:4,0:15:2.41:83,2,0	1/1:3,2:20:31.57:185,32,0	1/1:5,21:26:10.75:368,11,0	0/0:28,0:28:51.95:0,52,347	0/0:37,1:41:35.99:0,36,395	0/0:18,1:20:15.65:0,16,238	1/1:4,9:14:20.85:178,21,0	1/1:4,13:17:9.91:231,10,0	0/1:4,10:16:17.41:213,0,17	1/1:9,23:33:16.78:347,17,0	0/0:26,0:26:54.76:0,55,352	0/0:26,1:28:42.92:0,43,431	0/0:25,1:26:20.07:0,20,302
chr10	92655474	.	ACCAAG	A	5356.90	PASS	AB=1.000;AC=41;AF=0.759;AN=54;BaseQRankSum=-9.188;DP=613;FS=10.479;HRun=0;HaplotypeScore=131.2488;InbreedingCoeff=0.5648;MQ=65.44;MQ0=58;MQRankSum=3.124;QD=12.29;ReadPosRankSum=2.445;VQSLOD=3.8255;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:15.11:0,15,316	0/0:10,0:9:14.73:0,15,216	0/1:40,0:10:4.76:5,0,20	0/0:77,0:29:2.10:0,2,83	1/1:8,0:7:7.23:134,7,0	1/1:16,0:12:9.87:217,10,0	1/1:14,0:14:22.36:184,22,0	1/1:17,0:14:5.99:51,6,0	1/1:17,0:16:3.87:69,4,0	1/1:21,0:20:34.99:516,35,0	1/1:10,0:10:12.36:215,12,0	1/1:13,0:13:21.05:300,21,0	1/1:15,0:15:26.98:411,27,0	1/1:13,0:13:15.05:266,15,0	0/0:27,0:25:35.43:0,35,448	1/1:22,0:21:3.75:46,4,0	0/0:26,0:24:17.45:0,17,423	1/1:23,0:23:42.47:565,42,0	1/1:20,0:11:9.02:131,9,0	1/1:20,0:17:10.65:210,11,0	0/1:24,0:22:24.34:259,0,24	1/1:6,9:15:19.71:169,20,0	1/1:15,10:25:11.89:112,12,0	1/1:8,16:24:3.01:34,3,0	1/1:12,0:11:27.07:399,27,0	0/1:31,0:29:1.65:477,0,2	1/1:34,0:34:35.21:587,35,0	./.
chr10	92657449	.	C	CT	843.56	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-4.847;DP=375;FS=0.000;HRun=7;HaplotypeScore=67.4641;InbreedingCoeff=0.7489;MQ=29.67;MQ0=64;MQRankSum=0.467;QD=6.91;ReadPosRankSum=-1.910;VQSLOD=-0.1866;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:21:45.07:0,45,432	0/1:3,0:3:0:0,0,0	0/1:4,0:1:0:0,0,0	0/1:4,0:1:0:0,0,0	0/0:17,0:17:30.04:0,30,286	0/0:11,0:9:8.96:0,9,77	0/0:17,0:14:36.06:0,36,346	1/1:15,11:24:30.04:334,30,0	0/0:8,0:8:18.03:0,18,174	0/0:16,0:14:30.04:0,30,289	0/0:13,0:11:24.04:0,24,231	1/1:6,5:8:15.05:181,15,0	1/1:5,4:8:9.50:109,9,0	1/1:5,2:4:6.02:73,6,0	0/0:12,0:12:30.02:0,30,289	0/0:7,0:4:9.01:0,9,84	0/0:21,0:15:17.54:0,18,167	1/1:20,0:14:7.11:51,7,0	0/0:26,0:23:23.91:0,24,231	0/0:8,0:6:5.79:0,6,57	0/0:14,0:11:2.99:0,3,29	1/1:5,1:3:2.98:21,3,0	1/1:6,1:5:3.01:36,3,0	1/1:6,7:11:11.83:144,12,0	1/1:9,3:8:6.49:73,6,0	0/0:22,0:20:39.03:0,39,369	0/0:17,0:13:21.03:0,21,202	0/0:16,0:8:15:0,15,139
chr10	92659894	.	G	GA	1318.53	PASS	AB=0.838;AC=7;AF=0.125;AN=56;BaseQRankSum=0.080;DP=557;FS=23.688;HRun=10;HaplotypeScore=100.5834;InbreedingCoeff=0.5116;MQ=81.62;MQ0=2;MQRankSum=-1.353;QD=9.77;ReadPosRankSum=-1.471;VQSLOD=0.5565;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:56.46:0,56,466	0/1:2,6:8:6.58:142,0,7	0/1:36,0:29:13.48:13,0,165	0/1:29,0:19:37.85:38,0,46	0/0:18,0:18:50.63:0,51,411	0/0:16,0:16:35.87:0,36,291	0/0:12,0:12:24.44:0,24,198	0/0:27,0:27:62.87:0,63,513	0/0:15,0:15:35.93:0,36,292	0/0:21,0:21:53.85:0,54,445	0/0:18,0:19:49.97:0,50,405	0/0:8,0:9:26:0,26,201	0/0:18,0:19:46.97:0,47,375	0/0:20,0:20:53.91:0,54,441	1/1:3,21:25:50.96:524,51,0	0/0:22,0:22:41.93:0,42,340	1/1:4,29:33:50.55:743,51,0	0/0:16,0:16:38.94:0,39,319	0/0:24,1:25:18.53:0,19,350	0/0:27,1:28:33.67:0,34,487	0/0:3,0:3:2.99:0,3,25	0/0:14,0:14:38.74:0,39,309	0/0:15,0:15:41.94:0,42,345	0/0:10,0:10:26.97:0,27,222	0/0:28,1:29:43.91:0,44,560	0/0:21,0:21:50.78:0,51,415	0/0:22,0:21:32.85:0,33,270	0/0:5,0:5:11.99:0,12,99
chr10	92659934	.	T	TTTTC	4691.25	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=-0.721;DP=585;FS=4.024;HRun=0;HaplotypeScore=147.3942;InbreedingCoeff=0.3774;MQ=66.19;MQ0=8;MQRankSum=-6.533;QD=17.37;ReadPosRankSum=-0.167;VQSLOD=4.5264;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,30:40:48.63:1095,49,0	0/0:10,0:10:27.56:0,28,417	0/0:49,0:19:12.03:0,12,164	0/0:48,0:21:2.74:0,3,77	0/1:18,0:18:51.89:139,0,52	1/1:4,13:18:24.08:589,24,0	1/1:3,11:14:21.06:518,21,0	0/0:20,0:20:23.73:0,24,292	0/1:17,0:17:49.26:249,0,49	0/1:24,0:24:18.15:258,0,18	1/1:18,0:18:16.48:208,16,0	0/0:11,0:11:32.76:0,33,422	0/0:15,0:15:39.12:0,39,592	0/0:18,0:18:43.86:0,44,521	0/0:18,0:18:43.63:0,44,554	1/1:6,11:17:15.05:368,15,0	0/0:31,0:32:32.08:0,32,862	0/0:20,0:20:50.43:0,50,659	0/1:25,0:25:99:199,0,141	0/1:26,0:26:76.72:231,0,77	0/1:4,0:4:32.35:32,0,61	0/0:14,0:14:38.83:0,39,509	0/0:17,0:17:47.32:0,47,623	0/0:16,0:16:42.13:0,42,653	0/0:27,0:27:62.81:0,63,896	0/1:22,0:22:59.87:282,0,60	0/1:22,0:21:1.82:334,0,2	1/1:5,0:5:12.04:187,12,0
chr10	92659942	.	C	CTTTCT	7901.84	PASS	AB=0.984;AC=26;AF=0.464;AN=56;BaseQRankSum=-10.480;DP=572;FS=4.175;HRun=0;HaplotypeScore=148.6801;InbreedingCoeff=0.6875;MQ=65.62;MQ0=7;MQRankSum=-6.006;QD=25.66;ReadPosRankSum=1.061;VQSLOD=4.7605;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:41:40.78:465,0,41	0/0:11,0:11:27.97:0,28,368	0/0:46,0:17:14.43:0,14,198	0/1:46,0:20:9.59:10,0,119	1/1:7,9:17:27.09:518,27,0	0/1:20,0:20:36.85:272,0,37	1/1:14,0:14:24.08:305,24,0	0/0:20,0:20:34.67:0,35,391	1/1:7,6:15:24.08:599,24,0	1/1:6,13:22:57.10:1028,57,0	1/1:6,8:17:21.07:502,21,0	0/0:11,0:11:26.32:0,26,338	0/0:15,0:15:38.80:0,39,503	0/0:16,0:16:21.68:0,22,368	0/0:19,0:19:42.07:0,42,475	0/1:14,0:15:17.52:174,0,18	0/0:31,0:31:63.80:0,64,901	0/0:22,0:22:50.94:0,51,613	1/1:15,13:28:45.98:870,46,0	1/1:11,11:23:51.17:934,51,0	1/1:3,0:4:3.01:83,3,0	0/0:14,0:14:32.48:0,32,426	0/0:19,0:19:44.15:0,44,535	0/0:17,0:17:48.15:0,48,625	0/0:23,0:23:50.48:0,50,657	1/1:7,13:21:57.17:1054,57,0	1/1:5,14:19:26.79:736,27,0	1/1:1,4:5:12.04:355,12,0
chr10	92659951	.	C	CT	1838.82	PASS	AB=0.978;AC=13;AF=0.232;AN=56;BaseQRankSum=0.590;DP=547;FS=10.963;HRun=4;HaplotypeScore=133.1308;InbreedingCoeff=0.1323;MQ=62.55;MQ0=7;MQRankSum=-5.262;QD=9.15;ReadPosRankSum=0.706;VQSLOD=0.4092;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:59.49:0,59,552	0/0:11,0:11:30.08:0,30,346	0/0:34,1:11:12.24:0,12,218	0/1:43,2:21:15.74:16,0,223	0/1:14,0:14:8.23:199,0,8	0/0:19,0:19:29.88:0,30,276	0/0:11,0:11:26.63:0,27,226	0/0:22,0:22:52.95:0,53,591	0/1:11,0:11:1.71:81,0,2	0/1:21,0:21:39.41:367,0,39	0/1:15,0:15:99:110,0,108	0/0:12,0:12:36.10:0,36,417	0/0:19,0:19:54.15:0,54,635	0/0:16,0:16:45.10:0,45,498	0/0:19,0:19:50.43:0,50,557	0/0:13,0:13:18.04:0,18,195	0/0:31,0:31:81.63:0,82,928	0/0:23,0:23:66.18:0,66,766	0/1:23,0:23:35.07:350,0,35	0/1:21,2:24:25.09:337,0,25	1/1:4,0:4:2.04:6,2,0	0/0:16,0:16:45.13:0,45,525	0/0:20,0:20:51.04:0,51,573	0/0:19,0:19:54.16:0,54,647	0/0:27,0:27:68.68:0,69,778	0/1:20,0:20:5.76:333,0,6	0/1:19,1:19:35.56:149,0,36	1/1:4,0:4:10.71:45,11,0
chr10	92659960	.	TC	T	4745.73	PASS	AB=0.957;AC=47;AF=0.839;AN=56;BaseQRankSum=-7.866;DP=534;FS=0.000;HRun=1;HaplotypeScore=123.6652;InbreedingCoeff=0.3593;MQ=64.46;MQ0=7;MQRankSum=2.585;QD=10.29;ReadPosRankSum=-3.085;VQSLOD=1.4906;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,3:34:26:278,26,0	1/1:11,1:12:23.01:168,23,0	0/0:32,0:11:29.10:0,29,294	0/0:41,0:21:31.62:0,32,355	1/1:16,0:16:11.58:89,12,0	1/1:17,2:19:14.76:144,15,0	0/1:11,0:11:4.10:4,0,25	1/1:21,0:21:50.80:282,51,0	0/1:13,0:13:24.15:38,0,24	1/1:14,3:17:19.59:203,20,0	0/1:13,3:16:2.21:120,0,2	1/1:12,0:12:25.77:163,26,0	1/1:22,0:22:56.97:289,57,0	1/1:14,0:14:37.44:203,37,0	1/1:19,0:19:48.30:263,48,0	1/1:13,0:13:3.91:24,4,0	1/1:33,0:33:67.21:344,67,0	1/1:24,0:24:63.74:308,64,0	1/1:16,1:17:6.43:64,6,0	1/1:18,2:20:20.07:182,20,0	1/1:4,0:4:2.34:30,2,0	1/1:15,2:17:39.29:281,39,0	1/1:17,0:17:45.29:259,45,0	1/1:19,0:19:52.96:259,53,0	1/1:26,1:27:77.83:455,78,0	1/1:19,2:21:20.07:213,20,0	0/1:15,1:15:9.61:55,0,10	0/1:7,0:7:10.67:28,0,11
chr10	92661503	.	C	CAT	2246.01	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.430;DP=839;FS=5.937;HRun=0;HaplotypeScore=98.7443;InbreedingCoeff=0.9989;MQ=72.42;MQ0=1;MQRankSum=-1.274;QD=37.43;ReadPosRankSum=3.161;VQSLOD=5.8160;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,57:59:95.32:2341,95,0	0/0:14,0:14:42.07:0,42,602	0/0:22,0:17:28.31:0,28,254	0/0:20,0:18:39.80:0,40,440	0/0:27,0:27:81.18:0,81,1202	0/0:24,0:24:72.19:0,72,1087	0/0:33,0:33:99:0,99,1415	0/0:31,0:31:87.10:0,87,1166	0/0:26,0:26:78.17:0,78,1181	0/0:33,0:33:90.08:0,90,1287	0/0:23,0:23:66.16:0,66,1016	0/0:31,0:31:93.16:0,93,1412	0/0:28,0:28:76.37:0,76,1160	0/0:49,0:49:99:0,144,2263	0/0:27,0:27:78.16:0,78,1181	0/0:28,0:28:81.19:0,81,1229	0/0:38,0:38:99:0,114,1732	0/0:32,0:32:96.21:0,96,1469	0/0:22,0:22:63.02:0,63,905	0/0:35,0:35:99:0,102,1477	0/0:40,0:40:99:0,117,1594	0/0:29,0:29:81.22:0,81,1258	0/0:36,0:36:99:0,108,1604	0/0:45,0:45:99:0,129,1848	0/0:26,0:26:78.22:0,78,1184	0/0:28,0:28:78.07:0,78,1101	0/0:21,0:21:60.18:0,60,907	0/0:11,0:11:33.03:0,33,424
chr10	92662693	.	CTCTCTCTG	C	2190.52	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-6.798;DP=763;FS=9.686;HRun=0;HaplotypeScore=269.0865;InbreedingCoeff=-0.2636;MQ=56.04;MQ0=21;MQRankSum=-4.353;QD=4.88;ReadPosRankSum=-9.263;VQSLOD=-0.5382;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:9,24:31:6.70:213,7,0	0/1:13,0:13:53.22:53,0,125	0/0:42,0:17:8.82:0,9,100	0/0:62,0:24:1.70:0,2,10	0/0:22,0:22:14.91:0,15,456	0/0:24,0:21:33.29:0,33,1130	0/0:12,0:11:12.04:0,12,293	0/1:48,0:44:34.05:607,0,34	0/0:32,0:31:13.23:0,13,1277	0/1:27,0:26:99:185,0,656	0/1:18,0:17:99:196,0,244	0/1:35,0:34:40.29:40,0,289	0/1:31,0:28:99:112,0,167	0/1:36,0:34:99:151,0,247	0/1:22,0:21:50.24:50,0,167	0/0:21,0:20:39:0,39,1029	0/1:26,0:24:10.81:11,0,202	1/1:9,0:8:12.56:178,13,0	0/1:24,0:21:99:163,0,277	0/0:24,0:24:11.74:0,12,1129	0/0:42,0:40:35.44:0,35,950	0/1:32,0:28:38.90:39,0,43	0/1:21,0:20:35.84:36,0,68	0/0:15,0:14:6.02:0,6,101	0/0:18,0:18:7.73:0,8,139	0/1:39,0:39:99:200,0,1339	0/1:26,0:24:24.49:24,0,953	0/1:9,0:8:94.23:94,0,245
chr10	92662701	.	G	GTC	15287.84	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.183;DP=739;FS=3.232;HRun=0;HaplotypeScore=193.1893;InbreedingCoeff=0.7115;MQ=52.29;MQ0=19;MQRankSum=4.059;QD=22.78;ReadPosRankSum=4.711;VQSLOD=4.9878;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,1:34:8.66:102,9,0	1/1:10,5:15:22.65:357,23,0	0/0:22,0:5:8.81:0,9,82	0/0:45,0:16:1.55:0,2,10	1/1:7,18:24:15.04:260,15,0	1/1:5,20:22:42.14:727,42,0	1/1:6,7:12:12.02:207,12,0	1/1:25,16:36:83.10:1154,83,0	1/1:8,23:30:50.54:918,51,0	1/1:3,23:26:65.59:1087,66,0	1/1:9,9:17:33.11:552,33,0	1/1:26,11:36:49.84:577,50,0	1/1:17,11:25:46.73:716,47,0	1/1:20,17:35:45.25:800,45,0	1/1:17,9:24:33.01:565,33,0	1/1:3,18:20:36.59:625,37,0	1/1:15,9:21:28.83:456,29,0	1/1:8,1:9:10.13:238,10,0	1/1:11,14:22:45.01:579,45,0	1/1:7,20:26:45.13:779,45,0	1/1:7,34:38:38.33:820,38,0	1/1:19,12:27:24.01:410,24,0	1/1:15,11:25:14.91:183,15,0	1/1:6,10:15:5.99:104,6,0	1/1:9,10:19:24:393,24,0	1/1:4,33:38:93.26:1514,93,0	1/1:3,22:22:45.15:759,45,0	1/1:3,6:8:24.08:404,24,0
chr10	92662717	.	CTG	C	374.59	PASS	AB=0.891;AC=10;AF=0.179;AN=56;BaseQRankSum=4.668;DP=675;FS=7.910;HRun=0;HaplotypeScore=264.8105;InbreedingCoeff=-0.2050;MQ=44.53;MQ0=18;MQRankSum=-8.208;QD=1.51;ReadPosRankSum=-7.305;VQSLOD=-0.2211;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:31:3.66:4,0,34	0/1:10,6:15:99:102,0,102	0/0:11,0:5:2.05:0,2,63	0/1:21,3:7:22.08:22,0,50	0/0:22,0:21:12.60:0,13,302	0/0:20,0:18:42.01:0,42,766	0/0:15,0:13:12.04:0,12,231	0/1:35,2:31:99:255,0,194	0/0:28,0:26:56.36:0,56,1038	0/0:28,0:26:64.55:0,65,1110	0/0:20,0:19:12.81:0,13,337	0/1:34,1:34:35.55:36,0,206	0/1:18,4:19:13.99:14,0,196	0/0:28,6:32:7.90:0,8,285	0/0:24,2:24:23.79:0,24,250	0/0:20,0:19:41.96:0,42,724	0/1:23,2:21:4.44:4,0,250	0/1:8,1:8:14.13:54,0,14	0/0:21,0:17:36.70:0,37,609	0/0:30,0:29:40.89:0,41,912	0/0:38,0:34:44.85:0,45,793	0/0:25,2:23:17.43:0,17,123	0/1:22,4:25:14.08:14,0,58	0/0:15,1:15:5.99:0,6,99	0/1:16,4:20:1.12:1,0,122	0/0:35,0:35:93.03:0,93,1543	0/0:28,0:25:50.56:0,51,950	0/0:8,0:7:17.18:0,17,219
chr10	92662719	.	G	GTCTCTGTC	5753.68	PASS	AB=0.983;AC=25;AF=0.446;AN=56;BaseQRankSum=-2.065;DP=681;FS=2.067;HRun=0;HaplotypeScore=301.3518;InbreedingCoeff=0.6931;MQ=43.35;MQ0=17;MQRankSum=-6.298;QD=15.34;ReadPosRankSum=-3.558;VQSLOD=2.9661;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:31:1.42:1,0,110	1/1:16,0:15:20.11:333,20,0	0/0:11,0:4:8.82:0,9,121	0/0:20,0:6:2.66:0,3,92	0/0:22,0:21:17.78:0,18,408	0/0:20,0:18:39.12:0,39,859	0/0:15,0:13:11.96:0,12,124	1/1:38,0:32:68.93:932,69,0	0/0:30,0:28:56.98:0,57,1158	0/0:24,0:22:54.13:0,54,1036	0/0:21,0:20:14.80:0,15,347	1/1:33,2:34:40.89:625,41,0	1/1:22,2:21:39.06:774,39,0	1/1:29,5:32:38.59:771,39,0	1/1:21,4:23:19.89:621,20,0	0/0:20,0:19:41.11:0,41,926	1/1:25,0:22:2.22:242,2,0	0/1:10,0:9:11.23:178,0,11	0/0:22,0:19:35.93:0,36,567	0/0:30,0:29:47.01:0,47,1155	0/1:36,0:34:82.13:82,0,886	1/1:24,5:25:17.39:645,17,0	1/1:26,1:26:5.26:121,5,0	1/1:18,0:17:2.82:49,3,0	1/1:18,3:21:14.07:379,14,0	0/0:36,0:36:78.26:0,78,1812	0/0:28,0:25:47.73:0,48,993	0/0:7,0:6:9.03:0,9,206
chr10	92662765	.	GTCTC	G	2516.71	PASS	AB=0.791;AC=19;AF=0.339;AN=56;BaseQRankSum=-7.125;DP=630;FS=8.818;HRun=0;HaplotypeScore=284.7802;InbreedingCoeff=0.2850;MQ=35.08;MQ0=25;MQRankSum=1.609;QD=9.39;ReadPosRankSum=0.750;VQSLOD=1.5106;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:23:2.04:6,2,0	0/1:12,0:10:1.25:1,0,20	0/0:28,0:8:15.02:0,15,250	0/0:34,0:6:9.24:0,9,229	0/0:19,0:22:8.97:0,9,40	0/0:14,0:11:7.88:0,8,54	0/0:17,0:14:2.90:0,3,16	1/1:13,31:39:63.86:1153,64,0	0/0:16,0:22:25.96:0,26,100	0/0:22,0:24:44.64:0,45,523	0/0:22,0:22:7.51:0,8,19	0/1:8,18:25:77.10:210,0,77	0/1:10,10:17:22.71:396,0,23	0/1:11,12:22:50.68:55,0,51	0/0:17,0:18:2.80:0,3,13	0/1:20,0:20:77:117,0,77	0/0:26,0:22:7.66:0,8,142	0/1:7,3:10:70.99:174,0,71	0/1:14,0:13:8.20:8,0,99	0/0:23,0:29:10.89:0,11,79	0/0:23,0:21:14.29:0,14,89	1/1:9,10:17:12.04:216,12,0	1/1:9,12:21:12.04:194,12,0	1/1:3,10:13:3.01:54,3,0	1/1:7,8:15:6.02:102,6,0	0/0:27,0:28:62.36:0,62,595	0/0:16,0:21:31.87:0,32,259	0/0:5,0:7:12.34:0,12,78
chr10	92662769	.	C	CTCTCTG	12549.75	PASS	AB=0.980;AC=37;AF=0.661;AN=56;BaseQRankSum=-2.548;DP=633;FS=0.000;HRun=0;HaplotypeScore=272.3640;InbreedingCoeff=0.4918;MQ=34.59;MQ0=25;MQRankSum=-2.799;QD=26.64;ReadPosRankSum=-1.862;VQSLOD=3.7459;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,8:25:2.98:47,3,0	1/1:4,7:9:5.14:191,5,0	0/0:27,0:8:15.02:0,15,235	0/0:31,0:6:9.48:0,9,130	1/1:15,6:20:18.04:457,18,0	1/1:11,5:12:15.01:167,15,0	1/1:2,15:14:3.01:53,3,0	0/1:43,0:36:99:162,0,279	1/1:13,11:23:45.49:1301,45,0	1/1:15,11:25:66.16:1743,66,0	1/1:2,18:19:36.12:1173,36,0	0/0:25,0:24:20.98:0,21,230	0/0:18,0:15:25.86:0,26,277	0/1:21,0:20:9.14:9,0,39	1/1:16,8:20:2.87:15,3,0	1/1:13,10:23:33.08:660,33,0	1/1:20,6:21:2.90:404,3,0	0/1:11,0:10:22.04:22,0,179	1/1:13,3:13:24.07:577,24,0	1/1:22,9:29:32.90:1448,33,0	1/1:24,2:19:29.97:630,30,0	0/0:20,0:18:12.04:0,12,158	0/0:24,0:24:8.42:0,8,96	0/0:17,0:16:5.95:0,6,57	0/1:15,0:15:6.12:6,0,34	1/1:21,12:30:44.08:1530,44,0	1/1:18,9:23:59.79:1638,60,0	0/1:8,1:7:3.92:316,0,4
chr10	92662777	.	GTCTCTGTGTC	G	7719.69	PASS	AB=0.969;AC=31;AF=0.554;AN=56;BaseQRankSum=0.075;DP=618;FS=3.220;HRun=0;HaplotypeScore=292.8757;InbreedingCoeff=0.0999;MQ=32.39;MQ0=37;MQRankSum=-3.315;QD=15.82;ReadPosRankSum=0.038;VQSLOD=2.8983;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,3:23:2.88:57,3,0	0/1:12,0:9:65.73:122,0,66	0/0:22,0:5:9.03:0,9,133	0/0:20,0:4:8.98:0,9,119	1/1:17,3:19:14.42:250,14,0	0/0:16,0:12:11.17:0,11,255	0/1:20,0:17:1.35:1,0,181	0/1:37,0:30:99:160,0,214	1/1:21,4:23:38.69:799,39,0	1/1:28,2:24:55.84:1181,56,0	1/1:19,1:18:36.12:705,36,0	0/1:23,0:22:25.48:25,0,188	0/1:21,0:20:65.36:65,0,273	1/1:20,0:20:8.45:44,8,0	1/1:19,2:17:6.01:109,6,0	0/1:21,0:21:99:191,0,290	1/1:30,0:24:12.08:399,12,0	0/0:12,0:11:12.90:0,13,226	0/1:16,1:10:36.08:383,0,36	0/1:25,4:26:34.85:813,0,35	1/1:23,1:17:5.45:198,5,0	0/0:17,0:17:12.01:0,12,182	0/0:24,0:23:9.39:0,9,123	0/0:19,0:18:3.48:0,3,30	0/1:16,0:16:5.70:6,0,48	0/1:34,0:31:99:891,0,154	1/1:26,5:27:1.92:1088,2,0	0/1:8,2:8:94.29:231,0,94
chr10	92662783	.	GTGTC	G	3638.90	PASS	AB=0.902;AC=29;AF=0.518;AN=56;BaseQRankSum=5.443;DP=597;FS=1.566;HRun=0;HaplotypeScore=276.4831;InbreedingCoeff=-0.1456;MQ=32.84;MQ0=35;MQRankSum=-2.525;QD=7.64;ReadPosRankSum=-3.595;VQSLOD=1.9409;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:22:2.98:29,3,0	0/1:13,0:10:69.88:88,0,70	0/0:14,1:3:9.03:0,9,159	0/0:15,0:4:5.49:0,5,84	1/1:21,0:20:16.71:168,17,0	0/0:18,0:14:21.07:0,21,516	0/1:20,0:18:1.42:1,0,280	0/0:33,0:25:49.84:0,50,380	1/1:24,1:23:38.58:368,39,0	0/1:28,1:23:99:291,0,244	1/1:16,0:14:36.06:349,36,0	0/1:16,4:19:99:269,0,207	0/1:11,10:20:99:206,0,159	1/1:13,9:22:11.77:212,12,0	1/1:21,0:17:6:53,6,0	0/1:24,0:24:33.92:34,0,575	0/1:29,0:24:98.96:178,0,99	0/1:8,5:12:99:113,0,114	0/1:18,0:11:99:100,0,117	0/1:27,0:24:35.93:367,0,36	1/1:22,0:15:9.29:88,9,0	0/0:11,9:20:12.01:0,12,223	0/1:14,11:24:22.86:23,0,130	0/0:16,3:18:3.01:0,3,62	0/1:8,10:18:42.41:42,0,63	0/1:31,0:28:99:169,0,360	0/1:28,0:26:69.22:406,0,69	0/1:7,0:5:70.21:84,0,70
chr10	92662957	.	TCACACACACACACA	T	5406.13	PASS	AB=0.806;AC=35;AF=0.648;AN=54;BaseQRankSum=7.445;DP=651;FS=20.693;HRun=0;HaplotypeScore=243.1638;InbreedingCoeff=0.0588;MQ=59.57;MQ0=3;MQRankSum=-7.653;QD=10.68;ReadPosRankSum=-2.100;VQSLOD=2.2100;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:32:12.01:193,12,0	1/1:4,0:10:9.50:294,10,0	./.	0/0:25,0:18:3.87:0,4,25	0/1:20,0:30:11.86:12,0,152	1/1:10,0:18:12.04:388,12,0	1/1:21,0:30:5.87:186,6,0	1/1:26,0:25:6:52,6,0	0/1:19,0:21:26.05:26,0,204	0/0:10,0:19:0.73:0,1,356	0/0:11,0:16:1.93:0,2,148	1/1:14,15:29:15.52:586,16,0	1/1:12,8:21:9.03:283,9,0	1/1:10,11:23:15.05:564,15,0	1/1:10,0:26:21.07:684,21,0	1/1:14,0:21:21.07:680,21,0	0/1:22,0:24:82.73:92,0,83	0/1:10,7:16:11.97:225,0,12	0/1:17,0:17:7.75:8,0,34	0/1:13,0:21:23.42:23,0,50	0/0:33,0:34:14.24:0,14,170	1/1:20,12:31:12.04:386,12,0	1/1:11,7:19:9.03:249,9,0	1/1:23,13:36:2.42:117,2,0	0/1:13,2:16:4.50:284,0,4	0/1:17,0:22:48.25:48,0,216	0/0:17,0:18:0.25:0,0,137	0/1:5,0:10:26.27:26,0,37
chr10	92663597	.	T	TAC	1419.71	PASS	AB=0.739;AC=17;AF=0.315;AN=54;BaseQRankSum=-5.347;DP=538;FS=0.755;HRun=0;HaplotypeScore=102.9458;InbreedingCoeff=0.1294;MQ=63.28;MQ0=3;MQRankSum=3.577;QD=5.11;ReadPosRankSum=-1.337;VQSLOD=2.8344;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:32:6.15:0,6,29	0/0:3,0:3:2.90:0,3,16	./.	0/1:29,0:16:0:0,0,0	0/0:10,0:18:11.16:0,11,52	0/1:8,7:15:42.89:107,0,43	1/1:28,1:29:11.36:104,11,0	1/1:24,0:24:7.70:63,8,0	0/0:8,0:20:25.68:0,26,131	0/0:14,0:16:5.68:0,6,28	0/0:4,0:8:2.84:0,3,14	0/1:10,9:21:14.93:206,0,15	1/1:13,6:20:9.03:135,9,0	0/1:13,7:23:2.88:123,0,3	0/0:14,0:14:18.51:0,19,190	0/1:7,6:14:53.97:78,0,54	0/0:26,0:27:32.35:0,32,280	0/1:7,11:22:38.59:268,0,39	0/0:9,0:12:5.68:0,6,28	0/0:9,0:17:9.98:0,10,53	0/0:19,0:23:2.99:0,3,23	0/1:13,10:23:31.84:78,0,32	1/1:9,5:15:6.02:90,6,0	0/1:17,10:27:18:164,0,18	0/1:14,1:15:17.79:161,0,18	0/0:8,0:19:5.68:0,6,28	0/0:9,0:17:16.71:0,17,81	0/0:3,0:5:2.84:0,3,14
chr10	92663696	.	TAATTCCTTCTATGCTTTTTTTTTTTTCTGGTAAAGGTCAGATTAGCAAAC	T	5601.01	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=2.909;DP=399;FS=1.626;HRun=0;HaplotypeScore=392.6076;InbreedingCoeff=0.8494;MQ=82.31;MQ0=0;MQRankSum=-7.373;QD=66.68;ReadPosRankSum=3.214;VQSLOD=2.1847;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.11:0,57,6775	0/0:4,0:4:12.04:0,12,2182	0/0:11,0:10:30.07:0,30,1091	0/0:18,0:19:56.49:0,56,2033	0/0:19,0:19:54.18:0,54,5856	0/0:17,0:17:42.14:0,42,6480	0/0:18,0:18:48.13:0,48,4222	1/1:11,0:11:29.75:213,30,0	0/0:18,0:18:54.19:0,54,7984	0/0:18,0:18:48.16:0,48,5695	0/0:11,0:11:30.10:0,30,3542	1/1:3,1:4:11.91:441,12,0	1/1:0,14:14:9.03:1143,9,0	1/1:0,7:7:6.02:762,6,0	0/0:18,0:18:45.14:0,45,5213	0/0:17,0:17:45.15:0,45,6129	0/0:27,0:27:69.18:0,69,9443	1/1:0,13:13:9.03:1143,9,0	0/0:18,0:18:51.17:0,51,4747	0/0:18,0:18:48.15:0,48,6683	0/0:16,0:16:45.14:0,45,4613	1/1:0,4:4:3.01:381,3,0	1/1:0,13:13:3.01:375,3,0	1/1:1,9:10:3.01:381,3,0	1/1:0,8:8:6.02:762,6,0	0/0:19,0:19:57.18:0,57,5137	0/0:12,0:12:33.01:0,33,4144	0/0:15,0:15:39.07:0,39,4337
chr10	92663710	.	C	CT	750.43	PASS	AB=0.841;AC=11;AF=0.204;AN=54;BaseQRankSum=-5.801;DP=375;FS=7.626;HRun=12;HaplotypeScore=67.8577;InbreedingCoeff=-0.0269;MQ=75.16;MQ0=0;MQRankSum=1.034;QD=4.36;ReadPosRankSum=-0.625;VQSLOD=0.8826;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,1:20:17.46:17,0,206	0/1:1,5:6:3.87:128,0,4	0/0:6,0:5:5.79:0,6,33	0/1:12,0:13:3.93:4,0,41	0/1:21,5:26:29.06:29,0,238	0/0:2,0:18:24.43:0,24,71	0/0:2,0:14:18.33:0,18,53	./.	0/0:20,0:21:43.74:0,44,312	0/0:19,1:20:2.13:0,2,171	0/1:10,2:12:28.56:29,0,144	0/0:1,0:1:2.22:0,2,7	0/0:14,0:14:6.66:0,7,21	0/0:7,0:7:4.44:0,4,14	1/1:3,15:19:14.96:287,15,0	0/0:3,0:16:20.36:0,20,59	0/1:7,18:28:34.73:349,0,35	0/0:13,0:13:6.66:0,7,21	0/1:12,0:13:9.29:9,0,95	0/0:15,0:17:33.75:0,34,225	0/1:16,1:18:27.54:28,0,90	0/0:4,0:4:2.22:0,2,7	0/0:13,0:13:0:0,0,0	0/0:9,0:9:2.22:0,2,7	0/0:8,0:8:4.44:0,4,14	0/1:13,3:16:5.43:5,0,129	0/0:9,0:9:20.85:0,21,153	0/0:10,3:13:3.65:0,4,190
chr10	92665101	.	AAAAC	A	11092.59	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-0.743;DP=731;FS=3.962;HRun=0;HaplotypeScore=127.1582;InbreedingCoeff=0.9786;MQ=61.74;MQ0=8;MQRankSum=2.691;QD=23.55;ReadPosRankSum=1.921;VQSLOD=4.8404;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:81.28:0,81,1800	0/0:11,0:11:21.07:0,21,401	0/0:32,0:25:31.35:0,31,556	0/0:33,0:26:21.07:0,21,416	1/1:4,20:23:54.18:793,54,0	0/0:24,0:24:57.19:0,57,1230	0/0:27,0:26:60.19:0,60,1169	1/1:9,17:25:51.14:731,51,0	1/1:6,19:25:39.13:637,39,0	1/1:9,19:27:54.16:826,54,0	1/1:7,20:25:48.16:714,48,0	1/1:8,15:23:27.09:441,27,0	1/1:7,13:20:30.10:490,30,0	1/1:5,16:21:21.07:331,21,0	0/0:39,0:36:63.21:0,63,1153	0/0:24,0:24:60.21:0,60,1371	0/0:29,0:29:48.16:0,48,958	1/1:14,11:24:14.95:330,15,0	1/1:7,18:23:51.15:743,51,0	1/1:9,22:31:63.18:972,63,0	1/1:3,16:18:27.09:441,27,0	1/1:9,12:21:33.11:527,33,0	1/1:6,21:25:36.12:588,36,0	1/1:5,17:22:30.10:490,30,0	1/1:10,23:31:48.16:784,48,0	1/1:14,17:30:45.13:679,45,0	1/1:10,24:33:29.62:478,30,0	1/1:4,5:9:6.02:98,6,0
chr10	92665125	.	C	CAACA	2045.58	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-7.180;DP=710;FS=0.640;HRun=0;HaplotypeScore=157.9702;InbreedingCoeff=0.7781;MQ=59.16;MQ0=11;MQRankSum=-0.810;QD=22.48;ReadPosRankSum=3.693;VQSLOD=3.4223;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:76.40:0,76,1280	1/1:2,7:9:15.05:370,15,0	0/1:21,0:16:9.81:10,0,120	0/0:29,0:18:6.53:0,7,341	0/0:26,0:25:41.39:0,41,519	0/0:28,0:28:63.21:0,63,1030	0/0:28,0:26:51.16:0,51,811	0/0:41,0:40:86.69:0,87,1205	0/0:25,0:25:51.16:0,51,657	0/0:33,0:31:72.21:0,72,945	0/0:27,0:25:48.14:0,48,616	0/0:17,0:17:30.10:0,30,379	0/0:17,0:17:41.87:0,42,521	0/0:18,0:18:24.08:0,24,316	1/1:10,22:29:42.14:997,42,0	0/0:24,0:24:54.18:0,54,893	1/1:6,19:28:33.11:814,33,0	0/0:19,0:20:31.95:0,32,409	0/0:30,0:28:48.15:0,48,639	0/0:34,0:33:84.21:0,84,1073	0/0:27,0:25:53.76:0,54,706	0/0:15,0:15:39.12:0,39,512	0/0:25,0:23:45.13:0,45,571	0/0:22,0:22:3.89:0,4,477	0/0:24,0:22:51.16:0,51,636	0/0:25,0:24:57.19:0,57,804	0/0:34,0:34:49.46:0,49,558	0/0:11,0:11:24.08:0,24,323
chr10	92665505	.	CTTT	C	4479.03	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-2.248;DP=515;FS=34.664;HRun=14;HaplotypeScore=85.3739;InbreedingCoeff=0.9885;MQ=65.80;MQ0=2;MQRankSum=-1.565;QD=21.53;ReadPosRankSum=3.805;VQSLOD=1.3802;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:29:52.03:0,52,419	0/0:4,0:9:14.98:0,15,186	0/0:20,0:14:34.66:0,35,364	0/0:13,0:9:18.26:0,18,172	1/1:3,15:19:34.47:398,34,0	0/0:16,0:16:36.08:0,36,584	0/0:12,0:12:33.04:0,33,456	0/0:15,0:29:56.40:0,56,534	1/1:1,20:21:45.13:526,45,0	1/1:2,16:19:47.99:506,48,0	1/1:3,15:19:33.79:413,34,0	0/0:7,0:16:19.21:0,19,176	0/0:7,0:14:32.87:0,33,255	0/0:9,0:14:27.78:0,28,250	0/0:3,0:15:27.08:0,27,371	0/0:16,0:16:45.15:0,45,787	0/0:8,0:17:27.55:0,28,398	0/0:6,0:11:23.95:0,24,251	1/1:9,12:22:28.60:350,29,0	1/1:4,28:32:62.65:729,63,0	1/1:0,6:6:18.05:210,18,0	0/0:11,0:22:53.87:0,54,473	0/0:10,0:22:31.60:0,32,265	0/0:2,0:12:26.92:0,27,240	0/0:6,0:18:35.42:0,35,290	1/1:10,21:31:57.02:664,57,0	1/1:9,22:31:47.71:542,48,0	1/1:3,4:7:12.01:140,12,0
chr10	92666064	.	C	CAG	502.70	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=-1.588;DP=417;FS=17.826;HRun=0;HaplotypeScore=74.4786;InbreedingCoeff=0.7795;MQ=84.14;MQ0=9;MQRankSum=-0.894;QD=13.23;ReadPosRankSum=0.405;VQSLOD=1.9407;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:42.09:0,42,495	1/1:0,5:5:9.03:146,9,0	0/0:43,0:27:35.50:0,35,397	0/0:42,0:22:26.25:0,26,263	0/0:14,0:14:18.06:0,18,220	0/0:21,0:21:27.08:0,27,329	0/0:28,0:28:63.20:0,63,770	0/0:20,0:20:30.09:0,30,356	0/0:11,0:11:18.06:0,18,218	0/0:14,0:13:18.05:0,18,211	0/0:14,0:12:12.03:0,12,135	0/0:10,0:10:21.06:0,21,253	0/0:11,0:10:18.06:0,18,220	0/0:10,0:10:18.06:0,18,220	1/1:4,8:12:9.03:146,9,0	0/0:16,0:17:8.86:0,9,87	1/1:10,4:13:23.33:339,23,0	0/1:7,0:6:0.76:1,0,65	0/0:6,0:5:9.03:0,9,110	0/0:9,0:9:12.04:0,12,147	0/0:14,0:13:23.80:0,24,292	0/0:17,0:17:39.12:0,39,475	0/0:11,0:11:21.01:0,21,226	0/0:10,0:10:24.07:0,24,292	0/0:9,0:9:10.14:0,10,143	0/0:12,0:12:30.08:0,30,356	0/0:11,0:11:19.30:0,19,223	./.
chr10	92666094	.	AGGGAGGGAGG	A	1892.31	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=-1.771;DP=298;FS=1.541;HRun=0;HaplotypeScore=81.6382;InbreedingCoeff=0.3169;MQ=45.10;MQ0=27;MQRankSum=-0.390;QD=15.26;ReadPosRankSum=0.917;VQSLOD=2.0756;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:22:7.95:172,8,0	0/0:4,0:4:12.04:0,12,327	0/0:13,0:5:12.01:0,12,185	0/0:12,0:3:3.01:0,3,44	0/0:12,0:11:14.61:0,15,109	1/1:18,0:18:1.33:414,1,0	1/1:28,0:24:54.52:1096,55,0	0/0:13,0:10:13.71:0,14,237	0/0:9,0:8:15:0,15,145	0/0:15,0:11:27.16:0,27,235	0/0:9,0:6:6.47:0,6,54	0/0:9,0:8:15.42:0,15,467	0/0:8,0:6:14.90:0,15,353	0/0:6,0:6:15.05:0,15,368	0/0:10,0:8:9.03:0,9,182	1/1:2,13:13:6.02:115,6,0	0/1:12,0:10:67.89:68,0,311	0/1:8,0:5:2.50:2,0,202	0/1:6,0:3:9.25:9,0,32	0/0:7,0:7:12.01:0,12,137	0/0:14,0:10:12.48:0,12,112	0/0:9,0:9:27.04:0,27,454	0/0:5,0:5:3.01:0,3,40	0/0:7,0:7:8.94:0,9,202	0/0:9,0:8:11.77:0,12,128	0/1:10,0:9:99:125,0,123	0/1:5,0:4:42.84:43,0,114	./.
chr10	92666102	.	AGG	A	1308.61	PASS	AB=0.994;AC=26;AF=0.500;AN=52;BaseQRankSum=-0.763;DP=312;FS=4.826;HRun=3;HaplotypeScore=61.1452;InbreedingCoeff=0.2830;MQ=43.35;MQ0=31;MQRankSum=1.288;QD=6.00;ReadPosRankSum=2.004;VQSLOD=-0.0190;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:25:10.11:99,10,0	0/0:5,0:5:14.99:0,15,132	0/0:11,0:3:2.98:0,3,22	./.	1/1:12,0:11:14.93:114,15,0	0/1:19,1:19:0.75:144,0,1	1/1:23,1:19:40.11:335,40,0	0/0:16,0:11:5.53:0,6,47	0/1:12,0:11:15.52:104,0,16	1/1:18,0:14:22.37:205,22,0	0/1:7,0:4:14.94:15,0,26	0/0:10,0:9:14.68:0,15,122	0/1:9,0:7:16.79:17,0,81	0/0:4,0:4:11.98:0,12,101	0/0:10,0:8:11.94:0,12,92	1/1:16,0:14:4.22:56,4,0	0/1:14,0:11:24.03:24,0,60	0/1:9,0:6:30.76:31,0,36	1/1:4,2:3:5.94:46,6,0	1/1:8,0:8:3.85:33,4,0	0/1:13,0:9:10.84:41,0,11	0/0:7,3:10:7.57:0,8,89	0/1:6,0:6:0.02:0,0,0	0/0:7,0:7:2.84:0,3,57	0/0:12,0:11:6.25:0,6,36	1/1:13,0:12:10.79:171,11,0	1/1:5,0:4:5.90:42,6,0	./.
chr10	92666104	.	G	GGAGAGA	555	PASS	AB=1.000;AC=31;AF=0.674;AN=46;BaseQRankSum=-2.717;DP=326;FS=5.456;HRun=0;HaplotypeScore=91.4587;InbreedingCoeff=0.0887;MQ=40.98;MQ0=31;MQRankSum=-0.438;QD=2.04;ReadPosRankSum=-2.442;VQSLOD=0.9024;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:26:8.80:75,9,0	0/0:5,0:5:3.01:0,3,55	./.	./.	1/1:12,0:11:3.47:26,3,0	1/1:20,0:20:11.05:114,11,0	1/1:24,0:19:6:63,6,0	1/1:20,0:15:5.45:25,5,0	0/1:13,0:12:41.79:42,0,47	0/1:18,0:14:33.10:33,0,55	0/1:8,0:5:14.94:15,0,44	1/1:8,3:11:2.99:95,3,0	1/1:8,0:6:2.78:24,3,0	./.	0/0:11,0:9:6:0,6,53	1/1:17,0:15:2.97:21,3,0	0/1:12,0:11:24.48:24,0,78	1/1:10,0:7:7.35:76,7,0	./.	0/1:8,0:8:0:0,0,0	0/0:13,0:9:2.60:0,3,17	1/1:11,0:11:2.74:17,3,0	0/1:7,0:7:0:0,0,0	0/1:7,0:7:0:1,0,0	1/1:12,0:11:2.92:17,3,0	0/1:17,0:15:6.14:6,0,17	0/1:6,0:5:0:0,0,0	./.
chr10	92666462	.	AAT	A	1960.03	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.026;DP=587;FS=8.479;HRun=0;HaplotypeScore=76.4382;InbreedingCoeff=0.9887;MQ=86.30;MQ0=0;MQRankSum=0.145;QD=34.39;ReadPosRankSum=1.968;VQSLOD=5.4186;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.21:0,69,1186	1/1:1,10:11:27.09:371,27,0	0/0:14,0:14:39.13:0,39,676	0/0:26,0:26:65.59:0,66,1062	0/0:25,0:25:69.24:0,69,1224	0/0:22,0:22:66.21:0,66,1138	0/0:17,0:17:42.14:0,42,745	0/0:22,0:22:59.87:0,60,1055	0/0:26,0:26:72.25:0,72,1264	0/0:17,0:17:42.14:0,42,746	0/0:21,0:21:63.22:0,63,1102	0/0:20,0:20:57.20:0,57,1011	0/0:25,0:25:75.26:0,75,1331	0/0:20,0:20:57.17:0,57,955	1/1:2,20:22:57.19:783,57,0	0/0:25,0:25:72.25:0,72,1278	1/1:0,24:24:69.23:948,69,0	0/0:14,0:14:42.14:0,42,718	0/0:21,0:21:54.18:0,54,952	0/0:20,0:20:60.19:0,60,1033	0/0:32,0:32:93.30:0,93,1616	0/0:17,0:17:51.17:0,51,905	0/0:15,0:15:39.13:0,39,692	0/0:25,0:25:69.24:0,69,1210	0/0:23,0:23:63.16:0,63,1055	0/0:25,0:25:72.25:0,72,1278	0/0:30,0:30:81.28:0,81,1437	0/0:5,0:5:12.04:0,12,204
chr10	92667659	.	CACAGTCG	C	4583.92	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.572;DP=741;FS=32.366;HRun=0;HaplotypeScore=168.2127;InbreedingCoeff=0.9794;MQ=76.31;MQ0=0;MQRankSum=-12.501;QD=61.94;ReadPosRankSum=1.110;VQSLOD=3.2157;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,5509	0/0:13,0:13:39.12:0,39,1468	0/0:18,0:18:54.14:0,54,1546	0/0:13,0:13:38.81:0,39,825	0/0:27,0:27:78.27:0,78,3016	1/1:4,25:29:63.22:1660,63,0	1/1:2,12:14:33.11:869,33,0	0/0:30,0:30:84.27:0,84,2957	0/0:27,0:27:78.27:0,78,2985	0/0:35,0:35:99:0,102,4087	0/0:20,0:20:60.16:0,60,2132	0/0:31,0:31:87.28:0,87,3083	0/0:16,0:16:48.16:0,48,1938	0/0:34,0:34:99:0,99,3597	0/0:34,0:34:99:0,102,3741	1/1:1,30:31:78.27:2055,78,0	0/0:41,0:41:99:0,120,4588	0/0:23,0:23:69.24:0,69,2657	0/0:22,0:22:66.23:0,66,2549	0/0:30,0:30:90.26:0,90,2996	0/0:37,0:37:99:0,105,4013	0/0:30,0:30:90.31:0,90,3552	0/0:22,0:22:63.22:0,63,2530	0/0:28,0:28:84.25:0,84,3096	0/0:20,0:20:60.21:0,60,2405	0/0:29,0:29:81.27:0,81,3060	0/0:37,0:37:99:0,111,4391	0/0:3,0:3:9.03:0,9,290
chr10	92676340	.	GT	G	14922.13	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=11.912;DP=672;FS=8.278;HRun=1;HaplotypeScore=62.2198;InbreedingCoeff=0.9999;MQ=92.56;MQ0=0;MQRankSum=-4.441;QD=37.87;ReadPosRankSum=3.676;VQSLOD=5.1914;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,50:50:99:1841,132,0	1/1:0,12:12:36.12:503,36,0	0/0:33,0:33:93.29:0,93,1420	0/0:23,0:23:40.36:0,40,840	1/1:0,34:34:96.32:1324,96,0	1/1:0,18:18:45.15:629,45,0	1/1:0,22:22:57.19:797,57,0	0/0:27,0:27:78.25:0,78,1200	1/1:0,17:17:45.15:629,45,0	1/1:0,19:19:57.19:794,57,0	1/1:0,18:18:48.12:649,48,0	0/0:22,0:22:66.21:0,66,1028	0/0:28,0:28:84.29:0,84,1340	0/0:28,0:28:84.25:0,84,1291	1/1:0,25:25:69.23:965,69,0	1/1:0,20:20:57.19:797,57,0	1/1:1,25:26:66.21:907,66,0	0/0:25,0:25:75.26:0,75,1195	1/1:0,22:22:66.20:885,66,0	1/1:0,30:30:87.22:1174,87,0	1/1:0,18:18:48.16:671,48,0	0/0:23,0:23:69.23:0,69,1084	0/0:17,0:17:51.15:0,51,784	0/0:33,0:33:99:0,99,1523	0/0:19,0:19:57.19:0,57,909	1/1:0,25:25:75.22:1014,75,0	1/1:0,27:27:63.21:881,63,0	1/1:0,11:11:33.11:461,33,0
chr10	92676847	.	AC	A	8579.77	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.817;DP=727;FS=2.009;HRun=3;HaplotypeScore=67.5286;InbreedingCoeff=0.9739;MQ=71.55;MQ0=0;MQRankSum=-0.592;QD=34.18;ReadPosRankSum=0.601;VQSLOD=5.3337;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,2072	0/0:14,0:14:39.13:0,39,562	0/0:26,0:26:72.24:0,72,1025	0/0:20,0:20:54.10:0,54,712	1/1:0,29:29:84.26:1040,84,0	0/0:32,0:31:96.32:0,96,1381	0/0:24,0:24:69.23:0,69,993	0/0:36,0:36:99:0,102,1434	1/1:2,25:27:63.20:781,63,0	1/1:1,22:23:69.20:841,69,0	1/1:1,19:20:60.19:740,60,0	0/0:32,0:32:96.31:0,96,1364	0/0:14,0:14:42.08:0,42,546	0/0:28,0:28:81.27:0,81,1160	0/0:19,0:19:57.19:0,57,821	0/0:22,0:22:66.21:0,66,934	0/0:29,0:29:84.28:0,84,1205	0/0:17,0:17:51.17:0,51,734	1/1:0,25:25:72.19:864,72,0	1/1:0,35:35:99:1264,102,0	1/1:0,40:40:99:1339,108,0	0/0:23,0:23:69.23:0,69,992	0/0:31,0:31:90.29:0,90,1275	0/0:25,0:25:75.25:0,75,1078	0/0:34,0:34:99:0,102,1464	1/1:0,21:21:60.19:744,60,0	1/1:0,29:29:75.24:930,75,0	1/1:1,1:2:3.01:37,3,0
chr10	92677675	.	A	AC	37906.90	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-9.781;DP=914;FS=0.564;HRun=1;HaplotypeScore=78.1724;InbreedingCoeff=0.9998;MQ=80.85;MQ0=0;MQRankSum=-11.297;QD=43.92;ReadPosRankSum=6.256;VQSLOD=4.0968;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,59:59:99:2685,169,0	1/1:0,14:14:36.12:574,36,0	0/0:29,0:29:86.05:0,86,1061	0/0:22,0:22:48.16:0,48,651	1/1:0,39:38:99:1774,111,0	1/1:1,25:26:75.25:1188,75,0	1/1:0,36:36:93.25:1456,93,0	1/1:1,29:30:87.30:1385,87,0	1/1:0,42:42:99:1678,105,0	1/1:1,36:37:99:1697,108,0	1/1:0,24:24:63.21:1007,63,0	1/1:0,36:36:99:1582,99,0	1/1:0,40:40:99:1582,99,0	1/1:0,32:32:93.32:1486,93,0	1/1:0,41:41:99:1821,114,0	1/1:0,32:32:93.32:1487,93,0	1/1:0,39:39:99:1582,99,0	1/1:0,19:19:54.18:863,54,0	1/1:2,23:25:72.23:1101,72,0	1/1:0,28:28:78.20:1217,78,0	1/1:0,49:49:99:2253,141,0	1/1:1,34:35:99:1627,102,0	1/1:0,29:29:75.25:1198,75,0	1/1:1,51:52:99:2158,135,0	1/1:0,19:19:54.18:863,54,0	1/1:1,30:31:90.31:1439,90,0	1/1:0,36:36:99:1678,105,0	1/1:0,13:13:33.11:527,33,0
chr10	92677861	.	GCTT	G	4402.60	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.374;DP=760;FS=0.410;HRun=0;HaplotypeScore=104.8459;InbreedingCoeff=0.9998;MQ=70.40;MQ0=1;MQRankSum=-3.815;QD=37.00;ReadPosRankSum=2.113;VQSLOD=5.8248;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,46:48:99:1663,102,0	1/1:0,11:11:33.11:538,33,0	0/0:28,0:27:69.19:0,69,1349	0/0:22,0:21:45.11:0,45,881	0/0:32,0:32:96.33:0,96,2112	0/0:30,0:30:87.27:0,87,1841	0/0:24,0:24:69.24:0,69,1525	0/0:32,0:32:90.29:0,90,1917	0/0:33,0:33:99:0,99,2193	0/0:28,0:28:84.29:0,84,1854	0/0:17,0:17:48.16:0,48,1071	0/0:37,0:37:99:0,108,2352	0/0:24,0:24:66.21:0,66,1429	0/0:33,0:33:99:0,99,2166	1/1:1,32:33:66.23:1076,66,0	0/0:27,0:27:78.27:0,78,1727	1/1:1,26:27:69.24:1126,69,0	0/0:32,0:32:93.28:0,93,2029	0/0:26,0:26:72.21:0,72,1424	0/0:25,0:25:72.25:0,72,1577	0/0:22,0:22:66.23:0,66,1458	0/0:23,0:23:69.24:0,69,1522	0/0:20,0:20:60.18:0,60,1277	0/0:33,0:33:93.32:0,93,2032	0/0:23,0:23:63.17:0,63,1294	0/0:24,0:24:66.23:0,66,1475	0/0:35,0:35:99:0,99,2178	0/0:10,0:10:30.10:0,30,652
chr10	92678307	.	GAC	G	2504.19	PASS	AB=0.889;AC=18;AF=0.321;AN=56;BaseQRankSum=2.831;DP=663;FS=2.268;HRun=0;HaplotypeScore=122.3521;InbreedingCoeff=0.7688;MQ=62.49;MQ0=24;MQRankSum=-2.776;QD=12.04;ReadPosRankSum=1.154;VQSLOD=3.7625;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:60.24:0,60,1106	0/0:6,0:6:14.83:0,15,161	0/0:70,0:33:68.09:0,68,768	0/0:64,0:21:45.62:0,46,500	0/0:11,0:11:18.05:0,18,245	0/1:18,0:17:5.23:5,0,427	0/0:26,0:26:48.16:0,48,753	1/1:19,0:16:30.08:354,30,0	0/0:23,0:23:54.17:0,54,788	0/0:18,0:18:51.16:0,51,760	0/0:16,0:15:16.60:0,17,236	1/1:15,9:24:56.88:666,57,0	1/1:10,9:19:47.46:541,47,0	1/1:5,19:24:10.25:132,10,0	0/0:22,0:22:46.18:0,46,496	0/0:20,0:20:36.12:0,36,540	0/0:18,0:18:38.05:0,38,364	0/1:10,4:14:21.81:250,0,22	0/0:17,0:14:33.09:0,33,508	0/0:25,0:25:36.10:0,36,518	0/0:38,0:33:33.11:0,33,452	1/1:7,17:24:9.03:111,9,0	1/1:4,15:19:6.02:77,6,0	1/1:28,7:32:47.97:525,48,0	1/1:2,10:11:3.01:38,3,0	0/0:20,0:17:47.89:0,48,615	0/0:15,0:14:33.01:0,33,387	0/0:4,0:4:6.02:0,6,94
chr10	92678319	.	CCA	C	836.48	PASS	AB=0.960;AC=19;AF=0.365;AN=52;BaseQRankSum=0.038;DP=653;FS=2.390;HRun=0;HaplotypeScore=128.9089;InbreedingCoeff=0.1007;MQ=53.87;MQ0=41;MQRankSum=1.506;QD=2.98;ReadPosRankSum=1.582;VQSLOD=2.6353;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:18.79:0,19,504	0/1:4,4:9:17.46:69,0,17	0/0:60,0:24:0:0,0,0	./.	0/1:11,0:9:14.01:31,0,14	0/0:16,0:15:0.25:0,0,1	0/0:27,0:25:3.81:0,4,26	0/0:20,0:12:9.03:0,9,103	0/1:22,0:20:30.75:45,0,31	0/1:21,0:20:9.34:55,0,9	1/1:17,0:15:5.97:43,6,0	0/0:26,0:24:14.77:0,15,82	0/1:20,0:19:11.20:11,0,28	0/0:22,0:22:8.28:0,8,44	1/1:19,4:23:24.06:265,24,0	1/1:14,0:14:1.31:7,1,0	1/1:16,3:19:23.80:244,24,0	0/0:13,0:13:9.01:0,9,75	0/1:20,0:17:19.45:33,0,19	0/1:20,0:20:19.96:20,0,84	1/1:47,0:36:6.64:21,7,0	0/0:20,0:20:5.48:0,5,25	0/0:17,0:17:3.22:0,3,13	0/0:30,0:28:9.38:0,9,51	./.	0/1:22,0:17:41.50:42,0,101	0/1:14,0:14:1.60:104,0,2	0/0:3,0:3:3.01:0,3,31
chr10	92678354	.	CAG	C	2568.33	PASS	AB=0.951;AC=41;AF=0.788;AN=52;BaseQRankSum=0.216;DP=563;FS=0.701;HRun=0;HaplotypeScore=101.4084;InbreedingCoeff=0.0957;MQ=36.31;MQ0=129;MQRankSum=1.887;QD=4.91;ReadPosRankSum=-1.860;VQSLOD=2.6111;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:38.27:0,38,517	0/1:13,0:10:12.11:21,0,12	./.	./.	1/1:8,4:9:6.02:89,6,0	1/1:15,0:11:23.81:179,24,0	1/1:17,0:10:14.93:114,15,0	0/1:21,0:7:26.42:26,0,28	1/1:15,3:12:11.10:172,11,0	1/1:11,2:19:10.99:235,11,0	1/1:4,7:7:6.02:91,6,0	1/1:22,0:17:15.05:114,15,0	1/1:19,0:13:29.24:209,29,0	1/1:23,0:12:8.57:50,9,0	0/1:25,0:20:1.72:56,0,2	1/1:11,0:6:14.90:112,15,0	0/1:34,0:25:59.26:64,0,59	0/1:22,0:16:28.29:126,0,28	1/1:15,0:10:19.30:131,19,0	0/1:11,9:14:23.39:74,0,23	1/1:59,2:34:11.99:116,12,0	1/1:10,1:10:5.52:24,6,0	1/1:21,0:15:5.62:35,6,0	1/1:41,0:28:10.98:64,11,0	1/1:17,0:14:0.37:0,0,0	0/1:30,1:24:37.17:305,0,37	1/1:10,7:12:23.05:307,23,0	0/0:5,0:1:2.50:0,2,9
chr10	92678360	.	GAC	G	234.57	PASS	AB=0.882;AC=16;AF=0.333;AN=48;BaseQRankSum=1.829;DP=560;FS=2.125;HRun=0;HaplotypeScore=109.3655;InbreedingCoeff=0.0971;MQ=35.15;MQ0=136;MQRankSum=0.024;QD=0.87;ReadPosRankSum=1.829;VQSLOD=1.9328;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:33:20.97:0,21,238	0/0:13,0:10:8.37:0,8,64	./.	./.	1/1:11,1:9:2.74:12,3,0	0/0:15,0:11:0.73:0,1,2	./.	0/1:20,2:6:11.95:63,0,12	0/1:17,0:10:1.58:32,0,2	0/1:29,0:21:63.10:63,0,77	1/1:9,0:6:5.58:33,6,0	0/1:21,4:19:6.76:7,0,39	0/1:21,3:17:35.36:47,0,35	0/0:17,4:10:2.17:0,2,9	0/0:29,0:25:9.01:0,9,121	0/0:11,0:6:0:0,0,0	0/0:34,0:25:14.37:0,14,255	0/1:17,4:15:36.16:80,0,36	0/0:14,0:9:12.90:0,13,74	1/1:19,0:12:1.72:4,2,0	0/0:55,1:31:2.13:0,2,5	./.	0/1:14,5:13:0.05:0,0,0	0/1:31,7:25:0.05:0,0,0	0/1:9,8:14:1.37:6,0,1	0/0:28,0:21:25.55:0,26,317	0/1:17,0:12:10.05:10,0,27	0/0:5,0:1:3.01:0,3,50
chr10	92678384	.	CAG	C	1253.06	PASS	AB=0.973;AC=32;AF=0.615;AN=52;BaseQRankSum=1.087;DP=555;FS=1.297;HRun=0;HaplotypeScore=85.9268;InbreedingCoeff=-0.0301;MQ=32.53;MQ0=137;MQRankSum=5.352;QD=2.61;ReadPosRankSum=-1.667;VQSLOD=1.6380;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,20:28:2.98:118,3,0	0/1:8,7:12:13.18:16,0,13	./.	./.	0/1:14,0:11:0.16:20,0,0	1/1:14,0:9:5.67:44,6,0	1/1:15,0:7:8.99:74,9,0	0/0:37,0:25:35.83:0,36,320	0/1:14,0:7:2.25:2,0,10	0/1:27,0:17:42.80:43,0,107	1/1:6,0:3:4.55:29,5,0	0/0:21,0:15:5.21:0,5,34	0/1:19,0:13:16.67:17,0,47	0/1:24,0:13:19.75:81,0,20	1/1:21,3:20:14.65:186,15,0	1/1:10,0:4:0.95:3,1,0	1/1:17,21:29:4.02:303,4,0	0/1:22,0:16:52.31:87,0,52	0/1:24,0:19:27.64:28,0,186	0/0:11,0:4:2.80:0,3,13	0/1:58,0:33:2.72:18,0,3	1/1:15,0:10:1.50:50,1,0	0/1:12,0:5:0.05:0,0,0	1/1:40,0:28:7.28:54,7,0	0/1:22,0:18:0.84:93,0,1	0/1:19,0:14:62.71:63,0,113	1/1:15,0:10:3.79:66,4,0	0/0:5,0:1:2.68:0,3,11
chr10	92678394	.	C	CACAG	1694.37	PASS	AB=0.914;AC=21;AF=0.404;AN=52;BaseQRankSum=-2.787;DP=569;FS=30.717;HRun=0;HaplotypeScore=96.5314;InbreedingCoeff=-0.1770;MQ=35.18;MQ0=125;MQRankSum=1.550;QD=4.19;ReadPosRankSum=2.398;VQSLOD=0.0970;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:29:25.29:0,25,198	0/0:14,0:11:1.45:0,1,4	./.	./.	0/1:14,0:11:4.97:38,0,5	0/0:18,0:11:8.80:0,9,82	0/0:18,0:11:17.45:0,17,123	0/1:39,0:30:52.79:53,0,304	0/1:14,0:9:16.57:34,0,17	0/1:27,0:18:56.35:56,0,108	1/1:6,0:3:5.76:38,6,0	0/1:13,10:19:8.71:9,0,28	0/1:14,4:12:5.11:314,0,5	0/1:23,0:14:14.09:248,0,14	0/0:23,0:19:11.18:0,11,138	0/0:16,0:10:20.89:0,21,163	0/0:37,0:28:24.75:0,25,264	0/1:21,2:18:85.31:176,0,85	0/1:8,0:19:99:101,0,133	0/1:14,0:7:12.14:29,0,12	0/1:50,0:31:3.93:27,0,4	1/1:15,0:10:14.91:192,15,0	0/1:15,0:8:0.34:0,0,26	0/1:35,3:27:7.89:45,0,8	1/1:22,1:19:1.15:331,1,0	0/1:20,0:15:42.89:43,0,130	0/1:14,0:10:44.31:111,0,44	0/0:5,0:1:2.98:0,3,22
chr10	92678695	.	TCAAACAAACAAACAAA	T	10447.42	PASS	AB=0.620;AC=31;AF=0.554;AN=56;BaseQRankSum=-4.560;DP=569;FS=3.770;HRun=0;HaplotypeScore=252.4739;InbreedingCoeff=0.7042;MQ=59.50;MQ0=1;MQRankSum=-2.983;QD=32.65;ReadPosRankSum=0.760;VQSLOD=3.9455;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,12:23:9.03:345,9,0	1/1:1,7:8:15.05:644,15,0	0/0:25,0:17:20.96:0,21,433	0/0:20,0:16:12.04:0,12,326	0/1:5,0:19:55.12:257,0,55	1/1:14,17:31:24.08:1046,24,0	0/1:11,10:21:22.94:362,0,23	1/1:31,0:31:21.05:298,21,0	0/0:6,0:27:54.16:0,54,817	0/0:10,0:18:27.02:0,27,423	0/0:11,0:22:29.13:0,29,417	1/1:6,10:15:15.05:661,15,0	1/1:12,11:23:21.07:834,21,0	1/1:3,11:14:18.06:769,18,0	1/1:7,12:19:18.06:789,18,0	1/1:8,16:24:36.12:1556,36,0	1/1:7,9:16:10.71:483,11,0	1/1:8,3:11:6.02:183,6,0	0/0:13,0:25:45.14:0,45,724	0/0:10,0:25:42.14:0,42,646	0/0:10,0:10:5.98:0,6,84	1/1:9,14:23:36.08:1193,36,0	1/1:6,9:15:18.06:728,18,0	0/1:6,11:17:26.96:120,0,27	1/1:9,0:9:9.03:180,9,0	0/0:12,0:32:66.22:0,66,1151	0/0:17,0:39:22.32:0,22,738	0/0:3,0:5:6.02:0,6,97
chr10	92679439	.	A	ATAGTACT	4284.58	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-3.047;DP=361;FS=0.000;HRun=0;HaplotypeScore=84.9914;InbreedingCoeff=0.8518;MQ=96.82;MQ0=1;MQRankSum=-9.628;QD=72.62;ReadPosRankSum=0.718;VQSLOD=5.0551;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,12:20:39.13:1502,39,0	1/1:1,2:3:3.01:116,3,0	0/0:24,0:24:54.05:0,54,1136	0/0:23,0:23:45.06:0,45,953	0/0:2,0:2:6.01:0,6,73	0/0:7,0:7:12.04:0,12,275	0/0:16,0:16:33.11:0,33,784	0/0:31,0:31:66.21:0,66,1521	0/0:5,0:5:15.05:0,15,374	0/0:6,0:6:12.04:0,12,299	0/0:4,0:4:12.04:0,12,265	0/0:17,0:17:45.14:0,45,1005	0/0:12,0:12:27.09:0,27,619	0/0:16,0:16:48.16:0,48,1156	1/1:8,10:18:39.13:1509,39,0	0/0:10,0:10:27.08:0,27,593	1/1:7,11:17:30.10:1157,30,0	0/0:12,0:12:27.09:0,27,673	0/0:9,0:9:18.06:0,18,419	0/0:2,0:2:6.02:0,6,149	0/0:22,0:22:57.18:0,57,1326	0/0:12,0:12:30.10:0,30,717	0/0:19,0:19:48.16:0,48,1141	0/0:23,0:23:60.21:0,60,1458	0/0:10,0:10:27.07:0,27,604	0/0:6,0:6:15.05:0,15,375	0/0:10,0:10:30.10:0,30,723	0/0:4,0:4:12.04:0,12,297
chr10	92679586	.	ATATATATATATATATATATATATATATATATATAAATT	A	1800.50	PASS	AB=1.000;AC=11;AF=0.367;AN=30;BaseQRankSum=1.901;DP=99;FS=0.000;HRun=0;HaplotypeScore=95.1884;InbreedingCoeff=0.3964;MQ=81.09;MQ0=6;MQRankSum=-2.146;QD=42.87;ReadPosRankSum=1.410;VQSLOD=1.0514;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:3.48:0,3,93	./.	0/0:11,0:4:6.82:0,7,59	0/0:15,0:4:5.89:0,6,39	./.	./.	./.	./.	0/0:1,0:1:3.01:0,3,38	./.	./.	1/1:0,14:14:9.03:899,9,0	./.	1/1:1,4:5:3.01:300,3,0	0/0:2,0:2:6.02:0,6,76	./.	0/0:20,0:20:48.08:0,48,6143	1/1:2,12:13:6.02:577,6,0	./.	./.	0/0:1,0:1:3.01:0,3,33	./.	1/1:0,0:4:3.01:65,3,0	0/1:3,0:3:26.87:33,0,27	1/1:0,0:1:3.01:40,3,0	./.	0/0:1,0:1:3.01:0,3,94	0/0:3,0:3:9.03:0,9,456
chr10	92679620	.	AAATT	A	1682.89	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-2.331;DP=287;FS=61.957;HRun=0;HaplotypeScore=60.5162;InbreedingCoeff=0.2807;MQ=52.31;MQ0=2;MQRankSum=2.283;QD=14.63;ReadPosRankSum=0.454;VQSLOD=0.8792;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:6.04:0,6,14	0/0:3,0:3:1.77:0,2,4	0/0:9,0:3:9.03:0,9,175	0/0:18,0:8:23.38:0,23,291	0/0:2,0:2:6.02:0,6,96	0/0:11,0:11:33.11:0,33,458	0/0:2,0:2:6.02:0,6,108	1/1:1,25:25:72.16:998,72,0	0/0:9,0:9:27.09:0,27,381	0/0:1,0:0:3.01:0,3,56	0/0:4,0:4:12.04:0,12,224	0/1:24,0:24:81.94:82,0,409	0/1:10,0:10:99:121,0,199	0/1:13,0:13:45.95:46,0,319	0/0:1,0:1:1.25:0,1,3	0/0:5,0:5:15.05:0,15,279	0/0:34,0:34:36.15:0,36,763	0/1:23,0:23:47.56:48,0,317	0/0:19,0:19:51.16:0,51,822	0/0:3,0:3:9.03:0,9,140	0/0:9,0:9:26.82:0,27,415	1/1:2,0:2:5.98:69,6,0	0/0:1,1:2:3.01:0,3,54	0/1:10,0:10:99:213,0,174	1/1:7,0:7:20.98:261,21,0	0/0:19,0:19:57.19:0,57,889	0/0:12,0:10:36.12:0,36,540	0/0:3,0:3:9.03:0,9,151
chr10	92680866	.	GCTGTCTCTCT	G	2092.99	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-2.208;DP=485;FS=2.232;HRun=0;HaplotypeScore=126.4302;InbreedingCoeff=0.1138;MQ=69.47;MQ0=18;MQRankSum=1.804;QD=8.76;ReadPosRankSum=2.066;VQSLOD=1.8197;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:79.81:80,0,232	1/1:3,0:3:5.99:49,6,0	0/0:53,0:15:14.24:0,14,122	0/0:73,0:18:5.36:0,5,97	0/1:21,0:23:99:135,0,250	1/1:9,0:12:9.92:73,10,0	1/1:7,0:9:21.48:245,21,0	0/0:40,0:40:99:0,111,1604	0/1:11,0:13:54.86:55,0,298	0/1:12,0:13:99:130,0,740	0/1:22,0:22:42.04:215,0,42	0/0:7,0:6:14.96:0,15,215	0/0:10,0:10:29.64:0,30,929	0/0:7,0:7:11.87:0,12,84	1/1:1,7:9:8.96:94,9,0	1/1:9,0:12:20:186,20,0	1/1:1,16:17:12.04:273,12,0	0/0:19,0:20:59.31:0,59,1689	0/1:15,0:13:99:133,0,306	0/1:27,0:28:87.90:246,0,88	0/1:8,0:8:35.92:63,0,36	0/0:8,0:8:11.83:0,12,168	0/0:6,0:6:12.01:0,12,354	0/0:13,0:13:23.59:0,24,467	0/0:9,0:9:12.03:0,12,354	0/1:19,0:19:99:110,0,1022	0/1:12,0:13:99:106,0,198	0/1:9,0:9:86.79:87,0,309
chr10	92680934	.	CATATATATGTATATATAT	C	5581.20	PASS	AB=0.571;AC=23;AF=0.500;AN=46;BaseQRankSum=8.434;DP=257;FS=5.826;HRun=0;HaplotypeScore=127.4755;InbreedingCoeff=0.8217;MQ=46.19;MQ0=2;MQRankSum=-9.035;QD=48.11;ReadPosRankSum=0.394;VQSLOD=4.0169;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:15.05:0,15,530	0/0:3,0:3:9.03:0,9,617	./.	0/0:9,0:1:2.98:0,3,21	1/1:8,3:10:11.83:255,12,0	1/1:9,12:21:57.19:1131,57,0	./.	0/0:49,0:48:99:0,144,7034	1/1:3,2:5:9.03:230,9,0	1/1:5,2:7:14.41:484,14,0	1/1:6,6:12:18.80:325,19,0	./.	0/0:4,0:4:9.02:0,9,424	0/0:4,0:4:6.01:0,6,291	0/0:5,0:5:6.02:0,6,531	1/1:4,2:6:9.03:259,9,0	0/0:19,0:19:18.02:0,18,1290	0/0:13,0:13:39.13:0,39,1825	1/1:6,2:8:21.07:555,21,0	1/1:10,6:13:27.82:549,28,0	0/1:1,0:4:0.12:0,0,1	./.	0/0:8,0:8:9.03:0,9,790	./.	0/0:7,0:7:9.03:0,9,797	1/1:7,5:12:30.06:1070,30,0	1/1:9,2:11:20.82:398,21,0	1/1:1,2:3:9:327,9,0
chr10	92680980	.	C	CTCTATCTATCTATCT	8471.23	PASS	AB=0.953;AC=43;AF=0.796;AN=54;BaseQRankSum=0.532;DP=454;FS=1.345;HRun=0;HaplotypeScore=210.0622;InbreedingCoeff=0.2153;MQ=47.10;MQ0=5;MQRankSum=-1.942;QD=21.61;ReadPosRankSum=0.774;VQSLOD=3.7218;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:16:3.01:94,3,0	0/1:4,0:3:36.96:172,0,37	0/0:14,0:8:14.40:0,14,172	0/0:24,0:8:8.92:0,9,137	1/1:21,0:18:20.22:364,20,0	0/1:34,0:34:99:180,0,648	0/0:10,0:10:5.66:0,6,27	1/1:38,0:38:81.21:1193,81,0	1/1:12,0:13:10.10:321,10,0	1/1:15,0:12:33:748,33,0	1/1:16,0:16:6.93:80,7,0	1/1:0,8:16:3.01:215,3,0	1/1:8,0:8:1.76:321,2,0	1/1:1,10:14:2.97:20,3,0	0/1:12,0:15:29.11:396,0,29	0/1:17,0:17:99:300,0,488	1/1:8,0:26:3.01:182,3,0	0/1:13,0:14:99:324,0,133	1/1:13,0:13:19.51:429,20,0	1/1:32,0:24:44.45:711,44,0	1/1:3,0:3:0.47:1,0,0	1/1:0,3:7:2.97:20,3,0	./.	1/1:4,0:5:0.02:0,0,0	1/1:3,7:14:7.84:439,8,0	1/1:21,0:21:31.27:716,31,0	1/1:22,0:22:48.03:950,48,0	1/1:5,0:5:12.04:295,12,0
chr10	92680984	.	A	ATCTATCTATCTG	4538.74	PASS	AB=1.000;AC=33;AF=0.611;AN=54;BaseQRankSum=3.090;DP=468;FS=0.000;HRun=0;HaplotypeScore=212.1819;InbreedingCoeff=0.0996;MQ=46.89;MQ0=6;MQRankSum=-2.904;QD=11.94;ReadPosRankSum=4.345;VQSLOD=2.9704;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:18:3.01:139,3,0	1/1:4,0:3:9:209,9,0	0/0:13,0:7:11.45:0,11,89	0/0:24,0:8:9.01:0,9,85	1/1:21,0:18:4.98:180,5,0	0/1:34,0:34:99:131,0,288	0/0:12,0:11:5.86:0,6,49	0/1:39,0:37:43.26:71,0,43	1/1:14,0:14:8.97:110,9,0	1/1:15,0:12:8.35:240,8,0	1/1:18,0:18:2.27:88,2,0	1/1:16,0:16:3.01:130,3,0	0/1:8,0:8:9.13:178,0,9	0/0:14,0:14:3:0,3,25	1/1:15,0:15:19.42:392,19,0	0/1:18,0:18:99:531,0,162	1/1:23,0:23:3.01:159,3,0	0/1:15,0:15:71.97:72,0,102	0/1:17,0:17:6.62:147,0,7	1/1:34,0:25:16.80:467,17,0	0/0:4,0:4:5.10:0,5,26	0/0:7,0:7:2.94:0,3,18	./.	0/1:5,0:5:0.34:0,0,1	1/1:14,0:14:5.55:263,6,0	0/1:22,0:22:31.36:244,0,31	0/1:24,0:24:16.01:545,0,16	1/1:6,0:4:7.57:242,8,0
chr10	92680995	.	TA	T	2411.82	PASS	AB=0.766;AC=15;AF=0.278;AN=54;BaseQRankSum=0.836;DP=503;FS=2.404;HRun=1;HaplotypeScore=137.3211;InbreedingCoeff=-0.3855;MQ=47.69;MQ0=11;MQRankSum=-3.089;QD=8.32;ReadPosRankSum=2.964;VQSLOD=1.3994;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:6.01:0,6,71	0/0:5,0:4:8.84:0,9,71	0/0:13,0:6:13.58:0,14,167	0/0:26,0:8:9.02:0,9,137	0/1:7,16:20:51.12:128,0,51	0/0:30,0:30:57.17:0,57,788	0/0:14,0:13:14.13:0,14,189	0/1:24,20:42:99:697,0,779	0/1:8,5:13:75.74:76,0,112	0/1:13,6:16:99:215,0,301	0/1:10,11:21:5.81:6,0,160	0/0:16,0:16:6:0,6,68	0/1:10,1:11:5.16:5,0,148	0/1:15,0:15:10.93:11,0,83	0/0:17,0:17:17.94:0,18,233	0/0:22,0:22:44.93:0,45,652	0/0:23,0:23:6.49:0,6,89	0/1:9,6:15:99:172,0,213	0/1:10,6:15:99:212,0,229	0/1:13,23:27:80.81:225,0,81	0/0:9,0:9:12.04:0,12,180	0/1:9,0:9:7.92:8,0,124	./.	0/0:4,3:7:5.89:0,6,88	0/1:11,1:12:0.19:0,0,93	0/1:10,13:23:99:471,0,359	0/1:11,13:24:99:296,0,362	0/1:8,1:5:32.88:33,0,59
chr10	92680996	.	A	ATCT	342.61	PASS	AB=0.952;AC=7;AF=0.130;AN=54;BaseQRankSum=3.748;DP=512;FS=22.775;HRun=0;HaplotypeScore=156.7577;InbreedingCoeff=-0.1695;MQ=47.86;MQ0=11;MQRankSum=-4.463;QD=2.13;ReadPosRankSum=-1.676;VQSLOD=1.1137;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:0.01:0,0,41	0/0:5,0:4:9.02:0,9,116	0/0:13,0:6:13.02:0,13,153	0/0:25,0:7:9.03:0,9,121	0/0:23,0:20:13.49:0,13,98	0/1:30,0:30:77.94:210,0,78	0/1:7,7:13:52.95:53,0,166	0/1:47,0:45:0.21:0,0,877	0/0:14,0:14:8.99:0,9,105	0/0:20,0:17:37.16:0,37,421	0/0:21,0:21:11.20:0,11,181	0/0:16,0:16:5.51:0,6,55	0/0:11,0:11:16.21:0,16,161	0/0:15,0:15:6.02:0,6,92	0/0:17,0:17:15.05:0,15,216	0/1:22,0:22:87.78:110,0,88	0/0:25,0:25:1.68:0,2,85	0/0:15,0:15:37.22:0,37,310	0/1:16,0:15:70.04:70,0,247	0/0:36,0:27:19.92:0,20,164	0/0:10,0:10:12.04:0,12,184	0/0:9,0:9:9.03:0,9,137	./.	0/0:7,0:7:5.76:0,6,92	0/1:13,0:13:11.12:11,0,79	0/0:24,0:24:59.80:0,60,507	0/0:24,0:24:44.55:0,45,475	0/0:9,0:5:8.51:0,9,80
chr10	92682564	.	C	CATGT	14276.65	PASS	AB=0.809;AC=43;AF=0.796;AN=54;BaseQRankSum=-4.251;DP=872;FS=2.535;HRun=0;HaplotypeScore=200.3634;InbreedingCoeff=0.6660;MQ=54.90;MQ0=5;MQRankSum=-3.783;QD=19.24;ReadPosRankSum=-3.115;VQSLOD=4.0026;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:54.23:0,54,878	0/0:6,0:10:6.01:0,6,56	1/1:36,0:24:0.47:1,0,0	./.	1/1:12,12:26:27.09:637,27,0	1/1:10,0:17:17.09:267,17,0	1/1:20,1:27:9.03:175,9,0	1/1:50,0:50:45.07:639,45,0	1/1:16,22:37:16.40:1365,16,0	1/1:20,29:51:46.48:1955,46,0	0/1:10,13:25:7.69:811,0,8	1/1:34,0:47:36.03:598,36,0	1/1:18,0:28:24.05:344,24,0	1/1:17,1:32:45.15:783,45,0	0/0:17,0:40:54.06:0,54,503	1/1:17,1:32:29.13:506,29,0	0/1:11,0:27:5.50:6,0,345	1/1:13,0:16:12.04:206,12,0	1/1:13,10:23:33.11:758,33,0	1/1:16,20:36:51.18:1198,51,0	1/1:22,16:38:42.14:992,42,0	1/1:25,0:35:17.80:255,18,0	1/1:17,0:21:9.01:128,9,0	0/1:25,0:31:0:0,0,0	1/1:23,0:31:27.06:382,27,0	1/1:14,16:32:10.36:1160,10,0	1/1:21,18:39:48.16:1112,48,0	0/0:7,0:7:6.02:0,6,94
chr10	92682798	.	T	TG	4900.22	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-8.473;DP=589;FS=7.969;HRun=8;HaplotypeScore=69.4578;InbreedingCoeff=0.9807;MQ=80.72;MQ0=0;MQRankSum=-1.498;QD=24.38;ReadPosRankSum=0.499;VQSLOD=5.4254;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:74.91:0,75,660	0/0:7,0:7:18.01:0,18,165	0/0:30,0:30:50.21:0,50,608	0/0:20,0:18:13.56:0,14,264	1/1:2,15:17:45.13:519,45,0	0/0:25,0:25:63:0,63,571	0/0:17,0:17:44.99:0,45,406	0/0:25,0:25:56.93:0,57,511	1/1:1,17:18:45.13:519,45,0	1/1:5,13:18:11.71:373,12,0	1/1:4,14:18:35.85:376,36,0	0/0:25,0:25:59.98:0,60,536	0/0:25,0:25:69.01:0,69,625	0/0:17,0:17:41.95:0,42,375	0/0:20,0:20:48.02:0,48,439	0/0:24,0:24:54:0,54,494	0/0:31,0:31:81.01:0,81,734	0/0:16,0:16:45:0,45,405	1/1:4,12:16:8.63:342,9,0	1/1:7,23:30:54.05:592,54,0	1/1:7,28:35:75.22:866,75,0	0/0:17,1:18:47.48:0,47,395	0/0:18,0:18:30:0,30,274	0/0:18,0:18:48.02:0,48,439	0/0:22,0:22:59.99:0,60,538	1/1:3,10:13:27.08:312,27,0	1/1:4,22:26:60.18:688,60,0	1/1:1,9:10:27.55:313,28,0
chr10	92684328	.	C	CTCCA	11915.46	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=5.451;DP=258;FS=18.842;HRun=0;HaplotypeScore=141.8178;InbreedingCoeff=0.3259;MQ=76.64;MQ0=0;MQRankSum=-6.951;QD=49.03;ReadPosRankSum=4.867;VQSLOD=4.5962;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,4:7:14.08:266,14,0	1/1:1,1:2:5.38:73,5,0	0/1:1,0:9:34.70:78,0,35	0/0:1,0:15:16.52:0,17,174	1/1:1,14:15:42.14:864,42,0	1/1:1,7:8:7.78:442,8,0	1/1:2,5:8:7.78:425,8,0	1/1:4,3:7:3.69:275,4,0	1/1:4,7:11:26.96:560,27,0	1/1:1,4:5:12.04:270,12,0	1/1:2,7:9:18.06:387,18,0	1/1:3,5:8:20.56:376,21,0	1/1:3,10:13:36.12:770,36,0	1/1:3,4:7:17.42:320,17,0	1/1:2,4:6:0.97:252,1,0	1/1:3,9:11:19.65:648,20,0	1/1:0,2:2:6.02:129,6,0	1/1:3,6:9:21.07:458,21,0	1/1:2,6:8:20.43:414,20,0	1/1:4,7:11:10.63:470,11,0	1/1:0,2:3:6.02:114,6,0	1/1:0,8:8:24.08:517,24,0	1/1:3,4:7:14.92:307,15,0	1/1:2,3:5:9.01:152,9,0	1/1:0,10:14:36.12:781,36,0	1/1:9,14:23:28.38:1028,28,0	1/1:1,15:21:56.32:1208,56,0	1/1:0,5:5:15.05:331,15,0
chr10	92684329	.	G	GCTCCAGCCA	34351.12	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-0.260;DP=387;FS=7.552;HRun=0;HaplotypeScore=172.8414;InbreedingCoeff=0.7073;MQ=64.54;MQ0=0;MQRankSum=-6.319;QD=92.34;ReadPosRankSum=2.413;VQSLOD=4.7910;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,4:10:21.06:722,21,0	1/1:3,1:4:9.03:309,9,0	0/1:8,0:8:2.54:3,0,153	0/0:15,0:15:32.68:0,33,517	1/1:11,14:25:48.16:2038,48,0	1/1:4,6:11:33.10:1309,33,0	1/1:6,5:11:29.56:953,30,0	1/1:15,3:18:50.95:1821,51,0	1/1:8,7:15:42.13:1486,42,0	1/1:12,4:16:48.16:1961,48,0	1/1:8,7:15:24:920,24,0	1/1:6,5:11:32.99:1118,33,0	1/1:6,10:16:45.03:1657,45,0	1/1:6,5:11:33.11:1302,33,0	1/1:9,4:13:30.09:1053,30,0	1/1:5,9:13:42.06:1543,42,0	1/1:3,2:5:9.03:389,9,0	1/1:6,6:12:30.10:1206,30,0	1/1:8,6:14:42.13:1581,42,0	1/1:8,7:15:30.09:1168,30,0	1/1:8,3:11:15.05:577,15,0	1/1:3,8:11:27.09:1164,27,0	1/1:8,4:12:26.03:858,26,0	1/1:4,3:7:11.07:393,11,0	1/1:9,10:19:42.13:1606,42,0	1/1:18,15:33:90.26:3392,90,0	1/1:13,16:29:78.11:3169,78,0	1/1:1,5:6:15.05:654,15,0
chr10	92685546	.	A	AGGTTGTTAAGATAC	77230.38	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.542;DP=556;FS=16.466;HRun=0;HaplotypeScore=184.3647;InbreedingCoeff=0.9426;MQ=69.87;MQ0=0;MQRankSum=-9.565;QD=150.25;ReadPosRankSum=4.834;VQSLOD=4.3066;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,7:23:60.21:3310,60,0	1/1:8,8:16:45.15:2536,45,0	0/0:23,0:23:51.65:0,52,1857	0/0:18,0:19:44.57:0,45,1549	1/1:8,9:19:51.17:2711,51,0	1/1:11,13:26:63.22:3904,63,0	1/1:17,12:32:75.26:4619,75,0	1/1:33,7:42:99:5828,99,0	1/1:12,7:20:57.20:3339,57,0	1/1:11,8:23:63.22:3332,63,0	1/1:5,6:13:36.12:1893,36,0	1/1:4,3:11:21.07:1222,21,0	1/1:8,14:24:63.22:4230,63,0	1/1:9,9:20:48.16:3107,48,0	1/1:11,12:27:75.26:4691,75,0	1/1:11,13:26:69.24:4222,69,0	1/1:10,10:22:51.18:3396,51,0	1/1:9,5:15:39.13:2457,39,0	1/1:12,6:18:48.16:3057,48,0	1/1:7,7:18:45.15:2526,45,0	1/1:13,2:17:42.14:2371,42,0	1/1:9,7:16:36.12:2099,36,0	1/1:11,3:15:36.12:1802,36,0	1/1:10,1:12:21.07:1365,21,0	1/1:4,4:9:21.07:1359,21,0	1/1:9,10:20:57.15:3366,57,0	1/1:7,13:28:66.18:4071,66,0	1/1:1,1:2:6.02:418,6,0
chr10	92686537	.	GGA	G	114.94	PASS	AB=1.000;AC=13;AF=0.433;AN=30;BaseQRankSum=-1.004;DP=123;FS=0.000;HRun=0;HaplotypeScore=21.4332;InbreedingCoeff=0.2854;MQ=59.64;MQ0=13;MQRankSum=-0.310;QD=1.77;ReadPosRankSum=-0.347;VQSLOD=0.5650;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:1:1.25:0,1,3	./.	0/0:29,0:6:15.06:0,15,120	0/1:47,0:11:21.64:22,0,95	./.	0/0:2,0:2:5.93:0,6,70	0/0:2,0:2:5.98:0,6,53	1/1:3,3:4:3:114,3,0	./.	1/1:0,0:1:2.92:17,3,0	./.	0/1:3,0:3:13.92:14,0,17	1/1:0,1:1:2.99:24,3,0	./.	./.	0/0:4,0:4:9.03:0,9,121	./.	1/1:1,0:1:2.74:12,3,0	./.	./.	0/0:3,0:4:3.01:0,3,37	1/1:3,0:1:2.96:19,3,0	./.	0/1:1,0:1:0:0,0,0	./.	0/0:3,0:3:8.90:0,9,102	./.	./.
chr10	92686573	.	AGGAGAGGAGAGGAAAG	A	763.98	PASS	AB=1.000;AC=9;AF=0.180;AN=50;BaseQRankSum=1.810;DP=399;FS=3.737;HRun=0;HaplotypeScore=57.5106;InbreedingCoeff=0.4446;MQ=27.33;MQ0=130;MQRankSum=0.683;QD=18.19;ReadPosRankSum=1.175;VQSLOD=0.7321;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:13:18.37:0,18,516	0/0:3,0:2:2.04:0,2,6	0/0:76,0:4:6.02:0,6,153	0/0:128,0:13:21.94:0,22,320	0/0:8,0:5:1.82:0,2,5	1/1:8,0:4:3.01:65,3,0	0/0:11,0:10:0:0,0,0	1/1:7,12:14:29.38:523,29,0	0/0:6,0:6:6.02:0,6,113	0/0:10,0:5:15.04:0,15,338	0/0:8,0:4:8.01:0,8,163	0/0:3,0:3:2.04:0,2,6	1/1:1,0:1:3.01:35,3,0	0/0:4,0:6:1.25:0,1,3	0/0:5,0:1:3.01:0,3,88	0/1:8,0:7:8.85:116,0,9	0/0:7,0:4:5.05:0,5,96	1/1:5,0:2:6.02:150,6,0	0/0:11,0:5:11.25:0,11,261	./.	0/0:11,0:7:8.99:0,9,264	0/0:4,0:4:0.47:0,0,1	./.	0/0:5,0:2:0.47:0,0,1	./.	0/0:7,0:6:18.06:0,18,576	0/0:3,0:3:5.05:0,5,133	0/0:8,0:3:3.01:0,3,32
chr10	92686586	.	AAAG	A	432.84	PASS	AB=1.000;AC=25;AF=0.463;AN=54;BaseQRankSum=1.737;DP=356;FS=0.000;HRun=0;HaplotypeScore=43.7417;InbreedingCoeff=0.3149;MQ=30.80;MQ0=100;MQRankSum=2.457;QD=2.72;ReadPosRankSum=0.987;VQSLOD=0.8131;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:19:29.88:0,30,420	0/0:3,0:3:5.01:0,5,26	0/1:74,0:2:0.83:1,0,20	0/0:106,0:7:7.83:0,8,75	0/0:10,0:7:6.52:0,7,28	1/1:5,0:4:3.01:34,3,0	1/1:12,2:12:3.01:33,3,0	1/1:13,0:12:28.83:227,29,0	0/0:6,0:6:8.90:0,9,60	0/1:8,0:6:22.37:22,0,51	0/0:8,0:8:13.82:0,14,59	0/1:3,0:3:9.67:28,0,10	1/1:1,1:1:3:26,3,0	1/1:4,3:7:0.47:1,0,0	0/0:3,0:1:3.01:0,3,36	1/1:5,1:6:5.21:68,5,0	0/1:5,0:4:18.53:19,0,51	1/1:1,0:1:2.96:19,3,0	0/0:9,0:6:17.91:0,18,145	0/0:8,0:7:14.08:0,14,110	0/1:9,0:7:30.57:31,0,61	0/0:3,1:3:0:0,0,0	./.	0/0:5,1:3:0:0,0,1	1/1:1,0:1:2.99:24,3,0	0/0:8,0:7:6.48:0,6,43	1/1:4,0:4:1.99:5,2,0	1/1:7,0:4:5.98:49,6,0
chr10	92686789	.	A	ACT	5389.88	PASS	AB=0.713;AC=29;AF=0.518;AN=56;BaseQRankSum=-7.314;DP=401;FS=20.005;HRun=0;HaplotypeScore=71.4123;InbreedingCoeff=0.3901;MQ=78.94;MQ0=4;MQRankSum=-1.187;QD=21.82;ReadPosRankSum=4.976;VQSLOD=3.5776;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:26:26.21:26,0,173	0/1:2,0:2:6.76:7,0,10	0/0:35,0:21:47.16:0,47,481	0/0:22,0:12:12.88:0,13,201	1/1:0,16:16:36.06:601,36,0	0/0:3,0:15:31.97:0,32,197	0/0:2,0:18:29.85:0,30,159	0/1:17,0:25:21.21:21,0,209	1/1:0,19:19:32.76:584,33,0	1/1:1,8:11:33.08:494,33,0	1/1:1,3:4:6.02:108,6,0	0/1:10,0:12:2.37:2,0,150	0/1:3,0:6:1.76:2,0,21	0/1:7,0:10:19.93:20,0,21	0/1:0,0:15:33.65:81,0,34	0/0:4,0:14:21.45:0,21,102	0/1:6,0:16:81.81:103,0,82	1/1:0,0:3:7.81:36,8,0	1/1:0,14:17:49.39:775,49,0	1/1:0,16:15:39.51:604,40,0	1/1:0,13:16:27.09:473,27,0	0/0:6,0:10:2.69:0,3,94	0/0:7,0:8:12.14:0,12,129	0/0:10,0:17:25.76:0,26,165	0/0:11,0:12:12.92:0,13,175	1/1:0,20:20:54.17:926,54,0	1/1:0,10:9:23.71:428,24,0	0/1:1,2:3:3.86:99,0,4
chr10	92686806	.	A	AAG	2090.89	PASS	AB=0.833;AC=17;AF=0.304;AN=56;BaseQRankSum=-2.074;DP=474;FS=4.649;HRun=0;HaplotypeScore=93.4535;InbreedingCoeff=0.8621;MQ=74.26;MQ0=4;MQRankSum=-0.697;QD=17.14;ReadPosRankSum=1.988;VQSLOD=3.4160;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:74.56:0,75,769	0/0:2,0:2:5.99:0,6,63	0/0:42,0:23:24.56:0,25,489	0/0:29,0:14:4.03:0,4,137	0/0:14,0:14:33.04:0,33,417	0/0:18,0:18:44.98:0,45,454	0/0:24,0:24:57.09:0,57,647	1/1:8,11:24:37.49:471,37,0	0/0:18,0:18:45.08:0,45,535	0/0:19,0:19:57.11:0,57,719	0/0:6,0:6:11.97:0,12,127	1/1:4,0:18:23.67:300,24,0	1/1:7,0:10:26.86:306,27,0	1/1:3,6:17:17.74:218,18,0	0/0:22,0:22:45.03:0,45,453	0/0:16,0:16:42.01:0,42,421	0/0:19,0:19:53.40:0,53,506	1/1:6,0:9:26.79:278,27,0	0/0:16,0:16:35.95:0,36,364	0/0:13,0:12:29.88:0,30,309	0/0:20,0:20:54.11:0,54,647	1/1:1,0:11:17.89:218,18,0	1/1:4,0:6:6:76,6,0	1/1:4,0:17:24.01:344,24,0	0/1:8,0:10:5:81,0,5	0/0:24,0:24:72.21:0,72,934	0/0:15,0:14:38.94:0,39,390	0/0:3,0:3:9.01:0,9,106
chr10	92687063	.	AAAG	A	4246.10	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=15.874;DP=559;FS=0.384;HRun=0;HaplotypeScore=121.2252;InbreedingCoeff=0.8719;MQ=83.82;MQ0=0;MQRankSum=-8.044;QD=24.69;ReadPosRankSum=4.293;VQSLOD=5.0085;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,3173	0/0:5,0:5:12.02:0,12,193	0/0:21,0:21:62.75:0,63,1273	0/0:25,0:25:68.78:0,69,1302	0/0:19,0:19:57.20:0,57,1299	1/1:17,1:18:8.53:333,9,0	1/1:18,1:19:0.41:443,0,0	0/0:7,1:7:8.89:0,9,69	0/0:20,0:20:60.21:0,60,1403	0/0:28,0:28:81.28:0,81,1882	0/0:10,0:10:27.09:0,27,606	1/1:16,0:16:45.11:497,45,0	1/1:17,0:17:16.04:406,16,0	1/1:17,0:17:32.41:402,32,0	0/0:22,0:22:66.18:0,66,1509	1/1:19,4:23:60.15:694,60,0	0/0:38,0:38:99:0,114,2611	1/1:19,0:19:33.44:508,33,0	0/0:16,0:16:48.16:0,48,1067	0/0:21,0:21:57.20:0,57,1346	0/0:45,0:45:99:0,135,3182	1/1:9,1:10:21.07:280,21,0	0/1:9,0:9:7.09:80,0,7	1/1:16,0:16:42.09:432,42,0	1/1:7,1:8:15.84:173,16,0	0/0:25,0:25:72.21:0,72,1548	0/0:26,0:26:78.27:0,78,1844	0/0:11,0:11:33.11:0,33,780
chr10	92687064	.	AAG	A	4699.06	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=15.003;DP=562;FS=2.197;HRun=0;HaplotypeScore=111.0767;InbreedingCoeff=0.9525;MQ=85.00;MQ0=0;MQRankSum=-8.316;QD=26.11;ReadPosRankSum=2.861;VQSLOD=5.7818;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,2581	0/0:5,0:5:6.02:0,6,116	0/0:22,0:22:58.90:0,59,1005	0/0:26,0:26:70.78:0,71,1065	0/0:19,0:19:57.18:0,57,1040	1/1:7,10:17:35.53:367,36,0	1/1:5,14:19:45.12:497,45,0	1/1:7,0:6:3:28,3,0	0/0:21,0:21:63.20:0,63,1166	0/0:28,0:28:81.28:0,81,1531	0/0:10,0:10:27.06:0,27,483	1/1:3,14:17:48.07:551,48,0	1/1:5,12:17:42.09:473,42,0	1/1:6,11:17:36.10:409,36,0	0/0:22,0:22:63.22:0,63,1216	1/1:4,19:23:60.13:696,60,0	0/0:38,0:38:99:0,111,2087	1/1:3,16:19:54.16:657,54,0	0/0:16,0:16:48.13:0,48,861	0/0:20,0:20:57.20:0,57,1098	0/0:46,0:46:99:0,135,2586	1/1:4,6:10:21.04:216,21,0	1/1:5,4:9:9.89:88,10,0	1/1:1,15:16:42.13:530,42,0	1/1:4,5:9:18.91:189,19,0	0/0:25,0:25:69.22:0,69,1240	0/0:26,0:26:78.27:0,78,1505	0/0:11,0:11:33.11:0,33,637
chr10	92687069	.	CT	C	4263.35	PASS	AB=1.000;AC=23;AF=0.426;AN=54;BaseQRankSum=17.055;DP=543;FS=0.000;HRun=1;HaplotypeScore=101.3727;InbreedingCoeff=0.8930;MQ=87.11;MQ0=0;MQRankSum=-6.445;QD=22.20;ReadPosRankSum=1.518;VQSLOD=4.8504;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,2175	0/0:2,0:2:6.02:0,6,96	0/1:24,0:24:41.58:42,0,645	0/0:25,0:25:6.59:0,7,828	0/0:19,0:19:57.17:0,57,858	1/1:1,12:13:28.63:295,29,0	1/1:3,14:17:42.03:384,42,0	./.	0/0:22,0:22:66.17:0,66,1014	0/0:26,0:26:78.26:0,78,1226	0/0:9,0:9:27.08:0,27,409	1/1:2,14:16:47.70:500,48,0	1/1:0,15:15:39.09:417,39,0	1/1:4,12:16:39.05:376,39,0	0/0:22,0:22:66.20:0,66,1005	1/1:6,19:25:61.18:632,61,0	0/0:36,0:36:99:0,108,1670	1/1:0,17:17:51.06:547,51,0	0/0:15,0:15:45.14:0,45,697	0/0:19,0:19:57.18:0,57,879	0/0:46,0:46:99:0,132,2030	1/1:9,6:15:29.84:252,30,0	1/1:2,5:7:14.89:130,15,0	1/1:1,15:16:42.11:473,42,0	1/1:6,5:11:26.83:216,27,0	0/0:24,0:24:66.22:0,66,1054	0/0:26,0:26:78.26:0,78,1231	0/0:11,0:11:33.11:0,33,527
chr10	92687156	.	AT	A	591.52	PASS	AB=0.841;AC=20;AF=0.357;AN=56;BaseQRankSum=-1.303;DP=493;FS=5.201;HRun=16;HaplotypeScore=84.4111;InbreedingCoeff=0.5805;MQ=55.41;MQ0=15;MQRankSum=2.595;QD=3.11;ReadPosRankSum=3.863;VQSLOD=0.2472;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:30:27.39:0,27,264	0/0:10,1:12:20.11:0,20,188	0/1:14,0:8:1.40:1,0,31	0/0:6,0:6:5.75:0,6,32	0/0:16,0:21:20.57:0,21,207	0/1:21,4:26:29.07:29,0,212	0/0:17,0:15:20.79:0,21,160	0/1:13,13:22:14.98:143,0,15	0/0:15,0:23:20:0,20,200	0/0:18,0:20:17.96:0,18,109	0/0:3,0:5:5.77:0,6,31	1/1:5,5:9:5.83:36,6,0	1/1:7,3:10:13.29:69,13,0	1/1:11,9:20:9.53:47,10,0	0/0:15,0:15:8.79:0,9,167	0/0:12,0:13:13.46:0,13,91	0/0:23,0:25:37.37:0,37,228	1/1:6,14:22:34.21:203,34,0	0/0:16,0:24:41.63:0,42,288	0/0:16,0:24:31.77:0,32,217	0/0:17,0:18:5.60:0,6,127	1/1:4,5:9:2.04:17,2,0	1/1:5,8:13:8.23:53,8,0	1/1:4,4:9:5.69:36,6,0	1/1:5,12:19:24.50:137,24,0	0/0:12,0:14:29.17:0,29,188	0/0:18,0:22:41.41:0,41,238	0/1:2,1:6:6.34:6,0,42
chr10	92688939	.	G	GA	4505.76	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-11.561;DP=401;FS=0.492;HRun=8;HaplotypeScore=45.3451;InbreedingCoeff=0.9426;MQ=80.53;MQ0=0;MQRankSum=-3.269;QD=28.16;ReadPosRankSum=-0.187;VQSLOD=4.9196;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:34:49.30:0,49,685	0/0:5,0:5:15.01:0,15,137	0/0:25,0:21:20.71:0,21,199	0/0:16,0:17:38.99:0,39,331	0/0:14,0:14:30:0,30,274	1/1:0,10:10:24.07:277,24,0	1/1:1,19:20:48.14:554,48,0	1/1:3,16:19:48.11:524,48,0	0/0:19,0:19:54.03:0,54,494	0/0:22,0:22:54.03:0,54,494	0/0:10,0:10:21.01:0,21,192	1/1:1,7:8:21.06:242,21,0	1/1:0,11:11:27.08:312,27,0	1/1:0,7:7:15.04:173,15,0	0/0:12,0:12:30.02:0,30,275	1/1:2,10:12:2.62:284,3,0	0/0:15,0:15:45.02:0,45,412	1/1:2,7:10:26.74:271,27,0	0/0:13,0:13:29.99:0,30,267	0/0:13,0:13:33.01:0,33,302	0/0:16,0:16:45.02:0,45,408	1/1:1,10:11:30.09:346,30,0	1/1:2,14:16:36.11:416,36,0	1/1:1,25:26:66.20:762,66,0	1/1:0,10:10:30.09:346,30,0	0/0:13,0:13:33.02:0,33,302	0/0:12,0:12:30:0,30,274	0/0:1,0:1:3:0,3,27
chr10	92689369	.	G	GAAAC	17202.88	PASS	AB=0.570;AC=31;AF=0.554;AN=56;BaseQRankSum=-7.804;DP=706;FS=6.352;HRun=0;HaplotypeScore=125.2022;InbreedingCoeff=0.9251;MQ=63.59;MQ0=1;MQRankSum=-0.645;QD=38.57;ReadPosRankSum=0.628;VQSLOD=5.0853;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,37:46:11.54:1775,0,12	1/1:6,11:16:33.11:799,33,0	0/0:22,0:17:11.60:0,12,181	0/0:17,0:16:16.85:0,17,197	0/0:17,0:17:45.15:0,45,727	1/1:12,16:28:51.17:1169,51,0	1/1:7,15:24:45.15:980,45,0	1/1:34,7:43:39.10:812,39,0	0/0:27,0:27:63.20:0,63,994	0/0:20,0:20:39.13:0,39,631	0/0:14,0:14:33.11:0,33,525	1/1:6,14:20:42.14:985,42,0	1/1:11,15:28:32.91:802,33,0	1/1:5,15:22:42.14:1018,42,0	1/1:8,14:24:33.11:803,33,0	1/1:14,17:31:42.14:1022,42,0	1/1:7,22:30:20.25:1541,20,0	1/1:13,17:30:39.60:949,40,0	0/0:18,0:18:30.08:0,30,445	0/0:25,0:25:54.17:0,54,842	0/0:22,0:22:48.16:0,48,779	1/1:6,14:21:39.13:910,39,0	1/1:12,7:20:36.12:789,36,0	1/1:10,31:42:81.28:1971,81,0	1/1:1,14:16:36.12:876,36,0	0/0:23,0:24:44.73:0,45,653	0/0:45,0:45:93.32:0,93,1508	0/0:9,0:9:27.09:0,27,438
chr10	92689602	.	GTT	G	3230.05	PASS	AB=0.605;AC=27;AF=0.500;AN=54;BaseQRankSum=-9.223;DP=425;FS=3.963;HRun=13;HaplotypeScore=65.7716;InbreedingCoeff=0.7789;MQ=58.96;MQ0=5;MQRankSum=0.931;QD=14.82;ReadPosRankSum=2.916;VQSLOD=2.6822;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:27:38.13:0,38,417	0/0:5,0:6:15.04:0,15,176	./.	0/0:9,0:8:16.59:0,17,175	0/1:4,1:13:28.57:29,0,96	1/1:2,10:12:30.01:291,30,0	1/1:5,19:24:19.55:351,20,0	1/1:3,13:20:29.10:338,29,0	0/1:4,1:15:0.84:1,0,62	0/0:7,0:14:12.79:0,13,103	0/0:5,0:16:22.85:0,23,106	1/1:2,18:21:56.81:536,57,0	1/1:0,9:9:27.04:262,27,0	1/1:3,7:10:8.41:136,8,0	0/0:6,0:19:29.80:0,30,324	1/1:0,11:12:35.80:332,36,0	0/0:9,0:14:29.60:0,30,280	1/1:3,14:18:30.65:324,31,0	0/0:6,0:15:30.97:0,31,173	0/0:2,0:12:23.44:0,23,124	0/1:4,1:12:7.09:7,0,128	1/1:2,6:8:11.98:116,12,0	1/1:5,12:16:27:262,27,0	1/1:2,8:9:21.03:204,21,0	1/1:2,9:12:20.95:253,21,0	0/0:5,1:24:19.34:0,19,159	0/0:2,1:20:6.82:0,7,93	0/0:2,0:4:10.49:0,10,58
chr10	92690965	.	A	AT	14817.51	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=12.337;DP=719;FS=8.377;HRun=1;HaplotypeScore=106.9849;InbreedingCoeff=0.9972;MQ=74.51;MQ0=0;MQRankSum=0.613;QD=40.93;ReadPosRankSum=2.475;VQSLOD=4.4905;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:93.31:1392,93,0	1/1:0,8:8:21.07:315,21,0	0/0:25,0:25:56.34:0,56,750	0/0:19,0:19:51.15:0,51,646	1/1:0,28:28:84.28:1251,84,0	0/0:28,0:28:84.23:0,84,1047	0/0:14,0:14:36.12:0,36,467	0/0:26,0:26:78.23:0,78,978	1/1:2,26:28:75.25:1123,75,0	1/1:0,32:32:96.26:1339,96,0	1/1:2,23:25:66.18:960,66,0	0/0:21,0:21:63.20:0,63,818	0/0:30,0:30:84.23:0,84,1046	0/0:40,0:40:99:0,120,1498	1/1:1,35:36:93.32:1393,93,0	0/0:29,0:29:81.24:0,81,1025	1/1:0,21:21:60.20:897,60,0	0/0:22,0:22:66.18:0,66,829	1/1:0,12:12:36.08:495,36,0	1/1:0,26:27:78.13:1086,78,0	1/1:1,26:27:72.24:1079,72,0	0/0:27,0:27:81.24:0,81,1026	0/0:31,0:31:93.28:0,93,1179	0/0:19,0:19:57.17:0,57,726	0/0:26,0:26:78.25:0,78,1012	1/1:3,34:37:99:1565,105,0	1/1:1,41:42:99:1708,114,0	1/1:0,5:5:15.05:216,15,0
chr10	92692201	.	A	AT	7636.33	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-9.125;DP=478;FS=4.052;HRun=9;HaplotypeScore=46.9079;InbreedingCoeff=0.9260;MQ=62.38;MQ0=4;MQRankSum=-1.935;QD=24.01;ReadPosRankSum=2.493;VQSLOD=5.6889;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,31:37:96.05:1029,96,0	1/1:0,4:4:12.03:133,12,0	0/0:8,0:6:14.99:0,15,127	0/0:4,0:4:5.83:0,6,42	1/1:7,17:24:25.08:504,25,0	1/1:3,17:20:48.10:518,48,0	1/1:2,8:10:21.06:232,21,0	0/0:33,0:33:92.91:0,93,799	1/1:6,7:12:15.04:166,15,0	1/1:2,16:19:50.97:545,51,0	1/1:6,15:21:39.11:431,39,0	0/0:8,0:8:21:0,21,182	0/0:13,0:13:29.99:0,30,260	0/0:12,0:12:26.98:0,27,234	1/1:2,12:14:4.65:243,5,0	1/1:2,8:10:24.03:253,24,0	1/1:6,22:26:43.20:704,43,0	0/0:18,0:18:36.25:0,36,370	1/1:7,7:14:3.55:242,4,0	1/1:3,21:24:37.12:638,37,0	1/1:0,14:14:36.10:398,36,0	0/0:12,0:12:29.97:0,30,257	0/0:17,0:17:41.94:0,42,358	0/0:7,0:6:15:0,15,130	0/0:28,0:28:80.96:0,81,700	1/1:5,24:29:75.20:829,75,0	1/1:7,14:21:13.09:372,13,0	1/1:3,12:15:36.10:398,36,0
chr10	92692322	.	GGACATC	G	3748.77	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=10.499;DP=504;FS=4.330;HRun=0;HaplotypeScore=107.7373;InbreedingCoeff=0.9925;MQ=87.21;MQ0=0;MQRankSum=-11.044;QD=63.54;ReadPosRankSum=-0.150;VQSLOD=3.5659;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:63.22:1532,63,0	1/1:0,6:6:18.06:461,18,0	0/0:22,0:22:66.21:0,66,2347	0/0:16,0:16:43.59:0,44,1543	0/0:19,0:19:57.20:0,57,2131	0/0:15,0:15:45.14:0,45,1543	0/0:7,0:7:18.05:0,18,580	0/0:32,0:32:96.33:0,96,3581	0/0:17,0:17:51.18:0,51,1891	0/0:36,0:36:99:0,105,3928	0/0:28,0:28:84.28:0,84,2970	0/0:13,0:13:39.13:0,39,1320	0/0:22,0:22:66.23:0,66,2411	0/0:17,0:17:51.16:0,51,1790	1/1:0,18:18:54.18:1338,54,0	0/0:12,0:12:36.12:0,36,1355	1/1:1,6:7:18.06:418,18,0	0/0:8,0:8:24.08:0,24,809	0/0:22,0:22:66.23:0,66,2340	0/0:19,0:19:57.20:0,57,2069	0/0:27,0:27:78.23:0,78,2727	0/0:13,0:13:36.08:0,36,1248	0/0:21,0:21:60.19:0,60,2169	0/0:16,0:16:48.16:0,48,1807	0/0:26,0:26:78.27:0,78,2723	0/0:20,0:20:60.21:0,60,2182	0/0:17,0:17:51.17:0,51,1717	./.
chr10	92692843	.	TA	T	2369.39	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=0.225;DP=356;FS=9.931;HRun=8;HaplotypeScore=68.0476;InbreedingCoeff=0.7552;MQ=77.70;MQ0=1;MQRankSum=-1.409;QD=10.00;ReadPosRankSum=6.286;VQSLOD=0.7939;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:28:54.08:521,54,0	1/1:1,5:6:11.97:106,12,0	0/0:12,0:12:14.32:0,14,148	0/0:9,0:10:20.85:0,21,223	0/0:9,0:9:6.09:0,6,20	1/1:21,0:21:34.81:142,35,0	1/1:16,0:16:21.43:87,21,0	1/1:20,0:19:41.42:221,41,0	0/0:9,0:9:7.52:0,8,30	0/1:13,0:13:10.82:15,0,11	0/0:9,0:9:5.48:0,5,55	1/1:16,0:16:29.46:120,29,0	1/1:8,0:8:16.07:65,16,0	1/1:15,0:15:13.20:53,13,0	1/1:1,4:5:9.01:87,9,0	1/1:11,0:11:24.49:114,24,0	1/1:2,21:23:63.10:608,63,0	1/1:9,0:9:18.74:77,19,0	0/0:15,0:15:5.80:0,6,62	0/0:5,0:12:0.25:0,0,3	0/0:8,0:8:4.28:0,4,15	1/1:3,0:3:5.35:22,5,0	1/1:21,0:21:40.49:182,40,0	1/1:6,0:6:8.10:34,8,0	1/1:16,0:16:26.90:111,27,0	0/0:15,0:15:13.55:0,14,79	0/0:11,0:11:8.04:0,8,35	0/0:9,0:9:11.54:0,12,37
chr10	92692849	.	AAAT	A	5074.97	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=-11.500;DP=324;FS=16.657;HRun=0;HaplotypeScore=70.9915;InbreedingCoeff=0.8750;MQ=71.56;MQ0=1;MQRankSum=-3.490;QD=28.19;ReadPosRankSum=1.878;VQSLOD=3.2983;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:35.04:35,0,256	0/0:5,0:5:11.92:0,12,91	0/0:7,0:7:16.34:0,16,216	0/0:8,0:8:24.08:0,24,390	0/0:4,0:8:19.08:0,19,148	1/1:1,20:21:39.13:633,39,0	1/1:0,17:17:24.08:390,24,0	1/1:2,17:18:51.10:712,51,0	0/0:4,0:6:15.48:0,15,109	0/0:3,0:11:32.80:0,33,268	0/0:5,0:9:26.98:0,27,268	1/1:0,15:15:33.11:536,33,0	1/1:0,9:9:18.06:292,18,0	1/1:1,8:9:15.05:241,15,0	0/0:5,0:5:11.89:0,12,86	1/1:0,11:11:27.09:436,27,0	0/0:23,0:23:10.98:0,11,403	1/1:1,8:9:21.07:342,21,0	0/0:7,0:14:34.74:0,35,336	0/0:8,0:11:12:0,12,105	0/0:2,0:6:16.17:0,16,104	1/1:0,3:3:6.02:98,6,0	1/1:1,20:21:47.88:727,48,0	1/1:0,4:4:9.03:146,9,0	1/1:0,16:16:30.03:487,30,0	0/0:11,0:14:38.72:0,39,356	0/0:4,0:8:20.62:0,21,189	0/0:6,0:9:25.91:0,26,183
chr10	92692850	.	A	AT	1496.91	PASS	AB=0.916;AC=24;AF=0.429;AN=56;BaseQRankSum=-3.593;DP=321;FS=3.934;HRun=0;HaplotypeScore=72.4653;InbreedingCoeff=0.2058;MQ=71.57;MQ0=1;MQRankSum=0.625;QD=6.93;ReadPosRankSum=-1.153;VQSLOD=2.7710;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:66.98:67,0,91	0/0:5,0:5:10.02:0,10,40	0/0:7,0:7:14.72:0,15,164	0/0:8,0:8:19.55:0,20,243	1/1:4,4:8:7.68:110,8,0	0/0:20,0:20:16.20:0,16,40	0/0:17,0:17:9.97:0,10,25	0/1:17,1:17:33.42:112,0,33	0/1:4,2:6:3.41:64,0,3	1/1:4,8:12:26.75:282,27,0	0/1:6,4:10:6.62:133,0,7	0/0:15,0:15:13.71:0,14,34	0/0:9,0:9:7.48:0,7,19	0/0:8,0:8:6.80:0,7,18	0/0:5,0:5:10.11:0,10,49	0/1:11,0:11:6.56:38,0,7	0/1:23,0:23:8.55:9,0,140	0/0:8,0:8:8.72:0,9,21	1/1:6,7:13:0.66:176,1,0	1/1:9,3:12:12:109,12,0	1/1:2,4:6:3.95:89,4,0	0/0:3,0:3:2.49:0,2,6	0/1:20,0:20:8.44:8,0,22	0/1:4,0:4:0.72:23,0,1	0/1:16,0:16:13.39:15,0,13	1/1:11,3:14:3.62:211,4,0	1/1:3,5:8:8.94:141,9,0	0/1:6,3:9:13.27:82,0,13
chr10	92694528	.	AT	A	8035.71	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=14.208;DP=537;FS=2.821;HRun=6;HaplotypeScore=55.8365;InbreedingCoeff=0.9739;MQ=63.01;MQ0=0;MQRankSum=-1.593;QD=27.52;ReadPosRankSum=2.346;VQSLOD=5.5252;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,20:25:33.53:615,34,0	1/1:1,8:9:21.05:226,21,0	0/0:12,0:11:27.08:0,27,341	0/0:9,0:8:17.08:0,17,197	1/1:1,25:26:63.16:677,63,0	0/0:24,0:24:63.20:0,63,829	0/0:9,0:9:27.08:0,27,341	0/0:28,0:28:78.19:0,78,980	1/1:1,20:21:60.15:645,60,0	1/1:0,22:22:66.14:699,66,0	1/1:1,23:24:60.11:632,60,0	0/0:13,0:13:39.11:0,39,499	0/0:16,0:16:45.15:0,45,592	0/0:19,0:19:57.19:0,57,750	1/1:1,10:11:30.07:322,30,0	0/0:15,1:16:15.91:0,16,560	1/1:1,19:20:51.13:548,51,0	0/0:8,0:8:21.07:0,21,274	1/1:4,16:20:48.10:507,48,0	1/1:0,24:24:69.17:742,69,0	1/1:0,9:9:24.06:258,24,0	0/0:29,0:29:72.23:0,72,947	0/0:17,0:17:48.12:0,48,590	0/0:19,1:20:24.89:0,25,659	0/0:25,0:25:72.23:0,72,947	1/1:2,20:22:60.13:635,60,0	1/1:2,46:48:99:1353,126,0	1/1:5,6:11:3.83:176,4,0
chr10	92699175	.	TG	T	1933.87	PASS	AC=36;AF=1.000;AN=36;DP=174;FS=0.000;HRun=1;HaplotypeScore=20.3643;InbreedingCoeff=-0.1192;MQ=16.70;MQ0=64;QD=17.11;VQSLOD=3.3899;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:0,9:8:12:145,12,0	1/1:1,9:7:18.02:229,18,0	1/1:6,3:2:3.01:42,3,0	1/1:7,13:12:36.12:503,36,0	1/1:5,7:5:9.03:126,9,0	1/1:0,4:3:9.03:126,9,0	1/1:0,5:5:9.03:125,9,0	1/1:1,3:3:3:42,3,0	1/1:0,3:2:3.01:42,3,0	./.	1/1:0,6:5:6.02:84,6,0	1/1:0,1:1:3.01:42,3,0	./.	./.	1/1:2,5:2:6.02:84,6,0	1/1:1,2:1:3.01:42,3,0	./.	./.	1/1:0,1:1:3.01:42,3,0	./.	1/1:0,4:4:3.01:42,3,0	1/1:1,9:5:15.05:209,15,0	1/1:0,4:3:3.01:42,3,0	1/1:0,1:1:3.01:42,3,0
chr10	92699306	.	C	CTA	1852.89	PASS	AC=26;AF=1.000;AN=26;DP=162;FS=0.000;HRun=0;HaplotypeScore=27.9424;InbreedingCoeff=-0.1237;MQ=18.16;MQ0=88;QD=23.45;VQSLOD=3.6406;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:2,6:8:3.01:54,3,0	1/1:1,2:3:3.01:54,3,0	./.	./.	1/1:3,1:1:3.01:54,3,0	1/1:2,9:11:27.09:472,27,0	1/1:0,5:5:12.04:215,12,0	1/1:0,1:1:3.01:54,3,0	./.	1/1:6,1:4:3.01:54,3,0	./.	./.	./.	./.	./.	1/1:2,3:4:6.02:108,6,0	./.	./.	1/1:0,1:1:3.01:54,3,0	./.	1/1:3,3:5:6.02:108,6,0	1/1:2,10:12:27.09:485,27,0	1/1:4,2:4:6.02:108,6,0	1/1:6,3:7:6.02:108,6,0
chr10	92700539	.	TA	T	2897.77	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=9.283;DP=284;FS=9.205;HRun=7;HaplotypeScore=31.3987;InbreedingCoeff=0.9281;MQ=55.86;MQ0=10;MQRankSum=-0.491;QD=22.29;ReadPosRankSum=1.352;VQSLOD=2.1862;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:63.26:0,63,929	0/0:4,0:4:12.03:0,12,138	0/0:2,0:2:6.02:0,6,67	0/0:3,0:2:3.01:0,3,33	0/0:10,0:10:24.05:0,24,286	1/1:0,15:15:41.84:330,42,0	1/1:0,7:6:17.96:145,18,0	1/1:5,15:18:42.08:422,42,0	0/0:6,0:6:18.06:0,18,226	0/0:9,0:9:27.09:0,27,339	0/0:13,0:13:30.10:0,30,377	1/1:2,10:10:30.07:306,30,0	1/1:0,7:7:21.05:214,21,0	1/1:1,6:6:18.04:183,18,0	0/0:8,0:8:24.08:0,24,302	1/1:0,6:6:17.96:143,18,0	0/0:19,0:15:42.09:0,42,509	1/1:1,11:12:33.08:337,33,0	0/0:11,0:10:30.10:0,30,378	0/0:7,0:7:15.05:0,15,189	0/0:5,0:5:9.03:0,9,113	1/1:1,3:3:9.02:92,9,0	1/1:1,5:6:15.03:153,15,0	1/1:2,12:12:33.08:337,33,0	1/1:2,18:20:45.10:459,45,0	0/0:12,0:12:36.12:0,36,453	0/0:10,0:9:27.08:0,27,331	0/0:6,0:5:15.05:0,15,189
chr10	92700547	.	TA	T	775.60	PASS	AB=0.923;AC=7;AF=0.125;AN=56;BaseQRankSum=6.461;DP=297;FS=5.044;HRun=7;HaplotypeScore=40.5528;InbreedingCoeff=0.7555;MQ=57.21;MQ0=4;MQRankSum=2.320;QD=19.39;ReadPosRankSum=1.472;VQSLOD=2.9078;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:84.28:0,84,1310	0/0:4,0:4:12.04:0,12,192	0/0:4,0:3:6.02:0,6,92	0/0:5,0:2:4.83:0,5,48	0/0:11,0:11:27.09:0,27,428	1/1:0,15:15:42.12:489,42,0	1/1:0,7:6:18.05:213,18,0	0/0:20,0:20:56.07:0,56,504	0/0:7,0:7:21.06:0,21,312	0/0:11,0:11:33.11:0,33,526	0/0:14,0:14:33.11:0,33,523	0/0:11,0:10:26.06:0,26,148	0/0:7,0:7:17.29:0,17,91	0/0:7,0:7:17.55:0,18,120	0/0:8,0:8:24.08:0,24,383	1/1:0,6:6:18.05:211,18,0	0/0:17,0:16:45.15:0,45,693	0/1:11,1:12:4.52:5,0,136	0/0:11,0:10:30.06:0,30,451	0/0:8,0:8:21.07:0,21,321	0/0:5,0:5:12.04:0,12,187	0/0:4,0:3:7.45:0,7,42	0/0:5,0:5:13.82:0,14,77	0/0:13,0:11:30.33:0,30,169	0/0:18,0:18:42.49:0,42,268	0/0:17,0:17:51.16:0,51,785	0/0:12,0:11:33.11:0,33,520	0/0:8,0:8:24.08:0,24,374
chr10	92702639	.	TACACACACACAC	T	1253.40	PASS	AB=0.975;AC=30;AF=0.682;AN=44;BaseQRankSum=1.463;DP=420;FS=2.156;HRun=0;HaplotypeScore=133.1365;InbreedingCoeff=0.3907;MQ=63.28;MQ0=22;MQRankSum=-2.140;QD=5.62;ReadPosRankSum=0.785;VQSLOD=2.6402;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:15.05:0,15,323	0/0:1,0:1:3.01:0,3,99	./.	./.	0/1:8,1:9:0:0,0,0	./.	./.	1/1:15,0:15:0.47:2,0,0	1/1:13,2:15:3.01:102,3,0	0/1:9,0:8:82.54:83,0,96	1/1:8,0:8:3:26,3,0	./.	0/1:9,0:9:0:0,0,0	1/1:11,0:13:2.93:83,3,0	0/0:17,0:17:12.04:0,12,355	1/1:13,0:15:9.03:251,9,0	0/0:17,0:22:15.52:0,16,423	1/1:12,0:11:2.77:83,3,0	1/1:8,0:8:6.01:82,6,0	0/1:8,0:7:0:0,0,0	1/1:24,0:23:3:25,3,0	1/1:8,0:8:3.01:84,3,0	./.	1/1:30,0:29:6.01:62,6,0	1/1:12,0:12:3.01:84,3,0	0/0:11,0:11:1.55:0,2,4	1/1:14,7:21:9.03:306,9,0	1/1:4,0:3:6.01:108,6,0
chr10	92703179	.	GT	G	866.43	PASS	AB=0.901;AC=39;AF=0.696;AN=56;BaseQRankSum=2.375;DP=163;FS=9.151;HRun=2;HaplotypeScore=33.8183;InbreedingCoeff=-0.1946;MQ=92.24;MQ0=0;MQRankSum=-1.565;QD=5.81;ReadPosRankSum=5.435;VQSLOD=0.2646;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:9:4.97:58,0,5	1/1:2,0:2:4.44:14,4,0	0/1:11,1:11:10.57:11,0,189	0/0:8,0:7:1.22:0,1,32	1/1:7,1:8:17.79:90,18,0	0/1:1,3:4:18.94:27,0,19	0/1:4,0:4:13.56:25,0,14	1/1:7,0:4:9.40:36,9,0	0/1:4,1:5:13.92:45,0,14	1/1:3,0:3:7.46:32,7,0	1/1:5,0:5:12.70:60,13,0	1/1:5,0:5:9.88:38,10,0	1/1:7,0:7:11.90:46,12,0	0/1:2,3:5:15.15:43,0,15	1/1:2,0:2:4.63:16,5,0	1/1:6,0:6:14.87:56,15,0	1/1:5,0:5:10.46:43,10,0	1/1:2,0:2:2.60:10,3,0	0/0:5,0:4:1.99:0,2,46	1/1:6,0:6:14.91:65,15,0	0/1:10,0:10:39.98:40,0,50	0/1:7,1:8:9.49:59,0,9	0/1:10,0:10:29.69:40,0,30	0/1:8,0:8:6.71:32,0,7	0/1:4,0:4:15.40:44,0,15	0/1:3,0:3:5.79:6,0,18	0/1:6,1:7:8.62:64,0,9	1/1:2,0:2:4.74:16,5,0
chr10	92703308	.	AAAAG	A	695.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.797;DP=435;FS=2.229;HRun=0;HaplotypeScore=73.2136;InbreedingCoeff=0.8793;MQ=70.45;MQ0=1;MQRankSum=1.992;QD=26.76;ReadPosRankSum=-3.102;VQSLOD=2.8952;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:70.47:0,70,1620	0/0:4,0:4:12.04:0,12,281	0/0:28,0:14:24.17:0,24,176	0/0:22,0:13:11.87:0,12,307	0/0:14,0:14:39.12:0,39,886	0/0:9,0:9:24.08:0,24,548	0/0:15,0:15:45.15:0,45,872	1/1:5,21:23:55.62:791,56,0	0/0:18,0:18:51.17:0,51,1205	0/0:13,0:13:36.12:0,36,855	0/0:13,0:13:36.12:0,36,852	0/0:12,0:12:36.12:0,36,783	0/0:6,0:6:18.06:0,18,409	0/0:22,0:22:60.20:0,60,1343	0/0:13,0:13:39.13:0,39,868	0/0:17,0:17:48.13:0,48,1094	0/0:15,0:15:39.13:0,39,860	0/0:21,0:21:60.21:0,60,1363	0/0:15,0:15:39.12:0,39,758	0/0:16,0:16:48.16:0,48,1204	0/0:9,0:9:27.08:0,27,647	0/0:11,0:11:30.10:0,30,681	0/0:11,0:11:30.10:0,30,629	0/0:24,0:24:31.19:0,31,1346	0/0:21,0:21:63.22:0,63,1513	0/0:19,0:19:57.19:0,57,1265	0/0:10,0:10:27.09:0,27,572	0/0:5,0:5:9.03:0,9,234
chr10	92703789	.	AAGAGAGAGAGAGAGAGAGAGAG	A	1604.12	PASS	AB=1.000;AC=17;AF=0.315;AN=54;BaseQRankSum=4.366;DP=492;FS=5.819;HRun=0;HaplotypeScore=237.6091;InbreedingCoeff=0.6588;MQ=72.02;MQ0=24;MQRankSum=-3.851;QD=11.22;ReadPosRankSum=-1.865;VQSLOD=1.7907;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:36.10:0,36,1809	0/0:8,0:8:9.03:0,9,396	0/1:38,0:26:0:0,0,0	./.	0/0:14,0:14:18.06:0,18,469	0/0:20,0:19:21.07:0,21,1609	0/0:22,0:21:15.92:0,16,373	0/0:17,0:17:3.01:0,3,39	0/0:16,0:16:21.07:0,21,1130	0/0:11,0:11:22.89:0,23,905	0/0:13,0:12:3.01:0,3,145	1/1:16,2:18:3:173,3,0	1/1:11,3:14:6.02:346,6,0	1/1:16,4:20:9.02:519,9,0	0/0:16,0:18:21.07:0,21,978	0/0:17,0:17:16.87:0,17,699	0/0:21,0:20:33.09:0,33,1430	1/1:9,1:10:2.66:173,3,0	0/0:20,0:20:10.60:0,11,205	0/0:11,0:11:9.03:0,9,422	0/0:24,0:23:27.05:0,27,1084	1/1:6,0:6:3.01:61,3,0	1/1:7,1:8:3.01:142,3,0	1/1:18,0:18:2.99:23,3,0	1/1:6,5:10:7.57:324,8,0	0/0:17,0:16:24.08:0,24,1146	0/0:17,0:17:10.85:0,11,494	0/0:3,0:3:4.83:0,5,199
chr10	92707900	.	AG	A	2014.60	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.813;DP=599;FS=2.353;HRun=3;HaplotypeScore=57.1469;InbreedingCoeff=0.9993;MQ=85.38;MQ0=0;MQRankSum=-0.598;QD=30.52;ReadPosRankSum=2.578;VQSLOD=3.4239;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1468	1/1:0,10:10:27.08:335,27,0	0/0:20,0:20:45.14:0,45,715	0/0:18,0:18:42.06:0,42,531	0/0:22,0:22:66.22:0,66,940	0/0:17,0:17:51.16:0,51,717	0/0:18,0:18:51.15:0,51,715	0/0:24,0:24:72.23:0,72,1005	0/0:17,0:17:51.17:0,51,734	0/0:30,0:30:84.27:0,84,1177	0/0:27,0:27:75.25:0,75,1063	0/0:13,0:13:33.11:0,33,475	0/0:16,0:16:48.16:0,48,691	0/0:23,0:23:66.22:0,66,950	1/1:3,25:28:69.22:856,69,0	0/0:18,0:18:54.17:0,54,759	1/1:0,28:28:78.25:967,78,0	0/0:17,0:17:48.16:0,48,690	0/0:18,0:18:54.15:0,54,741	0/0:19,0:19:51.15:0,51,709	0/0:23,0:23:66.21:0,66,931	0/0:17,0:17:48.16:0,48,691	0/0:22,0:22:63.21:0,63,906	0/0:27,0:27:81.27:0,81,1167	0/0:26,0:26:75.25:0,75,1079	0/0:26,0:26:75.25:0,75,1075	0/0:28,0:28:84.28:0,84,1207	0/0:11,0:11:30.10:0,30,430
chr10	92708353	.	A	ATAT	11388.77	PASS	AC=50;AF=1.000;AN=50;BaseQRankSum=-1.679;DP=328;FS=3.101;HRun=0;HaplotypeScore=35.0818;InbreedingCoeff=-0.0474;MQ=62.73;MQ0=0;MQRankSum=1.054;QD=35.59;ReadPosRankSum=1.071;VQSLOD=4.9711;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:60.21:1233,60,0	1/1:1,3:4:12.04:236,12,0	./.	./.	1/1:6,10:16:24.08:488,24,0	1/1:0,20:20:54.19:1109,54,0	1/1:2,2:4:6.02:123,6,0	1/1:11,15:27:48.08:757,48,0	1/1:1,5:6:9.03:185,9,0	1/1:4,6:11:21.05:362,21,0	1/1:5,13:19:33.11:670,33,0	./.	1/1:5,10:15:2.72:586,3,0	1/1:2,2:5:6.02:123,6,0	1/1:1,1:3:3.01:62,3,0	1/1:1,6:7:18.06:370,18,0	1/1:6,17:25:45.15:924,45,0	1/1:3,16:19:36.12:739,36,0	1/1:6,8:15:27.06:475,27,0	1/1:0,13:13:24.04:451,24,0	1/1:5,0:5:3.01:59,3,0	1/1:3,0:3:3.01:62,3,0	1/1:2,5:7:12.04:247,12,0	1/1:3,1:4:6.02:102,6,0	1/1:6,9:15:24.08:493,24,0	1/1:5,4:9:15.05:298,15,0	1/1:8,13:20:18.06:370,18,0	1/1:4,16:20:42.14:863,42,0
chr10	92710414	.	G	GA	5650.46	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-10.395;DP=576;FS=0.736;HRun=9;HaplotypeScore=62.0543;InbreedingCoeff=0.9584;MQ=78.23;MQ0=0;MQRankSum=-1.048;QD=25.34;ReadPosRankSum=-0.539;VQSLOD=5.2434;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:59.94:0,60,512	0/0:3,0:3:9:0,9,78	0/0:17,0:16:25.35:0,25,230	0/0:16,0:15:15.84:0,16,127	1/1:5,19:24:54.15:597,54,0	0/0:22,0:22:59.97:0,60,517	0/0:14,0:14:29.98:0,30,260	0/0:35,0:36:83.01:0,83,709	1/1:4,10:14:4.25:253,4,0	1/1:5,20:25:57.14:622,57,0	1/1:3,16:20:47.91:485,48,0	0/0:16,0:16:38.99:0,39,339	0/0:20,0:20:56.96:0,57,487	0/0:15,1:16:8.71:0,9,297	0/0:23,0:23:59.10:0,59,516	0/0:15,0:15:29.97:0,30,260	0/0:21,0:21:62.99:0,63,547	0/0:16,0:16:38.99:0,39,339	1/1:6,14:20:42.09:454,42,0	1/1:4,30:34:84.15:903,84,0	1/1:3,16:19:45.12:498,45,0	0/0:19,0:19:44.92:0,45,378	0/0:25,0:25:59.94:0,60,516	0/0:17,0:17:35.98:0,36,312	0/0:35,0:35:77.94:0,78,672	1/1:6,24:30:75.16:809,75,0	1/1:2,19:21:48.13:531,48,0	1/1:1,15:16:45.12:498,45,0
chr10	92712612	.	C	CAA	3109.25	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.126;DP=680;FS=17.030;HRun=0;HaplotypeScore=87.5554;InbreedingCoeff=0.9998;MQ=90.34;MQ0=1;MQRankSum=-4.798;QD=47.11;ReadPosRankSum=0.115;VQSLOD=3.1616;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.26:0,84,1320	0/0:11,0:11:33.11:0,33,538	0/0:29,0:29:75.98:0,76,1334	0/0:25,0:25:71.46:0,71,999	0/0:28,0:28:84.29:0,84,1369	1/1:0,27:28:72.25:1353,72,0	1/1:1,16:17:48.16:894,48,0	0/0:21,0:21:63.20:0,63,985	0/0:21,0:21:63.22:0,63,1028	0/0:28,0:28:84.29:0,84,1369	0/0:31,0:31:93.32:0,93,1514	0/0:24,0:24:69.24:0,69,1126	0/0:17,0:17:51.17:0,51,831	0/0:23,0:23:69.21:0,69,1078	0/0:26,0:26:78.27:0,78,1273	1/1:0,20:20:54.19:1005,54,0	0/0:25,0:25:75.24:0,75,1198	0/0:20,0:20:60.20:0,60,969	0/0:17,0:17:48.16:0,48,759	0/0:34,0:34:99:0,99,1612	0/0:37,0:37:99:0,111,1782	0/0:25,0:25:72.25:0,72,1170	0/0:28,0:28:84.29:0,84,1370	0/0:11,0:11:33.11:0,33,534	0/0:28,0:28:84.29:0,84,1368	0/0:22,0:22:66.23:0,66,1076	0/0:27,0:27:81.28:0,81,1321	0/0:28,0:27:81.28:0,81,1321
chr10	92713826	.	A	AGAG	4748.60	PASS	AB=0.884;AC=21;AF=0.375;AN=56;BaseQRankSum=-6.870;DP=619;FS=4.898;HRun=0;HaplotypeScore=132.1536;InbreedingCoeff=0.7444;MQ=68.23;MQ0=11;MQRankSum=1.102;QD=20.04;ReadPosRankSum=-1.240;VQSLOD=4.5216;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:76.97:0,77,992	0/0:11,0:11:21.07:0,21,289	0/1:25,0:13:10.34:10,0,18	0/0:33,0:13:7.57:0,8,80	1/1:20,5:24:21.53:384,22,0	0/0:26,0:26:60.18:0,60,814	0/0:26,0:26:51.16:0,51,685	0/0:28,0:28:45.13:0,45,595	1/1:3,18:24:45.12:895,45,0	0/1:7,7:15:91.86:366,0,92	1/1:5,13:18:27.04:496,27,0	0/0:11,0:11:27.09:0,27,375	0/0:20,0:20:42.12:0,42,563	0/0:22,0:21:48.16:0,48,672	0/0:25,0:25:60.18:0,60,799	0/0:15,0:14:39.12:0,39,524	0/0:32,0:32:72.07:0,72,966	0/0:14,0:14:23.77:0,24,332	1/1:12,5:14:15.03:260,15,0	1/1:11,5:18:20.66:346,21,0	1/1:12,14:30:33.11:620,33,0	0/0:22,0:22:51.15:0,51,670	0/1:18,0:18:8.58:9,0,327	0/0:30,0:30:57.92:0,58,801	0/0:28,0:26:33.10:0,33,440	1/1:10,12:22:39.13:767,39,0	1/1:5,14:19:26.94:536,27,0	1/1:4,1:5:3.01:60,3,0
chr10	92713871	.	G	GGAA	5243.12	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-0.622;DP=654;FS=13.072;HRun=0;HaplotypeScore=164.3541;InbreedingCoeff=0.9703;MQ=55.56;MQ0=17;MQRankSum=-2.614;QD=26.61;ReadPosRankSum=-1.921;VQSLOD=3.7440;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:71.71:0,72,871	0/0:8,0:8:21.06:0,21,301	0/0:44,0:19:18.15:0,18,541	0/0:38,0:11:26.09:0,26,331	0/0:17,0:16:48.11:0,48,636	0/0:29,0:29:75.09:0,75,896	0/0:29,0:29:57.21:0,57,820	1/1:45,0:45:99:1266,120,0	0/0:20,0:19:33.99:0,34,399	0/0:24,0:24:64.90:0,65,817	0/0:24,0:24:66.14:0,66,891	1/1:14,0:14:37.38:341,37,0	1/1:18,2:20:24.84:490,25,0	1/1:23,1:22:47.07:649,47,0	0/0:17,0:17:43.31:0,43,559	0/0:16,0:16:39.10:0,39,545	0/0:35,0:35:96.56:0,97,1231	1/1:12,0:12:29.60:251,30,0	0/0:14,0:11:29.99:0,30,330	0/0:21,0:21:49.57:0,50,699	0/0:33,0:32:69.01:0,69,926	1/1:22,0:22:57.66:645,58,0	1/1:20,1:21:51.91:486,52,0	1/1:25,0:25:65.94:744,66,0	1/1:14,0:12:29.26:371,29,0	0/0:32,0:32:79.03:0,79,1024	0/0:19,0:19:45.53:0,46,593	0/0:1,0:1:3.01:0,3,45
chr10	92713883	.	AGAG	A	2468.14	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=3.762;DP=627;FS=17.186;HRun=0;HaplotypeScore=168.3994;InbreedingCoeff=0.9115;MQ=59.95;MQ0=7;MQRankSum=-2.429;QD=13.34;ReadPosRankSum=-0.545;VQSLOD=2.2832;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.10:0,78,1231	0/0:8,0:8:24.08:0,24,482	0/0:34,0:21:48.16:0,48,973	0/0:31,0:15:42.13:0,42,804	0/0:20,0:19:50.68:0,51,965	0/0:28,0:28:78.13:0,78,1302	0/0:26,0:26:72.15:0,72,1254	1/1:36,9:45:48.02:707,48,0	0/0:16,0:16:32.97:0,33,530	0/0:28,0:28:71.80:0,72,1338	0/0:24,0:24:66.21:0,66,1292	1/1:12,2:14:4.38:152,4,0	1/1:19,2:21:7.75:362,8,0	1/1:19,5:23:36.92:406,37,0	0/0:20,0:20:47.60:0,48,821	0/0:19,0:19:42.58:0,43,768	0/0:34,0:34:99:0,102,1757	1/1:10,1:11:1.10:66,1,0	0/0:14,0:13:30.96:0,31,496	0/0:24,0:24:53.80:0,54,1189	0/0:33,0:33:84.23:0,84,1551	1/1:18,1:19:33.90:310,34,0	1/1:15,4:19:27.74:248,28,0	1/1:21,1:22:28.28:247,28,0	1/1:8,2:10:25.77:173,26,0	0/0:33,0:33:83.18:0,83,1543	0/0:18,0:18:47.64:0,48,897	0/0:2,0:2:6.01:0,6,88
chr10	92715419	.	TGA	T	1830.68	PASS	AB=0.947;AC=16;AF=0.286;AN=56;BaseQRankSum=1.277;DP=520;FS=0.843;HRun=0;HaplotypeScore=135.5452;InbreedingCoeff=-0.1058;MQ=61.84;MQ0=8;MQRankSum=-0.850;QD=6.81;ReadPosRankSum=-1.670;VQSLOD=3.0465;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:10:38.54:39,0,160	0/0:6,0:6:17.51:0,18,116	0/0:29,0:13:28.91:0,29,277	0/0:29,0:13:38.79:0,39,330	0/0:25,0:25:4.16:0,4,219	0/0:22,0:22:35.68:0,36,365	0/0:18,0:18:26.94:0,27,222	1/1:1,23:24:70.81:724,71,0	0/1:15,0:15:18.60:19,0,95	0/1:29,0:29:25.07:25,0,421	0/1:14,0:14:39.14:39,0,109	0/1:12,2:23:20.51:184,0,21	0/1:19,1:20:70.87:254,0,71	0/0:14,0:14:5.49:0,5,160	0/0:13,0:13:20.92:0,21,168	0/0:19,0:19:29.77:0,30,308	0/0:15,0:15:38.38:0,38,271	0/1:5,2:7:24.73:92,0,25	0/0:21,0:21:48.89:0,49,470	0/1:26,0:26:9.61:10,0,269	0/0:13,0:13:2.41:0,2,104	1/1:13,1:14:17.02:243,17,0	0/1:14,3:17:36.90:37,0,136	0/1:21,1:22:99:135,0,195	0/1:15,1:16:90.25:169,0,90	0/1:31,0:30:26.49:26,0,521	0/0:20,0:20:2.91:0,3,146	0/0:7,0:7:14.99:0,15,174
chr10	92715420	.	GAC	G	1398.96	PASS	AB=0.970;AC=27;AF=0.482;AN=56;BaseQRankSum=1.699;DP=540;FS=2.028;HRun=0;HaplotypeScore=143.2594;InbreedingCoeff=0.0896;MQ=60.61;MQ0=10;MQRankSum=-0.562;QD=3.95;ReadPosRankSum=-1.969;VQSLOD=2.8978;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,4:11:99:116,0,117	1/1:9,0:9:2.92:8,3,0	0/0:28,1:13:2.98:0,3,21	0/0:29,0:13:0.89:0,1,2	1/1:24,0:24:5.14:103,5,0	0/1:22,0:22:6.15:6,0,18	0/0:19,0:19:0.47:0,0,1	1/1:24,0:24:6.99:140,7,0	0/1:16,0:16:14.17:79,0,14	0/1:29,0:29:59.40:236,0,59	1/1:17,0:17:17.64:191,18,0	0/1:22,0:22:10.04:10,0,128	0/1:20,0:19:28.96:29,0,269	0/0:15,0:15:32.52:0,33,427	1/1:15,0:15:1.02:3,1,0	1/1:19,0:19:4.04:15,4,0	0/0:15,0:15:5.19:0,5,23	0/1:9,0:8:9.76:10,0,104	0/1:22,0:22:32.10:57,0,32	1/1:27,0:26:13.30:181,13,0	1/1:15,0:15:8.48:92,8,0	0/0:14,0:14:2.09:0,2,46	0/0:17,0:17:27.09:0,27,391	0/0:23,0:22:1.45:0,1,464	0/0:17,0:17:3.09:0,3,294	0/1:32,0:30:97.02:221,0,97	1/1:21,0:21:5.64:63,6,0	0/0:8,0:7:10.80:0,11,77
chr10	92715440	.	C	CACAAACACAA	9296.69	PASS	AB=0.575;AC=18;AF=0.321;AN=56;BaseQRankSum=-6.008;DP=565;FS=7.122;HRun=0;HaplotypeScore=186.4714;InbreedingCoeff=0.8054;MQ=43.70;MQ0=19;MQRankSum=-4.062;QD=37.79;ReadPosRankSum=-3.651;VQSLOD=3.0227;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:11.24:0,11,230	0/0:11,0:10:11.53:0,12,144	0/0:19,0:2:3.01:0,3,46	0/0:23,0:4:8.99:0,9,81	1/1:6,16:24:26.06:408,26,0	0/0:19,0:19:40.19:0,40,419	0/0:23,0:22:12.57:0,13,235	0/0:23,0:23:32.50:0,32,334	1/1:2,15:20:18.02:651,18,0	1/1:2,23:32:76.47:1873,76,0	1/1:12,3:16:27.02:607,27,0	0/0:21,0:20:20.46:0,20,521	0/0:18,0:17:39.18:0,39,838	0/0:17,0:17:35.19:0,35,961	0/0:16,0:16:20.76:0,21,257	0/0:18,0:18:24.88:0,25,314	0/0:18,0:17:17.65:0,18,240	0/0:7,0:6:18.06:0,18,394	1/1:5,9:20:54.57:1222,55,0	1/1:6,15:30:35.14:890,35,0	1/1:21,0:17:33.69:501,34,0	0/0:14,0:14:14.46:0,14,284	0/0:17,0:17:31.29:0,31,927	0/0:28,0:27:40.98:0,41,1189	0/0:13,0:13:27.45:0,27,798	1/1:6,21:35:89.60:2313,90,0	0/1:6,15:22:17.25:213,0,17	0/1:4,10:14:4.03:618,0,4
chr10	92715476	.	C	CTTTGGG	253.94	PASS	AB=0.952;AC=7;AF=0.130;AN=54;BaseQRankSum=4.241;DP=430;FS=0.000;HRun=0;HaplotypeScore=151.9880;InbreedingCoeff=0.4017;MQ=36.98;MQ0=39;MQRankSum=-3.474;QD=7.94;ReadPosRankSum=0.352;VQSLOD=2.3781;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:13:14.97:0,15,242	1/1:2,0:2:3.01:70,3,0	0/0:8,0:1:3.01:0,3,30	./.	0/0:21,0:20:15.62:0,16,316	1/1:4,1:5:9.46:100,9,0	0/1:9,0:8:3.38:55,0,3	0/0:15,0:13:30.99:0,31,671	0/0:18,0:17:21.86:0,22,440	0/0:25,0:24:56.48:0,56,1429	0/0:18,0:17:4.78:0,5,82	0/0:18,0:16:26.71:0,27,518	0/0:24,0:21:38.92:0,39,787	0/0:14,0:14:18:0,18,306	0/0:2,2:4:4.77:0,5,40	0/1:5,1:5:26.59:146,0,27	0/1:7,0:5:1.07:1,0,21	0/0:10,0:7:21.07:0,21,461	0/0:20,0:17:51.18:0,51,1245	0/0:25,0:23:10.87:0,11,164	0/0:25,0:18:10.28:0,10,197	0/0:13,0:13:9.03:0,9,214	0/0:14,0:13:18.06:0,18,367	0/0:24,0:20:24.06:0,24,409	0/0:10,0:10:12.04:0,12,219	0/0:28,0:24:63.19:0,63,1474	0/0:22,0:22:26.27:0,26,606	0/0:17,0:16:18.06:0,18,450
chr10	92716500	.	TCCTAGGA	T	7110.08	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.418;DP=659;FS=0.862;HRun=0;HaplotypeScore=153.7091;InbreedingCoeff=0.9997;MQ=75.51;MQ0=0;MQRankSum=-14.838;QD=58.76;ReadPosRankSum=0.966;VQSLOD=4.5330;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,108,4168	1/1:0,16:16:42.14:1102,42,0	0/0:16,0:16:48.16:0,48,1705	0/0:15,0:14:39.13:0,39,1374	0/0:32,0:32:93.32:0,93,3584	1/1:3,15:18:39.13:1028,39,0	1/1:5,16:21:42.14:1107,42,0	0/0:22,0:22:66.22:0,66,2533	0/0:33,0:33:99:0,99,3919	0/0:33,0:33:93.32:0,93,3689	0/0:28,0:28:81.28:0,81,3257	0/0:20,0:20:60.19:0,60,2286	0/0:23,0:23:69.21:0,69,2648	0/0:27,0:27:78.27:0,78,3084	1/1:1,24:25:57.20:1502,57,0	1/1:1,21:22:57.20:1502,57,0	1/1:3,16:19:32.96:869,33,0	0/0:14,0:14:42.14:0,42,1696	0/0:23,0:23:66.23:0,66,2611	0/0:28,0:28:78.27:0,78,3021	0/0:42,0:42:99:0,126,4900	0/0:24,0:24:72.23:0,72,2782	0/0:17,0:17:48.16:0,48,1886	0/0:28,0:28:84.26:0,84,3142	0/0:23,0:23:69.24:0,69,2699	0/0:22,0:22:60.20:0,60,2400	0/0:19,0:19:54.18:0,54,2180	0/0:9,0:9:27.09:0,27,1029
chr10	92717968	.	CACACAA	C	4598.78	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-5.483;DP=435;FS=31.550;HRun=0;HaplotypeScore=150.0759;InbreedingCoeff=0.9765;MQ=69.72;MQ0=1;MQRankSum=-9.070;QD=43.38;ReadPosRankSum=-0.193;VQSLOD=3.0325;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:83.77:0,84,1777	0/0:6,0:6:15.05:0,15,391	0/0:23,0:18:47.88:0,48,964	0/0:19,0:15:42.50:0,42,750	1/1:0,10:10:18.02:391,18,0	0/0:18,0:18:45.15:0,45,696	0/0:18,0:18:39.13:0,39,639	0/0:25,0:25:73.98:0,74,1157	0/0:16,0:16:48.16:0,48,1034	1/1:0,11:11:30.09:660,30,0	1/1:0,7:7:15.03:351,15,0	0/0:15,0:15:42.14:0,42,684	0/0:16,0:16:48.16:0,48,808	0/0:22,0:22:60.20:0,60,944	0/0:9,0:9:27.09:0,27,618	0/0:10,0:10:24.08:0,24,419	0/0:27,0:27:72.09:0,72,1805	0/0:5,0:5:15.05:0,15,265	1/1:0,10:11:27.03:465,27,0	1/1:0,23:22:45.01:1066,45,0	1/1:3,8:11:8.99:167,9,0	0/0:15,0:15:30.10:0,30,497	0/0:9,0:8:21.07:0,21,341	0/0:21,0:21:60.19:0,60,939	0/0:25,0:25:69.23:0,69,1153	1/1:0,16:15:36.11:696,36,0	1/1:2,8:9:14.54:364,15,0	1/1:0,7:7:18.06:440,18,0
chr10	92717972	.	CA	C	3926.35	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-1.719;DP=445;FS=1.944;HRun=12;HaplotypeScore=113.6569;InbreedingCoeff=0.7429;MQ=70.83;MQ0=3;MQRankSum=-3.053;QD=10.28;ReadPosRankSum=4.973;VQSLOD=3.0375;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,30:36:38.29:481,38,0	0/0:6,0:6:14.68:0,15,91	0/1:24,0:18:14.80:15,0,153	0/0:21,0:17:35.67:0,36,333	1/1:10,0:10:8.86:27,9,0	1/1:3,0:18:22.40:65,22,0	1/1:4,0:17:18.32:53,18,0	1/1:5,22:26:54.07:458,54,0	1/1:4,13:17:32.86:255,33,0	1/1:11,0:11:17.56:54,18,0	1/1:8,0:8:8.86:27,9,0	1/1:1,14:15:38.81:302,39,0	1/1:2,14:16:41.79:325,42,0	1/1:5,17:22:41.79:325,42,0	0/0:11,0:11:14.70:0,15,92	1/1:1,2:10:18.20:82,18,0	0/0:25,0:25:59:0,59,364	1/1:3,2:5:5.89:46,6,0	1/1:11,0:11:7.47:42,7,0	1/1:23,0:22:28.44:87,28,0	1/1:8,0:8:4.44:13,4,0	1/1:3,12:14:23.89:186,24,0	1/1:1,7:8:17.77:139,18,0	1/1:1,21:22:53.76:417,54,0	1/1:4,22:26:53.71:417,54,0	1/1:16,0:15:11.74:39,12,0	1/1:10,0:9:10.86:33,11,0	1/1:7,0:7:13.32:40,13,0
chr10	92718715	.	CCAGA	C	1624.98	PASS	AB=0.625;AC=23;AF=0.639;AN=36;BaseQRankSum=6.467;DP=373;FS=1.189;HRun=0;HaplotypeScore=29.1098;InbreedingCoeff=0.6048;MQ=23.94;MQ0=107;MQRankSum=-4.576;QD=13.66;ReadPosRankSum=1.522;VQSLOD=2.6672;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:35:48.15:0,48,1315	./.	0/0:20,0:3:9.03:0,9,253	0/0:26,0:3:9.03:0,9,182	1/1:6,12:9:12.04:220,12,0	0/0:26,0:22:36.12:0,36,1042	0/0:21,0:8:12:0,12,280	./.	1/1:0,3:1:3.01:62,3,0	1/1:2,8:5:12.04:250,12,0	1/1:3,3:2:3.01:63,3,0	./.	./.	1/1:1,6:2:3.01:62,3,0	1/1:1,6:2:3.01:62,3,0	0/0:29,0:21:39.13:0,39,1128	./.	./.	./.	1/1:1,7:3:6.02:125,6,0	./.	1/1:9,8:6:6.02:125,6,0	1/1:2,10:8:12.04:250,12,0	./.	1/1:6,7:4:12.04:248,12,0	0/1:4,6:5:74.83:176,0,75	1/1:0,7:2:6.02:125,6,0	./.
chr10	92721749	.	A	AAAC	6296.97	PASS	AB=0.949;AC=31;AF=0.554;AN=56;BaseQRankSum=6.744;DP=675;FS=6.598;HRun=0;HaplotypeScore=124.1498;InbreedingCoeff=0.0120;MQ=49.54;MQ0=39;MQRankSum=-1.672;QD=13.78;ReadPosRankSum=7.840;VQSLOD=2.9057;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:23.99:0,24,223	0/1:12,0:13:38.61:70,0,39	0/0:87,0:11:13.80:0,14,100	0/0:75,0:13:9.49:0,9,94	0/1:16,0:30:81.66:208,0,82	0/0:20,0:17:48.02:0,48,440	0/0:15,0:14:34.16:0,34,276	1/1:16,0:15:9.45:375,9,0	0/1:21,0:22:62.61:303,0,63	0/1:26,0:34:99:319,0,200	0/1:30,0:28:99:196,0,151	1/1:15,0:15:29.05:352,29,0	1/1:9,5:16:9.95:354,10,0	1/1:15,0:15:11.64:320,12,0	0/1:14,0:14:49.53:69,0,50	0/0:7,0:7:17.98:0,18,157	0/1:15,0:15:30.42:30,0,122	1/1:7,0:7:3.46:124,3,0	0/1:31,0:29:99:292,0,114	0/1:38,0:37:93.30:606,0,93	0/1:9,0:9:15.08:56,0,15	1/1:20,0:19:47.61:577,48,0	1/1:8,13:21:24.99:265,25,0	1/1:7,4:11:20.76:272,21,0	1/1:19,0:24:52.40:655,52,0	0/1:28,0:27:77.03:362,0,77	0/1:30,0:30:36.45:418,0,36	0/1:15,0:13:72.85:73,0,107
chr10	92721751	.	A	AC	789.22	PASS	AB=0.801;AC=13;AF=0.232;AN=56;BaseQRankSum=1.036;DP=665;FS=18.932;HRun=0;HaplotypeScore=126.3191;InbreedingCoeff=0.1821;MQ=47.09;MQ0=37;MQRankSum=2.633;QD=5.03;ReadPosRankSum=3.474;VQSLOD=2.3020;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:29.93:0,30,248	0/0:13,0:13:24.42:0,24,151	0/0:80,0:9:19.76:0,20,116	0/0:73,0:11:1.50:0,2,66	0/0:28,0:27:37.63:0,38,202	0/0:19,0:16:47.95:0,48,408	0/0:16,0:15:37.75:0,38,304	0/1:12,5:16:25.08:97,0,25	0/0:22,0:22:39.67:0,40,200	0/0:37,0:35:50.16:0,50,362	0/0:30,0:28:48.83:0,49,287	0/1:10,5:15:2.74:120,0,3	1/1:9,6:15:2.04:74,2,0	0/1:10,5:15:15.43:98,0,15	0/0:14,0:14:21.79:0,22,117	0/0:7,0:7:20.92:0,21,171	0/0:16,0:16:29.47:0,29,182	0/1:5,2:7:12.41:36,0,12	0/0:28,1:27:32.64:0,33,250	0/0:37,1:37:38.11:0,38,262	0/1:10,0:10:16.79:17,0,41	1/1:10,10:19:0.11:148,0,0	0/1:18,5:23:23.17:74,0,23	0/1:7,4:11:4.51:59,0,5	1/1:13,11:24:0.95:211,1,0	0/0:28,0:27:13.66:0,14,198	0/0:30,0:30:27.82:0,28,218	0/0:14,0:12:25.25:0,25,159
chr10	92721753	.	A	AC	676.36	PASS	AB=0.874;AC=10;AF=0.179;AN=56;BaseQRankSum=2.400;DP=654;FS=19.107;HRun=0;HaplotypeScore=126.3960;InbreedingCoeff=-0.2191;MQ=47.54;MQ0=34;MQRankSum=-4.241;QD=2.07;ReadPosRankSum=2.198;VQSLOD=1.0732;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:29.93:0,30,245	0/0:14,0:14:21.87:0,22,155	0/0:73,0:9:17.38:0,17,121	0/1:70,0:11:14.82:15,0,21	0/1:24,4:27:36.45:36,0,90	0/0:20,0:17:50.88:0,51,421	0/0:16,0:15:40.73:0,41,325	0/0:17,0:16:37.83:0,38,207	0/1:17,4:21:51.26:51,0,102	0/1:33,3:34:99:103,0,198	0/1:26,4:28:61.96:148,0,62	0/0:14,0:14:33.25:0,33,210	0/0:15,0:15:26.36:0,26,163	0/0:15,0:15:34.50:0,34,231	0/0:16,0:16:21.35:0,21,116	0/0:7,0:7:20.89:0,21,168	0/0:16,0:16:32.05:0,32,198	0/0:7,0:7:19.50:0,20,118	0/1:26,4:28:92.67:93,0,186	0/1:27,11:37:85.82:196,0,86	0/0:10,0:10:9.96:0,10,55	0/0:19,0:18:45.73:0,46,285	0/0:19,0:19:25.53:0,26,155	0/0:12,0:12:20.81:0,21,154	0/0:24,0:24:51.03:0,51,349	0/1:25,4:28:78.81:79,0,136	0/1:21,10:31:68.46:68,0,191	0/1:12,1:11:30.58:31,0,39
chr10	92721756	.	A	AAAAAAC	10243.06	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=2.533;DP=637;FS=20.583;HRun=0;HaplotypeScore=156.3952;InbreedingCoeff=0.9078;MQ=49.16;MQ0=32;MQRankSum=-2.320;QD=22.22;ReadPosRankSum=3.460;VQSLOD=3.0673;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:23.62:0,24,183	1/1:5,0:15:9.76:210,10,0	0/0:61,0:6:1.44:0,1,27	0/0:59,0:8:13.50:0,13,85	1/1:18,0:23:50.82:656,51,0	0/0:22,0:19:32.98:0,33,307	0/0:15,0:14:21.80:0,22,155	1/1:9,0:13:31.73:218,32,0	1/1:16,0:20:52.65:682,53,0	1/1:31,0:33:50.14:1053,50,0	1/1:15,2:37:69.19:832,69,0	1/1:7,0:14:27.87:174,28,0	1/1:8,0:15:26.49:187,26,0	1/1:10,0:15:22.08:152,22,0	1/1:5,0:21:16.87:366,17,0	0/0:5,0:5:9.48:0,9,96	1/1:13,0:13:17.48:169,17,0	1/1:5,0:8:18.60:123,19,0	1/1:11,0:30:56.61:867,57,0	1/1:17,1:32:81.13:1330,81,0	1/1:5,0:13:9.42:129,9,0	1/1:4,0:20:32.14:251,32,0	1/1:14,0:20:24.72:184,25,0	1/1:5,0:11:20.55:125,21,0	1/1:12,0:25:32.25:271,32,0	1/1:23,0:29:72.75:910,73,0	1/1:22,0:32:71.18:982,71,0	1/1:9,0:10:21.03:370,21,0
chr10	92721762	.	A	AAAC	1340.40	PASS	AB=0.982;AC=22;AF=0.393;AN=56;BaseQRankSum=10.853;DP=527;FS=20.618;HRun=0;HaplotypeScore=129.9675;InbreedingCoeff=-0.5174;MQ=56.81;MQ0=24;MQRankSum=-9.874;QD=3.17;ReadPosRankSum=4.924;VQSLOD=1.0090;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:23.35:0,23,149	0/0:14,0:14:1.94:0,2,67	1/1:40,0:4:7:28,7,0	0/0:41,0:11:22.35:0,22,165	0/1:21,0:20:78.94:117,0,79	0/0:16,0:13:30.87:0,31,289	0/0:8,0:8:18.49:0,18,119	0/1:13,4:16:99:102,0,134	0/1:16,0:17:99:114,0,138	0/1:23,0:22:80.89:81,0,121	0/1:30,0:28:88.10:88,0,185	0/1:11,0:11:24.11:24,0,36	0/1:13,0:13:21.79:96,0,22	0/1:10,0:10:25.05:43,0,25	0/1:17,0:17:29.31:60,0,29	0/0:6,0:6:11.62:0,12,104	0/0:8,0:8:6.60:0,7,100	0/1:8,0:8:3.03:3,0,85	0/1:27,0:25:63.77:64,0,281	0/1:28,0:29:23.94:271,0,24	0/1:13,0:13:11.08:11,0,53	0/1:21,0:20:45.22:45,0,132	0/1:21,0:21:32.71:33,0,93	0/1:12,0:12:13.45:13,0,34	0/1:26,1:27:59.57:60,0,104	0/1:27,0:26:88.46:88,0,197	0/1:31,0:31:99:147,0,262	0/1:7,0:7:9.29:9,0,73
chr10	92723022	.	AC	A	5758.58	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=5.432;DP=404;FS=19.182;HRun=1;HaplotypeScore=61.4663;InbreedingCoeff=0.9880;MQ=65.45;MQ0=0;MQRankSum=-2.523;QD=38.39;ReadPosRankSum=3.785;VQSLOD=3.0717;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:38.82:0,39,497	0/0:12,0:12:36.10:0,36,505	0/0:8,0:8:24.06:0,24,331	0/0:19,0:20:42.73:0,43,621	1/1:1,24:25:72.15:943,72,0	0/0:14,0:14:42.13:0,42,591	0/0:10,0:10:30.07:0,30,398	0/0:23,0:23:69.21:0,69,963	1/1:0,8:8:24.04:311,24,0	1/1:0,14:14:42.13:570,42,0	1/1:0,14:14:39.09:522,39,0	0/0:10,0:10:30.05:0,30,379	0/0:16,0:16:42.12:0,42,589	0/0:7,0:7:21.07:0,21,305	0/0:20,0:20:60.20:0,60,877	0/0:13,0:13:39.12:0,39,552	0/0:21,0:21:60.18:0,60,854	0/0:12,0:12:36.12:0,36,524	1/1:3,8:11:29.96:386,30,0	1/1:0,19:19:57.10:752,57,0	1/1:0,7:7:18.06:251,18,0	0/0:15,0:15:45.15:0,45,658	0/0:19,0:19:57.18:0,57,814	0/0:7,0:7:21.01:0,21,262	0/0:14,0:14:42.12:0,42,594	1/1:0,19:19:51.17:710,51,0	1/1:1,29:30:87.25:1188,87,0	1/1:0,3:3:9.03:125,9,0
chr10	92723070	.	G	GC	2173.26	PASS	AB=0.751;AC=36;AF=0.643;AN=56;BaseQRankSum=6.406;DP=396;FS=56.948;HRun=0;HaplotypeScore=100.1185;InbreedingCoeff=0.6089;MQ=66.79;MQ0=0;MQRankSum=-1.623;QD=7.52;ReadPosRankSum=1.727;VQSLOD=1.4810;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:42.01:0,42,558	1/1:0,0:9:2.23:6,2,0	0/0:5,0:5:13.86:0,14,172	0/0:9,0:8:18:0,18,207	1/1:12,1:20:21.11:125,21,0	0/0:17,0:17:36.12:0,36,501	0/0:8,0:8:24.08:0,24,334	0/1:12,7:22:13.16:162,0,13	0/1:8,0:9:2.26:8,0,2	1/1:10,0:15:17.25:89,17,0	1/1:11,0:15:13.01:58,13,0	0/1:6,6:12:17.78:161,0,18	1/1:7,14:21:17.96:163,18,0	1/1:3,4:8:11.85:99,12,0	0/0:2,0:19:2.66:0,3,22	0/0:15,0:15:45.14:0,45,612	0/0:3,0:11:3.09:0,3,10	0/1:10,5:15:4.76:129,0,5	1/1:3,0:17:19.91:86,20,0	1/1:8,1:14:15.43:94,15,0	1/1:7,0:10:11.34:59,11,0	1/1:8,8:18:24.76:249,25,0	1/1:11,11:22:21.31:347,21,0	1/1:0,3:3:9.01:87,9,0	1/1:7,10:18:10.24:247,10,0	1/1:13,0:15:6.63:45,7,0	1/1:13,0:20:19.01:93,19,0	1/1:1,0:5:11.47:59,11,0
chr10	92724049	.	AGGAGAGGAGG	A	3843.69	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-0.873;DP=333;FS=9.363;HRun=0;HaplotypeScore=87.1046;InbreedingCoeff=0.8524;MQ=75.10;MQ0=35;MQRankSum=-1.627;QD=20.23;ReadPosRankSum=0.661;VQSLOD=1.6687;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:29.86:0,30,703	1/1:4,0:3:9:80,9,0	0/0:35,0:19:10.02:0,10,344	0/0:62,0:24:35.72:0,36,394	1/1:11,1:10:21:203,21,0	0/0:9,0:8:21.03:0,21,529	0/0:16,0:12:32.88:0,33,591	1/1:9,0:8:20.99:183,21,0	1/1:5,0:5:11.97:100,12,0	1/1:10,0:9:14.36:134,14,0	1/1:5,1:5:11.05:92,11,0	1/1:5,1:4:9.01:147,9,0	1/1:3,0:2:5.91:38,6,0	1/1:4,0:4:11.94:97,12,0	1/1:8,1:7:20.95:180,21,0	0/0:5,0:5:9:0,9,77	1/1:11,0:10:17.26:143,17,0	1/1:9,0:9:17.82:134,18,0	1/1:4,3:3:5.98:117,6,0	1/1:10,1:10:26.97:300,27,0	1/1:19,0:15:26.64:339,27,0	1/1:11,1:12:24.47:272,24,0	1/1:8,3:10:23.92:321,24,0	1/1:17,1:15:28.37:308,28,0	1/1:9,1:10:20.73:174,21,0	1/1:5,0:3:8.95:73,9,0	1/1:5,2:6:17.98:333,18,0	1/1:2,0:2:6.01:75,6,0
chr10	92724106	.	AT	A	12182.31	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.558;DP=357;FS=13.938;HRun=1;HaplotypeScore=51.5429;InbreedingCoeff=0.9143;MQ=81.02;MQ0=0;MQRankSum=-6.688;QD=38.07;ReadPosRankSum=5.102;VQSLOD=3.6820;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:22:57.19:797,57,0	1/1:0,4:4:12.04:163,12,0	0/0:18,1:19:54.08:0,54,766	0/0:18,0:15:37.06:0,37,520	1/1:0,17:17:45.07:586,45,0	1/1:0,13:13:39.13:545,39,0	1/1:0,12:12:33.11:461,33,0	1/1:0,13:13:36.11:484,36,0	1/1:0,10:10:30.10:419,30,0	1/1:0,9:9:27.09:378,27,0	1/1:0,10:10:24.08:335,24,0	1/1:0,6:6:18.06:251,18,0	1/1:0,17:17:48.13:650,48,0	1/1:0,10:10:30.10:418,30,0	1/1:0,17:16:48.16:670,48,0	1/1:0,7:7:17.95:252,18,0	1/1:0,18:18:54.14:732,54,0	1/1:1,5:6:8.95:201,9,0	1/1:0,3:3:9.03:126,9,0	1/1:0,19:19:54.18:755,54,0	1/1:0,14:14:36.08:482,36,0	1/1:0,16:16:39.13:545,39,0	1/1:0,18:18:45.12:630,45,0	1/1:0,15:15:39.11:545,39,0	1/1:0,6:6:18.06:252,18,0	1/1:0,11:11:33.11:462,33,0	1/1:0,18:18:51.17:708,51,0	1/1:0,8:8:24.08:336,24,0
chr10	92724242	.	A	ATT	3507.54	PASS	AB=0.786;AC=16;AF=0.286;AN=56;BaseQRankSum=-4.001;DP=478;FS=6.313;HRun=0;HaplotypeScore=55.2806;InbreedingCoeff=0.8561;MQ=57.44;MQ0=35;MQRankSum=4.331;QD=32.48;ReadPosRankSum=3.007;VQSLOD=5.7027;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:12:27.09:0,27,413	0/0:5,0:5:14.55:0,15,104	0/0:61,0:21:59.75:0,60,810	0/0:73,0:14:30.20:0,30,423	0/0:12,0:9:21.05:0,21,298	0/0:21,0:21:51.16:0,51,757	0/0:22,0:21:42.27:0,42,593	1/1:3,25:28:75.25:1173,75,0	0/0:14,0:14:39.02:0,39,574	0/0:11,0:11:33.11:0,33,493	0/0:12,0:12:24.06:0,24,328	1/1:6,0:6:17.99:262,18,0	1/1:13,0:12:32.78:492,33,0	1/1:6,0:6:9.03:146,9,0	0/0:16,0:13:29.45:0,29,238	0/0:19,0:17:39.09:0,39,523	0/0:16,0:15:33.96:0,34,243	1/1:4,0:4:9.50:148,10,0	0/0:12,0:11:28.65:0,29,404	0/0:11,0:10:24.55:0,25,367	0/0:19,0:17:42.14:0,42,639	1/1:2,5:6:6.02:74,6,0	0/1:2,6:7:0.03:0,0,0	1/1:24,0:24:3.96:913,4,0	0/1:12,0:11:0.21:300,0,0	0/0:9,0:8:20.90:0,21,299	0/0:10,0:10:25.87:0,26,312	0/0:11,0:11:30.09:0,30,435
chr10	92725216	.	T	TA	18381.08	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-4.001;DP=645;FS=18.364;HRun=4;HaplotypeScore=70.8912;InbreedingCoeff=0.9994;MQ=83.86;MQ0=0;MQRankSum=-5.884;QD=36.62;ReadPosRankSum=2.260;VQSLOD=3.0670;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.16:0,57,647	1/1:1,11:12:30.10:410,30,0	0/0:17,0:17:43.63:0,44,465	0/0:22,0:22:66.05:0,66,723	1/1:5,22:27:66.22:899,66,0	0/0:42,0:42:99:0,126,1398	0/0:17,0:17:39.09:0,39,432	1/1:2,39:41:99:1582,117,0	1/1:0,16:16:45.15:616,45,0	1/1:1,24:25:75.25:1022,75,0	1/1:2,24:26:72.20:964,72,0	1/1:0,21:21:60.20:821,60,0	1/1:1,23:24:66.22:903,66,0	1/1:2,20:22:60.20:821,60,0	1/1:0,20:20:60.20:821,60,0	0/0:25,0:25:75.20:0,75,840	1/1:1,14:15:39.13:533,39,0	1/1:3,14:17:39.08:512,39,0	1/1:5,24:29:72.22:967,72,0	1/1:6,31:37:87.29:1190,87,0	1/1:2,29:31:84.28:1149,84,0	1/1:1,17:18:48.16:657,48,0	1/1:1,22:23:60.20:821,60,0	1/1:0,17:17:48.16:657,48,0	1/1:0,23:23:69.23:944,69,0	1/1:2,21:23:63.21:862,63,0	1/1:1,23:24:66.22:903,66,0	1/1:1,10:11:24.08:328,24,0
chr10	92725798	.	G	GC	3112.39	PASS	AB=0.750;AC=21;AF=0.375;AN=56;BaseQRankSum=3.389;DP=850;FS=2.492;HRun=0;HaplotypeScore=310.3323;InbreedingCoeff=-0.6052;MQ=56.30;MQ0=19;MQRankSum=-5.517;QD=5.61;ReadPosRankSum=-2.180;VQSLOD=2.6918;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:51:99:0,138,1906	0/1:3,8:11:33.24:86,0,33	0/0:70,0:37:72.27:0,72,1061	0/0:77,0:31:49.35:0,49,601	0/1:19,10:29:46.03:46,0,267	0/0:30,0:30:90.30:0,90,1258	0/0:17,0:17:51.15:0,51,693	0/1:31,10:41:99:403,0,898	0/1:15,8:23:25.75:26,0,206	0/1:15,8:24:99:395,0,471	0/1:17,11:28:73.90:74,0,185	0/1:23,12:34:99:120,0,364	0/1:22,13:33:99:235,0,360	0/1:25,7:32:9.42:9,0,387	0/1:24,15:39:99:114,0,179	0/0:25,0:25:66.05:0,66,893	0/1:19,5:24:45.78:46,0,538	0/1:9,3:10:99:119,0,134	0/1:11,5:11:99:165,0,163	0/1:13,12:25:68.23:68,0,263	0/1:21,4:24:48.84:49,0,228	0/1:14,11:25:29.40:29,0,184	0/1:29,9:37:75.79:76,0,266	0/0:17,7:23:5.41:0,5,84	0/1:21,9:30:99:119,0,186	0/1:14,14:28:99:585,0,473	0/1:13,13:25:99:482,0,328	0/1:7,1:8:26.77:27,0,231
chr10	92725804	.	G	GC	1647.64	PASS	AB=0.784;AC=17;AF=0.304;AN=56;BaseQRankSum=6.099;DP=816;FS=5.819;HRun=0;HaplotypeScore=300.8006;InbreedingCoeff=-0.4011;MQ=55.69;MQ0=17;MQRankSum=-8.442;QD=3.86;ReadPosRankSum=-1.052;VQSLOD=2.5600;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:53:99:0,150,2047	0/1:3,8:11:30.75:71,0,31	0/0:56,0:33:62.21:0,62,814	0/0:69,0:31:62.36:0,62,702	0/0:17,9:26:20.70:0,21,271	0/0:31,0:31:93.31:0,93,1299	0/0:20,0:20:54.18:0,54,745	0/1:29,4:33:81.57:82,0,648	0/0:14,7:21:19:0,19,242	0/1:15,7:22:99:255,0,432	0/1:18,10:28:25.11:25,0,184	0/1:22,8:30:0.49:0,0,218	0/1:22,11:31:99:176,0,168	0/0:26,6:32:46.43:0,46,299	0/1:27,13:40:5.02:5,0,200	0/0:26,0:26:72.10:0,72,957	0/1:20,5:25:39.03:39,0,419	0/1:8,2:9:63.81:64,0,142	0/1:12,2:9:59.88:60,0,243	0/1:15,11:26:17.39:17,0,261	0/1:23,2:24:2.56:3,0,228	0/0:16,10:26:14.48:0,14,127	0/1:28,8:35:37.26:37,0,172	0/0:18,3:22:10.97:0,11,68	0/1:22,8:30:45.99:46,0,108	0/1:16,14:30:99:546,0,463	0/1:15,10:23:99:351,0,307	0/1:6,1:7:23.31:23,0,213
chr10	92725806	.	A	AAG	8370.27	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=5.599;DP=814;FS=29.854;HRun=0;HaplotypeScore=288.4266;InbreedingCoeff=0.6544;MQ=54.74;MQ0=15;MQRankSum=-5.599;QD=15.03;ReadPosRankSum=-2.147;VQSLOD=3.2427;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:55:78.21:0,78,1442	1/1:11,0:11:6.02:66,6,0	0/0:54,0:31:49.98:0,50,540	0/0:70,0:32:20.02:0,20,304	1/1:26,0:26:26.78:241,27,0	0/0:31,0:31:84.16:0,84,1003	0/0:20,0:20:51.13:0,51,616	1/1:11,21:34:70.37:998,70,0	0/1:21,0:21:11.18:166,0,11	0/1:22,0:22:10.42:249,0,10	1/1:27,0:27:26.63:250,27,0	1/1:12,21:33:50.91:765,51,0	1/1:12,21:31:46.56:705,47,0	1/1:8,24:32:59.86:770,60,0	1/1:39,0:39:57.12:621,57,0	0/0:26,0:26:69.12:0,69,834	1/1:25,0:25:39.53:435,40,0	1/1:8,3:9:14.92:214,15,0	1/1:14,0:9:0.13:150,0,0	1/1:25,0:25:29.31:274,29,0	0/1:25,0:24:1.71:156,0,2	1/1:12,15:27:22.64:309,23,0	1/1:12,25:36:43.20:583,43,0	1/1:9,13:22:14.74:212,15,0	1/1:10,19:29:38.58:505,39,0	1/1:31,0:31:24.43:338,24,0	1/1:25,0:23:22.75:246,23,0	0/1:7,0:7:3.85:117,0,4
chr10	92725810	.	G	GAA	4471.09	PASS	AB=0.985;AC=29;AF=0.518;AN=56;BaseQRankSum=9.528;DP=811;FS=6.831;HRun=1;HaplotypeScore=299.0669;InbreedingCoeff=0.1431;MQ=53.94;MQ0=13;MQRankSum=-5.228;QD=8.45;ReadPosRankSum=0.525;VQSLOD=0.8167;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,141,1964	0/1:9,3:12:9.96:105,0,10	0/0:52,0:31:53.82:0,54,828	0/0:64,0:31:39.99:0,40,538	1/1:27,0:27:11.99:50,12,0	0/0:31,0:31:90.27:0,90,1313	0/0:20,0:20:57.15:0,57,823	0/1:33,0:33:5.03:327,0,5	0/1:21,0:21:31.10:31,0,71	0/1:23,0:23:15.69:16,0,203	0/1:27,0:27:0.24:50,0,0	1/1:32,0:31:28.51:392,29,0	1/1:32,0:30:1.45:356,1,0	1/1:32,0:32:33.59:371,34,0	1/1:13,26:39:71.36:1119,71,0	0/0:26,0:26:75.22:0,75,1085	1/1:7,17:24:9.86:746,10,0	0/1:12,0:10:46.96:91,0,47	0/1:15,0:10:20.58:21,0,81	0/1:28,0:28:3.50:50,0,3	0/1:25,0:24:15.77:16,0,39	1/1:26,0:26:7.26:138,7,0	0/1:38,0:37:4.78:239,0,5	0/1:22,0:22:3.34:98,0,3	1/1:29,0:29:17.46:226,17,0	0/0:31,0:31:11.97:0,12,306	0/1:25,0:23:20.29:20,0,108	0/1:7,0:7:9.56:10,0,45
chr10	92727964	.	GA	G	18049.23	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=15.786;DP=638;FS=2.869;HRun=1;HaplotypeScore=120.3860;InbreedingCoeff=0.9938;MQ=93.25;MQ0=0;MQRankSum=-6.659;QD=38.48;ReadPosRankSum=4.484;VQSLOD=4.5584;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,2055	1/1:0,8:8:18.06:252,18,0	0/0:22,0:22:66.03:0,66,993	0/0:33,0:33:82.80:0,83,1336	1/1:0,18:18:48.16:671,48,0	0/0:15,0:15:45.15:0,45,713	0/0:24,0:24:72.20:0,72,1075	1/1:0,30:30:90.30:1258,90,0	1/1:0,29:29:81.27:1131,81,0	1/1:0,23:23:63.20:881,63,0	1/1:0,9:9:21.07:294,21,0	1/1:0,30:30:84.28:1174,84,0	1/1:0,24:24:60.20:837,60,0	1/1:0,22:22:63.21:881,63,0	1/1:0,36:36:99:1510,108,0	0/0:31,0:31:93.32:0,93,1479	1/1:0,35:35:99:1426,102,0	1/1:0,19:19:51.17:713,51,0	1/1:0,14:14:42.14:584,42,0	1/1:0,9:9:24.08:336,24,0	1/1:0,55:55:99:1972,141,0	1/1:0,18:18:48.16:671,48,0	1/1:1,14:15:42.14:574,42,0	1/1:1,24:25:66.22:913,66,0	1/1:0,12:12:33.11:462,33,0	1/1:0,11:11:33.11:462,33,0	1/1:1,21:22:60.20:839,60,0	1/1:0,5:5:15.05:210,15,0
chr10	92728269	.	A	AG	2678.45	PASS	AB=0.648;AC=16;AF=0.286;AN=56;BaseQRankSum=-8.010;DP=562;FS=0.898;HRun=9;HaplotypeScore=69.7356;InbreedingCoeff=0.8285;MQ=70.04;MQ0=0;MQRankSum=0.039;QD=16.04;ReadPosRankSum=-0.724;VQSLOD=3.6827;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:20:37.47:0,37,116	0/0:10,0:10:26.99:0,27,234	0/0:16,0:15:22.81:0,23,169	0/0:13,0:12:21.09:0,21,144	0/0:30,0:30:59.63:0,60,518	0/0:2,0:21:39.61:0,40,126	0/0:3,0:15:20.37:0,20,60	1/1:5,9:16:27.02:279,27,0	0/0:22,0:22:44.96:0,45,391	0/0:28,0:28:68.93:0,69,589	0/0:29,0:29:80.86:0,81,687	1/1:6,11:17:4.06:273,4,0	1/1:4,11:16:14.08:190,14,0	1/1:5,12:17:24.06:265,24,0	0/0:24,0:24:62.96:0,63,541	0/0:2,0:20:37.63:0,38,128	0/0:23,0:23:60.84:0,61,517	1/1:3,16:19:45.12:498,45,0	0/0:27,0:27:62.96:0,63,542	0/0:29,0:29:71.90:0,72,611	0/0:8,0:8:24:0,24,208	0/1:8,9:17:1.99:208,0,2	1/1:8,14:22:39.11:431,39,0	1/1:2,14:16:36.10:398,36,0	0/1:12,15:27:55.85:332,0,56	0/0:26,0:26:50.95:0,51,438	0/0:18,0:18:44.99:0,45,390	0/0:16,0:16:44.94:0,45,383
chr10	92728883	.	GTAAAACACTGC	G	1939.92	PASS	AB=0.901;AC=4;AF=0.071;AN=56;BaseQRankSum=6.539;DP=594;FS=5.049;HRun=0;HaplotypeScore=220.8385;InbreedingCoeff=-0.0864;MQ=88.96;MQ0=0;MQRankSum=-6.943;QD=23.09;ReadPosRankSum=-0.026;VQSLOD=2.5757;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,154,8217	0/0:12,0:12:36.12:0,36,1789	0/0:19,0:19:57.20:0,57,2732	0/0:30,0:29:81.28:0,81,3780	0/0:23,0:23:66.21:0,66,3300	0/0:19,0:19:57.17:0,57,2868	0/0:13,0:13:39.13:0,39,2166	0/1:10,19:29:99:1705,0,287	0/0:23,0:23:69.22:0,69,3753	0/0:26,0:26:78.26:0,78,4300	0/0:23,0:23:66.70:0,67,3823	0/0:17,0:17:15.22:0,15,1061	0/1:15,0:15:45.41:45,0,391	0/1:29,0:29:94.06:94,0,1104	0/0:28,0:28:81.28:0,81,4558	0/0:17,0:17:51.18:0,51,2878	0/0:19,0:19:54.19:0,54,2906	0/0:11,0:11:15.05:0,15,470	0/0:21,0:21:63.21:0,63,3109	0/0:24,0:24:72.23:0,72,3810	0/0:43,0:43:99:0,129,7062	0/0:12,0:12:9:0,9,212	0/1:11,0:11:99:205,0,244	0/0:10,0:10:9.03:0,9,322	0/0:14,0:14:11.97:0,12,355	0/0:29,0:29:81.28:0,81,4443	0/0:22,0:22:63.22:0,63,3654	0/0:3,0:3:9.03:0,9,525
chr10	92728884	.	T	TGATAGCATGCTGCCAG	20752.35	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=9.676;DP=681;FS=1.617;HRun=0;HaplotypeScore=307.8996;InbreedingCoeff=0.9847;MQ=84.11;MQ0=0;MQRankSum=-16.557;QD=87.93;ReadPosRankSum=2.819;VQSLOD=4.2313;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,147,6307	0/0:12,0:12:36.11:0,36,1399	0/0:21,0:21:57.15:0,57,1855	0/0:28,0:27:81.28:0,81,3167	0/0:23,0:23:66.21:0,66,2692	0/0:19,0:19:57.16:0,57,2160	0/0:13,0:13:39.13:0,39,1772	1/1:45,0:45:99:4684,126,0	0/0:23,0:23:69.22:0,69,3131	0/0:27,0:27:78.25:0,78,3296	0/0:24,0:24:66.23:0,66,3125	1/1:11,2:26:57.03:3123,57,0	1/1:10,5:27:42.13:2700,42,0	1/1:10,9:36:63.21:3712,63,0	0/0:28,0:28:81.26:0,81,3509	0/0:17,0:17:51.18:0,51,2357	0/0:18,0:18:54.17:0,54,2381	1/1:4,3:14:27.08:1731,27,0	0/0:21,0:21:63.21:0,63,2275	0/0:24,0:24:69.22:0,69,2955	0/0:43,0:43:99:0,126,5685	1/1:10,7:24:18.06:1096,18,0	1/1:17,2:28:27.09:1390,27,0	1/1:7,1:17:15.73:1271,16,0	1/1:5,8:19:15.05:1045,15,0	0/0:27,0:27:78.27:0,78,3538	0/0:22,0:22:63.22:0,63,2981	0/0:3,0:3:9.03:0,9,346
chr10	92731809	.	T	TA	10115.82	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=5.389;DP=580;FS=2.225;HRun=6;HaplotypeScore=88.1830;InbreedingCoeff=0.9920;MQ=72.36;MQ0=0;MQRankSum=-2.909;QD=22.53;ReadPosRankSum=1.284;VQSLOD=3.9651;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,129,1299	1/1:0,16:16:33.02:394,33,0	0/0:8,0:8:24.04:0,24,231	0/0:23,0:22:51.11:0,51,520	1/1:5,1:39:99:510,100,0	0/0:21,0:21:60.11:0,60,600	0/0:13,0:13:36.08:0,36,367	1/1:0,30:30:90.25:1093,90,0	1/1:0,0:15:37.16:205,37,0	1/1:2,0:18:43.61:260,44,0	1/1:3,1:24:57.70:321,58,0	1/1:2,15:17:36.12:453,36,0	1/1:3,21:24:51.16:642,51,0	1/1:0,17:17:45.14:566,45,0	1/1:0,22:21:54.17:679,54,0	0/0:20,0:20:60.14:0,60,612	1/1:2,30:32:87.28:1094,87,0	1/1:1,16:17:45.14:566,45,0	1/1:1,0:20:54.46:274,54,0	1/1:5,1:17:34.28:180,34,0	1/1:0,0:16:45.41:231,45,0	1/1:0,10:10:27:319,27,0	1/1:2,20:22:57.18:717,57,0	1/1:4,14:18:39.12:491,39,0	1/1:6,14:20:36.12:453,36,0	1/1:5,0:28:66.02:334,66,0	1/1:3,0:23:54.01:275,54,0	1/1:0,0:4:11.36:58,11,0
chr10	92732150	.	TA	T	12307.64	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=11.303;DP=665;FS=4.530;HRun=8;HaplotypeScore=63.3291;InbreedingCoeff=0.9509;MQ=67.24;MQ0=0;MQRankSum=-1.827;QD=23.67;ReadPosRankSum=3.753;VQSLOD=5.6347;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,99,1181	1/1:1,10:11:27.04:260,27,0	0/0:18,0:17:39.03:0,39,443	0/0:15,1:16:1.43:0,1,294	1/1:4,23:27:69.10:666,69,0	0/0:28,0:28:81.24:0,81,965	0/0:16,0:16:45.14:0,45,543	1/1:7,28:35:84.12:809,84,0	1/1:1,21:21:51.08:493,51,0	1/1:1,26:27:78.13:753,78,0	1/1:0,25:25:69.11:665,69,0	1/1:2,24:26:60.09:579,60,0	1/1:3,25:28:60.09:579,60,0	1/1:0,15:15:36.06:348,36,0	1/1:7,29:36:75.11:724,75,0	0/0:28,0:28:66.20:0,66,788	1/1:0,21:21:57.09:551,57,0	1/1:4,11:15:33.05:319,33,0	1/1:6,22:28:63.08:608,63,0	1/1:4,24:28:72.11:694,72,0	1/1:2,15:17:39.06:377,39,0	1/1:0,19:19:57.09:550,57,0	1/1:3,24:27:66.10:637,66,0	1/1:2,19:21:42.06:406,42,0	1/1:2,20:22:57.09:550,57,0	1/1:2,23:25:69.11:666,69,0	1/1:5,34:39:96.15:927,96,0	1/1:0,6:6:14.99:145,15,0
chr10	92733143	.	CATCCAGTCTCCAATCCCATCCAGTCACCAATCT	C	5846.94	PASS	AB=1.000;AC=35;AF=0.673;AN=52;BaseQRankSum=-2.060;DP=578;FS=0.000;HRun=0;HaplotypeScore=271.6651;InbreedingCoeff=0.5422;MQ=44.71;MQ0=64;MQRankSum=0.647;QD=17.05;ReadPosRankSum=4.776;VQSLOD=3.0833;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:30:78.04:0,78,1863	0/1:10,0:8:6.30:137,0,6	0/0:45,0:8:17.34:0,17,569	0/0:61,0:18:51.04:0,51,1076	./.	0/0:15,0:15:24.08:0,24,694	0/0:26,0:26:50.93:0,51,1133	1/1:19,0:18:41.97:394,42,0	1/1:21,0:15:4.04:114,4,0	0/1:19,0:15:2.98:337,0,3	1/1:3,6:9:3.65:28,4,0	1/1:17,0:13:29.88:357,30,0	1/1:21,0:21:29.71:291,30,0	1/1:22,0:20:17.99:281,18,0	1/1:16,0:15:35.87:350,36,0	0/0:22,0:22:57.12:0,57,1558	1/1:25,0:24:44.91:527,45,0	1/1:10,0:9:18.05:425,18,0	1/1:13,9:8:23.86:282,24,0	1/1:10,0:6:2.12:18,2,0	1/1:31,0:24:44.10:773,44,0	./.	0/1:11,0:9:10.06:40,0,10	0/1:30,0:28:6.43:586,0,6	1/1:10,0:10:17.11:334,17,0	0/1:12,0:8:11:65,0,11	1/1:21,0:17:32.90:437,33,0	1/1:7,0:7:8.98:72,9,0
chr10	92733648	.	TC	T	1899.79	PASS	AB=0.932;AC=9;AF=0.161;AN=56;BaseQRankSum=-9.841;DP=1030;FS=2.360;HRun=3;HaplotypeScore=137.0804;InbreedingCoeff=0.6490;MQ=44.85;MQ0=186;MQRankSum=3.063;QD=9.79;ReadPosRankSum=1.786;VQSLOD=1.4817;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:41,10:41:99:220,0,871	0/0:21,0:19:49.18:0,49,632	0/1:55,0:6:2.13:2,0,6	0/0:36,1:2:3.01:0,3,43	0/0:26,0:17:48.11:0,48,646	1/1:7,11:17:21.44:449,21,0	1/1:0,22:22:60.19:742,60,0	0/0:40,0:15:42.13:0,42,589	0/0:60,1:56:62.15:0,62,1314	0/0:55,0:26:78.20:0,78,1034	0/0:33,0:19:51.13:0,51,710	0/0:35,0:31:69.13:0,69,887	0/0:22,0:19:48.12:0,48,667	0/0:40,0:37:84.27:0,84,1178	0/0:39,0:39:79.66:0,80,1144	1/1:1,22:20:51.16:632,51,0	0/0:42,3:41:75.73:0,76,1479	0/0:27,0:23:57.19:0,57,820	0/0:28,0:7:18.06:0,18,257	0/0:34,0:21:51.07:0,51,668	0/0:85,0:59:99:0,112,1542	0/0:24,0:21:51.13:0,51,691	0/0:19,0:12:24.07:0,24,326	0/0:43,1:41:90.30:0,90,1294	0/0:36,0:32:81.06:0,81,1012	0/0:34,1:15:45.15:0,45,648	0/0:50,0:40:80.86:0,81,1163	0/1:23,1:19:4.02:4,0,376
chr10	92734305	.	CT	C	1398.18	PASS	AB=0.913;AC=7;AF=0.125;AN=56;BaseQRankSum=7.999;DP=584;FS=0.478;HRun=10;HaplotypeScore=60.0549;InbreedingCoeff=0.7796;MQ=70.90;MQ0=0;MQRankSum=-1.140;QD=15.36;ReadPosRankSum=3.662;VQSLOD=3.9214;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:51.97:0,52,549	0/0:6,0:6:18.05:0,18,199	0/0:16,1:16:3.68:0,4,202	0/0:7,0:6:6:0,6,58	0/0:28,0:30:83.87:0,84,874	1/1:4,21:25:53.97:469,54,0	1/1:2,21:23:62.99:547,63,0	0/0:21,1:22:39.09:0,39,416	0/0:16,1:17:13.04:0,13,364	0/0:20,0:20:48.13:0,48,531	0/0:21,1:22:35.35:0,35,605	0/0:13,0:13:30.08:0,30,332	0/0:22,1:23:25.97:0,26,507	0/0:18,0:18:42.11:0,42,465	0/0:33,0:33:90.22:0,90,980	1/1:1,21:22:59.99:521,60,0	0/0:34,0:34:86.51:0,87,918	0/0:21,0:21:60.11:0,60,649	0/0:16,0:18:47.80:0,48,493	0/0:31,0:31:82.08:0,82,882	0/0:12,0:12:30.08:0,30,332	0/0:21,0:21:48.13:0,48,531	0/0:25,1:26:46.11:0,46,721	0/0:13,0:13:33.07:0,33,351	0/1:19,2:21:7:7,0,378	0/0:29,0:29:78.20:0,78,856	0/0:21,2:23:34.04:0,34,573	0/0:13,0:13:18.03:0,18,188
chr10	92734441	.	GA	G	8695.64	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=8.979;DP=529;FS=11.778;HRun=10;HaplotypeScore=55.4126;InbreedingCoeff=0.9629;MQ=75.46;MQ0=0;MQRankSum=-0.961;QD=20.90;ReadPosRankSum=1.548;VQSLOD=5.1839;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.13:0,48,531	1/1:4,8:12:20.98:182,21,0	0/0:19,0:15:20.19:0,20,221	0/0:12,0:10:6.01:0,6,64	1/1:3,22:25:59.98:520,60,0	0/0:21,0:22:66:0,66,704	0/0:21,0:21:54.15:0,54,597	1/1:2,21:23:62.95:539,63,0	1/1:1,10:11:26.99:234,27,0	1/1:3,11:14:33.44:282,33,0	1/1:1,11:12:32.98:286,33,0	1/1:2,15:17:50.36:422,50,0	1/1:1,18:19:44.99:391,45,0	1/1:2,14:16:38.99:337,39,0	1/1:3,18:22:50.01:423,50,0	0/0:18,0:19:47.95:0,48,504	1/1:2,17:19:47.99:417,48,0	1/1:1,17:18:38.97:338,39,0	1/1:6,13:19:8.79:301,9,0	1/1:2,27:29:77.93:668,78,0	1/1:1,26:27:68.99:599,69,0	1/1:2,9:11:26.99:234,27,0	1/1:3,23:26:59.98:521,60,0	1/1:0,16:16:41.99:364,42,0	1/1:3,10:13:20.99:182,21,0	1/1:3,24:27:68.96:596,69,0	1/1:3,25:28:68.97:599,69,0	1/1:0,12:12:29.99:260,30,0
chr10	92735951	.	AAAAAAAAC	A	4822.72	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=0.411;DP=590;FS=19.363;HRun=0;HaplotypeScore=180.8127;InbreedingCoeff=0.4037;MQ=69.90;MQ0=7;MQRankSum=-4.638;QD=11.51;ReadPosRankSum=-2.823;VQSLOD=2.2932;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:40:99:0,114,3313	0/1:9,0:9:11.24:175,0,11	0/0:40,0:19:41.89:0,42,532	0/0:26,0:17:23.75:0,24,500	1/1:24,1:24:35.34:397,35,0	0/0:26,0:26:75.24:0,75,2487	0/0:17,0:17:34.25:0,34,1102	0/1:19,0:19:22.81:23,0,88	1/1:16,0:16:20.34:393,20,0	1/1:22,0:22:49.41:530,49,0	1/1:14,1:15:33.29:470,33,0	1/1:14,0:14:7.49:112,7,0	0/1:15,0:15:27.01:74,0,27	0/1:20,0:19:48.23:99,0,48	1/1:33,0:33:18.04:201,18,0	0/0:21,0:21:41.50:0,41,1602	1/1:17,0:17:31.68:227,32,0	0/1:20,0:19:59.65:60,0,180	1/1:29,0:28:46.78:327,47,0	1/1:19,2:21:56.26:630,56,0	1/1:9,0:9:8.66:77,9,0	0/1:22,0:22:80.79:114,0,81	1/1:21,0:21:10.44:45,10,0	0/1:25,0:24:8.28:39,0,8	1/1:26,0:26:5.61:218,6,0	1/1:15,0:15:34.90:302,35,0	1/1:17,0:17:30.42:231,30,0	1/1:7,0:7:6.01:78,6,0
chr10	92735952	.	AAAAAAAC	A	7629.29	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-1.785;DP=603;FS=7.742;HRun=0;HaplotypeScore=166.6297;InbreedingCoeff=0.6923;MQ=68.88;MQ0=7;MQRankSum=-2.391;QD=17.66;ReadPosRankSum=-5.636;VQSLOD=1.6836;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,2819	1/1:9,0:9:2.43:184,2,0	0/0:40,0:19:40.85:0,41,470	0/0:26,0:16:19.21:0,19,410	1/1:26,2:27:69.85:665,70,0	0/0:27,0:27:78.05:0,78,2173	0/0:17,0:17:34.21:0,34,955	0/1:19,0:19:12.85:134,0,13	1/1:13,4:17:26.60:526,27,0	1/1:5,17:22:51.99:710,52,0	1/1:13,3:16:41.50:516,41,0	1/1:13,1:14:28.26:236,28,0	1/1:15,0:15:14.34:175,14,0	1/1:20,0:19:23.09:214,23,0	1/1:32,1:33:18.06:287,18,0	0/0:21,0:21:40.79:0,41,1374	1/1:16,1:17:43.57:405,44,0	0/1:20,0:19:72.44:146,0,72	1/1:30,0:27:66.03:483,66,0	1/1:18,4:22:59.89:739,60,0	1/1:2,7:9:8.86:112,9,0	0/1:22,0:22:3.15:242,0,3	1/1:21,0:21:11.89:101,12,0	1/1:25,0:24:35.97:187,36,0	1/1:26,0:26:56.74:452,57,0	1/1:20,1:21:53.98:588,54,0	1/1:17,2:19:45:420,45,0	1/1:3,4:7:6.02:106,6,0
chr10	92735953	.	AAAAAAC	A	8999.62	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=-2.676;DP=603;FS=3.388;HRun=0;HaplotypeScore=152.3481;InbreedingCoeff=0.8553;MQ=68.13;MQ0=7;MQRankSum=-4.412;QD=20.83;ReadPosRankSum=-6.841;VQSLOD=2.8270;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,2351	1/1:9,1:10:17.62:244,18,0	0/0:39,0:18:40.88:0,41,380	0/0:26,0:16:24.34:0,24,325	1/1:28,0:27:73.21:664,73,0	0/0:28,0:28:80.96:0,81,1867	0/0:17,0:17:33.80:0,34,810	1/1:18,0:18:10.36:255,10,0	1/1:14,3:17:26.69:515,27,0	1/1:21,1:22:52:632,52,0	1/1:15,1:16:41.99:500,42,0	1/1:15,0:15:37.82:330,38,0	1/1:15,0:15:36.33:288,36,0	1/1:19,1:19:44.17:384,44,0	1/1:4,29:33:18.06:353,18,0	0/0:21,0:21:40.55:0,41,1146	1/1:14,4:18:47.51:502,48,0	0/1:20,0:19:18.52:192,0,19	1/1:30,0:27:67.39:512,67,0	1/1:23,0:23:62.95:706,63,0	1/1:7,1:8:8.79:83,9,0	1/1:19,2:21:31.83:457,32,0	1/1:20,0:20:12.46:157,12,0	1/1:24,1:24:49.60:379,50,0	1/1:24,2:26:70.59:675,71,0	1/1:19,2:21:56.99:639,57,0	1/1:19,0:19:47.78:432,48,0	1/1:7,0:7:6.02:99,6,0
chr10	92735954	.	AAAAAC	A	9571.17	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-2.854;DP=610;FS=2.226;HRun=0;HaplotypeScore=142.9842;InbreedingCoeff=0.9540;MQ=68.01;MQ0=7;MQRankSum=-3.264;QD=21.90;ReadPosRankSum=-7.801;VQSLOD=3.0629;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1929	1/1:10,1:11:25.97:264,26,0	0/0:39,0:18:33.77:0,34,289	0/0:26,0:16:20.14:0,20,280	1/1:27,0:26:74.40:662,74,0	0/0:28,0:28:80.88:0,81,1549	0/0:17,0:17:33.74:0,34,667	1/1:18,1:19:28.95:300,29,0	1/1:17,0:17:30.72:476,31,0	1/1:21,1:22:52.37:597,52,0	1/1:17,0:17:44.98:482,45,0	1/1:15,1:16:41.93:401,42,0	1/1:14,1:15:38.77:326,39,0	1/1:18,2:19:51.62:482,52,0	1/1:32,1:33:18.06:276,18,0	0/0:23,0:23:46.32:0,46,982	1/1:18,0:18:47.56:464,48,0	1/1:20,0:19:13.51:293,14,0	1/1:30,0:27:68.38:532,68,0	1/1:23,0:23:62.95:682,63,0	1/1:8,0:8:8.71:74,9,0	1/1:19,3:22:53.58:594,54,0	1/1:2,18:20:12.57:220,13,0	1/1:24,1:24:55.35:502,55,0	1/1:22,4:26:77.54:809,78,0	1/1:20,1:21:57:590,57,0	1/1:20,0:20:50.90:465,51,0	1/1:7,0:7:6.02:80,6,0
chr10	92735958	.	AC	A	8289.31	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-1.376;DP=601;FS=5.708;HRun=1;HaplotypeScore=109.7561;InbreedingCoeff=0.8822;MQ=67.00;MQ0=7;MQRankSum=-4.415;QD=18.30;ReadPosRankSum=-7.207;VQSLOD=2.5660;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:38,1:39:43.45:0,43,693	1/1:10,1:11:26.79:198,27,0	0/0:39,0:18:9.01:0,9,203	0/1:24,0:14:1.64:2,0,88	1/1:29,0:28:81.18:664,81,0	0/0:30,0:30:72.45:0,72,645	0/0:17,0:17:32.71:0,33,271	1/1:18,0:18:41.52:313,42,0	1/1:18,0:18:28.99:370,29,0	1/1:19,0:20:50.10:347,50,0	1/1:14,1:15:44.63:338,45,0	1/1:16,0:16:47.83:399,48,0	1/1:14,0:14:41.81:338,42,0	1/1:22,0:21:58.43:481,58,0	1/1:31,0:31:17.79:117,18,0	0/0:23,0:23:36.41:0,36,419	1/1:17,0:17:47.79:383,48,0	1/1:21,0:20:56.27:439,56,0	1/1:4,26:27:77.59:615,78,0	1/1:23,0:23:68.55:533,69,0	1/1:8,0:8:8.87:57,9,0	1/1:23,0:23:65.85:555,66,0	1/1:18,0:18:13.15:87,13,0	1/1:25,0:24:55.71:478,56,0	1/1:27,0:27:80.57:640,81,0	1/1:20,0:20:56.77:475,57,0	1/1:17,1:18:50.80:414,51,0	1/1:5,0:5:5.96:46,6,0
chr10	92738246	.	A	AAC	6957.72	PASS	AB=0.976;AC=22;AF=0.393;AN=56;BaseQRankSum=-12.076;DP=663;FS=4.662;HRun=0;HaplotypeScore=98.1449;InbreedingCoeff=0.8232;MQ=69.83;MQ0=5;MQRankSum=4.077;QD=21.61;ReadPosRankSum=4.948;VQSLOD=5.0639;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:28.43:28,0,174	0/0:12,0:12:23.47:0,23,150	0/0:27,0:19:42.09:0,42,430	0/0:18,0:12:22.93:0,23,198	1/1:4,16:24:5.71:443,6,0	0/0:21,0:21:24.95:0,25,266	0/0:19,0:19:11.82:0,12,178	0/0:33,0:33:68.86:0,69,539	1/1:0,16:20:27.15:303,27,0	1/1:5,31:36:97.96:1130,98,0	1/1:2,18:22:48.73:567,49,0	0/1:19,0:20:20.26:20,0,114	0/0:21,0:20:29.60:0,30,238	0/0:26,0:26:38.66:0,39,299	0/0:27,0:26:48.49:0,48,317	0/0:24,0:24:32.74:0,33,223	0/0:18,0:18:36.83:0,37,208	0/0:10,0:9:11.44:0,11,168	1/1:4,13:17:41.41:455,41,0	1/1:5,27:35:71.59:938,72,0	1/1:1,22:24:26.90:388,27,0	0/0:32,0:32:86.20:0,86,816	0/0:24,0:24:50.23:0,50,377	0/0:10,0:10:22.71:0,23,153	0/0:19,0:19:32.99:0,33,317	1/1:7,30:38:91.22:1178,91,0	1/1:5,34:42:63.47:1135,63,0	1/1:1,7:10:24.08:371,24,0
chr10	92738248	.	AAC	A	1973.07	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-1.398;DP=641;FS=4.200;HRun=0;HaplotypeScore=104.4148;InbreedingCoeff=0.5118;MQ=70.28;MQ0=5;MQRankSum=-3.338;QD=9.31;ReadPosRankSum=-2.484;VQSLOD=2.5428;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:10.09:0,10,268	1/1:0,12:12:36.01:390,36,0	0/0:27,0:19:24.07:0,24,465	0/1:18,0:12:32.95:33,0,138	0/0:21,0:21:27.57:0,28,374	1/1:20,0:20:5.19:183,5,0	1/1:20,0:20:8.53:161,9,0	0/1:31,0:31:52.55:53,0,395	0/0:20,0:20:30.07:0,30,333	0/0:37,0:35:92.85:0,93,1015	0/0:21,0:21:15.40:0,15,437	0/0:20,0:20:11.78:0,12,174	0/0:21,0:20:29.80:0,30,325	0/1:26,0:26:18.22:18,0,239	1/1:0,25:25:66.12:771,66,0	0/1:23,0:23:23.62:70,0,24	1/1:0,18:18:39.08:469,39,0	0/0:13,0:12:32.94:0,33,341	0/0:17,0:16:48:0,48,477	0/0:34,0:34:50.54:0,51,722	0/0:20,0:20:27.08:0,27,331	0/0:32,0:32:66.09:0,66,849	0/0:24,0:24:28.09:0,28,333	0/0:10,0:10:21.80:0,22,311	0/1:19,0:19:4.13:4,0,322	0/0:34,0:34:88.71:0,89,989	0/0:40,0:39:83.11:0,83,924	0/0:10,0:10:24.07:0,24,285
chr10	92739023	.	G	GA	9454.68	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-12.807;DP=604;FS=5.363;HRun=7;HaplotypeScore=50.6392;InbreedingCoeff=0.9955;MQ=76.37;MQ0=0;MQRankSum=-1.487;QD=30.11;ReadPosRankSum=0.953;VQSLOD=5.2775;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.06:0,48,458	1/1:1,11:12:33.06:382,33,0	0/0:11,0:11:16.14:0,16,196	0/0:12,0:12:30.05:0,30,289	1/1:2,31:33:90.23:1070,90,0	0/0:26,0:26:78.13:0,78,753	0/0:23,0:23:57.08:0,57,550	0/0:39,0:38:87.11:0,87,837	1/1:3,14:17:39.12:471,39,0	1/1:4,31:35:93.29:1123,93,0	1/1:8,29:37:38.14:946,38,0	0/0:20,0:20:48.05:0,48,453	0/0:15,0:15:45.07:0,45,435	0/0:11,0:11:27.04:0,27,261	1/1:3,18:21:48.11:564,48,0	0/0:21,0:21:48.06:0,48,458	1/1:3,26:29:72.22:870,72,0	0/0:8,0:8:24:0,24,223	1/1:3,16:19:48.15:580,48,0	1/1:7,26:33:78.21:926,78,0	1/1:0,6:6:15.05:181,15,0	0/0:15,0:15:42.07:0,42,405	0/0:32,0:32:78.04:0,78,733	0/0:13,0:13:36.05:0,36,348	0/0:27,0:27:75.11:0,75,724	1/1:2,29:31:87.25:1038,87,0	1/1:4,21:25:63.19:761,63,0	1/1:2,14:16:45.14:543,45,0
chr10	92739394	.	G	GAAAAAAA	4006.85	PASS	AB=0.935;AC=11;AF=0.196;AN=56;BaseQRankSum=8.200;DP=478;FS=7.592;HRun=4;HaplotypeScore=131.5262;InbreedingCoeff=-0.0377;MQ=69.02;MQ0=1;MQRankSum=-9.102;QD=27.63;ReadPosRankSum=0.289;VQSLOD=-0.3341;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:56.75:0,57,1376	0/0:7,0:7:18.06:0,18,419	0/0:19,0:16:35.94:0,36,630	0/0:14,0:13:29.63:0,30,569	0/1:23,0:23:99:412,0,216	0/0:23,0:23:66.12:0,66,1302	0/0:18,0:18:48.11:0,48,951	0/0:27,0:27:68.14:0,68,1382	0/1:8,6:17:99:767,0,133	0/1:14,0:14:99:200,0,159	0/1:19,1:22:99:507,0,167	0/0:24,0:24:69.09:0,69,1279	0/0:17,0:17:51.12:0,51,1087	0/0:27,0:27:81.18:0,81,1726	0/0:23,0:23:69.22:0,69,1469	0/0:15,0:15:42.10:0,42,864	0/0:20,0:20:60.16:0,60,1179	0/0:21,0:21:54.10:0,54,1089	0/1:13,0:13:99:129,0,351	0/1:10,0:10:64.85:364,0,65	1/1:5,0:5:9.50:216,10,0	0/0:9,0:9:24.08:0,24,529	0/0:21,0:21:57.19:0,57,1329	0/0:16,0:16:45.06:0,45,906	0/0:9,0:9:27.09:0,27,629	0/1:18,0:18:99:512,0,232	0/1:13,2:15:46.53:783,0,47	0/1:8,0:8:86.57:116,0,87
chr10	92739399	.	G	GAAAAAAA	7119.57	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-0.126;DP=505;FS=6.628;HRun=8;HaplotypeScore=131.8405;InbreedingCoeff=0.9720;MQ=71.32;MQ0=1;MQRankSum=-7.635;QD=42.13;ReadPosRankSum=-4.224;VQSLOD=1.1142;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:63.05:0,63,1191	0/0:6,0:6:18.06:0,18,378	0/0:18,0:15:26.90:0,27,477	0/0:13,0:13:25.88:0,26,430	1/1:12,9:26:27.53:712,28,0	0/0:21,0:21:51.11:0,51,1032	0/0:19,0:19:51.08:0,51,883	0/0:28,0:28:27.98:0,28,1081	1/1:16,0:17:33.08:1034,33,0	1/1:4,4:18:27.53:591,28,0	1/1:16,4:20:33.09:837,33,0	0/0:24,0:24:54.06:0,54,1062	0/0:19,0:19:45.03:0,45,884	0/0:30,0:30:81.15:0,81,1597	0/0:25,0:25:60.03:0,60,1219	0/0:14,0:15:39.07:0,39,718	0/0:21,0:21:48.03:0,48,954	0/0:18,0:18:30.87:0,31,886	1/1:10,2:15:15.05:516,15,0	1/1:4,5:13:15.05:498,15,0	1/1:1,3:10:12.01:350,12,0	0/0:8,0:8:21.03:0,21,430	0/0:20,0:20:57.17:0,57,1185	0/0:18,0:18:42.05:0,42,804	0/0:9,0:9:27.09:0,27,551	1/1:8,7:24:48.09:1217,48,0	1/1:11,5:16:33.10:1150,33,0	1/1:5,1:10:6.02:213,6,0
chr10	92739738	.	T	TA	5464.14	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=12.675;DP=425;FS=0.000;HRun=6;HaplotypeScore=51.3155;InbreedingCoeff=0.9642;MQ=69.27;MQ0=0;MQRankSum=-1.768;QD=31.05;ReadPosRankSum=1.210;VQSLOD=5.2274;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.10:0,48,489	0/0:12,0:12:33.04:0,33,324	0/0:8,0:8:21.03:0,21,205	0/0:4,0:4:9.02:0,9,89	1/1:1,25:26:66.17:812,66,0	0/0:15,0:15:45.08:0,45,451	0/0:12,0:12:30.07:0,30,306	0/0:31,0:31:75.16:0,75,765	1/1:1,16:17:42.13:528,42,0	1/1:1,21:22:63.19:779,63,0	1/1:1,22:23:60.19:752,60,0	0/0:14,0:14:42.09:0,42,428	0/0:10,0:10:30.07:0,30,306	0/0:15,0:15:42.09:0,42,428	0/0:6,0:6:18.04:0,18,184	0/0:8,0:8:18.04:0,18,184	0/0:20,0:20:51.09:0,51,512	0/0:15,0:15:42.10:0,42,428	1/1:3,13:16:11.52:460,12,0	1/1:3,19:22:51.07:604,51,0	1/1:0,6:6:15.05:189,15,0	0/0:9,0:9:27.06:0,27,275	0/0:19,0:19:51.10:0,51,513	0/0:8,0:8:21.05:0,21,214	0/0:26,0:26:69.15:0,69,703	1/1:1,16:17:48.15:594,48,0	1/1:3,20:23:54.64:670,55,0	1/1:1,3:4:6.02:75,6,0
chr10	92740758	.	T	TAA	10221.98	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=5.082;DP=589;FS=14.179;HRun=6;HaplotypeScore=90.3054;InbreedingCoeff=0.9995;MQ=75.35;MQ0=0;MQRankSum=-3.230;QD=42.59;ReadPosRankSum=2.489;VQSLOD=3.4857;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:36:96.03:0,96,1146	0/0:10,0:10:24.07:0,24,292	0/0:14,0:14:36.07:0,36,412	0/0:15,0:15:39.01:0,39,447	1/1:1,21:23:60.21:1014,60,0	0/0:20,0:20:54.16:0,54,647	0/0:14,0:14:30.08:0,30,366	0/0:37,0:37:99:0,105,1270	1/1:2,25:27:75.26:1268,75,0	1/1:3,24:27:72.23:1190,72,0	1/1:3,23:26:72.16:1141,72,0	0/0:18,0:18:48.15:0,48,586	0/0:16,0:16:45.13:0,45,540	0/0:16,0:16:42.11:0,42,500	0/0:16,0:16:48.13:0,48,570	0/0:16,0:16:39.10:0,39,464	0/0:20,0:20:54.12:0,54,632	0/0:14,0:14:39.12:0,39,476	1/1:5,15:20:51.17:863,51,0	1/1:5,20:26:66.10:1022,66,0	1/1:0,13:13:36.12:606,36,0	0/0:17,0:17:45.13:0,45,537	0/0:27,0:27:66.18:0,66,792	0/0:14,0:14:36.11:0,36,439	0/0:29,0:29:78.23:0,78,941	1/1:4,22:26:66.21:1089,66,0	1/1:5,29:35:78.27:1319,78,0	1/1:3,14:17:42.14:710,42,0
chr10	92741057	.	A	ACTT	11557.58	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=8.257;DP=522;FS=12.118;HRun=0;HaplotypeScore=94.2622;InbreedingCoeff=0.9570;MQ=61.43;MQ0=0;MQRankSum=-11.852;QD=58.37;ReadPosRankSum=-1.565;VQSLOD=5.3865;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:33.11:0,33,550	0/0:7,0:7:21.04:0,21,322	0/0:6,0:5:1.90:0,2,94	0/0:11,0:9:9.82:0,10,210	1/1:8,32:40:99:2497,117,0	0/0:17,0:17:45.15:0,45,750	0/0:13,0:13:33.11:0,33,546	0/0:33,0:33:84.28:0,84,1366	1/1:9,8:17:45.06:827,45,0	1/1:8,13:21:63.14:1247,63,0	1/1:5,26:31:90.24:1896,90,0	0/0:18,0:18:54.17:0,54,875	0/0:26,0:26:72.22:0,72,1149	0/0:16,0:16:45.13:0,45,699	0/0:25,0:25:72.22:0,72,1172	0/0:18,0:18:51.16:0,51,821	0/0:20,0:20:60.20:0,60,966	0/0:16,0:16:42.10:0,42,655	1/1:2,10:12:33.10:705,33,0	1/1:1,23:24:72.25:1589,72,0	1/1:8,7:15:32.98:624,33,0	0/0:25,0:25:75.23:0,75,1185	0/0:22,0:22:60.21:0,60,996	0/0:16,0:16:44.70:0,45,721	0/0:22,0:22:66.23:0,66,1097	1/1:2,19:21:63.16:1336,63,0	1/1:5,8:13:30.10:643,30,0	1/1:2,2:4:11.95:192,12,0
chr10	92741071	.	GT	G	5704.09	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=16.594;DP=510;FS=19.515;HRun=7;HaplotypeScore=90.3191;InbreedingCoeff=0.9860;MQ=63.40;MQ0=0;MQRankSum=-7.720;QD=24.27;ReadPosRankSum=-0.178;VQSLOD=3.2622;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:36.11:0,36,441	0/0:8,0:8:24.08:0,24,302	0/0:10,0:8:21.05:0,21,243	0/0:11,0:9:15:0,15,155	1/1:9,31:40:93.18:933,93,0	1/1:2,15:17:39.08:398,39,0	1/1:1,12:13:33.08:337,33,0	0/0:32,0:32:78.23:0,78,958	1/1:0,11:11:30.07:306,30,0	1/1:4,18:22:57.12:580,57,0	1/1:2,24:26:72.15:726,72,0	0/0:13,0:13:36.12:0,36,453	0/0:28,0:28:78.22:0,78,944	0/0:14,0:14:42.13:0,42,527	0/0:23,0:23:60.18:0,60,743	1/1:1,13:14:33.07:337,33,0	0/0:21,0:21:60.19:0,60,754	0/0:15,0:15:36.11:0,36,451	1/1:2,12:14:33.03:324,33,0	1/1:6,22:28:66.13:666,66,0	1/1:3,9:12:18.03:181,18,0	0/0:24,0:24:60.19:0,60,754	0/0:22,0:22:66.21:0,66,828	0/0:17,1:18:16.45:0,16,534	0/0:24,0:24:66.21:0,66,830	1/1:5,14:19:45.10:458,45,0	1/1:1,13:14:36.08:367,36,0	1/1:0,5:5:9.02:92,9,0
chr10	92741209	.	T	TTAAAAATAA	13229.26	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-0.636;DP=567;FS=7.191;HRun=0;HaplotypeScore=161.9398;InbreedingCoeff=0.9725;MQ=81.45;MQ0=0;MQRankSum=-13.198;QD=72.29;ReadPosRankSum=-2.606;VQSLOD=3.9658;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.24:0,69,1993	0/0:7,0:7:15.05:0,15,435	0/0:15,0:15:36.08:0,36,882	0/0:21,0:21:42.14:0,42,1114	1/1:19,8:30:45.11:1585,45,0	0/0:16,0:16:33.10:0,33,895	0/0:10,0:10:30.10:0,30,833	0/0:24,0:23:60.20:0,60,1607	1/1:6,5:11:15.05:704,15,0	1/1:13,15:28:66.23:3033,66,0	1/1:9,8:19:38.96:1225,39,0	0/0:27,0:27:72.23:0,72,2017	0/0:27,0:27:75.26:0,75,2138	0/0:22,0:22:63.19:0,63,1574	0/0:29,0:29:81.28:0,81,2347	0/0:22,0:22:60.21:0,60,1739	0/0:21,0:21:56.93:0,57,1471	0/0:19,0:19:8.69:0,9,1178	1/1:8,4:15:30.06:934,30,0	1/1:12,13:26:48.16:1992,48,0	1/1:7,3:11:12.04:449,12,0	0/0:23,0:23:57.20:0,57,1612	0/0:29,0:29:72.23:0,72,1969	0/0:23,0:23:63.22:0,63,1789	0/0:23,0:23:54.19:0,54,1532	1/1:10,6:18:36.10:1469,36,0	1/1:8,8:18:33.11:1477,33,0	1/1:4,2:7:9.03:360,9,0
chr10	92742222	.	C	CT	5606.29	PASS	AB=1.000;AC=35;AF=0.700;AN=50;BaseQRankSum=-6.953;DP=504;FS=2.993;HRun=9;HaplotypeScore=61.1944;InbreedingCoeff=0.5520;MQ=69.44;MQ0=12;MQRankSum=-1.054;QD=13.67;ReadPosRankSum=4.529;VQSLOD=4.7205;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:10:0:0,0,0	1/1:2,7:9:21.06:232,21,0	0/0:35,0:14:3.75:0,4,105	0/0:45,1:21:13.47:0,13,255	0/1:20,0:20:0.01:0,0,0	0/1:20,0:20:0.02:0,0,0	0/1:10,0:10:0:0,0,0	1/1:8,19:27:58.22:633,58,0	0/1:15,0:15:0:0,0,0	0/1:12,0:13:0:0,0,0	0/1:10,0:10:0:0,0,0	1/1:7,16:23:38.59:407,39,0	1/1:2,10:12:4.03:260,4,0	1/1:4,13:16:27.07:299,27,0	1/1:7,18:25:22.07:472,22,0	0/1:13,0:13:0:0,0,0	1/1:4,30:34:78.21:863,78,0	1/1:6,18:24:52.02:566,52,0	0/1:9,0:9:0:0,0,0	0/1:14,0:14:0:0,0,0	./.	1/1:5,13:18:13.05:371,13,0	1/1:5,20:25:51.11:552,51,0	1/1:6,18:24:2.12:479,2,0	1/1:3,17:20:22.07:472,22,0	./.	0/1:17,0:16:0:0,0,0	./.
chr10	92742722	.	T	TTGTGTG	5431.65	PASS	AC=46;AF=0.885;AN=52;BaseQRankSum=-5.312;DP=603;FS=4.129;HRun=0;HaplotypeScore=158.3888;InbreedingCoeff=0.6243;MQ=59.81;MQ0=5;MQRankSum=1.040;QD=11.09;ReadPosRankSum=-3.016;VQSLOD=3.0075;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:6.02:83,6,0	1/1:10,0:19:11.80:157,12,0	./.	./.	1/1:12,12:27:18.06:499,18,0	0/0:10,0:26:30.10:0,30,419	0/0:9,0:21:21.07:0,21,290	1/1:38,0:37:20.23:310,20,0	1/1:13,0:14:20.40:233,20,0	1/1:28,1:29:23.09:500,23,0	1/1:12,8:22:2.97:96,3,0	1/1:21,0:21:18.06:448,18,0	1/1:21,0:21:15.05:304,15,0	1/1:12,0:12:6.02:149,6,0	1/1:7,0:16:12.04:154,12,0	0/0:13,0:23:24.08:0,24,335	1/1:11,0:17:3.01:40,3,0	1/1:13,0:13:6.02:148,6,0	1/1:12,3:16:12.26:168,12,0	1/1:14,1:30:15.05:300,15,0	1/1:10,11:28:0.73:30,1,0	1/1:18,0:18:9.48:141,9,0	1/1:18,0:18:6.02:150,6,0	1/1:18,0:18:5.05:80,5,0	1/1:27,0:27:21.07:483,21,0	1/1:27,0:27:31.40:416,31,0	1/1:14,7:25:15.01:361,15,0	1/1:9,6:15:9.03:182,9,0
chr10	92742751	.	T	TGTGTGTGTGC	5590.73	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-0.785;DP=650;FS=20.734;HRun=0;HaplotypeScore=191.9138;InbreedingCoeff=0.1627;MQ=60.61;MQ0=7;MQRankSum=-3.949;QD=11.95;ReadPosRankSum=4.173;VQSLOD=2.0927;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:1.24:197,0,1	0/1:17,0:17:9.88:10,0,124	0/0:31,0:23:53.21:0,53,580	0/0:30,0:20:22.36:0,22,472	0/1:26,0:26:99:215,0,102	0/0:27,0:27:53.97:0,54,933	0/0:24,0:24:39.06:0,39,655	1/1:35,0:34:81.10:752,81,0	0/1:15,0:15:75.96:78,0,76	0/1:25,0:25:99:142,0,269	0/1:19,0:19:21.65:22,0,101	1/1:3,19:27:18.06:865,18,0	1/1:9,12:24:17.95:637,18,0	1/1:4,12:19:6.02:308,6,0	0/0:22,0:21:17.71:0,18,190	0/0:21,0:21:47.93:0,48,779	0/1:21,0:20:49.29:49,0,102	1/1:3,4:11:3.01:154,3,0	0/1:10,0:10:50.27:63,0,50	0/1:35,0:35:6.32:6,0,234	0/0:27,0:27:19.71:0,20,164	1/1:4,1:23:8.51:307,9,0	1/1:2,17:23:5.58:306,6,0	1/1:3,10:21:3.01:154,3,0	1/1:3,19:31:21.07:977,21,0	0/1:21,0:21:99:217,0,108	0/1:26,0:26:48.19:48,0,154	1/1:12,0:12:8.97:83,9,0
chr10	92743138	.	A	ATGGAGAGCAT	5806.44	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-8.862;DP=686;FS=0.540;HRun=0;HaplotypeScore=219.9185;InbreedingCoeff=0.8321;MQ=76.90;MQ0=0;MQRankSum=-9.626;QD=65.98;ReadPosRankSum=-2.931;VQSLOD=4.1753;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,3213	0/0:5,0:5:15.05:0,15,524	0/0:17,0:17:44.95:0,45,1188	0/0:27,0:27:66.57:0,67,1670	0/0:34,0:34:50.74:0,51,2162	1/1:0,17:29:48.10:2303,48,0	1/1:0,11:21:33.11:1750,33,0	0/0:28,0:28:81.24:0,81,2177	0/0:19,0:19:33.20:0,33,1287	0/0:32,0:32:90.24:0,90,2085	0/0:23,0:23:69.22:0,69,1658	0/0:26,0:26:75.23:0,75,2308	0/0:24,0:24:72.20:0,72,2269	0/0:25,0:25:75.24:0,75,2321	0/0:31,0:31:90.28:0,90,2880	1/1:1,11:21:33.11:1710,33,0	0/0:17,0:17:51.18:0,51,1779	0/0:14,0:14:42.14:0,42,1466	0/0:23,0:23:42.24:0,42,1480	0/0:29,0:29:78.20:0,78,1824	0/0:26,0:26:78.27:0,78,1870	0/0:28,0:28:78.21:0,78,2393	0/0:31,0:31:93.30:0,93,3006	0/0:19,0:19:51.16:0,51,1684	0/0:23,0:23:66.11:0,66,2096	0/0:27,0:27:78.21:0,78,1733	0/0:36,0:35:60.37:0,60,2368	0/1:17,0:17:42.82:43,0,926
chr10	92744395	.	T	TTGTGTG	3644.90	PASS	AB=0.726;AC=16;AF=0.286;AN=56;BaseQRankSum=2.055;DP=581;FS=16.692;HRun=0;HaplotypeScore=171.3045;InbreedingCoeff=0.8146;MQ=59.93;MQ0=18;MQRankSum=0.511;QD=20.25;ReadPosRankSum=-3.629;VQSLOD=1.7086;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:57.65:0,58,968	0/0:4,0:3:0.94:0,1,2	0/0:41,0:20:33.07:0,33,657	0/0:34,0:16:38.84:0,39,638	0/0:17,0:16:26.77:0,27,361	0/0:13,0:13:18.06:0,18,295	0/0:17,0:17:26.56:0,27,358	1/1:34,0:34:77.52:924,78,0	0/0:18,0:18:35.61:0,36,451	0/0:26,0:24:54.13:0,54,867	0/0:18,0:18:30.30:0,30,419	1/1:16,0:15:33.07:504,33,0	1/1:6,18:26:11.87:351,12,0	1/1:22,0:24:45:768,45,0	0/0:17,0:17:39.95:0,40,616	0/0:15,0:16:36.09:0,36,559	0/0:23,0:23:39.10:0,39,549	0/1:7,0:8:38.05:173,0,38	0/0:9,0:9:17.95:0,18,279	0/0:21,0:21:40.61:0,41,504	0/0:42,0:41:87.32:0,87,1256	1/1:4,15:20:2.54:37,3,0	1/1:10,2:12:17.92:279,18,0	0/1:5,16:21:0.11:0,0,0	1/1:16,2:18:39.98:608,40,0	0/0:18,0:18:45.12:0,45,693	0/0:19,0:19:47.55:0,48,633	0/0:16,0:15:22.09:0,22,502
chr10	92744406	.	AGTGTGT	A	3146.22	PASS	AB=0.769;AC=31;AF=0.596;AN=52;BaseQRankSum=-4.034;DP=581;FS=2.691;HRun=0;HaplotypeScore=156.4734;InbreedingCoeff=0.6241;MQ=52.02;MQ0=25;MQRankSum=-2.170;QD=9.45;ReadPosRankSum=0.115;VQSLOD=2.8863;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:32:26.91:27,0,215	1/1:3,2:3:3.01:56,3,0	./.	./.	1/1:14,4:17:9.92:172,10,0	0/1:9,0:11:5.54:75,0,6	1/1:11,0:15:3.82:44,4,0	0/0:33,0:33:28.15:0,28,206	1/1:9,6:16:12.66:214,13,0	1/1:17,5:21:11.62:156,12,0	1/1:13,3:17:18.18:276,18,0	0/0:15,0:14:11.30:0,11,161	0/0:23,0:23:12.51:0,13,339	0/0:24,0:24:11.66:0,12,415	1/1:9,8:19:3.26:314,3,0	1/1:8,0:13:15.52:210,16,0	1/1:12,9:21:3.01:61,3,0	0/0:8,0:8:9.02:0,9,144	0/1:7,1:9:2.73:142,0,3	1/1:12,5:20:25.66:407,26,0	1/1:51,0:49:28.31:329,28,0	0/0:19,0:19:10.60:0,11,221	0/0:16,0:16:12.04:0,12,304	0/0:19,0:18:5.77:0,6,145	0/0:24,0:24:35.56:0,36,670	1/1:18,0:19:11.82:144,12,0	1/1:16,6:22:28.33:502,28,0	1/1:13,2:14:12.04:207,12,0
chr10	92744501	.	TA	T	8888.19	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=9.013;DP=451;FS=1.571;HRun=8;HaplotypeScore=52.7235;InbreedingCoeff=0.9902;MQ=82.48;MQ0=0;MQRankSum=-2.981;QD=25.11;ReadPosRankSum=0.313;VQSLOD=5.4761;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.13:0,48,568	0/0:10,0:10:30.09:0,30,362	0/0:16,0:16:30.06:0,30,336	0/0:13,0:13:21.03:0,21,238	1/1:1,19:20:54.08:521,54,0	1/1:5,16:20:45.07:435,45,0	1/1:3,9:12:27.04:261,27,0	1/1:1,18:19:51.07:492,51,0	1/1:3,10:13:27.04:261,27,0	1/1:0,18:18:54.09:521,54,0	1/1:2,24:26:69.11:666,69,0	1/1:1,13:14:39.06:377,39,0	1/1:0,13:13:39.06:377,39,0	1/1:2,12:14:36.06:348,36,0	0/0:19,0:19:54.17:0,54,652	1/1:0,13:13:36.06:348,36,0	0/0:22,0:22:54.16:0,54,643	1/1:0,8:8:21.03:203,21,0	1/1:1,11:12:33.05:319,33,0	1/1:1,27:28:78.12:753,78,0	1/1:2,7:10:20.06:180,20,0	1/1:0,16:16:48.08:463,48,0	1/1:3,15:18:45.06:435,45,0	1/1:1,10:11:30.05:290,30,0	1/1:3,22:25:54.09:522,54,0	1/1:2,21:23:63.07:597,63,0	1/1:3,13:16:42.07:405,42,0	1/1:0,4:4:12.02:116,12,0
chr10	92746027	.	TGAGGAA	T	8144.33	PASS	AB=0.947;AC=21;AF=0.375;AN=56;BaseQRankSum=14.876;DP=637;FS=0.755;HRun=0;HaplotypeScore=134.7615;InbreedingCoeff=0.9117;MQ=58.45;MQ0=2;MQRankSum=-7.976;QD=35.41;ReadPosRankSum=1.216;VQSLOD=4.5833;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:55.87:0,56,1558	0/0:10,0:10:27.09:0,27,864	0/0:26,0:15:17.20:0,17,461	0/0:21,0:14:11.14:0,11,341	1/1:5,22:27:57.04:1072,57,0	0/0:21,0:21:48.12:0,48,1286	0/0:21,0:21:32.71:0,33,1325	0/0:20,0:20:48.16:0,48,1344	1/1:5,11:16:27.09:569,27,0	1/1:6,19:25:57.13:1125,57,0	1/1:11,28:39:71.99:1264,72,0	0/0:17,0:17:39.04:0,39,892	0/0:31,0:31:75.23:0,75,2127	0/0:18,0:18:33.11:0,33,992	0/0:29,0:29:69.20:0,69,1937	0/1:17,1:18:15.58:16,0,1450	0/0:41,0:41:90.22:0,90,2488	0/0:20,0:20:42.11:0,42,1079	1/1:7,17:24:51.13:793,51,0	1/1:0,18:18:51.07:998,51,0	1/1:6,0:5:15.01:273,15,0	0/0:21,0:21:57.17:0,57,1697	0/0:31,0:31:72.22:0,72,2176	0/0:26,0:26:54.17:0,54,1626	0/0:19,0:19:54.16:0,54,1583	1/1:4,20:23:57.12:1009,57,0	1/1:3,21:24:36.12:769,36,0	1/1:0,9:9:12.04:256,12,0
chr10	92746569	.	TTTG	T	1699.22	PASS	AB=0.995;AC=20;AF=0.357;AN=56;BaseQRankSum=6.243;DP=492;FS=10.372;HRun=0;HaplotypeScore=147.7284;InbreedingCoeff=0.2309;MQ=61.89;MQ0=12;MQRankSum=-6.181;QD=6.99;ReadPosRankSum=4.437;VQSLOD=2.3296;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:55.58:0,56,391	0/0:10,0:10:30.09:0,30,552	0/1:39,0:17:9.11:9,0,177	0/0:45,0:19:16.12:0,16,315	0/1:18,1:19:11.55:197,0,12	0/1:13,0:13:63.17:105,0,63	0/1:12,0:11:26.66:102,0,27	0/0:20,0:18:41.80:0,42,291	1/1:7,0:7:19.76:116,20,0	1/1:15,1:16:4.80:200,5,0	0/1:22,0:22:31.88:124,0,32	0/0:11,0:11:22.57:0,23,153	0/1:12,0:12:0.54:1,0,55	0/0:12,0:11:14.96:0,15,126	0/0:17,0:17:48.03:0,48,704	0/1:16,0:15:5.19:159,0,5	0/0:26,0:26:48.13:0,48,918	0/0:20,0:20:26.58:0,27,128	1/1:15,0:12:23.02:121,23,0	0/1:20,0:20:38.91:202,0,39	0/1:8,0:7:5.28:5,0,11	0/0:14,0:13:22.37:0,22,151	0/0:18,0:18:18.46:0,18,200	0/0:4,0:3:5.22:0,5,35	0/0:22,0:22:37.99:0,38,210	1/1:23,0:22:4.65:233,5,0	1/1:11,3:14:13.17:261,13,0	0/1:7,0:7:41.98:42,0,51
chr10	92746571	.	T	TG	2279.67	PASS	AB=0.860;AC=19;AF=0.339;AN=56;BaseQRankSum=-4.845;DP=486;FS=1.443;HRun=1;HaplotypeScore=133.0324;InbreedingCoeff=0.6927;MQ=61.69;MQ0=13;MQRankSum=0.677;QD=10.41;ReadPosRankSum=0.248;VQSLOD=1.5795;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:67.79:0,68,628	0/0:11,0:11:27.05:0,27,320	0/1:38,0:16:2.69:3,0,90	0/1:43,0:19:4.90:5,0,138	0/0:19,0:19:44.74:0,45,263	0/0:13,0:13:17.89:0,18,134	0/0:11,0:11:25.99:0,26,175	1/1:3,19:19:53.35:495,53,0	0/0:7,0:7:19.93:0,20,123	0/0:16,0:16:45.02:0,45,302	0/0:19,0:19:52.78:0,53,372	1/1:5,6:11:16.40:264,16,0	1/1:4,8:12:16.95:154,17,0	1/1:1,10:11:1.40:233,1,0	0/0:16,0:16:44.73:0,45,449	0/0:13,0:14:29.54:0,30,201	0/0:25,0:25:48.06:0,48,527	1/1:8,12:21:8.97:249,9,0	0/0:13,0:10:25.21:0,25,163	0/0:20,0:20:52.22:0,52,371	0/0:8,0:7:5.91:0,6,38	1/1:8,3:11:1.67:216,2,0	0/1:7,11:18:8.14:317,0,8	1/1:3,1:3:6:62,6,0	1/1:8,14:22:47.09:469,47,0	0/0:23,0:22:58.38:0,58,394	0/0:14,0:14:33.60:0,34,205	0/0:7,0:7:17.18:0,17,99
chr10	92746572	.	GTTT	G	4217.02	PASS	AB=0.938;AC=25;AF=0.446;AN=56;BaseQRankSum=0.505;DP=484;FS=13.075;HRun=10;HaplotypeScore=139.2510;InbreedingCoeff=0.6226;MQ=61.42;MQ0=14;MQRankSum=-4.677;QD=16.67;ReadPosRankSum=1.314;VQSLOD=1.6957;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:46.91:49,0,47	0/0:10,0:10:30.07:0,30,538	0/1:38,0:16:13.75:14,0,129	0/0:48,0:19:23.08:0,23,268	1/1:1,16:18:44.92:424,45,0	0/1:12,1:14:92.98:133,0,93	1/1:11,1:11:6.78:199,7,0	0/0:22,0:19:37.98:0,38,293	1/1:1,6:7:21.04:233,21,0	1/1:5,11:16:22.66:444,23,0	1/1:5,14:19:43.93:401,44,0	0/0:9,0:11:29.37:0,29,254	0/0:9,0:12:15.12:0,15,120	0/0:12,0:11:23.77:0,24,210	0/0:15,0:15:33.08:0,33,624	0/1:13,2:14:6.68:273,0,7	0/0:25,0:25:45.15:0,45,911	0/0:20,0:21:30.57:0,31,217	1/1:1,12:10:27.04:302,27,0	1/1:8,11:19:48.09:564,48,0	1/1:9,0:8:3:29,3,0	0/0:11,0:11:20.30:0,20,138	0/0:13,0:18:39.02:0,39,332	0/0:4,0:3:5.87:0,6,42	0/0:15,0:20:37.14:0,37,291	1/1:8,15:22:54.14:636,54,0	1/1:8,6:14:36.08:411,36,0	0/1:6,1:7:3.04:104,0,3
chr10	92746574	.	T	TTTTTTG	5889.99	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-3.310;DP=489;FS=3.104;HRun=0;HaplotypeScore=166.9302;InbreedingCoeff=0.3173;MQ=61.89;MQ0=14;MQRankSum=-4.399;QD=20.89;ReadPosRankSum=-1.555;VQSLOD=4.5520;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:33.64:34,0,34	0/0:10,0:10:30.07:0,30,576	0/0:40,0:16:0.77:0,1,142	0/0:52,0:21:23.78:0,24,306	1/1:18,0:18:12.60:755,13,0	0/1:16,0:16:34.41:124,0,34	0/1:12,0:11:5.52:145,0,6	0/0:21,0:18:5.81:0,6,211	1/1:7,0:7:7.79:299,8,0	1/1:15,0:15:39.78:583,40,0	1/1:19,0:19:41.92:760,42,0	0/1:12,0:12:62.26:62,0,110	0/0:12,0:12:17.53:0,18,155	0/1:12,0:11:14.88:15,0,131	0/0:13,0:13:32.74:0,33,563	0/1:15,0:14:4.52:163,0,5	0/0:25,0:25:45.15:0,45,903	0/0:23,0:22:19.53:0,20,233	1/1:13,0:10:26.45:487,26,0	1/1:19,0:19:39.06:664,39,0	1/1:2,7:8:3.01:76,3,0	0/0:11,0:10:13.91:0,14,99	0/1:19,0:19:71.83:72,0,186	0/1:4,0:3:1.69:2,0,50	0/1:20,0:20:5.03:5,0,306	1/1:23,0:22:44.87:1011,45,0	1/1:14,0:14:2.53:425,3,0	1/1:7,0:7:10.41:208,10,0
chr10	92746582	.	TG	T	4889.04	PASS	AB=0.974;AC=47;AF=0.839;AN=56;BaseQRankSum=3.335;DP=481;FS=12.783;HRun=1;HaplotypeScore=127.0312;InbreedingCoeff=0.7808;MQ=55.08;MQ0=15;MQRankSum=-7.417;QD=12.80;ReadPosRankSum=-0.491;VQSLOD=2.5066;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,4:27:69.54:506,70,0	0/0:11,0:11:14.41:0,14,114	0/1:37,1:12:14.60:15,0,16	0/0:46,1:16:8.29:0,8,78	1/1:20,0:20:39.63:247,40,0	1/1:17,2:19:46.75:290,47,0	1/1:10,1:10:28.79:174,29,0	1/1:17,0:14:29.07:178,29,0	1/1:9,0:9:23.65:160,24,0	1/1:15,0:15:42.29:277,42,0	1/1:19,0:19:46.03:299,46,0	1/1:12,0:12:29.03:170,29,0	1/1:11,0:11:20.74:126,21,0	1/1:9,0:8:22.99:152,23,0	0/0:13,0:12:23.71:0,24,110	1/1:12,3:14:38.83:249,39,0	0/0:28,0:28:25.84:0,26,175	1/1:22,1:22:31.30:186,31,0	1/1:16,0:12:24.57:176,25,0	1/1:19,0:19:43.34:270,43,0	1/1:8,0:7:2.84:20,3,0	1/1:9,1:9:21.74:133,22,0	1/1:18,0:18:40.84:231,41,0	1/1:2,0:2:5.96:44,6,0	1/1:20,0:20:43.18:246,43,0	1/1:23,0:22:58.62:376,59,0	1/1:15,1:16:38.40:267,38,0	1/1:5,0:5:14.58:96,15,0
chr10	92746583	.	GT	G	1381.22	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=4.787;DP=484;FS=0.000;HRun=10;HaplotypeScore=145.3381;InbreedingCoeff=0.7707;MQ=54.82;MQ0=16;MQRankSum=-5.205;QD=7.85;ReadPosRankSum=-0.551;VQSLOD=1.0152;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:30.33:66,0,30	0/0:3,0:11:25.65:0,26,135	0/0:35,1:11:9.07:0,9,60	0/0:47,1:16:21.57:0,22,106	1/1:8,12:20:34.42:179,34,0	0/0:19,0:19:23.47:0,23,138	0/0:11,0:10:16.91:0,17,86	0/0:17,0:14:28.64:0,29,158	1/1:3,6:9:19.36:127,19,0	1/1:4,11:15:25.47:186,25,0	1/1:5,14:19:4.87:113,5,0	0/0:13,0:13:14.27:0,14,77	0/0:11,0:11:14.89:0,15,69	0/0:9,0:8:4.50:0,5,69	0/0:8,0:13:31.74:0,32,209	0/0:14,0:13:17.23:0,17,101	0/0:4,0:29:42.13:0,42,238	0/0:23,0:22:22.12:0,22,95	1/1:7,9:12:0.94:102,1,0	1/1:9,10:19:34.44:230,34,0	1/1:6,0:6:2.73:14,3,0	0/0:11,0:10:16.66:0,17,70	0/0:19,0:19:26.95:0,27,142	0/0:2,0:2:2.22:0,2,7	0/0:21,0:21:34.74:0,35,150	1/1:7,15:22:40.91:333,41,0	1/1:8,8:16:21.83:146,22,0	1/1:4,1:5:10.13:83,10,0
chr10	92746589	.	T	TTG	597.98	PASS	AB=0.969;AC=23;AF=0.411;AN=56;BaseQRankSum=-1.700;DP=485;FS=5.945;HRun=0;HaplotypeScore=155.6014;InbreedingCoeff=-0.4872;MQ=50.87;MQ0=23;MQRankSum=-0.429;QD=1.66;ReadPosRankSum=0.467;VQSLOD=2.3952;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:9.53:0,10,245	0/0:11,0:11:25.84:0,26,122	0/1:36,0:9:10.28:10,0,87	0/1:43,0:13:24.19:24,0,127	0/1:19,2:21:18.44:18,0,56	0/0:20,0:20:4.62:0,5,222	0/1:10,0:9:28.32:28,0,97	0/1:19,0:16:32.51:33,0,99	0/1:9,1:10:36.28:36,0,57	0/0:16,0:16:2.14:0,2,94	0/1:16,2:18:47.25:47,0,76	0/1:13,0:13:6.07:6,0,87	0/1:10,0:10:16.66:17,0,18	0/1:9,0:8:22.42:43,0,22	0/0:14,0:13:6.30:0,6,168	0/1:14,0:13:9.18:9,0,167	0/0:30,0:30:44.14:0,44,225	0/1:23,0:22:45.64:54,0,46	0/1:14,0:10:9.61:67,0,10	0/1:16,1:18:13.25:13,0,75	0/0:6,0:5:2.03:0,2,10	0/1:12,0:11:25.43:25,0,61	0/1:19,0:19:44.50:83,0,45	1/1:3,0:2:3.27:13,3,0	0/1:21,0:21:42.98:64,0,43	0/1:24,1:24:67.59:68,0,100	0/1:13,3:16:56.26:80,0,56	1/1:4,0:5:4.71:13,5,0
chr10	92746592	.	TG	T	1907.02	PASS	AB=0.961;AC=31;AF=0.554;AN=56;BaseQRankSum=5.300;DP=472;FS=2.512;HRun=1;HaplotypeScore=132.5145;InbreedingCoeff=0.4950;MQ=50.93;MQ0=28;MQRankSum=-5.930;QD=6.29;ReadPosRankSum=-2.181;VQSLOD=-0.1111;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,1:28:11.40:352,11,0	0/0:11,0:11:29:0,29,164	0/0:35,1:8:7.42:0,7,68	0/1:43,0:13:26.79:27,0,66	1/1:19,1:20:37.84:182,38,0	0/1:18,1:19:27.52:28,0,98	1/1:10,0:9:8.15:71,8,0	0/0:21,0:18:41.13:0,41,302	1/1:10,0:10:25.50:139,25,0	1/1:15,0:15:34.36:206,34,0	1/1:18,0:18:36.43:215,36,0	0/1:13,0:13:21.19:21,0,124	0/1:9,2:11:0.04:0,0,58	0/0:10,0:9:7.89:0,8,83	0/0:14,0:13:30.77:0,31,217	0/1:12,1:12:25.34:77,0,25	0/0:29,0:29:43.80:0,44,292	0/1:20,0:19:13.72:14,0,107	1/1:12,0:9:17.71:85,18,0	1/1:17,1:18:33.96:168,34,0	1/1:6,0:5:4.98:24,5,0	0/0:13,0:12:15.32:0,15,124	0/0:15,1:16:14.20:0,14,223	0/1:3,0:2:0.27:0,0,10	0/0:19,0:19:5.95:0,6,210	1/1:24,0:23:51.95:252,52,0	1/1:15,1:16:30.26:176,30,0	1/1:4,0:4:11.32:68,11,0
chr10	92746593	.	GT	G	493.30	PASS	AB=0.957;AC=10;AF=0.179;AN=56;BaseQRankSum=4.336;DP=476;FS=7.330;HRun=9;HaplotypeScore=139.8569;InbreedingCoeff=0.0735;MQ=49.52;MQ0=28;MQRankSum=-3.164;QD=2.52;ReadPosRankSum=4.619;VQSLOD=-0.2968;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,13:27:10.35:511,0,10	0/0:11,0:11:30.10:0,30,392	0/1:33,0:7:12.13:12,0,21	0/1:42,0:13:27.94:28,0,31	0/0:20,0:20:11.55:0,12,59	0/0:19,0:19:37.63:0,38,284	0/0:11,0:10:15.52:0,16,78	0/0:22,0:19:47.32:0,47,521	0/1:10,0:10:1.51:2,0,3	0/0:15,0:15:0.99:0,1,32	0/1:18,0:18:1.02:1,0,62	0/0:13,0:13:32.53:0,33,329	0/0:11,0:11:17.43:0,17,183	0/0:10,0:9:18.98:0,19,173	0/0:14,0:13:36.02:0,36,414	0/0:14,0:13:19.70:0,20,127	0/0:30,0:30:59.89:0,60,705	0/0:21,0:20:29.19:0,29,288	0/0:12,0:9:0.08:0,0,21	0/1:18,0:18:4.43:4,0,22	1/1:7,0:6:2.55:20,3,0	0/0:14,0:13:21.01:0,21,246	0/0:17,0:17:35.13:0,35,448	0/0:3,0:2:5.50:0,6,40	0/0:19,0:19:32.63:0,33,433	0/1:24,0:23:19.29:29,0,19	0/1:16,0:16:1.77:8,0,2	0/0:4,0:4:1.53:0,2,9
chr10	92746596	.	TTGTTTTG	T	4353.04	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=2.402;DP=465;FS=1.346;HRun=0;HaplotypeScore=160.9713;InbreedingCoeff=0.3764;MQ=47.05;MQ0=29;MQRankSum=-5.502;QD=14.71;ReadPosRankSum=-4.038;VQSLOD=3.3877;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:33.67:34,0,720	0/0:10,0:10:28.91:0,29,709	0/0:30,0:5:8.45:0,8,47	0/1:40,0:11:50.86:51,0,85	1/1:17,2:19:49.95:591,50,0	0/1:19,0:19:23.25:23,0,422	0/1:12,0:11:11.91:12,0,246	0/0:22,0:19:25.04:0,25,522	1/1:9,1:10:23.55:344,24,0	1/1:14,0:14:35.35:485,35,0	1/1:15,2:18:46.66:507,47,0	0/1:13,0:13:17.88:18,0,553	0/1:10,0:10:54.67:55,0,243	0/0:10,0:9:20.25:0,20,548	0/0:14,0:13:36.11:0,36,922	0/1:14,0:13:64.46:64,0,261	0/0:30,0:30:59.89:0,60,1577	0/1:22,0:21:18.15:18,0,496	1/1:12,0:9:20.05:196,20,0	1/1:16,1:17:30.25:477,30,0	1/1:7,0:6:8.82:70,9,0	0/0:14,0:13:19.53:0,20,329	0/0:18,0:18:20.13:0,20,836	0/0:3,0:2:2.90:0,3,24	0/0:18,0:18:7.97:0,8,782	1/1:20,2:21:52.51:700,53,0	1/1:16,1:17:31.70:505,32,0	1/1:4,0:4:12.04:203,12,0
chr10	92746597	.	TGTTTTG	T	4903.31	PASS	AB=0.957;AC=31;AF=0.554;AN=56;BaseQRankSum=0.884;DP=454;FS=6.762;HRun=0;HaplotypeScore=147.7217;InbreedingCoeff=0.1654;MQ=45.98;MQ0=27;MQRankSum=-7.713;QD=14.90;ReadPosRankSum=-4.083;VQSLOD=2.7366;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:25:23.42:23,0,607	0/0:10,0:10:30.06:0,30,682	0/0:30,0:5:8.34:0,8,49	0/1:35,0:9:47.24:47,0,59	1/1:14,4:19:50.17:544,50,0	0/1:18,0:19:81.32:81,0,293	0/1:12,0:11:55.51:56,0,164	0/1:20,0:19:18.67:19,0,485	1/1:7,2:9:23.56:379,24,0	1/1:7,6:13:38.42:605,38,0	1/1:11,7:18:46.75:540,47,0	0/1:13,0:13:29.74:30,0,476	0/1:8,0:10:72.10:72,0,226	0/0:10,0:9:20.19:0,20,472	0/0:14,0:13:36.11:0,36,852	0/1:14,0:13:83.61:84,0,201	0/0:30,0:30:58.07:0,58,1412	0/1:22,0:21:31.12:31,0,430	1/1:10,2:9:19.63:229,20,0	1/1:9,6:15:35.22:550,35,0	1/1:5,0:5:8.85:71,9,0	0/0:13,0:13:7.59:0,8,247	0/1:18,0:19:22.19:22,0,711	0/1:3,0:2:8.40:8,0,18	0/0:18,0:18:5.51:0,6,710	1/1:17,3:21:56.04:740,56,0	1/1:12,3:16:31.91:548,32,0	1/1:3,1:4:12.04:225,12,0
chr10	92746601	.	TTG	T	1780.37	PASS	AB=0.972;AC=30;AF=0.536;AN=56;BaseQRankSum=5.240;DP=437;FS=1.984;HRun=0;HaplotypeScore=125.5805;InbreedingCoeff=0.3943;MQ=46.80;MQ0=26;MQRankSum=-5.024;QD=5.93;ReadPosRankSum=-0.762;VQSLOD=3.3501;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:11.90:12,0,268	0/0:10,0:10:29.85:0,30,369	0/1:25,0:5:3.06:3,0,7	0/1:36,0:8:23.07:24,0,23	1/1:19,1:20:36.95:249,37,0	1/1:17,2:19:12.60:206,13,0	0/1:10,1:10:2.52:78,0,3	0/0:19,0:17:5.80:0,6,261	1/1:8,0:8:19.95:127,20,0	1/1:12,0:12:29.80:181,30,0	1/1:17,0:17:29.20:166,29,0	0/1:13,0:13:4.99:5,0,227	0/1:9,1:10:36.63:37,0,66	0/0:9,0:8:20.64:0,21,181	0/0:14,0:13:31.22:0,31,408	0/1:13,0:12:33.51:63,0,34	0/0:31,0:31:63.01:0,63,820	0/0:21,0:19:1.57:0,2,227	1/1:5,0:4:10.62:60,11,0	1/1:16,0:16:29.50:186,30,0	1/1:4,0:4:7.49:44,7,0	0/0:12,0:12:17.17:0,17,130	0/1:19,1:20:15.80:16,0,331	0/0:3,0:2:1.82:0,2,5	0/0:18,0:18:10.31:0,10,328	1/1:18,3:20:32.69:277,33,0	1/1:16,0:16:28.73:187,29,0	1/1:3,0:3:8.43:50,8,0
chr10	92746602	.	TG	T	2878.66	PASS	AB=0.960;AC=33;AF=0.589;AN=56;BaseQRankSum=4.110;DP=422;FS=5.544;HRun=1;HaplotypeScore=111.1735;InbreedingCoeff=0.2746;MQ=45.55;MQ0=24;MQRankSum=-2.969;QD=8.83;ReadPosRankSum=0.004;VQSLOD=0.8861;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:70.47:70,0,128	0/0:10,0:10:25.77:0,26,281	0/1:22,1:4:1.57:8,0,2	0/1:35,1:8:21.82:27,0,22	1/1:18,1:19:41.98:261,42,0	1/1:11,8:19:27.34:390,27,0	1/1:7,3:9:3.20:177,3,0	0/1:17,1:16:22.03:22,0,241	1/1:7,1:8:20.40:195,20,0	1/1:8,4:12:33.48:332,33,0	1/1:10,4:14:28.35:219,28,0	0/1:13,0:13:19.69:20,0,125	0/1:10,0:10:45.52:46,0,49	0/0:9,0:8:9.24:0,9,103	0/0:14,0:13:29.63:0,30,309	0/1:9,4:12:19.57:121,0,20	0/0:31,0:31:61.68:0,62,643	0/1:21,0:19:22.63:23,0,130	1/1:5,0:4:9.47:97,9,0	1/1:11,3:14:31.70:272,32,0	1/1:2,2:4:8.31:48,8,0	0/0:12,0:12:15.64:0,16,78	0/1:20,0:20:47.02:47,0,208	0/0:2,0:1:2.04:0,2,6	0/0:18,0:18:8.46:0,8,259	1/1:18,1:18:40.75:316,41,0	1/1:9,7:16:29.44:285,29,0	1/1:2,1:3:8.99:92,9,0
chr10	92747102	.	C	CT	6986.56	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.219;DP=730;FS=0.000;HRun=6;HaplotypeScore=94.3370;InbreedingCoeff=0.9973;MQ=60.63;MQ0=1;MQRankSum=3.201;QD=29.73;ReadPosRankSum=0.837;VQSLOD=4.9080;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:65.43:0,65,295	0/0:17,0:17:16.86:0,17,113	0/0:27,0:27:72.16:0,72,732	0/0:22,0:18:44.55:0,45,420	0/0:33,0:33:90.18:0,90,908	0/0:28,0:28:75.14:0,75,752	0/0:27,0:27:69.11:0,69,689	1/1:8,29:36:78.17:925,78,0	0/0:16,0:16:48.04:0,48,471	0/0:36,0:36:99:0,102,1028	0/0:23,0:23:63.14:0,63,643	1/1:2,20:22:60.19:746,60,0	1/1:3,23:26:66.21:823,66,0	1/1:1,14:15:42.13:523,42,0	0/0:27,0:27:35.98:0,36,203	0/0:18,0:18:51.12:0,51,520	0/0:18,0:18:19.18:0,19,129	1/1:3,31:34:77.92:945,78,0	0/0:18,0:18:51.09:0,51,510	0/0:28,0:28:72.13:0,72,724	0/0:30,0:30:81.14:0,81,810	1/1:6,19:25:62.85:745,63,0	1/1:6,25:31:64.14:787,64,0	1/1:2,19:21:54.17:672,54,0	1/1:1,23:24:66.21:822,66,0	0/0:39,0:39:99:0,111,1125	0/0:35,0:35:99:0,105,1058	0/0:17,0:17:36.04:0,36,356
chr10	92748747	.	TATAC	T	4010.90	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=3.617;DP=427;FS=4.286;HRun=0;HaplotypeScore=98.3150;InbreedingCoeff=0.9668;MQ=63.46;MQ0=8;MQRankSum=2.679;QD=27.66;ReadPosRankSum=2.966;VQSLOD=3.1178;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:23.95:0,24,260	0/0:11,0:11:17.86:0,18,225	0/0:27,0:16:45:0,45,471	0/0:19,0:15:38.46:0,38,570	1/1:1,11:12:9.03:157,9,0	0/0:18,0:18:24.46:0,24,294	0/0:11,0:11:14.98:0,15,161	0/0:25,0:24:65.86:0,66,784	1/1:1,8:10:12.04:218,12,0	1/1:0,9:9:23.73:284,24,0	1/1:0,14:14:24.08:455,24,0	0/0:10,0:10:21.01:0,21,312	0/0:11,0:11:21.01:0,21,306	0/0:17,0:17:42.03:0,42,602	0/0:22,0:22:38.99:0,39,388	0/0:14,0:14:36.01:0,36,575	0/0:12,0:11:21.40:0,21,140	0/0:6,0:6:15.01:0,15,264	1/1:1,18:20:56.70:527,57,0	1/1:1,12:14:18.06:336,18,0	1/1:13,5:18:39.92:545,40,0	0/0:12,0:12:29.94:0,30,312	0/0:16,0:16:26.96:0,27,345	0/0:15,0:15:20.99:0,21,307	0/0:16,0:15:35.88:0,36,398	1/1:1,16:17:44.99:631,45,0	1/1:1,24:25:35.55:680,36,0	1/1:0,6:6:9.03:177,9,0
chr10	92748889	.	GTA	G	3873.89	PASS	AB=1.000;AC=19;AF=0.365;AN=52;BaseQRankSum=0.468;DP=397;FS=0.000;HRun=0;HaplotypeScore=79.1353;InbreedingCoeff=0.8419;MQ=56.94;MQ0=4;MQRankSum=4.511;QD=23.77;ReadPosRankSum=0.863;VQSLOD=4.1810;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:42.14:0,42,708	0/0:5,0:5:12.04:0,12,199	0/0:7,0:4:2.68:0,3,11	./.	0/1:3,0:15:8.01:8,0,26	0/0:17,0:17:39.12:0,39,627	0/0:7,0:7:15.05:0,15,253	1/1:3,22:25:66.17:818,66,0	./.	0/0:5,0:20:6.14:0,6,212	0/0:4,0:10:15:0,15,131	1/1:4,12:16:27.09:347,27,0	1/1:0,9:9:18.06:231,18,0	1/1:3,13:15:27.09:347,27,0	0/0:16,0:16:27.08:0,27,425	0/0:15,0:15:30.10:0,30,502	0/0:17,0:17:39.13:0,39,657	1/1:2,9:10:18.06:231,18,0	0/0:3,0:14:30.41:0,30,252	0/0:4,0:13:7.31:0,7,76	0/0:2,0:5:6:0,6,53	1/1:0,14:13:36.12:463,36,0	1/1:2,13:15:30.10:386,30,0	1/1:3,11:14:27.09:347,27,0	1/1:3,25:27:54.18:695,54,0	0/0:4,0:17:37.48:0,37,289	0/0:4,0:17:15.18:0,15,141	0/0:1,0:16:24.01:0,24,213
chr10	92749025	.	TACAC	T	3669.73	PASS	AB=0.745;AC=48;AF=0.923;AN=52;BaseQRankSum=0.963;DP=489;FS=1.986;HRun=0;HaplotypeScore=117.6311;InbreedingCoeff=0.0741;MQ=59.94;MQ0=17;MQRankSum=-0.311;QD=8.48;ReadPosRankSum=-0.413;VQSLOD=2.7326;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:28:14.69:139,15,0	1/1:5,5:10:5.87:94,6,0	./.	./.	1/1:8,0:18:18.02:168,18,0	1/1:8,0:22:21.02:196,21,0	1/1:8,0:12:3:28,3,0	1/1:15,2:16:6.02:86,6,0	1/1:6,0:9:6.01:56,6,0	1/1:14,0:18:2.89:28,3,0	1/1:9,0:13:9.01:84,9,0	1/1:11,6:17:3.01:47,3,0	1/1:7,9:17:2.57:175,3,0	1/1:3,8:11:15.05:235,15,0	1/1:12,7:19:21.06:310,21,0	1/1:6,0:21:39.04:363,39,0	0/1:13,6:20:17.10:275,0,17	1/1:9,6:14:12.03:169,12,0	1/1:15,0:16:3:28,3,0	1/1:11,0:19:20.62:177,21,0	0/0:17,0:19:2.98:0,3,71	1/1:11,8:18:9.03:141,9,0	1/1:8,8:16:9.03:141,9,0	1/1:16,15:28:24.08:376,24,0	0/1:11,6:17:6.99:128,0,7	1/1:7,0:11:6.48:57,6,0	1/1:8,0:15:14.86:139,15,0	1/1:8,0:12:3:28,3,0
chr10	92749641	.	TCTTTTC	T	5603.91	PASS	AB=0.965;AC=33;AF=0.589;AN=56;BaseQRankSum=5.955;DP=420;FS=0.452;HRun=0;HaplotypeScore=133.7361;InbreedingCoeff=0.4048;MQ=71.31;MQ0=13;MQRankSum=-4.801;QD=22.78;ReadPosRankSum=0.777;VQSLOD=4.5253;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:8.53:0,9,278	0/0:6,0:6:18.04:0,18,449	0/0:43,0:14:13.22:0,13,292	0/0:50,0:24:32.14:0,32,558	1/1:3,11:14:16.81:332,17,0	0/1:17,0:17:53.23:53,0,175	0/0:13,0:13:13.95:0,14,86	0/1:19,0:18:65.42:65,0,151	1/1:4,0:6:17.39:145,17,0	1/1:0,18:21:59.76:916,60,0	1/1:11,10:23:59.24:869,59,0	1/1:9,1:11:2.82:220,3,0	1/1:13,1:14:10.92:272,11,0	0/1:8,1:9:9.47:68,0,9	0/0:6,0:6:18.05:0,18,427	0/0:10,0:10:3.01:0,3,37	0/0:25,0:25:69.06:0,69,1632	1/1:6,0:6:9.91:93,10,0	1/1:9,1:10:26.47:353,26,0	1/1:1,12:14:22.81:300,23,0	1/1:5,1:6:14.38:161,14,0	0/1:8,0:8:47.02:47,0,51	0/1:10,1:11:38.05:176,0,38	0/1:4,0:4:15.27:25,0,15	0/1:14,0:14:21.21:251,0,21	1/1:4,11:14:38.30:610,38,0	1/1:11,3:16:23.17:460,23,0	1/1:5,0:5:15.03:186,15,0
chr10	92749646	.	TC	T	4803.33	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=4.635;DP=447;FS=3.449;HRun=1;HaplotypeScore=114.5350;InbreedingCoeff=0.7480;MQ=65.35;MQ0=23;MQRankSum=-3.772;QD=13.09;ReadPosRankSum=1.244;VQSLOD=4.0677;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,10:19:41.35:327,41,0	0/1:7,0:6:0.74:1,0,149	0/1:47,0:13:1.41:1,0,91	0/0:50,0:22:30.96:0,31,259	1/1:15,0:15:13.12:117,13,0	1/1:15,1:16:39.66:315,40,0	1/1:0,13:13:15.03:160,15,0	1/1:15,4:18:40.59:337,41,0	1/1:7,0:7:12.10:110,12,0	1/1:22,0:22:53.16:373,53,0	1/1:26,0:26:55.97:334,56,0	1/1:7,4:11:24.15:243,24,0	1/1:9,5:14:39.05:320,39,0	1/1:8,1:9:23.44:187,23,0	0/0:5,0:5:15.02:0,15,152	1/1:0,10:10:3.01:39,3,0	0/0:25,0:25:65.60:0,66,593	1/1:7,0:7:9.21:87,9,0	1/1:10,0:10:26.50:180,26,0	1/1:14,0:15:20.27:125,20,0	1/1:5,0:5:10.21:74,10,0	1/1:9,3:12:22.68:193,23,0	1/1:12,3:13:32:259,32,0	1/1:5,1:6:8.75:84,9,0	1/1:9,10:18:35.52:338,36,0	1/1:17,0:15:26:198,26,0	1/1:17,0:16:45.25:313,45,0	1/1:6,0:4:11.93:90,12,0
chr10	92749653	.	TTTTTTTTTC	T	2248.16	PASS	AB=0.925;AC=16;AF=0.286;AN=56;BaseQRankSum=8.034;DP=432;FS=4.906;HRun=0;HaplotypeScore=156.1173;InbreedingCoeff=-0.0775;MQ=59.55;MQ0=28;MQRankSum=-5.263;QD=9.73;ReadPosRankSum=4.123;VQSLOD=2.0754;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:38.65:0,39,691	0/0:10,0:9:27.09:0,27,914	0/1:45,0:11:41.72:42,0,166	0/0:46,0:19:32.12:0,32,546	0/1:10,5:15:27.85:225,0,28	0/0:14,0:14:33.07:0,33,522	0/0:13,0:13:18.49:0,18,326	0/0:18,0:15:1.77:0,2,328	0/1:10,0:10:18.59:43,0,19	1/1:22,3:24:9.70:452,10,0	0/1:18,9:27:31.48:589,0,31	0/0:9,0:9:2.55:0,3,72	0/1:14,0:13:18.03:18,0,179	0/0:7,0:7:12.97:0,13,105	0/0:6,0:6:15.05:0,15,601	0/0:9,0:9:3.01:0,3,84	0/0:24,0:24:57.18:0,57,2155	0/0:7,0:7:11.56:0,12,84	0/1:10,1:8:49.02:151,0,49	0/1:10,3:13:7.18:156,0,7	0/1:5,0:4:11.42:11,0,13	0/0:11,0:11:20.64:0,21,208	0/1:14,0:12:21.95:22,0,116	0/0:5,0:5:9.03:0,9,74	0/1:18,0:17:61.44:61,0,176	1/1:12,4:14:21.13:428,21,0	0/1:12,2:13:99:209,0,168	0/1:4,0:2:1.91:2,0,16
chr10	92749656	.	TTTTTTC	T	3117.45	PASS	AB=0.992;AC=30;AF=0.536;AN=56;BaseQRankSum=4.665;DP=410;FS=0.536;HRun=0;HaplotypeScore=126.7997;InbreedingCoeff=0.0795;MQ=57.03;MQ0=28;MQRankSum=-5.682;QD=9.33;ReadPosRankSum=3.276;VQSLOD=2.4709;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:20:5.04:5,0,200	0/0:10,0:9:27.09:0,27,632	0/1:39,0:8:24.38:24,0,49	0/1:46,0:19:7.50:8,0,277	0/1:12,0:12:55.48:146,0,55	0/0:13,0:13:24.70:0,25,229	0/0:13,0:13:12.65:0,13,85	1/1:20,0:17:22.51:183,23,0	0/1:10,0:10:26.58:27,0,51	1/1:20,0:19:17.54:355,18,0	0/1:27,0:27:79.71:392,0,80	1/1:8,0:8:16.15:241,16,0	1/1:11,2:12:24.73:344,25,0	0/1:6,0:6:4.97:40,0,5	0/0:5,0:5:15.05:0,15,429	0/0:9,0:9:3.01:0,3,41	0/0:22,0:22:54.17:0,54,1460	1/1:9,0:9:15.63:174,16,0	0/1:11,0:8:24.46:97,0,24	0/1:11,0:11:13.68:97,0,14	1/1:5,0:4:0.15:14,0,0	0/1:9,1:10:13.99:89,0,14	1/1:13,1:12:15.20:202,15,0	1/1:5,0:5:2.52:47,3,0	1/1:14,5:18:24.02:402,24,0	0/1:13,0:11:6.86:280,0,7	0/1:14,0:13:99:129,0,163	0/0:4,0:2:2.22:0,2,7
chr10	92749657	.	TTTTTC	T	2866.92	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=3.196;DP=407;FS=1.886;HRun=0;HaplotypeScore=121.1198;InbreedingCoeff=0.2620;MQ=56.86;MQ0=28;MQRankSum=-5.457;QD=9.56;ReadPosRankSum=2.476;VQSLOD=2.5214;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:20:23.84:24,0,119	0/0:10,0:9:27.09:0,27,553	0/1:39,0:8:0.01:0,0,48	0/0:45,0:19:13.29:0,13,204	0/1:11,0:11:9.76:173,0,10	0/0:13,0:13:22.08:0,22,161	0/1:13,0:13:11.42:11,0,21	1/1:19,1:17:16.51:134,17,0	0/1:10,0:10:12.79:51,0,13	1/1:19,0:18:18.99:312,19,0	0/1:27,0:27:28.01:405,0,28	1/1:7,1:8:18.06:255,18,0	1/1:11,2:12:20.26:257,20,0	1/1:7,0:7:7.44:67,7,0	0/0:5,0:5:15.05:0,15,366	0/0:8,0:8:3:0,3,27	0/0:22,0:22:55.72:0,56,1238	1/1:8,0:8:10.14:103,10,0	0/1:11,0:8:7.55:89,0,8	0/1:11,0:11:10.27:89,0,10	1/1:5,0:4:2.65:18,3,0	1/1:9,1:10:5.55:90,6,0	1/1:13,1:12:12.14:154,12,0	1/1:5,0:5:2.80:43,3,0	1/1:17,2:18:22.94:331,23,0	1/1:14,0:12:26.31:313,26,0	0/1:14,0:13:99:127,0,112	0/0:4,0:2:2.22:0,2,7
chr10	92749660	.	TTC	T	3535.15	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=5.315;DP=381;FS=18.720;HRun=0;HaplotypeScore=91.6198;InbreedingCoeff=0.8204;MQ=53.66;MQ0=26;MQRankSum=-6.077;QD=13.34;ReadPosRankSum=-1.102;VQSLOD=1.7464;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,3:20:46.77:397,47,0	0/0:11,0:10:29.69:0,30,328	0/0:35,0:7:4.98:0,5,47	0/0:41,0:16:17.03:0,17,145	1/1:10,0:10:19.07:149,19,0	1/1:13,0:13:18.84:158,19,0	1/1:11,3:14:20.83:159,21,0	1/1:17,0:14:29.09:219,29,0	1/1:10,0:10:21.42:128,21,0	1/1:19,0:18:32.20:243,32,0	1/1:24,0:24:50.97:361,51,0	1/1:8,1:9:16.52:144,17,0	1/1:11,0:10:24.60:177,25,0	1/1:6,0:6:15.20:84,15,0	0/0:6,0:6:18.03:0,18,218	1/1:8,0:8:2.98:22,3,0	0/0:23,0:23:47.75:0,48,708	1/1:7,0:7:12.92:95,13,0	1/1:9,0:6:14.92:114,15,0	1/1:11,0:11:12.52:89,13,0	1/1:3,0:2:5.92:39,6,0	1/1:10,0:10:14.40:101,14,0	1/1:10,1:9:15.11:96,15,0	1/1:4,0:4:5.94:41,6,0	1/1:12,6:17:32.94:284,33,0	1/1:11,0:10:29.66:229,30,0	1/1:14,0:13:22.66:201,23,0	1/1:4,0:2:2.03:5,2,0
chr10	92749661	.	TC	T	3589.11	PASS	AB=0.986;AC=48;AF=0.857;AN=56;BaseQRankSum=5.484;DP=361;FS=9.095;HRun=1;HaplotypeScore=82.0657;InbreedingCoeff=0.6533;MQ=51.06;MQ0=26;MQRankSum=-6.496;QD=11.18;ReadPosRankSum=-0.841;VQSLOD=0.7574;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,6:20:52:379,52,0	0/0:11,0:10:28.69:0,29,245	0/1:31,0:6:5.06:5,0,30	0/1:33,1:12:0.62:1,0,110	1/1:10,0:10:22.28:133,22,0	1/1:12,0:12:27.99:210,28,0	1/1:14,0:14:20.85:173,21,0	1/1:14,3:14:34.76:292,35,0	1/1:10,0:10:22:136,22,0	1/1:19,0:18:32.53:205,33,0	1/1:24,0:24:56.63:368,57,0	1/1:9,0:9:20.35:119,20,0	1/1:10,1:10:29.09:191,29,0	1/1:5,1:6:17.27:101,17,0	0/0:6,0:6:17.96:0,18,168	1/1:8,0:8:3.01:38,3,0	0/0:23,0:23:25.46:0,25,522	1/1:3,3:6:2.57:127,3,0	1/1:8,0:5:14.84:101,15,0	1/1:11,0:11:14.83:100,15,0	1/1:3,0:2:5.86:35,6,0	1/1:9,1:10:18.68:136,19,0	1/1:6,5:9:15.70:116,16,0	1/1:3,1:4:5.87:36,6,0	1/1:15,2:17:32.50:225,33,0	1/1:11,0:10:29.46:195,29,0	1/1:9,0:9:23.29:147,23,0	1/1:3,0:1:2.97:20,3,0
chr10	92749950	.	T	TG	2665.04	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-12.293;DP=647;FS=1.000;HRun=2;HaplotypeScore=114.6349;InbreedingCoeff=0.9971;MQ=86.01;MQ0=0;MQRankSum=-1.294;QD=35.53;ReadPosRankSum=0.892;VQSLOD=3.3564;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1210	0/0:7,0:7:21.07:0,21,260	0/0:24,0:24:42.53:0,43,664	0/0:24,0:24:37.90:0,38,515	0/0:22,0:22:60.18:0,60,729	1/1:0,27:27:72.24:1037,72,0	1/1:1,21:22:57.19:821,57,0	0/0:27,0:27:81.25:0,81,995	0/0:22,0:22:66.19:0,66,800	0/0:28,0:28:75.23:0,75,919	0/0:28,0:28:69.22:0,69,854	0/0:27,0:27:78.23:0,78,954	0/0:21,0:21:63.17:0,63,752	0/0:21,0:21:54.16:0,54,656	0/0:19,0:19:51.15:0,51,620	1/1:1,25:26:66.22:950,66,0	0/0:41,0:41:99:0,117,1419	0/0:20,0:20:60.16:0,60,728	0/0:19,0:19:57.17:0,57,696	0/0:19,0:19:54.15:0,54,645	0/0:23,0:23:63.20:0,63,781	0/0:22,0:22:63.19:0,63,772	0/0:21,0:21:57.17:0,57,694	0/0:17,0:17:51.14:0,51,618	0/0:21,0:20:57.18:0,57,705	0/0:30,0:30:87.26:0,87,1067	0/0:27,0:27:81.25:0,81,1004	0/0:7,0:7:21.07:0,21,260
chr10	92751517	.	A	AT	701.44	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.557;DP=563;FS=7.033;HRun=8;HaplotypeScore=64.8232;InbreedingCoeff=0.9948;MQ=79.80;MQ0=0;MQRankSum=-3.845;QD=25.98;ReadPosRankSum=2.206;VQSLOD=4.5266;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:27:69.21:796,69,0	0/0:9,0:9:24.01:0,24,220	0/0:13,0:13:23.99:0,24,219	0/0:20,0:19:30.82:0,31,244	0/0:34,0:34:99:0,99,895	0/0:30,0:30:81.04:0,81,741	0/0:19,0:19:56.97:0,57,509	0/0:34,0:34:77.10:0,77,701	0/0:16,0:16:36:0,36,326	0/0:23,0:23:66.03:0,66,602	0/0:20,0:20:57.03:0,57,522	0/0:16,0:16:45.02:0,45,408	0/0:16,0:16:48.01:0,48,434	0/0:25,0:25:63.02:0,63,572	0/0:20,0:20:60.03:0,60,549	0/0:24,0:24:63.02:0,63,573	0/0:15,0:15:45.02:0,45,412	0/0:12,0:12:36.02:0,36,329	0/0:18,0:18:48.01:0,48,436	0/0:23,0:23:60.02:0,60,549	0/0:19,0:19:51.02:0,51,467	0/0:16,0:16:41.98:0,42,377	0/0:16,0:16:38.96:0,39,347	0/0:25,0:25:72.02:0,72,654	0/0:19,0:19:54.01:0,54,488	0/0:17,0:17:51.03:0,51,467	0/0:26,0:26:62.98:0,63,569	0/0:11,0:11:33.02:0,33,302
chr10	92752300	.	A	AC	18167.74	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-12.049;DP=576;FS=0.000;HRun=0;HaplotypeScore=53.1370;InbreedingCoeff=0.9927;MQ=77.48;MQ0=0;MQRankSum=-3.297;QD=37.31;ReadPosRankSum=3.549;VQSLOD=4.6026;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:66.14:938,66,0	0/0:8,0:8:24.08:0,24,335	0/0:16,0:16:42.45:0,42,528	0/0:12,0:12:28.43:0,28,388	1/1:0,22:22:57.11:806,57,0	1/1:0,22:22:54.18:789,54,0	1/1:0,18:18:45.15:658,45,0	1/1:1,31:32:93.26:1314,93,0	1/1:0,27:27:66.22:965,66,0	1/1:0,24:24:69.19:967,69,0	1/1:0,13:13:33.11:482,33,0	1/1:1,20:21:45.15:658,45,0	1/1:0,24:24:59.89:877,60,0	1/1:2,25:27:69.23:1009,69,0	0/0:21,0:21:63.20:0,63,850	1/1:0,25:25:72.24:1053,72,0	0/0:32,0:32:93.24:0,93,1225	1/1:0,9:9:21.07:306,21,0	1/1:1,18:19:54.14:734,54,0	1/1:0,22:22:54.01:737,54,0	1/1:0,16:16:45.15:657,45,0	1/1:0,9:9:17.97:236,18,0	1/1:0,12:12:33.11:482,33,0	1/1:0,32:32:87.29:1272,87,0	1/1:1,19:20:42.14:605,42,0	1/1:1,29:30:84.20:1131,84,0	1/1:1,32:33:87.29:1270,87,0	1/1:0,5:5:15.05:219,15,0
chr10	92753005	.	AGACT	A	1305.56	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.405;DP=762;FS=2.675;HRun=0;HaplotypeScore=109.8216;InbreedingCoeff=0.9993;MQ=58.40;MQ0=0;MQRankSum=1.094;QD=31.08;ReadPosRankSum=2.397;VQSLOD=3.6543;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,41:38:75.26:1400,75,0	0/0:13,0:13:36.12:0,36,895	0/0:33,0:17:51.18:0,51,1309	0/0:27,0:16:48.16:0,48,1290	0/0:22,0:22:63.22:0,63,1682	0/0:23,0:23:51.18:0,51,1373	0/0:29,0:28:66.23:0,66,1775	0/0:32,0:30:78.25:0,78,2001	0/0:27,0:27:75.24:0,75,1953	0/0:22,0:22:66.23:0,66,1716	0/0:22,0:21:48.16:0,48,1284	0/0:27,0:27:78.27:0,78,2060	0/0:41,0:41:99:0,108,2895	0/0:35,0:35:93.31:0,93,2449	0/0:26,0:26:75.26:0,75,1976	0/0:25,0:25:72.20:0,72,1879	0/0:32,0:32:96.33:0,96,2506	0/0:33,0:33:93.32:0,93,2507	0/0:20,0:20:57.17:0,57,1476	0/0:23,0:23:60.21:0,60,1578	0/0:34,0:34:93.32:0,93,2479	0/0:24,0:24:66.23:0,66,1778	0/0:19,0:19:48.15:0,48,1239	0/0:36,0:36:99:0,99,2669	0/0:21,0:21:63.16:0,63,1537	0/0:29,0:29:87.28:0,87,2184	0/0:34,0:34:93.32:0,93,2489	0/0:11,0:11:30.08:0,30,810
chr10	92755923	.	TA	T	5622.97	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=13.854;DP=529;FS=8.264;HRun=6;HaplotypeScore=52.4800;InbreedingCoeff=0.9803;MQ=64.15;MQ0=0;MQRankSum=2.309;QD=26.52;ReadPosRankSum=1.067;VQSLOD=4.9816;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.28:0,87,1143	0/0:10,0:10:27.09:0,27,351	0/0:8,0:6:9.03:0,9,118	0/0:10,0:7:17.62:0,18,150	0/0:33,0:33:96.30:0,96,1250	1/1:1,19:20:57.14:613,57,0	1/1:1,11:12:24.06:258,24,0	1/1:4,24:28:72.16:765,72,0	0/0:12,0:12:36.12:0,36,473	0/0:27,0:27:69.22:0,69,908	0/0:31,0:31:90.28:0,90,1170	1/1:1,12:13:36.09:387,36,0	1/1:0,14:14:36.09:387,36,0	1/1:2,16:18:34.15:441,34,0	0/0:17,0:17:45.14:0,45,586	1/1:1,26:27:72.18:774,72,0	0/0:26,0:26:73.12:0,73,949	1/1:3,13:16:36.09:386,36,0	0/0:21,0:21:57.19:0,57,749	0/0:29,0:29:81.25:0,81,1049	0/0:7,0:7:21.07:0,21,276	1/1:0,6:6:18.05:193,18,0	1/1:1,24:25:60.04:645,60,0	1/1:1,6:7:9.02:97,9,0	1/1:2,24:26:63.16:677,63,0	0/0:23,0:23:69.22:0,69,908	0/0:18,0:18:54.16:0,54,695	0/0:15,0:15:36.59:0,37,473
chr10	92756262	.	TC	T	7889.68	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=16.114;DP=649;FS=3.523;HRun=2;HaplotypeScore=100.7391;InbreedingCoeff=0.9198;MQ=83.24;MQ0=0;MQRankSum=-2.878;QD=36.70;ReadPosRankSum=1.098;VQSLOD=5.0395;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.26:0,78,1133	0/0:10,0:10:30.10:0,30,450	0/0:24,0:24:69.22:0,69,1002	0/0:14,0:14:0.22:0,0,408	0/0:44,0:44:99:0,132,1937	0/0:30,0:30:87.28:0,87,1284	0/0:19,0:19:54.18:0,54,806	1/1:2,29:31:90.28:1157,90,0	0/0:19,0:19:57.19:0,57,852	0/0:27,0:27:81.27:0,81,1205	0/0:35,0:35:99:0,105,1547	1/1:0,18:18:51.17:662,51,0	1/1:0,33:33:93.30:1208,93,0	1/1:0,26:26:72.23:935,72,0	0/0:21,0:21:63.21:0,63,944	0/0:28,0:28:84.28:0,84,1240	0/0:11,0:11:33.11:0,33,494	1/1:1,14:15:0.19:500,0,0	0/0:14,0:14:39.13:0,39,585	0/0:21,0:21:63.21:0,63,942	0/0:25,0:25:72.24:0,72,1079	1/1:0,24:24:72.23:935,72,0	1/1:0,23:23:63.20:818,63,0	1/1:0,21:21:63.20:818,63,0	1/1:1,23:24:66.21:857,66,0	0/0:22,0:22:63.21:0,63,944	0/0:32,0:31:96.33:0,96,1434	0/0:10,0:10:30.10:0,30,450
chr10	92756481	.	GCA	G	15932.61	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=5.874;DP=703;FS=0.000;HRun=0;HaplotypeScore=97.7931;InbreedingCoeff=0.9854;MQ=72.25;MQ0=6;MQRankSum=-3.295;QD=27.66;ReadPosRankSum=6.452;VQSLOD=5.9494;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,19:25:45.14:558,45,0	1/1:4,18:22:54.17:670,54,0	0/0:36,0:31:58.95:0,59,859	0/0:26,0:25:42.60:0,43,648	1/1:3,37:40:99:1387,114,0	0/0:21,0:21:45.15:0,45,735	0/0:25,0:25:66.21:0,66,1039	1/1:8,30:38:92.78:1125,93,0	1/1:0,18:17:48.15:595,48,0	1/1:6,28:34:84.25:1030,84,0	1/1:6,19:25:51.12:612,51,0	1/1:4,15:19:38.95:460,39,0	1/1:6,30:36:84.26:1042,84,0	1/1:1,23:24:63.03:758,63,0	1/1:3,25:28:63.20:781,63,0	0/0:19,0:19:51.17:0,51,837	1/1:2,16:18:33.10:409,33,0	1/1:4,13:17:31.38:473,31,0	1/1:3,8:11:21.07:260,21,0	1/1:5,31:36:87.24:1063,87,0	1/1:6,25:30:60.19:744,60,0	1/1:9,18:27:51.16:632,51,0	1/1:5,23:28:63.20:781,63,0	1/1:4,14:17:33.10:409,33,0	1/1:4,14:18:39.12:484,39,0	1/1:5,29:34:87.25:1063,87,0	1/1:2,16:18:39.12:484,39,0	1/1:3,5:8:9.03:112,9,0
chr10	92758163	.	A	AAT	202.42	PASS	AB=0.944;AC=3;AF=0.054;AN=56;BaseQRankSum=3.996;DP=600;FS=7.283;HRun=0;HaplotypeScore=87.8063;InbreedingCoeff=0.5146;MQ=70.56;MQ0=1;MQRankSum=-0.747;QD=4.60;ReadPosRankSum=0.098;VQSLOD=1.2687;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,1:27:5.34:276,5,0	0/0:2,0:8:14.70:0,15,77	0/1:16,1:13:18.56:19,0,196	0/0:9,0:9:11.18:0,11,175	0/0:22,0:23:60.14:0,60,914	0/0:27,0:27:78.12:0,78,1196	0/0:14,0:16:48.10:0,48,642	0/0:43,0:44:99:0,120,1698	0/0:17,0:18:50.14:0,50,681	0/0:30,0:30:87.22:0,87,1290	0/0:17,0:18:44.34:0,44,674	0/0:25,0:26:74.43:0,74,1118	0/0:16,0:16:48.16:0,48,747	0/0:16,0:17:51.16:0,51,775	0/0:3,0:20:33.82:0,34,158	0/0:20,0:22:66.16:0,66,948	0/0:3,0:29:56.73:0,57,199	0/0:21,0:21:60.16:0,60,913	0/0:19,0:19:25.51:0,26,811	0/0:31,0:32:90.24:0,90,1299	0/0:25,0:25:72.10:0,72,944	0/0:12,0:12:36.11:0,36,555	0/0:21,0:21:63.17:0,63,940	0/0:22,0:22:66.14:0,66,962	0/0:15,0:16:42.07:0,42,559	0/0:28,0:28:84.05:0,84,1253	0/0:26,0:25:78.26:0,78,1224	0/0:10,0:10:27.05:0,27,419
chr10	92760806	.	CT	C	11472.07	PASS	AC=54;AF=1.000;AN=54;DP=560;FS=0.000;HRun=3;HaplotypeScore=444.3258;InbreedingCoeff=-0.0155;MQ=32.90;MQ0=0;QD=20.49;VQSLOD=1.4983;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:50.93:427,51,0	1/1:2,8:10:20.94:171,21,0	1/1:1,1:2:3.01:37,3,0	./.	1/1:1,30:31:47.91:393,48,0	1/1:1,23:24:68.95:582,69,0	1/1:2,21:23:56.95:481,57,0	1/1:4,31:35:92.96:819,93,0	1/1:1,13:14:38.97:329,39,0	1/1:5,17:22:50.98:445,51,0	1/1:2,25:27:71.74:576,72,0	1/1:1,14:15:41.92:348,42,0	1/1:4,27:31:85.72:672,86,0	1/1:5,29:34:83.88:697,84,0	1/1:2,25:27:74.89:623,75,0	1/1:1,23:24:68.91:582,69,0	1/1:2,15:17:41.84:336,42,0	1/1:1,2:3:6:53,6,0	1/1:3,16:19:47.96:419,48,0	1/1:6,18:24:44.96:386,45,0	1/1:2,9:11:23.95:198,24,0	1/1:3,27:30:77.86:640,78,0	1/1:1,21:22:53.92:442,54,0	1/1:1,5:6:8.99:74,9,0	1/1:3,19:22:44.82:363,45,0	1/1:7,26:33:83.82:711,84,0	1/1:2,27:29:74.96:639,75,0	1/1:1,1:2:3:27,3,0
chr10	92760811	.	CA	C	13830.75	PASS	AB=1.000;AC=53;AF=0.981;AN=54;DP=523;FS=0.000;HRun=2;HaplotypeScore=423.6584;InbreedingCoeff=0.3807;MQ=32.92;MQ0=0;QD=26.45;VQSLOD=2.1896;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:66.09:655,66,0	1/1:0,8:8:21.02:200,21,0	0/1:2,0:2:0:0,0,0	./.	1/1:0,32:32:63.04:591,63,0	1/1:0,23:23:69.03:624,69,0	1/1:0,23:23:66.06:621,66,0	1/1:0,34:34:99:1002,102,0	1/1:0,14:14:42.03:388,42,0	1/1:0,17:17:51.06:490,51,0	1/1:0,25:25:69.01:621,69,0	1/1:0,14:14:42.03:390,42,0	1/1:2,29:31:92.32:849,92,0	1/1:0,29:29:87.05:801,87,0	1/1:0,26:26:78.05:722,78,0	1/1:0,24:24:72.06:677,72,0	1/1:0,19:19:51.05:504,51,0	1/1:0,2:2:6.01:57,6,0	1/1:0,16:16:48.07:465,48,0	1/1:0,18:18:47.95:429,48,0	1/1:0,9:9:21.01:190,21,0	1/1:0,28:28:81.04:742,81,0	1/1:0,21:21:56.99:510,57,0	1/1:0,5:5:9:80,9,0	1/1:0,20:20:60.09:607,60,0	1/1:0,28:28:84.08:797,84,0	1/1:0,29:29:84.08:790,84,0	1/1:0,1:1:3:28,3,0
chr10	92763364	.	C	CCATGGG	9320.65	PASS	AB=0.889;AC=21;AF=0.375;AN=56;BaseQRankSum=16.428;DP=815;FS=220.261;HRun=0;HaplotypeScore=267.4455;InbreedingCoeff=-0.6000;MQ=66.53;MQ0=0;MQRankSum=-14.824;QD=14.43;ReadPosRankSum=1.808;VQSLOD=-0.3923;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:55,0:55:58.24:58,0,3571	0/1:11,2:13:99:289,0,694	0/0:25,0:23:65.56:0,66,1374	0/0:27,0:26:73.41:0,73,1410	0/1:24,11:35:99:1232,0,999	0/1:31,1:31:99:113,0,1797	0/1:21,1:22:89.34:89,0,1153	0/0:32,0:32:87.28:0,87,2043	0/1:20,3:23:99:259,0,1348	0/1:29,8:40:99:633,0,1539	0/1:20,4:24:99:280,0,909	0/1:21,2:23:99:259,0,1386	0/1:40,2:43:99:550,0,2337	0/1:31,2:33:99:270,0,1972	0/1:27,2:29:99:138,0,1737	0/1:21,4:25:99:363,0,1477	0/0:25,0:25:75.26:0,75,1837	0/0:11,0:11:30.10:0,30,738	0/0:22,0:21:63.20:0,63,1498	0/1:39,13:52:99:1411,0,1789	0/0:27,0:27:81.24:0,81,1885	0/1:27,10:37:99:1008,0,1294	0/1:25,5:30:99:539,0,961	0/1:18,1:19:58.28:58,0,1126	0/1:25,6:30:99:798,0,1241	0/1:31,4:35:99:336,0,2110	0/1:27,5:32:99:564,0,1579	0/1:13,0:13:70.53:71,0,832
chr10	92772073	.	TTCC	T	2596.72	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.580;DP=842;FS=3.843;HRun=0;HaplotypeScore=113.3056;InbreedingCoeff=0.9999;MQ=91.31;MQ0=0;MQRankSum=-2.697;QD=33.72;ReadPosRankSum=3.262;VQSLOD=3.8711;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,2578	1/1:2,12:14:33.07:502,33,0	0/0:36,0:36:84.29:0,84,1785	0/0:32,0:32:86.95:0,87,1764	0/0:25,0:25:75.26:0,75,1633	0/0:37,0:37:99:0,105,2256	0/0:28,0:28:69.24:0,69,1523	0/0:31,0:31:90.30:0,90,1949	0/0:31,0:31:87.30:0,87,1920	0/0:39,0:39:99:0,108,2374	0/0:20,0:20:57.20:0,57,1259	0/0:32,0:32:84.29:0,84,1849	0/0:42,0:42:99:0,120,2642	0/0:34,0:34:99:0,99,2171	1/1:4,35:39:90.26:1418,90,0	0/0:35,0:35:99:0,99,2179	1/1:1,23:24:51.17:820,51,0	0/0:18,0:18:54.19:0,54,1184	0/0:21,0:21:57.18:0,57,1149	0/0:41,0:41:99:0,111,2439	0/0:30,0:30:90.31:0,90,1948	0/0:34,0:34:93.32:0,93,2052	0/0:35,0:35:99:0,105,2310	0/0:29,0:29:81.28:0,81,1788	0/0:28,0:28:84.29:0,84,1855	0/0:33,0:33:99:0,99,2186	0/0:23,0:23:60.21:0,60,1302	0/0:12,0:12:36.12:0,36,784
chr10	92779640	.	G	GA	1881.65	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-11.569;DP=606;FS=4.666;HRun=9;HaplotypeScore=67.5733;InbreedingCoeff=0.9777;MQ=75.45;MQ0=0;MQRankSum=-1.195;QD=26.50;ReadPosRankSum=0.588;VQSLOD=4.1791;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:47.96:0,48,416	1/1:1,15:16:42.11:465,42,0	0/0:13,0:14:31.92:0,32,250	0/0:15,0:14:20.80:0,21,165	0/0:33,0:33:83.95:0,84,724	0/0:29,1:30:41.77:0,42,588	0/0:16,0:16:38.97:0,39,335	0/0:32,0:33:64.83:0,65,550	0/0:15,0:15:32.94:0,33,277	0/0:30,0:30:77.97:0,78,677	0/0:31,0:31:71.94:0,72,625	0/0:17,0:17:47.99:0,48,417	0/0:15,0:15:44.97:0,45,387	0/0:17,0:17:41.97:0,42,365	1/1:2,33:35:90.24:996,90,0	0/0:22,0:22:56.95:0,57,489	1/1:2,18:20:51.14:564,51,0	0/0:8,0:8:17.97:0,18,151	0/0:16,0:17:10.84:0,11,311	0/0:30,0:30:83.96:0,84,725	0/0:7,0:7:18:0,18,156	0/0:22,0:22:56.98:0,57,495	0/0:27,0:28:76.99:0,77,653	0/0:10,0:10:23.99:0,24,208	0/0:30,0:30:77.95:0,78,677	0/0:24,0:24:65.97:0,66,570	0/0:29,0:29:74.96:0,75,650	0/0:22,0:22:59.98:0,60,521
chr10	92780194	.	C	CGT	4057.93	PASS	AB=0.844;AC=43;AF=0.768;AN=56;BaseQRankSum=-0.380;DP=544;FS=2.944;HRun=0;HaplotypeScore=136.5036;InbreedingCoeff=0.3086;MQ=60.38;MQ0=8;MQRankSum=2.351;QD=8.69;ReadPosRankSum=3.339;VQSLOD=3.6227;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:14.97:132,15,0	1/1:9,0:9:1.22:3,1,0	0/0:30,0:15:9.02:0,9,91	0/0:30,0:20:17.08:0,17,205	1/1:17,0:17:3.92:11,4,0	1/1:28,0:28:8.66:58,9,0	0/1:16,0:16:0:0,0,0	1/1:21,16:38:10.74:635,11,0	1/1:3,0:13:5.84:52,6,0	1/1:17,0:16:14.32:101,14,0	1/1:3,0:14:7.24:55,7,0	0/1:13,4:17:4.25:229,0,4	1/1:12,9:20:2.58:566,3,0	1/1:7,4:11:14.79:196,15,0	1/1:14,0:12:1.82:5,2,0	1/1:17,0:16:3.01:40,3,0	1/1:10,0:21:6:52,6,0	0/1:8,8:16:8.51:356,0,9	1/1:9,0:8:5.28:28,5,0	1/1:27,0:25:8.58:58,9,0	0/0:16,0:15:1.82:0,2,5	1/1:8,5:13:21.51:297,22,0	0/1:11,19:29:2.23:339,0,2	1/1:7,14:21:30.10:454,30,0	0/1:21,6:27:3.20:362,0,3	0/1:19,0:19:0:1,0,0	1/1:6,0:21:2.38:26,2,0	0/1:5,0:5:0:0,0,0
chr10	92780640	.	A	ACT	30098.88	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-10.265;DP=680;FS=4.748;HRun=0;HaplotypeScore=68.9831;InbreedingCoeff=0.9956;MQ=94.96;MQ0=3;MQRankSum=-12.123;QD=48.86;ReadPosRankSum=4.780;VQSLOD=6.0439;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:29:72.25:1329,72,0	1/1:0,8:8:24.08:449,24,0	0/0:25,0:25:72.24:0,72,1054	0/0:39,0:39:99:0,102,1461	1/1:1,29:31:69.23:1267,69,0	1/1:1,30:30:81.28:1517,81,0	1/1:0,19:20:54.19:1011,54,0	1/1:0,29:29:87.30:1630,87,0	1/1:1,23:24:63.22:1180,63,0	1/1:2,36:38:99:1917,108,0	1/1:1,8:11:24.08:444,24,0	1/1:0,22:23:60.21:1124,60,0	1/1:1,32:33:90.31:1684,90,0	1/1:4,26:30:66.23:1236,66,0	1/1:0,30:30:84.29:1573,84,0	1/1:1,20:21:54.19:1012,54,0	1/1:1,18:19:51.17:955,51,0	1/1:1,15:15:39.13:730,39,0	1/1:1,18:19:57.17:1007,57,0	1/1:0,13:13:39.13:730,39,0	1/1:1,29:30:78.27:1461,78,0	1/1:1,14:16:33.11:618,33,0	1/1:0,25:25:69.24:1291,69,0	1/1:1,23:24:63.22:1180,63,0	1/1:2,17:19:42.14:786,42,0	1/1:0,36:36:99:2004,108,0	1/1:1,31:32:84.29:1572,84,0	1/1:0,7:7:21.07:393,21,0
chr10	92780902	.	C	CT	7922.46	PASS	AB=0.603;AC=49;AF=0.875;AN=56;BaseQRankSum=-4.362;DP=455;FS=1.629;HRun=10;HaplotypeScore=71.5286;InbreedingCoeff=0.3038;MQ=66.47;MQ0=1;MQRankSum=-0.149;QD=17.84;ReadPosRankSum=2.473;VQSLOD=5.6175;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:23:44.23:493,44,0	1/1:3,2:11:20.39:142,20,0	0/0:8,0:8:11.71:0,12,84	0/0:3,0:3:1.22:0,1,3	1/1:7,17:24:50.31:525,50,0	1/1:4,9:13:27.07:288,27,0	1/1:4,20:26:29.12:471,29,0	1/1:10,12:23:17.25:361,17,0	0/1:5,7:12:25.23:168,0,25	1/1:9,11:21:2.49:282,2,0	1/1:5,10:16:20.89:206,21,0	1/1:4,13:18:26.22:313,26,0	1/1:3,16:19:26.48:487,26,0	0/1:4,9:12:40.84:223,0,41	1/1:3,0:10:17.11:87,17,0	1/1:1,12:13:11.45:327,11,0	1/1:6,1:22:28.61:160,29,0	1/1:7,12:19:7.59:321,8,0	0/1:5,12:16:13.06:277,0,13	1/1:4,14:17:27.03:276,27,0	1/1:3,4:7:9.02:96,9,0	1/1:1,15:16:28.73:431,29,0	1/1:7,15:20:11.92:328,12,0	1/1:2,7:9:18.52:193,19,0	1/1:3,15:19:23.10:419,23,0	1/1:6,10:17:10.02:273,10,0	1/1:5,19:24:26.49:487,26,0	1/1:0,10:10:27.07:288,27,0
chr10	92780983	.	C	CA	2663.51	PASS	AB=0.988;AC=36;AF=0.667;AN=54;BaseQRankSum=4.094;DP=313;FS=24.366;HRun=2;HaplotypeScore=50.0964;InbreedingCoeff=0.3037;MQ=48.40;MQ0=16;MQRankSum=-1.946;QD=11.19;ReadPosRankSum=-0.593;VQSLOD=0.1186;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,4:15:24.97:209,25,0	0/0:5,0:5:12.04:0,12,148	0/0:20,0:7:11.14:0,11,155	0/0:11,0:3:6.02:0,6,73	1/1:9,1:10:17.72:114,18,0	1/1:2,4:5:6.02:81,6,0	1/1:12,19:26:21.94:429,22,0	1/1:18,0:18:33.67:223,34,0	1/1:6,1:7:17.73:157,18,0	1/1:7,2:9:17.67:133,18,0	1/1:2,0:2:6.02:71,6,0	0/1:10,0:10:0.95:33,0,1	0/1:7,0:7:9.80:16,0,10	0/1:13,0:12:7.28:26,0,7	0/0:13,0:13:36.11:0,36,434	1/1:2,8:10:24.07:321,24,0	0/0:21,0:21:57.18:0,57,703	1/1:9,4:13:4.07:205,4,0	0/1:8,1:8:3.67:106,0,4	1/1:10,5:14:14.94:148,15,0	./.	0/1:12,0:12:10.19:39,0,10	0/1:11,0:11:9.03:9,0,67	0/1:10,0:10:24.19:39,0,24	0/1:10,0:9:16.88:17,0,34	1/1:10,3:13:28.21:356,28,0	1/1:4,0:3:6.01:60,6,0	1/1:1,1:2:3.90:45,4,0
chr10	92780985	.	A	AAC	2341.05	PASS	AB=1.000;AC=31;AF=0.574;AN=54;BaseQRankSum=3.060;DP=314;FS=25.962;HRun=0;HaplotypeScore=59.1164;InbreedingCoeff=0.4389;MQ=51.78;MQ0=15;MQRankSum=-3.301;QD=12.19;ReadPosRankSum=-0.299;VQSLOD=1.2733;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:18.18:163,18,0	0/0:5,0:5:12.04:0,12,193	0/0:24,0:11:8.16:0,8,223	0/0:12,0:4:9.02:0,9,119	1/1:6,2:10:17.80:130,18,0	0/1:7,0:6:2.46:42,0,2	1/1:28,2:26:2.26:302,2,0	1/1:17,0:17:26.64:193,27,0	1/1:1,6:7:18.06:295,18,0	1/1:6,1:8:17.88:156,18,0	1/1:0,1:2:5.51:55,6,0	0/1:10,0:10:0.78:1,0,21	0/0:7,0:7:1.75:0,2,29	0/0:15,0:14:0.52:0,1,40	0/0:13,0:13:36.12:0,36,585	1/1:10,0:10:23.60:201,24,0	0/0:21,0:21:60.19:0,60,947	1/1:12,0:13:4.01:169,4,0	0/1:9,0:8:16.20:96,0,16	1/1:13,0:12:13.96:99,14,0	./.	0/1:11,0:11:21.30:21,0,32	0/0:9,0:9:2.09:0,2,102	0/1:9,0:9:16.74:17,0,45	0/0:11,0:10:3.57:0,4,65	1/1:6,7:13:28.94:407,29,0	1/1:1,3:4:6.02:117,6,0	1/1:1,0:2:6:52,6,0
chr10	92782052	.	G	GA	18898.93	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.728;DP=497;FS=0.717;HRun=0;HaplotypeScore=67.0524;InbreedingCoeff=0.9637;MQ=81.71;MQ0=0;MQRankSum=-8.997;QD=40.73;ReadPosRankSum=5.195;VQSLOD=5.2464;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:31:75.26:1191,75,0	1/1:1,6:7:18.06:287,18,0	0/0:17,0:17:47.97:0,48,616	0/0:16,0:15:39.09:0,39,510	1/1:0,23:23:60.12:904,60,0	1/1:0,18:18:39.13:611,39,0	1/1:0,28:28:69.24:1100,69,0	1/1:1,32:33:96.31:1492,96,0	1/1:0,12:12:27.09:428,27,0	1/1:0,12:12:36.12:572,36,0	1/1:0,16:16:48.16:767,48,0	1/1:1,10:11:30.10:473,30,0	1/1:1,12:13:30.10:463,30,0	1/1:1,17:18:48.16:762,48,0	1/1:0,18:18:42.14:633,42,0	1/1:1,8:9:24.08:383,24,0	1/1:0,27:27:69.24:1103,69,0	1/1:0,22:21:54.18:862,54,0	1/1:1,17:18:51.17:798,51,0	1/1:0,21:21:57.19:911,57,0	1/1:0,16:16:39.13:623,39,0	1/1:1,9:10:24.08:381,24,0	1/1:0,15:15:36:575,36,0	1/1:0,23:23:57.19:906,57,0	1/1:0,16:16:42.14:669,42,0	1/1:0,19:19:54.16:812,54,0	1/1:0,25:25:66.11:1051,66,0	1/1:0,3:3:9.03:144,9,0
chr10	92782237	.	GGTGTGTGTGTGTGTGTATGTGTGTGT	G	1884.73	PASS	AB=0.538;AC=5;AF=0.089;AN=56;BaseQRankSum=4.281;DP=528;FS=1.062;HRun=0;HaplotypeScore=294.2120;InbreedingCoeff=0.5963;MQ=56.19;MQ0=16;MQRankSum=-2.719;QD=42.83;ReadPosRankSum=2.096;VQSLOD=2.3397;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:69.66:0,70,5056	1/1:2,3:6:8.81:585,9,0	0/0:16,0:5:8.70:0,9,95	0/0:33,0:13:2.99:0,3,245	0/0:24,0:24:29.71:0,30,947	0/0:24,0:23:33.05:0,33,1736	0/0:19,0:18:30.96:0,31,1769	0/0:24,0:24:37.62:0,38,2403	0/0:11,0:11:24.08:0,24,1649	0/0:19,0:19:51.14:0,51,2777	0/0:17,0:17:30.07:0,30,1427	0/0:16,0:15:29.77:0,30,1063	0/0:23,0:22:42.12:0,42,3441	0/0:18,0:16:20.79:0,21,1106	1/1:3,14:17:18.53:1225,19,0	0/0:17,0:16:26.99:0,27,1405	0/1:3,18:21:99:195,0,151	0/0:23,0:23:45.12:0,45,2721	0/0:21,0:20:48.10:0,48,3093	0/0:13,0:13:7.95:0,8,658	0/0:14,0:14:23.98:0,24,1158	0/0:16,0:16:24.07:0,24,1229	0/0:14,0:14:15.04:0,15,796	0/0:15,0:13:5.55:0,6,142	0/0:21,0:19:21.04:0,21,1390	0/0:27,0:27:63.19:0,63,3895	0/0:15,0:16:27.56:0,28,2221	0/0:5,0:5:9.03:0,9,522
chr10	92782254	.	A	ATGTGTGTG	3390.08	PASS	AB=0.794;AC=41;AF=0.820;AN=50;BaseQRankSum=-5.460;DP=577;FS=0.000;HRun=0;HaplotypeScore=158.7945;InbreedingCoeff=0.3376;MQ=49.06;MQ0=25;MQRankSum=2.199;QD=7.09;ReadPosRankSum=-2.880;VQSLOD=1.9429;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:41:30.68:251,31,0	0/0:5,0:5:6.20:0,6,113	./.	./.	0/1:16,0:29:0.02:0,0,0	1/1:20,0:19:3.48:44,3,0	1/1:23,0:22:12.91:164,13,0	1/1:36,0:33:21.60:144,22,0	1/1:13,0:12:12.50:198,12,0	1/1:21,0:21:9.48:97,9,0	1/1:10,0:21:3.01:104,3,0	1/1:17,0:16:2.98:22,3,0	1/1:22,0:20:32.98:510,33,0	1/1:10,10:18:6.02:222,6,0	0/0:15,0:14:18.06:0,18,336	1/1:11,1:22:6.02:209,6,0	0/0:21,0:21:3.01:0,3,56	0/1:15,9:27:4.57:299,0,5	1/1:22,0:21:14.13:228,14,0	1/1:13,0:13:3.01:123,3,0	0/1:17,0:16:31.77:64,0,32	1/1:8,1:23:3.01:104,3,0	./.	1/1:19,0:17:2.82:102,3,0	1/1:19,0:17:11.05:176,11,0	1/1:25,0:24:11.26:162,11,0	1/1:8,0:19:8.72:146,9,0	1/1:4,0:4:2.98:22,3,0
chr10	92782343	.	ATTATAG	A	402.46	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.629;DP=474;FS=3.411;HRun=0;HaplotypeScore=100.5617;InbreedingCoeff=0.9123;MQ=86.97;MQ0=1;MQRankSum=-4.267;QD=26.83;ReadPosRankSum=0.887;VQSLOD=3.0733;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,12:14:21.07:495,21,0	0/0:4,0:4:9.03:0,9,320	0/0:16,0:16:45.15:0,45,1468	0/0:19,0:19:55.40:0,55,1665	0/0:20,0:20:57.19:0,57,1932	0/0:20,0:20:57.20:0,57,2032	0/0:14,0:14:39.13:0,39,1295	0/0:37,0:36:96.32:0,96,3231	0/0:12,0:12:36.12:0,36,1283	0/0:17,0:17:51.17:0,51,1712	0/0:17,0:17:51.18:0,51,1784	0/0:14,0:14:42.14:0,42,1481	0/0:20,0:20:60.21:0,60,2080	0/0:14,0:14:36.11:0,36,1185	0/0:15,0:15:36.12:0,36,1248	0/0:11,0:11:27.09:0,27,963	0/0:18,0:18:48.16:0,48,1690	0/0:18,0:18:45.15:0,45,1574	0/0:23,0:22:66.23:0,66,2290	0/0:16,0:16:48.16:0,48,1684	0/0:26,0:25:72.25:0,72,2496	0/0:13,0:13:27.09:0,27,889	0/0:18,0:18:45.15:0,45,1567	0/0:18,0:18:41.71:0,42,1431	0/0:20,0:20:60.21:0,60,2123	0/0:16,0:16:42.14:0,42,1473	0/0:19,0:19:57.20:0,57,2031	0/0:4,0:4:12.04:0,12,368
chr10	92782493	.	TA	T	2228.09	PASS	AB=0.762;AC=20;AF=0.357;AN=56;BaseQRankSum=-6.014;DP=451;FS=0.423;HRun=12;HaplotypeScore=60.3645;InbreedingCoeff=0.8583;MQ=69.10;MQ0=1;MQRankSum=-0.930;QD=13.03;ReadPosRankSum=2.751;VQSLOD=3.8205;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:22:32.85:255,33,0	0/0:3,0:7:11.83:0,12,58	0/1:15,1:14:1.92:2,0,138	0/0:8,0:5:5.38:0,5,38	0/0:22,0:24:44.87:0,45,417	0/0:19,0:19:48.10:0,48,487	0/0:13,0:13:39.04:0,39,380	1/1:11,15:26:49.37:379,49,0	0/0:15,0:15:39.03:0,39,385	0/0:15,0:15:33.01:0,33,317	0/0:18,1:19:21.87:0,22,394	1/1:3,6:9:20.90:162,21,0	1/1:1,14:15:38.84:302,39,0	1/1:2,14:16:38.84:302,39,0	0/0:2,0:12:22.04:0,22,109	0/0:17,0:19:41.74:0,42,384	0/0:3,0:24:51.30:0,51,273	1/1:0,7:8:9.38:148,9,0	0/0:24,1:25:30.61:0,31,445	0/0:20,0:20:42.05:0,42,405	0/0:14,0:14:26.88:0,27,301	1/1:2,14:16:10.32:230,10,0	0/1:4,10:14:1.19:139,0,1	1/1:0,16:17:46.87:354,47,0	1/1:0,12:12:20.90:163,21,0	0/0:15,0:16:38.91:0,39,375	0/0:14,0:15:41.86:0,42,385	0/0:13,0:15:7.60:0,8,218
chr10	92782761	.	CG	C	1486.11	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.106;DP=483;FS=0.609;HRun=2;HaplotypeScore=79.3981;InbreedingCoeff=0.9711;MQ=56.55;MQ0=8;MQRankSum=-1.862;QD=34.56;ReadPosRankSum=2.061;VQSLOD=4.0686;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.27:0,93,1368	1/1:0,6:6:18.06:233,18,0	0/0:22,2:6:15.05:0,15,204	0/0:22,0:12:18.66:0,19,280	0/0:25,0:25:66.22:0,66,972	0/0:21,0:21:45.14:0,45,652	0/0:18,0:18:54.18:0,54,808	0/0:30,0:30:78.20:0,78,1120	0/0:8,0:8:21.07:0,21,314	0/0:7,0:7:21.07:0,21,311	0/0:15,0:15:42.13:0,42,597	0/0:19,0:19:51.17:0,51,764	0/0:12,0:12:36.12:0,36,520	0/0:15,0:15:39.13:0,39,584	1/1:0,17:17:51.16:656,51,0	0/0:19,0:19:36.12:0,36,539	1/1:0,20:20:57.19:739,57,0	0/0:21,0:21:39.12:0,39,545	0/0:13,0:13:39.13:0,39,568	0/0:17,0:17:51.17:0,51,748	0/0:9,0:9:12.04:0,12,180	0/0:7,0:7:18.06:0,18,270	0/0:12,0:12:36.12:0,36,538	0/0:22,0:22:45.10:0,45,629	0/0:12,0:12:21.07:0,21,315	0/0:20,0:20:57.19:0,57,853	0/0:19,0:19:57.19:0,57,839	0/0:18,0:16:42.14:0,42,627
chr10	92782779	.	G	GAA	3898.79	PASS	AB=0.816;AC=48;AF=0.857;AN=56;BaseQRankSum=-0.384;DP=620;FS=5.368;HRun=17;HaplotypeScore=102.8899;InbreedingCoeff=0.4721;MQ=54.19;MQ0=6;MQRankSum=-4.299;QD=7.26;ReadPosRankSum=0.134;VQSLOD=0.6755;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:40:1.76:0,2,150	1/1:8,0:8:14.91:114,15,0	0/0:28,0:9:11.64:0,12,73	0/0:15,0:7:3.08:0,3,21	1/1:33,2:35:26.82:242,27,0	1/1:27,0:27:16.58:128,17,0	0/1:11,0:11:4.49:34,0,4	1/1:35,2:39:37.63:277,38,0	1/1:4,9:13:5.81:43,6,0	1/1:13,1:14:15.65:112,16,0	1/1:18,0:18:30.77:231,31,0	1/1:22,0:22:35.44:311,35,0	1/1:17,0:17:19.54:166,20,0	1/1:16,0:16:15.93:105,16,0	1/1:15,1:25:31.74:217,32,0	0/1:10,14:24:11.96:24,0,12	1/1:25,0:30:48.57:334,49,0	1/1:8,0:20:8.36:65,8,0	1/1:11,0:20:36.79:268,37,0	1/1:28,0:29:36.15:278,36,0	1/1:4,0:13:8.92:64,9,0	1/1:5,0:10:7.16:42,7,0	1/1:17,1:18:9.91:180,10,0	1/1:15,0:27:5.16:40,5,0	1/1:9,15:24:11.19:78,11,0	1/1:18,1:19:25.51:194,26,0	1/1:29,2:32:22.05:258,22,0	1/1:16,2:23:14.02:93,14,0
chr10	92782782	.	A	AAAG	1363.44	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=4.961;DP=609;FS=0.000;HRun=0;HaplotypeScore=119.2574;InbreedingCoeff=0.4278;MQ=53.97;MQ0=5;MQRankSum=-1.608;QD=9.81;ReadPosRankSum=6.091;VQSLOD=2.4583;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:97.63:0,98,1031	1/1:4,4:8:1.25:269,1,0	0/0:27,0:9:23.34:0,23,205	0/0:15,0:8:10.66:0,11,94	0/0:34,0:33:63.31:0,63,456	0/0:28,0:28:3.41:0,3,195	0/0:9,0:9:14.93:0,15,133	0/1:37,0:37:2.27:2,0,319	0/0:13,0:13:10.56:0,11,62	0/0:16,0:16:32.76:0,33,244	0/0:17,0:17:17.47:0,17,206	0/1:21,0:21:13.64:14,0,108	0/0:15,0:15:17.02:0,17,169	0/0:14,0:14:1.57:0,2,131	1/1:18,5:23:37.50:497,37,0	0/0:23,0:23:25.99:0,26,231	1/1:28,3:31:55.77:708,56,0	0/0:20,0:20:3.11:0,3,102	0/1:19,0:19:13.09:13,0,168	0/0:30,0:30:48.18:0,48,380	0/0:12,0:12:4.26:0,4,19	0/0:9,0:9:12.67:0,13,84	0/0:21,0:20:32.69:0,33,249	0/0:24,0:24:25.09:0,25,188	0/0:25,0:25:14.24:0,14,80	0/0:20,0:20:36.99:0,37,274	0/0:31,0:31:64.79:0,65,457	0/0:24,0:23:26.88:0,27,325
chr10	92784626	.	AC	A	5441.25	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=7.620;DP=575;FS=0.330;HRun=7;HaplotypeScore=74.4122;InbreedingCoeff=0.9223;MQ=74.59;MQ0=0;MQRankSum=-0.340;QD=25.19;ReadPosRankSum=0.495;VQSLOD=5.2321;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:69.17:0,69,840	0/0:8,0:8:18.06:0,18,226	0/1:13,0:13:13.13:13,0,237	0/0:13,0:14:28.87:0,29,325	0/0:24,0:24:69.22:0,69,868	0/0:21,0:21:63.20:0,63,792	0/0:15,0:15:45.14:0,45,566	1/1:5,24:29:72.11:717,72,0	0/0:17,0:17:48.15:0,48,604	0/0:26,0:26:72.23:0,72,903	0/0:31,0:31:90.27:0,90,1115	1/1:0,22:22:60.14:611,60,0	1/1:1,15:16:48.11:490,48,0	1/1:3,27:30:75.16:764,75,0	0/0:23,0:23:63.20:0,63,792	0/0:13,0:13:36.12:0,36,453	0/0:31,0:30:93.30:0,93,1169	1/1:0,18:18:48.11:489,48,0	0/0:16,0:16:45.14:0,45,558	0/0:28,0:28:78.25:0,78,978	0/0:8,0:8:24.06:0,24,289	1/1:1,15:16:45.10:459,45,0	1/1:1,25:26:69.16:704,69,0	1/1:1,19:20:48.11:490,48,0	1/1:0,26:26:69.16:704,69,0	0/0:14,0:14:42.13:0,42,526	0/0:26,0:26:66.18:0,66,793	0/0:16,0:16:48.15:0,48,603
chr10	92785831	.	G	GA	1816.44	PASS	AB=0.728;AC=27;AF=0.482;AN=56;BaseQRankSum=-0.715;DP=563;FS=4.274;HRun=14;HaplotypeScore=66.6033;InbreedingCoeff=0.1845;MQ=54.62;MQ0=25;MQRankSum=0.502;QD=4.99;ReadPosRankSum=3.246;VQSLOD=2.1571;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:35,9:43:40.27:40,0,343	0/1:7,5:12:43.96:129,0,44	0/0:20,0:6:8.25:0,8,42	0/0:13,0:2:2.12:0,2,17	0/0:27,0:27:33.37:0,33,283	0/1:6,11:16:3.39:91,0,3	0/1:8,8:14:0.14:103,0,0	1/1:16,1:17:15.52:80,16,0	0/0:12,1:14:6.14:0,6,128	0/0:16,0:13:17.60:0,18,114	0/1:13,2:14:52.06:52,0,74	1/1:14,0:15:9.36:87,9,0	1/1:8,15:21:9.85:127,10,0	1/1:4,9:13:3:26,3,0	1/1:2,12:16:20.68:160,21,0	0/1:5,8:13:22.93:64,0,23	1/1:25,11:33:53.31:540,53,0	1/1:10,17:25:8.87:68,9,0	0/1:23,0:21:44.40:44,0,98	0/0:30,0:29:66.74:0,67,398	0/1:5,1:5:14.02:14,0,46	0/1:6,7:13:24.44:42,0,24	0/1:7,12:19:8.27:163,0,8	1/1:3,11:13:12:105,12,0	0/1:7,11:18:11.21:65,0,11	0/0:24,0:22:29.84:0,30,189	0/0:17,7:24:32.95:0,33,200	0/0:25,5:28:21.08:0,21,230
chr10	92786317	.	T	TC	535.41	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.767;DP=574;FS=8.788;HRun=9;HaplotypeScore=73.6170;InbreedingCoeff=0.9020;MQ=72.51;MQ0=0;MQRankSum=-2.224;QD=19.83;ReadPosRankSum=-0.791;VQSLOD=3.6484;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,21:27:57.15:630,57,0	0/0:6,0:6:11.97:0,12,100	0/0:20,0:18:18.73:0,19,134	0/0:18,0:15:19.61:0,20,151	0/0:25,0:25:52.99:0,53,487	0/0:12,0:12:23.98:0,24,208	0/0:19,0:19:47.96:0,48,412	0/0:31,0:32:34.96:0,35,289	0/0:15,0:15:41.99:0,42,364	0/0:23,0:23:56.98:0,57,494	0/0:15,0:15:38.96:0,39,334	0/0:18,0:18:44.95:0,45,385	0/0:15,1:16:8.81:0,9,304	0/0:20,0:20:47.93:0,48,410	0/0:27,0:27:68.97:0,69,598	0/0:22,0:22:59.01:0,59,500	0/0:27,1:28:38.85:0,39,554	0/0:23,0:23:59.98:0,60,519	0/0:30,0:30:71.95:0,72,618	0/0:21,0:21:50.97:0,51,442	0/0:13,0:13:29.98:0,30,257	0/0:19,0:19:53.97:0,54,464	0/0:20,0:20:50.99:0,51,442	0/0:16,0:16:44.98:0,45,387	0/0:25,0:25:61.38:0,61,544	0/0:27,0:27:71.98:0,72,624	0/0:25,0:25:65.98:0,66,573	0/0:11,0:11:26.99:0,27,234
chr10	92786616	.	CTTTTCTTTTT	C	1197.63	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=4.478;DP=565;FS=2.405;HRun=0;HaplotypeScore=150.7569;InbreedingCoeff=0.7373;MQ=54.70;MQ0=6;MQRankSum=-3.477;QD=9.66;ReadPosRankSum=0.346;VQSLOD=2.6310;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,99,1404	1/1:1,5:6:2.97:20,3,0	0/1:47,0:10:0.84:1,0,97	0/1:36,0:12:1.99:2,0,236	0/0:13,0:13:29.96:0,30,846	0/0:13,0:13:36.11:0,36,1255	0/0:24,0:24:60:0,60,1351	0/0:33,0:32:66.17:0,66,1191	0/0:19,0:19:36.09:0,36,1358	0/0:32,0:31:83.09:0,83,2513	0/0:7,0:7:16.31:0,16,406	0/0:25,0:25:45.14:0,45,1555	0/0:16,0:16:48.12:0,48,1426	0/0:10,0:10:23.98:0,24,530	1/1:2,7:11:17.80:452,18,0	0/0:19,0:19:45.09:0,45,1324	1/1:15,6:23:53.22:854,53,0	0/0:28,0:27:60.13:0,60,1849	0/0:24,0:24:60.14:0,60,1690	0/0:8,0:8:20.92:0,21,431	0/0:9,0:8:19.91:0,20,287	0/0:7,0:7:20.43:0,20,514	0/0:13,0:13:26.76:0,27,774	0/0:24,0:24:48.13:0,48,1585	0/0:16,0:16:42.99:0,43,1363	0/0:28,0:28:77.85:0,78,1702	0/0:20,0:21:60.13:0,60,1720	0/0:6,0:6:17.99:0,18,448
chr10	92786947	.	TTACTACTACTACTACTACTACTACTAC	T	14961.57	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=7.402;DP=350;FS=21.296;HRun=0;HaplotypeScore=199.3105;InbreedingCoeff=0.1046;MQ=63.58;MQ0=1;MQRankSum=-3.774;QD=47.95;ReadPosRankSum=6.940;VQSLOD=2.0698;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:8:99:239,0,100	0/1:9,0:9:32.91:355,0,33	0/0:13,0:12:23.97:0,24,1354	0/0:17,0:14:27.44:0,27,1611	1/1:16,0:16:18.47:392,18,0	1/1:1,0:13:27.09:1128,27,0	1/1:3,0:3:2.41:47,2,0	1/1:10,25:35:75.21:1835,75,0	1/1:14,0:14:12.04:785,12,0	1/1:9,0:9:9:247,9,0	0/1:9,0:9:12.98:226,0,13	1/1:10,0:10:6.02:402,6,0	1/1:7,0:7:9.03:603,9,0	0/1:13,0:13:9.95:792,0,10	0/1:20,0:20:10.82:2030,0,11	1/1:2,0:9:6.02:237,6,0	0/1:21,0:21:52.90:294,0,53	0/1:15,0:15:32.93:549,0,33	1/1:21,0:20:37.93:1205,38,0	1/1:10,0:10:12.02:628,12,0	1/1:5,0:5:6.48:81,6,0	1/1:5,0:5:3.01:201,3,0	1/1:5,0:5:3.01:182,3,0	0/0:8,0:8:5.96:0,6,45	1/1:19,0:19:6.02:379,6,0	0/1:12,0:12:1.10:1129,0,1	1/1:18,0:18:12.04:797,12,0	1/1:6,0:6:3.01:200,3,0
chr10	92786956	.	CTACTACTACTACTACTACTACTACTAT	C	16398.59	PASS	AB=1.000;AC=47;AF=0.870;AN=54;BaseQRankSum=5.594;DP=323;FS=12.065;HRun=0;HaplotypeScore=169.3912;InbreedingCoeff=0.3012;MQ=55.14;MQ0=2;MQRankSum=-2.058;QD=55.97;ReadPosRankSum=3.488;VQSLOD=3.4587;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:3,0:3:99:201,0,119	0/1:8,0:8:11.98:392,0,12	0/0:10,0:9:21.05:0,21,1165	0/0:14,0:11:28.69:0,29,1393	1/1:0,17:17:21:511,21,0	1/1:12,0:12:27.09:1179,27,0	1/1:2,0:2:6:97,6,0	1/1:25,0:25:66.03:1296,66,0	1/1:0,11:12:12.04:852,12,0	1/1:0,11:11:24:440,24,0	1/1:0,9:9:9.03:291,9,0	1/1:0,8:8:6.02:437,6,0	1/1:0,6:6:9.03:655,9,0	1/1:0,14:14:12.04:873,12,0	1/1:19,0:19:14.16:2254,14,0	1/1:7,0:7:6.02:259,6,0	0/1:23,0:23:27.03:330,0,27	1/1:1,13:14:9.03:620,9,0	1/1:1,20:20:57.05:1616,57,0	1/1:0,9:9:12.04:697,12,0	1/1:4,0:4:11.94:165,12,0	1/1:0,5:5:3.01:219,3,0	1/1:0,5:5:3.01:199,3,0	./.	1/1:0,20:20:6.02:414,6,0	1/1:1,11:12:23.84:1309,24,0	1/1:0,21:21:12.04:874,12,0	1/1:1,5:5:3.01:219,3,0
chr10	92786959	.	CTACTACTACTACTACTACTACTATTAT	C	14401.90	PASS	AB=0.837;AC=47;AF=0.870;AN=54;BaseQRankSum=4.613;DP=316;FS=23.566;HRun=0;HaplotypeScore=172.0408;InbreedingCoeff=0.2683;MQ=49.57;MQ0=2;MQRankSum=-3.352;QD=49.83;ReadPosRankSum=5.008;VQSLOD=2.1518;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:4:99:161,0,207	1/1:1,7:8:6:437,6,0	0/0:8,0:7:18.05:0,18,973	0/0:13,0:10:26.99:0,27,1133	1/1:17,0:17:18.02:389,18,0	1/1:12,0:12:27.09:1009,27,0	1/1:1,0:1:3.01:49,3,0	1/1:25,0:25:48.02:828,48,0	1/1:12,0:12:12.04:796,12,0	1/1:11,0:11:5.99:244,6,0	0/1:9,0:9:7.99:225,0,8	1/1:8,0:8:6.02:400,6,0	1/1:6,0:6:9.03:597,9,0	1/1:14,0:14:12.04:803,12,0	1/1:1,18:19:36.12:2490,36,0	1/1:7,0:7:6.02:221,6,0	0/1:1,20:21:27.90:369,0,28	1/1:13,0:13:9.03:561,9,0	1/1:21,0:20:40.90:1234,41,0	1/1:9,0:9:12.01:621,12,0	1/1:4,0:4:6.01:78,6,0	1/1:5,0:5:3.01:199,3,0	1/1:5,0:5:3.01:181,3,0	./.	1/1:20,0:20:6.02:376,6,0	1/1:11,0:11:20.33:1147,20,0	1/1:21,0:21:12.04:791,12,0	1/1:6,0:5:3.01:198,3,0
chr10	92789579	.	A	AT	17411.06	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-6.253;DP=685;FS=6.557;HRun=6;HaplotypeScore=75.3858;InbreedingCoeff=0.9935;MQ=70.44;MQ0=1;MQRankSum=-5.760;QD=31.37;ReadPosRankSum=0.465;VQSLOD=5.1998;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,126,1284	1/1:2,10:12:30.10:376,30,0	0/0:25,0:23:38.20:0,38,351	0/0:21,0:20:13.50:0,14,331	1/1:2,26:28:72.23:905,72,0	1/1:2,14:16:39.12:491,39,0	1/1:4,29:33:75.24:943,75,0	1/1:1,23:24:69.20:854,69,0	1/1:4,18:22:48.15:604,48,0	1/1:2,18:20:54.17:679,54,0	1/1:2,15:17:39.12:490,39,0	1/1:0,22:22:63.20:793,63,0	1/1:2,18:20:45.14:566,45,0	1/1:2,18:20:54.17:679,54,0	1/1:1,34:35:87.28:1094,87,0	1/1:1,16:17:38.88:490,39,0	0/0:35,0:35:93.21:0,93,949	1/1:1,22:23:63.20:793,63,0	1/1:6,17:23:57.15:688,57,0	1/1:1,23:24:60.19:755,60,0	1/1:2,21:23:54.17:679,54,0	1/1:2,28:30:66.68:831,67,0	1/1:2,21:23:54.17:679,54,0	1/1:5,24:29:69.22:868,69,0	1/1:1,25:26:66.21:830,66,0	1/1:1,23:24:69.20:851,69,0	1/1:2,25:27:69.22:868,69,0	1/1:0,17:17:48.15:604,48,0
chr10	92790618	.	AACG	A	593.63	PASS	AB=0.813;AC=9;AF=0.161;AN=56;BaseQRankSum=8.709;DP=511;FS=28.350;HRun=0;HaplotypeScore=116.1758;InbreedingCoeff=-0.1792;MQ=65.04;MQ0=0;MQRankSum=-5.862;QD=4.60;ReadPosRankSum=0.618;VQSLOD=0.9862;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.14:0,66,1485	0/1:4,1:5:37.18:37,0,272	0/0:31,0:28:21.75:0,22,1128	0/0:25,0:18:27.50:0,27,773	0/0:20,3:23:36.39:0,36,743	0/0:21,1:22:58.61:0,59,1322	0/0:21,1:23:45.89:0,46,1267	0/0:20,0:20:54.18:0,54,1324	0/0:17,0:19:18.03:0,18,1046	0/1:13,5:18:99:223,0,834	0/1:11,4:15:24.73:25,0,548	0/1:12,3:15:4.43:4,0,701	0/0:20,1:21:60.21:0,60,1327	0/0:15,1:16:44.91:0,45,1080	0/0:26,0:28:73.75:0,74,1658	0/1:18,0:19:10.28:10,0,946	0/0:15,1:16:41.49:0,41,1027	0/0:10,0:10:30.10:0,30,681	0/0:13,0:12:36:0,36,771	0/1:15,2:17:7.06:7,0,1019	0/0:12,0:12:33.09:0,33,732	0/0:16,7:23:41.07:0,41,884	0/0:11,0:11:30.03:0,30,546	0/0:21,0:21:45.08:0,45,966	0/0:17,5:22:47.24:0,47,1122	0/1:12,5:17:99:220,0,774	0/1:12,5:20:99:155,0,762	0/1:2,1:3:46.09:46,0,139
chr10	92791642	.	G	GTGTGCA	9667.08	PASS	AB=0.797;AC=40;AF=0.714;AN=56;BaseQRankSum=-8.225;DP=454;FS=79.234;HRun=0;HaplotypeScore=136.7818;InbreedingCoeff=0.7240;MQ=60.24;MQ0=0;MQRankSum=-11.992;QD=31.18;ReadPosRankSum=3.045;VQSLOD=1.6213;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:81.28:0,81,1745	0/0:10,0:10:30.10:0,30,646	0/0:23,0:24:56.90:0,57,1041	0/0:24,0:23:44.27:0,44,790	0/0:2,8:10:0:0,0,0	1/1:8,7:15:21.07:702,21,0	1/1:12,15:28:21.07:702,21,0	0/0:31,0:31:60.21:0,60,1260	1/1:4,8:12:18.06:602,18,0	1/1:6,14:23:54.14:1578,54,0	1/1:4,9:13:17.77:601,18,0	1/1:6,4:10:9.03:301,9,0	1/1:5,3:9:9.03:254,9,0	1/1:6,1:8:3.01:100,3,0	0/0:13,0:13:33.11:0,33,710	1/1:4,8:12:12.04:401,12,0	0/1:31,1:32:16.07:16,0,1564	1/1:3,2:6:9.03:300,9,0	1/1:13,2:15:18.03:440,18,0	1/1:4,6:11:6.02:201,6,0	1/1:6,8:15:6.02:200,6,0	1/1:1,17:18:15.05:501,15,0	1/1:5,4:9:11.40:309,11,0	0/1:6,5:15:0.16:0,0,0	1/1:9,7:17:12.04:401,12,0	1/1:11,12:24:42.14:1292,42,0	1/1:5,6:11:18.06:600,18,0	1/1:4,1:6:6.02:164,6,0
chr10	92791791	.	A	AAAAAAC	4029.94	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-0.454;DP=544;FS=100.191;HRun=0;HaplotypeScore=117.4331;InbreedingCoeff=0.9581;MQ=69.27;MQ0=0;MQRankSum=-8.303;QD=30.53;ReadPosRankSum=-3.470;VQSLOD=-0.5962;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:54.10:0,54,1058	0/0:10,0:10:11.88:0,12,157	0/0:18,0:16:11.95:0,12,104	0/0:27,0:24:24.85:0,25,612	0/0:24,0:24:48.07:0,48,869	0/0:16,0:16:45.12:0,45,868	0/0:29,0:29:48.26:0,48,952	0/0:34,0:34:51.09:0,51,708	0/0:17,0:17:39.06:0,39,718	0/0:29,0:29:60.17:0,60,1084	0/0:16,0:16:41.98:0,42,690	1/1:12,7:20:12.04:362,12,0	1/1:7,11:20:20.94:604,21,0	1/1:3,6:12:12.04:388,12,0	0/0:16,0:16:30.10:0,30,613	0/0:15,0:15:27.02:0,27,468	0/0:35,0:35:34.29:0,34,1069	1/1:5,9:14:9.03:291,9,0	0/0:13,0:13:21.03:0,21,354	0/0:24,0:24:60.14:0,60,1103	0/0:13,0:13:24.07:0,24,430	1/1:7,7:14:30.06:862,30,0	1/1:7,7:16:12.04:314,12,0	1/1:11,8:23:18.06:549,18,0	1/1:5,7:13:21.07:660,21,0	0/0:26,0:26:57.06:0,57,945	0/0:15,0:15:30.10:0,30,576	0/0:8,0:8:18.06:0,18,368
chr10	92793795	.	A	AGCTCCCTGT	1897.75	PASS	AB=1.000;AC=3;AF=0.056;AN=54;BaseQRankSum=0.277;DP=605;FS=2.035;HRun=0;HaplotypeScore=184.2400;InbreedingCoeff=0.5973;MQ=74.26;MQ0=0;MQRankSum=-5.935;QD=32.17;ReadPosRankSum=-2.434;VQSLOD=2.7191;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,13:42:48.16:1972,48,0	0/0:6,0:6:6.02:0,6,166	0/1:17,0:17:30.93:31,0,318	0/0:21,0:21:24.06:0,24,475	0/0:15,0:15:33.11:0,33,916	0/0:24,0:24:51.14:0,51,1320	0/0:29,0:29:60.15:0,60,1498	0/0:29,0:29:21.06:0,21,471	0/0:16,0:16:39.13:0,39,1041	0/0:18,0:18:33.11:0,33,861	0/0:15,0:15:27.06:0,27,644	0/0:19,0:19:48.15:0,48,1273	0/0:16,0:16:39.10:0,39,926	0/0:27,0:27:63.19:0,63,1612	0/0:32,0:32:75.26:0,75,2081	0/0:23,0:23:51.08:0,51,1190	0/0:26,0:26:51.18:0,51,1382	0/0:16,0:16:27.09:0,27,709	0/0:25,0:25:30.09:0,30,720	0/0:15,0:15:33.07:0,33,852	0/0:34,0:34:54.19:0,54,1447	0/0:21,0:21:36.11:0,36,909	0/0:15,0:15:30.09:0,30,766	0/0:43,0:43:78.25:0,78,2091	0/0:19,0:19:45.14:0,45,1159	0/0:23,0:23:54.19:0,54,1471	0/0:17,0:17:42.14:0,42,1098	./.
chr10	92794055	.	AGAAAAGAGAGCAGAGTC	A	3536.49	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.239;DP=712;FS=6.589;HRun=0;HaplotypeScore=362.9858;InbreedingCoeff=0.9832;MQ=81.91;MQ0=0;MQRankSum=-8.283;QD=98.24;ReadPosRankSum=2.775;VQSLOD=2.6184;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:67,0:67:99:0,202,14918	1/1:1,10:11:24.08:1141,24,0	0/0:21,0:21:60.18:0,60,2628	0/0:21,0:21:51.12:0,51,2499	0/0:21,0:21:60.19:0,60,3770	0/0:18,0:18:54.19:0,54,3960	0/0:31,0:31:90.23:0,90,5592	0/0:43,0:43:99:0,129,7029	0/0:28,0:28:81.25:0,81,5301	0/0:21,0:21:63.22:0,63,4115	0/0:16,0:16:42.62:0,43,2758	0/0:27,0:27:81.28:0,81,5112	0/0:26,0:26:75.24:0,75,4978	0/0:16,0:16:48.16:0,48,3386	1/1:5,20:25:51.18:2395,51,0	0/0:25,0:25:75.26:0,75,5016	0/0:30,0:30:90.28:0,90,6531	0/0:23,0:23:69.24:0,69,4042	0/0:17,0:17:51.18:0,51,2628	0/0:17,0:17:48.03:0,48,3118	0/0:60,0:60:99:0,177,11812	0/0:17,0:17:42.14:0,42,2890	0/0:14,0:14:36.11:0,36,2484	0/0:42,0:42:99:0,124,7818	0/0:22,0:22:66.23:0,66,4378	0/0:22,0:22:66.22:0,66,4279	0/0:25,0:24:72.19:0,72,4415	0/0:5,0:5:12.04:0,12,908
chr10	92794508	.	CT	C	849.33	PASS	AB=0.846;AC=14;AF=0.250;AN=56;BaseQRankSum=5.839;DP=664;FS=7.919;HRun=15;HaplotypeScore=79.4720;InbreedingCoeff=0.3788;MQ=71.11;MQ0=2;MQRankSum=-0.268;QD=3.79;ReadPosRankSum=5.398;VQSLOD=0.5208;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:26,4:31:13.47:13,0,340	0/1:2,10:13:6.74:82,0,7	0/1:22,2:17:22.75:23,0,114	0/0:13,1:12:11.23:0,11,91	0/0:33,0:32:57.88:0,58,494	1/1:4,16:24:49.50:293,49,0	1/1:11,17:31:3.58:253,4,0	0/0:19,0:33:46.29:0,46,254	0/1:23,1:24:1.01:1,0,205	0/0:20,1:24:22.32:0,22,280	0/0:22,1:23:18.23:0,18,259	0/0:18,0:17:32.94:0,33,273	0/0:25,0:27:38.80:0,39,355	0/0:28,3:34:13.40:0,13,364	1/1:9,17:29:33.43:204,33,0	1/1:7,12:19:2.29:129,2,0	0/0:18,3:21:28.61:0,29,346	0/0:19,1:21:14.18:0,14,205	0/1:17,3:21:2.59:3,0,207	0/0:28,0:29:58.49:0,58,483	0/0:10,1:11:2.95:0,3,136	0/0:13,1:15:6.73:0,7,195	0/0:23,1:26:32.92:0,33,368	0/0:26,3:30:2.37:0,2,276	0/0:16,1:19:20.44:0,20,281	0/0:24,1:25:53.84:0,54,444	0/0:34,3:37:55.42:0,55,546	0/1:4,1:8:1.43:1,0,102
chr10	92795188	.	AT	A	1344.43	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.532;DP=705;FS=0.491;HRun=10;HaplotypeScore=115.0892;InbreedingCoeff=0.9637;MQ=73.83;MQ0=1;MQRankSum=-0.246;QD=17.24;ReadPosRankSum=1.139;VQSLOD=3.1767;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:27:60.09:0,60,333	0/0:16,1:17:19.07:0,19,439	0/0:15,0:15:26.89:0,27,284	0/0:8,0:9:9.02:0,9,99	0/0:3,0:36:95.73:0,96,518	1/1:3,23:26:56.99:495,57,0	1/1:6,21:27:39.45:497,39,0	0/0:37,0:38:93.24:0,93,1015	0/0:1,0:19:43.04:0,43,227	0/0:3,0:26:61.73:0,62,361	0/0:7,0:30:52.33:0,52,274	0/0:3,0:17:25.74:0,26,129	0/0:4,0:18:25.77:0,26,130	0/0:2,0:34:77.16:0,77,427	0/0:27,4:31:26.09:0,26,736	1/1:4,21:25:56.97:495,57,0	0/0:23,0:23:57.09:0,57,614	0/0:4,0:28:52.15:0,52,257	0/0:6,0:26:57.91:0,58,303	0/0:2,0:30:65.27:0,65,335	0/0:8,0:25:49.01:0,49,266	0/0:3,0:22:40.08:0,40,218	0/0:7,0:34:55.34:0,55,277	0/0:3,0:33:54.56:0,55,275	0/0:3,0:27:46.23:0,46,232	0/0:3,0:29:74.88:0,75,399	0/0:3,0:26:55.73:0,56,278	0/0:0,0:5:11.47:0,11,58
chr10	92795701	.	GA	G	1598.57	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.304;DP=718;FS=6.438;HRun=1;HaplotypeScore=78.1865;InbreedingCoeff=0.9936;MQ=78.84;MQ0=0;MQRankSum=0.034;QD=31.97;ReadPosRankSum=1.420;VQSLOD=3.0610;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,2142	1/1:0,12:12:36.11:447,36,0	0/0:24,0:24:55.22:0,55,1032	0/0:10,0:10:17.97:0,18,238	0/0:31,0:31:90.31:0,90,1430	0/0:22,0:21:66.19:0,66,1007	0/0:16,0:16:48.16:0,48,765	0/0:28,0:28:81.24:0,81,1248	0/0:33,0:33:99:0,99,1580	0/0:30,0:30:90.29:0,90,1398	0/0:19,0:19:57.17:0,57,865	0/0:24,0:24:72.25:0,72,1142	0/0:24,0:24:72.23:0,72,1124	0/0:20,0:20:60.19:0,60,932	1/1:1,37:38:99:1273,102,0	0/0:38,0:38:99:0,114,1726	0/0:43,0:43:99:0,129,2034	0/0:24,0:24:69.20:0,69,1076	0/0:18,0:18:51.16:0,51,777	0/0:27,0:27:81.28:0,81,1292	0/0:33,0:33:92.96:0,93,1402	0/0:32,0:32:93.30:0,93,1462	0/0:13,0:13:39.12:0,39,600	0/0:34,0:34:99:0,102,1604	0/0:19,0:19:57.18:0,57,889	0/0:29,0:29:87.30:0,87,1389	0/0:24,0:24:71.95:0,72,1068	0/0:7,0:7:21.07:0,21,336
chr10	92797694	.	ATCTCTCTCTCTCTC	A	2688.86	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=4.592;DP=580;FS=5.198;HRun=0;HaplotypeScore=222.3316;InbreedingCoeff=0.7428;MQ=70.84;MQ0=10;MQRankSum=-4.917;QD=21.68;ReadPosRankSum=1.823;VQSLOD=1.7381;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:25:27.09:0,27,629	0/0:15,0:15:18.53:0,19,791	0/0:41,0:24:0:0,0,0	0/0:32,0:21:3.90:0,4,39	1/1:7,4:11:9.03:277,9,0	0/0:27,0:26:5.98:0,6,158	0/0:21,0:26:27.02:0,27,908	0/0:37,0:37:41.14:0,41,959	1/1:16,6:22:20.94:720,21,0	1/1:14,6:20:13.62:427,14,0	1/1:3,1:5:6.02:215,6,0	0/0:19,0:19:15.05:0,15,775	0/0:25,0:24:15.99:0,16,506	0/0:22,0:21:21.07:0,21,683	0/0:19,0:19:22.09:0,22,858	0/0:31,0:31:30.57:0,31,1468	0/0:28,0:28:37.01:0,37,1948	0/0:20,0:19:30.10:0,30,1643	1/1:15,3:18:9.01:239,9,0	1/1:7,3:9:4.83:123,5,0	0/0:24,0:22:3.01:0,3,38	0/0:13,0:13:3.01:0,3,199	0/0:11,0:11:9.03:0,9,363	0/0:26,0:25:15.05:0,15,687	0/0:14,0:14:3.48:0,3,95	1/1:10,3:13:9.03:284,9,0	1/1:8,5:13:12.04:470,12,0	1/1:8,3:10:3.01:118,3,0
chr10	92798385	.	A	AT	1241.91	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=1.724;DP=282;FS=1.254;HRun=1;HaplotypeScore=41.8154;InbreedingCoeff=0.8324;MQ=33.87;MQ0=16;MQRankSum=0.410;QD=11.19;ReadPosRankSum=1.235;VQSLOD=1.8114;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:28.05:0,28,156	1/1:8,0:8:2.06:10,2,0	0/0:3,0:3:8.85:0,9,78	0/0:5,0:1:3:0,3,25	0/0:13,0:12:29.26:0,29,170	1/1:0,9:9:5.99:65,6,0	1/1:9,0:8:17.86:133,18,0	0/0:25,0:25:71.16:0,71,511	0/0:7,0:5:13:0,13,73	0/0:10,0:8:22.67:0,23,136	0/0:8,0:8:17.42:0,17,99	1/1:9,0:8:21.29:133,21,0	1/1:8,0:8:22.90:141,23,0	1/1:6,1:7:20.08:145,20,0	1/1:11,0:11:4.75:23,5,0	1/1:10,0:9:26.59:175,27,0	0/0:22,0:20:44.51:0,45,372	1/1:11,3:12:30.85:258,31,0	0/0:5,0:5:14.51:0,15,89	0/0:18,0:17:44.14:0,44,270	0/0:7,0:3:2.92:0,3,17	1/1:3,0:2:3.44:21,3,0	1/1:6,0:6:17.33:109,17,0	1/1:6,0:2:5.45:28,5,0	1/1:10,1:11:31.23:211,31,0	0/0:14,0:13:34.73:0,35,206	0/0:15,0:15:32.32:0,32,195	0/0:5,0:5:14.59:0,15,86
chr10	92798401	.	AAG	A	908.24	PASS	AB=1.000;AC=28;AF=0.519;AN=54;BaseQRankSum=0.457;DP=329;FS=22.725;HRun=0;HaplotypeScore=52.1039;InbreedingCoeff=0.7085;MQ=50.19;MQ0=9;MQRankSum=1.595;QD=5.07;ReadPosRankSum=-3.438;VQSLOD=0.1256;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:3.01:0,3,36	1/1:7,1:8:14.88:114,15,0	0/0:15,0:11:29.94:0,30,313	0/0:11,0:6:1.61:0,2,74	1/1:21,0:20:20.61:182,21,0	0/1:2,0:2:0:0,0,0	1/1:10,0:9:8.95:67,9,0	1/1:18,4:22:20.97:188,21,0	1/1:8,0:8:6:52,6,0	0/1:11,0:11:1.44:71,0,1	1/1:9,0:9:3:27,3,0	0/0:9,0:9:12.02:0,12,142	0/0:8,0:8:12.02:0,12,141	0/0:8,0:8:15.02:0,15,170	1/1:11,0:11:5.97:46,6,0	1/1:10,0:9:3.50:50,3,0	0/0:22,0:21:35.75:0,36,365	0/0:23,0:22:43.04:0,43,453	1/1:7,0:7:8.97:70,9,0	1/1:21,0:20:11.97:98,12,0	1/1:9,0:6:6:52,6,0	0/0:7,0:7:15:0,15,143	0/0:11,0:11:17.92:0,18,155	0/0:7,0:5:14.88:0,15,125	0/0:12,0:12:20.99:0,21,254	1/1:14,0:13:2.98:21,3,0	1/1:16,0:16:8.76:59,9,0	./.
chr10	92798820	.	TA	T	3554.60	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=5.753;DP=393;FS=0.458;HRun=9;HaplotypeScore=53.3993;InbreedingCoeff=0.9632;MQ=72.37;MQ0=1;MQRankSum=-2.228;QD=22.64;ReadPosRankSum=0.864;VQSLOD=4.3443;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:66.20:0,66,761	1/1:1,3:4:9:82,9,0	0/0:20,0:19:39.06:0,39,412	0/0:7,0:7:5.15:0,5,34	0/0:19,0:19:45.09:0,45,504	1/1:1,7:8:21.01:192,21,0	1/1:2,11:13:32.94:291,33,0	1/1:2,16:18:48.01:435,48,0	0/0:22,0:22:51.12:0,51,567	0/0:25,0:25:66.15:0,66,739	0/0:10,0:10:21.03:0,21,228	1/1:1,12:13:35.94:319,36,0	1/1:2,6:8:18.01:164,18,0	1/1:0,10:10:27.01:247,27,0	1/1:5,16:21:45:405,45,0	1/1:1,11:12:33.02:302,33,0	0/0:17,0:17:42.10:0,42,471	1/1:0,5:5:9:82,9,0	0/0:16,0:16:42.10:0,42,466	0/0:25,0:25:54.16:0,54,623	0/0:15,0:15:36.11:0,36,415	1/1:1,9:10:23.68:194,24,0	1/1:0,12:12:33.02:302,33,0	1/1:0,10:10:20.91:182,21,0	1/1:0,13:13:39.02:357,39,0	0/0:12,0:12:33.10:0,33,381	0/0:11,0:10:21.04:0,21,242	0/0:10,0:10:30.06:0,30,333
chr10	92799239	.	A	AC	1042.96	PASS	AB=0.665;AC=22;AF=0.440;AN=50;BaseQRankSum=-2.202;DP=178;FS=0.000;HRun=1;HaplotypeScore=59.6225;InbreedingCoeff=0.3960;MQ=76.45;MQ0=1;MQRankSum=-1.668;QD=12.42;ReadPosRankSum=3.415;VQSLOD=2.2346;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,3:5:2.60:10,3,0	./.	0/0:13,0:9:20.92:0,21,199	0/1:11,0:10:29.68:30,0,69	0/0:0,8:8:8.63:0,9,31	0/0:1,6:7:1.72:0,2,4	0/1:2,3:5:0.13:0,0,0	1/1:1,3:4:9.03:138,9,0	0/0:1,1:2:0:0,0,0	1/1:0,7:7:21.07:324,21,0	0/0:2,9:11:5.73:0,6,16	1/1:1,2:4:0.24:0,0,0	0/1:0,6:4:0:0,0,0	0/0:0,3:3:0:0,0,0	0/0:2,7:9:0.42:0,0,1	0/1:4,7:10:11.99:20,0,12	1/1:1,6:7:3.47:29,3,0	1/1:0,2:2:3.01:47,3,0	1/1:0,5:5:12.04:184,12,0	0/0:0,9:9:3.07:0,3,11	./.	0/0:1,6:7:5.50:0,5,19	0/0:0,6:7:3.41:0,3,15	0/0:0,5:5:3.73:0,4,16	0/0:2,4:6:1.08:0,1,3	1/1:0,8:8:24.08:360,24,0	1/1:1,7:8:3.41:35,3,0	./.
chr10	92799248	.	AC	A	1288.22	PASS	AC=48;AF=0.923;AN=52;BaseQRankSum=-3.766;DP=206;FS=19.293;HRun=2;HaplotypeScore=58.2973;InbreedingCoeff=0.3753;MQ=86.35;MQ0=1;MQRankSum=-4.697;QD=7.76;ReadPosRankSum=1.138;VQSLOD=-0.5131;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,1:7:2.99:23,3,0	1/1:4,0:4:3.11:8,3,0	0/0:19,1:15:5.42:0,5,308	0/0:16,0:15:6.17:0,6,106	1/1:8,0:8:9.92:43,10,0	1/1:7,2:9:6.13:18,6,0	1/1:3,2:5:7.27:80,7,0	1/1:3,3:6:15.02:159,15,0	1/1:2,0:2:1.25:3,1,0	1/1:7,1:8:24.03:237,24,0	1/1:9,3:12:9.20:32,9,0	1/1:3,1:4:4.26:41,4,0	1/1:6,0:4:1.25:3,1,0	1/1:3,0:3:2.13:5,2,0	1/1:9,0:9:4.72:11,5,0	1/1:9,2:10:16.05:120,16,0	1/1:10,0:10:5.75:50,6,0	1/1:2,0:2:3:27,3,0	1/1:5,2:7:15.02:146,15,0	1/1:9,0:9:11.68:37,12,0	./.	1/1:7,0:7:3.27:15,3,0	1/1:7,1:8:3.98:17,4,0	1/1:5,0:5:5.72:20,6,0	1/1:5,2:7:2.76:10,3,0	1/1:7,1:9:20.12:224,20,0	1/1:7,1:8:7.25:67,7,0	./.
chr10	92799249	.	C	CA	1517.37	PASS	AB=0.536;AC=22;AF=0.440;AN=50;BaseQRankSum=-4.283;DP=218;FS=5.776;HRun=1;HaplotypeScore=62.1070;InbreedingCoeff=0.4921;MQ=84.54;MQ0=1;MQRankSum=-1.556;QD=17.24;ReadPosRankSum=2.760;VQSLOD=3.9808;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,6:7:3.01:48,3,0	./.	0/0:20,0:15:5.46:0,5,297	0/0:20,0:17:13.19:0,13,133	0/0:0,8:8:8.63:0,9,31	0/0:2,7:9:1.72:0,2,4	1/1:2,3:5:5.89:77,6,0	1/1:5,3:8:18.06:251,18,0	0/0:1,2:3:0:0,0,0	1/1:2,7:9:27.06:383,27,0	0/0:3,8:12:5.73:0,6,16	1/1:1,3:4:2.92:38,3,0	0/1:0,6:4:0:0,0,0	0/0:0,3:3:0:0,0,0	0/0:0,8:8:0.42:0,0,1	0/1:3,9:11:9.75:64,0,10	1/1:0,10:10:6.02:86,6,0	1/1:0,2:2:3.01:47,3,0	1/1:2,5:7:15.05:223,15,0	0/0:1,9:10:3.07:0,3,11	./.	0/0:1,7:8:5.08:0,5,18	0/0:1,7:8:3.32:0,3,15	0/0:0,5:5:3.73:0,4,16	0/0:2,5:7:1.08:0,1,3	1/1:2,7:9:26.12:368,26,0	1/1:2,7:9:5.95:76,6,0	./.
chr10	92799256	.	C	CTTT	3572.43	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-2.995;DP=268;FS=20.902;HRun=10;HaplotypeScore=82.6441;InbreedingCoeff=0.6875;MQ=82.99;MQ0=1;MQRankSum=-5.847;QD=19.85;ReadPosRankSum=-1.616;VQSLOD=0.1039;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:5.92:0,6,56	1/1:2,0:4:6.57:31,7,0	0/0:31,0:21:11.18:0,11,372	0/0:26,0:22:23.93:0,24,267	1/1:6,3:9:13.29:124,13,0	1/1:5,4:9:18.98:234,19,0	1/1:4,1:5:4.57:62,5,0	0/0:10,0:10:27.07:0,27,328	1/1:1,2:4:7.58:117,8,0	1/1:5,4:10:18.06:295,18,0	1/1:9,5:14:27.13:306,27,0	1/1:4,1:5:6.12:66,6,0	1/1:6,0:4:3.59:10,4,0	1/1:3,0:4:7.53:76,8,0	1/1:8,0:11:0.36:22,0,0	1/1:5,7:11:25.73:356,26,0	0/0:10,0:11:17.93:0,18,170	1/1:2,2:5:3.01:58,3,0	1/1:3,3:8:13.27:199,13,0	1/1:3,6:11:23.21:317,23,0	1/1:3,2:4:7.50:45,7,0	1/1:6,0:8:14.23:123,14,0	1/1:7,0:9:17.76:224,18,0	1/1:4,0:5:8.25:67,8,0	1/1:11,1:12:22.11:314,22,0	1/1:7,3:11:15.03:247,15,0	1/1:7,4:11:15.61:168,16,0	1/1:1,1:2:6.02:113,6,0
chr10	92800118	.	C	CA	1088.63	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.402;DP=724;FS=0.000;HRun=7;HaplotypeScore=118.1668;InbreedingCoeff=0.9953;MQ=70.61;MQ0=0;MQRankSum=-0.777;QD=31.10;ReadPosRankSum=-3.699;VQSLOD=0.9531;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,1246	0/0:9,0:9:21.03:0,21,203	0/0:17,0:16:33:0,33,306	0/0:18,0:19:41.65:0,42,385	0/0:28,0:28:68.95:0,69,645	0/0:21,0:21:51.06:0,51,487	0/0:24,0:24:60.04:0,60,565	1/1:2,33:35:99:1184,99,0	0/0:21,0:21:51.06:0,51,486	0/0:30,0:30:84.06:0,84,787	0/0:17,0:17:45.07:0,45,435	0/0:22,0:22:48.07:0,48,463	0/0:27,0:27:72.11:0,72,695	0/0:23,0:23:57.06:0,57,543	0/0:33,0:33:90.10:0,90,856	0/0:25,0:25:63.09:0,63,604	0/0:27,0:26:72.11:0,72,695	0/0:27,0:27:69.09:0,69,659	0/0:25,0:25:60.05:0,60,565	0/0:23,0:23:63.10:0,63,607	0/0:52,0:51:99:0,132,1246	0/0:25,0:25:72.11:0,72,691	0/0:31,0:31:75.11:0,75,723	0/0:30,0:30:86.95:0,87,790	0/0:32,0:32:69.10:0,69,666	0/0:28,0:28:72.11:0,72,695	0/0:16,0:16:42.07:0,42,405	0/0:11,0:11:33.05:0,33,318
chr10	92800194	.	CT	C	19177.68	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=4.332;DP=649;FS=1.833;HRun=2;HaplotypeScore=100.3074;InbreedingCoeff=0.9910;MQ=88.75;MQ0=0;MQRankSum=-6.040;QD=35.32;ReadPosRankSum=3.259;VQSLOD=5.0918;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1567	1/1:0,4:4:12.04:156,12,0	0/0:24,0:24:64.01:0,64,890	0/0:23,0:23:63.18:0,63,873	1/1:1,16:17:39.13:506,39,0	1/1:1,22:23:63.20:816,63,0	1/1:0,26:26:69.22:896,69,0	1/1:0,32:32:96.30:1229,96,0	1/1:1,25:26:75.24:973,75,0	1/1:1,24:25:69.20:867,69,0	1/1:0,12:12:27.09:350,27,0	1/1:1,27:28:72.23:933,72,0	1/1:1,18:19:51.15:647,51,0	1/1:0,28:28:72.23:934,72,0	1/1:1,27:28:75.24:974,75,0	1/1:0,19:19:48.16:623,48,0	0/0:21,0:21:63.20:0,63,921	1/1:0,24:24:69.18:877,69,0	1/1:0,18:17:51.17:661,51,0	1/1:0,20:20:57.19:740,57,0	1/1:0,43:43:99:1558,120,0	1/1:0,23:23:63.20:817,63,0	1/1:2,16:18:48.16:623,48,0	1/1:0,29:29:78.25:1013,78,0	1/1:0,22:22:57.19:739,57,0	1/1:0,23:23:69.21:882,69,0	1/1:1,25:26:75.24:973,75,0	1/1:0,10:10:30.10:389,30,0
chr10	92800270	.	GCC	G	5648.96	PASS	AB=0.717;AC=33;AF=0.589;AN=56;BaseQRankSum=-3.402;DP=443;FS=0.441;HRun=11;HaplotypeScore=83.3405;InbreedingCoeff=0.6249;MQ=74.70;MQ0=1;MQRankSum=-0.399;QD=16.37;ReadPosRankSum=7.783;VQSLOD=3.1046;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:29:52.13:227,52,0	0/1:5,0:10:15.25:32,0,15	0/0:14,0:12:9.40:0,9,99	0/0:12,0:11:19.95:0,20,170	0/0:4,0:6:7.83:0,8,42	1/1:3,16:19:48.11:511,48,0	1/1:3,17:20:39.08:415,39,0	1/1:7,5:12:11.99:128,12,0	0/1:7,2:16:34.80:35,0,79	0/0:12,0:13:24.18:0,24,168	0/0:8,0:10:13.45:0,13,61	1/1:2,14:16:42.10:447,42,0	1/1:3,10:13:33.05:343,33,0	1/1:3,17:20:57.11:595,57,0	1/1:6,0:30:74.03:322,74,0	1/1:5,11:16:10.23:325,10,0	0/1:15,2:18:15.80:16,0,465	1/1:3,16:22:23.94:490,24,0	0/1:9,1:16:1.36:1,0,120	0/0:0,0:1:2.50:0,2,9	0/0:18,0:26:26.33:0,26,112	1/1:3,10:13:30.06:312,30,0	1/1:2,2:4:9.02:95,9,0	1/1:10,24:34:81.80:814,82,0	1/1:8,14:22:50.96:541,51,0	0/1:8,1:15:0.28:0,0,100	0/0:9,0:11:19.86:0,20,145	0/0:0,0:3:7.49:0,7,26
chr10	92802039	.	TTGTAAGTCTTACAGGTC	T	14504.19	PASS	AB=0.846;AC=41;AF=0.820;AN=50;BaseQRankSum=10.661;DP=490;FS=110.993;HRun=0;HaplotypeScore=219.1319;InbreedingCoeff=0.7259;MQ=56.90;MQ0=0;MQRankSum=-9.357;QD=45.61;ReadPosRankSum=2.889;VQSLOD=1.1523;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,122,9001	1/1:6,0:6:3.01:111,3,0	0/0:16,0:16:5.75:0,6,184	./.	0/1:9,2:11:0:0,0,0	1/1:8,3:11:9.03:421,9,0	1/1:6,8:14:12.04:553,12,0	0/0:29,0:29:45.15:0,45,2693	1/1:9,11:20:24.08:1121,24,0	1/1:13,8:21:27.08:992,27,0	1/1:2,5:7:6.02:280,6,0	1/1:9,10:18:24.08:1121,24,0	1/1:12,9:21:21.07:981,21,0	1/1:6,13:19:36.12:1637,36,0	1/1:5,12:17:27.09:1262,27,0	1/1:4,7:11:18.06:841,18,0	0/0:26,0:26:51.17:0,51,3497	1/1:7,8:15:12.04:561,12,0	1/1:8,10:18:30.08:751,30,0	1/1:8,8:16:9.03:315,9,0	./.	1/1:7,8:15:6.02:278,6,0	1/1:6,6:12:8.90:316,9,0	1/1:13,5:18:0.35:187,0,0	1/1:6,8:14:18.06:841,18,0	1/1:8,7:15:21.07:816,21,0	1/1:6,12:18:24.08:1121,24,0	./.
chr10	92803180	.	TACAC	T	455.58	PASS	AB=0.883;AC=19;AF=0.475;AN=40;BaseQRankSum=3.213;DP=411;FS=3.043;HRun=0;HaplotypeScore=80.9003;InbreedingCoeff=0.2865;MQ=71.53;MQ0=14;MQRankSum=0.518;QD=3.70;ReadPosRankSum=-0.801;VQSLOD=1.7089;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:5,0:5:2.98:0,3,22	./.	./.	0/1:15,1:15:2.81:47,0,3	1/1:16,0:16:6.01:55,6,0	1/1:13,0:13:2.79:19,3,0	./.	1/1:8,0:7:3:28,3,0	0/0:19,0:19:3.25:0,3,29	./.	1/1:11,0:12:6.42:56,6,0	0/0:10,0:10:3.45:0,3,36	0/1:7,0:8:19.22:19,0,22	0/0:11,0:11:0.47:0,0,1	./.	0/0:24,0:24:9.51:0,10,386	0/0:18,0:18:5.91:0,6,38	./.	1/1:13,1:15:6:71,6,0	0/0:18,0:17:8.46:0,8,53	./.	1/1:8,0:10:5.96:47,6,0	0/0:23,0:23:2.74:0,3,12	0/0:8,0:8:2.03:0,2,6	1/1:12,0:12:1.29:77,1,0	0/1:7,2:8:8.92:150,0,9	1/1:3,0:3:2.74:12,3,0
chr10	92803230	.	CACAA	C	544.36	PASS	AB=0.965;AC=7;AF=0.125;AN=56;BaseQRankSum=5.809;DP=513;FS=19.963;HRun=0;HaplotypeScore=96.7019;InbreedingCoeff=0.1705;MQ=58.39;MQ0=20;MQRankSum=0.274;QD=4.39;ReadPosRankSum=1.857;VQSLOD=0.6498;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:25:59.84:487,60,0	0/0:6,0:6:14.08:0,14,102	0/0:19,0:14:35.22:0,35,393	0/0:22,0:17:37.10:0,37,416	0/0:16,0:15:0.92:0,1,152	0/1:20,0:19:20.25:20,0,206	0/0:24,0:23:49.15:0,49,403	0/0:28,0:26:67.42:0,67,588	0/1:12,0:10:19.75:20,0,166	0/0:16,0:16:34.25:0,34,338	0/0:9,0:8:12.01:0,12,109	0/0:18,0:18:20.82:0,21,250	0/0:19,0:19:29.63:0,30,341	0/0:13,0:13:13.32:0,13,252	0/0:15,0:14:32.70:0,33,268	0/0:16,0:15:38.84:0,39,350	0/0:26,0:26:19.08:0,19,699	0/0:22,0:22:43.34:0,43,397	0/0:14,0:14:39.62:0,40,307	0/1:16,1:16:0.68:1,0,303	0/0:28,0:27:48.29:0,48,425	0/0:16,0:15:21.99:0,22,268	0/0:18,0:18:21.66:0,22,224	0/0:22,0:20:24.38:0,24,248	0/0:16,0:14:26.36:0,26,212	0/1:19,3:21:45.63:46,0,360	0/1:24,0:23:99:100,0,311	0/0:6,0:5:11.84:0,12,103
chr10	92805958	.	GGTGTGTGT	G	621.48	PASS	AB=1.000;AC=25;AF=0.833;AN=30;BaseQRankSum=2.540;DP=533;FS=1.971;HRun=0;HaplotypeScore=119.4751;InbreedingCoeff=0.2152;MQ=70.48;MQ0=27;MQRankSum=-0.889;QD=2.60;ReadPosRankSum=0.191;VQSLOD=2.1288;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	1/1:15,0:14:2.97:34,3,0	1/1:25,6:30:6.02:80,6,0	./.	0/1:10,0:10:28.71:49,0,29	./.	./.	1/1:17,1:18:2.22:7,2,0	1/1:9,1:10:2.33:73,2,0	1/1:19,3:22:3:32,3,0	1/1:16,2:19:9.03:204,9,0	1/1:20,0:22:6.02:112,6,0	0/0:17,0:18:15.51:0,16,406	1/1:15,0:14:3.01:74,3,0	./.	./.	./.	./.	1/1:11,0:10:1.24:3,1,0	1/1:28,5:32:2.73:41,3,0	1/1:16,0:15:2.03:6,2,0	0/0:21,0:19:0:0,0,0	1/1:15,0:15:1.55:4,2,0	./.
chr10	92806197	.	A	AT	712.77	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.614;DP=598;FS=9.827;HRun=7;HaplotypeScore=58.1753;InbreedingCoeff=0.9591;MQ=72.23;MQ0=0;MQRankSum=2.223;QD=28.51;ReadPosRankSum=-4.510;VQSLOD=1.9259;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.92:0,88,822	0/0:9,0:9:27.02:0,27,250	0/0:23,0:18:34.25:0,34,285	0/0:22,0:20:10.81:0,11,239	0/0:26,0:26:63.03:0,63,590	0/0:17,0:17:45.04:0,45,422	0/0:32,0:32:84.09:0,84,795	1/1:2,23:25:69.18:808,69,0	0/0:15,0:15:45.07:0,45,434	0/0:19,0:19:54.08:0,54,515	0/0:19,0:19:51.08:0,51,492	0/0:22,0:22:57.09:0,57,550	0/0:10,0:10:27.02:0,27,253	0/0:18,0:18:48.08:0,48,463	0/0:23,0:23:60.07:0,60,573	0/0:21,0:21:57.06:0,57,542	0/0:34,0:34:96.15:0,96,927	0/0:22,0:22:48.06:0,48,464	0/0:18,0:18:42.06:0,42,405	0/0:29,0:29:78.12:0,78,753	0/0:11,0:11:33.04:0,33,313	0/0:12,0:12:36.06:0,36,346	0/0:21,0:21:60.08:0,60,573	0/0:26,0:26:72.09:0,72,685	0/0:16,0:16:45.07:0,45,434	0/0:30,0:30:81.11:0,81,776	0/0:24,0:24:66.09:0,66,630	0/0:22,0:22:51.07:0,51,492
chr10	92810329	.	TAA	T	4712.57	PASS	AB=0.769;AC=22;AF=0.393;AN=56;BaseQRankSum=-2.520;DP=601;FS=0.000;HRun=12;HaplotypeScore=124.2675;InbreedingCoeff=0.8396;MQ=65.10;MQ0=0;MQRankSum=5.372;QD=18.34;ReadPosRankSum=5.921;VQSLOD=3.4385;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:36:83.72:0,84,1125	0/0:2,0:11:32.61:0,33,298	0/1:20,0:14:22.16:22,0,66	0/0:8,0:5:8.96:0,9,83	0/0:13,0:26:41.87:0,42,392	1/1:0,17:19:35.55:400,36,0	1/1:5,13:18:24.01:244,24,0	0/0:26,0:27:48.63:0,49,695	0/0:10,0:18:39.01:0,39,366	0/0:15,0:25:51.28:0,51,540	0/0:12,0:21:37.68:0,38,348	1/1:4,15:19:42.07:427,42,0	1/1:9,13:22:36.06:366,36,0	1/1:6,15:21:42.07:427,42,0	0/0:3,0:17:45.06:0,45,426	1/1:2,21:23:44.94:458,45,0	0/0:30,0:30:69.22:0,69,993	1/1:1,22:23:57.13:579,57,0	0/0:11,0:22:39.53:0,40,426	0/0:5,0:19:30.06:0,30,310	0/0:10,0:10:14.67:0,15,146	0/1:4,15:29:86.41:325,0,86	1/1:3,16:19:41.97:427,42,0	1/1:3,20:23:51.09:519,51,0	1/1:2,19:21:51.10:519,51,0	0/0:9,0:31:61.31:0,61,542	0/0:5,0:24:51.05:0,51,502	0/0:4,0:18:33.06:0,33,335
chr10	92810384	.	GTT	G	2607.32	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-5.183;DP=686;FS=0.490;HRun=4;HaplotypeScore=157.3388;InbreedingCoeff=0.9983;MQ=91.23;MQ0=0;MQRankSum=-0.351;QD=39.50;ReadPosRankSum=-2.319;VQSLOD=1.8029;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,2018	1/1:0,7:7:21.07:300,21,0	0/0:33,0:33:87.30:0,87,1581	0/0:23,0:23:69.22:0,69,1221	0/0:25,0:25:75.20:0,75,1322	0/0:24,0:24:66.23:0,66,1230	0/0:25,0:25:72.25:0,72,1347	1/1:0,26:26:78.24:1109,78,0	0/0:19,0:19:57.20:0,57,1063	0/0:30,0:30:90.29:0,90,1620	0/0:23,0:23:66.23:0,66,1236	0/0:27,0:27:75.26:0,75,1400	0/0:28,0:28:84.27:0,84,1509	0/0:24,0:24:69.24:0,69,1285	1/1:0,33:33:93.30:1340,93,0	0/0:36,0:36:99:0,99,1826	0/0:27,0:27:78.27:0,78,1441	0/0:29,0:29:87.26:0,87,1581	0/0:24,0:24:60.18:0,60,1057	0/0:22,0:22:63.16:0,63,1095	0/0:19,0:19:57.20:0,57,1067	0/0:30,0:30:90.30:0,90,1652	0/0:12,0:12:30.10:0,30,562	0/0:19,0:19:54.19:0,54,1001	0/0:19,0:19:54.19:0,54,1011	0/0:29,0:29:84.27:0,84,1535	0/0:24,0:24:69.24:0,69,1292	0/0:11,0:11:33.10:0,33,585
chr10	92811500	.	CTT	C	418.90	PASS	AB=1.000;AC=5;AF=0.357;AN=14;BaseQRankSum=3.363;DP=137;FS=0.000;HRun=16;HaplotypeScore=83.7677;MQ=89.25;MQ0=3;MQRankSum=1.344;QD=6.44;ReadPosRankSum=2.001;VQSLOD=0.0912;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,18:29:37.76:340,38,0	0/0:7,0:8:18.02:0,18,151	0/1:9,0:6:10.88:11,0,19	0/0:10,0:7:0.47:0,0,1	./.	./.	./.	1/1:15,8:24:19.57:160,20,0	./.	./.	./.	./.	./.	./.	0/0:21,0:23:47.80:0,48,447	./.	0/0:23,0:25:37.59:0,38,615	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	92811589	.	C	CAA	282.53	PASS	AC=20;AF=0.526;AN=38;BaseQRankSum=6.575;DP=189;FS=49.938;HRun=0;HaplotypeScore=43.1254;InbreedingCoeff=0.6445;MQ=103.49;MQ0=6;MQRankSum=-0.525;QD=12.84;ReadPosRankSum=-6.135;VQSLOD=0.7785;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,100,1655	0/0:9,0:9:27.09:0,27,441	0/0:21,0:19:54.18:0,54,867	0/0:21,0:17:43.61:0,44,707	./.	1/1:1,1:2:5.51:57,6,0	./.	0/0:27,0:26:78.26:0,78,1217	1/1:3,0:2:4.87:18,5,0	./.	./.	1/1:1,0:1:3:28,3,0	1/1:0,1:1:3.01:50,3,0	./.	0/0:15,0:15:36.12:0,36,587	./.	0/0:28,0:28:81.28:0,81,1322	1/1:0,2:2:5.99:70,6,0	1/1:5,0:3:2.84:14,3,0	0/0:4,0:3:0:0,0,0	./.	1/1:1,0:1:3:26,3,0	1/1:3,0:3:4.50:27,5,0	1/1:1,2:3:8.99:99,9,0	1/1:1,0:1:3.01:33,3,0	0/0:2,0:2:0:0,0,0	./.	./.
chr10	92811839	.	AT	A	5509.86	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=2.873;DP=609;FS=3.308;HRun=8;HaplotypeScore=69.3470;InbreedingCoeff=0.9932;MQ=69.99;MQ0=0;MQRankSum=0.484;QD=23.85;ReadPosRankSum=3.422;VQSLOD=5.6802;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.29:0,96,1160	0/0:9,0:9:21.06:0,21,254	0/0:15,0:15:19.24:0,19,194	0/0:6,1:7:11.52:0,12,98	0/0:24,1:25:40.22:0,40,754	1/1:1,22:23:63.10:608,63,0	1/1:4,23:27:54.08:522,54,0	0/0:38,0:38:93.27:0,93,1104	0/0:26,0:26:57.17:0,57,688	0/0:23,0:23:66.20:0,66,787	0/0:18,0:18:45.14:0,45,543	1/1:0,14:15:44.10:412,44,0	1/1:0,16:16:45.07:435,45,0	1/1:5,15:20:45.07:434,45,0	0/0:18,0:18:51.16:0,51,616	1/1:1,21:22:60.10:579,60,0	0/0:31,0:31:84.24:0,84,1002	1/1:1,22:23:66.11:637,66,0	0/0:28,0:28:81.21:0,81,962	0/0:20,0:20:60.18:0,60,725	0/0:8,0:8:24.07:0,24,290	1/1:1,13:14:27.04:261,27,0	1/1:0,19:19:48.08:463,48,0	1/1:0,22:22:60.10:579,60,0	1/1:5,25:28:60.09:579,60,0	0/0:25,1:26:43.24:0,43,804	0/0:32,0:32:87.22:0,87,1027	0/0:21,0:18:48.15:0,48,580
chr10	92812065	.	GTGCT	G	5117.29	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=5.576;DP=547;FS=5.695;HRun=0;HaplotypeScore=143.8901;InbreedingCoeff=0.9755;MQ=75.97;MQ0=1;MQRankSum=-9.182;QD=33.01;ReadPosRankSum=1.025;VQSLOD=4.5522;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,2147	0/0:14,0:14:42.13:0,42,1021	0/0:29,0:25:5.03:0,5,940	0/0:30,0:19:21.77:0,22,490	0/0:16,0:16:45.12:0,45,1007	1/1:1,9:10:24.05:386,24,0	1/1:4,6:10:18.06:314,18,0	0/0:31,0:31:78.22:0,78,1701	0/0:18,0:18:54.13:0,54,1144	0/0:24,0:24:72.08:0,72,1553	0/0:18,0:18:48.15:0,48,1159	1/1:6,8:14:18.05:283,18,0	1/1:4,12:16:39.12:671,39,0	1/1:4,10:14:33.02:538,33,0	0/0:15,0:15:45.12:0,45,1028	1/1:2,12:14:36.08:614,36,0	0/0:17,0:17:51.15:0,51,1173	1/1:6,3:9:21.04:337,21,0	0/0:16,0:15:42.09:0,42,880	0/0:21,0:21:54.16:0,54,1261	0/0:32,0:32:84.11:0,84,1601	1/1:4,7:11:21.02:325,21,0	1/1:5,9:14:30.07:484,30,0	1/1:5,10:15:15.01:243,15,0	1/1:8,20:28:57.09:923,57,0	0/0:23,0:23:63.19:0,63,1404	0/0:34,0:34:99:0,102,2311	0/0:16,0:16:42.11:0,42,912
chr10	92812102	.	A	ATC	2380.32	PASS	AB=0.988;AC=22;AF=0.393;AN=56;BaseQRankSum=11.346;DP=603;FS=10.016;HRun=0;HaplotypeScore=141.8483;InbreedingCoeff=0.8280;MQ=55.68;MQ0=26;MQRankSum=-6.932;QD=10.53;ReadPosRankSum=-4.758;VQSLOD=1.7764;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:39:48.09:0,48,620	0/0:17,0:17:27.09:0,27,370	0/0:29,0:17:16.85:0,17,185	0/1:39,0:19:5.25:5,0,169	0/0:20,0:16:30.10:0,30,412	1/1:14,3:15:22.55:250,23,0	1/1:17,2:16:11.85:176,12,0	0/0:26,0:21:54.06:0,54,620	0/0:18,0:17:36.56:0,37,458	0/0:27,0:22:57.98:0,58,701	0/0:16,0:14:24.08:0,24,328	1/1:19,1:15:5.54:71,6,0	1/1:16,2:16:24.01:278,24,0	1/1:14,1:15:27.50:367,27,0	0/0:22,0:22:18.05:0,18,231	1/1:20,2:20:8.35:299,8,0	0/0:27,0:25:51.15:0,51,628	0/1:6,0:4:9.81:88,0,10	0/0:23,0:15:37.98:0,38,407	0/0:24,0:19:30.10:0,30,411	0/0:24,0:22:36.10:0,36,474	1/1:14,2:11:15.03:180,15,0	1/1:16,3:16:20.35:293,20,0	1/1:10,0:10:11.58:105,12,0	1/1:21,3:21:36.11:481,36,0	0/0:22,0:20:16.22:0,16,482	0/0:25,0:24:52.57:0,53,682	0/0:13,0:10:21.07:0,21,288
chr10	92812104	.	CTCTA	C	2083.57	PASS	AB=0.806;AC=21;AF=0.375;AN=56;BaseQRankSum=11.041;DP=591;FS=10.113;HRun=0;HaplotypeScore=149.2285;InbreedingCoeff=0.7249;MQ=53.66;MQ0=28;MQRankSum=-6.984;QD=9.47;ReadPosRankSum=-4.406;VQSLOD=0.4607;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:40:48.14:0,48,739	0/0:17,0:17:27.09:0,27,431	0/0:25,0:14:16.79:0,17,178	0/1:38,0:17:30.20:30,0,163	0/0:20,0:16:30.10:0,30,514	1/1:11,6:15:4.22:216,4,0	1/1:16,3:16:10.32:170,10,0	0/0:25,0:19:52.32:0,52,537	0/0:18,0:17:36.56:0,37,497	0/0:27,0:22:60.70:0,61,786	0/0:16,0:13:24.08:0,24,398	1/1:18,3:16:6.02:72,6,0	0/1:9,9:16:5.33:236,0,5	1/1:7,8:15:26.30:319,26,0	0/0:21,0:21:18.05:0,18,231	1/1:13,7:18:10.11:263,10,0	0/0:28,0:26:55.07:0,55,1000	0/1:4,2:4:52.19:85,0,52	0/0:22,0:15:39.44:0,39,446	0/0:25,0:19:30.09:0,30,513	0/0:24,0:22:36.12:0,36,524	1/1:12,4:11:15.03:179,15,0	1/1:11,7:15:19.35:253,19,0	1/1:8,2:10:11.99:106,12,0	1/1:10,12:19:34.16:359,34,0	0/0:21,0:20:48.45:0,48,674	0/0:25,0:24:52.71:0,53,682	0/0:13,0:10:21.07:0,21,288
chr10	92812158	.	CTCTA	C	6064.16	PASS	AB=0.824;AC=38;AF=0.760;AN=50;BaseQRankSum=-1.872;DP=575;FS=5.780;HRun=0;HaplotypeScore=139.3348;InbreedingCoeff=0.1315;MQ=46.64;MQ0=27;MQRankSum=3.628;QD=12.06;ReadPosRankSum=-1.273;VQSLOD=4.0435;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:37:13.18:383,0,13	1/1:18,0:18:20.57:314,21,0	0/0:1,0:1:3.01:0,3,39	0/0:1,0:1:3.01:0,3,40	./.	1/1:10,10:18:12.35:206,12,0	0/1:12,4:11:52.62:90,0,53	0/0:18,0:1:2.74:0,3,12	1/1:6,21:25:3.89:38,4,0	1/1:7,18:20:7.33:689,7,0	0/1:3,14:14:0:0,0,0	1/1:4,18:16:3.48:37,3,0	./.	1/1:4,6:10:3.48:53,3,0	1/1:32,0:32:48.16:820,48,0	0/1:13,9:20:11.77:337,0,12	0/1:42,0:39:25.57:26,0,1154	0/1:7,1:5:29.05:93,0,29	1/1:10,7:9:18.06:301,18,0	1/1:8,20:23:3.01:51,3,0	1/1:7,12:17:4.26:54,4,0	1/1:7,9:11:15.05:256,15,0	1/1:15,10:22:27.27:422,27,0	1/1:10,2:12:11.88:205,12,0	1/1:16,15:28:34.04:542,34,0	1/1:8,24:29:22.15:1042,22,0	1/1:2,20:21:5.76:102,6,0	./.
chr10	92812162	.	A	ATC	6254.32	PASS	AB=0.850;AC=40;AF=0.800;AN=50;BaseQRankSum=-1.907;DP=562;FS=5.672;HRun=0;HaplotypeScore=128.6826;InbreedingCoeff=0.0603;MQ=48.48;MQ0=22;MQRankSum=3.727;QD=12.43;ReadPosRankSum=-0.505;VQSLOD=3.8173;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,35:37:12.67:404,0,13	1/1:1,18:19:20.10:329,20,0	0/0:2,0:2:2.17:0,2,37	0/0:4,0:4:4.67:0,5,77	./.	1/1:15,4:17:13.57:220,14,0	0/1:18,0:13:52.69:90,0,53	1/1:13,0:3:0.03:21,0,0	1/1:24,1:24:4.26:40,4,0	1/1:25,0:21:5.35:687,5,0	0/1:16,0:13:0:0,0,0	1/1:21,0:16:3.01:37,3,0	./.	1/1:10,0:10:3.01:52,3,0	1/1:0,33:33:48.16:862,48,0	0/1:15,7:20:12.58:354,0,13	0/1:42,0:39:25.24:25,0,1019	0/1:6,2:5:28.87:99,0,29	1/1:14,0:8:18.06:301,18,0	1/1:25,0:21:2.95:51,3,0	1/1:16,1:15:3.01:54,3,0	1/1:11,5:11:15.05:269,15,0	1/1:18,7:22:27.55:440,28,0	1/1:6,5:11:12.04:216,12,0	1/1:21,10:28:33.04:564,33,0	1/1:29,0:27:17.95:1038,18,0	1/1:22,0:20:5.95:102,6,0	./.
chr10	92812231	.	AGAGCAC	A	8787.71	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=11.308;DP=553;FS=26.120;HRun=0;HaplotypeScore=156.6408;InbreedingCoeff=0.9879;MQ=79.98;MQ0=1;MQRankSum=-15.907;QD=51.09;ReadPosRankSum=-1.206;VQSLOD=2.8262;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:99:0,99,3500	0/0:18,0:18:48.16:0,48,1640	0/0:22,0:21:59.63:0,60,1930	0/0:15,0:15:36.12:0,36,1135	0/0:29,0:29:81.28:0,81,2846	1/1:0,16:16:38.96:717,39,0	1/1:1,13:14:27.09:637,27,0	0/0:20,0:20:46.89:0,47,1771	0/0:28,0:27:51.18:0,51,1770	0/0:31,0:31:81.28:0,81,2854	0/0:19,0:19:42.14:0,42,1454	1/1:1,8:9:24.08:566,24,0	1/1:2,5:7:15.05:354,15,0	1/1:1,12:13:36.12:850,36,0	0/0:19,0:19:45.15:0,45,1559	1/1:0,16:16:36.12:850,36,0	0/0:31,0:31:78.27:0,78,2779	1/1:1,6:7:15.01:303,15,0	0/0:18,0:17:48.16:0,48,1662	0/0:19,0:19:51.18:0,51,1776	0/0:23,0:23:57.20:0,57,2031	1/1:3,21:24:65.96:1236,66,0	1/1:0,20:20:57.20:1344,57,0	1/1:2,15:17:15:354,15,0	1/1:3,26:29:69.19:1576,69,0	0/0:25,0:25:72.25:0,72,2490	0/0:17,0:17:24.08:0,24,852	0/0:6,0:6:12.04:0,12,407
chr10	92812746	.	A	ACC	6592.67	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-0.376;DP=446;FS=4.350;HRun=8;HaplotypeScore=102.4519;InbreedingCoeff=0.6946;MQ=76.46;MQ0=3;MQRankSum=-5.027;QD=19.05;ReadPosRankSum=0.896;VQSLOD=3.3300;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,21:31:62.66:922,63,0	0/0:5,0:5:15.04:0,15,161	0/1:37,0:21:13.63:14,0,247	0/0:19,0:17:2.40:0,2,183	1/1:13,0:15:29.46:278,29,0	1/1:4,11:15:27.09:415,27,0	1/1:5,9:15:27.09:409,27,0	0/0:26,0:26:51.66:0,52,440	1/1:7,0:15:33.04:308,33,0	1/1:7,0:7:5.75:40,6,0	1/1:5,0:6:0.75:23,1,0	1/1:1,2:16:27.05:282,27,0	1/1:5,3:16:33.07:385,33,0	1/1:2,0:9:15.02:143,15,0	0/0:21,0:21:60.14:0,60,642	1/1:1,21:22:57.19:899,57,0	0/0:29,0:29:72.18:0,72,803	1/1:5,0:17:33.07:350,33,0	1/1:9,0:13:29.99:276,30,0	1/1:5,0:5:2.22:28,2,0	1/1:7,0:19:17.92:167,18,0	1/1:5,2:11:21.04:247,21,0	1/1:1,1:6:12.02:134,12,0	1/1:3,5:15:26.04:335,26,0	1/1:3,2:12:11.61:157,12,0	1/1:12,1:23:43.91:379,44,0	1/1:11,0:19:39.05:369,39,0	1/1:2,0:2:3.01:31,3,0
chr10	92812747	.	C	CG	1023.72	PASS	AB=0.808;AC=15;AF=0.268;AN=56;BaseQRankSum=8.251;DP=446;FS=1.608;HRun=0;HaplotypeScore=114.7659;InbreedingCoeff=0.7225;MQ=76.60;MQ0=3;MQRankSum=-8.803;QD=9.06;ReadPosRankSum=2.203;VQSLOD=3.8976;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:37.87:0,38,255	0/0:5,0:5:15.05:0,15,207	0/0:37,0:21:29.56:0,30,439	0/0:20,0:18:2.09:0,2,214	1/1:8,6:15:19.14:155,19,0	0/0:15,0:15:28.86:0,29,152	0/0:15,0:15:36.55:0,37,222	0/0:26,0:26:73.57:0,74,628	1/1:9,5:14:32.69:237,33,0	0/1:4,1:5:3.38:16,0,3	0/1:4,2:6:4.48:15,0,4	0/0:17,0:17:26.70:0,27,131	0/0:17,0:17:25.51:0,26,103	0/0:9,0:9:15.90:0,16,76	0/0:22,0:22:63.20:0,63,853	0/0:23,0:23:51.73:0,52,268	0/0:29,0:29:87.21:0,87,1126	0/0:18,0:18:27.06:0,27,158	1/1:6,6:12:31.01:202,31,0	1/1:3,3:6:5.58:33,6,0	0/1:13,3:16:0.25:44,0,0	0/0:11,0:11:25.57:0,26,138	0/0:8,0:8:11:0,11,53	0/0:15,0:15:23.33:0,23,159	0/0:12,0:12:10.88:0,11,102	1/1:13,8:22:6.14:248,6,0	1/1:9,8:17:37.91:256,38,0	0/0:1,1:2:1.82:0,2,5
chr10	92812754	.	C	CCCCA	6714.23	PASS	AB=0.964;AC=34;AF=0.607;AN=56;BaseQRankSum=1.623;DP=470;FS=1.306;HRun=0;HaplotypeScore=111.9879;InbreedingCoeff=0.1234;MQ=78.04;MQ0=3;MQRankSum=-6.440;QD=18.97;ReadPosRankSum=0.630;VQSLOD=4.4886;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:5.70:102,0,6	0/0:6,0:6:15.05:0,15,227	0/0:38,0:21:22.01:0,22,468	0/0:22,0:21:29.29:0,29,353	1/1:3,5:16:36.39:622,36,0	0/1:14,0:14:7.44:30,0,7	0/1:13,0:13:40.08:61,0,40	0/1:6,0:27:91.96:92,0,222	1/1:8,4:13:36.08:687,36,0	1/1:3,1:5:15:175,15,0	1/1:1,1:8:14.84:140,15,0	0/1:17,0:17:12.22:309,0,12	0/1:22,0:22:30.83:323,0,31	1/1:10,0:10:15.52:200,16,0	0/0:23,0:23:60.20:0,60,898	0/1:28,0:28:57.78:87,0,58	0/0:26,0:26:78.22:0,78,1375	0/1:16,0:16:4.10:356,0,4	1/1:6,6:12:32.96:565,33,0	1/1:1,2:12:23.77:238,24,0	1/1:8,3:11:24.44:283,24,0	0/1:13,0:13:72.82:198,0,73	0/1:10,0:10:50.87:102,0,51	0/1:18,0:18:17.31:191,0,17	0/1:14,0:14:8.36:126,0,8	1/1:11,8:20:54.05:907,54,0	1/1:12,7:20:54.06:865,54,0	1/1:0,1:2:3.01:54,3,0
chr10	92812762	.	AC	A	597.14	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.249;DP=500;FS=0.794;HRun=4;HaplotypeScore=101.4726;InbreedingCoeff=0.9204;MQ=79.01;MQ0=3;MQRankSum=1.417;QD=19.26;ReadPosRankSum=5.251;VQSLOD=2.6997;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:78.15:0,78,920	1/1:0,6:6:15.05:179,15,0	0/0:38,0:22:34.91:0,35,400	0/0:23,0:21:12.49:0,12,400	0/0:16,0:16:38.90:0,39,335	0/0:17,0:17:42.09:0,42,511	0/0:15,0:15:39.11:0,39,484	0/0:26,0:26:77.39:0,77,648	0/0:11,0:11:23.82:0,24,204	0/0:11,0:11:32.97:0,33,302	0/0:10,0:10:27.03:0,27,268	0/0:16,0:16:30.07:0,30,365	0/0:23,0:23:45.04:0,45,499	0/0:9,0:9:21:0,21,222	1/1:3,22:25:45.14:537,45,0	0/0:27,0:27:66.18:0,66,840	0/0:27,0:27:81.26:0,81,1081	0/0:17,0:17:32:0,32,329	0/0:14,0:14:38.63:0,39,362	0/0:15,0:15:36.60:0,37,317	0/0:12,0:12:23.93:0,24,214	0/0:15,0:15:35.96:0,36,400	0/0:11,0:11:23.62:0,24,303	0/0:20,0:20:38.94:0,39,438	0/0:14,0:14:27.04:0,27,309	0/0:21,0:21:50.04:0,50,452	0/0:21,0:21:50.34:0,50,439	0/0:3,0:3:5.99:0,6,49
chr10	92813043	.	C	CGG	1549.25	PASS	AB=0.785;AC=22;AF=0.393;AN=56;BaseQRankSum=-0.320;DP=565;FS=31.338;HRun=0;HaplotypeScore=113.0850;InbreedingCoeff=0.6669;MQ=75.53;MQ0=0;MQRankSum=-1.309;QD=9.87;ReadPosRankSum=-1.682;VQSLOD=1.0191;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:62.03:0,62,573	1/1:1,3:5:2.56:47,3,0	0/0:17,0:17:42.04:0,42,503	0/0:20,0:18:30.16:0,30,507	0/1:2,3:10:0.15:15,0,0	0/0:22,0:22:66.17:0,66,946	0/0:20,0:20:54.17:0,54,792	0/1:14,0:14:2.74:3,0,94	1/1:0,18:23:33.07:431,33,0	1/1:5,2:8:1.83:31,2,0	0/1:8,2:10:7.10:67,0,7	0/0:33,0:33:93.31:0,93,1373	0/0:39,0:39:96.32:0,96,1431	0/0:31,0:31:81.26:0,81,1191	1/1:1,9:11:21.54:290,22,0	0/0:30,0:30:87.28:0,87,1288	0/0:46,0:46:99:0,138,2239	0/0:22,0:22:63.06:0,63,895	1/1:8,6:18:17.06:257,17,0	1/1:7,2:9:5.18:98,5,0	1/1:3,7:12:2.06:75,2,0	0/0:18,0:18:51.17:0,51,735	0/0:15,0:15:42.13:0,42,600	0/0:41,0:41:99:0,117,1700	0/0:18,0:18:51.17:0,51,760	0/1:10,4:15:2.27:157,0,2	1/1:1,13:16:18.06:232,18,0	1/1:6,0:6:3.01:34,3,0
chr10	92813044	.	AG	A	6867.58	PASS	AB=1.000;AC=23;AF=0.426;AN=54;BaseQRankSum=-6.365;DP=554;FS=5.811;HRun=8;HaplotypeScore=83.6218;InbreedingCoeff=0.8799;MQ=75.09;MQ0=0;MQRankSum=3.154;QD=22.74;ReadPosRankSum=4.201;VQSLOD=5.4510;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:93.13:0,93,1033	0/0:4,0:4:2.84:0,3,14	0/1:17,0:17:1.52:2,0,248	0/0:20,0:18:26.30:0,26,226	./.	1/1:4,17:21:51.08:493,51,0	1/1:4,16:20:42.06:406,42,0	0/0:15,0:15:24.41:0,24,229	0/0:20,0:20:32.13:0,32,160	0/0:9,0:9:8.81:0,9,59	0/0:10,0:10:8.65:0,9,48	1/1:3,30:33:81.12:782,81,0	1/1:1,37:38:93.15:898,93,0	1/1:2,29:31:75.12:724,75,0	0/0:13,0:13:28.77:0,29,157	1/1:3,26:29:75.11:724,75,0	0/0:46,0:46:99:0,129,1558	1/1:2,19:21:57.09:551,57,0	0/0:19,0:19:40.91:0,41,267	0/0:5,0:5:8.58:0,9,44	0/0:15,0:15:11.63:0,12,72	1/1:1,17:18:48.08:463,48,0	1/1:2,13:15:36.06:348,36,0	1/1:4,37:41:99:1014,105,0	1/1:1,17:18:48.08:464,48,0	0/0:15,0:15:17.40:0,17,104	0/0:14,0:14:16.94:0,17,83	0/0:4,0:4:5.79:0,6,38
chr10	92814551	.	CT	C	9774.43	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=1.850;DP=514;FS=13.037;HRun=6;HaplotypeScore=82.9576;InbreedingCoeff=0.8103;MQ=65.13;MQ0=0;MQRankSum=-1.880;QD=23.22;ReadPosRankSum=1.662;VQSLOD=3.6809;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:9.49:26,9,0	1/1:11,0:11:4:10,4,0	0/0:12,0:6:0.06:0,0,39	0/0:8,0:6:5.34:0,5,55	1/1:14,23:37:87.11:864,87,0	1/1:3,20:23:60.62:645,61,0	1/1:2,13:15:27.07:290,27,0	0/0:27,0:27:11.92:0,12,122	1/1:5,10:15:39.08:409,39,0	1/1:5,13:18:48.09:495,48,0	1/1:3,18:21:54.12:568,54,0	1/1:1,13:14:30.04:310,30,0	1/1:1,19:20:51.08:528,51,0	1/1:0,18:18:42.11:451,42,0	0/0:29,0:29:6.95:0,7,56	1/1:8,17:25:63.06:629,63,0	0/0:17,0:17:42.07:0,42,528	1/1:1,12:13:33.08:354,33,0	1/1:4,14:18:48.11:506,48,0	1/1:6,16:23:63.12:655,63,0	1/1:1,2:3:6:57,6,0	1/1:2,13:15:41.47:426,41,0	1/1:3,13:16:30.07:321,30,0	1/1:0,11:11:24.06:258,24,0	1/1:3,19:22:51.17:575,51,0	1/1:6,9:15:33.02:339,33,0	1/1:8,19:27:69.08:700,69,0	1/1:2,11:13:36.03:358,36,0
chr10	92814557	.	TA	T	3638.54	PASS	AB=0.995;AC=35;AF=0.625;AN=56;BaseQRankSum=1.903;DP=525;FS=5.188;HRun=10;HaplotypeScore=109.3940;InbreedingCoeff=-0.2749;MQ=63.59;MQ0=0;MQRankSum=1.785;QD=7.35;ReadPosRankSum=9.892;VQSLOD=0.4730;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:59.99:520,60,0	1/1:0,10:10:29.99:260,30,0	0/0:11,0:4:7.72:0,8,45	0/1:9,0:8:3.34:3,0,23	0/1:34,0:34:7.80:172,0,8	1/1:22,0:22:19.94:103,20,0	0/1:16,0:16:28.96:29,0,35	1/1:4,22:26:65.92:557,66,0	0/1:16,0:16:31:82,0,31	0/1:20,0:19:23.92:97,0,24	0/1:21,0:21:8.80:135,0,9	1/1:14,0:14:22.25:77,22,0	1/1:20,0:20:35.71:134,36,0	1/1:19,0:19:4.09:56,4,0	1/1:2,25:27:62.90:538,63,0	0/1:23,0:23:33.44:148,0,33	0/0:19,0:19:54:0,54,536	1/1:13,0:13:3.18:58,3,0	0/1:21,0:20:32.49:95,0,32	0/1:25,0:25:11.49:128,0,11	0/1:4,0:4:16.56:22,0,17	0/1:18,0:18:31.09:31,0,48	0/1:15,0:15:17.67:44,0,18	0/1:12,0:12:5.74:32,0,6	0/1:21,0:21:19.74:56,0,20	0/1:18,0:18:53.52:54,0,58	0/1:30,0:28:79.82:128,0,80	0/1:14,0:14:11.02:78,0,11
chr10	92814573	.	GCAA	G	7395.45	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=7.338;DP=525;FS=4.329;HRun=0;HaplotypeScore=118.7815;InbreedingCoeff=0.9878;MQ=57.42;MQ0=0;MQRankSum=-12.589;QD=33.92;ReadPosRankSum=-0.499;VQSLOD=5.1367;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:69.24:0,69,1400	0/0:13,0:13:30.10:0,30,623	0/0:15,0:12:30.06:0,30,555	0/0:7,0:5:14.37:0,14,201	1/1:5,23:28:64.46:930,64,0	0/0:23,0:23:63.20:0,63,1276	0/0:15,0:15:42.14:0,42,872	0/0:29,0:29:63.21:0,63,1279	1/1:3,10:13:33.11:482,33,0	1/1:7,16:22:51.15:719,51,0	1/1:6,15:21:45.14:639,45,0	0/0:10,0:10:21.07:0,21,438	0/0:20,0:20:45.14:0,45,899	0/0:17,0:17:45.15:0,45,933	0/0:23,0:23:48.16:0,48,1000	1/1:4,19:23:60.20:890,60,0	0/0:20,0:20:48.16:0,48,980	0/0:15,0:15:42.11:0,42,834	1/1:5,17:21:51.07:671,51,0	1/1:6,17:23:47.77:677,48,0	1/1:3,4:7:8.96:126,9,0	0/0:21,0:21:45.15:0,45,911	0/0:13,0:13:30.09:0,30,587	0/0:11,0:11:27.09:0,27,558	0/0:25,0:25:60.19:0,60,1195	1/1:4,17:21:57.18:824,57,0	1/1:4,23:27:72.18:1039,72,0	1/1:1,9:10:27.09:400,27,0
chr10	92815061	.	CAA	C	4039.72	PASS	AB=0.673;AC=25;AF=0.446;AN=56;BaseQRankSum=4.453;DP=559;FS=9.056;HRun=14;HaplotypeScore=82.0631;InbreedingCoeff=0.7647;MQ=80.53;MQ0=1;MQRankSum=0.462;QD=14.43;ReadPosRankSum=6.018;VQSLOD=2.1813;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:23:41.38:194,41,0	0/1:2,1:12:3.82:4,0,90	0/0:16,0:12:18.02:0,18,202	0/1:18,0:20:21.89:22,0,100	0/0:24,0:31:78.67:0,79,981	1/1:3,18:22:38.85:408,39,0	1/1:2,15:17:39.03:361,39,0	1/1:6,24:30:65.61:586,66,0	0/0:24,0:24:65.69:0,66,871	0/0:23,0:28:63.12:0,63,786	0/0:18,0:18:45.10:0,45,593	1/1:3,12:16:17.87:213,18,0	1/1:4,23:27:44.80:586,45,0	1/1:1,13:14:30.02:278,30,0	0/0:3,1:14:1.20:0,1,108	0/0:11,0:17:41.08:0,41,464	0/0:9,0:11:20.56:0,21,261	1/1:1,19:23:29.50:356,29,0	0/0:19,0:22:54.16:0,54,703	0/0:16,0:18:51.15:0,51,679	0/0:12,0:15:36.08:0,36,430	1/1:5,17:22:10.86:279,11,0	0/1:5,7:15:27.89:149,0,28	1/1:4,11:16:20.81:241,21,0	1/1:4,14:20:35.54:364,36,0	0/0:18,0:22:51.13:0,51,634	0/0:29,0:32:75.16:0,75,946	0/0:7,0:11:31.53:0,32,327
chr10	92815956	.	A	AGT	1379.10	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.857;DP=649;FS=0.000;HRun=0;HaplotypeScore=81.9561;InbreedingCoeff=0.9988;MQ=77.31;MQ0=0;MQRankSum=-1.829;QD=43.10;ReadPosRankSum=-5.249;VQSLOD=2.9742;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,114,1614	0/0:13,0:13:36.12:0,36,516	0/0:13,0:13:33.11:0,33,461	0/0:15,0:15:42.14:0,42,586	0/0:23,0:23:66.22:0,66,944	0/0:19,0:19:54.18:0,54,774	0/0:27,0:27:78.26:0,78,1117	1/1:5,27:32:84.26:1474,84,0	0/0:21,0:21:63.21:0,63,903	0/0:32,0:32:93.31:0,93,1320	0/0:12,0:12:33.11:0,33,473	0/0:33,0:33:96.32:0,96,1369	0/0:28,0:28:81.25:0,81,1135	0/0:22,0:22:66.22:0,66,945	0/0:26,0:26:72.24:0,72,1031	0/0:17,0:17:48.16:0,48,688	0/0:20,0:20:57.19:0,57,817	0/0:20,0:20:51.03:0,51,682	0/0:22,0:22:60.20:0,60,860	0/0:26,0:26:78.21:0,78,1060	0/0:20,0:20:54.15:0,54,737	0/0:28,0:28:78.26:0,78,1118	0/0:21,0:21:60.20:0,60,860	0/0:28,0:28:84.28:0,84,1202	0/0:24,0:24:66.22:0,66,946	0/0:29,0:29:81.26:0,81,1146	0/0:25,0:25:69.23:0,69,989	0/0:10,0:10:30.10:0,30,430
chr10	92816531	.	TACATGTGTGCGCCATGAA	T	10555.20	PASS	AB=0.953;AC=20;AF=0.357;AN=56;BaseQRankSum=7.704;DP=1484;FS=5.676;HRun=0;HaplotypeScore=580.7834;InbreedingCoeff=-0.5666;MQ=55.88;MQ0=36;MQRankSum=3.011;QD=8.41;ReadPosRankSum=5.501;VQSLOD=-0.0256;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:62,0:54:99:487,0,1338	0/1:17,0:15:99:234,0,331	0/0:8,0:4:6.41:0,6,152	0/0:16,0:8:17.64:0,18,235	0/1:19,23:38:98.17:98,0,823	0/0:17,0:17:46.15:0,46,777	0/0:49,0:49:99:0,129,2087	0/0:45,0:39:55.13:0,55,1112	0/1:95,0:74:99:719,0,1976	0/1:35,31:52:99:599,0,968	0/0:11,16:21:12.79:0,13,461	0/1:92,0:82:99:915,0,1767	0/1:112,0:94:99:982,0,2203	0/1:98,0:71:99:802,0,1811	0/1:70,0:65:99:613,0,2013	0/1:91,0:70:99:644,0,1352	0/0:32,0:32:87.24:0,87,1586	0/1:33,0:29:99:583,0,206	0/1:20,11:25:99:269,0,608	0/1:38,0:33:99:340,0,619	0/1:151,0:133:99:1042,0,2801	0/1:39,0:35:99:237,0,657	0/0:22,12:32:60.06:0,60,971	0/1:49,0:45:99:459,0,986	0/1:39,0:33:99:328,0,878	0/1:66,0:52:99:710,0,960	0/1:45,0:38:99:311,0,995	0/1:19,0:18:99:183,0,345
chr10	92817818	.	C	CGTGTGT	2152.14	PASS	AB=1.000;AC=27;AF=0.540;AN=50;BaseQRankSum=-4.742;DP=558;FS=0.783;HRun=0;HaplotypeScore=153.8083;InbreedingCoeff=0.6695;MQ=67.08;MQ0=20;MQRankSum=-4.056;QD=7.80;ReadPosRankSum=-4.449;VQSLOD=1.2779;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:28:15.04:354,15,0	./.	./.	./.	0/0:16,1:20:0:0,0,0	1/1:13,0:13:8.43:219,8,0	1/1:27,0:27:9.21:253,9,0	1/1:27,0:27:8.94:81,9,0	1/1:12,2:17:2.95:96,3,0	1/1:15,0:14:3.90:80,4,0	1/1:7,2:13:3.01:96,3,0	0/0:10,0:8:5.85:0,6,83	0/1:15,0:15:39.03:39,0,186	0/0:11,0:10:8.17:0,8,124	0/0:10,0:12:9.03:0,9,143	0/0:19,0:16:26.93:0,27,388	0/0:30,0:29:13.85:0,14,218	0/0:25,0:23:23.94:0,24,314	1/1:16,0:17:6.02:134,6,0	1/1:13,2:16:2.88:95,3,0	1/1:33,0:33:14.98:164,15,0	0/0:14,0:13:20.90:0,21,269	0/0:14,0:13:6.02:0,6,83	0/0:40,0:32:47.45:0,47,623	0/0:12,0:12:21.05:0,21,274	1/1:19,0:19:18.49:335,18,0	1/1:16,0:16:8.97:111,9,0	1/1:17,0:16:15.03:276,15,0
chr10	92817853	.	GTGT	G	823.95	PASS	AB=0.945;AC=11;AF=0.196;AN=56;BaseQRankSum=3.506;DP=532;FS=27.098;HRun=0;HaplotypeScore=102.4884;InbreedingCoeff=0.3688;MQ=53.00;MQ0=53;MQRankSum=-1.080;QD=4.93;ReadPosRankSum=-1.513;VQSLOD=0.3856;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:56.81:0,57,948	0/0:5,0:5:12.04:0,12,151	0/0:31,0:17:44.56:0,45,524	0/0:26,0:9:27.09:0,27,339	0/0:13,0:13:14.95:0,15,207	0/0:12,0:12:14.39:0,14,207	0/0:32,0:32:53.40:0,53,755	0/0:19,0:19:54.65:0,55,765	0/0:16,0:15:17.71:0,18,280	0/0:16,0:14:42.10:0,42,557	0/0:13,0:13:21.69:0,22,275	1/1:16,1:8:7.75:169,8,0	0/1:13,0:10:5.67:102,0,6	1/1:14,2:13:2.82:113,3,0	0/0:21,0:21:47.85:0,48,671	0/1:22,1:15:35.13:71,0,35	0/0:33,0:31:82.03:0,82,1162	0/1:20,2:15:76.75:144,0,77	0/0:9,0:9:27.05:0,27,416	0/0:16,0:16:18.73:0,19,277	0/0:19,0:19:30.10:0,30,567	0/0:16,0:12:10.54:0,11,29	1/1:14,0:11:9.72:137,10,0	0/1:41,3:28:20.68:210,0,21	0/1:14,0:12:12.23:28,0,12	0/0:12,0:12:33.11:0,33,688	0/0:14,0:14:36.11:0,36,586	0/0:14,0:13:20.28:0,20,360
chr10	92817855	.	GT	G	2961.43	PASS	AB=0.629;AC=17;AF=0.304;AN=56;BaseQRankSum=7.897;DP=524;FS=12.240;HRun=1;HaplotypeScore=81.0942;InbreedingCoeff=0.8932;MQ=53.61;MQ0=53;MQRankSum=1.174;QD=16.36;ReadPosRankSum=5.217;VQSLOD=2.5788;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:56.91:0,57,740	0/0:5,0:5:12.04:0,12,151	0/0:31,0:17:48.31:0,48,533	0/0:23,0:9:27.09:0,27,340	0/0:14,0:14:17.48:0,17,228	0/0:11,0:11:12.03:0,12,157	0/0:32,0:32:52.96:0,53,652	0/0:20,0:20:54.65:0,55,705	0/0:16,0:15:18.04:0,18,228	0/0:16,0:14:42.09:0,42,523	0/0:13,0:13:19.79:0,20,227	1/1:3,14:8:18.03:225,18,0	1/1:2,13:11:20.14:291,20,0	1/1:7,12:14:18.02:213,18,0	0/0:21,0:21:46.50:0,47,565	1/1:7,17:16:33.94:422,34,0	0/0:28,0:26:68.25:0,68,892	0/1:9,13:15:15:431,0,15	0/0:10,0:10:30.05:0,30,363	0/0:16,0:16:18.73:0,19,252	0/0:19,0:19:30.10:0,30,414	1/1:1,14:11:24.08:334,24,0	1/1:4,8:9:11.99:144,12,0	1/1:14,29:26:60.12:773,60,0	1/1:2,12:12:24.08:334,24,0	0/0:12,0:12:36.11:0,36,505	0/0:14,0:14:36.10:0,36,462	0/0:14,0:13:18.94:0,19,248
chr10	92818041	.	CCGCT	C	10517.52	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=10.156;DP=365;FS=8.233;HRun=0;HaplotypeScore=71.9566;InbreedingCoeff=0.9306;MQ=77.86;MQ0=0;MQRankSum=-6.558;QD=39.84;ReadPosRankSum=2.865;VQSLOD=4.7560;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:21:39.09:691,39,0	0/0:3,0:3:9.03:0,9,239	0/0:10,0:10:30.09:0,30,698	0/0:12,0:12:27.56:0,28,712	1/1:1,14:15:24.03:412,24,0	0/0:18,0:18:54.19:0,54,1423	0/0:19,0:19:48.13:0,48,1101	1/1:0,16:16:42.02:645,42,0	1/1:0,9:9:24.08:448,24,0	1/1:1,11:12:33.08:578,33,0	1/1:0,8:8:15.05:280,15,0	1/1:0,12:12:30.10:560,30,0	1/1:2,14:16:39.13:728,39,0	1/1:1,10:11:27.09:504,27,0	0/0:10,0:10:27.08:0,27,663	1/1:1,10:10:21.07:392,21,0	0/0:29,0:29:75.26:0,75,1997	1/1:1,16:17:42.14:784,42,0	1/1:2,14:16:36.12:671,36,0	1/1:1,5:6:12.04:224,12,0	1/1:3,26:29:57.15:1028,57,0	1/1:2,3:5:8.99:132,9,0	1/1:2,5:7:12.04:224,12,0	1/1:0,18:18:42.14:784,42,0	1/1:0,13:13:30.10:560,30,0	1/1:1,11:12:33.03:483,33,0	1/1:0,7:7:18.06:336,18,0	1/1:0,2:2:3.01:56,3,0
chr10	92818107	.	CAGTTG	C	1239.14	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.856;DP=386;FS=6.806;HRun=0;HaplotypeScore=103.2734;InbreedingCoeff=0.9511;MQ=82.86;MQ0=0;MQRankSum=-2.610;QD=33.49;ReadPosRankSum=-2.413;VQSLOD=2.7010;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,16:20:39.13:783,39,0	0/0:9,0:9:24.08:0,24,727	0/0:10,0:10:24.08:0,24,662	0/0:17,0:17:18.26:0,18,751	0/0:9,0:9:14.98:0,15,299	0/0:17,0:17:39.09:0,39,1109	0/0:15,0:15:45.15:0,45,1309	1/1:4,12:16:33.10:578,33,0	0/0:15,0:15:21.07:0,21,624	0/0:12,0:12:27.09:0,27,809	0/0:4,0:4:11.97:0,12,290	0/0:18,0:18:45.15:0,45,1296	0/0:16,0:16:39.08:0,39,1060	0/0:12,0:12:36.12:0,36,1089	0/0:7,0:7:18.04:0,18,478	0/0:16,0:15:33.10:0,33,915	0/0:21,0:21:60.11:0,60,1656	0/0:19,0:19:45.15:0,45,1305	0/0:18,0:18:33.11:0,33,996	0/0:9,0:9:21.07:0,21,627	0/0:24,0:24:48.08:0,48,1327	0/0:8,0:8:21.07:0,21,580	0/0:9,0:9:17.95:0,18,448	0/0:21,0:21:51.18:0,51,1540	0/0:13,0:13:36.06:0,36,975	0/0:12,0:12:27.09:0,27,816	0/0:12,0:12:36.12:0,36,1088	0/0:6,0:6:18.06:0,18,545
chr10	92818147	.	GTT	G	7022.25	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=2.936;DP=492;FS=6.444;HRun=10;HaplotypeScore=93.1891;InbreedingCoeff=0.9183;MQ=60.71;MQ0=12;MQRankSum=-4.624;QD=23.10;ReadPosRankSum=2.541;VQSLOD=4.3934;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:59.10:0,59,597	0/0:9,0:9:18.03:0,18,253	0/0:30,0:12:20.99:0,21,204	0/0:29,0:12:22.91:0,23,260	1/1:4,16:19:38.10:392,38,0	0/0:15,0:15:44.37:0,44,548	0/0:20,0:20:41.96:0,42,516	0/0:11,0:11:4.55:0,5,106	1/1:3,10:13:8.53:124,9,0	1/1:4,15:18:42.08:450,42,0	1/1:3,2:5:12.01:119,12,0	1/1:6,19:25:57.06:604,57,0	1/1:4,15:19:54.14:597,54,0	1/1:8,15:23:62.23:630,62,0	0/0:17,0:17:33.38:0,33,388	1/1:5,11:15:36.02:376,36,0	0/0:26,0:26:63.97:0,64,862	1/1:4,15:18:51.07:552,51,0	1/1:5,14:17:40.28:414,40,0	1/1:8,3:11:23.98:241,24,0	1/1:5,9:14:9.01:100,9,0	1/1:4,13:17:47.73:452,48,0	1/1:3,13:16:41.94:420,42,0	1/1:6,13:19:38.78:424,39,0	1/1:1,9:11:10.10:245,10,0	1/1:3,11:14:30.06:329,30,0	1/1:9,11:20:50.99:521,51,0	1/1:3,1:4:3.01:33,3,0
chr10	92818158	.	GT	G	1112.65	PASS	AB=0.899;AC=26;AF=0.464;AN=56;BaseQRankSum=-6.034;DP=540;FS=0.428;HRun=16;HaplotypeScore=115.5209;InbreedingCoeff=0.3014;MQ=52.02;MQ0=16;MQRankSum=-3.018;QD=3.27;ReadPosRankSum=-3.005;VQSLOD=-0.0191;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,1:34:35.18:111,35,0	0/1:4,1:6:21.14:21,0,50	0/1:37,0:8:5.71:6,0,21	0/1:39,0:13:8.02:8,0,20	1/1:13,8:22:39.32:200,39,0	0/1:16,0:16:5.95:6,0,126	0/1:17,1:20:10.44:10,0,188	1/1:5,0:4:2.03:5,2,0	1/1:12,2:14:12.95:67,13,0	1/1:18,5:23:22.80:156,23,0	0/1:5,4:8:10.39:44,0,10	0/0:23,0:23:43.28:0,43,239	0/0:20,0:20:48.86:0,49,258	0/0:23,0:22:51.27:0,51,281	0/0:14,0:14:5.80:0,6,134	1/1:8,9:17:17.92:148,18,0	0/0:24,0:24:44.57:0,45,378	0/0:24,0:23:53.62:0,54,267	0/1:21,2:21:22.08:94,0,22	1/1:10,5:15:19.67:119,20,0	0/1:8,3:11:10.55:39,0,11	0/0:16,0:16:28.86:0,29,160	0/0:16,0:15:34.48:0,34,190	0/0:22,0:22:53.97:0,54,274	0/0:18,0:18:42.50:0,43,223	1/1:8,6:14:19.57:120,20,0	0/1:22,5:28:17.20:140,0,17	0/1:2,0:2:9.16:9,0,18
chr10	92818179	.	C	CT	3052.15	PASS	AB=0.853;AC=17;AF=0.304;AN=56;BaseQRankSum=5.494;DP=516;FS=5.669;HRun=9;HaplotypeScore=103.6714;InbreedingCoeff=0.7611;MQ=51.33;MQ0=6;MQRankSum=-5.931;QD=14.20;ReadPosRankSum=4.779;VQSLOD=3.5198;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:56.65:0,57,475	0/0:5,0:5:11.97:0,12,99	0/0:31,0:9:6.36:0,6,96	0/1:32,0:12:3.84:4,0,64	0/1:23,1:24:0.44:0,0,227	0/0:12,0:12:17.38:0,17,150	0/0:18,0:18:29.59:0,30,255	0/0:13,0:12:32.95:0,33,284	0/0:11,0:11:17.94:0,18,146	0/0:24,0:24:38.91:0,39,331	0/0:11,0:10:20.82:0,21,166	1/1:3,18:21:54.13:580,54,0	1/1:9,8:18:23.11:280,23,0	1/1:5,18:22:54.10:579,54,0	0/0:14,0:14:14.03:0,14,118	0/0:19,0:17:23.89:0,24,204	0/0:25,0:25:38.51:0,39,330	1/1:8,15:24:24.86:464,25,0	0/0:14,0:14:23.99:0,24,208	0/0:17,0:17:31.13:0,31,250	0/0:12,0:12:23.21:0,23,202	1/1:3,14:17:33.09:365,33,0	1/1:5,9:13:18.05:199,18,0	0/1:7,15:24:57.08:359,0,57	1/1:4,13:17:39.06:418,39,0	0/0:14,0:14:23.96:0,24,208	0/0:29,0:29:56.77:0,57,481	0/0:2,0:2:6:0,6,51
chr10	92818503	.	G	GT	6889.22	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-10.223;DP=645;FS=5.074;HRun=2;HaplotypeScore=67.1607;InbreedingCoeff=0.9993;MQ=76.53;MQ0=0;MQRankSum=-3.082;QD=37.85;ReadPosRankSum=4.973;VQSLOD=5.3525;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,1498	0/0:13,0:13:39.12:0,39,482	0/0:16,0:16:44.69:0,45,483	0/0:20,0:19:43.19:0,43,613	0/0:21,0:21:45.14:0,45,558	0/0:20,0:20:57.17:0,57,694	0/0:25,0:25:55.42:0,55,778	0/0:46,0:46:99:0,120,1443	0/0:21,0:21:57.18:0,57,706	0/0:20,0:20:60.19:0,60,744	0/0:8,0:8:24.08:0,24,296	1/1:0,23:23:60.20:864,60,0	1/1:0,30:30:90.30:1296,90,0	1/1:1,26:27:72.24:1037,72,0	0/0:31,0:31:93.28:0,93,1140	0/0:22,0:22:66.19:0,66,805	0/0:21,0:21:63.17:0,63,765	1/1:0,17:17:42.14:604,42,0	0/0:16,0:15:42.13:0,42,521	0/0:15,0:15:39.12:0,39,483	0/0:33,0:33:87.26:0,87,1065	1/1:4,22:26:66.22:939,66,0	1/1:1,9:10:24.08:345,24,0	1/1:0,28:28:78.26:1123,78,0	1/1:0,21:21:48.16:682,48,0	0/0:35,0:35:99:0,102,1263	0/0:21,0:21:54.15:0,54,654	0/0:16,0:16:45.14:0,45,558
chr10	92820118	.	G	GTC	4657.12	PASS	AB=0.890;AC=32;AF=0.640;AN=50;BaseQRankSum=2.347;DP=699;FS=20.971;HRun=0;HaplotypeScore=130.8252;InbreedingCoeff=0.0703;MQ=33.28;MQ0=101;MQRankSum=-0.067;QD=8.26;ReadPosRankSum=-0.089;VQSLOD=2.6764;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,4:20:4.65:219,5,0	0/0:10,0:9:21.07:0,21,288	./.	./.	1/1:23,1:19:12.02:174,12,0	0/0:20,2:16:12.02:0,12,140	./.	0/1:35,6:28:99:258,0,405	0/1:38,2:34:9.07:252,0,9	0/1:25,5:18:52.84:377,0,53	1/1:13,3:12:9.03:142,9,0	0/1:20,5:20:5.20:393,0,5	1/1:17,3:17:8.28:208,8,0	1/1:23,3:22:11.71:198,12,0	0/0:42,0:33:48.16:0,48,658	1/1:20,2:18:17.43:238,17,0	0/0:41,0:32:57.78:0,58,735	0/1:22,3:15:37.80:147,0,38	0/1:21,2:12:99:168,0,170	0/1:21,4:20:61.98:136,0,62	1/1:26,12:26:9.50:160,10,0	1/1:16,1:13:6.02:101,6,0	1/1:12,4:15:17.95:216,18,0	1/1:32,6:30:9.01:129,9,0	0/1:14,1:13:28.49:96,0,28	0/1:34,3:20:99:460,0,143	0/1:26,5:24:61.39:456,0,61	1/1:7,2:6:9.03:128,9,0
chr10	92820120	.	CTCTG	C	3087.49	PASS	AB=0.829;AC=32;AF=0.615;AN=52;BaseQRankSum=3.336;DP=688;FS=20.395;HRun=0;HaplotypeScore=138.0679;InbreedingCoeff=-0.1075;MQ=32.44;MQ0=106;MQRankSum=0.916;QD=5.21;ReadPosRankSum=-2.240;VQSLOD=0.9283;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,2:20:1.65:168,2,0	0/0:10,0:9:21.07:0,21,544	./.	./.	1/1:16,7:18:12.01:128,12,0	0/1:23,0:17:2.09:2,0,71	0/1:20,0:7:0:0,0,0	0/1:38,0:25:88.99:89,0,664	0/1:25,14:33:75.85:249,0,76	0/1:23,5:16:99:267,0,106	1/1:14,3:13:8.75:74,9,0	0/1:16,7:18:14.26:219,0,14	0/1:10,9:16:2.81:186,0,3	1/1:14,11:20:10.52:166,11,0	0/0:42,0:33:48.16:0,48,1193	1/1:18,5:18:12.53:175,13,0	0/0:43,0:33:37.38:0,37,1361	0/1:25,0:13:83.62:84,0,88	0/1:22,3:13:67.67:68,0,314	0/1:15,9:19:83.33:83,0,123	1/1:41,0:25:7.97:75,8,0	1/1:12,5:12:4.24:28,4,0	1/1:13,2:13:8.97:185,9,0	1/1:37,4:31:8.80:121,9,0	0/1:6,9:13:64.43:85,0,64	0/1:29,7:19:99:421,0,308	0/1:21,11:24:99:285,0,191	0/1:6,3:6:39.87:89,0,40
chr10	92820122	.	CTG	C	510.79	PASS	AB=0.991;AC=22;AF=0.423;AN=52;BaseQRankSum=4.059;DP=677;FS=2.708;HRun=0;HaplotypeScore=135.3391;InbreedingCoeff=-0.1355;MQ=31.96;MQ0=110;MQRankSum=-1.508;QD=1.22;ReadPosRankSum=-2.762;VQSLOD=1.9229;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:20:16.66:33,0,17	0/0:10,0:9:21.07:0,21,405	./.	./.	0/1:23,0:18:7.93:19,0,8	0/0:23,0:16:10.58:0,11,64	1/1:18,0:5:0.47:1,0,0	0/0:35,0:24:4.29:0,4,713	0/1:36,2:32:45.01:45,0,54	0/1:28,0:15:47.88:48,0,125	0/1:18,0:14:8.02:8,0,15	0/1:22,0:17:21.51:22,0,102	0/1:18,0:15:6.43:43,0,6	1/1:25,0:20:6.47:41,6,0	0/0:42,0:32:48.15:0,48,882	1/1:23,0:18:0.33:27,0,0	0/0:40,2:32:23.45:0,23,972	0/1:25,0:12:53.60:57,0,54	0/0:24,1:13:1.76:0,2,265	0/0:23,0:19:1.71:0,2,115	0/0:41,0:25:7.34:0,7,36	0/0:17,0:12:0.94:0,1,16	1/1:15,0:13:10.77:82,11,0	1/1:39,1:29:7.33:41,7,0	0/1:16,0:13:19.99:20,0,43	0/1:35,0:18:99:126,0,241	0/1:28,2:23:20.75:21,0,191	0/1:9,0:6:18.79:27,0,19
chr10	92820130	.	GTCTC	G	1441.37	PASS	AB=0.804;AC=33;AF=0.660;AN=50;BaseQRankSum=3.339;DP=686;FS=12.134;HRun=0;HaplotypeScore=138.7907;InbreedingCoeff=-0.1742;MQ=29.59;MQ0=125;MQRankSum=1.256;QD=2.52;ReadPosRankSum=-3.832;VQSLOD=0.1575;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:38,2:21:2.31:43,2,0	0/0:10,0:9:21.07:0,21,530	./.	./.	1/1:16,7:17:0.94:3,1,0	1/1:23,0:15:1.72:5,2,0	./.	0/1:34,0:22:25.38:25,0,229	0/1:22,14:31:99:108,0,100	0/1:24,5:16:99:191,0,150	1/1:13,3:13:5.60:36,6,0	0/1:14,7:16:22.78:116,0,23	1/1:8,9:14:12.02:149,12,0	1/1:12,11:18:0.86:21,1,0	0/0:39,0:29:39.11:0,39,851	1/1:19,5:18:2.68:91,3,0	0/0:43,0:32:29.35:0,29,1229	0/1:24,0:11:40.57:41,0,112	0/1:24,3:18:18.87:19,0,276	0/1:13,10:18:38.70:39,0,83	1/1:38,0:23:3.87:41,4,0	1/1:12,5:11:3.47:27,3,0	1/1:9,2:10:5.23:49,5,0	1/1:36,4:28:2.05:42,2,0	0/1:9,9:14:34.20:34,0,44	0/1:30,7:19:99:264,0,312	0/1:20,11:23:99:160,0,137	0/1:8,3:7:68.01:85,0,68
chr10	92820134	.	C	CTG	561.48	PASS	AB=0.994;AC=29;AF=0.580;AN=50;BaseQRankSum=4.604;DP=686;FS=14.497;HRun=0;HaplotypeScore=131.8929;InbreedingCoeff=-0.2771;MQ=28.14;MQ0=134;MQRankSum=0.736;QD=0.99;ReadPosRankSum=-3.285;VQSLOD=0.8698;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:21:1.49:4,1,0	0/0:10,0:9:21.07:0,21,321	./.	./.	1/1:25,0:19:0.94:3,1,0	1/1:25,0:16:2.13:5,2,0	./.	0/1:32,0:20:41.22:41,0,324	0/1:33,1:29:6.49:6,0,37	0/1:28,0:15:77.57:78,0,131	0/1:19,0:15:5.83:19,0,6	0/1:21,0:16:35.93:36,0,40	0/1:16,0:13:3.09:30,0,3	0/1:23,0:18:1.35:17,0,1	0/0:38,1:27:39.11:0,39,554	0/1:21,0:16:25.41:43,0,25	0/0:44,0:32:43.80:0,44,788	0/1:25,0:12:40.08:40,0,71	0/1:28,2:17:99:108,0,286	0/1:21,0:17:16.35:16,0,63	1/1:38,1:24:2.69:8,3,0	1/1:18,0:12:3:25,3,0	1/1:13,0:10:5.91:58,6,0	1/1:40,2:28:2.24:23,2,0	0/1:17,0:13:22.70:23,0,36	0/1:39,0:18:73.90:74,0,242	0/1:29,0:19:34.29:34,0,100	0/1:11,0:7:8.45:8,0,38
chr10	92820144	.	CTG	C	402.84	PASS	AB=0.946;AC=11;AF=0.262;AN=42;BaseQRankSum=2.138;DP=685;FS=6.614;HRun=0;HaplotypeScore=114.2424;InbreedingCoeff=-0.0632;MQ=25.79;MQ0=146;MQRankSum=-4.347;QD=1.85;ReadPosRankSum=-3.215;VQSLOD=0.1322;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,3:21:6.14:0,6,30	0/0:11,0:10:24.07:0,24,412	./.	./.	./.	./.	./.	0/1:20,3:12:99:108,0,207	0/0:34,0:28:16.59:0,17,211	0/1:23,3:14:93.59:94,0,99	./.	0/0:17,1:11:3.53:0,4,115	0/1:19,0:13:6.76:7,0,102	1/1:24,1:17:1.87:10,2,0	0/0:40,0:28:33.08:0,33,540	0/1:20,1:16:3.44:3,0,11	0/0:44,0:32:51.88:0,52,785	0/1:23,0:11:4.19:4,0,112	0/1:28,2:16:99:166,0,243	0/0:18,2:15:6.02:0,6,116	0/0:39,0:23:2.36:0,2,17	./.	1/1:11,1:7:2.13:33,2,0	0/0:41,2:28:3.84:0,4,21	0/0:16,1:13:3.01:0,3,58	0/1:37,2:18:95.13:95,0,359	0/0:28,0:18:23.46:0,23,332	0/0:17,0:9:9.02:0,9,120
chr10	92820146	.	GTC	G	291.16	PASS	AB=0.935;AC=15;AF=0.357;AN=42;BaseQRankSum=3.550;DP=693;FS=9.169;HRun=0;HaplotypeScore=114.4686;InbreedingCoeff=-0.1557;MQ=25.47;MQ0=149;MQRankSum=-5.421;QD=0.82;ReadPosRankSum=-2.400;VQSLOD=1.2332;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:23:1.60:9,2,0	0/0:11,0:10:24.05:0,24,357	./.	./.	./.	./.	./.	0/1:18,0:12:83.13:83,0,138	0/0:35,0:28:10.23:0,10,189	0/1:24,2:14:70.74:71,0,120	./.	0/1:18,0:11:18.78:19,0,84	0/1:16,3:13:28.63:29,0,87	1/1:26,0:18:2.13:27,2,0	0/0:37,0:26:33.07:0,33,478	0/1:23,0:18:21.02:23,0,21	0/0:45,0:32:25.74:0,26,574	0/1:22,2:12:24.43:24,0,98	0/1:30,0:16:63.41:63,0,195	0/0:21,0:16:6.02:0,6,104	1/1:38,1:23:0.47:1,0,0	./.	0/0:11,0:6:0.89:0,1,2	0/1:36,8:29:8.32:8,0,32	0/0:17,0:13:3.01:0,3,52	0/1:39,1:18:59.36:59,0,324	0/0:26,1:16:18:0,18,300	0/0:17,0:9:8.39:0,8,106
chr10	92820152	.	CTCTG	C	145.97	PASS	AB=0.945;AC=6;AF=0.143;AN=42;BaseQRankSum=-0.628;DP=728;FS=1.307;HRun=0;HaplotypeScore=123.6309;InbreedingCoeff=0.0803;MQ=25.08;MQ0=154;MQRankSum=-3.059;QD=0.94;ReadPosRankSum=0.139;VQSLOD=2.2807;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,4:21:0.03:51,0,0	0/0:11,0:10:18.06:0,18,473	./.	./.	./.	./.	./.	0/1:22,0:12:82.32:82,0,144	0/0:38,0:31:11.69:0,12,228	0/1:26,1:17:32.68:33,0,178	./.	0/0:18,0:10:7.66:0,8,98	0/0:20,0:14:10.74:0,11,131	0/0:28,0:19:3.53:0,4,9	0/0:40,0:28:27.09:0,27,598	0/0:24,1:20:4.23:0,4,36	0/0:48,0:32:40.95:0,41,802	0/0:31,0:16:5.19:0,5,266	0/1:27,2:16:79.71:80,0,356	0/0:23,0:17:6.02:0,6,159	0/1:32,5:22:0.17:0,0,0	./.	0/0:12,0:7:1.82:0,2,5	0/0:47,3:34:4.83:0,5,62	0/0:18,0:14:3.01:0,3,81	0/0:41,0:20:36.22:0,36,429	0/0:30,0:18:18.04:0,18,386	0/0:16,1:9:11.23:0,11,144
chr10	92820160	.	CTG	C	236.06	PASS	AB=0.955;AC=9;AF=0.205;AN=44;BaseQRankSum=1.035;DP=781;FS=9.008;HRun=0;HaplotypeScore=126.7625;InbreedingCoeff=-0.1121;MQ=24.96;MQ0=161;MQRankSum=-2.565;QD=0.98;ReadPosRankSum=-0.554;VQSLOD=1.9695;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,2:22:3.08:0,3,9	0/0:9,0:8:18.06:0,18,337	./.	./.	./.	0/0:33,0:21:6.02:0,6,93	./.	0/1:27,2:16:67.99:77,0,68	0/0:39,1:32:11.57:0,12,169	0/0:27,0:19:27.83:0,28,365	./.	0/1:22,0:13:0.43:0,0,94	0/1:20,0:14:19.87:20,0,91	0/1:33,0:23:3.78:4,0,16	0/0:42,0:30:30.07:0,30,507	0/1:26,1:23:5.62:6,0,34	0/0:44,0:29:3.92:0,4,430	0/0:35,0:19:18.21:0,18,389	0/1:21,4:14:99:182,0,218	0/0:23,0:17:6.02:0,6,115	1/1:41,1:26:0.37:1,0,0	./.	0/0:14,1:10:1.82:0,2,5	0/0:55,0:39:4.83:0,5,61	0/0:20,0:16:3.01:0,3,57	0/1:39,2:19:52.17:52,0,275	0/0:35,0:22:29.93:0,30,415	0/0:19,0:11:12.99:0,13,92
chr10	92820176	.	CTG	C	365.08	PASS	AB=0.886;AC=10;AF=0.208;AN=48;BaseQRankSum=0.580;DP=790;FS=6.204;HRun=0;HaplotypeScore=128.4895;InbreedingCoeff=-0.2596;MQ=25.18;MQ0=161;MQRankSum=-2.704;QD=1.14;ReadPosRankSum=-0.941;VQSLOD=1.8680;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,2:25:3.61:0,4,14	0/0:7,0:6:15.05:0,15,287	./.	./.	./.	0/0:38,0:24:9.03:0,9,173	0/0:31,0:10:0:0,0,0	0/0:23,0:11:32.56:0,33,322	0/1:31,3:27:30.11:30,0,97	0/1:28,6:25:99:123,0,547	./.	0/1:20,6:16:58.55:65,0,59	0/1:10,5:11:52.92:76,0,53	0/1:30,3:22:1.50:2,0,120	0/0:43,0:30:27.08:0,27,488	0/1:26,1:24:5.81:6,0,10	0/1:42,0:26:4.96:5,0,508	0/1:32,5:20:65.99:66,0,415	0/0:26,0:15:17.61:0,18,365	0/0:22,2:20:9.01:0,9,121	0/0:43,4:32:1.38:0,1,22	0/0:13,2:10:3.01:0,3,55	0/0:13,3:11:6.02:0,6,97	0/0:40,15:39:6:0,6,82	0/0:13,3:13:2.96:0,3,19	0/1:34,2:18:96.57:97,0,359	0/1:29,8:24:16.84:17,0,388	0/0:16,0:9:5.38:0,5,58
chr10	92820194	.	GTCTC	G	1828.74	PASS	AB=0.996;AC=26;AF=0.542;AN=48;BaseQRankSum=1.482;DP=752;FS=1.421;HRun=0;HaplotypeScore=126.9763;InbreedingCoeff=-0.2457;MQ=27.43;MQ0=122;MQRankSum=-2.985;QD=3.57;ReadPosRankSum=0.184;VQSLOD=2.5150;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:44,0:24:0.59:11,1,0	0/1:5,0:5:10.90:11,0,116	./.	./.	0/0:39,0:34:0:0,0,1	0/1:35,0:24:22.87:23,0,149	0/0:29,0:12:2.96:0,3,19	1/1:13,11:9:27.09:442,27,0	0/1:27,0:22:43.95:102,0,44	0/1:43,0:31:99:507,0,354	./.	0/1:24,0:16:30.01:30,0,108	0/1:16,0:12:26.62:27,0,164	0/1:26,0:16:26.39:26,0,39	0/0:39,0:30:24.05:0,24,598	1/1:28,0:23:5.20:56,5,0	0/0:46,0:30:20.12:0,20,900	0/1:36,0:19:99:112,0,278	0/1:22,0:16:99:127,0,154	1/1:24,0:20:1.31:29,1,0	0/1:40,0:28:21.99:22,0,108	1/1:16,0:9:3.01:32,3,0	1/1:18,0:13:0.02:35,0,0	0/0:47,0:37:4.83:0,5,84	./.	0/1:36,0:20:99:142,0,386	0/1:31,0:20:99:125,0,321	1/1:15,0:8:9.03:113,9,0
chr10	92820200	.	CTCTG	C	3022.04	PASS	AB=0.803;AC=27;AF=0.519;AN=52;BaseQRankSum=0.467;DP=746;FS=2.863;HRun=0;HaplotypeScore=115.0928;InbreedingCoeff=-0.2185;MQ=28.96;MQ0=116;MQRankSum=-1.801;QD=5.42;ReadPosRankSum=-1.187;VQSLOD=2.0619;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,11:26:4.95:54,5,0	0/0:6,0:6:12.03:0,12,181	./.	./.	0/0:12,28:35:0:0,0,1	0/1:23,8:20:47.86:48,0,153	0/0:29,3:14:2.78:0,3,28	0/1:34,0:15:55.30:230,0,55	0/1:14,10:20:61.95:156,0,62	0/1:19,26:33:99:895,0,443	0/0:12,19:27:0:0,0,0	0/1:19,6:17:63.21:63,0,138	0/1:13,3:12:79.44:79,0,197	0/1:18,9:17:49.60:50,0,58	0/0:31,0:23:23.98:0,24,591	1/1:10,14:20:7.09:97,7,0	0/0:48,0:32:43.72:0,44,1034	0/1:25,8:18:99:145,0,311	0/1:17,4:15:99:262,0,259	1/1:8,16:21:2.04:55,2,0	0/1:27,8:27:65.36:65,0,142	1/1:7,9:11:3.01:57,3,0	1/1:9,8:12:2.98:57,3,0	0/1:40,4:33:42.30:42,0,75	1/1:10,3:10:9:100,9,0	0/1:24,14:22:99:329,0,373	0/1:23,8:21:99:218,0,338	1/1:9,7:9:9.03:170,9,0
chr10	92820286	.	G	GTC	4622.82	PASS	AB=0.885;AC=21;AF=0.375;AN=56;BaseQRankSum=-5.136;DP=679;FS=4.969;HRun=0;HaplotypeScore=106.6410;InbreedingCoeff=0.5370;MQ=58.84;MQ0=26;MQRankSum=-1.015;QD=12.81;ReadPosRankSum=0.425;VQSLOD=4.3032;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:23:39.12:0,39,468	0/0:6,0:6:9.03:0,9,108	0/0:48,0:16:3.70:0,4,48	0/1:92,0:25:1.99:2,0,129	1/1:23,11:32:48.62:734,49,0	0/0:19,0:17:23.86:0,24,276	0/0:11,0:11:2.09:0,2,181	0/1:21,0:18:16.17:16,0,38	1/1:14,8:21:24.06:354,24,0	1/1:9,11:17:33.11:528,33,0	1/1:9,6:14:14.99:240,15,0	0/1:16,1:16:18.10:18,0,272	0/0:20,0:18:39.11:0,39,456	0/0:20,0:16:14.62:0,15,179	0/0:29,0:28:41.58:0,42,503	0/1:11,6:16:13.84:275,0,14	0/0:26,0:25:14.44:0,14,437	0/0:17,0:15:29.68:0,30,334	1/1:10,10:18:27.09:432,27,0	1/1:16,13:29:3.34:540,3,0	1/1:13,7:15:15.03:214,15,0	0/0:16,0:14:30.09:0,30,360	0/0:17,0:17:44.96:0,45,506	0/0:36,0:32:21.67:0,22,412	0/0:15,0:15:30.08:0,30,348	0/1:14,7:20:38.80:387,0,39	1/1:16,12:24:57.18:883,57,0	0/0:5,0:4:3.01:0,3,36
chr10	92821670	.	AG	A	10101.64	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-0.280;DP=665;FS=6.326;HRun=9;HaplotypeScore=88.5246;InbreedingCoeff=0.9324;MQ=75.35;MQ0=0;MQRankSum=0.159;QD=21.63;ReadPosRankSum=1.827;VQSLOD=5.5322;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:41:75.08:0,75,524	0/0:11,0:12:20.88:0,21,212	0/1:10,0:10:2.94:3,0,116	0/0:22,0:22:10.77:0,11,380	1/1:3,18:21:51.02:467,51,0	0/0:8,0:30:51.57:0,52,300	0/0:6,0:28:54.36:0,54,334	1/1:6,22:28:56.09:507,56,0	1/1:1,20:21:48.03:439,48,0	1/1:5,22:27:60.02:549,60,0	1/1:1,25:26:69.04:631,69,0	1/1:4,30:34:90.04:824,90,0	1/1:1,16:17:42.02:384,42,0	1/1:2,18:20:51.02:467,51,0	0/0:31,1:32:41.74:0,42,734	1/1:4,21:25:60.03:549,60,0	0/0:31,1:32:56.79:0,57,907	1/1:4,14:18:39.01:357,39,0	1/1:2,18:20:53.97:477,54,0	1/1:0,15:15:35.99:329,36,0	1/1:7,20:27:57.02:522,57,0	1/1:1,20:21:60.03:549,60,0	1/1:2,26:28:75.03:686,75,0	1/1:4,24:28:69.03:632,69,0	1/1:5,14:19:36.01:329,36,0	1/1:5,14:19:42.02:384,42,0	1/1:1,28:29:75.03:686,75,0	1/1:1,13:14:36.01:330,36,0
chr10	92821944	.	T	TAAAAA	13089.97	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=5.210;DP=621;FS=3.326;HRun=10;HaplotypeScore=129.5249;InbreedingCoeff=0.8147;MQ=74.43;MQ0=2;MQRankSum=-8.114;QD=27.33;ReadPosRankSum=-4.411;VQSLOD=1.9847;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:42:99:0,108,1650	0/0:8,0:9:27.07:0,27,390	0/1:26,0:23:31.11:31,0,372	0/1:18,0:17:5.37:5,0,329	1/1:6,0:33:74.98:999,75,0	0/0:18,0:18:45.12:0,45,719	0/0:17,0:21:57.13:0,57,831	1/1:13,14:31:66.02:1202,66,0	1/1:6,0:17:27.05:433,27,0	1/1:11,2:29:54.14:848,54,0	1/1:8,0:23:38.99:551,39,0	1/1:4,4:12:21.07:499,21,0	1/1:10,1:15:15.05:314,15,0	1/1:3,0:9:9.03:214,9,0	0/0:29,0:30:71.58:0,72,1046	1/1:3,1:23:39.13:660,39,0	0/0:20,0:22:59.55:0,60,854	1/1:4,12:18:21.07:505,21,0	1/1:9,0:26:60.32:770,60,0	1/1:5,1:25:60.04:880,60,0	1/1:2,0:11:15.05:257,15,0	1/1:6,0:15:27.09:625,27,0	1/1:11,6:28:32.72:694,33,0	1/1:6,0:16:18.06:428,18,0	1/1:5,17:28:42.14:1010,42,0	1/1:11,0:28:62.17:893,62,0	1/1:11,2:31:51.05:806,51,0	1/1:2,0:15:27.09:463,27,0
chr10	92824851	.	C	CGT	2712.91	PASS	AB=0.965;AC=31;AF=0.596;AN=52;BaseQRankSum=3.443;DP=820;FS=2.892;HRun=0;HaplotypeScore=200.8597;InbreedingCoeff=-0.1138;MQ=64.75;MQ0=12;MQRankSum=-2.420;QD=4.08;ReadPosRankSum=-0.972;VQSLOD=2.8017;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:36,1:34:12.74:116,13,0	0/0:14,0:14:27.06:0,27,291	./.	0/0:44,0:32:3:0,3,31	0/1:22,0:22:26.09:45,0,26	0/1:22,6:27:99:358,0,156	1/1:19,5:23:6.78:189,7,0	0/1:31,0:28:54.16:59,0,54	0/1:32,0:33:14.72:281,0,15	1/1:38,0:38:17.24:355,17,0	./.	0/1:35,0:35:50.46:50,0,85	0/1:32,0:32:40.79:42,0,41	0/1:28,0:27:7.83:8,0,42	0/0:35,0:38:65.38:0,65,632	0/1:35,0:35:17.67:111,0,18	0/1:25,4:41:20.38:199,0,20	0/1:19,0:18:17.25:17,0,47	1/1:36,0:34:12.01:135,12,0	1/1:17,0:17:14.54:143,15,0	1/1:77,0:75:29.40:287,29,0	0/1:25,0:25:5.67:11,0,6	0/0:13,0:13:2.98:0,3,22	0/1:33,0:33:13.46:13,0,41	1/1:18,0:18:3:25,3,0	1/1:28,0:28:23.39:227,23,0	0/1:15,0:15:15.07:129,0,15	1/1:9,0:9:6.51:74,7,0
chr10	92824874	.	GTGTGTGTGTGTGTCTGTGTC	G	6368.28	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=-2.076;DP=778;FS=3.079;HRun=0;HaplotypeScore=325.5681;InbreedingCoeff=0.4572;MQ=42.53;MQ0=32;MQRankSum=-5.609;QD=17.59;ReadPosRankSum=-2.423;VQSLOD=2.8137;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:39:17.51:0,18,178	0/0:16,0:16:39.59:0,40,1905	0/0:26,0:4:2.98:0,3,22	0/0:36,0:9:14.90:0,15,144	0/1:16,0:16:8.61:137,0,9	0/0:27,0:26:47.51:0,48,1492	0/0:37,0:31:43.64:0,44,1297	0/1:28,0:22:19.62:349,0,20	1/1:26,0:26:2.12:706,2,0	1/1:39,0:37:43.19:1498,43,0	1/1:15,0:14:3:25,3,0	0/0:37,0:37:35.17:0,35,475	0/1:30,0:29:10.21:10,0,472	0/0:26,0:25:11.65:0,12,234	0/0:41,0:40:99:0,102,4611	1/1:28,0:28:27.46:507,27,0	0/0:39,0:38:42.68:0,43,1939	0/1:16,0:15:33.86:34,0,250	1/1:17,11:25:18.53:464,19,0	1/1:19,0:17:14.19:522,14,0	0/1:68,0:59:2.78:650,0,3	0/0:22,0:22:15.02:0,15,155	0/0:14,0:14:2.99:0,3,24	0/0:32,0:31:21.22:0,21,242	0/0:22,0:20:2.83:0,3,46	1/1:29,0:27:28.62:836,29,0	1/1:13,0:12:22.26:519,22,0	0/1:7,0:7:15:112,0,15
chr10	92824878	.	G	GTC	3697.43	PASS	AB=0.899;AC=19;AF=0.339;AN=56;BaseQRankSum=-1.033;DP=751;FS=0.000;HRun=0;HaplotypeScore=177.8680;InbreedingCoeff=-0.0816;MQ=40.76;MQ0=32;MQRankSum=-0.034;QD=8.29;ReadPosRankSum=2.254;VQSLOD=3.4270;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:37:11.94:12,0,63	0/0:15,0:15:39.07:0,39,507	0/0:24,0:2:2.98:0,3,22	0/0:37,0:7:17.91:0,18,184	0/1:11,5:16:16.93:117,0,17	0/1:28,0:27:99:132,0,279	0/1:40,0:34:22.95:23,0,196	0/1:27,1:22:99:167,0,144	0/1:14,10:24:8.83:462,0,9	0/1:27,11:36:65.62:678,0,66	1/1:12,2:13:3:25,3,0	0/0:35,0:35:29.95:0,30,397	0/0:29,0:28:45.07:0,45,350	0/0:23,0:22:28.12:0,28,222	0/0:41,0:40:99:0,108,1258	1/1:17,11:28:12.93:297,13,0	0/1:37,0:36:23.08:23,0,304	0/0:16,0:15:32.68:0,33,277	0/1:20,1:18:48.45:260,0,48	1/1:12,6:16:14.14:275,14,0	0/1:53,13:56:3.53:488,0,4	0/0:20,0:20:14.49:0,14,118	0/0:13,0:13:3.01:0,3,43	0/0:30,0:29:21.20:0,21,215	0/0:22,0:20:2.86:0,3,46	0/1:28,3:29:99:341,0,145	0/1:10,4:13:18.38:286,0,18	0/1:4,0:4:14.91:112,0,15
chr10	92824886	.	GTC	G	1674.24	PASS	AB=0.965;AC=28;AF=0.519;AN=54;BaseQRankSum=4.789;DP=729;FS=0.457;HRun=0;HaplotypeScore=179.8790;InbreedingCoeff=-0.1197;MQ=39.25;MQ0=37;MQRankSum=-5.102;QD=3.07;ReadPosRankSum=-4.488;VQSLOD=1.4560;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,4:41:29.54:87,0,30	0/0:15,0:15:34.34:0,34,533	0/0:28,0:1:2.99:0,3,24	0/0:38,0:3:1.86:0,2,39	0/1:16,0:16:12.42:12,0,27	0/1:30,0:29:37.66:38,0,386	0/1:41,0:35:28.44:28,0,241	0/1:21,0:16:12.13:138,0,12	0/1:22,0:22:31.07:31,0,49	0/1:34,0:33:25.42:158,0,25	./.	1/1:29,5:35:7.63:221,8,0	1/1:25,4:29:12.26:224,12,0	0/1:17,3:20:8.73:80,0,9	0/0:41,0:40:81.02:0,81,1268	0/1:27,0:27:22.24:30,0,22	0/0:34,1:34:36.37:0,36,422	1/1:10,0:11:8.77:62,9,0	1/1:19,0:17:1.23:48,1,0	0/1:18,0:16:0.92:1,0,16	0/1:56,1:48:15.19:15,0,31	1/1:17,1:19:9.01:100,9,0	0/0:11,1:12:2.80:0,3,13	0/1:26,3:29:5.28:125,0,5	1/1:19,1:19:5.99:50,6,0	0/1:31,0:28:3.74:316,0,4	0/1:12,1:12:25.24:25,0,30	1/1:5,0:5:5.33:43,5,0
chr10	92824890	.	G	GTC	715.01	PASS	AB=0.972;AC=17;AF=0.304;AN=56;BaseQRankSum=6.153;DP=700;FS=8.357;HRun=0;HaplotypeScore=181.5290;InbreedingCoeff=0.2352;MQ=38.07;MQ0=35;MQRankSum=-3.119;QD=2.26;ReadPosRankSum=1.371;VQSLOD=1.4894;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:39:7.37:7,0,116	0/0:16,0:16:42.14:0,42,627	0/0:27,0:1:3.01:0,3,36	0/0:36,0:2:5.95:0,6,64	0/1:15,0:15:10.08:10,0,16	0/0:29,0:28:45.45:0,45,481	0/0:38,1:32:31.46:0,31,494	0/1:19,0:15:5.38:5,0,124	1/1:19,0:19:10.64:110,11,0	0/1:26,3:28:86.21:258,0,86	0/1:14,1:14:0:0,0,0	0/0:36,0:36:1.92:0,2,215	0/0:29,0:29:7.93:0,8,184	0/1:21,0:20:12.27:12,0,109	0/0:41,0:40:99:0,108,1616	1/1:29,1:30:9.53:124,10,0	0/0:29,1:29:61.49:0,61,777	0/0:10,0:10:8.91:0,9,133	0/1:19,1:18:14.14:14,0,63	1/1:18,0:16:13.65:81,14,0	1/1:54,1:48:17.72:151,18,0	0/0:18,0:18:6.15:0,6,36	0/0:12,0:12:3.01:0,3,41	0/0:27,1:27:10.70:0,11,129	0/1:19,1:18:0:0,0,0	0/0:28,0:24:21.08:0,21,326	0/1:15,0:14:18.85:101,0,19	0/0:3,0:3:2.97:0,3,20
chr10	92824892	.	GTC	G	1312.77	PASS	AB=0.887;AC=22;AF=0.407;AN=54;BaseQRankSum=6.459;DP=676;FS=2.335;HRun=0;HaplotypeScore=172.4575;InbreedingCoeff=0.1792;MQ=37.71;MQ0=35;MQRankSum=-7.967;QD=3.43;ReadPosRankSum=-3.401;VQSLOD=2.0010;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:39:62.47:62,0,98	0/0:16,0:16:40.85:0,41,696	0/0:26,0:1:3.01:0,3,33	0/0:36,0:2:5.95:0,6,66	0/0:14,0:14:2.80:0,3,13	0/0:29,0:28:14.33:0,14,497	0/0:39,0:32:34.07:0,34,687	1/1:16,0:12:25.96:157,26,0	0/0:19,0:19:10.80:0,11,62	0/1:27,0:26:22.61:145,0,23	./.	0/1:23,12:35:2.40:192,0,2	0/1:21,7:27:4.49:209,0,4	0/1:12,9:20:32.06:50,0,32	0/0:40,0:39:74.43:0,74,1865	0/1:29,0:29:9.08:9,0,24	0/0:30,0:29:62.95:0,63,1105	1/1:6,2:8:7.40:108,7,0	1/1:20,0:18:7.13:80,7,0	0/0:16,0:15:8.48:0,8,29	0/1:48,2:45:18.73:19,0,33	1/1:10,8:18:8.87:70,9,0	0/0:10,2:12:2.84:0,3,14	0/1:21,5:25:20.34:42,0,20	0/1:15,4:17:0:0,0,0	1/1:28,0:24:10.96:281,11,0	0/1:15,0:14:32.96:46,0,33	1/1:2,0:2:2.37:8,2,0
chr10	92824898	.	GTC	G	1081.94	PASS	AB=0.945;AC=21;AF=0.404;AN=52;BaseQRankSum=7.039;DP=667;FS=18.484;HRun=0;HaplotypeScore=175.6211;InbreedingCoeff=0.2299;MQ=36.25;MQ0=36;MQRankSum=-6.988;QD=3.23;ReadPosRankSum=-3.379;VQSLOD=0.6955;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:0.51:0,1,52	0/0:16,0:16:40.49:0,40,708	0/0:28,0:1:3.01:0,3,45	0/0:40,0:3:6:0,6,72	0/0:14,0:14:2.37:0,2,8	0/0:28,0:27:5.93:0,6,404	0/0:41,0:34:39.08:0,39,642	0/1:18,0:15:27.42:27,0,88	0/0:17,0:17:11.12:0,11,50	0/1:25,0:25:47.93:48,0,53	./.	1/1:29,3:32:20.39:242,20,0	1/1:30,1:30:6.34:267,6,0	0/1:19,4:22:0.41:124,0,0	0/0:38,0:37:99:0,102,1858	0/1:30,0:30:8.87:9,0,21	0/0:31,0:30:59.65:0,60,1151	1/1:9,1:10:18.63:169,19,0	0/1:19,1:17:9.06:22,0,9	0/0:16,0:15:6.04:0,6,24	0/1:40,0:36:5.47:5,0,41	1/1:17,1:18:6.01:64,6,0	./.	1/1:20,5:24:8.74:89,9,0	0/1:11,8:17:0:0,0,0	0/1:29,0:25:30.49:100,0,30	0/1:14,0:13:5.14:54,0,5	1/1:1,0:1:2.96:19,3,0
chr10	92824900	.	CTG	C	250.86	PASS	AB=0.896;AC=14;AF=0.269;AN=52;BaseQRankSum=6.295;DP=661;FS=5.262;HRun=0;HaplotypeScore=176.6427;InbreedingCoeff=0.3336;MQ=35.57;MQ0=36;MQRankSum=-7.571;QD=1.17;ReadPosRankSum=-0.649;VQSLOD=2.3525;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:32:3.11:8,3,0	0/0:16,0:16:39.59:0,40,620	0/0:30,0:1:3.01:0,3,38	0/0:41,0:3:6.02:0,6,89	0/0:14,0:14:3.01:0,3,31	0/0:28,0:27:25.50:0,26,397	0/0:39,0:33:30.10:0,30,489	0/0:16,0:13:9.33:0,9,198	0/0:17,0:17:21.97:0,22,131	0/0:26,0:26:23.99:0,24,215	0/1:15,0:13:0:0,0,0	0/1:22,9:31:4.31:62,0,4	0/1:23,7:29:56.01:123,0,56	0/1:17,6:22:18.68:29,0,19	0/0:37,0:36:99:0,99,1603	0/0:29,0:29:11.25:0,11,82	0/0:30,0:29:36.36:0,36,983	1/1:7,2:9:9:126,9,0	0/0:19,0:16:10.04:0,10,74	0/0:16,0:15:8.61:0,9,49	0/0:40,0:36:7.26:0,7,82	1/1:10,7:17:2.88:15,3,0	./.	1/1:20,5:24:2.88:15,3,0	./.	0/1:29,0:25:6.28:6,0,136	0/0:15,0:14:4.70:0,5,39	0/1:1,0:1:0:0,0,0
chr10	92824902	.	G	GTC	458.72	PASS	AB=0.968;AC=13;AF=0.241;AN=54;BaseQRankSum=4.986;DP=668;FS=23.640;HRun=0;HaplotypeScore=177.0250;InbreedingCoeff=0.5170;MQ=35.30;MQ0=36;MQRankSum=-2.877;QD=2.67;ReadPosRankSum=-0.952;VQSLOD=0.6085;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:8.53:0,9,72	0/0:17,0:17:42.11:0,42,599	0/0:31,0:1:3.01:0,3,34	0/0:42,0:3:6.02:0,6,84	0/0:14,0:14:3.01:0,3,34	0/0:30,0:29:31.77:0,32,400	0/0:39,0:32:33.03:0,33,485	0/0:19,0:16:18.93:0,19,260	0/0:17,0:17:9.13:0,9,130	0/0:26,0:26:27.32:0,27,261	0/1:15,0:13:0:0,0,0	1/1:31,0:31:10.27:110,10,0	0/1:25,2:27:38.90:207,0,39	1/1:21,2:22:1.73:63,2,0	0/0:38,0:37:99:0,102,1493	0/0:29,0:29:9.82:0,10,73	0/0:31,0:30:61.30:0,61,933	1/1:8,1:9:14.73:171,15,0	0/0:18,0:15:14.65:0,15,97	0/0:15,0:14:4.38:0,4,18	0/0:38,0:34:1.29:0,1,82	1/1:18,0:18:2.87:19,3,0	./.	1/1:25,3:27:5.71:30,6,0	0/1:20,0:18:0:0,0,0	0/0:29,0:25:64.53:0,65,396	0/0:15,0:14:9.09:0,9,87	0/0:2,0:2:2.11:0,2,8
chr10	92824906	.	GTGTC	G	2112.58	PASS	AB=0.923;AC=23;AF=0.523;AN=44;BaseQRankSum=6.044;DP=662;FS=0.579;HRun=0;HaplotypeScore=169.4186;InbreedingCoeff=0.2986;MQ=34.82;MQ0=36;MQRankSum=-8.417;QD=5.76;ReadPosRankSum=-3.607;VQSLOD=1.7555;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,15:25:6.02:100,6,0	0/0:18,0:18:33.02:0,33,609	./.	0/0:46,0:4:8.04:0,8,85	./.	0/0:28,0:27:15.75:0,16,279	0/1:39,0:32:31.90:32,0,299	0/1:20,0:17:59.81:256,0,60	0/0:17,2:19:6.58:0,7,26	1/1:20,8:28:38.87:475,39,0	./.	1/1:28,0:29:4.51:12,5,0	0/1:28,0:26:21.96:22,0,35	0/1:22,0:21:7.50:7,0,32	0/0:38,0:37:81.23:0,81,1707	1/1:15,12:27:5.74:54,6,0	0/0:31,0:31:58.90:0,59,1320	0/1:8,0:8:4.33:4,0,37	1/1:19,3:18:11.22:190,11,0	0/1:8,7:15:6.01:16,0,6	0/1:28,6:28:0.01:0,0,0	./.	./.	./.	0/1:17,0:15:0.08:0,0,0	1/1:15,16:27:57.10:826,57,0	0/1:11,4:14:0.76:159,0,1	1/1:3,1:4:11.89:107,12,0
chr10	92824912	.	GTC	G	568.61	PASS	AB=0.941;AC=13;AF=0.260;AN=50;BaseQRankSum=9.440;DP=665;FS=17.225;HRun=0;HaplotypeScore=158.6285;InbreedingCoeff=-0.0365;MQ=34.28;MQ0=36;MQRankSum=-8.241;QD=2.24;ReadPosRankSum=2.909;VQSLOD=1.8479;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:26:0.44:0,0,92	0/0:16,0:16:42.61:0,43,739	0/0:36,0:3:8.94:0,9,66	0/0:53,0:5:12.02:0,12,176	0/0:14,1:15:2.60:0,3,10	0/0:27,0:26:19.51:0,20,386	0/0:39,1:33:32.92:0,33,539	0/0:21,0:21:38.85:0,39,466	0/1:14,5:19:5.09:79,0,5	0/1:28,2:30:59.85:60,0,308	./.	0/1:28,0:28:5.15:96,0,5	0/1:27,1:26:95.41:125,0,95	0/1:22,0:21:15.67:22,0,16	0/0:37,0:36:99:0,105,1818	0/0:23,5:28:9.16:0,9,53	0/0:32,0:32:55.13:0,55,1320	0/1:7,1:8:31.66:32,0,52	0/1:20,1:17:33.16:33,0,82	0/1:12,2:13:9.68:75,0,10	0/0:29,6:28:2.92:0,3,26	0/0:16,0:16:2.22:0,2,7	./.	./.	0/1:14,0:12:0.10:0,0,0	0/1:27,2:25:72.43:72,0,134	1/1:10,3:12:9.26:111,9,0	0/0:4,0:4:9.20:0,9,35
chr10	92824922	.	CTGTCTGTGTG	C	570.30	PASS	AB=0.972;AC=9;AF=0.188;AN=48;BaseQRankSum=5.540;DP=686;FS=18.478;HRun=0;HaplotypeScore=197.6906;InbreedingCoeff=0.4994;MQ=36.12;MQ0=24;MQRankSum=-2.862;QD=3.73;ReadPosRankSum=3.855;VQSLOD=1.6034;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:33.11:0,33,857	0/0:15,0:15:27.09:0,27,1044	0/0:29,0:4:12.04:0,12,277	0/0:47,0:7:12.04:0,12,212	0/0:14,0:14:6.02:0,6,85	1/1:23,3:24:8.27:73,8,0	0/1:40,4:37:32.46:285,0,32	0/0:21,0:21:48.09:0,48,760	0/0:14,0:14:9.03:0,9,126	0/0:35,0:33:32.60:0,33,576	0/0:16,0:15:0.47:0,0,1	1/1:23,0:23:11.61:156,12,0	0/1:29,0:27:5.48:123,0,5	1/1:19,0:18:2.86:17,3,0	0/0:41,0:40:87.28:0,87,3278	0/0:26,0:26:25.88:0,26,342	0/0:35,0:35:75.33:0,75,3072	0/1:12,0:12:8.92:51,0,9	0/0:24,0:19:28.41:0,28,357	0/0:19,0:18:15.52:0,16,236	0/0:42,0:36:24.55:0,25,376	./.	./.	./.	./.	0/0:29,0:26:35.97:0,36,559	0/0:16,0:15:14.75:0,15,261	0/0:7,0:7:19.43:0,19,211
chr10	92824926	.	CTG	C	276.92	PASS	AB=0.870;AC=8;AF=0.167;AN=48;BaseQRankSum=9.216;DP=700;FS=9.794;HRun=0;HaplotypeScore=152.2937;InbreedingCoeff=0.6804;MQ=36.64;MQ0=24;MQRankSum=-7.754;QD=2.41;ReadPosRankSum=5.517;VQSLOD=1.6657;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:28.18:0,28,485	0/0:14,0:14:36.11:0,36,598	0/0:26,0:4:11.95:0,12,152	0/0:48,0:8:18.05:0,18,224	0/0:15,0:15:6.02:0,6,77	0/0:27,0:25:10.45:0,10,143	0/0:40,2:36:32.76:0,33,339	0/0:24,0:23:48.84:0,49,579	0/0:14,0:14:12:0,12,132	0/0:35,0:33:45.66:0,46,536	0/0:15,0:14:0.47:0,0,1	1/1:12,11:23:11.93:140,12,0	1/1:23,8:29:9.79:171,10,0	0/1:13,7:19:3.47:7,0,3	0/0:40,0:39:99:0,102,1615	0/0:30,0:30:38.54:0,39,416	0/0:38,0:37:84.71:0,85,1383	1/1:11,2:13:10.23:86,10,0	0/0:23,0:19:31.33:0,31,372	0/0:19,0:18:15.01:0,15,166	0/0:46,0:40:30.06:0,30,373	./.	./.	./.	./.	0/1:28,0:24:3.41:3,0,160	0/0:17,0:16:21.55:0,22,273	0/0:7,0:7:20.11:0,20,180
chr10	92824932	.	G	GTGTCTGTC	811.38	PASS	AB=0.957;AC=11;AF=0.220;AN=50;BaseQRankSum=3.536;DP=737;FS=7.028;HRun=0;HaplotypeScore=199.2056;InbreedingCoeff=0.4385;MQ=37.99;MQ0=24;MQRankSum=-2.305;QD=4.32;ReadPosRankSum=-1.746;VQSLOD=1.0712;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:45.12:0,45,1081	0/0:15,0:15:32.60:0,33,790	0/0:19,0:4:12.04:0,12,252	0/0:43,0:9:15.05:0,15,266	0/0:18,0:18:9.02:0,9,180	1/1:16,11:26:13.27:238,13,0	0/1:43,3:40:35.20:287,0,35	0/0:25,0:24:62.84:0,63,971	0/0:16,0:16:11.45:0,11,233	0/0:35,0:32:77.47:0,77,1410	0/0:18,0:16:0.61:0,1,2	0/1:28,0:28:5.91:148,0,6	1/1:32,0:29:1.37:203,1,0	1/1:23,0:22:1.49:4,1,0	0/0:39,0:38:93.30:0,93,2383	0/0:29,0:29:32.95:0,33,714	0/0:37,0:36:95.74:0,96,2209	0/1:13,0:14:34.77:57,0,35	0/0:28,0:23:42.69:0,43,549	0/0:19,0:18:14.78:0,15,312	0/0:58,0:49:35.19:0,35,631	./.	./.	./.	1/1:17,0:15:0.75:2,1,0	0/0:27,0:24:65.65:0,66,913	0/0:16,0:15:31.82:0,32,507	0/0:8,0:8:24.08:0,24,442
chr10	92824938	.	G	GTC	417.17	PASS	AB=0.976;AC=10;AF=0.185;AN=54;BaseQRankSum=6.065;DP=760;FS=7.916;HRun=0;HaplotypeScore=154.5061;InbreedingCoeff=0.4771;MQ=39.33;MQ0=25;MQRankSum=-0.581;QD=2.23;ReadPosRankSum=-2.560;VQSLOD=1.6736;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:57.16:0,57,824	0/0:13,0:13:33.06:0,33,485	0/0:23,0:6:15.35:0,15,192	0/0:43,0:9:18.06:0,18,273	0/0:20,0:19:7.03:0,7,100	0/1:25,1:24:20.08:20,0,39	0/1:47,0:41:86.78:87,0,99	0/0:29,0:27:66.55:0,67,714	0/0:14,0:14:12.33:0,12,125	0/0:38,0:35:74.81:0,75,910	0/0:19,0:17:0.47:0,0,1	1/1:29,0:29:12.51:164,13,0	1/1:31,0:27:14.29:182,14,0	1/1:22,0:21:2.73:13,3,0	0/0:38,0:37:96.29:0,96,1417	0/0:28,0:28:38.80:0,39,431	0/0:41,0:40:99:0,105,1511	0/1:16,0:16:42.34:89,0,42	0/0:28,0:22:42.52:0,43,421	0/0:18,0:17:14.71:0,15,184	0/0:62,0:53:33.58:0,34,392	./.	0/0:20,2:21:0:0,0,0	0/0:26,0:25:0:0,0,0	0/1:15,1:15:0.06:0,0,0	0/0:29,0:26:64.44:0,64,795	0/0:15,0:14:32.15:0,32,356	0/0:8,0:8:23.93:0,24,245
chr10	92824940	.	G	GTC	170.17	PASS	AB=0.949;AC=12;AF=0.222;AN=54;BaseQRankSum=4.038;DP=758;FS=1.463;HRun=0;HaplotypeScore=152.2877;InbreedingCoeff=0.1285;MQ=39.47;MQ0=23;MQRankSum=-0.146;QD=0.61;ReadPosRankSum=-4.552;VQSLOD=0.8858;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:57.16:0,57,825	0/0:12,0:12:33.11:0,33,486	0/0:23,0:6:15.45:0,15,202	0/0:42,0:9:21.04:0,21,297	0/1:21,0:20:10.95:11,0,72	0/0:26,0:24:9.69:0,10,84	0/1:45,0:39:9.23:9,0,170	0/0:31,0:29:30.76:0,31,665	0/1:15,0:15:10.37:10,0,89	0/0:37,0:34:32.21:0,32,776	1/1:19,0:17:2.74:12,3,0	1/1:22,9:31:6.76:32,7,0	0/1:25,5:26:17.53:85,0,18	0/0:16,6:21:1.25:0,1,4	0/0:37,0:36:96.29:0,96,1416	0/0:29,0:29:34.57:0,35,378	0/0:40,0:39:99:0,108,1530	0/1:15,2:17:46.48:110,0,46	0/1:25,0:19:21.62:22,0,327	0/0:18,0:17:14.94:0,15,177	0/1:62,0:53:14.64:15,0,280	./.	0/0:20,1:20:2.80:0,3,13	0/0:20,5:24:0:0,0,0	0/1:13,3:15:0:0,0,0	0/0:30,0:27:9.65:0,10,646	0/0:16,0:15:31.77:0,32,286	0/0:9,0:9:15.33:0,15,211
chr10	92824942	.	GTGTC	G	6200.27	PASS	AB=0.921;AC=31;AF=0.574;AN=54;BaseQRankSum=4.019;DP=775;FS=7.313;HRun=0;HaplotypeScore=146.1051;InbreedingCoeff=0.5385;MQ=40.84;MQ0=22;MQRankSum=-4.362;QD=12.58;ReadPosRankSum=0.338;VQSLOD=3.7103;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:63.19:0,63,1375	0/0:12,0:12:29.84:0,30,695	0/0:24,0:6:16.56:0,17,198	0/0:44,0:10:20.59:0,21,289	1/1:16,7:22:15.03:229,15,0	0/0:26,0:24:12.09:0,12,162	0/1:45,0:39:35.31:35,0,275	1/1:33,0:31:48.74:378,49,0	1/1:6,9:15:14.95:253,15,0	0/1:13,24:34:99:1160,0,240	1/1:12,8:18:2.97:24,3,0	1/1:28,0:31:11.88:107,12,0	0/1:29,0:27:46.35:80,0,46	1/1:20,0:22:3:29,3,0	0/0:39,0:38:86.92:0,87,1930	1/1:13,16:29:41.62:701,42,0	0/0:41,0:40:99:0,99,2355	0/1:14,0:16:34.87:35,0,56	1/1:21,4:19:8.23:299,8,0	1/1:8,10:17:14.84:260,15,0	1/1:49,15:55:44.72:744,45,0	./.	0/0:17,0:20:2.60:0,3,10	0/1:26,0:25:0:1,0,0	0/0:10,0:14:1.14:0,1,3	1/1:19,12:28:63.02:885,63,0	1/1:7,10:16:32.94:545,33,0	1/1:5,4:9:27.04:436,27,0
chr10	92824946	.	CTGTCTGTCTGTG	C	1393.79	PASS	AB=0.925;AC=12;AF=0.222;AN=54;BaseQRankSum=3.974;DP=787;FS=0.810;HRun=0;HaplotypeScore=217.4441;InbreedingCoeff=0.6884;MQ=42.17;MQ0=23;MQRankSum=-1.613;QD=8.55;ReadPosRankSum=0.190;VQSLOD=2.6346;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:75.19:0,75,3295	0/0:12,0:12:33.11:0,33,1581	0/0:27,0:7:17.99:0,18,366	0/0:45,0:11:21.07:0,21,477	0/0:21,0:20:15.03:0,15,309	0/0:26,0:24:19.68:0,20,415	0/0:47,0:42:29.62:0,30,617	0/0:31,0:29:71.94:0,72,821	0/0:16,0:16:21.05:0,21,433	0/0:39,0:36:93.19:0,93,1756	0/0:21,0:19:7.38:0,7,100	1/1:22,10:32:11.62:405,12,0	1/1:24,7:27:19.38:628,19,0	./.	0/0:38,0:37:93.29:0,93,4134	0/0:30,0:30:48.15:0,48,1108	0/0:41,0:40:93.25:0,93,4886	0/1:15,1:16:9.24:398,0,9	0/0:24,0:17:35.36:0,35,444	0/0:18,0:17:15.52:0,16,403	0/0:66,0:55:45.58:0,46,999	0/1:18,2:20:0:0,0,0	1/1:17,3:19:3:26,3,0	1/1:27,1:27:0.81:1,1,0	1/1:14,2:15:1.04:74,1,0	0/0:31,0:28:77.61:0,78,1035	0/0:16,0:15:36.50:0,37,748	0/0:9,0:9:27.09:0,27,557
chr10	92824948	.	GTC	G	846.52	PASS	AB=0.971;AC=24;AF=0.429;AN=56;BaseQRankSum=9.286;DP=788;FS=9.745;HRun=0;HaplotypeScore=151.4028;InbreedingCoeff=0.3025;MQ=42.41;MQ0=20;MQRankSum=-0.358;QD=1.92;ReadPosRankSum=5.845;VQSLOD=1.5747;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:72.25:0,72,1387	0/0:11,0:11:32.14:0,32,571	0/0:27,0:7:17.09:0,17,277	0/0:45,0:10:21.02:0,21,323	0/1:21,0:20:4.88:20,0,5	0/0:25,0:24:19.87:0,20,287	0/0:45,0:41:30.05:0,30,438	0/0:32,0:29:72.93:0,73,613	0/1:15,1:16:21.44:21,0,44	0/1:41,0:38:99:131,0,325	0/0:22,0:20:5.87:0,6,35	1/1:31,1:32:11.93:143,12,0	0/1:29,2:27:19.94:160,0,20	0/1:22,2:23:0:0,0,0	0/0:39,0:38:99:0,102,1796	0/1:31,0:31:57.14:74,0,57	0/0:41,0:40:99:0,112,2126	0/1:17,0:17:25.75:112,0,26	0/1:23,0:17:0.06:0,0,191	1/1:17,0:17:12.37:46,12,0	1/1:64,0:53:18.59:101,19,0	0/0:17,1:18:0:0,0,0	1/1:21,0:20:1.25:3,1,0	0/1:25,3:27:0.12:0,0,0	1/1:15,1:15:1.24:29,1,0	0/1:33,0:30:40.08:40,0,244	1/1:16,0:15:10.71:73,11,0	1/1:9,0:9:12.11:63,12,0
chr10	92824958	.	G	GTGTC	707.51	PASS	AB=0.706;AC=14;AF=0.250;AN=56;BaseQRankSum=6.405;DP=846;FS=4.865;HRun=0;HaplotypeScore=193.1488;InbreedingCoeff=0.6683;MQ=44.12;MQ0=21;MQRankSum=-4.574;QD=3.04;ReadPosRankSum=-2.081;VQSLOD=2.3120;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:87.19:0,87,1483	0/0:12,0:12:36.12:0,36,655	0/1:27,0:6:0.39:0,0,167	0/0:43,0:8:15.01:0,15,217	0/0:24,0:23:18.06:0,18,303	0/0:29,0:29:22.55:0,23,305	0/0:45,0:41:22.67:0,23,341	0/0:35,0:29:77.60:0,78,1173	0/0:18,0:18:21.07:0,21,333	0/0:47,0:44:67.12:0,67,1182	0/0:23,0:20:4.52:0,5,79	1/1:22,1:39:14.23:137,14,0	1/1:20,0:26:20.90:306,21,0	0/1:12,1:26:0:0,0,0	0/0:37,0:36:93.30:0,93,1666	0/0:35,0:35:49.73:0,50,861	0/0:45,0:44:86.93:0,87,2062	0/1:7,0:22:24.13:228,0,24	0/0:20,0:15:25.49:0,25,348	0/0:22,0:22:20.83:0,21,301	0/0:73,0:62:56.65:0,57,881	1/1:18,0:21:5.99:48,6,0	1/1:11,0:18:3.01:48,3,0	0/1:10,0:34:0.25:0,0,0	1/1:9,0:14:5.89:94,6,0	0/0:29,0:25:26.52:0,27,686	0/0:19,0:19:34.85:0,35,556	0/0:9,0:9:27.08:0,27,392
chr10	92824960	.	G	GTC	205.12	PASS	AB=0.977;AC=7;AF=0.125;AN=56;BaseQRankSum=6.182;DP=846;FS=7.111;HRun=0;HaplotypeScore=176.6939;InbreedingCoeff=0.4733;MQ=44.53;MQ0=19;MQRankSum=-2.560;QD=1.67;ReadPosRankSum=0.672;VQSLOD=2.1182;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,99,1349	0/0:12,0:12:36.12:0,36,544	0/0:26,0:6:14.02:0,14,183	0/0:43,0:8:15.01:0,15,192	0/0:23,0:22:18.04:0,18,249	0/0:30,0:30:24.40:0,24,289	0/0:46,0:42:23.21:0,23,366	0/0:37,0:32:67.58:0,68,954	0/0:18,0:18:24.02:0,24,311	0/0:48,0:45:99:0,118,1297	0/0:20,0:18:6.20:0,6,92	0/1:37,1:38:33.68:34,0,54	1/1:28,4:28:23.80:219,24,0	0/0:24,2:25:0:0,0,0	0/0:38,0:37:96.30:0,96,1424	0/0:34,0:34:55.73:0,56,705	0/0:44,0:43:99:0,120,1784	0/1:21,1:22:55.85:56,0,86	0/0:20,0:15:34.38:0,34,349	0/0:24,0:24:23.73:0,24,258	0/0:73,0:62:56.64:0,57,708	0/0:19,1:20:5.97:0,6,46	1/1:16,1:17:1.13:3,1,0	0/0:36,1:37:0:0,0,1	0/1:14,0:13:0.13:16,0,0	0/0:29,0:25:61.47:0,61,686	0/0:19,0:19:46.67:0,47,519	0/0:9,0:9:27.07:0,27,322
chr10	92824978	.	CTGTG	C	600.98	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=0.352;DP=928;FS=4.899;HRun=0;HaplotypeScore=213.5605;InbreedingCoeff=0.8160;MQ=47.37;MQ0=24;MQRankSum=1.273;QD=6.60;ReadPosRankSum=0.622;VQSLOD=2.4059;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,127,2938	0/0:17,0:17:48.10:0,48,966	1/1:23,0:3:0.47:1,0,0	0/0:36,0:7:1.48:0,1,80	0/0:21,0:21:20.82:0,21,487	1/1:8,15:23:24.08:406,24,0	1/1:25,20:41:17.14:312,17,0	0/0:44,0:38:82.65:0,83,1600	0/0:25,0:25:43.04:0,43,1031	0/0:50,0:48:99:0,103,2067	0/0:24,0:22:15.05:0,15,358	0/0:40,0:40:32.85:0,33,491	0/0:34,0:31:48.92:0,49,890	0/0:29,0:29:15.05:0,15,313	0/0:46,0:45:99:0,107,2264	0/0:44,0:44:90.22:0,90,1989	0/0:48,0:47:99:0,126,2878	0/0:29,0:30:46.12:0,46,848	0/0:27,0:18:35.86:0,36,769	0/0:27,0:27:42.14:0,42,994	0/0:81,0:71:90.31:0,90,2122	0/0:18,0:19:14.69:0,15,324	0/0:22,0:22:14.66:0,15,324	0/0:44,0:43:26.13:0,26,608	0/0:15,0:15:18.06:0,18,449	0/0:27,0:24:63.20:0,63,1481	0/0:21,0:22:54.18:0,54,1249	0/0:10,0:10:21.07:0,21,446
chr10	92825028	.	CTGTG	C	11869.32	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=12.820;DP=923;FS=1.714;HRun=0;HaplotypeScore=186.8383;InbreedingCoeff=0.9843;MQ=55.29;MQ0=8;MQRankSum=-2.097;QD=31.82;ReadPosRankSum=1.615;VQSLOD=4.5075;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,165,4127	0/0:12,0:12:32.85:0,33,812	0/0:31,0:15:42.10:0,42,945	0/0:32,0:17:38.25:0,38,1017	1/1:2,24:26:21.07:398,21,0	0/0:31,0:31:63.20:0,63,1609	0/0:45,0:42:69.71:0,70,1693	1/1:4,19:20:57.19:1000,57,0	1/1:3,33:36:51.17:965,51,0	1/1:2,39:39:99:2067,114,0	1/1:2,15:17:24.04:418,24,0	0/0:48,0:48:81.25:0,81,1951	0/0:34,0:33:90.31:0,90,2378	0/0:31,0:31:54.18:0,54,1317	0/0:42,0:42:99:0,123,3168	1/1:1,43:44:72.23:1334,72,0	0/0:40,0:40:99:0,117,2981	0/0:33,0:33:72.25:0,72,1796	1/1:1,17:18:51.04:732,51,0	1/1:1,29:30:50.82:928,51,0	1/1:11,59:69:72.25:1366,72,0	0/0:23,0:23:56.83:0,57,1392	0/0:13,0:13:26.72:0,27,622	0/0:57,0:57:83.30:0,83,2096	0/0:18,0:18:45.15:0,45,1108	1/1:5,30:35:38.65:1522,39,0	1/1:2,24:26:54.66:1025,55,0	1/1:3,4:7:6.02:114,6,0
chr10	92826286	.	ATGCC	A	4273.49	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.915;DP=672;FS=6.005;HRun=0;HaplotypeScore=109.9025;InbreedingCoeff=0.9995;MQ=77.97;MQ0=1;MQRankSum=-5.155;QD=54.79;ReadPosRankSum=-0.117;VQSLOD=6.0607;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,3492	0/0:15,0:15:39.13:0,39,1050	0/0:28,0:28:78.27:0,78,2217	0/0:24,0:24:66.20:0,66,1650	0/0:25,0:25:72.23:0,72,1941	1/1:0,20:20:45.63:944,46,0	1/1:0,32:32:87.30:1823,87,0	1/1:0,26:26:75.21:1506,75,0	0/0:23,0:23:66.23:0,66,1913	0/0:27,0:27:75.26:0,75,2135	0/0:12,0:12:36.12:0,36,1016	0/0:28,0:28:84.29:0,84,2379	0/0:29,0:29:87.28:0,87,2412	0/0:18,0:18:54.19:0,54,1560	0/0:30,0:29:90.31:0,90,2558	0/0:26,0:26:78.27:0,78,2254	0/0:29,0:29:87.30:0,87,2413	0/0:14,0:14:42.14:0,42,1168	0/0:26,0:26:78.27:0,78,2178	0/0:14,0:14:42.14:0,42,1123	0/0:39,0:38:99:0,114,3149	0/0:24,0:24:72.22:0,72,1913	0/0:18,0:18:51.18:0,51,1474	0/0:29,0:29:87.26:0,87,2404	0/0:14,0:14:42.13:0,42,1153	0/0:28,0:28:81.17:0,81,2180	0/0:22,0:22:66.21:0,66,1708	0/0:9,0:9:27.09:0,27,779
chr10	92826888	.	C	CTACA	12931.59	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-11.873;DP=613;FS=11.867;HRun=0;HaplotypeScore=113.2235;InbreedingCoeff=0.9975;MQ=78.33;MQ0=0;MQRankSum=-6.017;QD=59.32;ReadPosRankSum=-0.149;VQSLOD=6.2897;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,114,2126	0/0:13,0:13:33.10:0,33,585	0/0:17,0:18:19.94:0,20,571	0/0:15,0:15:33.44:0,33,435	1/1:1,12:16:21.54:560,22,0	0/0:15,0:15:36.11:0,36,641	0/0:28,0:28:81.28:0,81,1512	0/0:30,0:30:66.21:0,66,1156	1/1:3,18:22:60.21:1584,60,0	1/1:4,15:19:54.19:1435,54,0	1/1:1,13:14:21.07:560,21,0	0/0:32,0:32:84.27:0,84,1537	0/0:24,0:24:63.22:0,63,1170	0/0:19,0:19:57.20:0,57,1064	0/0:19,0:19:48.16:0,48,896	1/1:7,18:25:63.22:1649,63,0	0/0:30,0:30:87.30:0,87,1624	0/0:32,0:32:93.30:0,93,1695	1/1:6,10:17:45.13:1069,45,0	1/1:2,12:14:27.09:719,27,0	1/1:6,23:29:48.16:1280,48,0	0/0:13,0:13:29.78:0,30,528	0/0:16,0:16:33.11:0,33,616	0/0:28,0:28:81.28:0,81,1512	0/0:21,0:21:63.20:0,63,1145	1/1:5,25:30:84.29:2237,84,0	1/1:1,19:22:44.95:1199,45,0	1/1:3,7:10:24.08:640,24,0
chr10	92827864	.	A	AT	1033.61	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-9.732;DP=625;FS=1.332;HRun=9;HaplotypeScore=59.9616;InbreedingCoeff=0.9812;MQ=72.68;MQ0=0;MQRankSum=-3.430;QD=21.53;ReadPosRankSum=1.490;VQSLOD=4.5212;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,43:48:66.84:1128,67,0	0/0:13,0:13:29.94:0,30,255	0/0:17,0:17:29.95:0,30,253	0/0:9,0:9:17.98:0,18,156	0/0:19,0:19:50.77:0,51,429	0/0:30,0:32:79.03:0,79,659	0/0:17,0:17:41.97:0,42,365	0/0:22,0:22:47.96:0,48,411	0/0:25,0:25:65.97:0,66,573	0/0:23,0:23:50.66:0,51,427	0/0:14,0:14:32.99:0,33,287	0/0:26,0:26:62.97:0,63,547	0/0:25,0:25:62.96:0,63,543	0/0:29,0:29:74.96:0,75,651	0/0:21,0:22:59.01:0,59,497	0/0:18,0:18:44.96:0,45,385	0/0:31,0:32:94.99:0,95,805	0/0:32,0:32:89.97:0,90,781	0/0:24,0:24:53.96:0,54,466	0/0:15,0:15:35.98:0,36,312	0/0:23,0:23:50.98:0,51,443	0/0:12,0:12:32.98:0,33,286	0/0:15,0:15:41.97:0,42,361	0/0:27,2:29:17.60:0,18,606	0/0:17,0:18:44.02:0,44,371	0/0:28,0:28:68.96:0,69,599	0/0:26,0:26:68.97:0,69,599	0/0:11,0:11:31.90:0,32,255
chr10	92833752	.	TA	T	367.51	PASS	AB=0.981;AC=7;AF=0.125;AN=56;BaseQRankSum=2.283;DP=565;FS=7.163;HRun=13;HaplotypeScore=63.0096;InbreedingCoeff=0.6693;MQ=54.62;MQ0=28;MQRankSum=1.426;QD=3.40;ReadPosRankSum=0.679;VQSLOD=-0.0926;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,3:33:21.31:0,21,651	0/0:5,0:5:6.01:0,6,58	0/1:50,1:11:15.80:16,0,43	0/0:48,1:8:10.73:0,11,89	0/0:22,0:23:24.29:0,24,206	1/1:6,2:8:5.88:44,6,0	1/1:12,9:20:23.55:173,24,0	1/1:14,14:28:38.50:275,38,0	0/0:9,0:8:12.01:0,12,112	0/0:22,0:22:33.04:0,33,317	0/0:18,0:19:9.90:0,10,210	0/0:12,1:13:10.25:0,10,86	0/0:15,1:15:12.13:0,12,224	0/0:12,0:12:15.01:0,15,140	0/0:13,0:13:21.15:0,21,172	0/0:20,2:22:11.10:0,11,256	0/0:36,0:35:57.04:0,57,537	0/0:31,0:29:49.55:0,50,415	0/0:23,1:23:11.11:0,11,261	0/0:11,0:11:15.02:0,15,146	0/0:9,0:8:11.96:0,12,101	0/0:5,0:5:12.02:0,12,117	0/0:13,0:13:24.04:0,24,232	0/0:12,0:12:15.41:0,15,120	0/0:25,1:25:26.08:0,26,392	0/0:23,1:24:14.06:0,14,281	0/0:15,0:13:17.99:0,18,167	0/0:13,0:13:14.94:0,15,127
chr10	92835055	.	G	GA	515.74	PASS	AB=0.929;AC=7;AF=0.125;AN=56;BaseQRankSum=4.717;DP=695;FS=0.000;HRun=11;HaplotypeScore=80.0022;InbreedingCoeff=0.8154;MQ=62.11;MQ0=23;MQRankSum=-4.282;QD=6.97;ReadPosRankSum=-2.182;VQSLOD=1.8043;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,14:28:28.34:459,28,0	0/0:18,0:18:45.69:0,46,348	0/0:56,0:17:0.24:0,0,89	0/0:61,0:14:14.77:0,15,163	0/0:25,1:27:47.54:0,48,413	1/1:4,1:19:18.32:113,18,0	1/1:10,1:13:19.20:83,19,0	0/0:23,0:22:42.10:0,42,287	0/0:23,0:22:46.98:0,47,365	0/0:40,1:42:52.67:0,53,580	0/0:21,0:22:55.61:0,56,412	0/0:21,1:22:23.30:0,23,360	0/0:20,0:20:45.57:0,46,333	0/0:13,0:13:26.86:0,27,209	0/0:29,0:30:73.69:0,74,559	0/0:31,0:30:79.43:0,79,602	0/0:25,0:25:61.54:0,62,465	0/0:15,0:14:38.82:0,39,297	0/0:28,0:28:68.71:0,69,549	0/0:23,0:23:58.78:0,59,446	0/1:12,1:13:0.57:1,0,178	0/0:18,0:18:23.33:0,23,324	0/0:20,1:21:14.25:0,14,286	0/0:17,0:16:47.82:0,48,371	0/0:18,0:18:47.80:0,48,371	0/0:21,0:23:51.85:0,52,381	0/0:33,0:33:57.85:0,58,548	0/0:9,0:9:17.90:0,18,139
chr10	92835070	.	A	AAAGG	1404.89	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=5.941;DP=707;FS=0.685;HRun=0;HaplotypeScore=117.2444;InbreedingCoeff=0.8961;MQ=59.15;MQ0=23;MQRankSum=-6.654;QD=8.84;ReadPosRankSum=-3.576;VQSLOD=1.4132;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,12:30:27.48:577,27,0	0/0:18,0:18:39.11:0,39,591	0/0:46,0:10:3.01:0,3,44	0/1:58,0:11:0:0,0,0	0/0:28,0:28:57.16:0,57,854	1/1:12,5:17:24.08:504,24,0	1/1:15,2:17:9.01:162,9,0	1/1:36,0:34:33.79:316,34,0	0/0:22,0:21:45.15:0,45,717	0/0:39,0:39:72.23:0,72,1089	0/0:20,0:20:39.12:0,39,597	0/0:27,0:27:57.17:0,57,852	0/0:21,0:21:45.15:0,45,717	0/0:18,0:18:39.12:0,39,590	0/0:29,0:29:57.16:0,57,859	0/0:29,0:28:60.17:0,60,909	0/0:22,0:22:42.12:0,42,637	0/0:17,0:16:36.05:0,36,494	0/0:32,0:31:45.06:0,45,625	0/0:25,0:25:60.18:0,60,906	0/0:12,0:12:24.05:0,24,334	0/0:18,0:18:39.12:0,39,595	0/0:18,0:18:30.10:0,30,477	0/0:20,0:19:22.07:0,22,523	0/0:21,0:21:48.13:0,48,711	0/0:24,0:24:42.10:0,42,582	0/0:28,0:28:69.23:0,69,1088	0/0:14,0:14:33.11:0,33,526
chr10	92836262	.	A	AG	629.89	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.795;DP=617;FS=11.727;HRun=7;HaplotypeScore=60.2448;InbreedingCoeff=0.9382;MQ=79.67;MQ0=0;MQRankSum=-3.454;QD=21.72;ReadPosRankSum=1.568;VQSLOD=2.5053;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:29:60.18:725,60,0	0/0:3,0:3:9.01:0,9,87	0/0:27,0:27:57.07:0,57,548	0/0:10,0:10:27.03:0,27,256	0/0:13,0:13:32.92:0,33,304	0/0:17,0:16:42.06:0,42,406	0/0:31,0:31:81.11:0,81,776	0/0:36,0:36:87.13:0,87,840	0/0:24,0:24:66.05:0,66,623	0/0:12,0:12:33.02:0,33,310	0/0:8,0:8:21.03:0,21,202	0/0:29,0:29:78.11:0,78,753	0/0:20,0:20:54.08:0,54,521	0/0:28,0:28:69.11:0,69,666	0/0:24,0:24:66.08:0,66,628	0/0:24,0:24:63.05:0,63,592	0/0:53,0:53:99:0,135,1289	0/0:29,0:29:81.13:0,81,782	0/0:26,0:27:74.13:0,74,697	0/0:17,0:17:45.07:0,45,434	0/0:34,0:34:84.10:0,84,805	0/0:15,0:15:45.07:0,45,435	0/0:16,0:16:42.07:0,42,405	0/0:28,0:28:84.14:0,84,811	0/0:13,0:13:27.03:0,27,260	0/0:26,0:26:69.10:0,69,666	0/0:15,0:15:42.07:0,42,405	0/0:9,0:9:27.04:0,27,261
chr10	92838697	.	G	GAA	2342.87	PASS	AB=0.920;AC=11;AF=0.196;AN=56;BaseQRankSum=-0.465;DP=765;FS=1.262;HRun=12;HaplotypeScore=117.8729;InbreedingCoeff=0.6813;MQ=68.35;MQ0=0;MQRankSum=-1.037;QD=11.89;ReadPosRankSum=-3.704;VQSLOD=1.6413;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,39:52:67.38:1102,67,0	0/0:14,0:14:36.02:0,36,328	0/0:10,0:10:3.53:0,4,36	0/0:7,0:8:11.60:0,12,94	0/1:26,0:33:1.14:1,0,309	1/1:1,18:21:41.62:532,42,0	1/1:12,13:27:41.02:484,41,0	1/1:12,5:19:32.57:369,33,0	0/0:25,0:32:40.71:0,41,371	0/0:21,0:23:23.18:0,23,233	0/0:15,0:16:13.13:0,13,242	0/0:26,0:30:64.61:0,65,535	0/0:32,0:35:67.66:0,68,646	0/0:27,0:27:65.95:0,66,606	0/0:41,0:44:72.78:0,73,804	0/0:29,0:30:56.61:0,57,511	0/0:37,0:39:44.62:0,45,670	0/0:30,0:33:32.58:0,33,504	0/1:18,0:19:3.64:4,0,192	0/1:24,0:26:15.13:15,0,222	0/0:37,0:42:43.41:0,43,718	0/0:25,0:27:56.81:0,57,568	0/0:18,0:20:32.58:0,33,287	0/0:30,0:37:73.57:0,74,710	0/0:23,0:29:8.98:0,9,377	0/0:26,0:30:44.38:0,44,444	0/0:23,0:27:52.94:0,53,547	0/0:12,0:14:26.42:0,26,266
chr10	92838794	.	CTGGGG	C	1946.89	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.087;DP=719;FS=1.967;HRun=0;HaplotypeScore=139.2816;InbreedingCoeff=0.9953;MQ=77.84;MQ0=0;MQRankSum=-9.718;QD=45.28;ReadPosRankSum=-0.448;VQSLOD=3.8976;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,3474	0/0:9,0:9:27.09:0,27,900	0/0:24,0:24:72.21:0,72,2225	0/0:14,0:14:40.92:0,41,1166	0/0:14,0:14:42.14:0,42,1347	1/1:2,19:21:61.38:999,61,0	1/1:2,20:22:63.20:1069,63,0	0/0:24,0:24:72.25:0,72,2338	0/0:18,0:18:54.17:0,54,1717	0/0:28,0:28:81.28:0,81,2673	0/0:20,0:20:57.02:0,57,1746	0/0:32,0:32:96.32:0,96,3108	0/0:19,0:19:54.19:0,54,1791	0/0:23,0:23:66.23:0,66,2147	0/0:28,0:28:84.29:0,84,2799	0/0:27,0:27:81.28:0,81,2623	0/0:48,0:48:99:0,144,4667	0/0:26,0:26:75.26:0,75,2490	0/0:30,0:30:90.30:0,90,2823	0/0:26,0:26:75.26:0,75,2385	0/0:68,0:68:99:0,205,6544	0/0:22,0:22:60.21:0,60,1956	0/0:19,0:19:54.19:0,54,1736	0/0:39,0:39:99:0,117,3842	0/0:27,0:27:81.28:0,81,2665	0/0:29,0:29:87.29:0,87,2769	0/0:19,0:19:57.20:0,57,1897	0/0:6,0:6:18.06:0,18,580
chr10	92838800	.	CT	C	644.52	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.672;DP=721;FS=8.677;HRun=2;HaplotypeScore=82.8104;InbreedingCoeff=0.9836;MQ=73.82;MQ0=0;MQRankSum=-9.735;QD=15.35;ReadPosRankSum=-0.099;VQSLOD=2.6197;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1643	0/0:9,0:9:27.09:0,27,405	0/0:22,0:22:66.21:0,66,956	0/0:13,0:13:31.04:0,31,492	0/0:15,0:15:42.13:0,42,611	1/1:3,19:22:54.99:373,55,0	1/1:0,20:20:56.46:393,56,0	0/0:26,0:26:78.26:0,78,1146	0/0:19,0:19:57.18:0,57,832	0/0:30,0:30:90.29:0,90,1316	0/0:20,0:20:57.06:0,57,834	0/0:29,0:29:87.29:0,87,1303	0/0:21,0:21:54.16:0,54,783	0/0:23,0:23:66.22:0,66,973	0/0:33,0:33:96.30:0,96,1398	0/0:27,0:27:81.27:0,81,1212	0/0:46,0:46:99:0,129,1876	0/0:24,0:24:69.17:0,69,988	0/0:27,0:27:75.24:0,75,1089	0/0:28,0:28:78.25:0,78,1147	0/0:72,0:72:99:0,217,3113	0/0:19,0:19:54.18:0,54,809	0/0:18,0:18:54.17:0,54,789	0/0:41,0:41:99:0,117,1704	0/0:25,0:25:75.24:0,75,1103	0/0:28,0:28:84.28:0,84,1236	0/0:20,0:20:60.19:0,60,878	0/0:4,0:4:12.04:0,12,178
chr10	92839264	.	GACACACAC	G	289.64	PASS	AB=1.000;AC=11;AF=0.262;AN=42;BaseQRankSum=2.045;DP=500;FS=9.195;HRun=0;HaplotypeScore=128.0785;InbreedingCoeff=0.5744;MQ=72.25;MQ0=8;MQRankSum=-2.237;QD=2.96;ReadPosRankSum=0.970;VQSLOD=1.5849;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:2.22:0,2,33	0/0:4,0:4:2.94:0,3,21	./.	./.	0/0:11,0:11:3.01:0,3,85	1/1:11,0:11:3:56,3,0	./.	./.	0/0:17,0:17:18.06:0,18,585	0/0:24,0:24:30.10:0,30,928	./.	1/1:9,1:13:9.01:137,9,0	1/1:24,0:24:2.84:14,3,0	./.	0/0:21,0:20:21.07:0,21,516	0/0:18,0:18:24.06:0,24,639	0/0:24,0:23:20.26:0,20,353	0/0:16,0:16:0:0,0,0	0/0:17,0:17:6.02:0,6,220	0/1:6,0:5:0:0,0,0	0/0:45,0:43:48.04:0,48,1315	0/0:14,3:17:0.47:0,0,1	./.	1/1:28,1:32:3.01:74,3,0	1/1:9,1:11:6.02:130,6,0	0/0:13,0:13:18.06:0,18,554	0/0:18,0:18:15.37:0,15,484	0/0:5,0:7:6.02:0,6,204
chr10	92840804	.	ATGG	A	1544.02	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.382;DP=594;FS=9.576;HRun=0;HaplotypeScore=107.9017;InbreedingCoeff=0.9993;MQ=83.58;MQ0=0;MQRankSum=-8.643;QD=45.41;ReadPosRankSum=0.174;VQSLOD=5.3329;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.29:0,90,2213	0/0:9,0:9:27.09:0,27,665	0/0:24,0:23:59.38:0,59,1420	0/0:20,0:20:54.19:0,54,1309	0/0:19,0:19:57.20:0,57,1400	1/1:0,13:13:39.13:645,39,0	1/1:1,9:10:30.10:480,30,0	1/1:1,10:11:33.11:562,33,0	0/0:20,0:20:60.18:0,60,1407	0/0:23,0:23:69.23:0,69,1652	0/0:20,0:20:60.21:0,60,1452	0/0:23,0:23:69.24:0,69,1698	0/0:15,0:15:45.15:0,45,1109	0/0:26,0:26:78.27:0,78,1911	0/0:22,0:22:66.23:0,66,1609	0/0:30,0:30:90.31:0,90,2185	0/0:24,0:24:72.25:0,72,1741	0/0:27,0:26:75.26:0,75,1797	0/0:21,0:21:63.21:0,63,1509	0/0:19,0:19:57.20:0,57,1392	0/0:38,0:38:99:0,114,2769	0/0:14,0:14:42.14:0,42,1035	0/0:17,0:17:51.18:0,51,1256	0/0:38,0:38:99:0,111,2672	0/0:17,0:17:51.18:0,51,1256	0/0:15,0:15:45.15:0,45,1109	0/0:29,0:28:84.28:0,84,2019	0/0:16,0:16:48.16:0,48,1141
chr10	92840809	.	TCGTGCC	T	1675.84	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.512;DP=585;FS=8.540;HRun=0;HaplotypeScore=142.6240;InbreedingCoeff=0.9990;MQ=83.06;MQ0=0;MQRankSum=-9.356;QD=52.37;ReadPosRankSum=1.178;VQSLOD=3.5496;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.32:0,96,3455	0/0:9,0:9:27.09:0,27,1016	0/0:23,0:22:60.21:0,60,2071	0/0:19,0:19:54.19:0,54,1849	0/0:18,0:18:54.17:0,54,1870	1/1:0,13:13:39.13:731,39,0	1/1:0,9:9:27.09:508,27,0	1/1:0,10:10:30.10:579,30,0	0/0:20,0:20:57.20:0,57,2098	0/0:22,0:22:66.22:0,66,2343	0/0:19,0:19:57.20:0,57,2098	0/0:19,0:19:57.17:0,57,1942	0/0:17,0:17:51.18:0,51,1859	0/0:24,0:24:72.25:0,72,2580	0/0:22,0:22:66.23:0,66,2483	0/0:29,0:29:87.30:0,87,3167	0/0:25,0:25:75.23:0,75,2712	0/0:25,0:25:69.24:0,69,2501	0/0:21,0:21:63.15:0,63,2078	0/0:18,0:18:54.17:0,54,1849	0/0:41,0:41:99:0,123,4231	0/0:15,0:15:45.14:0,45,1539	0/0:18,0:18:54.19:0,54,1922	0/0:38,0:38:99:0,114,4173	0/0:16,0:16:48.16:0,48,1807	0/0:15,0:15:45.15:0,45,1648	0/0:30,0:29:90.24:0,90,2970	0/0:14,0:14:42.14:0,42,1580
chr10	92840816	.	AGGCC	A	1228.51	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.514;DP=587;FS=10.283;HRun=0;HaplotypeScore=119.4375;InbreedingCoeff=0.9990;MQ=81.94;MQ0=0;MQRankSum=-9.417;QD=38.39;ReadPosRankSum=1.057;VQSLOD=3.8036;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.32:0,93,2678	0/0:9,0:9:27.09:0,27,758	0/0:23,0:22:66.23:0,66,1823	0/0:20,0:20:57.19:0,57,1566	0/0:16,0:16:48.16:0,48,1389	1/1:0,13:13:39.13:549,39,0	1/1:0,9:9:27.09:381,27,0	1/1:0,10:10:30.10:440,30,0	0/0:20,0:20:60.21:0,60,1720	0/0:22,0:22:66.23:0,66,1869	0/0:19,0:19:57.20:0,57,1649	0/0:20,0:20:60.21:0,60,1724	0/0:16,0:16:48.16:0,48,1390	0/0:23,0:23:69.24:0,69,1986	0/0:23,0:23:69.24:0,69,2000	0/0:28,0:28:84.27:0,84,2372	0/0:28,0:28:84.29:0,84,2327	0/0:25,0:25:66.23:0,66,1881	0/0:17,0:17:51.18:0,51,1478	0/0:17,0:17:51.18:0,51,1441	0/0:41,0:41:99:0,123,3476	0/0:13,0:13:39.13:0,39,1094	0/0:19,0:19:57.20:0,57,1631	0/0:39,0:39:99:0,117,3382	0/0:19,0:19:57.20:0,57,1649	0/0:18,0:18:54.19:0,54,1569	0/0:31,0:31:90.29:0,90,2464	0/0:15,0:15:45.15:0,45,1304
chr10	92841791	.	T	TACACACACACACACAC	8580.96	PASS	AB=1.000;AC=45;AF=0.865;AN=52;BaseQRankSum=0.103;DP=606;FS=12.676;HRun=0;HaplotypeScore=248.7082;InbreedingCoeff=0.6055;MQ=59.72;MQ0=11;MQRankSum=-4.891;QD=18.10;ReadPosRankSum=-2.853;VQSLOD=1.9903;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:27:0.09:1,0,0	0/0:8,0:8:6.02:0,6,201	./.	./.	1/1:19,0:19:9.46:116,9,0	1/1:25,0:24:12:226,12,0	1/1:24,0:24:17.03:480,17,0	1/1:35,0:35:53.39:1178,53,0	1/1:17,0:17:6.49:192,6,0	1/1:21,0:20:38.92:1035,39,0	1/1:15,0:15:9.03:294,9,0	1/1:17,5:21:3.01:226,3,0	1/1:19,0:18:19.31:642,19,0	1/1:19,0:17:6.02:162,6,0	0/0:21,0:23:39.05:0,39,1383	1/1:11,0:10:8.98:122,9,0	0/0:26,0:26:35.20:0,35,1030	1/1:24,0:23:32.54:490,33,0	1/1:24,0:23:23.46:542,23,0	1/1:17,0:15:9.01:129,9,0	1/1:18,0:18:0.47:2,0,0	1/1:24,0:23:6.49:231,6,0	1/1:19,0:18:4.19:27,4,0	1/1:18,0:17:5.99:86,6,0	1/1:20,0:18:5.93:177,6,0	1/1:21,0:21:26.89:860,27,0	1/1:25,0:24:30.05:1012,30,0	1/1:6,0:6:9.03:350,9,0
chr10	92844550	.	GA	G	346.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.220;DP=379;FS=0.000;HRun=10;HaplotypeScore=38.1128;InbreedingCoeff=0.6687;MQ=64.61;MQ0=4;MQRankSum=-1.090;QD=11.18;ReadPosRankSum=1.204;VQSLOD=1.8493;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,25:28:50.98:441,51,0	0/0:5,0:5:15.04:0,15,166	0/0:10,0:6:13.72:0,14,122	0/0:12,0:9:8.68:0,9,102	0/0:11,0:10:21.06:0,21,232	0/0:9,0:9:24.05:0,24,256	0/0:4,0:4:12.03:0,12,133	0/0:38,0:37:84.67:0,85,917	0/0:7,0:7:21.04:0,21,222	0/0:10,0:10:30.08:0,30,332	0/0:13,0:14:32.92:0,33,346	0/0:10,0:10:4:0,4,254	0/0:10,0:10:27.02:0,27,285	0/0:12,0:12:33.09:0,33,365	0/0:11,0:11:33.09:0,33,365	0/0:8,0:8:24.06:0,24,266	0/0:31,0:31:87.24:0,87,962	0/0:18,0:18:47.30:0,47,490	0/0:18,0:18:42.08:0,42,452	0/0:13,0:11:30.07:0,30,323	0/0:7,0:7:21.06:0,21,232	0/0:4,0:4:12.03:0,12,133	0/0:12,0:12:27.07:0,27,299	0/0:11,1:12:4.03:0,4,273	0/0:18,0:18:51.14:0,51,564	0/0:14,0:14:36.10:0,36,398	0/0:18,0:17:51.14:0,51,561	0/0:12,0:12:36.10:0,36,398
chr10	92845458	.	CCT	C	3592.37	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.209;DP=649;FS=6.190;HRun=0;HaplotypeScore=79.8451;InbreedingCoeff=0.9993;MQ=59.78;MQ0=1;MQRankSum=-2.866;QD=34.54;ReadPosRankSum=0.420;VQSLOD=5.3676;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:38:99:1386,99,0	0/0:13,0:13:33.11:0,33,580	0/0:30,0:25:66.23:0,66,1172	0/0:18,0:16:42.14:0,42,738	0/0:28,0:28:78.25:0,78,1360	1/1:1,19:19:45.15:629,45,0	1/1:0,12:12:33.11:462,33,0	1/1:6,27:33:81.26:1115,81,0	0/0:17,0:17:48.16:0,48,865	0/0:18,0:18:54.18:0,54,945	0/0:21,0:21:57.20:0,57,1027	0/0:26,0:26:72.25:0,72,1297	0/0:15,0:15:42.14:0,42,756	0/0:25,0:25:63.22:0,63,1118	0/0:18,0:18:54.17:0,54,944	0/0:25,0:25:75.24:0,75,1321	0/0:18,0:18:54.18:0,54,961	0/0:22,0:23:24.56:0,25,1058	0/0:20,0:20:60.21:0,60,1057	0/0:23,0:23:57.20:0,57,1003	0/0:21,0:21:60.21:0,60,1056	0/0:29,0:29:78.27:0,78,1405	0/0:21,0:21:57.20:0,57,1026	0/0:28,0:28:81.28:0,81,1458	0/0:21,0:21:60.21:0,60,1070	0/0:35,0:35:99:0,102,1824	0/0:33,0:33:90.29:0,90,1591	0/0:19,0:19:36.12:0,36,648
chr10	92845535	.	TA	T	715.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.305;DP=567;FS=3.232;HRun=9;HaplotypeScore=55.8236;InbreedingCoeff=0.9599;MQ=76.33;MQ0=0;MQRankSum=0.370;QD=21.05;ReadPosRankSum=1.716;VQSLOD=4.5177;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:34:61.42:811,61,0	0/0:8,0:8:21.06:0,21,242	0/0:12,0:12:19.26:0,19,247	0/0:17,0:16:22.27:0,22,223	0/0:29,0:29:73.46:0,73,833	0/0:19,0:19:57.17:0,57,658	0/0:20,0:20:57.17:0,57,658	0/0:31,0:31:69.21:0,69,796	0/0:11,0:11:30.09:0,30,341	0/0:33,0:33:87.26:0,87,1004	0/0:25,0:23:69.21:0,69,796	0/0:12,0:12:30.09:0,30,346	0/0:8,0:8:18.05:0,18,208	0/0:23,0:23:63.17:0,63,716	0/0:11,0:11:24.07:0,24,277	0/0:14,0:14:36.11:0,36,415	0/0:18,0:18:48.14:0,48,553	0/0:23,0:23:38.73:0,39,688	0/0:20,0:20:60.15:0,60,673	0/0:33,0:33:81.24:0,81,934	0/0:14,0:14:42.12:0,42,484	0/0:16,0:16:42.12:0,42,485	0/0:17,1:17:14.66:0,15,423	0/0:19,0:19:48.14:0,48,554	0/0:25,0:25:66.20:0,66,762	0/0:29,0:29:78.23:0,78,900	0/0:24,0:24:60.17:0,60,683	0/0:21,0:21:63.16:0,63,706
chr10	92845846	.	TAC	T	1093.59	PASS	AB=0.970;AC=31;AF=0.620;AN=50;BaseQRankSum=1.873;DP=454;FS=8.653;HRun=0;HaplotypeScore=90.9044;InbreedingCoeff=0.2535;MQ=71.61;MQ0=15;MQRankSum=1.322;QD=4.19;ReadPosRankSum=5.173;VQSLOD=1.2963;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:24.87:0,25,236	0/0:7,0:7:6.01:0,6,70	./.	./.	1/1:7,0:7:3.45:22,3,0	0/0:19,0:19:12.34:0,12,87	0/0:26,0:26:22.96:0,23,173	0/0:32,0:31:27.93:0,28,177	1/1:8,0:8:7.49:45,7,0	0/1:12,0:11:3.11:53,0,3	1/1:9,1:10:6.99:70,7,0	0/1:15,2:17:21.09:76,0,21	1/1:7,1:9:11.75:75,12,0	1/1:14,0:14:8.94:66,9,0	0/1:21,0:21:39.59:40,0,157	1/1:5,0:8:8.52:42,9,0	0/1:20,0:20:34.46:34,0,218	0/1:9,0:8:11:11,0,51	1/1:9,1:8:8.86:61,9,0	1/1:17,0:17:19.62:131,20,0	1/1:30,3:32:12.67:184,13,0	./.	0/0:8,0:10:2.78:0,3,19	1/1:9,1:10:11.53:84,12,0	1/1:15,2:17:1.41:85,1,0	0/1:13,0:13:11.03:131,0,11	0/1:15,1:14:30.82:31,0,44	1/1:3,0:7:5.32:22,5,0
chr10	92845883	.	A	ACTCTCTCTCT	4743.71	PASS	AB=1.000;AC=32;AF=0.593;AN=54;BaseQRankSum=1.545;DP=548;FS=0.636;HRun=0;HaplotypeScore=193.6157;InbreedingCoeff=0.3817;MQ=51.58;MQ0=27;MQRankSum=-0.136;QD=12.48;ReadPosRankSum=-2.263;VQSLOD=3.3146;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:12.04:0,12,327	0/0:15,0:15:32.59:0,33,845	./.	0/0:10,0:6:2.72:0,3,20	0/1:17,0:17:85.41:138,0,85	0/0:17,0:16:5.19:0,5,124	1/1:19,0:19:0.92:2,1,0	0/0:20,0:18:2.50:0,2,9	1/1:20,0:18:23.42:377,23,0	0/1:17,0:15:13.41:213,0,13	0/1:14,0:14:14.63:128,0,15	1/1:24,0:24:33.24:889,33,0	1/1:11,0:10:7.70:143,8,0	1/1:11,14:26:5.08:22,5,0	0/0:26,0:26:36.11:0,36,951	0/0:20,0:20:24.34:0,24,159	0/0:30,0:29:31.24:0,31,786	1/1:11,0:10:17.67:336,18,0	1/1:33,0:28:6.04:224,6,0	0/1:19,0:19:6.81:189,0,7	0/1:41,0:38:35.78:217,0,36	1/1:11,0:11:9.03:216,9,0	1/1:9,0:7:5.35:128,5,0	1/1:17,0:15:17.16:458,17,0	1/1:26,0:26:11.95:265,12,0	1/1:28,0:26:23.05:375,23,0	0/1:21,0:18:69.98:249,0,70	1/1:15,0:13:15:177,15,0
chr10	92845908	.	CTCTCTA	C	639.86	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-0.474;DP=502;FS=0.000;HRun=0;HaplotypeScore=143.8041;InbreedingCoeff=0.8967;MQ=63.36;MQ0=9;MQRankSum=-0.476;QD=15.61;ReadPosRankSum=-3.104;VQSLOD=2.3562;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:63.54:0,64,819	0/0:12,0:12:33.11:0,33,1066	0/0:11,0:6:8.33:0,8,142	0/0:17,0:10:26.51:0,27,253	0/0:23,0:23:57.08:0,57,1263	1/1:13,0:13:15.47:306,15,0	1/1:11,0:11:3.01:39,3,0	1/1:1,16:16:47.78:425,48,0	0/0:19,0:18:38.89:0,39,1183	0/0:19,0:19:56.77:0,57,1410	0/0:17,0:17:42:0,42,870	0/0:18,0:18:42.11:0,42,1091	0/0:11,0:10:27.03:0,27,424	0/0:27,0:26:22.59:0,23,266	0/0:24,0:24:66.12:0,66,1455	0/0:19,0:19:32.84:0,33,936	0/0:31,0:30:76.04:0,76,1689	0/0:8,0:8:21.06:0,21,553	0/0:22,0:21:63.09:0,63,1320	0/0:18,0:18:40.82:0,41,964	0/0:22,0:21:48.14:0,48,1506	0/0:13,0:13:24.02:0,24,494	0/0:11,0:10:17.70:0,18,284	0/0:14,0:13:24.07:0,24,680	0/0:22,0:22:24.04:0,24,499	0/0:27,0:27:81.23:0,81,1962	0/0:18,0:17:42.52:0,43,1210	0/0:10,0:10:27.06:0,27,650
chr10	92845910	.	CTCTA	C	564.82	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=0.114;DP=500;FS=0.831;HRun=0;HaplotypeScore=127.2290;InbreedingCoeff=0.9200;MQ=67.47;MQ0=8;MQRankSum=-0.125;QD=13.78;ReadPosRankSum=-3.182;VQSLOD=2.8277;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:58.14:0,58,470	0/0:12,0:12:33.11:0,33,772	0/0:14,0:9:19.86:0,20,222	0/0:18,0:11:29.31:0,29,285	0/0:23,0:23:57.08:0,57,979	1/1:13,0:13:17.95:272,18,0	1/1:1,10:11:2.96:19,3,0	1/1:17,0:16:47.78:404,48,0	0/0:19,0:18:38.88:0,39,868	0/0:17,0:17:51.12:0,51,1002	0/0:17,0:17:40.84:0,41,643	0/0:16,0:16:36.10:0,36,776	0/0:12,0:11:29.91:0,30,344	0/0:24,0:23:17.49:0,17,170	0/0:25,0:25:68.94:0,69,1085	0/0:19,0:19:32.19:0,32,649	0/0:30,0:29:69.51:0,70,1176	0/0:8,0:8:21.06:0,21,380	0/0:21,0:20:60.06:0,60,972	0/0:18,0:18:42.95:0,43,742	0/0:21,0:21:50.96:0,51,1122	0/0:14,0:14:27.02:0,27,419	0/0:12,0:11:20.44:0,20,234	0/0:14,0:13:24.07:0,24,507	0/0:22,0:22:24.03:0,24,372	0/0:28,0:28:84.16:0,84,1477	0/0:18,0:17:42.04:0,42,919	0/0:10,0:10:27.04:0,27,481
chr10	92846813	.	A	AGAG	732.44	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=7.699;DP=448;FS=3.661;HRun=0;HaplotypeScore=77.4752;InbreedingCoeff=0.3944;MQ=75.48;MQ0=8;MQRankSum=-7.812;QD=11.44;ReadPosRankSum=-3.268;VQSLOD=2.3301;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,16:26:26.79:824,27,0	0/0:4,0:4:12.04:0,12,175	0/0:30,0:19:1.65:0,2,270	0/0:32,0:22:32.92:0,33,437	0/0:6,0:6:15.05:0,15,217	0/1:12,0:12:6.46:6,0,137	0/1:26,0:26:5.40:5,0,364	0/0:21,0:21:16.67:0,17,276	0/0:14,0:14:36.10:0,36,487	0/0:13,0:13:33.10:0,33,464	0/0:14,0:14:30.08:0,30,400	0/0:21,0:21:42.12:0,42,575	0/0:16,0:16:48.01:0,48,650	0/0:18,0:18:33.11:0,33,480	0/0:19,0:19:39.12:0,39,549	0/0:12,0:12:30.08:0,30,402	0/0:18,0:18:45.15:0,45,652	0/0:11,0:11:30.08:0,30,417	0/0:9,0:9:15.02:0,15,165	0/0:12,0:12:18.06:0,18,261	0/0:25,0:25:48.16:0,48,695	0/0:18,0:18:39.13:0,39,566	0/0:8,0:8:21.06:0,21,287	0/0:17,0:17:42.08:0,42,551	0/0:10,0:10:24.06:0,24,320	0/0:13,0:13:27.08:0,27,375	0/0:22,0:22:42.11:0,42,572	0/0:1,0:1:3.01:0,3,44
chr10	92846834	.	G	GGAA	3217.38	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.847;DP=447;FS=2.347;HRun=0;HaplotypeScore=74.7834;InbreedingCoeff=0.9206;MQ=67.26;MQ0=11;MQRankSum=-9.613;QD=36.98;ReadPosRankSum=-1.156;VQSLOD=4.0424;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,16:24:51.69:781,52,0	0/0:7,0:7:9.03:0,9,139	0/0:39,0:19:2.23:0,2,346	0/0:40,0:22:25.70:0,26,315	0/0:8,0:8:21.06:0,21,297	1/1:4,6:10:27.09:548,27,0	1/1:15,12:27:57.19:1096,57,0	1/1:13,12:26:54.13:951,54,0	0/0:17,0:16:45.15:0,45,677	0/0:13,0:13:33.11:0,33,506	0/0:8,0:8:18.05:0,18,257	0/0:13,0:13:36.12:0,36,555	0/0:22,0:22:54.15:0,54,781	0/0:16,0:16:42.13:0,42,624	0/0:13,0:13:30.07:0,30,411	0/0:11,0:11:33.10:0,33,486	0/0:15,0:15:31.66:0,32,445	0/0:12,0:12:30.07:0,30,419	0/0:12,0:12:33.06:0,33,437	0/0:5,0:5:15.05:0,15,232	0/0:22,0:22:51.09:0,51,759	0/0:19,0:19:45.11:0,45,632	0/0:7,0:7:21.07:0,21,313	0/0:13,0:12:30.06:0,30,398	0/0:14,0:14:35.96:0,36,482	0/0:10,0:10:24.06:0,24,347	0/0:18,0:18:48.15:0,48,718	0/0:6,0:6:18.06:0,18,271
chr10	92846851	.	AG	A	1138.17	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.868;DP=443;FS=0.617;HRun=5;HaplotypeScore=62.9796;InbreedingCoeff=0.9628;MQ=71.60;MQ0=5;MQRankSum=-4.609;QD=19.29;ReadPosRankSum=0.635;VQSLOD=3.0597;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:33.02:0,33,385	0/0:5,0:5:15.05:0,15,205	0/0:30,0:20:31.06:0,31,495	0/0:34,0:18:10.44:0,10,191	0/0:11,0:11:30.07:0,30,369	1/1:1,9:10:24.07:272,24,0	1/1:3,19:22:45.12:504,45,0	1/1:11,16:26:45.12:505,45,0	0/0:19,0:18:42.11:0,42,527	0/0:10,0:10:21.06:0,21,263	0/0:7,0:7:21.05:0,21,255	0/0:21,0:21:57.10:0,57,639	0/0:22,0:22:66.16:0,66,824	0/0:19,0:19:48.10:0,48,579	0/0:20,0:20:54.13:0,54,653	0/0:13,0:13:36.09:0,36,448	0/0:10,0:10:27.08:0,27,353	0/0:12,0:12:36.08:0,36,442	0/0:13,0:13:37.01:0,37,494	0/0:9,0:9:14.81:0,15,189	0/0:22,0:22:60.15:0,60,780	0/0:16,0:16:45.14:0,45,590	0/0:10,0:10:24:0,24,287	0/0:19,0:18:54.13:0,54,675	0/0:12,0:12:33.07:0,33,401	0/0:7,0:7:18.06:0,18,245	0/0:13,0:13:36.10:0,36,461	0/0:7,0:7:18.06:0,18,246
chr10	92848524	.	A	AAAGGAAGGAAGG	9136.10	PASS	AC=26;AF=0.500;AN=52;BaseQRankSum=6.977;DP=813;FS=18.230;HRun=0;HaplotypeScore=265.2853;InbreedingCoeff=0.9413;MQ=55.65;MQ0=3;MQRankSum=-9.250;QD=25.31;ReadPosRankSum=-5.688;VQSLOD=1.8954;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:55:72.25:0,72,1977	0/0:12,0:12:27.09:0,27,814	./.	./.	1/1:12,0:27:29.97:570,30,0	1/1:11,0:21:27.09:637,27,0	1/1:34,0:34:33.10:708,33,0	0/0:23,0:22:9.01:0,9,107	1/1:19,0:33:36.12:887,36,0	1/1:23,0:40:57.19:1271,57,0	1/1:14,0:24:33.11:661,33,0	0/0:41,0:41:72.21:0,72,1965	0/0:36,0:36:57.18:0,57,1767	0/0:29,0:29:36.12:0,36,1177	0/0:37,0:37:57.19:0,57,1670	1/1:23,0:44:63.22:1560,63,0	0/0:37,0:37:66.17:0,66,1903	0/0:26,0:27:42.14:0,42,1331	1/1:18,0:17:8.96:263,9,0	1/1:17,6:23:12.04:678,12,0	1/1:14,8:27:3.01:174,3,0	0/0:26,0:26:51.16:0,51,1499	0/0:26,0:26:39.13:0,39,1236	0/0:48,0:48:78.85:0,79,2414	0/0:30,0:30:51.18:0,51,1538	1/1:19,0:33:38.20:921,38,0	1/1:12,8:23:10.59:526,11,0	1/1:8,0:14:12.04:280,12,0
chr10	92848753	.	TACAC	T	796.89	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.601;DP=883;FS=18.277;HRun=0;HaplotypeScore=144.5721;InbreedingCoeff=1.0000;MQ=61.31;MQ0=3;MQRankSum=-3.346;QD=28.46;ReadPosRankSum=-3.380;VQSLOD=1.7172;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,108,2606	0/0:16,0:16:48.16:0,48,1187	0/0:36,0:25:44.66:0,45,892	0/0:41,0:31:57.19:0,57,1350	0/0:26,0:26:66.21:0,66,1616	0/0:31,0:31:81.25:0,81,1937	0/0:38,0:38:99:0,99,2461	1/1:8,20:28:54.17:892,54,0	0/0:27,0:27:75.26:0,75,1797	0/0:37,0:37:96.33:0,96,2417	0/0:34,0:35:93.09:0,93,2180	0/0:32,0:34:90.10:0,90,2165	0/0:25,0:26:75.05:0,75,1807	0/0:30,0:30:84.29:0,84,2120	0/0:36,0:36:93.29:0,93,2259	0/0:45,0:47:99:0,108,2595	0/0:21,0:22:63:0,63,1488	0/0:20,0:20:48.08:0,48,1043	0/0:24,0:26:56.97:0,57,1252	0/0:23,0:25:71.81:0,72,1623	0/0:59,0:59:99:0,151,3782	0/0:33,0:34:93.11:0,93,2293	0/0:25,0:25:66.21:0,66,1603	0/0:38,0:38:99:0,105,2592	0/0:28,0:29:84.08:0,84,2066	0/0:29,0:30:78.05:0,78,1816	0/0:25,0:25:63.22:0,63,1560	0/0:19,0:19:49.05:0,49,1209
chr10	92849400	.	GTT	G	1508.63	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.751;DP=512;FS=6.154;HRun=11;HaplotypeScore=64.9422;InbreedingCoeff=0.9867;MQ=74.04;MQ0=0;MQRankSum=1.183;QD=23.57;ReadPosRankSum=0.014;VQSLOD=3.0875;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:13:33.40:0,33,158	0/0:6,0:6:12.04:0,12,185	0/0:20,0:20:31.08:0,31,297	0/0:9,0:7:21.07:0,21,286	0/0:22,1:23:28.27:0,28,843	1/1:5,15:20:45.09:479,45,0	1/1:2,16:18:45.10:479,45,0	1/1:4,22:26:66.14:694,66,0	0/0:20,0:21:57.15:0,57,799	0/0:22,0:22:60.20:0,60,923	0/0:23,0:24:66.22:0,66,996	0/0:19,0:19:54.17:0,54,810	0/0:24,0:25:62.68:0,63,894	0/0:13,0:13:36.10:0,36,518	0/0:22,0:22:54.17:0,54,806	0/0:12,0:13:38.62:0,39,562	0/0:15,0:15:33.07:0,33,480	0/0:17,0:18:50.64:0,51,725	0/0:15,0:15:45.14:0,45,660	0/0:22,0:23:62.70:0,63,932	0/0:14,0:14:36.07:0,36,470	0/0:13,0:13:33.06:0,33,458	0/0:19,0:19:45.15:0,45,692	0/0:14,0:14:32.89:0,33,429	0/0:28,0:28:69.22:0,69,1022	0/0:21,0:22:57.18:0,57,838	0/0:14,0:14:36.12:0,36,551	0/0:21,0:21:63.21:0,63,968
chr10	92851533	.	AGT	A	607.33	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.559;DP=603;FS=0.000;HRun=0;HaplotypeScore=97.0483;InbreedingCoeff=0.8703;MQ=76.71;MQ0=5;MQRankSum=4.206;QD=25.31;ReadPosRankSum=-3.379;VQSLOD=3.5641;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:57.65:0,58,909	0/0:5,0:5:6.02:0,6,96	0/0:37,0:26:51:0,51,769	0/0:44,1:35:46.37:0,46,766	0/0:23,0:23:56.82:0,57,910	0/0:15,0:15:15:0,15,183	0/0:17,0:17:21.07:0,21,315	1/1:5,19:24:57.17:702,57,0	0/0:21,0:21:54.17:0,54,850	0/0:23,0:23:63.17:0,63,990	0/0:14,0:14:36.12:0,36,577	0/0:22,0:22:36.10:0,36,564	0/0:20,1:21:16.04:0,16,680	0/0:17,0:17:38.16:0,38,581	0/0:24,0:23:45.09:0,45,670	0/0:24,0:23:42.13:0,42,668	0/0:18,0:18:41.35:0,41,617	0/0:12,0:12:33.11:0,33,508	0/0:18,0:18:36.08:0,36,532	0/0:25,0:25:54.15:0,54,878	0/0:43,1:44:67.48:0,67,1611	0/0:20,0:20:43.85:0,44,689	0/0:9,0:9:24.08:0,24,390	0/0:27,0:27:35.61:0,36,530	0/0:20,0:20:38.85:0,39,582	0/0:24,0:24:54.02:0,54,806	0/0:17,0:17:39.13:0,39,639	0/0:8,0:8:18.06:0,18,292
chr10	92851568	.	A	ATGTGTGTG	460.11	PASS	AB=0.731;AC=14;AF=0.280;AN=50;BaseQRankSum=-1.402;DP=609;FS=7.440;HRun=0;HaplotypeScore=149.8546;InbreedingCoeff=0.4682;MQ=50.80;MQ0=41;MQRankSum=-3.960;QD=2.71;ReadPosRankSum=-0.919;VQSLOD=2.0275;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,1:26:9.01:139,9,0	0/0:10,0:8:21.06:0,21,448	./.	./.	0/0:22,0:20:6.02:0,6,114	0/0:17,0:16:3.01:0,3,48	0/0:19,0:16:1.25:0,1,3	1/1:28,0:22:14.41:119,14,0	0/0:14,0:19:8.81:0,9,106	0/0:22,0:30:4.11:0,4,216	0/0:17,0:24:8.92:0,9,150	./.	1/1:8,0:16:9.01:117,9,0	0/1:11,0:19:9.79:58,0,10	0/0:23,0:21:21.01:0,21,429	0/0:17,0:22:5.91:0,6,83	0/0:24,0:20:19.85:0,20,355	1/1:5,0:9:3.01:64,3,0	0/0:21,0:15:2.90:0,3,16	0/0:17,0:27:12.19:0,12,123	0/0:29,0:38:14.62:0,15,119	0/0:15,0:21:2.69:0,3,7	1/1:10,1:20:3.01:65,3,0	1/1:22,3:26:3.01:38,3,0	0/0:13,0:25:5.91:0,6,27	0/1:15,0:20:7.29:7,0,200	0/0:15,0:20:5.48:0,5,31	0/0:5,0:12:11.72:0,12,117
chr10	92852224	.	GC	G	1875.92	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.421;DP=851;FS=2.589;HRun=1;HaplotypeScore=82.5943;InbreedingCoeff=0.9954;MQ=78.21;MQ0=0;MQRankSum=-5.124;QD=37.52;ReadPosRankSum=1.817;VQSLOD=4.2627;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,50:50:99:1971,141,0	0/0:7,0:7:21.07:0,21,336	0/0:15,0:15:41.96:0,42,537	0/0:22,0:22:55.72:0,56,757	0/0:23,0:23:66.22:0,66,1047	0/0:22,0:22:66.19:0,66,1004	0/0:21,0:21:63.20:0,63,981	0/0:30,0:30:87.27:0,87,1326	0/0:45,0:45:99:0,132,2059	0/0:32,0:32:93.32:0,93,1487	0/0:11,0:11:33.11:0,33,527	0/0:41,0:41:99:0,123,1910	0/0:36,0:36:99:0,108,1724	0/0:40,0:40:99:0,120,1907	0/0:51,0:51:99:0,150,2344	0/0:44,0:44:99:0,132,2083	0/0:39,0:39:99:0,114,1796	0/0:19,0:19:57.19:0,57,911	0/0:16,0:16:48.16:0,48,760	0/0:38,0:38:99:0,114,1777	0/0:66,0:66:99:0,199,3069	0/0:22,0:22:63.20:0,63,984	0/0:13,0:13:39.11:0,39,577	0/0:44,0:44:99:0,132,2087	0/0:32,0:32:96.33:0,96,1527	0/0:31,0:31:93.32:0,93,1487	0/0:30,0:30:90.29:0,90,1414	0/0:11,0:11:33.11:0,33,527
chr10	92853742	.	GAC	G	1420.37	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.871;DP=634;FS=1.467;HRun=0;HaplotypeScore=78.6634;InbreedingCoeff=0.9828;MQ=81.65;MQ0=0;MQRankSum=-4.833;QD=37.38;ReadPosRankSum=0.438;VQSLOD=5.7379;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,37:38:99:1515,99,0	0/0:5,0:5:15.05:0,15,278	0/0:14,0:14:39.12:0,39,700	0/0:26,0:26:72.05:0,72,1216	0/0:14,0:14:39.13:0,39,745	0/0:23,0:23:63:0,63,1213	0/0:36,0:36:99:0,105,2001	0/0:20,0:20:60.21:0,60,1158	0/0:21,0:21:63.22:0,63,1206	0/0:30,0:30:84.20:0,84,1610	0/0:11,0:11:33.10:0,33,604	0/0:21,0:21:63.22:0,63,1216	0/0:21,0:21:63.22:0,63,1200	0/0:28,0:28:81.28:0,81,1554	0/0:32,0:32:96.33:0,96,1852	0/0:29,0:29:87.30:0,87,1680	0/0:28,0:28:84.29:0,84,1622	0/0:26,0:26:78.27:0,78,1507	0/0:23,0:23:66.23:0,66,1261	0/0:11,0:11:33.11:0,33,637	0/0:53,0:53:99:0,160,2986	0/0:14,0:14:42.14:0,42,780	0/0:14,0:14:42.13:0,42,776	0/0:19,0:19:57.20:0,57,1101	0/0:26,0:26:78.27:0,78,1489	0/0:16,0:16:48.16:0,48,928	0/0:26,0:26:72.25:0,72,1366	0/0:9,0:9:27.09:0,27,521
chr10	92854486	.	GCTC	G	1377.63	PASS	AB=0.967;AC=9;AF=0.161;AN=56;BaseQRankSum=6.514;DP=694;FS=0.000;HRun=0;HaplotypeScore=162.7735;InbreedingCoeff=-0.1978;MQ=86.63;MQ0=0;MQRankSum=-7.585;QD=6.35;ReadPosRankSum=-6.134;VQSLOD=0.4166;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:36:99:114,0,1041	0/0:7,0:7:21.07:0,21,497	0/0:26,0:26:75.26:0,75,1743	0/0:31,0:31:70.05:0,70,1889	0/0:24,0:24:72.25:0,72,1651	0/1:24,0:24:85.35:85,0,1098	0/1:14,0:14:20.87:21,0,773	0/1:28,20:48:99:912,0,1693	0/0:27,0:27:81.28:0,81,1915	0/0:36,0:36:99:0,108,2469	0/0:18,0:18:54.19:0,54,1272	0/0:29,0:29:78.25:0,78,1328	0/0:21,0:21:4.95:0,5,907	0/1:19,0:19:99:106,0,708	0/0:32,0:32:90.31:0,90,2093	0/0:24,0:24:72.24:0,72,1657	0/0:31,0:31:93.32:0,93,2199	0/1:11,0:11:75.64:76,0,359	0/0:35,0:35:99:0,105,2385	0/0:28,0:28:84.29:0,84,1986	0/0:45,0:45:99:0,135,3189	0/1:30,0:30:99:124,0,1454	0/0:9,0:9:23.29:0,23,403	0/1:17,0:17:28.76:29,0,406	0/1:18,0:18:51.54:52,0,824	0/0:26,0:26:78.27:0,78,1842	0/0:17,0:17:51.18:0,51,1205	0/0:11,0:11:33.11:0,33,761
chr10	92854489	.	C	CCCTTTTGATAG	18527.74	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-3.729;DP=774;FS=7.049;HRun=0;HaplotypeScore=215.9588;InbreedingCoeff=0.9940;MQ=82.95;MQ0=0;MQRankSum=-16.588;QD=52.64;ReadPosRankSum=-1.634;VQSLOD=3.5945;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,20:40:57.20:2756,57,0	0/0:7,0:7:21.07:0,21,561	0/0:26,0:26:57.17:0,57,1503	0/0:31,0:31:48.16:0,48,1347	0/0:23,0:23:66.23:0,66,2095	1/1:11,14:32:42.14:2275,42,0	1/1:13,4:26:15.05:599,15,0	1/1:47,0:47:63.22:1106,63,0	0/0:27,0:27:75.26:0,75,2423	0/0:35,0:35:78.27:0,78,2532	0/0:18,0:18:42.08:0,42,1303	1/1:12,16:36:45.15:2491,45,0	1/1:7,12:24:30.10:1539,30,0	1/1:8,12:22:30.10:1662,30,0	0/0:31,0:31:75.24:0,75,2270	0/0:24,0:24:63.22:0,63,2062	0/0:33,0:33:96.30:0,96,2765	1/1:5,7:18:24.08:1120,24,0	0/0:33,0:33:90.30:0,90,2534	0/0:31,0:31:84.27:0,84,2424	0/0:47,0:47:99:0,105,3405	1/1:10,18:38:54.19:2106,54,0	1/1:2,9:18:21.07:736,21,0	1/1:7,12:25:15.21:460,15,0	1/1:7,12:26:33.11:1678,33,0	0/0:27,0:27:78.27:0,78,2400	0/0:17,0:17:39.13:0,39,1236	0/0:12,0:12:33.11:0,33,1108
chr10	92855067	.	TTTTTTTCTTC	T	847.62	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.726;DP=600;FS=0.000;HRun=0;HaplotypeScore=171.2276;InbreedingCoeff=0.9511;MQ=65.17;MQ0=7;MQRankSum=-2.322;QD=24.22;ReadPosRankSum=-4.230;VQSLOD=1.5687;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:99:0,99,4223	0/0:7,0:7:21.06:0,21,912	0/0:8,0:6:12.03:0,12,402	0/0:19,0:18:32.24:0,32,1183	0/0:31,0:31:87.20:0,87,3499	0/0:20,0:19:48.06:0,48,1899	0/0:23,0:23:51.17:0,51,2261	1/1:8,27:33:68.46:942,68,0	0/0:20,0:19:54.64:0,55,2394	0/0:27,0:27:69.10:0,69,2856	0/0:19,0:18:45.13:0,45,1885	0/0:22,0:22:63.22:0,63,3071	0/0:20,0:20:48.13:0,48,2064	0/0:24,0:24:69.22:0,69,2985	0/0:25,0:25:66.19:0,66,2892	0/0:14,0:13:32.79:0,33,1531	0/0:32,0:31:90.23:0,90,3960	0/0:16,0:16:45.15:0,45,2087	0/0:16,0:16:42.12:0,42,1710	0/0:33,0:33:87.26:0,87,3642	0/0:6,0:6:15.05:0,15,746	0/0:24,0:23:60.21:0,60,2703	0/0:13,0:13:36.10:0,36,1461	0/0:18,0:18:45.15:0,45,2043	0/0:29,0:29:69.24:0,69,3289	0/0:17,0:16:36.12:0,36,1736	0/0:18,0:18:45.12:0,45,1916	0/0:25,0:25:75.24:0,75,3158
chr10	92859185	.	T	TGAA	7866.30	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=1.562;DP=510;FS=4.095;HRun=0;HaplotypeScore=96.8438;InbreedingCoeff=0.9964;MQ=74.93;MQ0=2;MQRankSum=-5.843;QD=52.09;ReadPosRankSum=1.619;VQSLOD=7.3401;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:75.17:0,75,1167	0/0:10,0:10:30.09:0,30,466	0/0:19,0:17:35.02:0,35,601	0/0:30,0:22:26.13:0,26,620	0/0:15,0:15:42.12:0,42,638	1/1:2,19:21:54.19:1205,54,0	1/1:4,14:18:39.10:785,39,0	0/0:41,0:40:99:0,105,1651	0/0:14,0:14:39.13:0,39,623	0/0:21,0:21:57.19:0,57,927	0/0:15,0:15:39.13:0,39,637	1/1:2,13:16:42.11:880,42,0	1/1:1,17:19:51.14:1055,51,0	1/1:0,12:12:30.10:668,30,0	0/0:21,0:21:60.19:0,60,956	0/0:20,0:20:54.18:0,54,878	0/0:15,0:15:39.13:0,39,637	1/1:0,6:6:18.06:401,18,0	0/0:20,0:20:51.17:0,51,824	0/0:16,0:16:42.14:0,42,681	0/0:16,0:16:42.14:0,42,683	1/1:2,13:15:42.14:901,42,0	1/1:0,14:14:32.90:737,33,0	1/1:3,10:13:15.93:298,16,0	1/1:3,14:17:42.14:937,42,0	0/0:23,0:23:60.20:0,60,958	0/0:19,0:19:54.18:0,54,878	0/0:12,0:12:36.12:0,36,588
chr10	92859248	.	CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	C	1445.07	PASS	AB=0.836;AC=5;AF=0.096;AN=52;BaseQRankSum=4.103;DP=490;FS=21.071;HRun=0;HaplotypeScore=302.6794;InbreedingCoeff=0.3894;MQ=39.57;MQ0=44;MQRankSum=-4.650;QD=20.94;ReadPosRankSum=2.518;VQSLOD=0.5488;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:32:27.45:0,27,872	0/0:15,0:13:33.04:0,33,1795	./.	./.	0/0:15,0:15:18.01:0,18,1231	0/1:10,10:23:1:687,0,1	0/0:14,0:11:12.13:0,12,68	0/0:26,0:24:69:0,69,1989	0/0:23,0:19:39.13:0,39,2940	0/0:22,0:20:57:0,57,4271	0/0:16,0:14:18.02:0,18,1205	0/0:12,1:18:4.85:0,5,22	0/1:18,1:21:99:587,0,135	1/1:9,3:12:2.47:159,2,0	0/0:25,0:24:39.56:0,40,3646	0/0:17,0:17:27.51:0,28,1196	0/0:27,0:24:49.94:0,50,3468	0/1:9,0:8:66.97:120,0,67	0/0:17,0:17:45.01:0,45,1890	0/0:16,0:15:20.90:0,21,1813	0/0:24,0:17:27.92:0,28,1713	0/0:10,2:11:1.89:0,2,3	0/0:10,1:10:1.89:0,2,3	0/0:11,0:11:0.22:0,0,0	0/0:8,3:10:1.89:0,2,2	0/0:29,0:28:75.21:0,75,5656	0/0:18,0:18:33.10:0,33,2505	0/0:12,0:10:24.08:0,24,2344
chr10	92859281	.	TGA	T	703.78	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=2.962;DP=484;FS=33.107;HRun=0;HaplotypeScore=103.1989;InbreedingCoeff=-0.1499;MQ=51.10;MQ0=38;MQRankSum=-3.377;QD=2.30;ReadPosRankSum=-3.651;VQSLOD=-0.4217;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:33:63.08:63,0,108	0/0:10,0:10:20.92:0,21,220	0/1:22,0:8:52.03:52,0,71	0/1:22,0:10:16.97:39,0,17	0/0:8,5:13:14.94:0,15,189	1/1:22,0:20:0.42:1,0,0	0/0:4,0:3:3:0,3,25	0/1:34,0:32:70.75:305,0,71	0/1:22,0:20:34.99:35,0,237	0/1:26,0:24:60.73:61,0,391	0/0:14,2:13:6.04:0,6,246	0/1:11,0:11:0:0,0,0	0/0:5,0:5:4.79:0,5,42	0/0:17,0:15:2.67:0,3,17	0/0:28,0:28:61.19:0,61,665	0/1:22,0:22:52.67:53,0,234	0/0:24,0:22:11.62:0,12,421	0/0:6,0:5:2:0,2,6	0/1:18,0:17:20.57:21,0,306	0/0:16,0:15:5.19:0,5,288	0/0:18,0:15:5.01:0,5,249	0/1:5,0:4:0:0,0,0	0/0:11,0:10:5.90:0,6,48	0/1:9,0:7:0.01:0,0,0	0/1:5,0:4:0:0,0,0	0/1:39,0:37:99:169,0,559	0/1:11,0:11:34.20:34,0,155	0/0:10,0:10:26.90:0,27,339
chr10	92859283	.	A	AGT	862.04	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=1.191;DP=491;FS=8.314;HRun=0;HaplotypeScore=108.6286;InbreedingCoeff=0.4442;MQ=52.93;MQ0=37;MQRankSum=-1.837;QD=6.95;ReadPosRankSum=-3.524;VQSLOD=1.8844;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:33:17.43:0,17,217	0/0:10,0:10:24.02:0,24,278	0/0:24,0:10:6.14:0,6,139	0/1:23,0:11:4.58:5,0,84	0/0:12,0:12:15:0,15,147	0/0:23,0:21:8.69:0,9,82	0/0:6,0:5:2.95:0,3,33	1/1:19,19:37:24.65:951,25,0	0/0:21,0:19:21.80:0,22,225	0/1:26,0:24:4.29:4,0,364	0/0:15,0:12:25.59:0,26,261	0/1:11,0:11:0:0,0,0	0/0:7,0:7:14.96:0,15,155	0/0:18,0:16:2.69:0,3,32	0/0:28,0:28:60:0,60,713	0/0:23,0:23:29.39:0,29,395	0/0:23,0:22:43.80:0,44,489	0/1:6,0:5:0:0,0,0	0/0:20,0:19:36.07:0,36,406	0/0:15,0:14:27.03:0,27,283	0/0:17,0:14:26.76:0,27,289	0/1:5,0:4:0:0,0,0	0/0:11,0:10:5.93:0,6,70	0/1:9,0:8:0.15:0,0,0	0/1:5,0:4:0:0,0,0	0/0:36,0:34:53.40:0,53,647	0/0:11,0:11:12.67:0,13,116	0/0:9,0:9:26.93:0,27,253
chr10	92860995	.	G	GT	6626.21	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=8.923;DP=589;FS=6.613;HRun=2;HaplotypeScore=90.4449;InbreedingCoeff=0.9900;MQ=78.47;MQ0=0;MQRankSum=-14.372;QD=36.81;ReadPosRankSum=0.503;VQSLOD=5.0726;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,99,1227	0/0:8,0:8:18.06:0,18,223	0/0:18,0:18:54.13:0,54,653	0/0:20,0:20:60.17:0,60,714	0/0:29,0:29:81.23:0,81,979	1/1:2,22:24:66.18:927,66,0	1/1:2,18:20:57.15:795,57,0	0/0:27,0:27:72.23:0,72,891	0/0:23,0:23:66.21:0,66,818	0/0:16,0:16:42.13:0,42,521	0/0:23,0:23:63.20:0,63,781	1/1:3,13:16:42.11:581,42,0	1/1:1,17:18:51.09:688,51,0	1/1:3,17:20:57.07:751,57,0	0/0:30,0:30:87.27:0,87,1079	0/0:23,0:23:63.20:0,63,781	0/0:17,0:17:51.14:0,51,618	1/1:1,4:5:9.03:130,9,0	0/0:14,0:14:39.10:0,39,469	0/0:21,0:21:63.20:0,63,781	0/0:44,0:44:99:0,105,1274	1/1:2,21:23:60.16:839,60,0	1/1:1,23:24:57.19:818,57,0	1/1:0,12:12:29.92:431,30,0	1/1:0,18:18:48.12:666,48,0	0/0:23,0:23:66.21:0,66,818	0/0:25,0:24:69.21:0,69,851	0/0:10,0:10:30.09:0,30,372
chr10	92861010	.	TA	T	1269.03	PASS	AB=0.976;AC=15;AF=0.268;AN=56;BaseQRankSum=13.359;DP=518;FS=18.428;HRun=1;HaplotypeScore=115.3299;InbreedingCoeff=0.5845;MQ=83.28;MQ0=0;MQRankSum=-14.023;QD=7.64;ReadPosRankSum=2.230;VQSLOD=-0.3003;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.16:0,69,961	0/0:4,0:4:12.02:0,12,165	0/0:20,0:20:53.63:0,54,656	0/0:24,0:24:43.86:0,44,562	0/0:20,0:20:60.15:0,60,849	0/1:22,0:22:19.92:137,0,20	1/1:18,0:18:15.72:173,16,0	0/0:21,0:21:58.04:0,58,785	0/0:21,0:21:60.19:0,60,914	0/0:10,0:10:29.98:0,30,401	0/0:20,0:20:54.18:0,54,850	1/1:18,1:19:27.14:223,27,0	0/1:13,2:15:2.87:147,0,3	1/1:15,0:15:2.35:141,2,0	0/0:28,0:28:78.23:0,78,1189	0/0:20,0:20:57.16:0,57,837	0/0:14,0:14:39.09:0,39,564	0/1:3,0:3:3.25:3,0,12	0/0:16,0:16:48.11:0,48,643	0/0:21,0:21:60.17:0,60,880	0/0:39,0:39:96.33:0,96,1500	0/1:23,0:23:7.99:188,0,8	1/1:22,2:24:15.47:162,15,0	0/1:10,0:10:7.50:8,0,85	1/1:14,3:17:45.40:263,45,0	0/0:21,0:21:63.17:0,63,937	0/0:23,0:22:69.21:0,69,1037	0/0:6,0:6:18.03:0,18,245
chr10	92861011	.	AC	A	3593.41	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=12.067;DP=512;FS=17.377;HRun=7;HaplotypeScore=109.7244;InbreedingCoeff=0.9501;MQ=82.00;MQ0=0;MQRankSum=-12.792;QD=21.52;ReadPosRankSum=-0.946;VQSLOD=2.0437;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:57.17:0,57,702	0/0:4,0:4:9.02:0,9,102	0/0:18,0:19:14.04:0,14,353	0/0:23,0:23:33.99:0,34,350	0/0:19,0:19:51.16:0,51,641	1/1:4,18:22:44.12:433,44,0	1/1:5,13:18:42.04:411,42,0	0/0:20,1:20:11.47:0,11,431	0/0:20,0:20:57.18:0,57,717	0/0:10,0:10:24.07:0,24,292	0/0:20,0:20:54.17:0,54,677	1/1:4,15:19:45.10:457,45,0	1/1:6,10:16:36.08:365,36,0	1/1:3,12:15:36.05:360,36,0	0/0:27,0:27:72.23:0,72,900	0/0:20,0:20:51.16:0,51,641	0/0:14,0:14:36.10:0,36,440	1/1:2,1:3:5.97:50,6,0	0/0:15,0:15:36.03:0,36,433	0/0:21,0:21:54.17:0,54,677	0/0:36,0:37:96.31:0,96,1207	1/1:4,19:23:57.11:573,57,0	1/1:5,20:25:39.08:395,39,0	1/1:5,5:10:6:61,6,0	1/1:3,13:16:48.11:487,48,0	0/0:22,0:22:63.19:0,63,771	0/0:23,0:22:66.19:0,66,802	0/0:6,0:6:18.02:0,18,209
chr10	92861018	.	CA	C	1318.85	PASS	AB=0.974;AC=18;AF=0.321;AN=56;BaseQRankSum=12.051;DP=502;FS=20.851;HRun=1;HaplotypeScore=123.9145;InbreedingCoeff=0.7943;MQ=82.08;MQ0=0;MQRankSum=-12.479;QD=8.35;ReadPosRankSum=0.453;VQSLOD=-0.2293;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.06:0,57,656	0/0:5,0:5:9.71:0,10,80	0/0:23,0:23:15.07:0,15,484	0/0:20,0:20:2.56:0,3,274	0/0:19,0:19:54.15:0,54,669	0/1:22,0:22:2.49:162,0,2	0/1:17,1:18:2.61:144,0,3	0/0:21,0:20:43.65:0,44,503	0/0:22,0:22:63.09:0,63,775	0/0:10,0:10:24.05:0,24,305	0/0:21,0:21:54.07:0,54,596	1/1:19,1:20:12.70:184,13,0	1/1:16,0:16:7.91:135,8,0	1/1:14,1:15:21.80:155,22,0	0/0:28,0:28:75.18:0,75,944	0/0:19,0:19:54:0,54,656	0/0:13,0:13:39.08:0,39,475	1/1:1,0:1:2.50:9,2,0	0/0:12,0:12:33.97:0,34,425	0/0:22,0:22:63.16:0,63,776	0/0:39,0:39:99:0,99,1271	1/1:21,1:22:50.82:280,51,0	1/1:23,0:23:36.34:187,36,0	1/1:5,0:5:5.55:26,6,0	1/1:16,0:16:44.62:229,45,0	0/0:21,0:21:63.20:0,63,810	0/0:22,0:21:60.11:0,60,759	0/0:6,0:6:18.04:0,18,220
chr10	92861090	.	CCA	C	14122.27	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=13.257;DP=551;FS=9.972;HRun=0;HaplotypeScore=207.3080;InbreedingCoeff=0.9690;MQ=65.51;MQ0=0;MQRankSum=-10.296;QD=31.04;ReadPosRankSum=2.651;VQSLOD=5.0646;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:39:74.98:1023,75,0	0/0:12,0:12:30.10:0,30,539	0/0:25,0:23:52.74:0,53,961	0/0:20,0:17:24.84:0,25,559	1/1:0,18:18:18.02:234,18,0	1/1:1,23:24:66.22:926,66,0	1/1:7,15:22:47.91:630,48,0	1/1:3,21:23:60.14:781,60,0	1/1:0,17:17:45.15:643,45,0	1/1:0,22:22:60.16:815,60,0	1/1:1,14:15:33.11:470,33,0	1/1:3,23:26:66.20:893,66,0	1/1:0,10:10:30.10:427,30,0	1/1:3,12:15:33.11:469,33,0	0/0:24,0:24:72.25:0,72,1276	1/1:2,17:19:48.16:686,48,0	0/0:15,0:15:33.05:0,33,729	1/1:1,3:4:12.02:152,12,0	1/1:1,15:15:42.03:487,42,0	1/1:3,17:20:40.01:534,40,0	1/1:3,35:38:67.11:945,67,0	1/1:4,23:27:56.95:736,57,0	1/1:2,11:13:21.07:292,21,0	1/1:0,4:4:9.03:128,9,0	1/1:4,24:28:69.19:948,69,0	1/1:2,28:30:84.20:1135,84,0	1/1:3,15:18:42.14:597,42,0	1/1:0,6:6:12.04:171,12,0
chr10	92861131	.	TC	T	2875.45	PASS	AB=0.962;AC=21;AF=0.375;AN=56;BaseQRankSum=13.902;DP=707;FS=4.399;HRun=3;HaplotypeScore=207.5921;InbreedingCoeff=0.9095;MQ=52.92;MQ0=5;MQRankSum=-14.045;QD=12.61;ReadPosRankSum=1.814;VQSLOD=2.6007;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:47:86.85:0,87,1466	0/0:8,0:8:24.08:0,24,345	0/1:48,2:32:11:11,0,835	0/0:37,1:19:18.12:0,18,406	0/0:24,0:24:45.15:0,45,647	1/1:16,7:23:37.89:321,38,0	1/1:18,6:24:22.94:229,23,0	0/0:36,0:36:93.67:0,94,1272	0/0:23,0:23:63.20:0,63,881	0/0:37,0:37:99:0,102,1444	0/0:16,0:15:36.11:0,36,493	1/1:8,11:19:41.20:464,41,0	1/1:3,10:13:35.25:370,35,0	1/1:7,8:15:22.07:206,22,0	0/0:33,0:33:99:0,99,1387	0/0:25,0:25:66.20:0,66,930	0/0:19,1:20:51.15:0,51,713	1/1:5,2:7:8.62:84,9,0	0/0:27,0:25:69.20:0,69,945	0/0:23,0:23:56.73:0,57,778	0/0:59,2:62:35.44:0,35,1524	1/1:6,24:29:42.69:543,43,0	1/1:9,6:15:14.97:185,15,0	1/1:4,3:7:13.57:131,14,0	1/1:9,16:25:38.46:549,38,0	0/0:32,0:32:84.27:0,84,1192	0/0:21,0:21:57.13:0,57,778	0/0:7,0:7:15.05:0,15,216
chr10	92861132	.	C	CCATCCAT	6568.21	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=10.837;DP=716;FS=1.815;HRun=0;HaplotypeScore=262.9007;InbreedingCoeff=0.9059;MQ=52.60;MQ0=7;MQRankSum=-13.770;QD=27.37;ReadPosRankSum=0.611;VQSLOD=4.3890;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,110,2440	0/0:8,0:8:24.08:0,24,628	0/1:49,0:31:31.79:32,0,1310	0/0:34,0:17:17.99:0,18,608	0/0:24,0:24:45.63:0,46,1159	1/1:10,0:24:45.14:944,45,0	1/1:9,0:25:27.04:325,27,0	0/0:39,0:37:74.90:0,75,1754	0/0:24,0:24:63.20:0,63,1550	0/0:37,0:37:99:0,105,2511	0/0:16,0:15:36.11:0,36,775	1/1:12,8:21:45.15:1059,45,0	1/1:12,2:15:36.12:767,36,0	1/1:11,4:15:30.10:764,30,0	0/0:33,0:33:99:0,99,2493	0/0:24,0:24:66.21:0,66,1598	0/0:19,0:19:56.84:0,57,1227	1/1:2,5:9:9.03:216,9,0	0/0:27,0:25:69.20:0,69,1460	0/0:22,0:22:56.83:0,57,1373	0/0:63,0:62:86.77:0,87,2752	1/1:28,4:30:50.72:810,51,0	1/1:8,8:17:14.13:288,14,0	1/1:4,3:9:15.05:406,15,0	1/1:18,6:23:51.99:958,52,0	0/0:32,0:32:84.28:0,84,2077	0/0:20,0:20:57.14:0,57,1366	0/0:7,0:7:15.05:0,15,404
chr10	92861136	.	TCCAC	T	668.95	PASS	AB=0.974;AC=12;AF=0.214;AN=56;BaseQRankSum=8.953;DP=709;FS=0.000;HRun=0;HaplotypeScore=236.1258;InbreedingCoeff=-0.0294;MQ=51.35;MQ0=7;MQRankSum=-8.587;QD=2.91;ReadPosRankSum=-3.167;VQSLOD=1.7447;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:48:99:0,116,1976	0/0:8,0:8:24.08:0,24,596	0/0:43,0:25:70.01:0,70,835	0/0:33,0:16:34.70:0,35,441	0/0:25,0:25:44.75:0,45,1146	0/1:22,0:23:33.34:33,0,186	0/1:22,0:22:32.34:76,0,32	0/1:41,0:39:27.04:27,0,770	0/0:23,0:23:60.13:0,60,1308	0/0:37,0:37:99:0,102,2158	0/0:16,0:15:32.80:0,33,534	0/1:22,0:22:88.20:98,0,88	0/1:15,2:17:53.43:89,0,53	0/1:13,1:14:42.44:42,0,85	0/0:35,0:35:99:0,105,2480	0/0:23,0:23:63.19:0,63,1421	0/0:17,0:17:42.11:0,42,959	0/1:7,0:7:23.37:32,0,23	0/0:24,0:22:54.06:0,54,925	0/0:24,0:24:59.54:0,60,1149	0/0:64,0:64:99:0,124,2491	1/1:32,0:30:13.45:152,13,0	0/1:17,0:17:5.77:51,0,6	0/1:10,1:11:17.66:52,0,18	0/1:24,0:23:45.67:173,0,46	0/0:29,0:29:78.14:0,78,1707	0/0:20,0:20:57.12:0,57,1295	0/0:9,0:9:21.07:0,21,507
chr10	92861164	.	C	CCCAT	5411.14	PASS	AB=0.962;AC=19;AF=0.339;AN=56;BaseQRankSum=7.999;DP=748;FS=2.802;HRun=0;HaplotypeScore=188.0017;InbreedingCoeff=0.9201;MQ=62.23;MQ0=10;MQRankSum=-8.594;QD=27.47;ReadPosRankSum=-4.728;VQSLOD=4.0187;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:35.99:0,36,704	0/0:7,0:7:18.06:0,18,304	0/0:39,0:24:30.01:0,30,389	0/0:36,0:29:47:0,47,674	0/0:30,0:30:66.20:0,66,1054	1/1:21,6:27:56.61:902,57,0	0/1:24,1:25:12.27:393,0,12	0/0:46,0:44:65.12:0,65,818	0/0:26,0:26:63.12:0,63,977	0/0:35,0:35:99:0,102,1613	0/0:12,0:11:27.08:0,27,430	1/1:19,3:22:26.98:455,27,0	1/1:16,2:18:42.07:741,42,0	1/1:18,4:22:57.09:937,57,0	0/0:38,0:38:96.29:0,96,1536	0/0:24,0:23:57.17:0,57,915	0/0:21,0:21:49.41:0,49,781	1/1:17,0:17:32.91:440,33,0	0/0:16,0:14:30.10:0,30,502	0/0:23,0:23:57.14:0,57,853	0/0:67,0:66:99:0,120,2119	1/1:18,2:18:30.01:504,30,0	1/1:15,1:16:14.92:178,15,0	1/1:15,1:16:24.07:431,24,0	1/1:11,3:14:32.73:430,33,0	0/0:36,0:36:87.28:0,87,1398	0/0:26,0:26:72.22:0,72,1159	0/0:14,0:14:30.07:0,30,442
chr10	92861252	.	CCCATCCAT	C	4492.53	PASS	AB=0.707;AC=15;AF=0.278;AN=54;BaseQRankSum=8.031;DP=695;FS=55.386;HRun=0;HaplotypeScore=187.9615;InbreedingCoeff=0.7025;MQ=58.87;MQ0=7;MQRankSum=-9.252;QD=25.38;ReadPosRankSum=2.539;VQSLOD=2.1124;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:34:51.45:0,51,497	0/0:16,0:16:36.12:0,36,1376	0/0:51,0:39:52.06:0,52,1671	0/0:39,0:31:44.40:0,44,1284	0/0:21,0:20:39.13:0,39,1554	0/1:9,5:14:4.46:320,0,4	0/1:14,21:34:53.43:567,0,53	0/0:31,0:30:40.69:0,41,1300	0/0:30,0:30:81.28:0,81,3197	0/0:31,0:31:78.26:0,78,2842	0/0:9,0:9:18.06:0,18,745	1/1:9,12:21:45.15:1100,45,0	1/1:9,12:21:33.11:823,33,0	1/1:9,4:13:15.05:385,15,0	0/0:30,0:30:69.22:0,69,2612	0/0:19,0:19:42.14:0,42,1724	0/0:24,0:26:66.21:0,66,2531	1/1:8,8:16:6.02:154,6,0	0/0:21,0:20:36.12:0,36,1172	0/0:17,0:17:33.11:0,33,1210	0/0:77,0:78:99:0,132,5126	1/1:10,6:16:12:207,12,0	./.	0/1:15,7:22:99:319,0,104	1/1:12,7:19:24.08:617,24,0	0/0:32,0:33:66.21:0,66,2491	0/0:20,0:20:42.14:0,42,1535	0/0:6,0:6:6.02:0,6,236
chr10	92861923	.	CT	C	7871.47	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.565;DP=670;FS=10.524;HRun=4;HaplotypeScore=67.6769;InbreedingCoeff=0.9985;MQ=81.25;MQ0=0;MQRankSum=-0.316;QD=31.49;ReadPosRankSum=3.604;VQSLOD=4.8770;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.31:0,96,1324	0/0:9,0:9:27.09:0,27,378	0/0:20,0:20:54.17:0,54,719	0/0:19,0:19:40.52:0,41,547	0/0:22,0:22:66.21:0,66,908	1/1:1,22:23:66.20:792,66,0	1/1:2,30:32:72.47:960,72,0	0/0:28,0:28:78.24:0,78,1062	0/0:31,0:31:90.30:0,90,1260	0/0:22,0:22:63.21:0,63,870	0/0:10,0:10:27.09:0,27,377	1/1:0,27:27:69.21:828,69,0	1/1:0,16:16:42.13:504,42,0	1/1:1,18:19:45.14:540,45,0	0/0:29,0:29:87.29:0,87,1218	0/0:30,0:30:90.30:0,90,1259	0/0:36,0:36:99:0,105,1449	1/1:2,19:21:57.17:684,57,0	0/0:21,0:21:60.16:0,60,775	0/0:22,0:22:63.20:0,63,865	0/0:39,0:39:99:0,117,1633	1/1:2,18:20:48.15:576,48,0	1/1:1,28:29:84.26:1008,84,0	1/1:0,37:37:93.29:1116,93,0	1/1:1,25:26:72.22:864,72,0	0/0:26,0:26:75.25:0,75,1049	0/0:17,0:17:48.15:0,48,657	0/0:6,0:6:18.06:0,18,252
chr10	92862042	.	GTCAC	G	2601.12	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=2.071;DP=547;FS=10.084;HRun=0;HaplotypeScore=99.5000;InbreedingCoeff=0.8930;MQ=68.08;MQ0=11;MQRankSum=-2.215;QD=11.36;ReadPosRankSum=1.246;VQSLOD=2.3488;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:59.76:501,60,0	0/0:8,0:7:18.01:0,18,227	0/0:27,0:20:56.82:0,57,540	0/0:35,0:17:50.79:0,51,464	0/0:17,0:17:19.88:0,20,202	1/1:11,0:11:29.99:275,30,0	1/1:26,0:26:38.90:337,39,0	1/1:22,0:22:56.93:495,57,0	0/0:17,0:17:41.97:0,42,407	0/0:20,0:20:45.02:0,45,468	0/0:10,0:8:23.98:0,24,205	1/1:3,15:18:9.40:149,9,0	1/1:1,11:12:6.02:110,6,0	1/1:1,11:12:12.04:205,12,0	0/0:16,0:16:39.03:0,39,512	0/0:22,0:21:2.55:0,3,389	0/0:36,0:36:35.72:0,36,1100	1/1:15,0:15:12.02:136,12,0	0/0:17,0:16:38.36:0,38,356	0/0:16,0:16:45:0,45,448	0/0:36,0:35:45.40:0,45,687	1/1:0,22:22:3.01:56,3,0	1/1:10,0:10:18.87:179,19,0	1/1:3,33:36:14.94:279,15,0	1/1:1,16:16:6.02:94,6,0	0/0:16,0:15:39.04:0,39,366	0/0:20,0:20:47.50:0,48,407	0/0:5,0:5:11.20:0,11,88
chr10	92862043	.	TCACTCA	T	2137.66	PASS	AB=0.974;AC=24;AF=0.429;AN=56;BaseQRankSum=1.434;DP=538;FS=9.161;HRun=0;HaplotypeScore=115.1483;InbreedingCoeff=0.7657;MQ=68.24;MQ0=11;MQRankSum=-0.182;QD=9.38;ReadPosRankSum=1.094;VQSLOD=1.9014;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,1:27:59.76:545,60,0	0/0:8,0:7:18.02:0,18,303	0/0:27,0:20:56.82:0,57,540	0/0:35,0:17:50.79:0,51,464	0/0:16,0:16:23.62:0,24,279	1/1:9,1:11:30.01:354,30,0	1/1:21,3:24:38.02:369,38,0	1/1:18,0:22:56.93:495,57,0	0/0:17,0:17:42.01:0,42,500	0/0:20,0:20:45.05:0,45,590	0/0:10,0:8:24.01:0,24,282	0/1:17,1:18:13.50:80,0,14	1/1:12,0:12:5.22:23,5,0	1/1:11,0:11:4.65:29,5,0	0/0:16,0:16:39.07:0,39,708	0/0:23,0:22:11.95:0,12,556	0/0:36,0:36:83.74:0,84,1456	1/1:0,13:15:12.02:196,12,0	0/0:17,0:16:38.38:0,38,422	0/0:16,0:16:48.07:0,48,662	0/0:35,0:34:86.42:0,86,964	1/1:22,0:22:2.74:12,3,0	1/1:8,0:8:18.53:135,19,0	1/1:35,0:36:13.68:58,14,0	1/1:17,0:16:5.73:34,6,0	0/0:15,0:14:39.04:0,39,389	0/0:19,0:19:47.63:0,48,529	0/1:5,0:5:17.75:18,0,156
chr10	92862047	.	TCA	T	1071.63	PASS	AB=0.872;AC=42;AF=0.840;AN=50;BaseQRankSum=4.917;DP=540;FS=4.978;HRun=0;HaplotypeScore=89.7801;InbreedingCoeff=-0.2159;MQ=65.95;MQ0=11;MQRankSum=0.923;QD=2.32;ReadPosRankSum=2.183;VQSLOD=1.5963;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:4.12:18,4,0	0/1:7,1:7:18.93:26,0,19	./.	./.	1/1:9,2:14:3:32,3,0	1/1:11,0:11:6.76:43,7,0	1/1:21,0:21:2.84:14,3,0	./.	0/1:14,6:20:27.83:84,0,28	1/1:13,5:18:8.76:90,9,0	1/1:10,0:8:6.01:58,6,0	1/1:18,0:18:10.49:55,10,0	1/1:11,0:11:5.36:22,5,0	1/1:12,0:12:3.82:26,4,0	0/1:15,2:17:14.09:14,0,199	0/1:14,5:21:26.61:89,0,27	0/1:33,1:39:41.63:42,0,392	1/1:16,0:16:8.56:42,9,0	1/1:13,3:15:6.01:64,6,0	1/1:10,6:16:15.42:135,15,0	1/1:35,1:35:17.65:129,18,0	1/1:22,0:22:2.93:11,3,0	1/1:11,0:11:2.60:10,3,0	0/1:37,0:37:8.90:36,0,9	0/1:20,0:19:4.79:5,0,35	1/1:14,0:13:3:26,3,0	0/1:15,4:19:28.57:55,0,29	1/1:4,3:7:8.69:76,9,0
chr10	92862160	.	GT	G	1112.67	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.489;DP=677;FS=15.853;HRun=2;HaplotypeScore=66.8776;InbreedingCoeff=0.9916;MQ=87.91;MQ0=0;MQRankSum=-2.742;QD=33.72;ReadPosRankSum=2.740;VQSLOD=2.2239;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:93.30:1208,93,0	0/0:12,0:12:36.11:0,36,517	0/0:22,0:22:63.21:0,63,943	0/0:30,0:30:87.24:0,87,1247	0/0:25,0:25:75.25:0,75,1123	0/0:30,0:29:90.30:0,90,1347	0/0:32,0:32:96.32:0,96,1427	0/0:34,0:34:96.31:0,96,1404	0/0:28,0:28:84.24:0,84,1234	0/0:33,0:33:96.31:0,96,1419	0/0:16,0:16:45.15:0,45,675	0/0:18,0:18:51.17:0,51,764	0/0:19,0:19:54.15:0,54,785	0/0:15,0:15:45.15:0,45,674	0/0:24,0:24:69.23:0,69,1032	0/0:34,0:34:99:0,99,1462	0/0:40,0:40:99:0,114,1708	0/0:22,0:22:66.22:0,66,989	0/0:21,0:20:63.21:0,63,944	0/0:15,0:15:45.15:0,45,674	0/0:47,0:47:99:0,132,1915	0/0:19,0:19:57.19:0,57,854	0/0:12,0:12:33.10:0,33,473	0/0:39,0:39:99:0,111,1659	0/0:14,0:14:42.14:0,42,628	0/0:18,0:18:54.18:0,54,809	0/0:19,0:19:57.19:0,57,854	0/0:6,0:6:18.06:0,18,270
chr10	92863449	.	T	TC	9385.38	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=7.354;DP=694;FS=0.000;HRun=5;HaplotypeScore=96.2338;InbreedingCoeff=0.9983;MQ=90.14;MQ0=0;MQRankSum=-2.816;QD=33.05;ReadPosRankSum=0.688;VQSLOD=4.5803;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.19:0,75,805	0/0:12,0:12:33.08:0,33,354	0/0:31,0:31:24.31:0,24,498	0/0:28,0:29:19.06:0,19,336	0/0:13,0:13:33.08:0,33,354	1/1:0,27:27:75.24:986,75,0	1/1:4,29:33:81.26:1066,81,0	0/0:25,0:25:60.15:0,60,645	0/0:24,0:24:69.17:0,69,741	0/0:29,0:29:75.13:0,75,774	0/0:14,0:14:33.06:0,33,346	1/1:5,34:39:93.30:1217,93,0	1/1:2,19:21:44.93:592,45,0	1/1:2,26:28:78.25:1026,78,0	0/0:31,0:31:90.21:0,90,959	0/0:20,0:20:60.15:0,60,644	0/0:26,0:26:75.16:0,75,795	1/1:3,23:26:63.20:826,63,0	0/0:11,0:11:24.06:0,24,258	0/0:17,0:17:42.09:0,42,443	0/0:44,0:44:99:0,117,1257	1/1:3,26:29:69.22:902,69,0	1/1:1,18:19:51.17:671,51,0	1/1:3,35:38:96.31:1263,96,0	1/1:1,22:24:66.17:835,66,0	0/0:24,0:24:57.10:0,57,612	0/0:17,0:17:48.12:0,48,516	0/0:15,0:15:42.11:0,42,451
chr10	92863785	.	TTCTC	T	2524.32	PASS	AB=1.000;AC=39;AF=0.780;AN=50;BaseQRankSum=2.767;DP=563;FS=19.544;HRun=0;HaplotypeScore=104.1990;InbreedingCoeff=0.1614;MQ=66.04;MQ0=32;MQRankSum=1.836;QD=5.83;ReadPosRankSum=0.575;VQSLOD=0.7331;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:26:33.10:403,33,0	0/0:5,0:5:5.97:0,6,66	./.	./.	1/1:17,0:16:6.01:62,6,0	0/0:18,0:15:2.07:0,2,24	0/0:16,0:16:3.01:0,3,52	./.	1/1:14,0:13:6:62,6,0	1/1:21,5:26:15.04:184,15,0	1/1:17,0:17:6.02:83,6,0	1/1:23,0:23:21.05:271,21,0	0/1:18,0:14:4.25:4,0,42	1/1:17,0:17:5.76:75,6,0	0/1:24,0:23:74.07:74,0,86	1/1:15,0:17:8.61:109,9,0	1/1:16,0:16:20.10:250,20,0	0/1:22,0:20:13.82:37,0,14	1/1:17,0:16:3.01:49,3,0	1/1:16,0:16:12.01:123,12,0	1/1:27,0:24:24.08:319,24,0	1/1:20,0:20:6.53:27,7,0	0/1:20,0:18:35.19:35,0,43	0/1:38,0:30:57.78:58,0,324	1/1:12,0:12:5.74:64,6,0	1/1:22,0:23:20.72:265,21,0	1/1:9,0:11:3.01:37,3,0	1/1:8,0:7:6.02:74,6,0
chr10	92863832	.	TCACACACACA	T	1145.03	PASS	AB=0.952;AC=21;AF=0.438;AN=48;BaseQRankSum=2.659;DP=473;FS=14.705;HRun=0;HaplotypeScore=141.3710;InbreedingCoeff=0.3652;MQ=38.98;MQ0=61;MQRankSum=0.073;QD=4.56;ReadPosRankSum=-0.220;VQSLOD=1.9670;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:22:0:0,0,0	0/0:4,0:4:2.99:0,3,24	./.	./.	./.	1/1:20,0:24:8.93:117,9,0	0/1:14,0:13:0.14:0,0,0	0/0:16,0:16:8.32:0,8,63	1/1:11,3:15:9.03:210,9,0	0/0:20,0:17:0.47:0,0,1	1/1:7,0:6:3.01:88,3,0	0/0:20,0:18:9.03:0,9,160	0/0:18,0:13:8.18:0,8,116	0/0:13,0:19:0.47:0,0,1	0/0:22,0:20:12.51:0,13,316	1/1:12,0:14:2.69:82,3,0	0/0:24,0:21:26.98:0,27,667	0/0:16,0:12:0.31:0,0,34	1/1:6,0:8:5.97:167,6,0	0/1:11,3:13:0:0,0,0	0/1:28,0:24:99:163,0,142	1/1:11,0:13:0.47:1,0,0	0/0:10,0:10:0:0,0,0	0/1:48,0:34:40.57:41,0,143	0/1:22,0:19:1.53:2,0,53	1/1:16,4:20:8.74:239,9,0	1/1:16,0:17:6.02:168,6,0	./.
chr10	92864819	.	AG	A	4820.80	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=11.374;DP=593;FS=1.118;HRun=7;HaplotypeScore=60.1239;InbreedingCoeff=0.9978;MQ=88.05;MQ0=0;MQRankSum=0.249;QD=23.63;ReadPosRankSum=2.113;VQSLOD=5.0460;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,138,1677	0/0:10,0:10:30.10:0,30,377	0/0:29,0:28:65.26:0,65,737	0/0:24,0:22:46.01:0,46,506	0/0:17,0:17:42.11:0,42,501	1/1:2,9:11:18.10:264,18,0	1/1:5,25:30:60.13:611,60,0	0/0:20,0:20:54.15:0,54,649	0/0:19,0:19:45.13:0,45,548	0/0:19,0:19:51.15:0,51,618	0/0:8,0:8:24.06:0,24,289	1/1:3,26:29:69.15:703,69,0	1/1:1,18:19:51.12:520,51,0	1/1:4,16:20:42.09:428,42,0	0/0:16,0:16:42.12:0,42,503	0/0:14,0:14:36.12:0,36,453	0/0:32,0:32:87.28:0,87,1089	1/1:0,19:19:51.12:520,51,0	0/0:26,0:26:72.03:0,72,852	0/0:15,0:15:45.14:0,45,566	0/0:29,0:29:87.20:0,87,1033	1/1:0,12:12:36.08:367,36,0	1/1:1,8:9:21.04:214,21,0	1/1:6,29:35:66.15:673,66,0	1/1:2,18:20:51.11:520,51,0	0/0:21,0:21:60.19:0,60,755	0/0:23,0:23:66.21:0,66,829	0/0:16,0:16:39.12:0,39,488
chr10	92865776	.	G	GTTTC	1063.61	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.038;DP=742;FS=4.651;HRun=0;HaplotypeScore=147.2472;InbreedingCoeff=0.9010;MQ=65.49;MQ0=0;MQRankSum=-3.889;QD=30.39;ReadPosRankSum=-3.737;VQSLOD=2.6609;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,1645	0/0:3,0:3:6.02:0,6,102	0/0:17,0:15:26.65:0,27,424	0/0:12,0:11:21.07:0,21,305	0/0:18,0:18:42.14:0,42,707	0/0:18,0:18:42.13:0,42,683	0/0:31,0:31:81.22:0,81,1250	1/1:21,14:35:54.18:1158,54,0	0/0:40,0:40:99:0,108,1755	0/0:39,0:39:90.29:0,90,1468	0/0:19,0:19:51.17:0,51,855	0/0:23,0:23:54.18:0,54,884	0/0:30,0:30:78.27:0,78,1317	0/0:35,0:35:90.28:0,90,1469	0/0:29,0:28:72.25:0,72,1211	0/0:25,0:25:69.22:0,69,1137	0/0:28,0:28:63.20:0,63,1022	0/0:28,0:28:72.23:0,72,1172	0/0:22,0:22:42.11:0,42,636	0/0:24,0:24:51.14:0,51,801	0/0:30,0:30:48.13:0,48,760	0/0:20,0:20:57.19:0,57,959	0/0:24,0:24:48.16:0,48,801	0/0:32,0:32:81.14:0,81,1279	0/0:34,0:34:90.28:0,90,1440	0/0:38,0:38:84.22:0,84,1332	0/0:26,0:26:69.23:0,69,1137	0/0:24,0:24:45.14:0,45,734
chr10	92866805	.	A	AGCAGAAGACG	28268.98	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-4.107;DP=711;FS=1.701;HRun=0;HaplotypeScore=197.0163;InbreedingCoeff=0.9996;MQ=84.22;MQ0=0;MQRankSum=-19.926;QD=105.48;ReadPosRankSum=-3.018;VQSLOD=4.1922;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,25:42:99:4541,102,0	0/0:10,0:10:27.08:0,27,757	0/0:31,0:31:67.92:0,68,1787	0/0:26,0:26:69.24:0,69,1916	0/0:19,0:19:57.20:0,57,1851	1/1:8,8:18:45.15:1785,45,0	1/1:25,8:36:81.28:3154,81,0	1/1:18,6:26:66.21:2556,66,0	0/0:25,0:25:75.23:0,75,2275	0/0:26,0:26:75.26:0,75,2446	0/0:16,0:16:45.15:0,45,1454	1/1:3,17:22:57.20:2850,57,0	1/1:7,19:27:75.26:3800,75,0	1/1:10,10:22:57.20:2571,57,0	0/0:37,0:37:99:0,105,3130	0/0:33,0:33:96.33:0,96,3090	0/0:38,0:38:96.33:0,96,2992	1/1:6,4:10:27.09:1301,27,0	0/0:31,0:31:87.27:0,87,2481	0/0:26,0:26:78.25:0,78,2310	0/0:43,0:43:99:0,126,3827	1/1:6,7:13:39.13:1543,39,0	1/1:7,9:17:39.13:1566,39,0	1/1:9,7:18:30.10:1006,30,0	1/1:6,9:17:33.11:1595,33,0	0/0:27,0:27:78.25:0,78,2410	0/0:34,0:34:99:0,99,3034	0/0:21,0:21:63.18:0,63,1868
chr10	92869058	.	CT	C	6096.58	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=19.115;DP=763;FS=7.192;HRun=1;HaplotypeScore=145.4302;InbreedingCoeff=0.9979;MQ=78.02;MQ0=0;MQRankSum=-18.326;QD=32.95;ReadPosRankSum=0.031;VQSLOD=3.8576;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,153,2389	0/0:11,1:12:16.14:0,16,484	0/0:17,0:17:51.13:0,51,769	0/0:23,0:23:59.35:0,59,946	0/0:22,0:22:66.19:0,66,1002	0/0:23,0:23:69.19:0,69,1033	0/0:32,0:32:93.31:0,93,1464	0/0:35,0:35:99:0,105,1597	0/0:29,0:29:84.26:0,84,1292	0/0:31,0:31:93.29:0,93,1407	0/0:22,0:22:66.22:0,66,1047	1/1:3,17:20:57.05:696,57,0	1/1:0,24:24:72.12:910,72,0	1/1:0,17:17:48:564,48,0	0/0:38,0:38:99:0,114,1795	0/0:39,0:39:99:0,117,1801	0/0:42,0:42:99:0,126,1946	1/1:1,18:19:48.01:614,48,0	0/0:24,0:24:69.22:0,69,1061	0/0:29,0:29:87.28:0,87,1366	0/0:32,0:32:93.30:0,93,1458	1/1:0,37:37:99:1259,108,0	1/1:0,19:19:50.86:570,51,0	1/1:0,21:21:44.60:539,45,0	1/1:0,28:28:75.12:946,75,0	0/0:34,0:34:99:0,99,1558	0/0:29,0:29:87.23:0,87,1288	0/0:12,0:12:36.12:0,36,570
chr10	92869064	.	T	TG	3610.13	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=18.996;DP=722;FS=2.811;HRun=1;HaplotypeScore=160.2879;InbreedingCoeff=0.9851;MQ=78.92;MQ0=0;MQRankSum=-18.758;QD=20.87;ReadPosRankSum=-0.850;VQSLOD=3.4679;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,153,1972	0/0:12,0:12:6.87:0,7,363	0/0:17,0:17:48.15:0,48,609	0/0:23,0:23:63.16:0,63,760	0/0:21,0:21:63.18:0,63,789	0/0:21,0:21:63.20:0,63,818	0/0:31,0:31:93.27:0,93,1178	0/0:29,0:29:87.27:0,87,1107	0/0:27,0:27:78.25:0,78,1013	0/0:27,0:27:81.26:0,81,1052	0/0:21,0:21:63.20:0,63,818	1/1:7,12:19:50.41:401,50,0	1/1:5,20:25:68.10:540,68,0	1/1:4,10:15:41.31:302,41,0	0/0:36,0:36:99:0,108,1386	0/0:36,0:36:99:0,108,1403	0/0:40,0:40:99:0,120,1558	1/1:6,10:16:41.94:361,42,0	0/0:20,0:20:48.16:0,48,624	0/0:29,0:29:84.27:0,84,1090	0/0:34,0:34:99:0,102,1325	1/1:10,24:34:83.53:634,84,0	1/1:6,12:18:50.78:410,51,0	1/1:3,17:20:47.67:360,48,0	1/1:4,22:26:74.78:601,75,0	0/0:32,0:32:92.50:0,92,1206	0/0:28,0:28:84.24:0,84,1060	0/0:12,0:12:36.12:0,36,467
chr10	92869066	.	A	ACAACG	15133.92	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=19.654;DP=737;FS=0.643;HRun=0;HaplotypeScore=189.8110;InbreedingCoeff=0.9999;MQ=79.23;MQ0=0;MQRankSum=-19.043;QD=79.24;ReadPosRankSum=-1.801;VQSLOD=5.4709;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,157,3509	0/0:11,0:11:33.10:0,33,723	0/0:19,0:19:54.17:0,54,1132	0/0:23,0:23:66.20:0,66,1374	0/0:19,0:19:57.20:0,57,1325	0/0:21,0:21:63.22:0,63,1442	0/0:31,0:31:90.29:0,90,2050	0/0:29,0:29:87.29:0,87,1979	0/0:27,0:27:81.28:0,81,1861	0/0:27,0:27:81.28:0,81,1888	0/0:21,0:21:63.22:0,63,1444	1/1:7,12:19:54.19:1654,54,0	1/1:9,20:29:78.27:2381,78,0	1/1:7,11:19:57.20:1642,57,0	0/0:36,0:36:99:0,108,2462	0/0:36,0:36:99:0,108,2516	0/0:40,0:40:99:0,120,2764	1/1:9,10:19:54.17:1394,54,0	0/0:17,0:17:45.15:0,45,1049	0/0:29,0:29:84.29:0,84,1935	0/0:34,0:34:99:0,102,2377	1/1:15,24:39:99:3207,111,0	1/1:6,12:18:51.13:1271,51,0	1/1:2,17:19:44.74:1263,45,0	1/1:7,22:29:81.28:2323,81,0	0/0:32,0:32:93.31:0,93,2121	0/0:28,0:28:84.29:0,84,1947	0/0:12,0:12:36.12:0,36,837
chr10	92870156	.	TGC	T	295.53	PASS	AB=0.937;AC=9;AF=0.161;AN=56;BaseQRankSum=7.976;DP=528;FS=1.097;HRun=0;HaplotypeScore=86.4676;InbreedingCoeff=-0.1922;MQ=52.32;MQ0=25;MQRankSum=-2.580;QD=1.64;ReadPosRankSum=-1.814;VQSLOD=1.6225;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:0.72:0,1,254	0/0:9,0:8:6.47:0,6,145	0/0:30,0:7:5.14:0,5,64	0/0:30,0:12:22.62:0,23,147	0/0:15,0:13:12.76:0,13,110	0/0:9,0:8:17.52:0,18,115	0/0:15,0:14:32.38:0,32,223	0/1:11,10:20:34.86:179,0,35	0/0:14,0:14:1.94:0,2,93	0/1:22,0:22:2.50:3,0,312	0/0:5,6:11:8.67:0,9,66	0/1:25,1:23:2.07:2,0,203	0/0:13,0:13:7.43:0,7,129	0/1:11,4:15:3.42:3,0,123	0/0:27,0:25:56.31:0,56,518	0/0:19,0:17:11.96:0,12,130	0/1:31,0:27:13.35:13,0,355	0/1:19,0:18:66.44:66,0,131	0/1:19,0:19:6.81:7,0,240	0/0:10,0:10:22.80:0,23,150	0/0:27,0:24:42.77:0,43,332	0/0:12,0:12:10.86:0,11,109	0/0:12,0:11:14.98:0,15,183	0/0:39,0:38:49.97:0,50,444	0/0:12,0:11:2.60:0,3,136	0/1:19,0:19:99:105,0,184	0/0:14,0:13:17.66:0,18,171	0/1:8,0:6:9.46:38,0,9
chr10	92870158	.	CGTGT	C	408.54	PASS	AB=0.922;AC=18;AF=0.375;AN=48;BaseQRankSum=0.698;DP=529;FS=0.000;HRun=0;HaplotypeScore=101.1647;InbreedingCoeff=0.1635;MQ=50.38;MQ0=27;MQRankSum=-0.208;QD=1.78;ReadPosRankSum=-0.282;VQSLOD=1.2026;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:12.04:0,12,206	0/0:11,0:10:17.76:0,18,268	./.	./.	0/0:13,0:11:2.37:0,2,9	./.	./.	1/1:19,0:18:2.86:17,3,0	0/0:14,0:14:4.73:0,5,27	0/1:15,6:22:75.43:75,0,127	0/1:11,0:12:0.17:0,0,0	0/1:26,0:24:21.16:35,0,21	0/1:13,0:14:0.04:93,0,0	0/1:15,0:16:2.82:25,0,3	0/0:26,0:24:12.04:0,12,256	1/1:11,7:16:2.80:46,3,0	0/0:29,0:25:21.27:0,21,344	0/1:18,0:17:8.91:9,0,42	0/1:14,5:19:29.97:110,0,30	0/1:9,0:10:0:0,0,0	0/0:29,0:26:2.68:0,3,11	1/1:13,0:13:3:28,3,0	0/0:8,0:11:6.02:0,6,140	0/0:38,1:38:13.75:0,14,274	1/1:10,1:11:6:70,6,0	0/1:20,0:19:0.71:31,0,1	0/0:15,0:14:3.44:0,3,21	0/1:9,0:7:1.88:2,0,14
chr10	92870210	.	GAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGAAAGAGAGAGAA	G	593.17	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=0.889;DP=473;FS=5.255;HRun=0;HaplotypeScore=298.6731;InbreedingCoeff=0.5486;MQ=45.14;MQ0=51;MQRankSum=-3.229;QD=8.35;ReadPosRankSum=-0.457;VQSLOD=1.8047;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:4.89:0,5,41	0/0:8,0:7:12.04:0,12,1239	0/0:12,0:1:3.01:0,3,283	0/0:16,0:1:3.01:0,3,104	0/0:13,0:11:19.83:0,20,2942	0/0:18,0:17:9.47:0,9,950	0/0:16,0:14:9.30:0,9,354	0/0:13,0:11:21.03:0,21,1245	0/0:17,0:17:33.11:0,33,5488	0/0:29,0:28:69.23:0,69,9598	0/0:16,0:15:28.34:0,28,4219	0/0:17,4:18:3.01:0,3,40	1/1:9,6:13:1.18:327,1,0	./.	0/0:20,0:18:33.07:0,33,3267	0/0:27,0:26:51.65:0,52,8722	0/0:20,0:17:33.11:0,33,4460	1/1:6,10:16:2.99:330,3,0	0/0:19,0:18:36.12:0,36,3687	0/0:12,0:12:24.40:0,24,2877	0/0:16,0:11:21.07:0,21,3221	./.	0/0:9,0:6:0.47:0,0,1	1/1:26,0:23:2.22:7,2,0	1/1:5,9:13:2.98:38,3,0	0/0:21,0:21:57.20:0,57,7988	0/0:12,0:11:28.91:0,29,3309	0/0:15,0:12:32.59:0,33,4487
chr10	92872486	.	TG	T	4310.96	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=13.777;DP=634;FS=7.720;HRun=2;HaplotypeScore=130.9184;InbreedingCoeff=0.9648;MQ=59.39;MQ0=9;MQRankSum=-6.740;QD=17.24;ReadPosRankSum=-1.044;VQSLOD=4.0430;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:39:72.95:558,73,0	0/0:8,0:8:18.04:0,18,218	0/0:35,0:10:1.47:0,1,146	0/0:37,0:15:20.17:0,20,177	0/0:29,0:29:35.28:0,35,307	1/1:20,0:19:45.43:264,45,0	1/1:18,0:18:36.41:197,36,0	1/1:34,2:38:99:817,101,0	0/0:17,0:17:35.20:0,35,302	0/0:26,0:25:32.99:0,33,276	0/0:19,0:19:27.91:0,28,205	1/1:20,0:20:56.19:385,56,0	1/1:12,0:12:35.22:244,35,0	1/1:20,1:20:51.51:369,52,0	0/0:32,0:32:88.07:0,88,1070	0/0:15,0:15:24.99:0,25,154	0/0:37,0:37:94.16:0,94,1169	1/1:10,0:10:29.54:205,30,0	0/0:26,1:25:41.48:0,41,272	0/0:25,0:24:34.45:0,34,256	0/0:14,0:13:27.44:0,27,177	1/1:14,0:14:38.10:256,38,0	1/1:19,2:21:57.61:420,58,0	1/1:12,0:12:23.13:158,23,0	1/1:22,1:23:54.78:437,55,0	0/0:26,0:26:23.68:0,24,247	0/0:22,0:22:16.70:0,17,124	0/0:15,0:15:23.95:0,24,118
chr10	92872487	.	GGTTTTTTT	G	6013.59	PASS	AB=0.881;AC=19;AF=0.339;AN=56;BaseQRankSum=4.085;DP=631;FS=1.592;HRun=0;HaplotypeScore=200.7527;InbreedingCoeff=0.7582;MQ=59.44;MQ0=9;MQRankSum=-7.734;QD=28.91;ReadPosRankSum=-1.133;VQSLOD=4.0930;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:0,0:35:48.16:0,48,585	0/0:8,0:8:18.04:0,18,576	0/0:35,0:10:11.65:0,12,196	0/0:38,0:16:27.75:0,28,335	0/0:29,0:29:83.85:0,84,1795	0/1:19,0:19:65.04:65,0,632	0/1:18,0:18:12.93:13,0,454	0/1:21,0:38:30.25:30,0,717	0/0:17,0:17:48.10:0,48,1137	0/0:27,0:26:75.17:0,75,2056	0/0:19,0:19:57.17:0,57,1347	1/1:12,7:19:57.01:948,57,0	1/1:10,3:12:36.08:542,36,0	1/1:15,6:20:57.10:928,57,0	0/0:32,0:32:93.72:0,94,3108	0/0:14,0:14:36.12:0,36,1168	0/0:36,0:36:99:0,99,3040	1/1:10,0:10:30.07:356,30,0	0/0:28,0:26:77.97:0,78,1366	0/0:25,0:24:69.20:0,69,1885	0/0:16,0:15:32.44:0,32,746	1/1:6,8:14:41.16:686,41,0	1/1:15,6:21:62.89:782,63,0	1/1:8,3:11:24.01:387,24,0	1/1:13,10:23:69.21:1277,69,0	0/0:26,0:26:75.20:0,75,1675	0/0:22,0:22:45.13:0,45,1245	0/0:15,0:15:45.13:0,45,1454
chr10	92872488	.	GT	G	2521.35	PASS	AB=0.809;AC=26;AF=0.464;AN=56;BaseQRankSum=-0.277;DP=645;FS=0.000;HRun=14;HaplotypeScore=148.3781;InbreedingCoeff=0.1894;MQ=58.75;MQ0=10;MQRankSum=0.814;QD=5.80;ReadPosRankSum=2.842;VQSLOD=1.5639;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:35:26.84:114,27,0	0/0:4,0:8:14.81:0,15,117	0/0:34,0:10:1.76:0,2,24	0/1:38,1:16:3.14:19,0,3	0/1:8,18:29:2.01:249,0,2	0/0:20,0:19:30.04:0,30,133	0/0:18,0:18:27.44:0,27,122	1/1:38,0:38:47.02:216,47,0	0/1:10,6:16:25.18:99,0,25	0/1:7,20:26:21.37:298,0,21	1/1:6,11:19:11.85:209,12,0	0/1:21,0:21:11.62:12,0,27	0/1:14,0:13:2.09:2,0,28	0/1:21,0:20:4.01:4,0,53	0/0:28,0:31:62.26:0,62,644	0/1:3,11:14:13.73:150,0,14	0/0:35,1:37:66.99:0,67,737	0/0:12,0:12:5.07:0,5,21	0/1:14,15:27:8.16:225,0,8	1/1:7,16:24:20.97:271,21,0	0/1:6,8:13:37.43:64,0,37	0/1:18,0:18:11.53:12,0,21	0/0:23,0:23:6.72:0,7,57	0/1:13,0:13:3.52:8,0,4	0/0:26,0:26:2.84:0,3,55	1/1:7,17:25:49.53:333,50,0	1/1:5,15:22:9.02:188,9,0	1/1:2,12:15:12.89:225,13,0
chr10	92872495	.	T	TTG	1429.57	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=6.565;DP=642;FS=2.291;HRun=0;HaplotypeScore=159.2580;InbreedingCoeff=0.1850;MQ=55.32;MQ0=12;MQRankSum=-2.773;QD=7.52;ReadPosRankSum=-2.898;VQSLOD=2.7012;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:76.35:0,76,629	0/0:7,0:7:14.86:0,15,164	0/0:35,0:8:10.60:0,11,53	0/0:35,0:12:11.04:0,11,62	0/0:25,0:25:68.79:0,69,611	1/1:3,17:19:35.88:569,36,0	1/1:2,18:20:29.83:476,30,0	0/0:37,0:37:92.53:0,93,854	0/0:17,0:17:44.97:0,45,420	0/0:32,0:31:87.01:0,87,831	0/0:21,0:21:56.91:0,57,514	0/1:20,0:20:3.36:3,0,87	0/1:13,0:12:24.10:53,0,24	0/1:20,0:19:58.52:77,0,59	0/0:28,0:28:80.67:0,81,996	0/0:16,0:16:41.91:0,42,396	0/0:37,0:37:99:0,101,1292	0/1:11,0:11:32.30:37,0,32	0/0:26,0:24:70.99:0,71,636	0/0:24,0:23:66.03:0,66,607	0/0:14,0:12:23.99:0,24,241	0/1:20,0:20:71.16:98,0,71	0/1:23,0:23:54.50:55,0,79	0/1:14,0:14:2.89:3,0,33	0/1:29,0:29:13.40:217,0,13	0/0:23,0:23:60.05:0,60,545	0/0:22,0:22:42.03:0,42,395	0/0:16,0:16:45.01:0,45,418
chr10	92872507	.	TTTTGTTTTTTG	T	5160.72	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.108;DP=607;FS=19.945;HRun=0;HaplotypeScore=224.2148;InbreedingCoeff=0.9469;MQ=56.87;MQ0=10;MQRankSum=-9.672;QD=43.73;ReadPosRankSum=-0.992;VQSLOD=2.8738;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:88.98:0,89,2439	0/0:9,0:9:21.07:0,21,748	0/0:28,0:9:11.31:0,11,547	0/0:28,0:11:16.69:0,17,283	0/0:27,0:27:72.22:0,72,2628	0/0:18,0:17:36.59:0,37,1636	0/0:19,0:19:42.44:0,42,1340	0/0:36,0:36:95.53:0,96,2467	0/0:20,0:20:57.19:0,57,2000	0/0:32,0:31:81.21:0,81,2856	0/0:19,0:19:54.18:0,54,1977	1/1:8,6:14:40.95:805,41,0	1/1:5,3:8:0.65:343,1,0	1/1:9,6:14:39.02:769,39,0	0/0:26,0:26:75.23:0,75,3588	0/0:20,0:20:53.55:0,54,2112	0/0:36,0:36:77.96:0,78,3198	1/1:6,0:6:15.03:165,15,0	0/0:25,0:23:59.19:0,59,1811	0/0:27,0:26:72.24:0,72,2868	0/0:14,0:12:27.09:0,27,1107	1/1:12,8:20:60.10:1038,60,0	1/1:12,5:17:41.98:569,42,0	1/1:9,3:12:23.44:383,23,0	1/1:18,8:26:56.19:1090,56,0	0/0:24,0:24:63.19:0,63,2415	0/0:25,0:25:56.78:0,57,2153	0/0:17,0:17:48.16:0,48,1977
chr10	92872515	.	TTTG	T	4196.34	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=9.601;DP=604;FS=9.311;HRun=0;HaplotypeScore=136.8423;InbreedingCoeff=0.9850;MQ=61.72;MQ0=6;MQRankSum=-10.723;QD=34.97;ReadPosRankSum=3.186;VQSLOD=4.3459;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:87.18:0,87,1565	0/0:8,0:8:21.05:0,21,363	0/0:24,0:13:19.35:0,19,562	0/0:24,0:11:9.32:0,9,254	0/0:26,0:26:75.26:0,75,1496	0/0:21,0:20:45.13:0,45,821	0/0:18,0:18:42.06:0,42,711	0/0:36,0:36:83.94:0,84,1411	0/0:21,0:21:62.63:0,63,1170	0/0:29,0:29:67.95:0,68,1453	0/0:21,0:21:59.49:0,59,975	1/1:7,6:13:38.86:563,39,0	1/1:4,5:9:20.90:296,21,0	1/1:6,10:16:38.92:570,39,0	0/0:26,0:26:78.22:0,78,1482	0/0:22,0:22:57.13:0,57,1083	0/0:29,0:29:71.94:0,72,1299	1/1:0,7:7:15.05:248,15,0	0/0:26,0:25:59.98:0,60,1123	0/0:29,0:28:81.28:0,81,1578	0/0:15,0:13:30.10:0,30,613	1/1:8,12:20:58.83:815,59,0	1/1:6,12:18:38.15:577,38,0	1/1:3,10:13:21.07:327,21,0	1/1:11,13:24:56.89:800,57,0	0/0:22,0:22:63.20:0,63,1200	0/0:33,0:33:81.14:0,81,1430	0/0:16,0:16:45.06:0,45,820
chr10	92873836	.	G	GC	2898.64	PASS	AB=0.585;AC=20;AF=0.357;AN=56;BaseQRankSum=0.134;DP=516;FS=5.210;HRun=9;HaplotypeScore=68.0632;InbreedingCoeff=0.7799;MQ=77.98;MQ0=0;MQRankSum=-2.116;QD=16.10;ReadPosRankSum=-1.090;VQSLOD=3.6183;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:41:97.98:0,98,839	0/0:2,0:2:5.97:0,6,46	0/0:16,0:15:32.30:0,32,244	0/0:17,0:16:11.95:0,12,98	1/1:2,11:13:30.01:315,30,0	0/0:17,0:17:47.94:0,48,407	0/0:22,0:22:56.98:0,57,495	0/0:25,0:25:62.92:0,63,535	1/1:9,14:23:33.09:365,33,0	1/1:4,13:17:10.04:337,10,0	0/1:4,6:10:40.07:54,0,40	0/0:15,0:15:38.99:0,39,339	0/0:25,0:25:68.87:0,69,581	0/0:11,0:11:26.97:0,27,228	0/0:24,0:24:62.96:0,63,544	1/1:4,11:15:24.06:265,24,0	0/0:35,1:37:69.74:0,70,753	0/0:27,0:28:68.02:0,68,579	1/1:8,12:21:12.81:320,13,0	1/1:4,11:15:4.02:270,4,0	1/1:8,27:35:10.71:480,11,0	0/0:9,0:9:23.98:0,24,208	0/0:10,0:10:23.97:0,24,208	0/0:20,0:20:56.95:0,57,490	0/0:17,0:17:44.73:0,45,369	1/1:1,8:10:26.87:267,27,0	1/1:5,10:15:6.98:280,7,0	0/1:1,5:6:8.01:148,0,8
chr10	92876332	.	A	AT	5212.28	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=0.664;DP=547;FS=3.797;HRun=9;HaplotypeScore=89.8273;InbreedingCoeff=0.9601;MQ=67.99;MQ0=3;MQRankSum=1.182;QD=22.56;ReadPosRankSum=1.951;VQSLOD=5.5667;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:35.94:0,36,308	0/0:10,0:10:26.98:0,27,230	0/0:9,0:8:8.99:0,9,78	0/0:11,0:9:2.86:0,3,26	1/1:6,18:24:31.43:542,31,0	0/0:21,0:21:59.99:0,60,521	0/0:28,0:28:57.12:0,57,602	0/0:46,0:46:99:0,108,934	1/1:6,11:16:33.09:365,33,0	1/1:11,13:24:41.93:436,42,0	1/1:2,15:17:45.09:484,45,0	0/0:17,0:17:38.94:0,39,329	0/0:14,0:14:20.97:0,21,182	0/0:17,0:17:38.64:0,39,320	0/0:21,0:21:50.96:0,51,439	1/1:3,10:13:27.07:299,27,0	0/0:28,1:29:41.78:0,42,588	0/0:30,0:30:74.98:0,75,650	1/1:9,16:24:51.14:562,51,0	1/1:3,23:25:63.05:656,63,0	1/1:2,8:10:21.06:232,21,0	0/0:5,0:5:15:0,15,130	0/0:14,0:14:29.99:0,30,260	0/0:6,0:6:14.96:0,15,121	0/0:20,0:20:41.98:0,42,364	1/1:9,23:32:72.15:775,72,0	1/1:7,15:23:42.11:464,42,0	1/1:3,17:20:36.10:398,36,0
chr10	92877512	.	CCA	C	289.87	PASS	AB=0.912;AC=6;AF=0.120;AN=50;BaseQRankSum=-3.359;DP=641;FS=9.916;HRun=0;HaplotypeScore=125.5251;InbreedingCoeff=0.5147;MQ=58.36;MQ0=14;MQRankSum=2.089;QD=3.29;ReadPosRankSum=1.388;VQSLOD=1.8036;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:35.96:0,36,341	0/1:8,1:9:14.67:15,0,206	./.	./.	0/0:20,0:19:14.98:0,15,137	1/1:9,10:20:15.04:164,15,0	1/1:18,4:22:18.05:196,18,0	./.	0/0:23,0:22:32.95:0,33,289	0/0:25,0:25:32.87:0,33,255	0/0:15,0:15:17.98:0,18,168	0/0:20,0:19:34:0,34,275	0/0:19,0:19:26.97:0,27,227	0/0:26,0:26:23.82:0,24,187	0/0:23,0:22:30.10:0,30,442	0/0:25,0:25:44.88:0,45,371	0/1:33,3:36:44.06:44,0,580	0/0:10,0:10:5.99:0,6,49	0/0:20,0:19:26.98:0,27,252	0/0:26,0:25:29.90:0,30,233	0/0:39,0:40:38.93:0,39,339	0/0:13,0:13:3.47:0,3,25	0/0:20,0:18:5.99:0,6,49	0/0:30,0:30:17.48:0,17,148	0/0:16,0:16:16.44:0,16,124	0/0:26,0:26:39.33:0,39,310	0/0:25,0:25:32.96:0,33,308	0/0:15,0:15:20.96:0,21,201
chr10	92877547	.	C	CCACAT	2416.99	PASS	AB=0.545;AC=23;AF=0.411;AN=56;BaseQRankSum=11.033;DP=713;FS=16.415;HRun=0;HaplotypeScore=158.4527;InbreedingCoeff=-0.2677;MQ=57.31;MQ0=15;MQRankSum=-3.153;QD=4.50;ReadPosRankSum=8.437;VQSLOD=0.5576;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:43:20.41:20,0,222	0/0:14,0:14:39.13:0,39,801	0/0:23,0:10:30.10:0,30,630	0/0:21,0:8:24.08:0,24,484	0/1:5,0:22:3.38:3,0,103	0/0:18,0:17:6.24:0,6,142	0/0:20,0:20:31.91:0,32,425	0/0:23,0:20:54.13:0,54,910	0/1:7,0:24:12.80:13,0,173	0/1:4,0:28:80.73:81,0,230	0/1:5,0:21:40.98:41,0,113	0/1:3,0:35:4.82:560,0,5	0/1:2,1:26:27.56:412,0,28	1/1:2,1:19:23.57:404,24,0	0/0:20,0:19:57.18:0,57,1190	0/1:4,0:33:42.85:57,0,43	0/0:37,0:37:99:0,111,2111	0/1:2,0:13:41.13:103,0,41	0/1:3,0:26:74.90:75,0,222	0/1:4,0:27:33.67:34,0,107	0/1:11,0:46:54.43:54,0,160	0/1:4,0:17:41.85:51,0,42	1/1:1,0:21:4.63:96,5,0	0/1:4,0:33:17.95:284,0,18	1/1:4,1:21:0.97:227,1,0	0/1:2,0:27:41.81:42,0,137	0/1:4,0:25:21.79:22,0,141	0/1:4,0:18:3.59:4,0,168
chr10	92878872	.	GA	G	1785.52	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.992;DP=713;FS=0.540;HRun=2;HaplotypeScore=68.4240;InbreedingCoeff=0.9995;MQ=82.63;MQ0=0;MQRankSum=-2.265;QD=35.01;ReadPosRankSum=-0.747;VQSLOD=3.6812;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1727	0/0:12,0:12:33.10:0,33,474	0/0:23,0:23:69.16:0,69,950	0/0:22,0:22:61.44:0,61,872	0/0:24,0:24:72.24:0,72,1070	1/1:0,26:26:75.24:972,75,0	1/1:0,25:25:72.23:935,72,0	0/0:33,0:33:96.32:0,96,1420	0/0:32,0:32:93.31:0,93,1387	0/0:30,0:30:87.29:0,87,1274	0/0:11,0:11:33.04:0,33,467	0/0:27,0:27:81.27:0,81,1214	0/0:22,0:22:63.21:0,63,943	0/0:34,0:34:96.31:0,96,1415	0/0:34,0:34:99:0,102,1506	0/0:45,0:45:99:0,135,2003	0/0:38,0:38:99:0,114,1705	0/0:24,0:24:69.23:0,69,1027	0/0:18,0:18:54.18:0,54,793	0/0:14,0:14:36.09:0,36,499	0/0:43,0:43:99:0,129,1909	0/0:14,0:14:42.14:0,42,620	0/0:16,0:16:48.14:0,48,679	0/0:22,0:22:66.22:0,66,989	0/0:20,0:20:57.18:0,57,834	0/0:28,0:28:84.28:0,84,1259	0/0:25,0:25:75.24:0,75,1103	0/0:11,0:11:33.11:0,33,494
chr10	92879934	.	G	GCA	622.47	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.793;DP=622;FS=0.000;HRun=0;HaplotypeScore=103.6026;InbreedingCoeff=0.8247;MQ=68.61;MQ0=1;MQRankSum=-0.862;QD=23.05;ReadPosRankSum=-3.535;VQSLOD=3.2158;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,138,1731	0/0:12,0:12:21.07:0,21,272	0/0:9,0:9:12.85:0,13,103	0/0:9,0:9:2.87:0,3,68	0/0:22,0:22:62.92:0,63,734	0/0:24,0:23:60.11:0,60,727	0/0:37,0:37:84.13:0,84,1034	1/1:20,7:27:51.10:717,51,0	0/0:18,0:18:47.93:0,48,517	0/0:26,0:26:75.15:0,75,901	0/0:12,0:12:32.70:0,33,371	0/0:26,0:26:69:0,69,774	0/0:15,0:15:42:0,42,488	0/0:24,0:24:63.19:0,63,802	0/0:14,0:14:39.01:0,39,449	0/0:16,0:16:45.12:0,45,555	0/0:31,0:31:81.24:0,81,1027	0/0:35,0:35:99:0,105,1235	0/0:17,0:17:41.29:0,41,492	0/0:9,0:9:27.07:0,27,335	0/0:55,0:54:99:0,153,1842	0/0:17,0:17:48.08:0,48,588	0/0:11,0:11:27.08:0,27,340	0/0:34,0:33:84.17:0,84,1038	0/0:19,0:19:51.11:0,51,628	0/0:25,0:25:63.20:0,63,816	0/0:15,0:15:35.91:0,36,420	0/0:12,0:12:32.64:0,33,407
chr10	92879958	.	A	AC	661.38	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.108;DP=684;FS=0.000;HRun=0;HaplotypeScore=110.9581;InbreedingCoeff=0.9976;MQ=77.31;MQ0=1;MQRankSum=-2.245;QD=38.90;ReadPosRankSum=-2.563;VQSLOD=2.5050;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,172,2385	0/0:9,0:9:27.09:0,27,378	0/0:18,0:18:48.10:0,48,609	0/0:14,0:14:39.08:0,39,474	0/0:21,0:21:63.21:0,63,881	0/0:28,0:27:84.25:0,84,1138	0/0:36,0:36:99:0,105,1469	1/1:1,16:17:48.16:756,48,0	0/0:22,0:22:66.22:0,66,919	0/0:33,0:33:96.32:0,96,1325	0/0:18,0:18:51.17:0,51,713	0/0:33,0:33:96.32:0,96,1342	0/0:20,0:20:60.20:0,60,837	0/0:25,0:25:75.25:0,75,1049	0/0:16,0:16:45.12:0,45,594	0/0:20,0:20:57.18:0,57,780	0/0:28,0:28:81.27:0,81,1133	0/0:41,0:41:99:0,123,1702	0/0:20,0:20:54.16:0,54,733	0/0:13,0:13:39.13:0,39,544	0/0:54,0:53:99:0,157,2181	0/0:19,0:19:57.19:0,57,797	0/0:9,0:9:27.09:0,27,378	0/0:36,0:35:99:0,105,1433	0/0:23,0:23:69.22:0,69,949	0/0:27,0:27:78.26:0,78,1085	0/0:13,0:13:39.10:0,39,510	0/0:13,0:13:36.11:0,36,503
chr10	92880606	.	C	CGAGCTGCGAG	2288.17	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.783;DP=672;FS=0.824;HRun=0;HaplotypeScore=196.1645;InbreedingCoeff=0.9856;MQ=73.87;MQ0=0;MQRankSum=-6.852;QD=39.45;ReadPosRankSum=-2.680;VQSLOD=2.8735;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,7:24:27.09:1335,27,0	0/0:9,0:9:18.06:0,18,549	0/0:12,0:13:17.64:0,18,289	0/0:16,0:17:24.97:0,25,520	0/0:29,0:29:45.15:0,45,1330	0/0:16,0:16:33.09:0,33,896	0/0:24,0:24:48.11:0,48,1227	1/1:34,0:34:40.37:1074,40,0	0/0:20,0:20:51.16:0,51,1406	0/0:23,0:23:51.14:0,51,1425	0/0:23,0:23:45.15:0,45,1339	0/0:20,0:20:48.16:0,48,1463	0/0:25,0:25:66.16:0,66,1814	0/0:22,0:22:39.09:0,39,1009	0/0:29,0:29:63.20:0,63,1798	0/0:24,0:24:63.22:0,63,1734	0/0:32,0:31:90.31:0,90,2694	0/0:26,0:26:54.18:0,54,1627	0/0:31,0:31:42.13:0,42,1029	0/0:36,0:36:81.21:0,81,2329	0/0:31,0:31:72.21:0,72,1961	0/0:18,0:18:42.14:0,42,1262	0/0:23,0:23:45.15:0,45,1256	0/0:28,0:28:69.24:0,69,2081	0/0:29,0:29:66.23:0,66,1967	0/0:32,0:32:63.22:0,63,1710	0/0:13,0:13:18.02:0,18,481	0/0:21,0:21:60.21:0,60,1603
chr10	92880869	.	G	GCCGTTTCCC	4923.24	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.921;DP=661;FS=0.000;HRun=0;HaplotypeScore=181.4863;InbreedingCoeff=0.9993;MQ=86.74;MQ0=0;MQRankSum=-9.940;QD=91.17;ReadPosRankSum=-2.088;VQSLOD=4.2509;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,2885	0/0:15,0:15:42.12:0,42,1206	0/0:26,0:26:66.20:0,66,1939	0/0:19,0:19:48.11:0,48,1230	0/0:15,0:15:45.14:0,45,1264	1/1:4,11:20:42.14:1917,42,0	1/1:9,14:34:69.24:3006,69,0	0/0:21,0:21:63.17:0,63,1692	0/0:21,0:21:60.21:0,60,1892	0/0:17,0:17:51.18:0,51,1598	0/0:12,0:12:36.11:0,36,1024	0/0:31,0:31:77.39:0,77,2538	0/0:27,0:27:78.18:0,78,2112	0/0:19,0:19:51.17:0,51,1557	0/0:23,0:23:66.20:0,66,1949	0/0:38,0:38:99:0,111,3413	0/0:40,0:40:99:0,117,3552	0/0:31,0:31:81.28:0,81,2511	0/0:9,0:9:27.09:0,27,799	0/0:14,0:14:42.10:0,42,1032	0/0:42,0:41:99:0,123,3670	0/0:17,0:17:51.18:0,51,1568	0/0:16,0:16:45.15:0,45,1423	0/0:36,0:35:93.34:0,93,3163	0/0:16,0:16:48.15:0,48,1445	0/0:27,0:27:75.24:0,75,2134	0/0:24,0:24:69.22:0,69,2109	0/0:17,0:17:51.14:0,51,1533
chr10	92881206	.	A	AG	1048.06	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.301;DP=675;FS=3.360;HRun=6;HaplotypeScore=85.8601;InbreedingCoeff=0.9915;MQ=87.23;MQ0=0;MQRankSum=-2.887;QD=27.58;ReadPosRankSum=1.663;VQSLOD=4.2085;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,108,1102	0/0:14,0:14:39.09:0,39,398	0/0:23,0:23:54.51:0,55,530	0/0:23,0:23:54.05:0,54,527	0/0:21,0:21:54.12:0,54,550	1/1:2,18:20:51.16:641,51,0	1/1:3,15:18:42.13:528,42,0	0/0:36,0:36:99:0,102,1026	0/0:23,0:23:66.14:0,66,667	0/0:17,0:17:42.08:0,42,422	0/0:12,0:12:36.08:0,36,367	0/0:20,0:20:51.07:0,51,506	0/0:14,0:14:33.07:0,33,337	0/0:21,0:21:57.13:0,57,581	0/0:23,0:23:63.14:0,63,643	0/0:29,0:29:72.15:0,72,734	0/0:42,0:42:99:0,108,1095	0/0:32,0:32:78.15:0,78,788	0/0:20,0:20:57.10:0,57,573	0/0:26,0:26:66.13:0,66,666	0/0:57,0:57:99:0,165,1673	0/0:15,0:15:42.09:0,42,428	0/0:14,0:14:39.06:0,39,390	0/0:37,0:37:93.21:0,93,949	0/0:24,0:24:72.15:0,72,728	0/0:29,0:29:84.19:0,84,857	0/0:19,0:19:51.11:0,51,520	0/0:5,0:5:15.03:0,15,153
chr10	92882297	.	GGTGT	G	1701.68	PASS	AB=0.908;AC=18;AF=0.375;AN=48;BaseQRankSum=1.666;DP=597;FS=8.432;HRun=0;HaplotypeScore=101.1327;InbreedingCoeff=0.4704;MQ=68.16;MQ0=12;MQRankSum=1.324;QD=6.23;ReadPosRankSum=3.852;VQSLOD=1.3832;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:13.77:0,14,68	0/1:6,1:7:46.63:50,0,47	./.	./.	0/0:15,0:14:3.01:0,3,70	1/1:13,2:16:9.02:121,9,0	0/1:19,1:20:61.44:253,0,61	./.	0/0:21,0:22:23.79:0,24,331	0/0:16,0:16:8.85:0,9,105	0/0:16,0:16:3.01:0,3,68	0/1:13,1:15:33.42:41,0,33	1/1:14,2:17:2.31:153,2,0	1/1:26,1:29:20.94:244,21,0	0/0:19,0:18:18.06:0,18,422	0/0:24,0:24:27.06:0,27,494	1/1:16,13:30:9.61:378,10,0	1/1:17,2:20:19.96:217,20,0	0/0:23,0:22:11.97:0,12,204	0/0:8,0:8:8.71:0,9,99	0/1:54,3:57:4.94:5,0,533	0/0:11,0:11:0:0,0,0	./.	1/1:34,3:37:23.86:312,24,0	1/1:8,10:21:5.79:92,6,0	0/0:24,0:24:16.50:0,16,154	0/0:20,0:20:17.78:0,18,299	0/0:4,0:7:8.50:0,8,95
chr10	92882476	.	GA	G	1053.48	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.764;DP=592;FS=17.785;HRun=1;HaplotypeScore=90.3339;InbreedingCoeff=0.9915;MQ=85.71;MQ0=0;MQRankSum=-0.906;QD=31.92;ReadPosRankSum=-0.599;VQSLOD=1.9287;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:85.57:0,86,841	0/0:6,0:6:18.06:0,18,288	0/0:21,0:21:60.10:0,60,842	0/0:19,0:19:54.09:0,54,780	0/0:10,0:10:27.09:0,27,432	1/1:0,11:11:24.08:336,24,0	1/1:0,22:22:60.20:839,60,0	0/0:12,0:12:32.36:0,32,202	0/0:22,0:22:66.14:0,66,1002	0/0:16,0:16:48.16:0,48,746	0/0:12,0:12:33.09:0,33,495	0/0:22,0:22:62.95:0,63,410	0/0:28,0:28:79.98:0,80,552	0/0:22,0:22:40.44:0,40,423	0/0:28,0:28:84.29:0,84,1336	0/0:24,0:24:72.23:0,72,1123	0/0:36,0:36:99:0,108,1723	0/0:24,0:24:71:0,71,471	0/0:18,0:18:54.15:0,54,829	0/0:12,0:12:33.11:0,33,522	0/0:40,0:40:99:0,117,1839	0/0:17,0:17:47.30:0,47,328	0/0:23,0:23:65.23:0,65,456	0/0:36,0:36:99:0,102,681	0/0:18,0:18:29.40:0,29,316	0/0:25,0:25:75.26:0,75,1197	0/0:14,0:14:42.14:0,42,664	0/0:7,0:7:21.07:0,21,336
chr10	92884464	.	TG	T	1302.56	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.260;DP=554;FS=0.717;HRun=2;HaplotypeScore=59.8242;InbreedingCoeff=0.9411;MQ=84.99;MQ0=0;MQRankSum=-4.737;QD=32.56;ReadPosRankSum=1.845;VQSLOD=3.5643;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:40:99:1397,108,0	0/0:3,0:3:9.03:0,9,135	0/0:15,0:14:32.56:0,33,419	0/0:34,0:34:84.24:0,84,1181	0/0:18,0:18:54.14:0,54,747	0/0:25,0:25:75.24:0,75,1099	0/0:31,0:30:90.26:0,90,1308	0/0:15,0:15:42.14:0,42,625	0/0:17,0:17:51.17:0,51,760	0/0:25,0:25:75.24:0,75,1067	0/0:14,0:14:42.13:0,42,609	0/0:21,0:21:63.21:0,63,935	0/0:18,0:18:51.17:0,51,764	0/0:22,0:22:63.21:0,63,927	0/0:25,0:25:75.25:0,75,1123	0/0:22,0:22:66.19:0,66,963	0/0:24,0:24:69.23:0,69,1032	0/0:21,0:21:63.21:0,63,941	0/0:10,0:10:27.09:0,27,402	0/0:12,0:12:36.12:0,36,540	0/0:45,0:45:99:0,132,1957	0/0:9,0:9:27.07:0,27,384	0/0:17,0:17:48.16:0,48,715	0/0:19,0:19:54.18:0,54,807	0/0:15,0:15:42.14:0,42,628	0/0:13,0:13:39.12:0,39,567	0/0:16,0:16:48.16:0,48,715	0/0:8,0:8:24.08:0,24,360
chr10	92887881	.	T	TC	553.85	PASS	AB=0.809;AC=13;AF=0.232;AN=56;BaseQRankSum=0.146;DP=412;FS=3.613;HRun=10;HaplotypeScore=55.4642;InbreedingCoeff=0.2008;MQ=85.38;MQ0=0;MQRankSum=-1.857;QD=4.62;ReadPosRankSum=-1.712;VQSLOD=0.2364;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:17:3.44:20,3,0	0/0:6,0:6:11.92:0,12,91	0/0:28,0:28:27.69:0,28,261	0/0:17,0:17:15.54:0,16,123	0/0:14,0:14:11.90:0,12,91	0/0:14,0:16:29.83:0,30,231	0/1:13,5:18:92:130,0,92	0/0:10,0:10:8.98:0,9,74	0/0:23,0:23:34.36:0,34,256	0/1:13,0:13:4.97:5,0,81	0/0:2,0:4:5.02:0,5,30	0/1:7,0:7:37.75:52,0,38	0/1:7,10:17:4.94:142,0,5	0/1:4,7:11:16.18:54,0,16	0/0:20,0:23:44.08:0,44,321	0/0:23,0:25:50.79:0,51,385	0/0:26,0:28:58.65:0,59,457	0/1:8,4:12:6.12:140,0,6	0/0:15,0:16:21.47:0,21,158	0/0:6,0:6:2.99:0,3,25	0/0:34,0:36:57.05:0,57,441	0/0:6,0:6:2.26:0,2,43	0/1:7,1:8:8.08:77,0,8	1/1:5,4:9:5.93:49,6,0	1/1:7,1:8:3.01:32,3,0	0/0:13,0:13:11.95:0,12,98	0/0:13,0:13:32:0,32,252	0/0:7,0:7:14.97:0,15,123
chr10	92888698	.	TACAC	T	4144.31	PASS	AB=0.789;AC=24;AF=0.429;AN=56;BaseQRankSum=1.808;DP=553;FS=12.058;HRun=0;HaplotypeScore=112.6149;InbreedingCoeff=0.5382;MQ=60.79;MQ0=15;MQRankSum=-0.524;QD=14.91;ReadPosRankSum=0.784;VQSLOD=2.6929;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:6.91:0,7,97	0/0:7,0:7:18.06:0,18,412	0/0:41,0:21:14.97:0,15,246	0/0:43,0:25:26.26:0,26,425	1/1:3,8:10:3.01:50,3,0	0/0:8,1:23:16.97:0,17,100	0/1:16,1:22:23.54:24,0,75	1/1:20,19:39:2.96:690,3,0	0/1:10,15:25:1.50:183,0,1	1/1:8,19:25:39.57:712,40,0	1/1:0,8:9:15.05:247,15,0	0/0:19,0:15:6.48:0,6,78	0/0:10,0:10:5.89:0,6,39	0/0:12,0:11:3.01:0,3,49	0/0:31,0:33:74.90:0,75,1559	0/1:10,14:24:1.54:321,0,2	0/0:25,0:25:55.20:0,55,993	0/0:7,0:7:14.98:0,15,161	1/1:2,8:10:24.06:371,24,0	1/1:5,11:16:3.30:279,3,0	0/1:14,11:23:2.89:276,0,3	0/0:15,0:14:2.98:0,3,48	0/1:8,0:8:0:0,0,0	0/1:11,0:11:0.27:0,0,0	0/0:10,0:10:2.98:0,3,50	1/1:15,6:22:9.84:551,10,0	1/1:9,3:11:18.06:292,18,0	1/1:4,12:16:9.03:148,9,0
chr10	92888732	.	AAGAGAG	A	288.78	PASS	AB=0.875;AC=12;AF=0.231;AN=52;BaseQRankSum=0.337;DP=472;FS=14.753;HRun=0;HaplotypeScore=133.8100;InbreedingCoeff=0.5633;MQ=45.69;MQ0=16;MQRankSum=-2.698;QD=3.66;ReadPosRankSum=-2.888;VQSLOD=0.8177;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:17:0.02:0,0,0	0/0:9,0:9:5.85:0,6,153	./.	./.	0/0:9,0:8:2.99:0,3,24	0/0:21,0:21:14.76:0,15,289	0/0:17,0:16:12.04:0,12,217	0/0:37,0:35:10.50:0,10,119	0/0:24,0:24:13.59:0,14,259	0/0:19,0:20:24.97:0,25,458	0/0:12,0:11:0:0,0,0	1/1:15,2:14:16.96:178,17,0	0/1:4,2:6:11.51:53,0,12	1/1:3,3:5:2.97:20,3,0	0/0:27,0:36:4.37:0,4,108	0/0:28,0:29:38.14:0,38,815	0/0:23,0:23:33.11:0,33,681	0/0:3,0:3:0:0,0,0	0/0:20,0:18:14.31:0,14,169	0/0:13,0:13:6.02:0,6,119	0/0:20,0:19:14.95:0,15,285	1/1:9,1:9:8.78:88,9,0	0/0:5,0:4:0:0,0,0	1/1:8,3:11:2.53:20,3,0	1/1:2,6:8:8.52:71,9,0	0/0:24,0:25:43.08:0,43,854	0/0:12,0:10:15.05:0,15,263	0/0:13,0:13:5.92:0,6,42
chr10	92888981	.	A	AC	451.38	PASS	AB=0.952;AC=8;AF=0.143;AN=56;BaseQRankSum=1.800;DP=674;FS=8.587;HRun=0;HaplotypeScore=117.4877;InbreedingCoeff=0.1113;MQ=39.90;MQ0=86;MQRankSum=-1.409;QD=3.47;ReadPosRankSum=3.308;VQSLOD=2.4126;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:21:25.50:0,25,236	0/0:9,0:9:24.22:0,24,174	0/0:51,0:5:2.21:0,2,60	0/0:54,0:11:6.21:0,6,88	0/0:30,0:28:54.22:0,54,346	0/0:19,0:16:41.87:0,42,347	0/0:12,0:9:23.90:0,24,192	0/0:35,0:30:50.57:0,51,417	0/0:15,0:14:29.09:0,29,189	0/0:39,0:28:27.40:0,27,342	0/0:24,0:21:39.30:0,39,256	0/1:26,0:24:54.09:118,0,54	0/1:15,1:14:17.45:74,0,17	0/1:17,1:14:35.64:36,0,55	0/0:6,0:5:14.78:0,15,114	0/0:14,0:12:32.79:0,33,249	0/0:30,0:26:28.77:0,29,199	0/0:19,0:15:23.68:0,24,83	0/0:28,0:24:61.99:0,62,436	0/0:31,0:26:47.50:0,47,324	0/0:10,0:2:5.96:0,6,51	1/1:12,3:14:14.57:113,15,0	0/1:20,3:21:14.37:108,0,14	0/1:16,0:13:11.11:78,0,11	0/1:15,1:13:13.37:65,0,13	0/0:32,0:27:71.24:0,71,490	0/0:32,0:28:49.98:0,50,378	0/0:27,0:16:32.20:0,32,232
chr10	92889005	.	AC	A	3200.39	PASS	AB=0.927;AC=38;AF=0.679;AN=56;BaseQRankSum=-2.551;DP=700;FS=10.535;HRun=1;HaplotypeScore=120.3327;InbreedingCoeff=0.3684;MQ=35.06;MQ0=108;MQRankSum=1.048;QD=5.30;ReadPosRankSum=-0.557;VQSLOD=-0.6386;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:20:46.78:0,47,345	1/1:8,0:8:23.73:166,24,0	1/1:34,5:6:7.65:41,8,0	0/1:46,9:11:0.60:60,0,1	1/1:30,0:27:26.83:234,27,0	1/1:17,0:12:32.01:225,32,0	1/1:13,0:10:17.02:175,17,0	1/1:30,0:21:25.28:250,25,0	1/1:14,0:12:15.21:126,15,0	1/1:44,0:32:16.70:217,17,0	1/1:26,1:22:27.25:185,27,0	0/1:23,0:21:52.49:69,0,52	0/0:17,0:15:12.34:0,12,65	0/1:18,0:14:8.94:9,0,78	0/1:6,0:5:10.18:39,0,10	1/1:18,0:16:27.81:156,28,0	0/1:12,21:28:9.73:10,0,58	0/1:19,0:13:39.55:40,0,64	1/1:34,1:25:35.17:322,35,0	1/1:34,1:29:19.84:190,20,0	0/0:9,0:2:2.88:0,3,15	0/1:16,1:15:12.90:13,0,16	0/0:21,0:18:30.50:0,30,135	0/1:14,0:10:4.14:19,0,4	0/0:23,0:19:18.18:0,18,71	1/1:39,0:32:26.49:316,26,0	1/1:34,0:29:35.71:208,36,0	1/1:35,0:24:24.10:313,24,0
chr10	92889006	.	CAAAACAAAAAAAAA	C	4071.82	PASS	AB=0.983;AC=24;AF=0.429;AN=56;BaseQRankSum=-9.449;DP=707;FS=28.671;HRun=0;HaplotypeScore=226.1822;InbreedingCoeff=-0.5620;MQ=36.43;MQ0=106;MQRankSum=4.161;QD=6.65;ReadPosRankSum=-11.312;VQSLOD=-0.5651;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:20:48.16:0,48,1567	0/0:8,0:8:24.02:0,24,649	0/1:39,0:6:8.22:9,0,8	0/1:55,0:12:5.85:6,0,96	0/1:29,0:26:99:153,0,549	1/1:16,1:12:33.05:694,33,0	0/1:12,0:9:99:479,0,126	0/1:30,0:21:99:228,0,238	0/1:15,0:13:6.26:6,0,896	0/1:43,0:31:99:216,0,1077	0/1:27,0:22:99:124,0,1033	0/1:24,0:22:99:176,0,688	0/1:16,0:15:99:123,0,595	0/1:20,0:16:99:101,0,918	0/0:6,0:5:15.05:0,15,523	0/1:19,0:17:99:166,0,549	0/0:34,0:29:11.17:0,11,436	0/1:19,0:14:99:232,0,242	0/1:35,0:26:99:298,0,552	0/1:36,0:30:99:155,0,1151	0/1:9,0:2:10.50:14,0,11	0/1:8,9:15:28.41:28,0,615	0/1:22,0:19:19.10:19,0,1604	0/1:15,0:11:99:133,0,229	0/0:21,0:18:21.07:0,21,783	0/1:40,0:33:99:279,0,1330	0/1:34,0:29:76.39:76,0,1021	0/1:35,0:24:99:356,0,643
chr10	92889011	.	CA	C	1159.76	PASS	AB=0.833;AC=19;AF=0.339;AN=56;BaseQRankSum=2.503;DP=686;FS=10.245;HRun=18;HaplotypeScore=131.3841;InbreedingCoeff=0.4759;MQ=38.81;MQ0=95;MQRankSum=-1.354;QD=3.45;ReadPosRankSum=0.622;VQSLOD=-0.3933;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:20:48.81:0,49,248	0/0:9,0:9:7.09:0,7,37	0/0:39,0:6:6.75:0,7,22	0/0:49,1:13:12.43:0,12,68	1/1:20,8:25:16.14:113,16,0	0/0:17,0:12:0.89:0,1,11	0/0:12,0:9:3.51:0,4,19	0/1:24,5:21:17.75:62,0,18	0/1:14,1:13:27:49,0,27	1/1:29,12:30:16.59:156,17,0	1/1:17,8:21:8.40:96,8,0	0/0:25,0:23:29.99:0,30,141	0/0:16,0:14:18.97:0,19,92	0/0:20,0:16:34.75:0,35,197	0/1:8,1:8:0.71:1,0,67	1/1:8,11:17:25.63:135,26,0	0/0:31,0:27:12.89:0,13,82	0/0:19,0:14:12.50:0,13,54	1/1:16,15:23:27.88:171,28,0	0/1:25,7:26:21.64:110,0,22	0/0:9,0:2:0.47:0,0,1	0/0:17,0:15:10.99:0,11,59	0/0:23,0:20:31.76:0,32,179	0/0:14,0:11:10.70:0,11,43	0/0:23,0:20:16.70:0,17,78	1/1:20,18:31:20.70:227,21,0	0/1:16,18:30:12.23:101,0,12	1/1:28,7:25:1.63:119,2,0
chr10	92889020	.	A	AAAAAC	4424.39	PASS	AB=0.993;AC=29;AF=0.518;AN=56;BaseQRankSum=-7.489;DP=665;FS=13.419;HRun=0;HaplotypeScore=162.5321;InbreedingCoeff=0.0803;MQ=45.33;MQ0=64;MQRankSum=-0.124;QD=9.41;ReadPosRankSum=-2.131;VQSLOD=3.0069;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:24:31.67:0,32,331	0/0:12,0:11:24.80:0,25,226	0/0:43,0:10:10.68:0,11,66	0/0:45,0:15:20.53:0,21,182	0/1:30,0:27:22.41:134,0,22	0/1:19,0:14:3.14:322,0,3	1/1:12,0:9:5.89:197,6,0	0/1:27,0:19:66.50:180,0,67	0/1:15,0:14:39.36:72,0,39	0/1:35,0:28:95.98:96,0,111	0/1:25,0:22:37.74:38,0,51	1/1:21,0:19:38.41:493,38,0	1/1:13,0:13:29.78:415,30,0	1/1:20,0:19:26.95:492,27,0	0/0:8,0:8:23.38:0,23,220	0/1:18,0:17:11.53:12,0,77	0/0:29,0:26:13.24:0,13,147	1/1:14,0:11:20.81:281,21,0	0/1:29,0:24:46.11:172,0,46	0/0:29,0:25:11.75:0,12,112	1/1:12,0:7:2.44:94,2,0	1/1:16,0:15:11.61:235,12,0	0/1:17,0:17:1.79:351,0,2	0/1:16,0:13:5.35:221,0,5	1/1:7,14:21:17.90:339,18,0	0/1:39,0:34:86.59:111,0,87	0/1:33,0:30:57.21:57,0,67	0/1:33,0:27:60.17:114,0,60
chr10	92889118	.	CAT	C	278.40	PASS	AB=0.960;AC=3;AF=0.054;AN=56;BaseQRankSum=1.338;DP=642;FS=30.886;HRun=0;HaplotypeScore=128.8075;InbreedingCoeff=0.5563;MQ=59.62;MQ0=19;MQRankSum=-0.150;QD=4.35;ReadPosRankSum=0.701;VQSLOD=1.4476;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,38:40:27.01:358,27,0	0/0:8,0:8:21:0,21,240	0/0:34,0:13:32.07:0,32,350	0/0:37,0:20:45.90:0,46,514	0/0:15,0:15:36.27:0,36,241	0/0:19,0:18:37.42:0,37,253	0/0:17,0:17:9.87:0,10,153	0/0:23,0:22:52.36:0,52,406	0/0:31,0:31:73.29:0,73,492	0/0:20,0:20:48.91:0,49,350	0/0:19,0:19:25.41:0,25,251	0/0:32,0:30:34.38:0,34,227	0/0:26,0:26:30.57:0,31,185	0/0:24,0:23:21.57:0,22,125	0/0:22,0:22:57.11:0,57,973	0/0:19,0:18:36.73:0,37,224	0/1:23,1:24:25.38:25,0,523	0/0:8,0:7:8.79:0,9,58	0/0:16,0:16:35.46:0,35,247	0/0:24,0:24:52.73:0,53,339	0/0:40,0:40:50.97:0,51,333	0/0:22,0:22:38.74:0,39,259	0/0:18,0:16:17.40:0,17,99	0/0:26,0:24:8.22:0,8,55	0/0:18,0:17:32.63:0,33,214	0/0:23,0:23:55.66:0,56,409	0/0:16,0:16:26.99:0,27,136	0/0:21,0:20:13.38:0,13,226
chr10	92889120	.	TACAC	T	5782.48	PASS	AB=0.781;AC=44;AF=0.815;AN=54;BaseQRankSum=5.238;DP=650;FS=2.176;HRun=0;HaplotypeScore=130.8585;InbreedingCoeff=0.7054;MQ=59.48;MQ0=19;MQRankSum=-2.694;QD=11.56;ReadPosRankSum=1.854;VQSLOD=4.4828;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:3.04:0,3,231	0/0:10,0:10:12.03:0,12,217	./.	0/0:39,0:20:9.03:0,9,122	1/1:9,5:14:15.05:230,15,0	1/1:13,6:18:12.04:191,12,0	1/1:9,8:17:21.07:333,21,0	1/1:16,6:21:17.05:180,17,0	1/1:17,14:32:33.03:504,33,0	1/1:17,3:20:3.12:332,3,0	1/1:13,6:19:18.06:271,18,0	1/1:10,0:29:33.04:308,33,0	1/1:7,0:26:29.69:279,30,0	1/1:6,0:24:30.03:280,30,0	0/0:22,0:22:53.85:0,54,1124	1/1:8,11:18:21.07:333,21,0	0/1:21,0:25:0.50:0,0,623	1/1:4,0:7:6.01:56,6,0	1/1:11,1:13:12.03:170,12,0	1/1:13,13:26:30.01:402,30,0	1/1:19,20:40:20.64:294,21,0	1/1:7,0:22:21.02:196,21,0	1/1:7,0:16:18.02:168,18,0	1/1:13,0:25:9.01:84,9,0	1/1:9,0:18:21.02:196,21,0	1/1:11,11:22:29.43:395,29,0	1/1:4,10:16:23.61:340,24,0	0/1:12,6:20:1.03:242,0,1
chr10	92890381	.	AG	A	994.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.770;DP=736;FS=1.443;HRun=5;HaplotypeScore=71.0061;InbreedingCoeff=0.9997;MQ=75.28;MQ0=0;MQRankSum=-4.503;QD=26.87;ReadPosRankSum=1.179;VQSLOD=3.5933;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,33:37:96.27:1089,96,0	0/0:21,0:21:57.19:0,57,780	0/0:13,0:13:36.12:0,36,480	0/0:18,0:18:39.11:0,39,488	0/0:31,0:31:90.27:0,90,1197	0/0:25,0:25:72.24:0,72,984	0/0:34,0:34:93.29:0,93,1249	0/0:40,0:40:99:0,105,1431	0/0:21,0:21:60.19:0,60,805	0/0:39,0:39:99:0,99,1340	0/0:15,0:15:39.12:0,39,517	0/0:27,0:27:81.24:0,81,1051	0/0:26,0:26:76.80:0,77,1027	0/0:25,0:25:72.23:0,72,959	0/0:30,0:30:84.27:0,84,1132	0/0:17,0:17:51.16:0,51,681	0/0:30,0:30:81.25:0,81,1091	0/0:23,0:23:69.16:0,69,889	0/0:24,0:24:63.21:0,63,856	0/0:23,0:23:60.19:0,60,804	0/0:47,0:47:99:0,126,1700	0/0:27,0:27:75.24:0,75,1006	0/0:19,0:19:50.86:0,51,622	0/0:24,0:24:72.22:0,72,953	0/0:17,0:17:45.15:0,45,614	0/0:28,0:28:75.25:0,75,1026	0/0:29,0:28:81.27:0,81,1106	0/0:26,0:26:72.21:0,72,962
chr10	92891859	.	A	AC	571.45	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.421;DP=481;FS=1.924;HRun=7;HaplotypeScore=100.2498;InbreedingCoeff=0.9159;MQ=72.67;MQ0=0;MQRankSum=-1.674;QD=16.81;ReadPosRankSum=-0.834;VQSLOD=3.2691;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:20,14:34:57.15:666,57,0	0/0:8,0:8:15.02:0,15,145	0/0:20,0:19:42.62:0,43,382	0/0:21,0:20:26.79:0,27,248	0/0:10,0:10:24.04:0,24,232	0/0:18,0:18:36.01:0,36,333	0/0:27,0:26:63.07:0,63,598	0/0:15,1:16:30.02:0,30,284	0/0:10,0:10:21.03:0,21,203	0/0:12,0:13:29.08:0,29,267	0/0:7,0:7:18.02:0,18,169	0/0:29,0:29:66.08:0,66,636	0/0:12,0:12:24.03:0,24,231	0/0:17,0:17:45.06:0,45,428	0/0:14,0:14:39.06:0,39,376	0/0:11,0:11:24.02:0,24,226	0/0:26,0:26:54.08:0,54,521	0/0:23,0:23:51.07:0,51,492	0/0:10,0:10:15.02:0,15,144	0/0:6,0:6:15.02:0,15,145	0/0:36,0:36:63.10:0,63,608	0/0:11,0:11:23.96:0,24,216	0/0:9,0:9:15.02:0,15,144	0/0:23,0:23:51.05:0,51,485	0/0:16,0:16:27.04:0,27,260	0/0:20,0:20:39.05:0,39,376	0/0:24,0:24:57.09:0,57,550	0/0:10,0:10:21.03:0,21,203
chr10	92891986	.	AT	A	5860.55	PASS	AB=0.846;AC=27;AF=0.482;AN=56;BaseQRankSum=-3.705;DP=579;FS=5.169;HRun=10;HaplotypeScore=126.3395;InbreedingCoeff=0.8950;MQ=65.31;MQ0=0;MQRankSum=-1.888;QD=19.93;ReadPosRankSum=-0.389;VQSLOD=3.7913;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,52:54:99:1280,130,0	0/0:10,0:10:27.04:0,27,286	0/1:9,2:11:14.05:14,0,89	0/0:4,0:5:4.63:0,5,39	1/1:3,10:13:26.98:234,27,0	0/0:17,0:18:38.87:0,39,387	0/0:25,2:27:14.07:0,14,612	1/1:2,21:23:59.95:515,60,0	1/1:2,16:18:47.97:417,48,0	1/1:7,23:30:38.79:566,39,0	1/1:5,9:14:32.95:282,33,0	0/0:25,0:25:59.07:0,59,385	0/0:22,0:22:59.09:0,59,383	0/0:21,0:21:50.24:0,50,330	0/0:20,1:22:24.92:0,25,486	1/1:4,16:20:44.97:391,45,0	0/0:29,0:31:74.73:0,75,776	0/0:18,0:18:50.04:0,50,310	1/1:5,15:20:44.98:391,45,0	1/1:2,13:15:35.96:312,36,0	1/1:4,14:18:32.95:283,33,0	0/0:28,0:28:64.95:0,65,430	0/0:14,0:14:26.54:0,27,169	0/0:24,0:24:50.11:0,50,315	0/0:20,0:20:44.23:0,44,286	1/1:3,23:27:71.01:604,71,0	1/1:0,24:24:59.97:521,60,0	1/1:3,4:7:5.98:52,6,0
chr10	92893250	.	AAAC	A	6204.02	PASS	AB=0.980;AC=26;AF=0.464;AN=56;BaseQRankSum=5.176;DP=630;FS=4.688;HRun=0;HaplotypeScore=121.2896;InbreedingCoeff=0.8350;MQ=56.11;MQ0=0;MQRankSum=3.009;QD=19.09;ReadPosRankSum=3.224;VQSLOD=4.7177;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:42:33.93:34,0,750	0/0:9,0:9:27.09:0,27,527	0/0:16,0:11:5.81:0,6,72	0/1:23,1:22:9.05:9,0,423	1/1:6,17:23:17.96:253,18,0	0/0:14,0:14:36.11:0,36,660	0/0:38,0:38:93.28:0,93,1785	1/1:12,13:25:39.12:529,39,0	1/1:9,14:23:42.14:590,42,0	1/1:5,15:20:42.14:575,42,0	1/1:0,9:9:24.47:293,24,0	0/0:15,0:24:21.05:0,21,250	0/0:10,0:25:24.08:0,24,320	0/0:14,0:26:21.04:0,21,245	0/0:34,0:34:87.29:0,87,1618	1/1:4,25:29:51.17:716,51,0	0/0:26,0:26:69.23:0,69,1333	0/0:23,0:23:40.21:0,40,476	1/1:9,11:19:26.99:318,27,0	1/1:4,5:9:12:146,12,0	1/1:11,32:43:69.23:970,69,0	0/0:16,0:16:36.10:0,36,430	0/0:9,0:9:14.06:0,14,130	0/0:19,0:31:28.25:0,28,308	0/0:14,0:14:36.05:0,36,465	1/1:4,26:30:72.22:972,72,0	1/1:1,19:19:44.29:631,44,0	1/1:3,5:8:12.04:169,12,0
chr10	92893406	.	AG	A	1451.63	PASS	AB=0.817;AC=20;AF=0.357;AN=56;BaseQRankSum=16.165;DP=581;FS=2.880;HRun=4;HaplotypeScore=143.3690;InbreedingCoeff=-0.5855;MQ=42.51;MQ0=0;MQRankSum=-10.107;QD=3.18;ReadPosRankSum=6.800;VQSLOD=-0.2220;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:45.03:0,45,562	0/1:11,5:15:99:158,0,135	0/0:14,0:10:21.01:0,21,236	0/0:6,0:4:7.74:0,8,88	0/1:26,12:38:99:166,0,329	0/1:11,6:17:99:154,0,173	0/1:22,4:26:43.72:44,0,478	0/0:20,1:21:0.78:0,1,344	0/1:14,6:20:92.59:93,0,365	0/1:30,5:35:61.09:61,0,911	0/1:13,6:19:70.91:71,0,148	0/1:12,5:17:87.35:87,0,410	0/1:11,3:14:55.23:55,0,266	0/1:10,5:15:74.69:75,0,285	0/1:25,9:34:99:145,0,530	0/1:26,6:32:99:137,0,500	0/0:13,1:14:8.08:0,8,369	0/0:9,1:10:8.74:0,9,240	0/1:7,1:8:10.41:10,0,268	0/1:19,5:24:44.75:45,0,254	0/0:13,0:13:30.10:0,30,401	0/1:20,5:25:65.36:65,0,394	0/1:15,4:19:39.31:39,0,410	0/0:25,0:25:28.73:0,29,391	0/1:27,3:30:56.50:56,0,738	0/1:29,7:35:91.53:92,0,934	0/1:19,5:23:44.43:44,0,366	0/1:7,1:8:9.66:10,0,247
chr10	92893426	.	A	AG	242.85	PASS	AC=22;AF=1.000;AN=22;DP=31;FS=0.000;HRun=1;HaplotypeScore=8.6947;InbreedingCoeff=0.0143;MQ=41.93;MQ0=0;QD=10.12;VQSLOD=1.1653;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:1.25:3,1,0	1/1:0,1:1:2.04:6,2,0	./.	./.	./.	./.	1/1:2,2:4:5.91:38,6,0	./.	./.	1/1:1,0:1:3:27,3,0	./.	./.	./.	./.	1/1:3,0:3:5.99:48,6,0	1/1:1,1:2:5.90:37,6,0	1/1:2,0:2:2.98:22,3,0	./.	./.	./.	1/1:4,0:4:8.92:62,9,0	1/1:1,0:1:2.99:24,3,0	1/1:1,0:1:2.99:24,3,0	./.	./.	1/1:0,1:1:2.98:22,3,0	./.	./.
chr10	92893525	.	GC	G	6727.75	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=0.405;DP=372;FS=12.936;HRun=7;HaplotypeScore=89.3969;InbreedingCoeff=0.9483;MQ=63.90;MQ0=1;MQRankSum=-4.278;QD=24.55;ReadPosRankSum=0.202;VQSLOD=4.0103;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:54.12:545,54,0	0/0:7,0:7:18.06:0,18,226	0/0:6,0:7:21.01:0,21,240	0/0:9,0:9:14.98:0,15,160	1/1:2,8:10:6.47:62,6,0	0/0:19,0:19:54.17:0,54,678	0/0:22,0:22:54.17:0,54,665	1/1:5,12:16:33.07:336,33,0	1/1:1,12:13:36.08:366,36,0	1/1:0,19:19:54.12:550,54,0	1/1:1,8:9:18.04:182,18,0	1/1:0,19:19:57.13:581,57,0	1/1:2,9:11:27.06:275,27,0	1/1:1,10:11:30.07:305,30,0	0/0:14,0:14:33.11:0,33,412	1/1:1,16:17:48.10:488,48,0	0/0:20,0:20:60.11:0,60,719	1/1:0,4:4:12.03:122,12,0	1/1:1,7:8:21.04:208,21,0	1/1:0,10:10:27.06:272,27,0	1/1:4,18:21:30.05:306,30,0	1/1:1,9:10:27.06:275,27,0	1/1:1,3:4:9.02:91,9,0	1/1:0,16:16:33.07:336,33,0	1/1:2,13:15:30.05:299,30,0	1/1:0,18:18:54.12:548,54,0	1/1:1,17:18:48.10:488,48,0	1/1:0,3:3:9.02:92,9,0
chr10	92895685	.	TGG	T	4584	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=19.234;DP=768;FS=0.313;HRun=2;HaplotypeScore=165.4986;InbreedingCoeff=0.9998;MQ=76.98;MQ0=0;MQRankSum=-18.798;QD=24.91;ReadPosRankSum=4.485;VQSLOD=3.8905;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,115,2262	0/0:12,0:12:36.12:0,36,731	0/0:21,0:21:63.21:0,63,1179	0/0:23,0:23:57.04:0,57,972	0/0:21,0:21:63.20:0,63,1227	0/0:19,0:19:57.20:0,57,1158	0/0:35,0:35:99:0,105,2119	0/0:35,0:35:99:0,105,2083	0/0:24,0:24:69.24:0,69,1402	0/0:21,0:21:63.22:0,63,1280	0/0:16,0:16:48.14:0,48,889	1/1:1,31:32:96.08:887,96,0	1/1:1,19:20:59.78:540,60,0	1/1:3,29:32:92.29:805,92,0	0/0:43,0:43:99:0,129,2525	0/0:29,0:29:87.29:0,87,1733	0/0:38,0:38:99:0,114,2315	1/1:0,15:15:36.72:333,37,0	0/0:28,0:28:84.29:0,84,1694	0/0:25,0:25:75.24:0,75,1458	0/0:71,0:71:99:0,211,4218	1/1:4,28:32:83.37:751,83,0	1/1:1,10:11:30.02:274,30,0	1/1:1,13:14:33.90:299,34,0	1/1:5,23:28:78.85:694,79,0	0/0:32,0:32:96.33:0,96,1936	0/0:34,0:34:99:0,102,2071	0/0:18,0:18:54.19:0,54,1097
chr10	92895688	.	TAGGACA	T	9285.86	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=19.440;DP=754;FS=1.390;HRun=0;HaplotypeScore=209.8795;InbreedingCoeff=0.9998;MQ=75.71;MQ0=0;MQRankSum=-19.351;QD=52.76;ReadPosRankSum=4.842;VQSLOD=4.9274;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,121,4294	0/0:12,0:12:36.12:0,36,1354	0/0:19,0:19:54.16:0,54,1730	0/0:22,0:22:63.15:0,63,1933	0/0:20,0:20:60.19:0,60,2036	0/0:20,0:20:60.21:0,60,2252	0/0:37,0:37:99:0,111,3874	0/0:33,0:33:96.32:0,96,3463	0/0:24,0:24:69.24:0,69,2596	0/0:23,0:23:69.24:0,69,2456	0/0:14,0:14:42.14:0,42,1502	1/1:0,32:32:96.33:1789,96,0	1/1:1,19:20:60.21:1112,60,0	1/1:1,28:31:93.32:1705,93,0	0/0:42,0:42:99:0,126,4483	0/0:30,0:30:90.31:0,90,3345	0/0:37,0:37:99:0,111,4016	1/1:0,15:15:44.69:728,45,0	0/0:29,0:29:84.28:0,84,2873	0/0:22,0:22:66.22:0,66,2214	0/0:69,0:69:99:0,208,7252	1/1:1,29:30:81.75:1489,82,0	1/1:0,10:10:30:517,30,0	1/1:0,13:13:33.11:586,33,0	1/1:1,24:25:75.25:1359,75,0	0/0:31,0:31:93.31:0,93,3020	0/0:35,0:35:99:0,105,3889	0/0:18,0:18:54.19:0,54,2023
chr10	92896794	.	G	GACC	1415.42	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-5.623;DP=374;FS=2.812;HRun=0;HaplotypeScore=79.4758;InbreedingCoeff=0.8438;MQ=73.38;MQ0=0;MQRankSum=0.995;QD=12.99;ReadPosRankSum=-3.146;VQSLOD=2.7453;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:60.49:0,60,505	0/0:3,0:3:3.88:0,4,26	0/0:8,0:7:2.59:0,3,33	0/0:13,0:12:19.50:0,20,196	1/1:8,0:8:11.90:97,12,0	0/0:19,0:21:59.46:0,59,597	0/0:21,0:21:45.03:0,45,471	1/1:3,7:10:20.92:166,21,0	1/1:13,1:14:20.97:302,21,0	1/1:1,7:8:14.92:144,15,0	1/1:4,0:4:2.91:17,3,0	0/0:21,0:21:57.13:0,57,614	0/0:20,0:23:59.99:0,60,615	0/0:12,0:15:35.98:0,36,374	0/0:13,0:15:35.76:0,36,391	1/1:2,7:9:6.02:124,6,0	0/0:16,0:17:42.01:0,42,403	0/0:18,0:19:51.03:0,51,532	1/1:11,0:11:23.95:234,24,0	1/1:6,0:6:5.99:50,6,0	1/1:11,3:16:11.92:91,12,0	0/0:12,0:13:29.93:0,30,303	0/0:6,0:7:20.47:0,20,179	0/0:20,0:20:38.93:0,39,395	0/0:17,0:17:42.05:0,42,422	1/1:11,0:11:18.48:261,18,0	1/1:8,0:8:2.88:15,3,0	1/1:4,0:4:6.02:120,6,0
chr10	92896795	.	ACC	A	2661.76	PASS	AB=0.875;AC=22;AF=0.393;AN=56;BaseQRankSum=-3.050;DP=383;FS=23.413;HRun=12;HaplotypeScore=58.9404;InbreedingCoeff=0.7269;MQ=76.76;MQ0=0;MQRankSum=0.459;QD=12.38;ReadPosRankSum=5.441;VQSLOD=0.2708;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:20,2:30:34.62:35,0,117	0/0:3,0:3:3:0,3,26	0/0:8,0:8:14.62:0,15,108	0/0:16,0:15:23.27:0,23,252	0/0:6,0:6:8.97:0,9,80	1/1:10,4:21:39.65:312,40,0	1/1:6,14:21:36.06:364,36,0	0/0:10,0:10:4.74:0,5,23	0/0:7,0:14:20.27:0,20,164	0/0:7,0:7:8.95:0,9,70	0/0:4,0:4:3.45:0,3,22	1/1:7,12:21:41.51:387,42,0	1/1:9,14:23:44.61:429,45,0	1/1:9,2:15:22.81:187,23,0	0/0:15,0:17:28.60:0,29,263	0/0:9,0:9:6.01:0,6,56	0/0:15,0:18:37.94:0,38,336	1/1:6,10:19:29.21:319,29,0	0/0:3,0:11:14.96:0,15,138	0/1:8,0:8:0:0,0,0	0/0:18,0:17:6.83:0,7,44	1/1:4,7:12:20.77:195,21,0	1/1:5,2:7:5.69:112,6,0	1/1:6,13:20:24.22:296,24,0	1/1:9,9:18:24.08:225,24,0	0/0:10,0:10:12.47:0,12,105	0/0:10,0:10:2.68:0,3,28	0/0:5,0:5:6:0,6,53
chr10	92896796	.	C	CCA	1043.79	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-4.573;DP=380;FS=8.411;HRun=0;HaplotypeScore=82.0399;InbreedingCoeff=0.8597;MQ=77.80;MQ0=0;MQRankSum=0.401;QD=9.76;ReadPosRankSum=-2.815;VQSLOD=1.4377;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:59.45:0,59,482	0/0:3,0:3:3.88:0,4,27	0/0:10,0:8:11.31:0,11,73	0/0:17,0:16:28.41:0,28,247	1/1:1,5:6:11.91:120,12,0	0/0:22,0:22:58.54:0,59,506	0/0:20,0:20:44.69:0,45,389	1/1:8,0:8:17.14:138,17,0	1/1:14,0:14:20.78:167,21,0	1/1:6,0:6:11.98:126,12,0	1/1:5,0:5:2.72:17,3,0	0/0:21,0:21:57.04:0,57,518	0/0:23,0:23:59.74:0,60,513	0/0:16,0:16:42.01:0,42,372	0/0:17,0:17:39:0,39,392	1/1:8,0:8:6.02:63,6,0	0/0:17,0:17:42.49:0,42,391	0/0:19,0:19:50.70:0,51,442	1/1:9,0:9:20.12:191,20,0	1/1:8,0:8:5.99:50,6,0	1/1:17,0:16:11.60:90,12,0	0/0:12,0:12:29.88:0,30,255	0/0:8,0:8:23.32:0,23,182	0/0:20,0:20:38.28:0,38,319	0/0:18,0:18:44.80:0,45,387	1/1:10,0:10:18.48:211,18,0	1/1:11,0:11:1.90:6,2,0	1/1:5,0:5:6.02:71,6,0
chr10	92896797	.	C	CA	761.50	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-3.070;DP=380;FS=12.476;HRun=0;HaplotypeScore=74.5597;InbreedingCoeff=0.8119;MQ=77.64;MQ0=0;MQRankSum=0.044;QD=7.77;ReadPosRankSum=-3.357;VQSLOD=1.7573;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:65.46:0,65,504	0/0:3,0:3:3.88:0,4,27	0/0:10,0:8:13.75:0,14,95	0/0:17,0:16:29.26:0,29,191	1/1:7,0:7:11.67:69,12,0	0/0:23,0:23:30.62:0,31,374	0/0:20,0:20:33.49:0,33,272	1/1:7,0:7:15.12:136,15,0	1/1:13,1:14:11.10:98,11,0	1/1:8,0:8:13.19:106,13,0	0/1:6,0:6:11.29:11,0,19	0/0:21,0:21:56.43:0,56,407	0/0:23,0:23:59.29:0,59,409	0/0:17,0:17:41.93:0,42,292	0/0:17,0:17:39.12:0,39,365	1/1:9,0:9:5.83:35,6,0	0/0:17,0:17:42:0,42,388	0/0:19,0:19:39.73:0,40,331	1/1:8,0:8:16.94:134,17,0	1/1:7,0:7:5.74:50,6,0	1/1:17,0:16:10.49:88,10,0	0/0:12,0:12:29.58:0,30,202	0/0:9,0:9:17.30:0,17,133	0/0:18,0:18:17.52:0,18,208	0/0:17,0:17:43.72:0,44,323	1/1:2,8:10:18:171,18,0	0/0:4,7:11:5.68:0,6,38	1/1:1,4:5:6.02:68,6,0
chr10	92896806	.	CCG	C	675.88	PASS	AB=0.964;AC=11;AF=0.196;AN=56;BaseQRankSum=4.954;DP=393;FS=0.478;HRun=0;HaplotypeScore=67.0565;InbreedingCoeff=-0.0394;MQ=85.88;MQ0=0;MQRankSum=-1.543;QD=3.52;ReadPosRankSum=10.343;VQSLOD=0.1680;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:11.69:12,0,213	0/0:1,0:1:0:0,0,0	0/0:12,0:10:22.39:0,22,148	0/0:24,0:23:45.09:0,45,331	0/0:10,0:10:20.72:0,21,164	0/1:22,1:23:52.02:52,0,135	0/1:18,2:20:33.56:190,0,34	0/0:5,0:5:8.88:0,9,58	0/0:15,0:15:11.72:0,12,110	0/0:9,0:9:10.77:0,11,74	0/0:7,0:7:8.98:0,9,85	0/1:20,1:21:91.32:151,0,91	1/1:19,1:20:21.05:179,21,0	0/1:15,0:15:20.56:21,0,80	0/0:20,0:20:32.56:0,33,297	0/0:11,0:11:11.19:0,11,85	0/0:22,0:22:23.02:0,23,204	0/1:16,1:17:38.35:90,0,38	0/0:6,0:6:13.79:0,14,132	0/0:8,0:8:5.70:0,6,44	0/0:18,0:17:11.90:0,12,88	0/1:15,0:15:2.12:2,0,107	0/0:12,0:12:4.65:0,5,134	0/1:19,2:21:80.10:80,0,93	0/1:14,0:14:43.26:43,0,90	0/0:7,0:7:6.97:0,7,31	0/0:10,0:10:14.49:0,14,125	0/0:4,0:4:3.94:0,4,28
chr10	92897326	.	TA	T	4106.47	PASS	AB=0.721;AC=44;AF=0.786;AN=56;BaseQRankSum=6.411;DP=603;FS=0.502;HRun=14;HaplotypeScore=75.4575;InbreedingCoeff=0.2634;MQ=73.95;MQ0=0;MQRankSum=-1.682;QD=7.72;ReadPosRankSum=1.656;VQSLOD=2.9056;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,18:31:3.50:230,0,4	0/1:6,0:6:4.77:5,0,96	0/0:28,1:23:0.51:0,1,134	0/0:14,0:12:4.62:0,5,54	1/1:5,12:17:1.60:148,2,0	0/1:11,15:27:29.59:223,0,30	1/1:3,12:15:29.71:205,30,0	1/1:9,24:35:44.97:414,45,0	1/1:9,14:23:1.81:157,2,0	1/1:8,13:22:8.83:188,9,0	1/1:3,6:10:19.87:129,20,0	1/1:5,0:20:28.49:82,28,0	1/1:4,0:19:28.48:83,28,0	1/1:4,0:22:35.53:108,36,0	0/1:25,4:29:25.62:26,0,332	1/1:10,14:24:5.90:229,6,0	0/0:24,0:28:62.89:0,63,565	1/1:7,1:22:31.43:103,31,0	0/1:7,9:18:10.70:137,0,11	1/1:6,21:29:28.38:311,28,0	0/1:5,15:21:3.41:223,0,3	1/1:4,0:15:22.39:65,22,0	1/1:4,0:21:28.14:82,28,0	1/1:3,0:28:46.85:135,47,0	1/1:4,0:16:22.37:65,22,0	1/1:5,11:16:32.69:226,33,0	1/1:8,28:37:42.29:418,42,0	1/1:2,5:9:18.95:115,19,0
chr10	92897905	.	AT	A	19560.11	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=5.155;DP=572;FS=4.865;HRun=1;HaplotypeScore=60.4391;InbreedingCoeff=0.9956;MQ=82.34;MQ0=0;MQRankSum=-6.480;QD=39.60;ReadPosRankSum=4.374;VQSLOD=5.4536;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:99:1426,102,0	0/0:5,0:5:15.05:0,15,240	0/0:23,0:23:68.72:0,69,903	0/0:8,0:8:24.04:0,24,295	1/1:0,25:25:72.24:1007,72,0	1/1:0,19:19:45.15:629,45,0	1/1:0,12:12:36.12:504,36,0	1/1:0,33:33:96.30:1310,96,0	1/1:0,24:24:72.24:1007,72,0	1/1:0,34:34:99:1410,102,0	1/1:0,12:12:33.11:461,33,0	1/1:0,21:21:60.20:839,60,0	1/1:0,25:25:69.23:965,69,0	1/1:0,16:16:42.14:587,42,0	0/0:24,0:24:72.22:0,72,1100	1/1:0,24:24:72.24:1007,72,0	0/0:18,0:18:54.18:0,54,863	1/1:0,17:17:51.17:713,51,0	1/1:0,24:24:72.21:958,72,0	1/1:0,15:15:42.14:587,42,0	1/1:0,15:15:45.15:629,45,0	1/1:0,18:18:54.18:755,54,0	1/1:0,15:15:39.09:545,39,0	1/1:2,17:19:54.14:733,54,0	1/1:0,13:13:39.13:546,39,0	1/1:0,27:27:81.24:1094,81,0	1/1:0,36:36:99:1385,99,0	1/1:0,11:11:33.11:462,33,0
chr10	92901500	.	ACTG	A	214.99	PASS	AB=0.728;AC=2;AF=0.037;AN=54;BaseQRankSum=5.076;DP=375;FS=4.807;HRun=0;HaplotypeScore=84.1430;InbreedingCoeff=-0.0531;MQ=84.13;MQ0=0;MQRankSum=4.974;QD=8.96;ReadPosRankSum=-2.384;VQSLOD=1.8891;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.16:0,48,1181	0/0:6,0:6:18.06:0,18,439	0/1:8,4:13:99:174,0,357	0/1:6,2:10:99:129,0,205	0/0:3,0:3:9.03:0,9,222	./.	0/0:43,0:43:99:0,129,3054	0/0:9,0:9:27.09:0,27,658	0/0:6,0:6:18.06:0,18,435	0/0:12,0:12:33.11:0,33,814	0/0:4,0:4:5.96:0,6,148	0/0:10,0:10:30.10:0,30,740	0/0:13,0:13:39.13:0,39,910	0/0:12,0:12:36.12:0,36,879	0/0:10,0:10:30.08:0,30,688	0/0:5,0:5:15.05:0,15,369	0/0:14,0:14:42.14:0,42,975	0/0:21,0:21:63.16:0,63,1439	0/0:22,0:22:66.13:0,66,1443	0/0:2,0:2:6.02:0,6,148	0/0:67,0:67:99:0,202,4944	0/0:6,0:6:15.05:0,15,366	0/0:4,0:4:12.04:0,12,296	0/0:32,0:32:93.32:0,93,2283	0/0:5,0:5:15.05:0,15,368	0/0:15,0:15:42.14:0,42,1035	0/0:7,0:7:21.05:0,21,467	0/0:7,0:7:18.06:0,18,440
chr10	92901506	.	CCG	C	161.14	PASS	AB=0.767;AC=2;AF=0.037;AN=54;BaseQRankSum=4.520;DP=360;FS=5.621;HRun=0;HaplotypeScore=69.2145;InbreedingCoeff=-0.0514;MQ=78.90;MQ0=0;MQRankSum=4.433;QD=8.48;ReadPosRankSum=-2.315;VQSLOD=2.3368;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.15:0,48,937	0/0:6,0:6:18.04:0,18,328	0/1:7,4:11:99:154,0,187	0/1:6,2:7:95.68:96,0,105	0/0:3,0:3:9.03:0,9,183	./.	0/0:42,0:42:99:0,126,2462	0/0:9,0:9:27.07:0,27,467	0/0:6,0:6:18.06:0,18,360	0/0:13,0:13:36.06:0,36,620	0/0:4,0:4:9.02:0,9,147	0/0:9,0:9:27.08:0,27,512	0/0:12,0:12:36.12:0,36,730	0/0:14,0:14:42.11:0,42,779	0/0:9,0:9:27.09:0,27,547	0/0:5,0:5:15.05:0,15,304	0/0:12,0:12:36.12:0,36,731	0/0:19,0:19:54.19:0,54,1096	0/0:18,0:18:54.17:0,54,1033	0/0:2,0:2:6.02:0,6,122	0/0:67,0:67:99:0,193,3707	0/0:5,0:5:15.05:0,15,276	0/0:4,0:4:12.04:0,12,244	0/0:34,0:34:99:0,102,2020	0/0:5,0:5:15.05:0,15,302	0/0:15,0:15:42.14:0,42,837	0/0:6,0:6:18.06:0,18,364	0/0:6,0:6:18.06:0,18,365
chr10	92902470	.	CA	C	750.04	PASS	AB=0.724;AC=11;AF=0.196;AN=56;BaseQRankSum=-3.349;DP=641;FS=0.000;HRun=16;HaplotypeScore=119.8358;InbreedingCoeff=-0.0104;MQ=66.60;MQ0=2;MQRankSum=-0.102;QD=3.33;ReadPosRankSum=6.287;VQSLOD=0.1863;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:67.83:0,68,324	0/0:10,0:14:13:0,13,142	0/0:12,0:9:2.92:0,3,25	0/1:16,0:12:10.25:10,0,15	0/0:7,0:21:35.68:0,36,192	0/0:12,0:19:23.82:0,24,190	0/0:19,0:24:46.45:0,46,283	0/0:14,0:27:39.09:0,39,264	0/0:22,0:21:42.68:0,43,230	0/0:17,0:27:40.51:0,41,223	0/0:10,0:23:49.35:0,49,249	1/1:6,7:14:14.55:90,15,0	0/1:16,6:22:43.05:83,0,43	0/1:16,11:28:18.43:88,0,18	0/0:14,0:14:17.93:0,18,138	0/0:10,0:21:31.85:0,32,185	0/1:13,4:17:0.14:0,0,200	0/1:14,14:29:43.20:157,0,43	0/0:15,0:27:52.05:0,52,249	0/0:11,0:30:53.45:0,53,287	0/0:7,0:19:12.47:0,12,71	0/1:12,14:28:65.14:139,0,65	0/1:14,12:26:52.96:141,0,53	0/1:9,10:21:72.37:98,0,72	0/1:11,9:23:20.95:91,0,21	0/0:10,0:22:53.05:0,53,303	0/0:9,0:34:20.27:0,20,119	0/0:10,0:15:20.89:0,21,127
chr10	92903215	.	CG	C	1098.48	PASS	AB=0.944;AC=19;AF=0.339;AN=56;BaseQRankSum=2.325;DP=492;FS=5.944;HRun=11;HaplotypeScore=71.3558;InbreedingCoeff=0.4232;MQ=75.31;MQ0=1;MQRankSum=0.115;QD=4.86;ReadPosRankSum=5.901;VQSLOD=0.9714;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:17.69:0,18,150	0/0:10,0:10:3.47:0,3,29	0/0:18,0:19:18.15:0,18,213	0/1:12,0:11:13.15:49,0,13	0/0:9,0:10:0:0,0,0	0/0:13,0:18:2.96:0,3,19	0/0:14,0:30:5.72:0,6,29	0/1:16,1:17:13.43:13,0,49	0/0:23,0:23:27.03:0,27,266	0/0:18,0:18:9.02:0,9,96	0/0:8,1:9:6:0,6,56	1/1:25,2:27:23.80:188,24,0	1/1:10,3:14:7.98:55,8,0	1/1:11,2:13:11.91:97,12,0	0/0:18,0:18:5.45:0,5,235	0/0:18,0:18:33.02:0,33,311	0/0:32,0:32:47.99:0,48,445	1/1:13,14:27:38.92:320,39,0	0/0:14,0:14:18.03:0,18,183	0/0:10,0:10:0:0,0,0	0/1:28,3:31:20.31:20,0,172	1/1:7,4:12:13.29:101,13,0	1/1:6,1:7:5.96:49,6,0	1/1:19,18:38:42.65:330,43,0	0/1:12,1:13:23.63:39,0,24	0/1:13,1:14:15.61:16,0,55	0/0:8,0:8:8.99:0,9,85	0/0:5,0:5:5.99:0,6,48
chr10	92904745	.	AAC	A	482.36	PASS	AB=0.923;AC=8;AF=0.154;AN=52;BaseQRankSum=-3.167;DP=632;FS=0.000;HRun=0;HaplotypeScore=125.5417;InbreedingCoeff=0.2701;MQ=68.72;MQ0=8;MQRankSum=2.072;QD=3.11;ReadPosRankSum=0.574;VQSLOD=2.5204;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:32:4.57:0,5,26	0/1:9,2:11:15.34:15,0,205	./.	./.	0/0:17,0:17:2.74:0,3,13	1/1:13,1:13:17.81:154,18,0	1/1:23,5:28:38.88:408,39,0	0/0:28,0:27:30.58:0,31,185	0/0:15,0:15:8.69:0,9,67	0/0:20,0:18:32.18:0,32,205	0/0:8,0:8:2.98:0,3,22	0/0:27,0:27:35.85:0,36,349	0/1:19,0:19:12.45:12,0,176	0/0:31,0:31:4.06:0,4,156	0/1:26,6:33:9.68:10,0,637	0/0:22,0:20:17.88:0,18,133	0/1:50,0:50:21.05:21,0,853	0/0:27,0:26:53.96:0,54,492	0/0:14,0:13:11.88:0,12,84	0/0:7,0:6:5.36:0,5,22	0/0:29,0:25:8.92:0,9,66	0/0:19,0:19:18.02:0,18,185	0/0:12,0:12:21.01:0,21,217	0/0:43,0:44:60.05:0,60,576	0/0:9,0:9:15.03:0,15,166	0/0:29,0:28:30.72:0,31,190	0/0:12,0:12:5.77:0,6,38	0/0:17,0:17:17.15:0,17,101
chr10	92904782	.	A	AC	1091.81	PASS	AB=0.951;AC=20;AF=0.357;AN=56;BaseQRankSum=9.684;DP=661;FS=8.787;HRun=1;HaplotypeScore=124.4825;InbreedingCoeff=-0.2422;MQ=52.34;MQ0=21;MQRankSum=1.011;QD=2.81;ReadPosRankSum=4.311;VQSLOD=-0.4585;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:32:14.56:0,15,463	0/0:15,0:15:42.11:0,42,543	0/0:15,0:7:18.03:0,18,224	0/0:23,0:9:26.27:0,26,278	0/1:14,1:15:17.65:32,0,18	0/0:18,0:19:13.84:0,14,95	0/0:36,0:36:58.17:0,58,403	0/0:19,0:18:37.83:0,38,362	0/1:22,1:23:27.92:52,0,28	0/1:7,5:12:76.19:159,0,76	0/1:13,0:11:5.69:18,0,6	0/1:27,0:27:24.86:25,0,115	0/1:22,0:22:32.53:33,0,61	0/1:26,0:26:18.35:44,0,18	0/0:46,0:46:99:0,100,1303	0/1:17,3:18:12.48:142,0,12	0/0:50,0:50:99:0,122,1469	1/1:29,0:26:2.24:196,2,0	0/1:14,0:12:17.07:17,0,207	0/1:12,2:13:40.16:68,0,40	0/1:44,2:44:3.55:10,0,4	0/1:17,2:19:38.21:62,0,38	0/1:16,0:16:26.97:27,0,30	0/1:47,0:46:37.05:164,0,37	0/1:15,0:15:39.80:41,0,40	0/1:20,0:18:9.94:10,0,259	0/0:16,0:16:0.49:0,0,15	1/1:9,1:10:16.92:157,17,0
chr10	92904783	.	AAAC	A	7147.64	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=8.253;DP=657;FS=6.487;HRun=0;HaplotypeScore=116.6247;InbreedingCoeff=0.9107;MQ=52.56;MQ0=21;MQRankSum=0.406;QD=15.02;ReadPosRankSum=-1.104;VQSLOD=3.7699;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:42.14:0,42,804	0/0:15,0:15:36.11:0,36,657	0/0:15,0:7:18.06:0,18,278	0/0:25,0:11:33.06:0,33,488	1/1:16,0:16:17.65:183,18,0	1/1:20,0:20:54.14:701,54,0	1/1:29,0:36:50.36:668,50,0	1/1:12,7:18:17.98:205,18,0	1/1:22,1:23:54.09:711,54,0	1/1:13,0:13:17.96:199,18,0	1/1:6,7:11:8.69:59,9,0	1/1:24,1:25:42.06:532,42,0	1/1:7,14:22:5.72:63,6,0	1/1:23,1:24:41.76:502,42,0	0/0:45,0:45:65.32:0,65,1778	1/1:20,0:18:41.58:470,42,0	0/0:42,4:48:78.24:0,78,1429	1/1:28,0:25:41.76:376,42,0	1/1:14,0:12:12.03:151,12,0	1/1:9,5:13:8.71:61,9,0	1/1:13,31:42:11.62:158,12,0	1/1:19,0:19:33.07:435,33,0	1/1:19,0:19:11.84:143,12,0	1/1:46,0:45:68.95:748,69,0	1/1:15,0:15:27.02:318,27,0	1/1:12,8:18:18.03:208,18,0	1/1:4,12:16:7.99:53,8,0	1/1:9,0:9:15.05:202,15,0
chr10	92904785	.	AC	A	4683.89	PASS	AB=0.806;AC=37;AF=0.661;AN=56;BaseQRankSum=10.779;DP=639;FS=1.630;HRun=1;HaplotypeScore=102.7253;InbreedingCoeff=0.3584;MQ=53.67;MQ0=21;MQRankSum=3.883;QD=10.16;ReadPosRankSum=0.547;VQSLOD=2.6127;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:37.68:0,38,584	0/0:16,0:16:45.13:0,45,634	0/0:17,0:7:18.06:0,18,256	0/0:26,0:14:39.02:0,39,433	1/1:6,10:16:13.36:114,13,0	1/1:7,13:20:4.40:263,4,0	0/1:20,16:36:99:223,0,196	0/1:16,0:15:45.55:46,0,109	1/1:3,19:22:44.09:360,44,0	0/1:7,7:14:35.35:91,0,35	1/1:13,0:10:8.85:60,9,0	1/1:4,19:23:12.61:305,13,0	0/1:19,2:21:14.27:89,0,14	1/1:3,21:24:44.07:345,44,0	0/0:44,0:44:94.95:0,95,1536	1/1:4,15:17:43.72:299,44,0	0/0:44,0:44:99:0,103,1430	1/1:3,25:25:45.68:600,46,0	0/1:13,3:14:69.05:93,0,69	1/1:14,0:13:12.76:71,13,0	1/1:42,1:41:16.21:106,16,0	1/1:3,16:19:3.94:242,4,0	0/1:5,13:18:13.52:149,0,14	1/1:2,42:43:73.52:779,74,0	1/1:2,12:14:14.85:198,15,0	0/1:18,1:17:83.40:88,0,83	1/1:14,0:14:3.56:23,4,0	1/1:3,5:8:6.43:141,6,0
chr10	92905806	.	TGCAGGATGCCCTGGGTCTGATCTCCA	T	17225.47	PASS	AB=0.676;AC=41;AF=0.732;AN=56;BaseQRankSum=12.376;DP=350;FS=109.864;HRun=0;HaplotypeScore=237.4456;InbreedingCoeff=0.7228;MQ=52.66;MQ0=0;MQRankSum=-11.610;QD=92.61;ReadPosRankSum=5.004;VQSLOD=1.7036;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,11:23:57:1565,0,57	0/0:15,0:15:45.15:0,45,4208	0/0:22,0:20:57.19:0,57,3780	0/0:25,0:24:63.11:0,63,3815	1/1:2,1:3:3.01:211,3,0	0/0:16,0:16:42.13:0,42,3484	0/0:31,0:31:87.30:0,87,8815	1/1:8,0:8:3:26,3,0	1/1:1,11:12:24.08:1685,24,0	1/1:3,2:5:6.02:421,6,0	1/1:1,6:7:15.05:771,15,0	1/1:4,6:10:12.04:843,12,0	1/1:5,4:9:9.03:631,9,0	1/1:2,11:13:30.10:2013,30,0	0/0:26,0:26:69.24:0,69,6798	1/1:1,5:6:15.05:974,15,0	0/0:29,0:29:84.29:0,84,8020	1/1:2,2:4:3.01:211,3,0	1/1:1,3:4:9.03:632,9,0	1/1:3,4:7:12.04:618,12,0	1/1:7,5:12:5.90:235,6,0	1/1:0,6:6:15.05:959,15,0	1/1:1,4:5:6.02:421,6,0	1/1:7,10:17:14.45:958,14,0	1/1:3,6:9:15.05:886,15,0	1/1:2,7:9:21.07:1151,21,0	1/1:7,8:15:24.08:1592,24,0	1/1:0,2:2:6.02:421,6,0
chr10	92907636	.	TA	T	3566.92	PASS	AB=0.958;AC=50;AF=0.962;AN=52;BaseQRankSum=-6.426;DP=406;FS=3.920;HRun=1;HaplotypeScore=58.5934;InbreedingCoeff=-0.0172;MQ=68.92;MQ0=41;MQRankSum=-1.998;QD=9.10;ReadPosRankSum=1.136;VQSLOD=1.3462;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:9:5.56:82,6,0	1/1:0,3:3:3.48:42,3,0	0/1:84,4:25:40.14:40,0,319	0/1:90,4:28:99:101,0,364	1/1:0,7:7:3.01:41,3,0	1/1:0,7:7:6.91:85,7,0	1/1:0,6:6:5.67:82,6,0	1/1:0,8:8:22.89:295,23,0	1/1:0,10:9:3.01:42,3,0	1/1:0,11:8:24.08:334,24,0	./.	1/1:0,11:9:27.09:373,27,0	1/1:0,6:6:12.04:166,12,0	1/1:0,8:7:10.28:127,10,0	1/1:0,7:6:6.02:82,6,0	1/1:0,12:10:0.10:1,0,0	1/1:0,4:4:9.03:124,9,0	1/1:0,6:6:9.03:125,9,0	1/1:0,7:7:18.53:248,19,0	1/1:0,9:7:3.01:42,3,0	1/1:0,11:9:9.03:124,9,0	1/1:1,7:8:10.39:127,10,0	1/1:1,6:6:12.04:165,12,0	1/1:2,19:21:22.02:287,22,0	1/1:0,3:3:5.78:82,6,0	1/1:0,8:5:15.02:189,15,0	1/1:0,9:9:12.04:161,12,0	./.
chr10	92908192	.	TGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	T	18799.12	PASS	AB=0.700;AC=41;AF=0.732;AN=56;BaseQRankSum=7.138;DP=679;FS=3.868;HRun=0;HaplotypeScore=399.2007;InbreedingCoeff=0.7599;MQ=68.20;MQ0=17;MQRankSum=-4.346;QD=38.60;ReadPosRankSum=2.953;VQSLOD=1.6436;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:47,0:47:15.05:969,15,0	0/0:8,0:7:18.95:0,19,1840	0/0:42,0:18:14.83:0,15,708	0/0:72,0:31:27.94:0,28,414	1/1:9,13:22:17.74:1174,18,0	0/0:14,0:16:23.08:0,23,1696	0/0:16,0:17:21.07:0,21,1474	1/1:23,0:22:5.02:235,5,0	1/1:10,12:23:27.09:2034,27,0	1/1:12,14:26:32.14:1736,32,0	1/1:5,9:14:9.03:611,9,0	1/1:8,10:19:18.06:1321,18,0	1/1:9,15:24:15.52:1120,16,0	1/1:10,8:19:8.97:632,9,0	0/0:16,0:16:30.23:0,30,2666	1/1:12,12:24:21.07:1612,21,0	0/0:21,0:21:29.13:0,29,2579	0/1:12,9:21:6.23:226,0,6	1/1:16,15:30:41.88:1437,42,0	1/1:11,8:19:9.03:584,9,0	1/1:26,0:26:5.85:132,6,0	1/1:9,10:19:9.26:603,9,0	1/1:11,5:16:9.92:601,10,0	1/1:22,19:41:9.03:675,9,0	1/1:10,8:18:9.03:665,9,0	1/1:11,23:33:42.93:1969,43,0	1/1:5,8:13:3.48:233,3,0	1/1:4,4:8:3.01:232,3,0
chr10	92908202	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATCCTGCC	A	1739.21	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=9.807;DP=626;FS=3.531;HRun=0;HaplotypeScore=544.8497;InbreedingCoeff=0.1247;MQ=60.85;MQ0=24;MQRankSum=-7.913;QD=8.87;ReadPosRankSum=8.675;VQSLOD=-0.2335;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,24:43:15.05:1637,15,0	0/0:9,0:8:18.53:0,19,2055	0/0:41,0:15:38.80:0,39,1426	0/0:74,0:27:45.78:0,46,1386	0/0:18,0:18:30.26:0,30,428	0/0:21,0:21:44.33:0,44,3483	0/0:20,0:20:46.03:0,46,3505	0/0:15,0:14:38.70:0,39,781	0/1:21,0:21:66.02:66,0,161	0/0:24,0:24:0.54:0,1,1370	0/0:13,0:13:11.31:0,11,128	0/1:19,0:19:66.01:66,0,97	0/1:23,0:23:14.46:14,0,118	0/1:15,0:15:43.79:44,0,106	0/0:15,0:15:32.89:0,33,3525	0/1:22,0:22:7.34:35,0,7	0/0:19,0:19:34.93:0,35,3470	0/0:17,0:17:5.93:0,6,286	0/0:28,0:27:33.24:0,33,2151	0/0:18,0:18:20.29:0,20,274	0/0:23,0:23:24.52:0,25,454	0/0:18,0:18:14.24:0,14,157	0/0:13,0:13:11.26:0,11,138	0/1:37,0:36:3.67:4,0,17	0/0:15,0:15:0.80:0,1,76	0/0:28,0:27:14.93:0,15,2480	0/1:10,0:10:4.25:4,0,84	1/1:6,0:5:2.50:9,2,0
chr10	92908587	.	C	CA	895.54	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.840;DP=680;FS=2.900;HRun=9;HaplotypeScore=74.5443;InbreedingCoeff=0.9825;MQ=76.34;MQ0=0;MQRankSum=-2.729;QD=23.57;ReadPosRankSum=-1.257;VQSLOD=4.0780;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,141,1211	0/0:14,0:13:38.99:0,39,338	0/0:20,0:21:14.30:0,14,253	0/0:28,0:27:63.62:0,64,448	0/0:19,0:19:50.99:0,51,443	1/1:2,14:17:44.95:479,45,0	1/1:4,17:21:28.09:538,28,0	0/0:20,1:21:17.78:0,18,381	0/0:22,0:22:59.97:0,60,517	0/0:32,1:34:49.84:0,50,650	0/0:17,0:17:35.97:0,36,312	0/0:20,1:21:20.79:0,21,406	0/0:25,0:25:62.95:0,63,543	0/0:33,0:33:86.98:0,87,755	0/0:28,1:30:46.83:0,47,624	0/0:31,0:31:83.96:0,84,726	0/0:26,0:26:68.98:0,69,599	0/0:22,0:22:65.95:0,66,567	0/0:13,0:13:26.99:0,27,234	0/0:30,0:30:74.96:0,75,647	0/0:41,0:41:99:0,105,911	0/0:20,0:20:44.97:0,45,391	0/0:17,1:18:41.98:0,42,365	0/0:27,0:27:80.98:0,81,703	0/0:14,0:14:35.97:0,36,308	0/0:18,0:18:44.98:0,45,391	0/0:22,0:22:62.94:0,63,540	0/0:22,1:23:29.79:0,30,488
chr10	92909768	.	ATTTG	A	12639.01	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=12.963;DP=603;FS=3.486;HRun=0;HaplotypeScore=105.0488;InbreedingCoeff=0.9944;MQ=72.00;MQ0=4;MQRankSum=0.971;QD=30.24;ReadPosRankSum=2.609;VQSLOD=4.9939;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,2458	0/0:13,0:13:27.09:0,27,658	0/0:24,0:19:15.03:0,15,310	0/0:17,0:15:29.13:0,29,577	1/1:4,25:29:63.21:1030,63,0	0/0:18,0:18:39.12:0,39,899	0/0:22,0:22:48.15:0,48,1123	1/1:17,13:30:39.10:584,39,0	1/1:7,17:24:39.13:639,39,0	1/1:5,22:27:66.19:1031,66,0	1/1:2,13:15:33.11:539,33,0	1/1:2,13:15:30.10:491,30,0	1/1:7,15:22:39.13:639,39,0	1/1:6,11:17:33.11:541,33,0	0/0:32,0:32:69.24:0,69,1683	1/1:4,17:21:33.11:541,33,0	0/0:21,0:21:48.15:0,48,1088	1/1:7,18:25:45.15:737,45,0	1/1:10,6:16:18.03:271,18,0	1/1:6,14:20:33.04:509,33,0	1/1:4,15:19:30.10:491,30,0	1/1:5,11:16:27.09:442,27,0	1/1:4,13:17:24:390,24,0	1/1:0,13:13:33.11:541,33,0	1/1:3,15:18:33.11:541,33,0	1/1:4,24:28:72.20:1108,72,0	1/1:4,28:32:72.13:1180,72,0	1/1:4,10:13:24.08:393,24,0
chr10	92910073	.	TTAAC	T	6864.64	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.406;DP=609;FS=4.001;HRun=0;HaplotypeScore=103.6041;InbreedingCoeff=0.9950;MQ=85.61;MQ0=0;MQRankSum=-4.479;QD=42.90;ReadPosRankSum=3.509;VQSLOD=5.1056;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.30:0,90,2350	0/0:13,0:13:39.13:0,39,1001	0/0:16,0:16:42.14:0,42,1066	0/0:23,0:24:68.66:0,69,1534	0/0:24,0:24:57.40:0,57,1377	0/0:17,0:17:51.16:0,51,1266	0/0:15,0:15:45.15:0,45,1186	0/0:34,0:34:90.29:0,90,2320	0/0:23,0:23:66.19:0,66,1746	0/0:20,0:20:60.21:0,60,1634	0/0:12,0:12:29.62:0,30,694	1/1:1,20:21:51.17:969,51,0	1/1:5,19:24:57.16:1065,57,0	1/1:1,20:21:54.14:1008,54,0	0/0:41,0:41:99:0,120,3213	0/0:27,0:27:72.24:0,72,1884	0/0:23,0:23:69.24:0,69,1853	1/1:2,23:25:57.15:1067,57,0	0/0:23,0:23:60.21:0,60,1628	0/0:28,0:28:72.22:0,72,1819	0/0:32,0:32:90.30:0,90,2356	1/1:1,13:14:30.10:564,30,0	1/1:4,10:14:17.83:272,18,0	1/1:0,31:31:78.74:1513,79,0	1/1:0,10:10:21.07:407,21,0	0/0:17,0:17:48.16:0,48,1280	0/0:25,0:25:72.15:0,72,1763	0/0:5,0:5:15.05:0,15,411
chr10	92910074	.	TAA	T	1223.72	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.258;DP=607;FS=3.411;HRun=2;HaplotypeScore=98.4945;InbreedingCoeff=0.9894;MQ=85.65;MQ0=0;MQRankSum=-3.003;QD=7.70;ReadPosRankSum=4.708;VQSLOD=0.8498;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.31:0,90,1819	0/0:13,0:13:39.13:0,39,793	0/0:16,0:16:48.16:0,48,902	0/0:24,0:24:53.83:0,54,1185	0/0:24,0:24:60.63:0,61,1157	0/0:17,0:17:51.18:0,51,1026	0/0:15,0:15:45.15:0,45,904	0/0:33,0:33:96.31:0,96,1875	0/0:23,0:23:69.24:0,69,1372	0/0:20,0:20:60.21:0,60,1215	0/0:13,0:13:32.62:0,33,616	1/1:20,1:21:47.04:219,47,0	1/1:22,1:23:31.81:212,32,0	1/1:20,1:21:46.86:214,47,0	0/0:42,0:42:99:0,126,2506	0/0:26,0:26:78.25:0,78,1529	0/0:23,0:23:69.24:0,69,1375	1/1:25,0:25:33.78:201,34,0	0/0:23,0:23:66.22:0,66,1278	0/0:26,0:26:72.25:0,72,1452	0/0:33,0:33:96.31:0,96,1900	1/1:13,1:14:27.67:130,28,0	1/1:10,2:14:10.87:49,11,0	1/1:31,0:31:71.36:319,71,0	1/1:10,0:10:19.21:86,19,0	0/0:16,0:16:48.16:0,48,968	0/0:26,0:26:78.22:0,78,1485	0/0:5,0:5:15.05:0,15,305
chr10	92910077	.	CTA	C	772.10	PASS	AB=0.922;AC=13;AF=0.232;AN=56;BaseQRankSum=15.836;DP=608;FS=4.745;HRun=0;HaplotypeScore=99.7339;InbreedingCoeff=0.7059;MQ=84.98;MQ0=0;MQRankSum=-2.547;QD=4.89;ReadPosRankSum=4.763;VQSLOD=2.3080;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.31:0,90,1793	0/0:13,0:13:39.13:0,39,778	0/0:17,0:17:51.17:0,51,1002	0/0:22,0:22:66.23:0,66,1302	0/0:25,0:25:59.87:0,60,1093	0/0:17,0:17:48.16:0,48,958	0/0:15,0:15:45.15:0,45,896	0/0:30,0:30:87.30:0,87,1728	0/0:22,0:22:66.23:0,66,1341	0/0:23,0:23:69.24:0,69,1379	0/0:16,0:16:35.36:0,35,626	1/1:20,1:21:41.19:157,41,0	1/1:20,1:21:21.28:151,21,0	0/1:21,1:22:16.22:117,0,16	0/0:40,0:40:99:0,120,2423	0/0:26,0:26:78.27:0,78,1569	0/0:25,0:25:75.26:0,75,1505	1/1:24,0:24:44.92:166,45,0	0/0:23,0:23:66.23:0,66,1335	0/0:25,0:25:44.30:0,44,1311	0/0:33,0:33:93.31:0,93,1881	0/1:13,1:14:10.62:58,0,11	0/1:12,2:14:36.38:38,0,36	1/1:32,0:32:31.33:205,31,0	1/1:10,0:10:17.47:65,17,0	0/0:18,0:18:54.18:0,54,1069	0/0:25,0:25:75.22:0,75,1423	0/0:5,0:5:15.05:0,15,304
chr10	92912434	.	AAC	A	15177.13	PASS	AB=0.909;AC=47;AF=0.839;AN=56;BaseQRankSum=7.017;DP=757;FS=5.881;HRun=0;HaplotypeScore=95.5984;InbreedingCoeff=0.8086;MQ=63.36;MQ0=9;MQRankSum=2.869;QD=23.17;ReadPosRankSum=1.215;VQSLOD=5.5004;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,38:53:99:1220,102,0	0/0:2,0:2:6.02:0,6,96	0/0:40,0:22:22.32:0,22,313	0/0:37,0:20:10.06:0,10,268	1/1:3,15:18:45.14:540,45,0	1/1:2,18:20:45.14:540,45,0	1/1:8,25:34:69.04:806,69,0	1/1:10,23:33:66.19:781,66,0	1/1:3,25:28:60.05:719,60,0	1/1:3,19:22:56.98:640,57,0	1/1:1,11:12:30.09:360,30,0	1/1:2,18:21:47.77:553,48,0	1/1:5,17:23:50.99:590,51,0	1/1:11,26:37:69.21:828,69,0	0/0:23,0:23:57.19:0,57,912	1/1:4,30:35:80.91:928,81,0	0/1:27,2:30:10.86:11,0,980	1/1:7,16:24:20.91:512,21,0	1/1:12,11:23:33.08:382,33,0	1/1:7,20:27:57.17:684,57,0	1/1:15,50:68:99:1686,150,0	1/1:8,17:26:53.67:600,54,0	1/1:4,13:16:29.68:333,30,0	1/1:11,26:39:69.04:806,69,0	1/1:4,18:22:45.14:540,45,0	1/1:2,11:13:33.08:382,33,0	1/1:5,14:19:5.66:415,6,0	1/1:0,9:9:27.08:324,27,0
chr10	92913897	.	GCT	G	1797.93	PASS	AB=0.917;AC=23;AF=0.426;AN=54;BaseQRankSum=-0.013;DP=682;FS=1.250;HRun=0;HaplotypeScore=114.8552;InbreedingCoeff=0.7925;MQ=65.64;MQ0=20;MQRankSum=1.729;QD=6.18;ReadPosRankSum=3.221;VQSLOD=3.2159;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,15:41:26.90:278,27,0	0/0:5,0:5:6.02:0,6,90	./.	0/0:65,0:28:3.01:0,3,32	0/0:21,0:29:16.75:0,17,167	1/1:11,0:20:8.52:42,9,0	1/1:13,0:19:8.52:42,9,0	0/0:31,0:31:18.03:0,18,219	0/0:11,0:20:15:0,15,131	0/0:18,0:20:26.81:0,27,321	0/1:13,0:18:0:0,0,0	1/1:11,10:22:20.48:192,20,0	1/1:8,10:18:20.89:212,21,0	1/1:14,12:25:30.08:331,30,0	0/0:8,0:23:18.01:0,18,176	0/0:14,0:23:24:0,24,224	0/0:11,0:18:30.02:0,30,312	1/1:11,15:28:35.76:358,36,0	0/0:14,0:20:24.03:0,24,248	0/1:13,0:17:0:0,0,0	0/0:11,0:20:16.81:0,17,135	1/1:10,9:19:11.76:111,12,0	1/1:12,5:17:12.03:132,12,0	1/1:9,8:16:18.05:198,18,0	0/1:16,7:24:30.20:98,0,30	0/0:10,0:24:42.04:0,42,436	0/0:20,0:18:19.22:0,19,179	0/0:20,0:19:17.97:0,18,185
chr10	92915514	.	G	GTC	22380.30	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-5.743;DP=681;FS=1.622;HRun=0;HaplotypeScore=94.4069;InbreedingCoeff=0.9806;MQ=80.02;MQ0=1;MQRankSum=-3.282;QD=42.47;ReadPosRankSum=-0.094;VQSLOD=6.3973;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,44:46:99:1840,105,0	0/0:5,0:5:6.02:0,6,81	0/0:18,0:18:42.14:0,42,559	0/0:23,0:23:51.16:0,51,675	1/1:2,17:19:39.13:684,39,0	0/0:22,0:22:57.17:0,57,754	0/0:23,0:23:60.20:0,60,811	1/1:5,20:25:60.19:1020,60,0	1/1:0,28:28:78.27:1367,78,0	1/1:2,27:29:78.25:1340,78,0	1/1:2,15:18:35.50:629,36,0	1/1:4,20:25:56.80:984,57,0	1/1:1,24:25:72.25:1261,72,0	1/1:2,21:23:51.17:889,51,0	0/0:30,0:30:87.27:0,87,1161	1/1:3,18:21:48.16:842,48,0	0/0:33,0:33:87.29:0,87,1176	1/1:3,20:23:54.18:945,54,0	1/1:3,20:23:60.21:1051,60,0	1/1:2,19:21:54.18:935,54,0	1/1:3,43:46:74.95:1907,75,0	1/1:2,25:27:75.26:1315,75,0	1/1:1,13:14:36.12:630,36,0	1/1:1,26:27:75.26:1315,75,0	1/1:2,21:22:54.18:946,54,0	1/1:6,16:22:48.15:806,48,0	1/1:6,24:30:62.83:1094,63,0	1/1:0,11:11:33.11:578,33,0
chr10	92916135	.	AGT	A	351.24	PASS	AB=0.956;AC=10;AF=0.179;AN=56;BaseQRankSum=4.059;DP=750;FS=4.817;HRun=0;HaplotypeScore=212.5589;InbreedingCoeff=-0.0275;MQ=49.03;MQ0=56;MQRankSum=-4.296;QD=1.88;ReadPosRankSum=0.090;VQSLOD=2.3779;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,4:30:41.54:42,0,116	0/0:13,0:13:39.12:0,39,738	0/0:104,0:29:20.74:0,21,840	0/0:139,0:27:10.32:0,10,730	0/1:20,0:20:0.34:0,0,0	0/0:10,0:10:26.92:0,27,505	0/0:32,0:32:55.59:0,56,1340	0/0:20,0:18:26.38:0,26,702	0/1:27,0:26:19.21:19,0,229	0/0:15,0:15:42.11:0,42,738	0/0:13,0:12:1.20:0,1,112	0/1:29,1:29:58.48:58,0,222	1/1:14,1:15:1.62:142,2,0	0/1:16,3:19:56.09:56,0,171	0/0:21,0:21:57.14:0,57,1081	0/1:17,0:17:13.86:14,0,186	0/0:36,0:35:92.89:0,93,1618	0/1:14,1:15:99:102,0,136	0/0:18,0:17:51.11:0,51,815	0/0:15,0:15:11.83:0,12,204	0/0:23,0:23:5.93:0,6,96	0/0:16,2:17:14.04:0,14,151	0/0:16,2:17:13.64:0,14,60	0/0:11,4:15:5.75:0,6,73	0/0:18,5:22:13.86:0,14,150	0/0:27,0:26:77.98:0,78,1298	0/1:14,0:14:51.73:52,0,164	0/0:3,0:3:8.95:0,9,128
chr10	92916142	.	C	CACAGAG	3869.02	PASS	AB=0.961;AC=27;AF=0.482;AN=56;BaseQRankSum=0.165;DP=787;FS=10.621;HRun=0;HaplotypeScore=245.2453;InbreedingCoeff=0.2777;MQ=50.50;MQ0=48;MQRankSum=-2.782;QD=10.29;ReadPosRankSum=-2.528;VQSLOD=0.5182;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,14:35:9:143,9,0	0/0:14,0:14:36.11:0,36,743	0/0:111,0:35:45.53:0,46,907	0/0:142,0:33:38.49:0,38,565	0/0:21,0:21:0.09:0,0,0	0/0:10,0:10:30.09:0,30,583	0/0:32,0:32:74.95:0,75,1488	0/1:23,0:21:98.15:102,0,98	0/1:27,0:27:31.57:32,0,50	0/1:14,0:15:39.88:40,0,98	1/1:12,0:11:6.21:32,6,0	1/1:15,18:32:42.07:832,42,0	1/1:6,9:15:27.77:998,28,0	1/1:7,10:18:13.58:296,14,0	0/0:21,0:21:57.19:0,57,1212	0/1:20,0:20:17.88:18,0,75	0/0:35,0:34:78.21:0,78,1480	1/1:11,4:15:39.09:881,39,0	0/1:18,0:17:86.35:170,0,86	0/0:15,0:15:5.93:0,6,39	0/1:24,0:24:14.46:19,0,14	1/1:8,13:23:3.01:50,3,0	1/1:9,8:18:2.81:25,3,0	1/1:15,2:17:5.99:49,6,0	0/1:9,11:20:0:0,0,0	0/1:28,0:27:99:135,0,262	0/1:15,0:15:47.58:48,0,50	0/0:5,0:5:11.82:0,12,100
chr10	92916148	.	GAC	G	1129.67	PASS	AB=0.979;AC=20;AF=0.357;AN=56;BaseQRankSum=5.922;DP=783;FS=1.929;HRun=0;HaplotypeScore=230.2822;InbreedingCoeff=0.5592;MQ=54.86;MQ0=37;MQRankSum=-7.409;QD=4.73;ReadPosRankSum=2.767;VQSLOD=2.7104;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:33:31.23:0,31,252	0/0:14,0:14:42.12:0,42,743	0/0:112,1:40:69.86:0,70,1338	0/0:140,0:42:25.15:0,25,753	0/1:21,0:21:0.34:0,0,0	0/0:10,0:10:30.10:0,30,578	0/0:32,0:32:78.24:0,78,1438	1/1:24,0:22:3.16:199,3,0	1/1:26,1:27:16.02:82,16,0	1/1:14,0:14:40.17:216,40,0	0/0:11,0:10:4.05:0,4,13	0/0:35,1:35:52.89:0,53,540	0/1:15,1:16:1.58:2,0,338	0/0:18,0:18:31.22:0,31,229	0/0:21,0:21:57.16:0,57,1094	1/1:19,1:20:14.94:74,15,0	0/0:34,0:33:89.84:0,90,1477	0/1:14,0:14:54.80:55,0,198	0/1:18,0:17:0.29:157,0,0	0/1:13,1:14:15.78:23,0,16	1/1:24,0:24:2.82:17,3,0	0/0:23,0:23:17.23:0,17,132	0/0:18,0:18:16.72:0,17,85	0/0:19,0:19:20.77:0,21,261	0/0:21,0:21:13.90:0,14,102	1/1:28,0:27:5.68:318,6,0	0/1:14,0:14:5.54:117,0,6	1/1:5,0:5:8.70:48,9,0
chr10	92916150	.	CAG	C	3050.49	PASS	AB=0.600;AC=23;AF=0.411;AN=56;BaseQRankSum=4.132;DP=780;FS=0.416;HRun=0;HaplotypeScore=224.1564;InbreedingCoeff=0.7802;MQ=56.61;MQ0=35;MQRankSum=-6.673;QD=13.15;ReadPosRankSum=1.751;VQSLOD=3.5153;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,4:33:28.24:0,28,221	0/0:14,0:14:36.12:0,36,638	0/0:108,0:42:88.35:0,88,1262	0/0:140,0:45:53.49:0,53,878	0/1:2,19:21:0.34:0,0,0	0/0:11,0:11:33.10:0,33,550	0/0:31,0:31:80.08:0,80,1373	1/1:7,18:23:29.18:572,29,0	1/1:4,22:26:14.06:143,14,0	1/1:3,11:14:42.12:482,42,0	1/1:3,8:10:4.10:17,4,0	0/0:31,4:34:19.43:0,19,540	0/0:15,1:16:10.94:0,11,304	0/0:17,2:19:36.74:0,37,283	0/0:21,0:21:57.19:0,57,989	1/1:4,16:20:17.83:175,18,0	0/0:35,1:35:87.25:0,87,1404	0/1:9,5:14:99:154,0,228	1/1:4,13:17:39.11:463,39,0	0/1:2,12:14:4.68:59,0,5	1/1:3,21:24:6:58,6,0	0/0:22,0:22:14.25:0,14,136	0/0:15,3:18:16.73:0,17,106	0/0:16,2:18:20.74:0,21,288	0/0:20,1:21:10.94:0,11,88	1/1:4,23:26:69.20:795,69,0	1/1:6,8:14:12.65:222,13,0	1/1:1,4:5:11.77:117,12,0
chr10	92916158	.	CAG	C	3051.13	PASS	AB=0.524;AC=23;AF=0.411;AN=56;BaseQRankSum=3.951;DP=748;FS=3.823;HRun=0;HaplotypeScore=226.7712;InbreedingCoeff=0.9053;MQ=58.76;MQ0=30;MQRankSum=-7.996;QD=14.32;ReadPosRankSum=1.665;VQSLOD=3.4663;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:34.51:0,35,344	0/0:12,0:12:36.11:0,36,593	0/0:103,0:46:86.38:0,86,1296	0/0:129,1:47:66.24:0,66,917	0/1:2,20:22:0.34:0,0,0	0/0:12,0:12:33.11:0,33,557	0/0:32,0:32:83.09:0,83,1390	1/1:9,14:23:54.16:632,54,0	1/1:4,21:25:11.26:126,11,0	1/1:3,12:16:41.99:462,42,0	1/1:3,7:10:5.54:36,6,0	0/0:32,4:35:74.98:0,75,851	0/0:15,0:15:35.60:0,36,554	0/0:18,1:19:37.25:0,37,364	0/0:23,0:23:57.20:0,57,978	1/1:4,15:19:20.99:207,21,0	0/0:34,0:33:84.20:0,84,1359	0/0:13,1:14:4.07:0,4,388	1/1:6,10:15:30.09:352,30,0	1/1:5,10:15:14.62:138,15,0	1/1:2,20:22:6.02:71,6,0	0/0:16,0:16:17.26:0,17,187	0/0:17,1:18:16.73:0,17,108	0/0:15,1:16:23.82:0,24,358	0/0:20,0:20:13.95:0,14,139	1/1:3,23:25:69.18:768,69,0	1/1:4,6:10:15.03:168,15,0	1/1:5,4:9:26.75:304,27,0
chr10	92916200	.	AT	A	7054.46	PASS	AB=0.789;AC=46;AF=0.821;AN=56;BaseQRankSum=5.004;DP=534;FS=6.529;HRun=10;HaplotypeScore=148.9176;InbreedingCoeff=0.5166;MQ=80.77;MQ0=4;MQRankSum=-5.312;QD=14.76;ReadPosRankSum=3.357;VQSLOD=3.7797;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,14:21:29.06:259,29,0	0/0:9,0:9:24.05:0,24,256	0/1:26,3:27:22.62:23,0,355	0/1:33,2:26:16.62:17,0,278	0/1:11,12:23:24.39:224,0,24	1/1:1,11:12:32.98:286,33,0	1/1:4,15:19:38.98:339,39,0	1/1:5,10:15:26.95:231,27,0	1/1:9,17:26:38.95:338,39,0	1/1:1,10:11:29.99:260,30,0	1/1:3,6:9:14.97:130,15,0	1/1:7,24:30:39.90:521,40,0	1/1:3,8:11:20.98:182,21,0	1/1:5,11:16:26.96:234,27,0	0/0:19,0:19:57.06:0,57,590	1/1:6,27:33:68.95:599,69,0	0/0:28,0:28:72.16:0,72,773	1/1:1,12:13:32.99:286,33,0	1/1:5,21:26:62.98:547,63,0	1/1:1,14:15:38.99:339,39,0	1/1:5,13:18:20.95:182,21,0	0/1:5,6:11:12.02:135,0,12	1/1:4,9:13:23.98:208,24,0	1/1:1,23:24:59.97:521,60,0	1/1:5,13:18:29.51:257,30,0	1/1:9,8:17:23.94:208,24,0	1/1:2,12:14:32.91:286,33,0	1/1:1,17:18:50.96:443,51,0
chr10	92917044	.	C	CTTT	6698.11	PASS	AB=0.797;AC=44;AF=0.786;AN=56;BaseQRankSum=4.485;DP=454;FS=1.367;HRun=11;HaplotypeScore=106.9105;InbreedingCoeff=0.3879;MQ=74.34;MQ0=1;MQRankSum=-3.195;QD=16.34;ReadPosRankSum=-3.248;VQSLOD=2.7777;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:35:78.27:699,78,0	0/0:4,0:5:5.90:0,6,53	0/1:13,0:12:19.35:19,0,141	0/1:14,0:12:52.01:73,0,52	1/1:2,0:9:20.81:145,21,0	0/1:3,0:14:11:11,0,21	1/1:8,0:28:23.38:77,23,0	0/1:15,1:31:7.76:383,0,8	1/1:3,0:19:26.43:207,26,0	1/1:7,0:16:26.90:227,27,0	1/1:2,0:4:2.99:23,3,0	1/1:13,6:19:39:489,39,0	1/1:3,14:17:24.08:439,24,0	1/1:9,8:18:39.11:608,39,0	0/0:10,0:10:17.98:0,18,210	1/1:5,0:16:22.11:172,22,0	0/0:28,0:28:16.88:0,17,635	1/1:15,9:30:66.84:949,67,0	0/1:6,0:15:7.68:163,0,8	1/1:2,0:7:14.95:141,15,0	1/1:10,0:27:30.37:241,30,0	1/1:3,4:8:9.03:133,9,0	1/1:2,0:5:7.99:49,8,0	1/1:2,14:17:30.08:531,30,0	1/1:8,1:11:25.60:380,26,0	1/1:2,0:16:40.80:357,41,0	1/1:5,0:19:25.43:183,25,0	0/1:1,0:1:0:0,0,0
chr10	92917138	.	TG	T	6984.25	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=4.366;DP=388;FS=1.794;HRun=9;HaplotypeScore=62.7564;InbreedingCoeff=0.8771;MQ=64.79;MQ0=0;MQRankSum=-0.258;QD=22.82;ReadPosRankSum=1.582;VQSLOD=5.8396;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:54.03:494,54,0	0/0:3,0:3:9.01:0,9,95	0/0:5,0:4:6.02:0,6,89	0/0:2,0:4:0.89:0,1,2	1/1:1,8:9:24.01:219,24,0	0/0:3,0:5:9.15:0,9,54	0/0:15,0:27:54.41:0,54,335	1/1:5,13:18:38.94:356,39,0	1/1:1,20:21:57.02:522,57,0	1/1:5,6:11:17.90:165,18,0	1/1:0,3:3:5.99:50,6,0	1/1:2,12:14:33.02:302,33,0	1/1:2,14:16:42.01:383,42,0	1/1:2,17:19:48.02:439,48,0	0/0:11,0:11:33.10:0,33,381	1/1:1,12:13:39.02:357,39,0	0/0:27,0:27:72.18:0,72,810	1/1:1,28:29:78.04:714,78,0	1/1:6,5:11:20.99:188,21,0	1/1:0,6:6:18.01:165,18,0	1/1:4,39:43:99:933,102,0	1/1:1,7:8:21.01:192,21,0	1/1:0,3:3:6:55,6,0	1/1:0,16:16:42.02:384,42,0	1/1:1,5:6:15.01:137,15,0	1/1:3,11:14:36:325,36,0	1/1:0,14:14:42.02:384,42,0	1/1:0,8:8:24.01:220,24,0
chr10	92917643	.	TCCGGGA	T	1529.69	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.065;DP=667;FS=6.977;HRun=0;HaplotypeScore=164.7384;InbreedingCoeff=0.9408;MQ=80.01;MQ0=0;MQRankSum=-8.231;QD=42.49;ReadPosRankSum=-0.886;VQSLOD=3.0994;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:36:72.16:1625,72,0	0/0:8,0:8:21.07:0,21,670	0/0:22,0:22:54.14:0,54,1542	0/0:22,0:22:60.14:0,60,1639	0/0:19,0:19:51.17:0,51,1811	0/0:23,0:23:69.24:0,69,2437	0/0:37,0:37:99:0,108,3751	0/0:23,0:23:63.22:0,63,2062	0/0:27,0:27:78.27:0,78,2664	0/0:21,0:21:57.19:0,57,1978	0/0:5,0:5:9.03:0,9,323	0/0:20,0:20:57.19:0,57,1978	0/0:23,0:23:66.23:0,66,2286	0/0:25,0:25:75.26:0,75,2632	0/0:24,0:24:72.25:0,72,2571	0/0:17,0:17:48.16:0,48,1676	0/0:29,0:29:87.30:0,87,2961	0/0:35,0:35:99:0,102,3543	0/0:23,0:23:66.21:0,66,2214	0/0:13,0:13:30.10:0,30,1077	0/0:58,0:58:99:0,160,5423	0/0:21,0:21:63.22:0,63,2237	0/0:21,0:21:54.18:0,54,1892	0/0:41,0:41:99:0,123,4387	0/0:12,0:12:33.06:0,33,910	0/0:23,0:23:66.23:0,66,2289	0/0:28,0:28:78.27:0,78,2780	0/0:11,0:11:33.11:0,33,1189
chr10	92918131	.	A	ACTTGACC	4882.72	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.257;DP=736;FS=15.113;HRun=0;HaplotypeScore=164.5028;InbreedingCoeff=0.9948;MQ=92.04;MQ0=1;MQRankSum=-11.075;QD=103.89;ReadPosRankSum=-2.644;VQSLOD=4.7280;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,166,4297	0/0:8,0:8:24.08:0,24,647	0/0:50,0:50:99:0,136,3306	0/0:26,0:24:50.16:0,50,1151	0/0:20,0:20:60.21:0,60,1601	1/1:3,13:16:48.12:1858,48,0	1/1:12,17:31:87.18:3024,87,0	0/0:36,0:36:96.33:0,96,2516	0/0:25,0:25:75.24:0,75,1936	0/0:28,0:28:84.29:0,84,2255	0/0:17,0:17:51.18:0,51,1364	0/0:31,0:31:93.32:0,93,2490	0/0:24,0:24:72.25:0,72,1903	0/0:20,0:20:57.18:0,57,1463	0/0:30,0:30:87.27:0,87,2163	0/0:29,0:29:87.28:0,87,2273	0/0:33,0:32:99:0,99,2609	0/0:16,0:16:45.15:0,45,1180	0/0:24,0:24:69.23:0,69,1790	0/0:21,0:21:63.19:0,63,1536	0/0:43,0:43:99:0,117,3086	0/0:22,0:22:63.20:0,63,1631	0/0:28,0:28:84.27:0,84,2208	0/0:29,0:29:84.29:0,84,2216	0/0:12,0:12:36.12:0,36,959	0/0:29,0:29:84.29:0,84,2227	0/0:24,0:24:72.25:0,72,1902	0/0:6,0:6:18.06:0,18,485
chr10	92918442	.	TCA	T	939.84	PASS	AB=0.902;AC=29;AF=0.580;AN=50;BaseQRankSum=1.951;DP=548;FS=0.000;HRun=0;HaplotypeScore=79.7467;InbreedingCoeff=0.2797;MQ=74.27;MQ0=11;MQRankSum=-0.239;QD=3.00;ReadPosRankSum=1.759;VQSLOD=1.5491;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:37:10.77:46,11,0	0/1:7,1:8:15.95:26,0,16	./.	./.	1/1:15,1:16:8.85:72,9,0	0/0:22,0:22:23.65:0,24,267	0/0:19,0:19:12:0,12,119	1/1:29,0:28:2.98:21,3,0	1/1:20,3:25:26.64:215,27,0	1/1:21,0:23:5.84:42,6,0	1/1:8,3:11:6.02:64,6,0	0/1:17,0:17:10.72:11,0,65	0/1:13,0:13:9.86:10,0,126	0/0:13,0:12:12.04:0,12,177	0/1:21,2:23:17.29:17,0,114	0/1:7,5:12:28.68:114,0,29	0/0:13,0:23:23.74:0,24,181	0/0:21,0:21:15.40:0,15,174	1/1:14,0:13:2.97:20,3,0	./.	1/1:16,7:24:8.86:78,9,0	0/1:14,0:15:73.60:74,0,113	0/0:11,0:20:11.65:0,12,119	0/0:34,0:44:17.70:0,18,311	0/1:9,0:10:43.26:48,0,43	1/1:11,8:20:20.78:177,21,0	1/1:7,0:9:2.84:14,3,0	1/1:1,2:3:6.02:64,6,0
chr10	92918850	.	CTGTG	C	521.73	PASS	AC=10;AF=0.238;AN=42;BaseQRankSum=-0.169;DP=552;FS=10.490;HRun=0;HaplotypeScore=103.2932;InbreedingCoeff=0.6187;MQ=71.37;MQ0=15;MQRankSum=1.544;QD=5.11;ReadPosRankSum=2.306;VQSLOD=1.5033;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:42:9.03:0,9,123	0/0:7,0:7:3.01:0,3,46	./.	./.	0/0:19,0:18:12.03:0,12,166	0/0:12,0:11:15.05:0,15,235	0/0:28,0:25:9.01:0,9,158	./.	0/0:14,0:16:6.49:0,6,106	0/0:30,0:29:30.10:0,30,498	0/0:11,0:11:3.01:0,3,43	./.	1/1:12,3:13:5.55:64,6,0	1/1:10,4:14:6.15:133,6,0	0/0:14,0:13:12.02:0,12,155	0/0:19,0:19:3.01:0,3,65	0/0:20,0:27:8.50:0,8,80	1/1:19,2:21:4.59:90,5,0	0/0:18,0:17:8.99:0,9,97	./.	0/0:41,0:38:18.06:0,18,288	./.	./.	1/1:27,10:36:21.54:322,22,0	1/1:11,1:15:3.01:46,3,0	0/0:23,0:22:27.04:0,27,425	0/0:17,0:17:9.97:0,10,168	0/0:8,0:8:6.02:0,6,98
chr10	92919242	.	A	AT	1390.08	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.237;DP=544;FS=3.427;HRun=0;HaplotypeScore=48.4588;InbreedingCoeff=0.7484;MQ=55.55;MQ0=11;MQRankSum=2.646;QD=37.57;ReadPosRankSum=1.676;VQSLOD=3.4249;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:37:93.32:1485,93,0	0/0:6,0:6:18.06:0,18,251	0/0:13,0:1:2.37:0,2,8	0/0:16,0:5:9.02:0,9,110	0/0:16,0:16:48.16:0,48,671	0/0:20,0:15:42.14:0,42,586	0/0:28,0:28:84.20:0,84,1100	0/0:36,0:33:84.26:0,84,1142	0/0:31,0:30:78.25:0,78,1070	0/0:17,0:17:51.17:0,51,711	0/0:9,0:9:21.06:0,21,276	0/0:22,0:22:66.22:0,66,918	0/0:22,0:22:63.20:0,63,863	0/0:20,0:20:60.20:0,60,837	0/0:21,0:20:51.14:0,51,678	0/0:19,0:17:45.14:0,45,611	0/0:29,0:29:87.25:0,87,1191	0/0:20,0:20:60.17:0,60,804	0/0:16,0:12:36.11:0,36,486	0/0:6,0:6:18.06:0,18,251	0/0:26,0:26:75.25:0,75,1047	0/0:8,0:8:21.07:0,21,293	0/0:10,0:10:30.10:0,30,419	0/0:26,0:25:72.24:0,72,1006	0/0:22,0:22:63.18:0,63,846	0/0:18,0:18:54.17:0,54,739	0/0:26,0:25:69.21:0,69,944	0/0:3,0:3:6.02:0,6,84
chr10	92919395	.	T	TACAC	2897.80	PASS	AB=0.969;AC=40;AF=0.769;AN=52;BaseQRankSum=3.049;DP=537;FS=0.858;HRun=0;HaplotypeScore=117.8906;InbreedingCoeff=0.4402;MQ=64.68;MQ0=15;MQRankSum=-2.905;QD=7.03;ReadPosRankSum=-2.253;VQSLOD=2.1738;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:38:17.18:0,17,166	1/1:7,2:9:3.01:70,3,0	./.	./.	1/1:17,0:17:2.99:24,3,0	1/1:21,0:15:5.97:85,6,0	1/1:43,0:41:8.52:159,9,0	1/1:19,0:17:12.07:105,12,0	1/1:16,0:14:9.01:134,9,0	1/1:18,0:18:24.08:371,24,0	1/1:5,0:5:3.01:46,3,0	0/1:14,0:15:2.93:3,0,84	0/0:12,0:13:11.96:0,12,143	0/1:19,0:19:29.73:30,0,121	0/1:12,0:13:40.42:46,0,40	1/1:21,0:25:7.84:104,8,0	1/1:20,5:35:8.99:157,9,0	0/0:17,0:19:5.51:0,6,205	1/1:19,0:17:10.85:180,11,0	1/1:22,0:19:9:95,9,0	1/1:15,0:16:14.63:246,15,0	0/1:9,0:9:0:0,0,0	1/1:10,1:11:5.61:113,6,0	1/1:25,0:22:18.03:195,18,0	0/0:12,0:12:18.02:0,18,230	1/1:28,0:26:39.02:569,39,0	1/1:20,0:15:17.65:270,18,0	1/1:2,0:2:2.85:53,3,0
chr10	92920028	.	A	ATTTTT	7459.49	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=1.388;DP=543;FS=23.969;HRun=12;HaplotypeScore=118.5185;InbreedingCoeff=0.8806;MQ=62.72;MQ0=1;MQRankSum=-5.021;QD=16.58;ReadPosRankSum=-2.430;VQSLOD=0.2011;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:28:31.96:0,32,400	0/0:8,0:8:20.98:0,21,316	0/0:12,0:10:25.82:0,26,235	0/1:8,0:7:7.85:8,0,50	1/1:24,1:24:28.89:539,29,0	1/1:2,0:18:11.39:68,11,0	1/1:5,0:20:26.40:143,26,0	1/1:20,1:25:33.10:524,33,0	1/1:11,6:20:24.08:605,24,0	1/1:12,0:22:30.05:456,30,0	1/1:11,0:16:16.60:248,17,0	1/1:6,0:21:26.17:125,26,0	1/1:4,0:16:20.96:96,21,0	1/1:8,0:27:30.54:197,31,0	0/0:25,0:26:48.56:0,49,722	1/1:19,8:29:37.94:895,38,0	0/0:19,0:19:32.59:0,33,486	1/1:8,0:22:13.57:97,14,0	1/1:9,3:16:21.04:418,21,0	1/1:8,8:19:24.04:485,24,0	1/1:7,1:13:17.95:347,18,0	1/1:9,0:21:30.70:183,31,0	1/1:3,0:14:19.61:95,20,0	1/1:0,0:19:34.94:148,35,0	1/1:3,0:19:32:157,32,0	1/1:17,2:24:31.85:567,32,0	1/1:8,11:23:31.24:667,31,0	1/1:3,6:11:18.02:395,18,0
chr10	92920278	.	AACACACAC	A	3679.41	PASS	AB=0.857;AC=34;AF=0.654;AN=52;BaseQRankSum=-0.853;DP=668;FS=4.463;HRun=0;HaplotypeScore=166.8648;InbreedingCoeff=0.2428;MQ=57.97;MQ0=22;MQRankSum=-1.511;QD=7.80;ReadPosRankSum=-0.350;VQSLOD=2.3405;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:33:93.06:128,0,93	0/0:5,0:5:12.47:0,12,200	./.	./.	1/1:9,10:19:2.57:16,3,0	1/1:11,0:26:12.04:210,12,0	0/1:18,0:18:0:0,0,0	1/1:29,0:28:5.94:42,6,0	1/1:7,16:23:11.25:154,11,0	0/1:19,1:23:84.40:372,0,84	0/1:3,9:13:0:0,0,0	1/1:18,0:17:3.90:77,4,0	1/1:12,1:12:10.16:103,10,0	0/0:8,0:20:3.37:0,3,17	0/0:23,0:23:30.09:0,30,662	1/1:11,16:28:8:101,8,0	0/0:33,0:51:38.93:0,39,609	1/1:12,13:25:2.81:106,3,0	1/1:11,0:11:6.02:73,6,0	1/1:21,0:23:14.81:336,15,0	0/1:40,0:43:10.57:482,0,11	0/0:12,0:17:2.97:0,3,20	0/1:11,0:19:53:77,0,53	0/1:29,0:27:6.90:62,0,7	0/1:20,0:21:29.57:139,0,30	1/1:20,3:24:33.08:645,33,0	1/1:11,2:16:8.50:335,8,0	1/1:3,4:7:9.03:224,9,0
chr10	92921288	.	GAAA	G	7421.84	PASS	AB=0.619;AC=43;AF=0.768;AN=56;BaseQRankSum=2.486;DP=547;FS=4.418;HRun=13;HaplotypeScore=101.6019;InbreedingCoeff=0.8607;MQ=78.75;MQ0=4;MQRankSum=-1.280;QD=17.84;ReadPosRankSum=4.024;VQSLOD=3.8975;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:16:24.17:0,24,200	0/0:11,0:13:36.08:0,36,617	0/0:26,0:16:26.81:0,27,340	0/0:28,0:21:2.79:0,3,267	1/1:4,12:17:22.30:272,22,0	1/1:1,17:19:40.42:488,40,0	1/1:3,17:20:39.06:452,39,0	1/1:7,27:36:79.01:938,79,0	1/1:5,9:14:21.02:255,21,0	1/1:8,8:17:20.87:237,21,0	0/1:5,8:13:14.01:66,0,14	1/1:2,0:22:43.77:267,44,0	1/1:3,0:12:29.41:179,29,0	1/1:3,0:19:42.12:252,42,0	0/0:16,0:18:48.16:0,48,894	1/1:5,22:27:57.06:660,57,0	0/0:26,0:29:72.70:0,73,1273	1/1:3,0:23:49.63:296,50,0	1/1:3,16:19:42.05:498,42,0	1/1:0,11:11:29.98:328,30,0	1/1:5,9:14:19.29:251,19,0	1/1:4,0:17:25.71:145,26,0	1/1:1,0:15:22.36:133,22,0	1/1:4,1:25:41.22:268,41,0	1/1:5,0:17:22.44:141,22,0	1/1:7,10:17:26.32:325,26,0	1/1:4,21:25:51.12:620,51,0	1/1:4,13:17:32.91:351,33,0
chr10	92921309	.	A	AT	277.09	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.266;DP=610;FS=3.553;HRun=8;HaplotypeScore=112.7595;InbreedingCoeff=0.8739;MQ=78.64;MQ0=4;MQRankSum=0.012;QD=15.39;ReadPosRankSum=-0.903;VQSLOD=3.2063;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:18:33.09:372,33,0	0/0:14,0:14:35.99:0,36,321	0/0:30,0:20:6.23:0,6,192	0/0:23,1:18:27.11:0,27,232	0/0:21,0:21:45.02:0,45,411	0/0:26,0:26:66.03:0,66,604	0/0:27,0:27:66.04:0,66,604	0/0:40,0:40:83.96:0,84,757	0/0:14,0:14:36:0,36,325	0/0:17,0:17:42.01:0,42,384	0/0:12,0:12:30.02:0,30,274	0/0:23,0:23:45:0,45,408	0/0:13,0:13:33.01:0,33,302	0/0:25,0:25:75.04:0,75,686	0/0:24,0:24:63.02:0,63,576	0/0:30,0:29:75.02:0,75,682	0/0:23,0:23:63.03:0,63,577	0/0:22,0:22:54.02:0,54,494	0/0:27,0:27:69.04:0,69,631	0/0:22,0:22:59.96:0,60,539	0/0:12,0:12:30.01:0,30,275	0/0:21,0:21:51.02:0,51,466	0/0:19,0:19:45.02:0,45,412	0/0:20,0:20:28.17:0,28,392	0/0:21,0:21:48.02:0,48,439	0/0:25,0:25:72.03:0,72,655	0/0:21,0:21:45.02:0,45,412	0/0:18,1:19:10.88:0,11,350
chr10	92922079	.	CAG	C	2350.35	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.873;DP=652;FS=3.331;HRun=0;HaplotypeScore=74.8374;InbreedingCoeff=0.9992;MQ=85.75;MQ0=0;MQRankSum=-5.969;QD=43.52;ReadPosRankSum=1.294;VQSLOD=4.9499;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,54:54:99:2445,151,0	0/0:11,0:11:33.11:0,33,642	0/0:17,0:17:51.17:0,51,985	0/0:25,0:25:75.25:0,75,1434	0/0:34,0:34:99:0,99,2011	0/0:19,0:19:57.20:0,57,1147	0/0:19,0:19:57.20:0,57,1158	0/0:44,0:44:99:0,129,2583	0/0:25,0:25:75.25:0,75,1491	0/0:22,0:22:66.23:0,66,1327	0/0:13,0:13:39.12:0,39,757	0/0:23,0:23:69.22:0,69,1341	0/0:21,0:21:63.22:0,63,1270	0/0:18,0:18:54.19:0,54,1093	0/0:19,0:19:57.18:0,57,1121	0/0:19,0:19:57.20:0,57,1146	0/0:25,0:25:75.26:0,75,1522	0/0:36,0:36:99:0,108,2141	0/0:25,0:25:75.25:0,75,1467	0/0:12,0:12:36.12:0,36,722	0/0:28,0:28:84.29:0,84,1665	0/0:16,0:16:45.15:0,45,914	0/0:24,0:24:72.25:0,72,1446	0/0:22,0:22:63.22:0,63,1279	0/0:18,0:18:54.19:0,54,1091	0/0:39,0:39:99:0,117,2253	0/0:11,0:11:33.11:0,33,667	0/0:13,0:13:39.13:0,39,781
chr10	92923628	.	G	GCC	1163.77	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=-6.032;DP=364;FS=19.209;HRun=9;HaplotypeScore=63.8205;InbreedingCoeff=0.8367;MQ=78.34;MQ0=2;MQRankSum=-2.001;QD=16.63;ReadPosRankSum=1.382;VQSLOD=0.4587;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,6:12:2.98:0,3,32	0/0:4,0:4:6:0,6,64	0/0:14,0:14:23.25:0,23,230	0/0:12,0:10:18.01:0,18,177	0/0:8,0:8:20.98:0,21,214	0/0:13,0:13:32.99:0,33,347	0/0:30,0:30:72:0,72,749	0/0:24,0:24:32.80:0,33,345	0/0:14,0:14:36.04:0,36,375	0/0:8,0:8:15:0,15,159	0/0:8,0:8:11.92:0,12,127	1/1:5,8:14:14.54:194,15,0	1/1:4,0:4:9:79,9,0	1/1:2,7:10:14.54:193,15,0	0/0:9,0:9:18.04:0,18,192	0/0:15,0:15:39.04:0,39,415	0/0:36,0:36:93.19:0,93,989	1/1:3,11:19:39.57:458,40,0	0/0:13,0:13:26.95:0,27,277	0/0:4,0:4:9.02:0,9,96	0/0:25,0:25:69.13:0,69,717	./.	1/1:4,0:5:2.50:9,2,0	1/1:0,15:15:26.58:378,27,0	1/1:2,0:2:3:27,3,0	0/0:10,0:10:17.94:0,18,183	0/0:18,0:18:45.11:0,45,478	0/0:12,0:12:14.96:0,15,160
chr10	92923846	.	A	AC	12659.57	PASS	AB=0.859;AC=54;AF=0.964;AN=56;BaseQRankSum=-5.325;DP=358;FS=0.000;HRun=5;HaplotypeScore=37.6095;InbreedingCoeff=-0.0451;MQ=73.68;MQ0=1;MQRankSum=-4.299;QD=35.36;ReadPosRankSum=2.854;VQSLOD=4.3156;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:32:72.24:1079,72,0	1/1:0,6:6:18.01:244,18,0	0/1:10,3:9:66.22:66,0,78	0/1:17,2:15:78.13:78,0,105	1/1:1,5:6:18.06:266,18,0	1/1:0,8:8:24.08:359,24,0	1/1:0,16:16:42.14:629,42,0	1/1:0,22:22:63.17:892,63,0	1/1:1,17:18:48.16:718,48,0	1/1:1,9:10:27.09:405,27,0	1/1:0,4:4:12.04:180,12,0	1/1:0,12:12:12.04:180,12,0	1/1:0,9:9:24.08:359,24,0	1/1:0,14:14:39.13:584,39,0	1/1:0,11:11:21.07:315,21,0	1/1:0,10:10:30.10:450,30,0	1/1:0,7:7:21.07:315,21,0	1/1:0,10:10:27.09:405,27,0	1/1:0,16:16:48.11:655,48,0	1/1:1,5:6:15.05:224,15,0	1/1:2,34:36:96.30:1416,96,0	1/1:0,5:5:15.05:225,15,0	1/1:0,6:6:8.90:134,9,0	1/1:0,20:20:57.19:854,57,0	1/1:0,10:10:24.08:349,24,0	1/1:0,10:10:30.08:427,30,0	1/1:0,16:16:45.15:674,45,0	1/1:0,5:5:12.04:179,12,0
chr10	92927233	.	GC	G	168.36	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=2.876;DP=275;FS=5.527;HRun=2;HaplotypeScore=35.6191;InbreedingCoeff=0.4684;MQ=78.02;MQ0=1;MQRankSum=-0.329;QD=3.74;ReadPosRankSum=3.556;VQSLOD=0.5610;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:20.92:0,21,167	0/0:3,0:3:8.33:0,8,52	0/1:11,0:9:3.62:4,0,77	0/1:15,0:14:42.64:43,0,81	0/0:11,0:11:11.59:0,12,84	1/1:7,0:7:8.81:60,9,0	1/1:9,3:12:26.61:185,27,0	0/0:6,0:6:17.91:0,18,142	0/0:10,0:10:26.67:0,27,238	0/0:14,0:14:35.75:0,36,260	0/0:11,0:11:14.85:0,15,104	0/0:14,1:15:26.49:0,26,209	0/0:5,0:5:11.97:0,12,99	0/0:3,0:3:3:0,3,27	0/0:9,0:9:27.01:0,27,242	0/0:12,0:12:20.97:0,21,182	0/0:17,0:17:34.67:0,35,299	0/0:14,0:14:26.92:0,27,223	0/0:10,0:10:20.53:0,21,157	0/0:4,0:4:5.93:0,6,40	0/0:13,0:13:26.90:0,27,216	0/0:10,0:10:23.78:0,24,167	0/0:5,0:5:6.82:0,7,48	0/0:21,0:21:47.93:0,48,381	0/0:9,0:9:11.70:0,12,99	0/0:11,0:11:26.77:0,27,194	0/0:9,0:9:17.93:0,18,144	0/0:1,0:1:2.97:0,3,20
chr10	92927246	.	GGGGA	G	2238.38	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=-4.097;DP=233;FS=3.174;HRun=0;HaplotypeScore=41.0163;InbreedingCoeff=0.5149;MQ=78.98;MQ0=1;MQRankSum=-0.351;QD=12.37;ReadPosRankSum=-5.002;VQSLOD=1.2249;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:10:35.34:79,0,35	0/0:3,0:3:9.03:0,9,184	0/0:11,0:9:20.96:0,21,234	0/0:13,0:12:27.01:0,27,344	1/1:6,0:6:5.92:39,6,0	1/1:6,0:6:15:128,15,0	1/1:10,1:11:26.89:230,27,0	1/1:7,0:7:11.99:106,12,0	1/1:13,0:13:1.08:93,1,0	1/1:6,0:6:8.96:68,9,0	0/1:3,0:3:9.07:43,0,9	1/1:10,1:11:29.81:239,30,0	1/1:6,0:6:17.98:149,18,0	1/1:7,1:8:20.96:173,21,0	0/0:6,0:6:16.80:0,17,229	0/1:10,0:10:41.12:50,0,41	0/0:10,0:10:24.07:0,24,464	1/1:15,1:16:18.97:161,19,0	1/1:8,0:8:5.98:52,6,0	1/1:5,0:5:11.99:99,12,0	0/0:9,0:9:0:0,0,0	1/1:6,0:6:0.47:1,0,0	0/1:3,0:3:0.23:0,0,0	1/1:21,4:25:49.63:429,50,0	1/1:0,7:7:0.47:1,0,0	1/1:3,0:3:9:79,9,0	1/1:9,0:9:21.34:160,21,0	1/1:2,0:2:4.25:28,4,0
chr10	92927247	.	GGGA	G	2603.56	PASS	AC=44;AF=0.815;AN=54;BaseQRankSum=-2.771;DP=234;FS=0.860;HRun=0;HaplotypeScore=36.8449;InbreedingCoeff=0.7587;MQ=80.54;MQ0=1;MQRankSum=-2.032;QD=14.38;ReadPosRankSum=-3.495;VQSLOD=2.2673;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:8.88:174,9,0	0/0:3,0:3:9.03:0,9,143	0/0:12,0:10:23.78:0,24,216	0/0:13,0:12:26.90:0,27,251	1/1:0,6:6:5.92:39,6,0	1/1:6,0:6:15:128,15,0	1/1:12,0:12:32.89:262,33,0	1/1:7,0:7:11.99:106,12,0	1/1:12,0:12:25.37:190,25,0	1/1:1,5:6:8.96:68,9,0	1/1:3,0:3:5.58:52,6,0	1/1:12,0:12:32.80:255,33,0	1/1:6,0:6:17.79:139,18,0	1/1:8,0:8:20.96:173,21,0	0/0:8,0:8:21.86:0,22,233	1/1:9,0:9:15.80:104,16,0	0/0:10,0:10:24.06:0,24,368	1/1:15,1:16:29.57:235,30,0	1/1:7,0:7:6:52,6,0	1/1:5,0:5:11.99:100,12,0	./.	1/1:6,0:6:0.47:1,0,0	1/1:2,1:3:0.28:1,0,0	1/1:24,0:24:50.30:406,50,0	1/1:7,0:7:0.47:1,0,0	1/1:3,0:3:9:79,9,0	1/1:9,0:9:21.34:160,21,0	1/1:2,0:2:5.97:46,6,0
chr10	92927248	.	GGA	G	2795.03	PASS	AC=44;AF=0.815;AN=54;BaseQRankSum=-2.796;DP=232;FS=0.904;HRun=0;HaplotypeScore=32.9655;InbreedingCoeff=0.7962;MQ=80.95;MQ0=1;MQRankSum=-1.692;QD=15.53;ReadPosRankSum=-3.135;VQSLOD=2.5533;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:31.32:235,31,0	0/0:3,0:3:8.99:0,9,104	0/0:12,0:10:22.64:0,23,195	0/0:12,0:12:26.88:0,27,219	1/1:6,0:6:5.92:39,6,0	1/1:6,0:6:15:128,15,0	1/1:12,0:12:32.84:250,33,0	1/1:6,0:6:15:133,15,0	1/1:12,0:12:25.43:193,25,0	1/1:6,0:6:8.96:68,9,0	1/1:3,0:3:8.95:71,9,0	1/1:12,0:12:32.78:249,33,0	1/1:6,0:6:16.54:130,17,0	1/1:8,0:8:20.96:173,21,0	0/0:8,0:8:20.90:0,21,194	1/1:9,0:9:23.95:199,24,0	0/0:10,0:10:23.98:0,24,269	1/1:14,0:15:29.56:230,30,0	1/1:8,0:8:9:77,9,0	1/1:5,0:5:11.99:100,12,0	./.	1/1:0,6:6:0.47:1,0,0	1/1:3,0:3:0.47:1,0,0	1/1:23,0:23:49.24:391,49,0	1/1:7,0:7:0.47:1,0,0	1/1:3,0:3:9:79,9,0	1/1:9,0:9:21.34:160,21,0	1/1:3,0:3:8.21:56,8,0
chr10	92929397	.	GACAGACAGACAGACCC	G	9914.43	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=11.090;DP=585;FS=3.717;HRun=0;HaplotypeScore=223.9553;InbreedingCoeff=0.8007;MQ=61.02;MQ0=8;MQRankSum=-9.615;QD=23.33;ReadPosRankSum=2.262;VQSLOD=3.7610;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:20.83:225,21,0	0/0:8,0:8:18.06:0,18,1016	0/0:51,0:28:54.29:0,54,1390	0/0:40,0:26:50.63:0,51,1501	1/1:6,15:21:12.81:424,13,0	1/1:13,0:13:8.70:107,9,0	1/1:24,0:24:15.05:185,15,0	1/1:15,0:15:12.04:286,12,0	1/1:9,21:30:42.14:1878,42,0	1/1:6,13:19:36.12:1090,36,0	1/1:2,8:10:0.94:2,1,0	1/1:23,0:23:33.57:405,34,0	1/1:21,0:21:29.09:359,29,0	1/1:26,0:26:42.10:491,42,0	0/0:11,0:11:33.11:0,33,2099	1/1:2,9:11:18.06:810,18,0	0/0:50,0:50:99:0,123,7063	1/1:26,0:25:15.52:182,16,0	1/1:7,7:14:21.02:314,21,0	1/1:0,2:2:6.02:179,6,0	1/1:6,26:32:6.02:262,6,0	1/1:14,0:14:15.05:181,15,0	1/1:8,0:8:6.02:83,6,0	1/1:23,0:23:11.63:145,12,0	1/1:11,0:11:15.05:180,15,0	1/1:7,20:27:57.19:1720,57,0	1/1:4,9:13:2.95:134,3,0	1/1:2,3:5:6.02:270,6,0
chr10	92929401	.	GACAGACAGACCC	G	12890.96	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=11.392;DP=570;FS=6.107;HRun=0;HaplotypeScore=177.3637;InbreedingCoeff=0.8115;MQ=59.22;MQ0=9;MQRankSum=-9.563;QD=31.44;ReadPosRankSum=2.427;VQSLOD=3.7789;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:35:33.11:929,33,0	0/0:8,0:8:18.06:0,18,821	0/0:52,0:27:54.04:0,54,1443	0/0:41,0:26:51.02:0,51,1458	1/1:20,0:20:12.06:278,12,0	1/1:2,11:13:12.04:381,12,0	1/1:1,24:25:15.05:542,15,0	1/1:16,0:16:27.04:336,27,0	1/1:28,0:28:42.14:1198,42,0	1/1:19,0:19:35.93:653,36,0	1/1:10,0:10:0.94:2,1,0	1/1:4,20:24:35.88:1227,36,0	1/1:2,18:20:36.12:1171,36,0	1/1:3,23:26:42.14:1504,42,0	0/0:12,0:12:36.12:0,36,1820	1/1:11,0:11:18.06:519,18,0	0/0:47,0:47:99:0,126,5969	1/1:3,18:21:18.06:601,18,0	1/1:11,0:11:20.98:217,21,0	1/1:2,0:2:6.02:110,6,0	1/1:30,0:29:6.02:165,6,0	1/1:2,12:14:15.05:542,15,0	1/1:4,5:9:6.02:217,6,0	1/1:5,20:25:11.63:362,12,0	1/1:0,9:9:15.05:542,15,0	1/1:27,0:27:57.09:1137,57,0	1/1:11,0:11:2.61:86,3,0	1/1:3,0:4:6.02:173,6,0
chr10	92929409	.	GACCC	G	5174.21	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=12.471;DP=534;FS=5.639;HRun=0;HaplotypeScore=143.0607;InbreedingCoeff=0.6478;MQ=56.76;MQ0=9;MQRankSum=-9.274;QD=13.95;ReadPosRankSum=3.840;VQSLOD=3.9118;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:33.09:374,33,0	0/0:7,0:7:21.07:0,21,470	0/0:50,4:27:62.45:0,62,1214	0/0:42,0:27:53.32:0,53,1100	1/1:17,0:17:12.87:115,13,0	1/1:12,0:12:12.03:133,12,0	1/1:24,0:24:15.04:162,15,0	1/1:6,10:16:29.02:448,29,0	1/1:23,0:23:42.07:415,42,0	1/1:16,0:16:35.09:375,35,0	0/1:10,0:10:0:1,0,0	1/1:20,0:20:35.98:393,36,0	1/1:18,0:19:36.08:385,36,0	1/1:24,0:24:42.11:459,42,0	0/0:14,0:14:42.14:0,42,1002	1/1:11,0:11:18.04:183,18,0	0/0:46,0:46:99:0,135,3188	0/1:19,0:18:17.60:180,0,18	0/1:9,0:9:17.38:176,0,17	1/1:2,0:2:5.93:54,6,0	1/1:27,0:26:5.82:57,6,0	1/1:12,0:12:15.04:162,15,0	1/1:7,0:7:6.02:65,6,0	1/1:23,0:23:11.74:134,12,0	1/1:9,0:9:15.04:162,15,0	1/1:24,0:24:56.98:649,57,0	1/1:10,0:10:2.92:30,3,0	1/1:4,0:4:6.01:61,6,0
chr10	92929770	.	T	TG	290.77	PASS	AB=0.900;AC=3;AF=0.054;AN=56;BaseQRankSum=-4.982;DP=412;FS=2.298;HRun=8;HaplotypeScore=47.6707;InbreedingCoeff=0.5375;MQ=77.58;MQ0=0;MQRankSum=-1.773;QD=11.18;ReadPosRankSum=-0.256;VQSLOD=1.8697;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:33.10:381,33,0	0/0:9,0:9:21:0,21,192	0/0:11,0:11:17.99:0,18,157	0/0:17,0:18:23.49:0,23,194	0/0:16,0:16:35.92:0,36,318	0/0:14,0:14:35.99:0,36,324	0/0:20,0:20:54:0,54,489	0/0:21,0:21:42:0,42,380	0/1:8,1:9:13.62:14,0,139	0/0:21,0:21:51:0,51,460	0/0:7,0:7:17.98:0,18,155	0/0:17,0:17:48.03:0,48,439	0/0:14,0:14:39.02:0,39,356	0/0:23,0:23:57.01:0,57,521	0/0:16,0:16:48.03:0,48,439	0/0:12,0:12:30:0,30,275	0/0:18,0:18:51:0,51,462	0/0:16,0:16:45.02:0,45,412	0/0:12,1:13:1.38:0,1,259	0/0:7,0:7:17.97:0,18,164	0/0:18,1:19:16.42:0,16,405	0/0:11,0:11:23.94:0,24,209	0/0:5,0:5:12:0,12,110	0/0:18,0:18:48.03:0,48,439	0/0:12,0:12:30.02:0,30,274	0/0:18,0:18:48.02:0,48,439	0/0:19,0:18:50.96:0,51,454	0/0:11,0:11:30.01:0,30,275
chr10	92930896	.	GA	G	9462.31	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=13.510;DP=734;FS=0.910;HRun=2;HaplotypeScore=118.0511;InbreedingCoeff=0.9999;MQ=86.70;MQ0=0;MQRankSum=-2.042;QD=35.05;ReadPosRankSum=4.424;VQSLOD=4.5078;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:99:1284,99,0	0/0:14,0:14:42.14:0,42,629	0/0:21,0:21:63.19:0,63,911	0/0:33,0:33:95.83:0,96,1325	0/0:34,0:34:93.26:0,93,1297	1/1:0,21:21:48.16:623,48,0	1/1:1,25:26:66.21:857,66,0	0/0:29,0:29:84.26:0,84,1191	0/0:25,0:25:75.25:0,75,1120	0/0:39,0:39:99:0,111,1623	0/0:21,0:20:54.18:0,54,806	1/1:0,24:24:63.20:818,63,0	1/1:0,25:25:69.22:896,69,0	1/1:0,29:29:81.26:1051,81,0	0/0:28,0:28:81.27:0,81,1213	0/0:27,0:27:78.24:0,78,1130	0/0:33,0:33:96.33:0,96,1438	1/1:0,22:22:57.19:740,57,0	0/0:23,0:23:69.19:0,69,947	0/0:27,0:27:78.26:0,78,1151	0/0:33,0:33:99:0,99,1474	1/1:0,25:25:75.24:974,75,0	1/1:0,11:11:30.10:389,30,0	1/1:1,32:33:84.27:1090,84,0	1/1:0,20:20:57.19:740,57,0	0/0:29,0:29:84.28:0,84,1241	0/0:33,0:32:99:0,99,1481	0/0:15,0:15:45.11:0,45,649
chr10	92931672	.	TG	T	5446.88	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=12.606;DP=457;FS=4.585;HRun=1;HaplotypeScore=66.5159;InbreedingCoeff=0.9713;MQ=86.19;MQ0=0;MQRankSum=-3.486;QD=38.63;ReadPosRankSum=3.758;VQSLOD=5.5877;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.28:0,93,1436	0/0:8,0:8:24.08:0,24,379	0/0:14,0:14:41.93:0,42,577	0/0:21,0:21:56.60:0,57,777	0/0:14,0:14:42.06:0,42,640	1/1:0,13:13:36.12:503,36,0	1/1:0,16:16:48.16:671,48,0	0/0:25,0:25:72.20:0,72,1104	0/0:15,0:15:45.14:0,45,696	0/0:14,0:14:42.14:0,42,671	0/0:13,0:13:39.13:0,39,623	1/1:0,24:24:69.23:956,69,0	1/1:0,16:16:48.16:659,48,0	1/1:0,18:18:51.17:711,51,0	0/0:22,0:22:66.23:0,66,1054	0/0:11,0:11:30.10:0,30,479	0/0:32,0:32:96.33:0,96,1530	1/1:1,5:6:18.04:233,18,0	0/0:15,0:15:45.14:0,45,697	0/0:7,0:7:21.07:0,21,326	0/0:45,0:45:99:0,127,1889	1/1:0,13:13:33.11:456,33,0	1/1:0,12:12:33.11:461,33,0	1/1:0,13:13:33.11:461,33,0	1/1:0,10:10:24.08:335,24,0	0/0:18,0:18:54.18:0,54,827	0/0:8,0:8:24.08:0,24,383	0/0:1,0:1:3.01:0,3,48
chr10	92931745	.	T	TG	8513.75	PASS	AB=0.750;AC=45;AF=0.804;AN=56;BaseQRankSum=8.688;DP=420;FS=3.950;HRun=2;HaplotypeScore=77.9350;InbreedingCoeff=0.8734;MQ=88.44;MQ0=0;MQRankSum=-4.750;QD=27.03;ReadPosRankSum=2.820;VQSLOD=4.6721;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,23:29:64.55:786,65,0	0/0:10,0:10:30.07:0,30,365	0/0:20,0:20:45.53:0,46,605	0/0:22,0:22:42.18:0,42,638	1/1:3,6:9:21.07:265,21,0	1/1:3,5:8:18.04:210,18,0	1/1:2,18:20:54.17:667,54,0	1/1:8,17:25:38.86:475,39,0	1/1:4,10:14:32.60:403,33,0	1/1:5,11:16:36.98:429,37,0	1/1:0,8:9:23.78:296,24,0	1/1:3,14:17:42.11:498,42,0	1/1:2,11:13:36.06:428,36,0	1/1:1,8:9:23.10:296,23,0	0/0:23,0:23:66.21:0,66,853	1/1:1,13:15:36.11:441,36,0	0/0:30,0:30:87.28:0,87,1124	1/1:0,18:18:39.12:477,39,0	1/1:3,7:10:21.07:268,21,0	1/1:2,5:7:8.68:73,9,0	1/1:8,18:26:53:665,53,0	1/1:4,7:11:23.47:276,23,0	1/1:5,2:7:12.89:118,13,0	1/1:1,9:10:29.12:336,29,0	1/1:4,9:13:33.06:372,33,0	1/1:5,9:14:24.08:302,24,0	1/1:1,11:11:33.08:401,33,0	0/1:2,1:3:9.96:31,0,10
chr10	92932779	.	GCCCTACC	G	13725.10	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=16.681;DP=674;FS=0.000;HRun=0;HaplotypeScore=200.9703;InbreedingCoeff=0.9992;MQ=84.99;MQ0=0;MQRankSum=-17.716;QD=51.02;ReadPosRankSum=-0.866;VQSLOD=4.4117;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,135,4991	0/0:10,0:10:27.09:0,27,970	0/0:27,0:27:66.23:0,66,2337	0/0:24,0:24:49.11:0,49,1915	1/1:6,28:34:66.23:1625,66,0	0/0:20,0:20:48.16:0,48,1778	0/0:26,0:26:69.22:0,69,2448	1/1:5,16:21:48.14:1083,48,0	1/1:3,22:25:60.20:1477,60,0	1/1:5,18:23:54.18:1330,54,0	1/1:5,13:18:30.10:739,30,0	0/0:23,0:23:57.18:0,57,2079	0/0:29,0:29:81.28:0,81,3052	0/0:24,0:24:69.23:0,69,2563	0/0:29,0:29:75.26:0,75,2903	1/1:6,21:27:54.18:1327,54,0	0/0:28,0:28:81.28:0,81,3070	0/0:23,0:23:69.24:0,69,2636	1/1:3,14:17:39.13:960,39,0	1/1:3,20:23:48.16:1182,48,0	1/1:5,24:29:51.17:1247,51,0	0/0:34,0:34:93.32:0,93,3599	0/0:19,0:19:54.19:0,54,2013	0/0:21,0:21:63.22:0,63,2401	0/0:16,0:16:45.15:0,45,1706	1/1:7,13:20:39.13:908,39,0	1/1:4,19:23:54.19:1329,54,0	1/1:0,9:9:21.07:517,21,0
chr10	92934339	.	T	TTCTCTC	4434.92	PASS	AB=1.000;AC=45;AF=0.833;AN=54;BaseQRankSum=0.472;DP=635;FS=0.791;HRun=0;HaplotypeScore=165.6477;InbreedingCoeff=0.5339;MQ=62.48;MQ0=10;MQRankSum=-3.658;QD=7.99;ReadPosRankSum=-1.051;VQSLOD=3.6346;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:12,0:12:9.91:0,10,153	0/1:33,0:20:0:0,0,0	0/1:41,0:21:0:0,0,0	1/1:26,0:27:23.14:293,23,0	1/1:15,0:15:11.98:99,12,0	1/1:25,0:24:14.87:111,15,0	1/1:36,0:35:26.03:176,26,0	1/1:26,1:28:35.69:558,36,0	1/1:9,11:19:33.06:530,33,0	1/1:8,8:17:6.02:74,6,0	1/1:13,0:18:13.51:128,14,0	1/1:10,0:11:2.37:24,2,0	1/1:12,0:13:6.01:59,6,0	0/0:20,0:21:27.09:0,27,484	1/1:7,23:33:17.23:324,17,0	0/0:24,0:24:42.12:0,42,657	0/1:12,0:13:40.90:50,0,41	1/1:19,1:18:11.89:165,12,0	1/1:23,0:23:26.41:265,26,0	1/1:22,0:23:11.69:114,12,0	1/1:15,0:15:3:25,3,0	1/1:6,0:10:2.99:24,3,0	1/1:14,0:16:2.99:24,3,0	1/1:20,0:23:9.02:110,9,0	1/1:11,13:26:48.09:735,48,0	1/1:14,11:28:20.98:417,21,0	1/1:13,17:35:5.36:131,5,0
chr10	92934381	.	CTCTCTCTCTG	C	3871.63	PASS	AB=1.000;AC=17;AF=0.315;AN=54;BaseQRankSum=0.465;DP=478;FS=13.327;HRun=0;HaplotypeScore=175.4194;InbreedingCoeff=0.8448;MQ=43.33;MQ0=24;MQRankSum=-0.699;QD=33.38;ReadPosRankSum=-2.131;VQSLOD=2.0047;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:13.64:0,14,140	0/0:10,0:10:18.53:0,19,722	0/0:23,0:4:12.03:0,12,146	0/0:28,0:6:14.87:0,15,175	0/0:19,0:19:9.03:0,9,166	1/1:10,0:10:21.06:381,21,0	0/1:10,0:9:13.73:358,0,14	0/0:21,0:15:29.86:0,30,350	0/0:26,0:25:35.56:0,36,774	0/0:21,0:21:57.08:0,57,1072	0/0:10,0:10:6.02:0,6,163	1/1:13,4:17:39.13:768,39,0	1/1:13,1:14:30.48:597,30,0	1/1:11,1:11:26.94:476,27,0	0/0:21,0:21:57.18:0,57,1792	0/0:28,0:27:30.57:0,31,655	0/0:25,0:25:63.19:0,63,2091	1/1:8,1:8:11.93:251,12,0	0/0:14,0:12:16.89:0,17,299	0/0:11,0:9:9.03:0,9,172	0/0:16,0:16:12.04:0,12,256	./.	1/1:10,2:12:13.33:209,13,0	1/1:18,2:20:9.46:350,9,0	1/1:9,3:12:24.87:481,25,0	0/0:22,0:22:61.45:0,61,1301	0/0:20,0:19:27.08:0,27,619	0/0:25,0:23:24.51:0,25,441
chr10	92934397	.	CTG	C	3626.11	PASS	AB=0.944;AC=25;AF=0.446;AN=56;BaseQRankSum=-3.145;DP=520;FS=39.483;HRun=0;HaplotypeScore=154.2750;InbreedingCoeff=0.8827;MQ=44.59;MQ0=24;MQRankSum=0.620;QD=16.04;ReadPosRankSum=1.377;VQSLOD=1.5148;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:17:7.32:7,0,26	0/0:9,0:9:17.96:0,18,214	0/0:32,0:5:13.43:0,13,135	0/0:42,0:11:12.91:0,13,147	1/1:10,6:16:14.85:184,15,0	0/0:11,0:11:20.77:0,21,151	0/0:17,0:16:34.62:0,35,270	1/1:14,1:12:23.91:198,24,0	1/1:5,16:20:35.96:404,36,0	1/1:8,11:19:45.11:538,45,0	1/1:4,5:9:5.51:73,6,0	0/0:18,0:18:38.62:0,39,255	0/0:19,0:19:33.50:0,34,249	0/0:16,0:15:30.95:0,31,211	0/0:25,0:25:35.91:0,36,646	1/1:15,8:22:36.07:416,36,0	0/0:26,0:26:37.52:0,38,845	0/0:6,0:6:9.54:0,10,51	1/1:3,6:8:18.03:197,18,0	1/1:1,9:9:6.01:74,6,0	1/1:8,11:19:27.04:304,27,0	0/0:11,0:11:11.95:0,12,93	0/0:15,0:15:19.81:0,20,119	0/0:23,0:23:29.30:0,29,197	0/0:24,0:24:19.31:0,19,240	1/1:12,13:24:51.03:567,51,0	1/1:16,6:22:35.85:360,36,0	1/1:14,5:19:27.04:304,27,0
chr10	92934515	.	CTG	C	95.94	PASS	AB=0.839;AC=4;AF=0.071;AN=56;BaseQRankSum=4.030;DP=698;FS=0.000;HRun=0;HaplotypeScore=170.1575;InbreedingCoeff=0.2541;MQ=47.09;MQ0=42;MQRankSum=-0.552;QD=1.33;ReadPosRankSum=-1.630;VQSLOD=1.6639;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,9:18:25:169,0,25	0/0:15,0:15:14.32:0,14,417	1/1:34,0:3:2.47:11,2,0	0/0:51,0:6:6.11:0,6,58	0/0:21,0:21:33.01:0,33,439	0/0:16,0:16:17.86:0,18,222	0/0:34,0:31:35.85:0,36,512	0/0:41,0:34:98.89:0,99,1100	0/0:25,0:23:45.04:0,45,703	0/0:34,0:33:80.01:0,80,1138	0/0:21,0:20:29.28:0,29,481	0/0:17,0:17:23.82:0,24,336	0/0:17,0:17:36.30:0,36,490	0/0:16,0:16:4.11:0,4,234	0/0:27,0:27:62.05:0,62,812	0/0:38,0:38:38.88:0,39,1083	0/0:25,0:25:45.16:0,45,860	0/0:13,0:13:8.47:0,8,340	0/0:22,0:10:18.03:0,18,252	0/0:9,0:9:17.62:0,18,236	0/0:31,0:32:41.44:0,41,602	0/0:24,0:24:22.73:0,23,368	0/0:21,0:20:27.27:0,27,408	0/0:27,0:27:25.33:0,25,358	0/1:19,0:19:4.02:4,0,315	0/0:42,0:42:99:0,111,1705	0/0:25,0:25:63.03:0,63,973	0/0:11,0:11:27.07:0,27,412
chr10	92934540	.	C	CCT	1906.83	PASS	AB=0.892;AC=20;AF=0.357;AN=56;BaseQRankSum=9.307;DP=629;FS=2.503;HRun=0;HaplotypeScore=159.1449;InbreedingCoeff=0.6981;MQ=49.69;MQ0=33;MQRankSum=-0.330;QD=8.01;ReadPosRankSum=-1.545;VQSLOD=3.4529;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:9.50:0,9,114	0/0:18,0:18:41.43:0,41,488	0/1:19,0:2:5.07:5,0,31	0/1:40,0:5:5.45:13,0,5	0/0:15,0:15:30.10:0,30,377	1/1:8,5:13:17.07:182,17,0	1/1:15,14:28:30.02:449,30,0	0/0:43,0:38:81.24:0,81,1000	0/0:28,0:27:54.17:0,54,661	0/0:30,0:29:77.26:0,77,858	0/0:21,0:21:50.15:0,50,586	0/1:6,3:9:48.10:133,0,48	1/1:7,6:13:17.64:199,18,0	1/1:8,5:13:11.87:143,12,0	0/0:24,0:24:50.92:0,51,637	0/0:32,0:32:49.88:0,50,555	0/0:22,0:22:34.22:0,34,648	0/1:5,2:9:8.80:133,0,9	0/0:19,0:10:25.89:0,26,305	0/0:11,0:11:23.83:0,24,278	0/0:37,0:37:45.01:0,45,559	1/1:17,11:28:16.87:243,17,0	1/1:14,6:19:18.04:225,18,0	1/1:13,9:23:5.98:70,6,0	1/1:13,9:22:20.21:314,20,0	0/0:38,0:37:92.46:0,92,1026	0/0:24,0:24:45.07:0,45,549	0/0:10,0:9:18.04:0,18,212
chr10	92934567	.	G	GTC	449.17	PASS	AB=0.950;AC=17;AF=0.304;AN=56;BaseQRankSum=7.622;DP=580;FS=3.747;HRun=0;HaplotypeScore=150.0558;InbreedingCoeff=0.7124;MQ=45.72;MQ0=19;MQRankSum=-4.520;QD=3.03;ReadPosRankSum=-2.511;VQSLOD=2.4664;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:11:0.47:0,0,1	0/0:17,0:17:36.68:0,37,406	0/0:21,0:3:1.04:0,1,5	0/0:49,0:11:4.40:0,4,55	0/0:21,0:21:23.27:0,23,255	1/1:11,1:12:4.96:40,5,0	1/1:23,2:24:14.79:172,15,0	0/0:33,0:29:63.12:0,63,718	0/0:28,0:28:36.07:0,36,427	0/0:22,0:21:37.43:0,37,460	0/0:21,0:22:45.14:0,45,556	1/1:9,1:11:15.63:141,16,0	1/1:11,0:11:20.46:172,20,0	1/1:8,3:11:2.98:22,3,0	0/0:29,0:29:72.14:0,72,879	0/0:19,0:19:35.31:0,35,384	0/0:23,0:23:54.64:0,55,666	0/0:6,0:6:1.42:0,1,34	0/0:16,0:9:21.05:0,21,248	0/0:16,0:15:24.08:0,24,299	0/0:34,0:34:48.01:0,48,585	1/1:23,0:23:2.84:15,3,0	1/1:17,0:17:2.93:23,3,0	1/1:16,0:19:3.01:30,3,0	0/1:18,1:19:0.04:0,0,0	0/0:37,0:36:65.68:0,66,930	0/0:19,0:19:18.01:0,18,194	0/0:8,0:7:12.51:0,13,151
chr10	92934585	.	G	GTC	270.75	PASS	AB=0.941;AC=18;AF=0.321;AN=56;BaseQRankSum=7.539;DP=555;FS=6.439;HRun=0;HaplotypeScore=134.8567;InbreedingCoeff=0.6791;MQ=45.55;MQ0=24;MQRankSum=-4.994;QD=1.53;ReadPosRankSum=-0.501;VQSLOD=1.9013;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:6:0.47:0,0,1	0/0:18,0:18:5.36:0,5,317	0/1:39,0:7:5.37:5,0,116	0/0:65,0:15:14.93:0,15,147	0/0:18,0:18:20.36:0,20,244	1/1:11,1:11:7.97:52,8,0	1/1:20,2:21:11.12:73,11,0	0/0:29,0:25:60.16:0,60,743	0/0:21,0:21:33.07:0,33,374	0/0:17,0:16:41.16:0,41,490	0/0:19,0:19:45.03:0,45,521	1/1:10,1:11:10.46:60,10,0	1/1:12,0:12:22.52:176,23,0	1/1:7,1:8:2.99:27,3,0	0/0:27,0:27:60.12:0,60,769	0/0:16,0:16:26.98:0,27,310	0/0:22,0:22:39.04:0,39,479	0/0:3,0:3:3.89:0,4,37	0/0:16,0:9:27:0,27,315	0/0:23,0:22:21.07:0,21,268	0/0:30,0:30:37.23:0,37,465	1/1:20,0:20:2.22:8,2,0	1/1:17,0:16:1.76:5,2,0	1/1:21,0:21:3:29,3,0	0/1:13,2:15:0.04:0,0,0	0/0:31,0:31:75.11:0,75,900	0/0:10,0:10:8.91:0,9,137	0/0:7,0:6:12.01:0,12,127
chr10	92934594	.	TCC	T	126.38	PASS	AB=0.909;AC=12;AF=0.214;AN=56;BaseQRankSum=6.655;DP=533;FS=1.480;HRun=3;HaplotypeScore=124.9612;InbreedingCoeff=0.2056;MQ=44.65;MQ0=29;MQRankSum=-5.654;QD=0.99;ReadPosRankSum=0.146;VQSLOD=-0.2907;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:5:0.49:1,0,0	0/1:16,0:15:31.09:31,0,532	0/0:42,0:8:15.77:0,16,220	0/0:68,0:16:2.76:0,3,159	0/0:17,0:17:5.46:0,5,273	0/1:10,2:11:6.40:9,0,6	0/0:16,2:17:1.55:0,2,37	0/0:30,0:24:60.64:0,61,1039	0/0:22,0:21:34.15:0,34,422	0/0:18,0:17:9.28:0,9,534	0/0:17,0:17:46.27:0,46,647	0/1:8,2:10:26.50:28,0,26	1/1:8,3:11:21.92:166,22,0	0/1:7,1:8:1.69:2,0,2	0/0:26,0:26:62.98:0,63,1077	0/1:13,0:13:5.86:6,0,371	0/0:15,0:15:42.14:0,42,724	0/0:2,0:2:6.01:0,6,80	0/0:19,0:9:4.97:0,5,282	0/0:26,0:24:20.84:0,21,320	0/0:26,0:26:38.60:0,39,608	1/1:14,3:17:0.96:7,1,0	0/1:14,2:15:0.22:0,0,14	0/1:15,4:20:0.93:1,0,16	0/0:13,2:15:1.99:0,2,6	0/0:29,0:29:57.83:0,58,886	0/0:8,0:8:9.90:0,10,140	0/0:6,0:5:11.98:0,12,159
chr10	92934600	.	CCT	C	996	PASS	AB=0.934;AC=37;AF=0.661;AN=56;BaseQRankSum=4.854;DP=501;FS=17.788;HRun=0;HaplotypeScore=114.8849;InbreedingCoeff=0.2681;MQ=45.05;MQ0=27;MQRankSum=-2.443;QD=2.75;ReadPosRankSum=1.608;VQSLOD=1.3861;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:1.25:3,1,0	0/0:16,0:15:20.97:0,21,323	0/0:37,0:8:3.48:0,3,43	0/0:60,0:15:4.26:0,4,41	1/1:17,0:17:3.01:36,3,0	0/1:11,0:11:3.49:3,0,26	1/1:19,0:19:6.32:47,6,0	0/0:25,0:20:6.46:0,6,52	0/1:19,0:18:5.89:11,0,6	1/1:17,1:17:28.66:209,29,0	0/1:13,0:12:0:0,0,0	0/1:7,0:11:21.71:22,0,30	1/1:11,0:11:18.63:82,19,0	0/1:6,0:7:0:0,0,0	0/1:23,2:25:57.82:58,0,527	1/1:12,0:11:5.72:29,6,0	0/1:15,1:16:34.41:34,0,375	1/1:2,0:2:3:25,3,0	1/1:18,0:9:11.35:77,11,0	0/1:25,0:23:0.01:0,0,0	1/1:26,1:27:16.26:157,16,0	0/1:16,0:16:0.06:0,0,0	0/1:14,1:14:0:0,0,0	1/1:19,0:20:2.78:28,3,0	0/1:14,0:15:0.01:0,0,0	1/1:25,0:25:17.28:250,17,0	1/1:6,2:8:5.62:49,6,0	1/1:6,0:5:2.92:17,3,0
chr10	92934605	.	CTCT	C	84.13	PASS	AB=0.812;AC=8;AF=0.143;AN=56;BaseQRankSum=6.455;DP=517;FS=4.785;HRun=0;HaplotypeScore=130.9030;InbreedingCoeff=0.1234;MQ=44.23;MQ0=27;MQRankSum=-6.564;QD=0.63;ReadPosRankSum=1.557;VQSLOD=2.3755;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:1.55:4,2,0	0/0:16,0:15:39.03:0,39,723	0/0:33,0:5:11.47:0,11,140	0/1:61,0:16:2.90:3,0,216	0/0:20,0:20:17.46:0,17,179	0/0:8,5:12:0.75:0,1,58	0/0:17,3:19:12.24:0,12,95	0/0:20,0:15:36.99:0,37,498	0/0:19,0:18:11.42:0,11,163	0/0:19,0:18:28.29:0,28,287	0/0:10,0:9:17.92:0,18,216	0/1:11,3:14:37.45:37,0,94	0/1:4,9:13:22.26:126,0,22	0/0:5,3:8:6.74:0,7,39	0/0:29,0:29:77.63:0,78,1376	0/0:15,0:14:11.02:0,11,152	0/0:14,0:14:35.70:0,36,712	0/0:3,0:3:9.01:0,9,99	0/0:18,0:9:20.13:0,20,251	0/0:28,0:26:14.35:0,14,146	0/0:27,0:27:29.07:0,29,304	0/0:12,3:15:5.40:0,5,54	0/0:12,3:14:2.94:0,3,20	0/1:20,4:25:11.24:11,0,18	1/1:12,4:16:1.82:11,2,0	0/0:26,0:26:52.72:0,53,479	0/0:8,0:8:9.58:0,10,94	0/0:6,0:5:4.73:0,5,73
chr10	92934615	.	CTCTCTCTCTG	C	1336.19	PASS	AB=0.969;AC=24;AF=0.429;AN=56;BaseQRankSum=2.450;DP=526;FS=11.707;HRun=0;HaplotypeScore=171.9035;InbreedingCoeff=0.1122;MQ=49.08;MQ0=29;MQRankSum=-0.346;QD=3.57;ReadPosRankSum=-0.764;VQSLOD=1.9050;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:1.58:0,2,46	0/0:14,0:13:28.32:0,28,960	0/1:32,0:7:0.65:1,0,44	0/1:57,0:13:1.40:1,0,23	0/1:20,0:20:4.48:19,0,4	0/1:19,0:18:2.27:2,0,106	0/1:20,0:19:4.92:5,0,104	0/1:16,0:11:42.51:51,0,43	1/1:18,0:17:6:59,6,0	0/1:9,13:21:11.02:474,0,11	0/1:12,0:11:14.72:42,0,15	0/0:17,0:17:18.33:0,18,164	0/1:16,0:16:80.69:81,0,117	0/0:10,0:10:8.56:0,9,56	0/0:27,0:27:69.68:0,70,1855	1/1:14,0:13:5.72:70,6,0	0/0:15,0:15:39.15:0,39,936	0/0:4,0:4:8.90:0,9,87	0/1:16,0:8:3.38:100,0,3	1/1:27,0:25:0.51:50,1,0	0/1:30,0:30:4.33:128,0,4	0/0:16,0:16:9.08:0,9,93	0/0:17,0:16:9.02:0,9,112	0/0:26,0:26:6.48:0,6,62	0/1:18,0:18:3.79:4,0,25	1/1:24,0:24:9.94:318,10,0	1/1:7,0:7:2.82:53,3,0	1/1:6,0:5:3.01:35,3,0
chr10	92934617	.	CTCTCTCTG	C	3039.63	PASS	AB=0.953;AC=31;AF=0.554;AN=56;BaseQRankSum=2.410;DP=519;FS=11.737;HRun=0;HaplotypeScore=155.9822;InbreedingCoeff=0.1802;MQ=46.45;MQ0=29;MQRankSum=-2.088;QD=8.61;ReadPosRankSum=0.248;VQSLOD=2.1869;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:5.04:0,5,34	0/0:16,0:15:33.04:0,33,873	0/1:30,0:6:3.86:4,0,36	0/0:57,0:11:0.65:0,1,54	1/1:4,15:19:3.01:36,3,0	0/1:20,0:19:45.33:50,0,45	0/1:21,0:20:2.62:3,0,87	0/1:17,0:11:38.59:60,0,39	0/1:5,13:17:5.81:77,0,6	1/1:20,2:21:51.06:696,51,0	1/1:10,0:9:5.61:49,6,0	0/1:17,0:17:14.79:90,0,15	1/1:16,0:16:0.39:223,0,0	0/1:10,0:10:14.39:14,0,30	0/0:27,0:27:68.96:0,69,1559	1/1:4,9:12:9.03:193,9,0	0/1:15,0:15:6.87:7,0,763	0/0:4,0:4:6.41:0,6,57	1/1:13,2:7:10.10:250,10,0	1/1:6,22:26:5.86:35,6,0	1/1:26,3:29:37.17:445,37,0	0/0:13,0:13:0.69:0,1,21	0/0:15,0:14:5.45:0,5,49	0/0:26,0:26:1.62:0,2,24	0/1:17,0:17:3.59:4,0,23	1/1:5,18:23:40.28:725,40,0	1/1:6,1:7:12:162,12,0	1/1:1,5:5:3.01:83,3,0
chr10	92934623	.	CTG	C	1616.97	PASS	AB=0.929;AC=33;AF=0.589;AN=56;BaseQRankSum=2.347;DP=502;FS=26.999;HRun=0;HaplotypeScore=134.7567;InbreedingCoeff=0.3559;MQ=49.69;MQ0=24;MQRankSum=-2.593;QD=4.10;ReadPosRankSum=-1.357;VQSLOD=1.0103;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:3.67:0,4,41	0/0:13,0:12:36.02:0,36,488	0/1:29,0:6:5.26:5,0,13	0/1:53,0:12:1.32:1,0,27	1/1:17,0:17:2.68:11,3,0	0/1:20,0:19:6.07:6,0,90	0/1:19,2:20:15.57:98,0,16	1/1:19,0:13:27.78:216,28,0	1/1:15,0:14:2.95:19,3,0	1/1:20,0:19:46.56:340,47,0	1/1:6,0:5:5.99:50,6,0	0/0:20,0:20:11.96:0,12,134	0/1:17,0:17:2.39:2,0,94	0/0:10,0:10:8.49:0,8,55	0/0:31,0:31:9.87:0,10,834	1/1:11,0:10:8.91:66,9,0	0/1:16,0:16:0.62:1,0,426	0/1:2,2:4:8.01:56,0,8	1/1:13,0:6:17.83:134,18,0	1/1:26,1:26:5.95:49,6,0	1/1:28,0:28:34.89:260,35,0	0/0:12,0:12:8.51:0,9,66	0/0:14,0:13:8.94:0,9,68	0/1:20,5:25:11.27:39,0,11	0/1:15,0:15:0.71:1,0,45	1/1:19,0:19:44.57:271,45,0	1/1:11,0:11:20.77:147,21,0	1/1:6,0:5:2.97:20,3,0
chr10	92934650	.	C	CCTCT	3488.99	PASS	AB=0.988;AC=23;AF=0.411;AN=56;BaseQRankSum=4.230;DP=562;FS=10.309;HRun=0;HaplotypeScore=165.7187;InbreedingCoeff=0.8348;MQ=56.00;MQ0=15;MQRankSum=-4.826;QD=14.07;ReadPosRankSum=-1.089;VQSLOD=2.4922;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,8:12:17.97:271,18,0	0/0:13,0:13:14.71:0,15,533	0/0:41,0:14:7.29:0,7,261	0/1:81,0:22:21.16:21,0,135	0/0:16,0:16:11.85:0,12,139	1/1:8,11:19:31.41:601,31,0	1/1:14,5:18:20.11:301,20,0	0/0:24,0:19:48.14:0,48,772	0/0:12,0:12:9.03:0,9,141	0/0:23,0:22:43.26:0,43,942	0/0:10,0:10:11.68:0,12,209	1/1:11,11:22:29.70:551,30,0	1/1:5,9:14:30:535,30,0	1/1:1,12:15:11.52:248,12,0	0/0:27,0:27:72.19:0,72,1236	0/0:14,0:14:14.92:0,15,166	0/0:18,0:18:49.98:0,50,814	1/1:3,1:4:5.79:117,6,0	0/0:15,0:8:21.07:0,21,362	0/0:23,0:23:23.47:0,23,280	0/0:30,0:30:50.67:0,51,784	1/1:6,2:8:8.84:172,9,0	1/1:6,7:12:9.03:192,9,0	1/1:13,4:17:6.02:113,6,0	1/1:10,10:20:20.39:367,20,0	0/0:20,0:20:47.95:0,48,805	0/0:17,0:17:45.15:0,45,776	0/0:10,0:10:15.01:0,15,232
chr10	92934673	.	CTG	C	33.17	PASS	AB=0.892;AC=6;AF=0.107;AN=56;BaseQRankSum=5.958;DP=575;FS=0.948;HRun=0;HaplotypeScore=177.8087;InbreedingCoeff=0.1372;MQ=49.70;MQ0=10;MQRankSum=-2.922;QD=0.27;ReadPosRankSum=-4.434;VQSLOD=1.6210;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:24.53:0,25,467	0/0:18,0:18:47.79:0,48,805	0/0:21,0:9:6.98:0,7,199	0/1:52,0:12:7.85:13,0,8	0/0:17,0:17:33.02:0,33,594	0/0:16,3:19:22.13:0,22,350	0/1:19,6:23:40.29:40,0,221	0/0:22,0:18:42.13:0,42,769	0/0:18,0:18:32.01:0,32,389	0/0:26,0:23:53.07:0,53,1123	0/0:17,0:15:30.03:0,30,538	0/0:19,0:19:17.63:0,18,266	0/0:10,1:11:14.77:0,15,184	0/0:14,0:14:8.28:0,8,83	0/0:30,0:30:70.21:0,70,1513	0/0:15,0:15:14.91:0,15,263	0/0:24,0:23:60.04:0,60,1019	0/1:5,1:6:15.66:16,0,20	0/0:14,0:9:17.09:0,17,406	0/0:24,0:23:17.93:0,18,559	0/0:37,0:39:74.26:0,74,1338	0/0:9,3:11:2.40:0,2,43	0/0:19,1:17:6.02:0,6,99	1/1:8,4:12:3.01:39,3,0	0/1:22,2:24:28.32:43,0,28	0/0:22,0:21:43.17:0,43,881	0/0:17,0:17:51.12:0,51,939	0/0:11,0:9:21.05:0,21,370
chr10	92934695	.	CTG	C	249.84	PASS	AB=0.987;AC=10;AF=0.179;AN=56;BaseQRankSum=7.481;DP=585;FS=16.079;HRun=0;HaplotypeScore=179.9449;InbreedingCoeff=0.2824;MQ=43.70;MQ0=16;MQRankSum=-7.301;QD=2.17;ReadPosRankSum=0.765;VQSLOD=1.9137;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,2:24:17.49:0,17,430	0/0:16,0:16:48:0,48,787	0/0:18,0:4:9.53:0,10,80	0/0:56,1:5:2.68:0,3,8	0/0:20,0:19:33.01:0,33,538	0/1:16,0:16:51.10:58,0,51	1/1:20,0:19:20.58:130,21,0	0/0:19,1:17:39.04:0,39,513	0/0:15,0:15:33.03:0,33,548	0/0:21,0:19:32.52:0,33,722	0/0:21,0:17:30:0,30,464	0/1:13,0:13:28.10:98,0,28	0/1:9,0:9:22.32:22,0,56	0/0:12,0:12:3.10:0,3,24	0/0:39,0:39:99:0,117,1840	0/0:14,0:14:14.89:0,15,240	0/0:29,0:27:63.21:0,63,1302	0/1:6,0:6:10.03:27,0,10	0/0:22,0:9:24.07:0,24,369	0/0:29,0:25:40.23:0,40,621	0/0:36,0:36:74.86:0,75,1160	0/1:14,0:13:14.90:15,0,16	0/0:22,0:20:5.98:0,6,49	0/1:11,1:12:0:0,0,0	1/1:25,0:25:6.62:42,7,0	0/0:22,0:20:60.04:0,60,916	0/0:19,0:19:53.76:0,54,800	0/0:11,0:9:21.07:0,21,371
chr10	92934697	.	GTC	G	599.69	PASS	AB=0.682;AC=12;AF=0.214;AN=56;BaseQRankSum=5.941;DP=602;FS=15.339;HRun=0;HaplotypeScore=181.5301;InbreedingCoeff=0.7633;MQ=43.06;MQ0=19;MQRankSum=-6.427;QD=5.21;ReadPosRankSum=0.756;VQSLOD=1.8893;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:13.28:0,13,331	0/0:16,0:16:44.97:0,45,664	0/0:24,0:5:6.65:0,7,55	0/0:60,2:6:5.76:0,6,22	0/0:20,0:19:30.03:0,30,328	1/1:8,8:16:12.01:149,12,0	1/1:5,14:18:21.04:261,21,0	0/0:23,0:19:30.06:0,30,316	0/0:14,0:14:30.09:0,30,373	0/0:23,0:21:45.53:0,46,481	0/0:21,0:17:24.03:0,24,265	1/1:4,9:13:15.05:183,15,0	1/1:5,3:9:8.86:84,9,0	0/0:2,8:10:0.18:0,0,0	0/0:40,0:40:96.31:0,96,1539	0/0:14,0:14:11.89:0,12,145	0/0:31,0:29:74.20:0,74,1131	0/0:6,0:6:0.76:0,1,2	0/0:22,0:9:21.95:0,22,260	0/0:31,0:27:36.42:0,36,388	0/0:35,0:35:60.12:0,60,658	0/0:3,11:13:0.09:0,0,0	0/1:6,16:20:0.01:0,0,0	0/1:8,2:11:0:0,0,0	1/1:5,20:25:6.59:77,7,0	0/0:23,0:21:48.08:0,48,543	0/0:20,0:20:45.06:0,45,471	0/0:10,2:9:21.06:0,21,246
chr10	92934739	.	CTG	C	1017.58	PASS	AB=0.942;AC=30;AF=0.556;AN=54;BaseQRankSum=6.145;DP=543;FS=4.532;HRun=0;HaplotypeScore=165.8545;InbreedingCoeff=-0.0441;MQ=37.84;MQ0=35;MQRankSum=-1.680;QD=2.87;ReadPosRankSum=-8.258;VQSLOD=-0.0349;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:6.76:39,7,0	0/0:13,0:13:36.09:0,36,582	0/0:28,0:1:1.25:0,1,3	0/0:72,0:11:7.50:0,8,107	./.	0/1:18,1:19:1.73:2,0,61	0/1:21,3:22:0.96:90,0,1	1/1:8,3:5:10.45:98,10,0	1/1:13,0:13:0.73:84,1,0	0/1:20,0:13:27.04:27,0,94	1/1:19,0:11:5.59:35,6,0	0/1:10,0:10:14.74:68,0,15	0/1:7,3:10:32.54:33,0,33	1/1:3,2:5:7.71:43,8,0	0/0:34,0:34:96.29:0,96,1698	1/1:9,0:9:6.46:51,6,0	0/0:31,0:29:80.56:0,81,1137	0/1:15,0:14:4.49:4,0,50	0/1:6,4:6:6.12:54,0,6	0/1:26,0:16:7.82:39,0,8	0/1:18,0:18:13.48:142,0,13	0/1:28,3:31:15.02:78,0,15	0/1:23,1:24:17.61:55,0,18	1/1:13,1:14:2.05:26,2,0	1/1:22,0:22:4.98:113,5,0	0/1:12,0:11:56.12:56,0,86	0/1:13,0:11:7.63:34,0,8	0/1:11,0:4:0:0,0,0
chr10	92934745	.	C	CTG	88.87	PASS	AB=0.980;AC=16;AF=0.296;AN=54;BaseQRankSum=6.879;DP=523;FS=33.375;HRun=0;HaplotypeScore=165.6021;InbreedingCoeff=0.1488;MQ=37.80;MQ0=39;MQRankSum=-4.064;QD=0.41;ReadPosRankSum=-3.316;VQSLOD=-0.2693;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,4:21:7.17:43,0,7	0/0:13,0:13:39.08:0,39,522	0/0:28,0:1:2.22:0,2,7	0/0:64,0:10:10.98:0,11,96	./.	0/1:20,0:20:14.84:15,0,29	0/1:21,0:20:27.09:27,0,65	0/0:9,0:3:6.46:0,6,51	0/0:10,0:10:12.04:0,12,162	0/0:19,0:12:31.82:0,32,346	1/1:17,0:10:1.78:5,2,0	0/1:13,0:13:20.69:23,0,21	1/1:10,0:10:5.42:30,5,0	1/1:7,0:7:6.98:27,7,0	0/0:36,0:36:99:0,105,1515	0/0:7,0:7:5.93:0,6,43	0/0:26,0:24:66.20:0,66,953	0/1:15,0:14:4.54:5,0,53	0/0:11,0:6:12.01:0,12,138	0/0:24,0:14:18.47:0,18,206	0/0:16,0:16:29.99:0,30,298	0/1:32,0:32:9.74:10,0,133	0/1:24,0:24:1.17:1,0,8	1/1:14,0:14:0.35:10,0,0	0/1:22,0:22:6.15:37,0,6	0/0:11,0:9:24.05:0,24,270	0/0:12,0:10:3.01:0,3,40	0/0:9,0:2:2.99:0,3,24
chr10	92934749	.	C	CTG	2955.66	PASS	AB=0.902;AC=29;AF=0.604;AN=48;BaseQRankSum=6.908;DP=503;FS=8.908;HRun=0;HaplotypeScore=152.3811;InbreedingCoeff=0.2964;MQ=37.76;MQ0=38;MQRankSum=-3.240;QD=9.85;ReadPosRankSum=-5.259;VQSLOD=1.6924;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:2.96:61,0,3	0/0:12,0:12:27.02:0,27,287	./.	0/0:58,0:10:2.29:0,2,40	./.	1/1:16,6:22:26.66:341,27,0	0/1:16,4:20:24.20:318,0,24	0/1:8,0:2:13.91:44,0,14	0/0:9,0:9:3:0,3,26	1/1:17,0:11:3.44:21,3,0	1/1:13,2:8:1.82:5,2,0	1/1:10,4:14:17.82:224,18,0	1/1:9,2:11:26.38:345,26,0	1/1:6,2:8:12.04:194,12,0	0/0:36,0:36:96.22:0,96,1136	./.	0/0:24,0:23:50.98:0,51,610	0/1:3,12:15:29.13:90,0,29	1/1:9,0:4:2.90:16,3,0	0/1:21,2:13:0:0,0,0	0/1:11,0:11:12.70:32,0,13	1/1:20,13:33:15.83:577,16,0	1/1:16,8:24:23.98:279,24,0	1/1:9,6:15:11.80:177,12,0	1/1:15,9:24:27.03:370,27,0	0/1:9,0:7:17.97:18,0,30	0/0:10,0:8:3.01:0,3,37	./.
chr10	92934783	.	CTG	C	82.49	PASS	AB=0.750;AC=13;AF=0.260;AN=50;BaseQRankSum=4.918;DP=456;FS=6.809;HRun=0;HaplotypeScore=141.3672;InbreedingCoeff=0.5686;MQ=44.03;MQ0=19;MQRankSum=-4.281;QD=2.50;ReadPosRankSum=-3.839;VQSLOD=0.9694;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:4.73:0,5,406	0/0:12,0:12:17.84:0,18,469	0/0:27,0:8:12.63:0,13,159	0/0:47,0:10:17.88:0,18,244	1/1:5,0:2:2.88:15,3,0	0/0:24,0:24:26.70:0,27,672	0/0:24,0:23:26.45:0,26,445	0/0:4,0:2:2.36:0,2,23	0/0:1,0:1:3:0,3,27	1/1:8,0:3:4.12:34,4,0	1/1:5,3:3:3.01:38,3,0	0/0:22,0:22:38.69:0,39,642	0/0:17,0:16:38.39:0,38,615	0/0:16,0:16:26.51:0,27,405	0/0:37,0:37:87:0,87,1496	1/1:0,1:1:2.94:18,3,0	0/0:26,0:25:50.06:0,50,956	0/0:13,0:13:15.05:0,15,288	./.	./.	1/1:1,2:2:4.25:35,4,0	0/0:39,0:39:71.37:0,71,1228	0/0:21,0:21:37.35:0,37,576	0/0:27,0:27:18.38:0,18,322	0/0:24,0:23:23.78:0,24,647	1/1:1,1:1:3.01:40,3,0	0/1:4,2:4:21.57:43,0,22	./.
chr10	92934803	.	CTG	C	358.77	PASS	AB=0.867;AC=9;AF=0.196;AN=46;BaseQRankSum=5.444;DP=455;FS=9.038;HRun=0;HaplotypeScore=146.7277;InbreedingCoeff=0.3533;MQ=50.43;MQ0=11;MQRankSum=-3.582;QD=4.66;ReadPosRankSum=-0.123;VQSLOD=2.1595;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,15:24:51.16:406,0,51	0/0:20,0:20:53.49:0,53,737	0/0:29,0:10:8.50:0,8,142	0/0:43,0:17:8.73:0,9,90	0/0:4,0:2:2.88:0,3,15	0/0:25,0:24:39.12:0,39,592	0/0:23,0:22:29.35:0,29,442	./.	./.	0/0:5,0:2:2.90:0,3,16	1/1:7,0:3:2.74:12,3,0	0/0:23,1:24:41.64:0,42,674	0/0:17,0:17:41.71:0,42,651	0/0:18,0:18:29.90:0,30,485	0/0:34,0:34:78.21:0,78,1202	1/1:1,0:1:3:25,3,0	0/0:26,0:25:43.99:0,44,940	0/0:13,0:13:15.02:0,15,209	./.	./.	0/0:3,0:2:0:0,0,0	0/1:38,1:39:11.28:11,0,790	0/0:27,0:27:39.60:0,40,537	0/0:28,0:29:20.41:0,20,320	0/0:26,0:26:44.47:0,44,650	1/1:1,0:1:2.84:14,3,0	0/1:4,0:3:7.55:8,0,8	./.
chr10	92934853	.	GTCTCTCTC	G	2292.89	PASS	AB=0.850;AC=22;AF=0.550;AN=40;BaseQRankSum=6.160;DP=396;FS=4.912;HRun=0;HaplotypeScore=164.9822;InbreedingCoeff=0.5438;MQ=52.31;MQ0=18;MQRankSum=-5.004;QD=11.64;ReadPosRankSum=-0.534;VQSLOD=2.6029;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:1.86:0,2,21	0/0:21,0:21:48.03:0,48,1359	./.	0/0:48,0:9:0.47:0,0,1	./.	1/1:10,7:16:11.47:187,11,0	1/1:13,2:14:11.79:227,12,0	0/0:12,0:10:9.03:0,9,128	0/0:1,0:1:3.01:0,3,32	./.	0/0:4,0:1:3:0,3,25	1/1:13,11:25:5.73:695,6,0	1/1:11,5:16:7.28:174,7,0	1/1:9,4:14:17.78:319,18,0	0/0:36,0:40:84.24:0,84,2352	./.	0/0:25,0:25:39.05:0,39,992	0/1:4,3:7:3:217,0,3	0/1:13,0:6:8.53:9,0,113	./.	1/1:5,0:4:1.25:3,1,0	1/1:9,20:31:5.33:106,5,0	1/1:10,4:13:11.96:215,12,0	1/1:20,4:24:5.96:121,6,0	1/1:7,8:16:8.53:164,9,0	./.	./.	./.
chr10	92934889	.	G	GCC	631.99	PASS	AB=0.952;AC=13;AF=0.260;AN=50;BaseQRankSum=3.900;DP=454;FS=19.377;HRun=0;HaplotypeScore=158.8391;InbreedingCoeff=0.5481;MQ=46.79;MQ0=40;MQRankSum=-6.605;QD=5.02;ReadPosRankSum=-0.887;VQSLOD=1.7181;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:11.73:0,12,139	0/0:14,0:14:42.07:0,42,554	0/0:49,0:6:12.51:0,13,168	0/1:84,0:11:4.37:4,0,32	1/1:2,0:2:2.84:14,3,0	0/0:19,0:18:23.42:0,23,316	0/0:18,1:19:29.72:0,30,497	1/1:9,11:12:27.02:500,27,0	0/0:6,0:5:0.89:0,1,2	1/1:4,0:4:11.88:80,12,0	1/1:1,1:1:3.01:34,3,0	0/0:24,0:24:29.41:0,29,360	0/0:15,0:15:18.80:0,19,254	0/0:13,0:13:21.68:0,22,275	0/0:36,0:35:99:0,102,1531	1/1:2,1:2:5.85:57,6,0	0/0:19,0:19:33.68:0,34,711	0/0:12,0:13:26.20:0,26,422	0/1:5,1:4:4.87:66,0,5	./.	0/0:6,0:6:1.53:0,2,4	0/0:31,0:31:4.95:0,5,133	0/0:15,0:15:14.42:0,14,206	0/0:19,0:19:11.24:0,11,156	0/0:17,0:17:10.33:0,10,119	0/1:5,0:4:11.33:28,0,11	./.	./.
chr10	92934896	.	TCC	T	174.33	PASS	AB=0.873;AC=9;AF=0.180;AN=50;BaseQRankSum=0.409;DP=508;FS=2.404;HRun=3;HaplotypeScore=174.4117;InbreedingCoeff=0.3224;MQ=49.92;MQ0=47;MQRankSum=-4.261;QD=1.25;ReadPosRankSum=0.218;VQSLOD=-0.2847;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:38.38:0,38,336	0/0:14,0:14:35.60:0,36,500	0/0:58,1:10:16.63:0,17,177	0/1:101,1:18:19.77:20,0,66	1/1:1,2:3:3.01:41,3,0	0/0:20,0:19:41.49:0,41,500	0/0:23,0:23:47.45:0,47,712	0/1:18,0:10:0.84:105,0,1	0/0:7,0:6:5.69:0,6,57	0/0:4,0:4:10.69:0,11,63	1/1:2,0:2:3:29,3,0	0/0:26,0:26:48.93:0,49,512	0/0:17,0:17:33.74:0,34,379	0/0:14,0:14:29.57:0,30,394	0/0:37,0:36:99:0,103,1716	0/1:3,0:2:15.78:16,0,18	0/0:17,0:17:6.09:0,6,670	0/0:14,0:14:32.98:0,33,530	0/1:6,1:5:22.69:88,0,23	./.	0/1:0,5:5:0.04:0,0,0	0/0:30,0:30:21.43:0,21,280	0/0:15,0:15:14.17:0,14,232	0/0:26,0:26:28.27:0,28,333	0/0:20,0:20:29.74:0,30,302	0/0:4,0:3:8.94:0,9,78	./.	./.
chr10	92934902	.	C	CCTCT	1385.57	PASS	AB=0.988;AC=29;AF=0.580;AN=50;BaseQRankSum=8.339;DP=536;FS=18.454;HRun=0;HaplotypeScore=182.2692;InbreedingCoeff=0.0687;MQ=49.34;MQ0=44;MQRankSum=0.298;QD=3.41;ReadPosRankSum=-5.233;VQSLOD=-0.6168;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:33.29:101,33,0	0/0:11,0:11:27.06:0,27,383	0/0:59,0:11:11.24:0,11,114	0/1:110,0:19:21:21,0,67	1/1:4,0:4:2.22:7,2,0	0/1:22,0:21:19.78:81,0,20	0/1:26,0:26:30.37:30,0,258	1/1:16,0:8:2.68:11,3,0	1/1:9,0:5:7.27:79,7,0	1/1:1,3:4:12.03:227,12,0	0/1:4,0:4:0.23:0,0,0	0/1:27,0:26:80.89:97,0,81	0/1:17,0:17:58.56:82,0,59	0/1:13,0:13:25.93:57,0,26	0/0:36,0:35:80.74:0,81,1154	1/1:3,1:2:3.01:70,3,0	0/0:17,0:17:44.30:0,44,631	0/1:15,0:15:54.12:94,0,54	0/1:7,1:6:3.50:71,0,3	./.	0/0:5,0:5:1.19:0,1,3	0/1:31,0:31:8.28:50,0,8	0/1:16,0:16:5.55:6,0,61	1/1:29,0:29:32.79:174,33,0	1/1:21,0:21:18.48:98,18,0	1/1:1,2:3:9.03:186,9,0	./.	./.
chr10	92934915	.	CTGTCTG	C	68.99	PASS	AB=0.927;AC=11;AF=0.220;AN=50;BaseQRankSum=3.807;DP=551;FS=0.961;HRun=0;HaplotypeScore=197.4605;InbreedingCoeff=0.2254;MQ=54.12;MQ0=32;MQRankSum=-1.351;QD=0.39;ReadPosRankSum=-4.844;VQSLOD=1.5886;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:0.66:0,1,828	0/1:12,0:12:11.76:12,0,958	0/0:57,0:11:23.56:0,24,432	0/1:111,0:31:29.70:30,0,321	1/1:4,1:5:2.22:7,2,0	0/0:24,0:23:32.05:0,32,733	0/0:29,0:29:53.67:0,54,1519	1/1:4,0:2:3.01:32,3,0	0/0:10,0:5:2.80:0,3,56	0/0:4,0:4:6.17:0,6,86	0/1:4,0:4:0.04:0,0,0	0/0:27,0:26:32.58:0,33,823	0/0:19,0:19:32.93:0,33,846	0/0:14,0:14:18.95:0,19,550	0/0:38,0:37:99:0,102,2815	0/0:4,0:1:3.01:0,3,41	0/0:19,0:19:41.53:0,42,1397	0/1:19,0:19:0.52:1,0,593	0/1:6,1:6:28.08:97,0,28	./.	1/1:2,4:5:0.82:3,1,0	0/0:33,0:33:20.71:0,21,570	0/0:16,0:16:14.82:0,15,311	0/0:29,0:29:35.50:0,35,1016	0/0:16,0:16:21.30:0,21,510	0/0:3,0:3:8.81:0,9,116	./.	./.
chr10	92934919	.	CTG	C	316.35	PASS	AB=0.995;AC=7;AF=0.146;AN=48;BaseQRankSum=2.851;DP=563;FS=0.797;HRun=0;HaplotypeScore=176.1793;InbreedingCoeff=0.2626;MQ=55.18;MQ0=30;MQRankSum=-0.436;QD=1.83;ReadPosRankSum=-4.971;VQSLOD=1.0870;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,11:29:21.85:380,22,0	0/0:13,0:13:19.11:0,19,571	0/0:60,0:15:24.37:0,24,366	0/1:112,2:33:9.94:10,0,259	./.	0/0:26,0:25:33.52:0,34,319	0/0:33,0:32:33.88:0,34,609	0/1:6,0:3:8.49:8,0,13	0/0:10,0:5:6.02:0,6,84	0/0:4,0:4:11.05:0,11,94	0/1:5,0:4:0:0,0,0	0/0:26,0:25:32.66:0,33,363	0/0:20,0:20:18.23:0,18,328	0/0:16,0:16:18.93:0,19,244	0/0:35,0:34:98.74:0,99,1630	0/0:4,0:1:3.01:0,3,34	0/0:19,0:19:39.39:0,39,795	0/0:19,0:19:0.81:0,1,223	0/1:9,0:8:28.97:29,0,40	./.	0/1:7,0:6:0.04:0,0,0	0/0:32,0:32:20.89:0,21,236	0/0:16,0:16:10.15:0,10,110	0/0:28,0:28:35.40:0,35,397	0/0:19,0:19:1.62:0,2,182	0/0:3,0:3:9.02:0,9,117	./.	./.
chr10	92934935	.	C	CTCTG	7480.19	PASS	AB=1.000;AC=29;AF=0.580;AN=50;BaseQRankSum=-0.341;DP=571;FS=16.840;HRun=0;HaplotypeScore=142.8546;InbreedingCoeff=0.5845;MQ=63.74;MQ0=17;MQRankSum=0.836;QD=18.70;ReadPosRankSum=4.168;VQSLOD=3.7330;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:40:80.75:471,81,0	0/0:14,0:14:36.09:0,36,612	0/0:69,0:31:11.86:0,12,463	0/1:114,0:41:0.65:1,0,436	0/0:6,0:6:0.89:0,1,2	1/1:14,7:21:33.11:827,33,0	1/1:22,7:29:65.96:1294,66,0	0/0:2,0:1:3.01:0,3,39	0/0:9,0:5:2.10:0,2,15	1/1:4,0:4:8.75:42,9,0	0/0:4,0:3:0:0,0,0	1/1:3,20:24:24.08:653,24,0	1/1:3,21:25:10.14:623,10,0	1/1:2,16:19:17.86:431,18,0	0/0:35,0:34:93.25:0,93,1629	1/1:4,0:1:2.88:15,3,0	0/0:22,0:22:63.03:0,63,939	1/1:5,14:20:22.24:462,22,0	0/1:6,0:5:22.18:22,0,35	./.	0/0:7,0:6:1.19:0,1,3	1/1:13,7:20:29.84:616,30,0	1/1:2,18:20:8.82:236,9,0	1/1:18,12:30:45.09:1071,45,0	1/1:9,7:16:29.88:678,30,0	0/1:4,0:4:8.30:39,0,8	./.	./.
chr10	92934948	.	TTC	T	162.87	PASS	AB=1.000;AC=8;AF=0.160;AN=50;BaseQRankSum=4.284;DP=563;FS=2.952;HRun=0;HaplotypeScore=141.7107;InbreedingCoeff=0.4834;MQ=63.42;MQ0=18;MQRankSum=-5.001;QD=5.43;ReadPosRankSum=-2.553;VQSLOD=2.6361;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,1:41:56.33:0,56,1454	0/0:11,0:11:21.94:0,22,595	0/0:70,0:28:29.50:0,30,773	0/0:105,0:36:50.24:0,50,790	0/0:4,2:6:0.89:0,1,2	0/0:18,0:18:32.85:0,33,591	0/0:31,0:30:79.84:0,80,1400	1/1:3,3:5:2.88:93,3,0	0/1:10,0:6:9.83:10,0,25	1/1:2,0:2:5.22:32,5,0	0/0:4,0:3:0:0,0,0	0/0:25,0:24:33.55:0,34,563	0/0:22,0:22:27.09:0,27,502	0/0:22,0:22:31.31:0,31,529	0/0:34,0:33:96.28:0,96,1891	0/0:3,1:1:2.99:0,3,23	0/0:24,0:24:49.41:0,49,1258	0/0:20,0:20:3.09:0,3,483	1/1:4,3:6:9.48:140,9,0	0/0:1,0:1:3:0,3,28	./.	0/0:17,1:18:42.38:0,42,709	0/0:22,0:22:18.53:0,19,282	0/0:32,0:32:48.53:0,49,1125	0/0:18,0:18:20.22:0,20,535	0/1:5,0:4:11.38:11,0,13	./.	./.
chr10	92934961	.	C	CTCTG	421.61	PASS	AB=0.944;AC=12;AF=0.222;AN=54;BaseQRankSum=4.284;DP=595;FS=6.722;HRun=0;HaplotypeScore=162.5074;InbreedingCoeff=0.5173;MQ=58.09;MQ0=25;MQRankSum=-6.216;QD=7.15;ReadPosRankSum=-3.781;VQSLOD=1.5179;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:44:87.09:0,87,1550	0/0:14,0:14:39.09:0,39,626	0/0:48,0:21:1.87:0,2,459	0/0:76,0:24:33.19:0,33,407	0/0:10,0:10:0.67:0,1,1	0/0:25,0:25:30.09:0,30,518	0/0:36,0:35:61.40:0,61,1231	1/1:15,0:12:23.76:285,24,0	1/1:4,9:9:3.84:12,4,0	0/1:4,0:3:6.16:14,0,6	0/0:5,1:5:0.36:0,0,1	0/0:30,0:29:32.62:0,33,540	0/0:25,0:24:24.05:0,24,433	0/0:26,0:26:38.96:0,39,588	0/0:36,0:35:99:0,102,1749	1/1:4,2:2:2.60:10,3,0	0/0:29,0:29:76.19:0,76,1277	0/0:23,0:23:15.86:0,16,658	1/1:10,0:6:1.84:129,2,0	1/1:3,0:2:0.47:1,0,0	./.	0/0:17,0:17:33.11:0,33,618	0/0:23,0:23:17.95:0,18,299	0/0:36,0:36:75.01:0,75,1235	0/0:17,0:17:27.04:0,27,474	0/1:7,1:5:16.80:103,0,17	0/0:7,1:6:7.74:0,8,43	0/0:2,0:2:2.98:0,3,21
chr10	92934983	.	GTCTCTC	G	275.23	PASS	AB=0.944;AC=11;AF=0.204;AN=54;BaseQRankSum=5.843;DP=539;FS=15.352;HRun=0;HaplotypeScore=164.4081;InbreedingCoeff=0.2851;MQ=50.68;MQ0=25;MQRankSum=-5.513;QD=3.53;ReadPosRankSum=-4.613;VQSLOD=0.2676;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:48:99:0,114,2622	0/0:13,0:13:32.99:0,33,765	0/0:12,0:4:5.85:0,6,54	0/0:21,0:5:2.18:0,2,59	0/0:10,0:11:0.20:0,0,9	0/0:23,0:23:30.08:0,30,619	0/0:37,0:35:71.67:0,72,916	0/0:23,0:17:7:0,7,477	1/1:10,0:6:2.94:18,3,0	0/1:7,0:5:1.76:119,0,2	0/1:7,0:6:0:0,0,0	0/0:30,0:30:39.09:0,39,1006	0/0:23,0:22:16.28:0,16,334	0/0:22,0:22:36.04:0,36,1062	0/0:39,0:38:99:0,114,2921	0/1:5,4:6:8.16:64,0,8	0/0:31,0:31:88.75:0,89,2431	0/0:29,0:29:66.06:0,66,1555	0/1:8,0:4:20.56:21,0,80	0/1:12,0:9:0.14:0,0,0	./.	0/0:18,0:18:36.03:0,36,891	0/0:19,0:19:12.03:0,12,372	0/0:40,0:40:93.27:0,93,2376	0/0:15,0:15:30.01:0,30,615	0/1:10,1:7:7.61:113,0,8	0/1:10,0:9:8.63:9,0,25	1/1:1,2:3:3.90:60,4,0
chr10	92934997	.	C	CTG	222.66	PASS	AB=0.948;AC=8;AF=0.154;AN=52;BaseQRankSum=4.161;DP=549;FS=16.673;HRun=0;HaplotypeScore=161.2238;InbreedingCoeff=0.1440;MQ=49.10;MQ0=18;MQRankSum=-6.008;QD=2.65;ReadPosRankSum=0.213;VQSLOD=1.6938;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:99:0,104,1127	0/0:18,0:18:51.10:0,51,636	0/0:2,0:1:3:0,3,26	./.	0/0:12,0:14:5.83:0,6,37	0/0:24,0:24:30.04:0,30,332	0/0:37,0:36:66.03:0,66,726	0/1:24,0:18:78.78:221,0,79	0/0:13,2:12:5.93:0,6,40	0/1:10,1:9:32.09:32,0,97	0/0:8,0:8:1.20:0,1,27	0/0:34,0:34:38.80:0,39,417	0/0:25,0:24:16.24:0,16,155	0/0:24,0:24:40.45:0,40,451	0/0:38,0:37:99:0,108,1488	0/0:9,1:8:5.95:0,6,58	0/0:33,0:33:59.60:0,60,1166	0/0:32,1:33:23.55:0,24,682	0/1:6,1:4:12.18:43,0,12	1/1:14,0:11:1.22:3,1,0	./.	0/0:18,0:18:20.70:0,21,231	0/0:22,0:22:9.94:0,10,85	0/0:34,0:34:53.89:0,54,579	0/0:18,0:17:23.48:0,23,237	0/1:17,0:13:2.25:2,0,150	1/1:10,1:10:2.28:32,2,0	0/0:2,1:3:2.37:0,2,8
chr10	92935002	.	T	TCTCTCTCC	1996.21	PASS	AC=22;AF=0.407;AN=54;BaseQRankSum=4.213;DP=588;FS=32.862;HRun=0;HaplotypeScore=214.8904;InbreedingCoeff=0.8617;MQ=48.98;MQ0=17;MQRankSum=-9.263;QD=13.58;ReadPosRankSum=-4.897;VQSLOD=0.5579;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:99:0,106,2027	0/0:20,0:20:54.08:0,54,903	0/0:3,0:1:3.01:0,3,59	0/0:5,0:1:3:0,3,25	1/1:15,0:15:7.31:33,7,0	0/0:23,0:23:27.09:0,27,472	0/0:41,0:40:51.94:0,52,993	1/1:25,0:20:7.88:220,8,0	1/1:10,1:11:11.95:133,12,0	1/1:14,0:12:30:514,30,0	1/1:13,0:12:5.72:36,6,0	0/0:37,0:37:46.68:0,47,774	0/0:25,0:24:29.29:0,29,367	0/0:23,0:23:47.51:0,48,759	0/0:40,0:40:99:0,111,2512	1/1:11,0:10:15.39:138,15,0	0/0:34,0:34:88.24:0,88,2160	0/0:33,0:33:75.67:0,76,1193	1/1:6,1:3:9.03:203,9,0	1/1:16,0:13:6.71:40,7,0	./.	0/0:20,0:20:35.82:0,36,415	0/0:24,0:24:18.03:0,18,232	0/0:37,0:37:82.26:0,82,1175	0/0:21,0:20:33.05:0,33,432	1/1:18,0:14:38.86:521,39,0	1/1:11,1:11:16.85:260,17,0	1/1:4,1:5:5.97:102,6,0
chr10	92935005	.	CTG	C	2293.23	PASS	AB=0.973;AC=29;AF=0.518;AN=56;BaseQRankSum=-0.654;DP=610;FS=13.280;HRun=0;HaplotypeScore=158.3405;InbreedingCoeff=-0.0403;MQ=48.36;MQ0=17;MQRankSum=-4.163;QD=5.26;ReadPosRankSum=-6.463;VQSLOD=-0.1691;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:44.31:0,44,1138	0/0:21,0:21:48.38:0,48,829	0/0:5,0:3:6.02:0,6,87	0/1:8,0:3:0.82:1,0,43	1/1:17,0:17:8.51:81,9,0	1/1:1,21:22:27.08:328,27,0	1/1:25,17:41:71.96:808,72,0	1/1:26,0:21:46.17:323,46,0	0/1:12,0:11:6.94:26,0,7	0/1:17,0:14:57.05:57,0,59	1/1:12,0:11:4.86:50,5,0	0/1:35,2:37:27.94:28,0,207	0/1:24,0:23:42.10:42,0,87	0/1:22,2:24:89.30:89,0,201	0/0:41,0:41:99:0,117,1821	0/1:11,0:10:0.62:43,0,1	0/0:34,0:34:75.13:0,75,1333	0/1:29,3:32:99:118,0,323	0/1:8,0:3:1.80:16,0,2	1/1:16,0:13:1.86:17,2,0	1/1:9,0:8:5.96:43,6,0	0/1:19,1:20:32.67:33,0,98	0/0:23,1:24:11.50:0,12,78	0/1:33,4:37:99:122,0,254	0/1:21,1:21:20.13:20,0,147	0/1:21,0:17:52.66:122,0,53	0/1:13,0:12:34.59:59,0,35	0/1:6,0:5:6.66:39,0,7
chr10	92935007	.	G	GTC	1775.51	PASS	AB=0.978;AC=27;AF=0.482;AN=56;BaseQRankSum=-1.692;DP=622;FS=7.194;HRun=0;HaplotypeScore=164.5237;InbreedingCoeff=-0.0869;MQ=49.22;MQ0=17;MQRankSum=-1.590;QD=4.13;ReadPosRankSum=-2.544;VQSLOD=1.9903;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,17:49:48.08:993,0,48	0/0:20,0:22:50.94:0,51,556	0/0:8,0:5:8.39:0,8,80	0/0:10,0:4:5.88:0,6,51	1/1:16,0:16:0.37:1,0,0	0/0:22,0:22:26.31:0,26,153	0/0:41,0:40:50.42:0,50,291	0/1:27,0:22:18.64:21,0,19	1/1:12,0:11:2.46:17,2,0	0/1:19,0:16:2.62:114,0,3	0/0:12,0:11:3.24:0,3,18	0/1:34,1:35:47.43:47,0,108	0/1:23,0:22:58.07:61,0,58	0/1:23,0:23:20.82:21,0,134	0/0:41,0:41:89.89:0,90,1020	0/1:11,0:10:16.65:25,0,17	0/0:36,0:36:74.37:0,74,769	0/1:31,0:31:70.74:71,0,196	1/1:8,0:3:5.98:53,6,0	1/1:18,0:15:0.45:1,0,0	1/1:9,0:8:0.37:1,0,0	0/1:21,0:21:19.97:91,0,20	0/1:25,0:25:20.14:34,0,20	0/1:39,0:39:99:133,0,142	0/1:22,0:21:50.34:50,0,54	0/1:22,0:18:3.97:129,0,4	1/1:13,0:12:4.62:37,5,0	1/1:6,0:5:5.65:31,6,0
chr10	92936513	.	T	TGA	669.10	PASS	AB=0.903;AC=31;AF=0.646;AN=48;BaseQRankSum=0.133;DP=578;FS=13.777;HRun=0;HaplotypeScore=98.8090;InbreedingCoeff=-0.0236;MQ=70.90;MQ0=5;MQRankSum=-3.499;QD=1.58;ReadPosRankSum=0.241;VQSLOD=0.7837;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:15.55:0,16,118	0/0:7,0:7:2.29:0,2,6	./.	./.	0/0:16,0:16:5.42:0,5,22	1/1:25,0:25:2.04:6,2,0	1/1:23,0:22:2.50:9,2,0	1/1:23,0:23:0.89:2,1,0	0/1:13,5:19:32.20:32,0,59	0/1:18,1:20:15.92:63,0,16	1/1:8,0:8:2.88:15,3,0	1/1:23,0:23:4.28:30,4,0	1/1:17,0:17:9.40:36,9,0	1/1:24,0:24:13.47:78,13,0	0/1:34,0:34:33.12:39,0,33	0/1:18,3:22:18.97:38,0,19	0/1:17,3:19:46.55:118,0,47	1/1:14,0:14:2.04:6,2,0	0/0:20,0:20:5.75:0,6,43	1/1:11,0:11:5.96:43,6,0	0/1:36,0:35:12.16:103,0,12	1/1:18,0:18:2.84:14,3,0	./.	0/1:22,0:22:0:0,0,0	1/1:10,0:10:3.01:30,3,0	0/1:31,0:31:43.74:55,0,44	0/1:15,6:23:77.48:91,0,77	./.
chr10	92936557	.	A	AGT	380.12	PASS	AB=0.994;AC=16;AF=0.286;AN=56;BaseQRankSum=10.049;DP=691;FS=28.451;HRun=0;HaplotypeScore=96.0103;InbreedingCoeff=0.4215;MQ=56.71;MQ0=20;MQRankSum=-2.213;QD=1.55;ReadPosRankSum=3.053;VQSLOD=-0.1568;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:98.76:0,99,896	0/0:7,0:7:16.54:0,17,130	0/0:35,0:13:26.22:0,26,320	0/0:42,0:8:18.43:0,18,181	0/0:18,0:18:44.89:0,45,364	0/1:27,0:26:13.78:14,0,39	1/1:24,0:23:2.62:19,3,0	0/0:25,0:25:63.04:0,63,559	0/0:17,0:17:10.82:0,11,241	0/0:29,0:28:58.18:0,58,640	0/0:13,0:13:26.55:0,27,206	1/1:33,0:33:12.74:57,13,0	0/1:18,0:18:52:55,0,52	0/1:25,1:26:46.68:82,0,47	0/0:36,0:36:57.33:0,57,508	0/0:21,0:21:23.71:0,24,300	0/1:17,0:17:10.97:11,0,295	1/1:14,0:14:5.86:37,6,0	0/0:20,0:19:54.02:0,54,516	0/0:17,0:17:37.96:0,38,302	0/0:43,0:43:44.09:0,44,594	0/1:27,0:26:27.67:127,0,28	1/1:15,0:15:12.11:94,12,0	0/1:27,0:27:0:0,0,0	1/1:3,14:17:3.01:48,3,0	0/0:32,0:32:79.92:0,80,702	0/0:36,0:35:26.15:0,26,549	0/0:9,0:9:17.93:0,18,140
chr10	92936559	.	A	AGTGT	1514.15	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=8.223;DP=676;FS=1.507;HRun=0;HaplotypeScore=119.8464;InbreedingCoeff=0.8621;MQ=57.63;MQ0=20;MQRankSum=-3.754;QD=6.70;ReadPosRankSum=-0.331;VQSLOD=2.6522;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:95.54:0,96,1540	0/0:7,0:7:15.05:0,15,242	0/0:35,0:13:36.05:0,36,603	0/0:43,0:9:17.62:0,18,281	0/0:16,0:16:45.15:0,45,723	1/1:26,0:25:3.01:71,3,0	1/1:5,19:24:3.01:82,3,0	0/0:23,0:23:64.57:0,65,1098	0/0:17,0:17:30.08:0,30,471	0/0:29,0:28:73.45:0,73,1161	0/0:13,0:13:23.75:0,24,356	1/1:34,0:34:12.54:193,13,0	1/1:19,0:19:15.04:270,15,0	1/1:24,2:26:14.59:350,15,0	0/0:33,0:33:57.12:0,57,866	0/0:20,0:20:44.98:0,45,637	0/0:18,0:18:39.08:0,39,587	1/1:0,12:12:3.01:83,3,0	0/0:21,0:20:57.18:0,57,987	0/0:18,0:18:34.21:0,34,556	0/0:42,0:42:78.21:0,78,1186	1/1:26,0:25:25.79:366,26,0	1/1:12,0:12:13.45:190,13,0	0/1:27,0:27:0:0,0,0	1/1:19,0:19:8.98:99,9,0	0/0:29,0:29:78.20:0,78,1239	0/0:36,0:35:70.88:0,71,1062	0/0:9,0:9:21.01:0,21,275
chr10	92936561	.	A	AGTGTGT	2553	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=4.344;DP=652;FS=3.862;HRun=0;HaplotypeScore=126.8364;InbreedingCoeff=0.8834;MQ=59.60;MQ0=20;MQRankSum=-3.002;QD=13.51;ReadPosRankSum=-2.085;VQSLOD=2.5937;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:39:94.21:0,94,2207	0/0:7,0:7:20.54:0,21,388	0/0:36,0:14:35.08:0,35,747	0/0:44,0:10:20.07:0,20,381	0/0:16,0:16:45.15:0,45,1051	1/1:0,18:23:3.01:108,3,0	1/1:20,0:20:3.01:69,3,0	0/0:26,0:26:69.20:0,69,1568	0/0:15,0:15:30.10:0,30,673	0/0:26,0:25:72.24:0,72,1607	0/0:12,0:12:13.34:0,13,519	1/1:0,23:29:11.71:370,12,0	1/1:2,15:19:18.06:518,18,0	1/1:7,18:25:20.99:416,21,0	0/0:23,0:31:65.63:0,66,1299	0/0:20,0:20:47.96:0,48,972	0/0:15,0:16:42.12:0,42,868	1/1:14,0:14:6.02:138,6,0	0/0:22,0:21:63.18:0,63,1437	0/0:17,0:17:19.25:0,19,810	0/0:37,0:37:84.66:0,85,1784	1/1:26,0:25:29.32:589,29,0	1/1:12,0:12:13.55:302,14,0	0/0:1,20:29:0:0,0,0	1/1:19,0:19:18.01:237,18,0	0/0:27,0:27:47.72:0,48,1589	0/0:32,0:31:67.02:0,67,1486	0/0:11,0:11:24.05:0,24,434
chr10	92940398	.	T	TGAGA	2026.28	PASS	AB=0.772;AC=22;AF=0.458;AN=48;BaseQRankSum=1.771;DP=646;FS=2.227;HRun=0;HaplotypeScore=140.9732;InbreedingCoeff=0.5412;MQ=66.85;MQ0=5;MQRankSum=-1.481;QD=5.66;ReadPosRankSum=1.565;VQSLOD=2.0686;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,14:57:26.18:256,0,26	0/1:13,0:14:5.05:5,0,8	./.	./.	0/0:17,0:17:14.77:0,15,161	0/1:15,7:24:28.64:291,0,29	1/1:18,13:41:29.04:472,29,0	./.	0/0:23,0:23:20.32:0,20,389	0/0:22,0:23:27.02:0,27,362	0/0:11,0:10:6.02:0,6,93	1/1:24,0:36:5.92:104,6,0	1/1:27,0:27:24.71:426,25,0	1/1:25,1:33:15.05:245,15,0	0/0:27,0:29:44.95:0,45,625	0/0:18,0:22:23.63:0,24,445	0/0:9,0:23:18.02:0,18,167	0/1:19,0:31:60.27:80,0,60	0/0:11,0:11:9.03:0,9,140	1/1:10,0:10:3:25,3,0	0/0:26,0:26:30.06:0,30,389	1/1:17,0:16:8.52:96,9,0	1/1:21,0:21:11.49:99,11,0	1/1:22,0:34:2.18:49,2,0	1/1:12,0:12:7.42:56,7,0	0/0:10,0:18:11.11:0,11,93	0/0:23,0:23:21.03:0,21,308	./.
chr10	92941102	.	TC	T	6768.42	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=17.299;DP=754;FS=6.508;HRun=3;HaplotypeScore=81.7017;InbreedingCoeff=0.9934;MQ=91.51;MQ0=1;MQRankSum=-8.007;QD=34.36;ReadPosRankSum=2.704;VQSLOD=5.4609;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,1819	0/0:13,0:13:36.12:0,36,518	0/0:31,0:31:81.21:0,81,1093	0/0:30,0:30:78.23:0,78,1079	0/0:32,0:32:96.32:0,96,1379	0/0:17,0:17:48.15:0,48,674	0/0:20,0:20:57.15:0,57,781	0/0:32,0:32:90.28:0,90,1260	0/0:24,0:24:72.24:0,72,1035	0/0:38,0:38:99:0,108,1492	0/0:21,0:21:60.20:0,60,862	1/1:0,23:23:66.21:818,66,0	1/1:0,23:23:69.22:855,69,0	1/1:1,19:20:51.16:632,51,0	0/0:32,0:32:90.30:0,90,1296	0/0:41,0:41:99:0,120,1697	0/0:30,0:30:90.28:0,90,1259	1/1:1,22:23:60.19:744,60,0	0/0:26,0:26:78.25:0,78,1104	0/0:18,0:18:54.18:0,54,768	0/0:29,0:28:81.22:0,81,1124	1/1:1,15:16:45.14:558,45,0	1/1:0,25:25:72.23:892,72,0	1/1:1,40:41:99:1376,111,0	1/1:0,26:26:72.23:893,72,0	0/0:41,0:41:99:0,123,1734	0/0:22,0:22:66.22:0,66,934	0/0:15,1:16:10.92:0,11,554
chr10	92941748	.	GTGTGTGTA	G	371.58	PASS	AB=0.996;AC=20;AF=0.455;AN=44;BaseQRankSum=0.412;DP=340;FS=0.000;HRun=0;HaplotypeScore=80.0226;InbreedingCoeff=0.0030;MQ=32.08;MQ0=63;MQRankSum=-1.416;QD=1.93;ReadPosRankSum=0.838;VQSLOD=1.0726;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:19:5.83:0,6,34	0/1:6,0:6:11.87:22,0,12	./.	./.	./.	1/1:8,0:8:1.76:8,2,0	0/1:27,0:19:8.47:80,0,8	0/1:15,0:13:32.30:32,0,117	1/1:8,0:8:7.81:41,8,0	0/0:9,0:7:19.05:0,19,121	./.	0/0:9,1:10:1.14:0,1,21	0/0:5,5:8:0.79:0,1,2	0/0:7,0:7:3.41:0,3,15	0/0:21,0:19:9.73:0,10,318	1/1:12,0:10:7.18:60,7,0	0/0:16,0:10:11.93:0,12,176	0/1:14,0:7:3.92:4,0,110	0/0:9,0:5:3.20:0,3,63	1/1:10,0:10:0.16:0,0,0	1/1:25,0:15:0.89:2,1,0	./.	1/1:10,0:9:1.21:18,1,0	0/1:33,1:28:41.90:172,0,42	./.	0/1:9,0:9:8.11:8,0,79	0/1:11,0:8:40.96:41,0,59	0/1:4,0:2:8.70:9,0,13
chr10	92941757	.	TGAGAGAGAGAGA	T	405.38	PASS	AB=0.923;AC=12;AF=0.316;AN=38;BaseQRankSum=3.580;DP=348;FS=3.996;HRun=0;HaplotypeScore=90.3050;InbreedingCoeff=0.3424;MQ=32.49;MQ0=53;MQRankSum=-4.069;QD=5.55;ReadPosRankSum=0.798;VQSLOD=1.5692;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:19:2.90:16,3,0	0/1:7,0:7:15.47:15,0,106	./.	./.	./.	0/0:9,0:9:5.88:0,6,259	0/0:30,0:22:23.36:0,23,1267	0/0:17,0:17:2.04:0,2,6	1/1:7,1:8:2.99:94,3,0	./.	./.	0/1:9,0:11:11.93:12,0,106	0/0:11,0:10:0:0,0,0	0/0:6,0:7:6.49:0,6,232	0/0:15,0:15:9.92:0,10,289	0/0:10,2:10:0.47:0,0,1	0/0:15,0:12:3.01:0,3,94	0/0:15,0:8:8.96:0,9,147	1/1:11,0:8:2.85:101,3,0	./.	./.	./.	0/0:14,0:13:6.02:0,6,188	0/0:34,0:29:17.57:0,18,543	./.	1/1:5,3:8:2.99:103,3,0	0/0:9,0:7:0.19:0,0,1	1/1:3,1:2:6.02:181,6,0
chr10	92942397	.	G	GC	6113.88	PASS	AB=0.549;AC=18;AF=0.321;AN=56;BaseQRankSum=-11.395;DP=623;FS=19.044;HRun=8;HaplotypeScore=67.0334;InbreedingCoeff=0.8791;MQ=72.44;MQ0=0;MQRankSum=-0.635;QD=26.70;ReadPosRankSum=2.678;VQSLOD=3.5182;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:13.96:0,14,34	0/0:11,0:11:33.02:0,33,301	0/0:22,0:22:14.38:0,14,349	0/0:18,0:18:36.08:0,36,287	0/0:22,0:22:57.01:0,57,517	0/0:16,0:16:45.02:0,45,411	0/0:29,0:29:72.02:0,72,658	0/1:4,16:20:6.79:434,0,7	0/0:19,0:19:48.02:0,48,438	0/0:17,0:17:39.02:0,39,356	0/0:14,0:14:36.02:0,36,329	1/1:1,15:17:39.12:450,39,0	1/1:0,24:24:69.20:796,69,0	1/1:4,25:29:41.74:734,42,0	0/0:26,0:26:69.03:0,69,631	0/0:40,0:40:99:0,105,952	0/0:22,1:23:25.44:0,25,487	1/1:4,29:33:78.23:900,78,0	0/0:19,0:19:30.73:0,31,322	0/0:17,0:17:48.02:0,48,438	0/0:48,0:48:99:0,123,1125	1/1:5,22:27:57.17:657,57,0	0/1:2,11:13:0.37:249,0,0	1/1:5,26:31:75.06:865,75,0	1/1:1,16:17:48.14:554,48,0	0/0:17,0:17:48.02:0,48,435	0/0:15,1:16:10.43:0,10,349	1/1:2,16:18:42.11:474,42,0
chr10	92942404	.	CCA	C	302.11	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.574;DP=620;FS=13.622;HRun=0;HaplotypeScore=97.6273;InbreedingCoeff=0.9981;MQ=76.20;MQ0=0;MQRankSum=1.072;QD=15.90;ReadPosRankSum=-0.910;VQSLOD=2.7126;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:30.07:397,30,0	0/0:14,0:14:42.06:0,42,610	0/0:20,0:20:49.98:0,50,755	0/0:21,0:21:52.92:0,53,688	0/0:23,0:23:66.18:0,66,1043	0/0:17,0:17:51.14:0,51,810	0/0:31,0:31:87.07:0,87,1317	0/0:23,0:23:61.27:0,61,614	0/0:17,0:17:51.16:0,51,813	0/0:14,0:14:39.13:0,39,661	0/0:13,0:13:36.05:0,36,548	0/0:18,0:18:41.84:0,42,365	0/0:25,0:25:70.74:0,71,594	0/0:27,0:27:70.87:0,71,667	0/0:26,0:26:78.17:0,78,1209	0/0:38,0:38:99:0,114,1840	0/0:26,0:26:75.15:0,75,1122	0/0:31,0:31:83.99:0,84,751	0/0:16,0:16:42.03:0,42,625	0/0:17,0:17:51.16:0,51,822	0/0:47,0:47:99:0,136,2180	0/0:24,0:24:59.92:0,60,527	0/0:12,0:12:27:0,27,255	0/0:30,0:30:86.97:0,87,773	0/0:18,0:18:54.01:0,54,495	0/0:19,0:19:54.15:0,54,854	0/0:16,0:16:48.14:0,48,759	0/0:18,0:18:42:0,42,376
chr10	92943189	.	C	CT	12666.90	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-8.691;DP=616;FS=81.062;HRun=0;HaplotypeScore=72.6810;InbreedingCoeff=0.9522;MQ=74.34;MQ0=1;MQRankSum=-1.550;QD=25.85;ReadPosRankSum=12.220;VQSLOD=0.9248;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:33:12.59:167,13,0	0/0:8,0:8:15.87:0,16,129	0/0:20,0:19:42.01:0,42,345	0/0:10,0:8:10.39:0,10,82	1/1:3,25:28:49.04:731,49,0	0/0:16,0:16:41.91:0,42,346	0/0:32,0:32:65.38:0,65,558	1/1:3,16:19:47.64:537,48,0	1/1:1,21:22:51.15:653,51,0	1/1:2,14:16:36.03:437,36,0	1/1:0,18:18:27.07:343,27,0	1/1:0,35:35:84.27:1082,84,0	1/1:1,18:19:42.13:536,42,0	1/1:1,24:25:33.33:459,33,0	0/0:15,0:15:32.90:0,33,269	1/1:0,17:17:39.02:482,39,0	0/0:25,0:25:67.06:0,67,556	1/1:1,22:23:24.38:593,24,0	1/1:0,23:23:69.15:818,69,0	1/1:2,16:18:35.88:400,36,0	1/1:1,54:56:99:1354,105,0	1/1:1,23:24:51.13:659,51,0	1/1:0,15:17:39.11:491,39,0	1/1:0,29:29:74.73:940,75,0	1/1:0,22:22:53.82:696,54,0	1/1:2,16:18:45.07:539,45,0	1/1:0,17:16:36.10:464,36,0	1/1:1,10:11:2.89:286,3,0
chr10	92943568	.	GT	G	20542.92	PASS	AB=0.909;AC=43;AF=0.768;AN=56;BaseQRankSum=18.880;DP=768;FS=0.629;HRun=2;HaplotypeScore=183.5203;InbreedingCoeff=0.9081;MQ=85.64;MQ0=0;MQRankSum=-6.272;QD=35.12;ReadPosRankSum=4.090;VQSLOD=4.3084;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,58:59:99:2061,160,0	0/1:9,1:10:8.92:9,0,325	0/0:33,0:33:96.17:0,96,1300	0/0:24,0:24:66.18:0,66,959	1/1:0,25:25:66.21:855,66,0	0/0:25,0:25:75.21:0,75,1055	0/0:22,0:22:66.21:0,66,968	1/1:0,27:27:81.25:1034,81,0	1/1:0,22:22:63.20:817,63,0	1/1:0,22:22:60.18:764,60,0	1/1:0,8:8:21.03:253,21,0	1/1:0,28:28:78.25:1003,78,0	1/1:0,26:26:72.23:933,72,0	1/1:0,28:28:78.25:1012,78,0	0/0:33,0:33:99:0,99,1463	1/1:0,40:40:99:1479,114,0	0/0:46,0:46:99:0,138,2047	1/1:0,32:32:93.30:1207,93,0	1/1:3,17:20:48.13:594,48,0	1/1:0,21:21:63.20:812,63,0	1/1:0,51:51:99:1790,138,0	1/1:0,19:19:51.17:661,51,0	1/1:2,16:18:39.12:506,39,0	1/1:0,34:34:99:1284,99,0	1/1:0,20:20:57.19:740,57,0	1/1:1,41:42:99:1593,123,0	1/1:1,24:25:74.83:941,75,0	1/1:0,8:8:15.05:195,15,0
chr10	92945209	.	T	TCAGA	30430.55	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-0.849;DP=709;FS=8.348;HRun=0;HaplotypeScore=136.9365;InbreedingCoeff=0.9998;MQ=86.42;MQ0=1;MQRankSum=-7.564;QD=62.74;ReadPosRankSum=1.749;VQSLOD=6.9323;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1942	0/0:16,0:16:48.16:0,48,928	0/0:25,0:25:72.21:0,72,1314	0/0:30,0:30:84.20:0,84,1458	1/1:4,22:27:44.82:1232,45,0	0/0:17,0:17:51.17:0,51,980	0/0:35,0:35:99:0,99,1910	1/1:12,18:32:90.29:2299,90,0	1/1:2,23:26:63.22:1723,63,0	1/1:6,17:24:69.24:1803,69,0	1/1:6,22:30:48.16:1313,48,0	1/1:2,21:23:57.14:1496,57,0	1/1:1,15:18:45.13:1201,45,0	1/1:6,21:29:72.25:1962,72,0	0/0:32,0:31:96.31:0,96,1825	1/1:5,23:29:72.25:1969,72,0	0/0:33,0:33:99:0,99,1884	1/1:5,21:26:63.41:1775,63,0	1/1:3,17:21:57.17:1490,57,0	1/1:0,17:19:45.15:1232,45,0	1/1:2,33:37:75.05:2052,75,0	1/1:4,15:19:42.14:1146,42,0	1/1:3,13:18:39.13:1064,39,0	1/1:3,18:21:36.23:984,36,0	1/1:2,17:21:36.12:985,36,0	1/1:7,16:24:69.23:1774,69,0	1/1:1,28:29:78.27:2108,78,0	1/1:1,10:11:30.10:822,30,0
chr10	92945553	.	G	GT	7986.65	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=4.405;DP=606;FS=0.000;HRun=2;HaplotypeScore=68.1797;InbreedingCoeff=0.9998;MQ=89.92;MQ0=0;MQRankSum=-0.978;QD=38.96;ReadPosRankSum=2.516;VQSLOD=5.3872;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.27:0,90,1102	0/0:9,0:9:27.07:0,27,322	0/0:27,0:27:59.70:0,60,920	0/0:19,0:19:48.06:0,48,549	0/0:24,0:24:69.20:0,69,842	0/0:26,0:26:78.25:0,78,967	0/0:24,0:24:69.20:0,69,842	1/1:2,29:31:87.27:1214,87,0	0/0:22,0:22:60.19:0,60,744	0/0:24,0:24:66.19:0,66,799	0/0:24,0:24:69.22:0,69,855	1/1:1,27:28:78.26:1123,78,0	1/1:3,24:27:69.23:989,69,0	1/1:0,20:20:57.19:821,57,0	0/0:25,0:25:69.20:0,69,843	0/0:24,0:24:72.21:0,72,870	0/0:18,0:18:54.14:0,54,643	1/1:0,12:12:36.12:518,36,0	0/0:19,0:19:54.16:0,54,659	0/0:17,0:17:51.16:0,51,632	0/0:29,0:29:75.22:0,75,916	1/1:0,17:17:51.17:729,51,0	1/1:1,12:13:36.12:518,36,0	1/1:0,25:25:69.23:994,69,0	1/1:1,15:16:42.14:604,42,0	0/0:17,0:17:48.13:0,48,565	0/0:22,0:21:66.16:0,66,778	1/1:2,14:16:33.11:475,33,0
chr10	92945708	.	G	GA	8266.31	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-14.816;DP=680;FS=1.327;HRun=6;HaplotypeScore=65.9193;InbreedingCoeff=0.9896;MQ=84.20;MQ0=0;MQRankSum=-2.475;QD=33.60;ReadPosRankSum=1.894;VQSLOD=4.9926;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,156,1591	0/0:11,0:11:33.05:0,33,323	0/0:17,0:17:8.13:0,8,338	0/0:24,0:24:57.10:0,57,562	0/0:24,0:24:57.13:0,57,581	0/0:23,0:23:57.12:0,57,582	0/0:20,0:20:54.10:0,54,544	1/1:4,26:30:78.23:966,78,0	0/0:21,0:21:57.13:0,57,582	0/0:29,0:29:81.17:0,81,821	0/0:28,0:28:75.16:0,75,765	1/1:2,24:26:69.22:868,69,0	1/1:2,28:30:81.26:1019,81,0	1/1:1,18:19:51.16:642,51,0	0/0:28,0:28:84.19:0,84,856	0/0:14,0:14:42.09:0,42,423	0/0:21,0:21:60.10:0,60,601	1/1:1,31:32:90.29:1128,90,0	0/0:28,0:28:81.18:0,81,826	0/0:18,0:18:51.12:0,51,520	0/0:31,0:31:87.17:0,87,879	1/1:1,19:20:54.13:661,54,0	1/1:3,24:27:63.20:793,63,0	1/1:1,24:25:69.22:868,69,0	1/1:0,23:23:66.21:830,66,0	0/0:21,0:21:60.14:0,60,612	0/0:22,0:22:60.13:0,60,611	1/1:0,14:14:39.12:491,39,0
chr10	92946124	.	A	ATGTGTGTG	1138.61	PASS	AB=0.988;AC=10;AF=0.179;AN=56;BaseQRankSum=-4.248;DP=511;FS=5.933;HRun=0;HaplotypeScore=200.4586;InbreedingCoeff=0.4847;MQ=56.59;MQ0=10;MQRankSum=-2.584;QD=7.69;ReadPosRankSum=-2.408;VQSLOD=1.9748;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,3:22:15.05:358,15,0	0/0:9,0:9:27.08:0,27,632	0/0:14,0:8:11.90:0,12,249	0/1:18,0:5:0:0,0,0	0/0:19,0:19:28.89:0,29,557	1/1:10,1:19:6.02:231,6,0	1/1:18,8:26:17.20:602,17,0	0/1:31,0:29:36.54:37,0,432	0/0:21,0:21:33.10:0,33,581	0/0:14,0:14:24.55:0,25,461	0/0:16,0:16:24.07:0,24,446	0/0:18,0:18:39.09:0,39,580	0/0:15,0:15:4.01:0,4,269	0/0:16,0:16:34.71:0,35,461	0/0:24,0:24:54.18:0,54,1287	0/0:16,0:16:24.07:0,24,431	0/0:31,0:29:54.14:0,54,1121	0/0:14,0:14:9.03:0,9,132	0/0:11,0:11:17.89:0,18,290	0/0:20,0:20:20.80:0,21,303	0/0:13,0:13:3.01:0,3,57	0/0:13,0:13:36.12:0,36,526	0/0:25,0:25:42.61:0,43,637	0/1:13,0:13:20.65:21,0,307	0/0:15,0:15:33.10:0,33,481	0/0:24,0:24:51.17:0,51,958	0/0:14,0:14:18.53:0,19,359	0/1:16,0:14:38.13:38,0,292
chr10	92946133	.	TGTGTGAGA	T	8473.91	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=7.591;DP=504;FS=0.911;HRun=0;HaplotypeScore=162.0141;InbreedingCoeff=0.0311;MQ=50.24;MQ0=12;MQRankSum=-8.273;QD=21.13;ReadPosRankSum=3.794;VQSLOD=4.2645;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:7.65:0,8,207	0/0:12,0:12:33.11:0,33,1119	0/0:18,0:6:14.49:0,14,202	0/1:24,0:3:3.33:3,0,14	1/1:2,17:22:30.57:665,31,0	0/1:20,0:20:20.66:21,0,153	0/1:24,0:22:64.44:64,0,325	0/1:26,0:24:26.35:26,0,765	1/1:0,17:18:36.12:993,36,0	1/1:0,8:10:30.09:698,30,0	1/1:1,17:18:24.08:602,24,0	0/1:16,0:16:99:231,0,175	0/1:14,0:14:99:190,0,155	0/1:16,0:16:69.36:329,0,69	0/0:22,0:22:63.19:0,63,1815	1/1:2,15:17:20.87:578,21,0	0/0:29,0:27:52.98:0,53,1051	0/1:11,0:11:69.80:94,0,70	1/1:3,7:10:24.03:481,24,0	1/1:2,22:24:20.49:530,20,0	1/1:0,12:12:3.01:84,3,0	0/1:14,0:14:99:196,0,180	0/1:24,0:24:99:334,0,184	0/1:13,0:13:84.95:85,0,173	0/1:16,0:16:99:260,0,119	1/1:0,18:22:66.20:1354,66,0	1/1:0,13:14:18.06:468,18,0	0/1:15,0:13:99:186,0,204
chr10	92946137	.	TGAGAGAGA	T	8049.08	PASS	AB=1.000;AC=39;AF=0.722;AN=54;BaseQRankSum=6.512;DP=507;FS=2.570;HRun=0;HaplotypeScore=164.5647;InbreedingCoeff=0.7789;MQ=50.02;MQ0=13;MQRankSum=-8.174;QD=24.17;ReadPosRankSum=2.690;VQSLOD=4.7133;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:11.06:0,11,225	0/0:10,0:13:27.09:0,27,1023	0/0:17,0:5:2.99:0,3,24	./.	1/1:21,0:22:24.88:342,25,0	0/0:18,0:18:15.88:0,16,207	0/0:24,0:22:23.47:0,23,315	1/1:19,1:24:18.04:325,18,0	1/1:18,0:18:36.08:561,36,0	1/1:10,0:10:19.23:301,19,0	1/1:17,0:18:23.67:330,24,0	1/1:6,8:16:24.08:553,24,0	1/1:5,8:13:15.05:383,15,0	1/1:3,14:17:30.10:722,30,0	0/0:21,0:24:57.15:0,57,1779	1/1:17,0:17:20.86:360,21,0	0/0:7,0:28:25.80:0,26,710	1/1:2,8:10:14.98:273,15,0	0/1:11,0:10:24.57:165,0,25	1/1:24,0:24:0.46:257,0,0	1/1:12,0:12:3.01:49,3,0	1/1:4,8:14:24.04:498,24,0	1/1:7,15:24:34.42:783,34,0	1/1:8,5:14:12.01:231,12,0	1/1:3,10:15:27.09:614,27,0	1/1:22,0:22:19.31:504,19,0	1/1:14,0:14:18.06:271,18,0	1/1:7,5:13:24.08:527,24,0
chr10	92946343	.	TC	T	6055.77	PASS	AB=0.955;AC=41;AF=0.732;AN=56;BaseQRankSum=-0.134;DP=509;FS=1.042;HRun=10;HaplotypeScore=60.6053;InbreedingCoeff=0.6213;MQ=74.11;MQ0=1;MQRankSum=-1.256;QD=14.15;ReadPosRankSum=5.639;VQSLOD=4.8701;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,29:40:61.84:754,62,0	0/0:3,0:3:3.01:0,3,33	0/1:18,0:17:21.44:21,0,161	0/0:20,0:19:24.77:0,25,213	1/1:6,10:16:26.18:223,26,0	0/0:20,0:20:39.47:0,39,388	0/1:27,3:28:23.59:24,0,411	0/1:21,1:22:33.30:33,0,115	1/1:3,16:19:35.97:308,36,0	1/1:1,9:10:17.96:152,18,0	1/1:5,13:18:38.99:338,39,0	1/1:5,19:25:50:422,50,0	1/1:4,12:16:23.99:208,24,0	1/1:5,23:28:53.98:467,54,0	0/0:16,1:17:0.13:0,0,200	1/1:2,11:13:23.99:208,24,0	0/0:17,0:17:27.08:0,27,272	1/1:2,18:21:55.06:454,55,0	1/1:8,9:17:31.47:251,31,0	1/1:3,9:12:26.98:234,27,0	1/1:11,26:39:61.05:507,61,0	1/1:4,6:11:16.84:132,17,0	1/1:1,17:18:44.99:390,45,0	1/1:4,15:18:29.99:260,30,0	1/1:2,7:10:17.03:136,17,0	1/1:3,9:12:26.92:220,27,0	1/1:1,13:14:35.99:312,36,0	0/0:4,0:4:9.01:0,9,91
chr10	92947767	.	GC	G	17025.25	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=10.922;DP=669;FS=7.154;HRun=2;HaplotypeScore=71.4859;InbreedingCoeff=0.9999;MQ=82.89;MQ0=0;MQRankSum=-4.371;QD=36.38;ReadPosRankSum=4.374;VQSLOD=5.3370;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1607	0/0:14,0:14:42.09:0,42,582	0/0:19,0:19:48.05:0,48,700	0/0:19,0:19:51.90:0,52,754	1/1:0,24:24:72.23:933,72,0	0/0:19,0:19:57.18:0,57,833	0/0:30,0:30:90.25:0,90,1267	1/1:0,25:25:75.23:958,75,0	1/1:1,24:25:72.23:933,72,0	1/1:0,22:22:63.18:797,63,0	1/1:0,14:14:42.10:525,42,0	1/1:0,29:29:87.28:1122,87,0	1/1:1,25:26:75.24:964,75,0	1/1:0,23:23:63.20:815,63,0	0/0:26,0:26:78.24:0,78,1130	1/1:0,24:24:69.22:895,69,0	0/0:35,0:35:99:0,105,1459	1/1:0,31:31:81.26:1051,81,0	1/1:1,25:26:72.23:933,72,0	1/1:1,12:13:36.12:466,36,0	1/1:0,37:37:99:1323,102,0	1/1:0,19:19:51.17:662,51,0	1/1:1,10:11:30.10:383,30,0	1/1:1,44:45:99:1635,126,0	1/1:0,16:16:45.15:583,45,0	1/1:0,23:23:66.20:843,66,0	1/1:0,19:19:48.16:622,48,0	1/1:1,15:16:45.15:583,45,0
chr10	92948887	.	G	GC	1286.60	PASS	AB=0.755;AC=28;AF=0.500;AN=56;BaseQRankSum=-6.063;DP=426;FS=7.983;HRun=11;HaplotypeScore=56.4090;InbreedingCoeff=-0.0216;MQ=73.70;MQ0=0;MQRankSum=-0.381;QD=4.80;ReadPosRankSum=-3.004;VQSLOD=0.1644;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:32:50.92:0,51,149	0/1:5,1:6:18.53:19,0,58	0/0:13,0:11:7.30:0,7,37	0/1:15,0:13:15.21:15,0,31	1/1:7,5:12:6.01:61,6,0	0/0:2,0:34:52.95:0,53,154	0/0:5,0:26:34.61:0,35,100	0/1:13,0:15:0:0,0,0	0/1:6,8:14:11.24:79,0,11	0/0:9,1:10:5.95:0,6,46	0/1:2,4:6:14.01:51,0,14	0/1:5,11:16:0.88:162,0,1	0/1:10,6:16:18.55:19,0,57	1/1:5,7:12:9.01:91,9,0	0/0:19,0:19:41.80:0,42,323	1/1:1,1:10:8.68:55,9,0	0/0:24,0:24:32.73:0,33,394	0/1:11,11:22:13.41:241,0,13	0/1:17,3:20:43.87:112,0,44	0/1:8,1:9:17.23:19,0,17	0/1:10,8:18:34.41:49,0,34	1/1:6,7:13:6.01:60,6,0	0/1:6,1:7:21.73:22,0,26	1/1:2,5:7:6.01:61,6,0	0/1:7,8:15:13.80:51,0,14	1/1:6,3:9:3.01:31,3,0	0/1:8,12:20:16.38:210,0,16	1/1:6,0:6:5.99:48,6,0
chr10	92949998	.	GTCC	G	8134.13	PASS	AB=1.000;AC=54;AF=0.964;AN=56;BaseQRankSum=0.464;DP=363;FS=0.000;HRun=0;HaplotypeScore=125.8057;InbreedingCoeff=-0.0614;MQ=66.53;MQ0=1;MQRankSum=-4.609;QD=22.41;ReadPosRankSum=3.154;VQSLOD=4.8281;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,3:19:38.78:507,39,0	1/1:2,2:4:6.02:79,6,0	0/1:13,0:11:48.43:48,0,159	0/1:13,0:9:28.44:28,0,108	1/1:14,3:17:11.60:151,12,0	1/1:17,1:18:36.12:525,36,0	1/1:23,0:23:48.12:655,48,0	1/1:14,4:18:27.09:409,27,0	1/1:13,4:17:33.07:443,33,0	1/1:7,2:9:9.02:124,9,0	1/1:8,0:8:12.04:184,12,0	1/1:9,10:19:39.13:603,39,0	1/1:5,7:12:27.03:376,27,0	1/1:4,10:14:36.10:517,36,0	1/1:16,7:23:38.19:539,38,0	1/1:8,4:12:26.94:308,27,0	1/1:11,3:14:20.93:252,21,0	1/1:3,4:7:12.04:194,12,0	1/1:6,1:7:11.71:144,12,0	1/1:4,1:5:9.02:110,9,0	1/1:13,1:14:6.01:73,6,0	1/1:6,3:9:9.03:136,9,0	1/1:2,2:4:6.02:79,6,0	1/1:3,7:10:11.83:189,12,0	1/1:10,8:18:39.11:543,39,0	1/1:17,0:17:24.03:343,24,0	1/1:10,3:12:21.05:289,21,0	1/1:2,4:6:18.06:285,18,0
chr10	92950000	.	C	CA	7262.95	PASS	AB=0.844;AC=54;AF=0.964;AN=56;BaseQRankSum=1.389;DP=248;FS=0.000;HRun=0;HaplotypeScore=104.8445;InbreedingCoeff=-0.0612;MQ=77.27;MQ0=1;MQRankSum=-4.739;QD=29.29;ReadPosRankSum=2.722;VQSLOD=4.6932;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,11:15:39.01:447,39,0	1/1:2,0:2:6.02:81,6,0	0/1:9,1:11:95.38:133,0,95	0/1:11,1:9:97.43:97,0,113	1/1:3,6:9:12.51:167,13,0	1/1:2,10:12:36.11:457,36,0	1/1:3,14:17:51.14:632,51,0	1/1:4,6:10:29.96:327,30,0	1/1:4,7:11:31.27:342,31,0	1/1:2,1:3:9.03:116,9,0	1/1:0,5:5:12.04:161,12,0	1/1:10,3:13:39.08:416,39,0	1/1:8,1:9:27:287,27,0	1/1:11,2:13:38.96:432,39,0	1/1:7,8:15:41.34:470,41,0	1/1:5,4:9:24.54:310,25,0	1/1:5,4:9:21.02:252,21,0	1/1:5,0:5:15.01:172,15,0	1/1:1,3:4:12.04:162,12,0	1/1:1,2:3:9.03:134,9,0	1/1:3,1:4:6.02:90,6,0	1/1:3,3:6:9.03:119,9,0	1/1:2,0:2:6.02:78,6,0	1/1:8,1:9:12.50:141,13,0	1/1:8,7:15:39.11:479,39,0	1/1:1,9:10:25.32:267,25,0	1/1:4,3:6:21.06:269,21,0	1/1:4,2:6:18.06:225,18,0
chr10	92950001	.	C	CT	1830.22	PASS	AB=1.000;AC=54;AF=0.964;AN=56;BaseQRankSum=3.836;DP=238;FS=18.850;HRun=1;HaplotypeScore=121.7903;InbreedingCoeff=-0.0725;MQ=73.26;MQ0=1;MQRankSum=-3.893;QD=7.69;ReadPosRankSum=0.877;VQSLOD=-0.3437;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,11:14:14.59:79,15,0	1/1:2,0:2:5.65:28,6,0	0/1:10,0:8:69.14:69,0,74	0/1:11,0:8:21.38:21,0,129	1/1:3,6:9:10.47:46,10,0	1/1:2,10:12:27.93:150,28,0	1/1:2,14:16:38.64:160,39,0	1/1:5,4:9:23.52:127,24,0	1/1:6,5:11:9.94:65,10,0	1/1:2,1:3:7.49:40,7,0	1/1:1,4:5:10.62:61,11,0	1/1:10,3:13:23.13:71,23,0	1/1:8,1:9:5.57:33,6,0	1/1:10,2:12:17.26:79,17,0	1/1:8,6:14:19.41:125,19,0	1/1:5,4:9:5.39:54,5,0	1/1:5,4:9:12.34:63,12,0	1/1:5,0:5:11.84:78,12,0	1/1:1,3:4:10.83:58,11,0	1/1:1,2:3:8.61:46,9,0	1/1:3,1:4:5.27:24,5,0	1/1:3,3:6:7.86:39,8,0	1/1:2,0:2:3.63:14,4,0	1/1:8,1:9:7.95:31,8,0	1/1:10,4:14:30.04:105,30,0	1/1:1,9:10:4.65:78,5,0	1/1:4,3:6:16.76:69,17,0	1/1:6,0:6:17.35:117,17,0
chr10	92950006	.	TTC	T	4162.56	PASS	AB=0.875;AC=48;AF=0.857;AN=56;BaseQRankSum=2.556;DP=216;FS=0.000;HRun=0;HaplotypeScore=109.0544;InbreedingCoeff=0.3990;MQ=64.75;MQ0=1;MQRankSum=-2.776;QD=20.51;ReadPosRankSum=5.981;VQSLOD=3.6804;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,11:14:24.83:241,25,0	1/1:2,0:2:6.01:64,6,0	0/1:8,0:6:3.09:3,0,129	0/0:8,0:5:13.19:0,13,99	1/1:3,6:9:1.52:23,2,0	1/1:1,10:11:32.12:341,32,0	1/1:0,14:14:42.09:440,42,0	1/1:4,4:8:24.06:265,24,0	1/1:6,5:11:29.97:259,30,0	0/1:2,1:3:2.23:26,0,2	1/1:0,4:4:0.58:21,1,0	1/1:10,3:13:35.99:318,36,0	1/1:7,1:8:21.49:195,21,0	1/1:10,2:12:24.04:220,24,0	1/1:7,6:13:37.53:369,38,0	1/1:4,4:8:20.25:194,20,0	1/1:4,4:8:17.53:167,18,0	1/1:4,0:4:12.04:154,12,0	1/1:1,3:4:9.01:99,9,0	0/0:1,2:3:0.89:0,1,2	0/0:1,1:2:1.25:0,1,3	1/1:3,3:6:0.60:22,1,0	1/1:2,0:2:2.98:22,3,0	1/1:7,1:8:7.68:75,8,0	1/1:9,4:13:26.18:218,26,0	1/1:1,9:10:12.39:163,12,0	1/1:3,3:6:12.10:126,12,0	1/1:4,0:4:12.03:139,12,0
chr10	92950011	.	T	TCA	4829.25	PASS	AC=48;AF=0.923;AN=52;BaseQRankSum=1.455;DP=210;FS=0.000;HRun=0;HaplotypeScore=104.2742;InbreedingCoeff=0.4781;MQ=62.46;MQ0=1;MQRankSum=-3.914;QD=25.42;ReadPosRankSum=3.700;VQSLOD=5.6070;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:14:29.66:325,30,0	1/1:0,0:2:5.94:41,6,0	0/0:7,0:5:1.56:0,2,40	0/0:8,0:5:14.77:0,15,118	1/1:8,0:9:3.01:31,3,0	1/1:10,1:11:33.02:328,33,0	1/1:14,0:14:42.02:424,42,0	1/1:4,4:8:24.08:320,24,0	1/1:8,0:10:29.40:318,29,0	1/1:2,0:2:3.01:38,3,0	1/1:4,0:4:3.01:32,3,0	1/1:3,10:13:36.09:395,36,0	1/1:1,7:8:22.61:245,23,0	1/1:2,10:12:26.66:278,27,0	1/1:6,0:13:28.50:366,28,0	1/1:5,0:8:20.71:210,21,0	1/1:5,0:8:17.89:169,18,0	1/1:0,4:4:12.04:185,12,0	1/1:3,0:4:11.24:105,11,0	./.	./.	1/1:4,0:4:2.98:32,3,0	1/1:0,2:2:3.01:36,3,0	1/1:1,7:8:9.19:98,9,0	1/1:4,8:12:24.07:274,24,0	1/1:10,0:10:20.26:230,20,0	1/1:3,0:5:15.05:183,15,0	1/1:0,4:4:12.04:166,12,0
chr10	92958689	.	T	TC	1957.36	PASS	AB=0.761;AC=21;AF=0.375;AN=56;BaseQRankSum=-3.313;DP=439;FS=2.258;HRun=10;HaplotypeScore=59.2931;InbreedingCoeff=0.4657;MQ=86.01;MQ0=0;MQRankSum=-2.519;QD=9.84;ReadPosRankSum=0.084;VQSLOD=2.4279;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:8.94:68,9,0	0/0:7,0:7:14.98:0,15,123	0/0:21,0:23:35.42:0,35,271	0/1:14,0:15:3.51:4,0,122	0/0:9,0:10:23.01:0,23,178	0/1:7,2:9:16.39:26,0,16	0/1:7,7:17:12.81:55,0,13	0/1:13,3:17:15.62:54,0,16	0/0:18,0:18:49.98:0,50,399	0/0:15,0:17:34.03:0,34,258	0/0:9,0:10:25.98:0,26,199	1/1:1,11:12:6.02:64,6,0	1/1:8,10:18:27.06:283,27,0	0/1:8,3:11:3.62:152,0,4	0/0:23,0:27:60.02:0,60,458	0/0:14,0:15:34.97:0,35,273	0/0:24,0:25:58.94:0,59,470	0/1:6,8:15:36.46:223,0,36	0/0:15,1:17:6.01:0,6,245	0/0:11,0:11:17.94:0,18,148	0/0:23,0:23:49.95:0,50,400	1/1:10,7:18:10.44:328,10,0	1/1:5,11:16:8.47:295,8,0	0/1:11,12:23:1.17:400,0,1	1/1:1,9:10:15.04:160,15,0	0/0:13,0:15:28.04:0,28,209	0/0:22,0:22:44.88:0,45,366	1/1:1,5:6:3.01:32,3,0
chr10	92959160	.	GCTCCC	G	4791.81	PASS	AB=0.965;AC=23;AF=0.426;AN=54;BaseQRankSum=8.162;DP=413;FS=45.676;HRun=0;HaplotypeScore=149.2406;InbreedingCoeff=-0.6145;MQ=56.60;MQ0=0;MQRankSum=-11.618;QD=14.30;ReadPosRankSum=10.421;VQSLOD=1.6342;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:47.76:0,48,361	./.	0/0:5,0:5:9.73:0,10,134	0/0:18,0:13:12.37:0,12,344	0/1:9,1:10:34.88:71,0,35	1/1:14,2:16:4.22:404,4,0	0/1:21,0:21:99:245,0,159	0/1:17,0:17:99:125,0,259	0/1:17,0:17:53.74:295,0,54	0/1:17,1:18:99:189,0,180	0/1:9,1:10:19:125,0,19	0/1:28,1:29:99:493,0,104	0/1:14,0:14:11.69:278,0,12	0/1:16,0:16:20.23:273,0,20	0/0:8,0:8:20.98:0,21,329	0/1:22,1:24:86.31:421,0,86	0/0:18,0:18:45.25:0,45,695	0/1:12,2:14:70.63:234,0,71	0/1:15,0:15:99:130,0,114	0/1:10,1:11:20.74:211,0,21	0/1:18,0:18:95.60:97,0,96	0/1:10,0:10:22.47:199,0,22	0/1:12,1:13:95.54:114,0,96	0/1:18,0:18:99:167,0,103	0/1:6,0:6:32.72:101,0,33	0/1:19,3:22:99:388,0,184	0/1:10,0:10:17.91:191,0,18	0/1:6,0:6:41.63:42,0,59
chr10	92959162	.	TCCCCC	T	7977.56	PASS	AC=44;AF=0.815;AN=54;BaseQRankSum=0.785;DP=413;FS=42.718;HRun=15;HaplotypeScore=138.2777;InbreedingCoeff=0.8387;MQ=57.95;MQ0=0;MQRankSum=-4.980;QD=23.67;ReadPosRankSum=6.155;VQSLOD=0.1305;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:24:38.49:0,38,226	./.	0/0:7,0:6:0.72:0,1,57	0/0:16,0:11:9.04:0,9,267	1/1:5,4:10:8.98:126,9,0	1/1:4,12:16:39.07:627,39,0	1/1:12,10:22:26.86:434,27,0	1/1:10,7:17:14.68:241,15,0	1/1:5,10:16:32.98:512,33,0	1/1:9,9:18:23.85:386,24,0	1/1:4,7:11:11.98:173,12,0	1/1:9,19:29:50.98:801,51,0	1/1:1,12:14:32.22:484,32,0	1/1:5,13:18:29.92:472,30,0	0/0:8,0:9:14.98:0,15,275	1/1:9,15:24:44.96:705,45,0	0/0:19,0:20:36.72:0,37,535	1/1:7,7:14:23.94:386,24,0	1/1:6,6:15:20.31:266,20,0	1/1:4,7:11:18.02:289,18,0	1/1:13,6:19:9.25:189,9,0	1/1:4,6:10:20.95:308,21,0	1/1:7,6:13:11.77:193,12,0	1/1:7,11:18:20.86:326,21,0	1/1:2,4:6:12:183,12,0	1/1:11,8:20:16.18:491,16,0	1/1:1,8:10:18.04:289,18,0	1/1:3,3:6:5.98:96,6,0
chr10	92960636	.	T	TG	696.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.702;DP=590;FS=4.248;HRun=5;HaplotypeScore=61.4868;InbreedingCoeff=0.9188;MQ=82.51;MQ0=0;MQRankSum=-3.224;QD=24.88;ReadPosRankSum=-1.368;VQSLOD=2.4158;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:61.08:791,61,0	0/0:7,0:7:12.03:0,12,129	0/0:18,0:18:25.70:0,26,228	0/0:16,0:16:20.90:0,21,353	0/0:20,0:20:41.80:0,42,451	0/0:23,0:23:54.13:0,54,580	0/0:26,0:26:75.16:0,75,796	0/0:28,0:28:66.13:0,66,691	0/0:21,0:21:63.12:0,63,659	0/0:17,0:17:51.13:0,51,548	0/0:14,0:14:29.83:0,30,322	0/0:32,0:32:93.23:0,93,1000	0/0:24,0:24:63.15:0,63,677	0/0:33,0:33:90.22:0,90,967	0/0:27,0:27:78.15:0,78,818	0/0:25,0:25:69.17:0,69,741	0/0:32,0:32:93.23:0,93,1000	0/0:32,0:32:90.22:0,90,967	0/0:14,0:14:33.06:0,33,346	0/0:12,0:12:24.04:0,24,249	0/0:23,0:23:60.14:0,60,644	0/0:17,0:17:25.30:0,25,261	0/0:7,0:7:15.01:0,15,161	0/0:35,0:35:99:0,102,1096	0/0:16,0:16:33.07:0,33,354	0/0:16,0:16:30.07:0,30,323	0/0:22,0:22:60.15:0,60,645	0/0:5,0:5:12.03:0,12,129
chr10	92961509	.	GT	G	4180.99	PASS	AC=46;AF=0.958;AN=48;BaseQRankSum=-1.732;DP=150;FS=4.943;HRun=1;HaplotypeScore=40.2394;InbreedingCoeff=0.2046;MQ=61.96;MQ0=0;MQRankSum=-1.665;QD=28.25;ReadPosRankSum=-0.151;VQSLOD=3.0963;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:12.04:157,12,0	1/1:0,1:1:3.01:41,3,0	1/1:2,1:4:6.49:76,6,0	0/0:2,0:1:3.01:0,3,40	1/1:0,3:3:2.98:42,3,0	1/1:0,2:2:3.01:42,3,0	1/1:0,14:14:29.96:415,30,0	1/1:0,7:7:21.06:276,21,0	1/1:0,3:3:9.03:124,9,0	1/1:0,4:4:9.03:122,9,0	1/1:0,4:4:2.98:41,3,0	1/1:0,11:11:27.09:363,27,0	1/1:0,5:5:12.04:166,12,0	1/1:0,8:8:12:165,12,0	1/1:0,2:2:6.02:83,6,0	./.	1/1:0,8:8:18.06:251,18,0	1/1:0,9:9:27.09:376,27,0	1/1:0,6:6:18.04:233,18,0	1/1:1,0:1:3.01:41,3,0	1/1:0,28:28:33.11:461,33,0	./.	./.	1/1:0,9:9:18.06:248,18,0	1/1:0,2:2:3:42,3,0	1/1:0,10:10:24.08:334,24,0	1/1:0,2:2:6.02:83,6,0	./.
chr10	92962777	.	AAG	A	18642.95	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=14.042;DP=709;FS=3.582;HRun=0;HaplotypeScore=86.3495;InbreedingCoeff=0.9674;MQ=82.02;MQ0=1;MQRankSum=-3.187;QD=37.14;ReadPosRankSum=2.329;VQSLOD=7.1816;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,2242	0/0:14,0:14:39.13:0,39,708	0/0:25,0:25:69.20:0,69,1134	0/0:19,0:19:42:0,42,637	1/1:0,18:18:54.18:764,54,0	0/0:20,0:20:54.19:0,54,983	0/0:23,0:23:69.21:0,69,1202	1/1:2,42:44:99:1697,126,0	1/1:1,31:32:84.28:1204,84,0	1/1:0,25:25:72.22:999,72,0	1/1:0,14:14:42.10:578,42,0	1/1:2,24:26:66.18:912,66,0	1/1:2,34:36:96.32:1368,96,0	1/1:2,20:22:51.17:731,51,0	0/0:27,0:27:78.25:0,78,1370	1/1:1,29:30:75.25:1075,75,0	0/0:34,0:34:99:0,99,1790	1/1:1,22:23:2.19:719,2,0	1/1:1,15:16:45.12:603,45,0	1/1:1,18:19:48.12:664,48,0	1/1:2,36:38:93.31:1332,93,0	1/1:0,20:19:48.12:665,48,0	1/1:0,22:22:60.12:837,60,0	1/1:0,35:35:87.29:1246,87,0	1/1:1,14:15:39.13:558,39,0	1/1:0,26:26:75.25:1068,75,0	1/1:1,28:29:84.28:1195,84,0	1/1:1,11:12:30.10:430,30,0
chr10	92963223	.	TGGGG	T	5463.14	PASS	AB=0.802;AC=22;AF=0.393;AN=56;BaseQRankSum=6.328;DP=467;FS=24.487;HRun=13;HaplotypeScore=84.4617;InbreedingCoeff=0.7367;MQ=62.75;MQ0=0;MQRankSum=-1.338;QD=23.65;ReadPosRankSum=9.737;VQSLOD=0.7170;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:26:3.55:23,0,4	0/0:3,0:5:5.88:0,6,36	0/1:11,0:8:19.16:19,0,177	0/0:8,0:6:12.04:0,12,229	0/0:10,0:12:9.45:0,9,217	0/0:16,0:16:15.05:0,15,300	0/0:22,0:29:57.10:0,57,1166	1/1:11,1:23:4.77:61,5,0	0/0:17,0:18:20.93:0,21,406	0/0:5,0:8:9.03:0,9,167	0/0:5,0:5:6.02:0,6,131	1/1:5,29:34:81.25:1185,81,0	1/1:1,8:9:18.06:263,18,0	1/1:4,33:37:87.24:1272,87,0	0/0:7,0:13:21.05:0,21,318	0/0:15,0:15:18.06:0,18,380	0/0:23,0:25:51.07:0,51,932	1/1:1,26:27:72.23:1053,72,0	0/0:12,0:12:12.02:0,12,170	0/0:4,0:4:0:0,0,0	0/0:34,0:40:40.75:0,41,619	1/1:1,5:6:15.05:219,15,0	1/1:2,7:9:21.06:307,21,0	1/1:7,19:26:48.10:702,48,0	1/1:5,12:17:24.01:350,24,0	0/0:13,0:13:7.27:0,7,99	0/0:13,0:13:27.09:0,27,562	1/1:1,0:5:2.91:9,3,0
chr10	92964403	.	GCAGGGCGGGGCACAGGGCGGGGCACAGGGCGGGGCA	G	9768.71	PASS	AB=1.000;AC=40;AF=0.741;AN=54;BaseQRankSum=3.918;DP=332;FS=8.387;HRun=0;HaplotypeScore=265.8869;InbreedingCoeff=0.5875;MQ=69.11;MQ0=0;MQRankSum=-3.966;QD=35.65;ReadPosRankSum=2.210;VQSLOD=1.9004;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:17:33.96:0,34,1431	0/0:2,0:2:3.01:0,3,365	0/0:9,0:8:14.82:0,15,196	0/0:9,0:10:11.06:0,11,493	1/1:1,11:12:3.01:276,3,0	0/1:4,0:4:36.97:37,0,113	0/1:17,0:17:79.87:80,0,645	1/1:6,0:6:2.97:20,3,0	./.	1/1:1,16:17:32.59:727,33,0	1/1:5,0:5:5.99:72,6,0	1/1:24,0:24:29.37:968,29,0	1/1:12,0:12:16.98:344,17,0	1/1:12,0:12:26.42:926,26,0	0/0:2,0:2:6.02:0,6,455	1/1:2,15:17:6.02:551,6,0	0/0:13,0:13:27.03:0,27,1451	1/1:18,0:18:35.61:519,36,0	1/1:1,11:12:32.54:792,33,0	1/1:3,0:3:5.95:61,6,0	1/1:24,0:24:22.81:219,23,0	1/1:11,0:11:8.97:321,9,0	1/1:8,0:8:8.96:512,9,0	1/1:20,0:20:28.35:672,28,0	1/1:12,0:12:17.96:949,18,0	1/1:4,0:4:11.63:71,12,0	1/1:2,26:28:5.80:551,6,0	1/1:1,7:8:12.04:1102,12,0
chr10	92964406	.	GGGCGGGGC	G	1247.85	PASS	AB=0.921;AC=16;AF=0.286;AN=56;BaseQRankSum=7.746;DP=312;FS=1.529;HRun=0;HaplotypeScore=133.3549;InbreedingCoeff=-0.2778;MQ=65.31;MQ0=0;MQRankSum=-6.442;QD=5.86;ReadPosRankSum=6.282;VQSLOD=2.1715;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:4.95:5,0,551	0/0:2,0:2:6.02:0,6,156	0/0:7,0:6:18.04:0,18,261	0/0:9,0:9:21.07:0,21,415	0/1:11,0:11:45.28:45,0,51	0/0:4,0:4:12.04:0,12,228	0/0:16,0:16:45.14:0,45,813	0/0:6,0:6:18.06:0,18,334	0/0:5,0:5:12.04:0,12,220	0/1:17,0:17:84.59:85,0,210	0/0:5,0:5:12.04:0,12,220	0/1:15,3:18:99:151,0,323	0/1:9,1:10:55.94:56,0,292	0/1:9,3:12:99:161,0,245	0/0:2,0:2:6.02:0,6,139	0/1:17,0:17:87.16:91,0,87	0/0:13,0:13:33.11:0,33,733	0/1:15,1:16:26.49:26,0,457	0/1:12,0:12:81.68:82,0,226	0/0:3,0:3:6.02:0,6,114	0/0:23,0:23:39.36:0,39,771	0/1:10,1:11:36.52:37,0,188	0/1:6,2:8:65.26:107,0,65	0/1:16,3:19:96.21:96,0,229	0/1:9,3:12:99:171,0,133	0/0:4,0:4:12.04:0,12,227	1/1:26,0:25:5.94:103,6,0	0/1:8,0:8:41.48:190,0,41
chr10	92964415	.	ACAGGGCGGGGCACAGGGCGGGGCACAGG	A	5481.32	PASS	AB=0.880;AC=17;AF=0.315;AN=54;BaseQRankSum=7.932;DP=260;FS=3.724;HRun=0;HaplotypeScore=183.3265;InbreedingCoeff=-0.0586;MQ=57.49;MQ0=0;MQRankSum=-6.429;QD=31.87;ReadPosRankSum=7.604;VQSLOD=2.5738;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:33.09:0,33,1165	0/0:3,0:3:9.03:0,9,662	0/0:5,0:5:15.05:0,15,287	0/0:5,0:5:10.59:0,11,389	0/1:11,0:11:13.96:188,0,14	0/0:4,0:4:12.04:0,12,230	0/0:13,0:13:36.12:0,36,656	0/0:1,0:1:3.01:0,3,43	./.	0/1:16,0:16:99:348,0,526	0/0:3,0:3:6.02:0,6,74	0/1:11,3:14:99:580,0,203	0/1:8,1:9:99:184,0,177	0/1:7,3:10:99:583,0,186	0/0:2,0:2:6.02:0,6,370	1/1:15,0:15:6.02:387,6,0	0/0:11,0:11:27.09:0,27,1225	0/1:12,1:13:99:172,0,396	0/1:11,0:11:99:354,0,411	0/0:3,0:3:6.02:0,6,72	0/0:19,0:19:22.95:0,23,256	0/1:7,1:8:10.23:197,0,10	0/1:4,2:6:23.95:341,0,24	0/1:12,3:15:99:374,0,238	0/1:8,3:11:53.44:612,0,53	0/0:4,0:4:12.04:0,12,160	1/1:26,0:25:4.65:386,5,0	1/1:7,0:7:12.04:775,12,0
chr10	92964796	.	TTCATTACTGTC	T	2892.30	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.658;DP=605;FS=1.559;HRun=0;HaplotypeScore=194.2816;InbreedingCoeff=0.9780;MQ=91.24;MQ0=0;MQRankSum=-8.703;QD=87.65;ReadPosRankSum=0.770;VQSLOD=3.4931;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,6669	0/0:7,0:7:21.07:0,21,1224	0/0:30,0:30:87.77:0,88,4307	0/0:24,0:24:72.25:0,72,3605	0/0:14,0:14:39.13:0,39,2312	1/1:0,16:16:42.14:1563,42,0	1/1:0,17:17:39.13:1451,39,0	0/0:25,0:25:75.26:0,75,3767	0/0:15,0:15:45.15:0,45,2658	0/0:23,0:23:69.24:0,69,3809	0/0:6,0:6:18.06:0,18,930	0/0:22,0:22:66.21:0,66,3553	0/0:29,0:29:87.30:0,87,5065	0/0:26,0:26:78.27:0,78,4287	0/0:30,0:30:90.31:0,90,4919	0/0:21,0:21:63.22:0,63,3446	0/0:49,0:49:99:0,148,8398	0/0:27,0:27:81.28:0,81,4567	0/0:13,0:13:39.13:0,39,1975	0/0:14,0:14:42.14:0,42,2344	0/0:26,0:26:78.24:0,78,4355	0/0:19,0:19:57.20:0,57,3294	0/0:12,0:12:33.11:0,33,1935	0/0:34,0:34:99:0,102,5860	0/0:12,0:12:36.12:0,36,2133	0/0:31,0:31:93.32:0,93,5299	0/0:19,0:18:57.20:0,57,2960	0/0:4,0:4:12.04:0,12,710
chr10	92965943	.	CTCTT	C	26079.90	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=12.822;DP=716;FS=18.373;HRun=0;HaplotypeScore=153.7012;InbreedingCoeff=0.9926;MQ=79.56;MQ0=0;MQRankSum=-9.737;QD=47.33;ReadPosRankSum=5.535;VQSLOD=4.2717;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,44:51:99:2105,111,0	0/0:15,0:15:39.12:0,39,997	0/0:23,0:23:60.02:0,60,1488	0/0:25,0:26:30.11:0,30,1444	1/1:0,16:16:39.13:733,39,0	1/1:1,15:16:42.14:790,42,0	1/1:2,21:23:54.19:1025,54,0	1/1:0,24:24:72.25:1344,72,0	1/1:1,26:27:66.23:1252,66,0	1/1:2,19:21:51.17:961,51,0	1/1:0,11:11:30.10:569,30,0	1/1:3,37:40:99:1988,105,0	1/1:0,30:30:84.29:1593,84,0	1/1:3,29:32:84.29:1587,84,0	0/0:50,0:50:99:0,147,3780	1/1:1,26:27:75.26:1409,75,0	0/0:51,0:51:99:0,154,3990	1/1:1,21:22:51.17:968,51,0	1/1:4,15:19:42.14:775,42,0	1/1:0,24:24:66.23:1253,66,0	1/1:2,31:33:62.20:1182,62,0	1/1:1,16:17:51.17:957,51,0	1/1:1,14:15:39.13:727,39,0	1/1:2,24:26:57.19:1082,57,0	1/1:0,18:18:48.16:911,48,0	1/1:1,25:26:75.26:1410,75,0	1/1:0,23:23:66.23:1229,66,0	1/1:6,4:10:12.04:228,12,0
chr10	92966046	.	TCG	T	7703.92	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=16.547;DP=560;FS=5.221;HRun=0;HaplotypeScore=265.4607;InbreedingCoeff=0.9506;MQ=78.28;MQ0=0;MQRankSum=-16.194;QD=18.74;ReadPosRankSum=2.658;VQSLOD=4.1015;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,22:31:66:579,66,0	0/0:16,0:16:48.12:0,48,888	0/0:24,0:24:54:0,54,1153	0/0:21,0:21:48.11:0,48,886	1/1:3,10:13:29.22:243,29,0	1/1:3,12:15:38.62:336,39,0	1/1:5,10:15:31.38:273,31,0	1/1:12,4:16:12.50:122,12,0	1/1:9,11:20:32.97:297,33,0	1/1:8,21:29:59.98:587,60,0	1/1:2,13:15:36:318,36,0	1/1:6,22:28:71.92:637,72,0	1/1:8,17:25:51.02:457,51,0	1/1:5,13:18:39.02:350,39,0	0/0:45,0:45:99:0,135,2550	1/1:3,12:15:36.03:325,36,0	0/0:43,0:43:99:0,129,2490	1/1:6,7:13:21.03:202,21,0	1/1:5,1:6:3.48:32,3,0	1/1:1,11:12:33.02:298,33,0	1/1:9,9:18:28.91:224,29,0	1/1:5,24:29:68.95:599,69,0	1/1:5,9:14:23.51:198,24,0	1/1:6,9:15:20.93:175,21,0	1/1:3,17:20:51.03:459,51,0	1/1:5,13:18:39.55:389,40,0	1/1:4,17:21:53.14:461,53,0	1/1:0,5:5:15.02:141,15,0
chr10	92966050	.	TATGGCAAGAGGTAGC	T	33951.68	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=16.942;DP=450;FS=4.491;HRun=0;HaplotypeScore=278.5584;InbreedingCoeff=0.9474;MQ=87.33;MQ0=0;MQRankSum=-16.537;QD=114.70;ReadPosRankSum=3.664;VQSLOD=4.5288;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:66.22:2552,66,0	0/0:17,0:17:51.14:0,51,3666	0/0:26,0:26:65.31:0,65,3861	0/0:21,0:21:48.16:0,48,2690	1/1:0,10:10:30.10:1172,30,0	1/1:1,12:13:39.13:1531,39,0	1/1:0,10:10:30.10:1209,30,0	1/1:0,4:4:12.04:496,12,0	1/1:1,11:12:33.58:1331,34,0	1/1:1,19:20:57.19:2272,57,0	1/1:0,13:13:36.12:1443,36,0	1/1:1,22:23:69.24:2701,69,0	1/1:0,17:17:51.18:2054,51,0	1/1:0,13:13:39.13:1570,39,0	0/0:46,0:46:99:0,138,10157	1/1:0,12:12:36.12:1452,36,0	0/0:44,0:44:99:0,132,9532	1/1:0,7:7:21.07:859,21,0	1/1:0,1:1:3.01:125,3,0	1/1:0,11:11:33.11:1330,33,0	1/1:2,9:11:30.10:1074,30,0	1/1:0,24:24:69.24:2706,69,0	1/1:0,9:9:24.08:942,24,0	1/1:1,9:10:21.07:758,21,0	1/1:0,17:17:51.18:2055,51,0	1/1:0,13:13:39.13:1608,39,0	1/1:2,16:19:54.19:2099,54,0	1/1:0,5:5:15.05:611,15,0
chr10	92966200	.	CCAGA	C	4316.60	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.427;DP=599;FS=23.417;HRun=0;HaplotypeScore=160.3191;InbreedingCoeff=0.9982;MQ=92.14;MQ0=0;MQRankSum=-12.970;QD=39.60;ReadPosRankSum=2.126;VQSLOD=3.3924;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,123,3419	0/0:13,0:13:38.98:0,39,959	0/0:31,0:31:90.22:0,90,2207	0/0:27,0:27:78.24:0,78,1900	1/1:0,12:12:33.11:479,33,0	0/0:21,0:21:60.20:0,60,1673	0/0:27,0:27:81.26:0,81,2271	0/0:29,0:29:87.25:0,87,2348	1/1:2,9:11:30.09:424,30,0	1/1:2,9:11:30.05:426,30,0	1/1:0,7:7:21.07:290,21,0	0/0:36,0:36:99:0,99,2688	0/0:32,0:32:96.32:0,96,2673	0/0:19,0:19:57.20:0,57,1645	0/0:37,0:37:99:0,111,3114	1/1:3,10:13:39.11:528,39,0	0/0:29,0:29:87.28:0,87,2408	0/0:30,0:30:90.25:0,90,2507	1/1:0,7:7:21.05:289,21,0	1/1:0,10:10:30.10:445,30,0	1/1:5,12:17:41.32:483,41,0	0/0:24,0:24:72.20:0,72,2012	0/0:12,0:12:36.12:0,36,1041	0/0:47,0:47:99:0,126,3545	0/0:14,0:14:39.13:0,39,1120	1/1:0,10:10:30.10:462,30,0	1/1:0,11:11:33.11:490,33,0	0/0:9,0:9:27.09:0,27,743
chr10	92966206	.	AG	A	740.94	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.151;DP=584;FS=20.607;HRun=1;HaplotypeScore=134.7075;InbreedingCoeff=0.9932;MQ=89.66;MQ0=0;MQRankSum=-13.208;QD=7.80;ReadPosRankSum=3.253;VQSLOD=-0.3710;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,141,2173	0/0:11,0:11:33.09:0,33,502	0/0:24,0:25:68.44:0,68,1025	0/0:27,0:27:72.94:0,73,1138	1/1:1,11:12:27.50:104,28,0	0/0:26,0:26:66.22:0,66,1050	0/0:29,0:29:87.28:0,87,1364	0/0:28,0:28:81.26:0,81,1254	1/1:0,9:9:23.53:93,24,0	1/1:0,9:9:24.24:103,24,0	1/1:0,7:7:16.32:59,16,0	0/0:32,0:32:90.31:0,90,1434	0/0:30,0:30:90.29:0,90,1412	0/0:20,0:20:60.20:0,60,949	0/0:36,0:36:99:0,108,1717	1/1:0,10:10:26.52:108,27,0	0/0:28,0:28:84.29:0,84,1330	0/0:30,0:30:87.25:0,87,1356	1/1:0,5:5:14.12:67,14,0	1/1:0,10:10:25.94:101,26,0	1/1:0,12:12:23.02:88,23,0	0/0:25,0:25:75.22:0,75,1143	0/0:14,0:14:42.14:0,42,666	0/0:46,0:46:99:0,126,2011	0/0:17,0:17:48.14:0,48,732	1/1:0,10:10:27.25:118,27,0	1/1:0,11:11:29.07:120,29,0	0/0:8,0:8:24.08:0,24,384
chr10	92966208	.	ACCAGGTGT	A	6402.15	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.097;DP=582;FS=19.298;HRun=0;HaplotypeScore=197.2981;InbreedingCoeff=0.9960;MQ=91.42;MQ0=0;MQRankSum=-13.534;QD=67.39;ReadPosRankSum=3.072;VQSLOD=3.6656;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,138,6156	0/0:11,0:11:33.11:0,33,1429	0/0:25,0:25:69.24:0,69,2781	0/0:29,0:29:86.73:0,87,3137	1/1:1,11:12:32.54:752,33,0	0/0:26,0:26:78.25:0,78,3019	0/0:29,0:29:84.27:0,84,3675	0/0:28,0:28:81.28:0,81,3442	1/1:0,9:9:27.09:636,27,0	1/1:0,9:9:27.09:636,27,0	1/1:0,7:7:21.07:473,21,0	0/0:31,0:31:90.31:0,90,3849	0/0:29,0:29:87.30:0,87,3878	0/0:21,0:21:60.21:0,60,2450	0/0:36,0:36:99:0,102,4516	1/1:0,10:10:30.10:711,30,0	0/0:29,0:29:87.30:0,87,3758	0/0:28,0:28:84.27:0,84,3594	1/1:0,5:5:15.05:360,15,0	1/1:0,10:10:30.10:702,30,0	1/1:0,12:12:30.02:642,30,0	0/0:25,0:25:72.23:0,72,3068	0/0:14,0:14:42.14:0,42,1813	0/0:45,0:46:99:0,126,5459	0/0:16,0:16:45.15:0,45,1745	1/1:0,10:10:30.10:709,30,0	1/1:0,11:11:33.11:782,33,0	0/0:8,0:8:24.08:0,24,1087
chr10	92966444	.	TAAG	T	21418.42	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=11.441;DP=652;FS=0.363;HRun=0;HaplotypeScore=141.5402;InbreedingCoeff=0.9966;MQ=73.13;MQ0=0;MQRankSum=-4.924;QD=41.35;ReadPosRankSum=2.013;VQSLOD=5.6897;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,2975	0/0:12,0:12:36.12:0,36,794	0/0:11,0:11:29.41:0,29,505	0/0:17,0:17:39.60:0,40,769	1/1:0,28:28:72.24:1120,72,0	1/1:2,22:24:63.21:1011,63,0	1/1:1,18:19:54.18:867,54,0	1/1:4,29:33:87.26:1323,87,0	1/1:0,19:19:48.09:703,48,0	1/1:2,27:29:78.22:1225,78,0	1/1:0,15:15:45.15:713,45,0	1/1:2,32:34:96.33:1541,96,0	1/1:2,28:30:78.23:1226,78,0	1/1:1,14:15:36.12:578,36,0	0/0:23,0:23:66.23:0,66,1457	1/1:0,26:26:66.16:1006,66,0	0/0:25,0:25:69.24:0,69,1524	1/1:3,28:31:78.27:1253,78,0	1/1:1,23:24:69.24:1108,69,0	1/1:1,20:21:54.14:839,54,0	1/1:2,22:24:63.13:956,63,0	1/1:2,27:29:72.25:1157,72,0	1/1:1,24:25:66.23:1060,66,0	1/1:1,18:19:48.16:771,48,0	1/1:0,17:17:39.09:598,39,0	1/1:2,22:24:63.19:964,63,0	1/1:0,27:27:72.25:1157,72,0	1/1:0,5:5:15.05:241,15,0
chr10	92967638	.	C	CAGCA	1617.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.801;DP=824;FS=0.000;HRun=0;HaplotypeScore=253.5066;InbreedingCoeff=0.9972;MQ=83.48;MQ0=0;MQRankSum=-7.016;QD=39.44;ReadPosRankSum=-0.110;VQSLOD=3.3884;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,24:41:60.21:1712,60,0	0/0:18,0:18:54.17:0,54,1094	0/0:21,0:21:53.31:0,53,1067	0/0:32,0:32:96.04:0,96,1768	0/0:10,0:10:30.09:0,30,584	0/0:17,0:17:51.11:0,51,987	0/0:38,0:38:99:0,114,2352	0/0:29,0:29:84.28:0,84,1718	0/0:28,0:28:81.26:0,81,1646	0/0:28,0:28:81.20:0,81,1488	0/0:17,0:17:51.18:0,51,1056	0/0:45,0:45:99:0,132,2723	0/0:47,0:47:99:0,138,2855	0/0:47,0:47:99:0,129,2618	0/0:28,0:28:84.27:0,84,1710	0/0:34,0:34:99:0,99,2064	0/0:36,0:36:99:0,105,2147	0/0:35,0:35:99:0,102,2091	0/0:27,0:27:78.26:0,78,1586	0/0:23,0:23:66.23:0,66,1363	0/0:85,0:85:99:0,244,4872	0/0:18,0:18:51.16:0,51,1030	0/0:13,0:13:33.10:0,33,654	0/0:28,0:28:84.19:0,84,1637	0/0:28,0:28:84.25:0,84,1677	0/0:21,0:21:60.19:0,60,1186	0/0:22,0:22:66.23:0,66,1367	0/0:8,0:8:24.08:0,24,503
chr10	92968099	.	G	GA	13834.55	PASS	AB=0.695;AC=45;AF=0.804;AN=56;BaseQRankSum=-9.644;DP=703;FS=0.854;HRun=10;HaplotypeScore=66.8583;InbreedingCoeff=0.7500;MQ=70.22;MQ0=1;MQRankSum=-2.203;QD=22.39;ReadPosRankSum=0.860;VQSLOD=5.7015;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,47:53:92.65:1191,93,0	0/0:14,0:14:38.92:0,39,316	0/1:17,0:15:0.76:1,0,145	0/0:9,0:8:14.24:0,14,89	1/1:3,22:25:13.87:556,14,0	1/1:0,26:27:72.15:756,72,0	1/1:1,20:21:54.14:576,54,0	1/1:5,22:29:50.42:698,50,0	1/1:2,17:19:39.06:399,39,0	1/1:10,23:33:49.54:712,50,0	1/1:2,12:14:33.04:339,33,0	1/1:2,22:24:54.14:576,54,0	1/1:3,18:21:42.11:447,42,0	1/1:5,17:22:36.07:374,36,0	0/0:20,0:20:50.93:0,51,419	1/1:3,14:17:17.47:391,17,0	0/0:42,0:42:99:0,111,904	0/1:7,27:34:7.21:713,0,7	1/1:10,29:40:40.78:821,41,0	1/1:3,29:33:85.26:869,85,0	1/1:3,19:22:51.13:544,51,0	1/1:1,13:14:32.96:315,33,0	1/1:3,21:24:50.86:543,51,0	1/1:1,31:32:81.20:864,81,0	1/1:1,19:21:44.15:500,44,0	1/1:8,29:37:62.53:854,63,0	1/1:5,14:19:31.37:462,31,0	0/1:2,16:20:4.51:336,0,5
chr10	92970041	.	G	GGGA	27254.68	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-11.829;DP=715;FS=0.352;HRun=0;HaplotypeScore=101.1535;InbreedingCoeff=0.9992;MQ=68.70;MQ0=0;MQRankSum=-5.160;QD=48.41;ReadPosRankSum=2.178;VQSLOD=6.8273;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:87.58:0,88,1219	0/0:12,0:12:36.08:0,36,511	0/0:15,0:14:32.99:0,33,435	0/0:17,0:17:24.92:0,25,489	1/1:2,19:21:48.09:976,48,0	1/1:6,22:28:57.18:1216,57,0	1/1:1,25:27:63.22:1336,63,0	1/1:6,12:18:39.01:633,39,0	1/1:4,24:28:63.21:1319,63,0	1/1:3,26:30:82.95:1594,83,0	1/1:2,10:12:27.09:555,27,0	1/1:2,28:32:81.27:1729,81,0	1/1:0,24:26:69.24:1453,69,0	1/1:4,26:31:75.26:1529,75,0	0/0:33,0:33:87.46:0,87,1523	1/1:2,26:28:72.25:1531,72,0	0/0:41,0:41:99:0,123,1959	1/1:1,25:27:66.22:1409,66,0	1/1:5,13:18:48.13:912,48,0	1/1:1,24:26:63.20:1335,63,0	1/1:6,38:46:89.92:1895,90,0	1/1:5,26:33:69.19:1414,69,0	1/1:0,17:17:45.15:959,45,0	1/1:3,20:24:51.17:1079,51,0	1/1:1,14:17:39.13:832,39,0	1/1:3,26:30:81.08:1437,81,0	1/1:0,32:32:69.21:1471,69,0	1/1:0,11:12:30.10:641,30,0
chr10	92970710	.	TTA	T	9666.85	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=6.121;DP=494;FS=4.298;HRun=0;HaplotypeScore=85.2659;InbreedingCoeff=0.8146;MQ=65.12;MQ0=3;MQRankSum=0.195;QD=22.17;ReadPosRankSum=3.459;VQSLOD=5.1375;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:48.16:668,48,0	0/0:4,0:4:12.04:0,12,217	0/0:12,0:5:13.84:0,14,124	0/0:8,0:4:8.51:0,9,87	1/1:0,27:26:77.72:910,78,0	1/1:0,18:17:36.12:501,36,0	1/1:0,17:17:36.12:493,36,0	1/1:26,0:25:7.83:157,8,0	1/1:0,11:11:30.10:417,30,0	1/1:0,26:26:78.20:1016,78,0	1/1:0,16:16:48.07:636,48,0	0/1:14,0:14:1.71:30,0,2	1/1:15,0:15:19.34:53,19,0	0/1:14,0:14:0.03:25,0,0	0/0:14,0:14:39.12:0,39,661	1/1:0,23:23:57.19:794,57,0	0/0:19,0:19:54.11:0,54,869	1/1:23,2:25:39.64:189,40,0	1/1:1,20:21:60.12:763,60,0	1/1:1,29:30:87.15:1128,87,0	1/1:1,10:11:27.07:357,27,0	1/1:21,0:21:32.09:160,32,0	1/1:14,0:14:10.44:29,10,0	1/1:7,0:7:9.64:28,10,0	1/1:23,0:23:32.71:91,33,0	1/1:0,18:18:51.12:667,51,0	1/1:0,18:18:36.12:496,36,0	1/1:19,0:19:21.80:59,22,0
chr10	92970711	.	TA	T	8583.73	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=7.002;DP=494;FS=5.955;HRun=3;HaplotypeScore=81.0052;InbreedingCoeff=0.9507;MQ=66.33;MQ0=3;MQRankSum=0.501;QD=19.73;ReadPosRankSum=1.372;VQSLOD=4.2699;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:46.79:274,47,0	0/0:4,0:4:12.03:0,12,143	0/0:13,0:6:8.04:0,8,109	0/0:10,0:5:7.65:0,8,42	1/1:27,0:26:75.92:443,76,0	1/1:18,0:17:35.09:206,35,0	1/1:17,0:17:35.04:204,35,0	1/1:0,26:26:77.94:796,78,0	1/1:11,0:11:29.22:170,29,0	1/1:26,0:26:76.32:475,76,0	1/1:16,0:16:46.62:268,47,0	1/1:0,13:13:33.10:404,33,0	1/1:0,15:15:33.09:405,33,0	1/1:1,13:14:27.35:353,27,0	0/0:14,0:14:36.11:0,36,461	1/1:23,0:23:55.57:326,56,0	0/0:18,0:18:51.03:0,51,612	1/1:2,23:25:60:684,60,0	1/1:21,0:21:58.64:364,59,0	1/1:29,0:30:84.39:490,84,0	1/1:11,0:11:26.32:154,26,0	1/1:0,21:21:56.75:573,57,0	1/1:1,13:14:17.87:221,18,0	1/1:0,7:7:15.05:185,15,0	1/1:0,23:23:54.17:667,54,0	1/1:18,0:18:46.76:279,47,0	1/1:18,0:18:34.97:201,35,0	1/1:0,19:19:36.11:443,36,0
chr10	92970820	.	TTTG	T	5620.06	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=11.710;DP=609;FS=9.553;HRun=0;HaplotypeScore=111.9636;InbreedingCoeff=0.1231;MQ=63.58;MQ0=15;MQRankSum=-4.656;QD=11.42;ReadPosRankSum=8.769;VQSLOD=2.7105;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:40:5.83:246,0,6	0/0:12,0:12:33.04:0,33,540	0/0:25,0:10:3.61:0,4,103	0/0:26,0:16:9.12:0,9,262	0/1:22,0:20:12.64:171,0,13	0/1:24,0:22:62.22:64,0,62	0/1:20,0:19:56.07:56,0,88	1/1:5,21:22:27.08:554,27,0	0/1:15,0:15:62.49:63,0,62	0/1:21,0:21:57.88:121,0,58	0/1:20,0:19:5.94:205,0,6	1/1:1,15:16:42.08:489,42,0	1/1:2,7:9:14.88:154,15,0	1/1:5,10:15:31.03:361,31,0	0/0:17,0:16:45.11:0,45,732	1/1:21,0:21:33.61:158,34,0	0/0:37,0:37:96.89:0,97,1486	1/1:8,29:36:49.08:571,49,0	0/1:32,0:30:73.80:202,0,74	0/1:35,0:33:21.59:278,0,22	0/1:13,0:12:55.82:56,0,80	1/1:7,13:20:39.59:469,40,0	1/1:3,12:14:28.48:300,28,0	1/1:3,8:11:12.51:146,13,0	1/1:4,20:23:51.62:601,52,0	0/1:24,0:23:73.24:169,0,73	1/1:20,0:20:12.72:148,13,0	1/1:5,7:12:3.01:38,3,0
chr10	92970823	.	GTTT	G	9963.97	PASS	AB=0.609;AC=45;AF=0.804;AN=56;BaseQRankSum=4.498;DP=607;FS=22.047;HRun=13;HaplotypeScore=97.5071;InbreedingCoeff=0.8076;MQ=61.59;MQ0=16;MQRankSum=-0.585;QD=20.33;ReadPosRankSum=5.497;VQSLOD=1.7877;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,35:40:69.16:838,69,0	0/0:12,0:13:36.09:0,36,607	0/0:24,0:9:10.58:0,11,78	0/0:25,0:15:6.65:0,7,195	1/1:4,17:20:43.45:542,43,0	1/1:6,18:22:24.04:287,24,0	1/1:6,14:19:18.02:219,18,0	1/1:26,0:22:16.71:542,17,0	1/1:4,10:15:20.96:227,21,0	1/1:4,17:21:39.97:505,40,0	1/1:3,18:20:34.83:519,35,0	1/1:17,0:17:42:487,42,0	1/1:10,0:10:14.39:153,14,0	1/1:12,0:12:30.08:359,30,0	0/0:17,0:16:39.13:0,39,692	1/1:0,22:22:36.11:438,36,0	0/0:35,0:37:88.55:0,89,1449	1/1:39,0:38:47.87:559,48,0	1/1:9,22:30:40.86:692,41,0	1/1:5,28:30:80.96:928,81,0	0/1:5,9:13:13.94:191,0,14	1/1:16,0:16:39.06:467,39,0	1/1:14,0:14:23.58:285,24,0	1/1:12,0:12:11.95:145,12,0	1/1:24,0:23:51.08:591,51,0	1/1:5,17:22:17.77:552,18,0	1/1:1,19:20:33.07:401,33,0	1/1:12,0:12:2.93:36,3,0
chr10	92972129	.	T	TAAA	7859.61	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-9.041;DP=643;FS=11.004;HRun=11;HaplotypeScore=176.2092;InbreedingCoeff=0.9509;MQ=68.54;MQ0=0;MQRankSum=-1.607;QD=34.32;ReadPosRankSum=-3.440;VQSLOD=1.7636;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:2.71:0,3,158	0/0:6,0:7:17.65:0,18,174	0/0:21,0:19:32.35:0,32,322	0/0:18,0:18:12.13:0,12,256	0/0:33,0:33:53.67:0,54,346	0/0:18,0:18:35.65:0,36,174	0/0:28,0:28:55.50:0,56,276	1/1:10,16:30:68.61:893,69,0	0/0:13,0:13:23.26:0,23,134	0/0:25,0:25:55.23:0,55,311	0/0:24,0:24:42.83:0,43,222	1/1:3,22:27:66.18:1138,66,0	1/1:9,12:25:66.09:998,66,0	1/1:8,7:18:49.63:749,50,0	0/0:27,0:27:72.17:0,72,837	0/0:8,0:8:19.72:0,20,106	0/0:27,0:27:72.14:0,72,823	1/1:4,23:29:54.16:967,54,0	0/0:30,0:30:52.52:0,53,293	0/0:28,0:28:43:0,43,239	0/0:6,0:6:7.88:0,8,39	1/1:8,16:27:54.11:902,54,0	1/1:4,11:20:47.96:655,48,0	1/1:9,11:21:39.12:685,39,0	1/1:8,13:24:40.34:651,40,0	0/0:30,0:30:59.36:0,59,336	0/0:32,0:33:68.41:0,68,393	1/1:1,5:6:12.04:223,12,0
chr10	92972137	.	AAAAC	A	8999.04	PASS	AB=0.971;AC=25;AF=0.446;AN=56;BaseQRankSum=-4.000;DP=627;FS=11.689;HRun=0;HaplotypeScore=169.6447;InbreedingCoeff=0.9154;MQ=63.82;MQ0=0;MQRankSum=-4.847;QD=30.00;ReadPosRankSum=2.073;VQSLOD=4.4119;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,1:34:33.84:34,0,78	0/0:7,0:7:21.07:0,21,412	0/0:18,0:15:37.95:0,38,739	0/0:17,0:15:23.50:0,23,578	1/1:8,26:34:87.16:1340,87,0	1/1:16,2:18:33.38:247,33,0	1/1:28,2:30:53.54:352,54,0	0/0:36,0:34:99:0,99,1306	1/1:4,9:13:24.08:403,24,0	1/1:1,22:23:69.21:1097,69,0	1/1:2,19:21:54.09:844,54,0	0/0:29,0:29:74.79:0,75,1304	0/0:23,0:23:59.21:0,59,993	0/0:20,0:20:59.71:0,60,829	0/0:26,0:26:75.26:0,75,1746	1/1:0,8:8:21.07:352,21,0	0/0:25,0:25:69.24:0,69,1679	0/0:32,0:32:65.59:0,66,1126	1/1:4,26:30:80.98:1076,81,0	1/1:7,21:28:54.07:818,54,0	1/1:0,7:7:9.03:151,9,0	0/0:25,0:25:56.93:0,57,1004	0/0:20,0:20:42.46:0,42,723	0/0:20,0:20:36.60:0,37,581	0/0:22,0:22:48.13:0,48,815	1/1:2,23:25:72.19:1152,72,0	1/1:5,24:29:69.23:1133,69,0	0/0:7,0:7:14.41:0,14,234
chr10	92972138	.	AAAC	A	6338.56	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=0.591;DP=626;FS=12.117;HRun=0;HaplotypeScore=167.7490;InbreedingCoeff=0.9781;MQ=64.60;MQ0=0;MQRankSum=-3.588;QD=21.27;ReadPosRankSum=1.595;VQSLOD=4.1966;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:33,1:34:42.77:283,43,0	0/0:7,0:7:20.99:0,21,324	0/0:19,0:16:41.14:0,41,669	0/0:17,0:15:22.48:0,22,475	1/1:34,0:34:68.42:743,68,0	1/1:3,15:18:38.85:519,39,0	1/1:6,23:29:59.92:836,60,0	0/0:37,0:35:95.83:0,96,1034	1/1:13,0:13:24.01:217,24,0	1/1:23,0:23:69:613,69,0	1/1:21,0:21:53.95:473,54,0	0/0:29,0:29:42.85:0,43,958	0/0:22,0:22:42.60:0,43,684	0/0:20,0:20:38.34:0,38,611	0/0:27,0:27:78.23:0,78,1485	1/1:8,0:8:21.01:190,21,0	0/0:26,0:26:75.17:0,75,1439	0/0:33,0:33:74.59:0,75,861	1/1:28,1:29:78.47:674,78,0	1/1:28,0:28:53.10:468,53,0	1/1:7,0:7:9:82,9,0	0/0:24,0:24:40.28:0,40,751	0/0:20,0:20:47.62:0,48,561	0/0:19,0:19:8.20:0,8,370	0/0:21,0:21:48.11:0,48,637	1/1:25,0:25:72:642,72,0	1/1:29,0:29:53.78:599,54,0	0/0:7,0:7:14.26:0,14,189
chr10	92972139	.	AAC	A	5322.50	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=0.922;DP=618;FS=8.080;HRun=0;HaplotypeScore=159.4952;InbreedingCoeff=0.9218;MQ=63.89;MQ0=0;MQRankSum=-2.556;QD=17.11;ReadPosRankSum=0.300;VQSLOD=4.6448;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,25:34:68.49:739,68,0	0/0:7,0:7:20.76:0,21,250	0/0:19,0:16:41.09:0,41,560	0/0:16,0:14:24.75:0,25,373	1/1:35,0:35:68.29:618,68,0	1/1:17,1:18:38.88:319,39,0	1/1:28,1:29:59.82:481,60,0	0/0:37,0:35:42.52:0,43,715	1/1:13,0:13:23.81:170,24,0	1/1:23,0:23:68.03:486,68,0	1/1:20,0:20:53.53:379,54,0	0/0:29,0:29:62.50:0,62,679	0/0:22,0:22:17.72:0,18,397	0/0:20,0:20:24.72:0,25,407	0/0:26,0:26:78.24:0,78,1215	1/1:8,0:8:20.83:148,21,0	0/0:25,0:25:75.19:0,75,1158	0/0:33,0:33:69.66:0,70,637	1/1:27,0:27:73.83:542,74,0	1/1:26,0:26:52.17:385,52,0	1/1:7,0:7:8.93:64,9,0	0/0:25,0:25:43.06:0,43,517	0/0:20,0:20:38.40:0,38,359	0/1:18,0:18:9.74:10,0,232	0/0:21,0:21:47.97:0,48,450	1/1:25,0:25:71.46:518,71,0	1/1:28,0:28:51.92:462,52,0	0/0:7,0:7:14.98:0,15,150
chr10	92972140	.	AC	A	4096.93	PASS	AB=0.969;AC=29;AF=0.518;AN=56;BaseQRankSum=4.545;DP=607;FS=5.958;HRun=1;HaplotypeScore=151.4094;InbreedingCoeff=0.7377;MQ=64.24;MQ0=0;MQRankSum=-4.924;QD=11.91;ReadPosRankSum=0.821;VQSLOD=2.2242;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,4:32:71.28:541,71,0	0/0:8,0:8:20.44:0,20,198	0/0:20,0:17:31.14:0,31,418	0/0:15,0:13:24.42:0,24,281	1/1:34,0:34:66.63:480,67,0	1/1:18,0:18:38.11:227,38,0	1/1:26,0:26:58.65:349,59,0	0/0:36,0:34:0.09:0,0,495	1/1:11,0:11:23:123,23,0	1/1:23,0:23:64.14:365,64,0	1/1:19,0:19:52.03:286,52,0	0/0:30,0:30:32.18:0,32,366	0/1:22,1:23:46.21:46,0,184	0/1:21,0:21:12.44:12,0,231	0/0:26,0:26:78.22:0,78,951	1/1:8,0:8:20.13:107,20,0	0/0:25,0:25:75.18:0,75,905	0/0:33,0:33:69:0,69,404	1/1:27,0:27:68.03:448,68,0	1/1:25,0:25:52.20:298,52,0	1/1:7,0:7:8.65:46,9,0	0/0:21,0:23:39.26:0,39,275	0/0:19,0:19:13.96:0,14,166	0/1:17,1:18:51.51:52,0,110	0/0:21,0:21:48.21:0,48,282	1/1:24,0:24:69.32:387,69,0	1/1:28,0:28:49.21:330,49,0	0/0:7,0:7:14.41:0,14,92
chr10	92972426	.	ACAC	A	12686.20	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=16.021;DP=704;FS=3.752;HRun=0;HaplotypeScore=175.6139;InbreedingCoeff=0.9997;MQ=78.33;MQ0=0;MQRankSum=-10.989;QD=39.40;ReadPosRankSum=-0.242;VQSLOD=5.3689;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:75.12:1117,75,0	0/0:9,0:9:27.09:0,27,548	0/0:25,0:25:69.24:0,69,1461	0/0:23,0:23:54.24:0,54,977	1/1:2,22:24:63.06:888,63,0	1/1:2,21:23:60.15:939,60,0	1/1:1,30:31:72.24:1085,72,0	0/0:27,0:27:72.19:0,72,1544	1/1:2,21:23:57.19:949,57,0	1/1:3,9:12:27.09:449,27,0	1/1:0,17:16:42.03:597,42,0	0/0:28,0:28:81.28:0,81,1831	0/0:33,0:33:93.32:0,93,2069	0/0:30,0:30:84.27:0,84,1825	0/0:23,0:23:69.22:0,69,1493	1/1:3,22:25:66.23:1099,66,0	0/0:32,0:32:87.30:0,87,1930	0/0:28,0:28:78.27:0,78,1740	1/1:3,22:25:60.05:890,60,0	1/1:2,20:22:54.18:857,54,0	1/1:1,46:47:99:1800,117,0	0/0:24,0:24:69.24:0,69,1513	0/0:15,0:15:42.14:0,42,938	0/0:37,0:37:99:0,111,2479	0/0:25,0:25:66.23:0,66,1453	1/1:1,24:25:75.26:1229,75,0	1/1:0,17:17:48.02:787,48,0	0/0:23,0:23:60.21:0,60,1359
chr10	92972559	.	GTT	G	2391.06	PASS	AB=0.581;AC=19;AF=0.339;AN=56;BaseQRankSum=1.404;DP=572;FS=6.934;HRun=16;HaplotypeScore=91.0188;InbreedingCoeff=0.9286;MQ=75.20;MQ0=2;MQRankSum=0.525;QD=12.26;ReadPosRankSum=4.466;VQSLOD=2.8079;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:29:45.53:0,46,452	0/0:3,0:5:14.40:0,14,145	0/0:22,0:13:17.98:0,18,171	0/0:28,0:16:9.01:0,9,89	0/0:15,0:18:47.87:0,48,495	0/0:3,0:13:14.98:0,15,143	0/0:7,0:14:24.04:0,24,246	1/1:15,18:33:36.77:387,37,0	0/0:12,0:18:39.04:0,39,432	0/0:16,0:20:45.07:0,45,530	0/0:16,0:19:43.31:0,43,481	1/1:6,11:19:26.47:212,26,0	1/1:2,18:19:41.93:351,42,0	1/1:5,10:16:26.61:212,27,0	0/0:14,0:19:41.67:0,42,466	0/0:26,0:29:75.11:0,75,881	0/0:25,0:26:69.10:0,69,797	1/1:7,7:15:26.21:199,26,0	0/0:12,0:16:39.08:0,39,456	0/0:27,0:29:75.09:0,75,833	0/0:16,0:18:44.49:0,44,535	0/1:5,13:18:3.34:218,0,3	1/1:4,14:19:26.71:267,27,0	1/1:4,8:12:20.88:175,21,0	1/1:4,19:25:41.50:379,41,0	0/0:16,0:23:47.41:0,47,495	0/0:23,0:29:67.84:0,68,723	1/1:8,8:18:20.48:204,20,0
chr10	92973078	.	C	CAAA	10727.72	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-2.540;DP=652;FS=7.830;HRun=3;HaplotypeScore=115.9554;InbreedingCoeff=0.9937;MQ=64.88;MQ0=8;MQRankSum=-11.346;QD=52.85;ReadPosRankSum=-0.545;VQSLOD=3.8312;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:96.32:0,96,1534	0/0:7,0:6:18.06:0,18,288	0/0:18,0:12:21.06:0,21,308	0/0:23,0:20:48.11:0,48,722	0/0:18,0:18:33:0,33,519	0/0:31,0:30:84.27:0,84,1320	0/0:28,0:28:75.25:0,75,1193	1/1:9,17:21:51.17:1050,51,0	0/0:31,0:31:93.27:0,93,1415	0/0:16,0:16:42.13:0,42,653	0/0:15,0:14:30.10:0,30,477	1/1:8,18:26:72.23:1468,72,0	1/1:2,31:33:93.79:2023,94,0	1/1:6,20:25:60.20:1234,60,0	0/0:30,0:30:90.29:0,90,1415	0/0:35,0:35:99:0,99,1584	0/0:27,0:27:72.24:0,72,1148	1/1:2,14:16:45.15:985,45,0	0/0:19,0:18:50.76:0,51,815	0/0:25,0:25:60.20:0,60,948	0/0:33,0:32:90.30:0,90,1440	1/1:4,10:14:39.12:749,39,0	1/1:7,7:14:30.10:573,30,0	1/1:2,20:22:12.33:1125,12,0	1/1:2,10:12:36.12:731,36,0	0/0:18,0:16:48.16:0,48,747	0/0:37,0:36:99:0,102,1631	1/1:2,11:13:36.12:789,36,0
chr10	92973132	.	TGC	T	7420.14	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=9.305;DP=676;FS=2.360;HRun=0;HaplotypeScore=167.6257;InbreedingCoeff=0.9982;MQ=64.14;MQ0=1;MQRankSum=-14.322;QD=39.47;ReadPosRankSum=-0.784;VQSLOD=5.4380;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,172,3303	0/0:7,0:7:21.07:0,21,426	0/0:12,0:12:36.12:0,36,699	0/0:25,0:22:40.69:0,41,1150	0/0:25,0:25:72.21:0,72,1389	0/0:21,0:21:60.21:0,60,1211	0/0:20,0:20:60.18:0,60,1144	1/1:1,23:23:69.08:1037,69,0	0/0:24,0:24:72.23:0,72,1403	0/0:22,0:22:66.21:0,66,1270	0/0:19,0:19:54.19:0,54,1096	1/1:3,20:23:60.20:964,60,0	1/1:2,26:28:75.21:1182,75,0	1/1:0,15:15:42.14:682,42,0	0/0:33,0:33:96.30:0,96,1848	0/0:21,0:21:63.17:0,63,1160	0/0:38,0:38:99:0,108,2133	1/1:1,10:11:30.07:460,30,0	0/0:22,0:22:63.15:0,63,1159	0/0:31,0:31:90.21:0,90,1738	0/0:57,0:57:99:0,166,3188	1/1:3,19:22:51.17:826,51,0	1/1:1,16:17:45.15:727,45,0	1/1:2,16:18:18.53:293,19,0	1/1:0,15:15:39.13:632,39,0	0/0:26,0:26:78.27:0,78,1542	0/0:26,0:26:78.25:0,78,1531	1/1:1,14:15:39.13:617,39,0
chr10	92973165	.	TTGTG	T	6864.33	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=9.512;DP=754;FS=2.526;HRun=0;HaplotypeScore=211.8911;InbreedingCoeff=0.9991;MQ=69.46;MQ0=0;MQRankSum=-12.254;QD=33.00;ReadPosRankSum=-0.893;VQSLOD=4.7781;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:60:99:0,150,3578	0/0:10,0:10:27.09:0,27,680	0/0:38,0:28:64.27:0,64,1201	0/0:37,0:28:31.37:0,31,783	0/0:28,0:28:72.25:0,72,1732	0/0:21,0:21:44.94:0,45,1043	0/0:22,0:22:60.21:0,60,1507	1/1:15,18:33:54.18:926,54,0	0/0:25,0:25:57.18:0,57,1304	0/0:27,0:27:63.19:0,63,1507	0/0:18,0:18:48.16:0,48,1209	1/1:8,14:22:45.13:704,45,0	1/1:7,13:20:48.16:817,48,0	1/1:6,12:17:47.82:706,48,0	0/0:33,0:33:78.27:0,78,1912	0/0:25,0:26:75.04:0,75,1736	0/0:39,0:42:99:0,111,2519	1/1:2,15:17:39.13:654,39,0	0/0:14,0:16:41.72:0,42,910	0/0:29,0:29:75.26:0,75,1869	0/0:59,0:62:99:0,156,3576	1/1:3,18:21:39.09:605,39,0	1/1:7,18:25:45.14:726,45,0	1/1:6,10:17:21.06:316,21,0	1/1:1,18:19:48.16:792,48,0	0/0:28,0:28:75.26:0,75,1889	0/0:22,0:22:57.16:0,57,1288	1/1:5,11:16:36.12:618,36,0
chr10	92973313	.	G	GA	11622.02	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-2.800;DP=497;FS=2.406;HRun=9;HaplotypeScore=56.6607;InbreedingCoeff=0.8844;MQ=65.98;MQ0=0;MQRankSum=-4.363;QD=26.97;ReadPosRankSum=1.604;VQSLOD=5.3883;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,32:36:93.25:1026,93,0	0/0:3,0:3:6:0,6,52	0/0:7,0:6:14.96:0,15,123	0/0:9,0:9:17.77:0,18,154	1/1:3,17:20:48.13:531,48,0	1/1:1,22:23:66.18:730,66,0	1/1:0,14:14:39.11:431,39,0	1/1:9,33:42:73.14:1005,73,0	1/1:0,9:9:27.07:299,27,0	1/1:6,19:25:64.02:675,64,0	1/1:1,19:20:54.11:584,54,0	1/1:2,9:11:30.04:318,30,0	1/1:3,19:22:45.12:497,45,0	1/1:3,11:14:27.07:294,27,0	0/0:19,0:19:47.99:0,48,417	1/1:0,14:14:36.10:398,36,0	0/0:28,0:28:77.98:0,78,677	1/1:1,16:17:29.92:509,30,0	1/1:4,9:13:4.02:273,4,0	1/1:4,16:20:48.13:531,48,0	1/1:1,13:14:36.10:398,36,0	1/1:4,10:14:8.22:247,8,0	1/1:3,15:18:22.08:472,22,0	1/1:3,19:23:53.98:578,54,0	1/1:1,26:27:78.21:863,78,0	1/1:1,16:17:48.13:531,48,0	1/1:0,14:14:36.10:398,36,0	1/1:3,1:4:3.48:34,3,0
chr10	92973737	.	AG	A	9389.04	PASS	AB=0.756;AC=27;AF=0.482;AN=56;BaseQRankSum=24.751;DP=1106;FS=6.836;HRun=2;HaplotypeScore=177.5561;InbreedingCoeff=-0.9290;MQ=74.34;MQ0=0;MQRankSum=-20.512;QD=8.63;ReadPosRankSum=-0.205;VQSLOD=2.0002;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:44,19:63:99:380,0,1750	0/1:15,11:26:99:316,0,557	0/1:28,8:36:99:210,0,995	0/1:27,10:37:99:262,0,950	0/1:17,11:28:99:238,0,647	0/1:18,6:24:99:167,0,653	0/1:30,10:40:99:200,0,1185	0/1:39,10:49:99:251,0,1463	0/1:17,18:35:99:485,0,663	0/1:31,13:44:99:376,0,1219	0/1:18,9:27:99:249,0,688	0/1:30,15:45:99:447,0,1151	0/1:29,20:49:99:565,0,1076	0/1:19,15:34:99:443,0,713	0/1:36,37:73:99:1144,0,1361	0/1:27,24:51:99:753,0,1036	0/1:26,11:37:99:252,0,1058	0/1:23,13:36:99:256,0,893	0/1:19,20:38:99:556,0,681	0/1:22,3:25:20.51:21,0,864	0/1:43,13:56:99:104,0,1703	0/1:15,5:20:99:116,0,550	0/1:18,8:26:99:235,0,689	0/1:45,8:53:10.75:11,0,1773	0/1:25,13:38:99:390,0,904	0/1:40,16:56:99:421,0,1572	0/1:21,20:41:99:542,0,824	0/0:16,2:18:12.22:0,12,679
chr10	92974866	.	A	ACCTTGGTCGTTTC	83400.74	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-3.104;DP=803;FS=0.364;HRun=0;HaplotypeScore=255.5478;InbreedingCoeff=0.9926;MQ=71.76;MQ0=0;MQRankSum=-16.452;QD=124.48;ReadPosRankSum=-0.916;VQSLOD=4.5309;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,19:47:99:6923,123,0	0/0:13,0:13:39.12:0,39,1140	0/0:24,0:24:57.18:0,57,1591	0/0:22,0:21:63.21:0,63,1995	1/1:11,10:21:36.12:1952,36,0	1/1:8,14:24:63.21:3556,63,0	1/1:21,9:36:81.28:4043,81,0	1/1:31,4:41:99:5242,108,0	1/1:19,17:41:96.33:5391,96,0	1/1:18,9:29:78.27:4218,78,0	1/1:14,6:21:57.19:2424,57,0	1/1:26,13:42:90.31:4845,90,0	1/1:25,12:39:99:5250,99,0	1/1:12,9:26:63.22:3605,63,0	0/0:43,0:43:99:0,123,4409	1/1:19,16:38:99:6263,102,0	0/0:31,0:31:81.26:0,81,2872	1/1:10,7:18:33.11:1674,33,0	1/1:20,8:31:72.25:3583,72,0	1/1:17,10:28:65.92:3246,66,0	1/1:22,9:38:60.20:2797,60,0	1/1:6,10:19:45.15:2046,45,0	1/1:10,3:14:30.10:1155,30,0	1/1:12,7:20:36.12:1326,36,0	1/1:5,10:19:36.12:2142,36,0	1/1:17,17:38:99:6310,108,0	1/1:20,13:34:87.30:4789,87,0	1/1:2,4:6:12.04:620,12,0
chr10	92977045	.	G	GA	16958.48	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-13.280;DP=602;FS=18.617;HRun=6;HaplotypeScore=54.9838;InbreedingCoeff=0.9990;MQ=83.03;MQ0=0;MQRankSum=-4.034;QD=38.28;ReadPosRankSum=3.859;VQSLOD=2.9224;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,53:54:99:2116,147,0	0/0:10,0:10:30.09:0,30,370	0/0:27,0:26:54.01:0,54,722	0/0:19,0:18:34.59:0,35,372	1/1:0,20:20:57.08:772,57,0	0/0:25,0:25:75.24:0,75,929	0/0:22,0:22:57.18:0,57,706	1/1:0,22:22:66.21:933,66,0	1/1:0,22:22:60.20:864,60,0	1/1:1,22:23:66.22:949,66,0	1/1:0,14:15:45.15:638,45,0	1/1:1,19:20:51.17:734,51,0	1/1:2,18:20:45.15:648,45,0	1/1:0,20:20:54.14:777,54,0	0/0:26,0:25:75.24:0,75,929	1/1:0,25:25:66.22:950,66,0	0/0:30,0:30:81.19:0,81,960	1/1:0,21:21:54.18:778,54,0	1/1:0,13:13:39.12:543,39,0	1/1:0,14:14:42.05:551,42,0	1/1:0,18:18:48.16:691,48,0	1/1:0,15:15:45.15:639,45,0	1/1:0,19:19:54.18:772,54,0	1/1:1,20:21:54.18:777,54,0	1/1:1,11:12:30.10:431,30,0	1/1:0,22:22:66.22:944,66,0	1/1:2,28:30:81.26:1148,81,0	1/1:1,16:17:21.07:302,21,0
chr10	92979030	.	T	TTCCTTCCTTCCT	1825.26	PASS	AB=1.000;AC=20;AF=0.400;AN=50;BaseQRankSum=-7.231;DP=462;FS=15.784;HRun=0;HaplotypeScore=217.1742;InbreedingCoeff=0.6262;MQ=53.19;MQ0=8;MQRankSum=-0.489;QD=10.37;ReadPosRankSum=-3.214;VQSLOD=0.8680;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:11.10:0,11,236	0/0:8,0:8:9.03:0,9,251	./.	./.	0/0:26,0:26:17.53:0,18,150	0/0:8,0:8:3.01:0,3,79	./.	1/1:19,0:17:6.07:18,6,0	0/0:25,0:25:8.85:0,9,105	0/0:26,0:25:23.98:0,24,293	0/0:20,0:20:19.25:0,19,243	1/1:9,0:9:2.22:7,2,0	1/1:20,0:20:4.97:83,5,0	1/1:21,6:27:4.26:146,4,0	0/0:12,0:12:24.08:0,24,789	0/0:26,0:25:15.05:0,15,397	0/1:23,0:23:42.94:152,0,43	1/1:17,0:17:16.49:277,16,0	0/0:18,0:16:14.95:0,15,230	0/0:19,0:19:9.02:0,9,154	0/0:9,0:9:12.04:0,12,192	1/1:13,0:13:22.30:410,22,0	1/1:10,0:10:6.02:141,6,0	0/1:19,0:19:21.31:55,0,21	1/1:16,0:16:27.09:636,27,0	0/0:23,0:23:13.55:0,14,204	0/0:27,0:27:18.27:0,18,334	1/1:2,0:2:6.01:77,6,0
chr10	92979032	.	CCTTCCTTCCTTCCTTTCTTT	C	5226.02	PASS	AB=1.000;AC=17;AF=0.315;AN=54;BaseQRankSum=7.325;DP=462;FS=0.921;HRun=0;HaplotypeScore=262.7167;InbreedingCoeff=0.5167;MQ=53.46;MQ0=8;MQRankSum=3.815;QD=23.65;ReadPosRankSum=0.332;VQSLOD=3.4477;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:36.10:0,36,1105	0/0:8,0:8:18.06:0,18,1069	./.	0/0:4,0:2:6.02:0,6,118	1/1:0,26:26:51.17:1291,51,0	0/1:9,0:9:1.76:125,0,2	0/0:5,0:5:3.03:0,3,7	0/0:19,0:17:41.01:0,41,955	0/1:25,0:25:36.94:194,0,37	0/1:27,0:26:99:424,0,299	1/1:21,0:21:24.65:677,25,0	0/0:11,0:11:20.99:0,21,679	0/0:17,0:17:33.84:0,34,1662	0/0:25,0:24:35.21:0,35,1515	0/0:12,0:12:36.12:0,36,2500	0/0:26,0:25:19:0,19,154	0/0:22,0:22:60.10:0,60,2778	0/1:17,0:17:13.59:14,0,1106	1/1:18,0:16:44.80:621,45,0	1/1:19,0:19:33.61:418,34,0	1/1:9,0:9:19.55:268,20,0	0/0:13,0:13:39.13:0,39,1802	0/0:11,0:11:27.81:0,28,1123	0/0:19,0:19:9.95:0,10,762	0/0:17,0:17:38.92:0,39,1882	0/1:23,0:23:39.21:694,0,39	1/1:27,0:27:1.74:501,2,0	0/0:3,0:3:6.02:0,6,290
chr10	92979036	.	CCTTCCTTCCTTTCTTT	C	8611.86	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=7.265;DP=468;FS=1.944;HRun=0;HaplotypeScore=215.5485;InbreedingCoeff=0.6651;MQ=53.85;MQ0=6;MQRankSum=3.244;QD=33.90;ReadPosRankSum=1.697;VQSLOD=4.1355;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:33.08:0,33,595	0/0:7,0:7:18.06:0,18,826	0/0:1,0:1:3.01:0,3,71	0/0:4,0:3:9.03:0,9,173	1/1:26,0:26:51.13:972,51,0	0/1:10,0:10:2.88:96,0,3	0/0:5,0:5:3.03:0,3,7	0/0:19,0:17:30.82:0,31,477	1/1:2,23:25:9.03:421,9,0	0/1:29,0:28:13.19:869,0,13	1/1:2,20:22:48.45:1348,48,0	0/0:10,0:10:17.98:0,18,491	0/0:16,0:16:29.71:0,30,1177	0/0:24,0:23:34.03:0,34,1179	0/0:12,0:12:36.12:0,36,2042	0/1:27,0:26:29.33:189,0,29	0/0:22,0:22:57.02:0,57,2125	0/1:18,0:18:1.72:2,0,731	1/1:3,16:17:48.05:1048,48,0	1/1:0,19:19:45.02:801,45,0	1/1:9,0:9:24.08:495,24,0	0/0:16,0:16:35.82:0,36,1282	0/0:13,0:13:27.86:0,28,792	0/0:18,0:18:9.36:0,9,532	0/0:16,0:16:35.39:0,35,1305	1/1:0,23:23:62.85:1360,63,0	1/1:1,26:27:23.12:1010,23,0	0/0:3,0:3:6.02:0,6,192
chr10	92979040	.	CCTTCCTTTCTTT	C	7780.32	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=7.159;DP=471;FS=0.000;HRun=0;HaplotypeScore=189.6423;InbreedingCoeff=0.8486;MQ=54.27;MQ0=5;MQRankSum=3.832;QD=33.25;ReadPosRankSum=1.879;VQSLOD=4.3299;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:11.72:0,12,193	0/0:7,0:7:18.06:0,18,561	0/0:1,0:1:3.01:0,3,71	0/0:5,0:4:12.04:0,12,239	1/1:26,0:26:48.55:792,49,0	0/1:13,0:13:4.67:67,0,5	0/0:5,0:5:3.03:0,3,7	0/0:20,0:19:26.30:0,26,169	1/1:23,0:23:9.03:282,9,0	1/1:1,29:29:84.19:1617,84,0	1/1:21,0:21:48.40:939,48,0	0/0:10,0:10:17.02:0,17,354	0/0:16,0:16:21.94:0,22,764	0/0:25,0:24:32.53:0,33,846	0/0:13,0:13:39.13:0,39,1632	1/1:1,24:24:15.05:562,15,0	0/0:22,0:22:56.97:0,57,1714	0/0:18,0:18:8.31:0,8,419	1/1:19,0:17:48.08:780,48,0	1/1:19,0:19:42.05:642,42,0	1/1:9,0:9:24.08:402,24,0	0/0:18,0:18:34.22:0,34,790	0/0:12,0:12:24.84:0,25,517	0/0:16,0:16:18.27:0,18,351	0/0:17,0:17:34.86:0,35,848	1/1:23,0:23:50.86:1013,51,0	1/1:26,0:26:22.65:685,23,0	0/0:3,0:3:6.02:0,6,117
chr10	92979043	.	TCC	T	627.07	PASS	AB=0.966;AC=12;AF=0.214;AN=56;BaseQRankSum=9.986;DP=474;FS=2.468;HRun=2;HaplotypeScore=138.8587;InbreedingCoeff=0.0827;MQ=54.64;MQ0=3;MQRankSum=-7.252;QD=2.88;ReadPosRankSum=4.880;VQSLOD=-0.3565;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:26.24:0,26,325	0/0:7,0:7:1.28:0,1,113	0/0:2,0:2:6.02:0,6,83	0/0:5,0:4:12.04:0,12,167	0/1:26,0:26:53.80:54,0,287	0/0:16,0:16:34.07:0,34,591	0/0:6,0:6:18.06:0,18,250	0/0:19,0:18:54.18:0,54,743	1/1:23,0:23:8.56:43,9,0	0/1:30,0:29:58.67:59,0,389	0/1:21,0:21:99:160,0,282	0/0:10,0:10:24.08:0,24,375	0/0:16,0:16:39.13:0,39,604	0/0:25,0:24:52.42:0,52,819	0/0:13,0:13:39.13:0,39,706	1/1:25,0:24:14.38:76,14,0	0/0:20,0:21:34.11:0,34,820	0/0:16,1:17:11.27:0,11,673	0/1:17,0:17:99:166,0,254	0/1:19,0:19:47.05:47,0,257	0/1:5,3:8:88.63:89,0,184	0/0:20,0:20:58.44:0,58,930	0/0:13,0:13:39.13:0,39,584	0/0:17,0:17:24.89:0,25,539	0/0:18,0:18:51.17:0,51,813	0/1:23,0:23:20.21:20,0,386	0/1:26,0:26:18.60:71,0,19	0/0:3,0:3:9.03:0,9,159
chr10	92979044	.	CCTTTCTTT	C	6119.27	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=7.551;DP=478;FS=6.761;HRun=0;HaplotypeScore=168.6668;InbreedingCoeff=0.8316;MQ=54.63;MQ0=3;MQRankSum=2.277;QD=23.27;ReadPosRankSum=2.289;VQSLOD=4.0298;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,23:28:4.81:175,5,0	0/0:7,0:7:18.06:0,18,409	0/0:3,0:3:9.03:0,9,204	0/0:5,0:4:12.04:0,12,239	1/1:26,0:26:43.38:637,43,0	0/1:16,0:16:7.74:38,0,8	0/0:6,0:6:4.27:0,4,10	0/0:20,0:19:8.41:0,8,30	1/1:23,0:23:9.03:198,9,0	1/1:30,0:29:75.04:1128,75,0	1/1:21,0:21:44.58:696,45,0	0/0:10,0:10:16.94:0,17,243	0/0:16,0:16:12.70:0,13,424	0/0:25,0:24:26.36:0,26,521	0/0:14,0:14:42.14:0,42,1153	1/1:25,0:24:15.05:331,15,0	0/0:19,0:20:55.07:0,55,1313	0/0:18,0:18:19.49:0,19,186	1/1:17,0:17:47.76:639,48,0	1/1:19,0:19:42.05:558,42,0	1/1:9,0:9:16.71:356,17,0	0/0:20,0:20:27.03:0,27,364	0/0:13,0:13:16.91:0,17,244	0/0:17,0:17:15.22:0,15,185	0/0:18,0:18:31.19:0,31,447	1/1:23,0:23:50.71:873,51,0	1/1:26,0:26:23.25:490,23,0	0/0:3,0:3:2.99:0,3,23
chr10	92979063	.	C	CT	820.32	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.736;DP=521;FS=1.546;HRun=7;HaplotypeScore=134.2717;InbreedingCoeff=0.8744;MQ=67.88;MQ0=1;MQRankSum=-3.481;QD=27.34;ReadPosRankSum=1.059;VQSLOD=1.9492;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:4.15:0,4,79	0/0:11,0:11:33.04:0,33,314	0/0:14,0:13:21.62:0,22,230	0/0:14,0:13:12.18:0,12,186	0/0:25,0:25:48.06:0,48,457	1/1:0,19:19:48.15:579,48,0	1/1:0,11:11:30.09:362,30,0	0/0:19,0:18:27.03:0,27,261	0/0:21,0:21:15.02:0,15,144	0/0:28,0:28:71.33:0,71,673	0/0:22,0:22:57.09:0,57,549	0/0:15,0:15:42.03:0,42,397	0/0:19,0:19:42:0,42,396	0/0:22,0:21:57.04:0,57,540	0/0:14,0:14:33.05:0,33,319	0/0:26,0:26:27.04:0,27,260	0/0:20,0:20:54.08:0,54,521	0/0:21,0:21:47.86:0,48,462	0/0:22,0:22:47.78:0,48,438	0/0:20,0:20:51.08:0,51,492	0/0:8,0:8:15.02:0,15,145	0/0:18,0:18:51.08:0,51,492	0/0:18,0:18:54.09:0,54,521	0/0:15,0:15:38.97:0,39,366	0/0:16,0:16:30.02:0,30,284	0/0:23,0:23:62.93:0,63,608	0/0:29,0:29:38.89:0,39,376	0/0:3,0:3:9.01:0,9,87
chr10	92979740	.	AC	A	2176.83	PASS	AB=0.960;AC=21;AF=0.375;AN=56;BaseQRankSum=10.911;DP=787;FS=6.112;HRun=2;HaplotypeScore=133.5522;InbreedingCoeff=0.6751;MQ=51.60;MQ0=32;MQRankSum=-8.864;QD=6.37;ReadPosRankSum=0.232;VQSLOD=0.5675;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:26,5:28:18.08:101,18,0	0/0:12,0:12:29.65:0,30,447	0/0:35,0:17:45.11:0,45,553	0/0:36,0:13:33.57:0,34,417	1/1:13,2:15:8.47:47,8,0	0/1:27,0:25:9.24:9,0,358	0/1:44,0:39:46.69:47,0,656	0/0:34,0:34:99:0,101,1301	1/1:21,2:22:18.66:140,19,0	1/1:32,1:31:17.68:512,18,0	1/1:11,1:12:3.01:38,3,0	0/0:38,0:38:74.76:0,75,1273	0/0:25,0:25:74.25:0,74,993	0/0:37,0:36:99:0,104,1312	0/0:43,0:43:99:0,115,1558	1/1:32,0:31:28.86:219,29,0	0/0:37,1:37:97.55:0,98,1417	0/0:26,0:25:73.61:0,74,933	0/1:19,3:21:81.47:250,0,81	0/0:11,2:11:0.33:0,0,1	1/1:30,14:30:2.27:19,2,0	0/0:26,0:26:64.51:0,65,889	0/0:16,0:16:42.12:0,42,580	0/0:35,1:36:54.45:0,54,1222	0/0:22,0:22:57.17:0,57,747	1/1:31,5:35:8:691,8,0	1/1:21,2:22:35.10:302,35,0	0/0:8,0:8:24.08:0,24,342
chr10	92979741	.	C	CA	3077.92	PASS	AB=0.749;AC=21;AF=0.375;AN=56;BaseQRankSum=7.271;DP=783;FS=6.843;HRun=1;HaplotypeScore=130.7714;InbreedingCoeff=0.6723;MQ=52.82;MQ0=31;MQRankSum=-8.635;QD=9.11;ReadPosRankSum=-0.148;VQSLOD=0.8483;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,13:29:19.21:151,19,0	0/0:12,0:12:29.65:0,30,430	0/0:36,0:19:45.11:0,45,555	0/0:36,0:13:33.57:0,34,409	1/1:2,9:15:8.50:70,8,0	0/1:19,8:25:52.58:53,0,338	0/1:21,19:37:99:163,0,610	0/0:34,0:34:99:0,102,1292	1/1:9,12:22:18.66:140,19,0	1/1:7,23:31:16.76:718,17,0	1/1:2,8:12:3.01:38,3,0	0/0:36,0:38:78.05:0,78,1285	0/0:25,0:25:74.25:0,74,962	0/0:36,0:35:99:0,105,1316	0/0:42,0:42:99:0,116,1516	1/1:6,25:31:29.14:316,29,0	0/0:40,0:39:99:0,105,1385	0/0:26,0:25:75.12:0,75,937	0/1:14,5:20:80.16:338,0,80	0/0:8,5:11:0.34:0,0,1	1/1:17,11:28:2.19:20,2,0	0/0:26,0:26:66.02:0,66,872	0/0:16,0:16:42.12:0,42,551	0/0:35,0:35:87.35:0,87,1213	0/0:21,0:22:60.06:0,60,757	1/1:10,16:35:10.16:915,10,0	1/1:2,14:22:35.27:355,35,0	0/0:8,0:8:24.08:0,24,327
chr10	92979754	.	CAAAT	C	2305	PASS	AB=0.982;AC=16;AF=0.286;AN=56;BaseQRankSum=10.774;DP=766;FS=11.122;HRun=0;HaplotypeScore=170.2761;InbreedingCoeff=0.5950;MQ=67.15;MQ0=12;MQRankSum=-5.978;QD=9.11;ReadPosRankSum=1.153;VQSLOD=2.4411;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,1:26:15.10:281,15,0	0/0:11,0:11:33.06:0,33,810	0/0:40,0:25:69.16:0,69,1536	0/0:38,0:23:47.72:0,48,1155	0/1:18,0:18:14.84:93,0,15	0/0:24,0:23:54.18:0,54,1286	0/0:45,0:42:73.08:0,73,2164	0/0:36,0:36:99:0,102,2490	1/1:25,0:24:24.90:346,25,0	1/1:31,0:29:13.95:373,14,0	0/1:12,1:13:8.31:8,0,18	0/0:36,0:36:99:0,105,2593	0/0:25,0:25:72.25:0,72,1888	0/0:33,0:32:93.31:0,93,2422	0/0:43,0:43:99:0,120,2962	0/1:31,0:31:18.54:245,0,19	0/0:40,0:40:99:0,120,2848	0/0:29,0:29:87.29:0,87,2170	1/1:17,1:18:25.47:278,25,0	0/0:7,4:10:3.38:0,3,8	1/1:35,0:29:1.05:100,1,0	0/0:25,0:25:69.24:0,69,1808	0/0:16,0:16:42.14:0,42,1024	0/0:33,0:33:93.29:0,93,2326	0/0:20,0:20:54.19:0,54,1468	1/1:29,1:30:37.24:524,37,0	0/1:25,0:24:23.65:243,0,24	0/0:8,0:8:24.03:0,24,515
chr10	92980466	.	A	AAAAC	24881.81	PASS	AB=0.561;AC=41;AF=0.732;AN=56;BaseQRankSum=-12.397;DP=706;FS=6.390;HRun=0;HaplotypeScore=103.4203;InbreedingCoeff=0.9385;MQ=62.07;MQ0=1;MQRankSum=-3.436;QD=44.99;ReadPosRankSum=0.847;VQSLOD=4.8794;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,14:28:36.12:851,36,0	0/0:12,0:12:33.11:0,33,547	0/0:22,0:20:33.11:0,33,507	0/0:16,0:14:17.60:0,18,222	1/1:11,17:30:54.10:1196,54,0	0/0:23,0:23:63.22:0,63,1042	0/0:18,0:18:15.03:0,15,501	1/1:27,13:41:57.17:1258,57,0	1/1:11,21:34:69.24:1643,69,0	1/1:10,19:30:69.22:1566,69,0	1/1:6,21:27:69.23:1636,69,0	1/1:6,12:18:30.10:738,30,0	1/1:7,10:18:36.12:832,36,0	1/1:2,18:22:57.20:1399,57,0	0/0:28,0:28:72.22:0,72,1144	1/1:11,18:29:57.19:1343,57,0	0/0:34,0:34:78.21:0,78,1263	1/1:9,11:22:15.18:773,15,0	1/1:8,6:15:21.07:502,21,0	1/1:13,14:26:39.13:924,39,0	1/1:4,10:16:27.09:664,27,0	1/1:7,15:23:48.16:1097,48,0	0/1:5,17:23:1.28:1032,0,1	1/1:7,14:22:35.43:883,35,0	1/1:9,21:30:60.21:1436,60,0	1/1:7,23:31:72.22:1665,72,0	1/1:13,32:47:96.33:2303,96,0	1/1:2,17:19:48.16:1141,48,0
chr10	92980914	.	A	AG	15937.38	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-5.288;DP=541;FS=1.329;HRun=2;HaplotypeScore=70.1401;InbreedingCoeff=0.9973;MQ=77.28;MQ0=0;MQRankSum=-5.717;QD=38.04;ReadPosRankSum=3.404;VQSLOD=5.4915;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:90.30:1295,90,0	0/0:6,0:6:18.06:0,18,223	0/0:17,0:17:48.12:0,48,580	0/0:13,0:12:29.97:0,30,372	1/1:3,8:11:21.07:302,21,0	0/0:21,0:21:60.18:0,60,731	0/0:21,0:21:51.14:0,51,620	1/1:0,29:29:87.29:1253,87,0	1/1:1,25:26:69.15:947,69,0	1/1:1,15:16:48.16:690,48,0	1/1:1,12:13:30.10:431,30,0	1/1:0,17:17:51.13:710,51,0	1/1:3,19:22:63.21:905,63,0	1/1:3,24:27:66.22:950,66,0	0/0:17,0:17:48.15:0,48,594	1/1:0,31:31:90.27:1273,90,0	0/0:27,0:27:81.23:0,81,990	1/1:3,12:15:36.10:498,36,0	1/1:1,16:17:48.15:669,48,0	1/1:3,17:20:45.15:647,45,0	1/1:1,30:31:84.28:1209,84,0	1/1:0,13:13:33.11:475,33,0	1/1:2,12:14:33.07:449,33,0	1/1:1,17:18:48.16:690,48,0	1/1:2,15:16:30.10:432,30,0	1/1:0,19:19:57.19:820,57,0	1/1:1,19:20:57.19:815,57,0	1/1:0,11:11:33.11:475,33,0
chr10	92980978	.	C	CTGTCTCTG	8623.22	PASS	AB=0.868;AC=27;AF=0.482;AN=56;BaseQRankSum=3.426;DP=513;FS=0.998;HRun=0;HaplotypeScore=207.5384;InbreedingCoeff=-0.2336;MQ=63.52;MQ0=1;MQRankSum=-6.182;QD=20.63;ReadPosRankSum=4.249;VQSLOD=4.2667;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,3:17:14.10:451,14,0	0/0:3,0:3:9.03:0,9,263	0/0:29,0:20:48.88:0,49,722	0/1:38,0:28:13.75:14,0,578	0/1:23,3:27:77.26:338,0,77	0/0:13,0:13:5.90:0,6,41	0/0:14,0:14:16.78:0,17,131	0/1:52,0:52:99:757,0,636	0/1:8,2:10:25.54:356,0,26	0/1:19,0:17:76.47:76,0,367	0/1:15,3:17:64.13:324,0,64	1/1:10,4:14:14.97:469,15,0	0/1:11,2:14:34.41:330,0,34	0/1:18,3:21:99:539,0,104	0/0:16,0:16:48.16:0,48,1326	0/1:13,6:19:0.92:698,0,1	0/0:20,0:20:60.18:0,60,1571	0/1:9,0:9:22.95:23,0,83	0/1:8,4:11:99:535,0,100	0/1:23,8:31:99:1045,0,166	1/1:6,0:6:2.05:22,2,0	1/1:9,4:13:2.10:334,2,0	0/1:11,5:16:2.95:572,0,3	1/1:9,0:9:2.99:23,3,0	0/1:23,3:25:99:250,0,167	0/1:16,5:21:99:747,0,219	0/1:12,3:15:1.57:527,0,2	0/1:9,1:10:90.61:194,0,91
chr10	92980987	.	T	TCTCTCTCA	13921.28	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=9.580;DP=495;FS=11.141;HRun=0;HaplotypeScore=228.2523;InbreedingCoeff=0.6159;MQ=62.77;MQ0=1;MQRankSum=-7.208;QD=32.60;ReadPosRankSum=1.105;VQSLOD=3.4320;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,3:17:11.29:355,11,0	0/0:3,0:3:9.03:0,9,248	0/0:26,0:18:45.37:0,45,500	0/1:34,0:24:4.41:4,0,478	1/1:26,3:30:42:681,42,0	0/1:14,0:14:30.85:269,0,31	0/1:13,0:13:7.98:160,0,8	1/1:48,0:48:99:1826,128,0	1/1:7,2:9:13.47:320,13,0	1/1:20,0:18:50.75:520,51,0	1/1:16,3:18:24.03:487,24,0	1/1:9,4:13:18.06:558,18,0	1/1:10,2:13:29.99:637,30,0	1/1:13,2:17:36.04:761,36,0	0/0:16,0:16:48.14:0,48,1256	1/1:15,5:21:39.04:911,39,0	0/0:23,0:23:63.13:0,63,1459	1/1:9,0:9:20.83:168,21,0	1/1:6,4:9:23.99:561,24,0	1/1:22,8:30:67.68:1537,68,0	1/1:5,0:5:2.28:113,2,0	1/1:10,3:14:21.04:549,21,0	1/1:13,4:18:33.02:710,33,0	1/1:8,0:8:3.01:113,3,0	1/1:23,3:25:30.03:526,30,0	1/1:17,5:22:62.92:1214,63,0	1/1:9,3:12:24.04:749,24,0	1/1:4,1:5:14.83:191,15,0
chr10	92981037	.	T	TA	9380.80	PASS	AC=40;AF=0.741;AN=54;BaseQRankSum=5.649;DP=379;FS=0.532;HRun=6;HaplotypeScore=90.6990;InbreedingCoeff=0.9594;MQ=60.53;MQ0=0;MQRankSum=-8.121;QD=31.69;ReadPosRankSum=1.089;VQSLOD=4.7876;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,5:8:21.05:249,21,0	0/0:8,0:8:24.05:0,24,245	0/0:17,0:10:27:0,27,261	0/0:10,0:8:16.27:0,16,153	1/1:4,28:32:87.26:1065,87,0	0/0:11,0:11:30.07:0,30,306	0/0:6,0:6:9.02:0,9,92	1/1:6,20:26:60.17:730,60,0	1/1:0,10:10:30.10:377,30,0	1/1:4,21:25:63.20:792,63,0	1/1:3,18:21:51.16:632,51,0	1/1:2,4:6:12.04:147,12,0	1/1:3,10:13:36.03:417,36,0	1/1:1,9:10:24.08:302,24,0	0/0:10,0:10:27.06:0,27,275	1/1:1,9:10:27.09:336,27,0	0/0:21,0:21:57.13:0,57,582	1/1:0,7:7:15.05:189,15,0	1/1:3,3:6:12:134,12,0	1/1:2,24:26:75.24:941,75,0	./.	1/1:0,11:11:30.09:372,30,0	1/1:1,14:15:39.12:490,39,0	1/1:1,4:5:9.03:113,9,0	1/1:4,21:24:57.18:709,57,0	1/1:3,18:21:57.18:708,57,0	1/1:1,8:9:24.08:302,24,0	1/1:0,10:10:30.10:377,30,0
chr10	92981078	.	C	CT	7505.67	PASS	AB=0.600;AC=45;AF=0.804;AN=56;BaseQRankSum=6.673;DP=341;FS=14.244;HRun=8;HaplotypeScore=77.2477;InbreedingCoeff=0.7819;MQ=60.52;MQ0=0;MQRankSum=-6.926;QD=27.10;ReadPosRankSum=0.820;VQSLOD=4.1677;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,4:7:12.04:138,12,0	0/0:8,0:8:24.01:0,24,220	0/0:20,0:17:35.97:0,36,315	0/0:7,0:6:8.87:0,9,69	1/1:2,24:26:69.20:796,69,0	1/1:3,9:13:29.96:326,30,0	1/1:0,7:7:18.05:208,18,0	1/1:4,21:25:66.15:746,66,0	1/1:3,7:10:23.98:242,24,0	1/1:2,16:18:48.14:554,48,0	1/1:4,13:17:42.12:476,42,0	1/1:0,5:5:8.96:87,9,0	0/1:2,4:6:12.38:122,0,12	1/1:1,5:6:12.04:138,12,0	0/0:10,0:10:30.01:0,30,271	1/1:4,2:6:6.02:69,6,0	0/0:19,0:19:41.99:0,42,378	1/1:1,3:4:9.03:104,9,0	1/1:2,8:11:21.04:230,21,0	1/1:4,14:18:45.13:517,45,0	1/1:0,1:1:3.01:35,3,0	1/1:4,9:13:30.08:336,30,0	1/1:6,12:18:36.58:416,37,0	1/1:0,4:4:12.03:137,12,0	1/1:3,11:13:39.02:408,39,0	1/1:4,16:20:54.16:621,54,0	1/1:5,10:14:32.58:351,33,0	1/1:0,13:13:39.12:450,39,0
chr10	92981107	.	TCATA	T	2687.74	PASS	AB=1.000;AC=27;AF=0.500;AN=54;BaseQRankSum=3.269;DP=353;FS=34.636;HRun=0;HaplotypeScore=106.0869;InbreedingCoeff=0.2262;MQ=49.93;MQ0=10;MQRankSum=-2.388;QD=11.25;ReadPosRankSum=3.269;VQSLOD=1.5700;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:8:35.94:36,0,38	0/0:9,0:9:18.46:0,18,187	0/0:28,0:17:48.03:0,48,458	0/0:9,0:3:9.03:0,9,103	0/1:25,0:24:47.08:199,0,47	0/0:13,0:13:14.98:0,15,191	0/0:8,0:7:11.77:0,12,95	1/1:23,0:20:56.63:437,57,0	0/1:10,0:10:21.97:22,0,43	0/1:22,0:22:99:217,0,138	0/1:14,0:14:34.20:102,0,34	1/1:7,2:9:17.68:177,18,0	1/1:3,2:5:8.62:116,9,0	1/1:6,2:8:12.01:158,12,0	0/0:11,0:11:29.99:0,30,405	0/1:7,0:7:11.49:11,0,73	0/0:15,0:14:21.62:0,22,302	1/1:2,0:2:5.98:47,6,0	0/1:9,0:8:25.32:58,0,25	0/0:14,0:14:0.02:0,0,166	./.	1/1:12,3:15:14.89:113,15,0	1/1:15,3:18:29.64:329,30,0	0/0:4,1:5:0:0,0,0	1/1:12,4:15:21.02:269,21,0	0/1:21,0:20:91.74:251,0,92	0/1:14,0:13:92.39:123,0,92	1/1:9,3:12:23.83:207,24,0
chr10	92981108	.	CAT	C	2515.92	PASS	AB=1.000;AC=36;AF=0.692;AN=52;BaseQRankSum=5.804;DP=353;FS=27.878;HRun=0;HaplotypeScore=96.5047;InbreedingCoeff=0.6943;MQ=49.62;MQ0=10;MQRankSum=-2.363;QD=9.94;ReadPosRankSum=2.652;VQSLOD=1.7444;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,2:9:5.62:48,6,0	0/0:9,0:9:18.44:0,18,149	0/0:27,0:16:48.03:0,48,458	0/0:9,0:3:9.03:0,9,103	1/1:23,3:25:19.68:223,20,0	0/0:13,0:13:14.76:0,15,139	0/0:9,0:8:11.76:0,12,95	1/1:16,7:20:56.63:437,57,0	1/1:10,0:10:0.29:26,0,0	1/1:19,2:21:8.95:241,9,0	1/1:12,2:14:9.42:115,9,0	1/1:10,0:9:17.96:145,18,0	1/1:5,0:5:8.56:52,9,0	1/1:7,1:8:11.97:95,12,0	0/0:11,0:11:29.96:0,30,308	0/1:7,0:7:7.54:17,0,8	0/0:15,0:14:21.62:0,22,224	1/1:1,1:2:5.98:47,6,0	1/1:8,0:7:10.84:88,11,0	0/1:14,0:14:12.96:15,0,13	./.	1/1:14,1:15:14.89:113,15,0	1/1:16,1:18:29.34:242,29,0	./.	1/1:15,0:15:20.97:174,21,0	1/1:18,3:20:24.57:283,25,0	1/1:11,3:13:10.92:165,11,0	1/1:12,0:12:23.82:176,24,0
chr10	92981110	.	T	TACAC	451.88	PASS	AB=1.000;AC=22;AF=0.524;AN=42;BaseQRankSum=-2.884;DP=375;FS=9.513;HRun=0;HaplotypeScore=120.3303;InbreedingCoeff=0.3275;MQ=48.99;MQ0=17;MQRankSum=1.735;QD=2.18;ReadPosRankSum=0.011;VQSLOD=1.7889;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:5.86:37,6,0	./.	./.	./.	1/1:25,0:23:6:58,6,0	1/1:15,0:15:3.30:69,3,0	0/1:14,0:10:0:1,0,0	./.	0/1:11,0:11:5.32:5,0,28	0/1:24,0:23:18.54:39,0,19	1/1:13,0:13:3.01:32,3,0	0/0:9,0:9:2.87:0,3,54	0/0:3,0:3:6.01:0,6,62	0/0:7,0:7:5.99:0,6,49	0/0:11,0:11:6.01:0,6,71	1/1:7,0:7:2.74:12,3,0	1/1:9,11:21:11.78:221,12,0	0/1:3,0:3:0.02:0,0,0	0/1:9,0:8:0:0,0,0	1/1:15,0:15:14.07:83,14,0	./.	./.	0/0:18,0:18:9.47:0,9,81	./.	0/0:17,0:16:9.01:0,9,84	0/1:21,0:20:15.29:15,0,25	1/1:16,0:14:2.68:11,3,0	0/0:12,0:12:2.90:0,3,16
chr10	92981128	.	C	CAT	2647.97	PASS	AB=0.967;AC=29;AF=0.558;AN=52;BaseQRankSum=1.244;DP=404;FS=2.378;HRun=0;HaplotypeScore=102.4584;InbreedingCoeff=0.2538;MQ=40.89;MQ0=38;MQRankSum=3.136;QD=8.98;ReadPosRankSum=1.537;VQSLOD=3.2967;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,3:14:12:152,12,0	0/0:7,0:6:8.86:0,9,72	0/0:16,0:7:17.85:0,18,130	0/0:5,0:1:3.01:0,3,31	1/1:21,1:20:25.37:286,25,0	0/0:17,0:17:9.41:0,9,68	0/0:16,0:9:8.87:0,9,60	0/1:21,0:15:20.58:196,0,21	1/1:9,1:10:2.83:83,3,0	1/1:27,1:25:18.39:354,18,0	1/1:11,0:10:17.98:179,18,0	0/1:12,0:11:22.34:53,0,22	0/1:8,0:8:0.29:0,0,9	0/1:11,0:10:2.87:39,0,3	0/0:11,0:11:23.96:0,24,230	1/1:12,1:12:5.01:136,5,0	0/0:26,0:24:10.11:0,10,103	1/1:5,0:3:5.65:44,6,0	0/1:6,3:6:17.01:17,0,28	1/1:11,5:15:13.06:322,13,0	./.	0/1:24,0:23:7.20:78,0,7	0/1:22,0:22:11.15:156,0,11	./.	0/1:16,0:16:25.34:82,0,25	0/1:20,1:19:16.13:233,0,16	1/1:14,2:14:35.39:264,35,0	1/1:14,0:14:21.52:149,22,0
chr10	92981192	.	AGGG	A	6849.84	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=11.558;DP=306;FS=13.713;HRun=6;HaplotypeScore=85.4639;InbreedingCoeff=0.8621;MQ=36.43;MQ0=7;MQRankSum=-10.695;QD=34.77;ReadPosRankSum=-1.794;VQSLOD=2.0547;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:10:18.05:262,18,0	0/0:4,0:4:12.04:0,12,253	0/0:26,0:17:51.17:0,51,1031	0/0:17,0:14:39.12:0,39,797	1/1:0,5:4:2.99:48,3,0	0/0:10,0:10:24.08:0,24,544	0/0:12,0:12:36.12:0,36,806	1/1:1,19:20:57.16:878,57,0	1/1:2,6:8:12.04:181,12,0	1/1:0,9:9:27.09:424,27,0	1/1:1,7:7:18.06:263,18,0	1/1:2,9:11:24.07:361,24,0	1/1:1,19:20:51.15:763,51,0	1/1:2,17:18:48.16:725,48,0	0/0:10,0:10:30.10:0,30,663	1/1:0,10:10:24.08:383,24,0	0/0:28,1:28:63.20:0,63,1342	1/1:0,1:1:3.01:48,3,0	1/1:2,3:4:9.03:138,9,0	1/1:0,11:11:27.09:421,27,0	1/1:0,3:2:6.02:85,6,0	1/1:2,10:12:21.07:325,21,0	1/1:0,9:9:17.93:249,18,0	1/1:1,3:3:9.03:121,9,0	1/1:0,16:16:39.13:601,39,0	1/1:0,6:5:15.05:239,15,0	1/1:0,6:5:15.05:239,15,0	1/1:1,2:3:6.02:96,6,0
chr10	92981941	.	GACTA	G	19640.03	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=14.878;DP=556;FS=6.366;HRun=0;HaplotypeScore=146.0699;InbreedingCoeff=0.9978;MQ=88.38;MQ0=0;MQRankSum=-14.929;QD=48.26;ReadPosRankSum=3.486;VQSLOD=5.6135;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:60.16:1157,60,0	0/0:10,0:10:27.09:0,27,755	0/0:25,0:25:71.91:0,72,1775	0/0:27,0:27:78.20:0,78,2013	1/1:0,16:16:33.11:658,33,0	0/0:19,0:19:57.18:0,57,1535	0/0:15,0:15:45.15:0,45,1225	1/1:3,24:27:72.23:1400,72,0	1/1:0,15:15:39.13:773,39,0	1/1:0,22:22:60.21:1183,60,0	1/1:1,11:12:23.68:478,24,0	1/1:0,29:29:87.30:1736,87,0	1/1:1,18:20:60.21:1195,60,0	1/1:1,20:21:51.18:1018,51,0	0/0:20,0:20:60.21:0,60,1672	1/1:3,15:18:48.16:958,48,0	0/0:33,0:33:99:0,99,2668	1/1:2,14:17:36.08:674,36,0	1/1:0,11:11:33.11:636,33,0	1/1:0,17:17:39.13:754,39,0	1/1:4,23:27:39.13:754,39,0	1/1:0,25:25:60.21:1197,60,0	1/1:2,14:16:36.12:718,36,0	1/1:1,21:22:42.14:838,42,0	1/1:0,18:18:51.18:1018,51,0	1/1:0,20:20:57.20:1128,57,0	1/1:1,19:20:50.55:1007,51,0	1/1:0,6:6:18.06:359,18,0
chr10	92982106	.	G	GAAGA	29471.36	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-1.145;DP=673;FS=1.775;HRun=0;HaplotypeScore=114.5104;InbreedingCoeff=0.9922;MQ=77.74;MQ0=4;MQRankSum=-11.849;QD=53.01;ReadPosRankSum=2.027;VQSLOD=6.0635;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,39:44:81.23:2097,81,0	0/0:13,0:13:39.12:0,39,696	0/0:24,0:24:54.79:0,55,870	0/0:25,0:24:65.14:0,65,1032	1/1:4,19:23:57.04:1147,57,0	1/1:1,13:14:36.12:958,36,0	1/1:1,17:20:45.15:1175,45,0	1/1:8,25:34:90.22:2058,90,0	1/1:1,14:17:36.12:959,36,0	1/1:3,20:24:60.14:1331,60,0	1/1:4,12:16:39:813,39,0	1/1:5,35:43:90.31:2352,90,0	1/1:2,25:26:50.80:1335,51,0	1/1:3,18:22:36.12:959,36,0	0/0:24,0:24:69.21:0,69,1246	1/1:2,19:21:48.16:1274,48,0	0/0:31,0:31:84.26:0,84,1504	1/1:2,17:19:39.09:979,39,0	1/1:4,16:21:59.92:1197,60,0	1/1:2,27:29:66.10:1533,66,0	1/1:6,38:43:75.08:1738,75,0	1/1:2,15:17:42.01:937,42,0	1/1:2,9:11:26.84:550,27,0	1/1:2,24:26:57:1519,57,0	1/1:1,13:15:27.09:694,27,0	1/1:2,24:27:78.14:1712,78,0	1/1:6,25:31:69.24:1833,69,0	1/1:1,4:7:12.04:320,12,0
chr10	92982109	.	G	GAA	10368.53	PASS	AB=0.980;AC=41;AF=0.732;AN=56;BaseQRankSum=10.754;DP=645;FS=9.184;HRun=2;HaplotypeScore=157.6288;InbreedingCoeff=0.5276;MQ=78.10;MQ0=4;MQRankSum=-9.588;QD=19.64;ReadPosRankSum=7.348;VQSLOD=1.9733;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:39:47.43:746,47,0	0/0:13,0:13:39.12:0,39,575	0/0:24,0:24:60.39:0,60,822	0/0:25,0:24:65.13:0,65,899	1/1:22,0:23:13.93:390,14,0	1/1:14,0:14:15.12:328,15,0	1/1:20,0:20:44.56:419,45,0	1/1:33,0:33:8.61:649,9,0	1/1:19,0:19:14.14:327,14,0	0/1:21,1:22:10.17:494,0,10	0/1:15,0:16:14.44:262,0,14	1/1:38,1:39:56.15:830,56,0	1/1:24,0:23:30.10:474,30,0	0/1:25,0:24:44.56:307,0,45	0/0:25,0:25:75.21:0,75,1097	1/1:18,0:18:48.07:465,48,0	0/0:30,0:30:84.25:0,84,1242	1/1:19,0:19:39.03:373,39,0	0/1:20,0:20:35.44:371,0,35	1/1:25,0:25:57.22:563,57,0	1/1:40,1:40:35.66:614,36,0	1/1:16,1:17:41.96:385,42,0	0/1:13,0:13:30.15:173,0,30	1/1:28,0:26:57.09:558,57,0	1/1:13,0:13:26.26:252,26,0	1/1:27,0:27:11.06:642,11,0	1/1:27,0:26:31.19:630,31,0	1/1:6,0:6:12.02:118,12,0
chr10	92982524	.	CT	C	1820.97	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.810;DP=577;FS=10.213;HRun=11;HaplotypeScore=63.0930;InbreedingCoeff=0.7572;MQ=72.11;MQ0=0;MQRankSum=0.584;QD=17.68;ReadPosRankSum=-0.851;VQSLOD=3.9780;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,2:24:29.49:0,29,519	0/0:10,1:11:5.43:0,5,263	0/0:19,0:15:0.67:0,1,87	0/0:17,0:12:10.66:0,11,73	0/0:27,1:31:59.23:0,59,804	1/1:3,23:27:67.95:548,68,0	1/1:1,24:26:58.97:474,59,0	1/1:7,20:27:61.73:495,62,0	0/0:8,0:8:18.04:0,18,186	0/0:20,0:21:53.96:0,54,551	0/0:25,0:27:68.84:0,69,700	0/0:16,0:17:38.76:0,39,379	0/0:23,1:24:38.49:0,38,593	0/0:14,1:15:14.45:0,14,358	0/0:16,1:17:11.53:0,12,327	0/0:12,1:13:8.43:0,8,289	0/0:21,1:24:35.18:0,35,548	0/0:18,2:20:4.82:0,5,446	0/0:16,0:18:35.08:0,35,384	0/0:19,2:22:1.73:0,2,411	0/0:15,0:15:45.11:0,45,480	0/0:28,0:29:68.33:0,68,755	0/0:22,1:24:37.37:0,37,563	0/0:14,0:14:10.10:0,10,297	0/0:17,1:20:26.11:0,26,439	0/0:22,0:22:45.10:0,45,468	0/0:20,2:22:4.89:0,5,462	1/1:1,22:23:30.95:461,31,0
chr10	92983636	.	GA	G	4150.58	PASS	AB=0.800;AC=24;AF=0.429;AN=56;BaseQRankSum=13.404;DP=560;FS=1.604;HRun=11;HaplotypeScore=98.8406;InbreedingCoeff=0.8529;MQ=70.07;MQ0=0;MQRankSum=-11.775;QD=17.08;ReadPosRankSum=-0.052;VQSLOD=3.8707;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:34:57.08:0,57,303	0/0:12,0:12:33.08:0,33,352	0/1:13,1:14:3.95:4,0,128	0/0:15,0:14:17.97:0,18,163	1/1:4,16:20:41.94:345,42,0	1/1:4,15:19:29.93:246,30,0	1/1:4,9:13:4.29:153,4,0	0/0:25,0:27:65.93:0,66,653	1/1:4,12:17:40.97:323,41,0	1/1:5,21:25:65.91:541,66,0	1/1:6,17:23:50.79:407,51,0	0/0:26,1:27:29.43:0,29,501	0/0:18,0:18:36.08:0,36,378	0/0:23,2:26:35.38:0,35,562	0/0:21,0:21:45.11:0,45,480	1/1:1,13:14:41.93:341,42,0	0/0:31,0:32:36.50:0,37,729	0/0:22,1:22:17.46:0,17,391	1/1:7,8:16:28.99:227,29,0	1/1:5,19:24:65.92:541,66,0	0/1:5,5:10:17.01:84,0,17	0/0:14,0:14:31.30:0,31,312	0/0:17,0:19:47.89:0,48,479	0/0:17,0:17:48.02:0,48,496	0/0:16,0:16:27.65:0,28,430	1/1:2,23:25:45.59:540,46,0	1/1:5,15:22:51.94:399,52,0	0/0:16,0:16:39.10:0,39,416
chr10	92983660	.	TG	T	7681	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=17.153;DP=564;FS=13.885;HRun=1;HaplotypeScore=98.6809;InbreedingCoeff=0.9992;MQ=72.57;MQ0=1;MQRankSum=-10.903;QD=36.58;ReadPosRankSum=0.185;VQSLOD=3.4213;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:69.24:0,69,1100	0/0:8,0:8:24.08:0,24,384	0/0:16,0:16:45.15:0,45,720	0/0:11,0:11:22.63:0,23,333	1/1:0,20:20:54.18:754,54,0	0/0:20,0:20:51.17:0,51,815	0/0:18,0:18:48.16:0,48,766	0/0:27,0:27:81.26:0,81,1269	1/1:0,17:17:48.13:649,48,0	1/1:0,26:25:75.25:1048,75,0	1/1:0,20:20:51.08:668,51,0	0/0:26,0:26:66.22:0,66,1042	0/0:22,0:22:57.16:0,57,864	0/0:24,0:24:63.21:0,63,1007	0/0:17,0:17:39.13:0,39,624	1/1:0,22:22:63.18:857,63,0	0/0:31,0:31:81.24:0,81,1246	0/0:22,0:21:50.72:0,51,806	1/1:0,15:15:45.15:629,45,0	1/1:0,25:24:63.12:836,63,0	1/1:0,17:17:33.07:439,33,0	0/0:15,0:15:42.13:0,42,648	0/0:15,0:15:42.14:0,42,671	0/0:19,0:19:48.16:0,48,767	0/0:17,0:17:51.16:0,51,792	1/1:0,27:26:75.25:1046,75,0	1/1:0,21:21:54.18:754,54,0	0/0:14,0:14:39.13:0,39,616
chr10	92983847	.	TCA	T	52.88	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=3.087;DP=479;FS=1.781;HRun=0;HaplotypeScore=67.1091;InbreedingCoeff=0.9018;MQ=50.08;MQ0=16;MQRankSum=0.472;QD=4.81;ReadPosRankSum=-0.547;VQSLOD=2.5385;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,7:11:10.85:137,11,0	0/0:9,0:8:21:0,21,336	./.	./.	0/0:17,0:15:35.92:0,36,641	0/0:23,0:22:54.19:0,54,1011	0/0:23,0:21:45.15:0,45,841	0/0:34,0:27:69.16:0,69,1214	0/0:17,0:17:39.13:0,39,704	0/0:18,0:18:51.16:0,51,894	0/0:13,0:13:33.10:0,33,585	0/0:24,0:21:45.15:0,45,829	0/0:18,0:16:36.12:0,36,657	0/0:11,0:8:11.87:0,12,225	0/0:20,0:19:45.15:0,45,842	0/0:15,0:13:36.12:0,36,673	0/0:22,0:19:39.13:0,39,728	0/0:21,0:19:24.47:0,24,606	0/0:26,0:20:60.15:0,60,1053	0/0:16,0:15:42.12:0,42,724	0/0:13,0:9:15.05:0,15,279	0/0:18,0:17:45.15:0,45,831	0/0:10,0:9:24.08:0,24,449	0/0:21,0:18:36.12:0,36,674	0/0:22,0:20:51.12:0,51,917	0/0:22,0:21:63.17:0,63,1135	0/0:17,0:15:39.13:0,39,728	0/0:7,0:7:21.07:0,21,386
chr10	92983873	.	T	TA	2538.06	PASS	AB=0.894;AC=25;AF=0.446;AN=56;BaseQRankSum=-6.812;DP=501;FS=6.170;HRun=12;HaplotypeScore=72.2160;InbreedingCoeff=0.3343;MQ=63.12;MQ0=6;MQRankSum=0.125;QD=8.94;ReadPosRankSum=-3.142;VQSLOD=2.0262;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:26.84:0,27,197	0/1:4,1:5:17.24:17,0,54	0/0:10,0:4:3.67:0,4,32	0/1:10,0:6:5.74:6,0,43	0/1:22,0:21:4.88:5,0,132	0/0:21,0:21:44.70:0,45,328	0/0:18,0:18:38.72:0,39,280	1/1:12,17:27:47.02:425,47,0	0/0:21,0:21:22.13:0,22,186	0/0:31,0:31:2.48:0,2,146	0/0:21,0:21:0.86:0,1,111	1/1:4,15:18:24.92:235,25,0	1/1:5,15:18:32.80:321,33,0	1/1:2,7:8:6.01:58,6,0	0/0:15,0:17:28.77:0,29,201	0/0:19,0:19:23.18:0,23,146	0/0:23,0:22:47.60:0,48,341	0/1:10,12:22:16.80:164,0,17	0/1:25,0:22:55.50:85,0,55	0/1:14,0:14:42.09:42,0,58	0/1:7,0:7:0.43:51,0,0	1/1:4,8:12:27.04:263,27,0	1/1:8,8:16:35.97:325,36,0	1/1:2,12:14:24.04:234,24,0	0/1:5,16:22:7.75:256,0,8	0/1:27,0:26:59.39:106,0,59	0/0:19,0:19:15.41:0,15,142	1/1:4,7:11:15.87:136,16,0
chr10	92984444	.	ACT	A	2308.41	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.887;DP=796;FS=1.696;HRun=0;HaplotypeScore=131.5194;InbreedingCoeff=0.9978;MQ=81.28;MQ0=0;MQRankSum=-0.519;QD=36.64;ReadPosRankSum=0.349;VQSLOD=5.0633;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,2415	0/0:12,0:12:36.12:0,36,666	0/0:19,0:19:40.07:0,40,772	0/0:25,0:25:50.38:0,50,747	0/0:25,0:25:72.25:0,72,1334	1/1:1,17:18:42.14:619,42,0	1/1:2,43:45:99:1811,123,0	0/0:33,0:33:93.32:0,93,1722	0/0:24,0:24:72.25:0,72,1348	0/0:31,0:31:90.30:0,90,1664	0/0:21,0:21:63.22:0,63,1173	0/0:37,0:37:99:0,108,2005	0/0:33,0:33:99:0,99,1819	0/0:32,0:32:93.32:0,93,1741	0/0:33,0:32:84.29:0,84,1573	0/0:36,0:36:99:0,105,1954	0/0:39,0:39:99:0,117,2183	0/0:27,0:27:75.26:0,75,1404	0/0:20,0:20:57.20:0,57,1056	0/0:21,0:21:63.22:0,63,1157	0/0:58,0:58:99:0,172,3203	0/0:15,0:15:42.13:0,42,755	0/0:19,0:19:57.20:0,57,1068	0/0:44,0:44:99:0,124,2305	0/0:22,0:22:66.23:0,66,1223	0/0:33,0:33:93.32:0,93,1742	0/0:22,0:22:66.21:0,66,1205	0/0:7,0:7:21.07:0,21,367
chr10	92985350	.	A	AACACACACAC	7352.41	PASS	AB=0.911;AC=33;AF=0.589;AN=56;BaseQRankSum=2.502;DP=543;FS=2.971;HRun=0;HaplotypeScore=192.3164;InbreedingCoeff=0.1389;MQ=56.80;MQ0=5;MQRankSum=-9.313;QD=16.79;ReadPosRankSum=-6.966;VQSLOD=1.6245;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:25:99:114,0,963	0/1:17,0:17:2.24:91,0,2	0/0:20,0:12:24.07:0,24,550	0/0:19,0:10:24.04:0,24,539	0/1:6,6:12:0:0,0,0	0/1:20,0:20:58.26:58,0,533	0/1:27,0:27:5.54:6,0,862	0/0:33,0:32:43.90:0,44,784	1/1:10,11:22:10.69:376,11,0	1/1:11,8:22:42.11:1339,42,0	1/1:13,0:13:8.89:186,9,0	0/1:8,0:8:11.13:11,0,171	0/1:18,0:17:42.74:43,0,398	0/1:22,0:21:99:172,0,304	1/1:25,0:25:7.53:53,8,0	1/1:11,11:20:21.07:914,21,0	0/0:26,0:26:60.20:0,60,1686	0/1:5,0:14:31.14:53,0,31	1/1:15,5:20:32.98:1147,33,0	1/1:19,0:19:14.76:408,15,0	1/1:9,9:17:1.55:4,2,0	0/1:5,0:15:4.63:19,0,5	0/1:14,0:14:2.86:3,0,257	0/1:28,0:28:99:152,0,443	0/1:14,0:14:55.46:55,0,313	1/1:20,0:19:45.05:1360,45,0	1/1:9,12:23:21.07:787,21,0	0/0:7,0:7:17.98:0,18,267
chr10	92985365	.	A	ACACTCT	7377.28	PASS	AB=0.893;AC=47;AF=0.839;AN=56;BaseQRankSum=2.959;DP=614;FS=28.993;HRun=0;HaplotypeScore=192.2852;InbreedingCoeff=0.4478;MQ=48.36;MQ0=7;MQRankSum=-6.979;QD=13.44;ReadPosRankSum=0.725;VQSLOD=2.1257;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:36:36.85:37,0,271	1/1:1,15:17:15.92:404,16,0	0/0:16,0:9:17.15:0,17,195	0/0:19,0:8:2.22:0,2,161	1/1:12,0:12:2.95:50,3,0	0/1:19,0:19:85.46:85,0,100	0/1:20,0:20:17.94:18,0,167	1/1:38,0:36:46.59:681,47,0	1/1:22,0:23:17.91:241,18,0	1/1:37,0:36:87.79:1170,88,0	1/1:21,0:21:3.01:50,3,0	1/1:18,0:18:35.63:447,36,0	1/1:21,0:20:44.91:440,45,0	1/1:25,0:24:33.75:330,34,0	1/1:0,19:22:8.79:310,9,0	1/1:22,0:20:29.97:491,30,0	0/0:27,0:29:80.92:0,81,1283	1/1:15,0:15:16.57:243,17,0	1/1:20,0:19:26.33:332,26,0	1/1:24,0:22:21.84:187,22,0	1/1:18,0:17:0.94:1,1,0	1/1:19,0:18:7.09:108,7,0	1/1:21,0:21:24.10:220,24,0	1/1:25,0:25:38.72:310,39,0	1/1:19,0:19:26.95:260,27,0	1/1:23,0:21:47.65:446,48,0	1/1:25,0:25:24.46:345,24,0	1/1:8,0:8:20.83:171,21,0
chr10	92985382	.	C	CTCTCTCTCTT	3846.83	PASS	AB=0.977;AC=29;AF=0.518;AN=56;BaseQRankSum=0.413;DP=624;FS=0.000;HRun=0;HaplotypeScore=175.9489;InbreedingCoeff=-0.3499;MQ=48.99;MQ0=11;MQRankSum=-3.140;QD=7.20;ReadPosRankSum=-0.945;VQSLOD=2.5263;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:37:2.06:2,0,494	0/1:15,0:15:55.71:86,0,56	0/0:19,0:8:17.16:0,17,143	0/0:31,0:10:12.79:0,13,67	0/1:12,0:12:59.85:64,0,60	0/1:6,15:24:12.40:314,0,12	1/1:2,21:24:1.25:151,1,0	0/1:42,0:38:88.36:232,0,88	0/1:23,0:23:99:101,0,102	0/1:33,0:31:99:297,0,257	0/1:26,0:26:7.14:7,0,107	1/1:19,0:19:23.59:365,24,0	0/1:18,0:17:61.34:101,0,61	0/1:23,0:22:23.97:161,0,24	0/1:20,0:20:55.37:91,0,55	0/1:20,0:18:6.93:163,0,7	0/0:26,0:24:66.16:0,66,1704	1/1:16,0:16:20.96:273,21,0	0/1:22,0:21:99:135,0,153	0/1:24,0:22:53.59:54,0,126	0/0:14,0:13:5.77:0,6,48	1/1:22,0:21:32.73:324,33,0	1/1:22,0:21:32.85:345,33,0	0/1:20,0:20:48.36:99,0,48	0/1:21,0:21:50.77:201,0,51	0/1:19,0:17:95.10:95,0,138	0/1:25,0:25:81.89:134,0,82	0/1:7,0:5:12.12:50,0,12
chr10	92985984	.	CTAAT	C	4826.64	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=11.931;DP=356;FS=0.000;HRun=0;HaplotypeScore=67.5019;InbreedingCoeff=0.9361;MQ=59.84;MQ0=0;MQRankSum=-8.480;QD=45.53;ReadPosRankSum=-0.622;VQSLOD=4.9578;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.26:0,90,2251	0/0:10,0:10:27.09:0,27,709	0/0:4,0:3:9.03:0,9,173	0/0:4,0:4:6.49:0,6,148	0/0:20,0:20:48.16:0,48,1205	0/0:21,0:21:57.18:0,57,1384	0/0:8,0:8:21.07:0,21,519	1/1:3,27:30:81.26:1440,81,0	0/0:9,0:9:24.08:0,24,630	0/0:17,0:17:51.18:0,51,1338	0/0:14,0:14:30.10:0,30,788	1/1:0,6:6:15.05:275,15,0	1/1:0,12:12:24.08:418,24,0	1/1:0,8:8:21.07:384,21,0	0/0:7,0:7:15.05:0,15,392	0/0:9,0:9:27.09:0,27,708	0/0:22,0:22:63.22:0,63,1651	1/1:0,17:17:45.15:826,45,0	0/0:17,0:17:48.16:0,48,1184	0/0:10,0:10:27.01:0,27,647	0/0:8,0:8:21.07:0,21,518	1/1:0,4:4:9.03:165,9,0	1/1:1,4:5:9.03:165,9,0	1/1:0,2:2:6.02:110,6,0	1/1:0,9:9:24.08:438,24,0	0/0:17,0:17:48.16:0,48,1219	0/0:20,0:20:60.21:0,60,1538	1/1:2,11:13:33.11:606,33,0
chr10	92986380	.	GTCCCCC	G	3474.93	PASS	AB=1.000;AC=34;AF=0.630;AN=54;BaseQRankSum=8.079;DP=441;FS=21.788;HRun=0;HaplotypeScore=109.4790;InbreedingCoeff=0.6694;MQ=76.50;MQ0=1;MQRankSum=-6.788;QD=13.26;ReadPosRankSum=-4.170;VQSLOD=-0.0068;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.22:0,87,2301	0/0:8,0:8:21.04:0,21,541	0/0:18,0:16:33.04:0,33,718	0/0:21,0:20:38.57:0,39,861	1/1:13,0:13:14.08:127,14,0	0/0:20,0:19:51.15:0,51,710	0/0:21,0:21:54.11:0,54,756	1/1:15,3:18:42.50:476,42,0	1/1:23,0:24:35.61:351,36,0	1/1:18,2:20:44.96:474,45,0	1/1:13,2:15:25.20:251,25,0	0/1:15,0:15:3.84:87,0,4	./.	1/1:8,0:8:15.33:128,15,0	0/0:25,0:25:66.21:0,66,1937	1/1:21,2:23:38.78:464,39,0	0/0:28,0:28:75.23:0,75,2183	0/1:13,0:13:44.86:45,0,79	1/1:9,0:9:15.42:129,15,0	1/1:11,3:15:33.05:423,33,0	1/1:14,0:15:3.47:31,3,0	1/1:8,0:9:9.67:69,10,0	0/1:6,0:6:0:1,0,0	1/1:26,0:26:4.80:21,5,0	1/1:6,0:6:2.68:11,3,0	1/1:13,1:14:26.12:258,26,0	1/1:9,0:9:8.76:89,9,0	0/1:4,0:4:14.84:42,0,15
chr10	92986382	.	CCCCCT	C	5526.84	PASS	AB=0.773;AC=36;AF=0.667;AN=54;BaseQRankSum=4.276;DP=429;FS=10.132;HRun=0;HaplotypeScore=92.1301;InbreedingCoeff=0.8277;MQ=76.88;MQ0=1;MQRankSum=-7.255;QD=21.85;ReadPosRankSum=-4.683;VQSLOD=2.5540;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.16:0,87,1964	0/0:8,0:8:21.05:0,21,466	0/0:18,0:16:39.52:0,40,717	0/0:21,0:20:42.05:0,42,841	1/1:5,5:10:17.93:209,18,0	0/0:20,0:19:51.07:0,51,505	0/0:21,0:21:54.02:0,54,552	1/1:7,11:18:45.03:568,45,0	1/1:2,21:23:38.87:754,39,0	1/1:4,15:19:44.91:583,45,0	1/1:8,7:15:27:378,27,0	1/1:14,1:15:26.52:258,27,0	./.	1/1:7,1:8:17.78:180,18,0	0/0:24,0:24:68.95:0,69,1670	1/1:2,20:22:42.09:785,42,0	0/0:28,0:28:75.17:0,75,1854	1/1:13,0:13:23.08:175,23,0	1/1:7,2:9:17.96:217,18,0	1/1:10,3:13:33.07:477,33,0	1/1:3,12:15:3.48:63,3,0	1/1:9,0:9:20.26:148,20,0	0/1:1,5:6:0:0,0,0	1/1:23,2:25:5.17:50,5,0	1/1:7,0:7:3:25,3,0	1/1:3,11:14:30.03:387,30,0	1/1:0,8:8:12:205,12,0	0/1:4,0:4:4.76:64,0,5
chr10	92986383	.	CCCCT	C	4595.88	PASS	AB=1.000;AC=37;AF=0.685;AN=54;BaseQRankSum=5.725;DP=429;FS=7.126;HRun=0;HaplotypeScore=88.3002;InbreedingCoeff=0.8809;MQ=76.96;MQ0=1;MQRankSum=-7.605;QD=18.31;ReadPosRankSum=-4.943;VQSLOD=2.1804;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.14:0,87,1646	0/0:8,0:8:21.03:0,21,386	0/0:18,0:16:39.47:0,39,591	0/0:21,0:20:42.02:0,42,723	1/1:11,0:11:20.94:195,21,0	0/0:20,0:19:49.54:0,50,310	0/0:22,0:22:52.43:0,52,354	1/1:17,1:18:45.03:488,45,0	1/1:22,1:23:38.71:475,39,0	1/1:19,0:19:44.97:456,45,0	1/1:15,0:15:27:279,27,0	1/1:14,1:15:29.95:260,30,0	./.	1/1:7,1:8:17.93:157,18,0	0/0:24,0:24:68.85:0,69,1390	1/1:22,0:22:42.08:519,42,0	0/0:28,0:28:75.17:0,75,1550	1/1:12,1:13:38.88:313,39,0	1/1:8,0:8:17.96:171,18,0	1/1:12,1:13:33.06:367,33,0	1/1:14,0:14:3.48:40,3,0	1/1:8,1:9:20.69:208,21,0	0/1:6,0:6:0.11:0,0,0	1/1:2,23:25:5.36:111,5,0	1/1:0,7:7:3.01:56,3,0	1/1:13,0:13:29.76:289,30,0	1/1:8,0:8:12:136,12,0	1/1:4,0:4:9.88:78,10,0
chr10	92986386	.	CT	C	3073.46	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=6.801;DP=415;FS=12.268;HRun=1;HaplotypeScore=73.0391;InbreedingCoeff=0.8615;MQ=76.28;MQ0=1;MQRankSum=-6.645;QD=12.65;ReadPosRankSum=-3.681;VQSLOD=0.3434;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:72.58:0,73,823	0/0:8,0:8:24.01:0,24,237	0/0:16,1:15:26.76:0,27,294	0/0:20,1:20:44.96:0,45,476	1/1:8,2:10:20.77:145,21,0	0/0:20,0:19:45.35:0,45,201	0/0:24,0:24:35.23:0,35,200	1/1:15,0:15:44.55:330,45,0	1/1:22,0:22:38.33:270,38,0	1/1:17,0:17:44.70:332,45,0	1/1:16,0:16:26.80:197,27,0	1/1:12,0:12:29.92:242,30,0	0/1:6,0:6:0:0,0,0	1/1:7,0:7:17.91:139,18,0	0/0:23,0:23:65.12:0,65,684	1/1:22,0:22:41.60:288,42,0	0/0:29,0:29:77.31:0,77,823	1/1:13,0:13:38.88:314,39,0	1/1:7,0:7:17.89:136,18,0	1/1:12,0:12:32.79:250,33,0	1/1:13,0:13:2.98:21,3,0	1/1:9,0:9:20.62:155,21,0	0/1:5,0:5:0.01:0,0,0	1/1:25,0:25:5.57:44,6,0	1/1:7,0:7:2.98:22,3,0	1/1:12,0:12:25.49:203,25,0	1/1:9,0:9:11.81:83,12,0	1/1:4,0:4:11.99:101,12,0
chr10	92987751	.	ACC	A	4696.07	PASS	AB=0.873;AC=46;AF=0.821;AN=56;BaseQRankSum=0.653;DP=444;FS=5.537;HRun=2;HaplotypeScore=50.8849;InbreedingCoeff=0.2404;MQ=55.84;MQ0=32;MQRankSum=-1.552;QD=12.17;ReadPosRankSum=-2.848;VQSLOD=0.8382;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:36:7.51:8,0,363	0/1:12,0:12:17.25:17,0,231	0/0:40,0:12:26.29:0,26,233	0/1:38,0:11:37.24:37,0,107	1/1:2,8:10:3.24:233,3,0	1/1:2,18:18:16.60:186,17,0	1/1:2,12:11:9.03:106,9,0	1/1:11,19:29:57.44:712,57,0	1/1:4,0:4:8.94:94,9,0	1/1:6,8:10:26.39:283,26,0	1/1:2,9:10:21.50:220,21,0	1/1:5,2:6:17.97:215,18,0	1/1:2,5:6:6.90:74,7,0	1/1:9,3:12:30.09:370,30,0	0/0:18,0:17:31.17:0,31,337	1/1:3,9:10:2.99:37,3,0	0/1:37,0:37:61.58:62,0,814	1/1:2,6:8:16.38:165,16,0	1/1:7,6:10:2.47:198,2,0	1/1:8,0:8:8.03:108,8,0	0/1:5,4:7:25.06:32,0,25	1/1:2,6:7:12.03:139,12,0	1/1:8,7:15:34.66:421,35,0	0/1:2,10:12:0.30:1,0,0	1/1:4,13:16:15.72:207,16,0	1/1:9,0:7:7.74:81,8,0	1/1:6,0:6:5.33:108,5,0	1/1:10,7:16:45.14:583,45,0
chr10	92988257	.	TAA	T	3230.05	PASS	AB=0.771;AC=24;AF=0.429;AN=56;BaseQRankSum=7.894;DP=460;FS=2.435;HRun=15;HaplotypeScore=70.3500;InbreedingCoeff=0.7580;MQ=74.05;MQ0=2;MQRankSum=3.594;QD=12.87;ReadPosRankSum=5.399;VQSLOD=2.8017;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:49:99:0,126,1521	0/0:7,0:7:15.03:0,15,187	0/0:22,0:19:32.39:0,32,344	0/1:11,1:10:11.04:11,0,79	1/1:8,21:29:50.66:442,51,0	1/1:5,0:23:41.99:179,42,0	1/1:6,0:32:60.79:260,61,0	0/0:11,0:11:24.89:0,25,268	1/1:4,10:14:20.66:185,21,0	1/1:4,21:25:50.71:492,51,0	1/1:5,11:17:9.48:179,9,0	0/0:5,0:5:7.26:0,7,78	0/0:8,0:6:11.93:0,12,113	0/0:12,0:10:3.90:0,4,39	0/0:15,0:15:39.06:0,39,462	1/1:5,11:17:35.60:302,36,0	0/0:26,0:31:77.19:0,77,944	0/0:8,0:8:17.75:0,18,202	1/1:4,12:16:35.82:302,36,0	1/1:4,13:17:32.81:284,33,0	0/1:5,7:13:9.51:135,0,10	0/0:3,0:3:6.02:0,6,71	0/0:7,0:7:13.76:0,14,115	0/0:7,0:7:3.91:0,4,22	0/0:20,0:20:51.03:0,51,567	1/1:7,14:22:41.62:354,42,0	1/1:0,13:13:35.99:317,36,0	0/0:1,0:1:3.01:0,3,31
chr10	92988989	.	C	CGTGTGTGTGT	4197.68	PASS	AB=0.910;AC=26;AF=0.542;AN=48;BaseQRankSum=-3.838;DP=726;FS=0.000;HRun=0;HaplotypeScore=225.2096;InbreedingCoeff=0.4443;MQ=61.30;MQ0=19;MQRankSum=-2.619;QD=9.45;ReadPosRankSum=-0.056;VQSLOD=1.9116;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:43:13.27:13,0,23	0/1:11,0:14:3.68:4,0,179	./.	./.	1/1:20,0:21:18.04:272,18,0	0/0:22,0:21:6.02:0,6,75	./.	0/1:31,0:30:20.82:39,0,21	1/1:20,6:30:6.02:179,6,0	1/1:36,0:35:29.43:608,29,0	1/1:10,0:10:6.02:99,6,0	0/0:30,0:29:28.69:0,29,806	0/1:34,0:33:17.50:17,0,523	0/0:19,0:19:9.03:0,9,163	0/0:29,0:33:39.44:0,39,915	1/1:26,0:26:27.07:485,27,0	0/0:36,0:37:54.08:0,54,1176	0/0:26,0:25:42.05:0,42,720	1/1:19,0:17:24.97:689,25,0	1/1:19,0:18:6.02:91,6,0	1/1:52,0:50:33.02:435,33,0	0/1:22,0:22:8.75:9,0,113	0/0:10,0:10:6.02:0,6,133	0/0:32,0:32:42.60:0,43,786	0/1:28,0:28:16.74:17,0,313	1/1:33,0:31:61.97:962,62,0	1/1:16,0:16:15.90:278,16,0	./.
chr10	92989020	.	GTGTGTGTC	G	331.27	PASS	AB=0.860;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.165;DP=739;FS=9.605;HRun=0;HaplotypeScore=183.1018;InbreedingCoeff=0.3737;MQ=53.38;MQ0=30;MQRankSum=-2.053;QD=2.45;ReadPosRankSum=-4.525;VQSLOD=0.1925;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:65.98:0,66,1045	0/0:15,0:15:36.03:0,36,899	1/1:8,0:3:4.96:14,5,0	0/0:13,0:5:11.71:0,12,73	0/0:23,0:22:29.99:0,30,369	0/1:7,18:23:13.98:58,0,14	1/1:1,30:31:5.89:92,6,0	0/1:41,0:36:86.99:272,0,87	0/0:32,0:29:43.72:0,44,624	0/0:28,0:27:70.16:0,70,803	0/0:11,0:11:14.99:0,15,170	0/1:30,0:29:19.86:20,0,844	0/0:29,0:28:42.03:0,42,560	0/0:23,0:23:15.02:0,15,205	0/0:33,0:32:28.80:0,29,1820	0/0:26,0:24:47.88:0,48,585	0/0:37,0:35:86.89:0,87,1595	0/0:30,0:28:44.22:0,44,616	0/0:22,0:18:36.56:0,37,560	0/0:20,0:19:26.75:0,27,241	0/0:58,0:55:75.59:0,76,900	0/0:18,0:17:11.97:0,12,174	0/0:11,0:11:6.02:0,6,103	0/0:42,0:41:46.69:0,47,658	0/0:27,0:27:27.02:0,27,356	0/0:39,0:37:99:0,105,1256	0/0:17,0:17:36.59:0,37,352	0/0:8,0:7:14.91:0,15,166
chr10	92989024	.	G	GTC	1712.64	PASS	AB=0.977;AC=15;AF=0.268;AN=56;BaseQRankSum=-3.254;DP=727;FS=16.020;HRun=0;HaplotypeScore=125.8877;InbreedingCoeff=-0.3801;MQ=53.83;MQ0=28;MQRankSum=1.859;QD=4.21;ReadPosRankSum=-3.356;VQSLOD=0.9277;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:22.17:0,22,428	0/1:13,0:13:72.05:72,0,131	0/0:12,0:4:4.50:0,4,51	0/0:15,0:6:11.91:0,12,89	0/1:22,0:21:68.31:68,0,92	0/0:22,0:20:5.81:0,6,55	0/0:30,0:30:5.74:0,6,34	0/1:39,0:34:10.24:65,0,10	0/1:32,0:29:30.27:191,0,30	0/1:25,0:24:82.98:182,0,83	0/1:9,0:9:35.71:56,0,36	0/0:29,0:28:34.60:0,35,574	0/1:29,0:28:15.14:15,0,283	0/0:23,0:23:14.92:0,15,114	0/0:34,0:33:31.67:0,32,790	0/1:25,0:23:30.34:190,0,30	0/0:38,0:36:59.55:0,60,988	0/0:28,0:28:17.04:0,17,281	0/1:19,0:17:72.78:95,0,73	0/1:20,0:19:25.48:141,0,25	0/1:56,0:53:81.67:324,0,82	0/1:17,0:16:2.84:3,0,42	0/0:11,0:11:5.96:0,6,55	0/1:41,1:42:22.80:23,0,304	0/0:25,0:25:7:0,7,163	0/1:21,15:37:99:290,0,249	0/1:19,0:19:26.48:149,0,26	0/0:8,0:7:17.33:0,17,122
chr10	92989026	.	GTC	G	3880.12	PASS	AB=0.890;AC=29;AF=0.518;AN=56;BaseQRankSum=1.339;DP=709;FS=4.127;HRun=0;HaplotypeScore=112.2054;InbreedingCoeff=0.0122;MQ=54.78;MQ0=26;MQRankSum=-1.077;QD=7.39;ReadPosRankSum=1.066;VQSLOD=2.8199;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:21.77:0,22,498	0/1:12,1:13:30.55:31,0,252	0/1:13,0:4:6.01:6,0,12	0/0:17,0:8:23.14:0,23,171	0/1:21,1:21:26.51:27,0,97	0/1:22,0:20:16.24:16,0,27	1/1:30,0:30:5.85:34,6,0	1/1:37,0:32:38.24:430,38,0	0/0:30,0:27:42.79:0,43,321	0/1:20,1:20:86.20:86,0,221	0/0:9,0:9:9.33:0,9,73	0/1:16,14:29:37.59:742,0,38	0/1:5,24:28:26.84:364,0,27	1/1:2,20:22:9.03:137,9,0	0/0:32,0:31:54.69:0,55,831	0/1:24,1:23:99:126,0,166	0/0:37,0:35:83.70:0,84,1038	0/1:6,24:29:10.91:445,0,11	0/1:19,0:17:22.88:23,0,215	0/0:17,1:18:1.27:0,1,148	0/1:51,1:49:51.79:52,0,362	1/1:3,15:17:12.02:169,12,0	1/1:1,10:11:6.02:92,6,0	1/1:9,35:43:39.43:578,39,0	1/1:4,19:23:17.61:240,18,0	0/1:38,0:37:99:111,0,394	0/1:18,0:18:68.94:69,0,151	1/1:8,0:7:15.27:102,15,0
chr10	92990350	.	CA	C	4419.76	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-6.841;DP=645;FS=9.142;HRun=9;HaplotypeScore=140.8069;InbreedingCoeff=0.6897;MQ=68.07;MQ0=16;MQRankSum=7.421;QD=14.44;ReadPosRankSum=-3.672;VQSLOD=2.7529;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:77.11:0,77,845	0/0:2,0:2:3.01:0,3,35	0/0:57,0:22:39.06:0,39,363	0/0:63,0:28:24.75:0,25,286	0/1:36,0:36:4.87:5,0,125	1/1:1,19:20:51.03:467,51,0	1/1:2,11:13:30.02:275,30,0	1/1:4,19:24:50.02:441,50,0	0/0:30,0:30:11.04:0,11,140	0/1:19,0:19:0.41:0,0,104	0/0:28,0:28:11:0,11,144	1/1:0,11:11:24.01:220,24,0	1/1:1,16:17:41.82:369,42,0	1/1:1,18:19:42.02:384,42,0	0/0:23,0:23:66.20:0,66,761	0/0:22,0:22:23.89:0,24,144	0/0:18,0:18:47.51:0,48,527	1/1:4,21:25:32.53:460,33,0	0/1:16,0:15:6:24,0,6	0/0:43,0:43:7.66:0,8,233	0/1:5,0:5:0.54:1,0,3	1/1:2,20:22:54.02:493,54,0	1/1:3,15:18:36.02:329,36,0	1/1:0,7:7:21.01:192,21,0	1/1:2,15:17:36.01:330,36,0	0/1:17,0:17:11.28:11,0,73	0/0:24,0:24:4.51:0,5,114	1/1:4,16:20:31.45:420,31,0
chr10	92990354	.	A	AC	3035.82	PASS	AB=0.724;AC=15;AF=0.268;AN=56;BaseQRankSum=10.275;DP=631;FS=18.824;HRun=0;HaplotypeScore=144.3792;InbreedingCoeff=0.5020;MQ=67.25;MQ0=16;MQRankSum=-13.841;QD=12.70;ReadPosRankSum=2.072;VQSLOD=3.2613;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:65.82:0,66,1007	0/0:2,0:2:6.01:0,6,67	0/0:55,0:23:51.70:0,52,517	0/0:55,1:23:16.81:0,17,357	0/1:14,20:34:29.68:378,0,30	0/0:19,0:19:50.01:0,50,313	0/0:12,0:12:29.42:0,29,184	0/0:23,0:23:59:0,59,394	1/1:20,11:31:48.27:464,48,0	0/1:10,9:19:11.99:294,0,12	0/1:16,13:29:48.60:350,0,49	0/0:11,0:11:23.54:0,24,147	0/0:17,0:17:40.92:0,41,250	0/0:20,0:20:47.19:0,47,312	0/0:23,0:23:69.22:0,69,947	1/1:6,14:20:40.89:384,41,0	0/0:18,0:18:36.15:0,36,658	0/0:28,0:28:60.76:0,61,373	0/1:14,2:15:43.43:95,0,43	1/1:18,23:41:48.48:690,48,0	1/1:5,1:6:5.52:43,6,0	0/0:22,0:22:61.91:0,62,402	0/0:19,0:19:47.31:0,47,326	0/0:7,0:7:20.59:0,21,129	0/0:17,0:17:41.31:0,41,277	0/1:12,7:19:49.80:197,0,50	1/1:13,11:24:10.87:322,11,0	0/0:17,0:17:47.07:0,47,294
chr10	92990358	.	A	AC	4214.58	PASS	AB=0.691;AC=16;AF=0.286;AN=56;BaseQRankSum=8.092;DP=629;FS=4.990;HRun=0;HaplotypeScore=139.1827;InbreedingCoeff=0.6338;MQ=67.68;MQ0=15;MQRankSum=-10.322;QD=17.78;ReadPosRankSum=3.386;VQSLOD=6.4761;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:70.73:0,71,1002	0/0:3,0:3:9.01:0,9,94	0/0:50,0:22:53.93:0,54,514	0/0:53,0:23:21.21:0,21,326	1/1:22,13:35:60.17:730,60,0	0/0:20,0:20:48.29:0,48,239	0/0:12,0:12:31.41:0,31,167	0/0:25,0:25:52.41:0,52,288	0/1:15,10:28:31.32:436,0,31	0/1:13,6:20:20.02:330,0,20	1/1:13,11:27:21.66:520,22,0	0/0:11,0:11:22.73:0,23,112	0/0:19,0:19:42.91:0,43,230	0/0:19,0:19:42.77:0,43,224	0/0:23,0:23:69.22:0,69,931	1/1:15,2:19:5.33:276,5,0	0/0:17,0:17:48.15:0,48,651	0/0:26,0:26:54.90:0,55,325	1/1:5,8:14:8.09:290,8,0	1/1:27,9:40:6.11:686,6,0	0/1:1,4:6:7.36:93,0,7	0/0:23,0:23:33.98:0,34,246	0/0:19,0:19:38.38:0,38,246	0/0:7,0:7:19.89:0,20,99	0/0:16,0:16:37.09:0,37,196	0/1:10,12:23:1.42:433,0,1	1/1:11,10:24:10.55:421,11,0	0/0:22,0:22:62.88:0,63,359
chr10	92990359	.	A	AAAACC	12220.51	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=3.601;DP=623;FS=15.854;HRun=0;HaplotypeScore=158.6643;InbreedingCoeff=0.9856;MQ=67.94;MQ0=15;MQRankSum=-11.559;QD=52.45;ReadPosRankSum=0.621;VQSLOD=4.5962;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:76.90:0,77,1495	0/0:3,0:3:9.03:0,9,148	0/0:47,0:22:53.28:0,53,743	0/0:50,0:23:34.30:0,34,441	1/1:17,20:37:96.03:1842,96,0	0/0:20,0:20:54.17:0,54,724	0/0:12,0:12:33.11:0,33,454	0/0:25,0:25:59.59:0,60,801	1/1:15,10:26:71.77:1202,72,0	1/1:9,9:19:53.32:1072,53,0	1/1:14,13:27:80.84:1488,81,0	0/0:11,0:11:24.05:0,24,310	0/0:20,0:20:48.14:0,48,641	0/0:19,0:19:45.15:0,45,619	0/0:23,0:23:69.21:0,69,1314	1/1:5,14:19:54.14:1268,54,0	0/0:18,0:18:41.69:0,42,920	0/0:26,0:26:62.74:0,63,804	1/1:12,2:13:37.96:454,38,0	1/1:15,23:38:99:2270,112,0	1/1:5,1:6:11.92:145,12,0	0/0:23,0:23:34.83:0,35,713	0/0:19,0:19:47.49:0,47,609	0/0:7,0:7:21.07:0,21,288	0/0:16,0:16:39.13:0,39,537	1/1:16,7:23:66.08:1111,66,0	1/1:13,11:24:66.05:1367,66,0	0/0:22,0:22:66.01:0,66,881
chr10	92991385	.	A	ACAGCAGCAG	1734.51	PASS	AB=1.000;AC=13;AF=0.361;AN=36;BaseQRankSum=-3.189;DP=612;FS=10.573;HRun=0;HaplotypeScore=186.7935;InbreedingCoeff=0.6157;MQ=58.13;MQ0=12;MQRankSum=-3.086;QD=10.26;ReadPosRankSum=-2.384;VQSLOD=1.4171;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:2.97:0,3,24	./.	./.	./.	0/0:24,0:24:3.01:0,3,32	./.	0/0:31,0:32:26.73:0,27,303	0/1:11,0:11:0:0,0,0	0/0:21,0:21:9.03:0,9,167	0/0:27,0:27:2.71:0,3,62	./.	1/1:20,15:36:3.01:134,3,0	1/1:23,1:24:36.09:742,36,0	1/1:10,13:26:15.05:671,15,0	0/0:25,0:25:36.09:0,36,787	0/0:16,0:16:9.03:0,9,187	0/0:30,0:29:54.10:0,54,1110	1/1:22,6:31:3.01:135,3,0	./.	0/0:28,0:28:6.01:0,6,62	./.	./.	./.	1/1:20,0:34:9.01:134,9,0	./.	0/0:26,0:26:3.01:0,3,63	0/0:41,0:41:24.08:0,24,415	1/1:7,0:7:3.01:50,3,0
chr10	92991400	.	GCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAA	G	7091.71	PASS	AC=20;AF=0.385;AN=52;BaseQRankSum=11.990;DP=568;FS=1.045;HRun=0;HaplotypeScore=364.5141;InbreedingCoeff=0.8527;MQ=53.69;MQ0=20;MQRankSum=-0.144;QD=29.06;ReadPosRankSum=-1.308;VQSLOD=2.3784;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:24.48:0,24,1029	0/0:4,0:4:6.45:0,6,80	0/0:11,0:3:6.02:0,6,188	0/0:18,0:9:9:0,9,84	1/1:3,26:29:12:545,12,0	0/0:9,0:9:21.07:0,21,982	0/0:33,0:33:96.31:0,96,8717	0/0:7,0:6:12.02:0,12,401	1/1:2,18:20:9.03:835,9,0	1/1:5,31:35:60.81:847,61,0	1/1:1,0:1:2.97:20,3,0	0/0:33,0:33:39.02:0,39,4044	0/0:28,0:28:84.29:0,84,9755	0/0:30,0:30:51.18:0,51,5575	0/0:26,0:26:75.26:0,75,8999	1/1:0,19:19:9.92:836,10,0	0/0:32,0:31:93.32:0,93,11825	0/0:23,0:23:42.14:0,42,4109	1/1:11,0:9:17.42:124,17,0	1/1:2,27:29:20.10:656,20,0	1/1:7,37:43:4.17:123,4,0	./.	./.	0/0:33,0:33:48.02:0,48,4159	0/0:3,0:1:3:0,3,25	1/1:3,22:25:59.50:878,59,0	1/1:0,30:30:24.08:2227,24,0	0/0:7,0:7:21.07:0,21,1776
chr10	92991559	.	C	CT	18826.14	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-12.239;DP=739;FS=6.382;HRun=6;HaplotypeScore=68.3387;InbreedingCoeff=0.9998;MQ=83.72;MQ0=0;MQRankSum=-4.473;QD=31.91;ReadPosRankSum=1.396;VQSLOD=5.3919;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,1033	0/0:11,0:11:30.07:0,30,306	0/0:26,0:26:42.05:0,42,419	0/0:17,0:17:33.04:0,33,320	1/1:4,33:37:96.27:1190,96,0	1/1:0,24:24:69.22:868,69,0	1/1:3,18:21:54.17:679,54,0	1/1:5,26:31:78.25:981,78,0	1/1:7,31:38:87.28:1094,87,0	1/1:2,24:26:69.22:868,69,0	1/1:3,28:31:87.28:1092,87,0	1/1:5,25:30:57.22:947,57,0	1/1:1,25:26:66.20:819,66,0	1/1:1,21:22:57.18:717,57,0	0/0:31,0:31:90.19:0,90,911	1/1:1,20:21:57.18:717,57,0	0/0:27,0:27:78.17:0,78,796	1/1:5,16:20:48.10:585,48,0	1/1:4,22:26:66.21:830,66,0	1/1:2,29:32:81.26:1017,81,0	1/1:4,33:37:90.29:1132,90,0	1/1:0,26:26:75.24:944,75,0	1/1:2,16:18:39.12:491,39,0	1/1:2,28:30:78.25:981,78,0	1/1:3,17:20:44:564,44,0	1/1:3,27:30:78.23:967,78,0	1/1:3,25:28:63.16:775,63,0	1/1:0,15:15:45.14:566,45,0
chr10	92994672	.	CTT	C	5716.88	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-6.253;DP=514;FS=7.119;HRun=11;HaplotypeScore=77.0641;InbreedingCoeff=0.9310;MQ=72.78;MQ0=1;MQRankSum=-1.495;QD=24.22;ReadPosRankSum=3.481;VQSLOD=4.5525;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:20:48.16:0,48,721	0/0:9,0:9:27.09:0,27,396	0/0:11,0:10:20.95:0,21,274	0/1:15,0:14:7.88:8,0,186	1/1:1,22:22:60.14:637,60,0	0/0:6,0:18:45.09:0,45,479	0/0:3,0:10:18.03:0,18,172	0/0:11,0:31:75.11:0,75,736	1/1:2,14:16:36.07:383,36,0	1/1:4,18:22:54.10:574,54,0	1/1:1,19:20:51.05:531,51,0	0/0:3,0:24:54.09:0,54,527	0/0:2,0:15:30.04:0,30,304	0/0:1,0:13:30.05:0,30,287	0/0:14,0:14:39.13:0,39,597	1/1:0,14:14:39.10:415,39,0	0/0:14,0:14:42.14:0,42,645	0/0:2,0:14:30.05:0,30,305	1/1:2,21:23:63.13:659,63,0	1/1:6,28:34:72.12:766,72,0	1/1:1,8:9:24.05:255,24,0	0/0:2,0:11:30.02:0,30,296	0/0:4,0:21:57.10:0,57,580	0/0:1,0:13:21.03:0,21,201	0/0:6,0:31:63.11:0,63,637	1/1:3,16:19:48.11:511,48,0	1/1:6,35:41:93.18:977,93,0	0/0:9,0:9:27.08:0,27,395
chr10	92995740	.	ACAAAC	A	2336.40	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=14.754;DP=521;FS=17.714;HRun=0;HaplotypeScore=167.0859;InbreedingCoeff=0.6077;MQ=50.74;MQ0=8;MQRankSum=-12.839;QD=12.77;ReadPosRankSum=1.944;VQSLOD=1.7550;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,2852	0/0:1,0:1:3.01:0,3,92	0/0:33,0:10:26.95:0,27,510	0/0:51,0:15:24.42:0,24,520	1/1:17,1:18:14.76:287,15,0	0/1:12,0:12:5.18:5,0,259	0/1:11,0:11:34.51:35,0,151	0/0:22,0:22:63.65:0,64,1592	1/1:11,2:13:27.99:344,28,0	1/1:17,0:14:3.13:183,3,0	1/1:12,0:14:24.99:281,25,0	0/0:13,0:13:27.08:0,27,802	0/0:18,0:18:54.17:0,54,1499	0/0:14,0:14:39.13:0,39,1056	0/0:18,0:18:51.16:0,51,1389	1/1:11,1:12:1.07:191,1,0	0/0:30,0:30:90.29:0,90,2426	0/0:32,0:32:92.47:0,92,2353	0/1:13,0:12:21.86:22,0,56	0/1:19,0:18:22.20:263,0,22	1/1:8,0:8:14.88:86,15,0	0/0:6,0:6:18.06:0,18,516	0/0:9,0:9:27.09:0,27,616	0/0:29,0:30:78.12:0,78,1936	0/0:17,0:17:51.17:0,51,1388	1/1:24,3:21:58.73:499,59,0	1/1:18,1:19:32.86:335,33,0	0/0:6,0:6:18.06:0,18,524
chr10	92995743	.	AAC	A	5820.54	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=12.765;DP=517;FS=10.883;HRun=0;HaplotypeScore=132.0354;InbreedingCoeff=0.9031;MQ=48.19;MQ0=8;MQRankSum=-13.146;QD=31.46;ReadPosRankSum=-0.898;VQSLOD=5.9058;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1743	0/0:2,0:2:6:0,6,79	0/0:32,0:10:26.45:0,26,399	0/0:48,0:12:27.74:0,28,314	1/1:4,14:18:51.15:712,51,0	0/1:12,0:12:24.20:43,0,24	1/1:13,0:13:10.82:77,11,0	0/0:21,0:21:57.19:0,57,1009	1/1:4,9:13:35.11:483,35,0	1/1:0,16:13:39.11:544,39,0	1/1:5,10:15:44.83:556,45,0	0/0:12,0:12:27.09:0,27,487	0/0:17,0:17:45.90:0,46,873	0/0:14,0:14:38.60:0,39,605	0/0:17,0:17:48.16:0,48,866	1/1:4,8:12:33.10:471,33,0	0/0:29,0:29:87.30:0,87,1570	0/0:33,0:33:93.29:0,93,1570	1/1:5,8:12:33.08:435,33,0	1/1:3,15:17:47.89:668,48,0	1/1:2,6:8:17.98:223,18,0	0/0:7,0:7:20.56:0,21,337	0/0:9,0:9:27.06:0,27,421	0/0:30,0:30:74.85:0,75,1203	0/0:18,0:18:54.14:0,54,867	1/1:5,23:23:55.80:852,56,0	1/1:4,15:19:55.81:757,56,0	0/0:7,0:7:21.07:0,21,366
chr10	92995753	.	AAAC	A	6015.15	PASS	AB=0.917;AC=22;AF=0.393;AN=56;BaseQRankSum=14.590;DP=532;FS=13.165;HRun=0;HaplotypeScore=147.2507;InbreedingCoeff=0.8315;MQ=46.79;MQ0=17;MQRankSum=-14.191;QD=32.00;ReadPosRankSum=-1.148;VQSLOD=4.6399;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1941	0/0:2,0:2:6.02:0,6,126	0/0:40,0:11:23.97:0,24,428	0/0:48,0:10:17.21:0,17,216	1/1:6,13:19:48.30:594,48,0	0/1:10,1:11:39.98:83,0,40	0/1:10,1:11:13.16:185,0,13	0/0:23,0:20:54.13:0,54,930	1/1:5,8:13:31.57:498,32,0	1/1:3,13:13:36.12:580,36,0	1/1:8,9:16:41.54:538,42,0	0/0:13,0:13:27.05:0,27,485	0/0:18,0:18:51.06:0,51,963	0/0:15,0:15:42.14:0,42,796	0/0:17,0:17:45.13:0,45,839	1/1:3,8:11:30.09:468,30,0	0/0:29,0:29:81.25:0,81,1612	0/0:31,0:30:87.24:0,87,1624	1/1:8,5:11:23.07:264,23,0	1/1:4,13:16:44.85:690,45,0	1/1:3,6:8:23.16:245,23,0	0/0:9,0:8:20.52:0,21,309	0/0:5,0:5:12.04:0,12,245	0/0:32,0:31:77.60:0,78,1276	0/0:17,0:17:48.16:0,48,975	1/1:9,21:24:68.38:1001,68,0	1/1:7,14:21:61.01:868,61,0	0/0:9,0:9:24.08:0,24,474
chr10	92995756	.	C	CCA	1013.76	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=6.538;DP=525;FS=1.908;HRun=0;HaplotypeScore=156.6978;InbreedingCoeff=0.2835;MQ=46.69;MQ0=19;MQRankSum=-6.967;QD=10.34;ReadPosRankSum=-5.007;VQSLOD=2.7704;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1593	0/0:2,0:2:6.02:0,6,97	0/0:39,0:10:17.11:0,17,287	0/0:43,0:9:16.58:0,17,160	0/0:17,0:17:1.93:0,2,50	1/1:3,7:11:33.07:522,33,0	1/1:5,8:13:36:539,36,0	0/0:23,0:21:60.15:0,60,831	0/0:12,0:12:18.65:0,19,77	0/1:17,0:14:6.99:7,0,29	0/1:16,0:15:33.84:34,0,58	0/0:12,0:13:27.08:0,27,408	0/0:17,0:17:48.10:0,48,745	0/0:15,0:15:42.14:0,42,640	0/0:16,0:16:45.14:0,45,697	0/0:11,0:11:1.55:0,2,15	0/0:28,0:28:78.25:0,78,1232	0/0:32,0:31:87.23:0,87,1305	0/1:11,0:9:21.44:23,0,21	0/0:17,0:16:25.35:0,25,71	0/1:9,0:8:9.02:9,0,20	0/0:8,0:7:18.04:0,18,245	0/0:4,0:4:12.04:0,12,194	0/0:32,0:31:78.05:0,78,1100	0/0:17,0:17:48.16:0,48,774	0/0:31,0:25:20.12:0,20,92	0/1:21,0:21:27.58:28,0,79	0/0:9,0:9:24.08:0,24,387
chr10	92995764	.	A	AAC	4442.83	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=14.310;DP=524;FS=14.984;HRun=0;HaplotypeScore=150.6662;InbreedingCoeff=0.9062;MQ=46.37;MQ0=21;MQRankSum=-14.166;QD=22.67;ReadPosRankSum=-0.336;VQSLOD=4.4657;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,1406	0/0:3,0:3:9.02:0,9,113	0/0:36,0:10:14.20:0,14,257	0/0:39,0:9:17.94:0,18,191	1/1:18,1:19:34.38:354,34,0	1/1:11,0:11:25.61:169,26,0	0/1:15,0:15:37.16:110,0,37	0/0:22,0:19:52.02:0,52,708	1/1:11,0:12:23.61:273,24,0	1/1:18,0:17:44.90:477,45,0	1/1:15,0:14:36.06:394,36,0	0/0:11,0:11:29.66:0,30,367	0/0:15,0:15:45.15:0,45,653	0/0:16,0:16:45.11:0,45,608	0/0:16,0:16:45.08:0,45,623	1/1:13,0:13:32.97:326,33,0	0/0:30,0:30:87.16:0,87,1162	0/0:32,0:31:90.10:0,90,1228	1/1:9,4:9:22.29:287,22,0	1/1:15,1:16:45.01:445,45,0	1/1:7,3:9:17.71:211,18,0	0/0:7,0:6:17.89:0,18,196	0/0:4,0:4:12.04:0,12,175	0/0:31,0:30:77.80:0,78,1029	0/0:18,0:18:51.14:0,51,708	1/1:25,7:27:74.43:733,74,0	1/1:18,3:21:51.33:664,51,0	0/0:10,0:9:24.08:0,24,351
chr10	92995793	.	A	AC	397.63	PASS	AB=0.615;AC=3;AF=0.054;AN=56;BaseQRankSum=6.024;DP=522;FS=8.597;HRun=0;HaplotypeScore=148.4992;InbreedingCoeff=0.5882;MQ=53.44;MQ0=12;MQRankSum=-2.934;QD=13.25;ReadPosRankSum=2.201;VQSLOD=4.6183;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:76.82:0,77,878	0/0:3,0:3:6.02:0,6,84	0/0:26,0:16:29.52:0,30,326	0/0:32,0:11:14.54:0,15,176	0/0:20,0:20:38.15:0,38,404	1/1:5,9:14:9.44:248,9,0	0/1:6,10:15:1.43:247,0,1	0/0:31,0:29:75.59:0,76,778	0/0:11,0:11:32.73:0,33,273	0/0:22,0:21:54.17:0,54,436	0/0:15,0:14:36.44:0,36,291	0/0:13,0:13:11.24:0,11,182	0/0:14,0:14:29.52:0,30,302	0/0:15,0:15:42.01:0,42,455	0/0:22,0:21:60.16:0,60,774	0/0:10,0:10:29.69:0,30,261	0/0:26,0:26:69.17:0,69,905	0/0:33,0:33:90.88:0,91,1039	0/0:18,0:13:24.01:0,24,271	0/0:14,0:14:38.77:0,39,323	0/0:14,0:12:24.54:0,25,208	0/0:5,0:5:0.20:0,0,89	0/0:5,0:5:8.50:0,8,84	0/0:33,0:32:72.21:0,72,840	0/0:14,0:14:37:0,37,456	0/0:31,0:29:54.22:0,54,569	0/0:21,0:21:28.06:0,28,391	0/0:13,0:12:24.72:0,25,344
chr10	92995800	.	A	AC	463.80	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=5.712;DP=510;FS=6.549;HRun=1;HaplotypeScore=131.8269;InbreedingCoeff=0.7058;MQ=59.62;MQ0=9;MQRankSum=-3.962;QD=14.05;ReadPosRankSum=-0.784;VQSLOD=2.5927;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:62.41:0,62,686	0/0:4,0:4:12.02:0,12,131	0/0:31,0:24:32.52:0,33,384	0/0:37,0:20:15.58:0,16,256	0/0:19,0:19:26.82:0,27,287	1/1:6,8:14:38.88:335,39,0	1/1:6,8:13:31.86:249,32,0	0/0:34,0:33:78.32:0,78,798	0/0:10,0:10:29.70:0,30,243	0/0:17,0:17:36.42:0,36,313	0/0:13,0:13:30.41:0,30,234	0/0:10,0:10:1.04:0,1,104	0/0:13,0:13:21.72:0,22,231	0/0:14,0:14:41.91:0,42,409	0/0:22,0:21:60.14:0,60,702	0/0:9,0:9:22.26:0,22,204	0/0:29,0:29:75.03:0,75,851	0/0:35,0:35:90.44:0,90,947	0/0:15,0:14:24.10:0,24,242	0/0:9,0:10:19.76:0,20,155	0/0:16,0:15:23.57:0,24,207	0/1:5,0:5:1.74:2,0,79	0/0:5,0:5:4.20:0,4,51	0/0:30,0:29:59.96:0,60,686	0/0:16,0:16:38.27:0,38,429	0/0:24,0:23:26.82:0,27,343	0/0:19,0:19:27.50:0,27,349	0/0:13,0:12:23.45:0,23,307
chr10	92996070	.	T	TA	4815.58	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=9.259;DP=348;FS=3.148;HRun=4;HaplotypeScore=39.3153;InbreedingCoeff=0.9406;MQ=64.28;MQ0=0;MQRankSum=-0.915;QD=34.64;ReadPosRankSum=1.220;VQSLOD=5.0394;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.16:0,57,645	0/0:4,0:4:12.03:0,12,136	0/0:5,0:5:12.03:0,12,136	./.	1/1:0,16:16:39.09:512,39,0	0/0:17,0:17:36.10:0,36,408	0/0:5,0:5:15.03:0,15,159	0/0:32,0:32:93.25:0,93,1038	1/1:0,7:7:21.07:287,21,0	1/1:0,14:14:42.09:537,42,0	1/1:1,12:12:30.10:409,30,0	0/0:10,0:10:27.08:0,27,306	0/0:5,0:5:15.04:0,15,170	0/0:14,0:14:33.08:0,33,364	0/0:10,0:10:30.09:0,30,340	1/1:0,10:10:27.09:369,27,0	0/0:27,0:27:72.20:0,72,816	0/0:15,0:15:39.07:0,39,427	1/1:2,20:22:60.18:790,60,0	1/1:0,11:11:30.10:410,30,0	1/1:0,5:5:12.04:164,12,0	0/0:3,0:3:9.03:0,9,102	0/0:5,0:5:12.03:0,12,136	0/0:1,0:1:3.01:0,3,34	0/0:18,0:18:54.15:0,54,612	1/1:2,23:25:63.20:845,63,0	1/1:1,15:16:36.12:492,36,0	0/0:17,0:17:48.10:0,48,528
chr10	92996549	.	GAA	G	2490.43	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=3.661;DP=572;FS=0.859;HRun=15;HaplotypeScore=77.9889;InbreedingCoeff=0.9240;MQ=71.40;MQ0=4;MQRankSum=1.161;QD=13.04;ReadPosRankSum=3.805;VQSLOD=2.9482;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:37:89.67:0,90,1105	0/0:11,0:13:26.54:0,27,309	0/0:41,0:24:32.25:0,32,296	0/0:28,0:19:22.69:0,23,297	1/1:8,19:28:49.80:408,50,0	0/0:15,0:20:49.11:0,49,552	0/0:16,0:16:37.54:0,38,378	0/0:25,2:29:0.33:0,0,475	1/1:2,9:12:11.84:150,12,0	1/1:5,17:23:42.51:414,43,0	1/1:3,12:15:23.83:211,24,0	0/0:13,0:13:27.06:0,27,338	0/0:18,0:22:53.50:0,54,655	0/0:20,0:24:50.03:0,50,588	0/0:17,0:20:41.09:0,41,472	1/1:3,12:16:14.54:176,15,0	0/0:19,0:25:49.85:0,50,562	0/0:11,0:14:35.60:0,36,444	1/1:8,6:14:18.39:159,18,0	1/1:3,13:19:41.11:325,41,0	1/1:3,3:9:2.51:56,3,0	0/0:13,0:13:36.98:0,37,450	0/0:10,0:13:23.53:0,24,245	0/0:8,0:8:21.07:0,21,273	0/0:19,0:25:41.08:0,41,466	1/1:6,17:24:41.70:412,42,0	1/1:9,18:30:35.28:391,35,0	0/0:14,0:17:44.58:0,45,511
chr10	92997400	.	A	AT	3568.61	PASS	AB=0.955;AC=22;AF=0.393;AN=56;BaseQRankSum=-4.156;DP=534;FS=0.806;HRun=11;HaplotypeScore=58.4571;InbreedingCoeff=0.8327;MQ=68.44;MQ0=3;MQRankSum=-0.147;QD=16.45;ReadPosRankSum=-1.095;VQSLOD=4.0657;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:55.77:0,56,417	0/0:10,0:11:25.91:0,26,188	0/0:24,0:13:1.16:0,1,36	0/1:22,0:14:4.26:4,0,18	1/1:6,20:27:53.62:468,54,0	0/0:26,0:26:70.76:0,71,538	0/0:21,0:21:53.74:0,54,416	0/0:24,0:24:56.76:0,57,439	1/1:3,8:11:29.97:285,30,0	1/1:3,21:24:62.98:586,63,0	1/1:4,15:19:35.84:325,36,0	0/0:14,0:14:35.85:0,36,279	0/1:9,1:10:9.53:10,0,116	0/0:15,0:15:41.79:0,42,318	0/0:19,1:20:14.29:0,14,287	1/1:2,7:9:15.03:152,15,0	0/0:28,0:29:73.72:0,74,558	0/0:27,0:27:65.60:0,66,495	1/1:9,10:19:12.83:311,13,0	1/1:8,16:24:24.73:399,25,0	1/1:5,13:18:30.06:304,30,0	0/0:16,0:16:35.82:0,36,274	0/0:24,0:24:65.73:0,66,507	0/0:16,0:16:35.80:0,36,272	0/0:22,0:22:56.74:0,57,439	1/1:3,14:17:44.57:429,45,0	1/1:4,13:17:32.69:297,33,0	0/0:4,0:5:11.95:0,12,93
chr10	92999927	.	A	AACTCAG	18180.71	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=6.241;DP=658;FS=14.107;HRun=0;HaplotypeScore=186.4035;InbreedingCoeff=0.9996;MQ=58.63;MQ0=1;MQRankSum=-17.873;QD=79.74;ReadPosRankSum=-4.147;VQSLOD=3.7789;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,3133	0/0:14,0:13:39.13:0,39,957	0/0:11,0:10:27.09:0,27,572	0/0:16,0:15:41.95:0,42,772	1/1:8,18:26:54.19:1821,54,0	0/0:31,0:31:84.27:0,84,1993	0/0:20,0:20:36.26:0,36,1318	0/0:29,0:29:81.23:0,81,1892	1/1:9,18:28:69.24:2473,69,0	1/1:10,14:24:69.23:2203,69,0	1/1:6,9:15:29.92:975,30,0	0/0:26,0:26:72.24:0,72,1727	0/0:22,0:22:57.20:0,57,1364	0/0:22,0:22:60.21:0,60,1478	0/0:30,0:30:84.29:0,84,2041	1/1:8,19:27:66.23:2253,66,0	0/0:37,0:37:99:0,108,2645	0/0:24,0:24:69.24:0,69,1650	1/1:10,6:16:42.14:1325,42,0	1/1:6,17:23:57.20:2015,57,0	1/1:12,7:18:29.82:921,30,0	0/0:17,0:17:51.17:0,51,1189	0/0:12,0:12:33.11:0,33,766	0/0:33,0:33:99:0,99,2355	0/0:25,0:25:69.24:0,69,1662	1/1:11,13:23:69.17:2142,69,0	1/1:6,18:24:60.16:2054,60,0	0/0:17,0:17:51.18:0,51,1256
chr10	92999946	.	C	CTCTCGAGT	22856.74	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=4.203;DP=669;FS=2.425;HRun=0;HaplotypeScore=200.8734;InbreedingCoeff=0.9906;MQ=59.79;MQ0=0;MQRankSum=-17.991;QD=93.29;ReadPosRankSum=-2.913;VQSLOD=4.5936;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,3710	0/0:14,0:14:39.13:0,39,1104	0/0:9,0:9:24.08:0,24,607	0/0:7,0:7:9.66:0,10,247	1/1:8,19:28:59.01:2327,59,0	0/0:27,0:27:75.22:0,75,2059	0/0:22,0:22:66.23:0,66,1829	0/0:29,0:29:72.20:0,72,1943	1/1:11,17:30:63.69:2671,64,0	1/1:12,13:26:72.25:2879,72,0	1/1:5,6:13:24.04:933,24,0	0/0:29,0:29:78.27:0,78,2196	0/0:18,0:18:48.64:0,49,1311	0/0:24,0:24:69.24:0,69,1919	0/0:30,0:30:90.30:0,90,2419	1/1:10,18:28:66.23:2741,66,0	0/0:41,0:41:99:0,117,3031	0/0:21,0:21:57.15:0,57,1433	1/1:8,8:18:45.13:1567,45,0	1/1:8,18:27:60.16:2495,60,0	1/1:6,5:11:18.06:708,18,0	0/0:18,0:18:54.17:0,54,1468	0/0:14,0:14:42.13:0,42,1111	0/0:30,0:30:87.30:0,87,2449	0/0:30,0:30:80.74:0,81,2029	1/1:7,17:29:81.26:2997,81,0	1/1:10,24:33:87.26:3540,87,0	0/0:13,0:13:39.13:0,39,1036
chr10	93000033	.	ATTT	A	5434.86	PASS	AB=0.769;AC=22;AF=0.393;AN=56;BaseQRankSum=-8.643;DP=590;FS=0.365;HRun=13;HaplotypeScore=131.3278;InbreedingCoeff=0.8498;MQ=64.68;MQ0=0;MQRankSum=1.247;QD=22.65;ReadPosRankSum=2.979;VQSLOD=3.4330;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:36:67.85:0,68,515	0/0:13,0:13:36.03:0,36,622	0/1:11,0:8:4.95:5,0,112	0/0:14,0:10:12.24:0,12,224	0/0:24,0:24:27.65:0,28,296	0/0:4,0:20:6.70:0,7,26	0/1:2,1:14:13.48:21,0,13	1/1:11,29:40:87.13:1036,87,0	0/0:17,0:17:38.87:0,39,340	0/0:19,0:19:37.31:0,37,323	0/0:20,0:20:50.69:0,51,415	1/1:3,17:20:39.09:474,39,0	1/1:1,14:15:33.08:399,33,0	1/1:2,20:22:48.12:580,48,0	0/0:18,0:18:48.08:0,48,788	0/0:16,0:16:41.76:0,42,356	0/0:43,0:43:99:0,111,2045	1/1:3,22:26:57.08:673,57,0	0/0:21,0:21:39.52:0,40,326	0/0:21,0:21:54.38:0,54,443	0/0:5,0:5:14.87:0,15,112	1/1:3,14:17:36.04:432,36,0	1/1:5,20:25:56.61:686,57,0	1/1:2,15:17:26.64:328,27,0	1/1:6,22:28:51.11:618,51,0	0/0:27,0:27:50.64:0,51,437	0/0:36,0:35:81.04:0,81,671	1/1:0,5:5:15.05:182,15,0
chr10	93000045	.	T	TAA	6640.18	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-1.989;DP=549;FS=1.982;HRun=0;HaplotypeScore=117.4927;InbreedingCoeff=0.9860;MQ=66.23;MQ0=0;MQRankSum=-3.322;QD=35.13;ReadPosRankSum=-0.417;VQSLOD=6.8438;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:79.02:0,79,694	0/0:11,0:11:33.11:0,33,533	0/0:12,0:10:21.03:0,21,264	0/0:11,0:9:8.67:0,9,183	1/1:4,18:24:54.19:651,54,0	0/0:18,0:18:38.90:0,39,371	0/0:15,0:15:38.87:0,39,316	0/0:32,0:32:92.57:0,93,735	1/1:3,10:13:35.11:504,35,0	1/1:5,14:19:55.98:778,56,0	1/1:4,14:18:48.97:687,49,0	0/0:20,0:20:44.80:0,45,375	0/0:16,0:16:32.74:0,33,304	0/0:22,0:22:41.80:0,42,388	0/0:18,0:18:52.02:0,52,718	1/1:5,10:15:28.38:472,28,0	0/0:41,0:41:99:0,113,1712	0/0:24,0:24:53.72:0,54,436	1/1:15,7:22:50.76:608,51,0	1/1:3,15:18:54.07:719,54,0	1/1:1,4:6:15.05:225,15,0	0/0:15,0:15:26.72:0,27,304	0/0:22,0:22:53.73:0,54,443	0/0:16,0:16:29.85:0,30,243	0/0:27,0:27:59.79:0,60,567	1/1:7,14:21:50.30:805,50,0	1/1:10,23:32:85.06:1192,85,0	0/0:7,0:7:17.93:0,18,154
chr10	93000046	.	T	TAAA	8576.61	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-5.673;DP=558;FS=0.000;HRun=3;HaplotypeScore=126.9855;InbreedingCoeff=0.9638;MQ=65.88;MQ0=0;MQRankSum=-3.925;QD=43.32;ReadPosRankSum=-0.675;VQSLOD=3.8162;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:77.92:0,78,887	0/0:11,0:11:33.11:0,33,526	0/0:12,0:10:21.06:0,21,287	0/0:10,0:9:1.11:0,1,164	1/1:23,0:23:56.13:846,56,0	0/0:17,0:17:48.11:0,48,521	0/0:15,0:15:42.10:0,42,463	0/0:32,0:32:93.14:0,93,1021	1/1:12,2:14:41.17:657,41,0	1/1:17,4:21:60.20:1060,60,0	1/1:18,1:19:53.04:793,53,0	0/0:20,0:20:48.11:0,48,522	0/0:16,0:16:35.81:0,36,404	0/0:22,0:22:48.09:0,48,529	0/0:18,0:18:39.13:0,39,617	1/1:14,1:15:39.10:612,39,0	0/0:40,0:40:99:0,102,1588	0/0:24,0:24:57.12:0,57,606	1/1:19,4:23:57.17:942,57,0	1/1:21,0:21:60.13:975,60,0	1/1:8,0:8:18.06:283,18,0	0/0:15,0:15:36.05:0,36,417	0/0:23,0:23:57.59:0,58,611	0/0:16,0:16:30.06:0,30,327	0/0:27,0:27:63.15:0,63,731	1/1:20,1:21:60.20:1040,60,0	1/1:32,1:32:89.90:1368,90,0	0/0:9,0:9:21.03:0,21,226
chr10	93000815	.	CCA	C	4642.61	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=7.575;DP=337;FS=21.004;HRun=0;HaplotypeScore=44.6590;InbreedingCoeff=0.9865;MQ=96.05;MQ0=1;MQRankSum=-2.199;QD=45.97;ReadPosRankSum=2.751;VQSLOD=3.6911;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:42.14:0,42,852	0/0:7,0:7:18.06:0,18,366	0/0:14,0:14:36.12:0,36,688	0/0:20,0:20:57.18:0,57,1003	1/1:0,12:11:33.11:538,33,0	0/0:9,0:9:27.09:0,27,549	0/0:8,0:8:24.08:0,24,488	0/0:25,0:25:75.26:0,75,1518	1/1:0,6:6:18.06:294,18,0	1/1:0,5:5:15.05:244,15,0	1/1:0,8:8:21.07:343,21,0	0/0:13,0:13:36.12:0,36,732	0/0:12,0:12:36.12:0,36,731	0/0:9,0:9:27.09:0,27,523	0/0:9,0:9:27.09:0,27,549	1/1:0,12:12:36.12:587,36,0	0/0:28,0:28:81.28:0,81,1646	0/0:17,0:17:48.16:0,48,975	1/1:0,13:13:36.12:587,36,0	1/1:0,6:6:18.06:294,18,0	1/1:0,18:18:45.15:734,45,0	0/0:6,0:6:18.06:0,18,366	0/0:4,0:4:12.04:0,12,244	0/0:10,0:10:27.09:0,27,549	0/0:13,0:13:39.13:0,39,792	1/1:0,11:11:33.11:538,33,0	1/1:0,10:10:30.10:486,30,0	0/0:18,0:18:54.19:0,54,1086
chr10	93000885	.	A	ATGTGTGTG	93.92	PASS	AB=0.792;AC=2;AF=0.040;AN=50;BaseQRankSum=0.841;DP=224;FS=3.747;HRun=0;HaplotypeScore=65.4740;InbreedingCoeff=-0.1056;MQ=40.86;MQ0=26;MQRankSum=-1.652;QD=6.71;ReadPosRankSum=-0.430;VQSLOD=1.3377;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:9.03:0,9,176	0/0:4,0:4:8.95:0,9,130	0/0:7,0:2:6:0,6,54	0/0:12,0:2:5.35:0,5,29	./.	0/1:7,0:6:32.41:98,0,32	0/1:2,4:6:27.72:82,0,28	0/0:20,0:15:26.99:0,27,164	0/0:2,0:2:3.01:0,3,79	0/0:8,0:7:18.04:0,18,324	0/0:6,0:6:6.02:0,6,125	0/0:5,0:4:9.03:0,9,209	0/0:7,0:6:12.04:0,12,332	0/0:6,0:6:6.02:0,6,117	0/0:6,0:6:15.02:0,15,261	0/0:3,0:3:3.41:0,3,19	0/0:26,0:25:55.75:0,56,1246	0/0:13,0:13:18.19:0,18,604	0/0:11,0:11:25.26:0,25,230	./.	./.	0/0:3,0:2:6.02:0,6,106	0/0:5,0:5:6.02:0,6,174	0/0:7,0:6:6.02:0,6,105	0/0:5,0:5:9.03:0,9,227	0/0:5,0:2:6.02:0,6,77	0/0:11,0:11:9.03:0,9,125	0/0:17,0:12:23.70:0,24,295
chr10	93000887	.	ATGTGTG	A	316.88	PASS	AB=0.864;AC=12;AF=0.261;AN=46;BaseQRankSum=4.310;DP=230;FS=4.562;HRun=0;HaplotypeScore=51.8339;InbreedingCoeff=0.4656;MQ=41.00;MQ0=26;MQRankSum=-1.988;QD=5.87;ReadPosRankSum=0.796;VQSLOD=0.9533;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:12:6.02:84,6,0	0/0:4,0:4:6.02:0,6,172	./.	./.	./.	0/0:7,0:7:13.57:0,14,210	0/0:9,0:7:6.02:0,6,105	0/0:20,0:15:27.77:0,28,413	1/1:1,1:2:3.01:47,3,0	0/1:5,3:7:8.81:138,0,9	1/1:3,1:6:3:25,3,0	0/0:5,0:4:9.03:0,9,214	0/0:8,0:7:15.04:0,15,345	0/0:4,0:5:9.03:0,9,218	0/0:6,0:6:12.04:0,12,319	0/0:2,1:3:0.89:0,1,2	0/0:27,0:26:43.39:0,43,1141	0/0:14,0:14:23.97:0,24,547	0/1:10,0:10:31.68:32,0,62	./.	./.	0/0:3,0:2:6.02:0,6,150	0/0:5,0:5:9.03:0,9,247	0/0:7,0:6:9.02:0,9,189	0/0:6,0:6:9.03:0,9,272	1/1:4,1:2:3.01:55,3,0	1/1:3,8:11:5.95:73,6,0	0/0:16,0:12:12.04:0,12,287
chr10	93000967	.	G	GTTTT	2887.37	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=3.162;DP=411;FS=0.578;HRun=12;HaplotypeScore=104.9830;InbreedingCoeff=0.9273;MQ=69.40;MQ0=0;MQRankSum=-4.298;QD=24.26;ReadPosRankSum=-6.572;VQSLOD=0.7671;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:37:87.95:0,88,1028	0/0:5,0:5:12.04:0,12,157	0/0:19,0:14:14.66:0,15,162	0/0:23,0:19:7.88:0,8,105	1/1:8,8:18:33.39:474,33,0	0/0:13,0:13:36.07:0,36,473	0/0:9,0:9:14.94:0,15,182	0/0:24,0:28:40.04:0,40,464	1/1:4,2:6:10.06:138,10,0	1/1:7,4:12:24.08:423,24,0	1/1:6,2:13:23.56:356,24,0	0/0:10,0:13:17.66:0,18,203	0/0:16,0:16:23.66:0,24,315	0/0:9,0:11:14.72:0,15,164	0/0:17,0:17:20.61:0,21,275	1/1:4,4:9:15.05:309,15,0	0/0:11,0:15:40.32:0,40,468	0/0:13,0:15:29.37:0,29,337	1/1:8,2:14:24.08:411,24,0	1/1:5,4:10:21.07:370,21,0	1/1:0,5:6:3.90:70,4,0	0/0:12,0:12:26.88:0,27,318	0/0:16,0:16:35.94:0,36,447	0/0:16,0:17:25.69:0,26,336	0/0:10,0:10:7.72:0,8,117	1/1:11,0:11:21.06:320,21,0	1/1:19,0:20:16.87:229,17,0	0/0:11,0:14:34.72:0,35,427
chr10	93003307	.	TA	T	2884.22	PASS	AB=0.556;AC=15;AF=0.268;AN=56;BaseQRankSum=12.076;DP=507;FS=1.345;HRun=7;HaplotypeScore=50.2690;InbreedingCoeff=0.9049;MQ=78.07;MQ0=0;MQRankSum=0.215;QD=22.53;ReadPosRankSum=4.061;VQSLOD=3.4600;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.18:0,57,716	0/0:7,0:7:21.07:0,21,264	0/0:14,0:13:27.02:0,27,262	0/0:13,0:12:14.84:0,15,167	0/0:30,0:30:87.25:0,87,1055	0/0:15,0:15:45.14:0,45,566	0/0:15,0:15:36.10:0,36,439	0/0:38,0:38:99:0,102,1228	0/0:16,0:16:39.10:0,39,464	0/0:27,0:27:72.20:0,72,865	0/0:30,0:30:87.23:0,87,1045	1/1:2,12:14:33.07:337,33,0	1/1:2,11:13:33.07:336,33,0	1/1:1,10:11:30.07:306,30,0	0/0:15,0:15:39.12:0,39,491	0/0:14,0:14:42.13:0,42,517	0/0:17,0:17:48.14:0,48,591	1/1:1,15:16:33.07:336,33,0	0/0:15,0:15:42.09:0,42,502	0/0:26,0:26:69.21:0,69,855	0/0:10,0:10:30.06:0,30,350	1/1:4,11:15:27.05:275,27,0	1/1:0,20:20:54.12:551,54,0	0/1:3,12:15:27.37:270,0,27	1/1:1,23:24:66.15:673,66,0	0/0:23,0:23:69.22:0,69,868	0/0:18,0:18:45.14:0,45,566	0/0:17,0:17:36.12:0,36,453
chr10	93003574	.	TCCCCCAG	T	1735.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.055;DP=527;FS=0.759;HRun=0;HaplotypeScore=119.7680;InbreedingCoeff=0.9884;MQ=88.49;MQ0=0;MQRankSum=-7.614;QD=54.25;ReadPosRankSum=-2.916;VQSLOD=2.6755;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:48.16:0,48,1847	0/0:7,0:7:18.06:0,18,697	0/0:15,0:15:45.15:0,45,1711	0/0:24,0:24:63.22:0,63,2203	0/0:22,0:22:60.21:0,60,2310	0/0:19,0:19:51.18:0,51,1922	0/0:16,0:16:45.15:0,45,1571	1/1:7,25:32:75.26:1831,75,0	0/0:12,0:12:33.11:0,33,1271	0/0:29,0:29:81.28:0,81,3077	0/0:25,0:25:66.23:0,66,2470	0/0:10,0:10:24.08:0,24,862	0/0:10,0:10:30.10:0,30,1142	0/0:19,0:19:57.18:0,57,2105	0/0:15,0:15:45.15:0,45,1696	0/0:14,0:14:42.14:0,42,1630	0/0:11,0:11:30.10:0,30,1164	0/0:24,0:24:69.24:0,69,2651	0/0:23,0:23:60.21:0,60,2328	0/0:25,0:25:69.24:0,69,2611	0/0:18,0:18:51.18:0,51,1960	0/0:13,0:13:33.10:0,33,1177	0/0:17,0:17:51.18:0,51,1978	0/0:17,0:17:45.15:0,45,1723	0/0:23,0:23:60.16:0,60,2039	0/0:26,0:26:75.26:0,75,2873	0/0:26,0:26:75.26:0,75,2810	0/0:15,0:15:39.13:0,39,1513
chr10	93003944	.	TCACACACACACACACA	T	4135.96	PASS	AB=0.855;AC=31;AF=0.620;AN=50;BaseQRankSum=5.088;DP=486;FS=8.372;HRun=0;HaplotypeScore=181.9230;InbreedingCoeff=0.4544;MQ=53.10;MQ0=30;MQRankSum=-2.384;QD=12.24;ReadPosRankSum=0.622;VQSLOD=1.8290;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:21.99:0,22,915	0/0:3,0:3:6.02:0,6,157	./.	0/1:42,0:12:0:0,0,0	0/0:12,9:21:0.47:0,0,1	0/0:9,0:12:20.56:0,21,544	0/0:17,0:19:21.05:0,21,470	1/1:22,0:22:2.84:9,3,0	1/1:6,1:7:2.53:131,3,0	1/1:10,16:23:41.89:868,42,0	1/1:8,0:8:3.01:54,3,0	1/1:10,0:22:12.27:397,12,0	1/1:10,0:21:14.37:475,14,0	1/1:17,0:25:11.54:362,12,0	0/0:10,0:10:21.07:0,21,1319	1/1:13,16:29:11.78:495,12,0	0/0:18,0:18:24.08:0,24,1377	0/1:15,0:15:99:101,0,115	1/1:10,5:15:14.48:315,14,0	1/1:6,2:8:3.01:56,3,0	0/1:23,0:23:53.89:54,0,158	./.	0/1:5,0:10:0:0,0,0	1/1:13,0:15:6.02:223,6,0	1/1:8,0:11:5.61:121,6,0	0/1:10,10:20:82.84:342,0,83	1/1:8,5:13:3.01:132,3,0	./.
chr10	93004835	.	TG	T	4513.63	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=-2.434;DP=208;FS=19.031;HRun=5;HaplotypeScore=25.1215;InbreedingCoeff=0.4120;MQ=39.43;MQ0=4;MQRankSum=-2.434;QD=22.91;ReadPosRankSum=1.605;VQSLOD=2.8194;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:41.81:360,42,0	1/1:0,2:2:6.02:66,6,0	./.	0/0:6,0:2:6.01:0,6,61	1/1:0,12:10:20.77:138,21,0	1/1:0,7:7:15.01:153,15,0	1/1:0,7:7:12.03:129,12,0	1/1:0,7:6:18.01:188,18,0	1/1:0,5:5:15.04:162,15,0	1/1:0,10:9:27.08:304,27,0	1/1:0,6:6:8.98:85,9,0	1/1:0,7:7:20.97:203,21,0	1/1:0,5:5:11.91:92,12,0	1/1:0,5:5:11.91:92,12,0	1/1:0,11:11:32.92:306,33,0	1/1:0,3:3:8.99:87,9,0	1/1:0,11:11:30.04:319,30,0	1/1:0,11:11:33.09:368,33,0	1/1:0,4:4:12.03:136,12,0	1/1:0,6:6:11.87:80,12,0	1/1:0,4:3:8.94:72,9,0	1/1:0,7:7:14.92:123,15,0	1/1:0,11:11:23.82:184,24,0	1/1:2,9:11:3.01:33,3,0	1/1:0,4:4:8.94:72,9,0	1/1:0,15:15:42.12:472,42,0	1/1:0,11:11:29.84:253,30,0	1/1:0,1:1:3.01:33,3,0
chr10	93004906	.	G	GA	1636.17	PASS	AB=0.861;AC=25;AF=0.446;AN=56;BaseQRankSum=-0.736;DP=381;FS=8.075;HRun=14;HaplotypeScore=62.2849;InbreedingCoeff=0.3716;MQ=60.41;MQ0=7;MQRankSum=2.002;QD=6.99;ReadPosRankSum=-2.270;VQSLOD=1.5334;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,2:31:64.65:359,65,0	0/0:2,0:2:2.93:0,3,19	1/1:12,0:7:1.90:16,2,0	0/1:24,0:14:15.95:21,0,16	0/0:12,0:11:5.72:0,6,38	0/1:10,1:12:1.54:2,0,102	0/0:16,0:18:27.62:0,28,165	1/1:7,12:20:37.98:320,38,0	0/1:9,1:10:2.74:3,0,111	0/0:10,0:11:15.80:0,16,89	0/0:6,0:6:8.81:0,9,58	1/1:7,5:13:0.94:108,1,0	1/1:3,3:8:8:87,8,0	0/1:3,3:6:7.28:63,0,7	0/0:7,0:7:11.73:0,12,77	0/0:6,0:6:14.76:0,15,96	0/0:22,0:23:46.19:0,46,294	0/1:16,10:26:61.44:257,0,61	0/0:12,0:12:18.78:0,19,107	0/0:7,0:8:7.88:0,8,44	0/0:13,1:16:22.63:0,23,119	1/1:3,2:5:5.99:49,6,0	1/1:3,2:5:6:53,6,0	1/1:10,15:26:27.83:375,28,0	0/1:6,1:7:9.24:42,0,9	0/0:22,0:22:35.33:0,35,230	0/1:23,2:24:34.78:35,0,186	1/1:1,1:1:3:26,3,0
chr10	93005245	.	T	TGA	322.56	PASS	AB=1.000;AC=13;AF=0.250;AN=52;BaseQRankSum=8.316;DP=444;FS=27.915;HRun=0;HaplotypeScore=93.6849;InbreedingCoeff=-0.0078;MQ=45.09;MQ0=24;MQRankSum=-0.162;QD=1.76;ReadPosRankSum=0.836;VQSLOD=-0.1613;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:46.73:0,47,562	0/0:4,0:4:7.17:0,7,43	./.	./.	0/0:22,0:21:8.35:0,8,95	0/0:19,0:17:29.28:0,29,257	0/0:10,0:9:5.91:0,6,57	0/0:14,0:13:31.25:0,31,228	0/0:9,0:8:7.55:0,8,54	0/1:21,0:21:32.33:32,0,203	0/0:18,0:17:6.89:0,7,66	0/1:14,0:14:11.23:77,0,11	0/1:17,0:16:16.07:16,0,44	1/1:14,0:13:2.81:24,3,0	0/0:17,0:17:24.48:0,24,240	0/0:10,0:10:6.39:0,6,88	0/0:25,0:24:50.83:0,51,473	0/0:16,0:15:37.38:0,37,322	0/1:12,0:11:44.96:45,0,77	0/1:17,0:16:9.18:9,0,59	0/0:16,0:12:5.99:0,6,48	1/1:17,0:16:6.10:47,6,0	0/1:13,0:13:25.50:76,0,26	0/1:27,0:26:2.39:104,0,2	0/0:10,5:15:17.43:0,17,123	0/1:22,0:20:5.47:5,0,216	0/0:13,0:13:1.24:0,1,105	0/1:9,0:7:29.14:29,0,54
chr10	93005277	.	C	CGAGA	2458.95	PASS	AB=0.906;AC=21;AF=0.375;AN=56;BaseQRankSum=2.619;DP=534;FS=1.099;HRun=0;HaplotypeScore=119.2157;InbreedingCoeff=0.5313;MQ=55.55;MQ0=22;MQRankSum=-0.930;QD=10.46;ReadPosRankSum=-0.588;VQSLOD=3.0709;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:42.12:0,42,686	0/0:5,0:5:9.03:0,9,136	0/0:20,0:10:21.99:0,22,245	0/0:45,0:15:2.09:0,2,261	0/0:4,23:27:0.43:0,0,1	0/0:20,0:19:29.72:0,30,432	0/0:16,0:16:20.78:0,21,322	0/0:21,0:20:14.38:0,14,400	1/1:13,0:13:20.84:268,21,0	1/1:8,14:24:47.49:627,47,0	0/1:2,16:18:0:0,0,0	0/0:19,0:19:4.77:0,5,308	0/0:16,0:15:3.22:0,3,167	0/0:13,0:13:3.78:0,4,124	0/0:13,0:13:21.07:0,21,301	1/1:13,1:14:23.98:349,24,0	0/0:21,0:20:38.87:0,39,543	0/0:8,0:8:17.73:0,18,204	1/1:9,8:15:29.98:429,30,0	1/1:3,17:21:5.87:96,6,0	1/1:14,0:12:9.02:125,9,0	0/0:21,0:21:13.42:0,13,204	0/1:16,0:16:4.01:4,0,98	0/1:27,0:26:27.76:28,0,311	0/1:19,0:18:11.01:11,0,58	1/1:4,15:21:44.81:554,45,0	1/1:5,11:17:5.91:83,6,0	0/1:10,0:10:69.39:69,0,106
chr10	93006074	.	T	TTTCA	1442.18	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=-0.977;DP=643;FS=0.756;HRun=0;HaplotypeScore=102.0243;InbreedingCoeff=0.9808;MQ=70.33;MQ0=3;MQRankSum=-2.160;QD=21.85;ReadPosRankSum=-3.404;VQSLOD=2.7979;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:33.09:0,33,490	0/0:10,0:10:18.06:0,18,280	./.	./.	0/0:32,0:32:75.24:0,75,1143	1/1:13,11:24:42.14:937,42,0	1/1:15,7:22:24.07:521,24,0	1/1:20,0:20:12.01:121,12,0	0/0:28,0:28:54.15:0,54,796	0/0:35,0:35:66.20:0,66,969	0/0:33,0:33:72.24:0,72,1121	0/0:19,0:19:27.09:0,27,420	0/0:19,0:19:36.11:0,36,541	0/0:19,0:19:39.12:0,39,585	0/0:26,0:26:36.12:0,36,560	0/0:24,0:24:48.16:0,48,744	0/0:24,0:24:39.13:0,39,601	0/0:21,0:21:24.08:0,24,374	0/0:23,0:21:27.09:0,27,420	0/0:32,0:33:51.14:0,51,727	0/0:17,0:17:33.11:0,33,514	0/0:18,0:18:24.08:0,24,373	0/0:14,0:14:21.07:0,21,327	0/0:13,0:13:30.10:0,30,467	0/0:32,0:32:52.99:0,53,795	0/0:27,0:27:51.17:0,51,794	0/0:21,0:21:30.10:0,30,467	0/0:27,0:27:54.18:0,54,841
chr10	93006122	.	C	CT	1382.90	PASS	AB=0.923;AC=7;AF=0.125;AN=56;BaseQRankSum=-5.402;DP=612;FS=0.000;HRun=8;HaplotypeScore=63.7427;InbreedingCoeff=0.8304;MQ=64.57;MQ0=3;MQRankSum=-2.168;QD=17.51;ReadPosRankSum=0.825;VQSLOD=3.4611;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.02:0,60,549	0/0:7,0:7:15:0,15,137	0/0:20,0:15:45.02:0,45,408	0/0:24,0:18:46.70:0,47,401	0/0:25,0:25:75.01:0,75,676	1/1:4,22:26:60.18:692,60,0	1/1:6,15:21:42.12:485,42,0	0/0:30,0:30:63.01:0,63,577	0/0:23,0:23:57.03:0,57,522	0/0:38,0:38:93.03:0,93,849	0/0:30,0:30:72.02:0,72,659	0/0:19,0:19:48.02:0,48,439	0/0:15,0:15:42.02:0,42,384	0/0:24,0:24:68.35:0,68,626	0/0:20,0:20:57.02:0,57,517	0/0:26,0:26:69.03:0,69,631	0/0:22,0:22:60.03:0,60,549	0/0:12,0:12:30.01:0,30,275	0/0:23,0:23:57.03:0,57,522	0/0:23,0:23:57:0,57,517	0/0:20,0:20:45.01:0,45,412	0/0:15,0:15:42.02:0,42,384	0/1:11,1:12:4.61:5,0,217	0/0:13,1:14:4.36:0,4,286	0/0:25,0:25:69.01:0,69,625	0/0:27,0:27:78.04:0,78,714	0/0:27,0:27:78.04:0,78,714	1/1:10,10:20:30.09:346,30,0
chr10	93009012	.	T	TAAC	1071.72	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=0.074;DP=619;FS=12.455;HRun=0;HaplotypeScore=125.3082;InbreedingCoeff=0.6822;MQ=66.19;MQ0=0;MQRankSum=-5.593;QD=19.14;ReadPosRankSum=-4.829;VQSLOD=1.4418;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:75.46:0,75,1122	0/0:11,0:11:26.92:0,27,362	0/0:28,0:25:29.26:0,29,436	0/1:20,0:20:7.30:7,0,265	0/0:34,0:34:72.22:0,72,1005	0/0:22,0:22:45.14:0,45,634	0/0:21,0:21:50.92:0,51,681	1/1:20,16:36:63.14:1165,63,0	0/0:16,0:16:39.12:0,39,547	0/0:28,0:28:72.23:0,72,1012	0/0:11,0:11:24.06:0,24,297	0/0:13,0:13:30.09:0,30,417	0/0:27,0:27:54.15:0,54,729	0/0:30,0:30:56.69:0,57,779	0/0:31,0:31:66.21:0,66,938	0/0:20,0:20:54.15:0,54,744	0/0:18,0:18:51.17:0,51,737	0/0:17,0:17:30.09:0,30,416	0/0:19,0:19:30.10:0,30,432	0/0:17,0:17:45.13:0,45,615	0/0:11,0:11:30.10:0,30,434	0/0:22,0:22:39.13:0,39,564	0/0:16,0:16:30.10:0,30,433	0/0:17,0:18:42.08:0,42,549	0/0:26,0:26:54.17:0,54,764	0/0:36,0:36:78.26:0,78,1128	0/0:30,0:29:72.22:0,72,1020	0/0:8,0:8:21.07:0,21,304
chr10	93009037	.	G	GT	4314.68	PASS	AB=0.632;AC=21;AF=0.375;AN=56;BaseQRankSum=15.347;DP=582;FS=9.737;HRun=2;HaplotypeScore=85.1770;InbreedingCoeff=0.9401;MQ=67.89;MQ0=0;MQRankSum=-0.709;QD=19.61;ReadPosRankSum=2.502;VQSLOD=3.9984;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.29:0,93,1151	0/0:10,0:10:27.08:0,27,334	0/0:18,0:17:35.97:0,36,396	0/0:11,0:11:15.96:0,16,157	0/0:27,0:27:81.24:0,81,991	1/1:6,15:22:39.37:424,39,0	1/1:1,18:19:48.14:543,48,0	1/1:23,0:33:36.92:176,37,0	0/0:15,0:15:42.13:0,42,520	0/0:32,0:32:90.28:0,90,1107	0/0:12,0:12:30.09:0,30,372	1/1:3,14:17:33.08:376,33,0	1/1:3,16:19:42.11:475,42,0	1/1:5,18:23:42.45:474,42,0	0/0:28,0:28:84.25:0,84,1024	0/0:23,0:23:69.07:0,69,821	0/0:24,0:24:69.19:0,69,839	0/0:16,0:16:36.11:0,36,446	0/0:16,0:16:45.07:0,45,520	0/0:18,0:18:48.14:0,48,580	0/0:14,0:14:42.13:0,42,521	1/1:1,18:19:48.14:550,48,0	1/1:4,9:13:25.61:279,26,0	1/1:4,12:16:5.71:307,6,0	1/1:5,22:26:54.10:589,54,0	0/0:32,0:32:96.30:0,96,1188	0/0:33,0:32:99:0,99,1188	0/1:5,7:12:0.81:122,0,1
chr10	93009915	.	ATCTCTCTCTCTCTC	A	1509.80	PASS	AB=0.956;AC=10;AF=0.185;AN=54;BaseQRankSum=4.624;DP=534;FS=0.866;HRun=0;HaplotypeScore=197.1993;InbreedingCoeff=0.1762;MQ=64.02;MQ0=20;MQRankSum=-4.168;QD=11.18;ReadPosRankSum=-0.637;VQSLOD=2.6819;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:21.52:0,22,1066	1/1:5,6:11:15.05:504,15,0	./.	0/0:35,0:12:9.48:0,9,125	0/0:21,0:21:17.87:0,18,845	0/0:17,0:17:24.06:0,24,599	0/0:12,0:11:12.04:0,12,297	0/0:32,0:31:12.04:0,12,377	0/0:19,0:19:18.06:0,18,747	0/0:25,0:24:36.12:0,36,1714	0/0:25,0:23:24.08:0,24,1128	0/1:21,0:21:11.91:95,0,12	0/1:21,0:21:99:99,0,174	0/1:12,0:12:54.34:136,0,54	1/1:9,7:17:12.04:452,12,0	0/0:15,0:15:18.02:0,18,712	0/0:22,0:21:51.16:0,51,2539	0/1:9,5:14:99:224,0,142	0/0:18,0:17:14.08:0,14,579	0/0:22,0:22:22.79:0,23,867	0/0:12,0:9:3.01:0,3,140	0/0:12,0:12:8.88:0,9,140	0/1:17,0:17:99:122,0,114	0/0:11,0:12:5.19:0,5,218	0/1:20,0:20:22.39:26,0,22	0/0:16,0:16:23.66:0,24,782	0/0:22,0:22:45.08:0,45,1671	0/0:12,0:10:2.77:0,3,42
chr10	93009953	.	CTCTCTCTGTGTG	C	4454.43	PASS	AB=0.966;AC=28;AF=0.519;AN=54;BaseQRankSum=8.420;DP=489;FS=2.325;HRun=0;HaplotypeScore=165.7801;InbreedingCoeff=-0.1389;MQ=47.87;MQ0=16;MQRankSum=-5.166;QD=11.88;ReadPosRankSum=2.790;VQSLOD=3.6387;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:39.61:0,40,957	0/1:14,0:14:94.33:94,0,282	0/0:6,0:3:9.03:0,9,209	./.	0/0:17,0:17:13.69:0,14,290	0/1:24,0:24:84.79:269,0,85	1/1:16,0:14:7.72:185,8,0	0/1:16,0:14:99:241,0,111	0/1:18,0:18:30.09:30,0,301	0/1:22,0:22:99:418,0,453	0/0:15,0:13:18.04:0,18,396	1/1:2,18:20:11.73:399,12,0	0/1:2,18:20:6.06:492,0,6	1/1:3,10:14:12.04:339,12,0	0/1:19,0:18:99:107,0,294	0/1:14,0:14:64.22:64,0,223	0/0:32,0:31:40.90:0,41,2510	0/1:20,0:19:41.85:42,0,507	0/1:15,0:13:99:288,0,175	0/1:22,0:22:99:129,0,242	0/0:12,0:9:2.87:0,3,60	1/1:6,15:21:4.78:141,5,0	1/1:7,13:20:8.97:206,9,0	0/1:10,0:9:73.96:163,0,74	1/1:4,18:22:5.28:123,5,0	0/1:10,0:10:99:238,0,218	0/1:25,0:25:99:385,0,495	1/1:12,0:10:6.02:100,6,0
chr10	93009957	.	CTCTGTGTGTGTG	C	4783.46	PASS	AB=0.946;AC=26;AF=0.464;AN=56;BaseQRankSum=7.458;DP=494;FS=0.000;HRun=0;HaplotypeScore=165.0148;InbreedingCoeff=0.0115;MQ=48.02;MQ0=16;MQRankSum=-5.053;QD=14.03;ReadPosRankSum=4.450;VQSLOD=3.2734;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:38.83:0,39,1002	0/0:14,0:14:23.08:0,23,563	0/0:7,0:4:12.04:0,12,431	0/0:7,0:1:3.01:0,3,85	0/1:9,8:17:21.09:21,0,87	0/1:22,0:22:49.55:50,0,294	0/1:16,0:14:30.24:30,0,160	0/1:16,0:14:61.80:283,0,62	0/1:18,0:18:87.18:87,0,134	0/1:22,0:22:77.15:1015,0,77	0/0:13,0:11:15:0,15,148	1/1:19,0:19:11.73:258,12,0	1/1:19,0:19:14.90:349,15,0	1/1:14,0:14:12.04:208,12,0	0/0:19,0:18:14.83:0,15,568	0/1:9,6:15:71.04:125,0,71	0/0:30,0:29:60.36:0,60,2837	0/0:21,0:20:25.95:0,26,870	0/1:18,0:13:31.88:531,0,32	0/1:25,0:25:62.24:272,0,62	0/0:16,0:13:2.82:0,3,20	1/1:20,0:20:4.78:72,5,0	1/1:20,0:19:8.95:102,9,0	0/1:10,0:9:29.90:30,0,52	1/1:22,0:22:5.24:56,5,0	0/1:11,0:11:41.17:458,0,41	0/1:24,1:25:99:812,0,101	1/1:12,0:10:5.52:25,6,0
chr10	93009959	.	CTGTGTGTGTG	C	4810.69	PASS	AB=0.728;AC=33;AF=0.589;AN=56;BaseQRankSum=5.809;DP=492;FS=4.269;HRun=0;HaplotypeScore=155.1004;InbreedingCoeff=0.4968;MQ=48.01;MQ0=15;MQRankSum=-4.946;QD=14.32;ReadPosRankSum=2.876;VQSLOD=3.6465;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:23.88:0,24,841	0/0:14,0:14:26.91:0,27,619	0/0:8,0:4:12.04:0,12,431	0/0:8,0:1:3.01:0,3,85	1/1:15,1:16:4.66:19,5,0	0/1:21,0:21:16.13:16,0,294	0/0:17,0:15:8.16:0,8,200	0/1:10,1:15:43.31:286,0,43	0/1:6,10:18:48.09:121,0,48	1/1:6,13:22:50.72:1234,51,0	0/0:8,4:11:2.22:0,2,7	1/1:19,0:19:11.25:149,11,0	1/1:19,0:19:13.78:206,14,0	1/1:14,0:14:11.92:124,12,0	0/0:18,0:18:26.37:0,26,625	1/1:11,1:15:8.39:142,8,0	0/0:31,0:30:75.25:0,75,2675	0/0:22,0:21:38.13:0,38,982	1/1:10,8:13:23.48:576,23,0	1/1:4,18:23:7.72:354,8,0	0/1:8,8:13:0:0,0,0	1/1:19,0:20:3.03:10,3,0	1/1:20,0:19:7.26:42,7,0	0/1:5,0:9:11.29:19,0,11	1/1:22,0:22:3.46:11,3,0	1/1:4,6:11:24.03:548,24,0	1/1:8,10:24:26.92:942,27,0	1/1:3,0:10:2.68:11,3,0
chr10	93010360	.	G	GACA	9170.69	PASS	AB=0.773;AC=20;AF=0.357;AN=56;BaseQRankSum=9.911;DP=674;FS=16.796;HRun=0;HaplotypeScore=105.1985;InbreedingCoeff=0.8390;MQ=69.45;MQ0=3;MQRankSum=0.577;QD=32.87;ReadPosRankSum=3.846;VQSLOD=4.0087;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:86.22:0,86,1161	0/0:13,0:13:32.89:0,33,391	0/0:32,0:26:50.96:0,51,551	0/0:29,0:22:37.78:0,38,438	0/0:8,0:8:18:0,18,224	1/1:2,16:18:30.10:630,30,0	1/1:6,20:27:39.13:801,39,0	0/1:24,0:24:99:183,0,257	0/0:30,0:30:77.68:0,78,896	0/0:12,0:12:27.04:0,27,345	0/0:12,0:12:33.06:0,33,451	1/1:3,28:35:56.75:1197,57,0	1/1:6,27:35:62.66:1320,63,0	1/1:3,28:34:63.22:1325,63,0	0/0:28,0:28:57:0,57,802	0/0:28,0:28:80.54:0,81,1024	0/0:29,0:29:72.19:0,72,981	0/0:24,0:24:66.11:0,66,881	0/0:23,0:22:33:0,33,383	0/0:11,0:11:29.99:0,30,379	0/0:39,0:39:93.07:0,93,1142	1/1:4,17:21:39.08:776,39,0	1/1:0,15:16:23.97:505,24,0	1/1:5,38:43:81.28:1705,81,0	0/1:3,14:18:18.01:475,0,18	0/0:22,0:22:51.06:0,51,663	0/0:23,0:22:59.86:0,60,776	1/1:3,5:8:12.04:253,12,0
chr10	93010369	.	A	AACC	5521.36	PASS	AB=0.958;AC=15;AF=0.268;AN=56;BaseQRankSum=14.519;DP=707;FS=15.641;HRun=0;HaplotypeScore=121.6569;InbreedingCoeff=0.4507;MQ=65.23;MQ0=7;MQRankSum=-0.552;QD=19.79;ReadPosRankSum=5.713;VQSLOD=3.7468;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:87.20:0,87,1154	0/0:14,0:14:30.09:0,30,405	0/0:47,0:28:56.74:0,57,649	0/0:38,0:27:47.23:0,47,619	0/0:11,0:11:21.04:0,21,261	1/1:18,0:18:8.18:358,8,0	0/1:26,0:26:23.61:446,0,24	0/1:15,11:26:5.73:453,0,6	0/0:31,0:31:72.20:0,72,965	0/0:14,0:14:29.99:0,30,342	0/0:13,0:13:39.11:0,39,522	0/1:39,0:39:7.56:670,0,8	1/1:33,0:33:41.62:771,42,0	1/1:33,0:33:27.35:777,27,0	0/0:27,0:27:60.17:0,60,802	0/0:28,0:28:66.21:0,66,917	0/0:28,0:30:72.15:0,72,950	0/0:23,0:23:63.19:0,63,879	0/0:20,0:18:24.07:0,24,311	0/0:14,0:14:33.08:0,33,431	0/0:37,0:37:84.18:0,84,1101	0/1:20,0:20:13.76:415,0,14	0/1:17,0:17:13.09:273,0,13	1/1:43,0:43:15.51:938,16,0	0/1:18,0:18:15.85:287,0,16	0/0:22,0:22:48.15:0,48,669	0/0:22,0:21:63.18:0,63,858	0/1:6,0:6:0.54:135,0,1
chr10	93013033	.	CA	C	901.77	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.972;DP=704;FS=12.764;HRun=4;HaplotypeScore=76.3620;InbreedingCoeff=0.9999;MQ=82.28;MQ0=0;MQRankSum=0.516;QD=31.10;ReadPosRankSum=-4.325;VQSLOD=1.1787;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,104,1432	0/0:13,0:13:39.13:0,39,544	0/0:25,0:25:65.23:0,65,865	0/0:18,0:18:45.57:0,46,596	0/0:35,0:35:99:0,102,1411	0/0:30,0:30:84.27:0,84,1158	0/0:29,0:29:78.26:0,78,1092	1/1:1,28:29:84.24:997,84,0	0/0:18,0:18:54.17:0,54,738	0/0:34,0:34:96.32:0,96,1337	0/0:21,0:21:57.18:0,57,780	0/0:29,0:29:72.24:0,72,1006	0/0:28,0:28:75.25:0,75,1048	0/0:23,0:23:60.20:0,60,839	0/0:29,0:29:87.28:0,87,1194	0/0:18,0:18:51.17:0,51,714	0/0:39,0:38:99:0,117,1603	0/0:28,0:28:78.22:0,78,1068	0/0:19,0:19:54.18:0,54,756	0/0:24,0:24:66.21:0,66,906	0/0:21,0:21:54.18:0,54,753	0/0:26,0:26:78.26:0,78,1088	0/0:19,0:19:54.17:0,54,730	0/0:32,0:32:75.25:0,75,1050	0/0:20,0:20:57.19:0,57,798	0/0:22,0:22:60.18:0,60,822	0/0:19,0:19:54.18:0,54,755	0/0:17,0:17:42.14:0,42,588
chr10	93013101	.	C	CA	9319.15	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-16.079;DP=748;FS=4.327;HRun=4;HaplotypeScore=73.6766;InbreedingCoeff=0.9992;MQ=70.33;MQ0=0;MQRankSum=-1.311;QD=33.52;ReadPosRankSum=0.030;VQSLOD=5.3676;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,1:46:76.33:0,76,1266	0/0:17,0:17:51.10:0,51,556	0/0:32,0:32:71.85:0,72,824	0/0:28,0:24:20.70:0,21,469	0/0:33,0:33:90.25:0,90,1014	1/1:3,34:37:90.30:1231,90,0	1/1:3,26:29:66.11:878,66,0	1/1:5,29:34:87.29:1186,87,0	0/0:17,0:17:42.12:0,42,476	0/0:31,0:31:81.22:0,81,911	0/0:25,0:25:69.19:0,69,779	1/1:1,22:23:51.17:698,51,0	1/1:3,22:25:63.19:843,63,0	1/1:0,13:13:30.10:410,30,0	0/0:28,0:28:72.20:0,72,816	0/0:16,0:16:45.13:0,45,510	0/0:37,0:37:99:0,108,1200	0/0:34,0:34:93.25:0,93,1045	0/0:31,0:31:81.20:0,81,893	0/0:30,0:30:90.24:0,90,1011	0/0:12,0:12:33.08:0,33,363	1/1:2,31:33:93.31:1271,93,0	1/1:1,15:16:39.13:530,39,0	1/1:1,27:28:45.14:916,45,0	1/1:1,20:21:51.17:698,51,0	0/0:29,0:29:78.21:0,78,873	0/0:23,0:23:69.20:0,69,780	1/1:0,19:19:48.16:656,48,0
chr10	93016220	.	T	TA	8209.34	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-17.057;DP=713;FS=16.229;HRun=7;HaplotypeScore=66.9610;InbreedingCoeff=0.9996;MQ=80.39;MQ0=0;MQRankSum=-0.411;QD=30.07;ReadPosRankSum=1.044;VQSLOD=3.6095;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:96.14:0,96,927	0/0:12,0:12:29.08:0,29,267	0/0:22,0:21:42.01:0,42,389	0/0:14,0:14:24.49:0,24,231	0/0:31,0:31:87.13:0,87,840	1/1:4,18:22:48.15:580,48,0	1/1:2,13:15:42.13:507,42,0	1/1:1,29:30:81.22:954,81,0	0/0:23,0:23:60.09:0,60,579	0/0:26,0:26:75.10:0,75,717	0/0:28,0:28:75.11:0,75,724	1/1:1,22:23:56.96:688,57,0	1/1:4,23:27:54.17:653,54,0	1/1:2,31:33:87.27:1051,87,0	0/0:22,0:22:66.08:0,66,626	0/0:26,0:26:63.09:0,63,608	0/0:40,0:40:99:0,111,1060	0/0:27,0:27:66.10:0,66,637	0/0:24,0:24:72.09:0,72,688	0/0:33,0:33:78.10:0,78,747	0/0:23,0:23:66.11:0,66,637	1/1:4,22:26:66.20:797,66,0	1/1:4,21:25:55.01:634,55,0	1/1:2,21:23:60.18:725,60,0	1/1:2,28:30:81.25:979,81,0	0/0:32,0:32:87.13:0,87,840	0/0:19,0:19:57.06:0,57,539	1/1:0,19:19:54.16:642,54,0
chr10	93017913	.	G	GA	4951.45	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=10.674;DP=644;FS=0.719;HRun=8;HaplotypeScore=69.6987;InbreedingCoeff=0.9937;MQ=77.65;MQ0=0;MQRankSum=-2.274;QD=25.92;ReadPosRankSum=1.221;VQSLOD=5.6077;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1085	0/0:8,0:8:23.97:0,24,211	0/0:29,0:25:43.36:0,43,386	0/0:21,0:20:38.94:0,39,343	0/0:16,0:16:45.02:0,45,412	1/1:2,16:18:42.12:485,42,0	1/1:1,20:21:59.91:670,60,0	0/0:28,0:28:71.97:0,72,639	0/0:29,0:29:80.13:0,80,732	0/0:23,0:23:63.03:0,63,576	0/0:24,0:24:60.03:0,60,549	1/1:3,13:16:11.65:388,12,0	1/1:3,11:15:29.92:324,30,0	1/1:2,17:19:39.12:450,39,0	0/0:30,0:30:81.04:0,81,741	0/0:32,0:32:90:0,90,807	0/0:31,0:31:90:0,90,811	0/0:12,0:12:30.01:0,30,275	0/0:14,0:13:36.01:0,36,326	0/0:28,0:28:81.04:0,81,741	0/0:17,0:17:48.03:0,48,439	1/1:2,16:18:20.60:462,21,0	1/1:2,19:21:48.61:555,49,0	1/1:6,17:23:54.15:615,54,0	1/1:2,23:25:60.18:691,60,0	0/0:30,0:30:78.02:0,78,710	0/0:39,0:39:99:0,111,1004	1/1:2,13:15:27.08:312,27,0
chr10	93019518	.	TA	T	792.09	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.990;DP=789;FS=7.998;HRun=4;HaplotypeScore=90.5608;InbreedingCoeff=0.9963;MQ=63.33;MQ0=1;MQRankSum=-0.407;QD=29.34;ReadPosRankSum=-4.629;VQSLOD=1.1666;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,166,2310	0/0:14,0:14:42.14:0,42,586	0/0:19,0:13:39.13:0,39,527	0/0:15,0:10:21.54:0,22,293	0/0:30,0:30:87.25:0,87,1193	0/0:22,0:22:63.20:0,63,865	0/0:25,0:25:72.19:0,72,955	1/1:2,25:26:75.22:887,75,0	0/0:28,0:28:81.22:0,81,1090	0/0:32,0:32:87.29:0,87,1216	0/0:29,0:29:78.26:0,78,1092	0/0:31,0:31:90.07:0,90,1189	0/0:36,0:36:99:0,102,1426	0/0:25,0:25:75.25:0,75,1048	0/0:30,0:30:87.29:0,87,1213	0/0:30,0:30:84.28:0,84,1174	0/0:29,0:29:72.17:0,72,949	0/0:23,0:23:69.23:0,69,965	0/0:18,0:18:54.14:0,54,709	0/0:40,0:40:99:0,117,1616	0/0:34,0:34:99:0,99,1350	0/0:28,0:28:81.23:0,81,1108	0/0:22,0:22:66.22:0,66,914	0/0:33,0:33:99:0,99,1383	0/0:27,0:27:69.23:0,69,966	0/0:26,0:26:78.24:0,78,1054	0/0:37,0:37:99:0,108,1478	0/0:21,0:21:63.21:0,63,878
chr10	93020417	.	T	TTTAAA	19025.71	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-8.176;DP=701;FS=3.029;HRun=0;HaplotypeScore=133.1286;InbreedingCoeff=0.9999;MQ=80.17;MQ0=0;MQRankSum=-12.298;QD=81.66;ReadPosRankSum=0.716;VQSLOD=6.9917;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.33:0,96,2182	0/0:12,0:12:36.12:0,36,838	0/0:23,0:23:62.99:0,63,1188	0/0:18,0:18:48.12:0,48,955	0/0:20,0:20:54.15:0,54,1167	1/1:2,19:24:57.20:1874,57,0	1/1:4,16:23:57.20:1780,57,0	0/0:34,0:33:96.30:0,96,1981	0/0:30,0:30:84.29:0,84,1952	0/0:37,0:37:99:0,99,2240	0/0:15,0:15:42.14:0,42,956	1/1:1,22:23:69.24:2270,69,0	1/1:8,25:35:87.30:2760,87,0	1/1:2,14:16:45.15:1456,45,0	0/0:27,0:27:78.27:0,78,1763	0/0:32,0:32:96.33:0,96,2201	0/0:32,0:32:96.31:0,96,2180	0/0:27,0:27:81.28:0,81,1839	0/0:21,0:21:60.21:0,60,1305	0/0:22,0:22:63.18:0,63,1346	0/0:19,0:19:57.20:0,57,1328	1/1:3,18:26:69.19:1953,69,0	1/1:4,21:29:66.23:2066,66,0	1/1:0,12:15:38.72:1207,39,0	1/1:3,23:28:78.27:2483,78,0	0/0:29,0:29:84.29:0,84,1944	0/0:37,0:37:99:0,108,2423	1/1:0,13:14:36.12:1176,36,0
chr10	93020630	.	CG	C	6699.61	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.446;DP=711;FS=2.578;HRun=6;HaplotypeScore=72.9952;InbreedingCoeff=0.9996;MQ=80.52;MQ0=0;MQRankSum=-1.729;QD=28.39;ReadPosRankSum=4.953;VQSLOD=5.3976;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,117,1435	0/0:11,0:11:27.04:0,27,321	0/0:18,0:18:39.08:0,39,469	0/0:20,0:20:42.03:0,42,450	0/0:23,0:23:63.20:0,63,817	1/1:2,16:18:42.10:451,42,0	1/1:4,30:34:84.21:903,84,0	0/0:37,0:37:96.30:0,96,1236	0/0:23,0:23:69.21:0,69,889	0/0:17,0:17:51.16:0,51,657	0/0:13,0:13:27.08:0,27,341	1/1:2,29:31:84.21:899,84,0	1/1:0,23:23:63.16:676,63,0	1/1:1,29:30:81.20:870,81,0	0/0:35,0:35:99:0,99,1300	0/0:31,0:31:87.27:0,87,1128	0/0:35,0:35:99:0,99,1301	0/0:18,0:18:54.18:0,54,708	0/0:18,0:18:48.13:0,48,591	0/0:23,0:23:42.12:0,42,536	0/0:53,0:53:99:0,150,1954	1/1:2,16:18:39.10:418,39,0	1/1:0,16:16:45.11:484,45,0	1/1:0,34:34:99:1064,99,0	1/1:1,19:20:54.14:580,54,0	0/0:39,0:39:99:0,99,1242	0/0:17,0:16:48.10:0,48,597	1/1:1,11:12:33.08:355,33,0
chr10	93022469	.	AGTGTGTGT	A	6170.41	PASS	AB=0.818;AC=19;AF=0.339;AN=56;BaseQRankSum=11.968;DP=663;FS=16.356;HRun=0;HaplotypeScore=200.8341;InbreedingCoeff=0.8726;MQ=61.89;MQ0=11;MQRankSum=-11.010;QD=29.38;ReadPosRankSum=3.831;VQSLOD=3.0438;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:53:84.29:0,84,2584	0/0:5,0:5:9.03:0,9,234	0/0:34,0:16:6.02:0,6,107	0/0:31,0:17:9.03:0,9,159	0/0:23,0:23:27.05:0,27,852	1/1:14,7:21:21.54:430,22,0	0/1:14,3:18:4.88:270,0,5	0/0:29,0:31:25.41:0,25,352	0/0:20,0:20:35.83:0,36,1194	0/0:25,0:24:36.12:0,36,1008	0/0:7,0:7:5.34:0,5,248	1/1:9,19:30:54.18:1319,54,0	1/1:16,10:29:45.15:978,45,0	1/1:14,14:30:51.17:1137,51,0	0/0:19,0:25:57.18:0,57,1973	0/0:18,0:18:36.12:0,36,1026	0/0:24,0:26:51.16:0,51,1819	0/0:21,0:25:48.12:0,48,1563	0/0:18,0:18:30.10:0,30,743	0/0:19,0:21:39.10:0,39,1295	0/0:34,0:34:39.12:0,39,1007	1/1:10,14:23:21.07:519,21,0	1/1:9,9:18:30.08:686,30,0	1/1:16,5:20:14.96:337,15,0	1/1:6,4:10:12.04:302,12,0	0/0:30,0:31:60.21:0,60,1951	0/0:20,0:21:35.76:0,36,993	1/1:5,2:8:9.03:193,9,0
chr10	93022519	.	ATG	A	713.37	PASS	AB=0.983;AC=20;AF=0.357;AN=56;BaseQRankSum=12.306;DP=742;FS=4.716;HRun=0;HaplotypeScore=217.8115;InbreedingCoeff=0.7509;MQ=51.22;MQ0=16;MQRankSum=1.614;QD=2.74;ReadPosRankSum=1.189;VQSLOD=2.6044;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,113,1753	0/0:5,0:5:15.05:0,15,246	0/0:64,0:23:28.28:0,28,387	0/0:76,0:19:24.60:0,25,296	0/0:19,0:19:6.23:0,6,60	1/1:18,3:21:19.50:103,20,0	1/1:24,0:24:16.14:81,16,0	0/0:26,0:26:78.13:0,78,1185	0/0:24,0:24:8.95:0,9,256	0/0:23,0:22:15.05:0,15,397	0/0:10,0:9:0.17:0,0,40	1/1:30,6:36:20.80:153,21,0	1/1:16,3:19:22.07:128,22,0	1/1:34,3:37:20.68:113,21,0	0/0:27,0:27:60.15:0,60,885	0/1:20,0:18:15.26:15,0,240	0/0:32,0:32:72.61:0,73,1118	0/0:22,0:22:62.67:0,63,952	0/0:14,1:13:18.17:0,18,311	0/0:21,0:21:5.24:0,5,203	0/0:27,0:26:17.49:0,17,249	0/1:27,1:27:13.49:54,0,13	1/1:15,6:21:9.57:43,10,0	1/1:24,3:27:23.72:78,24,0	1/1:18,0:18:24.66:87,25,0	0/0:25,0:24:38.94:0,39,508	0/0:19,0:18:33.60:0,34,385	1/1:8,1:9:13.05:65,13,0
chr10	93022530	.	T	TGA	6348.18	PASS	AB=0.954;AC=25;AF=0.446;AN=56;BaseQRankSum=11.494;DP=741;FS=0.000;HRun=0;HaplotypeScore=195.8219;InbreedingCoeff=0.5260;MQ=58.14;MQ0=14;MQRankSum=-2.160;QD=17.06;ReadPosRankSum=6.280;VQSLOD=4.1857;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,114,1716	0/0:7,0:7:18.04:0,18,253	0/0:60,0:24:39.15:0,39,516	0/0:72,0:26:12.70:0,13,360	0/0:17,0:17:7.51:0,8,73	1/1:6,14:21:19.13:526,19,0	1/1:2,26:28:35.67:775,36,0	0/0:33,0:33:99:0,99,1332	0/1:22,0:22:6.22:6,0,264	0/1:23,0:22:9.62:10,0,371	0/1:11,0:10:12.47:12,0,37	1/1:16,19:35:35.05:603,35,0	1/1:7,10:17:31.42:456,31,0	1/1:9,30:39:66.14:1206,66,0	0/0:25,0:25:65.85:0,66,890	0/1:22,0:20:4.64:5,0,234	0/0:28,0:28:78.12:0,78,1125	0/0:23,0:23:69.13:0,69,955	0/0:12,0:10:3.29:0,3,257	0/1:20,0:20:12:12,0,207	0/0:31,0:30:26.90:0,27,329	0/1:13,12:24:2.74:648,0,3	1/1:12,12:25:21.85:455,22,0	1/1:7,23:32:33.37:634,33,0	1/1:0,16:17:33.11:634,33,0	0/1:25,0:24:56.43:56,0,424	0/0:18,0:17:20.51:0,21,414	1/1:3,7:10:20.45:309,20,0
chr10	93022532	.	TGA	T	977.79	PASS	AB=0.938;AC=22;AF=0.393;AN=56;BaseQRankSum=8.196;DP=732;FS=2.768;HRun=0;HaplotypeScore=205.5694;InbreedingCoeff=-0.2642;MQ=58.69;MQ0=12;MQRankSum=2.471;QD=2.00;ReadPosRankSum=1.124;VQSLOD=2.4959;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:85:0,85,1721	0/0:7,0:7:21.03:0,21,304	0/0:58,0:24:1.52:0,2,354	0/1:69,0:27:39.72:40,0,259	0/1:13,2:15:17.13:17,0,21	0/1:21,0:21:2.73:3,0,26	0/1:27,0:27:6.53:7,0,15	0/0:34,0:34:87.52:0,88,1141	0/1:17,3:20:48.55:49,0,111	0/1:19,3:21:99:164,0,174	0/1:6,5:10:5.81:23,0,6	0/1:34,0:34:15.66:34,0,16	0/1:16,0:16:0.07:50,0,0	0/1:36,0:36:2.73:3,0,38	0/0:24,0:24:56.69:0,57,911	0/1:19,3:20:88.23:98,0,88	0/0:27,0:27:74.21:0,74,1095	0/0:24,0:24:55.12:0,55,1074	0/1:12,1:11:65.97:66,0,177	0/1:16,3:19:74.23:74,0,107	0/1:32,0:31:99:111,0,111	0/1:25,0:24:23.86:58,0,24	0/0:25,0:25:0.99:0,1,15	1/1:35,0:35:8.55:92,9,0	1/1:17,0:17:7.03:17,7,0	0/1:24,3:26:99:216,0,217	0/1:18,0:17:1.12:1,0,201	0/1:10,0:10:8.41:8,0,12
chr10	93022906	.	CCACACA	C	7985.37	PASS	AB=0.558;AC=25;AF=0.446;AN=56;BaseQRankSum=3.208;DP=652;FS=3.968;HRun=0;HaplotypeScore=168.1336;InbreedingCoeff=0.8759;MQ=65.33;MQ0=5;MQRankSum=-13.051;QD=32.86;ReadPosRankSum=1.500;VQSLOD=4.8064;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,123,3861	0/0:9,0:9:21.07:0,21,711	0/0:49,0:33:72.24:0,72,2105	0/0:37,0:29:63.18:0,63,1853	1/1:4,19:23:36.12:785,36,0	1/1:6,0:18:5.07:13,5,0	0/1:6,0:29:13.66:14,0,34	0/0:11,0:34:86.29:0,86,1173	1/1:4,17:21:51.18:1112,51,0	1/1:2,21:23:60.19:1267,60,0	1/1:0,9:10:27.09:557,27,0	0/0:5,0:17:36.12:0,36,499	0/0:3,0:17:48.16:0,48,630	0/0:4,0:28:69.22:0,69,959	0/0:34,0:35:93.32:0,93,3027	1/1:0,18:18:39.13:818,39,0	0/0:26,0:27:72.25:0,72,2371	0/0:16,0:18:33.85:0,34,1253	1/1:7,11:18:36.10:733,36,0	1/1:2,12:14:21.07:449,21,0	1/1:11,8:19:6.49:133,6,0	0/0:4,0:14:30.10:0,30,398	0/0:6,0:21:48.15:0,48,662	0/0:6,0:34:84.27:0,84,1137	0/0:4,0:19:36.11:0,36,457	1/1:2,23:25:69.19:1377,69,0	1/1:1,17:17:33.11:720,33,0	1/1:0,0:7:2.83:8,3,0
chr10	93024338	.	CTTCTGTGACAACCTCTT	C	24051.20	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=19.252;DP=795;FS=3.615;HRun=0;HaplotypeScore=379.2934;InbreedingCoeff=0.9913;MQ=63.18;MQ0=0;MQRankSum=-17.975;QD=97.37;ReadPosRankSum=2.911;VQSLOD=3.9799;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,178,12822	0/0:21,0:21:60.17:0,60,4224	0/0:33,0:33:93.25:0,93,4863	0/0:24,0:25:62.97:0,63,2915	1/1:7,25:32:72.24:2712,72,0	0/0:25,0:25:72.23:0,72,5003	0/0:28,0:28:84.29:0,84,6111	0/0:35,0:35:99:0,99,6938	1/1:2,19:21:51.18:2512,51,0	1/1:5,23:28:69.21:3034,69,0	1/1:5,16:21:33.11:1328,33,0	0/0:30,0:30:90.28:0,90,6497	0/0:28,0:28:84.27:0,84,6216	0/0:40,0:40:99:0,117,8436	0/0:30,0:30:90.29:0,90,6955	1/1:4,21:25:60.21:2955,60,0	0/0:31,0:31:87.30:0,87,6313	0/0:23,0:23:63.22:0,63,4697	1/1:10,3:12:9.03:443,9,0	1/1:3,19:22:54.18:2440,54,0	1/1:9,16:25:33.11:1368,33,0	0/0:18,0:18:54.17:0,54,3872	0/0:34,0:34:99:0,99,7592	0/0:30,0:30:87.28:0,87,6376	0/0:32,0:32:93.32:0,93,6672	1/1:3,19:22:57.20:2533,57,0	1/1:4,34:38:96.33:4727,96,0	0/0:23,0:23:63.22:0,63,4886
chr10	93025480	.	TTC	T	11687.04	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=8.831;DP=666;FS=3.324;HRun=0;HaplotypeScore=102.3199;InbreedingCoeff=0.9785;MQ=67.39;MQ0=8;MQRankSum=-4.125;QD=25.80;ReadPosRankSum=3.051;VQSLOD=6.1359;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:72.24:0,72,1125	0/0:14,0:14:30.09:0,30,460	0/0:35,1:29:17.39:0,17,693	0/0:32,0:24:16.76:0,17,297	1/1:4,12:17:32.93:371,33,0	1/1:5,15:20:51.16:623,51,0	1/1:9,17:26:63.20:769,63,0	0/0:20,0:20:24.07:0,24,361	1/1:4,19:22:42.13:513,42,0	1/1:4,19:22:51.16:623,51,0	1/1:5,18:23:51.12:607,51,0	1/1:7,16:23:54.17:660,54,0	1/1:7,20:27:66.19:794,66,0	1/1:9,18:27:57.17:684,57,0	0/0:26,0:26:63.21:0,63,1014	1/1:4,19:22:45.14:550,45,0	0/0:22,0:22:63.22:0,63,1019	0/0:30,2:32:35.54:0,36,1056	1/1:12,2:14:6.02:73,6,0	1/1:6,19:25:57.17:684,57,0	1/1:6,20:26:48.15:587,48,0	1/1:9,13:23:44.96:514,45,0	1/1:5,11:16:39.12:477,39,0	1/1:8,23:30:75.07:891,75,0	1/1:5,8:13:27.08:329,27,0	1/1:4,22:26:60.19:732,60,0	1/1:8,24:31:69.22:841,69,0	1/1:4,10:14:30.09:367,30,0
chr10	93025541	.	CA	C	8484.73	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=11.298;DP=726;FS=0.937;HRun=2;HaplotypeScore=125.2263;InbreedingCoeff=0.9998;MQ=88.28;MQ0=1;MQRankSum=-3.582;QD=35.06;ReadPosRankSum=4.967;VQSLOD=4.2396;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1525	0/0:13,0:13:36.09:0,36,498	0/0:31,0:31:88.73:0,89,1180	0/0:32,0:32:58.28:0,58,1044	0/0:15,0:15:36.08:0,36,501	1/1:1,14:15:42.14:544,42,0	1/1:1,29:30:78.25:1010,78,0	0/0:31,0:31:84.26:0,84,1207	0/0:33,0:32:90.27:0,90,1318	0/0:20,0:20:57.17:0,57,822	0/0:18,0:18:48.16:0,48,706	1/1:1,27:28:75.24:965,75,0	1/1:0,30:30:81.26:1043,81,0	1/1:0,26:26:78.25:1005,78,0	0/0:24,0:24:72.23:0,72,1057	0/0:22,0:22:63.14:0,63,867	0/0:33,0:33:99:0,99,1440	0/0:36,0:36:99:0,105,1514	0/0:25,0:25:72.20:0,72,1019	0/0:32,0:32:90.27:0,90,1314	0/0:23,0:23:66.14:0,66,936	1/1:2,12:14:26.88:345,27,0	1/1:0,16:16:45.15:583,45,0	1/1:0,41:41:99:1357,105,0	1/1:0,20:20:60.20:777,60,0	0/0:25,0:25:72.24:0,72,1061	0/0:36,0:36:99:0,105,1491	1/1:0,22:22:66.21:856,66,0
chr10	93025610	.	TA	T	3902.57	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=17.238;DP=682;FS=1.117;HRun=1;HaplotypeScore=139.5589;InbreedingCoeff=0.9471;MQ=81.91;MQ0=0;MQRankSum=-15.038;QD=19.91;ReadPosRankSum=0.180;VQSLOD=3.7040;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1768	0/0:12,0:12:36.12:0,36,575	0/0:22,0:22:63.21:0,63,988	0/0:25,1:26:36.31:0,36,909	1/1:3,16:19:3:25,3,0	0/0:10,0:10:30.09:0,30,455	0/0:34,0:34:96.31:0,96,1502	0/0:26,0:26:75.25:0,75,1175	1/1:4,20:24:72.01:664,72,0	1/1:0,30:30:90.02:840,90,0	1/1:0,13:13:3:25,3,0	0/0:47,0:47:99:0,135,2096	0/0:36,0:36:96.31:0,96,1493	0/0:36,0:36:99:0,108,1684	0/0:32,0:32:96.29:0,96,1458	1/1:1,17:17:48:425,48,0	0/0:38,0:38:99:0,114,1813	0/0:25,0:25:75.26:0,75,1193	1/1:0,10:10:30.03:283,30,0	1/1:0,21:21:35.90:304,36,0	1/1:2,20:22:38.95:333,39,0	0/0:15,0:15:39.13:0,39,623	0/0:14,0:14:39.13:0,39,607	0/0:44,0:44:99:0,123,1949	0/0:16,0:16:48.16:0,48,767	1/1:0,21:21:63.03:591,63,0	1/1:0,18:18:47.91:413,48,0	0/0:15,0:15:39.13:0,39,623
chr10	93025613	.	AC	A	1068.77	PASS	AC=18;AF=0.333;AN=54;BaseQRankSum=17.580;DP=662;FS=1.159;HRun=1;HaplotypeScore=143.3341;InbreedingCoeff=0.9709;MQ=81.93;MQ0=0;MQRankSum=-15.722;QD=6.11;ReadPosRankSum=0.485;VQSLOD=0.4458;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1737	0/0:12,0:12:36.11:0,36,552	0/0:20,0:20:60.20:0,60,959	0/0:27,0:27:65.08:0,65,963	./.	0/0:10,0:10:30.10:0,30,471	0/0:34,0:34:99:0,99,1551	0/0:23,0:23:66.22:0,66,1028	1/1:1,20:21:51.53:186,52,0	1/1:2,28:30:74.88:301,75,0	1/1:0,13:13:2.37:8,2,0	0/0:45,0:45:99:0,129,2034	0/0:35,0:35:93.32:0,93,1478	0/0:34,0:34:99:0,102,1622	0/0:30,0:30:90.25:0,90,1409	1/1:3,17:19:40.47:147,40,0	0/0:37,0:37:99:0,111,1746	0/0:26,0:26:78.24:0,78,1221	1/1:0,10:10:26.70:108,27,0	1/1:2,19:21:26.14:95,26,0	1/1:1,21:22:27.11:100,27,0	0/0:14,0:14:36.11:0,36,552	0/0:13,0:13:33.11:0,33,522	0/0:42,0:42:99:0,117,1862	0/0:17,0:17:51.15:0,51,783	1/1:3,16:19:46.59:181,47,0	1/1:1,18:19:40.43:149,40,0	0/0:13,0:13:39.07:0,39,528
chr10	93025615	.	TAA	T	2167.06	PASS	AC=18;AF=0.333;AN=54;BaseQRankSum=17.682;DP=664;FS=1.139;HRun=2;HaplotypeScore=149.0490;InbreedingCoeff=0.9715;MQ=81.58;MQ0=0;MQRankSum=-15.864;QD=12.24;ReadPosRankSum=-0.126;VQSLOD=0.4913;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,2174	0/0:11,0:11:33.11:0,33,671	0/0:20,0:20:60.21:0,60,1214	0/0:27,0:26:57.69:0,58,1138	./.	0/0:11,0:11:33.11:0,33,670	0/0:36,0:36:99:0,105,2122	0/0:23,0:23:66.23:0,66,1337	1/1:0,20:20:58.49:349,58,0	1/1:2,28:30:85.11:509,85,0	1/1:0,13:13:2.90:16,3,0	0/0:44,0:44:99:0,126,2559	0/0:36,0:36:96.33:0,96,1928	0/0:34,0:34:99:0,102,2063	0/0:29,0:29:87.30:0,87,1759	1/1:3,17:19:48.33:281,48,0	0/0:38,0:38:99:0,114,2314	0/0:28,0:28:84.25:0,84,1649	1/1:2,10:12:31.81:196,32,0	1/1:3,19:22:34.55:198,35,0	1/1:1,21:22:35.78:200,36,0	0/0:15,0:15:39.13:0,39,754	0/0:12,0:12:33.11:0,33,670	0/0:42,0:42:99:0,117,2361	0/0:17,0:17:51.17:0,51,1024	1/1:3,16:19:52.20:314,52,0	1/1:0,18:19:49.31:310,49,0	0/0:9,0:9:27.09:0,27,549
chr10	93025928	.	AT	A	14039.17	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=13.815;DP=607;FS=8.302;HRun=2;HaplotypeScore=71.7403;InbreedingCoeff=0.9947;MQ=83.33;MQ0=0;MQRankSum=-3.981;QD=34.66;ReadPosRankSum=5.343;VQSLOD=4.8735;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1570	0/0:4,0:4:12.04:0,12,179	0/0:25,0:25:62.98:0,63,875	0/0:20,0:20:54.18:0,54,773	1/1:0,17:17:42.03:504,42,0	1/1:0,20:20:54.18:701,54,0	1/1:0,15:15:39.13:506,39,0	0/0:33,0:33:87.29:0,87,1304	1/1:0,13:13:39.13:506,39,0	1/1:1,23:24:66.17:837,66,0	1/1:0,12:12:36.12:465,36,0	1/1:0,23:23:63.20:818,63,0	1/1:0,18:18:48.16:623,48,0	1/1:0,19:19:57.19:740,57,0	0/0:25,0:25:72.21:0,72,1023	1/1:0,27:27:66.21:857,66,0	0/0:27,0:27:78.25:0,78,1145	0/0:32,0:32:96.31:0,96,1418	1/1:1,18:19:54.14:670,54,0	1/1:2,17:19:42.14:543,42,0	1/1:1,26:27:66.21:857,66,0	1/1:0,16:16:45.15:584,45,0	1/1:0,12:12:33.11:428,33,0	1/1:0,40:40:99:1362,105,0	1/1:0,21:21:63.20:818,63,0	1/1:1,20:21:54.18:701,54,0	1/1:0,27:27:75.05:973,75,0	1/1:0,15:15:42.14:545,42,0
chr10	93026549	.	C	CT	1907.67	PASS	AC=36;AF=0.692;AN=52;BaseQRankSum=1.350;DP=295;FS=2.532;HRun=10;HaplotypeScore=45.1927;InbreedingCoeff=0.7938;MQ=68.41;MQ0=4;MQRankSum=-2.896;QD=13.43;ReadPosRankSum=1.272;VQSLOD=3.2710;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:47.89:0,48,388	0/0:7,0:7:17.91:0,18,138	0/0:19,0:8:9.25:0,9,88	0/0:20,0:11:11.46:0,11,53	1/1:2,1:7:14.50:95,14,0	1/1:0,16:16:39.10:416,39,0	1/1:1,4:6:12.03:128,12,0	0/0:33,0:33:80.64:0,81,651	1/1:1,0:5:11.36:57,11,0	1/1:3,0:6:11.36:57,11,0	1/1:2,0:7:17.45:107,17,0	1/1:2,6:8:12.03:128,12,0	1/1:1,4:4:6.02:64,6,0	1/1:1,2:3:3.01:32,3,0	0/0:4,0:4:8.98:0,9,74	1/1:4,0:7:8.52:43,9,0	0/0:27,0:29:74.04:0,74,559	0/0:13,0:13:32.92:0,33,266	1/1:9,0:9:2.84:14,3,0	1/1:0,0:1:2.84:14,3,0	1/1:2,0:5:8.64:47,9,0	./.	./.	1/1:0,2:2:3.01:32,3,0	1/1:2,8:10:24.06:256,24,0	1/1:12,1:16:29.44:213,29,0	1/1:6,1:15:37.61:234,38,0	1/1:2,7:9:15.04:160,15,0
chr10	93026564	.	A	AT	1414.68	PASS	AC=20;AF=0.385;AN=52;BaseQRankSum=1.403;DP=285;FS=2.028;HRun=9;HaplotypeScore=46.7762;InbreedingCoeff=0.8888;MQ=68.12;MQ0=4;MQRankSum=-1.742;QD=18.86;ReadPosRankSum=-3.810;VQSLOD=2.4277;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:47.99:0,48,417	0/0:3,0:3:9:0,9,78	0/0:20,0:8:16.80:0,17,108	0/0:20,1:10:11.58:0,12,91	1/1:0,6:6:15.04:162,15,0	0/0:15,0:15:35.99:0,36,312	0/0:6,0:6:18:0,18,156	0/0:34,0:35:83.91:0,84,719	1/1:3,3:6:14.53:142,15,0	1/1:2,7:8:21.53:233,22,0	1/1:2,5:7:15.03:158,15,0	0/0:8,0:8:17.66:0,18,156	0/0:4,0:3:6:0,6,52	0/0:4,0:4:5.67:0,6,52	0/0:8,0:8:24:0,24,208	1/1:1,3:4:9.02:98,9,0	0/0:33,0:32:77.94:0,78,671	0/0:12,0:12:23.97:0,24,208	1/1:7,4:10:17.85:168,18,0	1/1:0,3:3:8.98:83,9,0	1/1:1,1:2:6.02:66,6,0	./.	./.	0/0:3,0:3:9:0,9,78	0/0:10,0:10:29.99:0,30,260	1/1:5,7:10:21.06:232,21,0	1/1:7,7:14:27.04:274,27,0	0/0:6,0:6:12:0,12,104
chr10	93026746	.	G	GC	866.46	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.747;DP=539;FS=0.799;HRun=5;HaplotypeScore=59.7050;InbreedingCoeff=0.9880;MQ=66.40;MQ0=14;MQRankSum=-1.871;QD=24.76;ReadPosRankSum=-3.186;VQSLOD=1.6629;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:38:81.20:0,81,870	0/0:12,0:11:27.07:0,27,290	0/0:12,0:11:32.07:0,32,311	0/0:17,0:15:36.05:0,36,373	0/0:15,0:14:39.10:0,39,419	0/0:15,0:15:42.11:0,42,451	0/0:21,0:18:50.86:0,51,512	1/1:9,26:33:75.11:961,75,0	0/0:11,0:10:27.07:0,27,290	0/0:14,0:14:39.06:0,39,407	0/0:13,0:12:36.09:0,36,387	0/0:19,0:19:48.10:0,48,508	0/0:20,0:19:42.10:0,42,451	0/0:23,0:23:54.14:0,54,580	0/0:21,0:20:51.11:0,51,540	0/0:19,0:19:48.12:0,48,516	0/0:26,0:24:54.13:0,54,580	0/0:21,0:19:45.11:0,45,483	0/0:16,0:15:41.93:0,42,426	0/0:8,0:8:21.05:0,21,226	0/0:38,0:33:87.22:0,87,933	0/0:10,0:9:27.07:0,27,290	0/0:7,0:7:21.05:0,21,226	0/0:34,0:31:66.12:0,66,697	0/0:15,0:14:36.09:0,36,386	0/0:18,0:18:48.12:0,48,516	0/0:19,0:19:54.12:0,54,572	0/0:20,0:20:56.63:0,57,603
chr10	93027628	.	C	CT	15615.48	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=17.971;DP=568;FS=2.391;HRun=1;HaplotypeScore=238.3590;InbreedingCoeff=0.9827;MQ=77.15;MQ0=0;MQRankSum=-17.304;QD=40.99;ReadPosRankSum=5.292;VQSLOD=3.9727;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:23:63.21:942,63,0	0/0:13,0:13:39.10:0,39,524	0/0:21,0:21:54.04:0,54,657	0/0:21,0:21:56.99:0,57,680	1/1:0,26:26:69.23:1035,69,0	1/1:2,14:16:48.15:693,48,0	1/1:0,19:19:57.19:853,57,0	0/0:26,0:26:72.03:0,72,992	1/1:0,20:20:54.18:807,54,0	1/1:0,21:22:66.17:944,66,0	1/1:0,19:19:54.16:807,54,0	1/1:0,26:26:78.26:1160,78,0	1/1:0,20:21:63.21:942,63,0	1/1:0,23:23:69.23:1035,69,0	0/0:35,0:35:99:0,105,1468	1/1:3,20:23:69.22:1006,69,0	0/0:44,0:44:99:0,129,1795	0/0:27,0:27:81.24:0,81,1110	1/1:1,8:9:27.07:368,27,0	1/1:0,13:13:36.12:539,36,0	1/1:0,17:17:12.78:294,13,0	1/1:1,20:21:57.18:837,57,0	1/1:0,7:11:18.06:271,18,0	1/1:1,9:10:24.08:360,24,0	1/1:0,18:18:54.18:810,54,0	1/1:0,21:21:63.21:923,63,0	1/1:0,19:19:57.19:854,57,0	1/1:0,3:3:9.03:136,9,0
chr10	93027638	.	G	GC	14331.78	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=18.767;DP=564;FS=1.446;HRun=0;HaplotypeScore=240.1101;InbreedingCoeff=0.9855;MQ=83.29;MQ0=0;MQRankSum=-18.443;QD=39.59;ReadPosRankSum=7.336;VQSLOD=3.3686;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:21:57.08:811,57,0	0/0:13,0:13:39.13:0,39,544	0/0:24,0:25:72.17:0,72,919	0/0:26,0:26:69.21:0,69,943	1/1:1,25:26:60.27:905,60,0	1/1:0,14:14:42.14:611,42,0	1/1:0,20:20:57.18:826,57,0	0/0:26,0:26:73.48:0,73,996	1/1:1,17:18:51.17:755,51,0	1/1:0,19:19:57.19:826,57,0	1/1:0,19:19:51.14:750,51,0	1/1:1,26:27:81.27:1186,81,0	1/1:2,20:22:57.11:821,57,0	1/1:0,23:23:69.23:1014,69,0	0/0:37,0:37:99:0,111,1498	1/1:1,20:21:60.20:868,60,0	0/0:47,0:47:99:0,138,1911	0/0:28,0:28:84.24:0,84,1150	1/1:3,8:11:23.85:350,24,0	1/1:0,12:13:38.99:509,39,0	1/1:1,11:12:15.53:288,16,0	1/1:0,20:20:59.86:820,60,0	1/1:0,7:7:20.90:281,21,0	1/1:1,12:13:27.09:393,27,0	1/1:1,15:16:42.14:607,42,0	1/1:0,18:18:54.18:800,54,0	1/1:0,18:18:54.18:780,54,0	1/1:0,3:3:9.03:133,9,0
chr10	93029114	.	GTT	G	739.99	PASS	AB=0.922;AC=17;AF=0.304;AN=56;BaseQRankSum=-0.349;DP=393;FS=1.453;HRun=12;HaplotypeScore=79.4057;InbreedingCoeff=0.7087;MQ=86.03;MQ0=6;MQRankSum=-0.589;QD=7.40;ReadPosRankSum=2.933;VQSLOD=0.6095;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:18:23.57:0,24,321	0/0:4,0:5:14.52:0,15,167	0/0:34,1:26:26.75:0,27,558	0/1:30,1:25:4.21:4,0,273	0/0:21,0:21:49.21:0,49,556	0/0:12,0:11:20.95:0,21,227	0/0:12,0:12:32.86:0,33,416	0/0:22,0:22:51.09:0,51,685	0/0:6,0:6:18.02:0,18,243	0/0:26,0:26:60.15:0,60,818	0/1:7,1:8:9.49:9,0,222	1/1:2,4:6:8.78:91,9,0	1/1:2,5:7:15.02:152,15,0	1/1:1,6:7:15.03:153,15,0	0/0:13,0:13:33.11:0,33,490	0/0:7,0:7:10.50:0,10,73	0/0:19,0:21:44.61:0,45,579	0/0:23,0:23:60.14:0,60,813	0/0:16,0:16:26.58:0,27,368	0/0:8,0:9:17.47:0,17,183	0/0:8,0:8:15.01:0,15,198	1/1:1,3:4:9.02:92,9,0	1/1:3,3:7:5.75:112,6,0	1/1:2,5:7:12.02:121,12,0	1/1:5,8:12:18.03:183,18,0	0/0:26,0:26:63.04:0,63,813	0/1:9,1:10:9.55:10,0,160	0/0:7,0:7:12.03:0,12,159
chr10	93029139	.	C	CTTTTTT	7466.50	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=3.812;DP=399;FS=12.982;HRun=16;HaplotypeScore=116.7882;InbreedingCoeff=0.6648;MQ=64.00;MQ0=12;MQRankSum=-7.067;QD=23.63;ReadPosRankSum=-3.741;VQSLOD=-0.0036;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,8:20:13.80:193,14,0	0/0:5,0:5:5.91:0,6,96	0/1:22,0:15:5.65:6,0,39	0/0:22,0:15:1.44:0,1,4	1/1:21,0:17:23.14:311,23,0	1/1:13,0:14:24.08:481,24,0	1/1:9,0:11:21.06:426,21,0	1/1:31,0:29:31.31:586,31,0	1/1:5,0:5:9.50:172,10,0	1/1:23,0:22:32.97:411,33,0	1/1:15,0:12:15.87:253,16,0	1/1:5,0:5:8.38:118,8,0	1/1:6,1:7:18.03:317,18,0	1/1:7,0:8:15.05:401,15,0	0/0:12,0:13:7.07:0,7,249	1/1:7,0:7:14.91:187,15,0	0/0:18,0:18:27.72:0,28,486	0/0:21,0:23:29.31:0,29,456	1/1:18,0:16:30.03:577,30,0	1/1:11,0:11:17.24:310,17,0	1/1:6,0:6:15.04:265,15,0	1/1:6,0:6:12.04:293,12,0	1/1:5,0:7:12.18:231,12,0	1/1:8,3:10:18.06:474,18,0	1/1:16,0:15:18.06:418,18,0	1/1:34,0:31:47.28:725,47,0	1/1:10,0:8:15.01:270,15,0	0/1:4,0:3:26.33:41,0,26
chr10	93029723	.	TC	T	767.69	PASS	AB=1.000;AC=31;AF=0.646;AN=48;BaseQRankSum=-5.612;DP=205;FS=0.000;HRun=1;HaplotypeScore=25.1062;InbreedingCoeff=0.2449;MQ=21.91;MQ0=55;MQRankSum=-1.302;QD=4.98;ReadPosRankSum=0.910;VQSLOD=0.3262;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:15:19:147,19,0	0/0:3,0:3:2.22:0,2,7	./.	./.	1/1:6,0:6:1.88:30,2,0	1/1:13,1:6:11.24:57,11,0	1/1:8,0:6:16.69:81,17,0	0/0:15,0:5:6.18:0,6,21	0/1:6,0:3:2.10:7,0,2	0/1:7,0:5:6.18:6,0,26	0/1:10,0:8:17.51:37,0,18	1/1:7,0:6:14.06:70,14,0	./.	1/1:3,0:3:5.90:36,6,0	0/1:9,0:6:4.67:5,0,11	1/1:5,0:4:5.87:35,6,0	0/1:6,0:2:3.47:11,0,3	1/1:3,0:2:4.22:24,4,0	0/1:6,0:2:3.81:9,0,4	0/0:3,0:3:4.55:0,5,19	./.	1/1:6,1:6:11.31:74,11,0	0/1:9,0:6:4.95:27,0,5	1/1:5,0:4:2.44:6,2,0	1/1:7,0:6:14.02:68,14,0	0/0:3,0:2:3.74:0,4,12	0/0:6,0:1:2.04:0,2,6	1/1:11,4:13:30.96:174,31,0
chr10	93029764	.	CA	C	9303.33	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.951;DP=324;FS=15.591;HRun=1;HaplotypeScore=37.5421;InbreedingCoeff=0.7238;MQ=48.02;MQ0=7;MQRankSum=-2.978;QD=32.99;ReadPosRankSum=1.440;VQSLOD=2.9448;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:36.12:502,36,0	1/1:0,8:8:18.06:251,18,0	0/0:20,0:3:2.68:0,3,11	0/0:22,0:3:5.65:0,6,32	1/1:2,13:14:24.08:335,24,0	1/1:0,9:9:21.07:293,21,0	1/1:0,15:15:42.14:585,42,0	1/1:0,3:3:6.02:84,6,0	1/1:0,7:7:15.05:209,15,0	1/1:0,13:13:33.11:457,33,0	1/1:1,14:14:42.14:584,42,0	1/1:0,12:12:33.11:460,33,0	1/1:0,10:10:24.08:335,24,0	1/1:0,12:12:33.11:460,33,0	1/1:0,16:16:45.15:628,45,0	1/1:0,6:6:15.05:208,15,0	1/1:0,9:8:24.08:335,24,0	1/1:0,8:8:18.06:251,18,0	1/1:0,11:11:33.11:455,33,0	1/1:1,6:6:15.05:208,15,0	1/1:0,10:10:21.07:293,21,0	1/1:0,14:14:27.09:376,27,0	1/1:1,7:7:15.05:209,15,0	1/1:0,16:16:33.11:461,33,0	1/1:0,10:9:21.07:293,21,0	1/1:0,8:8:24.07:319,24,0	1/1:1,14:14:36.12:502,36,0	1/1:0,8:7:15.05:209,15,0
chr10	93031011	.	AC	A	13990.88	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=17.760;DP=837;FS=4.526;HRun=1;HaplotypeScore=80.7377;InbreedingCoeff=1.0000;MQ=85.70;MQ0=0;MQRankSum=-4.067;QD=39.86;ReadPosRankSum=3.652;VQSLOD=5.5708;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,60:60:99:2434,175,0	0/0:13,0:13:39.13:0,39,623	0/0:29,0:29:81.24:0,81,1233	0/0:29,0:29:80.96:0,81,1180	1/1:0,21:21:54.18:752,54,0	0/0:25,0:25:75.23:0,75,1171	0/0:30,0:30:87.27:0,87,1359	0/0:34,0:34:96.32:0,96,1505	1/1:0,34:34:93.31:1301,93,0	1/1:1,25:26:78.26:1089,78,0	1/1:0,23:23:69.23:965,69,0	0/0:35,0:35:99:0,99,1557	0/0:35,0:35:99:0,105,1676	0/0:30,0:30:90.29:0,90,1411	0/0:42,0:42:99:0,126,2005	1/1:0,29:29:78.26:1091,78,0	0/0:26,0:26:78.21:0,78,1194	0/0:25,0:25:69.20:0,69,1075	1/1:0,28:28:84.26:1157,84,0	1/1:0,26:26:75.25:1049,75,0	1/1:0,48:48:99:1846,132,0	0/0:24,0:24:69.22:0,69,1078	0/0:28,0:28:81.28:0,81,1284	0/0:38,0:38:99:0,114,1788	0/0:31,0:31:93.32:0,93,1482	1/1:0,29:29:87.29:1217,87,0	1/1:0,27:27:78.13:1091,78,0	0/0:12,0:12:36.12:0,36,574
chr10	93031661	.	CACTA	C	8361.89	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.989;DP=736;FS=3.941;HRun=0;HaplotypeScore=124.6943;InbreedingCoeff=0.9998;MQ=88.00;MQ0=0;MQRankSum=-3.387;QD=46.98;ReadPosRankSum=6.175;VQSLOD=5.5614;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,163,4313	0/0:11,0:11:30.10:0,30,788	0/0:33,0:33:93.32:0,93,2445	0/0:25,0:25:69.24:0,69,1679	0/0:19,0:19:48.16:0,48,1295	0/0:21,0:21:63.22:0,63,1699	0/0:25,0:25:72.25:0,72,1910	0/0:27,0:27:75.25:0,75,1952	0/0:25,0:25:75.24:0,75,1943	0/0:30,0:30:90.30:0,90,2345	0/0:14,0:14:39.12:0,39,953	1/1:1,33:34:87.14:1652,87,0	1/1:0,25:25:69.24:1310,69,0	1/1:1,27:28:72.25:1366,72,0	0/0:31,0:31:90.30:0,90,2354	0/0:34,0:33:99:0,102,2753	0/0:24,0:24:69.21:0,69,1779	0/0:15,0:15:45.15:0,45,1214	0/0:27,0:27:81.28:0,81,2187	0/0:15,0:15:39.13:0,39,1053	0/0:56,0:56:99:0,163,4315	1/1:0,16:16:45.15:854,45,0	1/1:3,19:23:50.92:943,51,0	1/1:1,38:39:87.26:1652,87,0	1/1:0,13:13:33.11:586,33,0	0/0:31,0:31:93.32:0,93,2510	0/0:27,0:26:81.28:0,81,2182	0/0:13,0:13:36.12:0,36,972
chr10	93031961	.	ACAG	A	274.75	PASS	AB=0.850;AC=9;AF=0.161;AN=56;BaseQRankSum=-3.874;DP=276;FS=10.653;HRun=0;HaplotypeScore=77.2317;InbreedingCoeff=-0.1200;MQ=56.20;MQ0=1;MQRankSum=-5.574;QD=3.23;ReadPosRankSum=-1.751;VQSLOD=0.6162;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,1:15:32.74:0,33,736	0/1:7,1:8:10.65:11,0,410	0/0:4,0:4:11.90:0,12,140	0/0:8,0:8:21.07:0,21,466	0/0:4,0:4:6.02:0,6,112	0/0:7,0:7:13.29:0,13,274	0/1:21,2:23:38.01:38,0,717	0/1:2,4:6:1.88:151,0,2	0/1:9,0:9:20.92:21,0,470	0/0:11,0:11:33.11:0,33,796	0/0:7,0:7:18.53:0,19,382	0/0:17,0:17:30.34:0,30,719	0/1:5,1:6:23.61:24,0,259	0/0:18,1:19:4.37:0,4,674	0/0:13,1:14:16.17:0,16,559	0/0:11,0:11:30.09:0,30,684	0/1:8,1:9:12.08:12,0,547	0/1:4,1:5:49.54:50,0,184	0/1:8,2:9:87.73:88,0,345	0/0:8,0:7:21.07:0,21,444	0/0:10,1:11:15.05:0,15,340	0/0:9,1:10:9.07:0,9,355	0/1:7,2:9:18.08:18,0,265	0/0:13,0:13:23.17:0,23,507	0/0:6,0:6:12.04:0,12,292	0/0:15,0:15:42.12:0,42,972	0/0:9,0:9:21.07:0,21,434	0/0:1,0:1:2.37:0,2,8
chr10	93032682	.	G	GAGC	1601.97	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.378;DP=655;FS=6.105;HRun=0;HaplotypeScore=118.1558;InbreedingCoeff=0.9047;MQ=61.26;MQ0=4;MQRankSum=-1.124;QD=18.63;ReadPosRankSum=2.398;VQSLOD=3.3753;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:39.13:0,39,545	0/0:14,0:14:24.08:0,24,336	0/0:18,0:13:24.02:0,24,297	0/0:28,0:24:29.93:0,30,419	0/0:22,0:22:18.06:0,18,252	1/1:9,9:18:18.06:361,18,0	1/1:12,18:30:24.08:481,24,0	0/0:27,0:27:36.12:0,36,504	0/0:26,0:26:48.14:0,48,656	0/0:28,0:28:27.09:0,27,369	0/0:12,0:12:3.04:0,3,42	0/0:23,0:23:63.21:0,63,885	0/0:28,0:28:57.16:0,57,771	0/0:25,0:25:45.15:0,45,632	0/0:17,0:17:36.12:0,36,505	0/0:21,0:21:42.11:0,42,547	0/0:28,0:28:54.18:0,54,757	0/0:26,0:26:51.14:0,51,693	0/0:20,0:19:21.05:0,21,276	0/0:15,0:15:14.63:0,15,210	0/0:41,0:40:78.26:0,78,1092	0/0:16,0:16:18.05:0,18,235	0/0:13,0:13:9.03:0,9,126	0/0:27,0:27:57.19:0,57,796	0/0:19,0:19:27.09:0,27,379	0/0:22,0:21:36.12:0,36,504	0/0:18,0:18:39.13:0,39,547	1/1:16,22:38:45.15:900,45,0
chr10	93033513	.	ATG	A	1180.87	PASS	AB=0.954;AC=26;AF=0.500;AN=52;BaseQRankSum=3.497;DP=749;FS=1.341;HRun=0;HaplotypeScore=141.6919;InbreedingCoeff=0.4237;MQ=61.76;MQ0=31;MQRankSum=0.627;QD=3.08;ReadPosRankSum=3.383;VQSLOD=2.5299;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:33:0.01:0,0,0	./.	0/0:24,0:20:2.98:0,3,22	0/0:26,0:21:6.01:0,6,62	0/0:34,0:31:2.99:0,3,24	1/1:15,0:18:13.21:56,13,0	0/1:20,0:21:19.42:19,0,24	0/0:56,0:39:13.05:0,13,110	0/1:23,0:21:18.45:18,0,45	0/0:40,0:38:9.01:0,9,194	1/1:20,0:17:0.36:1,0,0	1/1:16,7:21:25.30:271,25,0	1/1:19,2:20:10.67:110,11,0	1/1:28,3:28:7.52:50,8,0	0/0:22,0:20:7.53:0,8,234	0/1:25,0:20:2.07:2,0,16	0/0:30,0:30:36.60:0,37,592	0/0:29,1:28:11.93:0,12,508	0/0:19,0:15:2.04:0,2,6	1/1:20,0:20:0.94:2,1,0	./.	1/1:29,4:34:24.93:321,25,0	1/1:16,2:17:14.53:143,15,0	0/1:19,2:19:22.01:100,0,22	1/1:25,4:29:8.08:175,8,0	0/0:39,0:39:12.78:0,13,172	0/1:24,0:23:7.99:11,0,8	1/1:11,0:13:14.12:68,14,0
chr10	93033547	.	GTA	G	2590	PASS	AB=0.956;AC=36;AF=0.692;AN=52;BaseQRankSum=1.405;DP=867;FS=36.593;HRun=0;HaplotypeScore=166.1598;InbreedingCoeff=0.0694;MQ=31.51;MQ0=103;MQRankSum=-1.086;QD=3.82;ReadPosRankSum=-3.204;VQSLOD=0.6750;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:21:2.69:24,3,0	0/0:5,0:4:2.98:0,3,22	./.	./.	1/1:26,2:24:14.72:121,15,0	1/1:19,3:21:3.08:79,3,0	0/1:44,1:36:5.60:6,0,36	0/0:132,0:55:12.57:0,13,488	1/1:20,5:23:31.62:218,32,0	0/1:45,2:35:99:309,0,157	1/1:18,0:13:14.97:122,15,0	1/1:23,1:20:28.56:175,29,0	1/1:22,0:19:9.28:104,9,0	1/1:27,1:21:14.04:82,14,0	0/1:31,0:27:61.29:61,0,211	1/1:24,3:19:26.75:169,27,0	0/1:38,0:37:10.68:11,0,855	0/0:35,0:30:47.69:0,48,810	0/1:45,0:20:69.19:139,0,69	0/1:14,2:13:37.15:55,0,37	1/1:64,1:46:8.88:69,9,0	1/1:21,2:21:21.76:206,22,0	1/1:15,0:11:13.82:82,14,0	0/1:23,0:18:2.22:27,0,2	0/1:25,0:21:4.47:70,0,4	0/1:45,3:40:39.13:363,0,39	1/1:18,2:18:31.69:219,32,0	0/1:8,2:7:8.41:40,0,8
chr10	93033554	.	TGTG	T	1638.13	PASS	AB=0.991;AC=21;AF=0.389;AN=54;BaseQRankSum=7.372;DP=823;FS=2.446;HRun=0;HaplotypeScore=177.9213;InbreedingCoeff=0.0040;MQ=29.05;MQ0=114;MQRankSum=-5.293;QD=3.38;ReadPosRankSum=1.581;VQSLOD=2.8925;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:18:1.56:4,2,0	0/0:4,1:4:3.01:0,3,68	0/0:3,0:1:3.01:0,3,30	./.	1/1:24,0:20:3.01:38,3,0	0/1:22,1:21:1.36:84,0,1	0/0:49,0:38:8.62:0,9,50	0/0:132,1:52:87.72:0,88,1214	1/1:24,0:22:13.86:391,14,0	0/1:46,0:29:99:219,0,317	0/0:14,0:9:3.01:0,3,44	0/1:24,0:19:31.31:31,0,133	0/1:20,0:17:0.71:1,0,66	0/0:24,0:17:2.73:0,3,39	0/0:31,0:28:28.32:0,28,617	1/1:24,0:15:5.35:150,5,0	0/1:37,0:37:3.67:4,0,1447	0/1:37,1:33:76.98:77,0,1350	0/1:40,0:13:99:180,0,119	0/0:17,0:12:3.68:0,4,93	0/1:63,2:43:4.67:5,0,8	0/0:19,0:17:24.01:0,24,229	0/0:15,0:11:8.94:0,9,90	0/0:19,0:13:2.59:0,3,16	0/1:27,0:23:20.13:20,0,58	0/1:42,0:31:99:347,0,185	0/1:16,0:14:28.64:159,0,29	1/1:7,2:6:5.80:79,6,0
chr10	93033556	.	TG	T	1496.62	PASS	AB=0.845;AC=22;AF=0.407;AN=54;BaseQRankSum=7.586;DP=814;FS=4.810;HRun=2;HaplotypeScore=166.7708;InbreedingCoeff=-0.0798;MQ=28.52;MQ0=117;MQRankSum=-6.626;QD=3.03;ReadPosRankSum=1.687;VQSLOD=0.2986;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,9:18:1.09:3,1,0	0/0:5,0:4:3.01:0,3,45	0/0:3,0:1:3:0,3,26	./.	1/1:14,8:19:3.01:38,3,0	0/1:18,4:21:10.40:57,0,10	0/0:48,2:40:11.07:0,11,68	0/0:127,5:50:87.27:0,87,1079	1/1:11,12:21:24.88:352,25,0	0/1:37,6:26:99:177,0,297	0/0:8,5:8:3.01:0,3,40	0/1:20,4:19:29.43:29,0,147	0/1:17,3:17:2.59:3,0,67	0/0:21,2:17:2.73:0,3,37	0/0:31,1:29:32.01:0,32,505	1/1:12,12:15:5.52:137,6,0	0/1:37,2:38:15.11:15,0,1096	0/1:33,5:33:55.87:56,0,938	0/1:38,5:13:99:153,0,131	0/1:10,7:12:30.02:30,0,80	0/1:47,16:41:2.58:12,0,3	0/0:18,1:17:24.09:0,24,238	0/0:13,0:9:9.02:0,9,104	0/0:17,2:13:2.59:0,3,16	0/1:23,2:21:42.09:42,0,79	0/1:29,11:29:99:354,0,144	0/1:9,5:12:28.14:149,0,28	1/1:10,0:6:5.53:44,6,0
chr10	93033557	.	G	GT	1473.89	PASS	AB=0.943;AC=21;AF=0.389;AN=54;BaseQRankSum=7.942;DP=820;FS=4.034;HRun=1;HaplotypeScore=174.2775;InbreedingCoeff=-0.0767;MQ=28.10;MQ0=116;MQRankSum=-6.395;QD=3.07;ReadPosRankSum=1.883;VQSLOD=0.1808;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,4:19:1.08:3,1,0	0/0:4,1:4:3.01:0,3,42	0/0:3,0:1:2.98:0,3,21	./.	1/1:23,1:20:3.01:38,3,0	0/1:16,0:21:26.89:54,0,27	0/0:38,9:40:10.11:0,10,68	0/0:122,1:47:85.19:0,85,1019	1/1:21,2:22:33.71:353,34,0	0/1:41,0:24:99:164,0,299	0/0:13,1:9:3.01:0,3,40	0/1:23,2:20:55.53:56,0,157	0/1:18,1:17:32.96:41,0,33	0/0:25,3:21:2.73:0,3,37	0/0:25,6:28:30.76:0,31,482	1/1:25,0:16:2.84:138,3,0	0/1:36,2:37:21.72:22,0,1035	0/1:35,0:30:7.34:7,0,884	0/1:43,0:13:99:191,0,127	0/0:16,3:14:2.95:0,3,78	0/1:63,2:44:1.51:2,0,8	0/0:21,0:19:23.79:0,24,238	0/0:14,0:10:9.03:0,9,113	0/0:14,2:10:2.73:0,3,16	0/1:22,3:21:41.59:42,0,93	0/1:39,1:28:99:335,0,155	0/1:15,0:13:19.84:150,0,20	1/1:9,1:6:4.97:31,5,0
chr10	93033558	.	GTGTGTGTGTGTGTA	G	2781.03	PASS	AB=0.940;AC=24;AF=0.444;AN=54;BaseQRankSum=4.473;DP=826;FS=4.097;HRun=0;HaplotypeScore=236.1762;InbreedingCoeff=-0.1939;MQ=27.78;MQ0=120;MQRankSum=-6.506;QD=4.10;ReadPosRankSum=-1.295;VQSLOD=2.5448;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,2:19:18.68:19,0,46	0/0:4,0:4:3.01:0,3,144	0/0:3,0:1:3.01:0,3,55	./.	0/1:22,2:20:0:0,0,0	0/1:23,0:21:7.03:26,0,7	0/1:52,0:41:25.20:25,0,101	0/1:131,0:48:99:252,0,1029	0/1:23,1:22:29.56:272,0,30	0/1:40,2:24:99:332,0,454	0/0:14,1:10:2.60:0,3,62	0/1:21,2:18:19.65:403,0,20	0/1:15,3:16:26.31:194,0,26	0/0:21,7:21:5.07:0,5,52	0/0:31,0:28:31.16:0,31,1024	1/1:23,1:15:0.03:189,0,0	0/0:39,0:38:76.49:0,76,2610	0/1:33,0:29:6.53:7,0,2742	1/1:42,1:13:18.57:353,19,0	0/0:19,0:14:8.89:0,9,281	0/1:66,0:45:0.51:1,0,102	1/1:20,2:20:5.87:41,6,0	1/1:10,5:11:3:25,3,0	0/1:14,2:11:0:0,0,0	0/1:20,4:21:7.65:84,0,8	0/1:38,1:28:99:581,0,455	0/1:13,2:13:22.92:115,0,23	0/1:10,0:6:7.97:8,0,12
chr10	93033570	.	GT	G	1453.89	PASS	AB=0.846;AC=16;AF=0.308;AN=52;BaseQRankSum=6.673;DP=860;FS=2.509;HRun=1;HaplotypeScore=183.2863;InbreedingCoeff=-0.0796;MQ=26.94;MQ0=125;MQRankSum=-6.033;QD=2.64;ReadPosRankSum=-0.760;VQSLOD=-0.6393;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,2:18:14.37:14,0,35	0/0:8,1:8:8.55:0,9,128	0/0:3,0:1:3.01:0,3,48	./.	0/1:15,13:23:0:0,0,0	0/0:21,0:19:8.16:0,8,62	0/0:59,0:48:7.71:0,8,79	0/1:143,7:53:99:210,0,703	0/1:16,5:20:24.42:225,0,24	0/1:37,4:25:99:194,0,299	0/0:7,5:9:3.01:0,3,48	0/1:17,4:20:48.74:150,0,49	0/1:17,3:18:88.12:126,0,88	1/1:24,4:23:5.65:53,6,0	0/0:34,0:30:41.85:0,42,562	1/1:10,6:10:8.93:102,9,0	0/0:41,0:41:97.43:0,97,1352	0/0:32,0:28:60.01:0,60,1039	0/1:39,3:14:99:115,0,131	0/0:11,9:17:11.88:0,12,182	0/1:62,5:47:2.97:3,0,89	0/0:14,2:14:2.66:0,3,17	./.	0/1:13,1:10:0:0,0,0	0/0:23,3:22:4.96:0,5,24	0/1:36,7:29:99:297,0,336	0/1:11,3:13:35.67:106,0,36	0/0:8,0:5:11.83:0,12,105
chr10	93033580	.	GTAT	G	186.94	PASS	AB=0.919;AC=8;AF=0.148;AN=54;BaseQRankSum=3.852;DP=912;FS=2.729;HRun=0;HaplotypeScore=209.1549;InbreedingCoeff=-0.0891;MQ=27.13;MQ0=134;MQRankSum=-2.817;QD=0.60;ReadPosRankSum=-1.090;VQSLOD=2.8042;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:19:8.46:0,8,137	0/0:10,1:9:11.57:0,12,269	0/0:3,0:1:3.01:0,3,48	./.	0/0:26,0:21:2.96:0,3,19	0/1:12,11:18:9:101,0,9	0/1:61,2:51:5.32:5,0,112	0/0:157,1:59:87.08:0,87,2413	0/0:21,1:20:25.62:0,26,267	0/0:46,0:26:50.39:0,50,760	0/0:13,1:10:5.09:0,5,19	0/0:24,1:20:36.70:0,37,460	0/0:23,0:20:3.65:0,4,320	0/0:32,0:27:6.35:0,6,119	0/0:32,0:29:36.09:0,36,923	0/0:16,0:10:0.52:0,1,61	0/0:41,0:38:55.43:0,55,1663	0/0:36,0:29:54.25:0,54,1472	0/1:41,2:18:95.32:95,0,591	0/1:23,1:19:2.21:2,0,286	0/1:74,2:51:25.83:26,0,135	0/1:20,0:16:0.12:0,0,0	0/0:14,0:11:0:0,0,0	0/0:14,0:10:2.78:0,3,73	0/0:24,0:20:2.76:0,3,53	0/1:46,2:29:29.26:29,0,867	0/0:15,0:13:15.48:0,15,161	0/1:13,2:13:42.01:42,0,141
chr10	93033615	.	ATG	A	1002.81	PASS	AB=0.781;AC=18;AF=0.346;AN=52;BaseQRankSum=6.340;DP=1023;FS=0.000;HRun=0;HaplotypeScore=218.8459;InbreedingCoeff=0.2081;MQ=26.90;MQ0=224;MQRankSum=-7.213;QD=2.71;ReadPosRankSum=0.562;VQSLOD=2.4614;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,11:29:7.79:90,0,8	0/0:11,0:9:24.07:0,24,363	./.	./.	0/1:13,11:16:0:0,0,0	0/0:21,0:18:23.91:0,24,319	0/0:62,0:42:23.99:0,24,247	0/0:160,2:67:99:0,126,1835	1/1:12,6:10:3.91:74,4,0	0/1:30,6:21:99:158,0,124	0/1:10,8:12:0.15:0,0,1	0/1:35,1:28:9.50:28,0,10	0/0:32,0:23:21.35:0,21,89	0/0:40,0:30:5.95:0,6,39	0/0:39,0:31:48.59:0,49,815	1/1:15,5:11:6.35:80,6,0	0/0:43,0:40:90.26:0,90,1406	0/0:32,0:26:60.14:0,60,896	0/1:36,12:21:78:342,0,78	0/1:13,11:17:19.88:20,0,130	0/0:72,14:52:2.69:0,3,23	1/1:34,0:26:0.29:1,0,0	1/1:21,0:16:0.64:1,1,0	0/0:23,0:15:6.32:0,6,65	0/0:30,0:22:2.55:0,3,8	0/1:28,10:20:90.86:307,0,91	1/1:11,6:10:2.66:39,3,0	0/0:18,0:17:49.71:0,50,704
chr10	93033625	.	GTAT	G	255.42	PASS	AB=0.958;AC=11;AF=0.212;AN=52;BaseQRankSum=6.447;DP=1072;FS=22.728;HRun=0;HaplotypeScore=234.6817;InbreedingCoeff=0.0916;MQ=26.76;MQ0=258;MQRankSum=-6.185;QD=0.83;ReadPosRankSum=-1.037;VQSLOD=1.2159;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,1:31:5.50:6,0,65	0/0:13,0:11:24.08:0,24,547	./.	./.	0/0:24,1:17:3.01:0,3,62	0/0:21,0:19:25.90:0,26,594	0/0:66,0:45:36.29:0,36,658	0/0:139,0:58:99:0,157,3280	0/0:23,0:10:6.26:0,6,37	0/0:41,0:20:19.90:0,20,538	0/0:17,1:12:0.89:0,1,2	0/1:37,1:30:83.29:83,0,116	0/1:27,1:19:16.11:115,0,16	0/1:40,1:32:4.92:97,0,5	0/0:41,1:36:49.46:0,49,1211	0/0:22,2:13:9.17:0,9,67	0/0:44,0:41:99:0,109,2322	0/0:31,0:25:66.43:0,66,1503	0/0:57,0:20:44.90:0,45,498	0/0:20,1:17:17.49:0,17,231	0/0:95,0:54:12.34:0,12,209	1/1:34,1:26:2.54:15,3,0	1/1:21,1:17:2.47:17,2,0	0/1:22,0:13:9.10:9,0,67	0/1:27,2:20:8.76:9,0,47	0/1:47,2:27:36.06:36,0,502	0/0:17,1:8:2.86:0,3,16	0/0:18,0:18:54.17:0,54,1173
chr10	93033626	.	TA	T	765.12	PASS	AB=0.724;AC=8;AF=0.154;AN=52;BaseQRankSum=3.894;DP=1069;FS=0.000;HRun=1;HaplotypeScore=219.8281;InbreedingCoeff=0.0154;MQ=26.66;MQ0=265;MQRankSum=-4.343;QD=2.92;ReadPosRankSum=1.621;VQSLOD=-0.4067;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,3:31:11.13:0,11,72	0/0:13,0:11:24.08:0,24,355	./.	./.	0/0:24,0:17:3.01:0,3,47	0/0:22,0:19:25.75:0,26,387	0/0:63,2:44:36.45:0,36,484	0/0:135,1:55:99:0,151,2271	0/0:23,1:10:3.79:0,4,20	0/0:40,2:19:0.90:0,1,370	0/0:17,1:12:0.47:0,0,2	0/1:20,18:29:78.36:254,0,78	0/1:12,14:19:8.56:381,0,9	0/1:21,18:29:14.11:121,0,14	0/0:47,0:38:34.53:0,35,783	0/0:24,2:14:9.07:0,9,51	0/0:45,0:42:99:0,106,1563	0/0:31,0:25:71.95:0,72,1041	0/0:55,0:19:44.07:0,44,380	0/0:21,0:17:9.73:0,10,133	0/0:95,0:54:13.15:0,13,163	0/1:13,21:24:0.31:0,0,0	0/1:8,12:14:0.27:0,0,0	0/1:16,6:13:39:56,0,39	0/1:17,11:20:29.94:63,0,30	0/1:51,0:28:1.01:1,0,419	0/0:17,1:8:3.09:0,3,16	0/0:20,0:18:54.08:0,54,779
chr10	93033637	.	ATG	A	519.51	PASS	AB=0.973;AC=14;AF=0.269;AN=52;BaseQRankSum=6.504;DP=1149;FS=5.199;HRun=0;HaplotypeScore=238.1818;InbreedingCoeff=0.2209;MQ=26.29;MQ0=282;MQRankSum=-7.041;QD=1.33;ReadPosRankSum=-0.194;VQSLOD=2.2595;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:40,2:30:4.07:70,4,0	0/0:13,0:10:18.06:0,18,289	./.	./.	0/0:30,1:21:2.96:0,3,50	0/0:22,0:19:21.07:0,21,339	0/0:72,0:49:39.12:0,39,599	0/0:133,0:51:93.66:0,94,1326	0/1:25,0:11:0:0,0,0	0/1:52,1:25:52.78:53,0,511	0/1:21,1:15:0.14:0,0,0	0/0:42,0:32:23.23:0,23,239	0/1:31,0:22:12.18:12,0,82	0/0:42,0:30:16.33:0,16,76	0/0:53,0:40:36.41:0,36,766	1/1:31,1:16:7.71:53,8,0	0/0:46,0:42:96.39:0,96,1493	0/0:31,0:27:5.78:0,6,803	0/1:47,3:14:29.27:167,0,29	0/1:27,1:21:10.88:11,0,92	0/0:102,4:60:12.82:0,13,176	0/0:37,0:28:6.83:0,7,44	0/0:28,0:22:7.21:0,7,60	0/1:22,0:13:11.05:11,0,16	0/0:29,0:20:7.47:0,7,64	0/1:59,4:31:99:225,0,218	1/1:24,0:11:9.22:61,9,0	0/0:25,0:19:43.53:0,44,713
chr10	93033644	.	TGTGTG	T	996.15	PASS	AB=0.958;AC=10;AF=0.192;AN=52;BaseQRankSum=5.488;DP=1256;FS=10.080;HRun=0;HaplotypeScore=273.3573;InbreedingCoeff=0.1479;MQ=26.19;MQ0=280;MQRankSum=-5.173;QD=2.66;ReadPosRankSum=-2.565;VQSLOD=0.8276;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:40,4:29:44.86:111,0,45	0/0:14,0:11:21.07:0,21,538	./.	./.	0/0:32,2:23:3.01:0,3,84	0/0:27,0:21:22.60:0,23,647	0/0:69,0:49:49.01:0,49,1150	0/0:173,0:62:99:0,104,2575	1/1:31,0:15:3.01:56,3,0	0/1:68,1:36:99:219,0,1120	0/0:26,4:21:2.85:0,3,20	0/1:45,0:35:0.75:1,0,310	0/0:33,0:24:41.33:0,41,397	0/0:47,0:35:19.37:0,19,165	0/0:55,0:41:35.26:0,35,1190	0/1:29,5:18:2.62:101,0,3	0/0:50,0:45:99:0,109,2781	0/0:34,0:29:72.79:0,73,1706	0/1:51,0:16:72.11:72,0,206	0/0:26,2:19:6.02:0,6,167	0/0:110,0:65:0.21:0,0,248	0/0:37,0:29:9.28:0,9,55	0/0:29,0:23:6.78:0,7,96	0/0:24,0:13:4.26:0,4,20	0/0:24,0:16:13.68:0,14,160	0/1:69,2:33:99:327,0,544	1/1:18,11:16:9.15:244,9,0	0/0:26,0:19:21.45:0,21,1246
chr10	93033647	.	GTGGT	G	787.60	PASS	AB=0.945;AC=14;AF=0.269;AN=52;BaseQRankSum=5.560;DP=1236;FS=7.164;HRun=0;HaplotypeScore=259.6730;InbreedingCoeff=-0.1649;MQ=26.39;MQ0=267;MQRankSum=-6.304;QD=1.47;ReadPosRankSum=-0.138;VQSLOD=1.5149;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:35,7:27:42.83:43,0,125	0/0:16,0:13:27.07:0,27,587	./.	./.	0/0:26,7:22:6.02:0,6,106	0/0:27,0:20:35.15:0,35,715	0/0:69,0:48:51.60:0,52,1179	0/0:179,0:63:99:0,147,2608	0/1:26,1:11:7.68:8,0,24	0/1:68,2:37:86.37:86,0,1107	0/0:23,5:21:5.83:0,6,51	0/1:47,0:36:0.30:0,0,398	0/1:32,0:23:33.90:34,0,98	0/1:46,0:33:9.02:9,0,74	0/0:53,0:41:51.57:0,52,1418	0/1:29,3:16:8.11:51,0,8	0/0:49,0:45:99:0,110,2633	0/0:34,0:29:76.29:0,76,1679	0/1:44,4:15:99:229,0,172	0/1:19,6:16:7.87:8,0,183	0/0:103,4:64:17.01:0,17,287	0/1:36,0:28:4.06:4,0,87	0/0:30,0:24:13.16:0,13,170	0/1:24,1:14:11.31:11,0,16	0/0:26,0:17:18.82:0,19,190	0/1:69,3:33:99:361,0,589	1/1:27,3:17:3.33:84,3,0	0/0:24,0:17:48.89:0,49,1215
chr10	93033649	.	GGT	G	750.30	PASS	AB=0.873;AC=13;AF=0.250;AN=52;BaseQRankSum=6.013;DP=1251;FS=11.347;HRun=0;HaplotypeScore=249.3108;InbreedingCoeff=0.1606;MQ=26.58;MQ0=261;MQRankSum=-6.481;QD=1.86;ReadPosRankSum=1.157;VQSLOD=1.2016;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:30:20.09:0,20,163	0/0:16,0:13:22.93:0,23,364	./.	./.	0/0:32,0:21:5.99:0,6,57	0/0:26,0:20:32.14:0,32,463	0/0:69,0:49:48.58:0,49,725	0/0:175,1:61:99:0,112,1413	0/0:29,0:13:1.47:0,1,26	0/0:73,0:38:33.78:0,34,673	0/0:28,0:22:5.83:0,6,51	0/1:30,16:35:86.41:86,0,209	1/1:18,14:23:39:455,39,0	1/1:31,15:33:5.10:133,5,0	0/0:56,0:43:42.93:0,43,809	0/1:35,0:19:5.14:5,0,13	0/0:47,0:44:85.90:0,86,1435	0/0:34,0:30:64.23:0,64,993	0/1:49,0:17:47.27:47,0,156	0/0:23,0:16:9.03:0,9,127	0/0:108,0:62:13.15:0,13,113	0/1:14,20:27:10.92:11,0,50	0/0:16,15:25:9.02:0,9,121	1/1:20,5:15:3.36:25,3,0	0/1:16,9:16:70.52:71,0,98	0/1:74,0:34:52.58:53,0,419	0/1:33,0:19:15.31:15,0,27	0/0:24,0:17:24.74:0,25,678
chr10	93033660	.	GTA	G	420.69	PASS	AB=0.991;AC=12;AF=0.231;AN=52;BaseQRankSum=7.412;DP=1317;FS=42.524;HRun=0;HaplotypeScore=263.8060;InbreedingCoeff=-0.0809;MQ=27.65;MQ0=272;MQRankSum=-5.077;QD=0.93;ReadPosRankSum=-3.310;VQSLOD=0.8667;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:35:23.16:0,23,222	0/0:19,0:13:7.09:0,7,397	./.	./.	0/0:36,1:23:8.81:0,9,112	0/0:29,0:22:32.19:0,32,531	0/0:76,0:56:39.79:0,40,869	0/0:173,0:57:99:0,105,1465	0/0:33,0:17:7.67:0,8,50	0/0:81,0:43:23.24:0,23,1003	0/1:31,0:23:13.44:13,0,40	0/1:48,2:38:53.79:54,0,267	1/1:30,1:21:31.36:270,31,0	0/1:51,1:36:47.33:115,0,47	0/0:60,0:43:58.05:0,58,931	0/1:36,0:20:14.52:15,0,46	0/0:44,0:40:84.64:0,85,1520	0/0:31,1:29:57.34:0,57,1165	0/1:56,0:20:2.23:2,0,303	0/1:25,0:17:18.12:18,0,99	0/0:113,0:68:18.49:0,18,188	0/0:37,1:28:6.01:0,6,90	0/0:37,0:30:13.22:0,13,206	0/1:29,1:17:14.27:14,0,16	0/1:29,0:22:41.68:42,0,208	0/1:74,0:34:14.89:15,0,613	0/1:39,0:23:8.50:9,0,124	0/0:30,0:17:44.90:0,45,799
chr10	93033679	.	GTGTA	G	1491.07	PASS	AB=0.995;AC=19;AF=0.365;AN=52;BaseQRankSum=1.930;DP=1262;FS=0.414;HRun=0;HaplotypeScore=268.2285;InbreedingCoeff=-0.2464;MQ=29.90;MQ0=205;MQRankSum=-0.092;QD=2.01;ReadPosRankSum=-2.216;VQSLOD=1.7972;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:49,0:37:61.54:62,0,65	0/1:18,0:13:35.06:107,0,35	./.	./.	0/1:34,0:22:7.14:7,0,62	0/1:31,0:25:26.64:87,0,27	0/0:73,0:58:4.53:0,5,241	0/1:146,0:45:99:138,0,280	0/0:28,0:20:6.35:0,6,88	0/0:77,0:47:38.19:0,38,959	0/0:28,0:21:5.73:0,6,81	0/1:51,0:40:81.63:194,0,82	0/1:30,0:21:64.97:190,0,65	0/1:44,0:31:14.20:134,0,14	0/1:58,0:42:99:208,0,138	0/1:34,0:22:1.56:2,0,245	0/0:40,0:37:80.40:0,80,1116	0/1:37,0:32:82.99:83,0,289	0/0:62,0:29:31.15:0,31,407	0/1:25,0:19:12.11:12,0,223	0/0:108,0:71:13.03:0,13,183	1/1:34,8:33:8.62:135,9,0	0/1:32,1:28:10.11:62,0,10	1/1:34,0:22:17.24:142,17,0	0/1:30,0:24:68.85:75,0,69	0/0:70,0:36:77.56:0,78,752	0/1:40,0:28:11.59:12,0,719	0/0:28,0:16:20.93:0,21,246
chr10	93033683	.	ATGTG	A	2582.40	PASS	AB=0.841;AC=21;AF=0.404;AN=52;BaseQRankSum=-2.051;DP=1254;FS=30.183;HRun=0;HaplotypeScore=261.2693;InbreedingCoeff=0.3876;MQ=30.97;MQ0=185;MQRankSum=1.180;QD=4.75;ReadPosRankSum=1.433;VQSLOD=1.3311;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,1:36:22.51:23,0,50	1/1:13,5:13:18.06:281,18,0	./.	./.	0/0:36,0:25:6.70:0,7,95	1/1:17,0:26:10.63:88,11,0	0/1:67,0:56:19.46:20,0,19	0/0:148,0:46:3:0,3,26	0/0:30,0:25:17.56:0,18,157	0/0:68,0:46:47.48:0,47,739	0/0:30,0:25:15.85:0,16,168	0/1:38,10:39:29.27:335,0,29	1/1:20,7:19:20.97:334,21,0	0/1:27,20:34:5.27:221,0,5	1/1:48,7:41:24.12:383,24,0	0/0:35,0:23:14.97:0,15,245	0/0:35,0:35:38.56:0,39,715	0/1:26,10:31:13.51:217,0,14	0/0:60,0:31:11.01:0,11,118	0/0:24,0:20:21.59:0,22,298	0/0:104,0:71:11.50:0,11,133	1/1:36,4:32:12.01:188,12,0	1/1:21,12:28:7.68:142,8,0	1/1:25,9:22:17.96:287,18,0	0/1:22,5:24:18.05:205,0,18	0/0:66,0:40:45.49:0,45,629	0/0:35,0:29:47.60:0,48,782	0/1:24,0:17:30.86:44,0,31
chr10	93035700	.	T	TAGGAAGGAAGGAAGGAAGGA	35213.89	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=6.503;DP=668;FS=2.717;HRun=0;HaplotypeScore=349.1273;InbreedingCoeff=0.9982;MQ=64.52;MQ0=1;MQRankSum=-12.822;QD=77.73;ReadPosRankSum=-1.067;VQSLOD=3.4500;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,16:39:30.10:2058,30,0	0/0:13,0:13:27.09:0,27,1153	0/0:26,0:24:24.88:0,25,778	0/0:19,0:18:32.98:0,33,964	1/1:27,0:26:42.13:2109,42,0	0/0:25,0:25:51.17:0,51,2375	0/0:24,0:24:48.16:0,48,1852	0/0:23,0:23:39.12:0,39,1235	1/1:15,0:15:27.09:930,27,0	1/1:30,0:30:66.22:2120,66,0	1/1:22,0:22:31.05:1559,31,0	1/1:36,0:35:75.26:3062,75,0	1/1:25,0:25:63.22:2047,63,0	1/1:28,0:28:60.21:2085,60,0	0/0:24,0:24:57.18:0,57,2699	1/1:21,0:21:48.16:2550,48,0	0/0:35,0:35:84.29:0,84,3950	0/0:16,0:16:33.11:0,33,1477	1/1:18,0:18:33.10:1106,33,0	1/1:26,0:28:72.20:2866,72,0	1/1:17,0:17:24.08:1339,24,0	1/1:24,0:23:56.53:1770,57,0	1/1:18,0:18:39.09:1074,39,0	1/1:17,0:17:30.06:1366,30,0	1/1:34,0:34:57.11:1970,57,0	1/1:33,0:33:72.24:3197,72,0	1/1:21,0:21:45.15:2004,45,0	0/0:9,0:9:21.06:0,21,991
chr10	93035721	.	A	AG	5502.03	PASS	AB=0.714;AC=17;AF=0.304;AN=56;BaseQRankSum=8.696;DP=686;FS=0.330;HRun=1;HaplotypeScore=99.7864;InbreedingCoeff=-0.4359;MQ=66.37;MQ0=3;MQRankSum=-8.283;QD=13.10;ReadPosRankSum=2.837;VQSLOD=3.9057;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:51.03:0,51,687	0/0:14,0:14:42.13:0,42,532	0/0:31,0:28:58.05:0,58,765	0/0:25,0:23:65.16:0,65,815	0/1:16,9:24:99:131,0,425	0/0:27,0:27:78.24:0,78,997	0/0:20,0:20:60.20:0,60,779	0/0:31,0:31:93.28:0,93,1172	0/1:7,7:14:99:257,0,194	0/1:15,11:26:99:409,0,438	0/1:12,10:22:99:189,0,305	0/1:19,15:33:99:660,0,197	0/1:19,12:31:99:579,0,146	0/1:13,13:26:86.13:543,0,86	0/0:27,0:27:81.24:0,81,1024	0/1:14,9:23:99:250,0,410	0/0:33,0:33:99:0,99,1270	0/0:14,0:14:42.14:0,42,545	0/1:14,9:21:99:279,0,386	0/1:22,11:33:99:426,0,676	0/1:14,6:20:99:120,0,439	0/1:17,7:23:99:361,0,117	0/1:10,7:17:99:197,0,118	0/1:16,5:21:47.52:48,0,174	0/1:14,12:26:99:229,0,125	0/1:18,16:34:99:531,0,496	0/1:10,11:21:99:296,0,245	0/0:14,0:14:42.14:0,42,545
chr10	93036118	.	T	TA	2655.38	PASS	AB=0.850;AC=23;AF=0.411;AN=56;BaseQRankSum=-2.032;DP=448;FS=6.988;HRun=12;HaplotypeScore=81.1496;InbreedingCoeff=0.7192;MQ=63.10;MQ0=0;MQRankSum=-0.682;QD=13.02;ReadPosRankSum=-2.349;VQSLOD=2.9270;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:23:38.10:327,38,0	0/0:6,0:6:14.91:0,15,109	0/0:15,0:14:10.01:0,10,61	0/1:9,0:9:9.22:9,0,20	1/1:5,10:15:23.99:222,24,0	0/0:5,0:20:21.21:0,21,63	0/0:3,0:15:20.36:0,20,59	0/0:4,0:29:45.81:0,46,132	1/1:2,4:7:19.92:152,20,0	1/1:2,13:17:35.86:314,36,0	1/1:1,12:13:26.95:243,27,0	0/0:14,2:16:9.67:0,10,234	0/0:9,0:9:17.87:0,18,131	0/0:9,0:9:17.84:0,18,132	0/0:17,0:17:43.80:0,44,312	1/1:7,8:17:0.60:265,1,0	0/0:20,0:20:50.66:0,51,370	0/0:20,0:20:47.71:0,48,350	1/1:4,9:14:27.15:213,27,0	1/1:5,10:15:38.18:338,38,0	0/1:3,6:9:28.68:73,0,29	0/0:13,0:13:26.81:0,27,197	0/1:18,1:19:11.16:11,0,180	0/0:23,0:25:49.19:0,49,341	0/0:18,0:18:23.34:0,23,265	1/1:7,16:23:6.67:334,7,0	1/1:5,17:23:22.94:363,23,0	0/0:2,0:11:16.28:0,16,47
chr10	93036192	.	AAC	A	4176.05	PASS	AB=0.986;AC=23;AF=0.411;AN=56;BaseQRankSum=14.999;DP=486;FS=2.130;HRun=0;HaplotypeScore=126.4460;InbreedingCoeff=0.0285;MQ=62.26;MQ0=7;MQRankSum=-12.263;QD=17.26;ReadPosRankSum=5.887;VQSLOD=3.8973;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:23.12:206,0,23	0/0:6,0:6:18.06:0,18,299	0/0:47,0:23:14.04:0,14,428	0/0:36,0:20:21.66:0,22,322	0/1:15,0:15:52.26:229,0,52	0/0:29,0:29:84.13:0,84,1294	0/0:18,0:18:54.13:0,54,819	0/0:32,0:32:87.03:0,87,1307	0/1:7,0:7:65.26:65,0,99	1/1:10,0:10:7.30:195,7,0	0/1:12,0:12:12.31:162,0,12	0/1:12,1:13:38.16:283,0,38	0/1:13,0:13:89.40:156,0,89	1/1:15,1:16:23.60:361,24,0	0/0:21,0:20:57.17:0,57,944	1/1:18,1:19:26.92:417,27,0	0/0:19,0:19:57.07:0,57,880	0/0:19,0:19:54.90:0,55,718	0/1:15,0:15:99:221,0,110	0/1:15,0:15:63.30:263,0,63	0/1:4,0:4:25.40:45,0,25	1/1:8,1:9:24.02:223,24,0	1/1:10,1:11:30.85:264,31,0	0/1:11,0:11:89.02:100,0,89	0/1:15,2:17:23.05:320,0,23	0/1:19,0:19:40.15:350,0,40	0/1:21,0:21:93.96:316,0,94	0/0:17,0:17:51.17:0,51,844
chr10	93036193	.	AC	A	3117.81	PASS	AB=0.626;AC=24;AF=0.429;AN=56;BaseQRankSum=15.484;DP=471;FS=2.628;HRun=1;HaplotypeScore=119.0295;InbreedingCoeff=0.1255;MQ=62.65;MQ0=7;MQRankSum=-12.862;QD=13.50;ReadPosRankSum=5.975;VQSLOD=3.0840;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:4,9:13:6.51:163,0,7	0/0:6,0:6:18.06:0,18,233	0/0:42,4:22:16.93:0,17,336	0/0:36,0:20:27.21:0,27,240	0/1:6,10:16:54.66:176,0,55	0/0:29,0:29:84.10:0,84,1012	0/0:18,0:18:54.12:0,54,653	0/0:30,0:30:88.08:0,88,1043	0/1:4,3:7:47.84:48,0,77	1/1:4,6:10:7.26:161,7,0	0/1:6,7:13:29.32:126,0,29	0/1:3,10:13:32.14:216,0,32	0/1:5,7:12:61.66:119,0,62	1/1:2,13:15:12.85:279,13,0	0/0:19,0:19:57.18:0,57,733	1/1:3,14:17:27.32:345,27,0	0/0:19,0:19:57.06:0,57,696	0/0:20,0:20:57.84:0,58,600	0/1:4,9:13:87.34:171,0,87	0/1:4,11:15:31.65:199,0,32	0/1:2,2:4:8:33,0,8	1/1:1,7:8:23.92:189,24,0	1/1:6,4:11:31.81:231,32,0	0/1:5,5:10:68.97:81,0,69	1/1:4,11:15:10.84:254,11,0	0/1:5,12:17:25.68:274,0,26	0/1:11,11:22:99:241,0,126	0/0:17,0:17:51.16:0,51,654
chr10	93036196	.	AAAAAAC	A	7015.88	PASS	AB=0.634;AC=24;AF=0.429;AN=56;BaseQRankSum=14.423;DP=470;FS=2.131;HRun=0;HaplotypeScore=148.9728;InbreedingCoeff=0.0867;MQ=66.68;MQ0=7;MQRankSum=-13.937;QD=30.91;ReadPosRankSum=7.097;VQSLOD=4.2101;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:4,8:13:10.78:349,0,11	0/0:6,0:6:18.06:0,18,645	0/0:50,0:26:65.54:0,66,1277	0/0:36,0:20:45.51:0,46,938	0/1:7,9:16:37.20:417,0,37	0/0:28,0:28:81.28:0,81,2829	0/0:17,0:17:51.16:0,51,1706	0/0:31,0:31:93.31:0,93,2828	0/1:4,3:7:53.95:125,0,54	1/1:2,6:8:1.33:269,1,0	0/1:5,7:12:14.33:265,0,14	0/1:4,10:14:5.89:487,0,6	0/1:5,7:12:29.97:306,0,30	1/1:3,12:15:44.79:657,45,0	0/0:19,0:19:57.20:0,57,2037	1/1:2,13:16:33.09:673,33,0	0/0:20,0:20:60.19:0,60,1934	0/0:19,0:19:56.68:0,57,1574	0/1:4,9:13:22.87:398,0,23	0/1:4,11:15:40.11:480,0,40	0/1:3,2:5:14.51:83,0,15	1/1:1,7:8:24.08:366,24,0	1/1:6,4:10:22.95:346,23,0	0/1:6,5:11:63.05:153,0,63	1/1:4,11:15:2.21:573,2,0	0/1:5,12:17:30.16:563,0,30	0/1:9,11:20:71.65:506,0,72	0/0:17,0:17:51.18:0,51,1836
chr10	93036377	.	A	AGT	19076.97	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-12.694;DP=574;FS=2.961;HRun=0;HaplotypeScore=66.9598;InbreedingCoeff=0.9974;MQ=82.24;MQ0=0;MQRankSum=-5.749;QD=49.68;ReadPosRankSum=4.218;VQSLOD=5.6674;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:38:99:1970,102,0	0/0:5,0:5:15.05:0,15,230	0/0:20,0:20:51.16:0,51,733	0/0:14,0:14:42.14:0,42,604	1/1:1,19:21:45.15:868,45,0	0/0:19,0:19:57.18:0,57,851	0/0:19,0:19:57.19:0,57,870	0/0:24,0:24:69.23:0,69,1057	1/1:0,13:13:33.11:637,33,0	1/1:1,28:30:84.29:1573,84,0	1/1:0,14:15:39.13:753,39,0	1/1:0,18:18:45.15:862,45,0	1/1:3,20:23:54.19:1042,54,0	1/1:0,20:20:57.20:1100,57,0	0/0:18,0:18:51.17:0,51,781	1/1:2,14:16:42.14:807,42,0	0/0:27,0:27:81.25:0,81,1199	0/0:34,0:34:93.24:0,93,1398	1/1:2,20:22:66.23:1275,66,0	1/1:0,17:17:48.16:926,48,0	1/1:4,32:36:84.29:1601,84,0	1/1:1,14:17:36.12:689,36,0	1/1:0,17:17:42.14:811,42,0	1/1:3,20:23:57.20:1092,57,0	1/1:0,17:17:51.17:985,51,0	1/1:1,26:27:75.26:1448,75,0	1/1:0,14:14:33.11:637,33,0	0/0:10,0:10:30.10:0,30,458
chr10	93036513	.	GT	G	1339.60	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-5.149;DP=539;FS=11.809;HRun=2;HaplotypeScore=96.4053;InbreedingCoeff=0.9897;MQ=92.03;MQ0=0;MQRankSum=-0.347;QD=31.15;ReadPosRankSum=0.937;VQSLOD=2.1774;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,1999	0/0:7,0:7:21.07:0,21,315	0/0:25,0:25:72.22:0,72,1040	0/0:23,0:23:58.09:0,58,826	0/0:31,0:31:75.20:0,75,1080	1/1:0,17:17:48.16:623,48,0	1/1:0,19:19:51.17:662,51,0	0/0:22,0:22:66.21:0,66,969	0/0:18,0:18:54.17:0,54,790	0/0:16,0:16:48.16:0,48,702	0/0:15,0:15:42.14:0,42,629	0/0:12,0:12:33.11:0,33,494	0/0:18,0:18:54.18:0,54,809	0/0:18,0:18:54.18:0,54,809	0/0:14,0:14:42.12:0,42,590	0/0:19,0:19:54.18:0,54,807	0/0:30,0:30:90.30:0,90,1342	0/0:29,0:29:84.28:0,84,1259	0/0:23,0:22:69.23:0,69,1035	0/0:15,0:15:42.14:0,42,629	0/0:33,0:33:99:0,99,1463	0/0:6,0:6:18.06:0,18,270	0/0:12,0:12:33.11:0,33,490	0/0:17,0:17:51.17:0,51,764	0/0:15,0:15:42.05:0,42,562	0/0:19,0:19:57.18:0,57,834	0/0:13,0:13:39.09:0,39,560	1/1:0,7:7:15.05:195,15,0
chr10	93036705	.	GTGCA	G	17793.72	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=2.164;DP=627;FS=23.721;HRun=0;HaplotypeScore=118.3288;InbreedingCoeff=0.9053;MQ=75.87;MQ0=0;MQRankSum=-6.652;QD=41.28;ReadPosRankSum=5.703;VQSLOD=3.4439;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,61:61:99:2124,108,0	0/0:7,0:7:18.02:0,18,448	0/0:15,0:15:39.13:0,39,1007	0/0:12,0:12:26.86:0,27,558	1/1:1,16:17:27.09:552,27,0	0/0:19,0:19:8.17:0,8,800	0/1:37,0:37:8.65:9,0,1498	0/0:36,0:36:77.30:0,77,1645	1/1:0,31:31:78.06:1561,78,0	1/1:0,16:16:48.13:948,48,0	1/1:1,7:8:15.05:298,15,0	1/1:0,18:18:42.14:878,42,0	1/1:0,33:33:84.29:1741,84,0	1/1:0,30:30:72.25:1503,72,0	0/0:24,0:24:72.22:0,72,1878	1/1:0,13:13:33.11:686,33,0	0/0:47,0:47:99:0,135,3497	0/0:28,0:28:84.27:0,84,2368	1/1:0,18:18:50.88:931,51,0	1/1:0,14:14:36.12:753,36,0	1/1:0,51:51:96.59:1957,97,0	1/1:0,8:8:12.04:251,12,0	1/1:0,6:6:12.04:251,12,0	1/1:0,25:25:47.75:1003,48,0	1/1:0,9:9:21.07:439,21,0	1/1:0,19:19:57.14:1105,57,0	1/1:0,17:17:38.87:805,39,0	0/0:8,0:8:24.08:0,24,409
chr10	93036956	.	G	GC	2015.55	PASS	AB=0.909;AC=35;AF=0.673;AN=52;BaseQRankSum=5.434;DP=138;FS=0.000;HRun=2;HaplotypeScore=21.0837;InbreedingCoeff=0.6409;MQ=56.87;MQ0=5;MQRankSum=-1.989;QD=24.88;ReadPosRankSum=1.243;VQSLOD=3.1597;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:11:18.06:258,18,0	./.	0/0:7,0:2:6.02:0,6,69	0/0:6,0:3:8.92:0,9,85	1/1:2,1:3:6.01:70,6,0	0/1:9,1:9:21.99:22,0,202	0/0:14,0:13:24.07:0,24,297	0/0:9,0:8:24.02:0,24,266	1/1:0,4:4:12.04:173,12,0	1/1:0,2:2:6.02:86,6,0	1/1:0,3:3:6.02:86,6,0	1/1:0,4:4:12.04:172,12,0	1/1:1,4:5:9.03:129,9,0	1/1:0,6:6:18.06:258,18,0	0/0:9,0:8:21.05:0,21,247	./.	0/0:6,0:6:12:0,12,131	0/0:4,0:3:9.03:0,9,110	1/1:3,4:5:12.04:173,12,0	1/1:0,1:1:3.01:43,3,0	1/1:1,4:4:9.03:130,9,0	1/1:0,3:3:6.02:80,6,0	1/1:0,2:2:6.02:86,6,0	1/1:0,5:5:9.03:129,9,0	1/1:0,4:4:6.02:85,6,0	1/1:0,1:1:3.01:43,3,0	1/1:1,4:5:12.04:172,12,0	0/0:2,0:1:3.01:0,3,37
chr10	93037620	.	G	GC	16671.05	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=15.762;DP=721;FS=30.101;HRun=0;HaplotypeScore=140.1061;InbreedingCoeff=0.9991;MQ=96.19;MQ0=0;MQRankSum=-4.357;QD=35.32;ReadPosRankSum=6.977;VQSLOD=2.4282;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,41:43:99:1613,121,0	0/0:7,0:7:21.07:0,21,293	0/0:37,0:37:43.41:0,43,1022	0/0:38,0:39:75.83:0,76,1093	1/1:2,26:28:66.13:835,66,0	0/0:23,0:23:63.21:0,63,868	0/0:23,0:23:66.22:0,66,917	0/0:33,0:33:96.30:0,96,1311	1/1:1,22:23:59.75:799,60,0	1/1:3,21:24:64.09:838,64,0	1/1:0,10:10:25.23:316,25,0	1/1:1,22:23:51.97:708,52,0	1/1:0,28:28:84.21:1102,84,0	1/1:3,28:31:83.87:1106,84,0	0/0:31,0:31:90.30:0,90,1251	1/1:0,32:32:78.28:1109,78,0	0/0:24,0:24:72.24:0,72,1007	0/0:17,0:17:51.17:0,51,713	1/1:1,27:28:77.93:1024,78,0	1/1:0,11:11:32.84:405,33,0	1/1:1,48:49:99:1804,135,0	1/1:1,26:27:63.21:842,63,0	1/1:1,16:17:47.12:617,47,0	1/1:1,37:38:99:1435,108,0	1/1:1,13:14:33.11:442,33,0	1/1:2,21:23:63.35:831,63,0	1/1:1,22:22:63.21:845,63,0	0/0:15,0:15:45.15:0,45,628
chr10	93039252	.	AGGGGAGG	A	632.58	PASS	AC=6;AF=0.500;AN=12;BaseQRankSum=3.742;DP=72;FS=0.000;HRun=0;HaplotypeScore=22.8269;MQ=17.97;MQ0=44;MQRankSum=-0.718;QD=42.17;ReadPosRankSum=2.003;VQSLOD=2.6092;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:2:3.01:0,3,115	./.	./.	./.	1/1:2,5:5:15.05:362,15,0	1/1:2,1:1:3.01:72,3,0	0/0:10,0:9:18.06:0,18,689	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/0:4,0:4:9.03:0,9,289	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:1,4:4:12.04:288,12,0
chr10	93039348	.	A	AG	265.70	PASS	AC=2;AF=0.083;AN=24;BaseQRankSum=-4.402;DP=101;FS=8.654;HRun=0;HaplotypeScore=25.4268;InbreedingCoeff=0.6373;MQ=65.20;MQ0=14;MQRankSum=0.371;QD=17.71;ReadPosRankSum=-0.355;VQSLOD=4.8390;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:3,0:2:5.99:0,6,63	0/0:13,0:7:17.93:0,18,158	0/0:8,0:2:0:0,0,0	./.	0/0:11,0:11:32.59:0,33,221	0/0:8,0:7:14.90:0,15,126	1/1:3,12:15:33.83:350,34,0	./.	./.	./.	./.	./.	./.	0/0:3,0:3:6.01:0,6,68	./.	0/0:6,0:5:14.91:0,15,169	0/0:13,0:13:32.74:0,33,316	./.	./.	./.	./.	0/0:1,0:1:0:0,0,0	./.	./.	./.	0/0:1,0:1:0.89:0,1,2	0/0:9,0:8:23.78:0,24,165
chr10	93040011	.	A	AT	13447.26	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-3.743;DP=503;FS=3.666;HRun=0;HaplotypeScore=58.4192;InbreedingCoeff=0.9985;MQ=77.18;MQ0=0;MQRankSum=0.989;QD=40.02;ReadPosRankSum=2.413;VQSLOD=5.4616;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:57.19:903,57,0	0/0:8,0:8:24.08:0,24,333	0/0:16,0:16:38.74:0,39,433	0/0:21,0:21:42.92:0,43,389	1/1:0,28:28:81.21:1213,81,0	0/0:17,0:17:51.16:0,51,694	0/0:19,0:19:57.17:0,57,761	0/0:28,0:28:84.24:0,84,1116	1/1:0,11:11:24.08:381,24,0	1/1:2,19:21:54.16:797,54,0	1/1:0,19:19:51.17:804,51,0	1/1:0,16:16:33.11:519,33,0	1/1:1,20:21:45.15:711,45,0	1/1:0,21:21:60.20:942,60,0	0/0:11,0:11:30.10:0,30,411	1/1:0,11:11:30.10:476,30,0	0/0:24,0:24:72.22:0,72,980	0/0:12,0:12:36.03:0,36,442	1/1:0,20:20:60.11:801,60,0	1/1:0,16:16:36.07:540,36,0	1/1:0,25:25:72.25:1138,72,0	1/1:0,15:15:42.14:647,42,0	1/1:1,8:9:21.07:324,21,0	1/1:0,16:16:39.13:618,39,0	1/1:2,13:15:39.12:583,39,0	1/1:1,17:18:51.15:788,51,0	1/1:1,29:31:81.27:1261,81,0	0/0:11,0:11:33.08:0,33,424
chr10	93040385	.	TTCTC	T	1590.34	PASS	AB=0.500;AC=31;AF=0.620;AN=50;BaseQRankSum=6.171;DP=201;FS=5.094;HRun=0;HaplotypeScore=56.3954;InbreedingCoeff=0.6367;MQ=96.86;MQ0=2;MQRankSum=-6.613;QD=24.47;ReadPosRankSum=1.172;VQSLOD=2.4195;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:3.01:45,3,0	0/0:2,0:2:6.02:0,6,158	0/0:11,0:9:3.75:0,4,140	0/0:23,0:18:7.71:0,8,218	1/1:1,4:4:3.01:55,3,0	0/0:5,0:5:12.04:0,12,310	0/0:2,0:2:6.02:0,6,158	0/0:45,0:45:99:0,126,3110	1/1:1,1:2:3.01:55,3,0	1/1:3,2:5:5.64:109,6,0	./.	1/1:0,3:3:3.01:55,3,0	./.	1/1:0,3:3:3.01:55,3,0	./.	1/1:1,2:3:6:80,6,0	0/0:10,0:10:30.10:0,30,757	0/0:10,0:10:24.08:0,24,634	1/1:2,2:4:9.03:147,9,0	1/1:0,5:5:9.03:165,9,0	1/1:0,3:3:6.02:110,6,0	1/1:0,2:2:6.02:110,6,0	1/1:1,0:1:3.01:55,3,0	0/1:0,3:3:0:0,0,0	1/1:1,9:10:15.05:276,15,0	1/1:1,6:7:18.06:311,18,0	1/1:0,6:6:8.99:130,9,0	0/0:22,0:22:57.18:0,57,1376
chr10	93040411	.	T	TAG	1142.47	PASS	AB=0.774;AC=28;AF=0.560;AN=50;BaseQRankSum=7.506;DP=215;FS=0.774;HRun=0;HaplotypeScore=73.3114;InbreedingCoeff=0.6226;MQ=101.37;MQ0=3;MQRankSum=-6.147;QD=11.54;ReadPosRankSum=-2.564;VQSLOD=3.0143;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:1,3:4:0:0,0,0	0/0:1,0:1:3.01:0,3,46	0/0:17,0:10:9.91:0,10,81	0/1:39,0:27:0.92:1,0,138	1/1:1,6:7:3:36,3,0	0/0:4,0:4:9.03:0,9,127	0/0:2,0:2:6.01:0,6,71	0/0:45,0:45:99:0,115,1862	1/1:1,3:4:6.02:73,6,0	1/1:4,2:6:14.03:154,14,0	0/0:1,2:3:0:0,0,0	1/1:2,1:3:3.01:36,3,0	./.	1/1:0,1:1:3.01:36,3,0	0/0:1,0:1:3.01:0,3,46	1/1:1,2:3:3.01:37,3,0	0/0:8,0:8:24.08:0,24,364	0/0:9,0:9:27.09:0,27,412	1/1:2,1:3:8.91:96,9,0	1/1:0,3:3:9.03:106,9,0	1/1:1,2:3:6.02:75,6,0	1/1:0,2:2:6.02:71,6,0	./.	./.	1/1:4,5:9:12.04:145,12,0	1/1:0,6:6:18.06:316,18,0	1/1:2,3:5:9.03:126,9,0	0/0:21,0:21:48.63:0,49,705
chr10	93040454	.	TAC	T	310.92	PASS	AC=10;AF=0.385;AN=26;BaseQRankSum=4.425;DP=140;FS=2.920;HRun=0;HaplotypeScore=51.4934;InbreedingCoeff=0.5687;MQ=48.27;MQ0=1;MQRankSum=-4.425;QD=17.27;ReadPosRankSum=2.655;VQSLOD=3.1430;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,2:4:3.01:42,3,0	./.	./.	0/0:7,0:1:3.01:0,3,39	./.	./.	0/0:1,0:1:2.99:0,3,24	0/0:39,0:39:99:0,108,1615	./.	1/1:2,2:4:0.37:112,0,0	./.	./.	./.	./.	0/0:1,0:1:3.01:0,3,55	./.	0/0:9,0:9:24.05:0,24,406	0/0:12,0:12:33.06:0,33,526	1/1:3,2:4:9:99,9,0	./.	./.	./.	0/0:1,0:1:0:0,0,0	./.	./.	1/1:0,3:3:9.03:123,9,0	1/1:0,2:2:3.01:43,3,0	0/0:15,0:15:26.71:0,27,285
chr10	93040466	.	C	CAT	160.05	PASS	AB=1.000;AC=3;AF=0.115;AN=26;BaseQRankSum=3.012;DP=143;FS=10.100;HRun=0;HaplotypeScore=51.2855;InbreedingCoeff=0.4041;MQ=43.04;MQ0=4;MQRankSum=-3.655;QD=8.89;ReadPosRankSum=-0.012;VQSLOD=1.7529;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:4:2.92:0,3,17	./.	0/0:3,0:1:3.01:0,3,40	./.	./.	./.	0/0:1,0:1:2.90:0,3,16	0/0:44,0:42:90.25:0,90,1130	./.	0/0:3,0:3:5.99:0,6,51	./.	./.	./.	./.	0/0:1,0:1:3.01:0,3,40	./.	0/0:8,0:8:21.06:0,21,264	0/0:11,0:11:24.08:0,24,319	0/0:4,0:3:6.84:0,7,46	./.	./.	./.	0/1:1,0:1:0:0,0,0	./.	./.	0/0:1,0:3:0.47:0,0,1	0/0:3,0:3:2.80:0,3,26	1/1:5,12:17:17.93:242,18,0
chr10	93040961	.	T	TTGAAGTAAA	41357.68	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-1.130;DP=653;FS=6.468;HRun=0;HaplotypeScore=170.7324;InbreedingCoeff=0.9990;MQ=82.13;MQ0=0;MQRankSum=-19.508;QD=102.88;ReadPosRankSum=1.215;VQSLOD=5.1612;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,18:35:63.22:3034,63,0	0/0:8,0:8:24.07:0,24,668	0/0:25,0:25:69.13:0,69,1972	0/0:28,0:28:75.03:0,75,1916	1/1:6,6:13:27.07:1052,27,0	0/0:20,0:20:60.21:0,60,1821	0/0:30,0:30:90.31:0,90,2573	0/0:34,0:34:99:0,99,2747	1/1:9,17:26:66.19:2872,66,0	1/1:11,23:36:96.33:4347,96,0	1/1:2,7:9:27.09:1234,27,0	1/1:8,18:28:63.22:2814,63,0	1/1:5,8:18:33.58:1439,34,0	1/1:9,16:27:58.61:2622,59,0	0/0:30,0:30:87.30:0,87,2665	1/1:8,17:25:66.22:2951,66,0	0/0:28,0:28:81.28:0,81,2427	0/0:23,0:23:63.17:0,63,1777	1/1:14,12:28:69.21:2579,69,0	1/1:2,11:14:39.13:1867,39,0	1/1:8,13:23:45.15:1943,45,0	1/1:6,7:13:39.13:1501,39,0	1/1:3,9:12:30.10:1345,30,0	1/1:10,17:29:57.15:2284,57,0	1/1:6,16:23:57.19:2470,57,0	1/1:6,4:11:24.04:884,24,0	1/1:4,25:31:90.31:4120,90,0	0/0:25,0:25:75.24:0,75,2188
chr10	93041105	.	T	TC	21055.07	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=15.033;DP=734;FS=2.401;HRun=0;HaplotypeScore=119.4284;InbreedingCoeff=0.9991;MQ=88.70;MQ0=0;MQRankSum=-6.428;QD=43.32;ReadPosRankSum=3.723;VQSLOD=4.3385;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:78.27:1246,78,0	0/0:8,0:8:21.07:0,21,294	0/0:29,0:29:87.26:0,87,1173	0/0:28,0:29:75.22:0,75,1022	1/1:0,20:20:51.17:815,51,0	0/0:23,0:23:69.21:0,69,933	0/0:32,0:32:96.32:0,96,1336	0/0:26,0:26:72.23:0,72,978	1/1:0,24:24:69.24:1102,69,0	1/1:0,26:26:75.26:1198,75,0	1/1:1,14:15:42.14:670,42,0	1/1:1,31:32:81.28:1294,81,0	1/1:0,20:20:54.18:863,54,0	1/1:1,32:33:78.27:1237,78,0	0/0:39,0:38:99:0,117,1636	1/1:1,20:21:54.18:862,54,0	0/0:28,0:28:84.27:0,84,1158	0/0:20,0:20:60.12:0,60,791	1/1:0,18:18:51.17:815,51,0	1/1:0,19:19:51.17:814,51,0	1/1:3,71:74:99:3261,205,0	1/1:0,19:19:57.19:911,57,0	1/1:0,10:10:24.08:383,24,0	1/1:0,32:32:90.31:1438,90,0	1/1:0,19:19:57.19:911,57,0	1/1:1,34:35:99:1577,102,0	1/1:1,36:38:99:1658,105,0	0/0:14,0:14:42.14:0,42,585
chr10	93041698	.	AC	A	20052.79	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=20.558;DP=778;FS=0.279;HRun=1;HaplotypeScore=162.4845;InbreedingCoeff=1.0000;MQ=91.24;MQ0=0;MQRankSum=-3.757;QD=38.27;ReadPosRankSum=5.301;VQSLOD=4.1656;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,56:56:99:2179,157,0	0/0:14,0:14:42.14:0,42,669	0/0:30,0:30:83.46:0,83,1328	0/0:30,0:30:83.97:0,84,1214	1/1:0,31:31:87.25:1192,87,0	0/0:18,0:18:54.17:0,54,836	0/0:23,0:23:69.22:0,69,1077	0/0:45,0:45:99:0,126,1914	1/1:0,19:19:51.17:712,51,0	1/1:0,41:41:99:1582,120,0	1/1:0,22:22:63.17:858,63,0	1/1:0,30:30:84.28:1173,84,0	1/1:0,27:27:72.24:1006,72,0	1/1:0,25:25:69.23:961,69,0	0/0:33,0:33:99:0,99,1526	1/1:0,30:30:84.28:1173,84,0	0/0:31,0:31:93.22:0,93,1358	0/0:12,0:12:36.12:0,36,573	1/1:0,21:21:63.15:824,63,0	1/1:0,33:33:90.14:1170,90,0	1/1:0,26:26:75.25:1041,75,0	1/1:0,34:34:96.32:1340,96,0	1/1:0,26:26:66.22:922,66,0	1/1:0,31:31:84.28:1173,84,0	1/1:0,25:25:60.20:838,60,0	1/1:0,27:27:81.25:1113,81,0	1/1:0,20:20:57.19:796,57,0	0/0:18,0:18:54.15:0,54,813
chr10	93042015	.	AT	A	3515.02	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.326;DP=594;FS=6.596;HRun=9;HaplotypeScore=69.9077;InbreedingCoeff=0.9784;MQ=75.17;MQ0=0;MQRankSum=-1.536;QD=23.75;ReadPosRankSum=3.801;VQSLOD=4.5407;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1133	0/0:9,0:9:24.07:0,24,277	0/0:15,1:16:8.97:0,9,343	0/0:8,0:8:9.03:0,9,101	0/0:30,0:30:84.25:0,84,967	0/0:29,0:29:78.21:0,78,881	0/0:13,0:13:31.33:0,31,349	0/0:28,0:27:54.14:0,54,607	0/0:20,0:20:54.16:0,54,623	0/0:25,0:25:63.18:0,63,721	0/0:16,0:16:36.07:0,36,401	1/1:0,18:18:54.03:494,54,0	1/1:2,14:16:39.02:357,39,0	1/1:0,23:23:63.03:577,63,0	0/0:19,0:19:54.16:0,54,623	0/0:17,0:17:48.14:0,48,554	0/0:28,1:28:44.75:0,45,769	0/0:20,0:20:51.11:0,51,574	0/0:19,0:19:48.14:0,48,554	0/0:20,1:21:48.13:0,48,544	0/0:26,0:26:60.15:0,60,674	1/1:4,28:32:78.03:714,78,0	1/1:2,18:20:54.50:495,55,0	1/1:2,18:20:45.02:412,45,0	1/1:1,18:19:51.03:467,51,0	0/0:22,0:22:63.17:0,63,715	0/0:20,0:20:51.14:0,51,578	0/0:24,0:24:57.17:0,57,658
chr10	93042371	.	G	GT	11441.97	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=14.412;DP=593;FS=0.351;HRun=0;HaplotypeScore=179.6744;InbreedingCoeff=0.9986;MQ=81.13;MQ0=0;MQRankSum=-11.837;QD=25.65;ReadPosRankSum=3.550;VQSLOD=4.5910;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,30:34:75.04:702,75,0	0/0:16,0:16:48.15:0,48,655	0/0:23,0:23:66.04:0,66,801	0/0:22,0:22:56.27:0,56,616	1/1:0,26:27:72.93:666,73,0	1/1:0,12:12:36.03:347,36,0	1/1:5,23:28:57.74:695,58,0	1/1:1,18:21:60.03:554,60,0	1/1:1,19:20:59.97:537,60,0	1/1:2,15:17:28.74:396,29,0	1/1:0,9:9:26.97:239,27,0	1/1:1,25:26:75.01:713,75,0	1/1:2,19:21:56.95:534,57,0	1/1:2,19:21:62.91:568,63,0	0/0:42,0:42:99:0,120,1657	1/1:2,17:19:54.05:530,54,0	0/0:26,0:26:72.24:0,72,1005	0/0:18,0:18:54.18:0,54,751	1/1:1,14:15:42.05:411,42,0	1/1:2,13:15:44.99:409,45,0	1/1:4,29:33:67.35:800,67,0	1/1:0,15:16:44.77:381,45,0	1/1:2,9:11:29.76:246,30,0	1/1:0,23:23:54.04:525,54,0	1/1:0,8:8:20.98:182,21,0	1/1:1,30:31:93.04:924,93,0	1/1:1,23:24:68.96:649,69,0	1/1:1,14:15:45.02:436,45,0
chr10	93042372	.	G	GC	11524.35	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=15.257;DP=593;FS=2.060;HRun=0;HaplotypeScore=180.2219;InbreedingCoeff=0.9986;MQ=79.11;MQ0=0;MQRankSum=-8.630;QD=25.61;ReadPosRankSum=2.711;VQSLOD=4.6463;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,30:34:81.02:744,81,0	0/0:15,0:15:45.15:0,45,626	0/0:21,0:21:60.05:0,60,736	0/0:21,0:21:56.29:0,56,629	1/1:1,26:27:74.60:698,75,0	1/1:0,12:12:36.05:358,36,0	1/1:6,23:29:84.06:813,84,0	1/1:3,18:21:57.01:510,57,0	1/1:1,19:20:57.90:524,58,0	1/1:3,15:18:50.93:470,51,0	1/1:0,9:9:27.01:252,27,0	1/1:0,25:25:74.99:723,75,0	1/1:2,19:21:56.97:535,57,0	1/1:1,19:20:59.92:545,60,0	0/0:42,0:42:99:0,123,1634	1/1:2,17:19:54.02:509,54,0	0/0:26,0:26:75.21:0,75,1025	0/0:18,0:18:54.18:0,54,749	1/1:2,14:16:45.03:431,45,0	1/1:3,13:16:41.95:381,42,0	1/1:3,29:32:81.06:783,81,0	1/1:1,15:16:44.84:382,45,0	1/1:2,9:11:25.95:200,26,0	1/1:0,23:23:54.08:537,54,0	1/1:1,8:9:20.97:183,21,0	1/1:1,30:31:89.95:872,90,0	1/1:1,23:24:68.50:639,69,0	1/1:3,14:17:42.08:436,42,0
chr10	93042775	.	AGAGAGC	A	975.42	PASS	AB=0.978;AC=24;AF=0.429;AN=56;BaseQRankSum=6.062;DP=635;FS=4.029;HRun=0;HaplotypeScore=175.3373;InbreedingCoeff=-0.1987;MQ=70.14;MQ0=28;MQRankSum=-1.682;QD=2.68;ReadPosRankSum=0.960;VQSLOD=2.5105;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:0.33:0,0,1	0/1:9,0:9:13.33:13,0,196	0/0:72,0:24:19.43:0,19,141	0/0:98,0:41:14.66:0,15,225	0/0:20,0:20:10.98:0,11,124	0/1:18,0:18:59.97:179,0,60	1/1:8,23:30:2.94:18,3,0	0/0:22,0:22:54.29:0,54,360	0/1:15,0:16:54.81:60,0,55	0/1:16,0:16:45.70:154,0,46	0/1:15,0:15:15.60:16,0,24	0/0:12,0:11:3.22:0,3,20	0/0:8,0:7:2.88:0,3,15	0/1:20,0:19:12.68:14,0,13	0/1:30,0:30:54.91:55,0,372	0/1:17,0:19:14.03:34,0,14	0/0:30,0:30:57.41:0,57,871	0/1:27,0:27:33.44:33,0,415	0/1:14,0:15:47.78:181,0,48	1/1:13,0:13:1.65:17,2,0	1/1:27,0:27:1.24:6,1,0	0/1:13,0:12:0:0,0,0	0/1:13,0:13:0:0,0,0	0/0:9,0:8:0:0,0,0	1/1:13,0:12:0.73:2,1,0	0/1:20,0:19:85.30:85,0,312	0/1:15,0:15:13.56:109,0,14	0/1:11,0:11:31.08:139,0,31
chr10	93042779	.	AGCGC	A	1702.47	PASS	AB=0.914;AC=29;AF=0.537;AN=54;BaseQRankSum=8.785;DP=578;FS=3.729;HRun=0;HaplotypeScore=152.6540;InbreedingCoeff=0.5225;MQ=72.86;MQ0=26;MQRankSum=-5.638;QD=6.92;ReadPosRankSum=-2.725;VQSLOD=2.2698;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:19:6.41:41,6,0	0/0:7,0:7:20.43:0,20,275	0/0:73,0:25:7.27:0,7,299	0/0:99,0:42:56.02:0,56,673	0/1:17,0:17:9.93:64,0,10	0/1:15,0:15:18.81:29,0,19	0/0:28,0:28:0.47:0,0,1	0/0:25,0:25:63.15:0,63,883	1/1:14,0:14:15.43:156,15,0	1/1:2,10:13:12.21:319,12,0	1/1:14,0:14:9.72:67,10,0	1/1:4,7:10:6.18:33,6,0	./.	1/1:3,12:15:6.45:59,6,0	0/0:29,0:29:52.51:0,53,766	1/1:15,0:16:11.95:117,12,0	0/0:25,0:25:54.70:0,55,1015	0/0:22,0:22:50.99:0,51,690	1/1:12,0:13:10.45:320,10,0	1/1:11,0:11:3.48:39,3,0	1/1:23,0:23:6.32:34,6,0	1/1:10,0:9:5.93:40,6,0	0/1:9,0:9:0:0,0,0	0/0:2,0:4:0:0,0,0	0/1:3,9:11:0.35:0,0,0	0/1:19,0:18:49.63:280,0,50	1/1:10,0:12:21.07:279,21,0	0/0:11,0:11:2.79:0,3,25
chr10	93042780	.	GCGCT	G	1778.32	PASS	AB=0.852;AC=29;AF=0.537;AN=54;BaseQRankSum=8.765;DP=555;FS=1.188;HRun=0;HaplotypeScore=146.1693;InbreedingCoeff=0.7147;MQ=74.80;MQ0=25;MQRankSum=-6.849;QD=8.47;ReadPosRankSum=-4.594;VQSLOD=1.3731;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:19:6.41:41,6,0	0/0:7,0:7:21.07:0,21,427	0/0:73,0:25:7.88:0,8,412	0/0:100,0:43:53.47:0,53,892	1/1:17,0:17:15.71:99,16,0	0/0:14,0:14:17.08:0,17,185	0/0:26,0:26:2.84:0,3,14	0/0:26,0:26:56.33:0,56,1258	1/1:7,7:13:15.43:161,15,0	1/1:13,0:13:20.94:328,21,0	1/1:10,0:11:9.72:67,10,0	1/1:10,0:9:6.18:33,6,0	./.	1/1:12,0:12:6.45:59,6,0	0/0:29,0:29:68.88:0,69,1310	1/1:6,7:13:11.95:117,12,0	0/0:25,0:25:56.45:0,56,1301	0/0:22,0:22:59.99:0,60,1065	1/1:12,0:12:25.79:340,26,0	1/1:10,0:10:3.48:39,3,0	1/1:23,0:23:7.90:38,8,0	1/1:7,0:8:5.93:40,6,0	0/1:7,0:7:0:0,0,0	0/0:4,0:3:0:0,0,0	0/1:12,0:11:0.35:0,0,0	0/1:3,12:14:7.14:323,0,7	1/1:12,0:12:21.54:280,22,0	0/0:11,0:11:21.81:0,22,173
chr10	93042782	.	GCT	G	734.06	PASS	AB=0.848;AC=31;AF=0.574;AN=54;BaseQRankSum=7.201;DP=518;FS=3.114;HRun=0;HaplotypeScore=132.8294;InbreedingCoeff=0.6207;MQ=77.53;MQ0=22;MQRankSum=-5.153;QD=3.90;ReadPosRankSum=-0.112;VQSLOD=2.9776;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:18:0.50:2,0,0	0/0:7,0:7:21.01:0,21,255	0/0:73,0:25:25.77:0,26,314	0/0:101,0:44:71.41:0,71,737	0/0:12,0:12:0.80:0,1,3	1/1:13,1:14:2.94:18,3,0	0/0:24,0:24:2.95:0,3,24	0/0:28,0:28:71.25:0,71,967	1/1:10,1:11:8.94:74,9,0	1/1:11,0:12:28.94:180,29,0	1/1:10,0:10:1.31:17,1,0	1/1:7,0:7:2.90:16,3,0	./.	1/1:12,0:12:2.96:20,3,0	0/0:28,0:28:68.82:0,69,876	1/1:11,0:11:5.90:37,6,0	0/0:25,0:25:59.54:0,60,874	0/0:22,0:22:59.77:0,60,695	1/1:9,0:9:23.77:170,24,0	1/1:8,0:8:2.96:19,3,0	1/1:20,0:20:5.82:22,6,0	0/1:7,0:7:0:0,0,0	0/1:1,5:6:0:0,0,0	0/0:3,0:3:0:0,0,0	0/1:9,0:9:0:0,0,0	1/1:14,0:13:14.86:178,15,0	1/1:10,0:10:20.74:137,21,0	1/1:8,0:8:1.60:6,2,0
chr10	93042783	.	CTAGCGA	C	670.92	PASS	AB=0.929;AC=18;AF=0.333;AN=54;BaseQRankSum=8.477;DP=513;FS=0.000;HRun=0;HaplotypeScore=148.5579;InbreedingCoeff=0.4685;MQ=78.06;MQ0=21;MQRankSum=-6.687;QD=5.64;ReadPosRankSum=-1.275;VQSLOD=2.0484;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:9.87:0,10,58	0/0:7,0:7:21.07:0,21,579	0/0:73,0:25:38.87:0,39,613	0/0:102,0:45:56.45:0,56,990	0/1:11,0:11:2.05:2,0,13	0/0:14,0:14:27.08:0,27,429	0/0:24,0:24:6.02:0,6,108	0/0:26,0:26:66.02:0,66,1923	1/1:11,0:11:10.67:100,11,0	1/1:12,0:12:17.62:165,18,0	0/1:9,0:9:8.03:22,0,8	1/1:7,0:7:2.30:4,2,0	./.	1/1:12,0:12:4.80:24,5,0	0/0:29,0:29:71.95:0,72,1906	1/1:11,0:11:7.50:44,8,0	0/0:24,0:24:63.16:0,63,1856	0/0:22,0:22:63.04:0,63,1555	1/1:9,0:9:22.93:207,23,0	0/1:2,6:8:11.98:38,0,12	0/0:20,0:20:15.68:0,16,110	0/0:7,0:7:10.18:0,10,69	0/1:5,0:5:0:0,0,0	0/0:3,0:3:0:0,0,0	0/0:9,0:9:0:0,0,0	0/1:14,0:13:59.14:111,0,59	0/1:10,0:10:11.11:119,0,11	0/0:8,0:8:24:0,24,353
chr10	93043732	.	C	CAAA	5439.16	PASS	AB=0.588;AC=33;AF=0.589;AN=56;BaseQRankSum=4.076;DP=595;FS=7.458;HRun=13;HaplotypeScore=120.8649;InbreedingCoeff=0.6283;MQ=68.40;MQ0=1;MQRankSum=-0.248;QD=12.14;ReadPosRankSum=-4.955;VQSLOD=1.2428;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:39:62.99:473,63,0	0/0:15,0:17:26.59:0,27,252	0/0:17,0:13:8.13:0,8,85	0/0:9,0:9:11.48:0,11,93	1/1:14,18:36:67.85:769,68,0	0/0:9,0:9:11.88:0,12,129	0/0:16,0:17:25.19:0,25,266	1/1:13,1:24:32.72:283,33,0	1/1:12,12:26:18.03:230,18,0	1/1:5,9:19:34.23:449,34,0	1/1:7,12:20:35.72:412,36,0	0/1:5,0:18:18.64:45,0,19	1/1:5,0:20:9.97:23,10,0	1/1:7,0:24:14.21:50,14,0	0/0:22,0:25:38.39:0,38,390	1/1:12,12:26:32.11:434,32,0	0/0:18,0:18:35.71:0,36,360	0/0:14,0:16:25.24:0,25,273	1/1:6,1:12:22.23:258,22,0	1/1:10,16:28:56.07:714,56,0	1/1:9,7:18:14.03:173,14,0	0/1:6,0:21:1.60:39,0,2	0/1:9,0:22:28.08:28,0,37	0/1:4,0:21:13.15:13,0,19	0/1:5,0:22:23.12:23,0,35	1/1:14,12:33:63.14:868,63,0	1/1:5,11:18:14:155,14,0	0/0:18,0:19:38.62:0,39,385
chr10	93045144	.	TGA	T	6953.92	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.184;DP=717;FS=0.327;HRun=0;HaplotypeScore=93.0994;InbreedingCoeff=0.9877;MQ=72.69;MQ0=4;MQRankSum=-1.262;QD=38.21;ReadPosRankSum=2.193;VQSLOD=6.6722;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,2439	0/0:6,0:6:15.05:0,15,280	0/0:34,0:32:90.23:0,90,1499	0/0:33,0:32:58.95:0,59,1356	0/0:32,0:32:96.32:0,96,1745	0/0:23,0:23:69.22:0,69,1249	0/0:28,0:28:75.24:0,75,1360	1/1:1,20:21:57.19:832,57,0	0/0:30,0:30:90.31:0,90,1659	0/0:32,0:32:87.29:0,87,1587	0/0:19,0:19:54.16:0,54,975	1/1:4,14:18:45.15:660,45,0	1/1:0,24:24:59.78:877,60,0	1/1:1,16:17:48.16:707,48,0	0/0:24,0:24:72.25:0,72,1321	0/0:25,0:25:75.24:0,75,1361	0/0:31,0:31:87.30:0,87,1611	0/0:24,0:24:72.25:0,72,1323	0/0:26,0:26:72.25:0,72,1337	0/0:14,0:14:36.12:0,36,672	0/0:47,0:47:99:0,135,2512	1/1:1,27:26:72.24:1050,72,0	1/1:0,18:17:45.15:663,45,0	1/1:0,37:36:93.31:1369,93,0	1/1:0,19:19:54.18:795,54,0	0/0:28,0:28:84.29:0,84,1563	0/0:29,0:29:84.24:0,84,1523	0/0:3,0:3:9.03:0,9,168
chr10	93045398	.	TC	T	18035.18	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=8.311;DP=751;FS=0.301;HRun=3;HaplotypeScore=77.3947;InbreedingCoeff=0.9993;MQ=86.77;MQ0=0;MQRankSum=-3.173;QD=33.84;ReadPosRankSum=6.395;VQSLOD=4.7532;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1568	0/0:13,0:13:39.12:0,39,539	0/0:29,0:29:84.25:0,84,1185	0/0:21,0:21:54.04:0,54,674	1/1:0,30:30:87.27:1078,87,0	1/1:1,21:22:57.18:706,57,0	1/1:2,32:34:87.27:1078,87,0	0/0:32,0:32:84.26:0,84,1133	1/1:0,28:28:75.24:929,75,0	1/1:0,28:28:81.24:991,81,0	1/1:1,20:21:54.17:669,54,0	1/1:1,27:28:72.23:891,72,0	1/1:0,27:27:72.23:890,72,0	1/1:0,22:22:57.18:707,57,0	0/0:27,0:27:78.25:0,78,1103	1/1:0,33:33:87.27:1078,87,0	0/0:37,0:37:99:0,108,1528	0/0:21,0:21:57.15:0,57,797	1/1:0,19:19:57.03:671,57,0	1/1:2,30:32:90.28:1115,90,0	1/1:2,39:41:99:1301,105,0	1/1:1,33:34:96.26:1169,96,0	1/1:1,19:20:51.16:632,51,0	1/1:1,25:26:75.24:930,75,0	1/1:0,18:18:54.17:669,54,0	1/1:0,28:28:84.26:1041,84,0	1/1:0,35:35:99:1227,99,0	1/1:0,7:7:21.07:260,21,0
chr10	93046886	.	TGAC	T	10101.20	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=12.613;DP=549;FS=0.000;HRun=0;HaplotypeScore=85.6820;InbreedingCoeff=0.9979;MQ=83.46;MQ0=0;MQRankSum=-7.756;QD=46.98;ReadPosRankSum=3.465;VQSLOD=6.6476;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.30:0,90,2137	0/0:6,0:6:18.06:0,18,410	0/0:17,0:17:48.16:0,48,1054	0/0:19,0:19:51.09:0,51,1167	0/0:22,0:22:66.21:0,66,1575	1/1:0,22:22:54.19:1006,54,0	1/1:0,19:19:42.14:783,42,0	1/1:0,20:20:60.16:1015,60,0	0/0:15,0:15:45.15:0,45,1097	0/0:23,0:23:69.23:0,69,1637	0/0:13,0:13:39.12:0,39,912	1/1:0,26:26:66.23:1230,66,0	1/1:0,18:18:51.17:951,51,0	1/1:0,28:28:74.98:1394,75,0	0/0:20,0:20:60.21:0,60,1475	0/0:8,0:8:24.08:0,24,592	0/0:32,0:32:96.33:0,96,2366	0/0:23,0:23:69.23:0,69,1620	0/0:19,0:19:57.19:0,57,1359	0/0:18,0:18:54.19:0,54,1330	0/0:31,0:31:93.32:0,93,2274	1/1:0,16:16:42.14:783,42,0	1/1:0,7:7:21.07:392,21,0	1/1:0,29:29:63.21:1149,63,0	1/1:0,18:18:39.13:727,39,0	0/0:21,0:21:63.21:0,63,1473	0/0:17,0:17:51.16:0,51,1207	1/1:0,12:12:36.12:671,36,0
chr10	93049001	.	A	AACACAC	4609.88	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=-3.169;DP=473;FS=0.000;HRun=0;HaplotypeScore=154.0777;InbreedingCoeff=0.6968;MQ=64.89;MQ0=3;MQRankSum=-5.217;QD=22.60;ReadPosRankSum=-4.746;VQSLOD=3.5375;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:28.73:29,0,277	0/0:10,0:10:30.09:0,30,613	0/0:15,0:9:17.98:0,18,237	0/1:16,0:7:2.87:3,0,119	0/0:32,0:32:78.63:0,79,661	1/1:17,0:16:18.06:533,18,0	1/1:12,0:12:6.02:140,6,0	1/1:12,13:26:54.14:1117,54,0	0/0:11,0:11:2.05:0,2,207	0/0:22,0:22:45:0,45,441	0/0:30,0:30:50.96:0,51,603	1/1:8,0:8:9.03:267,9,0	1/1:16,0:16:8.86:253,9,0	1/1:10,1:11:12.04:293,12,0	0/0:15,0:15:39.13:0,39,798	0/0:15,0:15:11.04:0,11,284	0/0:14,0:14:39.08:0,39,712	0/0:10,0:10:27.09:0,27,586	0/1:19,0:19:5.53:6,0,242	0/0:37,0:37:33.66:0,34,671	0/0:11,0:11:4.01:0,4,195	1/1:14,0:14:8.96:195,9,0	1/1:17,0:17:27.09:822,27,0	1/1:10,0:10:6.02:177,6,0	1/1:8,0:8:9.03:266,9,0	0/0:22,0:22:14.11:0,14,396	0/0:25,0:25:61.84:0,62,564	1/1:10,0:10:21.07:510,21,0
chr10	93049009	.	CAGAG	C	6649.85	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-0.237;DP=502;FS=6.869;HRun=0;HaplotypeScore=127.1329;InbreedingCoeff=0.9113;MQ=61.48;MQ0=6;MQRankSum=4.332;QD=27.82;ReadPosRankSum=2.877;VQSLOD=4.4399;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,10:19:33.11:533,33,0	0/0:10,0:10:23.82:0,24,501	0/0:17,0:10:12.04:0,12,186	0/0:18,0:8:6.62:0,7,96	1/1:5,25:33:69.49:928,69,0	0/0:5,0:19:23.91:0,24,388	0/0:4,0:14:3.01:0,3,51	0/0:19,0:19:30.10:0,30,457	1/1:1,8:10:24.08:370,24,0	1/1:7,13:22:45.12:650,45,0	1/1:8,21:29:54.13:846,54,0	0/0:4,0:13:13.29:0,13,196	0/0:0,0:15:9.03:0,9,155	0/0:6,0:12:17.58:0,18,167	0/0:11,0:13:35.59:0,36,718	1/1:4,7:13:27.08:398,27,0	0/0:12,0:15:38.60:0,39,811	0/0:9,0:10:26.81:0,27,539	1/1:11,9:19:24.02:357,24,0	1/1:14,21:35:53.09:775,53,0	1/1:3,9:12:18.06:293,18,0	0/0:2,0:19:9.01:0,9,122	0/0:6,0:27:33.11:0,33,539	0/0:2,0:10:6.02:0,6,103	0/0:0,0:13:9.03:0,9,151	1/1:6,14:20:42.14:673,42,0	1/1:4,22:26:51.17:828,51,0	0/0:4,0:18:33.11:0,33,546
chr10	93050848	.	AGGTGCGCGCGCGC	A	3009.70	PASS	AB=0.954;AC=19;AF=0.339;AN=56;BaseQRankSum=9.010;DP=416;FS=5.000;HRun=0;HaplotypeScore=177.2196;InbreedingCoeff=0.7826;MQ=71.99;MQ0=4;MQRankSum=-6.895;QD=21.97;ReadPosRankSum=2.094;VQSLOD=2.3225;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:15.04:0,15,399	0/0:2,0:2:6.02:0,6,105	0/0:10,0:11:17.22:0,17,266	0/0:12,0:9:13.86:0,14,235	0/0:19,0:19:45.02:0,45,1155	1/1:4,1:5:3.01:82,3,0	1/1:20,0:20:14.53:241,15,0	1/1:15,0:15:39.13:1150,39,0	0/0:6,0:6:18.06:0,18,598	0/0:16,0:15:45.15:0,45,1409	0/0:13,0:13:33.11:0,33,923	1/1:11,1:12:12.04:317,12,0	1/1:8,1:9:4.80:101,5,0	1/1:14,7:21:29.39:840,29,0	0/0:8,0:8:21.07:0,21,986	0/0:10,0:10:30.10:0,30,1022	0/0:30,0:30:87.21:0,87,4441	0/0:34,0:33:84:0,84,3988	0/0:19,0:19:51.18:0,51,1687	0/0:12,0:12:20.94:0,21,457	0/0:33,0:33:18.06:0,18,497	1/1:11,0:11:1.39:6,1,0	0/1:7,0:7:0:0,0,0	0/1:12,1:13:0:0,0,0	0/1:13,1:14:1.36:79,0,1	0/0:13,0:13:39.13:0,39,1331	0/0:11,0:11:16.70:0,17,491	1/1:9,1:10:14.07:374,14,0
chr10	93050851	.	TGCGCGCGCGC	T	3125.60	PASS	AC=16;AF=0.308;AN=52;BaseQRankSum=8.574;DP=394;FS=6.664;HRun=0;HaplotypeScore=145.5459;InbreedingCoeff=0.7965;MQ=65.30;MQ0=7;MQRankSum=-7.832;QD=32.56;ReadPosRankSum=2.028;VQSLOD=3.0820;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:30:11.89:0,12,214	0/0:6,0:4:6.01:0,6,143	0/0:8,0:8:11.87:0,12,152	0/0:9,0:6:2.84:0,3,64	0/0:17,0:17:33.10:0,33,638	1/1:1,4:5:3.01:101,3,0	1/1:6,14:20:12.01:227,12,0	1/1:0,13:13:39.12:1173,39,0	0/0:6,0:6:18.06:0,18,361	0/0:15,0:14:42.12:0,42,796	0/0:10,0:10:27.06:0,27,470	1/1:3,9:12:12.04:313,12,0	1/1:3,4:7:3.01:89,3,0	1/1:7,13:20:30.10:926,30,0	0/0:7,0:7:21.03:0,21,707	0/0:9,0:10:30.09:0,30,560	0/0:31,0:29:78.15:0,78,3257	0/0:33,0:32:78.14:0,78,2864	0/0:17,0:18:54.13:0,54,1024	0/0:5,0:11:12.03:0,12,238	0/0:35,0:34:18.04:0,18,389	./.	./.	0/0:5,9:14:0.42:0,0,1	1/1:1,9:10:3.01:100,3,0	0/0:12,0:12:36.06:0,36,791	0/0:12,0:12:16.81:0,17,278	1/1:3,6:8:12.04:372,12,0
chr10	93050859	.	CGCGTGT	C	2634.82	PASS	AB=1.000;AC=35;AF=0.700;AN=50;BaseQRankSum=3.668;DP=405;FS=1.275;HRun=0;HaplotypeScore=121.7728;InbreedingCoeff=0.6634;MQ=55.01;MQ0=20;MQRankSum=-2.852;QD=10.71;ReadPosRankSum=-1.136;VQSLOD=2.0446;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:30:5.91:99,6,0	0/0:6,0:3:6.02:0,6,156	0/0:3,0:3:3.01:0,3,32	0/0:7,0:4:2.04:0,2,6	1/1:11,1:11:14.97:121,15,0	1/1:5,0:5:2.99:24,3,0	1/1:15,0:15:5.85:35,6,0	1/1:14,0:14:35.62:210,36,0	1/1:9,0:9:17.99:202,18,0	1/1:18,0:17:31.90:331,32,0	1/1:11,0:10:23.78:181,24,0	1/1:12,0:11:8.91:78,9,0	1/1:5,0:5:3.01:41,3,0	1/1:20,0:20:28.45:226,28,0	0/0:5,0:5:14.93:0,15,262	1/1:10,0:11:26.93:268,27,0	0/0:32,0:29:71.73:0,72,1308	0/0:43,0:41:76.69:0,77,961	1/1:24,0:23:37.35:442,37,0	./.	0/0:12,28:36:3.01:0,3,78	./.	./.	0/1:11,0:11:0.01:0,0,0	1/1:11,0:10:3:28,3,0	1/1:13,1:14:11.92:401,12,0	1/1:2,10:12:2.59:14,3,0	1/1:11,0:8:11.82:94,12,0
chr10	93050893	.	TGTGTGTGTGTGTGTGCGCGCGCGC	T	2731.62	PASS	AB=1.000;AC=21;AF=0.420;AN=50;BaseQRankSum=6.082;DP=435;FS=2.840;HRun=0;HaplotypeScore=224.8574;InbreedingCoeff=0.6667;MQ=43.88;MQ0=33;MQRankSum=-6.382;QD=19.24;ReadPosRankSum=0.453;VQSLOD=2.7807;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:30.57:0,31,1274	0/0:12,0:9:21.07:0,21,1871	./.	./.	0/0:17,0:14:5.13:0,5,124	1/1:16,1:15:9.03:335,9,0	1/1:18,0:18:2.68:86,3,0	0/1:15,0:13:69.80:70,0,210	0/0:11,0:9:9.03:0,9,374	0/0:24,0:24:59.97:0,60,1858	0/0:6,0:5:3.01:0,3,50	1/1:9,1:9:6.02:272,6,0	1/1:8,1:8:11.95:308,12,0	1/1:11,7:18:22.32:1085,22,0	0/0:4,0:4:9.50:0,10,630	0/0:8,0:7:15.05:0,15,412	0/0:36,0:32:85.17:0,85,4962	0/0:37,0:35:66.19:0,66,4195	0/0:16,0:14:36.11:0,36,1024	./.	0/0:45,0:38:28.74:0,29,1286	1/1:7,0:6:2.44:6,2,0	1/1:15,0:14:2.24:5,2,0	1/1:12,1:13:1.70:3,2,0	1/1:9,1:9:3.01:175,3,0	0/0:22,0:21:50.25:0,50,1676	0/0:9,0:8:12.04:0,12,496	1/1:10,0:6:15.05:555,15,0
chr10	93050901	.	TGTGTGTGC	T	2185.60	PASS	AB=1.000;AC=36;AF=0.750;AN=48;BaseQRankSum=7.133;DP=429;FS=4.729;HRun=0;HaplotypeScore=138.4369;InbreedingCoeff=0.4527;MQ=44.08;MQ0=30;MQRankSum=-0.699;QD=6.68;ReadPosRankSum=1.260;VQSLOD=2.1196;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:39:38.67:337,39,0	0/0:13,0:10:23.97:0,24,565	./.	./.	1/1:5,10:14:2.94:18,3,0	1/1:18,0:16:6.41:56,6,0	1/1:19,0:19:2.87:17,3,0	0/1:15,0:13:16.11:20,0,16	1/1:13,0:11:6.02:116,6,0	1/1:22,0:22:19.61:335,20,0	./.	1/1:10,0:9:5.93:72,6,0	1/1:10,0:9:5.95:72,6,0	1/1:18,0:18:20.23:221,20,0	0/0:4,0:4:9.49:0,9,235	1/1:6,0:5:5.99:108,6,0	0/0:35,0:31:78.95:0,79,1408	0/0:40,0:38:69.77:0,70,1155	1/1:17,0:15:16.36:265,16,0	./.	0/1:43,0:36:96.28:158,0,96	1/1:6,0:6:0.47:1,0,0	1/1:15,0:14:1.83:4,2,0	0/1:14,0:14:0.03:0,0,0	1/1:9,0:8:3.01:42,3,0	1/1:6,13:18:29.45:350,29,0	0/1:9,0:8:0.54:23,0,1	1/1:10,0:6:14.62:120,15,0
chr10	93050903	.	TGTGTGC	T	2142.68	PASS	AB=1.000;AC=38;AF=0.792;AN=48;BaseQRankSum=6.718;DP=418;FS=1.334;HRun=0;HaplotypeScore=129.7652;InbreedingCoeff=0.5246;MQ=44.05;MQ0=30;MQRankSum=-0.277;QD=6.74;ReadPosRankSum=0.870;VQSLOD=2.6113;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,2:38:38.84:343,39,0	0/0:13,0:10:23.97:0,24,464	./.	./.	1/1:15,0:14:2.94:18,3,0	1/1:18,0:16:6.39:42,6,0	1/1:19,0:19:2.92:17,3,0	1/1:14,0:12:3.57:27,4,0	1/1:13,0:11:6.02:126,6,0	1/1:2,19:21:44.60:419,45,0	./.	1/1:10,0:9:5.93:58,6,0	1/1:10,0:9:5.95:59,6,0	1/1:18,0:18:15.49:141,15,0	0/0:4,0:4:9.49:0,9,184	1/1:3,2:4:6.01:74,6,0	0/0:33,0:29:71.18:0,71,899	0/0:40,0:38:66.40:0,66,852	1/1:3,15:16:25.08:301,25,0	./.	0/1:38,0:31:40.40:161,0,40	1/1:6,0:6:0.47:1,0,0	1/1:15,0:14:1.36:3,1,0	0/1:14,0:14:0.10:0,0,0	1/1:9,0:8:3:28,3,0	1/1:18,0:17:34.83:334,35,0	1/1:9,0:8:4.39:30,4,0	1/1:10,0:6:14.62:106,15,0
chr10	93050907	.	TGCGCGCGCGC	T	1749.26	PASS	AC=20;AF=0.400;AN=50;BaseQRankSum=5.842;DP=416;FS=1.680;HRun=0;HaplotypeScore=149.6711;InbreedingCoeff=0.6972;MQ=44.20;MQ0=28;MQRankSum=-7.328;QD=13.25;ReadPosRankSum=0.072;VQSLOD=2.4775;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:44.63:0,45,882	0/0:13,0:10:24.08:0,24,1017	./.	./.	0/0:15,0:14:2.12:0,2,32	1/1:4,14:16:9.03:239,9,0	1/1:4,16:20:2.76:87,3,0	1/1:12,2:12:14.87:245,15,0	0/0:4,0:12:5.97:0,6,90	0/0:20,0:20:48.29:0,48,746	./.	1/1:3,7:9:6.02:176,6,0	1/1:2,10:11:11.95:212,12,0	1/1:7,11:18:19.78:417,20,0	0/0:4,0:4:6.49:0,6,217	0/0:5,0:4:5.89:0,6,37	0/0:30,0:26:48.16:0,48,1723	0/0:40,0:38:66.23:0,66,2366	0/0:18,0:16:27.27:0,27,337	0/0:5,0:5:3.01:0,3,75	0/0:34,0:27:34.28:0,34,722	1/1:1,5:6:0.89:2,1,0	1/1:4,11:14:2.24:4,2,0	0/0:3,13:16:0.32:0,0,1	1/1:2,7:8:3.01:78,3,0	0/0:18,0:17:31.76:0,32,562	0/0:9,0:8:6.02:0,6,95	1/1:6,4:6:15.05:458,15,0
chr10	93051847	.	TA	T	5591.48	PASS	AB=0.857;AC=23;AF=0.411;AN=56;BaseQRankSum=17.996;DP=668;FS=6.553;HRun=10;HaplotypeScore=95.6776;InbreedingCoeff=0.9066;MQ=68.89;MQ0=0;MQRankSum=0.742;QD=20.56;ReadPosRankSum=0.684;VQSLOD=5.2550;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:93.18:0,93,989	0/0:10,0:10:6.86:0,7,245	0/1:5,1:6:14.03:14,0,87	0/0:12,0:12:17.24:0,17,162	0/0:41,0:41:90.15:0,90,954	1/1:0,18:18:50.99:443,51,0	1/1:4,8:12:24.41:202,24,0	1/1:7,26:33:74.82:636,75,0	0/0:23,0:23:63.17:0,63,697	0/0:26,0:26:67.26:0,67,714	0/0:19,0:19:45.12:0,45,498	1/1:2,16:18:44.99:391,45,0	1/1:3,24:27:68.98:599,69,0	1/1:2,28:30:80.98:703,81,0	0/0:23,0:25:52.97:0,53,606	0/0:32,0:32:90.06:0,90,969	0/0:29,0:29:75.19:0,75,821	0/0:12,0:12:30.08:0,30,332	0/0:14,0:14:8.89:0,9,301	0/0:34,0:34:84.23:0,84,928	0/0:25,1:26:46.08:0,46,703	1/1:6,23:29:65.96:573,66,0	1/1:4,18:22:50.98:443,51,0	1/1:1,23:24:53.99:469,54,0	1/1:4,23:27:65.97:573,66,0	0/0:28,1:29:46.13:0,46,729	0/0:29,0:29:75.19:0,75,821	1/1:5,21:26:62.93:547,63,0
chr10	93053037	.	G	GGCGA	8860.54	PASS	AB=0.500;AC=21;AF=0.389;AN=54;BaseQRankSum=3.238;DP=349;FS=0.434;HRun=0;HaplotypeScore=147.1826;InbreedingCoeff=0.8948;MQ=65.79;MQ0=0;MQRankSum=-9.604;QD=72.63;ReadPosRankSum=0.606;VQSLOD=6.0600;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:42.14:1134,42,0	0/0:9,0:9:24.08:0,24,478	0/0:10,0:10:18.10:0,18,488	0/0:11,0:11:30.10:0,30,576	0/0:11,0:10:30.10:0,30,598	1/1:0,14:14:42.14:1168,42,0	1/1:1,6:7:21.07:556,21,0	1/1:4,14:18:47.53:1200,48,0	0/0:13,0:13:39.09:0,39,738	0/0:11,0:11:19.37:0,19,585	0/0:7,0:6:18.06:0,18,356	1/1:1,15:16:45.15:1244,45,0	1/1:0,14:14:42.14:1167,42,0	1/1:1,13:14:42.14:1159,42,0	0/0:11,0:10:33.11:0,33,640	0/0:16,0:16:48.16:0,48,953	0/0:37,0:37:94.49:0,94,2002	0/0:30,0:30:84.25:0,84,1626	0/0:12,0:12:30.03:0,30,557	0/0:5,0:5:15.05:0,15,294	0/0:9,0:9:14.55:0,15,245	1/1:1,5:6:12.04:334,12,0	1/1:0,4:4:9.03:250,9,0	0/1:0,9:9:24.23:314,0,24	1/1:0,4:4:12.04:334,12,0	0/0:16,0:15:42.14:0,42,806	0/0:19,0:19:54.19:0,54,1068	./.
chr10	93053054	.	C	CCTGCTCTATGACTGGACTGCAAATGGA	81568.07	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=3.310;DP=527;FS=14.815;HRun=0;HaplotypeScore=401.3375;InbreedingCoeff=0.9960;MQ=65.50;MQ0=0;MQRankSum=-14.921;QD=203.92;ReadPosRankSum=0.930;VQSLOD=3.6836;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:29:72.25:6487,72,0	0/0:10,0:10:30.10:0,30,1843	0/0:13,0:13:39.11:0,39,1847	0/0:19,0:20:54.15:0,54,2219	1/1:16,0:18:45.15:3361,45,0	1/1:25,0:25:59.15:5363,59,0	1/1:16,0:16:39.13:3502,39,0	1/1:23,0:23:54.15:3291,54,0	1/1:13,0:15:45.10:3524,45,0	1/1:16,0:16:45.11:3663,45,0	1/1:8,0:9:27.09:1453,27,0	1/1:22,0:22:57.20:6243,57,0	1/1:24,1:25:72.23:5996,72,0	1/1:21,2:23:60.21:5418,60,0	0/0:12,0:11:36.12:0,36,2470	1/1:24,0:27:75.26:6415,75,0	0/0:42,0:41:99:0,107,6764	0/0:30,0:30:81.23:0,81,5680	1/1:10,0:12:21.03:1767,21,0	1/1:9,0:10:24.08:1917,24,0	1/1:7,0:23:18.06:1520,18,0	1/1:11,0:10:24.07:1456,24,0	1/1:12,0:12:36.12:2661,36,0	1/1:13,2:15:30.10:2504,30,0	1/1:15,0:15:36.12:3064,36,0	1/1:18,0:18:51.16:4022,51,0	1/1:19,0:24:69.24:6221,69,0	1/1:9,0:9:27:1718,27,0
chr10	93053526	.	A	AC	2266.37	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=7.378;DP=538;FS=2.160;HRun=6;HaplotypeScore=124.0660;InbreedingCoeff=0.4759;MQ=72.40;MQ0=0;MQRankSum=-1.945;QD=8.58;ReadPosRankSum=-1.978;VQSLOD=0.5260;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:99:0,105,1342	0/0:7,0:7:17.79:0,18,207	0/0:25,0:24:65.91:0,66,773	0/0:22,0:21:54.09:0,54,655	1/1:11,1:12:12.35:66,12,0	0/1:9,0:9:14.19:14,0,16	0/0:22,0:22:43.23:0,43,202	0/1:11,0:11:18.21:35,0,18	1/1:16,0:16:1.08:147,1,0	1/1:13,1:14:33.62:241,34,0	1/1:14,0:14:2.89:87,3,0	0/0:18,0:18:16.26:0,16,158	0/1:16,0:15:34.93:35,0,83	0/1:22,0:22:26.54:27,0,142	0/0:22,0:22:57.18:0,57,734	1/1:17,0:17:41.10:275,41,0	0/0:45,0:45:99:0,120,1553	0/0:29,0:29:87.28:0,87,1123	1/1:7,3:10:27.76:228,28,0	1/1:12,0:12:24.47:128,24,0	1/1:34,1:35:86.54:624,87,0	0/0:11,0:11:0.86:0,1,80	0/1:15,0:15:23.81:24,0,68	0/1:18,0:18:4.64:5,0,114	0/0:8,0:8:20.22:0,20,103	1/1:19,0:19:45.77:320,46,0	1/1:24,0:24:4.56:209,5,0	0/0:25,0:25:63.20:0,63,813
chr10	93055156	.	A	AC	9235.60	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-17.137;DP=742;FS=0.962;HRun=5;HaplotypeScore=77.3894;InbreedingCoeff=0.9997;MQ=71.91;MQ0=5;MQRankSum=-1.540;QD=32.29;ReadPosRankSum=3.109;VQSLOD=5.4305;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.09:0,87,898	0/0:10,0:10:24.06:0,24,258	0/0:55,0:38:70.99:0,71,800	0/0:56,0:33:50.81:0,51,620	0/0:20,0:20:51.12:0,51,542	1/1:3,25:28:66.21:868,66,0	1/1:4,22:26:51.17:665,51,0	1/1:6,28:34:78.23:996,78,0	0/0:18,0:18:54.14:0,54,580	0/0:26,0:26:69.13:0,69,725	0/0:19,0:19:54.10:0,54,560	1/1:1,31:32:81.09:1065,81,0	1/1:1,33:34:93.30:1222,93,0	1/1:1,18:19:48.16:632,48,0	0/0:25,0:25:75.17:0,75,791	0/0:24,0:24:57.14:0,57,607	0/0:20,0:20:57.14:0,57,612	0/0:17,0:17:42.10:0,42,451	0/0:21,0:21:47.99:0,48,498	0/0:27,0:27:72.16:0,72,762	0/0:17,0:17:42.10:0,42,451	1/1:1,17:18:48.16:631,48,0	1/1:2,22:25:57.19:750,57,0	1/1:0,31:31:84.27:1105,84,0	1/1:2,24:26:66.21:868,66,0	0/0:36,0:36:99:0,102,1075	0/0:32,0:31:96.19:0,96,996	1/1:1,12:13:33.11:434,33,0
chr10	93059130	.	GTCTCTCTCTCTC	G	4459.86	PASS	AB=0.736;AC=19;AF=0.365;AN=52;BaseQRankSum=9.343;DP=578;FS=5.536;HRun=0;HaplotypeScore=171.4511;InbreedingCoeff=0.0193;MQ=35.43;MQ0=72;MQRankSum=-4.087;QD=13.27;ReadPosRankSum=0.642;VQSLOD=3.2953;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,2:27:44.49:182,0,44	0/0:10,0:9:24.08:0,24,1015	./.	./.	1/1:7,4:17:3:67,3,0	0/1:7,12:18:0:0,0,0	0/1:11,13:21:3.08:3,0,88	0/1:38,0:26:16.85:515,0,17	1/1:10,2:22:15.86:169,16,0	0/1:18,5:22:99:951,0,572	0/0:10,1:10:2.84:0,3,14	0/0:6,12:16:3.01:0,3,85	1/1:3,13:16:10.21:194,10,0	0/1:13,11:22:0:0,0,0	0/0:24,0:21:44.90:0,45,2129	0/1:11,4:23:7.28:189,0,7	0/0:28,1:27:5.60:0,6,2329	0/0:21,0:18:51.17:0,51,2080	0/1:10,2:10:99:540,0,247	1/1:3,3:8:3.48:43,3,0	0/0:31,4:29:9.02:0,9,258	0/0:11,11:19:0.94:0,1,27	0/0:8,6:13:0.47:0,0,1	0/0:8,22:26:3.01:0,3,99	0/0:1,12:15:2.74:0,3,12	0/1:11,5:25:99:1208,0,105	0/1:12,4:17:13.70:347,0,14	0/1:6,0:4:53.22:53,0,100
chr10	93059134	.	CTCTCTCTCTGTGTGTGTGTG	C	5689.85	PASS	AB=1.000;AC=20;AF=0.400;AN=50;BaseQRankSum=7.859;DP=536;FS=4.568;HRun=0;HaplotypeScore=191.4979;InbreedingCoeff=0.2113;MQ=35.73;MQ0=71;MQRankSum=-4.788;QD=18.59;ReadPosRankSum=-0.673;VQSLOD=3.0773;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:24:54.81:65,0,55	0/0:9,0:8:24.08:0,24,1431	./.	./.	1/1:18,0:17:3.01:82,3,0	./.	0/1:23,0:17:13.65:14,0,52	1/1:16,22:26:63.04:1168,63,0	1/1:24,0:20:15.37:262,15,0	0/1:30,0:21:99:1058,0,537	0/0:13,0:9:0.88:0,1,2	0/0:17,0:14:3.01:0,3,127	1/1:18,0:16:4.55:206,5,0	0/1:20,0:17:0:0,0,0	0/0:24,0:21:45.15:0,45,2505	0/1:24,0:22:1.64:254,0,2	0/0:26,0:24:32.74:0,33,2993	0/0:21,0:18:54.16:0,54,2232	0/1:13,0:8:99:681,0,155	1/1:8,0:7:3.01:48,3,0	0/0:35,0:24:6.02:0,6,265	0/1:19,0:15:4.53:5,0,33	0/0:13,0:11:0.89:0,1,2	0/0:32,0:26:3.01:0,3,67	0/0:15,0:15:1.54:0,2,4	0/1:27,0:24:99:1424,0,114	1/1:17,0:16:17.68:423,18,0	0/0:6,0:4:3.82:0,4,121
chr10	93059170	.	GTGTGTGTGTA	G	1505.72	PASS	AB=0.936;AC=17;AF=0.304;AN=56;BaseQRankSum=8.593;DP=551;FS=4.065;HRun=0;HaplotypeScore=173.0805;InbreedingCoeff=0.1648;MQ=40.92;MQ0=61;MQRankSum=-8.286;QD=6.41;ReadPosRankSum=-4.173;VQSLOD=1.4020;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,1:18:36.68:105,0,37	0/0:12,0:11:33.11:0,33,1368	0/0:22,0:6:8.16:0,8,106	0/0:27,0:9:19.87:0,20,175	1/1:16,0:12:15.42:79,15,0	0/0:24,0:22:24.70:0,25,261	0/0:22,0:18:23.53:0,24,243	0/0:31,0:29:51.65:0,52,623	0/1:13,2:13:40.26:84,0,40	0/1:19,3:18:97.86:353,0,98	1/1:6,2:7:5.96:43,6,0	0/0:19,0:17:4.61:0,5,96	0/1:23,0:22:5.28:5,0,262	0/0:18,0:17:15.86:0,16,146	0/0:24,0:23:44.68:0,45,1416	1/1:13,1:11:10.96:76,11,0	0/0:31,0:30:60.67:0,61,1991	0/0:15,0:14:39.07:0,39,1234	0/1:17,2:15:99:296,0,150	0/1:17,1:16:15.79:173,0,16	0/1:34,0:30:37.96:68,0,38	0/0:15,0:13:14.94:0,15,180	0/0:12,0:12:12.06:0,12,80	0/0:31,0:30:28.58:0,29,279	0/0:13,0:13:11.91:0,12,202	0/1:13,3:14:99:290,0,118	0/1:19,0:14:73.47:73,0,84	1/1:4,0:3:5.75:32,6,0
chr10	93059178	.	GTA	G	662.94	PASS	AB=0.969;AC=16;AF=0.286;AN=56;BaseQRankSum=8.688;DP=525;FS=0.538;HRun=0;HaplotypeScore=136.1010;InbreedingCoeff=0.4412;MQ=43.21;MQ0=43;MQRankSum=-7.050;QD=3.28;ReadPosRankSum=-6.998;VQSLOD=-0.0561;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,4:18:4.06:109,0,4	0/0:10,0:10:21.02:0,21,313	0/0:26,0:8:14.14:0,14,152	0/0:35,0:16:40.78:0,41,367	1/1:17,0:14:15.54:80,16,0	0/0:22,0:22:36.64:0,37,287	0/0:17,0:14:26.47:0,26,194	0/0:31,0:29:68.78:0,69,622	0/1:15,0:13:8.27:84,0,8	0/1:18,0:16:42.57:43,0,67	1/1:7,0:7:5.96:43,6,0	0/0:17,0:16:13.76:0,14,106	0/0:22,0:22:41.65:0,42,315	0/0:17,0:16:12.85:0,13,97	0/0:19,0:18:41.54:0,42,407	1/1:14,0:12:8.63:64,9,0	0/0:29,0:29:60.58:0,61,705	0/0:14,0:14:36.03:0,36,462	0/1:19,1:17:91.90:92,0,95	1/1:19,0:17:9.97:202,10,0	1/1:32,0:28:14.22:86,14,0	0/0:11,0:11:17.92:0,18,146	0/0:11,0:11:12.05:0,12,79	0/0:28,0:28:11.05:0,11,252	0/0:10,0:10:11.70:0,12,88	0/1:17,0:15:9.35:9,0,102	0/1:18,0:14:25.70:29,0,26	0/0:4,0:4:7.25:0,7,58
chr10	93059180	.	A	ATTG	3714.73	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=9.061;DP=502;FS=3.635;HRun=0;HaplotypeScore=141.1444;InbreedingCoeff=0.9388;MQ=46.01;MQ0=39;MQRankSum=-7.990;QD=18.57;ReadPosRankSum=-5.552;VQSLOD=2.5306;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:21,4:19:28.30:529,28,0	0/0:9,0:9:21:0,21,273	0/0:26,0:8:21.07:0,21,295	0/0:37,0:18:44.58:0,45,614	1/1:6,10:14:15.34:139,15,0	0/0:21,0:21:40.86:0,41,576	0/0:19,0:16:15.56:0,16,376	0/0:31,0:29:62.86:0,63,722	1/1:12,5:17:25.50:277,26,0	1/1:10,6:14:21.07:398,21,0	1/1:5,3:8:9.26:53,9,0	0/0:15,0:14:12.94:0,13,210	0/0:19,0:19:39.13:0,39,555	0/0:15,0:14:17.78:0,18,254	0/0:16,0:16:33.11:0,33,469	1/1:6,7:12:23.86:291,24,0	0/0:25,0:25:50.98:0,51,705	0/0:13,0:13:24.08:0,24,342	1/1:17,3:18:41.90:623,42,0	1/1:8,13:19:39.16:372,39,0	1/1:12,13:24:14.27:133,14,0	0/0:10,0:10:16.40:0,16,253	0/0:10,0:10:10.81:0,11,169	0/0:23,0:23:11.19:0,11,444	0/0:10,0:10:5.53:0,6,85	1/1:8,8:15:33.58:620,34,0	1/1:9,10:16:16.21:282,16,0	0/0:3,0:3:9.03:0,9,126
chr10	93059654	.	A	ACGGG	8214.63	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=9.284;DP=370;FS=30.021;HRun=0;HaplotypeScore=108.7868;InbreedingCoeff=0.8342;MQ=73.90;MQ0=0;MQRankSum=-11.518;QD=31.00;ReadPosRankSum=1.684;VQSLOD=2.7445;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,1:13:33.03:483,33,0	0/0:12,0:12:33.11:0,33,680	0/0:21,0:21:37.70:0,38,610	0/0:13,0:11:26.86:0,27,325	1/1:11,2:13:20.43:405,20,0	1/1:13,0:13:15.02:221,15,0	1/1:8,0:8:12.04:161,12,0	0/1:12,0:12:9.07:112,0,9	1/1:10,0:10:24.07:416,24,0	1/1:13,1:15:27.32:584,27,0	1/1:21,0:21:43.30:783,43,0	1/1:16,0:16:34.97:437,35,0	1/1:15,0:15:39.03:457,39,0	1/1:13,0:13:27.63:385,28,0	0/0:18,0:18:48.15:0,48,925	1/1:9,0:9:9.53:259,10,0	0/0:20,0:19:54.18:0,54,1069	0/0:21,0:21:63.20:0,63,1261	1/1:6,0:6:18.06:291,18,0	1/1:9,0:9:26.96:353,27,0	1/1:6,0:6:15.01:200,15,0	1/1:9,0:9:11.98:205,12,0	1/1:20,0:21:41.05:556,41,0	1/1:5,0:5:1.36:41,1,0	1/1:10,0:10:15.48:258,15,0	1/1:17,0:17:40.98:575,41,0	1/1:19,1:20:47.19:854,47,0	1/1:4,0:4:12.04:179,12,0
chr10	93059656	.	G	GGGGGGT	9219.99	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=9.741;DP=374;FS=15.611;HRun=0;HaplotypeScore=127.9031;InbreedingCoeff=0.9153;MQ=70.38;MQ0=0;MQRankSum=-12.513;QD=33.65;ReadPosRankSum=1.175;VQSLOD=3.6578;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:24.08:339,24,0	0/0:12,0:12:36.11:0,36,748	0/0:21,0:21:38.56:0,39,561	0/0:11,0:9:14.51:0,15,172	1/1:15,0:15:20.83:268,21,0	1/1:14,0:14:18.06:355,18,0	1/1:10,0:10:18.06:347,18,0	1/1:17,0:17:22.50:413,23,0	1/1:10,0:10:21.07:276,21,0	1/1:15,0:15:30.04:366,30,0	1/1:17,0:17:36.20:517,36,0	1/1:15,0:15:33.11:701,33,0	1/1:16,0:16:30.10:597,30,0	1/1:14,0:14:35.15:630,35,0	0/0:16,0:16:45.14:0,45,951	1/1:12,0:12:27.09:453,27,0	0/0:19,0:18:57.15:0,57,1133	0/0:21,0:21:57.18:0,57,1217	1/1:6,0:6:18.06:238,18,0	1/1:7,0:7:15.04:201,15,0	1/1:5,0:5:12.04:164,12,0	1/1:8,0:8:15.04:292,15,0	1/1:20,0:20:39.13:762,39,0	0/1:8,0:8:1.62:184,0,2	1/1:10,0:10:21.02:374,21,0	1/1:15,0:15:36.04:441,36,0	1/1:20,0:20:48.15:641,48,0	1/1:4,4:9:24.08:661,24,0
chr10	93059657	.	G	GGGGGT	13348.63	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=9.436;DP=421;FS=17.716;HRun=0;HaplotypeScore=129.4966;InbreedingCoeff=0.9785;MQ=66.81;MQ0=0;MQRankSum=-12.544;QD=41.58;ReadPosRankSum=-0.066;VQSLOD=3.8092;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:24.08:383,24,0	0/0:13,0:13:36.11:0,36,687	0/0:20,0:20:37.39:0,37,518	0/0:11,0:9:15.01:0,15,195	1/1:15,0:15:21.06:312,21,0	1/1:9,9:20:27.08:688,27,0	1/1:6,8:14:21.05:560,21,0	1/1:18,7:27:25.04:939,25,0	1/1:10,0:10:21.07:317,21,0	1/1:15,0:15:30.07:437,30,0	1/1:16,0:16:36.20:589,36,0	1/1:7,12:19:42.10:1037,42,0	1/1:8,12:20:48.16:1320,48,0	1/1:2,12:14:35.15:909,35,0	0/0:16,0:16:45.15:0,45,874	1/1:13,0:13:27.09:485,27,0	0/0:19,0:18:57.16:0,57,1044	0/0:21,0:21:60.18:0,60,1140	1/1:7,0:7:21.04:296,21,0	1/1:7,0:7:15.05:242,15,0	1/1:5,0:5:12.04:182,12,0	1/1:5,6:12:24.07:641,24,0	1/1:8,14:23:45.14:1235,45,0	1/1:5,3:9:14.81:330,15,0	1/1:12,6:20:33.03:778,33,0	1/1:15,0:15:36.10:513,36,0	1/1:20,0:20:48.16:714,48,0	1/1:9,0:9:24.08:440,24,0
chr10	93059658	.	G	GGGGT	12553.01	PASS	AB=0.988;AC=40;AF=0.714;AN=56;BaseQRankSum=9.475;DP=461;FS=19.873;HRun=0;HaplotypeScore=131.1319;InbreedingCoeff=0.6825;MQ=62.30;MQ0=0;MQRankSum=-12.680;QD=34.58;ReadPosRankSum=1.903;VQSLOD=3.5633;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,8:12:24.08:585,24,0	0/0:13,0:13:39.11:0,39,653	0/0:18,0:18:38.58:0,39,502	0/0:11,0:9:15.02:0,15,182	1/1:3,12:18:20.86:510,21,0	1/1:20,0:20:25.62:388,26,0	0/1:14,0:14:0.51:317,0,1	0/1:28,0:28:34.38:510,0,34	1/1:0,9:13:21.07:520,21,0	1/1:4,8:17:36.06:787,36,0	1/1:3,14:17:36.19:954,36,0	0/1:18,1:19:7.80:624,0,8	1/1:18,0:18:48.15:754,48,0	1/1:14,0:14:35.15:541,35,0	0/0:16,0:16:45.15:0,45,796	1/1:5,8:21:27.09:622,27,0	0/0:19,0:18:57.16:0,57,955	0/0:21,0:21:60.18:0,60,1037	1/1:0,7:13:33.09:737,33,0	1/1:1,6:12:15.04:372,15,0	1/1:1,3:6:12.04:288,12,0	1/1:13,0:13:24.06:374,24,0	1/1:22,0:22:42.61:697,43,0	0/1:9,0:9:16.25:169,0,16	1/1:20,0:20:13.60:412,14,0	1/1:3,14:19:39.11:930,39,0	1/1:7,15:29:47.83:1136,48,0	1/1:9,0:9:24.07:325,24,0
chr10	93059981	.	T	TG	26750.67	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-14.219;DP=766;FS=5.668;HRun=1;HaplotypeScore=67.4324;InbreedingCoeff=0.9999;MQ=88.65;MQ0=0;MQRankSum=-8.759;QD=43.93;ReadPosRankSum=3.168;VQSLOD=4.7891;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,47:50:99:2014,126,0	0/0:10,0:10:30.10:0,30,420	0/0:28,0:28:54.24:0,54,1030	0/0:27,0:27:75.18:0,75,966	1/1:0,25:25:75.26:1198,75,0	1/1:1,20:21:60.20:959,60,0	1/1:0,32:32:90.31:1439,90,0	1/1:0,35:35:99:1653,105,0	1/1:0,30:30:90.31:1438,90,0	1/1:0,23:23:66.23:1053,66,0	1/1:1,20:21:45.15:718,45,0	1/1:1,24:25:66.22:1053,66,0	1/1:1,28:29:84.29:1343,84,0	1/1:0,29:29:71.93:1151,72,0	0/0:38,0:38:99:0,111,1548	1/1:0,17:17:42.14:671,42,0	0/0:26,0:26:75.24:0,75,1032	0/0:28,0:28:84.22:0,84,1123	1/1:2,15:17:48.11:708,48,0	1/1:1,24:25:69.24:1103,69,0	1/1:0,48:48:99:2062,129,0	1/1:0,17:17:51.17:814,51,0	1/1:1,19:20:54.18:862,54,0	1/1:0,26:26:69.24:1103,69,0	1/1:0,34:34:90.31:1438,90,0	1/1:1,29:30:90.31:1430,90,0	1/1:1,38:39:99:1822,114,0	1/1:1,15:16:45.15:719,45,0
chr10	93061858	.	GT	G	1954.94	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=5.069;DP=492;FS=0.958;HRun=8;HaplotypeScore=63.6847;InbreedingCoeff=0.9006;MQ=79.43;MQ0=3;MQRankSum=0.557;QD=11.64;ReadPosRankSum=0.776;VQSLOD=2.6177;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:41.83:0,42,565	0/1:5,0:5:4.34:4,0,130	0/0:36,0:23:29.32:0,29,232	0/0:22,1:19:3.28:0,3,48	0/0:24,0:25:53.69:0,54,684	1/1:1,19:20:33.05:318,33,0	1/1:2,8:10:15.02:145,15,0	1/1:6,17:23:41.74:357,42,0	0/0:12,0:12:27.92:0,28,291	0/0:11,0:11:19.06:0,19,267	0/0:16,0:16:35.57:0,36,416	1/1:2,13:15:24.04:231,24,0	1/1:4,13:17:15:139,15,0	1/1:0,10:10:12.02:116,12,0	0/0:22,0:22:62.87:0,63,675	0/0:23,0:23:53.89:0,54,614	0/0:23,0:23:41.95:0,42,363	0/0:15,0:15:36.09:0,36,411	0/0:15,0:15:18.35:0,18,318	0/0:17,0:17:48.05:0,48,482	0/0:13,0:13:29.99:0,30,282	1/1:2,17:19:24.09:329,24,0	1/1:7,13:20:20.12:174,20,0	1/1:2,10:12:15.43:135,15,0	1/1:5,12:17:12.98:222,13,0	0/0:16,0:16:29.13:0,29,397	0/0:24,0:23:47.82:0,48,567	0/0:8,0:8:23.95:0,24,215
chr10	93061866	.	T	TG	226.42	PASS	AB=0.745;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.458;DP=506;FS=3.134;HRun=10;HaplotypeScore=82.6031;InbreedingCoeff=-0.0300;MQ=76.98;MQ0=3;MQRankSum=0.187;QD=3.84;ReadPosRankSum=-1.012;VQSLOD=0.4916;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:33.50:0,33,249	0/0:5,0:5:14.95:0,15,118	0/0:35,0:22:15.75:0,16,119	0/1:22,0:19:10.84:11,0,30	0/0:28,0:28:62.33:0,62,514	0/0:25,0:25:43.49:0,43,252	0/0:8,0:8:14.38:0,14,76	0/0:22,0:23:34.13:0,34,187	0/0:13,0:13:26.59:0,27,199	0/0:10,0:10:20.94:0,21,169	0/0:13,0:14:31.97:0,32,248	0/0:17,0:17:31.88:0,32,183	0/0:19,0:19:23.38:0,23,144	0/0:13,0:13:16.88:0,17,85	0/0:21,0:21:53.86:0,54,430	0/0:21,0:23:43.92:0,44,341	0/1:8,18:26:13.21:221,0,13	0/0:16,0:16:38.56:0,39,298	0/0:14,0:14:26.83:0,27,209	0/0:17,0:17:20.91:0,21,166	0/0:11,0:11:14.96:0,15,121	0/0:24,0:24:50.41:0,50,298	0/0:19,0:19:11.08:0,11,139	0/0:14,0:14:19.15:0,19,103	0/0:16,0:16:27.39:0,27,140	0/0:15,0:17:37.37:0,37,272	0/0:19,0:20:45.99:0,46,350	0/1:4,5:9:30.93:92,0,31
chr10	93062612	.	T	TAA	658.42	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.205;DP=640;FS=0.000;HRun=11;HaplotypeScore=81.6770;InbreedingCoeff=0.8626;MQ=68.14;MQ0=3;MQRankSum=-0.560;QD=20.58;ReadPosRankSum=-1.055;VQSLOD=2.8252;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:23:51.17:739,51,0	0/0:13,0:13:36.04:0,36,343	0/0:25,0:22:32.89:0,33,337	0/0:11,0:10:0.76:0,1,80	0/0:28,0:28:62.99:0,63,609	0/0:22,0:21:54.01:0,54,515	0/0:16,0:17:47.78:0,48,436	0/0:27,0:27:47.95:0,48,461	0/0:20,0:20:41.87:0,42,376	0/0:32,0:32:78.05:0,78,750	0/0:16,0:17:29.94:0,30,336	0/0:22,0:24:62.54:0,63,564	0/0:21,0:24:62.56:0,63,573	0/0:17,0:18:32.88:0,33,356	0/0:19,0:19:57.09:0,57,553	0/0:22,0:24:53.49:0,53,486	0/0:31,0:31:80.79:0,81,748	0/0:23,0:23:47.86:0,48,439	0/0:23,0:23:41.92:0,42,448	0/0:40,0:40:55.52:0,56,725	0/0:20,0:20:45.01:0,45,429	0/0:18,0:18:38.38:0,38,351	0/0:19,0:19:42:0,42,402	0/0:19,0:21:44.65:0,45,469	0/0:19,0:19:41.87:0,42,457	0/0:29,0:30:68.98:0,69,664	0/0:40,0:40:99:0,99,955	1/1:3,0:9:9.86:34,10,0
chr10	93062847	.	T	TAA	1917.31	PASS	AB=0.687;AC=20;AF=0.357;AN=56;BaseQRankSum=-1.696;DP=494;FS=1.583;HRun=15;HaplotypeScore=70.8174;InbreedingCoeff=0.6316;MQ=67.78;MQ0=1;MQRankSum=2.302;QD=10.65;ReadPosRankSum=-2.220;VQSLOD=1.9241;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:3,4:17:26.50:135,0,27	0/0:8,0:10:20.37:0,20,142	0/0:25,0:13:12.57:0,13,76	0/1:16,0:13:7.27:7,0,38	0/0:28,1:32:12.90:0,13,341	1/1:9,13:27:27.76:327,28,0	1/1:5,5:10:3.01:38,3,0	0/1:4,10:17:1.62:310,0,2	0/0:12,0:13:20.33:0,20,154	0/0:24,0:26:25.94:0,26,238	0/0:25,0:27:53.17:0,53,410	1/1:1,7:11:16.14:140,16,0	1/1:10,5:15:12.04:152,12,0	1/1:5,1:15:17.64:119,18,0	0/0:8,0:9:17.48:0,17,130	0/0:6,0:9:17.33:0,17,157	0/0:8,0:10:11.70:0,12,134	0/0:20,0:21:0.71:0,1,241	0/0:21,0:25:10.56:0,11,109	0/0:17,0:22:13.39:0,13,198	0/0:8,0:11:23.36:0,23,162	1/1:5,8:13:20.96:228,21,0	1/1:4,9:15:30.41:324,30,0	1/1:3,2:6:9.02:104,9,0	0/1:6,8:16:20.46:229,0,20	0/0:19,0:20:38.37:0,38,296	0/0:25,0:31:37.27:0,37,349	0/0:21,0:23:29.02:0,29,331
chr10	93063821	.	AC	A	785.88	PASS	AB=0.922;AC=19;AF=0.339;AN=56;BaseQRankSum=0.134;DP=440;FS=21.501;HRun=12;HaplotypeScore=73.0604;InbreedingCoeff=0.2788;MQ=80.18;MQ0=3;MQRankSum=2.289;QD=3.17;ReadPosRankSum=0.966;VQSLOD=-0.5484;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:5.96:0,6,39	0/0:9,0:9:22.28:0,22,174	0/0:45,0:26:6.04:0,6,224	0/1:46,0:23:25.32:25,0,74	1/1:17,0:17:0.29:70,0,0	0/0:14,0:14:1.16:0,1,107	0/1:19,0:19:0.01:0,0,128	0/1:24,0:24:19.09:19,0,70	1/1:15,0:15:19.96:135,20,0	1/1:12,0:12:8.07:66,8,0	1/1:10,3:14:22.35:153,22,0	0/0:11,0:12:11.72:0,12,83	0/0:9,0:9:16.18:0,16,123	0/0:7,0:7:14.69:0,15,109	0/0:12,0:12:17.82:0,18,150	0/0:6,0:6:10.25:0,10,87	0/0:20,1:21:0.46:0,0,311	0/1:24,0:24:54.32:54,0,233	1/1:11,0:11:7.03:34,7,0	0/1:9,7:17:48.82:114,0,49	1/1:13,0:13:11.38:64,11,0	0/0:8,0:8:5.80:0,6,52	0/0:10,0:10:10.33:0,10,66	0/0:7,0:7:4.94:0,5,44	0/0:7,0:8:5.49:0,5,22	0/1:18,1:19:25.47:89,0,25	0/1:13,2:16:1.41:131,0,1	0/0:6,0:7:7.54:0,8,73
chr10	93065148	.	C	CT	905.57	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-6.806;DP=707;FS=2.760;HRun=10;HaplotypeScore=75.4257;InbreedingCoeff=0.6424;MQ=76.68;MQ0=0;MQRankSum=-0.642;QD=13.12;ReadPosRankSum=-0.454;VQSLOD=3.6569;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,43:57:52.12:999,52,0	0/0:12,0:12:26.63:0,27,221	0/1:12,0:12:8.03:8,0,84	0/0:22,0:23:16.76:0,17,210	0/0:27,2:31:11.72:0,12,483	0/0:16,1:18:17.98:0,18,341	0/0:21,0:23:46.93:0,47,372	0/0:26,0:26:59.89:0,60,493	0/0:32,0:32:68.84:0,69,561	0/0:33,0:33:74.87:0,75,614	0/0:18,0:19:43.39:0,43,367	0/0:25,0:25:59.88:0,60,491	0/0:28,0:28:68.87:0,69,564	0/0:21,0:22:61.95:0,62,498	0/0:35,0:35:95.85:0,96,786	0/0:28,0:28:41.72:0,42,489	0/0:30,0:32:84.94:0,85,672	0/0:14,0:14:38.95:0,39,320	0/0:19,1:20:12.92:0,13,309	0/0:19,0:19:44.92:0,45,369	0/0:35,1:38:64.93:0,65,715	0/0:26,1:28:44.46:0,44,549	0/0:21,0:22:55.87:0,56,439	0/0:29,0:31:81.91:0,82,646	0/0:18,1:20:43.01:0,43,341	0/0:27,0:27:68.90:0,69,566	0/0:24,0:23:53.88:0,54,443	0/0:7,0:7:20.98:0,21,172
chr10	93067446	.	G	GC	4534.23	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-9.633;DP=483;FS=1.244;HRun=8;HaplotypeScore=49.5096;InbreedingCoeff=0.9797;MQ=85.59;MQ0=0;MQRankSum=-1.656;QD=23.37;ReadPosRankSum=1.253;VQSLOD=5.3231;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:22:24.18:119,24,0	0/0:11,0:11:27:0,27,242	0/0:18,0:18:32.27:0,32,331	0/0:21,0:22:50.56:0,51,429	0/0:17,0:17:45.02:0,45,412	1/1:0,21:21:45.13:519,45,0	1/1:6,13:20:17.50:437,17,0	1/1:4,11:15:33.10:380,33,0	0/0:19,0:19:47.99:0,48,434	0/0:9,0:9:27.01:0,27,247	0/0:12,0:12:33.02:0,33,302	1/1:1,14:15:5.29:318,5,0	1/1:2,11:13:30.08:346,30,0	1/1:2,16:18:51.15:588,51,0	0/0:12,0:12:33.01:0,33,302	0/0:12,0:12:33.01:0,33,302	0/0:25,0:25:66.03:0,66,604	0/0:25,0:25:63.02:0,63,576	0/0:23,0:23:54.01:0,54,494	0/0:16,0:16:39.49:0,39,357	0/0:23,0:23:60.03:0,60,549	1/1:1,6:8:21.05:233,21,0	1/1:1,10:11:30.09:346,30,0	1/1:4,23:27:63.19:727,63,0	1/1:4,20:24:45.13:519,45,0	0/0:18,0:18:51.01:0,51,463	0/0:18,0:18:48.02:0,48,439	0/0:9,0:9:24.01:0,24,220
chr10	93067877	.	AC	A	10935.09	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=13.684;DP=641;FS=16.238;HRun=5;HaplotypeScore=69.7140;InbreedingCoeff=0.9995;MQ=71.25;MQ0=0;MQRankSum=-3.620;QD=30.46;ReadPosRankSum=2.832;VQSLOD=3.7350;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,46:48:99:1395,123,0	1/1:0,12:12:33.09:374,33,0	0/0:18,0:18:31.42:0,31,632	0/0:17,0:17:26.72:0,27,524	0/0:16,0:16:42.14:0,42,573	1/1:0,21:21:54.15:612,54,0	1/1:1,22:23:54.15:612,54,0	1/1:5,29:34:87.22:967,87,0	0/0:17,0:17:48.16:0,48,653	0/0:28,0:28:84.26:0,84,1116	0/0:17,0:17:51.17:0,51,694	1/1:2,23:25:72.21:816,72,0	1/1:0,18:18:51.15:578,51,0	1/1:1,18:19:51.15:579,51,0	1/1:1,13:14:39.11:442,39,0	0/0:24,0:24:69.22:0,69,928	1/1:0,30:30:84.24:952,84,0	1/1:1,18:19:54.15:613,54,0	0/0:21,0:21:57.18:0,57,764	0/0:32,0:32:87.28:0,87,1170	0/0:30,0:30:84.27:0,84,1133	1/1:2,16:18:48.11:544,48,0	1/1:1,25:26:66.15:748,66,0	1/1:0,19:19:54.15:613,54,0	1/1:0,24:24:72.21:817,72,0	0/0:36,0:36:99:0,108,1474	0/0:26,0:26:75.24:0,75,1007	1/1:0,9:9:24.07:272,24,0
chr10	93069212	.	C	CAGAG	3155.56	PASS	AB=0.894;AC=39;AF=0.813;AN=48;BaseQRankSum=1.274;DP=603;FS=0.000;HRun=0;HaplotypeScore=131.4450;InbreedingCoeff=0.0973;MQ=68.49;MQ0=11;MQRankSum=-0.722;QD=6.41;ReadPosRankSum=-1.458;VQSLOD=2.4906;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:30:431,30,0	./.	./.	./.	0/1:23,0:23:0:0,0,0	0/1:28,0:28:71:390,0,71	1/1:22,0:22:12.03:174,12,0	1/1:19,0:19:6.02:91,6,0	1/1:19,0:19:6.02:94,6,0	1/1:17,0:18:20.78:269,21,0	1/1:17,0:17:5.84:74,6,0	1/1:17,5:24:3.01:70,3,0	1/1:18,0:17:11.98:175,12,0	1/1:22,0:23:5.12:123,5,0	0/1:19,0:23:25.26:25,0,35	1/1:28,0:26:14.96:203,15,0	0/1:16,0:24:86.80:87,0,186	0/1:7,0:12:15.84:16,0,26	1/1:12,0:12:13.29:192,13,0	1/1:20,0:20:3.48:45,3,0	1/1:12,0:12:3.01:45,3,0	0/1:21,0:21:0:0,0,0	0/1:15,0:16:6.89:7,0,31	1/1:16,8:29:8.50:95,8,0	./.	1/1:22,0:22:27.08:448,27,0	1/1:31,0:30:15.04:230,15,0	0/0:3,0:5:9.02:0,9,91
chr10	93071389	.	GAGAGAGAGAGAGAT	G	8108.63	PASS	AB=0.812;AC=25;AF=0.463;AN=54;BaseQRankSum=1.750;DP=443;FS=29.935;HRun=0;HaplotypeScore=231.8325;InbreedingCoeff=0.0503;MQ=43.11;MQ0=3;MQRankSum=-4.192;QD=29.17;ReadPosRankSum=5.994;VQSLOD=2.4900;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:0:0,0,0	0/1:2,3:5:20.55:119,0,21	0/0:25,0:18:51.64:0,52,2520	0/0:23,0:20:60.20:0,60,3314	1/1:7,3:10:0.39:0,0,0	1/1:12,4:16:10.59:274,11,0	0/0:12,19:31:2.13:0,2,4	1/1:5,17:21:50.59:1447,51,0	0/1:16,4:20:41.57:528,0,42	0/1:7,1:8:18.89:518,0,19	0/0:7,3:10:2.36:0,2,8	0/1:14,3:17:1.26:334,0,1	0/1:9,3:13:20.88:277,0,21	1/1:11,7:17:15.04:544,15,0	0/1:9,10:19:36.67:338,0,37	0/1:14,3:17:21.29:263,0,21	0/1:12,2:14:7.74:487,0,8	1/1:10,2:12:26.29:756,26,0	0/1:8,1:7:6.94:238,0,7	0/1:9,7:16:0.89:1,0,16	./.	0/0:13,4:17:5.37:0,5,34	0/0:11,5:16:3.01:0,3,41	0/0:16,2:18:0.07:0,0,1	0/0:11,1:12:6.01:0,6,68	0/1:15,4:19:23.85:1235,0,24	1/1:6,5:11:18.04:630,18,0	0/1:2,1:3:0.16:119,0,0
chr10	93071391	.	GAGAGAGAGAGAT	G	7091.15	PASS	AB=0.933;AC=33;AF=0.611;AN=54;BaseQRankSum=3.547;DP=402;FS=24.526;HRun=0;HaplotypeScore=215.9781;InbreedingCoeff=0.1706;MQ=45.93;MQ0=3;MQRankSum=-4.631;QD=24.54;ReadPosRankSum=7.036;VQSLOD=1.9376;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,5:29:0:0,0,0	0/1:4,0:4:12.41:101,0,12	0/0:24,0:18:48.16:0,48,2135	0/0:24,0:21:63.14:0,63,2933	1/1:10,0:10:0.37:0,0,0	1/1:14,1:15:12.65:264,13,0	1/1:27,0:27:1.07:3,1,0	1/1:17,0:17:50.99:1237,51,0	0/1:17,1:18:39.86:444,0,40	0/1:7,0:7:7.66:414,0,8	1/1:10,0:10:0.87:2,1,0	0/1:14,2:16:16.95:301,0,17	0/1:12,1:13:49.95:225,0,50	1/1:17,1:17:15.04:513,15,0	0/1:17,2:19:18.42:266,0,18	1/1:15,1:16:5.49:295,5,0	1/1:10,0:10:9.53:423,10,0	1/1:9,1:10:26.83:665,27,0	1/1:6,0:4:11.58:237,12,0	0/1:14,1:15:3.33:3,0,7	./.	0/0:15,0:15:2.09:0,2,16	0/0:13,1:14:3.01:0,3,31	0/0:17,0:17:0.22:0,0,2	0/0:10,1:11:5.95:0,6,50	0/1:14,1:15:15.09:1082,0,15	1/1:10,1:11:15.05:513,15,0	1/1:3,0:3:1:101,1,0
chr10	93071393	.	GAGAGAGAGAT	G	6355.76	PASS	AB=0.929;AC=37;AF=0.712;AN=52;BaseQRankSum=3.897;DP=394;FS=23.507;HRun=0;HaplotypeScore=210.0994;InbreedingCoeff=0.2443;MQ=51.13;MQ0=2;MQRankSum=-3.863;QD=22.15;ReadPosRankSum=6.888;VQSLOD=1.9415;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/1:4,0:4:3.74:85,0,4	0/0:23,0:18:51.17:0,51,1782	0/0:24,0:22:66.18:0,66,2541	1/1:9,0:9:0.44:0,0,0	1/1:14,1:15:13.18:236,13,0	1/1:27,0:27:0.63:9,1,0	1/1:17,0:17:50.99:1057,51,0	0/1:16,1:17:20.76:387,0,21	0/1:6,2:8:4.42:416,0,4	1/1:10,0:10:2.78:12,3,0	0/1:15,1:16:0.80:265,0,1	0/1:12,1:13:31.95:188,0,32	1/1:15,3:17:15.04:443,15,0	0/1:18,1:19:1.55:197,0,2	1/1:14,2:16:13.90:305,14,0	1/1:10,0:10:17.73:434,18,0	1/1:9,0:9:27:563,27,0	1/1:4,1:4:11.96:230,12,0	1/1:14,0:14:0.30:12,0,0	./.	0/1:14,1:15:2.90:6,0,3	0/0:13,1:14:3:0,3,25	1/1:18,0:18:2.15:47,2,0	0/0:11,0:11:5.49:0,5,34	1/1:13,2:15:2.26:939,2,0	1/1:9,1:10:15.05:439,15,0	1/1:2,0:2:3.01:85,3,0
chr10	93071395	.	GAGAGAGAT	G	5657.16	PASS	AB=0.919;AC=41;AF=0.788;AN=52;BaseQRankSum=5.389;DP=396;FS=19.392;HRun=0;HaplotypeScore=207.7760;InbreedingCoeff=0.3033;MQ=55.55;MQ0=2;MQRankSum=-4.813;QD=19.37;ReadPosRankSum=5.249;VQSLOD=2.7566;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:4,0:4:2.92:72,3,0	0/0:22,0:17:38.77:0,39,1335	0/0:24,0:22:64.45:0,64,2032	1/1:9,1:10:3.43:24,3,0	1/1:15,0:15:13.54:210,14,0	1/1:27,0:27:1.79:20,2,0	1/1:17,0:17:50.99:881,51,0	0/1:17,0:17:19.11:353,0,19	1/1:8,0:8:3.51:336,4,0	1/1:10,0:10:2.98:22,3,0	1/1:17,0:17:11.96:248,12,0	0/1:11,2:13:28.73:160,0,29	1/1:18,0:17:15.04:371,15,0	1/1:19,0:19:13.08:169,13,0	1/1:17,0:17:7.25:314,7,0	1/1:11,0:11:25.28:406,25,0	1/1:9,0:9:26.98:494,27,0	1/1:5,0:4:12.02:203,12,0	1/1:14,0:14:4.24:28,4,0	./.	1/1:14,1:15:3.45:22,3,0	0/0:14,0:14:2.92:0,3,17	1/1:16,2:18:2.66:24,3,0	0/0:10,1:11:2.70:0,3,16	0/1:14,2:16:13.94:847,0,14	1/1:10,0:10:15.05:371,15,0	1/1:2,0:2:3.01:85,3,0
chr10	93071397	.	GAGAGAT	G	5368.36	PASS	AB=1.000;AC=45;AF=0.865;AN=52;BaseQRankSum=6.289;DP=412;FS=14.588;HRun=0;HaplotypeScore=209.3936;InbreedingCoeff=0.4553;MQ=56.75;MQ0=2;MQRankSum=-5.076;QD=16.99;ReadPosRankSum=3.493;VQSLOD=3.2613;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:4,0:4:5.51:62,6,0	0/0:21,0:16:38.77:0,39,1071	0/0:25,0:23:68.11:0,68,1563	1/1:10,1:11:6.42:48,6,0	1/1:14,1:15:10.27:161,10,0	1/1:25,1:26:2.31:28,2,0	1/1:17,0:17:50.99:695,51,0	1/1:14,3:17:0.65:304,1,0	1/1:12,0:12:30:413,30,0	1/1:8,0:8:3.01:32,3,0	1/1:13,3:16:11.83:195,12,0	0/1:13,0:13:5.06:120,0,5	1/1:19,0:18:18.04:310,18,0	1/1:20,0:20:22.43:191,22,0	1/1:15,3:18:26.80:408,27,0	1/1:11,1:12:29.72:418,30,0	1/1:8,1:9:27.03:461,27,0	1/1:5,0:4:12.04:179,12,0	1/1:15,1:16:11.54:93,12,0	./.	1/1:14,1:15:5.50:40,6,0	0/0:14,0:14:2.50:0,2,9	1/1:18,1:19:2.08:23,2,0	1/1:13,1:14:5.43:76,5,0	1/1:16,1:17:13.01:724,13,0	1/1:10,1:11:18.03:324,18,0	1/1:2,0:2:3.01:65,3,0
chr10	93071399	.	GAGAT	G	5510.40	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=7.033;DP=456;FS=12.055;HRun=0;HaplotypeScore=215.4944;InbreedingCoeff=0.5924;MQ=56.31;MQ0=2;MQRankSum=-6.127;QD=13.71;ReadPosRankSum=0.993;VQSLOD=3.5477;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,2:32:8.97:71,9,0	1/1:4,0:4:5.95:54,6,0	0/0:21,0:16:38.19:0,38,802	0/0:25,0:23:66.02:0,66,1172	1/1:11,1:12:5.85:48,6,0	1/1:12,5:17:12.50:174,12,0	1/1:23,3:26:2.08:55,2,0	1/1:17,0:17:50.98:552,51,0	1/1:15,4:19:27.02:353,27,0	1/1:12,1:13:38.90:405,39,0	1/1:6,4:10:5.99:84,6,0	1/1:12,3:15:11.95:159,12,0	1/1:13,3:16:18.24:179,18,0	1/1:21,0:20:18.04:227,18,0	1/1:18,3:21:23.56:224,24,0	1/1:17,6:23:33.02:415,33,0	1/1:10,4:14:29.21:362,29,0	1/1:11,2:13:35.92:459,36,0	1/1:4,2:5:15.01:215,15,0	1/1:18,3:21:17.91:194,18,0	./.	1/1:12,2:14:6.02:96,6,0	1/1:10,3:13:2.94:18,3,0	1/1:23,3:26:4.38:46,4,0	1/1:9,4:13:14.94:130,15,0	1/1:18,2:20:54.01:673,54,0	1/1:12,0:12:18.03:234,18,0	1/1:4,0:4:8.95:86,9,0
chr10	93071401	.	GAT	G	3749.72	PASS	AB=1.000;AC=47;AF=0.870;AN=54;BaseQRankSum=6.273;DP=453;FS=9.028;HRun=0;HaplotypeScore=205.2860;InbreedingCoeff=0.5292;MQ=60.39;MQ0=2;MQRankSum=-5.885;QD=9.76;ReadPosRankSum=1.944;VQSLOD=2.0460;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:8.97:71,9,0	1/1:3,1:4:5.97:65,6,0	0/0:23,0:18:41.23:0,41,614	0/0:26,0:24:67.75:0,68,835	1/1:11,0:11:5.59:48,6,0	1/1:16,0:16:11.99:103,12,0	1/1:26,0:26:2.43:19,2,0	1/1:17,0:17:50.67:386,51,0	1/1:19,0:19:11.04:178,11,0	1/1:15,1:16:44.83:388,45,0	1/1:10,0:10:5.95:48,6,0	1/1:14,0:14:11.98:105,12,0	1/1:15,0:15:0.53:78,1,0	1/1:18,2:19:17.92:151,18,0	1/1:18,3:21:23.69:219,24,0	1/1:23,0:23:31.14:242,31,0	1/1:14,0:14:25.74:212,26,0	1/1:12,1:13:35.82:318,36,0	1/1:8,0:7:20.90:165,21,0	1/1:20,0:20:15.76:121,16,0	./.	1/1:12,0:12:3.46:24,3,0	0/0:12,0:12:2.88:0,3,15	1/1:25,0:25:5.07:47,5,0	0/1:13,0:13:2.57:63,0,3	1/1:18,1:19:56.73:465,57,0	1/1:12,0:12:20.89:166,21,0	1/1:4,0:4:8.94:67,9,0
chr10	93071480	.	TAA	T	4361.88	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-11.877;DP=602;FS=0.850;HRun=3;HaplotypeScore=153.3561;InbreedingCoeff=0.9957;MQ=82.55;MQ0=0;MQRankSum=-1.690;QD=41.15;ReadPosRankSum=2.513;VQSLOD=4.2619;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:84.29:1285,84,0	1/1:0,5:5:15.05:230,15,0	0/0:19,0:19:43.82:0,44,959	0/0:22,1:23:26:0,26,1155	0/0:20,0:20:56.96:0,57,502	0/0:21,0:21:59.99:0,60,552	0/0:22,0:22:53.87:0,54,465	0/0:29,0:29:83.91:0,84,774	0/0:22,0:22:59.81:0,60,522	0/0:27,0:27:75.98:0,76,714	0/0:16,0:16:44.96:0,45,402	0/0:27,0:27:73.86:0,74,628	0/0:19,0:19:53.89:0,54,452	0/0:24,0:24:68.69:0,69,565	1/1:1,32:33:90.31:1378,90,0	0/0:25,0:25:71.86:0,72,625	1/1:0,17:17:45.15:689,45,0	1/1:0,17:17:51.17:780,51,0	0/0:22,0:22:62.96:0,63,572	0/0:26,0:26:77.85:0,78,664	0/0:14,0:14:35.74:0,36,269	0/0:13,0:13:35.96:0,36,312	0/0:11,0:11:26.91:0,27,234	0/0:15,0:15:38.71:0,39,298	0/0:18,0:18:54.03:0,54,499	0/0:31,0:31:89.97:0,90,825	0/0:29,0:29:83.79:0,84,738	0/0:23,0:23:68.96:0,69,607
chr10	93071483	.	AG	A	17492.51	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-11.208;DP=613;FS=7.014;HRun=1;HaplotypeScore=91.8264;InbreedingCoeff=0.9980;MQ=82.55;MQ0=0;MQRankSum=-2.192;QD=38.03;ReadPosRankSum=1.655;VQSLOD=5.1662;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:77.25:0,77,364	0/0:6,0:6:17.33:0,17,100	0/0:19,0:19:46.92:0,47,733	0/0:23,0:23:56.09:0,56,951	1/1:0,20:20:57.19:795,57,0	1/1:0,23:23:60.13:814,60,0	1/1:0,23:23:54.18:747,54,0	1/1:0,28:28:84.27:1156,84,0	1/1:0,20:20:54.14:732,54,0	1/1:1,25:26:78.18:1023,78,0	1/1:0,16:16:45.15:626,45,0	1/1:0,27:28:75.15:1001,75,0	1/1:0,19:19:54.11:722,54,0	1/1:0,24:24:69.23:961,69,0	0/0:33,0:33:86.69:0,87,448	1/1:0,26:26:72.17:980,72,0	0/0:20,0:20:45.48:0,45,217	0/0:17,0:17:38.87:0,39,226	1/1:0,23:23:66.18:860,66,0	1/1:0,25:25:75.25:1046,75,0	1/1:0,14:14:36.12:501,36,0	1/1:0,13:13:36.12:501,36,0	1/1:0,11:11:27.04:349,27,0	1/1:0,16:16:39.13:542,39,0	1/1:0,19:19:54.18:754,54,0	1/1:0,33:33:99:1291,99,0	1/1:0,30:30:84.28:1169,84,0	1/1:0,23:23:66.22:921,66,0
chr10	93074143	.	A	AC	2254.70	PASS	AB=0.995;AC=34;AF=0.607;AN=56;BaseQRankSum=-6.645;DP=459;FS=1.902;HRun=8;HaplotypeScore=88.9616;InbreedingCoeff=0.5411;MQ=58.26;MQ0=15;MQRankSum=3.588;QD=7.20;ReadPosRankSum=1.003;VQSLOD=1.1664;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:21:35.07:0,35,104	0/0:6,0:6:9:0,9,81	0/0:42,0:10:18.46:0,18,118	0/1:32,1:8:27.89:28,0,43	0/1:18,0:18:1.76:25,0,2	1/1:4,18:23:27.02:289,27,0	1/1:1,12:13:24.07:271,24,0	1/1:8,6:19:33.21:252,33,0	1/1:14,0:14:4.49:43,4,0	1/1:18,0:18:4.59:31,5,0	0/0:20,0:20:7.51:0,8,19	1/1:5,6:11:9.03:101,9,0	1/1:3,13:17:21.22:248,21,0	1/1:1,6:7:9.03:101,9,0	0/0:15,0:15:15.82:0,16,180	1/1:19,1:20:17.25:124,17,0	0/0:13,0:18:26.95:0,27,173	0/0:8,0:9:15.97:0,16,112	0/1:22,0:21:10.22:10,0,17	0/1:21,0:20:0.26:45,0,0	0/1:7,0:7:2.87:33,0,3	1/1:0,7:7:9.03:101,9,0	1/1:2,6:8:15.04:170,15,0	1/1:1,11:12:24.07:267,24,0	1/1:1,12:13:21.01:222,21,0	1/1:18,0:18:3.44:75,3,0	0/1:11,0:11:9.52:10,0,15	0/0:10,0:10:26.89:0,27,233
chr10	93074151	.	CA	C	888.76	PASS	AB=0.983;AC=26;AF=0.464;AN=56;BaseQRankSum=-7.909;DP=459;FS=5.750;HRun=10;HaplotypeScore=101.7224;InbreedingCoeff=0.1536;MQ=61.53;MQ0=9;MQRankSum=6.361;QD=3.13;ReadPosRankSum=-3.912;VQSLOD=-0.5215;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:58.94:0,59,295	0/0:6,0:5:9.02:0,9,95	0/0:44,0:13:22.40:0,22,183	0/0:24,0:9:22.67:0,23,162	0/1:19,1:20:47.36:54,0,47	1/1:26,0:26:19.68:145,20,0	1/1:15,0:15:23.78:111,24,0	0/1:17,0:16:8.50:38,0,9	0/1:14,0:14:11.97:12,0,69	0/1:23,0:23:46.34:114,0,46	0/1:21,0:21:22.54:23,0,111	1/1:6,0:6:11.14:58,11,0	0/1:17,0:17:15.45:47,0,15	1/1:7,0:7:10.90:47,11,0	0/0:15,0:15:32.68:0,33,285	0/1:15,2:17:19.43:19,0,75	0/0:21,0:21:34.50:0,34,304	0/0:10,0:10:23.84:0,24,214	0/1:19,0:18:47.27:47,0,86	0/0:22,0:21:7.54:0,8,115	0/1:8,0:8:6.77:7,0,40	1/1:7,0:7:8.22:36,8,0	0/1:8,0:8:0.17:60,0,0	1/1:12,0:12:20.20:93,20,0	1/1:15,0:15:8.35:71,8,0	0/1:20,1:21:44.86:76,0,45	0/1:11,0:11:18.53:19,0,58	0/0:10,0:10:27.04:0,27,286
chr10	93074342	.	GACACACACACACAC	G	1102.98	PASS	AB=1.000;AC=5;AF=0.096;AN=52;BaseQRankSum=1.418;DP=544;FS=1.214;HRun=0;HaplotypeScore=190.2635;InbreedingCoeff=0.5439;MQ=67.13;MQ0=11;MQRankSum=-4.599;QD=19.02;ReadPosRankSum=-1.407;VQSLOD=2.7430;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:12.03:0,12,438	1/1:3,4:6:8.96:253,9,0	./.	./.	0/0:16,0:16:9.50:0,10,407	0/0:20,0:26:17.26:0,17,794	0/0:22,0:31:30.10:0,30,1561	0/0:19,0:17:6.02:0,6,316	0/0:24,0:24:27.09:0,27,983	0/0:18,0:17:30.09:0,30,1293	0/0:13,0:13:9.03:0,9,421	0/0:15,0:15:14.67:0,15,538	0/0:15,0:14:14.37:0,14,597	0/0:19,0:19:14.91:0,15,605	1/1:12,14:24:24.55:916,25,0	0/0:22,0:22:45.14:0,45,1766	0/0:17,0:25:17.99:0,18,276	0/1:25,0:24:54.20:54,0,312	0/0:20,0:17:15.05:0,15,541	0/0:8,0:7:12.04:0,12,341	0/0:29,0:28:33.09:0,33,1299	0/0:4,0:4:3.01:0,3,145	0/0:7,0:6:6.49:0,6,283	0/0:18,0:18:15.05:0,15,829	0/0:8,0:14:9.48:0,9,285	0/0:24,0:24:40.38:0,40,1663	0/0:18,0:18:36.12:0,36,1399	0/0:5,0:11:12.04:0,12,588
chr10	93074386	.	CACAT	C	3128.83	PASS	AB=1.000;AC=20;AF=0.370;AN=54;BaseQRankSum=3.968;DP=530;FS=1.934;HRun=0;HaplotypeScore=112.4623;InbreedingCoeff=0.8012;MQ=58.92;MQ0=19;MQRankSum=2.636;QD=14.83;ReadPosRankSum=4.168;VQSLOD=3.5015;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:50.72:0,51,440	0/1:8,0:7:5.52:6,0,38	0/0:12,0:6:17.96:0,18,156	0/0:27,0:22:42.75:0,43,465	./.	0/0:19,0:17:21.04:0,21,360	0/0:28,0:28:60.02:0,60,792	0/0:30,0:26:75.27:0,75,645	1/1:3,19:22:17.68:351,18,0	1/1:11,0:11:24.35:159,24,0	1/1:14,1:15:6.12:56,6,0	0/0:15,0:14:26.98:0,27,350	0/0:13,0:12:27.28:0,27,272	0/0:17,0:17:30:0,30,342	0/1:27,0:25:17.67:18,0,212	1/1:9,10:20:57.07:832,57,0	0/0:25,0:24:22.44:0,22,285	0/0:21,0:17:52.01:0,52,421	1/1:1,12:11:32.66:286,33,0	1/1:1,12:12:6.02:103,6,0	1/1:34,2:35:51.53:544,52,0	0/0:3,0:3:8.88:0,9,64	0/0:8,0:8:20.98:0,21,268	0/0:25,0:25:41.95:0,42,422	0/0:16,0:15:24.01:0,24,263	1/1:0,24:24:59.67:554,60,0	1/1:19,2:20:10.90:422,11,0	0/0:9,0:9:12.04:0,12,271
chr10	93074388	.	CAT	C	2591.67	PASS	AC=18;AF=0.333;AN=54;BaseQRankSum=2.583;DP=527;FS=0.000;HRun=0;HaplotypeScore=100.5918;InbreedingCoeff=0.9470;MQ=59.16;MQ0=19;MQRankSum=3.964;QD=15.07;ReadPosRankSum=3.217;VQSLOD=3.0899;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:52.51:0,53,420	0/0:8,0:7:10.03:0,10,61	0/0:12,0:6:17.96:0,18,156	0/0:28,0:23:45.76:0,46,498	./.	0/0:17,0:15:21.03:0,21,259	0/0:26,0:26:56.99:0,57,580	0/0:29,0:25:70.14:0,70,611	1/1:22,0:22:17.81:175,18,0	1/1:0,10:10:29.90:306,30,0	1/1:1,14:15:8.94:114,9,0	0/0:15,0:14:26.95:0,27,281	0/0:13,0:12:27.25:0,27,233	0/0:18,0:18:31.94:0,32,285	0/0:28,0:26:44.93:0,45,318	1/1:20,0:20:56.98:508,57,0	0/0:28,0:26:51.72:0,52,369	0/0:23,0:19:57.11:0,57,430	1/1:13,0:11:32.70:255,33,0	1/1:13,0:12:6.01:57,6,0	1/1:35,0:33:62.30:500,62,0	0/0:3,0:3:8.88:0,9,64	0/0:8,0:8:21.45:0,21,221	0/0:23,0:23:44.84:0,45,377	0/0:16,0:15:24:0,24,215	1/1:24,0:24:59.83:490,60,0	1/1:20,0:19:45.52:393,46,0	0/0:9,0:9:12.02:0,12,174
chr10	93076368	.	A	AACACAC	5086.60	PASS	AB=1.000;AC=31;AF=0.596;AN=52;BaseQRankSum=0.965;DP=591;FS=1.173;HRun=0;HaplotypeScore=145.5017;InbreedingCoeff=0.8336;MQ=68.87;MQ0=16;MQRankSum=-4.308;QD=15.51;ReadPosRankSum=0.001;VQSLOD=4.4780;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:15.03:184,15,0	1/1:13,0:13:17.71:180,18,0	./.	./.	1/1:10,3:13:6.02:164,6,0	0/0:15,0:29:21.07:0,21,293	0/1:11,0:19:4.70:5,0,230	0/0:30,0:29:18.04:0,18,285	1/1:13,4:20:15.05:406,15,0	1/1:17,0:18:18.05:402,18,0	1/1:9,6:17:15.05:368,15,0	0/0:23,0:24:27.09:0,27,471	0/0:17,0:17:30.01:0,30,442	0/0:23,0:23:33.10:0,33,600	1/1:32,0:32:39.07:397,39,0	1/1:8,5:13:9.50:290,10,0	1/1:24,0:24:7.61:147,8,0	1/1:9,0:9:9.01:85,9,0	1/1:11,3:16:21.05:376,21,0	1/1:10,4:16:3.01:80,3,0	1/1:26,0:22:24:382,24,0	0/0:18,0:18:9.89:0,10,115	0/0:11,0:14:12.04:0,12,224	0/0:23,0:25:41.26:0,41,787	0/0:25,0:25:14.16:0,14,465	1/1:22,2:33:48.12:1002,48,0	1/1:15,7:24:20.17:620,20,0	0/0:5,0:14:9.03:0,9,126
chr10	93076388	.	C	CACAT	3233.06	PASS	AB=0.965;AC=18;AF=0.321;AN=56;BaseQRankSum=9.453;DP=653;FS=5.932;HRun=0;HaplotypeScore=125.9422;InbreedingCoeff=0.0573;MQ=52.41;MQ0=24;MQRankSum=-4.490;QD=9.40;ReadPosRankSum=9.195;VQSLOD=1.2874;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:27:1.35:1,0,270	1/1:1,13:14:17.98:480,18,0	0/1:27,0:7:15.12:15,0,81	0/0:24,0:10:26.95:0,27,223	0/0:13,0:13:20.85:0,21,169	0/0:33,0:33:24.86:0,25,539	0/0:34,0:32:65.76:0,66,582	0/0:31,0:30:58.26:0,58,778	0/1:20,0:18:99:128,0,101	0/1:24,0:20:49.41:49,0,241	0/1:15,0:15:91.74:178,0,92	0/0:26,0:25:65.96:0,66,763	0/0:21,0:21:56.92:0,57,719	0/0:30,0:29:74.90:0,75,919	1/1:3,26:29:39.13:1039,39,0	0/1:21,0:20:36.19:36,0,187	1/1:2,26:28:22.85:508,23,0	0/1:3,8:11:7.16:229,0,7	0/1:18,0:15:99:191,0,120	0/1:19,0:19:18.54:19,0,144	0/1:33,0:29:99:131,0,256	0/0:18,0:17:42.42:0,42,416	0/0:15,0:15:35.53:0,36,394	0/0:27,0:27:72.03:0,72,995	0/0:20,0:20:34.58:0,35,633	0/1:32,0:31:99:331,0,268	0/1:25,0:25:72.44:72,0,122	0/0:17,0:17:29.92:0,30,251
chr10	93079336	.	G	GTGTTTTGTTTTGTTT	7812.85	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=3.116;DP=738;FS=20.199;HRun=0;HaplotypeScore=294.8410;InbreedingCoeff=0.8152;MQ=72.94;MQ0=2;MQRankSum=-10.195;QD=53.51;ReadPosRankSum=-3.310;VQSLOD=2.9245;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:31:9.97:10,0,970	1/1:10,3:13:12.04:773,12,0	0/0:29,0:21:5.27:0,5,190	0/0:33,0:25:15.32:0,15,264	0/0:29,0:29:50.23:0,50,1812	0/0:36,0:37:81.26:0,81,2924	0/0:29,0:29:54.18:0,54,1866	0/0:31,0:31:27.09:0,27,815	0/0:22,0:22:39.13:0,39,1463	0/0:29,0:29:63.22:0,63,2166	0/0:23,0:23:39.12:0,39,1316	0/0:24,0:24:45.14:0,45,1699	0/0:38,0:38:87.25:0,87,3115	0/0:26,0:26:57.18:0,57,2146	1/1:29,8:40:51.17:3000,51,0	0/0:17,0:17:45.14:0,45,1708	1/1:27,9:39:39.12:2375,39,0	1/1:23,0:23:42.06:1655,42,0	0/0:30,0:29:27.09:0,27,832	0/0:26,0:26:57.20:0,57,2137	0/0:32,0:32:63.21:0,63,2512	0/0:19,0:19:36.12:0,36,1249	0/0:16,0:16:30.06:0,30,1047	0/0:30,0:30:66.23:0,66,2383	0/0:18,0:18:24.05:0,24,834	0/0:31,0:31:63.22:0,63,2515	0/0:17,0:16:30.10:0,30,1174	0/0:6,0:6:6.02:0,6,250
chr10	93080085	.	CT	C	1496.56	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=0.450;DP=450;FS=3.127;HRun=9;HaplotypeScore=79.0293;InbreedingCoeff=0.8679;MQ=65.80;MQ0=3;MQRankSum=0.897;QD=17.61;ReadPosRankSum=2.962;VQSLOD=4.0005;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:55.18:0,55,643	1/1:0,6:6:18.01:164,18,0	0/0:12,0:4:5.71:0,6,36	0/1:8,0:6:2.83:3,0,21	0/0:15,0:15:40.21:0,40,405	0/0:20,0:20:46.49:0,46,498	0/0:9,0:9:24.03:0,24,246	0/0:28,0:28:72.16:0,72,796	0/0:8,0:8:21.06:0,21,229	0/0:16,0:16:46.53:0,47,413	0/0:20,0:20:53.79:0,54,520	0/0:13,0:13:36.09:0,36,401	0/0:16,0:16:48.11:0,48,526	0/0:12,0:12:27.06:0,27,293	1/1:1,12:13:24.01:219,24,0	0/0:14,0:14:35.69:0,36,382	1/1:7,24:31:63.02:574,63,0	1/1:1,26:27:77.88:697,78,0	0/0:22,0:20:47.92:0,48,475	0/0:14,0:14:41.87:0,42,415	0/0:10,0:10:23.90:0,24,223	0/0:5,0:5:15.04:0,15,173	0/0:10,0:10:30.06:0,30,327	0/0:5,0:5:12.04:0,12,138	0/0:25,0:25:72.13:0,72,797	0/0:22,0:22:62.61:0,63,597	0/0:34,0:34:85.86:0,86,843	0/0:13,0:13:36.11:0,36,415
chr10	93080791	.	GC	G	1247.49	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.674;DP=676;FS=12.957;HRun=1;HaplotypeScore=68.4020;InbreedingCoeff=0.9834;MQ=84.21;MQ0=0;MQRankSum=-0.762;QD=33.72;ReadPosRankSum=1.831;VQSLOD=2.2258;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:96.32:1342,96,0	0/0:9,0:9:27.09:0,27,431	0/0:15,0:15:36.40:0,36,608	0/0:27,0:27:58.37:0,58,816	0/0:33,0:33:96.33:0,96,1535	0/0:28,0:28:84.27:0,84,1320	0/0:22,0:22:66.23:0,66,1055	0/0:37,0:37:99:0,108,1670	0/0:29,0:29:87.30:0,87,1389	0/0:25,0:25:75.25:0,75,1185	0/0:21,0:21:63.21:0,63,1006	0/0:27,0:27:81.28:0,81,1290	0/0:15,0:15:45.11:0,45,656	0/0:19,0:19:57.17:0,57,876	0/0:32,0:32:96.27:0,96,1481	0/0:22,0:22:66.20:0,66,1009	0/0:39,0:39:99:0,117,1870	0/0:21,0:21:63.18:0,63,980	0/0:25,0:25:72.23:0,72,1121	0/0:23,0:23:66.23:0,66,1052	0/0:25,0:25:75.26:0,75,1196	0/0:29,0:29:87.30:0,87,1377	0/0:18,0:18:54.18:0,54,856	0/0:19,0:19:57.19:0,57,907	0/0:16,0:16:48.16:0,48,765	0/0:24,0:24:72.25:0,72,1152	0/0:34,0:34:99:0,102,1627	0/0:5,0:5:15.05:0,15,240
chr10	93081810	.	GACTGTC	G	2453.78	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.851;DP=642;FS=12.221;HRun=0;HaplotypeScore=134.1827;InbreedingCoeff=0.9920;MQ=76.51;MQ0=0;MQRankSum=-10.029;QD=40.90;ReadPosRankSum=0.414;VQSLOD=2.7517;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,154,5353	1/1:0,11:11:30.10:704,30,0	0/0:14,0:14:38.80:0,39,1067	0/0:16,0:16:48.15:0,48,1386	0/0:15,0:15:45.15:0,45,1509	0/0:19,0:19:57.20:0,57,1921	0/0:21,0:21:60.21:0,60,2102	0/0:25,0:25:69.24:0,69,2400	0/0:30,0:30:87.27:0,87,2954	0/0:29,0:29:87.30:0,87,3025	0/0:20,0:20:60.21:0,60,2104	0/0:21,0:21:57.18:0,57,1927	0/0:27,0:27:78.27:0,78,2677	0/0:28,0:28:84.26:0,84,2741	1/1:2,21:23:45.15:1061,45,0	0/0:30,0:30:84.29:0,84,2982	1/1:3,11:14:21.07:495,21,0	1/1:1,11:12:15.05:352,15,0	0/0:16,0:16:48.16:0,48,1679	0/0:18,0:18:51.18:0,51,1776	0/0:35,0:35:99:0,105,3548	0/0:20,0:20:57.20:0,57,1998	0/0:18,0:18:51.17:0,51,1689	0/0:30,0:30:90.31:0,90,3114	0/0:32,0:32:93.31:0,93,3174	0/0:23,0:23:66.23:0,66,2206	0/0:34,0:34:99:0,102,3586	0/0:8,0:8:18.06:0,18,580
chr10	93082002	.	TCTC	T	2813.90	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.132;DP=673;FS=12.380;HRun=0;HaplotypeScore=97.3462;InbreedingCoeff=0.9943;MQ=93.03;MQ0=0;MQRankSum=-8.214;QD=34.32;ReadPosRankSum=3.192;VQSLOD=3.9205;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:72.25:1176,72,0	1/1:1,11:12:30.10:490,30,0	0/0:33,0:33:90.31:0,90,1948	0/0:26,0:26:63.22:0,63,1301	0/0:49,0:49:99:0,138,2998	0/0:37,0:37:99:0,105,2305	0/0:16,0:16:45.13:0,45,895	0/0:32,0:32:90.29:0,90,1931	0/0:17,0:17:48.16:0,48,1067	0/0:32,0:32:93.31:0,93,2009	0/0:25,0:25:72.25:0,72,1590	0/0:24,0:24:69.21:0,69,1435	0/0:23,0:23:66.23:0,66,1447	0/0:30,0:30:87.28:0,87,1883	1/1:1,18:19:48.16:783,48,0	0/0:27,0:27:81.28:0,81,1809	1/1:3,7:10:15.05:245,15,0	1/1:1,8:9:18.06:294,18,0	0/0:18,0:18:54.19:0,54,1145	0/0:28,0:28:81.28:0,81,1803	0/0:16,0:16:45.15:0,45,1005	0/0:26,0:26:75.26:0,75,1669	0/0:27,0:27:78.27:0,78,1711	0/0:17,0:17:45.15:0,45,1003	0/0:22,0:22:66.21:0,66,1413	0/0:22,0:22:66.23:0,66,1475	0/0:30,0:30:78.27:0,78,1701	0/0:14,0:14:42.14:0,42,938
chr10	93082906	.	GCA	G	3705.38	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.474;DP=619;FS=2.138;HRun=0;HaplotypeScore=83.6607;InbreedingCoeff=0.9815;MQ=82.40;MQ0=0;MQRankSum=-3.700;QD=46.32;ReadPosRankSum=2.564;VQSLOD=4.6325;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.31:0,93,1832	1/1:0,11:11:33.11:538,33,0	0/0:27,0:26:77.03:0,77,1443	0/0:23,0:23:59.98:0,60,1003	0/0:28,0:28:84.28:0,84,1673	0/0:28,0:27:81.25:0,81,1557	0/0:27,0:27:81.28:0,81,1635	0/0:21,0:21:63.17:0,63,1204	0/0:14,0:14:42.14:0,42,853	0/0:25,0:25:75.26:0,75,1506	0/0:23,0:23:69.22:0,69,1297	0/0:20,0:20:60.21:0,60,1200	0/0:27,0:27:81.28:0,81,1646	0/0:15,0:15:45.15:0,45,913	1/1:2,27:27:78.27:1273,78,0	0/0:30,0:30:90.31:0,90,1809	1/1:0,25:25:72.25:1170,72,0	1/1:0,15:15:45.15:724,45,0	0/0:21,0:21:63.22:0,63,1280	0/0:27,0:27:81.28:0,81,1645	0/0:21,0:21:63.22:0,63,1260	0/0:10,0:10:30.10:0,30,609	0/0:18,0:18:51.18:0,51,1036	0/0:21,0:21:63.19:0,63,1225	0/0:22,0:22:66.23:0,66,1317	0/0:24,0:24:72.25:0,72,1453	0/0:28,0:28:84.29:0,84,1646	0/0:4,0:4:8.37:0,8,182
chr10	93082993	.	CAAAAAG	C	2890.59	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.702;DP=581;FS=5.528;HRun=0;HaplotypeScore=140.1809;InbreedingCoeff=0.9895;MQ=78.25;MQ0=1;MQRankSum=-11.114;QD=52.56;ReadPosRankSum=2.190;VQSLOD=3.5661;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.20:0,57,1944	1/1:1,10:11:30.10:681,30,0	0/0:18,0:18:48.16:0,48,1493	0/0:10,0:10:20.94:0,21,630	0/0:31,0:31:90.31:0,90,3058	0/0:25,0:25:75.26:0,75,2567	0/0:27,0:27:69.22:0,69,2264	0/0:25,0:24:57.66:0,58,1823	0/0:18,0:18:51.18:0,51,1725	0/0:22,0:22:63.22:0,63,2086	0/0:27,0:27:75.26:0,75,2549	0/0:16,0:16:48.16:0,48,1616	0/0:23,0:23:69.21:0,69,2187	0/0:27,0:27:81.28:0,81,2767	1/1:2,21:21:57.20:1283,57,0	0/0:23,0:22:60.21:0,60,2082	1/1:1,14:15:39.09:812,39,0	1/1:2,4:6:12.04:273,12,0	0/0:18,0:18:54.17:0,54,1743	0/0:28,0:28:81.28:0,81,2742	0/0:8,0:8:24.08:0,24,834	0/0:24,0:24:69.24:0,69,2344	0/0:14,0:14:42.14:0,42,1421	0/0:20,0:20:57.18:0,57,1868	0/0:26,0:26:78.27:0,78,2634	0/0:30,0:29:81.26:0,81,2567	0/0:30,0:30:87.30:0,87,2961	0/0:15,0:15:45.15:0,45,1506
chr10	93083531	.	CTT	C	2480.60	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.458;DP=586;FS=0.000;HRun=6;HaplotypeScore=85.0990;InbreedingCoeff=0.9964;MQ=82.30;MQ0=2;MQRankSum=-0.734;QD=29.89;ReadPosRankSum=3.977;VQSLOD=3.1672;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.28:0,81,1459	1/1:0,10:10:24.08:320,24,0	0/0:29,0:26:47.10:0,47,675	0/0:34,0:27:44.37:0,44,952	0/0:35,0:35:99:0,99,1775	0/0:26,0:26:69.24:0,69,1242	0/0:13,0:13:39.12:0,39,654	0/0:29,0:29:81.27:0,81,1416	0/0:13,0:13:30.10:0,30,540	0/0:18,0:18:51.17:0,51,880	0/0:20,0:20:57.20:0,57,1026	0/0:20,0:20:54.19:0,54,966	0/0:13,0:13:39.13:0,39,688	0/0:15,0:15:45.15:0,45,805	1/1:0,20:20:54.18:720,54,0	0/0:17,0:17:44.24:0,44,781	1/1:1,31:32:72.23:961,72,0	1/1:0,21:21:48.16:640,48,0	0/0:18,0:18:48.16:0,48,854	0/0:27,0:27:75.26:0,75,1343	0/0:22,0:22:66.21:0,66,1155	0/0:6,0:6:18.05:0,18,297	0/0:21,0:21:60.21:0,60,1077	0/0:24,0:24:72.25:0,72,1289	0/0:18,0:18:48.16:0,48,865	0/0:24,0:24:66.22:0,66,1162	0/0:21,0:21:60.21:0,60,1074	0/0:8,0:8:24.07:0,24,405
chr10	93083592	.	G	GT	5142.23	PASS	AB=0.860;AC=23;AF=0.411;AN=56;BaseQRankSum=5.296;DP=518;FS=6.577;HRun=10;HaplotypeScore=81.4619;InbreedingCoeff=0.7806;MQ=62.41;MQ0=2;MQRankSum=-5.827;QD=19.40;ReadPosRankSum=0.671;VQSLOD=5.6412;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,19:25:57.14:607,57,0	0/0:6,0:6:14.98:0,15,123	0/1:21,0:10:0.80:1,0,81	0/1:20,0:12:2.76:3,0,27	1/1:8,17:26:10.06:481,10,0	0/0:23,0:23:53.90:0,54,440	0/0:10,0:10:4.14:0,4,131	0/0:22,0:22:56.87:0,57,462	1/1:3,10:13:33.08:350,33,0	0/1:6,15:22:10.10:478,0,10	1/1:2,12:14:36.09:383,36,0	0/0:14,0:14:29.90:0,30,240	0/0:13,0:13:1.33:0,1,215	0/0:12,0:12:26.95:0,27,222	0/0:26,0:26:71.90:0,72,588	1/1:5,11:16:30.08:320,30,0	0/0:24,0:25:55.97:0,56,449	0/0:25,0:25:50.92:0,51,415	1/1:12,15:26:51.96:518,52,0	1/1:4,17:21:60.14:629,60,0	1/1:7,4:11:15.04:160,15,0	0/0:13,0:13:38.95:0,39,320	0/0:19,0:20:55.72:0,56,442	0/0:13,0:13:32.92:0,33,266	0/0:20,0:20:53.92:0,54,443	1/1:6,18:25:57.09:610,57,0	1/1:6,17:23:38.49:602,38,0	0/0:11,0:11:26.88:0,27,222
chr10	93083629	.	A	AT	8203.43	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-1.024;DP=588;FS=3.995;HRun=2;HaplotypeScore=77.7895;InbreedingCoeff=0.9891;MQ=54.63;MQ0=4;MQRankSum=-4.793;QD=36.30;ReadPosRankSum=-0.610;VQSLOD=5.1169;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:87.27:0,87,1078	0/0:4,0:4:9.03:0,9,110	0/0:18,0:8:24.07:0,24,287	0/0:19,0:12:33.03:0,33,377	1/1:1,32:32:72.11:966,72,0	0/0:25,0:25:66.19:0,66,804	0/0:6,0:6:18.06:0,18,223	0/0:26,0:26:69.19:0,69,829	1/1:1,7:8:21.07:302,21,0	1/1:2,27:29:81.26:1147,81,0	1/1:1,22:23:69.22:974,69,0	0/0:14,0:14:39.12:0,39,483	0/0:17,0:17:48.15:0,48,595	0/0:17,0:16:48.15:0,48,595	0/0:32,0:29:84.24:0,84,1027	1/1:2,20:21:51.17:734,51,0	0/0:28,0:28:66.21:0,66,818	0/0:26,0:23:48.11:0,48,578	1/1:1,23:23:66.21:931,66,0	1/1:2,19:21:54.18:776,54,0	1/1:0,14:13:33.11:475,33,0	0/0:22,0:22:66.20:0,66,807	0/0:22,0:21:57.17:0,57,694	0/0:18,0:18:42.13:0,42,521	0/0:27,0:27:78.22:0,78,953	1/1:4,20:24:60.20:862,60,0	1/1:2,26:28:72.24:1036,72,0	0/0:10,0:10:30.07:0,30,347
chr10	93083783	.	G	GT	1383.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.335;DP=668;FS=2.968;HRun=5;HaplotypeScore=64.0833;InbreedingCoeff=0.9897;MQ=56.15;MQ0=11;MQRankSum=1.849;QD=31.45;ReadPosRankSum=2.292;VQSLOD=4.4883;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,39:42:99:1479,114,0	0/0:8,0:8:21.05:0,21,226	0/0:35,1:21:51.10:0,51,527	0/0:26,0:16:42.09:0,42,441	0/0:30,0:30:87.19:0,87,919	0/0:23,0:23:63.15:0,63,675	0/0:24,0:24:63.15:0,63,675	0/0:29,0:27:66.15:0,66,703	0/0:15,0:14:33.08:0,33,351	0/0:20,0:20:57.14:0,57,610	0/0:19,0:18:51.13:0,51,548	0/0:23,0:23:54.09:0,54,566	0/0:19,0:19:51.10:0,51,531	0/0:20,0:19:54.13:0,54,580	0/0:34,0:33:87.19:0,87,925	0/0:19,0:17:51.10:0,51,537	0/0:32,0:31:84.19:0,84,892	0/0:21,0:20:48.10:0,48,505	0/0:27,0:27:75.16:0,75,795	0/0:23,0:20:51.12:0,51,547	0/0:42,0:42:99:0,102,1093	0/0:9,0:8:24.04:0,24,249	0/0:16,0:16:48.12:0,48,515	0/0:23,0:23:57.14:0,57,612	0/0:23,0:22:60.13:0,60,635	0/0:28,0:26:66.15:0,66,701	0/0:26,0:26:69.17:0,69,741	0/0:8,0:7:21.05:0,21,226
chr10	93084521	.	C	CCT	587.32	PASS	AB=0.956;AC=35;AF=0.729;AN=48;BaseQRankSum=-1.553;DP=445;FS=3.214;HRun=0;HaplotypeScore=77.8473;InbreedingCoeff=0.2272;MQ=63.87;MQ0=26;MQRankSum=-1.886;QD=1.94;ReadPosRankSum=-2.015;VQSLOD=1.5735;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:0:0,0,0	./.	./.	./.	1/1:14,0:13:3.01:41,3,0	1/1:11,0:11:9:90,9,0	1/1:15,6:20:0.47:1,0,0	1/1:31,0:30:8.55:62,9,0	1/1:15,0:15:9.02:94,9,0	0/0:12,0:10:2.22:0,2,20	./.	1/1:9,0:9:3:26,3,0	0/1:15,0:15:23.49:61,0,23	0/1:15,0:15:0.05:0,0,0	0/1:17,0:17:12.88:13,0,86	0/1:14,0:17:6.03:13,0,6	0/0:16,0:22:4.66:0,5,19	0/0:7,0:7:6:0,6,55	1/1:18,0:17:2.98:21,3,0	1/1:9,0:9:2.99:26,3,0	1/1:18,0:17:6.01:68,6,0	1/1:15,0:15:2.94:24,3,0	1/1:9,0:9:1.50:4,1,0	1/1:17,0:17:6.38:67,6,0	1/1:13,0:13:3:25,3,0	1/1:14,0:13:7.73:72,8,0	1/1:8,0:6:1.71:4,2,0	0/0:14,0:13:2.54:0,3,27
chr10	93085423	.	C	CTG	4416.77	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-13.678;DP=670;FS=10.076;HRun=0;HaplotypeScore=74.4469;InbreedingCoeff=0.9996;MQ=87.38;MQ0=0;MQRankSum=-3.182;QD=45.07;ReadPosRankSum=3.403;VQSLOD=6.2233;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,12:13:33.11:584,33,0	1/1:0,16:16:48.16:852,48,0	0/0:25,0:25:69.13:0,69,879	0/0:22,0:22:60.17:0,60,787	0/0:36,0:36:99:0,99,1360	0/0:23,0:23:66.21:0,66,891	0/0:23,0:23:57.18:0,57,766	0/0:34,0:34:84.23:0,84,1078	0/0:16,0:16:48.16:0,48,659	0/0:35,0:35:99:0,105,1384	0/0:21,0:21:60.20:0,60,825	0/0:18,0:18:54.18:0,54,742	0/0:32,0:32:93.27:0,93,1242	0/0:23,0:23:69.23:0,69,947	1/1:1,35:36:99:1757,99,0	0/0:39,0:38:99:0,111,1523	1/1:5,17:22:42.14:745,42,0	1/1:1,10:11:27.09:479,27,0	0/0:22,0:22:57.18:0,57,765	0/0:29,0:29:81.25:0,81,1093	0/0:20,0:20:57.19:0,57,781	0/0:20,0:20:54.18:0,54,741	0/0:27,0:27:72.24:0,72,989	0/0:16,0:16:42.12:0,42,559	0/0:27,0:27:78.25:0,78,1055	0/0:16,0:16:45.14:0,45,603	0/0:33,0:32:93.31:0,93,1277	0/0:15,0:15:30.10:0,30,412
chr10	93085875	.	GGAT	G	2779.08	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.622;DP=769;FS=11.963;HRun=0;HaplotypeScore=105.9871;InbreedingCoeff=0.9992;MQ=88.37;MQ0=0;MQRankSum=-0.460;QD=36.09;ReadPosRankSum=1.598;VQSLOD=4.3255;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,163,3467	1/1:1,12:13:33.11:523,33,0	0/0:25,0:25:72.24:0,72,1414	0/0:31,0:31:58.09:0,58,1288	0/0:36,0:36:99:0,102,2164	0/0:25,0:25:72.25:0,72,1557	0/0:28,0:28:78.27:0,78,1655	0/0:17,0:17:48.16:0,48,1039	0/0:38,0:38:99:0,105,2217	0/0:35,0:35:92.80:0,93,1990	0/0:22,0:22:63.22:0,63,1360	0/0:17,0:17:48.16:0,48,1034	0/0:20,0:20:54.19:0,54,1180	0/0:30,0:30:84.29:0,84,1833	1/1:0,30:30:81.28:1282,81,0	0/0:25,0:25:72.23:0,72,1524	1/1:2,21:23:48.16:753,48,0	1/1:1,10:11:24.08:381,24,0	0/0:21,0:21:57.20:0,57,1220	0/0:27,0:27:75.26:0,75,1622	0/0:68,0:68:99:0,190,4095	0/0:33,0:33:90.31:0,90,1905	0/0:24,0:24:66.23:0,66,1397	0/0:17,0:17:42.14:0,42,917	0/0:26,0:26:72.25:0,72,1558	0/0:27,0:27:81.28:0,81,1744	0/0:32,0:32:84.29:0,84,1790	0/0:10,0:10:30.10:0,30,655
chr10	93087945	.	T	TA	592.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.932;DP=515;FS=11.641;HRun=7;HaplotypeScore=48.7731;InbreedingCoeff=0.8976;MQ=63.01;MQ0=2;MQRankSum=-0.492;QD=20.42;ReadPosRankSum=-0.391;VQSLOD=1.9497;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:29:57.17:687,57,0	0/0:10,0:10:30.05:0,30,289	0/0:14,0:10:21.05:0,21,208	0/0:11,0:7:11.98:0,12,107	0/0:19,0:19:43.11:0,43,488	0/0:21,0:21:51.08:0,51,492	0/0:9,0:9:24.02:0,24,225	0/0:39,0:38:99:0,108,1027	0/0:18,0:18:42.03:0,42,390	0/0:23,0:23:63.09:0,63,605	0/0:16,0:16:48.01:0,48,444	0/0:11,0:11:30:0,30,276	0/0:24,0:24:63.10:0,63,608	0/0:14,0:14:36.06:0,36,348	0/0:30,0:30:84.10:0,84,796	0/0:16,0:16:33.03:0,33,312	0/0:31,0:30:78.10:0,78,745	0/0:12,0:11:15.02:0,15,145	0/0:19,0:18:51.06:0,51,486	0/0:19,0:19:54.06:0,54,511	0/0:10,0:10:30.04:0,30,285	0/0:4,0:4:9.01:0,9,83	0/0:14,0:14:33.05:0,33,319	0/0:17,0:17:42.01:0,42,393	0/0:17,0:17:51.07:0,51,489	0/0:22,0:22:54.08:0,54,521	0/0:28,0:28:72.07:0,72,681	0/0:18,0:18:48.08:0,48,463
chr10	93088759	.	TC	T	878.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.764;DP=619;FS=1.675;HRun=2;HaplotypeScore=67.8515;InbreedingCoeff=0.8505;MQ=88.00;MQ0=0;MQRankSum=-4.622;QD=29.30;ReadPosRankSum=2.688;VQSLOD=3.4312;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:75.24:974,75,0	0/0:10,0:10:30.10:0,30,449	0/0:22,0:22:60.18:0,60,838	0/0:22,0:22:60.43:0,60,813	0/0:28,0:28:81.27:0,81,1188	0/0:29,0:29:78.26:0,78,1165	0/0:24,0:24:66.22:0,66,985	0/0:19,0:19:54.18:0,54,809	0/0:15,0:15:42.14:0,42,629	0/0:30,0:30:87.29:0,87,1302	0/0:16,0:16:48.15:0,48,700	0/0:22,0:22:66.22:0,66,987	0/0:24,0:24:69.23:0,69,1025	0/0:19,0:19:57.19:0,57,850	0/0:23,0:23:69.23:0,69,1033	0/0:26,0:26:78.26:0,78,1166	0/0:17,0:17:51.17:0,51,761	0/0:13,0:13:39.12:0,39,564	0/0:22,0:22:63.20:0,63,918	0/0:30,0:30:87.29:0,87,1296	0/0:22,0:22:66.20:0,66,947	0/0:19,0:19:57.19:0,57,853	0/0:22,0:22:60.20:0,60,898	0/0:25,0:25:75.21:0,75,1079	0/0:23,0:23:66.20:0,66,951	0/0:30,0:29:90.28:0,90,1326	0/0:35,0:34:99:0,105,1557	0/0:1,0:1:3.01:0,3,44
chr10	93089152	.	C	CTCTGGGGG	21490.56	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-4.669;DP=798;FS=0.316;HRun=0;HaplotypeScore=203.3390;InbreedingCoeff=0.9997;MQ=76.77;MQ0=0;MQRankSum=-16.804;QD=75.41;ReadPosRankSum=-1.926;VQSLOD=4.4460;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,123,3113	0/0:10,0:10:30.10:0,30,799	0/0:27,0:27:60.21:0,60,1526	0/0:22,0:22:51.17:0,51,1250	1/1:5,18:24:54.18:2248,54,0	0/0:28,0:28:75.24:0,75,1915	0/0:24,0:24:60.19:0,60,1512	0/0:36,0:36:75.25:0,75,1896	1/1:16,19:37:75.26:3040,75,0	1/1:15,13:33:75.22:2662,75,0	1/1:6,9:17:27.09:1148,27,0	0/0:32,0:32:78.24:0,78,1967	0/0:27,0:27:78.27:0,78,2049	0/0:40,0:40:99:0,105,2658	0/0:35,0:35:87.29:0,87,2229	1/1:12,15:28:48.16:2012,48,0	0/0:32,0:32:90.31:0,90,2357	0/0:29,0:29:78.24:0,78,1929	1/1:15,10:27:51.16:1875,51,0	1/1:12,15:28:51.18:2105,51,0	1/1:16,11:27:32.35:1394,32,0	0/0:22,0:22:60.21:0,60,1511	0/0:23,0:23:57.14:0,57,1351	0/0:34,0:33:90.27:0,90,2284	0/0:29,0:29:78.27:0,78,2023	1/1:9,19:29:72.21:2586,72,0	1/1:20,15:35:60.21:2421,60,0	0/0:13,0:13:39.13:0,39,1022
chr10	93089803	.	GC	G	1612.84	PASS	AB=0.556;AC=19;AF=0.352;AN=54;BaseQRankSum=11.920;DP=313;FS=1.081;HRun=2;HaplotypeScore=81.5816;InbreedingCoeff=0.8747;MQ=45.22;MQ0=11;MQRankSum=-9.187;QD=15.07;ReadPosRankSum=-0.811;VQSLOD=3.1013;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:6:12.02:0,12,169	0/0:7,0:7:21.07:0,21,304	./.	0/0:2,0:2:6:0,6,68	1/1:0,12:12:26.87:203,27,0	0/0:20,0:20:42.14:0,42,629	0/0:22,0:20:54.18:0,54,808	0/0:18,0:16:45.15:0,45,671	1/1:1,3:3:8.98:72,9,0	1/1:3,10:12:26.93:233,27,0	1/1:6,8:12:22.97:182,23,0	0/0:14,0:14:36.12:0,36,539	0/0:10,0:10:27.09:0,27,405	0/0:8,0:8:24.08:0,24,360	0/0:11,0:10:24.04:0,24,325	1/1:4,8:11:29.95:267,30,0	0/0:16,0:14:39.13:0,39,584	0/0:14,0:14:42.14:0,42,629	1/1:4,4:6:8.92:68,9,0	1/1:2,14:15:35.92:288,36,0	0/1:2,8:9:23.93:126,0,24	0/0:8,0:8:17.75:0,18,269	0/0:12,0:10:30.09:0,30,429	0/0:15,0:14:39.13:0,39,584	0/0:12,0:10:30.10:0,30,449	1/1:3,6:9:21:195,21,0	1/1:1,8:9:23.17:186,23,0	0/0:10,0:9:24.08:0,24,360
chr10	93089806	.	TAGCAAGCGCA	T	5938.43	PASS	AB=0.556;AC=19;AF=0.365;AN=52;BaseQRankSum=12.352;DP=303;FS=3.231;HRun=0;HaplotypeScore=113.1145;InbreedingCoeff=0.8905;MQ=44.90;MQ0=13;MQRankSum=-10.386;QD=62.51;ReadPosRankSum=-0.049;VQSLOD=4.7014;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:7:17.51:0,18,587	0/0:7,0:7:21.07:0,21,1016	./.	./.	1/1:1,11:12:27.09:752,27,0	0/0:19,0:19:42.13:0,42,1909	0/0:22,0:20:57.20:0,57,2700	0/0:18,0:15:45.15:0,45,2028	1/1:1,3:3:9.03:255,9,0	1/1:0,10:10:27.09:784,27,0	1/1:4,7:9:21.07:567,21,0	0/0:13,0:13:36.10:0,36,1476	0/0:10,0:10:24.08:0,24,1082	0/0:9,0:9:24.08:0,24,1031	0/0:11,0:10:27.09:0,27,1297	1/1:3,8:10:27.07:700,27,0	0/0:16,0:14:39.13:0,39,1944	0/0:14,0:14:42.14:0,42,2197	1/1:2,4:3:9.03:252,9,0	1/1:1,14:14:36.12:1020,36,0	0/1:2,8:9:99:512,0,135	0/0:9,0:9:20.27:0,20,852	0/0:13,0:11:30.10:0,30,1320	0/0:16,0:15:42.14:0,42,2009	0/0:12,0:10:30.10:0,30,1599	1/1:1,6:7:18.06:522,18,0	1/1:0,8:8:21.07:574,21,0	0/0:10,0:9:21.07:0,21,1120
chr10	93089929	.	T	TTTTG	7910.18	PASS	AB=0.733;AC=19;AF=0.339;AN=56;BaseQRankSum=-11.416;DP=594;FS=0.449;HRun=0;HaplotypeScore=100.9604;InbreedingCoeff=0.7853;MQ=61.68;MQ0=7;MQRankSum=3.690;QD=32.82;ReadPosRankSum=0.490;VQSLOD=4.6503;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:26:24.03:0,24,223	0/0:1,0:5:3:0,3,28	0/0:39,0:24:12.04:0,12,181	0/0:30,0:20:24.08:0,24,348	0/1:11,12:24:6.79:723,0,7	0/0:17,0:17:24.08:0,24,377	0/0:26,0:26:39.86:0,40,698	0/0:21,0:20:24.08:0,24,353	1/1:5,7:12:15.05:360,15,0	1/1:5,16:22:44.88:921,45,0	1/1:3,17:19:45.15:987,45,0	0/0:22,0:23:60.19:0,60,926	0/0:10,0:10:21.07:0,21,334	0/0:15,0:16:36.12:0,36,554	0/0:3,0:22:33.04:0,33,307	1/1:5,15:20:27.09:649,27,0	0/1:8,0:23:1.37:1,0,146	0/0:3,0:10:6.01:0,6,56	1/1:15,6:20:21.07:418,21,0	1/1:6,13:19:39.11:849,39,0	1/1:3,13:16:27.09:629,27,0	0/0:21,0:21:42.13:0,42,648	0/0:17,0:18:39.13:0,39,602	0/0:29,0:29:75.19:0,75,1145	0/0:20,0:21:48.16:0,48,747	1/1:9,22:31:60.21:1411,60,0	0/1:6,26:32:3.17:963,0,3	0/0:18,0:19:57.19:0,57,892
chr10	93091139	.	T	TACAC	7848.86	PASS	AB=0.917;AC=31;AF=0.554;AN=56;BaseQRankSum=-7.021;DP=587;FS=6.363;HRun=0;HaplotypeScore=111.5277;InbreedingCoeff=0.6941;MQ=64.75;MQ0=6;MQRankSum=-2.011;QD=21.62;ReadPosRankSum=-0.727;VQSLOD=4.2039;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:28:5.99:105,6,0	1/1:7,0:6:1.86:20,2,0	0/1:35,0:17:12.41:12,0,109	0/0:24,0:17:15.04:0,15,224	1/1:6,18:25:26.71:596,27,0	0/0:21,0:21:44.94:0,45,620	0/0:22,0:22:42.13:0,42,663	0/0:34,0:36:44.94:0,45,592	1/1:5,14:22:38.60:808,39,0	1/1:7,11:21:47.86:861,48,0	1/1:6,19:27:45.15:1095,45,0	0/0:12,0:12:30.09:0,30,463	0/0:17,0:20:51.13:0,51,743	0/0:20,0:21:51.17:0,51,805	1/1:22,0:21:6:92,6,0	1/1:2,12:18:27.09:657,27,0	1/1:12,0:12:8.90:97,9,0	1/1:16,0:15:2.48:224,2,0	0/1:12,4:18:70.94:367,0,71	1/1:9,18:29:27.56:657,28,0	1/1:10,16:29:24.55:584,25,0	0/0:12,0:12:33.01:0,33,459	0/0:11,0:11:27.06:0,27,390	0/0:30,0:30:63.22:0,63,1029	0/0:15,0:15:33.08:0,33,499	1/1:7,15:26:63.11:1186,63,0	1/1:6,10:18:20.59:450,21,0	0/1:9,0:9:37.51:38,0,224
chr10	93091903	.	T	TTC	5172.53	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.505;DP=681;FS=2.446;HRun=0;HaplotypeScore=93.5383;InbreedingCoeff=0.9998;MQ=85.97;MQ0=0;MQRankSum=-5.139;QD=48.80;ReadPosRankSum=3.961;VQSLOD=6.0105;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,1927	1/1:0,10:10:30.10:554,30,0	0/0:24,0:23:60.17:0,60,867	0/0:26,0:26:66.17:0,66,930	0/0:29,0:29:78.25:0,78,1147	0/0:30,0:30:90.31:0,90,1378	0/0:25,0:25:75.25:0,75,1130	0/0:24,0:24:66.20:0,66,953	0/0:20,0:20:57.19:0,57,868	0/0:22,0:22:66.22:0,66,992	0/0:14,0:14:39.13:0,39,593	0/0:20,0:20:57.18:0,57,841	0/0:22,0:22:63.21:0,63,944	0/0:30,0:30:87.30:0,87,1330	1/1:1,30:31:87.30:1677,87,0	0/0:16,0:16:48.16:0,48,734	1/1:3,30:34:81.28:1540,81,0	1/1:1,29:31:75.25:1400,75,0	0/0:24,0:24:72.24:0,72,1084	0/0:22,0:22:57.19:0,57,871	0/0:33,0:33:96.28:0,96,1423	0/0:20,0:20:60.19:0,60,894	0/0:20,0:20:57.16:0,57,829	0/0:31,0:31:90.26:0,90,1309	0/0:19,0:19:57.19:0,57,872	0/0:21,0:21:63.21:0,63,945	0/0:24,0:24:69.16:0,69,986	0/0:17,0:17:48.16:0,48,735
chr10	93092766	.	T	TGCTTA	6323.56	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.836;DP=635;FS=6.078;HRun=0;HaplotypeScore=107.7732;InbreedingCoeff=0.9982;MQ=84.01;MQ0=0;MQRankSum=-4.111;QD=81.07;ReadPosRankSum=2.818;VQSLOD=7.0881;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,3271	1/1:3,5:10:24.05:719,24,0	0/0:21,0:21:58.44:0,58,1293	0/0:26,0:26:54.20:0,54,1348	0/0:24,0:24:72.25:0,72,1651	0/0:21,0:21:63.20:0,63,1422	0/0:22,0:22:63.20:0,63,1357	0/0:28,0:28:84.28:0,84,1845	0/0:28,0:28:84.27:0,84,1912	0/0:25,0:25:75.20:0,75,1527	0/0:18,0:18:54.19:0,54,1235	0/0:22,0:22:66.21:0,66,1451	0/0:21,0:21:63.20:0,63,1423	0/0:22,0:22:63.22:0,63,1446	1/1:2,20:25:63.21:1973,63,0	0/0:33,0:33:99:0,99,2262	1/1:0,32:34:87.30:2832,87,0	1/1:1,8:9:24.08:799,24,0	0/0:24,0:24:72.23:0,72,1587	0/0:22,0:22:66.23:0,66,1496	0/0:26,0:26:78.25:0,78,1729	0/0:19,0:19:57.16:0,57,1217	0/0:18,0:18:48.16:0,48,1117	0/0:8,0:8:24.08:0,24,559	0/0:13,0:13:39.13:0,39,909	0/0:31,0:31:90.29:0,90,1992	0/0:23,0:23:66.18:0,66,1464	0/0:12,0:12:36.12:0,36,839
chr10	93094577	.	C	CTTTT	8446.99	PASS	AB=0.559;AC=29;AF=0.518;AN=56;BaseQRankSum=1.632;DP=520;FS=3.976;HRun=10;HaplotypeScore=88.4832;InbreedingCoeff=0.9198;MQ=55.46;MQ0=8;MQRankSum=-6.925;QD=29.74;ReadPosRankSum=0.517;VQSLOD=3.4561;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:17:5.06:106,0,5	1/1:1,0:9:15.67:97,16,0	0/0:20,0:13:29.88:0,30,382	0/0:13,0:9:10.73:0,11,101	1/1:1,16:19:30.02:541,30,0	0/0:26,0:25:60.11:0,60,847	0/0:18,0:17:42.09:0,42,586	0/0:26,0:25:52.55:0,53,647	1/1:10,10:20:6.60:823,7,0	1/1:3,9:12:24.08:450,24,0	1/1:6,10:17:39.13:748,39,0	0/0:19,0:20:57.15:0,57,782	0/0:7,0:7:15:0,15,212	0/0:19,0:19:42.56:0,43,613	1/1:1,0:14:28.63:184,29,0	1/1:3,14:20:36.12:781,36,0	1/1:1,0:28:68.44:425,68,0	1/1:8,0:18:37.50:245,37,0	1/1:17,4:22:47.92:704,48,0	1/1:4,12:17:39.09:771,39,0	1/1:3,6:9:22.32:432,22,0	0/0:17,0:16:40.30:0,40,553	0/0:17,0:18:45.12:0,45,635	0/0:24,0:24:57.18:0,57,806	0/0:17,0:18:37.61:0,38,513	1/1:9,14:28:63.17:1147,63,0	1/1:4,19:23:45.62:994,46,0	0/0:8,0:7:15:0,15,211
chr10	93095800	.	CT	C	1768.55	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=7.300;DP=526;FS=2.128;HRun=10;HaplotypeScore=61.8723;InbreedingCoeff=0.8980;MQ=72.91;MQ0=1;MQRankSum=-0.785;QD=16.38;ReadPosRankSum=1.431;VQSLOD=4.1863;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:90.11:0,90,977	1/1:0,13:13:29.99:260,30,0	0/1:15,0:10:3.34:3,0,137	0/0:23,0:21:37.26:0,37,282	0/0:19,0:19:51.03:0,51,535	0/0:17,0:16:42.11:0,42,465	0/0:17,0:17:45.12:0,45,498	0/0:6,0:25:57.35:0,57,310	0/0:17,0:17:45.12:0,45,496	0/0:20,1:21:25.08:0,25,505	0/0:16,0:16:45.11:0,45,490	0/0:7,0:7:20.27:0,20,206	0/0:15,0:15:36.07:0,36,382	0/0:10,0:10:27.06:0,27,289	1/1:3,17:20:44.99:391,45,0	0/0:21,0:21:51.14:0,51,564	1/1:2,29:31:74.98:651,75,0	1/1:2,27:29:71.98:625,72,0	0/0:17,0:19:47.80:0,48,493	0/0:23,0:23:66.18:0,66,730	0/0:8,0:8:18.05:0,18,199	0/0:12,0:12:21.04:0,21,224	0/0:16,0:16:48.09:0,48,517	0/0:7,0:7:15.04:0,15,166	0/0:23,0:23:63.17:0,63,697	0/0:23,0:23:60.15:0,60,656	0/0:29,0:29:75.20:0,75,828	0/0:13,0:13:39.11:0,39,431
chr10	93095896	.	CT	C	2724.49	PASS	AB=0.611;AC=50;AF=0.893;AN=56;BaseQRankSum=-1.071;DP=527;FS=14.630;HRun=14;HaplotypeScore=91.7204;InbreedingCoeff=0.5071;MQ=72.94;MQ0=4;MQRankSum=-0.692;QD=5.83;ReadPosRankSum=4.203;VQSLOD=0.9760;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:17.82:86,18,0	1/1:9,0:9:10.42:37,10,0	0/0:39,0:18:26.55:0,27,196	0/0:21,0:10:11.41:0,11,67	1/1:20,0:20:24.25:79,24,0	1/1:1,8:11:24.90:156,25,0	0/1:2,8:10:3.86:85,0,4	1/1:10,22:35:67.82:430,68,0	1/1:17,0:16:16.07:61,16,0	1/1:25,0:25:26.70:89,27,0	1/1:22,0:22:22.64:82,23,0	1/1:0,12:12:20.82:144,21,0	1/1:8,12:22:8.93:189,9,0	0/1:5,5:10:15.99:50,0,16	1/1:25,0:24:26.47:68,26,0	1/1:15,0:15:20.19:63,20,0	1/1:18,0:18:18.83:48,19,0	1/1:21,0:21:4.39:73,4,0	1/1:23,0:23:7.03:79,7,0	1/1:24,0:24:7.92:88,8,0	1/1:10,0:10:17.73:69,18,0	1/1:2,5:7:8.18:60,8,0	1/1:5,15:20:41.62:288,42,0	1/1:1,11:12:29.74:205,30,0	1/1:7,10:17:14.78:103,15,0	1/1:26,0:26:11.60:83,12,0	1/1:15,0:14:17.34:76,17,0	1/1:2,4:7:10.96:68,11,0
chr10	93095908	.	TTTA	T	2732.69	PASS	AB=0.976;AC=24;AF=0.429;AN=56;BaseQRankSum=8.864;DP=532;FS=2.531;HRun=0;HaplotypeScore=118.9648;InbreedingCoeff=0.5494;MQ=74.17;MQ0=4;MQRankSum=-4.225;QD=8.96;ReadPosRankSum=4.991;VQSLOD=3.2251;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,6:38:23.04:457,23,0	1/1:8,0:8:8.18:66,8,0	0/0:44,0:17:28.25:0,28,536	0/0:27,0:14:2.02:0,2,148	1/1:20,1:21:22.41:212,22,0	0/0:12,0:11:32.25:0,32,297	0/0:10,0:10:21.06:0,21,264	0/0:36,0:36:88.60:0,89,834	0/1:15,1:15:1.35:72,0,1	0/1:24,0:24:7.04:171,0,7	1/1:19,2:21:4.71:206,5,0	0/0:14,0:14:27.07:0,27,315	0/0:16,0:16:41.29:0,41,445	0/0:9,0:9:21.05:0,21,263	1/1:20,4:23:52.57:374,53,0	1/1:16,0:16:33.66:180,34,0	1/1:22,0:22:59.11:289,59,0	0/1:21,0:21:53.88:92,0,54	0/1:20,2:22:14.15:232,0,14	0/1:22,0:22:41.06:131,0,41	1/1:11,0:11:15.87:91,16,0	0/0:6,0:6:16.18:0,16,137	0/0:16,0:16:45.10:0,45,474	0/0:13,0:13:36.03:0,36,360	0/0:14,0:14:24.05:0,24,252	1/1:22,3:25:10.59:302,11,0	0/1:14,0:13:9.80:60,0,10	0/0:9,0:9:23.62:0,24,229
chr10	93095909	.	TTA	T	8407.64	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-2.669;DP=519;FS=1.227;HRun=0;HaplotypeScore=90.0950;InbreedingCoeff=0.9340;MQ=73.82;MQ0=4;MQRankSum=-3.455;QD=28.50;ReadPosRankSum=0.919;VQSLOD=5.8725;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,19:36:67.97:971,68,0	1/1:2,5:8:20.93:229,21,0	0/0:43,0:16:18.16:0,18,381	0/0:27,0:14:1.54:0,2,130	1/1:8,12:20:58.86:592,59,0	0/0:12,0:11:23.92:0,24,166	0/0:11,0:11:23.63:0,24,186	0/0:35,1:36:1.73:0,2,395	1/1:6,9:14:35.90:395,36,0	1/1:8,16:24:62.19:703,62,0	1/1:9,9:18:50.86:537,51,0	0/0:14,0:14:26.46:0,26,183	0/0:16,0:16:33.70:0,34,244	0/0:9,0:9:17.79:0,18,158	1/1:10,14:23:65.84:714,66,0	1/1:5,10:16:47.84:523,48,0	1/1:9,13:22:65.30:698,65,0	1/1:11,10:21:32.04:497,32,0	1/1:11,11:22:37.20:598,37,0	1/1:10,11:21:34.94:558,35,0	1/1:4,7:11:32.33:339,32,0	0/0:5,0:5:14.69:0,15,89	0/0:16,0:16:43.39:0,43,252	0/0:13,0:13:35.03:0,35,209	0/0:13,0:13:23.62:0,24,163	1/1:10,13:23:41.11:659,41,0	1/1:6,8:14:37.96:394,38,0	0/0:9,0:9:20.44:0,20,145
chr10	93095910	.	TA	T	4726.74	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=6.357;DP=512;FS=5.531;HRun=4;HaplotypeScore=94.9880;InbreedingCoeff=0.9373;MQ=74.95;MQ0=4;MQRankSum=-4.830;QD=15.01;ReadPosRankSum=2.537;VQSLOD=4.0006;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:91.41:586,91,0	1/1:8,0:8:17.04:99,17,0	0/0:42,0:16:17.01:0,17,278	0/1:27,0:15:1.34:1,0,84	1/1:20,1:21:53.04:360,53,0	0/0:12,0:11:17.16:0,17,108	0/0:11,0:11:18.28:0,18,116	0/0:36,0:36:54.89:0,55,375	1/1:14,0:13:29.51:195,30,0	1/1:23,0:23:59.07:405,59,0	1/1:17,0:17:43.79:277,44,0	0/0:15,0:15:16.80:0,17,105	0/0:16,0:16:28.58:0,29,147	0/0:8,0:8:14.82:0,15,110	1/1:24,0:23:64.71:403,65,0	1/1:15,0:15:43.71:268,44,0	1/1:22,0:22:64.35:410,64,0	1/1:18,1:19:44.30:305,44,0	1/1:22,0:22:53.13:365,53,0	1/1:19,1:20:44.15:298,44,0	1/1:10,1:11:26.57:186,27,0	0/0:5,0:5:11.06:0,11,53	0/0:16,0:16:23.84:0,24,87	0/0:14,0:14:11.70:0,12,98	0/0:13,0:13:18.28:0,18,107	1/1:23,0:23:55.86:349,56,0	1/1:12,1:12:32.44:221,32,0	0/0:9,0:9:21.05:0,21,134
chr10	93095971	.	C	CTTGG	17725.10	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-8.872;DP=510;FS=1.173;HRun=0;HaplotypeScore=86.2936;InbreedingCoeff=0.9939;MQ=73.05;MQ0=0;MQRankSum=-4.032;QD=58.69;ReadPosRankSum=1.410;VQSLOD=6.5479;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,29:36:80.40:1921,80,0	1/1:1,5:6:12.04:312,12,0	0/0:32,0:23:39.28:0,39,752	0/0:21,0:19:36.52:0,37,620	1/1:3,17:22:39.13:1013,39,0	0/0:16,0:16:42.14:0,42,751	0/0:15,0:15:42.13:0,42,721	0/0:17,0:17:39.12:0,39,671	1/1:2,23:25:69.24:1778,69,0	1/1:5,10:14:33.11:799,33,0	1/1:6,14:21:51.08:1153,51,0	0/0:13,0:13:31.73:0,32,635	0/0:13,0:13:36.11:0,36,617	0/0:13,0:13:39.13:0,39,694	1/1:2,18:21:60.19:1455,60,0	1/1:0,20:21:57.20:1476,57,0	1/1:6,24:31:60.10:1470,60,0	1/1:3,21:24:57.16:1303,57,0	1/1:3,14:18:45.14:1088,45,0	1/1:2,15:18:51.17:1260,51,0	1/1:0,6:7:18.06:468,18,0	0/0:8,0:8:21.02:0,21,342	0/0:16,0:16:39.13:0,39,677	0/0:16,0:16:45.15:0,45,802	0/0:17,0:17:45.15:0,45,783	1/1:5,15:21:57.11:1301,57,0	1/1:1,14:15:36.12:928,36,0	0/0:11,0:11:33.11:0,33,585
chr10	93096312	.	TAC	T	2007.34	PASS	AB=0.625;AC=19;AF=0.352;AN=54;BaseQRankSum=-0.906;DP=590;FS=8.655;HRun=0;HaplotypeScore=88.5323;InbreedingCoeff=0.7703;MQ=57.11;MQ0=15;MQRankSum=5.179;QD=10.04;ReadPosRankSum=2.334;VQSLOD=2.7929;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:29:28.41:140,28,0	0/0:10,0:10:14.73:0,15,204	./.	0/0:27,0:6:2.84:0,3,14	0/1:8,12:20:15.20:267,0,15	0/0:15,0:27:18.01:0,18,173	0/0:11,0:20:17.99:0,18,155	0/0:30,0:30:33.91:0,34,234	1/1:11,9:21:26.19:279,26,0	1/1:10,10:20:30.02:301,30,0	1/1:8,5:12:15.04:166,15,0	0/0:11,0:17:5.68:0,6,52	0/0:8,0:25:31.95:0,32,251	0/0:10,0:17:8.74:0,9,64	0/0:25,0:25:25:0,25,524	1/1:7,9:16:26.76:279,27,0	0/0:7,0:28:29.99:0,30,262	0/0:17,0:18:36.58:0,37,523	1/1:11,2:13:1.42:31,1,0	1/1:6,13:18:24.06:262,24,0	1/1:11,16:27:32.92:347,33,0	0/0:15,0:21:2.40:0,2,25	0/0:12,0:18:11.97:0,12,110	0/0:12,0:27:26.48:0,26,205	0/0:14,0:20:8.33:0,8,77	0/0:27,0:27:30.10:0,30,431	1/1:13,7:19:12.03:133,12,0	0/0:1,0:9:9:0,9,79
chr10	93098649	.	A	AACACACACACACACACACAC	8781.75	PASS	AB=1.000;AC=27;AF=0.500;AN=54;BaseQRankSum=5.597;DP=380;FS=7.591;HRun=0;HaplotypeScore=201.1949;InbreedingCoeff=0.7564;MQ=60.71;MQ0=1;MQRankSum=-8.762;QD=50.76;ReadPosRankSum=-1.692;VQSLOD=3.1530;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:0.47:0,0,1	1/1:6,1:7:3.01:280,3,0	0/0:24,0:15:30.05:0,30,1028	0/0:19,0:16:19.27:0,19,565	1/1:18,0:16:3.01:261,3,0	0/0:8,0:8:18.06:0,18,888	0/1:12,0:12:23.50:24,0,871	0/0:34,0:34:57.18:0,57,1864	1/1:10,0:10:6.02:350,6,0	1/1:9,0:9:15.05:1249,15,0	1/1:14,0:14:3.01:94,3,0	0/0:20,0:20:60.21:0,60,2800	0/0:13,0:13:33.11:0,33,1713	0/0:13,0:13:33.11:0,33,1580	1/1:10,4:13:24.08:2239,24,0	1/1:16,0:16:17.85:792,18,0	1/1:10,0:10:5.36:279,5,0	1/1:7,0:7:9.03:513,9,0	1/1:11,0:11:6.02:360,6,0	1/1:15,0:14:15.04:546,15,0	./.	0/0:12,0:12:21.07:0,21,922	0/0:19,0:19:36.12:0,36,1766	0/0:8,0:8:24.08:0,24,1200	0/0:18,0:18:27.09:0,27,1441	1/1:14,0:14:15.04:901,15,0	1/1:16,0:16:15.03:895,15,0	0/0:6,0:6:15.05:0,15,806
chr10	93098820	.	A	AG	3192.87	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=13.350;DP=485;FS=8.539;HRun=1;HaplotypeScore=95.8719;InbreedingCoeff=0.5661;MQ=73.62;MQ0=0;MQRankSum=-1.458;QD=11.53;ReadPosRankSum=4.250;VQSLOD=1.7255;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:5.09:99,0,5	1/1:0,7:7:18.06:269,18,0	0/0:12,0:12:30.04:0,30,369	0/0:6,0:6:14.97:0,15,189	0/1:32,0:32:30.34:167,0,30	0/0:18,0:18:54.17:0,54,687	0/0:9,0:9:27.07:0,27,324	0/0:30,0:30:87.25:0,87,1071	1/1:22,0:22:34.56:222,35,0	0/1:18,0:18:55.62:56,0,125	0/1:23,0:23:77.57:109,0,78	0/0:16,0:16:48.14:0,48,599	0/0:24,0:24:69.21:0,69,877	0/0:21,0:21:63.18:0,63,784	1/1:3,17:20:54.16:755,54,0	1/1:23,0:23:22.18:195,22,0	1/1:0,15:15:45.08:623,45,0	1/1:0,6:6:18.06:269,18,0	0/1:20,0:20:48.45:91,0,48	1/1:25,0:25:31.56:189,32,0	1/1:5,0:5:13.61:65,14,0	0/0:15,0:15:45.15:0,45,582	0/0:14,0:14:42.11:0,42,515	0/0:8,0:8:24.08:0,24,311	0/0:19,0:19:54.17:0,54,689	0/1:25,0:25:80.98:103,0,81	1/1:22,0:22:10.73:190,11,0	0/0:16,0:16:48.16:0,48,622
chr10	93098821	.	G	GA	7369.07	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=9.008;DP=494;FS=12.090;HRun=7;HaplotypeScore=85.0182;InbreedingCoeff=0.9902;MQ=73.21;MQ0=0;MQRankSum=-3.453;QD=26.13;ReadPosRankSum=1.221;VQSLOD=4.6147;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:15:36.11:435,36,0	1/1:7,0:7:17.69:110,18,0	0/0:12,0:12:33.04:0,33,314	0/0:6,0:6:11.98:0,12,107	1/1:5,27:32:66.20:797,66,0	0/0:19,0:19:51.08:0,51,492	0/0:9,0:9:21.03:0,21,203	0/0:32,0:32:72.10:0,72,691	1/1:1,21:22:63.19:758,63,0	1/1:6,12:18:36.11:435,36,0	1/1:5,18:23:48.11:563,48,0	0/0:16,0:16:45.06:0,45,429	0/0:25,0:25:69.09:0,69,660	0/0:21,0:21:57.09:0,57,550	1/1:19,0:19:46.93:320,47,0	1/1:5,18:23:60.16:701,60,0	1/1:16,0:16:37.49:267,37,0	1/1:6,0:6:17.81:125,18,0	1/1:7,13:20:48.14:571,48,0	1/1:2,24:26:61.07:720,61,0	1/1:1,5:6:15.05:181,15,0	0/0:15,0:15:45.06:0,45,429	0/0:15,0:15:36.05:0,36,348	0/0:8,0:8:24.04:0,24,232	0/0:18,0:18:51.08:0,51,493	1/1:8,17:25:57.16:669,57,0	1/1:6,18:24:60.18:716,60,0	0/0:16,0:16:48.08:0,48,464
chr10	93098899	.	GCAA	G	12368.68	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=18.101;DP=606;FS=16.530;HRun=0;HaplotypeScore=105.1661;InbreedingCoeff=0.9946;MQ=87.97;MQ0=0;MQRankSum=-7.182;QD=40.96;ReadPosRankSum=2.994;VQSLOD=5.3735;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:39.05:570,39,0	1/1:0,6:6:18.06:288,18,0	0/0:22,0:22:56.98:0,57,1099	0/0:24,0:24:66.16:0,66,1229	1/1:2,25:27:66.14:1010,66,0	0/0:29,0:29:87.30:0,87,1903	0/0:16,0:16:48.16:0,48,1044	0/0:40,0:40:99:0,105,2286	1/1:3,23:26:63.21:1000,63,0	1/1:1,19:20:60.20:952,60,0	1/1:2,13:15:42.14:672,42,0	0/0:34,0:34:99:0,102,2220	0/0:32,0:32:96.30:0,96,2000	0/0:22,0:22:66.23:0,66,1402	1/1:4,26:30:81.27:1264,81,0	1/1:3,28:31:78.25:1217,78,0	1/1:2,15:17:39.13:618,39,0	1/1:2,3:5:12.04:190,12,0	1/1:3,17:20:48.16:746,48,0	1/1:4,21:25:69.23:1089,69,0	1/1:1,21:22:51.11:789,51,0	0/0:23,0:23:66.21:0,66,1361	0/0:18,0:18:51.16:0,51,1065	0/0:15,0:15:45.15:0,45,952	0/0:18,0:18:54.19:0,54,1153	1/1:2,18:20:57.19:915,57,0	1/1:1,23:24:66.22:1049,66,0	0/0:11,0:10:30.10:0,30,662
chr10	93099512	.	C	CACTGCCCCCCCA	29651.61	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-4.131;DP=517;FS=15.260;HRun=0;HaplotypeScore=150.1020;InbreedingCoeff=0.9925;MQ=68.67;MQ0=0;MQRankSum=-14.800;QD=107.43;ReadPosRankSum=0.598;VQSLOD=4.0855;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:25:48.16:2255,48,0	1/1:1,0:9:12.04:465,12,0	0/0:13,0:13:28.73:0,29,794	0/0:16,0:15:34.05:0,34,919	1/1:3,11:22:39.05:2039,39,0	0/0:22,0:22:66.19:0,66,2362	0/0:18,0:18:48.15:0,48,1655	0/0:25,0:25:69.23:0,69,2417	1/1:5,7:14:36.12:2107,36,0	1/1:2,11:16:45.14:2488,45,0	1/1:2,6:10:21.07:1285,21,0	0/0:21,0:21:60.17:0,60,1963	0/0:19,0:19:57.16:0,57,1998	0/0:17,0:17:48.16:0,48,1824	1/1:5,0:18:39.13:1876,39,0	1/1:2,11:16:33.11:2046,33,0	1/1:6,0:20:45.15:2046,45,0	1/1:2,0:16:18.06:865,18,0	1/1:7,10:24:72.15:3126,72,0	1/1:2,9:18:39.05:1940,39,0	1/1:6,0:12:18.06:831,18,0	0/0:22,0:22:63.19:0,63,2132	0/0:23,0:23:66.23:0,66,2418	0/0:15,0:15:45.14:0,45,1496	0/0:22,0:22:66.22:0,66,2335	1/1:6,13:29:71.93:3532,72,0	1/1:5,10:27:45.15:2752,45,0	0/0:8,0:8:24.08:0,24,925
chr10	93099666	.	GT	G	1548.61	PASS	AB=0.922;AC=21;AF=0.375;AN=56;BaseQRankSum=-0.209;DP=348;FS=1.015;HRun=1;HaplotypeScore=59.2738;InbreedingCoeff=0.4748;MQ=73.77;MQ0=0;MQRankSum=-1.406;QD=12.19;ReadPosRankSum=0.580;VQSLOD=2.0850;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:17.26:111,17,0	1/1:0,4:4:6.02:84,6,0	0/0:22,0:18:40.96:0,41,481	0/0:12,0:9:21.03:0,21,234	0/1:4,1:5:3.96:57,0,4	0/0:15,0:15:44.83:0,45,528	0/0:23,0:23:66.07:0,66,825	0/0:22,0:22:60.09:0,60,748	0/1:9,0:9:29.50:47,0,29	1/1:1,1:2:3:27,3,0	0/1:5,1:6:7.29:49,0,7	0/0:20,0:20:58.93:0,59,705	0/0:11,0:11:17.81:0,18,355	0/0:16,0:16:45.14:0,45,622	1/1:0,18:18:45.15:616,45,0	0/1:7,0:7:12.35:50,0,12	1/1:0,12:11:27.09:366,27,0	1/1:2,2:4:11.38:106,11,0	1/1:2,0:2:5.89:39,6,0	0/1:7,1:8:12.66:74,0,13	0/1:9,0:9:1.30:81,0,1	0/0:10,0:10:30.05:0,30,360	0/0:16,0:16:47:0,47,528	0/0:18,0:18:48.08:0,48,592	0/0:14,0:13:33.06:0,33,408	0/1:6,1:7:20.04:30,0,20	0/0:11,0:11:11.92:0,12,71	0/0:11,0:11:33.10:0,33,453
chr10	93099667	.	TG	T	1056.82	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=3.692;DP=354;FS=16.947;HRun=8;HaplotypeScore=62.5030;InbreedingCoeff=0.5766;MQ=73.61;MQ0=0;MQRankSum=0.628;QD=11.74;ReadPosRankSum=3.107;VQSLOD=1.2212;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:33:81.12:780,81,0	1/1:4,0:4:5.75:30,6,0	0/0:22,0:18:32.93:0,33,338	0/0:12,0:9:18.05:0,18,207	0/1:5,0:5:6.84:7,0,60	0/0:16,0:16:45.12:0,45,527	0/0:24,0:24:51.14:0,51,604	0/0:23,0:23:57.64:0,58,676	0/0:10,0:10:19.41:0,19,212	./.	0/1:6,0:6:2.91:3,0,95	0/0:21,0:21:48.13:0,48,561	0/0:10,1:11:1.14:0,1,286	0/0:16,0:16:48.12:0,48,558	1/1:18,0:18:43.01:245,43,0	0/0:8,0:8:10.73:0,11,99	1/1:13,0:12:4.87:120,5,0	1/1:4,0:4:2.26:23,2,0	0/0:2,0:2:3:0,3,26	0/1:7,0:7:0.83:1,0,121	0/0:8,0:8:9.50:0,9,108	0/0:11,0:11:24.07:0,24,287	0/0:17,0:17:36.11:0,36,427	0/0:17,0:17:36.10:0,36,423	0/0:14,0:13:39.09:0,39,439	0/0:8,0:8:6.18:0,6,183	0/0:11,0:11:30.09:0,30,357	0/0:11,0:11:30.09:0,30,362
chr10	93100175	.	C	CAT	802.54	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.522;DP=628;FS=0.000;HRun=0;HaplotypeScore=92.7369;InbreedingCoeff=0.9428;MQ=71.05;MQ0=0;MQRankSum=-2.070;QD=27.67;ReadPosRankSum=-0.464;VQSLOD=4.0785;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:29:54.18:897,54,0	0/0:11,0:11:33.11:0,33,416	0/0:13,0:13:26.56:0,27,295	0/0:14,0:14:15.27:0,15,315	0/0:28,0:28:75.23:0,75,932	0/0:23,0:23:57.18:0,57,719	0/0:18,0:18:51.16:0,51,643	0/0:29,0:29:60.18:0,60,746	0/0:28,0:28:72.21:0,72,893	0/0:34,0:34:84.27:0,84,1060	0/0:22,0:22:57.17:0,57,704	0/0:25,0:25:69.21:0,69,858	0/0:25,0:25:66.19:0,66,818	0/0:17,0:18:44.98:0,45,544	0/0:30,0:30:81.26:0,81,1022	0/0:22,0:22:51.16:0,51,643	0/0:21,0:21:48.12:0,48,588	0/0:32,0:32:75.20:0,75,915	0/0:18,0:18:45.13:0,45,556	0/0:22,0:22:54.17:0,54,681	0/0:22,1:23:10.39:0,10,670	0/0:19,0:19:48.15:0,48,606	0/0:18,0:18:51.15:0,51,629	0/0:20,0:20:51.16:0,51,641	0/0:16,0:16:36.11:0,36,454	0/0:29,0:29:84.27:0,84,1060	0/0:31,0:31:90.26:0,90,1108	0/0:10,0:10:30.07:0,30,351
chr10	93100863	.	TA	T	13277.68	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=15.123;DP=683;FS=1.290;HRun=5;HaplotypeScore=66.7472;InbreedingCoeff=0.9994;MQ=71.02;MQ0=0;MQRankSum=-1.824;QD=31.10;ReadPosRankSum=2.884;VQSLOD=5.5814;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,39:43:99:1327,117,0	1/1:1,10:11:30.08:340,30,0	0/0:18,0:18:48.16:0,48,646	0/0:11,0:11:22.40:0,22,266	1/1:5,29:34:90.24:1011,90,0	0/0:26,0:26:75.25:0,75,1026	0/0:27,0:27:81.25:0,81,1085	0/0:21,0:21:36.44:0,36,665	1/1:0,22:22:66.16:736,66,0	1/1:2,39:41:99:1248,111,0	1/1:2,18:20:54.14:603,54,0	0/0:12,0:12:33.11:0,33,451	0/0:28,0:28:72.24:0,72,984	0/0:17,0:17:51.17:0,51,698	1/1:1,41:42:99:1259,111,0	1/1:0,27:27:78.22:885,78,0	1/1:2,34:36:96.27:1089,96,0	1/1:2,15:17:39.11:442,39,0	1/1:3,25:28:75.20:841,75,0	1/1:0,29:29:84.24:953,84,0	1/1:0,22:22:66.19:749,66,0	0/0:19,0:19:57.17:0,57,760	0/0:25,0:25:69.22:0,69,929	0/0:12,0:12:36.10:0,36,475	0/0:24,0:24:72.23:0,72,971	1/1:2,28:30:84.24:953,84,0	1/1:1,24:25:75.20:840,75,0	0/0:16,0:16:48.16:0,48,656
chr10	93100951	.	A	AT	10325.80	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-13.820;DP=671;FS=5.260;HRun=9;HaplotypeScore=66.8070;InbreedingCoeff=0.9988;MQ=78.28;MQ0=0;MQRankSum=-1.733;QD=27.54;ReadPosRankSum=2.599;VQSLOD=5.2819;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,17:24:56.88:584,57,0	1/1:8,7:16:23.90:247,24,0	0/0:24,0:20:39.24:0,39,314	0/0:16,0:15:23.39:0,23,176	1/1:0,34:34:99:1067,99,0	0/0:31,0:31:77.98:0,78,677	0/0:16,0:16:29.95:0,30,257	0/0:31,0:31:65.93:0,66,570	1/1:4,9:13:33.09:365,33,0	1/1:8,22:30:78.19:846,78,0	1/1:2,29:32:87.22:954,87,0	0/0:20,0:20:53.97:0,54,469	0/0:22,0:22:47.97:0,48,417	0/0:15,0:15:32.96:0,33,330	1/1:7,18:25:60.15:652,60,0	1/1:5,23:28:81.18:883,81,0	1/1:11,22:33:78.19:851,78,0	1/1:3,9:12:30.06:320,30,0	1/1:7,15:23:35.08:551,35,0	1/1:6,19:25:69.15:738,69,0	1/1:2,7:9:24.05:257,24,0	0/0:32,0:32:74.96:0,75,646	0/0:28,1:29:41.77:0,42,588	0/0:15,0:15:41.97:0,42,361	0/0:27,0:27:77.98:0,78,677	1/1:4,33:38:99:1201,111,0	1/1:13,20:33:75.17:811,75,0	0/0:18,0:18:44.98:0,45,391
chr10	93101397	.	G	GA	9901.39	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=10.312;DP=688;FS=7.230;HRun=3;HaplotypeScore=108.7585;InbreedingCoeff=0.9981;MQ=75.15;MQ0=0;MQRankSum=-0.671;QD=32.89;ReadPosRankSum=0.189;VQSLOD=4.1648;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,42:46:99:1447,105,0	0/0:8,0:8:20.32:0,20,121	0/0:18,0:17:19.66:0,20,371	0/0:31,0:30:64.71:0,65,707	1/1:6,29:35:98.06:1211,98,0	0/0:23,0:23:66.20:0,66,792	0/0:21,0:21:57.17:0,57,683	0/0:36,0:36:90.24:0,90,1043	1/1:0,13:13:33.11:422,33,0	1/1:2,34:36:99:1248,102,0	1/1:3,28:31:84.15:1018,84,0	0/0:23,0:23:60.17:0,60,708	0/0:23,0:23:54.17:0,54,648	0/0:22,0:22:57.17:0,57,683	0/0:35,0:35:76.03:0,76,382	1/1:1,20:21:55.06:693,55,0	0/0:22,0:22:60.46:0,60,323	0/0:13,0:13:24.76:0,25,140	1/1:6,19:25:66.20:835,66,0	1/1:1,30:31:75.10:1044,75,0	1/1:2,10:12:27.09:346,27,0	0/0:27,0:27:75.21:0,75,887	0/0:22,0:22:60.18:0,60,719	0/0:29,0:29:84.26:0,84,1007	0/0:19,0:19:57.17:0,57,684	1/1:3,15:18:45.14:578,45,0	1/1:5,28:33:85.09:1058,85,0	0/0:15,0:15:39.12:0,39,468
chr10	93102276	.	G	GTATTTATTTATTTATTTATTTATTTATT	16874.64	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=6.198;DP=455;FS=1.021;HRun=0;HaplotypeScore=273.3217;InbreedingCoeff=0.9383;MQ=64.52;MQ0=0;MQRankSum=-10.980;QD=78.85;ReadPosRankSum=0.158;VQSLOD=3.9143;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:19:9.03:747,9,0	1/1:4,0:4:12.04:996,12,0	0/0:11,0:11:15.05:0,15,497	0/0:6,0:6:8.06:0,8,274	1/1:14,0:14:21.03:911,21,0	0/0:24,0:24:57.20:0,57,3484	0/0:11,0:11:21.07:0,21,950	0/0:30,0:30:57.19:0,57,2517	1/1:10,0:14:24.08:1784,24,0	1/1:16,0:16:24.03:1076,24,0	1/1:15,0:15:27.02:1211,27,0	0/0:28,0:28:60.18:0,60,3471	0/0:19,0:19:42.14:0,42,2386	0/0:23,0:23:60.19:0,60,3378	1/1:14,0:14:21.07:1988,21,0	1/1:7,0:11:12.01:841,12,0	1/1:11,0:22:21.07:1636,21,0	1/1:6,1:13:18.04:1678,18,0	1/1:14,0:14:24.03:1374,24,0	1/1:9,0:16:15.02:596,15,0	1/1:6,0:10:6.02:489,6,0	0/0:20,0:20:48.16:0,48,2723	0/0:17,0:17:27.09:0,27,1532	0/0:21,0:21:48.12:0,48,2638	0/0:23,0:23:42.11:0,42,2113	1/1:3,0:8:9.03:444,9,0	1/1:7,0:23:12.04:1104,12,0	0/0:8,0:8:24.07:0,24,1399
chr10	93102573	.	C	CA	14487.63	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-15.730;DP=693;FS=1.981;HRun=4;HaplotypeScore=65.2118;InbreedingCoeff=0.9986;MQ=90.22;MQ0=0;MQRankSum=-4.434;QD=39.58;ReadPosRankSum=4.193;VQSLOD=3.9405;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,53:53:99:2290,154,0	1/1:0,7:7:18.06:270,18,0	0/0:34,0:33:87.26:0,87,1106	0/0:30,0:30:81.21:0,81,1004	1/1:1,14:15:39.05:526,39,0	0/0:19,0:19:57.19:0,57,740	0/0:30,0:30:87.27:0,87,1115	0/0:34,0:34:93.30:0,93,1207	1/1:1,18:19:45.13:674,45,0	1/1:1,22:23:66.22:979,66,0	1/1:0,9:9:24.08:349,24,0	0/0:20,0:20:60.18:0,60,765	0/0:23,0:23:69.18:0,69,858	0/0:31,0:31:90.25:0,90,1125	1/1:1,23:24:66.22:989,66,0	1/1:1,43:44:99:1799,120,0	1/1:1,32:32:84.28:1246,84,0	1/1:2,17:19:44.36:637,44,0	1/1:0,18:18:54.15:784,54,0	1/1:1,21:22:57.15:801,57,0	1/1:0,31:31:81.27:1214,81,0	0/0:23,0:23:66.21:0,66,854	0/0:17,0:17:51.15:0,51,646	0/0:36,0:36:99:0,105,1344	0/0:17,0:17:51.13:0,51,632	1/1:0,22:22:66.22:989,66,0	1/1:0,26:24:63.21:941,63,0	0/0:13,0:13:39.13:0,39,506
chr10	93104445	.	C	CT	3536.68	PASS	AB=0.819;AC=21;AF=0.375;AN=56;BaseQRankSum=-6.072;DP=438;FS=0.425;HRun=10;HaplotypeScore=56.3421;InbreedingCoeff=0.7726;MQ=71.45;MQ0=0;MQRankSum=1.800;QD=18.42;ReadPosRankSum=-0.489;VQSLOD=3.9517;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:55.72:0,56,436	0/0:5,0:5:14.98:0,15,123	0/1:10,0:7:0.83:11,0,1	0/0:12,0:14:0.90:0,1,124	1/1:1,10:11:27.03:276,27,0	0/0:12,1:13:0.95:0,1,214	0/1:8,1:9:11.02:11,0,127	0/0:31,0:32:55.91:0,56,447	1/1:1,11:12:33.08:355,33,0	1/1:4,13:17:36.07:375,36,0	1/1:5,14:19:38.98:379,39,0	0/0:16,0:16:41.94:0,42,344	0/0:13,0:15:31.03:0,31,233	0/0:3,0:3:8.97:0,9,71	0/0:13,0:14:31.99:0,32,253	1/1:7,13:23:26.02:434,26,0	0/0:27,0:27:62.89:0,63,523	0/0:19,0:20:40.90:0,41,330	1/1:5,16:20:42.08:438,42,0	0/1:2,6:10:0.93:165,0,1	1/1:1,12:13:21.05:224,21,0	0/0:10,0:10:23.94:0,24,193	0/0:11,0:11:23.94:0,24,197	0/0:14,0:14:32.96:0,33,271	0/0:12,0:12:23.93:0,24,197	1/1:7,14:21:39.07:400,39,0	1/1:8,18:26:26.32:469,26,0	0/0:11,0:11:26.96:0,27,225
chr10	93104593	.	G	GTATTTT	4518.20	PASS	AB=0.594;AC=7;AF=0.125;AN=56;BaseQRankSum=-1.739;DP=497;FS=1.189;HRun=0;HaplotypeScore=98.4398;InbreedingCoeff=0.8429;MQ=61.24;MQ0=0;MQRankSum=-10.952;QD=59.45;ReadPosRankSum=-1.942;VQSLOD=4.6793;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.24:0,78,1677	1/1:4,4:9:21.03:528,21,0	0/0:13,0:13:30.09:0,30,636	0/0:6,0:6:9:0,9,193	0/0:26,0:26:60.18:0,60,1278	0/0:12,0:12:36.12:0,36,795	0/0:19,0:19:57.18:0,57,1198	0/0:29,0:29:78.13:0,78,1521	0/0:15,0:15:42.13:0,42,851	0/0:20,0:20:51.17:0,51,1088	0/0:15,0:15:36.12:0,36,795	0/0:25,0:25:75.26:0,75,1637	0/0:9,0:9:24.08:0,24,513	0/0:20,0:20:57.18:0,57,1198	1/1:5,20:26:66.23:1861,66,0	0/0:21,0:21:63.22:0,63,1389	0/1:6,12:19:7.94:857,0,8	1/1:10,11:21:39.13:1273,39,0	0/0:14,0:14:36.09:0,36,731	0/0:18,0:18:48.15:0,48,1015	0/0:9,0:9:24.08:0,24,530	0/0:19,0:19:54.19:0,54,1176	0/0:12,0:12:30.09:0,30,621	0/0:18,0:18:48.10:0,48,903	0/0:21,0:21:51.18:0,51,1125	0/0:14,0:14:42.14:0,42,889	0/0:22,0:22:57.20:0,57,1221	0/0:15,0:15:39.13:0,39,861
chr10	93104872	.	A	AT	1703.64	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.494;DP=684;FS=2.011;HRun=1;HaplotypeScore=68.2602;InbreedingCoeff=0.9981;MQ=76.35;MQ0=0;MQRankSum=-2.948;QD=41.55;ReadPosRankSum=0.954;VQSLOD=4.2596;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.21:0,66,856	0/0:9,0:9:27.09:0,27,351	0/0:17,0:17:51.07:0,51,618	0/0:17,0:17:27.96:0,28,448	0/0:29,0:29:81.25:0,81,1035	0/0:28,0:28:81.26:0,81,1052	0/0:24,0:24:72.20:0,72,904	0/0:32,0:32:90.29:0,90,1168	0/0:29,0:29:84.26:0,84,1076	0/0:27,0:27:78.23:0,78,979	0/0:22,0:22:57.17:0,57,726	0/0:32,0:32:96.31:0,96,1245	0/0:18,0:18:54.18:0,54,700	0/0:27,0:27:81.26:0,81,1043	0/0:30,0:30:84.26:0,84,1076	0/0:27,0:27:81.25:0,81,1037	0/0:21,0:21:60.17:0,60,763	0/0:17,0:17:48.09:0,48,588	0/0:23,0:23:66.20:0,66,833	0/0:29,0:29:87.28:0,87,1128	0/0:20,0:20:60.20:0,60,779	0/0:30,0:30:90.28:0,90,1154	0/0:24,0:24:69.22:0,69,896	0/0:14,0:14:42.14:0,42,545	0/0:20,0:20:60.20:0,60,779	0/0:29,0:29:87.28:0,87,1129	0/0:25,0:24:72.23:0,72,934	1/1:0,41:41:99:1799,120,0
chr10	93105588	.	GA	G	357.49	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=2.975;DP=641;FS=1.819;HRun=2;HaplotypeScore=93.3105;InbreedingCoeff=0.6493;MQ=69.25;MQ0=26;MQRankSum=-2.264;QD=5.86;ReadPosRankSum=-0.425;VQSLOD=0.4983;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:21.67:0,22,245	1/1:6,1:6:7.87:103,8,0	0/0:51,0:20:46.85:0,47,530	0/0:71,0:25:62.37:0,62,782	0/0:21,0:20:36.56:0,37,218	0/0:18,0:18:29.98:0,30,181	0/0:24,0:24:2.50:0,2,9	0/0:30,0:30:53.53:0,54,389	0/0:24,0:24:10.40:0,10,67	0/0:18,0:18:41.33:0,41,208	0/0:20,0:20:37.46:0,37,224	0/0:31,0:31:10.83:0,11,53	0/0:21,0:21:43.45:0,43,281	0/1:15,0:14:4.31:4,0,28	0/0:26,0:26:9.97:0,10,32	0/0:24,0:23:7.77:0,8,30	1/1:19,0:19:4.52:14,5,0	1/1:16,4:20:46.41:362,46,0	0/0:9,0:9:26.49:0,26,182	0/0:10,0:10:25.67:0,26,163	0/0:27,0:27:44.68:0,45,236	0/0:9,0:9:13.71:0,14,67	0/0:17,0:16:28.84:0,29,153	0/0:32,0:32:7.31:0,7,38	0/0:12,0:12:28.69:0,29,150	0/0:24,0:24:49.89:0,50,254	0/0:29,0:29:8.33:0,8,43	0/0:4,0:3:8.62:0,9,44
chr10	93105589	.	A	AGG	6755.69	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.181;DP=611;FS=3.434;HRun=1;HaplotypeScore=74.8051;InbreedingCoeff=0.5854;MQ=71.27;MQ0=25;MQRankSum=-2.293;QD=13.87;ReadPosRankSum=2.217;VQSLOD=2.1609;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:26:48.18:407,48,0	1/1:3,0:5:2.83:53,3,0	0/0:53,0:21:19.87:0,20,353	0/0:71,0:25:56.08:0,56,546	1/1:20,0:19:41.72:379,42,0	1/1:16,0:16:36.12:304,36,0	1/1:0,23:23:2.90:60,3,0	1/1:31,0:31:86.25:697,86,0	1/1:0,0:22:10.43:94,10,0	1/1:1,15:16:44.52:537,45,0	1/1:19,0:19:39.73:349,40,0	1/1:1,22:25:3.90:167,4,0	1/1:16,0:17:40.79:322,41,0	1/1:2,12:14:2.84:123,3,0	1/1:1,0:26:11.77:103,12,0	1/1:0,0:22:8.96:123,9,0	1/1:3,0:15:7.25:32,7,0	1/1:16,0:20:10.48:228,10,0	1/1:1,0:12:32.88:281,33,0	1/1:10,0:10:27.61:218,28,0	1/1:28,0:28:62.97:611,63,0	1/1:6,2:8:15.01:196,15,0	1/1:15,0:14:29.97:270,30,0	1/1:2,26:31:5.14:120,5,0	1/1:11,0:11:29.94:248,30,0	1/1:0,17:21:59.72:628,60,0	1/1:0,26:29:8.92:130,9,0	1/1:4,0:3:8.99:75,9,0
chr10	93106385	.	G	GA	2444.78	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=5.004;DP=604;FS=8.283;HRun=10;HaplotypeScore=97.8945;InbreedingCoeff=0.9103;MQ=54.72;MQ0=6;MQRankSum=-2.212;QD=17.22;ReadPosRankSum=0.053;VQSLOD=3.3444;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,43:52:87.16:901,87,0	1/1:5,3:8:14.99:140,15,0	0/1:9,0:3:2.65:3,0,19	0/0:8,0:7:14.49:0,14,105	0/0:22,0:22:35.89:0,36,295	0/0:16,0:19:45.06:0,45,338	0/0:34,0:34:85.92:0,86,695	0/0:23,0:24:55.95:0,56,449	0/0:19,0:19:32.87:0,33,268	0/0:27,1:29:23.93:0,24,386	0/0:10,0:12:16.95:0,17,125	0/0:22,0:22:29.86:0,30,246	0/0:30,0:30:77.86:0,78,634	0/0:24,0:24:53.89:0,54,443	1/1:10,16:27:59.92:587,60,0	0/0:24,0:25:46.95:0,47,375	1/1:2,23:25:45.07:466,45,0	1/1:6,15:20:51.07:523,51,0	0/0:17,0:15:20.93:0,21,172	0/0:18,0:17:32.79:0,33,260	0/0:23,0:20:41.86:0,42,339	0/0:19,0:19:41.91:0,42,344	0/0:17,0:17:26.91:0,27,221	0/0:32,0:32:58.22:0,58,596	0/0:23,0:23:47.88:0,48,394	0/0:16,0:17:37.92:0,38,293	0/0:13,0:13:14.87:0,15,123	0/0:11,0:11:26.97:0,27,221
chr10	93106411	.	C	CA	4559.57	PASS	AB=0.980;AC=22;AF=0.393;AN=56;BaseQRankSum=9.515;DP=615;FS=4.175;HRun=2;HaplotypeScore=99.3091;InbreedingCoeff=0.8446;MQ=63.84;MQ0=4;MQRankSum=0.869;QD=16.76;ReadPosRankSum=-1.132;VQSLOD=4.6393;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:47,2:49:17.93:18,0,253	0/0:7,0:7:4.63:0,5,15	0/0:28,0:19:33.24:0,33,512	0/0:14,0:12:33.10:0,33,387	1/1:6,14:19:39.07:429,39,0	0/0:17,0:17:48.15:0,48,595	0/0:39,0:39:99:0,111,1374	0/0:25,0:25:60.18:0,60,732	1/1:9,12:21:49.02:541,49,0	1/1:7,23:30:50.75:687,51,0	1/1:4,10:14:26.95:289,27,0	0/0:23,0:23:66.21:0,66,817	0/0:29,0:29:87.27:0,87,1076	0/0:22,0:22:66.21:0,66,817	0/0:23,0:24:8.55:0,9,31	1/1:8,19:28:11.74:549,12,0	0/0:24,0:24:26.13:0,26,130	0/1:18,0:17:2.30:2,0,28	1/1:1,15:16:42.55:455,43,0	1/1:2,8:11:23.77:253,24,0	1/1:7,15:20:47.62:526,48,0	0/0:17,0:17:51.16:0,51,631	0/0:14,0:14:42.13:0,42,519	0/0:27,0:27:75.24:0,75,928	0/0:18,0:18:54.17:0,54,669	1/1:3,19:22:33.59:493,34,0	1/1:3,18:21:17.98:319,18,0	0/0:15,0:15:45.14:0,45,552
chr10	93106413	.	AC	A	4699.84	PASS	AB=0.963;AC=28;AF=0.500;AN=56;BaseQRankSum=13.925;DP=610;FS=5.399;HRun=1;HaplotypeScore=97.7852;InbreedingCoeff=0.8580;MQ=64.06;MQ0=4;MQRankSum=2.131;QD=14.51;ReadPosRankSum=-1.773;VQSLOD=3.7379;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:46,4:50:40.03:235,0,40	1/1:7,0:7:21.01:249,21,0	0/0:26,0:19:51.09:0,51,609	0/0:14,0:12:32.89:0,33,366	1/1:19,1:19:44.07:277,44,0	0/0:16,0:16:48.16:0,48,652	0/0:39,0:39:99:0,114,1489	0/0:23,0:23:58.95:0,59,731	1/1:19,1:20:48.26:276,48,0	1/1:30,0:30:73.61:464,74,0	1/1:12,1:13:31.85:201,32,0	0/0:22,0:22:66.20:0,66,877	0/0:29,0:29:87.22:0,87,1136	0/0:25,0:25:75.12:0,75,930	1/1:23,0:23:63.14:764,63,0	1/1:28,0:28:40.62:364,41,0	0/1:24,0:24:15.96:140,0,16	1/1:18,0:17:39.06:451,39,0	1/1:15,0:15:44.45:304,44,0	1/1:11,0:11:26.87:160,27,0	1/1:21,1:20:50.87:310,51,0	0/0:17,0:17:51.16:0,51,684	0/0:14,0:14:42.14:0,42,565	0/0:28,0:28:78.13:0,78,996	0/0:18,0:18:54.18:0,54,750	1/1:22,0:22:31.87:312,32,0	1/1:20,1:21:33.79:191,34,0	0/0:15,0:15:45.07:0,45,548
chr10	93107936	.	T	TCA	731.15	PASS	AB=0.933;AC=24;AF=0.480;AN=50;BaseQRankSum=-4.092;DP=546;FS=4.665;HRun=0;HaplotypeScore=80.8504;InbreedingCoeff=0.3783;MQ=68.06;MQ0=11;MQRankSum=1.423;QD=2.44;ReadPosRankSum=-0.468;VQSLOD=0.9092;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,11:29:8.85:131,9,0	./.	./.	./.	1/1:27,0:26:8.67:108,9,0	0/0:24,0:24:10.18:0,10,43	0/0:14,0:14:5.55:0,6,28	1/1:15,0:15:2.92:17,3,0	1/1:13,3:15:6.02:88,6,0	1/1:11,4:15:5.99:65,6,0	0/1:15,4:20:24.90:38,0,25	0/0:19,0:19:15.50:0,16,160	0/0:11,0:15:17.54:0,18,137	0/0:20,0:20:20.64:0,21,201	0/0:20,0:19:24.06:0,24,255	0/1:14,3:18:19.86:120,0,20	0/0:11,0:16:5.68:0,6,28	0/0:15,0:14:15.04:0,15,159	0/1:12,0:11:3.15:10,0,3	0/1:11,0:11:15.28:57,0,15	1/1:28,0:26:8.97:70,9,0	0/1:7,0:6:0.01:0,0,0	0/0:14,0:13:3:0,3,32	0/1:43,1:45:7.84:8,0,314	0/0:13,0:13:3:0,3,32	1/1:21,0:21:9.42:70,9,0	1/1:10,6:19:6.02:88,6,0	1/1:9,0:15:3.47:27,3,0
chr10	93108088	.	GAAGATGGGT	G	17831.84	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=17.865;DP=555;FS=4.770;HRun=0;HaplotypeScore=182.5381;InbreedingCoeff=0.9830;MQ=69.86;MQ0=0;MQRankSum=-16.668;QD=71.61;ReadPosRankSum=4.094;VQSLOD=4.5661;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,5294	1/1:0,6:6:15.05:454,15,0	0/0:24,0:23:63.22:0,63,2866	0/0:12,0:12:29.89:0,30,1288	1/1:3,17:20:45.15:1359,45,0	0/0:27,0:27:81.28:0,81,3789	0/0:11,0:11:30.10:0,30,1355	0/0:29,0:29:81.28:0,81,3529	1/1:1,11:12:30.10:909,30,0	1/1:1,22:23:66.23:1994,66,0	1/1:3,17:20:42.14:1271,42,0	0/0:28,0:28:72.25:0,72,3383	0/0:26,0:26:72.25:0,72,3447	0/0:20,0:20:60.21:0,60,2827	1/1:1,14:15:36.12:1091,36,0	1/1:2,20:22:48.16:1454,48,0	1/1:3,13:16:24.08:727,24,0	1/1:0,14:14:33.11:1000,33,0	1/1:3,21:24:63.20:1736,63,0	1/1:0,23:23:66.18:1928,66,0	1/1:1,7:8:6.02:182,6,0	0/0:12,0:12:36.12:0,36,1740	0/0:21,0:21:54.19:0,54,2571	0/0:14,0:14:42.14:0,42,1938	0/0:30,0:29:87.30:0,87,4153	1/1:1,21:22:63.22:1819,63,0	1/1:1,23:24:63.22:1908,63,0	0/0:13,0:13:39.13:0,39,1836
chr10	93111547	.	GT	G	4651.68	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=13.721;DP=659;FS=2.249;HRun=10;HaplotypeScore=146.8574;InbreedingCoeff=0.6890;MQ=62.79;MQ0=2;MQRankSum=-2.853;QD=13.03;ReadPosRankSum=3.255;VQSLOD=3.5059;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:22,11:33:59.97:456,60,0	0/1:3,0:5:6.24:6,0,19	0/0:27,1:21:12.24:0,12,325	0/0:19,0:13:23.93:0,24,243	1/1:17,9:26:70.74:502,71,0	0/0:17,0:17:45:0,45,469	0/0:20,0:20:48.11:0,48,521	0/0:44,0:44:67.07:0,67,762	1/1:22,5:27:64.79:452,65,0	1/1:18,14:33:82.33:575,82,0	1/1:14,3:17:0.92:183,1,0	0/0:34,0:34:94.12:0,94,1013	0/0:24,1:25:34.06:0,34,583	0/0:20,1:21:34.09:0,34,589	0/1:15,0:25:25.44:25,0,173	1/1:20,8:28:70.78:492,71,0	0/1:16,0:25:69.03:69,0,70	0/1:11,0:21:62.62:63,0,70	1/1:19,7:26:61.66:414,62,0	1/1:5,5:9:23.46:160,23,0	1/1:20,8:28:65.39:457,65,0	0/0:12,0:14:35.89:0,36,365	0/0:14,0:17:41.60:0,42,400	0/0:25,0:25:69.14:0,69,736	0/0:22,0:22:48.12:0,48,523	1/1:21,9:29:70.30:482,70,0	1/1:16,7:23:21.84:317,22,0	0/0:15,0:15:33.05:0,33,346
chr10	93111556	.	T	TG	5300.87	PASS	AB=0.810;AC=21;AF=0.375;AN=56;BaseQRankSum=15.257;DP=651;FS=1.345;HRun=0;HaplotypeScore=145.6175;InbreedingCoeff=0.3276;MQ=61.04;MQ0=2;MQRankSum=-5.373;QD=15.06;ReadPosRankSum=4.819;VQSLOD=6.3175;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,10:33:67.86:361,0,68	0/1:4,0:4:13.52:22,0,14	0/0:34,0:24:61.25:0,61,637	0/0:18,0:12:26.70:0,27,298	0/1:10,17:27:12.96:408,0,13	0/0:19,0:19:56.87:0,57,684	0/0:19,0:19:57.10:0,57,712	0/0:34,0:34:91.11:0,91,1089	1/1:13,15:28:32.07:615,32,0	1/1:19,12:31:9.42:611,9,0	1/1:5,10:15:27.21:341,27,0	0/0:35,0:35:97.16:0,97,1243	0/0:23,0:23:65.88:0,66,819	0/0:23,0:23:65.89:0,66,811	0/1:25,0:25:80.50:144,0,80	0/1:10,15:25:8.38:491,0,8	0/1:22,0:23:73.61:152,0,74	0/1:25,0:25:63.33:150,0,63	0/1:9,14:23:1.94:432,0,2	1/1:5,5:9:7.54:153,8,0	1/1:13,17:30:7.88:550,8,0	0/0:14,0:14:36.62:0,37,478	0/0:18,0:18:22.57:0,23,491	0/0:29,0:29:84.17:0,84,1044	0/0:22,0:22:51.04:0,51,661	0/1:15,16:29:3.72:482,0,4	1/1:10,11:22:2.53:389,3,0	0/0:11,0:11:33.09:0,33,427
chr10	93111557	.	TG	T	1246.94	PASS	AB=0.792;AC=7;AF=0.125;AN=56;BaseQRankSum=6.382;DP=653;FS=5.995;HRun=1;HaplotypeScore=159.2322;InbreedingCoeff=0.3308;MQ=60.88;MQ0=2;MQRankSum=-2.514;QD=8.97;ReadPosRankSum=-0.360;VQSLOD=0.9378;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:26.15:296,26,0	0/1:2,2:4:2.17:44,0,2	0/0:33,0:23:62.84:0,63,625	0/0:18,0:12:29.38:0,29,306	0/1:27,0:27:5.07:5,0,45	0/0:19,0:19:54.10:0,54,657	0/0:18,0:18:54.06:0,54,677	0/0:33,0:33:96.10:0,96,1110	0/0:28,0:28:7.16:0,7,97	0/0:31,0:31:52.10:0,52,204	0/0:15,0:15:14.71:0,15,104	0/0:34,0:34:92.46:0,92,1148	0/0:23,0:23:56.54:0,57,739	0/0:24,0:24:51.61:0,52,757	0/1:19,6:25:4.31:334,0,4	0/0:26,0:26:28.43:0,28,119	0/1:15,9:24:37.06:371,0,37	0/1:17,8:25:50.37:330,0,50	0/0:23,0:23:35.84:0,36,132	0/0:11,0:10:7.45:0,7,41	0/0:30,0:30:31.18:0,31,136	0/0:14,0:14:42.01:0,42,492	0/0:18,0:18:47.58:0,48,514	0/0:30,0:30:90.03:0,90,1062	0/0:21,0:21:54.15:0,54,699	0/0:31,0:29:40.07:0,40,211	0/0:23,0:23:19.75:0,20,161	0/0:11,0:11:33.10:0,33,432
chr10	93111562	.	G	GTT	10929.01	PASS	AB=0.666;AC=24;AF=0.429;AN=56;BaseQRankSum=13.514;DP=667;FS=1.655;HRun=1;HaplotypeScore=140.1877;InbreedingCoeff=0.5467;MQ=60.51;MQ0=2;MQRankSum=-2.436;QD=29.30;ReadPosRankSum=3.796;VQSLOD=4.9095;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:37:1.77:669,0,2	1/1:4,2:6:11.60:132,12,0	0/0:35,0:25:23.45:0,23,694	0/0:18,0:12:29.54:0,30,325	0/1:11,17:28:35.69:712,0,36	0/0:20,0:20:60.17:0,60,863	0/0:19,0:19:54.17:0,54,788	0/0:31,0:31:93.20:0,93,1271	1/1:13,15:28:18.69:936,19,0	0/1:15,14:29:25.03:913,0,25	1/1:3,11:20:48.05:672,48,0	0/0:29,0:29:81.24:0,81,1162	0/0:23,0:23:63.20:0,63,924	0/0:25,0:25:66.18:0,66,926	1/1:6,17:23:61.55:912,62,0	1/1:13,15:29:2.73:872,3,0	1/1:14,10:24:63.91:828,64,0	1/1:15,11:25:69.52:813,70,0	0/1:10,14:24:28.65:697,0,29	1/1:7,5:11:10.13:273,10,0	0/1:14,18:32:13.88:863,0,14	0/0:14,0:14:42.10:0,42,593	0/0:17,0:17:48.14:0,48,670	0/0:29,0:29:87.21:0,87,1241	0/0:22,0:22:57.17:0,57,816	0/1:15,16:29:24.08:900,0,24	1/1:12,11:24:8.24:735,8,0	0/0:12,0:12:29.69:0,30,470
chr10	93112106	.	AC	A	7287.81	PASS	AB=0.939;AC=33;AF=0.589;AN=56;BaseQRankSum=13.372;DP=441;FS=6.685;HRun=1;HaplotypeScore=106.9817;InbreedingCoeff=0.6710;MQ=61.16;MQ0=3;MQRankSum=-4.891;QD=26.70;ReadPosRankSum=5.275;VQSLOD=4.4732;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:22:57.05:687,57,0	1/1:0,1:1:3.01:39,3,0	0/0:21,0:9:23.56:0,24,179	0/0:12,0:7:16.22:0,16,108	1/1:2,37:39:96.77:1095,97,0	0/0:20,0:20:54.36:0,54,495	0/0:14,0:14:9.76:0,10,395	0/0:34,0:34:12.83:0,13,227	1/1:0,5:5:6.02:77,6,0	1/1:1,11:11:29.79:338,30,0	1/1:1,26:27:75.05:919,75,0	0/1:11,2:12:11.51:12,0,87	0/1:18,1:19:38.53:39,0,80	0/1:13,0:13:22.01:22,0,64	1/1:1,12:13:39.11:510,39,0	1/1:0,19:19:45.15:603,45,0	1/1:0,14:14:39.10:508,39,0	1/1:1,5:6:18.04:224,18,0	1/1:1,7:8:23.71:271,24,0	1/1:0,14:14:41.96:487,42,0	1/1:0,2:2:6.02:77,6,0	0/0:11,0:11:6.57:0,7,27	0/0:13,0:13:11.15:0,11,93	0/0:8,0:8:3.57:0,4,66	0/0:23,1:24:12.86:0,13,177	1/1:2,17:19:57.12:714,57,0	1/1:1,25:25:54.10:666,54,0	0/0:11,0:11:30.01:0,30,309
chr10	93112107	.	CA	C	4223.72	PASS	AB=0.825;AC=46;AF=0.821;AN=56;BaseQRankSum=5.901;DP=456;FS=0.000;HRun=13;HaplotypeScore=122.9896;InbreedingCoeff=0.6551;MQ=60.45;MQ0=3;MQRankSum=-1.137;QD=10.61;ReadPosRankSum=4.245;VQSLOD=3.8966;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:25:32.27:235,32,0	1/1:1,0:1:2.96:19,3,0	0/1:21,0:9:3.97:4,0,43	0/0:12,0:7:3.47:0,3,26	1/1:41,0:41:47.42:323,47,0	0/0:17,1:20:16.82:0,17,298	0/0:15,0:15:18.53:0,19,304	1/1:12,21:35:44.86:455,45,0	1/1:6,0:6:8.51:47,9,0	1/1:13,0:12:12.35:93,12,0	1/1:27,0:27:60.39:332,60,0	0/1:6,7:12:8.32:110,0,8	1/1:4,14:18:35.76:260,36,0	1/1:5,6:12:22.80:152,23,0	1/1:13,0:13:35.45:180,35,0	1/1:21,0:21:43.22:234,43,0	1/1:15,0:15:31.46:176,31,0	1/1:6,0:6:15.32:82,15,0	1/1:9,0:9:10.22:79,10,0	1/1:14,0:14:31.60:176,32,0	1/1:2,0:2:5.91:38,6,0	1/1:2,10:12:31.62:224,32,0	1/1:2,8:13:10.57:129,11,0	1/1:3,5:8:14.91:109,15,0	1/1:5,16:24:8.28:275,8,0	1/1:20,0:20:36.99:237,37,0	1/1:28,0:27:43.14:255,43,0	0/0:11,0:11:18.03:0,18,175
chr10	93112751	.	GCA	G	8708.54	PASS	AB=0.885;AC=31;AF=0.554;AN=56;BaseQRankSum=13.539;DP=698;FS=7.637;HRun=0;HaplotypeScore=84.3358;InbreedingCoeff=0.8770;MQ=66.18;MQ0=8;MQRankSum=-1.407;QD=23.66;ReadPosRankSum=0.685;VQSLOD=5.3329;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,35:45:90.07:1060,90,0	1/1:2,7:9:21.07:257,21,0	0/0:47,0:29:27.53:0,28,467	0/0:45,0:29:46.29:0,46,756	1/1:4,10:14:24.07:293,24,0	0/0:22,1:23:20.52:0,21,833	0/0:19,0:19:2.68:0,3,547	0/0:28,0:28:51.17:0,51,811	1/1:1,15:16:33.10:403,33,0	1/1:4,16:20:45.14:547,45,0	1/1:7,7:14:21.07:257,21,0	0/0:28,3:31:4.92:0,5,1086	0/0:32,2:34:16.96:0,17,1282	0/0:34,0:34:81.24:0,81,1284	1/1:10,21:31:60.19:733,60,0	1/1:7,14:21:42.13:513,42,0	1/1:4,25:29:62.41:740,62,0	1/1:3,14:17:39.12:477,39,0	1/1:5,12:16:35.85:415,36,0	1/1:2,13:16:35.93:406,36,0	1/1:7,45:54:99:1545,132,0	0/0:7,0:7:15.05:0,15,242	0/0:19,0:19:54.18:0,54,870	0/0:24,0:24:57.19:0,57,925	0/1:20,2:23:36.32:36,0,620	1/1:8,16:24:48.15:586,48,0	1/1:4,14:18:36.11:440,36,0	0/0:17,1:18:17.64:0,18,739
chr10	93115500	.	TACACACAC	T	1960.29	PASS	AB=0.714;AC=16;AF=0.308;AN=52;BaseQRankSum=2.337;DP=544;FS=11.542;HRun=0;HaplotypeScore=143.8772;InbreedingCoeff=0.6341;MQ=68.67;MQ0=14;MQRankSum=-3.949;QD=13.43;ReadPosRankSum=1.128;VQSLOD=2.1982;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:12.03:0,12,455	0/0:6,0:6:15.05:0,15,507	./.	./.	1/1:14,1:14:8.37:107,8,0	0/0:40,0:39:30.10:0,30,916	0/0:17,0:17:7.12:0,7,212	0/0:23,0:23:12.04:0,12,305	1/1:8,7:16:3.18:392,3,0	0/1:6,4:9:66.67:209,0,67	1/1:11,2:11:9:171,9,0	0/0:15,0:19:18.06:0,18,661	0/0:12,0:17:12.04:0,12,358	0/0:8,0:12:9.03:0,9,340	0/0:11,0:10:9.03:0,9,336	1/1:7,14:21:26.94:624,27,0	0/0:20,0:24:24.97:0,25,832	0/0:14,0:15:25.33:0,25,826	1/1:7,1:7:3.01:45,3,0	1/1:14,1:22:17.61:165,18,0	0/0:20,0:19:9.03:0,9,112	0/0:8,0:23:13.48:0,13,417	0/0:14,0:13:18.06:0,18,587	0/0:25,0:33:39.13:0,39,1301	0/0:10,0:13:6.02:0,6,198	1/1:15,4:18:12.04:240,12,0	0/1:12,1:19:65.89:183,0,66	0/0:10,0:9:9.03:0,9,220
chr10	93115623	.	T	TTTTG	2732.27	PASS	AB=0.615;AC=11;AF=0.196;AN=56;BaseQRankSum=5.769;DP=596;FS=3.475;HRun=0;HaplotypeScore=135.9728;InbreedingCoeff=0.8867;MQ=71.32;MQ0=2;MQRankSum=-10.197;QD=25.54;ReadPosRankSum=-1.890;VQSLOD=3.0027;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:20:21.82:340,22,0	1/1:5,0:7:15.05:257,15,0	0/0:27,0:26:11.46:0,11,278	0/0:22,0:20:21.07:0,21,332	0/0:24,0:24:48.16:0,48,784	0/0:25,0:25:48.16:0,48,784	0/0:14,0:14:39.13:0,39,631	0/0:42,0:42:66.14:0,66,954	0/0:17,0:17:36.06:0,36,534	0/0:17,0:17:36.12:0,36,587	0/0:22,0:22:54.16:0,54,835	0/0:17,0:17:33.11:0,33,538	0/0:23,0:23:45.15:0,45,735	0/0:25,0:25:54.18:0,54,879	1/1:14,0:23:45.14:729,45,0	0/0:20,0:20:42.14:0,42,685	1/1:17,0:17:21.03:371,21,0	1/1:13,0:16:20.55:305,21,0	0/0:13,0:13:12.04:0,12,180	0/0:28,0:28:66.23:0,66,1075	0/0:24,0:24:54.17:0,54,857	0/0:24,0:24:54.17:0,54,857	0/0:22,0:22:60.18:0,60,929	0/0:15,0:14:26.98:0,27,440	0/0:18,0:18:42.14:0,42,682	0/0:33,0:33:75.26:0,75,1223	0/0:17,0:17:36.12:0,36,588	0/1:9,15:22:6.84:907,0,7
chr10	93115662	.	CT	C	12261.84	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=14.052;DP=648;FS=3.824;HRun=2;HaplotypeScore=84.5500;InbreedingCoeff=0.9996;MQ=79.40;MQ0=2;MQRankSum=-3.959;QD=35.34;ReadPosRankSum=3.342;VQSLOD=5.4418;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:81.26:1036,81,0	1/1:0,8:8:24.08:311,24,0	0/0:20,0:20:54.17:0,54,771	0/0:20,0:20:59.93:0,60,771	1/1:0,24:24:72.23:935,72,0	0/0:28,0:28:84.25:0,84,1217	0/0:20,0:20:60.18:0,60,862	0/0:35,0:35:99:0,105,1519	1/1:0,18:18:51.17:662,51,0	1/1:1,18:19:54.18:701,54,0	1/1:0,30:30:81.26:1052,81,0	0/0:23,0:23:69.23:0,69,1032	0/0:19,0:19:57.19:0,57,853	0/0:27,0:27:81.27:0,81,1196	1/1:1,29:30:81.26:1050,81,0	1/1:0,26:26:72.23:934,72,0	1/1:5,13:18:42.09:525,42,0	1/1:1,10:11:27.09:350,27,0	1/1:0,18:18:54.14:670,54,0	1/1:0,34:34:93.25:1169,93,0	1/1:1,26:27:78.25:1013,78,0	0/0:27,0:27:81.23:0,81,1154	0/0:21,0:21:63.20:0,63,917	0/0:21,0:20:63.21:0,63,944	0/0:18,0:18:54.18:0,54,809	1/1:0,34:34:99:1270,99,0	1/1:0,18:18:45.15:584,45,0	0/0:22,0:20:54.18:0,54,808
chr10	93117012	.	TCTGCAGCA	T	4614.64	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.720;DP=689;FS=3.155;HRun=0;HaplotypeScore=219.5462;InbreedingCoeff=0.9975;MQ=84.46;MQ0=0;MQRankSum=-11.812;QD=64.99;ReadPosRankSum=1.575;VQSLOD=4.7937;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,6195	1/1:2,6:8:18.06:509,18,0	0/0:26,0:26:69.22:0,69,2663	0/0:23,0:23:54.18:0,54,2036	0/0:18,0:18:51.18:0,51,2257	0/0:34,0:33:99:0,99,4104	0/0:27,0:27:72.25:0,72,3096	0/0:42,0:42:99:0,111,4645	0/0:31,0:31:90.31:0,90,3857	0/0:26,0:25:75.26:0,75,3326	0/0:20,0:20:54.17:0,54,2117	0/0:28,0:27:69.22:0,69,2903	0/0:21,0:21:54.19:0,54,2345	0/0:30,0:30:87.30:0,87,3754	1/1:4,25:29:69.19:1887,69,0	0/0:34,0:33:90.31:0,90,3880	1/1:3,19:22:48.12:1294,48,0	1/1:1,11:12:33.11:925,33,0	0/0:19,0:19:48.16:0,48,1901	0/0:26,0:26:72.25:0,72,3078	0/0:30,0:30:84.29:0,84,3682	0/0:19,0:19:54.19:0,54,2321	0/0:14,0:14:42.14:0,42,1834	0/0:20,0:20:51.18:0,51,2212	0/0:20,0:20:57.20:0,57,2502	0/0:30,0:30:87.28:0,87,3714	0/0:17,0:17:48.16:0,48,2112	0/0:13,0:13:30.10:0,30,1183
chr10	93117160	.	G	GTTT	6695.36	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=0.776;DP=641;FS=13.814;HRun=22;HaplotypeScore=164.3028;InbreedingCoeff=0.5642;MQ=61.95;MQ0=5;MQRankSum=0.558;QD=11.22;ReadPosRankSum=-1.864;VQSLOD=-0.2886;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:24:15.68:16,0,16	1/1:4,0:4:11.98:122,12,0	0/0:31,0:15:6.20:0,6,37	0/1:20,0:9:0:0,0,0	1/1:25,0:24:45.91:418,46,0	1/1:20,0:21:15.31:213,15,0	1/1:17,0:17:17.92:185,18,0	1/1:34,0:34:61.39:573,61,0	1/1:13,0:12:29.46:311,29,0	1/1:42,0:40:66.22:595,66,0	1/1:29,0:29:42.52:469,43,0	1/1:14,3:18:5.69:54,6,0	1/1:21,0:21:21.30:169,21,0	1/1:13,0:25:14.33:101,14,0	1/1:20,0:20:19.16:172,19,0	1/1:26,0:25:59.61:589,60,0	1/1:26,0:26:18.98:204,19,0	1/1:24,0:23:28.56:295,29,0	1/1:24,0:24:35.93:388,36,0	1/1:31,0:31:56.09:486,56,0	1/1:12,0:12:9.86:104,10,0	1/1:13,1:27:1.70:206,2,0	1/1:11,0:24:7.01:30,7,0	1/1:13,0:13:18.39:175,18,0	1/1:12,3:23:9.96:102,10,0	1/1:30,0:29:33.64:315,34,0	1/1:22,0:22:48.71:406,49,0	0/0:9,0:13:23.10:0,23,159
chr10	93117272	.	G	GT	5956.43	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-11.715;DP=549;FS=0.746;HRun=7;HaplotypeScore=57.5534;InbreedingCoeff=0.9963;MQ=68.27;MQ0=0;MQRankSum=2.985;QD=27.45;ReadPosRankSum=0.940;VQSLOD=5.4922;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:84.10:0,84,804	0/0:12,0:12:30.04:0,30,290	0/0:16,0:15:33:0,33,299	0/0:13,0:13:30.02:0,30,281	1/1:2,24:26:66.08:748,66,0	0/0:17,0:17:45.07:0,45,435	0/0:14,0:14:15.80:0,16,298	0/0:29,0:29:81.12:0,81,782	1/1:1,14:15:24.07:290,24,0	1/1:5,24:29:69.21:833,69,0	1/1:3,11:14:27.08:326,27,0	0/0:23,0:23:54.07:0,54,515	0/0:10,0:10:30.05:0,30,289	0/0:13,0:13:36.06:0,36,348	0/0:24,0:24:54.07:0,54,521	1/1:5,24:29:69.21:834,69,0	0/0:33,0:33:81.04:0,81,765	0/0:21,0:21:51.05:0,51,485	1/1:2,17:20:48.01:558,48,0	1/1:1,16:18:50.95:562,51,0	1/1:1,9:10:24.07:290,24,0	0/0:12,0:12:36.06:0,36,347	0/0:20,0:20:48.06:0,48,457	0/0:14,0:14:36.04:0,36,341	0/0:18,0:17:54.09:0,54,522	1/1:4,22:26:63.13:731,63,0	1/1:8,22:30:66.19:785,66,0	0/0:8,0:8:20.91:0,21,171
chr10	93117380	.	AGTGCTTCTTAAC	A	4368.95	PASS	AB=0.533;AC=7;AF=0.125;AN=56;BaseQRankSum=9.869;DP=597;FS=13.669;HRun=0;HaplotypeScore=215.0054;InbreedingCoeff=0.8335;MQ=84.68;MQ0=0;MQRankSum=-9.835;QD=87.38;ReadPosRankSum=1.845;VQSLOD=3.6460;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.28:0,87,5304	0/1:1,7:8:99:807,0,167	0/0:21,0:21:63.22:0,63,3251	0/0:19,0:19:54.19:0,54,2736	0/0:20,0:20:60.21:0,60,3424	0/0:26,0:26:72.23:0,72,4353	0/0:26,0:26:75.24:0,75,4289	0/0:26,0:26:78.25:0,78,4357	0/0:24,0:24:72.25:0,72,4295	0/0:26,0:26:78.27:0,78,4577	0/0:21,0:21:63.22:0,63,3732	0/0:32,0:32:96.33:0,96,5633	0/0:21,0:21:63.22:0,63,3694	0/0:18,0:18:54.19:0,54,3221	1/1:0,17:17:36.12:1425,36,0	0/0:38,0:38:99:0,108,6108	1/1:0,18:18:36.12:1425,36,0	1/1:0,7:7:18.06:713,18,0	0/0:18,0:18:54.19:0,54,2776	0/0:19,0:19:57.17:0,57,3172	0/0:37,0:37:99:0,111,6596	0/0:21,0:21:63.22:0,63,3828	0/0:18,0:18:51.18:0,51,2785	0/0:16,0:16:48.16:0,48,2681	0/0:17,0:17:51.18:0,51,2973	0/0:20,0:20:60.20:0,60,3252	0/0:25,0:25:75.26:0,75,4402	0/0:9,0:9:27.09:0,27,1558
chr10	93119134	.	TACACACACAC	T	2991.01	PASS	AB=0.813;AC=21;AF=0.375;AN=56;BaseQRankSum=2.532;DP=625;FS=0.679;HRun=0;HaplotypeScore=173.6486;InbreedingCoeff=0.7574;MQ=64.13;MQ0=11;MQRankSum=-5.986;QD=14.96;ReadPosRankSum=2.012;VQSLOD=2.8313;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:42:23.92:0,24,905	0/0:8,0:12:3.69:0,4,258	0/0:33,0:20:3.01:0,3,72	0/0:39,0:28:0.47:0,0,1	1/1:21,6:27:9.50:267,10,0	0/0:14,0:26:27.56:0,28,1132	0/0:13,0:17:12.51:0,13,464	0/0:27,0:27:18.06:0,18,828	1/1:16,8:24:18.06:536,18,0	0/1:10,3:13:0.20:109,0,0	1/1:8,4:13:9.03:268,9,0	0/0:21,0:32:37.36:0,37,1446	0/0:10,0:14:25.90:0,26,1049	0/0:15,0:19:20.90:0,21,927	0/0:15,0:27:21.07:0,21,935	1/1:7,10:17:24.08:715,24,0	0/0:13,0:25:30.10:0,30,1335	0/0:5,0:18:18.06:0,18,790	1/1:12,3:15:0.13:230,0,0	1/1:20,5:27:18.06:457,18,0	1/1:27,0:26:2.99:25,3,0	0/0:11,0:23:21.06:0,21,849	0/0:10,0:16:7.87:0,8,411	0/0:19,0:32:27.09:0,27,1226	0/0:15,0:20:27.08:0,27,1031	1/1:11,1:12:9.02:186,9,0	1/1:15,3:17:6.02:179,6,0	1/1:3,0:6:9.03:209,9,0
chr10	93120231	.	T	TA	3165.87	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-11.755;DP=496;FS=0.435;HRun=8;HaplotypeScore=45.7547;InbreedingCoeff=0.9840;MQ=75.24;MQ0=0;MQRankSum=-0.131;QD=28.02;ReadPosRankSum=3.831;VQSLOD=3.8107;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:47.98:0,48,428	0/0:6,0:6:18.01:0,18,165	0/0:15,0:15:23.38:0,23,232	0/0:8,0:7:11.58:0,12,86	0/0:24,0:24:66.02:0,66,599	0/0:20,0:20:57.02:0,57,519	0/0:10,0:10:27.01:0,27,247	0/0:38,0:38:87:0,87,785	0/0:14,0:14:42.01:0,42,380	0/0:27,0:28:74.07:0,74,665	0/0:19,0:19:51.01:0,51,462	1/1:3,13:16:15.29:360,15,0	1/1:1,17:18:51.15:588,51,0	1/1:2,17:19:45.13:519,45,0	0/0:15,0:15:41.95:0,42,370	0/0:18,0:18:42.01:0,42,381	0/0:13,0:13:36.02:0,36,329	0/0:22,0:22:63.01:0,63,571	0/0:17,0:17:36.01:0,36,329	0/0:24,0:24:68.98:0,69,619	0/0:6,0:7:14.95:0,15,128	1/1:1,10:11:27.08:312,27,0	1/1:1,16:17:51.14:580,51,0	1/1:1,8:9:24.07:277,24,0	1/1:1,22:23:63.19:727,63,0	0/0:26,0:26:75.04:0,75,686	0/0:35,0:35:96.05:0,96,878	0/0:6,0:6:18.01:0,18,165
chr10	93122849	.	C	CTTTTTG	21536.84	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=18.007;DP=595;FS=5.880;HRun=0;HaplotypeScore=173.3489;InbreedingCoeff=0.9958;MQ=63.40;MQ0=0;MQRankSum=-18.656;QD=91.26;ReadPosRankSum=-1.050;VQSLOD=5.7778;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,21:26:72.25:2477,72,0	0/0:9,0:9:27.09:0,27,656	0/0:13,0:13:34.35:0,34,606	0/0:9,0:9:13.32:0,13,209	1/1:9,17:26:71.26:2068,71,0	0/0:26,0:26:72.19:0,72,1603	0/0:31,0:31:90.28:0,90,2062	0/0:28,0:28:81.25:0,81,1814	1/1:5,19:24:60.27:2392,60,0	1/1:7,13:20:54.19:1914,54,0	1/1:5,9:14:33.10:914,33,0	0/0:24,0:24:72.25:0,72,1721	0/0:28,0:28:81.28:0,81,1934	0/0:26,0:26:75.23:0,75,1699	0/0:41,0:41:99:0,114,2703	1/1:3,20:23:69.22:2354,69,0	0/0:24,0:24:66.23:0,66,1578	0/0:10,0:10:24.08:0,24,583	1/1:7,7:15:39.13:1343,39,0	1/1:6,21:27:78.23:2480,78,0	1/1:7,4:12:30.10:702,30,0	0/0:16,0:16:48.16:0,48,1139	0/0:14,0:14:42.14:0,42,1018	0/0:33,0:33:96.26:0,96,2197	0/0:18,0:18:54.19:0,54,1312	1/1:7,21:28:69.48:2715,69,0	1/1:3,18:21:63.22:2176,63,0	0/0:8,0:8:24.08:0,24,582
chr10	93122850	.	TAG	T	1897.87	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=18.265;DP=552;FS=4.496;HRun=0;HaplotypeScore=175.0712;InbreedingCoeff=0.9873;MQ=65.77;MQ0=0;MQRankSum=-16.964;QD=10.04;ReadPosRankSum=2.792;VQSLOD=3.0589;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:56.12:243,56,0	0/0:9,0:9:27.09:0,27,548	0/0:12,0:13:11.85:0,12,450	0/0:11,0:10:19.51:0,20,335	1/1:18,1:19:25.42:141,25,0	0/0:28,0:28:81.28:0,81,1602	0/0:33,0:33:99:0,99,1908	0/0:28,0:28:84.27:0,84,1611	1/1:21,0:21:53.38:237,53,0	1/1:15,0:15:33.72:129,34,0	1/1:10,1:11:21.38:158,21,0	0/0:25,0:25:75.26:0,75,1490	0/0:27,0:27:81.28:0,81,1625	0/0:25,0:25:75.24:0,75,1469	0/0:39,0:39:99:0,117,2327	1/1:21,0:21:50.39:188,50,0	0/0:24,0:24:69.24:0,69,1384	0/0:9,0:9:24.08:0,24,488	1/1:9,0:9:21.24:122,21,0	1/1:21,0:22:55.57:333,56,0	1/1:6,0:6:11.11:80,11,0	0/0:17,0:17:51.17:0,51,999	0/0:14,0:14:42.14:0,42,852	0/0:33,0:33:99:0,99,1957	0/0:19,0:19:57.20:0,57,1144	1/1:21,2:23:60.86:290,61,0	1/1:18,0:18:46.62:203,47,0	0/0:9,0:9:27.08:0,27,513
chr10	93122852	.	G	GTGCT	18576.53	PASS	AB=0.923;AC=23;AF=0.411;AN=56;BaseQRankSum=19.109;DP=605;FS=8.312;HRun=0;HaplotypeScore=182.2066;InbreedingCoeff=0.9253;MQ=62.33;MQ0=0;MQRankSum=-19.448;QD=70.10;ReadPosRankSum=-0.107;VQSLOD=5.5923;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,21:35:93.32:2567,93,0	0/0:9,0:9:27.09:0,27,560	0/1:11,0:12:32.89:33,0,381	0/0:11,0:10:24.05:0,24,349	1/1:3,17:20:51.04:1245,51,0	0/0:28,0:28:81.28:0,81,1627	0/0:32,0:32:93.31:0,93,1876	0/0:25,0:25:75.25:0,75,1525	1/1:4,19:23:67.78:1815,68,0	1/1:10,12:23:67.46:1785,67,0	1/1:5,9:14:36.12:860,36,0	0/0:25,0:25:72.25:0,72,1475	0/0:26,0:26:78.23:0,78,1589	0/0:24,0:24:69.22:0,69,1398	0/0:37,0:37:99:0,108,2238	1/1:7,20:27:78.21:2063,78,0	0/0:23,0:23:66.23:0,66,1380	0/0:8,0:8:24.08:0,24,501	1/1:7,7:14:39.60:1007,40,0	1/1:10,21:31:84.29:2185,84,0	1/1:7,5:12:29.73:673,30,0	0/0:16,0:16:48.16:0,48,990	0/0:14,0:14:42.14:0,42,857	0/0:33,0:33:99:0,99,1978	0/0:20,0:20:56.23:0,56,1182	1/1:8,21:29:87.28:2367,87,0	1/1:7,18:25:72.25:1978,72,0	0/0:9,0:9:27.08:0,27,506
chr10	93123354	.	A	ACAGGTGTG	18019.93	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-0.142;DP=700;FS=0.000;HRun=0;HaplotypeScore=219.8056;InbreedingCoeff=0.9761;MQ=80.01;MQ0=0;MQRankSum=-16.574;QD=69.84;ReadPosRankSum=-4.474;VQSLOD=3.6146;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,21:32:60.12:2078,60,0	0/0:10,0:10:24.08:0,24,621	0/0:26,0:26:71.12:0,71,1983	0/0:44,0:44:99:0,108,2726	1/1:7,19:27:5.77:59,6,0	0/0:22,0:20:57.18:0,57,1563	0/0:34,0:34:90.29:0,90,2418	0/0:24,0:24:60.21:0,60,1667	1/1:7,16:23:66.23:2558,66,0	1/1:9,15:24:60.16:2440,60,0	1/1:4,14:18:21.03:766,21,0	0/0:34,0:34:99:0,99,2624	0/0:34,0:34:93.29:0,93,2496	0/0:21,0:21:63.16:0,63,1719	0/0:40,0:40:99:0,99,2674	1/1:11,13:25:69.15:2682,69,0	0/0:25,0:25:69.21:0,69,1910	0/0:18,0:18:51.18:0,51,1463	1/1:14,6:20:44.90:1528,45,0	1/1:3,13:16:12.04:509,12,0	1/1:15,7:18:21.07:835,21,0	0/0:19,0:19:48.16:0,48,1375	0/0:26,0:26:42.14:0,42,1204	0/0:31,0:31:81.28:0,81,2317	0/0:29,0:29:81.23:0,81,2152	1/1:15,13:28:69.22:2632,69,0	1/1:6,15:22:51.13:1932,51,0	0/0:5,0:5:15.05:0,15,431
chr10	93123385	.	C	CTG	5325.34	PASS	AB=0.944;AC=34;AF=0.630;AN=54;BaseQRankSum=2.360;DP=697;FS=12.675;HRun=0;HaplotypeScore=175.0529;InbreedingCoeff=0.5902;MQ=53.72;MQ0=25;MQRankSum=0.281;QD=10.85;ReadPosRankSum=2.145;VQSLOD=3.7084;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:24:0:0,0,0	0/0:12,0:12:17.97:0,18,206	0/0:45,0:20:39.12:0,39,483	0/0:47,0:21:29.97:0,30,341	0/1:19,0:18:0:0,0,0	1/1:16,7:21:30.09:472,30,0	1/1:22,6:28:26.84:418,27,0	1/1:26,3:28:65.48:926,65,0	0/1:20,0:20:0.02:1,0,0	1/1:27,0:24:20.42:105,20,0	0/1:18,0:18:0:0,0,0	1/1:19,10:28:48.16:777,48,0	1/1:23,8:29:1.64:559,2,0	0/1:22,3:24:4.43:383,0,4	0/0:35,0:35:39.12:0,39,490	1/1:26,0:22:6.10:36,6,0	0/0:23,0:22:30.10:0,30,377	0/0:13,0:13:30.05:0,30,359	1/1:25,0:23:1.25:37,1,0	1/1:20,0:19:2.84:14,3,0	./.	0/1:19,8:27:13.40:311,0,13	1/1:5,21:24:15.05:247,15,0	1/1:16,10:24:1.02:332,1,0	1/1:19,10:29:33.11:547,33,0	1/1:21,0:19:18.19:114,18,0	1/1:15,0:15:4.44:48,4,0	0/0:5,0:5:8.97:0,9,113
chr10	93123395	.	GTGA	G	2708.05	PASS	AB=0.889;AC=27;AF=0.482;AN=56;BaseQRankSum=3.107;DP=701;FS=27.459;HRun=0;HaplotypeScore=174.1791;InbreedingCoeff=0.2492;MQ=43.87;MQ0=52;MQRankSum=-1.708;QD=5.74;ReadPosRankSum=-3.005;VQSLOD=0.6217;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:25:3.01:41,3,0	0/0:11,0:11:17.95:0,18,253	0/0:43,0:14:39.13:0,39,624	0/0:51,0:17:34.95:0,35,480	0/0:21,0:19:0:0,0,0	0/1:20,3:21:11.70:12,0,155	0/1:24,6:29:21.23:48,0,21	0/1:26,11:34:99:269,0,274	1/1:20,0:19:17.85:235,18,0	1/1:28,0:21:57.09:689,57,0	0/1:17,0:16:0:0,0,0	0/1:28,6:33:68.33:68,0,129	0/1:22,3:23:43.79:44,0,193	0/1:24,3:25:66.39:66,0,92	0/0:35,0:35:39.39:0,39,618	1/1:28,0:24:23.01:226,23,0	0/0:25,0:23:30.08:0,30,453	0/0:11,0:11:31.27:0,31,388	1/1:19,0:17:42.09:528,42,0	0/1:18,0:17:0:0,0,0	1/1:22,0:16:0.89:2,1,0	0/1:25,3:28:36.01:36,0,88	0/0:25,0:23:12.04:0,12,151	0/1:22,2:22:44.82:45,0,122	0/1:21,6:26:3.11:3,0,66	1/1:20,0:18:38.81:387,39,0	1/1:16,0:14:17.07:186,17,0	0/0:7,0:5:10.53:0,11,163
chr10	93123423	.	TGTGAGAGAGAGAGAGAGAGA	T	1008.26	PASS	AB=0.788;AC=10;AF=0.185;AN=54;BaseQRankSum=0.867;DP=581;FS=1.106;HRun=0;HaplotypeScore=198.8332;InbreedingCoeff=0.4373;MQ=35.26;MQ0=53;MQRankSum=-3.507;QD=9.60;ReadPosRankSum=2.064;VQSLOD=2.8352;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:21:6.02:0,6,201	1/1:2,6:8:3.01:36,3,0	0/0:14,0:1:2.99:0,3,24	./.	0/0:14,0:12:5.62:0,6,143	0/0:24,0:22:27.05:0,27,653	0/0:28,0:27:5.67:0,6,19	0/0:38,0:35:72.18:0,72,1105	0/0:21,0:20:15.05:0,15,717	0/0:19,0:13:29.62:0,30,601	0/0:12,0:11:0:0,0,0	0/0:24,0:23:21.70:0,22,534	0/0:25,0:23:39.71:0,40,1168	0/0:24,0:21:12.87:0,13,358	1/1:3,26:29:3.48:164,3,0	0/0:25,0:21:19.70:0,20,399	0/1:6,17:21:76.88:164,0,77	1/1:11,0:11:21:592,21,0	0/0:8,0:7:9.64:0,10,50	0/0:16,0:14:6.96:0,7,168	1/1:23,0:16:1.17:2,1,0	0/0:27,0:26:9.01:0,9,449	0/0:20,0:18:14.99:0,15,295	0/0:28,0:26:18.02:0,18,668	0/0:23,0:20:5.99:0,6,50	0/0:23,0:21:46.98:0,47,1137	0/0:14,0:11:26.93:0,27,1039	0/1:10,0:7:69.88:183,0,70
chr10	93123425	.	TGAGAGAGAGAGAGAGA	T	671.71	PASS	AB=0.917;AC=8;AF=0.167;AN=48;BaseQRankSum=4.140;DP=578;FS=2.910;HRun=0;HaplotypeScore=177.5896;InbreedingCoeff=0.3392;MQ=34.70;MQ0=52;MQRankSum=-1.968;QD=6.65;ReadPosRankSum=1.695;VQSLOD=2.9310;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:20:5.98:0,6,163	0/1:8,0:8:0:0,0,0	./.	./.	0/0:13,0:12:5.74:0,6,83	0/0:24,0:22:16.02:0,16,330	0/0:28,0:27:5.70:0,6,79	0/0:39,0:36:27.02:0,27,834	0/0:21,0:20:15.05:0,15,551	0/0:22,0:16:21.53:0,22,520	./.	0/0:24,0:23:9.50:0,10,366	0/0:24,0:22:24.93:0,25,814	0/0:27,0:24:10.92:0,11,343	1/1:29,0:28:3.48:125,3,0	0/0:23,0:19:5.85:0,6,236	0/1:20,0:18:46.40:106,0,46	1/1:9,0:11:11.68:335,12,0	0/0:13,0:12:9.86:0,10,30	0/0:16,0:13:6.95:0,7,119	0/1:23,0:17:0.27:2,0,0	0/0:25,0:24:6.02:0,6,317	0/0:19,0:18:3.01:0,3,158	0/0:27,0:26:12.03:0,12,512	./.	0/0:23,0:21:7.83:0,8,800	0/0:16,0:13:24.08:0,24,899	0/1:5,4:7:23.27:221,0,23
chr10	93123669	.	T	TCCTG	12936.18	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-10.040;DP=664;FS=20.668;HRun=0;HaplotypeScore=106.7664;InbreedingCoeff=0.9893;MQ=78.68;MQ0=0;MQRankSum=-5.174;QD=45.39;ReadPosRankSum=1.889;VQSLOD=3.9930;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,42:52:78.27:2008,78,0	0/0:7,0:7:21.07:0,21,398	0/0:29,0:28:75.25:0,75,1295	0/0:24,0:22:50.89:0,51,850	1/1:0,15:16:18.06:471,18,0	0/0:33,0:32:93.27:0,93,1678	0/0:21,0:21:57.18:0,57,1038	0/0:24,0:24:63.15:0,63,1028	1/1:1,24:26:63.22:1697,63,0	1/1:3,8:15:20.99:462,21,0	1/1:1,10:14:12.04:319,12,0	0/0:22,0:22:63.19:0,63,1131	0/0:26,0:26:72.21:0,72,1260	0/0:28,0:28:75.25:0,75,1364	0/0:31,0:31:90.27:0,90,1605	1/1:1,21:22:57.20:1535,57,0	0/0:23,0:23:60.21:0,60,1132	0/0:6,0:6:18.06:0,18,329	1/1:6,15:23:51.16:1193,51,0	1/1:2,10:16:21.06:516,21,0	1/1:7,30:40:50.99:1315,51,0	0/0:27,0:27:69.11:0,69,1207	0/0:19,0:18:51.17:0,51,936	0/0:29,0:29:87.30:0,87,1651	0/0:24,0:24:69.24:0,69,1303	1/1:3,28:38:90.11:2153,90,0	1/1:1,20:23:48.16:1266,48,0	0/0:6,0:6:15.05:0,15,285
chr10	93123808	.	CGTGTGTGT	C	1313.38	PASS	AB=0.856;AC=17;AF=0.327;AN=52;BaseQRankSum=1.536;DP=634;FS=0.000;HRun=0;HaplotypeScore=189.0289;InbreedingCoeff=0.2508;MQ=69.19;MQ0=15;MQRankSum=-3.898;QD=5.97;ReadPosRankSum=1.184;VQSLOD=2.3823;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:17.59:0,18,385	0/1:6,0:7:15.42:17,0,15	./.	./.	0/0:24,0:22:10.23:0,10,232	1/1:13,0:20:12.99:214,13,0	1/1:13,0:21:2.83:50,3,0	0/0:25,0:24:2.98:0,3,21	0/0:22,0:21:9.50:0,10,224	0/0:21,0:21:30.10:0,30,667	0/0:14,0:14:14.86:0,15,352	0/1:15,0:18:33.21:142,0,33	1/1:11,3:15:9.03:203,9,0	1/1:16,3:19:3.01:74,3,0	0/1:18,0:23:1.10:1,0,89	0/0:20,0:19:2.70:0,3,88	0/1:22,1:25:77.97:183,0,78	0/0:15,0:15:0.47:0,0,1	0/0:18,0:18:12.04:0,12,237	0/0:15,0:20:24.04:0,24,406	0/0:42,0:42:21.81:0,22,406	1/1:10,2:12:6.58:197,7,0	0/1:13,3:16:54.80:126,0,55	0/1:12,4:16:3.83:4,0,64	0/1:25,2:25:99:256,0,100	0/0:30,0:30:42.14:0,42,858	0/0:27,0:26:11.97:0,12,166	0/0:9,0:9:23.98:0,24,350
chr10	93123813	.	G	GTGTGTGTT	5223.76	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=4.539;DP=642;FS=17.573;HRun=0;HaplotypeScore=200.8142;InbreedingCoeff=0.5976;MQ=61.43;MQ0=21;MQRankSum=-0.980;QD=15.32;ReadPosRankSum=-2.912;VQSLOD=2.0702;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:40:4.15:684,4,0	0/0:8,0:8:0.07:0,0,52	0/0:41,0:29:46.39:0,46,525	0/0:37,0:22:47.15:0,47,483	1/1:27,0:25:34.39:355,34,0	0/0:20,0:20:41.15:0,41,391	0/0:21,0:20:28.04:0,28,221	0/0:23,0:22:52.93:0,53,416	1/1:22,0:21:38.61:310,39,0	1/1:20,0:20:58.66:787,59,0	0/1:13,0:12:12.46:280,0,12	0/0:17,0:16:20.46:0,20,289	0/0:14,0:14:32.67:0,33,297	0/0:17,0:17:26.78:0,27,227	0/0:26,0:26:45.35:0,45,375	1/1:6,13:22:2.52:128,3,0	0/0:29,0:28:30.04:0,30,440	0/0:17,0:17:34.71:0,35,246	1/1:18,0:17:27.23:451,27,0	1/1:23,0:22:36.39:349,36,0	1/1:43,0:42:76.61:707,77,0	0/1:12,0:12:29.41:29,0,112	0/0:16,0:15:23.91:0,24,239	0/0:15,0:15:22.30:0,22,203	0/1:27,0:25:12.70:13,0,270	1/1:31,0:31:75.20:981,75,0	0/1:27,0:26:0.15:140,0,0	0/1:14,0:13:10.12:10,0,183
chr10	93123819	.	G	GTT	2760.79	PASS	AB=0.941;AC=17;AF=0.304;AN=56;BaseQRankSum=4.150;DP=662;FS=8.287;HRun=1;HaplotypeScore=140.3161;InbreedingCoeff=0.3129;MQ=56.13;MQ0=27;MQRankSum=-0.060;QD=9.33;ReadPosRankSum=1.634;VQSLOD=0.1913;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:40:31.79:490,32,0	0/0:8,0:8:11:0,11,77	0/0:35,0:24:44.89:0,45,523	0/0:35,0:20:47.15:0,47,483	0/1:27,0:24:12.78:208,0,13	0/0:20,0:20:46.30:0,46,350	0/0:24,0:23:29.60:0,30,235	0/0:24,0:23:61.92:0,62,485	1/1:22,0:21:1.24:261,1,0	0/1:23,0:23:73.19:310,0,73	1/1:11,0:11:5.74:138,6,0	0/0:19,0:17:21.33:0,21,263	0/0:16,0:16:35.64:0,36,279	0/0:18,0:18:35.71:0,36,281	0/0:30,0:30:69.53:0,70,547	1/1:22,0:21:2.49:32,2,0	0/0:32,0:31:43.29:0,43,451	0/0:17,0:17:39.72:0,40,278	0/1:16,0:15:14.27:295,0,14	0/1:22,0:20:9.55:200,0,10	1/1:40,0:39:55.93:589,56,0	0/1:16,0:15:9.40:9,0,86	0/0:24,0:23:18.17:0,18,264	0/0:19,0:19:30.41:0,30,254	0/0:28,0:24:8.11:0,8,215	0/1:31,0:31:61.40:383,0,61	0/1:7,17:23:19.46:19,0,46	0/0:16,0:14:19.77:0,20,240
chr10	93125547	.	AT	A	95.91	PASS	AC=10;AF=0.238;AN=42;BaseQRankSum=2.767;DP=108;FS=4.984;HRun=1;HaplotypeScore=12.0061;InbreedingCoeff=0.4926;MQ=77.68;MQ0=19;MQRankSum=-3.469;QD=7.99;ReadPosRankSum=-1.228;VQSLOD=0.3128;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:3,0:2:6.02:0,6,95	0/0:22,0:7:17.88:0,18,245	0/0:19,0:5:15:0,15,188	./.	0/0:3,0:3:9.03:0,9,141	0/0:2,0:2:6.02:0,6,96	0/0:9,0:9:24.08:0,24,374	1/1:1,2:1:3.01:40,3,0	1/1:0,1:1:3.01:38,3,0	./.	0/0:3,0:3:9.03:0,9,141	0/0:2,0:1:3.01:0,3,46	0/0:2,0:2:6.02:0,6,96	0/0:3,0:2:6.02:0,6,93	1/1:2,1:2:2.98:21,3,0	0/0:3,0:3:9.03:0,9,140	0/0:2,0:1:6.02:0,6,96	1/1:0,2:1:3.01:38,3,0	./.	./.	./.	0/0:2,0:2:3.01:0,3,48	0/0:2,0:2:6.02:0,6,96	0/0:6,0:6:18.06:0,18,287	1/1:0,3:2:6.02:79,6,0	./.	0/0:1,0:1:3.01:0,3,44
chr10	93125622	.	TTAAAAAAAAA	T	2187.32	PASS	AB=0.555;AC=20;AF=0.370;AN=54;BaseQRankSum=5.823;DP=303;FS=21.293;HRun=0;HaplotypeScore=49.4445;InbreedingCoeff=0.6988;MQ=37.58;MQ0=42;MQRankSum=-5.941;QD=16.32;ReadPosRankSum=1.417;VQSLOD=0.3974;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,5:7:9.03:229,9,0	0/0:6,0:6:18.06:0,18,697	0/0:37,0:3:8.78:0,9,61	0/0:30,0:5:3.01:0,3,70	1/1:1,15:17:16.72:323,17,0	0/0:8,0:7:12.03:0,12,294	0/0:3,0:2:5.93:0,6,40	0/0:16,0:10:23.93:0,24,529	1/1:11,0:6:17.67:108,18,0	1/1:6,5:10:26.91:547,27,0	1/1:0,12:12:8.01:190,8,0	0/0:5,0:5:15.05:0,15,591	0/0:4,0:2:3.01:0,3,153	0/0:8,0:8:18.05:0,18,533	0/0:4,0:4:6.02:0,6,176	1/1:3,0:3:5.90:37,6,0	0/0:13,0:8:16.87:0,17,656	0/0:7,0:6:9.02:0,9,255	1/1:11,0:6:17.83:161,18,0	0/1:5,12:16:91.04:298,0,91	0/1:1,7:8:0.07:48,0,0	./.	0/0:8,0:7:15.05:0,15,522	0/0:3,0:2:6.02:0,6,195	0/0:8,0:8:18.04:0,18,483	1/1:15,0:10:29.60:192,30,0	1/1:10,2:11:6.94:247,7,0	0/0:8,0:5:15.05:0,15,513
chr10	93126150	.	C	CTGGGTTTCT	14600.15	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-0.875;DP=518;FS=2.232;HRun=0;HaplotypeScore=153.5051;InbreedingCoeff=0.9888;MQ=73.36;MQ0=2;MQRankSum=-13.947;QD=87.95;ReadPosRankSum=-2.185;VQSLOD=4.4930;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:81.25:0,81,2348	0/0:9,0:10:30.08:0,30,809	0/0:23,0:19:18.90:0,19,921	0/0:20,0:14:28.45:0,28,671	1/1:14,1:20:39.13:1088,39,0	0/0:22,0:22:57.02:0,57,1681	0/0:16,0:16:21.84:0,22,1297	0/0:27,0:27:69.22:0,69,2042	1/1:7,12:20:51.17:2115,51,0	1/1:8,7:15:33.11:1289,33,0	1/1:11,7:19:42.14:1500,42,0	0/0:20,0:20:60.21:0,60,1753	0/0:13,0:15:42.14:0,42,1166	0/0:25,0:25:72.24:0,72,2156	0/0:21,0:22:60.20:0,60,1835	1/1:0,6:7:21.07:1009,21,0	0/0:23,0:26:72.23:0,72,2106	0/0:12,0:12:36.12:0,36,1065	1/1:12,6:20:54.11:1930,54,0	1/1:6,5:15:30.02:1026,30,0	1/1:2,2:4:9.03:323,9,0	0/0:13,0:13:36.12:0,36,1044	0/0:15,0:16:45.15:0,45,1376	0/0:11,0:11:33.04:0,33,893	0/0:29,0:29:87.28:0,87,2492	1/1:10,12:24:48.11:2022,48,0	1/1:4,14:20:51.18:2298,51,0	0/0:16,0:16:48.10:0,48,1209
chr10	93126467	.	GGGGT	G	2346.08	PASS	AB=0.991;AC=37;AF=0.661;AN=56;BaseQRankSum=-3.725;DP=460;FS=0.554;HRun=0;HaplotypeScore=97.7033;InbreedingCoeff=0.2772;MQ=58.20;MQ0=4;MQRankSum=0.806;QD=5.95;ReadPosRankSum=2.066;VQSLOD=1.9935;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:2.99:0,3,24	1/1:8,0:8:14:70,14,0	0/1:15,0:8:5.51:6,0,283	0/0:14,0:9:18.05:0,18,272	1/1:13,0:12:3.70:50,4,0	1/1:22,0:22:41.66:194,42,0	1/1:18,2:20:28.94:182,29,0	1/1:18,0:18:42.89:250,43,0	0/1:13,0:13:2.94:22,0,3	0/1:16,0:16:14.45:22,0,14	0/1:7,0:6:9.47:40,0,9	1/1:19,1:20:27.40:169,27,0	0/1:20,2:22:14.96:112,0,15	1/1:17,0:17:33.59:159,34,0	0/1:22,0:22:0.71:75,0,1	0/0:10,0:10:10.19:0,10,29	1/1:35,1:34:12.58:240,13,0	1/1:16,0:16:28:134,28,0	0/1:13,0:12:31.89:89,0,32	0/1:8,0:8:4.79:5,0,71	0/1:20,0:20:15.30:15,0,59	1/1:16,0:16:20.30:106,20,0	1/1:14,1:14:11.09:90,11,0	1/1:24,2:25:42.36:277,42,0	1/1:15,0:14:17.15:76,17,0	1/1:16,0:16:15.84:137,16,0	0/0:15,0:15:19.27:0,19,91	0/0:3,0:3:2.04:0,2,6
chr10	93126468	.	GGGT	G	7159.88	PASS	AB=0.988;AC=48;AF=0.857;AN=56;BaseQRankSum=-2.631;DP=451;FS=1.024;HRun=0;HaplotypeScore=74.4803;InbreedingCoeff=0.4908;MQ=58.29;MQ0=4;MQRankSum=0.349;QD=16.97;ReadPosRankSum=3.465;VQSLOD=4.4587;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:23:0.02:0,0,0	1/1:1,7:8:14.95:202,15,0	0/0:15,0:8:11.45:0,11,237	0/0:14,0:9:17.90:0,18,203	1/1:12,1:12:19.24:132,19,0	1/1:2,20:22:45.11:654,45,0	1/1:4,16:20:30.03:405,30,0	1/1:3,14:17:43.47:490,43,0	1/1:11,1:12:10.40:81,10,0	1/1:15,1:16:23.99:167,24,0	1/1:5,0:4:7.24:52,7,0	1/1:4,15:19:29.82:410,30,0	1/1:5,16:21:24.01:346,24,0	1/1:0,17:17:36.12:541,36,0	1/1:5,17:22:24.06:366,24,0	1/1:11,0:11:11.98:42,12,0	1/1:5,31:34:62.37:810,62,0	1/1:1,15:16:30.10:451,30,0	1/1:13,0:12:25.03:163,25,0	0/1:8,0:8:8.38:32,0,8	0/1:19,1:20:7.33:68,0,7	1/1:1,14:15:21.07:305,21,0	1/1:3,11:13:11.87:164,12,0	1/1:5,20:25:45.13:640,45,0	1/1:1,14:14:18.06:274,18,0	1/1:15,1:16:37.61:310,38,0	0/1:14,0:14:3.04:45,0,3	1/1:3,0:3:2.37:8,2,0
chr10	93126469	.	GGT	G	5208.15	PASS	AB=0.535;AC=51;AF=0.911;AN=56;BaseQRankSum=-1.384;DP=434;FS=4.529;HRun=0;HaplotypeScore=73.8204;InbreedingCoeff=0.7526;MQ=58.73;MQ0=4;MQRankSum=1.071;QD=12.83;ReadPosRankSum=2.966;VQSLOD=4.0902;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:3,20:22:0.03:0,0,0	1/1:8,0:8:14.86:104,15,0	0/0:15,0:8:17.78:0,18,161	0/0:13,0:8:9.20:0,9,116	1/1:4,9:12:20.48:171,20,0	1/1:21,1:22:44.58:317,45,0	1/1:18,0:18:29.73:208,30,0	1/1:16,1:17:41.64:290,42,0	1/1:3,9:12:11.96:122,12,0	1/1:1,14:15:27.03:310,27,0	1/1:5,0:4:8.99:76,9,0	1/1:18,0:18:29.77:215,30,0	1/1:18,0:18:23.77:168,24,0	1/1:17,0:17:35.70:252,36,0	1/1:20,0:20:23.81:169,24,0	1/1:0,10:10:15.05:202,15,0	1/1:33,1:32:62.53:467,63,0	1/1:16,0:16:29.77:211,30,0	1/1:3,9:12:29.94:280,30,0	1/1:2,6:8:12:141,12,0	1/1:5,14:19:11.95:122,12,0	1/1:15,0:15:20.79:144,21,0	1/1:13,0:12:11.59:84,12,0	1/1:25,0:24:44.61:314,45,0	1/1:15,0:14:17.86:127,18,0	1/1:2,14:16:38.91:353,39,0	1/1:3,11:14:24.08:323,24,0	1/1:0,3:3:3.01:40,3,0
chr10	93126470	.	GT	G	3616.68	PASS	AB=0.958;AC=52;AF=0.929;AN=56;BaseQRankSum=-0.933;DP=431;FS=1.204;HRun=1;HaplotypeScore=73.3150;InbreedingCoeff=0.4994;MQ=57.40;MQ0=5;MQRankSum=-0.007;QD=8.69;ReadPosRankSum=3.046;VQSLOD=1.3087;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,2:21:0:0,0,0	1/1:7,0:8:14.45:81,14,0	0/0:14,1:8:6.59:0,7,140	0/1:13,0:7:8.05:8,0,72	1/1:12,1:12:20.34:119,20,0	1/1:21,0:22:42.94:228,43,0	1/1:18,0:18:28.91:160,29,0	1/1:17,0:17:37.94:238,38,0	1/1:11,0:11:12.16:70,12,0	1/1:15,0:15:26.49:174,26,0	1/1:6,0:5:8.99:76,9,0	1/1:16,1:18:28.84:156,29,0	1/1:18,0:18:22.91:121,23,0	1/1:17,0:17:34.58:187,35,0	1/1:17,1:20:23:122,23,0	1/1:10,0:10:14.70:94,15,0	1/1:34,0:32:60.88:344,61,0	1/1:16,0:16:28.85:158,29,0	1/1:11,2:12:29.65:211,30,0	1/1:7,0:7:11.74:71,12,0	1/1:17,0:17:12.63:71,13,0	1/1:14,0:15:19.94:113,20,0	1/1:13,0:12:11.13:60,11,0	1/1:25,0:24:43.26:237,43,0	1/1:15,0:14:17.25:92,17,0	1/1:15,1:16:38.43:267,38,0	1/1:12,2:14:23.45:142,23,0	1/1:3,0:3:2.92:17,3,0
chr10	93126911	.	TATC	T	20327.36	PASS	AB=0.957;AC=43;AF=0.768;AN=56;BaseQRankSum=9.923;DP=691;FS=5.134;HRun=0;HaplotypeScore=139.3477;InbreedingCoeff=0.8994;MQ=52.41;MQ0=4;MQRankSum=-2.582;QD=35.85;ReadPosRankSum=1.335;VQSLOD=5.3805;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,25:30:60.03:858,60,0	0/0:12,0:12:36.12:0,36,797	0/0:20,0:17:45.11:0,45,940	0/0:27,0:24:66.01:0,66,1338	1/1:6,20:25:63.20:993,63,0	1/1:2,27:29:57.19:926,57,0	1/1:3,15:18:30.10:487,30,0	1/1:8,15:19:30.07:419,30,0	1/1:6,16:22:60.18:928,60,0	1/1:3,34:37:99:1706,105,0	1/1:4,22:26:72.15:1015,72,0	1/1:1,19:20:36.12:573,36,0	1/1:2,21:23:63.21:982,63,0	1/1:1,26:27:72.25:1175,72,0	0/0:23,0:23:60.21:0,60,1286	1/1:3,25:28:78.23:1215,78,0	0/1:21,1:22:30.98:31,0,1162	0/0:31,0:31:87.30:0,87,1908	1/1:0,14:12:36.12:588,36,0	1/1:2,37:39:99:1583,105,0	1/1:2,25:25:63.08:906,63,0	1/1:3,27:30:66.13:987,66,0	1/1:3,24:27:69.15:1052,69,0	1/1:0,25:25:48.16:781,48,0	1/1:0,19:17:45.11:691,45,0	1/1:3,23:25:69.24:1124,69,0	1/1:2,26:28:81.27:1305,81,0	0/0:11,0:11:27.09:0,27,603
chr10	93126974	.	AT	A	5732.66	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-10.481;DP=591;FS=0.715;HRun=10;HaplotypeScore=147.2129;InbreedingCoeff=0.9852;MQ=51.43;MQ0=6;MQRankSum=0.179;QD=18.80;ReadPosRankSum=2.781;VQSLOD=3.6040;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:90.17:0,90,964	1/1:4,6:10:17.99:156,18,0	0/0:11,1:8:15.03:0,15,156	0/0:11,0:7:11.38:0,11,98	1/1:4,24:28:62.98:547,63,0	0/0:28,0:28:61.99:0,62,399	0/0:21,0:20:25.99:0,26,188	0/0:37,0:34:69.89:0,70,399	1/1:2,23:25:62.98:546,63,0	1/1:7,13:20:38.95:339,39,0	1/1:4,21:25:53.96:469,54,0	0/0:13,0:13:32.54:0,33,217	0/0:18,0:18:44.35:0,44,303	0/0:27,0:27:76.88:0,77,511	1/1:5,15:20:41.96:364,42,0	1/1:4,24:28:68.61:598,69,0	1/1:4,11:14:29.99:260,30,0	1/1:6,6:12:20.98:182,21,0	1/1:8,17:22:17.78:383,18,0	1/1:4,19:23:53.93:464,54,0	1/1:3,13:15:29.97:260,30,0	0/0:14,0:14:32.51:0,33,214	0/0:29,0:29:76.70:0,77,486	0/0:24,0:24:50.30:0,50,330	0/0:15,0:13:26.54:0,27,168	1/1:6,20:24:56.95:495,57,0	1/1:3,24:28:40.84:572,41,0	1/1:1,3:4:11.97:98,12,0
chr10	93127001	.	AC	A	928.62	PASS	AB=0.702;AC=8;AF=0.143;AN=56;BaseQRankSum=-0.723;DP=584;FS=5.659;HRun=3;HaplotypeScore=141.6046;InbreedingCoeff=0.3585;MQ=50.78;MQ0=15;MQRankSum=-6.198;QD=16.29;ReadPosRankSum=-0.110;VQSLOD=3.0787;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:96.28:0,96,1357	1/1:0,5:5:12.04:148,12,0	0/1:3,0:3:11.54:12,0,31	0/0:2,0:1:3.01:0,3,33	0/0:36,0:34:87.28:0,87,1233	0/0:32,0:31:63.21:0,63,895	0/0:14,0:12:20.94:0,21,253	0/0:26,0:24:66.14:0,66,869	0/0:28,0:28:60:0,60,846	0/0:16,0:16:42.13:0,42,578	0/0:33,0:33:81.27:0,81,1159	0/0:19,0:18:45.15:0,45,633	0/0:14,0:14:39.13:0,39,561	0/0:29,0:28:66.22:0,66,943	0/1:7,11:18:89.83:331,0,90	0/0:24,0:24:57.15:0,57,797	0/1:4,14:17:33.38:369,0,33	0/1:4,6:9:31.06:99,0,31	0/0:20,0:16:45.11:0,45,619	0/0:31,0:29:75.06:0,75,1006	0/0:18,0:16:45.07:0,45,620	0/0:19,0:19:39.13:0,39,561	0/0:26,0:26:69.13:0,69,947	0/0:30,0:29:57.19:0,57,799	0/0:14,0:13:20.96:0,21,275	0/0:33,0:29:84.25:0,84,1157	0/0:26,0:26:72.23:0,72,997	1/1:0,3:3:9.03:109,9,0
chr10	93128856	.	A	AG	13230.76	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-14.532;DP=597;FS=8.131;HRun=0;HaplotypeScore=55.1596;InbreedingCoeff=0.9992;MQ=80.31;MQ0=0;MQRankSum=-1.141;QD=43.81;ReadPosRankSum=1.663;VQSLOD=5.1124;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,1998	1/1:0,12:12:36.12:575,36,0	0/0:18,0:18:51.14:0,51,665	0/0:10,0:10:27.05:0,27,322	1/1:0,17:16:51.17:815,51,0	0/0:32,0:32:93.30:0,93,1283	0/0:21,0:21:63.21:0,63,879	0/0:21,0:21:63.21:0,63,866	1/1:0,16:16:45.15:719,45,0	1/1:0,22:22:66.19:1005,66,0	1/1:0,22:22:57.19:911,57,0	0/0:17,0:17:51.16:0,51,694	0/0:21,0:21:60.20:0,60,838	0/0:13,0:13:36.12:0,36,503	1/1:0,30:30:81.28:1294,81,0	1/1:0,18:18:45.15:719,45,0	1/1:2,24:26:33.46:1108,33,0	1/1:0,14:14:39.13:623,39,0	1/1:1,28:29:78.69:1277,79,0	1/1:0,17:17:48.10:737,48,0	1/1:0,21:21:57.19:910,57,0	0/0:23,0:23:66.20:0,66,903	0/0:16,0:16:48.13:0,48,651	0/0:24,0:24:72.24:0,72,1005	0/0:21,0:21:63.19:0,63,862	1/1:1,21:22:60.17:910,60,0	1/1:0,36:36:99:1628,102,0	0/0:8,0:8:21.07:0,21,294
chr10	93130803	.	C	CTG	177.02	PASS	AB=1.000;AC=17;AF=0.447;AN=38;BaseQRankSum=4.572;DP=187;FS=25.219;HRun=0;HaplotypeScore=38.0183;InbreedingCoeff=0.6060;MQ=79.93;MQ0=15;MQRankSum=0.695;QD=7.08;ReadPosRankSum=-4.823;VQSLOD=0.3870;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:38:99:0,105,1681	0/0:8,0:8:24.05:0,24,364	0/0:13,0:10:26.73:0,27,353	0/0:9,0:8:15.05:0,15,225	./.	0/0:1,0:1:3.01:0,3,36	./.	./.	1/1:5,0:3:5.98:47,6,0	./.	./.	0/0:2,0:2:2.84:0,3,49	0/1:3,0:1:0:0,0,0	1/1:1,0:1:3.01:35,3,0	0/0:21,0:21:60.19:0,60,966	1/1:1,4:4:3.01:53,3,0	0/0:27,0:27:81.23:0,81,1292	0/0:22,0:20:57.19:0,57,930	./.	1/1:1,0:1:3.01:38,3,0	./.	1/1:3,0:2:2.98:22,3,0	./.	1/1:3,0:2:3.01:38,3,0	1/1:2,0:1:2.98:22,3,0	./.	1/1:1,1:1:3.01:54,3,0	0/0:8,0:8:24.08:0,24,391
chr10	93132957	.	CTTG	C	7266.44	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.092;DP=587;FS=10.957;HRun=0;HaplotypeScore=89.0402;InbreedingCoeff=0.9997;MQ=89.98;MQ0=0;MQRankSum=-4.875;QD=35.62;ReadPosRankSum=1.538;VQSLOD=5.2862;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.24:0,69,1507	0/0:15,0:15:36.11:0,36,744	0/0:23,0:23:40.16:0,40,1016	0/0:28,0:27:28.81:0,29,1277	1/1:3,23:26:54.18:846,54,0	0/0:17,0:17:51.18:0,51,1108	0/0:21,0:21:54.19:0,54,1131	0/0:22,0:22:63.22:0,63,1340	1/1:3,22:25:57.19:902,57,0	1/1:5,15:20:45.15:713,45,0	1/1:3,12:15:30.10:475,30,0	0/0:16,0:16:48.16:0,48,1038	0/0:18,0:18:45.15:0,45,961	0/0:19,0:19:57.20:0,57,1239	0/0:27,0:27:72.25:0,72,1552	1/1:1,20:21:54.18:855,54,0	0/0:34,0:34:96.29:0,96,2032	0/0:17,0:17:42.14:0,42,918	1/1:3,11:14:33.08:478,33,0	1/1:1,19:20:51.13:771,51,0	1/1:3,23:26:44.66:712,45,0	0/0:19,0:19:51.18:0,51,1101	0/0:20,0:20:54.19:0,54,1155	0/0:25,0:25:66.23:0,66,1442	0/0:23,0:23:57.20:0,57,1219	1/1:4,16:20:51.17:800,51,0	1/1:1,16:17:45.15:713,45,0	0/0:16,0:16:45.15:0,45,982
chr10	93138636	.	GAGAGAGAA	G	5316.03	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-1.792;DP=505;FS=11.444;HRun=0;HaplotypeScore=115.5439;InbreedingCoeff=-0.1436;MQ=68.73;MQ0=39;MQRankSum=0.819;QD=13.81;ReadPosRankSum=4.908;VQSLOD=2.0253;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:27:66.62:0,67,567	1/1:5,0:5:14.96:120,15,0	0/0:33,0:21:28.34:0,28,367	0/0:39,0:17:21.02:0,21,260	0/1:17,0:16:57.23:164,0,57	0/1:25,0:23:1.32:313,0,1	0/1:19,0:18:13.85:210,0,14	1/1:21,0:20:52.02:468,52,0	0/1:14,0:12:74.76:159,0,75	0/1:17,0:15:48.33:255,0,48	1/1:3,0:3:5.99:48,6,0	0/1:14,0:12:14.35:169,0,14	1/1:10,0:9:16.78:136,17,0	1/1:21,0:21:51.40:421,51,0	1/1:23,0:23:5.97:87,6,0	0/1:11,0:10:42.07:143,0,42	1/1:17,0:16:41.76:341,42,0	1/1:7,0:7:20.80:148,21,0	0/1:14,0:13:83.54:190,0,84	0/1:28,0:26:40.67:342,0,41	0/1:28,0:25:99:366,0,136	0/0:4,14:17:0.22:0,0,1	0/1:11,0:11:43.48:146,0,43	0/1:26,0:26:99:324,0,121	0/1:17,0:15:12.68:212,0,13	0/1:20,0:18:55.82:335,0,56	1/1:11,0:10:23.93:189,24,0	0/1:6,0:4:31.89:32,0,74
chr10	93138642	.	GAA	G	7302.01	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-1.354;DP=521;FS=8.258;HRun=4;HaplotypeScore=75.3228;InbreedingCoeff=0.8731;MQ=79.99;MQ0=20;MQRankSum=-3.211;QD=18.77;ReadPosRankSum=2.866;VQSLOD=1.5502;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:72.57:0,73,616	1/1:5,0:5:14.96:120,15,0	0/0:41,0:29:45.18:0,45,547	0/0:45,0:23:30.16:0,30,373	1/1:17,0:17:41.54:338,42,0	1/1:25,0:23:50.37:409,50,0	1/1:14,0:14:35.90:296,36,0	1/1:25,0:24:65.92:581,66,0	1/1:14,0:13:19.21:206,19,0	1/1:15,0:15:41.96:375,42,0	1/1:7,0:7:14.95:118,15,0	1/1:15,0:15:38.19:320,38,0	1/1:11,0:10:23.84:187,24,0	1/1:24,0:24:65.90:542,66,0	1/1:23,0:23:5.94:44,6,0	1/1:11,0:11:23.51:191,24,0	1/1:21,0:21:56.88:460,57,0	1/1:7,0:7:20.85:153,21,0	1/1:12,4:16:41.45:336,41,0	1/1:27,0:26:59.76:483,60,0	1/1:28,0:26:57.15:459,57,0	0/0:16,0:16:1.02:0,1,3	1/1:9,0:9:23.95:199,24,0	1/1:26,0:26:62.89:513,63,0	1/1:17,0:17:28.61:331,29,0	1/1:18,0:17:44.86:386,45,0	1/1:11,0:11:26.92:213,27,0	1/1:2,0:2:5.95:44,6,0
chr10	93138979	.	AGT	A	24263.87	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.785;DP=734;FS=6.333;HRun=0;HaplotypeScore=127.9526;InbreedingCoeff=0.9937;MQ=86.57;MQ0=4;MQRankSum=-12.315;QD=36.88;ReadPosRankSum=7.976;VQSLOD=6.5949;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,43:48:99:1677,117,0	1/1:0,7:7:18.06:258,18,0	0/0:34,0:33:87.16:0,87,1427	0/0:42,0:40:99:0,102,1731	1/1:6,30:35:90.27:1201,90,0	1/1:1,23:24:57.19:817,57,0	1/1:1,16:17:42.14:602,42,0	1/1:2,15:17:45.15:643,45,0	1/1:0,22:22:66.22:945,66,0	1/1:6,20:25:72.23:999,72,0	1/1:3,14:17:48.12:643,48,0	1/1:2,23:25:69.18:964,69,0	1/1:0,28:28:81.27:1161,81,0	1/1:2,29:31:84.28:1200,84,0	1/1:0,32:32:84.28:1204,84,0	1/1:1,26:27:78.26:1116,78,0	1/1:0,36:36:99:1462,102,0	1/1:1,31:32:72.24:1032,72,0	1/1:9,9:17:42.05:558,42,0	1/1:3,26:29:81.25:1135,81,0	1/1:3,15:17:39.09:527,39,0	1/1:1,24:25:66.22:945,66,0	1/1:1,19:20:48.16:688,48,0	1/1:2,34:35:90.30:1290,90,0	1/1:2,26:28:72.17:1031,72,0	1/1:6,19:25:69.22:970,69,0	1/1:2,20:22:63.21:899,63,0	1/1:0,11:11:21.07:301,21,0
chr10	93139016	.	A	AG	10322.26	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=10.736;DP=707;FS=10.602;HRun=1;HaplotypeScore=157.3356;InbreedingCoeff=0.9991;MQ=83.59;MQ0=1;MQRankSum=-9.243;QD=40.32;ReadPosRankSum=-1.965;VQSLOD=2.3142;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,1656	0/0:9,0:9:24.08:0,24,308	0/0:31,0:31:86.08:0,86,1080	0/0:28,0:28:75.12:0,75,909	1/1:2,27:29:78.26:1148,78,0	0/0:21,0:21:54.18:0,54,701	0/0:21,0:21:60.19:0,60,774	0/0:29,0:29:81.26:0,81,1051	1/1:6,17:23:66.21:965,66,0	1/1:1,31:32:96.31:1416,96,0	1/1:3,20:23:54.17:776,54,0	0/0:22,0:22:66.21:0,66,857	0/0:18,0:18:51.17:0,51,662	0/0:23,0:23:66.19:0,66,857	0/0:35,0:35:96.31:0,96,1246	1/1:0,27:27:78.22:1142,78,0	0/0:32,0:32:89.88:0,90,1135	0/0:26,0:26:69.22:0,69,896	1/1:1,11:12:33.11:495,33,0	1/1:1,26:27:75.21:1096,75,0	1/1:2,20:21:45.11:626,45,0	0/0:20,0:20:60.20:0,60,779	0/0:19,0:19:54.17:0,54,697	0/0:36,0:35:99:0,102,1324	0/0:29,0:29:75.19:0,75,956	1/1:1,30:31:93.30:1371,93,0	1/1:1,29:29:87.29:1287,87,0	0/0:8,0:8:21.07:0,21,272
chr10	93140849	.	GA	G	9519.97	PASS	AB=0.593;AC=47;AF=0.839;AN=56;BaseQRankSum=7.236;DP=693;FS=4.026;HRun=12;HaplotypeScore=80.0591;InbreedingCoeff=0.8302;MQ=70.75;MQ0=0;MQRankSum=-0.615;QD=16.27;ReadPosRankSum=3.287;VQSLOD=5.9941;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:57,1:59:99:0,121,1372	1/1:1,4:5:8.96:70,9,0	0/0:26,0:19:17.96:0,18,165	0/0:11,0:11:10.66:0,11,87	1/1:5,16:21:11.35:271,11,0	1/1:6,15:24:44.94:319,45,0	1/1:5,20:26:49.82:377,50,0	1/1:9,20:31:57.80:425,58,0	1/1:8,24:33:65.56:513,66,0	1/1:6,25:31:19.79:518,20,0	1/1:3,14:18:43.84:329,44,0	1/1:4,13:19:33.95:244,34,0	1/1:4,17:21:44.80:348,45,0	1/1:4,17:23:48.88:360,49,0	1/1:2,24:27:67.78:516,68,0	1/1:8,21:30:61.78:470,62,0	1/1:3,21:24:53.79:418,54,0	0/1:5,11:16:76.94:211,0,77	1/1:6,17:23:47.77:369,48,0	1/1:8,17:25:26.32:386,26,0	1/1:5,19:26:53.99:405,54,0	1/1:2,31:33:83.64:650,84,0	1/1:0,14:14:41.84:325,42,0	1/1:2,31:35:93.49:697,93,0	1/1:3,17:20:23.34:364,23,0	1/1:9,22:33:42.53:492,43,0	1/1:5,22:27:56.74:441,57,0	0/0:12,0:12:33.07:0,33,335
chr10	93141579	.	T	TC	24433.85	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-9.181;DP=731;FS=4.170;HRun=3;HaplotypeScore=67.8604;InbreedingCoeff=0.9958;MQ=94.77;MQ0=0;MQRankSum=-11.855;QD=36.63;ReadPosRankSum=6.807;VQSLOD=4.7442;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:30:66.22:924,66,0	1/1:1,14:15:42.14:573,42,0	0/0:31,0:31:75.20:0,75,875	0/0:33,0:33:78.18:0,78,898	1/1:1,32:33:84.28:1164,84,0	1/1:1,24:25:60.20:836,60,0	1/1:3,29:32:84.28:1171,84,0	1/1:1,30:31:84.24:1123,84,0	1/1:1,24:25:66.22:924,66,0	1/1:2,26:28:78.26:1090,78,0	1/1:1,19:20:57.19:791,57,0	1/1:1,25:26:63.21:878,63,0	1/1:2,26:28:69.23:966,69,0	1/1:0,23:23:66.22:924,66,0	1/1:1,21:22:57.19:798,57,0	1/1:0,22:22:63.21:882,63,0	1/1:0,35:35:93.31:1302,93,0	1/1:0,15:15:39.13:546,39,0	1/1:2,22:24:66.19:886,66,0	1/1:1,32:33:93.31:1293,93,0	1/1:0,34:34:84.28:1176,84,0	1/1:1,19:20:57.19:797,57,0	1/1:1,20:21:60.20:840,60,0	1/1:2,24:26:69.23:966,69,0	1/1:1,16:17:42.14:588,42,0	1/1:1,32:34:96.29:1317,96,0	1/1:1,39:40:99:1428,102,0	1/1:1,7:8:18.06:252,18,0
chr10	93141700	.	A	AT	6185.08	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-12.133;DP=659;FS=8.128;HRun=9;HaplotypeScore=63.0733;InbreedingCoeff=0.9700;MQ=70.76;MQ0=0;MQRankSum=-1.203;QD=24.64;ReadPosRankSum=-0.788;VQSLOD=5.2026;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,132,1138	0/0:11,0:11:29.99:0,30,260	0/0:15,0:15:16.53:0,17,147	0/0:9,0:8:14.99:0,15,129	1/1:4,22:26:63.13:683,63,0	0/0:22,0:22:56.97:0,57,495	0/0:19,0:19:53.94:0,54,458	0/0:32,0:32:77.94:0,78,668	1/1:3,16:20:47.96:512,48,0	1/1:6,32:38:73.18:1019,73,0	1/1:5,12:17:4.03:273,4,0	0/0:23,0:23:62.97:0,63,544	0/0:30,0:30:50.67:0,51,595	0/0:17,0:17:47.95:0,48,408	0/0:34,0:34:92.97:0,93,807	1/1:2,23:25:57.15:631,57,0	0/0:32,0:32:86.97:0,87,755	0/0:23,0:23:62.93:0,63,540	1/1:4,17:21:51.09:537,51,0	1/1:3,21:26:62.96:663,63,0	1/1:5,8:13:18.05:199,18,0	0/0:16,0:16:35.97:0,36,313	0/0:30,0:30:77.95:0,78,674	0/0:18,0:18:50.97:0,51,439	0/0:23,0:24:68.01:0,68,576	1/1:10,18:28:57.14:618,57,0	1/1:6,31:37:96.23:1050,96,0	0/0:5,0:5:15:0,15,130
chr10	93142665	.	TATACATAC	T	6643.10	PASS	AB=0.903;AC=21;AF=0.404;AN=52;BaseQRankSum=3.298;DP=655;FS=2.275;HRun=0;HaplotypeScore=174.5390;InbreedingCoeff=0.9102;MQ=67.90;MQ0=8;MQRankSum=-5.995;QD=25.16;ReadPosRankSum=-4.101;VQSLOD=3.8623;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:37:35.92:0,36,312	0/0:7,0:7:9.03:0,9,340	./.	./.	1/1:12,10:21:27.09:519,27,0	0/0:18,0:17:27.09:0,27,1048	0/0:28,0:28:30.10:0,30,1103	1/1:32,13:45:39.06:509,39,0	1/1:11,10:21:21.07:524,21,0	1/1:6,11:17:39.12:901,39,0	1/1:6,7:13:24.08:588,24,0	0/0:22,0:22:33.11:0,33,1327	0/0:10,0:23:27.56:0,28,928	0/0:12,0:28:48.16:0,48,1604	0/0:28,0:28:33.11:0,33,1342	1/1:15,12:27:21.07:522,21,0	0/0:22,0:22:30.10:0,30,1166	0/0:23,0:23:39.13:0,39,1517	1/1:15,4:19:12:299,12,0	1/1:6,11:17:33.11:747,33,0	0/1:25,2:27:9.48:226,0,9	0/0:8,0:16:23.11:0,23,644	0/0:7,0:13:18.06:0,18,616	0/0:12,0:28:36.12:0,36,1267	0/0:23,0:23:45.15:0,45,1805	1/1:14,17:31:51.17:1211,51,0	1/1:14,10:24:23.88:597,24,0	0/0:15,0:15:24.08:0,24,977
chr10	93143304	.	GCTTTTACC	G	12693.13	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=11.537;DP=579;FS=9.250;HRun=0;HaplotypeScore=169.8866;InbreedingCoeff=0.9608;MQ=83.11;MQ0=0;MQRankSum=-14.106;QD=37.55;ReadPosRankSum=2.712;VQSLOD=4.2214;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:93.31:0,93,3764	0/0:10,0:10:18.05:0,18,556	0/0:27,0:27:45.23:0,45,1135	0/0:30,0:30:24.08:0,24,823	1/1:9,11:20:12.04:308,12,0	0/0:23,0:23:51.18:0,51,2050	0/0:25,0:25:54.19:0,54,2156	1/1:18,4:22:9:128,9,0	1/1:5,17:22:39.13:1000,39,0	1/1:7,9:16:33.09:726,33,0	1/1:5,10:15:24.08:615,24,0	1/1:2,15:17:39.13:1000,39,0	1/1:4,17:21:45.15:1154,45,0	1/1:9,9:18:21.07:538,21,0	0/0:28,0:28:54.19:0,54,1890	1/1:4,17:21:48.16:1230,48,0	0/0:24,0:24:60.21:0,60,2048	0/0:24,0:24:60.14:0,60,1875	1/1:12,10:23:26.83:632,27,0	1/1:4,14:18:27.09:653,27,0	1/1:7,7:14:12.04:308,12,0	1/1:4,14:18:30.10:769,30,0	1/1:7,9:16:21.07:538,21,0	1/1:11,6:17:5.50:153,6,0	1/1:6,9:15:21.07:538,21,0	1/1:6,11:17:33.11:846,33,0	1/1:5,23:28:63.17:1558,63,0	0/0:10,0:10:21.07:0,21,860
chr10	93145142	.	CTT	C	5132.08	PASS	AB=0.609;AC=39;AF=0.696;AN=56;BaseQRankSum=-3.290;DP=428;FS=0.000;HRun=13;HaplotypeScore=86.0236;InbreedingCoeff=0.8875;MQ=70.14;MQ0=1;MQRankSum=0.378;QD=16.24;ReadPosRankSum=6.106;VQSLOD=3.8917;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,33:41:84.02:864,84,0	0/0:4,0:4:9.03:0,9,124	0/0:22,0:18:27.56:0,28,262	0/0:13,0:9:11.98:0,12,136	1/1:3,14:17:42.05:407,42,0	0/0:3,0:12:33.06:0,33,333	0/0:14,0:21:60.06:0,60,667	1/1:11,10:24:27.66:303,28,0	1/1:2,6:7:8.97:87,9,0	1/1:6,10:17:32.75:303,33,0	1/1:3,3:6:8.98:87,9,0	1/1:4,16:20:35.94:349,36,0	0/1:5,8:14:1.70:176,0,2	1/1:5,8:13:17.98:175,18,0	0/0:8,0:11:30.04:0,30,342	1/1:4,15:19:32.71:319,33,0	0/0:7,0:15:33.07:0,33,350	0/0:9,0:13:39.10:0,39,453	1/1:7,6:15:8.58:169,9,0	1/1:4,11:15:26.95:262,27,0	1/1:10,8:20:11.59:198,12,0	1/1:1,13:14:33.01:320,33,0	1/1:5,6:12:14.68:128,15,0	1/1:7,10:18:29.76:274,30,0	1/1:1,10:12:26.77:245,27,0	1/1:6,11:17:17.85:174,18,0	1/1:4,5:9:17.99:174,18,0	1/1:0,5:5:12.02:116,12,0
chr10	93145199	.	GGAGGAGGAA	G	4231.14	PASS	AB=0.976;AC=40;AF=0.714;AN=56;BaseQRankSum=-1.586;DP=324;FS=1.666;HRun=0;HaplotypeScore=103.4433;InbreedingCoeff=-0.0252;MQ=34.06;MQ0=37;MQRankSum=1.966;QD=16.21;ReadPosRankSum=-0.628;VQSLOD=3.4233;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:45,0:42:53.78:687,54,0	1/1:3,0:2:2.94:18,3,0	0/0:31,0:3:2.06:0,2,33	0/0:29,0:1:3.01:0,3,30	0/1:9,0:6:1.40:42,0,1	0/1:13,0:11:47.03:47,0,121	0/1:12,0:11:30.81:114,0,31	1/1:8,0:5:5.91:40,6,0	1/1:5,0:4:9.79:65,10,0	0/1:15,0:12:37.01:160,0,37	0/1:6,0:6:2.33:73,0,2	1/1:6,4:9:14.17:378,14,0	1/1:3,1:3:8.95:133,9,0	1/1:6,1:6:11.97:177,12,0	1/1:4,1:4:6:113,6,0	0/1:7,0:7:2.19:29,0,2	0/1:9,0:8:12.39:158,0,12	0/1:11,5:16:19.42:519,0,19	0/1:10,0:7:9.98:90,0,10	0/0:2,0:1:2.90:0,3,16	0/1:19,0:17:60.51:144,0,61	1/1:10,1:8:14:173,14,0	1/1:4,2:4:8.95:97,9,0	1/1:14,4:16:17.40:405,17,0	1/1:8,1:9:14.81:194,15,0	1/1:8,0:8:17.67:159,18,0	1/1:2,0:2:5.93:40,6,0	1/1:2,2:3:6.02:178,6,0
chr10	93145201	.	AG	A	242.44	PASS	AB=0.924;AC=6;AF=0.107;AN=56;BaseQRankSum=6.424;DP=319;FS=2.401;HRun=2;HaplotypeScore=85.5903;InbreedingCoeff=0.1023;MQ=36.65;MQ0=37;MQRankSum=-4.796;QD=3.03;ReadPosRankSum=2.534;VQSLOD=0.2690;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:30,10:38:99:311,0,282	0/0:3,0:2:3.01:0,3,41	0/0:29,0:3:9.03:0,9,120	0/0:31,0:2:3.01:0,3,41	0/0:8,0:5:8.41:0,8,93	0/0:13,0:11:25.68:0,26,220	0/0:11,0:10:26.50:0,27,285	0/0:8,0:5:7.38:0,7,83	0/0:5,0:4:6.95:0,7,69	0/0:15,0:12:28.50:0,29,367	0/0:6,0:6:12.50:0,12,137	0/1:9,0:9:6.04:13,0,6	0/0:4,0:3:3.18:0,3,77	0/1:7,0:6:2.82:3,0,71	0/0:4,0:3:0.14:0,0,36	0/0:7,0:7:9.78:0,10,75	0/0:8,0:7:15.04:0,15,202	0/1:18,0:18:0.44:0,0,329	0/0:10,0:7:8.15:0,8,190	0/0:3,0:2:3.01:0,3,40	0/0:20,0:18:38.15:0,38,465	0/0:11,0:8:11.88:0,12,167	0/0:6,0:4:3.15:0,3,55	0/0:18,0:16:17.34:0,17,268	0/0:9,0:9:15.85:0,16,192	0/0:8,0:8:21.38:0,21,228	0/0:2,0:2:1.36:0,1,3	1/1:4,0:3:3.85:10,4,0
chr10	93145202	.	GGAGGAA	G	4356.95	PASS	AB=0.813;AC=50;AF=0.893;AN=56;BaseQRankSum=-1.078;DP=317;FS=2.158;HRun=0;HaplotypeScore=87.6093;InbreedingCoeff=0.2456;MQ=36.39;MQ0=37;MQRankSum=0.548;QD=17.15;ReadPosRankSum=0.371;VQSLOD=4.3239;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:37:10.97:509,11,0	1/1:2,0:1:2.94:18,3,0	0/0:32,0:3:2.06:0,2,33	0/0:31,0:2:5.04:0,5,36	1/1:8,0:5:9.47:89,9,0	1/1:13,0:11:20:95,20,0	1/1:10,0:9:22.87:146,23,0	1/1:7,0:4:5.93:40,6,0	1/1:3,2:4:4.18:155,4,0	1/1:13,2:12:32.98:416,33,0	1/1:5,1:6:14.97:164,15,0	1/1:9,0:8:11.22:194,11,0	1/1:4,0:3:8.95:93,9,0	1/1:5,0:5:11.92:112,12,0	1/1:4,0:3:6:73,6,0	1/1:4,2:6:9.03:176,9,0	1/1:6,0:7:11.67:130,12,0	0/1:18,0:18:13.35:378,0,13	0/1:4,6:7:9.82:142,0,10	1/1:3,0:2:5.96:44,6,0	1/1:20,1:19:31.45:249,31,0	1/1:11,0:8:14.56:135,15,0	1/1:6,0:4:8.81:57,9,0	1/1:16,0:16:5.71:279,6,0	1/1:10,0:10:23.78:194,24,0	1/1:7,1:8:21.01:235,21,0	1/1:0,2:2:6.02:136,6,0	1/1:4,0:3:6.02:98,6,0
chr10	93145205	.	GGAA	G	3831.82	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-1.276;DP=316;FS=2.203;HRun=0;HaplotypeScore=79.6397;InbreedingCoeff=0.3240;MQ=36.87;MQ0=34;MQRankSum=-0.201;QD=15.09;ReadPosRankSum=2.191;VQSLOD=3.3207;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:37:0.33:409,0,0	1/1:2,0:1:2.94:18,3,0	0/0:31,0:3:2.06:0,2,33	0/0:30,0:2:5.04:0,5,36	1/1:8,0:5:7.55:54,8,0	1/1:7,5:11:26.84:325,27,0	1/1:10,2:11:29.75:264,30,0	1/1:7,0:4:6.41:41,6,0	1/1:6,0:5:10.92:102,11,0	1/1:15,1:13:35.97:326,36,0	1/1:6,0:6:14.96:124,15,0	1/1:7,0:6:10.11:108,10,0	1/1:3,0:3:8.94:72,9,0	1/1:6,0:5:11.91:91,12,0	1/1:4,0:3:8.99:77,9,0	1/1:5,0:5:10.25:86,10,0	1/1:8,0:7:14.46:125,14,0	1/1:15,1:17:10.77:288,11,0	0/1:10,0:7:9.53:102,0,10	1/1:3,0:2:5.96:44,6,0	1/1:20,0:18:34.76:275,35,0	1/1:11,0:8:14.52:114,15,0	1/1:7,0:5:8.44:66,8,0	1/1:19,0:17:18.36:229,18,0	1/1:10,0:10:22.99:160,23,0	1/1:8,0:8:21.49:196,21,0	1/1:3,0:3:8.99:79,9,0	1/1:4,0:3:6.01:57,6,0
chr10	93145699	.	CTG	C	8483.88	PASS	AB=0.940;AC=27;AF=0.482;AN=56;BaseQRankSum=7.158;DP=801;FS=0.305;HRun=0;HaplotypeScore=115.7384;InbreedingCoeff=0.8051;MQ=64.35;MQ0=5;MQRankSum=0.467;QD=20.15;ReadPosRankSum=2.468;VQSLOD=4.9899;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,42:54:99:1356,111,0	0/1:5,0:15:0.71:1,0,114	0/0:33,1:23:17.47:0,17,667	0/0:35,0:32:50.20:0,50,621	0/0:20,0:20:42.09:0,42,584	1/1:10,21:31:63.19:758,63,0	1/1:8,15:25:38.95:454,39,0	1/1:12,13:20:30.08:355,30,0	0/0:23,0:23:57.16:0,57,870	0/0:41,0:41:62.91:0,63,1580	0/0:25,1:26:29.56:0,30,944	1/1:4,28:32:75.23:916,75,0	1/1:2,29:31:72.23:878,72,0	1/1:5,26:32:78.07:926,78,0	0/0:7,0:32:62.98:0,63,553	0/0:23,3:25:1.84:0,2,734	0/0:9,0:32:56.98:0,57,499	0/0:4,0:26:38.96:0,39,337	0/0:22,0:21:44.82:0,45,680	0/1:13,1:15:17.63:18,0,385	0/1:41,3:44:0.83:1,0,1415	1/1:6,22:29:5.29:551,5,0	1/1:3,19:22:42.13:513,42,0	1/1:2,24:26:62.56:740,63,0	1/1:2,23:26:60.02:710,60,0	0/0:36,0:37:58.09:0,58,1143	0/0:25,1:26:29.55:0,30,951	1/1:5,8:14:26.92:307,27,0
chr10	93146922	.	CATTGATG	C	953.42	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.611;DP=749;FS=2.876;HRun=0;HaplotypeScore=183.4572;InbreedingCoeff=0.9915;MQ=90.51;MQ0=0;MQRankSum=-7.059;QD=23.25;ReadPosRankSum=-1.307;VQSLOD=3.3858;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:44.72:837,45,0	0/0:17,0:17:51.08:0,51,1594	0/0:30,0:30:90.27:0,90,2880	0/0:28,0:28:66.77:0,67,2084	0/0:26,0:26:78.24:0,78,2954	0/0:25,0:25:75.18:0,75,2155	0/0:28,0:28:84.24:0,84,2868	0/0:19,0:19:57.16:0,57,1793	0/0:38,0:38:99:0,108,4065	0/0:31,0:31:87.27:0,87,3047	0/0:23,0:23:66.20:0,66,2440	0/0:24,0:24:72.20:0,72,2550	0/0:18,0:18:54.16:0,54,1943	0/0:24,0:24:69.21:0,69,2544	0/0:32,0:32:96.26:0,96,3374	0/0:31,0:31:93.26:0,93,3226	0/0:21,0:21:60.16:0,60,2161	0/0:20,0:20:60.15:0,60,2148	0/0:24,0:24:72.15:0,72,2059	0/0:37,0:37:99:0,108,3871	0/0:48,0:48:99:0,144,4879	0/0:15,0:15:45.14:0,45,1595	0/0:28,0:28:78.25:0,78,3048	0/0:32,0:32:96.27:0,96,3374	0/0:30,0:30:90.19:0,90,2851	0/0:27,0:27:78.23:0,78,2728	0/0:32,0:31:93.26:0,93,3309	1/1:0,7:7:14.93:235,15,0
chr10	93147736	.	TA	T	7338.68	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.466;DP=591;FS=0.000;HRun=10;HaplotypeScore=91.2649;InbreedingCoeff=0.9655;MQ=78.01;MQ0=4;MQRankSum=-7.805;QD=13.47;ReadPosRankSum=5.137;VQSLOD=4.8406;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:31:80.98:703,81,0	1/1:0,0:16:25.39:73,25,0	0/0:22,0:20:46.85:0,47,442	0/0:23,1:21:20.84:0,21,357	1/1:2,20:22:56.98:495,57,0	1/1:1,14:15:38.98:338,39,0	1/1:2,19:21:50.99:443,51,0	1/1:3,0:27:47.32:139,47,0	1/1:1,13:14:35.99:313,36,0	1/1:4,17:21:50.88:433,51,0	1/1:4,24:28:71.94:618,72,0	1/1:2,0:21:30.55:90,31,0	1/1:2,0:16:28.52:84,29,0	1/1:1,0:24:34.63:102,35,0	1/1:2,0:21:36.67:108,37,0	1/1:5,17:22:44.99:391,45,0	1/1:3,0:25:38.70:114,39,0	1/1:1,0:17:30.55:90,31,0	1/1:1,15:16:44.93:377,45,0	1/1:3,12:15:35.99:312,36,0	1/1:2,21:23:50.98:442,51,0	1/1:2,0:20:34.63:102,35,0	1/1:0,0:27:48.68:143,49,0	1/1:0,0:36:55.06:162,55,0	1/1:0,0:12:24.44:72,24,0	1/1:1,24:25:71.97:622,72,0	1/1:2,20:22:56.99:495,57,0	1/1:1,3:4:9:78,9,0
chr10	93148205	.	AG	A	3508.35	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.681;DP=592;FS=7.995;HRun=1;HaplotypeScore=66.2027;InbreedingCoeff=0.9965;MQ=89.27;MQ0=0;MQRankSum=-2.844;QD=36.55;ReadPosRankSum=0.817;VQSLOD=3.8046;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:40:99:1424,102,0	0/0:8,0:8:24.08:0,24,383	0/0:24,0:24:42.08:0,42,895	0/0:19,0:19:57.08:0,57,816	0/0:18,0:18:51.17:0,51,806	1/1:0,17:17:48.16:671,48,0	1/1:1,29:30:84.28:1162,84,0	0/0:32,0:32:93.29:0,93,1402	0/0:15,0:15:45.14:0,45,694	0/0:35,0:35:99:0,99,1562	0/0:8,0:8:24.08:0,24,382	0/0:18,0:18:54.17:0,54,840	0/0:20,0:20:60.16:0,60,888	0/0:21,0:21:63.17:0,63,957	0/0:21,0:21:63.20:0,63,982	0/0:19,0:19:57.18:0,57,888	0/0:30,0:30:90.29:0,90,1398	0/0:20,0:20:60.19:0,60,925	0/0:18,0:18:54.18:0,54,859	0/0:11,0:11:33.11:0,33,524	0/0:41,0:41:99:0,120,1862	0/0:14,0:14:42.14:0,42,666	0/0:16,0:16:45.05:0,45,615	0/0:28,0:28:84.27:0,84,1318	0/0:16,0:16:48.15:0,48,739	0/0:21,0:21:63.21:0,63,1007	0/0:23,0:23:69.18:0,69,1016	1/1:0,9:9:18.06:252,18,0
chr10	93148934	.	TAC	T	738.76	PASS	AB=1.000;AC=19;AF=0.396;AN=48;BaseQRankSum=0.117;DP=307;FS=2.930;HRun=0;HaplotypeScore=77.0216;InbreedingCoeff=0.8142;MQ=81.83;MQ0=16;MQRankSum=-1.249;QD=8.30;ReadPosRankSum=0.354;VQSLOD=3.2410;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:14.95:0,15,116	./.	0/0:32,0:19:44.97:0,45,398	0/0:47,0:21:41.12:0,41,405	0/0:8,0:8:17.96:0,18,146	0/0:10,0:9:10.81:0,11,80	./.	1/1:19,0:17:15.85:272,16,0	0/0:7,0:7:6.10:0,6,31	0/0:18,0:18:40.59:0,41,337	./.	./.	0/1:9,0:9:0:0,0,0	1/1:7,0:7:14.66:122,15,0	1/1:9,0:9:14.97:120,15,0	0/0:13,0:13:25.40:0,25,189	1/1:12,0:12:8.86:61,9,0	1/1:1,0:4:3.85:22,4,0	0/0:11,0:10:25.96:0,26,211	0/0:5,0:5:5.99:0,6,49	0/0:17,0:17:32.94:0,33,274	1/1:8,0:8:11.95:95,12,0	1/1:2,3:4:3:25,3,0	1/1:2,6:8:5.99:49,6,0	1/1:8,0:8:17.98:149,18,0	0/0:8,0:8:24:0,24,213	0/0:6,0:6:8.39:0,8,49	0/0:9,0:8:17.84:0,18,136
chr10	93148937	.	ACACACTCTCTCTCTCTCT	A	1689.93	PASS	AB=0.935;AC=15;AF=0.300;AN=50;BaseQRankSum=4.545;DP=297;FS=19.955;HRun=0;HaplotypeScore=131.2079;InbreedingCoeff=0.1555;MQ=82.10;MQ0=16;MQRankSum=-2.969;QD=16.25;ReadPosRankSum=0.888;VQSLOD=1.4337;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:15.05:0,15,500	./.	0/0:32,0:19:44.73:0,45,814	0/0:46,0:20:45.68:0,46,797	0/0:8,0:8:18.06:0,18,291	0/1:10,0:9:17.18:17,0,160	0/0:11,0:11:2.99:0,3,24	0/1:3,16:17:34.35:636,0,34	0/1:7,0:7:38.93:172,0,39	0/1:17,0:17:64.38:64,0,574	./.	./.	0/0:9,0:9:4.60:0,5,29	0/0:6,0:6:2.91:0,3,66	1/1:8,0:8:15.05:246,15,0	0/1:13,0:13:40.29:40,0,338	1/1:7,0:9:9.50:162,10,0	1/1:3,0:4:6.02:280,6,0	0/0:11,0:10:29.93:0,30,457	0/0:5,0:5:6.02:0,6,89	0/0:17,0:17:33.54:0,34,543	0/0:8,0:8:1.77:0,2,23	1/1:4,0:3:3.01:50,3,0	0/1:7,0:7:11.05:32,0,11	0/0:7,0:7:15:0,15,506	0/0:8,0:8:24.08:0,24,447	0/1:6,0:6:97.81:144,0,98	0/0:9,0:8:18.06:0,18,304
chr10	93148939	.	ACACTCTCTCTCTCTCT	A	1539.24	PASS	AB=1.000;AC=21;AF=0.438;AN=48;BaseQRankSum=3.095;DP=291;FS=12.498;HRun=0;HaplotypeScore=119.4447;InbreedingCoeff=0.2579;MQ=80.90;MQ0=18;MQRankSum=-2.575;QD=12.51;ReadPosRankSum=2.252;VQSLOD=1.5122;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:15.01:0,15,355	./.	0/0:30,0:17:44.63:0,45,385	0/0:46,0:20:41.64:0,42,408	0/0:8,0:8:14.97:0,15,121	0/1:10,0:9:39.06:39,0,65	./.	0/1:19,0:17:6.74:263,0,7	0/1:6,0:6:14.97:180,0,15	0/1:17,0:17:68.66:69,0,266	./.	./.	0/0:1,7:8:1.71:0,2,5	1/1:6,0:6:12.18:97,12,0	1/1:8,0:8:14.97:120,15,0	0/1:13,0:13:90.85:91,0,137	1/1:8,0:8:9.41:85,9,0	1/1:4,0:4:6.02:221,6,0	0/0:11,0:10:4.97:0,5,162	0/0:5,0:5:5.99:0,6,49	0/0:17,0:17:6.98:0,7,202	1/1:8,0:8:11.95:95,12,0	1/1:4,0:3:3.01:50,3,0	1/1:7,0:6:6.02:135,6,0	0/1:8,0:7:57.58:58,0,308	0/0:8,0:8:20.49:0,20,186	0/1:5,0:5:30.95:201,0,31	0/0:9,0:8:17.38:0,17,150
chr10	93148941	.	ACTCTCTCTCT	A	586.42	PASS	AB=1.000;AC=23;AF=0.639;AN=36;BaseQRankSum=3.440;DP=292;FS=6.368;HRun=0;HaplotypeScore=100.7758;InbreedingCoeff=0.3745;MQ=77.84;MQ0=22;MQRankSum=-1.847;QD=4.93;ReadPosRankSum=1.340;VQSLOD=0.7111;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,2:9:3.01:0,3,50	./.	./.	0/0:45,0:19:1.72:0,2,4	./.	1/1:8,0:9:3.48:52,3,0	./.	0/0:20,0:17:1.03:0,1,2	1/1:4,0:6:6.02:140,6,0	1/1:13,0:16:3.01:73,3,0	./.	./.	0/0:8,0:8:0.89:0,1,2	1/1:7,0:6:3.01:33,3,0	./.	1/1:11,0:13:3.01:70,3,0	1/1:8,0:8:0.89:2,1,0	1/1:4,0:4:6.02:136,6,0	0/1:11,0:10:0:0,0,0	./.	0/1:18,0:17:0:0,0,0	./.	0/1:4,0:3:0:0,0,0	1/1:7,0:6:0.94:2,1,0	0/0:10,0:9:9.02:0,9,175	./.	1/1:4,0:5:6.02:153,6,0	1/1:10,0:8:2.99:24,3,0
chr10	93148999	.	TATATATATATATAAATAA	T	127.21	PASS	AB=1.000;AC=6;AF=0.176;AN=34;BaseQRankSum=2.562;DP=148;FS=0.000;HRun=0;HaplotypeScore=84.8858;InbreedingCoeff=-0.0807;MQ=81.16;MQ0=12;MQRankSum=0.154;QD=1.50;ReadPosRankSum=0.263;VQSLOD=1.4489;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:7:2.97:0,3,20	0/0:2,0:1:2.92:0,3,17	0/1:14,0:5:24.20:24,0,73	0/1:49,0:28:20.16:20,0,130	0/0:1,0:1:3.01:0,3,196	1/1:5,0:5:3.01:113,3,0	./.	0/0:15,0:11:25.02:0,25,546	0/0:3,0:3:9.03:0,9,164	0/0:4,0:4:8.86:0,9,254	./.	./.	./.	./.	./.	0/0:4,0:4:9.03:0,9,294	0/0:9,0:9:3.48:0,3,62	0/1:9,0:7:6.57:7,0,365	0/0:2,0:2:6.02:0,6,286	./.	./.	./.	./.	./.	0/0:2,0:2:6.01:0,6,77	0/0:2,0:2:6.02:0,6,341	0/1:8,0:8:64.72:65,0,522	0/0:4,0:3:6.02:0,6,326
chr10	93149001	.	TATATATATATAA	T	304.59	PASS	AB=1.000;AC=11;AF=0.344;AN=32;BaseQRankSum=-0.994;DP=151;FS=5.099;HRun=0;HaplotypeScore=75.3426;InbreedingCoeff=0.0509;MQ=85.64;MQ0=12;MQRankSum=0.965;QD=2.67;ReadPosRankSum=-1.391;VQSLOD=1.1728;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:2,0:1:0:0,0,0	0/1:14,0:5:4.23:4,0,12	0/1:51,0:30:37.69:38,0,63	0/0:1,0:1:3.01:0,3,112	1/1:2,0:5:3.01:61,3,0	./.	0/1:15,0:11:34.92:143,0,35	0/0:3,0:3:8.99:0,9,98	0/0:4,0:4:7.83:0,8,108	./.	./.	./.	./.	./.	0/0:4,0:4:8.85:0,9,114	1/1:9,0:9:1.91:7,2,0	0/1:9,0:7:50.07:50,0,199	0/0:2,0:2:6.02:0,6,128	./.	./.	./.	./.	./.	1/1:3,0:3:8.96:70,9,0	0/0:2,0:2:6.02:0,6,178	0/1:8,0:8:42.74:43,0,285	0/0:4,0:3:6.02:0,6,134
chr10	93149007	.	TATATAA	T	417.08	PASS	AB=1.000;AC=13;AF=0.433;AN=30;BaseQRankSum=-1.749;DP=151;FS=4.987;HRun=0;HaplotypeScore=66.7527;InbreedingCoeff=0.1423;MQ=88.68;MQ0=11;MQRankSum=1.687;QD=3.39;ReadPosRankSum=-0.245;VQSLOD=1.1271;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:16,0:6:3.38:3,0,15	0/1:53,0:31:25.74:26,0,63	0/0:1,0:1:3.01:0,3,37	1/1:3,0:3:2.97:20,3,0	./.	1/1:5,11:12:28.21:227,28,0	0/0:3,0:3:8.98:0,9,79	0/1:3,0:3:21.98:23,0,22	./.	./.	./.	./.	./.	0/0:3,0:3:7.56:0,8,60	1/1:10,0:10:2.41:60,2,0	0/1:10,0:8:50.98:51,0,77	0/0:3,0:3:9.01:0,9,83	./.	./.	./.	./.	./.	1/1:5,0:5:14.95:120,15,0	0/0:2,0:2:6:0,6,54	0/1:7,0:7:6.31:6,0,83	0/0:3,0:2:6.02:0,6,76
chr10	93149013	.	AAT	A	244.64	PASS	AB=1.000;AC=11;AF=0.367;AN=30;BaseQRankSum=0.584;DP=155;FS=8.827;HRun=0;HaplotypeScore=60.7990;InbreedingCoeff=0.3699;MQ=90.44;MQ0=9;MQRankSum=-0.900;QD=2.40;ReadPosRankSum=-0.306;VQSLOD=0.4975;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:17,0:6:7.77:0,8,60	0/1:57,0:32:8.82:9,0,122	0/0:1,0:1:2.68:0,3,11	0/1:3,0:3:0:0,0,0	./.	1/1:12,0:9:1.36:3,1,0	0/0:3,0:3:9.02:0,9,104	0/1:2,0:2:5.09:5,0,47	./.	./.	./.	./.	./.	0/0:2,0:2:6.02:0,6,104	1/1:1,11:12:2.99:44,3,0	1/1:10,1:9:26.01:283,26,0	0/0:6,0:6:12.98:0,13,196	./.	./.	./.	./.	./.	1/1:5,0:5:1.55:4,2,0	0/0:2,0:2:6.02:0,6,103	0/0:7,0:7:19.98:0,20,175	0/0:3,0:3:5.88:0,6,38
chr10	93150871	.	CTGT	C	480.50	PASS	AB=0.975;AC=22;AF=0.393;AN=56;BaseQRankSum=5.537;DP=495;FS=2.500;HRun=0;HaplotypeScore=136.5386;InbreedingCoeff=-0.4574;MQ=57.29;MQ0=6;MQRankSum=2.676;QD=1.37;ReadPosRankSum=8.158;VQSLOD=1.6181;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:35:39.24:0,39,475	0/1:8,2:10:10.12:40,0,10	0/0:30,0:18:54.18:0,54,932	0/0:27,0:21:57.19:0,57,1090	0/1:18,0:18:9.29:9,0,52	0/0:24,0:24:35.80:0,36,295	0/1:13,0:13:15.38:15,0,48	0/1:26,0:26:98.26:98,0,111	0/1:10,1:11:8.96:43,0,9	0/1:14,0:12:6.76:103,0,7	0/1:7,1:8:5.46:5,0,26	0/1:10,0:10:7.35:7,0,30	0/1:11,0:11:10.62:28,0,11	0/1:15,0:15:29.16:29,0,46	0/1:23,1:24:45.50:46,0,47	0/1:15,1:16:9.81:10,0,65	0/1:24,1:24:10.89:11,0,141	0/1:25,0:24:12.40:12,0,120	0/1:11,0:10:13.18:13,0,26	0/1:16,0:15:9.15:9,0,45	0/1:21,0:19:19.23:19,0,35	0/1:14,0:14:26.94:27,0,38	0/0:6,0:5:1.50:0,1,22	0/1:30,0:30:26.28:26,0,62	0/0:12,0:11:2.92:0,3,17	0/1:19,0:18:42.01:42,0,90	1/1:15,0:14:7.98:41,8,0	0/0:6,0:6:17.99:0,18,247
chr10	93150881	.	GTC	G	4350.32	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=1.281;DP=497;FS=7.398;HRun=0;HaplotypeScore=121.9698;InbreedingCoeff=0.5048;MQ=50.26;MQ0=9;MQRankSum=-1.383;QD=11.13;ReadPosRankSum=5.700;VQSLOD=3.6013;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:36:33.82:0,34,259	1/1:10,0:10:25.78:203,26,0	0/0:23,0:12:29.87:0,30,254	0/0:24,0:18:39.98:0,40,383	0/1:13,0:13:1.11:118,0,1	1/1:23,0:23:11.93:92,12,0	1/1:18,0:18:16.37:141,16,0	1/1:26,0:26:53.56:453,54,0	1/1:10,0:10:9.20:197,9,0	1/1:16,0:13:29.12:279,29,0	1/1:6,0:6:5.95:44,6,0	0/1:14,0:14:6.16:74,0,6	0/1:19,0:19:28.38:137,0,28	0/1:21,0:21:12.59:158,0,13	1/1:17,0:17:32.95:272,33,0	1/1:10,0:10:7.88:128,8,0	1/1:27,0:26:25.55:283,26,0	1/1:27,0:26:20.36:376,20,0	1/1:15,0:13:16.55:146,17,0	1/1:16,0:15:17.30:146,17,0	1/1:22,0:19:17.94:147,18,0	0/1:14,0:13:6.61:150,0,7	1/1:8,0:6:5.99:48,6,0	1/1:27,0:27:38.56:295,39,0	0/0:5,10:14:3.43:0,3,20	1/1:15,0:14:11.19:206,11,0	1/1:17,0:16:24.09:258,24,0	0/0:5,0:5:14.94:0,15,132
chr10	93150913	.	GTGTA	G	3990.80	PASS	AB=1.000;AC=47;AF=0.904;AN=52;BaseQRankSum=0.190;DP=489;FS=2.319;HRun=0;HaplotypeScore=166.2889;InbreedingCoeff=0.4187;MQ=38.72;MQ0=14;MQRankSum=1.674;QD=9.26;ReadPosRankSum=1.466;VQSLOD=3.1278;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:36,1:34:26.48:238,26,0	1/1:9,0:9:17.94:157,18,0	0/0:19,0:7:9.89:0,10,88	0/1:19,0:8:15.88:16,0,61	1/1:13,0:13:6.02:95,6,0	./.	1/1:20,0:20:11.19:112,11,0	1/1:21,0:21:43.81:365,44,0	1/1:10,0:10:17.95:167,18,0	1/1:17,0:16:43.47:293,43,0	1/1:11,0:11:11.93:101,12,0	1/1:17,0:17:3.47:26,3,0	1/1:19,0:19:14.99:104,15,0	1/1:15,0:15:3.84:26,4,0	1/1:14,0:14:23.92:203,24,0	1/1:12,1:13:17.97:207,18,0	1/1:26,0:25:31.83:272,32,0	1/1:27,0:26:33.51:359,34,0	1/1:11,0:11:17.17:207,17,0	1/1:15,6:21:5.84:48,6,0	1/1:20,0:17:8.61:71,9,0	1/1:13,0:12:8.99:75,9,0	./.	1/1:30,0:29:20.10:138,20,0	0/0:15,0:14:0.89:0,1,2	1/1:23,0:23:32.44:367,32,0	1/1:17,0:15:29.53:197,30,0	1/1:8,0:8:20.80:148,21,0
chr10	93150915	.	GTA	G	3635.77	PASS	AB=0.972;AC=44;AF=0.846;AN=52;BaseQRankSum=0.923;DP=483;FS=2.890;HRun=0;HaplotypeScore=156.2510;InbreedingCoeff=0.1206;MQ=39.58;MQ0=13;MQRankSum=0.725;QD=8.32;ReadPosRankSum=-0.301;VQSLOD=3.5635;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:34:25.65:184,26,0	1/1:8,0:8:15.86:126,16,0	0/0:22,0:10:11.89:0,12,121	0/1:22,0:10:12.88:13,0,88	1/1:12,0:12:5.87:39,6,0	./.	1/1:18,0:19:14.22:118,14,0	1/1:19,0:19:38.47:333,38,0	1/1:10,0:10:16.75:121,17,0	1/1:17,0:16:41.98:287,42,0	1/1:10,1:11:11.62:89,12,0	0/1:17,0:17:10.85:19,0,11	0/1:16,2:18:0.28:113,0,0	0/1:13,1:14:15.12:15,0,25	1/1:14,0:14:23.92:198,24,0	1/1:12,0:12:17.73:124,18,0	1/1:23,3:25:31.83:299,32,0	1/1:25,2:26:35.03:397,35,0	1/1:10,1:11:16.14:170,16,0	1/1:19,0:19:5.94:48,6,0	1/1:19,0:17:8.59:71,9,0	0/1:13,0:12:12.44:60,0,12	./.	1/1:30,0:29:23.20:162,23,0	0/1:14,0:13:11.71:17,0,12	1/1:22,0:22:29.15:318,29,0	1/1:17,0:15:18.61:165,19,0	1/1:8,0:8:20.80:148,21,0
chr10	93150964	.	GTATTATAA	G	20906.68	PASS	AB=0.778;AC=51;AF=0.911;AN=56;BaseQRankSum=6.716;DP=431;FS=2.929;HRun=0;HaplotypeScore=149.1708;InbreedingCoeff=0.7988;MQ=76.28;MQ0=1;MQRankSum=-8.204;QD=53.20;ReadPosRankSum=4.413;VQSLOD=4.9351;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:22:42.14:1154,42,0	1/1:0,6:6:11.90:329,12,0	0/0:20,0:20:39.13:0,39,1497	0/0:18,0:18:39.13:0,39,1500	1/1:3,15:17:27.09:730,27,0	1/1:2,13:15:33.11:907,33,0	1/1:2,7:9:15.05:412,15,0	1/1:5,13:18:39.11:870,39,0	1/1:2,12:14:24.08:660,24,0	1/1:0,14:14:36.09:852,36,0	1/1:0,8:8:21.07:569,21,0	1/1:1,14:15:42.14:1154,42,0	1/1:4,9:13:15.05:412,15,0	1/1:2,12:14:27.09:742,27,0	1/1:1,16:17:42.14:1154,42,0	1/1:1,9:10:24.08:659,24,0	1/1:3,15:18:27.09:742,27,0	1/1:5,15:20:33.11:907,33,0	1/1:6,12:17:33.11:858,33,0	1/1:1,20:21:48.16:1309,48,0	1/1:5,3:8:6.02:154,6,0	1/1:2,14:16:36.12:989,36,0	1/1:2,11:13:30.10:824,30,0	1/1:7,17:24:26.41:735,26,0	1/1:0,18:18:42.14:1145,42,0	1/1:3,17:20:51.16:1326,51,0	1/1:1,16:17:42.14:1155,42,0	0/1:5,2:7:0.89:156,0,1
chr10	93151158	.	C	CA	4099.69	PASS	AB=0.715;AC=27;AF=0.482;AN=56;BaseQRankSum=-4.009;DP=541;FS=20.924;HRun=6;HaplotypeScore=113.1152;InbreedingCoeff=0.5925;MQ=57.29;MQ0=3;MQRankSum=-3.260;QD=13.71;ReadPosRankSum=-3.511;VQSLOD=1.1473;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:47,2:49:24.62:0,25,429	1/1:4,0:12:23.22:113,23,0	0/0:11,0:9:10.86:0,11,137	0/0:4,0:5:2.72:0,3,83	1/1:11,16:27:32.55:433,33,0	0/1:13,7:20:11.75:229,0,12	0/1:11,11:21:13.49:223,0,13	0/0:27,0:27:19.67:0,20,53	1/1:6,5:11:18.52:210,19,0	1/1:5,17:24:5.61:416,6,0	1/1:8,14:21:29.71:405,30,0	0/0:21,0:21:16.69:0,17,56	0/0:13,0:13:7.31:0,7,18	0/0:17,0:17:12.20:0,12,37	1/1:7,1:13:20.46:137,20,0	1/1:4,8:13:20.89:222,21,0	0/0:28,0:28:8.35:0,8,53	1/1:10,2:15:22.42:163,22,0	0/1:12,3:14:20.65:67,0,21	0/1:9,13:21:6.04:312,0,6	0/1:9,6:15:5.10:170,0,5	0/0:15,0:15:11.84:0,12,37	0/0:14,0:14:11.54:0,12,36	0/0:20,0:20:15.28:0,15,47	0/0:21,0:21:15.45:0,15,48	1/1:10,20:32:43.80:515,44,0	1/1:10,10:19:24.94:374,25,0	1/1:4,0:11:19.94:111,20,0
chr10	93151163	.	AAT	A	3003.92	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=1.385;DP=549;FS=47.094;HRun=0;HaplotypeScore=119.0833;InbreedingCoeff=-0.1557;MQ=61.02;MQ0=0;MQRankSum=1.782;QD=6.13;ReadPosRankSum=0.251;VQSLOD=1.1542;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:2.63:0,3,463	0/1:13,0:12:11.80:20,0,12	0/0:13,0:11:25.25:0,25,376	0/1:6,0:6:12.75:13,0,156	0/1:27,0:26:32.87:96,0,33	0/1:17,0:17:4.72:5,0,46	0/1:23,0:22:32.13:65,0,32	1/1:27,0:27:63.41:314,63,0	1/1:12,0:12:0.54:56,1,0	0/1:26,0:25:36.44:88,0,36	0/1:21,0:20:14.69:66,0,15	1/1:26,0:25:26.21:298,26,0	1/1:13,1:14:25.28:162,25,0	1/1:14,1:15:11.92:120,12,0	1/1:12,0:12:1.96:77,2,0	1/1:15,0:15:18.40:111,18,0	1/1:27,0:27:53.92:446,54,0	0/1:15,0:14:13.21:35,0,13	0/1:15,0:15:50.02:83,0,50	0/1:22,0:22:45.24:108,0,45	0/1:16,0:16:3.72:114,0,4	1/1:14,1:15:16.47:152,16,0	1/1:15,1:16:14.77:114,15,0	1/1:19,0:19:24:144,24,0	1/1:21,1:22:30.19:173,30,0	0/1:36,0:36:18.36:175,0,18	0/1:22,0:21:41.17:84,0,41	0/1:11,0:11:0.87:45,0,1
chr10	93151164	.	AT	A	8783.46	PASS	AB=0.969;AC=52;AF=0.929;AN=56;BaseQRankSum=-1.085;DP=539;FS=25.807;HRun=1;HaplotypeScore=90.4933;InbreedingCoeff=0.5238;MQ=62.36;MQ0=0;MQRankSum=-3.822;QD=16.73;ReadPosRankSum=-2.386;VQSLOD=3.2287;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:43,3:46:35.06:193,0,35	1/1:13,0:12:27.37:141,27,0	0/0:14,0:12:33.43:0,33,343	0/1:6,0:6:5.72:6,0,118	1/1:28,0:27:62.78:407,63,0	1/1:17,0:17:21.75:134,22,0	1/1:21,0:20:37.13:262,37,0	1/1:0,26:26:75.10:935,75,0	1/1:12,0:12:25.52:162,26,0	1/1:25,0:24:45.26:329,45,0	1/1:21,0:20:41.95:273,42,0	1/1:12,13:24:60.59:748,61,0	1/1:1,12:13:26.99:312,27,0	1/1:2,13:15:26.33:353,26,0	1/1:11,0:11:27.34:168,27,0	1/1:15,0:15:33.45:238,33,0	1/1:26,0:26:53.27:352,53,0	1/1:15,0:14:28.99:171,29,0	1/1:15,0:15:10.23:137,10,0	1/1:22,0:22:34.03:260,34,0	1/1:16,1:17:35.52:294,36,0	1/1:6,9:15:32.34:409,32,0	1/1:4,10:14:34.74:445,35,0	1/1:1,18:19:40.83:582,41,0	1/1:1,21:22:42.09:545,42,0	1/1:33,0:33:77.77:514,78,0	1/1:22,0:21:35.17:241,35,0	1/1:11,0:11:29.51:172,30,0
chr10	93153261	.	CT	C	371.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.405;DP=524;FS=0.874;HRun=9;HaplotypeScore=51.3261;InbreedingCoeff=0.8847;MQ=66.33;MQ0=1;MQRankSum=-0.477;QD=17.71;ReadPosRankSum=3.571;VQSLOD=3.7195;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:80.26:0,80,904	0/0:7,0:7:21.06:0,21,241	0/0:15,0:13:10.18:0,10,261	0/0:11,0:9:15.93:0,16,175	0/0:24,0:24:63.15:0,63,697	0/0:15,0:15:39.09:0,39,438	0/0:19,0:19:48.14:0,48,554	0/0:34,1:35:62.78:0,63,960	0/0:16,0:16:41.61:0,42,460	0/0:27,0:27:60.18:0,60,692	0/0:18,0:18:48.13:0,48,546	0/0:16,0:16:48.13:0,48,544	0/0:16,0:16:48.14:0,48,552	0/0:14,0:14:42.12:0,42,484	0/0:13,0:13:30.09:0,30,346	0/0:9,0:9:27.08:0,27,312	0/0:26,0:26:69.16:0,69,771	0/0:18,0:18:48.14:0,48,554	0/0:22,0:22:54.14:0,54,611	0/0:18,0:18:51.15:0,51,588	0/0:9,0:9:24.07:0,24,277	0/0:12,0:12:30.09:0,30,346	0/0:18,1:19:8.64:0,9,353	0/0:13,0:13:36.05:0,36,390	0/0:32,0:32:96.29:0,96,1107	0/0:28,0:28:84.25:0,84,969	0/0:21,0:21:57.09:0,57,630	1/1:2,19:21:51.03:467,51,0
chr10	93153693	.	T	TTG	17048.21	PASS	AB=0.558;AC=35;AF=0.625;AN=56;BaseQRankSum=-4.309;DP=829;FS=0.000;HRun=0;HaplotypeScore=129.7704;InbreedingCoeff=0.9017;MQ=64.88;MQ0=8;MQRankSum=-1.772;QD=32.11;ReadPosRankSum=1.966;VQSLOD=6.4108;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,111,1328	0/0:4,0:4:9.03:0,9,112	0/0:41,0:25:29.04:0,29,335	0/0:55,0:29:62.95:0,63,784	1/1:5,23:28:48.16:780,48,0	0/0:21,0:21:60.15:0,60,710	0/0:44,0:44:99:0,114,1403	1/1:9,21:30:63.18:949,63,0	1/1:6,26:32:54.18:891,54,0	1/1:6,23:29:72.20:1089,72,0	1/1:4,17:20:38.70:573,39,0	1/1:4,27:31:34.80:1074,35,0	1/1:6,31:39:74.91:1223,75,0	1/1:3,16:19:45.15:733,45,0	0/0:34,0:34:84.23:0,84,1015	1/1:1,23:24:57.19:941,57,0	0/0:25,0:25:48.15:0,48,599	0/0:22,0:22:47.54:0,48,614	1/1:10,14:25:23.99:691,24,0	0/1:5,19:24:23.88:692,0,24	1/1:7,47:54:99:1927,123,0	1/1:4,17:21:7.31:423,7,0	1/1:7,17:24:25.36:904,25,0	1/1:5,27:32:57.19:941,57,0	1/1:5,23:27:25.44:813,25,0	1/1:5,28:32:85.52:1357,86,0	1/1:6,28:34:64.05:1047,64,0	0/0:7,0:7:18.02:0,18,199
chr10	93156039	.	GC	G	15570.14	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-8.144;DP=630;FS=1.176;HRun=1;HaplotypeScore=121.5519;InbreedingCoeff=0.9980;MQ=84.22;MQ0=0;MQRankSum=-6.152;QD=31.02;ReadPosRankSum=2.592;VQSLOD=4.7078;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:99:1215,102,0	0/0:7,0:7:18.06:0,18,288	0/0:15,0:15:45.14:0,45,667	0/0:24,0:25:71.49:0,71,979	1/1:2,21:23:64.02:742,64,0	1/1:0,14:14:36.11:422,36,0	1/1:0,31:31:75.22:887,75,0	1/1:2,32:34:96.20:1061,96,0	1/1:2,19:21:47.32:578,47,0	1/1:1,14:15:39.55:442,40,0	1/1:0,16:16:48.14:568,48,0	1/1:3,12:15:37.31:470,37,0	1/1:0,18:18:42.12:502,42,0	1/1:1,25:26:67.08:774,67,0	0/0:26,0:26:78.27:0,78,1227	1/1:1,23:24:62.74:740,63,0	0/0:32,0:32:96.33:0,96,1534	0/0:23,0:23:66.20:0,66,1029	1/1:9,22:31:83.80:921,84,0	1/1:1,23:24:71.88:836,72,0	1/1:5,32:37:99:1216,104,0	1/1:2,9:11:30.08:348,30,0	1/1:0,13:13:36.07:415,36,0	1/1:0,28:28:69.21:822,69,0	1/1:0,17:17:42.12:484,42,0	1/1:3,29:32:85.85:999,86,0	1/1:0,25:25:67.42:781,67,0	1/1:2,9:11:29.01:348,29,0
chr10	93156285	.	A	ATC	20388	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-1.983;DP=539;FS=8.576;HRun=0;HaplotypeScore=87.6992;InbreedingCoeff=0.9424;MQ=86.86;MQ0=0;MQRankSum=-3.174;QD=48.20;ReadPosRankSum=3.389;VQSLOD=6.0265;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:75.26:1443,75,0	0/0:8,0:8:24.08:0,24,362	0/0:22,0:22:58.44:0,58,822	0/1:17,0:17:0.30:0,0,506	1/1:0,24:24:69.24:1327,69,0	1/1:3,17:20:51.17:956,51,0	1/1:1,18:19:54.19:1039,54,0	1/1:7,18:27:72.19:1297,72,0	1/1:1,17:17:48.16:927,48,0	1/1:1,16:17:48.16:927,48,0	1/1:0,13:14:39.13:752,39,0	1/1:1,18:19:51.17:980,51,0	1/1:0,21:21:63.22:1211,63,0	1/1:1,10:11:27.09:521,27,0	0/0:27,0:27:81.28:0,81,1237	1/1:0,20:19:51.17:985,51,0	0/0:32,0:32:93.30:0,93,1399	0/0:27,0:27:78.24:0,78,1171	1/1:2,14:16:45.14:823,45,0	1/1:2,14:17:39.13:753,39,0	1/1:1,14:15:42.14:811,42,0	1/1:2,11:13:33.11:636,33,0	1/1:3,12:15:33.11:637,33,0	1/1:0,20:20:42.14:811,42,0	1/1:2,19:21:54.19:1043,54,0	1/1:5,21:26:75.23:1348,75,0	1/1:1,12:13:30.10:579,30,0	1/1:0,11:11:30.10:579,30,0
chr10	93156387	.	C	CT	4137.77	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.159;DP=547;FS=2.956;HRun=10;HaplotypeScore=99.3527;InbreedingCoeff=0.8265;MQ=62.72;MQ0=55;MQRankSum=0.070;QD=8.43;ReadPosRankSum=2.704;VQSLOD=2.4919;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:33:49.85:217,50,0	1/1:3,4:7:12.03:128,12,0	0/0:29,0:17:21.98:0,22,231	0/0:26,0:18:18.65:0,19,149	1/1:13,0:11:10.96:50,11,0	1/1:24,0:20:46.12:202,46,0	1/1:17,0:17:37.76:161,38,0	1/1:29,0:29:56.70:243,57,0	1/1:21,0:20:40.18:166,40,0	1/1:15,0:14:26.90:112,27,0	1/1:15,0:14:27.17:120,27,0	1/1:20,0:17:15.49:86,15,0	1/1:22,0:18:28.07:119,28,0	1/1:16,0:10:3.45:29,3,0	1/1:7,15:22:33.85:501,34,0	1/1:15,0:14:19.17:88,19,0	1/1:4,18:23:26.11:311,26,0	1/1:4,20:24:54.13:574,54,0	1/1:18,0:16:29.53:122,30,0	1/1:10,0:6:13.39:56,13,0	1/1:20,0:20:42.85:176,43,0	1/1:13,0:7:15.21:65,15,0	1/1:9,0:6:8.04:34,8,0	1/1:26,0:22:32.61:133,33,0	1/1:24,0:19:26.95:114,27,0	1/1:16,0:15:32.36:137,32,0	1/1:20,0:18:26.78:111,27,0	1/1:14,0:13:16.54:81,17,0
chr10	93156391	.	T	TTG	12125.86	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-11.110;DP=567;FS=6.405;HRun=0;HaplotypeScore=80.6231;InbreedingCoeff=0.9518;MQ=60.17;MQ0=55;MQRankSum=2.371;QD=27.62;ReadPosRankSum=4.000;VQSLOD=5.8996;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,33:34:49.24:918,49,0	0/0:6,0:6:16.30:0,16,80	0/0:29,0:16:32.48:0,32,465	0/0:25,0:17:33.54:0,34,341	1/1:1,13:12:14.97:223,15,0	1/1:3,26:25:51.16:861,51,0	1/1:0,18:19:42.14:708,42,0	1/1:3,26:29:59.29:1173,59,0	1/1:5,18:22:26.30:755,26,0	1/1:1,13:13:33.11:568,33,0	1/1:0,15:15:35.94:547,36,0	1/1:3,18:19:30.41:463,30,0	1/1:2,21:19:35.99:585,36,0	1/1:6,11:11:15:216,15,0	0/0:22,0:22:59.02:0,59,315	1/1:2,13:14:21.06:341,21,0	0/0:23,0:23:43.76:0,44,240	0/0:23,0:23:55.01:0,55,239	1/1:3,17:18:45.07:686,45,0	1/1:0,11:7:17.99:276,18,0	1/1:1,18:19:48.16:830,48,0	1/1:4,10:8:20.97:299,21,0	1/1:5,4:6:15.02:203,15,0	1/1:12,21:29:4.01:585,4,0	1/1:3,20:18:30.10:510,30,0	1/1:1,15:15:36.09:612,36,0	1/1:2,21:21:29.89:518,30,0	1/1:2,9:10:15.52:252,16,0
chr10	93156399	.	AGTGTGT	A	873.08	PASS	AB=0.885;AC=11;AF=0.212;AN=52;BaseQRankSum=2.512;DP=570;FS=26.541;HRun=0;HaplotypeScore=152.1409;InbreedingCoeff=0.2867;MQ=53.77;MQ0=56;MQRankSum=-4.213;QD=5.98;ReadPosRankSum=0.010;VQSLOD=0.5553;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:33:36.12:0,36,956	1/1:8,0:8:6.39:46,6,0	./.	./.	0/0:15,0:13:12.04:0,12,335	0/0:27,0:25:26.12:0,26,628	0/0:16,0:17:12.04:0,12,273	0/0:26,0:26:6.02:0,6,81	0/0:23,0:23:33.11:0,33,774	0/0:18,0:17:18.06:0,18,406	0/1:17,1:16:46.29:46,0,315	0/0:22,0:21:14.49:0,14,237	0/1:24,0:20:39.87:40,0,230	0/0:19,0:15:23.29:0,23,351	0/1:14,7:23:35.16:465,0,35	0/0:13,0:11:12.04:0,12,359	1/1:11,4:16:9.02:164,9,0	1/1:19,3:22:12.04:224,12,0	0/0:20,0:19:8.61:0,9,236	0/0:14,0:10:12.04:0,12,276	0/0:28,0:28:45.15:0,45,1232	0/1:16,0:10:25.12:25,0,132	0/0:7,0:6:2.02:0,2,37	0/0:29,0:26:29.78:0,30,335	0/1:13,0:14:12.62:13,0,107	0/0:20,0:19:32.14:0,32,799	0/0:28,0:26:32.85:0,33,746	0/0:8,0:6:6.02:0,6,149
chr10	93156569	.	TC	T	20317.49	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=10.122;DP=668;FS=8.330;HRun=1;HaplotypeScore=75.9198;InbreedingCoeff=0.9882;MQ=79.18;MQ0=3;MQRankSum=-4.656;QD=38.63;ReadPosRankSum=3.867;VQSLOD=5.3271;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,48:48:99:1762,126,0	0/0:11,0:11:33.07:0,33,478	0/0:18,0:18:50.86:0,51,777	0/0:22,0:22:50.43:0,50,867	1/1:0,29:29:81.24:1105,81,0	1/1:0,19:18:51.17:713,51,0	1/1:0,30:30:84.28:1175,84,0	1/1:1,23:24:69.23:959,69,0	1/1:0,28:28:78.26:1089,78,0	1/1:0,29:28:84.28:1173,84,0	1/1:0,17:17:48.12:649,48,0	1/1:0,33:33:90.30:1258,90,0	1/1:0,21:21:57.19:797,57,0	1/1:0,20:19:51.17:707,51,0	0/0:31,0:31:90.29:0,90,1411	1/1:0,19:19:51.17:708,51,0	0/0:34,0:34:99:0,102,1619	0/0:26,0:26:78.27:0,78,1239	1/1:0,22:22:66.19:881,66,0	1/1:0,20:20:57.19:797,57,0	1/1:0,32:32:87.29:1217,87,0	1/1:0,14:14:42.14:586,42,0	1/1:0,12:12:36.12:504,36,0	1/1:0,23:23:69.23:963,69,0	1/1:0,26:26:69.23:965,69,0	1/1:0,22:22:66.22:923,66,0	1/1:0,33:33:90.30:1258,90,0	1/1:0,5:5:9.03:126,9,0
chr10	93157128	.	G	GA	20924.48	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-12.218;DP=671;FS=2.910;HRun=3;HaplotypeScore=66.9828;InbreedingCoeff=0.9983;MQ=86.47;MQ0=0;MQRankSum=-4.441;QD=41.60;ReadPosRankSum=2.945;VQSLOD=4.1425;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:57.19:854,57,0	0/0:8,0:8:24.08:0,24,312	0/0:16,0:16:42.01:0,42,486	0/0:28,0:29:51.16:0,51,670	1/1:2,19:21:57.19:853,57,0	1/1:1,17:18:48.16:720,48,0	1/1:0,34:34:93.32:1394,93,0	1/1:0,24:24:72.24:1079,72,0	1/1:0,28:28:81.27:1214,81,0	1/1:0,20:20:57.19:854,57,0	1/1:0,10:11:29.89:442,30,0	1/1:0,21:21:63.21:943,63,0	1/1:0,19:19:48.16:719,48,0	1/1:0,25:25:72.24:1079,72,0	0/0:41,0:41:99:0,117,1505	1/1:0,21:21:60.20:899,60,0	0/0:35,0:35:99:0,102,1292	0/0:39,0:39:99:0,108,1401	1/1:2,21:23:69.20:991,69,0	1/1:0,10:10:30.10:450,30,0	1/1:0,69:69:99:3013,202,0	1/1:3,21:24:60.20:899,60,0	1/1:1,9:10:27.09:405,27,0	1/1:0,33:33:93.32:1394,93,0	1/1:1,18:19:42.14:628,42,0	1/1:0,27:27:81.26:1195,81,0	1/1:0,15:15:39.13:585,39,0	1/1:0,7:7:21.07:315,21,0
chr10	93158131	.	GA	G	13746.17	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.859;DP=574;FS=9.588;HRun=7;HaplotypeScore=63.1239;InbreedingCoeff=0.9952;MQ=81.96;MQ0=0;MQRankSum=-6.052;QD=25.69;ReadPosRankSum=3.976;VQSLOD=5.1377;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,33:36:96.22:979,96,0	1/1:1,10:11:27.06:275,27,0	0/0:19,0:17:28.35:0,28,357	0/0:20,0:18:20.47:0,20,335	1/1:2,31:33:87.19:888,87,0	1/1:1,17:18:45.10:459,45,0	1/1:1,20:21:45.10:459,45,0	1/1:5,24:29:69.11:684,69,0	1/1:1,12:13:33.07:337,33,0	1/1:2,19:21:57.13:582,57,0	1/1:0,11:11:27.06:275,27,0	1/1:1,11:12:30.07:306,30,0	1/1:0,16:16:39.09:398,39,0	1/1:2,19:21:48.11:490,48,0	1/1:0,18:18:54.12:551,54,0	1/1:1,12:13:33.08:337,33,0	1/1:3,43:46:99:1213,120,0	1/1:3,22:25:63.14:643,63,0	1/1:5,17:22:48.10:490,48,0	1/1:4,17:21:51.07:509,51,0	1/1:3,16:19:39.09:398,39,0	1/1:1,11:12:35.95:351,36,0	1/1:1,27:28:69.16:704,69,0	1/1:3,22:25:60.13:612,60,0	1/1:0,20:20:57.13:582,57,0	1/1:0,15:15:45.10:459,45,0	1/1:1,17:18:45.06:459,45,0	1/1:0,11:11:30.07:306,30,0
chr10	93159766	.	C	CA	14062.43	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-1.699;DP=727;FS=4.178;HRun=8;HaplotypeScore=89.5709;InbreedingCoeff=0.9974;MQ=71.23;MQ0=1;MQRankSum=-4.314;QD=22.36;ReadPosRankSum=2.732;VQSLOD=5.3799;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:34:89.95:991,90,0	1/1:0,0:9:22.85:121,23,0	0/0:25,0:22:40.67:0,41,376	0/0:19,0:18:21.40:0,21,300	1/1:5,20:25:60.10:664,60,0	0/0:34,0:33:90.05:0,90,824	0/0:20,0:20:45.02:0,45,411	1/1:7,28:35:84.19:934,84,0	1/1:2,21:24:60.16:682,60,0	1/1:6,38:44:99:1411,123,0	1/1:3,22:25:63.19:727,63,0	1/1:4,1:19:46.09:252,46,0	1/1:3,1:22:45.45:231,45,0	1/1:5,1:18:22.89:136,23,0	1/1:5,1:27:62.66:338,63,0	1/1:0,19:18:54.16:623,54,0	1/1:2,1:25:62.66:338,63,0	1/1:1,1:25:53.97:274,54,0	1/1:4,25:29:72.21:831,72,0	1/1:3,29:32:90.22:1021,90,0	1/1:0,12:12:36.11:415,36,0	1/1:1,2:28:46.61:362,47,0	1/1:2,0:37:88.06:448,88,0	1/1:3,1:30:71.19:381,71,0	1/1:2,1:24:59.82:323,60,0	1/1:4,30:35:93.07:1029,93,0	1/1:2,35:36:74.84:1115,75,0	1/1:0,13:13:36.11:415,36,0
chr10	93160787	.	AGG	A	2706.31	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-13.254;DP=575;FS=2.026;HRun=9;HaplotypeScore=124.3029;InbreedingCoeff=0.9720;MQ=79.94;MQ0=1;MQRankSum=-2.574;QD=27.62;ReadPosRankSum=2.036;VQSLOD=3.1496;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.05:0,90,815	1/1:0,13:13:39.12:454,39,0	0/0:17,0:18:50.87:0,51,699	0/0:15,0:15:8.40:0,8,216	0/0:14,0:14:33.76:0,34,258	0/0:8,0:17:12.01:0,12,116	0/0:9,0:25:54.10:0,54,574	0/0:23,0:23:51.95:0,52,410	0/0:19,0:19:56.78:0,57,442	0/0:11,0:11:23.93:0,24,193	0/0:15,0:15:29.90:0,30,235	0/0:23,0:23:59.79:0,60,480	0/0:24,0:24:56.30:0,56,429	0/0:16,0:16:41.85:0,42,328	1/1:2,22:23:57.17:664,57,0	0/0:10,0:10:26.90:0,27,210	1/1:8,25:33:69.19:804,69,0	1/1:1,27:28:81.24:944,81,0	0/0:27,0:27:76.92:0,77,591	0/0:18,0:18:37.77:0,38,295	0/0:31,0:31:80.71:0,81,635	0/0:13,0:14:35.82:0,36,279	0/0:15,0:15:41.84:0,42,326	0/0:31,0:31:77.70:0,78,605	0/0:19,0:18:47.83:0,48,373	0/0:27,0:27:74.67:0,75,576	0/0:21,0:21:50.81:0,51,396	0/0:10,0:10:26.92:0,27,214
chr10	93160788	.	G	GGA	6270.29	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=-10.529;DP=572;FS=15.117;HRun=0;HaplotypeScore=114.6913;InbreedingCoeff=0.8080;MQ=80.04;MQ0=1;MQRankSum=-1.544;QD=14.15;ReadPosRankSum=2.727;VQSLOD=3.8256;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:36:90.30:1569,90,0	0/0:13,0:13:38.77:0,39,293	0/0:18,0:18:49.03:0,49,686	0/0:15,0:15:25.54:0,26,254	1/1:14,0:14:26.51:161,27,0	0/1:14,0:14:34.94:75,0,35	0/1:26,0:26:99:140,0,127	1/1:24,0:24:49.50:288,49,0	1/1:19,0:19:53.97:264,54,0	1/1:11,0:11:24.37:143,24,0	1/1:16,0:16:28.23:136,28,0	1/1:23,0:23:47.61:255,48,0	1/1:24,0:24:53.84:260,54,0	1/1:15,0:15:39.63:192,40,0	0/0:24,0:23:59.78:0,60,466	1/1:9,0:9:25.57:125,26,0	0/0:31,0:31:85.52:0,86,661	0/0:28,0:28:83.66:0,84,644	1/1:26,0:26:74.13:429,74,0	1/1:17,0:17:41.90:202,42,0	1/1:31,0:31:65.13:357,65,0	1/1:14,0:14:30.14:142,30,0	1/1:15,0:15:39.80:196,40,0	1/1:32,0:32:73.86:361,74,0	1/1:18,0:17:45.36:221,45,0	1/1:28,0:28:77.09:402,77,0	1/1:21,0:21:48.25:236,48,0	1/1:10,0:10:25.16:118,25,0
chr10	93160789	.	G	GA	14012.92	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-15.227;DP=584;FS=16.628;HRun=0;HaplotypeScore=78.4610;InbreedingCoeff=0.9982;MQ=79.63;MQ0=1;MQRankSum=-0.061;QD=33.68;ReadPosRankSum=2.201;VQSLOD=3.4137;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:87.75:518,88,0	0/0:13,0:13:37.34:0,37,194	0/0:17,0:17:51.13:0,51,659	0/0:15,0:15:25.12:0,25,246	1/1:1,13:14:39.01:508,39,0	0/0:15,0:15:19.45:0,19,125	0/0:25,0:25:33.29:0,33,326	1/1:2,25:27:66.11:834,66,0	1/1:0,19:19:57.19:815,57,0	1/1:1,11:12:33.05:399,33,0	1/1:1,14:15:29.86:424,30,0	1/1:2,22:24:60.15:834,60,0	1/1:0,24:24:57.19:811,57,0	1/1:0,15:15:42.14:598,42,0	0/0:24,0:23:57.63:0,58,312	1/1:0,9:9:27.09:386,27,0	0/0:31,0:31:84.05:0,84,491	0/0:28,0:28:80.54:0,81,425	1/1:0,26:26:78.04:1062,78,0	1/1:0,17:17:45.08:606,45,0	1/1:2,32:34:74.67:1109,75,0	1/1:1,14:15:36.11:489,36,0	1/1:0,15:15:42.14:600,42,0	1/1:1,32:33:78.25:1115,78,0	1/1:0,20:19:48.16:684,48,0	1/1:2,28:30:84.11:1117,84,0	1/1:0,21:21:51.17:727,51,0	1/1:0,10:10:27.09:378,27,0
chr10	93161070	.	GCATTCATT	G	4758.09	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.421;DP=609;FS=11.949;HRun=0;HaplotypeScore=152.3343;InbreedingCoeff=0.9795;MQ=72.23;MQ0=1;MQRankSum=-11.417;QD=60.23;ReadPosRankSum=1.461;VQSLOD=4.5182;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,5256	1/1:1,12:13:36.12:1040,36,0	0/0:15,0:11:8.65:0,9,963	0/0:18,0:16:23.71:0,24,1213	0/0:11,0:11:30.10:0,30,1265	0/0:21,0:21:63.22:0,63,2853	0/0:34,0:34:99:0,102,4258	0/0:22,0:22:63.22:0,63,2794	0/0:31,0:31:93.32:0,93,4205	0/0:27,0:27:81.28:0,81,3576	0/0:15,0:15:45.15:0,45,2038	0/0:32,0:32:96.33:0,96,4334	0/0:15,0:15:45.15:0,45,1907	0/0:26,0:26:75.26:0,75,3335	1/1:1,20:21:54.19:1576,54,0	0/0:24,0:24:72.25:0,72,3135	1/1:5,24:29:42.14:1207,42,0	1/1:1,15:16:33.58:936,34,0	0/0:17,0:17:48.16:0,48,2099	0/0:15,0:15:42.14:0,42,1891	0/0:36,0:36:99:0,108,4750	0/0:15,0:15:45.15:0,45,1934	0/0:16,0:16:48.15:0,48,2064	0/0:31,0:31:93.32:0,93,3863	0/0:10,0:10:30.10:0,30,1358	0/0:20,0:20:60.21:0,60,2706	0/0:33,0:33:93.32:0,93,4174	0/0:6,0:6:18.06:0,18,815
chr10	93162528	.	CGTGTGTGTGTGT	C	3228.29	PASS	AB=0.860;AC=23;AF=0.460;AN=50;BaseQRankSum=6.659;DP=728;FS=11.072;HRun=0;HaplotypeScore=236.1757;InbreedingCoeff=-0.0105;MQ=61.21;MQ0=18;MQRankSum=-4.621;QD=7.25;ReadPosRankSum=-2.391;VQSLOD=0.7654;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:8,2:10:3.01:103,3,0	./.	0/0:29,0:18:3.01:0,3,40	1/1:14,9:22:2.08:16,2,0	0/0:23,0:25:19.22:0,19,160	0/0:15,0:19:11.99:0,12,123	0/1:32,0:32:8.06:8,0,51	1/1:28,1:32:11.98:325,12,0	0/0:18,0:18:14.04:0,14,143	0/0:7,0:12:0.47:0,0,1	0/1:27,0:29:81.39:228,0,81	0/1:18,0:24:24.11:347,0,24	1/1:14,0:25:2.92:45,3,0	1/1:19,17:37:20.86:602,21,0	0/1:16,9:25:40.78:556,0,41	0/1:23,10:34:46.74:237,0,47	0/1:16,8:24:30.08:191,0,30	0/1:21,0:21:10.95:20,0,11	0/0:12,6:18:2.92:0,3,17	0/1:65,1:62:69.59:111,0,70	0/0:7,0:12:2.99:0,3,23	1/1:11,0:17:2.90:16,3,0	0/0:28,0:47:2.85:0,3,19	./.	0/1:19,5:23:35.46:227,0,35	1/1:11,5:16:0.37:343,0,0	0/0:9,0:10:8.99:0,9,94
chr10	93162571	.	GTGTGTGTA	G	914.22	PASS	AB=0.965;AC=13;AF=0.232;AN=56;BaseQRankSum=11.263;DP=741;FS=47.573;HRun=0;HaplotypeScore=204.9915;InbreedingCoeff=-0.3136;MQ=53.68;MQ0=28;MQRankSum=-9.083;QD=2.99;ReadPosRankSum=5.660;VQSLOD=0.8724;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:68:0,68,537	0/1:9,0:9:20.49:20,0,99	0/0:30,0:9:9.71:0,10,141	0/0:45,0:14:12:0,12,234	0/1:26,0:26:22.38:22,0,187	0/1:13,6:20:54.88:55,0,170	0/0:27,0:26:32.33:0,32,261	0/0:27,0:22:40.63:0,41,442	0/1:28,0:29:99:127,0,199	0/0:18,0:18:47.57:0,48,407	0/0:11,0:11:8.99:0,9,74	0/1:23,0:22:83.88:84,0,250	0/1:24,0:21:99:154,0,104	0/0:30,0:30:31.12:0,31,254	0/1:36,0:35:99:129,0,165	0/1:30,0:29:99:171,0,338	0/1:28,0:26:34.60:35,0,182	0/1:28,0:28:13.52:14,0,342	0/0:15,0:13:35.69:0,36,280	0/0:26,0:26:41.72:0,42,318	0/0:62,0:64:88.76:0,89,745	0/0:14,0:14:21.44:0,21,173	0/0:19,0:18:7.83:0,8,184	0/0:46,0:46:45.28:0,45,349	0/0:13,0:11:20.98:0,21,175	0/1:25,0:25:30.87:31,0,384	0/1:18,0:18:99:143,0,132	0/1:6,1:7:82.32:82,0,97
chr10	93163296	.	GGTGTGTGT	G	674.21	PASS	AB=0.917;AC=14;AF=0.304;AN=46;BaseQRankSum=3.298;DP=468;FS=24.555;HRun=0;HaplotypeScore=117.8526;InbreedingCoeff=0.4904;MQ=60.09;MQ0=13;MQRankSum=-4.163;QD=5.81;ReadPosRankSum=0.275;VQSLOD=0.3211;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:17.93:0,18,627	0/0:6,0:6:6.02:0,6,192	./.	./.	0/0:17,0:17:3.01:0,3,65	0/0:10,0:10:15.05:0,15,473	0/0:30,0:29:12.04:0,12,386	0/0:24,0:23:4.26:0,4,42	0/1:4,0:5:9.93:10,0,36	0/0:13,0:13:5.99:0,6,50	./.	1/1:12,3:15:9.03:204,9,0	1/1:12,2:14:1.33:141,1,0	./.	0/0:18,0:18:18.04:0,18,490	1/1:3,0:5:3.01:56,3,0	0/0:29,0:29:27.09:0,27,836	0/0:26,0:26:39.12:0,39,1176	0/1:23,0:22:6.70:7,0,84	0/0:10,0:10:6.02:0,6,177	0/0:39,0:34:8.90:0,9,147	1/1:12,0:14:9.02:172,9,0	./.	1/1:21,8:28:9.02:173,9,0	1/1:9,0:10:3.01:56,3,0	0/0:12,0:17:22.80:0,23,221	0/0:10,0:10:12.51:0,13,207	0/0:3,0:3:3.01:0,3,114
chr10	93164603	.	TGCGTAA	T	1574.36	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.500;DP=675;FS=0.783;HRun=0;HaplotypeScore=142.5298;InbreedingCoeff=0.9979;MQ=81.36;MQ0=0;MQRankSum=-8.087;QD=34.23;ReadPosRankSum=0.550;VQSLOD=3.5997;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:34:48.16:1179,48,0	0/0:18,0:18:54.19:0,54,1977	0/0:24,0:24:63.67:0,64,1877	0/0:23,0:23:61.37:0,61,1643	0/0:24,0:24:72.23:0,72,2361	0/0:22,0:22:66.23:0,66,2338	0/0:15,0:15:39.13:0,39,1422	0/0:26,0:26:78.26:0,78,2485	0/0:20,0:20:60.21:0,60,2099	0/0:26,0:26:78.27:0,78,2796	0/0:16,0:16:45.15:0,45,1648	0/0:22,0:22:66.23:0,66,2340	0/0:21,0:21:63.22:0,63,2288	0/0:26,0:26:75.26:0,75,2609	0/0:22,0:22:66.23:0,66,2390	0/0:20,0:20:60.21:0,60,2167	0/0:35,0:35:99:0,105,3797	0/0:17,0:17:51.17:0,51,1780	0/0:26,0:26:75.26:0,75,2699	0/0:22,0:22:60.21:0,60,2118	0/0:48,0:47:99:0,141,5030	0/0:22,0:22:66.21:0,66,2279	0/0:29,0:29:87.28:0,87,3011	0/0:21,0:21:63.22:0,63,2256	0/0:28,0:28:84.29:0,84,3011	0/0:35,0:35:99:0,105,3692	0/0:21,0:21:63.22:0,63,2255	1/1:0,12:12:21.07:516,21,0
chr10	93165260	.	CCCATCCAT	C	821.19	PASS	AB=1.000;AC=7;AF=0.135;AN=52;BaseQRankSum=-0.950;DP=744;FS=0.000;HRun=0;HaplotypeScore=207.1605;InbreedingCoeff=0.5038;MQ=67.41;MQ0=12;MQRankSum=-3.055;QD=6.68;ReadPosRankSum=1.483;VQSLOD=2.4700;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:37:33.42:0,33,318	0/1:8,0:8:8.67:47,0,9	./.	./.	0/0:18,0:18:32.94:0,33,895	1/1:11,15:25:24.08:602,24,0	1/1:15,13:28:18.01:277,18,0	0/0:31,0:27:3.01:0,3,31	0/0:34,0:34:39.13:0,39,1290	0/0:35,0:35:78.26:0,78,2142	0/0:18,0:18:20.94:0,21,508	0/0:36,0:36:72.25:0,72,2738	0/0:13,0:13:30.10:0,30,1156	0/0:29,0:29:63.18:0,63,2414	0/1:31,0:31:26.01:26,0,166	0/0:28,0:28:45.15:0,45,1489	0/1:30,0:30:2.17:2,0,74	0/0:14,0:14:5.23:0,5,20	0/0:23,0:21:15.05:0,15,418	0/0:18,0:18:27.09:0,27,847	0/0:75,0:74:78.27:0,78,2549	0/0:23,0:23:39.12:0,39,1298	0/0:12,0:11:27.09:0,27,943	0/0:24,0:24:45.13:0,45,1663	0/0:25,0:25:48.64:0,49,1788	0/0:32,0:31:45.13:0,45,1281	0/0:21,0:22:63.22:0,63,1686	0/0:9,0:10:24.07:0,24,884
chr10	93165278	.	C	CATCT	11633.59	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-12.860;DP=788;FS=13.992;HRun=0;HaplotypeScore=131.3983;InbreedingCoeff=0.9976;MQ=55.30;MQ0=22;MQRankSum=5.342;QD=36.82;ReadPosRankSum=4.089;VQSLOD=4.0364;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:50.53:0,51,599	0/0:8,0:8:21.02:0,21,211	0/0:35,0:9:20.01:0,20,214	0/0:50,0:17:40.61:0,41,362	1/1:2,19:21:44.79:826,45,0	0/0:25,0:24:45.03:0,45,430	0/0:25,0:25:41.75:0,42,331	0/0:40,0:32:83.99:0,84,755	1/1:1,31:32:44.88:1071,45,0	1/1:21,13:33:92.87:1699,93,0	1/1:1,17:20:20.92:430,21,0	0/0:36,0:36:99:0,108,1597	0/0:15,0:15:45.04:0,45,653	0/0:32,0:32:93.10:0,93,1382	0/0:33,0:33:90.11:0,90,990	1/1:2,30:35:45.15:1209,45,0	0/0:27,0:27:77.77:0,78,743	0/0:18,0:17:44.93:0,45,410	1/1:5,15:16:44.85:544,45,0	1/1:2,17:19:41.88:786,42,0	1/1:5,64:68:36.14:1958,36,0	0/0:15,0:15:45.04:0,45,657	0/0:11,0:10:30.02:0,30,464	0/0:29,0:29:58.99:0,59,994	0/0:25,0:25:72.05:0,72,1003	1/1:5,26:31:78.11:1384,78,0	1/1:22,10:32:96.05:1727,96,0	0/0:8,0:8:24.08:0,24,430
chr10	93165295	.	AT	A	425.99	PASS	AB=0.804;AC=5;AF=0.089;AN=56;BaseQRankSum=7.082;DP=813;FS=1.186;HRun=1;HaplotypeScore=144.2337;InbreedingCoeff=-0.0942;MQ=58.20;MQ0=20;MQRankSum=-4.712;QD=3.84;ReadPosRankSum=0.619;VQSLOD=0.2035;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:49.63:0,50,503	0/1:5,2:7:20.14:37,0,20	0/0:44,1:21:19.54:0,20,557	0/0:64,1:16:45.15:0,45,654	0/0:26,0:25:69.23:0,69,1003	0/0:24,0:23:16.47:0,16,336	0/1:25,0:25:56.48:56,0,474	0/0:36,0:28:80.71:0,81,1110	0/0:26,0:26:50.68:0,51,648	0/0:36,0:35:99:0,102,1528	0/0:19,0:19:34.78:0,35,371	0/0:35,0:35:99:0,105,1627	0/0:19,0:19:57.15:0,57,847	0/0:35,0:35:99:0,102,1562	0/1:19,17:36:99:257,0,240	0/0:33,0:33:58.75:0,59,829	0/1:15,13:28:99:178,0,131	0/1:13,2:14:15.48:15,0,166	0/0:20,0:17:45.11:0,45,664	0/0:25,0:24:59.76:0,60,795	0/0:68,0:66:99:0,126,1794	0/0:21,0:21:57.16:0,57,841	0/0:13,0:12:36.12:0,36,551	0/0:29,0:29:81.24:0,81,1182	0/0:25,0:25:66.19:0,66,1007	0/0:22,0:22:63.21:0,63,948	0/0:32,0:32:96.32:0,96,1386	0/0:12,0:12:34.36:0,34,513
chr10	93165297	.	CCAT	C	828.82	PASS	AB=0.852;AC=6;AF=0.107;AN=56;BaseQRankSum=7.237;DP=825;FS=3.682;HRun=0;HaplotypeScore=167.2955;InbreedingCoeff=-0.0553;MQ=58.02;MQ0=20;MQRankSum=-4.878;QD=5.68;ReadPosRankSum=1.505;VQSLOD=2.7068;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:36:5.73:6,0,394	0/1:6,1:7:6.88:68,0,7	0/0:49,0:24:56.06:0,56,643	0/0:66,0:15:45.14:0,45,553	0/0:26,0:25:66.22:0,66,1126	0/1:24,0:23:45.98:46,0,252	0/0:25,0:25:24.96:0,25,461	0/0:39,0:31:85.40:0,85,1041	0/0:26,0:26:53.16:0,53,991	0/0:37,0:36:99:0,102,1931	0/0:18,0:18:30.12:0,30,407	0/0:35,0:35:99:0,105,2065	0/0:20,0:20:60.20:0,60,1111	0/0:36,0:36:99:0,105,1952	0/1:18,17:35:99:450,0,141	0/0:34,0:34:63.21:0,63,1218	0/1:15,13:28:91.14:336,0,91	0/1:13,2:14:44.95:45,0,134	0/0:20,0:17:48.16:0,48,708	0/0:25,0:24:59.22:0,59,943	0/0:67,0:66:99:0,129,2303	0/0:20,0:20:60.18:0,60,1079	0/0:14,0:13:36.12:0,36,692	0/0:28,0:28:75.24:0,75,1358	0/0:25,0:25:66.18:0,66,1296	0/0:22,0:22:63.21:0,63,1263	0/0:33,0:33:99:0,99,1663	0/0:13,0:13:28.98:0,29,672
chr10	93165312	.	A	ACATC	3066.11	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.045;DP=859;FS=0.000;HRun=0;HaplotypeScore=199.3483;InbreedingCoeff=0.9687;MQ=59.12;MQ0=11;MQRankSum=-4.693;QD=34.84;ReadPosRankSum=1.422;VQSLOD=3.6834;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:32.10:0,32,637	1/1:4,1:5:5.97:86,6,0	0/0:63,0:36:39.83:0,40,555	0/0:65,0:24:24.05:0,24,312	0/0:27,0:26:57.19:0,57,936	0/0:28,0:27:47.99:0,48,669	0/0:24,0:24:39.05:0,39,610	0/0:46,0:43:84.15:0,84,1174	0/0:31,0:31:36.07:0,36,507	0/0:36,0:36:71.90:0,72,1134	0/0:21,0:21:38.93:0,39,580	0/0:34,0:34:78.24:0,78,1242	0/0:18,0:18:45.14:0,45,725	0/0:33,0:33:75.20:0,75,1165	1/1:20,17:37:72.16:1489,72,0	0/0:36,0:36:43.94:0,44,663	1/1:15,14:29:40.53:886,41,0	1/1:3,12:16:32.65:760,33,0	0/0:22,0:19:33.08:0,33,458	0/0:31,0:31:69.08:0,69,1018	0/0:61,0:60:99:0,108,1578	0/0:23,0:23:57.15:0,57,877	0/0:11,0:11:27.07:0,27,424	0/0:31,0:31:66.10:0,66,1038	0/0:24,0:24:57.18:0,57,907	0/0:27,0:27:57.17:0,57,897	0/0:29,0:29:78.17:0,78,1137	0/0:15,0:15:36.12:0,36,589
chr10	93165357	.	C	CATCT	5409.28	PASS	AB=0.914;AC=36;AF=0.720;AN=50;BaseQRankSum=-0.455;DP=748;FS=1.206;HRun=0;HaplotypeScore=165.6264;InbreedingCoeff=0.4586;MQ=59.61;MQ0=9;MQRankSum=-1.229;QD=10.75;ReadPosRankSum=-0.156;VQSLOD=4.5452;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:44,0:43:35.31:361,35,0	1/1:5,0:5:3.01:52,3,0	./.	./.	0/0:23,0:25:20.73:0,21,263	0/1:22,1:23:51.27:51,0,189	0/1:14,0:14:36.44:41,0,36	./.	0/0:30,0:30:14.12:0,14,496	1/1:24,12:36:33.06:640,33,0	1/1:21,0:23:10.57:145,11,0	1/1:16,14:31:27.09:624,27,0	1/1:18,0:18:5.79:62,6,0	1/1:30,0:30:21.03:272,21,0	1/1:19,15:33:33.11:762,33,0	0/0:36,0:36:48.12:0,48,664	1/1:21,1:25:18.06:343,18,0	0/1:15,1:16:99:181,0,157	1/1:22,1:21:8.39:147,8,0	0/0:29,0:29:20.98:0,21,282	1/1:41,6:46:4.67:745,5,0	1/1:13,0:21:8.73:156,9,0	1/1:13,2:19:5.72:118,6,0	1/1:29,0:31:15.03:204,15,0	1/1:17,1:29:11.97:204,12,0	0/0:26,0:25:33.09:0,33,460	0/1:17,8:25:99:253,0,157	1/1:8,0:8:3.01:48,3,0
chr10	93165706	.	T	TC	15350.98	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=20.225;DP=769;FS=17.079;HRun=1;HaplotypeScore=152.4882;InbreedingCoeff=0.9971;MQ=79.10;MQ0=0;MQRankSum=-6.315;QD=30.64;ReadPosRankSum=-0.493;VQSLOD=2.8281;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:56:99:0,169,2180	0/0:5,0:5:15.05:0,15,194	0/0:28,0:28:71.92:0,72,840	0/0:14,0:14:27.09:0,27,349	1/1:3,22:25:68.93:703,69,0	0/0:23,0:23:66.20:0,66,840	0/0:42,0:42:99:0,117,1518	1/1:13,25:38:99:1157,105,0	1/1:5,25:30:90.18:973,90,0	1/1:1,32:33:99:1117,99,0	1/1:0,14:14:33.02:347,33,0	1/1:2,28:29:87:894,87,0	1/1:2,22:24:72.07:733,72,0	1/1:6,31:37:99:1152,108,0	0/0:25,0:25:75.23:0,75,959	1/1:2,18:20:60.03:640,60,0	0/0:42,0:42:99:0,126,1582	0/0:24,0:24:72.15:0,72,883	1/1:5,8:13:36.52:371,37,0	1/1:7,18:25:72.70:721,73,0	1/1:5,49:54:99:1667,159,0	1/1:2,17:19:54.96:594,55,0	1/1:5,17:21:50.92:511,51,0	1/1:2,35:37:99:1143,102,0	1/1:1,23:24:69.01:741,69,0	1/1:2,31:33:99:1125,99,0	1/1:3,20:22:69.16:760,69,0	0/0:8,0:8:24.08:0,24,311
chr10	93165709	.	T	TG	16163.63	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=19.820;DP=759;FS=4.637;HRun=0;HaplotypeScore=143.9358;InbreedingCoeff=0.9982;MQ=76.25;MQ0=0;MQRankSum=-4.592;QD=32.59;ReadPosRankSum=1.334;VQSLOD=4.3770;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:58:99:0,177,2392	0/0:6,0:6:18.02:0,18,229	0/0:23,0:23:58.99:0,59,751	0/0:12,0:12:27.09:0,27,371	1/1:3,24:26:63.19:779,63,0	0/0:23,0:23:66.22:0,66,921	0/0:41,0:41:99:0,120,1677	1/1:11,24:35:99:1151,99,0	1/1:2,29:31:87.24:1058,87,0	1/1:3,31:34:96.27:1183,96,0	1/1:1,14:15:30.09:359,30,0	1/1:0,28:27:81.17:935,81,0	1/1:2,22:24:72.20:841,72,0	1/1:3,36:39:99:1319,108,0	0/0:26,0:26:78.22:0,78,1054	1/1:2,20:22:57.18:717,57,0	0/0:41,0:41:99:0,123,1698	0/0:24,0:24:72.24:0,72,1007	1/1:0,10:10:30.09:371,30,0	1/1:3,21:24:60.09:699,60,0	1/1:0,52:53:99:1639,135,0	1/1:2,18:20:51.14:625,51,0	1/1:4,17:20:42.10:493,42,0	1/1:0,37:37:99:1265,102,0	1/1:1,23:24:66.21:835,66,0	1/1:1,30:31:93.27:1144,93,0	1/1:1,20:20:63.15:749,63,0	0/0:8,0:8:24.08:0,24,335
chr10	93166833	.	TAC	T	2335.55	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.046;DP=907;FS=7.132;HRun=0;HaplotypeScore=138.8589;InbreedingCoeff=0.9830;MQ=53.36;MQ0=30;MQRankSum=0.545;QD=26.24;ReadPosRankSum=0.984;VQSLOD=4.9301;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:81.21:0,81,1324	1/1:3,10:13:30.10:389,30,0	0/0:42,0:9:9.19:0,9,276	0/0:48,0:19:43.35:0,43,615	0/0:29,0:29:86.95:0,87,1380	0/0:14,0:14:39.06:0,39,614	0/0:34,0:33:66.23:0,66,1093	0/0:34,0:27:54.18:0,54,900	0/0:32,0:32:84.27:0,84,1393	0/0:37,0:32:93.31:0,93,1505	0/0:19,0:19:39.13:0,39,662	0/0:42,0:42:99:0,117,1889	0/0:27,0:27:72.14:0,72,1132	0/0:36,0:36:90.31:0,90,1504	1/1:1,29:30:78.25:1013,78,0	0/0:18,0:18:48.14:0,48,784	1/1:2,17:19:30.05:530,30,0	1/1:6,21:27:45.10:564,45,0	0/0:25,0:17:39.10:0,39,615	0/0:34,0:34:87.30:0,87,1464	0/0:79,0:73:99:0,163,2665	0/0:37,0:37:99:0,102,1682	0/0:22,0:22:57.03:0,57,918	0/0:62,0:62:99:0,156,2577	0/0:26,0:25:63.22:0,63,1063	0/0:37,0:36:96.32:0,96,1595	0/0:28,0:28:78.23:0,78,1228	0/0:11,0:11:21.07:0,21,357
chr10	93166899	.	CACAT	C	1070.48	PASS	AB=0.963;AC=20;AF=0.357;AN=56;BaseQRankSum=4.921;DP=567;FS=22.592;HRun=0;HaplotypeScore=162.4160;InbreedingCoeff=-0.3979;MQ=53.88;MQ0=23;MQRankSum=-0.730;QD=2.88;ReadPosRankSum=8.257;VQSLOD=0.5696;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:43.49:43,0,102	0/0:13,0:13:31.50:0,31,255	0/0:28,0:3:2.98:0,3,21	0/0:33,0:12:12.89:0,13,146	0/1:18,0:18:24.72:25,0,128	0/0:11,0:11:16.28:0,16,341	0/0:20,0:20:50.89:0,51,937	0/1:29,0:28:48.05:48,0,225	0/1:20,0:20:46.55:86,0,47	0/1:14,0:13:33.19:33,0,174	0/1:8,0:7:2.11:2,0,38	0/1:22,1:22:83.62:88,0,84	0/1:14,0:14:78.61:79,0,114	0/1:18,1:19:83.43:83,0,144	0/0:29,0:28:61.31:0,61,492	0/1:13,2:15:63.22:63,0,64	0/0:20,0:20:36.54:0,37,258	0/0:19,0:17:39.89:0,40,265	1/1:9,0:7:9.87:67,10,0	0/0:22,0:22:6.21:0,6,111	0/1:43,0:42:99:110,0,142	0/1:17,0:17:8.90:9,0,83	0/1:7,1:8:11.05:65,0,11	0/1:36,0:36:99:163,0,128	0/1:7,8:14:6.42:6,0,42	0/1:19,0:19:89.83:90,0,111	0/1:17,0:17:36.19:36,0,113	0/1:17,0:17:89.13:134,0,89
chr10	93166903	.	TACAC	T	5097.48	PASS	AB=0.777;AC=39;AF=0.722;AN=54;BaseQRankSum=-4.070;DP=547;FS=10.223;HRun=0;HaplotypeScore=149.7081;InbreedingCoeff=0.4974;MQ=51.82;MQ0=24;MQRankSum=5.341;QD=12.17;ReadPosRankSum=5.268;VQSLOD=3.5367;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,20:32:5.33:210,5,0	0/0:6,0:13:3.41:0,3,53	./.	0/0:29,0:10:8.61:0,9,78	1/1:16,0:16:26.12:227,26,0	0/0:11,0:11:13.29:0,13,275	0/0:21,0:21:29.77:0,30,693	1/1:13,10:20:27.03:305,27,0	1/1:23,0:23:34.20:384,34,0	0/1:16,0:15:14.69:194,0,15	1/1:5,0:4:6.01:62,6,0	1/1:22,0:21:32.46:357,32,0	1/1:13,1:14:13.69:204,14,0	1/1:17,1:18:22.24:263,22,0	0/0:8,0:27:11.63:0,12,142	0/1:7,8:15:9.86:64,0,10	0/1:10,0:19:4.23:4,0,14	0/1:7,0:17:3.37:3,0,45	1/1:9,0:6:15.01:185,15,0	1/1:7,15:22:29.70:203,30,0	1/1:42,0:41:50.91:550,51,0	1/1:17,0:17:26.91:238,27,0	1/1:8,0:8:11.99:133,12,0	1/1:29,2:30:47.44:585,47,0	1/1:17,0:16:3.91:33,4,0	1/1:19,0:18:33.41:365,33,0	0/1:15,1:16:10.05:231,0,10	1/1:5,11:16:21:298,21,0
chr10	93166921	.	CACAT	C	1957.54	PASS	AB=0.992;AC=34;AF=0.607;AN=56;BaseQRankSum=-2.780;DP=462;FS=6.521;HRun=0;HaplotypeScore=156.0741;InbreedingCoeff=0.2581;MQ=42.87;MQ0=20;MQRankSum=0.946;QD=5.69;ReadPosRankSum=-3.384;VQSLOD=1.5027;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:1.65:0,2,51	0/1:8,0:8:12.69:13,0,61	0/0:12,0:1:3.01:0,3,55	0/0:15,0:2:2.98:0,3,21	1/1:9,0:9:8.34:52,8,0	0/0:10,0:10:12.47:0,12,70	0/0:27,0:27:27.50:0,28,492	1/1:15,0:11:11.03:67,11,0	1/1:21,2:23:36.84:265,37,0	0/1:13,1:14:8.85:203,0,9	0/1:3,0:2:11.93:12,0,12	1/1:19,0:18:23.59:168,24,0	1/1:9,1:10:13.03:94,13,0	1/1:15,0:15:16.06:132,16,0	0/1:28,0:27:22.38:22,0,246	1/1:13,1:14:12.47:120,12,0	0/1:16,0:16:42.58:43,0,107	0/0:16,0:15:28.39:0,28,274	0/1:12,0:8:41.26:85,0,41	1/1:16,1:17:3.16:9,3,0	0/1:42,0:36:99:206,0,131	1/1:17,1:16:13.29:69,13,0	1/1:9,0:9:8.29:61,8,0	0/1:22,0:21:10.22:137,0,10	1/1:18,0:18:8.69:57,9,0	1/1:14,1:13:28.61:202,29,0	1/1:16,1:15:10.36:122,10,0	0/0:11,0:11:9.34:0,9,28
chr10	93166925	.	TACAC	T	1198.17	PASS	AB=0.919;AC=34;AF=0.607;AN=56;BaseQRankSum=1.079;DP=441;FS=22.630;HRun=0;HaplotypeScore=151.2066;InbreedingCoeff=-0.0810;MQ=41.36;MQ0=25;MQRankSum=-4.089;QD=3.32;ReadPosRankSum=-2.955;VQSLOD=0.5734;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,3:28:6.35:35,6,0	1/1:8,0:8:0.10:3,0,0	0/0:11,0:1:3.01:0,3,70	0/0:14,0:2:3.01:0,3,37	1/1:7,1:8:1.26:21,1,0	1/1:10,0:10:0.29:3,0,0	0/0:15,0:22:17.73:0,18,404	1/1:15,0:10:5.24:29,5,0	0/1:20,4:24:54.47:163,0,54	0/1:13,2:15:59.90:197,0,60	0/1:4,0:3:9.14:9,0,34	0/1:11,7:17:43.99:58,0,44	1/1:11,0:11:4.85:40,5,0	0/1:11,1:12:19.92:26,0,20	0/1:28,0:27:19.43:19,0,53	0/1:12,2:14:4.99:86,0,5	0/1:16,0:16:4.55:5,0,31	0/0:15,0:14:10.59:0,11,112	0/1:14,1:9:81.98:115,0,82	1/1:13,1:14:5.78:34,6,0	0/1:43,0:35:61.37:61,0,263	1/1:14,2:14:8.74:73,9,0	0/1:10,0:10:15.46:16,0,15	0/0:18,0:17:8.94:0,9,50	1/1:14,3:17:11.69:115,12,0	0/1:11,2:11:33.72:86,0,34	1/1:10,3:11:5.07:140,5,0	1/1:8,0:8:4.87:20,5,0
chr10	93166943	.	CACAT	C	2558.25	PASS	AB=0.990;AC=42;AF=0.778;AN=54;BaseQRankSum=-3.300;DP=472;FS=9.729;HRun=0;HaplotypeScore=149.1628;InbreedingCoeff=-0.1310;MQ=40.82;MQ0=34;MQRankSum=3.373;QD=5.63;ReadPosRankSum=3.295;VQSLOD=2.1283;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:10.85:30,0,11	1/1:9,0:9:12.97:98,13,0	0/0:9,0:1:2.96:0,3,19	./.	1/1:10,0:10:5.04:33,5,0	1/1:10,0:10:0.80:40,1,0	0/1:22,0:21:10.97:11,0,143	0/1:25,0:15:64.56:65,0,127	1/1:26,1:27:9.62:297,10,0	0/1:19,0:19:16.75:234,0,17	0/1:8,1:7:14.64:68,0,15	1/1:15,0:14:8.95:68,9,0	1/1:16,0:16:6.09:45,6,0	1/1:10,1:11:14.63:144,15,0	1/1:27,0:24:27.13:278,27,0	1/1:15,1:16:0.83:52,1,0	1/1:17,0:17:18.19:138,18,0	0/1:15,0:13:8.67:103,0,9	0/1:22,0:15:31.88:163,0,32	0/1:10,0:10:1.16:2,0,1	0/1:52,0:43:40:100,0,40	1/1:16,2:16:8.14:46,8,0	1/1:10,0:10:4.20:38,4,0	0/1:19,0:18:0.66:101,0,1	1/1:17,0:17:7.53:75,8,0	1/1:12,1:10:25.55:261,26,0	1/1:14,2:13:8.54:132,9,0	1/1:4,0:4:11.78:73,12,0
chr10	93166945	.	CAT	C	4384.43	PASS	AB=0.929;AC=45;AF=0.833;AN=54;BaseQRankSum=-5.187;DP=486;FS=3.755;HRun=0;HaplotypeScore=136.0336;InbreedingCoeff=-0.0503;MQ=41.42;MQ0=34;MQRankSum=5.072;QD=9.37;ReadPosRankSum=4.352;VQSLOD=4.7324;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:11.21:30,0,11	1/1:9,0:9:15.61:97,16,0	0/0:9,0:1:2.96:0,3,19	./.	1/1:0,10:10:8.94:94,9,0	0/1:11,0:11:1.88:37,0,2	0/1:23,0:22:31.71:32,0,85	0/1:25,0:15:64.87:65,0,138	1/1:22,7:29:42.53:523,43,0	0/1:16,3:19:9.06:408,0,9	1/1:9,1:8:22.71:207,23,0	1/1:14,2:15:19.13:184,19,0	1/1:2,14:16:7.44:61,7,0	1/1:10,1:11:14.21:165,14,0	1/1:27,0:24:27.85:275,28,0	1/1:14,2:16:19.29:235,19,0	1/1:17,0:17:18.86:147,19,0	1/1:16,0:14:10.53:186,11,0	0/1:11,12:16:15.26:307,0,15	1/1:10,1:11:1.83:26,2,0	0/1:54,1:46:26.23:350,0,26	1/1:5,13:16:8.84:93,9,0	1/1:10,0:10:3.08:25,3,0	1/1:17,3:19:11.18:241,11,0	1/1:13,3:16:11.22:162,11,0	1/1:14,1:12:29.82:268,30,0	1/1:4,12:13:9.32:94,9,0	1/1:4,0:4:11.78:73,12,0
chr10	93168236	.	GAAA	G	1618.46	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.573;DP=581;FS=13.894;HRun=8;HaplotypeScore=113.6365;InbreedingCoeff=0.9531;MQ=73.59;MQ0=0;MQRankSum=-1.419;QD=28.39;ReadPosRankSum=3.570;VQSLOD=0.8975;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,105,2193	1/1:1,11:12:18.06:265,18,0	0/0:18,0:18:3.84:0,4,565	0/0:14,0:14:17.64:0,18,481	0/0:15,0:15:42.13:0,42,868	0/0:20,0:19:45.15:0,45,964	0/0:29,0:29:75.26:0,75,1628	0/0:31,0:31:81.18:0,81,1599	0/0:27,0:27:78.27:0,78,1692	0/0:31,0:31:87.28:0,87,1762	0/0:13,0:14:36.10:0,36,693	0/0:16,0:16:45.12:0,45,937	0/0:21,0:21:60.20:0,60,1258	0/0:24,0:24:63.22:0,63,1341	1/1:1,17:18:47.90:673,48,0	0/0:22,0:21:51.18:0,51,1112	1/1:1,12:13:27.09:397,27,0	1/1:0,14:14:30.10:442,30,0	0/0:17,0:17:45.10:0,45,858	0/0:29,0:28:60.21:0,60,1288	0/0:23,0:23:66.23:0,66,1430	0/0:21,0:20:48.16:0,48,963	0/0:11,0:11:30.10:0,30,630	0/0:26,0:28:78.27:0,78,1651	0/0:17,0:17:45.10:0,45,895	0/0:17,0:17:48.16:0,48,1046	0/0:30,0:27:75.20:0,75,1491	0/0:9,0:9:27.09:0,27,567
chr10	93168372	.	TTCC	T	3091.37	PASS	AB=0.970;AC=40;AF=0.714;AN=56;BaseQRankSum=-1.984;DP=465;FS=4.777;HRun=0;HaplotypeScore=114.7894;InbreedingCoeff=0.3194;MQ=53.52;MQ0=30;MQRankSum=0.255;QD=7.93;ReadPosRankSum=1.592;VQSLOD=2.4789;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,2:13:9.03:130,9,0	0/0:8,0:8:1.53:0,2,35	0/0:24,1:12:18.92:0,19,265	0/1:29,0:20:26.06:26,0,141	1/1:16,0:15:14.84:145,15,0	0/1:16,0:14:31.71:32,0,130	0/1:24,0:21:99:123,0,124	1/1:30,3:28:4.40:176,4,0	1/1:20,0:17:8.43:82,8,0	1/1:26,0:20:20.57:210,21,0	1/1:8,0:8:11.89:102,12,0	1/1:6,5:9:11.55:151,12,0	1/1:4,3:7:14.08:175,14,0	1/1:17,4:20:18.40:179,18,0	0/0:16,0:16:14.74:0,15,120	1/1:12,0:10:8.36:117,8,0	0/0:9,0:7:3.89:0,4,28	0/1:7,0:7:23.61:42,0,24	0/1:17,0:12:0.64:106,0,1	1/1:13,0:10:17.83:137,18,0	1/1:24,0:21:5.98:55,6,0	1/1:3,6:9:14.96:150,15,0	0/1:7,2:9:14.26:78,0,14	1/1:16,5:20:23.97:278,24,0	1/1:5,9:14:17.62:179,18,0	1/1:19,0:18:32.41:383,32,0	1/1:15,0:15:20.65:205,21,0	0/0:17,0:16:3.94:0,4,155
chr10	93168380	.	C	CTTT	4153.74	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=2.422;DP=433;FS=9.927;HRun=1;HaplotypeScore=104.5876;InbreedingCoeff=0.4628;MQ=43.97;MQ0=40;MQRankSum=-3.722;QD=16.29;ReadPosRankSum=4.504;VQSLOD=0.0404;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:8:1.13:0,1,43	0/1:6,0:5:2.38:5,0,2	0/0:30,0:9:26.76:0,27,424	0/1:42,0:18:22.55:23,0,340	1/1:4,7:10:18.03:312,18,0	0/0:17,1:15:30.01:0,30,455	0/0:25,0:20:44.66:0,45,588	0/0:32,0:25:63.81:0,64,856	1/1:3,12:12:12.04:293,12,0	1/1:8,13:14:35.90:605,36,0	1/1:1,5:7:12.04:255,12,0	0/1:12,0:10:8.02:8,0,91	0/0:6,0:6:11.25:0,11,133	0/1:19,0:18:52.49:52,0,53	0/1:12,0:12:20.66:21,0,54	1/1:5,5:7:12.04:263,12,0	0/0:8,0:7:5.10:0,5,27	0/0:6,0:6:3.48:0,3,24	1/1:13,6:9:21.07:379,21,0	1/1:9,3:9:21.03:376,21,0	1/1:7,5:13:8.99:131,9,0	0/1:8,0:8:3.42:3,0,120	0/0:8,0:8:9.46:0,9,192	0/0:15,0:13:29.96:0,30,291	0/1:14,0:14:16.50:16,0,136	1/1:5,15:18:48.08:938,48,0	1/1:3,7:10:21.07:475,21,0	0/0:15,0:14:33.08:0,33,487
chr10	93168382	.	TCC	T	526.55	PASS	AB=0.965;AC=22;AF=0.393;AN=56;BaseQRankSum=3.318;DP=418;FS=2.909;HRun=2;HaplotypeScore=108.1231;InbreedingCoeff=0.5514;MQ=41.85;MQ0=42;MQRankSum=-0.997;QD=2.76;ReadPosRankSum=2.585;VQSLOD=-0.6147;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:7:4.93:13,5,0	0/0:6,0:5:9.51:0,10,48	0/0:35,0:10:24.55:0,25,414	0/1:41,1:17:20.29:20,0,293	1/1:8,2:9:12.53:76,13,0	0/0:18,0:15:30:0,30,482	0/0:24,0:19:26.88:0,27,443	0/0:32,0:24:48.43:0,48,491	0/1:15,0:12:2.52:3,0,3	1/1:15,2:10:12.92:101,13,0	1/1:4,1:5:9.19:44,9,0	0/0:12,0:10:16.95:0,17,143	0/1:6,0:6:2.67:3,0,61	0/0:18,0:17:12.78:0,13,133	0/0:12,0:12:24.71:0,25,131	1/1:8,2:7:5.34:61,5,0	0/0:8,0:7:11.25:0,11,73	0/0:6,0:6:0.75:0,1,42	1/1:18,0:8:0.84:56,1,0	1/1:10,2:9:9.82:38,10,0	1/1:10,1:7:4.17:22,4,0	0/0:8,0:8:12.66:0,13,116	0/0:8,0:8:10.97:0,11,149	0/0:14,0:12:3.07:0,3,71	0/0:13,0:13:10.23:0,10,117	0/1:17,2:17:35.10:181,0,35	1/1:6,3:9:12.66:90,13,0	0/0:13,0:12:27.04:0,27,296
chr10	93168384	.	C	CTCT	4972.24	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=-1.871;DP=410;FS=13.208;HRun=0;HaplotypeScore=95.6587;InbreedingCoeff=0.4424;MQ=40.66;MQ0=45;MQRankSum=0.605;QD=16.57;ReadPosRankSum=2.755;VQSLOD=3.7474;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,5:7:9.02:148,9,0	0/0:6,0:5:5.12:0,5,25	0/0:36,0:10:26.59:0,27,297	0/0:45,0:16:5.74:0,6,153	1/1:9,0:8:14.99:207,15,0	0/1:18,0:15:44.61:53,0,45	0/1:24,0:19:78.74:85,0,79	1/1:30,0:22:14.02:261,14,0	1/1:15,0:12:12.04:229,12,0	1/1:17,0:10:23.82:282,24,0	1/1:5,0:5:12.01:193,12,0	1/1:9,1:9:20.43:322,20,0	1/1:6,0:6:18:219,18,0	1/1:6,12:17:9.19:469,9,0	0/0:10,0:10:18.74:0,19,86	1/1:10,0:7:12.04:192,12,0	0/1:8,0:7:6.66:7,0,24	0/1:6,0:6:14.21:17,0,14	1/1:18,0:8:17.95:219,18,0	1/1:12,0:9:17.97:246,18,0	1/1:12,0:7:5.98:73,6,0	0/1:8,0:8:1.25:203,0,1	0/1:8,0:8:4.13:110,0,4	1/1:13,0:11:23.99:274,24,0	1/1:11,0:11:17.73:321,18,0	1/1:17,0:15:13.57:494,14,0	1/1:8,0:8:21.06:348,21,0	0/0:13,0:12:26:0,26,177
chr10	93168437	.	CCTT	C	38.05	PASS	AB=0.949;AC=8;AF=0.211;AN=38;BaseQRankSum=1.397;DP=400;FS=1.336;HRun=0;HaplotypeScore=50.8611;InbreedingCoeff=-0.1191;MQ=17.43;MQ0=85;MQRankSum=1.468;QD=0.49;ReadPosRankSum=-3.659;VQSLOD=0.3059;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,5:3:2.84:0,3,14	./.	0/0:59,0:10:18.57:0,19,348	0/0:79,0:13:27.62:0,28,383	0/1:11,1:10:72.49:85,0,72	0/1:19,1:13:8.88:9,0,120	0/0:41,2:15:18.06:0,18,323	0/0:20,0:7:14.80:0,15,141	0/1:8,1:6:11.10:11,0,77	0/1:10,1:3:14.96:15,0,77	0/0:4,0:2:6.02:0,6,88	./.	./.	./.	./.	0/0:8,0:5:8.90:0,9,102	1/1:2,1:2:2.50:9,2,0	0/0:7,0:3:1.11:0,1,32	0/0:16,3:5:9.03:0,9,121	./.	0/0:21,0:13:20.46:0,20,225	./.	0/0:4,0:1:2.84:0,3,14	./.	./.	0/1:14,0:8:11.99:12,0,120	0/1:9,0:5:5.94:6,0,160	0/0:6,0:5:6:0,6,77
chr10	93168456	.	TTCC	T	88.10	PASS	AB=0.958;AC=12;AF=0.250;AN=48;BaseQRankSum=0.756;DP=477;FS=0.000;HRun=0;HaplotypeScore=53.2926;InbreedingCoeff=0.0620;MQ=17.38;MQ0=141;MQRankSum=1.206;QD=0.56;ReadPosRankSum=-2.719;VQSLOD=0.4255;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:6:3.90:46,4,0	0/0:3,0:2:5.58:0,6,27	0/0:33,0:6:6.02:0,6,94	0/0:48,0:7:8.85:0,9,96	0/1:14,0:11:16.78:17,0,54	0/1:25,2:17:20.78:21,0,213	0/0:57,0:20:26.34:0,26,186	0/0:42,0:9:13.42:0,13,117	0/1:15,0:7:18.52:19,0,57	0/0:14,0:4:10.84:0,11,64	0/0:5,0:3:6:0,6,52	1/1:5,0:2:2.04:6,2,0	./.	0/0:7,0:4:2.50:0,2,9	0/0:5,0:2:2.69:0,3,8	0/0:10,0:5:11.39:0,11,73	./.	1/1:10,0:4:6.01:61,6,0	0/1:30,1:9:23.50:23,0,68	0/0:10,0:7:5.88:0,6,44	0/0:37,0:15:14.18:0,14,101	./.	0/1:7,1:5:12:14,0,12	./.	0/0:5,0:3:3.35:0,3,16	0/1:22,1:13:11.98:12,0,50	0/0:12,0:7:7.07:0,7,134	0/0:7,0:6:2.98:0,3,23
chr10	93168474	.	T	TTCC	292.53	PASS	AB=0.961;AC=10;AF=0.200;AN=50;BaseQRankSum=2.622;DP=504;FS=0.000;HRun=0;HaplotypeScore=64.4086;InbreedingCoeff=0.0916;MQ=18.84;MQ0=136;MQRankSum=-1.021;QD=3.52;ReadPosRankSum=0.321;VQSLOD=1.1374;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:7:3.90:0,4,43	0/1:5,0:4:16.12:16,0,19	0/0:23,0:5:9.01:0,9,108	0/0:28,0:3:9.03:0,9,135	0/0:15,0:12:8.79:0,9,114	0/1:26,6:19:46.08:316,0,46	0/0:65,2:29:3.04:0,3,330	0/0:42,0:9:7.62:0,8,44	0/0:19,0:8:14.57:0,15,158	0/1:19,0:9:17.34:17,0,187	0/0:5,0:4:9.03:0,9,130	0/0:8,0:4:2.38:0,2,18	./.	1/1:6,0:4:0.47:1,0,0	0/1:7,0:3:25.71:39,0,26	0/0:16,0:8:12.01:0,12,150	1/1:4,0:2:2.04:6,2,0	1/1:10,0:3:3.15:11,3,0	0/0:33,0:14:26.53:0,27,380	0/0:14,0:11:0.81:0,1,44	0/0:36,0:15:12.30:0,12,101	0/0:9,0:6:4.19:0,4,21	0/0:9,0:7:8.78:0,9,52	./.	0/0:9,0:6:6.28:0,6,37	0/0:30,0:14:15.05:0,15,218	0/0:15,0:7:17.85:0,18,234	./.
chr10	93168489	.	T	TTCC	269.56	PASS	AB=0.983;AC=18;AF=0.360;AN=50;BaseQRankSum=1.653;DP=569;FS=3.508;HRun=0;HaplotypeScore=70.9202;InbreedingCoeff=-0.1380;MQ=19.90;MQ0=133;MQRankSum=-1.284;QD=0.91;ReadPosRankSum=-1.214;VQSLOD=1.4571;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:13:2.98:0,3,21	1/1:6,0:4:4.64:32,5,0	0/0:26,0:4:9.03:0,9,132	0/0:36,0:5:15.05:0,15,212	0/1:19,0:14:9.47:31,0,9	0/1:37,0:19:32.41:78,0,32	0/0:78,0:31:12.98:0,13,210	0/0:30,0:9:15.78:0,16,97	0/1:24,1:10:54.91:55,0,75	0/1:26,0:12:7.08:7,0,139	0/1:10,0:8:12.42:12,0,43	0/0:8,0:3:6.02:0,6,82	./.	./.	1/1:16,0:9:3:27,3,0	0/1:18,0:10:8.97:9,0,107	1/1:9,0:2:0.47:1,0,0	0/1:9,0:4:4.92:5,0,5	0/1:30,1:15:92.06:92,0,242	0/1:16,3:15:4.80:5,0,43	0/1:34,0:14:12.98:13,0,23	0/0:7,0:6:5.85:0,6,59	0/0:10,0:8:11.94:0,12,115	0/0:12,0:4:0:0,0,0	0/1:8,0:6:5.97:6,0,106	0/1:30,0:13:30.86:31,0,124	0/0:18,0:7:8.39:0,8,83	./.
chr10	93168624	.	CTCCTCG	C	114.60	PASS	AB=0.962;AC=11;AF=0.204;AN=54;BaseQRankSum=2.255;DP=738;FS=6.582;HRun=0;HaplotypeScore=73.8918;InbreedingCoeff=-0.0949;MQ=24.31;MQ0=222;MQRankSum=-1.187;QD=0.50;ReadPosRankSum=-0.878;VQSLOD=0.7201;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,1:14:14.14:14,0,243	0/1:11,0:10:20.56:21,0,149	0/0:37,0:4:4.93:0,5,75	0/0:41,0:10:15.31:0,15,380	0/0:14,2:10:16.28:0,16,342	0/1:48,0:27:0.91:1,0,465	0/0:77,0:27:3.19:0,3,1173	./.	0/1:26,0:8:66.24:66,0,109	0/0:37,1:17:20.80:0,21,323	1/1:11,1:5:3.01:38,3,0	0/0:28,0:15:9.03:0,9,225	0/0:21,0:6:3.01:0,3,35	0/0:18,0:10:3.01:0,3,65	0/0:23,0:6:3.01:0,3,31	0/0:19,0:6:6.02:0,6,165	1/1:22,0:8:0.42:1,0,0	0/0:20,0:10:3.95:0,4,56	0/0:18,1:3:2.98:0,3,22	0/1:15,4:11:11.95:14,0,12	0/0:57,0:17:8.96:0,9,216	0/0:18,0:11:5.85:0,6,51	0/0:13,0:8:5.96:0,6,111	0/0:31,0:15:3.01:0,3,89	0/1:23,0:16:74.52:75,0,167	0/1:34,1:13:2.74:3,0,458	0/0:11,0:3:3.01:0,3,78	0/0:10,0:4:3.01:0,3,40
chr10	93168660	.	C	CTCGTCT	268.20	PASS	AB=0.960;AC=10;AF=0.357;AN=28;BaseQRankSum=-0.555;DP=430;FS=2.741;HRun=0;HaplotypeScore=32.7151;InbreedingCoeff=0.0529;MQ=13.49;MQ0=176;MQRankSum=-1.230;QD=1.71;ReadPosRankSum=2.658;VQSLOD=1.1716;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,1:7:5.89:98,6,0	0/0:2,0:2:5.98:0,6,64	./.	0/0:16,0:5:6.02:0,6,103	0/1:10,1:3:57.71:58,0,92	0/1:17,0:8:29.18:62,0,29	0/1:37,1:10:91.52:92,0,121	./.	0/0:14,0:2:6.02:0,6,105	./.	0/0:6,1:4:2.88:0,3,66	0/1:23,0:10:7.80:9,0,8	1/1:17,0:7:4.26:46,4,0	./.	./.	./.	1/1:21,0:4:2.60:10,3,0	0/0:23,0:7:3.46:0,3,61	./.	./.	0/0:39,1:10:8.95:0,9,138	./.	./.	./.	./.	0/0:22,0:2:3.01:0,3,43	./.	./.
chr10	93169274	.	TTTC	T	1311.41	PASS	AB=0.893;AC=36;AF=0.750;AN=48;BaseQRankSum=-0.130;DP=174;FS=9.282;HRun=0;HaplotypeScore=73.1000;InbreedingCoeff=-0.0646;MQ=45.16;MQ0=8;MQRankSum=-0.768;QD=8.74;ReadPosRankSum=-1.092;VQSLOD=1.2333;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:3:0.31:0,0,1	0/1:5,0:7:58.26:58,0,69	0/0:15,0:1:3.01:0,3,38	0/1:10,0:4:8.85:9,0,19	1/1:3,1:6:5.80:41,6,0	1/1:12,2:15:24.37:216,24,0	1/1:10,0:7:3.94:106,4,0	0/1:2,0:1:0:0,0,0	1/1:3,0:2:5.91:38,6,0	0/1:7,1:6:9.15:73,0,9	./.	1/1:4,1:5:8.76:79,9,0	1/1:4,0:4:11.94:107,12,0	1/1:2,0:2:5.60:43,6,0	0/1:8,5:12:99:153,0,100	1/1:4,2:3:1.55:4,2,0	1/1:10,0:10:5.80:38,6,0	1/1:5,0:7:6.93:88,7,0	1/1:1,1:1:3.01:45,3,0	1/1:1,0:1:2.96:19,3,0	1/1:8,1:8:12.36:106,12,0	./.	./.	0/1:7,1:8:7.96:45,0,8	1/1:2,1:3:3.01:49,3,0	0/1:3,2:5:15.72:91,0,16	0/1:6,1:7:27.91:28,0,36	./.
chr10	93169275	.	TTC	T	223.28	PASS	AB=0.898;AC=24;AF=0.522;AN=46;BaseQRankSum=2.653;DP=175;FS=3.070;HRun=0;HaplotypeScore=76.0117;InbreedingCoeff=-0.0615;MQ=48.96;MQ0=8;MQRankSum=0.845;QD=1.76;ReadPosRankSum=-1.346;VQSLOD=1.3678;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:3:2.06:0,2,7	0/1:7,0:7:7.09:7,0,40	0/0:15,0:1:3.01:0,3,39	0/1:12,0:5:0.84:7,0,1	0/0:5,1:6:0.47:0,0,1	0/1:14,2:15:36.20:36,0,61	0/1:6,4:7:6.18:6,0,31	./.	0/0:3,0:2:0.94:0,1,2	1/1:8,2:6:1.98:30,2,0	./.	1/1:5,0:5:7.91:33,8,0	1/1:4,0:4:6.24:27,6,0	0/1:2,0:2:6.82:7,0,10	0/1:13,0:12:18.25:18,0,87	1/1:4,2:3:2.90:16,3,0	0/0:10,0:10:6.96:0,7,49	1/1:7,0:7:11.52:50,12,0	1/1:2,0:1:2.50:9,2,0	0/0:1,0:1:0.89:0,1,2	0/1:6,2:8:16.59:20,0,17	./.	./.	0/1:8,0:8:7.74:19,0,8	1/1:3,0:3:2.84:14,3,0	0/1:4,2:5:4.82:35,0,5	0/1:6,1:7:12.55:13,0,22	./.
chr10	93169277	.	C	CCT	354.65	PASS	AB=0.918;AC=24;AF=0.522;AN=46;BaseQRankSum=2.353;DP=211;FS=5.691;HRun=0;HaplotypeScore=97.4047;InbreedingCoeff=-0.1921;MQ=54.86;MQ0=11;MQRankSum=0.380;QD=2.32;ReadPosRankSum=-2.072;VQSLOD=1.4044;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:4:2.22:7,2,0	0/1:7,0:9:32.04:32,0,52	0/0:15,0:1:3.01:0,3,45	0/1:16,0:8:3.29:3,0,23	0/1:7,2:9:8.47:14,0,8	0/1:16,0:17:19.08:19,0,105	0/0:11,0:8:15.94:0,16,88	./.	0/1:6,0:5:12.05:12,0,31	0/1:11,3:9:9.74:117,0,10	./.	1/1:6,0:6:6.87:21,7,0	1/1:5,0:5:3.21:11,3,0	0/1:2,0:2:2.13:2,0,19	0/1:15,0:13:50.37:50,0,135	1/1:7,0:4:2.49:9,2,0	0/0:13,0:13:17.98:0,18,111	0/1:6,0:8:25.97:79,0,26	1/1:4,0:2:2.68:11,3,0	0/0:1,0:1:2.98:0,3,21	0/1:9,0:8:24.45:54,0,24	./.	./.	0/0:8,0:8:3.91:0,4,34	1/1:5,0:5:2.96:19,3,0	0/1:5,1:5:10.84:11,0,27	0/1:9,0:9:17.52:18,0,38	./.
chr10	93169292	.	TCCTCTA	T	4076.59	PASS	AB=0.854;AC=42;AF=0.808;AN=52;BaseQRankSum=-2.153;DP=289;FS=15.932;HRun=0;HaplotypeScore=125.9983;InbreedingCoeff=-0.1865;MQ=55.16;MQ0=18;MQRankSum=-0.789;QD=14.20;ReadPosRankSum=-2.335;VQSLOD=1.5072;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:5,3:7:15.36:253,0,15	0/1:7,2:9:40.57:135,0,41	0/1:25,0:4:0.07:0,0,52	0/1:24,0:13:51.44:51,0,128	1/1:7,2:9:11.41:157,11,0	1/1:16,2:18:38.56:456,39,0	1/1:16,0:12:14.61:147,15,0	1/1:6,0:1:2.50:9,2,0	1/1:6,4:9:27.03:372,27,0	0/1:14,2:11:32.52:139,0,33	./.	1/1:8,2:10:21.03:249,21,0	1/1:9,1:10:24.73:253,25,0	1/1:3,2:4:11.50:113,11,0	0/1:15,2:15:99:197,0,132	1/1:5,3:5:8.94:125,9,0	0/1:11,4:15:99:217,0,108	1/1:8,0:8:15.56:100,16,0	1/1:5,2:3:9.03:159,9,0	1/1:1,1:2:5.98:58,6,0	0/1:12,2:13:57.19:193,0,57	1/1:4,0:4:6:53,6,0	1/1:3,0:3:3.01:38,3,0	1/1:10,2:12:20.93:212,21,0	1/1:6,3:7:9.01:90,9,0	0/1:6,2:7:66.16:151,0,66	0/1:8,3:11:99:149,0,108	./.
chr10	93169295	.	TCTA	T	2814.26	PASS	AB=0.922;AC=42;AF=0.808;AN=52;BaseQRankSum=-0.887;DP=294;FS=13.558;HRun=0;HaplotypeScore=123.3129;InbreedingCoeff=-0.1552;MQ=54.80;MQ0=18;MQRankSum=-3.365;QD=10.54;ReadPosRankSum=-2.510;VQSLOD=2.2621;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,1:8:5.93:150,6,0	0/1:9,0:9:17.64:48,0,18	0/0:25,0:4:2.31:0,2,48	0/1:24,3:14:67.28:67,0,188	1/1:8,0:8:14.99:176,15,0	1/1:16,3:18:29.43:298,29,0	1/1:12,2:13:16.73:143,17,0	1/1:7,0:2:1.08:35,1,0	1/1:9,1:9:23.88:208,24,0	1/1:15,1:11:5.53:140,6,0	./.	1/1:8,2:10:21:267,21,0	1/1:7,3:10:19.08:261,19,0	1/1:5,0:4:11.73:105,12,0	0/1:13,4:15:60.29:123,0,60	1/1:7,1:5:8.39:77,8,0	0/1:14,1:15:63.16:63,0,69	0/1:8,1:8:10.62:57,0,11	1/1:6,1:3:6.82:49,7,0	1/1:2,0:2:3.90:40,4,0	0/1:14,1:14:25.17:147,0,25	1/1:3,1:4:5.90:38,6,0	1/1:1,2:3:3.01:38,3,0	1/1:11,1:12:20.81:180,21,0	1/1:6,3:7:8.15:61,8,0	0/1:7,1:7:31.32:100,0,31	0/1:11,0:11:80.52:82,0,81	./.
chr10	93169297	.	T	TTCTTCC	2111.47	PASS	AB=0.970;AC=30;AF=0.577;AN=52;BaseQRankSum=-0.456;DP=293;FS=14.515;HRun=0;HaplotypeScore=138.5971;InbreedingCoeff=-0.2877;MQ=54.90;MQ0=17;MQRankSum=-2.093;QD=8.25;ReadPosRankSum=-1.776;VQSLOD=1.3990;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:8:52.48:54,0,52	0/1:8,0:8:73.68:166,0,74	0/1:23,0:5:0.59:1,0,47	0/0:28,0:15:26.15:0,26,211	0/1:7,0:7:6.53:7,0,7	0/1:15,2:16:63.61:309,0,64	0/1:16,1:13:72.73:79,0,73	0/1:8,0:3:7.09:7,0,26	0/1:10,0:9:7.36:86,0,7	0/1:14,0:10:87.28:87,0,168	./.	1/1:8,0:10:17.77:178,18,0	1/1:10,0:10:2.44:181,2,0	1/1:5,0:4:8.78:60,9,0	0/1:17,0:15:99:118,0,258	0/1:8,0:5:1.53:26,0,2	0/1:15,0:15:84.41:84,0,142	1/1:9,0:8:5.28:211,5,0	1/1:7,0:3:8.99:82,9,0	0/0:2,0:2:2.88:0,3,15	0/1:13,2:15:41.29:89,0,41	1/1:4,0:4:6.02:75,6,0	0/0:3,0:3:0:0,0,0	0/1:10,2:12:9.42:150,0,9	1/1:9,0:7:5.77:52,6,0	0/1:8,0:7:52.64:105,0,53	0/1:11,0:11:51.50:51,0,184	./.
chr10	93169357	.	T	TTCC	15381.41	PASS	AB=0.901;AC=45;AF=0.804;AN=56;BaseQRankSum=-6.219;DP=619;FS=21.851;HRun=0;HaplotypeScore=137.0619;InbreedingCoeff=0.1420;MQ=33.89;MQ0=34;MQRankSum=1.471;QD=30.04;ReadPosRankSum=2.454;VQSLOD=3.3180;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:29:4.96:894,5,0	0/1:7,0:6:31.08:35,0,31	0/0:42,0:6:15.05:0,15,214	0/0:64,0:10:21.07:0,21,319	1/1:9,8:16:30.05:557,30,0	1/1:10,28:37:88.32:1986,88,0	1/1:9,44:48:96:2077,96,0	0/1:18,3:10:9.48:155,0,9	1/1:9,15:24:16.51:767,17,0	1/1:17,9:21:26.47:726,26,0	1/1:2,8:9:15.05:331,15,0	1/1:5,8:13:33.06:662,33,0	1/1:9,6:16:29.03:585,29,0	1/1:5,9:14:39.13:761,39,0	0/1:24,1:24:99:177,0,206	1/1:7,6:11:6.72:432,7,0	0/1:25,0:25:78.73:209,0,79	0/1:15,0:15:99:258,0,102	1/1:10,1:6:9.02:153,9,0	1/1:10,2:12:2.21:242,2,0	1/1:25,8:28:28.21:923,28,0	1/1:8,9:16:41.98:693,42,0	1/1:8,2:10:5.95:273,6,0	1/1:14,9:23:39.74:750,40,0	1/1:14,6:17:6.38:383,6,0	1/1:5,12:16:23.82:786,24,0	0/1:11,7:18:6.70:475,0,7	0/1:2,1:3:18.81:92,0,19
chr10	93169365	.	TCTC	T	117.42	PASS	AB=0.939;AC=7;AF=0.125;AN=56;BaseQRankSum=7.469;DP=635;FS=18.021;HRun=0;HaplotypeScore=182.4373;InbreedingCoeff=-0.1476;MQ=35.49;MQ0=35;MQRankSum=-6.780;QD=0.98;ReadPosRankSum=-2.507;VQSLOD=1.2679;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:58.02:0,58,1245	0/1:8,0:7:3.69:4,0,157	0/0:43,0:5:14.92:0,15,207	0/0:63,0:9:24.08:0,24,409	0/0:17,0:16:12.99:0,13,510	0/0:41,0:40:85.86:0,86,2024	0/0:55,0:50:75.31:0,75,1714	0/1:19,0:12:30.47:30,0,225	0/0:22,0:21:38.70:0,39,654	0/0:28,0:24:52.26:0,52,1135	0/0:9,0:8:15.05:0,15,356	0/0:16,0:15:27.81:0,28,743	0/1:14,1:14:27.05:27,0,386	0/0:17,0:17:48.16:0,48,1032	0/1:24,2:24:65.12:65,0,559	0/0:10,0:10:27.07:0,27,508	0/1:22,1:23:60.04:60,0,641	0/0:22,0:22:15.08:0,15,709	0/0:10,0:5:8.92:0,9,137	0/0:14,0:14:21.04:0,21,310	0/0:32,0:27:40.26:0,40,1143	0/0:17,0:16:44.74:0,45,875	0/0:11,0:11:19.15:0,19,315	0/1:25,0:25:7.11:7,0,804	0/0:21,0:17:27.11:0,27,428	0/0:18,0:17:2.03:0,2,535	0/0:17,0:17:39.04:0,39,728	0/1:2,1:3:46.75:47,0,91
chr10	93169516	.	CTCCTCT	C	10051.65	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=11.426;DP=683;FS=28.302;HRun=0;HaplotypeScore=147.4654;InbreedingCoeff=0.9477;MQ=48.94;MQ0=6;MQRankSum=-10.213;QD=28.80;ReadPosRankSum=0.440;VQSLOD=2.5749;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,124,3796	0/0:12,0:12:27.06:0,27,579	0/0:36,0:21:35.96:0,36,856	0/0:27,0:14:21.06:0,21,378	1/1:6,8:14:27.09:542,27,0	0/0:26,0:25:25.24:0,25,1514	0/0:46,0:46:95.35:0,95,3188	1/1:11,8:12:4.08:259,4,0	1/1:9,21:30:42.14:925,42,0	1/1:3,19:22:54.02:909,54,0	1/1:1,11:12:21.07:453,21,0	1/1:7,17:23:36.12:783,36,0	1/1:6,18:24:42.14:918,42,0	1/1:3,19:22:42.14:925,42,0	0/0:46,0:45:77.72:0,78,2062	1/1:5,11:16:11.94:264,12,0	0/0:44,0:44:96.36:0,96,2232	0/0:41,0:41:87.62:0,88,2130	1/1:4,12:12:32.97:504,33,0	1/1:3,6:9:15.05:305,15,0	1/1:17,4:21:12.98:415,13,0	1/1:0,17:17:39.13:828,39,0	1/1:4,5:9:27.07:505,27,0	1/1:8,36:44:24.08:526,24,0	1/1:6,15:21:12.04:255,12,0	1/1:8,11:19:26.83:540,27,0	1/1:3,7:10:9.03:198,9,0	0/0:4,0:4:12.04:0,12,405
chr10	93171510	.	C	CTT	1276.96	PASS	AB=0.715;AC=12;AF=0.214;AN=56;BaseQRankSum=4.575;DP=485;FS=14.914;HRun=11;HaplotypeScore=65.0145;InbreedingCoeff=0.7989;MQ=73.32;MQ0=1;MQRankSum=-0.309;QD=9.90;ReadPosRankSum=1.885;VQSLOD=0.4822;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:25:59.24:0,59,530	1/1:2,1:9:10.37:68,10,0	0/0:12,0:12:14.35:0,14,112	0/0:7,0:6:2.97:0,3,26	0/1:15,0:17:5.75:6,0,227	1/1:2,15:21:53.10:674,53,0	1/1:2,11:13:27.05:367,27,0	0/0:26,0:26:50.91:0,51,465	0/0:19,0:20:38.70:0,39,361	0/0:27,0:29:65.47:0,65,606	0/0:26,0:27:71.80:0,72,669	0/0:16,0:17:35.69:0,36,326	0/0:16,0:16:35.99:0,36,338	0/0:10,0:10:24:0,24,233	0/1:2,0:15:1.08:58,0,1	0/0:7,0:8:20.77:0,21,186	1/1:6,0:27:21.79:145,22,0	1/1:5,0:27:21.32:134,21,0	0/0:17,0:17:31.40:0,31,318	0/0:30,0:31:74.81:0,75,700	0/0:4,0:4:9.01:0,9,87	0/0:9,0:9:24.02:0,24,233	0/0:15,0:16:41.73:0,42,389	0/0:6,0:7:17.75:0,18,157	0/0:14,0:15:32.71:0,33,302	0/0:19,0:21:41.46:0,41,373	0/0:21,0:21:47.93:0,48,465	0/0:17,0:18:35.96:0,36,399
chr10	93172600	.	T	TA	16766.85	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=-8.144;DP=649;FS=4.577;HRun=8;HaplotypeScore=57.2581;InbreedingCoeff=0.9479;MQ=64.43;MQ0=0;MQRankSum=0.599;QD=28.37;ReadPosRankSum=1.123;VQSLOD=5.4101;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,38:45:99:1162,102,0	1/1:4,9:13:27.08:312,27,0	0/0:7,0:7:4.45:0,4,47	./.	1/1:2,30:32:84.21:955,84,0	0/0:19,0:19:54.03:0,54,494	0/0:26,0:26:66.03:0,66,604	1/1:5,27:32:81.24:934,81,0	1/1:3,20:23:60.18:692,60,0	1/1:5,22:27:41.74:734,42,0	1/1:2,17:19:45.13:518,45,0	1/1:4,21:25:60.18:689,60,0	1/1:3,20:23:48.14:554,48,0	1/1:1,23:24:66.20:762,66,0	1/1:3,15:18:39.12:450,39,0	1/1:1,14:15:33.10:381,33,0	1/1:1,16:17:39.12:450,39,0	1/1:1,28:29:75.22:864,75,0	1/1:7,14:21:47.16:516,47,0	1/1:4,30:34:87.26:1004,87,0	1/1:3,19:22:51.15:589,51,0	1/1:4,21:25:69.19:783,69,0	1/1:2,22:24:35.72:665,36,0	1/1:5,22:26:41.74:734,42,0	1/1:2,25:26:75.22:866,75,0	1/1:2,22:24:66.18:750,66,0	1/1:3,27:30:78.19:885,78,0	1/1:0,15:15:45.13:518,45,0
chr10	93175591	.	T	TACAC	8639.64	PASS	AB=0.697;AC=26;AF=0.464;AN=56;BaseQRankSum=-6.511;DP=717;FS=1.296;HRun=0;HaplotypeScore=128.9486;InbreedingCoeff=0.6599;MQ=56.89;MQ0=9;MQRankSum=0.230;QD=23.41;ReadPosRankSum=-4.230;VQSLOD=4.0762;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:54:65.48:0,65,1448	0/0:16,0:19:38.18:0,38,593	1/1:28,0:5:2.60:10,3,0	0/1:34,0:9:8.60:9,0,22	1/1:3,18:25:38.87:887,39,0	0/1:7,0:20:61.16:61,0,70	0/1:7,0:28:58.17:58,0,116	0/0:29,0:31:51.61:0,52,741	1/1:5,13:23:38.34:767,38,0	1/1:7,21:31:68.87:1302,69,0	1/1:7,14:23:32.85:742,33,0	0/0:17,0:18:20.51:0,21,463	0/0:21,0:23:42.14:0,42,664	0/0:16,0:16:30.10:0,30,487	0/0:16,0:18:48.14:0,48,715	1/1:7,14:22:27.09:657,27,0	0/0:32,0:35:80.58:0,81,1322	0/0:28,0:28:27.18:0,27,746	1/1:7,5:14:29.61:418,30,0	1/1:6,18:26:35.62:785,36,0	0/1:11,17:30:52.33:833,0,52	0/0:19,0:21:45.13:0,45,687	0/0:26,0:27:63.20:0,63,1001	0/0:24,0:28:3.66:0,4,672	0/0:28,0:29:63.18:0,63,959	1/1:8,17:30:71.68:1346,72,0	1/1:6,20:28:32.64:619,33,0	1/1:2,3:5:6.02:146,6,0
chr10	93175824	.	C	CT	3492.90	PASS	AC=44;AF=0.846;AN=52;BaseQRankSum=-7.363;DP=283;FS=49.896;HRun=2;HaplotypeScore=36.2590;InbreedingCoeff=0.6535;MQ=49.42;MQ0=4;MQRankSum=-7.309;QD=17.29;ReadPosRankSum=1.109;VQSLOD=0.6084;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:14.91:159,15,0	1/1:0,9:9:14.72:91,15,0	0/0:9,0:7:20.94:0,21,242	0/0:7,0:3:8.98:0,9,103	./.	0/0:21,0:21:60.20:0,60,835	0/0:28,0:27:72.16:0,72,913	1/1:0,15:15:45.13:672,45,0	1/1:1,4:5:5.84:34,6,0	1/1:0,9:9:24.06:357,24,0	1/1:0,11:11:2.92:17,3,0	1/1:0,11:11:14.78:110,15,0	1/1:0,9:9:14.74:92,15,0	1/1:0,9:9:3.01:48,3,0	1/1:0,13:13:8.83:54,9,0	1/1:0,4:4:5.88:36,6,0	1/1:0,7:7:8.85:56,9,0	1/1:0,7:7:11.99:153,12,0	1/1:1,8:8:24.08:380,24,0	1/1:0,11:11:11.85:103,12,0	1/1:2,7:7:3.01:48,3,0	./.	1/1:0,13:13:2.88:48,3,0	1/1:0,2:2:2.92:17,3,0	1/1:0,11:11:6.02:76,6,0	1/1:0,11:11:33.07:498,33,0	1/1:0,12:12:24.01:343,24,0	1/1:0,4:4:11.88:105,12,0
chr10	93176011	.	G	GA	55.95	PASS	AB=0.769;AC=5;AF=0.63;AN=8;BaseQRankSum=-0.914;DP=63;FS=2.027;HRun=0;HaplotypeScore=52.2608;MQ=84.43;MQ0=19;MQRankSum=0.433;QD=1.51;ReadPosRankSum=-1.684;VQSLOD=1.4816;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	1/1:13,0:4:2.44:7,2,0	0/0:12,0:5:1.86:0,2,12	./.	1/1:4,10:13:1.83:108,2,0	0/1:7,3:10:10.62:11,0,43	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	93176031	.	C	CTTT	1816.51	PASS	AC=34;AF=0.810;AN=42;BaseQRankSum=3.355;DP=136;FS=21.468;HRun=0;HaplotypeScore=69.8450;InbreedingCoeff=0.6131;MQ=100.66;MQ0=5;MQRankSum=-3.355;QD=34.93;ReadPosRankSum=-1.958;VQSLOD=1.7302;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,1:5:7.24:126,7,0	./.	0/0:24,0:12:30.09:0,30,457	0/0:25,0:17:37.84:0,38,649	1/1:1,0:1:3.01:58,3,0	0/0:16,0:15:36.12:0,36,668	0/0:17,0:17:42.14:0,42,781	1/1:4,0:4:12.03:170,12,0	1/1:1,0:1:3.01:48,3,0	1/1:4,1:5:12.04:202,12,0	1/1:3,1:5:9.03:170,9,0	1/1:2,0:2:5.99:78,6,0	./.	./.	1/1:1,0:1:3.01:48,3,0	./.	1/1:4,0:4:7.58:94,8,0	1/1:4,0:4:8.02:149,8,0	./.	1/1:4,0:4:12.04:213,12,0	1/1:4,0:4:3.01:57,3,0	./.	1/1:1,0:1:3.01:47,3,0	1/1:2,0:2:6.01:76,6,0	1/1:4,0:4:12.04:210,12,0	1/1:2,0:2:6.02:97,6,0	1/1:3,0:3:9:119,9,0	./.
chr10	93176127	.	G	GA	639.68	PASS	AB=0.736;AC=5;AF=0.089;AN=56;BaseQRankSum=8.499;DP=618;FS=116.811;HRun=0;HaplotypeScore=90.9418;InbreedingCoeff=-0.1036;MQ=42.32;MQ0=40;MQRankSum=-7.755;QD=6.73;ReadPosRankSum=1.433;VQSLOD=0.4308;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:21.03:0,21,271	0/1:3,7:10:5.95:6,0,36	0/0:46,0:10:23.69:0,24,270	0/0:36,0:13:18.95:0,19,234	0/0:20,19:39:12:0,12,143	0/0:10,2:11:18.06:0,18,251	0/0:19,3:23:35.96:0,36,435	0/0:16,0:15:45.08:0,45,586	0/0:8,1:8:18.06:0,18,251	0/1:28,13:38:99:519,0,672	0/0:16,18:35:21.03:0,21,271	0/0:15,0:15:39.13:0,39,544	0/0:12,0:11:33.02:0,33,417	0/0:13,1:13:30.06:0,30,397	0/0:15,0:14:42.05:0,42,542	0/0:14,0:14:38.95:0,39,520	0/0:11,0:11:33.02:0,33,417	0/0:7,0:6:18.06:0,18,252	0/0:8,0:6:18.06:0,18,252	0/0:22,25:50:6.62:0,7,351	0/0:15,0:11:18.06:0,18,252	0/0:18,15:32:14.97:0,15,167	0/0:16,15:32:25.33:0,25,338	0/0:9,0:7:17.98:0,18,209	0/0:23,24:47:11.75:0,12,373	0/1:15,4:19:99:162,0,493	0/1:17,2:17:36.52:37,0,388	0/1:2,4:6:29.10:29,0,78
chr10	93178492	.	CT	C	315.96	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=1.677;DP=452;FS=9.710;HRun=9;HaplotypeScore=103.8371;InbreedingCoeff=0.6183;MQ=55.33;MQ0=20;MQRankSum=-1.201;QD=12.64;ReadPosRankSum=-2.512;VQSLOD=1.9924;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,9:14:39.01:347,39,0	0/0:5,0:5:8.99:0,9,89	0/0:46,0:10:0.10:0,0,163	0/0:50,0:11:7.14:0,7,94	0/0:24,0:24:45.56:0,46,380	0/0:16,0:16:39.75:0,40,274	0/0:12,0:12:22.70:0,23,138	0/0:26,0:22:47.32:0,47,374	0/1:7,0:7:0.45:0,0,72	0/0:24,0:24:61.63:0,62,482	0/0:11,0:11:29.79:0,30,227	0/0:14,0:14:22.01:0,22,180	0/0:10,0:10:23.32:0,23,119	0/0:8,0:8:20.27:0,20,150	0/0:12,0:12:27.63:0,28,149	0/0:7,0:7:0.78:0,1,63	0/0:25,0:24:44.53:0,45,237	0/0:9,0:8:13.75:0,14,71	0/0:16,0:14:29.65:0,30,250	0/0:14,0:14:39.65:0,40,316	0/0:12,0:12:17.59:0,18,148	0/0:13,0:13:27.76:0,28,150	0/0:17,0:17:38.86:0,39,271	0/0:15,0:15:31.10:0,31,172	0/0:20,1:21:19.45:0,19,299	0/0:9,0:9:26.42:0,26,211	0/0:11,0:11:25:0,25,144	1/1:4,0:3:9:81,9,0
chr10	93178502	.	GT	G	7115.89	PASS	AB=0.845;AC=51;AF=0.911;AN=56;BaseQRankSum=-5.997;DP=440;FS=18.352;HRun=9;HaplotypeScore=79.5779;InbreedingCoeff=0.0713;MQ=55.06;MQ0=21;MQRankSum=2.337;QD=16.17;ReadPosRankSum=6.042;VQSLOD=3.6054;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,9:16:44.97:396,45,0	1/1:3,1:4:6:54,6,0	0/1:44,0:9:27.29:27,0,113	0/1:49,1:11:0.94:1,0,65	1/1:9,17:26:17.02:468,17,0	1/1:2,13:15:36.02:328,36,0	1/1:0,10:10:29.96:264,30,0	1/1:5,23:26:66.01:592,66,0	0/1:6,3:9:1.85:121,0,2	1/1:6,18:24:45.65:495,46,0	1/1:2,8:10:7.31:191,7,0	1/1:4,9:12:27.01:247,27,0	1/1:0,10:10:27.01:247,27,0	1/1:3,6:9:20.91:181,21,0	1/1:3,10:13:33.01:301,33,0	0/1:5,1:6:8.80:43,0,9	1/1:3,17:19:48.02:436,48,0	1/1:4,8:11:18.01:209,18,0	1/1:4,8:10:24.01:220,24,0	1/1:4,9:13:29.95:265,30,0	1/1:2,8:10:21.01:192,21,0	1/1:0,12:12:36.02:328,36,0	1/1:1,13:14:39.02:357,39,0	1/1:0,12:12:36.01:326,36,0	1/1:8,11:19:42.01:382,42,0	0/1:6,8:14:43.28:183,0,43	1/1:1,9:10:26.96:238,27,0	1/1:3,0:3:6.60:23,7,0
chr10	93178506	.	T	TTTTTG	2235.05	PASS	AB=0.965;AC=26;AF=0.464;AN=56;BaseQRankSum=-4.654;DP=433;FS=0.000;HRun=0;HaplotypeScore=121.7258;InbreedingCoeff=-0.4520;MQ=55.27;MQ0=21;MQRankSum=1.572;QD=5.73;ReadPosRankSum=-8.013;VQSLOD=-0.3082;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:9.62:10,0,237	0/0:3,0:3:4.72:0,5,16	0/1:42,0:9:14.45:14,0,130	0/1:48,0:11:5.14:5,0,72	0/1:22,1:26:35.25:248,0,35	0/0:13,0:13:1.81:0,2,81	0/1:10,0:10:30.60:31,0,40	0/1:26,0:24:27.27:183,0,27	1/1:8,1:9:4.89:186,5,0	0/1:18,4:23:1.75:478,0,2	1/1:8,1:10:4.73:187,5,0	0/1:12,0:11:25.12:25,0,59	0/1:11,0:11:5.79:6,0,80	0/1:9,0:9:10.21:10,0,37	0/1:14,0:14:50.16:50,0,66	1/1:3,2:6:14.86:255,15,0	0/1:20,0:19:51.52:93,0,52	0/1:14,0:13:7.08:7,0,31	0/1:11,0:8:12.69:54,0,13	0/1:12,1:12:28.65:90,0,29	0/0:9,0:9:15.54:0,16,46	0/1:13,0:13:19.61:20,0,105	0/1:13,0:13:33.16:130,0,33	0/0:13,0:13:5.38:0,5,74	0/1:20,0:20:42.54:43,0,104	0/1:10,0:14:8.68:117,0,9	0/1:9,1:10:9.57:146,0,10	0/0:5,0:3:2.32:0,2,51
chr10	93178519	.	TTTTTG	T	2346.77	PASS	AB=0.708;AC=25;AF=0.481;AN=52;BaseQRankSum=-3.513;DP=389;FS=3.767;HRun=0;HaplotypeScore=113.8410;InbreedingCoeff=0.7755;MQ=50.36;MQ0=16;MQRankSum=-1.887;QD=14.67;ReadPosRankSum=-0.437;VQSLOD=2.7401;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,1:16:42.14:0,42,1050	1/1:2,0:2:3.01:54,3,0	./.	0/0:37,0:5:2.68:0,3,11	0/0:24,0:26:35.88:0,36,590	1/1:9,0:12:9.03:104,9,0	1/1:8,0:11:6.01:61,6,0	0/0:33,0:30:26.92:0,27,293	0/0:8,0:9:20.88:0,21,310	0/0:13,0:17:27.08:0,27,568	0/0:7,0:8:5.89:0,6,80	1/1:7,3:9:9.03:163,9,0	1/1:7,3:10:15.05:271,15,0	1/1:7,1:8:9.03:149,9,0	1/1:8,2:10:12.04:217,12,0	0/0:4,0:6:18.03:0,18,281	1/1:18,0:18:15.05:232,15,0	0/1:10,7:16:14.98:35,0,15	0/0:12,0:9:9.01:0,9,187	0/0:9,0:10:12.04:0,12,297	0/0:9,0:9:11.99:0,12,170	1/1:7,6:13:24.08:413,24,0	1/1:13,2:15:12.04:203,12,0	1/1:13,3:16:15.05:243,15,0	1/1:14,3:17:24.05:401,24,0	0/0:12,0:12:24.05:0,24,399	0/0:8,0:9:12.04:0,12,297	./.
chr10	93178524	.	G	GT	618.71	PASS	AB=0.841;AC=11;AF=0.196;AN=56;BaseQRankSum=1.957;DP=376;FS=4.070;HRun=5;HaplotypeScore=91.7169;InbreedingCoeff=-0.2335;MQ=49.38;MQ0=14;MQRankSum=-1.493;QD=4.45;ReadPosRankSum=1.092;VQSLOD=-0.3379;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:45.13:0,45,510	0/1:1,2:3:26.45:32,0,26	0/0:7,0:2:3.48:0,3,30	0/0:34,0:4:1.25:0,1,2	0/0:25,0:25:59.10:0,59,625	0/0:14,0:14:20.58:0,21,278	0/0:9,1:10:5.93:0,6,193	0/0:31,0:28:69.16:0,69,733	0/0:9,0:9:22.85:0,23,222	0/0:16,0:16:40.35:0,40,380	0/0:7,0:7:13.84:0,14,133	0/1:8,0:9:10.18:10,0,120	0/1:8,1:9:57.64:58,0,100	0/1:5,3:8:73.11:73,0,115	0/1:8,3:11:49.47:49,0,142	0/0:6,0:6:16.66:0,17,133	0/1:15,4:19:99:112,0,298	0/1:17,0:16:10.95:11,0,222	0/0:12,0:9:23.93:0,24,240	0/0:11,0:10:25.88:0,26,277	0/0:11,0:10:30.04:0,30,320	0/1:13,1:14:99:125,0,101	0/1:10,2:12:52.14:52,0,144	0/1:16,2:18:99:127,0,261	0/1:11,7:17:99:113,0,165	0/0:12,0:12:33.09:0,33,362	0/0:8,0:8:16.86:0,17,175	0/0:4,0:2:6.02:0,6,74
chr10	93178654	.	T	TTCTCTCTCTCTCTC	3943.40	PASS	AB=0.882;AC=41;AF=0.891;AN=46;BaseQRankSum=-3.812;DP=290;FS=2.287;HRun=0;HaplotypeScore=102.9804;InbreedingCoeff=0.0387;MQ=49.44;MQ0=13;MQRankSum=0.259;QD=17.07;ReadPosRankSum=1.070;VQSLOD=2.2534;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:11:14.79:139,15,0	1/1:0,0:4:3.01:119,3,0	./.	./.	1/1:11,0:10:6.01:76,6,0	0/1:11,0:14:47.26:96,0,47	0/1:11,0:14:11.74:117,0,12	1/1:25,0:24:17.90:165,18,0	./.	1/1:8,0:7:9.03:235,9,0	1/1:10,0:11:9.02:217,9,0	1/1:3,0:3:3.01:91,3,0	1/1:8,0:8:8.92:130,9,0	1/1:2,4:8:3.01:198,3,0	./.	1/1:3,0:3:8.96:167,9,0	1/1:13,0:13:5.51:81,6,0	1/1:13,0:12:11.98:329,12,0	1/1:9,0:6:12.04:295,12,0	1/1:8,0:8:5.20:98,5,0	./.	1/1:10,0:9:5.85:55,6,0	1/1:14,0:13:21.04:392,21,0	1/1:10,0:8:2.89:73,3,0	0/1:13,0:11:1.61:47,0,2	1/1:12,0:11:18.06:526,18,0	1/1:7,0:6:12.04:296,12,0	0/0:8,0:8:2.97:0,3,21
chr10	93178717	.	T	TC	545.59	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-0.751;DP=178;FS=4.265;HRun=1;HaplotypeScore=48.0367;InbreedingCoeff=0.4153;MQ=29.30;MQ0=22;MQRankSum=-2.261;QD=7.27;ReadPosRankSum=-0.784;VQSLOD=0.4688;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:32.70:0,33,317	1/1:1,0:1:3.01:30,3,0	0/0:30,0:5:8.95:0,9,79	0/0:28,0:3:5.99:0,6,61	0/0:3,0:3:3.85:0,4,11	0/0:5,0:5:15.01:0,15,154	0/0:13,0:13:38.87:0,39,388	1/1:1,0:2:3:25,3,0	1/1:7,0:7:14:112,14,0	0/1:7,0:5:1.92:48,0,2	1/1:5,0:4:5.91:38,6,0	1/1:0,5:5:2.80:13,3,0	1/1:1,0:1:2.94:18,3,0	0/1:6,0:6:0.06:14,0,0	1/1:0,1:1:2.80:13,3,0	0/1:3,0:3:2.94:42,0,3	1/1:5,0:5:3.15:45,3,0	0/1:7,0:7:0.26:52,0,0	1/1:4,0:2:5.97:62,6,0	0/1:5,0:5:1.22:1,0,6	0/1:1,0:1:0:0,0,0	1/1:4,0:4:8.83:55,9,0	1/1:5,0:5:11.58:65,12,0	0/0:5,0:3:4.54:0,5,17	1/1:1,0:1:2.68:11,3,0	0/1:3,0:3:3.13:10,0,3	1/1:2,0:2:5.98:51,6,0	0/0:5,0:3:6.02:0,6,77
chr10	93178734	.	CTTT	C	308.43	PASS	AB=0.915;AC=5;AF=0.089;AN=56;BaseQRankSum=4.222;DP=210;FS=1.248;HRun=3;HaplotypeScore=41.3779;InbreedingCoeff=0.0210;MQ=39.03;MQ0=12;MQRankSum=0.846;QD=9.07;ReadPosRankSum=2.746;VQSLOD=-0.2502;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,3:13:36.80:37,0,222	1/1:3,0:2:1.25:3,1,0	0/0:21,1:4:10.09:0,10,86	0/0:11,0:1:3.01:0,3,39	0/0:4,0:4:0.53:0,1,69	0/1:4,0:4:65.05:80,0,65	0/1:13,1:14:46.48:289,0,46	0/0:9,0:6:15.05:0,15,193	0/0:7,0:7:20.99:0,21,233	0/0:8,0:8:17.56:0,18,206	0/0:6,0:5:9.03:0,9,115	0/0:10,0:10:21.03:0,21,252	0/0:3,0:3:8.93:0,9,79	0/0:6,0:6:14.91:0,15,165	0/0:6,0:6:14.72:0,15,165	0/0:4,0:4:9.02:0,9,104	0/0:10,0:10:23.99:0,24,276	0/0:9,0:8:20.85:0,21,218	0/0:6,0:5:12.01:0,12,137	0/0:10,0:9:17.69:0,18,186	0/0:3,0:3:8.99:0,9,94	0/0:8,0:8:24.05:0,24,282	0/0:1,0:1:3.01:0,3,39	0/0:10,0:10:11.85:0,12,136	0/0:8,0:7:11.73:0,12,109	0/0:3,0:3:9.03:0,9,116	0/0:6,0:5:12.04:0,12,153	0/0:4,0:3:6.02:0,6,148
chr10	93179664	.	A	AAGCC	2458.59	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.078;DP=673;FS=0.652;HRun=0;HaplotypeScore=113.1428;InbreedingCoeff=0.9916;MQ=89.67;MQ0=0;MQRankSum=-2.035;QD=58.54;ReadPosRankSum=0.365;VQSLOD=5.2684;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,153,2670	0/0:6,0:6:15.05:0,15,273	0/0:27,0:27:69.21:0,69,1160	0/0:23,0:23:44.83:0,45,863	0/0:16,0:16:42.12:0,42,706	1/1:1,13:15:36.12:942,36,0	1/1:5,22:27:63.22:1638,63,0	0/0:28,0:28:72.25:0,72,1307	0/0:35,0:35:96.28:0,96,1677	0/0:24,0:24:57.20:0,57,1032	0/0:18,0:18:51.16:0,51,899	0/0:22,0:22:60.21:0,60,1091	0/0:18,0:18:51.17:0,51,915	0/0:22,0:22:60.21:0,60,1091	0/0:35,0:35:90.31:0,90,1636	0/0:14,0:14:42.14:0,42,757	0/0:32,0:32:90.31:0,90,1637	0/0:18,0:18:45.15:0,45,809	0/0:18,0:18:45.15:0,45,812	0/0:16,0:16:39.13:0,39,681	0/0:60,0:60:99:0,169,3012	0/0:27,0:27:75.26:0,75,1349	0/0:24,0:24:66.20:0,66,1124	0/0:17,0:17:51.16:0,51,897	0/0:15,0:15:39.13:0,39,709	0/0:28,0:28:66.23:0,66,1200	0/0:20,0:20:48.16:0,48,845	0/0:11,0:11:33.11:0,33,600
chr10	93180902	.	C	CA	16978.34	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-10.409;DP=567;FS=10.252;HRun=1;HaplotypeScore=61.6493;InbreedingCoeff=0.9853;MQ=74.90;MQ0=0;MQRankSum=-2.505;QD=40.62;ReadPosRankSum=-1.269;VQSLOD=4.2921;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1464	0/0:4,0:4:12.04:0,12,156	0/0:9,0:9:27.09:0,27,345	0/0:19,0:18:36.18:0,36,489	1/1:0,9:9:24.08:360,24,0	1/1:1,16:17:48.16:719,48,0	1/1:1,26:27:75.25:1124,75,0	1/1:1,17:18:51.14:718,51,0	1/1:0,23:23:69.23:1034,69,0	1/1:1,22:23:66.08:912,66,0	1/1:0,17:17:42.14:629,42,0	1/1:1,29:30:84.28:1258,84,0	1/1:1,18:19:51.17:764,51,0	1/1:0,31:31:84.28:1258,84,0	0/0:16,0:16:45.10:0,45,565	1/1:0,18:18:51.17:764,51,0	0/0:37,0:37:99:0,111,1417	0/0:24,0:24:66.21:0,66,854	1/1:1,19:20:49.51:695,50,0	1/1:2,12:14:36.07:513,36,0	1/1:4,40:44:99:1741,117,0	1/1:1,11:12:36.01:487,36,0	1/1:0,6:6:12.04:180,12,0	1/1:0,35:35:99:1484,99,0	1/1:0,19:19:51.17:764,51,0	1/1:0,12:12:36.12:539,36,0	1/1:0,19:19:54.18:809,54,0	1/1:0,5:5:15.05:225,15,0
chr10	93181481	.	CTG	C	7192.52	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.936;DP=709;FS=1.440;HRun=0;HaplotypeScore=86.9380;InbreedingCoeff=1.0000;MQ=84.67;MQ0=0;MQRankSum=-5.835;QD=38.46;ReadPosRankSum=4.351;VQSLOD=6.9518;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,153,2817	0/0:15,0:15:45.15:0,45,842	0/0:27,0:27:72.23:0,72,1253	0/0:28,0:28:56.19:0,56,1105	0/0:17,0:17:51.17:0,51,944	0/0:21,0:21:60.21:0,60,1123	0/0:22,0:22:66.21:0,66,1188	0/0:21,0:21:60.21:0,60,1118	0/0:23,0:23:69.24:0,69,1276	0/0:21,0:21:63.21:0,63,1151	0/0:19,0:19:57.20:0,57,1060	1/1:0,28:28:78.26:1148,78,0	1/1:1,24:25:60.20:883,60,0	1/1:0,28:28:72.24:1058,72,0	0/0:29,0:29:84.23:0,84,1423	0/0:24,0:24:66.21:0,66,1205	0/0:36,0:36:99:0,105,1947	0/0:20,0:20:54.16:0,54,962	0/0:20,0:20:60.20:0,60,1091	0/0:20,0:20:54.19:0,54,1001	0/0:35,0:35:99:0,105,1932	1/1:2,29:31:78.26:1146,78,0	1/1:0,21:21:57.19:839,57,0	1/1:0,30:30:81.27:1192,81,0	1/1:1,23:24:63.17:927,63,0	0/0:34,0:34:99:0,99,1717	0/0:25,0:25:75.23:0,75,1330	0/0:13,0:13:39.13:0,39,730
chr10	93182473	.	T	TTGTGTG	2949.50	PASS	AB=0.767;AC=41;AF=0.732;AN=56;BaseQRankSum=-1.609;DP=685;FS=20.295;HRun=0;HaplotypeScore=211.2634;InbreedingCoeff=-0.0432;MQ=50.47;MQ0=11;MQRankSum=-2.711;QD=4.67;ReadPosRankSum=-6.602;VQSLOD=-0.7546;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:34:5.79:0,6,12	1/1:7,4:11:9.03:288,9,0	0/0:9,0:6:2.95:0,3,19	0/1:20,0:15:1.09:15,0,1	0/1:18,0:29:14.27:29,0,14	1/1:14,0:23:2.55:75,3,0	1/1:16,0:15:9:86,9,0	0/1:29,0:26:5.49:245,0,5	1/1:13,0:35:1.86:45,2,0	0/1:23,0:46:99:177,0,170	0/1:10,0:24:20.47:23,0,20	1/1:9,13:25:2.73:94,3,0	1/1:10,10:21:3.69:99,4,0	1/1:7,8:19:9.03:232,9,0	1/1:11,10:22:11.97:326,12,0	0/0:3,0:10:6.55:0,7,69	1/1:11,0:26:21.07:281,21,0	1/1:12,0:12:8.51:148,9,0	0/1:11,0:15:8.76:9,0,46	0/1:14,0:28:8.88:27,0,9	1/1:30,0:50:0.31:24,0,0	1/1:19,1:27:8.43:196,8,0	1/1:10,0:15:6:63,6,0	1/1:10,9:21:6.02:136,6,0	1/1:19,8:31:4.63:102,5,0	0/1:19,0:33:74.86:152,0,75	1/1:12,0:23:0.35:51,0,0	0/1:16,0:21:19.96:173,0,20
chr10	93182511	.	A	ATGTG	1747.07	PASS	AB=0.988;AC=22;AF=0.393;AN=56;BaseQRankSum=8.520;DP=810;FS=55.627;HRun=0;HaplotypeScore=375.6779;InbreedingCoeff=-0.5079;MQ=36.32;MQ0=30;MQRankSum=-7.131;QD=2.99;ReadPosRankSum=-1.617;VQSLOD=0.2339;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:25:17.80:0,18,214	1/1:17,2:19:2.72:82,3,0	0/0:28,0:6:18.05:0,18,301	0/0:34,0:10:24.07:0,24,410	0/1:51,0:48:70.53:71,0,615	0/1:26,0:24:11.87:12,0,73	0/1:16,0:15:18.30:18,0,281	0/1:31,0:25:99:180,0,554	0/1:35,1:34:58.51:59,0,612	0/0:68,1:66:37.28:0,37,2240	0/1:29,1:29:10.91:11,0,317	0/1:23,1:24:84.39:84,0,142	0/1:24,0:24:40.57:41,0,223	0/1:18,1:19:18.94:26,0,19	0/1:27,1:27:20.90:218,0,21	0/1:16,0:16:32.85:33,0,178	0/0:15,0:15:22.16:0,22,240	0/1:8,0:8:65.25:65,0,160	0/0:20,0:17:45.06:0,45,698	0/1:39,0:36:60.52:61,0,491	0/0:34,0:34:59.89:0,60,1052	0/1:38,0:37:7.18:161,0,7	0/1:23,0:21:65.05:65,0,66	0/1:15,0:15:20.24:20,0,57	0/1:46,0:46:58.61:195,0,59	0/1:41,1:37:99:114,0,1080	0/1:29,0:28:99:115,0,638	0/1:20,0:21:66.28:277,0,66
chr10	93182545	.	G	GTA	214.12	PASS	AB=0.994;AC=18;AF=0.321;AN=56;BaseQRankSum=6.556;DP=712;FS=42.786;HRun=0;HaplotypeScore=338.5840;InbreedingCoeff=0.0253;MQ=32.94;MQ0=8;MQRankSum=-5.560;QD=0.52;ReadPosRankSum=0.829;VQSLOD=1.1714;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:13:0:1,0,0	1/1:17,4:21:2.84:55,3,0	0/0:43,0:11:33.10:0,33,478	0/0:43,0:15:21.67:0,22,545	0/0:41,0:41:10.97:0,11,188	0/0:21,2:23:0.69:0,1,43	0/0:14,0:14:17.51:0,18,249	0/1:31,0:25:16.55:17,0,553	0/1:31,0:30:29.44:29,0,242	0/1:61,1:60:25.18:25,0,1182	0/1:27,0:27:1.42:1,0,80	0/1:20,0:20:11.31:11,0,40	0/0:21,0:21:13.50:0,14,138	0/1:18,0:18:0.76:2,0,1	1/1:17,5:22:5.01:150,5,0	0/1:16,0:16:3.67:4,0,41	0/0:9,1:10:21.04:0,21,306	0/0:7,0:7:10.44:0,10,111	0/0:18,0:13:36.11:0,36,527	0/0:30,0:30:3.75:0,4,106	0/0:23,0:22:35.95:0,36,491	1/1:35,1:36:5.18:19,5,0	0/0:17,0:16:4.34:0,4,90	0/0:12,0:11:2.96:0,3,20	0/1:42,1:43:17.09:17,0,37	0/1:31,1:29:3.63:4,0,605	0/1:26,0:26:16.28:16,0,273	0/1:9,0:9:3.99:4,0,62
chr10	93182547	.	GTA	G	480.16	PASS	AB=0.864;AC=17;AF=0.304;AN=56;BaseQRankSum=7.219;DP=691;FS=36.826;HRun=0;HaplotypeScore=322.1637;InbreedingCoeff=-0.0691;MQ=32.85;MQ0=7;MQRankSum=-5.370;QD=1.22;ReadPosRankSum=-0.054;VQSLOD=1.4566;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,4:12:0.27:1,0,0	1/1:19,2:21:4.35:33,4,0	0/0:41,0:11:33.11:0,33,623	0/0:42,0:14:38.79:0,39,626	0/0:33,8:41:10.80:0,11,257	0/0:15,8:23:3.57:0,4,59	0/0:13,1:14:17.26:0,17,284	0/0:28,0:24:37.35:0,37,806	0/1:23,8:30:25.05:25,0,284	0/1:48,13:59:99:255,0,1277	0/1:21,6:27:32.51:33,0,93	0/0:18,1:19:5.36:0,5,62	0/1:18,3:21:7.65:8,0,100	0/0:17,1:18:0.03:0,0,2	1/1:18,4:22:9.56:75,10,0	0/1:13,2:15:8.75:9,0,28	0/0:10,0:10:20.99:0,21,310	0/0:7,0:7:4.42:0,4,114	0/0:16,0:11:33.09:0,33,558	0/1:24,6:30:15.09:15,0,51	0/0:21,0:20:29.52:0,30,511	0/1:19,16:35:3.01:3,0,30	0/0:14,3:16:0.95:0,1,65	0/1:11,0:10:0.13:0,0,0	0/1:36,6:42:53.14:53,0,87	0/1:29,2:28:14.74:15,0,785	0/1:22,2:25:84.82:85,0,264	0/1:8,0:8:17.78:18,0,52
chr10	93182557	.	G	GTA	1091.91	PASS	AB=0.946;AC=24;AF=0.429;AN=56;BaseQRankSum=7.690;DP=610;FS=38.186;HRun=0;HaplotypeScore=302.9868;InbreedingCoeff=-0.1206;MQ=32.39;MQ0=3;MQRankSum=-6.477;QD=2.30;ReadPosRankSum=-4.023;VQSLOD=0.7076;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:11:0:1,0,0	1/1:18,2:20:3.01:51,3,0	0/0:33,0:10:30.06:0,30,416	0/0:25,0:8:17.98:0,18,244	0/1:39,1:39:65.65:66,0,141	0/0:19,2:21:1.08:0,1,43	0/0:12,0:12:11.47:0,11,145	0/1:16,0:13:35.91:36,0,373	0/1:26,3:28:79.36:79,0,94	0/1:49,2:49:52.87:53,0,952	0/1:27,1:28:30.12:30,0,41	0/1:14,4:18:4.86:46,0,5	0/1:18,2:20:14.92:37,0,15	0/1:17,1:18:0.76:2,0,1	1/1:13,5:18:8.44:140,8,0	1/1:14,0:14:2.61:43,3,0	0/0:8,1:9:5.99:0,6,86	0/1:7,0:7:6.58:7,0,77	0/0:10,0:9:26.79:0,27,334	0/1:28,1:29:14.38:70,0,14	0/0:17,0:17:18.72:0,19,257	1/1:32,1:33:8.98:122,9,0	0/1:17,0:16:15.02:39,0,15	0/1:8,1:8:0:0,0,0	0/1:40,1:41:22.34:159,0,22	0/1:26,4:28:99:187,0,507	0/1:22,2:24:78.09:78,0,188	0/0:8,0:8:7.13:0,7,60
chr10	93187105	.	TGCAGGGACCCTTA	T	1519.85	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.143;DP=708;FS=3.466;HRun=0;HaplotypeScore=289.7645;InbreedingCoeff=0.9958;MQ=86.07;MQ0=0;MQRankSum=-6.828;QD=50.66;ReadPosRankSum=-0.824;VQSLOD=2.9374;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:30:48.16:1615,48,0	0/0:17,0:17:48.16:0,48,3015	0/0:26,0:26:75.25:0,75,3528	0/0:21,0:21:60.17:0,60,3266	0/0:28,0:28:84.15:0,84,4228	0/0:14,0:14:42.14:0,42,2337	0/0:20,0:20:60.21:0,60,3436	0/0:27,0:27:75.26:0,75,3711	0/0:20,0:20:54.18:0,54,2774	0/0:24,0:24:72.25:0,72,3951	0/0:8,0:8:21.06:0,21,978	0/0:32,0:32:96.33:0,96,5076	0/0:23,0:23:69.24:0,69,3089	0/0:35,0:35:99:0,105,5895	0/0:23,0:23:69.22:0,69,3900	0/0:21,0:21:60.19:0,60,3130	0/0:50,0:50:99:0,148,9039	0/0:24,0:24:72.25:0,72,4190	0/0:17,0:17:45.13:0,45,2128	0/0:20,0:20:57.18:0,57,2867	0/0:58,0:58:99:0,166,9078	0/0:29,0:29:78.25:0,78,3953	0/0:13,0:13:39.13:0,39,1927	0/0:45,0:45:99:0,132,6984	0/0:23,0:23:66.19:0,66,3390	0/0:22,0:22:66.23:0,66,3370	0/0:25,0:25:72.23:0,72,3651	0/0:13,0:13:39.13:0,39,2255
chr10	93188225	.	GC	G	7829.02	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=9.649;DP=602;FS=5.275;HRun=6;HaplotypeScore=67.4644;InbreedingCoeff=0.9987;MQ=79.85;MQ0=1;MQRankSum=-0.070;QD=26.81;ReadPosRankSum=2.167;VQSLOD=5.4705;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,40:41:99:1161,108,0	1/1:0,8:8:18.05:193,18,0	0/0:17,0:18:40.55:0,41,518	0/0:20,0:24:37.88:0,38,627	0/0:13,0:13:39.11:0,39,497	0/0:28,0:28:72.22:0,72,928	0/0:24,0:24:69.19:0,69,876	1/1:1,22:23:63.16:676,63,0	0/0:19,0:19:45.15:0,45,589	0/0:14,0:14:39.12:0,39,500	0/0:16,0:16:48.16:0,48,632	1/1:4,19:23:48.12:515,48,0	1/1:1,15:16:36.09:384,36,0	1/1:0,23:23:57.14:612,57,0	1/1:2,12:14:30.07:322,30,0	0/0:19,0:19:57.14:0,57,729	1/1:0,24:24:69.17:742,69,0	1/1:3,15:18:42.10:451,42,0	0/0:21,0:21:60.16:0,60,755	0/0:23,0:23:69.21:0,69,886	0/0:43,0:43:99:0,123,1616	1/1:0,21:21:51.13:548,51,0	1/1:1,19:20:45.11:484,45,0	1/1:0,30:30:81.20:870,81,0	1/1:2,15:17:42.11:451,42,0	0/0:16,0:16:48.15:0,48,618	0/0:31,0:31:87.28:0,87,1142	1/1:0,13:13:39.10:419,39,0
chr10	93188403	.	TAC	T	816.63	PASS	AB=0.985;AC=26;AF=0.500;AN=52;BaseQRankSum=7.005;DP=525;FS=7.039;HRun=0;HaplotypeScore=174.6092;InbreedingCoeff=0.3091;MQ=45.32;MQ0=32;MQRankSum=-3.578;QD=2.89;ReadPosRankSum=6.253;VQSLOD=1.6404;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,14:38:62.92:735,63,0	0/0:5,0:5:9.03:0,9,145	0/0:33,0:22:17.83:0,18,310	0/0:46,0:21:22.57:0,23,427	1/1:12,0:11:4.07:13,4,0	0/0:17,0:15:32.79:0,33,400	0/0:21,0:21:27.08:0,27,375	0/0:35,0:32:24.62:0,25,789	1/1:17,0:17:11.01:36,11,0	0/0:15,0:12:1.40:0,1,35	1/1:17,0:15:4.34:14,4,0	1/1:19,0:16:1.83:6,2,0	1/1:14,0:13:6.48:20,6,0	1/1:13,0:13:3.28:10,3,0	0/1:14,1:13:11.53:12,0,294	0/1:15,0:14:0:0,0,0	0/0:21,0:21:41.80:0,42,522	0/1:16,1:17:19.16:19,0,608	./.	./.	0/0:21,0:14:5.79:0,6,38	0/1:11,0:9:5.39:5,0,18	0/1:15,0:14:1.92:2,0,40	1/1:20,0:17:1.23:3,1,0	0/1:17,0:16:14.41:15,0,14	0/1:13,0:9:14.72:15,0,25	0/1:20,0:19:4.88:29,0,5	1/1:9,0:9:10.78:44,11,0
chr10	93188406	.	ACACACACAC	A	2472.87	PASS	AB=1.000;AC=33;AF=0.611;AN=54;BaseQRankSum=4.317;DP=515;FS=1.142;HRun=0;HaplotypeScore=209.7017;InbreedingCoeff=0.5352;MQ=42.88;MQ0=35;MQRankSum=-5.554;QD=7.95;ReadPosRankSum=5.398;VQSLOD=2.3823;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:37:76.97:77,0,97	0/0:6,0:6:12.04:0,12,408	0/0:29,0:18:19.88:0,20,427	0/0:45,0:20:35.21:0,35,530	1/1:11,0:10:1.36:70,1,0	0/1:20,0:18:99:121,0,334	0/0:21,0:21:23.10:0,23,288	0/0:34,0:31:67.97:0,68,959	1/1:18,0:18:18.53:252,19,0	1/1:15,0:12:29.63:232,30,0	0/1:15,0:13:0.33:62,0,0	1/1:17,0:14:9.03:117,9,0	1/1:13,0:12:9.03:130,9,0	1/1:11,0:11:5.91:57,6,0	0/0:16,0:13:24.08:0,24,830	1/1:14,0:13:2.46:13,2,0	0/0:22,0:22:43.08:0,43,933	0/0:18,0:18:51.75:0,52,1391	1/1:14,0:10:17.56:105,18,0	./.	0/1:21,0:13:4.53:78,0,5	1/1:11,0:9:12.04:157,12,0	1/1:15,0:14:5.50:45,6,0	1/1:20,0:17:8.75:68,9,0	1/1:17,0:16:15.04:195,15,0	0/1:13,0:9:90.89:181,0,91	1/1:19,0:18:26.98:374,27,0	1/1:5,4:9:12.04:328,12,0
chr10	93188408	.	ACACACAC	A	3085.43	PASS	AB=0.956;AC=35;AF=0.648;AN=54;BaseQRankSum=3.176;DP=498;FS=2.534;HRun=0;HaplotypeScore=192.4714;InbreedingCoeff=0.6138;MQ=41.23;MQ0=35;MQRankSum=-5.438;QD=10.32;ReadPosRankSum=5.084;VQSLOD=2.6409;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:36:43.92:44,0,56	0/0:6,0:6:12.04:0,12,342	0/0:25,0:14:20.09:0,20,425	0/0:45,0:18:30.90:0,31,548	1/1:8,3:10:7.47:95,7,0	0/1:20,0:18:79.01:79,0,302	0/0:23,0:23:22.94:0,23,286	0/0:32,0:28:62.27:0,62,905	1/1:12,5:17:19.31:298,19,0	1/1:13,1:11:30.10:395,30,0	1/1:11,3:12:7.27:91,7,0	1/1:14,2:13:9.03:126,9,0	1/1:9,3:11:9.03:157,9,0	1/1:10,1:11:6.02:112,6,0	0/0:15,0:12:24.08:0,24,658	1/1:14,0:13:2.66:38,3,0	0/0:22,0:22:37.18:0,37,752	0/0:18,0:18:50.55:0,51,1108	1/1:12,0:8:18.06:229,18,0	./.	1/1:20,0:13:4.01:47,4,0	1/1:9,2:9:12.04:173,12,0	1/1:12,2:13:5.97:63,6,0	1/1:18,0:15:9.03:138,9,0	1/1:12,4:15:15.05:229,15,0	0/1:11,2:9:67.25:327,0,67	1/1:15,4:18:27.05:435,27,0	1/1:9,0:9:12.04:207,12,0
chr10	93188414	.	AC	A	2281.71	PASS	AB=0.781;AC=35;AF=0.648;AN=54;BaseQRankSum=3.194;DP=470;FS=0.000;HRun=2;HaplotypeScore=161.8571;InbreedingCoeff=0.7611;MQ=36.11;MQ0=39;MQRankSum=-5.458;QD=9.16;ReadPosRankSum=3.754;VQSLOD=1.4426;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,3:35:12.96:0,13,34	0/0:4,0:4:12.04:0,12,174	0/0:20,0:8:20.09:0,20,251	0/0:45,1:14:35.97:0,36,436	1/1:4,7:10:8.97:81,9,0	0/0:14,3:15:28.91:0,29,292	0/0:21,2:22:23.97:0,24,267	0/0:30,0:26:62.51:0,63,804	1/1:6,10:16:19.29:195,19,0	1/1:5,9:11:30.09:370,30,0	1/1:6,9:12:8.97:83,9,0	1/1:6,9:12:9.03:106,9,0	1/1:3,8:10:9.02:91,9,0	1/1:1,9:10:6.02:68,6,0	0/0:13,0:11:25.13:0,25,256	1/1:1,12:12:3:38,3,0	0/1:18,7:25:77.43:77,0,325	0/0:18,0:18:41.09:0,41,562	1/1:5,7:7:18.06:229,18,0	./.	1/1:10,9:10:6.89:65,7,0	1/1:5,4:7:12.03:137,12,0	1/1:2,10:11:6.01:64,6,0	1/1:1,13:12:9.03:113,9,0	1/1:5,8:12:15.03:161,15,0	1/1:7,7:9:3.91:235,4,0	1/1:4,14:17:26.93:265,27,0	1/1:7,0:7:12:105,12,0
chr10	93188420	.	CACACACAT	C	2067.51	PASS	AB=1.000;AC=26;AF=0.500;AN=52;BaseQRankSum=0.633;DP=562;FS=1.965;HRun=0;HaplotypeScore=250.9465;InbreedingCoeff=-0.1159;MQ=32.78;MQ0=42;MQRankSum=-0.875;QD=5.41;ReadPosRankSum=4.174;VQSLOD=2.2177;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,5:35:43.98:512,44,0	0/1:4,0:4:11.93:12,0,278	0/0:26,0:7:11.91:0,12,89	0/0:51,0:9:11.79:0,12,138	0/1:16,0:15:9.88:51,0,10	1/1:16,0:14:12.02:214,12,0	0/1:24,0:23:2.23:38,0,2	0/1:27,0:23:21.12:273,0,21	1/1:20,0:20:15.37:178,15,0	0/1:21,0:18:23.48:23,0,178	0/1:17,0:14:10.75:46,0,11	0/1:20,0:17:27.43:27,0,34	0/1:18,0:17:19.12:94,0,19	0/1:17,0:17:25.48:26,0,25	0/0:17,0:14:32.53:0,33,574	./.	0/1:25,0:25:44.79:45,0,566	0/1:19,0:19:49.71:50,0,767	0/0:18,0:12:17.88:0,18,216	./.	0/0:21,0:13:2.22:0,2,7	0/1:15,0:12:4.74:57,0,5	1/1:18,0:17:3.47:30,3,0	0/0:15,0:12:0.47:0,0,1	1/1:18,0:18:12:124,12,0	0/1:21,0:16:64.02:64,0,333	0/1:24,0:23:99:164,0,130	1/1:6,0:6:12.04:200,12,0
chr10	93188426	.	CAT	C	1602.98	PASS	AB=0.982;AC=25;AF=0.446;AN=56;BaseQRankSum=-6.018;DP=447;FS=1.195;HRun=0;HaplotypeScore=187.6553;InbreedingCoeff=0.1999;MQ=32.81;MQ0=36;MQRankSum=4.641;QD=5.53;ReadPosRankSum=-3.355;VQSLOD=2.3761;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,3:33:50.34:379,50,0	0/1:4,0:4:12.09:12,0,46	0/1:30,0:6:2.88:3,0,57	0/0:53,0:5:11.47:0,11,77	0/0:12,0:12:7.35:0,7,27	1/1:15,0:13:11.91:88,12,0	1/1:27,0:26:0.55:52,1,0	1/1:21,1:19:53.54:389,54,0	0/1:13,0:13:8.88:15,0,9	0/0:14,0:11:7.91:0,8,57	0/0:11,0:9:7.66:0,8,29	0/1:15,0:13:7.52:17,0,8	0/1:13,0:13:6.57:7,0,13	0/0:8,0:8:4.49:0,4,16	0/1:15,2:14:9.11:233,0,9	0/0:8,0:7:2.21:0,2,7	1/1:24,0:24:1.38:132,1,0	0/1:18,2:20:42.44:353,0,42	0/0:12,0:8:12.55:0,13,70	1/1:8,0:8:3:25,3,0	0/1:12,0:8:0:0,0,0	0/1:12,0:11:3.35:3,0,5	0/0:11,0:10:2.99:0,3,9	0/1:4,0:2:0:0,0,0	0/0:13,0:12:7.48:0,7,20	0/0:14,0:11:10.22:0,10,64	0/1:13,0:13:6.44:6,0,30	1/1:7,0:7:10.98:48,11,0
chr10	93188428	.	TAC	T	790.58	PASS	AB=0.975;AC=40;AF=0.714;AN=56;BaseQRankSum=6.433;DP=454;FS=2.755;HRun=0;HaplotypeScore=192.0353;InbreedingCoeff=0.3321;MQ=34.85;MQ0=37;MQRankSum=-4.790;QD=2.34;ReadPosRankSum=0.721;VQSLOD=2.5564;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:33:4.90:5,0,21	0/0:4,0:4:9.03:0,9,131	0/0:33,0:7:2.21:0,2,7	0/0:55,0:4:6.02:0,6,77	1/1:12,0:12:4.87:14,5,0	1/1:15,0:13:8.51:42,9,0	0/1:29,0:28:0.32:0,0,18	0/1:23,0:20:16.87:25,0,17	1/1:13,0:13:10.75:57,11,0	1/1:13,1:11:26.90:145,27,0	1/1:11,0:9:4.36:12,4,0	1/1:15,0:13:3.81:12,4,0	1/1:13,0:13:6.45:23,6,0	1/1:8,0:8:4.26:14,4,0	0/1:17,0:14:40.47:40,0,110	1/1:8,0:7:2.60:10,3,0	0/0:24,0:24:27.30:0,27,224	0/1:21,0:21:50.27:50,0,217	1/1:11,1:8:13.93:86,14,0	0/1:8,0:8:0:0,0,0	0/1:9,3:8:0:0,0,0	1/1:11,1:11:7.08:47,7,0	1/1:10,1:10:3.63:10,4,0	0/1:4,0:2:0:0,0,0	1/1:13,0:12:9.15:31,9,0	1/1:12,1:11:25.86:113,26,0	1/1:13,0:13:26.41:110,26,0	1/1:7,0:7:11.97:96,12,0
chr10	93188431	.	ACACACACACACACACACACACACG	A	7025.37	PASS	AB=0.891;AC=25;AF=0.446;AN=56;BaseQRankSum=5.219;DP=483;FS=29.066;HRun=0;HaplotypeScore=282.9881;InbreedingCoeff=0.1132;MQ=34.34;MQ0=42;MQRankSum=-7.078;QD=29.03;ReadPosRankSum=1.724;VQSLOD=2.5141;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:53.42:0,53,2176	0/0:3,0:3:9.03:0,9,878	0/0:41,0:7:15.52:0,16,450	0/0:56,0:4:11.71:0,12,348	1/1:11,3:14:8.86:467,9,0	0/1:13,0:12:10.42:298,0,10	0/1:30,0:29:82.41:94,0,82	0/0:24,0:21:60.21:0,60,2074	0/1:9,5:14:4.41:937,0,4	0/1:13,1:11:99:158,0,164	1/1:10,3:11:2.27:462,2,0	0/1:14,2:14:9.47:261,0,9	0/1:11,3:14:7.14:577,0,7	0/1:9,1:10:22.47:177,0,22	0/0:17,0:14:36.12:0,36,2707	1/1:8,0:7:0.77:51,1,0	0/0:24,0:24:48.64:0,49,2965	0/0:21,0:21:63.22:0,63,4444	0/0:14,0:9:18.02:0,18,234	0/1:11,0:11:22.64:23,0,50	1/1:13,0:9:2.94:18,3,0	0/1:11,2:12:61.06:357,0,61	1/1:10,2:11:9.78:332,10,0	0/0:6,0:4:0.47:0,0,1	1/1:9,4:12:20.49:744,20,0	0/1:11,2:11:99:457,0,337	0/1:10,4:14:34.63:772,0,35	1/1:3,4:7:20.87:841,21,0
chr10	93188434	.	CA	C	190.97	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=4.482;DP=495;FS=3.912;HRun=1;HaplotypeScore=203.9568;InbreedingCoeff=0.5582;MQ=35.27;MQ0=45;MQRankSum=-5.252;QD=2.98;ReadPosRankSum=-0.876;VQSLOD=-0.4383;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:55.37:0,55,680	0/0:3,0:3:9.03:0,9,144	0/0:46,0:6:12.04:0,12,158	0/0:57,0:3:6.02:0,6,96	0/0:17,0:17:11.86:0,12,94	1/1:4,6:9:15.03:88,15,0	1/1:9,9:18:27.04:203,27,0	0/0:23,0:21:56.53:0,57,638	0/1:14,0:14:18.82:19,0,54	0/0:15,1:13:34.61:0,35,295	0/0:13,0:11:11.94:0,12,112	0/0:16,0:14:11.86:0,12,118	0/0:14,0:14:17.15:0,17,139	0/0:12,0:12:11.88:0,12,108	0/0:17,0:15:38.90:0,39,443	0/0:9,0:8:3.47:0,3,29	0/0:25,0:25:43.67:0,44,570	0/0:19,0:19:56.87:0,57,655	0/0:15,0:10:25.60:0,26,260	0/0:12,0:12:3:0,3,37	0/1:15,0:11:0:0,0,0	0/0:15,0:14:10.26:0,10,63	0/0:14,0:13:5.96:0,6,53	0/0:7,0:5:2.79:0,3,37	0/0:13,0:12:11.39:0,11,64	0/0:14,0:12:24.52:0,25,256	0/0:15,0:15:13.18:0,13,204	1/1:7,0:7:6.48:16,6,0
chr10	93188453	.	ACG	A	1374.36	PASS	AB=0.972;AC=36;AF=0.643;AN=56;BaseQRankSum=10.490;DP=551;FS=18.328;HRun=0;HaplotypeScore=232.8255;InbreedingCoeff=0.6217;MQ=41.77;MQ0=29;MQRankSum=-7.667;QD=4.27;ReadPosRankSum=1.645;VQSLOD=1.5368;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:43.82:0,44,372	0/0:4,0:4:11.98:0,12,165	0/0:53,0:6:11.35:0,11,63	0/0:50,0:7:7.34:0,7,90	1/1:18,1:19:1.20:7,1,0	1/1:12,0:12:7.13:178,7,0	1/1:21,1:21:1.74:137,2,0	0/0:25,0:24:59.81:0,60,474	1/1:18,1:19:31.16:163,31,0	0/1:16,1:16:10.76:31,0,11	1/1:15,0:15:2.09:24,2,0	1/1:17,1:18:7.14:74,7,0	1/1:16,0:16:19.60:98,20,0	1/1:17,0:17:5.07:40,5,0	0/0:14,0:14:31.23:0,31,341	1/1:9,0:9:12.54:62,13,0	0/0:26,0:26:62.53:0,63,531	0/0:21,0:21:50.72:0,51,527	0/1:21,0:16:27.64:28,0,41	1/1:16,0:16:10.26:54,10,0	1/1:16,1:16:6.24:37,6,0	1/1:20,1:20:12.74:60,13,0	1/1:18,0:17:7.54:32,8,0	0/0:9,0:9:0.18:0,0,1	1/1:15,1:15:16.34:73,16,0	1/1:15,1:14:15.44:74,15,0	1/1:22,0:22:8.77:156,9,0	1/1:6,5:11:22.85:236,23,0
chr10	93188456	.	G	GA	1783.83	PASS	AB=0.832;AC=30;AF=0.536;AN=56;BaseQRankSum=5.060;DP=565;FS=0.420;HRun=0;HaplotypeScore=229.1464;InbreedingCoeff=0.2648;MQ=45.84;MQ0=25;MQRankSum=-1.709;QD=5.26;ReadPosRankSum=-2.393;VQSLOD=2.9505;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:50.97:0,51,605	0/0:5,0:5:15.04:0,15,187	0/0:58,0:11:19.23:0,19,246	0/0:50,0:7:17.96:0,18,186	0/1:14,5:19:18.02:37,0,18	1/1:3,9:12:7.18:81,7,0	1/1:7,15:21:34.70:247,35,0	0/0:29,0:28:69.15:0,69,908	1/1:17,1:18:10.87:175,11,0	0/1:15,1:16:34.63:100,0,35	0/1:12,5:17:32.62:64,0,33	1/1:18,2:20:3.55:110,4,0	0/1:14,3:17:7.01:87,0,7	1/1:10,7:17:12.04:141,12,0	0/0:14,0:14:36.12:0,36,503	1/1:9,1:10:11.93:70,12,0	0/0:23,0:23:56.02:0,56,719	0/0:20,0:20:60.18:0,60,811	0/1:18,3:16:27.95:28,0,124	0/1:11,5:16:1.63:55,0,2	1/1:8,8:15:6.96:41,7,0	0/1:17,6:22:11.89:128,0,12	0/1:13,6:18:19.89:54,0,20	1/1:4,5:9:5.92:52,6,0	0/1:13,2:15:7.79:41,0,8	0/1:14,2:16:11.14:96,0,11	1/1:18,7:25:14.89:183,15,0	1/1:9,2:11:31.03:181,31,0
chr10	93188457	.	G	GT	3864.26	PASS	AB=0.797;AC=37;AF=0.661;AN=56;BaseQRankSum=8.090;DP=573;FS=0.000;HRun=0;HaplotypeScore=226.2437;InbreedingCoeff=0.6962;MQ=46.17;MQ0=25;MQRankSum=-5.012;QD=11.20;ReadPosRankSum=1.122;VQSLOD=3.8176;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:48.01:0,48,586	0/0:5,0:5:15.04:0,15,185	0/0:61,0:13:14.16:0,14,234	0/0:50,0:7:17.44:0,17,162	1/1:14,5:19:3.38:47,3,0	0/1:3,9:12:11.51:161,0,12	1/1:6,15:21:19.13:398,19,0	0/0:28,0:27:72.19:0,72,914	1/1:17,1:18:39.40:352,39,0	0/1:16,1:17:19.27:154,0,19	1/1:12,5:17:10.72:138,11,0	1/1:18,2:20:31.35:300,31,0	1/1:13,3:17:25.20:203,25,0	1/1:10,7:17:24.70:229,25,0	0/0:13,0:13:36.12:0,36,496	1/1:9,1:10:19.72:166,20,0	0/0:23,0:23:54.13:0,54,714	0/0:20,0:20:59.77:0,60,724	0/1:18,3:16:50.72:51,0,116	1/1:0,5:16:17.04:119,17,0	1/1:8,8:15:8.29:97,8,0	1/1:18,6:23:9.36:193,9,0	1/1:13,6:18:13.20:136,13,0	1/1:5,5:10:8.93:90,9,0	1/1:13,2:15:14.89:135,15,0	1/1:14,2:16:21.68:196,22,0	1/1:21,7:28:30.68:412,31,0	1/1:9,2:11:32.79:287,33,0
chr10	93188974	.	CAGGTCAAA	C	2463.31	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.176;DP=710;FS=0.000;HRun=0;HaplotypeScore=224.9814;InbreedingCoeff=0.9996;MQ=86.84;MQ0=0;MQRankSum=-8.853;QD=68.43;ReadPosRankSum=0.236;VQSLOD=3.1342;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,5419	0/0:13,0:13:39.13:0,39,1747	0/0:32,0:32:96.33:0,96,3866	0/0:23,0:23:65.52:0,66,2360	0/0:18,0:18:51.18:0,51,2334	1/1:0,15:15:42.14:1265,42,0	1/1:0,21:21:45.15:1320,45,0	0/0:35,0:35:99:0,105,4508	0/0:19,0:19:57.20:0,57,2640	0/0:40,0:40:99:0,120,5176	0/0:20,0:20:60.20:0,60,2623	0/0:28,0:28:84.25:0,84,3506	0/0:13,0:13:39.13:0,39,1595	0/0:26,0:26:78.20:0,78,3277	0/0:26,0:26:78.27:0,78,3415	0/0:22,0:22:66.23:0,66,2816	0/0:35,0:35:99:0,105,4831	0/0:22,0:22:66.21:0,66,2803	0/0:17,0:17:51.17:0,51,2059	0/0:24,0:24:72.23:0,72,3110	0/0:37,0:37:99:0,111,5048	0/0:23,0:23:69.24:0,69,2955	0/0:21,0:21:63.22:0,63,2893	0/0:35,0:35:99:0,105,4298	0/0:27,0:27:81.26:0,81,3547	0/0:29,0:29:87.27:0,87,3666	0/0:39,0:39:99:0,117,5209	0/0:10,0:10:30.10:0,30,1364
chr10	93189420	.	ATT	A	16122.63	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.036;DP=603;FS=0.883;HRun=10;HaplotypeScore=88.5599;InbreedingCoeff=0.9881;MQ=82.08;MQ0=2;MQRankSum=-6.302;QD=28.49;ReadPosRankSum=5.593;VQSLOD=5.0602;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,37:37:99:1137,102,0	1/1:0,8:8:24.06:268,24,0	0/0:19,0:21:23.35:0,23,296	0/0:15,0:16:26.66:0,27,337	1/1:2,25:27:69.15:769,69,0	1/1:2,26:28:60.16:669,60,0	1/1:1,19:20:54.14:602,54,0	1/1:3,31:34:93.23:1033,93,0	1/1:1,17:18:45.12:502,45,0	1/1:2,27:29:81.19:885,81,0	1/1:2,15:18:48.02:506,48,0	1/1:0,15:15:36.10:401,36,0	1/1:0,12:12:33.09:368,33,0	1/1:2,10:12:27.07:301,27,0	1/1:0,27:27:78.21:870,78,0	1/1:4,12:16:32.82:368,33,0	1/1:1,32:33:75.20:835,75,0	1/1:4,16:20:42.11:468,42,0	1/1:4,19:23:57.15:635,57,0	1/1:3,27:30:75.15:819,75,0	1/1:1,17:18:48.12:535,48,0	1/1:0,19:19:57.15:636,57,0	1/1:0,23:23:59.87:668,60,0	1/1:0,20:20:51.13:569,51,0	1/1:0,23:23:69.19:768,69,0	1/1:3,17:20:51.13:569,51,0	1/1:1,28:28:72.11:775,72,0	1/1:1,5:6:15.04:167,15,0
chr10	93190176	.	ACAGTCTCTTCC	A	4530.12	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.652;DP=571;FS=0.547;HRun=0;HaplotypeScore=178.1934;InbreedingCoeff=0.9824;MQ=95.66;MQ0=0;MQRankSum=-10.054;QD=59.61;ReadPosRankSum=1.677;VQSLOD=4.3140;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,28:32:45.15:1388,45,0	1/1:1,4:5:9.03:317,9,0	0/0:24,0:24:57.62:0,58,2620	0/0:31,0:32:57.67:0,58,2941	0/0:17,0:17:48.16:0,48,2147	0/0:15,0:15:39.06:0,39,2235	0/0:29,0:29:87.28:0,87,4059	0/0:30,0:30:90.31:0,90,4632	0/0:21,0:21:63.20:0,63,2928	0/0:26,0:26:72.23:0,72,3529	0/0:13,0:13:39.13:0,39,2083	0/0:24,0:24:72.25:0,72,3920	0/0:20,0:20:57.20:0,57,3043	0/0:21,0:21:63.20:0,63,3203	1/1:0,18:18:48.16:1612,48,0	0/0:18,0:18:54.19:0,54,2959	1/1:1,10:11:18.06:604,18,0	1/1:0,10:10:18.06:608,18,0	0/0:24,0:24:63.21:0,63,2894	0/0:18,0:18:54.19:0,54,3042	0/0:33,0:33:96.33:0,96,5425	0/0:16,0:16:42.14:0,42,2159	0/0:22,0:22:60.17:0,60,2787	0/0:24,0:23:72.20:0,72,3729	0/0:21,0:21:60.21:0,60,3248	0/0:17,0:18:54.19:0,54,2892	0/0:19,0:19:57.18:0,57,3105	0/0:10,0:10:30.10:0,30,1688
chr10	93192311	.	A	AGTGT	5758.24	PASS	AB=0.811;AC=47;AF=0.904;AN=52;BaseQRankSum=0.000;DP=550;FS=5.662;HRun=0;HaplotypeScore=132.2807;InbreedingCoeff=0.2582;MQ=64.05;MQ0=15;MQRankSum=0.278;QD=12.36;ReadPosRankSum=-0.174;VQSLOD=3.8358;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:22:1.63:6,2,0	1/1:7,0:9:9.03:156,9,0	./.	0/0:37,0:16:3.01:0,3,47	1/1:8,9:18:9.03:214,9,0	1/1:20,0:19:6:71,6,0	1/1:14,0:15:9.03:140,9,0	1/1:29,0:28:36.11:624,36,0	1/1:6,8:17:29.31:592,29,0	1/1:12,6:21:27.03:462,27,0	1/1:10,6:18:6.02:140,6,0	1/1:13,0:14:6.02:87,6,0	1/1:12,0:17:5.92:104,6,0	1/1:15,0:20:12.04:189,12,0	1/1:15,0:20:18.06:313,18,0	0/1:5,10:19:39.80:560,0,40	1/1:17,0:19:6.49:102,6,0	1/1:13,0:16:9.03:140,9,0	1/1:20,6:28:21.07:415,21,0	0/1:17,2:21:0.21:0,0,0	1/1:5,5:11:5.75:84,6,0	./.	0/1:14,0:13:0:0,0,0	1/1:11,0:13:2.59:52,3,0	1/1:10,0:14:6.02:103,6,0	1/1:17,10:29:45.71:745,46,0	1/1:10,10:24:26.23:413,26,0	1/1:13,0:12:3.01:47,3,0
chr10	93192325	.	T	TGTGTGT	3916.27	PASS	AB=1.000;AC=44;AF=0.880;AN=50;BaseQRankSum=-1.966;DP=585;FS=2.605;HRun=0;HaplotypeScore=142.0731;InbreedingCoeff=0.1949;MQ=52.37;MQ0=22;MQRankSum=0.162;QD=8.82;ReadPosRankSum=-1.473;VQSLOD=2.6083;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:0.47:0,0,1	1/1:9,0:9:6.02:157,6,0	./.	0/0:39,0:16:3:0,3,61	1/1:15,0:15:9.03:115,9,0	1/1:25,0:23:6:71,6,0	1/1:23,0:22:5.37:70,5,0	1/1:29,0:28:10.08:76,10,0	1/1:18,0:18:21.84:271,22,0	1/1:23,0:23:24.06:343,24,0	1/1:17,0:17:6.02:74,6,0	1/1:14,0:13:3.01:78,3,0	1/1:19,0:19:5.96:157,6,0	1/1:19,0:19:12.04:311,12,0	1/1:24,0:23:9.03:235,9,0	0/1:21,0:21:74.81:276,0,75	1/1:18,0:18:2.91:78,3,0	1/1:14,0:13:15.04:297,15,0	1/1:27,0:27:21.07:316,21,0	0/1:17,0:17:0:0,0,0	1/1:12,0:12:2.14:37,2,0	./.	./.	1/1:17,0:17:3:79,3,0	1/1:13,0:13:3.01:78,3,0	1/1:30,0:30:33.51:526,34,0	1/1:26,0:24:12.42:187,12,0	1/1:9,4:13:3.01:85,3,0
chr10	93192396	.	CT	C	1224.62	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.315;DP=544;FS=4.669;HRun=7;HaplotypeScore=61.1517;InbreedingCoeff=0.9962;MQ=81.58;MQ0=0;MQRankSum=-1.416;QD=24.01;ReadPosRankSum=1.256;VQSLOD=4.1289;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,1227	0/0:9,0:9:27.09:0,27,340	0/0:26,0:26:67.35:0,67,760	0/0:18,0:18:47.31:0,47,528	0/0:21,0:21:60.17:0,60,729	1/1:1,27:28:69.15:704,69,0	1/1:1,22:23:63.14:643,63,0	0/0:32,0:32:81.22:0,81,991	0/0:17,0:17:51.16:0,51,630	0/0:16,0:16:42.13:0,42,517	0/0:13,0:13:39.12:0,39,490	0/0:10,0:10:27.07:0,27,327	0/0:27,0:27:75.05:0,75,916	0/0:24,0:24:69.14:0,69,832	0/0:19,0:19:51.16:0,51,630	0/0:16,0:16:41.87:0,42,487	0/0:23,0:23:66.21:0,66,830	0/0:10,0:10:30:0,30,327	0/0:22,0:22:66.19:0,66,815	0/0:18,0:18:45.14:0,45,561	0/0:17,0:17:45.14:0,45,566	0/0:17,0:17:51.16:0,51,642	0/0:11,0:11:33.09:0,33,397	0/0:35,0:35:99:0,99,1231	0/0:16,0:16:42.09:0,42,510	0/0:13,0:13:33.11:0,33,414	0/0:17,0:16:39.11:0,39,477	0/0:9,0:9:21.07:0,21,261
chr10	93193182	.	CAT	C	2279.13	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.801;DP=887;FS=7.929;HRun=0;HaplotypeScore=204.1176;InbreedingCoeff=0.9859;MQ=54.47;MQ0=7;MQRankSum=-7.166;QD=12.73;ReadPosRankSum=3.805;VQSLOD=2.1328;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,123,1563	0/0:13,0:13:32.19:0,32,354	0/0:53,0:36:97.37:0,97,1442	0/0:55,1:31:78.87:0,79,1095	0/0:25,0:25:71.64:0,72,947	0/0:23,0:23:7.70:0,8,114	0/0:34,0:34:64.55:0,65,521	0/0:19,0:19:44.98:0,45,429	0/0:37,0:37:60.29:0,60,848	0/0:33,0:33:80.43:0,80,1218	0/0:20,0:20:48.09:0,48,623	1/1:27,11:38:61.57:509,62,0	1/1:11,9:20:39.48:354,39,0	1/1:12,10:22:49.94:367,50,0	0/0:57,0:56:99:0,144,1835	0/0:39,0:39:78.86:0,79,1111	0/0:37,0:37:96.08:0,96,1186	0/0:25,0:25:56.97:0,57,651	0/0:20,0:19:36.53:0,37,757	0/0:26,0:26:54.43:0,54,698	0/0:58,0:58:99:0,121,1668	1/1:23,9:32:60.40:449,60,0	1/1:5,9:14:36.78:231,37,0	1/1:29,9:38:38.68:304,39,0	1/1:9,6:15:33.13:264,33,0	0/0:43,0:41:99:0,111,1577	0/0:23,0:22:62.97:0,63,672	0/0:12,0:12:27.18:0,27,233
chr10	93193190	.	CACACACAT	C	5755.50	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=5.437;DP=904;FS=24.303;HRun=0;HaplotypeScore=270.8604;InbreedingCoeff=0.9964;MQ=52.85;MQ0=11;MQRankSum=-8.165;QD=21.56;ReadPosRankSum=-1.324;VQSLOD=2.8972;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,111,2139	0/0:13,0:13:27.09:0,27,546	0/0:47,0:26:44.91:0,45,878	0/0:59,0:24:45.87:0,46,762	0/0:26,0:26:66.21:0,66,1221	1/1:21,2:23:15.93:189,16,0	1/1:30,2:32:54.60:727,55,0	1/1:15,0:15:17.92:141,18,0	0/0:40,0:40:45.23:0,45,1068	0/0:35,0:35:76.35:0,76,1339	0/0:19,0:19:38.06:0,38,683	1/1:43,0:42:47.09:997,47,0	1/1:21,0:21:47.71:844,48,0	1/1:21,0:21:31.28:536,31,0	0/0:57,0:56:99:0,123,2417	0/0:34,0:34:75.10:0,75,1371	0/0:39,0:39:69.14:0,69,1296	0/0:24,0:24:42.07:0,42,778	0/0:22,0:20:49.65:0,50,672	0/0:27,0:26:51.10:0,51,845	0/0:74,0:73:99:0,106,2027	1/1:28,1:29:53.70:754,54,0	1/1:15,1:16:28.39:314,28,0	1/1:40,0:40:39.80:418,40,0	1/1:16,0:16:37.49:560,37,0	0/0:42,0:40:50.08:0,50,1469	0/0:22,0:21:48.10:0,48,935	1/1:11,0:11:25.15:275,25,0
chr10	93193192	.	CACACAT	C	3824.19	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=9.104;DP=917;FS=21.386;HRun=0;HaplotypeScore=254.7098;InbreedingCoeff=0.8227;MQ=52.65;MQ0=14;MQRankSum=-6.859;QD=14.06;ReadPosRankSum=-3.037;VQSLOD=1.4215;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,110,1361	0/0:13,0:13:26.63:0,27,310	0/0:50,0:25:42.76:0,43,747	0/0:59,0:23:30.98:0,31,610	0/0:26,0:26:65.68:0,66,814	0/1:24,0:24:25.67:55,0,26	1/1:33,0:33:39.67:373,40,0	1/1:16,0:16:2.34:125,2,0	0/0:40,0:40:45.20:0,45,740	0/0:35,0:35:59.36:0,59,893	0/0:20,0:20:37.91:0,38,461	1/1:33,11:43:35.29:648,35,0	1/1:14,7:21:24.41:620,24,0	1/1:11,9:20:44.22:365,44,0	0/0:57,0:56:99:0,123,1561	0/0:35,0:35:66.02:0,66,887	0/0:38,0:38:69.13:0,69,886	0/0:24,0:24:41.52:0,42,513	0/0:23,0:21:42.50:0,42,526	0/0:27,0:26:50.87:0,51,563	0/0:77,0:76:99:0,105,1346	1/1:24,6:30:55.54:519,56,0	1/1:8,8:16:28.37:183,28,0	1/1:34,6:40:41.61:365,42,0	1/1:9,7:16:23.86:354,24,0	0/0:41,0:39:49.12:0,49,974	0/0:21,0:20:47:0,47,587	0/1:12,0:12:8.94:216,0,9
chr10	93193194	.	CACAT	C	3894.24	PASS	AB=0.974;AC=21;AF=0.375;AN=56;BaseQRankSum=10.229;DP=925;FS=9.248;HRun=0;HaplotypeScore=232.6751;InbreedingCoeff=0.7860;MQ=52.44;MQ0=16;MQRankSum=-5.670;QD=12.98;ReadPosRankSum=-4.836;VQSLOD=0.7484;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,110,851	0/0:13,0:13:26.63:0,27,187	0/0:52,0:21:42.87:0,43,662	0/0:59,0:21:26.96:0,27,461	0/0:25,0:25:65.39:0,65,535	1/1:23,0:23:16:94,16,0	1/1:32,0:33:47.64:349,48,0	0/1:16,0:16:10.97:159,0,11	0/0:41,0:41:43.19:0,43,423	0/0:36,0:36:18.73:0,19,529	0/0:20,0:20:38.19:0,38,288	1/1:45,1:45:81.83:694,82,0	1/1:18,3:21:21.30:502,21,0	1/1:21,0:21:44.78:367,45,0	0/0:56,0:55:99:0,122,912	0/0:35,0:35:19.95:0,20,475	0/0:37,0:37:68.53:0,69,523	0/0:24,0:24:41.69:0,42,323	0/1:25,0:22:10.43:10,0,275	0/0:28,0:27:50.66:0,51,398	0/0:81,0:80:99:0,105,872	1/1:26,1:28:59.14:524,59,0	1/1:15,1:16:28.47:183,28,0	1/1:39,3:42:48.42:439,48,0	1/1:17,0:17:40.88:383,41,0	0/0:40,0:38:49.08:0,49,595	0/0:20,0:19:47.55:0,48,335	0/1:11,0:12:10.01:189,0,10
chr10	93193196	.	CAT	C	5649.18	PASS	AB=0.994;AC=35;AF=0.625;AN=56;BaseQRankSum=13.999;DP=921;FS=19.729;HRun=0;HaplotypeScore=200.4193;InbreedingCoeff=-0.2457;MQ=52.39;MQ0=16;MQRankSum=0.587;QD=7.00;ReadPosRankSum=10.856;VQSLOD=2.3749;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:58,0:58:99:245,0,132	0/1:13,0:13:0.37:93,0,0	0/0:53,0:20:34.73:0,35,502	0/0:61,0:22:23.12:0,23,437	0/1:27,0:27:99:120,0,132	1/1:6,18:24:28.38:218,28,0	1/1:30,3:33:42.45:317,42,0	0/1:15,0:15:27.91:156,0,28	0/1:40,1:41:86.43:150,0,86	0/1:34,0:34:99:190,0,162	0/1:20,0:20:65.42:65,0,66	1/1:44,0:43:66.57:553,67,0	1/1:22,0:22:48.31:410,48,0	1/1:20,0:21:46.62:322,47,0	0/1:56,0:55:99:269,0,133	0/1:34,0:34:77.73:187,0,78	0/1:37,0:37:99:152,0,100	0/1:23,0:23:26.80:100,0,27	0/1:25,0:22:61.49:61,0,143	0/1:28,0:27:97.04:97,0,105	0/1:82,0:81:99:233,0,158	1/1:27,0:27:58.72:426,59,0	1/1:16,0:16:28.83:162,29,0	1/1:41,0:41:50.32:393,50,0	1/1:16,1:17:37.02:288,37,0	0/1:40,0:38:99:157,0,179	0/1:18,0:18:1.46:123,0,1	0/1:10,0:11:10.02:161,0,10
chr10	93193198	.	TAC	T	9143.02	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=-5.436;DP=905;FS=15.692;HRun=0;HaplotypeScore=191.3501;InbreedingCoeff=0.4259;MQ=52.12;MQ0=16;MQRankSum=6.807;QD=12.51;ReadPosRankSum=8.278;VQSLOD=2.9623;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,48:57:81.12:964,81,0	1/1:4,9:13:24.07:291,24,0	0/0:50,0:17:23.91:0,24,313	0/0:60,0:21:29.52:0,30,384	1/1:9,18:27:42.09:493,42,0	0/1:25,0:25:14:55,0,14	0/0:34,0:34:5.36:0,5,33	0/0:13,0:13:9.02:0,9,98	1/1:9,32:41:33.97:486,34,0	1/1:10,23:33:60.18:722,60,0	1/1:6,13:19:23.37:270,23,0	0/1:43,0:42:8.31:8,0,90	0/1:20,0:20:18.76:65,0,19	1/1:20,0:20:3.80:25,4,0	1/1:10,47:56:93.25:1112,93,0	1/1:8,27:35:56.52:664,57,0	1/1:8,28:36:48.15:582,48,0	1/1:4,20:24:33.10:399,33,0	1/1:10,13:21:38.70:398,39,0	1/1:10,17:27:32.96:367,33,0	1/1:14,63:76:78.82:940,79,0	1/1:26,0:27:7.67:43,8,0	0/0:17,0:17:4.42:0,4,27	0/1:43,0:43:5.27:5,0,15	0/1:18,0:18:29.22:29,0,44	1/1:10,26:34:63.11:716,63,0	1/1:3,15:18:42.09:493,42,0	0/1:10,0:10:15.26:15,0,61
chr10	93193223	.	ACT	A	425.01	PASS	AB=0.945;AC=9;AF=0.161;AN=56;BaseQRankSum=9.341;DP=902;FS=23.829;HRun=0;HaplotypeScore=225.1158;InbreedingCoeff=0.1440;MQ=55.40;MQ0=12;MQRankSum=-8.418;QD=2.17;ReadPosRankSum=-0.569;VQSLOD=1.2134;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,105,1377	0/0:12,0:12:30.08:0,30,410	0/0:60,0:23:62.05:0,62,773	0/0:63,0:32:67.49:0,67,1061	0/0:21,0:21:60.11:0,60,822	1/1:27,1:28:35.67:276,36,0	0/1:14,23:37:3.34:76,0,3	0/0:17,0:17:20.61:0,21,347	0/0:34,0:34:32.44:0,32,634	0/0:31,0:30:78:0,78,1076	0/0:14,0:14:27.06:0,27,360	0/0:43,0:42:4.49:0,4,339	0/1:21,0:21:99:106,0,132	0/1:19,0:19:15.06:15,0,55	0/0:49,0:48:99:0,110,1480	0/0:38,0:38:82.21:0,82,1107	0/0:37,0:37:75.07:0,75,968	0/0:25,0:25:49.81:0,50,625	0/0:25,0:23:62.28:0,62,809	0/0:19,0:19:39.32:0,39,514	0/0:91,0:91:99:0,159,2455	0/1:25,0:25:43.83:44,0,93	0/1:17,0:17:0.92:1,0,70	0/1:42,0:42:20.35:20,0,237	0/0:19,0:19:8.16:0,8,271	0/0:36,0:34:93.14:0,93,1367	0/0:17,0:17:44.95:0,45,555	0/1:7,0:7:27.04:27,0,81
chr10	93193225	.	T	TCA	5033.57	PASS	AB=0.764;AC=20;AF=0.357;AN=56;BaseQRankSum=4.388;DP=910;FS=1.783;HRun=0;HaplotypeScore=213.0717;InbreedingCoeff=0.8112;MQ=55.74;MQ0=12;MQRankSum=-5.768;QD=18.17;ReadPosRankSum=-1.007;VQSLOD=4.8351;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:92.89:0,93,1169	0/0:12,0:12:27.06:0,27,325	0/0:58,0:22:38.83:0,39,512	0/0:63,0:32:68.67:0,69,799	0/0:21,0:21:54.17:0,54,678	0/1:25,0:28:11.87:35,0,12	1/1:36,0:36:2.67:32,3,0	1/1:3,15:18:45.15:699,45,0	0/0:35,0:35:33.27:0,33,609	0/0:32,0:31:66.21:0,66,824	0/0:15,0:15:24.08:0,24,303	1/1:10,34:44:71.87:1190,72,0	1/1:4,16:20:39.13:631,39,0	1/1:5,15:20:12.04:200,12,0	0/0:50,0:49:99:0,105,1322	0/0:39,0:39:78.19:0,78,940	0/0:36,0:36:63.59:0,64,754	0/0:26,0:26:48.02:0,48,549	0/0:25,0:23:51.16:0,51,636	0/0:19,0:19:35.93:0,36,440	0/0:92,0:92:99:0,159,1940	1/1:8,14:22:21.07:335,21,0	1/1:6,11:18:15.52:250,16,0	1/1:5,38:43:54.17:892,54,0	0/1:8,12:20:36.18:507,0,36	0/0:37,0:35:87.27:0,87,1083	0/0:19,0:19:51.13:0,51,613	1/1:2,5:7:18.04:264,18,0
chr10	93193894	.	GTGTGTCATTGAGTCCATCCA	G	736.66	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.370;DP=779;FS=2.083;HRun=0;HaplotypeScore=383.1984;InbreedingCoeff=0.9657;MQ=76.88;MQ0=0;MQRankSum=0.257;QD=16.37;ReadPosRankSum=0.378;VQSLOD=1.2437;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,132,8552	0/0:13,0:13:30.09:0,30,2010	0/0:34,0:32:34.97:0,35,406	0/0:20,0:20:20.29:0,20,309	0/0:18,0:18:48.12:0,48,3145	1/1:8,13:21:9.03:480,9,0	1/1:24,0:24:33:371,33,0	0/0:29,0:29:45.07:0,45,605	0/0:31,0:31:78.19:0,78,4429	0/0:36,0:36:75.21:0,75,4356	0/0:14,0:14:36.10:0,36,2700	0/0:19,0:19:39.09:0,39,2354	0/0:30,0:30:78.14:0,78,4774	0/0:33,0:33:78.21:0,78,5013	0/0:29,0:29:66.19:0,66,4308	0/0:24,0:24:42.10:0,42,2373	0/0:41,0:41:96.16:0,96,5931	0/0:34,0:34:54.12:0,54,3458	0/0:20,0:20:33.06:0,33,1530	0/0:17,0:17:33.08:0,33,1548	0/0:52,0:52:99:0,132,7701	0/0:18,0:18:38.95:0,39,1672	0/0:15,0:15:33.03:0,33,1438	0/0:45,0:45:99:0,99,5791	0/0:22,0:22:60.17:0,60,3696	0/0:36,0:36:93.16:0,93,3939	0/0:27,0:27:51.08:0,51,3174	0/0:18,0:18:45.12:0,45,2995
chr10	93194798	.	TCCTG	T	1102.80	PASS	AB=1.000;AC=31;AF=0.738;AN=42;BaseQRankSum=1.922;DP=422;FS=1.153;HRun=0;HaplotypeScore=90.4656;InbreedingCoeff=0.3265;MQ=67.88;MQ0=10;MQRankSum=-2.348;QD=3.84;ReadPosRankSum=1.202;VQSLOD=1.8654;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,4:26:5.99:92,6,0	./.	0/1:17,0:9:0:0,0,0	./.	./.	0/1:18,0:18:1.91:2,0,282	0/1:24,0:23:19.66:20,0,42	0/1:15,0:15:0:0,0,0	1/1:16,7:23:9.03:137,9,0	1/1:6,1:7:3.01:46,3,0	./.	1/1:15,0:15:6.01:56,6,0	1/1:18,0:18:12.01:112,12,0	1/1:31,0:29:27.03:251,27,0	0/0:10,0:10:3.01:0,3,52	1/1:6,2:8:6.02:92,6,0	0/0:20,0:20:15.05:0,15,285	0/0:23,0:24:12:0,12,146	./.	1/1:11,0:11:2.97:20,3,0	1/1:26,8:33:6.02:92,6,0	./.	1/1:7,0:7:9.01:84,9,0	./.	1/1:7,0:7:3:28,3,0	1/1:4,2:6:6.02:92,6,0	1/1:6,4:10:6.02:92,6,0	0/1:10,0:10:18.68:19,0,194
chr10	93194829	.	TGCC	T	206.67	PASS	AB=0.782;AC=4;AF=0.071;AN=56;BaseQRankSum=7.163;DP=406;FS=35.148;HRun=0;HaplotypeScore=87.6996;InbreedingCoeff=-0.1239;MQ=51.72;MQ0=25;MQRankSum=-2.244;QD=3.23;ReadPosRankSum=7.078;VQSLOD=-0.6518;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:40.15:0,40,568	0/0:3,0:3:9.03:0,9,151	0/0:7,0:2:3.45:0,3,23	0/0:11,0:9:24.04:0,24,289	0/0:2,0:1:3.01:0,3,39	0/0:24,0:23:57.40:0,57,891	0/0:29,0:25:75.06:0,75,968	0/0:7,0:6:18.06:0,18,230	0/0:16,0:16:13.13:0,13,328	0/0:8,0:7:11.31:0,11,178	0/0:6,0:3:2.99:0,3,24	0/1:10,2:12:19.60:20,0,243	0/1:8,4:12:64.19:64,0,221	0/1:20,10:28:99:175,0,366	0/0:15,0:14:21.07:0,21,293	0/0:8,0:8:8.80:0,9,220	0/0:21,0:21:27.07:0,27,504	0/0:30,0:30:30.08:0,30,473	0/0:8,0:6:16.29:0,16,187	0/0:6,0:5:11.90:0,12,100	0/0:39,0:33:56.90:0,57,790	0/0:16,0:15:35.64:0,36,391	0/1:7,3:10:54.68:55,0,119	0/0:20,2:22:1.72:0,2,331	0/0:9,0:9:11.03:0,11,261	0/0:6,0:6:2.58:0,3,117	0/0:18,0:18:29.94:0,30,491	0/0:8,0:7:20.43:0,20,347
chr10	93194833	.	TGCCTGCCTGCCTG	T	1624.88	PASS	AB=0.853;AC=6;AF=0.107;AN=56;BaseQRankSum=9.262;DP=399;FS=27.714;HRun=0;HaplotypeScore=145.5455;InbreedingCoeff=-0.1422;MQ=52.32;MQ0=20;MQRankSum=-7.595;QD=16.93;ReadPosRankSum=5.099;VQSLOD=1.1181;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:63.21:0,63,1222	0/0:3,0:3:9.03:0,9,292	0/0:6,0:2:3.37:0,3,17	0/0:11,0:8:21.07:0,21,311	0/0:2,0:1:3.01:0,3,72	0/0:21,0:20:57.19:0,57,1925	0/0:29,0:25:75.24:0,75,1821	0/0:9,0:8:24.07:0,24,339	0/0:15,0:15:32.71:0,33,832	0/0:8,0:7:21.07:0,21,378	0/0:5,0:3:3.01:0,3,44	0/1:9,2:11:86.09:192,0,86	0/1:10,4:14:99:336,0,156	0/1:20,10:28:99:800,0,168	0/0:16,0:15:18.05:0,18,555	0/0:8,0:8:24.08:0,24,606	0/0:20,0:20:24.08:0,24,1168	0/0:31,0:31:30.01:0,30,924	0/0:4,0:4:12.04:0,12,217	0/0:8,0:7:18.06:0,18,298	0/0:36,0:31:66.20:0,66,1225	0/0:16,0:15:14.60:0,15,239	0/1:8,2:10:19.34:299,0,19	0/1:18,2:20:36.64:37,0,122	0/1:11,0:11:84.38:84,0,114	0/0:7,0:7:21.07:0,21,511	0/0:16,0:16:40.02:0,40,701	0/0:7,0:6:18.06:0,18,822
chr10	93194850	.	G	GCCTGCCTT	2905.94	PASS	AB=0.940;AC=22;AF=0.393;AN=56;BaseQRankSum=0.042;DP=400;FS=9.662;HRun=0;HaplotypeScore=112.7087;InbreedingCoeff=0.3605;MQ=63.23;MQ0=10;MQRankSum=1.819;QD=11.81;ReadPosRankSum=-0.605;VQSLOD=1.6902;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:53.76:0,54,507	1/1:4,0:4:11.99:101,12,0	0/1:6,0:3:4.65:5,0,30	0/0:14,0:12:28.70:0,29,289	0/0:2,0:2:5.99:0,6,50	0/1:27,0:27:99:334,0,213	0/1:28,0:25:13.63:471,0,14	1/1:7,0:6:14.98:131,15,0	0/0:15,0:15:29.89:0,30,360	0/0:10,0:10:29.99:0,30,307	0/0:8,0:6:11.99:0,12,100	1/1:11,0:11:10.09:165,10,0	0/1:16,0:16:70.97:249,0,71	0/1:27,0:25:99:295,0,208	1/1:2,14:15:3.01:132,3,0	0/0:7,0:7:21:0,21,258	0/1:2,0:22:52.59:77,0,53	1/1:1,23:27:9:286,9,0	0/0:6,0:6:11.27:0,11,103	0/0:7,0:7:8.92:0,9,75	0/0:28,0:27:53.24:0,53,531	1/1:14,0:14:35.46:276,35,0	0/1:14,0:14:10.73:159,0,11	1/1:17,0:17:32.50:219,32,0	0/1:10,0:10:5.55:196,0,6	0/0:10,0:10:23.73:0,24,282	0/0:18,0:18:41.94:0,42,423	0/0:7,0:6:13.29:0,13,294
chr10	93194984	.	TA	T	1007.25	PASS	AB=0.683;AC=26;AF=0.464;AN=56;BaseQRankSum=4.014;DP=394;FS=15.093;HRun=16;HaplotypeScore=65.0848;InbreedingCoeff=0.5027;MQ=72.28;MQ0=1;MQRankSum=-1.808;QD=4.34;ReadPosRankSum=3.046;VQSLOD=0.0815;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:30:28.46:0,28,245	1/1:0,0:5:6.95:19,7,0	0/0:22,0:10:11.75:0,12,80	0/0:17,1:10:4.24:0,4,102	0/1:4,1:10:3.40:3,0,54	1/1:8,12:21:9.12:111,9,0	1/1:3,8:11:20.54:126,21,0	1/1:9,0:24:26.36:76,26,0	0/0:3,0:10:20.19:0,20,119	0/0:5,0:16:34.45:0,34,185	0/0:3,0:6:14.44:0,14,84	1/1:1,8:10:16.72:95,17,0	0/1:3,6:10:5.53:76,0,6	0/1:13,4:18:31.41:47,0,31	1/1:5,0:13:10.09:29,10,0	0/0:2,0:5:2.84:0,3,14	1/1:7,0:20:31.15:89,31,0	1/1:7,1:15:17.12:59,17,0	0/0:4,1:10:5.52:0,6,116	0/0:2,0:3:5.84:0,6,39	0/0:5,0:14:23.18:0,23,143	0/1:5,12:18:27.45:138,0,27	1/1:5,7:15:24.16:126,24,0	0/1:4,10:14:20.72:114,0,21	0/1:10,9:19:5.47:72,0,5	0/0:7,0:15:26.30:0,26,169	0/0:5,0:13:20.02:0,20,106	1/1:4,0:8:8.09:23,8,0
chr10	93195255	.	AAGAG	A	218.72	PASS	AB=0.778;AC=3;AF=0.068;AN=44;BaseQRankSum=-1.475;DP=419;FS=16.692;HRun=0;HaplotypeScore=91.7464;InbreedingCoeff=0.2487;MQ=57.89;MQ0=12;MQRankSum=1.475;QD=4.75;ReadPosRankSum=-1.046;VQSLOD=0.7165;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:5.99:0,6,70	0/0:2,0:2:3:0,3,27	./.	./.	0/0:9,0:9:5.99:0,6,62	0/0:10,0:10:9.03:0,9,161	1/1:19,6:25:13.23:155,13,0	0/0:27,0:27:10.27:0,10,115	0/0:12,0:11:3.01:0,3,48	0/0:12,0:12:16.24:0,16,145	./.	0/0:14,0:14:8.81:0,9,107	0/0:13,0:12:15.05:0,15,203	0/0:21,0:21:18.06:0,18,259	0/0:18,0:18:15.05:0,15,221	0/0:9,0:9:3.01:0,3,49	0/1:15,6:20:20.92:160,0,21	0/0:29,0:27:42.14:0,42,693	0/0:10,0:10:6.02:0,6,81	0/0:10,0:10:3.01:0,3,50	0/0:27,0:26:21.03:0,21,293	./.	0/0:9,0:9:15.03:0,15,185	0/0:22,0:20:21.06:0,21,290	0/0:19,0:19:6.02:0,6,94	0/0:12,0:12:13.81:0,14,140	./.	./.
chr10	93195287	.	G	GAGAGAGAGAA	340.76	PASS	AB=0.948;AC=8;AF=0.143;AN=56;BaseQRankSum=3.794;DP=551;FS=74.243;HRun=0;HaplotypeScore=167.9475;InbreedingCoeff=-0.1739;MQ=50.49;MQ0=12;MQRankSum=2.592;QD=2.09;ReadPosRankSum=4.990;VQSLOD=0.2373;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,13:31:16.49:152,0,16	0/1:2,0:2:15.49:15,0,19	0/0:7,0:3:4.40:0,4,48	0/0:18,0:3:6.01:0,6,65	0/0:14,0:13:23.53:0,24,188	0/0:16,0:16:26.98:0,27,269	0/0:23,0:23:31.99:0,32,417	0/0:37,0:36:57.74:0,58,397	0/1:14,0:13:7.03:7,0,102	0/0:27,0:27:29.69:0,30,493	0/0:13,0:13:22.88:0,23,190	0/0:18,0:18:33.38:0,33,256	0/0:19,0:18:13.35:0,13,81	0/0:26,0:26:2.89:0,3,179	0/1:26,0:26:19.77:20,0,305	0/0:14,0:14:3.55:0,4,176	0/0:32,0:32:52.83:0,53,632	0/0:31,0:29:56.62:0,57,560	0/1:21,0:21:47.24:47,0,238	0/1:13,0:13:40.42:42,0,40	0/1:35,0:34:99:181,0,191	0/0:12,0:11:20.94:0,21,168	0/0:19,0:18:28.99:0,29,243	0/0:23,0:22:17.69:0,18,289	0/1:20,0:19:0.90:1,0,149	0/0:15,0:15:20.92:0,21,214	0/0:14,0:13:16.84:0,17,116	0/0:10,0:8:11.56:0,12,90
chr10	93195426	.	A	ATT	359.54	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.455;DP=491;FS=10.634;HRun=9;HaplotypeScore=101.8422;InbreedingCoeff=0.9838;MQ=81.35;MQ0=0;MQRankSum=-2.771;QD=32.69;ReadPosRankSum=3.343;VQSLOD=2.8460;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:31.03:0,31,711	0/0:8,0:8:21.03:0,21,220	0/0:15,0:15:29.95:0,30,310	0/0:22,0:22:50.82:0,51,498	0/0:16,0:16:42.02:0,42,410	0/0:24,0:24:53.99:0,54,560	0/0:17,0:17:39:0,39,392	0/0:30,0:30:78.06:0,78,792	0/0:12,0:12:33.04:0,33,339	0/0:16,0:16:48.10:0,48,490	0/0:15,0:15:39.07:0,39,415	0/0:14,0:14:39.08:0,39,407	0/0:18,0:17:42.04:0,42,447	0/0:20,0:20:57.13:0,57,598	0/0:23,0:23:63.13:0,63,663	0/0:8,0:8:21.03:0,21,216	0/0:34,0:34:87.01:0,87,877	0/0:14,0:14:42.06:0,42,427	0/0:23,0:25:43.17:0,43,563	0/0:12,0:12:36.03:0,36,362	0/0:8,0:8:21.05:0,21,224	0/0:19,0:19:57.05:0,57,559	0/0:17,0:17:41.59:0,42,424	0/0:10,0:10:27.01:0,27,279	0/0:19,0:19:51.06:0,51,535	0/0:23,0:23:63.14:0,63,665	0/0:10,0:10:27.07:0,27,287	1/1:2,9:11:30.10:454,30,0
chr10	93196072	.	CTTT	C	13354.47	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-1.519;DP=550;FS=33.245;HRun=12;HaplotypeScore=87.8608;InbreedingCoeff=0.9132;MQ=61.49;MQ0=2;MQRankSum=-1.260;QD=26.39;ReadPosRankSum=5.681;VQSLOD=1.4187;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,40:43:99:1229,99,0	1/1:2,7:9:19.85:246,20,0	0/0:6,0:6:8.64:0,9,108	0/0:9,0:5:12.01:0,12,164	1/1:6,15:21:20.94:265,21,0	1/1:4,27:30:69.13:851,69,0	1/1:4,18:22:45.09:551,45,0	0/0:22,0:28:60.13:0,60,954	1/1:2,16:18:32.62:417,33,0	1/1:3,15:18:45.11:569,45,0	1/1:1,16:18:32.99:397,33,0	1/1:5,18:23:51.12:644,51,0	1/1:2,15:17:34.95:453,35,0	1/1:1,13:14:33.10:417,33,0	1/1:1,20:21:51.16:644,51,0	1/1:3,16:19:36.10:455,36,0	1/1:4,32:36:93.25:1175,93,0	1/1:7,17:24:48.10:607,48,0	1/1:3,10:13:30.04:363,30,0	1/1:3,13:17:25.61:338,26,0	1/1:6,24:33:51.22:674,51,0	1/1:2,17:19:42.05:513,42,0	1/1:0,10:11:19.58:245,20,0	1/1:3,17:20:40.40:528,40,0	1/1:2,16:18:39.09:490,39,0	1/1:1,16:17:48.15:606,48,0	1/1:2,17:19:48.15:607,48,0	1/1:1,3:5:4.59:73,5,0
chr10	93197341	.	AACACAGTCACACAC	A	14408.63	PASS	AB=0.531;AC=35;AF=0.625;AN=56;BaseQRankSum=6.903;DP=714;FS=3.174;HRun=0;HaplotypeScore=286.3987;InbreedingCoeff=0.9046;MQ=58.92;MQ0=5;MQRankSum=-12.185;QD=40.36;ReadPosRankSum=2.241;VQSLOD=4.0344;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:48:99:0,114,6230	0/0:1,0:12:30.07:0,30,1577	0/0:42,0:32:80.32:0,80,2839	0/0:62,0:42:99:0,105,3716	1/1:0,11:11:6.02:180,6,0	0/0:3,0:25:51.18:0,51,2304	0/0:3,0:37:78.27:0,78,3788	0/0:39,0:40:59.38:0,59,4675	1/1:1,25:26:30.06:834,30,0	1/1:1,23:24:63.17:2020,63,0	1/1:1,14:15:2.79:125,3,0	1/1:0,21:21:45.09:1435,45,0	1/1:2,22:24:39.13:1607,39,0	1/1:1,23:24:33.11:1274,33,0	0/0:6,0:33:72.08:0,72,3775	1/1:1,17:18:27.02:709,27,0	0/0:34,0:34:63.19:0,63,5754	0/0:1,0:21:36.99:0,37,2445	1/1:1,14:15:42.09:891,42,0	1/1:2,11:13:15.05:481,15,0	0/1:4,30:34:0:1,0,0	1/1:0,23:23:11.95:290,12,0	1/1:0,16:16:18.02:414,18,0	1/1:1,27:28:20.87:237,21,0	1/1:0,11:11:6.02:250,6,0	1/1:0,20:20:51.62:1731,52,0	1/1:1,19:20:38.80:1431,39,0	1/1:1,13:14:12.04:500,12,0
chr10	93197346	.	AG	A	598.90	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=14.264;DP=701;FS=4.338;HRun=1;HaplotypeScore=202.1283;InbreedingCoeff=0.7040;MQ=58.72;MQ0=6;MQRankSum=-10.369;QD=1.90;ReadPosRankSum=6.868;VQSLOD=-0.7188;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:99:0,113,803	0/0:12,0:12:30.26:0,30,235	0/0:44,0:27:81.16:0,81,1172	0/0:70,1:45:96.92:0,97,1519	0/1:11,0:11:1.49:3,0,1	0/0:26,0:26:53.70:0,54,467	0/0:35,0:35:83.37:0,83,609	0/0:43,1:44:97.51:0,98,1870	0/1:25,0:25:3.50:13,0,4	1/1:23,0:23:40.56:165,41,0	1/1:14,1:15:2.37:8,2,0	1/1:21,0:21:9.90:48,10,0	1/1:22,0:22:24.72:82,25,0	1/1:23,0:23:13.61:52,14,0	0/0:28,0:28:71.26:0,71,497	1/1:17,0:17:1:17,1,0	0/0:32,1:33:70.18:0,70,1458	0/0:20,0:20:46.70:0,47,382	1/1:14,0:14:24.19:137,24,0	1/1:11,0:11:1.71:14,2,0	0/1:30,0:30:0.01:0,0,0	1/1:23,0:23:4.74:15,5,0	0/1:16,0:16:4.63:5,0,6	0/0:27,0:27:7.99:0,8,24	1/1:11,0:11:4.74:16,5,0	1/1:20,0:20:33.93:108,34,0	1/1:19,1:20:23.02:80,23,0	1/1:13,0:13:9.33:30,9,0
chr10	93198689	.	CAGG	C	3734.36	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=1.535;DP=484;FS=11.124;HRun=0;HaplotypeScore=100.1925;InbreedingCoeff=-0.1476;MQ=76.10;MQ0=0;MQRankSum=-3.168;QD=10.43;ReadPosRankSum=9.363;VQSLOD=1.0044;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:47.13:753,47,0	1/1:0,5:5:6.49:109,6,0	0/0:13,0:12:32.28:0,32,410	0/0:19,0:19:32.65:0,33,395	0/1:9,0:9:56.01:71,0,56	0/0:17,0:17:46.17:0,46,287	0/0:38,0:38:99:0,100,569	0/1:24,0:24:99:163,0,128	1/1:23,0:23:10:298,10,0	0/1:7,0:7:34.83:55,0,35	0/1:5,0:5:4.16:71,0,4	0/1:18,0:18:71.60:72,0,100	0/1:18,0:18:34:144,0,34	0/1:22,0:22:46.39:187,0,46	1/1:0,8:8:21.07:382,21,0	0/1:16,0:16:31.90:168,0,32	0/0:38,0:38:99:0,103,602	0/1:33,0:33:92.15:256,0,92	0/1:21,0:21:99:116,0,122	0/1:6,0:6:18.20:38,0,18	0/1:42,0:42:99:149,0,185	1/1:8,0:8:20.60:143,21,0	1/1:4,0:4:5.69:32,6,0	0/1:19,0:19:18.76:171,0,19	0/1:9,0:9:5.22:102,0,5	0/1:11,0:11:76.52:96,0,77	0/1:10,0:10:49.03:49,0,87	1/1:6,0:6:17.63:110,18,0
chr10	93198690	.	AGGG	A	7792.13	PASS	AB=0.630;AC=45;AF=0.804;AN=56;BaseQRankSum=-11.594;DP=480;FS=8.455;HRun=10;HaplotypeScore=87.2905;InbreedingCoeff=0.8102;MQ=76.22;MQ0=0;MQRankSum=-4.335;QD=21.95;ReadPosRankSum=3.039;VQSLOD=2.7758;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:41.17:442,41,0	1/1:5,0:5:6.49:70,6,0	0/0:12,0:12:20.50:0,21,247	0/0:19,0:19:7.70:0,8,366	1/1:1,8:9:12.02:164,12,0	0/0:8,0:17:14.21:0,14,50	0/0:6,0:38:46.17:0,46,141	1/1:7,17:24:45.08:562,45,0	1/1:5,18:23:54.17:729,54,0	1/1:2,5:7:15.04:205,15,0	1/1:1,4:5:12.04:164,12,0	0/1:7,10:17:4.90:186,0,5	1/1:5,13:18:30.04:381,30,0	1/1:6,16:22:42.10:559,42,0	1/1:8,0:8:21.04:217,21,0	1/1:3,13:16:39.06:509,39,0	0/0:8,0:37:40.88:0,41,129	1/1:7,26:33:19.47:775,19,0	1/1:9,12:21:38.77:426,39,0	1/1:0,6:6:9.02:123,9,0	1/1:12,30:42:34.30:482,34,0	1/1:0,8:8:21.07:286,21,0	1/1:0,4:4:6.02:82,6,0	1/1:3,16:19:36.11:491,36,0	1/1:1,8:9:18.06:245,18,0	1/1:4,7:11:21.06:286,21,0	1/1:4,4:8:12.01:164,12,0	1/1:0,6:6:18.06:245,18,0
chr10	93198698	.	GGGA	G	2862.40	PASS	AB=0.979;AC=31;AF=0.554;AN=56;BaseQRankSum=-1.173;DP=438;FS=2.014;HRun=0;HaplotypeScore=97.3257;InbreedingCoeff=-0.0828;MQ=73.90;MQ0=0;MQRankSum=-3.266;QD=8.89;ReadPosRankSum=7.577;VQSLOD=2.5759;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:39.85:122,0,40	0/1:6,0:6:16.76:19,0,17	0/0:9,0:8:20.71:0,21,242	0/0:20,0:19:17.06:0,17,336	0/1:9,0:9:10.14:63,0,10	0/0:13,0:13:21.60:0,22,115	0/0:41,0:41:71.77:0,72,300	0/1:19,0:19:15.68:186,0,16	0/1:21,3:24:12.36:327,0,12	0/1:6,0:6:11.93:45,0,12	1/1:4,0:4:11.72:72,12,0	0/1:14,1:15:28.98:101,0,29	0/1:15,1:16:16.99:185,0,17	1/1:18,1:19:4.33:258,4,0	1/1:8,0:8:13.39:60,13,0	1/1:14,0:14:13.22:193,13,0	0/0:33,0:33:61.59:0,62,214	0/1:29,0:29:13.99:284,0,14	0/1:17,1:18:24.51:166,0,25	0/1:6,0:6:6.23:37,0,6	0/1:34,1:35:30.64:170,0,31	1/1:9,0:9:1.69:117,2,0	0/1:6,0:6:21.12:21,0,38	0/1:18,0:18:8.48:188,0,8	0/1:9,0:9:3.28:104,0,3	1/1:7,0:7:20.28:131,20,0	1/1:4,0:4:11.86:87,12,0	1/1:6,0:6:17.57:103,18,0
chr10	93198699	.	GGA	G	579.90	PASS	AB=0.976;AC=8;AF=0.143;AN=56;BaseQRankSum=-5.655;DP=432;FS=16.216;HRun=0;HaplotypeScore=98.3589;InbreedingCoeff=0.0551;MQ=72.09;MQ0=0;MQRankSum=2.279;QD=3.84;ReadPosRankSum=0.955;VQSLOD=1.3044;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:34.53:0,35,183	0/0:6,0:6:6.42:0,6,37	0/0:8,0:7:12.10:0,12,163	0/0:18,0:17:18.80:0,19,272	0/0:10,0:10:8.55:0,9,63	0/1:11,1:12:18.76:95,0,19	0/1:37,3:40:29.13:258,0,29	0/0:19,0:19:18.51:0,19,106	0/0:24,0:24:3.97:0,4,103	0/0:6,0:6:16.14:0,16,83	0/0:4,0:4:6.48:0,6,21	0/1:15,0:15:6.20:6,0,50	0/1:16,0:16:10.16:10,0,50	0/1:19,0:19:4.78:5,0,71	0/0:8,0:8:12.80:0,13,54	0/0:14,0:14:20.81:0,21,85	1/1:30,1:31:51.10:298,51,0	0/0:29,0:29:42.48:0,42,173	0/1:18,0:18:38.71:39,0,97	0/0:7,0:7:12.41:0,12,64	0/0:35,0:35:24.43:0,24,138	0/0:9,0:9:9.21:0,9,46	0/0:6,0:6:10.25:0,10,63	0/0:18,0:18:19.06:0,19,99	0/0:9,0:9:2.45:0,2,38	0/0:7,0:7:2.97:0,3,31	0/0:4,0:4:0.39:0,0,6	0/0:6,0:6:11.70:0,12,36
chr10	93199111	.	CTT	C	1802.80	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.915;DP=456;FS=10.287;HRun=3;HaplotypeScore=81.8685;InbreedingCoeff=0.9609;MQ=50.48;MQ0=20;MQRankSum=-8.915;QD=22.26;ReadPosRankSum=0.215;VQSLOD=0.7528;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:25:51.17:775,51,0	1/1:0,3:3:8.92:107,9,0	0/0:22,0:7:9.03:0,9,151	0/0:27,0:9:26.94:0,27,410	0/0:12,0:12:30.09:0,30,547	0/0:7,0:7:21.07:0,21,406	0/0:25,0:25:75.26:0,75,1439	1/1:1,14:9:21.07:314,21,0	0/0:15,0:15:45.15:0,45,869	0/0:11,0:11:30.10:0,30,570	0/0:4,0:4:12.04:0,12,232	0/0:12,0:12:36.12:0,36,695	0/0:15,0:15:39.13:0,39,734	0/0:10,0:10:30.10:0,30,554	1/1:1,14:11:24.08:366,24,0	0/0:14,0:14:42.13:0,42,742	1/1:0,19:15:27.09:412,27,0	0/0:25,0:25:72.20:0,72,1301	0/0:23,0:15:45.10:0,45,763	0/0:9,0:9:24.08:0,24,453	0/0:50,0:50:99:0,151,2818	0/0:13,0:13:39.06:0,39,678	0/0:16,0:16:48.07:0,48,819	0/0:19,0:19:54.19:0,54,1043	0/0:7,0:7:21.04:0,21,353	0/0:16,0:16:48.15:0,48,867	0/0:13,0:13:39.13:0,39,753	0/0:10,0:10:30.10:0,30,578
chr10	93199479	.	CT	C	255.14	PASS	AB=0.797;AC=4;AF=0.167;AN=24;BaseQRankSum=-3.150;DP=280;FS=17.547;HRun=14;HaplotypeScore=40.1773;InbreedingCoeff=0.3813;MQ=79.54;MQ0=5;MQRankSum=-2.917;QD=5.10;ReadPosRankSum=2.983;VQSLOD=0.5955;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:30,0:21:16.66:0,17,140	0/0:25,0:13:18.22:0,18,127	./.	1/1:6,12:18:20.75:144,21,0	0/1:7,14:21:14.97:191,0,15	0/0:12,0:11:0:0,0,0	./.	./.	./.	./.	./.	./.	0/0:9,0:9:0:0,0,0	0/1:10,0:10:0:0,0,0	./.	0/0:7,0:7:0:0,0,0	./.	0/0:4,0:4:0:0,0,0	./.	./.	./.	./.	0/0:1,0:1:0:0,0,0	0/0:9,0:8:0:0,0,0	./.	0/0:6,0:6:0.94:0,1,1
chr10	93202509	.	TTTTTATTTTATTTTA	T	2971.62	PASS	AB=0.720;AC=31;AF=0.816;AN=38;BaseQRankSum=0.672;DP=298;FS=0.000;HRun=0;HaplotypeScore=113.6258;InbreedingCoeff=0.3432;MQ=58.55;MQ0=4;MQRankSum=-2.543;QD=15.64;ReadPosRankSum=2.306;VQSLOD=1.7004;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,5:11:3.01:123,3,0	1/1:1,4:5:3.01:123,3,0	./.	./.	./.	0/1:11,0:18:8.17:8,0,52	0/0:6,0:6:3.01:0,3,78	0/0:33,0:31:20.72:0,21,188	1/1:4,2:6:3.01:123,3,0	1/1:9,3:11:6.02:246,6,0	1/1:9,5:14:9.03:370,9,0	./.	1/1:2,3:5:6.02:246,6,0	./.	1/1:5,3:8:9.03:370,9,0	1/1:2,3:5:3.01:123,3,0	1/1:15,0:27:3.01:105,3,0	1/1:15,5:20:12.04:452,12,0	1/1:20,4:24:12.04:266,12,0	1/1:6,1:7:3.01:123,3,0	./.	1/1:4,1:5:3.01:123,3,0	./.	./.	1/1:11,0:11:3.01:44,3,0	./.	1/1:9,3:12:6.02:246,6,0	0/0:12,0:12:9.03:0,9,179
chr10	93202515	.	TTTTA	T	1098.94	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=9.295;DP=268;FS=62.912;HRun=0;HaplotypeScore=54.4171;InbreedingCoeff=-0.2255;MQ=54.36;MQ0=6;MQRankSum=-2.202;QD=6.50;ReadPosRankSum=-0.061;VQSLOD=-0.5215;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:10.39:10,0,90	0/1:5,0:5:13.36:13,0,59	0/0:7,0:6:17.26:0,17,176	0/0:13,0:3:9.02:0,9,99	0/0:7,0:7:17.99:0,18,194	0/1:16,0:16:58.12:58,0,267	0/0:4,0:4:12.03:0,12,136	1/1:7,24:29:72.18:944,72,0	0/1:5,0:5:10.35:10,0,90	0/1:10,0:9:26.65:27,0,112	0/1:12,0:12:34.02:34,0,239	0/0:3,0:3:9.03:0,9,102	0/1:5,0:5:25.06:36,0,25	0/0:3,0:3:6.02:0,6,68	0/1:6,0:6:52.14:52,0,53	0/1:5,0:5:13.36:13,0,59	0/0:26,0:26:20.95:0,21,439	0/1:19,0:19:22.08:22,0,346	0/1:21,0:19:3.24:3,0,356	0/1:7,0:7:1.34:1,0,173	0/0:2,0:2:6.02:0,6,68	0/1:4,0:4:10.38:10,0,90	0/0:2,0:2:6.02:0,6,68	0/0:2,0:2:6.02:0,6,68	0/0:9,0:9:27.07:0,27,297	0/0:9,0:9:24.07:0,24,272	0/1:12,0:12:17.78:18,0,211	0/0:12,0:12:26.25:0,26,304
chr10	93203848	.	GA	G	2199.03	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.481;DP=644;FS=1.065;HRun=1;HaplotypeScore=72.6884;InbreedingCoeff=0.9990;MQ=88.82;MQ0=1;MQRankSum=-4.227;QD=33.83;ReadPosRankSum=3.300;VQSLOD=3.6666;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:69.23:963,69,0	1/1:0,9:9:24.08:335,24,0	0/0:27,0:26:75.22:0,75,1083	0/0:39,0:39:99:0,102,1302	0/0:20,0:20:57.18:0,57,844	0/0:18,0:18:54.18:0,54,826	0/0:23,0:24:47.07:0,47,940	0/0:28,0:28:84.10:0,84,1128	0/0:23,0:23:69.18:0,69,972	0/0:20,0:20:60.17:0,60,841	0/0:14,0:14:39.13:0,39,591	0/0:30,0:30:87.28:0,87,1309	0/0:22,0:22:63.18:0,63,913	0/0:20,0:20:60.17:0,60,872	1/1:0,27:27:75.25:1043,75,0	0/0:22,0:22:63.20:0,63,940	0/0:26,0:26:78.18:0,78,1120	0/0:23,0:23:66.21:0,66,988	0/0:23,0:23:69.22:0,69,1025	0/0:19,0:19:54.17:0,54,789	0/0:41,0:41:99:0,120,1794	0/0:18,0:18:51.17:0,51,779	0/0:14,0:14:39.12:0,39,562	0/0:36,0:36:99:0,108,1519	0/0:19,0:19:51.04:0,51,717	0/0:17,0:17:48.16:0,48,718	0/0:24,0:24:72.19:0,72,1049	0/0:11,0:11:30.10:0,30,455
chr10	93205340	.	C	CCGTG	5174.58	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=-2.854;DP=594;FS=0.502;HRun=0;HaplotypeScore=114.9917;InbreedingCoeff=0.6224;MQ=66.43;MQ0=8;MQRankSum=-0.647;QD=21.38;ReadPosRankSum=-0.407;VQSLOD=4.5113;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:11.57:0,12,96	0/1:3,0:3:15.96:28,0,16	0/0:26,0:18:36.02:0,36,344	0/0:24,0:13:23.17:0,23,269	0/0:26,0:26:25.49:0,25,266	0/0:13,0:13:3:0,3,25	0/1:26,0:26:25.65:26,0,42	0/0:24,0:23:46.07:0,46,396	0/0:12,0:12:16.89:0,17,250	0/0:21,0:21:25.81:0,26,289	0/0:16,0:16:16.44:0,16,269	1/1:6,21:28:31.18:863,31,0	1/1:6,13:22:33.11:828,33,0	1/1:4,15:22:15.65:588,16,0	0/1:13,0:13:45.69:53,0,46	0/0:11,0:11:10.91:0,11,125	0/0:41,0:40:23.62:0,24,320	0/0:31,0:31:19.92:0,20,296	0/0:17,0:17:23.74:0,24,211	0/0:17,0:17:20.42:0,20,223	0/0:35,0:34:45.83:0,46,480	1/1:10,1:11:17.96:299,18,0	1/1:12,2:15:8.99:172,9,0	1/1:7,33:40:25.66:1154,26,0	1/1:5,14:19:36.08:804,36,0	0/1:27,0:27:47.19:47,0,368	0/0:11,0:11:5.47:0,5,75	1/1:13,2:15:17.93:312,18,0
chr10	93205345	.	C	CGTGTGTGT	320.63	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=6.428;DP=607;FS=17.374;HRun=0;HaplotypeScore=168.0864;InbreedingCoeff=0.2209;MQ=65.39;MQ0=9;MQRankSum=-3.204;QD=2.61;ReadPosRankSum=2.308;VQSLOD=1.9978;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:12.04:0,12,175	0/1:3,0:3:10.98:65,0,11	0/0:25,0:17:44.07:0,44,639	0/0:23,0:13:39:0,39,561	0/0:26,0:26:54.04:0,54,817	./.	1/1:5,16:32:1.13:119,1,0	0/0:25,0:24:59.64:0,60,859	0/0:12,0:12:33.09:0,33,591	0/0:23,0:23:65.72:0,66,984	0/0:15,0:15:42.09:0,42,674	0/1:29,0:29:14.89:15,0,214	1/1:19,0:19:6.80:36,7,0	0/0:22,0:22:4.90:0,5,106	0/1:13,0:13:79.79:170,0,80	0/0:9,0:9:24.04:0,24,381	0/0:43,0:42:86.18:0,86,1062	0/0:31,0:31:75.10:0,75,1215	0/0:16,0:16:41.82:0,42,510	0/0:14,0:14:30.06:0,30,514	0/0:40,0:39:93.04:0,93,1480	0/1:11,0:11:3.15:3,0,84	0/0:15,0:15:14.36:0,14,102	0/0:46,0:44:26.74:0,27,339	0/0:19,0:19:11.83:0,12,46	0/0:28,0:28:58.82:0,59,948	0/0:10,0:10:20.75:0,21,253	0/1:16,0:16:42.88:43,0,83
chr10	93205351	.	T	TGC	3175.94	PASS	AB=0.960;AC=26;AF=0.464;AN=56;BaseQRankSum=9.538;DP=630;FS=4.110;HRun=0;HaplotypeScore=106.1281;InbreedingCoeff=-0.5264;MQ=59.72;MQ0=11;MQRankSum=-1.180;QD=5.94;ReadPosRankSum=10.392;VQSLOD=1.6835;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:11.98:0,12,97	0/1:5,0:5:2.59:3,0,17	0/0:23,0:12:36.02:0,36,344	0/0:25,0:12:22.46:0,22,268	0/1:26,0:26:98.72:99,0,248	0/0:20,0:20:5.99:0,6,50	0/1:26,0:26:0.20:0,0,42	0/1:22,0:21:37.69:38,0,319	0/1:12,0:12:54.71:55,0,218	0/1:26,0:26:99:110,0,335	0/1:16,0:16:36.94:37,0,213	0/1:30,2:32:98.08:415,0,98	1/1:18,1:19:11.03:298,11,0	0/1:24,0:24:96.73:225,0,97	0/1:13,0:13:2.19:2,0,50	0/1:10,0:10:63.97:64,0,96	0/1:49,0:48:99:179,0,336	0/1:29,0:29:99:241,0,265	0/1:21,0:21:21.01:21,0,202	0/1:17,0:17:33.10:33,0,181	0/1:46,0:45:99:153,0,483	0/1:5,6:11:23.68:163,0,24	0/1:6,9:16:96.05:96,0,111	0/1:46,2:46:99:505,0,318	1/1:18,2:20:16.13:388,16,0	0/1:24,0:25:52.41:52,0,407	0/1:9,0:9:32.29:32,0,57	0/1:13,0:13:28.78:127,0,29
chr10	93205379	.	T	TGTGTGTGTGTGC	577.45	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=1.817;DP=637;FS=11.490;HRun=0;HaplotypeScore=209.0075;InbreedingCoeff=0.4069;MQ=60.58;MQ0=8;MQRankSum=-4.086;QD=4.44;ReadPosRankSum=-4.713;VQSLOD=0.4780;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:40:3.01:44,3,0	1/1:0,0:8:3.48:128,3,0	0/0:23,0:3:6.01:0,6,59	0/1:31,0:8:2.02:2,0,18	0/0:22,0:22:47.74:0,48,674	0/0:15,0:15:3:0,3,25	0/1:21,0:21:19.01:66,0,19	0/0:17,0:17:18.06:0,18,384	0/0:17,0:17:44.95:0,45,758	0/0:26,0:26:5.59:0,6,845	0/0:12,0:12:30.04:0,30,577	0/0:29,0:29:54.80:0,55,809	0/0:20,0:21:8.53:0,9,321	0/0:24,0:24:50.86:0,51,567	1/1:1,11:19:9.03:408,9,0	0/0:9,0:9:24.04:0,24,412	0/0:42,0:43:18.20:0,18,668	0/0:31,0:31:77.27:0,77,1587	0/0:13,0:12:7.31:0,7,202	0/0:16,0:16:27.50:0,27,470	0/0:60,0:59:99:0,102,1762	0/0:16,0:16:44.87:0,45,508	0/0:10,0:10:18.01:0,18,310	0/0:49,0:46:85.43:0,85,1456	0/0:23,0:23:49.73:0,50,512	0/0:20,0:20:15.43:0,15,464	0/0:11,0:11:14.57:0,15,274	0/1:10,0:10:59.94:60,0,135
chr10	93206104	.	A	AG	241.15	PASS	AB=0.917;AC=9;AF=0.205;AN=44;BaseQRankSum=-0.546;DP=329;FS=2.700;HRun=1;HaplotypeScore=42.4472;InbreedingCoeff=-0.1095;MQ=21.51;MQ0=78;MQRankSum=-2.510;QD=2.74;ReadPosRankSum=0.676;VQSLOD=-0.5433;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:8:3.41:0,3,20	./.	./.	0/0:42,0:1:3.01:0,3,32	0/0:5,5:7:2.22:0,2,7	0/0:19,0:11:5.41:0,5,173	0/0:19,0:11:10.80:0,11,94	0/0:35,0:13:20.42:0,20,199	0/0:6,0:3:5.56:0,6,78	0/1:10,1:9:43.33:63,0,43	0/0:8,0:6:6.02:0,6,70	./.	./.	0/0:7,0:5:5.78:0,6,38	0/1:3,0:2:0:0,0,0	0/1:5,0:4:3.98:4,0,75	0/0:6,0:3:6.01:0,6,62	0/0:7,0:4:3.01:0,3,40	0/1:12,2:5:33.94:42,0,34	0/0:5,0:2:2.97:0,3,20	0/1:19,0:10:29.43:29,0,71	0/0:10,0:4:2.97:0,3,20	1/1:6,0:3:1.63:6,2,0	./.	0/0:10,0:2:4.83:0,5,45	0/1:17,2:14:40.79:41,0,166	0/1:5,4:8:8:164,0,8	./.
chr10	93206127	.	G	GGA	610.73	PASS	AB=0.907;AC=21;AF=0.420;AN=50;BaseQRankSum=-1.188;DP=483;FS=9.192;HRun=0;HaplotypeScore=45.4544;InbreedingCoeff=-0.1255;MQ=18.77;MQ0=132;MQRankSum=1.323;QD=2.51;ReadPosRankSum=1.094;VQSLOD=0.2399;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:7:1.72:0,2,8	./.	0/0:41,0:1:3.01:0,3,36	0/0:91,0:4:2.95:0,3,38	0/0:6,0:3:2.97:0,3,20	0/0:24,0:15:1.64:0,2,71	0/0:15,0:9:2.96:0,3,19	0/1:48,1:15:55.19:55,0,61	0/1:6,2:4:20.87:89,0,21	0/1:20,1:12:38.43:38,0,110	0/1:9,1:6:31.41:44,0,31	./.	0/0:6,0:4:2.96:0,3,20	0/1:6,0:3:6.49:26,0,6	1/1:10,0:4:3.01:38,3,0	1/1:4,1:3:6.02:87,6,0	0/0:9,0:3:2.84:0,3,38	0/1:4,2:5:29.86:44,0,30	0/1:18,1:5:29.48:44,0,29	1/1:11,3:8:5.97:69,6,0	1/1:18,8:14:7.13:69,7,0	0/0:6,0:5:5.68:0,6,28	1/1:7,0:2:1.25:3,1,0	0/1:15,0:9:4.21:9,0,4	0/1:8,0:4:1.37:1,0,9	0/1:20,3:18:51.92:120,0,52	0/1:9,0:7:5.33:10,0,5	./.
chr10	93206144	.	AGAG	A	84.26	PASS	AB=0.944;AC=11;AF=0.220;AN=50;BaseQRankSum=1.812;DP=495;FS=1.426;HRun=0;HaplotypeScore=40.1432;InbreedingCoeff=0.2221;MQ=18.11;MQ0=137;MQRankSum=-1.570;QD=0.89;ReadPosRankSum=-2.504;VQSLOD=0.6670;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:7:5.05:41,5,0	./.	0/0:45,0:1:3.01:0,3,51	0/0:87,0:3:3.48:0,3,69	0/0:9,0:4:3.01:0,3,60	0/1:20,0:13:8.28:8,0,103	./.	0/0:65,0:23:38.77:0,39,728	0/0:6,1:4:12.04:0,12,196	0/0:22,0:9:17.79:0,18,282	0/0:8,0:4:6.02:0,6,120	0/1:4,1:1:0:0,0,0	1/1:5,1:4:3.01:50,3,0	0/0:7,0:2:2.98:0,3,23	1/1:11,0:3:1.21:5,1,0	0/0:7,0:3:9.03:0,9,157	0/0:10,0:3:2.84:0,3,54	0/0:8,0:5:6.02:0,6,129	0/0:19,0:4:6.02:0,6,128	0/0:15,0:9:6.02:0,6,107	0/0:25,0:13:2.19:0,2,100	0/0:8,0:4:6.02:0,6,101	0/0:5,0:2:3:0,3,30	0/0:16,0:8:3.48:0,3,47	0/0:11,1:4:2.73:0,3,45	0/1:23,0:14:26.43:26,0,258	1/1:5,1:4:3.16:70,3,0	./.
chr10	93206266	.	G	GGA	968.15	PASS	AB=0.863;AC=22;AF=0.550;AN=40;BaseQRankSum=-1.050;DP=495;FS=13.286;HRun=0;HaplotypeScore=35.7587;InbreedingCoeff=-0.0096;MQ=16.35;MQ0=94;MQRankSum=3.069;QD=3.50;ReadPosRankSum=0.425;VQSLOD=-0.0068;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,7:10:19.57:180,0,20	1/1:1,3:1:3.01:51,3,0	0/1:98,0:8:1.48:1,0,72	0/0:134,0:6:16.62:0,17,161	0/1:5,1:4:13.90:45,0,14	0/1:5,4:8:20.93:46,0,21	1/1:11,1:9:1.97:49,2,0	0/1:54,0:20:15.80:16,0,68	./.	0/1:8,1:4:42.35:42,0,55	./.	./.	1/1:7,2:3:4.26:54,4,0	./.	0/0:5,0:1:0:0,0,0	./.	./.	0/0:5,0:3:5.92:0,6,43	./.	0/1:8,0:5:0:0,0,0	1/1:3,2:4:3.01:49,3,0	0/0:10,0:7:1.87:0,2,10	1/1:9,1:6:7.26:85,7,0	0/0:14,8:15:0.40:0,0,4	1/1:7,5:7:13.29:207,13,0	0/1:9,4:13:11.90:209,0,12	./.	1/1:6,1:5:3.01:51,3,0
chr10	93206309	.	G	GGA	126.85	PASS	AB=0.957;AC=19;AF=0.432;AN=44;BaseQRankSum=1.644;DP=496;FS=8.499;HRun=0;HaplotypeScore=39.7043;InbreedingCoeff=0.1887;MQ=16.32;MQ0=130;MQRankSum=-0.409;QD=0.67;ReadPosRankSum=-2.775;VQSLOD=-0.5242;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:21,3:17:37.88:115,0,38	0/0:6,1:3:2.77:0,3,23	0/0:58,0:2:6.01:0,6,68	0/0:112,0:5:8.06:0,8,81	./.	1/1:12,0:6:2.92:18,3,0	0/1:12,0:10:3.08:6,0,3	0/1:71,0:24:12.53:13,0,192	1/1:4,0:2:0.47:1,0,0	0/0:23,0:7:12.54:0,13,131	./.	1/1:7,0:4:2.90:16,3,0	./.	1/1:5,0:4:0.47:1,0,0	0/0:12,0:4:0:0,0,0	0/0:3,0:2:3:0,3,27	./.	1/1:6,0:3:1.77:4,2,0	./.	./.	1/1:12,0:8:2.90:16,3,0	0/0:9,0:5:8.99:0,9,91	0/1:9,0:1:0:0,0,0	0/0:16,0:9:1.48:0,1,12	0/0:13,0:6:3.74:0,4,31	0/1:18,1:14:32.57:33,0,101	1/1:4,0:1:2.97:20,3,0	0/0:7,0:4:3.90:0,4,39
chr10	93206346	.	G	GA	85.71	PASS	AB=0.919;AC=8;AF=0.333;AN=24;BaseQRankSum=1.719;DP=151;FS=0.000;HRun=0;HaplotypeScore=28.3708;InbreedingCoeff=0.1019;MQ=17.13;MQ0=48;MQRankSum=0.495;QD=2.04;ReadPosRankSum=2.476;VQSLOD=1.3293;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,2:9:2.87:3,0,33	0/0:2,0:1:2.97:0,3,20	./.	./.	./.	0/1:3,0:2:0:0,0,0	0/0:6,1:6:0.47:0,0,1	0/0:18,0:6:11:0,11,41	./.	0/1:8,1:7:27.95:28,0,46	./.	./.	0/0:5,1:1:0.47:0,0,1	./.	./.	0/0:1,0:1:2.97:0,3,20	./.	1/1:1,1:2:5.88:56,6,0	./.	./.	./.	./.	./.	./.	1/1:2,2:3:2.91:47,3,0	0/1:8,1:7:31.14:41,0,31	./.	0/0:2,0:2:2.96:0,3,19
chr10	93207089	.	G	GGA	504.66	PASS	AB=0.974;AC=21;AF=0.477;AN=44;BaseQRankSum=1.146;DP=289;FS=2.381;HRun=0;HaplotypeScore=63.1896;InbreedingCoeff=0.1306;MQ=23.06;MQ0=34;MQRankSum=-0.285;QD=2.46;ReadPosRankSum=0.218;VQSLOD=1.4268;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:12:13.05:67,13,0	1/1:10,1:7:12.24:125,12,0	./.	./.	0/1:8,0:7:1.10:3,0,1	0/1:15,1:13:37.39:37,0,54	./.	0/0:17,0:6:14.98:0,15,174	0/0:5,0:5:0.12:0,0,22	0/1:18,0:8:45.10:45,0,62	0/0:12,1:11:0.32:0,0,1	1/1:5,0:5:4.61:17,5,0	./.	./.	0/1:6,0:5:11.05:34,0,11	1/1:8,0:6:2.97:34,3,0	0/0:7,0:4:5.37:0,5,49	0/0:2,0:2:2.98:0,3,22	0/1:14,0:10:13.90:14,0,42	0/0:14,0:12:0.47:0,0,1	0/1:8,0:5:0.02:1,0,0	1/1:14,1:15:7.50:77,7,0	0/1:9,1:8:0:0,0,0	./.	0/1:27,1:20:2.02:2,0,29	0/1:19,0:13:10.29:10,0,141	0/0:4,0:3:2.52:0,3,38	1/1:14,2:13:14.64:166,15,0
chr10	93207107	.	GGA	G	1432.23	PASS	AB=0.792;AC=23;AF=0.442;AN=52;BaseQRankSum=0.768;DP=456;FS=45.026;HRun=0;HaplotypeScore=74.7238;InbreedingCoeff=0.0697;MQ=21.72;MQ0=92;MQRankSum=-2.967;QD=4.31;ReadPosRankSum=2.446;VQSLOD=0.5437;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,6:16:28.23:163,0,28	1/1:14,4:10:15.68:111,16,0	0/0:10,0:2:5.61:0,6,57	./.	0/0:13,5:11:1.82:0,2,6	1/1:17,4:17:3.39:125,3,0	0/1:13,1:11:9.23:11,0,9	0/1:30,2:13:1.50:1,0,256	1/1:7,3:10:8.97:87,9,0	1/1:26,8:19:17.46:300,17,0	1/1:13,8:17:2.50:7,2,0	0/0:8,1:8:3:0,3,35	1/1:5,1:2:2.97:20,3,0	./.	0/1:4,5:7:25.20:25,0,41	0/0:11,2:7:9.02:0,9,116	0/0:10,1:5:0.61:0,1,47	0/0:4,0:3:3.01:0,3,33	1/1:17,2:12:17.99:187,18,0	0/1:19,5:19:4.62:30,0,5	0/0:12,1:8:6.01:0,6,72	0/1:11,5:15:13.79:82,0,14	0/0:13,1:11:0:0,0,0	0/0:10,0:5:3.01:0,3,35	0/1:25,8:26:58.12:74,0,58	0/1:19,8:16:23.15:246,0,23	0/0:6,0:3:0.47:0,0,1	0/1:11,2:8:7.33:108,0,7
chr10	93207672	.	A	ATCCCTCTCTCTC	8421.10	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-1.486;DP=624;FS=18.483;HRun=0;HaplotypeScore=222.3436;InbreedingCoeff=0.4439;MQ=68.75;MQ0=7;MQRankSum=-4.841;QD=15.20;ReadPosRankSum=0.145;VQSLOD=2.1604;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:37.71:338,38,0	1/1:10,0:10:21.47:381,21,0	0/0:20,0:15:29.43:0,29,330	0/0:50,0:32:89.38:0,89,801	1/1:24,0:24:25.23:159,25,0	1/1:10,11:20:3.01:131,3,0	1/1:28,0:25:27.85:368,28,0	1/1:34,0:34:93.21:800,93,0	0/1:20,0:20:66.19:272,0,66	1/1:23,0:23:11.29:295,11,0	1/1:14,0:14:29.92:250,30,0	1/1:15,0:15:27.34:232,27,0	1/1:14,0:12:24.44:227,24,0	1/1:16,0:16:38.79:303,39,0	1/1:16,0:17:35.65:445,36,0	1/1:23,0:23:38.09:277,38,0	1/1:21,0:23:58.35:698,58,0	1/1:16,0:16:16.80:239,17,0	0/1:18,0:17:3.61:337,0,4	1/1:22,0:21:35.72:264,36,0	1/1:27,0:27:5.73:88,6,0	1/1:32,0:32:53.58:457,54,0	1/1:23,0:22:32.82:264,33,0	1/1:26,0:24:39.44:355,39,0	1/1:30,0:30:53.97:469,54,0	0/1:21,0:21:99:321,0,113	1/1:15,0:15:2.43:16,2,0	1/1:18,0:18:48.22:439,48,0
chr10	93207673	.	T	TCC	9066.25	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-0.814;DP=650;FS=2.919;HRun=1;HaplotypeScore=140.8418;InbreedingCoeff=0.7498;MQ=67.42;MQ0=9;MQRankSum=-1.840;QD=15.63;ReadPosRankSum=3.579;VQSLOD=2.4193;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:23:39.34:298,39,0	1/1:8,1:9:18.98:143,19,0	0/0:20,0:15:28.89:0,29,329	0/0:50,0:32:89.34:0,89,800	1/1:4,20:24:26.52:200,27,0	0/1:20,0:18:3.43:40,0,3	1/1:28,0:25:28.33:368,28,0	1/1:37,0:37:87.50:741,88,0	1/1:21,0:21:47.78:564,48,0	1/1:26,0:26:30.19:495,30,0	1/1:13,1:14:29.92:250,30,0	1/1:16,0:16:26.96:231,27,0	1/1:15,0:13:23.94:226,24,0	1/1:17,0:17:38.79:303,39,0	1/1:19,0:19:36.47:340,36,0	1/1:22,3:25:47.18:548,47,0	1/1:23,0:23:58.44:678,58,0	1/1:13,2:15:38.72:363,39,0	1/1:16,5:20:50.11:519,50,0	1/1:23,0:22:35.10:287,35,0	1/1:7,20:28:9.03:148,9,0	1/1:34,0:34:53.58:456,54,0	1/1:27,0:26:32.82:264,33,0	1/1:26,0:24:38.97:354,39,0	1/1:30,0:29:53.97:469,54,0	1/1:14,8:22:46.57:488,47,0	1/1:4,10:16:2.43:15,2,0	1/1:19,0:18:32.55:281,33,0
chr10	93207714	.	CTGTGTGTGTGTGTGTG	C	3185.16	PASS	AB=0.738;AC=17;AF=0.315;AN=54;BaseQRankSum=5.569;DP=526;FS=18.617;HRun=0;HaplotypeScore=214.2000;InbreedingCoeff=0.6435;MQ=43.24;MQ0=20;MQRankSum=-7.104;QD=21.38;ReadPosRankSum=-3.251;VQSLOD=0.9793;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:22:29.90:990,30,0	0/1:6,0:8:99:187,0,148	0/0:8,0:2:6.02:0,6,234	0/0:9,0:2:6.01:0,6,222	0/0:21,0:20:24.94:0,25,1828	0/0:15,0:16:29.95:0,30,1463	0/0:29,0:25:37.07:0,37,2191	0/1:17,0:22:13.20:13,0,789	0/0:29,0:29:54.66:0,55,3284	0/0:26,0:26:63.21:0,63,3464	0/0:14,0:14:21.07:0,21,1405	1/1:6,6:12:5.36:142,5,0	1/1:4,5:8:15.05:650,15,0	1/1:4,7:11:3.01:131,3,0	1/1:9,0:14:27.09:915,27,0	0/0:26,0:26:34:0,34,2061	0/0:13,0:26:24.08:0,24,933	0/0:8,0:12:21.07:0,21,1284	0/0:19,0:18:41.79:0,42,1779	0/0:28,0:27:38.81:0,39,2456	0/0:36,0:34:45.15:0,45,3244	0/1:9,8:19:0:0,0,0	0/0:8,12:19:0.47:0,0,1	1/1:10,4:12:0.47:1,0,0	./.	0/0:19,0:19:32.70:0,33,1738	0/0:21,0:21:36.59:0,37,2026	1/1:8,3:10:8.80:324,9,0
chr10	93208738	.	CGTGT	C	4234.37	PASS	AB=0.628;AC=23;AF=0.442;AN=52;BaseQRankSum=-1.024;DP=584;FS=0.622;HRun=0;HaplotypeScore=128.1128;InbreedingCoeff=0.7132;MQ=57.13;MQ0=10;MQRankSum=3.562;QD=15.34;ReadPosRankSum=3.307;VQSLOD=4.3218;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:18.01:0,18,279	0/0:6,0:6:3.01:0,3,67	./.	0/0:29,0:13:9.03:0,9,168	1/1:7,5:15:16.86:215,17,0	0/0:6,0:13:2.70:0,3,52	0/0:17,0:28:24.08:0,24,423	0/0:28,0:28:45.58:0,46,781	1/1:1,9:10:17.12:330,17,0	1/1:18,12:31:34.35:501,34,0	1/1:6,9:16:15.04:208,15,0	0/0:14,0:14:2.99:0,3,43	0/0:17,0:16:8.39:0,8,118	1/1:23,0:23:1.32:3,1,0	0/0:16,0:28:15.24:0,15,228	1/1:5,4:12:14.87:220,15,0	0/0:13,0:19:11.99:0,12,158	0/1:11,13:25:51.22:511,0,51	1/1:10,10:19:26.88:370,27,0	1/1:9,19:28:48.16:731,48,0	1/1:14,16:28:14.88:240,15,0	0/0:18,0:17:5.36:0,5,102	0/0:13,0:12:2.02:0,2,10	0/0:19,0:19:5.74:0,6,113	0/0:12,0:22:12.02:0,12,197	1/1:12,14:29:50.32:668,50,0	1/1:19,13:33:14.29:239,14,0	./.
chr10	93209306	.	ACTT	A	2347.04	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.762;DP=695;FS=14.179;HRun=0;HaplotypeScore=102.4347;InbreedingCoeff=0.9993;MQ=83.07;MQ0=0;MQRankSum=-2.039;QD=43.46;ReadPosRankSum=0.807;VQSLOD=4.7621;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,2811	0/0:9,0:9:27.09:0,27,610	0/0:20,0:20:57.17:0,57,1198	0/0:20,0:20:46.71:0,47,1030	0/0:27,0:27:75.26:0,75,1697	1/1:0,26:26:72.20:1169,72,0	1/1:0,28:28:78.27:1299,78,0	0/0:29,0:29:72.25:0,72,1620	0/0:22,0:22:60.21:0,60,1360	0/0:28,0:28:81.27:0,81,1759	0/0:18,0:18:54.19:0,54,1199	0/0:25,0:25:72.25:0,72,1607	0/0:19,0:19:51.16:0,51,1109	0/0:18,0:18:54.19:0,54,1224	0/0:23,0:22:66.23:0,66,1462	0/0:22,0:22:60.19:0,60,1293	0/0:37,0:37:99:0,111,2496	0/0:34,0:34:99:0,99,2214	0/0:24,0:24:72.25:0,72,1620	0/0:26,0:26:78.27:0,78,1768	0/0:40,0:40:99:0,114,2528	0/0:22,0:22:66.23:0,66,1476	0/0:23,0:23:69.24:0,69,1564	0/0:33,0:33:90.31:0,90,2016	0/0:18,0:18:54.18:0,54,1179	0/0:23,0:23:66.23:0,66,1456	0/0:26,0:25:78.27:0,78,1764	0/0:11,0:11:33.11:0,33,716
chr10	93210844	.	G	GT	9288.50	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-13.974;DP=570;FS=7.553;HRun=7;HaplotypeScore=50.1324;InbreedingCoeff=0.9992;MQ=73.83;MQ0=0;MQRankSum=-3.626;QD=29.12;ReadPosRankSum=0.105;VQSLOD=5.1962;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1158	0/0:8,0:8:21.03:0,21,203	0/0:18,0:19:33.09:0,33,303	0/0:13,0:13:32.17:0,32,297	1/1:1,20:21:57.17:688,57,0	1/1:3,21:24:54.17:652,54,0	1/1:3,17:20:51.15:611,51,0	1/1:15,18:33:50.42:752,50,0	1/1:2,25:27:44.26:772,44,0	1/1:3,20:23:60.18:724,60,0	1/1:1,13:14:36.11:432,36,0	0/0:20,0:20:57.08:0,57,546	0/0:13,0:13:39.06:0,39,377	0/0:10,0:10:30.05:0,30,290	0/0:19,0:19:57.09:0,57,550	1/1:0,20:20:57.17:689,57,0	1/1:4,17:21:42.13:507,42,0	1/1:2,20:22:48.15:580,48,0	1/1:1,18:19:54.15:639,54,0	1/1:4,13:17:39.12:464,39,0	1/1:1,17:18:45.14:544,45,0	0/0:22,0:22:66.09:0,66,633	0/0:24,0:24:60.09:0,60,579	0/0:21,0:21:60.10:0,60,579	0/0:28,0:27:72.09:0,72,688	1/1:1,21:22:66.20:797,66,0	1/1:4,14:18:36.11:435,36,0	0/0:13,0:13:39.03:0,39,369
chr10	93213210	.	A	ACT	20735.60	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-12.214;DP=696;FS=1.725;HRun=0;HaplotypeScore=80.2250;InbreedingCoeff=0.9988;MQ=83.47;MQ0=4;MQRankSum=-2.845;QD=44.21;ReadPosRankSum=2.488;VQSLOD=6.5423;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:47:99:1377,114,0	1/1:0,0:7:18.06:231,18,0	0/0:23,0:23:49.32:0,49,642	0/0:31,0:31:66.57:0,67,987	1/1:0,18:17:42.14:766,42,0	1/1:2,22:24:51.17:955,51,0	1/1:3,30:34:84.29:1573,84,0	1/1:2,25:27:69.21:1293,69,0	1/1:0,27:27:75.26:1395,75,0	1/1:1,20:21:60.21:1087,60,0	1/1:0,19:19:54.19:1010,54,0	0/0:25,0:25:75.24:0,75,1083	0/0:17,0:17:51.15:0,51,727	0/0:23,0:23:69.23:0,69,1015	1/1:0,0:24:63.18:775,63,0	1/1:1,26:28:75.26:1405,75,0	1/1:2,33:35:84.29:1573,84,0	1/1:1,25:26:63.22:1180,63,0	1/1:8,18:26:67.30:1219,67,0	1/1:0,18:19:51.17:898,51,0	1/1:1,45:48:99:2191,117,0	0/0:15,0:15:42.14:0,42,619	0/0:21,0:21:60.17:0,60,826	0/0:29,0:29:87.29:0,87,1277	0/0:22,0:22:63.21:0,63,925	1/1:1,21:22:63.20:1132,63,0	1/1:0,13:14:36.12:674,36,0	0/0:21,0:21:63.21:0,63,922
chr10	93213948	.	CACCA	C	11120.62	PASS	AB=0.996;AC=33;AF=0.589;AN=56;BaseQRankSum=-8.691;DP=662;FS=1.381;HRun=0;HaplotypeScore=190.4101;InbreedingCoeff=0.1874;MQ=68.46;MQ0=0;MQRankSum=-6.388;QD=22.79;ReadPosRankSum=-4.917;VQSLOD=3.9381;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:41:99:311,0,423	0/1:8,0:8:22.93:23,0,68	0/0:33,0:25:75.23:0,75,1624	0/0:23,0:21:63.22:0,63,1328	1/1:0,21:21:32.38:498,32,0	0/0:19,0:19:57.18:0,57,1342	0/0:28,0:28:81.28:0,81,1919	0/1:18,0:18:99:338,0,280	1/1:0,16:16:33.11:688,33,0	1/1:0,37:37:99:1915,105,0	1/1:1,18:19:23.80:457,24,0	0/1:30,0:30:99:165,0,357	0/1:28,0:28:99:180,0,291	0/1:17,0:17:39.11:39,0,230	0/1:26,0:26:99:180,0,298	1/1:0,19:19:39.13:814,39,0	0/0:31,0:31:72.14:0,72,915	1/1:0,17:17:21.07:439,21,0	1/1:1,18:19:57.07:824,57,0	1/1:0,18:18:32.99:561,33,0	1/1:0,35:35:21.03:353,21,0	0/1:20,1:21:99:418,0,151	0/1:24,0:24:99:270,0,226	0/0:40,0:40:31.08:0,31,613	0/1:16,0:16:85.05:85,0,152	1/1:0,20:20:54.16:961,54,0	1/1:0,28:28:72.24:1473,72,0	0/1:10,0:10:83.43:127,0,83
chr10	93213951	.	CA	C	14412.65	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=7.357;DP=658;FS=0.868;HRun=1;HaplotypeScore=145.5952;InbreedingCoeff=0.9865;MQ=70.07;MQ0=0;MQRankSum=-5.964;QD=25.83;ReadPosRankSum=5.807;VQSLOD=4.6926;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,43:43:99:1466,105,0	1/1:0,8:8:21.07:293,21,0	0/0:30,1:26:75.70:0,76,1119	0/0:22,0:21:63.19:0,63,913	1/1:21,0:21:32.22:242,32,0	0/0:18,0:18:54.16:0,54,797	0/0:29,0:29:84.27:0,84,1294	1/1:22,0:22:24.02:578,24,0	1/1:16,0:16:32.63:219,33,0	1/1:37,0:37:99:980,104,0	1/1:19,0:19:23.56:201,24,0	1/1:0,30:30:83.79:1170,84,0	1/1:0,27:27:68.52:958,69,0	1/1:0,15:15:42.14:586,42,0	1/1:0,25:25:69.23:964,69,0	1/1:19,0:19:38.56:259,39,0	1/1:29,1:30:12.44:57,12,0	1/1:17,0:17:20.77:140,21,0	1/1:19,0:19:56.83:594,57,0	1/1:18,0:18:32.90:348,33,0	1/1:35,0:35:19.22:179,19,0	1/1:1,19:20:57.15:770,57,0	1/1:0,22:22:63.21:879,63,0	1/1:0,40:40:99:1586,114,0	1/1:0,17:17:42.14:586,42,0	1/1:20,0:20:53.69:491,54,0	1/1:28,0:28:68.24:458,68,0	1/1:0,10:10:30.10:408,30,0
chr10	93213952	.	A	ACC	6934.71	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-7.218;DP=661;FS=8.314;HRun=2;HaplotypeScore=185.7832;InbreedingCoeff=0.7776;MQ=70.61;MQ0=0;MQRankSum=5.134;QD=14.33;ReadPosRankSum=-5.077;VQSLOD=-0.2389;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:43,0:43:24.20:412,24,0	1/1:8,0:8:8.03:125,8,0	0/0:31,0:27:74.53:0,75,1085	0/0:20,0:19:57.18:0,57,865	1/1:21,0:21:10.97:117,11,0	0/0:18,0:18:51.16:0,51,773	0/0:28,0:28:84.27:0,84,1307	1/1:0,21:22:63.10:966,63,0	0/0:16,0:16:5.18:0,5,11	1/1:38,0:38:26.46:538,26,0	1/1:19,0:19:2.31:76,2,0	1/1:31,0:31:18.39:328,18,0	1/1:27,0:27:20.16:326,20,0	1/1:15,0:15:3.22:80,3,0	1/1:25,0:25:16.08:252,16,0	0/0:19,0:19:6.13:0,6,13	1/1:1,27:29:66.23:1320,66,0	0/0:17,0:17:3.30:0,3,7	1/1:19,0:19:38.86:487,39,0	1/1:20,0:20:15.06:244,15,0	1/1:36,0:36:6.47:97,6,0	1/1:21,0:21:27.41:412,27,0	1/1:22,0:22:27.69:416,28,0	1/1:40,0:40:0.28:116,0,0	1/1:17,0:17:13.07:207,13,0	1/1:20,0:20:13.02:260,13,0	0/0:28,0:28:10.74:0,11,24	1/1:11,0:11:10.50:155,11,0
chr10	93215685	.	TA	T	18725.30	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.087;DP=664;FS=6.533;HRun=5;HaplotypeScore=81.3662;InbreedingCoeff=0.9891;MQ=87.63;MQ0=0;MQRankSum=-9.480;QD=30.40;ReadPosRankSum=5.603;VQSLOD=5.0887;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,35:39:96.27:1089,96,0	1/1:1,11:12:27.08:306,27,0	0/0:28,0:28:61.80:0,62,832	0/0:20,0:20:34.40:0,34,526	1/1:1,28:29:78.22:885,78,0	1/1:0,17:17:51.15:579,51,0	1/1:2,25:27:66.19:749,66,0	1/1:5,35:40:99:1180,105,0	1/1:1,19:20:54.15:613,54,0	1/1:1,26:27:75.21:848,75,0	1/1:0,15:15:45.13:510,45,0	1/1:1,21:22:63.18:714,63,0	1/1:0,22:22:63.18:715,63,0	1/1:1,29:30:84.24:952,84,0	1/1:2,20:22:60.17:681,60,0	1/1:0,8:8:21.06:238,21,0	1/1:0,26:26:72.21:817,72,0	1/1:0,14:14:36.10:408,36,0	1/1:3,23:26:69.18:774,69,0	1/1:0,24:24:72.21:816,72,0	1/1:3,33:36:93.26:1055,93,0	1/1:3,28:31:81.23:919,81,0	1/1:3,21:24:60.17:681,60,0	1/1:2,29:31:84.24:953,84,0	1/1:3,25:28:66.19:749,66,0	1/1:1,19:20:57.16:646,57,0	1/1:1,20:21:60.17:680,60,0	1/1:0,5:5:15.04:170,15,0
chr10	93218345	.	TGG	T	5130.41	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-6.038;DP=535;FS=2.203;HRun=9;HaplotypeScore=93.7617;InbreedingCoeff=0.9863;MQ=74.85;MQ0=1;MQRankSum=-4.542;QD=27.88;ReadPosRankSum=2.700;VQSLOD=5.0853;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:21:39.07:0,39,412	0/0:4,0:6:9.01:0,9,85	0/0:22,0:21:54.14:0,54,772	0/0:15,0:14:32.80:0,33,388	0/0:10,0:19:30.04:0,30,304	0/0:4,0:14:27.05:0,27,271	0/0:7,0:18:39.08:0,39,432	1/1:6,21:27:63.13:701,63,0	0/0:5,0:12:24.05:0,24,260	0/0:6,0:17:45.09:0,45,499	0/0:6,0:12:18.02:0,18,170	1/1:4,21:25:51.13:594,51,0	1/1:1,16:17:45.13:524,45,0	1/1:1,15:16:39.11:454,39,0	0/0:2,0:21:57.09:0,57,555	0/0:19,0:20:51.17:0,51,817	0/0:6,0:27:57.10:0,57,586	0/0:7,0:15:33.07:0,33,365	0/0:4,0:16:42.07:0,42,433	0/0:1,0:7:17.98:0,18,164	0/0:14,0:46:96.18:0,96,1034	1/1:1,21:22:57.17:664,57,0	1/1:4,11:15:36.10:417,36,0	1/1:4,34:37:90.25:1041,90,0	1/1:0,16:16:45.13:524,45,0	0/0:10,0:24:54.11:0,54,601	0/0:5,0:19:30.06:0,30,341	1/1:0,8:8:18.05:210,18,0
chr10	93218559	.	CTGGTTCCAGTGCA	C	11249.51	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.336;DP=563;FS=4.363;HRun=0;HaplotypeScore=230.6031;InbreedingCoeff=0.9921;MQ=80.91;MQ0=0;MQRankSum=-13.919;QD=82.11;ReadPosRankSum=1.758;VQSLOD=4.6835;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,141,8700	0/0:8,0:8:24.08:0,24,1447	0/0:21,0:21:59.87:0,60,2585	0/0:21,0:21:59.86:0,60,2730	0/0:30,0:30:81.75:0,82,4831	0/0:29,0:29:84.29:0,84,5015	0/0:20,0:20:60.21:0,60,3653	1/1:5,11:16:36.11:1375,36,0	0/0:26,0:26:78.27:0,78,4980	0/0:26,0:26:72.25:0,72,4573	0/0:15,0:15:45.15:0,45,2748	1/1:2,9:12:30.10:1227,30,0	1/1:3,13:16:39.13:1524,39,0	1/1:5,12:17:42.14:1632,42,0	0/0:15,0:15:45.15:0,45,2859	0/0:15,0:15:45.15:0,45,2989	0/0:23,0:23:69.24:0,69,4473	0/0:14,0:14:39.13:0,39,2401	0/0:19,0:19:57.18:0,57,3282	0/0:15,0:15:45.14:0,45,2574	0/0:36,0:36:99:0,108,6521	1/1:4,16:19:30.10:1176,30,0	1/1:3,9:12:18.06:736,18,0	1/1:2,9:11:18.06:707,18,0	1/1:5,23:28:63.22:2578,63,0	0/0:26,0:26:78.27:0,78,4796	0/0:17,0:17:48.16:0,48,2942	1/1:3,2:5:12.01:294,12,0
chr10	93218590	.	GC	G	4145.95	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.973;DP=571;FS=2.216;HRun=4;HaplotypeScore=116.8474;InbreedingCoeff=0.9857;MQ=65.94;MQ0=0;MQRankSum=-9.786;QD=25.75;ReadPosRankSum=-2.672;VQSLOD=1.7561;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,132,1826	0/0:4,0:4:12.04:0,12,168	0/0:16,0:16:42.44:0,42,613	0/0:18,0:18:48.15:0,48,640	0/0:23,0:23:60.20:0,60,837	0/0:22,0:22:60.20:0,60,839	0/0:18,0:18:51.15:0,51,695	1/1:2,20:22:60.17:707,60,0	0/0:27,0:27:72.24:0,72,1007	0/0:26,0:26:75.25:0,75,1034	0/0:18,0:18:50.99:0,51,694	1/1:0,17:17:45.10:522,45,0	1/1:3,15:18:36.11:430,36,0	1/1:2,16:18:39.12:466,39,0	0/0:19,0:19:51.17:0,51,714	0/0:15,0:15:42.13:0,42,570	0/0:21,0:21:63.21:0,63,879	0/0:16,0:16:45.12:0,45,609	0/0:25,0:25:69.18:0,69,912	0/0:12,0:12:36.12:0,36,501	0/0:35,0:35:99:0,102,1409	1/1:2,15:16:26.91:300,27,0	1/1:1,12:13:30.09:359,30,0	1/1:1,22:23:41.65:499,42,0	1/1:1,29:30:66.12:754,66,0	0/0:29,0:29:87.28:0,87,1201	0/0:15,0:15:42.12:0,42,568	1/1:1,2:3:9.03:108,9,0
chr10	93218828	.	C	CCCAGT	2481.64	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.311;DP=731;FS=3.566;HRun=0;HaplotypeScore=134.9591;InbreedingCoeff=0.9442;MQ=58.89;MQ0=7;MQRankSum=1.594;QD=72.99;ReadPosRankSum=4.212;VQSLOD=5.5528;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,3056	0/0:9,0:9:27.08:0,27,560	0/0:31,0:17:46.97:0,47,907	0/0:36,0:28:75.25:0,75,1519	0/0:23,0:23:66.21:0,66,1393	0/0:28,0:28:81.26:0,81,1720	0/0:42,0:42:99:0,108,2331	0/0:34,0:33:81.25:0,81,1633	0/0:19,0:19:57.20:0,57,1254	0/0:38,0:38:99:0,111,2446	0/0:18,0:18:51.17:0,51,1101	0/0:25,0:25:72.25:0,72,1583	0/0:22,0:22:66.21:0,66,1406	0/0:29,0:29:87.30:0,87,1933	0/0:15,0:15:42.14:0,42,936	0/0:12,0:12:36.12:0,36,803	1/1:4,30:33:81.28:2576,81,0	0/0:19,0:19:51.17:0,51,1130	0/0:23,0:19:57.20:0,57,1264	0/0:23,0:23:63.20:0,63,1348	0/0:51,0:51:99:0,154,3222	0/0:14,0:14:42.11:0,42,850	0/0:23,0:23:63.20:0,63,1318	0/0:31,0:31:90.28:0,90,1884	0/0:24,0:24:66.18:0,66,1418	0/0:33,0:33:90.29:0,90,1875	0/0:24,0:24:72.25:0,72,1577	0/0:3,0:3:9.03:0,9,201
chr10	93219314	.	T	TA	24879.33	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-13.816;DP=756;FS=0.772;HRun=2;HaplotypeScore=66.0131;InbreedingCoeff=1.0000;MQ=90.82;MQ0=0;MQRankSum=-7.641;QD=39.12;ReadPosRankSum=5.685;VQSLOD=4.8769;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,43:43:99:1815,126,0	1/1:0,16:16:48.16:691,48,0	0/0:38,0:38:99:0,108,1307	0/0:22,0:22:58.41:0,58,682	1/1:4,23:26:57.15:798,57,0	0/0:24,0:24:69.20:0,69,842	0/0:36,0:36:99:0,105,1288	1/1:2,27:29:81.27:1166,81,0	1/1:1,23:24:63.21:907,63,0	1/1:3,30:33:90.30:1293,90,0	1/1:0,18:18:51.13:711,51,0	1/1:0,26:26:78.26:1123,78,0	1/1:2,22:24:66.22:950,66,0	1/1:0,18:18:54.18:778,54,0	1/1:1,29:30:84.28:1210,84,0	1/1:1,17:18:48.16:691,48,0	1/1:0,26:26:69.23:994,69,0	1/1:2,16:18:42.14:605,42,0	1/1:2,13:15:42.14:605,42,0	1/1:3,25:28:69.23:994,69,0	1/1:0,42:42:99:1685,117,0	1/1:0,25:25:69.23:994,69,0	1/1:0,26:26:68.99:994,69,0	1/1:1,43:44:99:1685,117,0	1/1:1,25:26:72.24:1037,72,0	1/1:3,25:28:75.20:1039,75,0	1/1:3,28:30:84.28:1210,84,0	1/1:0,21:21:63.21:907,63,0
chr10	93219929	.	AGTTTCT	A	439.56	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.065;DP=672;FS=1.334;HRun=0;HaplotypeScore=145.6547;InbreedingCoeff=0.9968;MQ=69.43;MQ0=0;MQRankSum=-4.681;QD=21.98;ReadPosRankSum=0.510;VQSLOD=3.4065;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,169,5856	0/0:11,0:11:30.10:0,30,1069	0/0:18,0:18:48.16:0,48,1509	0/0:19,0:19:51.14:0,51,1508	0/0:27,0:27:66.23:0,66,2286	0/0:20,0:20:54.14:0,54,1624	0/0:31,0:31:90.27:0,90,2947	0/0:29,0:29:87.29:0,87,2927	0/0:20,0:20:60.19:0,60,1995	0/0:26,0:26:75.22:0,75,2371	0/0:13,0:13:36.12:0,36,1284	0/0:24,0:24:72.20:0,72,2429	0/0:15,0:15:42.14:0,42,1439	0/0:25,0:25:75.25:0,75,2496	0/0:26,0:26:78.27:0,78,2740	0/0:17,0:17:51.16:0,51,1700	1/1:0,20:20:24.08:533,24,0	0/0:20,0:20:60.21:0,60,2139	0/0:20,0:20:57.20:0,57,2014	0/0:28,0:28:69.24:0,69,2341	0/0:40,0:40:99:0,117,3987	0/0:31,0:31:90.31:0,90,3179	0/0:28,0:28:72.25:0,72,2510	0/0:27,0:27:81.28:0,81,2852	0/0:22,0:22:51.17:0,51,1716	0/0:24,0:24:72.22:0,72,2319	0/0:23,0:23:66.23:0,66,2313	0/0:10,0:10:30.10:0,30,1066
chr10	93220116	.	C	CCTT	24512.38	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.771;DP=528;FS=3.076;HRun=0;HaplotypeScore=84.3146;InbreedingCoeff=0.9729;MQ=79.65;MQ0=0;MQRankSum=-10.129;QD=50.75;ReadPosRankSum=4.582;VQSLOD=6.9024;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:54.18:1243,54,0	1/1:0,12:12:30.06:642,30,0	0/0:15,0:15:35.30:0,35,638	0/0:30,0:30:75.14:0,75,1197	1/1:2,17:20:21.07:478,21,0	1/1:0,15:15:42.14:968,42,0	1/1:1,15:17:48.16:1104,48,0	1/1:5,30:36:96.30:2050,96,0	1/1:0,20:20:54.19:1245,54,0	1/1:2,10:13:33.09:641,33,0	1/1:2,7:10:15.05:343,15,0	1/1:0,21:21:54.19:1243,54,0	1/1:0,12:12:33.11:760,33,0	1/1:0,14:14:39.13:896,39,0	1/1:4,23:29:60.05:1328,60,0	1/1:2,10:13:30.07:634,30,0	1/1:3,17:21:45.15:1036,45,0	1/1:2,12:14:36.12:829,36,0	1/1:2,12:15:42.14:901,42,0	1/1:0,16:16:36.12:828,36,0	1/1:5,34:39:78.19:1746,78,0	1/1:1,15:18:33.03:706,33,0	1/1:1,15:17:36.07:829,36,0	1/1:3,16:19:42.10:918,42,0	1/1:0,12:12:30.10:689,30,0	1/1:1,19:22:63.16:1349,63,0	1/1:0,16:16:36.12:830,36,0	1/1:0,8:8:12.04:277,12,0
chr10	93220561	.	CTCT	C	81.33	PASS	AC=4;AF=0.200;AN=20;BaseQRankSum=2.054;DP=614;FS=0.000;HRun=0;HaplotypeScore=35.0311;InbreedingCoeff=0.5758;MQ=9.93;MQ0=431;MQRankSum=-1.592;QD=1.89;ReadPosRankSum=-1.027;VQSLOD=1.1010;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:12,0:7:21.07:0,21,514	./.	./.	0/0:24,0:12:12.04:0,12,281	./.	./.	./.	./.	0/0:21,0:4:12.04:0,12,295	0/0:25,0:14:18.06:0,18,441	./.	./.	./.	./.	./.	./.	0/0:28,0:1:3.01:0,3,74	./.	0/0:36,0:20:33.11:0,33,806	./.	1/1:12,6:3:3.01:56,3,0	1/1:11,14:4:6.02:112,6,0	./.	./.	0/0:30,0:1:3.01:0,3,74	./.	0/0:16,0:4:9.03:0,9,206
chr10	93222703	.	TA	T	3634.41	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=5.757;DP=350;FS=6.077;HRun=8;HaplotypeScore=39.4872;InbreedingCoeff=0.9468;MQ=63.54;MQ0=2;MQRankSum=1.940;QD=23.30;ReadPosRankSum=-0.504;VQSLOD=3.4844;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.14:0,69,811	0/0:13,0:13:39.11:0,39,458	0/0:9,0:9:21:0,21,212	0/0:7,0:5:14.85:0,15,129	1/1:1,19:20:50.72:428,51,0	0/0:19,0:19:51.16:0,51,613	0/0:6,0:6:18.02:0,18,191	1/1:2,16:16:45.05:425,45,0	1/1:0,3:3:9.01:87,9,0	1/1:3,14:16:36.02:338,36,0	1/1:0,5:5:15.02:145,15,0	0/0:6,0:7:17.89:0,18,195	0/0:4,0:4:9.03:0,9,108	0/0:7,0:7:21.05:0,21,242	0/0:13,0:13:36.08:0,36,403	1/1:0,5:5:9.01:87,9,0	0/0:26,0:26:48.35:0,48,331	1/1:3,20:23:48.02:453,48,0	1/1:0,17:17:51.08:489,51,0	1/1:2,11:13:32.93:296,33,0	1/1:1,3:4:8.97:77,9,0	0/0:4,0:4:12.04:0,12,144	0/0:5,0:5:9.02:0,9,97	0/0:11,0:11:30.01:0,30,342	0/0:15,0:15:45.14:0,45,542	1/1:0,12:12:36.06:347,36,0	1/1:1,18:19:48.08:463,48,0	0/0:22,0:21:63.19:0,63,758
chr10	93222805	.	T	TGG	297.30	PASS	AB=0.916;AC=7;AF=0.125;AN=56;BaseQRankSum=2.559;DP=403;FS=34.082;HRun=0;HaplotypeScore=75.1661;InbreedingCoeff=0.2075;MQ=47.97;MQ0=38;MQRankSum=-1.469;QD=4.44;ReadPosRankSum=2.203;VQSLOD=0.9704;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:96.22:0,96,1162	0/0:3,0:3:9.03:0,9,120	0/0:13,0:6:17.99:0,18,191	0/1:7,0:3:2.99:3,0,3	0/0:17,0:16:44.97:0,45,518	0/0:11,0:11:33.10:0,33,424	0/0:12,0:12:36.08:0,36,458	0/0:25,0:23:54.45:0,54,667	0/0:8,0:8:24.04:0,24,282	0/0:19,0:18:53.78:0,54,620	0/0:15,0:13:33.06:0,33,364	0/0:13,0:11:14:0,14,112	0/0:9,0:8:8.96:0,9,81	0/1:13,1:12:49.12:70,0,49	0/0:10,0:8:24.08:0,24,319	0/0:7,0:5:15.05:0,15,189	0/0:19,0:18:31.99:0,32,358	0/0:15,0:14:32.30:0,32,405	0/0:12,0:9:24.03:0,24,277	0/0:30,0:26:72.12:0,72,829	0/0:8,0:6:17.64:0,18,202	1/1:6,0:7:8.62:86,9,0	0/1:9,1:9:52.30:134,0,52	0/1:9,5:10:40.86:49,0,41	0/1:15,0:14:80.77:83,0,81	0/0:24,0:22:65.91:0,66,688	0/0:19,0:17:48.10:0,48,575	0/0:10,0:7:21.07:0,21,280
chr10	93224094	.	GC	G	6508.57	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=16.076;DP=663;FS=10.914;HRun=1;HaplotypeScore=79.8274;InbreedingCoeff=0.9997;MQ=79.16;MQ0=0;MQRankSum=-1.336;QD=38.29;ReadPosRankSum=4.005;VQSLOD=4.8466;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1910	0/0:12,0:12:36.12:0,36,576	0/0:16,0:16:44.89:0,45,530	0/0:17,1:18:42.89:0,43,585	0/0:18,0:18:54.18:0,54,863	0/0:24,0:24:72.21:0,72,1099	0/0:25,0:25:75.26:0,75,1199	0/0:28,0:28:84.28:0,84,1322	0/0:28,0:28:81.28:0,81,1292	0/0:27,0:27:81.26:0,81,1255	0/0:12,0:12:33.11:0,33,528	1/1:1,24:25:72.17:979,72,0	1/1:0,18:18:45.15:629,45,0	1/1:1,21:22:63.21:872,63,0	0/0:24,0:24:72.25:0,72,1149	0/0:26,0:26:78.27:0,78,1243	0/0:34,0:34:99:0,102,1576	0/0:12,0:12:36.12:0,36,576	0/0:18,0:18:54.16:0,54,837	0/0:20,0:20:57.16:0,57,864	0/0:54,0:54:99:0,163,2585	1/1:0,26:26:72.24:1007,72,0	1/1:0,13:13:33.11:461,33,0	1/1:0,45:45:99:1888,135,0	1/1:0,21:21:48.16:672,48,0	0/0:24,0:24:72.25:0,72,1150	0/0:23,0:23:69.24:0,69,1103	0/0:9,0:9:27.09:0,27,432
chr10	93224575	.	AACACACAC	A	4255.43	PASS	AB=0.909;AC=17;AF=0.304;AN=56;BaseQRankSum=3.181;DP=569;FS=0.000;HRun=0;HaplotypeScore=183.0356;InbreedingCoeff=0.8227;MQ=59.47;MQ0=6;MQRankSum=-2.173;QD=22.88;ReadPosRankSum=2.459;VQSLOD=4.1343;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:35:84.26:0,84,1689	0/0:8,0:8:21.06:0,21,478	0/0:36,0:18:26.23:0,26,479	0/0:24,0:18:32.80:0,33,552	0/0:14,0:13:18.03:0,18,236	0/0:8,0:10:20.66:0,21,466	0/0:38,0:40:67.85:0,68,1260	0/0:15,0:15:30.08:0,30,512	0/0:14,0:15:12.02:0,12,278	0/0:9,0:21:55.40:0,55,1149	0/0:17,0:16:21.06:0,21,368	1/1:11,4:15:37.97:568,38,0	1/1:7,4:11:24.06:440,24,0	1/1:18,11:29:63.11:1140,63,0	0/0:17,0:18:33.11:0,33,845	0/0:6,0:20:6.02:0,6,186	1/1:36,0:36:3.01:56,3,0	0/0:9,0:24:9.03:0,9,216	0/0:18,0:19:36.12:0,36,549	0/0:9,0:14:5.98:0,6,47	0/0:33,0:32:29.72:0,30,585	1/1:0,16:15:15.05:357,15,0	1/1:6,16:22:11.77:281,12,0	1/1:29,5:34:59.95:935,60,0	1/1:7,5:12:21.06:429,21,0	0/1:9,1:10:48.12:48,0,343	0/0:7,0:7:12.51:0,13,357	0/0:8,0:8:21.04:0,21,418
chr10	93224578	.	ACACACACACACACACACACGCACGCACGCACGCACG	A	202.79	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.837;DP=561;FS=8.479;HRun=0;HaplotypeScore=415.0134;InbreedingCoeff=0.6223;MQ=56.07;MQ0=7;MQRankSum=-0.331;QD=5.79;ReadPosRankSum=-0.818;VQSLOD=0.7148;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.28:0,87,6575	0/0:7,0:7:21.07:0,21,1885	0/0:33,0:15:45.14:0,45,1667	0/0:23,0:17:39.10:0,39,1791	0/0:15,0:14:18.06:0,18,438	0/0:11,0:11:23.27:0,23,1620	0/0:40,0:39:77.98:0,78,4114	0/0:15,0:15:42.14:0,42,1621	0/0:16,0:15:15.04:0,15,1020	0/0:21,0:21:58.75:0,59,4658	0/0:16,0:15:21.07:0,21,952	0/0:15,0:15:42.10:0,42,1076	0/0:9,0:9:24.07:0,24,631	0/0:27,0:27:69.12:0,69,1386	0/0:17,0:17:45.11:0,45,4279	0/0:21,0:20:14.50:0,14,1040	1/1:0,35:35:3.01:280,3,0	0/0:24,0:22:13.91:0,14,1283	0/0:21,0:20:48.15:0,48,1390	0/0:12,0:12:6.02:0,6,130	0/0:40,0:40:51.40:0,51,4157	0/0:16,0:15:17.94:0,18,467	0/0:20,0:20:18.03:0,18,325	0/0:35,0:34:66.07:0,66,1602	0/0:12,0:12:24.07:0,24,583	0/0:10,0:10:30.10:0,30,1722	0/0:8,0:8:13.29:0,13,1343	0/0:9,0:9:24.08:0,24,2221
chr10	93224594	.	A	ACACACACACACACACG	4114.20	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-3.453;DP=522;FS=4.560;HRun=0;HaplotypeScore=229.0378;InbreedingCoeff=-0.0853;MQ=49.39;MQ0=9;MQRankSum=-1.879;QD=14.14;ReadPosRankSum=-1.773;VQSLOD=1.9138;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:71.83:0,72,1337	0/0:6,0:6:15.03:0,15,304	0/0:22,0:9:17.11:0,17,216	0/1:16,0:10:3.22:3,0,331	0/1:13,0:12:8.95:106,0,9	0/1:11,0:10:29.50:240,0,30	0/1:45,0:44:40.62:856,0,41	0/1:13,0:13:19.82:411,0,20	1/1:5,9:19:6.49:230,6,0	0/1:22,0:21:81.88:622,0,82	0/1:16,0:15:3.96:190,0,4	0/0:12,0:12:26.96:0,27,547	0/0:9,0:9:21.05:0,21,526	0/0:19,0:19:41.99:0,42,1114	0/0:10,0:12:33.11:0,33,1103	0/1:17,0:17:29.18:148,0,29	0/0:35,0:35:3.01:0,3,97	0/1:21,0:19:99:118,0,106	1/1:19,0:18:12.30:455,12,0	0/0:14,0:14:11.98:0,12,97	0/1:46,0:44:99:387,0,179	0/0:16,0:15:15.52:0,16,478	0/0:16,0:16:12.03:0,12,291	0/0:30,0:29:47.01:0,47,800	0/0:8,0:8:18.06:0,18,592	0/1:13,0:12:99:320,0,169	0/1:8,0:8:13.17:13,0,52	0/1:11,0:11:16.65:17,0,418
chr10	93224596	.	ACG	A	1292.40	PASS	AB=0.959;AC=23;AF=0.411;AN=56;BaseQRankSum=8.147;DP=522;FS=6.416;HRun=0;HaplotypeScore=141.3351;InbreedingCoeff=-0.1436;MQ=49.11;MQ0=9;MQRankSum=-5.781;QD=3.40;ReadPosRankSum=4.138;VQSLOD=2.0618;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:35.83:0,36,778	0/0:6,0:6:18.01:0,18,241	0/0:20,0:9:20.87:0,21,198	0/0:16,0:10:2.01:0,2,187	0/1:13,0:12:16.52:19,0,17	0/1:11,0:10:23.23:23,0,91	0/1:36,8:43:99:291,0,228	0/1:9,2:11:53.09:86,0,53	0/1:17,1:17:17.25:17,0,24	0/1:22,0:21:20.14:20,0,289	0/1:14,2:15:17.04:17,0,77	0/1:13,0:13:44.57:45,0,173	0/1:12,0:12:63.66:64,0,74	0/1:21,0:21:62.72:121,0,63	0/0:13,0:13:12.25:0,12,404	0/0:14,0:14:8.97:0,9,96	1/1:35,0:35:2.84:14,3,0	0/0:21,0:19:23.67:0,24,174	0/1:20,0:19:14.34:151,0,14	0/0:15,0:15:14.84:0,15,102	0/1:46,1:45:19.41:19,0,360	1/1:16,0:15:17.04:84,17,0	1/1:16,0:16:10.74:48,11,0	0/1:32,0:31:1.05:1,0,304	0/1:8,0:8:11.85:51,0,12	0/1:12,2:13:85.74:86,0,136	0/0:8,0:8:14.43:0,14,193	1/1:2,9:11:20.61:306,21,0
chr10	93224618	.	GCACGCACGCACA	G	5277.74	PASS	AB=0.950;AC=17;AF=0.304;AN=56;BaseQRankSum=9.076;DP=468;FS=2.302;HRun=0;HaplotypeScore=176.9230;InbreedingCoeff=0.8722;MQ=50.13;MQ0=5;MQRankSum=-5.791;QD=34.50;ReadPosRankSum=2.717;VQSLOD=4.6364;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.09:0,81,1663	0/0:7,0:7:21.03:0,21,588	0/0:12,0:8:22.80:0,23,365	0/0:13,0:9:20.24:0,20,292	0/0:6,0:5:6.02:0,6,182	0/0:11,0:10:23.87:0,24,551	0/0:31,0:31:66.06:0,66,1747	0/0:10,0:10:24.02:0,24,471	0/0:24,0:23:41.94:0,42,679	0/0:16,0:15:42.14:0,42,1632	0/0:13,0:13:21.06:0,21,612	1/1:9,3:12:36.06:698,36,0	1/1:7,4:11:27.06:708,27,0	1/1:8,11:19:51.13:1418,51,0	0/0:11,0:11:24.06:0,24,1004	0/0:12,0:12:24.05:0,24,687	1/1:34,0:34:5.91:81,6,0	0/0:23,0:23:43.72:0,44,1089	0/0:20,0:19:50.95:0,51,657	0/0:13,0:13:24.08:0,24,712	0/0:43,0:41:71.60:0,72,2561	1/1:10,7:14:24.07:664,24,0	1/1:10,5:15:24.01:609,24,0	1/1:15,5:19:27.03:516,27,0	1/1:1,5:6:15.05:527,15,0	0/1:18,1:18:55.51:56,0,1000	0/0:11,0:11:26.61:0,27,919	0/0:9,0:9:18.06:0,18,669
chr10	93225298	.	CGT	C	735.33	PASS	AB=0.876;AC=21;AF=0.457;AN=46;BaseQRankSum=3.461;DP=492;FS=4.203;HRun=0;HaplotypeScore=71.2820;InbreedingCoeff=0.1649;MQ=67.56;MQ0=10;MQRankSum=0.464;QD=2.81;ReadPosRankSum=-0.702;VQSLOD=0.8209;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,1:33:31.42:31,0,158	0/0:4,0:4:6.02:0,6,89	./.	./.	1/1:17,7:25:12.03:130,12,0	0/0:18,0:18:2.99:0,3,24	0/0:19,0:18:6.02:0,6,81	1/1:28,0:28:1.25:3,1,0	1/1:16,1:21:10.10:82,10,0	./.	0/1:9,3:12:27.38:86,0,27	0/0:13,0:13:12.04:0,12,173	0/1:8,2:10:26.50:26,0,39	0/1:12,0:12:22.38:22,0,61	0/0:20,0:20:24.08:0,24,351	0/1:6,2:9:30.02:96,0,30	0/0:10,0:19:15.02:0,15,162	0/1:18,7:25:84.90:139,0,85	./.	1/1:11,4:16:3.01:33,3,0	1/1:32,5:37:11.88:113,12,0	0/0:8,0:8:3.01:0,3,44	0/1:10,0:10:20.36:20,0,122	0/0:37,0:37:36.10:0,36,501	0/0:17,0:17:21.07:0,21,301	1/1:5,3:8:3:32,3,0	1/1:14,0:15:8.36:76,8,0	./.
chr10	93225560	.	CA	C	700.23	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=6.549;DP=424;FS=0.637;HRun=9;HaplotypeScore=40.7311;InbreedingCoeff=0.5490;MQ=73.86;MQ0=0;MQRankSum=0.743;QD=17.08;ReadPosRankSum=-0.743;VQSLOD=3.0102;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:43.95:0,44,694	0/0:6,0:6:18.03:0,18,196	0/0:8,0:8:18:0,18,187	0/1:6,0:6:14.62:15,0,73	0/0:16,0:16:42.08:0,42,451	1/1:0,16:16:45.02:412,45,0	1/1:1,14:16:44.06:390,44,0	0/0:32,0:32:81.24:0,81,934	0/0:14,0:14:42.12:0,42,485	0/0:14,0:14:39.08:0,39,430	0/0:23,0:23:63.18:0,63,719	0/0:15,0:15:42.12:0,42,485	0/0:9,0:9:27.08:0,27,312	0/1:3,0:3:18.27:18,0,60	0/0:7,0:7:21.06:0,21,241	0/0:13,1:14:5.63:0,6,319	0/0:10,0:10:27.03:0,27,287	0/0:13,0:14:38.89:0,39,404	0/0:22,0:22:51.11:0,51,558	0/0:26,2:29:20.12:0,20,721	0/0:13,1:14:11.64:0,12,377	0/0:14,0:14:33.10:0,33,381	0/0:18,0:18:51.15:0,51,586	0/0:10,1:11:2.63:0,3,284	0/0:9,0:9:27.08:0,27,312	0/0:17,0:17:45.12:0,45,504	0/0:23,0:23:66.18:0,66,753	0/0:19,0:19:48.12:0,48,541
chr10	93226661	.	GCACA	G	5787.06	PASS	AB=0.829;AC=43;AF=0.768;AN=56;BaseQRankSum=-1.036;DP=468;FS=3.039;HRun=0;HaplotypeScore=93.2898;InbreedingCoeff=0.5767;MQ=77.40;MQ0=20;MQRankSum=0.959;QD=16.49;ReadPosRankSum=4.232;VQSLOD=3.9710;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:40:66.04:908,66,0	1/1:8,0:7:14.94:156,15,0	0/0:39,0:16:16.76:0,17,219	0/0:42,0:26:17.37:0,17,136	1/1:6,5:10:14.53:83,15,0	1/1:12,0:12:27.92:357,28,0	1/1:17,0:17:34.92:503,35,0	1/1:6,10:16:24.29:388,24,0	1/1:11,0:11:24.06:329,24,0	1/1:8,10:18:24.54:371,25,0	1/1:1,5:6:11.87:80,12,0	0/1:7,0:7:3.94:38,0,4	1/1:10,0:10:2.26:33,2,0	0/1:14,0:14:21.26:28,0,21	1/1:12,0:12:21.06:305,21,0	1/1:7,0:7:17.93:210,18,0	0/0:14,0:31:10.63:0,11,100	1/1:12,0:11:12.93:124,13,0	1/1:1,3:4:9.01:101,9,0	1/1:14,0:14:24.68:207,25,0	1/1:38,0:36:64.82:756,65,0	0/1:3,0:12:0:0,0,0	0/1:3,0:12:0:0,0,0	1/1:29,0:29:27.76:132,28,0	0/1:10,0:10:2.30:12,0,2	1/1:4,14:18:36.02:468,36,0	1/1:12,0:11:17.72:197,18,0	0/0:4,0:3:3.43:0,3,20
chr10	93227403	.	CCACACACA	C	3925.76	PASS	AB=0.803;AC=20;AF=0.370;AN=54;BaseQRankSum=9.879;DP=568;FS=9.993;HRun=0;HaplotypeScore=146.9394;InbreedingCoeff=0.7730;MQ=61.14;MQ0=28;MQRankSum=-9.992;QD=18.17;ReadPosRankSum=0.004;VQSLOD=2.3925;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:24:15.50:0,16,449	0/0:7,0:6:6.02:0,6,184	./.	0/0:44,0:7:3.01:0,3,73	0/0:12,0:11:18.06:0,18,631	1/1:11,0:18:18.06:328,18,0	0/1:13,0:21:2.61:314,0,3	0/0:25,0:24:24.08:0,24,700	0/0:23,0:24:51.18:0,51,1829	0/0:20,0:18:24.08:0,24,615	0/0:10,0:10:9.03:0,9,321	1/1:4,3:9:12.04:261,12,0	1/1:9,8:17:27.09:660,27,0	1/1:18,8:26:27.09:680,27,0	0/0:15,0:22:14.58:0,15,428	0/0:10,0:10:27.09:0,27,950	1/1:16,0:21:9.03:167,9,0	0/1:23,0:25:5.90:6,0,1483	0/0:18,0:17:15.04:0,15,282	0/0:7,0:7:9.03:0,9,291	0/0:43,0:48:75.26:0,75,2297	1/1:12,8:20:9.03:227,9,0	1/1:8,7:15:12.04:302,12,0	1/1:13,9:22:17.76:453,18,0	1/1:12,7:19:21.07:529,21,0	0/0:11,0:10:21.07:0,21,589	0/0:15,0:18:30.56:0,31,882	0/0:2,0:2:6.02:0,6,202
chr10	93227884	.	A	AG	1903.46	PASS	AB=0.904;AC=18;AF=0.321;AN=56;BaseQRankSum=11.027;DP=663;FS=9.614;HRun=0;HaplotypeScore=188.4513;InbreedingCoeff=-0.5057;MQ=49.33;MQ0=13;MQRankSum=-7.717;QD=4.92;ReadPosRankSum=-4.275;VQSLOD=1.5236;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:88.51:0,89,1181	0/0:11,0:11:33.10:0,33,446	0/0:45,0:12:0.04:0,0,297	0/0:46,0:17:17.96:0,18,340	0/1:36,0:36:50.32:50,0,1050	0/1:11,11:22:99:297,0,350	0/1:12,2:14:69.62:70,0,379	0/0:19,0:19:54.08:0,54,723	0/0:29,0:28:17.61:0,18,792	0/0:30,3:33:8.17:0,8,1041	0/1:24,0:23:64.76:65,0,669	0/1:13,6:18:99:111,0,448	0/1:6,4:10:99:103,0,160	0/1:15,6:21:99:163,0,246	0/0:16,0:16:48.12:0,48,609	0/1:18,1:17:99:214,0,365	0/1:27,1:28:55.16:55,0,706	0/1:21,0:20:65.05:65,0,532	0/1:13,0:13:99:121,0,323	0/1:21,0:20:26.48:26,0,610	0/0:21,0:20:27.73:0,28,570	0/1:18,6:24:99:105,0,463	0/0:21,2:22:5.49:0,5,532	0/1:19,2:21:47.23:47,0,399	0/1:19,4:23:58.32:58,0,504	0/1:34,0:34:99:400,0,675	0/1:25,0:25:98.53:99,0,681	0/1:12,0:12:10.86:11,0,383
chr10	93227917	.	AAAT	A	2068.36	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.054;DP=612;FS=2.504;HRun=0;HaplotypeScore=165.6067;InbreedingCoeff=0.9986;MQ=62.97;MQ0=0;MQRankSum=-2.545;QD=35.06;ReadPosRankSum=0.701;VQSLOD=4.0452;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:66.99:0,67,1641	0/0:13,0:13:39.13:0,39,854	0/0:29,0:23:40.98:0,41,918	0/0:26,0:20:29.91:0,30,736	0/0:33,0:33:84.29:0,84,1823	1/1:0,16:16:39.13:621,39,0	1/1:2,10:12:26.66:433,27,0	0/0:26,0:25:63.22:0,63,1324	0/0:26,0:26:69.22:0,69,1434	0/0:36,0:36:99:0,105,2308	0/0:25,0:25:69.23:0,69,1435	0/0:17,0:17:39.13:0,39,860	0/0:12,0:12:30.10:0,30,629	0/0:19,0:19:35.96:0,36,738	0/0:17,0:17:51.16:0,51,1064	0/0:11,0:11:27.09:0,27,596	1/1:1,30:31:72.24:1157,72,0	0/0:27,0:26:49.47:0,49,1409	0/0:12,0:12:36.12:0,36,757	0/0:21,0:21:54.18:0,54,1176	0/0:20,0:20:37.12:0,37,1007	0/0:17,0:17:36.12:0,36,757	0/0:27,0:26:51.18:0,51,1226	0/0:21,0:21:47.37:0,47,905	0/0:26,0:26:66.19:0,66,1400	0/0:21,0:21:60.21:0,60,1320	0/0:23,0:23:48.16:0,48,1046	0/0:19,0:19:51.17:0,51,1054
chr10	93227961	.	CAA	C	5457.19	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.630;DP=620;FS=8.938;HRun=3;HaplotypeScore=92.0668;InbreedingCoeff=0.9817;MQ=64.85;MQ0=5;MQRankSum=1.072;QD=40.73;ReadPosRankSum=2.008;VQSLOD=3.7764;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.31:0,90,1698	0/0:17,0:17:48.16:0,48,886	0/0:23,0:18:7.71:0,8,522	0/0:21,0:15:31.86:0,32,534	0/0:27,0:27:78.25:0,78,1420	0/0:22,0:23:59.69:0,60,1095	0/0:8,0:8:24.08:0,24,464	0/0:28,0:26:78.25:0,78,1383	0/0:21,0:21:63.20:0,63,1154	0/0:42,0:41:99:0,117,2198	0/0:26,0:26:78.27:0,78,1501	1/1:1,13:14:30.10:459,30,0	1/1:0,10:10:27.09:413,27,0	1/1:0,22:22:57.19:864,57,0	0/0:24,0:24:72.24:0,72,1345	0/0:9,0:9:27.09:0,27,513	0/0:37,0:37:93.30:0,93,1686	0/0:33,0:32:96.32:0,96,1810	0/0:16,0:16:48.16:0,48,908	0/0:31,0:31:93.31:0,93,1748	0/0:14,0:14:42.14:0,42,804	1/1:0,22:22:63.21:964,63,0	1/1:0,19:19:57.19:873,57,0	1/1:2,18:20:13.99:736,14,0	1/1:0,27:27:75.25:1148,75,0	0/0:20,0:19:57.19:0,57,1050	0/0:21,0:21:40.43:0,40,1092	0/0:13,0:13:39.13:0,39,704
chr10	93228030	.	CAAAAGAAAGGAAGGAAGAAACAAAG	C	3519.51	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.912;DP=510;FS=0.000;HRun=0;HaplotypeScore=313.2095;InbreedingCoeff=0.8187;MQ=68.21;MQ0=1;MQRankSum=-7.273;QD=30.34;ReadPosRankSum=-0.741;VQSLOD=1.5626;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:20:30.09:0,30,1664	0/0:10,0:10:18.06:0,18,972	0/1:25,0:22:20.84:21,0,203	0/0:16,0:12:4.39:0,4,94	0/0:30,0:30:72.25:0,72,4375	0/0:20,0:20:39.13:0,39,2503	0/0:8,0:8:12.04:0,12,393	0/0:27,0:26:27.06:0,27,584	0/0:18,0:18:39.13:0,39,2577	0/0:31,0:30:57.17:0,57,2659	0/0:18,0:18:27.09:0,27,1468	1/1:9,0:9:6.02:146,6,0	1/1:7,0:7:9.03:394,9,0	1/1:16,0:16:15.05:505,15,0	0/0:12,0:12:24.07:0,24,1450	0/0:16,0:16:39.13:0,39,2177	0/0:24,0:25:51.02:0,51,2709	0/0:24,0:23:40.02:0,40,2106	0/0:18,0:17:39.13:0,39,1760	0/0:39,0:39:78.27:0,78,5025	0/0:13,0:13:30.10:0,30,1960	1/1:13,0:13:6.02:213,6,0	1/1:11,2:13:12:430,12,0	1/1:13,0:14:18.03:519,18,0	1/1:17,2:19:36.12:1291,36,0	0/0:22,0:21:45.15:0,45,2544	0/0:13,0:12:21.07:0,21,1157	0/0:12,0:13:33.10:0,33,2062
chr10	93228051	.	C	CAAGG	2359.14	PASS	AB=0.689;AC=10;AF=0.179;AN=56;BaseQRankSum=9.075;DP=502;FS=0.594;HRun=0;HaplotypeScore=94.7267;InbreedingCoeff=0.5061;MQ=62.49;MQ0=3;MQRankSum=-8.055;QD=31.88;ReadPosRankSum=-1.549;VQSLOD=3.3473;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:45.14:0,45,801	0/0:7,0:7:21.07:0,21,405	0/0:28,0:22:30.27:0,30,671	0/0:19,0:12:14.59:0,15,235	0/0:26,0:26:78.27:0,78,1511	0/0:18,0:18:51.17:0,51,988	0/0:8,0:8:21.02:0,21,334	0/0:30,0:30:72.18:0,72,1167	0/0:25,0:25:72.21:0,72,1297	0/0:29,0:29:81.25:0,81,1419	0/0:14,0:14:39.11:0,39,692	1/1:6,2:8:13.29:275,13,0	0/1:4,4:8:6.31:348,0,6	0/1:6,5:11:86.13:287,0,86	0/0:16,0:16:45.13:0,45,793	0/0:14,0:14:39.13:0,39,756	0/0:21,0:21:48.95:0,49,978	0/0:20,0:19:52.25:0,52,882	0/0:22,0:22:66.23:0,66,1262	0/0:41,0:41:99:0,120,2182	0/0:14,0:14:42.12:0,42,769	0/1:7,4:11:23.89:469,0,24	1/1:7,2:9:18.67:380,19,0	0/1:6,6:12:50.33:346,0,50	1/1:10,5:15:7.46:411,7,0	0/0:23,0:23:69.13:0,69,1193	0/0:14,0:13:39.12:0,39,713	0/0:20,0:20:57.09:0,57,989
chr10	93228056	.	A	AAAC	1843.64	PASS	AB=0.907;AC=7;AF=0.125;AN=56;BaseQRankSum=10.129;DP=513;FS=0.536;HRun=0;HaplotypeScore=88.9170;InbreedingCoeff=0.0461;MQ=65.23;MQ0=4;MQRankSum=-8.331;QD=22.76;ReadPosRankSum=1.099;VQSLOD=3.5605;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.14:0,45,738	0/0:7,0:7:21.07:0,21,355	0/0:29,0:21:35.67:0,36,668	0/0:22,0:15:23.38:0,23,356	0/0:26,0:26:78.27:0,78,1326	0/0:20,0:20:57.19:0,57,964	0/0:9,0:9:27.08:0,27,424	0/0:30,0:30:81.23:0,81,1258	0/0:27,0:27:72.23:0,72,1198	0/0:25,0:25:69.21:0,69,1140	0/0:13,0:13:36.12:0,36,614	0/1:6,0:6:2.20:127,0,2	0/1:12,1:13:27.55:201,0,28	0/1:13,0:13:25.61:256,0,26	0/0:15,0:15:42.14:0,42,688	0/0:16,0:16:45.14:0,45,739	0/0:21,0:21:24.79:0,25,821	0/0:18,0:17:39.92:0,40,713	0/0:23,0:23:69.24:0,69,1159	0/0:38,0:38:99:0,108,1839	0/0:15,0:15:45.12:0,45,714	0/1:11,0:11:43.67:140,0,44	0/1:8,2:10:36.10:325,0,36	0/1:9,2:11:4.70:283,0,5	0/1:11,6:17:12.89:643,0,13	0/0:26,0:26:69.23:0,69,1147	0/0:15,0:14:39.12:0,39,638	0/0:20,0:20:34.05:0,34,866
chr10	93228689	.	CT	C	5986.94	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.904;DP=678;FS=0.328;HRun=3;HaplotypeScore=77.7535;InbreedingCoeff=0.9890;MQ=81.49;MQ0=0;MQRankSum=-5.147;QD=34.81;ReadPosRankSum=2.997;VQSLOD=5.4336;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1575	0/0:6,0:6:18.06:0,18,259	0/0:34,0:34:93.32:0,93,1223	0/0:31,0:31:79.84:0,80,1082	0/0:24,0:24:66.22:0,66,948	0/0:17,0:17:48.16:0,48,691	0/0:24,0:24:69.23:0,69,994	0/0:32,0:32:90.30:0,90,1296	0/0:29,0:29:87.27:0,87,1216	0/0:26,0:26:75.25:0,75,1080	0/0:18,0:18:48.13:0,48,670	1/1:0,14:14:42.13:521,42,0	1/1:1,28:29:78.25:966,78,0	1/1:1,27:28:75.24:930,75,0	0/0:24,0:24:69.22:0,69,975	0/0:32,0:32:96.32:0,96,1382	1/1:0,23:23:69.22:855,69,0	0/0:15,0:15:45.15:0,45,647	0/0:27,0:27:72.24:0,72,1035	0/0:42,0:42:99:0,126,1796	0/0:32,0:32:90.27:0,90,1274	1/1:0,17:17:48.15:595,48,0	1/1:0,17:17:51.16:632,51,0	1/1:0,22:22:66.21:818,66,0	1/1:1,21:22:54.17:669,54,0	0/0:33,0:33:99:0,99,1410	0/0:19,0:17:57.15:0,57,797	0/0:3,0:3:9.03:0,9,130
chr10	93229172	.	C	CT	2564.12	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.967;DP=436;FS=1.303;HRun=8;HaplotypeScore=53.5751;InbreedingCoeff=0.9539;MQ=58.50;MQ0=5;MQRankSum=-0.086;QD=27.57;ReadPosRankSum=5.665;VQSLOD=3.6893;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:75.03:0,75,686	0/0:13,0:13:36.02:0,36,329	0/0:2,0:2:3:0,3,27	0/0:5,0:5:12:0,12,106	0/0:15,0:15:42:0,42,379	0/0:15,0:15:42:0,42,379	0/0:16,0:15:45.02:0,45,412	0/0:22,0:20:44.97:0,45,403	0/0:15,0:15:33.01:0,33,302	0/0:16,0:15:39.02:0,39,357	0/0:30,1:30:46.33:0,46,678	1/1:1,9:10:27.08:312,27,0	1/1:0,12:11:30.09:346,30,0	1/1:1,12:13:36.10:407,36,0	0/0:8,0:8:12:0,12,110	0/0:8,0:8:18.01:0,18,165	0/0:23,0:23:51:0,51,460	0/0:14,0:14:30.01:0,30,275	0/0:20,0:20:51.03:0,51,467	0/0:20,0:20:51.02:0,51,466	0/0:12,0:12:24.01:0,24,220	1/1:2,14:16:42.12:485,42,0	1/1:1,10:11:27.08:312,27,0	1/1:2,11:12:33.10:381,33,0	1/1:1,17:18:45.13:519,45,0	0/0:22,0:22:57.01:0,57,518	0/0:26,0:26:65.97:0,66,591	0/0:10,0:8:18:0,18,165
chr10	93229927	.	ATG	A	89.65	PASS	AC=2;AF=0.20;AN=10;BaseQRankSum=1.031;DP=363;FS=0.000;HRun=0;HaplotypeScore=17.7715;MQ=9.37;MQ0=285;MQRankSum=-0.546;QD=9.96;ReadPosRankSum=0.546;VQSLOD=2.6575;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:5,4:4:12.04:165,12,0	./.	./.	0/0:29,0:8:6.02:0,6,105	./.	./.	./.	./.	0/0:26,0:3:3.01:0,3,53	0/0:16,0:4:12.04:0,12,211	./.	./.	./.	./.	./.	./.	./.	./.	0/0:23,0:12:15.05:0,15,247	./.	./.	./.	./.	./.	./.	./.	./.
chr10	93233717	.	T	TG	2882.09	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=11.156;DP=507;FS=1.521;HRun=5;HaplotypeScore=112.5661;InbreedingCoeff=0.9380;MQ=73.30;MQ0=0;MQRankSum=-1.235;QD=22.17;ReadPosRankSum=3.773;VQSLOD=2.1568;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1149	0/0:12,0:12:36.09:0,36,384	0/0:12,0:13:14.54:0,15,239	0/1:13,0:13:1.76:2,0,218	0/0:10,0:10:24.06:0,24,258	0/0:16,0:16:45.11:0,45,480	0/0:22,0:22:63.16:0,63,676	0/0:22,0:22:51.11:0,51,541	0/0:28,0:28:78.19:0,78,831	0/0:16,0:16:39.10:0,39,418	0/0:7,0:7:18.04:0,18,190	1/1:3,10:13:27.09:355,27,0	1/1:3,9:12:24.08:316,24,0	1/1:0,13:13:33.11:434,33,0	0/0:15,0:15:45.11:0,45,482	0/0:8,0:8:24.06:0,24,258	0/0:45,0:45:99:0,123,1321	0/0:14,0:14:42.11:0,42,451	0/0:14,0:14:30.06:0,30,311	0/0:17,0:17:42.09:0,42,443	0/0:36,0:36:87.21:0,87,933	1/1:3,14:17:30.10:395,30,0	1/1:2,25:27:51.17:670,51,0	1/1:6,16:22:42.14:553,42,0	1/1:3,10:13:27.09:355,27,0	0/0:18,0:18:51.13:0,51,548	0/0:16,0:16:48.12:0,48,516	0/0:10,0:10:27.07:0,27,290
chr10	93233856	.	CAGAGAGAGAGAGAG	C	2360.56	PASS	AB=0.904;AC=21;AF=0.438;AN=48;BaseQRankSum=3.961;DP=454;FS=25.840;HRun=0;HaplotypeScore=158.1520;InbreedingCoeff=0.5811;MQ=50.56;MQ0=16;MQRankSum=-4.535;QD=11.51;ReadPosRankSum=-2.361;VQSLOD=0.9369;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:25:6.49:0,6,118	0/1:10,0:11:41.93:52,0,42	./.	./.	./.	1/1:8,0:12:6.02:195,6,0	1/1:13,0:20:9.03:293,9,0	1/1:18,0:17:5.37:39,5,0	1/1:18,11:28:18.06:702,18,0	1/1:18,2:20:2.02:6,2,0	0/0:9,5:13:3.07:0,3,10	0/0:12,0:11:12.04:0,12,475	0/0:13,0:12:15.05:0,15,384	0/0:12,0:10:15.05:0,15,633	0/0:13,0:22:8.95:0,9,68	1/1:6,6:12:9.03:305,9,0	0/0:25,0:25:36.12:0,36,929	1/1:6,6:12:9.03:353,9,0	./.	1/1:12,3:15:9.03:195,9,0	0/1:16,1:17:0.10:0,0,1	0/0:19,0:16:8.69:0,9,436	0/0:11,0:11:6.02:0,6,205	0/0:23,0:19:12.04:0,12,494	0/0:16,0:14:14.95:0,15,483	0/1:18,0:18:50.51:250,0,51	1/1:16,0:15:5.89:138,6,0	0/0:14,0:13:21.07:0,21,872
chr10	93233899	.	AG	A	304.57	PASS	AB=0.820;AC=8;AF=0.143;AN=56;BaseQRankSum=3.873;DP=455;FS=3.070;HRun=1;HaplotypeScore=79.1065;InbreedingCoeff=0.0472;MQ=58.27;MQ0=35;MQRankSum=-1.683;QD=3.27;ReadPosRankSum=-1.398;VQSLOD=-0.3770;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:33.04:0,33,417	0/0:3,0:3:4.43:0,4,41	0/0:42,0:14:30.06:0,30,340	0/0:65,0:23:36.55:0,37,452	0/0:10,0:10:18.06:0,18,226	0/0:16,0:15:11.88:0,12,255	0/0:18,0:17:24.45:0,24,273	0/0:21,0:21:58.13:0,58,722	0/0:18,0:18:19.47:0,19,202	0/0:8,0:8:18.06:0,18,227	0/0:14,0:12:15.48:0,15,191	0/1:8,5:12:62.66:121,0,63	0/1:6,5:8:13.83:71,0,14	0/1:8,1:7:31.96:32,0,74	0/0:15,0:15:23.54:0,24,243	0/0:11,0:11:14.17:0,14,156	0/0:18,0:16:29.65:0,30,324	0/0:14,0:14:27.77:0,28,295	0/0:9,0:9:18.53:0,19,228	0/0:9,0:9:18.06:0,18,227	0/0:20,0:20:42.55:0,43,512	0/1:15,6:14:46.24:101,0,46	1/1:4,4:7:2.97:20,3,0	0/1:16,4:14:49.42:85,0,49	0/1:11,0:9:0.92:1,0,19	0/0:6,0:6:11.52:0,12,120	0/0:10,0:9:25.32:0,25,306	0/0:6,0:6:14.25:0,14,150
chr10	93233900	.	G	GA	462.30	PASS	AB=0.841;AC=10;AF=0.179;AN=56;BaseQRankSum=1.946;DP=463;FS=3.197;HRun=1;HaplotypeScore=84.1890;InbreedingCoeff=0.4072;MQ=58.04;MQ0=35;MQRankSum=-1.273;QD=4.77;ReadPosRankSum=-1.412;VQSLOD=0.0251;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:32.56:0,33,420	0/0:3,0:3:5.80:0,6,56	0/0:42,0:14:30.54:0,31,345	0/0:65,0:23:23.95:0,24,427	0/0:10,0:10:18.06:0,18,228	0/0:16,0:15:24.45:0,24,285	0/0:18,0:17:25.36:0,25,299	0/0:21,0:21:58.13:0,58,727	0/0:18,0:18:32.27:0,32,287	0/0:9,0:9:18.06:0,18,229	0/0:15,0:13:15.51:0,16,192	0/1:12,0:12:6.76:146,0,7	1/1:10,1:8:6.02:80,6,0	0/1:6,2:7:34.66:55,0,35	0/0:15,0:15:26.74:0,27,278	0/0:11,0:11:17.84:0,18,185	0/0:18,0:16:29.94:0,30,341	0/0:15,0:15:32.81:0,33,339	0/0:9,0:9:18.06:0,18,229	0/0:9,0:9:18.06:0,18,229	0/0:20,0:20:42.07:0,42,515	0/1:17,3:15:18.44:102,0,18	1/1:9,1:10:5.98:65,6,0	0/1:17,2:14:10.35:112,0,10	1/1:6,5:9:3.48:46,3,0	0/0:6,0:6:14.62:0,15,145	0/0:10,0:9:27:0,27,322	0/0:6,0:6:11.83:0,12,119
chr10	93233958	.	GACA	G	3744.45	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.133;DP=502;FS=8.673;HRun=0;HaplotypeScore=82.0480;InbreedingCoeff=0.9945;MQ=84.92;MQ0=3;MQRankSum=-2.888;QD=39.42;ReadPosRankSum=3.195;VQSLOD=4.5092;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.24:0,69,1545	0/0:5,0:5:15.05:0,15,324	0/0:27,0:27:55.48:0,55,1342	0/0:29,0:29:59.89:0,60,1416	0/0:17,0:17:51.18:0,51,1125	0/0:17,0:17:47.86:0,48,1088	0/0:30,0:30:87.30:0,87,1964	0/0:22,0:22:63.22:0,63,1375	0/0:21,0:21:60.21:0,60,1359	0/0:16,0:16:48.16:0,48,1088	0/0:13,0:13:36.12:0,36,811	1/1:1,13:14:35.88:598,36,0	1/1:1,12:12:36.12:600,36,0	1/1:0,10:10:27.09:450,27,0	0/0:23,0:23:66.23:0,66,1494	0/0:17,0:17:48.16:0,48,1088	0/0:26,0:26:63.22:0,63,1407	0/0:12,0:12:33.09:0,33,703	0/0:11,0:11:33.11:0,33,701	0/0:8,0:8:24.07:0,24,500	0/0:41,0:41:99:0,108,2375	1/1:1,10:10:18.06:299,18,0	1/1:0,19:19:42.14:700,42,0	1/1:3,12:12:27.09:450,27,0	1/1:0,13:13:39.13:649,39,0	0/0:20,0:20:54.18:0,54,1177	0/0:17,0:17:51.17:0,51,1132	0/0:9,0:9:27.09:0,27,606
chr10	93234444	.	CTTGATG	C	3728.53	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.256;DP=516;FS=1.703;HRun=0;HaplotypeScore=119.9547;InbreedingCoeff=0.9926;MQ=93.04;MQ0=0;MQRankSum=-11.879;QD=41.43;ReadPosRankSum=-2.817;VQSLOD=3.2659;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:99:0,114,3758	0/0:11,0:11:33.11:0,33,1148	0/0:26,0:26:60.20:0,60,1835	0/0:21,0:21:24.88:0,25,1266	0/0:23,0:23:69.24:0,69,2405	0/0:21,0:21:57.20:0,57,1985	0/0:29,0:29:84.29:0,84,2774	0/0:25,0:25:69.24:0,69,2235	0/0:18,0:18:45.14:0,45,1483	0/0:23,0:23:69.24:0,69,2400	0/0:13,0:13:36.12:0,36,1198	1/1:0,9:9:24.04:499,24,0	1/1:0,7:7:18.06:411,18,0	1/1:0,7:7:15.01:294,15,0	0/0:16,0:16:36.12:0,36,1255	0/0:12,0:12:30.10:0,30,992	0/0:28,0:28:84.29:0,84,2884	0/0:14,0:14:42.14:0,42,1441	0/0:18,0:18:48.16:0,48,1660	0/0:13,0:13:39.13:0,39,1337	0/0:28,0:28:72.23:0,72,2420	1/1:3,11:14:33.11:752,33,0	1/1:2,12:15:30.06:635,30,0	1/1:6,22:28:29.88:588,30,0	1/1:1,9:10:24.08:548,24,0	0/0:15,0:15:39.13:0,39,1220	0/0:24,0:24:69.24:0,69,2304	0/0:8,0:8:18.06:0,18,627
chr10	93236555	.	GGTGT	G	252.73	PASS	AB=1.000;AC=9;AF=0.173;AN=52;BaseQRankSum=-0.026;DP=480;FS=9.163;HRun=0;HaplotypeScore=90.6428;InbreedingCoeff=0.1929;MQ=67.89;MQ0=11;MQRankSum=1.948;QD=2.05;ReadPosRankSum=1.249;VQSLOD=1.1088;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,5:19:11.99:159,12,0	./.	0/0:24,0:18:0.47:0,0,1	0/0:18,0:17:0:0,0,0	0/0:23,0:23:3.01:0,3,55	0/0:21,0:21:3:0,3,70	0/0:21,0:21:2.74:0,3,13	0/0:43,0:42:42.05:0,42,545	0/0:14,0:14:0.94:0,1,205	0/0:21,0:21:36.05:0,36,480	0/0:8,0:7:3.01:0,3,49	0/1:13,0:12:28.13:28,0,53	0/1:9,0:9:15.03:62,0,15	0/0:18,0:18:17.97:0,18,168	1/1:5,4:9:6.02:93,6,0	0/0:9,0:9:5.75:0,6,114	0/1:27,0:27:19.84:20,0,117	0/0:19,0:18:27.06:0,27,441	0/0:11,0:11:12.04:0,12,202	0/1:10,0:10:0:0,0,0	0/0:33,0:33:3.70:0,4,49	0/0:4,0:3:0:0,0,0	0/0:5,0:5:5.99:0,6,49	0/1:33,0:32:14.55:15,0,164	./.	0/0:31,0:29:35.59:0,36,440	0/0:13,0:13:3.01:0,3,51	0/0:4,0:7:8.96:0,9,122
chr10	93236558	.	G	GTGTGTGTGTGTA	5232.77	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=-0.950;DP=478;FS=6.842;HRun=0;HaplotypeScore=159.3516;InbreedingCoeff=0.7091;MQ=63.22;MQ0=12;MQRankSum=-3.929;QD=22.27;ReadPosRankSum=-4.129;VQSLOD=1.8292;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:19:35.97:0,36,479	0/0:3,0:3:8.93:0,9,66	0/0:23,0:17:32.59:0,33,292	0/0:15,0:14:20.65:0,21,225	0/1:23,0:23:15.32:96,0,15	0/0:21,0:21:47.88:0,48,501	0/0:25,0:23:38.73:0,39,382	1/1:38,0:37:84.41:881,84,0	1/1:14,0:14:27:530,27,0	1/1:22,0:22:52.71:862,53,0	1/1:8,0:7:3.01:100,3,0	0/0:14,0:13:29.98:0,30,300	0/0:7,0:7:17.89:0,18,278	0/0:18,0:17:23.99:0,24,342	0/0:9,0:9:15.01:0,15,251	1/1:2,7:9:3:180,3,0	0/0:29,0:29:47.43:0,47,593	1/1:19,0:18:28.95:549,29,0	1/1:13,0:13:12.42:286,12,0	0/1:10,0:10:3.06:110,0,3	1/1:30,0:30:1.89:99,2,0	0/0:5,0:4:2.99:0,3,24	0/0:4,0:4:6.02:0,6,190	0/0:33,0:32:47.17:0,47,666	0/0:8,0:8:5.99:0,6,50	1/1:34,0:32:39.36:1203,39,0	1/1:1,12:15:6.02:339,6,0	0/0:7,0:7:17.68:0,18,151
chr10	93236568	.	G	GTA	1554.02	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=-1.904;DP=481;FS=2.922;HRun=0;HaplotypeScore=66.4858;InbreedingCoeff=0.0384;MQ=50.52;MQ0=34;MQRankSum=0.309;QD=6.56;ReadPosRankSum=0.734;VQSLOD=2.7745;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:41.84:0,42,326	0/0:3,0:3:8.93:0,9,66	0/0:23,0:13:32.33:0,32,291	0/0:28,0:12:22.35:0,22,231	0/1:17,0:17:15.32:96,0,15	0/0:19,0:19:47.95:0,48,422	0/0:20,0:18:17.64:0,18,296	0/1:34,0:32:71.92:419,0,72	0/1:17,0:15:3.52:129,0,4	0/1:21,0:21:31.67:278,0,32	1/1:4,3:6:3.01:50,3,0	0/0:15,0:14:38.91:0,39,329	0/0:9,0:9:17.92:0,18,150	0/0:17,0:16:23.99:0,24,216	0/0:10,0:10:14.96:0,15,119	0/1:9,0:9:17.21:25,0,17	0/0:26,0:25:48.20:0,48,399	0/1:23,0:22:51.91:269,0,52	0/1:13,0:12:47.26:120,0,47	0/1:10,0:10:6.28:77,0,6	1/1:7,21:29:3.44:55,3,0	0/0:8,0:7:2.99:0,3,24	0/0:4,0:4:6.02:0,6,70	0/0:34,0:31:47.94:0,48,424	0/0:6,0:6:8.99:0,9,74	0/1:37,0:33:99:156,0,295	1/1:12,0:12:3.01:30,3,0	0/1:8,0:8:6.49:6,0,71
chr10	93236600	.	GTGTA	G	359.20	PASS	AB=0.994;AC=12;AF=0.222;AN=54;BaseQRankSum=3.394;DP=426;FS=17.248;HRun=0;HaplotypeScore=76.0714;InbreedingCoeff=0.3245;MQ=70.50;MQ0=34;MQRankSum=2.092;QD=3.12;ReadPosRankSum=0.120;VQSLOD=0.0953;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:31.96:32,0,161	./.	0/0:25,0:10:9.46:0,9,168	0/0:52,0:29:54.51:0,55,649	0/0:12,0:12:8.99:0,9,82	0/0:9,0:9:11.08:0,11,221	0/0:11,0:11:26.84:0,27,242	0/0:28,0:28:75.72:0,76,637	0/0:17,0:15:25.57:0,26,280	0/0:17,0:17:37.37:0,37,453	0/0:10,0:10:11.99:0,12,101	0/1:10,0:9:17.68:166,0,18	1/1:1,10:11:5.88:119,6,0	0/0:19,0:18:2.92:0,3,24	0/1:9,0:9:21.86:22,0,102	0/0:5,0:5:12.01:0,12,195	1/1:22,1:22:1.62:56,2,0	0/0:22,0:20:50.87:0,51,585	0/0:15,0:14:41.83:0,42,405	0/1:6,0:6:0:0,0,0	0/0:27,0:27:23.67:0,24,188	0/1:6,0:6:0:0,0,0	0/0:4,0:4:0:0,0,1	0/1:26,1:25:34:51,0,34	1/1:3,0:3:5.90:49,6,0	0/0:26,0:24:62.03:0,62,767	0/0:7,0:7:14.91:0,15,153	0/0:5,0:5:11.98:0,12,183
chr10	93236602	.	GTA	G	538.18	PASS	AB=0.500;AC=15;AF=0.288;AN=52;BaseQRankSum=3.814;DP=398;FS=10.279;HRun=0;HaplotypeScore=61.2657;InbreedingCoeff=0.8200;MQ=74.92;MQ0=34;MQRankSum=0.015;QD=6.19;ReadPosRankSum=0.259;VQSLOD=1.7771;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:37.51:0,38,246	./.	0/0:26,0:11:12.44:0,12,191	0/0:54,0:31:53.13:0,53,647	0/0:12,0:12:5.99:0,6,48	0/0:7,0:7:18.46:0,18,181	0/0:11,0:11:18.92:0,19,188	0/0:29,0:29:45.49:0,45,404	0/0:17,0:15:22.07:0,22,175	0/0:13,0:13:20.94:0,21,225	0/0:9,0:9:9.88:0,10,77	1/1:9,0:8:20.34:157,20,0	1/1:10,0:10:5.84:54,6,0	1/1:3,13:15:6.02:88,6,0	0/0:9,0:9:20.33:0,20,145	0/0:5,0:5:12.01:0,12,141	1/1:2,15:16:9.02:112,9,0	0/0:21,0:19:42.36:0,42,376	0/0:15,0:14:32.81:0,33,285	./.	0/0:19,0:19:21.12:0,21,164	0/1:0,6:6:0:0,0,0	1/1:0,4:4:6.02:88,6,0	1/1:4,18:20:12.03:159,12,0	1/1:3,0:3:5.79:49,6,0	0/0:24,0:22:50.78:0,51,511	0/0:8,0:8:17.90:0,18,152	0/0:6,0:6:11.20:0,11,120
chr10	93236830	.	CTTAT	C	4465.70	PASS	AC=26;AF=0.520;AN=50;BaseQRankSum=-6.618;DP=272;FS=9.397;HRun=0;HaplotypeScore=58.6644;InbreedingCoeff=0.7045;MQ=65.03;MQ0=1;MQRankSum=2.623;QD=24.95;ReadPosRankSum=-0.259;VQSLOD=3.1782;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:14:15.01:0,15,223	0/0:2,0:2:3.01:0,3,55	./.	0/0:6,0:6:9.03:0,9,174	1/1:3,7:10:18.06:289,18,0	0/0:9,0:17:33.01:0,33,539	0/0:3,0:6:3.01:0,3,53	1/1:12,10:22:27.08:402,27,0	1/1:2,3:5:3.01:48,3,0	1/1:0,17:17:51.16:784,51,0	1/1:6,11:17:27.09:434,27,0	0/0:5,0:5:5.95:0,6,73	0/0:4,0:5:3.01:0,3,52	0/0:2,0:2:3.01:0,3,43	0/0:1,0:1:3.01:0,3,44	1/1:3,2:5:3.01:48,3,0	0/0:16,0:16:15.03:0,15,204	1/1:9,14:22:36.12:578,36,0	1/1:7,9:16:24.08:374,24,0	1/1:11,6:17:15.05:241,15,0	1/1:5,0:5:3.01:36,3,0	./.	0/0:4,0:6:9.03:0,9,156	./.	0/0:5,0:5:3.01:0,3,52	1/1:4,12:17:39.13:590,39,0	1/1:4,14:18:33.11:530,33,0	1/1:3,0:7:8.60:112,9,0
chr10	93236910	.	G	GTGGGGCA	6235.34	PASS	AB=0.591;AC=15;AF=0.268;AN=56;BaseQRankSum=8.103;DP=581;FS=5.782;HRun=0;HaplotypeScore=174.0347;InbreedingCoeff=0.9515;MQ=55.42;MQ0=7;MQRankSum=-11.764;QD=62.98;ReadPosRankSum=0.601;VQSLOD=4.4213;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:15.10:0,15,1080	0/0:7,0:7:21.06:0,21,499	0/0:40,0:19:48.16:0,48,1098	0/0:42,0:32:72.20:0,72,1651	0/0:22,0:22:60.21:0,60,1582	0/0:6,0:6:12.04:0,12,315	0/0:6,0:6:13.91:0,14,394	0/0:35,0:34:99:0,99,2483	0/0:27,0:27:69.06:0,69,1765	0/0:38,0:38:99:0,111,2907	0/0:19,0:18:45.15:0,45,1175	1/1:3,7:11:33.11:1051,33,0	1/1:0,13:15:29.77:1141,30,0	1/1:3,8:11:26.76:1025,27,0	0/0:23,0:23:63.22:0,63,1629	0/0:20,0:19:57.20:0,57,1503	0/0:11,0:11:30.10:0,30,711	0/0:31,0:32:87.16:0,87,2121	0/0:15,0:13:33.11:0,33,840	0/0:28,0:28:78.27:0,78,2057	0/0:33,0:33:90.29:0,90,2263	1/1:2,12:14:22.87:835,23,0	1/1:4,8:12:14.72:518,15,0	0/1:4,8:13:0.20:0,0,0	1/1:4,7:11:24.08:772,24,0	0/0:36,0:36:99:0,99,2582	0/0:23,0:22:54.66:0,55,1366	1/1:4,6:12:30.10:894,30,0
chr10	93236961	.	ATG	A	225.34	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.412;DP=649;FS=0.000;HRun=0;HaplotypeScore=140.4100;InbreedingCoeff=0.8993;MQ=57.49;MQ0=8;MQRankSum=-0.888;QD=9.01;ReadPosRankSum=-3.971;VQSLOD=2.6903;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.39:0,72,1213	0/0:13,0:13:39.13:0,39,691	0/0:36,0:20:34.77:0,35,521	0/0:26,0:20:36.83:0,37,562	0/0:16,0:16:42.14:0,42,715	1/1:6,2:8:5.67:62,6,0	1/1:7,4:11:17.59:178,18,0	0/0:49,0:49:99:0,135,2120	0/0:33,0:33:87.30:0,87,1482	0/0:34,0:34:96.33:0,96,1684	0/0:18,0:18:48.16:0,48,821	0/0:15,0:15:21.02:0,21,332	0/0:18,0:18:24.08:0,24,424	0/0:10,0:10:15.05:0,15,265	0/0:32,0:32:87.30:0,87,1530	0/0:27,0:26:81.22:0,81,1339	1/1:5,1:6:11.71:114,12,0	0/0:28,0:28:72.25:0,72,1254	0/0:12,0:11:30.10:0,30,528	0/0:25,0:25:69.22:0,69,1195	0/0:58,0:58:99:0,169,2942	0/0:19,0:19:33.11:0,33,585	0/0:14,0:14:27.09:0,27,473	0/0:23,0:23:6.58:0,7,455	0/0:16,0:16:36.12:0,36,638	0/0:37,0:37:96.07:0,96,1638	0/0:26,0:26:66.23:0,66,1153	0/0:10,0:10:18.06:0,18,319
chr10	93237115	.	T	TCACACACACACACA	6609.99	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=0.293;DP=759;FS=0.575;HRun=0;HaplotypeScore=265.9435;InbreedingCoeff=0.7389;MQ=56.35;MQ0=6;MQRankSum=-9.068;QD=30.89;ReadPosRankSum=-4.022;VQSLOD=3.0389;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:76.56:77,0,1761	0/0:8,0:8:15.02:0,15,496	0/0:27,0:10:3.12:0,3,264	0/0:24,0:17:28.93:0,29,595	0/0:19,0:20:29.89:0,30,980	0/0:4,0:14:12.90:0,13,454	0/0:10,0:30:11.90:0,12,847	0/0:49,0:49:36.88:0,37,2092	0/0:36,0:36:66.18:0,66,2278	0/0:24,0:24:56.95:0,57,1767	0/0:21,0:22:45.12:0,45,1528	1/1:14,9:24:36.12:2336,36,0	1/1:19,9:30:12.04:602,12,0	1/1:18,17:39:27.09:1691,27,0	0/0:42,0:42:99:0,111,3663	0/0:42,0:43:99:0,102,3395	0/0:3,0:8:18.53:0,19,500	0/0:20,0:21:31.06:0,31,1466	0/1:16,0:16:2.88:3,0,645	0/0:24,0:25:57.20:0,57,2126	0/0:56,0:60:99:0,129,4081	1/1:4,9:16:6.02:404,6,0	1/1:10,1:20:11.75:748,12,0	1/1:5,17:23:3.01:202,3,0	1/1:9,1:18:9.03:547,9,0	0/0:39,0:39:77.07:0,77,3052	0/0:32,0:32:75.16:0,75,2378	0/0:20,0:21:48.16:0,48,1788
chr10	93237342	.	AG	A	20640.30	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.389;DP=681;FS=13.792;HRun=3;HaplotypeScore=80.3168;InbreedingCoeff=0.9998;MQ=80.04;MQ0=0;MQRankSum=-10.181;QD=32.61;ReadPosRankSum=7.046;VQSLOD=3.4186;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,42:44:99:1376,111,0	1/1:0,14:14:36.11:446,36,0	0/0:32,0:32:74.08:0,74,1186	0/0:16,0:16:44.69:0,45,582	1/1:0,30:30:87.27:1078,87,0	1/1:3,12:15:36.11:446,36,0	1/1:0,25:25:63.20:781,63,0	1/1:2,19:21:57.17:695,57,0	1/1:1,25:26:72.23:892,72,0	1/1:3,33:36:87.27:1079,87,0	1/1:2,16:18:48.15:588,48,0	1/1:1,28:29:78.24:962,78,0	1/1:1,18:19:48.15:595,48,0	1/1:0,23:23:66.21:818,66,0	1/1:0,26:26:72.23:893,72,0	1/1:0,20:20:51.16:632,51,0	1/1:1,24:25:66.21:818,66,0	1/1:0,19:19:48.15:595,48,0	1/1:2,24:26:69.22:853,69,0	1/1:3,28:31:78.24:962,78,0	1/1:0,39:39:99:1339,108,0	1/1:1,19:20:51.16:632,51,0	1/1:2,17:19:45.14:555,45,0	1/1:1,23:24:60.19:744,60,0	1/1:3,17:20:45.14:557,45,0	1/1:2,25:27:75.24:929,75,0	1/1:0,20:20:60.19:744,60,0	1/1:0,17:17:51.16:631,51,0
chr10	93237870	.	TG	T	679.27	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.841;DP=737;FS=11.192;HRun=3;HaplotypeScore=173.7644;InbreedingCoeff=0.9906;MQ=43.64;MQ0=11;MQRankSum=-1.737;QD=19.98;ReadPosRankSum=-1.408;VQSLOD=1.7042;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:45:99:0,99,1378	0/0:11,0:11:27.05:0,27,365	0/0:39,0:14:42.14:0,42,596	0/0:19,0:5:15.05:0,15,216	0/0:38,0:37:75.25:0,75,1078	1/1:1,16:14:39.12:469,39,0	1/1:6,11:10:27.08:331,27,0	0/0:33,0:22:66.18:0,66,927	0/0:24,0:21:42.14:0,42,595	0/0:32,0:29:78.23:0,78,1095	0/0:22,0:22:42.14:0,42,603	0/0:25,0:25:66.18:0,66,925	0/0:20,0:19:48.12:0,48,667	0/0:39,0:38:81.19:0,81,1111	0/0:24,0:24:60.16:0,60,839	0/0:21,0:21:54.14:0,54,754	0/0:31,0:29:75.17:0,75,1032	0/0:16,0:15:36.09:0,36,497	0/0:28,0:23:69.22:0,69,977	0/0:23,0:23:54.17:0,54,733	0/0:41,0:35:69.19:0,69,970	0/0:23,0:23:48.16:0,48,681	0/0:30,0:29:66.20:0,66,921	0/0:25,0:25:50.41:0,50,700	0/0:26,0:26:54.14:0,54,736	0/0:27,0:26:72.24:0,72,1036	0/0:24,0:21:54.05:0,54,706	0/0:14,0:14:33.11:0,33,475
chr10	93237978	.	CAG	C	690.70	PASS	AB=0.935;AC=27;AF=0.563;AN=48;BaseQRankSum=-0.795;DP=403;FS=5.116;HRun=0;HaplotypeScore=172.9062;InbreedingCoeff=0.2586;MQ=54.22;MQ0=8;MQRankSum=-0.558;QD=2.93;ReadPosRankSum=-0.881;VQSLOD=2.2321;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:0:0,0,0	0/0:9,0:9:2.50:0,2,9	0/0:20,0:15:0:0,0,0	0/0:21,0:13:0.47:0,0,1	1/1:19,2:21:6.01:62,6,0	./.	./.	0/0:16,0:15:1.25:0,1,3	1/1:8,7:14:9.02:95,9,0	1/1:12,2:16:13.09:93,13,0	./.	0/1:19,0:19:2.85:3,0,12	0/1:13,0:13:6.92:8,0,7	1/1:15,0:14:5.17:20,5,0	1/1:12,0:12:0.89:2,1,0	1/1:7,3:11:13.68:115,14,0	0/1:9,0:8:0.36:0,0,13	1/1:7,6:10:15.92:160,16,0	1/1:12,1:12:3.01:32,3,0	1/1:14,4:19:2.54:58,3,0	0/0:7,2:9:1.82:0,2,5	0/0:14,0:13:2.99:0,3,23	0/0:18,0:18:3:0,3,25	0/1:13,2:15:12.01:39,0,12	1/1:19,0:19:2.34:8,2,0	./.	0/1:14,3:19:7.51:74,0,8	1/1:4,0:6:7.08:44,7,0
chr10	93237990	.	G	GAC	301.83	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=3.747;DP=387;FS=14.438;HRun=0;HaplotypeScore=131.8934;InbreedingCoeff=0.7047;MQ=44.82;MQ0=34;MQRankSum=-2.014;QD=3.39;ReadPosRankSum=0.946;VQSLOD=2.0858;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,4:15:11.83:81,12,0	1/1:5,3:8:8.88:83,9,0	0/0:16,0:11:20.27:0,20,152	0/0:18,0:10:7.32:0,7,92	0/0:11,0:10:8.99:0,9,74	1/1:7,1:8:14.76:95,15,0	1/1:11,0:8:5.87:35,6,0	0/0:18,0:16:44.81:0,45,367	0/0:15,0:13:17.83:0,18,129	0/0:13,0:13:35.64:0,36,271	0/0:8,0:8:3:0,3,25	0/0:19,0:19:31.46:0,31,203	0/0:14,0:13:15.05:0,15,170	0/0:14,0:12:11.07:0,11,73	1/1:9,4:11:5.91:63,6,0	0/0:13,0:12:23.82:0,24,180	1/1:6,3:7:12.76:107,13,0	0/0:17,0:9:23.84:0,24,180	0/0:14,0:11:15.99:0,16,198	0/0:13,0:10:7.42:0,7,72	0/0:13,0:8:4.13:0,4,57	0/0:15,0:14:14.98:0,15,124	0/0:15,0:15:14.98:0,15,124	0/1:21,0:17:5.34:5,0,20	0/0:21,0:21:14.39:0,14,100	0/0:10,0:7:17.81:0,18,130	0/0:16,0:16:4.80:0,5,160	0/0:5,0:5:11.29:0,11,66
chr10	93238008	.	G	GAC	62.01	PASS	AB=0.975;AC=11;AF=0.196;AN=56;BaseQRankSum=0.379;DP=441;FS=3.541;HRun=0;HaplotypeScore=112.2059;InbreedingCoeff=-0.0404;MQ=32.23;MQ0=74;MQRankSum=-0.778;QD=0.53;ReadPosRankSum=2.375;VQSLOD=2.1853;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:11:8.15:0,8,35	0/1:5,0:5:7.12:7,0,9	1/1:5,0:3:1.58:5,2,0	0/1:10,0:6:7.29:7,0,15	0/0:14,1:13:8.99:0,9,73	0/0:11,0:9:8.25:0,8,43	0/0:11,0:5:5.67:0,6,27	0/0:22,0:19:26.48:0,26,292	0/0:17,0:12:14.74:0,15,107	0/0:21,0:18:41.58:0,42,283	0/0:11,0:10:3:0,3,25	0/0:23,0:18:20.36:0,20,123	0/0:14,0:10:2.40:0,2,94	0/0:14,0:11:8.07:0,8,48	1/1:11,0:9:2.74:12,3,0	0/1:20,0:17:18.82:19,0,89	0/1:17,0:9:5.75:6,0,19	0/0:20,0:8:0.96:0,1,122	0/0:10,0:5:11.70:0,12,74	0/1:17,1:14:41.07:41,0,53	0/1:13,1:6:18.91:47,0,19	0/0:20,0:17:11.98:0,12,99	0/0:19,0:17:3:0,3,25	0/0:30,0:22:1.60:0,2,66	0/0:23,0:22:8.31:0,8,56	0/0:13,0:9:6.72:0,7,144	0/1:17,1:15:43.88:44,0,107	0/0:9,0:6:5.94:0,6,27
chr10	93238016	.	G	GAGAC	1387.95	PASS	AB=0.987;AC=25;AF=0.481;AN=52;BaseQRankSum=0.040;DP=438;FS=1.449;HRun=0;HaplotypeScore=108.7765;InbreedingCoeff=0.0150;MQ=31.64;MQ0=78;MQRankSum=3.269;QD=4.27;ReadPosRankSum=3.316;VQSLOD=2.0788;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:9:2.96:0,3,22	1/1:5,0:5:2.88:15,3,0	0/0:3,0:1:0.47:0,0,1	0/0:4,0:1:1.55:0,2,4	0/0:17,0:15:1.87:0,2,23	./.	./.	0/0:17,0:13:32.17:0,32,198	0/1:18,0:12:4.26:4,0,35	0/1:20,0:17:90.67:91,0,161	0/0:12,0:11:2.22:0,2,7	0/1:23,1:19:33.65:200,0,34	0/1:14,1:11:4.49:149,0,4	1/1:16,0:13:14.38:174,14,0	1/1:10,0:8:2.84:14,3,0	0/1:18,0:15:9.64:59,0,10	0/1:16,0:7:4.01:4,0,39	0/1:20,0:9:7.16:7,0,26	0/0:11,0:7:7.12:0,7,70	0/1:21,0:17:2.30:15,0,2	1/1:14,0:5:2.86:20,3,0	1/1:21,0:18:11.84:114,12,0	1/1:21,0:19:2.78:23,3,0	1/1:29,3:25:22.09:443,22,0	0/1:22,0:22:37.16:71,0,37	0/0:11,0:7:17.56:0,18,109	0/1:22,0:18:42.28:71,0,42	0/1:8,0:5:9.82:63,0,10
chr10	93238028	.	GAGAC	G	654.31	PASS	AB=0.988;AC=16;AF=0.348;AN=46;BaseQRankSum=1.216;DP=459;FS=1.774;HRun=0;HaplotypeScore=104.4605;InbreedingCoeff=-0.2483;MQ=30.60;MQ0=87;MQRankSum=0.173;QD=2.45;ReadPosRankSum=1.581;VQSLOD=1.9203;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:5,0:5:0.38:0,0,0	./.	./.	0/0:21,0:19:3.44:0,3,21	0/1:6,0:4:0:0,0,0	./.	0/0:31,0:24:38.98:0,39,246	0/0:18,0:12:13.23:0,13,83	0/1:26,0:22:57.56:58,0,98	./.	0/1:20,2:17:68.93:91,0,69	0/1:12,0:8:33.22:106,0,33	0/1:17,1:15:34.17:96,0,34	0/1:11,0:9:0:0,0,0	0/1:16,0:13:28.82:29,0,60	0/1:16,0:7:12.94:13,0,13	0/1:23,0:12:5.53:6,0,75	0/1:15,0:11:9.20:9,0,12	0/0:24,0:20:10.06:0,10,52	0/0:19,0:7:0.89:0,1,2	0/1:23,0:20:25.41:25,0,38	0/0:25,0:23:5.98:0,6,48	0/1:33,1:26:99:200,0,150	1/1:19,1:19:5.74:76,6,0	0/0:14,0:7:5.32:0,5,37	0/1:17,0:13:26.44:26,0,29	0/1:8,0:5:7.56:45,0,8
chr10	93238030	.	GAC	G	364.27	PASS	AB=0.991;AC=21;AF=0.420;AN=50;BaseQRankSum=5.059;DP=456;FS=7.190;HRun=0;HaplotypeScore=96.7558;InbreedingCoeff=-0.2096;MQ=30.38;MQ0=88;MQRankSum=3.103;QD=1.09;ReadPosRankSum=2.154;VQSLOD=1.2004;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:4:0:0,0,0	0/0:5,0:5:2.62:0,3,12	./.	./.	1/1:20,0:18:5.23:47,5,0	0/0:6,0:4:0:0,0,0	0/1:12,0:3:0:0,0,0	0/0:30,0:23:63.83:0,64,319	0/1:18,0:12:15.46:20,0,15	0/1:25,0:21:25.44:25,0,154	./.	0/1:19,2:16:18.34:18,0,69	0/1:11,0:7:34.74:40,0,35	0/1:18,0:15:34.08:39,0,34	0/0:10,0:8:2.04:0,2,6	0/1:16,0:13:7.95:37,0,8	0/1:16,0:7:2.21:2,0,21	1/1:22,1:12:1.97:81,2,0	0/1:15,0:11:8.71:9,0,29	0/1:24,0:20:21.51:22,0,36	0/0:19,0:7:2.70:0,3,27	0/1:22,1:20:16.61:17,0,41	0/0:24,1:23:5.98:0,6,48	0/1:34,0:26:49.90:50,0,150	1/1:20,0:19:5.83:45,6,0	0/0:16,0:8:22.13:0,22,110	0/1:17,0:13:15.39:35,0,15	0/1:8,0:5:3.85:10,0,4
chr10	93238064	.	C	CAG	306.06	PASS	AB=0.965;AC=20;AF=0.417;AN=48;BaseQRankSum=7.205;DP=432;FS=3.895;HRun=0;HaplotypeScore=85.4692;InbreedingCoeff=0.2976;MQ=31.15;MQ0=91;MQRankSum=-5.533;QD=1.60;ReadPosRankSum=0.657;VQSLOD=1.6770;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:3:0.27:0,0,0	1/1:5,0:4:2.90:16,3,0	./.	./.	./.	0/1:7,0:5:0.13:0,0,0	0/0:10,0:3:0:0,0,1	0/0:27,0:18:29.94:0,30,294	0/1:17,0:11:13.28:13,0,26	0/1:21,0:17:71.89:72,0,120	./.	0/0:21,0:16:23.82:0,24,319	0/0:16,0:12:30.09:0,30,383	0/0:15,0:12:23.80:0,24,318	1/1:11,0:9:5.11:27,5,0	1/1:15,0:12:4.75:23,5,0	0/1:12,0:4:2.15:2,0,34	0/1:20,2:12:28.67:107,0,29	1/1:12,0:5:10.36:49,10,0	0/0:22,0:18:2.45:0,2,14	0/1:16,3:8:0:1,0,0	0/0:26,0:25:21.07:0,21,279	0/0:23,0:24:23.87:0,24,254	0/0:31,0:23:37.19:0,37,464	0/0:17,0:16:13.16:0,13,161	0/1:13,1:8:43.71:94,0,44	1/1:11,0:7:5.86:36,6,0	0/1:12,0:9:3.38:6,0,3
chr10	93238066	.	GAGAGAC	G	1321.05	PASS	AB=0.930;AC=22;AF=0.440;AN=50;BaseQRankSum=1.030;DP=428;FS=4.640;HRun=0;HaplotypeScore=93.0460;InbreedingCoeff=0.5531;MQ=31.20;MQ0=90;MQRankSum=-7.380;QD=6.17;ReadPosRankSum=-1.796;VQSLOD=1.0801;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:4:0.05:0,0,1	0/0:6,0:5:2.96:0,3,19	./.	./.	1/1:20,2:16:3.01:34,3,0	0/0:7,0:5:0:0,0,1	./.	1/1:25,0:16:18.23:45,18,0	1/1:15,1:10:1.65:49,2,0	1/1:20,1:17:28.22:379,28,0	0/0:9,2:10:2.04:0,2,6	0/0:21,0:16:27.04:0,27,435	0/0:16,0:12:27.98:0,28,419	0/0:16,0:13:27.09:0,27,415	0/0:11,0:9:5.69:0,6,31	1/1:12,3:12:9.64:146,10,0	0/1:12,0:4:24.19:24,0,52	0/1:18,3:11:4.34:201,0,4	1/1:10,1:4:9.92:170,10,0	0/1:18,4:18:1.43:12,0,1	0/0:19,0:8:0:0,0,0	0/0:25,0:24:21.07:0,21,338	0/0:23,0:23:24.08:0,24,372	0/0:32,0:24:42.14:0,42,692	0/0:17,0:16:12.04:0,12,165	1/1:14,0:8:15.83:223,16,0	1/1:7,4:7:5.89:103,6,0	1/1:11,0:8:8.94:98,9,0
chr10	93238072	.	C	CAG	1348.05	PASS	AB=0.869;AC=30;AF=0.577;AN=52;BaseQRankSum=6.218;DP=421;FS=6.112;HRun=0;HaplotypeScore=85.2718;InbreedingCoeff=0.6075;MQ=36.62;MQ0=84;MQRankSum=-8.156;QD=5.84;ReadPosRankSum=-2.529;VQSLOD=1.9873;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:6:2.78:12,3,0	1/1:6,0:5:2.86:16,3,0	./.	0/0:7,0:3:0.47:0,0,1	1/1:17,9:20:3.01:34,3,0	1/1:7,0:5:0.47:1,0,0	0/0:10,0:3:0:0,0,0	1/1:21,0:11:2.60:10,3,0	1/1:4,8:9:3:53,3,0	1/1:14,5:15:25.23:347,25,0	./.	0/0:20,0:15:29.77:0,30,373	0/0:16,0:12:27.56:0,28,371	0/0:16,0:13:26.81:0,27,368	1/1:11,0:9:8.16:40,8,0	1/1:8,4:10:12.61:129,13,0	0/0:11,0:4:3.90:0,4,43	0/1:17,3:11:5.43:200,0,5	1/1:7,2:4:9.03:152,9,0	1/1:11,8:16:2.92:17,3,0	0/1:16,3:8:0.04:0,0,0	0/0:25,0:24:27.07:0,27,346	0/0:20,0:20:27.07:0,27,347	0/0:33,0:25:45:0,45,611	0/0:17,0:17:20.91:0,21,240	1/1:9,5:9:18.81:272,19,0	1/1:9,2:7:9.03:140,9,0	1/1:7,2:6:6.02:91,6,0
chr10	93238112	.	CAG	C	3614.46	PASS	AB=1.000;AC=29;AF=0.537;AN=54;BaseQRankSum=7.590;DP=544;FS=0.959;HRun=0;HaplotypeScore=144.5427;InbreedingCoeff=0.8537;MQ=65.88;MQ0=23;MQRankSum=-7.973;QD=16.58;ReadPosRankSum=0.331;VQSLOD=3.2779;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:12:8.41:0,8,73	0/0:13,0:13:5.53:0,6,51	0/0:62,0:27:64.76:0,65,874	0/0:92,0:41:68.44:0,68,867	1/1:3,19:19:14.71:166,15,0	1/1:7,0:7:0.70:2,1,0	0/0:11,0:10:9.11:0,9,38	1/1:1,18:16:30.10:399,30,0	1/1:0,10:9:13.92:94,14,0	1/1:2,16:18:48.13:628,48,0	1/1:3,16:18:12.45:196,12,0	0/0:14,0:14:30.08:0,30,529	0/0:18,0:18:48.09:0,48,742	0/0:13,0:13:24.06:0,24,430	0/1:12,0:12:3.23:3,0,22	1/1:3,8:11:15.86:99,16,0	1/1:8,0:5:2.04:6,2,0	1/1:4,12:13:34.96:390,35,0	1/1:4,10:10:21.07:287,21,0	1/1:1,23:24:22.71:273,23,0	./.	0/0:17,0:17:45.14:0,45,792	0/0:24,0:23:66.15:0,66,1138	0/0:23,0:23:51.17:0,51,914	0/0:18,0:17:48.15:0,48,860	1/1:1,11:12:33.10:413,33,0	1/1:2,14:16:24.07:290,24,0	1/1:0,10:10:30.09:368,30,0
chr10	93238123	.	C	CAGACAGAG	3943.84	PASS	AB=0.995;AC=30;AF=0.536;AN=56;BaseQRankSum=11.372;DP=589;FS=6.153;HRun=0;HaplotypeScore=193.2764;InbreedingCoeff=0.3604;MQ=68.48;MQ0=14;MQRankSum=-10.712;QD=12.85;ReadPosRankSum=1.758;VQSLOD=2.3908;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:6.02:214,6,0	1/1:13,0:13:24.08:692,24,0	0/0:63,0:38:49.49:0,49,1062	0/0:91,0:47:64.74:0,65,878	0/1:23,0:20:0.75:132,0,1	1/1:1,7:12:8.56:235,9,0	1/1:0,10:11:6.02:156,6,0	0/1:24,0:22:49.23:161,0,49	0/1:12,0:11:2.88:93,0,3	0/1:20,0:20:34.23:245,0,34	0/1:23,0:23:76.91:126,0,77	0/0:14,0:14:26.34:0,26,617	0/0:18,0:18:48.05:0,48,963	0/0:11,0:11:24.04:0,24,448	1/1:13,0:13:18.06:472,18,0	1/1:9,0:9:17.79:158,18,0	1/1:10,0:9:5:26,5,0	0/1:16,0:13:31.71:140,0,32	1/1:17,0:15:26.35:224,26,0	0/1:30,0:29:22.68:253,0,23	1/1:10,0:7:1.25:3,1,0	0/0:18,0:18:36.11:0,36,923	0/0:23,0:23:63.19:0,63,1595	0/0:21,0:21:47.80:0,48,1232	0/0:19,0:18:54.10:0,54,1338	1/1:15,0:15:0.58:252,1,0	1/1:17,0:17:6.96:147,7,0	0/1:14,0:14:19.17:215,0,19
chr10	93238127	.	C	CAGAGAGAG	4662.49	PASS	AB=0.652;AC=37;AF=0.661;AN=56;BaseQRankSum=10.373;DP=593;FS=4.668;HRun=0;HaplotypeScore=189.5342;InbreedingCoeff=0.8347;MQ=70.40;MQ0=11;MQRankSum=-9.928;QD=14.43;ReadPosRankSum=0.532;VQSLOD=3.9654;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:26:8.96:266,9,0	1/1:0,13:14:24.08:843,24,0	0/0:59,0:40:50.78:0,51,1485	0/0:81,0:43:62.14:0,62,1060	1/1:13,0:20:23.88:224,24,0	1/1:12,0:12:8.56:182,9,0	1/1:11,0:11:6.02:122,6,0	1/1:23,0:25:19.32:127,19,0	1/1:7,0:11:15.40:156,15,0	1/1:9,0:20:39.95:308,40,0	1/1:14,0:24:8.21:181,8,0	0/0:15,0:15:26.36:0,26,696	0/0:19,0:19:51.16:0,51,1178	0/0:10,0:10:27.06:0,27,560	1/1:3,9:13:21:596,21,0	1/1:4,0:11:23.89:273,24,0	1/1:2,8:9:5.98:57,6,0	0/1:7,0:13:13.35:122,0,13	1/1:11,0:14:23.64:178,24,0	1/1:11,0:28:33.29:331,33,0	1/1:9,0:9:3:25,3,0	0/0:18,0:18:42.12:0,42,1033	0/0:23,0:23:66.21:0,66,1734	0/0:21,0:21:47.82:0,48,1320	0/0:18,0:18:54.18:0,54,1441	1/1:7,0:16:37.67:270,38,0	1/1:8,0:17:23.76:165,24,0	1/1:4,0:14:30.22:237,30,0
chr10	93238830	.	CA	C	8159.43	PASS	AB=0.577;AC=35;AF=0.625;AN=56;BaseQRankSum=9.605;DP=572;FS=9.650;HRun=10;HaplotypeScore=65.1103;InbreedingCoeff=0.9084;MQ=70.64;MQ0=1;MQRankSum=-2.634;QD=21.70;ReadPosRankSum=2.989;VQSLOD=5.5966;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,48:53:99:1093,101,0	1/1:2,10:12:23.99:208,24,0	0/0:18,1:18:0.76:0,1,190	0/0:21,0:18:27.40:0,27,301	1/1:2,31:33:89.96:781,90,0	1/1:1,19:20:47.99:417,48,0	1/1:2,18:20:47.98:417,48,0	1/1:2,21:23:62.95:538,63,0	1/1:1,16:17:44.99:391,45,0	1/1:2,25:27:71.97:625,72,0	1/1:1,12:13:32.12:285,32,0	0/0:15,0:16:38.91:0,39,395	0/0:25,1:26:43.12:0,43,697	0/0:14,0:14:33.08:0,33,358	1/1:2,19:21:20.81:410,21,0	0/1:4,11:15:3.23:204,0,3	0/0:23,0:23:60.14:0,60,654	1/1:1,5:6:15:130,15,0	1/1:2,12:14:35.99:311,36,0	1/1:3,15:18:44.99:391,45,0	1/1:1,23:24:65.99:573,66,0	0/0:19,0:19:54.14:0,54,590	0/0:18,0:18:48.08:0,48,510	0/0:22,0:22:57.14:0,57,623	0/0:18,0:18:36.10:0,36,398	1/1:2,24:26:68.97:599,69,0	1/1:1,24:26:68.01:579,68,0	1/1:0,8:8:24:208,24,0
chr10	93240303	.	GCA	G	523.72	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.298;DP=657;FS=0.000;HRun=0;HaplotypeScore=90.9480;InbreedingCoeff=0.9839;MQ=86.42;MQ0=0;MQRankSum=-3.394;QD=26.19;ReadPosRankSum=1.385;VQSLOD=4.5930;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,2664	0/0:5,0:5:15.05:0,15,279	0/0:29,0:29:78.27:0,78,1458	0/0:28,0:28:78.21:0,78,1341	0/0:27,0:27:78.25:0,78,1415	0/0:16,0:16:48.16:0,48,899	0/0:27,0:27:78.25:0,78,1430	0/0:28,0:28:78.27:0,78,1443	0/0:28,0:28:84.26:0,84,1504	0/0:22,0:22:66.23:0,66,1224	0/0:19,0:19:48.16:0,48,887	0/0:15,0:15:41.91:0,42,786	0/0:21,0:21:60.21:0,60,1112	0/0:19,0:19:57.20:0,57,1060	0/0:24,0:24:72.25:0,72,1347	0/0:28,0:28:78.27:0,78,1444	0/0:27,0:27:81.28:0,81,1505	0/0:24,0:24:63.22:0,63,1180	0/0:16,0:16:48.16:0,48,899	0/0:21,0:21:60.21:0,60,1105	0/0:32,0:32:96.33:0,96,1761	0/0:18,0:18:51.17:0,51,955	0/0:13,0:13:33.11:0,33,609	0/0:39,0:39:99:0,111,2017	0/0:11,0:11:33.11:0,33,606	0/0:25,0:25:75.26:0,75,1405	0/0:26,0:26:75.24:0,75,1364	1/1:0,20:20:42.14:619,42,0
chr10	93240902	.	G	GT	126.92	PASS	AC=10;AF=0.238;AN=42;BaseQRankSum=4.648;DP=284;FS=7.785;HRun=0;HaplotypeScore=37.6044;InbreedingCoeff=0.7539;MQ=68.27;MQ0=8;MQRankSum=1.525;QD=14.10;ReadPosRankSum=-3.823;VQSLOD=2.6973;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:93.27:0,93,1255	0/0:8,0:8:24.03:0,24,297	0/0:8,0:7:12.69:0,13,183	0/0:12,0:8:19.99:0,20,183	./.	0/0:20,0:20:60.14:0,60,799	0/0:33,0:29:87.25:0,87,1193	1/1:2,0:1:3:26,3,0	1/1:0,2:2:3.01:44,3,0	1/1:0,1:1:3.01:43,3,0	./.	0/0:14,0:13:36.02:0,36,443	0/0:13,0:12:33.07:0,33,439	0/0:12,0:12:33.11:0,33,461	0/0:22,0:21:63.21:0,63,881	./.	0/0:21,0:20:60.20:0,60,837	0/0:2,0:2:6.02:0,6,73	1/1:1,0:1:3.01:48,3,0	./.	./.	0/0:20,0:20:60.20:0,60,838	0/0:10,0:10:27.09:0,27,377	0/0:23,0:23:63.19:0,63,849	0/0:11,0:11:27.02:0,27,353	1/1:0,3:3:9:94,9,0	./.	./.
chr10	93240976	.	G	GA	240.11	PASS	AB=0.969;AC=6;AF=0.188;AN=32;BaseQRankSum=3.155;DP=249;FS=3.587;HRun=11;HaplotypeScore=77.9100;InbreedingCoeff=0.5438;MQ=52.00;MQ0=16;MQRankSum=-4.194;QD=3.75;ReadPosRankSum=-2.357;VQSLOD=0.2977;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:25,8:31:10.57:238,11,0	0/1:4,0:4:0:0,0,0	0/0:10,0:2:5.21:0,5,30	0/0:12,0:7:0.64:0,1,30	./.	0/0:16,0:17:17.88:0,18,138	0/0:20,0:15:23.85:0,24,183	./.	./.	./.	./.	0/0:13,0:12:17.87:0,18,137	0/1:14,1:14:3.55:4,0,159	0/0:12,0:12:29.89:0,30,232	1/1:9,3:11:11.95:101,12,0	./.	0/0:32,1:33:15.31:0,15,371	0/0:2,0:2:5.98:0,6,46	./.	./.	./.	0/0:12,0:11:11.92:0,12,93	0/0:8,0:8:5.92:0,6,46	0/0:22,0:25:57.86:0,58,429	0/0:9,0:9:11.94:0,12,93	./.	./.	./.
chr10	93240994	.	AAAAAT	A	1064.28	PASS	AB=1.000;AC=5;AF=0.156;AN=32;BaseQRankSum=2.229;DP=256;FS=10.491;HRun=0;HaplotypeScore=94.1379;InbreedingCoeff=0.6302;MQ=59.29;MQ0=6;MQRankSum=-6.614;QD=22.17;ReadPosRankSum=-1.384;VQSLOD=2.3180;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:5.08:0,5,565	0/0:2,0:2:6.01:0,6,65	0/0:20,0:7:21.07:0,21,455	0/0:19,0:12:20.78:0,21,376	./.	1/1:2,13:15:24.08:466,24,0	1/1:5,18:20:39.05:701,39,0	./.	./.	./.	./.	0/0:7,0:7:18.06:0,18,513	0/0:14,0:14:24.06:0,24,642	0/0:13,0:13:36.12:0,36,1003	0/1:10,0:10:10.96:11,0,118	./.	0/0:28,0:28:78.27:0,78,2225	0/0:1,0:1:2.97:0,3,20	./.	./.	./.	0/0:11,0:11:21.07:0,21,600	0/0:14,0:14:38.71:0,39,981	0/0:29,0:29:84.29:0,84,2372	0/0:15,0:15:32.38:0,32,940	./.	./.	./.
chr10	93241004	.	A	AAT	819.68	PASS	AC=6;AF=0.188;AN=32;BaseQRankSum=3.450;DP=273;FS=15.468;HRun=0;HaplotypeScore=82.8198;InbreedingCoeff=0.8721;MQ=65.13;MQ0=3;MQRankSum=-3.669;QD=17.08;ReadPosRankSum=1.759;VQSLOD=2.6432;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,21:32:30.86:803,31,0	1/1:0,0:3:5.98:49,6,0	0/0:22,0:10:29.91:0,30,348	0/0:20,0:13:25.75:0,26,268	./.	0/0:16,0:16:26.07:0,26,238	0/0:27,0:24:41.80:0,42,370	./.	./.	./.	./.	0/0:6,0:6:18.06:0,18,268	0/0:9,0:9:24.05:0,24,334	0/0:14,0:14:36.09:0,36,507	1/1:0,0:12:9.80:84,10,0	0/0:1,0:1:1.25:0,1,3	0/0:32,0:32:90.23:0,90,1277	./.	./.	./.	./.	0/0:11,0:11:27.04:0,27,359	0/0:15,0:15:42.14:0,42,617	0/0:32,0:32:96.29:0,96,1373	0/0:18,0:18:42.13:0,42,607	./.	./.	./.
chr10	93241120	.	C	CA	15703.39	PASS	AB=0.800;AC=55;AF=0.982;AN=56;BaseQRankSum=-1.928;DP=472;FS=6.328;HRun=3;HaplotypeScore=123.0183;InbreedingCoeff=-0.0251;MQ=57.21;MQ0=0;MQRankSum=-2.399;QD=33.27;ReadPosRankSum=1.946;VQSLOD=3.9900;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:27:69.09:915,69,0	1/1:2,4:6:15.01:188,15,0	1/1:4,1:5:8.06:83,8,0	0/1:6,2:8:39.84:104,0,40	1/1:0,9:9:24.08:335,24,0	1/1:0,27:27:69.23:962,69,0	1/1:1,28:29:72.24:1001,72,0	1/1:1,16:18:53.98:706,54,0	1/1:3,13:16:32.98:460,33,0	1/1:4,21:25:54.16:730,54,0	1/1:0,9:9:27.09:377,27,0	1/1:2,7:9:15.05:209,15,0	1/1:0,16:16:42.11:559,42,0	1/1:3,13:16:39.13:543,39,0	1/1:0,15:15:45.14:606,45,0	1/1:1,12:13:36.05:474,36,0	1/1:1,28:29:75.25:1044,75,0	1/1:1,16:17:45.15:629,45,0	1/1:0,16:16:48.02:623,48,0	1/1:1,17:18:45.06:579,45,0	1/1:2,27:29:57.15:775,57,0	1/1:2,15:17:39.13:544,39,0	1/1:0,3:3:9.03:126,9,0	1/1:2,28:30:69.23:957,69,0	1/1:1,14:15:33.07:440,33,0	1/1:3,17:20:51.13:688,51,0	1/1:3,22:25:66.15:879,66,0	1/1:0,4:4:12.04:168,12,0
chr10	93241255	.	C	CCAT	953.11	PASS	AB=0.901;AC=17;AF=0.304;AN=56;BaseQRankSum=2.543;DP=435;FS=22.132;HRun=0;HaplotypeScore=145.0176;InbreedingCoeff=0.0765;MQ=36.27;MQ0=5;MQRankSum=-3.884;QD=4.91;ReadPosRankSum=0.942;VQSLOD=0.7883;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:12:7.56:0,8,98	0/0:8,0:8:15.26:0,15,128	0/0:28,0:13:17.93:0,18,204	0/1:17,0:7:0.06:0,0,146	0/0:7,0:5:2.57:0,3,30	0/0:23,0:23:20.41:0,20,215	0/0:40,0:40:15.08:0,15,524	0/1:16,2:15:22.08:83,0,22	1/1:15,3:18:11.66:144,12,0	0/1:19,1:17:53.28:207,0,53	0/1:5,1:6:0:1,0,0	0/0:9,0:9:14.19:0,14,75	0/0:24,0:24:41.76:0,42,333	0/1:25,0:25:3.79:4,0,220	0/0:25,0:25:44.44:0,44,366	0/1:11,1:12:7.76:45,0,8	0/0:12,0:12:14.21:0,14,90	0/0:3,0:3:0:0,0,0	0/1:12,1:13:41.61:114,0,42	1/1:7,2:9:1.24:22,1,0	1/1:3,3:6:3:25,3,0	0/0:12,0:12:15.09:0,15,108	0/0:13,0:13:7.50:0,7,89	0/1:17,0:17:0.82:1,0,90	0/0:20,0:17:15.47:0,15,93	0/1:14,4:15:22.30:239,0,22	0/1:11,2:13:36.86:153,0,37	0/1:1,1:2:14.48:60,0,14
chr10	93241262	.	C	CATT	944.81	PASS	AB=0.920;AC=23;AF=0.426;AN=54;BaseQRankSum=6.525;DP=360;FS=30.634;HRun=0;HaplotypeScore=144.9239;InbreedingCoeff=-0.3591;MQ=35.99;MQ0=5;MQRankSum=-4.110;QD=3.32;ReadPosRankSum=1.566;VQSLOD=1.2657;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:10:17.97:0,18,193	0/1:8,0:8:19.16:19,0,143	0/1:16,0:8:9.81:10,0,196	0/0:12,0:4:9.02:0,9,131	0/0:6,0:4:6:0,6,56	0/1:20,3:23:3.17:3,0,222	0/1:32,1:33:1.92:2,0,591	0/1:10,1:8:29.48:45,0,29	0/1:13,2:15:33.53:59,0,34	0/1:15,2:14:54.62:185,0,55	1/1:5,0:5:1.97:5,2,0	0/0:9,0:9:7.71:0,8,154	0/1:22,1:23:62.46:62,0,376	0/1:21,4:25:99:107,0,216	0/1:23,0:23:29.31:29,0,381	0/1:10,1:11:42.03:139,0,42	0/0:9,0:9:13.96:0,14,160	1/1:3,0:3:6:59,6,0	0/0:10,0:10:6.42:0,6,83	0/1:4,0:4:10.12:10,0,25	./.	0/1:8,3:11:9.28:9,0,123	0/0:9,1:10:10.59:0,11,149	0/1:14,3:17:18.72:19,0,97	0/1:14,0:11:9.88:10,0,29	0/1:12,0:10:25.84:81,0,26	0/1:8,4:13:65.74:235,0,66	1/1:1,0:1:2.04:6,2,0
chr10	93266425	.	CTCTCTG	C	1789.58	PASS	AB=0.917;AC=28;AF=0.636;AN=44;BaseQRankSum=-2.870;DP=576;FS=1.571;HRun=0;HaplotypeScore=172.2583;InbreedingCoeff=0.4022;MQ=66.95;MQ0=7;MQRankSum=2.330;QD=5.26;ReadPosRankSum=0.515;VQSLOD=2.4522;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:8.42:46,8,0	1/1:13,0:13:15:148,15,0	./.	./.	1/1:17,0:17:0.47:1,0,0	1/1:26,0:26:0.94:2,1,0	1/1:25,0:23:2.92:17,3,0	0/0:27,0:27:0.47:0,0,1	1/1:17,0:17:4.41:15,4,0	0/1:16,0:16:3.48:32,0,3	./.	./.	1/1:14,0:14:9.03:180,9,0	./.	0/0:20,0:20:2.98:0,3,21	0/0:13,0:13:1.75:0,2,22	1/1:31,0:30:11.06:93,11,0	0/0:14,0:11:2.92:0,3,17	0/0:11,0:11:3.59:0,4,10	0/1:16,0:16:0:0,0,0	./.	0/1:14,14:28:0:0,0,0	1/1:14,0:14:9.03:179,9,0	1/1:26,0:26:33.10:591,33,0	1/1:20,0:19:30.08:475,30,0	0/1:27,0:24:17.71:106,0,18	1/1:22,0:21:5.30:28,5,0	0/0:13,0:13:7.39:0,7,80
chr10	93266431	.	G	GTCTC	2931.89	PASS	AB=0.857;AC=23;AF=0.411;AN=56;BaseQRankSum=6.690;DP=563;FS=10.223;HRun=0;HaplotypeScore=149.4208;InbreedingCoeff=0.7703;MQ=60.76;MQ0=16;MQRankSum=-8.499;QD=14.88;ReadPosRankSum=-1.686;VQSLOD=2.4631;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:27.07:0,27,443	0/0:13,0:13:33.02:0,33,493	0/0:24,0:21:47.71:0,48,805	0/0:26,0:22:40.37:0,40,669	1/1:3,11:15:1.82:5,2,0	0/0:30,0:29:54.13:0,54,881	0/0:24,0:21:45.15:0,45,790	1/1:25,0:25:31.82:311,32,0	1/1:14,2:17:20.99:308,21,0	1/1:16,1:14:36.70:578,37,0	1/1:11,0:10:2.51:24,3,0	0/0:31,0:31:27.08:0,27,452	0/0:14,0:14:26.96:0,27,518	0/0:15,0:15:18.04:0,18,291	0/0:21,0:21:27.08:0,27,453	1/1:11,0:11:12.04:196,12,0	0/0:31,0:30:33.82:0,34,884	1/1:11,0:8:8.99:104,9,0	0/1:10,2:12:19.73:230,0,20	1/1:14,1:15:3.52:134,4,0	0/0:18,0:15:2.87:0,3,27	0/0:29,0:28:27.07:0,27,433	0/0:14,0:14:2.11:0,2,371	0/0:28,0:28:54.18:0,54,989	0/0:22,0:21:31.96:0,32,873	1/1:27,0:24:38.42:593,38,0	1/1:22,1:21:35.88:432,36,0	1/1:13,0:12:7.45:219,7,0
chr10	93266435	.	CTG	C	2403.61	PASS	AB=0.924;AC=26;AF=0.464;AN=56;BaseQRankSum=8.528;DP=559;FS=14.204;HRun=0;HaplotypeScore=130.4116;InbreedingCoeff=0.5124;MQ=55.85;MQ0=24;MQRankSum=-6.944;QD=8.84;ReadPosRankSum=0.536;VQSLOD=2.5972;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:26.56:0,27,400	0/0:15,0:15:16.54:0,17,416	0/0:22,0:19:47.24:0,47,808	0/0:23,0:19:40.37:0,40,669	1/1:12,1:13:2.04:6,2,0	0/0:31,0:30:54.13:0,54,871	0/0:24,1:22:45.12:0,45,769	1/1:16,4:20:31.61:310,32,0	1/1:6,10:16:19.18:183,19,0	1/1:11,8:14:36.65:435,37,0	1/1:6,4:9:2.51:24,3,0	0/0:27,0:27:27.08:0,27,452	0/1:15,0:15:8.80:9,0,398	0/0:15,0:14:18.04:0,18,291	0/0:23,0:23:26.95:0,27,457	1/1:1,10:11:12.04:159,12,0	0/0:30,1:30:16.36:0,16,838	1/1:5,7:7:8.99:104,9,0	0/1:10,2:12:19.73:104,0,20	1/1:13,5:16:3.78:134,4,0	0/0:8,10:15:2.87:0,3,27	0/0:32,0:30:33.06:0,33,481	0/1:14,0:14:15.17:15,0,254	0/1:28,0:27:63.09:63,0,413	0/1:23,0:22:2.33:2,0,418	1/1:16,10:23:44.41:471,44,0	1/1:15,7:19:34.91:390,35,0	0/1:7,6:12:3.28:188,0,3
chr10	93266459	.	CTG	C	397.74	PASS	AB=0.994;AC=20;AF=0.400;AN=50;BaseQRankSum=7.458;DP=530;FS=15.141;HRun=0;HaplotypeScore=140.3895;InbreedingCoeff=0.0636;MQ=41.26;MQ0=52;MQRankSum=-4.659;QD=1.36;ReadPosRankSum=2.562;VQSLOD=1.6510;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,1:20:7.18:0,7,39	0/0:17,0:17:29.22:0,29,300	0/1:3,0:2:8.08:8,0,23	./.	1/1:15,1:14:2.77:16,3,0	0/0:29,0:25:30.10:0,30,521	0/0:21,0:16:20.86:0,21,298	0/0:25,0:20:25.49:0,25,416	0/1:16,0:16:17.20:17,0,29	0/1:26,0:19:72.37:118,0,72	./.	0/0:23,0:23:12.04:0,12,204	0/1:17,0:17:2.76:3,0,602	0/0:13,0:12:9:0,9,133	0/0:21,0:20:8.86:0,9,79	1/1:11,0:10:9.75:56,10,0	0/1:27,0:26:3.23:3,0,95	1/1:16,0:8:0.17:4,0,0	0/0:10,0:8:14.45:0,14,119	1/1:22,0:17:8.86:34,9,0	./.	0/0:32,0:30:30.09:0,30,512	0/1:15,0:15:12.06:12,0,376	0/1:35,0:34:48.07:48,0,667	0/1:26,0:24:2.74:3,0,418	0/1:27,2:23:93.19:93,0,232	1/1:18,0:14:1.17:92,1,0	0/1:15,0:13:38.54:39,0,110
chr10	93266465	.	CTG	C	586.81	PASS	AB=0.959;AC=16;AF=0.320;AN=50;BaseQRankSum=4.490;DP=520;FS=21.950;HRun=0;HaplotypeScore=143.6048;InbreedingCoeff=-0.0361;MQ=40.61;MQ0=55;MQRankSum=-1.078;QD=2.05;ReadPosRankSum=2.735;VQSLOD=0.9674;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,5:21:8.70:92,9,0	0/1:13,1:16:92.81:93,0,145	./.	./.	1/1:18,0:17:2.85:22,3,0	0/0:28,0:24:24:0,24,269	0/0:20,0:15:14.80:0,15,204	0/0:28,0:22:45.67:0,46,467	0/1:16,0:16:16.52:17,0,33	0/1:28,0:21:52.45:52,0,134	0/0:9,1:9:0:0,0,0	0/0:21,0:21:9.01:0,9,128	0/1:15,0:15:8.84:9,0,501	0/0:13,0:12:12.03:0,12,188	0/0:10,8:19:0.75:0,1,2	0/0:10,0:9:2.12:0,2,13	0/1:21,6:26:37.08:255,0,37	0/0:16,0:8:4.32:0,4,26	0/0:11,0:8:17.20:0,17,171	1/1:22,0:17:6.02:33,6,0	./.	0/0:33,0:31:27.09:0,27,478	0/1:14,0:14:15.08:15,0,344	0/1:35,0:34:48.14:48,0,705	0/1:26,0:24:2.60:3,0,390	0/1:26,2:21:67.63:68,0,255	0/1:17,0:13:24.58:25,0,44	0/0:12,0:11:6.45:0,6,137
chr10	93266473	.	GTCTC	G	545.08	PASS	AB=0.968;AC=14;AF=0.280;AN=50;BaseQRankSum=3.657;DP=543;FS=36.122;HRun=0;HaplotypeScore=154.9724;InbreedingCoeff=-0.2591;MQ=38.99;MQ0=61;MQRankSum=-0.831;QD=2.03;ReadPosRankSum=2.727;VQSLOD=1.1292;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:20:5.81:0,6,33	0/0:18,0:17:14.70:0,15,185	./.	./.	0/0:20,0:18:2.19:0,2,7	0/0:27,1:23:14.95:0,15,136	0/0:21,0:16:8.72:0,9,111	0/0:35,0:25:53.86:0,54,489	1/1:14,1:15:0.53:58,1,0	0/1:30,1:22:99:102,0,156	0/0:14,0:11:0:0,0,1	0/0:21,0:21:9.02:0,9,113	0/1:13,0:13:6.81:7,0,377	0/0:14,0:13:15.05:0,15,229	0/0:18,0:17:3.01:0,3,48	0/1:11,0:10:16.26:23,0,16	0/1:22,5:26:32.33:137,0,32	0/0:15,0:7:8.81:0,9,33	0/1:18,0:15:44.90:45,0,171	0/1:20,0:15:11.02:17,0,11	./.	0/0:36,0:33:33.11:0,33,505	0/1:17,0:16:10.46:10,0,289	0/1:35,0:34:45.51:46,0,533	0/1:24,0:21:28.01:28,0,177	0/1:30,2:24:99:149,0,244	0/1:13,0:9:4.90:5,0,39	0/1:11,2:11:53.64:54,0,155
chr10	93266487	.	CTG	C	393.23	PASS	AB=0.936;AC=18;AF=0.346;AN=52;BaseQRankSum=7.541;DP=551;FS=0.000;HRun=0;HaplotypeScore=141.7203;InbreedingCoeff=0.1091;MQ=37.72;MQ0=61;MQRankSum=-5.363;QD=1.27;ReadPosRankSum=-2.236;VQSLOD=1.5830;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:21:4.25:0,4,13	0/1:17,0:16:3.03:3,0,216	./.	./.	0/1:18,3:18:0.16:0,0,0	1/1:20,0:15:1.09:3,1,0	0/1:26,0:20:6.81:13,0,7	0/1:33,2:23:25.74:26,0,481	0/1:10,2:12:1.41:77,0,1	0/1:26,6:23:95.75:111,0,96	0/1:17,0:14:0:0,0,1	0/0:23,0:23:21.05:0,21,358	0/0:15,0:15:42.11:0,42,689	0/0:18,0:17:33.11:0,33,606	0/0:16,0:15:2.86:0,3,24	1/1:8,2:9:14.23:87,14,0	0/1:24,0:23:31.33:31,0,62	1/1:11,2:6:11.30:74,11,0	0/0:19,0:16:38.83:0,39,339	0/1:18,3:15:2.68:3,0,21	0/0:15,0:6:0:0,0,0	0/0:36,0:33:45.14:0,45,813	0/0:23,0:22:28.35:0,28,776	0/0:32,0:31:43.08:0,43,917	0/0:18,0:15:27.84:0,28,468	0/1:32,1:26:62.86:63,0,171	0/1:15,1:12:18.83:38,0,19	0/1:11,1:11:7.33:7,0,197
chr10	93266489	.	G	GTC	1276.10	PASS	AB=0.997;AC=21;AF=0.404;AN=52;BaseQRankSum=8.849;DP=556;FS=6.119;HRun=0;HaplotypeScore=145.9002;InbreedingCoeff=0.2886;MQ=37.52;MQ0=60;MQRankSum=-8.785;QD=4.27;ReadPosRankSum=0.141;VQSLOD=2.6821;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:21:6.02:0,6,71	0/1:17,0:16:5.70:6,0,140	./.	./.	0/1:23,0:20:0.03:0,0,0	0/0:18,0:14:1.87:0,2,6	0/0:28,0:22:0.85:0,1,22	0/1:34,0:22:86.22:86,0,136	1/1:13,0:13:7.05:59,7,0	1/1:32,1:24:10:393,10,0	0/1:17,0:14:0.04:0,0,0	0/0:23,0:23:21.07:0,21,272	0/0:16,0:16:45.11:0,45,579	0/0:18,0:17:36.09:0,36,450	0/1:14,0:13:0:0,0,0	1/1:9,1:9:9.39:104,9,0	0/1:21,0:23:52.08:84,0,52	1/1:10,3:6:12.04:166,12,0	0/1:19,0:16:70.34:92,0,70	1/1:21,0:15:3.47:57,3,0	0/0:15,0:6:0:0,0,0	0/0:37,0:34:45.06:0,45,583	0/0:25,0:24:48.61:0,49,615	0/0:32,0:31:60.18:0,60,778	0/0:18,0:15:30.07:0,30,393	0/1:32,1:26:35.51:252,0,36	1/1:15,1:12:6.49:95,6,0	0/1:12,0:11:37.27:37,0,70
chr10	93266497	.	CTG	C	948.12	PASS	AB=0.891;AC=24;AF=0.462;AN=52;BaseQRankSum=9.268;DP=546;FS=10.903;HRun=0;HaplotypeScore=132.3372;InbreedingCoeff=0.1527;MQ=37.69;MQ0=51;MQRankSum=-9.883;QD=2.81;ReadPosRankSum=-2.798;VQSLOD=1.3223;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:23:5.47:0,5,38	0/1:17,0:16:5.66:6,0,213	./.	./.	1/1:18,4:19:2.39:18,2,0	1/1:20,0:16:3.70:27,4,0	1/1:26,0:22:5.32:60,5,0	0/1:37,3:28:99:127,0,141	1/1:9,2:11:10.18:62,10,0	0/1:20,10:25:29.67:217,0,30	1/1:12,7:15:2.35:23,2,0	0/0:20,0:20:30.06:0,30,495	0/0:18,0:18:51.13:0,51,874	0/0:16,0:16:39.03:0,39,705	0/1:14,0:13:0.11:0,0,0	1/1:5,3:8:14.52:97,15,0	0/1:23,0:22:46.56:47,0,104	0/1:12,2:7:21.33:61,0,21	0/1:14,3:14:56.92:150,0,57	1/1:13,5:13:0.19:7,0,0	0/0:14,0:7:0:0,0,0	0/0:37,0:34:54.15:0,54,957	0/0:26,0:25:57.15:0,57,980	0/0:31,0:30:63.20:0,63,1111	0/0:18,0:15:33.04:0,33,538	0/1:22,8:23:57.95:179,0,58	0/1:11,4:11:3.24:18,0,3	0/1:10,1:10:3.59:4,0,140
chr10	93266503	.	CTG	C	627.63	PASS	AB=0.899;AC=22;AF=0.423;AN=52;BaseQRankSum=9.120;DP=561;FS=10.495;HRun=0;HaplotypeScore=136.9535;InbreedingCoeff=0.1415;MQ=38.46;MQ0=51;MQRankSum=-6.931;QD=1.88;ReadPosRankSum=-1.704;VQSLOD=1.6555;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,5:20:2.54:0,3,47	0/1:18,0:17:0.76:1,0,192	./.	./.	1/1:22,1:20:2.39:18,2,0	1/1:20,0:16:3.76:47,4,0	1/1:26,0:22:8.72:86,9,0	0/1:39,1:27:8.68:9,0,363	1/1:10,1:11:1.29:71,1,0	0/1:26,5:25:99:145,0,138	1/1:15,6:17:2.35:23,2,0	0/0:19,0:19:33.11:0,33,625	0/0:19,0:19:54.14:0,54,970	0/0:15,0:15:39.13:0,39,749	0/1:16,0:15:0.11:0,0,0	1/1:8,1:9:3.56:78,4,0	0/1:23,0:22:43.76:44,0,164	0/1:16,0:8:10.89:11,0,28	0/1:11,3:10:58.45:58,0,106	0/1:16,2:14:0.71:1,0,15	0/0:14,0:7:0:0,0,0	0/0:37,0:35:60.14:0,60,1097	0/0:29,0:27:63.20:0,63,1122	0/0:36,0:35:75.01:0,75,1248	0/0:22,0:20:45.11:0,45,742	0/1:25,7:25:99:144,0,110	0/1:5,10:11:7.71:39,0,8	0/0:8,0:7:17.70:0,18,179
chr10	93266509	.	CTG	C	672.32	PASS	AB=0.959;AC=22;AF=0.393;AN=56;BaseQRankSum=8.727;DP=590;FS=8.272;HRun=0;HaplotypeScore=133.3527;InbreedingCoeff=-0.0430;MQ=40.70;MQ0=45;MQRankSum=-5.108;QD=1.85;ReadPosRankSum=-3.054;VQSLOD=1.2551;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,2:23:19.94:20,0,28	0/1:11,7:17:19.55:20,0,204	0/1:5,0:2:0.31:0,0,51	0/0:4,1:2:2.97:0,3,20	1/1:22,0:20:2.39:18,2,0	1/1:20,0:16:6.15:73,6,0	1/1:23,0:20:9.27:87,9,0	0/1:44,0:34:66:66,0,444	0/1:11,0:11:19.39:69,0,19	0/1:30,2:26:59.16:59,0,151	1/1:23,0:20:2.35:23,2,0	0/0:21,0:21:39.11:0,39,706	0/0:19,0:19:54.19:0,54,1014	0/0:14,0:14:39.13:0,39,752	1/1:17,0:16:1.31:18,1,0	0/1:12,0:12:39.83:70,0,40	0/1:22,0:21:34.20:34,0,146	0/1:15,1:8:32.09:32,0,76	0/1:13,0:9:30.97:31,0,33	0/0:19,0:14:4.54:0,5,18	0/0:12,1:7:0:0,0,0	0/0:36,0:34:60.19:0,60,1116	0/0:32,0:30:72.05:0,72,1229	0/0:36,0:35:75.19:0,75,1314	0/0:23,0:21:51.16:0,51,900	0/1:39,1:33:53.69:162,0,54	0/1:17,0:13:15.56:51,0,16	0/0:8,0:7:16.21:0,16,138
chr10	93268311	.	CAA	C	3966.29	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-0.172;DP=782;FS=2.396;HRun=4;HaplotypeScore=116.7455;InbreedingCoeff=0.9999;MQ=84.61;MQ0=0;MQRankSum=-4.321;QD=39.66;ReadPosRankSum=4.338;VQSLOD=2.5842;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,55:56:99:2163,147,0	1/1:1,12:13:36.12:530,36,0	0/0:19,0:19:49.69:0,50,840	0/0:33,0:33:96.32:0,96,1666	0/0:23,0:23:66.22:0,66,1184	0/0:25,0:25:75.26:0,75,1398	0/0:30,0:30:90.31:0,90,1679	0/0:37,0:37:99:0,105,1883	0/0:23,0:23:69.24:0,69,1292	0/0:30,0:30:87.28:0,87,1572	0/0:21,0:21:57.20:0,57,1058	0/0:27,0:27:81.25:0,81,1429	0/0:25,0:25:72.18:0,72,1246	0/0:30,0:30:90.30:0,90,1655	1/1:1,30:31:87.29:1273,87,0	0/0:33,0:33:93.32:0,93,1730	0/0:38,0:38:99:0,114,2064	0/0:23,0:23:69.22:0,69,1260	0/0:22,0:22:60.20:0,60,1092	0/0:26,0:26:78.27:0,78,1455	0/0:38,0:38:99:0,111,2020	0/0:26,0:26:78.22:0,78,1414	0/0:27,0:27:78.26:0,78,1405	0/0:41,0:41:99:0,120,2204	0/0:24,0:24:72.20:0,72,1278	0/0:22,0:22:66.23:0,66,1232	0/0:27,0:27:72.18:0,72,1218	0/0:12,0:11:36.12:0,36,674
chr10	93270931	.	TAG	T	14935.90	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=17.597;DP=799;FS=2.144;HRun=0;HaplotypeScore=132.8753;InbreedingCoeff=1.0000;MQ=82.60;MQ0=0;MQRankSum=-3.328;QD=40.15;ReadPosRankSum=2.390;VQSLOD=6.1977;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,147,2664	0/0:16,0:16:48.16:0,48,879	0/0:28,0:28:66.23:0,66,1221	0/0:24,0:24:48.17:0,48,866	1/1:0,20:20:60.20:853,60,0	0/0:31,0:30:90.29:0,90,1619	0/0:27,0:27:81.28:0,81,1478	1/1:1,22:23:66.21:928,66,0	1/1:0,26:26:69.23:989,69,0	1/1:1,23:24:69.21:970,69,0	1/1:0,28:28:78.26:1117,78,0	0/0:23,0:23:69.24:0,69,1265	0/0:18,0:18:51.16:0,51,902	0/0:25,0:25:75.26:0,75,1367	0/0:18,0:18:54.17:0,54,960	1/1:0,28:28:75.25:1075,75,0	0/0:33,0:33:93.32:0,93,1693	1/1:1,34:35:99:1419,99,0	1/1:1,20:21:60.20:859,60,0	1/1:0,25:25:75.25:1068,75,0	1/1:1,53:54:99:2193,154,0	0/0:34,0:34:99:0,102,1855	0/0:31,0:31:90.31:0,90,1650	0/0:45,0:45:99:0,126,2280	0/0:20,0:20:57.17:0,57,997	1/1:2,36:38:56.34:1490,56,0	1/1:3,29:32:90.30:1288,90,0	1/1:0,18:18:51.10:687,51,0
chr10	93271377	.	CA	C	195.54	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=4.794;DP=148;FS=0.738;HRun=1;HaplotypeScore=26.5035;InbreedingCoeff=0.3937;MQ=87.90;MQ0=1;MQRankSum=-0.734;QD=3.31;ReadPosRankSum=2.693;VQSLOD=-0.1446;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:21.01:0,21,230	0/0:2,0:2:2.88:0,3,18	0/0:11,1:10:17.46:0,17,197	0/0:15,2:11:17.19:0,17,273	1/1:5,0:5:10.30:42,10,0	0/0:4,0:4:9:0,9,90	0/0:5,0:5:15.02:0,15,170	0/1:10,0:10:11.33:11,0,19	1/1:4,0:4:7.38:27,7,0	1/1:2,1:3:3.89:35,4,0	1/1:1,0:1:2.22:7,2,0	0/0:4,0:4:12.02:0,12,134	0/0:4,0:4:12.04:0,12,163	0/0:1,0:1:2.99:0,3,24	0/0:5,0:5:14.99:0,15,176	0/1:8,0:8:8.98:27,0,9	0/0:10,0:10:10.01:0,10,239	0/1:4,0:4:8.85:30,0,9	0/0:3,1:4:6.85:0,7,49	0/1:4,0:4:13.84:29,0,14	0/1:10,0:10:3.35:51,0,3	0/0:5,0:5:11.51:0,12,115	0/0:2,0:2:6.02:0,6,81	0/0:1,0:1:3:0,3,25	0/0:5,0:5:9:0,9,108	1/1:7,0:7:14.11:64,14,0	1/1:1,0:1:2.96:19,3,0	1/1:2,0:2:5.42:23,5,0
chr10	93271378	.	AC	A	1057.45	PASS	AC=24;AF=0.462;AN=52;BaseQRankSum=1.921;DP=141;FS=3.895;HRun=7;HaplotypeScore=20.8892;InbreedingCoeff=0.7455;MQ=86.50;MQ0=1;MQRankSum=-1.914;QD=18.88;ReadPosRankSum=2.478;VQSLOD=2.2645;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:24.03:0,24,283	0/0:1,0:1:3.01:0,3,34	0/0:10,0:8:15.01:0,15,163	0/0:16,0:10:16.88:0,17,190	1/1:0,5:5:12.03:122,12,0	0/0:4,0:4:6.02:0,6,75	0/0:5,0:5:9.03:0,9,113	1/1:3,7:10:15.03:153,15,0	1/1:0,4:4:9.02:92,9,0	1/1:2,1:3:6.01:60,6,0	1/1:0,1:1:3.01:31,3,0	0/0:4,0:4:12.02:0,12,137	0/0:4,0:4:12.04:0,12,151	./.	0/0:5,0:5:15.04:0,15,177	1/1:2,4:6:12.02:122,12,0	0/0:10,0:10:24.05:0,24,281	1/1:3,1:4:5.40:59,5,0	./.	1/1:0,3:3:9.02:91,9,0	1/1:2,8:10:24.05:244,24,0	0/0:5,0:5:12.04:0,12,150	0/0:2,0:2:6.02:0,6,75	0/0:1,0:1:3.01:0,3,38	0/0:5,0:5:15.02:0,15,153	1/1:0,7:7:21.05:214,21,0	1/1:1,0:1:3.01:30,3,0	1/1:2,0:2:3:28,3,0
chr10	93271752	.	TC	T	6283.16	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=12.946;DP=501;FS=0.354;HRun=7;HaplotypeScore=73.5932;InbreedingCoeff=0.9673;MQ=76.37;MQ0=1;MQRankSum=-3.024;QD=24.74;ReadPosRankSum=0.244;VQSLOD=5.1079;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:51.16:0,51,641	0/0:1,0:1:3.01:0,3,38	0/0:18,0:16:28.32:0,28,313	0/0:7,0:6:11.62:0,12,119	1/1:0,21:21:57.12:575,57,0	0/0:9,0:9:27.07:0,27,322	0/0:27,0:27:75.23:0,75,923	1/1:7,21:28:63.14:641,63,0	1/1:2,24:26:69.15:704,69,0	1/1:2,15:17:39.07:391,39,0	1/1:2,4:6:15.03:152,15,0	0/0:26,0:26:66.21:0,66,828	0/0:15,0:15:36.11:0,36,449	0/0:14,0:14:39.10:0,39,465	0/0:15,0:15:42.13:0,42,516	1/1:1,23:24:60.14:611,60,0	0/0:29,0:29:75.23:0,75,931	1/1:1,6:7:18.04:184,18,0	1/1:2,16:18:48.11:489,48,0	1/1:1,13:14:36.08:367,36,0	1/1:7,33:40:87.19:887,87,0	0/0:18,0:18:51.16:0,51,640	0/0:9,0:9:24.08:0,24,302	0/0:25,0:25:66.20:0,66,817	0/0:12,0:12:24.08:0,24,301	1/1:5,19:24:60.13:611,60,0	1/1:2,12:14:36.08:367,36,0	1/1:0,15:15:30.03:305,30,0
chr10	93271759	.	CA	C	1141.16	PASS	AB=0.980;AC=21;AF=0.375;AN=56;BaseQRankSum=15.065;DP=504;FS=12.654;HRun=1;HaplotypeScore=99.9211;InbreedingCoeff=0.5877;MQ=73.33;MQ0=3;MQRankSum=-2.063;QD=4.41;ReadPosRankSum=3.373;VQSLOD=-0.7312;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.07:0,66,783	0/0:1,0:1:3.01:0,3,41	0/0:17,1:16:29.15:0,29,423	0/0:5,2:6:3.11:0,3,106	1/1:22,0:22:43.86:150,44,0	0/0:10,0:10:29.93:0,30,335	0/0:25,0:25:72.10:0,72,934	1/1:22,0:22:13.54:83,14,0	1/1:26,0:26:34.44:185,34,0	0/1:19,0:18:18.65:19,0,29	0/1:8,1:9:9.40:36,0,9	0/0:24,0:24:72.16:0,72,888	0/0:15,0:15:45.11:0,45,558	0/0:13,0:13:36.08:0,36,462	0/0:14,0:14:42.11:0,42,537	1/1:25,0:25:20.96:172,21,0	0/0:26,0:26:78.20:0,78,998	1/1:6,0:6:14.81:52,15,0	0/1:24,0:24:81.91:83,0,82	0/1:15,0:15:14.90:41,0,15	1/1:36,1:36:42.35:220,42,0	0/0:20,0:20:57.10:0,57,715	0/0:12,0:12:33.07:0,33,400	0/0:24,0:24:72.17:0,72,905	0/0:12,0:12:27.06:0,27,334	1/1:22,1:23:2.25:123,2,0	0/1:16,0:16:0.23:83,0,0	1/1:15,0:15:23.80:92,24,0
chr10	93271840	.	G	GT	4561.29	PASS	AB=0.823;AC=22;AF=0.393;AN=56;BaseQRankSum=15.746;DP=593;FS=50.276;HRun=2;HaplotypeScore=141.4034;InbreedingCoeff=0.6486;MQ=58.26;MQ0=9;MQRankSum=-14.528;QD=18.47;ReadPosRankSum=0.483;VQSLOD=1.3826;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,131,1096	0/0:4,0:4:9.15:0,9,46	0/0:29,0:18:44.73:0,45,525	0/0:30,0:16:32.84:0,33,322	1/1:13,7:20:19.93:330,20,0	0/0:13,0:13:27.06:0,27,282	0/0:25,0:25:41.27:0,41,355	0/1:19,0:18:26.48:207,0,26	1/1:16,13:29:34.08:709,34,0	1/1:17,7:23:20.05:561,20,0	1/1:8,7:15:2.95:177,3,0	0/0:23,0:23:66.19:0,66,804	0/0:20,0:20:57.18:0,57,706	0/0:15,0:15:42.13:0,42,520	0/0:12,0:12:35.98:0,36,322	1/1:15,8:22:22.17:455,22,0	0/0:37,0:37:99:0,102,898	0/1:4,3:7:14.28:101,0,14	1/1:10,7:17:11.44:417,11,0	1/1:11,6:17:2.35:247,2,0	0/1:17,4:19:30.64:237,0,31	0/0:26,0:25:67.12:0,67,793	0/0:18,0:18:54.17:0,54,659	0/0:35,0:35:84.50:0,84,1227	0/0:12,0:12:33.10:0,33,408	1/1:16,10:26:25.04:615,25,0	0/1:14,7:21:4.86:375,0,5	1/1:7,1:7:14.74:129,15,0
chr10	93271843	.	GTT	G	4690.03	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=8.650;DP=593;FS=16.481;HRun=4;HaplotypeScore=148.8945;InbreedingCoeff=0.7541;MQ=57.90;MQ0=9;MQRankSum=-9.783;QD=12.44;ReadPosRankSum=-5.430;VQSLOD=-0.3107;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:46,0:46:99:217,0,237	0/0:4,0:4:9.08:0,9,35	0/0:30,0:18:26.81:0,27,558	0/0:29,0:15:23.60:0,24,410	1/1:16,3:19:18.27:227,18,0	1/1:1,13:14:24.08:353,24,0	1/1:1,24:25:39.13:574,39,0	1/1:16,5:20:50.83:472,51,0	1/1:26,2:28:54.04:325,54,0	1/1:24,1:24:13.17:293,13,0	1/1:11,4:15:16.82:285,17,0	0/0:22,0:22:66.22:0,66,1082	0/0:20,0:20:60.20:0,60,1026	0/0:15,0:15:42.14:0,42,730	0/1:13,0:13:65.05:100,0,65	1/1:22,1:22:44.37:292,44,0	0/1:36,0:36:99:186,0,198	1/1:4,3:7:10.25:67,10,0	1/1:16,0:16:40.09:168,40,0	1/1:14,0:14:24.66:212,25,0	1/1:19,1:18:30.66:228,31,0	0/0:25,0:24:59.24:0,59,1026	0/0:19,0:19:51.17:0,51,851	0/0:37,0:37:99:0,108,1747	0/0:14,0:14:39.13:0,39,631	1/1:25,1:26:43.56:290,44,0	1/1:20,1:21:50.15:307,50,0	1/1:7,1:7:13.26:94,13,0
chr10	93271845	.	T	TG	12224.51	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=5.608;DP=595;FS=38.310;HRun=0;HaplotypeScore=111.7733;InbreedingCoeff=0.9702;MQ=55.99;MQ0=9;MQRankSum=-8.108;QD=31.92;ReadPosRankSum=-0.650;VQSLOD=2.2121;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,46:46:99:2072,132,0	1/1:0,4:4:12.04:190,12,0	0/0:30,0:17:32.66:0,33,577	0/0:30,0:14:22.48:0,22,397	1/1:9,3:19:50.51:548,51,0	1/1:13,0:13:7.09:16,7,0	1/1:24,0:24:11.52:26,12,0	1/1:17,4:20:59.74:654,60,0	1/1:9,4:26:72.19:925,72,0	1/1:14,5:23:48.04:728,48,0	1/1:6,3:15:42.71:497,43,0	0/0:22,0:22:66.22:0,66,916	0/0:21,0:21:60.20:0,60,838	0/0:15,0:15:42.14:0,42,586	1/1:0,15:15:36.12:560,36,0	1/1:12,4:23:70.68:791,71,0	1/1:0,37:37:99:1646,105,0	1/1:5,0:8:12.04:178,12,0	1/1:11,2:18:43.02:568,43,0	1/1:4,5:14:41.90:531,42,0	1/1:8,10:18:42.22:482,42,0	0/0:25,0:24:63.16:0,63,856	0/0:18,0:18:54.11:0,54,715	0/0:37,0:37:99:0,108,1434	0/0:14,0:14:39.12:0,39,530	1/1:14,2:26:72.28:833,72,0	1/1:8,6:21:62.78:797,63,0	1/1:4,2:6:17.57:181,18,0
chr10	93271850	.	T	TG	1415.58	PASS	AB=0.809;AC=12;AF=0.214;AN=56;BaseQRankSum=8.113;DP=605;FS=9.882;HRun=0;HaplotypeScore=145.8937;InbreedingCoeff=-0.2776;MQ=56.49;MQ0=8;MQRankSum=-9.428;QD=6.18;ReadPosRankSum=-5.752;VQSLOD=1.2781;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,1709	0/0:5,0:5:7.07:0,7,134	0/0:27,0:17:35.36:0,35,554	0/0:32,0:16:31.56:0,32,433	0/1:14,5:19:91.48:91,0,251	0/0:15,0:15:30.08:0,30,385	0/0:23,0:23:45.15:0,45,610	0/1:11,9:20:99:248,0,238	0/1:23,4:27:85.21:85,0,360	0/1:13,7:19:99:214,0,185	0/1:16,1:17:58.90:59,0,243	0/0:26,0:26:72.24:0,72,1007	0/0:22,0:22:66.19:0,66,885	0/0:15,0:15:42.13:0,42,572	0/0:16,0:16:39.03:0,39,479	0/1:16,7:22:99:158,0,275	0/0:39,0:39:99:0,108,1386	0/0:7,1:8:14.73:0,15,118	0/1:14,4:17:99:160,0,255	0/1:11,3:14:54.08:54,0,203	0/1:15,2:16:57:57,0,276	0/0:30,0:29:75.23:0,75,1002	0/0:19,0:19:57.17:0,57,764	0/0:37,0:37:99:0,110,1497	0/0:15,0:15:39.13:0,39,545	0/1:16,10:26:99:299,0,174	0/1:16,6:22:99:127,0,298	0/1:5,1:5:15.01:15,0,96
chr10	93272155	.	T	TTGTGTG	5690.79	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=7.766;DP=640;FS=12.959;HRun=0;HaplotypeScore=175.5944;InbreedingCoeff=0.7405;MQ=60.74;MQ0=11;MQRankSum=-6.767;QD=13.61;ReadPosRankSum=-0.722;VQSLOD=3.5295;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,21:42:2.68:0,3,11	1/1:1,6:7:1.80:272,2,0	0/0:41,0:25:13.23:0,13,318	0/1:44,0:29:36.79:37,0,471	1/1:16,1:21:8.91:63,9,0	1/1:26,0:24:19.99:205,20,0	1/1:27,0:25:6.45:48,6,0	1/1:34,0:32:45.51:479,46,0	1/1:27,0:30:46.08:652,46,0	1/1:28,0:28:49.03:734,49,0	1/1:11,0:11:5.51:58,6,0	0/0:23,0:23:39.10:0,39,732	0/0:15,0:15:30.10:0,30,570	0/0:23,0:23:54.15:0,54,1009	1/1:14,3:17:15.04:349,15,0	1/1:4,0:20:3.01:78,3,0	1/1:20,0:24:27.09:588,27,0	1/1:13,1:17:33:570,33,0	1/1:20,0:19:24.85:359,25,0	1/1:12,0:13:5.98:109,6,0	1/1:27,0:27:17.22:192,17,0	0/0:13,0:13:6.99:0,7,304	0/0:8,0:8:12.02:0,12,213	0/0:38,0:43:72:0,72,1374	0/0:12,0:12:27.09:0,27,556	1/1:22,0:23:42.14:539,42,0	1/1:18,0:18:17.81:205,18,0	1/1:0,1:2:6.02:153,6,0
chr10	93272175	.	GTC	G	353.68	PASS	AB=0.973;AC=14;AF=0.250;AN=56;BaseQRankSum=1.269;DP=668;FS=0.000;HRun=0;HaplotypeScore=142.2589;InbreedingCoeff=-0.1408;MQ=40.62;MQ0=47;MQRankSum=0.658;QD=1.25;ReadPosRankSum=-5.227;VQSLOD=0.4607;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:2.83:0,3,19	0/1:10,0:9:14.72:15,0,57	0/0:22,0:11:6.71:0,7,238	0/1:32,1:19:5.03:5,0,369	0/0:22,0:21:4.18:0,4,25	0/1:25,1:22:33.47:33,0,67	0/0:32,0:24:2.90:0,3,28	0/1:33,3:22:70.31:70,0,152	0/0:31,0:31:12.65:0,13,222	0/1:27,2:25:42.73:43,0,261	0/1:12,0:11:14.92:18,0,15	0/0:21,0:19:39.11:0,39,651	0/0:21,0:19:29.90:0,30,524	0/0:28,0:27:60.16:0,60,934	0/1:19,2:17:13.80:28,0,14	0/0:23,0:22:2.80:0,3,13	0/1:27,1:23:89.19:89,0,96	0/1:20,0:17:16.66:17,0,119	0/0:20,0:17:13.68:0,14,172	0/1:16,0:15:14.50:36,0,15	1/1:26,1:23:7.59:95,8,0	0/0:18,0:17:6.98:0,7,267	0/0:10,0:9:12.02:0,12,193	0/0:50,0:46:25.11:0,25,1111	0/0:20,0:18:27.09:0,27,463	0/0:29,0:27:11.21:0,11,272	0/1:18,0:18:9.17:9,0,84	0/1:6,0:6:0.55:45,0,1
chr10	93272195	.	GTC	G	620.90	PASS	AB=0.994;AC=20;AF=0.417;AN=48;BaseQRankSum=2.525;DP=619;FS=13.769;HRun=0;HaplotypeScore=138.3874;InbreedingCoeff=0.1644;MQ=35.56;MQ0=62;MQRankSum=-4.404;QD=1.74;ReadPosRankSum=-2.838;VQSLOD=0.9136;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,1:39:0:0,0,0	0/0:8,0:8:7.07:0,7,36	./.	./.	./.	0/1:26,0:22:0.07:0,0,0	0/0:35,0:23:0:0,0,0	1/1:33,0:18:18.68:120,19,0	0/1:37,0:36:9.06:9,0,20	0/1:23,0:19:67.46:67,0,77	./.	0/0:16,6:19:8.77:0,9,54	0/1:21,0:19:1.26:1,0,190	0/1:28,0:27:16.35:16,0,180	0/0:22,0:19:1.55:0,2,4	1/1:22,0:21:1.65:17,2,0	0/0:27,0:20:6.02:0,6,35	0/1:23,0:21:40.40:175,0,40	1/1:26,0:23:17.58:108,18,0	0/1:14,0:13:0:0,0,0	0/0:21,0:12:0:0,0,0	1/1:17,0:16:3.01:34,3,0	0/0:15,0:14:4.72:0,5,51	0/0:47,0:40:55:0,55,545	0/0:25,0:23:11.66:0,12,85	0/1:22,0:19:12.64:114,0,13	1/1:12,2:14:11.62:80,12,0	0/1:9,0:7:11.89:12,0,17
chr10	93272242	.	TGTGTGTGTGTGTGTGTGTGTGTGC	T	477.81	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=7.581;DP=575;FS=4.362;HRun=0;HaplotypeScore=238.2712;InbreedingCoeff=0.0785;MQ=38.94;MQ0=50;MQRankSum=-5.682;QD=5.76;ReadPosRankSum=4.577;VQSLOD=1.8157;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,4:19:0.29:0,0,1	1/1:1,1:2:3.01:199,3,0	0/0:12,0:2:4.83:0,5,89	0/0:7,0:1:3.01:0,3,58	0/0:19,0:18:18.01:0,18,337	0/0:31,0:28:4.26:0,4,42	./.	0/0:19,0:15:45.07:0,45,1335	0/0:23,0:21:6.88:0,7,85	0/0:22,0:19:43.33:0,43,1301	0/0:17,0:16:8.98:0,9,103	0/0:21,0:19:42.14:0,42,3967	0/0:22,0:20:45.15:0,45,3037	0/0:30,0:30:51.65:0,52,4642	0/0:6,13:17:0.47:0,0,1	0/1:21,0:20:60.01:112,0,60	0/0:26,0:17:18.01:0,18,960	0/1:25,0:22:99:111,0,903	0/1:14,0:13:34.61:35,0,729	0/0:18,0:17:6.34:0,6,124	0/0:36,0:25:5.91:0,6,53	0/0:13,0:12:24.08:0,24,2322	0/0:25,0:24:27.09:0,27,2363	0/0:35,0:28:51.15:0,51,4360	0/0:27,0:25:30.08:0,30,2787	0/0:25,0:23:12.67:0,13,1020	0/1:12,0:11:99:132,0,177	0/1:9,0:6:10.89:11,0,232
chr10	93272252	.	TGTGTGTGTGTGTGCGC	T	6231.16	PASS	AB=0.978;AC=25;AF=0.463;AN=54;BaseQRankSum=6.711;DP=566;FS=4.212;HRun=0;HaplotypeScore=189.9851;InbreedingCoeff=0.3903;MQ=41.73;MQ0=40;MQRankSum=-3.087;QD=20.70;ReadPosRankSum=-2.399;VQSLOD=3.6231;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:4.25:4,0,24	1/1:4,0:4:2.93:108,3,0	0/0:17,0:5:10.54:0,11,66	0/0:11,0:2:5.69:0,6,44	1/1:17,1:17:20.83:303,21,0	0/1:29,0:28:14.81:27,0,15	./.	0/1:27,0:24:95.80:651,0,96	1/1:24,0:22:5.30:122,5,0	0/1:20,0:18:62.68:522,0,63	1/1:16,0:15:15.05:290,15,0	0/0:21,0:19:42.14:0,42,2642	0/0:21,0:19:45.60:0,46,1785	0/0:27,0:27:51.16:0,51,2989	0/0:15,0:14:0.47:0,0,1	1/1:16,3:18:15.05:504,15,0	0/0:26,0:19:17.01:0,17,378	0/1:23,2:22:83.10:1025,0,83	0/1:11,1:11:23.27:374,0,23	1/1:18,2:19:11.90:195,12,0	1/1:33,0:25:15.05:232,15,0	0/0:15,0:14:30.10:0,30,1654	0/0:24,0:23:33.11:0,33,1653	0/0:34,0:27:51.15:0,51,2806	0/0:25,0:23:30.10:0,30,1912	1/1:18,0:17:38.96:1077,39,0	1/1:9,1:10:6.86:719,7,0	0/1:10,0:7:14.90:78,0,15
chr10	93272254	.	TGTGTGTGTGTGCGC	T	7047.88	PASS	AB=0.941;AC=29;AF=0.518;AN=56;BaseQRankSum=5.189;DP=536;FS=2.552;HRun=0;HaplotypeScore=169.7765;InbreedingCoeff=0.6235;MQ=44.45;MQ0=37;MQRankSum=-3.641;QD=23.41;ReadPosRankSum=-3.288;VQSLOD=3.6705;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:4.25:4,0,25	1/1:4,0:4:2.93:94,3,0	0/0:19,0:7:17.33:0,17,145	0/0:12,0:2:5.69:0,6,44	1/1:13,3:15:20.88:303,21,0	0/1:24,0:25:14.04:45,0,14	0/1:31,0:26:0:0,0,0	1/1:28,0:25:16.07:870,16,0	1/1:18,2:18:5.86:144,6,0	0/1:14,3:15:9.32:649,0,9	1/1:13,0:13:15.05:288,15,0	0/0:20,0:18:42.14:0,42,2322	0/0:21,0:19:48.13:0,48,1575	0/0:26,0:26:48.16:0,48,2605	0/0:15,0:14:0.47:0,0,1	1/1:11,6:16:21.07:623,21,0	0/0:26,0:20:16.88:0,17,263	0/1:21,1:19:14.73:997,0,15	1/1:11,0:10:23.86:467,24,0	1/1:15,4:18:15.03:270,15,0	1/1:26,2:21:15.05:232,15,0	0/0:15,0:14:30.10:0,30,1465	0/0:23,0:22:33.11:0,33,1461	0/0:32,0:25:48.16:0,48,2461	0/0:26,0:24:33.11:0,33,1727	1/1:8,7:14:39.13:1253,39,0	1/1:4,4:8:21.02:687,21,0	1/1:9,0:6:9.02:124,9,0
chr10	93272256	.	TGTGTGTGTGC	T	4212.02	PASS	AB=0.915;AC=37;AF=0.661;AN=56;BaseQRankSum=10.550;DP=506;FS=4.047;HRun=0;HaplotypeScore=159.5280;InbreedingCoeff=0.6223;MQ=45.60;MQ0=34;MQRankSum=-4.970;QD=12.17;ReadPosRankSum=-3.907;VQSLOD=1.9924;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:0.55:41,1,0	1/1:4,0:4:6.01:104,6,0	0/1:21,0:9:39.06:39,0,40	0/1:13,0:3:4.67:5,0,11	1/1:17,0:16:23.64:186,24,0	1/1:5,18:23:3.01:98,3,0	0/1:8,22:24:0:0,0,0	1/1:24,0:21:49.08:425,49,0	1/1:13,0:16:6.44:59,6,0	1/1:12,0:12:9.09:354,9,0	1/1:9,0:9:14.90:115,15,0	0/0:19,0:17:42.01:0,42,1599	0/0:21,0:19:47.89:0,48,1018	0/0:26,0:26:48.12:0,48,1810	0/1:15,0:14:0:0,0,0	1/1:18,0:17:24.02:360,24,0	0/1:25,0:19:44.39:157,0,44	1/1:13,0:16:12.12:530,12,0	1/1:10,0:10:23.80:273,24,0	1/1:18,0:19:17.85:146,18,0	1/1:21,0:14:17.92:137,18,0	0/0:16,0:15:33:0,33,998	0/0:22,0:22:35.69:0,36,970	0/0:31,0:25:51.08:0,51,1738	0/0:25,0:23:33.04:0,33,1185	1/1:14,0:13:39.04:661,39,0	1/1:6,0:7:21.01:409,21,0	1/1:9,0:6:8.97:114,9,0
chr10	93272264	.	TGC	T	2962.94	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=11.348;DP=475;FS=1.049;HRun=0;HaplotypeScore=127.2851;InbreedingCoeff=0.7153;MQ=53.10;MQ0=16;MQRankSum=-5.850;QD=8.71;ReadPosRankSum=-2.485;VQSLOD=2.7065;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:6.94:90,7,0	1/1:4,0:4:5.99:48,6,0	0/1:25,0:12:40.35:40,0,70	0/1:16,0:6:9.37:9,0,38	1/1:18,2:19:32.87:258,33,0	1/1:20,0:19:2.96:29,3,0	0/1:26,0:23:0:0,0,0	1/1:23,5:25:71.81:586,72,0	1/1:18,0:17:6.45:48,6,0	1/1:13,0:12:32.49:227,32,0	1/1:8,1:9:14.90:114,15,0	0/0:21,0:19:50.62:0,51,571	0/0:15,0:13:29.91:0,30,300	0/0:21,0:21:33.10:0,33,473	0/1:13,0:13:0:0,0,0	1/1:14,4:18:23.59:167,24,0	1/1:17,1:16:28.17:221,28,0	1/1:16,1:15:41.02:256,41,0	1/1:11,0:11:26.58:183,27,0	1/1:16,2:18:20.95:170,21,0	1/1:12,5:13:23.91:186,24,0	0/0:17,0:16:38.75:0,39,346	0/0:17,0:17:29.38:0,29,308	0/0:26,0:23:47.49:0,47,552	0/0:18,0:17:32.64:0,33,352	1/1:11,4:15:44.12:303,44,0	1/1:7,1:8:23.32:142,23,0	1/1:5,0:4:11.82:82,12,0
chr10	93272299	.	A	AT	8067.88	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=5.107;DP=532;FS=11.039;HRun=6;HaplotypeScore=110.3250;InbreedingCoeff=0.9967;MQ=68.77;MQ0=0;MQRankSum=-5.494;QD=32.66;ReadPosRankSum=0.116;VQSLOD=3.1885;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:75.16:0,75,765	0/0:10,0:10:27.06:0,27,275	0/0:28,0:26:63.12:0,63,633	0/0:29,0:29:58.28:0,58,560	1/1:3,25:28:72.23:893,72,0	0/0:17,0:17:18.04:0,18,184	0/0:26,0:26:20.91:0,21,214	1/1:7,23:30:69.22:867,69,0	1/1:1,16:18:48.15:597,48,0	1/1:3,13:16:36.11:448,36,0	1/1:1,9:10:27.09:340,27,0	0/0:17,0:17:45.10:0,45,457	0/0:13,0:13:33.07:0,33,337	0/0:19,0:19:45.09:0,45,459	0/0:18,0:18:18.03:0,18,181	1/1:1,22:23:66.18:813,66,0	0/0:20,0:20:51.12:0,51,520	1/1:1,21:22:57.18:711,57,0	1/1:0,19:19:57.14:687,57,0	1/1:2,16:18:48.15:599,48,0	1/1:1,19:20:54.17:679,54,0	0/0:13,0:13:36.08:0,36,367	0/0:14,0:14:42.08:0,42,422	0/0:18,0:18:54.12:0,54,551	0/0:11,0:11:30.07:0,30,305	1/1:2,14:16:42.13:528,42,0	1/1:1,12:12:33.11:415,33,0	1/1:1,13:14:39.12:490,39,0
chr10	93272754	.	A	AGCATC	24245.92	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=5.234;DP=680;FS=1.296;HRun=0;HaplotypeScore=159.8946;InbreedingCoeff=0.9837;MQ=78.05;MQ0=0;MQRankSum=-20.104;QD=75.06;ReadPosRankSum=-3.562;VQSLOD=5.3238;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,175,3857	0/0:3,0:3:9.03:0,9,201	0/0:22,0:22:60.21:0,60,1287	0/0:21,0:21:53.37:0,53,1138	1/1:9,16:26:36.12:1148,36,0	0/0:17,0:17:51.18:0,51,1136	0/0:33,0:33:96.31:0,96,2061	1/1:16,16:33:93.31:2782,93,0	1/1:3,22:26:72.25:2252,72,0	1/1:10,21:32:99:2985,99,0	1/1:2,10:16:27.09:867,27,0	0/0:22,0:22:66.23:0,66,1472	0/0:22,0:22:63.22:0,63,1387	0/0:35,0:35:99:0,102,2258	0/0:19,0:19:51.18:0,51,1118	1/1:2,18:23:57.20:1832,57,0	0/0:36,0:36:99:0,108,2386	1/1:7,21:29:72.25:2288,72,0	1/1:7,10:18:51.13:1429,51,0	1/1:5,14:21:48.16:1517,48,0	1/1:10,10:25:33.58:1027,34,0	0/0:10,0:10:27.09:0,27,602	0/0:16,0:16:48.16:0,48,1071	0/0:29,0:29:84.29:0,84,1873	0/0:12,0:12:36.12:0,36,780	1/1:11,27:39:99:3466,111,0	1/1:6,21:27:75.26:2363,75,0	1/1:0,3:7:9.03:290,9,0
chr10	93274135	.	GT	G	4210.79	PASS	AB=0.679;AC=36;AF=0.643;AN=56;BaseQRankSum=8.947;DP=621;FS=0.879;HRun=14;HaplotypeScore=85.7693;InbreedingCoeff=0.8042;MQ=71.38;MQ0=6;MQRankSum=-2.816;QD=10.10;ReadPosRankSum=2.061;VQSLOD=4.5508;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:36:47.25:142,47,0	1/1:0,0:7:14.26:41,14,0	0/0:47,0:22:3.12:0,3,92	0/0:35,0:19:10.17:0,10,94	1/1:7,20:29:12.55:333,13,0	1/1:5,15:20:41.62:288,42,0	1/1:3,9:13:25.82:170,26,0	1/1:8,17:26:52.37:342,52,0	1/1:5,8:13:23.76:164,24,0	1/1:3,18:21:49.20:327,49,0	1/1:8,13:22:6.71:178,7,0	0/0:10,0:11:32.80:0,33,281	0/0:17,1:18:27.34:0,27,375	0/0:11,0:13:26.01:0,26,251	1/1:2,0:24:39.38:123,39,0	1/1:6,17:23:32.70:226,33,0	1/1:6,12:19:31.74:211,32,0	1/1:3,12:16:6.95:184,7,0	0/1:11,3:17:16.94:52,0,17	1/1:12,24:36:38.57:386,39,0	0/1:5,8:13:1.48:116,0,1	0/0:15,1:16:27.17:0,27,360	0/0:23,0:23:35.99:0,36,323	0/0:22,0:22:35.89:0,36,450	0/0:16,2:18:12.44:0,12,252	1/1:11,17:29:21.61:286,22,0	1/1:10,22:33:29.06:343,29,0	1/1:0,16:18:45.72:298,46,0
chr10	93274495	.	AAGCAAGCACTCTGTCAACTG	A	22293.02	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=16.665;DP=540;FS=18.839;HRun=0;HaplotypeScore=292.2880;InbreedingCoeff=0.9675;MQ=61.39;MQ0=0;MQRankSum=-14.910;QD=118.58;ReadPosRankSum=4.020;VQSLOD=3.3235;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,10439	0/0:6,0:6:18.06:0,18,1750	0/0:19,0:19:54.18:0,54,3781	0/0:20,0:19:54.17:0,54,3316	1/1:3,14:16:36.08:1638,36,0	0/0:17,0:17:51.18:0,51,4504	0/0:28,0:28:81.25:0,81,6563	1/1:3,10:13:30.06:913,30,0	1/1:3,13:15:33.11:1888,33,0	1/1:2,17:18:48.14:2185,48,0	1/1:2,13:15:39.13:2098,39,0	0/0:23,0:23:66.23:0,66,5922	0/0:20,0:20:54.17:0,54,4615	0/0:17,0:17:51.17:0,51,4339	0/0:23,0:23:69.24:0,69,6190	1/1:2,9:11:24.08:1373,24,0	0/0:43,0:43:99:0,120,10067	1/1:1,6:7:12.04:687,12,0	1/1:0,5:5:15.03:711,15,0	1/1:4,27:30:72.25:4116,72,0	1/1:4,3:7:3.01:172,3,0	0/0:28,0:28:81.28:0,81,7116	0/0:17,0:17:48.16:0,48,4439	0/0:34,0:34:99:0,99,8267	0/0:13,0:13:39.13:0,39,3103	1/1:3,16:19:48.16:2747,48,0	1/1:2,17:18:45.15:2569,45,0	1/1:1,7:8:21.07:1197,21,0
chr10	93276445	.	C	CAT	1099.04	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.703;DP=665;FS=0.756;HRun=0;HaplotypeScore=84.5433;InbreedingCoeff=0.9858;MQ=75.53;MQ0=0;MQRankSum=-2.156;QD=28.18;ReadPosRankSum=-0.513;VQSLOD=4.5947;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:93.28:0,93,1168	0/0:14,0:14:42.13:0,42,532	0/0:23,0:23:31.53:0,32,509	0/0:19,0:19:39.42:0,39,463	0/0:18,0:18:45.14:0,45,572	1/1:4,21:25:12.99:764,13,0	1/1:5,9:14:27.09:451,27,0	0/0:19,0:19:51.16:0,51,649	0/0:16,0:16:45.14:0,45,573	0/0:43,0:43:99:0,111,1394	0/0:32,0:32:81.23:0,81,1004	0/0:17,0:17:51.16:0,51,649	0/0:14,0:14:36.10:0,36,445	0/0:24,0:24:57.18:0,57,725	0/0:16,0:16:45.14:0,45,569	0/0:23,0:23:66.17:0,66,800	0/0:45,0:46:99:0,126,1561	0/0:23,0:23:57.16:0,57,710	0/0:24,0:24:45.11:0,45,533	0/0:25,0:25:66.21:0,66,840	0/0:31,0:31:84.21:0,84,1038	0/0:27,0:27:72.22:0,72,903	0/0:27,0:27:66.65:0,67,813	0/0:26,0:26:60.19:0,60,760	0/0:18,0:18:51.12:0,51,617	0/0:30,0:30:84.26:0,84,1055	0/0:21,0:21:60.17:0,60,746	0/0:11,0:11:30.10:0,30,382
chr10	93276559	.	CAG	C	1005.78	PASS	AB=0.926;AC=20;AF=0.370;AN=54;BaseQRankSum=-0.258;DP=500;FS=1.755;HRun=0;HaplotypeScore=89.1338;InbreedingCoeff=0.4730;MQ=64.73;MQ0=8;MQRankSum=1.640;QD=5.03;ReadPosRankSum=0.878;VQSLOD=2.8977;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:8.84:0,9,78	0/1:6,0:6:0:0,0,0	0/0:20,0:11:5.89:0,6,60	0/0:44,0:20:2.80:0,3,44	0/1:17,0:18:15.23:15,0,117	0/0:18,0:18:4.99:0,5,43	0/0:21,0:21:5.40:0,5,49	0/0:22,0:22:16.35:0,16,174	0/1:17,1:18:27.13:147,0,27	1/1:20,2:22:17.99:166,18,0	1/1:17,2:19:21:201,21,0	0/0:12,0:10:3:0,3,25	0/0:16,0:16:6.91:0,7,81	./.	0/0:8,0:8:3:0,3,25	1/1:10,4:13:14.99:151,15,0	0/0:20,0:21:11.98:0,12,99	0/1:16,4:20:4.92:139,0,5	1/1:25,2:29:9.74:133,10,0	1/1:12,2:15:5.70:64,6,0	1/1:9,2:10:2.84:14,3,0	0/0:16,0:16:12:0,12,119	0/0:14,0:14:0:0,0,0	0/0:26,0:24:11.94:0,12,92	0/0:12,0:13:3:0,3,26	0/0:12,0:12:9.02:0,9,109	1/1:14,2:19:14.67:116,15,0	1/1:4,0:7:5.68:28,6,0
chr10	93276600	.	TG	T	2475.45	PASS	AB=0.804;AC=28;AF=0.500;AN=56;BaseQRankSum=2.894;DP=495;FS=1.978;HRun=9;HaplotypeScore=115.6937;InbreedingCoeff=0.7699;MQ=43.63;MQ0=17;MQRankSum=-2.496;QD=10.58;ReadPosRankSum=3.729;VQSLOD=2.5037;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:25.11:0,25,278	0/0:4,0:4:7.22:0,7,58	0/0:42,1:19:23.37:0,23,302	0/0:42,0:6:10.10:0,10,70	1/1:3,9:12:9:82,9,0	0/0:20,0:20:27.51:0,28,298	0/0:19,1:18:12.87:0,13,125	1/1:8,14:21:39:357,39,0	1/1:7,8:15:11.97:109,12,0	1/1:7,17:24:48:438,48,0	1/1:5,9:13:11.49:109,11,0	0/0:9,0:7:8.97:0,9,89	0/0:11,0:9:0.05:0,0,74	0/0:4,0:11:8.99:0,9,44	0/0:17,0:17:26.67:0,27,283	1/1:3,11:13:30:274,30,0	0/1:6,0:16:7.13:15,0,7	1/1:5,11:15:21:192,21,0	1/1:8,13:20:41.99:377,42,0	1/1:3,9:10:5.96:55,6,0	1/1:5,16:17:16.83:163,17,0	0/0:6,0:10:2.84:0,3,14	0/1:6,0:7:0:0,0,0	0/0:23,0:27:30:0,30,201	0/0:12,0:11:18.04:0,18,199	1/1:5,9:13:27:247,27,0	1/1:5,12:17:23.90:208,24,0	1/1:4,3:5:5.99:55,6,0
chr10	93276621	.	GAGAGACAGAGAC	G	5463.36	PASS	AB=0.818;AC=25;AF=0.446;AN=56;BaseQRankSum=4.585;DP=483;FS=3.937;HRun=0;HaplotypeScore=167.1315;InbreedingCoeff=0.8186;MQ=45.15;MQ0=9;MQRankSum=-4.562;QD=31.58;ReadPosRankSum=2.909;VQSLOD=4.4509;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:26:21.92:0,22,819	0/0:7,0:9:14.55:0,15,285	0/0:33,0:17:12.04:0,12,222	0/0:42,0:11:15.05:0,15,579	1/1:7,1:7:0.47:1,0,0	0/0:10,0:19:24.08:0,24,919	0/0:9,0:21:9.50:0,10,384	1/1:17,0:16:3.01:81,3,0	1/1:2,15:17:27.09:895,27,0	1/1:9,19:28:57.10:1522,57,0	1/1:4,1:5:2.97:20,3,0	0/0:11,0:11:24.08:0,24,1137	0/0:17,0:16:30.10:0,30,1607	0/0:11,0:11:18.04:0,18,900	0/0:17,0:21:8.06:0,8,222	1/1:7,5:12:18.02:542,18,0	0/0:12,0:21:18.05:0,18,252	1/1:6,5:11:16.64:457,17,0	1/1:12,2:14:12.01:283,12,0	0/1:7,2:9:0.01:0,0,0	1/1:12,2:13:1.82:18,2,0	0/0:17,0:17:21.07:0,21,926	0/0:10,0:10:18.06:0,18,625	0/0:33,0:31:47.68:0,48,2293	0/0:13,0:12:30.10:0,30,1714	1/1:6,5:11:21.07:702,21,0	1/1:10,14:24:24.08:735,24,0	1/1:1,2:3:6.02:209,6,0
chr10	93276633	.	C	CAG	2384.71	PASS	AB=0.912;AC=16;AF=0.286;AN=56;BaseQRankSum=2.004;DP=478;FS=0.496;HRun=0;HaplotypeScore=121.7090;InbreedingCoeff=-0.1978;MQ=47.82;MQ0=7;MQRankSum=-1.040;QD=10.51;ReadPosRankSum=-4.148;VQSLOD=2.8195;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:30.54:0,31,411	0/0:10,0:10:14.78:0,15,179	0/0:24,0:12:31.02:0,31,354	0/0:28,0:14:18.09:0,18,350	0/1:7,3:10:51.05:137,0,51	0/1:16,0:16:53.98:54,0,171	0/1:24,0:23:22.28:22,0,143	0/1:17,5:21:99:389,0,240	0/1:16,0:16:2.92:59,0,3	0/1:23,0:23:78.09:425,0,78	0/1:5,0:5:65.85:88,0,66	0/0:10,0:10:27.09:0,27,371	0/0:16,0:15:29.89:0,30,412	0/0:13,0:13:24.08:0,24,328	0/0:19,0:18:11.80:0,12,141	0/1:10,5:16:39.26:39,0,183	0/0:21,0:20:26.73:0,27,224	0/1:10,1:11:45.22:45,0,111	0/1:15,1:16:99:312,0,144	0/1:11,0:11:26.17:183,0,26	0/1:15,1:15:62.44:177,0,62	0/0:17,0:17:30.10:0,30,408	0/0:16,0:16:32.72:0,33,432	0/0:35,0:33:60.05:0,60,799	0/0:14,0:13:36.12:0,36,494	0/1:8,10:18:37.42:494,0,37	1/1:19,0:19:8.91:101,9,0	0/1:3,0:3:18:21,0,18
chr10	93278635	.	G	GTTATTTAT	5174.92	PASS	AB=1.000;AC=41;AF=0.976;AN=42;BaseQRankSum=-2.257;DP=282;FS=8.498;HRun=0;HaplotypeScore=81.6213;InbreedingCoeff=-0.1133;MQ=58.94;MQ0=2;MQRankSum=-1.293;QD=20.87;ReadPosRankSum=0.405;VQSLOD=3.1963;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:16:8.67:374,9,0	1/1:2,0:2:3.01:92,3,0	./.	./.	1/1:10,0:10:3.01:71,3,0	1/1:9,0:9:12.03:320,12,0	1/1:6,0:6:3.01:99,3,0	1/1:32,0:32:30.01:599,30,0	1/1:8,0:8:3.01:94,3,0	1/1:14,0:14:3.01:105,3,0	./.	1/1:6,2:8:12.04:398,12,0	1/1:4,2:6:3.01:123,3,0	./.	./.	1/1:6,0:6:6.01:129,6,0	1/1:23,0:21:15.03:356,15,0	1/1:15,0:15:16.29:433,16,0	1/1:16,0:14:3.01:98,3,0	1/1:10,0:10:15.05:478,15,0	0/1:5,0:4:0.90:88,0,1	1/1:5,1:6:3.01:123,3,0	./.	./.	1/1:8,4:12:12.04:389,12,0	1/1:13,0:13:3.01:104,3,0	1/1:14,0:14:15.03:403,15,0	1/1:15,0:14:9.03:303,9,0
chr10	93278674	.	AGT	A	4470.74	PASS	AB=0.774;AC=34;AF=0.607;AN=56;BaseQRankSum=6.319;DP=283;FS=2.185;HRun=0;HaplotypeScore=52.0346;InbreedingCoeff=0.6819;MQ=57.86;MQ0=2;MQRankSum=-0.797;QD=22.69;ReadPosRankSum=2.128;VQSLOD=5.0947;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,10:13:28.52:309,29,0	1/1:0,7:7:15.05:185,15,0	0/0:11,0:7:15.05:0,15,221	0/0:9,0:8:21.54:0,22,324	1/1:1,7:8:21.07:258,21,0	0/1:8,1:9:12.84:13,0,315	0/0:5,0:5:15.05:0,15,244	1/1:6,21:27:63.14:740,63,0	1/1:0,2:2:3.01:37,3,0	1/1:1,7:8:20.64:246,21,0	1/1:0,6:6:18.06:222,18,0	0/0:9,0:9:27.09:0,27,416	0/0:16,0:16:45.15:0,45,717	0/0:8,0:8:24.08:0,24,391	1/1:0,7:7:21.07:259,21,0	1/1:2,7:9:23.44:266,23,0	1/1:6,10:14:21.65:278,22,0	0/1:7,5:12:27.87:136,0,28	1/1:1,4:4:9.03:111,9,0	1/1:3,12:16:38.48:450,38,0	0/1:2,9:10:27.41:166,0,27	0/1:11,1:12:0.80:1,0,494	0/0:7,0:7:18.06:0,18,293	0/0:7,0:7:21.07:0,21,342	0/0:14,0:14:36.11:0,36,548	1/1:1,9:10:29.68:342,30,0	1/1:1,10:12:32.69:379,33,0	1/1:0,2:2:6.02:74,6,0
chr10	93278676	.	T	TTATTTATTTA	5161.02	PASS	AB=0.980;AC=35;AF=0.625;AN=56;BaseQRankSum=8.491;DP=283;FS=0.612;HRun=0;HaplotypeScore=89.3342;InbreedingCoeff=0.4490;MQ=58.15;MQ0=3;MQRankSum=-1.523;QD=23.89;ReadPosRankSum=1.715;VQSLOD=3.6532;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,3:11:32.22:568,32,0	1/1:7,0:7:14.20:92,14,0	0/0:12,0:7:15.05:0,15,255	0/0:11,0:9:24.54:0,25,410	1/1:7,1:8:23.44:240,23,0	0/1:8,0:8:2.59:3,0,363	0/0:5,0:5:15.05:0,15,289	1/1:28,0:28:69.28:583,69,0	1/1:3,0:3:5.60:28,6,0	1/1:7,1:8:23.04:344,23,0	1/1:6,0:6:16.44:93,16,0	0/1:10,0:10:46.45:46,0,431	0/0:16,0:16:7.18:0,7,738	0/0:8,0:8:24.08:0,24,518	1/1:7,0:7:19.74:134,20,0	1/1:8,1:9:23.55:373,24,0	1/1:12,2:12:29:454,29,0	0/1:10,1:11:41.55:371,0,42	0/1:5,0:4:9.46:52,0,9	1/1:14,2:16:43.45:602,43,0	0/1:10,0:9:27.94:100,0,28	0/1:12,0:12:39.79:40,0,528	0/0:8,0:8:18.06:0,18,344	0/0:7,0:7:21.07:0,21,432	0/1:14,0:14:99:143,0,572	1/1:9,1:10:28.94:416,29,0	1/1:11,1:12:34.87:443,35,0	1/1:3,0:2:5.90:37,6,0
chr10	93279560	.	T	TCCGCCTC	2119.09	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=1.423;DP=542;FS=2.713;HRun=0;HaplotypeScore=129.1421;InbreedingCoeff=0.9253;MQ=87.35;MQ0=0;MQRankSum=-7.386;QD=39.24;ReadPosRankSum=-3.089;VQSLOD=2.9788;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,10:36:37.25:1109,37,0	./.	0/0:18,0:18:29.92:0,30,479	0/0:21,0:22:18.50:0,18,572	0/0:13,0:13:27.09:0,27,644	0/0:15,0:15:39.13:0,39,931	0/0:32,0:32:75.19:0,75,1595	0/0:13,0:13:10.27:0,10,222	0/0:17,0:17:45.15:0,45,1074	0/0:20,0:20:60.19:0,60,1301	0/0:10,0:10:8.92:0,9,192	0/0:22,0:22:42.14:0,42,1002	0/0:24,0:24:63.22:0,63,1480	0/0:20,0:20:48.16:0,48,1146	1/1:6,10:18:30.10:1131,30,0	0/0:19,0:19:48.16:0,48,1146	0/0:32,0:32:90.26:0,90,1972	0/0:38,0:38:99:0,99,2363	0/0:14,0:14:18.06:0,18,430	0/0:20,0:20:42.14:0,42,977	0/0:27,0:27:63.22:0,63,1408	0/0:11,0:11:30.10:0,30,693	0/0:10,0:10:15.05:0,15,358	0/0:25,0:25:69.24:0,69,1623	0/0:15,0:15:39.07:0,39,832	0/0:17,0:17:42.14:0,42,940	0/0:19,0:19:48.12:0,48,1058	0/0:11,0:11:15.05:0,15,358
chr10	93280920	.	TTA	T	1424.91	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.376;DP=603;FS=0.000;HRun=0;HaplotypeScore=70.8074;InbreedingCoeff=0.9983;MQ=88.19;MQ0=0;MQRankSum=-0.891;QD=37.50;ReadPosRankSum=1.241;VQSLOD=5.7726;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,126,2316	0/0:11,0:11:33.11:0,33,618	0/0:20,0:20:49.33:0,49,954	0/0:22,0:22:60.17:0,60,1045	0/0:18,0:18:51.17:0,51,955	1/1:0,14:14:42.14:619,42,0	1/1:1,23:24:63.21:928,63,0	0/0:32,0:32:90.29:0,90,1627	0/0:17,0:17:48.16:0,48,899	0/0:13,0:13:36.12:0,36,628	0/0:10,0:10:24.08:0,24,439	0/0:26,0:26:78.27:0,78,1445	0/0:30,0:30:78.27:0,78,1448	0/0:32,0:32:96.33:0,96,1787	0/0:29,0:29:84.29:0,84,1573	0/0:12,0:12:33.11:0,33,618	0/0:32,0:32:96.32:0,96,1742	0/0:18,0:18:54.19:0,54,998	0/0:18,0:18:48.14:0,48,837	0/0:14,0:14:42.14:0,42,776	0/0:38,0:38:99:0,114,2123	0/0:22,0:22:66.21:0,66,1205	0/0:10,0:10:30.10:0,30,551	0/0:27,0:27:78.27:0,78,1437	0/0:13,0:13:39.13:0,39,729	0/0:23,0:23:63.22:0,63,1161	0/0:18,0:18:48.16:0,48,899	0/0:14,0:13:42.14:0,42,786
chr10	93281058	.	G	GGCGA	521.33	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.858;DP=623;FS=3.226;HRun=0;HaplotypeScore=106.4565;InbreedingCoeff=0.8730;MQ=73.26;MQ0=0;MQRankSum=-2.073;QD=52.13;ReadPosRankSum=0.174;VQSLOD=4.5909;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,138,2362	0/0:10,0:10:24.08:0,24,418	0/0:11,0:11:12.51:0,13,195	0/0:10,0:10:6.01:0,6,88	0/0:17,0:17:30.10:0,30,523	0/0:20,0:20:51.16:0,51,863	0/0:37,0:37:99:0,102,1734	0/0:21,0:21:57.16:0,57,915	0/0:17,0:17:45.15:0,45,795	0/0:18,0:18:39.13:0,39,679	0/0:12,0:12:27.08:0,27,449	0/0:37,0:37:99:0,105,1811	0/0:20,0:20:43.03:0,43,733	0/0:23,0:23:63.21:0,63,1087	0/0:18,0:18:39.13:0,39,689	0/0:16,0:16:45.15:0,45,795	0/0:37,0:36:99:0,111,1920	0/0:37,0:37:99:0,102,1764	0/0:22,0:22:48.14:0,48,781	0/0:10,0:10:21.07:0,21,371	0/0:51,0:51:99:0,135,2194	0/0:18,0:18:36.12:0,36,636	0/0:11,0:11:24.08:0,24,423	0/0:35,0:35:99:0,105,1855	0/0:15,0:15:45.15:0,45,795	0/0:23,0:23:60.19:0,60,1007	0/0:17,0:17:48.16:0,48,847	1/1:1,9:10:24.08:615,24,0
chr10	93283545	.	G	GA	5462.54	PASS	AB=0.962;AC=27;AF=0.482;AN=56;BaseQRankSum=-9.135;DP=514;FS=1.653;HRun=10;HaplotypeScore=61.8938;InbreedingCoeff=0.9133;MQ=79.15;MQ0=0;MQRankSum=-1.084;QD=19.44;ReadPosRankSum=0.238;VQSLOD=5.5500;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,2:37:24.95:0,25,618	0/0:7,0:7:17.97:0,18,148	0/1:24,0:21:10.54:11,0,122	0/0:12,0:12:6.47:0,6,99	1/1:3,16:19:39.06:404,39,0	0/0:25,0:26:70.94:0,71,569	0/0:15,0:16:44.30:0,44,347	1/1:10,19:29:13.68:528,14,0	1/1:3,16:19:48.12:511,48,0	1/1:9,16:25:23.42:435,23,0	1/1:5,13:18:33:327,33,0	0/0:13,0:13:35.96:0,36,296	0/0:9,0:9:26.96:0,27,219	0/0:17,0:17:35.94:0,36,296	0/0:13,0:13:32.92:0,33,265	1/1:2,5:8:17.91:175,18,0	0/0:24,0:25:58.93:0,59,470	1/1:2,28:32:77.93:797,78,0	1/1:4,8:13:29.18:317,29,0	1/1:4,11:16:35.92:366,36,0	1/1:0,13:15:44.78:444,45,0	0/0:17,0:17:18.59:0,19,269	0/0:12,0:12:20.88:0,21,169	0/0:17,0:17:41.93:0,42,345	0/0:12,0:12:29.95:0,30,246	1/1:8,20:28:54.14:575,54,0	1/1:3,15:19:41.84:413,42,0	1/1:0,1:15:28.71:161,29,0
chr10	93283841	.	GC	G	11782.96	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=9.385;DP=546;FS=2.085;HRun=5;HaplotypeScore=55.7201;InbreedingCoeff=0.9980;MQ=80.43;MQ0=0;MQRankSum=-3.539;QD=30.21;ReadPosRankSum=2.502;VQSLOD=5.4666;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,38:41:99:1191,105,0	1/1:0,10:10:27.04:293,27,0	0/0:10,0:10:22.83:0,23,260	0/0:19,0:19:38.81:0,39,508	1/1:0,17:17:42.12:476,42,0	1/1:0,28:28:78.22:884,78,0	1/1:1,14:15:39.11:442,39,0	1/1:4,19:23:54.15:612,54,0	1/1:0,21:21:57.16:646,57,0	1/1:1,20:21:53.81:605,54,0	1/1:2,13:15:39.11:442,39,0	0/0:14,0:14:42.13:0,42,559	0/0:23,0:23:69.23:0,69,942	0/0:28,0:28:84.24:0,84,1127	1/1:0,19:19:54.15:613,54,0	1/1:0,13:13:36.10:408,36,0	1/1:0,34:34:96.27:1089,96,0	1/1:1,20:21:57.16:647,57,0	1/1:1,16:17:48.14:544,48,0	1/1:0,15:15:42.12:476,42,0	1/1:1,33:34:84.24:953,84,0	0/0:13,0:13:39.11:0,39,503	0/0:12,0:12:36.11:0,36,477	0/0:24,0:24:63.21:0,63,860	0/0:13,0:13:36.12:0,36,492	1/1:0,24:24:69.20:782,69,0	1/1:0,16:16:42.12:476,42,0	1/1:0,6:6:18.05:204,18,0
chr10	93285296	.	A	ATGTGTG	1029.03	PASS	AB=0.881;AC=20;AF=0.435;AN=46;BaseQRankSum=0.194;DP=418;FS=2.030;HRun=0;HaplotypeScore=86.9937;InbreedingCoeff=0.4693;MQ=48.50;MQ0=34;MQRankSum=-3.262;QD=6.77;ReadPosRankSum=-1.097;VQSLOD=1.4734;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:2,0:2:0.47:0,0,1	0/0:29,0:9:20.55:0,21,278	0/0:35,0:17:10.84:0,11,263	./.	1/1:12,0:10:3:25,3,0	0/0:12,0:8:2.99:0,3,24	./.	0/1:7,0:5:0:0,0,0	1/1:15,0:13:3.01:46,3,0	1/1:3,0:3:3.01:64,3,0	0/0:23,0:19:27.07:0,27,497	0/0:26,0:26:44.56:0,45,1115	0/0:26,0:25:16.13:0,16,864	./.	1/1:3,3:5:9.03:300,9,0	1/1:14,0:12:5.95:104,6,0	0/1:11,0:11:34.87:162,0,35	1/1:7,0:4:2.74:12,3,0	1/1:6,4:9:3.01:100,3,0	0/1:35,8:35:0.04:1,0,0	0/0:20,0:16:26.29:0,26,468	0/0:8,0:7:9.03:0,9,190	0/0:32,0:29:42.11:0,42,782	0/0:16,0:15:15.05:0,15,295	1/1:10,0:8:3.01:70,3,0	0/1:6,5:12:29.89:288,0,30	./.
chr10	93285311	.	TGCAGGGCCTCTCTATCCATGAGAGA	T	229.40	PASS	AB=1.000;AC=11;AF=0.212;AN=52;BaseQRankSum=0.891;DP=347;FS=9.020;HRun=0;HaplotypeScore=140.5085;InbreedingCoeff=0.2775;MQ=48.43;MQ0=22;MQRankSum=-1.551;QD=5.33;ReadPosRankSum=-2.795;VQSLOD=1.0271;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:5:11.07:0,11,224	0/0:4,0:3:1.95:0,2,6	0/0:27,0:10:29.92:0,30,559	0/0:34,0:13:27.65:0,28,454	./.	0/1:7,0:6:15.95:16,0,284	0/0:11,0:8:15.03:0,15,497	./.	0/0:6,0:5:5.94:0,6,83	1/1:6,0:3:3.01:46,3,0	1/1:2,0:2:3.01:64,3,0	0/0:19,0:15:27.14:0,27,1805	0/0:26,0:24:66.19:0,66,4700	0/0:28,0:26:61.09:0,61,4065	0/0:9,0:6:5.93:0,6,291	0/0:6,0:4:2.47:0,2,172	0/0:9,0:3:6.02:0,6,129	0/1:9,0:8:99:136,0,176	0/0:6,0:2:3.01:0,3,34	1/1:3,0:3:2.50:9,2,0	0/0:29,0:20:3.74:0,4,20	0/0:16,0:13:24.08:0,24,1374	0/0:10,0:8:12.04:0,12,598	0/0:30,0:24:47.35:0,47,3330	0/0:12,0:11:21.07:0,21,854	1/1:6,0:5:3.01:70,3,0	0/1:10,0:9:17.74:18,0,333	0/0:2,0:2:3.01:0,3,108
chr10	93285330	.	TGAGA	T	362.79	PASS	AB=0.700;AC=11;AF=0.250;AN=44;BaseQRankSum=3.623;DP=314;FS=0.000;HRun=0;HaplotypeScore=54.9969;InbreedingCoeff=0.5398;MQ=39.66;MQ0=60;MQRankSum=-3.787;QD=9.55;ReadPosRankSum=-0.178;VQSLOD=2.1044;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:9:7.37:0,7,41	1/1:3,0:2:2.57:10,3,0	0/0:26,0:4:8.82:0,9,125	0/0:36,0:4:6.02:0,6,96	./.	0/0:6,0:6:10.98:0,11,55	0/0:9,0:8:13.48:0,13,57	0/0:2,1:3:5.99:0,6,74	1/1:2,2:3:6.02:113,6,0	./.	./.	0/0:20,0:13:11.47:0,11,265	0/0:23,0:18:39.99:0,40,768	0/0:25,0:21:41.99:0,42,768	0/0:9,0:5:5.03:0,5,33	0/1:4,2:5:10.95:104,0,11	1/1:3,2:2:5.61:67,6,0	1/1:4,3:6:6.53:167,7,0	1/1:6,0:3:3.01:33,3,0	./.	0/0:14,7:13:3.01:0,3,56	0/0:13,0:9:15.02:0,15,209	0/0:12,0:8:6.91:0,7,116	0/0:27,0:22:36.02:0,36,681	0/0:8,0:6:14.66:0,15,129	./.	./.	0/0:5,0:5:15.05:0,15,273
chr10	93285336	.	A	AGT	173.60	PASS	AB=0.937;AC=11;AF=0.262;AN=42;BaseQRankSum=-0.817;DP=365;FS=1.473;HRun=0;HaplotypeScore=53.9766;InbreedingCoeff=0.0568;MQ=35.32;MQ0=65;MQRankSum=1.190;QD=1.20;ReadPosRankSum=-1.634;VQSLOD=1.2447;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:10:8.82:0,9,56	1/1:5,0:3:5.03:31,5,0	./.	./.	./.	0/1:7,0:7:13.29:13,0,36	0/0:12,0:10:4.44:0,4,87	0/0:4,0:3:2.88:0,3,15	0/0:6,0:4:5.85:0,6,34	0/0:5,0:2:3:0,3,25	./.	1/1:22,1:17:5.86:63,6,0	0/1:21,1:18:36.09:78,0,36	0/1:21,1:19:3.04:3,0,89	0/0:10,0:6:5.89:0,6,39	0/0:7,0:5:5.85:0,6,34	0/1:10,0:3:1.93:2,0,10	0/0:12,0:10:14.72:0,15,92	0/1:12,0:4:6.61:14,0,7	0/0:5,0:4:2.92:0,3,17	0/0:32,0:22:5.93:0,6,41	./.	./.	0/1:19,4:24:21.43:86,0,21	0/0:11,0:8:2.96:0,3,19	0/1:10,0:3:0:0,0,0	./.	0/0:5,0:5:14.62:0,15,86
chr10	93285440	.	AGT	A	113.02	PASS	AB=0.922;AC=11;AF=0.275;AN=40;BaseQRankSum=2.815;DP=459;FS=0.000;HRun=0;HaplotypeScore=62.0016;InbreedingCoeff=0.1815;MQ=36.56;MQ0=87;MQRankSum=-1.293;QD=0.85;ReadPosRankSum=-1.344;VQSLOD=0.9816;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,5:16:8.85:83,9,0	1/1:4,4:5:1.25:3,1,0	./.	./.	0/0:5,0:4:3.01:0,3,45	./.	0/0:22,0:15:15.05:0,15,232	./.	0/1:13,0:9:8.07:8,0,36	./.	./.	0/0:13,0:13:15.05:0,15,231	0/0:23,0:22:10.39:0,10,526	0/1:16,1:15:1.39:1,0,402	1/1:16,2:16:11.53:76,12,0	0/0:8,0:9:5.74:0,6,49	0/1:6,4:6:25.50:26,0,36	0/1:14,0:11:13.63:14,0,67	./.	0/0:10,0:5:0:0,0,0	0/0:37,0:19:2.97:0,3,20	0/0:14,0:14:12.04:0,12,186	0/0:7,0:7:2.99:0,3,24	0/0:25,0:20:33.11:0,33,508	0/1:18,1:15:20.84:21,0,161	0/0:24,0:17:0.47:0,0,1	./.	0/0:8,0:7:6.01:0,6,60
chr10	93285487	.	TGA	T	513.37	PASS	AB=0.943;AC=18;AF=0.429;AN=42;BaseQRankSum=2.234;DP=440;FS=16.711;HRun=0;HaplotypeScore=52.1419;InbreedingCoeff=0.2290;MQ=25.32;MQ0=169;MQRankSum=-3.616;QD=3.15;ReadPosRankSum=1.777;VQSLOD=0.2469;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:7:5.87:36,6,0	0/0:6,0:4:0.54:0,1,3	./.	./.	./.	0/1:14,0:4:0:0,0,0	0/1:20,0:13:13.99:19,0,14	0/0:20,0:1:3.01:0,3,53	0/1:8,1:7:3.54:89,0,4	1/1:12,1:2:3.01:43,3,0	./.	0/0:13,0:6:8.99:0,9,78	0/0:25,0:18:19.71:0,20,244	0/0:24,0:11:17.16:0,17,142	0/1:11,0:5:11.98:12,0,21	0/1:11,2:8:9.07:76,0,9	0/0:27,4:17:5.54:0,6,150	1/1:9,5:7:15.03:179,15,0	./.	./.	./.	1/1:12,0:6:1.01:13,1,0	0/0:10,0:4:3.01:0,3,55	0/0:29,0:17:23.12:0,23,257	0/0:13,0:5:4.27:0,4,63	1/1:9,3:3:6.02:81,6,0	1/1:6,2:4:2.96:25,3,0	0/1:7,1:5:29.56:73,0,30
chr10	93285489	.	AGAGT	A	243.82	PASS	AB=0.938;AC=14;AF=0.292;AN=48;BaseQRankSum=2.796;DP=450;FS=16.561;HRun=0;HaplotypeScore=54.4723;InbreedingCoeff=0.2258;MQ=25.35;MQ0=170;MQRankSum=-3.226;QD=1.94;ReadPosRankSum=1.835;VQSLOD=-0.5874;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:7:5.87:36,6,0	0/0:5,0:4:1.26:0,1,29	./.	./.	./.	0/0:15,0:5:0.47:0,0,1	0/1:19,0:12:13.99:19,0,14	0/0:17,0:1:3.01:0,3,78	0/1:6,3:7:6.40:118,0,6	0/0:12,2:3:1.54:0,2,33	./.	0/0:14,0:6:9.01:0,9,142	0/0:25,0:17:23.90:0,24,373	0/0:24,0:12:17.16:0,17,171	0/1:10,0:3:11.97:12,0,46	0/0:11,3:9:1.37:0,1,62	0/0:33,0:19:24.74:0,25,292	1/1:12,2:7:10.85:98,11,0	0/0:8,0:1:3:0,3,29	0/0:3,1:1:3.01:0,3,33	0/0:24,0:9:0:0,0,0	1/1:14,0:7:1.02:13,1,0	0/0:12,0:5:3.01:0,3,84	0/0:29,0:18:23.03:0,23,343	0/0:12,0:4:4.25:0,4,92	1/1:11,1:3:3.63:10,4,0	1/1:7,2:5:2.98:59,3,0	0/1:9,0:6:9.68:10,0,118
chr10	93285556	.	T	TGTGA	475.18	PASS	AB=0.892;AC=9;AF=0.188;AN=48;BaseQRankSum=-2.098;DP=530;FS=12.571;HRun=0;HaplotypeScore=52.5304;InbreedingCoeff=-0.0582;MQ=23.69;MQ0=217;MQRankSum=-2.098;QD=2.97;ReadPosRankSum=-0.750;VQSLOD=-0.4816;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:12:6.01:0,6,64	0/0:8,0:4:2.96:0,3,19	./.	./.	./.	0/1:17,0:8:15:15,0,70	0/1:21,0:7:0:0,0,0	0/1:11,3:4:11.07:55,0,11	0/1:12,0:8:13.19:26,0,13	0/1:14,7:10:18.99:217,0,19	./.	0/0:22,0:7:2.96:0,3,19	0/0:23,0:16:25.07:0,25,227	0/0:15,0:8:8.98:0,9,72	0/0:22,0:7:5.94:0,6,43	0/0:17,1:7:5.95:0,6,44	0/0:20,0:10:17.87:0,18,129	0/0:8,0:3:2.99:0,3,23	0/1:9,4:4:9.94:169,0,10	0/0:17,0:4:3:0,3,25	1/1:38,1:14:1.86:35,2,0	0/0:17,0:7:2.52:0,3,43	0/0:11,0:6:2.99:0,3,24	0/0:37,0:17:21.02:0,21,291	0/0:17,0:6:5.48:0,5,81	0/1:20,1:9:45.93:75,0,46	0/0:8,1:2:0.87:0,1,2	0/0:11,0:4:8.96:0,9,69
chr10	93285603	.	A	AGT	84.08	PASS	AB=0.914;AC=6;AF=0.115;AN=52;BaseQRankSum=1.624;DP=377;FS=5.296;HRun=0;HaplotypeScore=50.7116;InbreedingCoeff=0.0227;MQ=38.35;MQ0=89;MQRankSum=-1.845;QD=1.59;ReadPosRankSum=-1.986;VQSLOD=0.3690;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:19:44.55:0,45,626	0/0:6,0:4:6.02:0,6,92	0/0:26,0:4:11.96:0,12,113	0/0:22,0:4:8.75:0,9,123	./.	./.	0/0:9,0:7:17.92:0,18,141	0/0:16,0:3:5.87:0,6,40	0/1:4,3:6:51.49:119,0,51	0/1:13,0:6:11:11,0,76	0/0:4,0:3:2.97:0,3,20	0/0:19,0:13:30.10:0,30,447	0/0:21,0:17:36.09:0,36,518	0/0:16,0:13:33.07:0,33,458	0/0:25,0:19:29.88:0,30,340	0/0:10,0:4:9.95:0,10,59	0/0:16,0:11:27.09:0,27,413	0/1:8,3:4:28.61:41,0,29	0/0:6,0:4:9:0,9,94	0/1:8,0:2:0:0,0,0	0/0:18,3:7:5.82:0,6,38	0/0:17,0:12:10.24:0,10,328	0/0:5,0:3:2.96:0,3,46	0/0:27,0:19:33.11:0,33,505	0/0:12,0:10:17.69:0,18,196	0/1:12,0:6:15.28:15,0,93	0/1:2,0:1:0:0,0,0	0/0:5,0:2:6.02:0,6,92
chr10	93285622	.	ATGTGTGTG	A	339.31	PASS	AB=0.820;AC=4;AF=0.083;AN=48;BaseQRankSum=3.902;DP=387;FS=8.028;HRun=0;HaplotypeScore=78.8764;InbreedingCoeff=-0.0502;MQ=42.16;MQ0=53;MQRankSum=-4.007;QD=9.17;ReadPosRankSum=-0.614;VQSLOD=0.9173;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:23:45.49:0,45,1871	0/0:7,0:6:14.76:0,15,366	0/0:29,0:5:12.04:0,12,322	0/0:25,0:4:11.25:0,11,242	./.	./.	0/0:10,0:8:18.06:0,18,750	0/0:12,0:3:3.01:0,3,125	0/1:8,2:8:99:151,0,240	./.	0/0:6,0:5:3.01:0,3,128	0/0:15,0:13:33.10:0,33,1334	0/0:22,0:21:48.16:0,48,1934	0/0:21,0:21:43.86:0,44,1732	0/0:27,0:24:45.51:0,46,1568	0/1:4,3:3:99:137,0,116	0/0:20,0:16:24.77:0,25,1303	0/1:10,2:5:77.29:77,0,99	0/1:7,1:4:24.57:78,0,25	0/0:6,0:3:0:0,0,0	0/0:15,6:9:3.01:0,3,125	0/0:17,0:15:27.09:0,27,1176	0/0:4,0:4:3.48:0,3,111	0/0:29,0:26:54.19:0,54,1933	0/0:18,0:15:27.09:0,27,990	0/0:7,0:5:9.01:0,9,280	./.	0/0:2,1:2:6.02:0,6,262
chr10	93285685	.	G	GTA	325.67	PASS	AB=0.973;AC=9;AF=0.167;AN=54;BaseQRankSum=-0.988;DP=500;FS=5.989;HRun=0;HaplotypeScore=81.4862;InbreedingCoeff=0.1812;MQ=39.15;MQ0=65;MQRankSum=-0.248;QD=2.61;ReadPosRankSum=-2.248;VQSLOD=0.4745;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:35:48.91:0,49,588	0/0:12,0:8:15.05:0,15,228	0/0:25,0:4:7.95:0,8,135	0/0:26,0:4:12.04:0,12,180	1/1:9,1:7:5.59:35,6,0	0/0:12,0:9:18.02:0,18,215	0/0:27,0:19:39.03:0,39,472	0/1:23,0:11:45.99:46,0,153	0/0:13,1:12:14.93:0,15,141	0/1:14,0:11:99:148,0,102	1/1:4,4:7:3.01:49,3,0	0/0:16,0:13:26.23:0,26,386	0/0:17,0:16:36.08:0,36,488	0/0:20,0:17:26.95:0,27,379	0/0:31,0:29:29:0,29,376	0/0:8,1:5:0:0,0,0	0/0:12,0:11:16.52:0,17,167	0/1:14,1:11:46.76:68,0,47	0/0:10,0:4:9:0,9,78	0/1:12,1:9:34.36:51,0,34	0/1:41,0:25:41.55:63,0,42	0/0:10,0:8:11.75:0,12,176	0/0:11,0:9:9.02:0,9,134	0/0:34,0:33:74.98:0,75,978	0/0:22,0:17:24.05:0,24,317	0/0:14,0:12:9.95:0,10,241	./.	0/0:7,0:4:2.97:0,3,20
chr10	93285722	.	ATG	A	2102.29	PASS	AB=0.795;AC=24;AF=0.444;AN=54;BaseQRankSum=1.877;DP=660;FS=13.140;HRun=0;HaplotypeScore=84.5913;InbreedingCoeff=0.5702;MQ=37.01;MQ0=101;MQRankSum=-1.995;QD=6.53;ReadPosRankSum=-0.669;VQSLOD=1.9976;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,1:33:24.07:0,24,352	0/0:16,1:13:11.87:0,12,189	0/0:31,0:4:8.70:0,9,91	0/0:25,0:6:12.51:0,13,166	1/1:7,20:17:2.82:35,3,0	0/0:13,0:6:2.92:0,3,47	0/0:31,0:19:29.88:0,30,391	1/1:23,6:17:15.04:177,15,0	0/1:9,9:13:2.73:135,0,3	1/1:17,18:29:42.12:494,42,0	1/1:12,2:9:6.01:69,6,0	0/1:21,0:18:21.25:21,0,193	0/0:16,0:15:19.27:0,19,260	0/0:16,0:14:15.05:0,15,213	0/0:31,1:30:33.08:0,33,456	1/1:9,14:17:11.91:140,12,0	0/0:17,0:13:4.21:0,4,129	1/1:8,12:18:29.42:331,29,0	1/1:13,6:6:5.98:71,6,0	./.	1/1:36,14:32:6.33:241,6,0	0/0:21,1:19:15.05:0,15,237	0/1:12,2:12:14.51:29,0,15	0/0:27,0:26:42.12:0,42,620	0/0:13,0:9:9.03:0,9,141	0/1:14,18:26:2.25:427,0,2	1/1:2,4:4:9.03:106,9,0	1/1:5,4:6:2.84:14,3,0
chr10	93285819	.	A	AGT	2914.72	PASS	AB=0.852;AC=23;AF=0.426;AN=54;BaseQRankSum=-3.339;DP=558;FS=4.186;HRun=0;HaplotypeScore=96.5318;InbreedingCoeff=0.0193;MQ=40.73;MQ0=94;MQRankSum=-1.930;QD=8.38;ReadPosRankSum=-0.591;VQSLOD=3.1598;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,3:11:3.01:47,3,0	1/1:8,0:6:9:95,9,0	0/0:24,0:3:9.02:0,9,93	0/0:32,0:6:4.63:0,5,67	1/1:9,5:12:8.87:141,9,0	1/1:4,0:2:3.01:39,3,0	1/1:14,8:20:13.04:615,13,0	0/1:32,7:19:99:238,0,271	0/1:13,6:14:26.24:85,0,26	0/1:14,4:14:89.53:253,0,90	0/1:8,0:8:36.45:36,0,61	0/0:18,0:18:20.89:0,21,224	0/0:17,0:17:33.07:0,33,367	0/0:20,0:19:33.10:0,33,387	./.	0/1:11,8:11:49.23:187,0,49	0/0:11,0:12:11.87:0,12,119	0/1:20,6:25:99:241,0,107	0/1:19,1:12:22.75:23,0,200	1/1:1,4:5:3.01:47,3,0	0/1:44,22:56:71.69:793,0,72	0/0:18,0:15:6:0,6,70	0/0:11,0:10:18.05:0,18,211	0/0:30,0:27:38.95:0,39,433	0/0:13,0:11:11.56:0,12,117	0/1:27,4:22:99:156,0,213	0/1:14,4:11:60.54:80,0,61	0/1:11,0:11:7.60:8,0,95
chr10	93285830	.	G	GTA	1335.73	PASS	AB=0.971;AC=16;AF=0.286;AN=56;BaseQRankSum=3.231;DP=557;FS=3.840;HRun=0;HaplotypeScore=106.1968;InbreedingCoeff=-0.2485;MQ=40.70;MQ0=84;MQRankSum=-1.202;QD=4.20;ReadPosRankSum=4.882;VQSLOD=2.1774;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:12:16.19:16,0,53	1/1:7,0:5:7.60:43,8,0	0/0:19,0:3:9.03:0,9,132	0/0:27,0:6:5.97:0,6,148	0/1:15,0:13:48.58:49,0,119	0/1:4,1:3:12.97:51,0,13	0/1:16,7:20:39.20:547,0,39	0/1:34,0:18:79.25:79,0,406	0/1:16,0:11:45.57:46,0,56	0/1:20,0:14:72.04:72,0,188	0/1:10,0:9:2.52:3,0,146	0/0:21,0:20:35.96:0,36,413	0/0:18,0:18:42.04:0,42,564	0/0:21,0:20:39.09:0,39,549	0/0:10,0:5:2.99:0,3,23	0/1:20,0:12:86.37:86,0,115	0/0:12,0:11:23.84:0,24,238	0/1:28,0:27:66.11:66,0,286	0/0:24,0:13:14.24:0,14,337	0/1:7,0:7:16.22:16,0,17	0/1:73,0:57:99:345,0,197	0/0:17,0:14:18:0,18,191	0/0:11,0:9:21.06:0,21,299	0/0:33,0:29:57.78:0,58,691	0/0:16,0:12:24.01:0,24,262	0/1:27,0:19:40.45:40,0,390	0/1:17,0:10:33.46:33,0,118	0/0:10,0:10:24.39:0,24,236
chr10	93285876	.	AGT	A	437.78	PASS	AB=0.983;AC=14;AF=0.269;AN=52;BaseQRankSum=-2.655;DP=498;FS=10.697;HRun=0;HaplotypeScore=86.5393;InbreedingCoeff=0.5905;MQ=46.10;MQ0=55;MQRankSum=1.449;QD=3.00;ReadPosRankSum=1.378;VQSLOD=0.9018;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:12:6.83:0,7,202	0/0:4,0:4:3.01:0,3,47	0/0:23,0:5:6.02:0,6,88	0/1:27,1:8:19.17:19,0,130	0/0:18,0:18:12.02:0,12,164	0/1:3,0:4:0:0,0,0	1/1:12,0:9:3.56:13,4,0	0/0:28,0:11:26.80:0,27,336	0/0:12,0:11:15.05:0,15,232	0/0:12,0:8:2.56:0,3,45	0/0:7,1:7:3.01:0,3,47	1/1:10,10:16:9.03:104,9,0	1/1:7,12:18:9.03:104,9,0	1/1:13,8:19:6.02:70,6,0	0/0:14,0:11:12.51:0,13,187	0/0:22,0:18:18.20:0,18,235	0/0:3,0:3:0.89:0,1,2	0/0:30,0:26:63.21:0,63,980	0/0:26,0:10:10.31:0,10,159	0/0:10,0:8:15.05:0,15,234	0/0:69,1:47:33.02:0,33,410	./.	./.	1/1:9,19:24:20.61:243,21,0	1/1:9,4:10:3.89:37,4,0	0/0:19,0:13:24.03:0,24,316	0/0:16,0:10:11.88:0,12,161	0/0:8,0:7:12.04:0,12,184
chr10	93285923	.	A	AGT	3065.70	PASS	AB=0.742;AC=26;AF=0.542;AN=48;BaseQRankSum=0.456;DP=445;FS=2.308;HRun=0;HaplotypeScore=64.9318;InbreedingCoeff=0.6777;MQ=41.14;MQ0=73;MQRankSum=-2.680;QD=11.35;ReadPosRankSum=3.206;VQSLOD=3.4562;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:25,0:4:9.02:0,9,103	0/0:15,0:3:9.03:0,9,105	1/1:9,4:13:9.03:135,9,0	0/0:3,0:3:0:0,0,0	./.	1/1:22,14:13:21.07:336,21,0	1/1:5,2:5:12.02:163,12,0	1/1:6,6:9:18.06:288,18,0	1/1:5,4:7:3.01:48,3,0	0/0:20,0:17:19.61:0,20,216	0/0:18,0:17:21.06:0,21,252	0/0:15,0:14:15.04:0,15,176	1/1:8,0:7:2.04:6,2,0	0/1:12,10:17:2.88:445,0,3	./.	1/1:18,8:23:39.11:571,39,0	1/1:16,3:6:9.03:144,9,0	1/1:12,2:8:12.04:180,12,0	0/1:44,15:43:36.32:420,0,36	0/0:10,0:10:21.06:0,21,252	0/0:5,0:3:7.26:0,7,75	0/0:34,0:28:39.54:0,40,448	0/0:11,0:7:9.03:0,9,108	1/1:16,3:12:15.01:196,15,0	1/1:12,6:11:15.05:240,15,0	1/1:5,0:4:6:71,6,0
chr10	93285938	.	G	GTGTA	502.86	PASS	AB=0.963;AC=22;AF=0.440;AN=50;BaseQRankSum=6.609;DP=404;FS=3.359;HRun=0;HaplotypeScore=76.5790;InbreedingCoeff=0.2785;MQ=41.82;MQ0=70;MQRankSum=-2.967;QD=2.13;ReadPosRankSum=1.236;VQSLOD=1.4464;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:21,0:4:9.01:0,9,134	0/0:17,0:3:9.03:0,9,162	0/1:13,0:13:16.93:17,0,17	0/1:3,0:3:0:0,0,0	./.	0/1:29,0:10:20.69:21,0,34	0/1:9,1:8:3.88:117,0,4	0/1:15,0:11:1.86:2,0,36	1/1:10,0:8:0.89:2,1,0	0/0:18,0:17:34.28:0,34,444	0/0:16,0:15:26.96:0,27,430	0/0:13,0:12:18.05:0,18,309	1/1:6,0:3:0.47:1,0,0	0/1:16,0:14:10.52:11,0,44	0/0:6,0:4:2.94:0,3,18	1/1:17,1:16:8.72:207,9,0	1/1:16,0:4:2.66:7,3,0	1/1:11,0:10:7.72:46,8,0	0/1:49,2:38:41.06:41,0,94	0/0:14,0:14:28.97:0,29,444	0/0:4,0:4:6.91:0,7,116	0/0:35,0:27:48:0,48,731	0/0:10,0:9:9.03:0,9,171	1/1:10,0:9:12.74:90,13,0	0/1:15,0:9:3.29:3,0,15	1/1:5,1:4:4.83:86,5,0
chr10	93285962	.	AGTGT	A	714.43	PASS	AB=0.982;AC=29;AF=0.537;AN=54;BaseQRankSum=5.312;DP=342;FS=21.292;HRun=0;HaplotypeScore=55.9054;InbreedingCoeff=0.4997;MQ=36.97;MQ0=59;MQRankSum=-2.389;QD=4.38;ReadPosRankSum=0.183;VQSLOD=-0.1805;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:2:2.94:18,3,0	1/1:6,0:3:0.89:2,1,0	0/0:26,0:3:6.02:0,6,130	0/0:26,0:6:17.94:0,18,261	1/1:7,0:6:3.01:42,3,0	./.	1/1:6,1:6:3.01:44,3,0	1/1:15,0:4:3.01:38,3,0	0/1:13,0:11:4.26:88,0,4	1/1:11,0:7:11.61:69,12,0	1/1:5,0:4:2.80:13,3,0	0/0:20,0:20:48.15:0,48,1006	0/0:15,0:14:32.97:0,33,546	0/0:14,0:15:27.03:0,27,513	0/0:5,0:2:2.80:0,3,13	1/1:12,1:10:11.75:112,12,0	0/0:3,1:2:2.60:0,3,10	1/1:9,1:7:4.91:103,5,0	0/1:12,0:5:15.37:18,0,15	1/1:3,0:3:3.45:22,3,0	0/1:33,2:24:0.07:143,0,0	0/0:14,0:13:29.65:0,30,439	0/0:12,0:12:18.04:0,18,359	0/0:32,0:26:39.12:0,39,847	0/0:9,0:8:2.97:0,3,70	1/1:8,0:4:8.98:96,9,0	1/1:7,2:5:5.99:51,6,0	1/1:3,0:1:2.99:24,3,0
chr10	93285977	.	GTA	G	1188.14	PASS	AB=0.922;AC=31;AF=0.620;AN=50;BaseQRankSum=4.534;DP=377;FS=3.109;HRun=0;HaplotypeScore=60.7874;InbreedingCoeff=0.1618;MQ=38.58;MQ0=41;MQRankSum=-2.587;QD=4.66;ReadPosRankSum=-2.419;VQSLOD=1.3896;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:6,1:4:2.96:19,3,0	0/1:29,0:6:41.37:41,0,50	0/1:28,0:11:9.26:9,0,104	1/1:6,2:8:2.98:22,3,0	./.	1/1:8,0:6:2.90:16,3,0	1/1:9,0:2:2.94:18,3,0	1/1:5,7:10:10.36:279,10,0	1/1:10,2:7:17.15:167,17,0	0/1:5,2:6:18.96:19,0,19	0/0:24,0:23:19.52:0,20,558	0/1:12,1:13:36.46:36,0,216	0/0:18,0:18:3.55:0,4,292	0/0:5,0:2:2.60:0,3,10	1/1:7,4:9:15.44:140,15,0	1/1:4,1:2:3.01:45,3,0	1/1:10,4:9:1.83:107,2,0	0/1:13,1:9:14.78:92,0,15	1/1:3,0:3:5.96:43,6,0	1/1:29,9:26:9.89:127,10,0	0/0:19,0:17:5.28:0,5,217	0/0:12,0:12:14.88:0,15,178	0/0:36,0:30:39.05:0,39,578	0/1:13,0:11:9.39:9,0,72	0/1:10,3:7:7.11:114,0,7	1/1:8,3:6:5.94:42,6,0	./.
chr10	93286023	.	A	AGT	1376.40	PASS	AB=0.938;AC=20;AF=0.435;AN=46;BaseQRankSum=-5.043;DP=477;FS=0.000;HRun=0;HaplotypeScore=81.3627;InbreedingCoeff=0.0098;MQ=40.64;MQ0=70;MQRankSum=2.885;QD=5.10;ReadPosRankSum=-1.687;VQSLOD=2.0184;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/1:9,0:6:8.13:18,0,8	./.	./.	1/1:12,0:10:2.94:18,3,0	1/1:7,0:6:3:26,3,0	0/1:18,0:15:3.75:99,0,4	1/1:24,0:11:0.47:1,0,0	0/1:17,0:13:10.95:11,0,78	0/1:23,0:17:27.42:103,0,27	0/1:9,1:10:35.04:58,0,35	./.	0/0:7,0:8:3.48:0,3,34	0/0:15,0:18:4.24:0,4,18	0/0:7,0:4:2.92:0,3,17	1/1:8,7:15:0.15:374,0,0	0/0:5,0:3:3.84:0,4,21	0/1:16,5:17:1.78:222,0,2	1/1:17,1:12:6.01:72,6,0	0/0:11,0:9:2.99:0,3,24	0/1:48,3:38:24.93:207,0,25	0/0:6,0:6:2.84:0,3,14	./.	0/0:23,0:19:9.50:0,9,99	0/0:10,0:10:2.84:0,3,14	1/1:26,1:18:16.34:206,16,0	0/1:12,1:10:32.82:94,0,33	0/0:4,0:4:5.68:0,6,28
chr10	93286084	.	AGT	A	753.73	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=7.817;DP=672;FS=4.445;HRun=0;HaplotypeScore=110.9964;InbreedingCoeff=0.7505;MQ=48.26;MQ0=66;MQRankSum=-1.674;QD=5.31;ReadPosRankSum=1.637;VQSLOD=3.0266;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,15:25:24.43:289,24,0	1/1:12,7:15:12.03:131,12,0	0/0:34,1:9:21.03:0,21,255	0/1:40,0:9:11.69:12,0,162	0/0:17,0:14:15.01:0,15,196	0/1:15,0:11:1.40:1,0,49	0/0:31,0:23:3.05:0,3,171	0/0:18,0:8:21.07:0,21,346	0/0:25,0:22:47.85:0,48,666	0/0:28,0:22:48.27:0,48,622	0/0:17,1:17:36.10:0,36,583	0/0:17,0:14:36.01:0,36,509	0/0:21,0:19:39.48:0,39,555	0/0:22,0:17:34.99:0,35,572	1/1:16,8:18:15.50:168,16,0	0/0:21,0:20:36.10:0,36,529	1/1:10,5:12:27.03:312,27,0	0/0:23,0:23:43.83:0,44,630	0/0:12,0:9:26.78:0,27,351	0/0:24,0:21:36.12:0,36,582	0/0:58,0:46:77.64:0,78,1332	0/0:23,0:19:39.06:0,39,570	0/0:18,0:17:30.05:0,30,463	0/0:34,0:25:36.59:0,37,564	0/0:24,0:21:26.22:0,26,372	0/0:32,0:28:56.41:0,56,798	0/0:20,0:17:16.25:0,16,289	0/0:9,0:9:20.95:0,21,217
chr10	93286100	.	AGT	A	502.12	PASS	AB=0.962;AC=10;AF=0.179;AN=56;BaseQRankSum=5.770;DP=693;FS=2.385;HRun=0;HaplotypeScore=107.7345;InbreedingCoeff=0.4586;MQ=49.94;MQ0=39;MQRankSum=1.001;QD=3.10;ReadPosRankSum=1.138;VQSLOD=2.5406;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,22:34:24.42:278,24,0	1/1:9,4:9:8.85:91,9,0	0/0:29,0:8:8.75:0,9,77	0/0:49,0:11:16.06:0,16,153	0/0:17,0:14:7.41:0,7,314	0/0:17,0:13:5.49:0,5,35	0/0:34,0:27:12.51:0,13,98	0/0:15,0:13:32.47:0,32,485	0/0:27,0:26:57.02:0,57,833	0/1:25,1:22:26.57:27,0,554	0/0:21,0:20:39.09:0,39,550	0/0:19,0:18:38.15:0,38,665	0/0:18,0:18:43.74:0,44,584	0/0:23,0:21:40.90:0,41,640	1/1:7,11:14:15.52:178,16,0	0/1:20,0:18:3.82:4,0,394	0/0:18,0:17:22.82:0,23,135	0/0:26,0:26:13.12:0,13,646	0/0:13,0:8:18.06:0,18,266	0/0:19,0:17:41.88:0,42,610	0/0:74,0:62:99:0,103,1734	0/0:27,0:24:42.14:0,42,640	0/0:20,1:21:13.44:0,13,505	0/1:30,2:27:62.07:62,0,558	0/0:23,0:21:26.82:0,27,421	0/0:29,0:26:22.08:0,22,794	0/1:16,1:14:15.84:16,0,253	0/0:8,0:8:18.03:0,18,250
chr10	93286117	.	G	GTGTGGT	317.85	PASS	AB=0.800;AC=4;AF=0.071;AN=56;BaseQRankSum=2.102;DP=715;FS=2.406;HRun=0;HaplotypeScore=150.5290;InbreedingCoeff=0.4413;MQ=50.15;MQ0=40;MQRankSum=-0.489;QD=6.00;ReadPosRankSum=-2.915;VQSLOD=2.0008;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:44.98:0,45,605	0/1:7,0:7:8.91:9,0,77	0/0:46,0:13:23.91:0,24,267	0/0:53,0:18:14.51:0,15,362	0/0:15,0:13:27.09:0,27,531	0/1:4,8:11:20.18:106,0,20	1/1:8,21:30:15.57:312,16,0	0/0:23,0:20:50.95:0,51,720	0/0:26,0:27:61.34:0,61,1306	0/0:21,0:24:61.57:0,62,1132	0/0:22,0:22:10.86:0,11,756	0/0:23,0:22:21.97:0,22,1028	0/0:17,0:18:51.17:0,51,994	0/0:24,0:25:69.18:0,69,1257	0/0:14,0:10:15.05:0,15,272	0/0:15,0:16:42.12:0,42,772	0/0:9,0:22:13.48:0,13,197	0/0:22,0:22:60.15:0,60,1149	0/0:16,0:9:27.03:0,27,413	0/0:26,0:26:60.11:0,60,995	0/0:77,0:71:99:0,168,3242	0/0:20,0:19:42.36:0,42,887	0/0:19,0:19:44.74:0,45,860	0/0:32,0:29:56.98:0,57,1192	0/0:17,0:16:30.38:0,30,632	0/0:36,0:33:84.25:0,84,1432	0/0:14,0:12:27.09:0,27,516	0/0:8,0:7:21.07:0,21,397
chr10	93286266	.	AG	A	11379.37	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=13.073;DP=693;FS=0.905;HRun=2;HaplotypeScore=84.6174;InbreedingCoeff=0.9969;MQ=89.22;MQ0=0;MQRankSum=-1.962;QD=35.67;ReadPosRankSum=0.486;VQSLOD=5.1237;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.26:0,81,1192	0/0:10,0:9:27.09:0,27,395	0/0:25,0:25:68.92:0,69,921	0/0:31,0:31:89.89:0,90,1215	1/1:0,5:5:15.05:191,15,0	0/0:19,0:19:57.19:0,57,851	0/0:37,0:37:99:0,105,1544	1/1:4,29:33:84.24:1062,84,0	1/1:0,29:29:78.25:1013,78,0	1/1:2,27:29:81.26:1052,81,0	1/1:0,14:13:33.11:428,33,0	0/0:20,0:20:57.19:0,57,852	0/0:24,0:24:72.24:0,72,1070	0/0:37,0:36:99:0,108,1613	0/0:24,0:24:66.22:0,66,989	1/1:1,22:23:63.07:818,63,0	0/0:41,0:41:99:0,123,1818	1/1:0,23:23:66.21:857,66,0	1/1:0,17:17:51.17:661,51,0	1/1:0,16:16:48.16:623,48,0	1/1:5,80:85:99:3087,241,0	0/0:13,0:12:33.10:0,33,471	0/0:10,0:10:27.09:0,27,404	0/0:30,0:29:87.29:0,87,1303	0/0:16,0:15:42.14:0,42,629	1/1:1,27:28:78.25:1003,78,0	1/1:0,17:17:45.15:585,45,0	0/0:7,0:7:21.05:0,21,294
chr10	93286888	.	G	GA	917.24	PASS	AB=0.950;AC=5;AF=0.089;AN=56;BaseQRankSum=-7.421;DP=649;FS=0.630;HRun=9;HaplotypeScore=68.9413;InbreedingCoeff=0.7107;MQ=74.67;MQ0=0;MQRankSum=-2.631;QD=15.29;ReadPosRankSum=-0.389;VQSLOD=3.6727;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,132,1146	0/0:7,0:7:17.96:0,18,151	0/0:14,0:14:23.97:0,24,206	0/0:16,0:16:26.33:0,26,253	0/0:27,0:27:68.96:0,69,595	1/1:1,14:15:34.34:368,34,0	1/1:3,22:26:61.41:667,61,0	0/0:35,0:35:65.92:0,66,568	0/0:24,0:24:59.95:0,60,521	0/0:21,0:21:56.96:0,57,487	0/0:21,0:21:59.99:0,60,521	0/0:24,0:24:71.99:0,72,625	0/0:12,0:12:29.98:0,30,260	0/0:25,0:25:68.98:0,69,599	0/0:27,0:27:65.96:0,66,573	0/0:18,0:18:47.98:0,48,416	0/0:37,0:37:98.94:0,99,856	0/0:23,0:23:59.98:0,60,521	0/0:16,0:16:41.96:0,42,361	0/0:18,2:20:0.13:0,0,363	0/0:24,0:24:42.57:0,43,524	0/0:34,0:34:83.96:0,84,729	0/0:29,0:29:77.96:0,78,673	0/0:29,0:29:77.96:0,78,672	0/0:23,0:23:53.97:0,54,468	0/0:25,0:25:62.96:0,63,547	0/1:18,1:19:8.78:9,0,317	0/0:7,0:7:17.99:0,18,156
chr10	93290475	.	CATAAT	C	481.88	PASS	AB=0.915;AC=5;AF=0.089;AN=56;BaseQRankSum=8.281;DP=718;FS=35.516;HRun=0;HaplotypeScore=188.3901;InbreedingCoeff=-0.1156;MQ=53.69;MQ0=3;MQRankSum=-5.373;QD=4.15;ReadPosRankSum=-0.673;VQSLOD=0.9209;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:74.96:0,75,1393	0/0:20,0:20:57.48:0,57,947	0/0:45,0:35:70.07:0,70,2690	0/0:25,0:18:4.91:0,5,1380	0/0:8,0:8:15.05:0,15,378	0/1:25,0:24:8.85:9,0,1108	0/0:45,0:43:32.04:0,32,1642	0/0:19,0:19:45.11:0,45,1626	0/0:25,3:29:4.21:0,4,1606	0/0:23,1:24:4.74:0,5,1837	0/0:8,2:15:12.04:0,12,349	0/0:38,0:38:99:0,114,3437	0/0:26,0:26:78.27:0,78,2499	0/0:25,0:25:72.25:0,72,2258	0/0:27,0:27:66.02:0,66,1390	0/1:16,8:24:99:237,0,731	0/0:24,0:24:51.43:0,51,1303	0/0:16,0:17:6.63:0,7,933	0/1:18,1:18:17.85:18,0,1308	0/0:17,1:17:30.10:0,30,897	0/0:26,0:26:72.20:0,72,1975	0/0:21,0:21:63.22:0,63,1998	0/0:28,0:28:81.22:0,81,2491	0/0:48,0:48:99:0,144,4333	0/0:24,0:24:69.23:0,69,2156	0/1:24,4:27:99:320,0,1471	0/1:20,0:20:9.06:9,0,1247	0/0:8,0:8:24.05:0,24,571
chr10	93290488	.	TACACACAC	T	2333.86	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.317;DP=756;FS=2.176;HRun=0;HaplotypeScore=228.7511;InbreedingCoeff=0.8671;MQ=50.54;MQ0=6;MQRankSum=-8.170;QD=25.37;ReadPosRankSum=-1.334;VQSLOD=3.2927;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,33:47:54.38:1079,54,0	1/1:6,13:20:13.02:813,13,0	0/0:44,0:27:24.47:0,24,783	0/0:23,0:16:24.08:0,24,880	0/0:11,0:11:12.04:0,12,305	0/0:25,0:24:24.08:0,24,492	0/0:42,0:40:32.98:0,33,770	0/0:32,0:30:54.11:0,54,1277	0/0:30,0:29:32.48:0,32,583	0/0:28,0:28:55.74:0,56,1416	0/0:12,0:12:3.01:0,3,100	0/0:36,0:39:87.28:0,87,2977	0/0:27,0:29:59.94:0,60,2356	0/0:21,0:23:51.18:0,51,1950	1/1:10,15:25:24.08:580,24,0	0/0:24,0:24:19.69:0,20,415	0/0:27,0:27:32.93:0,33,764	0/0:15,0:15:30.10:0,30,849	0/0:22,0:21:44.90:0,45,972	0/0:18,0:15:9.03:0,9,226	0/0:26,0:26:36.35:0,36,808	0/0:23,0:23:51.17:0,51,1832	0/0:26,0:28:54.14:0,54,1732	0/0:44,0:46:99:0,108,3905	0/0:24,0:24:51.18:0,51,2015	0/0:40,0:36:85.05:0,85,1973	0/0:16,0:26:27.09:0,27,654	0/0:7,0:7:6.02:0,6,207
chr10	93294644	.	GT	G	1598.67	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.337;DP=720;FS=9.411;HRun=1;HaplotypeScore=64.4997;InbreedingCoeff=0.9823;MQ=61.29;MQ0=6;MQRankSum=0.384;QD=35.53;ReadPosRankSum=0.883;VQSLOD=3.3338;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,172,2684	0/0:7,0:7:21.03:0,21,305	0/0:28,0:21:48.51:0,49,895	0/0:29,0:20:59.87:0,60,886	0/0:24,0:24:72.25:0,72,1146	1/1:0,23:23:66.22:923,66,0	1/1:0,22:22:57.19:797,57,0	0/0:33,0:33:99:0,99,1551	0/0:16,0:16:48.16:0,48,766	0/0:31,0:31:93.30:0,93,1446	0/0:22,0:22:66.23:0,66,1055	0/0:21,0:21:63.21:0,63,1007	0/0:29,0:29:87.30:0,87,1391	0/0:16,0:16:48.15:0,48,744	0/0:24,0:24:72.25:0,72,1138	0/0:23,0:23:69.24:0,69,1103	0/0:34,0:34:99:0,102,1570	0/0:27,0:27:81.23:0,81,1229	0/0:22,0:22:66.23:0,66,1055	0/0:36,0:35:99:0,102,1630	0/0:35,0:35:99:0,105,1674	0/0:30,0:30:90.29:0,90,1416	0/0:18,0:18:51.16:0,51,792	0/0:34,0:34:99:0,102,1608	0/0:22,0:21:66.22:0,66,1046	0/0:28,0:28:84.24:0,84,1279	0/0:25,0:25:75.24:0,75,1176	0/0:4,0:4:12.04:0,12,192
chr10	93297823	.	C	CCTCTCT	6437.24	PASS	AB=0.822;AC=38;AF=0.679;AN=56;BaseQRankSum=1.396;DP=833;FS=1.474;HRun=0;HaplotypeScore=194.1031;InbreedingCoeff=0.7925;MQ=60.68;MQ0=18;MQRankSum=-2.575;QD=10.99;ReadPosRankSum=-6.181;VQSLOD=2.0780;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:50,0:47:18.25:383,18,0	1/1:11,0:11:2.46:66,2,0	0/0:56,0:21:12.24:0,12,187	0/1:72,0:26:0.77:1,0,58	0/1:17,15:38:0:0,0,0	1/1:23,0:22:6.28:70,6,0	1/1:33,0:31:10.43:95,10,0	1/1:15,13:32:51.94:814,52,0	1/1:10,16:28:21.07:632,21,0	1/1:13,15:30:55.44:1036,55,0	1/1:12,17:33:2.37:18,2,0	0/0:24,0:26:60.14:0,60,1010	0/0:30,0:30:66.18:0,66,1227	0/0:24,0:24:42.11:0,42,709	1/1:34,0:32:23.83:313,24,0	1/1:12,10:26:12.04:336,12,0	1/1:18,0:18:11.14:73,11,0	1/1:7,8:17:9.03:177,9,0	1/1:7,8:14:23.75:511,24,0	1/1:8,21:29:5.83:136,6,0	1/1:33,2:35:35.64:577,36,0	0/0:32,0:32:60.19:0,60,1172	0/0:18,0:20:39.13:0,39,703	0/0:38,0:38:45.34:0,45,1563	0/0:21,0:21:54.16:0,54,977	1/1:16,7:28:32.94:679,33,0	1/1:9,11:22:12.04:393,12,0	1/1:9,0:10:6.02:129,6,0
chr10	93299231	.	CAA	C	1264.27	PASS	AB=0.981;AC=13;AF=0.232;AN=56;BaseQRankSum=-3.113;DP=627;FS=0.972;HRun=3;HaplotypeScore=166.1186;InbreedingCoeff=-0.1288;MQ=67.20;MQ0=1;MQRankSum=2.321;QD=4.27;ReadPosRankSum=-1.678;VQSLOD=-0.6860;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:48.18:0,48,376	0/0:13,0:13:20.96:0,21,176	0/0:30,0:25:58.21:0,58,820	0/0:36,0:28:64.41:0,64,944	0/1:27,1:28:55.73:116,0,56	0/0:27,0:26:20.86:0,21,321	0/0:28,0:28:49.25:0,49,509	0/1:34,0:34:40.56:321,0,41	0/1:22,0:22:16.48:16,0,129	0/1:25,1:26:88.49:129,0,88	0/1:23,2:25:36.62:112,0,37	0/0:30,0:27:50.79:0,51,452	0/0:15,0:15:20.93:0,21,177	0/0:10,0:10:15.03:0,15,168	0/0:12,0:12:17.99:0,18,186	0/1:25,0:25:51.96:90,0,52	0/0:21,0:21:24.83:0,25,354	0/1:30,0:30:22.79:152,0,23	0/1:18,0:18:28.57:150,0,29	0/1:20,0:20:47.39:49,0,47	0/1:29,0:29:79.57:130,0,80	0/0:25,0:25:33.31:0,33,280	0/0:15,0:15:20.76:0,21,138	0/0:22,0:22:33.49:0,33,325	0/0:8,0:8:2.02:0,2,50	1/1:25,0:24:9.90:122,10,0	0/1:13,1:14:13.94:32,0,14	0/0:9,0:9:15.02:0,15,154
chr10	93299232	.	A	AC	2559.88	PASS	AB=0.712;AC=13;AF=0.232;AN=56;BaseQRankSum=3.691;DP=633;FS=6.757;HRun=1;HaplotypeScore=195.1732;InbreedingCoeff=-0.1335;MQ=67.14;MQ0=1;MQRankSum=2.371;QD=8.59;ReadPosRankSum=7.101;VQSLOD=0.9874;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:52.05:0,52,501	0/0:13,0:13:0.68:0,1,240	0/0:32,0:27:69.98:0,70,884	0/0:37,0:29:78.11:0,78,989	0/1:14,14:28:53.20:286,0,53	0/0:28,0:27:8.19:0,8,323	0/0:28,0:28:53.42:0,53,729	0/1:27,7:34:99:171,0,180	0/1:13,9:22:74.29:176,0,74	0/1:17,10:27:58.06:251,0,58	0/1:12,13:25:34.70:209,0,35	0/0:30,0:27:38.46:0,38,525	0/0:15,0:15:25.72:0,26,235	0/0:10,0:10:14.90:0,15,160	0/0:12,0:12:17.92:0,18,190	0/1:12,12:24:26.53:256,0,27	0/0:21,0:21:38.13:0,38,451	0/1:16,15:31:59.11:328,0,59	0/1:14,4:18:68.38:95,0,68	0/1:10,10:20:24.54:207,0,25	0/1:20,9:29:72.94:164,0,73	0/0:25,0:25:39.45:0,39,400	0/0:15,0:15:17.84:0,18,131	0/0:23,0:23:42.04:0,42,376	0/0:8,0:8:8.94:0,9,100	0/1:12,14:25:32.16:354,0,32	1/1:4,10:14:27.16:221,27,0	0/0:9,0:9:17.75:0,18,176
chr10	93299233	.	A	ACAC	5615.01	PASS	AB=0.803;AC=27;AF=0.482;AN=56;BaseQRankSum=5.522;DP=677;FS=6.228;HRun=0;HaplotypeScore=208.6921;InbreedingCoeff=-0.7720;MQ=64.43;MQ0=2;MQRankSum=-0.505;QD=9.24;ReadPosRankSum=7.994;VQSLOD=2.6928;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:36.20:36,0,350	0/1:13,0:13:63.79:64,0,155	0/0:32,0:25:71.91:0,72,984	0/0:37,0:29:80.59:0,81,1050	0/1:14,0:28:73.50:459,0,74	0/1:23,0:28:99:239,0,112	0/1:27,0:29:62.43:62,0,459	0/1:27,0:34:99:384,0,152	0/1:14,0:23:76.41:329,0,76	0/1:17,0:27:86.03:432,0,86	0/1:12,0:25:59.72:346,0,60	0/1:30,0:27:67.31:67,0,384	0/1:15,0:15:42.90:43,0,118	0/1:3,7:19:39.61:40,0,103	0/1:5,13:27:13.56:14,0,123	0/1:12,0:24:57.82:423,0,58	0/1:21,0:21:65.25:65,0,332	0/1:15,0:30:87.91:471,0,88	0/1:14,0:18:98.08:185,0,98	0/1:10,0:20:48.61:306,0,49	0/1:20,1:29:19.95:438,0,20	0/1:26,0:26:99:113,0,211	0/1:15,0:15:14.08:14,0,67	0/1:24,0:24:98.55:113,0,99	0/1:2,11:19:6.16:6,0,70	0/1:14,0:27:26.46:586,0,26	1/1:5,1:15:13.62:313,14,0	0/1:8,0:10:67.93:68,0,88
chr10	93299257	.	CGCCA	C	1078.57	PASS	AB=0.893;AC=6;AF=0.107;AN=56;BaseQRankSum=7.749;DP=621;FS=3.949;HRun=0;HaplotypeScore=164.8212;InbreedingCoeff=-0.1164;MQ=55.57;MQ0=3;MQRankSum=-6.742;QD=8.99;ReadPosRankSum=-3.469;VQSLOD=1.8619;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:52.06:0,52,1409	0/0:9,0:9:18.06:0,18,512	0/0:38,0:25:69.70:0,70,1809	0/0:31,0:22:58.63:0,59,1511	0/0:31,0:31:93.32:0,93,2659	0/1:22,0:24:99:528,0,543	0/1:17,0:18:99:296,0,348	0/0:26,0:26:78.27:0,78,2100	0/0:21,0:21:59.26:0,59,1675	0/0:28,0:28:84.29:0,84,2360	0/0:20,0:20:53.66:0,54,1557	0/1:21,0:18:4.31:4,0,1068	0/0:16,0:16:13.19:0,13,837	0/0:16,0:16:18.06:0,18,455	0/0:21,0:21:18.06:0,18,466	0/0:22,0:22:63.22:0,63,1804	0/1:21,0:21:31.52:32,0,1066	0/0:25,0:25:75.26:0,75,2166	0/0:20,0:20:57.20:0,57,1551	0/0:21,0:21:63.22:0,63,1758	0/0:23,0:23:57.90:0,58,1670	0/0:28,0:28:49.29:0,49,1362	0/0:21,0:21:27.40:0,27,1134	0/1:20,0:20:46.17:46,0,628	0/0:19,0:18:18.06:0,18,494	0/0:24,0:24:72.25:0,72,2074	0/0:15,0:15:39.02:0,39,1198	0/1:3,11:14:99:293,0,168
chr10	93299261	.	A	AAAACAAACAAAC	2891.05	PASS	AB=0.961;AC=9;AF=0.161;AN=56;BaseQRankSum=2.938;DP=651;FS=27.841;HRun=0;HaplotypeScore=253.4243;InbreedingCoeff=0.5758;MQ=57.51;MQ0=3;MQRankSum=-9.497;QD=21.10;ReadPosRankSum=-2.687;VQSLOD=1.3726;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:35.44:0,35,1374	0/0:9,0:9:15.05:0,15,450	0/0:40,0:27:45.15:0,45,1291	0/0:32,0:22:29.55:0,30,822	0/0:33,0:33:90.31:0,90,3105	1/1:14,10:27:41.21:1588,41,0	1/1:12,5:19:11.97:489,12,0	0/0:28,0:28:54.01:0,54,1567	0/0:20,0:20:45.15:0,45,1519	0/0:30,0:30:72.18:0,72,2302	0/0:21,0:21:57.13:0,57,1679	0/0:25,0:22:42.10:0,42,992	0/0:17,0:17:27.09:0,27,885	0/1:17,0:17:42.09:42,0,429	0/1:23,0:23:35.51:36,0,507	0/0:23,0:23:51.13:0,51,1522	0/0:22,0:22:38.99:0,39,963	0/0:25,0:25:63.22:0,63,2127	0/0:18,0:18:39.13:0,39,1303	0/0:22,0:22:42.14:0,42,1317	0/0:21,0:21:39.13:0,39,1364	0/1:26,0:30:46.22:46,0,1200	0/0:19,0:21:20.42:0,20,1097	0/0:18,0:21:8.73:0,9,772	0/0:18,0:17:18.06:0,18,527	0/0:25,0:25:54.18:0,54,1819	0/0:15,0:15:42.14:0,42,1369	1/1:18,1:18:29.93:846,30,0
chr10	93300561	.	TAAAC	T	1004.96	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.970;DP=792;FS=5.736;HRun=0;HaplotypeScore=135.4369;InbreedingCoeff=0.9990;MQ=86.54;MQ0=0;MQRankSum=-1.500;QD=31.41;ReadPosRankSum=2.834;VQSLOD=3.5730;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,163,4264	0/0:10,0:10:30.10:0,30,796	0/0:35,0:35:99:0,102,2646	0/0:22,0:22:57.19:0,57,1463	0/0:30,0:30:87.30:0,87,2320	0/0:35,0:35:96.32:0,96,2474	0/0:32,0:32:93.32:0,93,2433	0/0:39,0:39:99:0,108,2696	0/0:29,0:29:81.28:0,81,2131	0/0:26,0:26:75.25:0,75,1901	0/0:19,0:19:45.15:0,45,1198	0/0:21,0:21:57.20:0,57,1509	0/0:35,0:35:99:0,99,2624	0/0:31,0:31:90.30:0,90,2328	0/0:30,0:30:90.31:0,90,2378	0/0:28,0:28:84.29:0,84,2241	1/1:4,28:32:59.92:1100,60,0	0/0:20,0:20:57.20:0,57,1476	0/0:18,0:18:45.63:0,46,1191	0/0:22,0:22:60.21:0,60,1600	0/0:47,0:47:99:0,138,3645	0/0:27,0:27:72.22:0,72,1854	0/0:23,0:23:66.23:0,66,1760	0/0:35,0:35:99:0,105,2728	0/0:27,0:27:78.27:0,78,2066	0/0:22,0:22:66.23:0,66,1733	0/0:29,0:29:81.28:0,81,2103	0/0:10,0:10:30.10:0,30,791
chr10	93301329	.	G	GGAA	10103.46	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.550;DP=619;FS=2.971;HRun=0;HaplotypeScore=106.1681;InbreedingCoeff=0.9998;MQ=72.89;MQ0=0;MQRankSum=-7.741;QD=66.04;ReadPosRankSum=0.961;VQSLOD=6.0837;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,2067	0/0:10,0:10:30.10:0,30,559	0/0:19,0:19:56.65:0,57,964	0/0:23,0:23:57.10:0,57,997	0/0:25,0:25:72.25:0,72,1335	0/0:23,0:23:69.24:0,69,1277	0/0:26,0:26:78.22:0,78,1359	0/0:37,0:37:99:0,108,1922	0/0:19,0:19:57.20:0,57,1062	0/0:25,0:25:75.26:0,75,1371	0/0:18,0:18:54.17:0,54,973	1/1:4,13:18:54.19:1288,54,0	1/1:2,14:16:48.15:1134,48,0	1/1:5,16:22:63.20:1456,63,0	0/0:25,0:25:75.23:0,75,1337	0/0:18,0:18:54.17:0,54,976	0/0:1,0:27:75.57:0,76,460	0/0:12,0:12:36.08:0,36,634	0/0:20,0:20:57.18:0,57,1020	0/0:12,0:12:36.11:0,36,639	0/0:21,0:21:63.20:0,63,1142	1/1:4,14:18:51.18:1209,51,0	1/1:7,20:27:77.30:1627,77,0	1/1:2,23:25:63.22:1551,63,0	1/1:5,22:27:78.27:1838,78,0	0/0:23,0:23:63.18:0,63,1174	0/0:31,0:30:93.32:0,93,1716	0/0:14,0:14:39.11:0,39,694
chr10	93301372	.	GT	G	2911.08	PASS	AB=0.963;AC=15;AF=0.268;AN=56;BaseQRankSum=11.365;DP=551;FS=12.323;HRun=6;HaplotypeScore=76.6712;InbreedingCoeff=0.9069;MQ=85.32;MQ0=0;MQRankSum=-4.839;QD=19.28;ReadPosRankSum=2.347;VQSLOD=2.2954;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.25:0,96,1202	0/0:8,0:8:24.08:0,24,312	0/0:22,0:22:33.73:0,34,507	0/1:25,1:26:43.04:43,0,437	0/0:21,0:21:57.19:0,57,748	0/0:20,0:20:54.18:0,54,710	0/0:21,0:21:63.11:0,63,789	0/0:19,0:19:48.10:0,48,554	0/0:24,0:24:69.21:0,69,892	0/0:22,0:22:63.19:0,63,792	0/0:17,0:17:48.15:0,48,616	1/1:4,13:17:48.06:488,48,0	1/1:1,10:11:30.07:321,30,0	1/1:2,14:16:38.85:386,39,0	0/0:24,0:24:69.20:0,69,879	0/0:22,0:22:63.20:0,63,816	0/0:28,0:28:75.21:0,75,943	0/0:18,0:18:48.10:0,48,573	0/0:14,0:14:39.09:0,39,484	0/0:16,0:16:45.15:0,45,592	0/0:15,0:15:42.12:0,42,537	1/1:3,9:12:27.07:290,27,0	1/1:5,19:24:51.12:548,51,0	1/1:5,15:20:39.54:405,40,0	1/1:1,24:25:60.10:631,60,0	0/0:19,0:19:54.14:0,54,664	0/0:30,0:29:90.17:0,90,1074	0/0:6,0:6:18.04:0,18,221
chr10	93301378	.	TC	T	559.94	PASS	AB=0.938;AC=14;AF=0.250;AN=56;BaseQRankSum=13.428;DP=553;FS=6.000;HRun=5;HaplotypeScore=81.7165;InbreedingCoeff=0.6921;MQ=89.12;MQ0=0;MQRankSum=-3.722;QD=3.81;ReadPosRankSum=2.878;VQSLOD=-0.5228;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.26:0,96,1233	0/0:8,0:8:24.08:0,24,324	0/1:24,4:28:14.16:14,0,564	0/0:26,0:26:24.62:0,25,491	0/0:19,0:19:57.19:0,57,768	0/0:21,0:21:60.17:0,60,780	0/0:21,0:21:57.19:0,57,770	0/0:17,0:17:33.10:0,33,433	0/0:23,0:23:66.21:0,66,877	0/0:22,0:22:60.15:0,60,772	0/0:17,0:17:51.15:0,51,655	1/1:17,0:17:19.54:157,20,0	1/1:11,0:11:1.02:87,1,0	1/1:17,0:17:13.95:104,14,0	0/0:25,0:25:72.21:0,72,942	0/0:21,0:21:60.19:0,60,796	0/0:27,0:27:69.22:0,69,918	0/0:18,0:18:42.07:0,42,530	0/0:15,0:15:39.11:0,39,500	0/0:18,0:18:51.15:0,51,659	0/0:16,0:16:45.11:0,45,563	0/1:11,0:11:24.72:40,0,25	1/1:20,0:20:3.25:112,3,0	1/1:18,0:18:4.51:81,5,0	1/1:25,0:25:20.91:135,21,0	0/0:18,0:18:48.15:0,48,629	0/0:31,0:30:72.22:0,72,955	0/0:7,0:7:21.03:0,21,237
chr10	93302602	.	AG	A	7773.67	PASS	AB=0.909;AC=25;AF=0.446;AN=56;BaseQRankSum=6.101;DP=654;FS=4.423;HRun=7;HaplotypeScore=72.9381;InbreedingCoeff=0.9494;MQ=79.89;MQ0=0;MQRankSum=-1.382;QD=26.26;ReadPosRankSum=2.089;VQSLOD=5.7454;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,123,1517	0/0:11,0:11:30.08:0,30,364	0/0:20,0:20:46.63:0,47,609	0/0:16,0:16:37.03:0,37,515	1/1:3,16:19:45.10:459,45,0	0/0:23,0:22:63.20:0,63,792	0/0:28,0:28:75.24:0,75,943	1/1:3,28:31:78.16:789,78,0	1/1:2,20:22:60.13:612,60,0	1/1:2,23:25:69.08:677,69,0	1/1:0,13:13:36.08:367,36,0	0/0:30,0:30:87.28:0,87,1092	0/0:17,0:17:42.12:0,42,515	0/0:22,0:22:66.19:0,66,806	0/0:31,0:31:84.26:0,84,1043	1/1:0,27:27:72.16:735,72,0	0/0:26,0:26:72.23:0,72,906	1/1:1,13:14:39.09:398,39,0	1/1:3,17:20:51.11:520,51,0	1/1:3,13:16:39.09:398,39,0	1/1:1,54:55:99:1591,156,0	0/0:22,0:22:63.20:0,63,783	0/1:9,1:10:3.54:4,0,262	0/0:27,0:27:66.16:0,66,799	0/0:27,0:27:78.25:0,78,981	1/1:0,23:24:72.16:734,72,0	1/1:1,19:20:48.07:490,48,0	0/0:12,0:12:24.06:0,24,287
chr10	93303376	.	T	TGA	3627.83	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.451;DP=763;FS=0.960;HRun=0;HaplotypeScore=88.1684;InbreedingCoeff=0.9983;MQ=64.04;MQ0=13;MQRankSum=1.192;QD=36.64;ReadPosRankSum=-1.344;VQSLOD=5.2517;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1339	0/0:11,0:11:21.06:0,21,268	0/0:29,0:19:57.12:0,57,725	0/0:33,0:25:48.99:0,49,665	0/0:19,0:19:54.18:0,54,730	1/1:1,13:16:30.10:526,30,0	1/1:5,34:38:81.28:1419,81,0	0/0:24,0:22:51.17:0,51,690	0/0:25,0:25:72.22:0,72,956	0/0:32,0:30:87.28:0,87,1163	0/0:18,0:16:42.10:0,42,535	0/0:33,0:33:93.29:0,93,1242	0/0:34,0:34:99:0,99,1287	0/0:22,0:22:63.21:0,63,852	0/0:41,0:41:99:0,111,1501	0/0:21,0:21:60.20:0,60,810	1/1:6,37:42:96.33:1682,96,0	0/0:29,0:29:72.24:0,72,972	0/0:28,0:28:75.23:0,75,986	0/0:17,0:17:45.12:0,45,589	0/0:57,0:57:99:0,159,2091	0/0:19,0:19:48.15:0,48,634	0/0:22,0:22:60.19:0,60,796	0/0:39,0:39:99:0,105,1420	0/0:15,0:15:42.10:0,42,535	0/0:25,0:25:69.22:0,69,917	0/0:20,0:20:57.15:0,57,738	0/0:16,0:16:42.14:0,42,568
chr10	93305029	.	TC	T	203.62	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.847;DP=712;FS=6.437;HRun=1;HaplotypeScore=86.6266;InbreedingCoeff=0.9998;MQ=80.12;MQ0=0;MQRankSum=-5.430;QD=15.66;ReadPosRankSum=1.029;VQSLOD=3.4565;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.25:0,84,1294	0/0:19,0:19:57.19:0,57,911	0/0:30,0:30:87.27:0,87,1340	0/0:28,0:27:64.35:0,64,982	0/0:28,0:28:84.27:0,84,1317	0/0:22,0:22:66.23:0,66,1055	0/0:29,0:29:87.30:0,87,1388	0/0:27,0:27:81.25:0,81,1232	0/0:22,0:22:63.21:0,63,1003	0/0:19,0:19:57.19:0,57,910	0/0:22,0:22:60.14:0,60,955	0/0:30,0:30:90.29:0,90,1413	0/0:26,0:26:78.21:0,78,1189	0/0:19,0:19:57.19:0,57,911	0/0:36,0:36:99:0,108,1696	0/0:27,0:27:81.26:0,81,1264	1/1:0,13:13:35.79:298,36,0	0/0:13,0:13:39.13:0,39,624	0/0:26,0:26:78.27:0,78,1245	0/0:25,0:25:72.25:0,72,1151	0/0:27,0:27:77.99:0,78,1222	0/0:28,0:28:81.28:0,81,1283	0/0:20,0:20:60.20:0,60,959	0/0:37,0:37:99:0,108,1726	0/0:32,0:32:90.30:0,90,1408	0/0:34,0:34:99:0,102,1609	0/0:30,0:28:90.31:0,90,1439	0/0:15,0:15:45.15:0,45,719
chr10	93305031	.	TCAGAAACA	T	702.53	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.062;DP=706;FS=4.101;HRun=0;HaplotypeScore=188.5511;InbreedingCoeff=0.9999;MQ=79.68;MQ0=0;MQRankSum=-6.006;QD=54.04;ReadPosRankSum=0.362;VQSLOD=2.9997;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.27:0,78,3517	0/0:19,0:19:57.18:0,57,2517	0/0:29,0:29:83.92:0,84,3032	0/0:28,0:27:72.21:0,72,2798	0/0:28,0:28:84.27:0,84,3522	0/0:22,0:22:66.21:0,66,2754	0/0:28,0:28:84.23:0,84,3476	0/0:29,0:29:87.29:0,87,3642	0/0:19,0:19:57.20:0,57,2505	0/0:20,0:20:57.17:0,57,2408	0/0:21,0:21:60.21:0,60,2740	0/0:29,0:29:87.28:0,87,3533	0/0:24,0:24:69.22:0,69,2725	0/0:19,0:19:57.20:0,57,2570	0/0:34,0:34:99:0,102,4009	0/0:26,0:26:78.25:0,78,3463	1/1:1,12:13:39.07:797,39,0	0/0:14,0:14:42.13:0,42,1810	0/0:29,0:29:87.28:0,87,3345	0/0:27,0:27:78.24:0,78,3355	0/0:26,0:26:75.19:0,75,2821	0/0:28,0:28:81.25:0,81,3371	0/0:20,0:20:60.19:0,60,2488	0/0:37,0:37:99:0,108,4354	0/0:29,0:29:84.24:0,84,3409	0/0:33,0:33:99:0,99,4262	0/0:31,0:29:93.25:0,93,3765	0/0:18,0:18:54.17:0,54,2323
chr10	93305216	.	A	AAGG	5985.69	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-11.054;DP=716;FS=6.537;HRun=0;HaplotypeScore=97.1392;InbreedingCoeff=0.9946;MQ=58.15;MQ0=11;MQRankSum=-1.299;QD=38.62;ReadPosRankSum=2.230;VQSLOD=5.8099;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,113,1639	0/0:13,0:13:27.09:0,27,395	0/0:39,0:14:15:0,15,207	0/0:32,0:13:21.12:0,21,307	0/0:22,0:22:54.18:0,54,795	0/0:29,0:29:75.25:0,75,1103	0/0:34,0:34:78.14:0,78,1080	0/0:30,0:30:75.24:0,75,1084	0/0:24,0:24:66.22:0,66,972	0/0:27,0:27:75.25:0,75,1105	0/0:20,0:20:48.15:0,48,686	1/1:1,16:18:36.12:746,36,0	1/1:5,16:21:39.13:800,39,0	1/1:2,15:19:27.09:553,27,0	0/0:26,0:26:72.22:0,72,1023	0/0:24,0:24:57.18:0,57,803	0/0:35,0:35:72.20:0,72,1014	0/0:23,0:23:58.35:0,58,793	0/0:29,0:27:57.19:0,57,839	0/0:25,0:25:63.20:0,63,893	0/0:32,0:32:81.23:0,81,1129	1/1:1,19:20:45.15:919,45,0	1/1:7,14:20:42.14:809,42,0	1/1:5,19:24:19.48:997,19,0	1/1:5,13:18:21.07:431,21,0	0/0:29,0:29:78.26:0,78,1147	0/0:26,0:25:69.23:0,69,1016	1/1:3,11:13:36.12:730,36,0
chr10	93305657	.	GCA	G	2141.54	PASS	AB=0.870;AC=24;AF=0.480;AN=50;BaseQRankSum=-1.900;DP=599;FS=6.037;HRun=0;HaplotypeScore=107.1228;InbreedingCoeff=0.6777;MQ=64.45;MQ0=4;MQRankSum=1.562;QD=7.84;ReadPosRankSum=1.177;VQSLOD=2.7135;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:41:19.24:0,19,346	0/0:6,0:8:11.92:0,12,93	0/1:29,0:18:0:0,0,0	0/0:25,0:16:2.96:0,3,45	1/1:8,7:16:12.03:133,12,0	0/0:7,0:11:3:0,3,26	0/0:22,0:32:9.01:0,9,96	1/1:17,4:20:6.01:66,6,0	1/1:9,13:22:35.93:379,36,0	1/1:18,3:21:9.02:100,9,0	1/1:7,5:12:10.27:102,10,0	0/0:23,0:22:11.96:0,12,97	./.	0/0:22,0:22:9:0,9,95	0/0:10,0:17:3.01:0,3,44	1/1:9,12:24:38.56:361,39,0	0/0:25,0:25:15.90:0,16,124	1/1:9,10:23:38.44:354,38,0	1/1:13,2:15:12.17:95,12,0	1/1:10,6:15:18.05:199,18,0	1/1:20,4:34:29.49:239,29,0	0/0:25,0:24:2.60:0,3,40	./.	0/0:33,0:38:2.99:0,3,24	./.	0/1:13,7:20:27.17:148,0,27	1/1:10,6:17:14.87:147,15,0	0/0:10,0:10:11.91:0,12,100
chr10	93305812	.	T	TG	11344.54	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-12.606;DP=648;FS=4.458;HRun=4;HaplotypeScore=64.0423;InbreedingCoeff=0.9877;MQ=86.42;MQ0=0;MQRankSum=-5.401;QD=36.95;ReadPosRankSum=5.096;VQSLOD=4.8795;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,42:44:99:1559,114,0	1/1:0,3:3:9.03:123,9,0	0/0:26,0:26:69.17:0,69,761	0/0:29,0:29:67:0,67,711	0/0:18,0:18:51.14:0,51,575	1/1:1,14:15:39.13:533,39,0	1/1:0,37:37:99:1395,102,0	0/0:26,0:26:60.17:0,60,679	0/0:21,0:21:60.17:0,60,680	0/0:18,0:18:54.11:0,54,599	0/0:18,0:18:54.14:0,54,602	1/1:2,20:22:63.20:846,63,0	1/1:0,13:13:36.12:488,36,0	1/1:1,26:27:75.24:1014,75,0	1/1:0,17:17:51.17:698,51,0	0/0:17,0:17:48.14:0,48,544	1/1:2,41:43:99:1704,126,0	0/0:27,0:27:69.20:0,69,783	0/0:19,0:19:54.14:0,54,603	0/0:17,0:17:39.11:0,39,442	0/0:61,0:61:99:0,143,1814	1/1:2,13:15:30.10:402,30,0	1/1:0,16:16:45.15:615,45,0	1/1:2,25:27:69.23:944,69,0	1/1:1,22:23:63.21:862,63,0	0/0:28,0:28:69.19:0,69,782	0/0:16,0:16:45.13:0,45,511	1/1:1,4:5:12.04:164,12,0
chr10	93306257	.	A	ATTTCC	11734.94	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=16.061;DP=506;FS=2.041;HRun=0;HaplotypeScore=131.2110;InbreedingCoeff=0.9942;MQ=76.45;MQ0=0;MQRankSum=-15.426;QD=69.44;ReadPosRankSum=1.965;VQSLOD=6.0480;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:54.19:1370,54,0	1/1:2,4:6:15.04:345,15,0	0/0:14,0:15:26.67:0,27,674	0/0:14,0:14:36.05:0,36,679	0/0:33,0:33:99:0,99,2283	1/1:1,20:21:63.22:1649,63,0	1/1:6,11:17:42.10:996,42,0	0/0:20,0:20:57.18:0,57,1230	0/0:23,0:23:69.24:0,69,1607	0/0:20,0:20:60.21:0,60,1398	0/0:20,0:20:60.20:0,60,1338	1/1:0,10:10:30.10:791,30,0	1/1:2,7:9:27.09:671,27,0	1/1:5,6:11:21.05:502,21,0	1/1:1,14:15:45.15:1152,45,0	0/0:19,0:19:57.18:0,57,1266	1/1:1,11:12:33.58:849,34,0	0/0:31,0:31:93.26:0,93,2067	0/0:32,0:32:90.25:0,90,1863	0/0:27,0:27:81.25:0,81,1738	0/0:14,0:14:42.11:0,42,844	1/1:1,10:13:36.07:826,36,0	1/1:1,12:13:39.13:1031,39,0	1/1:1,8:9:23.07:492,23,0	1/1:1,9:10:30.07:722,30,0	0/0:25,0:25:75.25:0,75,1685	0/0:44,0:44:99:0,132,2944	1/1:1,4:5:15.03:339,15,0
chr10	93306258	.	A	ACTCG	13080.21	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=18.270;DP=557;FS=1.859;HRun=0;HaplotypeScore=154.1571;InbreedingCoeff=0.9969;MQ=73.93;MQ0=0;MQRankSum=-18.332;QD=57.88;ReadPosRankSum=1.312;VQSLOD=6.2166;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,17:30:75.17:1621,75,0	1/1:1,4:5:15.02:288,15,0	0/0:15,0:15:42.03:0,42,715	0/0:15,0:15:39.07:0,39,651	0/0:33,0:33:99:0,99,2076	1/1:7,20:27:78.18:1721,78,0	1/1:13,11:24:49.90:1108,50,0	0/0:19,0:19:57.20:0,57,1195	0/0:23,0:23:69.24:0,69,1441	0/0:20,0:20:60.21:0,60,1259	0/0:19,0:19:57.18:0,57,1158	1/1:3,10:13:39.13:870,39,0	1/1:6,7:14:38.26:880,38,0	1/1:5,6:11:24.08:553,24,0	1/1:7,14:21:59.46:1368,59,0	0/0:18,0:18:54.17:0,54,1094	1/1:5,11:16:48.16:1019,48,0	0/0:30,0:30:90.31:0,90,1846	0/0:32,0:32:96.30:0,96,1839	0/0:26,0:26:78.27:0,78,1625	0/0:12,0:12:36.12:0,36,755	1/1:7,10:17:42.14:927,42,0	1/1:4,12:16:45.13:933,45,0	1/1:5,8:13:32.83:650,33,0	1/1:3,9:12:33.11:708,33,0	0/0:25,0:25:75.25:0,75,1537	0/0:44,0:44:99:0,132,2703	1/1:3,4:7:21.07:434,21,0
chr10	93306391	.	C	CT	9142.54	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=5.805;DP=590;FS=11.682;HRun=0;HaplotypeScore=68.9057;InbreedingCoeff=0.9976;MQ=75.59;MQ0=0;MQRankSum=-2.735;QD=44.38;ReadPosRankSum=2.541;VQSLOD=4.5443;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:87.29:0,87,1216	0/0:5,0:5:15.05:0,15,210	0/0:16,0:17:48.05:0,48,618	0/0:18,0:17:48.05:0,48,623	0/0:23,0:23:69.23:0,69,964	1/1:0,21:21:63.21:1006,63,0	1/1:0,22:22:60.20:958,60,0	0/0:27,0:27:81.27:0,81,1133	0/0:24,0:24:72.24:0,72,1006	0/0:17,0:17:48.16:0,48,670	0/0:21,0:21:63.21:0,63,877	1/1:0,14:14:42.14:671,42,0	1/1:0,17:17:51.17:814,51,0	1/1:0,10:10:27.09:431,27,0	0/0:25,0:25:75.25:0,75,1048	0/0:21,0:21:63.21:0,63,881	1/1:1,26:27:78.27:1245,78,0	0/0:22,0:22:63.21:0,63,881	0/0:21,0:21:63.21:0,63,881	0/0:23,0:23:69.23:0,69,964	0/0:26,0:26:78.26:0,78,1091	1/1:0,17:17:51.17:815,51,0	1/1:0,14:14:39.13:624,39,0	1/1:0,28:27:66.23:1055,66,0	1/1:2,18:20:41.14:756,41,0	0/0:26,0:26:75.24:0,75,1034	0/0:32,0:32:93.29:0,93,1282	1/1:0,16:16:48.16:767,48,0
chr10	93306474	.	C	CA	709.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.299;DP=581;FS=5.203;HRun=7;HaplotypeScore=78.0898;InbreedingCoeff=0.8885;MQ=70.79;MQ0=0;MQRankSum=-0.508;QD=25.35;ReadPosRankSum=0.689;VQSLOD=4.3342;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:48.06:0,48,463	0/0:7,0:7:18.03:0,18,174	0/0:12,0:12:7.21:0,7,185	0/0:13,0:11:11.89:0,12,143	0/0:44,0:44:99:0,117,1123	0/0:24,0:24:66.10:0,66,637	0/0:11,0:11:30.05:0,30,289	0/0:34,0:34:66.04:0,66,637	0/0:24,0:24:63.07:0,63,602	0/0:17,0:17:45.05:0,45,428	0/0:21,0:21:60.09:0,60,579	0/0:20,0:20:57.06:0,57,538	0/0:15,0:15:42.07:0,42,405	0/0:15,0:15:39.06:0,39,376	0/0:19,0:19:48.08:0,48,463	0/0:24,0:24:66.10:0,66,637	1/1:4,24:28:43.24:805,43,0	0/0:13,0:13:27.04:0,27,260	0/0:20,0:20:51.07:0,51,488	0/0:23,0:23:63.08:0,63,603	0/0:15,0:15:39.06:0,39,376	0/0:13,0:13:39.06:0,39,376	0/0:24,0:24:66.11:0,66,637	0/0:21,0:21:54.08:0,54,521	0/0:23,0:23:51.08:0,51,492	0/0:28,0:28:78.12:0,78,753	0/0:35,0:35:87.11:0,87,833	0/0:14,0:14:42.07:0,42,406
chr10	93308444	.	A	AGG	5120.71	PASS	AB=0.947;AC=21;AF=0.375;AN=56;BaseQRankSum=-4.459;DP=604;FS=6.317;HRun=8;HaplotypeScore=88.4554;InbreedingCoeff=0.9229;MQ=73.07;MQ0=2;MQRankSum=-3.437;QD=24.62;ReadPosRankSum=0.527;VQSLOD=4.1915;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.13:0,60,657	0/0:5,0:5:15.04:0,15,167	0/0:20,1:21:34.05:0,34,337	0/1:17,1:17:15.18:15,0,283	0/0:30,0:30:78.18:0,78,869	1/1:2,0:15:35.18:123,35,0	1/1:4,0:18:41.77:144,42,0	0/0:27,0:27:69.16:0,69,760	0/0:26,0:26:72.17:0,72,802	0/0:29,0:29:81.22:0,81,902	0/0:16,0:16:39.09:0,39,426	1/1:3,13:16:24.08:381,24,0	1/1:4,17:21:48.16:760,48,0	1/1:2,21:24:57.19:904,57,0	0/0:13,0:13:33.07:0,33,358	0/0:17,0:17:42.08:0,42,459	0/0:11,0:35:80.42:0,80,360	0/0:28,0:27:63.09:0,63,688	0/0:21,0:21:54.09:0,54,574	0/0:18,0:18:45.11:0,45,491	0/0:39,0:39:99:0,102,1114	1/1:6,17:23:39.13:610,39,0	1/1:2,15:17:41.89:666,42,0	1/1:1,21:21:51.17:801,51,0	1/1:2,16:18:42.10:638,42,0	0/0:26,0:26:66.15:0,66,735	0/0:20,0:20:51.12:0,51,567	1/1:0,0:14:22.46:77,22,0
chr10	93308495	.	C	CTT	6154.68	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-4.206;DP=622;FS=13.698;HRun=1;HaplotypeScore=87.6818;InbreedingCoeff=0.9982;MQ=91.04;MQ0=1;MQRankSum=-4.999;QD=51.72;ReadPosRankSum=2.951;VQSLOD=3.6160;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:75.26:1449,75,0	1/1:0,7:9:20.91:405,21,0	0/0:23,0:24:66.15:0,66,868	0/0:26,0:26:65.51:0,66,1007	0/0:24,0:24:72.23:0,72,1077	1/1:0,12:13:22.03:623,22,0	1/1:1,24:25:69.24:1333,69,0	0/0:24,0:24:69.19:0,69,968	0/0:22,0:22:66.22:0,66,1010	0/0:37,0:37:99:0,102,1524	0/0:16,0:16:48.16:0,48,734	0/0:23,0:23:57.19:0,57,872	0/0:23,0:23:69.22:0,69,1022	0/0:27,0:26:66.02:0,66,949	1/1:0,18:18:54.19:1044,54,0	0/0:16,0:16:48.16:0,48,732	1/1:2,26:27:72.16:1301,72,0	0/0:19,0:19:54.18:0,54,814	0/0:23,0:23:69.22:0,69,1024	0/0:13,0:13:33.08:0,33,460	0/0:40,0:40:99:0,105,1577	0/0:18,0:18:51.14:0,51,725	0/0:10,0:10:26.93:0,27,405	0/0:19,0:18:45.15:0,45,689	0/0:19,0:19:54.17:0,54,805	0/0:32,0:32:93.32:0,93,1423	0/0:32,0:32:93.29:0,93,1399	0/0:16,0:16:33.09:0,33,482
chr10	93309062	.	CTTTATTTATTTA	C	1732.16	PASS	AB=0.687;AC=29;AF=0.725;AN=40;BaseQRankSum=1.128;DP=312;FS=0.000;HRun=0;HaplotypeScore=121.0498;InbreedingCoeff=0.3085;MQ=72.13;MQ0=2;MQRankSum=-3.420;QD=8.06;ReadPosRankSum=-2.024;VQSLOD=2.0466;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:16:12.03:276,12,0	./.	./.	0/0:4,0:4:3.01:0,3,47	./.	0/1:10,0:22:17.25:17,0,34	./.	1/1:22,9:31:27.06:365,27,0	1/1:5,1:6:3.01:103,3,0	1/1:13,0:13:3:27,3,0	1/1:2,2:4:3.01:89,3,0	1/1:7,1:8:3.01:103,3,0	0/0:5,0:5:2.92:0,3,17	0/0:6,0:6:3.01:0,3,50	./.	1/1:5,3:8:3.01:103,3,0	0/0:14,0:39:55:0,55,1454	1/1:9,7:16:6.02:206,6,0	1/1:14,2:16:6.02:143,6,0	1/1:13,1:14:3.01:103,3,0	./.	./.	1/1:8,0:9:1.55:4,2,0	./.	0/1:11,0:15:3.52:4,0,18	1/1:7,4:11:12.02:213,12,0	1/1:10,1:11:3.01:103,3,0	0/1:6,0:15:0.35:0,0,31
chr10	93309439	.	ACTCTCTCTCT	A	2763.08	PASS	AB=0.708;AC=16;AF=0.286;AN=56;BaseQRankSum=8.336;DP=698;FS=13.878;HRun=0;HaplotypeScore=214.3954;InbreedingCoeff=0.0935;MQ=60.59;MQ0=13;MQRankSum=-6.199;QD=9.21;ReadPosRankSum=3.015;VQSLOD=1.5432;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,7:38:48.40:184,0,48	1/1:1,5:6:3.48:85,3,0	0/1:34,1:21:39.44:39,0,2245	0/0:28,0:15:42.14:0,42,1717	0/0:18,0:17:42.14:0,42,1760	0/0:6,0:24:17.47:0,17,105	0/1:11,0:33:82.68:143,0,83	0/0:33,0:32:84.29:0,84,3292	0/0:28,0:28:80.30:0,80,3553	0/0:27,0:27:77.83:0,78,2954	0/0:16,0:16:48.16:0,48,1953	0/1:9,11:24:7.77:174,0,8	0/1:8,15:26:21.89:390,0,22	0/1:9,10:22:37.36:260,0,37	0/1:18,7:25:65.79:137,0,66	0/0:28,0:28:75.25:0,75,3409	1/1:12,8:22:12.93:639,13,0	0/0:29,0:29:81.26:0,81,3366	0/0:20,0:19:57.20:0,57,2445	0/0:18,0:18:48.64:0,49,2130	0/0:61,0:61:99:0,132,5945	0/0:10,10:23:2.61:0,3,19	0/1:4,6:13:8.18:94,0,8	0/1:24,7:32:25.07:303,0,25	0/1:7,1:13:48.26:96,0,48	0/0:26,0:26:72.25:0,72,3221	0/0:19,0:19:54.17:0,54,2344	1/1:5,0:8:15.52:388,16,0
chr10	93311281	.	GC	G	1389.92	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.435;DP=461;FS=0.000;HRun=5;HaplotypeScore=45.5573;InbreedingCoeff=0.8577;MQ=63.72;MQ0=0;MQRankSum=-0.173;QD=27.25;ReadPosRankSum=-0.237;VQSLOD=2.8926;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:34:93.26:1054,93,0	1/1:0,9:9:18.05:204,18,0	0/0:3,0:3:1.78:0,2,57	0/0:1,0:1:2.88:0,3,15	0/0:13,0:13:39.12:0,39,516	0/0:12,0:12:36.11:0,36,475	0/0:30,0:30:78.24:0,78,1035	0/0:14,0:14:39.13:0,39,533	0/0:6,0:6:18.06:0,18,246	0/0:15,0:15:45.14:0,45,593	0/0:8,0:8:24.08:0,24,327	0/0:21,0:21:57.18:0,57,763	0/0:6,0:6:18.06:0,18,246	0/0:18,0:18:51.16:0,51,680	1/1:0,8:8:24.07:272,24,0	0/0:8,0:8:21.07:0,21,287	0/0:29,0:29:87.28:0,87,1170	0/0:31,0:31:93.28:0,93,1239	0/0:19,0:19:57.19:0,57,780	0/0:9,0:9:27.08:0,27,353	0/0:54,0:54:99:0,147,1993	0/0:12,0:12:33.11:0,33,449	0/0:4,0:4:12.04:0,12,163	0/0:38,0:38:99:0,108,1476	0/0:13,0:13:36.08:0,36,471	0/0:19,0:19:51.15:0,51,668	0/0:12,0:12:33.11:0,33,450	0/0:15,0:14:45.13:0,45,595
chr10	93311452	.	TTGAA	T	8511.39	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=15.181;DP=596;FS=3.213;HRun=0;HaplotypeScore=99.5624;InbreedingCoeff=0.9832;MQ=73.21;MQ0=1;MQRankSum=-1.972;QD=29.86;ReadPosRankSum=2.973;VQSLOD=4.6374;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,26:37:54.10:866,54,0	1/1:3,3:6:8.99:120,9,0	0/0:16,0:14:10.28:0,10,178	0/0:15,0:15:18.05:0,18,385	0/0:26,0:26:54.17:0,54,1278	1/1:3,12:15:30.10:499,30,0	1/1:7,23:30:42.14:692,42,0	0/0:27,0:27:57.19:0,57,1318	0/0:18,0:18:45.15:0,45,1058	0/0:22,0:22:60.20:0,60,1417	0/0:19,0:19:51.15:0,51,1201	1/1:2,19:21:48.16:799,48,0	1/1:4,16:20:42.06:664,42,0	1/1:3,17:20:42.14:696,42,0	1/1:1,11:12:24.08:400,24,0	0/0:14,0:14:24.08:0,24,562	1/1:4,29:33:57.19:949,57,0	0/0:36,0:36:75.18:0,75,1651	0/0:25,0:25:36.12:0,36,797	0/0:19,0:19:45.14:0,45,1060	0/0:27,0:27:69.24:0,69,1693	1/1:5,10:15:24.08:398,24,0	1/1:1,9:10:21.07:346,21,0	1/1:5,17:22:36.04:566,36,0	1/1:5,19:24:51.17:849,51,0	0/0:24,0:24:54.17:0,54,1283	0/0:23,0:23:48.11:0,48,979	1/1:4,16:20:42.08:667,42,0
chr10	93313151	.	G	GGCCGACA	19092.01	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=0.296;DP=549;FS=1.549;HRun=0;HaplotypeScore=153.2133;InbreedingCoeff=0.9768;MQ=74.39;MQ0=0;MQRankSum=-17.400;QD=85.61;ReadPosRankSum=1.170;VQSLOD=5.2227;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,20:33:72.25:2736,72,0	1/1:1,6:9:18.06:712,18,0	0/0:14,0:14:39.13:0,39,930	0/0:13,0:13:30.10:0,30,729	0/0:14,0:14:42.14:0,42,1090	1/1:3,8:11:27.09:977,27,0	1/1:10,20:33:75.26:2872,75,0	0/0:31,0:31:90.29:0,90,2146	0/0:27,0:27:78.27:0,78,1921	0/0:14,0:14:30.10:0,30,779	0/0:8,0:8:24.07:0,24,532	1/1:7,19:26:69.24:2664,69,0	1/1:1,8:9:27.09:1074,27,0	1/1:11,11:23:60.17:2146,60,0	1/1:2,11:13:39.13:1504,39,0	0/0:16,0:16:48.15:0,48,1162	0/0:25,0:25:75.22:0,75,1706	0/0:24,0:24:63.20:0,63,1496	0/0:10,0:10:27.09:0,27,700	0/0:9,0:9:17.61:0,18,466	0/0:87,0:87:99:0,253,6498	1/1:9,7:16:17.09:595,17,0	1/1:2,2:4:6.02:238,6,0	1/1:8,17:25:36.12:1363,36,0	1/1:4,12:16:45.15:1733,45,0	0/0:19,0:19:57.19:0,57,1396	0/0:15,0:15:39.13:0,39,973	1/1:1,4:5:12.04:478,12,0
chr10	93313201	.	CACTGGGT	C	4275.18	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.684;DP=478;FS=7.803;HRun=0;HaplotypeScore=170.8987;InbreedingCoeff=0.9234;MQ=65.54;MQ0=0;MQRankSum=-11.543;QD=37.18;ReadPosRankSum=3.987;VQSLOD=3.5394;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:78.72:0,79,2405	0/0:6,0:6:12.03:0,12,450	0/0:5,0:5:15.05:0,15,573	0/0:8,0:8:18.06:0,18,689	0/0:11,0:11:33.11:0,33,1184	0/0:5,0:5:15.01:0,15,421	0/0:39,0:39:99:0,102,3939	0/0:16,0:16:48.16:0,48,1869	0/0:21,0:21:63.22:0,63,2470	0/0:11,0:11:30.10:0,30,1053	0/0:7,0:7:21.07:0,21,819	1/1:1,21:22:44.18:1079,44,0	1/1:4,12:17:36.09:843,36,0	1/1:4,19:23:47.19:1150,47,0	0/0:16,0:16:42.14:0,42,1691	0/0:14,0:14:42.14:0,42,1661	0/0:27,0:27:78.27:0,78,3077	0/0:22,0:22:66.23:0,66,2551	0/0:12,0:12:33.11:0,33,1223	0/0:8,0:8:21.07:0,21,765	0/0:69,0:69:99:0,193,7173	1/1:2,9:11:15.05:378,15,0	1/1:0,7:7:5.99:147,6,0	1/1:7,17:24:18.05:375,18,0	1/1:2,8:10:8.53:225,9,0	0/0:19,0:19:51.17:0,51,1836	0/0:16,0:16:48.16:0,48,1789	1/1:0,1:1:3.01:78,3,0
chr10	93313492	.	AC	A	4068.02	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=9.495;DP=564;FS=13.567;HRun=8;HaplotypeScore=79.5580;InbreedingCoeff=0.9978;MQ=83.90;MQ0=0;MQRankSum=-3.243;QD=16.95;ReadPosRankSum=3.931;VQSLOD=2.4626;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,1:52:99:420,99,0	1/1:0,0:13:17.90:59,18,0	0/0:22,0:22:51.52:0,52,547	0/0:19,0:19:27.23:0,27,261	0/0:14,0:14:42.11:0,42,492	0/0:1,0:19:44.94:0,45,215	0/0:1,0:20:31.25:0,31,145	0/0:20,0:20:39.05:0,39,432	0/0:20,0:20:51.16:0,51,615	0/0:20,0:20:57.17:0,57,688	0/0:13,0:13:33.10:0,33,397	1/1:1,17:18:48.08:463,48,0	1/1:2,13:15:39.06:376,39,0	1/1:2,17:19:48.07:463,48,0	1/1:0,0:21:55.25:230,55,0	0/0:10,0:10:30.08:0,30,352	0/0:26,0:26:69.08:0,69,812	0/0:16,0:16:45.14:0,45,544	0/0:22,0:22:60.16:0,60,702	0/0:21,0:21:57.14:0,57,654	0/0:16,0:16:39.10:0,39,458	1/1:2,16:18:36.05:347,36,0	1/1:1,15:16:39.06:376,39,0	1/1:5,31:36:84.13:811,84,0	1/1:2,12:14:33.05:319,33,0	0/0:22,0:22:63.17:0,63,739	0/0:24,0:23:69.21:0,69,831	1/1:9,9:18:21.02:203,21,0
chr10	93313909	.	CTT	C	1028.33	PASS	AC=16;AF=0.348;AN=46;BaseQRankSum=8.669;DP=365;FS=6.551;HRun=5;HaplotypeScore=67.4634;InbreedingCoeff=0.9701;MQ=64.36;MQ0=38;MQRankSum=-1.653;QD=8.36;ReadPosRankSum=1.970;VQSLOD=-0.5242;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:29,0:18:16.04:0,16,271	0/0:25,0:9:15.31:0,15,127	0/0:12,0:10:18:0,18,160	./.	./.	0/0:30,0:29:78:0,78,723	0/0:7,0:7:21.01:0,21,188	0/0:16,0:14:42.02:0,42,390	0/0:11,0:10:24.02:0,24,218	1/1:10,5:15:23.66:178,24,0	1/1:10,0:9:17.91:139,18,0	1/1:19,2:17:26.60:191,27,0	./.	0/0:10,0:10:18.45:0,18,156	0/0:10,0:8:23.97:0,24,207	0/0:12,0:11:27.90:0,28,255	0/0:14,0:12:35.79:0,36,309	0/0:17,0:17:45.49:0,45,404	0/0:14,0:10:23.99:0,24,210	1/1:9,4:10:23.77:186,24,0	1/1:8,4:12:14.81:107,15,0	1/1:22,5:25:29.49:239,29,0	1/1:8,3:8:14.64:109,15,0	0/0:15,0:14:38.87:0,39,335	0/0:12,0:11:32.97:0,33,284	1/1:14,0:6:8.93:67,9,0
chr10	93313921	.	C	CT	2330.60	PASS	AC=16;AF=0.348;AN=46;BaseQRankSum=9.350;DP=364;FS=1.660;HRun=8;HaplotypeScore=58.2881;InbreedingCoeff=0.9075;MQ=67.13;MQ0=14;MQRankSum=-2.478;QD=18.80;ReadPosRankSum=1.017;VQSLOD=3.5296;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:26,1:17:2.70:0,3,211	0/0:23,0:9:1.21:0,1,26	0/0:12,0:11:23.14:0,23,218	./.	./.	0/0:32,0:32:81.03:0,81,736	0/0:10,0:10:27.01:0,27,247	0/0:15,0:15:45.02:0,45,408	0/0:12,0:13:30.01:0,30,274	1/1:0,15:15:36.11:415,36,0	1/1:3,9:11:24.07:277,24,0	1/1:1,18:17:36.11:415,36,0	./.	0/0:8,0:8:18:0,18,165	0/0:9,0:9:24:0,24,220	0/0:14,0:13:27:0,27,247	0/0:17,0:16:48.03:0,48,439	0/0:18,1:19:19.42:0,19,432	0/0:13,0:12:33:0,33,297	1/1:2,16:15:33.10:381,33,0	1/1:3,9:12:15.04:173,15,0	1/1:2,27:27:49.35:542,49,0	1/1:4,7:10:18.05:208,18,0	0/0:12,0:12:36.02:0,36,329	0/0:13,0:13:36.02:0,36,329	1/1:4,3:6:9.03:104,9,0
chr10	93314100	.	A	AAATGCCG	5003.66	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=1.007;DP=571;FS=2.746;HRun=0;HaplotypeScore=127.7253;InbreedingCoeff=0.9832;MQ=69.28;MQ0=0;MQRankSum=-10.950;QD=74.68;ReadPosRankSum=-2.726;VQSLOD=4.8760;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:7,1:11:9.03:344,9,0	1/1:4,6:13:30.10:1111,30,0	0/0:10,0:10:21.07:0,21,531	0/0:10,0:10:24.08:0,24,589	0/0:16,0:16:45.15:0,45,1119	1/1:4,9:14:36.12:1350,36,0	1/1:5,10:18:39.13:1401,39,0	0/0:28,0:28:72.24:0,72,1781	0/0:25,0:25:75.26:0,75,1855	0/0:19,0:19:54.16:0,54,1331	0/0:11,0:11:27.09:0,27,658	0/0:34,0:34:90.31:0,90,2292	0/0:26,0:26:78.25:0,78,1913	0/0:25,0:25:63.21:0,63,1549	1/1:5,6:11:21.07:797,21,0	0/0:17,0:17:48.16:0,48,1175	0/0:36,0:36:99:0,102,2616	0/0:28,0:28:72.25:0,72,1847	0/0:18,0:18:45.14:0,45,1102	0/0:16,0:16:48.12:0,48,1025	0/0:28,0:28:81.25:0,81,1960	0/0:12,0:12:33.11:0,33,846	0/0:19,0:19:54.12:0,54,1212	0/0:56,0:56:99:0,163,3962	0/0:12,0:12:36.08:0,36,867	0/0:20,0:20:57.17:0,57,1359	0/0:29,0:29:84.29:0,84,2139	0/0:9,0:9:27.09:0,27,693
chr10	93314203	.	C	CAAGAAGT	6090.20	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.703;DP=656;FS=10.933;HRun=0;HaplotypeScore=141.5690;InbreedingCoeff=0.9986;MQ=92.84;MQ0=0;MQRankSum=-11.756;QD=67.67;ReadPosRankSum=-0.709;VQSLOD=4.7547;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,12:28:39.13:1454,39,0	1/1:1,10:11:27.09:1060,27,0	0/0:25,0:25:66.20:0,66,1478	0/0:35,0:35:93.24:0,93,2020	0/0:24,0:24:63.20:0,63,1494	1/1:1,13:14:21.07:807,21,0	1/1:3,11:15:30.10:1152,30,0	0/0:33,0:33:90.29:0,90,2121	0/0:16,0:16:42.14:0,42,1067	0/0:27,0:27:75.25:0,75,1857	0/0:21,0:21:57.19:0,57,1374	0/0:22,0:22:63.22:0,63,1598	0/0:31,0:31:93.31:0,93,2312	0/0:27,0:27:75.24:0,75,1772	1/1:6,14:21:42.14:1618,42,0	0/0:23,0:23:69.24:0,69,1730	0/0:21,0:21:63.22:0,63,1539	0/0:23,0:23:57.18:0,57,1380	0/0:21,0:21:48.16:0,48,1188	0/0:17,0:17:48.15:0,48,1167	0/0:29,0:29:78.17:0,78,1717	0/0:17,0:17:42.14:0,42,1018	0/0:30,0:30:75.17:0,75,1843	0/0:38,0:38:99:0,105,2452	0/0:24,0:23:69.14:0,69,1563	0/0:30,0:30:84.28:0,84,2030	0/0:15,0:15:42.14:0,42,1051	0/0:17,0:17:51.15:0,51,1242
chr10	93314541	.	G	GAA	3014.35	PASS	AB=0.968;AC=11;AF=0.196;AN=56;BaseQRankSum=8.070;DP=657;FS=3.876;HRun=1;HaplotypeScore=146.6128;InbreedingCoeff=0.8813;MQ=71.08;MQ0=13;MQRankSum=-4.775;QD=23.19;ReadPosRankSum=-3.484;VQSLOD=0.9374;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:25:52.21:622,52,0	1/1:4,0:4:11.88:81,12,0	0/0:28,0:17:48.13:0,48,700	0/1:29,1:19:17.04:17,0,432	0/0:19,0:19:44.64:0,45,630	1/1:13,5:18:47.94:669,48,0	1/1:24,2:28:68.64:925,69,0	0/0:32,0:32:87.60:0,88,1199	0/0:16,0:15:39.11:0,39,561	0/0:19,0:19:40.68:0,41,500	0/0:14,0:19:33.45:0,33,443	0/0:30,0:29:71.16:0,71,881	0/0:20,0:21:53.63:0,54,475	0/0:24,0:24:65.01:0,65,866	1/1:18,5:25:48.24:878,48,0	0/0:24,0:24:60.12:0,60,832	0/0:28,0:27:66.96:0,67,1126	0/0:18,0:17:32.61:0,33,445	0/0:23,0:22:56.95:0,57,845	0/0:14,0:14:36.05:0,36,466	0/0:43,0:43:99:0,108,1552	0/0:25,0:26:73.12:0,73,832	0/0:21,0:21:51.13:0,51,667	0/0:41,0:41:95.62:0,96,1135	0/0:28,0:28:36.91:0,37,667	0/0:21,0:22:57.46:0,57,863	0/0:15,0:15:39.11:0,39,547	0/0:15,0:15:32.80:0,33,373
chr10	93314543	.	A	AGTGT	4497.48	PASS	AB=0.846;AC=39;AF=0.780;AN=50;BaseQRankSum=-0.562;DP=706;FS=1.145;HRun=0;HaplotypeScore=173.0397;InbreedingCoeff=0.3161;MQ=66.76;MQ0=14;MQRankSum=0.474;QD=8.19;ReadPosRankSum=-1.025;VQSLOD=3.6465;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:0.89:0,1,3	./.	./.	./.	0/0:18,0:20:3:0,3,28	1/1:20,0:20:12.04:213,12,0	1/1:33,0:32:11.53:154,12,0	1/1:33,0:32:7.77:48,8,0	0/0:12,0:16:6.01:0,6,74	1/1:21,0:22:14.79:117,15,0	1/1:17,1:19:7.67:92,8,0	1/1:31,0:31:24.26:327,24,0	1/1:20,1:21:13.57:557,14,0	1/1:24,0:24:15.03:229,15,0	1/1:29,0:28:14.96:149,15,0	1/1:18,5:25:3.01:70,3,0	0/0:24,0:26:2.39:0,2,164	0/1:19,0:18:36.28:37,0,36	1/1:25,0:24:5.95:85,6,0	0/1:10,5:15:60.87:61,0,64	0/1:41,11:56:37.19:131,0,37	1/1:26,0:26:25.56:410,26,0	1/1:23,1:24:21.01:365,21,0	1/1:43,0:42:53.23:668,53,0	1/1:29,0:28:33.15:499,33,0	1/1:23,0:23:8.73:121,9,0	1/1:17,0:17:6.46:49,6,0	1/1:14,0:14:6.91:115,7,0
chr10	93314576	.	G	GTGTA	5515.23	PASS	AB=0.922;AC=19;AF=0.352;AN=54;BaseQRankSum=2.365;DP=688;FS=2.096;HRun=0;HaplotypeScore=145.7501;InbreedingCoeff=0.1450;MQ=55.15;MQ0=24;MQRankSum=5.353;QD=13.79;ReadPosRankSum=9.233;VQSLOD=3.6284;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:25.51:0,26,201	./.	0/0:32,0:9:16.70:0,17,119	0/0:31,0:10:23.75:0,24,201	0/0:20,0:20:35.73:0,36,299	0/1:17,0:17:88.62:89,0,112	0/1:30,0:29:13.65:14,0,201	0/0:25,0:23:63.86:0,64,458	0/0:20,0:20:39.40:0,39,356	0/0:22,0:22:29.08:0,29,393	0/1:19,0:18:22.39:22,0,164	0/1:24,3:26:17.33:519,0,17	1/1:14,6:23:57.19:907,57,0	0/1:12,2:16:27.75:414,0,28	0/1:30,0:29:22.77:23,0,138	0/1:20,0:20:8.97:9,0,231	0/0:25,0:25:32.78:0,33,563	0/0:19,0:18:2.34:0,2,155	0/0:17,0:16:1.32:0,1,289	0/1:20,0:20:0.95:1,0,351	0/1:53,0:53:0.11:0,0,593	1/1:17,4:25:37.68:765,38,0	1/1:23,3:27:47.41:722,47,0	1/1:39,6:45:54.72:1157,55,0	0/1:29,4:33:40.02:700,0,40	0/0:25,0:25:21.46:0,21,435	0/0:17,0:17:28.34:0,28,239	0/1:3,8:13:6.19:174,0,6
chr10	93314661	.	TA	T	11935.99	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=20.352;DP=729;FS=6.680;HRun=2;HaplotypeScore=103.0743;InbreedingCoeff=0.9992;MQ=85.76;MQ0=0;MQRankSum=-4.302;QD=35.42;ReadPosRankSum=4.694;VQSLOD=4.7549;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,43:44:99:1517,117,0	1/1:0,10:10:21.07:272,21,0	0/0:33,0:33:99:0,99,1393	0/0:23,0:22:60.17:0,60,834	0/0:19,0:19:57.19:0,57,844	1/1:0,17:17:45.15:584,45,0	1/1:0,34:34:90.29:1168,90,0	0/0:22,0:21:63.17:0,63,897	0/0:29,0:29:84.27:0,84,1238	0/0:27,0:27:78.26:0,78,1169	0/0:17,0:17:48.12:0,48,694	1/1:0,27:27:78.25:1011,78,0	1/1:2,26:28:81.25:1036,81,0	1/1:0,26:26:69.22:895,69,0	1/1:0,36:36:99:1285,99,0	0/0:34,0:34:99:0,102,1507	0/0:26,0:26:75.25:0,75,1119	0/0:25,0:25:69.23:0,69,1034	0/0:27,0:27:75.24:0,75,1095	0/0:14,0:14:42.14:0,42,630	0/0:46,0:46:99:0,135,2003	1/1:2,25:27:75.24:973,75,0	1/1:0,23:23:66.21:857,66,0	1/1:0,35:35:96.31:1246,96,0	1/1:1,21:22:60.20:779,60,0	0/0:24,0:24:72.24:0,72,1079	0/0:26,0:26:78.26:0,78,1169	1/1:0,8:8:24.08:312,24,0
chr10	93314905	.	G	GGTTT	2964.85	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.650;DP=603;FS=30.865;HRun=0;HaplotypeScore=127.2916;InbreedingCoeff=0.9955;MQ=74.11;MQ0=0;MQRankSum=-10.654;QD=49.41;ReadPosRankSum=-1.601;VQSLOD=1.7020;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,14:26:63.52:1442,64,0	1/1:3,3:6:16.30:365,16,0	0/0:30,0:26:71.08:0,71,1281	0/0:16,0:16:37.69:0,38,640	0/0:26,0:26:72.20:0,72,1418	1/1:3,0:10:27.07:490,27,0	1/1:8,0:9:26.93:314,27,0	0/0:30,0:30:80.82:0,81,1408	0/0:18,0:18:51.16:0,51,983	0/0:22,0:22:66.23:0,66,1380	0/0:16,0:16:39.13:0,39,816	0/0:24,0:24:72.23:0,72,1386	0/0:13,0:13:39.08:0,39,701	0/0:30,0:30:84.21:0,84,1506	1/1:5,4:9:27.05:528,27,0	0/0:22,0:22:66.18:0,66,1255	0/0:45,0:45:99:0,135,2596	0/0:24,0:24:72.18:0,72,1415	0/0:29,0:29:87.29:0,87,1741	0/0:13,0:13:36.11:0,36,704	0/0:27,0:27:81.11:0,81,1453	0/0:26,0:26:69.18:0,69,1275	0/0:21,0:21:63.22:0,63,1298	0/0:28,0:28:79.72:0,80,1483	0/0:24,0:24:63.20:0,63,1278	0/0:29,0:29:78.24:0,78,1498	0/0:22,0:22:66.23:0,66,1331	0/0:7,0:7:21.07:0,21,437
chr10	93314908	.	TTCG	T	399.53	PASS	AB=0.914;AC=8;AF=0.143;AN=56;BaseQRankSum=7.951;DP=602;FS=7.770;HRun=0;HaplotypeScore=115.9320;InbreedingCoeff=0.6174;MQ=76.09;MQ0=0;MQRankSum=-6.613;QD=7.26;ReadPosRankSum=-2.922;VQSLOD=1.0351;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,5:24:14.56:244,0,15	1/1:6,0:6:7.81:32,8,0	0/0:31,0:26:62.92:0,63,1174	0/0:20,0:19:21.02:0,21,596	0/0:27,0:27:75.26:0,75,1623	0/1:9,0:9:16.55:23,0,17	1/1:10,0:10:18.67:201,19,0	0/0:29,0:29:81.27:0,81,1618	0/0:18,0:18:51.16:0,51,1056	0/0:22,0:22:66.23:0,66,1418	0/0:17,0:17:48.16:0,48,1018	0/0:24,0:24:72.23:0,72,1506	0/0:13,0:13:33.07:0,33,641	0/0:30,0:30:90.29:0,90,1832	1/1:6,0:6:2.05:38,2,0	0/0:21,0:21:63.20:0,63,1266	0/0:45,0:45:99:0,132,2730	0/0:23,0:23:69.24:0,69,1447	0/0:30,0:30:90.27:0,90,1747	0/0:15,0:15:42.14:0,42,868	0/0:25,0:25:72.22:0,72,1486	0/0:23,0:23:69.22:0,69,1419	0/0:23,0:23:69.24:0,69,1441	0/0:27,0:27:81.26:0,81,1717	0/0:24,0:24:72.25:0,72,1512	0/0:30,0:30:84.27:0,84,1650	0/0:22,0:22:66.19:0,66,1298	0/0:8,0:8:24.08:0,24,494
chr10	93314909	.	TCG	T	633.93	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.521;DP=598;FS=26.081;HRun=0;HaplotypeScore=102.1600;InbreedingCoeff=0.9866;MQ=76.28;MQ0=0;MQRankSum=-9.253;QD=12.43;ReadPosRankSum=0.142;VQSLOD=1.6797;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:29.67:237,30,0	1/1:6,0:6:14.27:50,14,0	0/0:30,1:26:44.87:0,45,933	0/0:20,0:19:21.73:0,22,512	0/0:27,0:27:75.26:0,75,1358	1/1:8,1:9:21.72:126,22,0	1/1:3,6:9:25.56:319,26,0	0/0:29,0:29:81.26:0,81,1359	0/0:17,0:17:51.16:0,51,891	0/0:22,0:22:66.23:0,66,1192	0/0:18,0:18:48.16:0,48,861	0/0:24,0:24:72.23:0,72,1266	0/0:12,0:12:33.08:0,33,542	0/0:30,0:30:90.28:0,90,1540	1/1:4,1:5:12.61:73,13,0	0/0:21,0:21:63.20:0,63,1080	0/0:44,0:44:99:0,132,2283	0/0:23,0:23:69.24:0,69,1234	0/0:31,0:31:93.28:0,93,1539	0/0:17,0:17:48.16:0,48,826	0/0:24,0:24:72.22:0,72,1256	0/0:23,0:23:69.22:0,69,1208	0/0:23,0:23:69.24:0,69,1214	0/0:28,0:28:84.27:0,84,1470	0/0:24,0:24:72.25:0,72,1290	0/0:29,0:29:84.28:0,84,1417	0/0:22,0:22:66.19:0,66,1106	0/0:8,0:8:24.08:0,24,417
chr10	93314918	.	GTTT	G	322.84	PASS	AB=0.857;AC=9;AF=0.161;AN=56;BaseQRankSum=9.219;DP=591;FS=0.000;HRun=8;HaplotypeScore=114.5653;InbreedingCoeff=0.7706;MQ=75.18;MQ0=0;MQRankSum=-8.776;QD=5.77;ReadPosRankSum=1.885;VQSLOD=-0.7226;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,4:24:37.02:118,0,37	1/1:3,3:6:12.30:139,12,0	0/0:30,0:25:42.08:0,42,1124	0/0:19,0:18:35.45:0,35,546	0/0:30,0:30:81.28:0,81,1742	1/1:8,1:9:11.70:64,12,0	1/1:7,3:10:0.47:80,0,0	0/0:29,0:29:69.22:0,69,1407	0/0:17,0:17:51.18:0,51,1098	0/0:24,0:24:66.23:0,66,1415	0/0:21,0:21:54.15:0,54,1084	0/0:29,0:29:84.28:0,84,1755	0/0:8,0:8:24.08:0,24,524	0/0:28,0:28:81.27:0,81,1722	1/1:7,0:7:14.43:68,14,0	0/0:16,0:16:42.14:0,42,917	0/0:48,0:48:99:0,129,2733	0/0:23,0:23:60.21:0,60,1263	0/0:26,0:26:66.21:0,66,1331	0/0:16,0:16:45.15:0,45,982	0/0:21,0:21:60.21:0,60,1289	0/0:21,0:21:57.20:0,57,1243	0/0:25,0:25:69.23:0,69,1435	0/0:29,0:29:84.29:0,84,1817	0/0:19,0:19:57.20:0,57,1229	0/0:27,0:27:78.21:0,78,1591	0/0:20,0:20:51.17:0,51,1078	0/0:9,0:9:24.08:0,24,522
chr10	93314921	.	T	TTTTG	2405.46	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.986;DP=586;FS=11.320;HRun=0;HaplotypeScore=122.7459;InbreedingCoeff=0.9933;MQ=76.10;MQ0=0;MQRankSum=-10.385;QD=43.74;ReadPosRankSum=0.405;VQSLOD=4.0184;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,11:23:45.10:965,45,0	1/1:4,2:6:18.05:373,18,0	0/0:29,0:24:59.99:0,60,928	0/0:21,0:20:40.87:0,41,510	0/0:31,0:31:84.28:0,84,1480	1/1:3,7:10:21.05:523,21,0	1/1:8,1:9:17.99:358,18,0	0/0:28,0:28:72:0,72,1168	0/0:17,0:17:51.17:0,51,935	0/0:24,0:24:66.21:0,66,1159	0/0:21,0:21:56.98:0,57,956	0/0:28,0:28:84.28:0,84,1501	0/0:8,0:8:24.08:0,24,443	0/0:27,0:27:81.27:0,81,1463	1/1:3,4:7:20.87:360,21,0	0/0:15,0:15:42.14:0,42,741	0/0:47,0:47:99:0,129,2349	0/0:21,0:21:60.17:0,60,1058	0/0:25,0:25:63.19:0,63,1083	0/0:16,0:16:45.15:0,45,830	0/0:21,0:21:60.18:0,60,1073	0/0:20,0:20:57.20:0,57,1051	0/0:27,0:27:72.22:0,72,1256	0/0:30,0:30:87.29:0,87,1557	0/0:20,0:20:57.18:0,57,1021	0/0:28,0:28:78.21:0,78,1365	0/0:19,0:19:51.16:0,51,893	0/0:8,0:8:24.08:0,24,442
chr10	93315032	.	G	GC	2068.40	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.051;DP=664;FS=34.763;HRun=0;HaplotypeScore=83.7926;InbreedingCoeff=0.9976;MQ=76.90;MQ0=0;MQRankSum=-11.999;QD=34.47;ReadPosRankSum=0.597;VQSLOD=1.5336;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:45.15:632,45,0	1/1:1,8:9:27.09:384,27,0	0/0:14,0:14:42.12:0,42,568	0/0:16,0:16:44.99:0,45,566	0/0:20,0:20:57.17:0,57,778	1/1:0,9:9:27.09:367,27,0	1/1:0,16:16:45.12:607,45,0	0/0:23,0:23:69.22:0,69,951	0/0:20,0:20:60.20:0,60,838	0/0:29,0:29:84.28:0,84,1175	0/0:29,0:29:84.28:0,84,1169	0/0:30,0:30:90.29:0,90,1240	0/0:21,0:21:63.21:0,63,879	0/0:32,0:32:96.29:0,96,1305	1/1:0,6:6:18.06:254,18,0	0/0:20,0:20:60.20:0,60,839	0/0:45,0:45:99:0,135,1886	0/0:35,0:35:99:0,105,1464	0/0:20,0:20:60.20:0,60,838	0/0:16,0:16:48.13:0,48,636	0/0:52,0:52:99:0,153,2101	0/0:23,0:23:69.21:0,69,946	0/0:24,0:24:72.24:0,72,1006	0/0:35,0:35:99:0,105,1468	0/0:27,0:27:75.24:0,75,1023	0/0:38,0:38:99:0,114,1580	0/0:20,0:20:57.19:0,57,796	0/0:15,0:15:45.15:0,45,629
chr10	93315058	.	GACC	G	2019.90	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.713;DP=651;FS=24.781;HRun=0;HaplotypeScore=105.5072;InbreedingCoeff=0.9834;MQ=80.17;MQ0=0;MQRankSum=-10.892;QD=31.08;ReadPosRankSum=-2.295;VQSLOD=1.6442;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:27:48.15:746,48,0	1/1:0,6:6:18.06:289,18,0	0/0:18,0:18:45.10:0,45,900	0/0:16,0:16:48.16:0,48,1052	0/0:27,0:27:78.27:0,78,1715	1/1:0,5:5:12.04:193,12,0	1/1:4,17:21:48.16:770,48,0	0/0:18,0:18:48.16:0,48,1062	0/0:20,0:20:54.19:0,54,1192	0/0:25,0:25:69.24:0,69,1501	0/0:25,0:25:66.23:0,66,1431	0/0:30,0:30:87.30:0,87,1880	0/0:19,0:19:57.20:0,57,1257	0/0:29,0:29:84.29:0,84,1850	1/1:2,4:6:12.04:193,12,0	0/0:19,0:19:54.19:0,54,1176	0/0:42,0:42:99:0,114,2517	0/0:30,0:30:87.30:0,87,1921	0/0:13,0:13:33.11:0,33,710	0/0:18,0:18:54.19:0,54,1181	0/0:49,0:49:99:0,138,3030	0/0:24,0:24:69.19:0,69,1476	0/0:23,0:23:66.23:0,66,1418	0/0:35,0:35:99:0,99,2136	0/0:32,0:32:90.31:0,90,1945	0/0:38,0:38:99:0,108,2374	0/0:25,0:24:75.26:0,75,1629	0/0:11,0:11:30.10:0,30,661
chr10	93315150	.	G	GA	2991.46	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=15.715;DP=700;FS=2.205;HRun=6;HaplotypeScore=87.7342;InbreedingCoeff=0.9959;MQ=81.41;MQ0=0;MQRankSum=-3.856;QD=22.49;ReadPosRankSum=1.706;VQSLOD=2.9975;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,54:55:99:1645,132,0	1/1:3,6:9:15.05:189,15,0	0/0:22,0:22:28.12:0,28,415	0/0:19,0:19:37.87:0,38,381	0/0:27,0:27:74.82:0,75,733	1/1:0,0:15:40.18:205,40,0	1/1:4,0:31:74.90:388,75,0	0/0:29,0:30:86.21:0,86,853	0/0:15,0:15:45.09:0,45,453	0/0:28,0:28:71.90:0,72,734	0/0:21,0:21:60.12:0,60,602	0/0:26,0:26:75.13:0,75,744	0/0:26,0:26:66.13:0,66,666	0/0:28,0:28:72.15:0,72,733	1/1:0,23:23:60.16:739,60,0	0/0:21,0:21:60.11:0,60,598	0/0:41,0:41:99:0,120,1198	0/0:20,0:20:51.05:0,51,502	0/0:19,0:19:50.96:0,51,493	0/0:23,0:23:63.11:0,63,632	0/0:32,0:32:93.16:0,93,927	0/0:20,0:20:60.07:0,60,592	0/0:13,0:13:39.09:0,39,397	0/0:36,0:36:99:0,102,1029	0/0:17,0:17:29.62:0,30,276	0/0:47,0:47:99:0,120,1211	0/0:23,0:22:69.11:0,69,687	0/0:13,0:13:39.07:0,39,389
chr10	93315556	.	GTACGAGGC	G	3098.67	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.388;DP=700;FS=1.297;HRun=0;HaplotypeScore=180.0618;InbreedingCoeff=0.9756;MQ=75.47;MQ0=0;MQRankSum=-9.762;QD=67.36;ReadPosRankSum=-1.115;VQSLOD=3.1556;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,169,6983	0/0:8,0:8:24.08:0,24,1079	0/0:14,0:16:10.54:0,11,1395	0/0:12,0:12:21.54:0,22,1310	0/0:22,0:22:66.23:0,66,2801	1/1:0,20:20:51.18:1490,51,0	1/1:0,26:26:60.21:1730,60,0	0/0:20,0:20:60.21:0,60,2451	0/0:27,0:27:81.28:0,81,3383	0/0:32,0:32:96.33:0,96,4034	0/0:24,0:24:72.25:0,72,3155	0/0:26,0:26:78.27:0,78,3289	0/0:21,0:21:57.20:0,57,2483	0/0:29,0:29:78.27:0,78,3325	0/0:36,0:36:99:0,108,4421	0/0:26,0:26:78.27:0,78,3327	0/0:18,0:18:54.19:0,54,1990	0/0:19,0:19:54.19:0,54,2201	0/0:14,0:14:39.13:0,39,1767	0/0:15,0:15:45.15:0,45,2030	0/0:56,0:56:99:0,160,6976	0/0:16,0:16:48.14:0,48,2000	0/0:16,0:16:45.15:0,45,1967	0/0:33,0:33:99:0,99,4328	0/0:26,0:26:78.25:0,78,3303	0/0:31,0:31:93.32:0,93,4194	0/0:39,0:39:99:0,117,4944	0/0:14,0:14:39.13:0,39,1734
chr10	93315613	.	C	CGCCTGACTTTGTACTT	1363.36	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.230;DP=659;FS=3.222;HRun=0;HaplotypeScore=283.6360;InbreedingCoeff=0.9933;MQ=88.31;MQ0=0;MQRankSum=-4.786;QD=151.48;ReadPosRankSum=0.699;VQSLOD=3.1147;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,5290	0/0:8,0:8:21.07:0,21,1028	0/0:27,0:27:77.85:0,78,3243	0/0:24,0:24:66.22:0,66,2640	0/0:15,0:15:45.14:0,45,1987	0/0:19,0:19:45.14:0,45,2021	0/0:33,0:33:75.26:0,75,3414	0/0:26,0:26:75.25:0,75,3005	0/0:27,0:27:81.28:0,81,3837	0/0:25,0:25:72.23:0,72,3276	0/0:13,0:13:36.12:0,36,1637	0/0:25,0:25:72.23:0,72,3078	0/0:17,0:17:48.16:0,48,2247	0/0:34,0:34:99:0,99,4400	0/0:25,0:25:72.23:0,72,2836	0/0:20,0:20:60.19:0,60,2759	1/1:5,4:9:24.04:1457,24,0	0/0:27,0:27:81.26:0,81,3322	0/0:21,0:21:57.19:0,57,2280	0/0:17,0:17:45.14:0,45,1878	0/0:40,0:40:99:0,117,5059	0/0:16,0:16:48.16:0,48,2338	0/0:11,0:11:30.08:0,30,1316	0/0:35,0:34:99:0,105,4749	0/0:25,0:25:72.23:0,72,3215	0/0:34,0:34:99:0,99,4639	0/0:28,0:28:84.27:0,84,3734	0/0:16,0:16:48.16:0,48,2241
chr10	93315624	.	C	CCGG	529.16	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.253;DP=673;FS=0.000;HRun=0;HaplotypeScore=102.1960;InbreedingCoeff=0.9977;MQ=88.12;MQ0=0;MQRankSum=-5.342;QD=37.80;ReadPosRankSum=-1.764;VQSLOD=3.6995;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,120,1902	0/0:11,0:11:27.09:0,27,434	0/0:25,0:25:57.18:0,57,859	0/0:23,0:23:57.19:0,57,869	0/0:21,0:21:60.19:0,60,937	0/0:17,0:17:45.14:0,45,702	0/0:32,0:32:78.22:0,78,1225	0/0:24,0:24:57.19:0,57,916	0/0:24,0:24:66.22:0,66,1058	0/0:26,0:26:69.24:0,69,1109	0/0:15,0:15:30.10:0,30,482	0/0:24,0:24:63.16:0,63,958	0/0:17,0:17:51.17:0,51,820	0/0:34,0:34:84.29:0,84,1348	0/0:24,0:24:63.21:0,63,1006	0/0:20,0:20:60.20:0,60,961	1/1:6,8:14:30.10:624,30,0	0/0:27,0:27:75.26:0,75,1201	0/0:19,0:19:48.15:0,48,748	0/0:16,0:16:45.15:0,45,716	0/0:47,0:47:99:0,132,2095	0/0:16,0:16:39.13:0,39,626	0/0:15,0:15:36.12:0,36,578	0/0:35,0:34:93.29:0,93,1469	0/0:29,0:29:78.24:0,78,1209	0/0:30,0:30:75.24:0,75,1158	0/0:28,0:28:78.27:0,78,1253	0/0:15,0:15:39.13:0,39,627
chr10	93315640	.	T	TCTCCA	819.12	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.095;DP=669;FS=6.263;HRun=0;HaplotypeScore=125.0781;InbreedingCoeff=0.9989;MQ=81.99;MQ0=0;MQRankSum=-5.860;QD=58.51;ReadPosRankSum=-0.849;VQSLOD=4.1349;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,117,2383	0/0:11,0:11:30.10:0,30,621	0/0:15,0:15:39.13:0,39,729	0/0:23,0:23:47.86:0,48,835	0/0:23,0:23:69.22:0,69,1390	0/0:21,0:21:54.18:0,54,1094	0/0:31,0:31:84.27:0,84,1686	0/0:24,0:24:63.21:0,63,1255	0/0:24,0:24:63.20:0,63,1269	0/0:24,0:24:63.18:0,63,1265	0/0:13,0:13:36.12:0,36,746	0/0:23,0:23:66.23:0,66,1357	0/0:20,0:20:54.17:0,54,1077	0/0:30,0:30:84.29:0,84,1725	0/0:20,0:20:54.19:0,54,1120	0/0:22,0:22:63.22:0,63,1295	1/1:2,11:14:33.11:914,33,0	0/0:28,0:29:80.53:0,81,1678	0/0:25,0:25:60.19:0,60,1173	0/0:13,0:13:36.12:0,36,735	0/0:50,0:50:99:0,141,2868	0/0:20,0:20:57.20:0,57,1181	0/0:17,0:17:51.18:0,51,1056	0/0:35,0:34:93.32:0,93,1926	0/0:30,0:30:87.29:0,87,1758	0/0:24,0:24:69.24:0,69,1431	0/0:28,0:28:84.27:0,84,1675	0/0:17,0:17:42.14:0,42,871
chr10	93315950	.	AC	A	8154.13	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=13.387;DP=622;FS=0.000;HRun=6;HaplotypeScore=68.9408;InbreedingCoeff=0.9976;MQ=83.00;MQ0=0;MQRankSum=-2.298;QD=27.64;ReadPosRankSum=4.295;VQSLOD=5.2115;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,46:52:99:1419,132,0	1/1:1,7:8:21.05:226,21,0	0/0:19,0:19:45.11:0,45,550	0/0:17,0:17:28.05:0,28,493	0/0:16,0:16:45.15:0,45,590	0/0:20,0:20:54.18:0,54,710	0/0:24,0:24:60.19:0,60,788	0/0:20,0:20:48.14:0,48,606	0/0:21,0:21:63.20:0,63,829	0/0:19,0:19:54.17:0,54,698	0/0:8,0:8:21.07:0,21,275	1/1:1,23:24:60.15:645,60,0	1/1:1,27:28:75.19:803,75,0	1/1:3,20:23:51.13:548,51,0	1/1:0,27:27:75.19:806,75,0	0/0:19,0:19:57.19:0,57,749	1/1:2,37:39:99:1096,102,0	0/0:32,0:32:90.29:0,90,1184	0/0:28,0:28:78.23:0,78,995	0/0:15,0:15:45.15:0,45,592	0/0:29,0:29:81.25:0,81,1050	1/1:1,17:18:48.12:516,48,0	1/1:1,16:17:42.10:451,42,0	1/1:1,28:29:75.19:806,75,0	1/1:2,22:24:60.15:645,60,0	0/0:21,0:21:54.17:0,54,706	0/0:19,0:19:54.18:0,54,709	1/1:0,6:6:18.05:193,18,0
chr10	93316843	.	GGAGAGAGAGAGAGAGAGAGAGA	G	1299	PASS	AB=0.864;AC=16;AF=0.348;AN=46;BaseQRankSum=2.935;DP=512;FS=15.744;HRun=0;HaplotypeScore=246.4715;InbreedingCoeff=0.4995;MQ=73.51;MQ0=18;MQRankSum=0.338;QD=8.17;ReadPosRankSum=-0.549;VQSLOD=1.2199;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:9.03:0,9,327	0/0:11,0:11:6.02:0,6,234	./.	./.	1/1:18,0:18:2.54:24,3,0	0/0:14,0:14:10.28:0,10,429	0/0:19,0:19:18.04:0,18,623	0/0:25,0:24:2.04:0,2,6	1/1:5,3:8:3.01:172,3,0	1/1:16,8:24:10.75:308,11,0	./.	0/0:16,0:16:27.07:0,27,764	0/0:11,0:11:9.03:0,9,290	0/0:10,0:10:12.04:0,12,471	0/0:13,0:14:13.58:0,14,301	1/1:11,0:11:3:25,3,0	0/0:18,0:18:3.01:0,3,136	1/1:18,0:19:3.91:230,4,0	0/1:16,0:16:0.30:44,0,0	./.	1/1:24,0:24:5.99:50,6,0	0/0:4,0:4:6:0,6,117	0/0:8,0:8:3.01:0,3,125	0/0:22,0:23:27.04:0,27,829	0/0:15,0:13:9.02:0,9,194	0/1:10,6:16:69.86:181,0,70	1/1:20,1:22:4:411,4,0	./.
chr10	93319876	.	C	CT	17148.18	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=19.991;DP=772;FS=0.555;HRun=1;HaplotypeScore=121.2879;InbreedingCoeff=0.9978;MQ=84.29;MQ0=0;MQRankSum=-2.572;QD=39.69;ReadPosRankSum=2.855;VQSLOD=4.5342;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1420	0/0:14,0:14:42.14:0,42,543	0/0:23,0:23:66.12:0,66,817	0/0:22,0:22:62.84:0,63,743	1/1:1,27:28:75.25:1123,75,0	0/0:24,0:24:72.23:0,72,933	0/0:28,0:28:81.26:0,81,1052	1/1:4,23:27:72.22:1021,72,0	1/1:0,33:33:87.29:1304,87,0	1/1:1,40:41:99:1767,120,0	1/1:0,18:18:51.17:764,51,0	0/0:30,0:30:81.26:0,81,1052	0/0:22,0:22:63.17:0,63,799	0/0:21,0:21:63.20:0,63,817	0/0:25,0:25:69.22:0,69,896	1/1:2,32:34:99:1458,99,0	1/1:1,36:37:81.27:1214,81,0	1/1:0,34:34:90.30:1349,90,0	1/1:2,23:25:72.20:991,72,0	1/1:1,37:38:99:1662,111,0	1/1:4,51:55:99:2068,138,0	0/0:28,0:28:78.25:0,78,1009	0/0:16,0:16:48.14:0,48,598	0/0:28,0:28:84.27:0,84,1089	0/0:22,0:22:57.16:0,57,709	1/1:2,32:34:99:1447,99,0	1/1:2,19:21:51.17:755,51,0	1/1:0,7:7:15.05:225,15,0
chr10	93320915	.	GGA	G	13252.14	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=9.577;DP=655;FS=19.956;HRun=0;HaplotypeScore=159.1491;InbreedingCoeff=0.9995;MQ=83.64;MQ0=0;MQRankSum=-13.221;QD=44.92;ReadPosRankSum=-0.764;VQSLOD=3.4269;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,2628	0/0:12,0:12:36.12:0,36,702	0/0:19,0:19:54.19:0,54,1084	0/0:28,0:28:79.51:0,80,1520	1/1:1,21:22:54.18:873,54,0	0/0:24,0:24:72.25:0,72,1462	0/0:38,0:38:99:0,114,2312	1/1:0,31:31:93.32:1511,93,0	1/1:0,23:23:66.23:1074,66,0	1/1:3,30:33:99:1584,99,0	1/1:1,12:13:27.09:439,27,0	0/0:15,0:15:45.15:0,45,914	0/0:20,0:20:60.21:0,60,1208	0/0:33,0:33:96.33:0,96,1937	0/0:31,0:31:93.31:0,93,1856	1/1:2,19:21:57.19:921,57,0	1/1:1,27:28:81.12:1312,81,0	1/1:1,13:14:39.09:606,39,0	1/1:2,10:12:36.11:565,36,0	1/1:2,15:17:42.14:679,42,0	1/1:0,26:26:66.13:1074,66,0	0/0:22,0:22:63.20:0,63,1228	0/0:20,0:20:60.21:0,60,1219	0/0:32,0:32:96.33:0,96,1947	0/0:21,0:21:63.22:0,63,1280	1/1:2,26:28:84.29:1353,84,0	1/1:0,19:19:54.18:877,54,0	1/1:1,7:8:24.08:386,24,0
chr10	93320953	.	AGG	A	11497.93	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=14.057;DP=687;FS=1.261;HRun=3;HaplotypeScore=175.3863;InbreedingCoeff=0.9996;MQ=80.77;MQ0=2;MQRankSum=-13.061;QD=37.57;ReadPosRankSum=-2.535;VQSLOD=3.4431;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1870	0/0:15,0:15:45.15:0,45,822	0/0:20,0:20:59.76:0,60,1007	0/0:25,0:25:68.32:0,68,1093	1/1:3,22:25:63.19:918,63,0	0/0:30,0:30:87.30:0,87,1641	0/0:38,0:38:99:0,114,2021	1/1:6,14:20:57.06:750,57,0	1/1:5,25:29:75.17:1057,75,0	1/1:3,25:28:78.21:1128,78,0	1/1:1,11:12:30.10:450,30,0	0/0:24,0:24:72.23:0,72,1329	0/0:23,0:23:69.24:0,69,1325	0/0:35,0:35:99:0,99,1849	0/0:37,0:37:99:0,108,2079	1/1:1,19:20:48.15:712,48,0	1/1:2,22:24:59.69:861,60,0	1/1:1,17:18:51.13:754,51,0	1/1:3,16:19:51.13:733,51,0	1/1:0,21:21:60.20:916,60,0	1/1:3,30:33:75.59:1002,76,0	0/0:20,0:20:57.18:0,57,1064	0/0:14,0:14:42.14:0,42,790	0/0:35,0:35:99:0,105,1988	0/0:30,0:30:90.21:0,90,1648	1/1:1,26:27:78.26:1193,78,0	1/1:4,14:17:45.14:657,45,0	1/1:3,8:11:24.08:367,24,0
chr10	93321405	.	TTTGCTTGC	T	8351.08	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=11.605;DP=594;FS=39.411;HRun=0;HaplotypeScore=187.4095;InbreedingCoeff=0.9430;MQ=55.73;MQ0=3;MQRankSum=-9.440;QD=30.37;ReadPosRankSum=-0.874;VQSLOD=2.3114;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:66.22:0,66,2393	0/0:9,0:9:18.06:0,18,602	0/0:40,0:24:42.14:0,42,1378	0/0:45,0:28:43.87:0,44,1504	1/1:7,9:16:18.06:472,18,0	0/0:24,0:24:48.16:0,48,1857	0/0:14,0:13:27.09:0,27,1136	1/1:14,24:38:72.07:1333,72,0	1/1:7,15:22:39.13:1023,39,0	1/1:12,8:20:15.05:356,15,0	1/1:3,7:10:3.01:79,3,0	0/0:20,0:19:42.14:0,42,1643	0/0:17,0:16:45.15:0,45,1850	0/0:10,0:10:21.07:0,21,863	0/0:18,0:18:48.14:0,48,1569	1/1:6,15:21:39.09:965,39,0	1/1:10,13:23:24.08:622,24,0	1/1:3,9:12:21.07:552,21,0	1/1:7,9:16:27.07:588,27,0	1/1:10,7:17:15.01:332,15,0	1/1:16,20:35:24.01:506,24,0	0/0:20,0:20:30.10:0,30,1020	0/0:12,0:12:27.09:0,27,1006	0/0:38,0:38:72.25:0,72,2829	0/0:19,0:19:48.16:0,48,1722	1/1:11,13:24:36.11:893,36,0	1/1:8,7:15:21.07:552,21,0	1/1:4,1:5:3.01:79,3,0
chr10	93321430	.	GGTGTGT	G	444	PASS	AC=18;AF=0.500;AN=36;BaseQRankSum=4.582;DP=539;FS=1.378;HRun=0;HaplotypeScore=172.3806;InbreedingCoeff=0.5189;MQ=40.51;MQ0=32;MQRankSum=-3.294;QD=3.64;ReadPosRankSum=3.177;VQSLOD=2.3914;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:32:21.99:0,22,433	0/0:9,0:9:3.01:0,3,78	./.	./.	1/1:11,0:9:6.02:84,6,0	0/0:18,0:18:2.98:0,3,21	0/0:21,0:18:3.01:0,3,40	./.	1/1:14,0:13:12.04:168,12,0	./.	./.	0/0:24,0:23:4.46:0,4,20	./.	./.	0/0:23,0:22:12.04:0,12,300	1/1:15,0:15:6.02:84,6,0	0/0:29,0:28:21.47:0,21,407	./.	1/1:15,0:14:3.01:42,3,0	1/1:9,0:8:6.02:84,6,0	0/0:39,0:36:0:0,0,0	./.	1/1:9,0:8:3:25,3,0	1/1:29,0:29:0.32:1,0,0	0/0:20,5:25:3.01:0,3,34	1/1:11,0:11:3.01:42,3,0	1/1:8,0:8:3.01:42,3,0	./.
chr10	93321442	.	TGTGTGTGTGTGTGTGTGTGTGTG	T	2689.64	PASS	AB=0.951;AC=15;AF=0.268;AN=56;BaseQRankSum=7.472;DP=530;FS=7.328;HRun=0;HaplotypeScore=262.7374;InbreedingCoeff=0.2467;MQ=37.96;MQ0=43;MQRankSum=-7.776;QD=21.18;ReadPosRankSum=6.880;VQSLOD=1.0663;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:34:57.97:0,58,3083	0/0:9,0:9:15.05:0,15,927	0/0:29,0:7:12.86:0,13,198	0/0:33,0:6:15.01:0,15,174	1/1:6,2:6:6.02:331,6,0	0/0:23,0:19:33.11:0,33,2000	0/0:25,0:22:42.14:0,42,1686	0/1:26,0:24:57.79:58,0,331	1/1:11,4:14:15.02:679,15,0	0/1:6,0:4:33.85:46,0,34	0/1:4,0:4:0:0,0,0	0/0:26,0:23:41.84:0,42,2092	0/0:18,0:16:33.08:0,33,897	0/0:14,0:14:30.10:0,30,1547	0/0:27,0:26:45.15:0,45,2483	1/1:10,2:12:15.05:481,15,0	0/0:32,0:28:53.37:0,53,2775	0/1:12,0:10:43.09:232,0,43	0/1:12,1:12:99:204,0,108	0/1:7,2:8:29.09:322,0,29	0/0:39,0:33:6.93:0,7,77	0/0:16,0:12:15.05:0,15,815	0/0:13,0:12:10.85:0,11,533	0/0:35,0:33:57.11:0,57,2741	0/0:23,0:22:20.90:0,21,1017	0/1:10,1:11:99:294,0,120	0/1:8,1:8:62.95:204,0,63	0/1:2,0:1:0:0,0,0
chr10	93322780	.	GCATC	G	14903.64	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=15.632;DP=735;FS=3.221;HRun=0;HaplotypeScore=138.6141;InbreedingCoeff=0.9957;MQ=75.43;MQ0=0;MQRankSum=-12.451;QD=49.03;ReadPosRankSum=1.621;VQSLOD=5.7545;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,172,4573	0/0:10,0:10:30.10:0,30,784	0/0:30,0:30:70.87:0,71,1837	0/0:33,0:32:60:0,60,1999	1/1:1,30:31:75.26:1452,75,0	0/0:16,0:16:42.14:0,42,1147	0/0:35,0:35:99:0,102,2734	1/1:3,24:27:72.22:1332,72,0	1/1:2,27:29:81.28:1569,81,0	1/1:3,17:20:48.16:931,48,0	1/1:0,20:20:57.20:1104,57,0	0/0:17,0:17:51.16:0,51,1337	0/0:33,0:33:99:0,99,2675	0/0:23,0:23:66.23:0,66,1805	0/0:39,0:39:99:0,111,2982	1/1:3,18:21:48.16:930,48,0	0/0:30,0:30:87.30:0,87,2384	1/1:3,22:25:63.22:1201,63,0	1/1:2,16:18:48.15:897,48,0	1/1:2,26:28:72.25:1395,72,0	1/1:2,25:27:51.17:988,51,0	0/0:26,0:26:78.27:0,78,2131	0/0:18,0:18:51.14:0,51,1309	0/0:34,0:34:99:0,102,2689	0/0:28,0:28:84.29:0,84,2223	1/1:1,23:24:69.22:1302,69,0	1/1:1,28:29:81.28:1570,81,0	1/1:1,4:5:12.04:233,12,0
chr10	93323580	.	AC	A	12595.87	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=11.013;DP=741;FS=16.422;HRun=1;HaplotypeScore=78.6641;InbreedingCoeff=0.9997;MQ=91.04;MQ0=0;MQRankSum=-5.212;QD=39.24;ReadPosRankSum=1.027;VQSLOD=3.4367;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.30:0,96,1508	0/0:10,0:10:27.09:0,27,432	0/0:34,0:34:99:0,99,1550	0/0:29,0:28:72.23:0,72,1091	1/1:0,18:18:51.17:713,51,0	0/0:29,0:29:87.30:0,87,1391	0/0:34,0:34:99:0,102,1630	1/1:0,28:28:81.23:1078,81,0	1/1:0,21:21:63.21:881,63,0	1/1:0,24:24:69.22:949,69,0	1/1:0,22:22:60.20:839,60,0	0/0:21,0:21:63.21:0,63,1001	0/0:23,0:23:69.24:0,69,1102	0/0:26,0:26:78.27:0,78,1242	0/0:32,0:32:96.31:0,96,1509	1/1:0,24:24:66.22:923,66,0	0/0:36,0:36:99:0,105,1642	1/1:0,21:21:54.18:750,54,0	1/1:0,23:23:66.19:903,66,0	1/1:0,28:28:84.28:1175,84,0	1/1:0,46:46:99:1804,129,0	0/0:27,0:27:81.26:0,81,1250	0/0:29,0:29:84.29:0,84,1333	0/0:35,0:35:99:0,99,1583	0/0:23,0:23:69.23:0,69,1083	1/1:0,27:27:81.24:1113,81,0	1/1:0,29:29:78.24:1089,78,0	1/1:0,10:10:27.09:378,27,0
chr10	93323678	.	C	CT	4504.49	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=11.507;DP=606;FS=7.245;HRun=2;HaplotypeScore=118.6695;InbreedingCoeff=0.9905;MQ=75.40;MQ0=0;MQRankSum=-4.886;QD=17.19;ReadPosRankSum=-0.635;VQSLOD=4.2724;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.14:0,81,890	0/0:10,0:10:24.07:0,24,285	0/0:23,0:23:46.11:0,46,555	0/0:22,0:23:32.96:0,33,481	1/1:21,0:21:55.85:374,56,0	0/0:25,0:25:62.58:0,63,457	0/0:33,0:33:85.59:0,86,607	1/1:24,0:24:62.19:467,62,0	1/1:18,1:19:46.87:288,47,0	1/1:16,1:17:47.16:339,47,0	1/1:4,0:4:11.70:69,12,0	0/0:30,0:30:71.24:0,71,497	0/0:32,0:32:89.16:0,89,648	0/0:22,0:22:62.36:0,62,432	0/0:17,0:17:51.15:0,51,620	1/1:16,1:17:50.03:339,50,0	0/0:25,0:25:66.10:0,66,770	1/1:31,0:31:82.25:540,82,0	1/1:24,1:25:70.34:484,70,0	1/1:13,0:13:32.18:201,32,0	1/1:45,0:45:99:705,109,0	0/0:19,0:22:55.75:0,56,373	0/0:14,0:14:38.74:0,39,285	0/0:20,0:20:53.58:0,54,381	0/0:20,0:19:49.73:0,50,333	1/1:13,0:13:32.46:233,32,0	1/1:26,1:27:65.38:389,65,0	1/1:6,0:6:11.77:76,12,0
chr10	93323679	.	T	TTTC	15486.69	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-15.806;DP=617;FS=9.216;HRun=0;HaplotypeScore=110.5548;InbreedingCoeff=0.9825;MQ=73.68;MQ0=0;MQRankSum=-4.259;QD=56.32;ReadPosRankSum=-1.286;VQSLOD=6.4008;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.28:0,84,1393	0/0:10,0:10:24.08:0,24,420	0/0:21,0:21:60.04:0,60,870	0/0:24,0:24:7.55:0,8,723	1/1:6,16:22:57.20:1247,57,0	0/0:25,0:25:63.18:0,63,779	0/0:33,0:33:87.23:0,87,1029	1/1:4,21:25:66.21:1342,66,0	1/1:2,18:21:51.17:1145,51,0	1/1:4,14:19:54.18:1170,54,0	1/1:1,4:5:15.05:320,15,0	0/0:29,0:29:72.19:0,72,841	0/0:32,0:32:90.24:0,90,1076	0/0:22,0:22:63.19:0,63,736	0/0:17,0:17:51.17:0,51,896	1/1:4,13:17:51.17:1118,51,0	0/0:25,0:25:69.18:0,69,1136	1/1:10,19:30:84.27:1777,84,0	1/1:6,23:29:85.13:1682,85,0	1/1:0,11:12:32.99:594,33,0	1/1:18,31:49:99:2491,118,0	0/0:22,0:22:57.12:0,57,636	0/0:15,0:15:39.12:0,39,488	0/0:20,0:20:54.16:0,54,648	0/0:19,0:18:51.15:0,51,590	1/1:2,12:15:39.12:841,39,0	1/1:8,17:26:72.21:1497,72,0	1/1:2,3:5:12.04:262,12,0
chr10	93323680	.	TC	T	4599.53	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-8.705;DP=609;FS=6.046;HRun=9;HaplotypeScore=116.0931;InbreedingCoeff=0.9838;MQ=73.93;MQ0=0;MQRankSum=1.279;QD=21.20;ReadPosRankSum=3.975;VQSLOD=4.3643;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.20:0,72,822	0/0:10,0:10:21.06:0,21,241	0/0:22,0:22:48.02:0,48,510	0/0:24,0:24:32.84:0,33,462	0/0:21,0:21:45.29:0,45,232	1/1:5,19:25:47.05:418,47,0	1/1:5,28:33:72.03:659,72,0	0/0:23,0:24:39.94:0,40,228	0/0:22,0:22:45.18:0,45,258	0/0:17,0:18:35.30:0,35,222	0/0:5,0:5:11.61:0,12,64	1/1:1,28:29:69.02:632,69,0	1/1:6,26:32:40.41:624,40,0	1/1:0,22:22:63.03:576,63,0	0/0:17,0:17:48.14:0,48,553	0/0:17,0:17:30.80:0,31,196	0/0:24,0:24:63.17:0,63,716	0/0:30,0:30:67.46:0,67,354	0/0:25,0:26:54.42:0,54,332	0/0:11,0:11:22.94:0,23,120	0/0:46,0:47:96.08:0,96,521	1/1:5,16:21:53.98:485,54,0	1/1:2,13:15:33.01:302,33,0	1/1:1,19:20:51.02:467,51,0	1/1:4,16:19:48.02:438,48,0	0/0:15,0:15:33.68:0,34,179	0/0:24,0:25:63.74:0,64,350	0/0:5,0:5:8.71:0,9,48
chr10	93324062	.	CCACACACACACACACA	C	6644.99	PASS	AB=0.721;AC=31;AF=0.574;AN=54;BaseQRankSum=6.890;DP=750;FS=12.707;HRun=0;HaplotypeScore=266.8970;InbreedingCoeff=0.3354;MQ=64.87;MQ0=26;MQRankSum=-3.057;QD=14.02;ReadPosRankSum=-0.850;VQSLOD=2.1635;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:45:6.02:223,6,0	1/1:10,0:10:3.46:24,3,0	./.	0/0:56,0:25:5.98:0,6,57	1/1:9,6:14:14.41:303,14,0	1/1:12,0:20:7.91:333,8,0	1/1:16,0:25:2.96:112,3,0	0/1:14,4:15:4.49:179,0,4	0/1:7,13:20:65.75:766,0,66	1/1:19,11:30:21.06:513,21,0	1/1:9,6:17:6.02:167,6,0	0/0:24,0:27:30.10:0,30,1225	0/0:19,0:21:12.51:0,13,570	0/0:18,0:18:18.06:0,18,959	1/1:14,0:27:14.29:557,14,0	0/1:13,12:26:99:971,0,104	0/1:19,0:28:2.27:73,0,2	1/1:19,0:18:6.01:181,6,0	0/1:14,7:21:9.19:503,0,9	1/1:14,10:24:5.98:75,6,0	0/1:34,24:57:8.95:153,0,9	0/0:13,0:15:12.02:0,12,410	0/0:15,0:15:3.01:0,3,191	0/0:29,0:46:60.18:0,60,2762	0/0:22,0:22:23.21:0,23,1125	0/1:22,10:32:31.28:897,0,31	1/1:11,10:21:7.82:392,8,0	1/1:9,0:12:6.02:223,6,0
chr10	93324602	.	CAG	C	9504.82	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.027;DP=794;FS=2.013;HRun=0;HaplotypeScore=102.6466;InbreedingCoeff=0.9993;MQ=80.37;MQ0=0;MQRankSum=-2.153;QD=39.11;ReadPosRankSum=3.611;VQSLOD=6.8486;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,154,2802	0/0:12,0:12:36.11:0,36,635	0/0:25,0:26:70.44:0,70,1216	0/0:29,0:28:75.18:0,75,1315	0/0:23,0:23:69.24:0,69,1283	1/1:0,23:23:66.22:969,66,0	1/1:1,36:37:99:1546,105,0	0/0:36,0:36:99:0,102,1878	0/0:22,0:22:66.21:0,66,1196	0/0:25,0:25:72.24:0,72,1320	0/0:19,0:19:54.19:0,54,1004	1/1:3,38:41:99:1603,111,0	1/1:0,26:26:69.23:1016,69,0	1/1:0,31:31:84.24:1236,84,0	0/0:40,0:40:99:0,114,2092	0/0:32,1:33:55.16:0,55,1715	0/0:41,0:41:99:0,120,2196	0/0:30,0:30:87.30:0,87,1621	0/0:17,0:17:51.17:0,51,955	0/0:16,0:16:39.13:0,39,730	0/0:65,0:65:99:0,190,3530	1/1:1,18:19:48.16:707,48,0	1/1:0,8:8:21.07:309,21,0	1/1:1,32:33:87.29:1281,87,0	1/1:1,24:25:57.19:839,57,0	0/0:28,0:27:84.27:0,84,1513	0/0:24,0:23:59.38:0,59,1155	0/0:11,0:11:33.10:0,33,575
chr10	93325036	.	T	TATTC	17200.33	PASS	AB=0.588;AC=45;AF=0.804;AN=56;BaseQRankSum=-3.458;DP=657;FS=5.539;HRun=0;HaplotypeScore=116.6637;InbreedingCoeff=0.8072;MQ=63.57;MQ0=1;MQRankSum=-3.943;QD=31.50;ReadPosRankSum=-0.228;VQSLOD=4.3615;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:41:84.22:0,84,1280	0/0:15,0:16:36.10:0,36,529	0/0:20,0:16:18.06:0,18,264	0/0:13,0:11:9.03:0,9,125	1/1:3,17:21:48.16:1141,48,0	1/1:15,1:27:17.17:607,17,0	1/1:15,1:18:15.05:226,15,0	1/1:28,8:38:8.17:694,8,0	1/1:9,19:28:48.16:1141,48,0	1/1:9,18:27:11.90:1270,12,0	1/1:4,14:18:42.06:938,42,0	1/1:12,0:23:30.10:492,30,0	1/1:12,0:22:36.12:578,36,0	1/1:6,0:17:27.09:455,27,0	0/0:21,0:20:48.16:0,48,773	1/1:2,12:14:27.09:651,27,0	1/1:11,0:17:14.97:237,15,0	1/1:6,14:20:33.11:790,33,0	1/1:14,5:20:21.05:449,21,0	1/1:15,22:37:63.16:1460,63,0	1/1:8,13:21:39.13:940,39,0	1/1:8,0:23:36.11:539,36,0	1/1:10,1:22:36.59:627,37,0	1/1:14,0:20:15.04:218,15,0	1/1:18,1:29:45.06:696,45,0	1/1:13,18:31:60.18:1365,60,0	1/1:19,14:32:2.71:998,3,0	0/1:6,14:20:15.18:690,0,15
chr10	93325378	.	G	GT	7698.56	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-9.413;DP=672;FS=11.688;HRun=9;HaplotypeScore=67.0562;InbreedingCoeff=0.9986;MQ=71.02;MQ0=2;MQRankSum=-1.973;QD=22.31;ReadPosRankSum=-0.675;VQSLOD=4.6672;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:87.13:0,87,969	0/0:11,0:11:23.99:0,24,208	0/0:25,0:22:46.94:0,47,385	0/0:20,0:17:41.40:0,41,345	1/1:1,20:22:30.90:539,31,0	0/0:16,0:16:38.98:0,39,339	0/0:27,1:28:47.73:0,48,627	1/1:11,21:33:64.75:621,65,0	1/1:0,16:16:39.11:431,39,0	1/1:5,25:30:75.19:818,75,0	1/1:2,20:24:56.78:576,57,0	0/0:26,0:27:43.23:0,43,524	0/0:16,0:16:44.97:0,45,386	0/0:29,0:29:83.94:0,84,722	0/0:25,0:25:71.99:0,72,624	1/1:1,19:20:31.10:571,31,0	1/1:3,0:28:45.45:227,45,0	1/1:2,15:17:39.11:431,39,0	1/1:7,9:16:30.08:331,30,0	1/1:4,25:30:45.79:652,46,0	1/1:9,23:32:78.15:831,78,0	0/0:24,0:24:62.96:0,63,542	0/0:25,0:25:50.94:0,51,442	0/0:19,0:19:41.98:0,42,364	0/0:17,0:17:38.95:0,39,335	1/1:5,28:33:54.99:828,55,0	1/1:4,19:23:42.11:465,42,0	1/1:5,15:19:19.29:378,19,0
chr10	93326011	.	ATG	A	1449.26	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.754;DP=709;FS=2.189;HRun=0;HaplotypeScore=89.7593;InbreedingCoeff=0.9993;MQ=78.62;MQ0=0;MQRankSum=-1.496;QD=40.26;ReadPosRankSum=1.129;VQSLOD=5.6814;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,2686	0/0:15,0:15:42.14:0,42,778	0/0:16,0:16:45.15:0,45,797	0/0:17,0:17:33:0,33,524	0/0:18,0:18:54.19:0,54,1004	0/0:22,0:22:60.21:0,60,1114	0/0:38,0:38:99:0,111,2052	0/0:35,0:35:99:0,99,1779	0/0:16,0:16:45.15:0,45,834	0/0:18,0:18:51.14:0,51,872	0/0:17,0:17:51.16:0,51,911	0/0:32,0:32:96.33:0,96,1798	0/0:23,0:23:69.22:0,69,1253	0/0:31,0:31:93.32:0,93,1727	0/0:26,0:26:75.26:0,75,1404	0/0:20,0:20:60.19:0,60,1093	1/1:1,35:36:99:1544,105,0	0/0:30,0:30:84.24:0,84,1536	0/0:12,0:12:33.11:0,33,618	0/0:15,0:15:39.13:0,39,730	0/0:56,0:56:99:0,157,2867	0/0:28,0:28:72.25:0,72,1331	0/0:22,0:22:60.21:0,60,1117	0/0:18,0:18:54.17:0,54,979	0/0:26,0:26:72.25:0,72,1348	0/0:36,0:36:96.32:0,96,1754	0/0:20,0:20:60.19:0,60,1091	0/0:16,0:16:45.13:0,45,809
chr10	93326829	.	G	GGT	6286.33	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-0.632;DP=640;FS=23.220;HRun=0;HaplotypeScore=127.4504;InbreedingCoeff=0.4901;MQ=60.16;MQ0=32;MQRankSum=-2.393;QD=14.13;ReadPosRankSum=-1.179;VQSLOD=2.8861;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:35:31.94:258,32,0	1/1:5,0:5:1.25:3,1,0	0/0:44,0:15:27.61:0,28,369	0/0:60,0:22:42.15:0,42,605	1/1:16,6:20:6.02:96,6,0	0/0:16,0:13:9.37:0,9,288	0/0:34,0:32:27.56:0,28,501	1/1:22,1:22:55.45:759,55,0	1/1:15,0:15:3.01:40,3,0	1/1:20,5:25:63.86:835,64,0	1/1:9,2:10:15.05:221,15,0	0/0:19,0:17:19.35:0,19,271	0/1:10,0:9:27.11:27,0,129	0/0:22,0:22:17.06:0,17,303	1/1:22,0:22:2.49:7,2,0	1/1:16,0:16:2.98:35,3,0	1/1:22,0:22:1.07:118,1,0	1/1:30,6:34:75.23:1014,75,0	1/1:9,9:16:30.09:437,30,0	1/1:11,2:13:21.04:310,21,0	1/1:34,5:39:60.63:894,61,0	0/1:21,0:19:54.54:55,0,61	0/1:12,0:12:6.11:6,0,158	0/1:20,0:20:1.84:2,0,177	0/1:20,0:20:23.59:24,0,233	1/1:23,6:27:44.67:577,45,0	1/1:9,5:14:15.18:378,15,0	1/1:9,1:10:17.70:191,18,0
chr10	93326838	.	G	GTGTGTGTGTGTGT	5489.86	PASS	AB=0.785;AC=38;AF=0.679;AN=56;BaseQRankSum=5.648;DP=671;FS=30.590;HRun=0;HaplotypeScore=203.6766;InbreedingCoeff=-0.2037;MQ=55.06;MQ0=40;MQRankSum=-1.819;QD=9.79;ReadPosRankSum=1.614;VQSLOD=2.6066;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:34:38.75:478,39,0	1/1:2,0:4:3.01:38,3,0	0/0:45,0:13:32.30:0,32,404	0/0:65,0:22:55.41:0,55,698	1/1:12,0:22:4.55:16,5,0	0/1:12,0:12:99:125,0,285	0/1:24,0:36:99:117,0,507	1/1:20,0:22:14.43:525,14,0	1/1:0,0:18:2.65:174,3,0	1/1:21,0:25:38.92:670,39,0	1/1:7,0:10:13.47:89,13,0	0/1:12,0:16:58.36:58,0,247	0/1:6,0:9:99:145,0,117	0/1:17,0:24:74.47:74,0,285	1/1:3,0:24:6.48:77,6,0	1/1:0,0:20:2.90:35,3,0	0/1:17,0:21:99:325,0,144	1/1:22,0:34:32.44:480,32,0	0/1:16,0:13:58.82:59,0,70	1/1:11,0:16:17.24:118,17,0	0/1:34,0:38:2.82:327,0,3	0/1:14,0:19:64.76:243,0,65	0/1:8,0:15:78.14:78,0,159	0/1:11,1:24:74.07:74,0,183	0/1:15,0:21:99:222,0,238	1/1:13,0:27:50.38:654,50,0	0/1:14,0:15:19.62:103,0,20	0/1:5,0:7:26.21:186,0,26
chr10	93326843	.	GT	G	223.94	PASS	AB=0.936;AC=5;AF=0.089;AN=56;BaseQRankSum=3.636;DP=674;FS=4.693;HRun=1;HaplotypeScore=132.4554;InbreedingCoeff=0.4442;MQ=50.43;MQ0=43;MQRankSum=-0.331;QD=2.73;ReadPosRankSum=-0.350;VQSLOD=-0.3810;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,9:37:93.70:190,0,94	0/1:5,0:4:0:0,0,0	0/0:47,0:12:35.60:0,36,439	0/0:67,0:19:22.57:0,23,521	0/0:25,0:23:4.78:0,5,43	0/0:17,0:14:27.08:0,27,354	0/0:36,0:34:46.84:0,47,598	0/0:25,0:23:36.63:0,37,493	0/0:15,0:15:6.02:0,6,74	0/0:26,0:25:55.46:0,55,780	0/0:10,0:9:9.23:0,9,85	0/0:21,0:19:22.78:0,23,322	0/0:11,0:10:15.05:0,15,213	0/0:26,0:24:26.60:0,27,352	0/0:23,0:22:6.02:0,6,78	0/1:15,0:15:0.01:0,0,0	1/1:24,0:24:6.79:129,7,0	0/0:35,0:33:51.20:0,51,468	0/0:16,0:12:36.01:0,36,469	0/0:19,0:18:16.47:0,16,171	0/0:39,0:37:36.63:0,37,412	0/0:21,0:18:9.03:0,9,130	0/0:15,0:15:17.94:0,18,248	0/0:27,0:25:11.87:0,12,159	0/0:19,0:19:20.87:0,21,300	0/0:32,0:29:56.29:0,56,713	0/0:14,0:14:21:0,21,250	0/0:6,0:6:18.06:0,18,245
chr10	93326844	.	TG	T	342.25	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=2.939;DP=668;FS=3.044;HRun=1;HaplotypeScore=130.7135;InbreedingCoeff=0.5117;MQ=50.44;MQ0=43;MQRankSum=-1.976;QD=5.27;ReadPosRankSum=1.640;VQSLOD=0.7381;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:37:36.63:37,0,141	0/1:5,0:4:0:0,0,0	0/0:47,0:11:32.89:0,33,405	0/0:67,0:19:27.17:0,27,505	0/0:23,0:22:6.79:0,7,66	0/0:18,0:15:30.02:0,30,359	0/0:36,0:34:47.38:0,47,614	0/0:25,0:23:56.89:0,57,686	0/0:15,0:15:6.02:0,6,74	0/0:26,0:25:69.72:0,70,899	0/0:10,0:9:12.02:0,12,141	0/0:21,0:19:23.12:0,23,324	0/0:10,0:9:15.05:0,15,213	0/0:25,0:23:26.73:0,27,343	0/0:23,0:22:6.02:0,6,78	0/0:14,0:14:0:0,0,0	1/1:14,7:22:40.87:410,41,0	0/0:36,0:34:69.08:0,69,789	0/0:16,0:12:36.12:0,36,518	0/0:19,0:18:25.28:0,25,267	0/0:38,0:36:54.06:0,54,631	0/0:21,0:18:9.03:0,9,130	0/0:15,0:15:17.98:0,18,251	0/0:28,0:26:15.01:0,15,179	0/0:19,0:19:20.87:0,21,301	0/0:31,0:28:64.25:0,64,827	0/0:13,0:13:23.93:0,24,309	0/0:6,0:6:18.06:0,18,247
chr10	93326845	.	G	GT	235.55	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=4.257;DP=668;FS=0.000;HRun=1;HaplotypeScore=132.6507;InbreedingCoeff=0.6184;MQ=50.35;MQ0=44;MQRankSum=-2.023;QD=8.41;ReadPosRankSum=-0.216;VQSLOD=0.6562;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:8.62:0,9,133	0/1:5,0:4:0:0,0,0	0/0:48,0:11:18.08:0,18,316	0/0:66,0:19:34.74:0,35,498	0/0:24,0:22:5.55:0,6,75	0/0:17,0:14:25.56:0,26,277	0/0:37,0:35:46.15:0,46,549	0/0:23,0:21:54.16:0,54,657	0/0:15,0:15:5.53:0,6,48	0/0:27,0:26:69.13:0,69,794	0/0:10,0:9:12.04:0,12,149	0/0:21,0:19:23.62:0,24,259	0/0:11,0:10:14.98:0,15,147	0/0:24,0:22:23.20:0,23,283	0/0:22,0:21:6.02:0,6,76	0/0:14,0:14:0:0,0,0	1/1:17,6:23:39.29:329,39,0	0/0:35,0:33:68.01:0,68,804	0/0:16,0:12:36.09:0,36,432	0/0:19,0:18:24.06:0,24,281	0/0:37,0:35:53.94:0,54,598	0/0:21,0:18:8.87:0,9,88	0/0:15,0:15:17.92:0,18,196	0/0:29,0:27:14.98:0,15,156	0/0:19,0:19:20.47:0,20,210	0/0:31,0:28:50.17:0,50,632	0/0:13,0:13:23.81:0,24,261	0/0:6,0:6:15:0,15,180
chr10	93327978	.	G	GT	2661.45	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=-7.028;DP=621;FS=7.648;HRun=8;HaplotypeScore=105.2514;InbreedingCoeff=0.4873;MQ=78.09;MQ0=0;MQRankSum=-0.925;QD=9.78;ReadPosRankSum=-1.052;VQSLOD=1.7420;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,43:49:70.59:794,71,0	1/1:3,8:11:13.04:182,13,0	0/0:30,0:28:42.82:0,43,428	0/1:16,0:14:8.23:8,0,82	0/0:18,0:18:49.58:0,50,291	0/0:12,0:12:26.83:0,27,214	0/0:28,0:28:72.87:0,73,649	0/0:24,0:24:43.93:0,44,279	0/0:28,0:28:66.86:0,67,379	0/0:30,0:30:84.28:0,84,498	0/0:17,0:17:43.17:0,43,237	0/1:25,0:25:9.96:98,0,10	0/1:20,0:20:10.11:80,0,10	1/1:15,1:16:6.67:122,7,0	1/1:2,15:20:42.84:459,43,0	0/0:21,0:21:52.33:0,52,297	1/1:2,26:27:72.21:830,72,0	0/0:27,0:27:64.09:0,64,370	0/0:20,0:21:54.29:0,54,305	0/0:19,0:19:37.58:0,38,233	0/0:23,0:23:34.07:0,34,321	1/1:21,0:21:0.69:104,1,0	0/1:16,0:16:15.64:58,0,16	0/1:34,0:34:16.37:72,0,16	0/1:16,0:16:6.85:40,0,7	0/0:27,0:27:70.18:0,70,433	0/0:17,0:17:40.70:0,41,230	0/0:0,0:7:14.26:0,14,42
chr10	93327986	.	TG	T	5984.91	PASS	AB=0.951;AC=37;AF=0.661;AN=56;BaseQRankSum=-7.351;DP=623;FS=10.882;HRun=9;HaplotypeScore=93.7824;InbreedingCoeff=0.3034;MQ=78.69;MQ0=0;MQRankSum=-1.170;QD=11.64;ReadPosRankSum=-0.518;VQSLOD=3.0367;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:43,0:43:50.16:240,50,0	0/1:11,0:11:3.46:86,0,3	0/0:31,0:30:40.49:0,40,474	0/1:17,0:16:18.40:18,0,102	1/1:3,17:20:47.90:420,48,0	0/1:12,1:13:3.40:3,0,184	0/0:30,1:31:79.79:0,80,914	1/1:6,18:24:45.57:410,46,0	1/1:4,21:25:63.03:575,63,0	1/1:6,28:34:83.96:745,84,0	1/1:4,12:16:39.01:356,39,0	0/1:28,0:28:6.46:6,0,133	0/1:20,0:20:4.16:4,0,97	0/1:20,0:20:27.97:118,0,28	1/1:21,0:21:41.03:208,41,0	1/1:1,19:20:51.02:466,51,0	0/0:28,0:27:80.60:0,81,619	1/1:3,21:24:57.03:521,57,0	1/1:3,16:19:50.86:452,51,0	0/1:2,13:16:1.47:229,0,1	1/1:7,17:25:30.81:325,31,0	0/0:18,0:18:34.63:0,35,122	0/1:18,0:18:4.36:4,0,101	0/1:32,0:32:7.82:8,0,167	0/1:16,0:16:12.13:12,0,71	1/1:9,15:24:45.01:411,45,0	1/1:1,18:19:39.02:356,39,0	0/1:8,0:8:9.17:11,0,9
chr10	93328085	.	C	CT	1163.89	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.007;DP=645;FS=0.000;HRun=1;HaplotypeScore=66.3333;InbreedingCoeff=0.9933;MQ=91.55;MQ0=0;MQRankSum=-2.429;QD=41.57;ReadPosRankSum=2.177;VQSLOD=4.1705;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,1869	0/0:8,0:8:24.08:0,24,312	0/0:30,0:30:79.65:0,80,1023	0/0:24,0:24:66.19:0,66,833	0/0:24,0:24:72.23:0,72,934	0/0:13,0:13:39.13:0,39,506	0/0:25,0:25:72.23:0,72,934	0/0:31,0:31:84.25:0,84,1063	0/0:22,0:22:66.18:0,66,839	0/0:28,0:28:84.27:0,84,1080	0/0:11,0:11:30.10:0,30,389	0/0:18,0:18:54.18:0,54,701	0/0:18,0:18:54.18:0,54,701	0/0:20,0:20:51.15:0,51,647	0/0:29,0:29:87.27:0,87,1115	0/0:19,0:19:54.15:0,54,686	1/1:1,27:28:84.28:1259,84,0	0/0:20,0:20:60.19:0,60,778	0/0:23,0:23:69.22:0,69,883	0/0:15,0:15:42.14:0,42,545	0/0:42,0:42:99:0,126,1636	0/0:20,0:20:60.19:0,60,777	0/0:19,0:19:57.19:0,57,739	0/0:27,0:27:81.26:0,81,1052	0/0:13,0:13:39.13:0,39,506	0/0:33,0:33:99:0,99,1274	0/0:30,0:30:87.27:0,87,1114	0/0:7,0:7:21.07:0,21,273
chr10	93329093	.	G	GCACACACACA	14399.71	PASS	AB=0.952;AC=29;AF=0.518;AN=56;BaseQRankSum=3.495;DP=750;FS=0.356;HRun=0;HaplotypeScore=271.4774;InbreedingCoeff=0.7801;MQ=52.73;MQ0=9;MQRankSum=-10.356;QD=34.87;ReadPosRankSum=-1.530;VQSLOD=3.8469;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:71.11:71,0,248	0/0:16,0:16:24.15:0,24,405	0/0:35,0:11:8.17:0,8,134	0/1:35,0:20:58.20:58,0,194	1/1:25,2:27:22.73:411,23,0	0/0:21,0:21:51.17:0,51,1415	0/0:35,0:37:90.27:0,90,2223	1/1:32,0:29:42.07:699,42,0	1/1:21,11:32:51.17:2139,51,0	1/1:23,2:24:29.31:1528,29,0	1/1:21,3:24:36.09:754,36,0	0/0:28,0:29:30.27:0,30,1857	0/0:35,0:36:90.28:0,90,2314	0/0:31,0:33:83.82:0,84,2085	0/0:13,0:14:14.80:0,15,283	1/1:28,9:40:60.12:1931,60,0	1/1:19,0:19:17.41:286,17,0	0/1:10,1:12:4.93:670,0,5	1/1:17,0:17:23.98:686,24,0	1/1:10,4:14:15.05:552,15,0	1/1:28,1:27:17.91:289,18,0	0/0:29,0:31:80.87:0,81,2203	0/0:23,0:24:51.19:0,51,1569	0/0:35,0:36:25.75:0,26,2009	0/0:23,0:23:63.20:0,63,1650	1/1:32,5:35:84.05:2469,84,0	1/1:21,5:26:60.18:1788,60,0	1/1:6,0:8:11.34:69,11,0
chr10	93329106	.	CACACACACAA	C	3137.03	PASS	AB=0.901;AC=7;AF=0.125;AN=56;BaseQRankSum=5.754;DP=852;FS=16.303;HRun=0;HaplotypeScore=330.0502;InbreedingCoeff=0.4892;MQ=49.00;MQ0=16;MQRankSum=-6.932;QD=26.14;ReadPosRankSum=2.541;VQSLOD=1.3636;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,17:39:61.78:1483,0,62	1/1:1,14:15:27.09:848,27,0	0/0:46,0:11:30.06:0,30,548	0/0:45,0:23:27.99:0,28,1223	0/0:31,0:30:74.91:0,75,957	0/0:23,0:23:66.22:0,66,2961	0/0:40,0:39:99:0,114,4844	0/0:43,0:38:99:0,105,2622	0/0:33,0:33:78.06:0,78,1390	0/1:34,0:33:12.06:12,0,1547	0/0:25,0:25:61.95:0,62,673	0/0:32,0:32:90.89:0,91,3698	0/0:38,0:37:99:0,105,4494	0/0:37,0:37:96.33:0,96,4108	1/1:9,7:16:36.11:921,36,0	0/0:39,0:39:65.03:0,65,1347	0/0:20,0:20:17.50:0,17,327	0/0:17,0:17:37.76:0,38,719	0/1:15,0:14:13.93:14,0,691	0/0:22,0:22:57.45:0,57,779	0/0:35,0:33:35.34:0,35,579	0/0:34,0:34:99:0,102,4501	0/0:27,0:27:75.19:0,75,3064	0/0:38,0:38:99:0,103,4205	0/0:25,0:25:75.25:0,75,3319	0/0:38,0:36:61.51:0,62,1808	0/0:26,0:26:4.10:0,4,1186	0/0:18,0:17:36:0,36,911
chr10	93329136	.	TAC	T	11227.95	PASS	AB=0.667;AC=25;AF=0.446;AN=56;BaseQRankSum=11.894;DP=902;FS=2.332;HRun=0;HaplotypeScore=213.3613;InbreedingCoeff=0.9101;MQ=49.69;MQ0=9;MQRankSum=-7.124;QD=29.09;ReadPosRankSum=-1.067;VQSLOD=5.1576;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:90.22:0,90,1522	0/0:18,0:18:36.12:0,36,602	0/0:43,0:21:42.98:0,43,787	0/0:47,0:23:57.96:0,58,828	1/1:4,27:30:71.95:903,72,0	0/0:26,0:25:66.21:0,66,1096	0/0:35,0:34:81.28:0,81,1367	1/1:23,18:36:81.20:1009,81,0	1/1:7,34:41:99:1398,108,0	1/1:8,28:35:59.45:991,59,0	1/1:2,12:14:32.98:371,33,0	0/0:38,0:38:90.31:0,90,1511	0/0:33,0:33:87.30:0,87,1461	0/0:38,0:38:90.31:0,90,1530	0/0:33,0:33:90.31:0,90,1525	1/1:5,38:43:99:1479,114,0	0/0:7,0:7:6.01:0,6,97	0/1:9,9:18:18.27:356,0,18	1/1:6,9:15:33.10:420,33,0	1/1:2,29:31:87.24:1112,87,0	1/1:14,38:51:12.08:1035,12,0	0/0:39,0:39:99:0,105,1750	0/0:36,0:36:99:0,108,1733	0/0:45,0:45:99:0,115,1874	0/0:31,0:31:81.26:0,81,1347	1/1:8,21:29:61.39:873,61,0	1/1:3,19:22:60.19:773,60,0	1/1:0,13:13:39.13:507,39,0
chr10	93329156	.	A	AAC	38.23	PASS	AB=0.625;AC=1;AF=0.018;AN=56;BaseQRankSum=6.434;DP=1011;FS=8.986;HRun=0;HaplotypeScore=276.3178;InbreedingCoeff=-0.0165;MQ=48.24;MQ0=21;MQRankSum=-5.186;QD=3.82;ReadPosRankSum=-3.797;VQSLOD=0.8289;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:83.66:0,84,1049	0/0:18,0:18:12.51:0,13,157	0/0:54,0:19:50.38:0,50,594	0/0:50,0:20:51.10:0,51,620	0/0:32,0:31:63:0,63,742	0/0:24,0:23:54.18:0,54,702	0/0:40,0:39:87.27:0,87,1114	0/0:41,0:32:63.20:0,63,808	0/0:43,0:43:78.64:0,79,1005	0/0:44,0:40:99:0,101,1217	0/0:18,0:16:27.05:0,27,331	0/0:36,0:36:99:0,99,1248	0/0:35,0:35:93.28:0,93,1177	0/0:33,0:33:87.28:0,87,1127	0/0:38,0:37:84.24:0,84,1074	0/0:50,0:50:90.20:0,90,1119	0/1:4,6:10:26.71:113,0,27	0/0:17,0:17:12.09:0,12,447	0/0:26,0:20:25.77:0,26,536	0/0:35,0:34:68.02:0,68,1018	0/0:78,0:75:99:0,163,1824	0/0:37,0:37:99:0,105,1315	0/0:47,0:47:92.93:0,93,1462	0/0:44,0:44:71.89:0,72,1312	0/0:35,0:35:68.62:0,69,1197	0/0:35,0:34:63.50:0,64,899	0/0:27,0:27:40.52:0,41,524	0/0:16,0:16:45.10:0,45,560
chr10	93329220	.	TACAC	T	2293.89	PASS	AB=0.981;AC=17;AF=0.304;AN=56;BaseQRankSum=15.377;DP=1019;FS=5.521;HRun=0;HaplotypeScore=284.3237;InbreedingCoeff=0.0436;MQ=45.94;MQ0=36;MQRankSum=-11.755;QD=4.95;ReadPosRankSum=2.260;VQSLOD=1.4365;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:40:52.70:0,53,1248	0/0:12,0:12:21.03:0,21,371	0/0:19,1:3:2.98:0,3,40	0/0:36,0:1:3:0,3,27	1/1:13,0:15:11.82:89,12,0	0/0:27,0:26:60.19:0,60,1342	0/0:53,0:46:80.78:0,81,1229	0/1:44,0:28:21.92:22,0,340	0/1:39,0:39:45.63:296,0,46	0/1:44,0:35:99:186,0,237	1/1:22,0:18:18.07:138,18,0	0/0:57,0:57:99:0,144,3404	0/0:42,0:42:99:0,117,2724	0/0:49,0:49:99:0,129,2841	0/0:56,0:55:99:0,126,2815	1/1:43,0:41:21.65:545,22,0	0/1:28,0:27:19.64:20,0,489	0/1:17,3:20:26.03:257,0,26	0/1:33,0:21:67.97:139,0,68	0/1:33,0:26:51.73:178,0,52	0/1:72,2:69:68.27:230,0,68	0/0:39,0:36:96.24:0,96,2191	0/0:40,0:40:99:0,102,2443	0/0:45,0:44:99:0,108,2590	0/0:40,0:40:99:0,111,2420	0/1:29,1:25:36.18:250,0,36	0/1:27,0:26:10.62:76,0,11	0/1:6,0:6:11.16:43,0,11
chr10	93329222	.	CACACACAT	C	12606.03	PASS	AB=0.943;AC=26;AF=0.464;AN=56;BaseQRankSum=6.395;DP=1027;FS=1.362;HRun=0;HaplotypeScore=302.4276;InbreedingCoeff=0.6682;MQ=46.11;MQ0=37;MQRankSum=-9.494;QD=24.38;ReadPosRankSum=-6.410;VQSLOD=2.4992;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:36.92:0,37,1822	0/0:12,0:12:15.05:0,15,425	0/0:21,0:4:5.95:0,6,55	0/0:37,0:2:5.75:0,6,49	1/1:11,4:15:15.05:360,15,0	0/0:33,0:32:33.16:0,33,1559	0/1:49,0:42:99:191,0,735	0/1:45,3:30:99:615,0,156	1/1:23,16:39:75.22:1681,75,0	0/1:35,9:35:87.92:1233,0,88	1/1:5,16:17:20.93:526,21,0	0/0:59,0:59:99:0,144,5198	0/0:43,0:43:99:0,123,4227	0/0:48,0:48:99:0,118,4348	0/0:56,0:55:99:0,111,4240	1/1:20,22:40:99:2399,102,0	0/1:28,0:27:81.29:81,0,133	1/1:16,3:19:28.39:723,28,0	1/1:28,6:21:29.20:870,29,0	1/1:20,14:27:48.13:1010,48,0	1/1:73,6:71:36.96:1204,37,0	0/0:39,0:36:96.22:0,96,3142	0/0:40,0:40:99:0,102,3389	0/0:43,0:42:99:0,102,3956	0/0:39,0:39:99:0,99,3306	1/1:24,9:27:34.39:1139,34,0	1/1:3,24:26:15.05:351,15,0	1/1:4,1:5:9.03:223,9,0
chr10	93329228	.	CAT	C	4464	PASS	AB=0.953;AC=26;AF=0.464;AN=56;BaseQRankSum=14.407;DP=1008;FS=0.000;HRun=0;HaplotypeScore=254.0675;InbreedingCoeff=0.5546;MQ=45.92;MQ0=39;MQRankSum=-9.287;QD=8.04;ReadPosRankSum=-6.610;VQSLOD=2.6694;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:38,1:39:33:0,33,871	0/0:10,0:10:15.04:0,15,240	0/0:22,0:5:10.25:0,10,120	0/1:45,0:3:11.80:12,0,31	1/1:13,2:15:14.33:88,14,0	0/0:32,0:31:60.07:0,60,604	0/1:47,0:40:28.11:28,0,526	0/1:42,3:28:47.35:311,0,47	1/1:37,3:40:70.32:517,70,0	0/1:39,2:33:50.17:463,0,50	1/1:19,0:16:20.41:117,20,0	0/0:53,0:53:99:0,147,2714	0/0:44,0:44:99:0,126,2192	0/0:45,0:45:99:0,121,2187	0/0:46,0:45:99:0,111,1971	1/1:43,1:42:99:743,100,0	0/1:24,5:28:99:163,0,219	1/1:19,1:20:35.07:270,35,0	0/1:35,1:23:13.27:266,0,13	1/1:31,1:25:39.75:264,40,0	1/1:73,1:67:64.48:562,64,0	0/0:40,0:37:99:0,108,1762	0/0:43,0:43:99:0,111,1794	0/0:44,0:43:99:0,111,1962	0/0:35,0:35:99:0,105,1749	1/1:36,1:31:44.77:489,45,0	1/1:25,0:24:14.51:81,15,0	1/1:5,1:6:8.92:92,9,0
chr10	93329230	.	T	TAC	5764.34	PASS	AB=0.981;AC=21;AF=0.375;AN=56;BaseQRankSum=-1.545;DP=1014;FS=16.890;HRun=0;HaplotypeScore=253.3323;InbreedingCoeff=0.1967;MQ=45.95;MQ0=40;MQRankSum=-1.562;QD=10.69;ReadPosRankSum=-9.388;VQSLOD=1.8461;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:13.36:0,13,549	0/0:9,0:9:12.02:0,12,154	0/0:24,0:6:15.02:0,15,163	0/0:47,0:4:7.57:0,8,54	0/1:14,1:15:0.61:125,0,1	1/1:4,28:31:15.19:828,15,0	1/1:31,16:40:78.09:1205,78,0	1/1:41,2:28:10.43:559,10,0	0/1:40,1:41:31.99:384,0,32	0/1:40,0:32:69.30:232,0,69	0/1:19,0:16:22:48,0,22	0/0:55,0:55:99:0,144,1825	0/0:45,0:45:99:0,120,1510	0/0:45,0:45:99:0,111,1442	0/0:45,0:44:99:0,99,1302	0/1:44,2:44:99:216,0,99	1/1:11,18:28:19.11:428,19,0	0/1:20,0:20:26.39:208,0,26	0/1:33,2:23:26.56:310,0,27	0/1:29,1:23:29.47:216,0,29	1/1:65,7:65:26:605,26,0	0/0:41,0:38:93.18:0,93,1169	0/0:42,0:42:89.92:0,90,1137	0/0:47,0:46:99:0,108,1341	0/0:35,0:35:87.28:0,87,1123	0/1:37,0:31:19.21:370,0,19	0/1:26,0:25:18.44:24,0,18	0/1:5,0:5:8.14:8,0,8
chr10	93329274	.	CCACATACA	C	2195.20	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.765;DP=1080;FS=4.490;HRun=0;HaplotypeScore=325.8974;InbreedingCoeff=0.8826;MQ=50.41;MQ0=6;MQRankSum=-3.541;QD=29.27;ReadPosRankSum=-4.505;VQSLOD=2.1050;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:14,9:23:24.04:427,24,0	1/1:0,7:7:8.42:208,8,0	0/0:57,0:16:1.50:0,2,445	0/0:57,0:20:41.67:0,42,804	0/0:19,0:19:36.58:0,37,1295	0/0:29,0:29:48.12:0,48,1539	0/0:43,0:44:99:0,120,3789	0/0:62,0:60:99:0,114,3132	0/0:57,0:57:99:0,114,4055	0/0:33,0:33:84.19:0,84,3018	0/0:16,0:15:11.74:0,12,498	0/0:60,0:59:99:0,147,5243	0/0:47,0:47:99:0,120,4288	0/0:46,0:46:99:0,112,3966	1/1:25,20:45:90.20:1696,90,0	0/0:55,0:55:99:0,123,4182	0/0:26,0:26:42.14:0,42,1089	0/0:14,0:14:33.11:0,33,1296	0/0:31,0:31:60.21:0,60,2191	0/0:31,0:28:54.13:0,54,1897	0/0:83,0:83:99:0,160,5773	0/0:44,0:44:99:0,117,4603	0/0:30,0:30:57.10:0,57,1825	0/0:58,0:58:99:0,132,4333	0/0:27,0:27:60.13:0,60,1846	0/0:42,0:42:99:0,111,4266	0/0:31,0:31:48.16:0,48,1929	0/0:5,0:5:12.04:0,12,366
chr10	93329355	.	AAC	A	2885.92	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=0.740;DP=1309;FS=6.143;HRun=0;HaplotypeScore=317.8543;InbreedingCoeff=0.9424;MQ=47.29;MQ0=49;MQRankSum=6.005;QD=26.24;ReadPosRankSum=1.950;VQSLOD=3.2086;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,30:42:91.09:1133,91,0	1/1:5,8:12:27.08:337,27,0	0/0:30,0:5:8.79:0,9,86	0/0:28,0:6:6.10:0,6,209	0/0:34,0:33:52.19:0,52,866	0/0:34,0:34:93.26:0,93,1489	0/0:39,0:37:84.27:0,84,1372	0/0:71,0:47:96.24:0,96,1539	0/0:57,0:55:84.27:0,84,1370	0/0:69,0:59:99:0,146,2237	0/0:25,0:24:50.37:0,50,782	0/0:64,0:62:99:0,141,2340	0/0:54,0:54:99:0,135,2201	0/0:51,0:48:99:0,114,1864	1/1:15,39:53:99:1558,120,0	0/0:77,0:72:99:0,111,1821	0/0:16,0:16:21.53:0,22,277	0/0:37,0:32:87.18:0,87,1341	0/0:34,0:17:48.16:0,48,797	0/0:37,0:35:45.14:0,45,720	0/0:133,0:124:99:0,234,3623	0/0:39,0:39:78.16:0,78,1237	0/0:34,0:34:72.22:0,72,1128	0/0:77,0:72:99:0,162,2583	0/0:31,0:31:37.22:0,37,615	0/0:74,0:71:99:0,186,2890	0/0:34,0:34:72.01:0,72,1119	0/0:19,0:18:54.18:0,54,882
chr10	93329365	.	C	CAT	302.92	PASS	AB=0.916;AC=3;AF=0.054;AN=56;BaseQRankSum=3.582;DP=1311;FS=4.549;HRun=0;HaplotypeScore=341.0618;InbreedingCoeff=0.5912;MQ=47.06;MQ0=67;MQRankSum=-3.870;QD=3.48;ReadPosRankSum=-0.777;VQSLOD=1.3140;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:95.09:0,95,661	0/0:10,0:9:26.66:0,27,183	0/0:26,0:4:8.99:0,9,102	0/0:25,0:6:11.67:0,12,208	0/0:31,1:31:57.14:0,57,751	0/0:36,0:36:99:0,99,1261	0/0:36,0:35:96.17:0,96,1201	0/0:77,1:43:82.56:0,83,1121	0/0:52,0:50:87.15:0,87,1135	0/0:69,0:57:99:0,153,1821	0/0:25,0:25:50.33:0,50,618	0/0:63,0:61:99:0,147,1924	0/0:51,0:51:99:0,135,1771	0/0:50,0:47:99:0,117,1538	0/0:54,0:54:99:0,125,852	0/0:79,1:75:99:0,117,1564	1/1:8,2:11:14.44:268,14,0	0/0:36,3:34:74.93:0,75,1063	0/0:48,0:20:60:0,60,726	0/0:34,1:33:47.81:0,48,602	0/0:140,1:131:99:0,232,2935	0/0:35,0:35:81.15:0,81,1022	0/0:34,0:34:75.13:0,75,915	0/0:81,0:75:99:0,165,2082	0/0:27,0:28:47.76:0,48,562	0/1:69,7:69:99:136,0,2073	0/0:30,0:30:61.97:0,62,946	0/0:19,0:18:54.05:0,54,677
chr10	93329401	.	T	TAC	26635.72	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-9.512;DP=1233;FS=4.977;HRun=0;HaplotypeScore=277.9388;InbreedingCoeff=0.9701;MQ=46.28;MQ0=52;MQRankSum=4.185;QD=26.82;ReadPosRankSum=3.530;VQSLOD=4.7049;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:52:50.69:0,51,1134	0/0:8,0:7:12.04:0,12,154	0/0:67,0:25:61.26:0,61,702	0/0:38,0:10:13.57:0,14,183	1/1:12,15:26:22.61:361,23,0	1/1:13,18:31:69.18:1084,69,0	1/1:23,16:38:82.41:1344,82,0	1/1:36,40:52:96.28:1518,96,0	1/1:20,32:51:69.23:1142,69,0	1/1:29,24:46:93.28:1502,93,0	1/1:5,17:22:24.08:408,24,0	1/1:12,59:68:99:2289,135,0	1/1:6,40:47:81.28:1377,81,0	1/1:7,38:44:87.30:1469,87,0	0/0:65,0:65:93.29:0,93,1208	1/1:26,41:61:73.69:1602,74,0	0/0:4,0:3:8.96:0,9,92	1/1:10,20:28:68.72:1102,69,0	1/1:23,12:20:12.67:720,13,0	1/1:10,15:24:33.11:555,33,0	1/1:43,65:100:99:2491,152,0	1/1:23,20:43:69.17:1099,69,0	1/1:8,21:29:66.23:1116,66,0	1/1:25,45:66:99:2220,104,0	1/1:2,19:22:30.10:510,30,0	1/1:29,27:52:99:1563,101,0	1/1:10,15:25:50.76:774,51,0	1/1:5,9:13:24.55:392,25,0
chr10	93329454	.	CACAA	C	1386.38	PASS	AB=0.973;AC=19;AF=0.339;AN=56;BaseQRankSum=13.774;DP=984;FS=10.974;HRun=0;HaplotypeScore=406.2740;InbreedingCoeff=0.3762;MQ=45.78;MQ0=23;MQRankSum=-13.515;QD=4.14;ReadPosRankSum=-1.443;VQSLOD=0.0901;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,162,3493	0/0:21,0:21:60.12:0,60,1285	0/0:47,0:10:22.21:0,22,365	0/0:49,0:10:18.54:0,19,240	1/1:25,0:25:19.70:136,20,0	0/0:27,0:26:72.14:0,72,1729	0/0:43,0:42:99:0,113,2694	0/1:34,0:27:99:230,0,109	1/1:40,0:40:0.92:131,1,0	0/1:33,0:31:44.24:128,0,44	1/1:19,0:19:14.08:122,14,0	0/0:64,0:63:99:0,155,3586	0/0:49,0:49:99:0,120,2975	0/0:48,0:48:99:0,123,2692	0/0:61,0:61:99:0,168,3060	1/1:44,2:45:68.81:336,69,0	1/1:3,0:3:5.82:36,6,0	0/1:9,1:10:56.14:56,0,134	0/0:19,0:9:11.16:0,11,175	1/1:18,0:18:25.12:106,25,0	0/1:38,2:37:44.48:66,0,44	0/0:43,0:43:99:0,118,2509	0/0:26,0:26:72.16:0,72,1679	0/0:63,0:63:99:0,168,3683	0/0:30,0:30:78.25:0,78,1892	0/1:38,0:36:39.81:145,0,40	0/1:19,1:20:61.24:70,0,61	0/1:9,0:9:8.67:9,0,74
chr10	93329456	.	CAA	C	5144.87	PASS	AB=0.782;AC=21;AF=0.375;AN=56;BaseQRankSum=13.107;DP=966;FS=1.666;HRun=3;HaplotypeScore=361.2493;InbreedingCoeff=0.4152;MQ=46.42;MQ0=23;MQRankSum=-14.742;QD=15.36;ReadPosRankSum=-0.029;VQSLOD=1.6046;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,162,2623	0/0:20,0:20:60.02:0,60,1010	0/0:46,0:10:22.19:0,22,273	0/0:48,0:9:18.20:0,18,172	1/1:12,12:24:42.70:368,43,0	0/0:25,0:24:71.42:0,71,1235	0/0:42,0:41:99:0,114,2017	0/1:30,0:25:46.66:323,0,47	1/1:21,19:40:74.54:803,75,0	0/1:20,11:29:21.26:544,0,21	1/1:13,6:19:30.98:241,31,0	0/0:65,0:64:99:0,166,2702	0/0:52,0:51:99:0,126,2197	0/0:49,0:49:99:0,126,2024	0/0:63,0:63:99:0,174,2446	1/1:24,21:44:99:1074,106,0	1/1:3,0:3:5.82:36,6,0	0/1:4,5:9:75.49:214,0,75	0/1:15,2:8:24.75:25,0,118	1/1:7,11:18:38.79:438,39,0	0/1:27,5:30:42.88:109,0,43	0/0:43,0:43:99:0,121,1931	0/0:26,0:26:75.15:0,75,1274	0/0:62,0:62:99:0,168,2781	0/0:31,0:31:84.23:0,84,1455	1/1:27,10:35:2.24:583,2,0	0/1:12,8:20:26.96:309,0,27	0/1:4,3:7:50.28:79,0,50
chr10	93329465	.	ACACATATACGCG	A	12077.72	PASS	AB=0.957;AC=32;AF=0.593;AN=54;BaseQRankSum=10.420;DP=929;FS=3.999;HRun=0;HaplotypeScore=456.7546;InbreedingCoeff=0.1644;MQ=46.51;MQ0=24;MQRankSum=-10.672;QD=18.05;ReadPosRankSum=-5.099;VQSLOD=1.2323;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:57,0:57:46.43:46,0,3078	0/1:21,0:21:15.68:16,0,1193	0/0:41,0:10:20.98:0,21,359	0/0:41,0:7:2.56:0,3,149	1/1:13,11:24:48.22:1259,48,0	0/1:28,0:27:43.59:44,0,1239	0/1:41,0:40:99:160,0,1534	1/1:16,0:11:5.94:41,6,0	1/1:28,9:37:57.84:1266,58,0	1/1:21,9:28:42.23:1534,42,0	1/1:7,6:13:30:739,30,0	0/1:68,0:67:90.21:90,0,2586	0/1:54,0:53:23.78:24,0,2876	0/0:46,0:46:50.51:0,51,2438	0/0:64,0:64:2.50:0,2,2205	1/1:31,9:39:80.26:1692,80,0	./.	1/1:9,1:10:6.71:290,7,0	0/1:11,3:8:11.35:482,0,11	1/1:17,2:19:29.57:660,30,0	1/1:40,0:36:31.82:478,32,0	0/1:42,0:42:10.33:10,0,1992	0/0:31,0:31:69.37:0,69,1913	0/1:55,0:55:99:142,0,2880	0/0:35,0:35:66.10:0,66,2443	1/1:21,12:31:7.66:1545,8,0	1/1:12,9:21:14.58:1279,15,0	0/1:4,2:6:4.32:281,0,4
chr10	93329473	.	ACGCG	A	2549.77	PASS	AB=0.960;AC=29;AF=0.537;AN=54;BaseQRankSum=14.937;DP=858;FS=6.593;HRun=0;HaplotypeScore=374.5634;InbreedingCoeff=0.5857;MQ=47.44;MQ0=14;MQRankSum=-12.233;QD=5.40;ReadPosRankSum=-7.656;VQSLOD=-0.0889;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:57,1:57:21.41:0,21,1112	0/0:20,0:20:49.89:0,50,574	0/0:37,0:10:19.93:0,20,377	0/0:36,0:6:8.48:0,8,122	1/1:23,0:23:38.16:229,38,0	0/0:30,0:29:43.92:0,44,552	0/1:41,0:40:99:151,0,638	1/1:2,0:2:2.13:5,2,0	1/1:32,0:32:49.57:249,50,0	1/1:27,0:26:52.82:374,53,0	1/1:13,0:13:20.01:86,20,0	0/1:59,6:65:99:116,0,1008	0/1:50,4:53:3.73:4,0,993	0/0:39,1:40:49.15:0,49,984	0/0:61,0:61:24.06:0,24,1093	1/1:34,0:34:67.61:350,68,0	./.	1/1:9,0:9:18.99:100,19,0	0/1:10,0:8:36.90:102,0,37	1/1:15,0:15:28.20:156,28,0	1/1:35,0:33:18.41:135,18,0	0/0:37,0:37:59.47:0,59,767	0/0:28,1:29:52.63:0,53,694	0/1:56,3:59:53.14:53,0,1167	0/0:35,1:36:67.07:0,67,827	1/1:26,0:25:10.86:376,11,0	1/1:20,0:20:5:197,5,0	1/1:6,0:6:11.47:69,11,0
chr10	93329482	.	TAC	T	389	PASS	AB=0.914;AC=11;AF=0.196;AN=56;BaseQRankSum=10.289;DP=932;FS=0.000;HRun=0;HaplotypeScore=386.2546;InbreedingCoeff=-0.0891;MQ=46.25;MQ0=16;MQRankSum=-10.152;QD=1.54;ReadPosRankSum=-5.461;VQSLOD=-0.1260;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:57:99:0,130,2117	0/0:19,0:19:48.16:0,48,805	0/0:39,0:11:23.22:0,23,236	0/0:41,0:5:3.01:0,3,40	0/1:27,0:27:22.41:66,0,22	0/0:30,0:29:61.39:0,61,1014	0/0:44,0:43:99:0,100,1605	0/1:15,3:9:53.91:54,0,247	0/1:36,0:36:25.34:25,0,143	0/1:28,3:30:33.79:34,0,371	1/1:15,0:15:7.63:53,8,0	0/0:60,0:59:99:0,123,2039	0/0:54,0:53:99:0,111,1883	0/0:43,0:43:99:0,104,1700	0/0:55,0:55:99:0,110,1762	0/1:47,0:46:49.91:50,0,289	0/0:1,0:1:2.88:0,3,15	0/1:5,2:7:62.08:62,0,97	0/1:13,1:9:20.92:21,0,78	0/1:16,1:17:9.73:10,0,35	0/1:31,10:37:33.18:160,0,33	0/0:41,0:41:99:0,99,1599	0/0:33,0:33:90.45:0,90,1365	0/0:59,0:58:99:0,136,2235	0/0:39,0:38:99:0,103,1683	0/0:31,1:31:25.45:0,25,521	0/0:23,0:23:7.47:0,7,280	0/0:5,0:5:0.71:0,1,69
chr10	93329550	.	CAT	C	491.83	PASS	AB=0.875;AC=7;AF=0.130;AN=54;BaseQRankSum=9.969;DP=1111;FS=16.314;HRun=0;HaplotypeScore=340.2812;InbreedingCoeff=-0.1562;MQ=43.42;MQ0=50;MQRankSum=-9.225;QD=1.41;ReadPosRankSum=-2.882;VQSLOD=0.7700;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:31:42.15:0,42,913	0/0:10,0:10:1.29:0,1,252	./.	0/0:20,3:3:6.02:0,6,90	0/0:27,5:31:24.06:0,24,428	0/0:31,0:30:59.65:0,60,1120	0/0:50,0:49:99:0,100,1712	0/0:72,1:36:35.26:0,35,561	0/0:26,5:27:11.09:0,11,282	0/1:36,16:47:99:411,0,1158	0/0:11,4:13:15.04:0,15,247	0/0:51,0:50:96.76:0,97,2191	0/0:47,0:45:99:0,105,1889	0/0:50,0:49:99:0,99,1790	0/0:37,0:36:44.91:0,45,802	0/1:40,15:50:12.35:12,0,750	0/1:16,0:14:21.32:21,0,57	0/1:25,1:22:28.07:28,0,531	0/0:24,0:9:24.03:0,24,413	0/0:22,5:26:39.11:0,39,702	0/1:101,12:94:99:120,0,981	0/0:46,0:46:99:0,120,2147	0/0:38,0:37:99:0,102,1832	0/0:63,0:60:99:0,123,2250	0/0:45,0:44:99:0,118,2187	0/1:45,7:45:18.61:19,0,1474	0/1:26,7:32:1.41:1,0,885	0/0:11,1:12:12.22:0,12,556
chr10	93329568	.	T	TAC	11308.20	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-4.942;DP=1132;FS=10.770;HRun=0;HaplotypeScore=261.9660;InbreedingCoeff=0.8346;MQ=43.77;MQ0=66;MQRankSum=-2.155;QD=19.01;ReadPosRankSum=0.737;VQSLOD=3.4950;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,12:28:29.83:451,30,0	1/1:2,4:5:8.80:153,9,0	0/0:37,0:2:4.56:0,5,38	0/0:34,0:4:3:0,3,39	1/1:18,21:37:44.83:703,45,0	0/0:32,0:31:53.85:0,54,660	0/0:53,0:52:94.08:0,94,1285	0/0:59,1:17:5.72:0,6,24	1/1:20,21:37:35.47:522,35,0	1/1:25,31:48:80.32:1670,80,0	1/1:8,9:16:27.08:426,27,0	0/0:43,0:42:99:0,105,1332	0/0:43,0:42:84.12:0,84,1087	0/0:50,0:48:89.35:0,89,1167	1/1:12,19:28:26.67:459,27,0	1/1:30,30:55:2.66:917,3,0	0/1:14,0:14:30.04:76,0,30	1/1:9,15:21:23.76:643,24,0	1/1:20,9:14:27.09:431,27,0	1/1:8,20:27:45.15:764,45,0	1/1:61,57:98:57.60:1242,58,0	0/0:50,0:50:99:0,120,1496	0/0:35,0:35:90.19:0,90,1134	0/0:58,1:57:99:0,102,1304	0/0:40,0:40:99:0,105,1335	1/1:32,23:48:77.72:1387,78,0	1/1:4,25:27:57.19:956,57,0	1/1:1,12:13:30.10:510,30,0
chr10	93329573	.	ACACATG	A	108.67	PASS	AB=0.875;AC=2;AF=0.036;AN=56;BaseQRankSum=6.438;DP=1128;FS=4.580;HRun=0;HaplotypeScore=341.6883;InbreedingCoeff=-0.0493;MQ=43.82;MQ0=65;MQRankSum=-4.921;QD=2.53;ReadPosRankSum=-1.766;VQSLOD=1.4111;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:26:3.63:0,4,248	0/0:6,0:5:8.79:0,9,151	0/0:40,0:2:6.02:0,6,173	0/0:44,0:5:11.91:0,12,216	0/0:40,0:38:50.77:0,51,1138	0/0:29,0:28:57.08:0,57,1819	0/0:48,0:47:99:0,108,3487	0/0:55,0:19:5.39:0,5,469	0/0:42,0:38:28.24:0,28,874	0/0:54,0:47:43.05:0,43,1839	0/0:16,0:15:27.09:0,27,579	0/0:44,0:43:99:0,111,3586	0/0:42,0:41:96.80:0,97,2990	0/0:51,0:49:99:0,105,3072	0/1:28,0:26:3.85:4,0,222	0/0:58,0:56:83.72:0,84,1828	0/1:10,5:14:33.52:183,0,34	0/0:25,0:21:14.57:0,15,961	0/0:31,0:15:36.12:0,36,779	0/0:29,0:28:48.13:0,48,1233	0/0:122,0:101:38.56:0,39,2007	0/0:50,0:49:99:0,126,3964	0/0:35,0:35:93.30:0,93,2875	0/0:54,0:52:99:0,105,3374	0/0:37,0:37:99:0,108,3175	0/0:59,0:53:91.26:0,91,2032	0/0:29,0:27:56.53:0,57,1401	0/0:13,0:13:33.06:0,33,783
chr10	93329577	.	ATG	A	62.71	PASS	AB=0.876;AC=4;AF=0.071;AN=56;BaseQRankSum=8.278;DP=1084;FS=0.675;HRun=0;HaplotypeScore=268.3141;InbreedingCoeff=-0.0965;MQ=44.58;MQ0=55;MQRankSum=-5.111;QD=0.71;ReadPosRankSum=-4.277;VQSLOD=1.5626;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,3:20:14.13:14,0,88	0/0:6,0:5:8.61:0,9,72	0/0:44,0:2:6.02:0,6,94	0/0:46,0:5:12.01:0,12,175	0/0:36,2:36:50.93:0,51,626	0/0:29,0:28:57.12:0,57,1114	0/0:47,1:47:80.37:0,80,2137	0/0:45,1:20:7.93:0,8,506	0/0:39,0:35:7.04:0,7,520	0/0:49,1:44:1.34:0,1,831	0/0:15,0:15:27.07:0,27,304	0/0:46,0:45:99:0,120,2320	0/0:43,0:42:99:0,99,1892	0/0:49,0:48:99:0,107,2040	0/1:22,4:24:10.87:11,0,124	0/0:51,1:49:87.03:0,87,1079	0/1:10,5:14:31.87:128,0,32	0/1:23,0:19:12.18:12,0,431	0/0:31,0:15:42.12:0,42,511	0/0:23,3:25:48.10:0,48,526	0/0:116,0:102:42.34:0,42,950	0/0:48,0:47:99:0,126,2440	0/0:36,0:36:99:0,99,1873	0/0:59,0:57:99:0,114,2159	0/0:37,0:37:99:0,108,2017	0/0:44,0:43:53.15:0,53,1148	0/0:30,0:28:50.26:0,50,627	0/0:13,0:13:33.01:0,33,334
chr10	93329628	.	TAC	T	4460.04	PASS	AC=14;AF=0.280;AN=50;BaseQRankSum=-3.952;DP=960;FS=2.294;HRun=0;HaplotypeScore=261.3229;InbreedingCoeff=0.9615;MQ=40.48;MQ0=50;MQRankSum=5.807;QD=19.56;ReadPosRankSum=4.534;VQSLOD=4.7200;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:55,1:6:17.98:0,18,262	0/0:55,0:11:22.35:0,22,266	0/0:22,0:21:33.11:0,33,552	0/0:27,0:27:39.13:0,39,646	0/0:36,0:36:72.23:0,72,1164	0/0:121,0:76:99:0,119,1879	0/0:36,0:36:58.76:0,59,972	0/0:56,0:45:96.28:0,96,1509	0/0:18,0:17:18.06:0,18,301	1/1:20,24:41:72.21:894,72,0	1/1:17,22:37:58.58:681,59,0	1/1:9,19:27:60.05:744,60,0	0/0:3,0:1:0:0,0,0	0/0:36,0:33:72.24:0,72,1203	./.	0/0:13,0:12:24.05:0,24,367	0/0:36,0:24:42.10:0,42,625	0/0:28,0:28:27.09:0,27,451	0/0:111,0:96:94.82:0,95,1491	1/1:12,30:41:60.19:751,60,0	1/1:9,14:23:38.96:496,39,0	1/1:13,21:31:45.12:549,45,0	1/1:9,9:17:27.02:344,27,0	0/0:45,0:39:89.15:0,89,1358	0/0:14,0:13:21.04:0,21,321	0/0:8,0:8:18.06:0,18,299
chr10	93329668	.	A	AAC	1038.97	PASS	AB=0.980;AC=15;AF=0.313;AN=48;BaseQRankSum=-4.281;DP=589;FS=36.696;HRun=0;HaplotypeScore=297.8740;InbreedingCoeff=-0.2943;MQ=37.75;MQ0=16;MQRankSum=5.366;QD=3.40;ReadPosRankSum=3.127;VQSLOD=1.6636;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:59,0:13:33.08:0,33,417	0/0:69,0:25:67.07:0,67,838	0/0:12,0:12:1.71:0,2,4	0/1:21,1:22:59.17:59,0,67	0/1:23,0:23:99:223,0,238	0/0:14,0:13:18.06:0,18,222	0/1:19,0:19:7.90:8,0,31	0/1:34,0:33:99:175,0,311	0/0:14,0:14:11.39:0,11,65	0/1:24,0:23:78.47:226,0,78	0/1:33,0:33:99:182,0,440	0/1:26,1:27:41.10:41,0,378	./.	0/1:16,0:16:12.60:13,0,34	./.	0/1:6,0:7:29.08:29,0,62	0/0:9,0:8:10.66:0,11,145	0/0:25,0:25:21.06:0,21,114	0/0:48,0:45:25.90:0,26,218	0/1:33,2:35:41.87:42,0,158	0/0:23,0:22:12.02:0,12,229	1/1:23,0:23:8.97:73,9,0	0/1:14,0:13:78.88:79,0,110	0/1:24,0:23:18.18:18,0,285	0/1:5,0:5:16.11:16,0,31	0/0:8,0:8:2.39:0,2,99
chr10	93329674	.	CAT	C	1036.27	PASS	AB=0.841;AC=15;AF=0.313;AN=48;BaseQRankSum=-7.307;DP=574;FS=20.299;HRun=0;HaplotypeScore=300.5628;InbreedingCoeff=-0.2787;MQ=35.78;MQ0=18;MQRankSum=4.846;QD=4.34;ReadPosRankSum=0.312;VQSLOD=1.5049;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:63,0:15:42:0,42,605	0/0:72,0:26:65.07:0,65,1071	0/1:7,6:13:33.27:35,0,33	0/0:22,0:22:26.68:0,27,309	0/1:23,2:25:4.49:4,0,629	0/1:13,1:13:2.97:3,0,363	0/1:11,5:16:11.87:12,0,254	0/1:19,15:33:99:503,0,543	0/0:7,7:14:14.51:0,15,141	0/1:22,0:21:34.38:34,0,229	0/1:32,0:32:11.47:11,0,862	0/0:28,0:28:18.55:0,19,728	./.	0/1:11,4:15:99:132,0,161	./.	0/1:5,1:6:74.96:75,0,143	0/1:7,2:8:24.57:25,0,239	0/0:14,12:26:34.04:0,34,325	0/0:34,7:38:29.08:0,29,433	0/0:32,0:32:8.03:0,8,546	0/0:22,0:21:21.43:0,21,545	1/1:21,0:21:3.46:64,3,0	0/0:14,0:13:24.98:0,25,351	0/1:19,2:20:99:201,0,439	0/1:2,1:3:14.86:15,0,50	0/1:6,2:8:63.91:64,0,146
chr10	93329688	.	TGCA	T	351.44	PASS	AB=0.870;AC=7;AF=0.135;AN=52;BaseQRankSum=0.164;DP=527;FS=3.026;HRun=0;HaplotypeScore=277.5905;InbreedingCoeff=0.0836;MQ=30.50;MQ0=17;MQRankSum=-1.991;QD=3.90;ReadPosRankSum=1.024;VQSLOD=2.2801;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:0,3:2:1.25:0,1,3	./.	0/0:61,0:16:35.51:0,36,705	0/0:70,0:20:59.20:0,59,1017	0/0:7,2:9:2.57:0,3,34	0/0:8,2:19:14.52:0,15,160	0/0:24,0:24:45.79:0,46,434	0/0:14,0:12:23.77:0,24,213	0/0:10,5:15:23.55:0,24,252	0/1:25,2:27:65.54:229,0,66	0/0:7,3:11:12.93:0,13,77	0/0:17,0:16:25.06:0,25,176	0/0:27,0:27:68.77:0,69,566	0/0:29,0:29:53.82:0,54,470	0/1:0,2:2:0.02:0,0,0	0/0:7,1:9:10.06:0,10,80	./.	0/1:8,1:9:61.02:91,0,61	0/1:9,0:9:11.38:27,0,11	0/0:17,6:24:32.02:0,32,213	0/0:34,5:37:17.06:0,17,211	0/0:27,0:27:43.72:0,44,380	0/0:21,0:21:42.95:0,43,308	0/1:20,0:20:0.07:1,0,0	0/0:11,1:11:26.46:0,26,236	0/1:12,1:13:38.61:80,0,39	0/0:2,1:3:2.80:0,3,7	0/1:7,0:7:36.47:36,0,46
chr10	93329690	.	CA	C	188.28	PASS	AB=1.000;AC=8;AF=0.154;AN=52;BaseQRankSum=1.331;DP=526;FS=1.333;HRun=2;HaplotypeScore=271.7544;InbreedingCoeff=0.2040;MQ=30.49;MQ0=18;MQRankSum=-1.119;QD=2.09;ReadPosRankSum=2.121;VQSLOD=-0.6631;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:2:2.04:0,2,6	./.	0/0:61,0:15:32.85:0,33,453	0/0:69,0:18:44.79:0,45,573	0/0:9,0:9:2.95:0,3,20	0/0:19,0:19:7.13:0,7,49	0/0:23,0:23:22.98:0,23,100	0/0:13,1:12:16.84:0,17,191	0/0:15,0:15:23.27:0,23,146	0/1:28,0:27:12.88:144,0,13	0/0:10,1:11:2.94:0,3,19	0/0:18,0:17:11.80:0,12,54	0/0:28,0:27:37.16:0,37,189	0/0:30,0:30:26.99:0,27,142	0/1:2,0:2:0:0,0,0	0/0:8,1:9:6.09:0,6,41	./.	0/1:9,0:9:34.85:41,0,35	1/1:10,0:9:8.19:42,8,0	0/0:23,1:24:12.63:0,13,68	0/0:38,1:37:5.96:0,6,61	0/0:27,0:27:23.23:0,23,145	0/0:21,0:21:12.34:0,12,80	0/1:20,0:20:0.08:0,0,0	0/0:12,0:11:16.04:0,16,101	0/1:14,0:13:15.98:57,0,16	0/0:3,0:3:0.76:0,1,2	0/1:7,0:7:20.77:21,0,22
chr10	93329691	.	AAC	A	2121.40	PASS	AB=0.704;AC=34;AF=0.739;AN=46;BaseQRankSum=4.433;DP=516;FS=8.094;HRun=0;HaplotypeScore=251.3233;InbreedingCoeff=0.4839;MQ=30.68;MQ0=19;MQRankSum=2.048;QD=6.28;ReadPosRankSum=3.890;VQSLOD=1.5309;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:2:2.74:0,3,12	./.	0/0:58,0:15:26.66:0,27,438	0/0:67,0:17:32.93:0,33,454	./.	1/1:11,7:19:8.70:89,9,0	1/1:2,19:21:30.05:371,30,0	0/1:12,0:13:33.16:41,0,33	./.	1/1:6,0:23:34.10:221,34,0	0/1:5,0:11:0:0,0,0	1/1:2,12:14:15.01:174,15,0	1/1:4,24:27:38.53:535,39,0	1/1:3,25:28:26.77:313,27,0	./.	1/1:3,0:9:7.50:33,7,0	0/1:4,0:2:0:0,0,0	0/1:2,0:9:2.93:42,0,3	1/1:4,0:9:19.69:90,20,0	./.	0/1:20,1:39:0.02:0,0,0	1/1:1,23:24:5.97:59,6,0	0/1:1,20:21:0:0,0,0	1/1:3,18:21:2.86:20,3,0	1/1:3,11:13:8.99:87,9,0	1/1:4,0:13:16.15:118,16,0	1/1:1,0:3:2.84:14,3,0	1/1:0,0:6:9.98:43,10,0
chr10	93329693	.	C	CAT	962	PASS	AB=0.957;AC=13;AF=0.271;AN=48;BaseQRankSum=0.729;DP=543;FS=21.914;HRun=0;HaplotypeScore=261.3504;InbreedingCoeff=0.2713;MQ=31.02;MQ0=23;MQRankSum=-3.602;QD=5.83;ReadPosRankSum=-2.805;VQSLOD=1.1692;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:4:1.81:0,2,5	0/1:1,0:1:0:0,0,0	0/0:55,0:14:30.09:0,30,435	0/0:64,0:15:22.76:0,23,481	./.	0/0:20,0:20:5.88:0,6,36	0/0:26,0:25:26.02:0,26,161	1/1:16,5:14:32.93:523,33,0	0/1:15,0:15:0.01:0,0,0	0/1:23,1:23:24.83:221,0,25	./.	0/0:17,0:16:8.38:0,8,43	0/0:31,0:30:46.31:0,46,280	0/0:32,0:32:20.41:0,20,126	./.	0/0:9,0:9:4.44:0,4,15	0/0:4,0:2:2.74:0,3,12	0/1:8,1:9:16.14:58,0,16	0/1:9,1:9:9.54:66,0,10	./.	1/1:38,4:41:2.36:24,2,0	0/0:25,0:25:2.94:0,3,18	0/1:23,0:22:0.18:0,0,0	0/0:22,0:22:0.37:0,0,1	0/0:17,0:16:2.94:0,3,18	0/1:13,1:13:26.07:79,0,26	0/0:3,0:3:1.55:0,2,4	1/1:6,0:6:10.89:119,11,0
chr10	93329701	.	CAT	C	747.11	PASS	AB=0.965;AC=21;AF=0.389;AN=54;BaseQRankSum=4.556;DP=606;FS=32.527;HRun=0;HaplotypeScore=276.5579;InbreedingCoeff=0.0649;MQ=30.15;MQ0=28;MQRankSum=-0.337;QD=2.24;ReadPosRankSum=5.829;VQSLOD=1.0614;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:5:2.74:0,3,12	0/1:1,0:1:0:0,0,0	0/0:46,0:12:7.90:0,8,401	0/0:58,0:10:26.38:0,26,365	0/0:7,1:8:0:0,0,0	0/1:19,0:19:22.50:38,0,23	1/1:34,0:32:27.47:141,27,0	0/0:46,1:31:3.50:0,3,148	0/1:13,1:14:0:0,0,0	1/1:23,0:22:5.85:65,6,0	1/1:13,0:12:3.07:8,3,0	0/1:19,1:19:64.47:91,0,64	0/1:32,2:33:19.77:312,0,20	0/1:32,3:34:81.85:110,0,82	./.	0/0:9,0:9:1.02:0,1,6	0/1:5,0:3:0:0,0,0	0/0:10,0:10:7.71:0,8,41	0/1:13,0:10:12.90:13,0,17	0/1:22,4:24:0:0,0,0	0/0:45,0:47:6.73:0,7,32	0/1:26,1:27:10.53:11,0,11	0/0:29,0:28:14.92:0,15,115	0/1:27,1:28:10.53:11,0,66	0/1:22,0:21:10.99:11,0,55	0/1:13,0:13:3.09:8,0,3	0/0:3,0:3:2.54:0,3,18	1/1:6,0:6:9.63:68,10,0
chr10	93329713	.	T	TGCA	632.88	PASS	AB=0.989;AC=16;AF=0.286;AN=56;BaseQRankSum=6.128;DP=639;FS=2.783;HRun=0;HaplotypeScore=292.2583;InbreedingCoeff=0.1937;MQ=31.79;MQ0=32;MQRankSum=-4.777;QD=3.12;ReadPosRankSum=-3.846;VQSLOD=1.2021;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:7:0.03:0,0,0	0/0:2,0:2:0:0,0,0	0/0:33,0:9:21.03:0,21,325	0/0:49,0:10:20.04:0,20,349	0/1:9,0:9:0.09:0,0,0	0/0:14,0:16:18.06:0,18,326	0/0:43,0:41:42.49:0,42,779	0/0:62,0:39:75.03:0,75,1190	1/1:14,0:13:2.66:21,3,0	0/1:22,0:20:99:125,0,704	1/1:8,2:9:5.85:40,6,0	0/0:22,0:21:36.12:0,36,663	0/0:38,0:37:68.38:0,68,1209	0/0:38,0:37:60.20:0,60,1095	0/1:8,0:8:0.01:0,0,0	0/1:10,0:10:81.14:81,0,99	0/0:4,0:4:0:0,0,1	0/1:8,0:8:99:122,0,165	0/1:19,0:12:99:112,0,313	1/1:29,0:26:8.66:60,9,0	0/1:44,2:45:35.55:36,0,55	0/0:31,0:31:11.53:0,12,214	0/0:32,0:31:21.94:0,22,385	0/0:33,0:33:24.39:0,24,408	0/0:24,0:23:21.07:0,21,386	0/1:13,1:14:99:151,0,465	0/1:4,0:4:31.67:32,0,103	0/0:5,0:5:5.92:0,6,71
chr10	93329723	.	T	TAC	5165.03	PASS	AB=0.892;AC=22;AF=0.393;AN=56;BaseQRankSum=-8.475;DP=681;FS=53.297;HRun=0;HaplotypeScore=281.5891;InbreedingCoeff=0.5631;MQ=33.72;MQ0=30;MQRankSum=8.265;QD=12.30;ReadPosRankSum=-2.176;VQSLOD=2.4190;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:10:0.01:0,0,0	0/0:2,0:2:0:0,0,0	0/1:20,0:5:0:0,0,0	0/0:33,0:6:12.04:0,12,150	0/0:9,0:9:8.99:0,9,80	0/1:10,8:18:16.50:247,0,17	1/1:26,23:47:23.05:817,23,0	0/0:75,0:46:52.35:0,52,728	0/1:19,0:18:2.26:2,0,78	0/0:24,0:22:43.65:0,44,433	0/0:11,0:10:8.97:0,9,70	1/1:10,16:26:45.13:690,45,0	1/1:19,20:38:57.60:833,58,0	1/1:21,23:42:71.69:1054,72,0	1/1:12,0:11:3.01:34,3,0	0/0:13,0:13:17.43:0,17,171	0/0:8,0:6:2.95:0,3,19	0/0:11,0:11:12.02:0,12,139	0/0:22,0:12:29.77:0,30,280	0/0:26,0:23:14.98:0,15,124	0/1:54,0:52:20.63:21,0,40	1/1:15,16:31:23.86:356,24,0	0/1:16,17:32:9.46:369,0,9	1/1:14,20:33:9.40:400,9,0	1/1:7,20:26:21.07:344,21,0	0/0:15,0:14:21.69:0,22,368	0/0:6,0:6:12.48:0,12,117	0/0:5,0:5:5.97:0,6,46
chr10	93329725	.	C	CAT	2262.39	PASS	AB=0.942;AC=16;AF=0.286;AN=56;BaseQRankSum=-6.107;DP=704;FS=34.543;HRun=0;HaplotypeScore=296.6803;InbreedingCoeff=0.2957;MQ=34.25;MQ0=30;MQRankSum=8.117;QD=5.74;ReadPosRankSum=3.003;VQSLOD=1.4496;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:2,12:11:0.01:0,0,0	0/0:0,2:2:0:0,0,0	0/0:18,0:3:8.95:0,9,70	0/0:30,0:6:18.03:0,18,232	0/0:9,0:9:8.50:0,8,62	0/1:20,0:20:48.56:108,0,49	0/1:48,0:46:57.86:331,0,58	0/0:74,0:46:73.05:0,73,1004	0/0:20,0:19:14.38:0,14,58	0/0:26,0:24:41.36:0,41,402	0/0:12,0:11:8.36:0,8,40	0/1:25,0:25:2.50:299,0,3	0/1:40,0:39:15.72:423,0,16	1/1:47,0:45:13.58:478,14,0	1/1:5,11:15:3.01:51,3,0	0/0:14,0:14:19.84:0,20,142	0/0:12,0:9:3:0,3,29	0/0:11,0:11:23.40:0,23,209	0/0:22,0:12:31.91:0,32,261	0/0:27,0:24:13.73:0,14,59	0/1:55,0:53:31.69:32,0,63	0/1:31,0:31:9.97:151,0,10	0/1:34,0:33:40.71:170,0,41	1/1:35,0:34:19.96:202,20,0	1/1:28,0:26:20.98:183,21,0	0/0:18,0:17:37.84:0,38,410	0/0:6,0:6:16.64:0,17,97	0/0:6,0:6:5.59:0,6,21
chr10	93329726	.	A	ATG	217.36	PASS	AB=0.986;AC=10;AF=0.179;AN=56;BaseQRankSum=-1.420;DP=706;FS=17.609;HRun=0;HaplotypeScore=304.1547;InbreedingCoeff=0.0574;MQ=34.36;MQ0=30;MQRankSum=-2.563;QD=0.74;ReadPosRankSum=3.776;VQSLOD=0.9032;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:11:0.01:0,0,0	0/0:2,0:2:0:0,0,0	0/0:18,0:3:9.02:0,9,111	0/0:29,0:6:18.06:0,18,286	0/0:10,0:10:9.01:0,9,102	0/0:20,0:20:5.29:0,5,156	0/0:48,0:46:22.41:0,22,261	0/0:78,0:46:77.05:0,77,1135	0/0:20,0:19:17.96:0,18,154	0/0:26,1:24:31.46:0,31,686	0/0:12,0:11:8.99:0,9,79	0/1:25,0:25:27.10:27,0,121	0/1:36,0:37:99:138,0,151	0/1:47,0:45:53.43:53,0,147	0/1:16,0:15:18.04:28,0,18	0/0:14,0:14:21.03:0,21,236	0/0:12,0:9:0.47:0,0,1	0/0:11,0:11:24.06:0,24,301	0/0:23,0:13:36.04:0,36,432	0/0:26,0:24:17.99:0,18,160	0/1:53,4:54:65.99:66,0,72	0/1:34,0:34:7.51:8,0,74	0/0:33,0:32:7.96:0,8,118	0/1:35,0:34:4.55:5,0,37	1/1:27,0:25:1.43:20,1,0	0/0:18,0:17:42.01:0,42,548	0/0:6,0:6:18.02:0,18,184	0/0:6,0:6:8.47:0,8,57
chr10	93329737	.	TACACACACACATGCAC	T	8209.69	PASS	AB=0.988;AC=27;AF=0.500;AN=54;BaseQRankSum=0.858;DP=744;FS=16.235;HRun=0;HaplotypeScore=377.8720;InbreedingCoeff=0.5475;MQ=37.18;MQ0=24;MQRankSum=-9.932;QD=21.60;ReadPosRankSum=-1.057;VQSLOD=2.0680;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:16:4.31:0,4,14	1/1:2,0:2:0.47:1,0,0	./.	0/0:21,0:5:14.85:0,15,107	1/1:10,2:12:8.66:284,9,0	0/0:21,0:21:35.95:0,36,1442	0/0:48,0:46:53.31:0,53,1884	0/1:85,0:47:56.82:625,0,57	1/1:21,3:23:27.09:862,27,0	0/1:30,1:29:74.54:1104,0,75	1/1:12,1:12:9.03:343,9,0	0/0:31,0:31:72.16:0,72,3424	0/0:33,0:32:59.17:0,59,2269	0/0:45,0:43:72.39:0,72,3354	0/1:22,0:21:31.35:31,0,115	1/1:19,1:20:26.97:766,27,0	0/1:13,0:10:28.39:28,0,43	1/1:13,2:15:22.44:669,22,0	1/1:19,1:13:22.53:662,23,0	1/1:23,4:26:18.06:704,18,0	0/1:55,1:52:49.16:124,0,49	0/0:31,0:31:30.28:0,30,1431	0/0:26,0:26:32.88:0,33,1864	0/0:42,0:41:56.51:0,57,2348	0/0:28,0:26:27.01:0,27,1545	1/1:22,1:22:59.76:1233,60,0	1/1:9,1:9:23.97:632,24,0	1/1:5,1:6:5.98:140,6,0
chr10	93329748	.	ATG	A	4562.69	PASS	AB=0.859;AC=25;AF=0.446;AN=56;BaseQRankSum=5.009;DP=775;FS=0.000;HRun=0;HaplotypeScore=281.5831;InbreedingCoeff=0.4742;MQ=40.68;MQ0=17;MQRankSum=-9.163;QD=11.29;ReadPosRankSum=-2.207;VQSLOD=3.6833;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:19:3:0,3,28	0/1:2,0:2:0:0,0,0	0/0:15,2:3:5.69:0,6,50	0/0:29,2:13:28.91:0,29,322	1/1:8,7:15:5.56:96,6,0	0/0:19,1:21:35.48:0,35,695	0/0:45,0:43:61.74:0,62,1070	0/1:64,5:41:90.98:526,0,91	1/1:16,12:27:30.09:453,30,0	1/1:25,10:34:12.06:715,12,0	1/1:9,6:14:15.03:216,15,0	0/0:36,0:36:89.26:0,89,1661	0/0:36,0:35:69.49:0,69,1296	0/0:43,0:41:88.52:0,89,1565	0/1:28,0:27:13.26:13,0,138	0/1:9,13:22:9.74:345,0,10	0/1:15,3:15:19.83:115,0,20	0/1:8,5:13:14.93:292,0,15	1/1:22,4:18:20.29:405,20,0	1/1:19,11:29:18.06:293,18,0	0/1:47,8:51:38.42:38,0,88	0/0:28,1:29:35.40:0,35,699	0/0:22,1:23:36.04:0,36,706	0/0:38,1:38:53.83:0,54,1136	0/0:27,0:25:25.47:0,25,489	1/1:18,11:28:23.41:718,23,0	1/1:7,5:11:18.05:281,18,0	1/1:6,0:6:5.38:57,5,0
chr10	93329749	.	TGCAC	T	4453.16	PASS	AB=0.968;AC=29;AF=0.518;AN=56;BaseQRankSum=5.336;DP=775;FS=6.547;HRun=0;HaplotypeScore=292.2705;InbreedingCoeff=0.6480;MQ=40.88;MQ0=17;MQRankSum=-8.764;QD=10.58;ReadPosRankSum=-3.165;VQSLOD=2.8152;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:19:2.58:28,3,0	0/1:3,0:3:0:0,0,0	0/0:19,0:3:6.02:0,6,93	0/0:32,0:13:33.90:0,34,376	0/1:14,1:15:10.46:36,0,10	0/0:21,0:21:34.87:0,35,959	0/0:44,0:42:63.78:0,64,1512	1/1:55,4:38:18.21:827,18,0	1/1:25,4:28:33:360,33,0	0/1:33,3:34:9.94:673,0,10	1/1:13,1:13:14.98:161,15,0	0/0:37,0:37:93.13:0,93,2447	0/0:36,0:35:76.67:0,77,1779	0/0:43,0:41:92.99:0,93,2316	1/1:29,0:28:21.03:207,21,0	1/1:18,2:20:24.41:244,24,0	0/1:18,0:15:9.59:10,0,76	1/1:13,1:14:22.79:273,23,0	1/1:24,2:18:19.55:483,20,0	1/1:27,3:29:17.95:145,18,0	0/1:52,1:49:37.06:66,0,37	0/0:30,0:30:41.40:0,41,1057	0/0:23,0:23:35.18:0,35,1034	0/0:39,0:39:59.05:0,59,1658	0/0:27,0:25:26.92:0,27,720	1/1:29,0:28:56.66:697,57,0	1/1:11,1:11:19.89:200,20,0	1/1:6,0:6:5.96:44,6,0
chr10	93329750	.	GCACA	G	1857.14	PASS	AB=0.956;AC=23;AF=0.411;AN=56;BaseQRankSum=6.957;DP=789;FS=0.000;HRun=0;HaplotypeScore=302.6017;InbreedingCoeff=0.3509;MQ=41.04;MQ0=19;MQRankSum=-6.931;QD=4.52;ReadPosRankSum=-2.117;VQSLOD=1.7166;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:19:2.58:52,3,0	0/1:1,2:3:0:0,0,0	0/0:22,0:3:6.02:0,6,128	0/0:36,0:14:17.77:0,18,379	0/1:15,0:15:11.07:11,0,18	0/0:19,0:20:33.11:0,33,816	0/0:41,0:41:57.70:0,58,1330	0/1:62,0:38:95.04:322,0,95	1/1:29,0:28:28.50:170,29,0	0/1:37,0:35:99:223,0,115	1/1:14,0:13:12.51:66,13,0	0/0:36,0:37:93.02:0,93,2217	0/0:35,0:35:72.12:0,72,1571	0/0:42,0:41:87:0,87,2098	1/1:1,28:28:21.06:368,21,0	0/1:20,0:20:13.64:76,0,14	0/0:18,0:15:14.27:0,14,132	0/1:15,0:15:35.62:115,0,36	0/1:29,0:19:4.74:210,0,5	1/1:31,0:30:13.58:55,14,0	1/1:53,1:50:8.69:37,9,0	0/0:30,0:30:41.89:0,42,1011	0/0:23,0:23:35.26:0,35,918	0/0:42,0:41:65.56:0,66,1564	0/0:27,0:26:30.02:0,30,712	0/1:29,0:28:82.91:263,0,83	0/1:12,0:11:2.80:60,0,3	1/1:8,0:8:2.79:13,3,0
chr10	93329985	.	GGT	G	919.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.503;DP=631;FS=10.206;HRun=0;HaplotypeScore=123.5744;InbreedingCoeff=0.9896;MQ=78.42;MQ0=1;MQRankSum=1.841;QD=29.67;ReadPosRankSum=-0.793;VQSLOD=5.1070;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,113,980	0/0:7,0:7:21.02:0,21,202	0/0:33,0:23:30.93:0,31,540	0/0:31,0:22:21:0,21,337	0/0:26,0:26:64.53:0,65,414	0/0:19,0:19:57.18:0,57,1054	0/0:10,0:10:30.10:0,30,604	0/0:39,0:39:88.80:0,89,702	0/0:23,0:23:67.85:0,68,424	0/0:33,0:33:74.78:0,75,592	0/0:17,0:17:27.92:0,28,251	0/0:14,0:14:42.14:0,42,828	0/0:25,0:25:72.19:0,72,1302	0/0:17,0:17:51.14:0,51,976	0/0:27,0:27:74.89:0,75,671	0/0:25,0:25:64.94:0,65,413	1/1:0,31:31:63.21:1015,63,0	0/0:20,0:20:56.15:0,56,356	0/0:27,0:27:75.35:0,75,513	0/0:13,0:13:38.41:0,38,248	0/0:14,0:14:38.37:0,38,246	0/0:19,0:19:54.04:0,54,916	0/0:15,0:15:36.11:0,36,679	0/0:16,0:16:48.11:0,48,927	0/0:21,0:21:63.11:0,63,1067	0/0:27,0:27:74:0,74,493	0/0:30,0:30:68.03:0,68,443	0/0:11,0:11:32.41:0,32,201
chr10	93329986	.	GT	G	7286.52	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=6.835;DP=628;FS=5.404;HRun=10;HaplotypeScore=89.5000;InbreedingCoeff=0.9612;MQ=77.90;MQ0=1;MQRankSum=-0.999;QD=17.86;ReadPosRankSum=0.139;VQSLOD=5.1764;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:43,0:43:89.65:408,90,0	1/1:8,0:8:0.37:45,0,0	0/0:32,1:22:21.38:0,21,240	0/0:32,0:23:16.28:0,16,180	1/1:2,23:25:56.86:485,57,0	0/0:18,0:18:54.13:0,54,586	0/0:10,0:10:30.08:0,30,332	1/1:2,35:37:99:895,105,0	1/1:1,22:23:65.94:566,66,0	1/1:5,28:33:80.85:681,81,0	1/1:0,17:17:47.72:378,48,0	0/0:14,0:14:39.11:0,39,431	0/0:26,0:26:60.15:0,60,655	0/0:17,0:17:48.06:0,48,508	1/1:26,0:26:36.09:216,36,0	1/1:3,22:25:56.95:488,57,0	1/1:31,0:31:54.22:202,54,0	1/1:0,20:20:56.99:495,57,0	1/1:7,20:27:56.96:491,57,0	1/1:0,13:13:38.92:330,39,0	1/1:0,13:13:35.95:305,36,0	0/0:18,0:18:44.97:0,45,457	0/0:14,0:14:33.07:0,33,356	0/0:16,0:16:22.13:0,22,472	0/0:19,1:21:24.84:0,25,462	1/1:7,19:26:56.98:495,57,0	1/1:3,27:30:59.85:521,60,0	1/1:0,11:11:32.99:286,33,0
chr10	93329996	.	TA	T	2099.91	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=6.723;DP=635;FS=6.856;HRun=3;HaplotypeScore=105.4091;InbreedingCoeff=0.4824;MQ=78.18;MQ0=1;MQRankSum=-3.229;QD=7.95;ReadPosRankSum=5.429;VQSLOD=0.7117;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,45:45:99:1194,99,0	1/1:0,7:7:18.06:222,18,0	0/0:38,0:23:33.14:0,33,409	0/0:35,0:23:33.75:0,34,294	0/1:24,0:24:34.28:34,0,43	0/0:21,0:21:63.17:0,63,787	0/0:11,0:11:33.09:0,33,423	0/0:42,0:42:27.08:0,27,218	0/0:26,0:26:5.51:0,6,92	0/1:31,0:31:23.13:23,0,77	0/1:21,0:21:14.98:15,0,93	0/0:15,0:15:45.13:0,45,574	0/0:22,0:22:66.20:0,66,854	0/0:19,0:19:54.13:0,54,662	1/1:2,20:22:57.18:698,57,0	0/1:24,0:24:7.24:7,0,36	0/0:30,0:30:66.09:0,66,363	0/1:22,0:22:0.64:1,0,41	0/0:23,0:23:7.40:0,7,84	1/1:14,0:14:7.26:21,7,0	1/1:13,0:13:4.49:12,4,0	0/0:17,0:17:45.05:0,45,562	0/0:13,0:13:36.07:0,36,444	0/0:17,0:17:48.14:0,48,628	0/0:20,0:20:49.90:0,50,597	0/0:21,0:21:7.54:0,8,62	0/1:30,0:30:6.86:7,0,73	1/1:11,0:11:14.42:47,14,0
chr10	93330208	.	C	CAA	6153.43	PASS	AB=0.705;AC=25;AF=0.446;AN=56;BaseQRankSum=-11.125;DP=521;FS=14.103;HRun=11;HaplotypeScore=84.6360;InbreedingCoeff=0.7992;MQ=69.05;MQ0=7;MQRankSum=1.262;QD=21.74;ReadPosRankSum=-3.102;VQSLOD=1.9556;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:41:87.71:0,88,381	0/0:0,0:11:24.70:0,25,108	0/0:18,0:14:9.78:0,10,192	0/0:18,0:9:16.58:0,17,143	1/1:3,14:20:47:555,47,0	0/0:9,0:10:17.96:0,18,224	0/0:22,0:22:48.04:0,48,465	1/1:8,24:32:66.20:934,66,0	1/1:4,10:18:31.05:338,31,0	1/1:4,12:17:39.09:522,39,0	1/1:4,7:16:31.58:307,32,0	0/0:1,0:15:38.42:0,38,166	0/0:2,0:18:35.67:0,36,154	0/0:6,0:17:31.47:0,31,156	0/0:2,0:16:32.93:0,33,143	1/1:7,12:21:32.08:408,32,0	0/1:24,0:24:0.13:0,0,7	0/1:5,16:24:13.58:471,0,14	1/1:8,10:18:27.09:389,27,0	1/1:6,12:18:33.08:455,33,0	1/1:4,11:16:24.08:348,24,0	0/0:1,0:9:18.95:0,19,80	0/0:5,0:16:24.94:0,25,124	0/0:1,0:15:32.93:0,33,142	0/0:0,0:9:19.21:0,19,83	1/1:4,21:26:5.77:667,6,0	1/1:7,18:27:53.67:738,54,0	0/1:1,0:5:16.11:21,0,16
chr10	93330224	.	AATT	A	295.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.426;DP=527;FS=0.000;HRun=0;HaplotypeScore=105.2604;InbreedingCoeff=0.9776;MQ=68.63;MQ0=8;MQRankSum=-4.698;QD=9.83;ReadPosRankSum=-2.976;VQSLOD=2.5733;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:39:99:0,114,2312	0/0:11,0:11:30.10:0,30,627	0/0:23,0:14:38.39:0,38,559	0/0:15,0:6:15.05:0,15,288	0/0:24,0:24:68.99:0,69,1446	0/0:11,0:11:33.11:0,33,686	0/0:17,0:17:51.17:0,51,1062	0/0:30,0:30:84.28:0,84,1714	0/0:16,0:16:42.14:0,42,859	0/0:20,0:20:57.15:0,57,1198	0/0:16,0:16:45.15:0,45,972	0/0:18,0:18:54.19:0,54,1110	0/0:21,0:21:54.19:0,54,1092	0/0:15,0:15:45.15:0,45,949	0/0:17,0:17:48.16:0,48,1003	0/0:15,0:15:39.13:0,39,833	1/1:25,5:30:30.57:389,31,0	0/0:26,0:26:59.55:0,60,1253	0/0:17,0:16:42.14:0,42,859	0/0:13,0:13:28.17:0,28,679	0/0:15,0:15:33.11:0,33,714	0/0:11,0:11:30.10:0,30,635	0/0:15,0:15:45.11:0,45,873	0/0:17,0:17:45.13:0,45,917	0/0:14,0:14:39.13:0,39,819	0/0:26,0:26:72.13:0,72,1494	0/0:26,0:26:65.81:0,66,1351	0/0:7,0:7:21.07:0,21,413
chr10	93330225	.	ATT	A	290.59	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.873;DP=522;FS=1.127;HRun=2;HaplotypeScore=95.5045;InbreedingCoeff=0.9752;MQ=68.66;MQ0=8;MQRankSum=-3.652;QD=10.02;ReadPosRankSum=-3.258;VQSLOD=-0.5899;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:38:99:0,114,1981	0/0:11,0:11:30.10:0,30,525	0/0:23,0:14:22.47:0,22,445	0/0:15,0:6:15.05:0,15,255	0/0:24,0:24:68.65:0,69,1217	0/0:11,0:11:33.11:0,33,580	0/0:18,0:18:54.18:0,54,953	0/0:30,0:30:84.28:0,84,1466	0/0:17,0:17:45.15:0,45,787	0/0:20,0:20:60.20:0,60,1040	0/0:16,0:16:45.15:0,45,808	0/0:18,0:18:54.18:0,54,956	0/0:20,0:20:54.18:0,54,943	0/0:15,0:15:45.15:0,45,803	0/0:17,0:17:48.16:0,48,843	0/0:14,0:14:39.13:0,39,698	1/1:7,22:29:30.57:385,31,0	0/0:26,0:26:59.56:0,60,1064	0/0:16,1:16:42.14:0,42,735	0/0:13,0:13:29.87:0,30,570	0/0:14,0:14:33.11:0,33,593	0/0:10,0:10:30.10:0,30,535	0/0:16,0:16:48.12:0,48,793	0/0:16,0:16:45.13:0,45,773	0/0:14,0:14:39.13:0,39,700	0/0:26,0:26:72.15:0,72,1273	0/0:25,0:25:66.18:0,66,1124	0/0:7,0:7:21.07:0,21,345
chr10	93333533	.	TACTGG	T	1211.67	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.580;DP=708;FS=0.834;HRun=0;HaplotypeScore=137.3611;InbreedingCoeff=0.9646;MQ=80.43;MQ0=0;MQRankSum=-3.044;QD=50.49;ReadPosRankSum=3.929;VQSLOD=3.7651;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.31:0,90,2763	0/0:9,0:9:24.06:0,24,661	0/0:17,0:17:51.14:0,51,1221	0/0:21,0:21:60.14:0,60,1494	0/0:7,0:7:21.06:0,21,582	0/0:20,0:20:54.18:0,54,1587	0/0:44,0:44:99:0,132,3880	0/0:27,0:27:66.23:0,66,2009	0/0:29,0:29:81.28:0,81,2482	0/0:33,0:33:93.32:0,93,2828	0/0:15,0:15:45.15:0,45,1394	0/0:41,0:41:99:0,111,3371	0/0:33,0:33:90.31:0,90,2653	0/0:28,0:28:75.23:0,75,2226	0/0:22,0:22:66.23:0,66,2029	0/0:25,0:25:75.25:0,75,2251	1/1:2,22:24:63.22:1307,63,0	0/0:39,0:39:99:0,102,2963	0/0:19,0:19:51.18:0,51,1554	0/0:16,0:16:48.15:0,48,1404	0/0:54,0:54:99:0,141,4247	0/0:19,0:19:51.63:0,52,1505	0/0:4,0:4:12.04:0,12,372	0/0:53,0:53:99:0,154,4587	0/0:22,0:22:60.21:0,60,1860	0/0:16,0:16:48.13:0,48,1281	0/0:21,0:21:60.21:0,60,1812	0/0:19,0:19:54.19:0,54,1672
chr10	93334660	.	GT	G	4198.25	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=9.326;DP=639;FS=3.945;HRun=10;HaplotypeScore=69.2466;InbreedingCoeff=0.9281;MQ=76.91;MQ0=0;MQRankSum=-0.529;QD=20.48;ReadPosRankSum=2.826;VQSLOD=4.7759;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.18:0,84,905	0/0:3,0:3:9.02:0,9,100	0/0:25,0:24:34.34:0,34,345	0/1:13,0:12:0.70:1,0,194	0/0:22,1:23:34.19:0,34,605	0/0:21,2:23:7.96:0,8,503	0/0:37,0:38:96.21:0,96,1048	0/0:34,0:34:72.16:0,72,768	0/0:15,0:15:21.59:0,22,430	0/0:27,0:27:66.17:0,66,725	0/0:12,0:11:36.06:0,36,368	1/1:0,16:16:41.99:365,42,0	1/1:2,30:32:83.94:723,84,0	1/1:2,25:27:74.98:651,75,0	0/0:23,1:24:31.09:0,31,563	0/0:26,0:28:71.97:0,72,742	1/1:3,33:36:83.98:729,84,0	0/0:28,1:29:52.15:0,52,795	0/0:18,2:20:13.04:0,13,365	0/0:14,0:14:33.09:0,33,365	0/0:19,0:19:42.11:0,42,465	1/1:1,22:24:68.02:579,68,0	1/1:1,15:17:44.03:370,44,0	1/1:6,19:25:50.96:443,51,0	1/1:2,13:15:38.99:338,39,0	0/0:8,0:30:74.66:0,75,446	0/0:26,1:27:43:0,43,659	0/0:11,0:11:33.09:0,33,365
chr10	93335032	.	CCA	C	1030.28	PASS	AB=0.949;AC=9;AF=0.161;AN=56;BaseQRankSum=9.420;DP=395;FS=6.077;HRun=0;HaplotypeScore=72.0473;InbreedingCoeff=0.2347;MQ=74.92;MQ0=0;MQRankSum=-0.919;QD=6.69;ReadPosRankSum=7.491;VQSLOD=1.8317;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,3:29:86.19:246,0,86	0/1:7,0:7:8.86:28,0,9	0/1:7,0:7:11.64:12,0,109	0/0:13,0:12:24.60:0,25,196	0/0:7,0:7:13.44:0,13,84	1/1:11,2:13:7.96:132,8,0	1/1:37,3:40:48.20:338,48,0	0/0:13,0:13:32.90:0,33,276	0/0:11,0:11:3:0,3,158	0/0:10,0:10:14.72:0,15,98	0/0:4,0:4:3:0,3,25	0/0:11,0:11:29.44:0,29,291	0/0:7,0:7:20.76:0,21,214	0/0:11,0:11:29.95:0,30,373	0/1:23,3:26:23.94:211,0,24	0/0:16,0:16:41.57:0,42,250	0/1:30,2:32:24.82:209,0,25	0/0:26,0:26:57.05:0,57,477	0/0:20,0:19:37.58:0,38,326	0/0:6,0:6:2.71:0,3,109	0/0:32,0:32:32.96:0,33,336	0/0:2,0:2:3.01:0,3,38	0/0:6,0:6:14.96:0,15,168	0/0:8,0:8:16.17:0,16,181	0/0:7,0:7:15.79:0,16,149	0/0:9,0:9:19.65:0,20,132	0/0:16,0:16:26.64:0,27,205	0/0:6,0:6:13.10:0,13,98
chr10	93335034	.	ACC	A	3606.60	PASS	AB=0.782;AC=16;AF=0.286;AN=56;BaseQRankSum=-2.031;DP=385;FS=2.196;HRun=11;HaplotypeScore=62.8885;InbreedingCoeff=0.5690;MQ=71.95;MQ0=0;MQRankSum=-0.036;QD=19.60;ReadPosRankSum=4.237;VQSLOD=2.6905;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,18:28:60.11:628,60,0	1/1:3,5:8:15.03:160,15,0	0/1:6,0:7:0.82:1,0,78	0/0:10,0:9:9.29:0,9,80	0/0:7,0:8:2.50:0,2,9	1/1:3,10:13:36.06:374,36,0	1/1:5,35:40:96.23:1021,96,0	0/0:11,0:11:0:0,0,0	0/0:9,0:11:24.35:0,24,132	0/0:6,0:9:15.21:0,15,71	0/0:3,0:3:0:0,0,0	0/0:8,0:11:22.52:0,23,213	0/0:7,0:7:9.02:0,9,111	0/0:11,0:11:24.05:0,24,316	1/1:7,19:26:57.14:606,57,0	0/0:6,0:16:33.44:0,33,145	1/1:5,26:31:72.17:765,72,0	0/0:18,0:25:56.75:0,57,338	0/1:14,1:19:7.11:7,0,97	0/1:2,1:5:23.40:23,0,25	0/0:20,1:31:8.27:0,8,162	0/0:2,0:2:3.01:0,3,46	0/0:7,0:7:11.31:0,11,123	0/1:5,1:6:22.95:23,0,54	0/0:7,0:7:8.50:0,9,81	0/0:3,0:9:15.47:0,15,67	0/0:9,0:16:20.93:0,21,97	0/0:5,0:7:16.21:0,16,85
chr10	93336851	.	AT	A	3554.81	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.579;DP=407;FS=30.871;HRun=8;HaplotypeScore=84.2976;InbreedingCoeff=0.7343;MQ=77.09;MQ0=2;MQRankSum=-2.709;QD=10.04;ReadPosRankSum=5.255;VQSLOD=0.3503;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:38.08:122,38,0	1/1:10,0:10:14.81:45,15,0	0/0:22,0:16:9.91:0,10,260	0/0:16,0:12:13.68:0,14,148	1/1:5,2:8:5.84:57,6,0	1/1:9,0:9:2.22:5,2,0	0/0:15,0:15:16.02:0,16,130	1/1:15,1:17:11.80:77,12,0	1/1:7,2:9:8.90:74,9,0	1/1:1,1:2:3.48:30,3,0	1/1:2,6:11:13.08:98,13,0	1/1:20,1:21:26.45:165,26,0	1/1:14,0:14:26.44:162,26,0	1/1:11,0:11:23.51:147,24,0	1/1:20,0:20:30.43:102,30,0	1/1:5,6:13:19.93:164,20,0	1/1:5,26:31:54.08:521,54,0	1/1:9,3:14:11.59:86,12,0	1/1:5,8:16:33.79:261,34,0	1/1:1,1:5:4.07:12,4,0	1/1:3,1:15:8.60:46,9,0	1/1:18,1:19:26.51:176,27,0	1/1:9,1:10:14.56:91,15,0	1/1:18,1:19:50.04:313,50,0	1/1:18,1:18:38.26:238,38,0	1/1:4,5:10:17.53:150,18,0	1/1:5,9:14:29.89:269,30,0	1/1:1,11:12:15.02:144,15,0
chr10	93336857	.	TTTGGG	T	2589.66	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=-5.599;DP=430;FS=0.629;HRun=0;HaplotypeScore=115.1745;InbreedingCoeff=0.3893;MQ=79.11;MQ0=3;MQRankSum=-2.626;QD=20.55;ReadPosRankSum=0.922;VQSLOD=3.4530;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:57.19:1208,57,0	1/1:0,7:7:21.07:459,21,0	0/0:25,0:19:42.13:0,42,931	0/0:21,0:15:38.90:0,39,652	0/0:9,0:9:12.47:0,12,159	0/0:11,0:11:24.08:0,24,471	0/0:16,0:16:39.13:0,39,777	0/1:13,0:13:60.44:60,0,339	0/0:10,0:10:20.52:0,21,254	0/1:6,0:6:11.23:11,0,169	0/0:13,0:13:25.19:0,25,298	0/0:20,0:20:31.84:0,32,281	0/0:15,0:15:27.02:0,27,248	0/0:11,0:11:26.97:0,27,237	1/1:1,20:21:48.16:967,48,0	0/1:12,0:12:10.77:11,0,201	0/0:29,0:29:63.19:0,63,1138	0/1:12,0:12:13.58:14,0,243	0/1:20,0:20:21.86:22,0,479	0/0:9,0:9:18.93:0,19,237	0/0:15,0:15:21.01:0,21,268	0/0:16,0:16:38.97:0,39,399	0/0:12,0:12:20.61:0,21,222	0/0:23,0:23:49.62:0,50,426	0/0:21,0:20:38.24:0,38,336	0/1:12,0:12:3.52:4,0,287	0/0:14,0:14:22.49:0,22,376	0/0:14,0:14:23.92:0,24,269
chr10	93336858	.	TTG	T	3659.12	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-2.654;DP=416;FS=13.381;HRun=0;HaplotypeScore=88.2795;InbreedingCoeff=0.5062;MQ=79.88;MQ0=3;MQRankSum=0.457;QD=14.29;ReadPosRankSum=5.458;VQSLOD=2.1299;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:53.14:249,53,0	1/1:7,0:7:19.59:93,20,0	0/0:26,0:20:2.44:0,2,388	0/0:21,0:15:18.46:0,18,255	0/0:6,0:6:9.55:0,10,53	0/0:11,0:11:20.77:0,21,82	0/0:17,0:17:35.76:0,36,209	0/1:11,0:12:2.37:2,0,56	0/0:8,0:8:1.76:0,2,71	0/0:5,0:5:10.92:0,11,67	0/1:12,0:12:1.76:2,0,71	1/1:2,18:20:29.18:416,29,0	1/1:0,15:15:27.09:396,27,0	1/1:0,11:11:27.02:373,27,0	1/1:22,0:22:45.69:205,46,0	0/1:10,0:10:8.93:9,0,38	0/0:28,0:28:14.94:0,15,77	0/1:10,0:10:7.13:7,0,77	0/1:19,0:19:22.44:22,0,130	0/1:9,0:9:6.48:6,0,48	0/1:15,0:15:10.49:10,0,59	1/1:2,13:15:23.46:365,23,0	1/1:3,9:12:12.98:233,13,0	1/1:1,21:23:51.14:714,51,0	1/1:1,20:20:39.11:556,39,0	0/0:11,0:11:12.26:0,12,88	0/0:14,0:14:10.78:0,11,105	0/0:13,0:13:16.71:0,17,84
chr10	93336859	.	TG	T	1675.77	PASS	AB=0.994;AC=32;AF=0.571;AN=56;BaseQRankSum=3.386;DP=419;FS=23.535;HRun=10;HaplotypeScore=89.9432;InbreedingCoeff=0.5646;MQ=78.79;MQ0=3;MQRankSum=0.949;QD=5.24;ReadPosRankSum=9.361;VQSLOD=-0.7158;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:39.78:124,40,0	1/1:7,0:7:15.54:48,16,0	0/1:25,1:20:1.10:1,0,130	0/0:20,0:14:0.98:0,1,85	0/0:6,0:6:2.73:0,3,38	1/1:1,11:12:3.49:184,3,0	1/1:6,11:17:23.98:208,24,0	0/0:13,0:13:5.14:0,5,54	0/0:9,0:9:7.35:0,7,91	0/0:5,0:5:8.66:0,9,61	0/0:12,0:12:12.24:0,12,99	1/1:20,0:20:28.86:158,29,0	1/1:15,0:15:25.84:136,26,0	1/1:11,0:11:25.94:141,26,0	1/1:22,0:22:35.31:110,35,0	0/1:10,0:10:3.81:4,0,41	1/1:28,0:28:11.57:72,12,0	0/0:10,0:10:12.25:0,12,88	0/1:19,0:19:2.22:2,0,136	0/0:9,0:9:14.80:0,15,99	0/0:15,0:15:16.17:0,16,119	1/1:15,0:15:26.24:141,26,0	1/1:12,0:12:12.31:88,12,0	1/1:23,0:23:47.38:244,47,0	1/1:21,0:20:36.72:191,37,0	0/1:11,0:11:4.13:4,0,75	0/1:15,0:15:5.33:5,0,82	0/1:13,0:13:3.53:4,0,46
chr10	93336937	.	A	AG	803.23	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-1.571;DP=291;FS=3.883;HRun=5;HaplotypeScore=35.6962;InbreedingCoeff=0.8743;MQ=90.61;MQ0=1;MQRankSum=-3.018;QD=26.77;ReadPosRankSum=1.562;VQSLOD=2.8842;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:15:36.05:452,36,0	1/1:1,5:6:18.06:237,18,0	0/0:14,0:12:33.06:0,33,344	0/0:13,0:12:5.92:0,6,98	0/0:13,0:13:39.10:0,39,419	0/0:7,0:7:18.05:0,18,193	0/0:11,0:11:30.04:0,30,311	0/0:10,0:10:27:0,27,253	0/0:10,0:10:30.03:0,30,295	0/0:8,0:8:24.04:0,24,249	0/0:15,0:15:45.11:0,45,484	0/0:12,0:12:27.07:0,27,290	0/0:9,0:9:21.05:0,21,226	0/0:7,0:7:21.05:0,21,226	1/1:2,7:9:21:255,21,0	0/0:8,0:8:18.04:0,18,192	0/0:12,0:12:27:0,27,265	0/0:6,0:6:15.04:0,15,161	0/0:9,0:9:21.03:0,21,216	0/0:10,0:10:27.07:0,27,290	0/0:9,0:9:27.01:0,27,269	0/0:12,0:12:36.04:0,36,368	0/0:22,0:22:57.14:0,57,612	0/0:10,0:10:12.01:0,12,117	0/0:10,0:9:18.04:0,18,193	0/0:9,0:9:24.05:0,24,251	0/0:12,0:12:36.08:0,36,380	0/0:2,0:2:3.01:0,3,32
chr10	93338955	.	CA	C	8380.14	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=19.848;DP=649;FS=8.042;HRun=5;HaplotypeScore=109.3159;InbreedingCoeff=0.9980;MQ=67.69;MQ0=0;MQRankSum=-2.163;QD=28.90;ReadPosRankSum=2.176;VQSLOD=4.3615;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.29:0,96,1281	0/0:13,0:13:39.12:0,39,519	0/0:8,0:8:18.03:0,18,206	0/0:10,0:10:27.08:0,27,348	1/1:3,12:15:33.07:364,33,0	0/0:19,0:19:57.19:0,57,780	0/0:34,0:34:99:0,99,1313	1/1:2,22:24:72.20:806,72,0	1/1:1,17:18:45.13:510,45,0	1/1:2,21:23:63.16:698,63,0	1/1:0,7:7:21.04:229,21,0	0/0:31,0:31:90.28:0,90,1199	0/0:31,0:31:87.29:0,87,1187	0/0:36,0:36:99:0,99,1306	0/0:33,0:33:93.31:0,93,1270	1/1:2,20:22:57.16:646,57,0	0/0:25,0:25:72.21:0,72,953	1/1:1,31:32:84.24:953,84,0	1/1:3,17:20:48.12:544,48,0	1/1:0,15:15:39.11:442,39,0	1/1:5,43:48:99:1361,120,0	0/0:17,0:17:51.16:0,51,683	0/0:12,0:12:36.12:0,36,492	0/0:35,0:35:99:0,102,1363	0/0:23,0:23:69.22:0,69,923	1/1:7,24:31:69.15:773,69,0	1/1:2,23:25:63.17:713,63,0	1/1:0,10:10:30.09:340,30,0
chr10	93339612	.	GGGGGTGAAGCT	G	16755.85	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=17.959;DP=582;FS=39.600;HRun=0;HaplotypeScore=210.1364;InbreedingCoeff=0.9975;MQ=74.45;MQ0=0;MQRankSum=-17.999;QD=70.11;ReadPosRankSum=7.301;VQSLOD=2.4430;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,13:22:27.09:831,27,0	1/1:1,10:11:24.08:846,24,0	0/0:21,0:21:57.20:0,57,2727	0/0:9,0:9:27.07:0,27,1177	0/0:19,0:19:45.15:0,45,2592	1/1:1,16:17:48.12:1491,48,0	1/1:7,21:28:48.16:1621,48,0	0/0:29,0:29:84.29:0,84,4212	0/0:24,0:24:69.23:0,69,3643	0/0:28,0:28:84.27:0,84,4221	0/0:10,0:10:30.10:0,30,1711	1/1:2,21:23:63.21:2226,63,0	1/1:3,12:15:30.10:924,30,0	1/1:1,24:25:66.23:2330,66,0	1/1:4,19:23:57.12:1843,57,0	0/0:15,0:15:42.14:0,42,2303	1/1:4,10:14:24.08:793,24,0	0/0:36,0:36:99:0,108,6075	0/0:30,0:30:90.31:0,90,4656	0/0:21,0:21:63.22:0,63,3307	0/0:37,0:37:99:0,102,5715	1/1:1,7:8:18.06:582,18,0	1/1:1,10:11:24.08:848,24,0	1/1:12,12:24:30.10:937,30,0	1/1:2,16:18:42.14:1484,42,0	0/0:23,0:23:66.21:0,66,3516	0/0:28,0:27:84.29:0,84,4834	0/0:13,0:13:39.13:0,39,2250
chr10	93340286	.	GA	G	11730.21	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=16.040;DP=714;FS=14.584;HRun=2;HaplotypeScore=72.9046;InbreedingCoeff=0.9996;MQ=85.94;MQ0=0;MQRankSum=-7.693;QD=33.51;ReadPosRankSum=2.614;VQSLOD=3.6635;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,49:51:99:1532,120,0	1/1:0,10:10:30.10:390,30,0	0/0:23,0:23:63.20:0,63,922	0/0:26,0:26:72.19:0,72,1021	0/0:23,0:23:69.23:0,69,1015	1/1:0,23:23:63.20:818,63,0	1/1:0,34:34:93.30:1208,93,0	0/0:34,0:34:99:0,99,1467	0/0:20,0:20:57.19:0,57,853	0/0:33,0:33:93.29:0,93,1371	0/0:26,0:26:75.25:0,75,1105	1/1:1,23:24:66.21:857,66,0	1/1:0,15:15:39.13:506,39,0	1/1:0,32:32:90.29:1168,90,0	1/1:1,27:28:25.07:813,25,0	0/0:31,0:31:93.28:0,93,1352	1/1:0,28:28:84.27:1090,84,0	0/0:25,0:25:72.18:0,72,1033	0/0:22,0:22:66.21:0,66,970	0/0:18,0:18:54.17:0,54,789	0/0:21,0:21:63.20:0,63,923	1/1:0,26:26:63.20:817,63,0	1/1:1,18:19:39.13:506,39,0	1/1:0,35:35:84.10:1090,84,0	1/1:0,25:25:72.23:935,72,0	0/0:21,0:21:63.21:0,63,942	0/0:31,0:31:93.32:0,93,1393	0/0:10,0:10:30.10:0,30,449
chr10	93344982	.	T	TGTTTATAGTGAATAGGAAC	61559.49	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=3.071;DP=717;FS=3.310;HRun=0;HaplotypeScore=332.4875;InbreedingCoeff=0.9975;MQ=75.70;MQ0=0;MQRankSum=-20.871;QD=177.92;ReadPosRankSum=3.768;VQSLOD=4.6034;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,10:38:89.89:6945,90,0	1/1:8,1:9:24.08:1809,24,0	0/0:33,0:31:90.30:0,90,3329	0/0:26,0:25:58.07:0,58,1973	0/0:20,0:20:60.21:0,60,3072	1/1:15,8:25:69.24:5182,69,0	1/1:25,5:36:75.72:4903,76,0	0/0:22,0:22:60.19:0,60,2567	0/0:18,0:18:54.19:0,54,2895	0/0:27,0:27:75.24:0,75,3544	0/0:6,0:6:15.05:0,15,738	1/1:19,10:33:78.27:6175,78,0	1/1:13,9:25:57.20:4545,57,0	1/1:18,13:35:89.81:6993,90,0	1/1:20,12:36:90.31:6582,90,0	0/0:29,0:29:81.27:0,81,4093	1/1:15,4:21:48.16:3309,48,0	0/0:27,0:27:78.25:0,78,3536	0/0:29,0:29:84.29:0,84,3906	0/0:16,0:16:42.14:0,42,2035	0/0:54,0:54:99:0,157,7647	1/1:19,6:25:72.25:4987,72,0	1/1:13,4:17:39.13:2839,39,0	1/1:15,8:26:54.19:3740,54,0	1/1:15,2:20:45.63:3550,46,0	0/0:23,0:23:69.22:0,69,3341	0/0:29,0:29:81.28:0,81,3980	0/0:12,0:12:36.12:0,36,1877
chr10	93345688	.	GACAA	G	9003.58	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=11.782;DP=463;FS=0.374;HRun=0;HaplotypeScore=90.6676;InbreedingCoeff=0.9649;MQ=92.02;MQ0=2;MQRankSum=-8.321;QD=39.84;ReadPosRankSum=3.776;VQSLOD=5.1848;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:66.08:1250,66,0	1/1:0,4:4:9.03:171,9,0	0/0:24,0:24:51.84:0,52,1472	0/0:19,0:19:48.46:0,48,1243	0/0:9,0:9:27.09:0,27,729	1/1:3,14:17:39.13:740,39,0	1/1:1,16:17:30.10:569,30,0	0/0:19,0:19:57.18:0,57,1424	0/0:17,0:17:48.16:0,48,1295	0/0:14,0:14:39.13:0,39,1045	0/0:3,0:3:6.02:0,6,162	1/1:0,16:16:39:740,39,0	1/1:1,14:15:36.12:663,36,0	1/1:1,18:18:48.16:911,48,0	1/1:0,13:13:30:569,30,0	0/0:11,0:11:30.10:0,30,810	1/1:1,39:39:84.29:1584,84,0	0/0:30,0:30:84.29:0,84,2267	0/0:16,0:16:39.12:0,39,976	0/0:8,0:8:21.07:0,21,566	0/0:41,0:41:99:0,120,3105	1/1:0,7:7:12.04:228,12,0	1/1:1,8:9:14.98:284,15,0	1/1:3,17:20:32.20:612,32,0	1/1:0,17:17:36.12:683,36,0	0/0:7,0:7:18.06:0,18,486	0/0:15,0:15:45.15:0,45,1215	0/0:4,0:4:12.04:0,12,324
chr10	93345978	.	ACC	A	5012.24	PASS	AB=0.623;AC=31;AF=0.554;AN=56;BaseQRankSum=0.763;DP=437;FS=6.327;HRun=11;HaplotypeScore=84.1060;InbreedingCoeff=0.2322;MQ=78.00;MQ0=0;MQRankSum=-2.043;QD=14.87;ReadPosRankSum=5.136;VQSLOD=3.3170;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:69.17:729,69,0	1/1:1,2:3:6:63,6,0	0/0:11,0:11:17.32:0,17,166	0/0:15,1:16:2.35:0,2,280	0/1:4,2:9:45.42:45,0,71	1/1:1,16:18:41.84:425,42,0	1/1:3,25:28:51.10:537,51,0	0/1:8,3:18:65.39:65,0,80	0/1:5,1:11:5.96:6,0,70	0/1:7,1:14:7.12:7,0,72	0/1:0,1:6:16.44:16,0,27	1/1:5,13:18:33.07:345,33,0	1/1:3,8:11:21.03:213,21,0	1/1:1,13:14:30.07:316,30,0	1/1:0,12:12:33.08:349,33,0	0/0:1,0:11:19.96:0,20,68	1/1:4,25:29:69.14:730,69,0	0/1:7,2:21:56.66:57,0,64	0/0:17,1:24:3.75:0,4,95	0/0:3,0:6:2.50:0,2,9	0/1:8,2:30:39.40:39,0,134	0/1:4,4:8:9.15:83,0,9	0/0:14,0:14:2.72:0,3,17	1/1:9,23:32:63.13:667,63,0	1/1:8,7:17:31.77:295,32,0	0/1:5,1:10:21.70:23,0,22	0/0:3,1:14:4.71:0,5,58	0/0:0,0:4:7.49:0,7,26
chr10	93345990	.	GCA	G	4834.46	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=4.737;DP=446;FS=17.378;HRun=0;HaplotypeScore=90.1115;InbreedingCoeff=0.8832;MQ=73.71;MQ0=0;MQRankSum=-0.782;QD=21.68;ReadPosRankSum=8.075;VQSLOD=2.9332;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:69.07:720,69,0	1/1:4,0:4:6.02:65,6,0	0/0:9,0:9:18.02:0,18,222	0/0:13,0:14:31.11:0,31,292	0/0:12,0:12:34.03:0,34,391	1/1:23,0:23:41.52:424,42,0	1/1:28,0:28:52.05:552,52,0	0/0:15,0:15:38.82:0,39,484	0/0:13,0:13:39.03:0,39,481	0/0:15,0:15:44.74:0,45,566	0/0:9,0:9:26.81:0,27,267	1/1:21,0:21:31.66:354,32,0	1/1:10,0:10:24.03:257,24,0	1/1:19,0:19:23.11:309,23,0	1/1:12,0:12:33.08:351,33,0	0/0:11,0:11:30.10:0,30,415	1/1:27,0:27:69.64:731,70,0	0/0:20,0:20:56.70:0,57,676	0/0:21,0:21:61.56:0,62,797	0/0:4,0:4:6:0,6,62	0/0:35,0:35:90.26:0,90,1097	0/1:5,0:5:7.73:84,0,8	0/0:5,7:12:3.43:0,3,10	1/1:30,0:30:63.55:643,64,0	1/1:15,0:15:35.60:345,36,0	0/0:10,0:10:28.23:0,28,332	0/0:16,0:16:41.62:0,42,451	0/0:7,0:7:18.04:0,18,219
chr10	93346585	.	TA	T	11214.92	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=17.252;DP=691;FS=9.755;HRun=2;HaplotypeScore=85.8466;InbreedingCoeff=0.9998;MQ=79.35;MQ0=0;MQRankSum=-6.580;QD=31.59;ReadPosRankSum=5.966;VQSLOD=3.7665;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:93.30:1200,93,0	1/1:0,13:13:39.13:504,39,0	0/0:15,0:15:28.44:0,28,445	0/0:20,1:21:56.67:0,57,661	0/0:18,0:18:54.17:0,54,746	1/1:0,26:26:69.22:891,69,0	1/1:0,25:25:63.20:814,63,0	0/0:37,0:37:99:0,105,1381	0/0:25,0:25:72.18:0,72,933	0/0:34,0:34:99:0,102,1339	0/0:14,0:14:42.11:0,42,546	1/1:0,20:20:54.18:697,54,0	1/1:0,29:29:66.21:852,66,0	1/1:0,27:27:60.19:775,60,0	1/1:0,30:30:63.20:814,63,0	0/0:18,0:18:51.12:0,51,648	1/1:0,41:41:99:1317,102,0	0/0:21,0:21:54.15:0,54,728	0/0:22,0:22:63.18:0,63,832	0/0:18,0:18:51.16:0,51,705	0/0:31,0:31:90.29:0,90,1255	1/1:0,24:24:60.20:775,60,0	1/1:1,32:33:74.82:948,75,0	1/1:0,25:25:66.21:852,66,0	1/1:1,23:24:60.19:776,60,0	0/0:25,0:25:75.22:0,75,1015	0/0:26,0:26:78.24:0,78,1085	0/0:11,0:11:33.08:0,33,430
chr10	93349531	.	T	TAA	4955.55	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=0.200;DP=651;FS=2.516;HRun=12;HaplotypeScore=92.3330;InbreedingCoeff=0.9130;MQ=73.17;MQ0=0;MQRankSum=0.112;QD=19.21;ReadPosRankSum=0.014;VQSLOD=4.3181;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:39:62.70:0,63,632	0/0:13,0:14:4.27:0,4,248	0/0:17,0:16:13.07:0,13,103	0/1:10,0:9:5.36:5,0,21	0/0:32,0:32:73.58:0,74,667	1/1:4,17:26:48.62:581,49,0	1/1:4,18:25:44.07:542,44,0	0/0:33,0:36:36.07:0,36,499	0/0:23,0:25:58.92:0,59,491	0/0:19,0:22:31.81:0,32,379	0/0:18,0:19:33.45:0,33,334	1/1:5,13:23:37.95:398,38,0	1/1:7,16:25:22.25:573,22,0	1/1:4,21:31:65.17:796,65,0	0/0:34,1:36:29.36:0,29,726	0/0:20,0:22:27.08:0,27,388	1/1:4,0:24:11.90:104,12,0	0/0:21,0:21:47.94:0,48,431	0/0:17,0:18:31.58:0,32,324	0/0:18,0:22:38.40:0,38,423	0/0:20,0:20:25.46:0,25,369	1/1:4,15:24:49.20:536,49,0	1/1:3,12:16:20.81:258,21,0	1/1:3,11:15:35.61:471,36,0	1/1:5,14:22:35.33:393,35,0	0/0:31,0:32:58.89:0,59,562	0/0:18,0:18:38.86:0,39,347	1/1:3,13:16:21.96:297,22,0
chr10	93351102	.	A	ACCCTACTTCT	11613.60	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-2.716;DP=622;FS=1.970;HRun=0;HaplotypeScore=175.9737;InbreedingCoeff=0.9997;MQ=78.36;MQ0=0;MQRankSum=-14.426;QD=106.55;ReadPosRankSum=1.051;VQSLOD=5.3924;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,15:30:66.22:3083,66,0	1/1:4,7:11:30.10:1573,30,0	0/0:25,0:25:72.16:0,72,2021	0/0:15,0:15:45.12:0,45,1249	0/0:12,0:12:36.12:0,36,1193	0/0:17,0:17:51.17:0,51,1585	0/0:26,0:26:75.23:0,75,2164	0/0:41,0:41:99:0,112,2862	0/0:24,0:24:60.21:0,60,1982	0/0:22,0:22:63.17:0,63,1812	0/0:18,0:18:54.16:0,54,1530	0/0:20,0:20:57.20:0,57,1844	0/0:24,0:24:69.24:0,69,2171	0/0:25,0:25:75.24:0,75,2311	1/1:14,12:28:75.25:3283,75,0	0/0:23,0:23:69.24:0,69,2300	1/1:8,14:26:48.16:2303,48,0	0/0:18,0:18:54.15:0,54,1568	0/0:15,0:15:45.15:0,45,1277	0/0:19,0:19:51.17:0,51,1472	0/0:39,0:39:99:0,111,3445	0/0:19,0:19:57.20:0,57,1892	0/0:22,0:22:63.22:0,63,1994	0/0:37,0:37:99:0,99,3041	0/0:13,0:13:39.13:0,39,1267	0/0:16,0:16:42.13:0,42,1269	0/0:23,0:23:66.16:0,66,1860	1/1:3,9:14:30.10:1372,30,0
chr10	93351245	.	AG	A	283.56	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.455;DP=725;FS=2.825;HRun=1;HaplotypeScore=86.0672;InbreedingCoeff=0.9909;MQ=84.78;MQ0=0;MQRankSum=-3.509;QD=31.51;ReadPosRankSum=-0.338;VQSLOD=3.2596;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.28:0,81,1290	0/0:6,0:6:18.06:0,18,288	0/0:24,0:24:66.22:0,66,995	0/0:22,0:22:55.92:0,56,809	0/0:19,0:19:57.18:0,57,888	0/0:20,0:20:57.19:0,57,897	0/0:30,0:30:90.29:0,90,1411	0/0:41,0:41:99:0,123,1852	0/0:20,0:20:60.20:0,60,954	0/0:27,0:27:78.27:0,78,1241	0/0:12,0:12:36.12:0,36,576	0/0:22,0:22:66.22:0,66,1049	0/0:23,0:23:69.20:0,69,1075	0/0:30,0:30:90.28:0,90,1386	0/0:28,0:28:81.28:0,81,1292	0/0:24,0:24:72.25:0,72,1144	0/0:39,0:38:99:0,117,1855	0/0:28,0:28:84.23:0,84,1288	0/0:27,0:27:81.26:0,81,1245	0/0:23,0:23:69.19:0,69,1028	0/0:74,0:74:99:0,220,3380	0/0:22,0:22:63.20:0,63,979	0/0:17,0:17:45.15:0,45,716	0/0:34,0:34:99:0,102,1603	0/0:22,0:22:66.18:0,66,984	0/0:30,0:30:84.28:0,84,1313	0/0:23,0:21:69.23:0,69,1092	1/1:0,9:9:27.09:378,27,0
chr10	93351635	.	G	GAGA	4957.10	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.584;DP=549;FS=3.764;HRun=0;HaplotypeScore=85.3919;InbreedingCoeff=0.9773;MQ=83.00;MQ0=0;MQRankSum=-4.728;QD=51.64;ReadPosRankSum=5.203;VQSLOD=6.9060;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,38:40:84.29:1934,84,0	1/1:0,5:5:12.04:277,12,0	0/0:31,0:27:64.02:0,64,915	0/0:35,0:29:57.65:0,58,1050	0/0:11,0:11:33.10:0,33,536	0/0:17,0:17:48.15:0,48,792	0/0:30,0:30:81.28:0,81,1377	0/0:26,0:26:66.22:0,66,1112	0/0:18,0:18:54.18:0,54,917	0/0:17,0:17:48.16:0,48,795	0/0:7,0:7:21.07:0,21,357	0/0:26,0:26:75.25:0,75,1238	0/0:22,0:22:66.22:0,66,1106	0/0:18,0:18:54.17:0,54,877	1/1:0,17:17:45.15:1037,45,0	0/0:13,0:13:33.10:0,33,536	1/1:2,27:30:49.68:1502,50,0	0/0:17,0:17:51.16:0,51,824	0/0:20,0:20:60.14:0,60,961	0/0:15,0:15:42.12:0,42,663	0/0:41,0:41:99:0,117,1883	0/0:13,0:13:39.12:0,39,625	0/0:10,0:10:27.09:0,27,460	0/0:28,0:28:81.25:0,81,1321	0/0:9,0:9:27.09:0,27,460	0/0:17,0:17:48.16:0,48,813	0/0:12,0:12:30.07:0,30,457	1/1:0,4:4:9.03:208,9,0
chr10	93353848	.	A	AG	6083.54	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-12.402;DP=743;FS=2.410;HRun=2;HaplotypeScore=70.7337;InbreedingCoeff=0.9990;MQ=84.71;MQ0=0;MQRankSum=-1.185;QD=39.50;ReadPosRankSum=4.853;VQSLOD=5.2467;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:0,48:48:99:1814,126,0	1/1:2,8:11:21.07:302,21,0	0/0:27,0:27:69.22:0,69,855	0/0:24,0:24:36.67:0,37,706	0/0:25,0:25:72.23:0,72,893	0/0:13,0:13:36.10:0,36,434	0/0:38,0:38:99:0,111,1364	0/0:25,0:25:75.18:0,75,892	0/0:31,0:31:93.29:0,93,1152	0/0:24,0:24:69.21:0,69,847	0/0:19,0:19:57.18:0,57,706	0/0:37,0:37:99:0,102,1253	0/0:30,0:30:87.25:0,87,1064	0/0:35,0:35:96.26:0,96,1170	1/1:3,46:49:99:1994,129,0	0/0:22,0:22:66.18:0,66,794	1/1:0,32:32:96.32:1378,96,0	0/0:21,0:21:60.19:0,60,744	0/0:20,0:20:60.16:0,60,718	0/0:17,0:17:51.16:0,51,631	0/0:34,0:34:99:0,102,1264	0/0:17,0:17:48.15:0,48,594	0/0:24,0:24:72.21:0,72,880	0/0:25,0:25:75.19:0,75,911	0/0:22,0:22:66.21:0,66,818	0/0:29,0:29:84.26:0,84,1041	0/0:30,0:30:84.23:0,84,1015	1/1:1,13:14:42.14:595,42,0
chr10	93355254	.	TG	T	5659.90	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.582;DP=682;FS=1.168;HRun=1;HaplotypeScore=70.3856;InbreedingCoeff=0.9995;MQ=79.09;MQ0=0;MQRankSum=-2.442;QD=39.86;ReadPosRankSum=1.321;VQSLOD=5.5136;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,56:56:99:2181,157,0	1/1:0,10:10:27.09:377,27,0	0/0:14,0:14:42.12:0,42,631	0/0:20,0:20:26.35:0,26,786	0/0:24,0:24:69.24:0,69,1093	0/0:23,0:23:69.24:0,69,1103	0/0:29,0:29:87.30:0,87,1373	0/0:27,0:27:81.26:0,81,1254	0/0:17,0:17:48.16:0,48,766	0/0:27,0:27:81.28:0,81,1294	0/0:16,0:16:45.14:0,45,696	0/0:28,0:28:84.29:0,84,1340	0/0:16,0:16:48.13:0,48,720	0/0:25,0:25:75.26:0,75,1191	1/1:0,23:23:69.23:964,69,0	0/0:24,0:24:72.25:0,72,1151	1/1:1,38:39:99:1551,111,0	0/0:28,0:28:84.22:0,84,1281	0/0:18,0:18:54.18:0,54,854	0/0:19,0:19:57.17:0,57,878	0/0:46,0:46:99:0,138,2154	0/0:14,0:14:42.14:0,42,671	0/0:19,0:19:57.19:0,57,898	0/0:36,0:36:99:0,108,1694	0/0:23,0:23:69.22:0,69,1079	0/0:25,0:25:75.26:0,75,1199	0/0:22,0:21:66.21:0,66,1030	1/1:0,14:14:42.14:587,42,0
chr10	93356467	.	G	GGAGA	4694.59	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.484;DP=700;FS=2.942;HRun=0;HaplotypeScore=111.6609;InbreedingCoeff=0.9984;MQ=84.06;MQ0=2;MQRankSum=-4.766;QD=53.96;ReadPosRankSum=3.438;VQSLOD=5.8805;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,47:49:99:2608,102,0	1/1:2,6:9:21.07:540,21,0	0/0:30,0:30:54.82:0,55,886	0/0:36,0:33:41.14:0,41,772	0/0:19,0:19:52.41:0,52,883	0/0:18,0:18:51.15:0,51,827	0/0:28,0:28:66.23:0,66,1169	0/0:32,0:32:74.94:0,75,1077	0/0:16,0:16:36.08:0,36,506	0/0:26,0:26:75.25:0,75,1307	0/0:13,0:13:33.09:0,33,503	0/0:24,0:24:69.21:0,69,1143	0/0:20,0:20:54.13:0,54,867	0/0:15,0:15:42.13:0,42,694	1/1:5,21:27:60.21:1547,60,0	0/0:27,0:27:69.19:0,69,1112	0/0:44,0:44:99:0,123,2105	0/0:24,0:24:69.19:0,69,1167	0/0:22,0:22:54.15:0,54,853	0/0:16,0:16:39.12:0,39,665	0/0:36,0:36:84.19:0,84,1373	0/0:26,0:26:69.20:0,69,1169	0/0:25,0:25:69.20:0,69,1145	0/0:26,0:26:72.21:0,72,1192	0/0:20,0:20:45.15:0,45,797	0/0:32,0:32:87.20:0,87,1304	0/0:20,0:20:57.17:0,57,954	0/0:18,0:18:54.19:0,54,960
chr10	93357213	.	C	CA	2490.18	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.519;DP=626;FS=5.573;HRun=1;HaplotypeScore=64.1341;InbreedingCoeff=0.9495;MQ=78.37;MQ0=0;MQRankSum=-2.454;QD=36.09;ReadPosRankSum=2.305;VQSLOD=4.1010;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,43:45:99:1843,123,0	1/1:0,4:4:8.72:110,9,0	0/0:13,0:13:36.11:0,36,449	0/0:14,0:14:9.84:0,10,341	0/0:24,0:24:66.21:0,66,856	0/0:24,0:24:63.18:0,63,801	0/0:34,0:34:96.29:0,96,1224	0/0:26,0:26:78.23:0,78,976	0/0:28,0:28:81.25:0,81,1038	0/0:21,0:21:60.18:0,60,756	0/0:15,0:15:45.15:0,45,584	0/0:25,0:25:72.23:0,72,934	0/0:15,0:15:45.15:0,45,584	0/0:29,0:29:84.26:0,84,1076	1/1:2,18:20:45.15:674,45,0	0/0:19,0:19:54.15:0,54,672	0/0:30,0:30:90.27:0,90,1149	0/0:34,0:34:99:0,102,1303	0/0:24,0:24:69.20:0,69,880	0/0:18,0:18:54.17:0,54,693	0/0:51,0:51:99:0,141,1815	0/0:21,0:21:57.05:0,57,712	0/0:13,0:13:36.10:0,36,450	0/0:22,0:22:63.20:0,63,817	0/0:20,0:20:57.19:0,57,740	0/0:15,0:15:42.14:0,42,545	0/0:18,0:18:54.18:0,54,701	0/0:4,0:4:12.04:0,12,156
chr10	93358780	.	G	GTTGA	5086.99	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.558;DP=680;FS=1.587;HRun=0;HaplotypeScore=118.7608;InbreedingCoeff=0.9746;MQ=84.38;MQ0=1;MQRankSum=-6.126;QD=51.91;ReadPosRankSum=2.052;VQSLOD=5.5375;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,50:58:99:2822,108,0	1/1:0,3:3:8.95:173,9,0	0/0:20,0:20:51.15:0,51,813	0/0:26,0:26:53.40:0,53,817	0/0:10,0:10:27.09:0,27,489	0/0:17,0:17:48.10:0,48,796	0/0:28,0:28:72.21:0,72,1207	0/0:25,0:25:57.17:0,57,974	0/0:30,0:30:90.28:0,90,1577	0/0:24,0:24:72.25:0,72,1283	0/0:8,0:8:18.06:0,18,321	0/0:17,0:17:48.16:0,48,833	0/0:27,0:27:72.19:0,72,1218	0/0:32,0:32:90.22:0,90,1462	1/1:2,31:35:81.28:2092,81,0	0/0:34,0:34:90.30:0,90,1608	0/0:28,0:28:81.26:0,81,1440	0/0:23,0:23:63.13:0,63,1076	0/0:23,0:23:66.16:0,66,1030	0/0:14,0:14:42.13:0,42,729	0/0:44,0:44:99:0,126,2132	0/0:17,0:17:42.10:0,42,719	0/0:19,0:19:48.15:0,48,842	0/0:42,0:42:99:0,117,2002	0/0:22,0:22:63.18:0,63,1082	0/0:22,0:22:57.18:0,57,982	0/0:21,0:21:63.20:0,63,1085	0/0:9,0:9:24.08:0,24,436
chr10	93359237	.	TAAAACAAAAC	T	9470.66	PASS	AB=0.649;AC=31;AF=0.596;AN=52;BaseQRankSum=-4.610;DP=672;FS=3.121;HRun=0;HaplotypeScore=213.1437;InbreedingCoeff=0.7752;MQ=66.34;MQ0=6;MQRankSum=-9.145;QD=26.31;ReadPosRankSum=-1.190;VQSLOD=3.7047;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:41:51.13:0,51,681	0/0:8,0:14:15.03:0,15,153	./.	0/0:42,0:23:6.02:0,6,120	0/0:18,0:27:39.10:0,39,477	0/0:14,0:31:42.10:0,42,469	0/0:16,0:21:15.04:0,15,183	1/1:22,0:22:9.03:186,9,0	1/1:10,17:26:39.13:1152,39,0	1/1:18,6:24:18.06:532,18,0	1/1:11,11:22:27.09:765,27,0	1/1:13,16:29:33.11:975,33,0	0/0:14,2:14:2.97:0,3,20	1/1:18,8:26:24.08:709,24,0	0/0:17,0:30:33.08:0,33,408	1/1:10,3:13:4.74:175,5,0	0/0:16,0:31:57.20:0,57,2417	1/1:13,1:14:3.01:89,3,0	1/1:14,2:13:6.02:177,6,0	1/1:13,12:25:24.08:709,24,0	./.	1/1:13,11:24:27.09:762,27,0	1/1:15,6:21:6.02:176,6,0	1/1:16,6:22:9.03:252,9,0	1/1:6,15:21:42.14:1240,42,0	0/1:11,13:24:99:968,0,110	1/1:18,12:29:20.86:606,21,0	0/0:17,0:17:27.09:0,27,1305
chr10	93359598	.	AC	A	1524.96	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.182;DP=370;FS=1.910;HRun=5;HaplotypeScore=40.3238;InbreedingCoeff=0.9756;MQ=77.02;MQ0=0;MQRankSum=-0.934;QD=26.75;ReadPosRankSum=2.360;VQSLOD=2.8912;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:31:75.21:851,75,0	1/1:0,6:6:18.05:204,18,0	0/0:15,0:15:23.26:0,23,384	0/0:17,0:17:27.72:0,28,355	0/0:14,0:14:42.14:0,42,570	0/0:9,0:9:27.09:0,27,368	0/0:15,0:15:42.14:0,42,574	0/0:14,0:14:28.37:0,28,407	0/0:14,0:14:39.10:0,39,500	0/0:16,0:16:48.15:0,48,629	0/0:5,0:5:12.04:0,12,163	0/0:14,0:14:36.11:0,36,476	0/0:15,0:15:45.15:0,45,615	0/0:12,0:12:33.11:0,33,451	1/1:2,18:20:54.15:612,54,0	0/0:10,0:10:27.08:0,27,354	0/0:16,0:16:42.12:0,42,541	0/0:14,0:14:42.14:0,42,573	0/0:9,0:9:27.08:0,27,355	0/0:11,0:11:30.08:0,30,384	0/0:21,0:21:57.19:0,57,776	0/0:12,0:12:27.09:0,27,366	0/0:11,0:11:30.09:0,30,394	0/0:9,0:9:21.07:0,21,286	0/0:13,0:13:33.11:0,33,451	0/0:11,0:11:33.05:0,33,413	0/0:5,0:5:15.05:0,15,205	0/0:11,0:11:33.11:0,33,450
chr10	93360597	.	GTTA	G	263.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.513;DP=628;FS=0.000;HRun=0;HaplotypeScore=102.8022;InbreedingCoeff=0.9902;MQ=69.13;MQ0=12;MQRankSum=-1.855;QD=29.24;ReadPosRankSum=0.620;VQSLOD=3.5402;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.23:0,93,1994	0/0:9,0:9:24.04:0,24,460	0/0:35,0:18:51.17:0,51,1099	0/0:28,0:22:59.57:0,60,1271	0/0:25,0:25:72.23:0,72,1543	0/0:12,0:12:36.12:0,36,828	0/0:46,0:45:99:0,123,2570	0/0:29,0:29:83.34:0,83,1841	0/0:29,0:29:81.26:0,81,1805	0/0:21,0:21:60.20:0,60,1316	0/0:8,0:8:24.07:0,24,508	0/0:26,0:26:75.20:0,75,1624	0/0:11,0:10:30.02:0,30,540	0/0:14,0:14:36.12:0,36,828	0/0:17,0:17:36.12:0,36,791	0/0:15,0:15:45.15:0,45,1034	0/0:23,0:23:48.03:0,48,947	0/0:28,0:28:72.25:0,72,1624	0/0:25,0:25:72.71:0,73,1580	0/0:15,0:15:39.09:0,39,807	0/0:45,0:44:99:0,111,2302	0/0:12,0:11:30.10:0,30,640	0/0:11,0:11:32.85:0,33,683	0/0:28,0:27:63.04:0,63,1316	0/0:22,0:21:51.16:0,51,1063	0/0:23,0:22:63.17:0,63,1257	0/0:27,0:27:78.27:0,78,1761	1/1:0,9:9:21.07:355,21,0
chr10	93360609	.	GGT	G	533.48	PASS	AB=0.912;AC=18;AF=0.375;AN=48;BaseQRankSum=-2.085;DP=665;FS=13.250;HRun=0;HaplotypeScore=101.0327;InbreedingCoeff=0.5295;MQ=59.75;MQ0=26;MQRankSum=1.198;QD=2.31;ReadPosRankSum=1.133;VQSLOD=1.3480;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:3:0,3,25	./.	./.	./.	1/1:19,2:23:14.62:110,15,0	0/0:15,0:18:11.82:0,12,82	0/0:41,0:46:8.94:0,9,84	./.	1/1:20,3:25:14.70:125,15,0	0/1:24,0:23:7.73:8,0,22	1/1:9,1:9:3.01:32,3,0	0/0:28,0:30:11.98:0,12,122	0/0:10,0:10:2.99:0,3,23	0/0:22,0:22:13.98:0,14,90	0/0:20,0:20:3:0,3,25	1/1:11,3:15:11.86:111,12,0	0/0:15,0:32:21.46:0,21,192	0/1:22,4:28:49.37:73,0,49	0/0:22,0:21:0:0,0,0	1/1:11,1:12:3.01:32,3,0	1/1:43,1:43:5.71:46,6,0	0/0:16,0:15:6:0,6,51	0/0:16,0:16:2.79:0,3,41	0/0:22,0:26:11.97:0,12,96	0/0:22,0:23:11.22:0,11,94	1/1:19,4:22:6.01:65,6,0	1/1:23,2:27:11.28:92,11,0	0/0:10,0:11:14.96:0,15,124
chr10	93360812	.	TTATC	T	251.64	PASS	AC=2;AF=0.040;AN=50;BaseQRankSum=3.911;DP=512;FS=0.000;HRun=0;HaplotypeScore=94.5782;InbreedingCoeff=0.9911;MQ=89.67;MQ0=0;MQRankSum=-3.026;QD=25.16;ReadPosRankSum=2.118;VQSLOD=2.8476;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:22,0:22:60.19:0,60,1486	0/0:19,0:19:48.16:0,48,1191	0/0:18,0:18:48.15:0,48,1237	0/0:16,0:16:42.13:0,42,1062	0/0:35,0:35:96.32:0,96,2534	0/0:20,0:20:57.20:0,57,1499	0/0:19,0:19:51.18:0,51,1366	0/0:24,0:24:69.22:0,69,1706	0/0:14,0:14:39.13:0,39,1053	0/0:26,0:26:72.23:0,72,1872	0/0:31,0:30:81.26:0,81,2104	0/0:18,0:18:51.18:0,51,1357	./.	0/0:21,0:21:60.21:0,60,1559	0/0:31,0:31:90.31:0,90,2403	0/0:20,0:20:57.20:0,57,1494	0/0:14,0:14:42.14:0,42,1134	0/0:16,0:16:45.15:0,45,1215	0/0:20,0:20:51.18:0,51,1365	0/0:16,0:16:42.13:0,42,1063	0/0:11,0:11:30.10:0,30,808	0/0:29,0:29:84.29:0,84,2256	0/0:12,0:12:36.12:0,36,970	0/0:32,0:32:90.27:0,90,2218	0/0:18,0:17:54.17:0,54,1385	1/1:2,8:10:18.06:341,18,0
chr10	93361068	.	TGCGCGCGCGCGCGC	T	299.94	PASS	AB=0.909;AC=3;AF=0.060;AN=50;BaseQRankSum=0.647;DP=521;FS=7.003;HRun=0;HaplotypeScore=217.4710;InbreedingCoeff=0.4832;MQ=58.83;MQ0=6;MQRankSum=-2.657;QD=20.00;ReadPosRankSum=-0.651;VQSLOD=1.7214;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:9,0:8:10.95:11,0,212	0/0:8,0:4:9.02:0,9,150	0/0:13,0:13:27.09:0,27,1613	0/0:19,0:19:30.81:0,31,1699	0/0:34,0:34:78.22:0,78,4334	0/0:37,0:37:99:0,105,3961	0/0:18,0:18:45.13:0,45,2133	0/0:25,0:25:72.25:0,72,4039	0/0:12,0:12:36.11:0,36,1942	0/0:24,0:24:20.79:0,21,1103	0/0:18,0:18:45.14:0,45,2239	0/0:12,0:12:27.53:0,28,826	./.	0/0:14,0:14:42.10:0,42,2217	0/0:16,0:16:0.82:0,1,605	0/0:37,0:37:99:0,105,6331	0/0:20,0:18:51.17:0,51,1993	0/0:14,0:13:30.10:0,30,1828	0/0:65,0:65:99:0,169,9259	0/0:19,0:17:42.11:0,42,1944	0/0:11,0:12:18.06:0,18,1082	0/0:34,0:34:23.84:0,24,1224	0/0:9,0:9:18.06:0,18,1019	0/0:22,0:21:56.85:0,57,2608	0/0:23,0:23:59.68:0,60,3113	1/1:1,4:5:9.03:380,9,0
chr10	93361073	.	G	GCA	2355.53	PASS	AC=14;AF=0.292;AN=48;BaseQRankSum=5.596;DP=497;FS=0.000;HRun=0;HaplotypeScore=93.6220;InbreedingCoeff=0.9442;MQ=55.90;MQ0=11;MQRankSum=1.550;QD=19.31;ReadPosRankSum=3.847;VQSLOD=3.8929;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:7,0:2:2.90:0,3,16	./.	0/0:12,0:12:27:0,27,327	0/0:18,0:18:22.71:0,23,228	0/0:33,0:33:41.92:0,42,465	0/0:32,0:31:77.14:0,77,836	0/0:14,0:14:39.01:0,39,473	0/0:28,0:28:77.94:0,78,937	0/0:10,0:10:30.03:0,30,406	1/1:2,19:23:17.88:323,18,0	1/1:14,4:18:39.89:489,40,0	1/1:7,2:9:17.75:167,18,0	./.	0/0:15,0:15:39.01:0,39,494	0/0:16,0:16:14.98:0,15,133	0/0:36,0:36:96.82:0,97,1368	0/0:21,0:19:38.21:0,38,407	0/0:14,0:13:23.84:0,24,349	0/0:66,0:66:99:0,165,2060	1/1:12,5:15:36.08:552,36,0	1/1:1,9:12:18.06:329,18,0	1/1:5,29:35:21.02:366,21,0	1/1:5,3:8:20.80:314,21,0	0/0:19,0:18:51.08:0,51,625	0/0:20,0:20:53.09:0,53,632	0/0:4,0:4:8.52:0,9,42
chr10	93361094	.	TGTGTGTGTGTGTGCATGC	T	43.59	PASS	AB=0.935;AC=7;AF=0.140;AN=50;BaseQRankSum=-1.089;DP=540;FS=1.101;HRun=0;HaplotypeScore=221.5592;InbreedingCoeff=-0.0271;MQ=48.02;MQ0=25;MQRankSum=-4.909;QD=0.37;ReadPosRankSum=-2.307;VQSLOD=2.1820;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:11:0:0,0,0	./.	./.	0/0:10,0:1:3.01:0,3,40	0/0:17,0:17:21.07:0,21,938	0/0:18,0:18:22.81:0,23,712	0/0:33,0:32:41.98:0,42,1071	0/1:23,0:21:7.81:8,0,679	0/0:12,0:12:26.70:0,27,1280	0/0:29,0:27:63.89:0,64,2538	0/0:14,0:14:17.73:0,18,1045	0/0:20,0:20:23.30:0,23,523	0/0:21,0:21:24.10:0,24,732	0/0:12,0:12:2.98:0,3,29	0/1:9,0:9:0.86:1,0,15	0/0:12,0:12:33.11:0,33,1915	0/1:3,15:18:46.06:112,0,46	0/0:41,0:41:99:0,102,4780	0/1:21,0:19:8.35:8,0,1300	0/0:17,0:16:27.09:0,27,1344	0/0:63,0:61:99:0,112,5495	0/0:20,0:18:20.86:0,21,465	0/0:12,0:11:17.56:0,18,502	0/0:38,0:36:18.06:0,18,398	0/1:15,0:14:5.49:5,0,440	0/1:19,0:17:4.36:4,0,1430	0/0:21,0:21:44.89:0,45,2271	./.
chr10	93361107	.	GCA	G	273.53	PASS	AB=0.881;AC=17;AF=0.315;AN=54;BaseQRankSum=2.434;DP=521;FS=17.045;HRun=0;HaplotypeScore=105.4806;InbreedingCoeff=0.0302;MQ=47.23;MQ0=26;MQRankSum=-0.329;QD=0.99;ReadPosRankSum=-0.186;VQSLOD=0.7549;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,12:13:3:27,3,0	0/1:0,3:3:0:0,0,0	0/0:11,0:3:5.90:0,6,72	0/0:17,0:2:6.02:0,6,104	0/0:19,0:19:5.83:0,6,393	0/0:19,0:19:17.73:0,18,303	0/1:31,0:31:13.25:13,0,614	0/1:17,3:17:42.19:42,0,498	0/0:14,0:14:29.75:0,30,406	0/1:27,3:27:1.17:1,0,1027	0/0:11,0:11:20.90:0,21,359	0/1:15,3:18:22.62:23,0,114	0/0:18,0:18:22.57:0,23,276	0/1:11,2:13:6.43:40,0,6	1/1:1,10:10:5.95:69,6,0	0/0:13,0:13:38.15:0,38,578	1/1:15,1:16:5.95:54,6,0	0/0:40,0:40:99:0,111,1807	0/1:17,1:18:21.64:22,0,428	0/0:14,0:14:33.09:0,33,546	0/1:51,0:49:57.79:58,0,1543	0/0:16,2:16:10.94:0,11,126	0/1:12,1:12:18.90:19,0,103	0/0:25,5:27:17.82:0,18,205	0/1:15,2:15:5.44:5,0,131	0/1:19,1:19:50.27:50,0,610	0/0:17,1:18:3.30:0,3,572	./.
chr10	93361112	.	C	CGTGTGTGTGTGT	860.28	PASS	AB=0.909;AC=24;AF=0.444;AN=54;BaseQRankSum=2.161;DP=534;FS=7.505;HRun=0;HaplotypeScore=181.9698;InbreedingCoeff=0.4932;MQ=47.13;MQ0=22;MQRankSum=-3.779;QD=3.33;ReadPosRankSum=-4.528;VQSLOD=0.5337;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:14:3.01:38,3,0	0/1:3,0:3:0:0,0,0	0/0:15,0:3:4.01:0,4,83	0/0:19,0:2:3.01:0,3,48	0/0:15,0:18:27.09:0,27,598	0/0:11,0:20:1.48:0,1,58	1/1:27,0:34:13.78:225,14,0	0/1:19,0:16:44.28:44,0,75	0/0:12,0:12:5.32:0,5,477	0/0:32,0:30:21.30:0,21,602	0/0:8,0:9:12.04:0,12,381	1/1:17,2:19:8.69:86,9,0	1/1:10,4:17:3.95:55,4,0	1/1:14,0:14:5.06:87,5,0	1/1:13,0:11:2.50:24,3,0	0/0:13,0:15:30.06:0,30,762	1/1:18,0:18:8.39:131,8,0	0/0:32,0:37:51.17:0,51,1469	0/0:13,0:15:20.31:0,20,430	0/0:14,0:15:18.06:0,18,518	0/0:47,0:46:4.95:0,5,881	0/1:9,6:19:0:0,0,0	1/1:12,0:11:2.72:58,3,0	1/1:33,0:30:0.47:1,0,0	1/1:12,6:17:6.02:219,6,0	0/1:19,0:20:54.14:54,0,261	0/0:20,0:20:26.94:0,27,660	./.
chr10	93361411	.	TC	T	797.75	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.380;DP=747;FS=12.047;HRun=3;HaplotypeScore=100.4380;InbreedingCoeff=0.9830;MQ=78.54;MQ0=0;MQRankSum=-2.420;QD=28.49;ReadPosRankSum=1.822;VQSLOD=2.1397;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,116,906	0/0:7,0:7:14.93:0,15,117	0/0:16,0:16:42.14:0,42,577	0/0:21,0:21:49.04:0,49,641	0/0:19,0:19:51.16:0,51,712	0/0:17,0:17:48.16:0,48,680	0/0:35,0:35:99:0,102,1454	0/0:27,0:27:66.22:0,66,946	0/0:27,0:27:78.25:0,78,1104	0/0:44,0:44:99:0,123,1701	0/0:19,0:19:54.17:0,54,759	0/0:27,0:27:78.25:0,78,1095	0/0:23,0:23:63.21:0,63,906	0/0:33,0:33:99:0,99,1387	0/0:42,0:42:99:0,122,931	0/0:30,0:30:84.28:0,84,1201	1/1:1,27:28:72.23:893,72,0	0/0:19,0:19:57.19:0,57,817	0/0:29,0:29:78.26:0,78,1113	0/0:22,0:22:57.19:0,57,821	0/0:34,0:34:99:0,102,1450	0/0:29,0:28:69.23:0,69,982	0/0:22,0:22:54.18:0,54,769	0/0:36,0:36:99:0,108,1532	0/0:19,0:19:51.17:0,51,734	0/0:26,0:26:75.24:0,75,1063	0/0:44,0:44:99:0,129,1831	0/0:11,0:11:27.09:0,27,388
chr10	93364947	.	TC	T	3667.14	PASS	AB=0.950;AC=19;AF=0.339;AN=56;BaseQRankSum=2.331;DP=583;FS=1.224;HRun=10;HaplotypeScore=83.4417;InbreedingCoeff=0.8760;MQ=74.77;MQ0=1;MQRankSum=2.007;QD=17.98;ReadPosRankSum=3.861;VQSLOD=4.2348;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:46:93.04:0,93,429	0/0:6,1:7:8.39:0,8,39	0/0:24,0:23:7.66:0,8,333	0/1:17,1:19:7.82:8,0,121	0/0:14,0:14:24.06:0,24,265	1/1:6,20:27:62.01:526,62,0	1/1:4,16:20:47.98:417,48,0	0/0:20,0:20:27.05:0,27,289	0/0:15,0:15:39.11:0,39,431	0/0:18,2:20:10.02:0,10,326	0/0:11,0:11:21.05:0,21,223	1/1:4,17:21:53.98:468,54,0	1/1:2,12:14:35.99:313,36,0	1/1:8,20:28:62.96:545,63,0	0/0:23,0:23:50.81:0,51,254	0/0:25,2:27:20.57:0,21,678	0/0:24,0:25:63:0,63,678	0/0:17,0:20:44.95:0,45,479	0/0:23,0:23:45.10:0,45,487	0/0:15,0:16:44.93:0,45,462	0/0:44,4:47:3.78:0,4,858	1/1:5,17:22:50.02:423,50,0	1/1:3,9:12:20.55:181,21,0	1/1:5,16:21:28.20:371,28,0	1/1:4,16:20:47.99:417,48,0	0/0:14,0:14:23.87:0,24,229	0/0:18,0:18:48.12:0,48,523	0/0:8,0:8:15.95:0,16,75
chr10	93364948	.	C	CCCCT	4495.69	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-3.903;DP=596;FS=4.303;HRun=0;HaplotypeScore=129.9650;InbreedingCoeff=0.9823;MQ=74.10;MQ0=1;MQRankSum=-6.876;QD=45.87;ReadPosRankSum=-2.175;VQSLOD=5.0903;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,33:54:99:2372,114,0	1/1:2,5:7:9.03:225,9,0	0/0:23,0:22:55.18:0,55,875	0/0:20,0:20:29.84:0,30,357	0/0:14,0:14:33.08:0,33,510	0/0:27,0:27:75.18:0,75,845	0/0:20,0:20:60.14:0,60,669	0/0:19,0:19:45.71:0,46,621	0/0:15,0:15:42.13:0,42,741	0/0:21,0:21:41.96:0,42,647	0/0:11,0:11:29.69:0,30,386	0/0:21,0:21:57.16:0,57,666	0/0:14,0:14:39.10:0,39,449	0/0:27,0:27:75.19:0,75,852	1/1:14,13:27:72.07:1394,72,0	0/0:27,0:27:78.25:0,78,1375	0/0:26,0:26:72.14:0,72,1229	0/0:21,0:21:53.75:0,54,893	0/0:22,0:22:54.08:0,54,830	0/0:17,0:17:45.08:0,45,739	0/0:48,0:47:99:0,132,1965	0/0:22,0:22:53.99:0,54,615	0/0:11,0:11:24.06:0,24,274	0/0:20,0:20:54.09:0,54,601	0/0:19,0:19:51.14:0,51,593	0/0:15,0:15:30.02:0,30,406	0/0:18,0:18:51.15:0,51,874	1/1:6,4:10:30:505,30,0
chr10	93365004	.	GGTCCT	G	4361.36	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.605;DP=644;FS=0.000;HRun=0;HaplotypeScore=130.4362;InbreedingCoeff=0.9319;MQ=88.92;MQ0=0;MQRankSum=-6.867;QD=46.90;ReadPosRankSum=2.833;VQSLOD=5.1813;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,46:52:99:2300,111,0	1/1:0,1:1:3.01:62,3,0	0/0:24,0:24:69.20:0,69,1761	0/0:26,0:26:54.18:0,54,1492	0/0:22,0:22:63.22:0,63,1930	0/0:18,0:18:51.18:0,51,1568	0/0:25,0:25:75.24:0,75,2151	0/0:25,0:25:63.19:0,63,1835	0/0:15,0:15:42.14:0,42,1198	0/0:24,0:24:63.21:0,63,1775	0/0:11,0:11:33.11:0,33,994	0/0:19,0:19:54.18:0,54,1518	0/0:22,0:22:63.22:0,63,1897	0/0:28,0:28:78.27:0,78,2388	1/1:4,31:35:90.30:1812,90,0	0/0:29,0:29:75.26:0,75,2245	0/0:28,0:28:81.28:0,81,2411	0/0:22,0:22:63.22:0,63,1936	0/0:27,0:27:78.26:0,78,2170	0/0:16,0:16:48.16:0,48,1469	0/0:47,0:47:99:0,135,3875	0/0:25,0:25:72.25:0,72,2213	0/0:14,0:14:42.14:0,42,1290	0/0:20,0:20:54.19:0,54,1655	0/0:23,0:23:63.22:0,63,1875	0/0:19,0:19:57.20:0,57,1743	0/0:22,0:22:57.20:0,57,1748	1/1:1,4:5:9.03:186,9,0
chr10	93366134	.	GAA	G	740.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.259;DP=573;FS=4.851;HRun=10;HaplotypeScore=75.8183;InbreedingCoeff=0.9791;MQ=76.33;MQ0=0;MQRankSum=-1.170;QD=27.44;ReadPosRankSum=1.225;VQSLOD=3.9288;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,141,2171	0/0:6,0:6:18.06:0,18,286	0/0:22,0:24:33.12:0,33,536	0/0:12,0:12:24.08:0,24,342	0/0:22,0:22:54.18:0,54,844	0/0:24,0:25:72.24:0,72,1124	0/0:18,0:19:51.11:0,51,734	0/0:24,0:25:47.97:0,48,893	0/0:19,0:19:57.16:0,57,837	0/0:15,0:15:36.12:0,36,571	0/0:12,0:12:33.11:0,33,524	0/0:12,0:12:30.10:0,30,473	0/0:20,0:21:54.18:0,54,858	0/0:16,0:17:47.64:0,48,699	0/0:9,0:9:24.08:0,24,374	0/0:19,0:19:51.17:0,51,810	1/1:1,26:27:75.20:836,75,0	0/0:14,0:15:38.62:0,39,580	0/0:27,0:27:60.20:0,60,948	0/0:23,0:24:56.67:0,57,841	0/0:22,0:22:51.17:0,51,809	0/0:23,0:23:60.15:0,60,904	0/0:21,0:22:53.64:0,54,774	0/0:27,0:27:78.27:0,78,1237	0/0:14,0:14:42.13:0,42,644	0/0:29,0:30:74.73:0,75,1130	0/0:26,0:26:75.26:0,75,1185	0/0:7,0:7:18.05:0,18,259
chr10	93366267	.	GC	G	492.13	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.038;DP=541;FS=1.042;HRun=1;HaplotypeScore=62.7748;InbreedingCoeff=0.9806;MQ=75.95;MQ0=0;MQRankSum=-3.431;QD=35.15;ReadPosRankSum=2.235;VQSLOD=3.7319;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1566	0/0:5,0:5:15.05:0,15,239	0/0:24,0:21:63.21:0,63,1007	0/0:23,1:22:64.54:0,65,881	0/0:20,0:20:60.20:0,60,949	0/0:15,0:15:45.13:0,45,694	0/0:24,0:24:69.22:0,69,1076	0/0:29,0:29:87.28:0,87,1348	0/0:17,0:17:51.15:0,51,786	0/0:14,0:14:42.14:0,42,670	0/0:19,0:19:57.19:0,57,904	0/0:13,0:13:39.12:0,39,599	0/0:20,0:20:60.18:0,60,929	0/0:23,0:23:69.24:0,69,1097	0/0:18,0:18:54.15:0,54,816	0/0:19,0:19:54.17:0,54,840	0/0:38,0:38:99:0,114,1816	0/0:17,0:17:51.15:0,51,790	0/0:9,0:9:27.09:0,27,427	0/0:11,0:11:30.10:0,30,479	0/0:35,0:35:99:0,105,1670	0/0:22,0:22:66.21:0,66,1029	0/0:8,0:8:24.08:0,24,383	0/0:21,0:21:63.21:0,63,1007	0/0:13,0:13:39.13:0,39,621	0/0:11,0:11:33.11:0,33,520	0/0:23,0:22:69.24:0,69,1096	1/1:0,14:14:42.14:587,42,0
chr10	93366804	.	GAAGA	G	5519.22	PASS	AB=1.000;AC=28;AF=0.560;AN=50;BaseQRankSum=-10.182;DP=440;FS=5.027;HRun=0;HaplotypeScore=106.3959;InbreedingCoeff=0.5893;MQ=50.33;MQ0=11;MQRankSum=5.570;QD=17.86;ReadPosRankSum=-2.582;VQSLOD=3.6656;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:22:39.60:50,0,40	0/0:4,0:4:2.87:0,3,15	./.	./.	1/1:21,4:24:39.11:554,39,0	0/0:20,0:20:13.16:0,13,38	0/1:15,0:11:8.13:10,0,8	1/1:31,0:22:17.93:181,18,0	1/1:15,0:15:30.08:451,30,0	1/1:5,16:21:42.12:632,42,0	1/1:13,1:14:33.10:484,33,0	0/0:8,0:7:8.98:0,9,82	0/0:9,0:9:11.81:0,12,90	0/0:14,0:14:24.12:0,24,262	0/1:12,0:11:17.98:18,0,29	1/1:1,10:11:3.01:48,3,0	0/1:18,0:17:12.87:19,0,13	1/1:7,19:26:18.06:290,18,0	1/1:9,14:19:42.04:581,42,0	1/1:18,1:19:37.11:572,37,0	1/1:5,0:5:9.03:143,9,0	0/0:12,0:10:5.99:0,6,118	0/0:19,0:19:11.89:0,12,189	0/0:22,0:21:29.54:0,30,344	0/0:18,0:18:19.21:0,19,216	1/1:23,0:22:45.15:697,45,0	1/1:23,3:26:51.17:789,51,0	./.
chr10	93366831	.	GAA	G	1976.72	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=-2.547;DP=458;FS=2.519;HRun=3;HaplotypeScore=111.8989;InbreedingCoeff=0.3362;MQ=48.58;MQ0=12;MQRankSum=3.339;QD=7.35;ReadPosRankSum=3.871;VQSLOD=0.6010;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:19:16.42:360,16,0	1/1:4,0:4:6.02:70,6,0	0/0:10,0:1:2.96:0,3,19	0/0:13,0:4:0.33:0,0,2	0/1:22,0:21:47.94:123,0,48	1/1:1,16:17:27.09:407,27,0	1/1:5,8:8:15.05:203,15,0	0/0:29,0:25:17.05:0,17,611	1/1:11,0:11:24.83:100,25,0	0/1:20,0:20:99:112,0,110	0/1:18,0:18:92.05:92,0,187	0/0:9,0:7:20.68:0,21,140	0/0:9,0:9:9.35:0,9,95	0/0:16,0:16:18.66:0,19,224	1/1:10,0:9:5.71:85,6,0	0/0:17,0:17:8.88:0,9,183	1/1:16,0:15:15.91:156,16,0	0/1:28,0:28:16.66:17,0,254	0/1:21,0:17:71.98:108,0,72	0/1:23,0:22:70.91:71,0,299	1/1:4,0:4:7.36:26,7,0	0/0:13,0:11:22.11:0,22,281	0/0:26,0:26:45.39:0,45,510	0/0:19,0:18:38.13:0,38,385	0/0:27,0:27:60.36:0,60,479	1/1:17,0:17:2.74:124,3,0	0/1:24,0:24:15.92:110,0,16	0/0:1,0:1:2.98:0,3,21
chr10	93366833	.	A	AG	121.33	PASS	AB=0.836;AC=9;AF=0.161;AN=56;BaseQRankSum=6.316;DP=468;FS=22.339;HRun=0;HaplotypeScore=119.5201;InbreedingCoeff=0.4144;MQ=48.36;MQ0=12;MQRankSum=-6.892;QD=1.25;ReadPosRankSum=-0.047;VQSLOD=0.9582;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,6:17:11.63:84,0,12	1/1:3,1:4:5.63:29,6,0	0/0:11,0:1:2.96:0,3,19	0/1:14,0:4:0.25:0,0,0	0/0:22,0:21:46.88:0,47,326	0/1:17,0:18:1.18:1,0,5	1/1:13,0:10:6.65:28,7,0	0/0:30,0:25:68.90:0,69,835	0/0:12,0:12:29.05:0,29,163	0/0:22,0:22:58.61:0,59,445	0/0:18,0:18:50.11:0,50,440	0/0:10,0:8:13.96:0,14,137	0/0:9,0:9:14.89:0,15,130	0/0:17,0:17:35.18:0,35,326	0/1:5,4:8:3.28:45,0,3	0/0:17,0:17:17.95:0,18,224	0/1:13,5:17:22.35:60,0,22	0/0:29,0:29:41.46:0,41,407	0/0:22,0:18:49.85:0,50,386	0/0:24,0:23:64.98:0,65,604	0/0:4,0:4:8.79:0,9,53	0/0:12,0:11:30.99:0,31,223	0/0:26,0:26:59.99:0,60,414	0/0:16,0:15:40.27:0,40,341	0/0:26,0:26:52.11:0,52,441	0/0:18,0:18:45.12:0,45,297	0/0:24,0:24:55.49:0,55,351	0/0:1,0:1:2.98:0,3,21
chr10	93366854	.	AAGG	A	1243.13	PASS	AB=0.911;AC=12;AF=0.214;AN=56;BaseQRankSum=5.411;DP=479;FS=15.093;HRun=0;HaplotypeScore=133.4083;InbreedingCoeff=-0.3093;MQ=48.17;MQ0=12;MQRankSum=-5.181;QD=7.44;ReadPosRankSum=-5.707;VQSLOD=-0.0707;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:13:60.53:61,0,390	0/1:6,0:6:77.84:78,0,142	0/0:21,0:1:3.01:0,3,54	0/0:17,0:4:5.81:0,6,69	0/0:17,0:16:29.79:0,30,523	0/0:11,0:11:5.25:0,5,222	0/1:15,0:14:83.32:83,0,174	0/0:31,0:26:51.71:0,52,1278	0/0:11,0:11:27.08:0,27,476	0/0:25,0:24:66.12:0,66,1309	0/0:18,0:18:24.14:0,24,695	0/1:8,1:7:68.55:69,0,111	0/1:8,0:8:17.45:17,0,35	0/0:13,0:13:20.73:0,21,322	0/1:12,0:11:99:196,0,111	0/0:17,0:17:23.82:0,24,408	0/1:11,2:13:79.62:80,0,87	0/0:32,0:32:54.90:0,55,1141	0/0:17,0:16:48.16:0,48,979	0/0:20,3:22:30.69:0,31,953	0/0:8,0:8:9.03:0,9,178	0/1:11,7:17:99:187,0,448	0/1:18,9:27:99:163,0,687	0/1:13,1:14:95.10:95,0,277	0/1:16,7:23:99:227,0,648	0/0:23,0:22:2.72:0,3,928	0/0:28,0:28:57.20:0,57,1056	0/1:7,0:7:33.55:137,0,34
chr10	93366857	.	G	GAAGA	5210.05	PASS	AB=0.988;AC=45;AF=0.833;AN=54;BaseQRankSum=-0.215;DP=489;FS=2.493;HRun=0;HaplotypeScore=129.0779;InbreedingCoeff=0.5159;MQ=48.77;MQ0=12;MQRankSum=-0.664;QD=12.77;ReadPosRankSum=-1.044;VQSLOD=4.6107;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:14:3.70:11,0,4	1/1:6,0:6:5.55:26,6,0	./.	0/1:17,0:4:0:0,0,0	1/1:8,0:17:14.92:124,15,0	1/1:10,0:10:8.94:88,9,0	1/1:15,0:14:11.94:100,12,0	1/1:33,0:28:9.39:63,9,0	1/1:7,7:14:6.02:141,6,0	0/1:26,1:26:99:166,0,332	1/1:6,13:21:36.08:790,36,0	1/1:9,0:7:12:119,12,0	1/1:2,0:9:3.01:52,3,0	1/1:7,0:12:6.02:100,6,0	1/1:12,0:11:3.13:46,3,0	1/1:14,2:16:20.94:323,21,0	0/0:5,0:13:13.09:0,13,80	0/0:31,0:31:36.12:0,36,545	0/0:17,0:16:14.72:0,15,197	1/1:13,8:20:39.13:882,39,0	1/1:2,6:8:3.01:71,3,0	1/1:18,0:17:22.85:202,23,0	1/1:26,0:26:20.81:234,21,0	1/1:15,0:16:17.86:178,18,0	1/1:22,0:22:27.07:238,27,0	1/1:12,12:24:39.10:820,39,0	1/1:15,15:30:15.05:353,15,0	1/1:8,0:8:12.22:81,12,0
chr10	93366870	.	AAG	A	222.39	PASS	AB=0.840;AC=5;AF=0.093;AN=54;BaseQRankSum=4.518;DP=485;FS=0.000;HRun=0;HaplotypeScore=125.6195;InbreedingCoeff=-0.0330;MQ=50.79;MQ0=12;MQRankSum=-5.329;QD=4.28;ReadPosRankSum=-0.569;VQSLOD=2.4546;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,6:11:5.79:214,0,6	0/1:4,1:5:24.73:25,0,55	./.	0/0:19,0:3:6.02:0,6,79	0/0:22,0:22:51.17:0,51,819	0/0:12,0:12:21.07:0,21,358	0/0:14,0:13:30.10:0,30,460	0/0:34,0:26:70.48:0,70,1061	0/0:15,0:15:27.09:0,27,384	0/0:25,0:24:66.22:0,66,1063	0/0:22,0:22:63.19:0,63,880	0/0:11,0:9:24.08:0,24,385	0/0:11,0:11:12.04:0,12,154	0/0:13,0:13:27.05:0,27,335	0/1:7,3:9:48.85:49,0,118	0/0:15,0:15:24.08:0,24,371	0/1:12,0:12:9.14:9,0,76	0/0:29,0:29:50.96:0,51,942	0/0:17,0:15:45.15:0,45,718	0/0:19,0:18:54.16:0,54,722	0/0:8,0:8:5.05:0,5,93	0/0:15,0:14:36.12:0,36,610	0/0:25,0:25:57.17:0,57,843	0/0:16,0:16:42.02:0,42,700	0/0:23,0:23:60.20:0,60,967	0/0:26,0:25:72.23:0,72,1012	0/0:30,0:30:54.18:0,54,805	0/1:8,1:13:39.31:39,0,155
chr10	93366880	.	GA	G	752.05	PASS	AB=0.950;AC=10;AF=0.179;AN=56;BaseQRankSum=7.740;DP=487;FS=0.691;HRun=3;HaplotypeScore=104.1821;InbreedingCoeff=0.8296;MQ=50.99;MQ0=13;MQRankSum=-6.567;QD=12.75;ReadPosRankSum=2.022;VQSLOD=2.2523;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,3:9:14.95:142,15,0	1/1:1,3:4:11.99:115,12,0	0/1:14,0:3:0:1,0,0	0/0:22,0:5:7.09:0,7,83	0/0:22,0:22:51.17:0,51,702	0/0:15,0:15:33.10:0,33,440	0/0:12,0:11:24.08:0,24,339	0/0:37,0:28:81.24:0,81,1092	0/0:16,0:16:29.98:0,30,380	0/0:22,0:21:60.17:0,60,804	0/0:23,0:23:63.08:0,63,697	0/0:11,0:9:24.08:0,24,348	0/0:13,0:13:21.04:0,21,252	0/0:12,0:12:24.06:0,24,301	1/1:5,6:10:26.97:276,27,0	0/0:17,0:17:33.08:0,33,396	0/0:11,0:11:13.02:0,13,105	0/0:28,0:28:46.62:0,47,828	0/0:22,0:19:57.17:0,57,763	0/0:20,0:19:57.02:0,57,570	0/1:8,1:9:4.03:4,0,81	0/0:12,0:12:36.12:0,36,504	0/0:24,0:24:51.14:0,51,662	0/0:17,0:17:42.14:0,42,582	0/0:20,0:20:54.18:0,54,778	0/0:25,0:24:69.10:0,69,771	0/0:26,0:26:48.08:0,48,586	1/1:4,8:12:35.97:371,36,0
chr10	93366881	.	A	AAAG	1891.18	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=8.681;DP=490;FS=3.322;HRun=0;HaplotypeScore=112.3838;InbreedingCoeff=0.1338;MQ=50.95;MQ0=13;MQRankSum=-2.283;QD=8.05;ReadPosRankSum=10.063;VQSLOD=1.6331;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:6,3:9:14.69:135,15,0	1/1:4,0:4:12.04:155,12,0	0/1:15,0:3:0:0,0,0	0/0:23,0:5:6.87:0,7,86	0/0:22,0:22:35.01:0,35,521	0/0:16,0:16:21.69:0,22,342	0/0:12,0:11:23.43:0,23,239	0/0:36,0:27:77.22:0,77,1001	0/1:16,0:16:28.12:28,0,251	0/1:23,0:22:15.67:16,0,670	0/1:22,0:22:99:232,0,339	0/0:11,0:9:6.03:0,6,180	0/1:13,0:13:6.20:6,0,214	0/1:12,0:12:17.24:17,0,190	1/1:10,1:10:26.83:322,27,0	0/1:16,0:16:78.39:78,0,169	0/0:11,0:11:24.04:0,24,258	0/0:28,0:28:46.61:0,47,899	0/0:22,0:19:48.15:0,48,686	0/1:20,0:19:99:274,0,162	0/1:10,0:10:36.69:37,0,55	0/0:12,0:12:19.06:0,19,287	0/0:24,0:24:1.46:0,1,243	0/0:17,0:17:36.44:0,36,399	0/0:21,0:21:39.38:0,39,452	0/1:25,0:24:99:228,0,375	0/1:27,0:27:88.73:89,0,414	1/1:12,0:12:36.10:448,36,0
chr10	93366885	.	A	AAGG	1538.67	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=8.493;DP=499;FS=0.000;HRun=0;HaplotypeScore=115.6913;InbreedingCoeff=0.5150;MQ=53.16;MQ0=13;MQRankSum=-2.808;QD=10.19;ReadPosRankSum=8.694;VQSLOD=2.4971;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,1:9:15.05:225,15,0	1/1:4,0:4:12.04:230,12,0	0/1:16,0:4:0:0,0,0	0/1:26,0:6:8.97:9,0,82	0/0:22,0:22:50.33:0,50,705	0/0:16,0:16:37.92:0,38,542	0/0:12,0:11:24.07:0,24,358	0/0:37,0:29:77.29:0,77,1280	0/0:16,0:16:17.82:0,18,356	0/0:24,0:23:53.35:0,53,873	0/1:24,0:24:21.25:21,0,480	0/0:11,0:9:22.88:0,23,259	0/0:13,0:13:9.25:0,9,297	0/0:12,0:12:8.28:0,8,256	1/1:13,1:13:32.78:489,33,0	0/0:15,0:15:5.08:0,5,269	0/0:11,0:11:23.98:0,24,244	0/0:29,0:29:67.08:0,67,1103	0/0:19,0:16:48.15:0,48,808	0/1:19,0:18:24.15:24,0,246	0/0:11,0:11:5.20:0,5,141	0/0:13,0:13:36.08:0,36,465	0/0:21,0:21:34.70:0,35,407	0/0:17,0:17:43.55:0,44,531	0/0:21,0:21:56.29:0,56,680	0/1:27,0:26:9.37:9,0,531	0/0:28,0:28:16.76:0,17,568	1/1:8,4:12:36.12:698,36,0
chr10	93366898	.	A	AAG	1088.64	PASS	AB=0.919;AC=15;AF=0.268;AN=56;BaseQRankSum=8.210;DP=511;FS=1.511;HRun=0;HaplotypeScore=106.6029;InbreedingCoeff=-0.3578;MQ=55.24;MQ0=10;MQRankSum=-1.319;QD=4.25;ReadPosRankSum=0.847;VQSLOD=2.8313;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:18.05:0,18,250	0/0:4,0:4:9.01:0,9,126	0/0:29,0:12:20.93:0,21,271	0/0:28,0:8:20.08:0,20,222	0/0:24,0:24:2.74:0,3,644	0/1:13,2:16:99:111,0,395	0/1:10,3:12:32.86:33,0,181	0/0:37,0:31:85.48:0,85,1197	0/1:15,0:15:4.31:4,0,292	0/0:22,0:21:12.91:0,13,729	0/1:24,0:24:99:104,0,383	0/1:10,2:11:88.02:88,0,173	0/0:15,0:15:6.99:0,7,345	0/1:12,0:12:1.83:2,0,293	0/0:13,0:13:36.12:0,36,536	0/1:9,5:14:99:231,0,193	0/0:8,1:9:16.87:0,17,124	0/0:28,0:28:69.18:0,69,1052	0/0:22,0:20:60.20:0,60,896	0/1:20,0:19:99:147,0,218	0/1:12,0:12:3.62:4,0,125	0/1:10,1:11:30.96:31,0,292	0/1:16,2:18:43.53:44,0,256	0/1:15,3:18:48.07:48,0,374	0/1:18,2:20:99:268,0,332	0/1:27,0:26:93.19:93,0,515	0/1:23,0:23:30.12:30,0,434	0/0:14,0:14:42.14:0,42,593
chr10	93367070	.	A	ACACACACACACG	4629.94	PASS	AB=0.778;AC=27;AF=0.482;AN=56;BaseQRankSum=-2.956;DP=543;FS=20.895;HRun=0;HaplotypeScore=183.8368;InbreedingCoeff=0.8337;MQ=63.28;MQ0=8;MQRankSum=-5.192;QD=20.76;ReadPosRankSum=0.389;VQSLOD=2.7497;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:23:17.87:266,18,0	1/1:9,0:9:5.96:105,6,0	0/0:23,0:12:23.22:0,23,268	0/0:26,0:19:41.82:0,42,383	0/0:29,0:28:68.22:0,68,1182	1/1:12,0:13:26.58:334,27,0	1/1:16,0:20:31.62:406,32,0	0/0:33,0:32:62.01:0,62,945	0/0:20,0:20:60.08:0,60,1516	0/0:24,0:24:68.73:0,69,1089	0/0:19,0:19:56.94:0,57,923	1/1:1,7:12:14.90:811,15,0	1/1:0,10:15:12.51:537,13,0	1/1:9,0:9:10.49:113,10,0	0/1:10,0:14:5.92:225,0,6	0/0:21,0:21:53.98:0,54,1228	1/1:1,0:22:11.25:278,11,0	0/0:18,0:18:18.72:0,19,892	0/0:21,0:18:54.05:0,54,782	0/0:20,0:20:51.06:0,51,1154	0/0:19,0:18:29.52:0,30,508	1/1:0,9:14:2.63:154,3,0	1/1:0,15:23:6.49:337,6,0	1/1:1,11:24:9.03:390,9,0	1/1:0,13:19:12.04:660,12,0	0/0:25,0:25:63.58:0,64,1080	0/0:22,0:21:44.89:0,45,1167	1/1:6,0:5:2.87:15,3,0
chr10	93367114	.	AAAAAACTAAAACT	A	2814.69	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.525;DP=515;FS=0.000;HRun=0;HaplotypeScore=169.7054;InbreedingCoeff=0.9572;MQ=61.01;MQ0=2;MQRankSum=-7.895;QD=56.29;ReadPosRankSum=2.141;VQSLOD=3.0051;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:30.10:1028,30,0	1/1:0,12:12:30.10:1162,30,0	0/0:19,0:13:28.45:0,28,746	0/0:22,0:17:38.50:0,39,967	0/0:23,0:23:54.10:0,54,2931	0/0:13,0:13:36.12:0,36,2158	0/0:21,0:21:63.22:0,63,3217	0/0:33,0:33:93.26:0,93,3663	0/0:19,0:19:48.16:0,48,2621	0/0:25,0:25:75.26:0,75,4059	0/0:25,0:25:69.24:0,69,3803	0/0:9,0:9:8.61:0,9,538	0/0:16,0:16:27.09:0,27,1647	0/0:16,0:16:36.08:0,36,1639	1/1:2,14:16:21.07:767,21,0	0/0:15,0:15:42.14:0,42,2235	0/0:25,0:25:48.16:0,48,2735	0/0:10,0:10:24.07:0,24,1172	0/0:16,0:16:48.16:0,48,2431	0/0:18,0:18:51.16:0,51,2868	0/0:15,0:15:42.14:0,42,2486	0/0:11,0:11:24.08:0,24,1409	0/0:20,0:20:30.57:0,31,1334	0/0:29,0:28:42.14:0,42,2563	0/0:22,0:22:36.12:0,36,1930	0/0:20,0:20:57.20:0,57,3306	0/0:14,0:13:27.09:0,27,1466	0/0:0,0:9:10.01:0,10,34
chr10	93367314	.	C	CAGAG	1462.36	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.479;DP=597;FS=14.061;HRun=0;HaplotypeScore=123.2707;InbreedingCoeff=0.8430;MQ=61.37;MQ0=7;MQRankSum=-5.665;QD=26.59;ReadPosRankSum=-2.066;VQSLOD=2.5091;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:35:45.02:881,45,0	1/1:1,2:3:6.02:136,6,0	0/0:33,0:17:22.24:0,22,308	0/0:52,0:21:24.81:0,25,386	0/0:25,0:26:78.18:0,78,1235	0/0:18,0:18:41.29:0,41,570	0/0:30,0:30:42.32:0,42,820	0/0:34,0:31:66.22:0,66,1118	0/0:18,0:18:35.99:0,36,555	0/0:18,0:18:45.14:0,45,722	0/0:24,0:24:45.02:0,45,706	0/0:11,0:11:10.13:0,10,322	0/0:19,0:19:3.90:0,4,625	0/0:27,0:25:31.20:0,31,783	1/1:6,7:13:24.08:543,24,0	0/0:18,0:18:42.08:0,42,641	0/0:23,0:23:17.70:0,18,451	0/0:15,0:15:0.70:0,1,483	0/0:17,0:16:30.06:0,30,438	0/0:18,0:18:36.09:0,36,566	0/0:24,0:23:53.71:0,54,808	0/0:14,0:14:30.10:0,30,518	0/0:16,0:16:42.13:0,42,699	0/0:23,0:21:48.15:0,48,802	0/0:13,0:13:39.12:0,39,649	0/0:24,0:24:41.69:0,42,885	0/0:24,0:25:44.18:0,44,1015	1/1:0,0:4:11.19:51,11,0
chr10	93367346	.	GAC	G	593.30	PASS	AB=0.974;AC=17;AF=0.304;AN=56;BaseQRankSum=7.292;DP=492;FS=15.680;HRun=0;HaplotypeScore=97.6094;InbreedingCoeff=0.1179;MQ=46.37;MQ0=12;MQRankSum=3.867;QD=2.79;ReadPosRankSum=-3.057;VQSLOD=0.4164;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,1:29:17.08:18,0,17	1/1:2,0:2:2.22:7,2,0	0/0:13,0:1:2.96:0,3,19	0/0:25,0:7:9:0,9,105	0/0:24,0:24:29.18:0,29,857	1/1:15,0:15:11.14:98,11,0	1/1:22,0:22:39.42:328,39,0	0/0:36,0:28:64.04:0,64,1125	0/1:13,1:14:17.77:18,0,429	0/1:13,0:13:21.79:22,0,444	0/0:21,0:20:28.80:0,29,514	0/1:9,1:9:25.07:25,0,190	0/0:13,0:13:13.07:0,13,462	0/0:17,6:21:33.11:0,33,614	0/1:12,0:12:18.96:19,0,19	0/0:16,0:16:27.95:0,28,445	0/0:15,12:26:19.03:0,19,583	0/1:15,0:14:19.36:19,0,449	0/0:14,0:14:18.42:0,18,512	0/0:14,0:13:18:0,18,266	0/1:28,0:26:9.50:9,0,524	0/0:9,0:9:18.03:0,18,261	0/0:12,0:12:7.09:0,7,390	0/1:21,1:20:77.76:78,0,518	0/0:11,0:11:4.11:0,4,326	0/1:26,0:25:89.77:90,0,770	0/0:19,0:19:12.58:0,13,615	1/1:4,0:4:5.60:30,6,0
chr10	93367354	.	GAC	G	775.53	PASS	AB=0.994;AC=23;AF=0.426;AN=54;BaseQRankSum=6.316;DP=435;FS=28.111;HRun=0;HaplotypeScore=92.0891;InbreedingCoeff=-0.1537;MQ=45.51;MQ0=12;MQRankSum=0.663;QD=2.64;ReadPosRankSum=-2.608;VQSLOD=-0.0608;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:23:0.07:1,0,0	1/1:2,1:3:3.01:45,3,0	./.	0/0:17,0:1:2.97:0,3,20	0/0:21,0:21:24.74:0,25,316	1/1:13,0:13:8.14:72,8,0	1/1:21,0:21:36.31:284,36,0	0/1:32,0:25:28.16:28,0,277	0/1:15,1:16:37.35:37,0,178	0/1:12,0:12:42.52:43,0,213	0/0:18,1:18:23.61:0,24,194	0/1:11,0:9:52.94:53,0,58	0/1:13,0:13:6.67:7,0,153	0/0:23,0:21:29.91:0,30,240	1/1:11,0:11:1.73:23,2,0	0/0:16,0:16:21.39:0,21,196	0/1:25,1:25:15.02:15,0,207	0/1:15,0:14:29.12:29,0,182	0/0:11,0:11:6:0,6,194	0/0:12,0:11:11.93:0,12,89	0/1:27,0:25:34.06:34,0,183	0/1:8,0:8:14.98:15,0,39	0/1:10,0:10:24.96:25,0,115	0/1:20,0:18:91.63:92,0,152	0/1:8,0:8:10.92:11,0,103	0/1:23,0:22:99:118,0,328	0/0:17,0:17:2.52:0,3,270	0/1:1,0:1:0:0,0,0
chr10	93371228	.	GGGAA	G	4343.64	PASS	AB=0.883;AC=16;AF=0.286;AN=56;BaseQRankSum=12.425;DP=722;FS=24.707;HRun=0;HaplotypeScore=189.4462;InbreedingCoeff=0.0843;MQ=50.23;MQ0=3;MQRankSum=-10.339;QD=12.41;ReadPosRankSum=-3.184;VQSLOD=2.1200;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,1:25:1.27:315,1,0	0/1:9,0:9:7.54:93,0,8	0/0:26,0:11:20.91:0,21,223	0/0:27,0:16:12.58:0,13,163	0/0:19,0:19:51.16:0,51,1194	0/1:20,5:25:57.98:557,0,58	1/1:36,4:40:31.34:598,31,0	0/0:19,0:19:36.08:0,36,618	0/0:32,0:32:93.29:0,93,2166	0/0:25,0:25:60.20:0,60,1423	0/0:19,0:19:51.13:0,51,1117	0/1:24,3:27:99:304,0,155	0/1:29,1:30:99:506,0,102	0/1:31,0:31:99:281,0,134	0/1:36,0:35:87.13:414,0,87	0/0:26,0:26:69.19:0,69,1415	0/0:34,0:34:77.31:0,77,1744	0/0:17,0:17:42.12:0,42,922	0/0:23,0:23:57.14:0,57,1054	0/0:21,0:21:63.15:0,63,1298	0/0:42,0:41:99:0,117,2662	0/1:11,12:23:89.87:106,0,90	1/1:25,2:26:10.80:378,11,0	0/1:37,1:37:77.18:251,0,77	0/1:27,4:31:91.35:471,0,91	0/0:21,0:20:45.14:0,45,1028	0/0:21,0:20:45.15:0,45,1150	0/1:3,5:8:12.97:70,0,13
chr10	93374442	.	G	GT	1801.13	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-2.081;DP=365;FS=14.758;HRun=7;HaplotypeScore=38.8715;InbreedingCoeff=0.8977;MQ=65.47;MQ0=2;MQRankSum=1.628;QD=24.67;ReadPosRankSum=0.653;VQSLOD=2.3338;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:54.08:0,54,520	0/0:6,0:6:17.97:0,18,158	0/1:3,0:3:3.03:3,0,28	0/0:10,0:8:13.33:0,13,131	0/0:15,0:15:42.07:0,42,405	0/0:17,0:17:42.06:0,42,406	0/0:12,0:12:33.05:0,33,319	0/0:18,0:18:48.08:0,48,463	0/0:7,0:7:18.03:0,18,174	0/0:12,0:12:27.03:0,27,260	0/0:15,0:15:39.06:0,39,375	1/1:2,3:5:6.02:72,6,0	1/1:1,3:4:9.03:109,9,0	1/1:2,8:9:21.06:254,21,0	0/0:6,0:6:18.03:0,18,174	0/0:7,0:7:21.03:0,21,203	0/0:23,0:23:59.81:0,60,567	0/0:24,0:25:65.11:0,65,607	0/0:11,0:11:27.03:0,27,257	0/0:14,0:14:36.05:0,36,347	0/0:13,0:13:30.04:0,30,289	1/1:0,13:13:39.12:467,39,0	1/1:0,10:10:30.09:362,30,0	1/1:2,17:19:36.11:435,36,0	1/1:0,9:9:24.07:290,24,0	0/0:26,0:26:72.12:0,72,695	0/0:17,0:17:48.07:0,48,461	0/0:16,0:16:33.02:0,33,313
chr10	93374582	.	T	TTTA	298.54	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.131;DP=280;FS=1.463;HRun=0;HaplotypeScore=42.3741;InbreedingCoeff=0.5818;MQ=65.56;MQ0=5;MQRankSum=-2.046;QD=22.96;ReadPosRankSum=1.357;VQSLOD=3.4456;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.58:0,43,528	0/0:6,0:6:15.03:0,15,171	0/0:13,0:5:8.14:0,8,144	0/0:6,0:4:6.68:0,7,27	0/0:12,0:12:27.07:0,27,396	0/0:18,0:18:54.09:0,54,811	0/0:4,0:4:9.02:0,9,122	0/0:26,0:25:72.21:0,72,1083	0/0:5,0:5:14.99:0,15,180	0/0:8,0:8:24.08:0,24,409	0/0:10,0:10:24.08:0,24,390	0/0:3,0:3:9.03:0,9,147	0/0:6,0:6:15.04:0,15,231	0/0:7,0:7:21.06:0,21,317	0/0:6,0:6:18.02:0,18,181	0/0:6,0:6:18.06:0,18,291	0/0:16,0:16:48.09:0,48,728	0/0:23,0:23:66.22:0,66,1090	0/0:18,0:17:51.16:0,51,814	0/0:5,0:5:15.05:0,15,255	0/0:3,0:3:9.03:0,9,153	0/0:1,0:1:3.01:0,3,51	0/0:4,0:4:12.03:0,12,165	0/0:4,0:4:12.04:0,12,205	0/0:9,0:9:27.09:0,27,460	0/0:18,0:18:54.18:0,54,890	0/0:15,0:15:45.15:0,45,742	1/1:4,9:13:18.06:389,18,0
chr10	93374591	.	A	AT	1175.95	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=4.378;DP=270;FS=8.507;HRun=7;HaplotypeScore=27.6596;InbreedingCoeff=0.7446;MQ=65.01;MQ0=7;MQRankSum=-0.867;QD=16.80;ReadPosRankSum=-0.223;VQSLOD=1.9624;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:15:40.11:268,40,0	1/1:8,0:8:20.89:175,21,0	0/1:13,0:5:5.97:6,0,20	0/0:5,0:3:1.79:0,2,25	0/0:10,0:10:24.04:0,24,231	1/1:1,15:16:45.14:543,45,0	1/1:0,3:3:9.03:107,9,0	0/0:27,0:25:69.06:0,69,655	0/0:4,0:4:9.01:0,9,87	0/0:9,0:9:26.99:0,27,251	0/0:11,0:11:23.99:0,24,222	0/0:4,0:4:9:0,9,81	0/0:5,0:5:9.01:0,9,87	0/0:5,0:5:12.02:0,12,116	1/1:4,0:4:8.97:74,9,0	0/0:7,0:6:15.02:0,15,145	0/0:15,0:14:33.04:0,33,319	0/0:22,0:22:54.08:0,54,521	0/0:19,0:17:48.08:0,48,463	0/0:5,0:5:12.01:0,12,116	0/0:3,0:3:9.01:0,9,87	0/0:2,0:1:3:0,3,29	0/0:3,0:3:6.01:0,6,58	0/0:4,0:4:9.01:0,9,87	0/0:10,0:10:24.04:0,24,231	0/0:18,0:18:54.09:0,54,521	0/0:12,0:12:30.04:0,30,285	1/1:5,5:10:15.05:180,15,0
chr10	93375009	.	A	AGT	3742.72	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=12.277;DP=623;FS=22.446;HRun=0;HaplotypeScore=88.4301;InbreedingCoeff=0.9973;MQ=68.58;MQ0=0;MQRankSum=0.768;QD=31.45;ReadPosRankSum=3.887;VQSLOD=3.1842;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1752	0/0:7,0:7:21.07:0,21,332	0/0:21,0:20:33.13:0,33,583	0/0:12,0:11:20.13:0,20,336	0/0:24,0:24:63.21:0,63,1016	0/0:33,0:33:93.28:0,93,1461	0/0:24,0:24:67.10:0,67,1054	0/0:42,0:42:99:0,123,1952	0/0:24,0:24:72.25:0,72,1174	0/0:35,0:35:99:0,102,1617	0/0:30,0:30:81.27:0,81,1294	1/1:1,11:14:22.80:331,23,0	1/1:1,14:17:34.30:500,34,0	1/1:3,17:21:44.41:647,44,0	0/0:32,0:32:93.29:0,93,1461	0/0:18,0:18:51.17:0,51,830	./.	0/0:22,0:22:63.20:0,63,982	0/0:37,0:37:99:0,105,1707	0/0:17,0:17:42.13:0,42,659	0/0:18,0:18:54.18:0,54,877	1/1:1,15:16:42.14:631,42,0	1/1:2,11:13:31.38:480,31,0	1/1:2,20:23:52.22:779,52,0	1/1:1,12:15:24.82:374,25,0	0/0:32,0:32:96.33:0,96,1563	0/0:28,0:28:84.29:0,84,1364	0/0:12,0:12:36.08:0,36,391
chr10	93375010	.	C	CT	1529.27	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=12.180;DP=621;FS=27.037;HRun=8;HaplotypeScore=83.5790;InbreedingCoeff=0.9721;MQ=67.52;MQ0=0;MQRankSum=-0.525;QD=11.59;ReadPosRankSum=3.810;VQSLOD=1.0863;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,896	0/0:7,0:7:15.01:0,15,137	0/0:21,0:20:28.15:0,28,309	0/0:9,0:8:4.18:0,4,88	0/0:24,0:24:65.76:0,66,569	0/0:34,0:34:90.03:0,90,818	0/0:24,0:24:65.97:0,66,587	0/0:42,0:42:99:0,111,996	0/0:24,0:24:72.02:0,72,654	0/0:34,0:34:84.02:0,84,762	0/0:30,0:30:74.88:0,75,652	1/1:13,0:13:22.90:116,23,0	1/1:16,0:16:34.50:194,34,0	1/1:21,0:21:45.42:243,45,0	0/0:32,0:32:84:0,84,760	0/0:18,0:18:51.01:0,51,462	./.	0/0:22,0:22:54.01:0,54,490	0/0:37,0:37:96:0,96,864	0/0:16,0:16:39.02:0,39,357	0/0:19,0:19:48:0,48,432	1/1:17,0:17:40.08:203,40,0	1/1:14,0:14:37.29:199,37,0	1/1:24,0:24:51.61:281,52,0	1/1:15,0:15:25.84:151,26,0	0/0:32,0:32:90.01:0,90,811	0/0:28,0:28:78.04:0,78,714	1/1:2,10:12:30.09:346,30,0
chr10	93375411	.	TGGTCAA	T	6923.34	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=13.399;DP=581;FS=0.845;HRun=0;HaplotypeScore=131.7958;InbreedingCoeff=0.9995;MQ=57.16;MQ0=2;MQRankSum=-14.520;QD=60.73;ReadPosRankSum=1.616;VQSLOD=5.3841;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,4233	0/0:13,0:13:39.10:0,39,1293	0/0:33,0:25:68.97:0,69,2232	0/0:27,0:24:63.22:0,63,1976	0/0:21,0:21:63.22:0,63,2155	0/0:10,0:10:27.09:0,27,905	0/0:24,0:24:66.23:0,66,2185	0/0:34,0:34:90.31:0,90,3179	0/0:17,0:17:48.16:0,48,1613	0/0:15,0:15:42.14:0,42,1465	0/0:18,0:18:45.15:0,45,1584	1/1:2,23:25:66.23:1527,66,0	1/1:2,13:15:42.14:968,42,0	1/1:3,10:13:33.11:754,33,0	0/0:22,0:22:63.22:0,63,2227	0/0:20,0:20:57.20:0,57,2033	./.	0/0:31,0:31:93.30:0,93,3147	0/0:26,0:26:69.23:0,69,2306	0/0:16,0:16:48.16:0,48,1703	0/0:26,0:26:69.24:0,69,2438	1/1:2,15:17:48.16:1130,48,0	1/1:0,14:14:42.14:989,42,0	1/1:2,18:20:39.22:918,39,0	1/1:0,10:10:27.09:637,27,0	0/0:20,0:20:57.20:0,57,1957	0/0:31,0:31:90.31:0,90,3098	0/0:18,0:18:48.16:0,48,1678
chr10	93375475	.	T	TTTTTGTTGCTAC	22868.32	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=-5.775;DP=691;FS=0.709;HRun=0;HaplotypeScore=237.9698;InbreedingCoeff=0.9999;MQ=75.59;MQ0=0;MQRankSum=-17.455;QD=114.92;ReadPosRankSum=-0.839;VQSLOD=4.5500;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,162,5557	0/0:17,0:17:51.17:0,51,1805	0/0:19,0:19:47.23:0,47,1369	0/0:24,0:24:47.11:0,47,1634	0/0:28,0:28:81.26:0,81,2961	0/0:14,0:14:42.14:0,42,1491	0/0:26,0:26:72.22:0,72,2504	0/0:39,0:39:99:0,108,3370	0/0:20,0:20:60.15:0,60,2045	0/0:24,0:24:69.23:0,69,2336	0/0:13,0:13:39.12:0,39,1347	1/1:21,13:34:93.23:4535,93,0	1/1:2,12:23:39.13:2397,39,0	1/1:6,14:25:60.16:3386,60,0	0/0:22,0:22:63.21:0,63,2181	0/0:13,0:13:39.13:0,39,1470	./.	0/0:27,0:27:75.22:0,75,2463	0/0:32,0:32:90.25:0,90,2695	0/0:33,0:33:93.32:0,93,3416	0/0:23,0:23:69.24:0,69,2551	1/1:6,14:27:60.16:3075,60,0	1/1:7,17:31:66.09:3404,66,0	1/1:11,4:15:33.05:1405,33,0	1/1:1,14:23:42.14:2594,42,0	0/0:25,0:25:69.24:0,69,2446	0/0:35,0:35:99:0,102,3623	1/1:10,7:21:36.12:2071,36,0
chr10	93375710	.	T	TA	2316.25	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=-0.437;DP=627;FS=0.000;HRun=8;HaplotypeScore=79.4742;InbreedingCoeff=0.9975;MQ=78.06;MQ0=0;MQRankSum=-1.459;QD=25.74;ReadPosRankSum=2.271;VQSLOD=4.2906;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,44:47:99:1350,117,0	1/1:2,11:13:30.09:346,30,0	0/0:16,0:16:27.96:0,28,269	0/0:14,0:14:21.67:0,22,218	0/0:35,0:35:90.01:0,90,819	0/0:30,0:30:80.99:0,81,733	0/0:23,0:23:60.03:0,60,549	0/0:25,0:25:60.02:0,60,549	0/0:23,0:23:63.03:0,63,576	0/0:20,0:20:57.02:0,57,521	0/0:25,0:25:66.03:0,66,604	0/0:18,0:18:54:0,54,484	0/0:17,0:17:41.97:0,42,371	0/0:19,0:19:54.03:0,54,494	1/1:2,28:30:66.04:762,66,0	0/0:15,0:15:39.02:0,39,357	./.	0/0:19,0:19:48.02:0,48,439	0/0:23,0:23:62.18:0,62,575	0/0:25,0:25:63.01:0,63,576	0/0:31,0:32:89.07:0,89,798	0/0:29,0:29:66.03:0,66,603	0/0:26,0:26:53.99:0,54,492	0/0:29,0:29:74.99:0,75,678	0/0:17,0:17:48.02:0,48,439	0/0:27,0:27:72.03:0,72,659	0/0:21,0:21:63.03:0,63,577	0/0:9,0:9:23.96:0,24,211
chr10	93376001	.	TCA	T	10102.65	PASS	AB=0.952;AC=27;AF=0.482;AN=56;BaseQRankSum=15.478;DP=843;FS=7.684;HRun=0;HaplotypeScore=134.2356;InbreedingCoeff=0.9303;MQ=67.70;MQ0=3;MQRankSum=-2.088;QD=24.94;ReadPosRankSum=3.263;VQSLOD=5.6335;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,47:50:99:1512,120,0	1/1:2,17:19:42.13:527,42,0	0/0:34,0:26:41.26:0,41,529	0/0:40,1:36:65.26:0,65,1152	0/0:22,0:22:54.12:0,54,811	1/1:5,24:29:66.21:819,66,0	1/1:6,29:35:78.72:982,79,0	0/0:31,0:31:69.21:0,69,1097	0/0:30,0:30:87.28:0,87,1419	0/0:36,0:36:93.30:0,93,1502	0/0:18,0:18:48.10:0,48,742	1/1:7,35:43:81.09:989,81,0	1/1:5,28:33:78.25:984,78,0	1/1:3,28:31:69.22:864,69,0	1/1:3,28:31:60.19:748,60,0	0/0:36,0:36:90.31:0,90,1490	0/1:19,1:20:13.97:14,0,324	0/0:31,0:31:81.28:0,81,1337	0/0:19,0:19:42.07:0,42,593	0/0:21,0:21:57.18:0,57,923	0/0:57,2:59:99:0,100,2123	1/1:2,27:29:72.23:909,72,0	1/1:5,11:16:21.07:265,21,0	1/1:5,34:38:69.22:868,69,0	1/1:3,17:20:29.86:365,30,0	0/0:32,0:32:78.22:0,78,1219	0/0:28,0:28:81.22:0,81,1254	1/1:2,6:9:23.74:255,24,0
chr10	93376146	.	GAC	G	655.76	PASS	AB=0.903;AC=6;AF=0.107;AN=56;BaseQRankSum=0.510;DP=885;FS=0.611;HRun=0;HaplotypeScore=212.5556;InbreedingCoeff=0.2081;MQ=60.82;MQ0=8;MQRankSum=4.562;QD=4.20;ReadPosRankSum=3.501;VQSLOD=2.7258;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:38.23:0,38,285	0/0:12,0:12:23.09:0,23,156	0/0:39,0:25:39.54:0,40,536	0/0:43,0:28:24.07:0,24,325	0/0:26,1:27:27.88:0,28,884	0/0:23,0:23:29.14:0,29,210	0/0:32,0:32:28.97:0,29,213	0/0:35,1:36:18.82:0,19,728	0/0:43,0:42:84.27:0,84,1300	0/0:34,0:35:60.20:0,60,927	0/0:20,0:20:39.13:0,39,615	0/0:32,0:32:60.83:0,61,438	0/0:22,0:22:34.53:0,35,242	0/0:43,0:42:73.22:0,73,556	0/0:37,0:37:73.74:0,74,557	0/1:38,4:42:48.03:48,0,1151	1/1:8,16:25:47.97:544,48,0	0/0:20,1:21:18.81:0,19,741	0/1:16,2:18:34.48:34,0,384	0/1:27,3:30:42.78:43,0,786	0/0:71,6:77:3.93:0,4,2358	0/0:19,0:19:27.82:0,28,167	0/0:24,0:24:40.19:0,40,270	0/0:36,0:36:28.75:0,29,180	0/0:27,0:27:52.39:0,52,396	0/1:36,5:41:99:116,0,929	0/0:24,2:26:3.75:0,4,494	0/0:16,0:16:35.35:0,35,325
chr10	93376163	.	A	ACACACACG	19102.99	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=3.132;DP=989;FS=5.867;HRun=0;HaplotypeScore=251.0435;InbreedingCoeff=0.9984;MQ=55.37;MQ0=8;MQRankSum=-18.477;QD=43.61;ReadPosRankSum=3.011;VQSLOD=3.9184;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:42:49.34:1057,49,0	1/1:3,0:15:24.07:396,24,0	0/0:48,0:28:65.89:0,66,1022	0/0:41,0:25:53.97:0,54,722	0/0:32,0:32:83.71:0,84,1657	1/1:8,18:30:33.11:1261,33,0	1/1:13,21:38:45.15:1772,45,0	0/0:37,0:37:63.37:0,63,1538	0/0:38,0:37:98.97:0,99,2183	0/0:35,0:35:93.19:0,93,1774	0/0:18,0:18:48.11:0,48,1047	1/1:5,37:49:66.23:2666,66,0	1/1:5,20:29:41.88:1604,42,0	1/1:8,35:50:69.24:2636,69,0	1/1:6,0:48:73.33:1594,73,0	0/0:42,0:42:99:0,117,2426	0/0:28,0:28:60.13:0,60,1053	0/0:25,0:25:54.44:0,54,1431	0/0:23,0:23:63.10:0,63,991	0/0:31,0:31:84.05:0,84,1675	0/0:88,0:88:99:0,234,4901	1/1:6,11:19:30.10:1172,30,0	1/1:5,16:27:35.95:1376,36,0	1/1:16,24:44:20.67:840,21,0	1/1:5,20:29:50.82:1952,51,0	0/0:44,0:44:99:0,102,2067	0/0:21,0:21:54.09:0,54,1071	1/1:5,1:17:21.07:778,21,0
chr10	93377977	.	G	GCA	162.81	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=4.329;DP=540;FS=15.424;HRun=0;HaplotypeScore=84.0322;InbreedingCoeff=0.4593;MQ=74.82;MQ0=0;MQRankSum=-4.494;QD=2.63;ReadPosRankSum=0.044;VQSLOD=0.6724;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:20:26.77:0,27,223	0/1:6,0:6:13.25:36,0,13	0/0:22,0:21:60.02:0,60,763	0/0:24,0:24:57.15:0,57,735	0/0:25,0:25:75.20:0,75,1032	1/1:10,0:10:3.95:14,4,0	0/1:19,0:19:6.51:7,0,63	0/0:25,0:25:69.15:0,69,856	0/0:20,0:20:60.18:0,60,815	0/0:23,0:23:63.20:0,63,887	0/0:19,0:19:45.14:0,45,625	0/0:21,0:21:60.12:0,60,833	0/0:16,0:16:48.15:0,48,668	0/0:14,0:14:39.12:0,39,538	0/1:21,0:21:14.84:15,0,95	0/0:14,0:14:42.10:0,42,578	0/0:29,0:29:84.26:0,84,1181	0/0:23,0:23:66.14:0,66,874	0/0:19,0:19:51.15:0,51,695	0/0:26,0:26:72.21:0,72,992	0/0:22,0:22:57.16:0,57,779	0/0:23,0:23:66.19:0,66,904	0/0:24,0:24:72.17:0,72,965	0/0:17,0:17:51.12:0,51,690	0/0:16,0:16:45.15:0,45,644	0/0:20,0:20:60.19:0,60,842	0/0:16,0:16:45.14:0,45,627	1/1:0,6:6:12.04:216,12,0
chr10	93377979	.	A	ACCC	1084.70	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=1.804;DP=568;FS=17.547;HRun=7;HaplotypeScore=102.0559;InbreedingCoeff=0.9539;MQ=76.33;MQ0=0;MQRankSum=-5.138;QD=12.33;ReadPosRankSum=-0.148;VQSLOD=-0.1054;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,2:24:9.50:131,9,0	1/1:3,1:6:11.99:135,12,0	0/0:24,0:23:57.05:0,57,732	0/0:26,0:26:53.12:0,53,674	0/0:26,0:27:75.16:0,75,977	1/1:1,9:10:11.99:205,12,0	1/1:4,14:19:15.05:310,15,0	0/0:28,0:28:54.11:0,54,689	0/0:21,0:21:54.15:0,54,719	0/0:23,0:23:66.20:0,66,884	0/0:17,0:17:42.09:0,42,573	0/0:22,0:22:57.17:0,57,778	0/0:17,0:17:45.14:0,45,614	0/0:13,0:13:36.12:0,36,490	1/1:10,12:23:24.06:458,24,0	0/0:14,0:14:39.12:0,39,532	0/0:30,0:30:84.24:0,84,1127	0/0:25,0:25:60.15:0,60,813	0/0:22,0:22:54.08:0,54,670	0/0:26,0:26:66.21:0,66,899	0/0:22,0:22:54.13:0,54,717	0/0:23,0:23:60.19:0,60,818	0/0:24,0:24:66.19:0,66,884	0/0:20,0:19:48.12:0,48,639	0/0:17,0:17:48.14:0,48,638	0/0:22,0:22:57.18:0,57,778	0/0:17,0:17:48.09:0,48,616	1/1:6,0:6:6.90:20,7,0
chr10	93379536	.	TC	T	1103.37	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.673;DP=645;FS=2.841;HRun=6;HaplotypeScore=73.4895;InbreedingCoeff=0.9945;MQ=75.79;MQ0=0;MQRankSum=0.244;QD=23.48;ReadPosRankSum=-0.053;VQSLOD=3.1891;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,105,1356	0/0:9,0:9:27.09:0,27,354	0/0:27,0:25:45.69:0,46,662	0/0:25,0:24:26.48:0,26,417	0/0:29,0:29:84.26:0,84,1090	1/1:2,24:26:66.17:709,66,0	1/1:2,19:21:48.12:516,48,0	0/0:27,0:27:75.22:0,75,943	0/0:35,0:35:99:0,102,1310	0/0:21,0:21:60.20:0,60,787	0/0:12,0:12:33.11:0,33,428	0/0:13,0:13:39.13:0,39,511	0/0:22,0:22:66.21:0,66,860	0/0:22,0:22:66.21:0,66,850	0/0:29,0:29:81.24:0,81,1037	0/0:31,0:31:90.26:0,90,1134	0/0:23,0:23:66.21:0,66,856	0/0:20,0:20:57.18:0,57,748	0/0:15,0:15:45.14:0,45,579	0/0:19,0:19:54.18:0,54,709	0/0:33,0:33:87.28:0,87,1145	0/0:17,0:17:48.16:0,48,632	0/0:16,0:16:45.15:0,45,589	0/0:26,0:25:78.19:0,78,976	0/0:16,0:16:45.15:0,45,590	0/0:35,0:35:93.28:0,93,1193	0/0:28,0:28:81.25:0,81,1043	0/0:9,0:9:18.04:0,18,221
chr10	93380161	.	C	CAT	3009.92	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-2.424;DP=449;FS=11.233;HRun=0;HaplotypeScore=69.5532;InbreedingCoeff=0.8722;MQ=65.54;MQ0=0;MQRankSum=-5.773;QD=31.68;ReadPosRankSum=3.703;VQSLOD=5.4399;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:27.83:0,28,239	0/0:5,0:5:9.03:0,9,109	0/0:16,0:15:21.03:0,21,255	0/1:13,0:5:0.98:1,0,45	0/0:27,0:27:72.22:0,72,930	0/0:20,0:20:57.19:0,57,748	0/0:6,0:6:12.04:0,12,158	0/0:40,0:40:81.23:0,81,1024	0/0:11,0:11:30.10:0,30,394	0/0:24,0:24:69.22:0,69,894	0/0:25,0:25:72.23:0,72,946	1/1:0,10:10:24.76:458,25,0	1/1:2,7:9:21.02:327,21,0	1/1:2,6:8:15.73:296,16,0	0/0:7,0:7:13.99:0,14,186	0/0:16,0:16:42.12:0,42,537	0/0:35,0:35:93.24:0,93,1168	0/0:27,0:27:75.21:0,75,964	0/0:18,0:18:51.16:0,51,658	0/0:24,0:24:54.16:0,54,695	0/0:5,0:5:12.04:0,12,157	1/1:2,3:5:6.02:103,6,0	1/1:2,2:4:6.02:102,6,0	1/1:3,1:4:6.02:103,6,0	1/1:3,16:19:40.47:734,40,0	0/0:18,0:18:51.16:0,51,663	0/0:17,0:17:45.13:0,45,576	1/1:2,21:23:63.22:1080,63,0
chr10	93380171	.	C	CATA	3539.43	PASS	AC=22;AF=0.407;AN=54;BaseQRankSum=7.666;DP=449;FS=1.663;HRun=0;HaplotypeScore=80.7521;InbreedingCoeff=0.8867;MQ=64.62;MQ0=0;MQRankSum=-7.845;QD=32.77;ReadPosRankSum=-0.513;VQSLOD=3.9620;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:15:28.34:349,28,0	1/1:1,0:4:9.03:130,9,0	0/0:14,0:13:11.91:0,12,152	0/0:12,0:4:2.98:0,3,35	0/0:29,0:28:78.26:0,78,1141	1/1:3,18:21:48.16:991,48,0	1/1:4,2:6:6.02:114,6,0	0/0:34,0:34:75.24:0,75,1067	0/0:10,0:11:30.07:0,30,409	0/0:27,0:27:78.13:0,78,1112	0/0:29,0:29:78.25:0,78,1121	1/1:7,5:12:18.02:327,18,0	1/1:3,5:8:15.04:273,15,0	1/1:2,6:8:12.04:246,12,0	1/1:4,1:10:20.98:286,21,0	0/0:13,0:13:39.13:0,39,571	0/0:34,0:35:93.28:0,93,1328	0/0:27,0:27:69.23:0,69,1005	0/0:19,0:19:51.13:0,51,688	0/0:23,0:23:54.18:0,54,781	0/0:4,0:4:9.03:0,9,132	1/1:1,1:2:3.01:62,3,0	1/1:0,4:4:6.02:123,6,0	./.	1/1:5,13:18:33.07:638,33,0	0/0:23,0:23:54.18:0,54,789	0/0:16,0:16:42.13:0,42,596	0/0:21,0:21:51.17:0,51,745
chr10	93381256	.	ATCTC	A	604.35	PASS	AB=0.895;AC=13;AF=0.260;AN=50;BaseQRankSum=2.968;DP=618;FS=1.898;HRun=0;HaplotypeScore=165.5276;InbreedingCoeff=-0.0551;MQ=63.21;MQ0=10;MQRankSum=-2.260;QD=2.85;ReadPosRankSum=-1.319;VQSLOD=2.5552;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:20:5.93:0,6,40	0/0:16,0:16:6.41:0,6,42	./.	./.	0/0:18,0:20:3.12:0,3,37	0/0:13,0:15:1.77:0,2,41	0/0:24,0:24:3.51:0,4,22	./.	0/1:15,9:24:11.96:40,0,12	0/0:25,0:26:21.95:0,22,200	1/1:15,0:15:3.01:46,3,0	1/1:13,0:14:6.02:77,6,0	0/1:18,0:19:38.48:76,0,38	0/1:19,0:19:13.46:69,0,13	0/1:17,0:18:18.89:19,0,41	0/1:17,1:20:0.32:179,0,0	0/1:21,0:22:28.82:49,0,29	0/1:9,0:11:12.27:46,0,12	0/0:32,0:28:14.98:0,15,157	0/0:24,0:24:5.97:0,6,90	0/0:34,0:35:37.62:0,38,579	0/0:21,0:22:5.98:0,6,48	0/0:13,0:14:1.92:0,2,22	0/0:36,0:37:9.44:0,9,71	0/1:22,0:23:29.54:30,0,40	0/1:20,3:24:78.94:112,0,79	0/0:25,0:35:35.67:0,36,511	0/0:6,0:8:11.60:0,12,99
chr10	93381302	.	CTCTT	C	904.85	PASS	AB=0.926;AC=19;AF=0.339;AN=56;BaseQRankSum=8.473;DP=726;FS=47.206;HRun=0;HaplotypeScore=170.2130;InbreedingCoeff=0.0996;MQ=61.55;MQ0=38;MQRankSum=-0.911;QD=2.12;ReadPosRankSum=0.960;VQSLOD=1.1924;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:41.76:0,42,251	0/0:9,0:9:6.75:0,7,142	0/1:47,0:17:3.75:4,0,130	0/1:64,0:18:35.92:36,0,80	0/1:17,0:16:28.06:28,0,113	0/1:22,0:22:18.42:18,0,254	0/0:31,0:29:10.41:0,10,328	0/0:22,0:20:52.66:0,53,453	0/0:17,0:17:0.52:0,1,128	0/0:30,0:29:71.25:0,71,774	0/1:15,0:15:3.17:3,0,147	0/1:7,17:22:7.89:102,0,8	1/1:23,4:25:18.69:222,19,0	1/1:11,14:24:9.32:143,9,0	0/0:23,0:23:38.99:0,39,347	0/1:29,0:28:93.54:94,0,312	0/0:19,0:19:16.61:0,17,299	0/0:16,0:16:6.58:0,7,226	0/1:16,0:13:9.97:10,0,194	0/0:13,0:13:29.85:0,30,276	0/0:28,0:28:25.01:0,25,600	0/1:10,20:30:4.33:10,0,4	0/0:7,13:19:2.60:0,3,11	1/1:38,0:37:4.31:27,4,0	1/1:26,3:27:23.84:326,24,0	0/1:21,0:19:30.80:31,0,287	0/0:40,0:37:58.56:0,59,840	0/1:22,0:20:19.89:20,0,232
chr10	93381328	.	C	CTCTCTC	3107.32	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-0.030;DP=719;FS=1.398;HRun=0;HaplotypeScore=177.8432;InbreedingCoeff=0.5742;MQ=75.08;MQ0=12;MQRankSum=-1.705;QD=10.22;ReadPosRankSum=-6.033;VQSLOD=0.5914;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:22:39.34:39,0,262	0/1:8,0:8:28.97:29,0,154	0/0:61,0:39:41.35:0,41,752	0/0:71,0:42:45.59:0,46,879	0/0:14,0:14:35.80:0,36,542	0/1:25,0:25:44.48:44,0,395	0/1:22,0:22:47.87:48,0,433	0/0:26,0:25:56.58:0,57,759	0/0:17,0:17:41.90:0,42,633	0/0:29,0:29:83.42:0,83,1380	0/0:16,0:16:27.03:0,27,463	1/1:24,0:24:23.63:203,24,0	1/1:12,14:27:24.46:279,24,0	1/1:28,0:28:28.18:258,28,0	0/1:27,0:27:65.07:65,0,452	0/0:28,0:28:84.09:0,84,1453	0/0:23,0:23:66.10:0,66,1251	0/0:20,0:20:33.92:0,34,861	0/0:12,0:9:23.99:0,24,394	0/0:16,0:16:37.80:0,38,583	0/0:25,0:25:59.86:0,60,916	1/1:24,0:24:11.92:135,12,0	1/1:18,0:17:5.58:48,6,0	1/1:35,0:34:5.06:121,5,0	1/1:26,0:26:60.06:1313,60,0	0/0:14,0:13:29.92:0,30,533	0/0:39,0:38:74.85:0,75,1464	1/1:16,0:15:36.07:726,36,0
chr10	93381329	.	T	TCTCTCT	3107.32	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-0.059;DP=710;FS=1.398;HRun=0;HaplotypeScore=177.3795;InbreedingCoeff=0.5742;MQ=75.54;MQ0=11;MQRankSum=0.165;QD=10.36;ReadPosRankSum=-6.080;VQSLOD=0.7621;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:22:39.34:39,0,262	0/1:8,0:8:28.97:29,0,154	0/0:59,0:38:41.35:0,41,752	0/0:73,0:43:45.59:0,46,879	0/0:15,0:15:35.80:0,36,542	0/1:24,0:24:44.48:44,0,395	0/1:22,0:22:47.87:48,0,433	0/0:24,0:24:56.58:0,57,759	0/0:17,0:17:41.90:0,42,633	0/0:28,0:28:83.43:0,83,1380	0/0:16,0:16:27.03:0,27,463	1/1:24,0:24:23.63:203,24,0	1/1:27,0:27:24.46:279,24,0	1/1:26,0:26:28.18:258,28,0	0/1:27,0:27:65.07:65,0,452	0/0:28,0:28:84.09:0,84,1453	0/0:24,0:24:66.10:0,66,1251	0/0:21,0:21:33.92:0,34,861	0/0:12,0:9:23.99:0,24,394	0/0:17,0:17:37.80:0,38,583	0/0:25,0:25:59.86:0,60,916	1/1:24,0:24:11.92:135,12,0	1/1:17,0:16:5.58:48,6,0	1/1:9,25:34:5.06:121,5,0	1/1:26,0:26:60.06:1313,60,0	0/0:13,0:12:29.93:0,30,533	0/0:37,0:36:74.94:0,75,1464	1/1:16,0:15:36.07:726,36,0
chr10	93382696	.	A	AT	3783.69	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-14.180;DP=697;FS=6.187;HRun=7;HaplotypeScore=63.2255;InbreedingCoeff=0.9980;MQ=83.09;MQ0=0;MQRankSum=-2.520;QD=31.27;ReadPosRankSum=2.850;VQSLOD=3.7728;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:35:93.29:1124,93,0	1/1:1,9:10:21.06:254,21,0	0/0:23,0:23:60.06:0,60,573	0/0:17,0:17:41.68:0,42,372	0/0:41,0:41:99:0,123,1182	1/1:2,25:27:75.23:906,75,0	1/1:2,26:28:69.21:834,69,0	0/0:26,0:26:63.05:0,63,586	0/0:31,0:31:72.11:0,72,695	0/0:33,0:33:90.10:0,90,853	0/0:21,0:21:57.07:0,57,545	0/0:25,0:25:66.09:0,66,632	0/0:18,0:18:54.09:0,54,521	0/0:20,0:20:54.06:0,54,514	1/1:1,19:21:57.04:667,57,0	0/0:21,0:21:63.10:0,63,608	0/0:31,0:31:87.05:0,87,818	0/0:15,0:15:42.04:0,42,397	0/0:13,0:13:30.05:0,30,290	0/0:30,0:30:78.10:0,78,741	0/0:27,0:27:66.08:0,66,628	0/0:26,0:26:75.12:0,75,724	0/0:26,0:26:69.11:0,69,666	0/0:25,0:25:69.11:0,69,666	0/0:21,0:21:54.08:0,54,521	0/0:46,0:46:99:0,126,1196	0/0:32,0:32:91.37:0,91,866	0/0:8,0:8:21.03:0,21,203
chr10	93383026	.	AT	A	485.44	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.231;DP=632;FS=13.933;HRun=7;HaplotypeScore=89.5040;InbreedingCoeff=0.9547;MQ=72.26;MQ0=2;MQRankSum=-1.026;QD=25.55;ReadPosRankSum=1.542;VQSLOD=2.9579;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,109,1149	0/0:12,0:12:33.07:0,33,341	0/0:36,0:18:26.52:0,27,219	0/0:11,0:10:10.44:0,10,80	0/0:31,0:31:84.23:0,84,1010	0/0:18,0:18:51.05:0,51,531	0/0:19,0:19:51.37:0,51,520	0/0:29,0:29:66.16:0,66,757	0/0:20,0:20:54.16:0,54,661	0/0:25,0:25:66.20:0,66,811	0/0:21,0:21:60.17:0,60,716	0/0:18,0:18:51.14:0,51,598	0/0:12,0:12:36.10:0,36,432	0/0:9,0:9:24.08:0,24,298	0/0:23,0:23:42.10:0,42,487	0/0:15,0:15:33.10:0,33,407	0/0:41,0:41:99:0,120,1395	0/0:38,0:37:99:0,102,1207	0/0:33,0:33:87.13:0,87,1003	0/0:23,0:23:69.18:0,69,822	0/0:10,0:10:30.08:0,30,359	0/0:19,0:19:48.08:0,48,555	0/0:25,0:25:66.19:0,66,804	0/0:21,0:21:51.05:0,51,600	0/0:21,0:21:48.10:0,48,546	0/0:21,0:21:60.17:0,60,733	0/0:22,0:22:63.18:0,63,763	1/1:0,19:19:57.13:580,57,0
chr10	93383146	.	G	GTGGTTGGATATCTCAGAC	36138.34	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-2.443;DP=657;FS=0.000;HRun=0;HaplotypeScore=243.0528;InbreedingCoeff=0.9507;MQ=63.74;MQ0=0;MQRankSum=-18.432;QD=115.46;ReadPosRankSum=0.043;VQSLOD=4.4228;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,9:33:42.08:3444,42,0	1/1:4,3:7:15.05:1190,15,0	0/0:11,0:11:30.02:0,30,761	0/1:10,0:10:2.73:3,0,421	0/0:25,0:25:75.23:0,75,3212	1/1:10,13:32:69:4613,69,0	1/1:9,3:24:33.03:1774,33,0	0/0:26,0:26:78.24:0,78,2977	0/0:28,0:28:84.29:0,84,3929	0/0:33,0:33:93.32:0,93,4357	0/0:19,0:19:51.18:0,51,2319	1/1:15,9:36:71.95:3615,72,0	1/1:6,9:19:45.07:3532,45,0	1/1:5,9:23:36.12:2778,36,0	1/1:9,6:28:44.81:2619,45,0	0/0:21,0:21:63.20:0,63,2984	0/0:38,0:38:99:0,114,5102	0/0:22,0:22:63.18:0,63,2718	0/0:18,0:18:45.14:0,45,1745	0/0:17,0:17:51.17:0,51,2217	0/0:38,0:38:99:0,111,5048	1/1:11,5:23:38.81:2108,39,0	1/1:6,8:16:38.83:2621,39,0	1/1:11,4:21:39.05:2695,39,0	1/1:7,11:27:51.09:3545,51,0	0/0:24,0:24:69.22:0,69,3058	0/0:24,0:23:72.23:0,72,3519	1/1:6,4:13:24:1602,24,0
chr10	93383556	.	A	AT	486.35	PASS	AB=0.500;AC=11;AF=0.289;AN=38;BaseQRankSum=5.847;DP=367;FS=1.098;HRun=0;HaplotypeScore=57.1390;InbreedingCoeff=0.8053;MQ=50.25;MQ0=26;MQRankSum=-1.636;QD=32.42;ReadPosRankSum=4.384;VQSLOD=3.4759;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/0:7,0:4:9.03:0,9,125	./.	./.	0/0:16,0:13:39.12:0,39,531	0/0:27,0:26:72.24:0,72,1006	0/0:21,0:16:27.09:0,27,378	0/0:7,0:7:11.81:0,12,168	1/1:0,3:3:9.03:144,9,0	./.	1/1:0,3:3:9.03:142,9,0	./.	0/0:11,0:11:30.08:0,30,400	0/0:55,1:54:99:0,147,2036	0/0:23,0:22:66.22:0,66,922	0/0:23,0:14:36.09:0,36,468	0/0:3,0:2:6.02:0,6,84	0/0:87,0:78:99:0,196,2688	1/1:1,3:3:9.03:144,9,0	0/1:0,1:1:0:0,0,0	./.	1/1:0,3:3:9.03:144,9,0	0/0:24,0:20:45.12:0,45,609	0/0:18,0:18:36.12:0,36,503	1/1:0,1:1:3.01:48,3,0
chr10	93385390	.	GAAGGAAAGAAAGA	G	3723.75	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.391;DP=539;FS=0.000;HRun=0;HaplotypeScore=185.1303;InbreedingCoeff=0.9583;MQ=63.97;MQ0=3;MQRankSum=-8.611;QD=45.97;ReadPosRankSum=0.436;VQSLOD=2.7215;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,22:29:24.08:852,24,0	1/1:0,8:8:12.04:375,12,0	0/0:16,0:11:24.55:0,25,888	0/0:14,0:11:7.43:0,7,510	0/0:24,0:24:61.45:0,61,3237	1/1:3,11:13:24.08:908,24,0	1/1:4,10:14:9.03:340,9,0	0/0:31,0:31:63.22:0,63,2954	0/0:14,0:14:30.10:0,30,1533	0/0:16,0:16:39.13:0,39,2473	0/0:29,0:29:78.27:0,78,4452	0/0:20,0:20:57.20:0,57,3247	0/0:15,0:15:39.13:0,39,2315	0/0:16,0:16:42.14:0,42,2191	1/1:1,15:16:33.11:1248,33,0	0/0:19,0:19:48.16:0,48,2390	0/0:24,0:24:57.20:0,57,2813	0/0:35,0:34:90.31:0,90,5124	0/0:18,0:18:33.11:0,33,1782	0/0:21,0:21:57.19:0,57,3067	0/0:10,0:10:30.10:0,30,1519	0/0:10,0:10:27.07:0,27,1093	0/0:26,0:26:69.24:0,69,3653	0/0:15,0:15:30.10:0,30,1391	0/0:24,0:24:60.20:0,60,3519	0/0:24,0:24:63.22:0,63,3371	0/0:28,0:28:75.26:0,75,4024	0/0:9,0:9:27.09:0,27,1711
chr10	93385674	.	G	GAGGGCTGTTGGTT	42685.14	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-3.011;DP=623;FS=4.637;HRun=0;HaplotypeScore=197.8451;InbreedingCoeff=0.9996;MQ=85.11;MQ0=0;MQRankSum=-19.788;QD=142.28;ReadPosRankSum=0.746;VQSLOD=5.1096;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,13:40:81.27:4766,81,0	1/1:5,2:10:24:1129,24,0	0/0:30,0:30:87.28:0,87,2948	0/0:32,0:31:76.08:0,76,2145	0/0:24,0:24:69.22:0,69,2651	1/1:10,14:27:69.24:3968,69,0	1/1:15,14:31:81.28:5017,81,0	0/0:33,0:33:96.32:0,96,3512	0/0:19,0:19:54.18:0,54,2094	0/0:17,0:17:42.62:0,43,1694	0/0:25,0:25:75.26:0,75,2955	1/1:14,12:30:75.26:4504,75,0	1/1:7,10:22:51.18:3176,51,0	1/1:5,7:15:42.14:2432,42,0	1/1:10,11:23:63.22:3712,63,0	0/0:18,0:18:51.18:0,51,1966	1/1:5,10:19:42.14:2469,42,0	0/0:15,0:15:45.13:0,45,1741	0/0:13,0:13:39.13:0,39,1372	0/0:28,0:28:84.29:0,84,3296	0/0:27,0:27:81.25:0,81,2886	1/1:8,5:14:42.14:2227,42,0	1/1:8,6:17:39.13:1881,39,0	1/1:14,2:19:48.16:2401,48,0	1/1:14,15:33:87.30:5003,87,0	0/0:17,0:17:48.16:0,48,1884	0/0:15,0:15:45.15:0,45,1729	0/0:10,0:10:30.10:0,30,1227
chr10	93386494	.	T	TTTTACAAG	1315.69	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.311;DP=644;FS=11.568;HRun=0;HaplotypeScore=182.0627;InbreedingCoeff=0.9990;MQ=87.93;MQ0=0;MQRankSum=-5.660;QD=101.21;ReadPosRankSum=0.385;VQSLOD=4.1023;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,114,2950	0/0:11,0:11:33.11:0,33,890	0/0:23,0:23:51.15:0,51,1220	0/0:22,0:22:57.19:0,57,1405	0/0:20,0:20:51.15:0,51,1268	0/0:25,0:25:66.23:0,66,1733	0/0:37,0:37:96.32:0,96,2389	0/0:29,0:29:84.28:0,84,2070	0/0:17,0:17:48.15:0,48,1236	0/0:25,0:25:69.24:0,69,1806	0/0:12,0:12:36.11:0,36,914	0/0:30,0:30:78.26:0,78,2018	0/0:18,0:18:51.16:0,51,1317	0/0:28,0:28:78.27:0,78,2076	0/0:18,0:18:51.18:0,51,1342	0/0:19,0:19:51.15:0,51,1243	0/0:35,0:35:87.30:0,87,2326	0/0:26,0:26:60.21:0,60,1579	0/0:25,0:25:57.18:0,57,1428	0/0:22,0:22:63.17:0,63,1594	0/0:33,0:33:87.28:0,87,2186	0/0:24,0:24:57.20:0,57,1484	0/0:15,0:15:33.11:0,33,875	0/0:25,0:25:66.23:0,66,1755	0/0:16,0:16:45.12:0,45,1080	0/0:17,0:17:51.18:0,51,1376	0/0:16,0:15:45.15:0,45,1160	1/1:8,5:13:33.11:1410,33,0
chr10	93388225	.	TGTTA	T	949.18	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.203;DP=646;FS=17.297;HRun=0;HaplotypeScore=105.2341;InbreedingCoeff=0.9798;MQ=70.13;MQ0=1;MQRankSum=-2.674;QD=39.55;ReadPosRankSum=-0.189;VQSLOD=2.5477;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:63.22:0,63,1662	0/0:12,0:12:33.11:0,33,871	0/0:14,0:14:36.12:0,36,918	0/0:18,0:15:42.14:0,42,1085	0/0:41,0:41:99:0,117,3040	0/0:25,0:25:60.21:0,60,1559	0/0:12,0:12:21.07:0,21,503	0/0:30,0:30:78.27:0,78,1988	0/0:22,0:21:60.19:0,60,1514	0/0:25,0:25:72.25:0,72,1883	0/0:40,0:40:99:0,117,3006	0/0:17,0:17:51.18:0,51,1347	0/0:12,0:12:15.05:0,15,378	0/0:16,0:16:39.13:0,39,978	0/0:20,0:20:57.20:0,57,1504	0/0:22,0:22:63.20:0,63,1522	1/1:5,19:24:57.20:1044,57,0	0/0:20,0:20:54.19:0,54,1408	0/0:19,0:19:57.19:0,57,1434	0/0:43,0:43:99:0,123,3132	0/0:16,0:16:48.16:0,48,1254	0/0:14,0:14:39.13:0,39,1029	0/0:25,0:25:63.22:0,63,1614	0/0:13,0:13:32.91:0,33,779	0/0:21,0:21:48.16:0,48,1207	0/0:47,0:47:99:0,135,3530	0/0:31,0:31:93.31:0,93,2402	0/0:21,0:21:63.22:0,63,1664
chr10	93388278	.	AT	A	2332.02	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=7.175;DP=645;FS=6.817;HRun=4;HaplotypeScore=82.9562;InbreedingCoeff=0.9929;MQ=69.17;MQ0=6;MQRankSum=3.319;QD=17.67;ReadPosRankSum=4.095;VQSLOD=2.8560;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:79.49:0,79,569	0/0:12,0:12:26.98:0,27,255	0/0:49,0:14:16.16:0,16,330	0/0:49,0:26:57.29:0,57,533	0/0:32,0:32:87.25:0,87,1153	1/1:2,20:22:48.12:560,48,0	1/1:0,15:15:27.08:322,27,0	0/0:38,0:38:99:0,102,1337	0/0:14,0:14:33.09:0,33,429	0/0:24,0:23:60.18:0,60,781	0/0:39,0:39:99:0,102,1330	1/1:8,7:15:36.60:303,37,0	1/1:0,17:17:30.01:282,30,0	1/1:0,7:7:17.99:164,18,0	0/0:17,0:17:47.92:0,48,456	0/0:18,0:18:54.15:0,54,719	0/0:27,0:27:59.32:0,59,420	0/0:29,0:30:73.44:0,73,1021	0/0:23,0:21:60.15:0,60,761	0/0:23,0:23:60.11:0,60,707	0/0:9,0:9:21.05:0,21,261	1/1:1,11:12:17.65:166,18,0	1/1:4,12:16:20.67:183,21,0	1/1:3,5:8:21.10:162,21,0	1/1:2,18:20:39.83:405,40,0	0/0:34,0:34:99:0,99,1275	0/0:24,0:23:69.11:0,69,836	0/0:18,0:18:32.05:0,32,221
chr10	93388292	.	AT	A	3579.49	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=9.279;DP=635;FS=9.387;HRun=8;HaplotypeScore=75.9623;InbreedingCoeff=0.9646;MQ=66.74;MQ0=9;MQRankSum=0.584;QD=19.14;ReadPosRankSum=5.816;VQSLOD=2.8791;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:34:72.11:691,72,0	1/1:2,6:8:15.02:144,15,0	0/0:61,1:15:2.32:0,2,144	0/0:62,1:27:43.56:0,44,357	0/0:34,0:34:87.16:0,87,944	0/0:26,0:26:60.95:0,61,398	0/0:16,0:16:32.27:0,32,200	0/0:35,0:35:93.24:0,93,1062	0/0:13,0:13:36.05:0,36,381	0/0:18,0:17:42.09:0,42,458	0/0:35,0:35:87.15:0,87,945	1/1:13,0:13:25.82:221,26,0	1/1:15,0:15:30.01:281,30,0	1/1:6,0:6:18.02:168,18,0	1/1:3,14:17:30.05:289,30,0	0/0:19,0:19:54.12:0,54,605	1/1:2,24:26:54:503,54,0	0/0:29,0:30:71.54:0,72,827	0/0:21,0:21:63.16:0,63,720	0/0:16,0:16:39.11:0,39,448	0/0:7,0:7:18.01:0,18,178	1/1:12,0:12:23.92:207,24,0	1/1:14,1:15:18.02:167,18,0	1/1:9,0:9:15.02:142,15,0	1/1:21,0:21:46.13:449,46,0	0/0:29,0:29:75.17:0,75,840	0/0:21,0:20:57.13:0,57,636	1/1:0,11:11:33.05:318,33,0
chr10	93388623	.	AGTGTGTGTGTGTGT	A	3770.39	PASS	AB=0.791;AC=26;AF=0.500;AN=52;BaseQRankSum=7.179;DP=533;FS=17.487;HRun=0;HaplotypeScore=210.7570;InbreedingCoeff=0.5674;MQ=54.67;MQ0=9;MQRankSum=-6.510;QD=14.17;ReadPosRankSum=-2.390;VQSLOD=1.1327;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:33:17.40:17,0,119	0/1:7,0:11:23:163,0,23	./.	./.	0/0:16,0:20:27.09:0,27,1066	1/1:7,0:12:15.05:488,15,0	1/1:15,0:15:2.92:17,3,0	0/0:23,0:22:9.03:0,9,205	0/0:17,0:22:6.34:0,6,573	0/0:18,0:25:39:0,39,1008	0/1:14,0:19:2.73:3,0,466	1/1:14,1:18:12.04:370,12,0	1/1:14,5:19:9.03:350,9,0	1/1:16,7:23:20.86:806,21,0	0/1:14,0:16:11.30:27,0,11	0/0:15,0:19:15:0,15,272	0/0:23,0:24:12.04:0,12,338	0/0:13,0:13:18.04:0,18,316	0/0:19,0:20:18.95:0,19,823	0/0:12,0:18:27.07:0,27,964	0/0:33,0:33:27.98:0,28,1216	1/1:13,3:18:15.05:537,15,0	1/1:14,3:16:6.49:169,6,0	1/1:13,2:16:12.03:316,12,0	1/1:8,4:12:3.01:117,3,0	1/1:21,0:25:8.07:291,8,0	0/0:13,0:16:21.07:0,21,920	1/1:4,0:8:3.01:98,3,0
chr10	93389041	.	GGGCACTTCCAA	G	26116.79	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=18.754;DP=628;FS=0.000;HRun=0;HaplotypeScore=213.4335;InbreedingCoeff=0.9943;MQ=83.38;MQ0=0;MQRankSum=-19.963;QD=92.61;ReadPosRankSum=4.436;VQSLOD=4.7760;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:75.26:2788,75,0	1/1:0,8:8:21.07:780,21,0	0/0:23,0:23:69.24:0,69,3368	0/0:24,0:24:56.16:0,56,3592	0/0:16,0:16:48.16:0,48,2762	1/1:0,23:23:66.23:2458,66,0	1/1:0,26:27:63.22:2334,63,0	0/0:23,0:23:66.22:0,66,3185	0/0:25,0:25:75.26:0,75,4325	0/0:24,0:24:72.25:0,72,3793	0/0:7,0:7:21.07:0,21,1174	1/1:0,29:30:84.29:3128,84,0	1/1:0,23:23:57.20:2121,57,0	1/1:1,22:23:69.24:2565,69,0	1/1:0,31:31:87.30:3235,87,0	0/0:23,0:23:69.23:0,69,3941	1/1:0,25:25:36.12:1337,36,0	0/0:24,0:24:72.25:0,72,4147	0/0:23,0:23:69.20:0,69,3256	0/0:19,0:19:57.18:0,57,2982	0/0:62,0:62:99:0,187,10649	1/1:0,13:14:33.11:1215,33,0	1/1:0,12:12:30.10:1101,30,0	1/1:0,14:14:24.08:873,24,0	1/1:0,21:21:60.21:2180,60,0	0/0:26,0:26:78.27:0,78,4533	0/0:23,0:23:69.22:0,69,3911	0/0:4,0:4:12.04:0,12,710
chr10	93389808	.	C	CTCCTGCTTCCTG	28417	PASS	AC=26;AF=0.500;AN=52;BaseQRankSum=-8.081;DP=736;FS=12.566;HRun=0;HaplotypeScore=180.8501;InbreedingCoeff=0.9875;MQ=30.55;MQ0=118;MQRankSum=-9.061;QD=91.67;ReadPosRankSum=1.201;VQSLOD=4.2625;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,11:14:30.10:1485,30,0	1/1:6,5:12:21.03:977,21,0	./.	./.	0/0:25,0:23:32.62:0,33,1059	1/1:13,10:20:45.11:2045,45,0	1/1:8,4:13:27.05:1034,27,0	0/0:54,0:18:42.10:0,42,1271	0/0:25,0:23:39.13:0,39,1380	0/0:32,0:27:69.24:0,69,2419	0/0:21,0:20:27.02:0,27,771	1/1:17,18:27:63.22:3454,63,0	1/1:16,19:30:81.23:4096,81,0	1/1:12,10:23:57.15:2434,57,0	1/1:14,14:25:60.16:3004,60,0	0/0:21,0:21:48.16:0,48,1617	1/1:14,8:13:27.09:1420,27,0	0/0:52,0:35:10.49:0,10,665	0/0:31,0:15:42.12:0,42,1294	0/0:20,0:19:51.16:0,51,1720	0/0:62,0:36:32.97:0,33,1079	1/1:11,19:30:69.24:3610,69,0	1/1:6,10:14:30.10:1626,30,0	1/1:12,6:13:15.05:815,15,0	1/1:18,12:30:57.20:2415,57,0	0/0:30,0:25:72.19:0,72,2401	0/0:24,0:23:28.03:0,28,857	0/0:19,0:15:14.87:0,15,333
chr10	93389932	.	CCTGA	C	506.76	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.213;DP=640;FS=1.181;HRun=0;HaplotypeScore=96.9536;InbreedingCoeff=0.9911;MQ=54.68;MQ0=65;MQRankSum=-0.931;QD=31.67;ReadPosRankSum=2.158;VQSLOD=3.8245;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:41:99:0,117,3168	0/0:13,0:12:36.12:0,36,978	0/0:14,0:13:36.12:0,36,838	0/0:13,0:12:36.10:0,36,904	0/0:26,0:24:57.16:0,57,1438	0/0:29,0:25:63.22:0,63,1715	0/0:19,0:19:51.18:0,51,1377	0/0:32,0:16:42.14:0,42,1141	0/0:17,0:15:39.13:0,39,1045	0/0:31,0:29:81.27:0,81,2122	0/0:16,0:15:42.14:0,42,1120	0/0:32,0:28:72.25:0,72,1967	0/0:25,0:24:63.22:0,63,1714	0/0:20,0:19:51.18:0,51,1375	0/0:19,0:18:36.12:0,36,975	0/0:12,0:9:18.06:0,18,465	0/0:23,0:21:57.20:0,57,1561	0/0:25,0:21:51.09:0,51,1322	0/0:37,0:16:48.16:0,48,1315	0/0:23,0:23:63.22:0,63,1699	0/0:25,0:22:66.18:0,66,1745	0/0:18,0:17:45.15:0,45,1195	0/0:25,0:25:75.26:0,75,1994	0/0:30,0:27:72.25:0,72,1966	0/0:16,0:16:45.15:0,45,1222	0/0:19,0:16:48.16:0,48,1315	0/0:21,0:18:48.16:0,48,1286	1/1:3,13:14:33.07:601,33,0
chr10	93390098	.	C	CG	6568.86	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.723;DP=602;FS=13.938;HRun=0;HaplotypeScore=76.4969;InbreedingCoeff=0.9857;MQ=75.72;MQ0=0;MQRankSum=-2.257;QD=39.57;ReadPosRankSum=3.161;VQSLOD=4.1828;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,162,2224	0/0:6,0:6:14.98:0,15,185	0/0:15,0:15:42.10:0,42,566	0/0:8,0:8:17.72:0,18,189	0/0:20,0:20:51.14:0,51,679	0/0:25,0:25:72.24:0,72,1006	0/0:28,0:28:81.27:0,81,1132	0/0:39,0:39:99:0,111,1524	0/0:16,0:16:48.16:0,48,671	0/0:24,0:24:72.24:0,72,1005	0/0:17,0:17:45.15:0,45,627	1/1:1,29:30:78.24:1229,78,0	1/1:1,21:22:60.18:921,60,0	1/1:2,17:19:48.13:739,48,0	0/0:19,0:19:54.18:0,54,755	0/0:14,0:14:42.14:0,42,587	1/1:0,28:28:78.27:1242,78,0	0/0:13,0:13:39.11:0,39,526	0/0:22,0:22:66.21:0,66,907	0/0:21,0:21:60.20:0,60,838	0/0:42,0:42:99:0,120,1675	1/1:0,10:10:24.08:380,24,0	1/1:0,9:9:21.06:334,21,0	1/1:0,23:23:66.01:1012,66,0	1/1:1,15:16:36.12:569,36,0	0/0:30,0:30:90.30:0,90,1258	0/0:22,0:22:63.19:0,63,862	1/1:0,9:9:8.90:143,9,0
chr10	93390938	.	CAA	C	1263.44	PASS	AB=0.684;AC=26;AF=0.464;AN=56;BaseQRankSum=8.744;DP=558;FS=0.448;HRun=18;HaplotypeScore=82.3462;InbreedingCoeff=0.6115;MQ=71.08;MQ0=2;MQRankSum=-1.342;QD=5.18;ReadPosRankSum=9.224;VQSLOD=-0.7024;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:31:43.17:184,43,0	1/1:2,0:8:10.66:46,11,0	0/0:32,0:13:20.72:0,21,157	0/0:19,0:12:4.61:0,5,19	0/0:24,0:30:30.26:0,30,459	1/1:3,0:11:18.66:80,19,0	1/1:6,0:18:21.18:91,21,0	0/0:28,0:28:24.04:0,24,271	0/0:24,0:27:52.77:0,53,540	0/0:10,0:18:39.07:0,39,410	0/0:18,0:24:37.62:0,38,279	1/1:3,9:14:32.13:224,32,0	0/1:7,6:15:16.25:42,0,16	0/1:5,8:14:57.97:89,0,58	1/1:5,0:20:23.97:103,24,0	0/0:13,0:18:33.53:0,34,305	1/1:7,0:19:32.69:138,33,0	0/1:20,1:24:19.05:19,0,337	0/0:19,1:26:41.18:0,41,521	0/0:24,0:24:47.92:0,48,476	0/0:12,0:13:17.39:0,17,176	0/1:6,12:20:16.74:139,0,17	1/1:8,5:14:11.18:78,11,0	1/1:10,9:21:6.99:80,7,0	1/1:1,10:11:1.67:135,2,0	0/0:24,1:30:38.49:0,38,380	0/0:22,1:24:10.84:0,11,266	1/1:2,0:2:2.97:22,3,0
chr10	93392432	.	AACACAC	A	2135.50	PASS	AB=0.712;AC=21;AF=0.420;AN=50;BaseQRankSum=-2.302;DP=526;FS=22.510;HRun=0;HaplotypeScore=139.9688;InbreedingCoeff=0.6738;MQ=65.39;MQ0=8;MQRankSum=-3.736;QD=9.80;ReadPosRankSum=0.854;VQSLOD=0.9868;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:12.04:0,12,243	0/0:7,0:8:6.02:0,6,92	./.	./.	1/1:9,4:14:3.33:21,3,0	0/0:20,0:22:42.14:0,42,950	0/0:15,0:15:17.20:0,17,782	0/1:18,3:19:20.46:98,0,20	1/1:8,14:22:3.01:61,3,0	1/1:8,11:21:35.61:556,36,0	0/1:8,13:21:0:0,0,0	0/0:11,0:15:10.27:0,10,167	0/0:9,0:14:12.02:0,12,265	0/0:7,0:20:9.01:0,9,138	0/0:27,0:26:42.10:0,42,775	1/1:5,9:16:6.02:121,6,0	0/0:9,0:23:12.04:0,12,305	1/1:11,1:11:10.59:186,11,0	1/1:14,5:19:10.25:168,10,0	1/1:5,13:19:6.02:122,6,0	./.	0/0:12,0:13:15.05:0,15,359	0/0:16,0:14:12.04:0,12,206	0/0:24,0:24:15.52:0,16,317	0/0:5,0:21:9.03:0,9,236	1/1:11,15:26:45.15:845,45,0	0/1:8,9:18:1.18:37,0,1	1/1:7,0:8:13.83:97,14,0
chr10	93392649	.	A	AC	10372.23	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-17.618;DP=816;FS=2.063;HRun=1;HaplotypeScore=90.3949;InbreedingCoeff=0.9984;MQ=59.54;MQ0=5;MQRankSum=2.810;QD=38.99;ReadPosRankSum=3.254;VQSLOD=5.4316;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:36:85.67:0,86,1170	0/0:10,0:10:30.10:0,30,420	0/0:23,0:11:27.08:0,27,364	0/0:21,0:10:17.67:0,18,220	0/0:37,0:37:99:0,105,1469	0/0:24,0:24:66.18:0,66,898	0/0:22,0:21:57.18:0,57,795	0/0:46,0:46:99:0,135,1859	0/0:34,0:34:87.29:0,87,1215	0/0:51,0:51:99:0,154,2118	0/0:22,0:22:63.20:0,63,857	1/1:0,33:33:78.27:1247,78,0	1/1:0,32:32:84.29:1343,84,0	1/1:0,29:29:84.29:1343,84,0	0/0:29,0:29:84.18:0,84,1109	0/0:33,0:33:87.26:0,87,1196	1/1:1,26:26:59.49:957,59,0	0/0:20,0:20:60.14:0,60,798	0/0:22,0:21:63.21:0,63,869	0/0:33,0:33:96.32:0,96,1340	0/0:26,0:26:69.11:0,69,924	1/1:0,27:27:72.25:1151,72,0	1/1:0,29:29:81.28:1295,81,0	1/1:1,27:30:57.19:911,57,0	1/1:1,34:35:75.12:1166,75,0	0/0:39,0:39:99:0,114,1579	0/0:22,0:22:57.17:0,57,774	1/1:2,22:23:60.20:959,60,0
chr10	93397044	.	T	TG	18864.19	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.893;DP=615;FS=5.591;HRun=5;HaplotypeScore=68.4896;InbreedingCoeff=0.9984;MQ=87.32;MQ0=0;MQRankSum=-9.451;QD=32.98;ReadPosRankSum=6.138;VQSLOD=4.8103;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:2,38:40:99:1421,108,0	1/1:0,10:10:27.09:355,27,0	0/0:23,0:23:36.04:0,36,448	0/0:20,0:20:51.09:0,51,523	1/1:3,25:28:75.24:978,75,0	1/1:1,19:20:51.17:671,51,0	1/1:0,22:22:57.19:749,57,0	1/1:8,17:25:45.15:591,45,0	1/1:0,19:19:51.17:671,51,0	1/1:2,20:22:60.19:787,60,0	1/1:4,11:15:27.09:355,27,0	1/1:2,16:18:45.15:591,45,0	1/1:2,23:25:57.19:750,57,0	1/1:0,25:25:72.23:947,72,0	1/1:1,33:34:84.27:1105,84,0	1/1:1,22:23:60.20:789,60,0	1/1:2,22:24:57.19:750,57,0	1/1:0,14:14:39.13:513,39,0	1/1:3,16:19:48.13:613,48,0	1/1:3,15:18:36.12:469,36,0	1/1:1,20:21:54.18:711,54,0	1/1:2,28:30:81.26:1063,81,0	1/1:2,15:17:45.15:591,45,0	1/1:1,29:30:75.24:987,75,0	1/1:0,16:16:36.12:474,36,0	1/1:2,25:27:75.24:986,75,0	1/1:1,18:19:42.14:553,42,0	1/1:0,11:11:30.10:395,30,0
chr10	93397284	.	CA	C	5667.76	PASS	AB=0.847;AC=31;AF=0.554;AN=56;BaseQRankSum=-1.217;DP=569;FS=0.379;HRun=12;HaplotypeScore=69.2634;InbreedingCoeff=0.7824;MQ=75.27;MQ0=0;MQRankSum=2.731;QD=15.66;ReadPosRankSum=0.333;VQSLOD=5.6538;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:20:23.35:364,23,0	1/1:1,10:11:26.90:209,27,0	0/0:16,0:12:11.99:0,12,112	0/1:18,0:15:8.08:8,0,49	1/1:1,30:31:86.64:673,87,0	0/0:15,0:20:26.93:0,27,177	0/0:4,0:16:14.33:0,14,77	1/1:4,23:27:65.53:501,66,0	1/1:4,15:20:32.38:357,32,0	1/1:1,23:25:66.83:499,67,0	1/1:6,15:21:17.37:318,17,0	0/0:20,0:20:17.42:0,17,312	0/0:16,0:17:35.87:0,36,339	0/1:9,1:10:3.82:4,0,128	1/1:5,25:31:3.90:386,4,0	1/1:4,17:23:38.94:288,39,0	0/0:2,0:15:17.21:0,17,103	1/1:7,22:29:59.76:464,60,0	1/1:2,11:13:32.87:255,33,0	1/1:5,20:25:50.76:395,51,0	0/1:5,7:12:33.10:137,0,33	0/0:25,0:26:62.96:0,63,619	0/0:22,0:23:58.18:0,58,554	0/0:18,1:19:27.66:0,28,447	0/0:17,0:18:35.91:0,36,349	1/1:4,20:24:59.72:460,60,0	1/1:9,13:22:50.30:350,50,0	0/0:5,0:16:28.46:0,28,151
chr10	93397363	.	C	CTT	5392.86	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-5.171;DP=590;FS=3.232;HRun=9;HaplotypeScore=81.9822;InbreedingCoeff=0.9157;MQ=79.59;MQ0=0;MQRankSum=-0.844;QD=28.53;ReadPosRankSum=2.475;VQSLOD=5.2020;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.18:0,72,765	0/0:13,0:13:39.10:0,39,414	0/0:22,0:21:5.62:0,6,201	0/1:16,0:15:0.64:1,0,243	0/0:23,0:23:42.33:0,42,581	1/1:1,12:14:26.58:378,27,0	1/1:1,18:22:47.13:640,47,0	0/0:31,0:32:19.06:0,19,590	0/0:23,0:23:60.13:0,60,630	0/0:26,0:27:61.34:0,61,697	0/0:17,0:17:39.07:0,39,408	1/1:4,24:29:73.21:1025,73,0	1/1:3,16:20:4.19:467,4,0	1/1:1,13:14:39.09:574,39,0	0/0:28,0:28:66:0,66,678	0/0:26,0:26:54.05:0,54,557	0/0:14,0:14:38.31:0,38,390	0/0:27,0:27:60.09:0,60,630	0/0:29,0:29:72.12:0,72,760	0/0:20,0:21:50.75:0,51,499	0/0:15,0:15:36.08:0,36,383	1/1:6,16:23:47.83:704,48,0	1/1:3,13:16:33.11:508,33,0	1/1:4,11:15:39.13:598,39,0	1/1:1,14:20:40.59:499,41,0	0/0:25,0:25:63:0,63,654	0/0:19,0:20:42.89:0,43,493	0/0:15,0:15:39.04:0,39,402
chr10	93398082	.	GA	G	10971.81	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=17.284;DP=601;FS=7.959;HRun=7;HaplotypeScore=95.6660;InbreedingCoeff=0.9966;MQ=79.95;MQ0=0;MQRankSum=0.264;QD=29.98;ReadPosRankSum=2.047;VQSLOD=4.7243;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,35:36:90.26:1020,90,0	1/1:0,5:5:15.04:170,15,0	0/0:20,0:20:48.11:0,48,621	0/0:12,0:12:20.30:0,20,278	1/1:1,24:25:72.20:814,72,0	0/0:36,0:36:99:0,102,1393	0/0:19,0:19:57.17:0,57,761	1/1:1,22:23:63.14:692,63,0	1/1:0,17:17:42.12:476,42,0	1/1:2,31:33:93.26:1051,93,0	1/1:0,15:15:39.11:442,39,0	0/0:20,0:20:57.19:0,57,779	0/0:25,0:25:75.24:0,75,1005	0/0:16,0:16:45.15:0,45,614	1/1:2,18:20:51.15:578,51,0	1/1:1,19:20:51.15:579,51,0	1/1:0,27:27:75.21:851,75,0	1/1:0,12:12:30.09:340,30,0	1/1:1,26:27:78.21:873,78,0	1/1:0,25:25:69.19:775,69,0	1/1:0,23:23:51.15:578,51,0	0/0:21,0:21:57.16:0,57,733	0/0:29,0:29:81.27:0,81,1106	0/0:19,0:19:51.17:0,51,698	0/0:18,0:18:51.16:0,51,681	1/1:1,28:29:84.24:951,84,0	1/1:2,18:20:45.13:510,45,0	1/1:0,9:9:24.07:272,24,0
chr10	93398864	.	ATGTGTG	A	3207.92	PASS	AB=0.814;AC=16;AF=0.286;AN=56;BaseQRankSum=-0.576;DP=583;FS=3.445;HRun=0;HaplotypeScore=181.2247;InbreedingCoeff=0.7007;MQ=68.11;MQ0=10;MQRankSum=2.187;QD=18.65;ReadPosRankSum=3.727;VQSLOD=3.2615;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:5.95:0,6,96	0/0:9,0:9:6.02:0,6,146	0/0:33,0:23:18.06:0,18,468	0/0:28,0:24:12.02:0,12,239	0/0:19,0:18:3.15:0,3,26	0/1:14,0:18:57.83:307,0,58	1/1:20,1:24:24.06:380,24,0	0/0:21,0:21:24.08:0,24,518	0/0:16,0:16:8.39:0,8,222	0/0:35,0:41:70.47:0,70,1563	0/0:15,0:13:9.02:0,9,138	1/1:8,5:15:24.08:435,24,0	0/1:13,2:17:15.80:426,0,16	1/1:18,5:24:21.07:401,21,0	0/0:24,0:21:9.01:0,9,120	0/0:20,0:19:24.08:0,24,529	0/0:20,0:21:36.01:0,36,406	0/0:10,0:14:9.03:0,9,176	0/0:17,0:16:21.02:0,21,327	0/0:16,0:12:6.01:0,6,85	0/0:24,0:25:12.03:0,12,224	1/1:10,0:13:21.06:370,21,0	1/1:11,8:19:19.28:328,19,0	1/1:19,4:23:14.99:272,15,0	1/1:11,7:16:27.09:484,27,0	0/0:35,0:34:60.14:0,60,1318	0/0:18,0:16:31.66:0,32,643	0/0:10,0:10:16.30:0,16,391
chr10	93398910	.	GAC	G	1466.06	PASS	AB=0.982;AC=41;AF=0.759;AN=54;BaseQRankSum=1.772;DP=495;FS=10.805;HRun=0;HaplotypeScore=174.2165;InbreedingCoeff=0.1437;MQ=35.50;MQ0=30;MQRankSum=-5.468;QD=3.58;ReadPosRankSum=3.607;VQSLOD=2.1966;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:12:0:0,0,0	1/1:2,0:2:5.94:41,6,0	./.	0/0:41,0:5:4.82:0,5,72	1/1:11,2:11:0.52:2,1,0	1/1:22,0:22:7.52:72,8,0	1/1:22,0:22:8.98:44,9,0	1/1:19,0:16:38.07:258,38,0	1/1:9,0:9:4.23:15,4,0	1/1:15,1:13:23.35:142,23,0	1/1:6,0:5:0.47:1,0,0	0/1:19,2:18:38.56:39,0,109	0/1:26,0:26:23.67:24,0,251	0/1:22,1:22:17.43:17,0,165	0/0:16,1:16:20.83:0,21,172	1/1:16,0:15:18.46:101,18,0	0/1:18,0:17:41.22:47,0,41	1/1:10,1:11:11.56:69,12,0	1/1:10,1:8:10.98:78,11,0	1/1:9,1:5:1.82:5,2,0	0/1:7,0:7:0:0,0,0	1/1:20,0:17:8.35:59,8,0	0/1:25,1:25:45.50:46,0,49	0/1:30,0:28:22.71:23,0,167	0/1:22,0:20:3.15:55,0,3	1/1:8,4:11:27.18:224,27,0	1/1:20,4:21:23.43:157,23,0	1/1:8,1:8:14.54:93,15,0
chr10	93398918	.	GAA	G	1273.25	PASS	AB=1.000;AC=36;AF=0.667;AN=54;BaseQRankSum=-0.799;DP=505;FS=4.414;HRun=3;HaplotypeScore=178.0663;InbreedingCoeff=0.2098;MQ=36.07;MQ0=31;MQRankSum=-3.955;QD=3.69;ReadPosRankSum=3.335;VQSLOD=0.1101;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:0.89:0,1,2	1/1:2,0:2:5.93:40,6,0	./.	0/0:44,0:5:0.73:0,1,56	1/1:12,2:12:3.41:25,3,0	1/1:20,0:20:0.15:30,0,0	0/1:21,0:21:12.41:12,0,29	1/1:21,0:18:9.38:221,9,0	1/1:9,0:9:2.68:11,3,0	1/1:13,0:12:25.95:169,26,0	1/1:6,0:5:0.47:1,0,0	0/1:21,0:18:31.26:31,0,277	0/1:26,0:26:17.90:18,0,764	0/1:24,0:23:2.67:3,0,467	0/0:18,1:18:23.91:0,24,256	1/1:21,0:20:16.54:98,17,0	0/1:20,0:19:60.67:76,0,61	1/1:10,1:11:12.11:70,12,0	1/1:11,1:8:12.31:88,12,0	1/1:9,1:5:2.50:9,2,0	0/1:8,0:8:0:0,0,0	0/1:22,0:19:11.49:11,0,63	0/0:23,0:22:2.38:0,2,90	0/0:29,0:27:22.23:0,22,428	0/1:20,0:18:3.83:4,0,103	1/1:7,3:9:24.20:202,24,0	1/1:20,2:19:24.41:164,24,0	1/1:12,0:11:20.84:142,21,0
chr10	93398920	.	AAGAGAGAG	A	300.32	PASS	AB=0.965;AC=10;AF=0.179;AN=56;BaseQRankSum=-2.195;DP=505;FS=0.726;HRun=0;HaplotypeScore=200.3300;InbreedingCoeff=-0.0224;MQ=36.50;MQ0=25;MQRankSum=-4.929;QD=2.52;ReadPosRankSum=1.475;VQSLOD=2.4788;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:13:0.13:0,0,0	0/0:3,0:3:8.87:0,9,61	0/0:33,0:2:3.01:0,3,32	0/0:43,0:5:8.48:0,8,64	0/0:13,0:12:3.19:0,3,25	0/1:18,0:18:4.16:4,0,21	0/0:23,0:23:0.93:0,1,76	0/1:24,0:21:99:177,0,129	0/0:9,0:9:2.96:0,3,19	0/1:12,0:11:52.23:52,0,210	1/1:7,0:5:0.89:2,1,0	0/0:22,0:19:15.90:0,16,634	0/0:25,0:25:47.92:0,48,1236	0/0:24,0:23:43.02:0,43,849	0/0:19,0:18:21.87:0,22,342	0/0:19,0:18:4.69:0,5,252	0/0:23,0:22:25.66:0,26,265	0/1:11,0:11:43.74:44,0,122	0/1:8,5:9:17.90:123,0,18	0/1:10,0:5:10.94:11,0,12	0/0:8,0:8:0.47:0,0,1	0/0:20,0:17:8.88:0,9,130	0/0:20,0:19:18.25:0,18,202	0/0:28,0:26:38.53:0,39,837	0/0:19,0:17:13.25:0,13,172	0/1:10,0:10:3.54:4,0,156	0/0:23,0:20:31.75:0,32,209	0/0:12,0:11:18.38:0,18,162
chr10	93398928	.	GAC	G	1064.67	PASS	AB=0.988;AC=27;AF=0.482;AN=56;BaseQRankSum=-2.072;DP=499;FS=4.343;HRun=0;HaplotypeScore=168.0814;InbreedingCoeff=0.0494;MQ=41.64;MQ0=17;MQRankSum=-1.715;QD=3.14;ReadPosRankSum=-3.178;VQSLOD=1.7456;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:2.99:0,3,24	0/1:3,0:3:11.55:12,0,49	1/1:26,0:3:2.70:12,3,0	0/1:41,0:8:0.34:0,0,52	1/1:13,0:11:3.52:26,4,0	0/1:20,0:20:13.42:13,0,31	0/1:22,0:22:4.72:5,0,69	0/1:26,0:23:46.53:130,0,47	1/1:10,0:10:5.93:41,6,0	0/1:13,0:12:72.21:110,0,72	1/1:5,0:3:0.47:1,0,0	0/0:20,0:17:12.75:0,13,367	0/1:27,0:27:2.19:2,0,790	0/0:27,0:26:35.80:0,36,605	0/0:17,0:16:29.97:0,30,557	1/1:18,0:17:16.51:90,17,0	0/1:25,0:24:28.25:111,0,28	0/1:11,1:12:6.57:74,0,7	0/1:11,1:8:36.60:37,0,96	0/1:10,0:5:7.42:26,0,7	0/1:7,0:7:0:0,0,0	0/0:18,0:15:8.79:0,9,119	0/0:17,0:16:5.19:0,5,95	0/0:28,0:27:37.69:0,38,535	0/0:18,0:16:12.42:0,12,134	1/1:11,2:13:0.71:271,1,0	0/1:23,0:20:8.31:129,0,8	1/1:12,0:10:18.96:131,19,0
chr10	93398940	.	C	CAGAG	3838.39	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-5.802;DP=495;FS=0.557;HRun=0;HaplotypeScore=149.0670;InbreedingCoeff=0.7070;MQ=53.19;MQ0=14;MQRankSum=-0.833;QD=14.76;ReadPosRankSum=3.535;VQSLOD=3.3497;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:10:2.19:0,2,49	0/0:3,0:3:9.01:0,9,122	0/0:27,0:7:2.94:0,3,18	0/1:43,0:14:5.66:16,0,6	0/0:11,0:9:5.75:0,6,41	1/1:5,0:19:8.82:90,9,0	1/1:10,17:30:17.06:383,17,0	0/0:24,0:21:34.54:0,35,351	0/0:11,0:11:14.71:0,15,107	0/0:12,0:12:15:0,15,163	0/0:5,0:3:3.40:0,3,18	1/1:17,0:14:23.87:461,24,0	1/1:24,0:25:42.62:824,43,0	1/1:27,0:26:38.03:706,38,0	0/0:19,0:18:33.11:0,33,539	0/0:20,0:19:46.37:0,46,520	1/1:23,0:22:19.36:100,19,0	0/0:14,0:14:11.46:0,11,172	0/0:15,0:14:9.49:0,9,179	0/0:10,0:6:0.77:0,1,43	0/0:7,0:7:2.27:0,2,44	1/1:18,0:15:8.81:188,9,0	1/1:14,0:13:9.03:182,9,0	1/1:28,0:27:34.53:693,35,0	1/1:16,0:14:6.75:194,7,0	0/0:13,0:13:19.40:0,19,432	0/0:21,0:20:19.40:0,19,359	0/0:12,0:11:5.01:0,5,144
chr10	93398946	.	G	GAGAC	4741.15	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-7.042;DP=513;FS=9.097;HRun=0;HaplotypeScore=147.0779;InbreedingCoeff=0.6235;MQ=58.19;MQ0=12;MQRankSum=1.047;QD=19.27;ReadPosRankSum=7.759;VQSLOD=2.9281;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:10:5.16:0,5,49	0/0:4,0:4:9.02:0,9,107	0/0:29,0:9:11.09:0,11,114	0/1:46,0:19:13.13:13,0,100	0/0:13,0:12:8.81:0,9,82	0/1:18,0:18:15.41:44,0,15	0/1:28,0:28:26.35:237,0,26	0/0:21,0:21:47.59:0,48,390	0/0:14,0:14:26.97:0,27,254	0/0:11,0:11:29.26:0,29,227	0/0:5,0:3:6.42:0,6,51	1/1:5,12:16:15.25:626,15,0	1/1:6,18:25:47.27:1166,47,0	1/1:5,23:28:40.04:962,40,0	0/0:21,0:20:39:0,39,344	0/0:21,0:20:50.98:0,51,488	0/0:23,0:22:41.44:0,41,267	0/0:14,0:14:17.63:0,18,184	0/0:15,0:14:32.73:0,33,259	0/0:9,0:6:6.52:0,7,65	0/0:8,0:8:5.25:0,5,50	1/1:8,10:16:8.81:240,9,0	1/1:4,12:15:9.03:242,9,0	1/1:9,19:29:38.56:975,39,0	1/1:12,5:15:6.62:236,7,0	0/0:14,0:14:39.06:0,39,414	0/0:21,0:20:48.19:0,48,412	0/0:12,0:11:12.32:0,12,208
chr10	93399961	.	TGTGTGGTGTGTGTGTGTGTGTGTTTTGAGAAA	T	1079.27	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.205;DP=897;FS=0.000;HRun=0;HaplotypeScore=670.0843;InbreedingCoeff=0.9684;MQ=73.48;MQ0=13;MQRankSum=-2.974;QD=154.18;ReadPosRankSum=0.390;VQSLOD=2.1870;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,12426	0/0:12,0:12:36.12:0,36,4197	0/0:78,0:41:99:0,116,5535	0/0:59,0:32:79.67:0,80,4044	0/0:31,0:30:87.30:0,87,9698	0/0:19,0:19:45.15:0,45,5493	0/0:38,0:38:99:0,105,11006	0/0:29,0:29:87.28:0,87,6125	0/0:35,0:35:93.32:0,93,11456	0/0:33,0:33:96.32:0,96,9816	0/0:21,0:21:63.20:0,63,6129	0/0:38,0:38:99:0,99,11272	0/0:35,0:35:87.75:0,88,7636	0/0:25,0:25:72.25:0,72,8060	0/0:29,0:29:66.21:0,66,7953	0/0:32,0:32:87.30:0,87,10231	1/1:0,7:7:15.05:1168,15,0	0/0:28,0:28:75.26:0,75,9071	0/0:23,0:23:69.24:0,69,5452	0/0:28,0:28:84.29:0,84,8358	0/0:53,0:52:99:0,144,14971	0/0:34,0:34:99:0,102,10602	0/0:25,0:25:72.25:0,72,8501	0/0:51,0:50:99:0,129,12777	0/0:28,0:28:66.23:0,66,7753	0/0:34,0:34:99:0,102,11188	0/0:23,0:23:60.21:0,60,6753	0/0:5,0:5:15.05:0,15,1472
chr10	93399966	.	GGT	G	18556.41	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-5.482;DP=878;FS=13.152;HRun=0;HaplotypeScore=120.2855;InbreedingCoeff=0.5937;MQ=71.52;MQ0=13;MQRankSum=1.117;QD=22.63;ReadPosRankSum=5.251;VQSLOD=4.8439;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,35:42:84.26:1027,84,0	1/1:1,12:13:30.09:367,30,0	0/1:78,0:40:23.11:23,0,301	0/0:57,0:30:22.66:0,23,347	1/1:7,24:30:63.20:770,63,0	1/1:2,17:19:39.12:477,39,0	1/1:12,27:39:66.21:803,66,0	1/1:10,17:27:54.10:621,54,0	1/1:2,33:35:84.26:1027,84,0	1/1:4,27:31:75.20:884,75,0	1/1:5,15:21:38.91:437,39,0	1/1:4,34:38:86.08:1031,86,0	1/1:8,25:33:48.02:587,48,0	1/1:6,19:25:54.17:660,54,0	1/1:1,29:30:60.19:733,60,0	1/1:5,27:32:74.44:887,74,0	1/1:7,0:7:8.38:42,8,0	1/1:3,26:29:66.21:807,66,0	1/1:6,17:23:51.11:584,51,0	1/1:6,21:27:57.10:664,57,0	1/1:10,38:47:96.30:1173,96,0	1/1:12,23:35:63.20:770,63,0	1/1:2,23:25:63.20:770,63,0	1/1:6,37:44:90.23:1100,90,0	1/1:4,23:27:54.17:660,54,0	1/1:3,30:33:89.58:1030,90,0	1/1:5,18:23:42.13:513,42,0	1/1:1,3:4:9.03:110,9,0
chr10	93400362	.	C	CT	5395.62	PASS	AB=0.611;AC=23;AF=0.411;AN=56;BaseQRankSum=-12.558;DP=577;FS=0.000;HRun=8;HaplotypeScore=60.0791;InbreedingCoeff=0.9397;MQ=62.55;MQ0=11;MQRankSum=-1.498;QD=22.39;ReadPosRankSum=-0.037;VQSLOD=4.9086;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,114,1043	0/0:10,0:10:24.01:0,24,219	0/0:25,0:10:8.84:0,9,82	0/0:24,0:14:17.37:0,17,132	1/1:3,17:21:41.91:450,42,0	0/0:25,0:25:66.03:0,66,604	0/0:19,0:19:36.89:0,37,330	1/1:5,14:19:42.11:474,42,0	1/1:5,12:17:33.10:381,33,0	1/1:10,11:21:11.64:386,12,0	1/1:4,13:17:39.06:430,39,0	0/0:18,0:18:48.01:0,48,435	0/0:21,0:21:48.01:0,48,439	0/0:16,0:16:36.01:0,36,329	0/0:12,0:12:27.01:0,27,247	1/1:2,14:16:39.12:450,39,0	0/0:26,0:25:66.03:0,66,604	1/1:2,18:20:45.13:519,45,0	1/1:10,12:22:33.10:379,33,0	1/1:4,22:26:23.82:522,24,0	1/1:3,18:21:39.12:450,39,0	0/0:10,0:10:24.01:0,24,220	0/0:18,0:18:41.98:0,42,374	0/0:37,0:37:89.99:0,90,817	0/0:19,0:19:51.02:0,51,466	0/1:8,14:22:0.87:437,0,1	1/1:2,17:19:45.13:518,45,0	0/0:6,0:5:12.01:0,12,110
chr10	93401004	.	TCA	T	54.46	PASS	AB=0.972;AC=11;AF=0.204;AN=54;BaseQRankSum=3.674;DP=906;FS=1.469;HRun=0;HaplotypeScore=222.5955;InbreedingCoeff=-0.1020;MQ=37.42;MQ0=32;MQRankSum=-1.479;QD=0.19;ReadPosRankSum=-2.981;VQSLOD=2.5138;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:27:4.15:4,0,14	0/1:7,0:5:6.39:8,0,6	0/0:44,1:14:15.41:0,15,207	0/0:57,0:24:14.98:0,15,259	0/0:18,0:16:3.92:0,4,48	0/0:38,0:34:22.43:0,22,418	0/1:49,1:45:1.57:2,0,441	0/0:27,0:23:10.64:0,11,330	0/0:35,0:27:18.63:0,19,371	0/1:32,2:26:31.49:31,0,449	./.	0/0:45,0:33:6.38:0,6,405	0/0:16,0:11:12.33:0,12,107	0/0:41,1:36:18.47:0,18,337	0/1:28,0:22:4.68:58,0,5	0/0:24,0:20:24.25:0,24,363	0/0:25,0:18:7.63:0,8,49	0/1:37,1:34:19.85:20,0,358	0/1:15,1:13:12.58:13,0,234	0/0:25,0:25:5.26:0,5,126	0/0:128,0:81:0.05:0,0,498	1/1:20,0:18:0.46:1,0,0	0/0:14,0:11:3.01:0,3,47	0/1:48,0:42:19.58:20,0,90	0/0:18,0:15:5.14:0,5,83	0/0:35,0:23:48.75:0,49,595	0/0:23,0:19:39.20:0,39,413	0/1:9,1:10:21.86:22,0,119
chr10	93401022	.	ACAC	A	338.22	PASS	AB=0.950;AC=10;AF=0.179;AN=56;BaseQRankSum=6.583;DP=1326;FS=5.346;HRun=0;HaplotypeScore=284.4146;InbreedingCoeff=0.0154;MQ=31.94;MQ0=121;MQRankSum=-4.775;QD=1.30;ReadPosRankSum=-3.873;VQSLOD=1.5645;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,2:32:66.09:75,0,66	0/1:14,2:12:32.61:118,0,33	0/0:54,0:8:19.28:0,19,308	0/0:69,0:19:40.82:0,41,481	0/1:25,0:21:1.01:1,0,39	0/0:48,0:40:2.01:0,2,430	0/0:85,0:68:31.63:0,32,687	0/0:54,0:33:35.95:0,36,729	0/0:52,0:36:6.80:0,7,493	0/0:62,0:42:47.48:0,47,1178	1/1:13,0:11:1.82:5,2,0	0/0:60,0:37:28.02:0,28,522	0/1:28,0:19:10.80:11,0,195	0/0:57,0:44:29.39:0,29,481	0/1:40,8:35:83.99:235,0,84	0/0:39,0:33:37.26:0,37,626	0/0:36,0:24:10.03:0,10,224	0/0:39,0:33:17.29:0,17,583	0/0:44,0:18:29.87:0,30,411	0/0:25,0:24:10.53:0,11,231	0/0:194,0:120:54.18:0,54,789	1/1:23,0:18:0.17:0,0,0	0/0:13,0:9:2.81:0,3,40	0/1:65,0:47:7.67:8,0,103	0/0:37,0:31:10.13:0,10,151	0/0:62,0:36:27.21:0,27,1047	0/0:25,0:19:24.33:0,24,527	0/0:8,0:8:0.14:0,0,123
chr10	93401035	.	ACAC	A	2327.31	PASS	AB=0.960;AC=23;AF=0.411;AN=56;BaseQRankSum=6.308;DP=1369;FS=8.711;HRun=0;HaplotypeScore=280.9598;InbreedingCoeff=-0.4079;MQ=29.54;MQ0=155;MQRankSum=-4.650;QD=2.12;ReadPosRankSum=0.079;VQSLOD=1.0874;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:32:9.12:9,0,161	0/1:18,0:14:7.20:7,0,159	0/0:48,0:8:17.80:0,18,273	0/0:72,0:12:17.99:0,18,297	0/0:31,1:29:4.43:0,4,67	0/1:42,2:37:89.76:100,0,90	0/1:88,4:72:99:140,0,326	0/1:63,2:35:7.45:7,0,861	0/0:56,0:41:12.61:0,13,249	0/1:67,1:46:99:113,0,601	0/0:11,0:10:5.93:0,6,84	1/1:42,14:34:34.02:584,34,0	0/1:25,4:22:88.50:212,0,88	0/1:39,16:40:16.90:465,0,17	0/1:44,0:34:99:151,0,124	0/0:36,0:29:18.60:0,19,270	0/1:30,0:21:0.92:1,0,88	0/1:36,1:31:99:258,0,227	0/1:49,1:14:69.64:119,0,70	0/1:25,0:23:7.03:7,0,194	0/1:186,5:123:3.90:4,0,511	1/1:17,3:14:0.52:1,1,0	0/0:13,1:9:0.37:0,0,1	0/1:51,8:42:43.69:87,0,44	0/1:35,5:33:34.55:104,0,35	0/1:62,0:32:21.35:21,0,714	0/1:26,0:19:34.84:35,0,80	0/1:10,0:9:52.78:53,0,88
chr10	93401037	.	AC	A	4021.33	PASS	AB=0.836;AC=22;AF=0.393;AN=56;BaseQRankSum=6.777;DP=1373;FS=94.865;HRun=2;HaplotypeScore=268.5764;InbreedingCoeff=-0.5477;MQ=29.35;MQ0=157;MQRankSum=-6.663;QD=3.51;ReadPosRankSum=3.911;VQSLOD=-0.1278;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:41,5:33:54.82:55,0,114	0/1:17,1:14:57.06:57,0,149	0/0:49,0:8:15.24:0,15,212	0/0:72,0:11:18.01:0,18,239	0/0:23,7:27:4.73:0,5,90	0/1:34,15:40:29.74:365,0,30	0/1:75,14:68:99:181,0,291	0/1:63,6:37:99:104,0,738	0/1:37,17:40:99:253,0,203	0/1:58,13:46:99:390,0,457	0/0:9,1:10:6.02:0,6,85	1/1:50,6:33:9.86:277,10,0	0/1:25,6:21:98.69:99,0,154	0/1:51,4:40:59.09:292,0,59	0/1:34,9:34:98.10:209,0,98	0/1:26,11:31:99:296,0,153	0/0:27,4:21:16.21:0,16,157	0/1:27,10:31:99:285,0,199	0/1:49,4:16:99:146,0,118	0/1:17,6:21:98.08:98,0,135	0/1:170,30:123:99:127,0,417	0/0:19,1:13:0.46:0,0,1	0/0:10,4:9:0.35:0,0,1	0/1:55,11:44:36.42:41,0,36	0/1:35,7:33:32.40:115,0,32	0/1:47,14:31:99:280,0,575	0/1:18,8:19:27.24:222,0,27	0/1:6,4:9:70.69:130,0,71
chr10	93401040	.	ACAC	A	1702.29	PASS	AB=0.977;AC=21;AF=0.375;AN=56;BaseQRankSum=10.493;DP=1358;FS=8.698;HRun=0;HaplotypeScore=286.6165;InbreedingCoeff=-0.4876;MQ=28.56;MQ0=159;MQRankSum=-5.982;QD=1.58;ReadPosRankSum=2.065;VQSLOD=1.1243;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:47,1:36:21.29:21,0,219	0/1:15,1:13:21.44:21,0,218	0/0:45,0:6:18.01:0,18,270	0/0:69,0:8:17.73:0,18,286	0/0:30,0:27:6.41:0,6,133	0/1:48,1:39:99:138,0,193	0/1:84,6:70:99:150,0,590	0/0:73,0:40:53.51:0,54,1335	0/1:56,0:40:18.13:18,0,402	0/1:72,0:44:50.24:50,0,627	0/0:9,0:8:6.02:0,6,110	1/1:55,1:33:15.45:162,15,0	0/1:31,0:21:75.62:76,0,156	0/1:56,0:41:20.64:243,0,21	0/1:42,1:34:99:242,0,119	0/1:34,1:29:22.11:22,0,335	0/1:28,1:20:60.52:167,0,61	0/1:35,2:31:99:227,0,317	0/1:47,1:15:98.04:98,0,201	0/0:23,0:20:12.22:0,12,295	0/1:194,4:121:10.28:10,0,727	0/0:21,0:13:2.80:0,3,19	0/0:13,0:8:0.37:0,0,1	0/1:69,0:44:44.06:44,0,68	0/1:43,1:34:27.95:28,0,58	0/1:57,2:29:66.16:66,0,935	0/1:22,1:16:46.76:47,0,118	0/1:10,0:9:28.18:28,0,158
chr10	93401042	.	AC	A	1933.16	PASS	AB=0.863;AC=20;AF=0.357;AN=56;BaseQRankSum=10.464;DP=1369;FS=3.734;HRun=2;HaplotypeScore=278.3070;InbreedingCoeff=-0.4424;MQ=28.38;MQ0=165;MQRankSum=-6.234;QD=2.20;ReadPosRankSum=2.721;VQSLOD=-0.4617;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,8:37:14.13:14,0,196	0/1:16,2:14:42.50:43,0,142	0/0:46,0:6:17.65:0,18,216	0/0:68,0:8:17.87:0,18,214	0/0:29,1:27:7.10:0,7,119	0/1:44,6:40:31.50:31,0,202	0/1:76,15:70:99:125,0,478	0/0:72,3:41:54.34:0,54,1049	0/1:45,10:40:16.88:17,0,369	0/1:62,5:42:98.96:99,0,538	0/0:10,1:9:6.02:0,6,80	1/1:49,6:32:18.76:223,19,0	0/1:22,10:21:99:182,0,145	0/1:49,8:41:28.65:312,0,29	0/1:29,15:34:60.98:219,0,61	0/1:34,4:31:16.01:16,0,350	0/1:21,7:19:41.55:204,0,42	0/1:29,7:29:99:212,0,268	0/1:45,3:14:63.91:64,0,145	0/0:20,2:19:14.55:0,15,226	0/0:174,28:121:24.70:0,25,584	0/0:19,2:13:3.44:0,3,21	0/0:14,1:10:2.07:0,2,7	0/1:61,6:42:46.79:47,0,52	0/1:38,5:34:45.49:75,0,45	0/1:54,5:30:59.97:60,0,735	0/1:18,5:16:99:118,0,114	0/1:8,2:9:33.44:33,0,142
chr10	93401047	.	ACAC	A	1317.12	PASS	AB=0.981;AC=22;AF=0.393;AN=56;BaseQRankSum=8.258;DP=1427;FS=7.548;HRun=0;HaplotypeScore=306.9095;InbreedingCoeff=-0.5502;MQ=27.97;MQ0=168;MQRankSum=-5.507;QD=1.36;ReadPosRankSum=-1.383;VQSLOD=1.1772;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:50,2:37:13.59:14,0,327	0/1:20,0:15:25.86:26,0,191	0/0:45,0:4:7.27:0,7,139	0/0:60,0:7:17.61:0,18,258	0/1:35,0:31:16.44:16,0,178	0/1:51,0:42:99:102,0,180	0/1:94,2:73:99:179,0,702	0/0:79,2:46:58.87:0,59,1422	0/1:57,1:38:2.16:2,0,398	0/1:73,0:45:11.61:12,0,776	0/0:14,0:12:5.84:0,6,132	0/1:54,0:32:32.05:86,0,32	0/1:33,0:22:77.43:77,0,227	0/1:59,2:43:27.62:252,0,28	0/1:45,0:35:99:210,0,150	0/1:39,0:32:74.78:75,0,303	0/1:27,3:20:99:122,0,120	0/1:37,1:31:81.82:82,0,361	0/1:45,2:14:24.58:25,0,255	0/0:25,0:21:3.83:0,4,305	0/0:192,18:126:20.92:0,21,816	0/0:23,1:15:10.66:0,11,109	1/1:18,0:13:1.70:8,2,0	0/1:63,6:43:56.74:57,0,60	0/1:46,1:37:25.50:26,0,59	0/1:58,0:31:33.25:33,0,879	0/1:21,0:15:46.60:47,0,112	0/1:13,0:10:21.86:22,0,108
chr10	93401134	.	ACACACAC	A	527.13	PASS	AB=0.990;AC=15;AF=0.288;AN=52;BaseQRankSum=6.565;DP=1753;DS;FS=23.817;HRun=0;HaplotypeScore=382.1668;InbreedingCoeff=-0.2592;MQ=24.51;MQ0=332;MQRankSum=-5.739;QD=0.56;ReadPosRankSum=-4.791;VQSLOD=0.6107;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:70,0:46:43.56:0,44,672	1/1:18,0:11:4.29:48,4,0	./.	./.	0/0:43,1:34:23.62:0,24,338	0/0:66,1:44:31.78:0,32,851	0/0:155,2:105:43.87:0,44,1772	0/1:94,0:23:22.42:22,0,276	0/1:69,0:50:23.01:23,0,765	0/1:84,0:49:27.53:28,0,583	0/0:24,0:18:7.69:0,8,378	0/1:79,0:43:32.02:32,0,315	0/1:56,1:31:94.03:94,0,332	0/1:66,0:46:21.65:22,0,138	0/1:63,0:37:9.38:9,0,203	0/1:55,2:32:99:149,0,616	0/0:60,0:36:8.93:0,9,681	0/1:65,0:46:5.23:5,0,1419	0/0:54,0:19:19.86:0,20,434	0/0:23,0:17:14.99:0,15,203	0/0:222,0:140:64.56:0,65,1513	0/0:38,0:26:9.55:0,10,97	0/1:27,0:19:22.62:23,0,97	0/1:106,1:70:66.30:66,0,204	0/1:63,1:38:99:112,0,258	0/1:83,0:43:45.75:46,0,693	0/0:30,0:19:28.39:0,28,380	0/0:23,0:21:41.32:0,41,796
chr10	93401183	.	CCA	C	4232.72	PASS	AB=0.928;AC=28;AF=0.519;AN=54;BaseQRankSum=-4.627;DP=1592;DS;FS=61.155;HRun=0;HaplotypeScore=271.3550;InbreedingCoeff=-0.4724;MQ=26.99;MQ0=284;MQRankSum=4.565;QD=3.24;ReadPosRankSum=3.681;VQSLOD=1.8555;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:49,12:39:51.11:310,0,51	0/1:17,0:12:3.73:4,0,15	./.	0/0:49,0:3:8.19:0,8,51	0/1:28,4:18:19.76:139,0,20	0/0:51,0:37:33.43:0,33,496	0/0:136,1:95:8.69:0,9,1295	0/1:98,5:37:99:133,0,337	0/1:38,3:29:34.83:177,0,35	0/1:61,4:31:99:180,0,212	1/1:16,5:14:21.05:270,21,0	0/1:53,5:27:37.50:81,0,38	0/1:44,8:35:39.41:211,0,39	0/1:53,4:37:8.31:48,0,8	0/1:44,2:27:46.37:61,0,46	0/1:39,5:26:65.22:240,0,65	0/1:48,0:29:25.51:26,0,152	0/1:48,8:38:99:388,0,220	0/1:56,2:17:99:121,0,138	1/1:24,3:15:11.70:154,12,0	1/1:194,25:143:59.93:1101,60,0	1/1:39,2:27:5.40:52,5,0	0/1:25,2:17:29.67:30,0,60	0/1:69,4:47:19.38:144,0,19	0/1:45,3:33:51.27:53,0,51	0/1:57,2:30:99:140,0,157	0/1:19,1:11:5.24:37,0,5	0/1:20,4:16:49.95:135,0,50
chr10	93401194	.	CAT	C	2330.70	PASS	AB=0.961;AC=31;AF=0.574;AN=54;BaseQRankSum=2.133;DP=1304;DS;FS=2.943;HRun=0;HaplotypeScore=241.8874;InbreedingCoeff=-0.4662;MQ=29.06;MQ0=164;MQRankSum=-0.476;QD=2.09;ReadPosRankSum=4.389;VQSLOD=2.3868;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:46,3:34:95.80:123,0,96	1/1:13,0:9:3.26:14,3,0	./.	0/0:71,0:4:10.99:0,11,75	0/1:23,0:13:46.52:47,0,47	0/0:41,0:28:29.70:0,30,634	0/1:113,5:90:99:100,0,1453	0/1:72,0:32:61.94:62,0,348	0/1:27,3:20:33.44:108,0,33	0/1:41,2:25:99:107,0,157	0/1:18,0:11:1.77:89,0,2	0/1:40,2:24:18.85:62,0,19	1/1:36,3:30:8.30:256,8,0	1/1:45,1:29:4.70:79,5,0	1/1:32,2:19:5.14:38,5,0	0/1:34,0:19:39.78:83,0,40	0/1:35,4:24:36.80:114,0,37	0/1:40,1:32:75.12:213,0,75	0/1:45,0:19:28.96:29,0,110	0/1:22,0:15:20.27:53,0,20	0/1:169,11:127:6.39:496,0,6	1/1:29,1:20:3.19:17,3,0	0/1:20,1:15:5.76:6,0,47	1/1:51,6:41:9.64:130,10,0	0/1:37,2:27:12.90:108,0,13	0/1:32,1:23:81.54:82,0,184	0/1:16,0:12:17.88:18,0,54	0/1:18,0:12:40.40:51,0,40
chr10	93401211	.	AC	A	792.76	PASS	AB=0.917;AC=20;AF=0.370;AN=54;BaseQRankSum=10.526;DP=1307;FS=154.720;HRun=2;HaplotypeScore=253.2642;InbreedingCoeff=-0.4175;MQ=29.50;MQ0=214;MQRankSum=-8.531;QD=0.98;ReadPosRankSum=-2.647;VQSLOD=0.1199;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,2:36:40.40:0,40,836	1/1:12,0:7:4.45:12,4,0	./.	0/0:78,0:4:11.67:0,12,106	0/0:20,2:13:26.92:0,27,392	0/0:38,2:26:34.15:0,34,493	0/1:102,7:83:5.84:6,0,1296	0/1:55,8:21:77.46:77,0,371	0/1:31,2:20:40.83:41,0,224	0/1:40,3:26:69.09:69,0,484	0/0:13,0:9:21.05:0,21,293	0/1:39,6:27:53.63:54,0,116	0/1:36,3:31:21.95:22,0,401	0/1:40,5:26:65.32:65,0,201	0/1:33,4:22:43.53:44,0,146	0/1:26,6:17:50.21:50,0,273	0/1:40,7:29:99:193,0,107	0/1:34,5:27:99:152,0,406	0/1:37,1:15:5.02:5,0,330	0/0:24,0:16:23.31:0,23,319	0/0:155,17:122:92.48:0,92,1589	0/1:32,2:22:4.90:5,0,91	0/0:21,2:20:6.93:0,7,116	0/1:54,7:42:49.17:49,0,137	0/1:41,2:29:24.28:24,0,26	0/1:42,3:28:1.53:2,0,473	0/1:19,0:15:15.49:15,0,330	0/1:11,2:13:60.73:61,0,161
chr10	93401238	.	AC	A	1632.05	PASS	AB=0.873;AC=20;AF=0.385;AN=52;BaseQRankSum=8.441;DP=1153;FS=205.356;HRun=2;HaplotypeScore=219.0167;InbreedingCoeff=-0.6238;MQ=28.43;MQ0=202;MQRankSum=-9.009;QD=1.70;ReadPosRankSum=-2.099;VQSLOD=-0.4472;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,7:35:5.03:0,5,771	0/0:12,1:8:7.64:0,8,74	./.	./.	0/0:18,0:13:21.03:0,21,248	0/1:26,5:20:64.50:64,0,252	0/1:68,14:63:99:116,0,724	0/1:63,3:23:7.18:7,0,334	0/1:32,6:21:69.55:70,0,181	0/1:35,10:23:99:135,0,302	0/0:10,1:10:11.99:0,12,122	0/1:36,10:29:40.57:141,0,41	0/1:36,8:32:99:244,0,260	0/1:30,10:22:15.64:36,0,16	0/1:27,5:18:29.32:29,0,106	0/1:18,4:13:66.19:66,0,160	0/1:26,15:23:45.63:241,0,46	0/1:36,4:24:99:228,0,207	0/1:41,2:18:63.01:63,0,208	0/0:28,5:28:18:0,18,207	0/1:135,36:122:29.87:30,0,1034	0/1:39,1:26:39.06:47,0,39	0/0:21,4:21:1.13:0,1,38	0/1:49,11:40:6.14:181,0,6	0/1:44,5:30:13:13,0,23	0/1:33,4:20:37.66:38,0,316	0/1:16,1:14:5.11:5,0,259	0/1:11,1:10:22.97:23,0,151
chr10	93401246	.	CA	C	303.52	PASS	AB=0.944;AC=13;AF=0.232;AN=56;BaseQRankSum=9.965;DP=1140;FS=126.916;HRun=1;HaplotypeScore=202.2220;InbreedingCoeff=-0.1564;MQ=29.50;MQ0=177;MQRankSum=-8.244;QD=0.60;ReadPosRankSum=-1.335;VQSLOD=-0.6652;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,2:43:66.90:0,67,1036	0/0:14,0:8:13.46:0,13,121	0/0:17,0:3:9.03:0,9,116	0/0:18,0:2:6.02:0,6,76	0/0:23,0:19:18.03:0,18,210	0/1:33,1:24:19.34:19,0,240	0/1:68,8:56:67.59:68,0,687	0/0:63,1:23:43:0,43,523	0/0:40,1:27:9.50:0,9,402	0/1:43,6:29:87.26:87,0,380	0/0:13,0:11:12.03:0,12,135	0/0:41,3:27:17.69:0,18,245	0/1:37,2:31:7.03:7,0,440	0/0:32,2:18:10.28:0,10,137	0/1:30,2:16:0.89:1,0,129	0/1:25,0:16:5.28:5,0,276	0/1:34,4:21:63.70:64,0,145	0/1:39,2:25:99:105,0,397	0/0:35,0:15:6.19:0,6,375	0/0:29,1:27:14.31:0,14,176	0/0:158,8:116:99:0,108,1487	0/1:43,2:30:7.95:8,0,71	1/1:24,0:20:2.87:15,3,0	0/1:58,3:42:56.77:57,0,157	0/1:39,2:24:8.13:8,0,29	0/0:40,3:25:44.36:0,44,489	0/0:16,1:15:6.06:0,6,258	0/0:14,0:12:21.47:0,21,247
chr10	93401247	.	AC	A	114.77	PASS	AB=0.992;AC=11;AF=0.196;AN=56;BaseQRankSum=9.488;DP=1123;FS=101.711;HRun=1;HaplotypeScore=198.6344;InbreedingCoeff=-0.1355;MQ=29.76;MQ0=171;MQRankSum=-8.124;QD=0.26;ReadPosRankSum=-0.695;VQSLOD=-0.4758;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:42:64.97:0,65,1044	0/0:14,0:8:14.79:0,15,145	0/0:16,0:3:9.03:0,9,116	0/0:18,0:2:6.02:0,6,76	0/0:23,0:20:18.04:0,18,210	0/1:34,0:24:35.65:36,0,238	0/1:76,0:56:38.73:39,0,691	0/0:61,1:22:32.56:0,33,542	0/0:41,0:27:1.30:0,1,411	0/1:48,0:29:30.41:30,0,394	0/0:13,0:11:12.01:0,12,121	0/0:43,0:26:24.74:0,25,266	0/1:40,0:31:38.81:39,0,442	0/0:33,1:18:14.02:0,14,158	0/0:29,2:16:6.41:0,6,141	0/0:25,0:16:8.91:0,9,304	0/1:39,0:22:39.47:39,0,206	0/1:39,1:25:23.85:24,0,433	0/1:32,1:15:0.56:1,0,362	0/0:30,0:27:15.02:0,15,188	0/0:158,0:109:99:0,124,1508	0/1:44,1:29:18.40:18,0,69	1/1:23,0:20:1.86:7,2,0	0/1:60,0:40:17.45:17,0,177	0/0:40,0:23:10.23:0,10,65	0/0:43,1:26:41.59:0,42,525	0/0:17,0:15:20.44:0,20,275	0/0:14,0:12:8.30:0,8,250
chr10	93401249	.	AC	A	302.96	PASS	AB=0.990;AC=14;AF=0.250;AN=56;BaseQRankSum=10.594;DP=1115;FS=111.558;HRun=1;HaplotypeScore=195.1573;InbreedingCoeff=-0.2121;MQ=29.87;MQ0=165;MQRankSum=-9.061;QD=0.55;ReadPosRankSum=-0.365;VQSLOD=-0.2656;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:44:62.54:0,63,1076	0/0:14,0:8:2.76:0,3,106	0/0:16,0:3:9.03:0,9,116	0/0:19,0:3:6.02:0,6,76	0/0:25,0:20:18.05:0,18,223	0/1:33,0:23:35.09:35,0,236	0/1:72,0:55:24.52:25,0,670	0/0:60,0:22:23.44:0,23,504	0/1:39,1:26:32.66:33,0,367	0/1:50,0:29:34.19:34,0,433	0/0:12,0:10:9.02:0,9,97	0/1:43,0:26:25.06:25,0,181	0/1:40,1:32:99:102,0,436	0/0:34,0:18:13.55:0,14,146	0/1:32,0:16:0.09:0,0,141	0/0:24,0:17:5.05:0,5,336	0/1:39,0:23:57.50:57,0,210	0/1:39,0:25:25.95:26,0,414	0/1:25,2:12:23.21:23,0,301	0/0:28,0:26:15.51:0,16,197	0/0:154,1:106:99:0,112,1463	0/1:45,0:30:43.20:44,0,43	1/1:22,0:19:4.96:26,5,0	0/1:58,0:41:21.79:22,0,216	0/0:40,0:22:9.68:0,10,65	0/0:45,0:28:31.99:0,32,574	0/0:17,0:15:20.55:0,21,273	0/0:13,1:12:7.56:0,8,290
chr10	93401251	.	A	AC	653.64	PASS	AB=0.989;AC=21;AF=0.375;AN=56;BaseQRankSum=11.082;DP=1104;FS=146.167;HRun=1;HaplotypeScore=197.1981;InbreedingCoeff=-0.4383;MQ=30.54;MQ0=151;MQRankSum=-9.741;QD=0.87;ReadPosRankSum=-2.614;VQSLOD=-0.7637;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:48:49.89:0,50,884	0/1:14,0:8:41.77:42,0,66	0/0:17,0:4:12.04:0,12,152	0/0:18,0:4:12.01:0,12,135	0/0:27,0:22:18.50:0,19,187	0/1:32,0:23:60.24:60,0,213	0/1:70,0:53:17.24:17,0,560	0/1:56,0:21:21.37:21,0,395	0/1:39,0:26:72.09:72,0,274	0/1:50,0:29:6.15:6,0,405	0/1:16,0:14:6.93:7,0,37	0/1:41,0:26:57.62:58,0,91	0/1:41,0:33:95.79:96,0,328	0/1:34,0:18:32.02:32,0,85	0/1:30,0:16:21.54:22,0,113	0/0:25,0:18:2.98:0,3,324	0/1:37,2:24:77.42:77,0,168	0/1:37,1:24:99:111,0,256	0/1:24,0:12:7.94:8,0,178	0/0:27,0:25:10.59:0,11,120	0/0:151,0:105:92:0,92,1015	0/1:44,1:30:20.94:89,0,21	1/1:23,0:19:6.22:47,6,0	0/1:57,1:40:20.79:21,0,178	0/1:37,0:20:0.98:1,0,32	0/1:44,0:27:16.57:17,0,515	0/0:17,0:15:12:0,12,174	0/1:15,0:13:5.88:6,0,246
chr10	93401414	.	A	AGTGT	2599.26	PASS	AB=0.795;AC=38;AF=0.731;AN=52;BaseQRankSum=0.306;DP=632;FS=0.000;HRun=0;HaplotypeScore=126.1856;InbreedingCoeff=-0.2014;MQ=67.13;MQ0=9;MQRankSum=1.253;QD=4.77;ReadPosRankSum=-1.555;VQSLOD=2.1196;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,6:30:17.40:252,17,0	1/1:4,3:7:6.02:141,6,0	./.	./.	0/1:17,3:24:10.72:93,0,11	1/1:17,0:17:2.57:35,3,0	1/1:29,0:27:11.50:156,12,0	1/1:31,0:31:3.48:42,3,0	0/1:5,0:12:15.97:16,0,20	0/1:16,3:23:26.13:185,0,26	0/1:11,0:10:15.93:16,0,84	1/1:16,0:16:18.03:303,18,0	1/1:13,0:12:3.90:53,4,0	1/1:12,1:14:3.01:71,3,0	0/1:7,7:15:31.66:268,0,32	0/1:12,0:20:19.43:19,0,102	0/1:17,7:28:34.62:182,0,35	0/1:18,0:30:99:111,0,249	1/1:14,0:22:11.47:88,11,0	0/1:11,0:13:21.73:22,0,79	0/1:39,0:48:30.94:31,0,124	1/1:15,4:20:3.01:71,3,0	0/1:17,0:17:0:0,0,0	1/1:17,2:23:9.03:177,9,0	1/1:17,1:22:6.02:122,6,0	0/1:23,2:30:7.23:174,0,7	1/1:12,0:22:22.43:118,22,0	0/0:8,0:13:14.98:0,15,131
chr10	93402341	.	CTG	C	4769.08	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=10.161;DP=753;FS=10.396;HRun=0;HaplotypeScore=201.8492;InbreedingCoeff=0.9744;MQ=76.48;MQ0=1;MQRankSum=-3.627;QD=7.73;ReadPosRankSum=2.600;VQSLOD=3.7417;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:37:63.79:244,64,0	1/1:17,1:18:30.46:134,30,0	0/0:29,0:28:60.99:0,61,849	0/0:24,0:24:36.32:0,36,796	1/1:31,0:31:65.29:253,65,0	0/0:31,0:30:78.19:0,78,862	0/0:28,0:27:63.13:0,63,730	1/1:34,0:34:40.05:291,40,0	1/1:23,2:25:46.83:221,47,0	1/1:40,0:40:91.29:372,91,0	1/1:23,0:23:29.70:171,30,0	1/1:26,1:27:44.32:185,44,0	1/1:31,0:31:58.83:206,59,0	1/1:30,0:30:38.36:280,38,0	1/1:23,1:24:49.46:202,49,0	1/1:30,1:30:58.91:230,59,0	0/0:24,0:24:72.22:0,72,1173	1/1:21,0:21:10.90:80,11,0	1/1:27,0:27:44.48:214,44,0	1/1:25,0:25:51.76:186,52,0	1/1:19,1:19:12.70:136,13,0	1/1:21,1:22:43.04:197,43,0	1/1:27,0:27:50.25:268,50,0	1/1:29,0:28:41.39:190,41,0	1/1:20,1:21:33.34:163,33,0	1/1:32,1:32:70.04:272,70,0	1/1:33,0:33:60.14:208,60,0	1/1:5,1:6:10.37:65,10,0
chr10	93402348	.	TG	T	20018.91	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=5.589;DP=756;FS=10.094;HRun=1;HaplotypeScore=129.3086;InbreedingCoeff=0.9925;MQ=75.67;MQ0=3;MQRankSum=-5.729;QD=32.55;ReadPosRankSum=1.902;VQSLOD=3.4205;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,37:38:87.24:1157,87,0	1/1:1,16:17:35.95:473,36,0	0/0:30,0:29:75.55:0,76,865	0/0:24,0:24:36.93:0,37,687	1/1:0,33:33:90.05:1144,90,0	0/0:32,0:31:77.37:0,77,544	0/0:30,0:29:62.55:0,63,497	1/1:14,22:35:89.69:1125,90,0	1/1:2,25:27:65.88:832,66,0	1/1:0,41:41:99:1489,117,0	1/1:4,18:22:63.99:824,64,0	1/1:1,28:29:63.04:822,63,0	1/1:0,31:31:78.26:1067,78,0	1/1:7,21:28:79.27:1038,79,0	1/1:1,25:26:66.05:872,66,0	1/1:1,32:32:72.07:967,72,0	0/0:25,0:25:75.13:0,75,985	1/1:1,17:18:36.51:558,37,0	1/1:1,23:22:62.91:679,63,0	1/1:0,24:24:66.14:867,66,0	1/1:9,9:17:38.70:471,39,0	1/1:1,22:23:56.92:701,57,0	1/1:5,23:28:78.03:1045,78,0	1/1:1,25:25:66.03:934,66,0	1/1:2,19:21:42.85:547,43,0	1/1:1,32:32:96.23:1233,96,0	1/1:0,32:32:75.25:1036,75,0	1/1:1,5:6:11.87:139,12,0
chr10	93402979	.	TACACACAC	T	3752.09	PASS	AB=0.885;AC=26;AF=0.542;AN=48;BaseQRankSum=0.820;DP=556;FS=2.161;HRun=0;HaplotypeScore=162.5982;InbreedingCoeff=0.6928;MQ=52.48;MQ0=20;MQRankSum=-6.929;QD=14.38;ReadPosRankSum=-0.470;VQSLOD=2.9683;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:41:36.03:0,36,985	0/0:7,0:11:15.05:0,15,554	./.	./.	1/1:11,7:19:4.23:78,4,0	1/1:7,8:15:11.84:299,12,0	1/1:18,11:31:11.43:249,11,0	./.	1/1:6,3:12:9:176,9,0	1/1:15,9:25:32.06:628,32,0	1/1:9,5:14:3.01:75,3,0	0/0:11,0:17:21.02:0,21,390	0/0:9,0:14:24.04:0,24,431	0/0:11,0:23:24.07:0,24,475	0/0:12,0:21:27.08:0,27,887	1/1:8,15:25:18.06:431,18,0	0/1:19,0:18:39.79:99,0,40	0/1:14,2:20:20.76:246,0,21	1/1:11,2:14:11.34:260,11,0	1/1:8,2:12:8.90:197,9,0	./.	0/0:15,0:19:14.31:0,14,294	0/0:8,0:12:2.27:0,2,287	0/0:19,0:27:44.67:0,45,745	0/0:11,0:16:15.05:0,15,323	1/1:9,8:17:18.06:416,18,0	1/1:14,8:24:16.17:426,16,0	1/1:3,7:10:9.01:172,9,0
chr10	93403024	.	ACGAG	A	177.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.458;DP=634;FS=5.276;HRun=0;HaplotypeScore=161.3825;InbreedingCoeff=0.9246;MQ=55.90;MQ0=13;MQRankSum=-5.142;QD=17.72;ReadPosRankSum=1.868;VQSLOD=2.7731;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:62.60:0,63,1565	0/0:9,0:9:21.07:0,21,442	0/0:23,0:15:36.01:0,36,967	0/0:23,0:16:48.04:0,48,1051	0/0:16,0:16:23.84:0,24,456	0/0:25,0:24:50.91:0,51,958	0/0:35,0:33:60.01:0,60,1120	0/0:24,0:23:63.69:0,64,1560	0/0:14,0:14:26.27:0,26,522	0/0:34,0:31:71.60:0,72,1433	0/0:12,0:12:18.03:0,18,369	0/0:26,0:25:67.60:0,68,1396	0/0:19,0:19:56.06:0,56,972	0/0:23,0:23:49.68:0,50,864	0/0:14,0:14:26.79:0,27,524	0/0:26,0:26:39.34:0,39,716	1/1:4,6:10:18.05:268,18,0	0/0:27,0:27:48.74:0,49,1168	0/0:21,0:20:40.19:0,40,1130	0/0:12,0:12:17.40:0,17,378	0/0:39,0:37:59.87:0,60,1324	0/0:29,0:28:71.73:0,72,1629	0/0:14,0:14:28.17:0,28,705	0/0:34,0:34:84.26:0,84,1632	0/0:23,0:21:54.18:0,54,1141	0/0:22,0:21:10.92:0,11,978	0/0:26,0:25:23.81:0,24,815	0/0:14,0:14:21.05:0,21,392
chr10	93403081	.	G	GTATA	1395.92	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.245;DP=703;FS=6.066;HRun=0;HaplotypeScore=119.5012;InbreedingCoeff=0.9969;MQ=85.30;MQ0=0;MQRankSum=-2.253;QD=60.69;ReadPosRankSum=0.918;VQSLOD=5.1185;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,166,3079	0/0:9,0:9:24.08:0,24,448	0/0:26,0:26:69.22:0,69,1211	0/0:37,0:37:94.96:0,95,1628	0/0:17,0:17:51.17:0,51,945	0/0:25,0:25:75.24:0,75,1369	0/0:33,0:33:90.31:0,90,1678	0/0:32,0:32:93.32:0,93,1712	0/0:24,0:24:72.25:0,72,1317	0/0:22,0:22:66.23:0,66,1232	0/0:17,0:17:42.14:0,42,778	0/0:24,0:24:69.24:0,69,1281	0/0:18,0:18:48.16:0,48,896	0/0:24,0:24:72.23:0,72,1305	0/0:19,0:19:57.20:0,57,1064	0/0:20,0:20:57.18:0,57,1026	1/1:4,19:23:57.20:1491,57,0	0/0:31,0:31:93.32:0,93,1724	0/0:23,0:23:59.66:0,60,1009	0/0:20,0:20:57.20:0,57,1063	0/0:43,0:43:99:0,111,1985	0/0:24,0:24:69.24:0,69,1288	0/0:17,0:17:45.15:0,45,839	0/0:35,0:35:99:0,105,1945	0/0:25,0:25:72.25:0,72,1344	0/0:20,0:20:53.54:0,54,1006	0/0:24,0:24:63.22:0,63,1176	0/0:11,0:11:27.09:0,27,504
chr10	93403162	.	GT	G	945.92	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.524;DP=657;FS=0.000;HRun=3;HaplotypeScore=70.7627;InbreedingCoeff=0.9974;MQ=87.60;MQ0=0;MQRankSum=-1.073;QD=33.78;ReadPosRankSum=3.156;VQSLOD=4.1354;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,172,2388	0/0:12,0:12:36.12:0,36,517	0/0:28,0:28:78.22:0,78,1070	0/0:29,0:29:87.29:0,87,1220	0/0:18,0:18:51.17:0,51,734	0/0:22,0:22:63.20:0,63,888	0/0:33,0:33:96.30:0,96,1346	0/0:27,0:27:75.24:0,75,1049	0/0:13,0:13:39.13:0,39,555	0/0:14,0:14:39.12:0,39,547	0/0:19,0:19:54.14:0,54,754	0/0:28,0:28:81.27:0,81,1167	0/0:13,0:13:39.13:0,39,560	0/0:31,0:31:84.28:0,84,1208	0/0:18,0:18:51.16:0,51,719	0/0:26,0:26:75.24:0,75,1064	1/1:0,28:28:84.26:1041,84,0	0/0:22,0:22:63.21:0,63,902	0/0:23,0:23:66.22:0,66,947	0/0:14,0:14:39.13:0,39,562	0/0:48,0:48:99:0,141,2030	0/0:18,0:18:48.14:0,48,656	0/0:13,0:13:36.11:0,36,498	0/0:32,0:32:96.27:0,96,1342	0/0:18,0:18:48.16:0,48,690	0/0:28,0:28:81.26:0,81,1141	0/0:14,0:14:42.06:0,42,559	0/0:8,0:8:24.08:0,24,346
chr10	93403685	.	A	AC	2256.60	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.693;DP=611;FS=8.954;HRun=2;HaplotypeScore=63.2283;InbreedingCoeff=0.9911;MQ=80.57;MQ0=0;MQRankSum=-1.895;QD=36.99;ReadPosRankSum=-0.160;VQSLOD=3.6833;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,1702	0/0:10,0:10:30.04:0,30,353	0/0:20,0:20:37.44:0,37,494	0/0:16,0:16:42:0,42,490	0/0:16,0:16:42.11:0,42,504	1/1:0,26:26:78.26:1108,78,0	1/1:1,34:35:90.30:1270,90,0	0/0:17,0:17:45.14:0,45,558	0/0:25,0:25:72.19:0,72,876	0/0:21,0:21:63.18:0,63,761	0/0:12,0:12:36.10:0,36,433	0/0:35,0:35:99:0,105,1301	0/0:15,0:15:42.06:0,42,492	0/0:11,0:11:33.09:0,33,397	0/0:30,0:29:81.23:0,81,979	0/0:14,0:14:39.11:0,39,470	0/0:31,0:31:93.28:0,93,1140	0/0:23,0:23:69.17:0,69,837	0/0:22,0:22:57.17:0,57,694	0/0:15,0:15:42.12:0,42,508	0/0:40,0:40:99:0,117,1450	0/0:12,0:12:36.10:0,36,432	0/0:6,0:6:15.01:0,15,159	0/0:35,0:35:99:0,102,1253	0/0:15,0:15:42.12:0,42,508	0/0:18,0:18:51.11:0,51,614	0/0:19,0:19:57.15:0,57,677	0/0:23,0:23:63.20:0,63,779
chr10	93403840	.	ATGG	A	4099.79	PASS	AB=0.896;AC=28;AF=0.500;AN=56;BaseQRankSum=3.071;DP=591;FS=3.685;HRun=0;HaplotypeScore=126.1847;InbreedingCoeff=0.4651;MQ=50.76;MQ0=30;MQRankSum=-1.072;QD=9.88;ReadPosRankSum=0.473;VQSLOD=2.9408;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:50,0:47:26.99:27,0,326	0/0:9,0:8:6.48:0,6,61	0/0:22,0:8:2.97:0,3,20	0/0:19,0:13:5.04:0,5,60	1/1:6,15:20:21.06:303,21,0	1/1:9,14:22:12.04:174,12,0	0/1:10,20:29:14.51:395,0,15	0/1:30,0:21:80.76:137,0,81	1/1:10,4:13:17.71:202,18,0	1/1:12,19:31:12.40:494,12,0	1/1:10,3:12:5.71:65,6,0	0/0:17,0:17:30.03:0,30,497	0/0:9,0:9:17.87:0,18,209	0/0:9,0:9:12.02:0,12,208	0/1:25,0:25:99:153,0,123	1/1:8,5:13:9.94:280,10,0	1/1:13,5:18:30.49:492,30,0	0/1:9,2:11:27.40:84,0,27	1/1:15,15:27:42.83:332,43,0	1/1:16,3:16:14.97:155,15,0	1/1:41,6:33:23.71:251,24,0	0/0:13,0:10:6.02:0,6,123	0/0:14,0:14:23.96:0,24,288	0/0:41,0:41:63.83:0,64,1196	0/0:12,0:10:27.02:0,27,470	0/1:25,2:24:33.38:267,0,33	1/1:8,5:12:23.99:288,24,0	0/0:11,0:9:23.98:0,24,234
chr10	93403882	.	A	ATGG	2360.65	PASS	AB=0.901;AC=29;AF=0.518;AN=56;BaseQRankSum=3.545;DP=552;FS=0.000;HRun=0;HaplotypeScore=149.0314;InbreedingCoeff=0.5062;MQ=40.31;MQ0=54;MQRankSum=-6.234;QD=6.45;ReadPosRankSum=-4.340;VQSLOD=1.5392;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:29:25.58:47,0,26	1/1:9,0:8:5.96:46,6,0	0/0:15,0:2:5.92:0,6,40	0/0:20,0:6:8.07:0,8,131	0/1:16,4:20:0:0,0,0	1/1:19,0:18:3.35:16,3,0	0/0:28,0:27:2.82:0,3,18	1/1:18,0:10:14.80:97,15,0	1/1:10,4:13:13.64:114,14,0	1/1:27,8:31:29.78:462,30,0	1/1:8,5:12:5.72:64,6,0	0/0:16,0:16:11.84:0,12,92	0/0:11,0:11:10.65:0,11,90	0/0:8,0:8:5.99:0,6,49	0/1:23,0:22:47.68:48,0,82	1/1:9,10:19:26.90:356,27,0	0/0:18,0:16:20.90:0,21,158	1/1:8,4:11:15.01:237,15,0	1/1:18,1:14:8.95:92,9,0	1/1:12,7:14:0.47:1,0,0	0/1:49,6:37:0.38:1,0,0	0/0:16,0:9:3:0,3,26	0/0:13,0:11:5.99:0,6,51	0/0:26,0:24:23.79:0,24,194	0/0:15,0:13:20.83:0,21,250	1/1:19,9:21:0.92:491,1,0	1/1:7,11:16:26.94:383,27,0	0/1:7,3:7:10.06:83,0,10
chr10	93403900	.	GTGA	G	948.15	PASS	AB=0.940;AC=21;AF=0.404;AN=52;BaseQRankSum=-4.719;DP=485;FS=2.844;HRun=0;HaplotypeScore=134.8031;InbreedingCoeff=0.3128;MQ=37.31;MQ0=39;MQRankSum=-0.110;QD=3.85;ReadPosRankSum=0.669;VQSLOD=2.6279;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:22:20.52:0,21,260	0/0:6,0:6:5.94:0,6,42	0/1:32,0:5:1.28:1,0,26	0/0:38,0:9:16.86:0,17,208	./.	0/1:10,0:10:6.90:7,0,29	1/1:16,0:16:2.93:18,3,0	0/1:20,0:12:44.39:44,0,71	0/0:12,0:11:0.21:0,0,43	0/0:18,0:17:21.32:0,21,141	0/0:15,0:15:6.16:0,6,43	1/1:5,9:14:6.91:82,7,0	1/1:3,7:10:6.73:154,7,0	0/1:2,5:7:6.81:37,0,7	0/0:27,0:24:16.46:0,16,176	0/0:18,0:18:16.88:0,17,121	0/0:16,0:14:11.15:0,11,106	0/1:10,0:9:5.50:6,0,45	0/1:15,0:12:36.26:56,0,36	0/0:14,0:13:3.92:0,4,29	1/1:45,0:33:2.05:7,2,0	./.	1/1:0,8:8:8.94:102,9,0	1/1:6,11:16:12.04:170,12,0	1/1:11,4:13:35.49:424,35,0	0/1:27,0:23:2.27:2,0,151	0/0:17,0:15:21.08:0,21,112	0/0:6,0:4:2.98:0,3,21
chr10	93403913	.	CGAT	C	740.09	PASS	AB=0.965;AC=21;AF=0.420;AN=50;BaseQRankSum=-5.602;DP=479;FS=11.058;HRun=0;HaplotypeScore=134.8665;InbreedingCoeff=-0.0159;MQ=36.07;MQ0=36;MQRankSum=2.691;QD=3.16;ReadPosRankSum=-4.398;VQSLOD=0.2569;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:23.78:0,24,175	./.	0/0:41,0:6:11.77:0,12,75	0/0:50,0:12:11.53:0,12,74	./.	0/1:12,0:12:3.62:4,0,50	1/1:8,0:8:2.93:18,3,0	0/1:27,0:20:25.74:88,0,26	0/0:10,0:10:10.98:0,11,47	0/1:17,0:17:66.09:66,0,80	0/1:12,0:12:3.63:15,0,4	0/1:9,0:9:13.95:17,0,14	0/1:9,0:9:36.65:37,0,44	0/0:6,0:6:2.89:0,3,19	0/0:25,0:22:12.54:0,13,145	0/1:16,0:16:19.40:19,0,25	0/0:12,0:10:8.15:0,8,84	0/1:7,5:11:25.95:100,0,26	1/1:20,0:17:3.24:56,3,0	1/1:13,1:14:7.78:39,8,0	0/0:41,0:31:2.53:0,3,10	./.	1/1:7,0:7:5.95:41,6,0	1/1:11,0:11:5.94:43,6,0	0/1:14,0:13:6.24:50,0,6	0/1:28,1:26:32.13:218,0,32	0/1:16,1:16:38.20:84,0,38	0/0:9,0:9:16.46:0,16,113
chr10	93403935	.	G	GATAATAATA	1498.51	PASS	AB=1.000;AC=20;AF=0.370;AN=54;BaseQRankSum=-0.688;DP=403;FS=5.904;HRun=0;HaplotypeScore=151.0706;InbreedingCoeff=0.6680;MQ=37.29;MQ0=20;MQRankSum=-0.560;QD=15.77;ReadPosRankSum=-2.097;VQSLOD=1.9087;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:2.57:0,3,346	./.	0/0:26,0:5:12.04:0,12,236	0/0:32,0:8:15:0,15,250	0/0:13,0:13:12.04:0,12,279	1/1:11,0:11:21.10:359,21,0	1/1:5,0:5:1.02:3,1,0	0/0:32,0:27:61.29:0,61,939	0/0:6,0:6:14.43:0,14,110	0/0:18,0:18:45.83:0,46,647	0/0:11,0:11:14.48:0,14,162	1/1:5,1:6:9.03:191,9,0	1/1:6,0:6:18.03:332,18,0	1/1:4,0:4:11.94:196,12,0	0/1:23,0:20:13.76:14,0,441	0/0:13,0:13:26.66:0,27,245	0/1:14,0:12:99:121,0,113	0/0:16,0:16:29.91:0,30,491	0/0:21,0:18:32.97:0,33,442	0/0:16,0:16:15.04:0,15,273	0/0:27,0:20:3.74:0,4,12	1/1:4,0:4:6.02:107,6,0	1/1:5,0:5:12.02:145,12,0	1/1:6,0:6:8.86:106,9,0	1/1:5,6:10:2.69:109,3,0	0/0:25,0:25:67.87:0,68,976	0/0:17,0:16:38.15:0,38,500	0/0:14,0:14:35.54:0,36,628
chr10	93404301	.	C	CTGCCGTAGAG	891.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.770;DP=471;FS=1.304;HRun=0;HaplotypeScore=172.2386;InbreedingCoeff=0.8508;MQ=95.27;MQ0=0;MQRankSum=-3.668;QD=63.71;ReadPosRankSum=-1.915;VQSLOD=2.9293;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:48.16:0,48,1502	0/0:5,0:5:12.02:0,12,318	0/0:21,0:21:50.14:0,50,1364	0/0:26,0:26:60.65:0,61,1626	0/0:20,0:20:57.17:0,57,1590	0/0:4,0:4:6.02:0,6,198	0/0:18,0:17:37.32:0,37,1379	0/0:27,0:27:81.26:0,81,2280	0/0:11,0:11:24.08:0,24,741	0/0:18,0:18:51.17:0,51,1503	0/0:12,0:12:27.09:0,27,828	0/0:13,0:13:39.12:0,39,1211	0/0:8,0:8:18.06:0,18,540	0/0:23,0:23:60.21:0,60,1842	0/0:15,0:15:36.11:0,36,1008	0/0:12,0:12:33.10:0,33,930	1/1:2,10:14:21.07:984,21,0	0/0:29,0:29:69.24:0,69,2083	0/0:18,0:18:51.17:0,51,1498	0/0:11,0:11:21.07:0,21,692	0/0:26,0:26:66.23:0,66,1805	0/0:18,0:18:48.16:0,48,1287	0/0:9,0:9:24.08:0,24,705	0/0:22,0:21:63.22:0,63,1883	0/0:10,0:10:15.05:0,15,494	0/0:17,0:17:45.13:0,45,1337	0/0:16,0:16:39.13:0,39,1191	0/0:24,0:24:69.24:0,69,2183
chr10	93404338	.	CT	C	1969.67	PASS	AB=0.837;AC=25;AF=0.463;AN=54;BaseQRankSum=-6.596;DP=442;FS=1.017;HRun=13;HaplotypeScore=83.4100;InbreedingCoeff=0.4038;MQ=73.45;MQ0=5;MQRankSum=2.113;QD=6.94;ReadPosRankSum=3.027;VQSLOD=2.8134;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:10:10,0,49	0/0:8,0:7:1.10:0,1,8	0/1:17,0:11:0.53:1,0,81	0/1:16,0:14:11.13:11,0,81	0/1:10,10:20:32.09:109,0,32	./.	0/0:8,0:7:0:0,0,0	1/1:11,15:27:42.91:283,43,0	1/1:3,8:12:13.94:93,14,0	0/1:7,11:18:5.82:199,0,6	1/1:4,7:11:20.82:151,21,0	0/0:11,0:15:28.55:0,29,154	0/0:9,0:10:3.21:0,3,75	0/0:9,0:18:20.17:0,20,111	0/1:10,0:10:3.47:3,0,13	1/1:5,9:14:20.83:153,21,0	0/0:16,0:15:9.89:0,10,128	0/1:7,20:29:27.76:282,0,28	1/1:5,9:14:25.85:188,26,0	1/1:4,11:12:1.83:140,2,0	1/1:6,9:15:17.88:131,18,0	0/0:3,0:12:28.98:0,29,170	0/0:9,0:12:15.96:0,16,104	0/0:17,0:23:57.52:0,58,312	0/0:5,0:14:10.60:0,11,56	1/1:12,11:22:34.38:234,34,0	1/1:4,11:17:1.60:157,2,0	0/0:18,0:17:12.42:0,12,256
chr10	93404350	.	T	TCC	306.16	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=1.611;DP=419;FS=2.925;HRun=0;HaplotypeScore=106.2574;InbreedingCoeff=0.8347;MQ=62.84;MQ0=14;MQRankSum=-0.990;QD=6.80;ReadPosRankSum=0.554;VQSLOD=3.4717;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,2:29:6.78:230,7,0	1/1:2,1:6:10.85:113,11,0	0/0:12,0:6:17.87:0,18,191	0/0:11,0:9:14.16:0,14,158	0/0:16,0:16:28.25:0,28,296	./.	./.	0/0:23,0:20:33.78:0,34,395	0/0:13,0:13:23.99:0,24,245	0/0:19,0:19:10.12:0,10,352	0/0:11,0:11:26.98:0,27,253	0/0:13,0:13:32.95:0,33,304	0/0:12,0:12:27.16:0,27,283	0/0:16,0:14:26.98:0,27,263	1/1:7,1:8:4.38:82,4,0	0/0:11,0:11:29.64:0,30,247	0/0:14,0:13:25.29:0,25,219	0/0:31,0:31:74.90:0,75,711	0/0:13,0:13:17.17:0,17,284	0/0:20,0:17:41.13:0,41,401	0/0:17,0:17:32.99:0,33,332	0/0:15,0:15:39.34:0,39,376	0/0:14,0:14:29.86:0,30,282	0/0:27,0:25:63.62:0,64,550	0/0:12,0:13:7.25:0,7,127	0/0:17,0:15:42.01:0,42,359	0/0:17,0:17:38.95:0,39,375	0/0:16,0:12:31.92:0,32,470
chr10	93404351	.	T	TCC	622.99	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=-1.015;DP=420;FS=0.852;HRun=5;HaplotypeScore=96.5301;InbreedingCoeff=0.9062;MQ=63.00;MQ0=16;MQRankSum=-1.851;QD=10.93;ReadPosRankSum=-0.185;VQSLOD=-0.4190;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,19:31:33.08:439,33,0	1/1:9,0:9:15.09:149,15,0	0/0:10,0:5:8.60:0,9,74	0/0:10,0:9:11.69:0,12,77	0/0:14,0:15:26.73:0,27,240	./.	1/1:8,0:6:6.01:69,6,0	0/0:24,0:21:38.90:0,39,352	0/0:14,0:14:24:0,24,233	0/0:19,0:19:38.95:0,39,351	0/0:9,0:9:26.99:0,27,243	0/0:14,0:13:19.33:0,19,174	0/0:10,0:11:26.65:0,27,228	0/0:15,0:13:23.31:0,23,158	1/1:2,0:8:9.91:112,10,0	0/0:12,0:11:26.97:0,27,232	0/0:5,0:9:17.35:0,17,134	0/0:31,0:31:72:0,72,680	0/0:14,0:14:27:0,27,258	0/0:18,0:17:36.03:0,36,363	0/0:17,0:17:39.01:0,39,378	0/0:15,0:15:29.13:0,29,248	0/0:13,0:14:20.52:0,21,166	0/0:25,0:25:41.38:0,41,344	0/0:11,0:11:11.71:0,12,101	0/0:18,0:17:35.87:0,36,326	0/0:17,0:17:38.99:0,39,360	0/0:16,0:12:20.95:0,21,229
chr10	93404475	.	CTG	C	1312.58	PASS	AB=0.893;AC=26;AF=0.481;AN=54;BaseQRankSum=-0.462;DP=643;FS=27.557;HRun=0;HaplotypeScore=104.8141;InbreedingCoeff=0.0788;MQ=65.42;MQ0=19;MQRankSum=1.923;QD=3.16;ReadPosRankSum=-1.046;VQSLOD=0.7509;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:36:5.83:6,0,63	0/0:8,0:8:3:0,3,25	./.	0/0:53,0:29:0:0,0,0	0/1:15,0:11:6:6,0,18	0/1:13,0:13:0:0,0,0	0/0:23,0:20:8.71:0,9,61	1/1:21,0:18:2.87:15,3,0	1/1:9,8:17:5.60:43,6,0	1/1:19,6:24:11.52:107,12,0	0/1:8,3:11:23.47:57,0,23	0/0:18,0:18:9.88:0,10,78	0/0:16,0:14:3.73:0,4,90	0/0:23,0:22:4.96:0,5,29	0/1:16,0:16:13.35:35,0,13	0/1:7,11:18:22.05:98,0,22	0/1:27,0:27:4.20:4,0,38	0/1:14,15:31:17.58:167,0,18	0/1:15,0:15:34.28:56,0,34	0/1:11,11:22:22.47:67,0,22	1/1:56,3:57:52.63:385,53,0	0/0:16,0:16:0.33:0,0,64	1/1:15,0:14:0.44:1,0,0	0/0:28,0:28:15.81:0,16,169	0/1:13,0:12:0.01:0,0,0	1/1:21,13:33:10.01:242,10,0	1/1:5,13:18:14.07:162,14,0	0/1:6,0:6:1.18:8,0,1
chr10	93404501	.	GTGTGTGTGTGTGTA	G	534.53	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=-0.217;DP=599;FS=0.835;HRun=0;HaplotypeScore=184.8812;InbreedingCoeff=0.3020;MQ=51.50;MQ0=30;MQRankSum=-1.656;QD=2.61;ReadPosRankSum=-2.592;VQSLOD=1.9618;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:37:18.39:165,0,18	1/1:6,0:5:2.04:6,2,0	0/0:29,0:7:12.40:0,12,107	0/1:41,0:11:11.62:12,0,47	0/0:14,0:11:14.90:0,15,254	0/1:11,0:11:0:0,0,0	0/1:27,0:24:50.27:86,0,50	0/0:17,0:13:23.97:0,24,284	0/0:14,0:14:14.69:0,15,313	0/0:24,0:23:44.37:0,44,671	0/0:11,0:11:21.03:0,21,495	0/0:13,0:13:18.01:0,18,572	0/0:16,0:14:29.80:0,30,655	0/0:18,0:17:15.05:0,15,359	1/1:15,0:15:15.02:209,15,0	0/0:21,0:21:23.87:0,24,626	1/1:8,17:25:3.01:121,3,0	0/1:35,0:35:22.82:23,0,1250	0/0:12,0:11:21.07:0,21,605	0/0:23,0:23:21.04:0,21,642	0/0:51,0:48:99:0,105,3458	0/0:19,0:19:39.08:0,39,1048	0/0:17,0:16:15.03:0,15,448	0/0:33,0:32:45.99:0,46,1395	0/0:15,0:14:9.42:0,9,70	0/0:28,0:27:62.24:0,62,1716	0/0:19,0:19:26.23:0,26,819	0/1:4,0:4:56.79:57,0,78
chr10	93404670	.	GACA	G	1777.87	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.591;DP=771;FS=3.836;HRun=0;HaplotypeScore=98.5887;InbreedingCoeff=0.9222;MQ=55.69;MQ0=4;MQRankSum=2.653;QD=39.51;ReadPosRankSum=2.646;VQSLOD=4.6312;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,169,3769	0/0:13,0:13:33.11:0,33,747	0/0:26,0:9:27.09:0,27,544	0/0:22,0:6:15.05:0,15,306	0/0:22,0:22:63.22:0,63,1428	0/0:18,0:17:48.16:0,48,1088	0/0:29,0:28:75.26:0,75,1681	0/0:25,0:25:69.23:0,69,1506	0/0:31,0:31:84.29:0,84,1849	0/0:37,0:37:99:0,111,2446	0/0:18,0:18:51.18:0,51,1137	0/0:23,0:23:69.20:0,69,1496	0/0:20,0:20:60.21:0,60,1328	0/0:25,0:25:72.25:0,72,1631	0/0:36,0:36:99:0,102,2311	0/0:26,0:26:72.25:0,72,1612	1/1:3,29:32:78.27:1299,78,0	0/0:21,1:22:4.20:0,4,1052	0/0:28,0:25:69.21:0,69,1469	0/0:23,0:23:69.24:0,69,1510	0/0:56,0:56:99:0,163,3629	0/0:28,0:28:84.28:0,84,1858	0/0:11,0:11:30.10:0,30,679	0/0:32,0:32:87.27:0,87,1883	0/0:21,0:21:60.21:0,60,1342	0/0:35,0:35:99:0,102,2313	0/0:41,0:41:99:0,117,2609	1/1:0,13:13:36.12:600,36,0
chr10	93405155	.	A	AT	13897.73	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-12.759;DP=625;FS=15.503;HRun=8;HaplotypeScore=56.7963;InbreedingCoeff=0.9955;MQ=75.09;MQ0=0;MQRankSum=-1.432;QD=28.89;ReadPosRankSum=1.542;VQSLOD=3.7990;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.04:0,81,740	0/0:9,0:9:21.01:0,21,192	0/0:15,0:15:24.34:0,24,291	0/0:10,0:10:13.88:0,14,158	1/1:2,27:29:78.20:886,78,0	0/0:26,0:26:56.98:0,57,509	0/0:21,0:22:62.05:0,62,550	1/1:6,32:38:96.22:1065,96,0	1/1:1,25:26:69.21:797,69,0	1/1:6,25:31:78.11:871,78,0	1/1:4,19:23:57.17:658,57,0	1/1:3,20:23:48.14:554,48,0	1/1:2,18:20:45.13:519,45,0	1/1:2,14:16:39.12:450,39,0	0/0:11,0:11:33.01:0,33,297	1/1:3,19:22:54.16:623,54,0	1/1:3,15:18:45.13:519,45,0	1/1:1,18:19:54.16:623,54,0	1/1:5,20:25:60.14:669,60,0	1/1:4,13:17:39.07:435,39,0	1/1:2,17:19:48.14:554,48,0	1/1:0,19:19:54.16:623,54,0	1/1:3,23:26:69.21:796,69,0	1/1:2,20:22:54.16:623,54,0	1/1:1,27:28:72.21:831,72,0	1/1:3,23:26:66.20:762,66,0	1/1:4,30:34:90.27:1037,90,0	0/0:22,0:22:54.03:0,54,494
chr10	93407092	.	T	TCC	2431.71	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.161;DP=540;FS=1.239;HRun=0;HaplotypeScore=65.6300;InbreedingCoeff=0.9980;MQ=85.23;MQ0=0;MQRankSum=-1.192;QD=45.88;ReadPosRankSum=0.429;VQSLOD=4.9489;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.27:0,87,1384	0/0:11,0:11:33.10:0,33,514	0/0:18,0:18:53.67:0,54,837	0/0:19,0:19:48.15:0,48,756	0/0:22,0:21:63.21:0,63,1017	1/1:0,23:24:63.22:1279,63,0	1/1:2,24:29:63.22:1274,63,0	0/0:16,0:16:48.16:0,48,783	0/0:9,0:9:27.09:0,27,441	0/0:25,0:25:75.23:0,75,1178	0/0:14,0:14:42.14:0,42,685	0/0:17,0:17:51.15:0,51,806	0/0:19,0:19:57.19:0,57,927	0/0:21,0:21:63.22:0,63,1028	0/0:11,0:11:33.10:0,33,513	0/0:20,0:19:57.17:0,57,882	0/0:17,0:17:51.17:0,51,810	0/0:19,0:19:51.17:0,51,817	0/0:16,0:16:42.14:0,42,683	0/0:14,0:14:33.57:0,34,628	0/0:27,0:27:81.28:0,81,1321	0/0:24,0:24:66.23:0,66,1073	0/0:24,0:24:72.23:0,72,1149	0/0:33,0:33:99:0,99,1586	0/0:9,0:9:24.08:0,24,392	0/0:21,0:21:60.20:0,60,979	0/0:13,0:12:39.13:0,39,625	0/0:17,0:17:51.17:0,51,828
chr10	93408321	.	AACACACACAC	A	2025.29	PASS	AB=0.875;AC=24;AF=0.462;AN=52;BaseQRankSum=5.766;DP=471;FS=15.241;HRun=0;HaplotypeScore=149.9541;InbreedingCoeff=0.5828;MQ=65.48;MQ0=13;MQRankSum=-6.051;QD=9.78;ReadPosRankSum=0.504;VQSLOD=1.8005;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,2:22:3.01:89,3,0	1/1:5,3:8:5.98:109,6,0	./.	./.	0/0:17,0:19:18.06:0,18,522	1/1:18,3:24:15.03:267,15,0	0/1:15,0:20:11.94:77,0,12	0/0:22,0:21:1.55:0,2,4	0/0:6,0:6:0:0,0,0	0/0:19,0:18:21.06:0,21,494	0/0:15,0:15:21.06:0,21,634	1/1:9,4:13:3.01:89,3,0	1/1:8,0:10:6.02:112,6,0	1/1:7,6:14:12.04:336,12,0	1/1:8,3:12:12.04:336,12,0	0/0:9,0:12:9.02:0,9,301	0/1:18,1:19:20.84:81,0,21	0/0:12,0:16:22.32:0,22,627	0/0:15,0:15:12.04:0,12,382	0/0:18,0:18:14.38:0,14,677	0/0:20,0:18:9.02:0,9,270	1/1:10,3:14:6.02:158,6,0	1/1:7,6:13:2.80:13,3,0	1/1:18,0:17:2.99:24,3,0	1/1:14,5:20:18.06:513,18,0	0/0:21,0:27:33.11:0,33,948	0/0:15,0:19:18.06:0,18,443	0/0:3,0:3:3.01:0,3,97
chr10	93408543	.	TAGAAA	T	1845.35	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.609;DP=613;FS=0.000;HRun=0;HaplotypeScore=108.4898;InbreedingCoeff=0.9724;MQ=80.92;MQ0=0;MQRankSum=-0.769;QD=45.01;ReadPosRankSum=2.917;VQSLOD=3.4416;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,3633	0/0:5,0:5:15.05:0,15,455	0/0:20,0:20:54.18:0,54,1414	0/0:13,0:13:24.08:0,24,663	0/0:24,0:24:60.16:0,60,1747	0/0:25,0:25:63.22:0,63,1818	0/0:18,0:18:42.14:0,42,1265	0/0:26,0:26:66.23:0,66,1959	0/0:23,0:23:60.21:0,60,1776	0/0:31,0:31:90.31:0,90,2571	0/0:15,0:15:33.10:0,33,932	0/0:10,0:10:24.08:0,24,679	0/0:14,0:14:42.14:0,42,1229	0/0:20,0:20:57.20:0,57,1710	0/0:22,0:22:60.21:0,60,1814	0/0:19,0:19:54.17:0,54,1448	1/1:2,39:41:96.33:1940,96,0	0/0:9,0:9:21.07:0,21,627	0/0:15,0:15:33.10:0,33,924	0/0:24,0:24:72.23:0,72,1996	0/0:41,0:41:99:0,120,3533	0/0:22,0:22:63.20:0,63,1835	0/0:23,0:23:69.24:0,69,2001	0/0:22,0:22:66.23:0,66,1958	0/0:23,0:23:66.23:0,66,2001	0/0:28,0:28:78.27:0,78,2313	0/0:30,0:30:75.26:0,75,2172	0/0:7,0:7:21.07:0,21,637
chr10	93409120	.	TGGGG	T	1356.99	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.672;DP=323;FS=2.883;HRun=6;HaplotypeScore=61.9885;InbreedingCoeff=0.8928;MQ=73.74;MQ0=0;MQRankSum=-2.029;QD=20.88;ReadPosRankSum=3.533;VQSLOD=-0.5312;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,14:20:38.98:585,39,0	1/1:1,5:6:9.03:158,9,0	0/0:7,0:7:21.07:0,21,545	0/0:15,0:15:21.95:0,22,672	0/0:12,0:12:26.36:0,26,606	1/1:11,0:11:8.95:67,9,0	1/1:18,0:18:36.62:293,37,0	0/0:18,0:18:39.12:0,39,769	0/0:9,0:9:21.06:0,21,461	0/0:6,0:6:15.05:0,15,357	0/0:10,0:10:21.07:0,21,512	0/0:8,0:8:18.06:0,18,439	0/0:3,0:3:6.02:0,6,164	0/0:14,0:14:27.08:0,27,684	1/1:2,8:10:24.08:420,24,0	0/0:9,0:9:27.05:0,27,623	0/0:11,0:11:9.28:0,9,56	0/0:23,0:23:66.23:0,66,1688	0/0:6,0:6:12:0,12,265	0/0:8,0:8:18.05:0,18,400	0/0:31,0:30:63.20:0,63,1521	0/0:10,0:10:14.01:0,14,270	0/0:11,0:11:21.03:0,21,388	0/0:10,0:10:27.03:0,27,578	0/0:6,0:6:9.03:0,9,199	0/0:14,0:14:36.06:0,36,836	0/0:9,0:9:27.09:0,27,673	0/0:8,0:8:12:0,12,211
chr10	93409125	.	GGT	G	1227.33	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=6.505;DP=282;FS=16.358;HRun=0;HaplotypeScore=45.1241;InbreedingCoeff=0.8070;MQ=74.85;MQ0=0;MQRankSum=-3.091;QD=17.79;ReadPosRankSum=0.838;VQSLOD=2.0381;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:38.84:308,39,0	1/1:5,0:5:8.99:75,9,0	0/0:9,0:9:27.08:0,27,387	0/0:14,0:14:17.89:0,18,382	0/0:10,0:10:21.15:0,21,296	1/1:0,8:8:9.03:134,9,0	1/1:2,17:19:36.12:520,36,0	0/0:17,0:17:19.87:0,20,340	0/0:10,0:10:26.22:0,26,285	0/0:6,0:6:12.02:0,12,191	0/0:9,0:9:23.91:0,24,284	0/0:7,0:7:20.78:0,21,218	0/0:2,0:2:6.02:0,6,93	0/0:9,0:9:24.08:0,24,376	1/1:9,0:9:23.97:199,24,0	0/0:8,0:8:21.05:0,21,328	1/1:9,0:9:20.93:167,21,0	0/0:24,0:24:48.13:0,48,907	0/0:5,0:5:8.98:0,9,139	0/0:7,0:7:9.86:0,10,194	0/0:25,0:24:57.58:0,58,809	0/0:5,0:5:8.97:0,9,134	0/0:9,0:9:17.79:0,18,178	0/0:9,0:9:5.86:0,6,229	0/1:3,0:3:5.14:5,0,73	0/0:13,0:13:32.45:0,32,433	0/0:10,0:10:29.41:0,29,376	0/0:5,0:5:8.96:0,9,115
chr10	93409761	.	GTGTT	G	915.66	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.833;DP=849;FS=0.000;HRun=0;HaplotypeScore=160.2529;InbreedingCoeff=0.8302;MQ=61.54;MQ0=2;MQRankSum=3.204;QD=27.75;ReadPosRankSum=2.756;VQSLOD=3.6435;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:71,0:73:99:0,162,2763	0/0:8,0:8:15.05:0,15,261	0/0:46,0:36:21.07:0,21,462	0/0:34,0:22:24.08:0,24,523	0/0:27,0:27:42.14:0,42,1009	0/0:14,0:14:30.10:0,30,497	0/0:20,0:20:21.06:0,21,327	0/0:38,0:38:45.13:0,45,975	0/0:32,0:32:66.23:0,66,1573	0/0:35,0:35:84.28:0,84,1947	0/0:25,1:26:2.97:0,3,1054	0/0:28,0:28:63.22:0,63,1516	0/0:28,0:28:72.25:0,72,1699	0/0:38,0:38:84.29:0,84,2020	0/0:35,0:35:78.27:0,78,1376	0/0:21,0:21:45.15:0,45,1068	1/1:8,25:33:62.49:1010,62,0	0/0:28,0:27:54.18:0,54,1294	0/0:33,0:33:39.12:0,39,892	0/0:23,0:23:36.12:0,36,838	0/0:43,1:44:42.13:0,42,1997	0/0:23,0:23:42.12:0,42,917	0/0:18,0:18:30.10:0,30,698	0/0:41,0:41:93.79:0,94,2202	0/0:18,0:18:42.14:0,42,983	0/0:31,0:31:63.22:0,63,1502	0/0:33,0:33:69.24:0,69,1640	0/0:11,0:21:36.12:0,36,629
chr10	93409780	.	T	TTTGTTTGC	3148.10	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=10.706;DP=830;FS=1.257;HRun=0;HaplotypeScore=217.2084;InbreedingCoeff=0.5081;MQ=58.90;MQ0=3;MQRankSum=2.608;QD=16.57;ReadPosRankSum=4.781;VQSLOD=2.2007;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:64,0:64:21.95:722,0,22	1/1:5,0:5:14.80:154,15,0	0/0:37,0:23:40.84:0,41,611	0/0:38,0:25:51.30:0,51,674	0/0:21,0:21:57.05:0,57,1260	1/1:1,14:18:30.10:1292,30,0	1/1:2,23:27:21.07:777,21,0	0/0:40,0:40:99:0,99,1480	0/0:26,0:26:78.22:0,78,1854	0/0:32,0:32:93.23:0,93,2190	0/0:28,0:28:75.11:0,75,1452	0/0:30,0:30:84.21:0,84,1884	0/0:29,0:29:87.23:0,87,1961	0/0:37,0:37:98.62:0,99,2395	0/1:34,0:34:99:252,0,105	0/0:32,0:32:81.11:0,81,1394	0/0:32,0:32:81.21:0,81,1453	0/0:29,0:29:75.11:0,75,1577	0/0:26,0:25:50.63:0,51,1042	0/0:22,0:22:54.11:0,54,1053	0/0:42,0:42:99:0,121,2630	0/0:24,0:24:69.03:0,69,1223	0/1:24,0:24:21.52:22,0,749	0/0:38,0:38:99:0,111,2513	0/0:18,0:18:48.07:0,48,1124	0/0:28,0:28:81.22:0,81,1800	0/0:31,0:31:84.21:0,84,1988	0/1:18,0:18:91.07:91,0,106
chr10	93409794	.	T	TG	1325.19	PASS	AB=0.604;AC=4;AF=0.071;AN=56;BaseQRankSum=12.122;DP=816;FS=3.977;HRun=0;HaplotypeScore=112.3682;InbreedingCoeff=0.3907;MQ=63.82;MQ0=2;MQRankSum=2.969;QD=12.62;ReadPosRankSum=3.462;VQSLOD=4.8416;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,43:70:99:898,0,180	1/1:3,2:5:14.95:125,15,0	0/0:29,0:22:63.14:0,63,838	0/0:26,0:20:53.93:0,54,684	0/0:21,0:21:63.21:0,63,880	0/0:19,0:19:35.81:0,36,235	0/0:22,0:22:28.30:0,28,218	0/0:37,0:37:99:0,111,1504	0/0:30,0:30:90.30:0,90,1253	0/0:33,0:33:96.32:0,96,1324	0/0:24,0:24:72.21:0,72,986	0/0:37,0:37:99:0,111,1502	0/0:30,0:30:90.25:0,90,1218	0/0:34,0:34:99:0,102,1411	0/1:9,21:30:34.13:414,0,34	0/0:30,0:30:90.28:0,90,1225	0/0:37,0:37:98.76:0,99,957	0/0:27,0:27:78.26:0,78,1089	0/0:25,0:24:66.21:0,66,903	0/0:21,0:21:63.16:0,63,803	0/0:44,0:44:99:0,132,1759	0/0:25,0:25:75.24:0,75,1020	0/0:21,0:21:62.68:0,63,830	0/0:38,0:38:99:0,111,1551	0/0:16,0:16:48.16:0,48,671	0/0:31,0:31:93.30:0,93,1283	0/0:42,0:42:99:0,123,1688	0/0:12,0:12:0.91:0,1,36
chr10	93409795	.	T	TTTG	3358.69	PASS	AB=0.604;AC=4;AF=0.071;AN=56;BaseQRankSum=11.656;DP=815;FS=1.948;HRun=0;HaplotypeScore=137.9869;InbreedingCoeff=0.4241;MQ=64.43;MQ0=2;MQRankSum=0.260;QD=31.99;ReadPosRankSum=2.202;VQSLOD=4.3867;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,42:71:99:2123,0,104	1/1:3,2:5:12.04:202,12,0	0/0:29,0:22:59.38:0,59,1024	0/0:26,0:20:51.57:0,52,675	0/0:21,0:21:63.22:0,63,1126	0/0:19,0:19:21.53:0,22,195	0/0:22,0:22:24.68:0,25,201	0/0:37,0:37:99:0,108,1847	0/0:30,0:30:90.29:0,90,1574	0/0:34,0:34:96.30:0,96,1657	0/0:24,0:24:72.25:0,72,1283	0/0:37,0:37:99:0,111,1879	0/0:29,0:29:87.29:0,87,1525	0/0:34,0:34:99:0,102,1799	0/1:8,21:29:12.10:1033,0,12	0/0:29,0:29:87.29:0,87,1530	0/0:37,0:37:99:0,99,1672	0/0:26,0:26:78.27:0,78,1391	0/0:25,0:24:69.18:0,69,1138	0/0:20,0:20:60.13:0,60,957	0/0:44,0:44:99:0,132,2241	0/0:26,0:26:75.24:0,75,1294	0/0:20,0:20:60.20:0,60,1046	0/0:39,0:39:99:0,114,2038	0/0:17,0:17:48.16:0,48,849	0/0:31,0:31:93.31:0,93,1634	0/0:42,0:42:99:0,126,2134	0/0:12,0:12:4.53:0,5,74
chr10	93413049	.	CCCCGCCCCCCT	C	2215.78	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.140;DP=395;FS=6.561;HRun=0;HaplotypeScore=129.8443;InbreedingCoeff=0.9000;MQ=78.49;MQ0=0;MQRankSum=-7.807;QD=67.14;ReadPosRankSum=2.081;VQSLOD=2.8575;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:48.16:0,48,2557	0/0:3,0:3:6.02:0,6,265	0/0:11,0:11:30.10:0,30,1420	0/0:12,0:12:15.14:0,15,704	0/0:9,0:9:20.38:0,20,1132	1/1:1,15:16:42.11:1334,42,0	1/1:3,14:17:33.07:1003,33,0	0/0:18,0:18:36.11:0,36,1399	0/0:18,0:18:48.16:0,48,2612	0/0:16,0:16:36.10:0,36,1475	0/0:8,0:8:21.07:0,21,1076	0/0:17,0:17:46.40:0,46,1961	0/0:15,0:15:38.92:0,39,1845	0/0:15,0:15:39.13:0,39,2042	0/0:19,0:19:48.16:0,48,2497	0/0:13,0:13:36.12:0,36,1586	0/0:26,0:26:69.24:0,69,3545	0/0:14,0:14:33.11:0,33,1781	0/0:10,0:10:24.08:0,24,1228	0/0:10,0:10:21.07:0,21,1083	0/0:36,0:36:93.32:0,93,5045	0/0:7,0:7:18.06:0,18,986	0/0:6,0:6:18.05:0,18,696	0/0:19,0:19:51.18:0,51,2681	0/0:12,0:12:36.11:0,36,1692	0/0:11,0:11:27.08:0,27,1190	0/0:14,0:13:36.12:0,36,1889	0/0:3,0:3:9.03:0,9,463
chr10	93413089	.	AC	A	686.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.702;DP=420;FS=2.913;HRun=3;HaplotypeScore=57.0119;InbreedingCoeff=0.9071;MQ=89.88;MQ0=0;MQRankSum=-0.830;QD=27.44;ReadPosRankSum=2.817;VQSLOD=2.8368;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.32:0,96,1375	0/0:6,0:6:18.03:0,18,238	0/0:14,0:14:42.14:0,42,580	0/0:20,0:20:53.88:0,54,668	0/0:11,0:11:30.10:0,30,432	0/0:20,0:20:51.17:0,51,732	0/0:24,0:24:60.19:0,60,838	0/0:24,0:24:66.22:0,66,934	0/0:20,0:20:57.19:0,57,819	0/0:13,0:13:36.12:0,36,518	0/0:8,0:8:24.08:0,24,344	0/0:10,0:10:30.10:0,30,432	0/0:11,0:11:29.94:0,30,400	0/0:12,0:12:36.12:0,36,518	0/0:17,0:17:48.16:0,48,689	0/0:7,0:7:21.06:0,21,285	1/1:3,22:25:63.20:781,63,0	0/0:15,0:15:42.14:0,42,602	0/0:7,0:7:15.05:0,15,211	0/0:6,0:6:18.06:0,18,259	0/0:31,0:31:93.29:0,93,1301	0/0:8,0:8:24.08:0,24,345	0/0:9,0:9:24.05:0,24,344	0/0:21,0:21:57.12:0,57,790	0/0:20,0:20:57.19:0,57,819	0/0:15,0:15:45.15:0,45,647	0/0:11,0:10:33.11:0,33,473	0/0:3,0:3:9.03:0,9,128
chr10	93414161	.	G	GGTTTT	1424.43	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=0.668;DP=620;FS=3.623;HRun=0;HaplotypeScore=139.5733;InbreedingCoeff=0.5613;MQ=77.43;MQ0=5;MQRankSum=-3.298;QD=15.83;ReadPosRankSum=-2.100;VQSLOD=2.5701;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:25:5.49:5,0,228	0/0:8,0:8:1.61:0,2,33	0/0:39,0:18:18.58:0,19,232	0/0:40,0:22:12.21:0,12,261	0/0:32,0:32:46.60:0,47,795	1/1:17,4:21:27.08:675,27,0	1/1:20,3:23:38.95:862,39,0	0/0:26,0:25:13.82:0,14,441	0/0:20,0:20:41.41:0,41,448	0/0:34,0:34:52.97:0,53,774	0/0:17,0:17:39.80:0,40,460	0/0:22,0:21:29.32:0,29,214	0/1:19,0:19:12.53:13,0,125	0/0:17,0:17:26.31:0,26,207	0/0:15,0:15:23.04:0,23,171	0/0:13,0:13:9.64:0,10,269	0/0:38,0:38:98.69:0,99,1481	0/0:20,0:20:38.78:0,39,434	0/0:27,0:26:40.38:0,40,425	0/0:23,0:23:46.91:0,47,457	0/0:16,0:16:30.02:0,30,308	0/0:19,0:19:15.10:0,15,208	0/0:20,0:20:28.26:0,28,233	0/0:18,0:18:23.30:0,23,238	0/0:18,0:18:25.67:0,26,183	0/0:19,0:19:45.44:0,45,439	0/0:16,0:16:14.94:0,15,153	0/0:13,0:13:9.36:0,9,61
chr10	93414167	.	G	GGT	256.67	PASS	AB=0.603;AC=13;AF=0.232;AN=56;BaseQRankSum=6.993;DP=660;FS=4.677;HRun=0;HaplotypeScore=104.8368;InbreedingCoeff=-0.0876;MQ=75.58;MQ0=6;MQRankSum=-2.628;QD=1.06;ReadPosRankSum=2.628;VQSLOD=1.7539;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:30:48.61:49,0,175	0/1:3,0:8:9.65:10,0,49	0/0:45,0:21:26.64:0,27,375	0/0:39,0:20:18.37:0,18,267	0/0:12,0:35:41.45:0,41,490	0/1:10,0:26:21.69:22,0,118	1/1:3,0:21:22.35:101,22,0	0/0:13,0:25:25.53:0,26,369	0/0:9,0:19:46.66:0,47,401	0/0:17,0:35:46.96:0,47,644	0/0:5,0:16:24.38:0,24,284	0/1:6,0:24:19.40:19,0,114	0/1:9,0:20:41.12:41,0,137	0/1:7,0:15:3.01:3,0,145	0/1:5,0:18:13.58:14,0,109	0/0:11,0:11:30.39:0,30,282	0/0:3,0:40:76.05:0,76,1012	0/0:11,2:24:32.65:0,33,349	0/0:17,0:27:60.37:0,60,515	0/0:8,0:27:17.27:0,17,326	0/0:8,0:20:29.40:0,29,235	0/1:7,0:21:42.36:42,0,142	0/1:6,0:20:42.71:43,0,91	0/0:8,0:19:11.68:0,12,144	0/1:3,0:25:47.26:47,0,49	0/0:17,0:18:37.02:0,37,380	0/0:5,0:15:17.56:0,18,152	0/1:3,0:11:21.97:22,0,58
chr10	93414452	.	G	GTGTC	2342.01	PASS	AB=0.800;AC=5;AF=0.089;AN=56;BaseQRankSum=-2.696;DP=675;FS=3.802;HRun=0;HaplotypeScore=109.5387;InbreedingCoeff=0.7994;MQ=74.46;MQ0=3;MQRankSum=-2.210;QD=30.03;ReadPosRankSum=-0.290;VQSLOD=3.1163;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:84.28:0,84,1373	0/0:5,0:5:15.03:0,15,202	0/0:38,0:31:40.91:0,41,568	0/0:36,0:30:38.05:0,38,433	0/0:24,0:24:54.11:0,54,789	1/1:1,25:26:51.18:1258,51,0	1/1:6,21:28:27.09:666,27,0	0/0:30,0:30:36.40:0,36,758	0/0:25,0:25:57.15:0,57,868	0/0:32,0:32:72.17:0,72,1056	0/0:18,0:18:48.11:0,48,680	0/0:21,0:21:45.13:0,45,702	0/0:18,0:18:42.11:0,42,645	0/0:25,0:25:66.19:0,66,1003	0/0:29,0:29:66.22:0,66,1074	0/0:22,0:22:54.15:0,54,827	0/1:18,0:24:7.84:548,0,8	0/0:29,0:29:66.20:0,66,1051	0/0:20,0:19:39.08:0,39,498	0/0:16,0:16:42.10:0,42,650	0/0:33,0:33:72.20:0,72,1104	0/0:28,0:29:72.20:0,72,1048	0/0:16,0:16:45.15:0,45,749	0/0:26,0:26:66.14:0,66,953	0/0:17,0:17:48.13:0,48,728	0/0:18,0:18:39.13:0,39,627	0/0:30,0:30:75.19:0,75,1116	0/0:5,0:5:12.04:0,12,200
chr10	93414928	.	GGTT	G	661.57	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.882;DP=457;FS=0.000;HRun=0;HaplotypeScore=90.3930;InbreedingCoeff=0.7403;MQ=77.59;MQ0=0;MQRankSum=-1.872;QD=26.46;ReadPosRankSum=2.728;VQSLOD=3.7697;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:26.86:0,27,213	0/0:5,0:5:8.75:0,9,77	0/0:25,0:16:17.27:0,17,295	0/0:18,0:15:30.14:0,30,250	0/0:26,0:26:77.94:0,78,1062	0/0:13,0:13:32.90:0,33,404	0/0:13,0:12:32.88:0,33,299	0/0:20,0:20:57.45:0,57,769	0/0:10,0:11:33.04:0,33,515	0/0:22,0:22:66.01:0,66,959	0/0:25,0:25:71.89:0,72,813	0/0:7,0:7:17.93:0,18,151	0/0:9,0:9:26.93:0,27,285	0/0:8,0:8:20.85:0,21,171	0/0:10,0:10:17.98:0,18,180	0/0:22,0:22:63.95:0,64,841	1/1:10,13:25:62.21:756,62,0	0/0:22,0:22:63.03:0,63,1043	0/0:17,0:17:50.97:0,51,669	0/0:26,0:26:74.92:0,75,912	0/0:14,0:14:30.02:0,30,399	0/0:12,0:12:18.64:0,19,118	0/0:11,0:11:19.05:0,19,202	0/0:14,0:14:31.30:0,31,215	0/0:18,0:18:0.98:0,1,216	0/0:20,0:20:57.84:0,58,851	0/0:17,0:17:47.91:0,48,639	0/0:8,0:8:24:0,24,323
chr10	93415001	.	T	TGG	844.32	PASS	AB=0.921;AC=11;AF=0.196;AN=56;BaseQRankSum=-1.002;DP=365;FS=0.652;HRun=0;HaplotypeScore=112.3208;InbreedingCoeff=-0.2299;MQ=32.67;MQ0=15;MQRankSum=1.493;QD=5.95;ReadPosRankSum=-0.203;VQSLOD=2.9631;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:41.89:0,42,407	0/0:15,0:15:44.37:0,44,462	0/0:11,0:1:3.01:0,3,35	0/0:22,0:4:4.08:0,4,32	0/1:19,1:17:56.29:56,0,108	0/0:15,0:14:24.08:0,24,311	0/0:8,0:7:17.97:0,18,189	0/1:13,0:13:73.97:219,0,74	0/0:15,0:14:33.71:0,34,175	0/1:19,0:18:99:135,0,140	0/1:11,0:11:59.49:59,0,85	0/0:8,0:6:18.01:0,18,201	0/0:3,0:3:9.03:0,9,112	0/0:9,0:8:17.90:0,18,186	0/0:16,0:16:44.01:0,44,427	0/1:12,3:15:73.18:77,0,73	0/0:24,0:23:51.42:0,51,492	0/1:9,1:10:7.54:8,0,63	0/1:11,0:10:39.24:39,0,97	0/1:10,2:12:45.06:140,0,45	0/1:4,2:5:27.05:60,0,27	0/0:4,0:4:12.04:0,12,147	0/0:6,0:5:15.04:0,15,170	0/0:2,0:1:2.74:0,3,12	0/0:20,0:18:42.12:0,42,491	0/1:16,1:16:78.45:147,0,78	0/1:7,1:8:5.69:48,0,6	0/0:24,0:23:51.82:0,52,542
chr10	93415011	.	TGGG	T	1053.41	PASS	AB=0.842;AC=21;AF=0.404;AN=52;BaseQRankSum=6.909;DP=316;FS=1.773;HRun=3;HaplotypeScore=108.6364;InbreedingCoeff=-0.3314;MQ=32.34;MQ0=5;MQRankSum=-0.964;QD=5.32;ReadPosRankSum=5.533;VQSLOD=-0.3402;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,3:15:99:123,0,115	0/1:7,0:8:66.06:67,0,66	./.	./.	0/1:17,0:16:10.27:13,0,10	0/0:10,1:10:12.04:0,12,146	0/1:7,1:7:25.13:25,0,48	0/0:14,0:14:14.22:0,14,100	1/1:15,0:14:13.25:33,13,0	0/1:22,0:22:13.59:14,0,81	0/1:11,0:11:7.08:7,0,42	0/1:8,1:7:23.52:24,0,101	0/1:4,2:6:28.01:86,0,28	0/1:4,2:6:40.90:48,0,41	0/1:7,6:13:64.31:93,0,64	0/0:14,0:13:1.96:0,2,56	0/0:20,0:18:7.60:0,8,130	0/1:9,0:9:1.77:2,0,25	0/0:16,0:16:23.76:0,24,171	1/1:11,0:11:0.03:29,0,0	0/0:6,0:4:2.01:0,2,24	0/1:5,1:6:41.18:41,0,57	0/1:3,3:5:10:96,0,10	1/1:2,0:1:2.68:11,3,0	0/1:5,8:12:21.46:321,0,21	0/0:18,0:17:2.86:0,3,72	0/0:7,0:7:3.12:0,3,39	0/1:15,5:20:99:166,0,158
chr10	93416640	.	AG	A	425.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.515;DP=501;FS=1.059;HRun=3;HaplotypeScore=57.6553;InbreedingCoeff=0.7368;MQ=46.77;MQ0=37;MQRankSum=-1.633;QD=18.50;ReadPosRankSum=3.022;VQSLOD=3.2576;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:39.12:0,39,497	0/0:2,0:2:3.01:0,3,40	0/0:32,0:8:21.06:0,21,273	0/0:59,0:10:21.06:0,21,277	0/0:13,0:13:27.09:0,27,385	0/0:17,0:17:42.11:0,42,527	0/0:25,0:21:49.54:0,50,664	0/0:35,0:30:68.98:0,69,871	0/0:15,0:12:21.02:0,21,278	0/0:18,0:18:41.62:0,42,499	0/0:12,0:12:24.08:0,24,346	0/0:10,0:6:14.98:0,15,160	0/0:5,0:5:12.03:0,12,145	0/0:12,0:10:30.10:0,30,393	0/0:10,0:9:27.09:0,27,353	0/0:16,0:14:30.57:0,31,424	1/1:6,17:18:27.34:519,27,0	0/0:15,0:14:39.13:0,39,543	0/0:15,0:14:39.13:0,39,553	0/0:16,0:15:36.12:0,36,510	0/0:26,0:23:57.15:0,57,790	0/0:14,0:13:30.10:0,30,389	0/0:18,0:16:45.15:0,45,585	0/0:14,0:12:21.25:0,21,280	0/0:18,0:16:36.12:0,36,464	0/0:24,0:21:55.43:0,55,768	0/0:12,0:12:36.12:0,36,506	0/0:3,0:2:6.02:0,6,78
chr10	93417419	.	CG	C	804.36	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.031;DP=623;FS=0.000;HRun=4;HaplotypeScore=58.4281;InbreedingCoeff=0.9965;MQ=92.32;MQ0=0;MQRankSum=-2.620;QD=27.74;ReadPosRankSum=1.929;VQSLOD=2.9750;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,141,1931	0/0:10,0:10:27.05:0,27,342	0/0:30,0:30:78.10:0,78,1013	0/0:21,0:21:57.16:0,57,749	0/0:25,0:25:63.21:0,63,877	0/0:24,0:24:72.23:0,72,991	0/0:33,0:33:96.28:0,96,1302	0/0:25,0:25:66.21:0,66,892	0/0:26,0:26:75.22:0,75,1015	0/0:18,0:18:54.13:0,54,702	0/0:11,0:11:33.10:0,33,445	0/0:13,0:13:39.13:0,39,545	0/0:14,0:14:39.12:0,39,528	0/0:19,0:19:57.19:0,57,797	0/0:20,0:20:57.19:0,57,797	0/0:13,0:13:39.12:0,39,529	1/1:1,28:29:75.23:899,75,0	0/0:17,0:17:48.15:0,48,654	0/0:24,0:24:69.22:0,69,950	0/0:30,0:30:87.24:0,87,1182	0/0:33,0:33:90.29:0,90,1241	0/0:21,0:21:54.17:0,54,732	0/0:21,0:21:57.18:0,57,780	0/0:20,0:20:54.17:0,54,739	0/0:24,0:24:66.22:0,66,922	0/0:20,0:20:60.20:0,60,838	0/0:23,0:23:66.22:0,66,922	0/0:8,0:8:24.08:0,24,336
chr10	93418510	.	TGA	T	636.21	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.640;DP=407;FS=9.792;HRun=0;HaplotypeScore=61.0205;InbreedingCoeff=0.8981;MQ=80.48;MQ0=1;MQRankSum=-4.212;QD=23.56;ReadPosRankSum=1.196;VQSLOD=3.7783;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:72.23:0,72,1344	0/0:4,0:4:9.03:0,9,173	0/0:21,0:17:45.62:0,46,768	0/0:17,0:13:22.63:0,23,373	0/0:9,0:9:21.04:0,21,368	1/1:2,7:9:18.05:234,18,0	1/1:1,17:17:41.27:522,41,0	0/0:36,0:36:99:0,102,1906	0/0:15,0:15:42.14:0,42,797	0/0:10,0:10:27.09:0,27,492	0/0:9,0:9:24.08:0,24,463	0/0:13,0:13:36.12:0,36,650	0/0:11,0:11:33.11:0,33,614	0/0:7,0:7:21.06:0,21,372	0/0:14,0:14:39.13:0,39,741	0/0:11,0:11:30.10:0,30,579	0/0:28,0:27:63.20:0,63,1192	0/0:23,0:23:66.20:0,66,1201	0/0:21,0:21:57.17:0,57,1053	0/0:10,0:10:27.08:0,27,480	0/0:18,0:18:45.11:0,45,761	0/0:3,0:3:9.03:0,9,174	0/0:3,0:3:8.99:0,9,135	0/0:17,0:17:45.06:0,45,760	0/0:11,0:11:33.11:0,33,616	0/0:19,0:19:54.16:0,54,950	0/0:14,0:14:39.07:0,39,669	0/0:6,0:6:15.05:0,15,268
chr10	93418533	.	C	CT	368.54	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=2.928;DP=408;FS=11.029;HRun=7;HaplotypeScore=49.5000;InbreedingCoeff=0.5275;MQ=52.76;MQ0=17;MQRankSum=0.945;QD=8.77;ReadPosRankSum=-1.591;VQSLOD=-0.0599;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:69.06:0,69,655	0/0:2,0:2:6.01:0,6,57	1/1:8,0:4:2.37:8,2,0	0/1:7,0:4:13.79:21,0,14	0/0:12,0:11:18.01:0,18,169	0/0:22,0:21:24.67:0,25,293	0/0:16,0:13:9.76:0,10,162	0/0:33,0:31:56.87:0,57,550	0/0:17,0:16:39.04:0,39,375	0/0:10,0:9:18.02:0,18,174	0/0:11,0:10:23.87:0,24,222	0/0:14,0:13:17.98:0,18,174	0/0:10,0:10:11.99:0,12,116	0/0:16,0:15:26.17:0,26,258	0/0:15,0:15:30.01:0,30,281	0/0:13,0:12:29.71:0,30,289	1/1:14,13:24:39.10:451,39,0	0/0:23,0:21:39.02:0,39,370	0/0:15,0:14:18.02:0,18,174	0/0:8,0:7:11.97:0,12,116	0/0:13,0:13:26.98:0,27,251	0/0:2,0:2:6.01:0,6,58	0/0:5,0:4:9.01:0,9,87	0/0:16,0:16:6.53:0,7,331	0/0:13,0:11:24:0,24,217	0/0:22,0:20:45.05:0,45,432	0/0:15,0:15:27.03:0,27,259	0/0:8,0:8:9:0,9,87
chr10	93418679	.	TG	T	525.95	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.172;DP=419;FS=6.282;HRun=2;HaplotypeScore=46.6632;InbreedingCoeff=0.8338;MQ=80.75;MQ0=0;MQRankSum=-4.364;QD=25.05;ReadPosRankSum=-1.265;VQSLOD=2.6560;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.22:0,75,1067	0/0:9,0:9:27.08:0,27,383	0/0:16,0:16:25.35:0,25,466	0/0:12,0:12:6.09:0,6,125	0/0:31,0:31:90.28:0,90,1302	0/0:21,0:21:62.90:0,63,770	0/0:11,0:11:32.67:0,33,309	0/0:27,0:27:81.23:0,81,1118	0/0:4,0:4:12.04:0,12,179	0/0:18,0:18:54.17:0,54,774	0/0:15,0:15:33.11:0,33,483	0/0:13,0:13:39.09:0,39,506	0/0:10,0:10:27:0,27,336	0/0:8,0:8:24:0,24,330	0/0:12,0:12:36.10:0,36,502	0/0:4,0:4:12.02:0,12,144	1/1:5,16:20:56.68:621,57,0	0/0:16,0:16:48.15:0,48,697	0/0:12,0:12:35.29:0,35,441	0/0:16,0:16:45.13:0,45,632	0/0:19,0:19:57.18:0,57,833	0/0:8,0:8:24.06:0,24,337	0/0:8,0:8:17.84:0,18,184	0/0:5,0:5:15.03:0,15,203	0/0:16,0:16:48.13:0,48,660	0/0:29,0:29:87.12:0,87,1185	0/0:14,0:14:39.06:0,39,556	0/0:15,0:15:45.08:0,45,589
chr10	93418699	.	G	GTATA	789.25	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.146;DP=419;FS=10.292;HRun=0;HaplotypeScore=73.5794;InbreedingCoeff=0.5617;MQ=74.57;MQ0=3;MQRankSum=-2.741;QD=32.89;ReadPosRankSum=-1.303;VQSLOD=2.4813;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:57.16:0,57,939	0/0:9,0:9:21.05:0,21,338	0/0:12,0:9:1.56:0,2,55	0/0:20,0:18:1.71:0,2,198	0/0:31,0:31:75.15:0,75,1311	0/0:14,0:14:36.12:0,36,629	0/0:8,0:8:12.04:0,12,210	0/0:29,0:29:84.19:0,84,1282	0/0:5,0:5:12.04:0,12,210	0/0:23,0:23:60.19:0,60,994	0/0:16,0:16:39.06:0,39,567	0/0:10,0:10:21.05:0,21,338	0/0:9,0:9:21.07:0,21,367	0/0:10,0:10:24.05:0,24,364	0/0:8,0:8:18.06:0,18,310	0/0:5,0:5:12.01:0,12,179	1/1:8,15:23:36.12:883,36,0	0/0:18,0:18:42.13:0,42,704	0/0:16,0:16:45.08:0,45,699	0/0:17,0:17:48.09:0,48,700	0/0:16,0:16:36.08:0,36,571	0/0:7,0:7:21.06:0,21,337	0/0:10,0:10:17.91:0,18,240	0/0:3,0:3:3.01:0,3,53	0/0:14,0:14:36.12:0,36,622	0/0:27,0:27:63.19:0,63,1047	0/0:23,0:23:54.17:0,54,898	0/0:8,0:8:21.07:0,21,368
chr10	93419895	.	G	GC	2335.19	PASS	AB=0.691;AC=39;AF=0.696;AN=56;BaseQRankSum=-7.282;DP=343;FS=15.976;HRun=10;HaplotypeScore=49.4082;InbreedingCoeff=0.2249;MQ=71.57;MQ0=0;MQRankSum=-1.658;QD=7.97;ReadPosRankSum=0.717;VQSLOD=0.4288;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:7,14:22:7.43:169,0,7	0/0:3,0:3:1.24:0,1,3	0/1:11,1:10:32.49:32,0,61	0/0:12,0:11:5.31:0,5,34	1/1:3,7:10:12.03:128,12,0	0/0:2,0:15:25.40:0,25,89	0/0:2,0:20:34.61:0,35,100	0/1:8,5:14:15.11:45,0,15	1/1:7,7:14:18.05:192,18,0	1/1:3,5:8:12.03:128,12,0	1/1:5,4:9:6.49:65,6,0	1/1:5,5:10:6.02:64,6,0	1/1:0,5:5:3.01:32,3,0	1/1:3,5:8:9.02:96,9,0	1/1:2,10:12:24.06:255,24,0	1/1:2,11:13:20.95:208,21,0	1/1:6,2:23:23.36:132,23,0	0/1:4,14:18:3.59:171,0,4	1/1:7,5:12:14.99:141,15,0	0/1:1,0:2:0:0,0,0	1/1:12,13:25:12.50:129,13,0	1/1:4,3:7:9.02:96,9,0	1/1:4,2:6:3.01:32,3,0	0/1:7,11:18:13.05:84,0,13	0/1:3,4:7:15.60:55,0,16	0/1:12,5:17:12.08:78,0,12	1/1:4,9:13:15.04:160,15,0	0/1:5,3:8:0:0,0,0
chr10	93421409	.	A	ATG	610.80	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.763;DP=1082;FS=3.428;HRun=0;HaplotypeScore=159.1181;InbreedingCoeff=0.9678;MQ=60.47;MQ0=10;MQRankSum=0.074;QD=17.96;ReadPosRankSum=-0.377;VQSLOD=3.5712;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,157,2004	0/0:11,0:11:30.10:0,30,386	0/0:44,0:19:12.39:0,12,338	0/0:49,0:25:38.37:0,38,346	0/0:34,0:34:87.27:0,87,1105	0/0:28,0:28:69.08:0,69,869	0/0:34,0:34:69.04:0,69,872	0/0:52,0:52:99:0,117,1477	0/0:43,0:43:99:0,108,1389	0/0:48,0:48:99:0,123,1530	0/0:26,0:26:63.19:0,63,796	0/0:37,0:37:90.16:0,90,1158	0/0:37,0:37:96.31:0,96,1231	0/0:51,0:51:99:0,135,1737	0/0:44,0:43:99:0,105,1347	0/0:35,0:35:93.28:0,93,1173	1/1:9,24:34:41.03:706,41,0	0/0:46,0:45:99:0,111,1428	0/0:16,0:14:21.07:0,21,270	0/0:25,0:25:75.23:0,75,951	0/0:121,0:119:99:0,289,3670	0/0:25,0:25:66.21:0,66,849	0/0:26,0:26:69.21:0,69,873	0/0:46,0:46:99:0,108,1373	0/0:29,0:29:60.40:0,60,844	0/0:41,0:41:99:0,117,1491	0/0:20,0:20:54.18:0,54,695	0/0:16,0:16:33.11:0,33,423
chr10	93421499	.	GTGTC	G	211.67	PASS	AB=0.647;AC=3;AF=0.054;AN=56;BaseQRankSum=5.171;DP=867;FS=0.000;HRun=0;HaplotypeScore=182.4109;InbreedingCoeff=0.5910;MQ=56.35;MQ0=3;MQRankSum=-3.573;QD=3.78;ReadPosRankSum=-0.697;VQSLOD=2.3841;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:44:80.45:0,80,1806	0/0:10,0:10:9.45:0,9,171	0/0:33,0:21:33.11:0,33,789	0/0:51,0:39:66.01:0,66,1391	0/0:19,0:19:33.11:0,33,824	0/1:15,18:33:27.56:28,0,504	0/0:21,17:38:33.63:0,34,790	0/0:48,0:47:99:0,102,2265	0/0:40,0:40:95.95:0,96,2122	0/0:28,0:28:69.24:0,69,1671	0/0:20,0:20:39.12:0,39,889	0/0:27,0:27:66.23:0,66,1612	0/0:23,0:23:60.19:0,60,1378	0/0:29,0:29:72.23:0,72,1656	0/0:45,0:45:80.63:0,81,1690	0/0:24,0:24:63.20:0,63,1462	1/1:14,9:22:18.06:287,18,0	0/0:34,0:34:33.14:0,33,1483	0/0:20,0:20:23.95:0,24,729	0/0:17,0:17:33.10:0,33,706	0/0:99,0:96:99:0,217,5051	0/0:14,0:14:27.09:0,27,665	0/0:16,0:16:32.94:0,33,695	0/0:50,0:49:62.86:0,63,2608	0/0:22,0:22:42.13:0,42,965	0/0:31,0:31:72.25:0,72,1701	0/0:18,0:18:39.13:0,39,893	0/0:3,0:3:9.03:0,9,210
chr10	93421525	.	A	ATGTGTG	688.79	PASS	AB=0.956;AC=15;AF=0.300;AN=50;BaseQRankSum=1.692;DP=845;FS=11.430;HRun=0;HaplotypeScore=203.0701;InbreedingCoeff=0.0986;MQ=51.06;MQ0=37;MQRankSum=-0.372;QD=1.90;ReadPosRankSum=-6.189;VQSLOD=-0.3493;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:33,12:47:2.93:40,3,0	0/1:5,5:11:3.79:91,0,4	./.	./.	0/1:21,0:21:3.21:3,0,195	0/1:25,0:34:33.80:34,0,71	0/0:22,0:30:3.70:0,4,48	0/1:47,0:44:12.71:13,0,309	0/0:36,0:36:59.98:0,60,1104	0/1:36,0:37:16.85:17,0,532	0/0:17,0:16:8.03:0,8,170	0/0:31,0:32:54.22:0,54,840	0/0:22,0:21:29.60:0,30,515	0/0:27,0:28:35.79:0,36,677	1/1:31,5:38:22.97:580,23,0	0/0:22,0:23:11.71:0,12,438	0/1:19,0:24:3.98:4,0,37	0/0:37,0:37:1.60:0,2,491	0/0:15,0:14:9.33:0,9,130	1/1:13,0:13:2.99:23,3,0	0/0:85,0:85:37.81:0,38,1421	0/1:20,0:20:5.20:5,0,282	0/0:14,0:16:18.06:0,18,335	0/1:43,0:44:6.02:6,0,1027	0/1:20,0:21:17.01:17,0,117	0/0:25,0:28:21.84:0,22,458	0/0:18,0:20:26.69:0,27,390	./.
chr10	93421897	.	T	TCACACA	486.74	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=1.996;DP=538;FS=24.400;HRun=0;HaplotypeScore=139.2043;InbreedingCoeff=0.3832;MQ=71.14;MQ0=16;MQRankSum=-1.976;QD=4.39;ReadPosRankSum=-3.284;VQSLOD=0.0399;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:5.30:0,5,25	1/1:7,0:6:8.82:142,9,0	0/0:28,0:19:2.38:0,2,26	0/0:46,0:23:2.94:0,3,18	0/0:21,0:21:27.09:0,27,474	1/1:16,0:18:3.01:51,3,0	1/1:22,0:20:6.96:127,7,0	0/1:22,0:22:23.02:23,0,359	0/1:17,0:17:26.24:26,0,187	0/0:20,0:20:20.39:0,20,260	0/0:9,0:9:15.05:0,15,251	0/0:14,0:14:1.58:0,2,225	0/0:27,0:27:24.41:0,24,542	0/0:17,0:17:24.03:0,24,386	0/0:15,14:29:2.98:0,3,21	0/0:20,0:20:4.50:0,4,327	1/1:13,0:13:12.04:245,12,0	0/0:14,0:13:18.03:0,18,282	0/0:21,0:21:8.18:0,8,284	0/0:11,0:11:12.51:0,13,206	0/0:19,0:19:21.07:0,21,362	0/0:18,0:16:20.84:0,21,328	0/0:6,0:6:12.04:0,12,201	0/0:29,0:27:35.75:0,36,608	0/1:11,0:11:21.02:21,0,305	0/0:21,0:21:24.41:0,24,371	0/0:21,0:21:16.76:0,17,605	0/0:4,0:4:7.93:0,8,43
chr10	93421909	.	A	ACACACA	387.80	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=1.106;DP=569;FS=19.008;HRun=0;HaplotypeScore=137.4817;InbreedingCoeff=0.5381;MQ=53.57;MQ0=18;MQRankSum=-1.257;QD=4.73;ReadPosRankSum=-3.243;VQSLOD=0.5104;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,12:31:5.44:0,5,25	1/1:7,0:6:8.82:142,9,0	0/0:22,0:13:2.38:0,2,26	0/0:35,0:12:2.94:0,3,18	0/0:26,0:26:27.09:0,27,474	1/1:19,0:18:3.01:51,3,0	1/1:24,0:22:6.96:126,7,0	0/0:31,0:31:26.54:0,27,389	0/1:18,0:18:26.99:27,0,187	0/0:26,0:26:21.03:0,21,297	0/0:10,0:10:15.05:0,15,251	0/0:15,0:15:0.57:0,1,223	0/0:26,0:26:23.13:0,23,541	0/0:18,0:18:23.38:0,23,384	0/0:28,0:28:2.49:0,2,21	0/0:23,0:23:21.07:0,21,346	1/1:14,0:14:9.92:179,10,0	0/0:17,0:14:18.03:0,18,282	0/0:21,0:21:8.18:0,8,284	0/0:10,0:10:12.51:0,13,206	0/0:16,0:16:21.07:0,21,362	0/0:23,0:21:21.05:0,21,328	0/0:11,0:11:12.04:0,12,201	0/0:32,0:30:35.70:0,36,607	0/0:13,0:13:18.06:0,18,326	0/0:27,0:27:24.46:0,24,371	0/0:20,0:20:16.85:0,17,605	0/0:5,0:5:7.93:0,8,43
chr10	93421928	.	C	CAGAGAG	3686.41	PASS	AB=1.000;AC=39;AF=0.750;AN=52;BaseQRankSum=-1.504;DP=556;FS=2.553;HRun=0;HaplotypeScore=129.3646;InbreedingCoeff=0.2028;MQ=45.26;MQ0=20;MQRankSum=-1.606;QD=8.05;ReadPosRankSum=1.373;VQSLOD=2.7640;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,1:29:15.46:248,15,0	0/1:7,0:6:0:0,0,0	./.	./.	1/1:25,0:25:3.01:71,3,0	0/0:18,0:17:5.50:0,5,37	0/1:26,0:22:54.21:69,0,54	1/1:31,0:30:2.97:20,3,0	1/1:17,0:16:15.05:372,15,0	1/1:26,0:26:26.08:428,26,0	0/1:11,0:11:11.69:41,0,12	1/1:18,0:18:15.39:270,15,0	1/1:27,0:27:25.42:470,25,0	1/1:19,0:19:9.91:136,10,0	0/0:27,0:27:11.45:0,11,129	1/1:22,0:22:6.47:93,6,0	0/0:16,0:16:7.76:0,8,121	1/1:10,7:15:1.55:4,2,0	0/1:21,0:20:23.32:96,0,23	1/1:13,0:13:2.97:20,3,0	1/1:18,0:18:12.14:186,12,0	1/1:21,0:19:12.12:122,12,0	0/1:12,0:12:2.57:155,0,3	0/1:29,0:27:21.24:360,0,21	0/1:12,0:12:18.05:42,0,18	1/1:28,0:28:19.81:228,20,0	1/1:20,0:20:13.44:138,13,0	1/1:7,0:7:7.27:118,7,0
chr10	93422626	.	T	TCCCTCCTCTCTCCA	2973.01	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=1.927;DP=604;FS=0.000;HRun=0;HaplotypeScore=214.1061;InbreedingCoeff=0.6764;MQ=67.56;MQ0=1;MQRankSum=-6.546;QD=37.16;ReadPosRankSum=-0.385;VQSLOD=3.0357;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,102,3282	0/0:5,0:5:12.04:0,12,413	0/0:19,0:14:19.59:0,20,520	0/0:24,0:16:26.98:0,27,642	0/0:20,0:20:45.14:0,45,1611	1/1:5,9:20:18.06:1053,18,0	1/1:9,12:28:4.09:1412,4,0	0/0:24,0:24:51:0,51,1216	0/0:19,0:19:45.12:0,45,1537	0/0:23,0:23:57.18:0,57,1889	0/0:14,0:14:30.03:0,30,819	0/0:16,0:16:39.12:0,39,1362	0/0:14,0:14:36.10:0,36,1191	0/0:20,0:20:51.13:0,51,1751	0/0:22,0:22:54.08:0,54,1809	0/0:19,0:19:48.16:0,48,1827	0/1:32,0:31:99:625,0,200	0/0:23,0:23:51.11:0,51,1588	0/0:17,0:17:33.10:0,33,1147	0/0:9,0:9:27.09:0,27,1020	0/0:43,0:43:99:0,105,3528	0/0:14,0:14:36.01:0,36,919	0/0:17,0:17:45.13:0,45,1548	0/0:29,0:29:66.05:0,66,2171	0/0:32,0:32:81.19:0,81,2628	0/0:26,0:26:65.91:0,66,1777	0/0:30,0:29:81.22:0,81,2562	0/0:5,0:5:12.04:0,12,485
chr10	93423558	.	GT	G	13846.83	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.300;DP=594;FS=8.039;HRun=8;HaplotypeScore=65.0480;InbreedingCoeff=0.9906;MQ=74.55;MQ0=1;MQRankSum=-5.986;QD=25.13;ReadPosRankSum=5.472;VQSLOD=5.2101;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:35:93.15:898,93,0	1/1:0,13:13:39.06:376,39,0	0/0:22,0:19:44.12:0,44,470	0/0:21,0:19:30.35:0,30,316	1/1:1,21:22:51.07:492,51,0	1/1:2,14:16:33.05:319,33,0	1/1:1,17:18:45.07:435,45,0	1/1:3,23:26:69.11:666,69,0	1/1:1,23:24:66.10:637,66,0	1/1:1,22:23:66.08:630,66,0	1/1:0,9:9:27.04:261,27,0	1/1:0,18:18:48.08:464,48,0	1/1:1,20:21:60.09:579,60,0	1/1:5,16:21:48.07:464,48,0	1/1:1,23:24:66.11:637,66,0	1/1:0,20:20:60.10:579,60,0	1/1:2,29:31:87.14:840,87,0	1/1:4,30:34:90.14:869,90,0	1/1:1,19:20:60.04:564,60,0	1/1:2,25:27:72.11:695,72,0	1/1:4,15:19:39.06:377,39,0	1/1:2,18:20:54.08:520,54,0	1/1:2,18:20:48.08:464,48,0	1/1:1,12:13:30.05:290,30,0	1/1:3,18:21:45.07:435,45,0	1/1:3,23:26:69.10:661,69,0	1/1:2,21:22:57.09:550,57,0	1/1:2,5:7:15.02:145,15,0
chr10	93423834	.	AC	A	1016.82	PASS	AB=0.958;AC=6;AF=0.107;AN=56;BaseQRankSum=6.686;DP=697;FS=2.801;HRun=7;HaplotypeScore=69.0478;InbreedingCoeff=0.6794;MQ=73.22;MQ0=0;MQRankSum=0.017;QD=14.74;ReadPosRankSum=-1.428;VQSLOD=3.3900;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:55,1:56:99:0,129,1899	0/1:10,1:11:3.51:4,0,275	0/0:24,0:24:52.37:0,52,595	0/1:15,0:13:10.85:11,0,153	0/0:13,0:13:33.11:0,33,415	1/1:1,12:13:36.08:367,36,0	1/1:2,28:30:75.17:765,75,0	0/0:23,0:23:54.13:0,54,651	0/0:26,0:26:78.25:0,78,978	0/0:32,0:32:87.22:0,87,1065	0/0:11,0:11:30.09:0,30,368	0/0:24,0:24:63.19:0,63,779	0/0:26,0:26:75.24:0,75,943	0/0:23,0:23:69.22:0,69,868	0/0:30,0:30:81.25:0,81,1006	0/0:36,0:36:99:0,105,1308	0/0:40,0:40:99:0,114,1434	0/0:20,0:20:60.19:0,60,754	0/0:21,1:22:26.83:0,27,636	0/0:19,0:19:54.14:0,54,642	0/0:33,0:33:84.27:0,84,1056	0/0:26,0:26:78.25:0,78,979	0/0:20,0:20:54.17:0,54,679	0/0:36,0:36:99:0,99,1240	0/0:19,0:19:45.12:0,45,541	0/0:37,0:37:99:0,102,1242	0/0:22,0:22:63.19:0,63,779	0/0:10,0:10:30.10:0,30,376
chr10	93424946	.	T	TG	2036.79	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.638;DP=616;FS=9.178;HRun=0;HaplotypeScore=67.2916;InbreedingCoeff=0.9906;MQ=83.10;MQ0=0;MQRankSum=-3.853;QD=41.57;ReadPosRankSum=1.681;VQSLOD=4.0355;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,1801	0/0:6,0:6:18.06:0,18,251	0/0:14,0:14:36.12:0,36,503	0/0:21,0:21:63.21:0,63,872	0/0:16,0:16:48.12:0,48,649	1/1:0,22:22:60.20:959,60,0	1/1:0,27:27:75.26:1199,75,0	0/0:24,0:24:66.21:0,66,907	0/0:25,0:25:72.24:0,72,1006	0/0:14,0:14:42.13:0,42,573	0/0:9,0:9:27.09:0,27,377	0/0:33,0:33:99:0,99,1377	0/0:23,0:23:66.22:0,66,919	0/0:22,0:22:66.22:0,66,923	0/0:27,0:27:78.26:0,78,1090	0/0:23,0:23:66.22:0,66,922	0/0:45,0:45:99:0,135,1888	0/0:26,0:26:78.26:0,78,1083	0/0:16,0:16:42.14:0,42,587	0/0:18,0:18:51.17:0,51,713	0/0:50,0:50:99:0,138,1925	0/0:23,0:23:63.21:0,63,879	0/0:10,0:10:30.10:0,30,420	0/0:35,0:35:99:0,105,1451	0/0:10,0:10:30.10:0,30,420	0/0:13,0:13:39.13:0,39,545	0/0:15,0:15:45.15:0,45,627	0/0:6,0:6:18.06:0,18,252
chr10	93425356	.	A	AC	5388.45	PASS	AB=0.682;AC=35;AF=0.625;AN=56;BaseQRankSum=-7.797;DP=484;FS=8.309;HRun=8;HaplotypeScore=56.3915;InbreedingCoeff=0.8630;MQ=92.01;MQ0=0;MQRankSum=-3.251;QD=19.38;ReadPosRankSum=0.908;VQSLOD=4.3425;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,3:34:11.87:119,12,0	1/1:4,0:5:3.78:17,4,0	0/0:21,0:21:32.89:0,33,302	0/0:22,0:21:41.97:0,42,376	1/1:0,16:17:45.05:488,45,0	1/1:8,0:9:13.78:62,14,0	1/1:3,0:3:5.44:26,5,0	1/1:6,13:19:11.56:342,12,0	1/1:4,21:25:35.72:661,36,0	1/1:1,9:10:24.07:275,24,0	1/1:0,8:8:12.04:138,12,0	0/0:32,0:32:75.02:0,75,686	0/0:23,0:23:63.01:0,63,570	0/0:12,0:12:36.02:0,36,329	1/1:7,6:15:11.07:76,11,0	0/0:19,0:19:48.02:0,48,439	1/1:7,0:7:8.23:37,8,0	1/1:1,17:18:48.14:554,48,0	0/1:8,7:15:6.41:186,0,6	1/1:1,12:13:33.06:366,33,0	1/1:7,33:40:75.17:847,75,0	0/0:18,0:18:45.02:0,45,411	0/0:14,0:14:39.02:0,39,355	0/0:29,0:28:74.99:0,75,678	0/0:16,0:16:44.06:0,44,389	1/1:1,17:18:26.66:539,27,0	1/1:4,14:18:23.68:517,24,0	1/1:0,4:4:12.04:138,12,0
chr10	93425357	.	C	CCCA	505.54	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=-0.475;DP=485;FS=14.168;HRun=0;HaplotypeScore=93.2382;InbreedingCoeff=0.7431;MQ=91.96;MQ0=0;MQRankSum=-3.868;QD=12.96;ReadPosRankSum=0.359;VQSLOD=1.8489;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:18.98:0,19,156	0/1:5,0:5:0.40:0,0,16	0/0:22,0:22:47.48:0,47,669	0/0:21,0:20:57.08:0,57,805	0/0:17,0:17:22.52:0,23,139	1/1:3,7:10:15.05:323,15,0	1/1:3,0:3:8.70:114,9,0	0/0:19,0:19:34.47:0,34,199	0/0:24,0:25:58.45:0,58,292	0/0:10,0:10:20.57:0,21,84	0/0:8,0:8:10.26:0,10,41	0/0:32,0:32:90.26:0,90,1401	0/0:24,0:24:66.20:0,66,1088	0/0:12,0:12:36.12:0,36,613	0/1:14,0:14:1.95:2,0,50	0/0:19,0:19:57.16:0,57,892	1/1:0,7:7:8.72:195,9,0	0/0:19,0:19:42.85:0,43,180	0/0:14,0:14:26.33:0,26,172	0/0:13,0:13:29.78:0,30,138	0/0:40,0:40:82.43:0,82,425	0/0:19,0:19:51.15:0,51,819	0/0:14,0:14:42.13:0,42,674	0/0:28,0:27:81.25:0,81,1307	0/0:16,0:16:48.07:0,48,758	0/0:18,0:18:44.07:0,44,222	0/0:18,0:18:46.65:0,47,245	0/0:4,0:4:10.71:0,11,45
chr10	93425877	.	GTA	G	488.95	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.031;DP=596;FS=1.165;HRun=0;HaplotypeScore=78.8214;InbreedingCoeff=0.9946;MQ=69.53;MQ0=0;MQRankSum=-5.082;QD=34.93;ReadPosRankSum=1.202;VQSLOD=5.7856;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,2507	0/0:7,0:7:21.06:0,21,392	0/0:25,0:25:74.82:0,75,1310	0/0:25,0:25:56.93:0,57,1231	0/0:33,0:33:99:0,99,1900	0/0:18,0:18:54.19:0,54,1095	0/0:17,0:17:51.18:0,51,1034	0/0:28,0:28:78.25:0,78,1486	0/0:21,0:21:63.22:0,63,1280	0/0:27,0:27:81.27:0,81,1596	0/0:19,0:19:57.20:0,57,1126	0/0:18,0:18:54.19:0,54,1097	0/0:22,0:22:66.19:0,66,1288	0/0:14,0:14:42.14:0,42,833	0/0:28,0:28:84.23:0,84,1584	0/0:12,0:12:36.12:0,36,732	1/1:0,14:14:36.12:584,36,0	0/0:23,0:23:69.24:0,69,1382	0/0:20,0:20:60.18:0,60,1167	0/0:21,0:21:60.21:0,60,1219	0/0:30,0:30:90.31:0,90,1828	0/0:20,0:20:60.21:0,60,1219	0/0:18,0:18:54.19:0,54,1097	0/0:12,0:12:36.12:0,36,718	0/0:17,0:17:51.17:0,51,1022	0/0:31,0:31:93.31:0,93,1827	0/0:23,0:23:66.23:0,66,1339	0/0:9,0:9:27.06:0,27,477
chr10	93425886	.	AG	A	410.40	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.292;DP=603;FS=2.456;HRun=2;HaplotypeScore=69.2910;InbreedingCoeff=0.9981;MQ=66.99;MQ0=0;MQRankSum=-4.742;QD=22.80;ReadPosRankSum=0.271;VQSLOD=3.5358;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,1852	0/0:9,0:9:27.08:0,27,384	0/0:22,0:21:57.18:0,57,792	0/0:23,0:23:58.06:0,58,882	0/0:33,0:33:99:0,99,1450	0/0:17,0:17:51.17:0,51,763	0/0:18,0:18:54.17:0,54,789	0/0:29,0:29:78.26:0,78,1169	0/0:21,0:21:63.21:0,63,938	0/0:27,0:27:81.27:0,81,1213	0/0:18,0:18:54.18:0,54,810	0/0:19,0:19:57.19:0,57,854	0/0:22,0:22:66.21:0,66,967	0/0:12,0:12:36.12:0,36,540	0/0:30,0:30:90.30:0,90,1349	0/0:13,0:13:39.13:0,39,583	1/1:2,16:18:39.13:505,39,0	0/0:22,0:22:63.21:0,63,944	0/0:18,0:18:54.18:0,54,809	0/0:20,0:20:60.20:0,60,899	0/0:31,0:31:90.27:0,90,1307	0/0:20,0:20:54.18:0,54,809	0/0:19,0:19:57.18:0,57,832	0/0:12,0:12:36.10:0,36,519	0/0:21,0:21:63.20:0,63,926	0/0:30,0:30:90.30:0,90,1348	0/0:26,0:26:78.25:0,78,1149	0/0:10,0:10:30.10:0,30,450
chr10	93426144	.	CATGTAAG	C	1117.56	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.235;DP=632;FS=11.365;HRun=0;HaplotypeScore=144.8581;InbreedingCoeff=0.9964;MQ=74.37;MQ0=0;MQRankSum=-6.772;QD=48.59;ReadPosRankSum=0.422;VQSLOD=3.0577;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,4338	0/0:9,0:9:27.09:0,27,990	0/0:10,0:10:27.08:0,27,930	0/0:13,0:14:26.14:0,26,840	0/0:30,0:30:90.31:0,90,3529	0/0:26,0:26:75.26:0,75,2979	0/0:18,0:18:54.19:0,54,2162	0/0:31,0:31:90.30:0,90,3462	0/0:25,0:25:75.26:0,75,3035	0/0:17,0:17:51.18:0,51,2016	0/0:18,0:18:54.19:0,54,2140	0/0:26,0:26:78.27:0,78,3177	0/0:34,0:34:99:0,102,3881	0/0:21,0:21:63.22:0,63,2496	0/0:31,0:31:93.32:0,93,3783	0/0:27,0:27:81.28:0,81,3096	1/1:2,21:23:45.15:1212,45,0	0/0:20,0:20:60.17:0,60,2143	0/0:20,0:20:60.21:0,60,2306	0/0:17,0:17:48.16:0,48,1967	0/0:42,0:42:99:0,126,4900	0/0:18,0:18:54.19:0,54,2156	0/0:13,0:13:39.12:0,39,1440	0/0:27,0:27:81.28:0,81,3131	0/0:19,0:19:57.20:0,57,2223	0/0:27,0:27:81.27:0,81,3141	0/0:21,0:21:63.20:0,63,2370	0/0:11,0:11:33.11:0,33,1342
chr10	93426342	.	TG	T	1355.73	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=10.048;DP=713;FS=2.864;HRun=3;HaplotypeScore=74.0864;InbreedingCoeff=0.9984;MQ=82.69;MQ0=0;MQRankSum=-4.215;QD=32.28;ReadPosRankSum=2.358;VQSLOD=4.1352;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.31:0,96,1364	0/0:9,0:9:27.09:0,27,389	0/0:21,0:21:54.14:0,54,733	0/0:22,0:22:54:0,54,743	0/0:29,0:29:81.27:0,81,1167	0/0:19,0:19:51.17:0,51,734	0/0:17,0:17:42.12:0,42,586	0/0:27,0:27:72.23:0,72,1020	0/0:19,0:19:57.19:0,57,820	0/0:32,0:32:90.30:0,90,1296	0/0:25,0:25:75.25:0,75,1079	0/0:20,0:20:57.18:0,57,802	0/0:31,0:31:87.29:0,87,1250	0/0:25,0:25:75.25:0,75,1080	0/0:35,0:35:99:0,99,1420	0/0:21,0:21:54.18:0,54,778	1/1:2,40:42:99:1451,117,0	0/0:24,0:24:72.20:0,72,1007	0/0:18,0:18:48.16:0,48,689	0/0:41,0:41:99:0,114,1640	0/0:42,0:42:99:0,126,1778	0/0:23,0:23:69.23:0,69,994	0/0:18,0:18:54.18:0,54,775	0/0:18,0:18:31.25:0,31,671	0/0:12,0:12:36.12:0,36,519	0/0:42,0:42:99:0,120,1727	0/0:30,0:29:87.29:0,87,1253	0/0:17,0:17:51.17:0,51,732
chr10	93426508	.	GA	G	730.12	PASS	AB=0.834;AC=13;AF=0.232;AN=56;BaseQRankSum=4.631;DP=673;FS=5.308;HRun=14;HaplotypeScore=80.3991;InbreedingCoeff=0.2457;MQ=69.20;MQ0=7;MQRankSum=-1.406;QD=3.07;ReadPosRankSum=2.515;VQSLOD=0.2943;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:18,11:32:72.39:229,0,72	0/1:3,5:8:10:85,0,10	0/0:56,1:19:13.20:0,13,123	0/1:46,0:19:12.14:12,0,42	0/1:25,4:30:7.57:8,0,442	1/1:4,7:12:1.89:142,2,0	1/1:3,11:15:22.84:150,23,0	0/0:28,1:28:22.24:0,22,412	0/0:17,1:18:20.50:0,20,312	0/1:24,3:27:4.88:5,0,364	0/0:20,2:22:17.93:0,18,417	0/1:18,2:21:12.97:13,0,257	0/0:22,1:23:32.81:0,33,410	0/1:15,3:18:46.48:46,0,171	1/1:12,14:26:31.80:199,32,0	0/0:16,1:19:2.62:0,3,298	0/0:42,2:47:21.40:0,21,785	0/0:24,0:25:56.20:0,56,540	0/0:17,0:19:10.66:0,11,311	0/0:26,0:26:38.08:0,38,454	0/0:17,0:17:30:0,30,269	0/0:20,0:22:53.68:0,54,454	0/0:13,0:13:17.27:0,17,148	0/0:24,3:29:12.34:0,12,463	0/0:16,1:18:17.24:0,17,289	0/0:21,0:22:35.88:0,36,321	0/0:15,1:21:24.69:0,25,344	0/0:4,0:5:12.89:0,13,78
chr10	93426866	.	A	ACACCTG	1339.17	PASS	AB=0.971;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.456;DP=693;FS=13.575;HRun=0;HaplotypeScore=144.1743;InbreedingCoeff=0.6503;MQ=77.99;MQ0=0;MQRankSum=-6.174;QD=21.60;ReadPosRankSum=-0.195;VQSLOD=2.5846;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,105,2204	0/0:11,0:11:33.10:0,33,666	0/0:17,0:17:35.24:0,35,720	0/0:20,0:20:29.41:0,29,496	0/0:31,0:31:90.31:0,90,1924	0/0:24,0:24:45.15:0,45,955	0/0:27,0:27:60.17:0,60,1201	0/0:23,0:23:42.13:0,42,784	0/0:23,0:23:54.19:0,54,1154	0/0:26,0:26:45.15:0,45,926	0/0:29,0:29:66.23:0,66,1411	0/0:19,0:19:48.15:0,48,987	0/0:19,0:19:51.14:0,51,1046	0/0:21,0:21:57.20:0,57,1219	0/0:21,0:21:57.07:0,57,1176	0/0:23,0:23:54.19:0,54,1149	1/1:15,12:28:45.15:1426,45,0	0/1:33,1:34:18.75:19,0,1518	0/0:22,0:22:45.15:0,45,929	0/0:39,0:39:99:0,99,2116	0/0:37,0:37:84.24:0,84,1676	0/0:19,0:19:45.15:0,45,961	0/0:23,0:23:57.16:0,57,1138	0/0:21,0:21:54.17:0,54,1107	0/0:28,0:28:72.25:0,72,1518	0/0:25,0:25:60.20:0,60,1234	0/0:21,0:19:57.20:0,57,1208	0/0:13,0:13:33.11:0,33,689
chr10	93426949	.	GTT	G	8037.89	PASS	AB=0.968;AC=47;AF=0.839;AN=56;BaseQRankSum=-2.549;DP=618;FS=4.288;HRun=14;HaplotypeScore=118.2404;InbreedingCoeff=0.8430;MQ=70.40;MQ0=3;MQRankSum=0.910;QD=15.49;ReadPosRankSum=3.667;VQSLOD=3.9884;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,43:51:99:1122,123,0	1/1:1,4:5:12:111,12,0	0/1:29,1:13:15.20:15,0,86	0/0:24,0:17:14.02:0,14,136	1/1:10,21:34:71.18:618,71,0	0/0:16,1:17:13.70:0,14,367	0/0:27,0:27:69.09:0,69,775	1/1:4,21:26:62.64:551,63,0	1/1:2,12:15:38.77:345,39,0	1/1:8,21:30:65.68:595,66,0	1/1:3,12:15:29.72:262,30,0	1/1:3,0:12:24.62:106,25,0	1/1:5,0:17:32.86:142,33,0	1/1:2,0:22:49.39:213,49,0	1/1:2,17:20:46.29:419,46,0	1/1:6,14:22:46.08:442,46,0	0/0:28,0:30:76.11:0,76,854	1/1:5,13:18:29.89:277,30,0	1/1:10,17:29:29.49:411,29,0	1/1:10,19:29:56.96:527,57,0	1/1:1,12:13:24.02:222,24,0	1/1:1,0:16:38.39:166,38,0	1/1:3,0:22:45.95:200,46,0	1/1:3,0:16:30.17:130,30,0	1/1:6,0:26:57.60:249,58,0	1/1:7,20:29:62.43:551,62,0	1/1:6,10:16:35.69:316,36,0	1/1:0,0:4:10.98:47,11,0
chr10	93427379	.	C	CAGA	18036.97	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.491;DP=408;FS=6.015;HRun=0;HaplotypeScore=53.1465;InbreedingCoeff=0.8890;MQ=71.06;MQ0=1;MQRankSum=-6.098;QD=45.90;ReadPosRankSum=3.770;VQSLOD=6.1081;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:31:63.22:1375,63,0	1/1:0,3:3:9.03:196,9,0	0/0:9,0:9:23.60:0,24,279	0/0:6,0:6:14.98:0,15,194	1/1:0,10:10:19.29:355,19,0	1/1:1,18:19:48.16:1048,48,0	1/1:1,20:21:54.14:1132,54,0	1/1:4,12:17:36.07:624,36,0	1/1:0,13:13:39.13:850,39,0	1/1:4,9:13:27.09:586,27,0	1/1:2,8:10:21.07:458,21,0	1/1:0,16:17:45.15:972,45,0	1/1:0,11:11:33.11:720,33,0	1/1:4,16:21:36.12:781,36,0	1/1:1,10:11:27.09:590,27,0	1/1:1,9:10:24.08:524,24,0	1/1:4,14:18:30.10:656,30,0	1/1:1,30:32:75.26:1639,75,0	1/1:3,10:13:30.10:634,30,0	1/1:0,8:8:21.07:459,21,0	1/1:3,25:30:45.11:898,45,0	1/1:2,6:8:10.28:199,10,0	1/1:2,5:7:9.50:197,10,0	1/1:6,27:33:72.25:1572,72,0	1/1:2,8:11:15.05:328,15,0	1/1:2,6:8:18.06:393,18,0	1/1:1,7:9:15.52:328,16,0	1/1:1,7:8:24.08:522,24,0
chr10	93428226	.	C	CTTGT	746.36	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.632;DP=783;FS=0.000;HRun=0;HaplotypeScore=168.4191;InbreedingCoeff=0.9932;MQ=60.61;MQ0=5;MQRankSum=-4.514;QD=17.36;ReadPosRankSum=-5.134;VQSLOD=2.2770;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,104,1724	0/0:10,0:10:26.76:0,27,434	0/0:41,0:26:71.92:0,72,1238	0/0:42,0:24:37.58:0,38,739	0/0:18,0:18:51.18:0,51,1056	1/1:6,12:19:25.15:355,25,0	1/1:20,2:23:54.78:512,55,0	0/0:37,0:36:99:0,102,2039	0/0:24,0:24:60.08:0,60,1116	0/0:29,0:29:84.25:0,84,1542	0/0:16,0:16:44.50:0,45,765	0/0:24,0:24:40.39:0,40,590	0/0:37,0:37:83.41:0,83,1168	0/0:26,0:26:52.53:0,53,732	0/0:36,0:36:74.10:0,74,1547	0/0:27,0:27:75.21:0,75,1524	0/0:34,0:34:98.90:0,99,1781	0/0:24,0:23:52.17:0,52,1305	0/0:28,0:27:77.50:0,77,1294	0/0:33,0:33:87.28:0,87,1752	0/0:52,0:52:99:0,144,2582	0/0:20,0:20:46.13:0,46,931	0/0:20,0:18:20.46:0,20,282	0/0:23,0:23:20.57:0,21,283	0/0:17,0:16:35.67:0,36,652	0/0:30,0:30:90.29:0,90,1786	0/0:29,0:29:78.65:0,79,1457	0/0:9,0:9:27.05:0,27,466
chr10	93428233	.	T	TTGTGTG	5742.49	PASS	AB=0.881;AC=31;AF=0.554;AN=56;BaseQRankSum=4.359;DP=778;FS=0.000;HRun=0;HaplotypeScore=174.3569;InbreedingCoeff=0.7223;MQ=59.33;MQ0=8;MQRankSum=-4.094;QD=11.79;ReadPosRankSum=-2.377;VQSLOD=3.7664;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,1:50:70.60:923,71,0	1/1:4,0:10:14.90:222,15,0	0/1:45,0:27:15.89:16,0,192	0/1:47,0:25:81.70:90,0,82	0/0:15,0:18:33.11:0,33,640	1/1:18,0:18:20.99:267,21,0	1/1:24,0:24:35.20:303,35,0	1/1:31,0:36:11.16:116,11,0	0/0:23,0:25:33.11:0,33,643	0/0:25,0:28:40.01:0,40,742	0/0:15,0:15:20.86:0,21,424	1/1:12,12:26:18.06:397,18,0	1/1:19,16:39:6.90:1236,7,0	1/1:10,11:25:27.09:759,27,0	1/1:14,0:39:50.36:647,50,0	0/0:25,0:25:30.10:0,30,614	0/1:13,0:29:6.43:43,0,6	0/0:22,0:21:45.11:0,45,866	0/0:23,0:25:24.08:0,24,435	0/0:33,0:33:51.17:0,51,1017	0/0:39,0:41:66.20:0,66,1266	1/1:16,4:20:6.02:108,6,0	1/1:9,12:24:12.03:202,12,0	1/1:10,11:24:11.87:264,12,0	1/1:12,1:19:9.03:110,9,0	0/0:29,0:30:54.17:0,54,1043	0/0:27,0:27:54.18:0,54,1040	1/1:6,0:7:3.01:39,3,0
chr10	93429187	.	TA	T	757.31	PASS	AB=0.904;AC=12;AF=0.214;AN=56;BaseQRankSum=2.608;DP=423;FS=0.581;HRun=13;HaplotypeScore=55.7129;InbreedingCoeff=0.4976;MQ=67.48;MQ0=24;MQRankSum=0.358;QD=5.33;ReadPosRankSum=4.084;VQSLOD=1.5832;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,23:33:45.60:317,46,0	1/1:1,3:4:5.96:44,6,0	0/0:21,0:13:17.06:0,17,112	0/0:20,0:9:16.76:0,17,114	0/0:7,0:8:17.86:0,18,160	0/0:9,0:21:42.69:0,43,219	0/0:4,0:9:11.36:0,11,57	0/0:26,0:25:49.09:0,49,415	0/0:14,0:13:27.04:0,27,263	0/0:15,0:12:24.03:0,24,230	0/1:11,1:11:12.88:13,0,49	0/0:9,0:9:12.02:0,12,117	0/1:9,1:11:7.05:7,0,85	0/0:8,0:8:12.02:0,12,117	1/1:0,4:4:8.95:66,9,0	0/0:12,1:12:2.07:0,2,168	1/1:21,19:38:41.31:437,41,0	0/1:17,3:20:30.19:30,0,194	0/0:10,0:14:38.48:0,38,316	0/0:10,0:11:23.87:0,24,214	0/0:12,0:11:17.98:0,18,162	0/0:3,0:3:6.01:0,6,58	0/0:11,0:11:12.91:0,13,119	0/0:20,0:20:38.90:0,39,364	0/1:8,1:8:3.88:4,0,128	0/0:14,1:15:20.15:0,20,353	0/0:13,0:16:35.79:0,36,321	0/0:9,0:7:11.98:0,12,108
chr10	93429287	.	ACC	A	924.59	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.842;DP=473;FS=12.885;HRun=10;HaplotypeScore=71.5291;InbreedingCoeff=0.8672;MQ=55.88;MQ0=86;MQRankSum=-0.547;QD=7.52;ReadPosRankSum=3.108;VQSLOD=-0.1558;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,4:18:2.68:311,3,0	1/1:2,0:2:5.97:48,6,0	0/0:38,0:12:20.19:0,20,199	0/0:45,1:18:21.40:0,21,223	0/0:11,0:9:17.54:0,18,206	1/1:18,0:16:11.60:35,12,0	1/1:20,0:13:13.69:43,14,0	0/0:24,0:21:35.90:0,36,457	0/0:14,0:10:25.63:0,26,341	0/0:10,0:8:22.29:0,22,263	0/0:9,0:8:15.05:0,15,236	0/0:11,0:10:17.70:0,18,226	0/0:4,0:4:9.03:0,9,109	0/0:6,0:6:12.04:0,12,151	1/1:12,3:12:18.03:176,18,0	0/0:12,0:12:26.94:0,27,333	1/1:33,5:28:50.96:481,51,0	0/0:24,0:19:44.88:0,45,553	0/0:24,0:23:54.77:0,55,661	0/0:10,0:9:14.96:0,15,205	0/0:13,0:10:9.03:0,9,128	0/0:8,0:8:20.85:0,21,228	0/0:8,0:5:9:0,9,85	0/0:9,0:7:16.30:0,16,142	0/0:13,0:10:20.88:0,21,208	0/0:16,0:15:36.11:0,36,492	0/0:10,0:8:18.06:0,18,265	0/0:25,0:19:51.09:0,51,541
chr10	93429295	.	CCCA	C	1522.52	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=1.753;DP=476;FS=8.047;HRun=0;HaplotypeScore=84.0331;InbreedingCoeff=0.7517;MQ=61.75;MQ0=77;MQRankSum=0.186;QD=12.58;ReadPosRankSum=1.810;VQSLOD=2.1088;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,6:18:7.62:433,8,0	1/1:0,1:2:6.01:73,6,0	0/0:53,0:18:34.42:0,34,380	0/0:66,0:25:56.82:0,57,548	0/0:11,0:9:21.03:0,21,264	1/1:18,0:17:21.06:88,21,0	1/1:17,0:11:9.35:63,9,0	0/0:20,0:18:29.78:0,30,609	0/0:13,0:9:25.63:0,26,412	0/0:11,0:8:23.86:0,24,323	0/0:8,0:8:21.05:0,21,397	0/0:9,0:8:23.99:0,24,266	0/0:5,0:5:2.10:0,2,89	0/0:5,0:5:12.04:0,12,156	1/1:6,6:10:17.27:245,17,0	0/0:13,0:13:32.40:0,32,415	1/1:22,9:25:59.36:787,59,0	0/0:22,0:17:45.07:0,45,708	0/0:21,0:20:56.21:0,56,870	0/0:10,0:9:18.05:0,18,273	0/0:9,0:6:11.40:0,11,183	0/0:8,0:7:20.54:0,21,214	0/1:12,0:9:4.29:4,0,68	0/0:10,0:8:3.74:0,4,127	0/0:13,0:11:0.38:0,0,180	0/0:15,0:14:39.11:0,39,599	0/0:8,0:6:18.06:0,18,343	0/0:25,0:19:45.56:0,46,448
chr10	93429296	.	CCAAA	C	636	PASS	AB=0.958;AC=9;AF=0.161;AN=56;BaseQRankSum=1.197;DP=478;FS=3.636;HRun=0;HaplotypeScore=94.6265;InbreedingCoeff=0.4711;MQ=62.98;MQ0=74;MQRankSum=-2.904;QD=6.00;ReadPosRankSum=0.023;VQSLOD=1.8802;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:18:17.83:18,0,147	1/1:2,0:2:2.94:27,3,0	0/0:53,0:18:35.24:0,35,578	0/0:68,0:26:65.46:0,65,813	0/0:10,0:8:20.84:0,21,312	1/1:3,15:17:22.32:377,22,0	1/1:8,7:11:19.72:322,20,0	0/0:19,0:17:47.73:0,48,779	0/0:13,0:9:11.39:0,11,394	0/0:11,0:8:23.35:0,23,260	0/0:11,0:11:30.10:0,30,657	0/0:8,0:8:23.96:0,24,281	0/0:5,0:5:7.80:0,8,94	0/0:5,0:5:11.94:0,12,108	0/0:11,0:10:10.45:0,10,54	0/0:13,0:13:32.94:0,33,462	0/1:32,0:26:32.27:32,0,175	0/0:22,0:17:41.74:0,42,768	0/0:22,0:21:38.27:0,38,945	0/0:9,0:9:21.45:0,21,337	0/0:9,0:6:12.04:0,12,230	0/1:8,0:7:0.15:0,0,123	0/0:12,0:9:0.44:0,0,56	0/0:10,0:8:9.30:0,9,90	0/0:12,0:11:4.22:0,4,156	0/0:15,0:14:38.96:0,39,552	0/0:8,0:6:17.99:0,18,351	0/0:25,0:19:48.74:0,49,389
chr10	93429297	.	CA	C	865.81	PASS	AB=0.963;AC=27;AF=0.482;AN=56;BaseQRankSum=3.725;DP=479;FS=5.807;HRun=15;HaplotypeScore=79.4889;InbreedingCoeff=0.6122;MQ=63.23;MQ0=72;MQRankSum=-2.507;QD=4.08;ReadPosRankSum=2.528;VQSLOD=1.3314;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:18:2.64:113,3,0	1/1:2,0:2:5.34:23,5,0	0/0:55,0:19:34.51:0,35,233	0/0:68,1:27:30.30:0,30,254	0/0:11,0:9:6.30:0,6,52	1/1:18,0:17:17:56,17,0	1/1:16,0:11:12.12:38,12,0	0/0:18,1:17:11.65:0,12,198	0/1:13,0:9:4.20:4,0,83	0/0:11,0:8:5.79:0,6,66	0/0:13,0:13:29.88:0,30,240	1/1:6,2:8:5.24:57,5,0	1/1:4,1:6:8.26:43,8,0	0/0:4,1:5:0:0,0,0	1/1:12,0:10:0.22:55,0,0	0/1:12,0:12:16.69:17,0,62	1/1:34,0:27:42.11:266,42,0	0/0:18,0:16:27.67:0,28,216	0/0:22,0:22:21.71:0,22,283	0/0:7,0:9:11.82:0,12,87	0/0:8,0:6:8.34:0,8,55	0/1:7,1:7:1.14:19,0,1	1/1:7,1:8:0.58:20,1,0	1/1:8,0:8:13.19:63,13,0	1/1:7,3:10:16.25:87,16,0	0/0:15,0:14:11.90:0,12,88	0/0:8,0:6:11.95:0,12,98	1/1:16,6:17:31.77:193,32,0
chr10	93431045	.	AC	A	1944.20	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=3.400;DP=219;FS=40.900;HRun=7;HaplotypeScore=26.8878;InbreedingCoeff=0.7651;MQ=94.45;MQ0=1;MQRankSum=-1.703;QD=19.44;ReadPosRankSum=3.793;VQSLOD=1.1481;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,21:27:45.10:458,45,0	1/1:0,6:6:18.04:183,18,0	0/0:10,0:11:2.81:0,3,128	0/0:17,0:15:5.59:0,6,230	0/0:5,0:5:15.03:0,15,167	1/1:2,17:19:48.11:489,48,0	1/1:5,15:21:31.65:387,32,0	0/0:10,0:9:12.04:0,12,145	0/0:7,0:7:15.04:0,15,176	0/0:8,0:8:18.06:0,18,226	./.	0/0:5,0:5:12.04:0,12,150	0/0:3,0:3:9.03:0,9,112	0/0:3,0:3:9.03:0,9,113	1/1:0,12:12:30.07:306,30,0	0/0:4,0:4:12.04:0,12,150	1/1:2,13:15:23.07:295,23,0	0/0:4,0:4:12.04:0,12,142	0/0:2,0:2:3.01:0,3,38	0/0:9,0:9:27.09:0,27,339	0/0:6,0:6:6.02:0,6,75	0/0:1,0:1:3.01:0,3,37	0/0:1,0:1:3.01:0,3,37	./.	0/0:5,0:5:15.05:0,15,189	0/0:8,0:8:21.07:0,21,264	0/0:6,0:6:15.05:0,15,187	0/0:4,0:4:12.04:0,12,151
chr10	93431835	.	AT	A	3621.79	PASS	AB=0.900;AC=13;AF=0.232;AN=56;BaseQRankSum=10.748;DP=562;FS=1.646;HRun=9;HaplotypeScore=55.6730;InbreedingCoeff=0.9268;MQ=79.68;MQ0=0;MQRankSum=-0.482;QD=22.78;ReadPosRankSum=2.126;VQSLOD=4.5306;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:34:90.04:824,90,0	1/1:1,10:11:30.02:274,30,0	0/0:17,0:18:42.58:0,43,447	0/0:11,0:11:15.03:0,15,158	0/0:26,0:26:78.22:0,78,892	1/1:3,19:22:57.01:516,57,0	1/1:1,19:20:57.03:522,57,0	0/0:27,0:28:53.98:0,54,594	0/0:27,0:27:72.19:0,72,810	0/0:24,0:24:63.18:0,63,719	0/0:13,0:13:36.11:0,36,415	0/0:29,0:29:84.24:0,84,960	0/0:11,0:11:33.10:0,33,379	0/0:11,0:11:32.95:0,33,347	1/1:2,30:32:84.05:769,84,0	0/0:13,0:13:39.12:0,39,450	1/1:4,27:31:78.03:714,78,0	0/0:20,0:20:57.17:0,57,657	0/0:14,0:14:39.11:0,39,441	0/1:8,1:9:3.40:3,0,218	0/0:16,0:16:39.12:0,39,449	0/0:16,0:17:44.97:0,45,499	0/0:16,0:16:39.09:0,39,429	0/0:17,0:17:45.13:0,45,519	0/0:20,0:20:57.16:0,57,649	0/0:31,0:31:84.25:0,84,968	0/0:23,0:23:57.17:0,57,657	0/0:18,0:18:54.13:0,54,610
chr10	93432249	.	A	AT	2611.44	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-5.530;DP=600;FS=8.324;HRun=9;HaplotypeScore=62.7312;InbreedingCoeff=0.8768;MQ=79.71;MQ0=0;MQRankSum=1.245;QD=16.96;ReadPosRankSum=0.766;VQSLOD=3.3067;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,35:37:96.05:1029,96,0	1/1:1,13:14:35.93:398,36,0	0/0:22,0:22:21.75:0,22,209	0/1:16,0:18:5.40:5,0,106	0/0:15,0:15:35.98:0,36,313	1/1:3,1:16:17.04:85,17,0	1/1:2,1:25:28.57:161,29,0	0/0:28,0:28:74.93:0,75,638	0/0:22,0:22:59.99:0,60,521	0/0:21,2:23:23.71:0,24,424	0/0:13,0:13:20.99:0,21,182	0/0:25,0:25:59.94:0,60,514	0/0:20,0:20:53.97:0,54,465	0/0:20,0:20:56.99:0,57,495	1/1:8,20:28:63.12:681,63,0	0/0:18,0:18:44.97:0,45,391	1/1:1,15:16:19.07:439,19,0	0/0:15,0:15:41.99:0,42,365	0/0:25,0:25:56.91:0,57,478	0/0:17,0:18:50.02:0,50,422	0/0:31,0:31:80.63:0,81,684	0/0:15,0:15:32.98:0,33,286	0/0:17,0:17:47.98:0,48,416	0/0:24,2:27:1.54:0,2,448	0/0:19,0:20:56.03:0,56,474	0/0:30,0:30:74.92:0,75,644	0/0:30,0:30:83.96:0,84,725	0/0:12,0:12:35.93:0,36,300
chr10	93432511	.	GC	G	1462.38	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.566;DP=725;FS=4.513;HRun=4;HaplotypeScore=70.6142;InbreedingCoeff=0.9965;MQ=81.31;MQ0=0;MQRankSum=-2.850;QD=31.11;ReadPosRankSum=0.524;VQSLOD=4.1315;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,157,2178	0/0:8,0:8:24.05:0,24,313	0/0:25,0:25:62.83:0,63,830	0/0:23,0:22:59.78:0,60,775	0/0:11,0:11:33.10:0,33,446	1/1:0,20:20:54.17:648,54,0	1/1:1,26:27:78.24:936,78,0	0/0:30,0:30:87.23:0,87,1101	0/0:35,0:35:99:0,105,1469	0/0:30,0:30:84.28:0,84,1176	0/0:18,0:18:54.18:0,54,751	0/0:36,0:36:99:0,108,1508	0/0:29,0:29:84.28:0,84,1173	0/0:36,0:36:99:0,102,1410	0/0:21,0:21:60.19:0,60,824	0/0:13,0:13:36.10:0,36,486	0/0:43,0:43:99:0,129,1803	0/0:49,0:49:99:0,138,1929	0/0:12,0:12:33.10:0,33,443	0/0:18,0:18:51.16:0,51,689	0/0:49,0:49:99:0,141,1954	0/0:26,0:26:78.25:0,78,1072	0/0:14,0:14:39.13:0,39,540	0/0:29,0:29:84.28:0,84,1167	0/0:18,0:18:54.15:0,54,721	0/0:28,0:28:84.27:0,84,1160	0/0:16,0:16:48.16:0,48,669	0/0:7,0:7:20.99:0,21,235
chr10	93433638	.	TTTTTG	T	13751.58	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.730;DP=491;FS=2.623;HRun=0;HaplotypeScore=99.8476;InbreedingCoeff=0.8314;MQ=71.87;MQ0=7;MQRankSum=-0.974;QD=32.59;ReadPosRankSum=2.967;VQSLOD=4.9236;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,7:14:21.07:387,21,0	1/1:3,1:4:3.01:56,3,0	0/0:28,0:18:15.05:0,15,358	0/0:41,0:22:17.10:0,17,263	1/1:5,19:24:39.13:722,39,0	1/1:8,20:28:39.13:727,39,0	1/1:5,8:13:9.03:168,9,0	1/1:13,22:34:63.18:1049,63,0	1/1:3,6:9:9.03:168,9,0	1/1:6,12:17:33.11:615,33,0	1/1:2,20:22:51.13:898,51,0	1/1:5,8:13:24.08:448,24,0	1/1:3,9:12:30.10:559,30,0	1/1:6,7:13:27.09:499,27,0	1/1:7,11:18:45.15:838,45,0	1/1:3,13:16:36.12:671,36,0	1/1:9,8:17:33.08:581,33,0	1/1:2,11:13:27.09:503,27,0	1/1:8,6:13:18.04:303,18,0	1/1:3,13:16:36.08:635,36,0	1/1:1,11:12:21.07:392,21,0	1/1:4,8:11:27.09:503,27,0	1/1:10,8:18:39.10:657,39,0	1/1:7,2:9:15.04:248,15,0	1/1:5,6:10:24.08:447,24,0	1/1:12,11:22:30.10:559,30,0	1/1:1,20:19:45.15:839,45,0	1/1:8,8:16:15.05:280,15,0
chr10	93433672	.	T	TA	3872	PASS	AB=0.967;AC=23;AF=0.411;AN=56;BaseQRankSum=4.718;DP=504;FS=4.343;HRun=8;HaplotypeScore=103.7491;InbreedingCoeff=0.9002;MQ=61.00;MQ0=6;MQRankSum=-7.482;QD=21.63;ReadPosRankSum=1.719;VQSLOD=3.5762;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:14:24.07:277,24,0	1/1:0,2:2:6.02:69,6,0	0/0:23,0:14:12.05:0,12,160	0/1:27,0:9:6.79:7,0,46	0/0:28,0:28:78.02:0,78,705	0/0:28,0:28:54.01:0,54,494	0/0:14,0:14:30:0,30,269	0/0:31,0:30:72.02:0,72,659	0/0:12,0:12:24.01:0,24,219	0/0:17,0:16:45.02:0,45,411	0/0:25,0:25:54.01:0,54,489	1/1:3,10:13:30.09:345,30,0	1/1:1,13:14:36.11:415,36,0	1/1:3,13:16:8.66:338,9,0	1/1:2,21:23:57.17:658,57,0	0/0:21,0:21:50.98:0,51,459	1/1:2,20:23:57:637,57,0	0/0:21,0:21:51.02:0,51,462	0/0:14,0:14:39.01:0,39,351	0/0:18,0:18:48.01:0,48,434	0/0:18,0:18:36.01:0,36,329	1/1:1,11:11:27.08:311,27,0	1/1:0,16:16:39.12:450,39,0	1/1:1,5:6:11.97:122,12,0	1/1:2,8:9:21.06:242,21,0	0/0:18,0:17:48.02:0,48,436	0/0:30,0:27:68.99:0,69,620	0/0:6,0:6:12.01:0,12,110
chr10	93434049	.	T	TG	1110.17	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=6.642;DP=311;FS=6.371;HRun=9;HaplotypeScore=39.2231;InbreedingCoeff=0.8806;MQ=62.40;MQ0=3;MQRankSum=0.952;QD=10.88;ReadPosRankSum=0.587;VQSLOD=1.6450;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:12:16.36:104,16,0	1/1:2,0:2:2.90:16,3,0	0/0:11,0:8:22.99:0,23,178	0/0:6,0:4:11.99:0,12,102	0/0:19,0:19:47.96:0,48,412	0/0:10,0:10:10.07:0,10,38	0/0:6,0:2:3.63:0,4,9	0/0:15,0:14:29.99:0,30,260	0/0:8,0:8:20.98:0,21,178	0/0:11,0:10:20.98:0,21,178	0/0:15,0:15:32.96:0,33,283	1/1:9,0:9:17.39:94,17,0	1/1:11,0:11:17.42:94,17,0	1/1:3,0:3:2.90:16,3,0	1/1:5,0:5:8.68:47,9,0	0/0:17,0:17:41.98:0,42,365	1/1:2,11:12:33.09:365,33,0	0/0:21,0:21:56.95:0,57,489	0/0:14,0:14:35.99:0,36,312	0/0:14,0:14:32.98:0,33,286	0/0:15,0:15:35.98:0,36,312	1/1:4,0:4:8.75:63,9,0	1/1:11,0:11:23.22:127,23,0	1/1:9,0:9:23.33:143,23,0	1/1:17,0:16:34.75:188,35,0	0/0:10,0:10:26.98:0,27,234	0/0:16,0:16:47.99:0,48,416	1/1:0,6:6:6.02:66,6,0
chr10	93434056	.	G	GAAA	264.59	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.939;DP=305;FS=10.585;HRun=0;HaplotypeScore=52.4177;InbreedingCoeff=0.7011;MQ=65.16;MQ0=3;MQRankSum=-2.279;QD=20.35;ReadPosRankSum=1.364;VQSLOD=2.0958;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:23.91:0,24,384	0/0:2,0:2:5.93:0,6,73	0/0:13,0:9:27.09:0,27,451	0/0:7,0:5:15.04:0,15,227	0/0:20,0:20:57.18:0,57,1023	1/1:0,6:7:12.04:247,12,0	1/1:0,6:2:6.02:123,6,0	0/0:17,0:17:48.13:0,48,812	0/0:7,0:7:21.07:0,21,381	0/0:9,0:9:21.07:0,21,377	0/0:17,0:17:42.12:0,42,691	0/0:9,0:9:18.06:0,18,298	0/0:9,0:9:18.06:0,18,310	0/0:4,0:4:3.01:0,3,51	0/0:5,0:5:9.03:0,9,144	0/0:15,0:15:45.11:0,45,801	0/0:11,0:11:33.11:0,33,427	0/0:20,0:20:60.21:0,60,1107	0/0:14,0:14:42.12:0,42,722	0/0:13,0:13:39.12:0,39,696	0/0:14,0:14:39.13:0,39,716	0/0:4,0:4:8.89:0,9,137	0/0:10,0:10:26.96:0,27,376	0/0:10,0:10:27.08:0,27,425	0/0:17,0:16:36.11:0,36,604	0/0:10,0:10:30.10:0,30,541	0/0:16,0:16:48.16:0,48,894	0/0:6,0:6:6.02:0,6,69
chr10	93434058	.	G	GGA	2880.09	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-4.510;DP=302;FS=0.000;HRun=0;HaplotypeScore=35.9951;InbreedingCoeff=0.8873;MQ=65.23;MQ0=3;MQRankSum=-0.194;QD=31.31;ReadPosRankSum=2.072;VQSLOD=5.0030;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,12:13:23.11:397,23,0	1/1:1,1:2:6.01:81,6,0	0/0:13,0:9:26.91:0,27,318	0/0:7,0:5:15.05:0,15,203	0/0:21,0:21:60.09:0,60,768	1/1:4,0:4:5.96:16,6,0	1/1:7,0:3:7.65:32,8,0	0/0:18,0:18:51.09:0,51,604	0/0:7,0:7:21.04:0,21,278	0/0:8,0:8:24.06:0,24,307	0/0:16,0:16:39.01:0,39,492	1/1:0,8:8:18.06:334,18,0	1/1:0,8:9:18.06:335,18,0	1/1:0,3:3:3.01:56,3,0	1/1:0,5:5:9.03:166,9,0	0/0:14,0:14:42.14:0,42,595	0/0:11,0:11:17.10:0,17,42	0/0:20,0:20:60.18:0,60,830	0/0:15,0:15:39.12:0,39,535	0/0:12,0:12:36.10:0,36,494	0/0:14,0:14:36.11:0,36,514	1/1:3,1:4:9.03:130,9,0	1/1:0,8:9:24.08:434,24,0	1/1:3,8:11:27.07:447,27,0	1/1:0,17:16:36.12:666,36,0	0/0:11,0:11:27.08:0,27,385	0/0:17,0:17:48.16:0,48,681	0/0:6,0:6:1.55:0,2,4
chr10	93434150	.	C	CA	1665.64	PASS	AB=0.778;AC=20;AF=0.357;AN=56;BaseQRankSum=-6.855;DP=309;FS=9.264;HRun=10;HaplotypeScore=34.5103;InbreedingCoeff=0.8083;MQ=64.94;MQ0=1;MQRankSum=0.847;QD=19.15;ReadPosRankSum=2.511;VQSLOD=3.5911;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,11:13:8.44:295,8,0	1/1:1,4:6:11.90:111,12,0	0/1:9,0:4:0:0,0,0	0/0:7,0:5:5.24:0,5,21	0/0:13,0:13:26.96:0,27,222	0/0:0,0:11:18.33:0,18,53	0/0:2,0:10:16.29:0,16,47	0/0:31,0:31:71.87:0,72,587	0/0:6,0:7:16.23:0,16,111	0/0:12,0:12:35.94:0,36,292	0/0:19,0:19:50.89:0,51,410	1/1:1,5:6:15.04:160,15,0	1/1:1,11:12:30.05:309,30,0	1/1:0,4:4:12.03:128,12,0	1/1:0,5:5:12.03:128,12,0	0/0:11,0:11:29.95:0,30,246	0/0:16,0:17:43.98:0,44,351	0/0:13,1:14:3.97:0,4,239	0/0:16,0:16:35.94:0,36,296	0/0:14,0:14:41.95:0,42,345	0/0:8,0:9:22.99:0,23,175	1/1:0,3:3:6.02:64,6,0	0/1:1,3:5:9.77:95,0,10	1/1:3,10:12:27.07:288,27,0	1/1:1,10:11:27.07:288,27,0	0/0:13,0:13:35.96:0,36,296	0/0:13,0:13:35.96:0,36,296	0/0:5,0:4:8.97:0,9,74
chr10	93434246	.	GA	G	513.72	PASS	AB=0.844;AC=5;AF=0.089;AN=56;BaseQRankSum=5.069;DP=389;FS=0.000;HRun=10;HaplotypeScore=39.9993;InbreedingCoeff=0.2413;MQ=57.57;MQ0=9;MQRankSum=1.927;QD=9.51;ReadPosRankSum=0.850;VQSLOD=1.3961;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:33:72.62:0,73,777	0/0:2,0:2:3.01:0,3,33	0/0:6,0:2:3:0,3,28	0/0:5,0:4:8.98:0,9,84	0/0:14,0:14:33.52:0,34,353	0/0:14,0:15:32.92:0,33,346	0/0:16,0:12:24.02:0,24,252	0/0:30,0:28:72.14:0,72,775	0/1:8,2:10:22.03:22,0,228	0/0:8,0:8:21.06:0,21,232	0/0:6,0:6:15.04:0,15,166	0/0:9,0:9:18.05:0,18,199	0/0:8,0:9:17.09:0,17,226	0/0:7,0:5:14.87:0,15,147	0/0:10,1:11:4.02:0,4,265	0/0:17,0:17:38.91:0,39,397	1/1:3,24:26:65.99:573,66,0	0/0:17,0:16:42.11:0,42,465	0/0:15,1:15:13:0,13,352	0/0:13,1:13:10.01:0,10,326	0/0:21,0:21:53.94:0,54,597	0/0:6,0:6:12.02:0,12,124	0/0:10,0:9:18.05:0,18,199	0/0:28,1:28:36.26:0,36,807	0/0:19,0:19:16.08:0,16,395	0/1:6,2:8:31.04:31,0,145	0/0:15,0:15:39.05:0,39,411	0/1:8,1:9:5.01:5,0,169
chr10	93437392	.	GCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT	G	4059.66	PASS	AB=0.691;AC=19;AF=0.339;AN=56;BaseQRankSum=6.457;DP=438;FS=13.235;HRun=0;HaplotypeScore=323.7116;InbreedingCoeff=0.4368;MQ=66.58;MQ0=4;MQRankSum=-6.292;QD=26.36;ReadPosRankSum=3.971;VQSLOD=0.8064;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:26:16.88:999,0,17	0/0:7,0:7:9.45:0,9,57	0/0:18,0:17:8.39:0,8,120	0/0:6,0:4:3.01:0,3,143	0/0:19,0:19:39.13:0,39,4047	1/1:5,0:9:6.02:343,6,0	0/0:7,0:7:7.08:0,7,49	0/0:23,0:22:35.99:0,36,1333	0/0:10,0:25:47.19:0,47,5256	0/0:14,0:20:51.18:0,51,4937	0/0:6,0:16:36.12:0,36,4243	1/1:6,6:12:3.01:272,3,0	1/1:11,0:11:18.04:321,18,0	1/1:10,0:10:15.05:333,15,0	0/1:10,0:10:37.24:37,0,138	0/0:18,0:18:42.14:0,42,5302	0/1:6,0:12:16.95:166,0,17	0/0:19,0:19:39.13:0,39,4478	0/0:18,0:17:30.10:0,30,3532	0/0:20,0:20:56.38:0,56,6401	0/0:16,0:16:33.10:0,33,3218	1/1:4,8:12:8.99:564,9,0	1/1:7,8:15:1.86:270,2,0	0/1:3,9:12:46.53:47,0,84	1/1:4,9:12:6.02:544,6,0	0/0:31,0:31:84.26:0,84,9338	0/0:8,0:19:33.94:0,34,2672	0/1:4,0:12:34.92:163,0,35
chr10	93437420	.	T	TA	448.41	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=5.715;DP=354;FS=24.861;HRun=0;HaplotypeScore=61.4049;InbreedingCoeff=0.4275;MQ=54.73;MQ0=8;MQRankSum=-6.432;QD=7.47;ReadPosRankSum=-0.851;VQSLOD=1.5722;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:8.90:0,9,26	0/1:4,0:4:10.14:20,0,10	0/0:3,0:2:6.01:0,6,64	0/0:3,0:2:3.01:0,3,42	0/0:18,0:18:51.16:0,51,694	0/0:4,0:4:4.44:0,4,14	0/1:5,0:5:10.81:15,0,11	0/0:26,0:20:57.12:0,57,744	0/0:22,0:22:49.55:0,50,531	0/0:21,0:20:59.86:0,60,710	0/0:17,0:17:50.69:0,51,539	1/1:6,0:6:2.04:6,2,0	1/1:0,4:4:12.04:188,12,0	1/1:0,6:6:15.05:234,15,0	0/1:8,0:8:8.08:8,0,21	0/0:19,0:19:57.19:0,57,796	0/0:6,0:6:2.22:0,2,7	0/0:17,0:17:51.15:0,51,680	0/0:13,0:11:33.11:0,33,458	0/0:22,0:22:63:0,63,846	0/0:13,0:13:39.11:0,39,526	1/1:8,0:8:5.23:44,5,0	0/0:8,0:8:2.22:0,2,7	0/1:10,0:10:27.59:28,0,36	1/1:9,0:9:6.02:64,6,0	0/0:32,0:32:96.31:0,96,1319	0/0:25,0:24:46.66:0,47,576	0/0:8,0:8:2.22:0,2,7
chr10	93437424	.	T	TA	559.11	PASS	AB=1.000;AC=13;AF=0.260;AN=50;BaseQRankSum=7.191;DP=356;FS=0.000;HRun=0;HaplotypeScore=75.1432;InbreedingCoeff=0.6838;MQ=52.63;MQ0=8;MQRankSum=-6.943;QD=8.47;ReadPosRankSum=-1.484;VQSLOD=3.2461;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:8.08:145,8,0	1/1:1,3:4:11.78:148,12,0	./.	0/0:3,0:1:3.01:0,3,42	0/0:16,0:16:45.15:0,45,628	1/1:8,0:8:7.34:52,7,0	1/1:2,3:5:11.04:121,11,0	0/0:29,0:23:63.12:0,63,796	0/0:21,0:21:46.53:0,47,505	0/0:21,0:20:59.86:0,60,709	0/0:17,0:17:50.69:0,51,539	0/0:6,0:6:2.22:0,2,7	./.	./.	1/1:3,6:9:16.45:203,16,0	0/0:19,0:19:57.19:0,57,794	1/1:10,0:10:1.48:41,1,0	0/0:17,0:17:48.22:0,48,617	0/0:13,0:11:30.06:0,30,381	0/0:21,0:21:62.02:0,62,842	0/0:15,0:15:42.10:0,42,550	0/0:8,0:8:2.21:0,2,7	0/0:8,0:8:2.22:0,2,7	0/0:10,0:10:2.88:0,3,35	0/0:9,0:9:1.36:0,1,3	0/0:31,0:31:93.31:0,93,1300	0/0:23,0:22:47.31:0,47,554	0/1:9,0:9:2.59:3,0,3
chr10	93437819	.	T	TTTTA	1156.64	PASS	AC=16;AF=0.444;AN=36;BaseQRankSum=-5.564;DP=282;FS=1.171;HRun=0;HaplotypeScore=51.4778;InbreedingCoeff=0.6058;MQ=57.41;MQ0=2;MQRankSum=2.691;QD=13.94;ReadPosRankSum=-0.475;VQSLOD=2.9714;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:15:6.01:0,6,56	./.	./.	./.	0/0:9,0:9:6.01:0,6,71	0/0:7,0:7:3.01:0,3,45	./.	./.	1/1:4,4:8:6.02:138,6,0	./.	1/1:3,2:5:3.01:69,3,0	0/0:11,0:10:2.84:0,3,28	0/0:5,0:5:6.01:0,6,56	./.	0/0:6,0:10:6.01:0,6,56	1/1:6,1:8:3.01:69,3,0	0/0:5,0:15:15.02:0,15,140	1/1:14,9:23:15.05:346,15,0	1/1:8,2:9:9.02:163,9,0	./.	1/1:2,2:4:3.01:69,3,0	./.	0/0:6,0:6:3:0,3,28	./.	0/0:16,0:16:9.01:0,9,84	1/1:9,4:13:12.03:233,12,0	1/1:7,3:11:9.03:208,9,0	0/0:16,0:16:12.01:0,12,111
chr10	93437838	.	TATTTATTTATTTATTTATTTATTTATTTA	T	1567.04	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=5.140;DP=213;FS=3.804;HRun=0;HaplotypeScore=130.8042;InbreedingCoeff=0.7122;MQ=56.22;MQ0=5;MQRankSum=-3.075;QD=47.49;ReadPosRankSum=0.764;VQSLOD=2.7017;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:36.08:0,36,2008	0/0:1,0:1:3:0,3,25	0/1:1,0:1:0:0,0,0	./.	0/0:6,0:6:12.04:0,12,919	0/0:10,0:10:27.02:0,27,2304	0/0:4,0:4:12.04:0,12,969	0/0:40,0:37:99:0,108,6340	0/0:8,0:8:18.06:0,18,1677	0/0:2,0:2:6.01:0,6,306	0/0:3,0:3:9.03:0,9,916	1/1:11,0:10:3.01:182,3,0	1/1:2,0:4:12:482,12,0	1/1:1,0:1:3.01:53,3,0	0/0:6,0:6:15.05:0,15,1282	0/0:6,0:6:12.04:0,12,991	0/0:12,0:12:21.07:0,21,2057	0/0:21,0:21:48.16:0,48,4450	0/0:12,0:8:24.08:0,24,1696	0/0:4,0:4:12.04:0,12,821	0/0:3,0:3:6.02:0,6,438	1/1:2,0:2:1.25:3,1,0	1/1:1,0:2:5.93:234,6,0	1/1:2,0:3:6.01:66,6,0	1/1:2,6:9:12.04:700,12,0	0/0:9,0:9:27.08:0,27,2426	0/0:10,0:10:24.08:0,24,2061	0/0:10,0:10:27.09:0,27,2161
chr10	93437841	.	TTATTTATTTATTTATTTATTTATTTATTTA	T	1711.71	PASS	AB=1.000;AC=14;AF=0.269;AN=52;BaseQRankSum=5.053;DP=206;FS=5.573;HRun=0;HaplotypeScore=136.1952;InbreedingCoeff=0.7185;MQ=56.44;MQ0=6;MQRankSum=-3.087;QD=57.06;ReadPosRankSum=0.409;VQSLOD=2.5799;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:30.06:0,30,1935	./.	0/1:1,0:1:0:0,0,0	./.	0/0:5,0:5:9.03:0,9,880	0/0:10,0:10:24.07:0,24,2299	0/0:4,0:4:12.02:0,12,959	0/0:38,0:35:96.30:0,96,6328	0/0:9,0:9:21.07:0,21,1839	0/0:1,0:1:3.01:0,3,282	0/0:3,0:3:9.03:0,9,931	1/1:0,10:9:3.01:241,3,0	1/1:4,0:4:12:523,12,0	1/1:1,0:1:3.01:53,3,0	0/0:6,0:6:15.04:0,15,1274	0/0:6,0:6:12.03:0,12,976	0/0:14,0:14:27.09:0,27,2363	0/0:21,0:21:48.16:0,48,4502	0/0:13,0:8:24.06:0,24,1696	0/0:4,0:4:12.04:0,12,827	0/0:3,0:3:6:0,6,422	0/1:1,0:1:0:0,0,0	1/1:2,0:2:5.98:258,6,0	1/1:2,0:2:6.01:65,6,0	1/1:9,0:9:12.04:721,12,0	0/0:8,0:8:24.07:0,24,2395	0/0:10,0:10:24.07:0,24,2074	0/0:10,0:10:27.09:0,27,2055
chr10	93437842	.	TATTTATTTATTTATTTATTTATTTATTTA	T	1603.32	PASS	AB=1.000;AC=13;AF=0.260;AN=50;BaseQRankSum=5.081;DP=205;FS=3.958;HRun=0;HaplotypeScore=137.3075;InbreedingCoeff=0.7359;MQ=56.52;MQ0=6;MQRankSum=-3.417;QD=55.29;ReadPosRankSum=0.437;VQSLOD=2.2727;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:30.06:0,30,1863	./.	0/1:1,0:1:0:0,0,0	./.	0/0:4,0:4:9.03:0,9,840	0/0:10,0:10:24.07:0,24,2227	0/0:4,0:4:12.02:0,12,930	0/0:37,0:34:99:0,99,6149	0/0:9,0:9:21.07:0,21,1767	0/0:1,0:1:3.01:0,3,273	0/0:3,0:3:9.03:0,9,898	1/1:10,0:9:3.01:215,3,0	1/1:2,2:4:12:483,12,0	1/1:1,0:1:3.01:53,3,0	0/0:6,0:6:15.04:0,15,1234	0/0:6,0:6:12.03:0,12,949	0/0:15,0:15:30.10:0,30,2355	0/0:22,0:22:51.17:0,51,4426	0/0:13,0:8:24.06:0,24,1630	0/0:4,0:4:12.04:0,12,791	0/0:3,0:3:6:0,6,411	./.	1/1:1,1:2:5.98:237,6,0	1/1:1,1:2:6.01:65,6,0	1/1:8,1:9:12.04:699,12,0	0/0:8,0:8:24.07:0,24,2319	0/0:10,0:10:24.07:0,24,2001	0/0:10,0:10:27.09:0,27,1935
chr10	93437866	.	TA	T	338.75	PASS	AB=0.667;AC=15;AF=0.278;AN=54;BaseQRankSum=6.787;DP=236;FS=3.827;HRun=1;HaplotypeScore=37.9728;InbreedingCoeff=0.7222;MQ=58.34;MQ0=8;MQRankSum=-5.523;QD=6.27;ReadPosRankSum=2.356;VQSLOD=0.8856;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:22.76:0,23,275	0/0:2,0:2:5.96:0,6,43	./.	0/0:2,0:1:2.04:0,2,6	0/0:4,0:4:6.91:0,7,90	0/0:7,0:7:18.05:0,18,246	0/0:5,0:5:15.03:0,15,192	0/0:31,0:28:84.17:0,84,1048	0/0:11,0:11:27.02:0,27,294	0/0:5,0:5:14.25:0,14,161	0/0:7,0:7:21.06:0,21,281	1/1:11,0:9:2.22:7,2,0	1/1:3,2:5:11.07:66,11,0	1/1:2,4:6:17.73:118,18,0	0/0:9,0:9:19.71:0,20,180	0/0:5,0:5:12.03:0,12,155	0/0:22,0:22:40.52:0,41,494	0/0:22,0:22:54.10:0,54,656	0/0:13,0:10:30.08:0,30,382	0/0:4,0:4:12.04:0,12,171	0/0:5,0:5:12.03:0,12,154	1/1:1,1:1:2.98:21,3,0	1/1:2,3:5:14.39:91,14,0	1/1:2,3:4:5.80:34,6,0	1/1:8,4:12:19.48:112,19,0	0/0:7,0:7:21.05:0,21,256	0/0:9,0:9:24.06:0,24,295	0/1:4,4:8:54.34:62,0,54
chr10	93437868	.	TTTA	T	413.62	PASS	AB=0.943;AC=19;AF=0.339;AN=56;BaseQRankSum=7.864;DP=246;FS=4.534;HRun=0;HaplotypeScore=46.9106;InbreedingCoeff=0.4512;MQ=58.27;MQ0=8;MQRankSum=-4.036;QD=4.06;ReadPosRankSum=3.890;VQSLOD=0.6934;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:9:9.62:10,0,150	0/0:2,0:2:6.01:0,6,58	0/0:3,0:2:6.01:0,6,57	0/0:2,0:1:2.94:0,3,18	0/1:4,0:4:7.64:8,0,85	0/0:7,0:7:15.04:0,15,251	0/0:5,0:5:12.02:0,12,116	0/0:31,0:29:77.78:0,78,693	0/0:11,0:11:27.05:0,27,298	0/0:7,0:7:21.03:0,21,202	0/0:7,0:7:20.96:0,21,208	1/1:11,0:9:2.99:23,3,0	1/1:5,0:5:7.38:53,7,0	1/1:6,0:6:15.95:106,16,0	0/1:9,0:9:29.58:30,0,121	0/0:6,0:6:12.02:0,12,135	0/1:23,0:23:30.10:30,0,323	0/0:22,0:22:48.07:0,48,547	0/0:13,0:10:30.06:0,30,364	0/0:4,0:4:12.01:0,12,111	0/0:6,0:6:12.02:0,12,135	1/1:3,0:2:3.62:11,4,0	1/1:5,0:5:11.99:77,12,0	1/1:5,0:4:6.79:44,7,0	1/1:12,0:12:19.01:110,19,0	0/0:8,0:8:24.05:0,24,295	0/0:9,0:9:24.05:0,24,288	0/1:6,4:10:38.22:94,0,38
chr10	93437870	.	TA	T	444.71	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=6.812;DP=254;FS=0.647;HRun=1;HaplotypeScore=39.9145;InbreedingCoeff=0.7315;MQ=58.22;MQ0=7;MQRankSum=-4.494;QD=6.54;ReadPosRankSum=3.108;VQSLOD=0.7458;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:15.12:0,15,230	0/0:3,0:3:9:0,9,93	0/0:4,0:2:5.98:0,6,45	0/0:2,0:1:2.04:0,2,6	0/0:5,0:5:6.17:0,6,98	0/0:6,0:6:15.05:0,15,197	0/0:5,0:5:15.03:0,15,166	0/0:33,0:31:76.78:0,77,845	0/0:11,0:11:27.05:0,27,299	0/0:7,0:7:21.05:0,21,232	0/0:7,0:7:20.96:0,21,220	1/1:11,0:9:2.60:10,3,0	1/1:4,2:6:14.88:106,15,0	1/1:2,4:6:17.76:122,18,0	0/1:10,0:10:4.85:5,0,168	0/0:6,0:6:15.02:0,15,156	0/0:23,0:23:24.28:0,24,441	0/0:22,0:22:48.04:0,48,492	0/0:14,0:12:36.07:0,36,400	0/0:6,0:6:18.01:0,18,179	0/0:6,0:6:12.02:0,12,132	1/1:2,1:2:5.01:27,5,0	1/1:2,3:5:14.87:105,15,0	1/1:2,3:4:8.82:57,9,0	1/1:8,4:12:20.37:129,20,0	0/0:8,0:8:24:0,24,230	0/0:9,0:9:24.04:0,24,252	0/1:10,0:10:0.76:62,0,1
chr10	93440172	.	GATGGATGA	G	2154.64	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.995;DP=836;FS=4.078;HRun=0;HaplotypeScore=216.3214;InbreedingCoeff=0.9979;MQ=59.32;MQ0=11;MQRankSum=-7.543;QD=21.76;ReadPosRankSum=-3.561;VQSLOD=2.7358;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,41:47:36.07:915,36,0	1/1:3,16:19:20.79:508,21,0	0/0:25,0:18:34.02:0,34,377	0/0:27,0:18:35.12:0,35,395	0/0:27,0:27:52.18:0,52,962	0/0:17,0:17:51.11:0,51,1509	0/0:29,0:29:71.97:0,72,1471	0/0:32,0:30:62.24:0,62,731	0/0:32,0:32:84.08:0,84,1559	0/0:36,0:35:63.09:0,63,1108	0/0:18,0:18:38.91:0,39,502	0/0:33,0:33:59.98:0,60,1022	0/0:28,0:28:51.05:0,51,989	0/0:37,0:37:68.96:0,69,919	1/1:3,30:33:33.11:875,33,0	0/0:25,0:25:39.05:0,39,645	0/0:33,0:33:53.49:0,53,945	0/0:19,0:19:33.05:0,33,560	0/0:17,0:15:38.76:0,39,464	0/0:33,0:33:68.35:0,68,1085	0/0:74,0:73:99:0,176,2813	0/0:27,0:27:34.01:0,34,469	0/0:36,0:36:71.38:0,71,780	0/0:25,0:25:54.96:0,55,712	0/0:26,0:26:41.91:0,42,693	0/0:32,0:32:78.10:0,78,1326	0/0:29,0:29:55.87:0,56,883	0/0:20,0:20:39.02:0,39,830
chr10	93440180	.	A	AATGGATGG	9364.29	PASS	AC=42;AF=0.778;AN=54;BaseQRankSum=-5.747;DP=846;FS=2.154;HRun=0;HaplotypeScore=197.1040;InbreedingCoeff=0.8149;MQ=57.91;MQ0=16;MQRankSum=-2.487;QD=14.08;ReadPosRankSum=0.536;VQSLOD=4.1444;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:14.98:0,15,180	0/0:16,0:16:17.21:0,17,171	0/0:24,0:17:0:0,0,0	./.	1/1:11,15:29:24.04:780,24,0	0/0:18,0:18:33.09:0,33,672	0/0:24,0:24:30.08:0,30,556	1/1:35,0:33:19.85:120,20,0	1/1:28,0:28:26.76:259,27,0	1/1:19,12:31:24.04:658,24,0	1/1:10,9:22:6.02:244,6,0	1/1:16,17:33:12.04:488,12,0	1/1:13,15:31:15.04:513,15,0	1/1:20,19:43:9.03:367,9,0	0/0:33,0:33:32.40:0,32,298	1/1:10,14:25:9.03:367,9,0	1/1:14,20:35:18.02:616,18,0	1/1:11,7:19:3.01:122,3,0	1/1:15,4:18:17.97:305,18,0	1/1:18,17:37:29.90:677,30,0	1/1:71,0:69:51.05:1003,51,0	1/1:10,15:29:9.03:281,9,0	1/1:35,0:35:8.92:66,9,0	1/1:17,11:29:12.93:490,13,0	1/1:11,10:25:9.01:268,9,0	1/1:21,9:31:30:737,30,0	1/1:15,14:30:12.04:489,12,0	1/1:10,11:22:15.03:514,15,0
chr10	93442617	.	GACAGACAGACAT	G	5956.51	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.960;DP=767;FS=45.224;HRun=0;HaplotypeScore=250.6049;InbreedingCoeff=0.9936;MQ=74.08;MQ0=1;MQRankSum=-11.823;QD=46.17;ReadPosRankSum=1.285;VQSLOD=2.7895;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,108,5488	0/0:7,0:7:15.05:0,15,887	0/0:33,0:32:69.22:0,69,2551	0/0:39,0:34:72.20:0,72,2030	0/0:24,0:24:54.17:0,54,2921	0/0:28,0:28:69.24:0,69,3769	0/0:39,0:39:99:0,105,5026	0/0:43,0:43:99:0,105,4485	0/0:31,0:31:72.22:0,72,3680	0/0:30,0:30:75.24:0,75,3588	0/0:26,0:26:75.21:0,75,3751	1/1:4,15:19:24.08:795,24,0	1/1:6,13:19:21.07:754,21,0	1/1:2,11:13:21.07:751,21,0	0/0:35,0:35:99:0,99,4505	0/0:24,0:24:60.19:0,60,2685	0/0:25,0:25:66.16:0,66,3303	0/0:27,0:27:66.23:0,66,3361	0/0:20,0:20:48.15:0,48,1991	0/0:22,0:22:60.21:0,60,3155	0/0:56,0:56:99:0,159,6974	1/1:2,14:16:33.11:1181,33,0	1/1:3,13:16:20.60:576,21,0	1/1:1,25:26:21.07:678,21,0	1/1:4,16:20:36.12:1221,36,0	0/0:41,0:41:99:0,102,5504	0/0:21,0:20:42.14:0,42,2319	0/0:22,0:22:63.22:0,63,3629
chr10	93442772	.	CGAAAAAAAAAGAAAA	C	2833.11	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.604;DP=543;FS=5.765;HRun=0;HaplotypeScore=202.6383;InbreedingCoeff=0.8286;MQ=54.17;MQ0=18;MQRankSum=-7.196;QD=38.81;ReadPosRankSum=3.679;VQSLOD=2.7555;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:69.24:0,69,4600	0/0:10,0:10:18.06:0,18,1147	0/0:27,0:8:11.90:0,12,225	0/0:41,0:11:12.04:0,12,437	0/0:30,0:30:57.19:0,57,3513	0/0:22,0:22:54.19:0,54,3500	0/0:10,0:10:1.20:0,1,1197	0/0:23,0:23:42.12:0,42,2038	0/0:19,0:19:36.10:0,36,1693	0/0:26,0:26:45.62:0,46,2746	0/0:23,0:23:45.15:0,45,3038	1/1:6,3:8:6.01:243,6,0	1/1:5,4:9:9.03:365,9,0	1/1:6,2:8:3.01:122,3,0	0/0:22,0:22:33.11:0,33,2221	0/0:14,0:14:27.07:0,27,1469	0/0:26,0:25:63.21:0,63,4066	0/0:22,0:22:39.13:0,39,2313	0/0:20,0:17:33.11:0,33,1689	0/0:17,0:18:43.35:0,43,2590	0/0:12,0:12:21.07:0,21,1328	1/1:10,4:14:9.02:365,9,0	1/1:8,10:18:30.09:1181,30,0	1/1:4,2:6:3.01:121,3,0	1/1:1,8:9:15.05:608,15,0	0/0:34,0:34:60.20:0,60,4024	0/0:19,0:18:12.04:0,12,672	0/0:24,0:23:51.18:0,51,3610
chr10	93443322	.	AAG	A	2861.67	PASS	AB=0.889;AC=29;AF=0.537;AN=54;BaseQRankSum=-0.372;DP=476;FS=5.859;HRun=0;HaplotypeScore=78.7426;InbreedingCoeff=0.6944;MQ=62.22;MQ0=12;MQRankSum=1.802;QD=10.26;ReadPosRankSum=3.107;VQSLOD=2.3874;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:26:18:0,18,157	0/0:7,0:6:5.96:0,6,46	./.	0/0:23,0:8:2.88:0,3,42	1/1:3,2:5:6.02:68,6,0	0/0:20,1:21:8.17:0,8,500	0/0:18,0:18:36.10:0,36,517	1/1:23,8:30:20.99:199,21,0	1/1:10,12:21:26.50:285,27,0	1/1:8,8:14:21.06:237,21,0	0/1:4,4:8:0.93:59,0,1	0/0:11,0:22:11.97:0,12,98	0/1:10,0:10:1.51:2,0,100	0/0:7,0:15:20.94:0,21,170	0/0:8,0:17:11.91:0,12,105	1/1:6,11:17:26.91:285,27,0	1/1:11,0:20:14.20:70,14,0	1/1:7,11:17:33.06:360,33,0	1/1:11,5:14:11.61:102,12,0	1/1:9,4:13:11.82:115,12,0	1/1:7,20:27:35.84:407,36,0	0/0:1,0:5:3:0,3,28	0/0:5,0:7:2.48:0,2,9	0/0:17,0:18:2.99:0,3,24	0/1:19,0:17:2.72:3,0,96	1/1:3,14:15:42.12:474,42,0	1/1:14,13:26:25.09:332,25,0	1/1:2,0:12:11.36:56,11,0
chr10	93443757	.	G	GAA	6633.48	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.997;DP=725;FS=16.207;HRun=1;HaplotypeScore=105.2305;InbreedingCoeff=0.9955;MQ=86.36;MQ0=0;MQRankSum=-1.356;QD=49.50;ReadPosRankSum=4.070;VQSLOD=3.6224;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1974	0/0:16,0:16:45.15:0,45,731	0/0:23,0:23:69.13:0,69,1078	0/0:28,0:28:69.01:0,69,1062	0/0:26,0:26:66.23:0,66,1076	0/0:20,0:20:60.20:0,60,978	0/0:50,0:50:99:0,150,2369	0/0:29,0:29:87.28:0,87,1376	0/0:27,0:27:78.27:0,78,1272	0/0:21,0:21:60.18:0,60,931	0/0:13,0:13:39.13:0,39,636	1/1:0,26:26:78.22:1536,78,0	1/1:0,19:20:54.10:999,54,0	1/1:0,28:29:72.20:1419,72,0	0/0:34,0:34:96.33:0,96,1566	0/0:23,0:23:66.21:0,66,1050	0/0:43,0:43:99:0,129,2104	0/0:33,0:33:99:0,99,1584	0/0:24,0:24:69.24:0,69,1112	0/0:16,0:16:48.16:0,48,781	0/0:66,0:66:99:0,199,3229	1/1:0,7:7:21.07:426,21,0	1/1:1,7:8:21.01:386,21,0	1/1:0,35:36:81.75:1645,82,0	1/1:0,6:8:14.97:223,15,0	0/0:29,0:29:87.25:0,87,1315	0/0:16,0:16:48.16:0,48,779	0/0:13,0:13:33.11:0,33,538
chr10	93443987	.	G	GT	750.02	PASS	AB=0.955;AC=21;AF=0.438;AN=48;BaseQRankSum=2.720;DP=445;FS=5.460;HRun=15;HaplotypeScore=70.8610;InbreedingCoeff=0.3459;MQ=60.69;MQ0=2;MQRankSum=-1.848;QD=3.22;ReadPosRankSum=-0.325;VQSLOD=0.1236;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:36:25.60:0,26,206	0/0:12,1:15:14.89:0,15,81	1/1:17,0:12:2.92:17,3,0	0/1:14,0:9:11.19:11,0,32	1/1:13,13:28:2.13:238,2,0	1/1:11,1:16:16.95:96,17,0	1/1:12,1:14:0.84:76,1,0	0/1:24,1:25:1.51:2,0,177	0/0:19,0:21:35.62:0,36,208	0/0:17,0:21:35.98:0,36,212	0/1:13,3:18:10.42:10,0,151	./.	0/1:5,0:4:0:0,0,0	./.	0/1:16,2:20:22.24:22,0,92	0/0:20,0:20:1.79:0,2,175	1/1:22,7:27:32.75:363,33,0	0/0:22,1:24:1.78:0,2,191	0/0:18,0:18:29.29:0,29,179	0/0:15,0:16:10.29:0,10,71	0/1:18,1:21:0.72:1,0,99	./.	./.	0/1:6,0:6:0:0,0,0	1/1:11,0:11:1.49:5,1,0	0/0:17,1:19:5.73:0,6,132	0/0:16,0:17:25.14:0,25,146	1/1:4,3:7:5.99:50,6,0
chr10	93444007	.	CT	C	1571.07	PASS	AB=1.000;AC=15;AF=0.341;AN=44;BaseQRankSum=3.243;DP=393;FS=1.127;HRun=8;HaplotypeScore=63.7945;InbreedingCoeff=0.8731;MQ=47.64;MQ0=7;MQRankSum=-2.058;QD=12.09;ReadPosRankSum=2.861;VQSLOD=2.7355;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,22:31:42.04:405,42,0	1/1:1,8:9:24.04:231,24,0	0/1:6,0:1:0:0,0,0	0/0:6,0:3:0:0,0,0	0/0:24,0:24:47.29:0,47,512	1/1:4,11:15:23.69:229,24,0	1/1:4,11:15:30.02:289,30,0	0/0:24,0:22:48.14:0,48,570	0/0:20,1:21:10.07:0,10,334	0/0:27,0:27:61.20:0,61,686	0/0:22,0:21:57.46:0,57,628	./.	./.	./.	1/1:8,12:19:20.85:201,21,0	0/0:18,0:18:45.07:0,45,480	1/1:19,8:24:35.19:335,35,0	0/0:26,0:25:60.95:0,61,640	0/0:19,0:17:42.11:0,42,492	0/0:13,0:13:36.08:0,36,419	0/0:20,0:19:40.30:0,40,443	./.	./.	./.	0/0:2,0:2:0:0,0,0	0/0:21,0:21:48.61:0,49,570	0/0:19,0:19:51.11:0,51,574	1/1:3,3:6:5.97:49,6,0
chr10	93444492	.	GA	G	429.60	PASS	AB=0.805;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.084;DP=464;FS=0.000;HRun=15;HaplotypeScore=84.6235;InbreedingCoeff=0.2469;MQ=52.96;MQ0=10;MQRankSum=4.092;QD=4.34;ReadPosRankSum=4.741;VQSLOD=1.3294;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,15:33:4.59:196,0,5	1/1:2,6:8:14.76:96,15,0	0/0:6,0:3:8.99:0,9,76	0/1:8,0:6:7.34:7,0,45	0/0:15,1:16:4:0,4,120	0/0:11,1:14:6.71:0,7,192	0/0:20,2:23:8.38:0,8,167	0/0:6,1:9:1.63:0,2,125	0/0:16,0:16:35.97:0,36,307	0/0:16,1:21:15.63:0,16,261	0/0:4,0:5:5.84:0,6,40	0/0:15,0:15:34.76:0,35,204	0/0:22,0:22:45.91:0,46,259	0/0:16,0:15:25.26:0,25,134	0/1:6,16:24:1.39:229,0,1	0/0:12,0:13:23.12:0,23,224	0/0:16,0:34:41.40:0,41,239	0/0:18,3:23:9.17:0,9,300	0/0:23,0:20:20.35:0,20,280	0/1:13,2:15:20.56:21,0,79	0/0:16,0:16:23.16:0,23,232	0/0:20,0:24:37.77:0,38,215	0/0:11,0:11:24.73:0,25,149	0/0:14,0:15:18.21:0,18,107	0/0:11,0:11:15.94:0,16,94	0/0:16,1:17:10.67:0,11,202	0/0:9,0:9:11.98:0,12,101	0/1:8,1:8:6.81:7,0,64
chr10	93445400	.	TG	T	1613.46	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.680;DP=472;FS=9.234;HRun=2;HaplotypeScore=53.6856;InbreedingCoeff=0.9353;MQ=78.10;MQ0=1;MQRankSum=-2.713;QD=32.27;ReadPosRankSum=0.342;VQSLOD=2.6765;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:84.27:1090,84,0	1/1:0,4:4:12.04:156,12,0	0/0:19,0:18:51.16:0,51,744	0/0:24,0:24:43.42:0,43,651	0/0:25,0:25:72.24:0,72,1072	0/0:15,0:15:45.14:0,45,654	0/0:28,0:28:81.26:0,81,1191	0/0:23,0:23:69.23:0,69,1023	0/0:12,0:12:33.11:0,33,494	0/0:26,0:26:72.24:0,72,1061	0/0:17,0:17:51.17:0,51,762	0/0:8,0:8:24.08:0,24,359	0/0:6,0:6:18.06:0,18,269	0/0:10,0:10:30.10:0,30,443	1/1:0,14:14:39.13:506,39,0	0/0:17,0:17:51.16:0,51,746	0/0:24,0:24:72.24:0,72,1074	0/0:31,0:31:90.30:0,90,1349	0/0:22,0:22:66.21:0,66,970	0/0:10,0:10:24.08:0,24,356	0/0:20,0:20:60.20:0,60,899	0/0:3,0:3:6.02:0,6,88	0/0:16,0:16:42.14:0,42,614	0/0:14,0:14:30.09:0,30,426	0/0:8,0:8:18.06:0,18,268	0/0:21,0:20:60.20:0,60,897	0/0:17,0:17:51.17:0,51,764	0/0:4,0:4:12.04:0,12,180
chr10	93445775	.	TGCTCTTCTAG	T	3480.58	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.664;DP=446;FS=8.087;HRun=0;HaplotypeScore=165.5331;InbreedingCoeff=0.9256;MQ=106.57;MQ0=0;MQRankSum=-9.412;QD=45.20;ReadPosRankSum=1.026;VQSLOD=2.9571;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.21:0,60,2905	0/0:5,0:5:15.05:0,15,661	0/0:24,0:24:51.17:0,51,1604	0/0:47,0:48:99:0,111,4340	0/0:13,0:13:39.13:0,39,1721	0/0:21,0:21:57.20:0,57,2843	0/0:22,0:21:51.18:0,51,2456	0/0:16,0:16:30.10:0,30,1325	0/0:16,0:16:48.16:0,48,2328	0/0:22,0:22:54.14:0,54,2603	0/0:8,0:8:18.06:0,18,677	1/1:2,11:13:27.09:846,27,0	1/1:2,1:3:3.01:94,3,0	1/1:1,5:6:8.87:281,9,0	0/0:12,0:12:33.10:0,33,1516	0/0:13,0:13:30.10:0,30,1539	0/0:18,0:18:45.15:0,45,2172	0/0:20,0:20:54.18:0,54,2741	0/0:10,0:10:15.05:0,15,771	0/0:9,0:9:21.07:0,21,998	0/0:44,0:44:99:0,111,5481	1/1:2,7:9:12.04:349,12,0	1/1:3,5:8:15.05:470,15,0	1/1:6,17:23:15.75:560,16,0	1/1:5,10:15:30.10:879,30,0	0/0:10,0:10:27.09:0,27,1326	0/0:10,0:10:27.09:0,27,1230	0/0:4,0:4:9.03:0,9,434
chr10	93454038	.	G	GTT	805.65	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.399;DP=592;FS=3.671;HRun=8;HaplotypeScore=71.5656;InbreedingCoeff=0.9632;MQ=64.71;MQ0=4;MQRankSum=-0.998;QD=21.77;ReadPosRankSum=3.093;VQSLOD=2.5520;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,117,1281	0/0:4,0:4:9.01:0,9,100	0/0:22,0:18:35.83:0,36,377	0/0:23,0:14:29.90:0,30,295	0/0:16,0:16:45.07:0,45,474	0/0:21,0:21:57.11:0,57,621	0/0:20,0:20:45.08:0,45,492	0/0:31,0:31:66.16:0,66,735	0/0:31,0:31:90.19:0,90,975	0/0:20,0:20:54.11:0,54,580	0/0:7,0:7:18.04:0,18,200	0/0:27,0:27:72.15:0,72,782	0/0:21,0:21:51.12:0,51,568	0/0:28,0:28:78.17:0,78,868	0/0:22,0:22:63.15:0,63,692	0/0:15,0:15:39.10:0,39,434	1/1:2,25:27:54.18:857,54,0	0/0:18,0:18:54.15:0,54,599	0/0:23,0:23:57.14:0,57,628	0/0:11,0:11:33.09:0,33,368	0/0:23,0:24:57.08:0,57,694	0/0:23,0:23:60.13:0,60,651	0/0:11,0:11:30.06:0,30,323	0/0:25,0:25:75.20:0,75,836	0/0:14,0:14:33.08:0,33,368	0/0:31,0:31:90.24:0,90,1002	0/0:22,0:21:60.08:0,60,624	1/1:1,0:10:19.96:69,20,0
chr10	93457771	.	T	TAC	1018.77	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=1.326;DP=385;FS=1.065;HRun=0;HaplotypeScore=61.7071;InbreedingCoeff=0.6848;MQ=76.73;MQ0=1;MQRankSum=-1.305;QD=18.87;ReadPosRankSum=-2.090;VQSLOD=3.2553;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:57.15:0,57,687	0/0:4,0:4:9.03:0,9,113	0/1:21,0:19:5.20:5,0,259	0/0:17,0:17:23.91:0,24,256	0/0:5,0:5:9.03:0,9,112	1/1:3,12:15:36.12:594,36,0	1/1:5,13:18:33.11:544,33,0	0/0:13,0:13:30.09:0,30,375	0/0:14,0:14:30.06:0,30,359	0/0:14,0:14:36.09:0,36,418	0/0:3,0:3:9.03:0,9,113	0/0:13,0:13:30.09:0,30,364	0/0:15,0:15:36.11:0,36,450	0/0:15,0:15:36.06:0,36,422	0/0:17,0:17:42.13:0,42,515	0/0:11,0:11:24.06:0,24,287	0/0:16,0:16:36.12:0,36,451	0/0:10,0:10:21.05:0,21,249	0/0:5,0:5:3.01:0,3,38	0/0:9,0:9:12.04:0,12,150	0/0:36,0:36:75.22:0,75,924	0/0:11,0:11:30.08:0,30,362	0/0:10,0:10:18.06:0,18,225	0/0:27,0:27:48.15:0,48,600	0/0:7,0:7:18.06:0,18,225	0/0:10,0:10:24.08:0,24,300	0/0:16,0:16:23.76:0,24,288	0/0:5,0:5:15.05:0,15,188
chr10	93457796	.	GTGA	G	1569.73	PASS	AB=0.915;AC=28;AF=0.560;AN=50;BaseQRankSum=1.746;DP=286;FS=0.000;HRun=0;HaplotypeScore=49.8831;InbreedingCoeff=0.3102;MQ=64.02;MQ0=7;MQRankSum=0.922;QD=8.01;ReadPosRankSum=1.272;VQSLOD=1.7905;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:26.79:200,27,0	./.	./.	0/1:14,0:9:0:0,0,0	./.	1/1:12,0:12:11.76:96,12,0	1/1:13,0:13:20.96:172,21,0	1/1:8,0:8:5.90:42,6,0	0/1:12,0:12:22.01:45,0,22	1/1:10,0:10:20.99:182,21,0	0/1:6,0:6:20.83:57,0,21	0/0:10,0:10:15:0,15,145	0/0:9,0:9:11.98:0,12,99	0/0:11,0:11:8.98:0,9,73	1/1:14,0:14:17.97:147,18,0	0/1:9,0:9:16.07:32,0,16	0/1:11,0:11:12.18:115,0,12	0/1:3,0:3:15.94:16,0,25	1/1:6,0:5:1.92:22,2,0	1/1:4,0:4:5.99:48,6,0	1/1:29,0:26:17.81:330,18,0	0/0:10,0:9:14.88:0,15,139	0/0:8,0:7:5.99:0,6,50	0/0:17,0:17:20.85:0,21,157	0/0:8,0:8:8.89:0,9,75	0/1:5,7:12:5.68:129,0,6	0/1:6,5:10:17.91:18,0,27	1/1:4,0:4:11.96:94,12,0
chr10	93464189	.	GGC	G	8060.04	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=15.718;DP=722;FS=0.309;HRun=0;HaplotypeScore=90.1018;InbreedingCoeff=0.9058;MQ=72.63;MQ0=3;MQRankSum=-0.935;QD=33.44;ReadPosRankSum=4.643;VQSLOD=7.0944;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,2377	0/0:10,0:10:27.02:0,27,420	0/1:15,0:14:36.12:36,0,185	0/0:8,0:8:9:0,9,125	0/0:21,0:21:60.21:0,60,1068	0/0:22,0:22:63.21:0,63,1098	0/0:34,0:34:99:0,99,1733	0/0:27,0:27:66.22:0,66,1123	0/0:25,0:25:75.26:0,75,1349	0/0:24,0:24:69.24:0,69,1221	0/0:13,0:13:33.11:0,33,573	1/1:3,34:37:99:1386,99,0	1/1:2,26:28:72.21:1008,72,0	1/1:3,28:31:75.25:1050,75,0	0/0:20,0:20:57.19:0,57,1005	0/0:17,0:17:51.17:0,51,914	1/1:1,33:34:96.32:1345,96,0	0/0:35,0:35:99:0,105,1872	0/0:26,0:26:69.24:0,69,1235	0/0:17,0:17:45.14:0,45,781	0/0:99,0:99:99:0,271,4742	1/1:2,17:19:45.15:630,45,0	1/1:1,12:13:30.10:420,30,0	1/1:0,45:43:99:1596,114,0	1/1:1,18:18:42.14:588,42,0	0/0:13,0:13:36.12:0,36,638	0/0:15,0:15:42.14:0,42,745	0/0:8,0:8:24.08:0,24,432
chr10	93465301	.	A	AT	1996.18	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=9.110;DP=467;FS=60.077;HRun=0;HaplotypeScore=92.9024;InbreedingCoeff=0.9452;MQ=53.54;MQ0=32;MQRankSum=-6.345;QD=12.40;ReadPosRankSum=-2.234;VQSLOD=1.3565;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:63.19:0,63,860	0/0:8,0:8:24.08:0,24,332	0/0:38,0:7:17.39:0,17,198	0/0:48,0:12:26.53:0,27,307	1/1:3,11:14:5.85:36,6,0	0/0:14,0:14:36.12:0,36,495	0/0:16,0:16:36.12:0,36,501	1/1:24,0:24:68.25:503,68,0	1/1:4,0:2:5.72:29,6,0	1/1:4,8:9:5.69:56,6,0	1/1:12,0:11:20.21:143,20,0	0/0:16,0:15:45.14:0,45,611	0/0:12,0:11:30.06:0,30,387	0/0:23,0:22:65.87:0,66,849	0/0:12,0:12:33.07:0,33,439	1/1:10,0:9:26.43:169,26,0	0/0:23,0:22:65.54:0,66,832	1/1:8,0:7:20.72:140,21,0	1/1:21,0:17:47.36:347,47,0	1/1:10,0:10:29.32:181,29,0	1/1:10,0:8:20.64:157,21,0	0/0:10,0:10:27.09:0,27,372	0/0:21,0:21:42.11:0,42,546	0/0:21,0:20:45.13:0,45,593	0/0:18,0:16:34:0,34,438	1/1:13,0:13:32.56:223,33,0	1/1:13,0:11:29.04:169,29,0	1/1:10,0:6:11.25:67,11,0
chr10	93466505	.	C	CTG	24709.46	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-15.962;DP=695;FS=4.114;HRun=0;HaplotypeScore=70.7771;InbreedingCoeff=0.9963;MQ=83.03;MQ0=0;MQRankSum=-3.749;QD=49.82;ReadPosRankSum=3.778;VQSLOD=5.7324;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,184,2654	0/0:5,0:5:15.03:0,15,199	0/0:24,0:24:63.16:0,63,859	0/0:19,0:19:52.65:0,53,680	1/1:0,25:25:72.25:1348,72,0	0/0:33,0:33:96.31:0,96,1393	0/0:34,0:34:96.25:0,96,1314	1/1:1,25:26:75.26:1404,75,0	1/1:2,22:24:60.21:1123,60,0	1/1:1,22:23:69.17:1206,69,0	1/1:0,16:16:42.14:786,42,0	1/1:1,18:19:48.16:898,48,0	1/1:1,19:20:51.17:954,51,0	1/1:2,14:17:36.12:674,36,0	0/0:22,0:22:66.20:0,66,931	1/1:1,22:24:63.22:1180,63,0	1/1:2,33:35:96.33:1797,96,0	1/1:0,24:24:66.23:1236,66,0	1/1:8,19:27:69.24:1271,69,0	1/1:0,22:22:66.23:1234,66,0	1/1:0,19:19:45.15:843,45,0	1/1:1,19:21:54.19:1010,54,0	1/1:2,25:27:69.24:1292,69,0	1/1:2,39:41:99:1966,105,0	1/1:0,22:22:66.23:1235,66,0	1/1:1,19:21:60.19:1092,60,0	1/1:0,33:33:96.33:1790,96,0	1/1:1,7:8:21.07:374,21,0
chr10	93466730	.	CT	C	2714.16	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.473;DP=608;FS=6.835;HRun=1;HaplotypeScore=58.0001;InbreedingCoeff=0.9931;MQ=82.37;MQ0=1;MQRankSum=-0.926;QD=36.19;ReadPosRankSum=2.845;VQSLOD=3.9172;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,147,2031	1/1:0,7:7:15.05:208,15,0	0/0:13,0:13:39.11:0,39,547	0/0:28,0:27:60:0,60,844	0/0:17,0:17:51.08:0,51,674	1/1:0,28:28:78.26:1081,78,0	1/1:0,24:24:69.23:958,69,0	0/0:23,0:23:63.20:0,63,909	0/0:22,0:22:66.17:0,66,908	0/0:29,0:29:84.23:0,84,1139	0/0:12,0:12:33.10:0,33,473	0/0:16,0:16:48.16:0,48,718	0/0:22,0:22:66.20:0,66,948	0/0:24,0:24:72.22:0,72,1032	1/1:0,16:16:45.15:626,45,0	0/0:26,0:26:78.19:0,78,1049	0/0:31,0:31:93.28:0,93,1350	0/0:23,0:23:69.17:0,69,985	0/0:23,0:23:69.20:0,69,972	0/0:20,0:20:57.16:0,57,794	0/0:31,0:31:93.28:0,93,1350	0/0:21,0:21:63.20:0,63,921	0/0:11,0:11:33.11:0,33,494	0/0:26,0:26:78.16:0,78,1119	0/0:18,0:18:54.17:0,54,787	0/0:23,0:23:69.22:0,69,1014	0/0:19,0:18:54.18:0,54,807	0/0:6,0:6:18.03:0,18,246
chr10	93468023	.	CGA	C	1617.89	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.366;DP=613;FS=3.068;HRun=0;HaplotypeScore=72.1002;InbreedingCoeff=0.9825;MQ=81.72;MQ0=0;MQRankSum=-3.014;QD=38.52;ReadPosRankSum=2.031;VQSLOD=5.9193;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:42:99:1713,105,0	0/0:6,0:6:18.06:0,18,365	0/0:12,0:12:36.12:0,36,729	0/0:23,0:23:63.99:0,64,1260	0/0:14,0:14:42.14:0,42,841	0/0:19,0:19:57.18:0,57,1119	0/0:23,0:23:69.24:0,69,1388	0/0:29,0:29:87.30:0,87,1755	0/0:11,0:11:33.11:0,33,666	0/0:21,0:21:63.18:0,63,1239	0/0:7,0:7:21.07:0,21,417	0/0:19,0:19:57.19:0,57,1116	0/0:31,0:31:93.26:0,93,1802	0/0:22,0:22:66.21:0,66,1288	0/0:31,0:31:93.31:0,93,1852	0/0:9,0:9:27.09:0,27,548	0/0:37,0:37:99:0,111,2248	0/0:35,0:35:99:0,102,2069	0/0:19,0:19:57.20:0,57,1158	0/0:18,0:18:54.16:0,54,995	0/0:58,0:58:99:0,175,3391	0/0:16,0:16:41.88:0,42,845	0/0:8,0:8:21.05:0,21,391	0/0:36,0:36:99:0,108,2163	0/0:19,0:19:57.20:0,57,1147	0/0:22,0:22:63.21:0,63,1237	0/0:15,0:15:45.15:0,45,913	0/0:11,0:11:33.11:0,33,670
chr10	93468181	.	C	CT	6965.94	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=2.434;DP=531;FS=7.549;HRun=8;HaplotypeScore=79.0102;InbreedingCoeff=0.9938;MQ=68.31;MQ0=4;MQRankSum=-0.556;QD=26.19;ReadPosRankSum=-0.141;VQSLOD=5.2338;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.04:0,72,658	0/0:9,0:9:23.85:0,24,206	0/0:11,0:10:11.02:0,11,84	0/0:16,0:13:24.01:0,24,198	1/1:4,23:27:69.09:752,69,0	0/0:14,0:14:39.01:0,39,352	0/0:24,0:24:56.92:0,57,510	1/1:7,23:31:50.84:784,51,0	1/1:2,11:12:30.09:346,30,0	1/1:4,11:15:33.09:369,33,0	1/1:7,13:20:42.12:477,42,0	0/0:20,0:20:51.01:0,51,464	0/0:16,0:15:42.01:0,42,383	0/0:15,0:15:36:0,36,329	0/0:23,0:23:60.02:0,60,545	1/1:4,15:19:45.13:517,45,0	0/0:32,0:32:86.99:0,87,787	1/1:3,19:20:51.15:588,51,0	1/1:4,18:21:54.15:612,54,0	1/1:1,16:16:48.14:554,48,0	1/1:3,11:14:30.09:346,30,0	0/0:14,0:14:41.99:0,42,376	0/0:13,0:13:39.01:0,39,352	0/0:12,0:12:30.02:0,30,274	0/0:17,0:17:51.03:0,51,466	1/1:2,25:27:66.20:759,66,0	1/1:3,16:18:42.12:480,42,0	1/1:3,17:20:33.10:381,33,0
chr10	93471024	.	AC	A	6740.63	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=11.061;DP=578;FS=0.331;HRun=8;HaplotypeScore=64.7833;InbreedingCoeff=0.9883;MQ=78.96;MQ0=0;MQRankSum=-2.917;QD=22.70;ReadPosRankSum=5.445;VQSLOD=5.0559;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,34:41:96.15:927,96,0	1/1:0,9:9:18.03:174,18,0	0/0:17,0:17:42.02:0,42,465	0/0:8,0:8:14.87:0,15,145	0/0:9,0:9:27.07:0,27,314	1/1:1,15:16:33.05:319,33,0	1/1:2,22:24:57.09:550,57,0	0/0:21,0:21:42.11:0,42,494	0/0:19,0:19:54.16:0,54,641	0/0:23,0:23:66.05:0,66,754	0/0:8,0:8:21.05:0,21,241	1/1:4,21:25:50.94:492,51,0	1/1:1,34:35:90.14:869,90,0	1/1:4,13:17:39.03:369,39,0	1/1:3,26:29:63.10:608,63,0	0/0:12,1:13:10.13:0,10,394	1/1:4,26:30:72.11:695,72,0	0/0:26,0:26:66.18:0,66,784	0/0:18,0:18:33.09:0,33,386	0/0:13,0:13:36.07:0,36,392	0/0:46,0:48:99:0,126,1421	1/1:3,17:20:41.93:405,42,0	1/1:0,8:8:18.03:174,18,0	1/1:2,22:24:66.10:637,66,0	1/1:0,19:19:54.09:521,54,0	0/0:24,0:24:54.16:0,54,642	0/0:21,0:21:57.16:0,57,667	0/0:13,0:13:39.12:0,39,471
chr10	93472487	.	GCCATCACACCCGGTTTA	G	16504.99	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=16.240;DP=582;FS=3.400;HRun=0;HaplotypeScore=281.4441;InbreedingCoeff=0.9972;MQ=88.56;MQ0=0;MQRankSum=-16.313;QD=90.19;ReadPosRankSum=3.786;VQSLOD=3.9270;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,23:29:60.21:2665,60,0	0/0:10,0:10:27.09:0,27,1750	0/0:23,0:23:66.20:0,66,3992	0/0:26,0:26:72.20:0,72,3479	0/0:21,0:21:63.22:0,63,4960	1/1:3,14:17:39.13:1734,39,0	1/1:8,13:21:39.13:1911,39,0	0/0:27,0:27:75.26:0,75,5648	0/0:14,0:14:42.14:0,42,3140	0/0:30,0:30:87.30:0,87,5899	0/0:10,0:10:30.10:0,30,1959	1/1:6,13:19:30.10:1477,30,0	1/1:2,9:11:27.09:1329,27,0	1/1:5,18:23:51.18:2510,51,0	0/0:15,0:15:42.12:0,42,2930	0/0:26,0:26:75.26:0,75,5752	0/0:41,0:40:99:0,123,9462	0/0:30,0:30:90.31:0,90,6170	0/0:19,0:19:54.19:0,54,3560	0/0:19,0:19:54.19:0,54,4012	0/0:43,0:43:99:0,120,9022	1/1:2,11:13:30.10:1396,30,0	1/1:5,9:14:21.07:1012,21,0	1/1:5,15:19:23.80:994,24,0	1/1:6,10:16:30.10:1477,30,0	0/0:21,0:21:63.22:0,63,4922	0/0:18,0:18:51.15:0,51,3871	0/0:6,0:6:18.06:0,18,1156
chr10	93473285	.	GT	G	5435.89	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=7.862;DP=648;FS=7.865;HRun=9;HaplotypeScore=116.4889;InbreedingCoeff=0.9780;MQ=64.81;MQ0=4;MQRankSum=-9.483;QD=20.51;ReadPosRankSum=3.150;VQSLOD=4.2868;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,20:29:56.84:489,57,0	1/1:0,8:8:24.01:219,24,0	0/0:34,2:13:16.06:0,16,124	0/0:22,0:10:3.92:0,4,11	0/0:32,0:32:83.80:0,84,918	1/1:0,16:16:48.03:439,48,0	1/1:4,17:21:48:434,48,0	0/0:36,0:36:75.20:0,75,841	0/0:20,0:20:36.08:0,36,388	0/0:32,0:32:81.16:0,81,886	0/0:19,0:19:54.12:0,54,593	1/1:7,12:19:38.77:309,39,0	1/1:7,14:21:50.94:446,51,0	1/1:5,15:20:50.99:454,51,0	1/1:10,14:24:51:457,51,0	0/0:20,0:20:42.10:0,42,464	1/1:3,23:26:71.94:643,72,0	0/0:23,0:22:50.97:0,51,558	0/0:22,0:22:53.48:0,53,562	0/0:28,0:28:69.14:0,69,763	0/0:15,0:15:33:0,33,325	1/1:4,19:23:63.01:568,63,0	1/1:9,19:28:47.82:413,48,0	1/1:4,7:11:23.88:197,24,0	1/1:4,15:19:41.93:369,42,0	0/0:28,0:28:75.17:0,75,818	0/0:32,0:32:75.18:0,75,843	0/0:15,0:15:41.58:0,42,445
chr10	93473306	.	C	CA	6050	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-16.478;DP=643;FS=1.186;HRun=11;HaplotypeScore=125.5594;InbreedingCoeff=0.8628;MQ=63.27;MQ0=5;MQRankSum=12.791;QD=17.09;ReadPosRankSum=1.069;VQSLOD=4.1745;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:26:30.42:0,30,87	0/0:2,0:8:11.42:0,11,33	0/1:41,0:10:20.88:21,0,22	0/0:25,0:11:7.13:0,7,35	1/1:6,24:32:68.81:641,69,0	0/0:3,0:20:28.87:0,29,85	0/0:9,0:21:19.87:0,20,58	1/1:8,25:33:77.01:737,77,0	1/1:5,14:19:3.84:220,4,0	1/1:5,23:30:48.58:645,49,0	1/1:3,14:20:50.57:458,51,0	0/0:2,0:17:26.48:0,26,77	0/0:4,0:21:29.76:0,30,86	0/0:5,0:21:24.84:0,25,71	0/0:3,0:19:31:0,31,90	1/1:5,11:16:21.04:213,21,0	0/0:9,0:25:33.58:0,34,99	1/1:4,19:22:53.89:520,54,0	1/1:7,18:25:53.92:501,54,0	1/1:11,13:24:3.57:364,4,0	1/1:1,12:13:24.05:244,24,0	0/0:8,0:28:37.88:0,38,108	0/0:2,0:26:40.22:0,40,119	0/0:3,0:9:11.74:0,12,33	0/0:3,0:21:24.92:0,25,73	1/1:4,24:32:54.22:661,54,0	1/1:9,19:28:21.88:429,22,0	1/1:2,13:15:39.08:396,39,0
chr10	93473599	.	A	AGAGG	809.49	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.833;DP=635;FS=0.000;HRun=0;HaplotypeScore=122.6466;InbreedingCoeff=0.9051;MQ=67.94;MQ0=1;MQRankSum=-1.310;QD=33.73;ReadPosRankSum=-1.024;VQSLOD=3.4547;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,12:24:45.01:904,45,0	0/0:9,0:9:15.05:0,15,242	0/0:35,0:25:39.08:0,39,576	0/0:27,0:25:10.47:0,10,418	0/0:23,0:22:48.15:0,48,779	0/0:16,0:16:15.05:0,15,253	0/0:33,0:33:63.19:0,63,1008	0/0:29,0:29:51.16:0,51,827	0/0:24,0:24:48.15:0,48,777	0/0:23,0:23:51.13:0,51,809	0/0:21,0:21:45.15:0,45,757	0/0:26,0:26:45.10:0,45,697	0/0:26,0:26:45.15:0,45,741	0/0:18,0:18:30.10:0,30,501	0/0:23,0:22:42.13:0,42,651	0/0:22,0:22:36.11:0,36,580	0/0:35,0:34:63.21:0,63,1032	0/0:22,0:22:39.13:0,39,653	0/0:20,0:20:36.10:0,36,571	0/0:13,0:13:24.08:0,24,388	0/0:28,0:28:48.15:0,48,771	0/0:22,0:22:30.10:0,30,488	0/0:15,0:15:24.08:0,24,371	0/0:31,0:31:44.26:0,44,662	0/0:15,0:15:15.01:0,15,198	0/0:30,0:30:72.17:0,72,1172	0/0:17,0:17:30.10:0,30,502	0/0:8,0:8:18.06:0,18,304
chr10	93473645	.	C	CGAGACA	19205.86	PASS	AB=0.583;AC=51;AF=0.911;AN=56;BaseQRankSum=-3.965;DP=715;FS=3.827;HRun=0;HaplotypeScore=142.9473;InbreedingCoeff=0.7235;MQ=58.49;MQ0=4;MQRankSum=-7.436;QD=31.49;ReadPosRankSum=4.883;VQSLOD=4.5784;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,13:23:30.10:926,30,0	1/1:3,7:10:21.07:635,21,0	0/0:49,0:38:58.52:0,59,996	0/0:55,0:42:15.91:0,16,1080	1/1:4,14:18:12.04:375,12,0	1/1:19,0:19:9.03:240,9,0	1/1:22,0:22:8.92:169,9,0	1/1:15,23:40:64.79:1450,65,0	1/1:5,19:26:27.09:903,27,0	1/1:4,20:27:63.10:1461,63,0	0/1:6,14:21:0:0,0,0	1/1:31,0:31:27.09:715,27,0	1/1:29,0:29:39.13:1065,39,0	1/1:19,0:19:30.10:800,30,0	1/1:2,15:17:33.11:1063,33,0	1/1:4,19:25:36.12:1187,36,0	1/1:11,26:40:47.19:1471,47,0	1/1:5,19:25:24.08:804,24,0	1/1:4,11:17:39.12:834,39,0	1/1:1,16:19:18.06:480,18,0	1/1:8,17:28:6.02:184,6,0	1/1:22,0:22:12.04:318,12,0	1/1:20,0:20:3.01:80,3,0	1/1:20,0:20:15.05:350,15,0	1/1:16,0:16:6.02:160,6,0	1/1:8,27:35:78.24:2015,78,0	1/1:7,15:22:21.07:702,21,0	1/1:2,12:17:27.01:820,27,0
chr10	93473650	.	C	CAGAGACAGAGACAG	15712.68	PASS	AB=0.998;AC=39;AF=0.722;AN=54;BaseQRankSum=1.858;DP=748;FS=2.235;HRun=0;HaplotypeScore=231.8394;InbreedingCoeff=-0.0410;MQ=57.81;MQ0=4;MQRankSum=-9.303;QD=25.02;ReadPosRankSum=9.295;VQSLOD=2.8408;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:42.68:393,0,43	0/1:11,0:11:31.88:142,0,32	0/0:44,0:36:66.31:0,66,1605	0/0:54,0:41:31.25:0,31,1591	0/1:20,0:20:57.67:58,0,63	1/1:2,18:22:8.87:616,9,0	1/1:2,20:28:7.27:413,7,0	0/1:36,0:36:45.66:1056,0,46	1/1:24,0:24:27.39:229,27,0	0/1:28,0:27:52.27:614,0,52	./.	1/1:5,23:30:27.98:1845,28,0	1/1:6,23:33:39.61:2666,40,0	1/1:1,17:20:29.88:2049,30,0	1/1:17,0:17:31.76:220,32,0	0/1:27,0:27:60.86:311,0,61	0/1:43,0:43:21.24:375,0,21	0/1:27,0:27:47.54:250,0,48	0/1:19,0:19:7.72:524,0,8	0/1:20,0:20:1.39:226,0,1	0/1:28,0:28:49.07:94,0,49	1/1:3,17:23:12.04:810,12,0	1/1:2,17:22:3.48:206,3,0	1/1:6,16:31:9.03:615,9,0	1/1:1,14:20:6.02:411,6,0	1/1:36,0:36:53.80:1145,54,0	1/1:22,0:22:20.94:207,21,0	1/1:17,0:17:8.97:240,9,0
chr10	93476253	.	TCA	T	1498.82	PASS	AB=0.923;AC=16;AF=0.296;AN=54;BaseQRankSum=1.523;DP=734;FS=0.514;HRun=0;HaplotypeScore=138.9520;InbreedingCoeff=0.1101;MQ=59.63;MQ0=13;MQRankSum=2.185;QD=4.74;ReadPosRankSum=1.175;VQSLOD=3.1557;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,23:43:47.64:491,48,0	0/1:16,0:16:12.31:12,0,134	1/1:31,0:8:0.47:1,0,0	./.	0/1:17,1:20:24.56:25,0,65	0/1:20,2:21:23.98:24,0,423	0/0:28,0:29:21.96:0,22,368	0/0:20,0:20:17.88:0,18,159	0/0:8,0:22:20.42:0,20,166	0/0:21,0:20:24.76:0,25,199	0/0:11,0:17:12.18:0,12,103	0/1:30,3:33:50.33:50,0,680	0/0:23,2:26:0.12:0,0,426	0/1:26,4:30:99:109,0,419	0/0:30,0:31:59.88:0,60,516	0/0:11,0:27:18.36:0,18,145	1/1:20,25:48:71.69:736,72,0	0/0:13,0:19:9.94:0,10,80	0/0:8,0:12:7.83:0,8,88	0/0:19,0:20:6.88:0,7,68	0/0:23,0:31:2.34:0,2,11	0/1:21,2:22:34.20:34,0,269	0/1:20,1:21:37.83:38,0,234	0/0:37,3:40:8.97:0,9,720	0/1:17,4:20:99:123,0,292	0/0:14,0:26:17.10:0,17,133	0/0:15,0:34:32.88:0,33,267	1/1:2,0:8:2.84:14,3,0
chr10	93476283	.	A	ACG	2574.25	PASS	AB=0.937;AC=17;AF=0.304;AN=56;BaseQRankSum=2.332;DP=796;FS=18.785;HRun=0;HaplotypeScore=146.3408;InbreedingCoeff=-0.2319;MQ=55.95;MQ0=21;MQRankSum=-0.396;QD=5.37;ReadPosRankSum=4.994;VQSLOD=1.9387;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:45,0:45:5.32:252,5,0	0/1:3,14:17:31.26:245,0,31	0/0:38,0:15:36.03:0,36,360	0/0:34,0:10:23.06:0,23,244	0/0:27,0:27:11.70:0,12,326	0/1:23,0:22:81.61:82,0,191	0/1:25,1:26:99:245,0,131	0/0:24,0:24:65.84:0,66,554	0/1:25,0:25:13.69:14,0,172	0/0:33,0:32:49.49:0,49,621	0/1:18,0:17:54.78:55,0,76	0/1:38,0:38:99:113,0,269	0/1:26,0:26:80.92:81,0,138	0/1:30,0:30:99:160,0,186	0/1:5,27:33:0.84:855,0,1	0/0:31,0:31:15.39:0,15,284	0/1:43,0:43:50.59:208,0,51	0/0:20,0:19:24.94:0,25,226	0/0:16,0:15:19.90:0,20,254	0/0:19,0:19:25.86:0,26,195	0/0:40,0:38:53.41:0,53,434	0/1:31,0:30:84.22:84,0,132	0/1:21,0:21:79.26:79,0,107	0/1:41,0:41:99:169,0,243	0/1:26,0:25:87.41:87,0,115	0/0:25,0:24:14.33:0,14,319	0/1:36,0:35:4.09:4,0,254	0/0:10,0:10:17.85:0,18,129
chr10	93477189	.	G	GC	5377.31	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=5.096;DP=474;FS=30.736;HRun=2;HaplotypeScore=197.9551;InbreedingCoeff=-0.2375;MQ=52.00;MQ0=0;MQRankSum=-2.803;QD=11.34;ReadPosRankSum=10.019;VQSLOD=0.5675;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:36:56.98:332,0,57	1/1:14,0:14:34.61:196,35,0	0/1:7,0:7:25.53:29,0,26	0/1:5,0:5:7.10:56,0,7	0/1:15,0:15:42.96:43,0,72	1/1:13,0:13:30.42:190,30,0	0/1:18,0:18:3.37:203,0,3	1/1:26,1:27:26.07:433,26,0	1/1:22,0:22:46.85:305,47,0	1/1:25,1:26:41.41:376,41,0	1/1:13,1:14:0.71:96,1,0	1/1:13,0:13:27:160,27,0	1/1:18,0:18:22.74:251,23,0	1/1:13,0:13:18.26:188,18,0	1/1:17,0:15:34.98:201,35,0	1/1:19,0:17:30.82:270,31,0	0/1:19,0:19:22.78:169,0,23	0/1:14,0:14:3.97:170,0,4	1/1:10,0:10:21.72:154,22,0	0/1:18,0:18:81.25:98,0,81	0/1:23,0:23:14.29:212,0,14	1/1:13,1:14:10.28:170,10,0	0/1:11,0:11:0.49:71,0,0	0/1:15,0:15:10.40:80,0,10	1/1:18,0:18:33.44:234,33,0	1/1:24,0:24:19.86:317,20,0	1/1:24,0:23:15.04:273,15,0	0/1:7,0:7:0.06:100,0,0
chr10	93477296	.	GT	G	6302.67	PASS	AB=0.971;AC=47;AF=0.839;AN=56;BaseQRankSum=-0.616;DP=509;FS=2.109;HRun=1;HaplotypeScore=191.8438;InbreedingCoeff=-0.1736;MQ=54.14;MQ0=0;MQRankSum=-1.094;QD=12.38;ReadPosRankSum=10.008;VQSLOD=2.8763;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:86.46:187,0,86	0/1:7,1:8:15.08:110,0,15	0/1:8,0:8:7.36:7,0,9	0/1:10,1:11:7.90:81,0,8	1/1:15,0:15:41.04:258,41,0	1/1:12,0:12:14.43:167,14,0	1/1:21,0:21:3.96:220,4,0	0/1:28,0:28:2.64:198,0,3	1/1:27,0:25:67.89:442,68,0	1/1:22,0:22:42.65:346,43,0	1/1:15,1:16:7.14:155,7,0	1/1:26,0:26:38.06:420,38,0	1/1:20,0:20:56:365,56,0	1/1:21,0:21:8.26:295,8,0	1/1:36,0:34:91.42:585,91,0	1/1:20,0:18:12.30:245,12,0	0/1:13,0:13:9.45:116,0,9	1/1:8,0:8:1.41:78,1,0	1/1:9,0:9:4.38:92,4,0	0/1:13,1:14:17.25:119,0,17	0/1:23,0:23:6.27:146,0,6	0/1:15,0:15:31.56:131,0,32	1/1:14,0:14:9.95:169,10,0	1/1:19,0:19:23.56:257,24,0	1/1:23,0:23:40.08:376,40,0	1/1:26,0:26:36.25:359,36,0	1/1:17,0:17:25.23:239,25,0	1/1:8,0:8:23.43:142,23,0
chr10	93480014	.	ATT	A	2901.59	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=7.874;DP=571;FS=2.883;HRun=15;HaplotypeScore=112.3966;InbreedingCoeff=0.9877;MQ=71.22;MQ0=3;MQRankSum=-6.246;QD=17.07;ReadPosRankSum=2.873;VQSLOD=2.9500;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,18:33:68.86:594,69,0	0/0:3,0:13:22.46:0,22,78	0/0:38,0:22:34.98:0,35,311	0/0:30,0:16:12.89:0,13,106	0/0:18,0:23:53.59:0,54,623	1/1:6,8:18:41.04:313,41,0	1/1:7,7:16:29.41:232,29,0	0/0:27,0:34:51.24:0,51,752	0/0:12,0:16:38.02:0,38,402	0/0:14,0:20:36.55:0,37,355	0/0:13,0:20:53.12:0,53,607	1/1:3,14:18:44.89:393,45,0	1/1:6,9:14:29.91:264,30,0	1/1:4,5:9:10.05:171,10,0	0/0:4,0:15:30.46:0,30,135	0/0:9,0:11:23.05:0,23,261	0/0:28,0:34:93.61:0,94,1025	0/0:18,0:18:47.87:0,48,595	0/0:23,0:22:45.05:0,45,539	0/0:21,0:21:43.67:0,44,504	0/0:12,0:14:32.58:0,33,399	1/1:4,13:17:40.28:366,40,0	1/1:7,10:18:38.62:328,39,0	1/1:2,9:11:27.87:238,28,0	1/1:5,8:14:26.63:223,27,0	0/0:30,0:29:63.20:0,63,840	0/0:17,0:19:42.58:0,43,527	0/0:14,0:20:47.06:0,47,511
chr10	93480056	.	T	TGGCTGTCC	24653.36	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=2.077;DP=599;FS=2.752;HRun=0;HaplotypeScore=154.9382;InbreedingCoeff=0.9999;MQ=61.27;MQ0=2;MQRankSum=-18.293;QD=106.72;ReadPosRankSum=1.973;VQSLOD=6.0175;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,18:25:57.13:2344,57,0	1/1:2,12:15:42.14:1862,42,0	0/0:21,0:17:48.16:0,48,1323	0/0:19,0:13:30.95:0,31,830	0/0:26,0:26:78.27:0,78,2361	1/1:5,14:19:57.18:2405,57,0	1/1:6,11:17:45.13:1856,45,0	0/0:37,0:37:99:0,105,2797	0/0:12,0:12:36.04:0,36,1016	0/0:25,0:24:75.26:0,75,2231	0/0:17,0:17:48.15:0,48,1365	1/1:7,11:19:51.15:2200,51,0	1/1:6,12:18:48.12:1826,48,0	1/1:4,14:19:48.10:1962,48,0	1/1:8,15:23:66.21:2776,66,0	0/0:19,0:19:57.17:0,57,1526	0/0:35,0:35:99:0,102,2932	0/0:20,0:20:60.21:0,60,1729	0/0:21,0:19:57.16:0,57,1571	0/0:17,0:17:51.16:0,51,1474	0/0:14,0:14:42.13:0,42,1158	1/1:8,13:21:42.14:1878,42,0	1/1:4,15:19:42.14:1926,42,0	1/1:4,13:17:35.68:1516,36,0	1/1:1,17:18:51.18:2105,51,0	0/0:27,0:27:81.26:0,81,2326	0/0:31,0:31:93.30:0,93,2700	0/0:27,0:27:81.28:0,81,2433
chr10	93480519	.	A	AGTGTGTGT	8644.43	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-4.087;DP=878;FS=19.220;HRun=0;HaplotypeScore=283.4875;InbreedingCoeff=0.6800;MQ=48.37;MQ0=6;MQRankSum=0.783;QD=11.50;ReadPosRankSum=-3.427;VQSLOD=1.4292;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,7:49:6:90,6,0	0/0:6,0:8:4.57:0,5,59	0/0:46,0:27:6.13:0,6,57	0/1:43,0:22:0:0,0,0	1/1:12,0:18:3.16:86,3,0	1/1:19,3:22:9.03:323,9,0	1/1:22,4:29:12.04:341,12,0	1/1:38,0:37:30.10:704,30,0	1/1:26,0:36:17.25:389,17,0	1/1:26,0:29:27.06:698,27,0	1/1:16,0:20:5.81:71,6,0	1/1:26,10:40:18.14:620,18,0	1/1:21,12:33:24.08:826,24,0	1/1:30,11:42:9.03:369,9,0	0/0:18,0:43:31.20:0,31,512	1/1:24,1:34:20.93:661,21,0	1/1:13,0:26:12.02:220,12,0	1/1:24,0:23:12.04:342,12,0	1/1:19,0:22:21.96:636,22,0	1/1:18,0:24:6.91:146,7,0	1/1:65,0:74:4.74:67,5,0	1/1:17,6:26:9.03:350,9,0	0/0:6,0:16:6.02:0,6,109	1/1:25,10:36:0.34:1,0,0	1/1:16,5:23:18.04:581,18,0	1/1:34,0:34:30.07:704,30,0	1/1:21,0:23:12.98:420,13,0	0/0:8,0:12:11.63:0,12,177
chr10	93483550	.	G	GGT	254.20	PASS	AB=0.938;AC=18;AF=0.360;AN=50;BaseQRankSum=0.847;DP=644;FS=9.068;HRun=0;HaplotypeScore=110.7867;InbreedingCoeff=0.3458;MQ=64.50;MQ0=25;MQRankSum=0.042;QD=0.98;ReadPosRankSum=0.910;VQSLOD=1.6507;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:34:0:0,0,0	0/1:9,0:10:0.45:0,0,3	./.	./.	0/0:21,0:21:5.98:0,6,52	1/1:28,0:26:3.01:41,3,0	1/1:27,0:26:6.02:81,6,0	./.	0/0:16,0:19:5.84:0,6,46	0/0:17,0:16:8.89:0,9,85	0/0:13,0:16:5.77:0,6,57	0/1:14,1:18:9.53:20,0,10	1/1:23,0:21:3:27,3,0	0/1:19,0:23:0.08:0,0,0	0/0:10,0:9:0:0,0,0	0/0:29,0:31:14.97:0,15,138	0/0:28,0:33:8.23:0,8,42	0/0:16,0:16:5.97:0,6,44	0/1:21,0:19:4.39:4,0,14	0/0:12,0:12:3.01:0,3,31	0/0:54,0:50:8.66:0,9,62	1/1:12,0:12:3:25,3,0	1/1:15,0:15:2.88:24,3,0	1/1:26,0:28:14.98:149,15,0	0/0:16,0:17:12.32:0,12,101	0/1:16,0:17:19.49:19,0,36	0/0:12,0:11:2.98:0,3,22	0/0:18,0:19:5.84:0,6,44
chr10	93483701	.	T	TAGCACGG	37102.77	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.814;DP=586;FS=18.415;HRun=0;HaplotypeScore=131.2287;InbreedingCoeff=0.9305;MQ=76.89;MQ0=0;MQRankSum=-8.891;QD=68.20;ReadPosRankSum=4.218;VQSLOD=3.7487;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:30.10:826,30,0	1/1:5,3:8:21.03:728,21,0	0/0:19,0:19:41.97:0,42,869	0/0:22,0:23:43.96:0,44,999	1/1:2,9:12:12.04:472,12,0	1/1:2,15:17:33.11:1277,33,0	1/1:8,30:45:81.23:3072,81,0	1/1:15,8:26:60.13:1920,60,0	1/1:2,20:24:63.22:2466,63,0	1/1:2,16:19:48.04:1355,48,0	1/1:1,9:11:8.60:256,9,0	1/1:4,24:30:63.17:2386,63,0	1/1:0,14:16:36.12:1418,36,0	1/1:1,19:23:54.14:2031,54,0	1/1:3,17:21:48.16:1879,48,0	1/1:4,31:39:81.46:3097,81,0	1/1:7,15:24:42.01:1362,42,0	1/1:1,17:23:42.14:1660,42,0	1/1:9,9:19:51.14:1703,51,0	1/1:5,16:21:31.84:1093,32,0	1/1:10,19:33:35.57:1116,36,0	1/1:4,9:15:21.07:828,21,0	1/1:2,8:11:18.06:641,18,0	1/1:3,22:28:39.07:1433,39,0	1/1:1,15:17:33.05:1194,33,0	1/1:1,13:15:42.06:1237,42,0	1/1:1,16:17:33.58:1278,34,0	1/1:1,5:6:12:375,12,0
chr10	93483702	.	A	AGCATGGG	26149.68	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=3.319;DP=503;FS=15.562;HRun=0;HaplotypeScore=160.3847;InbreedingCoeff=0.7008;MQ=81.99;MQ0=0;MQRankSum=-9.649;QD=56.97;ReadPosRankSum=6.523;VQSLOD=3.2725;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:24:39.09:1375,39,0	1/1:7,0:7:18.53:505,19,0	0/0:20,0:20:40.43:0,40,947	0/0:24,0:24:47.49:0,47,1042	1/1:9,0:9:12.04:343,12,0	1/1:12,0:12:33.11:912,33,0	1/1:41,0:40:82.16:2279,82,0	1/1:25,0:25:22.45:1179,22,0	1/1:23,0:24:63.22:1782,63,0	1/1:13,0:13:35.99:795,36,0	1/1:9,0:9:6.52:168,7,0	1/1:27,0:27:61.09:1701,61,0	1/1:13,0:13:36.12:998,36,0	1/1:22,0:22:52.06:1431,52,0	1/1:18,0:18:48.16:1354,48,0	1/1:34,0:33:78:2207,78,0	1/1:20,0:20:16.73:915,17,0	1/1:18,0:18:42.14:1135,42,0	1/1:17,0:16:34.94:895,35,0	1/1:18,0:18:3.89:723,4,0	1/1:23,0:23:10.54:747,11,0	1/1:12,0:12:21.07:598,21,0	0/1:8,0:8:3.93:432,0,4	1/1:23,0:23:35.59:1020,36,0	1/1:14,0:14:29.57:840,30,0	1/1:9,0:9:26.92:678,27,0	1/1:15,0:15:33.11:885,33,0	1/1:4,0:4:9.50:252,10,0
chr10	93483887	.	AT	A	888.70	PASS	AB=0.909;AC=9;AF=0.161;AN=56;BaseQRankSum=5.271;DP=557;FS=9.573;HRun=12;HaplotypeScore=61.5109;InbreedingCoeff=0.6758;MQ=66.49;MQ0=0;MQRankSum=0.918;QD=10.46;ReadPosRankSum=2.766;VQSLOD=2.2752;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,31:39:62.43:611,62,0	1/1:1,6:8:8:52,8,0	0/0:9,0:7:4.43:0,4,18	0/0:12,0:10:4.85:0,5,76	0/0:26,3:29:11.46:0,11,647	0/0:22,0:22:54.11:0,54,548	0/0:24,0:25:64.12:0,64,604	0/0:21,0:22:30.69:0,31,468	0/0:15,0:16:32.89:0,33,314	0/0:20,3:23:10.61:0,11,455	0/0:13,1:15:12.68:0,13,296	0/0:23,2:25:13.66:0,14,500	0/0:18,0:20:50.90:0,51,489	0/0:23,0:23:51.09:0,51,509	1/1:4,13:17:35.82:279,36,0	0/0:28,0:28:66.10:0,66,652	0/0:26,1:27:41.62:0,42,587	0/0:21,3:24:1.59:0,2,370	0/0:22,1:26:36.91:0,37,496	0/0:17,2:19:24.83:0,25,417	0/0:18,0:17:42.04:0,42,416	0/0:27,0:27:60.03:0,60,591	0/1:9,1:10:6.97:7,0,104	0/0:9,1:13:3.49:0,3,188	0/0:11,0:13:13.31:0,13,251	0/0:16,1:17:6.25:0,6,214	0/0:19,0:19:48.06:0,48,472	1/1:2,9:11:11.95:93,12,0
chr10	93484465	.	A	AC	11842.58	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-3.159;DP=600;FS=5.294;HRun=7;HaplotypeScore=76.7333;InbreedingCoeff=0.9913;MQ=78.56;MQ0=0;MQRankSum=-2.064;QD=26.55;ReadPosRankSum=0.901;VQSLOD=5.5954;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:75.85:0,76,726	0/0:11,0:11:30.03:0,30,282	0/0:23,0:24:30.08:0,30,322	0/0:27,0:25:26.36:0,26,372	1/1:1,17:18:50.99:563,51,0	1/1:3,18:21:48.62:575,49,0	1/1:6,27:34:56.83:700,57,0	1/1:7,23:30:63.18:749,63,0	1/1:1,21:22:51.16:616,51,0	1/1:3,18:21:54.13:626,54,0	1/1:0,16:16:42.13:506,42,0	1/1:3,15:19:42.11:491,42,0	1/1:3,21:24:48.15:574,48,0	1/1:2,19:21:51.15:599,51,0	0/0:24,0:24:72.10:0,72,689	1/1:3,19:22:45.08:526,45,0	0/0:37,0:37:99:0,99,944	1/1:1,19:20:51.16:613,51,0	1/1:5,13:18:45.08:490,45,0	1/1:1,9:10:26.92:270,27,0	1/1:6,27:33:63.15:745,63,0	1/1:1,14:16:38.64:429,39,0	1/1:1,7:8:17.80:175,18,0	1/1:3,23:26:63.18:739,63,0	1/1:0,19:19:45.14:542,45,0	1/1:2,15:17:45.10:520,45,0	1/1:3,20:22:54.06:652,54,0	1/1:2,6:8:12.04:144,12,0
chr10	93487687	.	A	AGCTGTAG	13857.06	PASS	AC=18;AF=0.333;AN=54;BaseQRankSum=-7.885;DP=572;FS=2.236;HRun=0;HaplotypeScore=128.5237;InbreedingCoeff=0.9960;MQ=81.83;MQ0=0;MQRankSum=-16.420;QD=68.94;ReadPosRankSum=-0.553;VQSLOD=4.5884;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:7:18.06:0,18,443	0/0:21,0:21:36.07:0,36,777	0/0:15,0:15:33.11:0,33,736	0/0:18,0:18:48.15:0,48,1101	1/1:2,9:11:24.08:897,24,0	1/1:11,25:39:66.18:2254,66,0	0/0:21,0:21:48.11:0,48,981	0/0:21,0:21:63.19:0,63,1442	0/0:17,0:17:42.14:0,42,1003	0/0:12,0:12:33.11:0,33,813	1/1:5,27:32:78.27:2941,78,0	1/1:6,16:23:48.16:1846,48,0	1/1:2,24:28:60.21:2235,60,0	0/0:13,0:13:33.10:0,33,764	0/0:17,0:17:45.15:0,45,1054	0/0:28,0:28:72.25:0,72,1775	0/0:32,0:32:84.24:0,84,1892	0/0:22,0:22:54.18:0,54,1272	0/0:10,0:10:27.09:0,27,666	0/0:61,0:61:99:0,156,3610	1/1:5,12:18:30.53:995,31,0	1/1:3,13:16:18.06:644,18,0	1/1:5,14:22:39.09:1288,39,0	0/0:15,0:15:33.11:0,33,806	0/0:23,0:23:57.20:0,57,1397	0/0:18,0:18:54.19:0,54,1263	1/1:7,4:12:21.07:758,21,0
chr10	93488217	.	TCA	T	8112.69	PASS	AB=0.887;AC=30;AF=0.536;AN=56;BaseQRankSum=9.543;DP=725;FS=12.557;HRun=0;HaplotypeScore=94.4543;InbreedingCoeff=0.7948;MQ=64.17;MQ0=5;MQRankSum=3.332;QD=19.27;ReadPosRankSum=4.316;VQSLOD=4.3693;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,34:46:87.10:1037,87,0	0/0:8,0:8:1.99:0,2,17	0/0:35,0:16:27.07:0,27,373	0/0:44,0:27:48.61:0,49,670	1/1:7,9:17:24.03:270,24,0	0/0:22,0:21:42.10:0,42,633	0/0:29,2:31:3.65:0,4,926	1/1:10,12:22:30.09:357,30,0	1/1:3,28:32:80.73:938,81,0	1/1:3,15:18:42.05:470,42,0	1/1:2,14:18:41.96:479,42,0	0/1:30,3:33:5.29:5,0,865	0/0:33,0:34:79.07:0,79,1358	0/1:20,4:24:64.61:65,0,475	0/0:20,0:19:7.37:0,7,57	1/1:4,16:19:36.11:429,36,0	0/0:15,0:15:5.60:0,6,44	1/1:11,17:28:36.11:429,36,0	1/1:6,8:14:24.07:286,24,0	1/1:5,16:21:42.09:484,42,0	1/1:13,29:44:45.91:884,46,0	0/0:17,0:17:39.08:0,39,558	0/0:30,0:30:60.17:0,60,896	0/0:33,0:34:84.28:0,84,1307	1/1:4,14:18:36.11:429,36,0	1/1:5,20:26:63.02:728,63,0	1/1:11,29:38:69.21:822,69,0	0/0:14,0:14:24.08:0,24,381
chr10	93488239	.	A	ACACACACACACACACAAC	1251.06	PASS	AB=0.929;AC=6;AF=0.107;AN=56;BaseQRankSum=1.725;DP=771;FS=0.838;HRun=0;HaplotypeScore=357.9968;InbreedingCoeff=0.6262;MQ=59.88;MQ0=6;MQRankSum=-4.843;QD=16.25;ReadPosRankSum=-2.345;VQSLOD=1.0887;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,114,3780	1/1:3,0:8:15.05:289,15,0	0/0:48,0:16:32.86:0,33,558	0/0:49,0:31:65.54:0,66,1074	0/0:17,0:17:33.99:0,34,1019	0/1:20,0:20:7.15:7,0,1749	0/0:33,0:34:93.20:0,93,2911	0/0:27,0:27:69.57:0,70,1320	0/0:34,0:34:88.20:0,88,3654	0/0:19,0:19:54.54:0,55,1552	0/0:19,0:19:51.17:0,51,1883	0/0:31,0:31:88.18:0,88,3252	0/0:40,0:40:96.54:0,97,4249	0/0:25,0:25:64.03:0,64,1949	1/1:4,10:30:12.04:656,12,0	0/0:28,0:27:72.24:0,72,2077	0/1:15,0:18:99:427,0,350	0/0:27,0:27:64.76:0,65,1997	0/0:20,0:20:57.55:0,58,1148	0/0:23,0:23:59.71:0,60,1814	0/0:42,0:42:99:0,111,3662	0/0:14,0:14:42.13:0,42,1193	0/0:25,0:26:58.20:0,58,2650	0/0:33,0:33:96.30:0,96,3649	0/0:15,0:16:39.12:0,39,1417	0/0:32,0:32:80.02:0,80,2678	0/0:32,0:31:78.26:0,78,3048	0/0:13,0:13:39.13:0,39,1165
chr10	93489568	.	G	GTCATCATCA	10384.68	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=5.653;DP=768;FS=0.933;HRun=0;HaplotypeScore=335.1158;InbreedingCoeff=0.2115;MQ=64.89;MQ0=1;MQRankSum=-6.707;QD=17.94;ReadPosRankSum=-3.076;VQSLOD=2.7805;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:44,4:46:27.08:693,27,0	1/1:18,0:18:27.05:755,27,0	0/0:29,0:29:44.20:0,44,717	0/0:20,0:20:18.06:0,18,350	0/0:25,0:25:1.28:0,1,4	0/1:26,0:26:61.28:61,0,227	0/0:26,0:26:44.34:0,44,455	0/1:30,0:29:15.37:146,0,15	1/1:27,0:27:30.10:1005,30,0	0/1:23,0:21:20.83:550,0,21	1/1:18,0:18:5.73:202,6,0	0/1:27,0:27:98.75:99,0,218	0/1:35,0:35:99:442,0,330	0/1:42,0:42:41.52:42,0,357	1/1:40,0:40:34.01:775,34,0	1/1:34,0:34:33.11:1062,33,0	0/1:24,0:24:18.03:455,0,18	1/1:18,0:18:7.26:546,7,0	1/1:22,0:22:9.85:396,10,0	1/1:19,0:19:19.28:391,19,0	0/0:29,0:29:2.60:0,3,10	0/0:35,0:35:24:0,24,305	0/0:25,0:24:11.99:0,12,131	0/1:38,0:38:96:112,0,96	1/1:17,0:17:0.94:330,1,0	1/1:27,0:27:36.02:1044,36,0	1/1:34,0:34:45.15:1210,45,0	0/1:12,0:12:71:71,0,309
chr10	93489580	.	A	ATCG	2192.57	PASS	AB=0.968;AC=19;AF=0.339;AN=56;BaseQRankSum=9.840;DP=763;FS=1.815;HRun=0;HaplotypeScore=281.7515;InbreedingCoeff=-0.0500;MQ=52.31;MQ0=2;MQRankSum=-9.074;QD=4.99;ReadPosRankSum=4.070;VQSLOD=1.6383;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:50,0:47:55.14:143,0,55	0/1:18,0:18:72.95:73,0,145	0/0:20,0:20:57.17:0,57,881	0/0:16,0:14:27.03:0,27,376	0/1:24,0:24:32.38:32,0,34	0/0:25,0:25:32.65:0,33,381	0/0:30,0:30:59.99:0,60,743	0/1:37,0:36:42.57:43,0,368	0/1:28,0:28:26.96:275,0,27	0/1:23,0:22:90.07:90,0,193	1/1:19,0:19:8.81:78,9,0	0/0:27,0:27:33.53:0,34,433	0/0:35,0:35:46.40:0,46,562	0/0:42,0:42:62.94:0,63,702	0/1:36,0:36:30.38:30,0,273	1/1:33,0:33:35.79:305,36,0	0/0:21,0:21:26.86:0,27,182	0/1:18,0:18:25.07:147,0,25	0/1:21,0:21:89.52:90,0,163	0/1:15,4:21:48.80:123,0,49	0/1:27,0:27:21.97:37,0,22	0/0:37,0:37:33.05:0,33,438	0/0:25,0:24:27:0,27,296	0/0:33,0:33:20.68:0,21,212	0/1:12,3:16:27.14:145,0,27	0/1:33,0:33:35.58:370,0,36	1/1:34,1:35:15.77:387,16,0	0/0:13,0:13:38.36:0,38,468
chr10	93489586	.	A	ATCATCG	9879.06	PASS	AB=0.836;AC=27;AF=0.482;AN=56;BaseQRankSum=-4.119;DP=775;FS=19.041;HRun=0;HaplotypeScore=291.0875;InbreedingCoeff=-0.7508;MQ=47.51;MQ0=2;MQRankSum=-3.778;QD=13.33;ReadPosRankSum=10.280;VQSLOD=1.8478;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:46:33.20:33,0,46	0/1:13,0:18:18.72:403,0,19	0/0:21,0:21:40.47:0,40,924	0/0:13,0:10:18.06:0,18,347	0/1:12,16:32:1.21:1,0,76	0/1:25,0:25:31.24:31,0,37	0/1:33,0:33:99:103,0,186	0/1:21,0:39:99:1047,0,143	0/1:10,18:29:76.33:953,0,76	0/1:11,13:23:80.76:596,0,81	0/1:6,14:20:57.25:184,0,57	0/1:27,0:27:79.73:80,0,94	0/1:34,0:34:82.87:97,0,83	0/1:41,0:41:99:174,0,184	0/1:31,0:34:12.36:246,0,12	0/1:9,24:33:48.98:867,0,49	0/1:21,0:21:55.66:56,0,93	0/1:5,8:17:10.88:629,0,11	0/1:19,2:21:27.32:678,0,27	0/1:18,5:23:41.90:399,0,42	0/1:9,14:26:36.14:36,0,91	0/1:36,0:36:58.35:58,0,71	0/1:26,0:25:25.58:26,0,123	0/1:31,0:31:35.97:67,0,36	1/1:10,6:16:15.71:426,16,0	0/1:19,17:37:99:1266,0,289	0/1:7,26:35:32.83:1357,0,33	0/1:13,0:13:29.73:65,0,30
chr10	93489595	.	G	GTCATCA	10771.25	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.499;DP=747;FS=7.019;HRun=0;HaplotypeScore=289.9840;InbreedingCoeff=0.5693;MQ=44.77;MQ0=2;MQRankSum=-1.309;QD=15.00;ReadPosRankSum=3.073;VQSLOD=3.1263;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:47,0:45:3.46:25,3,0	1/1:17,0:17:24.05:497,24,0	0/0:18,0:16:16.67:0,17,209	0/0:11,0:8:2.98:0,3,21	1/1:24,3:27:24.24:243,24,0	1/1:22,0:22:5.85:43,6,0	1/1:26,0:26:9.74:85,10,0	1/1:46,0:45:61.32:684,61,0	1/1:14,10:24:48.13:1150,48,0	1/1:24,2:25:45.10:636,45,0	1/1:15,2:17:15.04:307,15,0	1/1:28,0:28:12.14:86,12,0	1/1:32,0:32:6.91:47,7,0	1/1:39,0:39:14.33:144,14,0	1/1:35,0:35:14.96:303,15,0	1/1:24,8:32:45.11:998,45,0	1/1:24,0:24:17.91:165,18,0	1/1:13,3:17:32.99:546,33,0	1/1:23,1:24:29.99:500,30,0	1/1:19,2:21:27.06:548,27,0	1/1:22,0:22:17.91:226,18,0	1/1:36,0:36:8.95:74,9,0	1/1:25,0:24:6.41:49,6,0	1/1:30,0:30:8.45:69,8,0	1/1:12,3:16:12.74:388,13,0	1/1:38,4:42:99:1645,108,0	1/1:22,8:30:57.18:1286,57,0	1/1:13,0:13:3.94:27,4,0
chr10	93489613	.	A	ATCATCT	6064.70	PASS	AB=0.975;AC=20;AF=0.357;AN=56;BaseQRankSum=8.584;DP=713;FS=0.422;HRun=0;HaplotypeScore=282.6907;InbreedingCoeff=-0.1699;MQ=48.89;MQ0=2;MQRankSum=-7.975;QD=12.61;ReadPosRankSum=5.262;VQSLOD=3.0830;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:37:0.07:0,0,93	1/1:12,5:17:33.02:738,33,0	0/0:13,0:11:30.06:0,30,471	0/0:12,0:9:14.05:0,14,165	0/1:26,0:26:20.48:50,0,20	0/0:25,0:25:20.44:0,20,171	0/0:22,0:22:19.15:0,19,150	0/1:38,0:37:99:130,0,139	0/1:25,0:25:24.05:775,0,24	0/1:28,0:27:99:215,0,221	0/1:15,0:15:52.93:176,0,53	0/0:24,0:24:15.29:0,15,115	0/1:30,0:30:24.48:24,0,181	0/0:36,0:36:13.57:0,14,231	0/1:10,20:31:3.83:400,0,4	0/1:31,0:31:7.94:655,0,8	0/1:22,0:22:81.11:126,0,81	1/1:18,0:18:2.09:372,2,0	0/1:26,0:26:99:208,0,327	0/1:20,0:20:0.53:322,0,1	0/1:22,0:22:52.83:68,0,53	0/0:32,0:32:18.32:0,18,150	0/0:25,0:24:27.89:0,28,222	0/0:31,0:31:10.03:0,10,77	0/1:19,0:19:76.77:263,0,77	0/1:43,0:43:11.89:690,0,12	0/1:31,0:31:51.42:853,0,51	0/0:12,0:12:22.04:0,22,153
chr10	93489618	.	C	CATCATC	14315.10	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.163;DP=698;FS=8.878;HRun=0;HaplotypeScore=286.6812;InbreedingCoeff=0.7065;MQ=51.47;MQ0=1;MQRankSum=-1.471;QD=21.33;ReadPosRankSum=2.660;VQSLOD=2.8890;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:37:3.46:25,3,0	1/1:16,0:16:36.09:837,36,0	0/0:15,0:13:16.67:0,17,209	0/0:12,0:9:2.98:0,3,21	1/1:26,0:26:24.24:243,24,0	1/1:27,0:27:20.90:359,21,0	1/1:23,0:23:6.89:81,7,0	1/1:33,0:33:69.06:776,69,0	1/1:25,0:25:51.14:1242,51,0	1/1:27,0:26:45.10:658,45,0	1/1:14,0:14:18.05:378,18,0	1/1:23,0:23:17.68:153,18,0	1/1:31,0:31:21.96:319,22,0	1/1:36,0:36:29.38:520,29,0	1/1:31,0:31:33.03:800,33,0	1/1:31,0:31:51.13:1177,51,0	1/1:16,0:16:17.91:165,18,0	1/1:17,0:17:36:676,36,0	1/1:20,5:26:36.01:589,36,0	1/1:19,0:19:30.07:640,30,0	1/1:18,0:18:20.70:239,21,0	1/1:35,0:35:11.96:152,12,0	1/1:26,0:25:8.66:124,9,0	1/1:30,0:30:11.32:120,11,0	1/1:20,0:20:15.74:480,16,0	1/1:42,0:42:99:1738,108,0	1/1:30,0:30:60.19:1490,60,0	1/1:10,0:10:15.51:335,16,0
chr10	93489638	.	G	GC	899.31	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.843;DP=547;FS=2.638;HRun=3;HaplotypeScore=134.9071;InbreedingCoeff=0.9777;MQ=64.97;MQ0=0;MQRankSum=-3.419;QD=25.69;ReadPosRankSum=-1.873;VQSLOD=2.5585;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:35:72.24:994,72,0	0/0:12,0:12:24.05:0,24,273	0/0:12,0:12:25.99:0,26,287	0/0:13,0:13:33.08:0,33,366	0/0:21,0:21:44.93:0,45,519	0/0:23,0:23:66.03:0,66,767	0/0:23,0:23:60.13:0,60,671	0/0:22,0:22:54.05:0,54,582	0/0:21,0:21:51.14:0,51,596	0/0:27,0:27:73.28:0,73,819	0/0:10,0:10:23.85:0,24,252	0/0:15,0:15:42.09:0,42,470	0/0:18,0:18:48.13:0,48,560	0/0:26,0:26:71.81:0,72,762	0/0:26,0:26:17.97:0,18,185	0/0:18,0:18:48.11:0,48,559	0/0:15,0:15:22.84:0,23,165	0/0:19,0:19:45.14:0,45,539	0/0:18,0:18:54.10:0,54,617	0/0:12,0:12:24.07:0,24,288	0/0:22,0:22:51.13:0,51,588	0/0:23,0:23:57.15:0,57,660	0/0:21,0:21:50.94:0,51,587	0/0:22,0:22:51.16:0,51,609	0/0:12,0:12:24.07:0,24,280	0/0:33,0:33:83.98:0,84,969	0/0:20,0:20:51.14:0,51,597	0/0:8,0:8:24.04:0,24,263
chr10	93491868	.	AC	A	1598.10	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.379;DP=643;FS=0.000;HRun=1;HaplotypeScore=64.5516;InbreedingCoeff=0.9919;MQ=60.63;MQ0=4;MQRankSum=1.689;QD=36.32;ReadPosRankSum=2.759;VQSLOD=3.9846;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,163,2538	1/1:0,17:17:47.99:671,48,0	0/0:22,0:12:36.12:0,36,574	0/0:13,0:10:21.72:0,22,340	0/0:22,0:22:57.19:0,57,911	0/0:23,0:23:69.24:0,69,1103	0/0:22,0:22:66.23:0,66,1055	0/0:30,0:30:87.28:0,87,1343	0/0:21,0:21:63.20:0,63,975	0/0:18,0:18:54.18:0,54,842	0/0:15,0:15:39.13:0,39,623	0/0:32,0:32:96.31:0,96,1495	0/0:27,0:27:81.25:0,81,1249	0/0:25,0:25:75.23:0,75,1171	1/1:0,27:27:75.25:1049,75,0	0/0:21,0:21:60.20:0,60,959	0/0:24,0:24:69.24:0,69,1103	0/0:24,0:24:72.24:0,72,1135	0/0:28,0:25:69.22:0,69,1050	0/0:17,0:17:51.17:0,51,815	0/0:36,0:36:99:0,108,1695	0/0:14,0:14:42.14:0,42,671	0/0:9,0:9:21.05:0,21,311	0/0:33,0:33:96.33:0,96,1535	0/0:13,0:13:39.13:0,39,624	0/0:21,0:21:63.21:0,63,983	0/0:28,0:28:84.26:0,84,1316	0/0:6,0:6:18.06:0,18,288
chr10	93492594	.	T	TA	5509.68	PASS	AB=0.900;AC=27;AF=0.482;AN=56;BaseQRankSum=-10.954;DP=437;FS=1.877;HRun=8;HaplotypeScore=48.7336;InbreedingCoeff=0.8802;MQ=57.73;MQ0=14;MQRankSum=-0.871;QD=24.17;ReadPosRankSum=-2.104;VQSLOD=4.5483;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.03:0,96,879	0/0:9,0:9:27.01:0,27,247	0/0:25,0:6:9.85:0,10,65	0/0:21,0:5:3.86:0,4,73	1/1:1,12:13:36.10:409,36,0	0/0:16,0:16:45.02:0,45,412	0/0:9,0:9:15.01:0,15,137	1/1:6,18:24:54.10:596,54,0	1/1:4,10:14:27.08:312,27,0	1/1:2,14:16:39.11:448,39,0	1/1:5,8:13:15.04:173,15,0	0/0:13,0:13:30:0,30,270	0/0:13,0:12:30.02:0,30,274	0/0:12,0:12:24.01:0,24,220	0/0:14,0:14:39.01:0,39,353	1/1:2,7:9:18.05:208,18,0	0/0:18,0:17:45.02:0,45,411	1/1:2,22:24:54.16:622,54,0	1/1:6,15:22:50.82:548,51,0	1/1:2,11:14:36.10:410,36,0	1/1:2,7:9:21.06:242,21,0	0/0:5,0:5:9:0,9,82	0/1:8,1:9:13.57:14,0,144	0/0:14,0:14:23.97:0,24,212	1/1:2,13:15:11.65:388,12,0	1/1:7,20:27:60.13:656,60,0	1/1:2,15:17:42.12:485,42,0	0/0:4,0:4:12.01:0,12,110
chr10	93492611	.	G	GA	1795.22	PASS	AB=0.582;AC=16;AF=0.286;AN=56;BaseQRankSum=-8.205;DP=466;FS=1.075;HRun=9;HaplotypeScore=61.1910;InbreedingCoeff=0.7888;MQ=58.95;MQ0=8;MQRankSum=0.905;QD=17.10;ReadPosRankSum=3.556;VQSLOD=3.9050;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,989	0/0:13,0:13:29.99:0,30,260	0/0:23,0:7:8.90:0,9,64	0/0:17,0:4:8.85:0,9,60	0/0:18,0:18:47.93:0,48,407	1/1:4,15:19:21.91:453,22,0	1/1:0,10:10:18.05:199,18,0	0/0:33,0:33:95.95:0,96,825	0/0:11,0:11:32.99:0,33,286	0/0:20,0:20:53.99:0,54,469	0/0:12,0:12:26.98:0,27,234	1/1:2,14:16:27.07:299,27,0	1/1:1,12:12:27.07:299,27,0	1/1:3,9:12:21.06:232,21,0	0/0:16,0:16:41.99:0,42,364	0/0:9,0:9:23.99:0,24,208	0/0:16,0:15:41.99:0,42,364	0/0:24,0:24:59.93:0,60,511	0/0:28,0:26:71.97:0,72,624	0/0:12,0:12:23.99:0,24,208	0/0:9,0:9:26.98:0,27,230	0/1:1,6:7:13.94:88,0,14	1/1:1,10:11:27.07:299,27,0	0/1:4,6:10:16.75:57,0,17	0/0:18,0:18:44.78:0,45,378	0/0:23,1:24:29.79:0,30,487	0/0:19,0:19:44.99:0,45,389	1/1:3,4:7:6.02:66,6,0
chr10	93492804	.	CT	C	1839.45	PASS	AB=0.721;AC=38;AF=0.679;AN=56;BaseQRankSum=-1.820;DP=409;FS=0.000;HRun=14;HaplotypeScore=60.5536;InbreedingCoeff=0.1896;MQ=73.20;MQ0=2;MQRankSum=0.963;QD=5.86;ReadPosRankSum=3.640;VQSLOD=2.1592;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,14:24:21.86:148,22,0	0/0:3,0:3:6.01:0,6,56	0/0:29,2:13:1.27:0,1,43	0/0:34,0:17:10.27:0,10,66	0/1:5,6:11:10.05:85,0,10	1/1:8,12:20:29.63:205,30,0	0/1:15,8:24:51.23:98,0,51	1/1:6,10:16:24.69:182,25,0	1/1:4,8:13:10.88:67,11,0	1/1:4,4:8:10.73:66,11,0	0/1:7,4:11:15.63:31,0,16	0/1:6,2:9:6.34:54,0,6	1/1:3,1:5:4.94:26,5,0	1/1:3,2:5:2.89:20,3,0	0/0:21,0:20:27.24:0,27,356	0/1:8,4:12:12.68:50,0,13	0/1:15,16:33:13.35:160,0,13	1/1:7,1:8:7.80:46,8,0	1/1:6,11:17:29.41:236,29,0	1/1:3,3:6:8.88:62,9,0	0/1:13,4:17:16.82:98,0,17	1/1:9,2:11:2.80:20,3,0	0/1:4,3:7:14.58:15,0,22	1/1:7,5:12:20.50:135,21,0	1/1:5,8:14:10.40:67,10,0	1/1:3,7:15:17.93:100,18,0	1/1:8,7:15:5.69:41,6,0	0/0:3,0:3:8.98:0,9,74
chr10	93493889	.	ATTGTTG	A	3183.14	PASS	AB=0.842;AC=21;AF=0.375;AN=56;BaseQRankSum=8.456;DP=607;FS=40.574;HRun=0;HaplotypeScore=128.7112;InbreedingCoeff=0.8797;MQ=55.39;MQ0=4;MQRankSum=-9.447;QD=16.84;ReadPosRankSum=1.406;VQSLOD=1.6262;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,3:15:24.07:277,0,24	0/0:1,0:17:20.16:0,20,63	0/0:18,0:10:12.04:0,12,260	0/0:12,0:9:9.02:0,9,115	0/0:30,0:30:69.21:0,69,2041	1/1:3,8:11:18.06:375,18,0	1/1:4,13:17:9.03:188,9,0	0/0:38,0:38:63.19:0,63,1744	0/0:23,0:23:51.18:0,51,1535	0/0:28,0:28:69.24:0,69,2188	0/0:15,0:15:30.10:0,30,917	1/1:6,6:12:9.03:188,9,0	1/1:12,10:22:15.05:313,15,0	1/1:9,14:23:18.06:375,18,0	0/0:11,0:32:29.80:0,30,119	0/0:26,0:25:51.12:0,51,1450	1/1:7,0:22:15.05:206,15,0	0/0:24,0:23:42.14:0,42,1256	0/0:16,0:14:15.05:0,15,396	0/0:34,0:34:69.24:0,69,2053	0/0:23,0:23:51.13:0,51,1451	1/1:9,11:20:23.93:381,24,0	1/1:4,10:14:26.93:552,27,0	1/1:18,2:20:17.97:230,18,0	0/0:16,0:16:36.11:0,36,1001	0/0:39,0:39:93.28:0,93,2730	0/0:27,0:27:51.17:0,51,1598	1/1:3,9:12:15.05:313,15,0
chr10	93494465	.	G	GT	3512.33	PASS	AB=0.796;AC=18;AF=0.321;AN=56;BaseQRankSum=-4.654;DP=523;FS=20.700;HRun=10;HaplotypeScore=61.8120;InbreedingCoeff=0.7884;MQ=72.27;MQ0=0;MQRankSum=-0.109;QD=17.30;ReadPosRankSum=-0.940;VQSLOD=2.3138;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,30:34:69.09:711,69,0	0/0:1,0:5:5.89:0,6,17	0/1:16,0:14:25.16:25,0,59	0/0:12,0:14:7:0,7,112	0/0:20,0:20:32.91:0,33,271	1/1:1,15:16:30.08:320,30,0	1/1:4,27:33:47.22:675,47,0	0/0:25,1:28:31.97:0,32,443	0/0:12,0:13:22.97:0,23,178	0/0:14,0:14:29.95:0,30,246	0/0:16,0:17:13.19:0,13,208	1/1:1,13:16:32.75:316,33,0	0/1:5,11:16:16.18:253,0,16	1/1:0,18:20:38.80:378,39,0	0/0:4,0:19:28.53:0,29,84	0/0:19,0:19:44.91:0,45,369	0/0:29,0:29:61.14:0,61,496	0/0:20,0:20:47.92:0,48,393	0/0:17,0:17:32.91:0,33,268	0/0:21,0:21:50.91:0,51,418	0/0:25,0:25:53.89:0,54,442	1/1:0,6:6:9.02:96,9,0	1/1:6,8:14:23.73:255,24,0	1/1:5,25:32:25.44:483,25,0	0/0:16,0:16:26.88:0,27,219	0/0:16,0:16:44.94:0,45,369	0/0:15,1:16:9.85:0,10,283	0/0:3,0:11:21.78:0,22,71
chr10	93495393	.	GAATAAATAAATAAATA	G	1135.24	PASS	AC=10;AF=0.263;AN=38;BaseQRankSum=3.724;DP=222;FS=3.065;HRun=0;HaplotypeScore=101.9484;InbreedingCoeff=0.6072;MQ=54.21;MQ0=0;MQRankSum=-3.929;QD=17.20;ReadPosRankSum=2.906;VQSLOD=1.7287;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,8:18:3.01:132,3,0	0/0:7,0:7:9.03:0,9,461	./.	./.	0/0:8,0:8:6.02:0,6,353	1/1:5,10:15:12.04:530,12,0	./.	0/0:25,0:25:39.13:0,39,1824	0/0:8,0:8:9.02:0,9,455	0/0:6,0:6:6.02:0,6,423	./.	1/1:2,3:5:3.01:132,3,0	1/1:1,1:2:3.01:132,3,0	./.	0/0:9,0:9:12.04:0,12,608	0/0:2,0:2:3.01:0,3,215	1/1:14,0:26:8.82:335,9,0	0/0:15,0:15:30.10:0,30,1880	0/0:10,0:11:18.06:0,18,1022	./.	0/0:3,0:3:3.01:0,3,216	./.	./.	./.	0/0:7,0:7:12.04:0,12,698	0/0:5,0:5:6.02:0,6,407	0/0:10,0:10:6.02:0,6,408	0/0:9,0:11:18.06:0,18,611
chr10	93495397	.	A	AAATG	508.63	PASS	AB=1.000;AC=6;AF=0.111;AN=54;BaseQRankSum=0.916;DP=207;FS=3.761;HRun=0;HaplotypeScore=53.7103;InbreedingCoeff=0.3453;MQ=54.64;MQ0=1;MQRankSum=-2.700;QD=18.84;ReadPosRankSum=-1.689;VQSLOD=2.3772;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:20.86:0,21,168	1/1:1,3:4:11.99:237,12,0	0/1:5,0:3:7.97:8,0,28	0/0:4,0:3:3:0,3,28	0/0:7,0:7:20.83:0,21,178	0/0:15,0:15:27:0,27,252	0/0:3,0:3:5.98:0,6,49	0/0:27,0:27:68.99:0,69,772	0/0:8,0:8:18.02:0,18,219	0/0:6,0:6:14.95:0,15,181	./.	0/0:5,0:5:8.99:0,9,81	0/0:1,0:1:3.01:0,3,33	0/0:3,0:3:9:0,9,79	1/1:4,3:7:20.95:316,21,0	0/0:2,0:2:6.01:0,6,85	0/0:25,0:25:32.23:0,32,231	0/0:15,0:15:42.06:0,42,560	0/0:10,0:10:26.75:0,27,339	0/0:5,0:5:5.97:0,6,44	0/0:1,0:1:3.01:0,3,56	0/0:2,0:2:2.98:0,3,21	0/0:2,0:2:2.98:0,3,21	0/0:2,0:2:6:0,6,53	0/0:7,0:7:17.95:0,18,199	0/0:5,0:5:14.99:0,15,175	0/0:8,0:8:17.96:0,18,206	0/1:11,0:11:72.82:73,0,112
chr10	93495442	.	TA	T	473.11	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.053;DP=209;FS=5.046;HRun=8;HaplotypeScore=37.6637;InbreedingCoeff=0.6774;MQ=63.43;MQ0=3;MQRankSum=-2.618;QD=19.71;ReadPosRankSum=4.646;VQSLOD=3.1153;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:21.05:0,21,241	1/1:0,6:6:15.02:145,15,0	0/0:8,0:5:15.01:0,15,139	0/0:5,0:3:6.02:0,6,72	0/0:9,0:9:24.06:0,24,278	0/0:13,0:13:20.89:0,21,214	0/0:3,0:3:9.03:0,9,109	0/0:21,0:21:48.15:0,48,580	0/0:3,0:3:9.03:0,9,109	0/0:4,0:4:12.04:0,12,145	0/0:5,0:5:15.05:0,15,181	0/0:4,0:4:6.02:0,6,72	0/0:5,0:5:15.03:0,15,169	0/0:4,0:4:9.03:0,9,109	1/1:0,6:6:12.02:116,12,0	0/0:3,0:3:9.03:0,9,109	0/0:19,0:19:33.10:0,33,388	0/0:11,0:11:33.10:0,33,399	0/0:16,0:16:36.10:0,36,422	0/0:6,0:6:15.02:0,15,158	0/0:6,0:6:18.03:0,18,193	0/0:2,0:2:6.02:0,6,72	0/0:1,0:1:3.01:0,3,36	0/0:2,0:2:6.02:0,6,72	0/0:10,0:10:30.07:0,30,340	0/0:1,0:1:3.01:0,3,36	0/0:10,0:10:27.07:0,27,314	1/1:0,12:12:36.06:347,36,0
chr10	93495817	.	T	TA	631.76	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-5.988;DP=472;FS=1.771;HRun=7;HaplotypeScore=48.7819;InbreedingCoeff=0.7787;MQ=73.25;MQ0=0;MQRankSum=0.112;QD=14.69;ReadPosRankSum=1.467;VQSLOD=3.0428;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.11:0,96,909	1/1:1,10:11:24.07:286,24,0	0/1:12,0:8:3.40:3,0,23	0/0:14,0:11:17.64:0,18,123	0/0:24,0:24:60.08:0,60,574	0/0:16,0:16:48.06:0,48,457	0/0:12,0:12:33.02:0,33,304	0/0:34,0:34:81.04:0,81,756	0/0:17,0:17:51.07:0,51,487	0/0:23,0:23:66.08:0,66,623	0/0:12,0:12:36.06:0,36,347	0/0:7,0:7:21.03:0,21,198	0/0:17,0:17:48.05:0,48,453	0/0:15,0:15:42.05:0,42,399	1/1:1,19:20:39.12:465,39,0	0/0:8,0:8:18.03:0,18,173	0/0:26,0:26:72.07:0,72,680	0/0:21,0:21:57.09:0,57,548	0/0:15,0:15:33.03:0,33,312	0/0:21,0:21:60.04:0,60,561	0/0:4,0:4:9.01:0,9,83	0/0:5,0:5:15.01:0,15,137	0/0:10,0:10:27.02:0,27,252	0/0:7,0:7:8.06:0,8,156	0/0:24,0:24:69.11:0,69,665	0/0:19,0:19:54.55:0,55,517	0/0:20,0:20:57.08:0,57,545	0/0:22,0:21:66.09:0,66,630
chr10	93496753	.	T	TG	552.99	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.215;DP=631;FS=3.630;HRun=2;HaplotypeScore=64.2277;InbreedingCoeff=0.9658;MQ=88.23;MQ0=0;MQRankSum=-4.000;QD=36.87;ReadPosRankSum=0.126;VQSLOD=4.1619;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,1184	0/0:8,0:8:21.07:0,21,260	0/0:27,0:27:69.20:0,69,826	0/0:18,0:18:44.90:0,45,509	0/0:13,0:13:39.11:0,39,473	0/0:19,0:19:54.16:0,54,656	0/0:27,0:27:78.24:0,78,967	0/0:19,0:19:48.14:0,48,585	0/0:19,0:19:55.40:0,55,648	0/0:17,0:17:45.13:0,45,541	0/0:6,0:6:12.02:0,12,149	0/0:28,0:28:84.26:0,84,1040	0/0:20,0:20:54.17:0,54,669	0/0:28,0:28:78.20:0,78,928	0/0:29,0:29:81.25:0,81,1003	0/0:20,0:20:60.16:0,60,719	0/0:40,0:40:99:0,117,1436	0/0:26,0:26:75.22:0,75,916	0/0:24,0:24:60.19:0,60,742	0/0:17,0:17:50.83:0,51,606	0/0:50,0:50:99:0,150,1826	0/0:19,0:19:54.17:0,54,669	0/0:10,0:10:30.04:0,30,344	0/0:25,0:25:75.19:0,75,912	0/0:13,0:13:38.86:0,39,457	0/0:37,0:37:99:0,105,1285	0/0:21,0:21:63.20:0,63,780	1/1:0,15:15:45.15:648,45,0
chr10	93497201	.	CT	C	1288.31	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.145;DP=512;FS=0.000;HRun=1;HaplotypeScore=50.3715;InbreedingCoeff=0.9380;MQ=93.48;MQ0=0;MQRankSum=-3.506;QD=37.89;ReadPosRankSum=0.549;VQSLOD=3.7150;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:99:1383,99,0	0/0:6,0:6:18.06:0,18,286	0/0:27,0:27:74.79:0,75,1091	0/0:18,0:18:45.10:0,45,691	0/0:7,0:7:21.07:0,21,336	0/0:13,0:13:39.12:0,39,599	0/0:31,0:31:93.32:0,93,1482	0/0:31,0:31:87.30:0,87,1389	0/0:18,0:18:51.17:0,51,805	0/0:24,0:24:72.25:0,72,1149	0/0:6,0:6:18.06:0,18,288	0/0:15,0:15:45.14:0,45,681	0/0:25,0:25:69.22:0,69,1077	0/0:17,0:17:51.17:0,51,812	0/0:16,0:16:48.16:0,48,767	0/0:17,0:17:51.17:0,51,815	0/0:40,0:40:99:0,117,1822	0/0:24,0:24:72.20:0,72,1123	0/0:19,0:19:54.18:0,54,839	0/0:5,0:5:15.05:0,15,240	0/0:34,0:34:96.33:0,96,1529	0/0:6,0:6:18.04:0,18,243	0/0:8,0:8:24.07:0,24,359	0/0:24,0:24:72.23:0,72,1122	0/0:7,0:7:21.07:0,21,334	0/0:13,0:13:36.11:0,36,554	0/0:22,0:22:66.16:0,66,1003	0/0:5,0:5:15.04:0,15,217
chr10	93498605	.	GCA	G	2759.24	PASS	AB=0.856;AC=29;AF=0.558;AN=52;BaseQRankSum=7.341;DP=594;FS=0.976;HRun=0;HaplotypeScore=101.8848;InbreedingCoeff=0.1097;MQ=63.07;MQ0=7;MQRankSum=-0.140;QD=6.08;ReadPosRankSum=2.747;VQSLOD=3.2323;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:36,9:45:20.66:417,21,0	0/0:3,0:12:5.80:0,6,46	./.	./.	0/1:8,4:12:17.91:18,0,135	0/1:11,13:24:2.78:236,0,3	1/1:27,9:39:47.60:450,48,0	0/0:21,0:20:23.02:0,23,148	0/1:11,1:11:17.89:18,0,165	0/1:14,2:16:30.14:30,0,239	0/1:14,0:14:17.83:18,0,165	1/1:10,9:21:23.73:226,24,0	1/1:12,6:19:20.83:190,21,0	1/1:10,10:24:8.06:248,8,0	0/0:3,0:17:9:0,9,81	0/0:15,0:21:12.93:0,13,269	0/0:23,0:33:62.68:0,63,584	0/1:24,3:29:71.32:71,0,617	0/1:11,0:11:12.91:13,0,154	0/0:9,0:9:18.03:0,18,218	0/1:50,4:53:88.91:89,0,464	1/1:10,2:13:11.86:113,12,0	1/1:9,4:14:17.70:152,18,0	1/1:23,21:47:17.49:408,17,0	0/1:10,3:12:24.03:24,0,80	0/1:15,1:19:67.99:68,0,233	0/1:15,5:21:99:118,0,243	1/1:5,0:7:5.78:32,6,0
chr10	93500068	.	GA	G	1115.41	PASS	AB=0.820;AC=36;AF=0.643;AN=56;BaseQRankSum=2.268;DP=549;FS=3.246;HRun=17;HaplotypeScore=67.7637;InbreedingCoeff=0.0210;MQ=65.11;MQ0=12;MQRankSum=1.091;QD=2.79;ReadPosRankSum=4.328;VQSLOD=-0.6543;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,1:37:22.94:66,23,0	0/0:4,0:11:3.93:0,4,26	0/0:55,1:20:3.25:0,3,49	0/0:60,0:12:3.65:0,4,35	0/1:10,7:17:32.08:33,0,32	1/1:12,2:23:25.60:106,26,0	1/1:9,0:19:18.74:74,19,0	0/1:21,2:24:43.47:48,0,43	0/1:11,1:12:26.10:45,0,26	1/1:13,1:15:20.57:95,21,0	0/1:13,1:14:28.18:28,0,29	1/1:15,0:19:12.58:46,13,0	1/1:11,0:11:1.94:5,2,0	1/1:3,1:11:8.82:33,9,0	0/0:5,0:12:5.80:0,6,33	0/1:14,1:16:41.07:41,0,42	1/1:7,0:27:25.04:71,25,0	0/1:22,3:25:29:129,0,29	0/1:8,4:12:50.05:50,0,86	1/1:9,5:13:11.36:56,11,0	0/1:8,1:9:35.39:40,0,35	1/1:8,0:15:9.55:28,10,0	1/1:5,1:15:12.40:44,12,0	1/1:6,0:13:19.78:65,20,0	0/1:6,9:16:21.41:63,0,21	1/1:12,9:22:3.77:100,4,0	0/1:5,8:13:10.33:10,0,13	0/0:4,3:7:0:0,0,0
chr10	93500704	.	GATCT	G	1622.77	PASS	AB=0.788;AC=24;AF=0.480;AN=50;BaseQRankSum=5.567;DP=678;FS=0.698;HRun=0;HaplotypeScore=120.9593;InbreedingCoeff=0.7272;MQ=71.61;MQ0=7;MQRankSum=1.116;QD=5.23;ReadPosRankSum=0.185;VQSLOD=2.4262;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:46:0:0,0,0	0/0:13,0:13:12.03:0,12,233	./.	./.	0/0:33,0:33:3.19:0,3,24	1/1:11,0:19:9.01:84,9,0	1/1:16,0:16:2.48:5,2,0	./.	0/0:19,0:30:18.06:0,18,313	0/0:20,0:24:39.09:0,39,636	0/0:15,0:15:12.04:0,12,233	1/1:13,8:22:15.04:207,15,0	1/1:17,12:29:23.87:358,24,0	1/1:18,6:25:15.04:207,15,0	0/0:35,0:35:27.09:0,27,607	1/1:24,6:30:9.03:134,9,0	1/1:24,0:30:9.01:84,9,0	1/1:7,9:16:9.01:127,9,0	0/0:13,0:12:9.03:0,9,201	1/1:16,7:23:11.79:122,12,0	0/0:44,0:44:23.91:0,24,474	0/1:14,6:20:57.02:122,0,57	1/1:15,4:18:6.02:90,6,0	1/1:7,7:14:18.06:268,18,0	0/0:25,0:25:39.11:0,39,797	0/0:22,0:22:12.04:0,12,236	0/0:28,0:28:25.33:0,25,532	0/0:16,0:15:2.97:0,3,20
chr10	93501008	.	AG	A	11193.98	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=1.221;DP=614;FS=1.902;HRun=8;HaplotypeScore=73.0729;InbreedingCoeff=0.9793;MQ=79.27;MQ0=0;MQRankSum=-3.789;QD=22.66;ReadPosRankSum=4.608;VQSLOD=5.2782;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,42:47:99:1014,105,0	0/0:5,0:5:15.05:0,15,181	0/0:19,0:19:18.15:0,18,362	0/0:29,0:28:60.86:0,61,610	1/1:1,13:14:39.06:377,39,0	1/1:1,23:24:60.10:579,60,0	1/1:3,21:24:45.07:435,45,0	1/1:7,27:34:72.10:695,72,0	1/1:9,30:39:87.13:840,87,0	1/1:2,15:17:45.06:429,45,0	1/1:0,6:6:15.02:145,15,0	1/1:4,28:32:72.11:695,72,0	1/1:1,21:22:54.09:521,54,0	1/1:3,16:19:51.07:491,51,0	0/0:23,0:23:60.18:0,60,725	1/1:3,27:30:72.11:695,72,0	0/0:27,0:27:75.22:0,75,894	1/1:3,29:32:81.13:782,81,0	1/1:5,19:24:57.06:543,57,0	1/1:0,11:11:30.05:288,30,0	1/1:1,29:30:78.12:753,78,0	1/1:2,5:7:12.01:116,12,0	1/1:2,9:11:21.03:203,21,0	1/1:4,16:20:45.07:435,45,0	1/1:1,13:14:36.06:348,36,0	1/1:3,8:11:24.03:231,24,0	1/1:3,23:26:60.09:579,60,0	0/0:15,1:16:13.08:0,13,400
chr10	93501222	.	TTTTATTTA	T	3722.67	PASS	AB=0.669;AC=38;AF=0.760;AN=50;BaseQRankSum=-2.734;DP=278;FS=34.110;HRun=0;HaplotypeScore=71.0794;InbreedingCoeff=0.4041;MQ=72.21;MQ0=4;MQRankSum=-4.259;QD=18.16;ReadPosRankSum=-3.120;VQSLOD=0.1356;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,5:11:3.01:45,3,0	0/0:4,0:4:9.03:0,9,236	0/0:13,0:6:0:0,0,0	0/0:22,0:12:2.15:0,2,9	1/1:1,5:6:8.99:142,9,0	1/1:2,9:11:12.04:243,12,0	./.	1/1:33,0:33:33.10:478,33,0	1/1:3,3:6:6.02:121,6,0	1/1:4,4:8:12.04:264,12,0	1/1:5,0:5:3.01:45,3,0	1/1:0,5:5:15.05:319,15,0	1/1:3,2:5:3.01:76,3,0	1/1:4,4:8:6.02:153,6,0	0/0:6,0:6:12.04:0,12,362	1/1:3,4:7:6.02:122,6,0	1/1:8,9:17:12.04:252,12,0	0/1:9,13:23:56.07:406,0,56	0/1:8,0:12:27.59:28,0,90	1/1:9,7:16:20.97:337,21,0	1/1:2,1:3:3.01:45,3,0	./.	1/1:1,1:2:3.01:76,3,0	./.	1/1:3,5:8:12.04:274,12,0	1/1:4,3:7:9.01:175,9,0	1/1:7,3:10:6.02:122,6,0	0/0:10,0:24:41.88:0,42,337
chr10	93501228	.	TTA	T	436.86	PASS	AB=0.986;AC=19;AF=0.352;AN=54;BaseQRankSum=7.487;DP=274;FS=11.371;HRun=0;HaplotypeScore=53.8129;InbreedingCoeff=-0.3282;MQ=70.40;MQ0=7;MQRankSum=-3.813;QD=2.32;ReadPosRankSum=3.082;VQSLOD=-0.1904;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:11.98:0,12,139	0/0:4,0:4:12.02:0,12,194	0/0:12,0:5:2.77:0,3,62	0/0:24,3:12:14.79:0,15,117	0/1:6,0:6:1.30:1,0,89	0/1:11,0:11:6.07:6,0,105	./.	0/1:22,10:32:99:342,0,544	0/1:5,0:5:0.01:0,0,91	0/1:7,0:7:11.07:11,0,87	0/0:3,1:4:9.01:0,9,96	0/1:5,0:5:21.07:21,0,24	0/1:4,0:4:2.96:3,0,75	0/1:8,0:8:5.95:6,0,131	0/0:5,0:5:15.04:0,15,252	0/1:7,0:7:0.01:0,0,91	0/1:17,0:17:8.03:8,0,239	0/1:22,0:22:15.06:15,0,350	0/0:13,0:10:9.49:0,9,190	0/1:14,0:14:42.21:42,0,269	0/0:3,0:3:5.97:0,6,59	0/1:3,0:3:36.60:37,0,56	0/1:2,0:2:5.99:6,0,36	1/1:0,1:1:3.01:46,3,0	0/1:8,0:8:15:15,0,109	0/1:7,0:7:2.87:3,0,186	0/0:9,0:9:12.06:0,12,256	0/1:29,0:29:11.32:11,0,417
chr10	93501798	.	T	TGC	301.36	PASS	AB=0.977;AC=20;AF=0.357;AN=56;BaseQRankSum=7.237;DP=708;FS=17.115;HRun=0;HaplotypeScore=121.3149;InbreedingCoeff=-0.2288;MQ=52.24;MQ0=29;MQRankSum=-0.620;QD=0.59;ReadPosRankSum=5.984;VQSLOD=0.8972;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:2.45:0,2,23	0/1:10,0:10:17.97:43,0,18	0/1:22,0:5:1.49:1,0,17	0/0:34,0:9:13.31:0,13,88	0/0:15,0:15:5.67:0,6,61	0/1:21,0:21:7.80:9,0,8	0/1:43,0:41:10.51:11,0,34	0/0:26,0:25:50.29:0,50,366	0/1:39,0:38:20.31:20,0,66	0/1:25,0:25:7.61:8,0,196	0/1:11,0:10:0:0,0,0	0/1:52,0:50:26.47:26,0,32	0/1:23,0:22:8.19:70,0,8	0/1:34,0:34:12.55:13,0,66	0/1:5,12:18:4.79:90,0,5	1/1:22,0:22:18.92:63,19,0	0/0:20,0:17:7.76:0,8,41	0/1:32,0:32:38.26:44,0,38	0/1:9,0:9:1.37:1,0,92	0/1:12,0:12:3.25:3,0,37	0/1:74,0:69:11.38:11,0,211	0/0:13,0:12:2.80:0,3,26	0/0:12,0:12:5.46:0,5,83	0/1:34,0:34:0.40:0,0,38	0/1:17,0:17:1.52:2,0,71	0/0:30,0:28:32.71:0,33,398	0/1:11,0:11:14.47:24,0,14	0/0:12,0:9:0:0,0,0
chr10	93501800	.	T	TGTGTGC	4162.05	PASS	AB=0.678;AC=33;AF=0.589;AN=56;BaseQRankSum=-3.001;DP=743;FS=5.344;HRun=0;HaplotypeScore=139.1139;InbreedingCoeff=-0.1900;MQ=53.47;MQ0=28;MQRankSum=0.820;QD=6.30;ReadPosRankSum=1.629;VQSLOD=2.4048;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:36:3.01:38,3,0	0/1:9,0:9:55.93:56,0,64	0/1:17,0:6:5.45:5,0,17	0/0:29,0:9:7.21:0,7,50	0/0:4,0:18:1.93:0,2,51	1/1:2,18:22:5.55:100,6,0	0/1:4,31:51:2.35:231,0,2	1/1:27,0:26:33.38:299,33,0	0/1:11,0:38:99:145,0,122	0/1:8,0:25:12.54:340,0,13	0/1:0,0:10:0:0,0,0	1/1:9,36:53:17.35:454,17,0	0/1:6,11:24:5.87:288,0,6	0/1:9,24:36:77.79:221,0,78	0/1:18,0:18:18.93:19,0,61	1/1:1,0:22:17.33:214,17,0	1/1:20,0:17:14.92:231,15,0	1/1:5,0:33:5.42:351,5,0	1/1:4,0:13:21.94:167,22,0	0/1:2,0:13:36.52:44,0,37	0/1:20,0:72:99:143,0,216	0/0:4,9:16:2.67:0,3,22	0/1:11,0:11:58.39:142,0,58	1/1:6,24:37:2.49:108,2,0	0/1:5,0:16:66.33:111,0,66	0/1:7,0:27:99:316,0,145	0/1:2,0:11:11.79:139,0,12	0/0:3,0:9:0:0,0,0
chr10	93501809	.	G	GCA	887.79	PASS	AB=0.997;AC=20;AF=0.357;AN=56;BaseQRankSum=7.827;DP=733;FS=12.561;HRun=0;HaplotypeScore=119.6193;InbreedingCoeff=-0.3731;MQ=53.41;MQ0=27;MQRankSum=-0.243;QD=1.68;ReadPosRankSum=7.193;VQSLOD=0.1502;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:5.96:0,6,45	0/0:9,0:9:3.78:0,4,53	0/0:31,0:6:12.34:0,12,71	0/0:48,0:11:20.04:0,20,136	0/0:17,0:17:9.86:0,10,83	0/1:17,0:17:0.17:0,0,20	0/1:46,0:45:52.32:84,0,52	0/0:31,0:30:2.47:0,2,200	0/1:34,0:34:79.34:79,0,119	0/1:20,1:21:45.54:136,0,46	0/0:11,0:10:8.78:0,9,67	0/1:50,0:48:62.19:74,0,62	0/1:23,0:22:56.39:56,0,57	0/1:35,0:35:5.13:5,0,239	0/1:17,0:17:48.58:49,0,65	0/1:21,0:21:60.17:147,0,60	1/1:4,17:20:8.97:107,9,0	0/1:34,0:34:15.52:104,0,16	0/1:16,0:15:19.24:19,0,125	0/1:15,0:15:11.06:11,0,57	0/1:73,0:69:45.40:45,0,256	0/0:16,0:16:11.12:0,11,96	0/0:13,0:13:18.41:0,18,130	0/1:35,0:35:17.25:17,0,18	0/1:18,0:18:18.78:19,0,55	0/1:26,0:25:21.43:21,0,145	0/1:15,0:15:63.51:64,0,65	0/1:9,0:9:0:0,0,0
chr10	93502170	.	G	GT	1485.66	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-2.132;DP=539;FS=0.000;HRun=8;HaplotypeScore=56.3332;InbreedingCoeff=0.9884;MQ=71.72;MQ0=1;MQRankSum=-0.688;QD=26.53;ReadPosRankSum=1.743;VQSLOD=4.2892;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,987	1/1:2,6:8:18.05:208,18,0	0/0:16,0:15:14.70:0,15,173	0/0:10,0:10:23.84:0,24,190	0/0:24,0:24:57.01:0,57,517	0/0:16,0:16:45.01:0,45,407	0/0:21,0:21:54.02:0,54,494	0/0:26,0:26:51.01:0,51,466	0/0:13,0:13:30.01:0,30,274	0/0:24,0:24:66.03:0,66,604	0/0:17,0:17:39:0,39,352	0/0:19,0:19:42:0,42,380	0/0:8,0:8:24.01:0,24,219	0/0:12,0:12:36.02:0,36,329	1/1:1,23:24:63.19:727,63,0	0/0:25,0:25:69.03:0,69,631	1/1:3,21:24:60.18:692,60,0	0/0:22,0:22:24.63:0,25,413	0/0:19,0:19:48.02:0,48,439	0/0:14,0:14:41.77:0,42,369	0/0:33,0:33:83.99:0,84,757	0/0:14,0:14:38.85:0,39,339	0/0:18,0:18:42.01:0,42,383	0/0:22,0:22:60.03:0,60,549	0/0:24,0:24:60.03:0,60,549	0/0:21,0:21:54.01:0,54,489	0/0:15,0:15:42:0,42,379	0/0:13,0:13:30.01:0,30,275
chr10	93504165	.	TA	T	626.71	PASS	AB=0.700;AC=16;AF=0.286;AN=56;BaseQRankSum=-0.775;DP=312;FS=0.604;HRun=16;HaplotypeScore=35.0188;InbreedingCoeff=0.3472;MQ=49.93;MQ0=32;MQRankSum=-0.661;QD=4.54;ReadPosRankSum=5.035;VQSLOD=-0.0185;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,19:28:28.24:245,28,0	0/0:1,0:3:6.15:0,6,30	0/0:8,0:3:2.07:0,2,23	0/0:4,0:3:4.44:0,4,15	0/0:4,0:13:25.99:0,26,148	0/1:2,7:10:9.25:50,0,9	0/1:4,4:7:16.31:27,0,16	0/0:15,0:13:20.28:0,20,124	0/0:1,0:4:8.99:0,9,44	0/0:7,0:15:31.99:0,32,196	0/0:10,0:16:30.12:0,30,197	1/1:4,4:7:11.70:72,12,0	1/1:3,4:7:13.79:78,14,0	0/1:1,3:4:9.20:27,0,9	0/0:4,0:3:2.84:0,3,14	0/0:4,0:6:8.98:0,9,72	0/1:14,13:23:29.36:175,0,29	0/0:1,0:9:14.20:0,14,71	0/1:17,2:12:5.40:5,0,148	0/1:4,1:4:9.02:9,0,41	0/0:6,0:4:11.86:0,12,83	0/0:1,0:1:0:0,0,0	1/1:4,2:6:5.85:36,6,0	1/1:2,4:6:11.74:72,12,0	0/0:7,0:15:29.03:0,29,186	0/0:12,1:12:2.91:0,3,126	0/0:13,0:14:8.82:0,9,151	0/0:7,0:11:17.57:0,18,116
chr10	93505105	.	GA	G	2458.07	PASS	AB=0.692;AC=21;AF=0.389;AN=54;BaseQRankSum=-2.301;DP=526;FS=4.496;HRun=13;HaplotypeScore=89.0961;InbreedingCoeff=0.5550;MQ=74.62;MQ0=0;MQRankSum=1.493;QD=9.56;ReadPosRankSum=3.697;VQSLOD=3.3285;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:20:26.44:77,26,0	1/1:3,7:12:1.75:157,2,0	0/0:26,0:19:24.29:0,24,197	0/0:16,0:14:5.67:0,6,67	1/1:8,19:29:31.51:376,32,0	0/0:10,0:17:35.41:0,35,196	0/0:7,0:22:37.16:0,37,196	0/0:16,0:17:23.87:0,24,218	1/1:9,7:18:12.03:202,12,0	1/1:13,17:31:35.46:411,35,0	1/1:4,11:16:14.58:258,15,0	0/0:12,0:17:45.64:0,46,270	0/0:8,0:14:28.15:0,28,153	0/0:9,0:17:33.72:0,34,168	0/1:6,15:22:31.85:274,0,32	1/1:6,9:16:31.83:225,32,0	1/1:6,0:28:42.76:125,43,0	0/1:6,12:19:11.60:243,0,12	0/1:17,3:20:32.61:33,0,191	0/0:24,0:26:8.67:0,9,402	0/1:4,1:5:6.89:7,0,98	0/0:3,0:16:39.92:0,40,210	0/0:6,0:18:44.47:0,44,253	0/0:6,0:22:56.93:0,57,301	0/1:6,13:21:11.58:264,0,12	0/0:15,0:17:35.89:0,36,335	0/0:20,2:22:6.91:0,7,363	./.
chr10	93505177	.	GC	G	7832.28	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=4.829;DP=493;FS=4.351;HRun=9;HaplotypeScore=70.4460;InbreedingCoeff=0.9286;MQ=80.09;MQ0=0;MQRankSum=-2.376;QD=19.48;ReadPosRankSum=3.094;VQSLOD=5.4963;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,17:27:59.99:540,60,0	1/1:3,9:12:24:215,24,0	0/0:18,0:16:23.37:0,23,277	0/1:20,0:19:1.31:1,0,206	1/1:6,15:21:48:434,48,0	1/1:1,16:17:48.03:438,48,0	1/1:1,25:26:54.03:494,54,0	1/1:7,14:21:38.95:344,39,0	1/1:4,10:14:23.99:219,24,0	1/1:3,18:21:54.02:493,54,0	1/1:1,13:14:30.01:273,30,0	1/1:3,19:22:45.01:412,45,0	1/1:1,11:12:29.99:270,30,0	1/1:1,18:19:54.03:494,54,0	1/1:1,17:18:42.02:384,42,0	1/1:1,12:13:36.02:329,36,0	1/1:3,31:34:87.02:791,87,0	1/1:1,16:17:39.02:357,39,0	0/0:16,0:16:39.10:0,39,433	0/0:9,0:9:18.05:0,18,207	0/0:12,0:12:36.10:0,36,407	1/1:4,9:13:29.91:263,30,0	1/1:1,10:12:29.05:253,29,0	1/1:8,18:26:48.01:439,48,0	1/1:5,12:17:11.52:277,12,0	0/0:12,0:12:33.09:0,33,371	0/0:24,0:23:61.53:0,62,689	1/1:0,6:6:12.01:110,12,0
chr10	93505942	.	T	TGTG	10059.64	PASS	AB=1.000;AC=55;AF=0.982;AN=56;BaseQRankSum=-3.396;DP=379;FS=6.162;HRun=0;HaplotypeScore=383.6485;InbreedingCoeff=-0.0267;MQ=47.84;MQ0=0;MQRankSum=0.633;QD=26.54;ReadPosRankSum=-2.333;VQSLOD=3.7045;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:25.97:235,26,0	1/1:9,0:9:20.90:241,21,0	1/1:3,0:3:9.03:119,9,0	0/1:4,0:4:4.17:121,0,4	1/1:8,0:8:3.01:60,3,0	1/1:16,0:16:33.48:422,33,0	1/1:23,0:23:42.82:634,43,0	1/1:14,0:14:24.08:338,24,0	1/1:14,0:14:38.95:428,39,0	1/1:8,0:8:24.04:312,24,0	1/1:7,0:7:10.85:139,11,0	1/1:21,1:22:59.12:608,59,0	1/1:13,1:14:13.63:340,14,0	1/1:16,0:16:41.22:497,41,0	1/1:22,0:22:55.35:671,55,0	1/1:14,0:14:40.92:503,41,0	1/1:11,1:12:20.33:271,20,0	1/1:13,0:13:23.77:305,24,0	1/1:10,0:10:24.08:365,24,0	1/1:13,0:13:30.10:433,30,0	1/1:37,0:37:57.45:808,57,0	1/1:9,0:9:20.02:282,20,0	1/1:9,0:9:15.86:212,16,0	1/1:12,0:12:14.69:175,15,0	1/1:15,1:16:30.10:425,30,0	1/1:21,1:22:39.50:592,39,0	1/1:14,0:14:30.65:375,31,0	1/1:4,0:4:11.80:148,12,0
chr10	93506787	.	G	GAA	993.74	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=1.346;DP=626;FS=6.210;HRun=12;HaplotypeScore=84.3612;InbreedingCoeff=0.7023;MQ=59.66;MQ0=6;MQRankSum=-1.709;QD=11.29;ReadPosRankSum=1.640;VQSLOD=2.2763;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,31:42:56.12:684,56,0	0/0:5,0:5:8.97:0,9,83	0/1:12,0:10:12.75:13,0,72	0/0:12,0:5:9.73:0,10,51	0/0:18,0:21:13.75:0,14,272	0/0:18,0:19:33.37:0,33,339	0/0:19,0:20:35.67:0,36,317	0/0:34,0:35:26.43:0,26,442	0/0:20,0:24:28.99:0,29,385	0/0:29,0:29:65.56:0,66,589	0/0:17,0:18:29.67:0,30,324	0/0:25,0:26:56.72:0,57,511	0/0:24,0:26:53.63:0,54,522	0/0:24,0:25:56.69:0,57,500	0/0:16,0:16:39:0,39,360	0/0:10,0:11:6.16:0,6,210	1/1:5,22:32:35.09:425,35,0	0/0:28,0:29:56.63:0,57,494	0/0:21,0:20:47.54:0,48,411	0/0:28,0:28:63.38:0,63,561	0/0:17,0:18:47.77:0,48,427	0/0:8,0:8:21:0,21,194	0/0:16,0:19:41.43:0,41,357	0/0:22,0:23:50.58:0,51,438	0/0:30,0:32:62.57:0,63,613	0/0:33,0:34:68.42:0,68,679	0/0:24,0:26:48.23:0,48,538	0/0:8,0:10:11.81:0,12,157
chr10	93510302	.	C	CT	6099.06	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=-2.095;DP=277;FS=9.027;HRun=8;HaplotypeScore=59.6535;InbreedingCoeff=0.6009;MQ=65.55;MQ0=0;MQRankSum=-2.436;QD=24.30;ReadPosRankSum=0.835;VQSLOD=5.4138;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:42.09:471,42,0	1/1:3,6:9:15.04:173,15,0	0/0:11,0:7:2.86:0,3,27	0/0:14,0:9:17.74:0,18,165	1/1:4,9:13:22.16:274,22,0	1/1:7,6:13:26.62:252,27,0	1/1:2,6:8:17.42:181,17,0	1/1:4,19:23:53.92:651,54,0	1/1:4,5:9:12.04:139,12,0	1/1:1,12:13:33.06:365,33,0	1/1:7,9:16:40.25:397,40,0	1/1:0,3:3:9.03:104,9,0	1/1:2,3:5:6.27:99,6,0	1/1:2,3:5:12.30:118,12,0	1/1:1,4:5:15.03:164,15,0	1/1:7,1:8:17.97:177,18,0	1/1:3,11:14:29.88:310,30,0	1/1:3,12:15:27.08:310,27,0	1/1:2,11:13:28.90:315,29,0	1/1:2,6:8:18.05:208,18,0	1/1:1,4:5:6.02:69,6,0	./.	1/1:0,1:1:3.01:35,3,0	1/1:1,0:1:3.01:34,3,0	1/1:4,10:14:10.91:343,11,0	1/1:2,12:14:37.66:419,38,0	1/1:3,3:6:18.02:193,18,0	1/1:6,8:14:27.05:298,27,0
chr10	93513478	.	G	GA	3205.71	PASS	AB=0.970;AC=19;AF=0.339;AN=56;BaseQRankSum=-8.812;DP=556;FS=0.819;HRun=11;HaplotypeScore=63.4868;InbreedingCoeff=0.7859;MQ=68.13;MQ0=0;MQRankSum=2.061;QD=15.95;ReadPosRankSum=1.347;VQSLOD=4.4779;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:39:94.51:0,95,713	0/0:1,0:1:2.99:0,3,23	0/1:11,0:11:3.42:3,0,106	0/0:12,0:13:14.84:0,15,90	0/0:13,0:14:8.77:0,9,126	1/1:3,9:12:15.03:152,15,0	1/1:3,24:28:71.98:715,72,0	0/0:25,0:26:43.80:0,44,329	0/0:20,0:20:41.73:0,42,319	0/0:23,1:25:14.35:0,14,251	0/1:11,0:11:1.30:1,0,136	1/1:5,6:11:21.04:213,21,0	1/1:7,14:22:24.72:416,25,0	1/1:6,21:27:45.09:457,45,0	0/0:27,0:29:63.75:0,64,470	0/0:19,1:21:10.43:0,10,254	0/0:23,0:23:47.79:0,48,371	0/0:17,0:17:47.82:0,48,371	0/0:22,0:22:53.74:0,54,416	0/0:16,0:16:32.80:0,33,252	0/0:16,0:16:32.79:0,33,245	1/1:2,16:18:45.44:433,45,0	1/1:5,16:21:12.83:310,13,0	1/1:1,28:29:69.14:700,69,0	0/0:25,0:25:65.73:0,66,511	0/0:23,0:23:50.71:0,51,388	0/0:23,0:25:57.81:0,58,427	0/1:9,1:10:3.58:4,0,154
chr10	93513569	.	TTA	T	1873.31	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.329;DP=500;FS=40.828;HRun=0;HaplotypeScore=68.9165;InbreedingCoeff=0.9925;MQ=93.91;MQ0=0;MQRankSum=-7.403;QD=33.45;ReadPosRankSum=3.072;VQSLOD=2.4439;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:54.18:876,54,0	0/0:7,0:7:21.07:0,21,394	0/0:23,0:22:66.21:0,66,1242	0/0:27,0:28:77.67:0,78,1454	0/0:20,0:20:48.16:0,48,974	0/0:20,0:20:54.18:0,54,1057	0/0:25,0:25:66.20:0,66,1300	0/0:23,0:23:69.24:0,69,1386	0/0:12,0:12:27.09:0,27,538	0/0:17,0:17:51.18:0,51,1036	0/0:19,0:19:48.16:0,48,974	0/0:21,0:21:54.18:0,54,1063	0/0:11,0:11:30.09:0,30,572	0/0:23,0:23:60.21:0,60,1195	0/0:15,0:15:45.15:0,45,890	0/0:16,0:16:45.15:0,45,913	1/1:0,31:31:69.24:1119,69,0	0/0:21,0:19:48.13:0,48,887	0/0:23,0:23:69.19:0,69,1327	0/0:12,0:12:36.12:0,36,710	0/0:13,0:13:33.11:0,33,670	0/0:14,0:14:42.10:0,42,777	0/0:17,0:17:45.15:0,45,891	0/0:13,0:13:33.11:0,33,669	0/0:11,0:11:33.11:0,33,669	0/0:19,0:19:54.17:0,54,1062	0/0:15,0:15:42.13:0,42,816	0/0:6,0:6:18.06:0,18,366
chr10	93513810	.	A	AT	265.64	PASS	AB=1.000;AC=23;AF=0.821;AN=28;BaseQRankSum=-2.451;DP=33;FS=8.059;HRun=1;HaplotypeScore=17.0044;InbreedingCoeff=0.1372;MQ=122.53;MQ0=3;MQRankSum=-1.976;QD=12.07;ReadPosRankSum=-0.184;VQSLOD=1.1683;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,1:2:3.83:20,4,0	./.	0/0:6,0:6:12.55:0,13,65	0/1:3,0:3:18.06:18,0,26	./.	./.	1/1:0,1:1:3.01:40,3,0	1/1:2,0:2:3.47:27,3,0	1/1:1,0:1:2.94:18,3,0	1/1:0,1:1:3.01:38,3,0	./.	./.	1/1:0,3:3:2.96:19,3,0	./.	./.	1/1:2,0:2:1.23:16,1,0	./.	./.	0/0:4,0:1:0.89:0,1,2	./.	1/1:0,1:1:3.01:40,3,0	./.	./.	./.	./.	1/1:0,2:2:6:62,6,0	1/1:2,0:2:2.94:18,3,0	1/1:2,0:2:5.98:47,6,0
chr10	93514724	.	G	GCTTAAGTTCTATGATACACACAAG	40303.61	PASS	AB=0.969;AC=50;AF=0.926;AN=54;BaseQRankSum=-6.789;DP=293;FS=5.682;HRun=0;HaplotypeScore=333.4985;InbreedingCoeff=-0.0953;MQ=76.64;MQ0=0;MQRankSum=0.015;QD=137.55;ReadPosRankSum=0.035;VQSLOD=3.6116;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:30.02:2159,30,0	1/1:5,0:5:15.02:528,15,0	1/1:6,1:5:24.08:1864,24,0	0/1:12,1:6:11.67:1723,0,12	1/1:27,0:27:42.76:3223,43,0	1/1:18,0:18:27.50:2581,27,0	1/1:9,0:9:27.01:818,27,0	1/1:10,0:10:27.05:774,27,0	1/1:12,0:12:30.03:1915,30,0	1/1:15,0:15:42.03:2663,42,0	1/1:11,0:11:18.84:1434,19,0	0/1:12,0:12:13.62:1533,0,14	1/1:10,0:10:30.07:1401,30,0	1/1:10,0:10:0.58:1112,1,0	0/1:12,0:12:4.25:1512,0,4	1/1:14,0:14:8.49:2006,8,0	1/1:6,0:6:18.03:1172,18,0	./.	1/1:3,0:3:3.01:48,3,0	1/1:8,0:8:3.71:1127,4,0	1/1:8,0:8:20.99:969,21,0	1/1:9,0:9:19.83:2106,20,0	1/1:14,0:14:21.42:1263,21,0	1/1:4,0:4:8.99:603,9,0	1/1:7,0:7:18.02:634,18,0	1/1:19,0:19:48.15:3112,48,0	0/1:10,0:10:2.02:1173,0,2	1/1:6,0:6:18.06:850,18,0
chr10	93515510	.	AGAGAG	A	613.90	PASS	AB=0.828;AC=12;AF=0.231;AN=52;BaseQRankSum=3.556;DP=372;FS=2.078;HRun=0;HaplotypeScore=66.0951;InbreedingCoeff=-0.2295;MQ=55.52;MQ0=40;MQRankSum=-3.682;QD=5.74;ReadPosRankSum=-0.068;VQSLOD=1.7656;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:16:1.12:1,0,569	0/0:1,0:1:2.92:0,3,17	0/0:87,0:12:27.96:0,28,333	0/0:93,0:23:3.89:0,4,248	0/0:11,1:12:15.69:0,16,288	0/1:4,4:8:11.32:229,0,11	0/1:3,1:3:49.01:49,0,50	0/0:11,0:6:12.04:0,12,219	0/1:4,1:5:25.48:25,0,167	0/0:8,0:4:11.78:0,12,226	0/0:9,0:8:4.89:0,5,93	0/1:9,2:10:31.87:152,0,32	0/0:4,0:3:8.32:0,8,78	0/1:3,2:5:7.72:105,0,8	0/0:7,0:4:11.33:0,11,55	0/0:5,0:3:5.71:0,6,35	0/1:17,0:17:2.29:2,0,338	0/1:13,0:10:55.98:56,0,197	0/0:11,0:6:15.04:0,15,270	0/0:9,0:8:15.61:0,16,421	./.	0/0:1,0:1:3.01:0,3,51	0/1:5,1:4:10.56:50,0,11	0/1:2,1:2:2.60:51,0,3	0/0:2,0:2:5.93:0,6,71	0/1:8,0:8:14.97:15,0,273	0/1:2,6:8:10.90:11,0,121	./.
chr10	93515618	.	AC	A	1004.13	PASS	AB=1.000;AC=43;AF=0.796;AN=54;BaseQRankSum=-0.450;DP=237;FS=9.256;HRun=1;HaplotypeScore=36.3262;InbreedingCoeff=0.1580;MQ=45.35;MQ0=28;MQRankSum=-2.040;QD=7.67;ReadPosRankSum=1.652;VQSLOD=0.2352;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:13.46:75,13,0	1/1:0,1:1:3:27,3,0	0/0:46,1:5:5.26:0,5,38	0/0:45,2:10:6.43:0,6,26	1/1:1,0:1:2.94:18,3,0	0/1:9,0:9:25.01:45,0,25	0/0:4,0:3:2.84:0,3,14	1/1:4,1:5:8.66:51,9,0	1/1:4,0:4:2.97:20,3,0	1/1:8,0:4:11.86:83,12,0	1/1:4,0:4:5.74:38,6,0	1/1:2,0:2:2.22:7,2,0	1/1:4,0:4:6.87:31,7,0	1/1:1,0:1:2.97:20,3,0	1/1:5,0:5:11.91:96,12,0	1/1:2,0:2:5.85:36,6,0	1/1:11,0:8:11.53:67,12,0	1/1:8,0:7:17.65:120,18,0	0/1:17,0:9:20.38:51,0,20	1/1:3,0:4:3.45:36,3,0	./.	1/1:1,0:1:2.99:24,3,0	0/1:4,0:4:6.50:7,0,7	0/1:4,0:3:6.34:9,0,6	1/1:7,0:6:16.75:125,17,0	0/1:11,0:8:28.17:28,0,46	1/1:6,0:6:3.72:11,4,0	1/1:4,3:4:12.02:119,12,0
chr10	93515627	.	ACC	A	1294.30	PASS	AB=0.690;AC=46;AF=0.885;AN=52;BaseQRankSum=-2.043;DP=229;FS=2.844;HRun=2;HaplotypeScore=38.8726;InbreedingCoeff=0.2819;MQ=49.65;MQ0=23;MQRankSum=-0.115;QD=10.03;ReadPosRankSum=3.937;VQSLOD=1.0302;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:1.96:6,2,0	1/1:0,1:1:3.01:40,3,0	0/0:49,0:8:14.59:0,15,150	0/0:48,0:10:5.76:0,6,56	1/1:1,0:1:3.01:39,3,0	1/1:9,0:9:24.28:128,24,0	1/1:5,0:4:2.37:8,2,0	1/1:4,1:5:11.73:94,12,0	1/1:3,1:4:2.99:23,3,0	1/1:8,0:6:9.02:51,9,0	0/1:2,2:4:4.60:40,0,5	1/1:2,0:2:2.74:12,3,0	1/1:4,0:4:9.20:53,9,0	./.	1/1:0,4:4:6.02:68,6,0	1/1:1,0:1:2.84:14,3,0	1/1:12,0:9:8.97:75,9,0	1/1:9,0:8:17.79:147,18,0	1/1:15,0:9:22.60:147,23,0	1/1:2,2:4:9.22:66,9,0	./.	1/1:0,0:1:3.01:30,3,0	1/1:4,0:4:2.37:9,2,0	1/1:3,0:2:2.60:10,3,0	1/1:6,2:7:5.64:117,6,0	1/1:10,0:8:17.48:90,17,0	0/1:3,2:5:1.43:29,0,1	1/1:7,0:4:12.01:116,12,0
chr10	93515628	.	CCA	C	1190.78	PASS	AB=1.000;AC=42;AF=0.808;AN=52;BaseQRankSum=-1.387;DP=224;FS=2.105;HRun=0;HaplotypeScore=39.1631;InbreedingCoeff=0.3617;MQ=52.87;MQ0=21;MQRankSum=-0.104;QD=10.01;ReadPosRankSum=3.552;VQSLOD=3.0237;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:6.68:0,7,27	1/1:1,0:1:2.96:19,3,0	0/0:50,0:9:14.89:0,15,180	0/0:47,0:10:16.48:0,16,96	1/1:1,0:1:2.74:12,3,0	1/1:7,2:9:21.44:133,21,0	1/1:5,0:4:2.22:7,2,0	1/1:2,3:5:11.56:105,12,0	1/1:1,3:4:3.01:38,3,0	1/1:6,0:5:5.92:61,6,0	1/1:4,0:4:3.27:42,3,0	0/0:2,0:2:1.55:0,2,4	1/1:2,2:4:10.47:81,10,0	./.	1/1:4,0:4:5.88:36,6,0	1/1:1,0:1:2.92:17,3,0	1/1:12,0:9:8.03:65,8,0	1/1:8,1:8:7.18:131,7,0	1/1:14,0:9:11.50:154,12,0	1/1:4,0:4:8.74:66,9,0	./.	1/1:1,0:1:2.99:24,3,0	1/1:1,1:2:2.50:9,2,0	1/1:3,0:2:2.22:7,2,0	0/1:8,0:7:9.23:110,0,9	1/1:9,1:8:0.68:46,1,0	0/1:5,0:5:3.19:3,0,18	1/1:3,4:4:12.04:162,12,0
chr10	93515629	.	CA	C	645.13	PASS	AB=1.000;AC=34;AF=0.654;AN=52;BaseQRankSum=-1.618;DP=226;FS=0.000;HRun=14;HaplotypeScore=40.5495;InbreedingCoeff=0.3653;MQ=53.01;MQ0=21;MQRankSum=-1.603;QD=5.76;ReadPosRankSum=2.532;VQSLOD=1.3796;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:3.75:0,4,11	0/0:1,0:1:0:0,0,0	0/0:49,0:9:9.86:0,10,83	0/0:48,0:10:7.68:0,8,33	0/0:1,0:1:2.50:0,2,9	1/1:6,3:9:20.77:142,21,0	1/1:2,3:4:2.98:21,3,0	1/1:5,0:5:0.60:28,1,0	1/1:4,0:4:2.96:19,3,0	1/1:6,0:5:2.89:19,3,0	1/1:4,0:4:2.90:19,3,0	0/0:2,0:2:0.89:0,1,2	1/1:3,1:4:8.88:58,9,0	./.	0/0:4,0:4:0:0,0,0	0/0:1,0:1:0:0,0,0	1/1:11,2:10:7.64:31,8,0	1/1:8,1:8:6.60:52,7,0	1/1:6,7:9:17.71:118,18,0	1/1:3,1:4:5.53:30,6,0	./.	1/1:1,0:1:2.97:20,3,0	1/1:2,0:2:2.97:20,3,0	1/1:2,1:2:2.97:20,3,0	0/1:8,0:7:12.71:28,0,13	1/1:7,2:8:11.84:81,12,0	0/1:5,0:5:0.95:1,0,9	1/1:7,0:4:11.53:68,12,0
chr10	93515709	.	AT	A	837.71	PASS	AB=1.000;AC=28;AF=0.538;AN=52;BaseQRankSum=1.475;DP=163;FS=0.000;HRun=1;HaplotypeScore=37.5304;InbreedingCoeff=0.4078;MQ=50.07;MQ0=4;MQRankSum=0.258;QD=7.83;ReadPosRankSum=-2.249;VQSLOD=-0.1699;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:0.40:0,0,31	0/0:2,0:2:0.89:0,1,2	0/1:12,0:5:9.81:10,0,47	0/0:8,0:3:4.69:0,5,33	0/0:6,0:5:7.63:0,8,136	1/1:7,5:13:31.66:254,32,0	1/1:3,3:6:16.83:143,17,0	0/1:22,0:19:9:9,0,475	0/0:2,0:1:3.01:0,3,47	1/1:2,0:2:3:27,3,0	1/1:3,0:3:6.01:60,6,0	./.	1/1:3,3:6:14.87:133,15,0	0/0:4,0:4:8.13:0,8,38	0/1:6,0:6:2.88:4,0,3	0/0:1,0:1:3.01:0,3,48	0/0:17,0:17:23.04:0,23,115	0/0:7,0:7:9.92:0,10,149	1/1:12,0:10:4.75:100,5,0	1/1:2,0:2:2.99:23,3,0	1/1:1,0:1:2.50:9,2,0	./.	1/1:1,5:5:11.51:103,12,0	1/1:0,1:1:2.96:19,3,0	0/1:4,0:3:8.85:9,0,86	1/1:4,0:4:5.74:36,6,0	1/1:7,0:7:8.88:61,9,0	0/0:4,0:3:9.03:0,9,127
chr10	93515712	.	AT	A	1638.38	PASS	AB=1.000;AC=42;AF=0.778;AN=54;BaseQRankSum=-2.411;DP=174;FS=1.017;HRun=1;HaplotypeScore=34.7483;InbreedingCoeff=0.2047;MQ=49.71;MQ0=4;MQRankSum=1.736;QD=10.11;ReadPosRankSum=-2.029;VQSLOD=0.6264;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,3:6:12.43:119,12,0	1/1:2,0:2:2.90:16,3,0	0/1:14,0:6:3:3,0,22	0/1:9,0:4:0.40:0,0,20	0/1:7,0:6:17.07:17,0,56	1/1:10,4:14:37.76:284,38,0	1/1:4,3:7:20.22:169,20,0	0/1:21,0:18:66.53:67,0,187	0/1:3,0:2:12.54:16,0,13	1/1:2,0:2:3:27,3,0	1/1:4,0:4:6.48:60,6,0	1/1:1,0:1:2.96:19,3,0	1/1:4,2:6:15.42:138,15,0	1/1:3,1:4:2.76:38,3,0	1/1:6,0:6:0.22:5,0,0	0/0:1,0:1:3.01:0,3,32	1/1:1,17:18:27.56:368,28,0	0/0:7,0:7:8.94:0,9,65	1/1:12,0:10:13.40:116,13,0	1/1:2,0:2:2.98:22,3,0	1/1:2,0:2:5.84:40,6,0	./.	1/1:4,2:5:11.81:109,12,0	1/1:1,0:1:2.96:19,3,0	0/1:4,0:3:8.89:9,0,44	1/1:4,0:4:5.74:36,6,0	1/1:7,0:7:12.76:87,13,0	0/0:4,0:3:5.93:0,6,49
chr10	93518634	.	C	CT	1349.02	PASS	AB=0.720;AC=16;AF=0.286;AN=56;BaseQRankSum=-4.006;DP=557;FS=1.611;HRun=13;HaplotypeScore=65.8438;InbreedingCoeff=0.7273;MQ=67.63;MQ0=0;MQRankSum=-1.119;QD=8.88;ReadPosRankSum=-0.749;VQSLOD=2.6574;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:26:5.72:0,6,245	0/0:12,0:12:23.69:0,24,162	0/0:12,0:8:5.83:0,6,39	0/0:7,0:6:6.97:0,7,25	0/0:32,3:35:14.46:0,14,380	1/1:7,16:23:24.03:223,24,0	1/1:5,8:13:3.44:174,3,0	0/0:27,0:28:25.63:0,26,199	0/0:15,0:16:25.80:0,26,170	0/0:27,0:27:50.39:0,50,346	0/0:10,1:11:1.41:0,1,155	1/1:2,9:12:20.86:182,21,0	1/1:7,8:16:16.81:265,17,0	0/1:7,15:22:2.56:121,0,3	0/0:20,1:21:16.64:0,17,258	0/0:19,0:19:38.58:0,39,266	0/0:32,0:32:52.33:0,52,363	0/0:19,0:19:35.11:0,35,260	0/1:18,4:22:37.65:38,0,129	0/0:25,1:28:17.25:0,17,249	0/0:17,1:18:10.76:0,11,219	1/1:3,5:8:11.97:103,12,0	1/1:6,11:18:23.98:214,24,0	1/1:4,14:18:24.01:218,24,0	0/0:16,0:16:29.56:0,30,199	0/0:29,2:32:17.14:0,17,367	0/0:28,1:30:28.55:0,29,309	0/0:14,0:16:42.76:0,43,279
chr10	93518928	.	TA	T	674.70	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.740;DP=518;FS=3.890;HRun=3;HaplotypeScore=62.8128;InbreedingCoeff=0.8170;MQ=74.90;MQ0=3;MQRankSum=1.458;QD=14.67;ReadPosRankSum=-1.140;VQSLOD=2.5183;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,5:30:67.84:499,68,0	0/0:5,0:5:15.02:0,15,145	0/0:38,0:20:32.35:0,32,260	0/0:24,0:15:1.95:0,2,83	0/0:28,0:28:57.91:0,58,505	0/0:20,0:20:30.47:0,30,189	0/0:18,0:18:31.53:0,32,241	0/0:34,0:34:56.62:0,57,450	0/0:12,0:12:26.94:0,27,223	0/0:29,0:29:57.56:0,58,512	0/0:18,0:18:20.48:0,20,337	0/0:9,0:9:13.61:0,14,75	0/0:14,0:14:25.59:0,26,196	0/0:15,0:15:19.98:0,20,155	0/0:15,0:15:29.96:0,30,263	0/0:24,0:24:38.50:0,39,343	1/1:15,1:16:37.90:297,38,0	0/0:13,0:13:25.57:0,26,183	0/0:12,0:12:29.93:0,30,257	0/0:17,0:17:38.37:0,38,307	0/0:6,0:6:11.93:0,12,97	0/0:15,0:15:26.89:0,27,219	0/0:14,0:14:23.78:0,24,177	0/0:11,0:11:11.98:0,12,98	0/0:9,0:9:11.81:0,12,100	0/0:17,0:17:43.23:0,43,379	0/0:36,0:36:76.88:0,77,630	0/0:17,0:17:8.56:0,9,222
chr10	93519353	.	T	TAAAAAAA	11570.55	PASS	AB=0.923;AC=44;AF=0.786;AN=56;BaseQRankSum=3.881;DP=465;FS=10.469;HRun=13;HaplotypeScore=148.0011;InbreedingCoeff=0.7442;MQ=61.09;MQ0=1;MQRankSum=-9.603;QD=30.94;ReadPosRankSum=-5.555;VQSLOD=0.3193;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:6.02:181,6,0	1/1:5,1:7:2.86:105,3,0	0/1:11,0:10:4.71:5,0,151	0/1:10,0:7:4.52:5,0,29	1/1:17,0:23:33.26:684,33,0	1/1:12,1:19:36.12:1001,36,0	1/1:7,1:9:15.05:424,15,0	1/1:31,0:31:41.61:1091,42,0	1/1:8,1:9:15.05:410,15,0	1/1:21,2:26:31.88:750,32,0	1/1:18,0:20:29.29:657,29,0	1/1:15,0:16:15.05:460,15,0	1/1:11,2:13:10.85:269,11,0	1/1:16,0:16:24.04:489,24,0	1/1:13,2:19:21.07:552,21,0	1/1:21,3:26:36.12:1022,36,0	1/1:23,0:22:19:515,19,0	1/1:9,0:10:11.99:249,12,0	0/0:11,0:11:29.97:0,30,442	0/0:26,0:26:47.36:0,47,892	0/0:14,0:14:35.59:0,36,603	1/1:9,2:18:35.76:764,36,0	1/1:12,2:16:33.11:944,33,0	1/1:6,1:8:7.27:186,7,0	1/1:13,0:13:27.08:629,27,0	0/0:16,0:17:32.48:0,32,531	0/0:21,0:23:50.57:0,51,878	1/1:8,0:9:6.02:177,6,0
chr10	93519366	.	A	AAAAAACAAAAAC	6357.60	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=10.893;DP=340;FS=15.593;HRun=0;HaplotypeScore=160.2266;InbreedingCoeff=-0.0697;MQ=77.34;MQ0=1;MQRankSum=-12.386;QD=29.71;ReadPosRankSum=0.092;VQSLOD=3.5944;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:7:6.02:323,6,0	0/1:3,0:3:30.80:31,0,38	0/0:15,0:13:32.64:0,33,290	0/0:12,0:8:12.55:0,13,92	0/1:16,0:16:99:259,0,159	0/1:15,0:15:70.39:386,0,70	0/1:10,0:10:99:209,0,103	0/1:20,0:20:99:728,0,181	0/1:5,0:5:9.76:158,0,10	0/1:15,0:15:99:253,0,139	0/1:13,0:13:99:318,0,165	0/1:7,0:7:82.37:242,0,82	1/1:3,0:3:9.03:127,9,0	0/1:12,0:12:42.57:297,0,43	0/1:12,0:12:99:201,0,120	1/1:13,0:13:7.94:527,8,0	1/1:13,1:13:30.01:932,30,0	0/1:6,0:6:28.13:76,0,28	0/0:14,0:14:42.13:0,42,1037	0/0:26,0:26:78.20:0,78,2035	0/0:17,0:17:44.98:0,45,1207	0/1:15,0:15:99:189,0,152	1/1:11,0:11:28.02:589,28,0	0/1:5,0:5:44.75:45,0,86	1/1:10,0:10:2.60:360,3,0	0/0:18,0:18:50.93:0,51,1244	0/0:24,0:24:66.09:0,66,1794	1/1:2,0:2:6.02:109,6,0
chr10	93519924	.	C	CA	1222.38	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.234;DP=730;FS=6.146;HRun=9;HaplotypeScore=74.7775;InbreedingCoeff=0.8970;MQ=77.22;MQ0=0;MQRankSum=0.474;QD=17.72;ReadPosRankSum=1.352;VQSLOD=3.7994;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:39:99:580,100,0	0/0:19,1:20:20.81:0,21,410	0/0:22,0:22:38.01:0,38,307	0/0:19,0:19:11:0,11,230	0/0:31,0:31:74.94:0,75,650	0/0:22,0:22:47.95:0,48,412	0/0:25,2:27:5.61:0,6,506	0/0:20,0:19:35.95:0,36,312	0/0:32,0:33:94.98:0,95,806	0/0:30,0:30:74.95:0,75,647	0/0:30,0:30:83.11:0,83,724	0/0:27,0:27:74.97:0,75,647	0/0:21,1:22:23.78:0,24,433	0/0:22,0:22:56.98:0,57,495	0/0:35,0:35:95.95:0,96,830	0/0:37,0:37:99:0,102,886	1/1:5,25:30:69.19:763,69,0	0/0:15,0:15:41.99:0,42,364	0/0:19,0:19:47.98:0,48,417	0/0:36,2:38:29.59:0,30,711	0/0:19,0:19:50.98:0,51,442	0/0:16,0:16:41.98:0,42,364	0/0:26,0:26:65.98:0,66,573	0/0:28,0:28:65.96:0,66,569	0/0:12,0:12:35.99:0,36,313	0/0:38,2:40:59.04:0,59,837	0/0:37,0:37:92.95:0,93,806	0/0:13,1:14:8.81:0,9,305
chr10	93519933	.	A	AC	1421.21	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-0.258;DP=750;FS=5.162;HRun=1;HaplotypeScore=72.6977;InbreedingCoeff=0.6464;MQ=77.94;MQ0=0;MQRankSum=-4.710;QD=19.47;ReadPosRankSum=3.449;VQSLOD=4.0514;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,42:43:99:1417,102,0	0/0:20,0:20:50.44:0,50,684	0/0:21,0:21:47.84:0,48,484	0/0:21,0:21:22.53:0,23,399	0/0:34,0:34:99:0,102,1178	0/0:21,0:21:60.11:0,60,690	0/0:31,0:31:77.19:0,77,996	0/0:22,0:21:63.06:0,63,686	0/0:34,0:34:99:0,102,1250	0/0:27,0:27:81.24:0,81,1009	0/0:29,0:29:87.27:0,87,1107	0/0:29,0:29:87.22:0,87,1062	0/0:23,0:23:60.16:0,60,747	0/0:23,0:23:69.16:0,69,821	0/0:35,0:35:99:0,102,1287	0/0:39,0:39:99:0,117,1449	0/1:30,0:30:34.93:111,0,35	0/0:15,0:15:45.09:0,45,534	0/0:19,0:19:51.15:0,51,635	0/0:38,0:38:93.61:0,94,1251	0/0:20,0:20:60.14:0,60,715	0/0:20,0:20:60.07:0,60,671	0/0:23,0:23:66.21:0,66,844	0/0:24,0:24:69.17:0,69,859	0/0:13,0:13:39.12:0,39,492	0/0:44,0:44:99:0,121,1476	0/0:38,0:38:99:0,114,1354	0/0:14,0:14:33.30:0,33,496
chr10	93520298	.	GT	G	4948.93	PASS	AB=0.775;AC=22;AF=0.393;AN=56;BaseQRankSum=-5.238;DP=621;FS=5.939;HRun=10;HaplotypeScore=78.7224;InbreedingCoeff=0.8351;MQ=77.06;MQ0=1;MQRankSum=-0.105;QD=17.80;ReadPosRankSum=-0.053;VQSLOD=5.2923;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:23:33.87:0,34,185	0/1:2,9:11:6.22:181,0,6	0/1:28,0:23:10.21:10,0,254	0/0:28,1:25:0.64:0,1,304	1/1:5,27:32:92.54:784,93,0	0/0:3,0:29:51.17:0,51,256	0/0:5,0:19:45.79:0,46,265	1/1:9,32:41:83.92:724,84,0	1/1:6,22:28:56.97:494,57,0	1/1:2,23:25:68.98:599,69,0	1/1:2,11:13:32.99:286,33,0	0/0:2,0:14:31.25:0,31,156	0/0:5,0:25:45.11:0,45,222	0/0:3,0:14:25.57:0,26,127	1/1:4,28:32:62.95:547,63,0	1/1:1,24:25:62.99:547,63,0	0/0:0,0:13:28.65:0,29,144	1/1:1,10:11:23.99:208,24,0	0/0:31,0:31:68.43:0,68,702	0/0:22,0:22:37.32:0,37,624	0/0:16,0:16:36.08:0,36,389	0/0:3,0:13:24.98:0,25,121	0/0:6,0:16:36.40:0,36,213	0/0:2,0:21:42.48:0,42,245	1/1:6,12:18:38.99:338,39,0	0/0:18,0:18:16.11:0,16,397	0/0:39,0:38:99:0,99,1092	1/1:1,12:13:26.97:230,27,0
chr10	93520941	.	T	TTTG	19918.54	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-11.695;DP=654;FS=1.641;HRun=0;HaplotypeScore=85.5245;InbreedingCoeff=0.9884;MQ=67.68;MQ0=0;MQRankSum=-1.520;QD=43.02;ReadPosRankSum=1.564;VQSLOD=6.3980;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,19:29:46.80:1035,47,0	1/1:2,6:8:15.05:310,15,0	0/0:21,0:21:42.14:0,42,601	0/0:20,0:20:30.09:0,30,417	1/1:3,23:26:54.18:1093,54,0	1/1:5,22:27:57.20:1181,57,0	1/1:4,18:22:54.18:1119,54,0	1/1:8,23:32:72.24:1413,72,0	1/1:2,15:17:42.14:846,42,0	1/1:6,20:26:60.21:1233,60,0	1/1:9,15:24:45.15:880,45,0	1/1:5,17:22:51.17:1003,51,0	1/1:7,14:22:42.14:847,42,0	1/1:4,17:21:48.16:972,48,0	1/1:3,25:29:69.24:1429,69,0	1/1:7,22:29:57.20:1181,57,0	1/1:3,20:23:48.16:970,48,0	1/1:7,5:12:15.05:296,15,0	0/0:31,0:31:66.22:0,66,962	0/0:25,0:25:35.20:0,35,814	0/0:34,0:34:78.22:0,78,1119	1/1:6,13:20:39.05:710,39,0	1/1:5,11:17:27.42:533,27,0	1/1:4,25:29:69.14:1378,69,0	1/1:1,21:22:60.21:1243,60,0	0/0:26,0:26:72.24:0,72,1055	0/0:34,0:34:83.83:0,84,1218	1/1:0,5:5:12.04:249,12,0
chr10	93521228	.	AAAAG	A	1983.43	PASS	AB=0.817;AC=16;AF=0.308;AN=52;BaseQRankSum=-6.211;DP=642;FS=12.951;HRun=0;HaplotypeScore=134.6478;InbreedingCoeff=0.7277;MQ=65.62;MQ0=2;MQRankSum=3.156;QD=10.38;ReadPosRankSum=2.766;VQSLOD=2.5072;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:27.06:0,27,389	0/0:8,0:8:15.04:0,15,222	./.	./.	0/0:49,0:49:74.55:0,75,864	1/1:11,9:20:11.82:182,12,0	1/1:11,5:16:9.03:137,9,0	0/0:29,0:28:4.98:0,5,12	0/0:31,0:31:54.04:0,54,724	0/0:26,0:26:12.03:0,12,150	0/0:28,0:28:17.71:0,18,205	1/1:7,9:16:15.05:228,15,0	1/1:16,10:26:18.06:266,18,0	1/1:15,5:21:16.76:253,17,0	0/0:20,0:20:3.01:0,3,49	0/0:30,0:30:11.97:0,12,139	0/1:19,0:19:24.42:24,0,317	0/0:18,0:18:15.01:0,15,197	0/0:10,0:10:14.94:0,15,222	0/0:11,0:28:48.15:0,48,814	0/0:10,0:16:18.04:0,18,285	1/1:15,12:28:33.11:483,33,0	1/1:11,14:26:23.92:347,24,0	0/1:8,11:19:15.95:252,0,16	0/0:27,0:26:12.03:0,12,180	0/0:28,0:36:30.09:0,30,481	0/0:21,0:26:21.04:0,21,288	0/0:15,0:15:38.67:0,39,464
chr10	93521271	.	A	AGAAAGAAAGAAG	7623.05	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-3.116;DP=716;FS=5.308;HRun=0;HaplotypeScore=216.7684;InbreedingCoeff=0.8836;MQ=58.31;MQ0=8;MQRankSum=-5.644;QD=21.41;ReadPosRankSum=0.885;VQSLOD=3.0057;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:42.95:0,43,695	1/1:9,0:9:23.99:345,24,0	0/0:16,0:10:16.02:0,16,233	0/0:16,0:11:16.49:0,16,177	1/1:45,0:45:98.99:1378,99,0	0/0:15,0:15:29.81:0,30,494	0/0:14,0:14:29.97:0,30,402	1/1:46,0:42:97.94:801,98,0	1/1:28,0:28:40.31:658,40,0	1/1:3,14:19:47.79:910,48,0	1/1:2,27:32:31.77:552,32,0	0/0:20,0:20:36:0,36,605	0/0:22,0:22:41.94:0,42,672	0/0:28,0:28:51.96:0,52,787	1/1:5,24:31:3.01:179,3,0	1/1:2,32:37:12.04:448,12,0	0/0:23,0:23:58.11:0,58,938	1/1:20,0:20:50.18:846,50,0	0/0:22,0:18:19.82:0,20,331	0/0:32,0:32:57.28:0,57,507	0/0:16,0:16:37.46:0,37,271	0/0:26,0:26:72:0,72,1243	0/0:37,0:37:89.87:0,90,1239	0/0:20,0:20:38.97:0,39,701	1/1:5,32:40:9.03:537,9,0	0/0:27,0:27:37.44:0,37,407	0/1:29,0:28:99:177,0,428	1/1:19,0:19:51.07:791,51,0
chr10	93521283	.	A	AG	683.67	PASS	AB=0.773;AC=3;AF=0.054;AN=56;BaseQRankSum=4.603;DP=695;FS=2.173;HRun=0;HaplotypeScore=117.1155;InbreedingCoeff=-0.0652;MQ=63.39;MQ0=2;MQRankSum=-3.131;QD=7.60;ReadPosRankSum=-4.436;VQSLOD=2.5761;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:58.50:0,59,822	0/0:10,0:10:22.15:0,22,298	0/0:25,0:19:42.02:0,42,620	0/0:26,0:18:39.75:0,40,493	0/1:33,13:46:99:385,0,1103	0/0:18,0:18:38.95:0,39,442	0/0:17,0:17:45.09:0,45,560	0/0:34,0:33:99:0,99,1356	0/1:16,10:26:99:324,0,551	0/0:14,0:14:38.69:0,39,495	0/0:19,0:19:34.98:0,35,373	0/0:19,0:19:42.06:0,42,499	0/0:24,0:24:56.30:0,56,656	0/0:23,0:23:66.11:0,66,798	0/0:25,0:25:14.51:0,15,144	0/0:31,0:31:3.78:0,4,102	0/0:28,0:28:78.22:0,78,1043	0/0:21,0:21:31.29:0,31,585	0/0:26,0:26:60.18:0,60,902	0/0:35,0:35:59.23:0,59,802	0/0:13,0:13:24.08:0,24,336	0/0:29,0:29:87.10:0,87,1019	0/0:38,0:38:99:0,99,1236	0/0:21,0:21:45.05:0,45,522	0/0:31,0:30:16.62:0,17,152	0/0:22,0:22:11.51:0,12,563	0/0:31,0:30:79.70:0,80,1079	0/1:14,4:18:74.55:75,0,507
chr10	93522602	.	GAAA	G	3880.49	PASS	AB=0.903;AC=36;AF=0.643;AN=56;BaseQRankSum=-9.779;DP=504;FS=1.579;HRun=16;HaplotypeScore=88.7391;InbreedingCoeff=0.7165;MQ=54.38;MQ0=12;MQRankSum=2.369;QD=12.85;ReadPosRankSum=2.641;VQSLOD=1.5665;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:92.81:0,93,866	1/1:3,8:11:27.04:284,27,0	0/0:18,0:4:5.95:0,6,48	0/0:12,0:3:0:0,0,0	1/1:3,26:30:53.06:532,53,0	1/1:4,11:16:17.83:220,18,0	1/1:3,7:10:12.01:129,12,0	0/0:12,0:32:38.73:0,39,221	1/1:1,10:12:23.98:243,24,0	1/1:5,13:20:29.66:402,30,0	1/1:9,13:21:43.83:429,44,0	1/1:2,4:7:11.96:113,12,0	1/1:3,8:12:11.90:114,12,0	1/1:8,8:17:5.40:140,5,0	1/1:2,11:14:20.98:211,21,0	1/1:3,8:13:19.12:207,19,0	0/0:31,1:32:46.73:0,47,689	1/1:6,10:17:10.89:116,11,0	0/1:22,0:27:99:111,0,108	0/0:4,0:14:19.64:0,20,95	0/1:5,0:5:1.04:1,0,5	1/1:5,5:11:23.70:222,24,0	1/1:5,12:15:11.21:106,11,0	1/1:2,7:8:4.76:91,5,0	1/1:9,15:24:17.34:207,17,0	0/0:7,0:17:2.74:0,3,52	0/0:6,0:22:14.54:0,15,35	0/0:6,0:10:3.37:0,3,9
chr10	93522616	.	AAAG	A	885.37	PASS	AB=0.988;AC=23;AF=0.411;AN=56;BaseQRankSum=5.470;DP=537;FS=1.298;HRun=0;HaplotypeScore=102.1618;InbreedingCoeff=-0.4082;MQ=58.55;MQ0=11;MQRankSum=-1.899;QD=2.33;ReadPosRankSum=6.746;VQSLOD=1.2706;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:37:15.68:16,0,297	1/1:10,0:10:0.03:64,0,0	0/0:29,0:6:4.46:0,4,51	0/0:21,0:7:1.84:0,2,16	0/1:36,0:35:99:137,0,127	0/1:17,0:17:23.12:23,0,69	0/1:12,0:12:24.28:24,0,74	0/0:31,0:31:53.65:0,54,416	0/1:13,0:13:1.83:52,0,2	0/1:21,0:20:45.82:80,0,46	0/1:22,1:21:37.45:135,0,37	0/1:9,0:9:24.84:25,0,53	0/1:10,0:10:9.35:63,0,9	0/1:17,2:17:41.78:84,0,42	1/1:12,0:12:15.09:67,15,0	0/1:12,0:12:8.44:69,0,8	0/0:31,0:29:1.71:0,2,188	0/1:16,0:16:9.48:30,0,9	0/1:32,0:30:7:7,0,183	0/0:16,0:16:43.09:0,43,287	0/1:6,0:6:27.81:28,0,34	0/1:9,1:10:15.69:66,0,16	0/1:19,0:17:1.18:1,0,88	0/1:10,0:9:18.16:41,0,18	0/1:28,0:26:20.37:20,0,153	0/0:18,0:18:21.18:0,21,148	0/1:27,0:27:3.17:3,0,117	0/0:11,0:10:1.48:0,1,75
chr10	93522618	.	AG	A	671.66	PASS	AB=0.997;AC=13;AF=0.232;AN=56;BaseQRankSum=1.947;DP=543;FS=8.162;HRun=1;HaplotypeScore=88.2241;InbreedingCoeff=0.0908;MQ=59.80;MQ0=11;MQRankSum=-2.051;QD=2.90;ReadPosRankSum=0.826;VQSLOD=-0.6210;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,5:36:41.09:368,41,0	0/0:10,0:10:25:0,25,113	0/1:32,0:8:17.43:17,0,57	0/0:21,0:7:1.61:0,2,16	0/0:37,0:36:55.99:0,56,367	0/0:18,0:18:36.67:0,37,219	0/0:12,0:12:20.30:0,20,129	0/0:32,0:32:31.39:0,31,386	0/0:15,0:15:28.37:0,28,149	0/0:20,0:19:11.70:0,12,181	0/0:21,1:20:13.26:0,13,156	0/0:9,0:9:16.70:0,17,100	0/1:10,0:10:0.66:1,0,20	0/1:19,0:17:22.18:22,0,64	0/0:12,0:12:13.79:0,14,66	0/0:13,0:13:4.49:0,4,73	1/1:31,1:30:45.73:296,46,0	0/1:17,0:17:8.92:9,0,55	0/1:30,1:29:43.42:43,0,261	0/0:16,0:16:22.22:0,22,183	0/1:6,0:6:34.49:35,0,34	0/0:10,0:10:7.59:0,8,91	0/0:19,0:17:25.53:0,26,155	0/1:10,0:9:9.55:10,0,32	0/0:27,0:26:40.62:0,41,273	0/0:18,0:18:3.69:0,4,117	0/1:26,0:26:21.53:22,0,124	0/1:12,0:11:1.65:2,0,85
chr10	93522619	.	G	GA	1041.86	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.815;DP=549;FS=12.738;HRun=16;HaplotypeScore=89.9295;InbreedingCoeff=0.6128;MQ=60.70;MQ0=11;MQRankSum=-2.066;QD=7.39;ReadPosRankSum=1.573;VQSLOD=1.4895;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:35,2:36:73.86:707,74,0	0/0:10,0:10:30.01:0,30,267	0/1:33,0:9:0.14:0,0,60	0/1:21,0:7:1.75:2,0,44	0/0:37,0:36:92.75:0,93,798	0/0:18,0:18:39.02:0,39,353	0/0:13,0:13:24:0,24,214	0/0:32,0:32:77.92:0,78,693	0/0:15,0:15:32.99:0,33,289	0/0:21,0:20:44.81:0,45,392	0/0:22,0:20:50.75:0,51,432	0/0:9,0:9:21:0,21,185	0/0:10,0:10:14.89:0,15,115	0/0:19,0:17:28.84:0,29,226	0/0:12,0:12:20.98:0,21,183	0/0:14,0:14:26.86:0,27,231	1/1:29,4:31:20.50:452,20,0	0/1:17,0:17:4.80:5,0,136	0/0:31,0:29:67.13:0,67,575	0/0:16,0:16:38.86:0,39,335	0/0:6,0:6:8.86:0,9,80	0/0:10,0:10:26.74:0,27,224	0/0:18,0:16:26.93:0,27,243	0/0:10,0:9:14.04:0,14,111	0/0:28,0:27:50.96:0,51,452	0/0:18,0:18:44.22:0,44,370	0/0:27,0:27:50.18:0,50,407	0/0:12,0:11:17.38:0,17,144
chr10	93523176	.	AT	A	3768.46	PASS	AB=0.626;AC=45;AF=0.804;AN=56;BaseQRankSum=4.215;DP=535;FS=0.000;HRun=15;HaplotypeScore=65.1136;InbreedingCoeff=0.6696;MQ=72.73;MQ0=5;MQRankSum=-0.685;QD=8.97;ReadPosRankSum=2.932;VQSLOD=3.0005;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,3:35:30.67:0,31,592	1/1:2,4:7:13.85:83,14,0	0/0:35,0:20:11.46:0,11,122	0/0:20,0:9:8.70:0,9,52	1/1:5,14:19:14.99:223,15,0	1/1:4,8:12:14.75:96,15,0	1/1:3,13:16:35.46:231,35,0	1/1:7,23:30:58.95:383,59,0	1/1:4,15:19:9.13:185,9,0	1/1:4,18:24:50.47:315,50,0	0/1:6,14:21:4.93:191,0,5	1/1:1,12:13:17.73:115,18,0	1/1:4,14:20:27.65:165,28,0	1/1:3,9:14:27.66:165,28,0	0/1:6,9:16:1.23:98,0,1	1/1:2,16:19:34.54:217,35,0	0/0:21,3:24:18.24:0,18,392	0/1:9,8:17:1.92:78,0,2	1/1:6,0:19:24.40:71,24,0	1/1:2,0:17:30.70:99,31,0	1/1:1,0:15:18.33:53,18,0	1/1:2,15:17:29.28:187,29,0	1/1:7,14:22:33.93:217,34,0	1/1:3,10:14:2.31:133,2,0	1/1:8,14:24:34.67:207,35,0	1/1:2,0:14:24.42:70,24,0	1/1:0,0:21:30.56:88,31,0	1/1:5,5:10:14.74:96,15,0
chr10	93523881	.	T	TA	4303.93	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-13.505;DP=590;FS=3.932;HRun=7;HaplotypeScore=76.8301;InbreedingCoeff=0.9869;MQ=83.29;MQ0=0;MQRankSum=-1.694;QD=27.59;ReadPosRankSum=4.348;VQSLOD=5.5418;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:43.77:0,44,545	0/0:9,0:9:12:0,12,116	0/0:24,0:24:40:0,40,451	0/0:17,0:16:29.87:0,30,257	0/0:24,0:24:60.08:0,60,574	1/1:3,27:30:72.22:870,72,0	1/1:4,14:18:39.12:471,39,0	0/0:37,0:37:87.08:0,87,829	0/0:19,0:19:45.06:0,45,430	0/0:25,0:25:69.09:0,69,659	0/0:29,0:29:75.11:0,75,724	1/1:2,15:17:45.14:544,45,0	1/1:5,18:23:36.11:435,36,0	1/1:1,14:15:39.12:471,39,0	0/0:20,0:20:51.07:0,51,488	0/0:20,0:20:54.09:0,54,521	0/0:12,0:12:27.04:0,27,261	0/0:12,0:12:13.07:0,13,211	0/0:25,0:25:66.08:0,66,630	0/0:20,0:20:60.08:0,60,574	0/0:15,0:15:45.07:0,45,434	1/1:2,15:17:16.12:462,16,0	1/1:1,26:27:69.21:834,69,0	1/1:1,8:9:18.06:217,18,0	0/0:13,0:13:30.02:0,30,283	0/0:29,0:29:81.11:0,81,777	0/0:44,0:44:99:0,111,1054	0/0:17,0:17:48.08:0,48,463
chr10	93523895	.	T	TA	6899.88	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-15.816;DP=618;FS=5.450;HRun=7;HaplotypeScore=72.0277;InbreedingCoeff=0.9820;MQ=79.45;MQ0=0;MQRankSum=-0.447;QD=28.87;ReadPosRankSum=-1.303;VQSLOD=5.0145;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.06:0,78,742	1/1:1,8:9:21.06:254,21,0	0/0:24,0:23:33.90:0,34,366	0/0:15,0:13:33.05:0,33,315	1/1:3,23:25:66.03:745,66,0	0/0:30,0:30:78.12:0,78,753	0/0:19,0:19:48:0,48,443	1/1:8,29:37:90.21:1032,90,0	1/1:1,19:20:51.16:616,51,0	1/1:5,20:25:60.04:693,60,0	1/1:2,30:32:84.11:964,84,0	0/0:18,0:18:48.01:0,48,439	0/0:18,0:18:45.04:0,45,423	0/0:15,0:15:45.03:0,45,417	1/1:3,16:19:42.13:507,42,0	1/1:3,22:25:63.19:761,63,0	0/0:14,0:14:42.04:0,42,398	1/1:2,12:14:30.56:363,31,0	0/0:27,0:27:72.10:0,72,690	0/0:31,0:31:87.12:0,87,834	0/0:17,0:17:45.05:0,45,430	0/0:18,0:18:51.07:0,51,488	0/0:27,0:27:78.08:0,78,744	0/0:7,0:7:18.03:0,18,174	1/1:1,14:15:36.11:435,36,0	0/0:29,2:31:5.62:0,6,618	0/0:42,0:42:99:0,120,1135	1/1:4,13:17:36.95:530,37,0
chr10	93524839	.	CCAGAGG	C	3848.47	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=7.933;DP=637;FS=6.681;HRun=0;HaplotypeScore=143.7973;InbreedingCoeff=0.9065;MQ=61.53;MQ0=4;MQRankSum=-9.901;QD=23.32;ReadPosRankSum=1.005;VQSLOD=3.1012;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:81.28:0,81,2438	0/0:9,0:9:18.06:0,18,535	0/0:26,0:19:23.81:0,24,546	0/0:29,0:22:36.25:0,36,921	0/0:32,0:31:48.15:0,48,1312	1/1:9,17:26:36.12:762,36,0	1/1:12,16:28:39:694,39,0	0/0:28,0:28:34.36:0,34,942	0/0:22,0:22:42.13:0,42,1256	0/0:15,0:15:27.09:0,27,711	0/0:17,0:17:24.05:0,24,516	1/1:8,5:13:15.05:317,15,0	1/1:7,17:24:39.13:782,39,0	1/1:8,17:25:36.08:718,36,0	0/0:35,0:35:93.31:0,93,2740	0/0:29,0:29:69.24:0,69,2170	0/0:28,0:28:51.18:0,51,1602	0/0:7,0:7:18.06:0,18,588	0/0:22,0:24:42.14:0,42,988	0/0:21,0:30:36.80:0,37,772	0/0:9,0:18:8.92:0,9,140	1/1:9,9:18:6.02:127,6,0	1/1:9,13:22:19.95:384,20,0	1/1:5,4:9:3.01:64,3,0	0/0:14,0:14:27.09:0,27,845	0/0:12,0:21:42.13:0,42,813	0/0:17,0:34:54.13:0,54,1298	0/0:1,0:1:3.01:0,3,99
chr10	93525972	.	GA	G	15729.20	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=11.360;DP=780;FS=4.577;HRun=8;HaplotypeScore=76.5878;InbreedingCoeff=0.9809;MQ=73.58;MQ0=0;MQRankSum=-2.180;QD=25.62;ReadPosRankSum=3.546;VQSLOD=5.6832;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,50:51:99:1362,141,0	1/1:1,11:12:33.05:318,33,0	0/0:17,0:17:33.09:0,33,388	0/0:14,0:14:28.80:0,29,297	1/1:3,26:29:78.12:753,78,0	1/1:0,33:33:90.15:869,90,0	1/1:1,28:29:72.12:695,72,0	1/1:4,36:40:99:1043,108,0	1/1:4,27:31:81.12:782,81,0	1/1:1,25:26:75.12:724,75,0	1/1:3,16:19:45.06:435,45,0	1/1:3,32:35:93.15:898,93,0	1/1:1,28:29:77.75:753,78,0	1/1:5,25:30:66.10:637,66,0	1/1:4,48:52:99:1275,132,0	1/1:2,28:30:75.12:724,75,0	1/1:0,27:27:81.13:782,81,0	1/1:1,18:19:51.08:492,51,0	0/0:19,0:19:48.14:0,48,569	0/0:29,0:29:81.25:0,81,977	0/0:37,0:37:99:0,102,1218	1/1:1,22:23:66.10:637,66,0	1/1:1,30:31:87.14:840,87,0	1/1:2,28:30:75.12:724,75,0	1/1:2,34:36:96.15:927,96,0	0/0:23,0:23:63.19:0,63,758	0/0:27,0:27:75.23:0,75,905	1/1:0,2:2:6.01:58,6,0
chr10	93526248	.	C	CATT	2425.66	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.739;DP=659;FS=2.942;HRun=0;HaplotypeScore=87.5056;InbreedingCoeff=0.9978;MQ=86.21;MQ0=0;MQRankSum=-4.959;QD=52.73;ReadPosRankSum=1.796;VQSLOD=6.0486;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:25:47.56:1278,48,0	0/0:14,0:14:39.11:0,39,610	0/0:18,0:18:39.13:0,39,637	0/0:26,0:26:66.22:0,66,1048	0/0:28,0:28:78.25:0,78,1250	0/0:19,0:18:57.19:0,57,931	0/0:25,0:25:66.23:0,66,1068	0/0:27,0:27:72.25:0,72,1174	0/0:17,0:17:45.15:0,45,735	0/0:28,0:28:78.27:0,78,1269	0/0:29,0:29:75.26:0,75,1225	0/0:17,0:17:48.16:0,48,782	0/0:23,0:23:60.18:0,60,950	0/0:27,0:27:78.27:0,78,1274	0/0:25,0:25:66.23:0,66,1078	0/0:27,0:27:75.24:0,75,1201	1/1:4,17:21:57.20:1270,57,0	0/0:16,0:16:45.15:0,45,730	0/0:26,0:26:72.23:0,72,1131	0/0:33,0:33:90.31:0,90,1464	0/0:22,0:22:63.22:0,63,1029	0/0:30,0:30:90.30:0,90,1440	0/0:24,0:24:63.22:0,63,1029	0/0:25,0:25:75.26:0,75,1225	0/0:26,0:26:72.25:0,72,1170	0/0:31,0:31:87.28:0,87,1393	0/0:23,0:23:66.21:0,66,1051	0/0:7,0:7:21.07:0,21,342
chr10	93528070	.	T	TG	2087.82	PASS	AB=0.746;AC=23;AF=0.411;AN=56;BaseQRankSum=-3.692;DP=438;FS=6.556;HRun=1;HaplotypeScore=80.8826;InbreedingCoeff=0.7588;MQ=62.60;MQ0=5;MQRankSum=0.177;QD=12.89;ReadPosRankSum=-0.213;VQSLOD=1.9995;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:8.31:0,8,65	1/1:3,2:5:5.87:70,6,0	0/0:28,0:20:42.01:0,42,459	0/0:25,0:14:39.02:0,39,451	1/1:7,11:17:33.59:353,34,0	0/0:16,0:16:11.06:0,11,148	0/0:21,0:21:51:0,51,291	1/1:5,7:13:21.20:219,21,0	0/1:4,12:16:4.16:176,0,4	1/1:9,3:12:7.31:108,7,0	0/1:5,5:9:6.70:126,0,7	0/0:18,0:18:43.25:0,43,236	0/0:17,0:16:34.85:0,35,205	0/0:15,0:15:37.50:0,38,206	1/1:0,10:10:27.07:312,27,0	1/1:3,7:8:8.68:106,9,0	1/1:5,0:5:8.96:69,9,0	1/1:14,18:29:23.65:391,24,0	0/0:16,0:16:37.46:0,37,222	0/0:11,0:11:29.05:0,29,160	0/1:10,0:10:4.65:5,0,68	0/0:16,0:16:38.32:0,38,258	0/0:18,0:18:46.23:0,46,248	0/0:18,0:18:37.57:0,38,217	1/1:8,8:15:10.01:217,10,0	0/0:17,0:17:46.06:0,46,251	0/0:26,0:25:60.84:0,61,360	1/1:2,3:5:12.04:143,12,0
chr10	93528213	.	GAGTGTTCTCTCTCC	G	375.80	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.319;DP=493;FS=1.850;HRun=0;HaplotypeScore=196.4402;InbreedingCoeff=0.8548;MQ=80.24;MQ0=2;MQRankSum=-2.057;QD=46.97;ReadPosRankSum=-0.324;VQSLOD=3.4968;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,6935	0/0:7,0:7:18.06:0,18,1232	0/0:19,0:18:54.17:0,54,2950	0/0:17,0:14:15.28:0,15,2194	0/0:24,0:24:69.24:0,69,4697	0/0:17,0:17:45.15:0,45,2906	0/0:30,0:29:69.24:0,69,3942	0/0:23,0:23:66.23:0,66,4406	0/0:13,0:13:39.13:0,39,2652	0/0:20,0:20:57.19:0,57,3807	0/0:15,0:15:45.14:0,45,2967	0/0:21,0:21:60.21:0,60,4161	0/0:14,0:14:32.63:0,33,2272	0/0:18,0:18:54.19:0,54,3785	0/0:16,0:16:48.16:0,48,3421	0/0:10,0:10:30.10:0,30,2108	1/1:0,8:8:12.04:462,12,0	0/0:12,0:12:36.12:0,36,2243	0/0:16,0:16:45.15:0,45,2484	0/0:16,0:16:48.16:0,48,3326	0/0:27,0:27:75.26:0,75,5231	0/0:20,0:20:45.15:0,45,3044	0/0:16,0:16:42.14:0,42,2830	0/0:22,0:22:54.66:0,55,3834	0/0:15,0:15:45.15:0,45,3193	0/0:21,0:21:57.18:0,57,3806	0/0:17,0:17:51.18:0,51,3563	0/0:2,0:2:6.02:0,6,363
chr10	93529329	.	GACACACACACAC	G	379.33	PASS	AB=0.913;AC=13;AF=0.310;AN=42;BaseQRankSum=3.432;DP=482;FS=25.796;HRun=0;HaplotypeScore=150.1364;InbreedingCoeff=0.2616;MQ=61.86;MQ0=14;MQRankSum=-2.189;QD=3.61;ReadPosRankSum=-0.997;VQSLOD=0.5505;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:26:9.03:0,9,402	./.	./.	0/0:28,0:18:0:0,0,0	1/1:17,0:17:0.47:1,0,0	0/1:16,0:16:13.98:14,0,64	0/0:17,0:17:3.01:0,3,42	./.	1/1:8,0:8:3:50,3,0	./.	./.	0/1:13,0:15:36.95:38,0,37	0/0:11,0:11:3.48:0,3,66	0/0:17,0:17:18.05:0,18,281	1/1:9,0:12:6.02:165,6,0	1/1:15,5:20:2.91:70,3,0	0/0:25,0:23:15.52:0,16,468	0/0:21,2:22:3.01:0,3,111	0/0:17,0:17:3.48:0,3,93	0/0:11,0:15:6.02:0,6,214	0/0:41,0:38:30.09:0,30,861	./.	0/1:5,1:6:39.02:63,0,39	0/0:22,0:21:12.02:0,12,201	1/1:10,1:11:3.01:102,3,0	0/0:12,0:12:6.02:0,6,192	0/0:9,0:11:9.03:0,9,261	./.
chr10	93530798	.	C	CA	8423.31	PASS	AB=0.897;AC=19;AF=0.339;AN=56;BaseQRankSum=-16.087;DP=741;FS=1.331;HRun=4;HaplotypeScore=71.7372;InbreedingCoeff=0.9202;MQ=80.61;MQ0=0;MQRankSum=-2.467;QD=33.03;ReadPosRankSum=3.108;VQSLOD=5.5591;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,1360	1/1:0,11:11:30.10:410,30,0	0/0:33,0:31:78.04:0,78,859	0/0:32,0:30:78.10:0,78,850	1/1:2,26:28:70.46:930,70,0	0/0:21,0:21:57.16:0,57,647	0/0:34,0:34:96.26:0,96,1079	0/0:21,0:21:54.15:0,54,613	1/1:5,23:28:69.23:944,69,0	1/1:2,32:34:99:1368,102,0	1/1:0,26:26:66.22:903,66,0	0/0:24,0:24:69.18:0,69,773	0/0:31,0:31:87.25:0,87,987	0/0:25,0:25:75.20:0,75,841	1/1:1,27:28:78.26:1067,78,0	1/1:1,33:34:96.32:1314,96,0	0/0:45,0:45:99:0,129,1441	1/1:2,11:12:30.10:410,30,0	0/0:18,0:18:45.12:0,45,502	0/0:28,0:28:81.23:0,81,919	0/0:32,0:32:75.14:0,75,816	0/0:16,0:16:48.14:0,48,544	0/0:25,0:25:72.19:0,72,807	0/0:20,0:20:54.15:0,54,613	1/1:2,25:27:75.09:1026,75,0	0/1:23,3:26:50.92:51,0,643	0/0:24,0:24:69.20:0,69,782	0/0:14,0:14:42.12:0,42,476
chr10	93531689	.	A	AAAAC	7578.96	PASS	AB=0.776;AC=13;AF=0.232;AN=56;BaseQRankSum=-7.421;DP=756;FS=2.233;HRun=0;HaplotypeScore=133.9329;InbreedingCoeff=0.7310;MQ=64.03;MQ0=1;MQRankSum=-0.777;QD=34.14;ReadPosRankSum=-0.181;VQSLOD=5.0024;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,1:33:45.15:808,45,0	0/0:11,0:11:18.06:0,18,288	0/0:20,0:15:12.04:0,12,192	0/0:24,0:23:23.85:0,24,359	0/0:41,0:41:93.27:0,93,1438	0/0:20,0:18:24.07:0,24,644	0/0:37,0:38:38.74:0,39,1015	0/0:30,0:31:23.75:0,24,347	0/0:33,0:33:81.25:0,81,1243	0/0:36,0:36:60.15:0,60,925	0/0:21,0:21:42.14:0,42,665	0/0:18,0:19:39.10:0,39,550	0/0:17,0:17:33.11:0,33,526	0/0:37,0:38:81.24:0,81,1230	0/0:35,0:35:69.24:0,69,1105	0/0:22,0:22:54.18:0,54,862	1/1:19,0:24:21.54:353,22,0	0/0:21,0:22:43.27:0,43,697	0/1:11,10:20:13.67:684,0,14	0/1:12,14:26:5.89:860,0,6	1/1:10,23:33:57.19:1369,57,0	0/0:15,0:15:27.08:0,27,408	0/0:30,0:30:63.21:0,63,1009	0/0:34,0:34:60.20:0,60,957	0/0:27,0:27:51.17:0,51,806	1/1:10,28:38:39.25:1848,39,0	1/1:11,28:39:26.52:1650,27,0	0/1:8,0:8:7.87:8,0,101
chr10	93531863	.	G	GGTT	3481.76	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-10.257;DP=720;FS=2.493;HRun=0;HaplotypeScore=94.8964;InbreedingCoeff=0.9958;MQ=90.01;MQ0=0;MQRankSum=-2.414;QD=58.03;ReadPosRankSum=2.323;VQSLOD=5.8124;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:33:84.20:1851,84,0	0/0:18,0:18:51.16:0,51,823	0/0:25,0:25:60.17:0,60,917	0/0:30,0:30:75.20:0,75,1168	0/0:25,0:25:66.21:0,66,1064	0/0:16,0:16:45.15:0,45,746	0/0:29,0:29:84.25:0,84,1323	0/0:30,0:30:78.23:0,78,1205	0/0:24,0:24:66.21:0,66,1060	0/0:32,0:32:90.24:0,90,1395	0/0:14,0:14:42.12:0,42,635	0/0:30,0:30:87.26:0,87,1374	0/0:32,0:32:93.30:0,93,1514	0/0:37,0:37:93.30:0,93,1520	0/0:37,0:37:99:0,111,1743	0/0:35,0:35:96.29:0,96,1521	1/1:1,26:27:72.25:1631,72,0	0/0:18,0:18:54.09:0,54,815	0/0:18,0:18:51.15:0,51,801	0/0:28,0:28:81.28:0,81,1349	0/0:32,0:32:93.32:0,93,1546	0/0:23,0:23:66.19:0,66,1046	0/0:21,0:21:63.16:0,63,995	0/0:19,0:19:54.14:0,54,869	0/0:22,0:22:66.21:0,66,1072	0/0:29,0:29:84.27:0,84,1352	0/0:30,0:30:87.30:0,87,1447	0/0:6,0:6:18.06:0,18,300
chr10	93533481	.	TACACACACACAC	T	1404.36	PASS	AB=1.000;AC=21;AF=0.700;AN=30;BaseQRankSum=-1.048;DP=400;FS=36.881;HRun=0;HaplotypeScore=120.2213;InbreedingCoeff=0.3083;MQ=74.83;MQ0=48;MQRankSum=2.781;QD=8.89;ReadPosRankSum=3.647;VQSLOD=0.3008;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	1/1:18,1:19:21.03:388,21,0	./.	0/0:16,0:16:2.92:0,3,8	1/1:9,0:9:3.01:62,3,0	1/1:7,0:9:10.25:244,10,0	./.	1/1:12,1:10:6.02:188,6,0	./.	1/1:8,3:10:6:120,6,0	1/1:16,1:15:6.02:147,6,0	./.	0/0:14,0:12:3.01:0,3,110	0/1:17,0:15:65.13:125,0,65	./.	./.	0/0:20,0:17:3.01:0,3,96	./.	1/1:12,1:12:3.01:72,3,0	1/1:17,0:15:3.01:71,3,0	1/1:10,0:9:3.01:70,3,0	1/1:15,0:11:5.50:27,5,0	./.	0/0:14,0:6:3.01:0,3,127
chr10	93533545	.	CAGAGAGAGAG	C	497.53	PASS	AB=0.896;AC=16;AF=0.320;AN=50;BaseQRankSum=0.349;DP=493;FS=5.522;HRun=0;HaplotypeScore=116.3822;InbreedingCoeff=0.5682;MQ=35.31;MQ0=114;MQRankSum=-0.044;QD=2.94;ReadPosRankSum=0.890;VQSLOD=1.6531;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:12:0:0,0,1	0/0:7,0:6:2.72:0,3,124	./.	./.	0/0:23,0:21:30.10:0,30,961	1/1:18,0:22:0.29:0,0,0	1/1:23,0:9:2.56:18,3,0	0/0:21,0:18:16.21:0,16,398	0/1:13,0:10:2.07:2,0,233	0/0:23,0:15:32.85:0,33,1038	0/0:13,0:11:11.53:0,12,407	1/1:16,0:11:3.01:89,3,0	1/1:2,0:7:3.01:83,3,0	1/1:10,6:15:3.01:41,3,0	0/0:23,0:18:12.04:0,12,495	0/0:22,0:18:17.94:0,18,712	1/1:21,0:16:4.82:131,5,0	0/0:23,0:14:24.08:0,24,875	0/0:15,0:8:19.59:0,20,399	0/0:13,0:11:12.04:0,12,483	0/0:23,0:15:6.02:0,6,234	./.	0/0:9,7:14:2.63:0,3,54	1/1:16,0:9:9.03:268,9,0	0/0:15,0:11:12.04:0,12,355	0/0:31,0:24:63.22:0,63,2345	0/0:24,0:17:33.10:0,33,987	0/0:15,0:5:5.99:0,6,115
chr10	93534339	.	CACCTGTATCTAGT	C	1971.87	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.134;DP=682;FS=12.127;HRun=0;HaplotypeScore=248.3545;InbreedingCoeff=0.9053;MQ=82.56;MQ0=0;MQRankSum=-6.580;QD=73.03;ReadPosRankSum=-0.709;VQSLOD=1.9689;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.31:0,96,5636	0/0:15,0:15:45.15:0,45,2843	0/0:32,0:32:90.15:0,90,4630	0/0:25,0:25:71.73:0,72,3673	1/1:0,26:27:57.19:2067,57,0	0/0:36,0:36:99:0,105,6074	0/0:15,0:15:45.15:0,45,2825	0/0:33,0:33:99:0,99,5844	0/0:26,0:26:78.27:0,78,4923	0/0:37,0:37:99:0,111,6639	0/0:30,0:30:84.29:0,84,5492	0/0:20,0:20:60.21:0,60,3541	0/0:28,0:28:84.27:0,84,5056	0/0:22,0:22:66.21:0,66,4000	0/0:35,0:35:99:0,105,6894	0/0:29,0:29:87.30:0,87,5542	0/0:16,0:16:48.16:0,48,3260	0/0:13,0:13:39.13:0,39,2542	0/0:20,0:20:60.20:0,60,3536	0/0:22,0:22:66.23:0,66,4057	0/0:30,0:30:90.31:0,90,5936	0/0:19,0:19:57.18:0,57,3297	0/0:25,0:25:75.26:0,75,4665	0/0:17,0:17:51.18:0,51,3346	0/0:19,0:19:57.20:0,57,3782	0/0:28,0:28:84.29:0,84,5530	0/0:29,0:29:87.30:0,87,5758	0/0:2,0:2:6.02:0,6,252
chr10	93535400	.	TA	T	4590.32	PASS	AB=0.980;AC=49;AF=0.875;AN=56;BaseQRankSum=8.240;DP=545;FS=13.924;HRun=1;HaplotypeScore=165.6838;InbreedingCoeff=0.4430;MQ=84.29;MQ0=0;MQRankSum=-5.958;QD=9.09;ReadPosRankSum=7.985;VQSLOD=0.5887;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:9.68:229,10,0	1/1:4,0:4:11.14:52,11,0	0/0:19,0:19:32.50:0,32,610	0/0:21,0:21:13.12:0,13,581	0/1:25,0:25:11.86:209,0,12	1/1:19,0:19:19.26:145,19,0	1/1:20,0:20:53.23:219,53,0	1/1:29,0:29:21.63:248,22,0	1/1:11,0:11:5.53:98,6,0	1/1:16,2:18:45.13:231,45,0	0/1:15,1:16:20.29:95,0,20	1/1:14,0:14:37.45:153,37,0	1/1:20,0:20:17.78:184,18,0	1/1:17,0:17:45.21:194,45,0	1/1:18,0:18:19.40:144,19,0	1/1:27,0:27:67.21:285,67,0	1/1:24,0:24:18.93:194,19,0	1/1:14,0:14:35.22:149,35,0	1/1:26,1:27:16.98:245,17,0	1/1:11,0:11:30.63:146,31,0	1/1:37,0:37:58.25:320,58,0	1/1:16,0:16:19.22:172,19,0	1/1:13,0:13:8.61:99,9,0	1/1:16,0:16:9.91:107,10,0	0/1:14,0:14:12.50:85,0,13	1/1:29,0:29:60.56:271,61,0	1/1:21,1:22:20:168,20,0	1/1:15,0:15:21.08:146,21,0
chr10	93535401	.	AC	A	15450.44	PASS	AB=0.867;AC=54;AF=0.964;AN=56;BaseQRankSum=-5.248;DP=542;FS=24.064;HRun=4;HaplotypeScore=130.3433;InbreedingCoeff=-0.0348;MQ=83.03;MQ0=0;MQRankSum=-7.656;QD=28.51;ReadPosRankSum=3.891;VQSLOD=2.9867;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,11:31:75.17:832,75,0	1/1:3,1:4:12.04:143,12,0	0/1:15,2:17:35.83:36,0,306	0/1:17,4:21:24.91:25,0,326	1/1:22,4:26:57.17:680,57,0	1/1:12,6:18:48.11:529,48,0	1/1:7,13:20:60.11:635,60,0	1/1:8,22:30:84.23:950,84,0	1/1:9,3:12:30.09:347,30,0	1/1:10,8:18:51.15:594,51,0	1/1:8,7:15:35.82:380,36,0	1/1:12,2:14:42.12:488,42,0	1/1:16,4:20:55.97:638,56,0	1/1:10,7:17:51.09:548,51,0	1/1:13,5:18:51.09:544,51,0	1/1:20,7:27:78.21:899,78,0	1/1:18,7:25:66.16:751,66,0	1/1:12,1:13:39.12:466,39,0	1/1:12,15:27:75.17:853,75,0	1/1:9,2:11:33.10:388,33,0	1/1:32,5:37:93.16:1083,93,0	1/1:9,6:15:45.11:500,45,0	1/1:7,5:12:27.06:292,27,0	1/1:9,6:15:36.09:418,36,0	1/1:12,2:14:36.09:412,36,0	1/1:22,6:29:81.71:955,82,0	1/1:17,4:20:54.12:598,54,0	1/1:14,1:15:41.15:465,41,0
chr10	93535409	.	T	TC	20185.19	PASS	AB=0.880;AC=54;AF=0.964;AN=56;BaseQRankSum=-6.660;DP=554;FS=22.154;HRun=1;HaplotypeScore=120.0202;InbreedingCoeff=-0.0381;MQ=79.21;MQ0=0;MQRankSum=-6.903;QD=36.44;ReadPosRankSum=0.930;VQSLOD=2.8634;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,16:33:87.22:1210,87,0	1/1:4,0:4:12.04:177,12,0	0/1:15,1:16:35.89:40,0,36	0/1:14,4:18:80.78:81,0,87	1/1:19,7:26:72.06:1019,72,0	1/1:13,5:18:51.10:701,51,0	1/1:10,13:23:66.15:833,66,0	1/1:6,23:29:78.25:1108,78,0	1/1:9,5:14:42.09:584,42,0	1/1:12,11:23:66.12:884,66,0	1/1:5,8:13:38.84:453,39,0	1/1:14,3:17:48.15:685,48,0	1/1:17,3:20:59.96:795,60,0	1/1:10,7:17:51.09:673,51,0	1/1:11,5:16:48.16:675,48,0	1/1:20,6:26:75.17:1051,75,0	1/1:18,6:24:54.10:763,54,0	1/1:15,0:15:42.12:588,42,0	1/1:11,12:24:72.22:1013,72,0	1/1:10,3:13:39.05:528,39,0	1/1:30,6:36:96.19:1359,96,0	1/1:9,6:15:45.02:581,45,0	1/1:7,7:14:39.06:512,39,0	1/1:13,4:17:39.06:523,39,0	1/1:12,2:14:42.12:586,42,0	1/1:24,5:29:81.01:1162,81,0	1/1:19,6:24:72.23:1042,72,0	1/1:14,1:15:41.74:558,42,0
chr10	93535583	.	ATT	A	1879.63	PASS	AB=0.698;AC=23;AF=0.411;AN=56;BaseQRankSum=-3.352;DP=449;FS=4.757;HRun=14;HaplotypeScore=59.7607;InbreedingCoeff=0.7485;MQ=70.46;MQ0=8;MQRankSum=-0.767;QD=9.74;ReadPosRankSum=2.714;VQSLOD=1.8268;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:40:66:0,66,646	0/1:3,2:6:0.19:47,0,0	0/0:32,0:11:19.53:0,20,218	0/0:22,0:11:14.64:0,15,158	1/1:10,12:22:29.60:261,30,0	0/1:11,2:22:18.08:18,0,125	0/0:5,0:19:36.42:0,36,198	1/1:5,12:18:32.74:289,33,0	1/1:0,0:2:2.74:12,3,0	1/1:4,5:8:8.92:84,9,0	1/1:4,12:16:29.97:277,30,0	0/0:4,0:13:15.49:0,15,85	0/0:5,0:9:7.49:0,7,26	0/0:2,1:10:12.35:0,12,43	1/1:3,10:11:20.94:194,21,0	1/1:6,7:13:14.88:131,15,0	0/0:5,0:21:32.55:0,33,309	1/1:5,10:14:34.17:275,34,0	0/0:9,0:10:17.53:0,18,202	0/0:14,0:13:30:0,30,345	0/0:10,0:11:27.01:0,27,315	0/0:4,0:6:2.50:0,2,9	0/1:11,1:14:5.40:5,0,138	0/0:3,0:12:17.98:0,18,94	1/1:10,9:19:26.68:235,27,0	0/0:18,0:19:36.08:0,36,457	0/0:14,0:14:19.88:0,20,257	1/1:6,10:19:19.99:256,20,0
chr10	93536499	.	CA	C	1859.29	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.200;DP=638;FS=8.312;HRun=2;HaplotypeScore=59.1890;InbreedingCoeff=0.9704;MQ=90.76;MQ0=0;MQRankSum=-5.870;QD=32.06;ReadPosRankSum=2.556;VQSLOD=3.1248;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:81.26:1046,81,0	0/0:3,0:3:9.03:0,9,135	0/0:24,0:24:72.22:0,72,1027	0/0:28,0:28:69.48:0,69,1099	0/0:20,0:20:57.15:0,57,777	0/0:24,0:24:72.24:0,72,1061	0/0:21,0:21:63.19:0,63,890	0/0:23,0:23:69.23:0,69,1015	0/0:24,0:24:72.24:0,72,1077	0/0:36,0:36:99:0,105,1538	0/0:24,0:24:66.20:0,66,951	0/0:23,0:23:69.23:0,69,1014	0/0:22,0:22:63.16:0,63,943	0/0:20,0:20:60.20:0,60,891	0/0:30,0:30:90.28:0,90,1305	0/0:21,0:21:63.20:0,63,924	1/1:0,27:27:72.23:935,72,0	0/0:17,0:17:45.14:0,45,651	0/0:18,0:18:54.18:0,54,791	0/0:35,0:35:99:0,105,1490	0/0:26,0:26:78.23:0,78,1124	0/0:16,0:16:48.13:0,48,661	0/0:19,0:19:57.18:0,57,835	0/0:18,0:18:54.18:0,54,808	0/0:21,0:21:63.20:0,63,926	0/0:22,0:22:66.22:0,66,972	0/0:34,0:34:99:0,102,1507	0/0:11,0:11:27.56:0,28,405
chr10	93537483	.	CA	C	894.63	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.373;DP=562;FS=0.000;HRun=9;HaplotypeScore=75.1118;InbreedingCoeff=0.9421;MQ=84.30;MQ0=0;MQRankSum=-0.352;QD=19.45;ReadPosRankSum=0.499;VQSLOD=3.8469;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:48.50:440,48,0	0/0:4,0:4:12.04:0,12,138	0/0:24,1:24:14.99:0,15,399	0/0:15,0:15:30.04:0,30,314	0/0:27,0:27:75.21:0,75,856	0/0:25,0:25:69.21:0,69,796	0/0:14,0:14:36.11:0,36,414	0/0:33,1:35:68.80:0,69,1028	0/0:24,0:24:72.21:0,72,831	0/0:19,0:19:48.14:0,48,552	0/0:18,0:19:57:0,57,637	0/0:22,0:22:66.19:0,66,753	0/0:21,0:21:57.17:0,57,658	0/0:17,0:17:51.15:0,51,588	0/0:13,0:13:36.09:0,36,405	0/0:16,0:16:48.14:0,48,554	1/1:0,26:26:63.03:576,63,0	0/0:10,0:10:27.08:0,27,312	0/0:22,0:22:9.41:0,9,193	0/0:22,0:22:57.53:0,58,306	0/0:28,0:28:51.34:0,51,325	0/0:15,0:15:42.11:0,42,476	0/0:28,0:28:84.21:0,84,944	0/0:21,0:21:60.15:0,60,673	0/0:23,0:23:60.01:0,60,672	0/0:25,0:25:62.48:0,62,325	0/0:20,0:20:45.53:0,46,239	0/0:6,0:6:15.04:0,15,173
chr10	93538017	.	GT	G	2246.63	PASS	AB=0.866;AC=20;AF=0.357;AN=56;BaseQRankSum=10.547;DP=462;FS=2.403;HRun=12;HaplotypeScore=73.3663;InbreedingCoeff=0.7625;MQ=73.47;MQ0=0;MQRankSum=0.249;QD=12.48;ReadPosRankSum=0.975;VQSLOD=3.7948;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:42.07:0,42,420	1/1:1,3:4:4.25:43,4,0	0/0:14,0:10:11.20:0,11,110	0/0:15,0:11:14.27:0,14,110	1/1:4,17:21:16.56:298,17,0	0/0:10,1:11:0.81:0,1,190	0/0:14,1:15:6.79:0,7,236	0/0:31,1:34:60.44:0,60,724	1/1:3,8:11:19.62:179,20,0	1/1:3,16:19:47.73:363,48,0	1/1:2,20:23:55.25:394,55,0	0/1:11,3:14:13.30:13,0,241	0/0:9,0:9:15.03:0,15,152	0/0:13,1:15:12.67:0,13,290	1/1:3,20:24:58.81:447,59,0	1/1:5,15:20:35.83:279,36,0	0/0:25,0:26:44.47:0,44,595	1/1:1,9:10:23.86:181,24,0	0/0:19,0:19:41.99:0,42,387	0/0:19,0:20:53.84:0,54,510	0/0:10,0:10:21.04:0,21,213	0/0:14,1:15:21.85:0,22,402	0/0:13,0:13:27.05:0,27,269	0/0:9,0:9:27.05:0,27,274	1/1:0,12:13:31.92:238,32,0	0/0:23,1:24:28.45:0,28,567	0/0:16,0:16:39.08:0,39,396	0/1:18,2:20:17.68:18,0,293
chr10	93539369	.	TATCC	T	14743.62	PASS	AB=0.845;AC=42;AF=0.750;AN=56;BaseQRankSum=12.392;DP=712;FS=2.817;HRun=0;HaplotypeScore=122.4730;InbreedingCoeff=0.7905;MQ=69.16;MQ0=5;MQRankSum=-2.102;QD=27.05;ReadPosRankSum=3.264;VQSLOD=4.7250;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,12:21:14.24:563,14,0	1/1:5,13:18:33.11:539,33,0	0/0:28,0:22:33.11:0,33,670	0/0:28,0:21:30.08:0,30,577	1/1:11,25:36:66.23:1076,66,0	1/1:9,26:35:60.20:979,60,0	1/1:6,15:21:30.10:490,30,0	0/1:23,9:32:30.44:373,0,30	1/1:8,17:25:42.14:686,42,0	1/1:11,19:30:57.19:930,57,0	1/1:5,24:29:63.22:1027,63,0	1/1:5,19:24:54.18:881,54,0	1/1:7,29:36:78.27:1273,78,0	1/1:11,20:31:42.14:686,42,0	1/1:7,13:20:27.09:441,27,0	1/1:9,17:26:41.98:686,42,0	1/1:10,16:26:42.14:686,42,0	1/1:1,4:5:12.04:196,12,0	0/0:17,0:17:24.08:0,24,534	0/0:40,0:40:99:0,102,2446	0/0:28,0:28:69.24:0,69,1648	1/1:11,17:28:51.17:833,51,0	1/1:7,18:25:42.14:686,42,0	1/1:8,9:17:21.07:341,21,0	1/1:10,27:37:72.25:1175,72,0	0/1:18,2:20:52.81:53,0,903	0/0:26,0:26:69.19:0,69,1554	1/1:0,3:3:9.03:147,9,0
chr10	93541682	.	G	GA	1112.78	PASS	AB=0.923;AC=5;AF=0.089;AN=56;BaseQRankSum=-7.636;DP=522;FS=3.113;HRun=7;HaplotypeScore=48.2630;InbreedingCoeff=0.7901;MQ=70.43;MQ0=0;MQRankSum=-0.027;QD=19.87;ReadPosRankSum=1.375;VQSLOD=3.1271;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:28:63.19:761,63,0	0/0:9,0:9:27.04:0,27,261	0/0:9,0:8:11.57:0,12,164	0/0:6,0:6:12.01:0,12,112	0/0:43,0:43:99:0,117,1123	0/0:17,0:17:42.06:0,42,406	0/0:14,0:14:39.04:0,39,370	0/0:30,0:30:75.10:0,75,719	0/0:18,0:18:51.06:0,51,482	0/0:29,0:29:81.13:0,81,782	0/0:17,0:17:45.07:0,45,434	0/0:9,0:9:21.03:0,21,203	0/0:15,0:15:33.05:0,33,319	0/0:15,0:15:45.07:0,45,435	0/0:16,0:16:42.07:0,42,405	0/0:23,0:23:66.10:0,66,634	1/1:1,15:16:39.12:471,39,0	0/1:11,1:12:6.19:6,0,231	0/0:19,0:19:51.07:0,51,488	0/0:34,0:34:86.95:0,87,835	0/0:9,0:9:27.04:0,27,261	0/0:9,0:9:27.04:0,27,261	0/0:20,0:20:54.08:0,54,521	0/0:13,0:13:36.05:0,36,348	0/0:30,0:30:78.11:0,78,748	0/0:22,0:22:57.06:0,57,541	0/0:29,0:28:84.13:0,84,811	0/0:11,0:11:30.05:0,30,290
chr10	93542085	.	T	TTTTTTG	11117.54	PASS	AB=0.966;AC=23;AF=0.411;AN=56;BaseQRankSum=1.249;DP=644;FS=1.679;HRun=0;HaplotypeScore=165.1013;InbreedingCoeff=0.8637;MQ=67.14;MQ0=2;MQRankSum=-8.472;QD=37.56;ReadPosRankSum=-2.690;VQSLOD=4.1433;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:60.15:0,60,1021	1/1:4,1:5:6.02:161,6,0	0/0:21,0:15:6.02:0,6,88	0/0:20,0:16:13.74:0,14,166	1/1:23,6:29:72.19:1456,72,0	0/0:18,0:18:42.14:0,42,786	0/0:25,0:25:36.12:0,36,672	1/1:40,0:40:45.14:760,45,0	1/1:24,4:28:51.16:1086,51,0	1/1:34,5:38:75.24:1664,75,0	1/1:18,9:27:66.19:1502,66,0	0/0:20,0:20:39.12:0,39,690	0/0:21,0:21:36.12:0,36,711	0/0:15,0:15:24.06:0,24,410	1/1:23,6:29:69.21:1612,69,0	1/1:21,8:29:57.18:1421,57,0	0/0:25,0:25:49.45:0,49,982	1/1:14,0:12:12.04:236,12,0	0/0:30,0:30:51.12:0,51,891	0/0:19,0:19:48.14:0,48,845	0/0:16,0:16:20.99:0,21,311	0/0:10,0:10:20.99:0,21,317	0/0:13,0:13:26.65:0,27,536	0/0:27,0:27:8.49:0,8,847	1/1:22,2:24:51.12:1022,51,0	0/1:27,1:28:64.98:65,0,1067	0/0:33,0:33:66.22:0,66,1274	1/1:4,0:3:6.02:133,6,0
chr10	93542103	.	GTT	G	4309.12	PASS	AB=0.805;AC=11;AF=0.196;AN=56;BaseQRankSum=4.923;DP=640;FS=16.292;HRun=7;HaplotypeScore=132.4386;InbreedingCoeff=-0.1933;MQ=60.07;MQ0=13;MQRankSum=-6.019;QD=17.03;ReadPosRankSum=2.332;VQSLOD=1.7642;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.24:0,72,1184	0/1:3,0:3:19.74:20,0,90	0/0:35,1:16:16.57:0,17,164	0/0:24,0:11:14.02:0,14,193	0/1:22,11:31:99:515,0,415	0/0:25,0:25:66.23:0,66,1141	0/0:17,0:17:42.14:0,42,734	0/1:28,8:35:99:329,0,672	0/1:12,11:23:92.64:519,0,93	0/1:19,11:29:99:730,0,214	0/1:26,5:30:99:467,0,309	0/0:21,0:21:51.17:0,51,860	0/0:20,0:19:45.15:0,45,784	0/0:14,0:14:33.11:0,33,558	0/1:16,12:28:99:725,0,126	0/1:20,4:24:99:550,0,184	0/0:31,0:30:76.54:0,77,1306	0/1:13,4:16:99:119,0,296	0/0:30,0:25:57.17:0,57,915	0/0:19,0:19:51.16:0,51,838	0/0:12,0:12:30.10:0,30,509	0/0:10,0:10:30.10:0,30,520	0/0:16,0:16:45.11:0,45,737	0/0:24,0:24:60.21:0,60,1035	0/1:22,2:24:99:301,0,400	0/0:29,0:29:19.33:0,19,1292	0/0:30,0:30:77.99:0,78,1330	0/1:2,1:2:4.24:32,0,4
chr10	93542119	.	GT	G	4280.01	PASS	AB=0.634;AC=45;AF=0.804;AN=56;BaseQRankSum=-6.198;DP=657;FS=7.723;HRun=12;HaplotypeScore=132.2144;InbreedingCoeff=0.2604;MQ=71.92;MQ0=15;MQRankSum=1.946;QD=7.59;ReadPosRankSum=8.346;VQSLOD=2.2060;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:24:30.54:88,31,0	1/1:0,0:5:7.93:23,8,0	0/0:57,0:24:17.05:0,17,211	0/0:36,0:18:23.01:0,23,154	1/1:16,1:30:24.46:97,24,0	0/1:5,19:24:37.54:294,0,38	1/1:6,10:16:20.89:162,21,0	1/1:19,0:40:13.70:85,14,0	0/1:13,0:20:7.46:7,0,70	0/1:15,0:29:21.91:22,0,85	1/1:7,0:26:12.51:70,13,0	1/1:4,17:21:35.85:279,36,0	1/1:6,15:20:5.41:225,5,0	1/1:4,12:16:29.87:230,30,0	0/1:14,0:25:13.65:14,0,57	0/1:6,0:21:33.10:33,0,36	1/1:4,0:30:40.74:118,41,0	1/1:6,0:16:2.87:26,3,0	1/1:10,18:23:31:391,31,0	1/1:5,16:22:43.76:324,44,0	1/1:1,6:7:20.92:162,21,0	0/1:2,6:8:9.52:118,0,10	1/1:3,12:17:32.65:227,33,0	1/1:6,23:30:28.36:392,28,0	1/1:4,2:20:16.37:99,16,0	1/1:6,19:27:57.12:411,57,0	1/1:8,21:29:39.14:380,39,0	0/1:2,0:5:1.04:1,0,9
chr10	93542212	.	CCTCTGCCT	C	2171.14	PASS	AB=0.593;AC=7;AF=0.125;AN=56;BaseQRankSum=8.064;DP=484;FS=3.164;HRun=0;HaplotypeScore=122.2927;InbreedingCoeff=0.7543;MQ=60.25;MQ0=5;MQRankSum=-4.921;QD=37.43;ReadPosRankSum=-0.123;VQSLOD=3.0196;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:37:83.93:0,84,2644	0/0:6,0:6:15.05:0,15,605	0/0:17,0:12:30.04:0,30,783	0/0:22,0:19:38.99:0,39,1087	0/0:15,0:15:42.14:0,42,1483	0/0:20,0:20:51.17:0,51,1701	0/0:17,0:18:45.15:0,45,1685	0/0:20,0:20:42.14:0,42,1341	0/0:15,0:15:39.13:0,39,1425	0/0:17,0:17:42.11:0,42,1167	0/0:17,0:17:45.63:0,46,1630	0/0:15,0:15:36.12:0,36,1255	0/0:19,0:19:48.64:0,49,1861	0/0:17,0:17:51.18:0,51,2029	0/0:13,0:13:36.12:0,36,1346	0/0:18,0:18:54.17:0,54,1997	0/0:35,0:35:78.24:0,78,2299	0/0:14,0:13:33.11:0,33,1243	1/1:6,9:14:27.08:609,27,0	1/1:5,8:12:18.02:280,18,0	0/0:3,18:21:0.10:0,0,1	0/0:10,0:10:30.10:0,30,1073	0/0:9,0:9:24.08:0,24,819	0/0:30,0:30:72.25:0,72,2928	0/0:14,0:14:33.11:0,33,1077	0/1:5,11:16:47.66:674,0,48	1/1:6,8:14:30.10:755,30,0	0/0:4,0:4:3.01:0,3,129
chr10	93548149	.	A	AT	10190.51	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-6.970;DP=620;FS=7.513;HRun=1;HaplotypeScore=82.6239;InbreedingCoeff=0.9977;MQ=78.52;MQ0=0;MQRankSum=-2.161;QD=41.59;ReadPosRankSum=0.198;VQSLOD=4.9389;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.17:0,51,660	1/1:0,5:5:15.05:224,15,0	0/0:29,0:29:84.18:0,84,1043	0/0:14,0:14:36.12:0,36,465	1/1:0,26:26:75.21:1091,75,0	0/0:27,0:27:75.14:0,75,950	0/0:18,0:18:54.18:0,54,700	1/1:2,28:30:84.27:1237,84,0	1/1:1,17:18:48.63:713,49,0	1/1:1,24:25:68.82:1065,69,0	1/1:1,24:25:72.09:1017,72,0	0/0:20,0:20:50.80:0,51,626	0/0:22,0:22:63.20:0,63,816	0/0:25,0:25:72.23:0,72,932	1/1:1,38:39:99:1701,115,0	1/1:0,28:28:81.27:1206,81,0	0/0:17,0:17:51.17:0,51,662	1/1:1,10:11:33.11:491,33,0	0/0:24,0:24:72.23:0,72,934	0/0:20,0:20:60.20:0,60,777	0/0:20,0:20:60.19:0,60,776	0/0:17,0:17:48.02:0,48,580	0/0:22,0:22:60.06:0,60,722	0/0:18,0:18:54.18:0,54,700	1/1:0,26:26:63.21:933,63,0	0/0:29,0:29:87.28:0,87,1127	0/0:34,0:34:96.12:0,96,1204	1/1:0,12:12:36.07:513,36,0
chr10	93550403	.	ATGGGGTACAAGGCATATATGGCAAG	A	6266.80	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.633;DP=572;FS=59.728;HRun=0;HaplotypeScore=365.8854;InbreedingCoeff=0.9765;MQ=80.88;MQ0=1;MQRankSum=-8.078;QD=113.94;ReadPosRankSum=2.505;VQSLOD=2.3131;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:75.22:0,75,7882	0/0:8,0:8:24.08:0,24,1795	0/0:21,0:21:60.21:0,60,4014	0/0:21,0:21:57.20:0,57,4323	0/0:33,0:33:96.32:0,96,9375	0/0:23,0:23:66.23:0,66,6042	0/0:20,0:20:57.20:0,57,6010	0/0:31,0:31:87.30:0,87,7704	0/0:25,0:25:75.26:0,75,7552	0/0:36,0:36:99:0,99,10277	0/0:18,0:18:51.16:0,51,4044	0/0:19,0:19:57.20:0,57,5124	0/0:24,0:24:69.24:0,69,6998	0/0:21,0:21:60.21:0,60,6280	0/0:30,0:30:90.31:0,90,9237	0/0:25,0:25:72.25:0,72,7265	0/0:20,0:20:54.19:0,54,5964	0/0:12,0:11:33.11:0,33,3516	1/1:4,3:7:9.03:300,9,0	1/1:3,9:12:21.07:1434,21,0	1/1:1,5:6:12.04:525,12,0	0/0:16,0:16:45.15:0,45,3937	0/0:28,0:28:75.26:0,75,8091	0/0:24,0:24:69.24:0,69,6648	0/0:24,0:23:69.20:0,69,6192	1/1:2,9:11:24.08:1550,24,0	1/1:5,14:19:36.12:2458,36,0	0/0:8,0:8:24.08:0,24,2645
chr10	93550436	.	A	ACT	1513.89	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.131;DP=504;FS=0.000;HRun=0;HaplotypeScore=119.0813;InbreedingCoeff=0.9332;MQ=72.47;MQ0=1;MQRankSum=-0.500;QD=37.85;ReadPosRankSum=0.906;VQSLOD=4.9565;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:23:54.14:913,54,0	0/0:5,0:5:12.04:0,12,162	0/0:21,0:21:48.16:0,48,629	0/0:28,0:28:60.57:0,61,873	0/0:27,0:27:66.22:0,66,892	0/0:15,0:15:33.11:0,33,446	0/0:24,0:24:63.21:0,63,852	0/0:35,0:35:90.28:0,90,1187	0/0:20,0:20:48.16:0,48,649	0/0:31,0:31:81.26:0,81,1083	0/0:13,0:13:36.12:0,36,487	0/0:13,0:13:30.10:0,30,406	0/0:16,0:16:45.15:0,45,608	0/0:18,0:18:45.15:0,45,607	0/0:28,0:28:73.31:0,73,1010	0/0:23,0:23:53.89:0,54,801	1/1:1,15:16:42.14:722,42,0	0/0:10,0:9:21.07:0,21,284	0/0:8,0:8:18.06:0,18,242	0/0:17,0:16:14.61:0,15,532	0/0:6,0:6:9.02:0,9,121	0/0:9,0:9:24.08:0,24,324	0/0:25,0:25:66.22:0,66,885	0/0:18,0:18:36.05:0,36,487	0/0:16,0:16:48.16:0,48,646	0/0:15,0:15:42.14:0,42,568	0/0:16,0:16:42.14:0,42,568	0/0:6,0:6:15.05:0,15,203
chr10	93558284	.	CGGGGGGG	C	5662.24	PASS	AB=1.000;AC=42;AF=0.778;AN=54;BaseQRankSum=3.368;DP=401;FS=5.050;HRun=17;HaplotypeScore=134.9139;InbreedingCoeff=0.6205;MQ=48.75;MQ0=12;MQRankSum=-2.283;QD=16.13;ReadPosRankSum=6.622;VQSLOD=0.7106;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,7:12:15.06:389,15,0	1/1:14,0:13:17.95:240,18,0	0/0:22,0:9:20.83:0,21,235	0/0:11,0:1:3.01:0,3,93	1/1:18,0:18:17.84:242,18,0	1/1:23,0:23:32.83:439,33,0	1/1:20,0:19:30:400,30,0	1/1:21,0:21:19.59:281,20,0	1/1:18,0:18:29.96:404,30,0	1/1:13,0:14:11.42:161,11,0	1/1:31,0:32:44.79:606,45,0	1/1:13,0:13:11.68:155,12,0	1/1:11,0:11:17.90:240,18,0	1/1:14,0:14:23.99:306,24,0	1/1:11,0:11:8.82:120,9,0	1/1:13,0:13:8.49:120,8,0	1/1:8,14:22:23.89:477,24,0	1/1:15,0:15:14.46:189,14,0	0/0:3,0:3:3.01:0,3,101	./.	0/0:6,0:5:3.01:0,3,96	1/1:7,0:7:12.01:160,12,0	1/1:14,0:14:8.77:120,9,0	0/1:26,0:26:0.28:95,0,0	1/1:19,0:19:26.87:361,27,0	0/1:4,0:4:34.44:34,0,90	0/0:7,0:7:12.04:0,12,345	1/1:9,0:9:8.96:121,9,0
chr10	93558291	.	GGGGGGGGGGGA	G	8795.95	PASS	AB=0.964;AC=36;AF=0.643;AN=56;BaseQRankSum=2.282;DP=379;FS=1.311;HRun=0;HaplotypeScore=136.7316;InbreedingCoeff=0.5877;MQ=56.65;MQ0=8;MQRankSum=-4.156;QD=28.65;ReadPosRankSum=5.952;VQSLOD=4.1395;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:17.87:0,18,135	1/1:12,1:12:18.02:352,18,0	0/0:21,0:10:26.98:0,27,544	0/0:12,0:4:12.04:0,12,431	1/1:2,16:18:24:592,24,0	1/1:21,0:21:12.33:549,12,0	1/1:18,0:17:30.03:521,30,0	1/1:3,24:27:74.71:1061,75,0	1/1:2,14:16:29.99:922,30,0	1/1:3,9:12:17.90:417,18,0	1/1:4,25:29:51.09:1419,51,0	0/1:13,0:13:1.86:211,0,2	1/1:9,1:10:21.02:371,21,0	1/1:14,0:14:7.26:383,7,0	0/1:10,0:10:13.42:144,0,13	0/1:10,0:10:31.11:141,0,31	0/0:17,0:17:29.38:0,29,207	1/1:12,0:12:14.30:249,14,0	0/0:2,0:2:6.02:0,6,257	0/0:1,0:1:3.01:0,3,142	0/0:6,0:5:6.02:0,6,287	1/1:8,0:8:12.04:208,12,0	1/1:16,0:16:11.94:176,12,0	1/1:26,0:26:4.07:155,4,0	1/1:20,2:22:29.61:568,30,0	0/1:5,1:6:80.25:80,0,311	0/0:4,0:4:12.04:0,12,534	1/1:1,5:6:8.95:277,9,0
chr10	93558292	.	GGGGGGGGGGA	G	9955.37	PASS	AB=0.864;AC=39;AF=0.696;AN=56;BaseQRankSum=0.650;DP=373;FS=0.742;HRun=0;HaplotypeScore=125.9907;InbreedingCoeff=0.7045;MQ=56.92;MQ0=7;MQRankSum=-2.092;QD=32.11;ReadPosRankSum=5.889;VQSLOD=4.0997;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:10:1.42:1,0,58	1/1:3,9:11:18.06:492,18,0	0/0:20,0:10:26.64:0,27,485	0/0:12,0:4:12.04:0,12,400	1/1:18,0:18:24:437,24,0	1/1:7,13:20:32.86:937,33,0	1/1:2,16:17:30.04:852,30,0	1/1:26,1:27:74.71:879,75,0	1/1:15,0:15:30.05:663,30,0	1/1:11,0:11:17.96:313,18,0	1/1:28,0:28:51.09:1029,51,0	1/1:4,9:13:17.93:381,18,0	1/1:2,8:10:21.02:511,21,0	1/1:2,12:14:24.01:667,24,0	1/1:2,8:10:8.84:255,9,0	1/1:3,6:9:11.78:275,12,0	0/0:17,0:17:11.90:0,12,57	1/1:3,9:12:14.29:415,14,0	0/0:2,0:2:6.02:0,6,234	0/0:1,0:1:3.01:0,3,128	0/0:7,0:6:9.03:0,9,311	1/1:0,8:8:12.04:341,12,0	1/1:1,15:16:11.95:275,12,0	0/1:8,18:26:0.67:231,0,1	1/1:4,18:22:29.69:748,30,0	0/1:5,0:5:54.34:54,0,283	0/0:4,0:4:12.04:0,12,498	1/1:6,0:6:8.97:199,9,0
chr10	93558295	.	GGGGGGGAGGA	G	7362.80	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=3.212;DP=337;FS=7.729;HRun=0;HaplotypeScore=124.6094;InbreedingCoeff=0.7072;MQ=62.05;MQ0=6;MQRankSum=-6.023;QD=27.68;ReadPosRankSum=8.591;VQSLOD=2.4868;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:20.07:0,20,213	1/1:12,0:11:18.06:389,18,0	0/0:18,0:10:29.60:0,30,500	0/0:10,0:6:18.06:0,18,473	1/1:17,0:17:4.88:304,5,0	1/1:14,0:14:33.11:754,33,0	1/1:16,0:16:30.10:685,30,0	1/1:25,0:25:4.10:312,4,0	1/1:14,0:14:30.10:507,30,0	1/1:10,0:10:10.10:191,10,0	1/1:26,0:26:47.29:779,47,0	1/1:10,3:13:12.32:314,12,0	1/1:10,0:10:17.91:397,18,0	1/1:12,1:13:24.08:574,24,0	1/1:8,0:8:8.99:210,9,0	1/1:6,0:6:9.92:203,10,0	0/0:17,0:17:26.03:0,26,179	1/1:9,0:9:15.05:324,15,0	0/0:3,0:3:9.03:0,9,278	0/0:1,0:1:3.01:0,3,127	0/0:7,0:6:9.03:0,9,330	1/1:8,0:8:12.04:271,12,0	1/1:15,0:15:9.92:205,10,0	0/1:20,0:20:5.01:180,0,5	1/1:20,0:20:27.60:578,28,0	0/1:5,0:5:36.11:36,0,305	0/0:4,0:4:12.04:0,12,470	1/1:5,0:5:9.03:149,9,0
chr10	93558627	.	AT	A	8371.70	PASS	AB=0.545;AC=37;AF=0.661;AN=56;BaseQRankSum=13.497;DP=520;FS=0.372;HRun=9;HaplotypeScore=51.4355;InbreedingCoeff=0.9082;MQ=65.86;MQ0=0;MQRankSum=-1.939;QD=22.81;ReadPosRankSum=2.306;VQSLOD=5.5961;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.12:0,42,481	1/1:1,8:9:21.01:191,21,0	0/0:8,0:7:15.04:0,15,172	0/0:7,0:5:12.01:0,12,122	1/1:4,28:32:75.91:686,76,0	1/1:3,26:29:69.03:632,69,0	1/1:0,10:10:27.01:247,27,0	1/1:5,28:33:84.02:768,84,0	1/1:1,18:19:48.03:439,48,0	1/1:3,32:35:93.02:842,93,0	1/1:2,24:26:69.03:630,69,0	1/1:1,19:20:48.02:439,48,0	1/1:0,20:20:57.03:522,57,0	1/1:1,8:9:18.01:165,18,0	1/1:0,31:31:87.05:796,87,0	1/1:2,13:15:39.02:357,39,0	0/0:19,0:19:51.15:0,51,588	0/1:1,5:6:19.60:95,0,20	0/0:13,0:13:14.08:0,14,327	0/0:19,0:19:57.16:0,57,649	0/0:15,0:16:41.96:0,42,465	1/1:1,11:12:33.02:301,33,0	1/1:4,21:25:57.03:521,57,0	1/1:2,13:15:30.01:275,30,0	1/1:0,13:13:27.01:247,27,0	0/0:26,1:28:50.57:0,51,801	0/0:27,1:28:53.77:0,54,872	1/1:0,8:8:24.01:220,24,0
chr10	93559175	.	GTCA	G	16468.89	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=15.470;DP=517;FS=4.011;HRun=0;HaplotypeScore=81.3807;InbreedingCoeff=0.9648;MQ=63.98;MQ0=0;MQRankSum=-0.783;QD=49.75;ReadPosRankSum=2.489;VQSLOD=7.0904;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.23:0,72,1725	1/1:0,5:5:12.04:224,12,0	0/0:3,0:3:6.02:0,6,146	0/0:6,0:6:16.61:0,17,324	1/1:0,27:27:63.17:1138,63,0	1/1:0,20:20:54.19:1003,54,0	1/1:0,8:8:24.08:447,24,0	1/1:0,28:28:84.29:1523,84,0	1/1:0,19:19:48.16:895,48,0	1/1:1,23:24:72.25:1330,72,0	1/1:0,32:32:81.28:1472,81,0	1/1:0,20:20:54.19:1006,54,0	1/1:0,25:25:60.21:1112,60,0	1/1:0,18:18:45.15:839,45,0	1/1:0,23:23:66.23:1230,66,0	1/1:0,13:13:39.13:727,39,0	0/0:25,0:25:75.26:0,75,1818	1/1:0,10:9:27.09:503,27,0	0/0:36,0:36:99:0,108,2529	0/0:23,0:23:69.24:0,69,1687	0/0:10,0:10:30.10:0,30,698	1/1:0,5:5:15.05:279,15,0	1/1:0,11:11:30.05:559,30,0	1/1:0,5:5:9.01:168,9,0	1/1:0,20:20:54.19:1006,54,0	0/0:27,0:27:81.28:0,81,1979	0/0:30,0:30:90.31:0,90,2205	1/1:0,18:18:54.19:1007,54,0
chr10	93559967	.	C	CCT	447.79	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=4.247;DP=332;FS=0.000;HRun=0;HaplotypeScore=56.9420;InbreedingCoeff=0.7891;MQ=64.75;MQ0=1;MQRankSum=-3.217;QD=31.98;ReadPosRankSum=-1.052;VQSLOD=4.3788;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.22:0,69,1035	0/0:5,0:5:12.04:0,12,184	0/0:25,0:4:5.56:0,6,30	0/0:19,0:10:11.98:0,12,226	0/0:30,0:30:72.24:0,72,1100	0/0:9,0:9:21.07:0,21,321	0/0:12,0:12:27.09:0,27,413	0/0:34,0:34:80.19:0,80,1179	0/0:6,0:6:18.06:0,18,275	0/0:9,0:9:27.06:0,27,389	0/0:19,0:19:48.16:0,48,728	0/0:4,0:4:12.04:0,12,184	0/0:11,0:11:30.09:0,30,438	0/0:9,0:9:27.04:0,27,367	0/0:8,0:8:21.03:0,21,295	0/0:4,0:4:9.03:0,9,138	0/0:23,0:23:57.19:0,57,871	0/0:17,0:17:43.03:0,43,641	./.	1/1:1,3:4:9.03:168,9,0	1/1:0,3:3:9.03:173,9,0	0/0:3,0:3:6.02:0,6,92	0/0:14,0:14:39.13:0,39,597	0/0:11,0:11:33.10:0,33,485	0/0:17,0:17:39.11:0,39,553	./.	1/1:1,6:7:12.04:231,12,0	0/0:3,0:3:6.02:0,6,93
chr10	93559996	.	TTA	T	494.87	PASS	AB=1.000;AC=7;AF=0.146;AN=48;BaseQRankSum=0.435;DP=306;FS=0.711;HRun=0;HaplotypeScore=47.5171;InbreedingCoeff=0.7065;MQ=64.13;MQ0=11;MQRankSum=-3.610;QD=5.75;ReadPosRankSum=1.041;VQSLOD=2.5275;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,2:20:22.57:231,23,0	0/0:6,0:5:12.19:0,12,81	0/1:32,0:5:11.42:15,0,11	0/0:34,0:10:18.50:0,18,115	0/0:13,0:13:27.03:0,27,180	0/0:12,0:12:23.53:0,24,175	0/0:12,0:11:28.47:0,28,262	0/0:16,0:16:35.31:0,35,194	0/0:3,0:3:5.98:0,6,48	0/0:8,0:7:14.85:0,15,124	0/0:11,0:11:29.86:0,30,198	0/0:9,0:9:14.98:0,15,131	0/0:9,0:9:21.91:0,22,215	0/0:8,0:8:12.82:0,13,110	0/0:8,0:7:9.74:0,10,50	0/0:5,0:5:11.51:0,12,76	1/1:25,4:29:32.42:352,32,0	0/0:19,0:16:38.69:0,39,268	1/1:2,0:2:5.81:32,6,0	./.	./.	0/0:5,0:5:11.99:0,12,104	0/0:10,0:9:15.43:0,15,147	0/0:12,0:12:14.03:0,14,127	0/0:12,0:11:24.30:0,24,154	./.	./.	0/0:5,0:5:11.91:0,12,88
chr10	93561027	.	C	CA	5653.65	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-13.247;DP=698;FS=2.827;HRun=8;HaplotypeScore=65.6561;InbreedingCoeff=0.9890;MQ=61.07;MQ0=1;MQRankSum=2.086;QD=28.85;ReadPosRankSum=2.004;VQSLOD=5.3335;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:28:63.19:726,63,0	0/0:5,0:5:9:0,9,82	0/0:13,0:10:27:0,27,242	0/0:29,0:17:26.95:0,27,238	0/0:28,0:28:78.03:0,78,709	0/0:19,0:19:54:0,54,485	0/0:23,0:23:69.04:0,69,631	0/0:34,0:33:81.02:0,81,738	0/0:17,0:17:39:0,39,357	0/0:43,0:43:99:0,117,1063	0/0:32,0:32:87.04:0,87,796	0/0:22,0:22:60.03:0,60,549	0/0:23,0:23:57:0,57,517	0/0:19,0:19:51.01:0,51,462	0/0:32,0:32:90.03:0,90,818	0/0:19,0:19:48.02:0,48,439	1/1:2,25:27:60.18:692,60,0	0/0:19,0:19:44.98:0,45,404	1/1:1,20:21:57.13:636,57,0	1/1:2,25:27:72.05:810,72,0	1/1:1,18:19:53.99:603,54,0	0/0:23,0:23:69.04:0,69,632	0/0:31,0:31:75.02:0,75,686	0/0:21,0:21:60.03:0,60,549	0/0:25,0:25:69.04:0,69,631	1/1:6,33:39:77.80:1134,78,0	1/1:2,32:34:92.64:1053,93,0	0/0:25,0:25:72.04:0,72,659
chr10	93562954	.	AT	A	3612.02	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.901;DP=583;FS=0.000;HRun=7;HaplotypeScore=55.5621;InbreedingCoeff=0.9995;MQ=70.74;MQ0=0;MQRankSum=-1.268;QD=26.17;ReadPosRankSum=2.902;VQSLOD=4.2513;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.11:0,48,584	0/0:13,0:13:36.12:0,36,453	0/0:14,0:14:33.10:0,33,408	0/0:10,0:10:26.93:0,27,299	0/0:23,0:23:66.21:0,66,830	1/1:1,22:23:57.13:582,57,0	1/1:1,12:13:30.06:306,30,0	0/0:36,0:36:99:0,99,1225	0/0:24,0:24:69.19:0,69,840	0/0:28,0:28:84.27:0,84,1052	0/0:32,0:32:96.25:0,96,1160	1/1:4,15:19:45.10:459,45,0	1/1:0,15:15:45.10:459,45,0	1/1:1,16:17:45.10:459,45,0	0/0:31,0:31:90.29:0,90,1131	0/0:26,0:26:69.22:0,69,868	0/0:14,0:14:39.12:0,39,491	0/0:11,0:11:30.10:0,30,377	0/0:29,0:29:75.20:0,75,906	0/0:29,0:29:75.24:0,75,944	0/0:22,0:22:63.20:0,63,793	1/1:2,11:13:33.07:337,33,0	1/1:0,24:24:57.13:582,57,0	1/1:0,14:14:42.10:429,42,0	0/0:17,0:17:51.16:0,51,641	0/0:30,0:30:81.25:0,81,998	0/0:23,0:23:60.17:0,60,731	0/0:17,0:17:42.12:0,42,516
chr10	93563390	.	A	AC	1872.82	PASS	AB=0.800;AC=16;AF=0.286;AN=56;BaseQRankSum=-4.790;DP=479;FS=1.080;HRun=10;HaplotypeScore=64.4251;InbreedingCoeff=0.6093;MQ=89.30;MQ0=1;MQRankSum=-1.566;QD=11.35;ReadPosRankSum=-0.041;VQSLOD=2.9794;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,16:21:26.28:314,26,0	0/0:7,0:8:14.02:0,14,104	0/0:27,1:22:23.86:0,24,229	0/1:22,1:21:8.05:8,0,36	0/0:16,0:18:31.95:0,32,248	1/1:3,15:18:15.88:303,16,0	0/1:3,9:12:18.31:197,0,18	0/0:28,1:30:5.71:0,6,172	0/0:12,0:12:11.19:0,11,203	0/0:13,0:13:29.89:0,30,239	0/0:19,0:19:35.53:0,36,295	1/1:6,11:17:5.50:263,5,0	1/1:5,7:12:17.85:192,18,0	0/1:7,7:14:9.59:113,0,10	0/0:18,0:20:49.02:0,49,381	0/0:21,0:21:59.91:0,60,492	0/0:13,0:13:26.96:0,27,222	0/0:8,0:8:14.98:0,15,123	0/0:11,0:11:20.97:0,21,172	0/0:26,0:28:51.91:0,52,395	0/0:17,0:18:44.82:0,45,357	0/1:10,0:11:31.59:64,0,32	1/1:5,11:16:26.94:287,27,0	1/1:6,13:19:30.08:320,30,0	0/0:15,0:15:32.95:0,33,271	0/0:17,0:18:38.35:0,38,294	0/0:27,0:29:67.74:0,68,533	0/0:5,0:5:8.98:0,9,74
chr10	93564864	.	AAAG	A	1391.80	PASS	AB=0.963;AC=34;AF=0.630;AN=54;BaseQRankSum=6.079;DP=382;FS=5.212;HRun=0;HaplotypeScore=63.7586;InbreedingCoeff=-0.4409;MQ=42.83;MQ0=41;MQRankSum=5.099;QD=3.72;ReadPosRankSum=2.785;VQSLOD=1.0544;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:20:43.53:44,0,56	0/1:6,0:5:9.66:14,0,10	0/0:7,0:1:2.90:0,3,16	0/1:6,0:1:0:0,0,0	1/1:15,0:15:6.42:68,6,0	0/1:16,0:14:35.40:35,0,73	0/1:11,0:6:21.36:21,0,25	0/1:22,2:23:89.55:164,0,90	0/1:6,0:6:25.34:25,0,35	0/1:11,2:13:9.57:142,0,10	1/1:13,1:13:2.07:64,2,0	1/1:7,4:9:17.32:165,17,0	0/1:6,0:4:16.89:17,0,27	0/1:15,0:13:20.80:55,0,21	1/1:5,0:2:4.96:20,5,0	1/1:12,1:10:12.87:56,13,0	0/1:28,1:23:52.56:53,0,124	0/1:23,1:19:78.25:87,0,78	0/1:19,0:13:27.21:27,0,62	1/1:13,0:13:25.70:96,26,0	1/1:7,0:3:2.51:14,3,0	./.	1/1:9,0:7:13.95:82,14,0	0/1:6,5:8:16.22:16,0,18	0/1:26,2:27:65.68:101,0,66	0/1:20,0:18:59.76:65,0,60	0/1:26,0:25:97.28:102,0,97	0/1:5,0:5:7.82:8,0,26
chr10	93564865	.	AAG	A	660.08	PASS	AB=0.986;AC=22;AF=0.407;AN=54;BaseQRankSum=-0.631;DP=381;FS=11.383;HRun=0;HaplotypeScore=61.8222;InbreedingCoeff=-0.1918;MQ=42.98;MQ0=41;MQRankSum=0.789;QD=2.19;ReadPosRankSum=-2.640;VQSLOD=-0.0638;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,2:20:6.67:102,0,7	0/0:6,0:5:4.48:0,4,23	0/0:7,0:1:1.55:0,2,4	0/1:6,0:1:0:0,0,0	0/1:15,0:15:3.38:3,0,29	0/0:16,0:14:14.10:0,14,107	0/1:11,0:6:10.98:11,0,28	0/1:23,1:23:97.75:118,0,98	0/1:6,0:6:1.09:1,0,38	0/1:13,0:13:13.28:81,0,13	0/1:13,0:12:12.43:36,0,12	1/1:10,1:9:10.81:98,11,0	0/1:6,0:4:17.07:17,0,26	0/1:15,0:13:8.30:8,0,32	0/0:5,0:2:2.51:0,3,7	0/1:12,0:9:3.18:5,0,3	0/1:25,4:23:64.60:177,0,65	0/1:24,0:19:25.04:25,0,86	0/1:20,0:14:2.04:2,0,90	0/0:13,0:13:17.03:0,17,51	0/1:7,0:3:0.41:0,0,0	./.	1/1:9,0:7:6.85:55,7,0	0/1:11,0:8:3.15:3,0,18	0/1:28,0:27:48.51:49,0,82	0/1:20,0:18:5.67:6,0,107	0/0:26,0:25:6.72:0,7,145	0/0:5,0:5:8.97:0,9,46
chr10	93564867	.	GAAA	G	3925.10	PASS	AB=0.662;AC=43;AF=0.796;AN=54;BaseQRankSum=-3.998;DP=381;FS=0.000;HRun=16;HaplotypeScore=56.5637;InbreedingCoeff=0.0107;MQ=45.47;MQ0=41;MQRankSum=1.293;QD=10.75;ReadPosRankSum=0.577;VQSLOD=-0.4222;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,1:19:34.61:46,0,35	1/1:2,4:5:5.93:65,6,0	0/0:7,0:1:3.01:0,3,39	0/0:8,0:3:2.88:0,3,15	1/1:4,11:15:25.17:259,25,0	0/1:9,8:15:0.34:142,0,0	1/1:8,3:6:2.71:32,3,0	1/1:20,4:24:2.80:214,3,0	1/1:3,3:6:6.01:65,6,0	1/1:5,8:13:23.59:243,24,0	1/1:3,10:12:20.82:193,21,0	1/1:7,3:8:18.04:185,18,0	1/1:5,1:4:2.92:24,3,0	1/1:5,9:12:6.12:140,6,0	1/1:3,2:2:6.01:63,6,0	1/1:5,7:9:14.72:157,15,0	0/1:21,0:23:34.77:35,0,67	0/1:11,10:18:43.98:229,0,44	0/1:11,9:14:4.69:238,0,5	1/1:1,13:14:33:355,33,0	1/1:6,1:3:3.01:31,3,0	./.	1/1:6,2:6:14.52:123,15,0	1/1:11,1:9:5.24:54,5,0	0/1:10,15:26:1.09:180,0,1	1/1:5,15:18:35.98:384,36,0	0/1:8,18:25:8.68:404,0,9	1/1:2,3:5:5.96:65,6,0
chr10	93565701	.	AT	A	13792.27	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.332;DP=557;FS=0.000;HRun=7;HaplotypeScore=61.0023;InbreedingCoeff=0.9025;MQ=74.69;MQ0=0;MQRankSum=-4.914;QD=25.64;ReadPosRankSum=2.648;VQSLOD=5.4947;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:20:48.10:489,48,0	1/1:2,4:6:12.03:122,12,0	0/0:14,0:14:24.01:0,24,266	0/0:5,0:5:5.15:0,5,79	1/1:2,32:34:96.22:979,96,0	1/1:1,12:13:36.08:367,36,0	1/1:2,20:22:57.13:582,57,0	1/1:11,39:50:99:1173,117,0	1/1:0,15:15:36.08:367,36,0	1/1:3,23:26:69.11:686,69,0	1/1:1,14:15:42.05:417,42,0	1/1:2,21:23:57.13:582,57,0	1/1:4,18:22:54.11:551,54,0	1/1:4,19:23:57.12:582,57,0	1/1:2,18:20:51.11:520,51,0	1/1:1,14:15:39.09:398,39,0	1/1:3,26:29:69.16:704,69,0	1/1:2,19:21:41.72:508,42,0	1/1:1,15:16:45.10:458,45,0	1/1:4,19:23:57.13:582,57,0	1/1:2,13:15:36.08:367,36,0	1/1:1,9:10:21.05:214,21,0	1/1:0,26:26:69.05:704,69,0	1/1:1,6:7:15.03:153,15,0	1/1:3,24:27:72.16:734,72,0	1/1:3,18:21:54.10:544,54,0	1/1:4,28:32:81.18:826,81,0	1/1:0,7:7:18.02:183,18,0
chr10	93565842	.	T	TA	1045.76	PASS	AB=0.947;AC=7;AF=0.125;AN=56;BaseQRankSum=-5.850;DP=555;FS=0.000;HRun=10;HaplotypeScore=61.1955;InbreedingCoeff=0.5363;MQ=72.69;MQ0=0;MQRankSum=-0.680;QD=9.34;ReadPosRankSum=-1.345;VQSLOD=1.8978;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:57.08:594,57,0	0/0:10,0:10:26.97:0,27,222	0/1:23,0:16:3.49:3,0,66	0/0:11,0:11:10.07:0,10,63	0/0:28,0:28:80.91:0,81,665	0/0:16,0:16:40.97:0,41,322	0/0:11,0:11:32.96:0,33,271	0/1:26,2:28:3.67:4,0,378	0/0:15,0:15:41.94:0,42,342	0/0:26,0:26:68.90:0,69,566	0/0:37,0:38:99:0,101,818	0/0:20,0:20:50.91:0,51,416	0/0:19,0:19:41.93:0,42,345	0/0:15,0:15:38.88:0,39,320	0/0:21,0:21:50.90:0,51,415	0/0:20,0:20:44.92:0,45,369	1/1:4,21:26:35.35:565,35,0	0/0:22,3:26:29.27:0,29,323	0/0:18,0:18:35.92:0,36,290	0/0:28,1:31:43.99:0,44,543	0/0:7,0:7:20.96:0,21,169	0/1:8,1:10:11.02:11,0,127	0/0:17,0:17:44.90:0,45,369	0/0:6,0:6:14.95:0,15,119	0/0:25,0:27:66.98:0,67,529	0/0:22,0:22:47.90:0,48,394	0/0:27,0:27:71.87:0,72,586	0/0:11,0:11:3.60:0,4,174
chr10	93565928	.	C	CTA	5113.69	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-12.599;DP=539;FS=0.423;HRun=0;HaplotypeScore=66.0259;InbreedingCoeff=0.9787;MQ=82.11;MQ0=2;MQRankSum=-0.615;QD=45.25;ReadPosRankSum=2.462;VQSLOD=5.9104;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:35.33:0,35,712	0/0:8,0:8:24.08:0,24,344	0/0:18,0:18:48.14:0,48,663	0/0:12,0:12:30.07:0,30,399	0/0:28,0:28:84.28:0,84,1202	1/1:0,10:9:24.08:440,24,0	1/1:1,8:9:18.06:330,18,0	0/0:22,0:22:60.20:0,60,859	0/0:14,0:14:42.13:0,42,584	0/0:36,0:36:99:0,102,1462	0/0:30,0:30:84.25:0,84,1141	1/1:0,18:18:51.17:934,51,0	1/1:1,12:14:30.10:550,30,0	1/1:1,19:19:45.15:825,45,0	0/0:29,0:29:84.27:0,84,1186	0/0:21,0:21:63.20:0,63,880	0/0:20,0:20:60.20:0,60,859	0/0:22,0:22:57.15:0,57,793	0/0:17,0:17:51.14:0,51,680	0/0:40,0:40:99:0,108,1524	0/0:8,0:8:24.08:0,24,343	1/1:1,8:9:21.07:385,21,0	1/1:1,25:26:69.24:1265,69,0	1/1:0,7:7:21.07:385,21,0	0/0:22,0:22:57.19:0,57,817	0/0:20,0:20:48.15:0,48,672	0/0:38,0:38:99:0,105,1502	0/0:2,0:2:6.02:0,6,85
chr10	93566457	.	CACTG	C	2034.15	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.448;DP=609;FS=6.076;HRun=0;HaplotypeScore=99.1532;InbreedingCoeff=0.9943;MQ=79.38;MQ0=0;MQRankSum=-7.270;QD=46.23;ReadPosRankSum=-2.126;VQSLOD=3.4238;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.22:0,63,1652	0/0:13,0:13:39.13:0,39,1022	0/0:20,0:20:54.19:0,54,1336	0/0:12,0:12:30.10:0,30,774	0/0:33,0:33:90.31:0,90,2372	0/0:34,0:34:96.32:0,96,2379	0/0:13,0:13:36.11:0,36,814	1/1:1,32:33:93.30:1659,93,0	0/0:20,0:20:54.19:0,54,1396	0/0:30,0:30:81.27:0,81,2027	0/0:24,0:24:60.19:0,60,1519	0/0:19,0:19:57.20:0,57,1475	0/0:20,0:20:57.20:0,57,1472	0/0:19,0:19:57.17:0,57,1448	0/0:29,0:29:81.28:0,81,2108	0/0:23,0:23:57.18:0,57,1451	0/0:21,0:21:54.19:0,54,1425	0/0:11,0:11:33.11:0,33,871	0/0:25,0:25:66.20:0,66,1604	0/0:30,0:30:87.30:0,87,2288	0/0:18,0:18:48.15:0,48,1213	0/0:8,0:8:18.06:0,18,475	0/0:16,0:16:39.13:0,39,1028	0/0:9,0:9:27.09:0,27,704	0/0:28,0:28:69.24:0,69,1805	0/0:34,0:34:93.28:0,93,2349	0/0:34,0:34:90.31:0,90,2255	1/1:0,11:11:27.09:496,27,0
chr10	93568588	.	AT	A	483.44	PASS	AB=0.900;AC=5;AF=0.089;AN=56;BaseQRankSum=6.424;DP=702;FS=0.701;HRun=9;HaplotypeScore=67.0962;InbreedingCoeff=0.8649;MQ=79.76;MQ0=0;MQRankSum=-1.840;QD=13.81;ReadPosRankSum=-0.244;VQSLOD=3.4927;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:39.02:357,39,0	0/0:13,0:13:33.10:0,33,381	0/0:15,0:16:32.17:0,32,327	0/0:19,0:19:32.92:0,33,344	0/0:30,0:30:87.22:0,87,981	0/0:33,0:33:90.26:0,90,1029	0/0:34,1:35:65.81:0,66,1011	0/0:31,1:33:62.78:0,63,961	0/0:19,1:20:29.70:0,30,596	0/0:39,0:40:99:0,117,1312	0/0:34,0:35:96.12:0,96,1085	0/0:33,0:33:90.27:0,90,1039	0/0:28,0:28:78.05:0,78,870	0/0:26,0:27:75.05:0,75,842	0/0:34,0:34:99:0,99,1134	0/0:22,0:22:66.20:0,66,762	1/1:2,10:12:27.01:247,27,0	0/0:15,1:16:14.33:0,14,422	0/1:8,1:9:0.37:0,0,250	0/0:43,0:43:99:0,126,1444	0/0:11,0:11:33.10:0,33,381	0/0:31,0:31:91.07:0,91,1006	0/0:27,0:27:75.20:0,75,853	0/0:17,0:19:50.98:0,51,568	0/0:29,1:31:59.61:0,60,914	0/0:31,1:32:65.81:0,66,1011	0/0:30,1:31:62.81:0,63,977	0/0:8,0:8:24.07:0,24,277
chr10	93569476	.	A	ACC	476.85	PASS	AB=0.888;AC=5;AF=0.089;AN=56;BaseQRankSum=1.469;DP=488;FS=4.826;HRun=0;HaplotypeScore=74.9577;InbreedingCoeff=-0.1058;MQ=40.64;MQ0=42;MQRankSum=1.629;QD=4.54;ReadPosRankSum=-3.634;VQSLOD=0.5867;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:27:67.47:0,67,872	0/0:5,0:4:12.04:0,12,141	0/0:25,0:5:14.93:0,15,165	0/0:8,0:2:2.84:0,3,38	0/0:26,0:25:59.69:0,60,694	0/0:16,0:15:42.11:0,42,547	0/0:13,0:11:27.03:0,27,332	0/0:26,0:24:56.46:0,56,765	0/0:14,0:13:33.05:0,33,388	0/0:18,0:18:51.12:0,51,624	0/0:19,0:18:45.32:0,45,532	0/0:13,0:13:33.05:0,33,395	0/0:19,0:18:44.49:0,44,542	0/0:17,0:17:47.57:0,48,565	0/0:15,0:15:42.11:0,42,503	0/0:13,0:12:36.11:0,36,445	0/0:25,0:25:54.97:0,55,677	0/0:12,0:10:23.43:0,23,265	0/1:29,1:24:81.41:81,0,311	0/1:22,5:23:99:160,0,192	0/1:7,0:6:15.39:15,0,21	0/0:11,0:11:30.08:0,30,397	0/0:10,0:9:27.05:0,27,351	0/0:13,0:9:12.04:0,12,151	0/0:15,0:14:36.11:0,36,459	0/1:12,7:19:99:286,0,210	0/1:19,1:20:50.85:51,0,337	0/0:19,0:9:24.90:0,25,290
chr10	93569997	.	C	CCAACCAAG	15474.86	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-6.266;DP=670;FS=3.035;HRun=0;HaplotypeScore=162.3572;InbreedingCoeff=0.9661;MQ=82.97;MQ0=0;MQRankSum=-15.219;QD=94.94;ReadPosRankSum=-1.438;VQSLOD=5.3289;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,14:29:57.20:2344,57,0	0/0:13,0:13:39.13:0,39,1091	0/0:25,0:25:69.24:0,69,1756	0/0:25,0:25:65.14:0,65,1872	0/0:43,0:43:99:0,123,3252	0/0:25,0:25:75.26:0,75,2076	0/0:14,0:14:39.13:0,39,1044	0/0:38,0:38:99:0,108,2928	0/0:23,0:23:63.22:0,63,1732	0/0:30,0:30:84.29:0,84,2321	0/0:26,0:26:78.21:0,78,1991	0/0:30,0:30:87.30:0,87,2418	0/0:26,0:26:66.22:0,66,1735	0/0:27,0:27:78.26:0,78,2117	0/0:23,0:23:66.23:0,66,1847	0/0:22,0:22:63.22:0,63,1763	1/1:10,7:18:42.14:1552,42,0	0/0:10,0:10:30.10:0,30,839	1/1:10,8:20:57.20:2059,57,0	1/1:10,15:29:81.27:2723,81,0	1/1:2,3:6:3.01:70,3,0	0/0:31,0:31:81.26:0,81,2164	0/0:20,0:20:60.19:0,60,1589	0/0:19,0:19:51.18:0,51,1427	0/0:31,0:31:90.30:0,90,2384	1/1:4,18:26:78.25:2981,78,0	1/1:11,22:34:90.31:3747,90,0	0/0:6,0:6:18.06:0,18,503
chr10	93570785	.	A	AC	2147.73	PASS	AB=0.768;AC=30;AF=0.536;AN=56;BaseQRankSum=5.320;DP=316;FS=5.033;HRun=8;HaplotypeScore=59.6435;InbreedingCoeff=0.4942;MQ=65.45;MQ0=3;MQRankSum=-3.799;QD=10.18;ReadPosRankSum=2.285;VQSLOD=1.7748;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:8:1.71:0,2,6	1/1:1,1:2:6.01:60,6,0	0/0:27,0:18:40.20:0,40,347	0/1:10,0:7:2.60:3,0,55	0/1:10,4:14:34.85:189,0,35	0/0:15,0:15:38.87:0,39,337	0/0:15,0:15:32.94:0,33,292	0/1:17,2:17:14.08:155,0,14	1/1:0,8:8:15.04:171,15,0	1/1:3,5:8:9.48:92,9,0	1/1:8,7:15:15.04:166,15,0	0/0:10,0:10:27.01:0,27,247	0/0:7,0:7:21.01:0,21,192	0/0:9,0:9:27.01:0,27,247	0/1:4,1:6:1.95:141,0,2	0/1:2,7:9:10.45:150,0,10	1/1:4,0:17:28.16:141,28,0	1/1:3,16:20:18.32:408,18,0	1/1:14,0:14:1.07:44,1,0	1/1:9,0:10:25.84:138,26,0	1/1:2,0:2:2.84:14,3,0	0/0:1,0:1:3:0,3,27	0/0:3,0:3:5.98:0,6,55	0/0:10,0:9:26.94:0,27,236	0/1:3,5:8:2.51:60,0,3	1/1:17,0:17:9.71:103,10,0	1/1:19,0:20:37.33:199,37,0	1/1:0,8:6:9.03:103,9,0
chr10	93570792	.	C	CCCCA	3136.01	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=-1.437;DP=305;FS=8.161;HRun=0;HaplotypeScore=78.1434;InbreedingCoeff=0.2134;MQ=64.25;MQ0=3;MQRankSum=-1.579;QD=15.08;ReadPosRankSum=-0.867;VQSLOD=2.0568;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:1.96:0,2,23	1/1:2,0:2:2.06:25,2,0	0/0:25,0:16:43.17:0,43,559	0/1:11,0:7:1.52:2,0,80	0/1:13,0:13:44.39:44,0,83	0/0:15,0:15:16.90:0,17,275	0/0:13,0:13:32.94:0,33,283	0/1:15,0:13:20.52:155,0,21	1/1:8,0:8:2.60:11,3,0	0/1:7,0:7:5.25:79,0,5	0/1:12,0:12:25.55:28,0,26	0/0:10,0:10:26.98:0,27,235	0/0:7,0:7:20.96:0,21,170	0/0:10,0:10:26.97:0,27,228	0/1:6,0:6:26.43:41,0,26	0/1:10,0:10:1.65:2,0,60	0/1:17,0:16:1.77:68,0,2	0/1:22,0:21:44.21:44,0,71	1/1:1,8:12:29.92:450,30,0	1/1:3,7:12:24.94:573,25,0	1/1:0,4:4:3.01:79,3,0	0/0:1,0:1:2.99:0,3,24	0/1:3,0:3:15.94:16,0,39	0/0:10,0:9:4.96:0,5,180	1/1:6,0:6:6.47:25,6,0	1/1:10,8:18:39.06:796,39,0	1/1:4,9:21:39.13:862,39,0	1/1:8,0:6:4.36:12,4,0
chr10	93570793	.	CA	C	697.14	PASS	AB=0.962;AC=20;AF=0.357;AN=56;BaseQRankSum=0.929;DP=292;FS=3.507;HRun=1;HaplotypeScore=60.2710;InbreedingCoeff=0.6906;MQ=64.75;MQ0=3;MQRankSum=-0.471;QD=6.83;ReadPosRankSum=-1.394;VQSLOD=0.1644;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:5.98:0,6,47	1/1:3,0:3:8.37:59,8,0	0/0:25,0:16:43:0,43,546	0/0:11,0:7:8.18:0,8,129	0/1:11,1:12:5.51:88,0,6	0/0:15,0:15:42.04:0,42,523	0/0:13,0:13:33.02:0,33,419	1/1:10,3:13:0.45:110,0,0	1/1:8,0:8:13.15:58,13,0	1/1:6,0:6:12.16:76,12,0	1/1:9,0:9:17.33:107,17,0	0/0:10,0:10:27.09:0,27,360	0/0:7,0:7:21.07:0,21,281	0/0:10,0:10:30.09:0,30,384	1/1:5,1:6:1.73:67,2,0	1/1:10,0:10:6.28:72,6,0	0/0:15,0:14:32.49:0,32,231	1/1:22,0:21:21.93:184,22,0	0/0:9,0:9:22.83:0,23,125	0/0:12,0:12:30.11:0,30,150	0/0:4,0:4:2.74:0,3,12	0/0:1,0:1:3.01:0,3,40	0/0:3,0:3:9.03:0,9,117	0/0:10,0:9:30.08:0,30,371	0/1:5,0:5:2.77:22,0,3	0/0:18,0:19:43.78:0,44,236	0/0:21,0:20:42.61:0,43,216	1/1:8,0:6:8.48:41,8,0
chr10	93575752	.	C	CG	5676.96	PASS	AB=0.552;AC=37;AF=0.661;AN=56;BaseQRankSum=-11.018;DP=559;FS=5.937;HRun=6;HaplotypeScore=90.8185;InbreedingCoeff=0.8531;MQ=72.38;MQ0=3;MQRankSum=0.359;QD=15.95;ReadPosRankSum=-0.190;VQSLOD=4.4633;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:33:22.96:0,23,71	1/1:7,0:7:8.80:86,9,0	0/0:20,0:16:25.84:0,26,151	0/0:16,0:16:7.48:0,7,191	1/1:29,1:30:52.92:452,53,0	1/1:6,16:22:33.10:397,33,0	0/1:3,13:16:14.21:137,0,14	1/1:6,29:35:80.09:840,80,0	1/1:22,0:22:33.11:297,33,0	1/1:20,2:22:60.56:508,61,0	1/1:18,2:20:30.01:301,30,0	1/1:4,16:20:12.03:139,12,0	1/1:5,11:16:17.20:164,17,0	1/1:10,7:17:18.99:347,19,0	1/1:12,0:13:17.10:89,17,0	1/1:17,3:20:42.09:436,42,0	0/0:31,0:33:41.48:0,41,130	1/1:11,2:13:17.04:152,17,0	0/0:4,0:17:35.32:0,35,150	0/0:2,0:14:25.03:0,25,99	0/0:2,0:17:15.23:0,15,67	1/1:5,17:22:36.31:373,36,0	1/1:8,17:25:29.48:307,29,0	1/1:4,17:21:42.11:498,42,0	1/1:13,0:13:8.26:129,8,0	0/0:2,0:27:53.91:0,54,208	0/0:9,0:23:45.86:0,46,190	1/1:2,0:2:2.99:24,3,0
chr10	93575757	.	GGA	G	1527.31	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-4.688;DP=570;FS=2.147;HRun=0;HaplotypeScore=103.9071;InbreedingCoeff=0.2604;MQ=71.66;MQ0=2;MQRankSum=-1.741;QD=8.63;ReadPosRankSum=3.824;VQSLOD=3.5562;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:29.58:416,30,0	0/0:7,0:7:6.41:0,6,81	0/1:19,0:13:20.22:20,0,138	0/0:15,0:14:21.90:0,22,238	0/0:34,0:34:73.02:0,73,621	0/0:22,0:22:44.98:0,45,512	0/0:16,0:16:21.04:0,21,250	0/0:34,0:34:70.51:0,71,1029	0/0:22,0:22:18.37:0,18,346	0/0:23,0:23:69.03:0,69,652	0/0:23,0:23:47.66:0,48,416	0/0:19,0:19:15.05:0,15,205	0/0:16,0:16:25.74:0,26,280	0/0:16,0:16:47.11:0,47,493	0/0:15,0:15:17.64:0,18,175	0/0:19,0:19:42.07:0,42,416	1/1:2,31:33:60.07:854,60,0	0/0:14,0:14:4.51:0,5,174	0/1:22,0:22:88.88:121,0,89	0/1:14,0:14:22.37:22,0,26	0/0:18,0:18:1.26:0,1,63	0/0:20,0:20:44.90:0,45,464	0/0:22,0:22:25.68:0,26,320	0/0:21,0:21:48.08:0,48,514	0/0:15,0:15:23.99:0,24,240	0/1:29,0:29:80.98:180,0,81	0/1:28,0:27:63.64:64,0,146	0/0:2,0:2:6.01:0,6,79
chr10	93575758	.	G	GGA	5720.93	PASS	AB=0.972;AC=31;AF=0.554;AN=56;BaseQRankSum=-10.427;DP=576;FS=7.645;HRun=0;HaplotypeScore=94.8000;InbreedingCoeff=0.4927;MQ=72.29;MQ0=2;MQRankSum=0.793;QD=15.80;ReadPosRankSum=1.986;VQSLOD=4.0850;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:31.11:0,31,158	1/1:0,1:7:9.03:146,9,0	0/0:19,0:13:9.92:0,10,100	0/0:16,0:15:18.44:0,18,233	1/1:1,26:35:75.15:849,75,0	0/1:20,2:22:32.09:224,0,32	0/1:16,0:16:32.38:51,0,32	0/1:34,0:34:13.70:355,0,14	1/1:1,19:23:28.89:583,29,0	1/1:2,18:23:68.64:676,69,0	1/1:2,17:23:41.22:467,41,0	0/1:19,0:19:4.62:45,0,5	0/1:14,0:16:19.79:70,0,20	0/1:15,0:15:7.23:188,0,7	1/1:1,0:16:17.91:198,18,0	1/1:3,17:20:41.89:677,42,0	0/0:33,0:33:58.48:0,58,282	1/1:6,8:15:5.44:181,5,0	0/0:23,0:23:53.68:0,54,323	0/0:14,0:14:16.38:0,16,196	0/0:18,0:18:16.52:0,17,153	1/1:20,0:20:18.44:186,18,0	1/1:18,1:21:25.68:200,26,0	1/1:18,2:20:33.56:317,34,0	1/1:0,12:15:17.89:289,18,0	0/0:30,0:30:80.98:0,81,473	0/0:29,0:28:75.80:0,76,467	0/1:2,0:2:12.98:18,0,13
chr10	93577125	.	TA	T	4570.07	PASS	AB=0.812;AC=43;AF=0.768;AN=56;BaseQRankSum=9.000;DP=476;FS=2.809;HRun=13;HaplotypeScore=63.7895;InbreedingCoeff=0.5163;MQ=67.34;MQ0=1;MQRankSum=-0.702;QD=11.51;ReadPosRankSum=3.067;VQSLOD=4.8486;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:19:36.84:252,37,0	1/1:0,8:8:23.86:175,24,0	0/1:21,1:16:21.29:21,0,62	0/1:14,0:8:6.20:6,0,45	1/1:2,12:15:31.71:219,32,0	0/1:7,18:25:7.64:277,0,8	1/1:4,11:16:28.83:203,29,0	1/1:7,14:22:34.64:239,35,0	0/1:4,5:11:9.36:89,0,9	1/1:2,13:16:40.81:290,41,0	1/1:8,15:23:26.42:326,26,0	1/1:5,15:21:37.78:269,38,0	1/1:1,9:10:23.85:175,24,0	1/1:3,12:16:34.81:247,35,0	1/1:2,15:17:35.78:263,36,0	1/1:2,15:17:31.86:225,32,0	1/1:3,16:19:15.56:277,16,0	1/1:1,7:8:20.87:153,21,0	0/0:14,0:14:6.64:0,7,213	0/1:25,3:30:2.45:2,0,391	0/0:12,0:12:23.99:0,24,219	1/1:2,9:11:23.77:170,24,0	1/1:5,14:19:8.43:190,8,0	1/1:6,12:18:3.59:190,4,0	1/1:1,11:13:34.84:247,35,0	0/0:16,1:18:13.97:0,14,278	0/0:33,2:35:53.20:0,53,673	1/1:1,5:6:8.94:66,9,0
chr10	93577244	.	GC	G	1275.50	PASS	AB=0.839;AC=19;AF=0.339;AN=56;BaseQRankSum=-6.586;DP=393;FS=3.129;HRun=12;HaplotypeScore=67.1778;InbreedingCoeff=0.4512;MQ=82.47;MQ0=0;MQRankSum=-1.775;QD=7.92;ReadPosRankSum=0.405;VQSLOD=2.5917;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:82.05:0,82,499	0/1:6,1:7:17.24:17,0,18	0/0:20,0:20:3.72:0,4,99	0/1:10,0:10:1.03:1,0,27	0/1:8,0:8:9.84:10,0,56	1/1:7,8:16:8.09:188,8,0	1/1:5,20:26:46.80:354,47,0	0/0:17,0:17:8.06:0,8,56	0/0:9,0:9:12.02:0,12,122	0/1:7,1:8:8.84:18,0,9	0/0:6,0:6:0:0,0,0	1/1:3,9:14:24.98:174,25,0	1/1:1,5:6:12.42:93,12,0	1/1:7,6:14:16.62:121,17,0	0/1:13,0:13:3.13:3,0,111	0/0:12,0:12:25.26:0,25,224	0/0:21,0:21:49.69:0,50,303	0/0:4,0:4:9.02:0,9,91	0/0:20,0:21:48.47:0,48,205	0/0:14,0:14:30.25:0,30,144	0/0:14,0:14:24.11:0,24,100	0/1:2,7:10:5.24:82,0,5	0/1:2,8:10:12.57:93,0,13	1/1:6,13:19:38.82:302,39,0	0/0:11,2:13:8.99:0,9,75	0/0:17,0:17:40.76:0,41,183	0/0:25,0:25:56.95:0,57,243	0/0:5,0:5:8.94:0,9,66
chr10	93577247	.	C	CT	2805.22	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=-11.076;DP=397;FS=2.171;HRun=0;HaplotypeScore=68.8221;InbreedingCoeff=0.7403;MQ=80.50;MQ0=0;MQRankSum=0.280;QD=18.70;ReadPosRankSum=2.221;VQSLOD=5.4793;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:37.28:37,0,69	0/0:8,0:8:20.95:0,21,170	0/0:22,0:21:44.29:0,44,345	0/0:8,0:8:20.36:0,20,162	0/0:9,0:9:24.79:0,25,223	0/0:16,0:16:41.90:0,42,347	0/0:25,0:25:62.79:0,63,487	0/0:17,0:17:19.29:0,19,148	0/0:8,0:8:24.03:0,24,269	0/0:8,0:8:11.95:0,12,103	0/0:6,0:6:11.88:0,12,87	0/0:15,0:15:38.87:0,39,302	0/0:6,0:6:14.95:0,15,117	0/0:13,0:13:11.11:0,11,176	0/0:12,0:12:33.02:0,33,332	0/0:12,0:12:32.09:0,32,346	0/1:21,0:21:42.23:42,0,56	0/0:5,0:5:12.03:0,12,150	1/1:2,21:23:43.35:775,43,0	1/1:1,15:16:35.90:403,36,0	1/1:0,15:15:27.09:357,27,0	0/0:10,0:10:20.94:0,21,179	0/0:11,0:11:20.96:0,21,184	0/0:18,0:18:50.85:0,51,397	0/0:13,0:13:30.02:0,30,290	1/1:1,16:17:9.60:559,10,0	1/1:1,26:27:63.17:810,63,0	0/0:5,0:5:12.46:0,12,102
chr10	93579490	.	A	AG	4881.63	PASS	AB=0.854;AC=40;AF=0.714;AN=56;BaseQRankSum=-3.659;DP=595;FS=219.004;HRun=0;HaplotypeScore=82.9798;InbreedingCoeff=-0.1722;MQ=57.69;MQ0=30;MQRankSum=10.035;QD=8.91;ReadPosRankSum=5.250;VQSLOD=1.0831;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:49.18:317,49,0	0/1:9,0:9:29.64:97,0,30	0/0:47,0:12:6.30:0,6,105	0/1:45,0:15:1.25:1,0,57	0/1:15,21:36:51.22:289,0,51	1/1:14,0:14:31.15:263,31,0	1/1:15,0:14:26.75:203,27,0	0/1:38,0:38:99:264,0,125	0/1:7,0:13:8.92:9,0,40	0/1:12,12:23:44.69:195,0,45	1/1:7,20:27:46.13:359,46,0	1/1:20,0:18:46.91:344,47,0	1/1:8,0:8:16.96:125,17,0	1/1:15,0:14:32.61:262,33,0	0/1:20,0:19:27.37:216,0,27	1/1:18,1:17:2.88:173,3,0	1/1:15,0:15:28.72:258,29,0	0/1:8,0:6:6.02:51,0,6	0/1:17,0:17:16.66:190,0,17	0/1:9,16:25:47.50:177,0,47	1/1:4,0:4:2.87:64,3,0	1/1:8,0:8:7.99:80,8,0	1/1:14,0:11:29.26:229,29,0	1/1:15,0:13:15.40:131,15,0	0/1:35,1:35:29.65:359,0,30	0/1:24,12:35:99:185,0,140	0/1:21,16:35:4.28:4,0,147	0/1:8,0:6:13.99:36,0,14
chr10	93580756	.	A	AT	4037.46	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-14.044;DP=569;FS=1.303;HRun=6;HaplotypeScore=52.0448;InbreedingCoeff=0.9795;MQ=76.31;MQ0=0;MQRankSum=2.199;QD=34.22;ReadPosRankSum=2.219;VQSLOD=3.3430;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:60.13:0,60,612	0/0:7,0:7:21.02:0,21,205	0/0:15,0:15:42.04:0,42,412	0/0:7,0:7:8.23:0,8,68	0/0:29,0:29:84.19:0,84,857	0/0:24,0:24:66.15:0,66,673	0/0:18,0:18:54.12:0,54,551	0/0:28,0:28:78.17:0,78,791	0/0:21,0:21:63.14:0,63,642	0/0:22,0:22:57.12:0,57,581	0/0:20,0:20:54.12:0,54,551	0/0:21,0:21:60.14:0,60,612	0/0:14,0:14:39.09:0,39,398	0/0:19,0:19:54.12:0,54,551	0/0:18,0:18:51.11:0,51,520	0/0:14,0:14:39.09:0,39,398	0/0:32,0:32:84.19:0,84,857	0/0:20,0:20:51.12:0,51,520	1/1:2,17:19:51.16:641,51,0	1/1:2,29:31:87.28:1095,87,0	1/1:1,5:6:15.05:189,15,0	0/0:16,0:16:45.10:0,45,459	0/0:20,0:20:57.13:0,57,581	0/0:16,0:15:36.08:0,36,367	0/0:31,0:31:81.18:0,81,826	1/1:1,39:40:99:1433,114,0	1/1:3,19:22:54.17:679,54,0	0/0:12,0:12:36.08:0,36,366
chr10	93583057	.	T	TACACAC	17318.25	PASS	AB=0.553;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.186;DP=601;FS=4.464;HRun=0;HaplotypeScore=141.4822;InbreedingCoeff=0.6733;MQ=64.04;MQ0=3;MQRankSum=-4.789;QD=32.19;ReadPosRankSum=2.647;VQSLOD=4.7104;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:46:53.50:696,53,0	1/1:0,9:9:18.06:596,18,0	0/0:26,0:20:15.04:0,15,263	0/0:37,0:31:40.27:0,40,656	1/1:5,11:18:23.81:733,24,0	0/1:4,0:21:26.95:404,0,27	1/1:7,0:17:27.09:349,27,0	1/1:20,6:28:36.11:755,36,0	1/1:2,9:13:36.12:1111,36,0	1/1:13,11:28:63.19:1734,63,0	1/1:5,8:15:26.76:701,27,0	1/1:5,0:12:18.06:232,18,0	1/1:6,0:19:39.13:500,39,0	1/1:5,0:20:30.10:387,30,0	1/1:7,15:23:45.15:1490,45,0	1/1:6,9:21:36.12:999,36,0	1/1:13,0:35:51.17:704,51,0	1/1:2,2:4:6.02:199,6,0	1/1:12,0:17:21.07:270,21,0	1/1:8,0:25:45.15:590,45,0	1/1:15,0:36:54.18:726,54,0	1/1:3,0:13:18.06:233,18,0	1/1:5,7:13:20.89:693,21,0	1/1:8,16:25:24.08:794,24,0	1/1:11,15:30:44.50:1367,45,0	1/1:3,0:19:48.14:644,48,0	1/1:7,0:19:24.08:310,24,0	1/1:3,3:7:3.01:99,3,0
chr10	93584342	.	TAA	T	6910.10	PASS	AB=0.917;AC=39;AF=0.696;AN=56;BaseQRankSum=-9.458;DP=489;FS=15.914;HRun=13;HaplotypeScore=69.3212;InbreedingCoeff=0.8593;MQ=71.06;MQ0=1;MQRankSum=-2.436;QD=20.03;ReadPosRankSum=4.385;VQSLOD=2.4323;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:12:30.06:0,30,316	1/1:0,7:7:15.02:145,15,0	0/0:10,0:7:3.76:0,4,17	0/1:10,0:10:12.18:54,0,12	1/1:4,32:40:80.35:850,80,0	1/1:2,18:21:45.88:488,46,0	1/1:4,10:15:17.73:157,18,0	1/1:9,18:28:50.65:466,51,0	1/1:2,16:18:42.05:407,42,0	1/1:2,13:15:39.04:373,39,0	1/1:4,17:21:41.95:407,42,0	1/1:2,8:10:21.02:204,21,0	1/1:2,18:20:39.04:378,39,0	1/1:3,11:14:23.99:233,24,0	1/1:0,14:14:39.06:378,39,0	1/1:3,18:21:45.01:436,45,0	0/0:3,0:17:36.06:0,36,356	1/1:1,14:15:36.04:349,36,0	0/0:5,0:22:60.08:0,60,619	0/0:9,0:28:62.95:0,63,603	0/0:2,0:8:14.99:0,15,135	1/1:4,14:18:39.03:378,39,0	1/1:4,12:16:29.99:291,30,0	1/1:0,10:10:24.04:233,24,0	1/1:3,24:28:68.83:652,69,0	0/0:7,0:19:41.96:0,42,386	0/0:7,0:27:51.05:0,51,494	1/1:2,1:2:2.99:29,3,0
chr10	93586067	.	GGA	G	14353.23	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=11.288;DP=579;FS=19.340;HRun=0;HaplotypeScore=74.0595;InbreedingCoeff=0.9979;MQ=74.45;MQ0=0;MQRankSum=-2.253;QD=37.28;ReadPosRankSum=1.843;VQSLOD=5.0301;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.23:0,66,1168	1/1:0,6:6:18.06:252,18,0	0/0:15,0:14:30.10:0,30,497	0/0:23,0:24:47.74:0,48,806	1/1:0,22:22:57.19:796,57,0	1/1:1,20:21:57.19:798,57,0	1/1:2,13:15:33.11:462,33,0	1/1:5,25:30:75.25:1046,75,0	1/1:1,17:18:48.16:672,48,0	1/1:5,20:25:60.20:839,60,0	1/1:3,26:29:68.84:966,69,0	1/1:0,16:16:45.15:630,45,0	1/1:1,29:30:81.27:1128,81,0	1/1:1,25:26:75.25:1048,75,0	1/1:1,30:31:87.29:1218,87,0	1/1:0,25:25:69.23:967,69,0	0/0:18,0:18:51.17:0,51,902	1/1:1,16:17:48.16:672,48,0	0/0:20,0:20:57.17:0,57,996	0/0:24,0:24:66.20:0,66,1145	0/0:17,0:17:48.16:0,48,859	1/1:0,14:14:39.13:546,39,0	1/1:1,17:18:51.17:714,51,0	1/1:0,11:11:33.11:462,33,0	1/1:1,23:24:60.20:840,60,0	0/0:24,0:24:72.24:0,72,1263	0/0:29,0:28:78.27:0,78,1403	1/1:0,7:7:21.07:294,21,0
chr10	93587207	.	A	ACC	2787.16	PASS	AB=1.000;AC=23;AF=0.426;AN=54;BaseQRankSum=-1.273;DP=407;FS=6.188;HRun=3;HaplotypeScore=68.1826;InbreedingCoeff=0.8832;MQ=46.33;MQ0=31;MQRankSum=1.226;QD=18.34;ReadPosRankSum=0.672;VQSLOD=0.7619;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:21:42.08:0,42,490	1/1:7,0:7:18.01:187,18,0	./.	0/0:15,0:9:6.36:0,6,51	1/1:23,0:23:32.96:333,33,0	0/0:16,0:14:29.94:0,30,319	0/0:15,0:13:27.08:0,27,332	1/1:10,10:18:45.09:518,45,0	1/1:8,0:7:11.76:128,12,0	1/1:17,0:17:47.39:522,47,0	1/1:11,0:11:21:220,21,0	0/0:9,0:9:24.06:0,24,279	0/0:9,0:9:24.02:0,24,264	0/0:12,0:12:30.08:0,30,359	1/1:18,0:17:25.55:348,26,0	1/1:9,0:9:20.97:261,21,0	0/0:21,0:19:45.09:0,45,526	1/1:11,0:6:5.99:64,6,0	0/0:30,0:26:69.15:0,69,855	0/0:21,0:20:45.14:0,45,561	0/0:11,0:9:12.04:0,12,154	0/0:13,0:12:27.08:0,27,335	0/0:14,0:14:35.30:0,35,388	0/0:10,0:8:18.01:0,18,204	1/1:9,0:9:22.25:237,22,0	0/1:11,0:11:9.47:9,0,249	0/0:17,0:15:33.05:0,33,395	1/1:7,0:4:12.03:173,12,0
chr10	93589361	.	TA	T	3607.26	PASS	AB=0.738;AC=37;AF=0.661;AN=56;BaseQRankSum=-1.946;DP=484;FS=4.460;HRun=14;HaplotypeScore=61.2500;InbreedingCoeff=0.7650;MQ=79.02;MQ0=1;MQRankSum=-1.126;QD=11.13;ReadPosRankSum=4.548;VQSLOD=3.4641;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:62.89:0,63,566	1/1:1,5:6:11.08:80,11,0	0/0:26,0:13:19.61:0,20,134	0/1:14,0:12:5.30:5,0,72	1/1:16,25:41:28.25:391,28,0	1/1:6,24:32:66.49:443,66,0	1/1:3,6:9:14.85:103,15,0	1/1:8,16:26:23.72:285,24,0	1/1:3,3:6:8.90:62,9,0	1/1:8,13:22:16.84:247,17,0	0/1:9,21:33:28.54:312,0,29	0/1:6,8:15:0.03:128,0,0	1/1:5,8:14:28.37:180,28,0	1/1:2,7:10:17.83:123,18,0	1/1:3,6:9:19.85:129,20,0	1/1:1,9:10:26.78:185,27,0	0/0:18,1:22:30.14:0,30,394	1/1:4,11:16:31.75:211,32,0	0/0:7,0:16:40.31:0,40,239	0/0:7,0:13:29:0,29,174	0/0:2,0:6:8.68:0,9,57	1/1:5,3:9:10.90:67,11,0	1/1:2,12:14:29.70:205,30,0	1/1:4,7:11:23.77:164,24,0	1/1:5,11:17:6.90:184,7,0	0/0:8,0:25:44.75:0,45,263	0/0:11,0:21:52.23:0,52,339	1/1:4,5:9:14.85:103,15,0
chr10	93592368	.	G	GA	12585.45	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-16.797;DP=672;FS=18.777;HRun=7;HaplotypeScore=64.6599;InbreedingCoeff=0.9974;MQ=77.37;MQ0=0;MQRankSum=-2.722;QD=30.47;ReadPosRankSum=1.952;VQSLOD=3.2846;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.08:0,57,545	1/1:2,6:8:18.01:201,18,0	0/0:23,0:22:56.34:0,56,502	0/0:27,0:27:51.50:0,51,490	1/1:2,25:27:75.19:890,75,0	1/1:2,21:23:60.17:713,60,0	1/1:2,19:21:54.17:652,54,0	1/1:1,22:23:66.19:785,66,0	1/1:2,20:22:48.15:580,48,0	1/1:5,19:24:57.17:689,57,0	1/1:4,25:29:72.22:870,72,0	1/1:1,18:19:51.16:616,51,0	1/1:1,16:17:45.14:544,45,0	1/1:1,27:28:75.23:906,75,0	1/1:2,24:26:63.16:746,63,0	1/1:1,25:25:75.23:906,75,0	0/0:34,0:34:89.88:0,90,869	1/1:5,5:10:17.99:199,18,0	0/0:27,0:27:63.08:0,63,603	0/0:36,0:36:99:0,102,985	0/0:25,0:25:72.10:0,72,690	1/1:1,16:17:39.12:471,39,0	1/1:4,20:24:57.17:682,57,0	1/1:1,23:24:66.20:797,66,0	1/1:3,18:21:48.15:580,48,0	0/0:38,0:38:99:0,99,956	0/0:29,0:29:87.12:0,87,834	1/1:1,23:24:63.19:759,63,0
chr10	93593079	.	T	TA	12199.59	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-6.774;DP=527;FS=11.924;HRun=9;HaplotypeScore=54.5228;InbreedingCoeff=0.3418;MQ=79.80;MQ0=0;MQRankSum=-4.366;QD=24.01;ReadPosRankSum=2.549;VQSLOD=5.0524;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,14:20:35.93:379,36,0	1/1:0,2:2:6.02:66,6,0	0/1:22,0:21:33.96:34,0,190	0/0:17,1:15:3.53:0,4,107	1/1:2,32:35:66.93:921,67,0	1/1:5,23:28:37.12:638,37,0	1/1:1,7:8:15.04:166,15,0	1/1:7,20:27:37.10:627,37,0	1/1:8,14:23:18.97:422,19,0	1/1:5,19:24:34.11:603,34,0	1/1:3,21:24:63.09:668,63,0	1/1:4,16:20:22.08:472,22,0	1/1:0,12:12:30.08:331,30,0	1/1:3,11:15:3.98:272,4,0	1/1:2,17:19:42.11:465,42,0	1/1:4,9:13:4.04:273,4,0	1/1:1,23:25:66.17:722,66,0	1/1:1,7:8:21.06:232,21,0	1/1:4,12:16:36.09:394,36,0	1/1:4,30:34:66.95:923,67,0	1/1:0,6:6:18.05:199,18,0	1/1:2,16:18:19.07:439,19,0	1/1:2,15:17:45.12:498,45,0	1/1:3,11:14:30.08:332,30,0	1/1:1,19:20:54.15:597,54,0	1/1:1,25:26:75.17:812,75,0	1/1:1,25:25:54.11:582,54,0	1/1:1,5:6:12.03:133,12,0
chr10	93593725	.	T	TA	4419.60	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-8.995;DP=694;FS=1.623;HRun=5;HaplotypeScore=143.7228;InbreedingCoeff=0.9487;MQ=73.95;MQ0=0;MQRankSum=1.051;QD=33.23;ReadPosRankSum=-1.404;VQSLOD=2.3551;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,120,715	0/0:7,0:7:17.32:0,17,93	0/0:25,0:25:43.34:0,43,196	0/0:25,0:25:9.19:0,9,185	0/0:22,0:22:58.09:0,58,340	0/0:19,0:19:47.47:0,47,268	0/0:21,0:21:24.26:0,24,224	0/0:26,0:26:68.14:0,68,338	0/0:32,0:32:62.28:0,62,446	0/0:27,0:27:41.92:0,42,342	0/0:26,0:26:63.44:0,63,351	0/0:29,0:29:63.98:0,64,360	0/0:33,0:33:89.95:0,90,522	0/0:33,0:33:86.94:0,87,499	0/0:36,0:35:95.84:0,96,529	0/0:26,0:26:42.75:0,43,337	0/0:29,0:29:41.95:0,42,343	0/0:9,0:9:3.60:0,4,110	1/1:3,21:24:63.20:814,63,0	1/1:4,20:24:44.42:734,44,0	1/1:2,32:34:90.29:1164,90,0	0/0:15,0:15:43:0,43,221	0/0:13,0:13:37.56:0,38,201	0/0:28,0:28:78.40:0,78,438	0/0:23,0:23:63.47:0,63,342	1/1:3,21:24:63.20:812,63,0	1/1:2,25:27:69.22:896,69,0	0/0:12,0:12:26.47:0,26,169
chr10	93593923	.	TA	T	1795.74	PASS	AB=0.700;AC=25;AF=0.446;AN=56;BaseQRankSum=4.904;DP=545;FS=23.639;HRun=15;HaplotypeScore=80.0704;InbreedingCoeff=0.3417;MQ=71.98;MQ0=1;MQRankSum=2.433;QD=5.28;ReadPosRankSum=5.518;VQSLOD=0.6173;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:16:17.28:0,17,93	0/1:7,2:11:12.59:49,0,13	0/0:24,0:20:3.61:0,4,46	0/1:14,0:10:1.50:1,0,13	1/1:10,20:34:4.29:270,4,0	0/0:17,0:23:42.57:0,43,332	0/0:17,0:17:32.96:0,33,279	1/1:9,20:30:9.65:301,10,0	0/1:6,8:14:5.78:95,0,6	0/1:16,14:30:7.02:194,0,7	0/1:10,14:24:43.88:167,0,44	0/0:21,1:22:27.02:0,27,317	0/0:16,1:18:11.32:0,11,193	0/0:19,0:20:32.77:0,33,264	1/1:3,11:16:25.66:160,26,0	0/1:9,9:19:7.39:66,0,7	0/0:14,0:15:40.81:0,41,245	1/1:1,2:3:5.89:38,6,0	1/1:13,1:22:23.25:77,23,0	1/1:9,0:26:28.06:82,28,0	0/1:5,0:9:10.34:16,0,10	0/0:15,0:15:26.81:0,27,220	0/0:17,2:23:0.04:0,0,216	0/0:11,1:12:7.76:0,8,188	0/1:8,6:14:2.99:111,0,3	1/1:5,0:25:29.48:87,29,0	1/1:7,0:28:37.32:109,37,0	0/1:7,10:19:58.33:159,0,58
chr10	93594089	.	G	GA	7645.34	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-14.487;DP=634;FS=6.532;HRun=8;HaplotypeScore=57.4856;InbreedingCoeff=0.9821;MQ=75.28;MQ0=0;MQRankSum=-0.488;QD=28.21;ReadPosRankSum=-0.345;VQSLOD=5.1437;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:59.94:0,60,532	1/1:1,10:11:24.96:279,25,0	0/0:18,0:18:29.97:0,30,266	0/0:11,0:11:15.55:0,16,173	1/1:5,36:41:99:1148,102,0	0/0:31,1:32:52.39:0,52,724	0/0:10,0:10:30:0,30,270	1/1:5,48:53:99:1618,144,0	1/1:3,14:17:39.12:450,39,0	1/1:3,27:30:84.23:957,84,0	1/1:4,22:26:66.15:747,66,0	0/0:18,0:18:45.02:0,45,412	0/0:25,0:25:75.01:0,75,679	0/0:20,0:22:56.05:0,56,496	1/1:3,25:28:57.17:658,57,0	1/1:2,13:15:39.12:450,39,0	0/0:15,0:15:23.81:0,24,219	1/1:1,15:16:33.10:377,33,0	0/0:21,0:21:59.98:0,60,534	0/0:26,0:26:75.04:0,75,686	0/0:10,0:10:30.02:0,30,275	0/0:18,0:18:45.02:0,45,412	0/0:33,0:33:84.01:0,84,761	0/0:13,0:13:39.01:0,39,352	1/1:2,28:30:78.22:893,78,0	0/0:28,0:28:69.03:0,69,631	0/0:41,0:41:99:0,114,1034	1/1:2,2:4:6.02:69,6,0
chr10	93595405	.	G	GA	1644.20	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-10.952;DP=603;FS=1.793;HRun=8;HaplotypeScore=57.3849;InbreedingCoeff=0.9672;MQ=67.46;MQ0=0;MQRankSum=-0.912;QD=26.10;ReadPosRankSum=0.554;VQSLOD=4.3783;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,31:36:87.26:1004,87,0	0/0:5,0:5:12.01:0,12,110	0/0:12,0:11:26.98:0,27,240	0/0:14,0:10:23.93:0,24,207	0/0:34,0:34:87.02:0,87,791	0/0:21,0:21:54.02:0,54,494	0/0:19,0:19:45.01:0,45,407	0/0:26,0:26:63.01:0,63,573	0/0:14,0:14:39.02:0,39,357	0/0:30,0:30:50.60:0,51,631	0/0:25,0:25:66.03:0,66,600	0/0:24,0:24:69.03:0,69,631	0/0:29,0:29:75:0,75,677	0/0:13,0:13:33:0,33,298	0/0:23,0:23:69.04:0,69,631	0/0:21,0:20:51.01:0,51,462	1/1:3,24:27:66.20:762,66,0	0/0:15,0:15:38.68:0,39,337	0/0:22,0:22:59.99:0,60,534	0/0:33,0:32:90.05:0,90,824	0/0:19,0:19:45.01:0,45,412	0/0:17,0:17:48.03:0,48,439	0/0:21,0:21:50.70:0,51,462	0/0:17,0:17:48.03:0,48,438	0/0:17,0:17:42.02:0,42,384	0/0:38,0:38:98.94:0,99,889	0/0:27,0:27:69.02:0,69,627	0/0:4,0:4:12.01:0,12,110
chr10	93596017	.	A	AG	1865.53	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.220;DP=691;FS=0.000;HRun=2;HaplotypeScore=70.9324;InbreedingCoeff=0.9875;MQ=79.98;MQ0=0;MQRankSum=-4.395;QD=37.31;ReadPosRankSum=1.627;VQSLOD=4.2617;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:75.25:1080,75,0	0/0:12,0:12:36.11:0,36,446	0/0:18,0:18:33.16:0,33,502	0/0:16,0:16:33.08:0,33,381	0/0:30,0:30:90.27:0,90,1103	0/0:26,0:26:69.20:0,69,843	0/0:21,0:21:57.18:0,57,706	0/0:39,0:39:99:0,108,1330	0/0:18,0:18:54.14:0,54,644	0/0:38,0:38:99:0,111,1367	0/0:20,0:20:57.18:0,57,707	0/0:31,0:31:84.26:0,84,1040	0/0:27,0:27:78.24:0,78,964	0/0:21,0:21:60.19:0,60,743	0/0:31,0:31:90.24:0,90,1097	0/0:31,0:31:93.29:0,93,1153	1/1:0,23:23:63.21:907,63,0	0/0:7,0:7:15.05:0,15,186	0/0:23,0:23:66.20:0,66,804	0/0:39,0:39:99:0,114,1384	0/0:21,0:21:60.19:0,60,744	0/0:16,0:16:45.12:0,45,544	0/0:28,0:28:81.25:0,81,1004	0/0:18,0:18:54.17:0,54,669	0/0:23,0:23:69.20:0,69,841	0/0:46,0:46:99:0,126,1542	0/0:35,0:35:96.30:0,96,1189	0/0:6,0:6:18.06:0,18,223
chr10	93597140	.	AC	A	699.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.340;DP=501;FS=8.422;HRun=7;HaplotypeScore=82.5276;InbreedingCoeff=0.9755;MQ=76.60;MQ0=0;MQRankSum=-1.654;QD=22.58;ReadPosRankSum=-0.343;VQSLOD=2.9286;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.02:0,69,814	0/0:6,0:6:15.03:0,15,174	0/0:22,0:22:51.54:0,52,588	0/0:17,1:19:24.22:0,24,275	0/0:21,0:21:63.02:0,63,717	0/0:17,0:17:45.12:0,45,540	1/1:4,27:31:78.17:795,78,0	0/0:18,0:18:45.10:0,45,516	0/0:15,0:15:39.09:0,39,453	0/0:19,0:19:54.17:0,54,670	0/0:13,0:13:39.10:0,39,466	0/0:12,0:12:33.04:0,33,372	0/0:20,0:20:57.14:0,57,683	0/0:20,0:20:54.15:0,54,644	0/0:24,0:24:63.19:0,63,778	0/0:29,0:29:84.23:0,84,1018	0/0:25,0:25:66.18:0,66,793	0/0:9,0:9:24.08:0,24,302	0/0:19,0:19:45.14:0,45,554	0/0:19,0:19:54.16:0,54,663	0/0:15,0:15:33.11:0,33,413	0/0:13,0:13:33.09:0,33,391	0/0:17,0:17:48.13:0,48,579	0/0:13,0:13:39.08:0,39,441	0/0:14,0:14:42.12:0,42,515	0/0:15,0:15:33.11:0,33,415	0/0:21,0:21:60.17:0,60,730	0/0:7,0:7:21.07:0,21,264
chr10	93597644	.	G	GA	12208.60	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-6.642;DP=469;FS=7.873;HRun=6;HaplotypeScore=65.5979;InbreedingCoeff=0.6018;MQ=82.57;MQ0=3;MQRankSum=-6.001;QD=28.52;ReadPosRankSum=5.645;VQSLOD=5.0813;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:6,15:21:51.16:639,51,0	1/1:0,7:7:18.06:227,18,0	0/0:41,0:26:19.08:0,19,329	0/1:37,0:25:29.87:30,0,260	1/1:6,20:26:26.55:630,27,0	1/1:4,15:19:48.09:568,48,0	1/1:4,9:13:30.09:373,30,0	1/1:5,19:24:57.16:700,57,0	1/1:2,9:11:15.05:189,15,0	1/1:3,15:18:48.14:592,48,0	1/1:1,20:21:57.18:710,57,0	1/1:6,15:21:57.64:699,58,0	1/1:3,12:15:39.12:484,39,0	1/1:2,6:8:21.07:263,21,0	1/1:0,23:23:57.18:719,57,0	1/1:1,5:6:12.04:151,12,0	1/1:3,11:14:33.06:397,33,0	1/1:3,13:16:42.13:529,42,0	1/1:3,10:13:30.06:347,30,0	1/1:1,19:20:54.17:677,54,0	1/1:0,6:6:18.06:224,18,0	1/1:1,10:11:33.10:400,33,0	1/1:1,13:15:45.14:558,45,0	1/1:1,5:6:15.05:189,15,0	1/1:2,16:18:42.13:530,42,0	1/1:0,16:16:48.14:591,48,0	1/1:0,16:16:45.14:568,45,0	1/1:1,6:7:18.06:227,18,0
chr10	93597663	.	TA	T	2616.44	PASS	AB=0.964;AC=21;AF=0.375;AN=56;BaseQRankSum=7.652;DP=436;FS=4.434;HRun=9;HaplotypeScore=86.0469;InbreedingCoeff=0.8971;MQ=73.82;MQ0=1;MQRankSum=-9.648;QD=16.77;ReadPosRankSum=0.961;VQSLOD=3.9081;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,15:20:41.99:378,42,0	0/0:7,0:7:21.04:0,21,228	0/1:24,1:18:27.31:27,0,120	0/0:28,0:20:35.10:0,35,439	0/0:23,0:23:69.20:0,69,794	1/1:1,18:19:54.03:494,54,0	1/1:3,5:8:18:164,18,0	0/0:24,0:24:66.14:0,66,731	0/0:9,0:9:15.04:0,15,173	0/0:18,1:19:26.69:0,27,561	0/0:20,0:20:48.14:0,48,554	1/1:3,17:20:22.30:454,22,0	1/1:2,12:14:33.01:302,33,0	1/1:0,8:8:18.01:164,18,0	0/0:25,0:25:66.18:0,66,749	0/0:10,0:10:24.07:0,24,277	1/1:3,9:12:27.01:247,27,0	0/0:17,1:18:17.61:0,18,420	0/0:16,0:16:42.11:0,42,474	0/0:16,0:16:45.12:0,45,508	0/0:6,0:6:15.52:0,16,174	1/1:2,8:10:24:220,24,0	1/1:2,12:14:36.02:329,36,0	1/1:2,2:4:6:55,6,0	0/0:18,0:18:48.14:0,48,554	0/0:19,0:19:57.17:0,57,658	0/0:16,0:16:42.12:0,42,476	0/0:6,0:6:18.05:0,18,208
chr10	93597747	.	T	TTG	619.66	PASS	AB=0.692;AC=11;AF=0.196;AN=56;BaseQRankSum=1.898;DP=424;FS=1.248;HRun=0;HaplotypeScore=93.6483;InbreedingCoeff=0.0668;MQ=76.03;MQ0=0;MQRankSum=-2.300;QD=4.66;ReadPosRankSum=-2.610;VQSLOD=2.0928;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:18:42.10:0,42,594	0/0:2,0:10:12.12:0,12,81	0/0:18,0:17:27.04:0,27,500	0/0:13,0:13:3.74:0,4,138	0/0:8,0:24:32.20:0,32,155	0/1:13,0:20:94.17:131,0,94	0/1:7,0:18:70.72:71,0,97	0/1:11,0:21:99:102,0,110	0/0:1,0:15:24.76:0,25,108	0/0:4,0:12:16.22:0,16,91	0/0:2,0:14:16.36:0,16,60	1/1:7,0:13:2.06:156,2,0	0/1:8,0:11:0.53:79,0,1	0/1:1,0:8:9.67:16,0,10	0/0:3,0:22:18.70:0,19,115	0/0:4,0:13:24.59:0,25,118	0/0:20,0:20:50.09:0,50,737	0/0:4,0:18:30.13:0,30,168	0/0:4,0:9:20.16:0,20,134	0/0:5,0:20:2.86:0,3,69	0/0:1,0:10:16.08:0,16,44	0/1:4,0:5:12.29:12,0,33	0/1:11,0:13:29.45:59,0,29	0/1:1,1:13:4.85:117,0,5	0/0:3,0:19:6.82:0,7,91	0/0:10,0:21:21.09:0,21,236	0/0:3,0:15:1.76:0,2,99	0/1:5,0:11:0.66:17,0,1
chr10	93600736	.	T	TC	72.90	PASS	AB=0.879;AC=7;AF=0.130;AN=54;BaseQRankSum=-3.864;DP=207;FS=4.937;HRun=0;HaplotypeScore=45.4568;InbreedingCoeff=-0.0055;MQ=41.05;MQ0=21;MQRankSum=0.701;QD=1.58;ReadPosRankSum=-2.000;VQSLOD=0.9054;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:8:3.01:0,3,34	0/0:2,0:1:3.01:0,3,34	0/0:15,0:5:15.04:0,15,192	0/0:23,0:7:18.02:0,18,203	0/0:4,0:4:0:0,0,0	0/1:4,1:4:38.06:38,0,56	0/0:11,0:9:15.04:0,15,160	0/1:8,1:9:23.57:24,0,203	0/0:7,0:7:18.47:0,18,184	0/0:6,0:6:17.55:0,18,146	0/0:3,0:3:3.01:0,3,34	0/1:15,1:15:23.13:23,0,237	0/0:2,0:2:6.02:0,6,69	0/0:7,0:6:6.42:0,6,97	0/0:1,0:1:3.01:0,3,34	0/0:4,0:4:6.52:0,7,99	0/0:12,0:12:33.08:0,33,344	0/1:7,1:8:28.63:29,0,150	0/0:11,0:10:25.31:0,25,265	0/0:2,0:2:3.01:0,3,31	0/0:12,0:8:12.03:0,12,128	1/1:2,1:2:3.01:47,3,0	0/0:3,0:3:3.01:0,3,35	0/0:9,0:9:11.97:0,12,127	0/0:11,0:11:30.02:0,30,308	0/1:4,1:5:32.59:33,0,112	0/0:5,0:5:12.02:0,12,124	./.
chr10	93600739	.	A	AGCA	4514.51	PASS	AB=1.000;AC=46;AF=0.852;AN=54;BaseQRankSum=-3.470;DP=214;FS=17.055;HRun=0;HaplotypeScore=36.4995;InbreedingCoeff=0.3688;MQ=42.93;MQ0=17;MQRankSum=1.888;QD=26.25;ReadPosRankSum=2.568;VQSLOD=2.7069;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,7:11:3.01:35,3,0	1/1:2,0:1:3.01:36,3,0	0/0:15,0:5:3.05:0,3,177	0/0:23,0:7:17.07:0,17,214	1/1:4,0:4:6.01:75,6,0	0/1:5,0:4:3.41:75,0,3	1/1:10,0:9:18.06:259,18,0	1/1:10,0:10:10.85:308,11,0	1/1:6,0:6:17.85:220,18,0	1/1:6,0:6:18.06:299,18,0	1/1:3,0:3:3.01:36,3,0	1/1:17,0:16:16.29:362,16,0	1/1:2,0:2:6.02:71,6,0	1/1:6,0:5:12.02:155,12,0	1/1:2,0:2:3.01:36,3,0	1/1:4,0:4:12.04:157,12,0	1/1:13,0:13:33.11:522,33,0	1/1:9,0:9:7.28:283,7,0	1/1:12,0:12:23.11:337,23,0	1/1:2,0:2:3.01:50,3,0	1/1:11,0:7:15.05:237,15,0	0/0:2,0:2:2.74:0,3,12	1/1:4,0:4:3.01:34,3,0	1/1:10,0:10:14.77:208,15,0	1/1:13,0:13:30.04:411,30,0	0/1:5,0:5:1.17:179,0,1	1/1:5,0:5:9.03:131,9,0	./.
chr10	93601129	.	G	GT	6802.57	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-13.969;DP=611;FS=0.704;HRun=1;HaplotypeScore=57.7447;InbreedingCoeff=0.9986;MQ=91.67;MQ0=0;MQRankSum=-3.443;QD=41.48;ReadPosRankSum=1.508;VQSLOD=5.3425;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:72.24:1079,72,0	0/0:8,0:8:21.07:0,21,270	0/0:19,0:19:51.15:0,51,639	0/0:32,0:32:89.78:0,90,1132	0/0:29,0:29:87.28:0,87,1129	0/0:27,0:27:78.24:0,78,997	0/0:12,0:12:36.12:0,36,468	0/0:35,0:35:99:0,105,1314	0/0:23,0:23:69.19:0,69,867	0/0:36,0:36:99:0,108,1400	0/0:26,0:26:75.22:0,75,944	0/0:20,0:20:57.16:0,57,723	0/0:30,0:30:87.25:0,87,1105	0/0:16,0:16:45.15:0,45,584	0/0:22,0:22:66.19:0,66,841	0/0:21,0:21:57.18:0,57,740	1/1:1,18:19:42.14:629,42,0	0/0:9,0:9:27.09:0,27,351	1/1:0,21:21:63.21:941,63,0	1/1:0,23:23:66.19:965,66,0	1/1:0,11:11:30.10:449,30,0	0/0:9,0:9:27.06:0,27,322	0/0:19,0:19:57.16:0,57,724	0/0:21,0:21:63.19:0,63,802	0/0:23,0:23:63.20:0,63,818	1/1:0,28:28:84.28:1256,84,0	1/1:1,34:35:99:1483,99,0	0/0:10,0:10:27.09:0,27,346
chr10	93602526	.	T	TA	2322.29	PASS	AB=0.719;AC=33;AF=0.589;AN=56;BaseQRankSum=1.975;DP=544;FS=8.142;HRun=14;HaplotypeScore=78.8020;InbreedingCoeff=0.6994;MQ=69.71;MQ0=0;MQRankSum=-0.658;QD=6.47;ReadPosRankSum=-4.480;VQSLOD=1.1673;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,3:24:23.55:134,24,0	0/0:10,0:10:17.68:0,18,115	0/0:4,0:6:4.18:0,4,22	0/0:12,0:12:12.01:0,12,73	0/0:27,0:30:52.80:0,53,322	1/1:14,8:23:16.19:219,16,0	1/1:6,9:16:8.83:65,9,0	1/1:15,9:25:26.78:214,27,0	0/0:16,0:21:33.82:0,34,192	0/0:26,0:27:28.40:0,28,178	0/0:15,0:19:21.57:0,22,127	1/1:8,14:22:4.63:155,5,0	1/1:2,9:11:12:106,12,0	1/1:3,16:19:15:132,15,0	0/0:21,0:23:33.38:0,33,204	0/0:19,0:20:46.22:0,46,293	1/1:3,2:28:22.29:111,22,0	0/0:17,0:17:29.44:0,29,190	1/1:8,1:13:14.21:72,14,0	1/1:10,1:30:57.77:333,58,0	1/1:2,0:9:8.52:43,9,0	0/1:6,12:18:21.17:132,0,21	1/1:5,9:14:11.99:106,12,0	0/1:4,6:11:13.27:20,0,13	0/1:13,1:17:20.52:21,0,98	1/1:8,1:30:56.85:353,57,0	1/1:12,1:33:26.79:134,27,0	1/1:5,9:16:10.38:185,10,0
chr10	93604790	.	TACACAC	T	209.58	PASS	AC=10;AF=0.357;AN=28;BaseQRankSum=1.961;DP=282;FS=2.634;HRun=0;HaplotypeScore=61.4657;InbreedingCoeff=0.5069;MQ=69.39;MQ0=13;MQRankSum=-0.539;QD=4.87;ReadPosRankSum=2.354;VQSLOD=1.2005;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:6.02:0,6,104	./.	./.	0/0:20,0:11:0.47:0,0,1	0/0:11,0:11:3.01:0,3,38	./.	./.	0/0:27,0:26:0.89:0,1,2	1/1:14,0:14:2.69:60,3,0	./.	./.	./.	./.	./.	1/1:7,1:9:6.02:105,6,0	1/1:3,2:5:3.01:60,3,0	0/0:11,0:12:12.04:0,12,293	1/1:8,0:7:3.01:31,3,0	./.	0/0:9,0:8:3.01:0,3,96	0/0:30,0:27:13.06:0,13,315	./.	./.	./.	1/1:6,1:7:3.01:59,3,0	0/0:12,0:12:14.96:0,15,367	0/0:7,0:7:9.03:0,9,234	./.
chr10	93604864	.	G	GGA	1793.71	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-7.125;DP=379;FS=5.448;HRun=0;HaplotypeScore=61.5566;InbreedingCoeff=0.8047;MQ=70.87;MQ0=10;MQRankSum=0.821;QD=25.62;ReadPosRankSum=1.136;VQSLOD=4.1526;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:1.16:0,1,239	0/0:4,0:4:12.04:0,12,156	0/0:48,0:26:54.76:0,55,636	0/0:72,0:37:60.18:0,60,760	0/0:16,0:16:27.09:0,27,358	0/0:4,0:4:9.03:0,9,119	0/0:8,0:8:11.97:0,12,145	0/0:15,0:15:36.09:0,36,448	0/0:12,0:12:12.04:0,12,159	0/0:12,0:12:30.09:0,30,372	0/0:16,0:16:30.02:0,30,368	0/0:9,0:9:20.95:0,21,278	0/0:2,0:2:3.01:0,3,40	0/0:5,0:4:9.03:0,9,119	0/0:17,0:17:45.09:0,45,577	0/0:11,0:11:27.05:0,27,339	0/0:14,0:14:24.07:0,24,304	0/0:6,0:6:15.05:0,15,199	1/1:3,8:10:21.07:349,21,0	1/1:2,8:9:21.02:329,21,0	1/1:10,9:18:18.04:310,18,0	0/0:5,0:4:9.03:0,9,119	0/0:6,0:6:12.04:0,12,159	0/0:6,0:5:12.04:0,12,158	0/0:9,0:9:24.08:0,24,318	1/1:4,12:15:32.93:492,33,0	1/1:2,11:13:30.06:484,30,0	0/0:1,0:1:3.01:0,3,40
chr10	93605377	.	TAGACAGACAGAC	T	25513.88	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=12.787;DP=618;FS=1.592;HRun=0;HaplotypeScore=250.0026;InbreedingCoeff=0.9767;MQ=64.38;MQ0=5;MQRankSum=-14.469;QD=68.22;ReadPosRankSum=3.512;VQSLOD=4.6112;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:9:15.05:0,15,389	1/1:2,9:11:24.08:856,24,0	0/0:40,0:31:52.36:0,52,2747	0/0:32,0:29:51.43:0,51,2405	1/1:11,14:25:39.13:1355,39,0	1/1:4,16:20:54.19:1857,54,0	1/1:8,13:21:48.16:1565,48,0	1/1:13,14:27:39.06:894,39,0	1/1:3,6:9:24.07:733,24,0	1/1:8,19:27:66.22:2109,66,0	1/1:13,13:26:42.14:1430,42,0	1/1:9,13:22:45.14:1513,45,0	1/1:5,18:23:54.19:1927,54,0	1/1:4,14:18:48.16:1696,48,0	1/1:7,21:28:69.24:2330,69,0	1/1:6,20:26:63.22:2181,63,0	0/0:5,0:14:21.07:0,21,545	1/1:7,2:9:6.02:214,6,0	0/0:20,0:19:36.12:0,36,1401	0/0:39,0:39:93.31:0,93,5125	0/0:23,0:23:57.20:0,57,3199	1/1:6,10:16:36.12:1153,36,0	1/1:14,11:25:36.12:1153,36,0	1/1:7,10:17:20.72:602,21,0	1/1:4,14:18:45.13:1492,45,0	0/0:30,0:30:75.26:0,75,4283	0/0:37,0:36:99:0,99,5548	1/1:3,3:6:15.05:455,15,0
chr10	93605446	.	CAAA	C	15940.81	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=14.278;DP=607;FS=1.507;HRun=7;HaplotypeScore=164.0239;InbreedingCoeff=0.9927;MQ=70.25;MQ0=0;MQRankSum=-7.543;QD=37.60;ReadPosRankSum=3.810;VQSLOD=2.7896;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:30.10:0,30,670	1/1:2,5:7:12.04:184,12,0	0/0:13,0:12:27.09:0,27,572	0/0:13,0:13:29.67:0,30,625	1/1:1,29:30:66.21:1012,66,0	1/1:2,30:32:87.30:1334,87,0	1/1:1,22:23:51.17:782,51,0	1/1:0,27:27:81.26:1218,81,0	1/1:1,16:17:48.16:735,48,0	1/1:4,22:26:69.20:1030,69,0	1/1:2,17:19:45.14:690,45,0	1/1:2,22:24:51.17:782,51,0	1/1:4,28:32:75.25:1150,75,0	1/1:1,18:19:54.18:821,54,0	1/1:3,37:40:99:1700,111,0	1/1:2,28:30:78.26:1196,78,0	0/0:14,0:14:39.12:0,39,826	1/1:0,7:7:18.06:276,18,0	0/0:22,0:22:63.21:0,63,1355	0/0:23,0:23:60.21:0,60,1341	0/0:22,0:22:66.23:0,66,1475	1/1:3,12:15:30.10:460,30,0	1/1:2,23:25:60.20:917,60,0	1/1:2,13:15:21.07:321,21,0	1/1:3,22:25:60.19:920,60,0	0/0:30,1:31:47.29:0,47,1925	0/0:33,0:33:99:0,99,2169	1/1:2,9:11:27.09:414,27,0
chr10	93605731	.	GA	G	6662.89	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=8.420;DP=575;FS=2.266;HRun=10;HaplotypeScore=61.9881;InbreedingCoeff=0.9360;MQ=64.90;MQ0=3;MQRankSum=0.327;QD=18.01;ReadPosRankSum=1.716;VQSLOD=5.6848;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,1:24:5.80:0,6,432	1/1:1,6:7:15:130,15,0	0/0:38,0:23:3.64:0,4,230	0/0:13,0:6:5.74:0,6,30	1/1:3,23:27:59:499,59,0	1/1:2,23:25:56.99:495,57,0	1/1:0,11:11:29.99:260,30,0	1/1:9,21:30:59.20:498,59,0	1/1:3,10:13:26.99:234,27,0	1/1:2,15:17:38.97:335,39,0	1/1:2,23:25:53.98:467,54,0	1/1:5,14:19:32.99:286,33,0	1/1:5,22:27:47.98:417,48,0	1/1:3,15:18:26.99:234,27,0	1/1:3,18:21:47.99:417,48,0	1/1:5,18:23:47.98:416,48,0	0/0:20,0:20:54.13:0,54,589	1/1:3,13:16:29.99:260,30,0	0/0:19,0:19:33.08:0,33,358	0/0:18,0:20:53.81:0,54,558	0/0:20,0:20:23.63:0,24,467	1/1:1,11:12:32.99:286,33,0	1/1:2,21:23:50.98:439,51,0	1/1:3,13:16:26.99:234,27,0	1/1:2,16:18:38.98:338,39,0	0/0:25,0:25:69.17:0,69,749	0/0:24,1:24:41.27:0,41,683	1/1:4,18:22:47.85:417,48,0
chr10	93606024	.	AGAACC	A	1937.34	PASS	AB=0.959;AC=21;AF=0.389;AN=54;BaseQRankSum=-3.617;DP=475;FS=1.530;HRun=0;HaplotypeScore=87.9775;InbreedingCoeff=-0.6594;MQ=36.46;MQ0=25;MQRankSum=-0.191;QD=4.90;ReadPosRankSum=-3.809;VQSLOD=1.0088;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:29:99:195,0,652	0/0:12,0:10:27.09:0,27,544	./.	0/0:2,0:1:3.01:0,3,43	0/1:16,9:23:17.65:18,0,607	0/0:19,0:17:15.01:0,15,194	0/1:14,0:13:11.03:11,0,479	0/1:25,13:37:99:286,0,1155	0/1:14,0:13:90.69:91,0,250	0/1:30,0:29:99:371,0,882	0/1:21,1:19:48.22:48,0,167	0/1:10,0:8:83.71:120,0,84	0/0:17,0:15:32.86:0,33,459	0/1:11,1:11:41.83:42,0,133	0/1:20,0:19:99:132,0,624	0/1:16,0:13:99:140,0,141	0/1:23,0:17:39.25:39,0,412	0/0:7,0:4:5.03:0,5,66	0/1:18,0:18:12.35:12,0,706	0/1:12,1:13:34.70:35,0,431	0/1:7,1:6:27.96:28,0,244	0/1:7,0:5:98.89:99,0,141	0/1:17,0:17:90.99:91,0,648	0/1:15,0:12:53.74:54,0,76	0/1:22,0:17:99:116,0,669	0/1:14,0:13:53.70:54,0,369	0/1:24,1:24:99:110,0,524	0/0:21,0:17:38.85:0,39,590
chr10	93606486	.	TA	T	9527.47	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=12.605;DP=592;FS=2.380;HRun=8;HaplotypeScore=55.7318;InbreedingCoeff=0.9963;MQ=76.86;MQ0=0;MQRankSum=2.661;QD=24.49;ReadPosRankSum=-0.239;VQSLOD=5.4138;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:51.08:493,51,0	1/1:0,9:9:21.03:203,21,0	0/0:14,0:14:18.05:0,18,211	0/0:10,0:10:24.03:0,24,254	1/1:3,33:36:99:956,99,0	0/0:27,0:27:78.20:0,78,917	0/0:12,0:12:27.07:0,27,315	1/1:3,33:36:99:956,99,0	1/1:4,13:17:30.04:287,30,0	1/1:4,18:22:57.08:547,57,0	1/1:2,27:29:75.11:724,75,0	0/0:32,0:32:93.28:0,93,1113	0/0:17,0:17:48.15:0,48,580	0/0:23,0:23:66.19:0,66,786	1/1:1,26:27:69.11:666,69,0	1/1:3,25:28:66.10:637,66,0	1/1:2,13:15:36.01:338,36,0	1/1:0,7:7:18.03:174,18,0	1/1:2,13:15:38.99:360,39,0	1/1:6,24:30:66.09:637,66,0	1/1:4,12:16:36.05:348,36,0	0/0:25,0:25:66.19:0,66,787	0/0:27,0:27:77.60:0,78,914	0/0:16,0:16:42.13:0,42,507	1/1:1,14:15:39.06:377,39,0	1/1:3,32:35:96.15:927,96,0	1/1:0,22:22:63.10:608,63,0	1/1:0,11:11:29.79:289,30,0
chr10	93607127	.	TA	T	5068.44	PASS	AB=0.833;AC=23;AF=0.411;AN=56;BaseQRankSum=11.872;DP=652;FS=9.634;HRun=12;HaplotypeScore=66.1640;InbreedingCoeff=0.8789;MQ=69.29;MQ0=0;MQRankSum=0.112;QD=16.56;ReadPosRankSum=2.806;VQSLOD=5.7671;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:48.07:0,48,475	1/1:1,11:12:26.89:209,27,0	0/0:13,0:9:6.01:0,6,58	0/0:12,0:8:12.44:0,12,75	1/1:6,31:37:56.12:613,56,0	0/0:21,0:21:22.49:0,22,394	0/0:17,1:18:9.80:0,10,272	1/1:8,26:36:81.68:607,82,0	1/1:5,13:18:29.84:232,30,0	1/1:2,21:23:59.71:461,60,0	1/1:5,40:48:99:890,119,0	0/0:21,2:23:36.89:0,37,555	0/0:20,0:20:48.01:0,48,467	0/0:20,0:20:42.03:0,42,447	1/1:6,23:29:68.73:534,69,0	1/1:3,24:27:62.75:488,63,0	0/1:15,4:20:21.77:22,0,332	1/1:2,9:12:8.43:172,8,0	0/0:16,0:16:39.04:0,39,381	0/0:44,0:45:99:0,105,1043	0/0:12,1:13:6.83:0,7,251	0/0:32,0:32:81.15:0,81,815	0/0:25,0:25:62.92:0,63,599	0/0:16,0:16:45.08:0,45,451	1/1:2,23:26:61.80:470,62,0	0/0:28,1:29:39.72:0,40,550	0/0:24,0:23:53.98:0,54,519	1/1:1,17:18:47.81:371,48,0
chr10	93607784	.	G	GCACA	29985.28	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.877;DP=856;FS=0.000;HRun=0;HaplotypeScore=150.8922;InbreedingCoeff=0.9564;MQ=61.25;MQ0=3;MQRankSum=-3.884;QD=38.54;ReadPosRankSum=6.263;VQSLOD=4.5880;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:39.13:742,39,0	1/1:4,17:22:44.89:1035,45,0	0/0:38,0:26:23.74:0,24,783	0/0:39,0:33:50.16:0,50,765	1/1:12,23:36:59.94:1425,60,0	1/1:2,22:25:59.94:1430,60,0	1/1:16,9:25:21.56:706,22,0	1/1:26,1:45:62.41:879,62,0	1/1:6,16:24:48.16:1190,48,0	1/1:6,22:34:84:1768,84,0	1/1:6,15:21:39.13:970,39,0	1/1:10,27:40:87.03:2064,87,0	1/1:9,15:27:47.95:1073,48,0	1/1:11,19:33:53.92:1280,54,0	1/1:11,26:37:60.21:1491,60,0	1/1:9,35:45:96.12:2316,96,0	1/1:21,0:21:45.15:859,45,0	1/1:7,10:18:13.47:736,13,0	1/1:14,0:26:36.93:508,37,0	1/1:7,1:37:57.19:950,57,0	1/1:13,0:30:9.03:158,9,0	1/1:6,23:31:59.94:1430,60,0	1/1:11,26:37:66.13:1641,66,0	1/1:4,18:25:48.10:1071,48,0	1/1:9,26:38:87.03:2080,87,0	1/1:10,1:29:54.18:960,54,0	1/1:14,2:33:39.13:684,39,0	1/1:0,3:12:27.09:540,27,0
chr10	93607787	.	C	CACAG	19673.08	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=12.097;DP=861;FS=3.171;HRun=0;HaplotypeScore=184.4909;InbreedingCoeff=-0.3316;MQ=58.68;MQ0=3;MQRankSum=-3.646;QD=25.00;ReadPosRankSum=16.450;VQSLOD=1.5587;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:6,20:26:42.14:1087,42,0	1/1:22,0:22:22.42:676,22,0	0/0:36,0:24:24.90:0,25,1010	0/0:38,0:30:84.24:0,84,1271	0/1:37,0:37:31.40:900,0,31	0/1:27,0:27:3.44:910,0,3	0/1:23,0:23:99:434,0,133	0/1:47,0:46:99:319,0,417	1/1:22,0:22:26.21:801,26,0	0/1:34,0:34:9.40:978,0,9	0/1:22,0:22:24.72:627,0,25	0/1:40,0:40:64.15:1318,0,64	0/1:29,0:29:80.45:670,0,80	0/1:33,0:33:54.34:807,0,54	0/1:38,0:37:43.59:940,0,44	1/1:47,0:47:9.75:1481,10,0	1/1:0,22:23:45.15:1211,45,0	0/1:18,0:18:37.89:485,0,38	0/1:26,0:26:99:175,0,246	1/1:35,0:35:13.19:573,13,0	0/1:29,0:29:78.77:82,0,79	0/1:32,0:32:50.31:907,0,50	1/1:37,0:37:2.27:1066,2,0	0/1:27,0:27:13.78:663,0,14	0/1:40,0:40:2.25:1314,0,2	0/1:29,0:29:99:515,0,164	0/1:32,0:32:99:371,0,172	1/1:12,0:12:27.08:363,27,0
chr10	93608115	.	TGA	T	8692.66	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=18.379;DP=654;FS=13.722;HRun=0;HaplotypeScore=98.5280;InbreedingCoeff=0.9894;MQ=69.75;MQ0=2;MQRankSum=-2.810;QD=37.15;ReadPosRankSum=2.344;VQSLOD=6.4634;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.33:0,96,1850	1/1:1,13:14:27.04:387,27,0	0/0:22,0:21:60.21:0,60,1148	0/0:21,0:21:63.22:0,63,1211	1/1:1,29:30:69.23:1056,69,0	0/0:21,0:21:60.19:0,60,1106	0/0:23,0:23:66.23:0,66,1275	1/1:2,25:27:75.24:1127,75,0	1/1:0,21:20:51.17:781,51,0	1/1:2,21:22:10.72:845,11,0	1/1:1,22:23:54.17:826,54,0	0/0:33,0:33:96.32:0,96,1797	0/0:35,0:35:99:0,105,2028	0/0:19,0:19:57.20:0,57,1101	1/1:0,31:31:84.24:1260,84,0	1/1:0,20:20:57.15:847,57,0	0/0:27,0:27:81.28:0,81,1560	1/1:0,7:7:12.04:184,12,0	0/0:15,0:15:45.15:0,45,865	0/0:25,0:25:69.24:0,69,1323	0/0:29,0:29:84.29:0,84,1623	0/0:21,0:21:60.19:0,60,1118	0/0:17,0:17:48.15:0,48,883	0/0:24,0:24:72.25:0,72,1367	1/1:1,28:29:63.21:965,63,0	0/0:21,0:21:63.21:0,63,1185	0/0:35,0:34:99:0,102,1970	1/1:0,9:9:27.09:413,27,0
chr10	93610688	.	GA	G	1315.90	PASS	AB=0.746;AC=40;AF=0.769;AN=52;BaseQRankSum=1.524;DP=302;FS=1.477;HRun=13;HaplotypeScore=53.6504;InbreedingCoeff=-0.1672;MQ=35.30;MQ0=56;MQRankSum=0.621;QD=4.55;ReadPosRankSum=1.693;VQSLOD=0.9940;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,7:14:8.93:66,9,0	0/1:2,2:3:20.18:35,0,20	./.	./.	0/1:8,4:9:7.59:53,0,8	1/1:4,8:11:17.88:131,18,0	1/1:8,2:8:5.86:44,6,0	1/1:10,6:15:14.78:109,15,0	0/0:6,0:5:0:0,0,0	0/1:6,5:11:3.72:92,0,4	0/1:11,2:14:18.23:39,0,18	0/1:7,4:10:36.10:69,0,36	1/1:6,2:8:8.83:65,9,0	0/0:6,0:5:0:0,0,0	1/1:7,1:6:2.83:22,3,0	0/1:11,3:15:15.39:58,0,15	1/1:21,2:19:7.76:47,8,0	1/1:14,3:12:8.85:65,9,0	1/1:7,1:6:4.78:27,5,0	0/1:12,4:15:17.41:54,0,17	1/1:5,3:6:2.56:21,3,0	1/1:9,2:8:5.90:44,6,0	1/1:6,2:5:2.96:22,3,0	1/1:7,1:3:2.90:22,3,0	0/1:5,2:7:12.40:76,0,12	1/1:12,7:13:24.89:165,25,0	1/1:5,1:4:2.93:22,3,0	1/1:12,4:10:14.20:95,14,0
chr10	93610821	.	G	GCA	3608.55	PASS	AB=0.947;AC=33;AF=0.589;AN=56;BaseQRankSum=8.516;DP=456;FS=17.362;HRun=0;HaplotypeScore=115.2885;InbreedingCoeff=-0.0521;MQ=50.85;MQ0=10;MQRankSum=1.460;QD=9.50;ReadPosRankSum=5.988;VQSLOD=1.6109;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,1:28:1.54:178,0,2	0/1:5,0:5:13.52:29,0,14	0/0:17,0:12:36.12:0,36,553	0/0:25,0:12:33.10:0,33,503	0/1:23,0:23:62.33:78,0,62	1/1:18,0:18:35.24:296,35,0	1/1:14,0:13:14.65:153,15,0	0/1:8,10:19:99:370,0,139	0/1:12,0:12:15.94:54,0,16	0/1:15,0:15:99:283,0,164	0/1:13,0:12:12.35:12,0,69	1/1:21,0:20:16.89:215,17,0	1/1:12,0:12:20.02:127,20,0	1/1:16,0:15:16.82:135,17,0	0/1:13,0:13:25.93:26,0,116	0/1:9,0:9:16.48:17,0,16	1/1:13,0:13:32.04:283,32,0	0/1:19,1:20:62.35:62,0,139	0/1:11,0:11:79.29:79,0,223	0/0:13,0:13:12.03:0,12,177	0/1:12,12:25:99:107,0,224	1/1:13,0:13:23.44:204,23,0	1/1:16,1:16:34.12:253,34,0	1/1:16,0:16:28.99:193,29,0	0/1:12,0:12:33.97:34,0,159	0/1:22,0:21:99:417,0,139	0/1:13,0:13:2.79:3,0,240	0/0:21,0:18:16.20:0,16,403
chr10	93610822	.	T	TGTGTGCAC	6238.12	PASS	AB=0.931;AC=38;AF=0.679;AN=56;BaseQRankSum=-7.005;DP=483;FS=0.000;HRun=0;HaplotypeScore=160.3654;InbreedingCoeff=-0.1536;MQ=51.70;MQ0=10;MQRankSum=-2.341;QD=14.61;ReadPosRankSum=-0.666;VQSLOD=3.8669;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:65.05:203,0,65	1/1:1,4:7:3.01:130,3,0	0/0:18,0:13:36.12:0,36,675	0/0:25,0:12:33.11:0,33,638	1/1:8,12:25:3.01:115,3,0	1/1:19,0:19:4.57:281,5,0	1/1:18,0:17:14.13:250,14,0	1/1:21,0:21:1.51:692,2,0	1/1:11,0:12:9.03:207,9,0	1/1:5,0:14:30.10:726,30,0	1/1:4,9:14:1.81:5,2,0	0/1:21,0:20:99:228,0,103	0/1:12,0:12:52.24:52,0,66	0/1:17,0:16:57.07:102,0,57	0/1:7,0:15:51.37:172,0,51	1/1:5,0:11:6.02:172,6,0	1/1:13,0:13:0.09:261,0,0	1/1:10,9:22:15.05:459,15,0	0/1:10,0:10:99:145,0,109	0/0:8,0:13:2.38:0,2,23	0/1:29,0:29:58.70:250,0,59	1/1:13,0:13:8.65:210,9,0	0/1:17,0:16:9.90:96,0,10	0/1:16,0:16:13.41:74,0,13	1/1:6,3:12:9.03:335,9,0	0/1:23,0:24:35.29:802,0,35	0/1:12,0:14:54.62:63,0,55	0/1:13,6:18:83.78:211,0,84
chr10	93610823	.	G	GCACG	6502.34	PASS	AB=0.973;AC=38;AF=0.679;AN=56;BaseQRankSum=3.233;DP=483;FS=1.693;HRun=0;HaplotypeScore=135.1994;InbreedingCoeff=0.0439;MQ=51.66;MQ0=9;MQRankSum=0.919;QD=15.19;ReadPosRankSum=5.682;VQSLOD=4.2053;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:0.29:296,0,0	1/1:6,0:6:7.08:72,7,0	0/0:17,0:13:36.12:0,36,679	0/0:25,0:12:33.11:0,33,638	1/1:25,0:25:13.19:112,13,0	1/1:19,0:19:36.01:448,36,0	1/1:18,0:17:17.59:283,18,0	0/1:20,0:20:57.49:610,0,57	1/1:12,0:12:8.76:136,9,0	0/1:15,0:15:26.55:542,0,27	0/1:15,0:14:2.50:2,0,57	1/1:23,0:22:15.70:368,16,0	1/1:12,0:12:19.50:156,20,0	1/1:17,0:16:19.89:209,20,0	0/1:15,0:15:99:104,0,123	1/1:11,0:11:6.01:88,6,0	1/1:13,0:13:32.84:430,33,0	0/1:22,0:22:99:258,0,118	0/1:10,0:10:99:139,0,244	0/0:13,0:13:11.74:0,12,167	0/1:29,0:29:99:218,0,167	1/1:13,0:13:24.02:317,24,0	1/1:18,0:17:38.86:378,39,0	1/1:16,0:16:35.73:332,36,0	0/1:11,0:11:85.84:165,0,86	0/1:13,11:24:99:758,0,177	0/1:13,0:13:39.74:40,0,228	0/1:23,0:20:40.83:41,0,389
chr10	93610937	.	TGCACATGCACACGCACATGCACAC	T	15703.55	PASS	AB=0.969;AC=33;AF=0.589;AN=56;BaseQRankSum=10.338;DP=457;FS=23.692;HRun=0;HaplotypeScore=234.2338;InbreedingCoeff=-0.2457;MQ=57.54;MQ0=6;MQRankSum=-6.064;QD=39.76;ReadPosRankSum=9.624;VQSLOD=1.8568;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:57.96:146,0,58	0/1:3,0:3:33.05:141,0,33	0/0:21,0:11:16.18:0,16,817	0/0:25,0:14:7.66:0,8,358	0/1:13,0:13:39.09:746,0,39	1/1:2,10:12:9.03:583,9,0	0/1:1,25:26:0:0,0,0	0/0:14,0:14:24.78:0,25,166	0/1:8,0:8:31.29:292,0,31	0/1:14,0:14:97.30:566,0,97	0/1:12,0:12:51.17:585,0,51	1/1:1,27:28:18.06:1078,18,0	1/1:0,14:14:21.54:1352,22,0	1/1:0,24:24:27.09:1715,27,0	0/1:15,0:15:81.76:735,0,82	0/1:19,0:19:50.25:1026,0,50	0/1:14,0:14:47.96:107,0,48	0/1:12,0:12:7.59:8,0,99	0/1:6,0:6:30.07:30,0,61	0/1:21,0:21:41.89:1281,0,42	0/1:18,0:18:19.45:133,0,19	1/1:2,15:17:6.02:389,6,0	1/1:1,16:17:20.80:1332,21,0	1/1:1,20:21:3.01:194,3,0	0/1:11,0:11:46.04:585,0,46	0/1:22,1:23:99:1148,0,142	1/1:22,0:22:25.02:1386,25,0	0/1:2,0:2:17.98:145,0,18
chr10	93610943	.	TGCACACGCACATGCACACGCACAC	T	17199.62	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=4.428;DP=430;FS=5.729;HRun=0;HaplotypeScore=212.2805;InbreedingCoeff=0.5044;MQ=48.56;MQ0=6;MQRankSum=-0.259;QD=45.14;ReadPosRankSum=5.477;VQSLOD=2.7293;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:25:3.01:177,3,0	1/1:3,0:3:5.38:176,5,0	0/0:21,0:12:24.05:0,24,1165	0/0:28,0:13:20.18:0,20,962	1/1:12,0:12:21.07:889,21,0	1/1:10,0:10:9.03:539,9,0	0/1:25,0:25:0:0,0,0	1/1:11,0:11:14.28:75,14,0	1/1:8,0:8:8.71:361,9,0	1/1:13,0:13:21.85:736,22,0	1/1:12,0:12:14.78:693,15,0	1/1:28,0:28:18.06:1005,18,0	1/1:14,0:14:21.54:1259,22,0	1/1:24,0:24:27.09:1577,27,0	1/1:15,0:15:26.92:917,27,0	1/1:17,0:17:29.92:1226,30,0	1/1:13,0:13:14.97:230,15,0	0/1:9,0:9:27.97:32,0,28	1/1:6,0:6:9.02:120,9,0	1/1:3,17:20:24.08:1454,24,0	1/1:11,0:11:8.99:199,9,0	1/1:15,0:15:6.02:359,6,0	1/1:16,0:16:20.80:1223,21,0	1/1:20,0:20:3.01:182,3,0	1/1:10,0:10:15:689,15,0	1/1:9,12:21:30.10:1379,30,0	1/1:1,20:21:25.02:1536,25,0	1/1:2,0:2:3.01:168,3,0
chr10	93610951	.	CACATGCACACGCACACGCACACGCACACG	C	12904.18	PASS	AB=0.838;AC=38;AF=0.679;AN=56;BaseQRankSum=8.854;DP=394;FS=15.020;HRun=0;HaplotypeScore=223.9220;InbreedingCoeff=0.2754;MQ=42.49;MQ0=8;MQRankSum=-5.198;QD=40.20;ReadPosRankSum=9.108;VQSLOD=1.3327;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:3.01:78,3,0	0/1:2,1:3:5.32:235,0,5	0/0:20,0:10:30.02:0,30,1815	0/0:28,0:11:33.10:0,33,1674	0/1:6,6:12:9.19:1171,0,9	1/1:10,0:10:9.03:241,9,0	1/1:25,0:25:0.47:1,0,0	0/1:7,0:7:0.35:213,0,0	1/1:4,2:6:8.58:473,9,0	1/1:7,4:11:13.14:1092,13,0	1/1:6,4:10:2.27:888,2,0	1/1:28,0:28:17.65:415,18,0	1/1:14,0:14:21.54:572,22,0	1/1:24,0:24:27.09:688,27,0	0/1:7,6:13:8.29:1256,0,8	1/1:8,7:15:30.10:1648,30,0	0/0:11,0:11:15.68:0,16,84	0/1:6,0:6:50.70:51,0,103	0/0:4,0:3:7.18:0,7,44	0/1:19,0:19:42.57:631,0,43	0/0:10,0:10:11.10:0,11,95	1/1:15,0:15:6.02:161,6,0	1/1:16,0:16:20.80:530,21,0	1/1:20,0:20:3.01:82,3,0	1/1:4,4:8:15.05:888,15,0	0/1:14,1:15:99:645,0,104	1/1:21,0:21:24.55:741,25,0	0/1:1,1:2:11.02:204,0,11
chr10	93610953	.	CAT	C	2545.75	PASS	AB=1.000;AC=46;AF=0.852;AN=54;BaseQRankSum=7.500;DP=389;FS=8.908;HRun=0;HaplotypeScore=147.9653;InbreedingCoeff=0.2934;MQ=41.80;MQ0=9;MQRankSum=-4.053;QD=8.11;ReadPosRankSum=7.293;VQSLOD=2.1192;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:3:27,3,0	1/1:2,0:2:5.89:63,6,0	0/0:20,0:10:22.76:0,23,491	0/0:30,0:11:32.30:0,32,498	1/1:6,3:9:13.87:153,14,0	1/1:10,0:10:8.52:42,9,0	./.	1/1:0,6:6:18.02:260,18,0	1/1:2,3:5:8.76:79,9,0	1/1:5,5:10:29.41:318,29,0	1/1:4,3:7:14.61:141,15,0	1/1:28,0:28:14.68:71,15,0	1/1:14,0:14:19.80:96,20,0	1/1:24,0:24:25.67:128,26,0	1/1:6,4:10:26.55:298,27,0	1/1:7,6:13:29.29:279,29,0	0/1:13,0:13:12.69:13,0,38	1/1:0,4:4:11.93:140,12,0	0/1:5,0:4:6.88:7,0,18	1/1:18,0:18:1.09:108,1,0	0/1:20,0:20:31.05:31,0,76	1/1:16,0:15:5.68:28,6,0	1/1:16,0:16:19.87:102,20,0	1/1:20,0:20:2.84:14,3,0	1/1:4,3:7:14.51:109,15,0	0/1:14,0:14:7.74:62,0,8	1/1:21,0:21:22.15:108,22,0	1/1:1,0:1:2.88:15,3,0
chr10	93610954	.	ATG	A	2313.48	PASS	AB=0.918;AC=47;AF=0.839;AN=56;BaseQRankSum=6.828;DP=386;FS=4.341;HRun=0;HaplotypeScore=147.5306;InbreedingCoeff=0.2995;MQ=41.79;MQ0=9;MQRankSum=-3.422;QD=6.89;ReadPosRankSum=6.209;VQSLOD=2.5999;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:2.68:11,3,0	1/1:2,0:2:5.84:41,6,0	0/0:20,0:10:17.93:0,18,503	0/0:30,0:11:17.45:0,17,437	1/1:9,0:9:13.72:114,14,0	1/1:10,0:10:8.52:42,9,0	0/1:25,0:25:0:0,0,0	1/1:6,0:6:15.03:170,15,0	1/1:5,0:5:8.68:56,9,0	1/1:10,0:10:28.73:225,29,0	1/1:7,0:7:14.50:106,14,0	1/1:28,0:28:17.13:88,17,0	1/1:14,0:14:20.05:114,20,0	1/1:24,0:24:25.73:148,26,0	1/1:10,0:10:26.41:229,26,0	1/1:13,0:13:29.08:219,29,0	0/1:12,1:13:68.48:103,0,68	1/1:4,0:4:11.80:89,12,0	0/1:4,1:4:8.69:51,0,9	1/1:17,0:17:23.13:175,23,0	0/1:15,4:19:69.98:70,0,120	1/1:16,0:15:5.68:28,6,0	1/1:16,0:16:17.51:86,18,0	1/1:20,0:20:2.84:14,3,0	1/1:7,0:7:14.37:90,14,0	0/1:14,0:14:57.78:63,0,58	1/1:20,0:20:22.34:115,22,0	1/1:1,0:1:2.84:14,3,0
chr10	93611478	.	CA	C	5112.98	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.536;DP=491;FS=6.027;HRun=1;HaplotypeScore=44.7571;InbreedingCoeff=0.9986;MQ=83.19;MQ0=0;MQRankSum=0.366;QD=37.87;ReadPosRankSum=2.523;VQSLOD=5.1089;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:36.12:503,36,0	0/0:11,0:11:33.09:0,33,502	0/0:15,0:15:45.12:0,45,677	0/0:13,0:13:39.13:0,39,577	0/0:22,0:22:66.23:0,66,1055	0/0:16,0:16:48.15:0,48,744	0/0:12,0:12:36.11:0,36,552	0/0:31,0:31:93.30:0,93,1445	0/0:19,0:19:57.16:0,57,864	0/0:17,0:17:51.17:0,51,796	0/0:20,0:20:60.20:0,60,953	0/0:19,0:19:57.19:0,57,909	0/0:17,0:17:51.16:0,51,792	0/0:16,0:16:48.15:0,48,744	0/0:24,0:24:72.25:0,72,1151	0/0:25,0:25:75.26:0,75,1197	1/1:0,14:14:36.12:503,36,0	0/0:10,0:10:30.10:0,30,479	1/1:0,17:17:51.17:714,51,0	1/1:0,26:26:72.24:1007,72,0	1/1:0,10:10:24.08:336,24,0	0/0:14,0:14:42.13:0,42,650	0/0:16,0:16:48.16:0,48,755	0/0:7,0:7:21.07:0,21,336	0/0:18,0:18:54.17:0,54,841	1/1:1,25:26:30.27:1001,30,0	1/1:0,28:28:75.25:1049,75,0	0/0:14,0:14:42.14:0,42,671
chr10	93612218	.	T	TG	24628	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.637;DP=604;FS=0.000;HRun=0;HaplotypeScore=84.5587;InbreedingCoeff=0.9761;MQ=86.09;MQ0=0;MQRankSum=-9.908;QD=43.67;ReadPosRankSum=5.677;VQSLOD=4.6317;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:54.18:863,54,0	1/1:0,5:5:12.04:192,12,0	0/0:24,0:24:68.95:0,69,952	0/0:16,0:16:36.06:0,36,454	1/1:0,30:30:87.30:1391,87,0	1/1:1,31:32:90.31:1436,90,0	1/1:1,19:20:54.18:864,54,0	1/1:0,29:30:90.28:1383,90,0	1/1:0,14:14:39.13:624,39,0	1/1:2,26:28:78.27:1247,78,0	1/1:0,16:16:48.16:767,48,0	1/1:1,20:21:57.09:878,57,0	1/1:1,20:21:60.20:949,60,0	1/1:1,24:25:66.23:1054,66,0	1/1:1,29:30:75.26:1199,75,0	1/1:1,23:24:66.23:1055,66,0	1/1:1,18:19:50.66:777,51,0	1/1:0,16:16:48.16:767,48,0	1/1:0,14:14:42.14:671,42,0	1/1:0,28:28:72.25:1150,72,0	1/1:1,11:12:30.10:480,30,0	1/1:0,19:19:57.19:911,57,0	1/1:0,20:20:54.18:863,54,0	1/1:0,17:17:48.16:767,48,0	1/1:0,27:27:72.25:1151,72,0	1/1:0,34:34:99:1607,102,0	1/1:2,31:32:84.29:1343,84,0	1/1:0,7:7:15.05:240,15,0
chr10	93612654	.	A	AG	1202.68	PASS	AB=0.984;AC=12;AF=0.214;AN=56;BaseQRankSum=-4.519;DP=449;FS=0.000;HRun=2;HaplotypeScore=82.9461;InbreedingCoeff=0.7496;MQ=65.09;MQ0=2;MQRankSum=1.172;QD=9.47;ReadPosRankSum=1.485;VQSLOD=1.3125;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:35.72:0,36,295	0/0:10,0:10:18.03:0,18,91	0/0:37,0:15:11.99:0,12,147	0/1:30,0:16:6.08:6,0,45	0/0:25,0:24:51.99:0,52,287	0/0:13,0:13:15.40:0,15,215	0/0:10,0:10:3:0,3,133	0/0:22,0:23:52.53:0,53,332	0/0:12,0:12:23.89:0,24,138	0/0:21,0:21:43.25:0,43,325	0/0:18,0:18:30.55:0,31,205	0/0:16,0:16:21.55:0,22,253	0/0:13,0:13:16.56:0,17,120	0/0:13,0:12:25.98:0,26,210	0/0:21,0:20:38.15:0,38,254	0/0:11,0:10:25.07:0,25,162	0/0:15,0:14:35.62:0,36,291	0/0:4,0:4:8.65:0,9,33	1/1:16,1:17:24.18:285,24,0	1/1:23,2:25:70.57:469,71,0	1/1:8,0:8:14.67:98,15,0	0/0:7,0:7:16.70:0,17,121	0/0:13,0:13:38.56:0,39,304	0/1:8,0:8:10.47:10,0,35	0/0:15,0:15:30.24:0,30,163	1/1:9,3:12:22.25:207,22,0	1/1:26,0:25:17.89:302,18,0	0/0:9,0:9:23.47:0,23,146
chr10	93612680	.	TA	T	3691.94	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=4.408;DP=458;FS=9.960;HRun=10;HaplotypeScore=72.8826;InbreedingCoeff=0.8940;MQ=70.10;MQ0=2;MQRankSum=0.067;QD=17.66;ReadPosRankSum=1.220;VQSLOD=3.8968;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,12:16:29.96:260,30,0	1/1:3,4:7:11.98:104,12,0	0/0:34,0:18:21.19:0,21,198	0/0:26,0:13:4.72:0,5,19	1/1:8,25:33:68.79:577,69,0	0/0:13,0:13:1.30:0,1,240	0/0:6,0:6:6:0,6,57	1/1:7,16:23:20.78:408,21,0	1/1:0,7:7:18:156,18,0	1/1:3,19:22:56.48:478,56,0	1/1:7,14:21:41.94:358,42,0	0/0:15,0:15:15.04:0,15,163	0/0:16,0:16:33.07:0,33,356	0/0:13,0:13:27.07:0,27,299	1/1:5,16:21:44.96:387,45,0	1/1:3,14:17:29.99:260,30,0	1/1:3,9:11:23.98:208,24,0	1/1:1,2:3:3:26,3,0	0/0:10,0:10:21.03:0,21,221	0/0:22,0:23:49.82:0,50,574	0/0:7,0:7:18:0,18,177	0/0:14,1:15:13.05:0,13,364	0/0:13,0:13:27.07:0,27,299	0/0:7,0:7:12.02:0,12,125	1/1:6,12:18:32.97:286,33,0	0/0:13,0:13:30.07:0,30,325	0/0:37,0:36:99:0,99,1023	1/1:2,7:9:20.99:182,21,0
chr10	93613121	.	AAT	A	1044.16	PASS	AB=0.785;AC=13;AF=0.271;AN=48;BaseQRankSum=4.883;DP=304;FS=5.019;HRun=0;HaplotypeScore=65.7808;InbreedingCoeff=0.6374;MQ=61.39;MQ0=1;MQRankSum=-3.829;QD=10.55;ReadPosRankSum=0.089;VQSLOD=2.8371;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:7:14.52:0,15,156	./.	0/0:7,0:1:2.99:0,3,23	0/0:14,0:14:22.35:0,22,238	1/1:13,12:25:36.11:422,36,0	0/1:4,6:10:2.66:65,0,3	0/0:49,0:50:85.91:0,86,1073	0/0:9,0:9:17:0,17,120	0/0:10,0:10:13.94:0,14,139	0/0:11,0:10:18.35:0,18,221	1/1:3,7:11:20.85:220,21,0	1/1:3,10:13:17.78:167,18,0	1/1:5,3:8:14.98:158,15,0	0/0:8,0:8:8.76:0,9,105	0/0:11,0:11:11.40:0,11,85	0/0:14,0:14:29.89:0,30,436	0/0:7,0:7:5.80:0,6,44	./.	0/0:5,0:5:5.99:0,6,50	0/0:4,0:4:3:0,3,25	./.	1/1:6,8:15:9.03:107,9,0	0/1:3,1:4:0:0,0,0	0/1:12,1:13:66.53:67,0,122	0/0:12,0:12:11.95:0,12,99	0/0:7,0:6:8.78:0,9,60	0/0:12,0:12:25.18:0,25,227
chr10	93613139	.	CAT	C	3819.21	PASS	AB=1.000;AC=42;AF=0.875;AN=48;BaseQRankSum=4.389;DP=254;FS=1.066;HRun=0;HaplotypeScore=56.9147;InbreedingCoeff=0.3543;MQ=56.63;MQ0=1;MQRankSum=-0.481;QD=16.46;ReadPosRankSum=-0.432;VQSLOD=3.1236;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:1:2.96:19,3,0	1/1:5,2:7:8.98:81,9,0	./.	0/1:7,0:2:0:0,0,0	1/1:4,8:12:15.05:186,15,0	1/1:4,17:21:39.10:438,39,0	1/1:6,0:6:4.55:27,5,0	1/1:47,1:48:89.22:1014,89,0	1/1:1,6:7:15.05:186,15,0	1/1:1,8:9:21.54:255,22,0	1/1:4,7:10:10.27:146,10,0	1/1:3,10:13:18.05:202,18,0	1/1:5,6:11:21.06:237,21,0	1/1:2,9:11:12.01:125,12,0	1/1:2,3:5:3.01:37,3,0	1/1:1,9:10:8.89:111,9,0	0/0:12,0:12:36.12:0,36,613	1/1:1,7:8:12.04:144,12,0	./.	./.	0/0:2,0:2:0:0,0,0	./.	1/1:6,3:9:9:83,9,0	1/1:3,1:4:2.99:23,3,0	1/1:2,8:10:21.06:254,21,0	1/1:5,0:5:0.26:35,0,0	0/1:5,0:4:14.99:30,0,15	1/1:3,9:12:15.05:186,15,0
chr10	93613148	.	GTA	G	4025.46	PASS	AC=42;AF=0.875;AN=48;BaseQRankSum=3.987;DP=249;FS=2.332;HRun=0;HaplotypeScore=57.7497;InbreedingCoeff=0.5677;MQ=58.71;MQ0=0;MQRankSum=0.921;QD=18.21;ReadPosRankSum=0.795;VQSLOD=3.6164;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:3.01:38,3,0	1/1:5,0:5:5.99:59,6,0	./.	0/0:7,0:5:8.96:0,9,82	1/1:10,0:10:13.28:183,13,0	1/1:20,0:20:39.10:436,39,0	1/1:6,0:6:2.99:24,3,0	1/1:17,29:46:90.49:1020,90,0	1/1:6,0:6:15.05:182,15,0	1/1:9,0:9:21.06:243,21,0	1/1:11,0:10:15.03:172,15,0	1/1:13,0:13:18.05:205,18,0	1/1:12,0:12:21.06:236,21,0	1/1:12,0:12:10.27:105,10,0	1/1:4,0:4:3.01:37,3,0	1/1:10,0:10:9.03:112,9,0	0/0:13,0:13:36.09:0,36,585	1/1:8,0:8:12.51:146,13,0	./.	./.	0/0:1,1:2:0:0,0,0	./.	1/1:8,0:8:11.99:106,12,0	1/1:5,0:5:2.98:22,3,0	1/1:11,0:11:21.06:254,21,0	1/1:1,5:6:15.90:157,16,0	1/1:3,2:4:9.02:104,9,0	1/1:13,0:13:15.05:185,15,0
chr10	93613652	.	GAA	G	3188.85	PASS	AB=0.695;AC=20;AF=0.357;AN=56;BaseQRankSum=4.061;DP=488;FS=0.812;HRun=14;HaplotypeScore=75.8235;InbreedingCoeff=0.7897;MQ=68.14;MQ0=0;MQRankSum=0.545;QD=15.33;ReadPosRankSum=6.077;VQSLOD=2.7720;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:13.84:0,14,137	1/1:2,8:11:17.67:151,18,0	0/0:12,1:4:6.02:0,6,74	0/0:12,0:7:0:0,0,0	1/1:6,24:32:80.46:708,80,0	0/0:20,0:23:58.62:0,59,676	0/1:10,2:14:22.97:23,0,267	0/0:18,0:21:43.59:0,44,499	1/1:2,14:16:17.17:336,17,0	1/1:6,25:33:13.03:589,13,0	1/1:3,14:17:42.02:389,42,0	0/0:16,0:17:47.61:0,48,591	0/0:24,0:27:65.12:0,65,751	0/0:9,0:11:30.07:0,30,373	1/1:2,18:21:44.76:401,45,0	1/1:2,9:12:14.82:186,15,0	0/1:4,1:17:6.80:7,0,55	1/1:3,5:9:5.82:102,6,0	0/0:19,0:19:45.13:0,45,592	0/0:22,1:24:34.86:0,35,678	0/0:13,0:13:30.10:0,30,417	0/0:9,0:9:21.01:0,21,226	0/0:10,0:18:34.04:0,34,327	0/0:7,0:7:18.04:0,18,234	1/1:5,21:26:35.86:503,36,0	0/0:20,1:24:58.20:0,58,731	0/0:23,1:25:43.33:0,43,782	0/0:11,0:11:27.08:0,27,361
chr10	93615551	.	AG	A	2767.56	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-3.644;DP=446;FS=3.119;HRun=13;HaplotypeScore=66.7006;InbreedingCoeff=0.4282;MQ=72.83;MQ0=3;MQRankSum=-3.425;QD=6.61;ReadPosRankSum=1.559;VQSLOD=2.5504;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,2:23:21.94:129,22,0	1/1:1,0:5:4.54:12,5,0	0/1:27,0:16:24.51:25,0,47	0/0:17,0:13:5.21:0,5,57	1/1:8,1:14:13.53:50,14,0	1/1:16,5:21:8.85:59,9,0	1/1:10,1:12:12.58:67,13,0	1/1:15,0:15:2.90:20,3,0	1/1:12,0:15:13.37:50,13,0	1/1:7,1:12:11.27:43,11,0	1/1:2,0:6:4.07:12,4,0	1/1:7,6:15:10.93:60,11,0	1/1:10,4:14:11.90:86,12,0	1/1:14,4:18:5.94:44,6,0	1/1:7,0:22:28.53:88,29,0	1/1:9,0:23:28.84:86,29,0	1/1:16,2:21:32.78:165,33,0	1/1:14,0:19:20.80:71,21,0	1/1:7,10:17:21.34:201,21,0	1/1:5,12:17:35.72:262,36,0	1/1:3,16:19:38.69:284,39,0	0/0:6,0:6:2.88:0,3,15	1/1:5,0:6:7.98:48,8,0	1/1:13,5:18:20.53:152,21,0	1/1:6,0:12:12:35,12,0	1/1:0,22:23:67.66:486,68,0	1/1:4,20:24:47.66:350,48,0	0/0:4,0:4:0:0,0,0
chr10	93615563	.	GGT	G	416.20	PASS	AB=0.914;AC=12;AF=0.214;AN=56;BaseQRankSum=1.158;DP=398;FS=15.739;HRun=0;HaplotypeScore=73.6701;InbreedingCoeff=-0.0928;MQ=76.09;MQ0=2;MQRankSum=-2.411;QD=2.69;ReadPosRankSum=6.970;VQSLOD=-0.0693;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,1:17:26.45:0,26,207	0/1:5,0:5:2.14:2,0,17	0/0:18,0:11:17.74:0,18,249	0/0:18,0:17:31.84:0,32,327	0/1:13,1:14:25.27:25,0,115	0/1:17,0:17:9.57:10,0,190	0/0:9,1:10:3.27:0,3,142	0/0:16,0:16:40.53:0,41,357	0/1:8,6:14:56.48:179,0,56	0/1:8,0:8:13.40:13,0,41	0/0:6,0:6:6.03:0,6,56	0/1:10,0:10:5.69:7,0,6	0/0:10,0:10:10.55:0,11,121	0/0:12,1:13:20.14:0,20,135	0/1:17,2:19:11.39:71,0,11	0/1:18,3:21:72.05:78,0,72	0/1:19,3:22:13.80:14,0,226	1/1:10,4:14:1.40:114,1,0	0/0:19,0:19:55.58:0,56,409	0/0:13,0:13:36.66:0,37,196	0/0:20,0:20:48.71:0,49,274	0/0:6,0:6:14.98:0,15,133	0/0:6,0:6:7.15:0,7,83	0/0:12,0:12:22.81:0,23,173	0/1:9,2:11:43.78:44,0,71	0/0:25,0:25:58.96:0,59,329	0/0:24,0:24:54.75:0,55,300	0/0:10,0:10:30:0,30,298
chr10	93615750	.	C	CT	749.03	PASS	AB=0.868;AC=13;AF=0.232;AN=56;BaseQRankSum=-2.119;DP=527;FS=3.946;HRun=13;HaplotypeScore=90.2038;InbreedingCoeff=0.2632;MQ=85.30;MQ0=7;MQRankSum=0.431;QD=4.28;ReadPosRankSum=-1.826;VQSLOD=1.5164;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:38:74.30:0,74,487	0/1:6,0:6:0:0,0,0	0/0:61,0:29:5.87:0,6,132	0/1:46,0:29:46.65:47,0,53	0/0:20,1:23:18.59:0,19,265	0/0:19,0:20:44.56:0,45,308	0/0:13,0:15:28.70:0,29,186	0/0:28,1:30:43.50:0,43,293	0/0:11,0:11:20.75:0,21,141	0/0:10,0:11:16.83:0,17,108	0/0:8,0:8:11.85:0,12,82	0/0:18,0:18:28.67:0,29,191	0/0:15,0:16:28.58:0,29,183	0/1:9,1:11:7.97:8,0,88	0/0:10,0:11:23.60:0,24,155	0/0:11,0:11:23.74:0,24,164	0/0:33,0:34:67.39:0,67,458	0/1:9,2:12:8.02:8,0,86	1/1:6,8:14:26.89:222,27,0	0/1:6,3:9:29.06:42,0,29	0/1:10,16:26:26.52:238,0,27	0/1:10,1:14:12.66:13,0,57	0/0:11,0:16:26.88:0,27,161	0/0:14,0:14:29.44:0,29,203	0/0:4,0:7:15.98:0,16,94	1/1:13,10:25:5.22:175,5,0	1/1:4,6:11:0.44:147,0,0	0/0:6,0:6:14.87:0,15,103
chr10	93618052	.	AT	A	15612.89	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.305;DP=667;FS=2.944;HRun=8;HaplotypeScore=66.3548;InbreedingCoeff=0.9665;MQ=83.28;MQ0=0;MQRankSum=-7.772;QD=24.78;ReadPosRankSum=5.582;VQSLOD=5.3066;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:54.09:521,54,0	1/1:1,9:10:27.04:261,27,0	0/0:15,0:15:8.76:0,9,128	0/0:22,0:22:50.78:0,51,562	1/1:0,31:31:93.11:889,93,0	1/1:3,28:31:72.05:684,72,0	1/1:2,17:19:39.06:377,39,0	1/1:6,32:38:95.99:876,96,0	1/1:3,21:24:60.09:579,60,0	1/1:3,22:25:66.10:637,66,0	1/1:3,26:29:78.12:752,78,0	1/1:0,24:24:60.10:579,60,0	1/1:1,23:24:63.10:608,63,0	1/1:3,16:19:45.07:435,45,0	1/1:3,21:24:63.10:608,63,0	1/1:3,32:35:87.14:840,87,0	1/1:1,13:14:33.05:319,33,0	1/1:1,11:12:30.05:290,30,0	1/1:1,18:19:54.06:514,54,0	1/1:3,21:24:60.09:578,60,0	1/1:3,25:28:72.11:695,72,0	1/1:1,26:27:72.11:695,72,0	1/1:2,20:22:54.08:521,54,0	1/1:0,19:19:54.09:521,54,0	1/1:1,20:21:57.09:550,57,0	1/1:2,30:32:90.12:862,90,0	1/1:1,33:34:96.15:926,96,0	1/1:0,21:21:51.08:492,51,0
chr10	93618610	.	A	AATCTTTC	17559.09	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-4.475;DP=260;FS=6.423;HRun=0;HaplotypeScore=93.1821;InbreedingCoeff=0.3553;MQ=60.86;MQ0=5;MQRankSum=-4.464;QD=71.38;ReadPosRankSum=2.380;VQSLOD=5.0674;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,3:19:51.18:1670,51,0	1/1:4,0:4:9.03:299,9,0	0/0:14,0:11:4.64:0,5,346	0/1:10,0:6:7.86:8,0,100	1/1:14,3:15:33.11:957,33,0	1/1:14,1:14:33.11:1049,33,0	1/1:3,2:5:15.05:516,15,0	1/1:22,2:23:66.07:1923,66,0	1/1:5,0:5:15.05:484,15,0	1/1:11,2:12:33.07:1149,33,0	1/1:10,1:10:18.06:629,18,0	1/1:4,0:4:12.04:380,12,0	1/1:9,0:9:24.08:732,24,0	1/1:2,0:2:6.02:191,6,0	1/1:8,1:9:15.05:484,15,0	1/1:10,0:10:27.09:856,27,0	1/1:6,0:6:12.03:340,12,0	1/1:6,2:8:21.07:641,21,0	1/1:8,1:7:21.07:742,21,0	1/1:9,1:8:24.08:771,24,0	1/1:3,0:3:9.03:262,9,0	1/1:3,0:2:3.01:58,3,0	1/1:4,0:4:9.03:292,9,0	1/1:2,0:2:3.01:89,3,0	1/1:12,0:12:27.09:901,27,0	1/1:9,0:9:21.07:725,21,0	1/1:8,0:8:18.06:590,18,0	1/1:11,1:11:24.08:822,24,0
chr10	93618611	.	A	ATCTTTC	13019.36	PASS	AB=1.000;AC=51;AF=0.944;AN=54;BaseQRankSum=-4.326;DP=188;FS=9.866;HRun=0;HaplotypeScore=80.2215;InbreedingCoeff=0.4204;MQ=69.38;MQ0=3;MQRankSum=-4.693;QD=75.26;ReadPosRankSum=3.512;VQSLOD=5.0404;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:18:51.18:1614,51,0	1/1:1,2:3:6.02:191,6,0	0/0:14,0:11:23.21:0,23,385	0/1:10,0:6:5.22:5,0,89	1/1:3,9:10:27.09:760,27,0	1/1:1,11:11:30.10:939,30,0	1/1:2,3:5:15.05:459,15,0	1/1:2,9:8:24.08:815,24,0	1/1:0,4:4:12.04:378,12,0	1/1:2,4:5:15.05:472,15,0	1/1:1,3:3:6.02:183,6,0	1/1:0,4:4:12.04:379,12,0	1/1:0,7:8:24.08:727,24,0	1/1:0,2:2:6.02:191,6,0	1/1:1,4:5:12.04:377,12,0	1/1:0,10:10:27.09:853,27,0	1/1:0,5:5:12.04:339,12,0	1/1:2,5:7:21.07:582,21,0	1/1:1,5:5:15.05:489,15,0	1/1:2,8:8:24.08:747,24,0	1/1:0,1:1:3.01:93,3,0	./.	1/1:1,2:3:6.02:186,6,0	1/1:0,1:1:3.01:89,3,0	1/1:0,5:5:15.05:475,15,0	1/1:0,6:6:12.04:389,12,0	1/1:0,7:7:18.06:588,18,0	1/1:1,7:7:21.07:700,21,0
chr10	93618614	.	ATAT	A	5023.19	PASS	AB=0.545;AC=49;AF=0.907;AN=54;BaseQRankSum=1.112;DP=187;FS=16.222;HRun=0;HaplotypeScore=102.9016;InbreedingCoeff=0.4459;MQ=69.69;MQ0=1;MQRankSum=-3.829;QD=30.63;ReadPosRankSum=4.611;VQSLOD=3.9993;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,15:19:52.14:550,52,0	1/1:0,2:2:6.02:78,6,0	0/0:13,0:11:32.58:0,33,342	0/0:9,0:6:1.47:0,1,54	1/1:3,9:10:27:271,27,0	1/1:2,11:12:30.09:377,30,0	1/1:2,3:5:14.71:148,15,0	1/1:2,9:8:24.08:359,24,0	1/1:0,4:4:12.04:150,12,0	1/1:2,4:5:14.78:177,15,0	1/1:1,3:3:6.02:69,6,0	1/1:0,4:4:12.04:152,12,0	1/1:0,7:8:24.06:279,24,0	1/1:0,2:2:6.02:77,6,0	1/1:1,4:5:12.04:150,12,0	1/1:0,10:10:27.09:342,27,0	0/1:1,5:6:7.23:101,0,7	1/1:2,5:7:20.49:205,20,0	1/1:1,5:5:15.05:210,15,0	1/1:1,8:8:23.74:265,24,0	1/1:0,1:1:3.01:36,3,0	./.	1/1:0,2:3:8.99:93,9,0	1/1:0,1:1:3.01:32,3,0	1/1:0,5:5:15.05:191,15,0	1/1:0,6:6:12.04:161,12,0	1/1:0,7:7:18.06:247,18,0	1/1:1,7:7:21.07:303,21,0
chr10	93620291	.	CAA	C	1593.20	PASS	AB=0.595;AC=11;AF=0.196;AN=56;BaseQRankSum=1.323;DP=530;FS=0.000;HRun=13;HaplotypeScore=84.1798;InbreedingCoeff=0.3764;MQ=78.10;MQ0=4;MQRankSum=-0.830;QD=11.38;ReadPosRankSum=3.808;VQSLOD=2.4416;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,1:27:20.85:21,0,151	0/1:3,1:4:17.06:17,0,118	0/0:50,1:26:19.50:0,20,365	0/0:38,0:20:18.43:0,18,175	0/0:17,0:17:36.05:0,36,455	0/0:22,1:26:33.03:0,33,720	0/0:20,0:20:51.03:0,51,643	0/0:22,1:29:39.53:0,40,799	0/0:14,0:14:33.11:0,33,461	0/0:19,0:20:39.11:0,39,530	0/0:15,0:15:33.07:0,33,448	0/0:19,2:22:1.43:0,1,643	0/0:16,0:18:44.50:0,44,503	0/0:8,0:11:23.55:0,24,285	0/0:15,0:20:46.10:0,46,551	0/0:12,0:12:20.56:0,21,269	0/1:2,1:20:13.33:13,0,117	0/0:15,1:16:1.01:0,1,360	1/1:5,16:24:49.39:491,49,0	1/1:2,9:13:26.43:227,26,0	0/1:2,8:12:15.94:149,0,16	0/0:14,1:16:0.97:0,1,337	0/0:15,0:15:39.08:0,39,520	0/0:3,0:3:9.03:0,9,130	0/0:10,0:13:28.56:0,29,321	0/1:2,11:14:4.68:284,0,5	1/1:5,21:26:57.01:553,57,0	0/0:12,0:12:36.10:0,36,500
chr10	93621999	.	AAAAG	A	1674	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-0.636;DP=249;FS=0.000;HRun=0;HaplotypeScore=56.3548;InbreedingCoeff=0.8097;MQ=77.21;MQ0=4;MQRankSum=-1.620;QD=37.20;ReadPosRankSum=0.336;VQSLOD=3.4409;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.63:0,67,1527	0/0:2,0:2:6.01:0,6,102	0/0:18,0:15:20.88:0,21,444	0/0:9,0:6:4.46:0,4,70	0/0:14,0:12:33.06:0,33,713	0/0:9,0:9:24.08:0,24,306	0/0:4,0:4:12.04:0,12,153	0/0:19,0:17:45.10:0,45,936	0/0:5,0:4:12.04:0,12,250	0/0:9,0:9:27.09:0,27,606	0/0:13,0:13:39.12:0,39,908	0/0:6,0:6:15.04:0,15,189	0/0:5,0:5:12.04:0,12,155	0/0:7,0:7:21.07:0,21,269	0/0:8,0:8:24.08:0,24,608	0/0:3,0:3:9.03:0,9,192	0/0:10,0:10:30:0,30,568	0/0:15,0:14:36.12:0,36,893	1/1:2,8:9:21.04:331,21,0	1/1:0,4:4:12.04:203,12,0	1/1:1,4:5:6.01:102,6,0	0/0:2,0:2:3.01:0,3,39	0/0:3,0:3:6.02:0,6,77	0/0:4,0:4:12.04:0,12,156	0/0:7,0:7:21.07:0,21,529	1/1:1,6:7:21.07:337,21,0	1/1:1,18:19:51.16:865,51,0	0/0:7,0:6:18.06:0,18,453
chr10	93622025	.	G	GA	5054.88	PASS	AB=0.791;AC=38;AF=0.679;AN=56;BaseQRankSum=-8.316;DP=301;FS=16.820;HRun=9;HaplotypeScore=39.9918;InbreedingCoeff=0.7677;MQ=72.49;MQ0=0;MQRankSum=0.160;QD=25.92;ReadPosRankSum=-0.567;VQSLOD=3.2981;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:62.96:0,63,545	1/1:1,1:2:3.01:33,3,0	0/0:13,0:11:14.05:0,14,111	0/0:9,0:6:5.98:0,6,48	1/1:3,9:12:30.06:316,30,0	0/1:5,4:9:5.04:164,0,5	1/1:1,8:9:21.06:232,21,0	1/1:4,21:25:63.13:669,63,0	1/1:0,6:6:18.05:199,18,0	1/1:2,9:11:30.08:330,30,0	1/1:0,13:13:39.10:429,39,0	1/1:2,9:11:27.07:299,27,0	1/1:1,6:7:18.05:199,18,0	1/1:1,8:9:22:262,22,0	1/1:0,9:9:27.07:299,27,0	1/1:1,11:12:33.09:365,33,0	0/0:13,0:13:32.97:0,33,283	1/1:4,11:15:24.06:266,24,0	0/0:16,0:16:35.98:0,36,312	0/0:3,0:3:9:0,9,78	0/0:6,0:6:8.99:0,9,78	1/1:0,4:4:12.03:133,12,0	1/1:1,2:3:6.02:66,6,0	1/1:2,6:8:18.01:186,18,0	1/1:0,13:13:33.09:365,33,0	0/1:7,1:8:12.16:12,0,135	0/0:17,0:17:44.99:0,45,391	1/1:2,7:9:21.06:232,21,0
chr10	93622291	.	GAA	G	4511.91	PASS	AB=0.734;AC=30;AF=0.536;AN=56;BaseQRankSum=-4.063;DP=585;FS=8.641;HRun=14;HaplotypeScore=79.0152;InbreedingCoeff=0.7414;MQ=60.27;MQ0=13;MQRankSum=0.654;QD=12.40;ReadPosRankSum=5.804;VQSLOD=3.3316;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,31:40:68.95:637,69,0	1/1:0,5:5:12.01:111,12,0	0/0:23,0:12:28.83:0,29,249	0/1:12,0:7:4.34:4,0,169	1/1:8,28:35:36.42:475,36,0	0/0:11,0:11:22.61:0,23,280	0/0:18,0:18:39.08:0,39,502	1/1:8,14:21:35.79:366,36,0	1/1:2,15:17:32.76:290,33,0	1/1:6,16:22:16.15:345,16,0	1/1:6,5:11:27.78:230,28,0	0/0:18,0:19:36.12:0,36,489	0/0:20,0:22:48.04:0,48,587	0/0:18,0:20:32.52:0,33,386	1/1:3,21:23:45:416,45,0	1/1:7,10:17:20.82:241,21,0	1/1:9,21:30:56.54:511,57,0	1/1:14,13:28:15.26:377,15,0	0/1:12,1:19:15.46:15,0,120	0/1:5,0:13:2.20:2,0,94	0/0:2,0:20:22.46:0,22,78	0/0:9,0:9:23.29:0,23,245	0/0:19,1:20:7.54:0,8,354	0/0:28,0:30:64.65:0,65,788	1/1:4,14:19:21.87:348,22,0	0/1:13,1:29:5.01:5,0,231	0/0:8,1:23:6.09:0,6,143	1/1:3,8:11:15.01:138,15,0
chr10	93622724	.	CGT	C	605.89	PASS	AB=0.966;AC=18;AF=0.360;AN=50;BaseQRankSum=0.035;DP=529;FS=10.803;HRun=0;HaplotypeScore=76.3263;InbreedingCoeff=0.2480;MQ=61.42;MQ0=9;MQRankSum=2.343;QD=2.44;ReadPosRankSum=-1.327;VQSLOD=0.7013;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:23.70:0,24,263	./.	./.	./.	0/0:16,0:16:2.52:0,3,23	0/1:12,0:12:22.79:23,0,78	0/0:18,0:18:8.96:0,9,106	0/0:32,0:32:8.86:0,9,58	0/0:17,0:16:2.99:0,3,24	0/0:12,0:12:12.35:0,12,88	0/0:10,0:12:0.12:0,0,0	0/0:16,0:15:12.04:0,12,157	0/0:14,3:17:6:0,6,60	0/1:14,0:14:31.23:31,0,118	0/0:14,0:14:6.02:0,6,84	0/0:20,0:18:6:0,6,52	0/1:29,0:29:13.19:13,0,140	0/0:16,0:15:11.97:0,12,108	1/1:21,0:20:14.99:142,15,0	1/1:15,0:15:6.01:64,6,0	1/1:40,1:41:17.82:152,18,0	0/1:14,0:14:23.09:23,0,75	0/1:15,2:17:24.98:25,0,40	0/1:25,1:27:18.14:18,0,428	1/1:25,0:24:0.47:1,0,0	1/1:11,8:19:20.88:201,21,0	1/1:9,1:11:8.84:70,9,0	0/0:8,0:8:3.01:0,3,42
chr10	93623431	.	GA	G	5484.01	PASS	AB=0.817;AC=48;AF=0.857;AN=56;BaseQRankSum=-0.712;DP=652;FS=1.512;HRun=13;HaplotypeScore=103.2701;InbreedingCoeff=0.4233;MQ=62.21;MQ0=3;MQRankSum=0.209;QD=9.41;ReadPosRankSum=5.735;VQSLOD=4.2211;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:30:41.49:458,41,0	1/1:8,0:8:10.17:28,10,0	0/0:35,0:14:6.02:0,6,68	0/0:31,1:15:27.63:0,28,211	0/1:21,0:21:32.85:42,0,33	0/1:12,11:23:20.73:217,0,21	1/1:7,14:21:40.74:290,41,0	1/1:32,0:31:24.62:78,25,0	1/1:24,0:24:22.19:62,22,0	1/1:30,0:30:31.58:112,32,0	1/1:28,0:28:40.94:170,41,0	1/1:4,22:28:75.66:537,76,0	1/1:11,14:25:27.41:328,27,0	1/1:7,12:20:10.95:251,11,0	1/1:28,0:28:29.40:82,29,0	1/1:22,0:22:4.54:80,5,0	1/1:5,11:16:24.69:193,25,0	1/1:17,0:16:19.88:55,20,0	0/1:7,16:22:7.72:275,0,8	1/1:8,18:26:24.94:321,25,0	1/1:3,12:15:9.60:233,10,0	1/1:3,20:23:30.45:386,30,0	1/1:3,15:18:12.58:255,13,0	1/1:6,14:20:9.67:233,10,0	1/1:20,0:20:32.32:103,32,0	1/1:16,18:35:51.64:359,52,0	1/1:8,15:24:46.73:334,47,0	0/1:5,0:5:0.58:1,0,18
chr10	93623439	.	AAAAAAG	A	3213.87	PASS	AB=0.979;AC=18;AF=0.321;AN=56;BaseQRankSum=9.153;DP=662;FS=4.811;HRun=0;HaplotypeScore=171.6664;InbreedingCoeff=0.7228;MQ=63.08;MQ0=3;MQRankSum=-2.276;QD=13.06;ReadPosRankSum=-1.105;VQSLOD=2.8335;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.25:0,78,1635	1/1:8,0:8:16.29:124,16,0	0/0:41,0:14:23.91:0,24,347	0/0:35,0:15:24.23:0,24,534	0/1:22,0:22:66.38:220,0,66	0/0:26,0:26:56.86:0,57,1232	0/0:20,0:19:54.16:0,54,1078	1/1:36,1:36:11.94:426,12,0	0/1:20,1:21:0.72:285,0,1	1/1:30,1:31:55.29:538,55,0	1/1:31,0:31:51.17:474,51,0	0/0:31,0:31:93.31:0,93,1882	0/0:24,0:24:45.68:0,46,1354	0/0:20,0:20:50.61:0,51,961	1/1:26,2:28:47.15:421,47,0	0/1:24,1:25:7.77:251,0,8	0/0:19,0:19:39.19:0,39,773	1/1:13,1:14:31.13:267,31,0	0/0:21,0:21:59.76:0,60,1205	0/0:28,0:28:70.47:0,70,1424	0/0:13,0:12:39.13:0,39,877	0/0:24,0:24:71.44:0,71,1496	0/0:20,0:20:51.17:0,51,1133	0/0:18,0:18:42.14:0,42,940	1/1:23,1:24:35.68:398,36,0	0/0:29,0:29:43.49:0,43,1091	0/0:19,0:19:53.67:0,54,1067	0/1:5,0:5:11.98:12,0,61
chr10	93623440	.	AAAAAG	A	7422.63	PASS	AB=0.778;AC=21;AF=0.375;AN=56;BaseQRankSum=-6.963;DP=655;FS=4.610;HRun=0;HaplotypeScore=143.5862;InbreedingCoeff=0.7730;MQ=62.41;MQ0=3;MQRankSum=-0.900;QD=27.39;ReadPosRankSum=-3.724;VQSLOD=3.8634;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.22:0,78,1250	1/1:3,5:8:21.04:327,21,0	0/0:40,0:13:17.88:0,18,243	0/0:35,0:15:26.66:0,27,466	0/1:3,19:22:13.50:487,0,13	0/0:25,0:25:37.32:0,37,944	0/0:21,0:20:54.15:0,54,844	1/1:8,28:35:76.10:900,76,0	1/1:3,18:21:17.77:584,18,0	1/1:4,27:31:83.97:1057,84,0	1/1:3,28:31:83.62:1024,84,0	0/0:31,0:31:93.30:0,93,1469	0/0:24,0:24:58.69:0,59,1056	0/0:20,0:20:26.18:0,26,685	1/1:3,25:28:48.02:801,48,0	1/1:21,5:26:44.13:704,44,0	0/0:17,0:17:37.82:0,38,590	1/1:2,11:13:33.06:531,33,0	0/0:20,0:20:35.04:0,35,872	0/0:28,0:28:73.45:0,73,1129	0/0:13,0:12:39.13:0,39,688	0/0:24,0:24:50.60:0,51,1146	0/0:20,0:20:51.17:0,51,891	0/0:17,0:17:42.14:0,42,725	1/1:12,12:24:67.20:902,67,0	0/1:25,1:26:57.12:57,0,723	0/0:20,0:20:35.32:0,35,805	0/1:4,1:5:16.67:48,0,17
chr10	93623441	.	AAAAG	A	5440.82	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=5.224;DP=658;FS=4.159;HRun=0;HaplotypeScore=140.3537;InbreedingCoeff=0.9658;MQ=62.70;MQ0=3;MQRankSum=-1.527;QD=22.48;ReadPosRankSum=-3.039;VQSLOD=4.1794;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.12:0,87,1060	1/1:8,0:8:21.04:218,21,0	0/0:40,0:13:20.86:0,21,257	0/0:35,0:15:9.43:0,9,328	1/1:22,0:22:35.84:335,36,0	0/0:26,0:26:54.12:0,54,769	0/0:21,0:20:54.10:0,54,651	1/1:35,0:34:75.98:686,76,0	1/1:20,0:20:37.31:383,37,0	1/1:30,0:30:78.02:756,78,0	1/1:29,2:31:71.48:636,71,0	0/0:31,0:31:92.24:0,92,1102	0/0:24,0:24:60.19:0,60,822	0/0:20,0:20:42.14:0,42,554	1/1:27,1:28:47.98:494,48,0	1/1:19,7:26:70.03:870,70,0	0/0:17,0:17:35.81:0,36,459	1/1:12,1:13:32.99:358,33,0	0/0:20,0:20:54.62:0,55,747	0/0:29,0:29:75.18:0,75,944	0/0:13,0:12:39.13:0,39,527	0/0:24,0:24:69.21:0,69,913	0/0:20,0:20:51.14:0,51,687	0/0:17,0:17:42.14:0,42,573	1/1:23,2:25:64.27:671,64,0	0/0:28,0:28:27.39:0,27,641	0/0:20,0:20:54.05:0,54,630	1/1:4,0:4:3.01:33,3,0
chr10	93623529	.	T	TG	4999.38	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-12.906;DP=629;FS=6.411;HRun=6;HaplotypeScore=60.9786;InbreedingCoeff=0.9986;MQ=79.49;MQ0=0;MQRankSum=-0.200;QD=29.76;ReadPosRankSum=1.207;VQSLOD=5.5756;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.13:0,60,611	0/0:10,0:10:27.03:0,27,263	0/0:23,0:22:24.28:0,24,433	0/0:16,0:15:36.95:0,37,360	0/0:37,0:37:99:0,102,1024	1/1:4,38:42:93.30:1170,93,0	1/1:2,13:15:30.10:377,30,0	0/0:28,0:28:72.07:0,72,716	0/0:13,0:14:30.07:0,30,306	0/0:19,0:19:54.06:0,54,535	0/0:32,0:32:84.06:0,84,831	1/1:2,17:19:48.15:604,48,0	1/1:1,19:20:54.17:676,54,0	1/1:1,14:16:33.11:414,33,0	0/0:24,0:24:60.13:0,60,611	0/0:26,0:26:75.17:0,75,764	0/0:21,0:21:57.09:0,57,570	0/0:27,0:27:72.13:0,72,725	0/0:15,0:15:42.09:0,42,428	0/0:34,0:34:96.19:0,96,967	0/0:15,0:15:45.10:0,45,459	1/1:7,14:21:54.13:640,54,0	1/1:2,24:26:69.22:867,69,0	1/1:4,5:9:21.06:252,21,0	0/0:24,0:24:63.12:0,63,636	0/0:30,0:30:78.16:0,78,789	0/0:30,0:30:90.20:0,90,918	0/0:13,0:13:36.08:0,36,367
chr10	93625028	.	GT	G	2741.23	PASS	AC=34;AF=0.630;AN=54;BaseQRankSum=1.739;DP=318;FS=0.646;HRun=12;HaplotypeScore=43.1541;InbreedingCoeff=0.7989;MQ=75.31;MQ0=8;MQRankSum=0.004;QD=11.62;ReadPosRankSum=1.776;VQSLOD=2.7826;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:22:34.80:333,35,0	1/1:1,3:4:8.96:70,9,0	0/0:26,0:15:21.43:0,21,177	0/0:11,0:8:0.91:0,1,31	1/1:3,14:16:38.83:302,39,0	0/0:11,0:11:24.05:0,24,244	0/0:1,0:1:3.01:0,3,30	1/1:13,14:25:16.39:300,16,0	./.	1/1:4,9:12:1.82:187,2,0	1/1:1,5:6:16.98:122,17,0	0/0:9,0:9:18.04:0,18,183	0/0:9,0:9:27.04:0,27,269	0/0:8,0:8:15.03:0,15,152	1/1:1,5:6:14.94:116,15,0	1/1:2,5:7:14.93:116,15,0	1/1:8,27:35:68.70:534,69,0	1/1:0,7:7:14.94:116,15,0	1/1:9,0:20:24.76:73,25,0	1/1:1,0:5:8.14:24,8,0	1/1:0,0:4:8.15:24,8,0	0/0:2,0:2:6.01:0,6,61	0/0:2,0:2:6:0,6,56	0/0:2,0:2:3.01:0,3,30	1/1:1,14:15:37.90:285,38,0	1/1:1,0:16:28.30:84,28,0	1/1:2,0:18:30.55:88,31,0	1/1:2,8:10:20.92:163,21,0
chr10	93626060	.	T	TGGTAGGTA	3946.46	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=0.166;DP=408;FS=0.000;HRun=0;HaplotypeScore=117.9383;InbreedingCoeff=0.8305;MQ=69.02;MQ0=8;MQRankSum=-9.078;QD=64.70;ReadPosRankSum=-1.088;VQSLOD=3.4543;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:29.73:0,30,690	0/0:4,0:4:12.02:0,12,274	0/0:33,0:20:45.13:0,45,1165	0/0:26,0:20:56.86:0,57,1492	0/0:20,0:20:57.20:0,57,1548	0/0:12,0:12:0.92:0,1,145	0/0:11,0:11:14.51:0,15,417	0/0:16,0:16:42.13:0,42,978	0/0:22,0:22:63.19:0,63,1583	0/0:17,0:17:45.15:0,45,1118	0/0:16,0:16:48.13:0,48,1274	0/0:14,0:14:15.01:0,15,357	0/0:7,0:7:14.06:0,14,275	0/0:12,0:12:15.69:0,16,498	0/0:19,0:19:48.15:0,48,1256	0/0:24,0:24:66.23:0,66,1751	0/0:13,0:13:15.91:0,16,598	0/0:3,0:2:6.02:0,6,168	1/1:4,2:6:18.06:649,18,0	1/1:12,5:18:14.99:344,15,0	1/1:6,2:8:3.01:92,3,0	0/0:14,0:14:32.74:0,33,861	0/0:15,0:15:9.57:0,10,615	0/0:9,0:9:8.62:0,9,229	0/0:12,0:12:36.12:0,36,935	1/1:15,5:20:53.21:1954,53,0	1/1:6,2:8:24.08:908,24,0	0/0:10,0:10:30.09:0,30,753
chr10	93626064	.	A	AGGTAGG	2393.70	PASS	AB=0.900;AC=7;AF=0.125;AN=56;BaseQRankSum=4.061;DP=506;FS=17.373;HRun=0;HaplotypeScore=169.9035;InbreedingCoeff=0.3841;MQ=60.61;MQ0=9;MQRankSum=-7.259;QD=29.55;ReadPosRankSum=1.480;VQSLOD=2.5537;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:38.92:0,39,688	0/0:4,0:4:12.04:0,12,300	0/0:30,0:17:49.40:0,49,1123	0/0:26,0:19:56.86:0,57,1360	0/0:21,0:21:60.21:0,60,1500	0/0:19,0:19:9.28:0,9,169	0/0:17,0:16:20.64:0,21,420	0/0:16,0:16:42.60:0,43,914	0/0:25,0:25:65.98:0,66,1561	0/0:16,0:16:48.16:0,48,1172	0/0:18,0:18:33.86:0,34,1145	0/0:24,0:24:25.63:0,26,364	0/0:16,0:16:12.56:0,13,264	0/0:12,0:12:22.47:0,22,473	0/0:23,0:23:47.93:0,48,1200	0/0:25,0:25:69.24:0,69,1666	0/0:14,0:14:26.92:0,27,567	0/0:5,0:4:9.03:0,9,202	0/1:9,0:9:30.79:283,0,31	1/1:15,5:20:12.31:321,12,0	1/1:7,2:8:3.01:92,3,0	0/0:25,0:25:34.54:0,35,795	0/0:23,0:23:18.48:0,18,577	0/0:12,0:12:15.56:0,16,259	0/0:16,0:16:39.12:0,39,945	0/1:16,8:23:24.69:1341,0,25	0/1:18,1:18:41.43:487,0,41	0/0:11,0:11:30.09:0,30,702
chr10	93626152	.	GTA	G	4025.04	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.653;DP=595;FS=4.470;HRun=0;HaplotypeScore=78.0782;InbreedingCoeff=0.9836;MQ=60.86;MQ0=3;MQRankSum=-3.233;QD=36.26;ReadPosRankSum=3.508;VQSLOD=6.0629;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:72.25:0,72,1294	0/0:6,0:6:18.06:0,18,318	0/0:22,0:18:51.17:0,51,901	0/0:20,0:16:42.14:0,42,717	0/0:34,0:34:99:0,99,1752	0/0:17,0:17:39.13:0,39,714	0/0:22,0:22:60.17:0,60,1020	0/0:39,0:39:99:0,114,2052	0/0:23,0:23:66.21:0,66,1178	0/0:29,0:29:84.27:0,84,1509	0/0:21,0:21:57.20:0,57,1034	0/0:33,0:33:96.32:0,96,1722	0/0:13,0:13:30.10:0,30,549	0/0:17,0:17:51.17:0,51,932	0/0:30,0:30:84.29:0,84,1529	0/0:29,0:29:81.28:0,81,1485	0/0:13,0:13:33.11:0,33,604	0/0:3,0:3:9.03:0,9,165	1/1:2,13:13:39.08:534,39,0	1/1:3,20:23:60.20:858,60,0	1/1:1,28:29:66.22:945,66,0	0/0:20,0:20:60.18:0,60,1040	0/0:17,0:17:48.16:0,48,873	0/0:16,0:16:42.14:0,42,758	0/0:25,0:25:72.22:0,72,1252	1/1:1,21:22:39.28:871,39,0	1/1:2,20:22:57.19:816,57,0	0/0:7,0:7:21.07:0,21,377
chr10	93626417	.	GAA	G	8113.67	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-14.198;DP=639;FS=0.378;HRun=13;HaplotypeScore=94.6400;InbreedingCoeff=0.8988;MQ=71.71;MQ0=7;MQRankSum=-2.051;QD=20.65;ReadPosRankSum=0.884;VQSLOD=4.4021;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:30:69.08:669,69,0	1/1:1,2:3:3:29,3,0	0/0:43,0:25:45.76:0,46,411	0/0:39,0:18:4.62:0,5,226	1/1:7,24:31:59.96:582,60,0	0/0:7,0:27:53.43:0,53,252	0/0:7,0:21:7.16:0,7,68	1/1:7,22:29:66.01:629,66,0	1/1:4,10:14:23.71:282,24,0	1/1:7,23:30:66.02:639,66,0	1/1:8,18:26:59.98:566,60,0	0/0:6,0:16:7.92:0,8,43	0/0:6,0:28:45.76:0,46,158	0/0:6,0:20:35.33:0,35,156	1/1:4,18:23:50.78:477,51,0	1/1:5,24:29:53.86:573,54,0	1/1:2,23:25:63.09:611,63,0	1/1:1,6:7:12.02:116,12,0	1/1:5,16:22:50.79:477,51,0	1/1:7,16:23:35.96:349,36,0	1/1:3,4:8:2.78:79,3,0	0/0:4,0:19:32.32:0,32,113	0/0:2,0:18:37.80:0,38,145	0/0:4,0:15:27.96:0,28,130	1/1:2,19:22:41.85:457,42,0	1/1:2,23:25:66.07:639,66,0	1/1:3,28:32:74.38:710,74,0	1/1:1,12:13:24.04:230,24,0
chr10	93628050	.	T	TA	6472.95	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-14.604;DP=602;FS=6.422;HRun=1;HaplotypeScore=54.9566;InbreedingCoeff=0.9991;MQ=81.93;MQ0=0;MQRankSum=-3.278;QD=40.71;ReadPosRankSum=2.326;VQSLOD=5.3568;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.24:0,75,974	0/0:8,0:8:21.07:0,21,272	0/0:19,0:19:54.16:0,54,680	0/0:15,0:15:36.99:0,37,447	0/0:30,0:30:90.29:0,90,1161	1/1:1,24:25:57.19:854,57,0	1/1:0,12:12:36.12:540,36,0	0/0:41,0:41:99:0,114,1480	0/0:22,0:22:66.20:0,66,840	0/0:29,0:29:87.28:0,87,1121	0/0:25,0:25:69.22:0,69,891	1/1:0,30:30:87.29:1304,87,0	1/1:0,22:22:60.20:898,60,0	1/1:1,12:13:33.11:495,33,0	0/0:25,0:25:75.23:0,75,961	0/0:16,0:15:45.15:0,45,584	0/0:18,0:18:54.17:0,54,688	0/0:11,0:11:30.01:0,30,351	0/0:21,0:21:59.22:0,59,747	0/0:26,0:26:75.24:0,75,973	0/0:11,0:11:33.09:0,33,413	1/1:0,26:26:75.25:1124,75,0	1/1:1,19:20:51.17:763,51,0	1/1:0,11:11:33.11:495,33,0	0/0:24,0:24:69.22:0,69,895	0/0:29,0:29:84.27:0,84,1091	0/0:30,0:29:90.29:0,90,1168	0/0:16,0:16:45.15:0,45,584
chr10	93629415	.	AT	A	946.24	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.823;DP=675;FS=1.194;HRun=10;HaplotypeScore=68.1087;InbreedingCoeff=0.9528;MQ=78.10;MQ0=0;MQRankSum=-0.445;QD=19.71;ReadPosRankSum=-0.170;VQSLOD=4.4195;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:27:68.96:599,69,0	0/0:11,0:11:21.06:0,21,232	0/0:19,1:21:8.66:0,9,310	0/0:16,1:17:14.73:0,15,230	0/0:44,0:46:99:0,117,1263	0/0:32,0:33:90.06:0,90,962	0/0:15,1:16:16.53:0,17,407	0/0:35,1:36:64.18:0,64,929	0/0:23,0:23:48.13:0,48,531	0/0:34,0:34:93.24:0,93,1014	0/0:23,0:23:63.17:0,63,697	0/0:24,0:24:69.17:0,69,753	0/0:17,0:17:45.11:0,45,491	0/0:16,0:17:48.13:0,48,531	0/0:24,1:25:43.13:0,43,704	0/0:31,0:31:84.22:0,84,921	1/1:2,19:21:53.99:469,54,0	0/0:16,0:16:33.04:0,33,344	0/0:29,0:29:75.19:0,75,823	0/0:29,0:30:87.05:0,87,935	0/0:20,0:20:57.14:0,57,622	0/0:18,0:18:39.09:0,39,420	0/0:20,0:20:57.15:0,57,630	0/0:22,0:22:54.15:0,54,597	0/0:25,0:25:69.19:0,69,763	0/0:21,0:21:57.15:0,57,631	0/0:35,0:35:87.18:0,87,928	0/0:17,0:17:42.11:0,42,465
chr10	93632214	.	GCT	G	19775.53	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=6.847;DP=588;FS=4.361;HRun=0;HaplotypeScore=77.5633;InbreedingCoeff=0.9713;MQ=94.36;MQ0=2;MQRankSum=-7.302;QD=40.94;ReadPosRankSum=5.637;VQSLOD=6.6591;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,2001	1/1:0,14:14:33.11:505,33,0	0/0:28,0:28:74.61:0,75,1329	0/0:24,0:24:69.19:0,69,1205	1/1:0,19:18:45.15:689,45,0	1/1:1,18:19:48.16:735,48,0	1/1:1,20:21:57.19:872,57,0	1/1:3,34:37:99:1510,102,0	1/1:0,19:19:45.15:688,45,0	1/1:0,22:22:66.20:986,66,0	1/1:0,13:13:36.12:550,36,0	1/1:1,18:19:51.17:778,51,0	1/1:0,17:17:48.16:733,48,0	1/1:0,17:17:45.15:689,45,0	1/1:0,22:22:51.17:780,51,0	1/1:1,18:19:51.17:781,51,0	0/0:17,0:17:51.15:0,51,932	1/1:0,15:15:45.15:688,45,0	1/1:0,19:19:57.17:831,57,0	1/1:0,22:21:63.21:964,63,0	1/1:1,31:32:77.84:1193,78,0	1/1:0,18:18:54.18:827,54,0	1/1:0,14:14:42.14:643,42,0	1/1:1,22:23:57.19:872,57,0	1/1:0,28:28:75.25:1148,75,0	1/1:0,21:21:63.20:939,63,0	1/1:0,30:30:84.29:1285,84,0	1/1:0,2:2:6.02:92,6,0
chr10	93632381	.	C	CT	4062.53	PASS	AB=0.545;AC=21;AF=0.389;AN=54;BaseQRankSum=-4.328;DP=356;FS=8.594;HRun=7;HaplotypeScore=50.8362;InbreedingCoeff=0.8437;MQ=58.11;MQ0=12;MQRankSum=-4.059;QD=26.04;ReadPosRankSum=-0.585;VQSLOD=3.7013;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:68.90:0,69,657	1/1:1,3:4:9.03:109,9,0	0/0:16,0:4:6:0,6,57	0/0:7,0:4:2.92:0,3,17	1/1:4,14:18:38.99:416,39,0	0/0:10,0:10:27.04:0,27,259	0/0:14,0:13:36.04:0,36,341	1/1:7,27:34:87.25:1038,87,0	1/1:1,5:6:12.04:145,12,0	1/1:5,5:10:15.93:184,16,0	1/1:2,11:13:33.10:396,33,0	0/0:8,0:8:21.03:0,21,203	0/0:5,0:5:9.01:0,9,86	0/0:9,0:9:27.04:0,27,261	1/1:2,19:21:45.14:544,45,0	1/1:0,12:12:24.07:290,24,0	0/0:31,0:31:74.92:0,75,738	0/1:2,10:12:1.70:263,0,2	0/0:17,0:17:41.98:0,42,377	0/0:10,0:10:18.01:0,18,168	0/0:6,0:6:12.01:0,12,116	./.	0/0:3,0:3:9.01:0,9,83	0/0:5,0:5:12.02:0,12,116	1/1:2,13:15:36.10:424,36,0	0/0:14,1:15:2.82:0,3,311	0/0:15,0:15:42.06:0,42,405	1/1:2,9:11:21.06:254,21,0
chr10	93632666	.	TA	T	1410.77	PASS	AB=0.556;AC=9;AF=0.180;AN=50;BaseQRankSum=-1.583;DP=217;FS=8.281;HRun=1;HaplotypeScore=41.0324;InbreedingCoeff=0.7295;MQ=50.54;MQ0=2;MQRankSum=3.819;QD=32.81;ReadPosRankSum=1.186;VQSLOD=2.4422;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:36.11:0,36,542	0/0:4,0:4:12.04:0,12,191	./.	./.	0/0:7,0:7:9.02:0,9,121	0/0:18,0:18:51.17:0,51,805	0/0:6,0:6:18.06:0,18,288	0/0:19,0:19:54.18:0,54,852	0/0:7,0:7:12.03:0,12,167	0/0:14,0:14:42.13:0,42,649	0/0:13,0:13:20.91:0,21,332	0/0:7,0:7:21.07:0,21,334	0/0:4,0:4:12.04:0,12,175	0/0:1,0:1:3.01:0,3,48	0/0:5,0:5:9.03:0,9,144	0/0:5,0:5:12.04:0,12,191	0/0:17,0:17:45.15:0,45,719	0/0:9,0:9:18.06:0,18,287	1/1:0,11:11:30.10:418,30,0	1/1:0,10:10:30.10:418,30,0	1/1:0,4:4:12.04:168,12,0	./.	0/0:3,0:3:9.03:0,9,125	0/0:6,0:6:18.06:0,18,288	0/0:9,0:9:15.05:0,15,239	0/1:2,8:9:23.89:269,0,24	1/1:0,8:8:21.07:294,21,0	0/0:5,0:5:9.03:0,9,144
chr10	93632689	.	T	TAA	676.68	PASS	AB=0.911;AC=7;AF=0.125;AN=56;BaseQRankSum=-2.449;DP=244;FS=5.563;HRun=13;HaplotypeScore=52.8403;InbreedingCoeff=0.3078;MQ=55.59;MQ0=3;MQRankSum=-0.187;QD=11.28;ReadPosRankSum=-1.747;VQSLOD=1.4094;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,14:21:33.11:447,33,0	0/0:4,0:4:10.98:0,11,46	0/1:5,0:4:5.25:11,0,5	0/1:6,0:3:4.08:4,0,29	0/0:11,0:11:10.66:0,11,46	0/0:16,0:16:32.35:0,32,311	0/0:4,0:4:8.92:0,9,71	0/0:14,0:14:10.49:0,10,46	0/0:8,0:8:8.15:0,8,34	0/0:12,0:12:24.32:0,24,99	0/0:15,0:15:26.83:0,27,112	0/0:5,0:5:2.86:0,3,26	0/1:7,0:7:11.55:12,0,89	0/0:1,0:1:3:0,3,26	0/0:10,0:10:19.12:0,19,81	0/0:6,0:6:13.51:0,14,56	1/1:5,12:19:3.22:326,3,0	0/0:9,0:9:13.71:0,14,58	0/0:12,0:12:20.77:0,21,179	0/0:5,0:6:3.75:0,4,28	0/0:3,0:3:5.97:0,6,47	0/0:1,0:1:3:0,3,26	0/0:4,0:4:11.99:0,12,104	0/0:5,0:5:11.94:0,12,106	0/0:11,0:11:10.87:0,11,46	0/0:11,0:10:17.94:0,18,158	0/0:12,0:12:14.58:0,15,117	0/0:3,0:3:5.49:0,5,23
chr10	93632699	.	AAAAG	A	2967.48	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=2.659;DP=257;FS=7.296;HRun=0;HaplotypeScore=50.1753;InbreedingCoeff=0.8982;MQ=66.78;MQ0=3;MQRankSum=-2.036;QD=29.38;ReadPosRankSum=2.623;VQSLOD=2.4069;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:45:0,45,799	1/1:0,4:4:12.04:196,12,0	0/0:7,0:5:10.57:0,11,175	0/0:11,0:7:17.65:0,18,193	1/1:0,9:9:23.90:274,24,0	0/0:16,0:16:45.15:0,45,1080	0/0:3,0:3:9.03:0,9,202	1/1:3,11:14:30.01:350,30,0	1/1:1,8:9:8.96:147,9,0	1/1:0,14:14:42.06:580,42,0	1/1:1,16:17:38.99:546,39,0	0/0:4,0:4:11.99:0,12,227	0/0:8,0:8:24.01:0,24,429	0/0:1,0:1:3.01:0,3,74	1/1:2,8:10:21.04:342,21,0	1/1:1,6:7:14.88:210,15,0	0/0:21,0:21:48.06:0,48,799	1/1:1,7:8:15.05:244,15,0	0/0:14,0:13:36.11:0,36,761	0/0:6,0:6:17.98:0,18,263	0/0:4,0:4:12.02:0,12,219	0/0:3,0:3:9.02:0,9,159	0/0:5,0:5:15.04:0,15,307	0/0:5,0:5:15.05:0,15,366	1/1:1,6:7:12.01:196,12,0	0/0:10,0:9:21.06:0,21,469	0/0:12,0:12:30:0,30,503	1/1:0,2:2:6.02:98,6,0
chr10	93633883	.	A	AAAACAAACAAAC	10996.72	PASS	AB=1.000;AC=33;AF=0.611;AN=54;BaseQRankSum=-11.463;DP=540;FS=0.494;HRun=0;HaplotypeScore=173.1518;InbreedingCoeff=0.8268;MQ=62.89;MQ0=2;MQRankSum=-6.494;QD=32.44;ReadPosRankSum=-4.634;VQSLOD=3.2784;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:28:14.65:0,15,41	1/1:2,3:5:6.02:349,6,0	0/0:17,0:16:15.01:0,15,283	./.	1/1:5,14:27:45.15:2151,45,0	0/0:7,0:22:33.11:0,33,922	0/0:4,0:16:27.09:0,27,703	1/1:30,0:34:30.05:471,30,0	1/1:7,6:15:9.03:524,9,0	1/1:7,8:20:26.93:808,27,0	1/1:7,15:28:30.01:1376,30,0	0/0:12,0:25:39.13:0,39,963	0/0:3,0:13:27.09:0,27,661	0/0:3,0:10:21.07:0,21,553	1/1:9,9:20:9.03:524,9,0	1/1:4,13:24:8.83:524,9,0	0/0:9,0:21:11.97:0,12,31	1/1:6,0:7:5.98:59,6,0	1/1:16,0:27:34.42:482,34,0	1/1:8,0:28:30.68:732,31,0	1/1:5,0:8:9.03:194,9,0	0/0:6,0:11:14.98:0,15,352	0/0:3,0:15:27.09:0,27,747	0/1:6,0:18:49.58:50,0,773	1/1:6,11:21:9.03:524,9,0	1/1:3,0:29:69.60:1450,70,0	1/1:6,0:21:20.87:552,21,0	1/1:1,0:6:9.03:229,9,0
chr10	93635328	.	A	AAATGT	10109.80	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.358;DP=727;FS=2.313;HRun=0;HaplotypeScore=165.4709;InbreedingCoeff=0.9997;MQ=69.63;MQ0=0;MQRankSum=-15.201;QD=62.02;ReadPosRankSum=0.421;VQSLOD=5.7192;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,2235	0/0:10,0:10:30.10:0,30,695	0/0:27,0:26:75.17:0,75,1533	0/0:22,0:22:53.36:0,53,1170	0/0:29,0:29:81.24:0,81,1714	1/1:7,21:28:83.83:1930,84,0	1/1:11,11:22:57.15:1209,57,0	0/0:25,0:25:75.25:0,75,1633	0/0:27,0:27:77.45:0,77,1776	0/0:37,0:37:99:0,108,2280	0/0:22,0:22:66.21:0,66,1423	1/1:6,17:23:69.21:1600,69,0	1/1:7,18:25:75.24:1769,75,0	1/1:7,16:23:69.14:1564,69,0	0/0:40,0:40:99:0,117,2504	0/0:44,0:44:99:0,129,2787	0/0:29,0:29:87.23:0,87,1907	0/0:16,0:16:48.12:0,48,1036	0/0:24,0:23:72.25:0,72,1588	0/0:29,0:29:84.26:0,84,1890	0/0:30,0:30:90.31:0,90,2014	1/1:9,6:15:45.02:775,45,0	1/1:8,7:15:42.10:795,42,0	1/1:6,6:12:26.78:467,27,0	0/0:32,0:32:96.30:0,96,2074	0/0:35,0:35:99:0,102,2171	0/0:32,0:31:93.12:0,93,2031	0/0:18,0:17:51.06:0,51,975
chr10	93635329	.	C	CCTT	6520.15	PASS	AB=0.679;AC=8;AF=0.143;AN=56;BaseQRankSum=17.793;DP=769;FS=0.691;HRun=0;HaplotypeScore=173.1064;InbreedingCoeff=-0.1669;MQ=68.08;MQ0=0;MQRankSum=-16.727;QD=32.12;ReadPosRankSum=2.336;VQSLOD=5.3136;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1834	0/0:10,0:10:30.10:0,30,558	0/0:27,0:26:75.21:0,75,1311	0/0:21,0:21:57.13:0,57,917	0/0:29,0:29:81.26:0,81,1430	0/1:8,22:30:91.33:1137,0,91	0/1:21,11:32:99:1030,0,203	0/0:28,0:28:75.26:0,75,1398	0/0:29,0:29:80.76:0,81,1463	0/0:38,0:38:99:0,108,1892	0/0:23,0:23:66.21:0,66,1160	0/1:11,16:28:99:1028,0,107	0/1:12,18:30:99:1097,0,121	0/1:13,16:29:63.97:1031,0,64	0/0:39,0:39:99:0,117,2092	0/0:44,0:44:99:0,129,2312	0/0:29,0:29:87.28:0,87,1567	0/0:16,0:16:46.71:0,47,826	0/0:24,0:23:72.23:0,72,1300	0/0:29,0:29:84.27:0,84,1526	0/0:30,0:30:90.31:0,90,1660	0/1:12,6:18:99:377,0,175	0/1:11,7:18:99:448,0,161	0/1:12,6:18:57.73:371,0,58	0/0:32,0:32:96.30:0,96,1701	0/0:35,0:35:99:0,102,1776	0/0:32,0:31:89.97:0,90,1660	0/0:17,0:16:21.65:0,22,688
chr10	93636123	.	TA	T	6367.76	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=0.822;DP=393;FS=4.084;HRun=7;HaplotypeScore=63.8240;InbreedingCoeff=0.9200;MQ=73.89;MQ0=0;MQRankSum=-3.734;QD=25.37;ReadPosRankSum=-1.822;VQSLOD=4.8751;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:66.21:0,66,830	1/1:2,5:7:15.03:153,15,0	0/0:17,0:14:8.72:0,9,120	0/0:9,1:8:4.66:0,5,59	1/1:3,16:19:48.09:483,48,0	0/0:15,0:15:39.12:0,39,490	0/0:6,0:6:18.06:0,18,226	1/1:5,28:33:84.15:838,84,0	1/1:4,10:14:27.05:275,27,0	1/1:1,19:20:57.13:581,57,0	1/1:2,26:28:68.95:666,69,0	0/0:7,0:7:18.06:0,18,226	0/0:10,0:10:24.08:0,24,301	0/0:6,0:6:6.02:0,6,75	1/1:1,11:12:36.05:357,36,0	1/1:0,14:14:33.08:337,33,0	0/0:21,0:21:60.19:0,60,750	1/1:1,9:10:27.06:275,27,0	1/1:1,14:15:42.09:428,42,0	1/1:3,8:11:18:173,18,0	1/1:3,2:5:6.01:61,6,0	0/0:5,0:5:12.04:0,12,151	0/0:7,0:7:9.02:0,9,103	0/0:9,0:9:12.04:0,12,151	1/1:2,17:19:48.11:487,48,0	1/1:1,13:14:42.09:428,42,0	1/1:0,18:18:51.12:520,51,0	1/1:1,11:12:30.06:306,30,0
chr10	93636144	.	C	CT	3833.60	PASS	AB=0.764;AC=47;AF=0.870;AN=54;BaseQRankSum=-1.082;DP=383;FS=1.003;HRun=12;HaplotypeScore=74.6378;InbreedingCoeff=0.1205;MQ=58.01;MQ0=5;MQRankSum=-3.358;QD=10.20;ReadPosRankSum=-0.603;VQSLOD=2.9872;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,17:29:14.81:343,0,15	1/1:8,2:9:14.93:118,15,0	0/1:10,0:7:1.01:1,0,1	0/0:6,0:3:5.73:0,6,34	1/1:13,10:25:12.32:253,12,0	1/1:10,0:19:14.68:72,15,0	0/1:3,0:8:7.54:43,0,8	1/1:18,7:23:8.59:233,9,0	1/1:6,5:11:19.26:172,19,0	1/1:11,4:16:14.60:167,15,0	0/1:12,8:20:10.83:216,0,11	1/1:7,1:11:11.53:72,12,0	1/1:7,0:8:6.98:31,7,0	1/1:1,0:3:5.68:28,6,0	1/1:5,7:11:2.13:182,2,0	1/1:6,3:10:13.25:113,13,0	1/1:5,23:28:57.09:553,57,0	0/1:10,2:14:5.31:138,0,5	1/1:9,1:13:20.21:130,20,0	1/1:3,3:10:23.80:164,24,0	./.	1/1:0,0:3:2.84:14,3,0	1/1:4,1:9:5.85:43,6,0	1/1:1,0:7:5.68:28,6,0	1/1:9,10:20:4.14:283,4,0	1/1:15,0:17:14.36:80,14,0	1/1:9,1:20:28.62:151,29,0	1/1:5,7:13:23.83:205,24,0
chr10	93638671	.	CAT	C	3077.77	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.700;DP=759;FS=10.121;HRun=0;HaplotypeScore=84.8061;InbreedingCoeff=0.9995;MQ=66.94;MQ0=4;MQRankSum=-4.065;QD=36.64;ReadPosRankSum=3.101;VQSLOD=5.7830;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,52:50:99:1883,117,0	0/0:9,0:9:27.05:0,27,507	0/0:31,0:30:87.29:0,87,1632	0/0:27,0:26:72.91:0,73,1343	0/0:36,0:36:99:0,108,1954	0/0:21,0:21:60.18:0,60,1145	0/0:21,0:21:63.22:0,63,1266	0/0:36,0:36:99:0,105,1983	0/0:26,0:26:78.23:0,78,1463	0/0:28,0:28:84.27:0,84,1639	0/0:19,0:19:57.18:0,57,1104	0/0:29,0:29:87.27:0,87,1694	0/0:25,0:25:75.21:0,75,1412	0/0:29,0:29:87.25:0,87,1632	0/0:38,0:38:99:0,114,2121	0/0:37,0:36:99:0,111,2072	1/1:0,32:31:81.28:1317,81,0	0/0:23,0:23:66.23:0,66,1339	0/0:18,0:18:51.06:0,51,880	0/0:27,0:27:81.26:0,81,1605	0/0:44,0:44:99:0,129,2454	0/0:22,0:22:66.12:0,66,1120	0/0:18,0:18:54.14:0,54,1054	0/0:36,0:36:99:0,108,2066	0/0:19,0:19:57.20:0,57,1156	0/0:25,0:25:75.25:0,75,1489	0/0:15,0:15:44.75:0,45,714	0/0:16,0:16:48.16:0,48,972
chr10	93641221	.	TAA	T	4786.94	PASS	AB=0.807;AC=28;AF=0.500;AN=56;BaseQRankSum=4.992;DP=524;FS=9.939;HRun=12;HaplotypeScore=76.3319;InbreedingCoeff=0.8397;MQ=59.25;MQ0=4;MQRankSum=-0.740;QD=19.30;ReadPosRankSum=3.869;VQSLOD=3.3791;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:33:62.26:0,62,219	0/0:12,0:12:24.07:0,24,339	0/1:5,0:3:11.25:11,0,37	0/0:9,0:8:20.25:0,20,216	0/0:33,0:36:98.69:0,99,1312	1/1:3,19:23:47.81:470,48,0	1/1:0,10:10:18.04:183,18,0	0/0:32,0:30:63.18:0,63,896	0/0:16,0:16:45.15:0,45,671	0/0:22,0:24:44.59:0,45,593	0/0:15,1:17:5.03:0,5,382	1/1:3,7:10:18.03:183,18,0	1/1:4,11:15:38.93:381,39,0	1/1:0,15:15:45.10:458,45,0	0/0:12,0:12:36.12:0,36,535	0/0:15,0:15:42.14:0,42,619	0/1:13,3:35:27.12:27,0,159	0/0:22,0:23:65.69:0,66,906	1/1:4,15:18:42.02:427,42,0	1/1:6,21:27:57.07:580,57,0	1/1:0,7:8:20.79:195,21,0	1/1:0,6:6:18.04:183,18,0	1/1:0,20:20:47.71:488,48,0	1/1:2,8:11:21.04:214,21,0	0/0:25,0:27:71.63:0,72,976	1/1:2,16:18:47.84:470,48,0	1/1:3,22:24:51.11:519,51,0	0/0:19,0:19:33.58:0,34,492
chr10	93641598	.	C	CCCACAACACGATCT	30893.03	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-14.189;DP=753;FS=8.419;HRun=0;HaplotypeScore=321.5890;InbreedingCoeff=0.6349;MQ=84.17;MQ0=0;MQRankSum=-17.744;QD=80.03;ReadPosRankSum=-2.041;VQSLOD=3.2623;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,4163	1/1:3,5:11:24.08:1517,24,0	0/0:29,0:29:50.05:0,50,2484	0/0:26,0:26:52.89:0,53,1830	1/1:14,16:38:48.16:2360,48,0	0/0:29,0:29:87.30:0,87,3465	0/0:12,0:12:33.10:0,33,1241	0/0:38,0:38:99:0,105,3861	1/1:10,12:31:63.22:3435,63,0	1/1:7,14:27:75.60:4330,76,0	1/1:4,13:28:51.18:2924,51,0	0/0:21,0:21:63.20:0,63,2435	0/0:27,0:27:81.26:0,81,3192	0/0:18,0:18:54.19:0,54,2057	1/1:11,23:44:99:6176,99,0	1/1:11,17:40:81.28:4932,81,0	0/0:27,0:27:81.28:0,81,3301	1/1:3,7:14:30.10:1992,30,0	0/1:19,0:19:76.61:77,0,128	0/1:21,0:21:99:106,0,205	0/1:27,0:27:99:119,0,252	0/0:32,0:32:93.29:0,93,3646	0/0:24,0:24:72.24:0,72,2815	0/0:30,0:30:90.24:0,90,3409	1/1:8,11:23:51.17:2735,51,0	0/1:27,0:27:99:180,0,207	0/1:36,0:35:11.87:12,0,381	0/0:18,0:18:51.17:0,51,2151
chr10	93641599	.	C	CCACA	15557.74	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=1.394;DP=680;FS=0.297;HRun=0;HaplotypeScore=207.6981;InbreedingCoeff=0.8346;MQ=88.16;MQ0=0;MQRankSum=-15.391;QD=49.71;ReadPosRankSum=2.238;VQSLOD=5.4384;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,2263	1/1:7,0:7:15.05:237,15,0	0/0:29,0:29:50.85:0,51,1480	0/0:27,0:27:60.40:0,60,1144	0/1:21,0:21:19.64:297,0,20	0/0:29,0:29:87.30:0,87,1812	0/0:12,0:12:36.09:0,36,677	0/0:36,0:36:99:0,105,2152	1/1:20,0:20:14.29:548,14,0	0/1:21,0:21:75.28:694,0,75	1/1:21,0:21:35.75:449,36,0	0/0:22,0:22:63.21:0,63,1270	0/0:27,0:27:81.26:0,81,1660	0/0:18,0:18:54.19:0,54,1116	1/1:32,0:32:7.92:1117,8,0	1/1:25,0:25:50.84:834,51,0	0/0:27,0:27:81.28:0,81,1698	1/1:8,0:8:21.07:359,21,0	1/1:3,12:16:45.14:1233,45,0	1/1:1,20:24:63.14:1661,63,0	1/1:4,28:32:81.23:2121,81,0	0/0:32,0:32:93.30:0,93,1908	0/0:24,0:24:72.25:0,72,1490	0/0:31,0:31:90.28:0,90,1810	1/1:15,0:15:9.65:409,10,0	1/1:5,24:31:90.28:2457,90,0	1/1:3,35:39:99:3143,111,0	0/0:17,0:17:51.18:0,51,1069
chr10	93643110	.	CAA	C	1820.33	PASS	AB=0.889;AC=17;AF=0.304;AN=56;BaseQRankSum=4.343;DP=441;FS=1.581;HRun=13;HaplotypeScore=59.8468;InbreedingCoeff=0.8071;MQ=67.54;MQ0=2;MQRankSum=0.865;QD=18.39;ReadPosRankSum=4.175;VQSLOD=2.8539;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:12:1.95:0,2,54	0/0:4,0:4:9.03:0,9,130	0/0:19,0:13:2.24:0,2,102	0/0:15,0:4:5.84:0,6,72	0/0:19,0:19:45.12:0,45,593	1/1:3,13:17:38.76:361,39,0	1/1:1,7:8:18.01:175,18,0	0/0:31,0:31:78.50:0,78,999	0/0:17,0:17:42.57:0,43,537	0/0:16,0:17:44.49:0,44,582	0/0:17,0:19:51.15:0,51,700	1/1:0,4:4:12.02:116,12,0	1/1:1,17:18:38.90:378,39,0	1/1:1,7:8:18.03:175,18,0	0/0:7,0:7:15.04:0,15,195	0/0:7,0:7:11.53:0,12,139	0/0:3,0:25:45.90:0,46,184	0/0:16,0:17:33.85:0,34,441	0/0:11,0:11:29.91:0,30,366	0/0:19,0:23:62.15:0,62,774	0/1:6,1:8:8.04:8,0,225	1/1:2,9:11:24.01:233,24,0	1/1:1,20:22:47.73:515,48,0	1/1:1,2:3:6:58,6,0	0/0:13,0:16:44.11:0,44,550	0/0:25,0:32:79.15:0,79,901	0/0:20,1:23:32.94:0,33,731	0/0:25,0:27:72.24:0,72,1026
chr10	93644829	.	G	GT	1972.41	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-10.858;DP=642;FS=6.369;HRun=5;HaplotypeScore=59.3533;InbreedingCoeff=0.9988;MQ=76.23;MQ0=0;MQRankSum=-1.135;QD=34.01;ReadPosRankSum=3.751;VQSLOD=4.0716;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:73.79:949,74,0	0/0:11,0:11:30.07:0,30,322	0/0:18,0:18:41.67:0,42,409	0/0:13,0:13:36.06:0,36,373	0/0:29,0:29:87.21:0,87,928	0/0:25,0:25:66.15:0,66,701	0/0:20,0:20:54.13:0,54,580	0/0:39,0:38:96.24:0,96,1031	0/0:22,0:22:63.11:0,63,652	0/0:31,0:31:87.20:0,87,923	0/0:21,0:20:57.13:0,57,604	0/0:25,0:25:75.17:0,75,791	0/0:18,0:18:54.11:0,54,565	0/0:21,0:21:57.12:0,57,602	0/0:25,0:25:72.16:0,72,765	0/0:24,0:24:66.17:0,66,709	1/1:1,30:31:87.28:1145,87,0	0/0:21,0:21:57.12:0,57,602	0/0:22,0:22:57.12:0,57,598	0/0:24,0:24:63.13:0,63,662	0/0:14,0:14:33.08:0,33,355	0/0:10,0:10:27.07:0,27,290	0/0:28,0:28:84.10:0,84,879	0/0:11,0:11:33.06:0,33,346	0/0:19,0:19:45.10:0,45,476	0/0:25,0:25:72.17:0,72,768	0/0:32,0:31:96.20:0,96,1012	0/0:36,0:36:99:0,108,1149
chr10	93645175	.	CA	C	1034.23	PASS	AB=0.780;AC=23;AF=0.411;AN=56;BaseQRankSum=4.201;DP=520;FS=2.727;HRun=16;HaplotypeScore=66.9616;InbreedingCoeff=0.4347;MQ=66.37;MQ0=7;MQRankSum=1.245;QD=4.10;ReadPosRankSum=5.794;VQSLOD=0.7504;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:5,4:9:7.61:72,0,8	0/1:6,7:15:19.69:62,0,20	0/0:36,1:15:14.83:0,15,102	0/0:22,0:8:8.79:0,9,53	1/1:9,14:23:36.96:217,37,0	0/0:19,1:20:18.66:0,19,236	0/1:8,1:9:0.15:0,0,98	0/0:23,0:29:15.26:0,15,302	1/1:7,3:10:5.66:36,6,0	1/1:8,7:15:17.53:107,18,0	1/1:12,14:26:16.50:167,16,0	0/0:9,1:11:2.79:0,3,117	0/0:9,1:11:5.87:0,6,131	0/1:10,1:10:6.03:6,0,60	0/1:5,7:12:10.45:57,0,10	1/1:6,5:11:10.61:59,11,0	1/1:3,0:24:30.06:86,30,0	1/1:11,5:17:17.66:140,18,0	0/1:10,3:14:44.61:45,0,80	0/1:23,4:27:27.14:27,0,223	0/0:13,0:13:20.96:0,21,172	0/0:12,0:15:23.65:0,24,177	0/0:16,4:21:5.28:0,5,231	0/0:11,0:11:18.25:0,18,131	1/1:10,12:24:27.26:144,27,0	0/0:24,0:25:10.47:0,10,291	0/0:27,1:29:21.01:0,21,443	0/0:22,1:23:5.96:0,6,158
chr10	93645558	.	CAGTA	C	6057.96	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=8.914;DP=602;FS=0.000;HRun=0;HaplotypeScore=105.3376;InbreedingCoeff=0.9987;MQ=85.81;MQ0=0;MQRankSum=-2.863;QD=41.49;ReadPosRankSum=4.372;VQSLOD=5.2192;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.22:0,69,1820	0/0:7,0:7:21.07:0,21,575	0/0:22,0:22:54.08:0,54,1207	0/0:21,0:21:63.19:0,63,1536	0/0:28,0:28:78.27:0,78,2105	1/1:3,27:30:54.15:1046,54,0	1/1:0,15:15:33.11:639,33,0	0/0:36,0:36:99:0,102,2618	0/0:14,0:14:42.14:0,42,1142	0/0:24,0:24:72.25:0,72,1960	0/0:23,0:23:60.19:0,60,1586	1/1:1,16:17:36.12:698,36,0	1/1:1,18:19:44.98:870,45,0	1/1:0,10:10:24.08:465,24,0	0/0:23,0:23:66.21:0,66,1732	0/0:30,0:30:87.28:0,87,2274	0/0:30,0:30:90.24:0,90,2342	0/0:20,0:20:60.21:0,60,1630	0/0:15,0:15:39.13:0,39,1069	0/0:31,0:31:84.23:0,84,2165	0/0:12,0:12:36.08:0,36,812	1/1:1,19:20:45.11:828,45,0	1/1:2,20:22:51.17:988,51,0	1/1:2,11:13:27.09:523,27,0	0/0:14,0:14:36.08:0,36,910	0/0:29,0:29:81.27:0,81,2123	0/0:24,0:23:72.25:0,72,1952	0/0:27,0:27:75.26:0,75,1998
chr10	93646356	.	AACACACAC	A	9005.19	PASS	AB=0.799;AC=32;AF=0.571;AN=56;BaseQRankSum=1.785;DP=712;FS=28.573;HRun=0;HaplotypeScore=249.5077;InbreedingCoeff=0.3699;MQ=56.08;MQ0=9;MQRankSum=-8.981;QD=18.27;ReadPosRankSum=0.203;VQSLOD=2.8002;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:36:19.39:0,19,715	1/1:1,5:7:15.01:302,15,0	0/0:28,0:18:3.01:0,3,43	0/0:22,0:15:0.47:0,0,1	1/1:12,14:26:20.54:306,21,0	1/1:9,0:21:1.17:120,1,0	0/1:20,0:25:24.36:24,0,126	0/1:27,0:24:18.42:18,0,48	1/1:18,13:30:32.49:954,32,0	1/1:33,12:47:59.90:1280,60,0	1/1:13,13:28:29.77:602,30,0	1/1:14,1:33:12.80:271,13,0	0/1:15,3:30:0.14:439,0,0	1/1:5,3:24:19.71:313,20,0	1/1:16,14:31:54.18:1217,54,0	1/1:14,24:38:63.21:1497,63,0	0/0:17,0:26:32.24:0,32,707	0/1:20,4:25:59.20:643,0,59	0/1:11,0:13:0.03:0,0,208	0/0:22,0:25:27.09:0,27,509	0/0:12,0:23:51.07:0,51,1044	0/1:11,1:19:39.35:98,0,39	0/1:6,0:17:23.88:108,0,24	0/1:21,0:25:5.82:103,0,6	1/1:11,4:16:14.56:409,15,0	0/0:26,0:31:1.32:0,1,937	0/0:22,0:27:27.08:0,27,518	1/1:1,7:8:12.04:301,12,0
chr10	93646552	.	AAC	A	4338.87	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-6.889;DP=892;FS=0.394;HRun=0;HaplotypeScore=169.5657;InbreedingCoeff=0.9672;MQ=57.77;MQ0=11;MQRankSum=3.578;QD=13.56;ReadPosRankSum=4.097;VQSLOD=4.8207;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:41:26.48:216,26,0	0/0:5,0:19:23.97:0,24,231	0/0:41,0:23:14.93:0,15,158	0/0:46,0:20:6.39:0,6,59	0/0:9,0:29:32.79:0,33,275	1/1:6,10:16:14.83:153,15,0	1/1:15,22:38:23.40:487,23,0	0/0:20,0:31:31.91:0,32,264	0/0:9,0:31:33.14:0,33,362	0/0:14,0:38:65.94:0,66,595	0/0:17,0:33:40.85:0,41,428	1/1:8,24:32:47.94:544,48,0	1/1:6,14:20:26.75:292,27,0	1/1:8,26:33:23.08:424,23,0	0/0:10,0:36:48.14:0,48,491	0/0:17,0:43:57.02:0,57,560	1/1:6,18:24:33.57:388,34,0	0/0:17,1:39:12.88:0,13,406	0/0:9,0:13:13.23:0,13,97	0/0:7,0:29:31.80:0,32,218	0/0:32,0:32:16.48:0,16,111	1/1:10,19:30:27.74:500,28,0	1/1:9,24:34:41.01:561,41,0	1/1:21,28:50:59.39:774,59,0	0/0:9,0:25:33.44:0,33,306	0/0:9,0:30:24.39:0,24,179	0/0:6,0:29:14.82:0,15,109	0/0:3,0:19:30.02:0,30,298
chr10	93646657	.	GCTC	G	1096.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.501;DP=668;FS=0.736;HRun=0;HaplotypeScore=101.8792;InbreedingCoeff=0.9980;MQ=95.02;MQ0=0;MQRankSum=-2.953;QD=24.92;ReadPosRankSum=1.797;VQSLOD=3.2749;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,34:44:78.26:1192,78,0	0/0:10,0:10:27.08:0,27,539	0/0:35,0:35:83.96:0,84,1707	0/0:33,0:33:52.90:0,53,1265	0/0:18,0:18:54.17:0,54,1101	0/0:20,0:20:60.19:0,60,1248	0/0:16,0:16:45.14:0,45,926	0/0:29,0:29:63.20:0,63,1255	0/0:23,0:23:69.24:0,69,1481	0/0:37,0:37:90.31:0,90,1912	0/0:13,0:13:33.11:0,33,708	0/0:31,0:31:81.28:0,81,1738	0/0:15,0:15:42.10:0,42,853	0/0:22,0:22:51.18:0,51,1069	0/0:26,0:26:72.25:0,72,1546	0/0:28,0:28:81.28:0,81,1726	0/0:30,0:30:81.28:0,81,1718	0/0:19,0:19:57.20:0,57,1222	0/0:19,0:19:45.15:0,45,921	0/0:24,0:24:66.23:0,66,1417	0/0:43,0:43:99:0,99,2111	0/0:18,0:18:48.16:0,48,1030	0/0:27,0:27:66.23:0,66,1388	0/0:24,0:24:57.18:0,57,1183	0/0:19,0:19:57.20:0,57,1201	0/0:13,0:13:36.12:0,36,769	0/0:21,0:21:54.19:0,54,1157	0/0:10,0:10:30.10:0,30,641
chr10	93647931	.	TTAA	T	1293.61	PASS	AB=1.000;AC=34;AF=0.810;AN=42;BaseQRankSum=3.829;DP=311;FS=0.985;HRun=0;HaplotypeScore=51.0089;InbreedingCoeff=0.4844;MQ=69.49;MQ0=2;MQRankSum=-1.715;QD=6.25;ReadPosRankSum=3.278;VQSLOD=1.8884;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,2:21:12.04:149,12,0	1/1:3,2:5:6.02:79,6,0	./.	./.	0/0:6,0:12:21:0,21,258	1/1:8,0:11:9.40:64,9,0	./.	0/0:30,0:30:18.04:0,18,241	1/1:4,4:8:6.02:79,6,0	1/1:6,2:8:3.01:40,3,0	1/1:7,2:9:6.02:79,6,0	1/1:10,0:12:2.98:21,3,0	1/1:7,0:10:5.95:42,6,0	1/1:5,0:7:5.95:42,6,0	1/1:10,0:10:9.03:117,9,0	1/1:5,4:9:12.04:158,12,0	0/1:26,0:26:4.54:5,0,52	1/1:8,9:18:24.04:298,24,0	./.	1/1:12,0:12:8.83:55,9,0	./.	./.	1/1:6,0:8:0.89:2,1,0	./.	1/1:7,5:12:9.03:119,9,0	0/1:10,0:10:6.02:30,0,6	1/1:10,0:9:8.80:53,9,0	0/0:16,0:15:33.11:0,33,621
chr10	93648721	.	G	GC	3061.39	PASS	AB=0.709;AC=40;AF=0.714;AN=56;BaseQRankSum=-2.507;DP=358;FS=6.152;HRun=10;HaplotypeScore=44.7754;InbreedingCoeff=0.1760;MQ=83.68;MQ0=0;MQRankSum=0.613;QD=11.05;ReadPosRankSum=-1.245;VQSLOD=1.9121;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:37.25:0,37,406	0/0:5,0:5:2.98:0,3,25	0/0:16,0:16:10.57:0,11,91	0/1:14,0:13:31.96:32,0,75	1/1:4,5:9:15.04:159,15,0	1/1:5,10:16:21.05:224,21,0	0/1:7,18:25:1.20:386,0,1	1/1:7,2:9:3.01:32,3,0	1/1:1,13:14:20.16:278,20,0	1/1:0,5:5:12:117,12,0	1/1:1,5:6:8.92:80,9,0	0/1:3,10:13:6.72:142,0,7	0/1:6,9:15:43.81:153,0,44	1/1:0,5:5:12.03:128,12,0	1/1:1,15:16:8.44:295,8,0	0/1:6,8:14:27.72:140,0,28	0/0:34,0:36:93.90:0,94,742	0/1:4,8:12:28.39:139,0,28	0/1:5,1:10:6.97:81,0,7	1/1:2,1:6:2.84:14,3,0	1/1:6,0:12:8.52:43,9,0	1/1:1,3:4:5.95:50,6,0	1/1:0,3:3:6.02:64,6,0	1/1:12,16:29:3.45:393,3,0	0/1:4,0:4:12.57:55,0,13	1/1:6,0:10:8.79:55,9,0	1/1:4,1:15:19.96:115,20,0	1/1:2,0:11:8.72:55,9,0
chr10	93649075	.	CT	C	1232.54	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-2.448;DP=274;FS=19.198;HRun=2;HaplotypeScore=62.3805;InbreedingCoeff=0.8875;MQ=69.03;MQ0=4;MQRankSum=0.036;QD=12.58;ReadPosRankSum=-1.431;VQSLOD=0.7398;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:41.82:0,42,382	1/1:4,0:4:8.86:60,9,0	0/0:33,0:18:28.01:0,28,305	0/0:19,0:9:11.70:0,12,70	1/1:10,0:10:11.96:82,12,0	0/0:5,0:5:11.89:0,12,108	0/0:16,1:17:37.96:0,38,286	0/0:11,0:11:28.20:0,28,232	1/1:5,0:6:14.84:104,15,0	1/1:8,2:10:23.96:213,24,0	1/1:5,0:5:9.63:66,10,0	0/0:11,0:11:30.60:0,31,314	0/0:8,0:8:17.95:0,18,157	0/0:5,0:5:10.26:0,10,113	1/1:10,0:7:11.45:87,11,0	0/0:1,0:1:2.04:0,2,6	0/0:16,0:16:32.85:0,33,397	1/1:7,0:7:11.65:79,12,0	1/1:7,2:10:28.86:215,29,0	1/1:6,0:6:11.85:80,12,0	1/1:4,0:4:5.94:43,6,0	0/0:10,0:10:27.01:0,27,296	0/0:4,0:4:8.94:0,9,84	0/0:13,0:13:31.73:0,32,306	1/1:5,0:5:11.94:94,12,0	1/1:10,0:10:9.38:167,9,0	1/1:11,0:11:25.76:159,26,0	0/0:6,0:6:17.97:0,18,146
chr10	93649689	.	G	GAA	3978.14	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=6.689;DP=371;FS=6.730;HRun=13;HaplotypeScore=70.9085;InbreedingCoeff=0.9464;MQ=70.95;MQ0=0;MQRankSum=-8.551;QD=21.86;ReadPosRankSum=-3.624;VQSLOD=2.0877;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:14,3:21:38.96:391,39,0	0/0:6,0:7:17.17:0,17,114	0/0:13,0:10:10.96:0,11,66	0/0:12,0:8:7.75:0,8,51	0/0:21,0:23:56.37:0,56,472	1/1:6,5:13:31.90:303,32,0	1/1:4,6:11:26.20:284,26,0	0/0:14,0:16:20.33:0,20,156	0/0:11,0:14:26.40:0,26,208	0/0:13,0:16:32.39:0,32,261	0/0:15,0:18:11.31:0,11,179	1/1:2,2:8:11.01:99,11,0	1/1:2,4:7:15.04:191,15,0	1/1:3,4:7:17.99:207,18,0	0/0:11,0:11:26.93:0,27,238	0/0:15,0:15:23.92:0,24,211	1/1:10,1:17:26.52:254,27,0	0/0:11,0:14:26.32:0,26,253	1/1:2,4:6:12.04:163,12,0	1/1:9,8:19:17.64:441,18,0	1/1:4,4:8:20.98:229,21,0	1/1:1,2:5:11.52:118,12,0	1/1:3,4:7:17.54:207,18,0	1/1:5,2:7:12.02:134,12,0	0/0:15,0:16:11.28:0,11,251	1/1:19,7:26:38.84:454,39,0	1/1:9,9:20:41.56:503,42,0	0/0:13,0:14:32.63:0,33,276
chr10	93649721	.	AT	A	4767.46	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=8.833;DP=319;FS=0.957;HRun=5;HaplotypeScore=51.7996;InbreedingCoeff=0.9311;MQ=62.38;MQ0=0;MQRankSum=-8.097;QD=29.43;ReadPosRankSum=-1.356;VQSLOD=4.5947;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:16:33.09:373,33,0	0/0:9,0:9:27.09:0,27,369	0/0:6,0:5:9.03:0,9,109	0/0:6,0:5:2.68:0,3,11	0/0:17,0:17:51.17:0,51,697	1/1:1,8:9:27.06:296,27,0	1/1:2,11:13:30.09:340,30,0	0/0:18,0:18:51.17:0,51,697	0/0:11,0:11:30.10:0,30,410	0/0:12,0:12:36.12:0,36,492	0/0:13,0:13:36.12:0,36,492	1/1:0,3:3:9.03:102,9,0	1/1:3,4:7:18.05:202,18,0	1/1:2,4:6:15.02:158,15,0	0/0:11,0:11:30.10:0,30,410	0/0:9,0:9:18.06:0,18,246	1/1:2,12:14:30.08:337,30,0	0/0:14,0:14:39.09:0,39,508	1/1:0,18:18:54.11:598,54,0	1/1:1,17:18:51.14:577,51,0	1/1:1,2:3:6.02:68,6,0	1/1:0,4:4:12.03:136,12,0	1/1:1,5:6:18.04:195,18,0	1/1:2,4:6:12.03:134,12,0	0/0:17,0:17:45.15:0,45,616	1/1:1,23:24:72.20:810,72,0	1/1:1,13:14:39.11:442,39,0	0/0:14,0:14:33.11:0,33,452
chr10	93649765	.	GTC	G	60.11	PASS	AB=0.986;AC=18;AF=0.321;AN=56;BaseQRankSum=3.080;DP=340;FS=28.446;HRun=0;HaplotypeScore=64.0893;InbreedingCoeff=-0.3197;MQ=58.75;MQ0=5;MQRankSum=-1.714;QD=0.34;ReadPosRankSum=5.259;VQSLOD=0.0692;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,1:12:4.64:0,5,98	0/0:10,0:10:15.27:0,15,100	0/0:18,0:4:2.15:0,2,46	0/1:16,0:7:12.02:12,0,68	0/1:10,1:11:21:21,0,52	0/1:11,0:10:19.83:20,0,59	0/1:12,0:11:6.73:7,0,75	0/0:26,0:26:56.59:0,57,471	0/1:7,0:7:1.86:2,0,41	0/1:14,0:14:15.66:16,0,86	0/1:11,1:11:23.96:24,0,91	1/1:2,0:2:2.22:7,2,0	0/1:7,0:7:2.50:2,0,13	0/1:7,0:7:14.80:15,0,37	0/1:7,0:7:9.22:9,0,69	0/0:7,0:7:8.95:0,9,78	0/1:16,0:16:9.69:10,0,91	0/0:14,0:14:8.24:0,8,121	0/0:17,0:17:21.51:0,22,224	0/1:19,0:19:8.88:9,0,119	0/1:5,0:5:2.67:3,0,19	0/0:4,0:4:6.75:0,7,30	0/1:8,0:7:0.17:0,0,32	0/1:11,0:11:14.01:14,0,74	0/0:19,0:19:9.98:0,10,227	0/0:23,0:23:23.16:0,23,225	0/1:12,1:13:30.11:30,0,95	0/0:8,0:8:6.16:0,6,49
chr10	93649767	.	CTT	C	2196.40	PASS	AB=0.714;AC=46;AF=0.821;AN=56;BaseQRankSum=-0.965;DP=341;FS=2.633;HRun=16;HaplotypeScore=56.3875;InbreedingCoeff=0.2006;MQ=58.20;MQ0=9;MQRankSum=0.503;QD=7.30;ReadPosRankSum=3.611;VQSLOD=-0.0798;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:11,4:12:13.09:49,0,13	1/1:5,4:10:14.47:112,14,0	0/0:18,0:4:2.68:0,3,11	0/0:16,0:7:3.31:0,3,46	1/1:7,5:12:17.92:150,18,0	1/1:6,5:10:14.59:112,15,0	1/1:6,4:11:11.75:100,12,0	0/1:17,6:24:20.79:90,0,21	1/1:4,3:7:11.92:100,12,0	1/1:5,6:13:8.41:103,8,0	1/1:7,5:11:11.73:100,12,0	1/1:1,1:2:2.99:24,3,0	1/1:4,3:7:5.94:50,6,0	1/1:4,2:7:4.13:47,4,0	1/1:6,2:7:3.39:26,3,0	0/0:2,4:6:3.01:0,3,39	1/1:10,7:16:17.62:150,18,0	0/1:5,8:14:10.92:92,0,11	1/1:14,1:16:8.63:55,9,0	1/1:10,9:19:19.79:152,20,0	1/1:3,3:5:8.95:72,9,0	1/1:0,2:4:8.41:49,8,0	1/1:3,5:7:7.67:73,8,0	1/1:5,8:12:11.76:100,12,0	0/1:11,7:18:19.95:104,0,20	1/1:13,9:22:30.11:233,30,0	1/1:7,5:13:13.91:105,14,0	1/1:3,5:9:11.70:87,12,0
chr10	93649782	.	TTC	T	86.28	PASS	AB=0.976;AC=16;AF=0.296;AN=54;BaseQRankSum=3.948;DP=288;FS=16.587;HRun=0;HaplotypeScore=49.8387;InbreedingCoeff=-0.1635;MQ=53.03;MQ0=14;MQRankSum=1.609;QD=0.61;ReadPosRankSum=6.593;VQSLOD=-0.3659;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:12:0.94:0,1,23	0/0:7,0:7:4.55:0,5,41	./.	0/1:11,0:6:17.67:18,0,22	0/1:9,1:10:9.19:32,0,9	0/1:9,0:8:5.89:6,0,12	0/0:11,0:10:5.71:0,6,61	0/1:16,1:17:13.92:14,0,105	1/1:6,0:6:5.86:24,6,0	0/0:14,0:14:24.53:0,25,163	0/0:10,1:10:0.97:0,1,26	0/1:5,1:5:15.96:16,0,45	1/1:4,1:4:5.74:39,6,0	0/1:7,0:7:3.42:3,0,19	0/0:4,0:3:2.79:0,3,16	0/0:7,0:7:8.98:0,9,90	0/1:17,0:16:8.98:9,0,71	0/0:18,0:17:21.64:0,22,149	0/0:8,0:5:1.62:0,2,17	0/0:14,0:14:3.83:0,4,51	0/0:7,0:6:1.31:0,1,21	0/0:6,0:6:0.56:0,1,38	0/0:9,1:9:0.21:0,0,29	0/1:11,0:10:13.12:13,0,15	0/1:14,0:14:30.78:31,0,40	0/1:11,0:11:0.18:0,0,34	0/1:10,0:10:2.84:3,0,36	0/1:7,0:7:2.43:10,0,2
chr10	93649915	.	T	TATAC	15978.81	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-5.628;DP=459;FS=3.621;HRun=0;HaplotypeScore=74.5048;InbreedingCoeff=0.9870;MQ=69.45;MQ0=0;MQRankSum=-9.434;QD=62.17;ReadPosRankSum=1.592;VQSLOD=6.8334;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:36:81.28:2156,81,0	0/0:6,0:6:18.05:0,18,305	0/0:11,0:11:30.10:0,30,548	0/0:20,0:20:44.72:0,45,838	0/0:18,0:18:54.19:0,54,1000	1/1:1,13:14:39.13:998,39,0	1/1:4,14:19:36.12:957,36,0	0/0:20,0:19:51.17:0,51,919	0/0:11,0:11:33.11:0,33,595	0/0:21,0:21:51.17:0,51,952	0/0:21,0:21:60.19:0,60,1070	1/1:2,10:12:36.12:957,36,0	1/1:3,6:10:18.06:478,18,0	1/1:2,13:16:42.14:1107,42,0	0/0:15,0:15:42.12:0,42,715	0/0:8,0:8:24.08:0,24,448	1/1:5,24:30:69.24:1839,69,0	0/0:23,0:23:63.19:0,63,1127	1/1:4,17:19:51.17:1318,51,0	1/1:5,14:19:39.13:1039,39,0	1/1:3,13:17:30.03:759,30,0	1/1:1,5:6:15.05:399,15,0	1/1:0,9:9:27.09:719,27,0	1/1:2,3:7:9.03:238,9,0	0/0:14,0:14:42.14:0,42,784	1/1:2,22:24:69.24:1816,69,0	1/1:2,14:16:45.15:1198,45,0	0/0:14,0:14:36.12:0,36,672
chr10	93650841	.	GAGAGAGAA	G	5802.95	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-8.379;DP=388;FS=0.502;HRun=0;HaplotypeScore=114.5359;InbreedingCoeff=-0.0422;MQ=61.55;MQ0=6;MQRankSum=-0.116;QD=16.97;ReadPosRankSum=5.298;VQSLOD=2.9538;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:20:99:130,0,118	0/1:6,0:5:28.90:32,0,29	0/0:24,0:12:26.71:0,27,255	0/0:22,0:16:35.04:0,35,404	0/1:22,0:22:96.64:197,0,97	1/1:9,1:9:27.04:359,27,0	1/1:16,0:15:44.87:385,45,0	1/1:23,0:23:33.04:477,33,0	0/1:8,0:8:50.43:75,0,50	0/1:11,0:11:99:111,0,118	0/1:10,0:10:5.25:117,0,5	1/1:12,3:15:45.06:727,45,0	1/1:11,0:11:29.89:243,30,0	0/1:6,0:6:0.05:140,0,0	1/1:14,0:14:9.66:151,10,0	0/1:20,0:19:35.62:200,0,36	0/1:22,0:22:99:198,0,274	0/1:15,0:12:4.16:115,0,4	1/1:18,0:18:45.86:402,46,0	1/1:12,0:12:25.73:200,26,0	1/1:10,0:10:29.96:256,30,0	1/1:8,1:8:23.99:267,24,0	1/1:6,1:7:20.99:257,21,0	1/1:10,1:11:23.86:236,24,0	0/1:12,0:10:99:107,0,130	0/1:10,0:10:99:105,0,147	0/1:19,0:19:1.90:236,0,2	1/1:3,0:3:9:79,9,0
chr10	93650918	.	AG	A	932.96	PASS	AB=0.991;AC=22;AF=0.393;AN=56;BaseQRankSum=1.904;DP=411;FS=0.000;HRun=2;HaplotypeScore=123.0663;InbreedingCoeff=-0.5185;MQ=35.20;MQ0=10;MQRankSum=-1.117;QD=2.90;ReadPosRankSum=1.849;VQSLOD=0.0126;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,1:21:65.01:65,0,153	0/1:9,0:7:12.84:13,0,37	0/0:16,0:5:11.52:0,12,131	0/0:19,0:3:9.03:0,9,128	0/1:34,0:34:80.99:81,0,242	0/1:15,0:15:11.39:84,0,11	0/0:15,0:9:18.06:0,18,253	0/0:14,1:9:6.68:0,7,27	0/1:15,0:15:22.99:23,0,83	0/1:25,0:23:55.93:56,0,155	0/1:21,0:21:51.80:52,0,86	0/1:11,0:11:27.38:46,0,27	1/1:12,0:12:5.84:57,6,0	0/0:8,0:3:6.02:0,6,89	0/1:17,0:17:67.88:68,0,70	0/1:15,0:14:13.42:13,0,74	0/1:14,0:13:99:118,0,101	0/1:15,0:13:2.55:3,0,56	0/1:14,0:8:10.95:11,0,205	0/1:12,0:12:6.61:7,0,152	0/1:3,0:3:22.80:23,0,26	0/0:4,0:1:3.01:0,3,35	0/1:7,0:7:17.78:61,0,18	0/1:9,1:8:72:80,0,72	0/1:19,1:18:45.99:46,0,178	0/1:14,0:14:50:50,0,180	0/1:15,0:15:99:133,0,130	0/0:12,0:12:31.45:0,31,143
chr10	93650920	.	GAAAGAAAGAAAGGAAAGA	G	4467.52	PASS	AB=0.815;AC=22;AF=0.393;AN=56;BaseQRankSum=-6.737;DP=416;FS=2.677;HRun=0;HaplotypeScore=201.0295;InbreedingCoeff=0.2705;MQ=35.56;MQ0=10;MQRankSum=-1.757;QD=23.03;ReadPosRankSum=-0.775;VQSLOD=3.6442;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:20:75.29:152,0,75	0/0:9,0:7:14.94:0,15,342	0/0:16,0:6:15.52:0,16,489	0/0:19,0:3:9.03:0,9,412	0/0:34,0:34:82.18:0,82,1533	1/1:1,15:16:3.59:416,4,0	0/1:15,0:9:1.34:269,0,1	0/0:16,0:10:9.03:0,9,250	0/0:16,0:16:23.27:0,23,737	0/0:25,0:23:65.31:0,65,1065	0/0:21,0:21:45.66:0,46,759	0/1:3,8:11:1.55:268,0,2	1/1:0,12:12:5.81:280,6,0	1/1:8,0:3:5.97:99,6,0	0/0:19,0:19:30.36:0,30,635	0/0:13,0:12:29.20:0,29,483	1/1:11,0:12:24.43:485,24,0	0/1:15,0:15:1:1,0,485	0/1:11,3:8:13.20:196,0,13	0/1:4,8:12:54.07:119,0,54	0/1:3,0:3:8.11:194,0,8	1/1:6,0:3:8.77:152,9,0	1/1:1,6:7:8.06:289,8,0	0/1:9,0:7:10.76:122,0,11	0/0:20,0:18:45.39:0,45,835	0/1:6,9:15:81.57:533,0,82	0/1:4,10:14:30.28:892,0,30	0/0:12,0:12:16.90:0,17,589
chr10	93650923	.	A	AG	2044.06	PASS	AB=0.761;AC=12;AF=0.214;AN=56;BaseQRankSum=0.617;DP=413;FS=0.000;HRun=1;HaplotypeScore=119.5861;InbreedingCoeff=-0.2933;MQ=35.57;MQ0=10;MQRankSum=-2.639;QD=9.87;ReadPosRankSum=3.069;VQSLOD=1.5044;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:19:25.26:0,25,198	0/1:6,2:6:1.69:2,0,103	0/0:18,0:6:14.97:0,15,138	0/0:21,0:4:11.95:0,12,134	0/1:21,12:33:99:455,0,218	0/0:16,0:16:0.73:0,1,44	0/0:13,0:8:20.34:0,20,191	0/1:18,0:12:11.02:11,0,68	0/1:10,7:17:99:164,0,187	0/1:14,11:23:99:392,0,227	0/1:12,9:21:99:284,0,172	0/0:11,0:11:7.76:0,8,46	0/0:12,0:12:5.90:0,6,38	0/0:8,0:3:6.02:0,6,77	0/1:9,9:18:99:198,0,141	0/1:8,5:12:99:156,0,110	0/0:13,0:12:23.62:0,24,193	0/1:10,6:15:60.47:60,0,137	0/0:13,0:8:20.78:0,21,206	0/0:12,0:12:15:0,15,162	0/0:4,0:4:11.69:0,12,100	0/0:6,0:3:6.85:0,7,46	0/1:7,0:7:5.37:5,0,28	0/0:9,0:7:17.51:0,18,145	0/1:14,6:18:99:184,0,306	0/0:14,0:14:23.89:0,24,256	0/0:14,0:14:27.64:0,28,210	0/1:4,7:11:51.71:274,0,52
chr10	93650933	.	GA	G	1300.24	PASS	AB=0.912;AC=21;AF=0.375;AN=56;BaseQRankSum=2.230;DP=425;FS=7.711;HRun=3;HaplotypeScore=121.4943;InbreedingCoeff=0.1374;MQ=37.50;MQ0=10;MQRankSum=-2.730;QD=7.22;ReadPosRankSum=-0.068;VQSLOD=0.1521;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,9:17:67.89:223,0,68	0/0:8,0:6:12.04:0,12,172	0/0:28,0:9:18.53:0,19,245	0/0:27,0:9:24.55:0,25,310	0/0:29,0:29:76.49:0,76,1045	1/1:16,0:16:9.02:98,9,0	0/1:7,6:9:81.80:82,0,87	0/0:27,0:21:33.08:0,33,436	0/0:16,0:16:34.35:0,34,450	0/0:25,0:23:64.89:0,65,856	0/0:23,0:23:36.27:0,36,622	0/1:9,0:9:10.72:57,0,11	1/1:12,0:12:5.85:68,6,0	0/1:8,2:5:31.64:55,0,32	0/0:19,0:19:20.53:0,21,478	0/0:14,0:13:33.09:0,33,425	1/1:2,8:9:7.95:169,8,0	0/1:15,1:15:3.19:3,0,292	0/1:9,0:7:50.22:50,0,114	0/1:11,0:11:11.08:11,0,70	1/1:3,5:8:17.11:185,17,0	0/1:5,0:3:7.91:50,0,8	1/1:7,0:7:6.02:65,6,0	0/1:8,1:7:30.70:59,0,31	0/0:18,0:16:39.13:0,39,535	0/1:13,0:13:99:110,0,175	0/1:13,0:13:53.62:194,0,54	0/0:11,0:11:33.11:0,33,439
chr10	93650934	.	A	AAGG	1835.61	PASS	AB=0.934;AC=20;AF=0.357;AN=56;BaseQRankSum=0.783;DP=429;FS=10.462;HRun=0;HaplotypeScore=130.9954;InbreedingCoeff=0.1579;MQ=37.79;MQ0=9;MQRankSum=-3.593;QD=11.19;ReadPosRankSum=-0.319;VQSLOD=2.6213;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:18:77.73:117,0,78	0/0:8,0:6:10.84:0,11,197	0/0:30,0:9:17.78:0,18,287	0/0:27,0:10:22.79:0,23,353	0/0:31,0:31:75.64:0,76,1043	1/1:15,0:15:9.03:165,9,0	0/1:13,0:9:25.45:107,0,25	0/0:27,0:21:29.59:0,30,481	0/0:17,0:17:35.68:0,36,501	0/0:25,0:23:65.90:0,66,772	0/0:23,0:23:50.64:0,51,671	0/1:9,0:9:10.75:106,0,11	1/1:12,0:12:5.84:105,6,0	0/1:10,0:5:4.10:98,0,4	0/0:18,0:18:36.08:0,36,520	0/0:14,0:13:33.08:0,33,458	1/1:10,0:9:6.26:92,6,0	0/0:16,0:15:22.41:0,22,338	0/1:9,0:7:98.10:98,0,141	0/1:11,0:11:33.61:34,0,64	1/1:7,1:8:1.71:229,2,0	0/1:3,2:3:7.56:122,0,8	1/1:7,0:7:6.02:103,6,0	0/1:5,4:7:28.77:96,0,29	0/0:18,0:16:35.63:0,36,535	0/1:13,0:13:99:184,0,132	0/1:12,1:13:27.26:353,0,27	0/0:11,0:11:32.98:0,33,359
chr10	93650937	.	GA	G	1402.98	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=2.271;DP=423;FS=3.422;HRun=3;HaplotypeScore=119.3085;InbreedingCoeff=0.4576;MQ=38.69;MQ0=10;MQRankSum=-1.579;QD=8.77;ReadPosRankSum=0.598;VQSLOD=1.0998;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:18:32.34:230,0,32	0/0:10,0:8:18.06:0,18,255	0/0:32,0:11:24.55:0,25,337	0/0:28,0:12:33.35:0,33,417	0/0:29,0:29:81.27:0,81,1161	1/1:15,0:15:9.02:101,9,0	0/1:14,0:10:7.67:86,0,8	0/0:25,0:21:36.12:0,36,518	0/0:15,3:18:8.18:0,8,505	0/0:23,2:23:25.22:0,25,781	0/0:18,3:21:47.97:0,48,684	1/1:8,0:8:6.01:64,6,0	1/1:12,0:12:5.85:64,6,0	0/1:9,0:4:1.42:60,0,1	0/0:17,1:18:36.12:0,36,516	0/0:12,1:12:33.06:0,33,442	1/1:10,0:9:18.21:177,18,0	0/0:14,0:13:26.92:0,27,350	0/1:9,0:6:47.43:47,0,51	0/1:10,0:10:15.11:15,0,21	1/1:8,0:8:17.73:188,18,0	1/1:4,0:2:6.01:63,6,0	1/1:6,0:6:6.02:69,6,0	0/1:10,0:8:6.69:65,0,7	0/0:16,2:16:39.13:0,39,551	0/1:13,0:13:45.03:152,0,45	1/1:12,0:12:18.24:214,18,0	0/0:12,0:12:36.12:0,36,514
chr10	93650940	.	AG	A	511.43	PASS	AB=0.959;AC=23;AF=0.411;AN=56;BaseQRankSum=3.722;DP=414;FS=2.539;HRun=2;HaplotypeScore=120.8763;InbreedingCoeff=0.4524;MQ=39.90;MQ0=10;MQRankSum=-3.805;QD=3.26;ReadPosRankSum=2.864;VQSLOD=0.6118;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,2:17:64.24:88,0,64	0/0:8,0:7:18.06:0,18,261	0/0:36,0:15:29.58:0,30,401	0/0:26,0:13:37.60:0,38,464	0/0:27,0:27:81.27:0,81,1149	1/1:15,0:15:8.58:45,9,0	0/1:14,0:10:1.90:45,0,2	0/0:25,0:21:39.12:0,39,523	0/0:18,0:18:23.87:0,24,540	0/0:22,0:21:45.94:0,46,777	0/0:22,0:22:50.97:0,51,707	1/1:8,0:8:5.59:26,6,0	1/1:12,0:12:5.42:24,5,0	1/1:8,0:3:8.22:42,8,0	0/0:18,0:18:39.10:0,39,538	0/0:12,0:12:30.09:0,30,423	1/1:8,0:7:14.46:67,14,0	0/0:13,0:12:27:0,27,337	0/1:11,0:8:7.24:7,0,52	1/1:9,0:9:2.60:10,3,0	0/1:8,1:9:2.70:89,0,3	1/1:4,0:2:5.64:28,6,0	0/1:7,0:7:16.07:25,0,16	0/1:9,1:8:14.34:44,0,14	0/0:18,0:16:39.04:0,39,515	0/1:12,0:12:54.02:54,0,81	1/1:11,0:11:21.14:105,21,0	0/0:12,0:12:36.12:0,36,519
chr10	93650941	.	G	GAA	315.94	PASS	AB=0.886;AC=10;AF=0.179;AN=56;BaseQRankSum=1.227;DP=403;FS=3.389;HRun=3;HaplotypeScore=127.8635;InbreedingCoeff=0.1300;MQ=40.56;MQ0=10;MQRankSum=-3.240;QD=4.51;ReadPosRankSum=0.347;VQSLOD=-0.0655;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,3:16:35.94:0,36,382	0/0:8,0:7:18.06:0,18,294	0/0:36,0:15:29:0,29,457	0/0:26,0:14:37.62:0,38,523	0/0:27,0:27:81.27:0,81,1274	0/0:15,0:15:5.12:0,5,20	0/1:8,4:10:92.57:152,0,93	0/0:25,0:21:38.88:0,39,619	0/0:18,0:18:41.17:0,41,635	0/0:22,0:21:59.23:0,59,910	0/0:22,0:22:51.17:0,51,809	0/0:8,0:8:3.27:0,3,13	0/0:12,0:12:5.22:0,5,26	0/1:2,3:3:8.13:51,0,8	0/0:18,0:18:39.11:0,39,593	0/0:12,0:12:30.10:0,30,481	0/0:8,0:7:14.92:0,15,167	0/0:14,0:13:17.09:0,17,356	0/0:7,0:5:12.35:0,12,88	1/1:8,0:8:3.01:57,3,0	0/1:8,1:9:51.60:52,0,87	1/1:2,1:2:4.07:12,4,0	0/0:8,0:8:7.75:0,8,59	0/1:9,0:8:8.81:9,0,35	0/0:17,0:16:39.11:0,39,591	0/1:12,0:12:63.73:64,0,206	0/1:11,0:11:33.70:57,0,34	0/0:12,0:12:36.12:0,36,571
chr10	93651074	.	AG	A	1552.72	PASS	AB=0.746;AC=21;AF=0.375;AN=56;BaseQRankSum=5.520;DP=418;FS=10.631;HRun=2;HaplotypeScore=111.0769;InbreedingCoeff=-0.3832;MQ=46.95;MQ0=13;MQRankSum=3.130;QD=5.09;ReadPosRankSum=5.649;VQSLOD=-0.2047;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,2:17:1.60:2,0,125	0/1:2,4:6:0.43:40,0,0	0/0:14,0:5:12.04:0,12,175	0/0:13,0:4:9.03:0,9,110	0/1:14,9:23:22.45:168,0,22	0/1:9,1:10:29.16:29,0,65	0/0:12,0:10:17.56:0,18,141	0/0:26,0:16:22.48:0,22,138	0/1:12,7:19:46.29:176,0,46	0/1:8,8:14:20.46:109,0,20	0/1:9,9:18:96.57:97,0,109	0/1:10,2:11:15.94:16,0,92	0/0:9,1:10:6.84:0,7,126	0/1:3,8:11:22.05:67,0,22	0/1:10,9:19:49.91:155,0,50	0/1:11,14:25:38.84:229,0,39	0/1:18,3:21:0.73:1,0,185	0/1:11,10:20:54.10:218,0,54	0/1:9,1:8:25.78:26,0,114	0/1:9,3:12:43.04:43,0,96	0/1:10,4:14:25.44:25,0,196	0/1:5,4:9:7.64:8,0,51	0/0:8,5:13:16.58:0,17,73	0/0:19,1:20:24.76:0,25,281	1/1:10,4:14:16.93:167,17,0	0/1:7,4:11:42.08:85,0,42	0/1:10,5:15:49.20:49,0,57	0/0:5,0:5:2.79:0,3,30
chr10	93651077	.	AAGG	A	3233.06	PASS	AB=0.791;AC=26;AF=0.464;AN=56;BaseQRankSum=5.545;DP=417;FS=16.292;HRun=0;HaplotypeScore=122.2697;InbreedingCoeff=-0.3295;MQ=47.34;MQ0=11;MQRankSum=3.136;QD=9.71;ReadPosRankSum=6.748;VQSLOD=1.8140;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:17:5.90:6,0,105	1/1:2,4:6:6.41:109,6,0	0/0:15,0:6:12.04:0,12,160	0/0:13,0:4:9.03:0,9,110	1/1:14,9:23:21.87:418,22,0	0/1:9,0:10:38.98:39,0,42	0/0:13,0:12:7.29:0,7,97	0/1:25,0:16:48.93:49,0,58	0/1:12,7:19:19.32:325,0,19	1/1:8,8:14:4.08:232,4,0	0/1:10,9:19:76.91:239,0,77	0/1:9,0:10:19.59:20,0,62	0/0:9,0:10:7.51:0,8,108	0/1:3,0:11:7.23:97,0,7	0/1:10,9:19:26.58:260,0,27	0/1:12,14:26:13:480,0,13	0/1:17,0:20:12.09:12,0,182	0/1:9,10:18:92.48:359,0,92	0/1:9,1:9:53.14:53,0,80	0/1:8,3:11:87.80:108,0,88	0/1:10,4:14:62.21:62,0,137	0/1:8,0:12:29.66:34,0,30	0/0:7,0:12:10.73:0,11,39	0/0:20,0:21:15.82:0,16,234	1/1:9,4:13:21.21:245,21,0	0/1:6,4:10:23.30:137,0,23	0/1:10,5:15:43.81:104,0,44	0/1:5,0:5:13.51:14,0,63
chr10	93651547	.	G	GGT	5091.46	PASS	AB=0.975;AC=43;AF=0.768;AN=56;BaseQRankSum=-3.247;DP=600;FS=0.000;HRun=0;HaplotypeScore=149.2664;InbreedingCoeff=0.4411;MQ=62.10;MQ0=27;MQRankSum=-0.572;QD=11.60;ReadPosRankSum=3.142;VQSLOD=4.7566;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:20:8.57:9,0,13	1/1:11,0:10:21.05:299,21,0	0/0:57,0:19:22.69:0,23,209	0/0:52,0:29:38.82:0,39,346	1/1:28,0:28:40.16:906,40,0	1/1:26,0:24:0.74:10,1,0	1/1:29,0:27:14.48:57,14,0	1/1:26,0:26:51.16:753,51,0	1/1:21,0:20:5.89:479,6,0	1/1:9,10:17:36.12:522,36,0	1/1:23,0:23:42.13:584,42,0	0/1:15,0:15:0.16:0,0,0	1/1:17,0:16:5.18:22,5,0	1/1:13,0:13:1.81:5,2,0	1/1:16,0:15:6.01:64,6,0	1/1:21,0:20:42.12:605,42,0	1/1:16,0:15:2.63:8,3,0	1/1:5,7:11:6.02:69,6,0	1/1:21,0:19:12.13:58,12,0	1/1:7,0:7:0.47:1,0,0	0/0:27,0:22:2.99:0,3,27	0/1:17,0:17:0.01:0,0,0	0/1:11,0:11:0:0,0,0	0/0:25,0:24:0.02:0,0,0	1/1:22,0:21:36.12:532,36,0	1/1:19,0:16:1.14:4,1,0	1/1:17,0:17:6.49:26,6,0	0/1:6,1:7:26.80:77,0,27
chr10	93651549	.	T	TGT	5178.44	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=-2.792;DP=608;FS=1.650;HRun=0;HaplotypeScore=152.0144;InbreedingCoeff=0.4459;MQ=57.10;MQ0=30;MQRankSum=-0.809;QD=11.51;ReadPosRankSum=2.695;VQSLOD=4.3288;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:20:8.49:8,0,19	1/1:10,0:9:21.05:299,21,0	0/0:54,0:16:22.69:0,23,209	0/0:50,0:27:38.82:0,39,346	1/1:29,0:29:40.16:906,40,0	1/1:27,0:24:4.38:16,4,0	1/1:30,0:28:14.38:56,14,0	1/1:29,0:28:51.16:753,51,0	1/1:22,0:21:8.87:511,9,0	1/1:21,0:18:39.12:548,39,0	1/1:25,0:24:45.14:615,45,0	1/1:16,0:16:1.66:5,2,0	1/1:16,0:15:5.18:22,5,0	1/1:12,0:12:1.81:5,2,0	1/1:8,8:16:6.01:64,6,0	1/1:20,0:19:42.12:605,42,0	1/1:16,0:15:2.63:8,3,0	1/1:13,0:11:6.02:69,6,0	1/1:21,0:19:11.75:47,12,0	1/1:7,0:7:0.47:1,0,0	0/0:28,0:23:2.66:0,3,26	0/1:18,0:18:0.01:0,0,0	0/1:12,0:12:0:0,0,0	0/0:26,0:25:0.02:0,0,0	1/1:23,0:22:36.12:532,36,0	1/1:20,0:17:1.14:4,1,0	1/1:16,0:16:6.39:26,6,0	0/1:7,0:7:26.80:77,0,27
chr10	93651555	.	T	TG	1485.26	PASS	AB=0.951;AC=13;AF=0.232;AN=56;BaseQRankSum=3.482;DP=635;FS=3.332;HRun=1;HaplotypeScore=157.2948;InbreedingCoeff=0.4619;MQ=48.37;MQ0=38;MQRankSum=-5.418;QD=9.00;ReadPosRankSum=-0.646;VQSLOD=0.9580;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:24:25.57:0,26,241	0/0:11,0:9:8.56:0,9,36	0/0:50,0:12:36.11:0,36,456	0/0:47,0:24:66.06:0,66,808	0/0:30,0:30:42.63:0,43,258	0/1:25,4:26:65.28:347,0,65	0/1:28,2:27:19.08:291,0,19	0/0:33,0:31:64.10:0,64,636	0/0:20,0:19:34.72:0,35,250	0/0:24,0:21:41.98:0,42,361	0/0:25,0:22:42.79:0,43,309	0/1:15,1:15:0.55:254,0,1	1/1:11,5:15:28.83:354,29,0	1/1:12,1:14:5.73:107,6,0	0/0:16,0:15:8.81:0,9,71	0/0:21,0:20:23.64:0,24,143	0/0:20,0:19:7.51:0,8,64	0/0:13,0:11:11.52:0,12,104	0/1:20,0:17:14.45:14,0,175	0/1:7,0:7:4.07:17,0,4	0/0:34,0:28:13.34:0,13,109	1/1:17,4:20:20.96:223,21,0	1/1:12,0:11:3.01:41,3,0	0/0:25,3:27:1.17:0,1,5	0/0:23,0:22:20.71:0,21,107	0/0:25,0:22:25.51:0,26,244	0/0:15,0:15:7.33:0,7,142	0/0:8,0:8:21.37:0,21,219
chr10	93651556	.	GT	G	1316.52	PASS	AB=0.728;AC=12;AF=0.214;AN=56;BaseQRankSum=4.425;DP=643;FS=0.000;HRun=1;HaplotypeScore=148.9635;InbreedingCoeff=0.4696;MQ=48.02;MQ0=42;MQRankSum=-6.376;QD=7.79;ReadPosRankSum=-0.010;VQSLOD=0.4700;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:23:29.28:0,29,244	0/0:12,0:10:24.04:0,24,251	0/0:50,0:12:36.11:0,36,526	0/0:47,0:24:66.12:0,66,941	0/0:30,0:30:78.13:0,78,828	0/1:17,12:26:72:301,0,72	0/1:23,9:28:54.02:291,0,54	0/0:33,0:31:93.21:0,93,1119	0/0:20,0:19:51.10:0,51,591	0/0:24,0:21:63.13:0,63,738	0/0:25,0:22:63.13:0,63,696	0/1:8,7:15:12.47:229,0,12	1/1:10,5:15:15.29:283,15,0	1/1:9,3:15:2.61:100,3,0	0/0:16,0:15:9.03:0,9,126	0/0:20,0:19:48.08:0,48,495	0/0:19,0:19:0.25:0,0,35	0/0:13,0:10:12.04:0,12,152	0/0:20,1:18:13.88:0,14,250	0/0:7,0:7:2.50:0,2,10	0/0:35,1:29:13.69:0,14,119	1/1:15,6:21:20.96:222,21,0	1/1:6,6:11:3.01:42,3,0	0/1:16,9:26:0.56:1,0,1	0/0:24,0:23:45.06:0,45,448	0/0:26,0:22:23.61:0,24,304	0/0:15,0:15:12.41:0,12,145	0/0:9,0:8:24.06:0,24,299
chr10	93651557	.	T	TG	1254.79	PASS	AB=0.915;AC=17;AF=0.304;AN=56;BaseQRankSum=2.064;DP=638;FS=2.590;HRun=1;HaplotypeScore=157.1724;InbreedingCoeff=-0.0062;MQ=46.75;MQ0=44;MQRankSum=-5.823;QD=4.31;ReadPosRankSum=0.033;VQSLOD=0.2279;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,5:23:63.51:98,0,64	0/0:12,0:10:11.26:0,11,74	0/0:49,0:11:31.63:0,32,362	0/0:46,0:23:60.15:0,60,753	0/0:30,0:29:39.62:0,40,220	0/1:28,0:25:14.17:14,0,61	0/1:30,0:26:20.77:21,0,46	0/0:33,0:31:64.13:0,64,634	0/0:20,0:19:34.71:0,35,237	0/0:25,0:21:42.72:0,43,370	0/0:23,0:20:36.78:0,37,244	0/1:15,0:14:19.06:41,0,19	1/1:16,0:15:0.85:44,1,0	0/1:16,0:16:1.29:18,0,1	0/0:17,0:16:8.81:0,9,71	0/0:20,0:19:23.64:0,24,143	0/1:14,5:19:36.88:283,0,37	0/0:13,0:10:11.52:0,12,103	0/1:18,4:19:99:423,0,105	0/1:6,0:6:4.07:15,0,4	0/1:28,7:28:62.04:85,0,62	1/1:24,0:23:4.63:12,5,0	1/1:12,0:11:0.47:3,0,0	0/0:27,0:26:1.17:0,1,5	0/0:23,0:22:20.72:0,21,116	0/1:22,4:22:99:246,0,179	0/1:13,2:15:76.06:104,0,76	0/0:9,0:8:18.42:0,18,191
chr10	93651564	.	GT	G	3094.64	PASS	AB=0.814;AC=38;AF=0.679;AN=56;BaseQRankSum=4.428;DP=619;FS=0.497;HRun=2;HaplotypeScore=140.7739;InbreedingCoeff=0.1757;MQ=43.54;MQ0=45;MQRankSum=1.997;QD=6.80;ReadPosRankSum=4.900;VQSLOD=0.9217;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,11:24:36.15:72,0,36	1/1:10,2:10:16.99:62,17,0	0/0:48,0:10:30.03:0,30,327	0/0:42,0:19:42.09:0,42,452	1/1:26,3:28:26.93:144,27,0	1/1:15,14:26:27.37:287,27,0	1/1:20,9:25:14.51:199,15,0	0/1:30,0:28:45.22:45,0,343	0/1:15,4:18:6.10:173,0,6	0/1:21,3:20:64.66:147,0,65	1/1:20,1:18:25.14:212,25,0	1/1:6,11:16:19.80:206,20,0	1/1:10,4:14:25.06:267,25,0	1/1:11,5:16:0.72:72,1,0	1/1:14,3:16:6.44:74,6,0	1/1:16,2:17:27.73:142,28,0	1/1:11,7:18:3.02:232,3,0	1/1:10,3:10:7.63:114,8,0	0/1:19,6:21:99:200,0,148	0/1:3,3:6:2.70:15,0,3	0/0:22,11:26:5.99:0,6,62	1/1:12,11:22:0.49:35,0,0	0/0:7,5:10:0.13:0,0,1	0/0:19,10:27:4.10:0,4,12	1/1:15,5:19:30.25:163,30,0	0/1:16,8:21:99:206,0,154	1/1:10,6:16:6.94:179,7,0	0/1:5,1:5:11.67:12,0,31
chr10	93651565	.	T	TG	3000.88	PASS	AB=0.957;AC=38;AF=0.679;AN=56;BaseQRankSum=4.974;DP=621;FS=0.000;HRun=1;HaplotypeScore=146.3109;InbreedingCoeff=0.1903;MQ=43.10;MQ0=48;MQRankSum=1.933;QD=6.54;ReadPosRankSum=4.690;VQSLOD=0.5981;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,4:25:36.77:72,0,37	1/1:12,0:10:16.37:48,16,0	0/0:48,0:10:30.03:0,30,327	0/0:40,0:18:42.09:0,42,452	1/1:28,0:28:13.72:103,14,0	1/1:21,7:25:27.38:308,27,0	1/1:20,9:25:13.28:217,13,0	0/1:31,0:29:80.22:80,0,339	0/1:19,0:18:6.40:132,0,6	0/1:25,0:21:64.21:133,0,64	1/1:20,0:17:25.12:198,25,0	1/1:16,1:15:19.80:206,20,0	1/1:10,6:16:25.35:270,25,0	1/1:9,6:16:0.89:73,1,0	1/1:16,0:14:6.39:46,6,0	1/1:17,0:17:27.79:128,28,0	1/1:16,4:19:7.57:247,8,0	1/1:12,1:10:7.60:100,8,0	0/1:20,4:20:99:219,0,149	0/1:6,0:6:2.53:15,0,3	0/0:30,3:26:5.62:0,6,59	1/1:20,3:23:1.19:36,1,0	0/0:12,0:10:0.37:0,0,1	0/0:23,6:27:3.61:0,4,11	1/1:20,0:19:29.03:134,29,0	0/1:22,2:21:99:200,0,153	1/1:14,3:16:12.90:189,13,0	0/1:6,0:5:11.42:11,0,31
chr10	93651568	.	TG	T	872.64	PASS	AB=0.967;AC=18;AF=0.321;AN=56;BaseQRankSum=-0.675;DP=620;FS=4.335;HRun=1;HaplotypeScore=143.3274;InbreedingCoeff=0.4487;MQ=40.75;MQ0=48;MQRankSum=7.920;QD=3.93;ReadPosRankSum=2.497;VQSLOD=0.6882;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:25:11.39:0,11,95	1/1:11,1:10:17.88:71,18,0	0/0:46,0:8:24.02:0,24,277	0/0:35,0:13:30.10:0,30,375	1/1:25,3:27:39.03:182,39,0	0/0:27,0:24:19.71:0,20,141	0/0:31,0:27:12.33:0,12,106	0/1:30,0:28:21.75:22,0,359	0/1:19,1:20:7.57:107,0,8	0/1:25,1:22:69.39:109,0,69	1/1:19,1:17:19.57:150,20,0	0/0:17,0:15:20.02:0,20,123	0/0:16,0:16:20.14:0,20,132	0/1:16,0:16:0.22:0,0,1	1/1:13,2:13:8.14:102,8,0	1/1:15,1:15:24.19:100,24,0	0/0:21,0:20:30.07:0,30,206	0/1:11,1:9:30.01:30,0,30	0/0:25,0:21:47:0,47,422	0/0:6,0:6:3.35:0,3,16	0/0:34,0:27:5.05:0,5,53	0/0:25,0:24:5.94:0,6,36	0/0:13,0:11:2.35:0,2,27	0/0:33,0:31:2.97:0,3,27	1/1:17,2:19:30.31:170,30,0	0/0:24,0:21:49.75:0,50,509	0/0:16,0:15:9.43:0,9,81	0/1:6,0:5:11.95:12,0,29
chr10	93651577	.	G	GTGTGT	532.80	PASS	AB=0.929;AC=7;AF=0.130;AN=54;BaseQRankSum=0.579;DP=577;FS=0.812;HRun=0;HaplotypeScore=158.0378;InbreedingCoeff=0.0997;MQ=39.95;MQ0=47;MQRankSum=-2.658;QD=4.63;ReadPosRankSum=-3.736;VQSLOD=1.7654;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:26:11.67:0,12,179	0/0:9,0:7:15.05:0,15,196	./.	0/0:23,0:6:9.01:0,9,99	0/0:27,0:26:65.91:0,66,851	0/0:26,0:23:19.02:0,19,244	0/0:32,0:28:15.71:0,16,282	0/0:27,0:24:61.59:0,62,728	0/0:20,0:19:36.28:0,36,520	0/0:23,0:19:49.40:0,49,591	0/0:19,0:16:42.06:0,42,510	0/1:16,0:14:46.30:46,0,193	0/0:17,0:17:35.67:0,36,362	0/0:15,0:17:5.61:0,6,108	0/0:18,0:16:26.88:0,27,328	0/0:17,0:16:42.13:0,42,537	0/0:20,0:20:22.12:0,22,275	0/0:13,0:11:15.05:0,15,196	0/1:24,0:21:99:137,0,444	1/1:8,0:8:7.79:84,8,0	0/0:29,0:23:5.68:0,6,74	0/0:23,0:23:15:0,15,181	0/0:13,0:11:3.46:0,3,25	0/1:30,0:28:2.73:3,0,58	0/0:21,0:20:39.11:0,39,486	0/1:22,0:20:99:216,0,320	0/1:7,5:12:66.46:170,0,66	0/0:6,0:5:15.05:0,15,201
chr10	93652099	.	G	GA	8356.16	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-13.286;DP=514;FS=3.007;HRun=7;HaplotypeScore=46.9321;InbreedingCoeff=0.9691;MQ=68.28;MQ0=1;MQRankSum=1.373;QD=28.62;ReadPosRankSum=3.974;VQSLOD=5.3005;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,34:39:87.39:1083,87,0	0/0:5,0:5:15.02:0,15,145	0/0:8,0:8:8.73:0,9,74	0/0:9,0:8:11:0,11,76	0/0:32,0:32:87.14:0,87,839	1/1:1,20:21:60.18:725,60,0	1/1:2,11:13:29.76:337,30,0	0/0:33,0:32:90.13:0,90,864	0/0:19,0:19:57.08:0,57,545	0/0:19,0:19:54.09:0,54,522	0/0:23,0:23:57.07:0,57,545	1/1:3,14:17:36.11:434,36,0	1/1:0,12:12:36.11:435,36,0	1/1:4,16:20:45.14:543,45,0	0/0:13,0:13:36.03:0,36,340	0/0:12,0:12:36.05:0,36,342	1/1:4,18:22:45.14:544,45,0	0/0:15,0:15:42.07:0,42,406	1/1:2,22:24:66.19:786,66,0	1/1:3,14:17:42.09:487,42,0	1/1:2,15:17:36.11:435,36,0	1/1:2,3:5:6.02:72,6,0	1/1:0,10:10:24.07:290,24,0	1/1:0,16:16:39.12:471,39,0	0/0:16,0:16:48.08:0,48,464	1/1:4,29:33:29.30:920,29,0	1/1:2,23:25:66.20:794,66,0	0/0:18,0:18:48.07:0,48,463
chr10	93652623	.	TA	T	803.03	PASS	AB=0.950;AC=18;AF=0.321;AN=56;BaseQRankSum=3.969;DP=265;FS=4.916;HRun=1;HaplotypeScore=68.7450;InbreedingCoeff=0.6938;MQ=63.35;MQ0=14;MQRankSum=-2.752;QD=9.23;ReadPosRankSum=0.019;VQSLOD=1.0569;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:60.14:0,60,660	0/0:4,0:4:11.64:0,12,93	0/0:6,0:6:9.85:0,10,93	0/0:3,0:3:9.02:0,9,108	0/0:16,0:16:35.52:0,36,268	1/1:2,9:11:26.48:210,26,0	1/1:3,4:7:11.97:107,12,0	0/0:18,0:18:43.91:0,44,498	0/0:7,0:6:17.38:0,17,100	0/0:5,0:5:10.16:0,10,80	0/1:8,1:9:17.47:17,0,126	1/1:4,6:9:21.69:152,22,0	1/1:3,2:6:11.23:57,11,0	1/1:3,4:7:9.14:105,9,0	0/0:9,0:9:2.58:0,3,55	0/0:1,0:1:3:0,3,26	0/0:27,0:24:66.12:0,66,666	0/0:4,0:4:5.85:0,6,38	0/0:9,0:6:18.05:0,18,261	0/0:8,0:8:22.32:0,22,312	0/0:5,0:5:7.79:0,8,99	1/1:0,1:1:3:26,3,0	1/1:2,2:5:11.61:76,12,0	1/1:5,8:12:30.33:239,30,0	0/1:15,0:14:2.06:2,0,191	0/0:20,0:19:48.01:0,48,620	0/0:11,0:11:29.77:0,30,413	0/0:4,0:4:8.98:0,9,103
chr10	93652624	.	A	AT	1007.15	PASS	AB=0.804;AC=30;AF=0.556;AN=54;BaseQRankSum=3.292;DP=258;FS=4.769;HRun=1;HaplotypeScore=69.5312;InbreedingCoeff=0.5618;MQ=61.15;MQ0=15;MQRankSum=-1.215;QD=7.52;ReadPosRankSum=-0.529;VQSLOD=0.4931;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:54.17:0,54,668	0/1:3,1:4:4.51:30,0,5	0/0:4,0:4:7.75:0,8,60	0/0:3,0:3:8.92:0,9,87	0/1:6,9:16:1.53:183,0,2	1/1:12,0:10:7.58:35,8,0	1/1:7,0:7:4.90:17,5,0	0/0:18,0:18:40.18:0,40,286	1/1:2,5:6:12.91:160,13,0	1/1:2,3:5:10.98:103,11,0	1/1:3,4:7:2.03:121,2,0	1/1:10,0:9:2.40:20,2,0	0/1:6,0:6:0.78:2,0,1	1/1:8,0:7:3.07:16,3,0	1/1:4,5:9:13.09:132,13,0	./.	0/0:26,0:23:63.17:0,63,751	1/1:1,4:4:6.02:66,6,0	0/0:9,0:6:13.50:0,13,62	0/0:8,0:8:11.71:0,12,79	0/0:4,0:4:7:0,7,28	1/1:1,0:1:2.50:9,2,0	1/1:6,0:5:0.79:8,1,0	1/1:12,0:11:17.85:61,18,0	1/1:6,9:14:5.89:196,6,0	0/0:20,0:19:38.60:0,39,163	0/0:11,0:11:20.45:0,20,97	0/1:3,1:4:7:27,0,7
chr10	93652625	.	TA	T	1619.17	PASS	AB=0.951;AC=40;AF=0.741;AN=54;BaseQRankSum=5.503;DP=251;FS=5.098;HRun=1;HaplotypeScore=66.0971;InbreedingCoeff=0.1836;MQ=61.25;MQ0=15;MQRankSum=-3.822;QD=8.02;ReadPosRankSum=-2.991;VQSLOD=-0.1899;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:42.18:0,42,212	1/1:4,0:4:1.40:25,1,0	0/0:4,0:4:0.41:0,0,80	0/1:3,0:3:2.26:2,0,72	1/1:16,0:16:18.41:117,18,0	1/1:5,7:11:26.72:213,27,0	1/1:4,3:7:11.97:107,12,0	0/1:16,1:17:21.23:21,0,220	1/1:6,1:6:15.27:85,15,0	1/1:5,0:5:13.60:70,14,0	1/1:7,0:7:11.44:88,11,0	1/1:3,5:8:19.69:138,20,0	1/1:3,2:5:10.02:57,10,0	1/1:5,3:7:14.65:120,15,0	1/1:9,0:9:19.07:108,19,0	./.	0/0:26,0:23:26.60:0,27,110	1/1:5,0:4:5.17:20,5,0	0/1:9,0:6:14.49:14,0,21	0/1:8,0:8:18.97:19,0,31	0/1:3,1:4:5.17:31,0,5	1/1:0,1:1:3:26,3,0	1/1:4,2:5:11.77:80,12,0	1/1:4,8:11:27.36:216,27,0	1/1:15,0:14:15.84:113,16,0	0/1:18,1:18:29.58:75,0,30	0/1:10,1:11:22.54:23,0,33	0/1:3,0:3:1.92:9,0,2
chr10	93652627	.	TA	T	3552.20	PASS	AB=1.000;AC=45;AF=0.833;AN=54;BaseQRankSum=-0.433;DP=249;FS=1.358;HRun=1;HaplotypeScore=58.4923;InbreedingCoeff=0.1116;MQ=61.05;MQ0=16;MQRankSum=-2.775;QD=14.44;ReadPosRankSum=-1.611;VQSLOD=2.4652;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:18:34.94:648,35,0	1/1:4,0:4:3.11:29,3,0	0/1:4,0:4:10.79:11,0,34	0/0:3,0:3:6.38:0,6,51	1/1:15,0:15:21.22:131,21,0	1/1:12,0:10:27.20:214,27,0	1/1:7,0:7:11.97:107,12,0	1/1:17,0:17:31.35:218,31,0	1/1:7,0:6:15.65:90,16,0	1/1:5,0:5:11.44:68,11,0	1/1:7,0:7:11.71:90,12,0	1/1:9,0:8:20.80:150,21,0	1/1:4,0:4:8.77:54,9,0	1/1:8,0:7:14.66:122,15,0	1/1:9,0:9:22.40:131,22,0	./.	1/1:3,23:23:60.20:830,60,0	1/1:5,0:4:5.34:23,5,0	0/1:9,0:6:13.62:16,0,14	0/1:8,0:8:2.92:3,0,24	0/1:4,0:4:2.91:32,0,3	1/1:1,0:1:3:26,3,0	1/1:5,0:4:11.73:80,12,0	1/1:13,0:12:27.35:216,27,0	1/1:15,0:14:18.14:122,18,0	0/1:19,0:18:6.64:106,0,7	0/1:11,0:11:23.83:24,0,24	0/1:3,0:2:0.85:10,0,1
chr10	93652733	.	A	ATTTT	5389.81	PASS	AB=0.970;AC=43;AF=0.796;AN=54;BaseQRankSum=-2.442;DP=331;FS=5.177;HRun=1;HaplotypeScore=89.6196;InbreedingCoeff=0.4730;MQ=58.59;MQ0=6;MQRankSum=-3.524;QD=23.33;ReadPosRankSum=-0.706;VQSLOD=1.4666;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:29.57:232,30,0	1/1:3,0:3:9.03:154,9,0	0/0:53,0:17:27.04:0,27,499	0/1:49,0:12:9.35:9,0,239	1/1:14,1:15:29.61:456,30,0	1/1:8,0:13:30.10:577,30,0	1/1:2,0:3:6.02:113,6,0	1/1:16,4:20:40.75:714,41,0	1/1:4,0:4:5.55:63,6,0	1/1:7,3:10:20.22:363,20,0	1/1:10,5:15:36.03:684,36,0	1/1:4,0:5:15.02:235,15,0	1/1:4,0:4:9.03:150,9,0	1/1:1,0:6:6.02:115,6,0	1/1:5,0:5:9.03:154,9,0	1/1:5,1:6:15.01:287,15,0	0/0:27,0:27:44.33:0,44,160	1/1:6,0:6:12.04:232,12,0	1/1:12,0:12:3.17:54,3,0	0/1:9,0:10:19.35:19,0,42	0/0:4,0:3:0.41:0,0,8	0/1:1,0:1:0:0,0,0	1/1:4,0:3:3.48:50,3,0	./.	1/1:6,3:9:20.89:495,21,0	1/1:10,0:11:12.48:68,12,0	0/0:13,0:13:2.23:0,2,99	1/1:3,1:4:9.03:164,9,0
chr10	93652734	.	TA	T	1180.57	PASS	AB=0.991;AC=39;AF=0.722;AN=54;BaseQRankSum=-2.331;DP=329;FS=2.125;HRun=1;HaplotypeScore=87.3546;InbreedingCoeff=0.2255;MQ=58.63;MQ0=6;MQRankSum=1.992;QD=5.29;ReadPosRankSum=0.661;VQSLOD=0.5921;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,6:13:28.75:145,29,0	0/1:3,0:3:3.61:4,0,7	0/0:55,0:17:27.68:0,28,345	0/0:49,0:12:13.85:0,14,124	0/1:16,0:15:9.78:20,0,10	1/1:9,5:13:25.18:105,25,0	1/1:1,2:3:5.25:23,5,0	0/1:17,2:19:0.50:65,0,0	0/1:4,0:4:2.28:5,0,2	1/1:10,1:10:6.07:36,6,0	1/1:15,1:15:28.44:133,28,0	1/1:2,3:5:10.88:50,11,0	1/1:1,3:4:8.49:42,8,0	1/1:3,0:3:5.10:22,5,0	0/1:5,0:5:1.34:1,0,7	1/1:5,0:5:6.32:47,6,0	1/1:12,16:28:55.85:286,56,0	0/1:6,0:6:1.08:11,0,1	1/1:10,2:12:17.61:83,18,0	0/1:10,0:10:0.85:30,0,1	1/1:4,0:3:1.19:16,1,0	0/1:1,0:1:0:0,0,0	1/1:1,1:2:3.37:17,3,0	./.	0/1:9,0:9:5.28:25,0,5	1/1:10,1:11:21.82:105,22,0	0/1:15,0:14:20.07:46,0,20	0/1:4,0:4:1.58:2,0,5
chr10	93653508	.	GCA	G	548.11	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.086;DP=850;FS=5.328;HRun=0;HaplotypeScore=108.0967;InbreedingCoeff=0.9999;MQ=80.96;MQ0=0;MQRankSum=0.058;QD=39.15;ReadPosRankSum=0.551;VQSLOD=5.5632;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,144,2733	0/0:14,0:14:39.11:0,39,718	0/0:31,0:31:81.27:0,81,1437	0/0:30,0:29:80.99:0,81,1434	0/0:27,0:27:81.28:0,81,1546	0/0:21,0:21:63.22:0,63,1216	0/0:34,0:34:96.33:0,96,1854	0/0:26,0:26:78.24:0,78,1385	0/0:22,0:22:63.22:0,63,1213	0/0:32,0:32:96.33:0,96,1824	0/0:24,0:24:72.23:0,72,1345	0/0:50,0:50:99:0,151,2845	0/0:22,0:22:57.20:0,57,1094	0/0:41,0:41:99:0,114,2179	0/0:46,0:45:99:0,132,2506	0/0:30,0:30:84.29:0,84,1613	0/0:48,0:48:99:0,144,2711	0/0:26,0:26:69.24:0,69,1329	0/0:16,0:16:48.11:0,48,857	0/0:28,0:28:84.29:0,84,1613	0/0:50,0:50:99:0,138,2650	0/0:27,0:27:81.26:0,81,1518	0/0:21,0:21:63.22:0,63,1196	0/0:35,0:34:93.32:0,93,1780	1/1:0,14:14:42.14:643,42,0	0/0:40,0:39:99:0,117,2199	0/0:29,0:28:84.27:0,84,1578	0/0:14,0:14:42.10:0,42,757
chr10	93653586	.	T	TTG	4806.97	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-1.711;DP=677;FS=0.839;HRun=0;HaplotypeScore=193.5189;InbreedingCoeff=0.7141;MQ=57.07;MQ0=3;MQRankSum=-1.387;QD=15.61;ReadPosRankSum=1.742;VQSLOD=4.4142;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:40:4.25:0,4,38	0/0:9,0:9:20.99:0,21,217	0/0:28,0:24:53.69:0,54,586	0/0:31,0:22:39.12:0,39,475	0/0:20,0:20:33.01:0,33,373	1/1:9,6:15:18.33:294,18,0	1/1:8,12:20:39.13:632,39,0	0/0:33,0:32:51.21:0,51,714	0/0:27,0:29:68.11:0,68,694	0/0:26,0:26:66.15:0,66,784	0/0:17,0:17:25.49:0,25,299	1/1:21,15:35:63.17:1064,63,0	0/1:24,0:23:9.25:46,0,9	1/1:28,0:28:7.97:47,8,0	0/0:41,0:41:87.21:0,87,1033	0/0:18,0:18:42.50:0,42,482	0/0:20,0:20:0.67:0,1,60	0/0:21,0:20:41.63:0,42,449	1/1:10,0:12:20.17:189,20,0	0/1:20,0:20:27.58:82,0,28	1/1:28,0:41:44.08:382,44,0	1/1:6,7:12:24.97:393,25,0	1/1:1,8:9:27.09:432,27,0	1/1:13,22:33:56.78:874,57,0	0/0:18,0:18:39.10:0,39,466	1/1:28,0:28:13.42:324,13,0	0/1:25,0:24:48.96:49,0,59	0/0:15,0:15:11.93:0,12,107
chr10	93653592	.	GTGTGTGTGTATGTTGTGTGAT	G	14833.40	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=5.508;DP=649;FS=2.874;HRun=0;HaplotypeScore=328.8124;InbreedingCoeff=0.1004;MQ=50.72;MQ0=6;MQRankSum=-5.517;QD=29.09;ReadPosRankSum=2.919;VQSLOD=2.7649;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:8.45:0,8,286	0/1:9,0:9:89.47:516,0,89	0/0:37,0:22:54.97:0,55,625	0/0:34,0:18:39.12:0,39,475	0/1:17,0:17:99:155,0,318	1/1:11,2:13:24.08:612,24,0	1/1:15,0:15:39.13:657,39,0	0/0:29,0:28:40.07:0,40,599	0/1:27,0:27:99:1502,0,346	0/1:24,0:24:99:698,0,372	0/1:14,0:14:99:597,0,118	1/1:25,6:30:79.82:2065,80,0	1/1:3,19:22:9.03:363,9,0	1/1:3,27:30:12.04:673,12,0	0/1:35,0:35:99:438,0,691	0/1:17,0:17:99:790,0,287	0/1:19,0:19:55.30:55,0,493	0/1:19,0:18:24.41:24,0,302	1/1:14,0:13:18.02:227,18,0	1/1:21,0:21:24.04:393,24,0	1/1:40,0:39:46.73:427,47,0	1/1:10,1:10:27.09:551,27,0	1/1:8,1:9:27.09:549,27,0	1/1:31,3:33:69.14:1307,69,0	0/1:17,0:17:99:256,0,293	1/1:25,0:25:54.05:796,54,0	1/1:30,0:29:28.80:655,29,0	0/1:15,0:15:21.88:529,0,22
chr10	93653596	.	GTGTGTATGTTGTGTGAT	G	13291.22	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=8.720;DP=648;FS=8.400;HRun=0;HaplotypeScore=291.6610;InbreedingCoeff=-0.1015;MQ=48.91;MQ0=8;MQRankSum=-11.171;QD=24.43;ReadPosRankSum=0.693;VQSLOD=2.1516;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:39:23.75:55,0,24	0/1:9,0:9:99:404,0,132	0/0:40,0:23:62.19:0,62,1217	0/0:38,0:20:49.71:0,50,977	0/1:14,0:14:99:114,0,551	1/1:12,0:12:1.13:210,1,0	0/1:15,0:15:0.54:63,0,1	0/0:26,0:25:51.14:0,51,1046	0/1:26,0:26:99:1171,0,594	0/1:24,0:24:99:474,0,718	0/1:13,0:13:99:443,0,327	1/1:30,0:29:17.72:777,18,0	1/1:22,0:21:3.60:234,4,0	1/1:29,0:29:12.04:471,12,0	0/1:34,0:34:99:312,0,1221	0/1:17,0:17:99:626,0,521	0/1:24,0:22:71.31:143,0,71	0/1:18,0:17:29.14:29,0,465	1/1:13,1:13:22.77:639,23,0	1/1:0,25:25:24.08:986,24,0	1/1:36,3:38:51.16:1521,51,0	1/1:10,0:9:2.71:134,3,0	0/1:9,0:9:0.37:102,0,0	1/1:36,0:34:17.99:357,18,0	0/1:15,0:15:99:170,0,503	1/1:2,22:24:57.60:2042,58,0	1/1:5,25:29:29.56:1397,30,0	0/1:15,0:15:49.82:417,0,50
chr10	93653600	.	GTATGT	G	2766	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=10.854;DP=622;FS=2.360;HRun=0;HaplotypeScore=213.9652;InbreedingCoeff=-0.0942;MQ=47.70;MQ0=9;MQRankSum=-8.528;QD=6.83;ReadPosRankSum=0.829;VQSLOD=2.8164;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,6:32:20.93:318,21,0	0/1:9,0:9:64.13:64,0,172	0/0:45,0:26:67.78:0,68,1632	0/0:42,0:20:54.65:0,55,1239	0/0:13,0:13:32.11:0,32,824	0/1:9,0:9:23.34:23,0,307	0/0:14,0:14:7.96:0,8,667	0/0:22,0:21:51.17:0,51,1606	0/1:25,0:25:99:126,0,905	0/0:24,0:24:36.25:0,36,1647	0/1:13,0:13:21.43:21,0,735	0/1:30,0:29:99:143,0,848	0/1:21,0:20:40.12:58,0,40	1/1:27,0:27:12.01:129,12,0	0/0:33,0:33:26.83:0,27,2098	0/1:15,0:15:36.50:36,0,790	1/1:13,11:21:45.11:711,45,0	0/1:18,0:17:0.23:0,0,906	0/1:13,0:12:91.47:91,0,331	0/1:25,0:25:4.84:130,0,5	0/1:37,0:36:36.52:343,0,37	0/1:10,0:9:34.80:35,0,247	0/0:9,0:9:1.69:0,2,292	0/1:34,0:32:49.31:49,0,779	0/0:14,0:14:26.72:0,27,956	0/1:24,0:24:99:271,0,100	1/1:25,0:25:22.98:316,23,0	0/1:13,0:13:61.94:77,0,62
chr10	93653604	.	GT	G	563.84	PASS	AB=0.958;AC=13;AF=0.232;AN=56;BaseQRankSum=9.991;DP=626;FS=2.789;HRun=2;HaplotypeScore=212.1769;InbreedingCoeff=0.4900;MQ=46.65;MQ0=9;MQRankSum=-8.799;QD=2.55;ReadPosRankSum=2.073;VQSLOD=0.0124;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,2:27:18.60:97,19,0	0/0:8,0:8:10.14:0,10,108	0/0:48,1:29:75.65:0,76,1036	0/0:44,0:19:54.10:0,54,707	0/0:12,0:12:29.83:0,30,395	0/0:9,0:9:13.40:0,13,262	0/0:20,0:20:34.77:0,35,593	0/0:21,0:20:51.17:0,51,749	0/0:25,0:25:39.65:0,40,580	0/0:22,0:22:58.31:0,58,891	0/0:13,0:13:21.80:0,22,356	0/0:30,1:30:41.03:0,41,770	0/1:21,0:20:3.53:4,0,38	1/1:27,0:27:6.25:21,6,0	0/0:31,0:31:34.38:0,34,977	0/0:15,0:15:34.20:0,34,509	1/1:18,4:19:39.39:267,39,0	0/0:16,0:15:24.85:0,25,457	0/1:11,2:12:1.07:1,0,175	0/1:25,0:25:8.26:8,0,31	0/1:33,3:35:62.52:278,0,63	0/0:15,0:14:25.24:0,25,326	0/0:13,0:13:33.68:0,34,366	0/0:38,0:36:41.31:0,41,733	0/0:12,0:12:33.03:0,33,469	0/1:24,0:24:5.18:5,0,194	1/1:25,0:25:6.60:39,7,0	0/0:11,0:11:1.79:0,2,49
chr10	93653609	.	GTGAT	G	2863.41	PASS	AB=0.993;AC=30;AF=0.536;AN=56;BaseQRankSum=9.846;DP=612;FS=8.247;HRun=0;HaplotypeScore=215.4616;InbreedingCoeff=-0.5304;MQ=44.20;MQ0=10;MQRankSum=-5.835;QD=5.54;ReadPosRankSum=2.847;VQSLOD=1.7466;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,5:25:2.28:237,0,2	0/1:7,0:7:56.44:56,0,68	0/0:51,0:27:59.50:0,60,1307	0/0:44,0:16:32.98:0,33,808	0/1:10,0:10:88.11:88,0,348	0/1:11,0:11:19.99:20,0,248	0/1:20,0:20:14.91:15,0,523	0/1:17,0:16:70.56:71,0,728	0/1:22,0:22:99:286,0,495	0/1:23,0:22:13.75:14,0,1064	0/1:14,0:14:99:253,0,447	0/1:30,0:29:99:172,0,691	0/1:21,0:20:27.45:47,0,27	1/1:27,0:27:11.96:106,12,0	0/1:27,0:27:13.16:13,0,1101	0/1:14,0:14:99:165,0,390	1/1:12,11:20:41.68:538,42,0	0/1:14,0:13:53.11:53,0,507	0/1:15,0:14:19.33:19,0,272	0/1:25,0:25:37.28:97,0,37	0/1:37,0:36:3.67:4,0,183	0/1:15,0:14:73.44:73,0,206	0/1:12,0:12:37.56:38,0,247	0/1:36,0:34:99:129,0,679	0/1:11,0:11:21.93:22,0,553	0/1:24,0:24:99:154,0,125	1/1:25,0:25:14.16:240,14,0	1/1:11,0:11:11.75:116,12,0
chr10	93653611	.	GAT	G	3812.91	PASS	AB=0.926;AC=30;AF=0.536;AN=56;BaseQRankSum=5.604;DP=619;FS=0.787;HRun=0;HaplotypeScore=200.2449;InbreedingCoeff=-0.6107;MQ=44.11;MQ0=11;MQRankSum=-5.767;QD=6.97;ReadPosRankSum=1.290;VQSLOD=3.4525;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,5:25:2.02:180,0,2	0/1:7,0:7:9.68:10,0,56	0/0:48,1:25:70.05:0,70,1167	0/1:45,1:16:6.28:6,0,647	0/1:12,0:12:99:137,0,281	0/1:10,2:12:99:183,0,228	0/1:13,8:21:99:356,0,435	0/1:18,0:17:97.79:98,0,623	0/1:22,0:22:99:148,0,458	0/0:21,1:21:0.15:0,0,937	0/1:14,0:14:99:182,0,372	0/1:26,2:27:99:259,0,543	0/1:21,0:20:19.86:20,0,28	1/1:27,0:27:11.72:94,12,0	0/1:30,0:30:97.75:98,0,916	0/1:14,0:14:70.42:70,0,441	1/1:16,7:20:42.06:457,42,0	0/1:15,0:14:63.10:63,0,455	0/1:13,0:14:30.53:31,0,251	0/1:25,0:25:44.11:44,0,87	0/1:34,2:37:60.14:60,0,208	0/1:9,5:14:99:346,0,157	0/1:8,4:12:99:267,0,196	0/1:26,8:35:99:406,0,577	0/1:11,0:11:48.99:49,0,456	0/1:24,0:24:74.89:75,0,205	1/1:25,0:25:1.25:111,1,0	1/1:10,0:10:7.70:62,8,0
chr10	93653627	.	GT	G	1593.29	PASS	AB=0.878;AC=17;AF=0.304;AN=56;BaseQRankSum=7.539;DP=706;FS=7.469;HRun=2;HaplotypeScore=210.9439;InbreedingCoeff=-0.3055;MQ=44.83;MQ0=16;MQRankSum=-4.406;QD=4.50;ReadPosRankSum=4.875;VQSLOD=0.4140;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,2:22:36.45:0,36,466	0/1:8,0:8:30.41:110,0,30	0/0:67,0:28:70.93:0,71,974	0/0:56,1:24:69.23:0,69,984	0/1:8,4:12:14.66:15,0,279	0/0:9,3:12:23.86:0,24,308	0/0:18,1:19:26.36:0,26,691	0/1:18,4:21:51.88:52,0,744	0/1:35,4:39:99:248,0,425	0/1:23,9:31:99:268,0,791	0/1:12,2:14:56.85:263,0,57	0/0:18,4:22:10.04:0,10,558	0/1:25,1:25:1.36:1,0,250	0/0:34,0:34:8.73:0,9,320	0/1:30,10:39:99:206,0,526	0/1:18,4:22:81.80:82,0,373	0/0:25,1:23:49.29:0,49,621	0/1:17,3:19:99:129,0,431	0/0:14,1:11:1.40:0,1,372	0/0:24,0:24:32.91:0,33,365	0/0:33,4:37:59.17:0,59,637	0/0:14,2:16:38.74:0,39,488	0/1:12,2:14:0.41:0,0,374	0/1:30,6:34:17.28:17,0,634	0/1:9,3:12:99:115,0,120	0/1:23,0:23:99:149,0,294	0/1:24,0:24:43.06:43,0,360	1/1:10,0:10:1.84:47,2,0
chr10	93653711	.	ATG	A	10821.97	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=8.161;DP=933;FS=17.990;HRun=0;HaplotypeScore=184.9930;InbreedingCoeff=0.9039;MQ=55.51;MQ0=16;MQRankSum=2.928;QD=14.41;ReadPosRankSum=3.158;VQSLOD=3.6931;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,2:50:9.63:0,10,1036	1/1:1,0:8:19.89:98,20,0	0/0:50,0:23:1.02:0,1,171	0/0:42,0:18:12.49:0,12,146	1/1:7,0:31:50.87:249,51,0	1/1:6,17:23:45.14:536,45,0	1/1:8,29:37:76.12:924,76,0	1/1:20,0:37:35.27:180,35,0	1/1:10,0:29:36.93:182,37,0	1/1:16,0:35:51.04:249,51,0	1/1:2,0:19:34.09:168,34,0	1/1:14,34:48:74.82:872,75,0	1/1:17,9:28:41.60:420,42,0	1/1:16,18:34:57.17:679,57,0	1/1:13,0:41:53.56:265,54,0	1/1:7,0:32:47.27:228,47,0	0/0:39,0:39:92.77:0,93,1409	1/1:7,0:34:59.49:290,59,0	1/1:4,10:13:24.07:285,24,0	1/1:10,7:18:29.92:336,30,0	1/1:27,58:82:95.92:1143,96,0	1/1:6,18:24:37.17:558,37,0	1/1:2,19:22:50.90:607,51,0	1/1:16,37:53:41.28:868,41,0	1/1:6,0:20:34.09:168,34,0	1/1:7,25:33:72.05:835,72,0	1/1:3,21:25:50.83:583,51,0	1/1:0,0:7:19.89:98,20,0
chr10	93654289	.	T	TCCTTCCTT	6713.36	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=6.133;DP=651;FS=1.955;HRun=0;HaplotypeScore=162.3830;InbreedingCoeff=0.9732;MQ=59.68;MQ0=4;MQRankSum=-4.479;QD=34.78;ReadPosRankSum=-4.953;VQSLOD=3.8853;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:34.80:733,35,0	0/0:5,0:5:15.02:0,15,259	0/0:18,0:13:10.42:0,10,401	0/0:13,0:8:9.03:0,9,189	0/0:20,0:20:48.16:0,48,1145	0/0:17,0:17:36.07:0,36,791	0/0:24,0:23:63.17:0,63,1275	0/0:30,0:30:51:0,51,728	0/0:32,0:32:87.27:0,87,1963	0/0:21,0:21:51.15:0,51,1118	0/0:9,0:9:21.07:0,21,473	0/0:29,0:29:60.21:0,60,1390	0/0:29,0:29:78.20:0,78,1757	0/0:19,0:19:48.13:0,48,1030	0/0:37,0:37:99:0,99,2106	0/0:23,0:23:66.20:0,66,1482	1/1:28,0:28:36.73:807,37,0	0/0:18,0:18:54.17:0,54,1133	1/1:21,0:21:28.22:645,28,0	1/1:12,0:12:12.98:346,13,0	1/1:26,0:26:32.92:474,33,0	0/0:21,0:21:54.12:0,54,1068	0/0:16,0:16:45.15:0,45,1039	0/0:26,0:26:72.08:0,72,1357	0/0:23,0:23:60.17:0,60,1310	1/1:30,12:45:55.64:2488,56,0	1/1:30,0:29:32.57:1221,33,0	0/0:27,0:27:72.19:0,72,1716
chr10	93654303	.	C	CTT	747.23	PASS	AB=0.880;AC=7;AF=0.125;AN=56;BaseQRankSum=9.543;DP=670;FS=10.144;HRun=0;HaplotypeScore=105.2506;InbreedingCoeff=-0.1429;MQ=54.57;MQ0=6;MQRankSum=-5.546;QD=4.00;ReadPosRankSum=2.449;VQSLOD=1.8079;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,3:27:99:129,0,223	0/0:6,0:6:18.05:0,18,269	0/0:22,0:14:37.77:0,38,571	0/0:19,0:8:21.07:0,21,310	0/0:19,0:19:57.19:0,57,928	0/0:20,0:20:54.18:0,54,876	0/0:25,0:24:72.22:0,72,1123	0/0:29,0:29:81.16:0,81,1198	0/0:34,0:34:99:0,102,1660	0/0:21,0:21:60.18:0,60,911	0/0:11,0:10:30.10:0,30,488	0/0:24,0:24:69.24:0,69,1124	0/0:30,0:30:90.31:0,90,1456	0/0:20,0:20:60.17:0,60,948	0/0:37,0:37:99:0,105,1711	0/0:25,0:25:75.23:0,75,1175	0/1:31,4:35:64.27:64,0,441	0/0:22,0:22:66.20:0,66,1038	0/1:17,1:18:18.41:18,0,204	0/1:11,2:13:21.05:21,0,158	0/1:27,0:27:99:110,0,171	0/0:23,0:23:69.21:0,69,1073	0/0:18,0:18:54.18:0,54,879	0/0:30,0:30:87.21:0,87,1310	0/0:20,0:20:60.19:0,60,935	0/1:32,11:43:99:321,0,298	0/1:16,8:23:99:214,0,161	0/0:27,0:27:81.25:0,81,1289
chr10	93654490	.	GT	G	3838	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-9.938;DP=577;FS=9.982;HRun=9;HaplotypeScore=118.5663;InbreedingCoeff=0.9762;MQ=64.77;MQ0=17;MQRankSum=10.395;QD=11.22;ReadPosRankSum=0.447;VQSLOD=1.8279;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,1:32:31.12:144,31,0	1/1:0,8:8:14.56:96,15,0	0/0:62,0:22:24.29:0,24,246	0/0:55,0:12:14.76:0,15,118	1/1:3,2:18:33.29:190,33,0	0/0:19,0:21:52.42:0,52,245	0/0:13,0:14:36.08:0,36,213	1/1:2,21:23:60.86:467,61,0	1/1:1,5:8:17.87:100,18,0	1/1:3,15:21:50.40:280,50,0	1/1:2,1:11:17.78:93,18,0	0/0:13,0:13:31.16:0,31,155	0/0:14,0:17:32.61:0,33,164	0/0:13,0:16:36.78:0,37,184	1/1:2,11:15:12.27:84,12,0	1/1:4,7:13:35.27:238,35,0	1/1:11,2:40:53.02:206,53,0	1/1:5,10:15:9.41:70,9,0	1/1:5,10:14:32.73:252,33,0	1/1:8,2:10:23.70:172,24,0	1/1:8,2:10:23.90:189,24,0	0/0:10,0:10:22.99:0,23,113	0/0:14,0:16:37.11:0,37,201	0/0:9,0:11:16.86:0,17,84	1/1:3,18:25:32.60:236,33,0	1/1:9,22:31:43.23:496,43,0	1/1:7,19:26:37.10:346,37,0	1/1:5,15:20:20.96:178,21,0
chr10	93654497	.	TTTA	T	1507.55	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-1.345;DP=591;FS=2.314;HRun=0;HaplotypeScore=130.6508;InbreedingCoeff=0.4104;MQ=66.18;MQ0=19;MQRankSum=4.393;QD=6.42;ReadPosRankSum=4.872;VQSLOD=2.8463;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,5:35:2.81:181,3,0	1/1:8,0:8:9.37:72,9,0	0/0:66,0:20:15.67:0,16,469	0/0:58,0:14:31.29:0,31,312	0/1:24,0:23:13.14:184,0,13	0/0:21,0:21:61.32:0,61,466	0/0:13,0:13:38.90:0,39,415	0/0:25,0:25:50.72:0,51,404	0/1:12,0:12:30.98:52,0,31	0/1:25,0:24:0.48:318,0,0	1/1:10,0:10:6.70:109,7,0	0/0:12,0:12:32.66:0,33,258	0/0:14,0:14:35.78:0,36,314	0/0:14,0:14:37.06:0,37,303	0/1:17,0:17:24.57:25,0,27	1/1:13,0:14:17.30:158,17,0	1/1:32,6:38:52.56:451,53,0	0/1:13,0:13:19.16:37,0,19	0/0:12,0:11:22.18:0,22,224	0/0:14,0:14:15.92:0,16,145	0/1:10,0:10:2.17:2,0,105	0/0:9,0:9:20.06:0,20,184	0/0:15,0:15:40.65:0,41,373	0/0:10,0:10:14.18:0,14,153	0/1:29,0:29:72.98:94,0,73	0/0:28,0:28:19.75:0,20,449	0/0:27,0:27:40.32:0,40,408	0/0:18,0:18:11.63:0,12,155
chr10	93654498	.	TTA	T	1462.76	PASS	AB=0.960;AC=24;AF=0.429;AN=56;BaseQRankSum=1.194;DP=595;FS=28.513;HRun=0;HaplotypeScore=122.8088;InbreedingCoeff=-0.0072;MQ=65.38;MQ0=19;MQRankSum=5.043;QD=3.96;ReadPosRankSum=9.416;VQSLOD=0.4419;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:1.06:106,0,1	1/1:8,0:8:9.87:44,10,0	0/0:66,0:20:29.67:0,30,302	0/0:57,0:13:19.96:0,20,170	0/1:24,0:23:21.48:92,0,21	0/0:20,0:20:17.27:0,17,116	0/0:14,0:14:18.50:0,18,156	0/1:25,0:25:4.63:180,0,5	0/1:12,0:12:37.40:47,0,37	0/1:26,0:25:40.88:89,0,41	1/1:10,0:10:1.40:43,1,0	0/1:12,0:12:2.17:2,0,36	0/0:15,0:15:20:0,20,111	0/1:14,0:14:0.21:0,0,65	0/0:17,0:17:1.18:0,1,40	0/1:15,0:15:15.97:26,0,16	1/1:39,0:39:48.75:315,49,0	0/0:13,0:13:4.84:0,5,29	1/1:12,0:11:8.53:46,9,0	0/1:5,9:14:26.90:121,0,27	1/1:9,1:10:13.47:125,13,0	0/0:9,0:9:4.02:0,4,46	0/0:15,0:15:2.12:0,2,93	0/1:11,0:11:1.16:1,0,37	0/1:29,0:29:16:16,0,77	0/1:27,0:27:12.22:201,0,12	0/1:26,2:28:57.92:92,0,58	0/1:16,2:18:9.07:79,0,9
chr10	93654499	.	TAAAAAAAA	T	3165.83	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=5.565;DP=585;FS=7.996;HRun=16;HaplotypeScore=164.7852;InbreedingCoeff=0.9772;MQ=65.84;MQ0=19;MQRankSum=-9.264;QD=35.57;ReadPosRankSum=5.254;VQSLOD=0.4868;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:48.16:0,48,1692	0/0:8,0:8:12.51:0,13,394	0/0:64,0:19:26.18:0,26,413	0/0:56,0:13:30.09:0,30,504	0/0:26,0:25:60.15:0,60,1652	1/1:3,5:19:41.08:760,41,0	1/1:3,3:9:14.27:273,14,0	0/0:26,0:26:60.21:0,60,1957	0/0:14,0:14:39.13:0,39,1346	0/0:27,0:26:72.08:0,72,2434	0/0:12,0:12:27.09:0,27,945	1/1:0,5:10:27.09:502,27,0	1/1:4,8:13:16.27:364,16,0	1/1:4,2:12:20.12:397,20,0	0/0:17,0:17:21.07:0,21,815	0/0:16,0:16:48.08:0,48,1704	0/0:39,0:39:84.29:0,84,2923	0/0:13,0:13:17.27:0,17,551	0/0:13,0:12:33.11:0,33,1166	0/0:14,0:14:36.12:0,36,1167	0/0:10,0:10:21.07:0,21,692	1/1:1,5:8:21.07:431,21,0	1/1:2,3:10:22.98:422,23,0	1/1:3,3:8:10.75:222,11,0	0/0:29,0:29:57.20:0,57,2143	0/0:27,0:28:26.81:0,27,2220	0/0:28,0:28:62.39:0,62,2037	0/0:18,0:18:24.08:0,24,831
chr10	93655186	.	TAA	T	5815.03	PASS	AB=0.615;AC=41;AF=0.732;AN=56;BaseQRankSum=-9.536;DP=538;FS=5.524;HRun=15;HaplotypeScore=73.7806;InbreedingCoeff=0.5337;MQ=61.42;MQ0=5;MQRankSum=-0.436;QD=12.40;ReadPosRankSum=0.594;VQSLOD=3.9034;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,18:28:4.88:258,5,0	1/1:1,8:9:20.97:185,21,0	0/0:16,0:11:14.74:0,15,127	0/0:8,0:8:5.56:0,6,30	1/1:8,16:25:38.65:343,39,0	0/1:10,1:21:25.99:26,0,43	0/1:5,1:15:6.42:6,0,38	1/1:10,19:29:50.23:482,50,0	1/1:5,23:28:24.32:370,24,0	1/1:6,15:21:38.78:340,39,0	1/1:1,17:21:30.86:296,31,0	0/1:1,1:11:3.81:4,0,45	0/1:8,1:16:7.96:8,0,49	0/0:2,0:11:9.86:0,10,34	1/1:3,19:23:29.68:249,30,0	1/1:9,10:20:15.39:256,15,0	1/1:6,23:30:59.66:514,60,0	1/1:5,19:25:41.57:414,42,0	1/1:6,7:14:23.31:173,23,0	1/1:7,18:28:20.32:317,20,0	1/1:5,10:15:23.96:211,24,0	0/1:3,1:7:13.57:14,0,21	0/0:9,0:20:7.69:0,8,126	0/0:3,0:12:12.48:0,12,43	1/1:7,12:19:15.02:293,15,0	1/1:6,20:26:56.87:499,57,0	1/1:6,16:23:46.34:373,46,0	1/1:3,7:10:20.92:185,21,0
chr10	93655890	.	CGG	C	6925.55	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.191;DP=655;FS=2.897;HRun=3;HaplotypeScore=79.5868;InbreedingCoeff=0.9999;MQ=87.25;MQ0=1;MQRankSum=-1.235;QD=39.13;ReadPosRankSum=3.350;VQSLOD=4.7082;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.28:0,87,1644	0/0:12,0:12:33.11:0,33,637	0/0:20,0:20:57.19:0,57,1060	0/0:26,0:26:78.27:0,78,1422	0/0:21,0:21:60.21:0,60,1115	1/1:0,24:24:66.22:1010,66,0	1/1:1,20:21:51.13:755,51,0	0/0:36,0:36:99:0,102,1965	0/0:20,0:20:60.19:0,60,1100	0/0:28,0:28:84.29:0,84,1616	0/0:24,0:24:72.25:0,72,1389	1/1:1,20:21:48.16:735,48,0	1/1:0,12:12:36.12:551,36,0	1/1:0,20:20:54.14:801,54,0	0/0:24,0:24:69.23:0,69,1302	0/0:23,0:23:66.23:0,66,1249	0/0:19,0:19:54.19:0,54,1037	0/0:15,0:15:45.15:0,45,869	0/0:23,0:23:69.24:0,69,1325	0/0:36,0:36:99:0,108,2079	0/0:25,0:25:75.26:0,75,1449	1/1:0,23:23:54.18:827,54,0	1/1:1,33:34:87.29:1329,87,0	1/1:0,22:21:60.20:919,60,0	0/0:28,0:28:84.27:0,84,1557	0/0:34,1:35:59.40:0,59,1893	0/0:21,0:21:63.22:0,63,1190	0/0:13,0:13:39.13:0,39,753
chr10	93656007	.	CAA	C	4845.50	PASS	AB=0.704;AC=39;AF=0.696;AN=56;BaseQRankSum=-4.106;DP=605;FS=4.477;HRun=15;HaplotypeScore=84.9168;InbreedingCoeff=0.5351;MQ=75.98;MQ0=4;MQRankSum=-1.147;QD=10.72;ReadPosRankSum=6.810;VQSLOD=3.7230;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,1:27:41.69:0,42,714	1/1:2,10:13:23.85:256,24,0	0/0:27,1:17:22.50:0,22,283	0/1:17,1:13:3.77:4,0,149	1/1:7,18:28:48.73:447,49,0	1/1:5,12:19:11.64:194,12,0	1/1:9,7:19:11.15:162,11,0	0/0:11,1:29:12.35:0,12,159	1/1:3,12:15:29.92:264,30,0	1/1:14,12:28:29.36:293,29,0	1/1:6,15:23:23.56:343,24,0	1/1:5,14:20:26.79:282,27,0	1/1:8,13:21:38.87:336,39,0	1/1:4,10:17:36.33:289,36,0	1/1:2,20:24:41.56:355,42,0	1/1:3,12:17:2.17:246,2,0	0/0:14,0:22:59.56:0,60,628	1/1:1,9:11:23.73:197,24,0	0/1:10,1:22:9.69:10,0,242	0/0:7,1:31:7.68:0,8,211	0/1:5,1:15:14.98:15,0,37	1/1:8,13:28:40.11:326,40,0	1/1:3,13:17:35.92:317,36,0	1/1:3,15:19:20.77:229,21,0	1/1:2,10:16:31.96:232,32,0	0/1:8,3:26:35.17:35,0,79	0/1:20,6:32:13.27:13,0,158	0/0:7,0:15:3.39:0,3,163
chr10	93656244	.	CAAA	C	6124.22	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.754;DP=622;FS=4.958;HRun=7;HaplotypeScore=91.4268;InbreedingCoeff=0.9945;MQ=66.72;MQ0=2;MQRankSum=-3.544;QD=33.10;ReadPosRankSum=5.454;VQSLOD=3.0629;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.22:0,72,1461	0/0:4,0:4:12.04:0,12,268	0/0:24,0:20:51.17:0,51,864	0/0:17,0:16:42.14:0,42,803	0/0:18,0:18:48.16:0,48,968	1/1:3,23:25:63.21:965,63,0	1/1:3,24:26:66.22:1008,66,0	0/0:37,0:37:99:0,102,1853	0/0:20,0:20:54.18:0,54,1062	0/0:19,0:19:51.16:0,51,941	0/0:11,0:11:30.10:0,30,627	1/1:0,27:27:50.81:779,51,0	1/1:2,21:21:47.52:697,48,0	1/1:1,21:19:48.16:724,48,0	0/0:31,0:31:87.28:0,87,1746	0/0:20,0:20:60.20:0,60,1174	0/0:22,0:22:66.21:0,66,1330	0/0:25,0:25:72.25:0,72,1520	0/0:25,0:24:69.23:0,69,1335	0/0:21,0:21:57.19:0,57,1085	0/0:25,0:25:72.24:0,72,1404	1/1:0,16:16:35.91:539,36,0	1/1:4,14:18:36.11:550,36,0	1/1:4,22:26:57.19:862,57,0	0/0:17,0:17:42.14:0,42,877	0/0:31,0:31:90.29:0,90,1734	0/0:34,0:34:96.33:0,96,1955	0/0:9,0:9:27.09:0,27,541
chr10	93656729	.	TA	T	2208.72	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.667;DP=424;FS=0.504;HRun=1;HaplotypeScore=65.9945;InbreedingCoeff=0.9214;MQ=70.12;MQ0=4;MQRankSum=1.669;QD=30.26;ReadPosRankSum=-0.952;VQSLOD=3.0577;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.19:0,90,1213	0/0:10,0:10:30.03:0,30,374	0/0:22,0:13:29.25:0,29,398	0/0:17,1:15:9.64:0,10,277	0/0:20,0:20:57.14:0,57,756	1/1:8,14:22:66.04:778,66,0	1/1:0,3:3:9.03:126,9,0	0/0:26,0:26:78.06:0,78,1026	0/0:10,0:10:30.10:0,30,431	0/0:17,0:17:51.04:0,51,648	0/0:13,0:13:39.10:0,39,545	1/1:0,10:10:18.06:251,18,0	1/1:0,12:12:24.08:334,24,0	1/1:0,13:13:36.12:501,36,0	0/0:5,0:5:15.02:0,15,181	0/0:8,0:8:24.05:0,24,304	0/0:27,0:27:66.52:0,67,935	0/0:33,0:32:93.23:0,93,1262	0/0:22,0:22:65.92:0,66,865	0/0:15,0:15:45.12:0,45,611	0/0:2,0:2:6.02:0,6,80	1/1:0,4:4:12.04:167,12,0	1/1:0,5:5:15.05:208,15,0	1/1:0,4:4:3.01:41,3,0	0/0:15,0:15:45.08:0,45,605	0/0:24,0:24:72.21:0,72,1001	0/0:24,0:23:72.21:0,72,1012	0/0:9,0:9:27.07:0,27,374
chr10	93657317	.	A	ACGCGCGCG	294.87	PASS	AB=1.000;AC=5;AF=0.093;AN=54;BaseQRankSum=2.705;DP=463;FS=0.999;HRun=0;HaplotypeScore=137.4046;InbreedingCoeff=0.2210;MQ=72.16;MQ0=1;MQRankSum=-3.120;QD=5.08;ReadPosRankSum=-2.279;VQSLOD=2.2059;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:17:18.01:214,18,0	0/0:5,0:5:3:0,3,25	0/0:16,0:15:23.89:0,24,224	0/0:10,0:8:4.64:0,5,33	0/0:16,0:16:9:0,9,98	0/0:21,0:21:39.04:0,39,633	0/0:26,0:25:51.16:0,51,1154	0/0:18,0:18:45.07:0,45,709	0/0:19,0:19:15.02:0,15,257	0/0:23,0:22:60.64:0,61,1171	0/0:13,0:13:18.02:0,18,255	0/0:18,0:18:15.46:0,15,606	0/0:14,0:14:21:0,21,293	0/0:10,0:10:18.03:0,18,354	0/0:16,0:16:5.99:0,6,50	0/0:18,0:18:15.97:0,16,298	./.	0/0:40,0:40:57.11:0,57,1287	0/1:12,0:12:50.10:50,0,222	0/1:11,0:11:66.67:67,0,135	0/0:19,0:19:23.93:0,24,215	0/0:15,0:15:30.09:0,30,713	0/0:5,0:5:6.01:0,6,100	0/0:24,0:24:15.02:0,15,743	0/0:20,0:20:21:0,21,205	0/1:17,0:17:84.09:84,0,264	0/0:16,0:16:27.24:0,27,246	0/0:6,0:6:12.04:0,12,302
chr10	93657321	.	T	TACGCGCG	81.61	PASS	AB=0.859;AC=7;AF=0.125;AN=56;BaseQRankSum=4.999;DP=450;FS=1.043;HRun=0;HaplotypeScore=131.1593;InbreedingCoeff=-0.0143;MQ=67.83;MQ0=4;MQRankSum=-2.134;QD=1.05;ReadPosRankSum=-1.146;VQSLOD=2.1968;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:15:9.74:10,0,43	0/0:7,0:7:3.01:0,3,42	0/0:9,0:9:17.71:0,18,195	0/1:7,0:6:3.75:4,0,17	0/0:15,0:15:5.99:0,6,64	0/0:21,0:21:33.08:0,33,550	0/0:28,0:26:51.05:0,51,1049	0/0:13,0:13:39.09:0,39,620	0/0:17,0:17:15.03:0,15,248	0/0:22,0:22:63.41:0,63,1136	0/0:13,0:12:18.03:0,18,255	0/0:18,0:18:9.02:0,9,537	0/0:15,0:14:24.07:0,24,384	0/0:11,0:11:18.01:0,18,345	0/0:16,0:16:6.01:0,6,65	0/0:17,0:17:15.52:0,16,291	1/1:11,0:11:0.47:1,0,0	0/0:37,0:37:54.16:0,54,1121	0/1:6,0:12:54.02:54,0,247	0/1:7,0:13:42.44:42,0,173	0/0:11,1:21:18.34:0,18,265	0/0:18,0:18:30.09:0,30,625	0/0:5,0:5:7.57:0,8,109	0/0:24,0:24:37.66:0,38,743	0/0:22,0:22:21.01:0,21,222	0/1:17,0:17:79.28:79,0,243	0/0:9,0:17:26.88:0,27,369	0/0:4,0:4:12.04:0,12,264
chr10	93657333	.	G	GCACACACA	745.10	PASS	AB=1.000;AC=16;AF=0.381;AN=42;BaseQRankSum=-1.433;DP=435;FS=4.238;HRun=0;HaplotypeScore=135.4644;InbreedingCoeff=0.3519;MQ=55.93;MQ0=11;MQRankSum=-2.368;QD=4.97;ReadPosRankSum=-2.397;VQSLOD=1.9975;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/1:6,0:6:0:0,0,0	./.	./.	./.	1/1:11,4:18:3.01:56,3,0	1/1:33,0:30:14.69:241,15,0	0/0:15,0:15:0.63:0,1,204	0/0:17,0:17:6.20:0,6,74	0/0:19,0:18:24.08:0,24,446	0/0:9,0:8:3.01:0,3,56	1/1:19,0:18:2.87:77,3,0	1/1:12,0:11:3.01:36,3,0	./.	0/0:16,0:16:3.01:0,3,64	0/0:16,0:16:9.03:0,9,168	1/1:15,0:15:10.69:252,11,0	0/0:37,0:37:42.03:0,42,730	0/1:7,0:6:49.95:50,0,117	0/1:7,0:7:39.16:39,0,54	0/0:17,0:16:9.03:0,9,191	./.	./.	1/1:26,0:26:2.73:122,3,0	0/0:17,0:17:0:0,0,0	0/0:11,0:10:12.03:0,12,210	0/0:13,0:12:0.47:0,0,1	0/1:7,0:7:0.86:1,0,34
chr10	93657579	.	G	GCAAGGACTCTA	15772.69	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-6.744;DP=537;FS=11.770;HRun=0;HaplotypeScore=178.1590;InbreedingCoeff=0.9963;MQ=77.51;MQ0=1;MQRankSum=-14.570;QD=132.54;ReadPosRankSum=-0.005;VQSLOD=4.9779;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:72.25:0,72,2368	0/0:7,0:7:21.07:0,21,741	0/0:14,0:14:37.37:0,37,1073	0/0:15,0:16:35.79:0,36,1209	0/0:16,0:16:45.15:0,45,1494	1/1:6,11:17:48.16:2633,48,0	1/1:10,8:22:54.14:2692,54,0	0/0:29,0:29:81.26:0,81,2484	0/0:15,0:15:27.09:0,27,898	0/0:25,0:24:63.22:0,63,2066	0/0:24,0:24:63.20:0,63,1848	1/1:3,8:11:33.11:1851,33,0	1/1:6,6:13:39.13:2087,39,0	1/1:1,7:8:24.08:1361,24,0	0/0:14,0:14:27.01:0,27,919	0/0:12,0:12:30.10:0,30,1059	0/0:42,0:42:99:0,105,3328	0/0:25,0:25:54.19:0,54,1794	0/0:27,0:27:78.22:0,78,2484	0/0:19,0:19:57.18:0,57,1897	0/0:18,0:18:48.14:0,48,1551	1/1:9,6:15:36.12:1872,36,0	1/1:5,13:18:48.16:2384,48,0	1/1:6,7:12:16.07:892,16,0	0/0:19,0:19:51.17:0,51,1635	0/0:28,0:28:81.23:0,81,2707	0/0:15,0:15:36.12:0,36,1268	0/0:19,0:18:38.95:0,39,1376
chr10	93657621	.	TTTTTTTTTTTTTCC	T	2073.50	PASS	AB=0.850;AC=14;AF=0.250;AN=56;BaseQRankSum=5.611;DP=577;FS=0.783;HRun=0;HaplotypeScore=197.6425;InbreedingCoeff=0.6310;MQ=59.52;MQ0=33;MQRankSum=-5.412;QD=22.79;ReadPosRankSum=3.958;VQSLOD=2.6563;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:51.18:0,51,2655	0/0:5,0:5:9.03:0,9,368	0/0:49,0:14:23.07:0,23,347	0/0:40,0:12:20.69:0,21,745	0/0:22,0:21:37.57:0,38,1411	0/1:10,4:14:37.59:406,0,38	1/1:10,5:15:23.68:800,24,0	0/0:29,0:28:67.27:0,67,2395	0/0:16,0:16:21.07:0,21,938	0/0:23,0:20:45.06:0,45,1701	0/0:21,0:18:37.01:0,37,1099	1/1:5,1:5:2.58:106,3,0	0/1:11,1:12:19.57:98,0,20	1/1:9,1:8:4.93:181,5,0	0/0:21,0:20:39.61:0,40,1650	0/0:15,0:15:27.09:0,27,1130	0/0:47,0:47:99:0,103,4788	0/0:26,0:26:41.96:0,42,1740	0/0:23,0:22:40.69:0,41,1697	0/0:18,0:18:34.36:0,34,1400	0/0:13,0:11:3.44:0,3,723	1/1:6,1:6:5.74:202,6,0	1/1:12,1:13:5.30:143,5,0	1/1:12,2:10:5.19:302,5,0	0/0:15,0:15:22.84:0,23,918	0/0:20,0:20:46.93:0,47,1827	0/0:28,0:27:41.22:0,41,1648	0/0:15,0:12:21.54:0,22,833
chr10	93658618	.	CA	C	10040.92	PASS	AB=0.533;AC=25;AF=0.446;AN=56;BaseQRankSum=18.941;DP=618;FS=4.284;HRun=4;HaplotypeScore=102.3553;InbreedingCoeff=0.9136;MQ=83.55;MQ0=1;MQRankSum=-2.469;QD=31.67;ReadPosRankSum=4.422;VQSLOD=4.8688;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,157,2167	0/0:7,0:7:21.06:0,21,278	0/0:16,0:16:42.14:0,42,574	0/0:19,0:19:53.26:0,53,640	0/0:15,0:15:45.14:0,45,613	1/1:0,18:18:51.16:612,51,0	1/1:2,26:28:72.22:864,72,0	0/0:23,0:23:69.22:0,69,938	0/0:26,0:26:78.24:0,78,1074	0/0:10,0:10:30.10:0,30,420	0/0:7,0:7:18.05:0,18,235	1/1:0,19:19:42.13:504,42,0	1/1:0,15:15:39.12:468,39,0	1/1:0,32:32:90.28:1080,90,0	0/0:22,0:22:66.20:0,66,906	0/0:20,0:20:60.20:0,60,840	0/0:41,0:41:99:0,123,1685	0/0:31,0:31:90.29:0,90,1243	1/1:0,19:18:54.11:610,54,0	1/1:0,16:16:45.14:539,45,0	1/1:1,69:70:99:2302,193,0	1/1:0,18:18:48.15:576,48,0	1/1:0,9:9:27.08:324,27,0	1/1:1,30:31:75.23:900,75,0	0/0:8,0:8:24.08:0,24,336	0/1:3,21:24:14.84:687,0,15	1/1:0,18:18:48.15:576,48,0	0/0:2,0:2:6.02:0,6,84
chr10	93659970	.	C	CT	1878.60	PASS	AB=0.864;AC=30;AF=0.536;AN=56;BaseQRankSum=-4.321;DP=512;FS=2.132;HRun=15;HaplotypeScore=74.3953;InbreedingCoeff=0.2545;MQ=65.73;MQ0=2;MQRankSum=-1.078;QD=4.97;ReadPosRankSum=-1.957;VQSLOD=1.7931;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,17:23:20.95:171,21,0	1/1:1,7:7:17.94:145,18,0	0/1:13,0:11:5.24:5,0,35	0/1:8,0:6:0:0,0,0	1/1:12,9:22:10.12:169,10,0	0/1:16,3:20:16.01:16,0,133	0/1:11,0:11:11.27:11,0,46	1/1:13,11:26:0.85:206,1,0	1/1:6,11:18:17.51:126,18,0	0/1:7,11:18:17.80:179,0,18	0/1:10,14:24:6.21:261,0,6	0/1:13,0:18:0.34:0,0,76	0/0:19,0:19:6.39:0,6,123	0/0:13,1:16:5.39:0,5,130	1/1:7,7:14:12.14:80,12,0	1/1:3,10:15:7.42:140,7,0	1/1:9,5:23:2.64:122,3,0	1/1:7,15:22:2.88:230,3,0	0/0:21,0:21:23.05:0,23,143	0/0:22,4:26:25.33:0,25,262	0/0:6,0:8:15.81:0,16,83	0/0:5,0:6:4.95:0,5,24	0/0:22,0:23:37.06:0,37,221	0/0:13,2:15:7.16:0,7,152	1/1:4,9:12:3:25,3,0	0/1:24,0:24:11.86:12,0,142	0/1:35,4:38:2.55:3,0,200	0/1:6,11:17:8.13:150,0,8
chr10	93660386	.	C	CAAA	7542.21	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-2.371;DP=410;FS=2.383;HRun=13;HaplotypeScore=68.0780;InbreedingCoeff=0.4483;MQ=45.82;MQ0=17;MQRankSum=-0.822;QD=18.72;ReadPosRankSum=2.004;VQSLOD=3.6972;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,14:24:44.13:618,44,0	1/1:1,4:5:8.99:127,9,0	0/1:4,0:2:9.30:9,0,25	0/0:7,0:4:6.45:0,6,64	1/1:6,9:19:29.97:395,30,0	1/1:8,4:14:33.04:420,33,0	1/1:9,7:16:14.73:271,15,0	1/1:16,3:23:24.02:305,24,0	1/1:11,1:16:14.96:173,15,0	1/1:7,8:16:27.07:413,27,0	1/1:4,6:14:24.06:365,24,0	1/1:7,7:13:15.05:248,15,0	1/1:6,2:8:14.98:177,15,0	1/1:8,5:11:15.05:258,15,0	1/1:5,12:17:30.05:496,30,0	1/1:7,3:10:9.03:150,9,0	1/1:7,6:14:21.03:300,21,0	1/1:10,9:18:18.06:311,18,0	1/1:12,7:24:36.04:495,36,0	1/1:4,3:13:24.20:196,24,0	1/1:4,2:7:12.02:173,12,0	1/1:3,6:9:14.96:183,15,0	1/1:8,2:9:6.02:107,6,0	1/1:11,3:11:9.03:145,9,0	1/1:6,2:11:15.01:185,15,0	1/1:6,2:16:30.48:366,30,0	1/1:4,9:14:21.94:344,22,0	1/1:9,7:12:18.06:311,18,0
chr10	93660554	.	TTTTTG	T	1689.03	PASS	AB=0.974;AC=18;AF=0.321;AN=56;BaseQRankSum=3.859;DP=494;FS=20.479;HRun=0;HaplotypeScore=119.1245;InbreedingCoeff=-0.1322;MQ=65.19;MQ0=11;MQRankSum=-7.226;QD=9.60;ReadPosRankSum=5.205;VQSLOD=1.0137;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:44.55:0,45,609	0/0:2,0:2:6.01:0,6,63	0/0:79,0:26:39.42:0,39,608	0/0:70,0:21:13.71:0,14,304	0/0:19,0:19:24.01:0,24,215	0/1:6,0:6:25.54:30,0,26	0/1:13,0:13:24.43:155,0,24	0/0:38,0:38:43.46:0,43,620	0/0:9,0:9:9.77:0,10,222	0/0:15,0:15:9.53:0,10,186	0/0:20,0:20:46.43:0,46,335	0/1:3,0:3:33.97:37,0,34	0/1:7,0:7:67.66:68,0,70	0/1:9,1:11:36.04:238,0,36	0/1:12,0:12:5.13:5,0,140	0/1:10,0:10:1.01:1,0,122	0/0:15,0:15:30.07:0,30,351	0/0:18,0:18:17.23:0,17,249	0/1:20,2:22:95.09:306,0,95	1/1:11,0:11:11.43:180,11,0	0/1:5,0:4:7.04:53,0,7	0/1:8,0:8:3.86:153,0,4	1/1:11,1:12:2.41:166,2,0	0/1:10,1:10:54.59:129,0,55	0/1:18,1:19:30.53:31,0,245	0/1:14,0:14:95.82:102,0,96	0/1:12,0:12:22.16:196,0,22	0/0:10,0:10:16.81:0,17,125
chr10	93660555	.	TTTTG	T	1164.91	PASS	AB=0.970;AC=27;AF=0.482;AN=56;BaseQRankSum=6.937;DP=490;FS=40.546;HRun=0;HaplotypeScore=112.3461;InbreedingCoeff=-0.6604;MQ=63.17;MQ0=11;MQRankSum=-7.973;QD=3.02;ReadPosRankSum=7.398;VQSLOD=-0.1578;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:6.76:0,7,376	0/0:2,0:2:5.98:0,6,47	0/0:79,0:26:27.81:0,28,501	0/1:67,0:19:13.22:13,0,153	0/1:18,0:18:23.10:23,0,71	0/1:6,0:6:19.12:42,0,19	0/1:14,0:14:50.91:57,0,51	0/1:36,1:37:45.09:45,0,272	0/1:7,1:8:22.25:22,0,106	0/1:14,1:15:74.95:75,0,101	0/1:19,0:19:18.19:18,0,120	0/1:2,0:3:19.49:19,0,34	0/1:6,1:7:69.32:69,0,69	0/1:11,0:11:32.94:151,0,33	0/1:12,0:12:33.24:33,0,68	0/1:10,0:10:28.40:28,0,30	0/1:16,0:16:5.25:5,0,211	0/1:16,0:16:37.81:38,0,108	0/1:22,0:22:99:157,0,100	1/1:11,0:11:5.19:67,5,0	0/1:5,0:4:4.79:5,0,12	0/1:8,0:8:6.97:49,0,7	1/1:11,1:12:1.92:154,2,0	0/1:11,0:10:55.25:55,0,59	0/1:18,1:19:42.66:43,0,83	0/1:14,0:14:36.82:37,0,80	0/1:12,0:13:23.47:97,0,23	0/1:10,0:10:12.65:13,0,37
chr10	93660744	.	G	GTT	4242.37	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=-9.385;DP=536;FS=1.364;HRun=13;HaplotypeScore=88.9916;InbreedingCoeff=0.8504;MQ=69.35;MQ0=2;MQRankSum=1.089;QD=16.70;ReadPosRankSum=-4.347;VQSLOD=3.1299;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:30:44.69:0,45,437	1/1:4,5:9:15.03:183,15,0	0/1:32,0:13:14.83:38,0,15	0/1:15,0:8:4.77:5,0,11	1/1:8,19:34:73.22:803,73,0	0/0:16,0:16:35.73:0,36,316	0/0:18,0:18:44.65:0,45,395	1/1:11,21:34:65.26:792,65,0	1/1:3,14:18:21.06:273,21,0	1/1:8,18:28:50.61:614,51,0	1/1:4,14:18:39.02:486,39,0	0/0:6,0:6:11.87:0,12,101	0/0:15,0:15:32.70:0,33,285	0/0:13,0:14:31.16:0,31,254	1/1:2,10:14:17.28:192,17,0	1/1:1,9:12:23.56:275,24,0	0/0:29,0:29:56.32:0,56,469	1/1:3,14:17:24.08:326,24,0	0/0:24,0:24:49.16:0,49,421	0/0:21,0:21:43.15:0,43,373	0/0:16,0:16:41.82:0,42,360	0/0:20,0:20:53.71:0,54,467	0/0:14,0:14:20.57:0,21,229	0/0:20,0:20:41.33:0,41,369	1/1:3,3:13:15.04:175,15,0	0/0:19,0:20:46.98:0,47,406	0/0:19,0:19:44.64:0,45,395	1/1:4,4:7:6.02:81,6,0
chr10	93661324	.	C	CT	3183.74	PASS	AB=0.986;AC=24;AF=0.429;AN=56;BaseQRankSum=-5.093;DP=525;FS=11.672;HRun=11;HaplotypeScore=79.8654;InbreedingCoeff=0.7561;MQ=60.61;MQ0=17;MQRankSum=-2.772;QD=12.53;ReadPosRankSum=-4.323;VQSLOD=1.1438;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:2.59:3,0,69	1/1:9,3:12:4.20:166,4,0	0/0:24,0:10:5.86:0,6,39	0/0:14,0:8:6.72:0,7,47	1/1:15,7:22:45.99:442,46,0	0/0:27,0:27:42.99:0,43,330	0/0:13,0:13:25.66:0,26,160	1/1:23,10:33:68.42:638,68,0	1/1:10,1:10:8.98:80,9,0	1/1:15,5:21:46.03:389,46,0	1/1:6,16:22:28.70:433,29,0	0/0:18,0:18:37.37:0,37,228	0/0:10,0:10:13.70:0,14,77	0/0:14,0:14:24.70:0,25,154	1/1:12,2:14:17.90:167,18,0	1/1:11,4:15:30.01:293,30,0	0/0:9,0:28:26.94:0,27,77	1/1:10,4:15:41.01:376,41,0	0/1:33,1:34:23.73:24,0,278	0/0:25,0:25:15.72:0,16,293	0/0:7,0:7:8.57:0,9,69	0/0:13,0:13:5.24:0,5,130	0/0:14,0:14:32.55:0,33,221	0/0:14,0:14:27.29:0,27,176	1/1:12,5:17:0.62:162,1,0	0/0:24,0:24:37.57:0,38,362	0/0:23,0:22:25.28:0,25,175	1/1:12,1:8:23.86:218,24,0
chr10	93661336	.	C	CT	4442.28	PASS	AB=0.743;AC=42;AF=0.750;AN=56;BaseQRankSum=-1.952;DP=537;FS=1.934;HRun=12;HaplotypeScore=75.5003;InbreedingCoeff=0.1358;MQ=50.95;MQ0=26;MQRankSum=0.632;QD=9.31;ReadPosRankSum=-0.129;VQSLOD=4.0964;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:23:26.93:294,27,0	0/1:7,4:11:0.67:102,0,1	0/0:16,0:2:2.98:0,3,21	0/1:11,0:5:0.02:0,0,0	1/1:12,10:22:4.75:130,5,0	1/1:8,21:30:53.20:526,53,0	1/1:3,11:14:8.83:241,9,0	0/1:23,10:34:45.33:302,0,45	1/1:3,8:11:5.68:40,6,0	1/1:14,11:25:32.85:254,33,0	1/1:16,8:24:10.74:194,11,0	1/1:4,12:16:8.34:240,8,0	1/1:2,7:9:17.58:162,18,0	1/1:4,11:16:4.62:105,5,0	0/1:7,7:14:11.64:51,0,12	0/1:10,4:15:2.44:94,0,2	0/0:35,1:33:22.30:0,22,391	1/1:13,4:16:30.21:234,30,0	1/1:23,9:30:40.52:378,41,0	1/1:10,12:24:1.38:140,1,0	0/0:5,3:8:2.48:0,2,21	1/1:4,8:11:14.97:135,15,0	0/1:6,9:16:23.67:174,0,24	1/1:6,6:12:2.11:176,2,0	1/1:8,11:16:1.20:105,1,0	0/1:16,10:27:14.71:171,0,15	0/1:11,8:17:6.60:98,0,7	1/1:15,1:11:11.92:96,12,0
chr10	93662041	.	GTGCGCGCGCGCGCGCGCACACA	G	2952.88	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=8.194;DP=291;FS=6.104;HRun=0;HaplotypeScore=161.8900;InbreedingCoeff=0.3937;MQ=58.06;MQ0=2;MQRankSum=-7.978;QD=28.12;ReadPosRankSum=6.791;VQSLOD=1.6700;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:6:3.01:156,3,0	1/1:6,0:6:9.03:266,9,0	0/0:10,0:7:13.91:0,14,194	0/0:6,0:6:8.39:0,8,207	0/1:18,0:17:99:248,0,271	0/0:12,0:12:9.01:0,9,102	0/0:12,0:11:12.04:0,12,422	0/0:9,0:9:24.07:0,24,650	1/1:5,0:5:9.03:221,9,0	0/1:14,0:14:99:503,0,437	0/1:12,0:12:99:148,0,231	0/0:9,0:9:15.05:0,15,592	0/0:8,0:8:15.05:0,15,533	0/0:6,0:6:9.01:0,9,83	1/1:1,0:1:3.01:78,3,0	1/1:7,0:7:6.02:140,6,0	1/1:5,0:4:3.01:136,3,0	0/1:10,0:10:52.50:384,0,53	0/0:13,0:13:39.12:0,39,1458	0/0:14,0:14:14.01:0,14,530	0/0:11,0:11:15.05:0,15,887	0/0:14,0:13:16.28:0,16,189	0/0:21,0:21:30.07:0,30,642	0/0:20,0:20:21.04:0,21,616	0/1:17,0:17:99:775,0,188	0/0:10,0:10:24.08:0,24,1392	0/0:11,0:11:24.08:0,24,1374	1/1:4,0:4:3.01:72,3,0
chr10	93662042	.	TGCGCGC	T	2285.50	PASS	AB=0.945;AC=33;AF=0.589;AN=56;BaseQRankSum=4.506;DP=287;FS=3.412;HRun=0;HaplotypeScore=105.5635;InbreedingCoeff=0.4313;MQ=57.09;MQ0=2;MQRankSum=-1.860;QD=12.03;ReadPosRankSum=5.009;VQSLOD=2.0734;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:3.01:42,3,0	1/1:6,0:6:9.03:144,9,0	0/1:8,0:5:0:0,0,0	0/0:5,0:5:3.01:0,3,52	1/1:18,0:17:9.03:153,9,0	0/0:10,2:11:3:0,3,30	1/1:9,4:13:6:74,6,0	1/1:6,3:9:9.91:143,10,0	1/1:5,0:5:9.03:144,9,0	1/1:13,0:14:27.07:437,27,0	1/1:11,0:11:6.02:92,6,0	0/1:8,1:9:10.67:53,0,11	0/0:7,0:7:5.92:0,6,38	0/1:6,0:6:18.96:19,0,49	1/1:1,0:1:3.01:51,3,0	1/1:7,0:7:6.02:94,6,0	1/1:5,0:4:3.01:42,3,0	1/1:10,0:10:18.06:307,18,0	0/0:12,0:12:19.42:0,19,192	0/0:14,0:14:10.49:0,10,96	0/0:12,0:12:11.43:0,11,123	0/0:12,2:13:10.26:0,10,92	0/1:20,1:21:49.98:50,0,104	0/1:17,1:20:13.73:120,0,14	1/1:17,0:17:27.09:449,27,0	0/0:10,0:10:14.51:0,15,221	0/0:11,0:11:11.97:0,12,187	1/1:4,0:4:3.01:51,3,0
chr10	93662051	.	GCGCGCGCACACACACACACACA	G	7128.85	PASS	AB=1.000;AC=28;AF=0.519;AN=54;BaseQRankSum=1.370;DP=244;FS=4.746;HRun=0;HaplotypeScore=109.8157;InbreedingCoeff=0.5702;MQ=46.05;MQ0=3;MQRankSum=-3.784;QD=59.91;ReadPosRankSum=5.592;VQSLOD=3.2908;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:3.01:47,3,0	1/1:1,5:6:9.03:536,9,0	./.	0/0:3,0:2:3:0,3,52	1/1:2,9:10:9.03:556,9,0	0/0:10,0:9:3:0,3,30	0/1:12,0:11:16.98:17,0,32	1/1:8,0:8:1.82:131,2,0	1/1:0,5:5:9.03:546,9,0	1/1:2,10:12:27.07:1376,27,0	1/1:1,8:9:6.02:360,6,0	0/1:8,0:8:15.97:16,0,385	0/0:5,0:5:6.02:0,6,448	0/0:6,0:6:9.02:0,9,188	1/1:0,1:1:3.01:185,3,0	1/1:0,6:6:6.02:362,6,0	1/1:4,0:3:3.01:42,3,0	1/1:1,9:9:18.06:1112,18,0	0/0:7,0:7:20.50:0,21,967	0/0:13,0:13:10.95:0,11,289	0/0:11,0:11:11.78:0,12,558	0/0:11,0:10:10.26:0,10,92	0/0:16,0:16:15.03:0,15,221	0/0:15,0:15:12:0,12,317	1/1:1,15:16:27.09:1656,27,0	0/0:11,0:11:26.12:0,26,1565	0/0:12,0:12:11.81:0,12,689	1/1:1,3:4:3.01:185,3,0
chr10	93662055	.	G	GCACACA	888.73	PASS	AC=16;AF=0.320;AN=50;BaseQRankSum=-5.017;DP=228;FS=0.000;HRun=0;HaplotypeScore=93.4604;InbreedingCoeff=0.4955;MQ=45.69;MQ0=5;MQRankSum=1.726;QD=13.89;ReadPosRankSum=-2.814;VQSLOD=1.5163;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:1.55:0,2,4	0/0:6,0:6:9.03:0,9,125	./.	0/0:4,0:2:3.01:0,3,38	0/0:10,0:9:9.03:0,9,125	./.	0/0:9,0:8:0.47:0,0,1	1/1:7,0:6:2.36:19,2,0	0/0:5,0:5:9.03:0,9,114	0/0:11,0:11:20.56:0,21,259	0/0:8,0:8:5.93:0,6,59	1/1:7,0:7:2.52:72,3,0	1/1:4,0:4:6.02:147,6,0	1/1:6,0:6:3.01:57,3,0	0/0:1,0:1:3.01:0,3,42	0/0:6,0:6:6.02:0,6,72	0/0:4,0:3:1.55:0,2,4	0/0:10,0:9:18.06:0,18,252	1/1:3,3:7:14.75:312,15,0	0/0:10,0:11:0:0,0,0	1/1:12,0:11:2.16:22,2,0	./.	0/0:15,0:15:2.22:0,2,7	0/0:14,0:14:3.40:0,3,11	0/0:15,0:15:27.03:0,27,332	1/1:4,0:11:1.69:208,2,0	1/1:2,7:10:5.27:191,5,0	0/0:4,0:4:3.01:0,3,42
chr10	93662057	.	G	GCACACA	1000.88	PASS	AB=1.000;AC=17;AF=0.405;AN=42;BaseQRankSum=-4.709;DP=235;FS=16.416;HRun=0;HaplotypeScore=102.4920;InbreedingCoeff=0.6010;MQ=42.05;MQ0=6;MQRankSum=0.503;QD=12.51;ReadPosRankSum=-2.275;VQSLOD=0.6363;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:6:9.03:0,9,125	./.	./.	0/0:10,0:9:9.03:0,9,126	./.	./.	0/1:7,0:6:0:0,0,0	0/0:5,0:5:9.03:0,9,125	0/0:11,0:11:21:0,21,269	0/0:8,0:8:6.02:0,6,75	1/1:8,0:8:7.81:100,8,0	1/1:4,0:4:6.02:145,6,0	1/1:6,0:6:3.01:55,3,0	0/0:1,0:1:3.01:0,3,42	0/0:6,0:6:6.02:0,6,83	./.	0/0:10,0:9:18.06:0,18,251	1/1:5,0:5:9.03:267,9,0	0/0:8,4:13:2.22:0,2,7	1/1:12,0:12:2.96:19,3,0	./.	0/0:16,0:16:2.04:0,2,6	1/1:15,0:14:2.43:9,2,0	0/0:15,0:15:27.09:0,27,361	1/1:13,0:13:24.32:355,24,0	1/1:9,0:9:5.97:194,6,0	0/0:4,0:4:3.01:0,3,42
chr10	93662067	.	A	ATTG	181.54	PASS	AB=0.881;AC=7;AF=0.125;AN=56;BaseQRankSum=-1.520;DP=251;FS=6.903;HRun=0;HaplotypeScore=95.8293;InbreedingCoeff=0.1499;MQ=34.10;MQ0=9;MQRankSum=-2.565;QD=3.13;ReadPosRankSum=-3.572;VQSLOD=0.2637;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:6.63:0,7,34	0/0:6,0:6:8.93:0,9,63	0/0:3,0:1:3.01:0,3,55	0/0:9,0:3:3.01:0,3,56	0/0:10,0:9:8.93:0,9,63	1/1:12,0:11:0.20:8,0,0	0/0:11,0:10:3.01:0,3,55	0/0:3,0:2:6.02:0,6,84	0/0:5,0:5:8.94:0,9,65	0/0:11,0:11:19.57:0,20,130	0/0:8,0:8:5.96:0,6,44	0/0:8,0:8:6.02:0,6,91	0/0:5,0:5:6.02:0,6,67	0/1:5,0:5:15.37:15,0,46	0/0:1,0:1:2.98:0,3,21	0/0:6,0:6:5.96:0,6,44	0/1:4,5:8:2.64:205,0,3	0/0:10,0:9:17.85:0,18,125	0/0:4,0:4:12.04:0,12,172	0/0:13,0:12:3.75:0,4,58	0/0:13,0:12:14.08:0,14,219	1/1:12,0:11:7.55:34,8,0	0/1:20,0:20:33.84:34,0,45	0/0:14,0:13:0.38:0,0,166	0/0:15,0:15:26.79:0,27,191	0/0:13,0:13:31.34:0,31,490	0/0:9,0:9:10.56:0,11,115	0/0:3,0:3:2.98:0,3,21
chr10	93662074	.	C	CACACACAT	944.42	PASS	AB=1.000;AC=15;AF=0.288;AN=52;BaseQRankSum=1.064;DP=308;FS=5.294;HRun=0;HaplotypeScore=183.6345;InbreedingCoeff=0.2791;MQ=33.63;MQ0=10;MQRankSum=0.715;QD=9.26;ReadPosRankSum=-2.406;VQSLOD=2.1947;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:11:2.78:11,0,3	0/0:9,0:9:1.42:0,1,160	0/0:5,0:2:5.95:0,6,43	0/0:8,0:3:5.93:0,6,45	0/0:19,0:18:3.42:0,3,176	./.	./.	0/0:6,0:5:11.89:0,12,82	0/1:8,0:8:2.13:2,0,162	0/0:15,0:15:31.99:0,32,466	0/1:14,0:14:0.01:0,0,98	1/1:8,1:9:8.60:162,9,0	1/1:1,4:7:6.02:258,6,0	1/1:0,5:6:3.01:92,3,0	0/0:2,0:2:3.01:0,3,59	0/0:9,0:9:7.67:0,8,118	0/0:11,0:10:6.77:0,7,50	0/0:14,0:13:20:0,20,438	0/1:7,0:7:31.42:190,0,31	0/0:12,0:11:1.20:0,1,21	0/0:12,0:11:9.38:0,9,64	0/0:3,9:14:1.25:0,1,3	0/0:7,14:21:1.60:0,2,5	1/1:5,9:14:2.77:13,3,0	0/0:19,0:19:20.44:0,20,482	0/1:15,0:15:83.73:234,0,84	1/1:9,0:9:6.32:121,6,0	0/0:3,0:3:3.01:0,3,59
chr10	93662258	.	AC	A	11390.74	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=6.687;DP=749;FS=25.281;HRun=4;HaplotypeScore=110.6858;InbreedingCoeff=0.9997;MQ=82.69;MQ0=0;MQRankSum=-4.928;QD=32.27;ReadPosRankSum=2.886;VQSLOD=2.9424;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,49:50:99:1623,138,0	0/0:8,0:8:24.08:0,24,336	0/0:26,0:26:66.19:0,66,894	0/0:33,0:33:87.20:0,87,1119	0/0:36,0:36:99:0,105,1383	1/1:1,17:18:48.15:575,48,0	1/1:1,27:28:81.15:935,81,0	0/0:23,0:23:69.22:0,69,951	0/0:38,0:38:99:0,114,1547	0/0:33,0:33:99:0,99,1385	0/0:21,0:21:57.19:0,57,796	1/1:1,24:25:66.17:776,66,0	1/1:0,19:19:51.16:612,51,0	1/1:3,24:27:72.22:862,72,0	0/0:39,0:39:99:0,114,1524	0/0:26,0:26:72.15:0,72,963	0/0:39,0:39:99:0,111,1513	0/0:24,0:24:72.23:0,72,989	1/1:0,25:25:75.23:900,75,0	1/1:0,12:11:33.03:377,33,0	1/1:2,41:43:99:1315,111,0	1/1:2,15:17:36.11:431,36,0	1/1:0,18:18:48.15:575,48,0	1/1:0,26:26:69.21:827,69,0	0/0:22,0:22:54.07:0,54,675	1/1:0,24:24:72.22:862,72,0	1/1:0,21:21:60.18:719,60,0	0/0:28,0:28:84.24:0,84,1154
chr10	93662881	.	TA	T	4638.30	PASS	AB=0.800;AC=27;AF=0.482;AN=56;BaseQRankSum=12.336;DP=492;FS=0.750;HRun=9;HaplotypeScore=48.6311;InbreedingCoeff=0.9150;MQ=56.12;MQ0=13;MQRankSum=0.503;QD=21.57;ReadPosRankSum=3.149;VQSLOD=5.4516;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:90.24:0,90,1017	0/0:8,0:8:21.05:0,21,233	0/1:3,1:3:18.43:18,0,60	0/0:5,0:4:8.89:0,9,84	0/0:33,0:33:87.24:0,87,985	1/1:0,14:14:39.02:357,39,0	1/1:2,12:14:36.02:329,36,0	0/0:34,0:33:93.27:0,93,1065	0/0:23,0:23:63.18:0,63,717	0/0:17,0:17:42.12:0,42,485	0/0:19,1:20:26.72:0,27,548	1/1:4,26:28:66.03:604,66,0	1/1:2,12:12:33.02:302,33,0	1/1:2,14:15:36.02:329,36,0	0/0:19,0:18:48.13:0,48,544	0/0:16,0:15:39.10:0,39,441	0/0:30,0:29:72.12:0,72,800	0/0:6,0:5:12.04:0,12,138	1/1:5,14:16:35.98:319,36,0	1/1:3,14:17:39.02:357,39,0	1/1:0,9:9:27.01:247,27,0	1/1:1,7:8:21.01:192,21,0	1/1:1,13:14:29.95:274,30,0	1/1:0,7:7:21.01:192,21,0	0/0:18,0:18:51.10:0,51,565	1/1:3,17:20:51:458,51,0	1/1:3,26:29:72.03:659,72,0	0/0:16,0:16:45.13:0,45,519
chr10	93663749	.	GA	G	5165.52	PASS	AB=0.633;AC=46;AF=0.821;AN=56;BaseQRankSum=0.223;DP=491;FS=4.183;HRun=12;HaplotypeScore=71.9546;InbreedingCoeff=0.6846;MQ=48.46;MQ0=10;MQRankSum=2.902;QD=12.60;ReadPosRankSum=1.770;VQSLOD=5.1105;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:35:60.02:0,60,327	1/1:4,3:8:10.98:75,11,0	0/0:4,0:1:1.82:0,2,5	0/0:8,1:2:3.88:0,4,27	1/1:8,26:35:57.75:428,58,0	1/1:3,15:18:44.79:348,45,0	1/1:7,19:25:35.86:278,36,0	1/1:5,8:10:21.95:145,22,0	1/1:2,8:10:20.90:162,21,0	1/1:7,11:19:31.82:233,32,0	0/1:8,6:13:18.50:58,0,19	1/1:5,10:13:20.85:162,21,0	1/1:2,13:14:20.89:162,21,0	1/1:5,14:19:32.76:255,33,0	1/1:4,8:10:17.92:139,18,0	1/1:3,8:11:14.43:100,14,0	0/0:11,0:28:40.13:0,40,235	1/1:12,18:27:32.77:255,33,0	1/1:3,11:12:23.83:185,24,0	1/1:6,13:19:32.75:253,33,0	1/1:0,11:11:26.89:209,27,0	1/1:6,15:20:35.82:278,36,0	1/1:2,13:13:26.90:209,27,0	1/1:3,19:20:53.79:418,54,0	0/1:3,8:13:0.35:125,0,0	1/1:5,20:25:50.48:388,50,0	1/1:7,8:15:23.82:185,24,0	1/1:2,4:6:14.94:116,15,0
chr10	93663875	.	TGTGTGTGTGTGTGTA	T	4700.74	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=2.087;DP=481;FS=21.623;HRun=0;HaplotypeScore=149.5488;InbreedingCoeff=0.0481;MQ=53.35;MQ0=12;MQRankSum=2.260;QD=11.55;ReadPosRankSum=-1.439;VQSLOD=1.6304;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:29:99:174,0,558	1/1:3,0:3:6.02:98,6,0	0/0:27,0:12:27.05:0,27,415	0/0:31,0:12:26.80:0,27,391	1/1:8,11:19:6.48:264,6,0	1/1:12,0:11:16.61:253,17,0	1/1:17,0:15:12.51:166,13,0	0/1:17,0:13:99:254,0,165	1/1:6,13:18:5.91:149,6,0	0/1:14,0:14:6.24:328,0,6	1/1:14,0:14:15.05:294,15,0	1/1:11,1:11:3.90:134,4,0	1/1:8,1:9:6.02:174,6,0	1/1:9,0:9:6.02:147,6,0	1/1:4,6:9:2.91:132,3,0	1/1:9,0:8:9.03:124,9,0	0/1:22,0:20:34.88:35,0,536	1/1:29,0:25:14.10:478,14,0	0/1:11,0:9:67.25:67,0,248	0/1:20,0:20:99:123,0,995	0/1:32,0:30:99:115,0,939	1/1:5,11:16:3.01:77,3,0	1/1:15,0:15:18.06:248,18,0	1/1:25,0:22:35.93:518,36,0	1/1:6,13:19:3.91:164,4,0	0/1:17,0:16:99:162,0,707	0/0:15,0:15:12.51:0,13,256	0/1:6,0:6:23.27:23,0,300
chr10	93663883	.	TGTGTGTA	T	5583.35	PASS	AB=0.976;AC=48;AF=0.857;AN=56;BaseQRankSum=1.309;DP=394;FS=6.280;HRun=0;HaplotypeScore=84.1565;InbreedingCoeff=0.2035;MQ=57.38;MQ0=12;MQRankSum=-0.162;QD=16.97;ReadPosRankSum=3.644;VQSLOD=2.8924;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:27:65.68:336,0,66	1/1:1,0:1:3.01:41,3,0	0/0:28,0:12:33.10:0,33,500	0/0:37,0:17:40.65:0,41,574	1/1:12,0:12:6.49:115,6,0	1/1:10,0:9:15.05:207,15,0	1/1:8,0:6:12.04:166,12,0	1/1:15,0:11:30.08:395,30,0	1/1:16,0:15:9.03:133,9,0	1/1:9,0:9:27.09:372,27,0	1/1:9,0:9:15.05:207,15,0	1/1:7,0:6:2.93:57,3,0	1/1:3,0:3:6.02:99,6,0	1/1:6,0:6:12.04:166,12,0	1/1:7,0:6:3.01:58,3,0	1/1:7,0:6:12.04:166,12,0	0/1:22,1:21:24.07:235,0,24	1/1:23,0:19:34.81:495,35,0	1/1:12,0:10:1.14:190,1,0	0/1:17,1:18:99:193,0,139	0/1:28,0:26:8.72:392,0,9	1/1:11,0:11:3.01:41,3,0	1/1:9,0:9:21.07:290,21,0	1/1:18,0:15:30.10:430,30,0	1/1:16,0:16:4.18:96,4,0	1/1:18,0:17:32.18:453,32,0	1/1:6,4:10:2.74:76,3,0	1/1:4,0:4:12.04:176,12,0
chr10	93663885	.	TGTGTA	T	5990.79	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.400;DP=394;FS=1.745;HRun=0;HaplotypeScore=75.3718;InbreedingCoeff=0.5146;MQ=60.30;MQ0=11;MQRankSum=-1.874;QD=18.32;ReadPosRankSum=3.192;VQSLOD=4.0981;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:25:22.84:403,23,0	1/1:1,0:1:3.01:41,3,0	0/0:28,0:12:33.10:0,33,500	0/0:39,0:19:43.39:0,43,622	1/1:12,0:12:5.97:86,6,0	1/1:11,0:10:15.05:207,15,0	1/1:9,0:7:12.04:166,12,0	1/1:16,0:12:36.10:478,36,0	1/1:16,0:15:9.03:119,9,0	1/1:9,0:9:27.09:372,27,0	1/1:9,0:9:15.05:207,15,0	1/1:7,0:6:2.92:43,3,0	1/1:3,0:3:6.02:85,6,0	1/1:6,0:6:12.04:166,12,0	1/1:7,0:6:3.01:44,3,0	1/1:7,0:6:12.04:166,12,0	1/1:23,0:21:15.10:246,15,0	1/1:26,0:22:40.38:540,40,0	1/1:2,10:10:21.03:254,21,0	1/1:15,1:16:10.64:339,11,0	1/1:28,0:27:41.33:578,41,0	1/1:11,0:11:3.01:41,3,0	1/1:9,0:9:21.07:290,21,0	1/1:17,0:14:30.09:416,30,0	1/1:16,0:16:3.88:82,4,0	1/1:18,0:17:33.11:455,33,0	1/1:7,0:7:3.01:44,3,0	1/1:4,0:4:9.03:124,9,0
chr10	93663889	.	TA	T	6021.20	PASS	AB=0.619;AC=50;AF=0.893;AN=56;BaseQRankSum=1.422;DP=390;FS=0.730;HRun=1;HaplotypeScore=59.4795;InbreedingCoeff=0.3689;MQ=64.74;MQ0=9;MQRankSum=-1.645;QD=18.82;ReadPosRankSum=5.423;VQSLOD=5.1446;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:37.01:496,37,0	1/1:0,1:1:3.01:41,3,0	0/0:29,0:13:36.11:0,36,547	0/0:41,0:21:50.79:0,51,716	1/1:12,0:12:5.73:30,6,0	1/1:1,10:10:15.05:206,15,0	1/1:1,8:7:12.04:165,12,0	1/1:2,15:14:42.07:538,42,0	1/1:14,2:15:8.92:88,9,0	1/1:1,10:11:30.09:397,30,0	1/1:2,8:10:15.05:206,15,0	1/1:2,5:6:2.90:16,3,0	1/1:2,2:4:8.92:98,9,0	1/1:0,6:6:12.04:163,12,0	1/1:6,0:6:2.90:16,3,0	1/1:0,7:6:12.04:165,12,0	1/1:5,13:17:20.05:262,20,0	1/1:6,20:22:42.53:564,43,0	1/1:12,0:10:17.98:249,18,0	0/1:8,8:16:65.06:271,0,65	1/1:2,22:23:44.85:618,45,0	1/1:11,0:11:3.01:41,3,0	1/1:1,9:10:21.07:289,21,0	1/1:1,17:16:32.97:428,33,0	1/1:15,1:16:4.04:53,4,0	1/1:5,12:16:24.82:474,25,0	1/1:5,0:5:3.01:34,3,0	0/1:1,3:4:17.34:112,0,17
chr10	93664104	.	A	ACCTTCATT	20705.10	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-8.105;DP=644;FS=5.273;HRun=0;HaplotypeScore=153.6104;InbreedingCoeff=0.9977;MQ=84.02;MQ0=0;MQRankSum=-16.178;QD=75.84;ReadPosRankSum=-2.272;VQSLOD=4.2692;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,99,2533	0/0:12,0:12:21.07:0,21,554	0/0:29,0:29:66.21:0,66,1643	0/0:20,0:20:41.14:0,41,934	0/0:35,0:35:81.28:0,81,2053	1/1:11,13:24:45.11:1715,45,0	1/1:7,11:18:39.13:1473,39,0	0/0:44,0:44:96.20:0,96,2333	0/0:26,0:26:63.22:0,63,1628	0/0:22,0:22:57.19:0,57,1449	0/0:16,0:16:27.09:0,27,712	1/1:8,16:26:57.20:2306,57,0	1/1:10,9:20:39.13:1534,39,0	1/1:7,17:24:63.22:2645,63,0	0/0:28,0:28:78.27:0,78,2024	0/0:16,0:16:45.15:0,45,1175	0/0:16,0:16:33.11:0,33,870	0/0:29,0:29:69.21:0,69,1654	1/1:13,11:24:45.15:1499,45,0	1/1:5,6:12:24.08:869,24,0	1/1:5,5:10:18.02:533,18,0	1/1:7,12:20:39.13:1511,39,0	1/1:6,11:17:36.10:1286,36,0	1/1:9,14:23:27.09:1052,27,0	0/0:23,0:23:45.15:0,45,1175	1/1:13,20:33:66.23:2605,66,0	1/1:13,9:22:45.11:1676,45,0	0/0:17,0:17:45.15:0,45,1163
chr10	93664463	.	C	CT	1376.16	PASS	AB=0.684;AC=50;AF=0.926;AN=54;BaseQRankSum=3.011;DP=221;FS=49.656;HRun=0;HaplotypeScore=295.3970;InbreedingCoeff=-0.1348;MQ=89.60;MQ0=0;MQRankSum=-2.586;QD=6.28;ReadPosRankSum=5.256;VQSLOD=1.9533;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,9:11:4.12:14,4,0	1/1:0,5:5:3.44:22,3,0	0/1:10,2:13:64.29:64,0,91	0/1:11,1:13:48.71:49,0,113	1/1:4,14:18:16.47:127,16,0	0/1:1,4:5:4.84:16,0,5	1/1:1,1:2:2.36:8,2,0	1/1:3,0:3:1.24:10,1,0	1/1:2,6:8:0.17:36,0,0	1/1:1,7:8:3.47:77,3,0	1/1:1,10:11:18.33:128,18,0	1/1:0,4:4:5.88:41,6,0	1/1:3,5:8:7.22:44,7,0	1/1:1,7:8:11.41:78,11,0	1/1:2,12:14:0.71:93,1,0	1/1:2,3:5:7.48:36,7,0	1/1:2,1:3:2.99:26,3,0	1/1:0,5:5:8.99:76,9,0	1/1:1,3:4:5.26:45,5,0	0/1:0,7:7:5.99:17,0,6	./.	1/1:2,8:10:13.61:87,14,0	1/1:0,8:8:11.30:47,11,0	1/1:3,6:9:4.16:41,4,0	1/1:1,13:14:13.15:104,13,0	1/1:2,8:10:8.35:71,8,0	1/1:0,8:8:13.93:90,14,0	1/1:1,4:5:3.84:36,4,0
chr10	93664465	.	T	TA	1031.80	PASS	AB=0.652;AC=47;AF=0.904;AN=52;BaseQRankSum=0.239;DP=203;FS=8.277;HRun=1;HaplotypeScore=294.0384;InbreedingCoeff=-0.1391;MQ=87.33;MQ0=0;MQRankSum=-3.065;QD=5.16;ReadPosRankSum=3.255;VQSLOD=0.1112;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:10:4.15:14,4,0	1/1:0,5:5:3.39:18,3,0	0/1:7,2:10:26.53:75,0,27	0/1:9,1:13:50.30:50,0,55	1/1:4,14:18:16.22:85,16,0	0/1:1,4:5:4.87:11,0,5	1/1:0,1:1:2.37:8,2,0	./.	1/1:0,6:6:5.91:40,6,0	1/1:0,7:7:2.16:60,2,0	1/1:1,10:11:17.33:95,17,0	1/1:0,4:4:3.47:28,3,0	1/1:3,4:7:3.78:20,4,0	1/1:2,6:8:11.14:56,11,0	0/1:3,11:14:3.22:74,0,3	1/1:0,3:3:6.67:29,7,0	1/1:2,0:2:3.01:31,3,0	1/1:2,3:5:8.93:71,9,0	1/1:1,3:4:6.79:40,7,0	0/1:0,7:7:6.06:12,0,6	./.	1/1:1,8:9:13.38:68,13,0	1/1:0,8:8:9.45:33,9,0	1/1:1,6:7:0.01:24,0,0	1/1:1,13:14:9.32:48,9,0	1/1:1,8:9:9.77:59,10,0	1/1:0,8:8:9.72:63,10,0	1/1:1,4:5:3.80:28,4,0
chr10	93664468	.	G	GC	1841.03	PASS	AB=0.624;AC=44;AF=0.846;AN=52;BaseQRankSum=3.680;DP=183;FS=33.568;HRun=0;HaplotypeScore=295.6820;InbreedingCoeff=-0.0775;MQ=86.70;MQ0=0;MQRankSum=-3.426;QD=10.23;ReadPosRankSum=5.556;VQSLOD=2.3270;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:4.15:14,4,0	1/1:0,5:5:3.48:34,3,0	0/1:6,0:9:32.71:92,0,33	0/1:8,3:11:48.60:49,0,67	1/1:1,14:15:9.71:100,10,0	0/1:0,4:4:4.76:28,0,5	1/1:0,1:1:2.37:8,2,0	./.	1/1:0,6:6:6.02:68,6,0	1/1:0,7:7:7.45:125,7,0	1/1:1,10:11:15.88:156,16,0	1/1:0,4:4:11.23:86,11,0	1/1:1,4:5:2.93:19,3,0	1/1:0,6:6:8.51:76,9,0	0/1:1,11:12:3.79:128,0,4	1/1:0,3:3:8.41:58,8,0	0/0:2,0:2:0:0,0,0	1/1:2,3:5:5.89:69,6,0	1/1:0,3:3:8.76:78,9,0	0/1:0,7:7:5.95:28,0,6	./.	1/1:0,8:8:13.80:137,14,0	1/1:0,8:8:12.73:84,13,0	0/1:1,6:7:0.49:57,0,0	1/1:1,13:14:10.24:112,10,0	1/1:0,8:8:14.01:124,14,0	1/1:0,8:8:18.08:159,18,0	1/1:0,4:4:6.36:61,6,0
chr10	93664470	.	C	CA	618.29	PASS	AB=0.653;AC=44;AF=0.880;AN=50;BaseQRankSum=0.684;DP=170;FS=8.766;HRun=2;HaplotypeScore=307.0684;InbreedingCoeff=-0.0772;MQ=82.80;MQ0=0;MQRankSum=-0.791;QD=3.66;ReadPosRankSum=2.921;VQSLOD=-0.3505;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:4.15:14,4,0	1/1:0,5:5:3.35:15,3,0	0/1:6,0:6:22.47:22,0,23	0/1:10,1:11:12.12:12,0,40	1/1:0,14:14:10.59:51,11,0	0/1:0,4:4:4.97:8,0,5	1/1:0,1:1:2.37:8,2,0	./.	1/1:0,6:6:5.64:27,6,0	1/1:0,7:7:2.06:53,2,0	1/1:0,10:10:13.49:60,13,0	1/1:0,4:4:1.77:18,2,0	1/1:0,4:4:0.44:1,0,0	1/1:1,5:6:8.09:35,8,0	0/1:0,11:11:7.63:38,0,8	1/1:0,3:3:5.76:24,6,0	./.	1/1:0,3:3:5.87:35,6,0	1/1:0,3:3:7.03:35,7,0	0/1:0,7:7:6.06:12,0,6	./.	1/1:0,8:8:13.06:61,13,0	1/1:0,8:8:8.01:29,8,0	0/1:0,6:6:1.90:10,0,2	1/1:0,13:13:8.89:42,9,0	1/1:0,8:8:10.20:56,10,0	1/1:0,8:8:5.83:45,6,0	1/1:0,4:4:2.26:18,2,0
chr10	93664473	.	G	GT	964.56	PASS	AB=0.648;AC=44;AF=0.880;AN=50;BaseQRankSum=0.921;DP=166;FS=5.366;HRun=0;HaplotypeScore=304.2714;InbreedingCoeff=-0.0469;MQ=73.94;MQ0=0;MQRankSum=-1.275;QD=5.85;ReadPosRankSum=3.198;VQSLOD=2.9343;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:4.15:14,4,0	1/1:0,5:5:3.45:21,3,0	0/1:3,0:5:3.07:3,0,8	0/1:7,1:8:12.07:12,0,48	1/1:0,14:14:11.04:66,11,0	0/1:0,4:4:4.80:14,0,5	1/1:0,1:1:2.37:8,2,0	./.	1/1:0,6:6:5.97:48,6,0	1/1:0,7:7:3.47:75,3,0	1/1:0,10:10:15.19:88,15,0	1/1:0,4:4:5.21:36,5,0	1/1:0,4:4:2.19:7,2,0	1/1:1,5:6:8.41:47,8,0	0/1:0,11:11:4.74:65,0,5	1/1:0,3:3:7.02:33,7,0	./.	1/1:0,3:3:5.99:48,6,0	1/1:0,3:3:8.18:52,8,0	0/1:0,7:7:5.99:17,0,6	./.	1/1:0,8:8:13.63:84,14,0	1/1:0,8:8:9.82:40,10,0	0/1:0,6:6:0.76:42,0,1	1/1:0,13:13:10.14:62,10,0	1/1:0,8:8:11.54:80,12,0	1/1:0,8:8:11.30:79,11,0	1/1:0,4:4:2.94:27,3,0
chr10	93664476	.	G	GT	1766.38	PASS	AB=0.578;AC=43;AF=0.860;AN=50;BaseQRankSum=2.131;DP=164;FS=9.559;HRun=0;HaplotypeScore=300.2365;InbreedingCoeff=-0.0285;MQ=68.90;MQ0=0;MQRankSum=-2.210;QD=11.04;ReadPosRankSum=3.888;VQSLOD=2.8985;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:4.15:14,4,0	1/1:0,5:5:3.48:35,3,0	0/0:3,0:3:0.47:0,0,1	0/1:7,1:8:33.24:33,0,91	1/1:0,14:14:11.27:105,11,0	0/1:0,4:4:4.76:28,0,5	1/1:0,1:1:2.37:8,2,0	./.	1/1:0,6:6:6.02:67,6,0	1/1:0,7:7:7.76:127,8,0	1/1:0,10:10:16.01:154,16,0	1/1:0,4:4:11.18:85,11,0	1/1:0,4:4:2.93:20,3,0	1/1:0,6:6:8.51:74,9,0	0/1:0,11:11:1.76:128,0,2	1/1:0,3:3:8.38:57,8,0	./.	1/1:0,3:3:6.02:71,6,0	1/1:0,3:3:8.92:84,9,0	0/1:0,7:7:5.94:32,0,6	./.	1/1:0,8:8:13.80:135,14,0	1/1:0,8:8:12.72:84,13,0	0/1:0,6:6:0.70:55,0,1	1/1:0,13:13:10.71:112,11,0	1/1:0,8:8:14.34:132,14,0	1/1:0,8:8:17.90:158,18,0	1/1:0,4:4:6.86:65,7,0
chr10	93664479	.	T	TA	2032.91	PASS	AB=0.500;AC=41;AF=0.854;AN=48;BaseQRankSum=2.773;DP=158;FS=13.080;HRun=1;HaplotypeScore=307.2821;InbreedingCoeff=0.2605;MQ=53.44;MQ0=0;MQRankSum=-2.184;QD=13.92;ReadPosRankSum=3.384;VQSLOD=1.0712;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:4.15:14,4,0	1/1:0,5:5:3.48:42,3,0	./.	0/0:5,0:5:9.48:0,9,105	1/1:0,14:14:8.27:84,8,0	0/1:0,4:4:4.76:35,0,5	1/1:0,1:1:2.37:8,2,0	./.	1/1:0,6:6:6.02:82,6,0	1/1:0,7:7:11.40:161,11,0	1/1:0,10:10:16.04:192,16,0	1/1:0,4:4:11.87:116,12,0	1/1:0,4:4:3.46:27,3,0	1/1:0,6:6:8.52:91,9,0	0/1:0,11:11:0.46:165,0,0	1/1:0,3:3:8.49:73,8,0	./.	1/1:0,3:3:6.49:85,6,0	1/1:0,3:3:9:102,9,0	0/1:0,7:7:5.99:16,0,6	./.	1/1:0,8:8:13.81:164,14,0	1/1:0,8:8:10.57:101,11,0	0/0:0,6:6:2.12:0,2,9	1/1:0,13:13:11.68:141,12,0	1/1:0,8:8:17.49:158,17,0	1/1:0,8:8:18.86:204,19,0	1/1:0,4:4:9.39:84,9,0
chr10	93664482	.	T	TA	1195.09	PASS	AB=0.500;AC=41;AF=0.854;AN=48;BaseQRankSum=1.645;DP=156;FS=6.306;HRun=0;HaplotypeScore=309.2297;InbreedingCoeff=0.1959;MQ=45.45;MQ0=0;MQRankSum=-1.029;QD=7.86;ReadPosRankSum=1.217;VQSLOD=2.7771;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:4.15:14,4,0	1/1:0,5:5:3.47:28,3,0	./.	0/0:3,0:3:5.75:0,6,52	0/1:0,14:14:2.36:47,0,2	0/1:0,4:4:4.77:21,0,5	1/1:0,1:1:2.37:8,2,0	./.	1/1:0,6:6:6.01:55,6,0	1/1:0,7:7:4.85:96,5,0	1/1:0,10:10:15.89:121,16,0	1/1:0,4:4:9.11:62,9,0	1/1:0,4:4:2.65:12,3,0	1/1:0,6:6:8.50:63,8,0	0/1:0,11:11:2.91:96,0,3	1/1:0,3:3:7.99:45,8,0	./.	1/1:0,3:3:6.01:56,6,0	1/1:0,3:3:8.60:64,9,0	0/1:0,7:7:1.12:1,0,7	./.	1/1:0,8:8:13.77:110,14,0	1/1:0,8:8:10.19:58,10,0	0/1:0,6:6:1.09:1,0,5	1/1:0,13:13:10.56:86,11,0	1/1:0,8:8:10.98:91,11,0	1/1:0,8:8:16.15:121,16,0	1/1:0,4:4:5.04:48,5,0
chr10	93664484	.	C	CA	2937.94	PASS	AB=0.867;AC=46;AF=0.885;AN=52;BaseQRankSum=-0.479;DP=315;FS=5.330;HRun=0;HaplotypeScore=613.2978;InbreedingCoeff=0.3050;MQ=37.97;MQ0=0;MQRankSum=-1.500;QD=9.60;ReadPosRankSum=-2.776;VQSLOD=1.0850;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,9:12:10.10:60,10,0	1/1:4,5:9:10:52,10,0	./.	0/0:3,0:3:6.01:0,6,78	1/1:12,14:26:11.13:162,11,0	0/1:7,4:11:20.89:43,0,21	1/1:2,1:3:3:12,3,0	./.	1/1:5,6:11:11.60:103,12,0	1/1:16,7:23:23.24:250,23,0	1/1:5,10:15:12.36:129,12,0	1/1:9,4:13:20.42:192,20,0	1/1:8,4:12:25.62:169,26,0	1/1:5,6:11:14.55:116,15,0	1/1:3,11:13:3.48:150,3,0	1/1:5,3:8:22.36:151,22,0	0/1:6,0:6:6.49:59,0,6	1/1:5,3:8:12.99:147,13,0	1/1:2,3:5:14.61:113,15,0	1/1:10,7:17:10.14:110,10,0	1/1:3,1:4:5.93:47,6,0	1/1:6,8:14:18.50:154,18,0	1/1:9,8:17:20.63:112,21,0	0/0:0,6:6:2.23:0,2,9	1/1:12,13:25:21.60:193,22,0	1/1:10,8:18:26.60:230,27,0	1/1:10,8:18:30.51:258,31,0	1/1:2,4:6:0.83:44,1,0
chr10	93664489	.	G	GC	6756.89	PASS	AB=0.519;AC=45;AF=0.865;AN=52;BaseQRankSum=1.521;DP=330;FS=1.142;HRun=1;HaplotypeScore=467.2787;InbreedingCoeff=0.5093;MQ=37.54;MQ0=0;MQRankSum=-1.763;QD=21.38;ReadPosRankSum=0.443;VQSLOD=1.6999;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:8.66:37,9,0	1/1:0,8:9:15.48:181,15,0	./.	0/0:3,0:3:6.01:0,6,77	0/1:2,26:28:2.85:85,0,3	1/1:2,11:13:13.26:260,13,0	1/1:0,3:3:8.29:47,8,0	./.	1/1:0,11:11:20.86:269,21,0	1/1:1,23:24:60.33:870,60,0	1/1:0,15:15:5.33:196,5,0	1/1:0,13:13:33.01:432,33,0	1/1:0,12:12:27.55:370,28,0	1/1:1,11:12:20.56:266,21,0	1/1:0,14:13:8.10:274,8,0	1/1:0,8:8:20.54:252,21,0	1/1:0,6:6:15.05:203,15,0	1/1:0,9:9:24.55:352,25,0	1/1:1,5:5:14.98:190,15,0	1/1:1,17:18:0.03:96,0,0	0/0:0,4:4:2.44:0,2,6	1/1:1,14:15:22.84:311,23,0	1/1:1,17:18:13.59:152,14,0	0/0:0,6:6:2.08:0,2,9	1/1:1,25:26:48.06:573,48,0	1/1:1,18:19:48.68:613,49,0	1/1:1,17:19:42.97:552,43,0	1/1:0,6:6:15.89:176,16,0
chr10	93664504	.	C	CG	9647.46	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=-0.417;DP=369;FS=11.651;HRun=0;HaplotypeScore=483.8621;InbreedingCoeff=0.3607;MQ=31.46;MQ0=1;MQRankSum=-0.483;QD=26.22;ReadPosRankSum=1.683;VQSLOD=0.2752;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:12.21:114,12,0	1/1:0,9:9:12.51:191,13,0	./.	0/0:1,0:1:2.74:0,3,12	1/1:7,27:34:20.78:503,21,0	1/1:0,15:15:19.32:406,19,0	1/1:0,4:4:8.39:102,8,0	1/1:1,4:4:9.03:144,9,0	1/1:0,10:10:18.06:275,18,0	1/1:2,28:29:71.80:1096,72,0	1/1:0,15:15:5.80:205,6,0	1/1:2,13:15:39.08:563,39,0	1/1:0,14:14:28.34:409,28,0	1/1:1,13:14:24.04:340,24,0	1/1:5,11:15:5.03:153,5,0	1/1:1,11:12:32.59:455,33,0	1/1:0,6:6:15.05:230,15,0	1/1:0,9:9:15.90:241,16,0	1/1:1,9:9:24.01:301,24,0	1/1:0,16:16:28.34:429,28,0	1/1:0,3:3:0.54:11,1,0	1/1:1,18:18:31.87:471,32,0	1/1:0,20:20:40.67:572,41,0	1/1:0,5:5:3.43:20,3,0	1/1:2,25:27:49.68:738,50,0	1/1:0,20:20:56.70:769,57,0	1/1:2,17:19:46.37:666,46,0	1/1:0,7:7:19.36:243,19,0
chr10	93664516	.	C	CG	11952.43	PASS	AC=52;AF=1.000;AN=52;BaseQRankSum=-1.495;DP=363;FS=5.392;HRun=0;HaplotypeScore=435.3598;InbreedingCoeff=-0.0229;MQ=28.40;MQ0=1;MQRankSum=-0.704;QD=32.93;ReadPosRankSum=3.131;VQSLOD=1.9285;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:11:14.54:198,15,0	1/1:0,8:8:15.52:238,16,0	./.	./.	1/1:2,29:31:38.56:747,39,0	1/1:1,15:16:42.14:647,42,0	1/1:1,3:3:6.02:95,6,0	1/1:0,7:6:15.05:240,15,0	1/1:1,9:10:12.04:191,12,0	1/1:1,29:29:77.84:1180,78,0	1/1:1,10:11:21.30:324,21,0	1/1:0,14:14:42.14:650,42,0	1/1:2,16:19:45.62:684,46,0	1/1:2,17:19:45.10:624,45,0	1/1:1,14:14:27.45:430,27,0	1/1:1,12:12:35.60:497,36,0	1/1:0,6:6:15.05:230,15,0	1/1:0,7:7:18.06:287,18,0	1/1:1,6:7:15.44:186,15,0	1/1:1,18:19:34.35:506,34,0	1/1:0,2:2:1.74:45,2,0	1/1:0,19:18:43.03:667,43,0	1/1:0,20:20:49.72:761,50,0	1/1:0,3:3:3.48:49,3,0	1/1:0,25:25:57.55:829,58,0	1/1:1,20:21:59.71:805,60,0	1/1:3,17:20:43.38:648,43,0	1/1:0,6:6:16.45:196,16,0
chr10	93664532	.	G	GT	12217.79	PASS	AB=0.800;AC=52;AF=0.963;AN=54;BaseQRankSum=-2.808;DP=366;FS=14.474;HRun=2;HaplotypeScore=364.3686;InbreedingCoeff=0.1845;MQ=36.40;MQ0=1;MQRankSum=-0.422;QD=33.38;ReadPosRankSum=4.610;VQSLOD=-0.3015;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,7:9:17.99:233,18,0	1/1:1,6:7:18.06:258,18,0	./.	0/1:3,0:3:10.15:10,0,29	1/1:4,28:32:73.50:1004,74,0	1/1:1,16:17:48.09:663,48,0	0/1:2,4:5:2.89:93,0,3	1/1:1,7:7:18.06:259,18,0	1/1:1,7:8:21:260,21,0	1/1:7,23:30:62.94:991,63,0	1/1:6,11:17:32.22:429,32,0	1/1:1,16:17:51.11:681,51,0	1/1:0,18:18:51.17:707,51,0	1/1:3,15:18:48.16:671,48,0	1/1:2,12:13:22.79:460,23,0	1/1:0,12:12:36.12:512,36,0	1/1:0,5:5:12.04:162,12,0	1/1:0,5:5:12.04:172,12,0	1/1:2,4:5:9.03:129,9,0	1/1:2,14:16:33.99:469,34,0	1/1:0,1:1:3.01:43,3,0	1/1:3,20:22:50.54:712,51,0	1/1:2,15:17:45.13:604,45,0	1/1:2,1:3:0.47:1,0,0	1/1:6,18:24:54.65:774,55,0	1/1:1,18:19:54.18:775,54,0	1/1:3,21:24:69.14:931,69,0	1/1:1,5:6:15.05:215,15,0
chr10	93664544	.	C	CA	11664.19	PASS	AB=1.000;AC=51;AF=0.981;AN=52;BaseQRankSum=1.767;DP=288;FS=6.512;HRun=0;HaplotypeScore=276.8166;InbreedingCoeff=0.3151;MQ=48.54;MQ0=0;MQRankSum=-2.403;QD=40.64;ReadPosRankSum=0.558;VQSLOD=3.0846;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:24.08:355,24,0	1/1:0,6:6:18.06:269,18,0	1/1:2,0:3:3.01:36,3,0	0/1:4,0:4:1.18:1,0,42	1/1:0,24:24:66.21:936,66,0	1/1:0,16:16:48.16:714,48,0	1/1:0,8:7:21.07:310,21,0	1/1:0,3:4:9.03:140,9,0	1/1:0,5:5:12.04:181,12,0	1/1:0,21:21:57.19:855,57,0	1/1:0,13:13:39.13:571,39,0	1/1:0,13:13:39.13:579,39,0	1/1:0,15:15:42.14:625,42,0	1/1:1,11:12:36.12:502,36,0	1/1:0,12:11:33.11:490,33,0	1/1:0,13:12:36.12:536,36,0	1/1:0,4:4:6.02:89,6,0	1/1:0,4:4:12.04:183,12,0	1/1:1,2:2:6.01:71,6,0	1/1:0,9:9:24.08:360,24,0	./.	1/1:0,21:21:57.19:841,57,0	1/1:0,12:12:36.12:531,36,0	./.	1/1:0,17:17:51.17:763,51,0	1/1:0,14:14:42.14:643,42,0	1/1:0,20:20:60.20:899,60,0	1/1:0,4:4:12.04:185,12,0
chr10	93664546	.	A	AT	10719.81	PASS	AB=0.500;AC=51;AF=0.944;AN=54;BaseQRankSum=1.825;DP=323;FS=6.561;HRun=1;HaplotypeScore=313.9911;InbreedingCoeff=0.5785;MQ=46.78;MQ0=0;MQRankSum=-2.414;QD=33.71;ReadPosRankSum=0.699;VQSLOD=3.1717;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:10:21.54:286,22,0	1/1:2,5:7:18.50:228,18,0	1/1:4,0:3:5.54:25,6,0	0/0:4,0:4:4.58:0,5,44	1/1:2,24:26:64.07:820,64,0	1/1:0,16:16:48.16:647,48,0	1/1:0,8:7:21.07:279,21,0	1/1:4,3:7:15.05:208,15,0	1/1:2,5:7:18:215,18,0	1/1:2,21:23:60.16:812,60,0	1/1:2,13:15:39.12:507,39,0	1/1:2,13:15:39.13:524,39,0	1/1:1,15:16:42.14:567,42,0	1/1:0,11:12:36.10:450,36,0	1/1:3,11:13:32.97:400,33,0	1/1:2,12:13:36.07:472,36,0	1/1:1,4:5:6.02:82,6,0	1/1:0,4:4:12.04:171,12,0	1/1:1,3:3:6.02:75,6,0	1/1:0,9:9:27.05:345,27,0	./.	1/1:1,21:22:57.19:756,57,0	1/1:3,12:15:42.01:491,42,0	0/1:0,1:1:0:0,0,0	1/1:4,16:20:46.05:590,46,0	1/1:2,14:16:48.16:664,48,0	1/1:3,19:22:66.21:876,66,0	1/1:2,4:6:18.02:231,18,0
chr10	93664553	.	C	CG	13793.59	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=1.452;DP=347;FS=0.000;HRun=0;HaplotypeScore=305.9898;InbreedingCoeff=0.5609;MQ=45.78;MQ0=0;MQRankSum=-2.417;QD=40.45;ReadPosRankSum=0.364;VQSLOD=3.3342;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:24.08:380,24,0	1/1:2,5:7:15.05:238,15,0	1/1:3,2:4:9.65:109,10,0	0/0:5,1:4:3.19:0,3,40	1/1:0,26:26:63.21:977,63,0	1/1:0,16:16:48.16:759,48,0	1/1:1,10:10:30.06:442,30,0	1/1:1,5:6:18.05:263,18,0	1/1:2,7:9:18.06:282,18,0	1/1:1,23:24:66.22:1041,66,0	1/1:1,16:17:45.15:691,45,0	1/1:2,16:18:48.16:756,48,0	1/1:1,16:17:45.15:698,45,0	1/1:3,14:17:45.15:704,45,0	1/1:0,12:11:33.11:520,33,0	1/1:1,12:12:33.11:522,33,0	1/1:0,5:5:12.04:189,12,0	1/1:0,4:4:12.04:191,12,0	1/1:2,7:8:21.01:261,21,0	1/1:1,10:11:30.10:473,30,0	./.	1/1:2,23:25:60.20:941,60,0	1/1:0,15:15:36.12:567,36,0	1/1:0,1:1:3.01:45,3,0	1/1:3,16:19:45.15:712,45,0	1/1:0,16:16:48.16:753,48,0	1/1:0,22:22:66.22:1042,66,0	1/1:0,5:5:15.05:239,15,0
chr10	93664612	.	A	AG	5302.36	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-1.140;DP=337;FS=9.792;HRun=1;HaplotypeScore=242.0513;InbreedingCoeff=-0.1205;MQ=39.83;MQ0=0;MQRankSum=2.716;QD=15.73;ReadPosRankSum=7.877;VQSLOD=3.7225;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:5.84:122,6,0	1/1:13,1:14:14.89:218,15,0	0/1:4,0:2:3.84:4,0,33	0/1:7,0:5:15.13:15,0,62	1/1:21,0:21:44.78:340,45,0	1/1:10,0:10:10.93:185,11,0	0/1:13,0:12:2.03:191,0,2	1/1:11,0:9:20.77:142,21,0	1/1:18,0:18:50.78:387,51,0	1/1:21,0:21:19.58:332,20,0	0/1:17,0:17:5.05:218,0,5	1/1:9,0:9:3:140,3,0	0/1:11,0:11:6.98:174,0,7	0/1:11,0:11:8.97:169,0,9	1/1:9,0:9:26.90:208,27,0	1/1:9,0:9:17.90:133,18,0	1/1:3,0:3:8.93:64,9,0	1/1:3,0:3:8.93:64,9,0	0/1:8,0:8:19.94:102,0,20	1/1:25,0:25:59.26:431,59,0	1/1:2,0:2:5.98:47,6,0	1/1:21,2:23:39.81:443,40,0	1/1:13,1:13:9.93:182,10,0	1/1:6,0:6:11.88:96,12,0	1/1:22,1:23:24.81:400,25,0	0/1:12,0:12:5.09:166,0,5	1/1:16,0:15:17.71:232,18,0	0/1:8,0:8:16.07:96,0,16
chr10	93664613	.	G	GT	10679.62	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.186;DP=352;FS=0.000;HRun=4;HaplotypeScore=236.3764;InbreedingCoeff=0.5556;MQ=39.43;MQ0=0;MQRankSum=-2.413;QD=31.32;ReadPosRankSum=0.623;VQSLOD=2.7507;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,7:12:21.03:265,21,0	1/1:3,12:15:39.02:465,39,0	0/0:3,0:2:0.24:0,0,24	0/0:6,1:5:0.74:0,1,25	1/1:2,20:22:48.12:634,48,0	1/1:3,9:12:27.09:368,27,0	1/1:1,12:12:30.10:409,30,0	1/1:1,10:9:21.07:287,21,0	1/1:1,17:18:51.17:696,51,0	1/1:4,18:22:56.86:774,57,0	1/1:5,13:18:36.12:491,36,0	1/1:3,7:10:24.04:306,24,0	1/1:2,9:11:27.09:368,27,0	1/1:1,10:11:27.09:368,27,0	1/1:0,9:9:27.09:368,27,0	1/1:2,6:8:18.06:246,18,0	1/1:0,3:3:9.03:123,9,0	1/1:1,3:4:9.03:123,9,0	1/1:2,6:8:18.06:246,18,0	1/1:4,22:26:63.64:840,64,0	1/1:0,2:2:6.02:82,6,0	1/1:5,18:23:57.19:768,57,0	1/1:4,12:15:30.06:388,30,0	1/1:0,6:6:11.95:163,12,0	1/1:4,20:24:57.19:776,57,0	1/1:4,9:13:30.08:393,30,0	1/1:3,13:15:36.12:487,36,0	1/1:0,8:8:18.06:246,18,0
chr10	93664625	.	C	CT	12170.61	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.922;DP=337;FS=0.000;HRun=3;HaplotypeScore=212.5665;InbreedingCoeff=0.6939;MQ=37.63;MQ0=0;MQRankSum=-2.983;QD=36.55;ReadPosRankSum=1.520;VQSLOD=3.7487;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:16:33.08:449,33,0	1/1:2,9:11:30.10:416,30,0	0/0:2,0:2:6.02:0,6,76	0/0:1,1:1:2.37:0,2,8	1/1:3,20:23:57.14:762,57,0	1/1:1,10:11:30.10:433,30,0	1/1:3,12:14:33.11:467,33,0	1/1:2,9:9:18.06:269,18,0	1/1:2,17:19:48.16:685,48,0	1/1:2,22:24:72.20:1019,72,0	1/1:3,13:16:44.91:526,45,0	1/1:1,8:9:24.08:350,24,0	1/1:0,9:9:27.09:373,27,0	1/1:0,10:10:30.10:420,30,0	1/1:1,10:11:30.10:424,30,0	1/1:1,5:6:15.05:215,15,0	1/1:1,3:4:9.03:133,9,0	1/1:1,5:6:15.05:215,15,0	1/1:1,6:7:21.07:298,21,0	1/1:1,26:27:72.10:961,72,0	1/1:0,3:3:3.01:42,3,0	1/1:1,14:15:42.14:586,42,0	1/1:0,16:15:45.06:585,45,0	1/1:1,7:8:21.07:284,21,0	1/1:2,23:25:69.23:986,69,0	1/1:1,10:11:30.10:447,30,0	1/1:1,13:13:39.13:560,39,0	1/1:0,6:6:18.06:263,18,0
chr10	93664630	.	G	GT	12929.84	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.286;DP=353;FS=0.000;HRun=0;HaplotypeScore=203.2004;InbreedingCoeff=0.7075;MQ=38.63;MQ0=0;MQRankSum=-2.984;QD=37.05;ReadPosRankSum=2.260;VQSLOD=4.1335;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:42.04:535,42,0	1/1:0,11:11:33.11:482,33,0	0/0:3,0:2:5.69:0,6,52	0/0:1,0:1:2.80:0,3,13	1/1:2,22:24:63.17:815,63,0	1/1:2,11:13:36.11:492,36,0	1/1:3,12:14:36.11:484,36,0	1/1:3,10:11:27.01:362,27,0	1/1:2,17:19:57.12:787,57,0	1/1:2,24:26:75.11:1048,75,0	1/1:1,13:14:36.12:495,36,0	1/1:3,9:12:33.08:432,33,0	1/1:1,9:10:27.09:381,27,0	1/1:1,11:12:36.04:472,36,0	1/1:0,11:11:33.11:483,33,0	1/1:1,7:8:21.02:281,21,0	1/1:0,3:3:9.03:133,9,0	1/1:1,6:7:18.06:277,18,0	1/1:1,4:5:15.05:221,15,0	1/1:3,25:28:72.23:1020,72,0	1/1:1,2:3:3.01:42,3,0	1/1:1,14:15:45.14:612,45,0	1/1:3,12:15:33.10:454,33,0	1/1:0,9:9:24.08:331,24,0	1/1:1,24:25:75.23:1041,75,0	1/1:4,10:14:39.03:532,39,0	1/1:0,11:10:30.10:435,30,0	1/1:1,6:7:21.05:285,21,0
chr10	93665646	.	GC	G	14966.34	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=20.835;DP=791;FS=0.836;HRun=1;HaplotypeScore=118.7354;InbreedingCoeff=0.9978;MQ=59.18;MQ0=0;MQRankSum=1.785;QD=37.32;ReadPosRankSum=2.762;VQSLOD=4.6363;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1749	0/0:5,0:5:15.05:0,15,240	0/0:29,0:29:84.29:0,84,1342	0/0:32,0:31:69.86:0,70,1252	0/0:19,0:19:51.17:0,51,815	1/1:0,19:19:48.16:671,48,0	1/1:0,31:31:81.27:1133,81,0	0/0:31,0:31:93.28:0,93,1439	0/0:34,0:34:99:0,99,1580	0/0:26,0:27:45.11:0,45,1189	0/0:24,0:24:66.22:0,66,1039	1/1:0,35:35:96.32:1342,96,0	1/1:0,36:35:99:1384,99,0	1/1:0,37:37:99:1384,99,0	0/0:32,0:31:93.29:0,93,1440	0/0:19,0:19:57.19:0,57,911	0/0:34,0:34:99:0,102,1631	0/0:30,0:30:90.31:0,90,1435	1/1:0,29:29:87.28:1198,87,0	1/1:0,15:15:42.14:587,42,0	1/1:0,68:68:99:2517,181,0	1/1:0,17:17:45.15:623,45,0	1/1:0,14:14:33.11:461,33,0	1/1:0,42:42:99:1552,111,0	0/0:23,0:23:69.21:0,69,1078	1/1:1,31:32:48.31:1233,48,0	1/1:0,26:25:63.18:881,63,0	0/0:12,0:12:36.12:0,36,575
chr10	93665836	.	CTTTTTCTTTTTTTT	C	1864.12	PASS	AB=0.986;AC=21;AF=0.375;AN=56;BaseQRankSum=0.782;DP=512;FS=5.436;HRun=0;HaplotypeScore=172.4188;InbreedingCoeff=0.5636;MQ=58.07;MQ0=22;MQRankSum=2.946;QD=10.97;ReadPosRankSum=0.475;VQSLOD=2.3853;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:35.07:0,35,966	0/0:11,0:11:33.07:0,33,943	0/0:44,0:15:29.84:0,30,312	0/0:42,0:10:4.56:0,5,125	0/0:26,0:25:68.62:0,69,1762	0/1:11,0:11:0:0,0,0	0/1:15,0:13:44.49:44,0,55	0/0:31,0:29:63.25:0,63,1277	0/0:11,0:10:24.07:0,24,668	0/0:19,0:19:39.85:0,40,713	0/0:25,0:23:45.96:0,46,1895	0/1:12,0:13:65.28:172,0,65	1/1:9,0:9:13.52:122,14,0	0/1:13,0:13:49.50:50,0,165	0/0:19,0:18:38.96:0,39,1358	0/0:12,0:12:20.99:0,21,601	0/0:33,0:30:72.04:0,72,2606	0/0:23,0:21:54.04:0,54,1744	1/1:17,1:16:32.79:352,33,0	1/1:14,0:13:3.16:298,3,0	1/1:7,10:16:6.02:102,6,0	1/1:10,0:11:16.78:257,17,0	1/1:9,0:10:2.88:158,3,0	0/1:9,0:9:23.17:23,0,48	0/0:11,0:10:30.08:0,30,608	1/1:13,5:17:40.95:397,41,0	1/1:12,0:9:9.84:79,10,0	0/0:6,0:6:17.71:0,18,381
chr10	93666218	.	A	AT	1420.64	PASS	AB=0.955;AC=6;AF=0.107;AN=56;BaseQRankSum=-6.396;DP=470;FS=0.562;HRun=9;HaplotypeScore=56.1358;InbreedingCoeff=0.6100;MQ=73.74;MQ0=1;MQRankSum=0.886;QD=16.52;ReadPosRankSum=0.922;VQSLOD=3.6399;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,30:36:84.23:929,84,0	0/0:4,0:4:9:0,9,78	0/1:17,0:13:21.99:22,0,43	0/0:11,0:11:3.22:0,3,72	0/0:24,0:24:59.98:0,60,521	0/0:15,0:15:44.72:0,45,372	0/0:15,0:15:38.97:0,39,335	0/0:27,0:27:62.95:0,63,545	0/0:19,0:19:47.96:0,48,413	0/0:19,0:19:47.94:0,48,410	0/0:15,0:15:38.99:0,39,339	0/0:11,0:11:26.98:0,27,234	0/0:16,0:16:35.99:0,36,313	0/0:19,0:19:50.99:0,51,442	0/0:7,0:7:21:0,21,182	0/0:24,0:24:59.96:0,60,517	1/1:5,18:23:54.15:597,54,0	0/0:18,0:18:41.99:0,42,365	0/0:28,0:28:62.96:0,63,547	0/0:12,0:12:29.99:0,30,260	0/0:10,0:10:26.94:0,27,227	0/0:9,0:9:17.99:0,18,156	0/0:15,0:15:38.99:0,39,338	0/1:9,1:10:3.07:3,0,204	0/0:17,0:17:41.99:0,42,365	0/0:23,0:23:50.97:0,51,443	0/0:14,0:14:38.99:0,39,338	0/0:12,0:12:29.99:0,30,260
chr10	93666393	.	TAAA	T	1491.01	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.344;DP=397;FS=8.230;HRun=9;HaplotypeScore=116.0807;InbreedingCoeff=0.7775;MQ=74.19;MQ0=6;MQRankSum=-2.106;QD=29.24;ReadPosRankSum=0.833;VQSLOD=1.7979;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:24:63.14:746,63,0	0/0:8,0:8:24.08:0,24,420	0/0:37,0:14:26.84:0,27,388	0/0:36,0:23:25.41:0,25,374	0/0:8,0:8:15.05:0,15,252	0/0:12,0:12:36.12:0,36,597	0/0:5,0:5:12.04:0,12,183	0/0:30,0:30:84.28:0,84,1481	0/0:11,0:11:21.07:0,21,351	0/0:10,0:10:24.07:0,24,437	0/0:7,0:7:21.07:0,21,349	0/0:9,0:9:27.05:0,27,410	0/0:14,0:14:39.13:0,39,611	0/0:14,0:13:39.13:0,39,635	0/0:10,0:10:30.09:0,30,506	0/0:11,0:11:24.08:0,24,416	1/1:8,19:27:68.39:866,68,0	0/0:17,0:17:42.13:0,42,708	0/0:21,0:21:48.16:0,48,756	0/0:6,0:6:18.06:0,18,300	0/0:4,0:4:3.01:0,3,52	0/0:2,0:2:6.02:0,6,103	0/0:3,0:3:3.01:0,3,49	0/0:11,0:11:30.10:0,30,484	0/0:11,0:10:23.67:0,24,426	0/0:21,0:20:54.14:0,54,906	0/0:18,0:18:48.16:0,48,766	0/0:9,0:8:24.08:0,24,406
chr10	93666402	.	AT	A	1738.69	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-9.990;DP=378;FS=2.258;HRun=11;HaplotypeScore=97.9289;InbreedingCoeff=0.8553;MQ=70.29;MQ0=8;MQRankSum=0.364;QD=14.73;ReadPosRankSum=0.814;VQSLOD=4.0218;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:8.23:0,8,99	1/1:2,6:8:17.73:135,18,0	0/0:40,0:13:15.89:0,16,111	0/0:34,0:18:3.90:0,4,70	1/1:1,5:6:11.93:92,12,0	0/0:13,0:13:28.80:0,29,161	0/0:7,0:7:11.64:0,12,70	1/1:7,19:26:56.70:443,57,0	1/1:1,9:10:17.97:147,18,0	1/1:5,4:9:11.34:82,11,0	1/1:0,7:7:20.94:166,21,0	0/0:8,0:8:23.19:0,23,131	0/0:12,0:12:24.40:0,24,136	0/0:14,0:13:37.82:0,38,223	1/1:1,7:8:20.98:172,21,0	1/1:2,8:10:17.97:147,18,0	0/0:29,0:29:25.70:0,26,156	1/1:1,15:16:34.76:272,35,0	0/0:16,0:16:28.41:0,28,152	0/0:6,0:6:8.65:0,9,46	0/0:3,0:3:2.94:0,3,18	0/0:2,0:2:2.99:0,3,24	0/0:1,0:1:2.90:0,3,16	0/0:10,0:10:28.68:0,29,150	1/1:2,8:9:14.98:123,15,0	0/0:19,1:19:9.59:0,10,140	0/0:19,0:19:37.41:0,37,199	1/1:1,7:7:20.98:172,21,0
chr10	93666413	.	T	TTC	2259.26	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-9.897;DP=318;FS=20.339;HRun=0;HaplotypeScore=86.8681;InbreedingCoeff=0.4897;MQ=59.85;MQ0=8;MQRankSum=1.157;QD=10.36;ReadPosRankSum=-1.694;VQSLOD=1.2164;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:23:59.73:828,60,0	0/1:6,0:6:1.20:32,0,1	0/0:20,0:6:17.85:0,18,204	0/1:19,0:7:2.67:3,0,94	1/1:7,0:7:9.14:36,9,0	0/0:12,0:12:4.73:0,5,86	0/1:7,0:7:14.51:15,0,35	1/1:21,0:21:27.54:104,28,0	1/1:11,0:11:17.13:81,17,0	0/1:4,0:4:9.75:18,0,10	1/1:9,0:9:21.50:95,22,0	0/0:8,0:8:20.34:0,20,79	0/0:13,0:13:25.89:0,26,118	0/0:14,0:13:34.33:0,34,145	1/1:7,0:7:17.57:64,18,0	1/1:10,0:10:20.98:99,21,0	1/1:10,14:24:58.21:792,58,0	1/1:15,0:15:15.46:82,15,0	0/1:14,0:13:9.19:9,0,73	0/0:4,0:4:7.57:0,8,28	1/1:3,0:3:5.74:37,6,0	0/0:1,0:1:2.94:0,3,18	0/1:5,0:4:2.02:24,0,2	0/0:11,0:11:7.02:0,7,63	1/1:8,0:7:12.83:49,13,0	0/1:15,0:14:28.33:28,0,71	0/0:17,0:17:15.79:0,16,94	1/1:9,0:7:16.28:56,16,0
chr10	93666959	.	A	ATCTG	386.21	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-0.383;DP=575;FS=1.012;HRun=0;HaplotypeScore=157.0344;InbreedingCoeff=0.7057;MQ=62.35;MQ0=6;MQRankSum=-2.493;QD=4.71;ReadPosRankSum=-1.427;VQSLOD=2.6569;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:31:6.02:161,6,0	0/0:5,0:5:15:0,15,186	0/0:30,0:17:45.06:0,45,454	0/0:25,0:11:30:0,30,309	0/0:24,0:24:72.06:0,72,942	0/0:18,0:18:17.87:0,18,136	0/0:14,0:14:29.82:0,30,230	0/0:27,0:26:71.78:0,72,633	0/0:21,0:21:60.04:0,60,704	0/0:17,0:17:50.99:0,51,530	0/0:26,0:26:68.75:0,69,694	0/0:14,0:14:38.81:0,39,322	0/0:16,0:16:20.85:0,21,177	0/0:13,0:13:20.71:0,21,144	0/1:33,0:33:28.12:28,0,620	0/0:29,0:29:77.92:0,78,860	1/1:18,0:18:27:317,27,0	0/0:17,0:16:38.93:0,39,424	0/0:20,0:20:45.78:0,46,355	0/0:21,0:21:23.97:0,24,168	0/0:12,0:12:17.92:0,18,142	0/0:21,0:20:26.13:0,26,207	0/0:22,0:22:35.86:0,36,285	0/0:22,0:22:32.85:0,33,258	0/0:13,0:13:38.90:0,39,463	0/0:34,0:34:84.92:0,85,737	0/0:27,0:27:47.87:0,48,420	0/0:5,0:5:15:0,15,166
chr10	93666998	.	TATCTATCTATCTATCTATCTATCCATCC	T	4787.56	PASS	AB=1.000;AC=18;AF=0.333;AN=54;BaseQRankSum=-2.244;DP=550;FS=0.000;HRun=0;HaplotypeScore=368.2322;InbreedingCoeff=0.3679;MQ=50.89;MQ0=11;MQRankSum=3.019;QD=19.54;ReadPosRankSum=-2.727;VQSLOD=1.5705;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:66.23:0,66,3330	0/0:8,0:7:18.05:0,18,1016	0/0:8,0:2:6.02:0,6,123	./.	0/0:25,0:24:61.99:0,62,3854	1/1:1,18:18:6.02:387,6,0	0/1:13,0:13:90.59:379,0,91	0/0:36,0:32:80.92:0,81,1107	0/0:22,0:22:54.55:0,55,2629	0/0:19,0:19:51.91:0,52,2302	0/0:21,0:21:39.13:0,39,2086	1/1:13,1:14:33.10:849,33,0	1/1:1,16:17:3.01:224,3,0	1/1:14,0:14:11.82:105,12,0	0/0:33,0:33:90.78:0,91,5178	0/0:28,0:28:75.23:0,75,3894	0/0:15,0:15:24.54:0,25,1290	0/0:18,0:17:46.47:0,46,2036	0/1:25,0:25:48.38:790,0,48	0/1:22,0:22:92.49:263,0,92	0/1:16,0:16:10.22:141,0,10	1/1:3,20:22:5.69:377,6,0	0/0:2,15:17:0.47:0,0,2	1/1:1,19:20:3.01:94,3,0	0/0:9,0:9:27.09:0,27,1820	0/1:36,0:36:99:936,0,344	0/1:26,0:26:14.97:243,0,15	0/0:9,0:8:24.08:0,24,1550
chr10	93667002	.	TATCTATCTATCTATCTATCCATCC	T	5744.24	PASS	AB=0.904;AC=25;AF=0.446;AN=56;BaseQRankSum=-5.754;DP=546;FS=6.301;HRun=0;HaplotypeScore=323.5233;InbreedingCoeff=0.4543;MQ=51.02;MQ0=8;MQRankSum=3.441;QD=18.83;ReadPosRankSum=-3.717;VQSLOD=2.2052;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:69.24:0,69,2811	0/0:7,0:6:15.05:0,15,813	0/0:7,0:4:12.03:0,12,207	0/0:3,0:2:6.02:0,6,131	0/0:25,0:24:16.57:0,17,2868	1/1:19,0:18:6.02:295,6,0	0/1:12,0:12:87.54:308,0,88	0/0:35,0:31:68.87:0,69,818	0/1:22,0:22:14.75:15,0,2126	0/1:22,0:22:39.76:40,0,1794	0/1:20,0:20:28.98:29,0,1431	1/1:15,0:15:33.11:701,33,0	1/1:16,0:16:3.01:178,3,0	1/1:14,0:14:6.02:101,6,0	0/0:34,0:34:66.78:0,67,4062	0/0:25,0:25:18.68:0,19,2852	0/0:15,0:15:24.94:0,25,962	0/0:19,0:18:29.13:0,29,1617	1/1:2,23:25:68.96:1165,69,0	1/1:1,19:20:11.97:442,12,0	1/1:17,0:17:20.97:324,21,0	1/1:22,0:21:6.10:285,6,0	0/0:16,0:16:0.47:0,0,2	1/1:20,0:20:3.01:47,3,0	0/0:10,0:10:2.09:0,2,1329	0/1:3,32:35:99:1424,0,181	1/1:1,25:26:6.02:392,6,0	0/0:11,0:10:30.10:0,30,1371
chr10	93667007	.	A	AGGG	413.77	PASS	AB=0.925;AC=10;AF=0.179;AN=56;BaseQRankSum=4.163;DP=552;FS=1.020;HRun=0;HaplotypeScore=189.2428;InbreedingCoeff=0.4023;MQ=53.13;MQ0=7;MQRankSum=-4.116;QD=3.48;ReadPosRankSum=0.261;VQSLOD=2.7793;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:75.26:0,75,1393	0/0:6,0:5:15:0,15,243	0/0:12,0:9:24.08:0,24,395	0/0:6,0:4:9.03:0,9,168	0/0:28,0:27:66.14:0,66,1204	1/1:19,0:18:6.02:147,6,0	0/1:8,2:10:33.73:34,0,335	0/0:38,0:35:96.29:0,96,1705	0/0:26,0:26:69.08:0,69,1151	0/0:21,0:21:60.19:0,60,1076	0/0:19,0:19:39.13:0,39,698	0/1:11,2:13:99:128,0,412	0/0:16,0:16:2.80:0,3,13	0/0:7,0:7:6.02:0,6,112	0/0:37,0:36:93.16:0,93,1539	0/0:23,0:23:69.16:0,69,1218	0/0:17,0:17:26.94:0,27,431	0/0:20,0:20:50.25:0,50,853	0/0:25,0:25:16.74:0,17,289	0/1:19,0:19:29.80:37,0,30	0/0:16,0:16:21.54:0,22,380	1/1:22,0:21:5.59:147,6,0	0/1:16,0:16:0.04:0,0,0	1/1:20,0:20:3.01:56,3,0	0/0:11,0:11:30.10:0,30,538	0/0:34,0:34:56.54:0,57,1133	0/0:25,0:25:5.95:0,6,42	0/0:10,0:10:30.10:0,30,574
chr10	93667130	.	G	GT	21679.60	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-4.413;DP=599;FS=0.880;HRun=0;HaplotypeScore=70.5818;InbreedingCoeff=0.9992;MQ=68.71;MQ0=0;MQRankSum=-3.919;QD=43.36;ReadPosRankSum=4.182;VQSLOD=5.3802;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1510	1/1:0,9:9:24.08:384,24,0	0/0:24,0:24:67.49:0,67,854	0/0:18,0:17:51.16:0,51,676	1/1:0,36:36:99:1617,102,0	1/1:1,27:28:78.21:1246,78,0	1/1:0,18:18:48.16:767,48,0	1/1:0,25:25:72.25:1151,72,0	1/1:0,14:14:39.13:623,39,0	1/1:4,16:20:54.18:835,54,0	1/1:0,19:18:54.18:863,54,0	1/1:1,22:23:63.13:1007,63,0	1/1:0,25:25:66.23:1054,66,0	1/1:0,17:17:42.14:670,42,0	1/1:0,24:24:57.19:910,57,0	1/1:0,25:25:66.23:1055,66,0	0/0:19,0:19:54.18:0,54,755	1/1:0,24:24:63.21:995,63,0	1/1:1,19:20:54.17:830,54,0	1/1:0,15:15:45.15:719,45,0	1/1:0,16:16:45.15:719,45,0	1/1:0,13:13:36.12:575,36,0	1/1:0,13:14:36.11:552,36,0	1/1:0,29:29:72.25:1151,72,0	1/1:0,18:18:48.16:767,48,0	1/1:4,26:30:87.29:1368,87,0	1/1:0,27:27:81.28:1293,81,0	1/1:0,11:11:33.11:528,33,0
chr10	93667220	.	CTT	C	6710.89	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-4.517;DP=526;FS=10.880;HRun=9;HaplotypeScore=92.8671;InbreedingCoeff=0.9954;MQ=79.88;MQ0=1;MQRankSum=0.233;QD=30.09;ReadPosRankSum=2.155;VQSLOD=4.0410;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:84.11:0,84,1301	0/0:1,0:6:15.02:0,15,145	0/0:20,0:20:29.15:0,29,475	0/0:19,0:19:26.56:0,27,491	0/0:7,0:28:75.15:0,75,805	1/1:5,7:12:30.08:348,30,0	1/1:0,8:8:24.07:280,24,0	0/0:13,0:33:72.15:0,72,798	0/0:3,0:16:42.07:0,42,421	0/0:5,0:23:60.09:0,60,592	0/0:5,0:15:42.09:0,42,446	1/1:4,12:16:42.12:489,42,0	1/1:3,18:21:57.17:664,57,0	1/1:3,7:10:24.07:279,24,0	0/0:6,0:26:66.11:0,66,658	0/0:7,0:21:48.09:0,48,505	0/0:16,0:17:51.17:0,51,810	0/0:5,0:21:57.07:0,57,551	1/1:4,13:17:45.13:524,45,0	1/1:0,25:25:75.19:857,75,0	1/1:1,20:21:48.14:559,48,0	1/1:1,7:8:24.03:265,24,0	1/1:1,14:15:39.12:455,39,0	1/1:4,9:12:27.08:314,27,0	0/0:8,0:19:45.09:0,45,499	1/1:3,33:35:90.26:1048,90,0	1/1:1,20:20:54.16:629,54,0	0/0:4,0:7:18.03:0,18,198
chr10	93667451	.	C	CT	585.06	PASS	AB=0.920;AC=18;AF=0.346;AN=52;BaseQRankSum=3.880;DP=397;FS=8.269;HRun=14;HaplotypeScore=84.8018;InbreedingCoeff=0.4138;MQ=42.89;MQ0=31;MQRankSum=-4.866;QD=3.13;ReadPosRankSum=-2.369;VQSLOD=-0.2377;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:22,1:25:3.45:93,3,0	0/0:5,0:5:2.92:0,3,19	./.	./.	0/0:20,0:18:14.64:0,15,96	0/0:9,0:11:9.43:0,9,49	0/0:18,0:16:22.75:0,23,150	0/0:32,0:25:25.59:0,26,148	0/0:15,0:14:1.51:0,2,90	0/1:21,2:23:15.20:15,0,160	0/0:7,0:7:6.22:0,6,53	0/1:15,0:14:31:31,0,58	0/0:11,0:9:6.69:0,7,38	0/0:9,0:8:4.50:0,4,30	0/0:8,1:9:7.54:0,8,38	0/0:13,0:13:2.83:0,3,18	1/1:24,0:23:12.73:63,13,0	0/0:14,0:13:11.61:0,12,70	1/1:15,3:18:12.40:158,12,0	1/1:11,2:14:12.06:68,12,0	0/1:4,0:4:12.06:15,0,12	0/0:7,0:6:8.86:0,9,58	1/1:5,1:6:3:27,3,0	0/1:11,1:11:27.48:27,0,40	0/0:9,0:9:13.74:0,14,82	1/1:16,2:21:7.64:140,8,0	1/1:8,1:9:17.86:117,18,0	0/0:9,0:9:14.65:0,15,91
chr10	93667478	.	T	TC	5872.79	PASS	AB=0.864;AC=51;AF=0.981;AN=52;BaseQRankSum=-1.151;DP=385;FS=12.692;HRun=0;HaplotypeScore=43.4107;InbreedingCoeff=-0.0626;MQ=33.13;MQ0=53;MQRankSum=-0.105;QD=15.50;ReadPosRankSum=-1.351;VQSLOD=4.7565;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,23:23:30.75:518,31,0	1/1:1,3:3:3.01:43,3,0	./.	./.	1/1:4,15:17:24.08:344,24,0	1/1:6,11:14:15.05:209,15,0	1/1:1,11:10:30.03:402,30,0	1/1:5,19:21:43.63:704,44,0	1/1:7,14:18:21.07:299,21,0	1/1:6,9:11:27.04:360,27,0	1/1:6,3:6:3.01:43,3,0	1/1:7,9:11:14.60:183,15,0	1/1:5,16:19:21.07:298,21,0	1/1:5,11:12:15.05:213,15,0	1/1:6,9:14:15.05:192,15,0	1/1:7,11:13:14.97:166,15,0	0/1:16,3:14:10.75:48,0,11	1/1:7,10:11:11.79:148,12,0	1/1:4,8:11:6:234,6,0	1/1:2,4:4:12.04:158,12,0	1/1:5,6:8:8.96:104,9,0	1/1:3,7:10:6.02:87,6,0	1/1:2,6:6:12.04:170,12,0	1/1:8,9:11:13.26:290,13,0	1/1:2,8:9:8.86:100,9,0	1/1:3,14:14:32.79:389,33,0	1/1:2,4:4:9.03:128,9,0	1/1:2,3:3:3.01:43,3,0
chr10	93667840	.	AT	A	1690.59	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.609;DP=414;FS=1.082;HRun=7;HaplotypeScore=39.9652;InbreedingCoeff=0.9598;MQ=62.47;MQ0=0;MQRankSum=-0.326;QD=20.87;ReadPosRankSum=1.249;VQSLOD=2.8374;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.12:0,42,515	0/0:10,0:10:30.10:0,30,377	0/0:2,0:2:5.93:0,6,48	0/0:6,1:6:12.03:0,12,140	0/0:28,0:28:69.20:0,69,843	0/0:15,0:15:39.11:0,39,478	0/0:8,0:8:21.07:0,21,264	0/0:34,0:34:81.26:0,81,1019	0/0:13,0:13:39.12:0,39,490	0/0:14,0:14:36.12:0,36,453	0/0:20,0:20:57.17:0,57,705	0/0:8,0:8:24.08:0,24,302	0/0:12,0:12:33.11:0,33,415	0/0:9,0:9:27.09:0,27,339	0/0:14,0:14:36.57:0,37,441	0/0:18,0:18:48.15:0,48,604	0/0:13,0:13:36.12:0,36,453	0/0:35,0:35:99:0,102,1266	1/1:7,7:14:27.06:275,27,0	1/1:2,18:19:42.09:428,42,0	1/1:1,6:7:18.04:184,18,0	0/0:9,0:8:21.06:0,21,249	0/0:18,0:18:48.08:0,48,569	0/0:5,0:5:15.05:0,15,189	0/0:13,0:13:36.12:0,36,453	1/1:5,15:20:47.90:458,48,0	1/1:2,18:20:51.12:520,51,0	0/0:13,0:13:24.08:0,24,302
chr10	93667959	.	T	TC	8611.02	PASS	AB=0.550;AC=25;AF=0.446;AN=56;BaseQRankSum=-0.409;DP=504;FS=0.357;HRun=1;HaplotypeScore=66.0664;InbreedingCoeff=0.9276;MQ=79.78;MQ0=0;MQRankSum=-6.940;QD=40.24;ReadPosRankSum=0.977;VQSLOD=5.3914;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:93.30:0,93,1206	0/0:6,0:6:18.02:0,18,214	0/0:13,0:13:39.02:0,39,458	0/0:19,0:19:51.58:0,52,612	0/0:28,0:28:69.21:0,69,881	1/1:0,16:16:45.11:647,45,0	1/1:0,15:15:45.15:671,45,0	0/0:27,0:27:75.23:0,75,951	0/0:16,0:16:48.11:0,48,603	0/0:14,0:14:42.14:0,42,545	0/0:19,0:19:51.17:0,51,661	1/1:1,12:13:39.09:558,39,0	1/1:0,17:17:45.15:672,45,0	1/1:1,10:11:30.10:447,30,0	0/0:21,0:21:54.16:0,54,686	0/0:11,0:11:30.10:0,30,389	0/0:22,0:21:63.20:0,63,817	0/0:24,0:24:63.59:0,64,763	1/1:2,16:18:51.17:763,51,0	1/1:0,20:20:57.19:852,57,0	1/1:0,17:17:48.09:691,48,0	1/1:0,16:16:48.16:716,48,0	1/1:0,13:13:36.12:538,36,0	1/1:0,12:12:30.10:448,30,0	0/0:16,0:16:45.14:0,45,570	0/1:4,18:22:17.74:701,0,18	1/1:0,24:24:66.04:909,66,0	0/0:18,0:17:54.18:0,54,699
chr10	93668033	.	GTC	G	643.76	PASS	AB=0.978;AC=14;AF=0.304;AN=46;BaseQRankSum=6.405;DP=503;FS=1.884;HRun=0;HaplotypeScore=96.7144;InbreedingCoeff=0.6104;MQ=62.93;MQ0=7;MQRankSum=-2.888;QD=4.26;ReadPosRankSum=-3.204;VQSLOD=1.6125;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,108,1822	0/0:6,0:6:12.04:0,12,231	0/0:50,0:28:23.13:0,23,559	0/1:50,0:23:1.32:1,0,407	0/0:26,0:26:57.16:0,57,1013	1/1:4,0:4:11.75:72,12,0	1/1:3,0:3:5.99:48,6,0	0/0:33,0:32:93.06:0,93,1160	0/0:15,1:16:22.08:0,22,577	0/0:20,0:20:60.12:0,60,961	0/0:14,0:14:36.01:0,36,546	./.	1/1:2,0:2:5.78:32,6,0	./.	0/0:26,0:26:57.34:0,57,1041	0/0:13,0:13:39.12:0,39,708	0/0:40,0:39:99:0,103,1780	0/0:27,0:27:38.72:0,39,872	1/1:15,0:12:15.82:231,16,0	0/1:11,0:11:18.10:34,0,18	0/1:23,1:24:0.86:90,0,1	./.	./.	./.	0/0:10,0:10:27.09:0,27,510	0/1:19,1:20:99:136,0,113	1/1:21,1:22:13.09:159,13,0	0/0:13,0:13:39.09:0,39,654
chr10	93668142	.	T	TC	1304.92	PASS	AB=1.000;AC=22;AF=0.688;AN=32;BaseQRankSum=-3.941;DP=279;FS=2.999;HRun=0;HaplotypeScore=68.2092;InbreedingCoeff=0.5427;MQ=45.07;MQ0=31;MQRankSum=3.501;QD=8.47;ReadPosRankSum=2.798;VQSLOD=3.6789;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:28:49.35:0,49,362	1/1:7,0:7:7.88:38,8,0	0/0:21,0:4:8.95:0,9,73	0/0:25,0:8:2.13:0,2,33	1/1:20,0:20:27.84:162,28,0	./.	./.	1/1:26,0:22:22.09:288,22,0	1/1:9,0:8:11.58:76,12,0	1/1:8,12:19:7.97:191,8,0	1/1:14,0:12:22.20:165,22,0	./.	./.	./.	1/1:15,0:15:11.20:141,11,0	1/1:12,0:12:25.73:150,26,0	0/0:35,0:34:70.30:0,70,486	0/1:14,0:11:20.60:83,0,21	./.	./.	./.	./.	./.	./.	1/1:10,0:7:11:109,11,0	1/1:4,0:1:3:26,3,0	./.	0/1:3,0:2:10.04:10,0,16
chr10	93668277	.	TCTTTCTTTCTTTCTTTC	T	2444.49	PASS	AB=0.990;AC=16;AF=0.533;AN=30;BaseQRankSum=3.533;DP=170;FS=0.000;HRun=0;HaplotypeScore=121.0046;InbreedingCoeff=-0.1830;MQ=55.03;MQ0=6;MQRankSum=-2.317;QD=17.34;ReadPosRankSum=4.649;VQSLOD=1.5864;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:15.05:231,15,0	0/1:3,0:3:51.70:101,0,52	0/0:19,0:9:14.64:0,15,173	0/0:6,0:1:3:0,3,29	0/1:18,0:18:84.44:376,0,84	./.	./.	0/1:12,0:7:28.44:33,0,28	1/1:7,0:7:10.85:157,11,0	0/1:14,0:13:18.21:389,0,18	0/1:14,0:14:9.68:312,0,10	./.	./.	./.	0/1:14,0:14:9.76:223,0,10	0/1:10,0:10:53.25:103,0,53	1/1:3,11:14:12.04:361,12,0	1/1:11,0:11:9.03:167,9,0	./.	./.	./.	./.	./.	./.	0/1:10,0:11:45.93:113,0,46	./.	./.	0/0:3,0:3:2.99:0,3,24
chr10	93668281	.	TCTTTCTTTCTTTC	T	5452.58	PASS	AB=0.571;AC=23;AF=0.821;AN=28;BaseQRankSum=-2.558;DP=176;FS=5.015;HRun=0;HaplotypeScore=91.0861;InbreedingCoeff=0.5684;MQ=54.70;MQ0=6;MQRankSum=0.450;QD=37.87;ReadPosRankSum=2.787;VQSLOD=3.8184;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:13:15.05:498,15,0	1/1:1,2:3:0.52:243,1,0	0/0:18,0:8:12.90:0,13,121	0/0:10,0:3:9.02:0,9,89	1/1:2,16:18:39.14:891,39,0	./.	./.	1/1:12,0:7:20.97:227,21,0	1/1:1,7:8:12.02:386,12,0	1/1:1,14:16:39.55:913,40,0	1/1:1,13:14:24.08:823,24,0	./.	./.	./.	1/1:1,12:13:12.04:484,12,0	0/1:3,9:12:5.45:282,0,5	1/1:14,0:14:12.04:271,12,0	1/1:2,9:11:9.03:273,9,0	./.	./.	./.	./.	./.	./.	1/1:1,9:10:6.02:162,6,0	./.	./.	./.
chr10	93668293	.	TC	T	2152.15	PASS	AC=26;AF=0.867;AN=30;BaseQRankSum=-0.347;DP=217;FS=19.954;HRun=1;HaplotypeScore=103.2378;InbreedingCoeff=0.8236;MQ=66.41;MQ0=4;MQRankSum=-1.171;QD=12.30;ReadPosRankSum=0.641;VQSLOD=1.0549;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,1:15:19.12:163,19,0	1/1:5,0:5:6.02:80,6,0	0/0:24,0:11:22.54:0,23,204	0/0:17,0:8:19.51:0,20,177	1/1:22,2:24:45.02:426,45,0	./.	./.	1/1:3,11:10:27.07:329,27,0	1/1:10,0:10:17.85:147,18,0	1/1:17,0:16:33.27:279,33,0	1/1:15,0:15:20.56:155,21,0	./.	./.	./.	1/1:13,0:13:11.61:74,12,0	1/1:12,1:13:10.14:101,10,0	1/1:16,2:18:23.62:227,24,0	1/1:11,1:12:11.65:95,12,0	./.	./.	./.	./.	./.	./.	1/1:14,1:15:17.83:143,18,0	./.	./.	1/1:4,0:4:5.99:49,6,0
chr10	93668318	.	ATCT	A	265.92	PASS	AB=0.912;AC=12;AF=0.375;AN=32;BaseQRankSum=0.879;DP=233;FS=50.664;HRun=0;HaplotypeScore=115.0803;InbreedingCoeff=-0.4024;MQ=59.50;MQ0=14;MQRankSum=-1.348;QD=1.70;ReadPosRankSum=5.301;VQSLOD=-0.2528;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:15:38.68:39,0,42	0/0:7,0:6:6.69:0,7,51	0/0:30,0:12:8.75:0,9,173	0/1:28,0:10:1.02:1,0,31	0/1:20,1:23:66.86:67,0,130	./.	./.	0/0:21,0:20:27.72:0,28,259	0/1:9,1:10:19.14:53,0,19	0/1:16,0:16:9.09:9,0,189	0/1:8,0:8:19.51:20,0,39	./.	./.	./.	0/0:10,0:9:8.84:0,9,54	0/1:8,0:8:27.05:39,0,27	0/1:14,0:17:54.09:54,0,72	0/1:13,0:13:5.49:5,0,62	./.	./.	./.	./.	./.	./.	0/1:8,2:11:50.23:85,0,50	1/1:2,0:1:1.25:3,1,0	./.	0/0:7,0:7:5.63:0,6,41
chr10	93668669	.	C	CATG	12418.45	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=5.154;DP=599;FS=1.928;HRun=0;HaplotypeScore=232.2579;InbreedingCoeff=0.9806;MQ=78.78;MQ0=0;MQRankSum=-14.686;QD=48.13;ReadPosRankSum=-0.792;VQSLOD=4.8984;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,144,2359	0/0:7,0:7:15.05:0,15,250	0/0:27,0:27:72.10:0,72,1116	0/0:28,0:27:71.55:0,72,1038	0/0:20,0:20:34.91:0,35,596	1/1:2,17:19:48.16:1083,48,0	1/1:9,17:26:48.62:986,49,0	0/0:24,0:24:63.21:0,63,1011	0/0:30,0:30:81.27:0,81,1304	0/0:21,0:20:60.21:0,60,1021	0/0:11,0:11:26.62:0,27,458	1/1:5,26:31:78.27:1757,78,0	1/1:4,19:23:63.22:1379,63,0	1/1:3,20:23:60.21:1262,60,0	0/0:28,0:28:78.26:0,78,1273	0/0:20,0:20:54.18:0,54,880	0/0:28,0:28:72.22:0,72,1154	0/0:22,0:22:57.19:0,57,943	1/1:6,14:20:54.16:1166,54,0	1/1:4,15:19:39.13:876,39,0	1/1:6,20:26:45.61:944,46,0	1/1:0,3:3:6.02:135,6,0	1/1:3,7:10:18.53:405,19,0	1/1:3,19:22:19:364,19,0	0/0:13,0:13:26.96:0,27,385	1/1:4,13:17:45.10:955,45,0	1/1:4,14:19:51.16:1105,51,0	0/0:7,0:7:20.95:0,21,282
chr10	93668692	.	AGAAG	A	10252.42	PASS	AB=0.993;AC=44;AF=0.786;AN=56;BaseQRankSum=4.007;DP=616;FS=0.383;HRun=0;HaplotypeScore=271.1349;InbreedingCoeff=0.1404;MQ=60.80;MQ0=1;MQRankSum=-6.981;QD=18.28;ReadPosRankSum=1.750;VQSLOD=4.2815;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:48,3:51:99:629,0,610	0/1:7,0:7:4.08:70,0,4	0/0:30,0:22:53.36:0,53,1160	0/0:25,0:22:50.79:0,51,1285	1/1:21,0:21:28.22:391,28,0	1/1:20,0:20:30.02:269,30,0	1/1:30,0:30:57.03:514,57,0	0/1:24,0:24:51.71:467,0,52	1/1:29,0:29:28.69:756,29,0	0/1:26,0:25:84.02:445,0,84	1/1:15,0:15:6.27:338,6,0	1/1:26,1:27:48.03:447,48,0	1/1:24,1:25:63:551,63,0	1/1:27,0:27:53.26:452,53,0	0/1:30,0:30:17.51:728,0,18	0/1:24,0:24:72.03:316,0,72	1/1:1,26:27:63.22:1221,63,0	0/1:19,0:19:31:305,0,31	1/1:21,0:21:45.11:524,45,0	1/1:19,0:19:35.99:311,36,0	1/1:22,0:24:6.44:132,6,0	1/1:8,0:8:11.96:95,12,0	1/1:12,0:12:20.47:159,20,0	1/1:19,0:19:13.06:104,13,0	1/1:13,0:13:3.21:183,3,0	1/1:14,0:14:29.91:377,30,0	1/1:17,0:17:48.04:460,48,0	0/1:12,0:12:9:9,0,64
chr10	93668694	.	A	AC	2589.75	PASS	AB=0.885;AC=27;AF=0.482;AN=56;BaseQRankSum=-9.196;DP=593;FS=8.279;HRun=0;HaplotypeScore=265.7145;InbreedingCoeff=0.7390;MQ=60.88;MQ0=1;MQRankSum=5.057;QD=8.07;ReadPosRankSum=-2.168;VQSLOD=2.0447;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:51,0:51:99:484,116,0	1/1:5,2:7:3.71:66,4,0	0/0:32,1:23:58.07:0,58,786	0/0:26,0:22:62.84:0,63,845	1/1:14,7:21:4.96:59,5,0	0/0:16,0:16:12.31:0,12,30	0/0:27,0:27:25.53:0,26,63	1/1:24,0:24:45.90:230,46,0	1/1:19,10:29:26.59:254,27,0	1/1:19,7:25:55.06:439,55,0	1/1:11,4:15:10.77:122,11,0	0/0:21,0:21:5.53:0,6,32	0/0:24,0:24:29.54:0,30,76	0/0:26,0:26:22.06:0,22,65	1/1:17,14:31:30.82:303,31,0	1/1:16,9:25:24.07:295,24,0	0/0:26,0:26:32.65:0,33,84	1/1:16,4:20:35.02:280,35,0	1/1:15,0:15:12.81:46,13,0	0/0:17,0:17:18.35:0,18,47	0/0:21,0:21:2.52:0,3,18	0/0:8,0:8:6.29:0,6,17	0/0:11,0:11:10.47:0,10,30	0/1:18,0:18:1.78:2,0,11	0/1:8,5:13:3.97:40,0,4	0/1:13,1:14:3.79:65,0,4	0/0:16,0:16:12.92:0,13,35	1/1:10,2:12:17.98:110,18,0
chr10	93668696	.	G	GACAGACA	8830.27	PASS	AB=0.987;AC=27;AF=0.482;AN=56;BaseQRankSum=-10.495;DP=608;FS=6.890;HRun=0;HaplotypeScore=295.7701;InbreedingCoeff=0.5992;MQ=59.73;MQ0=4;MQRankSum=-1.475;QD=26.05;ReadPosRankSum=-3.005;VQSLOD=2.7500;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:50,0:50:91.49:91,0,821	1/1:5,2:7:4.60:239,5,0	0/0:32,0:21:53.32:0,53,1033	0/0:29,0:25:42.04:0,42,1102	1/1:15,6:22:18.73:410,19,0	0/0:16,0:16:29.32:0,29,272	0/0:27,0:27:47.79:0,48,498	1/1:26,0:26:39.20:584,39,0	1/1:18,8:28:57.58:1158,58,0	1/1:19,7:25:53.01:1288,53,0	1/1:10,4:14:16.32:273,16,0	0/1:22,0:21:14.07:14,0,329	0/0:24,0:24:62.52:0,63,690	0/0:27,0:27:9.93:0,10,402	1/1:18,14:32:70.74:1428,71,0	1/1:16,9:25:53.26:1329,53,0	0/0:26,0:26:63.21:0,63,927	1/1:17,4:21:18.61:841,19,0	0/1:16,0:16:8.72:9,0,238	0/0:17,0:17:36.08:0,36,391	0/0:23,0:23:2.74:0,3,125	0/1:9,0:9:8.36:8,0,78	0/0:11,0:11:10.95:0,11,183	0/0:19,0:19:12.33:0,12,106	1/1:9,4:14:21.07:454,21,0	0/1:13,1:14:99:181,0,197	0/0:18,0:17:39.29:0,39,441	1/1:11,2:13:27.07:522,27,0
chr10	93668705	.	G	GAC	1727.65	PASS	AB=0.992;AC=25;AF=0.446;AN=56;BaseQRankSum=9.783;DP=637;FS=14.548;HRun=0;HaplotypeScore=281.5026;InbreedingCoeff=0.3138;MQ=53.22;MQ0=10;MQRankSum=-11.782;QD=4.92;ReadPosRankSum=-0.968;VQSLOD=1.5515;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,147,1981	0/1:7,0:7:11.29:11,0,88	0/0:36,0:25:69.32:0,69,829	0/0:24,0:20:49.12:0,49,650	0/0:23,0:23:32.36:0,32,377	1/1:15,1:16:10.39:163,10,0	0/1:34,1:31:6.61:169,0,7	0/0:25,0:25:63.64:0,64,783	0/0:26,0:26:26.12:0,26,489	0/1:29,0:28:7.50:8,0,734	0/0:12,0:12:11.49:0,11,205	1/1:20,0:19:19.07:229,19,0	0/1:26,0:26:24.60:130,0,25	1/1:28,0:28:10.11:228,10,0	0/0:31,0:31:14.01:0,14,684	0/1:26,0:26:47.54:48,0,372	0/0:29,0:29:72.24:0,72,1023	0/1:20,0:20:13.66:14,0,385	0/1:19,0:19:5.49:138,0,5	1/1:18,0:18:11.58:189,12,0	1/1:26,1:27:8.61:99,9,0	1/1:11,0:11:11.19:101,11,0	1/1:16,0:16:11.43:126,11,0	0/1:21,1:20:15.66:34,0,16	0/0:16,0:16:17.36:0,17,325	1/1:13,0:13:1.57:127,2,0	0/1:18,0:17:14.20:104,0,14	0/0:13,0:13:7.74:0,8,351
chr10	93668707	.	CAG	C	7469.29	PASS	AB=0.542;AC=25;AF=0.446;AN=56;BaseQRankSum=7.832;DP=641;FS=5.307;HRun=0;HaplotypeScore=261.2230;InbreedingCoeff=0.9375;MQ=52.51;MQ0=10;MQRankSum=-11.535;QD=28.29;ReadPosRankSum=0.023;VQSLOD=4.7067;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,156,2650	0/0:9,0:9:21.04:0,21,297	0/0:35,0:24:69.31:0,69,1074	0/0:24,0:20:48.47:0,48,816	0/0:25,0:25:39.42:0,39,582	1/1:1,15:16:30.10:457,30,0	1/1:7,28:31:58.60:838,59,0	0/0:28,0:28:78.25:0,78,1273	0/0:26,0:26:66.22:0,66,978	0/0:30,0:29:87.29:0,87,1363	0/0:13,0:13:26.81:0,27,366	1/1:2,18:19:45.14:662,45,0	1/1:2,23:25:63.21:960,63,0	1/1:2,24:26:59.09:845,59,0	0/0:31,0:31:84.25:0,84,1187	0/0:26,0:26:60.20:0,60,861	0/0:28,0:28:72.15:0,72,825	0/0:20,0:20:54.18:0,54,873	1/1:5,14:19:50.31:715,50,0	1/1:3,15:18:42.14:639,42,0	1/1:4,21:25:30.09:423,30,0	1/1:1,10:11:15.05:224,15,0	1/1:1,15:16:29.31:417,29,0	1/1:3,19:20:8.39:177,8,0	0/0:16,0:16:33.11:0,33,501	0/1:2,11:13:3.56:465,0,4	1/1:2,16:17:44.13:646,44,0	0/0:13,0:13:33.11:0,33,583
chr10	93668709	.	G	GAC	4937.07	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=12.131;DP=641;FS=5.122;HRun=0;HaplotypeScore=269.5958;InbreedingCoeff=0.7057;MQ=51.59;MQ0=10;MQRankSum=-12.355;QD=14.31;ReadPosRankSum=4.124;VQSLOD=3.8399;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,142,1950	0/1:10,0:10:2.27:2,0,181	0/0:36,0:25:64.05:0,64,850	0/0:24,0:20:41.05:0,41,553	0/0:24,0:24:37.89:0,38,442	1/1:16,0:16:29.91:236,30,0	1/1:29,4:29:59.85:532,60,0	0/0:29,0:29:72.66:0,73,882	0/0:27,0:27:29.15:0,29,517	0/1:30,0:29:8.54:9,0,696	0/0:13,0:13:14.50:0,14,248	1/1:19,0:19:44.87:392,45,0	1/1:23,1:25:62.72:481,63,0	1/1:24,1:25:59.60:565,60,0	0/0:32,0:32:9.36:0,9,617	0/1:26,0:26:47.57:48,0,353	0/0:28,0:28:72.24:0,72,1026	0/1:20,0:20:13.76:14,0,387	1/1:14,4:18:51.07:584,51,0	1/1:15,1:16:41.82:362,42,0	1/1:24,0:24:33:418,33,0	1/1:11,1:12:14.95:152,15,0	1/1:17,1:18:29.89:320,30,0	1/1:20,2:20:3.51:76,4,0	0/0:16,0:16:17.39:0,17,345	1/1:12,0:12:35.77:354,36,0	1/1:17,1:17:44.89:393,45,0	0/0:13,0:13:7.70:0,8,351
chr10	93668720	.	AAAT	A	2444.89	PASS	AB=0.850;AC=11;AF=0.196;AN=56;BaseQRankSum=-0.408;DP=646;FS=2.266;HRun=0;HaplotypeScore=274.0745;InbreedingCoeff=-0.2443;MQ=49.30;MQ0=10;MQRankSum=-7.153;QD=10.77;ReadPosRankSum=-4.913;VQSLOD=2.3379;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:50,1:51:99:0,146,3377	0/1:7,3:10:24.52:25,0,377	0/0:34,0:24:56.82:0,57,1427	0/0:20,0:16:42.19:0,42,913	0/1:20,4:24:99:236,0,595	0/0:17,0:17:47.79:0,48,728	0/0:33,0:29:74.81:0,75,1257	0/1:21,6:27:99:153,0,1108	0/1:16,8:24:99:526,0,602	0/1:19,5:24:99:219,0,1051	0/1:12,2:14:99:130,0,506	0/0:18,0:17:47.76:0,48,757	0/0:26,0:26:77.93:0,78,1397	0/0:27,0:27:76.41:0,76,1248	0/1:24,3:27:99:534,0,803	0/1:19,7:26:99:321,0,806	0/0:29,0:29:81.28:0,81,1866	0/1:16,3:19:99:169,0,772	0/0:20,0:20:57.20:0,57,1299	0/0:18,0:18:47.73:0,48,744	0/0:29,0:29:64.70:0,65,1138	0/0:16,0:16:31.46:0,31,632	0/0:22,0:22:55.45:0,55,1003	0/0:22,0:20:17.04:0,17,290	0/1:15,2:19:99:264,0,625	0/0:13,0:13:39.09:0,39,868	0/0:24,0:23:66.05:0,66,1341	0/1:13,0:13:16.80:17,0,675
chr10	93668920	.	T	TTTTG	17226.44	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-14.850;DP=638;FS=4.814;HRun=0;HaplotypeScore=93.5592;InbreedingCoeff=0.9993;MQ=73.34;MQ0=3;MQRankSum=-5.796;QD=59.20;ReadPosRankSum=2.886;VQSLOD=6.5213;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,2274	0/0:8,0:8:24.07:0,24,411	0/0:27,0:26:74.06:0,74,1271	0/0:30,0:28:69.15:0,69,1191	0/0:17,0:17:39.11:0,39,659	1/1:3,23:27:60.21:1598,60,0	1/1:2,13:16:27.09:719,27,0	0/0:23,0:23:69.20:0,69,1174	0/0:23,0:23:63.22:0,63,1161	0/0:31,0:31:84.27:0,84,1499	0/0:12,0:12:30.09:0,30,527	1/1:0,24:24:57.20:1518,57,0	1/1:1,17:20:48.16:1233,48,0	1/1:1,21:24:60.20:1553,60,0	0/0:29,0:29:87.30:0,87,1612	0/0:28,0:28:66.22:0,66,1193	0/0:34,0:34:93.32:0,93,1720	0/0:12,0:12:33.11:0,33,589	1/1:1,19:21:54:1187,54,0	1/1:3,24:27:72.24:1780,72,0	1/1:3,15:19:42.14:1112,42,0	1/1:0,14:14:30.02:684,30,0	1/1:0,21:21:57.20:1518,57,0	1/1:3,18:24:45.15:1111,45,0	0/0:20,0:20:60.18:0,60,1048	1/1:1,23:25:63.16:1537,63,0	1/1:0,25:26:63.01:1677,63,0	0/0:11,0:11:30.10:0,30,562
chr10	93669128	.	CTT	C	9821.86	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.999;DP=774;FS=0.295;HRun=2;HaplotypeScore=103.5101;InbreedingCoeff=0.9993;MQ=79.63;MQ0=0;MQRankSum=-2.696;QD=44.64;ReadPosRankSum=2.082;VQSLOD=4.8426;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,2430	0/0:7,0:7:21.07:0,21,427	0/0:21,0:21:60.20:0,60,1129	0/0:17,0:17:36.08:0,36,615	0/0:35,0:35:99:0,105,2057	1/1:0,23:23:54.18:881,54,0	1/1:0,28:28:69.24:1126,69,0	0/0:46,0:46:99:0,138,2788	0/0:25,0:25:75.26:0,75,1524	0/0:29,0:29:87.30:0,87,1768	0/0:24,0:24:69.24:0,69,1402	1/1:0,26:26:78.27:1272,78,0	1/1:0,29:29:78.27:1272,78,0	1/1:0,35:35:99:1602,99,0	0/0:34,0:34:99:0,102,2064	0/0:32,0:32:96.33:0,96,1934	0/0:44,0:43:99:0,132,2672	0/0:17,0:17:48.16:0,48,962	0/0:22,0:22:66.23:0,66,1342	0/0:26,0:26:78.17:0,78,1466	0/0:32,0:32:96.33:0,96,1941	1/1:0,33:33:93.32:1517,93,0	1/1:0,21:21:57.19:929,57,0	1/1:0,25:25:75.26:1223,75,0	0/0:23,0:23:69.24:0,69,1402	0/0:31,0:31:93.32:0,93,1880	0/0:38,0:38:99:0,114,2291	0/0:11,0:11:33.11:0,33,671
chr10	93670323	.	CATT	C	5276.51	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=14.249;DP=386;FS=0.869;HRun=0;HaplotypeScore=85.6409;InbreedingCoeff=0.8952;MQ=61.14;MQ0=0;MQRankSum=-12.961;QD=43.61;ReadPosRankSum=-0.439;VQSLOD=5.6369;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.16:0,51,1125	0/0:16,0:16:48.16:0,48,1023	0/0:6,0:6:7.89:0,8,113	0/0:4,0:4:6.02:0,6,124	0/0:34,0:34:99:0,99,2157	1/1:2,14:16:48.16:766,48,0	1/1:1,2:3:9.03:139,9,0	0/0:41,0:40:99:0,117,2512	0/0:6,0:6:18.06:0,18,357	0/0:23,0:23:66.22:0,66,1454	0/0:21,0:21:57.20:0,57,1283	1/1:2,6:8:21.07:317,21,0	1/1:0,7:7:21.07:341,21,0	1/1:1,2:3:6.02:101,6,0	0/0:10,0:10:30.10:0,30,661	0/0:11,0:11:33.11:0,33,761	0/0:28,0:28:81.28:0,81,1839	0/0:13,0:13:39.13:0,39,875	1/1:3,4:6:15.05:256,15,0	1/1:3,17:20:57.19:909,57,0	1/1:0,2:2:3.01:50,3,0	1/1:0,4:4:12.04:198,12,0	1/1:2,15:17:48.15:770,48,0	1/1:0,4:4:2.75:50,3,0	0/0:23,0:23:69.24:0,69,1590	1/1:1,12:13:39.13:662,39,0	1/1:2,15:17:45.14:716,45,0	0/0:11,0:11:33.11:0,33,737
chr10	93670324	.	AT	A	2863.57	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=14.781;DP=383;FS=0.868;HRun=2;HaplotypeScore=78.8223;InbreedingCoeff=0.8948;MQ=61.20;MQ0=0;MQRankSum=-12.823;QD=24.06;ReadPosRankSum=-0.452;VQSLOD=3.2670;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.16:0,51,742	0/0:16,0:16:48.16:0,48,707	0/0:6,0:6:8.71:0,9,91	0/0:4,0:4:6.02:0,6,81	0/0:34,0:34:99:0,102,1474	1/1:15,1:16:46.23:431,46,0	1/1:2,1:3:9.02:96,9,0	0/0:40,0:39:99:0,117,1709	0/0:6,0:6:18.06:0,18,260	0/0:22,0:22:66.22:0,66,968	0/0:21,0:21:57.19:0,57,849	1/1:6,1:8:21.05:231,21,0	1/1:7,0:7:21.04:215,21,0	1/1:3,0:3:6.01:58,6,0	0/0:10,0:10:30.10:0,30,445	0/0:11,0:11:33.11:0,33,495	0/0:28,0:28:81.27:0,81,1209	0/0:14,0:14:42.12:0,42,604	1/1:5,2:6:14.55:94,15,0	1/1:19,0:19:57.11:593,57,0	1/1:2,0:2:2.59:31,3,0	1/1:4,0:4:12.03:128,12,0	1/1:17,0:17:47.01:426,47,0	1/1:4,0:4:2.75:32,3,0	0/0:23,0:23:69.23:0,69,1034	1/1:13,0:13:38.28:284,38,0	1/1:16,0:16:45.08:464,45,0	0/0:11,0:11:33.11:0,33,490
chr10	93670334	.	C	CAT	5233.87	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=13.397;DP=397;FS=5.351;HRun=0;HaplotypeScore=80.6325;InbreedingCoeff=0.9307;MQ=59.56;MQ0=0;MQRankSum=-11.943;QD=37.93;ReadPosRankSum=-1.130;VQSLOD=6.1827;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:45.13:0,45,576	0/0:13,0:13:30.09:0,30,381	0/0:6,0:6:14.91:0,15,156	0/0:4,0:4:8.77:0,9,96	0/0:32,0:32:93.29:0,93,1206	1/1:6,11:17:36.12:597,36,0	1/1:0,3:4:9.03:153,9,0	0/0:39,0:38:99:0,108,1395	0/0:11,0:11:33.09:0,33,419	0/0:20,0:20:48.15:0,48,618	0/0:17,0:17:45.15:0,45,591	1/1:4,3:7:9.03:153,9,0	1/1:2,6:8:21.07:354,21,0	1/1:0,4:4:9.03:153,9,0	0/0:8,0:8:24.08:0,24,316	0/0:10,0:10:24.08:0,24,316	0/0:32,0:32:87.27:0,87,1129	0/0:14,0:14:30.10:0,30,392	1/1:3,5:6:15.05:257,15,0	1/1:5,15:21:45.15:760,45,0	1/1:1,4:5:6:102,6,0	1/1:3,3:6:15.04:225,15,0	1/1:4,15:19:45.12:706,45,0	1/1:2,2:4:6.02:101,6,0	0/0:24,0:24:69.22:0,69,907	1/1:2,14:16:45.15:744,45,0	1/1:0,18:19:57.18:930,57,0	0/0:11,0:11:33.11:0,33,434
chr10	93670470	.	TTCTCGAG	T	9353.02	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=11.633;DP=496;FS=12.208;HRun=0;HaplotypeScore=125.9694;InbreedingCoeff=0.9910;MQ=80.61;MQ0=1;MQRankSum=-14.810;QD=55.67;ReadPosRankSum=1.113;VQSLOD=4.5523;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,4729	0/0:7,0:7:18.06:0,18,719	0/0:23,0:22:54.05:0,54,1904	0/0:23,0:21:22.64:0,23,1353	0/0:20,0:20:54.19:0,54,2123	1/1:1,11:12:27.09:701,27,0	1/1:0,12:12:30.10:767,30,0	0/0:38,0:38:99:0,105,3919	0/0:18,0:18:54.19:0,54,2103	0/0:19,0:19:57.20:0,57,2214	0/0:17,0:17:51.18:0,51,1935	1/1:0,15:15:39.13:993,39,0	1/1:1,12:13:33.11:849,33,0	1/1:2,16:18:36.12:921,36,0	0/0:22,0:22:66.23:0,66,2494	0/0:14,0:14:39.13:0,39,1508	0/0:41,0:41:99:0,120,4622	0/0:15,0:15:45.15:0,45,1779	1/1:5,8:13:24.08:591,24,0	1/1:1,9:10:27.05:620,27,0	1/1:3,16:19:32.78:813,33,0	1/1:0,5:5:15.01:331,15,0	1/1:1,14:15:23.99:597,24,0	1/1:1,10:11:12.04:312,12,0	0/0:12,0:12:36.11:0,36,1269	1/1:0,12:12:36.12:929,36,0	1/1:0,13:13:36.12:928,36,0	0/0:16,0:16:48.16:0,48,1909
chr10	93671639	.	C	CTTT	15841.39	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-12.622;DP=590;FS=0.314;HRun=2;HaplotypeScore=77.7621;InbreedingCoeff=0.9927;MQ=65.51;MQ0=0;MQRankSum=-4.507;QD=55.98;ReadPosRankSum=1.478;VQSLOD=4.8275;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.33:0,96,1604	0/0:8,0:8:24.08:0,24,398	0/0:6,0:6:14.72:0,15,172	0/0:11,0:10:27.09:0,27,437	0/0:26,0:26:75.26:0,75,1241	1/1:3,17:22:57.20:1271,57,0	1/1:4,17:21:54.19:1216,54,0	0/0:22,0:22:60.19:0,60,979	0/0:25,0:25:66.22:0,66,1102	0/0:30,0:30:87.30:0,87,1452	0/0:20,0:20:57.19:0,57,953	1/1:1,27:30:78.24:1747,78,0	1/1:1,30:31:84.29:1936,84,0	1/1:2,14:18:36.12:797,36,0	0/0:24,0:24:66.22:0,66,1103	0/0:22,0:22:63.22:0,63,1052	0/0:29,0:29:84.24:0,84,1374	0/0:21,0:21:63.22:0,63,1053	1/1:6,17:24:69.22:1504,69,0	1/1:1,14:15:42.14:903,42,0	1/1:2,14:17:39.13:898,39,0	1/1:1,12:13:33.11:731,33,0	1/1:6,21:27:69.24:1502,69,0	1/1:1,4:6:12.04:276,12,0	0/0:19,0:19:54.18:0,54,903	1/1:3,23:26:25.07:1607,25,0	1/1:4,28:33:66.08:1453,66,0	0/0:10,0:10:30.10:0,30,502
chr10	93672220	.	A	AGC	3473.66	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.628;DP=763;FS=1.620;HRun=0;HaplotypeScore=107.2537;InbreedingCoeff=0.9997;MQ=93.46;MQ0=0;MQRankSum=-4.992;QD=50.34;ReadPosRankSum=2.206;VQSLOD=4.4143;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,37:40:99:2027,105,0	0/0:10,0:10:30.10:0,30,459	0/0:39,0:39:99:0,108,1575	0/0:26,0:26:72.20:0,72,1025	0/0:34,0:34:99:0,102,1530	0/0:22,0:22:60.20:0,60,914	0/0:19,0:19:57.19:0,57,873	0/0:29,0:29:84.27:0,84,1249	0/0:25,0:25:75.24:0,75,1122	0/0:32,0:32:96.31:0,96,1449	0/0:25,0:25:75.25:0,75,1144	0/0:15,0:15:45.15:0,45,689	0/0:30,0:30:90.31:0,90,1378	0/0:34,0:34:96.31:0,96,1442	0/0:24,0:24:69.22:0,69,1035	0/0:34,0:34:99:0,99,1515	1/1:1,27:29:75.26:1447,75,0	0/0:25,0:25:75.25:0,75,1149	0/0:18,0:18:54.17:0,54,802	0/0:38,0:38:99:0,111,1676	0/0:31,0:31:90.31:0,90,1378	0/0:28,0:28:84.28:0,84,1276	0/0:20,0:20:60.20:0,60,917	0/0:26,0:26:78.26:0,78,1195	0/0:23,0:23:66.22:0,66,1011	0/0:33,0:33:93.31:0,93,1406	0/0:41,0:41:99:0,117,1791	0/0:13,0:13:39.13:0,39,597
chr10	93672785	.	A	AC	5020.26	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-11.224;DP=670;FS=5.622;HRun=6;HaplotypeScore=82.7765;InbreedingCoeff=0.9084;MQ=85.99;MQ0=2;MQRankSum=0.030;QD=22.41;ReadPosRankSum=1.939;VQSLOD=4.2256;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,114,1134	0/0:9,0:9:27.06:0,27,275	0/1:51,0:44:14.93:15,0,574	0/0:39,0:33:49.23:0,49,415	0/0:18,0:18:48.05:0,48,482	1/1:0,26:26:75.24:943,75,0	1/1:3,21:24:48.15:604,48,0	0/0:24,0:24:60.11:0,60,603	0/0:26,0:26:66.09:0,66,656	0/0:23,0:23:53.76:0,54,517	0/0:21,0:21:51:0,51,494	1/1:1,19:20:48.15:604,48,0	1/1:3,16:19:47.85:600,48,0	1/1:1,22:24:66.04:805,66,0	0/0:27,0:27:72.14:0,72,726	0/0:31,0:31:90.19:0,90,908	0/0:27,0:27:78.14:0,78,784	0/0:26,0:26:78.11:0,78,781	0/0:23,0:23:66.12:0,66,660	0/0:13,0:13:27.06:0,27,275	0/0:27,0:27:69.15:0,69,703	1/1:3,12:15:27.06:323,27,0	1/1:1,18:19:35.86:447,36,0	1/1:5,21:26:54.17:679,54,0	0/0:14,0:14:39.09:0,39,397	0/0:26,0:26:72.15:0,72,729	0/0:25,0:25:63.11:0,63,633	0/0:3,0:3:9.01:0,9,85
chr10	93673137	.	AGCGCTT	A	11897.88	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=9.537;DP=483;FS=6.735;HRun=0;HaplotypeScore=114.4534;InbreedingCoeff=0.9477;MQ=47.61;MQ0=7;MQRankSum=-15.424;QD=57.76;ReadPosRankSum=0.723;VQSLOD=4.3991;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:84.29:0,84,2980	0/0:5,0:5:9.03:0,9,261	0/0:2,0:2:3.01:0,3,108	0/0:5,0:5:6.02:0,6,94	0/0:25,0:25:69.24:0,69,2484	1/1:1,15:15:36.12:864,36,0	1/1:0,12:12:27.09:649,27,0	0/0:27,0:25:69.24:0,69,2446	0/0:17,0:17:51.18:0,51,1800	0/0:16,0:16:42.14:0,42,1439	0/0:15,0:15:42.14:0,42,1514	1/1:0,16:16:48.16:1153,48,0	1/1:0,12:12:36.12:865,36,0	1/1:0,18:18:48.16:1153,48,0	0/0:17,0:17:51.18:0,51,1838	0/0:11,0:11:30.09:0,30,991	0/0:44,0:43:99:0,114,3847	0/0:39,0:39:99:0,111,3945	1/1:1,13:14:42.14:993,42,0	1/1:0,15:15:36.12:865,36,0	1/1:1,12:13:21.03:452,21,0	1/1:2,14:16:33.11:792,33,0	1/1:2,8:9:21.07:504,21,0	1/1:5,12:17:21.54:505,22,0	0/0:19,0:19:57.20:0,57,1969	1/1:3,22:24:66.23:1555,66,0	1/1:2,20:22:66.23:1547,66,0	0/0:4,0:4:12.04:0,12,432
chr10	93673199	.	GA	G	2239.95	PASS	AB=0.923;AC=12;AF=0.214;AN=56;BaseQRankSum=3.141;DP=592;FS=2.917;HRun=10;HaplotypeScore=121.6340;InbreedingCoeff=0.7587;MQ=65.59;MQ0=10;MQRankSum=0.505;QD=14.18;ReadPosRankSum=-3.162;VQSLOD=2.6096;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:24,2:25:1.14:1,0,561	0/0:2,0:2:5.84:0,6,34	0/0:23,0:16:41.90:0,42,383	0/0:25,1:22:34.53:0,35,382	0/0:32,0:32:84.61:0,85,523	0/0:21,0:21:48.08:0,48,510	0/0:15,0:15:39.07:0,39,413	0/0:23,0:21:17.59:0,18,182	0/0:13,0:13:25.84:0,26,166	0/0:30,0:30:65.73:0,66,345	0/0:26,0:26:44.90:0,45,359	0/0:17,0:17:48.09:0,48,517	0/0:15,0:16:40.63:0,41,440	0/0:20,0:20:45.08:0,45,483	0/0:14,0:14:29.22:0,29,169	0/1:10,1:11:24.17:24,0,91	0/0:39,0:39:80.76:0,81,905	0/0:47,0:46:99:0,109,652	1/1:4,26:29:71.96:621,72,0	1/1:1,18:19:47.94:409,48,0	1/1:5,5:10:23.97:204,24,0	0/0:13,0:13:36.10:0,36,398	0/0:11,1:11:1.02:0,1,239	0/0:13,0:13:33.09:0,33,365	0/0:24,0:24:67.11:0,67,384	1/1:10,18:27:50.93:532,51,0	1/1:3,31:34:71.98:624,72,0	0/0:6,0:6:10.54:0,11,65
chr10	93675599	.	T	TA	15612.93	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.457;DP=635;FS=4.839;HRun=9;HaplotypeScore=89.2343;InbreedingCoeff=0.9927;MQ=81.24;MQ0=0;MQRankSum=-7.250;QD=26.37;ReadPosRankSum=5.045;VQSLOD=4.6891;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:35:84.14:899,84,0	1/1:5,9:14:27.06:291,27,0	0/0:34,0:34:56.90:0,57,483	0/0:9,0:9:17.03:0,17,135	1/1:2,21:23:50.51:665,51,0	1/1:5,18:23:56.82:617,57,0	1/1:2,11:13:30.08:332,30,0	1/1:5,27:32:79.08:855,79,0	1/1:3,18:21:51.10:549,51,0	1/1:4,28:32:82.42:875,82,0	1/1:3,19:22:28.09:537,28,0	1/1:4,18:22:51.14:562,51,0	1/1:3,25:28:69.11:730,69,0	1/1:3,20:23:51.14:564,51,0	1/1:2,18:20:53.83:586,54,0	1/1:3,26:30:77.75:841,78,0	1/1:5,16:21:57.13:619,57,0	1/1:1,18:19:48.13:531,48,0	1/1:10,16:28:62.87:658,63,0	1/1:2,26:28:75.13:803,75,0	1/1:5,12:17:29.63:315,30,0	1/1:2,15:17:45:467,45,0	1/1:2,25:27:71.82:795,72,0	1/1:3,12:15:33.01:349,33,0	1/1:3,15:17:42.05:449,42,0	1/1:2,29:31:60.47:901,60,0	1/1:2,19:21:51.14:564,51,0	1/1:6,6:12:28.88:259,29,0
chr10	93675666	.	CTATCCACCTATCCATCCAT	C	18114.70	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=1.183;DP=553;FS=11.634;HRun=0;HaplotypeScore=347.9968;InbreedingCoeff=0.3102;MQ=78.93;MQ0=2;MQRankSum=-8.525;QD=43.65;ReadPosRankSum=4.581;VQSLOD=2.1860;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:51.40:0,51,1812	1/1:1,3:4:9.03:392,9,0	0/0:43,0:35:99:0,105,3023	0/0:44,0:32:96.02:0,96,2571	1/1:16,3:19:18.32:434,18,0	1/1:18,0:18:45.11:1163,45,0	1/1:12,0:12:21.86:354,22,0	1/1:1,21:21:63.09:1352,63,0	1/1:6,4:10:27.09:901,27,0	1/1:15,7:22:63.19:2217,63,0	1/1:16,1:17:27.45:598,27,0	1/1:12,0:12:10.92:480,11,0	1/1:18,0:18:13.95:1003,14,0	0/1:17,0:17:10.99:883,0,11	1/1:14,6:20:48.14:1504,48,0	1/1:19,3:22:63.19:1675,63,0	0/0:27,0:27:81:0,81,4233	1/1:7,1:8:21.04:584,21,0	0/1:20,0:20:99:438,0,268	0/1:23,0:23:99:278,0,114	0/1:38,0:38:99:668,0,148	0/1:15,0:15:2:395,0,2	1/1:20,0:20:12.04:604,12,0	0/1:9,0:9:16.16:71,0,16	1/1:12,2:14:30.05:795,30,0	0/1:22,0:22:99:290,0,490	0/1:23,0:23:99:209,0,625	1/1:10,0:10:30.10:829,30,0
chr10	93675667	.	TATCCACCTATCCATCCATCATCC	T	19824.66	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=-2.271;DP=551;FS=8.816;HRun=0;HaplotypeScore=378.2234;InbreedingCoeff=0.4678;MQ=78.14;MQ0=2;MQRankSum=-5.781;QD=48.24;ReadPosRankSum=2.857;VQSLOD=1.7356;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:51.14:0,51,1814	1/1:4,0:4:9.03:394,9,0	0/0:45,0:35:84.28:0,84,2111	0/0:43,0:31:72.03:0,72,1819	1/1:19,0:19:18.53:289,19,0	1/1:11,7:18:51.16:1874,51,0	1/1:11,2:13:19.67:559,20,0	1/1:22,0:21:45.15:897,45,0	1/1:10,0:10:27.09:832,27,0	1/1:21,0:21:54.18:2018,54,0	1/1:16,0:16:19.28:443,19,0	1/1:7,5:12:30.10:821,30,0	1/1:11,6:17:42.14:1581,42,0	1/1:8,9:17:33.10:1419,33,0	1/1:20,0:20:25.25:1170,25,0	1/1:20,0:20:40.30:1279,40,0	0/0:27,0:27:72.05:0,72,4668	1/1:8,0:8:18.06:456,18,0	0/1:19,0:19:99:653,0,319	0/1:24,0:24:99:357,0,287	0/1:38,0:38:99:797,0,181	1/1:10,5:15:21.06:714,21,0	1/1:12,8:20:39.08:1050,39,0	1/1:7,2:9:4.65:116,5,0	1/1:14,0:14:27.09:604,27,0	0/1:22,0:22:99:451,0,592	0/1:23,0:23:99:335,0,959	1/1:10,0:10:30.03:716,30,0
chr10	93675671	.	CACCT	C	10327.18	PASS	AB=0.823;AC=46;AF=0.821;AN=56;BaseQRankSum=5.679;DP=542;FS=4.952;HRun=0;HaplotypeScore=229.8303;InbreedingCoeff=0.7121;MQ=68.60;MQ0=9;MQRankSum=-6.002;QD=25.31;ReadPosRankSum=5.031;VQSLOD=4.4579;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:6.92:0,7,757	1/1:4,0:4:9.03:134,9,0	0/0:41,0:29:84.28:0,84,1904	0/0:42,0:25:69.14:0,69,1484	1/1:19,0:19:15.48:159,15,0	1/1:19,0:18:41.54:533,42,0	1/1:13,0:13:9.70:273,10,0	1/1:23,0:21:36:486,36,0	1/1:10,0:10:23.14:254,23,0	1/1:21,0:20:40.16:633,40,0	1/1:15,0:15:19.59:248,20,0	1/1:12,0:12:15.08:232,15,0	1/1:15,0:15:32.99:407,33,0	1/1:15,0:15:23.05:330,23,0	1/1:18,0:18:39.84:541,40,0	1/1:20,0:20:57.11:734,57,0	0/0:27,0:27:80.86:0,81,1703	1/1:9,0:9:18.42:233,18,0	0/1:18,1:19:2.97:544,0,3	0/1:13,10:23:16.49:641,0,16	1/1:37,2:39:43.42:885,43,0	1/1:13,0:13:21.05:280,21,0	1/1:19,0:19:18.65:323,19,0	1/1:8,0:8:5.18:54,5,0	1/1:12,1:13:26.28:321,26,0	1/1:21,6:27:31.47:922,31,0	1/1:18,6:24:37:825,37,0	1/1:10,0:10:29.89:337,30,0
chr10	93675678	.	CCATCCAT	C	9481.21	PASS	AB=0.906;AC=49;AF=0.875;AN=56;BaseQRankSum=2.153;DP=510;FS=1.742;HRun=0;HaplotypeScore=247.0434;InbreedingCoeff=0.4488;MQ=55.91;MQ0=11;MQRankSum=-6.201;QD=21.65;ReadPosRankSum=5.420;VQSLOD=4.2908;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:23:32.99:355,0,33	1/1:4,0:4:9.03:164,9,0	0/0:37,0:22:45.13:0,45,556	0/0:35,0:18:39.09:0,39,487	1/1:19,0:19:0.47:2,0,0	1/1:17,0:16:39.13:570,39,0	1/1:10,0:10:8.97:136,9,0	1/1:23,0:21:18.06:261,18,0	1/1:10,0:10:24.02:341,24,0	1/1:17,0:16:39.13:644,39,0	1/1:11,0:11:8.82:130,9,0	1/1:9,0:9:17.97:225,18,0	1/1:15,0:15:30.10:455,30,0	1/1:15,0:15:23.99:376,24,0	1/1:18,0:18:33.07:489,33,0	1/1:18,0:18:27.09:425,27,0	0/1:29,0:29:99:379,0,668	1/1:7,0:7:11.83:158,12,0	1/1:20,0:19:25.30:560,25,0	0/1:14,9:23:3.18:474,0,3	1/1:42,0:42:47.77:768,48,0	1/1:13,0:13:15.05:217,15,0	1/1:18,0:18:20.96:262,21,0	1/1:8,0:8:1.87:42,2,0	1/1:12,0:12:14.86:212,15,0	1/1:26,0:26:20.61:823,21,0	1/1:21,0:21:42:756,42,0	1/1:9,0:9:18.06:257,18,0
chr10	93675682	.	CCAT	C	9520.78	PASS	AB=0.912;AC=47;AF=0.839;AN=56;BaseQRankSum=2.904;DP=495;FS=0.000;HRun=0;HaplotypeScore=209.0002;InbreedingCoeff=0.3451;MQ=52.11;MQ0=11;MQRankSum=-5.459;QD=22.30;ReadPosRankSum=3.464;VQSLOD=4.7349;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,1:23:58.92:690,59,0	1/1:4,0:4:9.03:130,9,0	0/0:34,0:18:45.13:0,45,556	0/0:33,0:17:39.08:0,39,486	0/1:17,0:17:0:2,0,0	1/1:17,0:16:39.08:508,39,0	1/1:9,0:9:8.94:123,9,0	1/1:23,0:21:18.06:261,18,0	1/1:10,0:10:24.01:289,24,0	1/1:16,0:15:39.05:474,39,0	1/1:9,0:9:8.86:128,9,0	1/1:9,0:9:17.95:184,18,0	1/1:14,0:14:30.02:366,30,0	1/1:14,0:14:23.90:266,24,0	1/1:16,0:16:33.07:456,33,0	1/1:16,0:16:27.09:391,27,0	0/1:29,0:29:40.50:517,0,41	1/1:6,0:6:12.04:163,12,0	0/1:20,1:20:25.18:536,0,25	1/1:21,3:24:57.19:857,57,0	1/1:41,1:42:6.21:752,6,0	1/1:13,0:13:15.05:216,15,0	1/1:17,0:17:20.90:254,21,0	1/1:8,0:8:1.76:41,2,0	1/1:10,0:10:14.84:195,15,0	0/1:23,6:29:32.35:875,0,32	0/1:15,6:21:6.64:587,0,7	1/1:8,0:8:18.06:257,18,0
chr10	93675685	.	T	TC	11035.03	PASS	AB=0.609;AC=51;AF=0.911;AN=56;BaseQRankSum=4.736;DP=487;FS=3.769;HRun=1;HaplotypeScore=189.8579;InbreedingCoeff=0.7723;MQ=49.39;MQ0=13;MQRankSum=-4.135;QD=26.03;ReadPosRankSum=3.336;VQSLOD=4.8117;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,20:25:66.18:894,66,0	1/1:3,1:4:9.03:127,9,0	0/0:31,0:15:45.13:0,45,556	0/0:32,0:15:39.11:0,39,490	0/1:5,9:14:0.32:0,0,0	1/1:9,8:16:36.39:442,36,0	1/1:2,7:9:8.81:125,9,0	1/1:23,0:21:18.06:261,18,0	1/1:6,4:10:23.96:287,24,0	1/1:10,6:15:30.83:383,31,0	1/1:1,8:9:9.03:122,9,0	1/1:6,2:8:16.78:166,17,0	1/1:9,4:13:31.42:360,31,0	1/1:12,3:15:23.89:235,24,0	1/1:7,9:16:33.07:457,33,0	1/1:5,7:12:27.09:390,27,0	1/1:1,29:30:87.29:1269,87,0	1/1:4,3:7:12:163,12,0	1/1:7,15:19:54.18:773,54,0	1/1:14,12:26:55.94:643,56,0	1/1:2,41:43:75.82:1089,76,0	1/1:8,5:13:15.05:207,15,0	1/1:10,6:16:20.67:238,21,0	1/1:3,5:8:3.48:46,3,0	1/1:4,6:10:15.02:195,15,0	1/1:10,19:29:87.22:1152,87,0	1/1:8,13:21:57.15:771,57,0	1/1:0,5:6:18.05:241,18,0
chr10	93675696	.	TC	T	37.71	PASS	AB=0.636;AC=1;AF=0.018;AN=56;BaseQRankSum=2.500;DP=592;FS=1.653;HRun=2;HaplotypeScore=249.3625;InbreedingCoeff=-0.0253;MQ=43.43;MQ0=20;MQRankSum=-2.993;QD=5.39;ReadPosRankSum=0.336;VQSLOD=0.3233;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:63.21:0,63,913	0/0:5,0:5:14.54:0,15,131	0/0:31,0:11:23.75:0,24,316	0/0:29,0:9:15.57:0,16,219	0/0:20,0:20:11.94:0,12,155	0/0:26,0:25:47.93:0,48,558	0/0:18,0:18:27.33:0,27,335	0/0:32,0:29:37.95:0,38,458	0/0:15,0:15:29.09:0,29,321	0/0:21,0:20:34.43:0,34,491	0/0:11,0:11:8.46:0,8,97	0/0:12,0:12:26.57:0,27,307	0/0:21,0:21:42.61:0,43,422	0/0:16,0:16:32.40:0,32,302	0/0:19,0:19:41.67:0,42,419	0/0:15,0:15:38.47:0,38,407	0/0:32,0:32:93.30:0,93,1355	0/0:17,0:17:44.41:0,44,550	0/0:27,0:22:63.20:0,63,880	0/0:31,0:31:86.92:0,87,1127	0/0:46,0:46:86.32:0,86,1153	0/0:22,0:21:36.07:0,36,491	0/0:19,0:19:23.65:0,24,274	0/0:10,0:10:8.77:0,9,110	0/0:13,0:13:23.37:0,23,260	0/0:32,0:32:96.30:0,96,1321	0/0:20,0:20:57.16:0,57,762	0/1:3,4:7:67.09:112,0,67
chr10	93675700	.	TC	T	468.56	PASS	AB=0.859;AC=9;AF=0.161;AN=56;BaseQRankSum=8.010;DP=590;FS=0.000;HRun=2;HaplotypeScore=244.9578;InbreedingCoeff=-0.1980;MQ=44.04;MQ0=22;MQRankSum=-6.484;QD=3.75;ReadPosRankSum=3.095;VQSLOD=0.1601;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:23:63.21:0,63,913	0/1:4,1:5:59.22:59,0,74	0/0:26,0:8:12.04:0,12,173	0/0:26,0:9:11.43:0,11,194	0/0:17,3:20:11.96:0,12,173	0/0:24,0:23:47.41:0,47,540	0/0:17,0:17:29.29:0,29,365	0/0:31,0:28:51.17:0,51,713	0/1:16,0:16:77.27:77,0,315	0/1:19,3:21:99:155,0,281	0/1:6,4:10:33.53:37,0,34	0/0:13,0:13:29.48:0,29,372	0/0:21,0:21:38.53:0,39,434	0/0:16,0:16:28.75:0,29,267	0/1:14,4:18:78.24:78,0,271	0/1:10,5:15:42.33:42,0,276	0/0:31,0:31:90.30:0,90,1328	0/1:17,1:18:20.61:21,0,545	0/0:29,0:24:69.23:0,69,977	0/0:30,0:30:84.26:0,84,1149	0/0:44,0:44:84.37:0,84,1123	0/0:26,0:24:38.53:0,39,529	0/0:19,0:19:18.16:0,18,214	0/0:11,0:11:11.82:0,12,174	0/1:11,4:15:47.31:47,0,273	0/0:33,0:33:96.30:0,96,1319	0/0:21,0:21:57.14:0,57,741	0/1:6,0:6:69.07:93,0,69
chr10	93675718	.	CATCCATCT	C	2991.18	PASS	AB=0.924;AC=18;AF=0.321;AN=56;BaseQRankSum=3.678;DP=594;FS=0.000;HRun=0;HaplotypeScore=266.9201;InbreedingCoeff=-0.0239;MQ=49.62;MQ0=14;MQRankSum=-2.624;QD=10.96;ReadPosRankSum=-1.353;VQSLOD=2.0143;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:26:55.26:0,55,683	1/1:3,3:6:14.49:202,14,0	0/0:24,0:13:35.98:0,36,339	0/0:23,0:13:35.78:0,36,334	0/1:16,3:19:0.67:155,0,1	0/1:28,0:28:43.81:44,0,579	0/0:22,0:22:25.67:0,26,558	0/1:30,0:29:42:423,0,42	0/1:15,4:19:31.91:295,0,32	0/1:17,7:24:26.97:751,0,27	1/1:5,1:6:5.03:53,5,0	0/1:19,0:19:17.59:18,0,452	0/1:21,0:21:99:121,0,295	0/1:22,0:22:99:136,0,400	1/1:11,6:17:1.84:243,2,0	0/1:9,3:12:20.74:244,0,21	0/0:26,0:26:75.63:0,76,1819	0/1:19,1:20:52.48:236,0,52	0/0:28,0:25:71.60:0,72,998	0/0:28,0:28:4.99:0,5,930	0/0:42,0:42:85.57:0,86,1047	0/0:28,0:26:39.96:0,40,594	0/1:17,0:17:33.08:33,0,235	0/0:14,0:14:30.39:0,30,326	0/1:11,2:13:15.55:204,0,16	0/0:34,0:34:69.75:0,70,1165	0/0:21,0:21:30.31:0,30,540	0/0:2,0:2:5.88:0,6,37
chr10	93676252	.	A	ATT	18561.90	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-7.228;DP=401;FS=5.791;HRun=0;HaplotypeScore=43.3890;InbreedingCoeff=0.9443;MQ=72.40;MQ0=0;MQRankSum=-2.469;QD=53.03;ReadPosRankSum=1.790;VQSLOD=5.0956;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:45.15:0,45,717	1/1:0,6:6:18.06:342,18,0	0/0:8,0:8:23.54:0,24,310	0/0:5,0:6:18.02:0,18,258	1/1:0,23:23:66.18:1294,66,0	1/1:2,15:16:42.14:845,42,0	1/1:0,6:6:18.06:366,18,0	1/1:2,28:31:87.28:1698,87,0	1/1:0,10:10:24.08:488,24,0	1/1:1,24:25:75.26:1512,75,0	1/1:0,17:17:51.09:900,51,0	1/1:0,8:8:18.06:365,18,0	1/1:0,14:14:36.12:732,36,0	1/1:4,4:8:24.06:417,24,0	1/1:0,20:20:57.20:1158,57,0	1/1:0,7:7:15.05:305,15,0	0/0:22,0:22:63.20:0,63,990	1/1:1,10:12:24.04:446,24,0	1/1:1,4:5:15.05:305,15,0	1/1:0,26:26:78.20:1407,78,0	1/1:0,8:10:21.07:427,21,0	1/1:0,6:6:18.06:366,18,0	1/1:1,9:10:24.04:446,24,0	1/1:0,2:2:6.02:122,6,0	1/1:0,27:27:78.27:1581,78,0	1/1:0,23:24:72.25:1400,72,0	1/1:1,22:23:66.23:1339,66,0	1/1:0,12:12:15.05:304,15,0
chr10	93676308	.	A	AT	1260.43	PASS	AB=0.709;AC=16;AF=0.308;AN=52;BaseQRankSum=0.183;DP=252;FS=8.877;HRun=4;HaplotypeScore=64.9144;InbreedingCoeff=0.3864;MQ=71.23;MQ0=1;MQRankSum=-2.090;QD=10.96;ReadPosRankSum=0.676;VQSLOD=0.6379;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:18.03:0,18,193	0/1:1,2:3:1.64:48,0,2	0/0:7,0:7:5.74:0,6,61	0/0:5,0:5:8.87:0,9,62	0/1:8,3:11:28.98:52,0,29	0/0:19,0:17:44.80:0,45,374	0/0:1,0:1:2.99:0,3,23	1/1:21,16:37:17.51:474,18,0	0/1:3,1:4:17.98:20,0,18	1/1:3,6:9:20.99:192,21,0	0/1:4,4:8:19.18:84,0,19	0/0:4,0:4:8.88:0,9,74	0/0:7,0:7:17.96:0,18,149	0/0:4,0:4:11.97:0,12,102	0/1:4,2:6:11.19:32,0,11	1/1:2,5:7:4.58:122,5,0	0/0:13,0:13:36.09:0,36,400	1/1:3,8:11:11.76:184,12,0	0/0:6,0:6:15.04:0,15,170	0/0:17,0:17:39.09:0,39,432	0/0:6,0:6:15.04:0,15,170	./.	0/0:3,0:3:8.88:0,9,70	./.	0/1:7,8:15:13.67:173,0,14	0/0:18,0:18:48.13:0,48,537	0/0:20,0:19:51.13:0,51,569	1/1:2,2:4:5.98:48,6,0
chr10	93676312	.	TAATA	T	107.86	PASS	AB=0.894;AC=7;AF=0.135;AN=52;BaseQRankSum=-0.580;DP=231;FS=6.872;HRun=0;HaplotypeScore=77.7518;InbreedingCoeff=-0.1751;MQ=66.75;MQ0=1;MQRankSum=1.752;QD=1.28;ReadPosRankSum=-5.266;VQSLOD=-0.6467;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:18.04:0,18,435	0/1:3,0:3:18.95:19,0,43	0/0:3,0:3:5.06:0,5,72	0/0:4,0:4:11.85:0,12,139	0/1:10,2:12:21.79:22,0,209	0/0:17,0:15:44.40:0,44,884	0/0:1,0:1:3.01:0,3,62	0/1:33,0:33:97.30:97,0,732	0/0:3,0:3:5.79:0,6,47	0/1:9,1:10:1.87:2,0,184	0/1:5,3:8:50.90:51,0,119	0/0:4,0:4:11.95:0,12,120	0/0:6,0:6:18.05:0,18,337	0/0:4,0:4:12.04:0,12,245	0/1:4,1:5:10.08:10,0,88	0/0:6,0:6:14.82:0,15,138	0/0:14,0:14:42.11:0,42,1016	0/0:11,0:11:30.06:0,30,321	0/0:5,0:5:15.05:0,15,430	0/0:14,0:14:42.10:0,42,942	0/0:6,0:6:15.05:0,15,403	./.	0/0:3,0:3:8.99:0,9,132	./.	0/1:12,1:13:26.36:26,0,198	0/0:16,0:16:48.15:0,48,1257	0/0:20,0:19:57.17:0,57,1499	0/0:4,0:4:12.03:0,12,160
chr10	93676313	.	A	AT	2288.76	PASS	AB=0.675;AC=23;AF=0.442;AN=52;BaseQRankSum=1.209;DP=230;FS=11.215;HRun=4;HaplotypeScore=52.8894;InbreedingCoeff=0.1350;MQ=64.67;MQ0=1;MQRankSum=-1.979;QD=15.78;ReadPosRankSum=3.208;VQSLOD=2.0474;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:15.05:0,15,208	0/1:1,2:3:1.82:62,0,2	0/0:3,0:3:5.99:0,6,68	0/0:3,0:3:6.29:0,6,44	0/1:8,4:12:32.70:215,0,33	0/1:4,0:14:47.09:47,0,90	1/1:1,0:2:4.82:35,5,0	1/1:10,22:32:5.44:762,5,0	0/1:2,1:3:18.31:26,0,18	1/1:4,6:10:16.99:278,17,0	0/1:4,4:8:16.90:155,0,17	0/1:4,0:5:28.96:29,0,32	0/1:1,0:6:12.66:13,0,28	0/1:1,0:4:6.37:6,0,32	0/1:4,2:6:9.99:51,0,10	1/1:1,5:6:4.39:156,4,0	0/0:15,0:15:42.13:0,42,563	1/1:3,8:11:15.71:246,16,0	0/0:5,0:5:15.05:0,15,210	0/0:13,0:13:39.12:0,39,521	0/0:6,0:6:15.05:0,15,208	./.	0/1:2,0:3:0.23:0,0,35	./.	0/1:6,8:14:14.79:228,0,15	0/0:15,0:15:45.15:0,45,628	0/0:19,0:18:54.18:0,54,749	1/1:2,2:4:12.03:147,12,0
chr10	93676548	.	T	TC	2891.69	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.243;DP=486;FS=4.658;HRun=7;HaplotypeScore=52.4572;InbreedingCoeff=0.8786;MQ=79.90;MQ0=0;MQRankSum=0.956;QD=27.28;ReadPosRankSum=0.628;VQSLOD=4.3036;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:5.78:0,6,170	0/0:7,0:7:21.02:0,21,196	0/0:15,0:15:21.92:0,22,240	0/0:21,0:21:19.75:0,20,288	0/0:23,0:23:69.08:0,69,654	0/0:20,0:20:57.04:0,57,530	0/0:16,0:16:45.05:0,45,425	0/0:37,0:37:99:0,99,932	0/0:18,0:18:54.08:0,54,517	0/0:14,0:14:36.05:0,36,347	0/0:14,0:14:32.25:0,32,291	0/0:15,0:15:38.71:0,39,349	0/0:21,0:21:63.10:0,63,608	0/0:12,0:12:32.99:0,33,307	0/0:17,0:17:51.07:0,51,484	0/0:11,0:11:33.04:0,33,312	0/0:20,0:20:0.18:0,0,92	0/0:11,0:11:27.04:0,27,260	1/1:3,10:13:30.02:334,30,0	1/1:3,26:29:78.49:869,78,0	1/1:3,10:13:30.09:361,30,0	0/0:17,0:17:45.05:0,45,429	0/0:14,0:14:39.04:0,39,366	0/0:7,0:7:18.03:0,18,174	0/0:18,0:18:54.09:0,54,521	1/1:2,17:19:51.14:593,51,0	1/1:1,30:32:52.31:908,52,0	0/0:2,0:2:3:0,3,29
chr10	93677181	.	A	ATT	73.26	PASS	AB=0.931;AC=6;AF=0.107;AN=56;BaseQRankSum=-0.552;DP=608;FS=21.951;HRun=0;HaplotypeScore=144.0946;InbreedingCoeff=-0.1476;MQ=61.64;MQ0=19;MQRankSum=1.344;QD=0.65;ReadPosRankSum=-3.952;VQSLOD=-0.4391;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:51.33:0,51,702	0/0:10,0:10:29.87:0,30,337	0/0:58,0:12:18.01:0,18,275	0/0:56,0:20:20.56:0,21,185	0/0:28,0:28:56.95:0,57,666	0/0:22,0:22:45.08:0,45,472	0/0:16,0:16:4.23:0,4,250	0/0:29,0:28:3.76:0,4,552	0/0:10,0:10:23.73:0,24,269	0/0:25,0:25:29.79:0,30,706	0/0:36,0:36:60.04:0,60,987	0/0:11,0:11:10.17:0,10,244	0/0:22,0:21:2.14:0,2,478	0/0:16,0:16:14.71:0,15,297	0/0:16,0:16:22.27:0,22,219	0/0:12,0:12:30.04:0,30,365	0/0:22,0:22:45.14:0,45,610	0/1:15,0:15:1.65:2,0,295	0/0:11,0:9:17.08:0,17,199	0/1:27,0:28:77.76:78,0,543	0/1:6,4:11:23.39:23,0,112	0/0:9,0:9:11.40:0,11,229	0/0:28,0:27:15.70:0,16,544	0/1:10,0:10:3.64:4,0,85	0/0:25,0:25:3.99:0,4,534	0/1:21,0:21:43.99:44,0,393	0/1:25,2:26:33.16:33,0,481	0/0:10,0:8:1.61:0,2,82
chr10	93677693	.	A	AT	737.14	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.931;DP=542;FS=3.716;HRun=9;HaplotypeScore=73.9445;InbreedingCoeff=0.9773;MQ=75.08;MQ0=0;MQRankSum=-1.448;QD=21.68;ReadPosRankSum=1.039;VQSLOD=4.5427;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:16:26.26:427,26,0	0/0:4,0:4:12:0,12,104	0/0:18,0:18:33.83:0,34,246	0/0:16,0:15:16.99:0,17,171	0/0:33,0:33:83.95:0,84,722	0/0:17,0:16:38.95:0,39,334	0/0:12,0:12:26.99:0,27,234	0/0:36,0:36:89.94:0,90,778	0/0:15,0:15:44.99:0,45,390	0/0:18,0:18:50.99:0,51,443	0/0:20,0:20:47.98:0,48,417	0/0:24,0:24:71.98:0,72,623	0/0:19,0:19:53.99:0,54,469	0/0:20,0:20:53.98:0,54,469	0/0:12,0:12:35.99:0,36,312	0/0:15,0:15:41.99:0,42,364	1/1:1,17:18:39.11:431,39,0	0/0:14,0:14:32.98:0,33,286	0/0:21,0:21:56.94:0,57,487	0/0:29,0:29:77.97:0,78,677	0/0:16,0:16:47.99:0,48,417	0/0:19,0:19:44.95:0,45,384	0/0:31,0:31:74.96:0,75,651	0/0:11,0:11:29.98:0,30,260	0/0:17,0:17:47.99:0,48,417	0/0:27,0:27:65.98:0,66,573	0/0:29,0:29:77.95:0,78,669	0/0:15,0:15:44.99:0,45,391
chr10	93679835	.	GC	G	18797.49	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=10.554;DP=680;FS=34.868;HRun=3;HaplotypeScore=121.0165;InbreedingCoeff=0.9900;MQ=82.69;MQ0=0;MQRankSum=-4.422;QD=33.57;ReadPosRankSum=2.044;VQSLOD=2.3151;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,129,1773	1/1:0,5:5:15.05:186,15,0	0/0:20,0:20:55.42:0,55,760	0/0:20,0:20:54.15:0,54,681	1/1:0,21:21:60.19:743,60,0	1/1:1,35:36:93.29:1153,93,0	1/1:0,29:29:78.25:967,78,0	1/1:1,29:30:84.23:1005,84,0	1/1:2,24:26:72.23:889,72,0	1/1:0,25:25:75.24:929,75,0	1/1:0,16:16:42.13:515,42,0	1/1:0,21:21:57.18:706,57,0	1/1:0,23:23:60.19:744,60,0	1/1:1,24:25:69.22:854,69,0	1/1:0,32:32:93.29:1152,93,0	1/1:1,22:23:60.19:744,60,0	0/0:34,0:34:99:0,102,1445	1/1:0,27:27:78.20:948,78,0	1/1:1,27:29:81.14:939,81,0	1/1:2,12:14:33.10:408,33,0	1/1:3,39:42:99:1372,111,0	1/1:1,7:8:21.07:260,21,0	1/1:0,16:16:39.12:483,39,0	1/1:0,26:26:75.24:930,75,0	1/1:1,20:21:60.12:724,60,0	1/1:2,27:29:81.25:1003,81,0	1/1:1,30:31:78.24:959,78,0	1/1:0,5:5:15.05:186,15,0
chr10	93681246	.	C	CAAAACAA	37515.87	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=12.036;DP=543;FS=1.420;HRun=0;HaplotypeScore=208.0180;InbreedingCoeff=0.9860;MQ=62.90;MQ0=0;MQRankSum=-14.332;QD=83.18;ReadPosRankSum=0.715;VQSLOD=5.0465;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.26:0,75,1988	1/1:3,16:19:57.20:1810,57,0	0/0:22,0:22:51.15:0,51,1241	0/0:23,0:23:69.22:0,69,1729	1/1:8,21:29:69.19:1887,69,0	1/1:8,12:20:57.19:1679,57,0	1/1:7,12:19:57.20:1810,57,0	1/1:12,7:19:54.17:1381,54,0	1/1:3,10:14:42.14:1300,42,0	1/1:13,16:29:81.17:2295,81,0	1/1:9,14:23:69.24:2049,69,0	1/1:4,11:15:42.13:1192,42,0	1/1:4,12:16:48.16:1525,48,0	1/1:6,9:15:33.11:1035,33,0	1/1:8,15:23:63.22:1996,63,0	1/1:9,7:16:48.16:1510,48,0	0/0:21,0:21:60.21:0,60,1616	1/1:2,3:5:12.04:373,12,0	1/1:6,5:11:30.10:879,30,0	1/1:10,18:28:84.29:2580,84,0	1/1:7,4:11:27.09:853,27,0	1/1:4,18:22:63.22:1878,63,0	1/1:6,11:17:44.94:1267,45,0	1/1:5,8:13:24.08:680,24,0	1/1:6,17:23:69.24:2012,69,0	1/1:11,20:31:87.30:2728,87,0	1/1:13,15:28:78.27:2287,78,0	1/1:0,5:5:15.05:510,15,0
chr10	93681247	.	ACTGGGG	A	16745.60	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=14.047;DP=479;FS=0.893;HRun=0;HaplotypeScore=240.2243;InbreedingCoeff=0.9824;MQ=64.93;MQ0=0;MQRankSum=-14.443;QD=43.16;ReadPosRankSum=1.987;VQSLOD=4.1351;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.26:0,75,2823	1/1:16,2:18:54.13:726,54,0	0/0:22,0:22:66.17:0,66,2123	0/0:23,0:23:69.23:0,69,2466	1/1:21,4:25:64.59:1113,65,0	1/1:12,3:15:42.10:605,42,0	1/1:12,6:18:54.13:850,54,0	1/1:7,9:16:48.12:798,48,0	1/1:11,1:12:35.96:383,36,0	1/1:16,10:26:78.13:1255,78,0	1/1:14,6:20:59.92:1144,60,0	1/1:12,0:13:38.74:367,39,0	1/1:12,1:13:39.07:432,39,0	1/1:9,4:13:33.05:405,33,0	1/1:15,5:20:57.12:794,57,0	1/1:7,6:13:39.10:671,39,0	0/0:21,0:21:60.21:0,60,2204	1/1:3,2:5:12.04:197,12,0	1/1:5,3:8:21.07:344,21,0	1/1:18,8:26:78.19:1225,78,0	1/1:4,4:8:21.06:399,21,0	1/1:18,3:21:60.11:889,60,0	1/1:11,3:14:35.65:546,36,0	1/1:8,1:9:17.93:142,18,0	1/1:17,3:20:60.16:1095,60,0	1/1:21,5:26:75.23:1097,75,0	1/1:15,9:24:66.17:1087,66,0	1/1:5,0:5:15.05:182,15,0
chr10	93681248	.	CTGGGG	C	14919.95	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=14.499;DP=478;FS=0.901;HRun=0;HaplotypeScore=237.3373;InbreedingCoeff=0.9836;MQ=64.94;MQ0=0;MQRankSum=-14.426;QD=38.55;ReadPosRankSum=2.042;VQSLOD=4.6775;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.26:0,75,2498	1/1:2,16:18:54.18:756,54,0	0/0:22,0:22:63.19:0,63,1872	0/0:23,0:23:69.10:0,69,2192	1/1:4,21:25:66.12:769,66,0	1/1:3,12:15:41.87:552,42,0	1/1:6,12:18:54.18:722,54,0	1/1:9,7:16:45.12:630,45,0	1/1:1,11:12:36.12:488,36,0	1/1:10,16:26:78.24:1165,78,0	1/1:6,14:20:60.16:725,60,0	1/1:0,12:12:36.10:494,36,0	1/1:1,12:13:39.13:545,39,0	1/1:4,9:13:33.11:442,33,0	1/1:5,15:20:57.18:768,57,0	1/1:6,7:13:39.13:527,39,0	0/0:21,0:21:60.21:0,60,1911	1/1:2,3:5:12.04:196,12,0	1/1:3,5:8:21.07:330,21,0	1/1:8,18:26:78.14:991,78,0	1/1:4,4:8:21.07:282,21,0	1/1:3,18:21:60.18:754,60,0	1/1:3,11:14:35.68:439,36,0	1/1:2,8:10:21.02:242,21,0	1/1:3,17:20:60.19:792,60,0	1/1:5,20:25:75.25:1157,75,0	1/1:9,15:24:66.22:907,66,0	1/1:0,5:5:15.05:246,15,0
chr10	93681855	.	GA	G	3968.75	PASS	AB=0.991;AC=32;AF=0.571;AN=56;BaseQRankSum=-3.363;DP=467;FS=2.742;HRun=1;HaplotypeScore=143.2926;InbreedingCoeff=0.2516;MQ=68.42;MQ0=1;MQRankSum=-1.907;QD=10.84;ReadPosRankSum=-3.259;VQSLOD=0.7732;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.18:0,63,948	1/1:0,3:3:8.97:70,9,0	0/0:13,0:10:9.03:0,9,159	0/0:14,0:9:7.06:0,7,47	1/1:6,20:26:56.52:435,57,0	0/1:18,0:19:23.66:29,0,24	0/1:19,0:21:8.75:98,0,9	1/1:13,14:27:64.79:514,65,0	1/1:0,20:20:41.83:328,42,0	1/1:8,14:22:56.76:412,57,0	1/1:3,19:22:47.45:361,47,0	0/1:12,0:12:31.58:32,0,42	0/1:16,0:17:2.84:3,0,49	0/1:15,0:15:31.25:31,0,39	1/1:5,12:17:39.80:294,40,0	1/1:5,17:22:60.99:450,61,0	0/0:18,0:18:51.07:0,51,734	1/1:9,7:17:39.16:261,39,0	0/1:19,2:21:79.43:79,0,89	0/0:14,0:14:9.25:0,9,98	0/0:12,0:12:3.25:0,3,64	0/1:14,0:15:30.05:30,0,51	0/1:7,0:7:10.92:11,0,26	0/0:9,0:9:9.34:0,9,35	1/1:2,19:21:48.84:388,49,0	0/1:12,0:12:11.18:11,0,68	0/1:21,0:21:9.83:10,0,132	1/1:0,9:9:14.97:120,15,0
chr10	93681863	.	TAAA	T	5522.24	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=2.418;DP=447;FS=5.818;HRun=10;HaplotypeScore=157.7300;InbreedingCoeff=0.9391;MQ=68.90;MQ0=1;MQRankSum=0.435;QD=18.53;ReadPosRankSum=1.349;VQSLOD=1.7817;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.17:0,60,855	1/1:3,0:3:8.94:78,9,0	0/0:18,0:13:11.46:0,11,237	0/0:15,0:9:11.15:0,11,138	1/1:25,4:30:60.50:565,61,0	1/1:18,0:18:33.19:233,33,0	1/1:14,2:16:19.58:182,20,0	1/1:21,1:22:28.07:302,28,0	1/1:15,3:18:53.83:519,54,0	1/1:24,0:24:32.26:498,32,0	1/1:17,1:18:20.84:263,21,0	1/1:8,1:9:9.09:94,9,0	1/1:17,1:18:34.24:288,34,0	1/1:11,2:13:9.68:183,10,0	1/1:16,0:16:31.65:377,32,0	1/1:20,2:22:53.61:471,54,0	0/0:16,0:16:39.13:0,39,599	1/1:11,1:12:27.03:281,27,0	0/0:17,0:17:41.25:0,41,299	0/0:18,0:18:22.89:0,23,242	0/0:13,0:13:10.63:0,11,182	1/1:13,2:15:33.39:263,33,0	1/1:7,0:7:13.60:111,14,0	1/1:9,1:10:8.59:90,9,0	1/1:17,2:21:62.36:547,62,0	0/0:12,0:12:25.76:0,26,225	0/0:19,0:19:51.10:0,51,383	1/1:5,1:6:17.98:175,18,0
chr10	93682037	.	GA	G	7224.26	PASS	AB=0.783;AC=52;AF=0.929;AN=56;BaseQRankSum=-1.806;DP=550;FS=4.626;HRun=13;HaplotypeScore=104.8175;InbreedingCoeff=0.3238;MQ=68.77;MQ0=0;MQRankSum=-0.126;QD=13.66;ReadPosRankSum=4.297;VQSLOD=4.9176;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,18:27:51.79:362,52,0	1/1:2,1:3:2.97:22,3,0	0/0:21,0:13:8.58:0,9,59	0/1:17,0:12:11.61:12,0,35	1/1:3,14:19:39.83:274,40,0	1/1:3,20:27:67.78:461,68,0	1/1:3,10:14:5.63:190,6,0	1/1:11,18:30:25.77:327,26,0	1/1:4,17:21:30.34:349,30,0	1/1:5,13:20:39.79:274,40,0	1/1:6,12:20:33.88:230,34,0	1/1:5,15:20:41.70:304,42,0	1/1:7,19:27:61.65:442,62,0	1/1:1,19:20:47.39:350,47,0	1/1:2,15:18:40.79:289,41,0	1/1:3,15:19:46.39:322,46,0	1/1:4,15:20:31.94:279,32,0	1/1:2,16:18:16.05:294,16,0	1/1:9,11:20:10.90:216,11,0	1/1:5,26:37:35.12:468,35,0	1/1:7,11:20:30.18:208,30,0	1/1:2,10:13:31.85:223,32,0	1/1:4,18:23:52.73:377,53,0	0/1:3,9:13:0.29:152,0,0	1/1:6,13:20:37.77:268,38,0	1/1:7,11:18:6.74:212,7,0	1/1:6,14:20:1.06:277,1,0	1/1:3,2:5:5.95:44,6,0
chr10	93682908	.	C	CA	12087.25	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.430;DP=667;FS=0.000;HRun=7;HaplotypeScore=100.5792;InbreedingCoeff=0.9953;MQ=82.90;MQ0=0;MQRankSum=-9.093;QD=19.16;ReadPosRankSum=4.561;VQSLOD=4.0293;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:51.16:616,51,0	1/1:16,0:16:44.61:321,45,0	0/0:25,0:25:55.62:0,56,519	0/0:11,0:11:30.05:0,30,289	1/1:38,0:38:99:741,107,0	1/1:27,0:27:74.33:524,74,0	1/1:21,0:21:62.34:425,62,0	1/1:34,0:34:91.10:552,91,0	1/1:21,0:21:50.45:340,50,0	1/1:33,0:33:93.93:580,94,0	1/1:20,0:20:47.55:334,48,0	1/1:27,0:27:80.13:541,80,0	1/1:23,0:23:65.29:440,65,0	1/1:23,0:23:59.41:413,59,0	1/1:37,0:37:89.04:602,89,0	1/1:21,0:21:50.45:340,50,0	1/1:3,24:27:69.21:834,69,0	1/1:14,0:14:41.60:291,42,0	1/1:19,0:19:53.20:350,53,0	1/1:30,0:30:83.12:564,83,0	1/1:16,0:16:38.61:263,39,0	1/1:30,0:30:83.18:578,83,0	1/1:23,0:23:59.46:418,59,0	1/1:18,0:18:47.61:334,48,0	1/1:33,0:33:88.88:586,89,0	1/1:28,0:28:82.38:503,82,0	1/1:24,0:24:68.36:475,68,0	1/1:8,0:8:17.85:125,18,0
chr10	93682911	.	A	AT	24371.35	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=-8.688;DP=684;FS=0.000;HRun=0;HaplotypeScore=58.5660;InbreedingCoeff=0.6424;MQ=83.20;MQ0=0;MQRankSum=-8.295;QD=37.67;ReadPosRankSum=6.751;VQSLOD=4.2640;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:70.22:110,0,70	1/1:0,18:18:45.15:672,45,0	0/0:24,0:24:68.96:0,69,838	0/0:13,0:13:33.09:0,33,441	1/1:0,39:39:99:1616,108,0	1/1:0,31:31:75.25:1121,75,0	1/1:1,21:22:63.21:934,63,0	1/1:1,33:34:99:1437,99,0	1/1:0,20:20:54.11:781,54,0	1/1:0,34:34:99:1484,102,0	1/1:0,19:19:51.08:734,51,0	1/1:0,28:28:81.27:1212,81,0	1/1:0,24:24:66.22:988,66,0	1/1:0,22:22:60.20:897,60,0	1/1:1,36:37:90.30:1347,90,0	1/1:0,20:20:51.17:763,51,0	0/1:27,0:27:8.12:157,0,8	1/1:1,15:16:42.14:628,42,0	1/1:0,19:19:54.18:806,54,0	1/1:0,30:30:84.28:1257,84,0	1/1:0,17:17:39.13:584,39,0	1/1:0,30:30:87.21:1271,87,0	1/1:0,22:22:60.20:897,60,0	1/1:0,19:19:48.16:718,48,0	1/1:0,32:32:90.30:1347,90,0	1/1:1,30:31:90.27:1307,90,0	1/1:0,25:25:69.23:1032,69,0	1/1:0,7:7:18.06:269,18,0
chr10	93683012	.	AG	A	1903.92	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.193;DP=669;FS=0.528;HRun=2;HaplotypeScore=61.5596;InbreedingCoeff=0.9998;MQ=86.87;MQ0=0;MQRankSum=-5.005;QD=34.62;ReadPosRankSum=1.963;VQSLOD=3.9833;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:81.26:1052,81,0	0/0:11,0:11:33.08:0,33,471	0/0:27,0:27:75.25:0,75,1089	0/0:18,0:18:48.16:0,48,691	0/0:26,0:26:78.26:0,78,1168	0/0:19,0:19:57.19:0,57,854	0/0:19,0:19:57.18:0,57,835	0/0:27,0:26:81.27:0,81,1197	0/0:19,0:19:57.19:0,57,854	0/0:29,0:29:87.28:0,87,1267	0/0:14,0:14:39.13:0,39,584	0/0:24,0:24:69.23:0,69,1016	0/0:28,0:28:84.28:0,84,1258	0/0:16,0:16:48.16:0,48,718	0/0:39,0:39:99:0,117,1752	0/0:20,0:20:60.19:0,60,879	1/1:0,25:25:75.24:974,75,0	0/0:25,0:25:75.20:0,75,1074	0/0:14,0:14:42.14:0,42,629	0/0:30,0:30:87.28:0,87,1285	0/0:31,0:31:87.29:0,87,1303	0/0:26,0:26:78.26:0,78,1150	0/0:30,0:30:90.29:0,90,1328	0/0:17,0:17:51.17:0,51,764	0/0:27,0:27:81.27:0,81,1214	0/0:32,0:32:96.33:0,96,1439	0/0:29,0:29:87.28:0,87,1285	0/0:17,0:17:48.16:0,48,719
chr10	93683521	.	AAAATAAAT	A	2337.98	PASS	AB=0.800;AC=25;AF=0.595;AN=42;BaseQRankSum=-0.702;DP=252;FS=7.639;HRun=0;HaplotypeScore=81.6146;InbreedingCoeff=0.4623;MQ=67.68;MQ0=4;MQRankSum=-2.625;QD=16.12;ReadPosRankSum=0.054;VQSLOD=1.5735;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:7:5.99:0,6,49	1/1:3,1:4:3.01:75,3,0	./.	0/0:13,0:7:0.47:0,0,1	1/1:4,1:5:3.01:75,3,0	0/0:5,0:8:12:0,12,125	./.	1/1:26,0:26:6.01:75,6,0	1/1:3,3:6:9.03:225,9,0	1/1:7,6:13:18.06:449,18,0	./.	./.	0/0:5,0:7:2.99:0,3,24	0/0:5,0:6:5.98:0,6,47	1/1:9,3:12:3.01:75,3,0	./.	1/1:5,0:8:6.02:112,6,0	0/1:9,3:12:15.98:69,0,16	1/1:8,5:12:15.03:324,15,0	1/1:5,1:6:3.01:75,3,0	0/0:5,0:5:1.82:0,2,5	./.	0/0:7,0:7:3.01:0,3,49	./.	1/1:6,7:13:21.07:525,21,0	1/1:10,3:13:7.47:168,7,0	1/1:11,3:14:9.03:224,9,0	0/0:8,0:8:0.47:0,0,1
chr10	93683677	.	GT	G	4604.86	PASS	AB=0.785;AC=46;AF=0.852;AN=54;BaseQRankSum=-0.232;DP=334;FS=6.949;HRun=11;HaplotypeScore=76.9872;InbreedingCoeff=0.6513;MQ=70.46;MQ0=3;MQRankSum=-5.480;QD=17.38;ReadPosRankSum=1.208;VQSLOD=5.8193;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:13:11.60:0,12,75	1/1:2,6:8:23.33:178,23,0	0/1:22,1:16:4.40:4,0,80	0/0:26,0:16:17.57:0,18,156	1/1:2,16:18:38.64:303,39,0	1/1:7,11:18:47.81:378,48,0	1/1:3,3:6:11.82:88,12,0	1/1:8,24:32:80.65:646,81,0	1/1:4,4:7:17.86:133,18,0	1/1:5,9:14:32.91:263,33,0	1/1:2,11:14:35:281,35,0	1/1:1,1:2:5.97:46,6,0	1/1:1,5:6:17.91:140,18,0	1/1:2,2:4:8.98:76,9,0	1/1:3,9:12:24.84:216,25,0	1/1:0,2:2:5.99:49,6,0	0/0:4,0:28:48.93:0,49,287	1/1:4,7:10:20.85:160,21,0	1/1:3,9:13:13.70:244,14,0	1/1:7,15:22:59.85:479,60,0	1/1:2,2:4:8.69:53,9,0	1/1:1,1:2:2.98:25,3,0	1/1:2,6:8:20.92:166,21,0	./.	0/1:4,7:11:2.59:148,0,3	1/1:6,6:12:23.92:190,24,0	1/1:2,6:8:23.94:192,24,0	1/1:1,6:7:17.96:147,18,0
chr10	93683705	.	CAGTG	C	12917.43	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=2.685;DP=298;FS=1.303;HRun=0;HaplotypeScore=72.7189;InbreedingCoeff=0.7335;MQ=71.70;MQ0=1;MQRankSum=-8.759;QD=51.06;ReadPosRankSum=2.154;VQSLOD=5.4762;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:27.09:0,27,781	1/1:1,7:8:24.08:489,24,0	0/0:11,0:11:29.59:0,30,750	0/1:14,0:11:19.69:20,0,590	1/1:0,15:15:39.13:789,39,0	1/1:2,12:14:42.12:804,42,0	1/1:0,6:6:18.06:377,18,0	1/1:3,21:24:69.20:1278,69,0	1/1:0,8:8:18.06:377,18,0	1/1:0,8:8:24.08:503,24,0	1/1:2,20:22:57.18:1115,57,0	1/1:0,6:6:18.06:330,18,0	1/1:1,4:5:15.05:314,15,0	1/1:1,2:3:9.03:188,9,0	1/1:0,10:10:30.10:610,30,0	1/1:0,3:3:9.03:188,9,0	0/0:21,0:21:57.20:0,57,1629	1/1:1,8:8:21.07:395,21,0	1/1:1,12:13:36.11:718,36,0	1/1:0,18:18:54.19:1099,54,0	1/1:0,4:4:9.50:188,10,0	1/1:0,5:5:15.05:302,15,0	1/1:2,8:10:30.07:538,30,0	1/1:0,2:2:3.01:63,3,0	1/1:0,8:8:21.07:429,21,0	1/1:0,14:14:39.11:777,39,0	1/1:0,10:10:21.07:429,21,0	1/1:0,14:14:30.10:599,30,0
chr10	93685394	.	ATGTGTGTGTGTGTGTGTGTGTG	A	6954.69	PASS	AB=1.000;AC=34;AF=0.708;AN=48;BaseQRankSum=6.475;DP=489;FS=4.692;HRun=0;HaplotypeScore=229.8101;InbreedingCoeff=0.2428;MQ=55.38;MQ0=12;MQRankSum=-1.425;QD=25.29;ReadPosRankSum=3.261;VQSLOD=3.2073;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:6,0:6:3.01:166,3,0	0/0:24,0:12:18.05:0,18,570	0/0:27,0:11:9.91:0,10,436	./.	1/1:16,0:16:12.04:633,12,0	1/1:18,0:18:2.56:157,3,0	0/0:20,0:20:14.95:0,15,123	1/1:14,0:14:9.48:357,9,0	0/1:12,0:12:22.07:641,0,22	0/0:14,0:14:2.99:0,3,25	1/1:12,0:12:12.04:629,12,0	1/1:15,0:15:9.03:372,9,0	1/1:15,0:15:3.01:158,3,0	1/1:26,0:24:15.05:825,15,0	1/1:8,0:8:6.02:333,6,0	1/1:8,6:14:3.01:154,3,0	0/1:13,0:13:57.98:150,0,58	0/1:14,0:14:29.98:317,0,30	./.	./.	1/1:13,0:13:3.01:158,3,0	0/0:19,0:19:0.47:0,0,1	1/1:23,0:23:9.03:475,9,0	1/1:15,0:15:3.01:166,3,0	1/1:22,0:22:2.50:849,3,0	0/1:11,0:11:16.98:97,0,17	1/1:7,0:7:6.02:317,6,0
chr10	93685415	.	TGTGTGTGTGTGTGTGTGTGTGTGC	T	7311.18	PASS	AB=0.993;AC=34;AF=0.680;AN=50;BaseQRankSum=7.070;DP=448;FS=3.101;HRun=0;HaplotypeScore=181.5147;InbreedingCoeff=0.1242;MQ=43.81;MQ0=23;MQRankSum=-1.702;QD=26.39;ReadPosRankSum=4.230;VQSLOD=3.8549;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:5,0:4:3.01:138,3,0	0/0:18,0:6:18.05:0,18,585	0/0:23,0:4:8.94:0,9,436	./.	1/1:2,11:13:12.04:794,12,0	1/1:5,17:22:2.79:198,3,0	0/1:16,0:14:5.84:6,0,103	1/1:14,0:14:9.48:301,9,0	0/1:12,0:11:13.95:573,0,14	0/0:14,0:14:3:0,3,25	1/1:3,3:6:12.04:773,12,0	1/1:2,12:14:9.03:473,9,0	1/1:2,12:14:3.01:199,3,0	1/1:22,1:21:15.05:750,15,0	1/1:10,0:10:6.49:277,6,0	1/1:12,0:11:2.19:174,2,0	0/1:12,0:12:57.98:124,0,58	0/1:12,0:9:24.36:305,0,24	0/0:20,0:20:0.47:0,0,1	./.	1/1:2,7:9:3.48:199,3,0	0/0:5,11:16:0.47:0,0,1	1/1:7,18:24:9.03:595,9,0	1/1:15,0:14:3.01:138,3,0	0/1:23,1:24:99:832,0,213	0/1:14,0:14:16.98:67,0,17	1/1:3,2:5:6.02:398,6,0
chr10	93685417	.	TGTGTGTGTGTGTGTGTGTGTGC	T	8031.91	PASS	AB=0.681;AC=38;AF=0.731;AN=52;BaseQRankSum=5.715;DP=421;FS=4.307;HRun=0;HaplotypeScore=156.7960;InbreedingCoeff=0.3489;MQ=44.85;MQ0=25;MQRankSum=-0.388;QD=30.08;ReadPosRankSum=3.595;VQSLOD=3.5343;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:5.78:0,6,47	1/1:3,2:4:3.01:185,3,0	0/0:17,0:6:15.05:0,15,428	0/0:23,0:4:8.79:0,9,359	./.	1/1:11,0:11:12.04:653,12,0	1/1:18,0:17:2.72:162,3,0	1/1:15,0:13:23.77:164,24,0	1/1:6,7:13:8.98:388,9,0	1/1:3,8:10:20.97:805,21,0	0/1:2,10:12:0:0,0,0	1/1:4,0:4:12.04:653,12,0	1/1:12,0:12:9.50:369,10,0	1/1:12,0:12:3.01:163,3,0	1/1:8,14:21:15.05:901,15,0	1/1:3,8:11:6.91:370,7,0	0/1:12,0:11:12.83:133,0,13	0/1:5,6:11:2.36:179,0,2	1/1:7,7:10:17.86:463,18,0	0/0:3,18:21:0.94:0,1,2	./.	1/1:8,0:8:3.01:164,3,0	0/0:11,0:11:0.47:0,0,1	1/1:20,0:19:9.03:489,9,0	1/1:7,6:12:3.01:184,3,0	0/1:3,21:24:99:1139,0,152	1/1:1,13:14:2.99:121,3,0	1/1:5,0:5:8.99:347,9,0
chr10	93685618	.	G	GCAGATAACTACTACGAAG	33327.64	PASS	AB=0.764;AC=53;AF=0.946;AN=56;BaseQRankSum=-7.397;DP=338;FS=21.744;HRun=0;HaplotypeScore=424.1025;InbreedingCoeff=-0.0848;MQ=72.40;MQ0=0;MQRankSum=0.061;QD=98.60;ReadPosRankSum=-0.669;VQSLOD=3.5800;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:26.75:1830,27,0	1/1:4,0:4:8.57:630,9,0	0/1:6,1:13:22.81:1760,0,23	0/1:4,0:9:2.02:859,0,2	1/1:11,0:11:6.26:602,6,0	1/1:17,0:17:26.27:1596,26,0	1/1:13,0:13:5.18:971,5,0	1/1:21,0:21:63.21:3089,63,0	1/1:11,0:11:14.93:877,15,0	1/1:11,0:11:33.10:1501,33,0	0/1:12,0:12:22.48:1374,0,22	1/1:21,0:21:18.30:1406,18,0	1/1:15,0:15:18.45:1188,18,0	1/1:12,0:12:30.04:1352,30,0	1/1:12,0:12:14.97:1014,15,0	1/1:10,0:10:12:952,12,0	1/1:10,0:10:5.92:624,6,0	1/1:11,0:11:10.34:990,10,0	1/1:15,0:14:15.31:1331,15,0	1/1:4,0:4:3.39:401,3,0	1/1:13,0:13:39.09:1330,39,0	1/1:10,0:10:16.22:1072,16,0	1/1:11,0:10:15.18:799,15,0	1/1:3,0:3:6.49:130,6,0	1/1:12,0:12:32.39:1740,32,0	1/1:13,0:12:26.54:1365,27,0	1/1:16,0:16:36.21:2404,36,0	1/1:2,0:2:6.02:141,6,0
chr10	93685619	.	C	CAGATAACTACT	21347.08	PASS	AB=0.922;AC=50;AF=0.893;AN=56;BaseQRankSum=-6.871;DP=323;FS=1.548;HRun=0;HaplotypeScore=405.5321;InbreedingCoeff=-0.1356;MQ=58.73;MQ0=0;MQRankSum=-0.630;QD=66.09;ReadPosRankSum=-1.682;VQSLOD=3.5923;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:8.78:1012,9,0	1/1:4,0:4:7.38:415,7,0	0/1:4,1:7:40.86:692,0,41	0/1:4,0:5:14.06:288,0,14	0/1:11,0:11:5.64:254,0,6	1/1:16,0:16:33.39:1069,33,0	0/1:12,0:12:7.93:684,0,8	1/1:21,0:21:58.10:2119,58,0	1/1:11,0:11:7.07:576,7,0	1/1:11,0:11:11.89:866,12,0	0/1:12,0:12:19.04:878,0,19	1/1:21,0:21:24.61:930,25,0	1/1:13,0:13:21.59:760,22,0	1/1:12,0:12:25.65:899,26,0	1/1:12,0:12:22.22:701,22,0	1/1:10,0:10:5.36:698,5,0	0/1:10,0:10:0.80:468,0,1	1/1:11,0:11:4.32:745,4,0	1/1:13,0:14:28.51:1164,29,0	1/1:4,0:4:8.70:147,9,0	1/1:13,0:13:38.30:1107,38,0	1/1:10,0:10:22.97:721,23,0	1/1:11,0:10:12.11:575,12,0	1/1:3,0:3:7.84:135,8,0	1/1:12,0:12:28.99:1143,29,0	1/1:13,0:12:22.88:731,23,0	1/1:15,0:15:28.91:1429,29,0	1/1:2,0:2:6.02:141,6,0
chr10	93685929	.	AAG	A	297.52	PASS	AB=0.879;AC=8;AF=0.148;AN=54;BaseQRankSum=-3.894;DP=289;FS=5.438;HRun=0;HaplotypeScore=47.6491;InbreedingCoeff=0.2938;MQ=54.42;MQ0=29;MQRankSum=-2.360;QD=3.91;ReadPosRankSum=-0.140;VQSLOD=1.3482;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:16:27.41:0,27,338	0/0:3,0:2:3.01:0,3,37	0/0:50,0:12:23.07:0,23,399	0/0:26,0:9:24.26:0,24,218	0/0:5,0:5:2.96:0,3,19	1/1:8,2:7:10.82:134,11,0	0/0:6,0:5:2.22:0,2,7	0/0:5,0:5:11.87:0,12,79	0/0:4,0:3:2.99:0,3,23	0/0:5,0:4:5.94:0,6,40	0/0:6,0:5:8.98:0,9,85	0/0:7,0:7:3.93:0,4,12	./.	0/1:9,3:11:9.63:176,0,10	0/0:9,0:8:11.98:0,12,120	0/0:5,0:5:5.97:0,6,50	0/1:44,2:44:13.49:13,0,195	0/0:5,0:4:9.03:0,9,105	0/0:9,0:7:14.93:0,15,141	0/0:5,0:5:2.84:0,3,14	0/0:2,0:2:2.84:0,3,14	1/1:2,1:3:5.95:61,6,0	0/0:5,0:5:5.19:0,5,27	1/1:4,1:4:0.91:38,1,0	0/0:3,0:3:5.98:0,6,56	0/0:10,0:8:20.78:0,21,143	0/0:10,0:8:19.04:0,19,129	0/0:7,0:3:2.96:0,3,19
chr10	93685930	.	AG	A	744.15	PASS	AB=1.000;AC=10;AF=0.227;AN=44;BaseQRankSum=-5.498;DP=292;FS=0.797;HRun=10;HaplotypeScore=45.5265;InbreedingCoeff=0.4458;MQ=54.06;MQ0=32;MQRankSum=2.308;QD=7.52;ReadPosRankSum=2.346;VQSLOD=0.9641;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:16:17.98:0,18,178	0/0:1,0:2:2.88:0,3,15	0/0:49,0:12:13.30:0,13,219	0/1:26,0:9:9.52:10,0,62	0/0:5,0:5:2.96:0,3,19	1/1:10,0:7:13.06:85,13,0	0/0:5,1:5:1.25:0,1,3	0/0:5,0:5:0:0,0,0	0/0:2,0:3:2.88:0,3,15	./.	0/0:3,0:4:5.68:0,6,28	0/0:6,1:7:2.80:0,3,7	./.	0/1:12,0:11:0.21:72,0,0	0/0:7,0:8:11.58:0,12,66	0/0:7,0:6:8.78:0,9,55	1/1:7,37:42:77.65:656,78,0	0/0:1,0:5:8.56:0,9,43	0/0:9,0:8:8.80:0,9,66	./.	./.	1/1:2,0:2:5.86:35,6,0	0/0:4,0:4:1.25:0,1,3	1/1:5,0:4:0.84:14,1,0	0/0:2,0:3:2.84:0,3,14	./.	0/0:12,0:11:14.75:0,15,94	./.
chr10	93685931	.	G	GAAAAGAAAAAAAAA	2692.79	PASS	AB=1.000;AC=26;AF=0.500;AN=52;BaseQRankSum=-1.156;DP=262;FS=6.556;HRun=0;HaplotypeScore=78.9543;InbreedingCoeff=0.3500;MQ=56.50;MQ0=32;MQRankSum=-4.588;QD=25.17;ReadPosRankSum=-2.306;VQSLOD=1.0312;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:17:22.84:0,23,659	0/0:1,0:1:3.01:0,3,37	0/0:48,0:12:33.05:0,33,490	0/1:26,0:9:17.53:18,0,382	0/1:2,0:2:12.57:143,0,13	1/1:8,1:7:17.90:350,18,0	1/1:2,3:6:3.01:210,3,0	1/1:3,0:3:3.01:41,3,0	0/0:4,0:3:2.99:0,3,23	1/1:3,0:2:6.02:306,6,0	0/1:3,0:2:12.77:13,0,31	1/1:1,4:9:6.02:419,6,0	./.	1/1:9,2:10:10.11:621,10,0	0/0:7,0:6:10.79:0,11,96	0/0:5,0:3:5.24:0,5,39	0/0:43,0:41:86.49:0,86,2644	0/0:6,0:5:8.24:0,8,80	0/0:8,0:6:7.08:0,7,89	1/1:3,0:2:3.01:64,3,0	0/0:1,0:1:2.99:0,3,23	1/1:3,0:3:5.96:61,6,0	1/1:0,2:4:3.01:210,3,0	1/1:4,0:3:0.91:38,1,0	0/0:3,0:3:3.01:0,3,36	1/1:6,0:4:8.03:85,8,0	0/1:13,0:12:59.28:281,0,59	./.
chr10	93686019	.	GAACCAA	G	467.81	PASS	AB=0.954;AC=17;AF=0.315;AN=54;BaseQRankSum=2.051;DP=321;FS=20.934;HRun=0;HaplotypeScore=62.2964;InbreedingCoeff=-0.0747;MQ=32.98;MQ0=32;MQRankSum=-0.331;QD=2.91;ReadPosRankSum=-1.994;VQSLOD=-0.2646;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:45.13:0,45,670	1/1:5,0:3:1.82:5,2,0	1/1:8,0:4:3.99:48,4,0	0/0:12,0:5:1.69:0,2,37	0/1:17,0:14:25.24:25,0,172	0/1:15,1:14:52.82:53,0,217	0/1:13,2:11:99:127,0,248	0/0:17,0:14:6.11:0,6,595	0/0:3,0:3:6.02:0,6,146	0/0:16,0:15:22.48:0,22,527	0/1:7,0:5:27.37:27,0,168	0/1:18,0:16:42.31:42,0,352	./.	0/0:10,0:9:17.54:0,18,320	0/1:8,0:7:11.42:11,0,32	0/1:7,0:7:13.71:14,0,218	0/0:13,0:11:20.41:0,20,226	1/1:9,0:4:6.02:81,6,0	0/1:18,0:12:47.95:48,0,488	0/0:14,0:12:16.58:0,17,343	0/0:7,0:2:6.02:0,6,92	0/0:8,0:8:11.96:0,12,134	0/1:5,0:4:0.49:0,0,28	0/1:6,6:6:7.37:66,0,7	0/0:8,0:3:9.02:0,9,131	0/1:15,0:14:69.14:69,0,424	0/0:16,0:11:18.04:0,18,244	0/0:9,0:5:9.03:0,9,174
chr10	93686286	.	AAAAC	A	14260.75	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-3.613;DP=523;FS=18.901;HRun=0;HaplotypeScore=110.1209;InbreedingCoeff=0.9663;MQ=66.36;MQ0=1;MQRankSum=-6.601;QD=35.74;ReadPosRankSum=6.631;VQSLOD=3.2923;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.30:0,87,2010	1/1:0,5:5:12.04:212,12,0	0/0:34,0:25:50.12:0,50,1119	0/0:26,0:25:52.21:0,52,862	1/1:2,18:20:33.11:566,33,0	1/1:1,19:20:48.16:848,48,0	1/1:3,13:16:27.09:477,27,0	1/1:6,20:26:60.18:1000,60,0	1/1:2,19:21:36.59:637,37,0	1/1:2,14:16:42.13:703,42,0	1/1:0,10:10:24.08:424,24,0	1/1:2,18:20:33.11:583,33,0	1/1:5,16:21:39.13:689,39,0	1/1:3,16:19:42.14:742,42,0	1/1:4,14:18:39.13:689,39,0	1/1:2,15:17:38.82:689,39,0	0/0:33,0:33:96.31:0,96,2227	1/1:2,14:16:10.10:457,10,0	1/1:2,17:19:51.10:808,51,0	1/1:1,8:9:21.07:371,21,0	1/1:5,14:19:24.08:424,24,0	1/1:1,8:9:18.06:318,18,0	1/1:1,8:9:15.05:265,15,0	1/1:0,15:15:30.10:530,30,0	1/1:0,12:12:21.07:371,21,0	1/1:2,17:19:51.16:848,51,0	1/1:3,31:34:75.05:1291,75,0	1/1:1,8:9:18.06:318,18,0
chr10	93686977	.	TC	T	17150.38	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=8.163;DP=546;FS=0.427;HRun=1;HaplotypeScore=60.3576;InbreedingCoeff=0.9995;MQ=85.78;MQ0=0;MQRankSum=-4.900;QD=37.86;ReadPosRankSum=1.979;VQSLOD=5.3007;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.21:0,63,1007	1/1:0,12:12:27.09:377,27,0	0/0:22,0:22:63.21:0,63,974	0/0:15,0:15:42.14:0,42,649	1/1:0,21:21:48.16:664,48,0	1/1:0,17:17:39.13:542,39,0	1/1:0,23:23:63.21:881,63,0	1/1:0,27:27:75.22:1015,75,0	1/1:0,17:17:51.17:713,51,0	1/1:0,22:22:63.21:881,63,0	1/1:0,16:16:45.15:629,45,0	1/1:0,18:18:54.18:755,54,0	1/1:0,17:17:48.16:671,48,0	1/1:0,12:12:33.11:461,33,0	1/1:0,20:20:57.19:797,57,0	1/1:0,20:20:54.18:755,54,0	0/0:34,0:34:99:0,102,1630	1/1:0,13:13:36.12:503,36,0	1/1:0,19:19:57.19:792,57,0	1/1:0,22:22:57.19:797,57,0	1/1:0,21:21:54.18:755,54,0	1/1:0,26:26:63.21:881,63,0	1/1:0,18:18:42.14:587,42,0	1/1:0,15:15:45.15:629,45,0	1/1:0,18:18:45.15:629,45,0	1/1:0,15:15:45.15:627,45,0	1/1:0,24:24:69.23:965,69,0	1/1:0,20:20:60.20:839,60,0
chr10	93687841	.	A	ACAAAATC	2217.20	PASS	AB=0.621;AC=3;AF=0.054;AN=56;BaseQRankSum=-2.026;DP=557;FS=2.843;HRun=0;HaplotypeScore=123.2419;InbreedingCoeff=0.6892;MQ=78.90;MQ0=0;MQRankSum=-7.604;QD=67.19;ReadPosRankSum=-0.128;VQSLOD=3.9634;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,11:18:9.60:1382,0,10	0/0:8,0:8:24.08:0,24,589	0/0:22,0:22:63.20:0,63,1409	0/0:13,0:13:33.96:0,34,732	0/0:29,0:29:84.27:0,84,2129	0/0:21,0:21:63.20:0,63,1540	0/0:20,0:20:50.96:0,51,1228	0/0:23,0:23:66.21:0,66,1598	0/0:15,0:15:45.14:0,45,1132	0/0:29,0:29:81.28:0,81,2101	0/0:21,0:21:60.09:0,60,1419	0/0:18,0:18:54.19:0,54,1424	0/0:21,0:21:63.20:0,63,1541	0/0:16,0:16:45.15:0,45,1090	0/0:16,0:16:39.12:0,39,974	0/0:16,0:16:45.14:0,45,1134	1/1:2,9:15:24.08:941,24,0	0/0:22,0:21:63.18:0,63,1593	0/0:17,0:17:51.17:0,51,1281	0/0:33,0:33:93.30:0,93,2366	0/0:13,0:13:36.12:0,36,884	0/0:23,0:23:57.20:0,57,1436	0/0:25,0:25:72.23:0,72,1753	0/0:15,0:15:45.12:0,45,1075	0/0:20,0:20:60.18:0,60,1442	0/0:21,0:21:63.22:0,63,1569	0/0:25,0:24:75.18:0,75,1745	0/0:22,0:22:66.23:0,66,1739
chr10	93688261	.	TA	T	8940.10	PASS	AB=0.712;AC=53;AF=0.946;AN=56;BaseQRankSum=1.075;DP=593;FS=4.098;HRun=12;HaplotypeScore=69.4863;InbreedingCoeff=-0.0337;MQ=75.03;MQ0=0;MQRankSum=1.523;QD=15.08;ReadPosRankSum=3.481;VQSLOD=5.8681;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:24:53.75:418,54,0	1/1:1,5:7:14.93:116,15,0	1/1:10,4:14:9.26:68,9,0	0/1:11,0:10:14.11:14,0,52	1/1:11,17:29:20.95:301,21,0	1/1:6,24:30:65.68:511,66,0	1/1:3,22:26:61.80:470,62,0	1/1:2,24:28:70.73:538,71,0	1/1:3,18:21:20.18:300,20,0	1/1:5,17:23:52.82:401,53,0	1/1:2,27:30:71.65:557,72,0	1/1:3,12:16:31.89:238,32,0	1/1:6,13:19:32.86:255,33,0	1/1:6,16:22:38.81:300,39,0	1/1:6,20:27:40.31:426,40,0	1/1:2,22:25:64.76:493,65,0	1/1:5,21:27:46.79:412,47,0	1/1:5,15:20:17.40:318,17,0	0/1:3,7:13:0.42:150,0,0	1/1:5,22:28:58.67:440,59,0	1/1:9,10:20:4.44:207,4,0	1/1:7,9:18:30.92:221,31,0	1/1:3,14:17:32.79:255,33,0	1/1:2,14:16:38.85:302,39,0	1/1:4,18:23:5.94:303,6,0	1/1:7,22:30:64.73:491,65,0	1/1:2,18:20:17.28:318,17,0	0/1:2,6:8:9.51:118,0,10
chr10	93689491	.	GT	G	1484.32	PASS	AB=0.638;AC=22;AF=0.393;AN=56;BaseQRankSum=-3.920;DP=457;FS=14.558;HRun=15;HaplotypeScore=64.7240;InbreedingCoeff=0.5803;MQ=75.81;MQ0=2;MQRankSum=1.897;QD=6.32;ReadPosRankSum=0.737;VQSLOD=1.0019;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:22:20.72:59,21,0	1/1:3,6:11:18.80:108,19,0	0/0:22,0:14:17.25:0,17,115	0/0:11,0:6:8.64:0,9,46	0/1:7,12:20:14.40:171,0,14	0/0:2,0:9:8.52:0,9,42	0/0:5,0:11:20.29:0,20,120	1/1:13,9:25:31.23:185,31,0	1/1:1,10:11:26.10:172,26,0	0/1:10,9:21:20.12:113,0,20	1/1:7,10:18:4.27:150,4,0	0/0:5,0:14:17.51:0,18,118	0/0:5,0:16:17.19:0,17,94	0/0:2,0:12:8.68:0,9,55	1/1:12,6:19:2.13:132,2,0	0/1:6,9:15:22.87:108,0,23	1/1:5,1:27:30.27:97,30,0	0/1:7,7:14:29.81:84,0,30	0/0:29,0:29:64.53:0,65,286	0/0:15,0:15:39.53:0,40,192	0/0:10,0:10:11.32:0,11,54	0/0:4,0:6:5.80:0,6,33	0/0:5,0:9:13.24:0,13,85	0/0:3,0:7:5.68:0,6,28	1/1:3,17:22:26.15:222,26,0	0/0:25,1:26:35.49:0,35,203	0/0:25,0:25:59.77:0,60,306	1/1:5,4:10:13.79:83,14,0
chr10	93690783	.	TAA	T	3493.66	PASS	AB=0.824;AC=39;AF=0.696;AN=56;BaseQRankSum=-3.094;DP=509;FS=11.113;HRun=15;HaplotypeScore=88.6606;InbreedingCoeff=0.0971;MQ=59.90;MQ0=17;MQRankSum=-1.087;QD=7.99;ReadPosRankSum=3.693;VQSLOD=0.3909;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:29:43.05:181,43,0	1/1:0,1:1:3:26,3,0	0/1:54,0:14:5.13:5,0,88	0/0:46,0:18:12.71:0,13,102	1/1:3,12:15:23.78:254,24,0	0/1:20,0:20:12.48:64,0,12	0/1:9,0:9:13.64:14,0,18	0/1:9,16:26:29.55:342,0,30	0/1:4,11:14:5.44:137,0,5	1/1:9,15:25:29.60:302,30,0	1/1:4,20:25:50.15:418,50,0	0/1:10,0:10:1.62:2,0,60	1/1:8,0:8:12.41:94,12,0	0/1:14,0:14:20.98:21,0,33	1/1:5,4:9:11.45:89,11,0	1/1:1,18:20:41.88:414,42,0	1/1:4,0:17:38.69:151,39,0	1/1:3,18:22:23.65:298,24,0	0/1:6,2:23:9.88:10,0,165	0/1:16,0:26:37.12:37,0,172	0/0:3,0:8:8.07:0,8,28	1/1:5,0:5:8.03:58,8,0	0/1:11,0:11:21.35:80,0,21	1/1:3,0:3:3.22:43,3,0	1/1:6,15:20:37.96:347,38,0	0/0:7,0:18:33.45:0,33,159	0/1:5,2:18:26.37:26,0,75	1/1:5,3:6:8.96:79,9,0
chr10	93690799	.	CA	C	667.67	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.267;DP=506;FS=13.583;HRun=15;HaplotypeScore=98.2722;InbreedingCoeff=0.7003;MQ=57.16;MQ0=14;MQRankSum=-6.745;QD=15.17;ReadPosRankSum=1.363;VQSLOD=3.1078;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,21:26:50.87:432,51,0	0/0:3,0:3:6.02:0,6,68	0/0:54,0:14:10.33:0,10,136	0/0:33,0:9:7.08:0,7,47	0/0:18,0:17:39.09:0,39,418	0/0:22,0:22:43.14:0,43,216	0/0:7,0:7:1.93:0,2,42	0/0:30,0:30:53.55:0,54,523	0/0:11,0:10:17.95:0,18,161	0/0:25,0:25:57.14:0,57,622	0/0:29,0:28:63.39:0,63,616	0/0:10,0:10:14.68:0,15,99	0/0:8,0:8:5.97:0,6,24	0/0:13,0:13:27.59:0,28,173	0/0:9,0:9:21.03:0,21,213	0/0:20,0:20:53.70:0,54,510	1/1:5,13:18:41.96:356,42,0	0/0:21,0:20:44.77:0,45,453	0/0:26,0:26:47.54:0,48,524	0/0:25,0:25:48.71:0,49,439	0/0:8,0:8:15.45:0,15,136	0/0:4,0:4:5.81:0,6,20	0/0:8,0:8:13.70:0,14,78	0/0:6,0:6:10.36:0,10,63	0/0:22,0:21:54.11:0,54,577	0/0:20,0:20:51.06:0,51,532	0/0:22,0:22:50.05:0,50,485	0/0:8,0:6:15.04:0,15,161
chr10	93690935	.	CA	C	2330.43	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.150;DP=550;FS=8.525;HRun=2;HaplotypeScore=94.9808;InbreedingCoeff=0.9343;MQ=80.64;MQ0=0;MQRankSum=-3.538;QD=30.27;ReadPosRankSum=4.989;VQSLOD=2.6148;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,47:47:99:1401,108,0	0/0:6,0:6:18.06:0,18,270	0/0:15,0:15:39.02:0,39,562	0/0:25,0:24:69.17:0,69,980	0/0:24,0:24:66.09:0,66,900	0/0:28,0:28:78.15:0,78,1094	0/0:34,0:34:99:0,99,1437	0/0:25,0:24:72.23:0,72,1043	0/0:18,0:18:54.07:0,54,718	0/0:20,0:20:56.99:0,57,854	0/0:14,0:14:39.12:0,39,565	0/0:14,0:14:27.02:0,27,355	0/0:10,0:10:27.09:0,27,404	0/0:14,0:14:36.09:0,36,515	0/0:22,0:22:66.10:0,66,915	0/0:20,0:20:57.03:0,57,751	1/1:0,30:30:81.26:1051,81,0	0/0:22,0:22:63.21:0,63,937	0/0:22,0:22:66.22:0,66,973	0/0:25,0:25:66.14:0,66,938	0/0:22,0:22:63.17:0,63,918	0/0:6,0:6:15.04:0,15,197	0/0:12,0:12:33.11:0,33,494	0/0:19,0:19:54.15:0,54,784	0/0:9,0:9:21.07:0,21,315	0/0:22,0:22:57.19:0,57,855	0/0:23,0:23:60.14:0,60,848	0/0:2,0:2:6.02:0,6,90
chr10	93691017	.	AG	A	8012.74	PASS	AB=0.949;AC=52;AF=0.929;AN=56;BaseQRankSum=2.932;DP=542;FS=0.000;HRun=1;HaplotypeScore=271.9978;InbreedingCoeff=-0.0747;MQ=48.16;MQ0=0;MQRankSum=-1.531;QD=14.78;ReadPosRankSum=6.193;VQSLOD=4.4304;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,3:36:61.47:489,61,0	1/1:8,0:8:8.03:98,8,0	0/1:12,0:8:30.41:30,0,57	0/1:17,1:17:81.06:82,0,81	1/1:20,3:23:36.21:225,36,0	1/1:23,2:25:61.34:475,61,0	1/1:17,5:22:49.15:462,49,0	0/1:32,1:33:32.23:391,0,32	1/1:13,2:15:27.53:242,28,0	0/1:25,4:29:0.57:439,0,1	1/1:21,2:23:25.19:253,25,0	1/1:32,0:32:79.56:607,80,0	1/1:18,2:20:47.08:339,47,0	1/1:19,0:19:29.44:269,29,0	1/1:25,2:26:47.74:411,48,0	1/1:18,1:19:29.29:291,29,0	1/1:13,2:15:28.56:203,29,0	1/1:10,2:12:26.95:211,27,0	1/1:12,3:15:35.07:354,35,0	1/1:16,3:19:46.92:261,47,0	1/1:15,2:17:25.61:202,26,0	1/1:2,0:2:5.97:45,6,0	1/1:7,0:7:20.89:158,21,0	1/1:15,3:18:32.55:207,33,0	1/1:13,1:14:16.06:193,16,0	1/1:20,3:23:51.50:450,52,0	1/1:28,0:28:64.40:439,64,0	1/1:9,2:11:29.21:184,29,0
chr10	93691613	.	TTTACTGTTTTTTAAG	T	21725.94	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.837;DP=601;FS=6.349;HRun=0;HaplotypeScore=284.3395;InbreedingCoeff=0.9970;MQ=84.08;MQ0=0;MQRankSum=-17.401;QD=106.50;ReadPosRankSum=4.400;VQSLOD=3.9300;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,12:17:39.12:1382,39,0	1/1:1,7:8:21.07:957,21,0	0/0:23,0:23:63.13:0,63,3357	0/0:21,0:21:57.19:0,57,3024	1/1:3,34:37:99:4605,105,0	0/0:36,0:36:99:0,108,7896	0/0:18,0:18:54.19:0,54,3913	0/0:26,0:26:75.26:0,75,5104	1/1:6,15:21:48.16:2040,48,0	1/1:3,19:22:57.16:2468,57,0	1/1:4,18:22:63.22:2567,63,0	0/0:23,0:23:69.24:0,69,5082	0/0:24,0:24:69.24:0,69,5039	0/0:16,0:16:48.16:0,48,3429	1/1:5,14:19:48.15:1884,48,0	1/1:3,12:15:39.13:1726,39,0	1/1:5,14:19:42.12:1800,42,0	1/1:4,4:8:15.01:567,15,0	0/0:32,0:32:90.31:0,90,6113	0/0:23,0:23:69.24:0,69,5069	0/0:20,0:20:60.21:0,60,3866	0/0:32,0:32:96.33:0,96,6859	0/0:21,0:21:63.22:0,63,4590	0/0:11,0:11:33.11:0,33,2301	1/1:4,12:16:42.14:1729,42,0	0/0:25,0:25:75.26:0,75,5119	0/0:34,0:32:99:0,99,6176	0/0:12,0:12:30.10:0,30,2125
chr10	93691664	.	TA	T	12790.79	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=11.029;DP=632;FS=12.386;HRun=7;HaplotypeScore=140.1234;InbreedingCoeff=0.9833;MQ=75.20;MQ0=0;MQRankSum=-3.236;QD=26.59;ReadPosRankSum=3.093;VQSLOD=3.2612;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:39.08:398,39,0	1/1:2,5:7:15.03:153,15,0	0/0:16,0:16:26.32:0,26,356	0/0:14,0:14:8.22:0,8,280	1/1:4,33:37:81.17:826,81,0	1/1:2,36:38:99:1102,108,0	1/1:2,24:26:63.14:643,63,0	1/1:4,24:28:72.16:735,72,0	1/1:4,17:21:51.11:520,51,0	1/1:6,20:26:60.13:612,60,0	1/1:0,30:30:87.20:887,87,0	1/1:2,22:24:63.14:643,63,0	1/1:1,28:29:84.19:857,84,0	1/1:0,10:10:30.07:306,30,0	1/1:0,28:28:81.18:826,81,0	1/1:2,17:19:48.10:489,48,0	1/1:1,23:24:69.16:704,69,0	1/1:1,8:9:24.05:245,24,0	0/0:30,0:29:87.28:0,87,1094	0/0:33,0:33:96.30:0,96,1193	0/0:11,0:11:24.08:0,24,302	1/1:1,25:26:75.17:765,75,0	1/1:0,28:28:71.77:734,72,0	1/1:3,9:12:27.05:275,27,0	1/1:4,16:20:45.09:459,45,0	0/0:16,0:16:39.12:0,39,491	0/0:31,0:30:90.26:0,90,1116	1/1:0,22:22:60.14:612,60,0
chr10	93692367	.	T	TAG	2293.30	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.808;DP=604;FS=8.937;HRun=0;HaplotypeScore=74.1782;InbreedingCoeff=0.9986;MQ=84.78;MQ0=1;MQRankSum=0.250;QD=46.80;ReadPosRankSum=-3.672;VQSLOD=3.3451;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:81.74:0,82,1114	0/0:9,0:9:24.08:0,24,330	0/0:19,0:19:48.16:0,48,651	0/0:26,0:26:40.79:0,41,739	0/0:23,0:23:60.19:0,60,808	0/0:24,0:24:60.20:0,60,822	0/0:15,0:15:45.13:0,45,601	1/1:2,32:35:96.32:1670,96,0	0/0:15,0:15:45.14:0,45,601	0/0:23,0:23:66.21:0,66,893	0/0:20,0:20:51.17:0,51,701	0/0:21,0:21:57.19:0,57,783	0/0:26,0:26:72.23:0,72,973	0/0:28,0:28:63.21:0,63,865	0/0:27,0:27:69.23:0,69,948	0/0:16,0:16:42.14:0,42,577	0/0:27,0:27:63.15:0,63,827	0/0:16,0:15:36.12:0,36,495	0/0:21,0:21:51.14:0,51,667	0/0:27,0:27:78.26:0,78,1071	0/0:30,0:30:87.29:0,87,1195	0/0:13,0:13:36.12:0,36,495	0/0:21,0:21:60.20:0,60,825	0/0:12,0:12:33.09:0,33,435	0/0:15,0:15:42.11:0,42,556	0/0:20,0:20:57.19:0,57,783	0/0:28,0:28:75.24:0,75,1013	1/1:0,14:14:42.14:745,42,0
chr10	93692696	.	TA	T	2387.27	PASS	AB=0.971;AC=33;AF=0.589;AN=56;BaseQRankSum=10.772;DP=466;FS=0.380;HRun=1;HaplotypeScore=99.0457;InbreedingCoeff=0.7382;MQ=64.69;MQ0=0;MQRankSum=0.210;QD=7.90;ReadPosRankSum=2.013;VQSLOD=0.9869;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,1:25:42.20:158,42,0	0/0:7,0:7:9.83:0,10,89	0/0:13,0:13:30.05:0,30,396	0/1:8,0:6:18.91:19,0,92	0/1:18,1:19:43.46:43,0,173	1/1:15,2:17:31.44:125,31,0	1/1:13,0:13:20.13:70,20,0	0/1:25,1:26:8.33:8,0,219	0/0:20,1:21:31.35:0,31,316	0/0:16,0:16:34.04:0,34,200	0/0:25,2:27:24.50:0,24,334	1/1:19,0:19:16.52:93,17,0	1/1:22,0:22:31.63:119,32,0	1/1:15,0:15:20.45:68,20,0	0/0:15,1:16:24.25:0,24,250	0/0:13,0:13:32.57:0,33,208	1/1:19,0:19:28.53:92,29,0	0/0:29,0:29:67.61:0,68,462	1/1:5,11:16:37.65:304,38,0	1/1:7,20:27:65.67:514,66,0	1/1:2,6:8:17.41:133,17,0	1/1:7,0:7:14.98:67,15,0	1/1:8,0:8:14.70:48,15,0	1/1:14,1:15:24.89:92,25,0	0/0:16,0:16:17.09:0,17,210	1/1:3,11:14:1.94:230,2,0	1/1:5,19:24:26.27:419,26,0	0/0:6,0:6:11.53:0,12,77
chr10	93692698	.	GAA	G	3551.91	PASS	AB=0.933;AC=22;AF=0.393;AN=56;BaseQRankSum=2.657;DP=469;FS=6.429;HRun=12;HaplotypeScore=105.3654;InbreedingCoeff=0.8388;MQ=66.45;MQ0=0;MQRankSum=1.010;QD=19.20;ReadPosRankSum=3.265;VQSLOD=2.9024;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:25:47.60:540,48,0	0/0:7,0:7:21.04:0,21,274	0/1:12,1:12:14.28:14,0,149	0/0:10,0:8:2.81:0,3,122	0/0:19,0:20:52.67:0,53,620	1/1:5,12:17:23.19:348,23,0	1/1:4,9:13:27.04:275,27,0	0/0:23,0:24:62.65:0,63,840	0/0:22,0:22:65.67:0,66,888	0/0:16,0:16:36.12:0,36,537	0/0:29,0:29:77.20:0,77,1015	1/1:2,16:18:45.07:458,45,0	1/1:4,17:21:42.07:426,42,0	1/1:3,12:15:30.04:305,30,0	0/0:16,0:16:44.64:0,45,635	0/0:13,0:13:36.10:0,36,516	1/1:2,16:18:45.09:458,45,0	0/0:31,0:31:78.22:0,78,1098	0/1:14,1:15:5:5,0,79	0/0:27,0:27:61.25:0,61,250	0/0:9,0:9:17.83:0,18,66	1/1:0,7:7:18.04:183,18,0	1/1:0,8:8:21.05:214,21,0	1/1:2,12:15:26.17:326,26,0	0/0:15,0:15:42.13:0,42,581	0/0:14,0:14:33.47:0,33,187	0/0:25,0:25:56.44:0,56,289	0/0:6,0:6:15.04:0,15,205
chr10	93693704	.	ATG	A	5031.54	PASS	AC=38;AF=0.826;AN=46;BaseQRankSum=-0.980;DP=374;FS=0.833;HRun=0;HaplotypeScore=48.7067;InbreedingCoeff=0.6714;MQ=64.30;MQ0=15;MQRankSum=-2.245;QD=21.88;ReadPosRankSum=3.592;VQSLOD=5.0513;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:14:24.08:335,24,0	1/1:4,0:3:6.02:84,6,0	0/0:28,0:15:39.10:0,39,592	0/0:30,0:19:54.63:0,55,841	1/1:3,5:7:4.98:24,5,0	1/1:13,0:12:10.16:306,10,0	1/1:15,0:14:27.09:378,27,0	1/1:16,3:19:51.17:700,51,0	./.	1/1:0,12:12:30.98:392,31,0	0/0:1,8:9:0:0,0,0	./.	1/1:5,0:5:15.05:204,15,0	./.	0/0:1,9:10:0:0,0,0	1/1:9,0:9:21.07:295,21,0	1/1:17,0:17:9.02:92,9,0	1/1:18,0:16:38.53:505,39,0	1/1:1,7:8:21.06:273,21,0	./.	1/1:0,24:24:3.01:42,3,0	1/1:10,0:10:21.07:294,21,0	1/1:11,1:12:21.05:275,21,0	./.	1/1:9,0:9:27.09:380,27,0	1/1:2,6:7:10.06:217,10,0	1/1:14,1:15:14.66:160,15,0	1/1:2,6:8:6.02:76,6,0
chr10	93693707	.	TGTACAC	T	4463.07	PASS	AB=1.000;AC=29;AF=0.558;AN=52;BaseQRankSum=-4.607;DP=385;FS=8.859;HRun=0;HaplotypeScore=68.4203;InbreedingCoeff=0.1244;MQ=62.50;MQ0=15;MQRankSum=-0.994;QD=18.91;ReadPosRankSum=4.861;VQSLOD=2.4922;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:13:24.08:335,24,0	0/1:4,0:3:58.12:75,0,58	0/0:26,0:13:39.10:0,39,592	0/0:30,0:19:54.63:0,55,839	0/1:8,0:7:11.96:12,0,41	0/1:15,0:14:99:153,0,128	1/1:16,0:15:27.09:378,27,0	1/1:20,0:20:51.17:700,51,0	./.	0/1:14,0:14:96.17:302,0,96	0/0:8,0:8:0:0,0,0	0/0:16,0:16:6.01:0,6,61	0/1:6,0:6:27.95:144,0,28	0/0:10,0:10:3.01:0,3,30	0/0:11,0:11:3.01:0,3,50	1/1:7,0:7:21.07:295,21,0	1/1:3,13:16:8.91:114,9,0	0/1:20,0:18:99:313,0,103	1/1:8,0:8:21.05:273,21,0	./.	1/1:25,0:25:0.95:39,1,0	0/1:10,0:10:29.78:229,0,30	0/1:12,0:12:26.44:228,0,26	0/0:26,0:25:6.01:0,6,64	0/1:10,0:10:7.14:310,0,7	1/1:8,0:7:10.06:217,10,0	1/1:2,10:14:15:271,15,0	1/1:8,0:8:6.02:76,6,0
chr10	93694710	.	G	GA	7705.14	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-15.511;DP=574;FS=0.000;HRun=6;HaplotypeScore=50.6186;InbreedingCoeff=0.9947;MQ=77.27;MQ0=0;MQRankSum=-2.113;QD=33.21;ReadPosRankSum=2.043;VQSLOD=4.8021;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:33.08:0,33,337	1/1:0,13:13:36.12:453,36,0	0/0:12,0:12:24.01:0,24,234	0/0:12,0:12:29.42:0,29,278	1/1:3,26:29:78.10:913,78,0	0/0:24,0:24:72.16:0,72,735	0/0:14,0:14:36.08:0,36,367	1/1:3,23:26:69.22:868,69,0	1/1:1,14:15:36.12:452,36,0	1/1:1,35:37:99:1301,105,0	1/1:1,25:26:69.18:850,69,0	0/0:10,0:10:27.06:0,27,275	0/0:21,0:21:51.10:0,51,514	0/0:24,0:24:66.14:0,66,673	1/1:0,14:14:42.13:528,42,0	1/1:1,22:23:60.19:755,60,0	0/0:23,0:23:66.12:0,66,664	1/1:2,4:6:12.04:151,12,0	0/0:22,0:22:45.10:0,45,459	0/0:34,0:34:90.19:0,90,912	0/0:12,0:12:36.05:0,36,358	0/0:14,0:14:39.09:0,39,398	0/0:29,0:29:78.18:0,78,796	0/0:23,0:23:66.14:0,66,667	1/1:1,18:19:48.15:604,48,0	0/0:21,1:22:25.40:0,25,575	0/0:35,0:34:93.20:0,93,943	1/1:2,22:24:66.21:830,66,0
chr10	93695163	.	CTT	C	473.60	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.877;DP=613;FS=8.012;HRun=2;HaplotypeScore=71.6033;InbreedingCoeff=0.9981;MQ=75.46;MQ0=0;MQRankSum=-0.662;QD=33.83;ReadPosRankSum=0.737;VQSLOD=3.0812;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:39.13:568,39,0	0/0:13,0:13:39.13:0,39,777	0/0:12,0:12:29.11:0,29,534	0/0:10,0:10:27.09:0,27,521	0/0:30,0:30:90.30:0,90,1760	0/0:33,0:33:99:0,99,1872	0/0:17,0:17:51.18:0,51,1027	0/0:37,0:37:99:0,111,2217	0/0:22,0:22:66.23:0,66,1315	0/0:30,0:30:90.31:0,90,1829	0/0:22,0:22:66.23:0,66,1341	0/0:19,0:19:57.20:0,57,1159	0/0:26,0:26:78.25:0,78,1549	0/0:24,0:24:72.25:0,72,1463	0/0:22,0:22:66.23:0,66,1341	0/0:15,0:15:45.15:0,45,915	0/0:18,0:18:54.19:0,54,1082	0/0:13,0:13:39.10:0,39,752	0/0:24,0:24:72.25:0,72,1457	0/0:28,0:28:84.29:0,84,1707	0/0:18,0:18:54.19:0,54,1098	0/0:30,0:30:90.31:0,90,1828	0/0:22,0:22:66.23:0,66,1328	0/0:19,0:19:57.20:0,57,1157	0/0:27,0:27:81.27:0,81,1603	0/0:27,0:27:81.28:0,81,1640	0/0:28,0:27:84.27:0,84,1661	0/0:13,0:13:39.13:0,39,793
chr10	93695876	.	G	GCACACACACA	3074.60	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=-5.451;DP=449;FS=9.512;HRun=0;HaplotypeScore=193.5718;InbreedingCoeff=0.3955;MQ=71.25;MQ0=5;MQRankSum=-0.884;QD=10.05;ReadPosRankSum=-5.155;VQSLOD=0.1821;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:10.52:124,11,0	0/1:5,0:5:8.20:105,0,8	0/0:28,0:20:47.02:0,47,1047	0/0:28,0:22:57.61:0,58,1437	0/1:11,0:11:14.28:14,0,100	1/1:18,0:17:5.45:98,5,0	1/1:22,0:20:7.52:121,8,0	1/1:19,0:19:30.78:439,31,0	0/1:18,0:18:47.97:48,0,131	0/1:9,0:9:23.19:203,0,23	0/0:13,0:13:3.44:0,3,21	1/1:13,0:14:20.86:362,21,0	1/1:7,0:7:12.02:160,12,0	0/0:5,5:20:0.24:0,0,0	0/0:18,0:17:20.43:0,20,151	0/1:15,0:14:8.52:9,0,94	0/1:23,0:23:25.21:165,0,25	0/0:15,0:15:23.87:0,24,183	1/1:6,0:6:10.21:192,10,0	1/1:11,0:11:3.47:51,3,0	1/1:23,0:23:9.77:164,10,0	1/1:12,0:12:12:106,12,0	1/1:17,0:17:12.47:127,12,0	1/1:24,0:24:13.70:226,14,0	0/0:15,0:15:11.57:0,12,70	1/1:14,0:13:16.35:208,16,0	1/1:6,1:8:12.48:338,12,0	0/0:6,0:6:2.70:0,3,22
chr10	93695878	.	ACG	A	4019.79	PASS	AB=0.963;AC=46;AF=0.821;AN=56;BaseQRankSum=1.647;DP=446;FS=8.877;HRun=0;HaplotypeScore=133.6673;InbreedingCoeff=0.2292;MQ=67.32;MQ0=5;MQRankSum=-1.263;QD=10.20;ReadPosRankSum=2.302;VQSLOD=3.2029;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,1:30:15.45:126,15,0	1/1:4,1:5:5.21:66,5,0	0/0:26,0:18:42.97:0,43,677	0/0:26,0:20:58.22:0,58,902	1/1:6,5:12:20.86:208,21,0	1/1:19,0:18:9.83:79,10,0	1/1:21,1:20:6.18:152,6,0	1/1:0,0:19:44.30:345,44,0	1/1:12,5:18:23.28:350,23,0	1/1:7,4:11:16.07:232,16,0	1/1:0,11:11:6.02:77,6,0	0/1:14,0:14:14.36:71,0,14	1/1:7,0:7:6.43:45,6,0	0/1:18,0:18:0.29:0,0,0	1/1:1,16:16:21.01:269,21,0	1/1:2,12:14:17.08:192,17,0	1/1:22,3:25:38.56:395,39,0	1/1:2,15:17:24.08:324,24,0	0/1:4,1:5:42.04:44,0,42	1/1:11,0:11:1.31:108,1,0	1/1:21,0:21:13.55:162,14,0	1/1:13,0:13:8.92:97,9,0	0/1:16,1:17:27.88:37,0,28	1/1:23,0:23:12.34:186,12,0	1/1:10,5:15:11.09:234,11,0	0/1:15,0:14:49.71:116,0,50	0/1:8,0:8:17.47:46,0,17	1/1:0,6:6:5.98:60,6,0
chr10	93695882	.	ACG	A	4271.32	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=1.020;DP=473;FS=3.754;HRun=0;HaplotypeScore=140.4810;InbreedingCoeff=0.2481;MQ=62.73;MQ0=7;MQRankSum=-1.596;QD=10.10;ReadPosRankSum=0.114;VQSLOD=4.7403;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:9.45:74,9,0	1/1:6,0:6:6.01:66,6,0	0/0:23,0:15:27.60:0,28,545	0/0:27,0:20:49.63:0,50,701	1/1:16,1:17:23.81:231,24,0	1/1:21,0:20:12.41:101,12,0	1/1:24,0:22:13.05:201,13,0	1/1:24,0:23:44.76:343,45,0	1/1:22,1:23:24.50:341,24,0	1/1:12,0:12:23.59:264,24,0	1/1:9,2:11:6.02:74,6,0	0/1:15,0:15:6.80:92,0,7	1/1:6,0:6:3.48:34,3,0	0/1:18,0:18:0.29:0,0,0	1/1:14,3:16:21.01:268,21,0	1/1:14,2:15:18.52:227,19,0	1/1:24,1:27:48.40:464,48,0	1/1:17,0:17:24.08:331,24,0	0/1:7,0:7:38.14:61,0,38	1/1:11,0:11:1.31:108,1,0	1/1:23,0:23:20.96:173,21,0	1/1:12,0:12:11.59:85,12,0	0/1:18,0:18:22.38:56,0,22	1/1:23,0:23:12.09:181,12,0	1/1:17,1:18:16.22:263,16,0	0/1:15,0:14:46.10:132,0,46	0/1:8,0:8:18.08:40,0,18	1/1:6,0:6:5.99:62,6,0
chr10	93696580	.	GT	G	19223.42	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-3.229;DP=587;FS=20.528;HRun=2;HaplotypeScore=125.2021;InbreedingCoeff=0.6688;MQ=76.02;MQ0=0;MQRankSum=-7.411;QD=33.73;ReadPosRankSum=4.764;VQSLOD=2.9775;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:87.28:1127,87,0	1/1:0,7:7:21.07:273,21,0	0/1:23,0:18:12.65:13,0,342	0/0:16,0:14:33.13:0,33,417	1/1:0,27:27:69.07:852,69,0	1/1:6,18:24:69.20:855,69,0	1/1:3,16:19:45.14:552,45,0	1/1:0,38:38:99:1409,111,0	1/1:1,18:19:45.15:584,45,0	1/1:1,26:27:78.24:1000,78,0	1/1:0,20:20:60.15:760,60,0	1/1:6,15:21:60.15:718,60,0	1/1:4,18:22:66.19:822,66,0	1/1:4,17:21:54.16:661,54,0	1/1:1,15:16:42.14:545,42,0	1/1:1,28:29:84.27:1091,84,0	1/1:1,14:15:42.14:536,42,0	1/1:0,15:15:42.14:545,42,0	1/1:0,19:19:57.16:724,57,0	1/1:0,26:26:78.19:991,78,0	1/1:0,16:16:39.13:506,39,0	1/1:4,16:20:57.15:671,57,0	1/1:2,17:19:57.18:717,57,0	1/1:5,9:14:32.57:420,33,0	1/1:0,14:14:42.14:545,42,0	1/1:1,23:24:69.19:866,69,0	1/1:1,30:31:75.24:973,75,0	1/1:0,13:13:36.12:467,36,0
chr10	93696590	.	T	TA	3575.71	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=7.564;DP=583;FS=0.366;HRun=0;HaplotypeScore=177.7590;InbreedingCoeff=0.9836;MQ=73.32;MQ0=0;MQRankSum=-12.200;QD=21.54;ReadPosRankSum=1.428;VQSLOD=3.7160;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.25:0,90,1195	0/0:8,0:8:20.09:0,20,104	0/0:28,0:21:28.64:0,29,285	0/0:16,0:12:25.63:0,26,208	0/0:24,0:24:32.91:0,33,275	1/1:10,14:24:61.44:634,61,0	1/1:3,14:17:45.97:444,46,0	0/0:40,0:40:96.94:0,97,490	0/0:17,0:17:39.39:0,39,208	0/0:25,0:25:40.83:0,41,283	0/0:21,0:21:56.55:0,57,298	1/1:5,14:19:44.90:451,45,0	1/1:10,10:20:8.64:323,9,0	1/1:2,17:19:44.32:446,44,0	0/0:14,0:14:37.55:0,38,208	0/0:32,0:32:48.58:0,49,371	1/1:9,5:14:12.11:122,12,0	0/0:19,0:19:48.28:0,48,270	0/0:20,0:20:60.18:0,60,790	0/0:25,0:25:66.22:0,66,911	0/0:14,0:14:36.10:0,36,469	1/1:3,14:17:47.77:473,48,0	1/1:8,13:21:30.79:408,31,0	1/1:10,5:15:27.01:275,27,0	0/0:15,0:15:37.44:0,37,189	0/0:26,0:26:78.21:0,78,1005	0/0:32,0:32:86.31:0,86,1148	0/0:9,0:9:26.20:0,26,147
chr10	93696591	.	T	TAA	2451.83	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=6.775;DP=583;FS=0.000;HRun=9;HaplotypeScore=189.6172;InbreedingCoeff=0.9692;MQ=73.32;MQ0=0;MQRankSum=-8.960;QD=14.59;ReadPosRankSum=-3.119;VQSLOD=-0.4981;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:78.18:0,78,829	0/0:8,0:8:16.84:0,17,112	0/0:29,0:22:42.60:0,43,329	0/0:15,0:11:8.46:0,8,76	0/0:23,0:23:15.60:0,16,266	1/1:24,0:24:56.85:469,57,0	1/1:17,0:17:45.39:278,45,0	0/0:40,0:40:55.94:0,56,509	0/0:17,0:17:29.44:0,29,213	0/0:24,0:24:55.45:0,55,368	0/0:21,0:21:27.57:0,28,328	1/1:19,0:19:46.18:324,46,0	1/1:20,0:20:10.28:241,10,0	1/1:18,0:19:44.36:324,44,0	0/0:14,0:14:13.27:0,13,221	0/0:32,0:32:38:0,38,418	1/1:11,5:16:11.81:99,12,0	0/0:19,0:19:32.82:0,33,269	0/0:21,0:21:51.09:0,51,534	0/0:24,0:24:60.12:0,60,630	0/0:14,0:14:24.05:0,24,255	1/1:17,0:17:46.48:317,46,0	1/1:20,1:21:29.98:312,30,0	1/1:13,2:15:30.77:299,31,0	0/0:15,0:15:32.73:0,33,213	0/0:27,0:27:74.66:0,75,773	0/0:32,0:32:75.08:0,75,756	0/0:9,0:9:26.74:0,27,186
chr10	93696624	.	TG	T	445.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.606;DP=557;FS=3.227;HRun=2;HaplotypeScore=117.6836;InbreedingCoeff=0.9927;MQ=80.02;MQ0=0;MQRankSum=-1.418;QD=17.13;ReadPosRankSum=-0.520;VQSLOD=3.6227;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:26:48.07:540,48,0	0/0:12,0:12:24.08:0,24,359	0/0:21,0:21:48.17:0,48,795	0/0:19,0:19:47.75:0,48,675	0/0:21,0:21:60.19:0,60,867	0/0:20,0:20:57.17:0,57,814	0/0:19,0:19:51.10:0,51,728	0/0:38,0:38:99:0,105,1538	0/0:16,0:16:42.13:0,42,608	0/0:26,0:26:75.25:0,75,1120	0/0:22,0:22:60.20:0,60,894	0/0:15,0:15:45.15:0,45,672	0/0:16,0:16:48.16:0,48,712	0/0:19,0:19:48.12:0,48,693	0/0:21,0:21:57.14:0,57,790	0/0:34,0:34:99:0,99,1463	0/0:22,0:22:54.18:0,54,801	0/0:23,0:23:69.20:0,69,1002	0/0:17,0:17:51.13:0,51,722	0/0:20,0:20:54.16:0,54,767	0/0:17,0:17:48.16:0,48,701	0/0:13,0:13:36.04:0,36,501	0/0:16,0:16:47.95:0,48,656	0/0:14,0:14:39.13:0,39,575	0/0:10,0:10:27.06:0,27,364	0/0:23,0:23:69.23:0,69,1016	0/0:29,0:29:81.27:0,81,1208	0/0:7,0:7:21.07:0,21,315
chr10	93697109	.	A	AT	729.22	PASS	AB=0.833;AC=14;AF=0.250;AN=56;BaseQRankSum=-0.134;DP=241;FS=2.964;HRun=14;HaplotypeScore=48.5337;InbreedingCoeff=0.0655;MQ=67.07;MQ0=2;MQRankSum=0.182;QD=6.69;ReadPosRankSum=-0.322;VQSLOD=1.9384;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,21:30:2.99:378,3,0	0/1:3,1:6:16.37:16,0,20	0/0:8,0:8:6.10:0,6,35	0/1:10,0:7:8.64:9,0,13	0/0:16,0:15:20.57:0,21,134	0/1:3,1:5:15.41:15,0,33	0/1:2,3:4:7.27:67,0,7	0/0:7,0:13:20.03:0,20,75	0/0:5,0:6:4.85:0,5,25	0/0:6,0:6:5.88:0,6,37	0/0:11,0:11:5.78:0,6,38	0/0:1,0:2:2.04:0,2,6	0/1:4,0:5:0.79:19,0,1	0/0:4,0:4:2.83:0,3,19	0/0:4,0:5:10.87:0,11,62	0/1:4,1:7:16.49:16,0,21	0/1:7,8:16:41.99:136,0,42	0/0:4,0:3:2.94:0,3,19	0/0:10,0:10:11.56:0,12,69	0/0:7,0:8:16.74:0,17,100	0/0:6,0:5:8.84:0,9,58	0/1:1,0:1:0:0,0,0	1/1:0,5:5:15:132,15,0	0/1:2,3:5:7.27:67,0,7	0/1:10,1:14:20.42:20,0,83	0/0:10,0:10:14.67:0,15,96	0/0:10,0:10:20.59:0,21,133	0/0:8,0:10:6.86:0,7,25
chr10	93698171	.	A	ACTAAGC	45001.09	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.730;DP=592;FS=7.514;HRun=0;HaplotypeScore=123.1187;InbreedingCoeff=0.9787;MQ=60.82;MQ0=0;MQRankSum=-8.866;QD=81.08;ReadPosRankSum=4.354;VQSLOD=6.2896;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,24:31:72.20:2439,72,0	1/1:1,5:7:21.07:743,21,0	0/0:22,0:22:53.98:0,54,1149	0/0:14,0:13:30.10:0,30,650	1/1:7,12:24:54.10:1513,54,0	1/1:7,20:27:75.26:2520,75,0	1/1:4,22:27:66.23:2293,66,0	1/1:14,11:29:84.26:2521,84,0	1/1:3,18:24:59.97:2084,60,0	1/1:7,10:19:48.15:1425,48,0	1/1:6,17:25:54.18:1843,54,0	1/1:6,26:32:81.28:2820,81,0	1/1:2,18:22:57.20:2020,57,0	1/1:6,15:24:54.19:1919,54,0	1/1:5,17:25:54.19:1869,54,0	1/1:6,18:28:65.81:2343,66,0	1/1:6,18:24:51.18:1813,51,0	1/1:4,5:12:27.09:956,27,0	1/1:16,11:27:72.25:2357,72,0	1/1:4,13:17:45.07:1343,45,0	1/1:6,6:12:21.07:746,21,0	1/1:1,4:6:15.05:472,15,0	1/1:2,12:16:35.95:1255,36,0	1/1:7,10:17:30.06:927,30,0	1/1:3,14:18:45.11:1512,45,0	1/1:8,16:27:75.24:2359,75,0	1/1:5,19:26:72.20:2386,72,0	1/1:2,5:8:15.05:523,15,0
chr10	93698572	.	C	CTTT	3521.55	PASS	AB=0.621;AC=47;AF=0.839;AN=56;BaseQRankSum=-0.825;DP=461;FS=18.197;HRun=0;HaplotypeScore=105.6610;InbreedingCoeff=0.4515;MQ=77.55;MQ0=4;MQRankSum=-4.718;QD=9.57;ReadPosRankSum=4.874;VQSLOD=1.8826;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:28.66:0,29,219	1/1:4,0:4:0.12:12,0,0	0/0:41,0:26:66.61:0,67,1005	0/0:26,0:19:53.94:0,54,711	1/1:1,2:16:38.91:302,39,0	1/1:1,0:12:14.78:106,15,0	1/1:4,1:16:10.55:197,11,0	1/1:20,1:25:21.19:211,21,0	1/1:1,1:13:19.45:176,19,0	1/1:6,0:8:5.02:102,5,0	1/1:4,0:13:13.34:119,13,0	1/1:5,0:9:14.05:145,14,0	1/1:2,0:13:20.51:147,21,0	1/1:1,0:12:10.04:86,10,0	1/1:4,0:14:7:55,7,0	1/1:1,0:9:7.80:54,8,0	1/1:5,1:31:38.03:321,38,0	1/1:2,0:11:16.95:111,17,0	1/1:18,0:23:1.78:180,2,0	1/1:9,0:18:20.66:117,21,0	0/1:4,0:14:29.96:30,0,30	1/1:2,0:7:6.05:61,6,0	1/1:0,0:12:19.52:127,20,0	1/1:1,0:8:10.47:86,10,0	1/1:6,0:15:36.65:276,37,0	0/1:10,0:19:32.85:86,0,33	0/1:7,0:20:9.53:10,0,11	1/1:6,1:21:50.27:405,50,0
chr10	93698585	.	T	TTA	1694.54	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=5.241;DP=491;FS=23.980;HRun=0;HaplotypeScore=92.8580;InbreedingCoeff=-0.3958;MQ=66.33;MQ0=5;MQRankSum=-2.802;QD=4.77;ReadPosRankSum=7.692;VQSLOD=0.6360;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,11:25:41.87:438,42,0	0/1:7,0:7:23.61:24,0,36	0/0:39,0:21:34.05:0,34,351	0/0:20,0:10:25.77:0,26,265	0/1:19,0:19:73.81:128,0,74	0/1:15,0:15:50.16:50,0,116	0/1:15,0:16:72.08:72,0,72	0/1:25,0:23:73.54:74,0,185	0/1:12,0:12:3.44:101,0,3	0/1:9,0:9:4.75:5,0,103	0/1:12,0:13:36.51:37,0,41	0/1:10,0:10:42.88:80,0,43	0/1:12,0:12:44.60:64,0,45	0/1:16,0:16:14.28:14,0,88	0/1:12,0:12:29.55:56,0,30	0/1:11,0:11:32.27:32,0,61	0/1:34,0:36:99:108,0,132	0/1:13,0:12:1.90:67,0,2	0/1:20,0:20:41.18:41,0,121	0/0:20,0:20:11.36:0,11,164	0/0:17,0:16:23.18:0,23,148	0/1:6,0:7:26.62:27,0,32	1/1:12,0:12:8.70:85,9,0	0/1:13,0:13:41.29:41,0,83	0/1:23,0:23:99:115,0,122	0/0:19,0:19:22.62:0,23,214	0/0:20,0:20:17.58:0,18,172	0/1:24,0:24:58.42:200,0,58
chr10	93699205	.	CT	C	1073.38	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.509;DP=707;FS=0.000;HRun=2;HaplotypeScore=65.1381;InbreedingCoeff=0.9775;MQ=73.50;MQ0=0;MQRankSum=-0.640;QD=34.63;ReadPosRankSum=0.842;VQSLOD=3.8439;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:90.29:1168,90,0	0/0:7,0:7:21.07:0,21,315	0/0:9,0:10:22.70:0,23,310	0/0:13,0:13:15.01:0,15,300	0/0:33,0:33:96.31:0,96,1407	0/0:25,0:25:75.25:0,75,1102	0/0:17,0:17:51.16:0,51,740	0/0:36,0:36:99:0,99,1461	0/0:33,0:33:96.32:0,96,1413	0/0:26,0:26:78.26:0,78,1154	0/0:29,0:29:87.28:0,87,1284	0/0:30,0:30:90.27:0,90,1276	0/0:24,0:24:72.23:0,72,1059	0/0:22,0:22:66.22:0,66,989	0/0:33,0:33:99:0,99,1483	0/0:34,0:34:99:0,102,1510	0/0:23,0:23:62.98:0,63,943	0/0:14,0:14:39.13:0,39,585	0/0:32,0:32:92.94:0,93,1334	0/0:34,0:34:99:0,102,1524	0/0:16,0:16:48.16:0,48,713	0/0:29,0:29:87.28:0,87,1285	0/0:30,0:30:87.29:0,87,1291	0/0:26,0:26:78.24:0,78,1132	0/0:22,0:22:63.20:0,63,926	0/0:32,0:32:96.32:0,96,1416	0/0:35,0:35:99:0,102,1514	0/0:11,0:11:33.10:0,33,475
chr10	93700299	.	TTTTCTTTC	T	420.97	PASS	AB=0.958;AC=4;AF=0.071;AN=56;BaseQRankSum=3.588;DP=491;FS=7.095;HRun=0;HaplotypeScore=125.3761;InbreedingCoeff=0.4647;MQ=60.14;MQ0=1;MQRankSum=-3.807;QD=9.35;ReadPosRankSum=0.568;VQSLOD=1.9942;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:33.01:0,33,658	0/0:5,0:5:12.04:0,12,500	0/0:9,0:5:8.69:0,9,81	0/1:14,0:9:3.80:4,0,371	0/0:26,0:26:72.23:0,72,2643	0/0:21,0:21:48.16:0,48,1847	0/0:22,0:22:57.15:0,57,1994	0/0:32,0:32:63.18:0,63,2004	0/0:13,0:13:33.11:0,33,1340	0/0:26,0:26:57.19:0,57,2209	0/0:24,0:24:63.19:0,63,2296	0/0:15,0:15:42.14:0,42,1668	0/0:20,0:20:57.20:0,57,2218	0/0:16,0:16:45.15:0,45,1753	0/0:22,0:22:60.21:0,60,2318	0/0:18,0:18:51.18:0,51,1894	1/1:6,13:17:21.06:473,21,0	0/1:10,1:10:51.52:52,0,885	0/0:24,0:24:54.16:0,54,1478	0/0:21,0:21:57.16:0,57,1828	0/0:6,0:6:12.04:0,12,316	0/0:7,0:7:21.07:0,21,784	0/0:13,0:13:30.03:0,30,1030	0/0:17,0:17:45.15:0,45,1848	0/0:12,0:12:24.08:0,24,919	0/0:24,0:24:69.21:0,69,2151	0/0:19,0:19:30.07:0,30,863	0/0:17,0:17:36.12:0,36,1312
chr10	93700306	.	T	TC	253.52	PASS	AB=0.667;AC=1;AF=0.018;AN=56;BaseQRankSum=1.164;DP=502;FS=12.737;HRun=1;HaplotypeScore=59.5112;InbreedingCoeff=0.4280;MQ=61.86;MQ0=1;MQRankSum=-2.739;QD=15.84;ReadPosRankSum=-1.563;VQSLOD=1.9525;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,8:15:3.04:328,0,3	0/0:4,0:4:12.04:0,12,156	0/0:10,0:6:14.78:0,15,166	0/0:16,0:10:14.05:0,14,192	0/0:30,0:30:87.17:0,87,1078	0/0:21,0:21:63.20:0,63,805	0/0:22,0:22:66.20:0,66,843	0/0:30,0:30:90.25:0,90,1090	0/0:12,0:12:36.12:0,36,467	0/0:25,0:25:72.21:0,72,890	0/0:23,0:23:66.21:0,66,856	0/0:16,0:16:48.14:0,48,608	0/0:22,0:22:63.20:0,63,805	0/0:15,0:15:45.15:0,45,584	0/0:23,0:23:66.20:0,66,842	0/0:21,0:21:60.17:0,60,750	0/0:17,0:16:24.50:0,24,175	0/0:11,0:10:29.58:0,30,359	0/0:25,0:24:69.16:0,69,840	0/0:21,0:21:63.19:0,63,803	0/0:6,0:6:15.05:0,15,195	0/0:11,0:11:33.03:0,33,393	0/0:13,0:13:38.99:0,39,453	0/0:16,0:16:45.15:0,45,584	0/0:13,0:13:36.08:0,36,426	0/0:26,0:26:72.23:0,72,934	0/0:19,0:19:48.08:0,48,549	0/0:18,0:18:51.17:0,51,661
chr10	93700319	.	C	CT	1955.12	PASS	AB=0.889;AC=11;AF=0.196;AN=56;BaseQRankSum=-10.282;DP=525;FS=0.480;HRun=9;HaplotypeScore=57.1292;InbreedingCoeff=0.8799;MQ=67.25;MQ0=2;MQRankSum=1.845;QD=18.44;ReadPosRankSum=-0.734;VQSLOD=3.4906;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:23.53:0,24,182	0/0:4,0:4:12:0,12,104	0/0:18,0:14:20.14:0,20,153	0/0:17,0:11:16.56:0,17,130	0/0:34,0:35:95.01:0,95,813	0/0:18,0:18:47.98:0,48,417	0/0:22,0:22:29.86:0,30,484	0/0:25,0:25:59.97:0,60,521	0/0:15,0:15:41.99:0,42,364	0/0:21,0:21:53.98:0,54,469	0/0:27,0:27:65.98:0,66,572	0/0:16,0:16:44.99:0,45,390	0/0:27,1:28:38.77:0,39,561	0/0:17,0:17:44.98:0,45,391	0/0:26,0:26:65.97:0,66,572	0/0:26,0:26:56.96:0,57,495	0/0:20,0:19:33.60:0,34,213	0/0:14,0:13:15.21:0,15,217	1/1:5,15:19:42.11:465,42,0	1/1:2,14:18:44.79:460,45,0	1/1:1,4:5:9.02:100,9,0	0/0:11,0:12:32.01:0,32,263	0/0:13,0:13:29.92:0,30,260	0/0:18,0:18:50.99:0,51,443	0/0:14,0:14:38.96:0,39,334	1/1:6,24:30:26.09:734,26,0	1/1:3,13:16:33.09:365,33,0	0/1:14,2:16:6.20:6,0,181
chr10	93700361	.	GA	G	252.83	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.369;DP=535;FS=0.000;HRun=8;HaplotypeScore=60.3577;InbreedingCoeff=0.9170;MQ=79.98;MQ0=0;MQRankSum=-1.588;QD=18.06;ReadPosRankSum=-0.782;VQSLOD=3.2159;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:36.06:348,36,0	0/0:3,0:3:9.03:0,9,108	0/0:18,0:18:33.35:0,33,381	0/0:15,0:14:28.42:0,28,342	0/0:32,0:32:90.28:0,90,1087	0/0:21,0:21:57.17:0,57,679	0/0:18,0:18:48.13:0,48,559	0/0:29,0:29:81.25:0,81,977	0/0:16,0:16:48.15:0,48,577	0/0:29,0:29:78.21:0,78,927	0/0:29,0:29:72.22:0,72,862	0/0:17,0:17:48.15:0,48,580	0/0:32,0:32:96.28:0,96,1146	0/0:18,0:18:51.13:0,51,593	0/0:19,0:19:57.17:0,57,689	0/0:24,0:24:63.19:0,63,761	0/0:21,0:20:42.10:0,42,490	0/0:14,0:13:39.12:0,39,469	0/0:15,0:15:39.12:0,39,470	0/0:15,0:15:36.11:0,36,429	0/0:4,0:4:12.04:0,12,145	0/0:18,0:18:51.15:0,51,609	0/0:17,0:17:48.15:0,48,579	0/0:14,0:14:36.09:0,36,422	0/0:20,0:20:60.18:0,60,725	0/0:26,1:27:46.33:0,46,838	0/0:22,0:22:63.19:0,63,761	0/0:13,0:14:35.98:0,36,412
chr10	93701848	.	G	GT	803.77	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.042;DP=506;FS=0.843;HRun=1;HaplotypeScore=48.2982;InbreedingCoeff=0.9605;MQ=71.02;MQ0=0;MQRankSum=-1.301;QD=40.19;ReadPosRankSum=0.610;VQSLOD=3.9269;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:60.20:899,60,0	0/0:9,0:9:27.09:0,27,350	0/0:11,0:11:26.98:0,27,304	0/0:7,0:7:12.03:0,12,147	0/0:26,0:26:78.04:0,78,981	0/0:19,0:19:54.18:0,54,700	0/0:14,0:14:39.11:0,39,491	0/0:31,0:31:84.27:0,84,1089	0/0:17,0:17:48.16:0,48,623	0/0:26,0:26:78.25:0,78,1010	0/0:27,0:27:78.23:0,78,991	0/0:21,0:21:60.19:0,60,776	0/0:19,0:19:54.17:0,54,699	0/0:14,0:14:42.14:0,42,542	0/0:26,0:26:75.24:0,75,973	0/0:21,0:21:63.20:0,63,818	0/0:8,0:8:24.08:0,24,309	0/0:10,0:10:27.09:0,27,350	0/0:18,0:18:54.17:0,54,687	0/0:30,0:30:90.28:0,90,1154	0/0:9,0:9:27.09:0,27,351	0/0:9,0:9:21.07:0,21,273	0/0:14,0:14:42.14:0,42,544	0/0:12,0:12:36.12:0,36,467	0/0:24,0:24:72.23:0,72,935	0/0:22,0:22:66.21:0,66,857	0/0:26,0:26:78.24:0,78,995	0/0:16,0:16:39.13:0,39,506
chr10	93703009	.	GGAGAGAGA	G	758.64	PASS	AB=0.885;AC=18;AF=0.346;AN=52;BaseQRankSum=3.841;DP=406;FS=52.439;HRun=0;HaplotypeScore=110.7856;InbreedingCoeff=0.2604;MQ=63.01;MQ0=12;MQRankSum=-3.740;QD=4.19;ReadPosRankSum=-0.439;VQSLOD=-0.3473;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:21:18.06:0,18,348	1/1:1,2:3:3.01:74,3,0	./.	./.	0/0:13,0:13:3.95:0,4,45	0/1:16,0:15:0.56:1,0,87	0/1:17,0:19:13.84:14,0,93	0/0:17,0:16:0:0,0,0	1/1:6,0:9:6.02:112,6,0	0/1:14,3:17:19.71:98,0,20	0/1:15,0:14:0:0,0,0	0/0:17,0:17:11.85:0,12,165	0/0:10,0:10:6:0,6,73	0/1:7,0:10:3.92:4,0,104	1/1:15,5:20:3.14:214,3,0	1/1:13,0:15:15.04:243,15,0	0/0:20,0:20:0:0,0,0	1/1:17,0:16:5.96:44,6,0	0/0:12,0:12:9.03:0,9,178	0/0:12,0:11:12.02:0,12,248	0/0:13,0:12:18.04:0,18,375	0/0:11,0:11:6.01:0,6,59	0/1:14,0:15:0.94:1,0,106	0/0:14,0:19:11.99:0,12,121	0/1:11,0:11:20.34:49,0,20	0/0:20,0:18:24.08:0,24,672	0/0:8,0:8:9.03:0,9,233	0/1:6,0:10:10.96:50,0,11
chr10	93703595	.	CAGTG	C	7261.20	PASS	AB=0.947;AC=25;AF=0.446;AN=56;BaseQRankSum=13.404;DP=709;FS=10.883;HRun=0;HaplotypeScore=125.6962;InbreedingCoeff=0.9218;MQ=76.32;MQ0=4;MQRankSum=-1.141;QD=27.30;ReadPosRankSum=4.352;VQSLOD=4.0834;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,22:28:57.15:914,57,0	1/1:2,5:7:15.05:249,15,0	0/0:26,0:22:28.33:0,28,564	0/0:50,0:42:51.03:0,51,1006	1/1:9,13:21:27.02:448,27,0	0/0:18,0:18:39.13:0,39,933	0/0:40,0:40:99:0,102,2505	1/1:18,16:33:45.14:714,45,0	1/1:5,9:14:24.08:398,24,0	1/1:5,14:18:36.12:597,36,0	1/1:5,12:17:14.98:249,15,0	0/0:34,0:34:75.24:0,75,1759	0/0:24,0:24:51.17:0,51,1188	0/0:20,0:20:45.15:0,45,1105	1/1:5,24:29:62.89:1044,63,0	1/1:10,19:29:48.16:796,48,0	0/0:37,0:37:99:0,99,2370	1/1:6,15:21:39.13:647,39,0	0/0:22,0:22:39.13:0,39,888	0/0:14,0:14:30.10:0,30,732	0/0:61,1:62:91.72:0,92,3243	0/0:13,0:13:24.08:0,24,590	0/0:20,0:20:36.12:0,36,846	0/0:39,0:39:81.28:0,81,1991	1/1:2,19:21:48.16:796,48,0	0/1:17,1:18:63.37:63,0,702	0/0:23,0:23:60.21:0,60,1421	1/1:0,7:7:21.07:348,21,0
chr10	93704388	.	TTTC	T	5422.65	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=-6.905;DP=548;FS=9.656;HRun=0;HaplotypeScore=104.8713;InbreedingCoeff=0.2531;MQ=64.83;MQ0=13;MQRankSum=1.382;QD=10.49;ReadPosRankSum=1.373;VQSLOD=3.9580;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:38.04:362,38,0	0/1:4,0:3:0.96:1,0,5	0/1:28,0:12:3.44:3,0,152	0/0:16,0:8:17.78:0,18,170	1/1:22,0:22:33.49:236,33,0	1/1:15,1:16:15:160,15,0	1/1:23,2:25:21.04:253,21,0	1/1:34,0:34:3.93:343,4,0	0/0:15,0:15:1.36:0,1,4	1/1:13,0:13:20.81:174,21,0	1/1:26,0:26:36.72:243,37,0	1/1:18,2:19:48.03:390,48,0	1/1:23,1:24:62.36:501,62,0	1/1:18,0:18:39.41:255,39,0	1/1:19,0:19:3.96:103,4,0	0/1:19,0:19:12.62:125,0,13	0/1:23,0:23:1.17:168,0,1	0/1:15,0:14:8.30:64,0,8	1/1:20,0:19:5.09:258,5,0	1/1:25,0:23:8.68:181,9,0	0/1:19,0:19:24.35:127,0,24	1/1:14,1:14:34.84:279,35,0	1/1:9,1:10:24.88:226,25,0	1/1:16,0:16:20.16:157,20,0	1/1:26,0:26:17.86:321,18,0	1/1:22,0:21:9.35:215,9,0	1/1:28,0:27:3.54:229,4,0	1/1:10,0:10:6.42:48,6,0
chr10	93704389	.	TTC	T	7503.20	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-2.686;DP=542;FS=15.851;HRun=0;HaplotypeScore=89.5895;InbreedingCoeff=0.6398;MQ=62.89;MQ0=13;MQRankSum=2.140;QD=14.24;ReadPosRankSum=3.427;VQSLOD=3.6713;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:38.84:363,39,0	1/1:4,0:3:3.35:16,3,0	0/1:27,0:11:3.35:3,0,146	0/0:15,0:7:17.16:0,17,146	1/1:22,1:23:53.39:396,53,0	1/1:1,14:15:15.05:200,15,0	1/1:5,19:24:21.06:259,21,0	1/1:36,1:36:62.60:518,63,0	1/1:15,0:15:4.97:17,5,0	1/1:14,0:14:35.84:234,36,0	1/1:26,0:26:38.13:268,38,0	1/1:18,2:19:49.77:433,50,0	1/1:21,3:24:62.71:566,63,0	1/1:17,1:18:44.86:347,45,0	1/1:19,0:19:31.15:210,31,0	1/1:19,0:19:36.41:242,36,0	1/1:23,0:23:50.59:316,51,0	1/1:13,0:12:16.76:113,17,0	1/1:18,0:17:30.25:339,30,0	1/1:24,1:23:45.59:310,46,0	1/1:20,0:20:22.17:203,22,0	1/1:1,14:14:35.63:335,36,0	1/1:9,1:10:25.04:234,25,0	1/1:2,13:15:20.97:241,21,0	1/1:25,1:26:59.92:486,60,0	1/1:21,0:20:35.63:341,36,0	1/1:27,0:26:47.83:358,48,0	1/1:11,0:11:27.60:151,28,0
chr10	93704390	.	TC	T	8582.03	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-0.996;DP=541;FS=1.284;HRun=1;HaplotypeScore=78.6341;InbreedingCoeff=0.6695;MQ=61.88;MQ0=13;MQRankSum=-0.945;QD=16.32;ReadPosRankSum=2.575;VQSLOD=5.1868;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:42.54:369,43,0	1/1:3,1:3:5.74:37,6,0	0/1:25,0:10:3.11:3,0,139	0/0:14,0:7:16.53:0,17,119	1/1:22,1:23:56.50:475,57,0	1/1:15,0:15:15.01:140,15,0	1/1:23,0:23:21.01:193,21,0	1/1:35,3:37:89.74:650,90,0	1/1:15,1:16:5.92:40,6,0	1/1:15,0:15:38.60:299,39,0	1/1:1,25:26:38.56:276,39,0	1/1:18,2:19:49.84:403,50,0	1/1:24,1:25:65.72:553,66,0	1/1:17,1:18:44.30:348,44,0	1/1:16,1:17:41.99:330,42,0	1/1:19,0:19:51.40:370,51,0	1/1:21,1:22:62.28:462,62,0	1/1:13,0:12:25.71:152,26,0	1/1:15,3:17:45.32:409,45,0	1/1:22,2:22:55.01:399,55,0	1/1:19,0:19:37.06:265,37,0	1/1:15,0:14:35.60:275,36,0	1/1:10,0:10:25.65:215,26,0	1/1:14,1:15:19.45:173,19,0	1/1:23,3:26:72.74:593,73,0	1/1:21,1:21:46.19:444,46,0	1/1:25,2:26:68.18:491,68,0	1/1:11,0:11:31.18:218,31,0
chr10	93704393	.	T	TC	4274.53	PASS	AB=0.989;AC=36;AF=0.643;AN=56;BaseQRankSum=-0.085;DP=543;FS=152.812;HRun=0;HaplotypeScore=92.4470;InbreedingCoeff=-0.1133;MQ=57.28;MQ0=18;MQRankSum=3.353;QD=8.98;ReadPosRankSum=9.401;VQSLOD=1.9400;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:38.21:0,38,405	1/1:4,0:3:2.98:23,3,0	0/0:28,0:7:11.89:0,12,84	0/0:17,0:6:7.56:0,8,99	0/1:21,0:21:24.14:221,0,24	0/1:17,0:17:15.73:20,0,16	0/1:22,0:22:2.24:20,0,2	0/1:36,1:36:22.75:331,0,23	1/1:3,12:16:5.52:27,6,0	1/1:5,12:17:6.92:192,7,0	1/1:25,1:26:21.20:163,21,0	0/1:19,0:18:27.18:161,0,27	1/1:23,0:23:20.92:288,21,0	1/1:18,0:18:10.98:217,11,0	0/1:18,0:18:14.14:183,0,14	1/1:18,0:18:7.42:204,7,0	1/1:19,2:21:6.85:320,7,0	0/1:11,2:12:56.78:104,0,57	0/1:18,0:17:3.91:231,0,4	0/1:25,0:23:39.73:237,0,40	1/1:19,0:19:15.71:179,16,0	0/1:14,0:13:9.84:95,0,10	1/1:11,0:11:6.95:139,7,0	0/1:15,0:15:1.67:23,0,2	1/1:25,0:25:20.83:277,21,0	0/1:21,0:20:58.38:221,0,58	0/1:27,0:26:34.32:271,0,34	0/1:11,0:11:18.82:125,0,19
chr10	93704828	.	CT	C	1361.28	PASS	AB=0.952;AC=46;AF=0.821;AN=56;BaseQRankSum=-2.417;DP=328;FS=0.773;HRun=13;HaplotypeScore=64.2126;InbreedingCoeff=0.5415;MQ=66.01;MQ0=17;MQRankSum=0.583;QD=5.58;ReadPosRankSum=3.305;VQSLOD=2.0983;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:47.53:0,48,308	1/1:5,0:5:8.94:33,9,0	0/0:40,0:9:17.60:0,18,116	0/0:24,0:6:16.68:0,17,112	1/1:14,0:13:6.30:31,6,0	1/1:2,7:10:22.91:159,23,0	1/1:4,10:14:25.89:181,26,0	1/1:7,0:7:10.62:34,11,0	1/1:7,0:7:9.94:49,10,0	1/1:8,0:8:12.71:62,13,0	1/1:7,0:6:6.52:22,7,0	1/1:3,4:7:8.94:65,9,0	1/1:4,12:15:20.87:153,21,0	1/1:2,8:10:14.91:109,15,0	1/1:3,0:3:1.56:7,2,0	0/1:3,0:3:0.01:0,0,0	0/1:25,3:28:45.08:45,0,154	1/1:14,0:11:8.71:34,9,0	1/1:9,0:7:3.82:18,4,0	1/1:11,0:11:11.94:54,12,0	0/0:3,0:3:0:0,0,0	1/1:4,4:10:10:56,10,0	1/1:2,17:18:22.68:169,23,0	1/1:3,6:10:16.94:115,17,0	1/1:8,0:7:2.19:7,2,0	1/1:7,0:7:13.75:48,14,0	1/1:14,0:14:5.84:51,6,0	1/1:3,0:3:2.04:6,2,0
chr10	93704982	.	AT	A	1515.45	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.827;DP=427;FS=0.471;HRun=10;HaplotypeScore=46.4594;InbreedingCoeff=0.9736;MQ=64.77;MQ0=3;MQRankSum=-0.245;QD=15.00;ReadPosRankSum=1.566;VQSLOD=3.5232;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:26:40.74:120,41,0	0/0:5,0:5:15.04:0,15,166	0/0:8,0:7:14.86:0,15,134	0/0:8,0:8:15.50:0,16,175	0/0:23,0:23:45.12:0,45,498	0/0:16,1:17:25.07:0,25,492	0/0:16,0:16:41.96:0,42,464	0/0:21,0:21:42.11:0,42,465	0/0:9,0:9:24.02:0,24,245	0/0:15,0:15:39.06:0,39,418	0/0:16,0:17:36.57:0,37,399	0/0:10,0:9:24.06:0,24,266	0/0:17,0:17:33.07:0,33,354	0/0:10,0:10:24.06:0,24,266	0/0:14,0:14:33.09:0,33,361	0/0:5,0:5:12.03:0,12,133	0/0:29,0:29:75.20:0,75,829	0/0:29,1:30:49.14:0,49,766	1/1:2,9:10:26.99:234,27,0	1/1:3,16:19:44.97:391,45,0	1/1:2,12:14:32.99:286,33,0	0/0:13,0:13:30.08:0,30,332	0/0:19,0:19:54.11:0,54,577	0/0:18,0:20:48.13:0,48,528	0/0:8,0:9:17.80:0,18,153	1/1:2,15:17:11.81:331,12,0	1/1:0,13:13:38.99:339,39,0	0/0:11,0:11:24.06:0,24,265
chr10	93705349	.	TA	T	4601.07	PASS	AB=0.875;AC=29;AF=0.537;AN=54;BaseQRankSum=10.279;DP=521;FS=2.069;HRun=12;HaplotypeScore=59.0495;InbreedingCoeff=0.8864;MQ=71.17;MQ0=2;MQRankSum=0.305;QD=16.98;ReadPosRankSum=3.936;VQSLOD=5.9865;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/1:6,1:7:2.19:2,0,162	0/0:18,0:14:26.91:0,27,248	0/0:14,0:10:0.19:0,0,50	0/0:26,1:27:42.87:0,43,602	1/1:3,14:17:38.84:302,39,0	1/1:0,15:15:38.85:302,39,0	0/0:31,1:32:45.91:0,46,646	0/0:13,0:13:33.05:0,33,328	0/0:32,3:35:46.67:0,47,813	0/0:30,0:31:77.87:0,78,740	1/1:1,14:16:28.93:215,29,0	1/1:6,12:19:29.81:226,30,0	1/1:1,23:25:61.81:470,62,0	0/0:21,0:21:57.11:0,57,578	0/0:18,0:19:45.09:0,45,455	1/1:5,19:25:55.41:411,55,0	0/0:17,0:17:42.04:0,42,415	1/1:6,14:19:41.82:325,42,0	1/1:2,23:25:65.12:498,65,0	1/1:1,11:13:1.76:185,2,0	1/1:3,7:11:22.95:168,23,0	1/1:1,12:15:37.13:268,37,0	1/1:1,10:11:26.89:209,27,0	0/0:13,0:13:39.07:0,39,391	1/1:2,25:27:74.71:580,75,0	1/1:1,23:25:34.36:440,34,0	0/0:9,0:10:26.86:0,27,244
chr10	93706661	.	ATATG	A	1117.47	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.192;DP=533;FS=10.210;HRun=0;HaplotypeScore=81.8124;InbreedingCoeff=0.9715;MQ=62.08;MQ0=0;MQRankSum=-1.720;QD=37.25;ReadPosRankSum=1.714;VQSLOD=3.2247;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:29:69.24:1212,69,0	0/0:6,0:6:18.06:0,18,463	0/0:12,0:12:27.51:0,28,732	0/0:6,0:6:15.05:0,15,372	0/0:23,0:23:63.20:0,63,1595	0/0:22,0:22:66.21:0,66,1610	0/0:14,0:14:33.07:0,33,746	0/0:33,0:33:93.31:0,93,2359	0/0:16,0:16:42.14:0,42,1091	0/0:24,0:24:66.22:0,66,1666	0/0:16,0:16:39.13:0,39,993	0/0:15,0:15:39.13:0,39,1021	0/0:12,0:12:36.10:0,36,836	0/0:19,0:19:54.17:0,54,1356	0/0:23,0:23:66.21:0,66,1632	0/0:14,0:14:39.12:0,39,968	0/0:27,0:27:75.24:0,75,1860	0/0:25,0:24:69.24:0,69,1770	0/0:19,0:19:48.16:0,48,1243	0/0:24,0:24:63.22:0,63,1633	0/0:18,0:18:48.07:0,48,1130	0/0:9,0:9:24.08:0,24,629	0/0:16,0:16:45.14:0,45,1125	0/0:21,0:21:51.18:0,51,1325	0/0:20,0:20:57.20:0,57,1465	0/0:28,0:28:84.28:0,84,2139	0/0:28,0:28:78.22:0,78,1794	0/0:13,0:13:24.08:0,24,628
chr10	93706913	.	T	TA	12340.83	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.270;DP=444;FS=4.260;HRun=8;HaplotypeScore=37.0435;InbreedingCoeff=0.7254;MQ=65.12;MQ0=0;MQRankSum=-2.167;QD=28.30;ReadPosRankSum=1.386;VQSLOD=5.1247;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:37.45:667,37,0	1/1:0,7:7:21.06:242,21,0	0/0:4,0:4:2.99:0,3,27	0/0:4,0:4:5.60:0,6,38	1/1:4,25:29:69.08:752,69,0	1/1:2,20:22:54.16:623,54,0	1/1:3,4:7:12.04:139,12,0	1/1:2,28:30:84.25:969,84,0	1/1:3,11:14:30.09:346,30,0	1/1:2,16:18:48.14:553,48,0	1/1:2,23:25:72.17:814,72,0	1/1:4,4:8:9.03:104,9,0	1/1:1,8:10:24.05:259,24,0	1/1:4,8:11:21.06:242,21,0	1/1:2,14:16:36.11:416,36,0	1/1:1,14:15:39.12:450,39,0	1/1:1,21:22:60.18:692,60,0	1/1:3,23:27:62.93:690,63,0	1/1:2,20:22:60.18:692,60,0	1/1:2,17:19:54.15:614,54,0	1/1:0,4:4:12.04:138,12,0	1/1:1,5:6:12.04:138,12,0	1/1:1,9:10:21.05:242,21,0	1/1:1,8:9:21.06:242,21,0	1/1:3,15:17:45.13:520,45,0	1/1:1,15:16:45.13:519,45,0	1/1:4,28:32:81.22:922,81,0	1/1:2,12:14:8.64:353,9,0
chr10	93707102	.	A	ATG	5115.98	PASS	AB=0.827;AC=40;AF=0.741;AN=54;BaseQRankSum=-1.296;DP=489;FS=0.681;HRun=0;HaplotypeScore=103.1478;InbreedingCoeff=-0.0811;MQ=57.18;MQ0=7;MQRankSum=-0.518;QD=12.36;ReadPosRankSum=-1.309;VQSLOD=4.2831;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:39:12.47:0,12,120	1/1:3,0:5:6.90:75,7,0	0/0:32,0:5:3:0,3,29	0/1:38,0:14:5.90:6,0,29	1/1:13,1:17:1.81:177,2,0	1/1:14,5:17:26.29:291,26,0	0/1:16,4:20:15.96:168,0,16	1/1:34,1:35:11.08:215,11,0	1/1:10,1:12:10.02:93,10,0	1/1:11,1:13:20.08:167,20,0	0/1:6,1:6:7.05:90,0,7	1/1:7,0:7:1.43:140,1,0	0/1:9,0:9:43.14:43,0,74	1/1:10,1:11:6.02:87,6,0	1/1:5,0:9:9.96:110,10,0	0/1:2,0:9:7.11:67,0,7	0/1:23,15:41:68.58:919,0,69	1/1:19,1:23:3.56:162,4,0	0/1:17,2:19:54.34:235,0,54	0/1:6,3:9:17.21:217,0,17	1/1:16,11:25:31.36:694,31,0	./.	1/1:3,0:3:8.75:80,9,0	0/1:11,2:13:26.02:58,0,26	1/1:8,0:12:9.67:63,10,0	1/1:21,4:26:33.85:455,34,0	0/1:16,7:23:9.64:474,0,10	1/1:4,0:6:3:28,3,0
chr10	93707121	.	T	TGTGTGCGTGC	4068.08	PASS	AB=0.985;AC=30;AF=0.556;AN=54;BaseQRankSum=-5.078;DP=430;FS=1.589;HRun=0;HaplotypeScore=163.9135;InbreedingCoeff=-0.3902;MQ=47.69;MQ0=5;MQRankSum=0.056;QD=12.07;ReadPosRankSum=-3.458;VQSLOD=1.9040;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:28.44:0,28,763	0/1:5,0:5:59.01:66,0,59	0/0:9,0:1:3.01:0,3,45	0/1:26,0:4:5.90:6,0,29	0/1:14,0:14:45.36:143,0,45	1/1:18,3:19:24.55:529,25,0	1/1:24,1:25:22.39:586,22,0	0/1:24,0:24:99:233,0,101	0/1:14,0:14:79.32:79,0,128	0/1:9,0:9:75.42:89,0,75	0/1:10,0:9:32.13:59,0,32	1/1:6,1:7:18.06:460,18,0	0/1:8,0:10:17.40:224,0,17	1/1:8,1:9:9.03:201,9,0	0/1:11,0:11:69.64:70,0,133	0/1:9,0:9:12.61:60,0,13	0/0:45,0:45:31.94:0,32,1172	0/1:18,0:18:88.66:234,0,89	0/1:17,0:17:45.41:45,0,159	0/1:8,0:8:29.27:29,0,143	0/1:27,0:26:99:106,0,505	./.	1/1:4,1:5:12.01:143,12,0	0/1:12,1:13:25.94:58,0,26	0/1:12,0:11:44.06:44,0,86	0/1:19,0:19:99:229,0,202	0/1:19,0:19:99:262,0,142	1/1:4,0:4:3.01:112,3,0
chr10	93707123	.	TGC	T	1350.62	PASS	AB=0.911;AC=24;AF=0.444;AN=54;BaseQRankSum=-5.070;DP=418;FS=13.022;HRun=0;HaplotypeScore=118.9720;InbreedingCoeff=-0.7466;MQ=47.59;MQ0=4;MQRankSum=2.689;QD=3.77;ReadPosRankSum=-3.007;VQSLOD=1.2690;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:31:57.92:58,0,104	0/1:4,1:5:7.64:8,0,66	0/0:9,0:1:3.01:0,3,49	0/1:23,0:3:5.89:6,0,49	0/1:12,2:14:80.58:81,0,113	0/1:20,2:20:87.60:140,0,88	0/1:24,2:26:50.82:51,0,235	0/1:22,1:23:99:117,0,133	0/1:13,0:13:44.43:44,0,93	0/1:9,0:9:29.11:29,0,94	0/1:8,1:8:31.53:32,0,65	0/1:5,2:7:57.41:57,0,67	0/1:11,0:11:1.65:2,0,213	0/1:4,3:7:15.99:58,0,16	0/1:10,1:11:60.01:60,0,104	0/1:9,0:9:15.59:16,0,51	0/0:42,3:45:26.17:0,26,865	0/1:16,1:17:43.69:44,0,175	0/1:15,2:17:45.39:45,0,222	0/1:6,1:7:4.33:4,0,131	0/1:25,3:26:99:114,0,321	./.	0/1:4,1:5:45.72:54,0,46	0/1:11,1:12:26.02:58,0,26	0/1:12,1:12:4.45:4,0,104	0/1:16,2:18:99:174,0,142	0/1:15,3:18:90.64:240,0,91	0/0:4,0:4:8.97:0,9,71
chr10	93707179	.	GATC	G	12574.26	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=-2.855;DP=359;FS=8.229;HRun=0;HaplotypeScore=76.8673;InbreedingCoeff=0.9044;MQ=75.17;MQ0=0;MQRankSum=-4.107;QD=41.23;ReadPosRankSum=0.901;VQSLOD=5.5428;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.30:0,87,1913	1/1:0,4:4:12.04:196,12,0	0/0:6,0:6:15.05:0,15,322	0/0:16,0:16:34.97:0,35,628	1/1:2,6:8:15.05:245,15,0	1/1:2,16:17:42.11:658,42,0	1/1:5,12:17:30.10:483,30,0	1/1:1,36:37:99:1712,105,0	1/1:0,14:14:39.13:637,39,0	1/1:0,11:11:33.11:539,33,0	1/1:1,14:15:39.13:616,39,0	1/1:0,6:6:18.06:294,18,0	1/1:0,6:6:15.05:245,15,0	1/1:0,5:5:15.05:244,15,0	1/1:0,7:7:18.06:294,18,0	1/1:0,6:6:15.05:245,15,0	1/1:2,32:34:90.29:1442,90,0	1/1:2,13:16:42.14:686,42,0	1/1:0,11:11:30.09:466,30,0	1/1:1,6:7:18.06:293,18,0	1/1:5,29:33:78.27:1273,78,0	./.	1/1:0,2:2:6.02:98,6,0	1/1:0,7:7:12.04:196,12,0	1/1:0,9:9:24.08:391,24,0	1/1:0,14:14:42.14:686,42,0	1/1:0,8:8:18.06:294,18,0	1/1:0,9:9:21.07:343,21,0
chr10	93707301	.	T	TTA	612.56	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=1.327;DP=349;FS=32.573;HRun=0;HaplotypeScore=45.4191;InbreedingCoeff=0.4081;MQ=76.49;MQ0=0;MQRankSum=-1.606;QD=17.02;ReadPosRankSum=-0.105;VQSLOD=1.2178;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,18:24:42.14:702,42,0	0/0:1,0:1:3.01:0,3,38	0/0:8,0:6:4.56:0,5,42	0/1:11,0:11:13.47:13,0,68	0/0:18,0:18:48.15:0,48,603	0/0:19,0:19:48.14:0,48,597	0/0:11,0:11:27.07:0,27,330	0/0:43,0:43:99:0,99,1237	0/0:13,0:13:36.12:0,36,458	0/0:11,0:11:30.10:0,30,382	0/0:14,0:14:33.09:0,33,406	0/0:7,0:7:15.05:0,15,191	0/0:9,0:9:12.03:0,12,142	0/0:4,0:4:9.03:0,9,114	0/0:4,0:4:12:0,12,133	0/0:5,0:5:12.04:0,12,153	0/0:21,0:21:57.18:0,57,726	0/0:23,0:23:54.16:0,54,672	0/0:7,0:7:18.06:0,18,229	0/0:7,0:7:15.05:0,15,191	0/0:8,0:8:18.06:0,18,229	0/0:4,0:4:12.04:0,12,153	0/0:3,0:3:6.02:0,6,76	0/0:3,0:3:6.02:0,6,76	0/0:11,0:11:21.07:0,21,267	0/0:15,0:15:36.10:0,36,446	0/0:21,0:21:51.16:0,51,649	0/0:23,0:23:63.20:0,63,798
chr10	93707830	.	AT	A	4831.80	PASS	AB=0.684;AC=40;AF=0.714;AN=56;BaseQRankSum=4.915;DP=514;FS=0.000;HRun=12;HaplotypeScore=57.0318;InbreedingCoeff=0.7459;MQ=71.33;MQ0=6;MQRankSum=1.509;QD=13.09;ReadPosRankSum=3.420;VQSLOD=4.9569;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,29:34:71.06:542,71,0	1/1:2,5:7:11.95:93,12,0	0/0:13,0:8:11.70:0,12,84	0/0:16,0:11:16.66:0,17,112	1/1:2,9:12:18.03:126,18,0	1/1:3,15:19:37.88:284,38,0	0/1:10,2:14:10.82:90,0,11	1/1:6,16:22:41.32:322,41,0	1/1:1,10:11:20.91:163,21,0	1/1:3,18:21:53.78:418,54,0	1/1:0,9:10:22.96:168,23,0	1/1:2,12:15:28.90:215,29,0	1/1:6,6:12:16.96:122,17,0	1/1:5,10:15:9.36:188,9,0	1/1:4,10:14:19.96:145,20,0	1/1:2,19:21:35.70:278,36,0	1/1:8,25:34:67.76:517,68,0	1/1:3,16:19:38.54:290,39,0	0/0:27,3:27:16.57:0,17,507	0/0:13,0:12:24.03:0,24,231	0/0:17,3:20:1.38:0,1,341	1/1:3,8:11:17.91:139,18,0	1/1:4,11:15:26.88:209,27,0	1/1:5,12:16:29.74:224,30,0	1/1:9,8:16:5.93:46,6,0	0/0:30,3:33:39.70:0,40,716	0/0:18,1:19:18.56:0,19,341	0/1:8,18:26:14.57:254,0,15
chr10	93708013	.	GT	G	930.43	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.705;DP=425;FS=0.745;HRun=1;HaplotypeScore=48.1741;InbreedingCoeff=0.8802;MQ=76.53;MQ0=1;MQRankSum=-0.184;QD=32.08;ReadPosRankSum=2.068;VQSLOD=3.2983;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:55.60:1025,56,0	0/0:4,0:4:12.04:0,12,179	0/0:23,0:24:39.78:0,40,800	0/0:23,0:20:34.59:0,35,580	0/0:10,0:10:30.10:0,30,469	0/0:24,0:24:69.22:0,69,1056	0/0:5,0:5:15.05:0,15,231	0/0:32,0:32:93.29:0,93,1411	0/0:12,0:12:36.12:0,36,562	0/0:3,0:3:9.03:0,9,141	0/0:7,0:7:21.07:0,21,328	0/0:11,0:11:33.11:0,33,513	0/0:12,0:12:36.12:0,36,561	0/0:13,0:13:39.13:0,39,610	0/0:10,0:10:30.10:0,30,469	0/0:10,0:9:30.10:0,30,467	0/0:32,0:32:96.19:0,96,1377	0/0:26,0:26:78.27:0,78,1219	0/0:20,0:20:60.19:0,60,918	0/0:11,0:11:33.08:0,33,461	0/0:18,0:18:54.18:0,54,819	0/0:5,0:5:15.04:0,15,213	0/0:10,0:10:30.09:0,30,445	0/0:16,0:16:42.12:0,42,631	0/0:6,0:6:18.06:0,18,280	0/0:16,0:16:48.10:0,48,683	0/0:19,0:19:57.12:0,57,818	0/0:16,0:16:42.14:0,42,655
chr10	93708157	.	C	CT	399.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.888;DP=313;FS=13.984;HRun=3;HaplotypeScore=61.3050;InbreedingCoeff=0.6207;MQ=77.55;MQ0=0;MQRankSum=-2.205;QD=28.50;ReadPosRankSum=0.012;VQSLOD=1.8387;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:33.05:0,33,359	0/0:2,0:2:6.02:0,6,72	0/0:14,0:14:39.07:0,39,439	0/0:6,0:6:12.04:0,12,144	0/0:12,0:11:20.14:0,20,282	0/0:20,0:20:54.12:0,54,603	0/0:7,0:7:15.05:0,15,180	0/0:43,0:43:99:0,126,1553	0/0:7,0:7:15.05:0,15,179	0/0:8,0:8:24.07:0,24,288	0/0:5,0:5:12.04:0,12,144	0/0:13,0:13:32.92:0,33,395	0/0:12,0:12:36.11:0,36,431	0/0:16,0:16:42.12:0,42,492	0/0:3,0:3:9.03:0,9,107	0/0:10,0:10:24.07:0,24,288	1/1:1,13:14:38.69:493,39,0	0/0:9,0:9:24.07:0,24,286	0/0:13,0:13:39.04:0,39,458	0/0:5,0:5:15.05:0,15,180	0/0:5,0:5:15.05:0,15,180	0/0:2,0:2:3.01:0,3,36	0/0:8,0:8:21.06:0,21,252	0/0:2,0:2:6:0,6,60	0/0:13,0:13:33.10:0,33,396	0/0:14,0:14:33.10:0,33,402	0/0:18,0:18:45.14:0,45,539	0/0:18,0:18:48.15:0,48,575
chr10	93708180	.	T	TAATAAATAAATAAATAAATAAATA	11716.79	PASS	AB=0.603;AC=37;AF=0.685;AN=54;BaseQRankSum=-6.617;DP=324;FS=5.643;HRun=0;HaplotypeScore=202.8171;InbreedingCoeff=0.4594;MQ=62.67;MQ0=0;MQRankSum=-7.247;QD=46.87;ReadPosRankSum=-4.375;VQSLOD=2.8899;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:12:21.07:506,21,0	1/1:4,0:4:9.03:594,9,0	0/0:11,0:11:9.03:0,9,241	0/0:6,0:6:6.02:0,6,174	1/1:9,1:13:12.04:787,12,0	0/0:2,0:21:45.15:0,45,1248	0/1:3,0:9:23.19:23,0,231	1/1:35,0:45:87.24:1692,87,0	1/1:5,1:11:9.03:740,9,0	1/1:10,0:10:21.07:529,21,0	1/1:3,1:6:9.03:471,9,0	0/1:3,0:11:58.73:59,0,448	0/0:1,0:11:24.07:0,24,559	0/0:6,0:15:24.08:0,24,696	1/1:3,0:4:9.03:362,9,0	1/1:6,0:9:12.04:870,12,0	0/1:7,0:21:99:283,0,688	1/1:8,0:10:15.05:784,15,0	1/1:8,0:17:39.12:947,39,0	1/1:3,0:3:6.02:96,6,0	1/1:3,0:3:3.01:77,3,0	0/1:1,0:4:24.80:25,0,105	0/0:2,0:9:14.12:0,14,502	./.	1/1:11,2:16:15.05:1204,15,0	1/1:9,0:16:33.11:849,33,0	1/1:10,0:15:30.06:751,30,0	0/1:5,0:10:10.52:68,0,11
chr10	93708731	.	CT	C	5203.28	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=3.493;DP=527;FS=1.181;HRun=2;HaplotypeScore=60.5978;InbreedingCoeff=0.9939;MQ=77.70;MQ0=0;MQRankSum=-1.706;QD=35.88;ReadPosRankSum=0.795;VQSLOD=5.2685;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:96.31:1246,96,0	0/0:8,0:8:24.08:0,24,359	0/0:17,0:17:48.14:0,48,697	0/0:5,0:5:12.04:0,12,179	0/0:30,0:30:87.28:0,87,1280	0/0:23,0:23:69.22:0,69,1012	0/0:19,0:19:54.18:0,54,810	0/0:28,0:28:81.27:0,81,1197	0/0:17,0:17:48.16:0,48,720	0/0:24,0:24:69.23:0,69,1018	0/0:15,0:15:45.10:0,45,629	0/0:14,0:14:42.13:0,42,609	0/0:18,0:18:51.17:0,51,765	0/0:15,0:15:45.12:0,45,650	0/0:20,0:20:57.19:0,57,853	0/0:17,0:17:51.17:0,51,764	1/1:1,22:23:66.21:857,66,0	0/0:20,0:20:57.19:0,57,854	1/1:2,19:21:57.18:740,57,0	1/1:1,19:20:48.16:623,48,0	1/1:0,16:16:45.15:584,45,0	0/0:17,0:17:48.16:0,48,720	0/0:28,0:28:84.27:0,84,1236	0/0:15,0:15:45.10:0,45,631	0/0:21,0:21:63.21:0,63,942	1/1:0,18:18:54.15:685,54,0	1/1:1,14:15:36.12:467,36,0	0/0:11,0:11:33.08:0,33,453
chr10	93708828	.	C	CAA	1062.98	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.386;DP=498;FS=0.000;HRun=0;HaplotypeScore=70.4247;InbreedingCoeff=0.9625;MQ=69.18;MQ0=0;MQRankSum=-0.825;QD=46.22;ReadPosRankSum=0.130;VQSLOD=4.6730;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:57.20:1158,57,0	0/0:4,0:4:12.03:0,12,172	0/0:18,0:17:45.09:0,45,617	0/0:15,0:15:41.97:0,42,597	0/0:15,0:15:42.14:0,42,684	0/0:18,0:18:54.18:0,54,881	0/0:27,0:27:81.26:0,81,1289	0/0:24,0:24:66.22:0,66,1052	0/0:11,0:11:33.11:0,33,538	0/0:20,0:20:60.20:0,60,958	0/0:7,0:7:21.07:0,21,339	0/0:19,0:19:51.16:0,51,805	0/0:22,0:22:66.23:0,66,1075	0/0:16,0:16:48.15:0,48,757	0/0:25,0:25:72.25:0,72,1174	0/0:21,0:21:63.22:0,63,1025	0/0:25,0:25:75.26:0,75,1220	0/0:19,0:19:51.17:0,51,832	0/0:14,0:14:39.13:0,39,636	0/0:13,0:13:36.12:0,36,587	0/0:49,0:49:99:0,141,2265	0/0:12,0:12:36.12:0,36,587	0/0:9,0:9:24.08:0,24,390	0/0:18,0:18:54.18:0,54,877	0/0:15,0:15:45.15:0,45,732	0/0:10,0:10:30.10:0,30,490	0/0:20,0:20:54.18:0,54,881	0/0:9,0:9:27.09:0,27,441
chr10	93709887	.	AG	A	5668.25	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-2.202;DP=491;FS=0.000;HRun=1;HaplotypeScore=105.7949;InbreedingCoeff=0.4258;MQ=66.75;MQ0=4;MQRankSum=-4.405;QD=11.86;ReadPosRankSum=0.841;VQSLOD=3.1687;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:23.39:132,23,0	1/1:7,1:7:7.48:47,7,0	0/1:23,0:17:4.53:5,0,112	0/0:12,1:7:2.61:0,3,44	1/1:35,0:33:67.83:467,68,0	1/1:26,0:26:56.73:357,57,0	1/1:6,0:6:9.68:54,10,0	1/1:32,0:32:75.78:490,76,0	1/1:12,0:12:28.05:152,28,0	1/1:32,0:32:73.95:493,74,0	1/1:22,0:22:18.87:104,19,0	1/1:11,0:10:19.46:91,19,0	1/1:15,0:14:22.71:136,23,0	1/1:4,0:3:5.50:40,6,0	1/1:18,0:18:41.82:244,42,0	1/1:13,0:13:27.59:146,28,0	1/1:19,0:19:33.26:222,33,0	1/1:9,1:10:19.21:100,19,0	1/1:15,1:16:38.01:252,38,0	1/1:23,1:23:62.15:426,62,0	1/1:3,0:3:8.98:74,9,0	1/1:9,0:9:18.17:105,18,0	1/1:10,0:10:16.86:92,17,0	1/1:5,0:4:2.97:20,3,0	1/1:27,0:26:31.17:174,31,0	1/1:28,3:31:87.17:619,87,0	1/1:24,3:25:61.62:381,62,0	1/1:25,0:24:46.77:246,47,0
chr10	93709892	.	A	AG	1244.65	PASS	AB=0.802;AC=10;AF=0.179;AN=56;BaseQRankSum=-6.636;DP=510;FS=32.197;HRun=0;HaplotypeScore=168.4179;InbreedingCoeff=-0.2421;MQ=70.08;MQ0=3;MQRankSum=3.831;QD=5.23;ReadPosRankSum=2.605;VQSLOD=1.8812;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:32.53:0,33,205	0/0:3,0:7:4.20:0,4,22	0/0:22,0:16:38.48:0,38,354	0/0:17,0:12:15.02:0,15,166	0/1:18,0:31:74.54:91,0,75	0/0:27,0:27:63.51:0,64,425	0/0:7,0:7:12.05:0,12,77	0/1:23,1:39:97.87:324,0,98	0/1:12,0:13:32.10:106,0,32	0/1:14,19:34:79:316,0,79	0/1:0,0:26:54.64:75,0,55	0/0:11,0:10:16:0,16,69	0/0:16,0:15:38.38:0,38,229	0/0:4,0:3:6.18:0,6,33	0/1:20,0:20:41.30:171,0,41	0/1:12,0:13:21.75:75,0,22	0/0:19,0:19:26.76:0,27,160	0/1:9,0:9:18.80:47,0,19	0/0:18,0:18:32.72:0,33,247	0/0:23,0:22:44.23:0,44,300	0/0:2,0:2:3:0,3,27	0/0:8,0:8:19.46:0,19,111	0/0:11,0:11:24.65:0,25,159	0/0:5,0:4:2.97:0,3,20	0/1:14,12:26:8.30:8,0,136	0/0:26,0:26:40.58:0,41,415	0/0:28,0:26:50.45:0,50,360	0/1:23,1:23:99:172,0,121
chr10	93710029	.	CA	C	8040.50	PASS	AB=0.600;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.281;DP=418;FS=6.140;HRun=10;HaplotypeScore=49.0109;InbreedingCoeff=0.6678;MQ=69.80;MQ0=0;MQRankSum=-3.655;QD=20.36;ReadPosRankSum=2.846;VQSLOD=5.7340;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,9:12:26.87:206,27,0	1/1:0,8:8:21:182,21,0	0/0:13,0:13:11.05:0,11,97	0/0:10,0:10:8.06:0,8,146	1/1:3,14:17:35.99:312,36,0	1/1:4,21:25:23.80:436,24,0	1/1:2,16:18:44.99:391,45,0	1/1:5,22:28:67.01:551,67,0	1/1:2,17:19:47.99:417,48,0	1/1:2,16:18:44.98:391,45,0	1/1:4,14:18:41.98:364,42,0	1/1:1,17:18:11.85:331,12,0	1/1:1,14:15:38.99:338,39,0	1/1:2,5:7:11.99:104,12,0	1/1:2,21:23:62.97:547,63,0	1/1:2,9:11:17.98:156,18,0	1/1:0,12:12:35.99:312,36,0	1/1:1,14:15:38.99:339,39,0	1/1:3,14:17:32.95:286,33,0	1/1:1,12:13:35.99:313,36,0	1/1:2,14:16:38.99:339,39,0	1/1:1,2:3:6:52,6,0	1/1:0,9:9:26.99:234,27,0	1/1:1,15:15:41.98:360,42,0	1/1:2,13:15:38.99:339,39,0	1/1:0,12:12:35.99:312,36,0	1/1:10,13:23:38.95:338,39,0	0/1:2,4:6:18.17:89,0,18
chr10	93710041	.	C	CG	75.14	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.071;DP=380;FS=0.000;HRun=0;HaplotypeScore=74.5443;InbreedingCoeff=0.8567;MQ=68.88;MQ0=0;MQRankSum=-4.535;QD=8.35;ReadPosRankSum=0.648;VQSLOD=3.0909;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:26.50:169,27,0	0/0:7,0:7:21.07:0,21,292	0/0:7,0:7:14.98:0,15,189	0/0:10,0:10:22.73:0,23,233	0/0:15,0:15:45.15:0,45,625	0/0:21,0:21:57.19:0,57,795	0/0:17,0:17:48.16:0,48,667	0/0:29,0:29:87.29:0,87,1217	0/0:18,0:18:54.18:0,54,750	0/0:17,0:17:51.17:0,51,706	0/0:16,0:16:48.16:0,48,664	0/0:16,0:16:45.15:0,45,623	0/0:13,0:13:39.13:0,39,540	0/0:5,0:5:15.05:0,15,209	0/0:23,0:23:69.23:0,69,951	0/0:9,0:9:21.07:0,21,293	0/0:12,0:12:36.12:0,36,501	0/0:15,0:15:42.14:0,42,584	0/0:20,0:19:51.17:0,51,712	0/0:12,0:12:36.10:0,36,484	0/0:16,0:16:45.15:0,45,629	0/0:2,0:2:6.02:0,6,84	0/0:9,0:9:27.09:0,27,376	0/0:16,0:15:42.14:0,42,586	0/0:14,0:14:42.14:0,42,586	0/0:12,0:12:33.11:0,33,458	0/0:15,0:15:45.14:0,45,614	0/0:5,0:5:15.05:0,15,206
chr10	93710042	.	ACTTC	A	433.70	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.418;DP=380;FS=1.238;HRun=0;HaplotypeScore=95.8182;InbreedingCoeff=0.8046;MQ=68.62;MQ0=0;MQRankSum=-4.405;QD=48.19;ReadPosRankSum=-0.007;VQSLOD=3.7715;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:27.09:528,27,0	0/0:7,0:7:21.07:0,21,592	0/0:5,1:6:12.51:0,13,292	0/0:10,0:10:8.49:0,8,506	0/0:15,0:15:45.15:0,45,1215	0/0:20,0:20:57.20:0,57,1636	0/0:17,0:17:48.16:0,48,1245	0/0:29,0:29:87.30:0,87,2476	0/0:18,0:18:54.19:0,54,1523	0/0:17,0:17:51.16:0,51,1394	0/0:16,0:16:48.16:0,48,1350	0/0:16,0:16:48.16:0,48,1325	0/0:13,0:13:39.13:0,39,1096	0/0:5,0:5:15.05:0,15,431	0/0:23,0:23:69.24:0,69,1946	0/0:9,0:9:21.07:0,21,607	0/0:13,0:13:39.13:0,39,1063	0/0:16,0:16:45.13:0,45,1194	0/0:20,0:19:57.20:0,57,1627	0/0:12,0:12:33.11:0,33,929	0/0:16,0:16:45.15:0,45,1292	0/0:2,0:2:6.02:0,6,174	0/0:9,0:9:27.09:0,27,777	0/0:17,0:16:45.15:0,45,1255	0/0:14,0:14:42.14:0,42,1190	0/0:11,0:11:33.11:0,33,952	0/0:15,0:15:45.15:0,45,1299	0/0:5,0:5:15.05:0,15,434
chr10	93710255	.	T	TGG	225.51	PASS	AB=0.968;AC=14;AF=0.259;AN=54;BaseQRankSum=4.227;DP=235;FS=0.000;HRun=0;HaplotypeScore=78.4749;InbreedingCoeff=-0.2716;MQ=62.00;MQ0=15;MQRankSum=0.762;QD=1.67;ReadPosRankSum=-1.670;VQSLOD=1.1275;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:2,0:2:6.02:0,6,79	0/0:8,0:6:15.04:0,15,214	0/0:5,0:5:10.72:0,11,124	0/1:12,1:15:8.01:8,0,221	0/1:6,0:6:5.36:5,0,67	0/1:10,0:9:2.09:2,0,143	0/1:11,0:10:93.09:93,0,187	0/0:5,0:5:9.02:0,9,105	0/0:8,0:7:18.01:0,18,220	0/0:8,0:7:9.03:0,9,114	0/1:9,0:7:30.49:30,0,72	0/1:5,0:5:28.30:28,0,39	0/0:8,0:7:18.01:0,18,230	0/0:7,0:7:8.35:0,8,221	0/0:3,0:3:9.03:0,9,133	0/1:9,0:9:5.91:6,0,49	0/0:6,0:6:15.01:0,15,190	0/1:25,0:17:25.98:26,0,146	0/0:12,0:11:18.53:0,19,249	0/0:6,0:4:0.36:0,0,35	0/1:4,0:4:10.72:11,0,54	0/0:8,0:8:1.14:0,1,130	1/1:2,0:2:0.47:1,0,0	0/1:8,3:10:72.37:72,0,196	0/1:12,0:10:59.45:59,0,82	0/1:13,0:13:16.42:16,0,301	0/0:10,0:9:14.15:0,14,317
chr10	93710338	.	A	AT	183.80	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.589;DP=365;FS=7.107;HRun=8;HaplotypeScore=37.4144;InbreedingCoeff=0.6518;MQ=60.77;MQ0=2;MQRankSum=-2.999;QD=20.42;ReadPosRankSum=-1.994;VQSLOD=2.3779;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:24.07:277,24,0	0/0:5,0:5:12.01:0,12,110	0/0:8,0:5:5.29:0,5,100	0/0:22,1:11:11.99:0,12,107	0/0:21,0:21:57.02:0,57,521	0/0:19,0:19:51.02:0,51,467	0/0:6,0:6:18.01:0,18,165	0/0:25,0:25:59.95:0,60,533	0/0:10,0:10:5.54:0,6,223	0/0:15,0:15:35.99:0,36,323	0/0:21,0:21:56.97:0,57,508	0/0:9,0:9:24.01:0,24,220	0/0:13,0:13:39.01:0,39,354	0/0:6,0:6:9:0,9,82	0/0:13,0:12:33:0,33,298	0/0:6,0:6:15.01:0,15,137	0/0:23,0:23:63.02:0,63,571	0/0:16,0:16:39.02:0,39,355	0/0:19,0:18:48.02:0,48,439	0/0:15,0:15:42.90:0,43,383	0/0:15,0:14:39.01:0,39,357	0/0:2,0:2:6:0,6,55	0/0:7,0:7:21.01:0,21,192	0/0:5,0:5:15.01:0,15,137	0/0:14,0:14:42:0,42,379	0/0:16,0:16:36.01:0,36,330	0/0:13,0:13:35.99:0,36,320	0/0:11,0:11:20.99:0,21,192
chr10	93710804	.	T	TA	1058.98	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-3.528;DP=508;FS=11.360;HRun=13;HaplotypeScore=68.8881;InbreedingCoeff=0.8636;MQ=75.19;MQ0=1;MQRankSum=-1.339;QD=9.90;ReadPosRankSum=-2.005;VQSLOD=1.3134;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:30:36.63:0,37,108	0/0:10,0:10:23.78:0,24,163	0/0:18,0:12:5.78:0,6,41	0/1:18,0:13:1.65:28,0,2	0/0:19,0:21:45.63:0,46,296	0/0:13,0:16:36.77:0,37,238	0/0:18,0:18:35.68:0,36,247	0/0:28,0:28:50.48:0,50,348	0/0:15,0:15:41.48:0,41,280	0/0:17,0:17:20.72:0,21,143	0/0:22,0:22:35.28:0,35,237	0/0:14,0:15:37.71:0,38,251	0/0:15,0:16:37.71:0,38,252	0/0:15,0:16:31.69:0,32,209	0/0:18,0:18:47.51:0,48,322	0/0:23,1:25:21.75:0,22,284	0/0:27,0:27:68.31:0,68,470	0/0:15,0:15:32.69:0,33,223	1/1:12,13:27:23.75:309,24,0	1/1:3,9:14:9.11:195,9,0	1/1:3,2:5:9:80,9,0	0/0:10,0:12:15.81:0,16,92	0/0:14,0:14:17.40:0,17,112	0/0:17,0:18:25.67:0,26,164	0/0:18,0:20:10.65:0,11,203	1/1:11,8:19:29.20:255,29,0	1/1:4,20:24:39.04:362,39,0	0/0:9,0:9:10.62:0,11,80
chr10	93711520	.	C	CATAT	695.83	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.719;DP=495;FS=12.618;HRun=0;HaplotypeScore=79.2856;InbreedingCoeff=0.9082;MQ=66.09;MQ0=2;MQRankSum=-1.878;QD=36.62;ReadPosRankSum=2.512;VQSLOD=3.0487;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:19:30.10:790,30,0	0/0:4,0:4:12.02:0,12,189	0/0:22,0:19:51.97:0,52,869	0/0:19,0:18:45.08:0,45,704	0/0:11,0:11:33.09:0,33,559	0/0:29,0:29:80.99:0,81,1375	0/0:14,0:14:39.08:0,39,605	0/0:42,0:42:99:0,114,1773	0/0:21,0:21:54.15:0,54,922	0/0:23,0:23:63.19:0,63,1065	0/0:14,0:14:33.09:0,33,566	0/0:6,0:6:9.01:0,9,134	0/0:20,0:20:51.12:0,51,801	0/0:12,0:12:30.09:0,30,506	0/0:20,0:20:57.15:0,57,939	0/0:12,0:12:30.10:0,30,551	0/0:24,0:24:69.16:0,69,1145	0/0:15,0:15:39.03:0,39,615	0/0:25,0:25:58.07:0,58,969	0/0:17,0:17:45.12:0,45,750	0/0:17,0:17:48.12:0,48,783	0/0:10,0:10:27.09:0,27,496	0/0:12,0:12:30.09:0,30,504	0/0:18,0:18:48.14:0,48,819	0/0:14,0:14:42.14:0,42,765	0/0:20,0:20:54.16:0,54,928	0/0:27,0:27:63.20:0,63,1095	0/0:7,0:7:18.06:0,18,308
chr10	93712297	.	C	CTTCT	997.01	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.234;DP=629;FS=0.959;HRun=0;HaplotypeScore=99.2078;InbreedingCoeff=0.9973;MQ=87.58;MQ0=1;MQRankSum=-2.043;QD=45.32;ReadPosRankSum=-0.023;VQSLOD=4.1862;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:45.11:1092,45,0	0/0:8,0:8:24.05:0,24,384	0/0:27,0:27:66.13:0,66,1127	0/0:24,0:24:51.71:0,52,953	0/0:20,0:20:57.18:0,57,1031	0/0:14,0:14:42.14:0,42,784	0/0:26,0:26:63.22:0,63,1170	0/0:36,0:36:96.30:0,96,1672	0/0:15,0:15:36.12:0,36,672	0/0:26,0:26:69.24:0,69,1281	0/0:25,0:25:72.25:0,72,1341	0/0:22,0:22:66.23:0,66,1231	0/0:19,0:19:54.19:0,54,1005	0/0:24,0:24:66.23:0,66,1224	0/0:32,0:32:69.22:0,69,1256	0/0:19,0:18:54.19:0,54,1008	0/0:23,0:23:63.20:0,63,1142	0/0:14,0:13:33.11:0,33,607	0/0:20,0:20:57.15:0,57,986	0/0:28,0:28:75.24:0,75,1347	0/0:30,0:30:72.21:0,72,1279	0/0:19,0:19:54.17:0,54,969	0/0:25,0:25:72.23:0,72,1299	0/0:23,0:23:69.22:0,69,1246	0/0:21,0:21:57.18:0,57,1032	0/0:28,0:28:84.26:0,84,1476	0/0:25,0:25:72.25:0,72,1342	0/0:14,0:14:33.11:0,33,616
chr10	93712475	.	C	CTTT	7024.42	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-4.090;DP=487;FS=0.000;HRun=14;HaplotypeScore=92.8940;InbreedingCoeff=0.6592;MQ=73.28;MQ0=4;MQRankSum=-3.048;QD=16.34;ReadPosRankSum=0.302;VQSLOD=3.7460;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:1.95:0,2,19	1/1:3,1:8:17:149,17,0	0/0:24,0:14:13.48:0,13,115	0/0:22,0:13:14.72:0,15,123	1/1:11,1:33:24.39:364,24,0	1/1:6,10:18:24.55:410,25,0	1/1:4,7:13:24.02:328,24,0	1/1:14,0:32:50.72:408,51,0	1/1:3,1:17:29.89:253,30,0	1/1:3,2:20:44.93:437,45,0	1/1:8,2:22:40.88:419,41,0	1/1:6,0:10:9.89:119,10,0	1/1:1,6:7:3.01:52,3,0	1/1:4,5:9:8.99:124,9,0	1/1:9,0:25:32.69:233,33,0	1/1:3,0:26:38.38:299,38,0	1/1:1,1:10:9.03:146,9,0	1/1:6,5:17:5.61:174,6,0	1/1:13,3:24:42.12:637,42,0	1/1:9,1:19:34.67:521,35,0	1/1:6,0:6:3.01:39,3,0	1/1:4,5:11:17.93:200,18,0	1/1:7,11:22:5.75:423,6,0	1/1:2,5:8:6:75,6,0	1/1:2,1:17:22.19:190,22,0	1/1:7,7:15:27.07:408,27,0	1/1:12,1:25:32.81:416,33,0	1/1:3,2:15:20.47:200,20,0
chr10	93712501	.	T	TGGGAAC	386.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.902;DP=444;FS=2.830;HRun=0;HaplotypeScore=125.7761;InbreedingCoeff=0.7781;MQ=89.80;MQ0=3;MQRankSum=-0.481;QD=32.17;ReadPosRankSum=-0.750;VQSLOD=3.4840;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,4:12:4.47:465,4,0	0/0:4,0:4:12.03:0,12,258	0/0:28,0:19:29.71:0,30,860	0/0:30,0:25:54.48:0,54,1162	0/0:22,0:22:63.19:0,63,1455	0/0:15,0:15:39.12:0,39,878	0/0:12,0:12:33.11:0,33,749	0/0:35,0:34:84.26:0,84,1865	0/0:20,0:20:51.04:0,51,1114	0/0:21,0:21:63.11:0,63,1358	0/0:21,0:21:54.17:0,54,1301	0/0:10,0:10:18.05:0,18,383	0/0:9,0:9:24.06:0,24,506	0/0:9,0:9:18.06:0,18,436	0/0:20,0:20:54.17:0,54,1329	0/0:18,0:18:36.12:0,36,820	0/0:9,0:9:18.06:0,18,389	0/0:12,0:12:21.03:0,21,405	0/0:16,0:16:42.13:0,42,993	0/0:11,0:11:30.10:0,30,643	0/0:10,0:10:30.08:0,30,660	0/0:9,0:9:27.05:0,27,558	0/0:19,0:19:45.15:0,45,1066	0/0:9,0:9:18.06:0,18,422	0/0:13,0:13:30.09:0,30,653	0/0:17,0:17:51.14:0,51,1100	0/0:16,0:16:39.05:0,39,720	0/0:16,0:16:42.11:0,42,905
chr10	93713641	.	ACCATCTGT	A	1038.49	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.235;DP=602;FS=0.000;HRun=0;HaplotypeScore=167.9253;InbreedingCoeff=0.9835;MQ=65.91;MQ0=7;MQRankSum=-5.994;QD=43.27;ReadPosRankSum=-0.778;VQSLOD=3.1436;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,18:24:48.16:1133,48,0	0/0:8,0:8:24.08:0,24,1021	0/0:24,0:17:15.56:0,16,1641	0/0:40,0:32:82.11:0,82,2803	0/0:29,0:29:78.27:0,78,3214	0/0:20,0:20:57.20:0,57,2368	0/0:23,0:23:63.20:0,63,2413	0/0:23,0:23:55.43:0,55,2226	0/0:20,0:20:60.21:0,60,2500	0/0:16,0:16:42.14:0,42,1747	0/0:19,0:19:54.19:0,54,2311	0/0:19,0:19:48.16:0,48,2032	0/0:14,0:14:39.13:0,39,1601	0/0:18,0:18:42.14:0,42,1733	0/0:22,0:22:63.22:0,63,2608	0/0:19,0:19:48.16:0,48,2047	0/0:25,0:25:63.22:0,63,2643	0/0:27,0:27:75.24:0,75,3078	0/0:23,0:22:66.23:0,66,2685	0/0:18,0:18:51.18:0,51,2118	0/0:29,0:29:72.23:0,72,2891	0/0:24,0:24:69.24:0,69,2725	0/0:20,0:20:48.16:0,48,2044	0/0:21,0:21:42.14:0,42,1758	0/0:16,0:16:45.15:0,45,1930	0/0:30,0:30:87.30:0,87,3671	0/0:21,0:21:57.20:0,57,2374	0/0:10,0:10:30.10:0,30,1294
chr10	93713726	.	TA	T	181.92	PASS	AB=0.917;AC=4;AF=0.071;AN=56;BaseQRankSum=6.469;DP=518;FS=0.740;HRun=11;HaplotypeScore=52.6539;InbreedingCoeff=0.4072;MQ=64.41;MQ0=2;MQRankSum=0.246;QD=5.35;ReadPosRankSum=-0.110;VQSLOD=0.9101;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,11:14:32.92:271,33,0	0/0:9,0:9:24.05:0,24,250	0/0:24,0:15:23.21:0,23,229	0/1:15,0:9:10.77:11,0,71	0/0:19,1:20:26.48:0,26,480	0/0:17,0:17:42.11:0,42,447	0/0:16,1:17:14.39:0,14,332	0/0:27,2:29:15.99:0,16,604	0/0:19,0:20:50.29:0,50,570	0/0:11,1:12:8.44:0,8,295	0/0:19,0:19:42.10:0,42,441	0/0:17,1:18:26.47:0,26,478	0/0:13,0:13:33.07:0,33,346	0/0:25,0:25:59.62:0,60,602	0/0:12,0:12:30.08:0,30,320	0/0:18,1:19:26.32:0,26,469	0/0:30,0:30:75.11:0,75,776	0/0:18,1:20:29.35:0,29,493	0/0:19,1:22:38.06:0,38,562	0/0:29,0:29:75.19:0,75,800	0/0:17,0:16:48.12:0,48,512	0/0:8,0:8:21.05:0,21,224	0/0:10,0:10:2.45:0,2,231	0/0:11,0:11:27.07:0,27,287	0/0:25,2:27:22.87:0,23,641	0/0:23,0:23:60.15:0,60,639	0/0:29,2:31:59.55:0,60,829	0/1:4,1:5:9.60:10,0,113
chr10	93713862	.	CTG	C	1401.93	PASS	AB=0.909;AC=18;AF=0.321;AN=56;BaseQRankSum=1.410;DP=557;FS=1.184;HRun=0;HaplotypeScore=84.4201;InbreedingCoeff=0.4166;MQ=66.33;MQ0=11;MQRankSum=1.900;QD=5.41;ReadPosRankSum=-1.889;VQSLOD=2.4560;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:24:7.18:32,7,0	0/1:10,0:10:23.83:24,0,247	0/0:31,0:15:1.25:0,1,3	0/0:29,0:15:6.02:0,6,88	0/1:21,2:23:3.31:3,0,352	0/0:9,0:12:6:0,6,51	0/0:10,0:10:3.47:0,3,27	1/1:25,1:28:26.69:241,27,0	0/0:14,0:14:23.67:0,24,320	0/0:18,0:18:36.09:0,36,486	0/0:23,3:26:11.80:0,12,549	0/0:12,0:12:5.97:0,6,60	0/0:5,0:12:15.01:0,15,141	0/0:10,0:18:17.98:0,18,152	0/0:18,0:18:27:0,27,358	0/0:14,0:14:4.17:0,4,255	0/0:24,0:22:26.54:0,27,335	0/1:19,0:20:37.66:42,0,38	0/1:24,2:25:9.19:249,0,9	1/1:7,15:23:29.63:255,30,0	0/1:12,13:25:21.35:149,0,21	0/0:10,0:12:6:0,6,51	0/0:11,0:22:14.59:0,15,131	0/1:12,0:20:1.03:1,0,113	0/0:25,0:24:5.75:0,6,449	1/1:14,9:24:23.82:206,24,0	1/1:12,10:22:24.06:266,24,0	1/1:8,4:12:11.70:111,12,0
chr10	93714701	.	T	TC	984.55	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.877;DP=517;FS=4.138;HRun=2;HaplotypeScore=61.6330;InbreedingCoeff=0.9769;MQ=77.70;MQ0=0;MQRankSum=-4.326;QD=29.83;ReadPosRankSum=0.679;VQSLOD=3.2074;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:75.25:1079,75,0	0/0:6,0:6:15.05:0,15,186	0/0:17,0:16:38.44:0,38,423	0/0:20,0:15:35.44:0,35,400	0/0:20,0:20:60.18:0,60,731	0/0:13,0:13:33.10:0,33,407	0/0:18,0:18:42.10:0,42,495	0/0:43,0:43:99:0,117,1439	0/0:10,0:10:30.09:0,30,372	0/0:21,0:21:60.19:0,60,744	0/0:14,0:14:39.12:0,39,483	0/0:12,0:12:30.09:0,30,372	0/0:13,0:13:30.09:0,30,371	0/0:14,0:14:33.09:0,33,409	0/0:8,0:8:21.07:0,21,260	0/0:15,0:15:33.10:0,33,409	0/0:23,0:23:66.21:0,66,817	0/0:19,0:19:42.13:0,42,520	0/0:28,0:28:81.25:0,81,1004	0/0:22,0:22:57.18:0,57,706	0/0:23,0:23:66.18:0,66,792	0/0:13,0:13:36.11:0,36,446	0/0:19,0:19:57.18:0,57,705	0/0:13,0:13:39.11:0,39,470	0/0:14,0:14:27.08:0,27,334	0/0:21,0:21:60.19:0,60,743	0/0:21,0:21:51.16:0,51,631	0/0:23,0:23:63.20:0,63,780
chr10	93716315	.	GC	G	7655.15	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-4.161;DP=520;FS=9.196;HRun=9;HaplotypeScore=87.9184;InbreedingCoeff=0.8350;MQ=75.14;MQ0=0;MQRankSum=-4.682;QD=21.09;ReadPosRankSum=6.872;VQSLOD=4.4614;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:20:26.09:0,26,156	1/1:0,4:4:12.01:110,12,0	0/0:30,0:30:51.15:0,51,584	0/0:19,0:17:4:0,4,209	1/1:1,25:26:54.03:494,54,0	0/0:5,0:10:6.25:0,6,41	0/0:11,0:20:17.79:0,18,122	1/1:8,28:36:84:757,84,0	1/1:1,20:21:45.01:412,45,0	1/1:2,21:23:63.01:571,63,0	1/1:1,16:17:41.97:372,42,0	0/0:6,0:12:8.65:0,9,49	0/0:3,0:3:5.94:0,6,41	0/0:4,0:11:1.13:0,1,22	1/1:3,24:27:54.01:494,54,0	1/1:7,26:33:72:654,72,0	1/1:2,29:31:84.04:769,84,0	1/1:2,7:9:17.95:156,18,0	1/1:3,9:12:27:247,27,0	1/1:1,19:20:24.78:460,25,0	1/1:2,22:24:63.02:577,63,0	0/0:5,0:10:6.08:0,6,39	0/0:10,0:11:2.88:0,3,15	0/0:4,0:11:5.93:0,6,40	1/1:4,20:24:36.01:330,36,0	1/1:4,26:30:77.97:704,78,0	1/1:3,18:21:48.02:439,48,0	1/1:1,4:5:12.01:110,12,0
chr10	93716368	.	GGC	G	10281.54	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=15.633;DP=503;FS=8.127;HRun=0;HaplotypeScore=122.5530;InbreedingCoeff=0.9599;MQ=99.12;MQ0=0;MQRankSum=-12.444;QD=33.27;ReadPosRankSum=0.849;VQSLOD=6.9495;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,11:13:33:373,33,0	1/1:1,6:7:18.04:213,18,0	0/0:30,0:30:66.02:0,66,1473	0/0:31,0:31:90.24:0,90,1580	1/1:2,12:14:32.95:351,33,0	1/1:2,10:12:30.05:343,30,0	1/1:0,17:17:48.08:585,48,0	1/1:3,25:28:78.24:989,78,0	1/1:2,27:29:84.23:1069,84,0	1/1:3,13:16:38.78:434,39,0	1/1:0,10:10:27.07:308,27,0	1/1:0,16:16:48.08:645,48,0	1/1:1,13:14:39.06:454,39,0	1/1:0,11:11:33.05:394,33,0	1/1:2,27:29:81.23:1004,81,0	1/1:0,26:26:78.24:1052,78,0	0/0:26,0:26:75.26:0,75,1448	1/1:1,1:2:3.01:33,3,0	0/0:13,0:13:39.10:0,39,669	0/0:23,0:23:69.22:0,69,1298	0/0:27,0:27:78.27:0,78,1506	1/1:1,9:10:29.88:382,30,0	1/1:3,12:15:39.06:468,39,0	1/1:2,13:15:33.06:406,33,0	1/1:1,20:21:60.15:685,60,0	0/0:17,0:17:48.16:0,48,915	0/0:27,0:27:75.26:0,75,1422	1/1:1,3:4:9.02:94,9,0
chr10	93716373	.	T	TC	9735.52	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=14.621;DP=521;FS=2.461;HRun=1;HaplotypeScore=119.2834;InbreedingCoeff=0.9592;MQ=100.54;MQ0=0;MQRankSum=-10.768;QD=30.33;ReadPosRankSum=1.621;VQSLOD=4.7392;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:12:30.08:370,30,0	1/1:0,9:9:18.03:200,18,0	0/0:32,0:32:90.04:0,90,1065	0/0:33,0:33:85.33:0,85,1069	1/1:1,12:13:21.03:214,21,0	1/1:1,10:11:26.98:286,27,0	1/1:2,17:19:42.15:526,42,0	1/1:2,29:31:93.27:1144,93,0	1/1:4,27:31:81.18:996,81,0	1/1:1,13:14:38.48:438,38,0	1/1:2,10:12:32.98:341,33,0	1/1:0,16:16:38.91:491,39,0	1/1:1,13:14:33.07:378,33,0	1/1:1,13:14:39.05:473,39,0	1/1:5,27:32:93.11:1076,93,0	1/1:0,25:25:69.01:795,69,0	0/0:26,0:26:78.24:0,78,996	1/1:1,1:2:3.01:32,3,0	0/0:12,0:12:36.11:0,36,453	0/0:23,0:23:66.21:0,66,845	0/0:27,0:27:78.25:0,78,1012	1/1:3,9:12:32.87:379,33,0	1/1:2,14:16:38.93:427,39,0	1/1:2,13:15:33.10:414,33,0	1/1:0,20:20:60.14:665,60,0	0/0:17,0:17:48.15:0,48,611	0/0:30,0:30:84.27:0,84,1089	1/1:0,3:3:9.02:91,9,0
chr10	93716884	.	GA	G	1310.11	PASS	AB=0.669;AC=26;AF=0.464;AN=56;BaseQRankSum=-0.121;DP=447;FS=10.152;HRun=15;HaplotypeScore=61.1422;InbreedingCoeff=0.5991;MQ=66.33;MQ0=4;MQRankSum=-0.369;QD=5.41;ReadPosRankSum=0.316;VQSLOD=1.4571;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:68.14:0,68,583	1/1:2,0:3:1.99:6,2,0	0/0:24,0:7:10.15:0,10,56	0/0:18,0:12:8.26:0,8,46	1/1:18,7:26:30.89:204,31,0	0/0:14,1:15:13.94:0,14,142	0/0:14,0:14:36.59:0,37,176	1/1:11,15:27:35.77:208,36,0	1/1:8,7:15:17.71:115,18,0	1/1:8,7:15:17.45:113,17,0	0/1:4,7:12:26.86:90,0,27	0/0:14,0:14:23.43:0,23,145	0/0:17,0:17:37.57:0,38,229	0/0:8,0:8:20.20:0,20,109	1/1:12,6:18:25.28:147,25,0	0/1:11,6:17:0.56:126,0,1	0/0:5,0:19:27.96:0,28,145	0/1:6,2:8:15.42:33,0,15	1/1:7,1:10:13.77:49,14,0	1/1:2,0:14:18.02:53,18,0	0/1:4,1:8:8.03:8,0,15	0/0:13,0:13:25.39:0,25,161	0/0:6,0:6:17.40:0,17,104	0/0:23,0:23:45.79:0,46,251	1/1:2,9:12:13.80:83,14,0	0/1:6,0:15:5.01:27,0,5	1/1:5,1:25:40.51:127,41,0	0/1:4,9:13:4.34:125,0,4
chr10	93717030	.	AAAAAAAAAAAAAG	A	308.26	PASS	AB=0.564;AC=1;AF=0.018;AN=56;BaseQRankSum=0.389;DP=388;FS=1.673;HRun=0;HaplotypeScore=144.4217;InbreedingCoeff=-0.0426;MQ=50.14;MQ0=13;MQRankSum=-1.529;QD=9.94;ReadPosRankSum=2.615;VQSLOD=1.9729;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:32.90:0,33,792	0/0:2,0:2:6:0,6,57	0/0:14,0:3:8.41:0,8,99	0/0:30,0:10:13.55:0,14,172	0/0:32,0:30:73.77:0,74,2129	0/0:12,0:11:30.09:0,30,851	0/0:6,0:6:15.05:0,15,429	0/0:29,0:27:63.01:0,63,1167	0/0:11,0:9:20.98:0,21,573	0/0:18,0:16:48.06:0,48,1051	0/0:24,0:24:53.20:0,53,1492	0/0:6,0:5:9.03:0,9,289	0/0:5,0:3:6.02:0,6,295	0/0:5,0:5:15.05:0,15,440	0/0:10,0:9:24.06:0,24,467	0/0:14,0:14:41.73:0,42,1132	0/1:7,24:30:58.22:382,0,58	0/0:10,0:9:17.97:0,18,641	0/0:17,0:15:45.14:0,45,1543	0/0:16,0:16:39.11:0,39,1212	0/0:1,0:1:3.01:0,3,34	0/0:3,0:2:6:0,6,73	0/0:4,0:3:4.26:0,4,166	0/0:3,0:3:2.90:0,3,16	0/0:19,0:17:42.12:0,42,1091	0/0:20,0:20:57.12:0,57,1525	0/0:18,0:17:42.11:0,42,1195	0/0:15,0:15:34.62:0,35,419
chr10	93717423	.	CT	C	1206.19	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.474;DP=729;FS=17.231;HRun=3;HaplotypeScore=129.9472;InbreedingCoeff=0.9511;MQ=92.23;MQ0=0;MQRankSum=-5.047;QD=29.42;ReadPosRankSum=-2.803;VQSLOD=1.3308;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:2,39:41:99:1301,105,0	0/0:12,0:12:35.54:0,36,234	0/0:44,0:44:99:0,111,1428	0/0:41,0:38:97.81:0,98,1334	0/0:27,0:27:74.12:0,74,497	0/0:27,0:27:71.15:0,71,479	0/0:30,0:30:61.78:0,62,498	0/0:28,0:28:30.79:0,31,382	0/0:21,0:21:58.30:0,58,370	0/0:32,0:32:84.79:0,85,513	0/0:20,0:20:29.52:0,30,320	0/0:26,0:26:77:0,77,528	0/0:22,0:22:65.13:0,65,428	0/0:27,0:27:79.81:0,80,523	0/0:25,0:25:73.88:0,74,477	0/0:28,0:28:80:0,80,557	0/0:26,0:26:74.56:0,75,494	0/0:11,0:11:9.73:0,10,170	0/0:21,0:21:52.79:0,53,328	0/0:22,0:22:59.27:0,59,399	0/0:34,0:34:97.71:0,98,648	0/0:20,0:20:56.78:0,57,383	0/0:20,0:20:54.29:0,54,361	0/0:26,0:26:67.05:0,67,466	0/0:29,0:29:57.03:0,57,487	0/0:26,0:26:68.49:0,68,420	0/0:28,0:28:33.36:0,33,432	0/0:15,0:15:44.55:0,45,308
chr10	93718669	.	T	TA	2917.73	PASS	AB=0.684;AC=25;AF=0.833;AN=30;BaseQRankSum=-3.893;DP=245;FS=2.849;HRun=13;HaplotypeScore=52.9887;InbreedingCoeff=0.2764;MQ=55.74;MQ0=2;MQRankSum=-0.674;QD=13.14;ReadPosRankSum=1.417;VQSLOD=4.0388;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/1:2,6:8:8.57:72,0,9	1/1:9,0:3:2.94:18,3,0	0/1:10,0:5:7.53:8,0,14	1/1:3,10:13:24.03:223,24,0	./.	./.	1/1:7,19:26:27.64:499,28,0	1/1:4,7:12:17.86:154,18,0	1/1:12,4:17:14.23:152,14,0	1/1:5,11:18:29.71:252,30,0	./.	./.	./.	0/1:4,14:18:29.39:165,0,29	1/1:4,13:19:24.26:347,24,0	0/0:21,0:20:58.49:0,58,391	1/1:6,22:29:24.40:356,24,0	./.	./.	./.	./.	./.	./.	1/1:0,18:19:44.84:396,45,0	1/1:0,2:2:6.01:56,6,0	./.	1/1:8,12:20:36.04:334,36,0
chr10	93718706	.	A	AAT	820.67	PASS	AC=2;AF=0.067;AN=30;BaseQRankSum=-4.744;DP=282;FS=4.802;HRun=0;HaplotypeScore=87.1348;InbreedingCoeff=0.7867;MQ=72.30;MQ0=2;MQRankSum=1.279;QD=31.56;ReadPosRankSum=3.980;VQSLOD=5.4407;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:8,0:8:17.78:0,18,189	0/0:21,0:14:38.27:0,38,351	0/0:12,0:7:4.35:0,4,65	0/0:28,0:27:67.85:0,68,746	./.	./.	0/0:32,0:31:77.94:0,78,911	0/0:16,0:16:42.05:0,42,499	0/0:17,0:17:41.99:0,42,499	0/0:18,0:18:46.04:0,46,434	./.	./.	./.	0/0:20,0:20:49.37:0,49,613	0/0:16,0:16:45.01:0,45,506	1/1:0,26:26:57.19:910,57,0	0/0:31,0:31:61.83:0,62,738	./.	./.	./.	./.	./.	./.	0/0:16,0:16:32.87:0,33,379	0/0:2,0:2:6:0,6,53	./.	0/0:19,0:19:52.01:0,52,639
chr10	93720907	.	GAGAAAGAA	G	256.26	PASS	AC=20;AF=0.455;AN=44;BaseQRankSum=-1.331;DP=114;FS=0.000;HRun=0;HaplotypeScore=25.7767;InbreedingCoeff=0.6644;MQ=26.61;MQ0=8;MQRankSum=0.502;QD=5.34;ReadPosRankSum=-0.315;VQSLOD=0.9139;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:17.65:0,18,109	0/0:6,0:6:17.73:0,18,114	0/0:6,0:1:2.94:0,3,18	./.	0/0:7,0:7:16.66:0,17,100	1/1:1,0:1:2.97:20,3,0	1/1:6,0:5:8.77:54,9,0	1/1:1,7:4:8.82:56,9,0	0/0:5,0:5:12.76:0,13,69	0/0:7,0:7:20.49:0,20,131	0/0:5,0:5:14.75:0,15,96	1/1:4,0:3:0.89:2,1,0	1/1:6,0:1:2.97:20,3,0	1/1:7,0:4:5.93:40,6,0	0/0:3,0:3:8.85:0,9,56	0/0:5,0:4:11.64:0,12,68	0/0:3,0:3:2.97:0,3,20	0/0:1,0:1:2.98:0,3,21	./.	./.	./.	1/1:5,0:5:8.23:56,8,0	1/1:3,0:3:2.96:19,3,0	1/1:2,0:2:2.97:20,3,0	0/0:6,0:5:14.72:0,15,91	./.	./.	1/1:6,0:6:17.85:126,18,0
chr10	93720934	.	AAAGG	A	33.10	PASS	AB=0.889;AC=5;AF=0.114;AN=44;BaseQRankSum=2.682;DP=129;FS=0.000;HRun=0;HaplotypeScore=19.6189;InbreedingCoeff=0.2215;MQ=25.02;MQ0=26;MQRankSum=0.963;QD=1.50;ReadPosRankSum=-0.874;VQSLOD=0.7635;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:5:0.47:1,0,0	0/0:4,0:4:12.04:0,12,216	0/0:6,0:1:3.01:0,3,50	./.	0/0:7,0:7:18.03:0,18,291	0/0:1,0:1:2.98:0,3,21	0/0:6,0:4:5.97:0,6,56	0/0:10,0:4:6.01:0,6,66	0/0:5,0:5:15:0,15,197	0/0:8,0:8:18.02:0,18,289	0/0:5,0:5:11.64:0,12,179	0/0:5,0:3:1.25:0,1,3	./.	0/1:7,1:5:21.80:22,0,32	0/0:3,0:2:6.02:0,6,108	0/0:6,0:4:12.04:0,12,215	1/1:2,3:5:5.09:99,5,0	0/0:2,0:1:3.01:0,3,54	./.	./.	0/0:2,0:1:2.98:0,3,22	0/0:3,0:3:8.93:0,9,75	0/0:3,0:3:2.96:0,3,19	0/0:2,0:2:3.01:0,3,38	0/0:7,0:5:15.05:0,15,269	./.	./.	0/0:5,0:4:12.04:0,12,216
chr10	93720945	.	GGA	G	303.09	PASS	AB=0.742;AC=6;AF=0.158;AN=38;BaseQRankSum=3.933;DP=139;FS=4.777;HRun=0;HaplotypeScore=22.8945;InbreedingCoeff=-0.1890;MQ=26.11;MQ0=28;MQRankSum=1.182;QD=6.74;ReadPosRankSum=-1.713;VQSLOD=1.7064;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:4:12.04:0,12,243	0/0:4,0:1:3.01:0,3,31	./.	0/1:7,3:9:26.40:26,0,303	0/0:1,0:1:3:0,3,25	0/0:7,0:5:8.04:0,8,67	0/0:12,0:2:1.55:0,2,4	0/1:3,3:6:39.10:39,0,87	0/1:5,3:8:99:117,0,278	0/1:4,1:5:35.11:35,0,170	./.	./.	0/0:8,0:5:0.20:0,0,2	0/1:3,4:6:99:116,0,106	0/0:7,0:5:12.04:0,12,235	0/0:5,0:5:7.75:0,8,44	0/0:2,0:1:3.01:0,3,61	./.	./.	0/0:2,0:1:3.01:0,3,61	0/0:3,0:3:6.49:0,6,98	0/0:3,0:3:0.89:0,1,2	./.	0/1:7,2:7:74.36:74,0,282	./.	./.	0/0:10,0:9:27.09:0,27,535
chr10	93720953	.	GGA	G	230.69	PASS	AB=0.600;AC=7;AF=0.194;AN=36;BaseQRankSum=4.692;DP=149;FS=0.000;HRun=0;HaplotypeScore=36.1723;InbreedingCoeff=0.4922;MQ=29.21;MQ0=30;MQRankSum=-1.611;QD=11.53;ReadPosRankSum=-0.860;VQSLOD=2.9646;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:5:15.01:0,15,236	./.	./.	0/0:8,0:7:12.03:0,12,207	0/0:1,0:1:0.89:0,1,2	0/0:6,0:4:3.48:0,3,34	./.	0/0:4,0:4:6.01:0,6,88	0/0:8,0:8:23.79:0,24,334	0/0:8,0:7:15.02:0,15,179	./.	./.	1/1:6,3:6:6.87:112,7,0	0/0:11,0:10:24.84:0,25,260	0/0:8,0:6:14.96:0,15,231	0/0:6,0:6:8.82:0,9,112	0/0:2,0:1:3.01:0,3,39	./.	./.	0/0:2,0:1:3.01:0,3,61	0/1:1,2:3:49.67:59,0,50	1/1:3,2:5:6.02:91,6,0	1/1:1,2:3:6.02:82,6,0	0/0:10,0:8:23.98:0,24,348	./.	./.	0/0:13,0:13:39.13:0,39,787
chr10	93720961	.	GGA	G	505.21	PASS	AB=0.819;AC=12;AF=0.316;AN=38;BaseQRankSum=3.203;DP=176;FS=6.888;HRun=0;HaplotypeScore=49.8680;InbreedingCoeff=0.4322;MQ=33.40;MQ0=29;MQRankSum=-4.027;QD=10.10;ReadPosRankSum=3.783;VQSLOD=1.8077;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:5:15.05:0,15,303	./.	./.	0/0:8,0:7:15.05:0,15,300	1/1:0,1:1:3.01:48,3,0	0/1:7,1:6:32.74:39,0,33	./.	0/0:5,0:5:9.03:0,9,153	0/0:11,0:11:33.07:0,33,563	0/0:9,0:7:15.05:0,15,295	./.	1/1:7,2:3:4.28:91,4,0	1/1:11,1:9:5.28:130,5,0	0/0:13,0:12:33.11:0,33,628	0/0:9,0:7:18.06:0,18,323	0/0:5,0:5:12.03:0,12,207	0/0:3,0:2:6:0,6,85	./.	./.	0/0:2,0:1:3.01:0,3,61	0/1:6,3:9:51.25:190,0,51	1/1:7,0:7:2.13:72,2,0	1/1:4,0:4:0.89:62,1,0	0/0:14,0:12:36.09:0,36,658	./.	./.	0/0:15,0:15:45.15:0,45,911
chr10	93720985	.	GGA	G	172.67	PASS	AC=2;AF=0.042;AN=48;BaseQRankSum=-0.249;DP=232;FS=2.217;HRun=0;HaplotypeScore=62.5588;InbreedingCoeff=0.4276;MQ=36.83;MQ0=27;MQRankSum=-2.737;QD=17.27;ReadPosRankSum=-0.258;VQSLOD=3.4502;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,6:6:18.06:261,18,0	0/0:7,0:6:15.05:0,15,304	0/0:5,0:2:3.01:0,3,44	0/0:6,0:2:6.02:0,6,102	0/0:5,0:4:6.02:0,6,119	0/0:1,0:1:3.01:0,3,58	0/0:9,0:8:12.60:0,13,147	0/0:14,0:7:15.05:0,15,280	0/0:6,0:6:12.04:0,12,242	0/0:10,0:10:30.06:0,30,557	0/0:7,0:5:12.04:0,12,238	0/0:10,0:8:3.01:0,3,38	0/0:12,0:6:18.03:0,18,261	0/0:15,0:12:29.96:0,30,292	0/0:16,0:15:42.14:0,42,837	0/0:17,0:15:42.07:0,42,748	0/0:7,0:7:15.05:0,15,196	0/0:9,0:8:24.08:0,24,467	./.	./.	0/0:2,0:1:3.01:0,3,61	0/0:9,0:9:27.01:0,27,327	0/0:9,0:9:18.05:0,18,161	0/0:7,0:7:8.97:0,9,71	0/0:17,0:15:39.13:0,39,786	./.	./.	0/0:15,0:15:45.15:0,45,910
chr10	93720990	.	AAAGG	A	1603.28	PASS	AC=16;AF=0.333;AN=48;BaseQRankSum=4.062;DP=260;FS=30.230;HRun=0;HaplotypeScore=70.9025;InbreedingCoeff=0.7848;MQ=40.87;MQ0=25;MQRankSum=-6.297;QD=17.62;ReadPosRankSum=-0.541;VQSLOD=1.5058;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:10:7.48:40,7,0	0/0:7,0:6:15.05:0,15,284	0/0:9,0:4:6.02:0,6,101	0/0:9,0:4:12.01:0,12,191	0/0:6,0:5:9.03:0,9,145	0/0:2,0:2:2.04:0,2,6	1/1:3,10:12:19.51:278,20,0	0/0:15,0:9:20.99:0,21,267	0/0:7,0:7:15.05:0,15,275	0/0:12,0:12:36.12:0,36,649	0/0:6,0:5:12.04:0,12,195	1/1:10,0:8:3.01:54,3,0	1/1:10,3:7:3.55:170,4,0	1/1:7,8:12:26.70:477,27,0	0/0:19,0:18:51.17:0,51,868	0/0:18,0:16:45.15:0,45,768	0/0:8,0:8:5.61:0,6,122	0/0:9,0:8:24.08:0,24,454	./.	./.	0/0:2,0:1:2.98:0,3,22	1/1:5,5:10:14.22:255,14,0	1/1:0,9:9:21.02:337,21,0	1/1:0,7:7:9.03:166,9,0	0/0:17,0:15:39.13:0,39,728	./.	./.	0/0:16,0:16:39.09:0,39,678
chr10	93721010	.	GAAGGAAGA	G	1055.38	PASS	AC=4;AF=0.083;AN=48;BaseQRankSum=-2.181;DP=338;FS=13.751;HRun=0;HaplotypeScore=135.2688;InbreedingCoeff=0.8141;MQ=54.08;MQ0=17;MQRankSum=1.345;QD=37.69;ReadPosRankSum=-0.201;VQSLOD=2.5871;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:13:36.10:0,36,438	0/0:7,0:6:15.05:0,15,237	0/0:24,0:15:36.20:0,36,904	0/0:22,0:10:27.02:0,27,722	0/0:10,0:10:21.01:0,21,352	0/0:5,0:5:11.95:0,12,109	0/0:16,0:16:30.03:0,30,337	1/1:0,14:14:42.12:561,42,0	0/0:13,0:13:33.07:0,33,548	0/0:17,0:17:51.17:0,51,940	0/0:13,0:12:30.10:0,30,461	0/0:13,0:11:3.01:0,3,43	0/0:18,0:14:39.99:0,40,496	0/0:18,0:16:38.43:0,38,406	0/0:23,0:22:60.20:0,60,952	0/0:21,0:20:57.19:0,57,975	0/0:8,0:8:17.99:0,18,244	0/0:13,0:12:36.12:0,36,606	./.	./.	0/0:1,0:1:0:0,0,0	0/0:10,0:10:27.90:0,28,269	0/0:13,0:13:31.29:0,31,314	0/0:7,0:7:9.02:0,9,97	0/0:19,0:18:48.16:0,48,755	./.	./.	1/1:14,0:14:36.33:612,36,0
chr10	93721025	.	G	GAAAA	3932.65	PASS	AC=16;AF=0.333;AN=48;BaseQRankSum=3.335;DP=397;FS=12.147;HRun=3;HaplotypeScore=123.5107;InbreedingCoeff=0.9254;MQ=56.98;MQ0=9;MQRankSum=-4.513;QD=32.77;ReadPosRankSum=-1.448;VQSLOD=-0.1637;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:30.84:0,31,212	0/0:7,0:6:15.05:0,15,294	0/0:32,0:22:47.06:0,47,750	0/0:26,0:12:33.11:0,33,559	0/0:10,0:11:23.99:0,24,336	1/1:6,0:6:11.95:133,12,0	1/1:20,0:20:45.02:698,45,0	0/0:18,0:18:38.08:0,38,302	0/0:16,0:16:41.95:0,42,657	0/0:21,0:21:63.17:0,63,1065	0/0:14,0:13:32.97:0,33,467	1/1:0,13:14:3.01:80,3,0	1/1:21,0:18:49.93:608,50,0	1/1:19,0:18:50.96:910,51,0	0/0:26,0:26:72.06:0,72,1204	0/0:23,0:22:63.09:0,63,1143	0/0:13,0:13:32.97:0,33,478	0/0:15,0:15:45.13:0,45,796	./.	./.	./.	1/1:12,0:12:31.74:451,32,0	1/1:16,0:16:45.02:750,45,0	1/1:9,0:9:15.04:302,15,0	0/0:21,0:21:57.11:0,57,961	0/0:1,0:1:3:0,3,25	./.	0/0:14,0:14:40.02:0,40,671
chr10	93721124	.	GCT	G	8116.61	PASS	AC=20;AF=0.417;AN=48;BaseQRankSum=2.790;DP=484;FS=2.538;HRun=0;HaplotypeScore=111.9103;InbreedingCoeff=0.9709;MQ=78.98;MQ0=0;MQRankSum=-3.223;QD=39.02;ReadPosRankSum=2.412;VQSLOD=6.9305;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,2126	0/0:11,0:11:30.10:0,30,554	0/0:19,0:19:51.12:0,51,913	0/0:22,0:22:60.20:0,60,1053	0/0:21,0:21:48.16:0,48,890	1/1:0,13:13:30.10:442,30,0	1/1:0,30:30:84.28:1236,84,0	1/1:0,21:21:60.19:864,60,0	0/0:17,0:17:51.17:0,51,954	0/0:17,0:17:51.17:0,51,925	0/0:17,0:17:48.16:0,48,897	1/1:0,28:28:72.20:1036,72,0	1/1:0,21:21:63.21:927,63,0	1/1:0,34:34:96.32:1412,96,0	0/0:35,0:35:99:0,102,1902	0/0:17,0:17:51.17:0,51,947	0/0:28,0:28:81.28:0,81,1517	0/0:11,0:11:33.11:0,33,617	./.	./.	./.	1/1:1,12:13:36.12:522,36,0	1/1:0,14:14:30.10:441,30,0	1/1:0,24:24:60.10:883,60,0	0/0:18,0:18:54.19:0,54,998	0/0:1,0:1:3.01:0,3,51	./.	1/1:0,10:10:24.08:353,24,0
chr10	93721386	.	AGCC	A	6539.77	PASS	AB=1.000;AC=23;AF=0.479;AN=48;BaseQRankSum=-9.208;DP=385;FS=9.030;HRun=0;HaplotypeScore=116.0783;InbreedingCoeff=0.8352;MQ=63.77;MQ0=7;MQRankSum=-2.602;QD=30.14;ReadPosRankSum=4.218;VQSLOD=5.0418;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:21.23:361,0,21	1/1:2,8:10:18.02:248,18,0	0/0:10,0:8:21.04:0,21,426	0/0:14,0:15:13.57:0,14,818	1/1:0,27:27:57.15:842,57,0	0/0:1,0:14:22.44:0,22,65	0/0:7,0:20:38.57:0,39,180	1/1:3,13:15:30.10:443,30,0	1/1:1,13:14:33.11:502,33,0	1/1:3,21:22:54.18:812,54,0	1/1:0,18:17:42.14:639,42,0	0/0:1,0:17:31.68:0,32,113	0/0:2,0:13:22.67:0,23,132	0/0:3,0:13:3.46:0,3,51	1/1:2,26:28:72.24:1096,72,0	1/1:1,16:17:30.10:456,30,0	0/0:27,0:27:81.25:0,81,1892	1/1:1,17:18:42.14:639,42,0	./.	./.	0/0:1,0:1:2.96:0,3,19	0/0:0,0:9:20.80:0,21,73	0/0:1,0:10:14.20:0,14,52	0/0:2,0:12:18.72:0,19,52	1/1:2,12:14:27.09:411,27,0	./.	./.	1/1:0,2:2:6.02:91,6,0
chr10	93721387	.	GCCC	G	7052.18	PASS	AC=24;AF=0.500;AN=48;BaseQRankSum=-9.949;DP=386;FS=3.823;HRun=7;HaplotypeScore=114.5065;InbreedingCoeff=0.9402;MQ=63.76;MQ0=7;MQRankSum=-2.501;QD=32.50;ReadPosRankSum=3.522;VQSLOD=3.0978;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:29:57.19:874,57,0	1/1:10,0:10:18.02:248,18,0	0/0:10,0:8:21.07:0,21,434	0/0:17,0:15:7.71:0,8,770	1/1:27,0:27:57.15:841,57,0	0/0:14,0:14:35.86:0,36,277	0/0:21,0:20:50.86:0,51,435	1/1:16,0:15:30.09:443,30,0	1/1:14,0:14:33.11:502,33,0	1/1:24,0:22:54.18:812,54,0	1/1:18,0:17:42.14:639,42,0	0/0:17,0:17:44.79:0,45,340	0/0:14,0:14:35.92:0,36,327	0/0:12,0:13:24.80:0,25,188	1/1:28,0:28:72.24:1095,72,0	1/1:17,0:17:30.10:456,30,0	0/0:27,0:27:75.26:0,75,1674	1/1:18,0:18:42.14:639,42,0	./.	./.	0/0:1,0:1:2.98:0,3,21	0/0:9,0:9:26.90:0,27,210	0/0:10,0:10:23.87:0,24,180	0/0:12,0:12:29.89:0,30,232	1/1:14,0:14:27.08:411,27,0	./.	./.	1/1:2,0:2:6.02:91,6,0
chr10	93721774	.	T	TA	3599.94	PASS	AB=0.784;AC=30;AF=0.536;AN=56;BaseQRankSum=-9.543;DP=333;FS=4.049;HRun=11;HaplotypeScore=56.4353;InbreedingCoeff=0.6482;MQ=60.15;MQ0=1;MQRankSum=3.822;QD=19.05;ReadPosRankSum=2.032;VQSLOD=4.9106;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:4.95:0,5,13	1/1:0,7:7:18:171,18,0	0/0:8,0:5:2.97:0,3,23	0/0:11,0:7:17.11:0,17,105	1/1:11,19:30:10.64:468,11,0	0/0:12,0:12:7.47:0,7,20	0/0:9,0:9:4.20:0,4,11	0/0:23,0:23:34.87:0,35,260	1/1:4,8:12:10.06:273,10,0	1/1:2,10:12:27.52:269,28,0	1/1:3,7:10:18:172,18,0	0/0:15,0:15:10.14:0,10,27	0/1:7,0:7:3.09:5,0,3	0/0:7,0:7:4.03:0,4,10	1/1:4,8:12:7.15:250,7,0	1/1:0,10:10:27.05:274,27,0	0/0:26,0:27:67.74:0,68,517	0/1:3,8:11:16.42:213,0,16	1/1:3,7:10:24.05:243,24,0	1/1:0,7:6:15.03:152,15,0	1/1:2,5:7:15.03:152,15,0	0/1:2,0:2:0.15:1,0,0	1/1:4,0:4:8.59:63,9,0	0/0:7,0:7:4.60:0,5,12	0/1:2,8:10:5.20:134,0,5	1/1:6,14:20:39.05:388,39,0	1/1:4,14:18:18.85:371,19,0	0/0:7,0:8:19.93:0,20,141
chr10	93721783	.	AAAGAAAG	A	1775.35	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=3.810;DP=357;FS=6.058;HRun=0;HaplotypeScore=93.6463;InbreedingCoeff=0.5393;MQ=59.49;MQ0=3;MQRankSum=-6.410;QD=12.33;ReadPosRankSum=-0.652;VQSLOD=1.6140;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,1:17:18.06:239,18,0	0/1:9,0:9:5.09:5,0,424	0/0:13,0:4:3.87:0,4,25	0/0:18,0:9:26.16:0,26,283	0/0:25,0:25:28.55:0,29,1917	1/1:11,0:11:18.06:239,18,0	1/1:8,0:8:12.04:159,12,0	0/0:22,0:20:54.11:0,54,1292	0/1:13,0:13:75.69:76,0,752	0/0:15,0:15:9.24:0,9,944	0/1:9,0:9:22.78:23,0,595	1/1:17,0:17:29.97:378,30,0	1/1:7,0:7:15.04:177,15,0	1/1:8,0:8:12.04:159,12,0	0/0:12,0:12:9.47:0,9,856	0/1:13,0:13:24.53:25,0,845	0/0:30,0:30:87.24:0,87,2790	0/0:15,0:15:42.13:0,42,1052	0/1:9,0:9:3.63:4,0,415	0/1:7,0:6:15.27:15,0,356	0/0:7,0:7:18.05:0,18,447	1/1:1,3:4:11.95:152,12,0	1/1:4,1:5:14.70:171,15,0	1/1:7,0:7:11.98:158,12,0	0/0:11,0:11:24.08:0,24,730	0/0:21,0:21:20.83:0,21,1394	0/0:16,0:16:41.34:0,41,1138	0/0:8,0:7:21.07:0,21,721
chr10	93721784	.	AAGAAAG	A	2658.05	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=-0.572;DP=354;FS=4.987;HRun=0;HaplotypeScore=84.3243;InbreedingCoeff=0.8074;MQ=59.55;MQ0=3;MQRankSum=-6.195;QD=25.08;ReadPosRankSum=-0.813;VQSLOD=2.9426;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:18.06:355,18,0	0/0:10,0:10:18.91:0,19,468	0/0:12,0:3:3.89:0,4,31	0/0:18,0:9:17.36:0,17,234	0/0:24,0:24:50.24:0,50,1745	1/1:0,11:11:18.06:414,18,0	1/1:0,8:8:12.04:276,12,0	0/0:21,0:19:54.14:0,54,1186	0/1:13,0:13:11.96:12,0,666	0/0:15,0:15:30.52:0,31,888	0/1:9,0:9:1.57:2,0,540	1/1:2,15:17:30.06:641,30,0	1/1:5,2:7:15.05:308,15,0	1/1:2,6:8:12.04:246,12,0	0/0:13,0:13:17.77:0,18,842	0/0:13,0:13:17.98:0,18,760	0/0:30,0:30:87.26:0,87,2511	0/0:15,0:15:45.12:0,45,1002	0/0:9,0:9:15.96:0,16,448	0/0:7,0:6:5.98:0,6,316	0/0:7,0:7:18.06:0,18,421	1/1:3,1:4:11.95:159,12,0	1/1:4,1:5:15.02:176,15,0	1/1:1,5:7:11.98:275,12,0	0/0:11,0:11:24.08:0,24,644	0/0:19,0:19:42.09:0,42,1297	0/0:16,0:16:42.13:0,42,1063	0/0:8,0:7:21.07:0,21,653
chr10	93721785	.	AG	A	542.87	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=7.514;DP=348;FS=9.258;HRun=1;HaplotypeScore=62.6957;InbreedingCoeff=0.7768;MQ=59.59;MQ0=3;MQRankSum=-7.499;QD=5.84;ReadPosRankSum=-1.369;VQSLOD=-0.6423;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:17.43:101,17,0	0/0:10,0:10:22.06:0,22,154	0/1:11,0:3:10.20:10,0,27	0/0:18,1:10:17.46:0,17,149	0/0:24,0:24:61.56:0,62,441	1/1:11,0:11:17.25:93,17,0	1/1:8,0:8:11.50:61,12,0	0/0:20,0:18:51.46:0,51,512	0/0:12,0:13:1.04:0,1,136	0/0:14,0:14:33.35:0,33,239	0/0:9,0:9:2.67:0,3,113	1/1:15,1:16:25.90:139,26,0	1/1:2,2:7:14.59:88,15,0	1/1:6,2:8:11.62:66,12,0	0/0:13,0:13:2.63:0,3,173	0/0:12,0:12:24.85:0,25,173	0/0:30,0:30:83.93:0,84,962	0/0:15,0:15:32.07:0,32,275	0/0:10,0:10:8.36:0,8,114	0/0:7,0:6:10.17:0,10,64	0/0:6,0:6:17.59:0,18,109	1/1:4,0:4:5.70:29,6,0	1/1:5,0:5:13.72:93,14,0	1/1:6,0:6:11.45:62,11,0	0/0:11,0:11:23.63:0,24,173	0/0:18,0:18:45.57:0,46,317	0/0:16,0:16:39.69:0,40,259	0/0:8,0:7:18.06:0,18,227
chr10	93721789	.	AGAAAG	A	446.17	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=9.809;DP=363;FS=10.141;HRun=0;HaplotypeScore=88.4573;InbreedingCoeff=0.7360;MQ=60.71;MQ0=3;MQRankSum=-8.708;QD=4.65;ReadPosRankSum=2.681;VQSLOD=0.6959;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:12.72:48,13,0	0/0:10,0:10:30.10:0,30,746	0/0:14,0:5:4.27:0,4,65	0/0:19,0:10:20.73:0,21,257	0/0:25,0:25:65.05:0,65,2072	1/1:11,0:11:15.91:64,16,0	1/1:8,0:8:11.14:58,11,0	0/0:25,0:23:69.21:0,69,1536	0/0:12,0:12:36.09:0,36,890	0/0:14,0:14:39.59:0,40,1089	0/0:9,0:9:27.02:0,27,712	1/1:15,1:16:10.67:137,11,0	1/1:5,2:7:14.75:142,15,0	1/1:6,2:8:11.23:85,11,0	0/1:14,0:14:1.29:1,0,1020	0/0:12,0:12:36.10:0,36,976	0/0:32,0:32:96.29:0,96,2643	0/0:15,0:15:45.15:0,45,1192	0/0:11,0:11:30.57:0,31,722	0/0:8,0:7:21.06:0,21,500	0/0:7,0:7:21.07:0,21,572	0/1:4,0:4:14.52:15,0,23	0/1:5,0:5:7.24:33,0,7	1/1:6,0:6:11.07:53,11,0	0/0:11,0:11:24.08:0,24,744	0/0:17,0:17:51.17:0,51,1532	0/0:17,0:17:51.17:0,51,1423	0/0:9,0:8:24.08:0,24,702
chr10	93722109	.	CT	C	4034.38	PASS	AB=0.974;AC=50;AF=0.893;AN=56;BaseQRankSum=2.070;DP=634;FS=1.340;HRun=3;HaplotypeScore=242.7683;InbreedingCoeff=0.2272;MQ=67.57;MQ0=0;MQRankSum=4.436;QD=6.56;ReadPosRankSum=1.966;VQSLOD=0.4710;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:16.46:159,16,0	1/1:15,0:15:24.94:114,25,0	0/1:15,2:17:19.64:20,0,334	0/0:18,1:19:11.72:0,12,356	0/1:31,0:31:29.07:59,0,29	1/1:23,1:24:41.68:184,42,0	1/1:22,0:22:39.11:171,39,0	1/1:38,1:39:80.94:430,81,0	1/1:18,0:18:26.07:118,26,0	1/1:23,1:24:11.04:223,11,0	1/1:18,2:20:17.66:172,18,0	0/1:24,0:24:13.06:115,0,13	1/1:15,0:15:24.25:84,24,0	1/1:19,0:19:23.10:116,23,0	1/1:43,0:43:55.78:268,56,0	1/1:28,0:28:59.12:241,59,0	1/1:27,0:27:48.21:170,48,0	1/1:15,0:15:26.47:106,26,0	1/1:13,0:13:27.99:110,28,0	1/1:24,0:23:16.31:116,16,0	1/1:25,0:25:42.71:170,43,0	1/1:22,1:23:29.87:178,30,0	0/1:12,0:12:9.65:65,0,10	1/1:21,0:21:30.72:115,31,0	1/1:13,0:13:9.09:72,9,0	1/1:27,0:27:54.60:272,55,0	1/1:28,0:28:32.83:140,33,0	1/1:11,0:11:16.14:46,16,0
chr10	93722969	.	T	TCTA	8159.57	PASS	AB=0.533;AC=9;AF=0.161;AN=56;BaseQRankSum=-13.551;DP=702;FS=0.358;HRun=0;HaplotypeScore=91.3771;InbreedingCoeff=0.8828;MQ=84.78;MQ0=0;MQRankSum=-2.808;QD=55.13;ReadPosRankSum=2.601;VQSLOD=6.6683;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.22:0,84,1285	0/0:11,0:11:33.11:0,33,530	0/0:29,0:30:60.62:0,61,1148	0/0:22,0:22:51.17:0,51,805	0/0:32,0:32:93.30:0,93,1471	0/0:29,0:29:84.29:0,84,1343	0/0:19,0:19:54.18:0,54,868	0/0:33,0:33:87.30:0,87,1398	0/0:19,0:19:57.19:0,57,916	0/0:22,0:22:66.22:0,66,1040	0/0:22,0:22:57.19:0,57,916	0/0:28,0:28:81.28:0,81,1298	0/0:19,0:19:51.17:0,51,820	0/0:24,0:24:66.21:0,66,1032	0/0:29,0:29:81.25:0,81,1248	0/0:35,0:35:99:0,99,1541	0/0:21,0:21:63.21:0,63,1001	0/0:13,0:13:30.10:0,30,482	1/1:3,22:27:72.23:1516,72,0	1/1:3,26:30:81.28:1773,81,0	1/1:1,21:22:51.18:1125,51,0	0/0:34,0:34:96.33:0,96,1540	0/0:29,0:29:87.30:0,87,1390	0/0:24,0:24:69.24:0,69,1109	0/0:18,0:18:54.18:0,54,868	0/1:4,27:32:9.15:1701,0,9	1/1:2,34:36:93.32:2044,93,0	0/0:10,0:10:30.10:0,30,472
chr10	93723160	.	C	CTA	27897.88	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.853;DP=672;FS=1.363;HRun=0;HaplotypeScore=65.4776;InbreedingCoeff=0.9952;MQ=82.14;MQ0=4;MQRankSum=-10.008;QD=44.35;ReadPosRankSum=6.631;VQSLOD=6.4963;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:63.21:1130,63,0	1/1:0,13:13:27.09:495,27,0	0/0:19,0:19:54.07:0,54,713	0/0:24,0:24:47.19:0,47,710	1/1:0,27:26:66.22:1189,66,0	1/1:2,26:28:69.24:1265,69,0	1/1:4,9:13:21.07:385,21,0	1/1:4,26:30:78.25:1383,78,0	1/1:1,27:30:66.23:1208,66,0	1/1:3,26:29:78.25:1386,78,0	1/1:0,15:15:36.12:639,36,0	1/1:0,33:34:87.30:1582,87,0	1/1:0,21:21:48.05:879,48,0	1/1:1,16:17:45.14:824,45,0	1/1:1,20:22:57.20:1045,57,0	1/1:2,35:37:99:1815,99,0	1/1:1,17:19:36.12:660,36,0	1/1:1,24:23:63.22:1154,63,0	1/1:0,20:20:59.56:1004,60,0	1/1:3,24:27:54.19:984,54,0	1/1:1,25:28:69.24:1265,69,0	1/1:0,25:23:63.22:1154,63,0	1/1:1,20:22:48.16:878,48,0	1/1:1,19:20:48.16:880,48,0	1/1:3,16:19:45.15:825,45,0	1/1:1,34:36:99:1781,102,0	1/1:2,34:36:93.32:1704,93,0	1/1:1,9:10:21.07:384,21,0
chr10	93723566	.	G	GA	3217.88	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=9.626;DP=568;FS=21.860;HRun=8;HaplotypeScore=119.9877;InbreedingCoeff=0.9281;MQ=48.75;MQ0=19;MQRankSum=-11.303;QD=18.18;ReadPosRankSum=-0.408;VQSLOD=2.1960;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,12:31:49.06:463,49,0	0/0:11,0:10:20.98:0,21,185	0/0:18,0:3:4.53:0,5,15	0/0:22,0:3:5.37:0,5,33	0/0:20,0:20:39.01:0,39,368	1/1:4,9:13:33:339,33,0	1/1:9,16:24:42.47:422,42,0	0/0:28,0:28:46.61:0,47,427	0/0:18,0:17:33.01:0,33,302	0/0:15,0:15:26.98:0,27,242	0/0:25,0:24:38.98:0,39,362	1/1:4,9:13:20.69:191,21,0	1/1:8,7:14:26.96:266,27,0	1/1:10,17:27:56.32:538,56,0	0/0:25,0:25:39:0,39,357	0/0:29,0:29:38.39:0,38,451	0/0:25,0:26:54.27:0,54,475	0/0:9,0:9:6:0,6,55	0/0:15,0:15:16.32:0,16,108	0/0:28,0:28:34.89:0,35,314	0/0:9,0:9:6.92:0,7,50	1/1:7,11:18:42.10:456,42,0	1/1:9,14:23:48.73:484,49,0	1/1:3,8:11:26.90:270,27,0	0/0:22,0:22:44.98:0,45,402	0/0:28,0:27:25.91:0,26,240	0/0:24,0:24:41.10:0,41,254	0/0:17,0:16:45.01:0,45,407
chr10	93723575	.	G	GA	4410.29	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=3.938;DP=574;FS=10.800;HRun=9;HaplotypeScore=119.2248;InbreedingCoeff=0.9258;MQ=48.79;MQ0=15;MQRankSum=-7.772;QD=16.04;ReadPosRankSum=1.032;VQSLOD=3.7866;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:6.96:128,7,0	0/0:13,0:12:20.83:0,21,178	0/0:23,0:4:8.50:0,8,52	0/0:22,0:5:5.80:0,6,51	0/0:24,0:24:46.94:0,47,415	1/1:4,10:13:32.94:280,33,0	1/1:4,18:21:43.97:342,44,0	0/0:31,0:30:44.28:0,44,415	0/0:18,0:16:23.89:0,24,208	0/0:15,0:15:20.06:0,20,244	0/0:24,0:23:41.02:0,41,347	1/1:3,8:11:22.48:169,22,0	1/1:6,8:13:4.17:120,4,0	1/1:8,16:24:47.80:361,48,0	0/0:24,0:24:40.11:0,40,324	0/0:27,0:27:53.34:0,53,445	0/0:27,0:27:59.44:0,59,519	0/0:13,0:13:11.92:0,12,94	1/1:6,12:18:44.32:418,44,0	1/1:8,21:29:60.07:626,60,0	1/1:2,7:9:11.24:107,11,0	1/1:7,12:19:34.02:272,34,0	1/1:8,19:27:55.66:493,56,0	1/1:4,8:12:20.04:148,20,0	0/0:21,0:21:37.80:0,38,314	1/1:4,22:25:37.09:626,37,0	1/1:6,16:24:9.89:320,10,0	0/0:16,0:16:41.97:0,42,360
chr10	93723583	.	AAC	A	3524.53	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=12.692;DP=570;FS=3.275;HRun=0;HaplotypeScore=128.5863;InbreedingCoeff=0.8265;MQ=48.11;MQ0=15;MQRankSum=-12.308;QD=20.14;ReadPosRankSum=0.077;VQSLOD=4.1073;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,14:26:30.99:438,31,0	0/0:13,0:12:19.40:0,19,320	0/0:26,0:4:7.10:0,7,72	0/0:25,0:5:8.90:0,9,121	0/0:22,0:22:30.52:0,31,721	1/1:17,0:16:39.27:386,39,0	1/1:19,0:18:47.63:509,48,0	0/0:32,0:32:1.12:0,1,805	0/0:15,0:13:24.07:0,24,358	0/0:14,0:14:16.88:0,17,461	0/0:22,0:21:44.51:0,45,685	1/1:9,0:9:5.87:241,6,0	1/1:12,0:11:23.20:248,23,0	1/1:24,0:24:56.50:551,57,0	0/0:21,0:21:33.96:0,34,531	0/0:30,0:30:63.79:0,64,1048	0/0:29,0:29:56.21:0,56,1012	0/0:13,0:13:5.07:0,5,155	0/0:24,0:23:7.14:0,7,316	0/0:24,0:24:64.02:0,64,545	0/1:8,0:8:7.59:8,0,68	1/1:17,1:18:34.73:290,35,0	1/1:29,0:29:74.47:669,74,0	1/1:12,1:13:21.54:186,22,0	0/0:18,0:18:38.85:0,39,571	0/0:27,0:26:72.15:0,72,634	0/0:25,0:25:47.88:0,48,418	0/0:15,0:15:35.48:0,35,556
chr10	93723585	.	C	CA	1267.22	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=12.716;DP=570;FS=9.310;HRun=9;HaplotypeScore=128.8237;InbreedingCoeff=0.9061;MQ=48.66;MQ0=14;MQRankSum=-11.491;QD=6.89;ReadPosRankSum=0.812;VQSLOD=0.7550;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:9.75:143,10,0	0/0:13,0:12:26.04:0,26,181	0/0:27,0:5:10.54:0,11,62	0/0:23,0:5:8.61:0,9,71	0/0:23,0:23:42.54:0,43,392	1/1:14,1:15:36.43:202,36,0	1/1:19,2:20:35.89:195,36,0	0/0:33,0:33:65.77:0,66,553	0/0:16,0:14:17.88:0,18,166	0/0:14,0:14:22.91:0,23,242	0/0:23,0:22:44.75:0,45,366	1/1:8,1:9:15.08:67,15,0	1/1:11,1:11:20.61:108,21,0	1/1:22,0:22:43.28:207,43,0	0/0:21,0:21:30.64:0,31,258	0/0:27,0:28:53.04:0,53,522	0/0:28,0:28:46.76:0,47,701	0/0:13,0:13:11.58:0,12,75	0/1:24,0:23:0.76:1,0,289	0/0:24,0:24:49.78:0,50,287	0/0:9,0:9:6.19:0,6,60	1/1:15,2:17:29.93:185,30,0	1/1:27,0:27:52.31:242,52,0	1/1:12,0:12:21.15:125,21,0	0/0:19,0:19:34.38:0,34,245	0/0:30,0:29:68.86:0,69,475	0/0:26,0:26:39.96:0,40,282	0/0:15,0:15:28.20:0,28,257
chr10	93723588	.	AAAC	A	4763.60	PASS	AB=0.994;AC=22;AF=0.393;AN=56;BaseQRankSum=9.009;DP=560;FS=1.194;HRun=0;HaplotypeScore=129.8547;InbreedingCoeff=0.5137;MQ=49.18;MQ0=14;MQRankSum=-11.563;QD=18.46;ReadPosRankSum=-0.590;VQSLOD=4.7794;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:24.24:143,0,24	0/1:12,0:11:48.03:48,0,173	0/0:29,0:7:6.19:0,6,122	0/0:24,0:5:11.91:0,12,147	0/0:22,0:22:13.86:0,14,499	1/1:2,13:15:39.13:540,39,0	1/1:4,18:21:48.04:608,48,0	0/1:34,0:34:99:224,0,546	0/0:15,0:13:18.03:0,18,213	0/1:15,0:15:75.42:75,0,282	0/0:23,0:22:18.50:0,18,484	1/1:3,6:9:21.07:286,21,0	1/1:2,9:10:27.04:374,27,0	1/1:5,17:22:54.89:730,55,0	0/0:18,0:18:15.81:0,16,237	0/1:26,1:28:57.59:58,0,635	0/0:29,0:29:64.22:0,64,1278	0/1:12,0:12:33.07:33,0,100	0/0:22,0:21:35.77:0,36,749	0/0:23,0:23:65.67:0,66,1140	0/0:10,0:10:7.67:0,8,287	1/1:5,12:17:39.31:439,39,0	1/1:6,20:26:70.73:939,71,0	1/1:1,10:11:23.87:267,24,0	0/0:19,0:19:36.03:0,36,417	0/0:29,0:28:79.55:0,80,1334	0/0:26,0:26:55.82:0,56,824	0/0:13,0:13:13.45:0,13,357
chr10	93723591	.	C	CAAA	9032.18	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=1.151;DP=565;FS=0.000;HRun=10;HaplotypeScore=119.7833;InbreedingCoeff=0.8429;MQ=54.67;MQ0=10;MQRankSum=-7.737;QD=22.36;ReadPosRankSum=0.344;VQSLOD=3.0703;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:40.44:492,40,0	1/1:2,9:11:24.08:444,24,0	0/0:29,0:9:10.45:0,10,117	0/1:22,0:7:3.01:3,0,82	1/1:4,19:24:44.87:659,45,0	1/1:14,0:14:37.29:308,37,0	1/1:20,0:20:43.11:322,43,0	1/1:8,26:36:58.70:1088,59,0	1/1:3,11:15:9.03:159,9,0	1/1:4,13:18:39.03:566,39,0	1/1:3,18:23:42.06:702,42,0	1/1:7,0:7:20.68:153,21,0	1/1:11,0:10:24.26:173,24,0	1/1:18,0:19:45.34:382,45,0	1/1:6,11:18:18.04:297,18,0	1/1:16,10:27:59.87:919,60,0	0/0:29,0:30:50.99:0,51,760	1/1:0,12:14:12.04:214,12,0	0/0:23,0:22:40.08:0,40,452	0/0:22,0:23:62.95:0,63,725	0/1:11,0:11:4.48:4,0,217	1/1:16,0:16:33.55:256,34,0	1/1:22,0:23:61.18:593,61,0	1/1:11,0:11:18.13:122,18,0	1/1:1,17:20:33.09:584,33,0	0/0:28,0:28:66.05:0,66,783	0/0:23,0:25:44.95:0,45,506	1/1:2,16:18:32.98:591,33,0
chr10	93723595	.	A	AAAC	7687.57	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=6.175;DP=571;FS=0.366;HRun=0;HaplotypeScore=126.3511;InbreedingCoeff=0.5169;MQ=60.10;MQ0=9;MQRankSum=-8.918;QD=20.28;ReadPosRankSum=6.408;VQSLOD=4.5275;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,20:28:36.29:805,36,0	1/1:13,0:12:5.12:227,5,0	0/0:32,0:12:33.35:0,33,333	0/0:21,0:9:23.34:0,23,224	0/1:24,0:24:69.21:232,0,69	1/1:15,0:15:42.05:556,42,0	1/1:20,0:20:46.35:581,46,0	0/1:37,0:37:99:432,0,117	0/1:16,0:15:56.28:56,0,62	1/1:17,0:17:23.43:234,23,0	0/1:25,0:25:38.02:292,0,38	1/1:7,0:7:21.01:265,21,0	1/1:13,0:13:33.01:378,33,0	1/1:19,0:19:53.64:676,54,0	0/1:17,0:17:34.04:120,0,34	0/1:26,0:26:24.12:399,0,24	0/0:30,0:30:84.87:0,85,1205	1/1:14,0:14:11.86:112,12,0	0/0:23,0:22:59.80:0,60,774	0/0:23,0:23:66.18:0,66,1029	0/0:12,0:12:24.70:0,25,376	1/1:15,1:16:41.64:489,42,0	1/1:24,0:24:71.61:986,72,0	1/1:10,1:11:20.75:233,21,0	1/1:19,0:19:30.69:327,31,0	0/0:28,0:28:81.17:0,81,1192	0/0:23,0:23:51.11:0,51,746	1/1:18,0:18:6.62:286,7,0
chr10	93723767	.	A	AG	324.21	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.110;DP=483;FS=6.676;HRun=2;HaplotypeScore=90.0690;InbreedingCoeff=0.8480;MQ=73.84;MQ0=1;MQRankSum=-0.699;QD=15.44;ReadPosRankSum=0.646;VQSLOD=3.2924;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:41.95:419,42,0	0/0:9,0:9:18.94:0,19,113	0/0:16,0:15:19.60:0,20,184	0/0:12,0:9:7.52:0,8,86	0/0:20,0:20:22.49:0,22,134	0/0:16,0:15:39.07:0,39,193	0/0:20,0:20:46.39:0,46,276	0/0:22,0:22:58.22:0,58,413	0/0:12,0:12:18.86:0,19,108	0/0:17,0:17:31.92:0,32,246	0/0:15,0:15:29.07:0,29,174	0/0:18,0:18:46.03:0,46,260	0/0:21,0:21:50.46:0,50,255	0/0:17,0:17:43.11:0,43,215	0/0:20,0:20:27.58:0,28,138	0/0:23,0:23:34.28:0,34,201	0/0:15,0:15:24.31:0,24,136	0/0:10,0:10:23.12:0,23,148	0/0:19,0:19:47.01:0,47,289	0/0:22,0:22:47.65:0,48,311	0/0:15,0:15:23.34:0,23,166	0/0:17,0:17:42.99:0,43,242	0/0:18,0:18:38.49:0,38,232	0/0:16,0:16:39.70:0,40,202	0/0:16,0:16:26.04:0,26,164	0/0:24,0:24:52.07:0,52,380	0/0:22,0:22:10.36:0,10,141	0/0:10,0:10:13.36:0,13,83
chr10	93723769	.	G	GTTT	5663.83	PASS	AB=0.969;AC=54;AF=0.964;AN=56;BaseQRankSum=-3.991;DP=505;FS=1.077;HRun=13;HaplotypeScore=94.2835;InbreedingCoeff=0.3799;MQ=70.74;MQ0=1;MQRankSum=-3.088;QD=11.22;ReadPosRankSum=1.532;VQSLOD=2.4637;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:16.62:83,17,0	1/1:3,0:10:12.84:93,13,0	0/1:14,0:13:3.89:4,0,109	0/1:10,0:8:2.88:3,0,39	1/1:1,1:20:46.76:365,47,0	1/1:16,0:15:33.90:150,34,0	1/1:21,0:21:17.24:67,17,0	1/1:12,0:27:50.83:402,51,0	1/1:3,0:12:16.19:117,16,0	1/1:4,6:17:30.67:278,31,0	1/1:3,0:15:31.50:221,32,0	1/1:19,0:19:35.51:129,36,0	1/1:21,0:21:40.93:185,41,0	1/1:17,0:17:24.86:144,25,0	1/1:3,1:20:26.94:256,27,0	1/1:4,2:22:38.42:355,38,0	1/1:4,11:18:24.03:369,24,0	1/1:5,1:12:8.98:72,9,0	1/1:6,0:23:52.18:493,52,0	1/1:5,2:22:43.08:391,43,0	1/1:7,0:17:8.93:69,9,0	1/1:16,0:16:32.06:120,32,0	1/1:17,0:17:20.18:107,20,0	1/1:16,0:16:33.65:129,34,0	1/1:5,1:18:14.97:147,15,0	1/1:9,1:27:45.62:378,46,0	1/1:3,3:22:40.09:384,40,0	1/1:2,1:12:16.23:154,16,0
chr10	93723778	.	T	TTG	7020.56	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=-4.065;DP=515;FS=3.722;HRun=0;HaplotypeScore=75.9192;InbreedingCoeff=-0.1331;MQ=69.73;MQ0=1;MQRankSum=-1.694;QD=14.94;ReadPosRankSum=10.673;VQSLOD=3.4778;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:20:53.66:705,54,0	1/1:9,0:9:9.70:57,10,0	0/0:14,0:12:26.28:0,26,229	0/0:12,0:8:5.10:0,5,64	0/1:25,0:25:72.41:72,0,132	1/1:0,20:20:42.61:661,43,0	1/1:1,20:23:38.91:597,39,0	0/1:26,0:26:44.20:44,0,154	0/1:13,0:12:49.61:50,0,68	0/1:19,0:19:0.15:0,0,130	0/1:14,0:14:33.79:51,0,34	1/1:2,18:20:38.24:675,38,0	1/1:1,21:26:56.96:882,57,0	1/1:2,14:17:41.90:633,42,0	0/1:23,0:23:62.49:77,0,62	0/1:22,0:22:61.17:108,0,61	0/0:19,0:19:0.61:0,1,59	0/1:12,0:12:16.91:17,0,83	0/1:22,0:22:69.05:97,0,69	0/1:19,0:19:34.80:64,0,35	0/1:15,0:15:39.39:39,0,99	1/1:1,14:15:42.13:666,42,0	1/1:0,12:16:47.69:653,48,0	1/1:0,18:18:42.14:678,42,0	0/1:16,0:16:17.70:18,0,54	0/1:26,0:26:46.55:47,0,176	0/1:23,0:23:49.75:82,0,50	1/1:10,0:10:1.77:48,2,0
chr10	93725535	.	C	CA	8003	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-14.215;DP=570;FS=2.311;HRun=4;HaplotypeScore=56.3254;InbreedingCoeff=0.9981;MQ=90.14;MQ0=0;MQRankSum=-2.608;QD=36.54;ReadPosRankSum=1.018;VQSLOD=5.1302;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.21:0,96,1055	1/1:2,10:12:30.10:409,30,0	0/0:19,0:19:54.13:0,54,592	0/0:25,0:25:54.13:0,54,600	1/1:1,21:22:60.16:800,60,0	0/0:17,0:17:42.12:0,42,472	0/0:15,0:15:45.11:0,45,499	1/1:3,19:22:57.18:763,57,0	1/1:2,17:19:48.16:656,48,0	1/1:2,27:29:81.23:1074,81,0	1/1:0,8:8:21.07:287,21,0	0/0:30,0:30:87.22:0,87,967	0/0:13,0:13:36.10:0,36,408	0/0:19,0:19:54.14:0,54,602	1/1:1,12:13:33.11:452,33,0	1/1:0,15:15:42.14:575,42,0	0/0:41,0:41:99:0,120,1348	1/1:1,39:40:99:1519,111,0	0/0:20,0:20:60.17:0,60,681	0/0:11,0:11:24.07:0,24,272	0/0:23,0:23:63.18:0,63,715	0/0:16,0:16:42.12:0,42,476	0/0:8,0:8:24.07:0,24,272	0/0:22,0:22:66.17:0,66,738	1/1:1,29:29:87.29:1183,87,0	0/0:17,0:17:48.14:0,48,545	0/0:20,0:20:60.16:0,60,669	1/1:1,8:9:21.07:287,21,0
chr10	93726751	.	G	GA	973.36	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.716;DP=627;FS=2.197;HRun=9;HaplotypeScore=59.8565;InbreedingCoeff=0.9671;MQ=67.20;MQ0=0;MQRankSum=-2.228;QD=22.12;ReadPosRankSum=-1.154;VQSLOD=4.0504;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:54.15:597,54,0	0/0:14,0:14:38.98:0,39,339	0/0:17,0:17:41.97:0,42,361	0/0:9,0:9:20.98:0,21,182	0/0:31,0:31:86.96:0,87,751	0/0:25,0:25:68.97:0,69,595	1/1:2,19:21:45.12:498,45,0	0/0:18,1:19:8.79:0,9,305	0/0:23,0:24:53:0,53,444	0/0:29,0:29:80.97:0,81,703	0/0:20,0:20:47.97:0,48,416	0/0:22,0:22:53.96:0,54,465	0/0:28,0:28:74.96:0,75,645	0/0:19,0:19:47.99:0,48,417	0/0:29,0:29:72.24:0,72,669	0/0:19,0:19:53.97:0,54,465	0/0:26,0:26:68.95:0,69,592	0/0:18,0:18:44.99:0,45,390	0/0:24,0:24:47.98:0,48,416	0/0:31,0:31:83.96:0,84,729	0/0:14,0:14:35.98:0,36,312	0/0:17,0:17:47.99:0,48,416	0/0:31,0:31:53.50:0,54,626	0/0:15,0:15:32.95:0,33,279	0/0:19,0:19:47.98:0,48,417	0/0:29,0:29:83.97:0,84,727	0/0:30,0:30:83.98:0,84,729	0/0:24,0:24:71.99:0,72,625
chr10	93726926	.	T	TA	3523.22	PASS	AB=0.954;AC=14;AF=0.250;AN=56;BaseQRankSum=11.808;DP=574;FS=5.127;HRun=10;HaplotypeScore=85.0825;InbreedingCoeff=0.8114;MQ=74.93;MQ0=0;MQRankSum=-5.368;QD=18.45;ReadPosRankSum=-3.756;VQSLOD=2.7814;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:21:51.27:257,51,0	0/0:7,0:7:17.98:0,18,148	0/1:18,1:16:13.09:13,0,152	0/1:22,1:21:41.64:42,0,155	0/0:43,0:46:96.67:0,97,757	0/0:24,0:24:59.92:0,60,492	0/0:16,0:16:32.88:0,33,266	0/0:25,0:25:53.90:0,54,441	0/0:19,0:19:47.91:0,48,392	0/0:20,1:21:27.93:0,28,436	0/0:16,0:16:41.94:0,42,345	0/0:21,0:21:50.92:0,51,416	0/0:13,0:13:32.91:0,33,266	0/0:22,0:22:62.91:0,63,517	0/0:12,0:13:35:0,35,277	0/0:14,0:15:37.96:0,38,296	0/0:0,0:19:38.70:0,39,112	0/0:14,0:16:30.68:0,31,273	1/1:7,17:25:38.31:584,38,0	1/1:7,20:27:72.14:751,72,0	1/1:3,8:11:30.05:305,30,0	0/0:24,0:24:56.89:0,57,465	0/0:20,0:21:37.87:0,38,290	0/0:21,0:21:59.92:0,60,493	0/0:10,0:10:23.97:0,24,197	1/1:11,17:28:69.06:685,69,0	1/1:13,24:37:65.56:886,66,0	0/0:14,0:14:35.96:0,36,296
chr10	93726954	.	C	CA	2820.86	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.467;DP=618;FS=0.415;HRun=2;HaplotypeScore=84.3166;InbreedingCoeff=0.9943;MQ=64.51;MQ0=0;MQRankSum=-6.674;QD=23.31;ReadPosRankSum=-0.541;VQSLOD=3.3163;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:62.82:0,63,345	0/0:6,0:6:18.06:0,18,223	0/0:22,0:16:31.67:0,32,455	0/0:20,0:18:49.14:0,49,544	0/0:39,0:39:99:0,111,1373	0/0:27,0:27:78.25:0,78,965	0/0:14,0:14:39.11:0,39,470	0/0:38,0:38:99:0,105,1276	0/0:20,0:20:57.18:0,57,706	0/0:24,0:24:68.84:0,69,842	0/0:18,0:18:51.16:0,51,632	0/0:27,0:27:68.80:0,69,826	0/0:14,0:14:39.11:0,39,470	0/0:27,0:27:81.24:0,81,989	0/0:18,0:18:48.15:0,48,594	0/0:12,0:12:30.09:0,30,371	0/0:18,0:18:51.16:0,51,631	0/0:21,0:21:54.12:0,54,646	1/1:7,14:22:17.88:448,18,0	1/1:4,17:23:41.73:590,42,0	1/1:4,9:13:18.73:251,19,0	0/0:26,0:26:72.23:0,72,888	0/0:21,0:21:54.17:0,54,668	0/0:21,0:21:57.65:0,58,707	0/0:13,0:13:36.10:0,36,434	1/1:6,24:30:67.85:798,68,0	1/1:10,23:33:56.24:909,56,0	0/0:26,0:26:78.25:0,78,964
chr10	93727050	.	C	CT	830.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.690;DP=656;FS=1.649;HRun=6;HaplotypeScore=62.4230;InbreedingCoeff=0.9996;MQ=86.50;MQ0=0;MQRankSum=-4.121;QD=26.79;ReadPosRankSum=-0.820;VQSLOD=3.7323;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:75.20:925,75,0	0/0:11,0:11:33.06:0,33,330	0/0:27,0:27:60.12:0,60,603	0/0:19,0:19:45.55:0,46,451	0/0:28,0:28:75.16:0,75,765	0/0:24,0:24:69.14:0,69,696	0/0:25,0:25:69.14:0,69,697	0/0:25,0:25:60.08:0,60,592	0/0:19,0:19:51.11:0,51,520	0/0:23,0:23:57.12:0,57,578	0/0:16,0:16:48.10:0,48,484	0/0:29,0:29:72.12:0,72,719	0/0:27,0:27:72.11:0,72,714	0/0:21,0:21:54.12:0,54,550	0/0:27,0:27:81.17:0,81,821	0/0:24,0:24:69.07:0,69,692	0/0:26,0:26:57.11:0,57,581	0/0:17,0:17:39.07:0,39,389	0/0:29,0:29:84.12:0,84,822	0/0:25,0:25:63.06:0,63,624	0/0:20,0:20:57.10:0,57,573	0/0:15,0:15:42.08:0,42,422	0/0:19,0:19:48.09:0,48,482	0/0:21,0:21:60.09:0,60,601	0/0:28,0:28:69.12:0,69,695	0/0:24,0:24:69.13:0,69,692	0/0:24,0:24:66.14:0,66,673	0/0:32,0:32:66.11:0,66,659
chr10	93727362	.	CT	C	5127.38	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.201;DP=702;FS=4.010;HRun=4;HaplotypeScore=66.3638;InbreedingCoeff=0.9996;MQ=86.19;MQ0=0;MQRankSum=-3.049;QD=31.85;ReadPosRankSum=2.201;VQSLOD=5.5224;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:99:1260,105,0	0/0:16,0:16:45.15:0,45,630	0/0:29,0:29:77.98:0,78,991	0/0:28,0:28:75.23:0,75,989	0/0:19,0:19:54.18:0,54,756	0/0:15,0:15:45.12:0,45,596	0/0:27,0:27:78.24:0,78,1061	0/0:31,0:31:87.29:0,87,1215	0/0:25,0:25:75.24:0,75,1034	0/0:30,0:30:87.29:0,87,1200	0/0:14,0:14:42.14:0,42,588	0/0:39,0:39:99:0,114,1590	0/0:29,0:29:81.21:0,81,1078	0/0:27,0:27:75.24:0,75,1031	0/0:36,0:36:99:0,108,1491	0/0:33,0:33:96.32:0,96,1339	0/0:36,0:36:99:0,105,1445	0/0:24,0:24:66.64:0,67,875	1/1:1,25:26:75.22:888,75,0	1/1:2,19:21:54.17:646,54,0	1/1:0,25:25:69.21:828,69,0	0/0:17,0:17:51.16:0,51,697	0/0:16,0:16:48.14:0,48,638	0/0:18,0:18:54.12:0,54,717	0/0:19,0:19:54.18:0,54,753	1/1:4,21:25:24.17:714,24,0	1/1:1,24:25:66.20:792,66,0	0/0:13,0:13:39.13:0,39,546
chr10	93728125	.	G	GAT	12884.04	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-17.529;DP=798;FS=8.756;HRun=0;HaplotypeScore=89.8769;InbreedingCoeff=0.9993;MQ=86.53;MQ0=2;MQRankSum=-9.146;QD=44.58;ReadPosRankSum=1.851;VQSLOD=5.8738;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,1442	1/1:0,9:9:21.07:372,21,0	0/0:33,0:33:72.22:0,72,952	0/0:26,0:25:56.46:0,56,776	1/1:2,24:26:72.25:1272,72,0	0/0:21,0:21:60.20:0,60,823	0/0:28,0:28:78.25:0,78,1053	1/1:7,32:39:96.30:1664,96,0	1/1:3,32:35:93.32:1645,93,0	1/1:3,28:31:84.24:1452,84,0	1/1:1,26:27:69.24:1223,69,0	0/0:37,0:37:99:0,105,1421	0/0:34,0:34:93.31:0,93,1274	0/0:21,0:21:63.19:0,63,847	1/1:1,33:34:87.30:1544,87,0	1/1:2,34:37:90.30:1597,90,0	0/0:29,0:29:78.24:0,78,1053	1/1:3,14:16:42.14:730,42,0	0/0:26,0:26:66.21:0,66,893	0/0:32,0:32:93.31:0,93,1275	0/0:39,0:39:99:0,114,1567	0/0:26,0:26:72.24:0,72,989	0/0:23,0:23:69.21:0,69,930	0/0:40,0:40:99:0,111,1485	1/1:3,16:18:45.15:799,45,0	0/0:27,2:29:28.02:0,28,1018	0/0:27,0:27:72.24:0,72,987	1/1:3,12:15:33.11:586,33,0
chr10	93728263	.	A	AG	7313.26	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-0.453;DP=761;FS=0.307;HRun=4;HaplotypeScore=80.7768;InbreedingCoeff=0.9999;MQ=82.27;MQ0=0;MQRankSum=0.458;QD=34.99;ReadPosRankSum=-0.152;VQSLOD=4.9607;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:34:84.28:1148,84,0	0/0:13,0:13:36.09:0,36,398	0/0:23,0:23:63.05:0,63,669	0/0:30,0:29:47.55:0,48,705	0/0:24,0:24:66.18:0,66,740	0/0:26,0:26:78.13:0,78,841	0/0:27,0:27:75.20:0,75,841	0/0:40,0:40:99:0,105,1146	0/0:33,0:33:96.23:0,96,1061	0/0:29,0:29:81.22:0,81,911	0/0:16,0:16:48.14:0,48,544	0/0:32,0:32:96.24:0,96,1061	0/0:27,0:27:75.19:0,75,832	0/0:23,0:23:63.14:0,63,693	0/0:26,0:26:75.20:0,75,843	0/0:36,0:36:99:0,102,1143	0/0:30,0:29:81.17:0,81,876	0/0:15,0:15:45.09:0,45,490	1/1:1,22:23:69.16:871,69,0	1/1:1,28:29:84.23:1113,84,0	1/1:1,57:57:99:1927,141,0	0/0:16,0:16:42.12:0,42,476	0/0:20,0:20:57.13:0,57,625	0/0:32,0:31:84.18:0,84,919	0/0:20,0:20:57.16:0,57,646	1/1:4,34:38:72.47:1353,72,0	1/1:3,24:27:66.22:902,66,0	0/0:14,0:14:39.11:0,39,442
chr10	93728466	.	C	CT	2021.95	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.144;DP=774;FS=0.000;HRun=2;HaplotypeScore=84.3366;InbreedingCoeff=0.9997;MQ=92.25;MQ0=0;MQRankSum=-3.877;QD=41.26;ReadPosRankSum=2.728;VQSLOD=3.6568;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,49:49:99:2117,147,0	0/0:11,0:11:33.08:0,33,393	0/0:35,0:35:93.29:0,93,1139	0/0:28,0:29:75.19:0,75,898	0/0:29,0:29:84.26:0,84,1040	0/0:15,0:15:45.14:0,45,558	0/0:30,0:30:87.21:0,87,1026	0/0:25,0:25:72.23:0,72,893	0/0:44,0:44:99:0,129,1586	0/0:17,0:17:48.15:0,48,594	0/0:21,0:21:54.17:0,54,669	0/0:28,0:28:84.26:0,84,1040	0/0:22,0:22:66.19:0,66,804	0/0:27,0:27:81.25:0,81,1004	0/0:30,0:30:87.25:0,87,1054	0/0:21,0:21:60.18:0,60,731	0/0:43,0:43:99:0,126,1549	0/0:24,0:24:72.23:0,72,890	0/0:20,0:20:57.18:0,57,707	0/0:27,0:27:81.25:0,81,1004	0/0:57,0:57:99:0,168,2056	0/0:25,0:25:75.24:0,75,930	0/0:21,0:21:63.20:0,63,781	0/0:35,0:35:99:0,102,1265	0/0:21,0:21:57.18:0,57,705	0/0:27,0:27:78.24:0,78,966	0/0:24,0:24:69.22:0,69,855	0/0:17,0:17:48.12:0,48,580
chr10	93729443	.	T	TACAC	5521.45	PASS	AB=0.707;AC=15;AF=0.268;AN=56;BaseQRankSum=2.541;DP=744;FS=2.378;HRun=0;HaplotypeScore=167.3950;InbreedingCoeff=0.7216;MQ=57.10;MQ0=13;MQRankSum=-2.142;QD=23.01;ReadPosRankSum=1.121;VQSLOD=4.8647;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:42:71.76:0,72,1197	0/0:13,0:15:33.10:0,33,489	0/0:51,0:21:18.89:0,19,282	0/0:46,0:17:16.37:0,16,211	0/0:19,0:20:45.15:0,45,708	0/1:17,4:24:20.56:403,0,21	1/1:19,14:37:44.75:1096,45,0	0/0:40,0:40:26.10:0,26,809	0/0:15,0:17:36.11:0,36,542	0/0:26,0:28:51.13:0,51,705	0/0:15,0:16:21.92:0,22,337	0/1:16,6:28:20.37:289,0,20	1/1:14,5:20:32.92:506,33,0	0/1:9,11:22:11.96:714,0,12	0/0:19,0:20:51.15:0,51,775	0/0:23,0:24:51.17:0,51,811	1/1:26,6:39:58.28:1072,58,0	0/0:16,0:19:39.13:0,39,610	0/0:14,0:11:15.05:0,15,246	0/0:13,0:13:27.09:0,27,442	0/0:53,0:61:99:0,111,1638	1/1:9,4:14:14.49:305,14,0	1/1:15,4:19:15.04:336,15,0	1/1:25,11:37:40.90:800,41,0	0/0:17,0:18:31.52:0,32,583	0/0:22,0:26:51.15:0,51,751	0/0:22,0:23:51.16:0,51,793	0/0:9,0:10:24.04:0,24,344
chr10	93729473	.	A	AACGC	3001.76	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=3.073;DP=699;FS=4.413;HRun=0;HaplotypeScore=163.0831;InbreedingCoeff=0.9873;MQ=54.62;MQ0=11;MQRankSum=-5.823;QD=15.63;ReadPosRankSum=-6.911;VQSLOD=1.8812;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:83.83:0,84,1333	0/0:15,0:15:33.10:0,33,524	0/0:44,0:21:29.21:0,29,489	0/0:39,0:17:27.02:0,27,404	0/0:23,0:23:51.10:0,51,828	1/1:6,12:19:22.35:215,22,0	1/1:19,17:37:29.74:597,30,0	0/0:32,0:32:57.11:0,57,788	0/0:16,0:16:42.09:0,42,602	0/0:19,0:19:45.15:0,45,735	0/0:8,0:8:15.04:0,15,223	1/1:9,15:29:37.99:554,38,0	1/1:9,12:21:44.84:691,45,0	1/1:10,14:24:32:536,32,0	0/0:22,0:21:53.84:0,54,878	0/0:18,0:18:36.10:0,36,555	0/0:35,0:35:62.98:0,63,936	0/0:17,0:17:39.03:0,39,559	0/0:28,0:24:45.08:0,45,607	0/0:14,0:14:27.05:0,27,373	0/0:51,0:50:99:0,102,1564	1/1:12,3:15:17.52:183,18,0	1/1:10,5:15:11.81:91,12,0	1/1:18,14:32:16.95:341,17,0	0/0:23,0:23:45.13:0,45,708	0/0:31,0:30:75.23:0,75,1180	0/0:23,0:22:42.08:0,42,599	0/0:11,0:11:30.08:0,30,473
chr10	93730170	.	GTT	G	5404.26	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-5.910;DP=557;FS=4.262;HRun=14;HaplotypeScore=73.0501;InbreedingCoeff=0.6173;MQ=69.89;MQ0=2;MQRankSum=-0.602;QD=11.80;ReadPosRankSum=4.518;VQSLOD=3.9279;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:0:0,0,0	1/1:4,3:7:11.78:106,12,0	0/0:29,0:17:19.54:0,20,180	0/0:17,0:11:4.74:0,5,23	1/1:9,18:26:41.11:362,41,0	1/1:3,22:25:50.90:471,51,0	1/1:8,19:25:41.70:365,42,0	1/1:13,18:35:31.11:399,31,0	1/1:7,5:12:17.93:166,18,0	1/1:9,8:17:21.14:234,21,0	1/1:2,11:14:8.30:188,8,0	1/1:8,18:26:32.71:289,33,0	1/1:6,12:16:20.36:216,20,0	1/1:3,11:15:11.22:142,11,0	1/1:7,20:27:41.94:384,42,0	1/1:8,13:21:23.87:221,24,0	1/1:8,2:33:47.04:232,47,0	1/1:7,26:33:26.08:506,26,0	0/0:9,0:9:2.74:0,3,13	0/0:10,0:10:0:0,0,0	0/0:9,0:9:0:0,0,0	1/1:5,10:14:11.87:156,12,0	1/1:6,4:10:2.82:75,3,0	1/1:9,17:25:38.83:402,39,0	1/1:7,24:31:42.48:389,42,0	1/1:19,0:19:2.92:27,3,0	0/0:10,0:10:0:0,0,0	1/1:1,8:10:2.86:75,3,0
chr10	93730309	.	ATG	A	750.15	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=4.439;DP=452;FS=0.845;HRun=0;HaplotypeScore=79.3501;InbreedingCoeff=0.5272;MQ=65.99;MQ0=1;MQRankSum=-4.366;QD=23.44;ReadPosRankSum=1.179;VQSLOD=3.7540;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:57.11:839,57,0	0/0:9,0:9:27.09:0,27,518	0/1:11,0:11:16.02:16,0,314	0/0:13,0:11:31.93:0,32,411	0/0:21,0:21:63.18:0,63,1126	0/0:23,0:23:68.86:0,69,1131	0/0:12,0:12:36.09:0,36,597	0/0:46,0:46:99:0,132,2319	0/0:12,0:12:33.07:0,33,590	0/0:23,0:23:69.19:0,69,1167	0/0:18,0:18:51.14:0,51,902	0/0:16,0:16:48.15:0,48,891	0/0:11,0:11:3.12:0,3,428	0/0:8,0:8:24.01:0,24,358	0/0:18,0:18:48.13:0,48,854	0/0:18,0:18:51.14:0,51,909	0/0:25,0:25:69.16:0,69,1173	0/0:17,0:17:51.07:0,51,871	0/0:21,0:21:59.70:0,60,957	0/0:14,0:14:39.13:0,39,749	0/0:13,0:13:18.06:0,18,346	0/0:4,0:4:12.04:0,12,203	0/0:10,0:10:30.07:0,30,511	0/0:16,0:16:36.56:0,37,623	0/0:22,0:22:57.16:0,57,1005	0/0:10,0:10:30.10:0,30,573	0/0:16,0:16:42.13:0,42,772	0/0:4,0:4:6.02:0,6,115
chr10	93730345	.	C	CGTGT	4567.74	PASS	AB=0.861;AC=46;AF=0.852;AN=54;BaseQRankSum=1.152;DP=573;FS=1.062;HRun=0;HaplotypeScore=149.3241;InbreedingCoeff=0.3787;MQ=56.73;MQ0=22;MQRankSum=-0.074;QD=10.15;ReadPosRankSum=-0.946;VQSLOD=4.3083;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,2:32:26.73:290,27,0	1/1:8,0:8:9.03:137,9,0	0/0:42,0:18:2.13:0,2,39	0/0:43,0:18:2.22:0,2,7	1/1:17,0:22:3.01:52,3,0	1/1:18,0:19:3.01:52,3,0	1/1:14,0:15:12.04:181,12,0	0/1:26,0:26:73.65:220,0,74	1/1:9,1:13:6.02:104,6,0	1/1:22,0:28:27.07:401,27,0	1/1:20,0:20:18.04:228,18,0	1/1:15,0:17:6.02:104,6,0	1/1:8,0:12:9.03:148,9,0	1/1:11,0:11:5.99:50,6,0	1/1:18,0:21:3.90:54,4,0	1/1:13,0:17:3.01:52,3,0	0/0:24,0:26:30.28:0,30,470	1/1:19,0:20:24.07:330,24,0	1/1:14,8:24:22.31:384,22,0	1/1:6,6:14:8.72:213,9,0	1/1:10,17:28:12.04:285,12,0	0/1:8,0:13:0:0,0,0	./.	1/1:20,3:28:20.10:357,20,0	1/1:5,0:14:3.01:52,3,0	1/1:12,8:22:35.54:502,36,0	1/1:7,8:16:15.05:357,15,0	1/1:0,0:5:2.74:12,3,0
chr10	93730418	.	TC	T	694.18	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.143;DP=464;FS=0.000;HRun=7;HaplotypeScore=67.8343;InbreedingCoeff=0.7228;MQ=77.26;MQ0=5;MQRankSum=-1.075;QD=23.14;ReadPosRankSum=-0.738;VQSLOD=3.3383;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.11:0,69,832	0/0:2,0:2:2.97:0,3,20	0/0:24,0:24:38.93:0,39,536	0/0:23,0:23:49.76:0,50,565	0/0:22,0:20:45.13:0,45,553	0/0:16,0:16:45.14:0,45,566	0/0:16,0:16:39.11:0,39,478	0/0:34,0:34:90.27:0,90,1100	0/0:15,0:15:42.13:0,42,528	0/0:18,0:18:51.16:0,51,639	0/0:7,0:7:18.06:0,18,227	0/0:8,0:8:24.01:0,24,278	0/0:13,0:12:33.06:0,33,397	0/0:15,0:15:42.07:0,42,508	0/0:17,0:17:44.89:0,45,523	0/0:16,0:16:42.08:0,42,510	1/1:2,28:30:78.16:789,78,0	0/0:12,0:12:33.11:0,33,414	0/0:12,0:12:30.10:0,30,375	0/0:15,0:14:42.11:0,42,504	0/0:29,0:30:70.30:0,70,848	0/0:6,0:6:14.96:0,15,168	0/0:11,0:10:30.10:0,30,377	0/0:31,0:28:66.05:0,66,761	0/0:19,0:19:54.16:0,54,662	0/0:11,0:11:33.11:0,33,415	0/0:14,0:14:38.75:0,39,446	0/0:1,0:1:3.01:0,3,38
chr10	93730715	.	CGG	C	3493.03	PASS	AB=0.895;AC=35;AF=0.673;AN=52;BaseQRankSum=-5.340;DP=276;FS=1.534;HRun=11;HaplotypeScore=46.2687;InbreedingCoeff=0.7028;MQ=70.76;MQ0=1;MQRankSum=1.637;QD=16.79;ReadPosRankSum=3.713;VQSLOD=1.6574;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:9.01:0,9,108	0/0:2,0:2:0:0,0,0	0/0:5,0:5:10.81:0,11,93	0/0:6,0:6:5.75:0,6,55	1/1:3,13:16:26.93:285,27,0	1/1:1,2:3:3:32,3,0	1/1:8,11:19:30.04:318,30,0	1/1:4,5:9:20.21:183,20,0	1/1:5,10:15:36.06:373,36,0	1/1:0,5:5:12:113,12,0	1/1:5,6:11:12.02:128,12,0	1/1:3,13:17:23.78:234,24,0	1/1:6,1:7:17.80:161,18,0	1/1:10,4:14:2.95:159,3,0	1/1:5,9:14:27.05:277,27,0	1/1:1,8:9:18.04:192,18,0	0/0:24,0:24:18.53:0,19,230	1/1:2,10:12:27.05:287,27,0	./.	0/0:3,0:3:2.96:0,3,19	0/1:15,1:16:22.32:22,0,47	1/1:5,3:8:8.99:95,9,0	1/1:2,7:9:21.05:220,21,0	1/1:4,9:13:24.04:255,24,0	1/1:6,4:10:15.03:159,15,0	0/0:5,0:5:5.48:0,5,31	0/0:9,0:11:23.70:0,24,167	./.
chr10	93730725	.	GGA	G	1017.34	PASS	AB=0.919;AC=18;AF=0.346;AN=52;BaseQRankSum=7.675;DP=287;FS=16.464;HRun=0;HaplotypeScore=54.2841;InbreedingCoeff=-0.1793;MQ=68.94;MQ0=1;MQRankSum=1.720;QD=5.16;ReadPosRankSum=9.714;VQSLOD=0.2877;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:12.01:0,12,144	./.	0/0:8,0:7:16.40:0,16,188	0/0:9,0:8:15.39:0,15,152	0/1:18,2:20:64.64:92,0,65	0/0:4,0:4:1.30:0,1,43	0/1:16,1:17:62.40:91,0,62	0/1:10,2:12:57.77:58,0,110	1/1:11,4:15:10.66:188,11,0	0/1:6,0:6:4.38:4,0,45	0/1:7,0:7:1.85:29,0,2	0/1:20,1:21:51.32:51,0,79	0/1:5,2:7:15.88:80,0,16	0/1:11,1:12:65.87:66,0,86	0/1:13,3:16:61.47:169,0,61	0/1:10,0:10:27.46:33,0,27	0/0:22,0:22:52.27:0,52,442	1/1:10,1:11:22.40:102,22,0	0/0:4,0:4:8.95:0,9,70	0/0:4,0:4:11.94:0,12,91	0/0:17,0:16:26.33:0,26,242	0/1:7,1:8:27.56:28,0,72	0/1:11,2:13:32.54:90,0,33	0/1:13,0:13:37.37:47,0,37	0/1:8,1:9:48.70:49,0,66	0/0:4,0:4:11.51:0,12,104	0/0:12,0:12:29.48:0,29,250	./.
chr10	93734551	.	G	GACACACACACACAC	12746.95	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-1.357;DP=661;FS=1.746;HRun=0;HaplotypeScore=291.2385;InbreedingCoeff=0.3829;MQ=62.75;MQ0=8;MQRankSum=-0.710;QD=20.40;ReadPosRankSum=0.681;VQSLOD=3.1664;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:11.55:204,12,0	1/1:11,0:11:14.98:552,15,0	0/0:36,0:20:5.69:0,6,56	0/1:55,0:35:9.92:10,0,65	0/1:20,0:20:0.13:0,0,0	1/1:24,0:23:24.05:657,24,0	1/1:34,0:34:28.82:950,29,0	1/1:28,0:28:32.36:663,32,0	1/1:16,0:16:11.77:267,12,0	1/1:14,0:13:21.95:619,22,0	1/1:19,0:19:8.97:199,9,0	1/1:14,4:28:5.83:379,6,0	1/1:23,0:22:29.92:1001,30,0	1/1:24,0:23:14.96:303,15,0	1/1:22,0:22:9.01:120,9,0	1/1:21,0:21:24.08:1022,24,0	1/1:26,0:25:25.41:966,25,0	1/1:14,0:13:24.07:989,24,0	1/1:19,0:16:23.52:424,24,0	0/1:17,0:16:0.02:0,0,0	1/1:29,0:29:11.79:368,12,0	1/1:27,0:26:14.79:482,15,0	1/1:17,0:17:5.99:144,6,0	1/1:32,1:33:2.60:566,3,0	1/1:25,0:24:2.80:69,3,0	1/1:28,0:27:27.08:1038,27,0	1/1:10,0:10:11.44:509,11,0	1/1:3,0:13:9.03:246,9,0
chr10	93734609	.	TAGCCAA	T	785.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.305;DP=565;FS=5.766;HRun=0;HaplotypeScore=137.0209;InbreedingCoeff=0.9829;MQ=93.60;MQ0=0;MQRankSum=-5.631;QD=35.68;ReadPosRankSum=0.673;VQSLOD=2.9025;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:22:36.11:880,36,0	0/0:15,0:15:42.10:0,42,1426	0/0:36,0:36:83.31:0,83,3212	0/0:31,0:31:90.30:0,90,3040	0/0:19,0:19:51.12:0,51,1679	0/0:25,0:25:75.26:0,75,2674	0/0:21,0:21:60.21:0,60,2102	0/0:37,0:37:99:0,108,3554	0/0:15,0:15:45.15:0,45,1648	0/0:12,0:12:36.12:0,36,1294	0/0:5,0:5:15.05:0,15,496	0/0:24,0:24:57.20:0,57,2022	0/0:21,0:21:63.22:0,63,2181	0/0:27,0:27:81.28:0,81,2876	0/0:27,0:27:81.28:0,81,2890	0/0:23,0:23:69.24:0,69,2476	0/0:18,0:18:45.15:0,45,1541	0/0:14,0:14:39.13:0,39,1428	0/0:25,0:25:72.24:0,72,2480	0/0:14,0:14:33.11:0,33,1166	0/0:25,0:25:66.18:0,66,2189	0/0:13,0:13:36.12:0,36,1265	0/0:16,0:16:45.15:0,45,1592	0/0:23,0:23:57.59:0,58,1780	0/0:12,0:12:33.11:0,33,1195	0/0:19,0:19:54.19:0,54,1941	0/0:12,0:12:36.12:0,36,1318	0/0:14,0:14:30.08:0,30,1011
chr10	93735203	.	G	GA	1299.32	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=-6.668;DP=544;FS=0.685;HRun=1;HaplotypeScore=60.3934;InbreedingCoeff=0.9215;MQ=75.70;MQ0=0;MQRankSum=-0.831;QD=36.09;ReadPosRankSum=0.929;VQSLOD=3.8122;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:93.32:1394,93,0	0/0:8,0:8:21.07:0,21,273	0/0:11,0:11:27.03:0,27,329	0/0:14,0:14:30.05:0,30,349	0/0:8,0:8:24.06:0,24,297	0/0:8,0:8:18.06:0,18,234	0/0:32,0:32:90.22:0,90,1132	0/0:23,0:23:63.18:0,63,802	0/0:37,0:37:99:0,105,1331	0/0:14,0:14:42.14:0,42,542	0/0:7,0:7:18.06:0,18,234	0/0:30,0:30:90.28:0,90,1153	0/0:25,0:25:69.22:0,69,896	0/0:15,0:15:39.13:0,39,505	0/0:23,0:23:69.20:0,69,878	0/0:31,0:31:90.29:0,90,1165	0/0:36,0:36:99:0,102,1308	0/0:21,0:21:57.19:0,57,740	0/0:19,0:19:56.93:0,57,693	0/0:10,0:10:27.09:0,27,350	0/0:37,0:37:99:0,105,1363	0/0:3,0:3:9.03:0,9,116	0/0:10,0:10:24.08:0,24,310	0/0:31,0:31:87.20:0,87,1094	0/0:12,0:12:36.10:0,36,453	0/0:14,0:14:42.14:0,42,545	0/0:29,0:29:78.21:0,78,977	./.
chr10	93735277	.	GGTCGTCGTCGTC	G	7462.97	PASS	AB=1.000;AC=25;AF=0.463;AN=54;BaseQRankSum=-2.137;DP=522;FS=3.606;HRun=0;HaplotypeScore=202.7174;InbreedingCoeff=0.7824;MQ=69.44;MQ0=6;MQRankSum=-3.326;QD=28.70;ReadPosRankSum=4.610;VQSLOD=4.1686;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:24.08:0,24,1217	0/0:9,0:9:8.70:0,9,365	0/0:14,0:12:3.01:0,3,60	0/0:19,0:17:6.02:0,6,69	0/0:19,0:20:12.04:0,12,461	1/1:18,0:18:21.05:579,21,0	1/1:30,0:30:41.98:901,42,0	0/0:19,0:19:12:0,12,213	0/0:27,0:27:23.67:0,24,1189	0/0:15,0:15:21.07:0,21,612	0/0:15,0:15:12.04:0,12,435	1/1:25,0:25:33.09:892,33,0	1/1:14,0:14:18.06:624,18,0	1/1:21,0:21:45.09:1247,45,0	0/0:22,0:20:27.09:0,27,973	0/0:24,0:24:30.10:0,30,1283	1/1:36,0:36:21.07:545,21,0	0/0:31,0:31:27.09:0,27,1301	1/1:8,6:13:15.01:350,15,0	1/1:6,9:15:9.03:300,9,0	0/1:32,0:31:49.73:303,0,50	1/1:8,0:8:3.01:93,3,0	./.	1/1:20,0:20:34.36:1097,34,0	0/0:14,0:14:18.03:0,18,575	1/1:13,2:15:9.01:232,9,0	1/1:7,5:12:9.03:299,9,0	0/0:1,0:1:3.01:0,3,149
chr10	93735293	.	G	GTCA	2675.90	PASS	AB=0.747;AC=16;AF=0.286;AN=56;BaseQRankSum=-5.895;DP=481;FS=6.643;HRun=0;HaplotypeScore=160.2802;InbreedingCoeff=0.2278;MQ=53.52;MQ0=12;MQRankSum=0.348;QD=12.45;ReadPosRankSum=3.136;VQSLOD=2.5879;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:56.63:57,0,124	0/1:5,4:9:28.94:117,0,29	0/0:10,0:8:11.10:0,11,107	0/0:13,0:11:16.19:0,16,124	0/1:9,10:19:31.75:96,0,32	0/0:12,0:12:32.67:0,33,241	0/0:27,0:27:76.57:0,77,528	1/1:17,0:14:2.96:216,3,0	0/1:9,12:22:16.74:429,0,17	0/1:18,0:17:99:149,0,112	0/1:6,11:16:46.66:86,0,47	0/0:21,0:21:56.53:0,57,416	0/0:8,0:8:23.74:0,24,179	0/0:23,0:23:58.91:0,59,433	1/1:12,2:11:6.12:288,6,0	1/1:16,6:22:42.06:630,42,0	0/0:42,0:42:23.13:0,23,202	0/1:12,25:37:81.62:426,0,82	0/0:14,0:12:26.78:0,27,200	0/0:11,0:11:20.38:0,20,130	0/0:31,0:28:65.27:0,65,482	0/0:8,0:8:20.87:0,21,158	0/0:7,0:7:11.90:0,12,89	0/0:19,0:19:44.84:0,45,376	1/1:9,2:11:24.01:295,24,0	0/0:10,0:9:20.97:0,21,172	0/0:10,0:10:17.77:0,18,141	0/1:3,1:4:38.97:60,0,39
chr10	93735301	.	CGTCGTCGTCGTCGTCGTT	C	3153.66	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=2.170;DP=487;FS=0.000;HRun=0;HaplotypeScore=247.0335;InbreedingCoeff=0.0134;MQ=48.92;MQ0=13;MQRankSum=-1.731;QD=16.60;ReadPosRankSum=5.362;VQSLOD=1.8940;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:24.97:0,25,1798	0/0:7,0:7:17.98:0,18,753	0/0:10,0:7:17.94:0,18,286	0/0:8,0:7:15.04:0,15,371	0/0:18,0:18:38.79:0,39,927	0/1:15,0:15:99:246,0,133	0/1:29,0:29:99:539,0,401	0/0:18,0:15:36.07:0,36,934	0/0:24,0:24:50.27:0,50,2197	0/0:21,0:20:54.03:0,54,1650	0/0:20,0:19:36.34:0,36,1074	0/1:19,0:18:99:407,0,110	0/1:7,0:7:60.59:105,0,61	0/1:20,0:20:45.93:541,0,46	0/0:16,0:13:38.95:0,39,1600	0/0:18,0:18:33.10:0,33,1953	1/1:2,40:41:18.92:1037,19,0	0/0:38,0:38:68.96:0,69,2718	0/0:16,0:13:25.72:0,26,313	0/0:11,0:11:17.06:0,17,227	0/1:32,0:29:99:135,0,388	0/1:7,0:7:17.30:17,0,129	0/0:7,0:6:15.41:0,15,174	0/1:19,0:19:99:277,0,133	0/0:13,0:13:38.85:0,39,1069	0/0:9,0:8:11.07:0,11,226	0/0:10,0:10:13.81:0,14,84	0/0:6,0:6:18.04:0,18,478
chr10	93735303	.	TCG	T	491.51	PASS	AB=0.786;AC=8;AF=0.143;AN=56;BaseQRankSum=9.216;DP=496;FS=1.145;HRun=0;HaplotypeScore=152.9386;InbreedingCoeff=-0.1775;MQ=48.69;MQ0=13;MQRankSum=-7.093;QD=3.02;ReadPosRankSum=7.330;VQSLOD=2.1359;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:27.04:0,27,503	0/0:7,0:7:12.04:0,12,180	0/0:11,0:7:21.07:0,21,261	0/0:10,0:7:15.05:0,15,188	0/0:19,0:19:23.81:0,24,335	0/1:10,5:15:99:108,0,168	0/1:25,6:31:37.97:38,0,554	0/0:18,0:15:39.12:0,39,509	0/0:24,0:24:29.69:0,30,520	0/0:22,0:21:54.16:0,54,750	0/0:19,0:18:20.92:0,21,319	0/1:13,5:17:85.04:85,0,107	0/1:1,6:7:17.98:89,0,18	0/1:11,8:19:91.54:92,0,170	0/0:16,0:13:27.09:0,27,475	0/0:19,0:19:33.10:0,33,561	0/1:43,0:42:43.11:64,0,43	0/0:38,0:38:60.20:0,60,922	0/0:16,0:13:12.45:0,12,311	0/0:13,0:13:6.29:0,6,200	0/0:31,0:28:50.35:0,50,646	0/0:6,0:6:7.67:0,8,128	0/0:8,0:7:14.92:0,15,190	0/1:10,9:19:99:143,0,111	0/0:14,0:14:24.01:0,24,365	0/0:9,0:8:3.45:0,3,186	0/1:11,0:11:4.36:4,0,82	0/0:6,0:6:18.06:0,18,239
chr10	93735306	.	TCGTCGTCGTC	T	4350.97	PASS	AB=0.869;AC=13;AF=0.232;AN=56;BaseQRankSum=6.541;DP=508;FS=2.717;HRun=0;HaplotypeScore=194.0521;InbreedingCoeff=-0.1589;MQ=48.71;MQ0=12;MQRankSum=-4.395;QD=18.05;ReadPosRankSum=5.454;VQSLOD=3.9132;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:25.77:0,26,1101	0/0:7,0:7:17.46:0,17,408	0/0:10,0:7:18.06:0,18,286	0/0:11,0:7:15.05:0,15,276	0/0:18,0:18:37.21:0,37,569	0/1:8,5:13:60.46:368,0,60	0/1:26,6:32:99:474,0,219	0/0:18,0:15:38.64:0,39,681	0/0:27,0:27:58.02:0,58,1367	0/0:21,0:20:50.88:0,51,939	0/0:20,0:19:30.35:0,30,587	0/1:16,5:20:50.01:542,0,50	0/1:1,6:7:2.44:420,0,2	0/1:10,8:18:0.15:744,0,0	0/0:17,0:14:40.50:0,41,1071	0/0:19,0:19:30.10:0,30,1275	0/1:43,0:42:18.56:415,0,19	0/0:39,0:39:77.30:0,77,1744	0/1:15,0:12:99:141,0,240	0/1:13,0:13:99:144,0,189	0/1:29,0:26:6.34:6,0,332	0/1:7,0:7:49.35:122,0,49	0/0:10,0:9:18.16:0,18,108	0/1:11,9:20:63.04:740,0,63	0/0:14,0:14:33.67:0,34,733	0/1:10,0:9:93.09:93,0,245	0/1:13,0:13:99:140,0,218	0/0:7,0:7:20.57:0,21,261
chr10	93735316	.	C	CGTT	6127.97	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-1.919;DP=543;FS=3.242;HRun=0;HaplotypeScore=147.3221;InbreedingCoeff=0.8598;MQ=52.35;MQ0=7;MQRankSum=0.526;QD=15.83;ReadPosRankSum=-2.935;VQSLOD=4.4017;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,28:34:18.52:334,19,0	1/1:7,0:8:20.90:183,21,0	0/0:12,0:10:7.32:0,7,123	0/0:9,0:7:14.89:0,15,127	1/1:15,0:17:41.65:326,42,0	1/1:12,0:12:16.92:165,17,0	1/1:25,0:25:50.55:440,51,0	1/1:23,0:20:44.67:354,45,0	1/1:28,0:32:77.40:659,77,0	1/1:19,0:19:41.82:338,42,0	1/1:19,0:19:38.64:287,39,0	1/1:22,0:21:33.10:342,33,0	1/1:12,0:12:6.22:130,6,0	0/1:16,0:16:15.02:106,0,15	1/1:17,0:15:35.87:347,36,0	1/1:5,0:21:18.05:216,18,0	0/0:43,0:42:22.87:0,23,165	1/1:40,0:40:80.52:666,81,0	0/0:21,0:19:41.39:0,41,324	0/0:18,0:18:38.68:0,39,286	0/0:22,0:19:21.60:0,22,178	1/1:10,0:10:26.86:216,27,0	1/1:18,0:17:45.40:384,45,0	1/1:19,0:19:4.87:157,5,0	1/1:10,0:12:29.79:247,30,0	0/0:14,0:13:35.52:0,36,278	0/0:17,0:17:25.93:0,26,228	1/1:10,0:10:26.96:230,27,0
chr10	93735547	.	TAC	T	6812.38	PASS	AB=0.929;AC=28;AF=0.500;AN=56;BaseQRankSum=-8.021;DP=714;FS=3.654;HRun=0;HaplotypeScore=120.9460;InbreedingCoeff=0.7823;MQ=64.63;MQ0=7;MQRankSum=3.723;QD=16.38;ReadPosRankSum=4.318;VQSLOD=4.4789;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:41:25.36:0,25,140	0/0:4,0:5:3:0,3,26	0/1:37,0:20:15.61:16,0,185	0/0:44,1:30:21.07:0,21,319	0/0:5,0:10:11.03:0,11,83	1/1:7,14:22:29.47:355,29,0	1/1:10,18:29:44.97:499,45,0	0/0:19,0:27:51.04:0,51,532	0/0:13,0:32:41.98:0,42,369	0/0:10,0:18:29.36:0,29,250	0/0:3,0:7:6:0,6,53	1/1:7,16:28:56.45:576,56,0	1/1:7,17:24:44.03:498,44,0	1/1:4,10:14:21.06:242,21,0	0/0:14,0:31:54.01:0,54,509	0/0:5,0:21:28.78:0,29,243	1/1:5,22:30:68.70:735,69,0	0/0:11,0:33:54.88:0,55,487	0/1:15,3:18:75.52:88,0,76	1/1:4,3:7:5.97:69,6,0	1/1:28,42:73:92.72:1202,93,0	1/1:12,6:18:27.08:312,27,0	1/1:6,5:11:15.04:173,15,0	1/1:13,30:43:75.22:866,75,0	0/0:10,0:17:20.88:0,21,203	1/1:11,15:27:44.07:487,44,0	1/1:8,26:35:59.95:693,60,0	0/0:9,0:9:6:0,6,67
chr10	93735636	.	A	AC	466.69	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.635;DP=704;FS=8.346;HRun=2;HaplotypeScore=79.1920;InbreedingCoeff=0.9982;MQ=91.68;MQ0=0;MQRankSum=-0.750;QD=35.90;ReadPosRankSum=0.299;VQSLOD=3.7789;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,99,1207	0/0:9,0:9:27.08:0,27,334	0/0:28,0:28:81.23:0,81,984	0/0:32,0:32:80.63:0,81,910	0/0:19,0:19:54.15:0,54,649	0/0:28,0:28:69.22:0,69,854	0/0:24,0:24:69.22:0,69,854	0/0:25,0:25:72.23:0,72,892	0/0:25,0:25:66.21:0,66,818	0/0:29,0:29:84.25:0,84,1029	0/0:12,0:12:30.09:0,30,371	0/0:23,0:23:60.17:0,60,730	0/0:25,0:25:69.22:0,69,852	0/0:24,0:24:69.22:0,69,855	0/0:37,0:37:99:0,105,1300	0/0:22,0:22:54.14:0,54,669	0/0:32,0:32:90.28:0,90,1115	0/0:16,0:16:42.13:0,42,519	0/0:20,0:20:60.19:0,60,743	0/0:15,0:15:42.13:0,42,519	0/0:57,0:57:99:0,159,1938	1/1:0,13:13:39.13:562,39,0	0/0:18,0:18:48.15:0,48,591	0/0:44,0:44:99:0,117,1447	0/0:21,0:21:51.16:0,51,632	0/0:25,0:25:63.20:0,63,780	0/0:29,0:29:78.24:0,78,965	0/0:13,0:13:36.11:0,36,444
chr10	93736738	.	G	GA	408.74	PASS	AB=0.933;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.047;DP=503;FS=8.730;HRun=9;HaplotypeScore=64.0182;InbreedingCoeff=0.6274;MQ=73.64;MQ0=2;MQRankSum=-1.599;QD=12.77;ReadPosRankSum=-2.010;VQSLOD=2.3056;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:45.06:482,45,0	0/0:8,0:8:17.99:0,18,156	0/0:15,0:15:20.96:0,21,181	0/0:10,0:10:12.99:0,13,169	0/0:22,0:22:62.94:0,63,540	0/0:22,0:22:53.97:0,54,469	0/0:17,0:17:35.98:0,36,312	0/0:26,0:26:62.90:0,63,535	0/0:17,0:17:47.99:0,48,417	0/0:21,0:20:56.99:0,57,495	0/0:23,0:24:65.02:0,65,553	0/0:22,0:22:56.98:0,57,495	0/0:17,0:17:38.99:0,39,339	0/0:10,0:10:20.98:0,21,179	0/1:13,1:14:32.54:33,0,201	0/0:13,0:12:29.96:0,30,254	0/0:20,0:20:47.97:0,48,417	0/0:20,0:19:41.93:0,42,357	0/0:18,0:17:44.99:0,45,391	0/0:19,0:19:53.99:0,54,469	0/0:9,0:9:24:0,24,208	0/0:16,0:16:46.81:0,47,396	0/0:22,0:22:44.98:0,45,391	0/0:15,0:15:26.97:0,27,234	0/0:25,0:25:47.02:0,47,408	0/0:24,0:24:72:0,72,633	0/0:22,0:22:36.13:0,36,425	0/0:17,0:17:47.91:0,48,407
chr10	93736787	.	A	AATAT	7201.05	PASS	AB=0.750;AC=25;AF=0.446;AN=56;BaseQRankSum=-0.017;DP=408;FS=0.000;HRun=0;HaplotypeScore=104.8782;InbreedingCoeff=0.8745;MQ=66.06;MQ0=5;MQRankSum=-7.608;QD=38.30;ReadPosRankSum=-2.401;VQSLOD=3.9446;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:12:6.02:90,6,0	1/1:1,5:6:15.05:377,15,0	0/0:16,0:14:7.29:0,7,336	0/0:20,0:13:9.57:0,10,192	1/1:9,6:15:27.08:577,27,0	0/0:18,0:18:25.40:0,25,606	0/0:17,0:17:45.07:0,45,699	1/1:23,11:33:57.02:1191,57,0	1/1:9,5:14:21.07:475,21,0	0/1:8,4:11:21.79:563,0,22	1/1:13,4:17:24.05:447,24,0	0/0:21,0:21:36.12:0,36,598	0/0:11,0:11:15.05:0,15,259	0/0:13,0:13:27.09:0,27,458	1/1:5,5:10:21.07:488,21,0	1/1:4,3:6:15.04:323,15,0	1/1:9,1:13:20.08:293,20,0	1/1:7,9:15:36.08:813,36,0	0/0:14,0:13:33.11:0,33,554	0/0:17,0:17:27.05:0,27,415	0/0:6,0:6:12.04:0,12,206	0/0:11,0:11:21.06:0,21,332	0/0:15,0:15:27.08:0,27,419	0/0:7,0:7:12:0,12,175	1/1:4,13:18:35.91:821,36,0	0/0:19,0:20:44.84:0,45,841	0/0:14,0:14:15.05:0,15,259	1/1:8,6:14:33.11:743,33,0
chr10	93736799	.	T	TA	851.36	PASS	AB=0.984;AC=16;AF=0.286;AN=56;BaseQRankSum=4.513;DP=398;FS=2.764;HRun=1;HaplotypeScore=117.9315;InbreedingCoeff=0.2827;MQ=56.38;MQ0=11;MQRankSum=-5.553;QD=5.35;ReadPosRankSum=-1.253;VQSLOD=-0.0142;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:8.88:0,9,75	0/1:6,0:6:5.71:31,0,6	0/0:26,0:17:39.96:0,40,460	0/0:28,0:11:17.41:0,17,182	0/1:12,1:13:14.70:90,0,15	0/0:17,0:17:39.73:0,40,538	0/0:17,0:17:48.12:0,48,646	0/1:24,0:22:65.69:66,0,359	0/1:12,0:12:37.73:55,0,38	0/1:15,0:14:88.87:89,0,129	1/1:12,1:13:4.77:158,5,0	0/0:22,0:22:42.07:0,42,541	0/0:11,0:11:20.76:0,21,241	0/0:10,0:10:23.18:0,23,371	1/1:10,0:10:15.52:87,16,0	0/1:10,0:9:20.78:21,0,83	1/1:9,3:12:19.26:104,19,0	0/1:15,1:15:99:118,0,103	0/0:14,0:13:36.12:0,36,494	0/0:14,0:14:30.06:0,30,393	0/0:8,0:8:15.04:0,15,194	0/0:11,0:11:26.98:0,27,320	0/0:12,0:12:23.18:0,23,348	0/0:6,0:6:12:0,12,146	1/1:16,0:16:28.22:99,28,0	0/0:21,0:21:48:0,48,680	0/0:15,0:15:21.07:0,21,280	0/1:12,0:12:16.18:111,0,16
chr10	93736810	.	C	CTGTGTGTGTGTGTG	13546.95	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-0.126;DP=498;FS=19.991;HRun=0;HaplotypeScore=190.2150;InbreedingCoeff=0.6918;MQ=46.81;MQ0=25;MQRankSum=-3.284;QD=35.46;ReadPosRankSum=3.529;VQSLOD=2.9690;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:8:3.23:0,3,235	1/1:4,0:6:12.04:173,12,0	0/0:63,0:21:23.25:0,23,449	0/0:45,0:14:23.11:0,23,322	1/1:8,0:13:12.04:279,12,0	1/1:20,0:22:45.48:981,45,0	1/1:19,0:23:33.06:690,33,0	1/1:31,0:27:48.63:1089,49,0	1/1:6,0:13:15.05:384,15,0	1/1:13,0:19:39.13:1052,39,0	1/1:5,0:10:6.02:140,6,0	1/1:16,0:17:0.35:374,0,0	1/1:12,0:11:9.01:267,9,0	1/1:11,0:18:38.32:578,38,0	1/1:4,0:8:15.05:516,15,0	1/1:5,0:11:24.08:762,24,0	1/1:6,0:12:9.03:157,9,0	1/1:11,0:15:24.08:660,24,0	1/1:13,0:12:21.07:485,21,0	1/1:9,5:15:12.04:579,12,0	1/1:11,0:10:12.04:236,12,0	1/1:9,0:8:8.92:371,9,0	1/1:10,0:14:15.49:163,15,0	1/1:10,0:11:6.02:215,6,0	1/1:15,0:16:12.03:204,12,0	1/1:12,15:28:51.07:1491,51,0	1/1:12,9:22:24.08:1220,24,0	1/1:7,0:10:24.06:480,24,0
chr10	93736814	.	G	GTGTGTGTGTGTGTGTGTGTGT	12869.92	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=0.501;DP=523;FS=16.001;HRun=0;HaplotypeScore=243.8568;InbreedingCoeff=0.1604;MQ=45.48;MQ0=25;MQRankSum=-4.757;QD=32.26;ReadPosRankSum=3.915;VQSLOD=2.1694;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:10.17:0,10,601	1/1:6,0:6:4.36:43,4,0	0/0:68,0:23:26.45:0,26,594	0/0:46,0:13:22.88:0,23,378	0/1:15,0:15:11.38:186,0,11	1/1:16,0:23:54.10:1739,54,0	1/1:16,0:23:44.98:1288,45,0	1/1:31,0:27:14.23:750,14,0	0/1:14,0:14:9.51:169,0,10	1/1:19,0:19:3.02:725,3,0	1/1:9,0:9:2.50:49,2,0	1/1:6,8:21:15.52:766,16,0	1/1:8,3:14:15.01:695,15,0	1/1:13,0:17:41.89:1294,42,0	0/1:11,0:10:19.30:234,0,19	1/1:11,0:11:23.42:332,23,0	1/1:11,0:11:12.29:90,12,0	1/1:15,0:14:9.97:381,10,0	0/1:17,0:16:70.71:341,0,71	0/1:13,0:13:31.59:331,0,32	0/1:11,0:10:20.10:22,0,20	1/1:3,4:16:9.03:626,9,0	1/1:6,0:14:22.23:395,22,0	1/1:4,0:11:6.49:273,6,0	0/1:16,0:16:6.95:53,0,7	0/1:28,0:28:96.46:894,0,96	1/1:21,0:21:24.03:769,24,0	1/1:9,0:9:23.09:423,23,0
chr10	93736828	.	GT	G	1369.30	PASS	AB=0.913;AC=20;AF=0.357;AN=56;BaseQRankSum=3.546;DP=535;FS=12.914;HRun=2;HaplotypeScore=115.8159;InbreedingCoeff=-0.4836;MQ=48.20;MQ0=30;MQRankSum=-3.730;QD=4.23;ReadPosRankSum=0.056;VQSLOD=-0.6927;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:18.10:0,18,289	0/1:5,0:5:4.03:85,0,4	0/0:77,0:19:48.11:0,48,604	0/0:54,1:20:53.11:0,53,592	0/1:11,1:11:14.87:15,0,116	0/1:17,4:21:99:244,0,306	0/1:24,2:25:99:147,0,358	0/1:21,8:24:99:174,0,575	0/1:12,1:13:57.05:57,0,68	0/1:15,0:15:89.99:90,0,307	0/1:9,0:9:21.78:22,0,100	0/0:20,0:20:16.17:0,16,173	0/0:10,0:9:9.89:0,10,135	0/1:17,2:19:99:108,0,240	0/0:11,0:10:23.37:0,23,195	0/0:11,0:11:9.90:0,10,117	0/1:13,0:13:2.97:3,0,132	0/1:14,1:13:12:12,0,243	0/1:14,5:18:99:108,0,363	0/1:15,0:15:0.05:0,0,200	0/1:7,8:13:99:105,0,136	0/0:14,0:13:11.78:0,12,92	0/1:15,1:16:94.83:95,0,168	0/1:17,1:18:8.13:8,0,329	0/1:11,3:14:51.80:52,0,138	0/1:22,1:23:99:137,0,394	0/1:18,0:18:7.45:7,0,231	0/1:8,1:9:52.83:53,0,83
chr10	93736829	.	T	TG	2067.03	PASS	AB=0.909;AC=27;AF=0.482;AN=56;BaseQRankSum=11.019;DP=525;FS=6.795;HRun=1;HaplotypeScore=111.2461;InbreedingCoeff=-0.7568;MQ=48.62;MQ0=29;MQRankSum=-6.025;QD=5.23;ReadPosRankSum=5.356;VQSLOD=0.6124;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:5.78:6,0,176	1/1:2,3:5:11.52:129,12,0	0/0:77,0:19:48.02:0,48,583	0/0:52,0:20:51.46:0,51,570	0/1:9,2:10:55.71:56,0,59	0/1:18,3:21:99:274,0,296	0/1:24,1:25:99:182,0,340	0/1:27,2:24:99:195,0,532	0/1:10,3:13:23.22:88,0,23	0/1:11,4:15:99:192,0,221	0/1:8,1:9:31.83:32,0,85	0/1:19,1:20:31.24:31,0,118	0/1:8,2:9:37.96:38,0,106	0/1:18,1:19:99:172,0,228	0/1:9,0:9:28.40:28,0,98	0/1:9,1:10:16.51:75,0,17	0/1:11,1:12:46.92:47,0,92	0/1:14,1:13:84.21:84,0,184	0/1:17,1:17:44.79:45,0,350	0/1:17,0:17:33.92:34,0,161	0/1:13,1:12:99:100,0,137	0/1:14,0:13:6.38:6,0,49	0/1:15,1:16:99:120,0,165	0/1:16,1:17:8.66:9,0,329	0/1:10,3:13:67.96:68,0,96	0/1:23,0:23:41.72:42,0,333	0/1:16,2:18:29.47:29,0,214	0/1:6,3:9:35.52:141,0,36
chr10	93736962	.	G	GAAA	880.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.048;DP=514;FS=10.197;HRun=7;HaplotypeScore=68.2292;InbreedingCoeff=0.7988;MQ=63.51;MQ0=4;MQRankSum=-0.245;QD=38.28;ReadPosRankSum=0.191;VQSLOD=1.8715;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:22:48.16:975,48,0	0/0:11,0:11:30.09:0,30,439	0/0:28,0:15:39.07:0,39,515	0/0:34,0:18:0.76:0,1,422	0/0:17,0:17:39.13:0,39,594	0/0:13,0:13:39.12:0,39,574	0/0:19,0:19:51.14:0,51,737	0/0:26,0:25:72.22:0,72,1057	0/0:17,0:17:51.13:0,51,708	0/0:18,0:18:51.17:0,51,778	0/0:11,0:11:30.07:0,30,410	0/0:20,0:20:57.19:0,57,870	0/0:10,0:10:30.10:0,30,450	0/0:14,0:14:42.14:0,42,623	0/0:11,0:11:33.11:0,33,492	0/0:14,0:14:42.09:0,42,579	0/0:33,0:33:90.24:0,90,1324	0/0:21,0:21:57.07:0,57,774	0/0:13,0:13:36.08:0,36,509	0/0:19,0:19:57.06:0,57,797	0/0:14,0:14:39.11:0,39,561	0/0:7,0:7:18.05:0,18,255	0/0:25,0:25:69.22:0,69,1009	0/0:32,0:32:93.23:0,93,1382	0/0:15,0:15:42.14:0,42,632	0/0:18,0:18:51.06:0,51,738	0/0:18,0:18:54.13:0,54,749	0/0:12,0:12:36.09:0,36,500
chr10	93738157	.	T	TA	665.33	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.732;DP=616;FS=4.199;HRun=7;HaplotypeScore=58.0227;InbreedingCoeff=0.9756;MQ=70.38;MQ0=0;MQRankSum=-2.643;QD=25.59;ReadPosRankSum=1.095;VQSLOD=4.4323;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:63.19:760,63,0	0/0:6,0:6:18.03:0,18,174	0/0:11,0:9:19.75:0,20,152	0/0:11,0:11:16.87:0,17,135	0/0:31,0:31:78.05:0,78,732	0/0:25,0:25:72.06:0,72,685	0/0:23,0:23:63.05:0,63,587	0/0:23,0:23:69.01:0,69,633	0/0:19,0:19:51.05:0,51,478	0/0:28,0:28:75.05:0,75,707	0/0:20,0:20:60.05:0,60,564	0/0:24,0:24:60.09:0,60,579	0/0:29,0:29:84.10:0,84,799	0/0:24,0:24:54.07:0,54,520	0/0:25,0:25:72.11:0,72,691	0/0:20,0:20:51.07:0,51,488	0/0:23,0:23:57.07:0,57,545	0/0:20,0:20:48.08:0,48,462	0/0:22,0:22:54.06:0,54,512	0/0:25,0:25:63.05:0,63,590	0/0:20,0:20:42.06:0,42,405	0/0:20,0:20:51.08:0,51,492	0/0:34,0:34:87.11:0,87,827	0/0:19,0:19:51.08:0,51,492	0/0:19,0:19:51.04:0,51,480	0/0:28,0:28:81.11:0,81,773	0/0:27,0:27:72.11:0,72,694	0/0:14,0:14:27.04:0,27,260
chr10	93738831	.	CT	C	494.89	PASS	AB=0.900;AC=18;AF=0.321;AN=56;BaseQRankSum=-0.523;DP=331;FS=22.537;HRun=13;HaplotypeScore=53.2597;InbreedingCoeff=0.1637;MQ=72.16;MQ0=5;MQRankSum=0.533;QD=3.19;ReadPosRankSum=3.734;VQSLOD=-0.7061;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:10,10:20:17.56:206,0,18	0/0:2,0:2:5.80:0,6,41	0/0:19,0:15:11.95:0,12,93	0/1:19,0:12:0.59:1,0,42	0/0:13,0:13:17.25:0,17,128	1/1:6,1:7:11.82:79,12,0	1/1:6,8:14:28.82:203,29,0	0/0:20,1:21:2.08:0,2,167	0/1:13,0:14:4.86:5,0,122	0/0:14,0:13:3.04:0,3,172	0/0:7,0:7:3:0,3,29	1/1:5,2:7:2.96:22,3,0	0/0:5,0:5:0:0,0,0	0/1:5,0:5:15.85:16,0,23	0/1:14,1:15:14.03:14,0,152	0/0:13,1:14:23.39:0,23,206	0/1:19,1:19:4.57:5,0,200	0/0:10,0:10:6.01:0,6,58	0/0:14,0:13:6.01:0,6,58	0/0:11,0:12:10.82:0,11,67	0/0:13,1:16:11.85:0,12,102	1/1:5,1:6:2.97:22,3,0	1/1:5,2:7:5.92:44,6,0	0/0:4,1:5:3.46:0,3,25	0/0:11,0:11:5.96:0,6,48	0/0:13,0:13:12.02:0,12,117	0/1:11,2:11:22.82:23,0,116	0/1:4,1:5:13.06:13,0,35
chr10	93738847	.	TTC	T	40.85	PASS	AB=0.947;AC=12;AF=0.214;AN=56;BaseQRankSum=1.492;DP=306;FS=2.425;HRun=0;HaplotypeScore=45.7266;InbreedingCoeff=-0.0743;MQ=45.89;MQ0=12;MQRankSum=-3.885;QD=0.33;ReadPosRankSum=0.784;VQSLOD=1.1541;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:15:24.75:0,25,197	1/1:3,0:3:5.74:17,6,0	0/0:6,0:2:2.37:0,2,8	0/1:12,0:5:4.16:4,0,5	0/0:18,0:17:3.01:0,3,78	0/1:5,0:5:0.23:0,0,85	0/0:23,0:22:33.96:0,34,420	0/1:20,0:20:14.39:14,0,189	0/1:15,1:16:24.06:24,0,116	0/0:12,0:11:26.72:0,27,235	0/1:10,0:10:12.18:12,0,36	0/0:3,0:3:5.40:0,5,25	0/0:10,0:10:14.82:0,15,142	0/0:8,0:8:9.49:0,9,85	0/0:14,0:14:11.41:0,11,144	0/1:12,1:13:5.15:5,0,165	0/1:19,0:17:21.92:22,0,132	0/0:6,0:6:7.76:0,8,56	0/1:6,2:7:27.08:27,0,88	0/0:11,0:10:11.73:0,12,131	0/0:12,0:10:14.65:0,15,146	0/0:6,0:6:11.10:0,11,69	0/0:9,0:9:9.26:0,9,140	0/1:8,0:8:8.68:9,0,37	0/1:6,2:8:34.65:42,0,35	0/0:9,0:9:22.81:0,23,151	0/0:15,0:13:11.96:0,12,144	0/0:5,0:4:8.97:0,9,71
chr10	93739310	.	ACGCGCG	A	2856.13	PASS	AC=42;AF=0.913;AN=46;BaseQRankSum=1.451;DP=475;FS=0.000;HRun=0;HaplotypeScore=118.0027;InbreedingCoeff=0.2840;MQ=72.90;MQ0=13;MQRankSum=-0.064;QD=7.83;ReadPosRankSum=3.120;VQSLOD=1.7839;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,29:39:2.85:63,3,0	./.	1/1:22,0:12:0.47:1,0,0	0/0:24,0:13:3.53:0,4,33	1/1:14,0:14:3.01:53,3,0	1/1:21,0:21:5.84:87,6,0	1/1:34,0:33:3.01:43,3,0	1/1:14,9:23:21.65:462,22,0	1/1:13,0:13:9.03:159,9,0	1/1:10,1:10:18.06:345,18,0	./.	1/1:21,0:21:11.71:159,12,0	1/1:12,0:12:3.01:43,3,0	1/1:17,0:17:8.97:140,9,0	./.	1/1:12,0:12:6.02:106,6,0	1/1:22,0:26:27.64:257,28,0	1/1:18,0:17:6.02:106,6,0	1/1:3,0:6:9.03:161,9,0	1/1:5,0:8:0.64:2,1,0	./.	0/0:12,0:10:0.31:0,0,1	1/1:11,0:12:3.01:42,3,0	1/1:27,0:23:5.99:96,6,0	./.	1/1:3,0:12:24.97:411,25,0	1/1:3,0:8:9.03:158,9,0	1/1:7,0:5:3.01:53,3,0
chr10	93739320	.	GCGCGCGCGCGCA	G	3552.03	PASS	AB=1.000;AC=31;AF=0.620;AN=50;BaseQRankSum=7.036;DP=455;FS=1.709;HRun=0;HaplotypeScore=120.0417;InbreedingCoeff=-0.0044;MQ=60.72;MQ0=23;MQRankSum=-3.663;QD=11.13;ReadPosRankSum=6.126;VQSLOD=1.9457;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:17.82:0,18,223	./.	1/1:15,0:5:0.89:2,1,0	0/0:20,0:9:3.52:0,4,36	1/1:15,0:14:3:28,3,0	1/1:22,0:22:6.02:194,6,0	0/1:39,0:36:19.37:96,0,19	0/1:19,0:19:68.09:160,0,68	1/1:13,0:13:9.03:178,9,0	0/1:15,0:12:28.74:213,0,29	./.	1/1:16,0:16:11.40:258,11,0	0/1:12,0:12:9.97:126,0,10	0/1:20,0:19:13.80:264,0,14	0/0:17,0:16:5.99:0,6,50	0/1:11,0:11:40.92:121,0,41	0/1:27,0:27:67.49:67,0,127	0/1:21,0:18:62.25:115,0,62	1/1:3,0:3:9.03:273,9,0	1/1:6,0:5:2.35:49,2,0	./.	0/0:12,0:9:0.45:0,0,1	1/1:4,7:10:3.27:116,3,0	0/1:30,0:25:37.81:163,0,38	0/0:15,0:14:11.90:0,12,84	1/1:12,0:11:27.09:794,27,0	1/1:5,0:5:9.03:270,9,0	1/1:7,0:4:3.01:66,3,0
chr10	93739322	.	GCGCGCGCGCACA	G	4041.72	PASS	AB=1.000;AC=38;AF=0.826;AN=46;BaseQRankSum=4.964;DP=453;FS=4.406;HRun=0;HaplotypeScore=113.9009;InbreedingCoeff=0.2260;MQ=59.05;MQ0=23;MQRankSum=-1.523;QD=12.95;ReadPosRankSum=3.665;VQSLOD=1.6295;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:40:14.98:0,15,210	./.	1/1:13,0:4:0.89:2,1,0	0/0:19,0:8:2.99:0,3,27	1/1:15,0:14:3.01:40,3,0	1/1:1,21:22:6.02:230,6,0	1/1:12,24:34:2.61:114,3,0	1/1:16,0:16:3.65:304,4,0	1/1:12,0:12:9.03:231,9,0	1/1:15,0:12:8.86:344,9,0	./.	1/1:4,10:14:12.03:325,12,0	1/1:2,10:12:6.02:171,6,0	1/1:3,16:19:7.21:316,7,0	./.	0/1:10,0:10:15.96:151,0,16	1/1:28,0:28:4.51:195,5,0	0/1:21,0:18:25.26:145,0,25	1/1:5,0:5:11.78:231,12,0	1/1:8,0:7:2.60:24,3,0	./.	0/0:4,9:10:0.45:0,0,1	1/1:11,0:10:3.27:99,3,0	1/1:9,19:23:6.15:204,6,0	./.	1/1:12,0:11:27.03:620,27,0	1/1:7,0:7:9.03:214,9,0	1/1:6,0:3:3.01:80,3,0
chr10	93739324	.	GCGCGCGCACACACACACACACA	G	3621.97	PASS	AB=1.000;AC=23;AF=0.500;AN=46;BaseQRankSum=-1.899;DP=444;FS=7.837;HRun=0;HaplotypeScore=136.7113;InbreedingCoeff=0.3738;MQ=57.96;MQ0=23;MQRankSum=1.246;QD=21.56;ReadPosRankSum=0.330;VQSLOD=2.0754;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:12.04:0,12,727	./.	1/1:11,0:3:0.47:1,0,0	0/0:18,0:7:2.34:0,2,31	1/1:2,13:15:3.01:71,3,0	0/0:22,0:22:5.61:0,6,100	0/0:37,0:34:4.37:0,4,54	1/1:15,0:15:20.63:461,21,0	1/1:1,11:12:9.03:555,9,0	1/1:5,1:11:20.95:774,21,0	./.	0/0:11,0:12:12.04:0,12,250	0/0:11,0:11:6.02:0,6,151	0/0:19,0:19:9.50:0,10,181	./.	1/1:3,7:10:6.02:370,6,0	1/1:27,0:27:4.58:563,5,0	1/1:5,16:18:8.95:403,9,0	0/1:7,0:7:91.57:92,0,123	1/1:9,0:8:0.74:2,1,0	./.	0/0:13,0:10:0.26:0,0,0	0/0:11,0:10:2.33:0,2,66	0/0:28,0:23:6.09:0,6,102	./.	0/1:12,0:11:99:123,0,240	0/1:7,0:7:44.73:45,0,53	1/1:3,0:4:3.01:164,3,0
chr10	93739359	.	CACACACACACACACAA	C	1809.37	PASS	AB=1.000;AC=10;AF=0.185;AN=54;BaseQRankSum=3.837;DP=537;FS=7.339;HRun=0;HaplotypeScore=183.1069;InbreedingCoeff=-0.0347;MQ=50.95;MQ0=31;MQRankSum=-0.588;QD=10.40;ReadPosRankSum=2.885;VQSLOD=1.9486;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:72.86:0,73,2166	0/0:4,0:3:5.95:0,6,42	0/0:13,0:6:18.04:0,18,319	0/0:12,0:11:32.93:0,33,503	0/0:22,0:21:32.74:0,33,240	0/0:31,0:31:33.47:0,33,764	0/0:39,0:35:35.85:0,36,648	0/0:15,0:15:42.98:0,43,354	0/1:19,0:18:99:271,0,125	0/1:18,0:15:99:277,0,124	0/0:9,0:9:14.87:0,15,108	0/0:17,0:17:27.51:0,28,614	0/0:10,0:9:18.04:0,18,336	0/0:22,0:21:26.15:0,26,424	0/0:19,0:18:26.86:0,27,213	0/1:8,0:8:59.90:185,0,60	1/1:2,21:23:8.16:553,8,0	0/1:23,0:20:99:167,0,211	0/1:22,0:22:99:201,0,356	./.	0/1:32,0:29:99:137,0,254	0/0:17,0:15:20.95:0,21,319	0/0:14,0:13:15.03:0,15,285	0/0:30,0:25:18.04:0,18,318	0/0:13,0:13:8.90:0,9,60	0/1:22,0:21:82.98:83,0,544	0/0:16,0:14:7.32:0,7,54	0/1:7,0:4:43.96:81,0,44
chr10	93739369	.	CACACAA	C	1323.47	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=5.477;DP=529;FS=16.808;HRun=0;HaplotypeScore=133.6400;InbreedingCoeff=0.4066;MQ=55.99;MQ0=21;MQRankSum=-1.980;QD=8.02;ReadPosRankSum=4.213;VQSLOD=1.4668;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:80.32:0,80,1000	0/0:3,0:3:8.95:0,9,69	0/0:16,0:9:20.21:0,20,241	0/0:16,0:15:41.91:0,42,425	0/0:19,0:19:38.70:0,39,286	0/0:27,0:27:7.12:0,7,267	0/0:40,0:36:35:0,35,338	0/0:20,0:20:57.85:0,58,516	0/1:19,0:18:32.88:33,0,149	0/1:21,0:18:20.95:21,0,243	0/0:10,0:10:20.88:0,21,164	0/0:20,0:20:12.80:0,13,248	0/0:9,0:9:1.89:0,2,108	0/1:19,0:18:15.74:16,0,104	0/0:18,0:17:29.86:0,30,241	0/1:9,0:9:25.87:26,0,85	1/1:22,0:21:14.43:230,14,0	0/0:23,0:20:5.87:0,6,260	1/1:2,18:20:54.79:534,55,0	./.	1/1:31,0:28:50.14:371,50,0	0/0:17,0:16:24.43:0,24,224	0/0:13,0:13:19.56:0,20,165	0/0:28,0:25:7.26:0,7,141	0/0:12,0:12:14.91:0,15,116	1/1:17,0:17:22.18:253,22,0	0/0:14,1:14:1.77:0,2,4	0/1:7,0:5:7.91:8,0,68
chr10	93739371	.	CACAA	C	1298.42	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=5.200;DP=515;FS=13.265;HRun=0;HaplotypeScore=121.8251;InbreedingCoeff=0.5450;MQ=57.81;MQ0=18;MQRankSum=-2.293;QD=9.62;ReadPosRankSum=3.500;VQSLOD=2.3080;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:59.63:0,60,814	0/0:3,0:3:8.95:0,9,69	0/0:17,0:10:23.21:0,23,272	0/0:16,0:15:41.91:0,42,425	0/0:19,0:19:38.70:0,39,286	0/0:24,0:24:4.57:0,5,218	0/0:35,0:31:34.69:0,35,361	0/0:21,0:21:60.44:0,60,545	0/0:20,0:19:9.80:0,10,184	0/0:21,0:19:22.11:0,22,293	0/0:10,0:10:20.88:0,21,164	0/1:20,0:20:8.51:9,0,207	0/1:8,0:8:11.58:12,0,83	0/1:19,0:18:12.52:13,0,107	0/0:17,0:17:29.86:0,30,241	0/0:9,0:9:0.75:0,1,87	1/1:22,0:21:14.67:173,15,0	0/0:23,0:20:31.71:0,32,288	1/1:20,0:20:56.86:498,57,0	./.	1/1:30,0:27:53.13:420,53,0	0/0:16,0:15:27.39:0,27,227	0/0:11,0:11:16.78:0,17,139	0/0:28,0:25:8.02:0,8,166	0/0:12,0:12:14.91:0,15,116	1/1:14,2:16:34.65:336,35,0	0/0:4,11:14:0.47:0,0,1	0/0:7,0:5:5.11:0,5,74
chr10	93742929	.	TGTGTGTGTGTGTGTGTGTGTGTGTTC	T	5623.01	PASS	AB=0.984;AC=11;AF=0.196;AN=56;BaseQRankSum=8.159;DP=610;FS=22.441;HRun=0;HaplotypeScore=330.3271;InbreedingCoeff=-0.0464;MQ=51.11;MQ0=12;MQRankSum=-4.544;QD=25.91;ReadPosRankSum=4.814;VQSLOD=2.1328;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:32.44:0,32,1136	0/1:12,1:13:53.43:482,0,53	0/0:13,0:6:12.04:0,12,394	0/0:26,0:11:24.02:0,24,635	0/1:25,1:26:88.46:377,0,88	0/0:16,0:16:18.53:0,19,679	0/0:21,0:21:30.37:0,30,1023	0/1:16,0:16:18.67:19,0,237	0/1:22,0:22:99:946,0,111	0/1:22,0:22:75.82:831,0,76	0/1:21,0:21:68.93:283,0,69	0/0:17,0:17:24.08:0,24,906	0/0:19,0:19:35.14:0,35,1550	0/0:23,0:23:42.14:0,42,1326	0/1:32,0:31:39.28:1033,0,39	0/1:26,1:27:84.44:725,0,84	0/0:32,0:32:78.43:0,78,4010	0/1:21,0:21:99:115,0,201	0/0:19,0:15:39.10:0,39,2312	0/0:18,0:18:12.03:0,12,752	0/0:33,0:31:50.73:0,51,3299	0/0:23,0:23:26.48:0,26,776	0/0:13,0:13:11.44:0,11,262	0/0:27,0:27:23.77:0,24,879	1/1:14,3:17:15.05:812,15,0	0/0:28,0:27:75.26:0,75,4982	0/0:18,0:18:27.04:0,27,2152	0/0:3,0:3:3.01:0,3,38
chr10	93742931	.	TGTGTGTGTGTGTGTGTGTGTGTTC	T	7656.35	PASS	AB=0.893;AC=21;AF=0.389;AN=54;BaseQRankSum=6.704;DP=604;FS=14.634;HRun=0;HaplotypeScore=304.2965;InbreedingCoeff=0.6811;MQ=52.32;MQ0=12;MQRankSum=-3.486;QD=26.31;ReadPosRankSum=2.531;VQSLOD=2.2284;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:42:11.84:12,0,749	1/1:4,9:13:12:575,12,0	0/0:13,0:7:3.08:0,3,309	0/0:25,0:11:27.09:0,27,587	1/1:9,16:25:20.94:566,21,0	0/0:16,0:16:18.52:0,19,509	0/0:21,0:21:30.33:0,30,729	1/1:20,0:20:19.73:370,20,0	1/1:8,13:21:21.07:1283,21,0	1/1:7,14:21:33.70:1096,34,0	1/1:12,9:21:6.02:391,6,0	0/0:17,0:17:24.06:0,24,653	0/0:19,0:19:32.59:0,33,1183	0/0:23,0:23:42.07:0,42,932	1/1:15,16:30:24.55:1411,25,0	1/1:9,18:27:15.52:900,16,0	0/0:32,0:32:77.18:0,77,3377	0/1:10,9:19:83.52:189,0,84	0/0:18,0:15:35.71:0,36,2023	0/0:18,0:18:9.03:0,9,648	0/1:34,0:32:63.09:63,0,2796	0/0:22,0:22:23.77:0,24,522	0/0:13,0:13:11.81:0,12,164	0/0:27,0:27:23.46:0,23,661	1/1:9,8:17:15.05:802,15,0	0/0:28,0:27:71.01:0,71,4276	0/0:18,0:18:3.63:0,4,1811	./.
chr10	93742939	.	TGTGTGTGTGTGTGTTC	T	7126.91	PASS	AB=1.000;AC=36;AF=0.667;AN=54;BaseQRankSum=6.369;DP=524;FS=15.444;HRun=0;HaplotypeScore=204.7638;InbreedingCoeff=-0.0924;MQ=55.59;MQ0=11;MQRankSum=-1.924;QD=15.33;ReadPosRankSum=2.522;VQSLOD=2.8007;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,22:40:9.01:268,9,0	1/1:10,0:10:9.03:347,9,0	0/0:14,0:6:6.08:0,6,181	0/0:23,0:14:31.73:0,32,635	1/1:17,0:17:12.04:249,12,0	0/1:17,0:17:18.98:74,0,19	0/1:24,0:24:37.65:148,0,38	1/1:14,0:14:37.38:581,37,0	1/1:14,0:14:21.07:811,21,0	1/1:14,0:14:34.23:725,34,0	1/1:9,0:9:6.02:239,6,0	0/1:17,0:17:68.37:68,0,82	0/1:21,0:21:57.45:325,0,57	0/1:21,0:21:45.27:372,0,45	1/1:18,0:17:24.55:803,25,0	1/1:19,0:19:15.52:540,16,0	0/1:31,0:31:99:119,0,1054	1/1:13,0:13:2.83:144,3,0	0/1:16,0:14:24.72:25,0,985	0/0:18,0:18:9.03:0,9,344	0/1:30,0:29:99:118,0,1361	0/1:24,0:24:14.94:152,0,15	1/1:14,0:14:5.54:161,6,0	0/1:28,0:28:37.34:73,0,37	1/1:11,0:11:15.05:483,15,0	0/1:27,0:26:99:173,0,2196	0/1:16,0:16:99:128,0,753	./.
chr10	93742941	.	TGTGTGTGTGTGTTC	T	7651.56	PASS	AB=0.994;AC=43;AF=0.796;AN=54;BaseQRankSum=4.408;DP=512;FS=7.089;HRun=0;HaplotypeScore=187.9743;InbreedingCoeff=0.2321;MQ=56.05;MQ0=11;MQRankSum=-2.814;QD=16.97;ReadPosRankSum=1.795;VQSLOD=2.9431;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:8.76:207,9,0	1/1:10,0:10:9.03:305,9,0	0/0:16,0:8:12.09:0,12,269	0/0:24,0:15:31.60:0,32,602	1/1:17,0:17:12.04:207,12,0	1/1:5,11:16:2.97:125,3,0	1/1:8,15:23:4.73:248,5,0	1/1:15,0:15:40.57:628,41,0	1/1:14,0:14:21.07:714,21,0	1/1:14,0:14:32.91:680,33,0	1/1:9,0:9:6.02:211,6,0	1/1:9,7:16:3:125,3,0	1/1:18,0:18:30.01:423,30,0	1/1:9,11:20:15.05:618,15,0	1/1:18,0:17:24.55:692,25,0	1/1:19,0:19:15.52:471,16,0	0/1:29,1:30:99:188,0,654	1/1:13,0:13:5.27:134,5,0	0/1:14,0:12:67.56:68,0,818	0/0:18,0:18:9.03:0,9,251	0/1:31,0:30:99:266,0,1058	1/1:5,19:24:6.49:252,6,0	1/1:1,14:15:5.68:251,6,0	1/1:9,15:24:1.22:122,1,0	1/1:11,0:11:15.05:413,15,0	0/1:27,0:26:99:174,0,1814	0/1:16,0:16:99:131,0,501	./.
chr10	93742953	.	TTC	T	5571.48	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=3.630;DP=445;FS=7.199;HRun=0;HaplotypeScore=117.8559;InbreedingCoeff=0.4844;MQ=74.51;MQ0=4;MQRankSum=-3.778;QD=14.29;ReadPosRankSum=4.803;VQSLOD=4.0881;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:5.02:28,5,0	1/1:10,0:10:8.70:55,9,0	0/0:24,0:18:30.19:0,30,714	0/0:26,1:23:31.68:0,32,859	1/1:17,0:17:9.03:100,9,0	1/1:12,0:12:2.99:23,3,0	1/1:16,0:16:4.53:43,5,0	1/1:2,24:26:76.09:1076,76,0	1/1:14,0:14:20.91:166,21,0	1/1:14,0:14:33.03:429,33,0	1/1:9,0:9:5.97:43,6,0	1/1:7,0:7:2.99:23,3,0	1/1:10,0:10:29.99:401,30,0	1/1:11,0:11:14.80:106,15,0	1/1:17,0:16:15.79:99,16,0	1/1:19,0:19:11.92:87,12,0	1/1:19,0:19:30.07:548,30,0	1/1:10,1:11:5.61:53,6,0	1/1:13,0:13:28.23:338,28,0	1/1:0,15:16:2.98:21,3,0	1/1:28,1:29:52.79:719,53,0	1/1:19,0:19:5.97:46,6,0	1/1:14,0:14:5.30:45,5,0	1/1:16,0:16:1.36:20,1,0	1/1:11,0:11:8.65:51,9,0	1/1:22,1:23:61.19:642,61,0	1/1:12,0:12:29.88:412,30,0	./.
chr10	93743468	.	A	ACC	4989.95	PASS	AB=0.761;AC=20;AF=0.357;AN=56;BaseQRankSum=8.961;DP=627;FS=6.320;HRun=0;HaplotypeScore=169.9057;InbreedingCoeff=-0.3981;MQ=51.40;MQ0=9;MQRankSum=-1.470;QD=12.32;ReadPosRankSum=6.292;VQSLOD=4.1178;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:72.05:0,72,908	0/1:7,5:12:30.86:213,0,31	0/0:17,0:6:12.50:0,12,172	0/0:19,0:6:18.04:0,18,268	0/1:17,9:26:99:274,0,158	0/1:16,10:25:99:247,0,161	0/1:15,5:19:99:125,0,172	0/1:19,1:18:33.46:33,0,93	0/1:15,7:22:23.19:443,0,23	0/1:15,10:24:45.07:406,0,45	0/1:18,8:26:99:234,0,134	0/1:13,5:17:81.72:131,0,82	0/1:13,8:21:92.43:245,0,92	0/1:20,11:31:99:364,0,122	0/1:13,13:26:50.99:575,0,51	0/1:12,3:15:12.23:199,0,12	0/0:37,0:37:99:0,109,715	0/1:11,13:23:45.42:470,0,45	0/0:18,0:14:39.13:0,39,634	0/0:23,0:23:69.24:0,69,1122	0/0:28,0:28:84.27:0,84,1313	0/1:12,2:14:67.70:68,0,130	0/1:17,10:27:99:322,0,170	0/1:19,5:24:92.19:92,0,134	1/1:10,9:19:18.15:449,18,0	0/0:23,0:23:69.24:0,69,1123	0/0:29,0:29:87.25:0,87,1389	0/1:5,3:8:65.16:101,0,65
chr10	93743469	.	A	AAC	4935.10	PASS	AB=0.754;AC=19;AF=0.339;AN=56;BaseQRankSum=9.241;DP=622;FS=3.870;HRun=0;HaplotypeScore=168.2518;InbreedingCoeff=-0.5065;MQ=51.40;MQ0=7;MQRankSum=-3.335;QD=12.34;ReadPosRankSum=7.670;VQSLOD=4.3298;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:39.80:0,40,261	0/1:7,5:12:24.99:213,0,25	0/0:17,0:7:15.04:0,15,211	0/0:18,0:6:18.03:0,18,265	0/1:17,9:26:99:294,0,137	0/1:16,0:25:99:247,0,162	0/1:15,0:19:99:155,0,160	0/1:19,1:18:6.39:6,0,94	0/1:15,7:22:46.76:398,0,47	0/1:15,10:24:34.20:408,0,34	0/1:18,7:26:99:232,0,132	0/1:13,0:17:84.11:131,0,84	0/1:13,0:21:55.21:293,0,55	0/1:20,0:31:99:417,0,118	0/1:13,13:26:50.97:574,0,51	0/1:12,3:15:52.30:183,0,52	0/0:37,0:37:99:0,109,718	0/1:9,13:21:29.44:465,0,29	0/0:18,0:14:39.12:0,39,612	0/0:23,0:23:69.24:0,69,1124	0/0:28,0:28:84.29:0,84,1358	0/1:12,0:14:40.65:41,0,156	0/1:17,0:27:99:271,0,201	0/1:18,0:24:93.77:168,0,94	0/1:7,9:16:21.95:338,0,22	0/0:23,0:23:69.24:0,69,1123	0/0:29,0:29:84.29:0,84,1366	0/1:5,3:8:65.94:101,0,66
chr10	93743474	.	C	CA	797.12	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.159;DP=622;FS=3.716;HRun=3;HaplotypeScore=175.8268;InbreedingCoeff=0.9668;MQ=51.33;MQ0=7;MQRankSum=-5.764;QD=27.49;ReadPosRankSum=-0.271;VQSLOD=2.5714;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:28:74.56:892,75,0	0/0:11,0:11:26.59:0,27,208	0/0:18,0:9:23.26:0,23,286	0/0:20,0:7:13.62:0,14,167	0/0:26,0:26:65.03:0,65,595	0/0:27,0:26:57.78:0,58,473	0/0:21,0:20:56.15:0,56,527	0/0:25,0:23:57.13:0,57,633	0/0:21,0:21:59.29:0,59,508	0/0:25,0:24:68.11:0,68,594	0/0:26,0:26:71.49:0,71,662	0/0:18,0:17:41.09:0,41,350	0/0:21,0:21:45.52:0,46,334	0/0:30,0:29:79.68:0,80,613	0/0:26,0:26:73.29:0,73,572	0/0:12,0:12:35.39:0,35,312	0/0:38,0:38:99:0,105,1260	0/0:22,0:21:56.47:0,56,456	0/0:18,0:15:39.12:0,39,467	0/0:23,0:23:54.16:0,54,648	0/0:26,0:26:75.23:0,75,900	0/0:13,0:13:29.56:0,30,259	0/0:25,0:25:69.86:0,70,586	0/0:26,0:26:66.38:0,66,583	0/0:15,0:15:43.49:0,43,325	0/0:23,0:23:69.21:0,69,827	0/0:29,0:29:75.23:0,75,900	0/0:8,0:8:17.90:0,18,164
chr10	93743478	.	C	CA	652.34	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.172;DP=616;FS=3.555;HRun=3;HaplotypeScore=171.6022;InbreedingCoeff=0.9353;MQ=51.35;MQ0=7;MQRankSum=-6.921;QD=21.74;ReadPosRankSum=-0.037;VQSLOD=2.7457;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:29:81.85:747,82,0	0/0:9,0:9:26.59:0,27,213	0/0:23,0:14:32.15:0,32,385	0/0:21,0:8:9.02:0,9,135	0/0:25,0:25:62.04:0,62,588	0/0:25,0:24:60.08:0,60,613	0/0:22,0:21:60.11:0,60,621	0/0:22,0:20:54.15:0,54,636	0/0:19,0:19:56.30:0,56,499	0/0:25,0:24:65.11:0,65,574	0/0:24,0:24:65.57:0,66,655	0/0:18,0:17:39.05:0,39,390	0/0:19,0:19:51.05:0,51,504	0/0:30,0:29:83.97:0,84,803	0/0:25,0:25:73.30:0,73,596	0/0:12,0:12:35.53:0,36,331	0/0:40,0:40:99:0,111,1331	0/0:21,0:20:50.46:0,50,403	0/0:17,0:14:42.02:0,42,483	0/0:21,0:21:60.18:0,60,718	0/0:27,0:27:78.22:0,78,922	0/0:11,0:11:27.04:0,27,271	0/0:26,0:26:74.85:0,75,729	0/0:28,0:28:61.43:0,61,617	0/0:15,0:15:43.49:0,43,335	0/0:24,0:24:66.20:0,66,792	0/0:31,0:31:90.28:0,90,1077	0/0:6,0:6:17.90:0,18,165
chr10	93743482	.	C	CA	755.21	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.362;DP=609;FS=3.390;HRun=3;HaplotypeScore=166.7960;InbreedingCoeff=0.9637;MQ=51.61;MQ0=6;MQRankSum=-6.581;QD=24.36;ReadPosRankSum=-0.229;VQSLOD=2.5961;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:30:83.53:850,84,0	0/0:9,0:9:23.28:0,23,174	0/0:25,0:18:31.51:0,32,534	0/0:17,0:7:13:0,13,175	0/0:24,0:24:62.04:0,62,587	0/0:25,0:24:57.10:0,57,599	0/0:21,0:20:57.13:0,57,626	0/0:24,0:22:60.16:0,60,698	0/0:19,0:19:53.29:0,53,463	0/0:23,0:22:55.26:0,55,530	0/0:22,0:22:59.55:0,60,583	0/0:17,0:16:38.95:0,39,410	0/0:18,0:18:51.06:0,51,511	0/0:30,0:29:84.03:0,84,840	0/0:25,0:25:70.28:0,70,549	0/0:11,0:11:29.55:0,30,275	0/0:40,0:40:99:0,114,1365	0/0:20,0:19:53.43:0,53,422	0/0:19,0:16:39:0,39,436	0/0:21,0:21:60.18:0,60,719	0/0:27,0:27:81.23:0,81,959	0/0:10,0:10:27.07:0,27,304	0/0:26,0:26:71.98:0,72,763	0/0:27,0:27:54.36:0,54,591	0/0:15,0:15:43.49:0,43,335	0/0:23,0:23:63.19:0,63,756	0/0:31,0:31:93.27:0,93,1104	0/0:9,0:9:17.89:0,18,165
chr10	93743486	.	C	CA	641.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.225;DP=604;FS=3.583;HRun=3;HaplotypeScore=162.0649;InbreedingCoeff=0.9875;MQ=51.66;MQ0=5;MQRankSum=-5.947;QD=22.13;ReadPosRankSum=0.108;VQSLOD=2.9578;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:28:79.53:737,80,0	0/0:8,0:8:23.58:0,24,179	0/0:26,0:19:23.46:0,23,536	0/0:17,0:8:20.43:0,20,222	0/0:25,0:25:65.05:0,65,626	0/0:24,0:23:60.11:0,60,632	0/0:22,0:21:51.11:0,51,554	0/0:26,0:25:66.14:0,66,752	0/0:18,0:18:53.29:0,53,463	0/0:25,0:24:68:0,68,616	0/0:21,0:21:59.55:0,60,586	0/0:17,0:16:39.56:0,40,432	0/0:18,0:18:51.06:0,51,505	0/0:29,0:28:84.06:0,84,851	0/0:23,0:23:64.27:0,64,489	0/0:10,0:10:26.54:0,27,239	0/0:39,0:39:99:0,105,1260	0/0:21,0:20:50.43:0,50,386	0/0:18,0:15:42.13:0,42,501	0/0:20,0:20:60.18:0,60,719	0/0:27,0:27:78.24:0,78,935	0/0:11,0:11:27.07:0,27,304	0/0:26,0:26:72.09:0,72,762	0/0:27,0:27:56.87:0,57,621	0/0:15,0:15:40.48:0,40,299	0/0:22,0:22:60.18:0,60,720	0/0:31,0:31:90.28:0,90,1078	0/0:9,0:9:26.92:0,27,271
chr10	93743490	.	C	CA	794.66	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.978;DP=602;FS=6.155;HRun=3;HaplotypeScore=159.7402;InbreedingCoeff=0.9921;MQ=50.94;MQ0=4;MQRankSum=-5.969;QD=27.40;ReadPosRankSum=0.239;VQSLOD=2.5259;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:28:80.83:890,81,0	0/0:9,0:9:23.58:0,24,178	0/0:25,0:19:38.95:0,39,589	0/0:16,0:9:27.08:0,27,316	0/0:24,0:24:65.05:0,65,623	0/0:22,0:21:59.70:0,60,613	0/0:21,0:20:45.04:0,45,478	0/0:25,0:24:60.16:0,60,696	0/0:18,0:18:50.26:0,50,424	0/0:26,0:25:71.05:0,71,636	0/0:21,0:21:50.45:0,50,446	0/0:18,0:17:42.46:0,42,430	0/0:19,0:19:49.32:0,49,444	0/0:29,0:28:77.39:0,77,751	0/0:23,0:23:64.26:0,64,477	0/0:12,0:12:26.54:0,27,238	0/0:37,0:37:99:0,108,1265	0/0:22,0:21:51.70:0,52,404	0/0:18,0:15:45.14:0,45,535	0/0:21,0:21:60.17:0,60,707	0/0:26,0:26:75.23:0,75,898	0/0:12,0:12:23.55:0,24,241	0/0:26,0:26:65.69:0,66,673	0/0:28,0:28:60.49:0,60,598	0/0:14,0:14:40.46:0,40,299	0/0:22,0:22:60.18:0,60,719	0/0:30,0:30:81.25:0,81,971	0/0:9,0:9:26.92:0,27,272
chr10	93743837	.	CT	C	7002.60	PASS	AB=0.917;AC=51;AF=0.911;AN=56;BaseQRankSum=-3.721;DP=401;FS=32.962;HRun=10;HaplotypeScore=67.8024;InbreedingCoeff=0.7198;MQ=71.86;MQ0=0;MQRankSum=-6.179;QD=19.19;ReadPosRankSum=3.095;VQSLOD=3.5697;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:39.09:0,39,423	1/1:1,3:4:8.99:78,9,0	0/1:10,1:10:9.82:10,0,96	0/0:18,0:17:24.65:0,25,209	1/1:7,14:21:44.94:383,45,0	1/1:3,14:17:41.94:357,42,0	1/1:0,3:3:5.97:52,6,0	1/1:12,22:34:68.97:599,69,0	1/1:2,13:14:35.99:312,36,0	1/1:4,10:14:32.99:286,33,0	1/1:3,13:16:35.94:305,36,0	1/1:2,10:12:29.99:260,30,0	1/1:0,10:10:29.99:260,30,0	1/1:1,13:14:38.99:338,39,0	1/1:0,7:7:21:182,21,0	1/1:2,7:9:21:182,21,0	1/1:8,11:19:35.93:304,36,0	1/1:6,10:16:32.89:273,33,0	1/1:1,23:24:68.96:593,69,0	1/1:3,4:7:15:130,15,0	1/1:1,7:8:17.91:147,18,0	1/1:2,4:6:11.99:104,12,0	1/1:9,8:17:29.96:260,30,0	1/1:2,13:16:37.80:314,38,0	1/1:2,6:8:12:104,12,0	1/1:7,17:24:53.98:469,54,0	1/1:7,7:14:29.93:253,30,0	1/1:2,17:19:50.99:443,51,0
chr10	93744005	.	CG	C	101.93	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=2.427;DP=252;FS=2.253;HRun=2;HaplotypeScore=31.3898;InbreedingCoeff=0.5679;MQ=40.54;MQ0=20;MQRankSum=-2.454;QD=6.80;ReadPosRankSum=-0.397;VQSLOD=0.6444;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,12:13:15.05:190,15,0	0/0:2,0:2:6.02:0,6,88	0/0:5,0:1:0:0,0,0	./.	0/0:17,0:17:32.98:0,33,399	0/0:8,0:8:11.93:0,12,97	0/0:7,0:6:8.86:0,9,63	0/0:18,0:16:41.82:0,42,416	0/0:12,0:11:23.12:0,23,404	0/0:10,0:10:26.90:0,27,298	0/0:11,0:11:21.01:0,21,267	0/0:7,0:7:14.97:0,15,126	0/0:5,0:4:8.95:0,9,71	0/0:2,0:2:5.91:0,6,40	0/0:5,0:4:11.96:0,12,130	0/0:6,0:5:15.05:0,15,221	0/0:17,0:17:37.51:0,38,427	0/0:21,0:20:46.07:0,46,619	0/0:11,0:8:21.03:0,21,282	0/0:19,0:18:51.08:0,51,649	0/0:5,0:5:11.24:0,11,122	0/0:5,0:4:12.01:0,12,123	0/0:5,0:5:12.01:0,12,107	0/0:7,0:7:14.89:0,15,114	0/0:7,0:4:12.02:0,12,155	0/0:10,0:9:21.03:0,21,283	0/0:6,0:6:18.05:0,18,243	0/0:6,0:3:6.02:0,6,89
chr10	93744007	.	G	GA	385.45	PASS	AB=1.000;AC=17;AF=0.315;AN=54;BaseQRankSum=0.302;DP=269;FS=3.339;HRun=10;HaplotypeScore=76.7644;InbreedingCoeff=0.7226;MQ=39.08;MQ0=19;MQRankSum=-3.130;QD=6.53;ReadPosRankSum=-2.171;VQSLOD=1.4434;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:15:12.47:0,12,46	0/0:2,0:2:5.99:0,6,49	0/1:4,0:1:0:0,0,0	./.	0/0:17,1:18:20.92:0,21,172	1/1:5,5:10:6.02:64,6,0	1/1:5,2:6:6.01:63,6,0	0/0:17,0:15:19.37:0,19,143	0/0:12,0:11:26.89:0,27,220	0/0:10,0:10:3.66:0,4,100	0/0:10,0:10:17.75:0,18,134	1/1:5,4:9:9.02:95,9,0	1/1:4,1:4:3.01:32,3,0	1/1:4,0:4:3.01:31,3,0	0/0:5,0:4:5.99:0,6,49	0/0:6,0:5:14.98:0,15,123	0/0:17,0:17:26.90:0,27,215	0/0:21,0:21:37.94:0,38,297	0/0:13,0:10:17.97:0,18,148	0/0:21,0:20:38.86:0,39,310	0/0:4,0:4:8.79:0,9,63	1/1:4,3:6:9.02:96,9,0	1/1:1,4:6:11.86:110,12,0	1/1:3,4:7:6.01:62,6,0	0/0:6,0:3:8.97:0,9,70	0/0:12,1:12:17.95:0,18,148	0/0:8,0:8:14.98:0,15,123	0/0:7,0:4:5.99:0,6,49
chr10	93744035	.	C	CT	75.07	PASS	AB=1.000;AC=13;AF=0.813;AN=16;BaseQRankSum=-0.965;DP=48;FS=3.256;HRun=0;HaplotypeScore=9.4482;MQ=32.66;MQ0=2;MQRankSum=2.475;QD=4.42;ReadPosRankSum=-2.608;VQSLOD=2.3418;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:2,0:2:3:25,3,0	./.	./.	0/1:6,0:6:1.61:2,0,32	./.	1/1:1,0:1:3:28,3,0	./.	./.	./.	./.	./.	1/1:0,1:1:2.37:8,2,0	./.	1/1:2,2:4:5.96:43,6,0	./.	./.	1/1:1,0:1:2.99:24,3,0	./.	./.	./.	./.	1/1:2,0:2:3:27,3,0	./.	0/0:1,0:1:2.74:0,3,12
chr10	93970098	.	GGTGTGT	G	1023.77	PASS	AB=0.940;AC=21;AF=0.389;AN=54;BaseQRankSum=1.515;DP=528;FS=26.230;HRun=0;HaplotypeScore=145.1632;InbreedingCoeff=0.3637;MQ=61.90;MQ0=8;MQRankSum=-4.375;QD=4.25;ReadPosRankSum=-1.723;VQSLOD=0.9824;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:30:32.18:0,32,372	./.	0/0:18,0:12:6.02:0,6,92	0/0:26,0:18:12.04:0,12,168	0/0:16,0:16:18:0,18,172	1/1:4,9:12:11.91:122,12,0	1/1:11,16:26:5.93:40,6,0	0/0:27,0:25:49.26:0,49,507	0/1:19,0:19:20.60:21,0,172	0/0:30,0:30:33.51:0,34,508	0/0:5,0:4:2.99:0,3,24	1/1:6,13:20:15.02:249,15,0	1/1:9,7:16:11.05:233,11,0	1/1:10,10:21:9.03:146,9,0	0/1:14,0:14:8.03:35,0,8	0/1:14,0:14:7.67:8,0,86	0/0:22,0:23:2.57:0,3,186	0/0:23,0:23:32.31:0,32,233	0/0:26,0:26:0.84:0,1,210	0/1:10,0:10:9.21:9,0,58	0/0:27,0:26:5.59:0,6,70	1/1:6,2:17:11.89:158,12,0	0/1:4,10:14:0:0,0,0	1/1:13,17:31:6.51:125,7,0	0/0:13,0:14:24.67:0,25,221	0/0:18,0:18:21.89:0,22,242	0/1:18,0:18:13.90:14,0,199	0/1:7,0:7:38.33:38,0,60
chr10	93970133	.	GCC	G	3142.76	PASS	AB=0.782;AC=31;AF=0.554;AN=56;BaseQRankSum=6.874;DP=573;FS=9.002;HRun=2;HaplotypeScore=129.7311;InbreedingCoeff=0.5030;MQ=50.55;MQ0=26;MQRankSum=-1.960;QD=10.20;ReadPosRankSum=0.134;VQSLOD=-0.1266;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:12.83:0,13,659	1/1:0,3:3:3.01:34,3,0	0/1:41,1:9:45:45,0,58	0/0:39,1:7:13.86:0,14,239	1/1:14,1:15:11.85:113,12,0	0/0:20,0:20:30.55:0,31,460	0/0:35,0:34:51.17:0,51,851	0/1:24,4:25:58.60:225,0,59	1/1:6,2:18:4.96:83,5,0	0/1:25,5:29:59.83:376,0,60	1/1:4,4:7:8.96:109,9,0	0/0:26,0:26:26.38:0,26,608	0/0:15,0:14:26.03:0,26,299	0/0:22,0:22:16.99:0,17,372	1/1:1,2:11:2.34:60,2,0	1/1:8,4:12:12.13:144,12,0	1/1:16,9:25:24.47:436,24,0	1/1:13,4:17:15.60:377,16,0	0/1:5,1:14:17.71:255,0,18	1/1:3,11:14:4.74:52,5,0	1/1:17,5:21:8.67:135,9,0	0/0:18,0:18:14.79:0,15,209	0/0:20,0:20:11.93:0,12,187	0/0:34,0:34:29.44:0,29,512	1/1:12,1:13:10.13:218,10,0	0/1:5,10:14:15.31:178,0,15	1/1:7,9:16:35.73:385,36,0	1/1:2,2:4:9.03:117,9,0
chr10	93970134	.	CCTGTGTCTGTGTCTGTGT	C	4095.62	PASS	AB=0.913;AC=24;AF=0.429;AN=56;BaseQRankSum=4.390;DP=572;FS=24.663;HRun=0;HaplotypeScore=226.9596;InbreedingCoeff=0.3451;MQ=50.66;MQ0=26;MQRankSum=-1.252;QD=15.63;ReadPosRankSum=-1.317;VQSLOD=0.9010;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:45.63:0,46,2447	1/1:3,0:3:8.95:74,9,0	0/0:42,0:9:5.84:0,6,262	0/0:40,0:8:17.44:0,17,757	0/1:8,7:15:13.27:16,0,13	0/0:19,0:19:30.57:0,31,1412	0/0:35,0:34:51.18:0,51,2646	1/1:15,13:25:38.74:544,39,0	0/1:18,0:18:51.33:116,0,51	0/1:12,18:29:27.68:591,0,28	1/1:8,0:7:6.02:168,6,0	0/0:26,0:26:48.10:0,48,2191	0/0:15,0:14:24.08:0,24,1243	0/0:22,0:22:27.56:0,28,1281	0/1:11,0:11:16.19:113,0,16	1/1:12,0:12:8.10:91,8,0	1/1:24,0:25:36.63:778,37,0	0/1:17,0:17:60.11:150,0,60	0/1:15,0:14:5.57:525,0,6	1/1:14,0:14:12.47:163,12,0	1/1:21,0:21:8.89:179,9,0	0/0:18,0:18:15:0,15,573	0/0:20,0:20:11.93:0,12,565	0/0:34,0:34:35.59:0,36,1993	0/1:13,0:13:51.32:348,0,51	0/1:15,0:14:8.40:78,0,8	1/1:16,0:16:4.05:161,4,0	0/0:4,0:4:6.02:0,6,90
chr10	93970137	.	GTGTCTGTGTC	G	1982.22	PASS	AB=0.984;AC=22;AF=0.393;AN=56;BaseQRankSum=8.709;DP=570;FS=12.316;HRun=0;HaplotypeScore=181.1845;InbreedingCoeff=0.1640;MQ=50.51;MQ0=26;MQRankSum=-3.563;QD=8.03;ReadPosRankSum=2.049;VQSLOD=2.0343;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:72.59:0,73,2328	1/1:3,0:3:3.01:34,3,0	0/0:44,0:11:11.61:0,12,503	0/0:41,0:8:21.07:0,21,806	0/0:13,0:13:0.64:0,1,2	0/0:19,0:19:30.08:0,30,1326	0/0:35,0:34:57.20:0,57,2616	0/1:27,0:24:25.77:26,0,225	1/1:16,2:18:12.55:176,13,0	0/1:27,1:27:99:181,0,202	1/1:9,0:8:4.08:92,4,0	0/0:27,0:27:54.18:0,54,2018	0/0:16,0:15:30.03:0,30,958	0/0:22,0:22:30.10:0,30,1177	1/1:9,2:11:7.84:152,8,0	0/1:10,1:11:21.18:75,0,21	0/1:23,1:24:41.88:316,0,42	0/1:17,0:17:13.87:99,0,14	0/1:15,0:14:71.01:220,0,71	1/1:12,1:13:1.35:123,1,0	1/1:23,0:22:5.93:91,6,0	0/0:17,0:17:15.05:0,15,578	0/0:20,0:20:11.78:0,12,552	0/0:33,0:34:38.47:0,38,1576	0/1:11,0:11:5.49:140,0,5	0/1:16,0:15:94.11:106,0,94	0/1:17,0:17:7.86:307,0,8	0/1:4,0:4:3.48:15,0,3
chr10	93970139	.	GTC	G	772.18	PASS	AB=0.965;AC=20;AF=0.357;AN=56;BaseQRankSum=9.656;DP=570;FS=24.181;HRun=0;HaplotypeScore=135.9019;InbreedingCoeff=-0.0876;MQ=50.60;MQ0=27;MQRankSum=-2.077;QD=2.68;ReadPosRankSum=2.219;VQSLOD=0.9815;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:72.58:0,73,1180	1/1:3,0:3:2.90:16,3,0	0/1:45,0:12:5.57:6,0,300	0/0:42,0:9:24.07:0,24,411	0/0:12,0:12:4.98:0,5,21	0/0:19,0:19:30.05:0,30,568	0/0:35,0:34:63.16:0,63,1084	0/1:26,1:24:22.16:22,0,245	0/1:18,0:18:14:14,0,59	0/1:27,0:26:50.01:50,0,277	0/1:9,0:8:9.75:37,0,10	0/0:27,0:27:54.18:0,54,962	0/0:17,0:16:33:0,33,500	0/0:22,0:22:33.04:0,33,571	0/1:11,0:11:14.29:24,0,14	0/1:11,0:11:8.77:9,0,45	0/1:23,0:23:44.07:168,0,44	0/1:15,0:15:30.10:30,0,77	0/1:15,1:14:61.25:161,0,61	0/1:11,1:13:5.66:26,0,6	1/1:21,1:21:8.52:66,9,0	0/0:18,0:18:21.04:0,21,331	0/0:20,0:20:12.03:0,12,232	0/0:35,0:35:41.85:0,42,720	0/1:12,0:12:58.09:71,0,58	0/1:15,1:15:48.18:48,0,123	0/1:12,2:16:5.92:116,0,6	1/1:2,2:4:8.97:75,9,0
chr10	93974121	.	T	TA	7097.23	PASS	AB=0.558;AC=35;AF=0.625;AN=56;BaseQRankSum=-8.556;DP=570;FS=5.398;HRun=11;HaplotypeScore=72.8067;InbreedingCoeff=0.8768;MQ=71.06;MQ0=2;MQRankSum=-0.377;QD=18.63;ReadPosRankSum=-0.206;VQSLOD=5.8041;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:33:54.89:729,55,0	1/1:2,10:12:21.51:214,22,0	0/0:25,0:18:4.75:0,5,141	0/0:11,0:7:5.72:0,6,17	1/1:5,15:21:9.90:404,10,0	0/0:18,0:19:46.85:0,47,354	0/0:22,0:23:51.55:0,52,381	1/1:8,17:26:44.74:416,45,0	1/1:3,17:20:39.07:394,39,0	1/1:5,16:21:25.71:421,26,0	1/1:2,24:27:56.94:558,57,0	0/0:11,0:11:23.86:0,24,186	0/0:16,0:16:32.81:0,33,251	0/0:19,0:19:41.78:0,42,324	1/1:0,11:11:33.07:335,33,0	1/1:0,12:12:33.07:335,33,0	1/1:3,26:29:24.87:433,25,0	1/1:5,11:16:27.05:274,27,0	1/1:12,19:31:36.77:515,37,0	1/1:6,18:24:45.01:434,45,0	1/1:2,14:16:27.05:274,27,0	0/0:17,1:18:23.19:0,23,323	0/0:21,0:23:54.76:0,55,397	0/0:24,0:24:47.78:0,48,371	0/1:5,19:24:14.14:375,0,14	1/1:6,22:29:56.69:528,57,0	1/1:7,16:22:25.09:343,25,0	1/1:2,3:5:11.99:113,12,0
chr10	93974460	.	TG	T	15244.48	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=13.519;DP=666;FS=3.330;HRun=2;HaplotypeScore=75.0776;InbreedingCoeff=1.0000;MQ=91.24;MQ0=0;MQRankSum=-4.094;QD=36.56;ReadPosRankSum=3.663;VQSLOD=5.6104;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,43:44:99:1519,117,0	1/1:0,13:13:39.13:506,39,0	0/0:24,0:24:70.10:0,70,1006	0/0:29,0:29:87.22:0,87,1222	1/1:1,27:28:78.19:991,78,0	0/0:12,0:12:36.12:0,36,539	0/0:28,0:28:84.28:0,84,1249	1/1:0,19:19:57.19:739,57,0	1/1:0,17:17:51.17:662,51,0	1/1:0,20:20:60.19:774,60,0	1/1:0,24:24:72.23:934,72,0	0/0:29,0:29:87.29:0,87,1303	0/0:32,0:32:93.30:0,93,1372	0/0:22,0:22:66.21:0,66,964	1/1:0,26:26:69.22:895,69,0	1/1:0,17:17:51.17:662,51,0	1/1:2,33:35:90.29:1168,90,0	1/1:0,20:20:60.19:777,60,0	1/1:0,20:20:60.19:767,60,0	1/1:0,20:20:60.16:761,60,0	1/1:1,26:27:75.24:974,75,0	0/0:22,0:22:66.12:0,66,884	0/0:27,0:27:81.26:0,81,1190	0/0:24,0:24:69.23:0,69,1034	1/1:1,19:20:48.16:623,48,0	1/1:1,26:27:78.25:1012,78,0	1/1:0,27:27:75.24:973,75,0	1/1:0,13:13:39.13:506,39,0
chr10	93975011	.	A	ATGTGTACG	9438.48	PASS	AB=0.947;AC=44;AF=0.786;AN=56;BaseQRankSum=-1.316;DP=890;FS=0.000;HRun=0;HaplotypeScore=312.5371;InbreedingCoeff=0.4625;MQ=47.63;MQ0=11;MQRankSum=-0.355;QD=11.55;ReadPosRankSum=3.595;VQSLOD=2.2576;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:40:0.09:0,0,0	1/1:10,0:10:15.03:334,15,0	0/0:29,0:9:8.60:0,9,276	0/0:44,0:12:10.63:0,11,121	0/1:27,0:27:0:1,0,0	1/1:22,0:22:8.95:205,9,0	1/1:19,30:51:1.81:90,2,0	1/1:30,0:30:54.74:921,55,0	1/1:31,0:31:21.82:411,22,0	1/1:32,0:32:75.15:1620,75,0	1/1:21,0:21:2.88:97,3,0	1/1:41,0:40:21.90:504,22,0	1/1:10,20:29:9.50:192,9,0	1/1:41,0:40:36.99:912,37,0	1/1:50,0:48:11.07:187,11,0	1/1:39,0:39:16.08:320,16,0	0/1:22,0:22:29.76:217,0,30	1/1:15,0:15:9.03:232,9,0	1/1:23,0:23:51.05:1096,51,0	0/1:23,0:23:0.02:1,0,0	0/1:92,0:92:0:1,0,0	1/1:30,0:30:2.99:97,3,0	0/1:8,8:16:0:0,0,0	0/1:32,3:35:0:1,0,0	0/1:30,0:30:0:2,0,0	1/1:34,0:34:67.08:1344,67,0	1/1:22,0:20:6.46:317,6,0	1/1:8,0:8:17.99:335,18,0
chr10	93975018	.	C	CGTGTGTACGTGT	14798.60	PASS	AB=0.920;AC=37;AF=0.661;AN=56;BaseQRankSum=-4.912;DP=873;FS=0.000;HRun=0;HaplotypeScore=312.9952;InbreedingCoeff=0.2251;MQ=45.16;MQ0=14;MQRankSum=-1.978;QD=19.63;ReadPosRankSum=4.570;VQSLOD=3.0000;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,27:45:0:0,0,0	1/1:10,0:11:15.05:551,15,0	0/0:26,0:8:8.58:0,9,399	0/0:42,0:10:8.37:0,8,167	0/1:24,0:25:0.21:1,0,0	0/1:22,0:22:39.85:193,0,40	0/1:49,0:48:29.69:30,0,82	1/1:21,0:32:75.21:1702,75,0	1/1:24,0:26:21.96:781,22,0	1/1:28,0:34:87.17:2865,87,0	1/1:17,0:20:2.87:97,3,0	0/1:42,0:43:75.90:270,0,76	0/1:26,0:25:10.49:77,0,10	0/1:38,0:38:35.41:499,0,35	1/1:44,0:46:9.03:245,9,0	1/1:34,0:37:20:723,20,0	0/1:14,0:21:54.50:312,0,54	1/1:4,10:16:12.04:610,12,0	1/1:23,0:23:51.17:1700,51,0	0/1:22,0:24:0.32:1,0,0	0/1:32,44:92:0.33:1,0,0	1/1:20,0:27:3.01:45,3,0	0/0:15,0:14:2.98:0,3,35	0/0:35,0:35:2.23:0,2,51	0/1:26,0:28:0:2,0,0	1/1:25,0:32:75.21:2701,75,0	1/1:20,0:19:21.50:776,22,0	1/1:6,1:7:20.94:618,21,0
chr10	93975022	.	T	TGTAC	8195.04	PASS	AB=0.827;AC=34;AF=0.607;AN=56;BaseQRankSum=-1.578;DP=819;FS=8.296;HRun=0;HaplotypeScore=281.7778;InbreedingCoeff=0.1817;MQ=41.62;MQ0=16;MQRankSum=-2.107;QD=13.98;ReadPosRankSum=7.564;VQSLOD=2.3275;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:2.99:32,3,0	1/1:6,6:12:14.97:315,15,0	0/0:24,0:7:11.07:0,11,268	0/0:41,0:9:9.79:0,10,141	0/1:6,16:24:0:1,0,0	0/1:20,0:20:99:142,0,121	0/0:46,0:45:8.79:0,9,174	0/1:28,3:30:63.13:982,0,63	1/1:8,17:27:21.52:471,22,0	1/1:18,14:31:34.09:1419,34,0	1/1:9,10:19:2.88:52,3,0	0/1:40,0:39:99:190,0,173	0/1:22,0:21:18.81:71,0,19	0/1:39,0:37:42.52:381,0,43	1/1:16,31:45:11.64:199,12,0	0/1:9,24:35:10.26:360,0,10	1/1:15,6:21:15.49:255,15,0	1/1:13,1:14:8.45:215,8,0	1/1:9,13:22:10.01:908,10,0	0/1:8,15:24:0.11:1,0,0	0/0:72,0:71:0.22:0,0,1	0/1:25,0:25:33.53:34,0,40	0/0:16,0:14:2.59:0,3,58	0/0:34,0:34:2.26:0,2,57	0/1:11,18:29:1.03:1,0,2	1/1:19,14:33:40.66:1469,41,0	1/1:7,11:19:2.11:336,2,0	1/1:6,3:9:17.94:362,18,0
chr10	93975024	.	T	TAC	3812.79	PASS	AB=0.908;AC=25;AF=0.446;AN=56;BaseQRankSum=2.636;DP=788;FS=38.563;HRun=0;HaplotypeScore=276.5445;InbreedingCoeff=-0.2208;MQ=39.95;MQ0=18;MQRankSum=-0.985;QD=7.63;ReadPosRankSum=8.018;VQSLOD=1.4073;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:1.91:0,2,7	1/1:13,0:13:6.07:174,6,0	0/0:24,0:7:15.51:0,16,234	0/0:41,0:9:11.66:0,12,139	0/1:19,1:20:0:1,0,0	0/1:13,7:20:73.09:73,0,112	0/0:42,0:40:8.66:0,9,156	0/1:36,1:36:99:408,0,306	1/1:24,2:26:4.85:232,5,0	0/1:29,1:28:99:539,0,155	1/1:16,2:18:2.88:54,3,0	0/1:23,15:37:99:141,0,207	0/1:19,0:18:7.90:8,0,25	0/1:20,17:35:53.67:383,0,54	0/1:45,2:44:24.23:88,0,24	0/1:31,0:31:13.62:149,0,14	1/1:20,1:21:15.42:211,15,0	0/1:13,0:13:11.01:77,0,11	0/1:20,1:20:73.72:417,0,74	1/1:21,0:21:2.01:6,2,0	0/0:66,1:66:1.77:0,2,36	0/1:13,12:25:40.07:43,0,40	0/0:13,1:12:3.01:0,3,49	0/0:25,11:35:8.22:0,8,106	0/0:28,0:27:3.93:0,4,74	0/1:33,0:33:99:503,0,136	0/1:21,0:19:66.58:129,0,67	0/1:9,0:9:75.43:177,0,75
chr10	93975026	.	TGTAC	T	2295.88	PASS	AB=0.988;AC=32;AF=0.571;AN=56;BaseQRankSum=1.311;DP=802;FS=0.540;HRun=0;HaplotypeScore=280.4778;InbreedingCoeff=0.0739;MQ=39.02;MQ0=19;MQRankSum=-0.432;QD=3.81;ReadPosRankSum=3.336;VQSLOD=2.1709;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:0.12:0,0,0	1/1:13,0:13:15.91:104,16,0	0/0:24,0:7:16.83:0,17,303	0/0:39,0:8:3.47:0,3,10	0/0:21,0:21:2.04:0,2,7	0/1:20,0:20:13.32:13,0,120	0/0:42,0:40:8.73:0,9,177	0/1:41,0:39:99:289,0,331	0/1:26,1:27:7.80:68,0,8	1/1:27,4:29:19.17:366,19,0	1/1:18,0:18:1.02:14,1,0	0/1:37,0:36:13.81:14,0,247	0/1:19,0:18:32.31:32,0,36	0/1:36,0:34:37.78:38,0,73	1/1:45,2:44:4.77:67,5,0	1/1:31,0:31:10.54:85,11,0	1/1:20,1:21:0.28:57,0,0	1/1:13,0:13:2.73:60,3,0	0/1:24,0:23:93.48:93,0,159	0/0:20,1:21:2.66:0,3,19	1/1:70,0:69:1.80:44,2,0	0/1:25,0:25:8.81:9,0,30	0/0:16,0:14:3.48:0,3,76	0/0:36,0:35:9.90:0,10,144	1/1:30,1:30:9.32:177,9,0	0/1:30,3:33:71.11:530,0,71	1/1:20,0:18:9.63:137,10,0	1/1:11,0:11:26.44:260,26,0
chr10	93975028	.	TAC	T	2596.71	PASS	AB=0.837;AC=32;AF=0.571;AN=56;BaseQRankSum=4.908;DP=777;FS=3.279;HRun=0;HaplotypeScore=268.9852;InbreedingCoeff=0.1048;MQ=37.39;MQ0=19;MQRankSum=-0.673;QD=4.70;ReadPosRankSum=4.105;VQSLOD=2.5950;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:34:0:0,0,0	1/1:11,2:13:16.24:114,16,0	0/0:20,0:7:3.01:0,3,191	0/0:34,0:6:4.15:0,4,19	0/0:19,1:20:2.04:0,2,7	0/1:13,7:20:32.93:33,0,97	0/0:41,0:39:8.70:0,9,154	0/1:41,0:39:99:163,0,518	1/1:23,1:24:5.74:118,6,0	1/1:29,1:29:23.74:428,24,0	1/1:18,1:19:1.14:36,1,0	0/1:21,16:36:49.75:50,0,169	1/1:17,1:17:3.99:42,4,0	0/1:17,17:32:29.32:168,0,29	1/1:43,2:43:9.38:75,9,0	1/1:27,2:29:12.39:98,12,0	1/1:20,0:20:8.70:91,9,0	0/1:11,0:11:63.32:80,0,63	0/1:25,0:24:99:200,0,186	0/0:18,2:20:2.46:0,2,12	1/1:67,4:70:2.39:18,2,0	0/1:13,12:25:29.75:30,0,30	0/0:15,1:14:3.48:0,3,58	0/0:25,11:35:9.90:0,10,124	1/1:28,2:29:8.90:172,9,0	0/1:28,3:31:94.59:453,0,95	1/1:18,0:16:5.73:138,6,0	1/1:9,2:11:15.68:256,16,0
chr10	93975038	.	CGTGT	C	1262.59	PASS	AB=0.977;AC=31;AF=0.596;AN=52;BaseQRankSum=-3.722;DP=761;FS=1.871;HRun=0;HaplotypeScore=280.2100;InbreedingCoeff=-0.0339;MQ=34.25;MQ0=22;MQRankSum=4.404;QD=2.11;ReadPosRankSum=0.960;VQSLOD=2.4661;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:2.89:0,3,42	1/1:12,0:13:2.25:21,2,0	./.	./.	0/0:19,0:19:0.16:0,0,3	1/1:12,5:20:8.67:131,9,0	1/1:33,5:36:16.66:214,17,0	0/0:44,0:40:6.43:0,6,65	0/1:27,0:26:6.95:7,0,20	0/1:31,0:29:70.85:71,0,75	1/1:17,1:18:1.55:4,2,0	1/1:29,5:33:14.45:205,14,0	0/1:17,0:16:69.04:69,0,74	1/1:28,2:30:9.02:121,9,0	0/1:48,0:47:13.50:91,0,13	0/1:26,0:28:17.54:20,0,18	0/1:20,1:25:8.66:44,0,9	0/0:11,0:11:8.96:0,9,94	0/1:30,0:29:38.58:39,0,39	0/0:22,0:22:3.72:0,4,21	0/1:66,0:65:6.88:12,0,7	1/1:18,1:19:3.01:47,3,0	1/1:13,1:12:5.75:70,6,0	1/1:24,13:36:8.74:120,9,0	1/1:31,0:30:5.31:63,5,0	0/1:32,0:32:9.21:9,0,102	0/1:22,0:20:1.81:2,0,52	0/1:10,0:10:22.78:50,0,23
chr10	93975044	.	T	TAC	3189.03	PASS	AB=0.913;AC=31;AF=0.554;AN=56;BaseQRankSum=7.452;DP=740;FS=8.198;HRun=0;HaplotypeScore=239.9865;InbreedingCoeff=-0.2294;MQ=34.88;MQ0=27;MQRankSum=-3.657;QD=4.97;ReadPosRankSum=-0.339;VQSLOD=1.7459;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:6.85:7,0,82	1/1:8,2:15:8.65:102,9,0	0/1:9,0:2:2.64:3,0,40	0/0:19,0:1:3.01:0,3,43	1/1:15,1:16:3:31,3,0	0/0:20,0:20:12.12:0,12,100	0/1:43,0:40:52.34:52,0,171	0/0:41,0:37:27.25:0,27,665	0/1:21,7:27:7.39:222,0,7	1/1:19,7:24:4.60:510,5,0	1/1:16,0:17:3:31,3,0	0/1:29,1:29:82.08:82,0,134	0/1:19,0:19:67.62:68,0,110	0/1:25,2:25:42.63:148,0,43	1/1:35,7:42:32.73:443,33,0	1/1:25,3:28:7.51:163,8,0	0/1:28,0:28:0.55:1,0,157	0/1:15,0:15:70.38:131,0,70	0/1:26,2:27:99:227,0,316	0/1:13,2:15:1.25:1,0,38	1/1:61,7:67:7.30:61,7,0	0/0:17,1:18:4.76:0,5,63	0/1:17,1:15:5.73:6,0,78	0/1:30,5:33:36.32:36,0,56	0/1:23,7:30:20.83:227,0,21	0/1:29,2:31:99:373,0,253	0/1:18,3:20:30.62:244,0,31	0/1:6,2:9:23.41:179,0,23
chr10	93975381	.	ACTGTC	A	650.61	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.687;DP=700;FS=2.430;HRun=0;HaplotypeScore=169.6728;InbreedingCoeff=0.9917;MQ=80.85;MQ0=0;MQRankSum=-5.856;QD=28.29;ReadPosRankSum=0.713;VQSLOD=3.5798;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,129,3899	0/0:8,0:8:21.07:0,21,645	0/0:22,0:22:54.16:0,54,1500	0/0:17,0:17:45.08:0,45,1046	0/0:19,0:19:45.63:0,46,1340	0/0:20,0:20:57.20:0,57,1748	0/0:34,0:34:99:0,99,2961	0/0:32,0:32:90.27:0,90,2319	0/0:24,0:24:69.23:0,69,2017	0/0:27,0:27:78.26:0,78,2210	0/0:18,0:18:54.19:0,54,1607	0/0:37,0:37:99:0,108,3289	0/0:21,0:21:60.21:0,60,1801	0/0:34,0:34:99:0,102,2935	0/0:34,0:34:99:0,99,2937	0/0:28,0:28:78.25:0,78,2331	1/1:1,22:23:36.12:745,36,0	0/0:23,0:23:57.20:0,57,1711	0/0:15,0:15:39.12:0,39,1067	0/0:18,0:18:48.15:0,48,1404	0/0:56,0:56:99:0,150,4346	0/0:15,0:15:39.11:0,39,1117	0/0:22,0:21:57.20:0,57,1657	0/0:38,0:38:99:0,111,3224	0/0:25,0:25:63.17:0,63,1847	0/0:18,0:18:54.18:0,54,1573	0/0:19,0:19:54.19:0,54,1653	0/0:7,0:7:21.07:0,21,646
chr10	93976621	.	G	GC	5991.62	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-3.763;DP=535;FS=1.690;HRun=0;HaplotypeScore=70.3221;InbreedingCoeff=0.9711;MQ=76.31;MQ0=0;MQRankSum=1.904;QD=20.24;ReadPosRankSum=-1.672;VQSLOD=6.0517;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:27:49.17:0,49,426	1/1:0,4:4:8.94:108,9,0	0/0:18,0:10:17.57:0,18,150	0/0:30,0:23:28.59:0,29,317	1/1:3,17:21:42.65:446,43,0	0/0:22,0:27:69.72:0,70,797	0/0:19,0:21:50.61:0,51,537	1/1:1,3:32:86.39:822,86,0	1/1:3,16:19:32.29:427,32,0	1/1:4,23:27:71.28:782,71,0	1/1:3,11:15:31.84:263,32,0	0/0:16,0:19:49.19:0,49,473	0/0:19,0:21:57.52:0,58,612	0/0:12,0:14:29.05:0,29,267	1/1:3,13:18:26.30:338,26,0	1/1:9,7:16:33.88:329,34,0	0/0:4,0:11:14.67:0,15,113	1/1:15,6:21:40.76:454,41,0	1/1:7,2:26:68.19:629,68,0	1/1:1,2:19:49.75:469,50,0	1/1:7,0:19:12.50:94,12,0	0/0:12,0:14:25.15:0,25,277	0/0:12,0:12:33.07:0,33,391	0/0:23,0:24:69.11:0,69,770	1/1:3,13:16:15.52:215,16,0	1/1:1,2:13:35.62:357,36,0	1/1:0,0:18:8.98:89,9,0	1/1:2,4:10:14.98:170,15,0
chr10	93977405	.	G	GAA	9216.49	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=4.875;DP=658;FS=23.788;HRun=2;HaplotypeScore=153.2071;InbreedingCoeff=0.9981;MQ=56.56;MQ0=23;MQRankSum=-4.392;QD=22.53;ReadPosRankSum=-2.060;VQSLOD=1.4688;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:15:17.01:133,17,0	1/1:9,0:9:27.03:329,27,0	0/0:32,0:24:66.05:0,66,666	0/0:55,0:25:54.17:0,54,605	1/1:19,1:20:32.85:427,33,0	0/0:22,0:22:56.96:0,57,489	0/0:19,0:18:44.92:0,45,376	1/1:39,0:32:71.90:637,72,0	1/1:20,0:20:59.51:657,60,0	1/1:28,0:28:69.95:753,70,0	1/1:16,0:16:36.88:425,37,0	0/0:18,0:18:47.39:0,47,448	0/0:18,0:17:44.87:0,45,379	0/0:15,0:15:38.98:0,39,339	1/1:34,0:33:75.25:831,75,0	1/1:17,1:17:45.12:646,45,0	1/1:14,0:14:35.53:172,36,0	1/1:18,0:15:36.10:527,36,0	1/1:19,2:20:56.56:526,57,0	1/1:29,0:28:77.46:604,77,0	1/1:19,0:20:29.45:298,29,0	0/0:21,0:21:47.90:0,48,413	0/0:17,0:17:47.84:0,48,455	0/0:32,0:28:59.17:0,59,531	1/1:26,0:26:62.08:628,62,0	1/1:30,0:29:59.83:538,60,0	1/1:30,1:30:71.21:672,71,0	1/1:17,0:17:39.02:413,39,0
chr10	93977454	.	ATAGG	A	8442.26	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=11.120;DP=639;FS=11.539;HRun=0;HaplotypeScore=169.0689;InbreedingCoeff=0.9199;MQ=60.58;MQ0=0;MQRankSum=-3.018;QD=22.63;ReadPosRankSum=3.790;VQSLOD=3.5118;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:26:2.12:2,0,462	1/1:3,8:11:21.07:350,21,0	0/0:39,0:30:17.65:0,18,303	0/0:23,0:18:19.46:0,19,243	1/1:4,10:13:14.77:238,15,0	0/0:28,0:28:60.17:0,60,1470	0/0:20,0:20:36.12:0,36,828	1/1:12,15:27:45:497,45,0	1/1:11,11:22:48.10:767,48,0	1/1:10,20:30:61.01:918,61,0	1/1:9,7:16:5.07:98,5,0	0/0:20,0:20:54.08:0,54,1095	0/0:30,0:30:78.22:0,78,1692	0/0:23,0:23:54.17:0,54,1191	1/1:8,22:30:32.60:827,33,0	1/1:8,15:23:35.10:710,35,0	0/0:12,0:14:15.37:0,15,147	1/1:6,8:13:21.07:349,21,0	1/1:8,2:9:8.83:110,9,0	1/1:13,16:28:23.82:362,24,0	1/1:12,13:25:23.72:399,24,0	0/0:20,0:20:41.97:0,42,839	0/0:20,0:20:39.08:0,39,795	0/0:29,0:28:69.16:0,69,1453	1/1:2,20:22:30.10:499,30,0	1/1:14,14:28:54.14:854,54,0	1/1:13,18:30:49.21:881,49,0	1/1:4,11:15:20.74:581,21,0
chr10	93977509	.	GTAGA	G	3197.28	PASS	AB=0.916;AC=24;AF=0.429;AN=56;BaseQRankSum=10.854;DP=660;FS=6.571;HRun=0;HaplotypeScore=163.0164;InbreedingCoeff=0.1282;MQ=48.70;MQ0=9;MQRankSum=-7.677;QD=7.47;ReadPosRankSum=-0.877;VQSLOD=2.4036;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,2:29:38.20:38,0,654	1/1:5,3:8:16.01:178,16,0	0/0:27,0:7:14.76:0,15,145	0/0:20,0:7:17.54:0,18,241	1/1:21,1:22:10.34:73,10,0	0/0:18,0:18:32.08:0,32,907	0/0:22,0:22:63.16:0,63,1325	0/1:48,1:43:99:335,0,1008	1/1:20,2:22:22.09:225,22,0	0/1:24,6:29:99:482,0,136	1/1:8,2:10:7.15:78,7,0	0/0:22,0:22:51.06:0,51,1002	0/0:39,0:39:99:0,111,2119	0/0:24,0:24:56.82:0,57,1217	1/1:18,5:23:24.93:326,25,0	1/1:23,4:27:59.40:536,59,0	0/1:14,1:15:76.32:76,0,509	0/1:15,1:16:2.53:117,0,3	0/1:19,1:18:99:123,0,716	0/1:21,3:24:77.56:78,0,636	0/1:38,0:38:99:113,0,705	0/0:13,0:13:39.11:0,39,819	0/0:19,0:19:51.12:0,51,1027	0/0:28,0:27:69.19:0,69,1490	0/1:13,5:18:52.73:54,0,53	0/1:24,2:26:99:260,0,740	0/1:31,5:35:99:210,0,780	0/1:13,1:14:86.15:86,0,615
chr10	93977513	.	A	ATAGGTAGG	4645.82	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=12.875;DP=658;FS=1.132;HRun=0;HaplotypeScore=200.5669;InbreedingCoeff=0.1425;MQ=48.35;MQ0=11;MQRankSum=-8.003;QD=10.93;ReadPosRankSum=-1.471;VQSLOD=3.5184;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:26:30.42:30,0,544	1/1:7,0:7:16.28:265,16,0	0/0:26,0:6:14.76:0,15,160	0/0:23,0:8:16.86:0,17,293	1/1:12,11:23:10.50:73,11,0	0/0:20,0:20:34.19:0,34,1045	0/0:22,0:22:66.15:0,66,1453	0/1:49,0:43:99:240,0,1114	1/1:13,6:20:35.32:309,35,0	0/1:31,0:30:53.24:685,0,53	1/1:8,0:8:7.04:78,7,0	0/0:20,0:20:51.06:0,51,1124	0/0:39,0:39:99:0,111,2383	0/0:22,0:22:57.05:0,57,1408	1/1:23,0:23:29.43:482,29,0	1/1:27,1:28:39.88:871,40,0	0/1:15,0:15:58.39:58,0,474	1/1:18,0:18:0.48:213,0,0	0/1:20,0:18:99:103,0,600	0/1:23,0:23:51.63:52,0,567	0/1:36,0:36:99:186,0,518	0/0:14,0:14:42.09:0,42,933	0/0:19,0:19:51.12:0,51,1107	0/0:28,0:27:69.19:0,69,1671	0/1:19,0:19:62.66:63,0,77	0/1:29,0:29:99:289,0,559	0/1:33,0:32:99:550,0,662	0/1:16,0:16:99:99,0,534
chr10	93977525	.	GTAGA	G	4031.58	PASS	AB=0.833;AC=18;AF=0.321;AN=56;BaseQRankSum=6.526;DP=654;FS=5.359;HRun=0;HaplotypeScore=143.1953;InbreedingCoeff=0.6294;MQ=47.74;MQ0=13;MQRankSum=-3.996;QD=17.68;ReadPosRankSum=-1.998;VQSLOD=2.9007;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:32.85:0,33,818	1/1:6,2:8:21.75:280,22,0	0/0:27,0:3:5.70:0,6,32	0/0:22,0:6:11.97:0,12,109	0/1:16,6:22:11.96:133,0,12	0/0:18,0:18:41.99:0,42,670	0/0:28,0:28:81.06:0,81,1247	0/0:47,0:41:72.97:0,73,1178	1/1:13,6:19:38.89:494,39,0	1/1:30,5:35:84.45:986,84,0	1/1:8,0:8:8.89:120,9,0	0/0:21,0:21:53.91:0,54,865	0/0:37,0:37:84.16:0,84,1499	0/0:22,0:22:62.83:0,63,875	1/1:23,5:28:63.48:799,63,0	1/1:15,5:20:19.75:533,20,0	0/0:15,0:15:11.93:0,12,762	0/1:4,11:15:6.66:114,0,7	0/0:19,0:16:1.47:0,1,748	0/0:18,0:18:31.48:0,31,642	0/0:39,0:39:15.49:0,15,1097	0/0:16,0:16:42.08:0,42,653	0/0:19,0:19:48.14:0,48,978	0/0:24,0:23:60.08:0,60,1084	1/1:21,1:22:42.38:526,42,0	0/0:28,0:28:29.35:0,29,1219	0/1:32,1:32:33.08:33,0,1094	0/1:18,0:18:14.03:14,0,863
chr10	93978360	.	TA	T	7745.90	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=4.684;DP=471;FS=18.714;HRun=6;HaplotypeScore=109.1580;InbreedingCoeff=0.9741;MQ=59.15;MQ0=8;MQRankSum=-6.556;QD=23.91;ReadPosRankSum=0.240;VQSLOD=3.2397;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:26:65.45:561,65,0	1/1:0,9:9:27.07:287,27,0	0/0:14,0:8:8.92:0,9,94	0/0:18,0:8:14.43:0,14,117	1/1:3,19:22:59.77:555,60,0	0/0:11,0:11:24.08:0,24,308	0/0:14,0:14:36.10:0,36,450	1/1:6,22:28:69.04:700,69,0	1/1:4,9:13:29.86:266,30,0	1/1:3,24:27:72.09:731,72,0	1/1:3,19:22:56.90:553,57,0	0/0:17,0:17:42.08:0,42,503	0/0:15,0:15:35.83:0,36,375	0/0:11,0:11:27.07:0,27,331	1/1:5,12:17:42.02:414,42,0	1/1:2,9:11:30.06:309,30,0	1/1:7,13:17:38.36:307,38,0	1/1:1,13:14:36.03:364,36,0	1/1:1,23:24:66.16:702,66,0	1/1:4,14:17:41.94:400,42,0	1/1:3,6:6:11.92:113,12,0	0/0:18,0:18:48.09:0,48,598	0/0:16,0:16:39.11:0,39,491	0/0:13,0:12:30.10:0,30,382	1/1:6,8:14:29.81:285,30,0	1/1:1,21:22:60.12:629,60,0	1/1:4,14:18:48:474,48,0	1/1:3,6:9:9.02:97,9,0
chr10	93978367	.	T	TTGTG	3812.17	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-9.589;DP=486;FS=1.244;HRun=0;HaplotypeScore=167.9342;InbreedingCoeff=0.8953;MQ=54.44;MQ0=11;MQRankSum=8.004;QD=20.39;ReadPosRankSum=0.928;VQSLOD=3.6521;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:12.01:195,12,0	0/0:9,0:9:18.02:0,18,168	0/0:12,0:6:6.02:0,6,91	0/0:20,0:9:5.83:0,6,33	0/0:20,0:20:27.02:0,27,245	1/1:6,7:14:12.04:287,12,0	1/1:9,5:16:14.78:265,15,0	0/0:28,0:27:21:0,21,187	0/0:12,0:12:18.02:0,18,167	0/0:26,0:26:42.05:0,42,389	0/0:19,0:19:26.62:0,27,218	1/1:9,7:17:23.55:449,24,0	1/1:6,7:15:21.07:487,21,0	1/1:4,3:11:17.80:331,18,0	0/0:15,0:15:24.03:0,24,222	0/0:11,0:11:24.03:0,24,223	1/1:22,0:21:15.05:271,15,0	0/0:15,0:15:9:0,9,84	0/0:22,0:22:21.02:0,21,195	0/0:19,0:19:30.03:0,30,278	0/0:9,0:6:6.01:0,6,56	1/1:10,6:17:17.80:371,18,0	1/1:8,10:20:29.96:712,30,0	1/1:5,8:14:20.81:443,21,0	0/0:11,0:11:20.89:0,21,181	0/0:22,0:21:18.02:0,18,167	0/0:22,0:22:36.03:0,36,331	0/0:6,0:6:3:0,3,28
chr10	93978394	.	TGTGTGC	T	3651.99	PASS	AB=0.978;AC=26;AF=0.464;AN=56;BaseQRankSum=10.704;DP=458;FS=3.072;HRun=0;HaplotypeScore=163.9950;InbreedingCoeff=0.5461;MQ=57.95;MQ0=6;MQRankSum=-11.284;QD=15.88;ReadPosRankSum=4.221;VQSLOD=3.2440;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:42.04:0,42,852	1/1:10,0:10:2.74:136,3,0	0/0:19,0:12:33.88:0,34,502	0/0:22,0:18:46.94:0,47,778	1/1:18,0:18:27.37:231,27,0	0/0:18,0:18:35.89:0,36,620	0/0:14,0:14:26.98:0,27,533	0/1:24,0:22:9.98:318,0,10	0/1:14,1:15:10.84:198,0,11	1/1:19,2:21:6.80:475,7,0	0/1:12,1:13:35.59:222,0,36	0/0:17,0:16:33.03:0,33,779	0/0:12,0:12:24.07:0,24,616	0/0:12,0:12:30.05:0,30,672	1/1:11,0:11:26.95:247,27,0	1/1:9,1:10:24.01:257,24,0	0/0:23,0:20:26.85:0,27,502	0/1:10,0:10:54.56:130,0,55	1/1:15,1:15:37.26:373,37,0	1/1:24,0:23:27.45:199,27,0	0/1:17,0:14:46.03:88,0,46	0/0:18,0:18:44.93:0,45,778	0/0:18,0:18:32.39:0,32,861	0/0:21,0:20:39.02:0,39,851	1/1:9,0:9:20.98:178,21,0	1/1:11,1:11:14.03:267,14,0	1/1:16,1:17:31.41:315,31,0	0/1:3,0:3:9.84:17,0,10
chr10	93978396	.	TGTGC	T	7484.19	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=9.103;DP=454;FS=6.726;HRun=0;HaplotypeScore=136.6106;InbreedingCoeff=0.9610;MQ=60.45;MQ0=6;MQRankSum=-11.946;QD=33.26;ReadPosRankSum=4.041;VQSLOD=4.7307;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:41.98:0,42,596	1/1:4,5:9:23.68:347,24,0	0/0:20,0:13:35.02:0,35,426	0/0:23,0:19:43.08:0,43,601	1/1:7,10:17:29.69:550,30,0	0/0:18,0:18:35.85:0,36,453	0/0:14,0:14:29.94:0,30,423	1/1:17,7:22:56.80:677,57,0	1/1:9,6:15:29.18:407,29,0	1/1:9,12:21:54.01:855,54,0	1/1:4,8:12:35.88:556,36,0	0/0:17,0:16:33.03:0,33,568	0/0:12,0:12:26.86:0,27,453	0/0:11,0:11:30.04:0,30,474	1/1:2,9:11:26.96:483,27,0	1/1:1,9:10:24.08:451,24,0	0/0:22,0:19:26.81:0,27,357	1/1:6,3:9:4.05:248,4,0	1/1:10,6:15:44.95:580,45,0	1/1:4,18:21:30.10:534,30,0	1/1:15,2:14:24.64:235,25,0	0/0:19,0:19:50.79:0,51,615	0/0:19,0:19:35.15:0,35,630	0/0:21,0:20:39.02:0,39,643	1/1:1,8:9:21.07:407,21,0	1/1:8,5:12:32.90:439,33,0	1/1:3,14:17:35.86:639,36,0	1/1:2,1:3:5.46:77,5,0
chr10	93979003	.	GA	G	5208.80	PASS	AB=0.921;AC=34;AF=0.607;AN=56;BaseQRankSum=10.123;DP=541;FS=0.727;HRun=11;HaplotypeScore=56.3805;InbreedingCoeff=0.8295;MQ=72.50;MQ0=0;MQRankSum=-0.146;QD=16.54;ReadPosRankSum=2.161;VQSLOD=5.6996;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,2:51:95.07:0,95,1414	1/1:2,13:15:35.95:296,36,0	0/1:15,1:16:3.09:3,0,144	0/0:6,1:6:10.26:0,10,87	1/1:3,15:18:38.94:320,39,0	0/0:21,0:21:51.09:0,51,531	0/0:25,1:26:38.49:0,38,599	1/1:4,15:19:38.92:320,39,0	1/1:2,19:21:44.94:369,45,0	1/1:2,16:18:47.94:394,48,0	1/1:4,12:15:32.95:271,33,0	0/0:21,0:21:57.06:0,57,577	0/0:10,0:10:21.05:0,21,224	0/0:9,1:10:2.42:0,2,225	1/1:3,18:21:44.21:368,44,0	1/1:1,12:14:32:252,32,0	0/0:38,3:41:34.28:0,34,961	1/1:1,13:15:32:252,32,0	1/1:7,12:18:3.95:238,4,0	1/1:4,19:23:50.92:419,51,0	1/1:0,21:21:53.94:443,54,0	0/1:16,2:18:7.18:7,0,342	0/0:21,0:21:50.98:0,51,519	0/0:18,0:18:42.11:0,42,448	1/1:1,12:13:29.96:246,30,0	1/1:3,19:22:50.93:419,51,0	1/1:0,19:19:56.94:468,57,0	1/1:1,6:7:14.98:123,15,0
chr10	93980000	.	GTA	G	3165.12	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=7.777;DP=487;FS=15.683;HRun=0;HaplotypeScore=101.4710;InbreedingCoeff=0.0981;MQ=48.62;MQ0=29;MQRankSum=0.925;QD=7.59;ReadPosRankSum=-1.236;VQSLOD=2.1635;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:26.14:237,0,26	1/1:3,0:3:5.95:43,6,0	0/1:27,0:10:39.99:40,0,59	0/1:23,0:8:18.11:18,0,76	0/1:11,0:11:0.04:0,0,0	0/1:21,0:20:0.61:1,0,264	0/1:18,0:16:32.46:32,0,84	0/1:15,0:13:36.84:83,0,37	1/1:17,0:16:31.96:229,32,0	0/1:12,0:11:43.58:121,0,44	0/0:14,0:13:2.68:0,3,11	0/0:16,5:20:14.63:0,15,208	0/1:16,0:15:44.69:45,0,133	0/0:13,0:13:14.70:0,15,102	0/1:12,0:11:26:78,0,26	1/1:19,0:19:32.41:252,32,0	1/1:28,0:26:68.23:523,68,0	1/1:13,0:11:18.22:171,18,0	1/1:18,0:16:31.73:303,32,0	1/1:11,0:11:8.88:58,9,0	1/1:38,0:35:74.59:601,75,0	0/0:22,0:21:21.41:0,21,217	0/1:16,0:16:42.15:42,0,58	0/1:24,0:24:18.18:18,0,154	1/1:9,0:8:11.89:90,12,0	1/1:11,0:9:17.79:129,18,0	1/1:17,0:16:16.11:112,16,0	1/1:9,0:6:15.80:114,16,0
chr10	93980002	.	ATGTGTG	A	4992.37	PASS	AB=0.593;AC=34;AF=0.607;AN=56;BaseQRankSum=1.047;DP=488;FS=12.795;HRun=0;HaplotypeScore=119.9772;InbreedingCoeff=0.8694;MQ=50.40;MQ0=27;MQRankSum=0.190;QD=17.58;ReadPosRankSum=1.414;VQSLOD=3.8866;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:41.09:652,41,0	1/1:4,0:4:9.03:125,9,0	0/0:28,0:12:10.01:0,10,220	0/0:27,0:12:34.85:0,35,395	0/1:2,9:11:0:0,0,0	0/0:21,0:20:36.12:0,36,780	0/0:17,0:16:19.94:0,20,285	1/1:8,7:13:21.04:276,21,0	1/1:17,0:16:18.06:289,18,0	1/1:5,6:10:14.99:210,15,0	0/1:6,8:13:0:0,0,0	0/0:20,0:19:33.11:0,33,544	0/0:15,0:14:32.91:0,33,542	0/0:13,0:13:15.05:0,15,269	1/1:11,0:10:12.04:195,12,0	1/1:19,0:19:29.95:488,30,0	1/1:28,0:26:47.65:686,48,0	1/1:13,0:11:12.04:184,12,0	1/1:18,0:16:24.08:394,24,0	1/1:3,8:11:3.01:61,3,0	1/1:37,0:35:50.36:770,50,0	0/0:21,0:20:20.90:0,21,427	0/0:14,0:14:17.43:0,17,193	0/0:25,0:25:34.96:0,35,587	1/1:8,0:8:9.03:147,9,0	1/1:4,8:10:18.04:231,18,0	1/1:15,0:14:9.03:142,9,0	1/1:10,0:7:11.76:143,12,0
chr10	93981997	.	TACCACC	T	3077.53	PASS	AC=34;AF=0.630;AN=54;BaseQRankSum=8.642;DP=431;FS=54.635;HRun=0;HaplotypeScore=109.7496;InbreedingCoeff=0.8479;MQ=59.00;MQ0=3;MQRankSum=-4.217;QD=14.94;ReadPosRankSum=1.452;VQSLOD=1.0097;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,15:24:15.05:295,15,0	1/1:3,1:4:6.02:112,6,0	0/0:30,0:24:27.87:0,28,660	0/0:26,0:19:30.10:0,30,818	1/1:6,2:8:6.75:129,7,0	0/0:19,0:18:33.04:0,33,912	0/0:28,0:28:51.14:0,51,1467	1/1:14,0:14:15.01:164,15,0	1/1:10,9:18:9.03:182,9,0	1/1:2,6:8:18:281,18,0	1/1:5,12:16:24.04:446,24,0	0/0:21,0:21:57.15:0,57,1523	0/0:12,0:12:27.09:0,27,855	0/0:22,0:22:42.07:0,42,1109	1/1:5,3:8:3.01:64,3,0	1/1:3,8:11:11.56:254,12,0	1/1:10,0:11:9.94:99,10,0	1/1:3,3:6:3.01:58,3,0	1/1:7,1:8:2.94:64,3,0	1/1:2,7:9:15.05:310,15,0	1/1:29,0:29:9.95:98,10,0	0/0:13,0:13:36.12:0,36,1130	0/0:12,0:11:21.07:0,21,639	0/0:40,0:40:99:0,99,3137	1/1:3,5:8:12.04:238,12,0	1/1:9,2:11:15.48:222,15,0	1/1:11,0:11:14.57:268,15,0	./.
chr10	93982014	.	CCACCACCTT	C	2744.17	PASS	AB=1.000;AC=30;AF=0.556;AN=54;BaseQRankSum=6.885;DP=403;FS=42.579;HRun=0;HaplotypeScore=135.9428;InbreedingCoeff=0.6823;MQ=48.85;MQ0=8;MQRankSum=-4.958;QD=14.07;ReadPosRankSum=-0.886;VQSLOD=1.1124;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:24:5.50:117,0,5	1/1:3,0:3:5.48:124,5,0	0/0:29,0:15:27.92:0,28,594	0/0:23,0:12:35.95:0,36,730	1/1:4,5:9:7.92:145,8,0	0/0:16,0:15:45.15:0,45,1248	0/0:26,0:26:66.16:0,66,2125	0/1:14,0:13:8.47:244,0,8	1/1:14,0:13:21.74:176,22,0	1/1:7,0:6:17.99:197,18,0	1/1:13,0:12:23.92:321,24,0	0/0:22,0:22:63.18:0,63,1767	0/0:12,0:12:33.11:0,33,1276	0/0:15,0:15:42.08:0,42,1352	1/1:5,0:5:5.82:35,6,0	1/1:12,0:12:23.32:194,23,0	1/1:14,0:14:11.48:198,11,0	0/1:7,0:7:25.07:34,0,25	1/1:3,2:5:13.18:132,13,0	1/1:9,0:8:14.85:152,15,0	1/1:36,0:36:15.27:203,15,0	0/0:17,0:17:45.10:0,45,1520	0/0:11,0:8:21.02:0,21,899	0/0:37,0:37:97.59:0,98,4162	1/1:6,0:6:11.82:80,12,0	0/1:9,0:9:4.38:319,0,4	1/1:7,0:7:18:279,18,0	./.
chr10	93982042	.	T	TTCC	119.57	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=2.557;DP=448;FS=5.525;HRun=0;HaplotypeScore=126.3033;InbreedingCoeff=0.1554;MQ=45.95;MQ0=10;MQRankSum=-2.647;QD=1.34;ReadPosRankSum=-6.148;VQSLOD=-0.3869;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:46.75:0,47,510	0/1:5,0:5:28.97:29,0,33	0/0:25,0:1:2.98:0,3,22	0/0:24,0:5:8.83:0,9,63	0/1:9,0:9:4.97:13,0,5	0/0:12,0:11:29.97:0,30,274	0/0:25,0:24:12.02:0,12,388	0/1:20,0:18:34.08:34,0,156	0/0:15,0:14:3.18:0,3,75	0/0:9,0:8:10.97:0,11,76	0/0:16,0:16:17.80:0,18,109	0/0:20,0:20:50.97:0,51,473	0/0:19,0:19:54.03:0,54,567	0/0:18,0:18:39.05:0,39,423	0/0:5,0:5:5.79:0,6,48	0/1:14,0:14:21.53:22,0,103	1/1:3,8:11:6.02:107,6,0	0/0:7,0:7:6.76:0,7,31	0/0:9,0:7:6.89:0,7,49	0/0:10,0:10:11.70:0,12,77	0/0:37,0:37:2.30:0,2,108	0/0:20,0:19:35.71:0,36,310	0/0:17,0:14:38.47:0,38,334	0/0:38,0:38:59.51:0,60,874	0/1:9,0:9:0.07:0,0,35	0/1:13,0:13:24.20:24,0,42	0/1:5,0:5:0:0,0,0	1/1:1,0:1:2.98:22,3,0
chr10	93982043	.	TCCA	T	1546.82	PASS	AB=0.908;AC=26;AF=0.464;AN=56;BaseQRankSum=6.775;DP=457;FS=8.658;HRun=0;HaplotypeScore=118.2919;InbreedingCoeff=0.1053;MQ=45.89;MQ0=9;MQRankSum=-6.058;QD=5.75;ReadPosRankSum=-4.421;VQSLOD=0.2636;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:37.96:0,38,565	0/1:4,1:5:2.02:81,0,2	0/0:25,0:1:2.96:0,3,19	0/0:23,0:5:11.73:0,12,109	1/1:6,3:9:4.28:50,4,0	0/0:12,0:11:18.72:0,19,290	0/1:22,1:22:73.48:73,0,471	0/1:20,0:18:79.96:80,0,133	1/1:11,5:15:29.47:243,29,0	0/1:10,1:10:11.91:82,0,12	1/1:14,2:16:9.49:125,9,0	0/1:20,0:20:22.82:23,0,424	0/0:18,0:18:54.12:0,54,675	0/0:18,0:18:23.54:0,24,535	0/1:5,2:7:11.17:58,0,11	0/1:11,4:15:11.85:163,0,12	1/1:13,1:12:3.86:23,4,0	1/1:7,0:7:11.63:91,12,0	0/1:8,2:8:1.85:108,0,2	0/1:9,1:10:12.87:56,0,13	0/1:39,1:40:49.24:141,0,49	0/1:19,0:18:30.50:30,0,309	0/0:17,0:14:38.58:0,39,401	0/0:40,0:40:43.21:0,43,1165	0/1:8,1:9:6.24:18,0,6	1/1:10,3:13:11.99:235,12,0	1/1:5,0:5:5.54:41,6,0	0/0:1,0:1:0.47:0,0,1
chr10	93982051	.	CTCCTCT	C	2318.26	PASS	AB=0.901;AC=24;AF=0.429;AN=56;BaseQRankSum=9.491;DP=481;FS=1.441;HRun=0;HaplotypeScore=145.9509;InbreedingCoeff=0.1012;MQ=49.28;MQ0=7;MQRankSum=-5.995;QD=9.31;ReadPosRankSum=0.048;VQSLOD=2.8784;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:72.19:0,72,1908	0/1:3,1:4:19.32:109,0,19	0/1:31,0:1:0:0,0,0	0/0:25,0:8:14.79:0,15,254	0/1:8,3:11:1.83:51,0,2	0/0:16,0:16:48.09:0,48,1048	0/0:21,0:20:49.38:0,49,1346	0/1:20,0:19:43.99:44,0,169	1/1:12,5:16:39.23:426,39,0	0/1:9,1:10:31.14:215,0,31	0/1:14,2:16:23.59:179,0,24	0/0:21,0:21:57.09:0,57,1507	0/0:21,0:21:63.20:0,63,1641	0/0:19,0:19:48.16:0,48,1359	0/1:7,2:9:18.97:122,0,19	0/1:13,4:17:41.40:284,0,41	0/1:12,0:10:37.99:62,0,38	1/1:7,0:7:3.64:60,4,0	1/1:9,2:9:3.80:223,4,0	0/1:11,1:12:48.13:82,0,48	0/1:36,1:37:42.61:171,0,43	0/0:19,0:18:39.10:0,39,971	0/0:18,0:16:45.14:0,45,1087	0/0:38,0:38:99:0,108,3052	0/1:9,1:10:19.74:20,0,64	1/1:14,3:17:17.56:381,18,0	1/1:6,0:6:1.04:31,1,0	1/1:2,0:2:5.36:32,5,0
chr10	93982054	.	CTCT	C	1931.01	PASS	AB=0.992;AC=23;AF=0.411;AN=56;BaseQRankSum=6.362;DP=477;FS=12.316;HRun=0;HaplotypeScore=121.7869;InbreedingCoeff=0.1591;MQ=49.61;MQ0=10;MQRankSum=-5.750;QD=9.02;ReadPosRankSum=-2.773;VQSLOD=2.1207;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:75.17:0,75,1439	0/1:6,0:6:2.06:103,0,2	0/0:34,0:1:0:0,0,0	0/0:27,0:7:14.83:0,15,211	1/1:11,0:11:20.29:159,20,0	0/0:16,0:16:48.02:0,48,747	0/0:20,0:19:42.63:0,43,1011	0/1:20,0:19:79.72:80,0,147	1/1:14,0:14:28.32:256,28,0	0/1:10,0:10:47.91:71,0,48	1/1:15,0:15:1.28:179,1,0	0/0:20,0:20:52.20:0,52,1074	0/0:21,0:21:62.38:0,62,1155	0/0:20,0:19:48.10:0,48,948	0/1:9,0:9:21.22:63,0,21	0/1:17,0:17:45:171,0,45	0/1:9,1:10:12.70:13,0,56	0/1:7,0:7:19.73:48,0,20	0/1:11,0:9:4.86:100,0,5	0/1:11,0:11:30.83:83,0,31	0/1:36,0:36:42.45:230,0,42	0/0:15,0:14:39.10:0,39,757	0/0:17,0:16:45.08:0,45,824	0/0:38,0:38:99:0,108,2212	0/1:10,0:10:32.67:114,0,33	1/1:4,14:18:26.64:335,27,0	1/1:7,0:7:11.47:81,11,0	1/1:2,0:2:2.99:24,3,0
chr10	93982562	.	C	CCAT	22770.10	PASS	AB=0.564;AC=35;AF=0.625;AN=56;BaseQRankSum=-14.477;DP=710;FS=0.672;HRun=0;HaplotypeScore=75.1507;InbreedingCoeff=0.9194;MQ=57.48;MQ0=3;MQRankSum=-0.847;QD=48.45;ReadPosRankSum=0.913;VQSLOD=6.5345;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:29:54.19:1203,54,0	1/1:1,5:6:15.05:335,15,0	0/0:30,0:15:39.04:0,39,558	0/0:24,0:18:39.13:0,39,610	1/1:6,19:25:51.11:1084,51,0	0/0:33,0:33:81.28:0,81,1323	0/0:25,0:25:51.17:0,51,832	1/1:13,32:39:53.26:1861,53,0	1/1:6,20:27:60.20:1308,60,0	1/1:5,31:35:99:2151,99,0	1/1:3,23:25:63.22:1404,63,0	0/0:19,0:19:51.17:0,51,832	0/0:24,0:24:66.20:0,66,1050	0/0:21,0:21:48.15:0,48,758	1/1:3,26:29:75.26:1670,75,0	1/1:5,17:22:57.19:1214,57,0	1/1:3,28:32:75.26:1666,75,0	1/1:4,9:14:23.87:468,24,0	0/1:7,23:28:22.64:1374,0,23	1/1:5,21:28:60.14:1248,60,0	1/1:1,17:17:42.14:937,42,0	0/0:23,0:23:66.21:0,66,1054	0/0:22,0:22:63.22:0,63,1029	0/0:19,0:19:51.17:0,51,814	1/1:3,22:27:63.22:1381,63,0	1/1:6,24:29:75.20:1626,75,0	1/1:5,27:32:69.24:1508,69,0	1/1:1,7:9:15.05:333,15,0
chr10	93984317	.	T	TTGGCT	2328.30	PASS	AB=0.800;AC=37;AF=0.974;AN=38;BaseQRankSum=-1.677;DP=63;FS=0.000;HRun=0;HaplotypeScore=17.5430;InbreedingCoeff=-0.1309;MQ=108.57;MQ0=0;MQRankSum=-2.038;QD=39.46;ReadPosRankSum=-0.593;VQSLOD=2.8678;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:9.03:154,9,0	./.	1/1:4,1:6:15.04:285,15,0	0/1:6,0:7:37.21:48,0,37	1/1:4,0:4:9.03:231,9,0	1/1:1,0:2:6.02:188,6,0	1/1:1,0:1:2.99:24,3,0	1/1:2,0:2:6.02:111,6,0	1/1:1,0:2:6.02:136,6,0	./.	./.	./.	1/1:2,0:3:8.97:71,9,0	./.	./.	./.	1/1:2,0:2:5.98:113,6,0	./.	1/1:1,0:1:3:26,3,0	1/1:5,0:5:12.03:253,12,0	1/1:3,0:3:3.01:50,3,0	1/1:1,0:1:3:27,3,0	1/1:7,0:7:18.03:271,18,0	1/1:1,0:1:3.01:50,3,0	1/1:4,0:4:12.03:254,12,0	1/1:2,0:2:6.02:98,6,0	1/1:1,0:1:3:25,3,0	./.
chr10	93986361	.	T	TC	438.56	PASS	AB=0.848;AC=6;AF=0.107;AN=56;BaseQRankSum=6.746;DP=598;FS=10.267;HRun=0;HaplotypeScore=71.5844;InbreedingCoeff=-0.1318;MQ=78.49;MQ0=0;MQRankSum=-4.188;QD=3.95;ReadPosRankSum=-3.010;VQSLOD=1.2517;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,4:48:87.92:0,88,1761	0/1:4,1:5:32.44:32,0,153	0/1:16,4:19:99:144,0,416	0/1:18,4:21:86.07:86,0,529	0/0:22,2:24:54.16:0,54,737	0/0:17,1:18:6.36:0,6,646	0/0:17,1:18:6.35:0,6,645	0/1:26,3:27:65.41:65,0,869	0/0:20,0:20:60.20:0,60,839	0/0:33,2:35:9.56:0,10,1255	0/0:11,1:12:30.10:0,30,420	0/0:17,0:17:51.17:0,51,712	0/0:16,0:16:48.16:0,48,671	0/0:24,0:24:69.22:0,69,945	0/0:22,0:22:66.22:0,66,923	0/0:19,0:19:54.17:0,54,738	0/0:33,0:33:99:0,99,1383	0/0:23,0:23:66.22:0,66,920	0/1:17,8:24:99:217,0,628	0/1:9,1:10:17.78:18,0,348	0/0:31,3:34:93.29:0,93,1283	0/0:15,0:15:45.15:0,45,628	0/0:17,1:18:42.14:0,42,587	0/0:27,0:27:81.23:0,81,1111	0/0:23,0:22:60.20:0,60,839	0/0:24,1:25:25.02:0,25,883	0/0:12,0:12:33.11:0,33,462	0/0:4,0:4:12.04:0,12,168
chr10	93986636	.	T	TC	8854.44	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-11.043;DP=548;FS=1.657;HRun=6;HaplotypeScore=55.3783;InbreedingCoeff=0.9812;MQ=71.06;MQ0=2;MQRankSum=-0.560;QD=27.16;ReadPosRankSum=1.901;VQSLOD=5.3425;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,33:38:56.66:1025,57,0	1/1:1,5:6:9.03:111,9,0	0/0:23,0:19:20.84:0,21,304	0/0:32,0:25:27.57:0,28,333	1/1:3,10:13:30.10:375,30,0	0/0:20,0:20:54.11:0,54,547	0/0:21,0:21:57.13:0,57,581	1/1:13,13:26:36.05:412,36,0	1/1:3,16:19:39.12:490,39,0	1/1:2,15:17:45.12:549,45,0	1/1:1,11:12:30.10:377,30,0	0/0:24,0:24:60.13:0,60,608	0/0:19,0:19:51.11:0,51,519	0/0:25,0:25:66.58:0,67,664	1/1:4,16:20:39.12:491,39,0	1/1:4,17:21:33.11:415,33,0	1/1:0,26:26:66.21:830,66,0	1/1:5,15:20:38.99:490,39,0	1/1:4,8:12:27.09:338,27,0	1/1:2,19:21:48.11:582,48,0	1/1:1,22:23:57.18:716,57,0	0/0:10,0:10:27.02:0,27,265	0/0:16,0:16:42.09:0,42,428	0/0:30,0:29:66.98:0,67,659	1/1:1,11:12:33.11:415,33,0	1/1:2,16:18:48.15:594,48,0	1/1:1,18:18:44.96:564,45,0	1/1:3,0:3:8.88:78,9,0
chr10	93986828	.	C	CAGCA	2133.06	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.336;DP=695;FS=0.000;HRun=0;HaplotypeScore=110.2824;InbreedingCoeff=0.9433;MQ=71.93;MQ0=0;MQRankSum=-1.404;QD=64.64;ReadPosRankSum=3.913;VQSLOD=5.9442;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,2448	0/0:11,0:11:24.08:0,24,448	0/0:22,0:22:48.16:0,48,863	0/0:24,0:24:57.19:0,57,1033	0/0:26,0:26:75.23:0,75,1335	0/0:27,0:27:72.23:0,72,1303	0/0:21,0:21:54.17:0,54,1004	0/0:27,0:27:69.23:0,69,1254	0/0:29,0:29:75.26:0,75,1399	0/0:27,0:27:72.23:0,72,1278	0/0:13,0:13:36.12:0,36,658	0/0:23,0:23:63.20:0,63,1134	0/0:17,0:17:45.15:0,45,838	0/0:23,0:23:69.24:0,69,1284	0/0:29,0:29:84.26:0,84,1505	0/0:28,0:28:81.26:0,81,1471	1/1:0,31:33:84.29:2228,84,0	0/0:25,0:25:66.23:0,66,1217	0/0:17,0:17:42.11:0,42,719	0/0:31,0:31:84.23:0,84,1485	0/0:39,0:39:99:0,111,2015	0/0:22,0:22:57.18:0,57,1030	0/0:23,0:23:63.19:0,63,1135	0/0:29,0:29:84.29:0,84,1566	0/0:19,0:19:54.14:0,54,972	0/0:32,0:32:93.30:0,93,1674	0/0:28,0:28:81.26:0,81,1471	0/0:3,0:3:9.03:0,9,168
chr10	93987362	.	G	GGGAGGAGGAA	9349.90	PASS	AB=0.956;AC=31;AF=0.554;AN=56;BaseQRankSum=5.180;DP=467;FS=6.885;HRun=0;HaplotypeScore=196.7896;InbreedingCoeff=0.6595;MQ=54.56;MQ0=7;MQRankSum=-8.319;QD=33.63;ReadPosRankSum=-1.096;VQSLOD=3.2169;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:19:45.36:1068,45,0	0/1:8,0:8:4.02:66,0,4	0/0:31,0:19:35.58:0,36,452	0/0:42,0:31:34.83:0,35,525	1/1:14,1:15:14.96:146,15,0	0/0:17,0:17:46.29:0,46,933	0/0:18,0:18:45.09:0,45,970	1/1:29,0:26:46.85:611,47,0	1/1:16,0:16:26.67:851,27,0	0/1:18,1:19:6.34:423,0,6	1/1:6,0:6:3.26:93,3,0	0/0:16,0:16:45.11:0,45,1033	0/0:14,0:14:41.93:0,42,815	0/0:9,0:8:24.06:0,24,571	0/1:18,3:20:7.81:700,0,8	1/1:13,5:18:15.19:1307,15,0	1/1:8,0:8:23.86:198,24,0	0/1:11,0:11:4.05:449,0,4	1/1:6,9:20:56.83:767,57,0	1/1:17,1:16:26.18:370,26,0	0/1:21,1:19:49.37:282,0,49	0/0:14,0:14:34.25:0,34,390	0/0:16,0:16:45.02:0,45,860	0/0:12,0:12:36.04:0,36,672	1/1:16,2:18:8.46:1066,8,0	1/1:4,8:14:23.04:343,23,0	1/1:10,0:10:19.51:390,20,0	1/1:3,2:5:11.90:221,12,0
chr10	93987372	.	G	GGA	1532	PASS	AB=0.935;AC=12;AF=0.214;AN=56;BaseQRankSum=9.032;DP=443;FS=3.116;HRun=0;HaplotypeScore=154.2576;InbreedingCoeff=-0.2777;MQ=50.93;MQ0=7;MQRankSum=-8.164;QD=9.57;ReadPosRankSum=0.119;VQSLOD=3.5605;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:33.20:0,33,418	0/1:7,0:7:40.75:175,0,41	0/0:31,0:20:41.08:0,41,695	0/0:43,0:32:70.88:0,71,945	0/1:12,2:14:65.95:66,0,157	0/0:16,0:16:45.02:0,45,647	0/0:13,0:13:39.13:0,39,597	0/0:30,0:27:57.66:0,58,756	0/1:10,1:11:92.56:93,0,209	0/1:14,5:18:99:294,0,332	0/1:7,0:7:41.13:44,0,41	0/0:15,0:15:45.15:0,45,679	0/0:17,0:17:48.13:0,48,676	0/0:9,0:8:21.07:0,21,322	0/1:12,6:18:99:345,0,202	0/1:16,1:17:99:161,0,391	0/0:7,0:7:21.07:0,21,321	0/1:12,0:12:19.08:205,0,19	0/0:17,0:17:0.43:0,0,334	0/0:15,0:14:8.36:0,8,234	0/1:23,0:21:56.43:56,0,294	0/0:12,0:12:36.12:0,36,541	0/0:14,0:14:42.13:0,42,622	0/0:14,0:14:42.14:0,42,633	0/1:16,1:17:99:182,0,153	0/0:12,0:12:10.04:0,10,219	0/1:10,0:10:55.46:55,0,102	0/1:5,0:5:0.65:1,0,43
chr10	93987375	.	A	AGG	159.25	PASS	AB=0.847;AC=8;AF=0.143;AN=56;BaseQRankSum=5.885;DP=437;FS=4.246;HRun=3;HaplotypeScore=157.4843;InbreedingCoeff=-0.1500;MQ=50.90;MQ0=6;MQRankSum=-5.585;QD=1.58;ReadPosRankSum=-0.019;VQSLOD=-0.2920;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:30.26:0,30,228	0/1:7,0:7:5.44:5,0,29	0/0:30,0:18:33.64:0,34,612	0/0:41,0:31:66.66:0,67,1055	0/0:14,0:14:20.11:0,20,142	0/0:14,0:14:42.06:0,42,651	0/0:15,0:15:42.12:0,42,634	0/0:27,0:24:14.14:0,14,273	0/0:13,0:13:2.40:0,2,137	0/0:20,0:19:45.51:0,46,284	0/0:7,0:7:2.77:0,3,16	0/0:14,0:14:42.14:0,42,684	0/0:16,0:16:48.12:0,48,723	0/0:9,0:8:24.06:0,24,344	0/0:18,0:18:19.85:0,20,144	0/0:18,0:18:42.35:0,42,287	0/0:7,0:7:20.94:0,21,168	0/1:11,2:13:1.60:2,0,99	0/1:11,4:15:88.38:88,0,122	0/1:12,3:14:23.71:24,0,126	0/1:20,2:21:8.66:9,0,137	0/0:12,0:12:36.11:0,36,563	0/0:14,0:14:42.10:0,42,654	0/0:14,0:14:42.14:0,42,684	0/0:16,0:16:21.92:0,22,112	0/1:10,2:12:50.96:51,0,124	0/1:9,3:12:56.67:68,0,57	0/1:3,2:5:12.77:37,0,13
chr10	93987385	.	A	AGAG	2479.64	PASS	AB=0.903;AC=17;AF=0.304;AN=56;BaseQRankSum=7.955;DP=436;FS=7.086;HRun=0;HaplotypeScore=152.8783;InbreedingCoeff=-0.2228;MQ=50.96;MQ0=6;MQRankSum=-8.582;QD=10.12;ReadPosRankSum=0.008;VQSLOD=2.6025;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:26.03:0,26,229	0/1:6,0:6:14.93:62,0,15	0/0:24,0:13:32.86:0,33,431	0/0:35,0:25:52.27:0,52,790	0/1:14,0:14:27.76:28,0,105	0/0:17,0:17:43.33:0,43,658	0/0:10,0:10:30.10:0,30,511	0/1:29,0:27:99:192,0,216	0/1:11,0:11:52.42:79,0,52	0/1:20,0:19:49.17:113,0,49	0/1:6,0:6:9.25:43,0,9	0/0:16,0:16:48.08:0,48,774	0/0:15,0:15:45.15:0,45,759	0/0:8,0:8:24.07:0,24,383	0/1:20,0:20:79.55:171,0,80	0/1:20,0:20:72.12:215,0,72	0/0:10,0:10:3.05:0,3,182	1/1:14,0:16:20.31:233,20,0	0/1:17,4:20:72.98:380,0,73	0/1:11,4:14:65.65:236,0,66	0/1:20,5:24:99:193,0,126	0/0:11,0:11:33.11:0,33,563	0/0:13,0:13:36.11:0,36,584	0/0:17,0:17:51.13:0,51,826	0/1:15,0:15:17.59:67,0,18	0/1:9,3:12:65.57:216,0,66	0/1:4,6:11:3.49:286,0,3	0/1:2,2:4:15.48:130,0,15
chr10	93987397	.	G	GGAA	2035.25	PASS	AB=0.977;AC=19;AF=0.339;AN=56;BaseQRankSum=7.994;DP=425;FS=10.866;HRun=0;HaplotypeScore=146.9838;InbreedingCoeff=-0.3938;MQ=46.97;MQ0=8;MQRankSum=-8.876;QD=7.51;ReadPosRankSum=-0.697;VQSLOD=2.3706;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:17:31.01:31,0,156	0/1:5,0:6:32.53:33,0,83	0/0:21,0:12:10.95:0,11,282	0/0:25,0:18:37.88:0,38,470	0/1:13,0:13:65.20:65,0,129	0/0:16,0:16:44.67:0,45,640	0/0:11,0:11:24:0,24,402	0/1:25,0:22:99:174,0,187	0/1:11,0:11:50.59:51,0,125	0/1:23,0:22:99:187,0,314	0/1:4,0:4:13.86:25,0,14	0/0:14,0:14:42.05:0,42,624	0/0:16,0:16:48.09:0,48,682	0/0:10,0:10:30.05:0,30,402	0/1:18,0:18:62.51:63,0,177	0/1:18,0:18:99:169,0,178	0/1:12,0:12:62.25:62,0,186	0/1:16,0:16:42.27:42,0,345	0/1:22,1:20:99:356,0,142	1/1:11,1:12:2.64:243,3,0	0/1:27,1:27:61.28:61,0,250	0/0:13,0:13:14.32:0,14,485	0/0:11,0:11:33.09:0,33,506	0/0:17,0:17:48.16:0,48,813	0/1:12,0:12:31.20:40,0,31	0/1:13,0:13:99:165,0,166	0/1:12,0:12:19.12:292,0,19	0/1:7,1:8:99:139,0,108
chr10	93987409	.	GGAA	G	536.50	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.761;DP=418;FS=4.983;HRun=0;HaplotypeScore=140.9601;InbreedingCoeff=0.8273;MQ=51.58;MQ0=5;MQRankSum=-3.419;QD=17.88;ReadPosRankSum=2.040;VQSLOD=2.8995;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:16:17.99:270,18,0	0/0:7,0:7:15.03:0,15,217	0/0:21,0:15:26.96:0,27,347	0/0:24,0:19:27.12:0,27,424	0/0:11,0:11:0.40:0,0,217	0/0:17,0:17:45.06:0,45,756	0/0:12,0:12:18.98:0,19,447	0/0:18,0:16:30.08:0,30,503	0/0:12,0:12:25.84:0,26,381	0/0:22,0:22:44.72:0,45,821	0/0:6,0:6:11.94:0,12,96	0/0:12,0:12:30.09:0,30,593	0/0:14,0:14:27.08:0,27,506	0/0:8,0:8:21.03:0,21,385	0/0:18,0:18:38.64:0,39,526	0/0:14,0:14:30.08:0,30,613	1/1:3,11:14:27.01:385,27,0	0/0:16,0:16:37.15:0,37,694	0/0:24,0:21:29.96:0,30,410	0/0:11,0:11:24.03:0,24,292	0/0:29,0:28:47.82:0,48,569	0/0:16,0:16:34.31:0,34,503	0/0:10,0:10:27.08:0,27,503	0/0:19,0:19:54.13:0,54,1005	0/0:10,0:10:9.02:0,9,142	0/0:14,0:14:33.05:0,33,536	0/0:13,0:13:21.02:0,21,309	0/0:10,0:10:29.98:0,30,400
chr10	93987680	.	CT	C	6214.35	PASS	AB=0.665;AC=47;AF=0.839;AN=56;BaseQRankSum=-4.825;DP=551;FS=3.132;HRun=13;HaplotypeScore=64.0209;InbreedingCoeff=0.5015;MQ=74.38;MQ0=0;MQRankSum=-1.980;QD=13.31;ReadPosRankSum=1.708;VQSLOD=5.4293;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:38:57.09:0,57,305	1/1:0,6:6:17.90:131,18,0	0/0:19,0:16:2.94:0,3,92	0/1:12,1:12:6.57:7,0,114	1/1:3,16:20:46.02:333,46,0	1/1:3,15:18:3.61:190,4,0	0/1:5,16:22:40.74:222,0,41	1/1:13,27:41:56.21:555,56,0	1/1:4,13:18:34.83:247,35,0	1/1:10,18:28:21.46:317,21,0	1/1:3,17:22:42.75:293,43,0	1/1:1,11:13:2.37:136,2,0	1/1:2,17:19:6.62:211,7,0	1/1:6,9:15:7.03:117,7,0	0/1:2,8:10:5.31:129,0,5	1/1:1,13:14:29.82:219,30,0	0/0:8,0:27:54.76:0,55,329	1/1:3,7:10:17.86:131,18,0	1/1:3,10:14:28.81:199,29,0	1/1:3,20:23:58.25:405,58,0	1/1:3,16:19:32.78:241,33,0	1/1:2,21:23:53.58:388,54,0	1/1:3,23:26:30.43:387,30,0	1/1:1,12:15:30.92:209,31,0	1/1:2,13:15:26.81:197,27,0	1/1:3,14:19:46.48:319,46,0	1/1:7,24:31:33.45:409,33,0	1/1:0,10:11:31.87:225,32,0
chr10	93999306	.	TA	T	486.71	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=4.290;DP=264;FS=0.932;HRun=6;HaplotypeScore=28.6483;InbreedingCoeff=0.4432;MQ=66.46;MQ0=0;MQRankSum=0.206;QD=22.12;ReadPosRankSum=2.276;VQSLOD=2.1940;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:75.22:0,75,964	0/0:4,0:4:9.03:0,9,118	0/0:1,0:1:2.92:0,3,17	0/0:4,0:4:6.02:0,6,69	0/0:10,0:10:27.09:0,27,351	0/0:18,0:18:54.16:0,54,690	0/0:4,0:4:6.02:0,6,79	0/0:26,0:25:69.22:0,69,899	0/0:6,0:6:18.06:0,18,237	0/0:12,0:12:33.11:0,33,430	0/0:10,0:10:21.07:0,21,274	0/0:7,0:7:21.07:0,21,275	0/0:5,0:5:15.04:0,15,185	0/0:7,0:7:21.04:0,21,246	0/0:3,0:3:6.02:0,6,79	0/0:7,0:7:21.06:0,21,262	1/1:4,18:22:54.13:580,54,0	0/0:13,0:13:36.07:0,36,454	0/0:15,0:15:45.14:0,45,574	0/0:8,0:8:18.05:0,18,222	0/0:1,0:1:3.01:0,3,39	./.	0/0:1,0:1:3.01:0,3,39	0/0:1,0:1:3.01:0,3,39	0/0:16,0:16:42.12:0,42,534	0/0:13,0:13:33.10:0,33,420	0/0:13,0:13:36.12:0,36,469	0/0:11,0:11:33.11:0,33,434
chr10	93999345	.	A	AT	1075.08	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.209;DP=382;FS=4.136;HRun=6;HaplotypeScore=37.4375;InbreedingCoeff=0.7507;MQ=67.79;MQ0=0;MQRankSum=-0.077;QD=34.68;ReadPosRankSum=2.429;VQSLOD=2.9608;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:93.30:1170,93,0	0/0:4,0:4:12.03:0,12,122	0/0:8,0:7:5.97:0,6,48	0/0:3,0:3:6.01:0,6,56	0/0:12,0:12:36.06:0,36,360	0/0:14,0:14:36.08:0,36,367	0/0:6,0:6:12.02:0,12,122	0/0:27,0:27:75.17:0,75,765	0/0:11,0:11:33.07:0,33,336	0/0:17,0:17:45.10:0,45,459	0/0:10,0:10:27.06:0,27,275	0/0:16,0:16:42.09:0,42,428	0/0:16,0:16:48.11:0,48,489	0/0:17,0:17:51.12:0,51,520	0/0:7,0:7:21.05:0,21,214	0/0:17,0:17:51.12:0,51,520	0/0:22,0:22:60.14:0,60,612	0/0:14,0:14:39.06:0,39,388	0/0:14,0:14:36.06:0,36,360	0/0:13,0:13:36.08:0,36,367	0/0:17,0:17:48.08:0,48,480	0/0:9,0:9:27.06:0,27,275	0/0:4,0:4:12.03:0,12,122	0/0:5,0:5:15.03:0,15,153	0/0:19,0:19:51.11:0,51,514	0/0:15,0:15:45.10:0,45,459	0/0:22,0:22:63.10:0,63,632	0/0:12,0:12:36.04:0,36,356
chr10	94000537	.	G	GT	2401.57	PASS	AB=0.588;AC=15;AF=0.268;AN=56;BaseQRankSum=-10.223;DP=453;FS=15.793;HRun=8;HaplotypeScore=43.7853;InbreedingCoeff=0.9289;MQ=78.40;MQ0=0;MQRankSum=0.042;QD=25.82;ReadPosRankSum=1.460;VQSLOD=2.6291;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:65.40:0,65,584	0/0:8,0:8:24.01:0,24,220	0/0:11,1:12:21.01:0,21,191	0/0:9,0:9:19.16:0,19,166	0/0:22,0:22:57:0,57,516	1/1:5,14:20:42.12:485,42,0	0/1:3,6:10:3.56:198,0,4	0/0:22,0:22:57.02:0,57,522	0/0:15,0:15:36.01:0,36,329	0/0:23,0:23:54.02:0,54,494	0/0:15,0:15:36.02:0,36,329	1/1:2,17:19:51.15:586,51,0	1/1:1,7:8:15.04:173,15,0	1/1:1,10:11:30.09:346,30,0	0/0:18,0:18:54.03:0,54,494	0/0:14,0:14:39.02:0,39,357	0/0:32,0:32:87.04:0,87,796	0/0:13,0:13:33.02:0,33,302	0/0:23,0:23:63.03:0,63,576	0/0:16,0:16:48.03:0,48,439	0/0:14,0:14:39.02:0,39,357	1/1:0,7:7:21.06:243,21,0	1/1:2,11:13:36.11:413,36,0	1/1:2,3:5:15.02:157,15,0	0/0:14,0:14:36.01:0,36,330	0/0:21,0:21:51.02:0,51,467	0/0:22,0:22:60.03:0,60,549	0/0:19,0:19:54.02:0,54,494
chr10	94000833	.	TG	T	1949.05	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=9.403;DP=354;FS=4.141;HRun=1;HaplotypeScore=37.1782;InbreedingCoeff=0.9668;MQ=79.59;MQ0=0;MQRankSum=0.683;QD=35.44;ReadPosRankSum=0.810;VQSLOD=3.1727;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:45.13:0,45,694	0/0:13,0:13:39.13:0,39,623	0/0:8,0:8:13.55:0,14,184	0/0:12,0:13:16.81:0,17,240	0/0:20,0:20:60.19:0,60,935	1/1:0,10:10:27.09:378,27,0	1/1:0,4:4:6.02:84,6,0	0/0:29,0:29:87.29:0,87,1363	0/0:15,0:15:45.15:0,45,717	0/0:14,0:14:42.14:0,42,671	0/0:16,0:16:48.16:0,48,767	1/1:0,6:6:15.05:210,15,0	1/1:0,11:11:33.11:462,33,0	1/1:0,6:6:18.06:252,18,0	0/0:16,0:16:48.16:0,48,767	0/0:8,0:8:24.07:0,24,361	0/0:21,0:21:63.19:0,63,982	0/0:9,0:9:27.09:0,27,424	0/0:11,0:11:33.11:0,33,526	0/0:16,0:16:48.16:0,48,767	0/0:6,0:6:18.06:0,18,288	1/1:0,7:7:21.07:294,21,0	1/1:0,11:11:33.11:462,33,0	./.	0/0:16,0:15:48.14:0,48,723	0/0:13,0:13:39.13:0,39,624	0/0:25,0:25:75.26:0,75,1199	0/0:15,0:15:39.11:0,39,598
chr10	94001620	.	TTTCTTTTCTTTTCTTTTCTTTTCTCTTCTC	T	5279.26	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=2.855;DP=542;FS=1.331;HRun=0;HaplotypeScore=220.4255;InbreedingCoeff=0.3044;MQ=57.75;MQ0=27;MQRankSum=2.279;QD=13.71;ReadPosRankSum=4.043;VQSLOD=3.8437;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:3.01:235,3,0	1/1:0,9:9:8.98:293,9,0	0/0:44,0:13:10.79:0,11,129	0/0:68,0:16:17.31:0,17,169	1/1:2,21:23:35.62:294,36,0	0/1:21,0:21:16.22:16,0,64	0/0:13,0:13:35.93:0,36,747	1/1:15,0:14:30.03:278,30,0	1/1:0,20:20:3.01:235,3,0	1/1:3,17:20:47.94:753,48,0	1/1:10,0:10:26.57:180,27,0	0/1:13,0:13:9.68:10,0,22	0/1:15,0:15:20.38:20,0,37	1/1:9,0:9:5.81:31,6,0	1/1:0,21:21:6.02:470,6,0	1/1:0,10:10:2.60:234,3,0	0/0:21,0:21:17.89:0,18,196	1/1:4,0:4:6.67:67,7,0	1/1:14,0:11:23.95:206,24,0	1/1:14,10:24:50.61:497,51,0	1/1:3,0:3:8.81:54,9,0	0/1:17,0:17:65.69:66,0,202	0/1:25,0:25:13.03:13,0,186	0/1:20,0:20:8.29:8,0,13	1/1:2,18:20:3.01:235,3,0	1/1:2,16:18:44.78:616,45,0	1/1:4,24:28:6.02:470,6,0	0/0:10,0:10:2.03:0,2,5
chr10	94001630	.	TTTCTTTTCTTTTCTCTTCTC	T	5909.91	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=-0.090;DP=545;FS=7.168;HRun=0;HaplotypeScore=156.4988;InbreedingCoeff=-0.0379;MQ=51.21;MQ0=28;MQRankSum=0.590;QD=14.17;ReadPosRankSum=1.437;VQSLOD=3.3924;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:3.01:145,3,0	0/1:9,0:9:7.94:175,0,8	0/0:48,0:9:12.36:0,12,146	0/0:80,0:16:14.79:0,15,137	0/1:21,0:21:67.77:118,0,68	1/1:3,20:23:6.02:330,6,0	1/1:13,0:13:25.51:530,26,0	0/1:13,0:12:34.94:35,0,99	1/1:21,0:21:6.02:185,6,0	0/1:17,0:17:99:362,0,130	0/1:12,0:12:90.67:128,0,91	1/1:1,11:12:3.01:165,3,0	1/1:1,14:15:6.02:330,6,0	1/1:0,8:8:6.02:330,6,0	1/1:21,0:21:6.02:290,6,0	1/1:10,0:10:2.65:144,3,0	0/1:21,0:21:18.98:41,0,19	1/1:6,0:6:9.03:135,9,0	0/1:15,0:12:69.33:184,0,69	0/1:21,0:21:99:167,0,130	0/1:3,0:3:7.18:7,0,27	1/1:1,17:18:32.91:513,33,0	1/1:6,22:28:12.27:368,12,0	1/1:2,21:23:3.90:167,4,0	1/1:18,0:18:3.01:145,3,0	1/1:16,0:16:16:458,16,0	1/1:24,0:23:6.02:290,6,0	1/1:4,0:4:12.04:169,12,0
chr10	94001635	.	TTTCTTTTCTCTTCTC	T	5022.43	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-0.705;DP=534;FS=2.506;HRun=0;HaplotypeScore=131.3642;InbreedingCoeff=0.2073;MQ=50.75;MQ0=27;MQRankSum=1.022;QD=12.56;ReadPosRankSum=3.052;VQSLOD=3.7761;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:3.01:110,3,0	1/1:9,0:9:6.02:149,6,0	0/0:53,0:9:14.92:0,15,175	0/0:80,0:16:19.93:0,20,194	1/1:21,0:21:12.01:145,12,0	1/1:20,0:20:6.02:223,6,0	1/1:12,0:12:25.56:305,26,0	1/1:9,0:8:3.01:50,3,0	1/1:21,0:21:6.02:150,6,0	0/1:17,0:17:48.04:339,0,48	1/1:12,0:12:15.05:214,15,0	1/1:11,0:11:3.01:111,3,0	1/1:14,0:14:6.02:223,6,0	1/1:8,0:8:6.02:223,6,0	1/1:21,0:21:6.02:220,6,0	1/1:10,0:10:2.92:110,3,0	1/1:2,20:22:3.01:130,3,0	1/1:6,0:6:12.04:177,12,0	0/1:13,0:11:17.76:245,0,18	0/1:20,0:20:3.81:188,0,4	1/1:3,0:3:2.90:16,3,0	1/1:17,0:17:24.01:351,24,0	1/1:24,0:24:11.21:246,11,0	1/1:23,0:23:5.69:122,6,0	1/1:18,0:18:3.01:110,3,0	1/1:16,0:16:33.05:478,33,0	1/1:24,0:23:6.02:220,6,0	1/1:4,0:4:12.04:169,12,0
chr10	94004435	.	AT	A	7439.72	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=-0.915;DP=285;FS=24.685;HRun=7;HaplotypeScore=32.5372;InbreedingCoeff=0.6079;MQ=62.39;MQ0=0;MQRankSum=-2.980;QD=26.57;ReadPosRankSum=2.094;VQSLOD=2.9574;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:15:39.09:398,39,0	1/1:0,1:1:3.01:31,3,0	0/0:5,0:5:8.98:0,9,74	./.	1/1:0,18:18:51.11:513,51,0	1/1:2,9:11:27.06:275,27,0	1/1:0,10:10:30.07:306,30,0	1/1:2,10:12:27.05:275,27,0	1/1:0,10:10:27.06:275,27,0	1/1:1,17:18:48.10:489,48,0	1/1:0,8:8:24.05:243,24,0	1/1:1,9:10:24.05:245,24,0	1/1:1,12:13:33.07:337,33,0	1/1:0,7:7:21.05:214,21,0	1/1:2,14:16:39.08:393,39,0	1/1:2,2:4:6.01:61,6,0	1/1:0,9:9:24.05:245,24,0	1/1:1,5:6:15.03:153,15,0	1/1:1,12:12:36.08:365,36,0	1/1:1,14:15:39.08:395,39,0	1/1:0,4:4:6.01:61,6,0	1/1:1,11:12:27.06:275,27,0	1/1:0,13:13:36.08:367,36,0	1/1:0,7:7:15.03:153,15,0	1/1:1,9:10:27.05:272,27,0	1/1:1,14:15:42.09:427,42,0	1/1:1,19:20:57.13:579,57,0	1/1:0,3:3:9.02:92,9,0
chr10	94005255	.	AT	A	8825.50	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=3.295;DP=426;FS=34.163;HRun=7;HaplotypeScore=102.5185;InbreedingCoeff=0.8543;MQ=62.24;MQ0=20;MQRankSum=-7.778;QD=22.92;ReadPosRankSum=5.409;VQSLOD=2.8989;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,12:11:21.05:214,21,0	1/1:0,5:5:15.03:153,15,0	0/0:23,0:20:38.96:0,39,514	0/0:18,0:15:17.93:0,18,396	1/1:2,27:28:69.16:702,69,0	1/1:5,20:18:48.11:489,48,0	1/1:1,5:3:9.02:92,9,0	1/1:2,6:5:12.03:122,12,0	1/1:2,11:12:33.07:336,33,0	1/1:2,18:19:54.11:545,54,0	1/1:2,19:21:48.11:488,48,0	1/1:6,6:11:27.03:265,27,0	1/1:0,13:12:36.08:367,36,0	1/1:1,10:9:24.05:245,24,0	1/1:3,11:12:33.07:336,33,0	1/1:1,10:11:30.03:295,30,0	1/1:3,7:9:9.02:92,9,0	1/1:2,6:8:21.01:205,21,0	1/1:4,15:17:42.09:427,42,0	1/1:5,29:32:78.17:795,78,0	1/1:2,4:5:12.03:122,12,0	1/1:3,17:20:48.10:489,48,0	1/1:3,17:20:39.08:395,39,0	1/1:2,4:6:6.01:61,6,0	1/1:4,12:16:39.09:396,39,0	1/1:2,13:15:39.09:398,39,0	1/1:3,17:20:48.11:489,48,0	1/1:0,10:10:30.07:306,30,0
chr10	94005290	.	C	CTG	15664.59	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.136;DP=424;FS=10.016;HRun=0;HaplotypeScore=88.4762;InbreedingCoeff=0.8490;MQ=49.00;MQ0=9;MQRankSum=-5.478;QD=40.79;ReadPosRankSum=3.445;VQSLOD=6.1589;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,11:14:21.07:383,21,0	1/1:2,4:6:9.03:173,9,0	0/0:23,0:19:54.18:0,54,809	0/0:17,0:12:25.92:0,26,434	1/1:2,25:27:57.19:1003,57,0	1/1:3,21:24:60.18:1121,60,0	1/1:2,5:7:15.05:248,15,0	1/1:2,6:9:24.05:425,24,0	1/1:2,16:19:39.13:730,39,0	1/1:1,23:22:66.23:1274,66,0	1/1:1,21:22:57.19:1074,57,0	1/1:1,11:11:30.09:546,30,0	1/1:2,11:13:36.12:689,36,0	1/1:2,8:9:15.05:276,15,0	1/1:0,15:14:30.10:556,30,0	1/1:2,8:9:24.08:418,24,0	1/1:3,7:8:15.05:289,15,0	1/1:0,6:6:18.06:347,18,0	1/1:5,7:9:27.09:507,27,0	1/1:8,23:29:60.20:1005,60,0	1/1:1,1:2:6.02:116,6,0	1/1:2,19:20:48.16:859,48,0	1/1:0,21:21:42.14:786,42,0	1/1:1,6:5:6.02:115,6,0	1/1:0,15:15:36.12:651,36,0	1/1:4,12:17:48.10:832,48,0	1/1:0,16:16:39.13:751,39,0	1/1:1,8:9:27.09:490,27,0
chr10	94014952	.	AT	A	10530.87	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=7.592;DP=601;FS=0.333;HRun=7;HaplotypeScore=64.3767;InbreedingCoeff=0.9950;MQ=82.08;MQ0=0;MQRankSum=-1.887;QD=26.73;ReadPosRankSum=1.906;VQSLOD=5.5559;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:69.16:704,69,0	1/1:1,7:8:12.03:122,12,0	0/0:22,1:23:45.06:0,45,520	0/0:23,0:22:36.38:0,36,520	1/1:2,27:29:75.17:764,75,0	0/0:29,0:29:78.23:0,78,967	0/0:13,0:13:36.12:0,36,453	1/1:2,22:24:66.13:666,66,0	1/1:0,26:26:72.16:734,72,0	1/1:0,24:24:72.15:729,72,0	1/1:0,20:20:60.14:612,60,0	0/0:18,0:18:48.14:0,48,591	0/0:12,0:12:33.10:0,33,408	0/0:14,0:14:36.11:0,36,451	1/1:2,23:25:63.14:641,63,0	1/1:0,24:24:63.13:643,63,0	1/1:2,21:23:57.12:581,57,0	1/1:0,15:15:39.09:398,39,0	1/1:1,22:23:66.13:666,66,0	1/1:2,26:28:78.11:781,78,0	1/1:2,26:28:72.16:734,72,0	0/0:24,0:24:66.19:0,66,804	0/0:32,0:32:90.26:0,90,1100	0/0:19,0:19:51.14:0,51,617	1/1:1,13:14:33.07:336,33,0	1/1:0,24:24:72.15:728,72,0	1/1:2,19:21:45.06:447,45,0	1/1:0,8:8:24.05:245,24,0
chr10	94015362	.	G	GA	10422.42	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-11.457;DP=535;FS=0.364;HRun=8;HaplotypeScore=53.4687;InbreedingCoeff=0.9679;MQ=79.21;MQ0=0;MQRankSum=-0.595;QD=28.55;ReadPosRankSum=-1.040;VQSLOD=4.8310;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:93.28:1073,93,0	1/1:1,6:8:21.06:242,21,0	0/0:17,0:17:4.74:0,5,188	0/0:11,0:11:10.98:0,11,55	1/1:6,25:31:69.20:792,69,0	0/0:16,0:16:48.03:0,48,439	0/0:24,0:24:72.04:0,72,659	1/1:3,28:31:84.24:959,84,0	1/1:2,16:18:45.13:519,45,0	1/1:3,21:24:63.19:727,63,0	1/1:3,20:23:60.12:667,60,0	0/0:16,0:16:39.01:0,39,357	0/0:12,0:12:36.02:0,36,330	0/0:7,0:7:21.01:0,21,192	1/1:2,15:17:36.11:416,36,0	1/1:2,4:6:12.04:138,12,0	1/1:2,18:20:54.16:623,54,0	1/1:2,11:13:33.10:381,33,0	1/1:1,18:19:54.13:601,54,0	1/1:5,21:26:60.18:691,60,0	1/1:1,13:14:21.06:242,21,0	0/0:19,0:19:48.02:0,48,439	0/0:28,0:28:72.03:0,72,658	0/0:20,0:20:57.03:0,57,522	1/1:2,16:18:48.14:554,48,0	1/1:3,22:25:69.20:793,69,0	1/1:3,23:26:57.17:658,57,0	1/1:0,11:11:30.09:346,30,0
chr10	94015750	.	A	AT	13794.76	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.842;DP=502;FS=1.003;HRun=8;HaplotypeScore=46.9220;InbreedingCoeff=0.9662;MQ=75.35;MQ0=0;MQRankSum=-4.277;QD=28.80;ReadPosRankSum=3.865;VQSLOD=4.8993;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:22:40.38:512,40,0	1/1:2,6:8:18.05:207,18,0	0/0:15,0:14:21.61:0,22,193	0/0:8,0:8:15.47:0,15,135	1/1:6,22:28:69.20:794,69,0	1/1:4,21:26:67.27:745,67,0	1/1:1,8:9:21.95:244,22,0	1/1:3,16:19:23.66:515,24,0	1/1:3,21:24:63.19:727,63,0	1/1:5,23:27:69.20:795,69,0	1/1:5,22:27:66.20:762,66,0	1/1:1,13:14:36.11:416,36,0	1/1:2,12:14:39.11:446,39,0	1/1:0,6:6:15.04:173,15,0	1/1:0,10:10:27.08:312,27,0	1/1:1,7:8:21.06:242,21,0	1/1:2,19:21:54.13:610,54,0	1/1:1,7:8:21.06:242,21,0	1/1:9,13:22:42.09:461,42,0	1/1:2,26:29:78.06:880,78,0	1/1:1,11:14:29.75:306,30,0	1/1:3,23:26:66.15:747,66,0	1/1:1,24:25:66.20:760,66,0	1/1:1,6:7:18.05:208,18,0	1/1:1,19:20:54.16:623,54,0	1/1:0,25:25:75.21:856,75,0	1/1:3,26:29:78.23:900,78,0	1/1:1,9:10:27.08:312,27,0
chr10	94016056	.	TGAGAGAGAGA	T	1810.47	PASS	AB=0.750;AC=27;AF=0.519;AN=52;BaseQRankSum=5.096;DP=554;FS=5.442;HRun=0;HaplotypeScore=122.7552;InbreedingCoeff=0.6491;MQ=64.50;MQ0=65;MQRankSum=-5.453;QD=10.84;ReadPosRankSum=0.363;VQSLOD=2.0880;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:15.51:0,16,520	0/0:3,0:4:6.02:0,6,239	0/0:113,0:33:0.89:0,1,2	./.	0/0:11,0:14:9.03:0,9,333	1/1:14,7:22:9.03:247,9,0	./.	1/1:20,0:19:0.47:1,0,0	0/0:8,0:9:12.04:0,12,431	0/0:8,0:8:6.02:0,6,218	0/0:12,0:13:21.06:0,21,751	1/1:5,4:8:3.01:89,3,0	1/1:9,1:10:6.02:138,6,0	1/1:11,3:14:9.03:266,9,0	0/0:9,0:9:6.02:0,6,188	0/0:6,0:8:8.62:0,9,176	0/0:9,0:16:12.51:0,13,542	0/0:6,0:6:12.04:0,12,593	0/1:6,0:9:0:0,0,0	1/1:8,0:11:6.02:140,6,0	1/1:6,0:8:3:26,3,0	1/1:10,3:13:10.59:270,11,0	1/1:4,6:11:12.04:336,12,0	1/1:7,0:7:3.01:50,3,0	0/0:11,0:10:15.04:0,15,618	1/1:9,0:11:3.01:70,3,0	1/1:14,0:17:12.04:279,12,0	1/1:3,0:3:3.01:70,3,0
chr10	94016193	.	TATATATAC	T	3739.71	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-1.257;DP=304;FS=27.164;HRun=0;HaplotypeScore=101.1452;InbreedingCoeff=0.6346;MQ=66.52;MQ0=2;MQRankSum=-7.525;QD=38.55;ReadPosRankSum=-5.291;VQSLOD=0.5436;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.13:0,42,1759	0/0:8,0:8:15.05:0,15,340	0/1:8,0:3:20.83:21,0,55	0/0:12,0:5:2.11:0,2,63	0/0:19,0:19:42.12:0,42,827	1/1:3,6:9:21.06:550,21,0	1/1:2,1:3:3.01:57,3,0	0/0:29,0:29:32.60:0,33,1568	0/0:4,0:4:6.02:0,6,127	0/1:16,0:16:1.16:1,0,644	0/0:25,0:25:45.05:0,45,942	1/1:4,4:8:23.91:434,24,0	1/1:2,7:9:21.07:612,21,0	1/1:0,9:9:21.07:612,21,0	0/0:4,0:4:6.02:0,6,127	0/0:4,0:4:9.03:0,9,191	0/0:14,0:14:26.12:0,26,147	0/0:5,0:5:14.97:0,15,253	0/0:11,0:11:9.28:0,9,677	0/0:16,0:16:39.13:0,39,844	0/0:6,0:6:8.95:0,9,144	1/1:0,13:13:30.10:874,30,0	1/1:2,5:7:21.06:519,21,0	1/1:1,1:2:3.01:50,3,0	0/0:12,0:12:26.88:0,27,476	0/1:13,0:13:10.31:10,0,618	0/0:16,0:16:12.08:0,12,667	0/0:6,0:6:6.02:0,6,127
chr10	94016197	.	TATAC	T	2473.80	PASS	AB=0.915;AC=26;AF=0.464;AN=56;BaseQRankSum=4.185;DP=304;FS=5.788;HRun=0;HaplotypeScore=86.1342;InbreedingCoeff=0.2636;MQ=65.12;MQ0=2;MQRankSum=-4.735;QD=12.75;ReadPosRankSum=-4.428;VQSLOD=1.3144;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.13:0,42,1081	0/0:7,0:7:14.02:0,14,81	0/0:9,0:3:5.26:0,5,28	0/0:12,0:4:2.60:0,3,10	0/0:19,0:19:32.61:0,33,127	1/1:7,0:7:18.05:214,18,0	1/1:3,0:3:2.80:13,3,0	0/1:28,0:28:31.59:32,0,304	0/0:4,0:4:5.36:0,5,21	0/1:16,1:17:97.65:170,0,98	0/1:24,1:25:18.75:19,0,121	1/1:8,0:8:23.93:239,24,0	1/1:9,0:9:24.06:275,24,0	1/1:9,0:9:21.06:249,21,0	0/0:6,0:6:5.36:0,5,21	0/0:4,0:4:8.04:0,8,32	1/1:0,14:14:27.09:536,27,0	0/1:3,1:4:20.70:48,0,21	0/0:11,0:11:7.03:0,7,137	0/0:16,0:16:11.33:0,11,156	0/1:3,1:4:12.81:50,0,13	1/1:13,0:13:30.09:356,30,0	1/1:7,0:7:20.88:216,21,0	1/1:2,0:2:0.89:2,1,0	0/1:11,2:13:56.74:95,0,57	0/1:14,0:14:81.35:81,0,103	0/1:16,1:17:62.37:62,0,99	0/0:6,0:6:5.36:0,5,21
chr10	94016199	.	TAC	T	5540.35	PASS	AC=48;AF=0.923;AN=52;BaseQRankSum=3.247;DP=301;FS=1.048;HRun=0;HaplotypeScore=68.7877;InbreedingCoeff=0.6240;MQ=65.20;MQ0=2;MQRankSum=0.333;QD=21.15;ReadPosRankSum=1.047;VQSLOD=4.8532;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:42.08:0,42,637	1/1:2,5:7:9.03:114,9,0	0/0:9,0:3:2.96:0,3,19	./.	1/1:0,19:19:39.12:492,39,0	1/1:7,0:7:17.89:130,18,0	1/1:3,0:3:2.92:17,3,0	1/1:8,19:27:57.02:585,57,0	1/1:0,4:4:6.02:76,6,0	1/1:4,12:16:38.80:357,39,0	1/1:2,24:26:42.11:518,42,0	1/1:8,0:8:23.80:170,24,0	1/1:9,0:9:23.88:177,24,0	1/1:9,0:9:20.87:151,21,0	1/1:0,6:6:6.02:76,6,0	1/1:0,4:4:8.71:114,9,0	1/1:14,0:14:26.90:206,27,0	1/1:1,3:4:12.01:137,12,0	1/1:1,10:11:30.01:321,30,0	1/1:2,14:16:30.03:361,30,0	1/1:1,3:4:9:98,9,0	1/1:13,0:13:29.82:216,30,0	1/1:7,0:7:20.83:149,21,0	./.	1/1:2,10:12:24.03:275,24,0	1/1:2,12:14:36.02:373,36,0	1/1:4,12:16:30.05:350,30,0	1/1:0,6:6:6.02:76,6,0
chr10	94016240	.	G	GTATA	1702.40	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-0.147;DP=340;FS=0.000;HRun=0;HaplotypeScore=84.6996;InbreedingCoeff=0.8126;MQ=69.35;MQ0=1;MQRankSum=-3.130;QD=30.95;ReadPosRankSum=3.436;VQSLOD=3.2254;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:42.08:0,42,666	0/0:8,0:8:18.04:0,18,289	0/0:4,0:3:2.83:0,3,27	0/0:12,0:8:7.23:0,7,104	0/0:19,0:19:54.17:0,54,907	1/1:4,7:11:18.06:461,18,0	1/1:3,5:8:6.02:154,6,0	0/0:34,0:34:93.25:0,93,1444	0/0:8,0:8:21.06:0,21,332	0/0:17,0:17:39.12:0,39,663	0/0:26,0:26:66.21:0,66,1136	1/1:2,6:8:12.04:307,12,0	1/1:5,3:8:11.97:249,12,0	1/1:4,1:5:6.02:126,6,0	0/0:6,0:6:9.02:0,9,131	0/0:6,0:6:14.85:0,15,260	0/0:16,0:16:33.08:0,33,526	0/0:5,0:5:15.01:0,15,232	0/0:19,0:19:48.08:0,48,729	0/0:23,0:23:54.13:0,54,839	0/0:10,0:10:18.05:0,18,290	1/1:4,1:5:6.02:127,6,0	1/1:1,6:7:15.05:384,15,0	1/1:1,2:3:3.01:77,3,0	0/0:13,0:13:21.06:0,21,343	0/0:17,0:17:45.14:0,45,763	0/0:12,0:12:3.48:0,3,54	0/0:12,0:12:21.05:0,21,335
chr10	94016418	.	TTTG	T	2917.66	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.497;DP=450;FS=1.048;HRun=0;HaplotypeScore=61.9781;InbreedingCoeff=0.9891;MQ=72.72;MQ0=0;MQRankSum=-0.201;QD=29.77;ReadPosRankSum=1.730;VQSLOD=3.3504;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.17:0,72,1405	0/0:12,0:12:33.10:0,33,656	0/0:18,0:17:25.57:0,26,523	0/0:15,0:12:20.09:0,20,551	0/0:20,0:20:51.17:0,51,1068	1/1:2,23:25:48.16:737,48,0	1/1:3,6:9:15.05:230,15,0	0/0:22,0:22:42.12:0,42,778	0/0:23,0:23:69.21:0,69,1364	0/0:20,0:20:57.19:0,57,1168	0/0:18,0:18:48.13:0,48,923	1/1:1,7:8:21.07:322,21,0	1/1:1,7:8:18.06:276,18,0	1/1:0,11:11:24.08:368,24,0	0/0:13,0:13:33.11:0,33,696	0/0:9,0:9:24.07:0,24,466	0/0:15,0:15:42.14:0,42,867	0/0:7,0:7:15.05:0,15,294	0/0:31,0:31:75.17:0,75,1408	0/0:26,0:26:72.23:0,72,1415	0/0:8,0:8:21.07:0,21,401	1/1:1,11:12:30.02:408,30,0	1/1:0,14:14:30.10:460,30,0	1/1:3,8:11:21.07:322,21,0	0/0:18,0:18:48.14:0,48,937	0/0:16,0:16:48.13:0,48,913	0/0:24,0:24:66.18:0,66,1253	0/0:12,0:12:27.01:0,27,484
chr10	94016839	.	A	AC	24335.75	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.900;DP=604;FS=0.000;HRun=0;HaplotypeScore=54.0773;InbreedingCoeff=0.9683;MQ=85.96;MQ0=0;MQRankSum=-9.904;QD=43.00;ReadPosRankSum=5.632;VQSLOD=4.7658;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:36:96.33:1535,96,0	1/1:0,5:5:15.05:239,15,0	0/0:25,0:25:67.09:0,67,908	0/0:13,0:13:36.11:0,36,483	1/1:1,35:35:99:1580,99,0	1/1:0,27:27:72.25:1151,72,0	1/1:0,20:20:45.15:720,45,0	1/1:1,24:25:72.23:1120,72,0	1/1:0,14:14:36.12:575,36,0	1/1:0,28:28:81.28:1295,81,0	1/1:0,30:30:81.28:1295,81,0	1/1:0,18:18:51.17:815,51,0	1/1:0,16:16:39.13:624,39,0	1/1:0,22:22:57.19:911,57,0	1/1:1,15:16:36.12:576,36,0	1/1:2,18:20:45.13:720,45,0	1/1:0,28:28:81.28:1295,81,0	1/1:0,6:6:12.04:192,12,0	1/1:1,21:22:63.17:952,63,0	1/1:3,40:43:99:1628,102,0	1/1:0,21:21:63.21:1007,63,0	1/1:0,18:18:54.18:863,54,0	1/1:0,32:32:93.32:1487,93,0	1/1:0,16:16:48.16:767,48,0	1/1:1,12:13:33.11:528,33,0	1/1:0,28:28:84.27:1312,84,0	1/1:0,20:20:57.19:911,57,0	1/1:0,6:6:15.05:240,15,0
chr10	94017830	.	A	ACTTT	1848.39	PASS	AB=0.980;AC=24;AF=0.462;AN=52;BaseQRankSum=-4.284;DP=369;FS=1.506;HRun=0;HaplotypeScore=83.2325;InbreedingCoeff=0.0852;MQ=69.37;MQ0=1;MQRankSum=-0.378;QD=7.64;ReadPosRankSum=1.254;VQSLOD=2.3750;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:14:5.95:50,6,0	0/0:4,0:4:9.02:0,9,89	./.	./.	0/0:19,0:19:8.74:0,9,68	0/1:12,4:16:18.78:470,0,19	1/1:11,0:11:3.01:52,3,0	1/1:24,0:24:5.45:24,5,0	0/0:13,0:13:18.02:0,18,170	0/1:14,0:14:34.93:35,0,126	0/0:16,0:16:27.43:0,27,239	1/1:3,0:3:2.80:13,3,0	0/1:14,0:14:27.47:72,0,27	0/0:4,0:4:0.47:0,0,1	1/1:11,0:11:21.07:475,21,0	1/1:11,0:10:12.03:159,12,0	1/1:13,12:26:24.08:523,24,0	0/1:10,0:10:15.92:16,0,18	0/1:14,0:11:17.64:53,0,18	0/1:15,0:15:17.55:18,0,42	0/1:10,0:10:31.90:32,0,47	0/0:9,0:9:5.33:0,5,17	0/1:9,0:9:0.43:0,0,5	0/0:7,0:7:2.20:0,2,11	0/0:17,0:17:5.08:0,5,259	0/1:17,0:17:9.81:10,0,96	0/1:23,0:23:3:3,0,163	0/0:17,0:17:2.42:0,2,47
chr10	94017877	.	TTCTC	T	2389.63	PASS	AB=0.983;AC=25;AF=0.463;AN=54;BaseQRankSum=-7.678;DP=390;FS=2.001;HRun=0;HaplotypeScore=126.1285;InbreedingCoeff=-0.5705;MQ=42.10;MQ0=10;MQRankSum=-0.440;QD=7.42;ReadPosRankSum=0.798;VQSLOD=2.4938;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:2.94:0,3,97	0/1:6,0:6:2.07:2,0,142	0/0:18,0:4:8.47:0,8,68	./.	0/1:16,2:17:67.27:179,0,67	0/1:13,0:13:21.44:21,0,402	0/1:7,0:7:8.05:8,0,98	1/1:16,0:16:37.27:244,37,0	0/1:17,0:17:22.85:23,0,315	0/1:17,0:16:99:114,0,196	0/1:20,0:20:33.01:33,0,281	0/0:6,0:5:8.95:0,9,81	0/1:16,0:15:99:134,0,187	0/1:7,0:7:30.38:30,0,116	0/0:13,0:13:4.65:0,5,131	0/1:10,0:9:39.31:39,0,56	0/1:20,0:18:28.77:29,0,445	0/1:10,0:9:7.22:32,0,7	0/1:20,0:14:68.21:158,0,68	0/1:16,2:18:87.45:297,0,87	0/1:6,0:6:15.94:16,0,76	0/1:7,0:7:5.15:57,0,5	0/1:12,0:12:19.83:20,0,168	0/1:11,0:11:5.78:6,0,68	0/1:22,0:22:32.58:33,0,434	0/1:17,4:21:28.33:465,0,28	1/1:14,6:20:1.22:507,1,0	0/1:8,0:8:50.99:91,0,51
chr10	94017907	.	TTC	T	2970.26	PASS	AB=0.859;AC=23;AF=0.411;AN=56;BaseQRankSum=5.716;DP=415;FS=3.929;HRun=0;HaplotypeScore=116.1298;InbreedingCoeff=-0.6341;MQ=38.52;MQ0=9;MQRankSum=-4.434;QD=8.87;ReadPosRankSum=0.584;VQSLOD=3.2816;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:13:75.08:75,0,257	0/1:2,2:4:38.75:77,0,39	0/0:21,0:6:15.05:0,15,252	0/0:30,0:5:11.38:0,11,135	0/1:10,13:22:99:327,0,157	0/0:14,0:14:23.68:0,24,307	0/1:9,0:9:15.98:16,0,237	0/1:23,0:23:8.04:8,0,832	0/1:5,10:15:99:262,0,154	0/1:9,7:15:99:258,0,230	0/1:7,9:16:89.54:335,0,90	0/0:7,0:6:8.86:0,9,106	0/1:18,1:16:85.55:86,0,110	0/1:6,0:6:11.66:12,0,112	0/1:4,10:14:99:270,0,105	0/1:3,5:7:6.56:114,0,7	0/1:15,1:14:88.21:88,0,327	0/1:9,0:8:29.89:44,0,30	0/1:26,0:23:87.81:88,0,420	0/1:23,1:24:99:264,0,308	0/1:2,0:2:30.84:31,0,39	0/1:5,0:5:0.23:67,0,0	0/0:8,0:8:22.81:0,23,216	0/1:10,1:11:76.09:76,0,115	0/1:9,11:20:99:289,0,265	0/1:20,1:19:99:120,0,410	0/1:22,1:23:99:173,0,279	0/1:11,0:11:47.91:48,0,128
chr10	94017909	.	C	CTT	5308.31	PASS	AB=0.791;AC=27;AF=0.482;AN=56;BaseQRankSum=5.680;DP=421;FS=6.156;HRun=3;HaplotypeScore=110.3528;InbreedingCoeff=-0.7943;MQ=39.08;MQ0=9;MQRankSum=-3.299;QD=14.27;ReadPosRankSum=3.435;VQSLOD=1.8986;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:8,6:13:99:184,0,188	0/1:4,0:4:15.97:16,0,35	0/0:20,0:6:15.05:0,15,227	0/0:29,0:5:11.88:0,12,141	0/1:22,0:21:99:188,0,215	0/1:8,1:15:32.27:32,0,229	0/1:7,2:9:32.89:33,0,209	0/1:23,3:26:99:123,0,768	0/1:16,0:16:69.44:69,0,147	0/1:16,0:15:99:108,0,238	0/1:14,0:15:80.66:187,0,81	0/1:3,4:6:48.94:49,0,75	0/1:10,9:16:52.04:529,0,52	0/1:3,3:6:76.10:127,0,76	0/1:14,0:14:99:99,0,107	0/1:8,0:7:21.99:22,0,35	0/1:13,1:13:99:142,0,257	0/1:6,2:8:50.96:51,0,67	0/1:12,15:24:99:606,0,376	0/1:8,16:24:99:738,0,246	0/1:1,1:2:39.39:51,0,39	1/1:3,3:7:14.91:176,15,0	0/1:3,7:10:99:265,0,112	0/1:3,8:12:68.90:199,0,69	0/1:19,0:19:99:137,0,250	0/1:12,9:19:99:417,0,333	0/1:10,13:23:99:552,0,232	0/1:7,4:11:99:209,0,114
chr10	94018085	.	G	GAA	2053.60	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-10.419;DP=422;FS=4.290;HRun=10;HaplotypeScore=107.2141;InbreedingCoeff=0.9515;MQ=58.49;MQ0=1;MQRankSum=1.411;QD=20.54;ReadPosRankSum=-1.094;VQSLOD=2.7419;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:73.76:0,74,443	0/0:10,0:12:21.59:0,22,128	0/0:17,0:9:26.46:0,26,229	0/0:14,0:8:8.92:0,9,143	0/0:21,0:24:57.55:0,58,348	1/1:3,17:20:33.11:491,33,0	1/1:4,15:20:23.05:283,23,0	0/0:14,0:17:31.24:0,31,200	0/0:18,0:18:44.42:0,44,308	0/0:22,0:21:58.49:0,58,370	0/0:18,0:21:49.76:0,50,297	1/1:0,4:5:11.53:143,12,0	1/1:2,3:5:5.98:65,6,0	1/1:3,3:6:13.34:148,13,0	0/0:11,0:11:20.33:0,20,149	0/0:9,0:9:23.54:0,24,150	0/0:18,0:17:23.34:0,23,152	0/0:10,0:10:23.16:0,23,147	0/0:9,0:9:20.42:0,20,122	0/0:21,0:21:53.74:0,54,357	0/0:6,0:6:11.77:0,12,75	1/1:6,8:14:30.04:400,30,0	1/1:2,9:12:23.57:322,24,0	1/1:4,14:17:27.09:403,27,0	0/0:15,0:15:34.94:0,35,205	0/0:12,0:15:35.05:0,35,199	0/0:15,0:17:43.57:0,44,285	0/0:8,0:8:20.23:0,20,126
chr10	94018476	.	G	GT	3532.23	PASS	AB=0.736;AC=33;AF=0.589;AN=56;BaseQRankSum=3.357;DP=438;FS=18.236;HRun=11;HaplotypeScore=97.8751;InbreedingCoeff=0.4561;MQ=67.60;MQ0=0;MQRankSum=-5.503;QD=10.36;ReadPosRankSum=-1.158;VQSLOD=0.9538;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:4,14:18:16.41:212,0,16	0/1:10,4:14:92.19:92,0,109	0/0:13,0:11:9.72:0,10,94	0/1:11,0:12:10.71:11,0,71	0/1:24,3:28:5.22:5,0,312	1/1:15,0:15:33.68:160,34,0	1/1:14,0:14:30.85:146,31,0	0/1:19,14:33:32.58:405,0,33	0/0:22,0:23:41.18:0,41,301	0/0:18,0:18:29.82:0,30,232	0/0:8,0:9:22.94:0,23,168	1/1:12,0:12:22.60:114,23,0	1/1:14,0:14:25.31:122,25,0	1/1:15,0:15:30.65:142,31,0	0/0:11,0:11:19.74:0,20,145	0/0:5,0:8:18.05:0,18,108	0/1:3,0:14:5.90:32,0,6	0/0:7,0:7:14.80:0,15,107	1/1:11,5:18:36.59:318,37,0	1/1:7,28:36:75.53:677,76,0	1/1:1,5:6:5.56:60,6,0	1/1:17,0:17:25.34:124,25,0	1/1:14,0:14:33.74:162,34,0	1/1:12,0:12:21.86:97,22,0	0/0:7,0:8:19.84:0,20,137	0/1:12,12:26:65.56:377,0,66	1/1:5,13:18:0.81:185,1,0	1/1:0,4:4:9.02:90,9,0
chr10	94018478	.	T	TTTTTG	7047.22	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-7.887;DP=458;FS=1.432;HRun=0;HaplotypeScore=121.2423;InbreedingCoeff=0.7654;MQ=66.30;MQ0=0;MQRankSum=-9.582;QD=40.97;ReadPosRankSum=2.473;VQSLOD=4.5958;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:21.52:22,0,279	0/0:14,0:14:35.08:0,35,475	0/1:13,0:11:53.76:54,0,215	0/0:11,0:11:25.95:0,26,310	0/0:27,0:27:78.07:0,78,1151	1/1:2,15:17:36.10:1026,36,0	1/1:2,13:15:33.08:940,33,0	0/0:35,0:35:75.63:0,76,802	0/0:23,0:23:59.13:0,59,856	0/0:18,0:18:45.11:0,45,749	0/0:10,0:10:30.08:0,30,489	1/1:2,10:13:27.08:750,27,0	1/1:1,13:14:27.09:765,27,0	1/1:1,14:16:33.11:927,33,0	0/0:10,0:10:23.65:0,24,391	0/0:9,0:9:27.04:0,27,387	0/1:15,0:14:2.99:16,0,3	0/0:7,0:7:20.98:0,21,293	0/0:20,0:20:23.78:0,24,238	0/0:38,0:38:26.98:0,27,389	0/0:7,0:7:9.46:0,9,76	1/1:3,15:18:11.46:888,11,0	1/1:2,15:20:39.13:1076,39,0	1/1:0,12:12:23.97:584,24,0	0/0:8,0:8:23.96:0,24,387	0/0:26,0:26:67.86:0,68,662	0/0:18,0:18:29.34:0,29,267	0/0:5,0:5:8.36:0,8,57
chr10	94019337	.	AAT	A	4468.04	PASS	AB=0.811;AC=25;AF=0.446;AN=56;BaseQRankSum=5.380;DP=538;FS=9.906;HRun=0;HaplotypeScore=331.8903;InbreedingCoeff=-0.7837;MQ=80.27;MQ0=0;MQRankSum=-7.753;QD=9.33;ReadPosRankSum=-4.115;VQSLOD=2.9654;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,3:20:99:295,0,175	0/1:7,2:9:70.61:71,0,276	0/0:29,0:29:84.25:0,84,1461	0/0:24,0:24:66.13:0,66,1124	0/1:15,6:21:99:129,0,328	0/1:17,8:24:99:298,0,497	0/1:19,4:23:37.52:38,0,675	0/1:14,14:28:99:554,0,752	0/1:19,7:26:99:313,0,520	0/1:24,7:31:99:227,0,782	0/1:20,2:22:61.74:62,0,576	0/1:15,6:21:99:264,0,488	0/1:14,4:18:99:144,0,415	0/1:16,2:18:99:120,0,440	0/1:14,3:17:99:129,0,362	0/1:7,4:11:99:148,0,232	0/1:7,2:9:3.55:4,0,187	0/1:6,1:7:30.86:31,0,146	0/1:9,4:13:99:156,0,417	0/1:25,4:28:99:142,0,793	0/1:6,2:8:8.73:9,0,199	0/1:10,8:18:99:307,0,355	0/1:10,4:14:99:202,0,356	0/1:13,2:15:94.69:95,0,219	0/1:16,5:21:99:240,0,443	0/1:15,8:23:99:293,0,569	0/1:28,4:32:99:196,0,836	0/0:5,1:6:15.01:0,15,134
chr10	94019339	.	T	TTGGAACTTTATACCCA	83771.78	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.144;DP=586;FS=1.249;HRun=0;HaplotypeScore=368.4240;InbreedingCoeff=0.9036;MQ=78.37;MQ0=0;MQRankSum=-10.704;QD=158.36;ReadPosRankSum=5.858;VQSLOD=4.2083;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,11:22:48.16:3219,48,0	1/1:8,1:9:21:745,21,0	0/0:30,0:30:68.78:0,69,2121	0/0:27,0:27:57.08:0,57,1649	1/1:15,10:25:57.19:3762,57,0	1/1:16,10:25:75.26:4911,75,0	1/1:18,5:24:60.21:3463,60,0	1/1:32,0:32:87.30:4857,87,0	1/1:16,11:27:81.28:5180,81,0	1/1:18,12:31:87.30:5750,87,0	1/1:9,14:24:66.23:4481,66,0	1/1:16,5:22:51.17:3236,51,0	1/1:11,8:21:57.20:3528,57,0	1/1:11,8:19:54.18:3748,54,0	1/1:9,7:17:48.16:3156,48,0	1/1:11,3:14:36.12:2130,36,0	1/1:7,4:11:27.05:1485,27,0	1/1:4,4:8:21.07:1209,21,0	1/1:16,1:22:63.16:2744,63,0	1/1:18,12:31:72.20:4435,72,0	1/1:7,2:9:2.86:509,3,0	1/1:16,1:17:42.14:2828,42,0	1/1:12,3:15:39.13:1915,39,0	1/1:9,6:16:33.04:1813,33,0	1/1:13,7:21:54.18:3833,54,0	1/1:16,7:23:66.18:4159,66,0	1/1:19,15:35:87.30:5493,87,0	1/1:2,5:7:15.05:1182,15,0
chr10	94019360	.	T	TC	13812.97	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=9.286;DP=491;FS=1.982;HRun=4;HaplotypeScore=347.5658;InbreedingCoeff=0.9668;MQ=80.61;MQ0=0;MQRankSum=-10.238;QD=31.54;ReadPosRankSum=4.919;VQSLOD=1.7646;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:66.08:844,66,0	1/1:0,5:5:12.04:161,12,0	0/0:25,0:25:44.43:0,44,603	0/0:28,0:28:74.82:0,75,754	1/1:1,21:22:57.10:723,57,0	1/1:2,21:23:63.14:823,63,0	1/1:3,10:13:29.96:358,30,0	1/1:6,20:26:52.92:824,53,0	1/1:3,16:19:48.16:645,48,0	1/1:2,21:22:60.20:810,60,0	1/1:6,17:23:38.95:456,39,0	1/1:3,12:15:39.07:503,39,0	1/1:3,17:20:54.18:717,54,0	1/1:2,10:12:33.04:410,33,0	1/1:2,12:14:36.12:484,36,0	1/1:2,11:13:33.11:443,33,0	1/1:3,12:15:29.99:379,30,0	1/1:1,7:8:18.06:244,18,0	1/1:6,14:20:45.11:590,45,0	1/1:6,16:21:39.09:504,39,0	1/1:1,10:11:13.17:151,13,0	1/1:2,11:13:36.05:452,36,0	1/1:1,12:13:36.03:459,36,0	1/1:1,14:15:42.42:491,42,0	1/1:2,12:14:33.11:444,33,0	1/1:2,15:17:48.12:627,48,0	1/1:4,23:27:69.23:916,69,0	1/1:1,9:10:27.08:353,27,0
chr10	94019370	.	TCAG	T	13806.13	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=10.113;DP=402;FS=5.580;HRun=0;HaplotypeScore=275.4645;InbreedingCoeff=0.9511;MQ=88.97;MQ0=0;MQRankSum=-11.118;QD=39.56;ReadPosRankSum=7.259;VQSLOD=4.6350;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:57.19:820,57,0	1/1:0,5:5:12.04:173,12,0	0/0:23,0:23:58.57:0,59,1208	0/0:30,0:30:78.74:0,79,1680	1/1:0,19:19:51.17:756,51,0	1/1:1,17:18:54.18:772,54,0	1/1:0,9:9:27.09:392,27,0	1/1:1,12:13:36.12:500,36,0	1/1:0,16:16:48.16:706,48,0	1/1:0,18:18:51.17:713,51,0	1/1:0,14:14:39.13:578,39,0	1/1:0,12:12:36.12:525,36,0	1/1:0,14:14:42.14:613,42,0	1/1:1,11:12:36.09:505,36,0	1/1:0,12:12:36.12:523,36,0	1/1:0,12:12:36.12:520,36,0	1/1:0,12:12:24.08:347,24,0	1/1:0,5:5:12.04:169,12,0	1/1:0,15:15:39.13:537,39,0	1/1:0,14:14:33.08:462,33,0	1/1:1,8:9:12.04:167,12,0	1/1:0,13:13:36.12:526,36,0	1/1:0,11:11:33.11:490,33,0	1/1:0,14:14:38.87:572,39,0	1/1:0,12:12:33.11:475,33,0	1/1:1,18:19:57.19:785,57,0	1/1:0,20:20:57.19:839,57,0	1/1:0,9:9:24.08:341,24,0
chr10	94019374	.	TC	T	6859.07	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=10.176;DP=408;FS=7.448;HRun=2;HaplotypeScore=291.0394;InbreedingCoeff=0.9579;MQ=86.63;MQ0=0;MQRankSum=-9.629;QD=19.16;ReadPosRankSum=6.845;VQSLOD=3.5252;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:57.44:403,57,0	1/1:0,5:5:11.93:88,12,0	0/0:21,1:22:19.76:0,20,666	0/0:28,0:28:56.24:0,56,924	1/1:0,19:19:50.45:345,50,0	1/1:1,17:18:53.59:384,54,0	1/1:0,9:9:26.71:185,27,0	1/1:1,12:13:35.88:277,36,0	1/1:0,16:16:47.55:332,48,0	1/1:3,18:21:51.73:390,52,0	1/1:2,14:16:41.31:288,41,0	1/1:0,12:12:35.74:254,36,0	1/1:0,14:14:41.66:294,42,0	1/1:2,11:13:36.34:244,36,0	1/1:1,12:13:34.02:250,34,0	1/1:0,12:12:35.73:255,36,0	1/1:0,12:12:23.40:154,23,0	1/1:0,5:5:11.97:96,12,0	1/1:0,15:15:38.86:299,39,0	1/1:0,14:14:32.21:230,32,0	1/1:1,8:9:17.87:127,18,0	1/1:0,13:13:34.54:246,35,0	1/1:1,11:12:30.93:224,31,0	1/1:0,14:14:38.30:262,38,0	1/1:0,12:12:32.76:233,33,0	1/1:2,18:20:59.48:429,59,0	1/1:0,20:20:56.14:397,56,0	1/1:0,9:9:23.85:174,24,0
chr10	94019735	.	ATAGACTGACAATGAGGCAGAGGATGAGATAGCTTCATGTAGCCCAGGCTGTCCT	A	19038.67	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.340;DP=557;FS=8.636;HRun=0;HaplotypeScore=577.3782;InbreedingCoeff=0.8122;MQ=80.60;MQ0=2;MQRankSum=-9.402;QD=37.55;ReadPosRankSum=5.563;VQSLOD=0.1996;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:35:87.20:1691,87,0	1/1:13,0:13:27.09:491,27,0	0/0:26,0:26:35.73:0,36,1011	0/0:24,0:22:60.61:0,61,965	1/1:0,17:17:5.95:51,6,0	1/1:8,0:8:15.03:179,15,0	1/1:18,0:18:46.26:756,46,0	1/1:1,17:17:48.05:717,48,0	1/1:39,0:33:90.29:2261,90,0	1/1:0,31:31:59.60:1128,60,0	1/1:0,21:21:3.01:99,3,0	1/1:17,0:16:27.09:497,27,0	1/1:13,0:13:24.08:588,24,0	1/1:20,0:17:30.08:600,30,0	1/1:17,0:11:27.09:565,27,0	1/1:11,0:8:17.98:433,18,0	1/1:25,0:24:60.19:1426,60,0	1/1:13,0:12:32.94:690,33,0	1/1:1,22:22:44.38:904,44,0	1/1:1,26:27:18.06:255,18,0	1/1:45,0:43:87.08:1700,87,0	1/1:16,0:16:21.06:394,21,0	1/1:10,0:9:20.80:282,21,0	1/1:15,0:14:29.95:743,30,0	1/1:11,0:11:27.09:690,27,0	1/1:0,23:22:54.09:1017,54,0	1/1:15,0:13:36.05:715,36,0	1/1:4,0:4:6.02:166,6,0
chr10	94019911	.	A	AC	34.83	PASS	AB=0.819;AC=4;AF=0.087;AN=46;BaseQRankSum=4.230;DP=225;FS=4.908;HRun=0;HaplotypeScore=63.5590;InbreedingCoeff=-0.1826;MQ=57.38;MQ0=15;MQRankSum=-2.613;QD=0.76;ReadPosRankSum=-0.225;VQSLOD=1.2085;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:6:9.03:0,9,125	0/0:4,0:3:5.98:0,6,62	0/0:37,0:8:21.07:0,21,282	0/0:32,0:13:39.09:0,39,479	0/0:4,0:2:3.01:0,3,42	0/0:1,0:1:3.01:0,3,42	./.	./.	0/0:17,0:14:29.98:0,30,371	0/0:16,0:7:18.06:0,18,251	0/0:6,0:4:3.01:0,3,42	0/0:7,0:7:5.97:0,6,56	0/0:1,0:1:3.01:0,3,30	0/0:6,0:5:8.85:0,9,56	0/0:8,0:2:6.02:0,6,84	0/0:3,0:1:3.01:0,3,37	0/1:14,3:17:34:34,0,330	0/1:7,1:7:1.77:2,0,184	0/1:7,1:3:17.91:18,0,36	0/0:8,0:5:6.02:0,6,84	0/1:6,7:11:20.25:76,0,20	./.	./.	0/0:2,0:2:5.93:0,6,59	./.	0/0:6,0:1:3.01:0,3,42	0/0:6,0:5:14.97:0,15,166	0/0:2,0:1:3.01:0,3,42
chr10	94020270	.	T	TC	23663.79	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.384;DP=600;FS=10.809;HRun=1;HaplotypeScore=89.3154;InbreedingCoeff=0.9970;MQ=80.84;MQ0=0;MQRankSum=-10.854;QD=42.95;ReadPosRankSum=6.870;VQSLOD=3.3743;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,40:42:99:1774,111,0	1/1:0,11:9:27.09:431,27,0	0/0:22,0:22:63.07:0,63,839	0/0:27,0:26:72.13:0,72,920	1/1:0,19:18:45.15:718,45,0	1/1:0,20:20:57.19:910,57,0	1/1:1,24:25:66.22:1055,66,0	1/1:2,28:30:84.26:1289,84,0	1/1:1,28:29:81.28:1290,81,0	1/1:0,28:28:84.28:1304,84,0	1/1:0,17:15:39.13:623,39,0	1/1:0,18:18:51.17:814,51,0	1/1:0,18:18:54.18:862,54,0	1/1:0,18:18:54.18:863,54,0	1/1:0,15:15:42.14:671,42,0	1/1:0,13:12:36.12:575,36,0	1/1:0,15:15:42.14:671,42,0	1/1:0,12:12:33.11:527,33,0	1/1:1,22:23:69.24:1103,69,0	1/1:0,23:19:45.15:719,45,0	1/1:0,48:48:99:2158,135,0	1/1:0,18:17:36.12:574,36,0	1/1:0,18:18:48.16:765,48,0	1/1:0,26:26:75.26:1198,75,0	1/1:0,12:12:27.09:431,27,0	1/1:0,25:25:75.26:1196,75,0	1/1:0,16:16:45.15:719,45,0	1/1:1,11:11:22.23:423,22,0
chr10	94020627	.	C	CATATTCAT	564.98	PASS	AC=6;AF=0.60;AN=10;BaseQRankSum=-2.262;DP=212;FS=3.522;HRun=0;HaplotypeScore=22.1978;MQ=53.95;MQ0=5;MQRankSum=-1.377;QD=13.45;ReadPosRankSum=0.566;VQSLOD=1.1898;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:3,0:3:3.90:0,4,54	0/0:11,0:6:2.88:0,3,16	./.	./.	./.	1/1:14,10:9:14.97:330,15,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:6,2:6:3.01:75,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:7,2:7:6.02:239,6,0
chr10	94020906	.	C	CCTT	6436.85	PASS	AC=48;AF=0.923;AN=52;BaseQRankSum=5.779;DP=228;FS=239.644;HRun=0;HaplotypeScore=65.8354;InbreedingCoeff=0.4956;MQ=61.04;MQ0=4;MQRankSum=-5.923;QD=42.35;ReadPosRankSum=4.700;VQSLOD=0.4332;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,3:5:3.01:34,3,0	./.	0/0:29,0:17:39.13:0,39,598	0/0:47,0:32:58.02:0,58,820	1/1:0,1:1:3.01:65,3,0	1/1:0,10:10:24.08:504,24,0	1/1:0,5:5:15.05:286,15,0	1/1:2,8:7:18.05:286,18,0	1/1:3,6:8:15.05:317,15,0	1/1:0,3:3:9.03:197,9,0	1/1:0,1:1:3.01:65,3,0	1/1:0,7:7:21.07:431,21,0	1/1:1,9:10:29.97:593,30,0	1/1:1,2:3:3.01:65,3,0	1/1:0,4:5:15.05:325,15,0	1/1:3,7:10:21.07:451,21,0	1/1:2,4:6:6.02:131,6,0	1/1:1,7:8:15.52:322,16,0	1/1:3,7:9:15.05:294,15,0	1/1:3,2:4:3.01:65,3,0	1/1:3,6:9:15.05:286,15,0	1/1:0,1:1:3.01:65,3,0	./.	1/1:1,5:6:9.03:160,9,0	1/1:0,1:1:3.01:65,3,0	1/1:1,15:16:45.15:954,45,0	1/1:1,4:5:12.04:226,12,0	1/1:1,5:6:12.04:248,12,0
chr10	94021300	.	C	CTT	2673.14	PASS	AB=0.976;AC=18;AF=0.321;AN=56;BaseQRankSum=12.015;DP=472;FS=29.936;HRun=0;HaplotypeScore=191.4474;InbreedingCoeff=-0.3578;MQ=67.18;MQ0=2;MQRankSum=-10.093;QD=10.78;ReadPosRankSum=1.699;VQSLOD=1.6645;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:38,2:40:99:387,0,516	1/1:1,0:1:3.01:59,3,0	0/0:30,0:26:25.67:0,26,818	0/0:39,0:32:69.26:0,69,1104	0/1:8,0:8:81.04:81,0,127	0/0:19,0:19:51.13:0,51,778	0/0:20,0:20:54.18:0,54,880	0/1:18,0:18:99:462,0,355	0/1:22,0:22:45.72:326,0,46	0/1:16,0:16:99:149,0,263	0/1:8,1:9:71.50:110,0,71	0/0:23,0:23:60.20:0,60,947	0/0:16,0:16:45.11:0,45,692	0/0:12,0:12:36.08:0,36,558	0/1:16,0:16:57.72:58,0,430	0/1:12,0:12:86.85:87,0,274	0/1:12,1:13:74.72:75,0,266	0/1:9,0:9:20.11:146,0,20	0/1:14,0:14:99:163,0,241	0/1:10,0:10:33.92:107,0,34	0/1:20,1:25:99:156,0,261	0/0:22,0:22:60.15:0,60,922	0/0:19,0:19:42.14:0,42,685	0/0:21,0:20:39.13:0,39,631	0/0:2,0:2:6.02:0,6,94	0/1:15,0:15:99:288,0,103	0/1:13,0:13:57:57,0,218	0/1:7,0:7:76.91:125,0,77
chr10	94021303	.	T	TCCCTTCCT	12623.05	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=-4.153;DP=469;FS=44.727;HRun=0;HaplotypeScore=204.3356;InbreedingCoeff=0.7506;MQ=65.00;MQ0=2;MQRankSum=-5.794;QD=43.68;ReadPosRankSum=-0.480;VQSLOD=2.3576;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:59.48:2366,59,0	1/1:1,0:1:3.01:80,3,0	0/0:29,0:25:19.73:0,20,655	0/0:39,0:31:30.39:0,30,660	1/1:8,0:8:15.04:333,15,0	0/0:18,0:18:17.16:0,17,660	0/1:20,0:20:14.07:14,0,406	1/1:19,0:19:33.07:726,33,0	1/1:19,3:23:51.14:1778,51,0	1/1:16,0:16:27.06:589,27,0	1/1:9,0:9:12.04:499,12,0	0/0:23,0:23:41.81:0,42,713	0/0:16,0:16:45.11:0,45,793	0/0:12,0:12:21.03:0,21,391	1/1:15,0:15:24.03:520,24,0	1/1:10,0:10:18.06:678,18,0	1/1:15,0:15:24.04:688,24,0	1/1:9,0:9:21.07:756,21,0	1/1:13,0:13:26.76:663,27,0	1/1:11,0:11:12:369,12,0	1/1:24,0:24:14.97:350,15,0	0/1:22,0:22:6.23:6,0,677	0/0:20,0:20:2.15:0,2,445	0/0:21,0:20:27.56:0,28,522	1/1:2,0:2:3.01:56,3,0	1/1:15,0:15:36.11:994,36,0	1/1:11,1:13:21.06:600,21,0	1/1:7,0:7:15.05:560,15,0
chr10	94021316	.	T	TC	1118.37	PASS	AB=0.720;AC=14;AF=0.250;AN=56;BaseQRankSum=7.533;DP=444;FS=11.085;HRun=1;HaplotypeScore=172.0042;InbreedingCoeff=-0.2485;MQ=56.76;MQ0=2;MQRankSum=-4.067;QD=5.92;ReadPosRankSum=5.943;VQSLOD=-0.3552;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,11:38:99:153,0,256	0/0:1,0:1:2.98:0,3,21	0/0:30,0:25:63.59:0,64,739	0/0:37,0:26:49.68:0,50,591	0/1:5,1:6:15.23:15,0,51	0/0:17,0:17:21.87:0,22,240	0/0:21,0:21:41.34:0,41,250	0/0:18,0:18:33.77:0,34,227	0/1:8,13:22:47.67:212,0,48	0/1:9,5:14:76.76:106,0,77	0/1:5,2:7:10.62:38,0,11	0/0:21,0:21:46.76:0,47,298	0/0:18,0:18:50.21:0,50,337	0/0:9,0:9:20.27:0,20,123	0/1:7,5:12:10.45:106,0,10	0/1:4,4:8:13.21:83,0,13	0/1:10,6:16:75.43:112,0,75	0/1:7,3:10:40.34:71,0,40	0/1:10,4:14:49.89:92,0,50	0/1:7,3:10:15.92:16,0,74	0/0:21,3:24:34.15:0,34,213	0/0:20,0:20:50.17:0,50,340	0/0:16,0:16:17.45:0,17,181	0/0:19,0:18:35.12:0,35,228	0/0:4,0:4:2.52:0,3,14	0/1:10,3:15:76.50:76,0,97	0/1:4,8:12:5.54:131,0,6	0/1:1,4:5:4.13:60,0,4
chr10	94021318	.	T	TCCCTTCC	6754.11	PASS	AB=0.815;AC=20;AF=0.357;AN=56;BaseQRankSum=2.872;DP=451;FS=19.212;HRun=0;HaplotypeScore=202.4893;InbreedingCoeff=-0.2744;MQ=58.96;MQ0=2;MQRankSum=-6.122;QD=26.38;ReadPosRankSum=-0.667;VQSLOD=2.9431;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,8:39:65.65:1262,0,66	0/0:2,0:2:3:0,3,27	0/0:32,0:27:59.63:0,60,1147	0/0:35,0:25:42.28:0,42,849	0/1:5,1:6:63.04:160,0,63	0/0:18,0:18:25.84:0,26,645	0/0:22,0:22:11.98:0,12,572	0/1:20,0:20:99:110,0,203	0/1:10,12:22:26.19:1266,0,26	0/1:11,3:14:41.45:332,0,41	0/1:5,2:7:14.78:278,0,15	0/0:20,0:20:14.16:0,14,719	0/0:18,0:18:36.12:0,36,840	0/0:8,0:8:21.07:0,21,362	0/1:8,4:12:7.94:275,0,8	0/1:3,4:7:25.35:384,0,25	0/1:14,4:18:58.41:497,0,58	0/1:9,2:11:43.50:312,0,43	0/1:11,2:13:62.80:298,0,63	0/1:7,3:10:41.64:200,0,42	0/1:24,0:24:65.86:98,0,66	0/0:20,0:20:33.64:0,34,723	0/1:17,0:17:33.03:33,0,366	0/0:19,0:18:9.57:0,10,449	1/1:4,0:4:8.99:77,9,0	0/1:13,2:15:99:353,0,151	1/1:7,5:12:6.46:436,6,0	0/1:1,4:5:9.87:381,0,10
chr10	94022236	.	C	CTA	2808.01	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=6.960;DP=362;FS=10.793;HRun=0;HaplotypeScore=107.4173;InbreedingCoeff=0.9610;MQ=82.58;MQ0=0;MQRankSum=-10.329;QD=55.06;ReadPosRankSum=1.146;VQSLOD=3.2096;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:30.10:0,30,489	0/0:9,0:9:24.05:0,24,364	0/0:11,0:11:33.11:0,33,528	0/0:12,0:12:33.11:0,33,535	0/0:28,0:28:81.28:0,81,1320	1/1:0,6:6:18.06:362,18,0	1/1:0,6:6:18.06:358,18,0	0/0:23,0:23:69.20:0,69,1031	0/0:19,0:19:48.15:0,48,759	0/0:13,0:13:39.13:0,39,636	0/0:17,0:17:51.17:0,51,828	1/1:0,8:8:24.08:483,24,0	1/1:1,8:9:27.09:542,27,0	1/1:2,5:7:21.05:352,21,0	0/0:7,0:7:21.06:0,21,319	0/0:8,0:8:24.08:0,24,392	0/0:12,0:12:33.10:0,33,512	0/0:9,0:9:24.08:0,24,387	0/0:20,0:20:60.20:0,60,966	0/0:23,0:23:60.20:0,60,978	0/0:16,0:16:48.16:0,48,774	1/1:0,8:8:24.08:483,24,0	1/1:0,7:7:21.07:422,21,0	0/0:0,3:3:0:0,0,0	0/0:7,0:7:21.07:0,21,338	0/0:19,0:19:57.19:0,57,930	0/0:21,0:21:51.17:0,51,829	0/0:24,0:24:72.20:0,72,1122
chr10	94022240	.	A	AT	2312.93	PASS	AB=0.500;AC=15;AF=0.268;AN=56;BaseQRankSum=10.215;DP=375;FS=14.394;HRun=0;HaplotypeScore=113.5512;InbreedingCoeff=0.9624;MQ=84.52;MQ0=0;MQRankSum=-11.031;QD=36.71;ReadPosRankSum=0.394;VQSLOD=1.9678;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:33.09:0,33,442	0/0:7,0:7:21.07:0,21,294	0/0:14,0:14:39.08:0,39,505	0/0:12,0:12:36.12:0,36,502	0/0:30,0:30:84.17:0,84,1098	1/1:2,6:8:24.08:378,24,0	1/1:0,6:6:17.99:239,18,0	0/0:21,0:21:63.20:0,63,866	0/0:19,0:19:48.13:0,48,637	0/0:15,0:15:39.12:0,39,530	0/0:19,0:19:57.19:0,57,797	1/1:1,7:8:24.06:356,24,0	1/1:2,8:10:27.09:424,27,0	1/1:2,5:7:21.07:330,21,0	0/0:7,0:7:21.07:0,21,294	0/0:8,0:8:24.08:0,24,336	0/0:12,0:12:36.12:0,36,501	0/0:10,0:10:30.08:0,30,400	0/0:19,0:19:57.19:0,57,792	0/0:21,0:21:63.21:0,63,881	0/0:15,0:15:45.13:0,45,598	1/1:3,8:11:27.01:394,27,0	1/1:3,7:10:26.98:388,27,0	0/1:0,3:3:0.18:0,0,0	0/0:8,0:8:21.07:0,21,294	0/0:19,0:19:57.18:0,57,769	0/0:21,0:21:51.16:0,51,698	0/0:24,0:24:72.24:0,72,1007
chr10	94022296	.	GT	G	6045.78	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=1.652;DP=327;FS=2.978;HRun=8;HaplotypeScore=99.6638;InbreedingCoeff=0.8547;MQ=81.55;MQ0=1;MQRankSum=-4.737;QD=20.70;ReadPosRankSum=5.644;VQSLOD=4.4994;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:15:36.47:319,36,0	1/1:1,6:7:15.01:138,15,0	0/0:21,0:17:39.68:0,40,333	0/0:12,0:12:20.91:0,21,196	1/1:8,13:21:40.24:341,40,0	1/1:1,9:10:25.92:243,26,0	./.	1/1:7,19:26:46.60:468,47,0	1/1:1,12:13:27.02:247,27,0	1/1:2,9:11:18.62:223,19,0	1/1:5,12:17:37.77:325,38,0	1/1:1,4:5:12.90:113,13,0	1/1:2,4:6:12.01:110,12,0	1/1:0,6:6:18.01:162,18,0	1/1:0,7:7:21.02:193,21,0	1/1:0,7:7:21.02:190,21,0	1/1:3,7:10:20.93:179,21,0	1/1:2,9:11:27.01:242,27,0	1/1:0,14:14:42:372,42,0	1/1:7,11:18:33.55:298,34,0	1/1:2,7:9:21.02:192,21,0	1/1:2,4:6:12.87:106,13,0	1/1:2,6:7:18.87:159,19,0	1/1:0,1:1:3:27,3,0	1/1:1,11:12:34.59:307,35,0	1/1:3,13:16:39.46:345,39,0	1/1:1,16:17:33.03:302,33,0	1/1:4,15:19:52.12:444,52,0
chr10	94022471	.	CTT	C	7663.78	PASS	AB=0.600;AC=51;AF=0.911;AN=56;BaseQRankSum=-5.292;DP=346;FS=5.998;HRun=10;HaplotypeScore=91.7158;InbreedingCoeff=0.6694;MQ=71.37;MQ0=2;MQRankSum=-2.207;QD=27.47;ReadPosRankSum=6.226;VQSLOD=4.8245;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,16:20:46.39:532,46,0	1/1:0,11:10:30.08:334,30,0	0/0:36,0:17:22.29:0,22,351	0/0:31,0:16:21.50:0,22,246	1/1:3,16:19:54.14:602,54,0	1/1:2,11:13:33.08:368,33,0	1/1:1,8:9:27.07:301,27,0	1/1:4,9:13:21.82:304,22,0	1/1:1,5:6:15.04:167,15,0	1/1:6,13:18:39.09:434,39,0	1/1:3,12:15:30.07:334,30,0	1/1:2,0:2:3.01:33,3,0	0/1:1,2:3:24.46:58,0,24	1/1:1,8:9:24.06:267,24,0	1/1:0,4:4:12.03:133,12,0	1/1:3,6:9:27.06:292,27,0	1/1:5,18:23:54.01:582,54,0	1/1:3,11:14:29.12:362,29,0	1/1:0,9:9:27.07:301,27,0	1/1:1,10:11:30.08:334,30,0	1/1:2,4:6:12.03:134,12,0	1/1:1,6:6:15.04:167,15,0	1/1:1,5:6:18.01:187,18,0	1/1:0,4:4:12.03:134,12,0	1/1:1,5:5:12.03:134,12,0	1/1:5,14:19:51.13:568,51,0	1/1:3,10:13:30.07:334,30,0	1/1:1,8:9:24.06:267,24,0
chr10	94022493	.	T	TA	10618.19	PASS	AB=0.571;AC=51;AF=0.911;AN=56;BaseQRankSum=-3.822;DP=377;FS=5.439;HRun=0;HaplotypeScore=102.5829;InbreedingCoeff=0.6361;MQ=66.87;MQ0=3;MQRankSum=-0.640;QD=35.63;ReadPosRankSum=3.711;VQSLOD=4.3323;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,15:22:43.06:561,43,0	1/1:2,9:10:30.09:408,30,0	0/0:44,0:24:15.26:0,15,351	0/0:32,0:16:1.74:0,2,161	1/1:2,16:18:54.01:697,54,0	1/1:1,11:12:36.11:494,36,0	1/1:0,9:9:27.09:381,27,0	1/1:2,14:15:20.96:463,21,0	1/1:0,7:7:21.07:291,21,0	1/1:2,15:16:48.07:629,48,0	1/1:0,14:14:36.12:511,36,0	1/1:4,0:4:11.98:113,12,0	0/1:1,3:4:23:110,0,23	1/1:0,10:10:30.10:419,30,0	1/1:0,6:6:17.99:229,18,0	1/1:3,7:10:30.06:372,30,0	1/1:4,17:21:63.10:811,63,0	1/1:4,10:14:39:460,39,0	1/1:4,9:11:33.03:411,33,0	1/1:2,9:11:33.08:432,33,0	1/1:1,6:7:17.97:228,18,0	1/1:1,9:9:27.08:366,27,0	1/1:4,5:9:21.04:262,21,0	1/1:2,4:6:18.06:252,18,0	1/1:0,9:8:24.01:316,24,0	1/1:6,11:16:45.12:593,45,0	1/1:1,11:11:36.09:488,36,0	1/1:3,6:9:27:321,27,0
chr10	94022561	.	C	CA	13010.05	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.010;DP=343;FS=2.878;HRun=0;HaplotypeScore=76.3765;InbreedingCoeff=0.9237;MQ=58.97;MQ0=3;MQRankSum=-1.787;QD=40.40;ReadPosRankSum=4.581;VQSLOD=5.5070;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:26:72.25:1145,72,0	1/1:0,4:4:12.04:191,12,0	0/0:9,0:6:12.04:0,12,167	0/0:11,0:7:21.01:0,21,246	1/1:1,16:17:32.96:526,33,0	1/1:0,4:4:9.03:144,9,0	1/1:0,13:13:33.11:524,33,0	1/1:2,7:9:21.07:336,21,0	1/1:0,20:20:60.20:941,60,0	1/1:0,10:9:24.08:381,24,0	1/1:0,14:13:30.10:478,30,0	1/1:0,10:10:30.10:479,30,0	1/1:0,6:6:18.06:285,18,0	1/1:0,13:13:39:580,39,0	1/1:0,10:10:30.10:479,30,0	1/1:0,11:11:27.09:431,27,0	1/1:0,17:17:42.14:656,42,0	1/1:0,17:17:39.13:617,39,0	1/1:0,9:8:24.07:361,24,0	1/1:0,8:8:21.02:291,21,0	1/1:1,12:13:27.09:431,27,0	1/1:0,13:13:30.10:474,30,0	1/1:0,10:10:24.08:383,24,0	1/1:0,13:13:30.10:478,30,0	1/1:0,11:11:33.11:503,33,0	1/1:0,17:16:48.16:754,48,0	1/1:0,17:17:48.16:760,48,0	1/1:0,9:9:24.08:383,24,0
chr10	94023180	.	T	TG	5147.53	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=3.499;DP=555;FS=25.307;HRun=1;HaplotypeScore=184.2685;InbreedingCoeff=0.8217;MQ=76.19;MQ0=0;MQRankSum=-0.178;QD=9.92;ReadPosRankSum=3.075;VQSLOD=1.0957;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,1:27:40.33:246,40,0	1/1:3,0:3:2.92:13,3,0	0/0:18,0:18:51.11:0,51,677	0/0:18,0:18:51.16:0,51,675	1/1:31,0:31:50.17:335,50,0	1/1:19,1:20:32.58:229,33,0	1/1:24,2:26:15.68:155,16,0	1/1:23,2:24:44.01:264,44,0	1/1:27,0:27:36.81:240,37,0	1/1:25,1:26:54.62:382,55,0	1/1:17,0:17:11.78:206,12,0	1/1:17,0:17:23.26:167,23,0	1/1:22,1:23:40.59:240,41,0	1/1:24,1:25:37.09:252,37,0	1/1:10,0:10:18.05:100,18,0	1/1:12,0:12:15.07:72,15,0	1/1:11,0:11:9.82:40,10,0	1/1:22,0:22:47.50:219,47,0	1/1:18,0:18:43.01:285,43,0	1/1:20,0:20:26.20:237,26,0	1/1:25,0:25:42.53:329,43,0	1/1:22,0:22:15.71:91,16,0	1/1:16,0:16:13.21:131,13,0	1/1:11,1:12:8.22:71,8,0	1/1:18,0:18:37.04:260,37,0	1/1:30,0:30:49.56:333,50,0	1/1:24,0:24:38.93:180,39,0	1/1:11,1:12:15.92:70,16,0
chr10	94023634	.	C	CAGAG	4135.93	PASS	AB=0.922;AC=36;AF=0.667;AN=54;BaseQRankSum=-5.098;DP=531;FS=2.708;HRun=0;HaplotypeScore=196.2514;InbreedingCoeff=0.5819;MQ=57.87;MQ0=7;MQRankSum=-4.956;QD=10.97;ReadPosRankSum=-4.035;VQSLOD=2.7819;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:2.79:25,3,0	1/1:2,5:8:6.02:149,6,0	0/0:29,0:15:17.14:0,17,318	0/0:39,0:18:15.69:0,16,325	1/1:16,8:25:20.98:196,21,0	0/1:17,0:17:0.39:0,0,113	0/0:15,0:15:11.84:0,12,97	1/1:27,0:27:41.11:394,41,0	1/1:2,19:20:15.02:259,15,0	1/1:6,21:29:53.01:903,53,0	1/1:14,12:25:12.83:101,13,0	0/0:6,0:6:5.09:0,5,18	0/0:16,0:16:27:0,27,159	0/0:18,0:17:27.88:0,28,169	1/1:8,8:17:3.90:72,4,0	1/1:0,12:11:12.03:252,12,0	1/1:11,0:9:5.74:31,6,0	1/1:5,1:6:8.92:104,9,0	0/1:11,7:18:7.43:358,0,7	1/1:11,11:23:15.50:229,16,0	./.	0/1:21,0:21:3.39:3,0,99	0/0:24,0:24:20.41:0,20,289	0/1:18,0:18:34.11:34,0,40	1/1:7,7:14:3:25,3,0	1/1:21,4:23:35.90:528,36,0	1/1:17,6:21:20.97:324,21,0	1/1:4,7:11:6.02:149,6,0
chr10	94023642	.	GAC	G	1052.11	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-4.827;DP=526;FS=0.572;HRun=0;HaplotypeScore=181.1165;InbreedingCoeff=0.3073;MQ=51.62;MQ0=9;MQRankSum=-0.658;QD=3.19;ReadPosRankSum=-7.875;VQSLOD=-0.6415;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,2:18:3:25,3,0	0/1:6,0:6:2.23:15,0,2	0/0:32,0:16:18.63:0,19,332	0/0:47,0:22:19.51:0,20,376	1/1:28,0:27:12.54:105,13,0	0/0:20,0:19:3.31:0,3,150	0/0:12,0:12:11.71:0,12,80	1/1:23,1:24:41.26:303,41,0	0/1:21,0:19:5.17:28,0,5	1/1:28,0:28:16.62:200,17,0	1/1:28,0:26:11.99:100,12,0	0/0:5,0:5:6:0,6,54	0/0:19,0:19:29.90:0,30,248	0/0:19,0:18:26.77:0,27,202	1/1:14,1:15:6:57,6,0	0/1:14,0:12:7.40:7,0,20	1/1:8,3:9:5.94:42,6,0	0/1:5,0:4:3.95:36,0,4	0/0:17,0:14:5.87:0,6,54	1/1:24,0:24:2.89:59,3,0	0/1:7,0:6:0:0,0,0	0/1:17,0:17:24.51:25,0,113	0/0:24,0:24:20.87:0,21,310	0/1:16,0:16:33.94:34,0,52	1/1:14,0:13:3:25,3,0	1/1:22,0:20:1.09:100,1,0	0/1:22,0:20:5.59:52,0,6	0/1:9,0:9:9.41:11,0,9
chr10	94023650	.	GAC	G	451.67	PASS	AB=0.931;AC=18;AF=0.333;AN=54;BaseQRankSum=0.342;DP=542;FS=2.961;HRun=0;HaplotypeScore=175.7892;InbreedingCoeff=0.0169;MQ=47.01;MQ0=14;MQRankSum=-0.817;QD=1.60;ReadPosRankSum=-4.701;VQSLOD=1.4438;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,2:17:0:0,0,0	0/1:6,0:6:7.52:15,0,8	0/0:38,0:17:19.56:0,20,386	0/0:61,1:26:24.84:0,25,509	0/1:27,1:27:5.90:6,0,56	0/0:24,0:23:15.46:0,15,191	0/0:12,0:12:11.78:0,12,100	0/1:22,1:23:99:108,0,281	0/1:25,0:23:26.88:27,0,48	0/1:25,1:26:99:105,0,109	1/1:28,1:27:5.99:50,6,0	0/0:5,0:5:6.01:0,6,59	0/0:20,0:20:12.91:0,13,255	0/0:20,0:19:11.21:0,11,235	1/1:17,0:16:3.01:32,3,0	0/1:13,1:12:5.96:6,0,81	1/1:9,0:7:5.94:42,6,0	0/0:3,1:3:6.01:0,6,62	0/1:17,1:15:55.12:55,0,187	0/1:25,1:25:28.39:53,0,28	0/1:5,1:5:0:0,0,0	0/0:17,0:17:18:0,18,192	0/0:23,0:23:42.05:0,42,448	0/0:12,0:12:9:0,9,82	./.	0/1:13,4:15:89.99:90,0,213	0/1:18,3:19:12.92:13,0,55	0/0:7,0:7:4.79:0,5,70
chr10	94023652	.	C	CAG	1928.74	PASS	AB=1.000;AC=26;AF=0.520;AN=50;BaseQRankSum=-0.104;DP=547;FS=12.528;HRun=0;HaplotypeScore=171.8626;InbreedingCoeff=0.5410;MQ=42.65;MQ0=14;MQRankSum=3.964;QD=8.31;ReadPosRankSum=3.552;VQSLOD=2.7601;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:0:0,0,0	0/0:6,0:6:0.94:0,1,2	0/0:37,0:15:20.28:0,20,292	0/0:64,0:27:10.49:0,10,306	0/0:29,0:28:1.27:0,1,3	1/1:15,10:24:17.86:274,18,0	1/1:7,5:12:5.91:102,6,0	0/0:22,0:22:35.51:0,36,377	1/1:24,0:22:7.05:34,7,0	0/1:25,0:25:3.95:4,0,82	./.	1/1:2,4:6:6.02:102,6,0	1/1:8,12:20:29.99:445,30,0	1/1:7,12:18:24.02:333,24,0	1/1:17,0:16:0.89:2,1,0	0/0:14,0:12:2.69:0,3,8	1/1:10,0:8:3.01:46,3,0	1/1:3,0:2:1.45:8,1,0	0/0:21,0:18:0.29:0,0,146	0/0:26,0:25:1.58:0,2,3	./.	1/1:8,8:16:12.04:204,12,0	1/1:12,11:23:8.29:426,8,0	1/1:10,5:15:6.02:102,6,0	./.	0/0:17,0:15:25.32:0,25,181	0/0:20,0:18:4.37:0,4,36	0/0:7,0:7:0.38:0,0,15
chr10	94023664	.	GAGAT	G	89.17	PASS	AB=0.971;AC=8;AF=0.148;AN=54;BaseQRankSum=1.000;DP=493;FS=1.087;HRun=0;HaplotypeScore=153.7864;InbreedingCoeff=0.2188;MQ=38.22;MQ0=18;MQRankSum=-1.991;QD=0.91;ReadPosRankSum=-2.753;VQSLOD=1.9391;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,2:15:0:0,0,0	0/0:5,0:5:0.44:0,0,10	0/0:43,0:12:23.74:0,24,635	0/0:73,0:26:43.06:0,43,872	0/0:26,0:25:5.18:0,5,128	0/1:26,0:24:31.74:32,0,271	0/0:11,0:11:5.66:0,6,136	0/0:14,0:14:36.57:0,37,550	0/0:20,0:18:3.06:0,3,87	0/0:17,0:17:10.58:0,11,210	0/0:25,0:23:0.47:0,0,1	0/0:7,0:7:5.99:0,6,74	0/1:19,0:19:46.81:47,0,301	0/1:16,0:15:73.74:74,0,151	1/1:14,1:14:2.38:14,2,0	0/0:13,0:11:9.01:0,9,86	1/1:5,2:5:3.01:37,3,0	0/0:3,0:2:6.01:0,6,67	0/0:18,0:15:20.55:0,21,386	0/0:19,0:18:6.46:0,6,69	./.	0/0:13,0:13:11.87:0,12,205	0/0:21,0:21:23.79:0,24,388	0/0:12,0:12:6.02:0,6,80	0/0:13,0:12:0:0,0,0	0/0:15,0:13:30.73:0,31,267	0/0:16,0:14:11.59:0,12,97	0/0:6,0:6:5.84:0,6,57
chr10	94023666	.	GAT	G	66.33	PASS	AB=0.886;AC=11;AF=0.204;AN=54;BaseQRankSum=1.063;DP=478;FS=8.403;HRun=0;HaplotypeScore=139.2503;InbreedingCoeff=0.0871;MQ=38.32;MQ0=20;MQRankSum=-1.932;QD=0.44;ReadPosRankSum=-0.307;VQSLOD=1.6488;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:0:0,0,0	0/0:5,0:5:0.70:0,1,28	0/0:42,0:12:27.97:0,28,484	0/0:75,0:25:46.51:0,47,717	0/0:25,0:24:6.90:0,7,108	0/1:12,14:24:25.49:25,0,233	0/0:5,6:11:5.74:0,6,115	0/0:14,0:14:28.05:0,28,663	0/0:20,0:18:2.90:0,3,103	0/0:15,0:15:14.64:0,15,334	0/1:22,0:20:0:0,0,0	0/0:5,2:7:6.02:0,6,87	0/1:13,6:19:37.74:38,0,330	0/1:11,4:14:58.04:58,0,137	1/1:15,0:14:2.48:14,2,0	0/0:13,0:11:9.03:0,9,139	1/1:6,1:5:1.79:5,2,0	0/0:3,0:2:6.02:0,6,110	0/1:17,0:13:19.41:19,0,300	0/0:18,0:17:7.03:0,7,87	./.	0/0:8,5:13:11.87:0,12,186	0/0:15,4:19:12.08:0,12,350	0/0:8,3:11:6.02:0,6,87	0/0:12,0:11:0:0,0,0	0/1:15,0:13:25.93:26,0,376	0/0:14,0:12:11.90:0,12,127	0/0:6,0:6:4.83:0,5,124
chr10	94023676	.	CAG	C	403.01	PASS	AB=0.899;AC=16;AF=0.320;AN=50;BaseQRankSum=1.301;DP=457;FS=10.388;HRun=0;HaplotypeScore=117.8988;InbreedingCoeff=0.0116;MQ=37.27;MQ0=27;MQRankSum=-1.004;QD=2.52;ReadPosRankSum=1.202;VQSLOD=1.7727;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,3:15:2.70:19,3,0	0/1:4,0:4:0:0,0,0	0/0:47,0:12:28.29:0,28,377	0/0:81,0:25:35.55:0,36,481	0/0:19,0:18:3.14:0,3,26	0/1:10,15:23:54.96:55,0,85	0/0:5,8:13:2.70:0,3,23	0/1:14,2:16:64.30:64,0,230	0/0:17,0:15:5.96:0,6,52	0/1:14,1:15:43.31:43,0,92	./.	0/0:4,3:7:3.48:0,3,41	0/1:11,6:17:57.41:57,0,86	1/1:7,4:10:5.93:72,6,0	0/0:13,1:13:1.82:0,2,5	0/0:12,0:10:3.01:0,3,33	1/1:4,3:5:5.97:55,6,0	0/0:3,0:2:6:0,6,59	0/1:15,0:11:40.78:41,0,83	1/1:14,0:13:2.84:29,3,0	./.	0/0:7,8:14:2.99:0,3,24	0/0:9,6:15:5.99:0,6,49	./.	0/0:12,2:13:0:0,0,0	0/1:14,0:12:84.66:85,0,194	0/0:13,0:11:3:0,3,25	0/1:6,0:6:18.18:18,0,64
chr10	94023714	.	GAGAC	G	586.91	PASS	AB=0.855;AC=15;AF=0.441;AN=34;BaseQRankSum=-0.493;DP=357;FS=1.295;HRun=0;HaplotypeScore=50.3971;InbreedingCoeff=0.0313;MQ=21.88;MQ0=84;MQRankSum=-1.705;QD=3.74;ReadPosRankSum=-1.689;VQSLOD=1.3754;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:5,1:4:0:0,0,0	./.	./.	0/0:10,8:14:0.89:0,1,2	0/0:15,0:14:2.88:0,3,20	0/1:10,0:7:0:0,0,0	0/1:25,5:26:99:235,0,715	./.	0/1:8,4:7:13.18:121,0,13	./.	./.	0/0:11,0:9:9.03:0,9,122	0/0:9,0:6:5.80:0,6,39	1/1:5,4:6:2.92:17,3,0	./.	0/1:11,1:7:33.52:44,0,34	0/0:7,0:4:6.02:0,6,90	1/1:8,1:4:9:112,9,0	./.	./.	./.	./.	0/1:16,0:11:0:0,0,0	1/1:12,0:7:2.97:20,3,0	0/1:18,5:17:99:116,0,165	0/1:8,3:7:0:0,0,0	0/1:4,3:5:11.47:26,0,11
chr10	94023716	.	GAC	G	90.92	PASS	AB=0.980;AC=20;AF=0.526;AN=38;BaseQRankSum=1.612;DP=349;FS=6.046;HRun=0;HaplotypeScore=48.2505;InbreedingCoeff=0.1526;MQ=21.64;MQ0=84;MQRankSum=0.615;QD=0.46;ReadPosRankSum=-1.596;VQSLOD=-0.1684;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:11:1.55:4,2,0	0/1:5,0:3:0:0,0,0	./.	./.	1/1:18,0:14:2.04:6,2,0	0/0:14,0:13:2.92:0,3,17	0/1:10,0:7:0:0,0,0	0/1:30,0:26:15.03:15,0,803	./.	0/1:13,0:7:26.98:27,0,39	./.	./.	0/0:11,0:9:9.03:0,9,143	0/0:9,0:6:6:0,6,64	1/1:9,0:6:2.22:7,2,0	./.	0/1:12,0:7:7.81:8,0,63	0/0:7,0:4:5.91:0,6,44	1/1:9,0:4:8.90:60,9,0	1/1:13,0:11:2.74:12,3,0	./.	./.	./.	0/1:13,3:11:0:0,0,0	1/1:10,2:7:2.68:11,3,0	0/1:21,0:15:50.54:51,0,214	0/1:11,0:7:0:0,0,0	0/0:7,0:5:5.05:0,5,48
chr10	94023730	.	GAGAC	G	742.65	PASS	AB=0.922;AC=15;AF=0.341;AN=44;BaseQRankSum=-2.160;DP=350;FS=8.545;HRun=0;HaplotypeScore=62.4016;InbreedingCoeff=0.0545;MQ=22.15;MQ0=95;MQRankSum=0.206;QD=4.47;ReadPosRankSum=4.054;VQSLOD=-0.0068;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,3:12:0:0,0,0	0/0:4,0:2:2.78:0,3,19	./.	./.	0/0:17,2:15:0:0,0,0	0/1:11,0:10:0:0,0,0	0/1:12,0:7:0:0,0,0	0/1:19,6:20:73.90:454,0,74	0/1:8,0:7:0.06:0,0,0	0/1:15,1:8:51.87:52,0,70	./.	0/0:11,0:8:0.94:0,1,3	0/0:12,0:9:5.73:0,6,24	0/0:14,0:9:2.60:0,3,10	0/0:11,2:6:2.74:0,3,12	./.	0/1:14,1:8:46.02:77,0,46	0/0:7,0:3:9.03:0,9,154	1/1:4,0:1:0.47:1,0,0	0/0:17,0:14:0:0,0,0	./.	0/0:19,0:12:0:0,0,0	./.	0/1:15,2:11:0:0,0,0	1/1:11,3:8:2.97:20,3,0	0/1:17,5:16:99:127,0,258	1/1:13,0:10:4.39:14,4,0	0/1:8,1:8:81.22:97,0,81
chr10	94023732	.	GAC	G	206.78	PASS	AB=0.985;AC=14;AF=0.333;AN=42;BaseQRankSum=-0.015;DP=345;FS=14.386;HRun=0;HaplotypeScore=63.1528;InbreedingCoeff=0.0958;MQ=22.08;MQ0=95;MQRankSum=0.268;QD=1.17;ReadPosRankSum=3.555;VQSLOD=-0.0835;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:12:1.41:3,1,0	0/0:3,0:1:2.96:0,3,19	./.	./.	0/0:17,0:13:0.89:0,1,2	./.	0/1:13,0:7:0:0,0,0	0/1:24,0:19:99:104,0,211	0/0:8,0:7:0:0,0,0	0/1:15,0:7:3.27:3,0,129	0/1:18,0:14:0:0,0,0	0/0:8,3:8:0.94:0,1,3	0/0:12,0:9:8.85:0,9,63	0/0:15,0:10:2.53:0,3,16	0/0:12,0:5:2.97:0,3,20	./.	0/1:14,1:8:31.80:39,0,32	0/0:7,0:3:9.03:0,9,137	./.	0/0:13,4:14:0:0,0,0	./.	0/0:18,1:12:0:0,0,0	./.	0/1:16,1:11:0:0,0,0	1/1:14,0:8:2.84:14,3,0	0/1:21,0:16:13.25:13,0,260	1/1:9,4:10:8.83:105,9,0	0/1:9,0:8:26.92:27,0,79
chr10	94023756	.	CAGAG	C	855.15	PASS	AB=0.991;AC=21;AF=0.477;AN=44;BaseQRankSum=-0.221;DP=302;FS=1.395;HRun=0;HaplotypeScore=89.2553;InbreedingCoeff=0.2377;MQ=22.36;MQ0=96;MQRankSum=0.015;QD=5.38;ReadPosRankSum=1.133;VQSLOD=1.7935;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,1:9:0:0,0,0	1/1:7,0:5:6.02:73,6,0	./.	./.	0/1:12,0:9:0:0,0,0	./.	0/0:15,0:7:0.25:0,0,1	1/1:7,0:1:2.96:19,3,0	0/0:9,0:8:2.68:0,3,19	0/1:15,0:6:29.83:175,0,30	0/1:12,0:9:0.33:0,0,0	0/1:13,0:10:15.62:16,0,16	1/1:8,0:5:2.98:21,3,0	0/0:15,0:10:2.37:0,2,8	0/0:17,1:10:1.22:0,1,3	./.	0/1:14,1:9:59.42:59,0,145	0/0:7,0:4:5.98:0,6,99	1/1:3,0:1:3.01:34,3,0	0/1:14,0:12:0.05:0,0,0	./.	0/0:18,0:11:0:0,0,0	./.	0/1:12,0:6:0:0,0,0	0/0:14,2:11:2.67:0,3,14	1/1:14,3:11:20.91:295,21,0	1/1:18,0:16:9.03:114,9,0	1/1:6,0:5:14.72:162,15,0
chr10	94023760	.	GAGAGAC	G	245.10	PASS	AB=0.974;AC=24;AF=0.545;AN=44;BaseQRankSum=-0.593;DP=308;FS=0.000;HRun=0;HaplotypeScore=102.1445;InbreedingCoeff=0.2336;MQ=22.63;MQ0=94;MQRankSum=0.259;QD=1.13;ReadPosRankSum=-0.107;VQSLOD=1.6512;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:8:0:0,0,0	1/1:7,0:5:4.35:17,4,0	./.	./.	0/1:12,0:9:0:0,0,0	./.	0/1:13,1:6:0.33:0,0,0	0/0:9,0:2:0:0,0,0	0/1:11,0:10:0.01:0,0,0	0/1:14,0:7:11.19:11,0,33	0/1:12,0:9:0.36:0,0,0	0/1:12,2:11:2.91:172,0,3	1/1:5,1:5:3.01:37,3,0	1/1:7,7:10:2.34:36,2,0	0/1:17,0:10:0:0,0,0	./.	0/1:15,0:9:0.61:1,0,175	0/0:8,0:5:0.87:0,1,61	1/1:3,0:1:1.25:3,1,0	0/1:14,0:12:0.03:0,0,0	./.	0/0:14,3:11:0:0,0,0	./.	0/1:13,1:8:0.02:0,0,0	0/0:17,0:12:2.19:0,2,7	1/1:19,0:11:5.30:19,5,0	1/1:20,0:18:4.93:16,5,0	1/1:6,0:5:8.15:23,8,0
chr10	94023762	.	GAGAC	G	1238.01	PASS	AB=0.820;AC=25;AF=0.568;AN=44;BaseQRankSum=1.280;DP=317;FS=0.000;HRun=0;HaplotypeScore=101.7692;InbreedingCoeff=0.1462;MQ=22.93;MQ0=94;MQRankSum=0.145;QD=5.48;ReadPosRankSum=0.727;VQSLOD=1.6939;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,2:9:0:0,0,0	1/1:2,5:5:6.02:110,6,0	./.	./.	0/1:6,6:9:0:0,0,0	./.	0/0:15,0:7:0.25:0,0,1	0/1:10,0:3:7.72:13,0,8	1/1:4,7:10:2.42:34,2,0	0/1:10,5:7:2.89:257,0,3	0/1:5,8:10:0.33:0,0,0	0/1:16,0:13:10.84:30,0,11	1/1:8,0:5:2.98:21,3,0	0/0:15,0:10:1.25:0,1,3	0/1:10,8:11:0:0,0,0	./.	0/1:15,0:9:44.21:44,0,145	0/1:8,0:5:2.67:3,0,76	1/1:2,1:1:3.01:54,3,0	0/1:4,10:12:0.05:0,0,0	./.	0/0:17,0:11:0:0,0,0	./.	0/1:13,0:8:0.01:0,0,0	0/1:10,7:12:0.16:0,0,0	1/1:14,5:12:26.99:356,27,0	1/1:7,13:18:11.96:187,12,0	1/1:2,4:5:12.04:226,12,0
chr10	94023778	.	GAGAC	G	152.52	PASS	AB=0.984;AC=26;AF=0.520;AN=50;BaseQRankSum=0.499;DP=396;FS=32.864;HRun=0;HaplotypeScore=122.0689;InbreedingCoeff=0.0822;MQ=27.71;MQ0=95;MQRankSum=-0.421;QD=0.56;ReadPosRankSum=-0.047;VQSLOD=0.4692;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,1:12:0.47:0,0,1	0/0:8,0:6:0.82:0,1,3	0/0:10,0:1:2.97:0,3,20	0/0:12,0:1:2.98:0,3,21	1/1:17,0:14:1.25:4,1,0	./.	1/1:15,0:9:2.11:6,2,0	0/1:16,2:13:62.68:73,0,63	1/1:16,0:15:2.90:8,3,0	0/1:14,0:7:21.09:28,0,21	0/1:14,1:13:0.33:0,0,0	0/1:15,0:13:1.83:2,0,11	1/1:10,0:7:3.06:8,3,0	1/1:14,0:9:1.39:5,1,0	1/1:20,0:13:2.37:8,2,0	./.	0/1:16,0:11:48.40:48,0,137	0/1:9,0:7:24.61:25,0,92	0/1:7,0:4:9.57:29,0,10	1/1:20,0:18:0.67:2,1,0	./.	0/0:19,0:13:2.97:0,3,20	0/1:11,0:8:0.01:0,0,0	0/1:14,0:8:0:0,0,0	0/1:16,0:11:0:0,0,0	0/0:26,0:20:11.95:0,12,42	1/1:21,0:19:2.98:21,3,0	0/0:5,0:4:3.80:0,4,8
chr10	94023788	.	CAGAG	C	3812.36	PASS	AB=0.671;AC=36;AF=0.720;AN=50;BaseQRankSum=0.794;DP=433;FS=4.083;HRun=0;HaplotypeScore=122.8736;InbreedingCoeff=0.2596;MQ=40.69;MQ0=83;MQRankSum=-1.753;QD=11.08;ReadPosRankSum=3.341;VQSLOD=2.6501;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,11:15:0.94:0,1,2	1/1:2,10:10:8.97:129,9,0	0/0:14,0:3:9.03:0,9,151	0/0:22,0:8:10.31:0,10,226	1/1:4,16:17:3.01:55,3,0	./.	1/1:9,6:10:8.65:164,9,0	1/1:8,17:22:20.71:659,21,0	1/1:1,16:16:8.97:165,9,0	0/1:5,7:7:3.63:309,0,4	0/1:2,13:14:0.33:0,0,0	0/1:6,10:13:2.91:193,0,3	1/1:3,7:7:6.02:109,6,0	1/1:5,8:9:2.58:55,3,0	1/1:4,13:13:3.01:54,3,0	./.	0/1:15,0:9:99:127,0,111	0/1:5,4:7:35.98:59,0,36	1/1:5,9:11:5.54:279,6,0	1/1:4,16:18:2.80:55,3,0	./.	1/1:11,7:14:5.83:80,6,0	0/1:3,9:9:0.01:0,0,0	0/1:8,5:8:0:0,0,0	0/1:6,12:13:0:0,0,0	1/1:6,20:21:51.13:888,51,0	1/1:3,19:21:14.72:211,15,0	1/1:1,4:4:12.04:220,12,0
chr10	94023792	.	G	GAC	2012.77	PASS	AB=0.925;AC=38;AF=0.760;AN=50;BaseQRankSum=0.300;DP=433;FS=6.621;HRun=0;HaplotypeScore=127.3639;InbreedingCoeff=0.2906;MQ=43.26;MQ0=72;MQRankSum=-0.441;QD=5.95;ReadPosRankSum=-1.096;VQSLOD=2.4042;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:15:0.47:2,0,0	1/1:12,0:10:3.47:66,3,0	0/0:19,0:6:15.04:0,15,193	0/0:27,0:10:7.56:0,8,156	1/1:20,0:17:2.66:21,3,0	./.	1/1:14,1:10:8.71:81,9,0	1/1:24,0:22:13.85:530,14,0	1/1:17,0:16:8.54:76,9,0	1/1:12,0:8:5.83:106,6,0	0/1:16,0:15:0.20:0,0,0	1/1:16,0:13:13.61:102,14,0	1/1:9,0:7:6.02:88,6,0	1/1:11,0:9:2.68:13,3,0	1/1:16,0:13:2.98:36,3,0	./.	0/1:10,5:9:74.39:155,0,74	0/1:6,2:7:36.56:90,0,37	1/1:16,0:13:12.81:262,13,0	1/1:20,0:18:2.91:19,3,0	./.	1/1:16,1:14:5.67:36,6,0	0/1:13,0:10:0:0,0,0	0/1:11,0:6:0:0,0,0	0/0:16,0:13:0:0,0,0	1/1:25,0:21:28.85:309,29,0	1/1:22,0:21:14.53:132,15,0	0/1:5,0:4:3.01:12,0,3
chr10	94024831	.	A	AGTT	6102.93	PASS	AB=0.743;AC=47;AF=0.839;AN=56;BaseQRankSum=8.654;DP=245;FS=10.285;HRun=0;HaplotypeScore=72.6665;InbreedingCoeff=0.2388;MQ=93.71;MQ0=0;MQRankSum=-6.501;QD=29.20;ReadPosRankSum=5.299;VQSLOD=4.0087;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:7:1.43:135,1,0	1/1:1,1:2:0.56:53,1,0	0/0:19,0:19:39.15:0,39,747	0/0:17,0:17:42.11:0,42,662	1/1:3,3:6:5.72:151,6,0	1/1:3,8:12:19.84:442,20,0	1/1:1,5:6:15.05:298,15,0	1/1:10,2:12:4.68:162,5,0	0/1:5,4:9:2.84:216,0,3	0/1:12,7:19:8.01:386,0,8	0/1:1,0:2:5.81:25,0,6	1/1:1,3:4:6.59:172,7,0	1/1:3,10:13:12.10:551,12,0	1/1:1,6:7:13.29:289,13,0	0/1:6,1:7:2.15:90,0,2	1/1:1,4:5:10.49:232,10,0	1/1:3,7:11:22.41:405,22,0	1/1:1,1:2:5.95:78,6,0	1/1:9,6:15:14.30:352,14,0	1/1:8,1:11:14.94:175,15,0	1/1:0,0:2:3.01:32,3,0	1/1:2,11:13:28.91:612,29,0	1/1:2,7:9:15.42:345,15,0	1/1:2,1:3:4.24:28,4,0	0/1:4,1:6:4.85:89,0,5	1/1:3,5:9:15.60:250,16,0	1/1:5,4:11:16.44:310,16,0	1/1:2,4:6:9.95:226,10,0
chr10	94024839	.	TAAA	T	3835.67	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=1.511;DP=228;FS=33.266;HRun=4;HaplotypeScore=103.8275;InbreedingCoeff=0.8928;MQ=90.08;MQ0=0;MQRankSum=-5.139;QD=33.94;ReadPosRankSum=0.604;VQSLOD=0.4530;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:13.66:0,14,93	1/1:1,3:4:8.96:122,9,0	0/0:18,0:18:51.12:0,51,982	0/0:20,0:20:48.64:0,49,1038	1/1:3,7:10:29.91:407,30,0	0/0:14,0:14:36.05:0,36,412	0/0:6,0:6:18.04:0,18,180	1/1:2,4:6:17.99:249,18,0	1/1:4,3:7:20.78:227,21,0	1/1:8,3:11:32.63:321,33,0	1/1:1,5:6:17.93:259,18,0	0/0:3,0:3:9.02:0,9,90	0/0:11,0:11:33.06:0,33,348	0/0:6,0:6:15.02:0,15,161	1/1:2,1:3:8.88:84,9,0	1/1:4,0:4:11.81:78,12,0	0/0:9,0:9:23.96:0,24,216	1/1:2,0:2:2.98:22,3,0	1/1:7,7:14:39.04:530,39,0	1/1:4,5:9:22.95:297,23,0	1/1:1,2:3:5.95:70,6,0	0/0:13,0:13:39.09:0,39,437	0/0:8,0:8:21.03:0,21,213	0/0:2,0:2:2.68:0,3,50	1/1:3,2:5:14.68:149,15,0	1/1:5,7:12:35.83:453,36,0	1/1:6,4:10:29.76:329,30,0	1/1:4,3:7:20.93:240,21,0
chr10	94024868	.	C	CTCTG	3382.21	PASS	AB=0.881;AC=30;AF=0.625;AN=48;BaseQRankSum=3.538;DP=297;FS=34.127;HRun=0;HaplotypeScore=143.5436;InbreedingCoeff=0.3550;MQ=67.93;MQ0=0;MQRankSum=-6.844;QD=21.54;ReadPosRankSum=2.283;VQSLOD=1.4220;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,2:7:2.99:24,3,0	./.	0/0:34,0:26:47.88:0,48,687	0/0:46,0:36:60.85:0,61,869	1/1:5,6:11:3.01:68,3,0	0/0:14,0:13:4.71:0,5,15	0/0:9,0:9:2.94:0,3,82	1/1:12,4:16:37.54:719,38,0	1/1:4,4:8:6.02:86,6,0	1/1:7,3:10:21.06:402,21,0	1/1:5,5:10:3.01:74,3,0	1/1:2,0:2:3.83:20,4,0	0/1:9,0:9:35.29:35,0,69	0/0:4,0:4:2.74:0,3,12	0/0:3,2:5:0:0,0,0	./.	1/1:5,2:7:9.47:171,9,0	0/1:1,1:2:7.21:69,0,7	0/1:15,3:16:27.82:259,0,28	1/1:5,5:10:3.01:76,3,0	./.	0/0:11,0:11:0:0,0,0	0/1:7,0:7:0:0,0,0	./.	1/1:3,4:7:3.01:74,3,0	1/1:8,5:14:14.75:572,15,0	1/1:7,4:11:15.88:339,16,0	1/1:3,5:8:18.06:395,18,0
chr10	94024880	.	GTC	G	408.93	PASS	AB=0.939;AC=16;AF=0.364;AN=44;BaseQRankSum=1.645;DP=308;FS=8.462;HRun=0;HaplotypeScore=134.4386;InbreedingCoeff=-0.1405;MQ=56.13;MQ0=2;MQRankSum=-5.019;QD=2.98;ReadPosRankSum=-2.319;VQSLOD=1.7851;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:39,0:25:65.55:0,66,1020	0/0:53,0:35:81:0,81,1316	1/1:11,1:12:1.88:6,2,0	0/0:12,0:11:11.68:0,12,115	0/0:8,0:8:14.78:0,15,161	0/1:15,3:17:99:152,0,257	0/1:6,1:7:13.88:28,0,14	0/1:10,1:11:66.58:68,0,67	1/1:12,2:15:0.42:1,0,0	0/1:3,0:3:8.52:9,0,46	0/0:6,0:6:7.83:0,8,86	0/0:3,0:3:3:0,3,27	0/0:3,1:4:2.22:0,2,7	0/0:2,0:2:0.89:0,1,2	0/1:7,0:7:2.78:10,0,3	0/1:2,0:2:14.03:14,0,20	0/1:14,2:14:88.78:105,0,89	./.	./.	1/1:11,0:11:3.11:8,3,0	./.	./.	0/0:6,1:7:0:0,0,0	0/1:12,1:13:79.49:79,0,103	0/1:12,1:13:16.67:17,0,37	0/1:9,0:9:21.06:35,0,21
chr10	94024885	.	T	TCA	900.11	PASS	AB=0.954;AC=25;AF=0.521;AN=48;BaseQRankSum=5.627;DP=306;FS=73.241;HRun=0;HaplotypeScore=126.2172;InbreedingCoeff=0.0612;MQ=58.06;MQ0=4;MQRankSum=-5.845;QD=5.84;ReadPosRankSum=3.421;VQSLOD=0.5020;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:42,0:25:39.42:0,39,889	0/0:55,0:33:81.45:0,81,1202	1/1:11,1:12:2.96:19,3,0	0/0:12,0:11:4.92:0,5,14	0/1:8,0:8:6.32:6,0,57	0/1:18,0:17:76.30:76,0,198	0/1:6,0:6:5.96:6,0,12	0/1:10,1:11:27.10:98,0,27	1/1:12,2:15:2.52:21,3,0	1/1:3,0:3:6.36:33,6,0	0/1:5,0:6:19.79:20,0,84	0/0:3,0:3:2.80:0,3,13	0/0:4,0:4:0.47:0,0,1	1/1:1,0:1:3.01:36,3,0	1/1:4,0:4:9.01:90,9,0	0/1:2,0:2:1.39:38,0,1	0/1:13,2:13:64.42:183,0,64	0/0:9,0:9:0:0,0,0	./.	0/1:10,0:10:0:0,0,0	0/0:3,0:3:0:0,0,0	./.	1/1:8,0:8:2.93:20,3,0	0/1:12,0:13:11.58:151,0,12	1/1:12,0:13:11.86:131,12,0	1/1:8,1:9:1.04:104,1,0
chr10	94024886	.	G	GTCTCTCTCTCAT	11162.14	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=5.901;DP=314;FS=74.330;HRun=0;HaplotypeScore=159.1652;InbreedingCoeff=0.4655;MQ=56.96;MQ0=4;MQRankSum=-6.494;QD=54.72;ReadPosRankSum=1.645;VQSLOD=1.7772;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:5.04:37,5,0	1/1:5,0:5:12.03:126,12,0	0/0:46,0:24:8.20:0,8,932	0/0:59,0:33:58.61:0,59,1672	1/1:13,0:13:9.02:91,9,0	1/1:10,2:11:15.52:845,16,0	1/1:8,0:8:14.86:606,15,0	1/1:18,0:17:28.49:1140,28,0	1/1:6,0:6:15.04:261,15,0	1/1:12,0:12:18.04:703,18,0	1/1:15,0:16:5.10:194,5,0	1/1:2,1:3:8.70:361,9,0	1/1:6,0:6:6.02:192,6,0	1/1:2,1:3:6.02:328,6,0	1/1:4,0:4:2.91:31,3,0	1/1:1,0:1:3.01:42,3,0	1/1:2,2:4:9.03:439,9,0	1/1:2,0:2:6.02:286,6,0	1/1:14,0:12:24.08:889,24,0	1/1:9,0:9:18.01:336,18,0	1/1:8,0:7:3.01:173,3,0	1/1:9,0:9:8.71:230,9,0	1/1:3,0:3:3.01:36,3,0	./.	1/1:8,0:8:12.04:461,12,0	1/1:14,0:14:30.10:1375,30,0	1/1:12,1:13:33.80:1022,34,0	1/1:9,0:9:24.08:959,24,0
chr10	94024896	.	C	CATT	1202.74	PASS	AB=0.978;AC=20;AF=0.370;AN=54;BaseQRankSum=7.142;DP=234;FS=13.710;HRun=0;HaplotypeScore=83.8494;InbreedingCoeff=0.0282;MQ=54.06;MQ0=16;MQRankSum=-4.193;QD=12.66;ReadPosRankSum=2.691;VQSLOD=2.0590;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:1:3.01:0,3,54	0/0:1,0:1:3.01:0,3,42	0/0:43,0:16:42.14:0,42,697	0/0:50,0:23:59.99:0,60,1001	1/1:9,1:10:2.68:29,3,0	0/1:11,1:11:99:215,0,143	0/1:4,0:4:2.51:98,0,3	0/0:10,0:6:18.06:0,18,322	1/1:0,1:1:3.01:70,3,0	0/1:7,0:7:41.93:42,0,131	1/1:8,2:12:2.37:57,2,0	1/1:3,0:3:0.72:93,1,0	0/0:1,1:2:2.37:0,2,8	0/1:2,0:2:46.79:56,0,47	0/0:2,0:1:0.89:0,1,2	0/0:1,0:1:2.98:0,3,22	0/1:5,0:5:57.90:86,0,58	0/0:3,0:2:3.01:0,3,41	0/1:8,0:7:35.18:35,0,119	0/0:5,0:5:6.02:0,6,89	0/0:7,0:5:3.01:0,3,54	0/0:5,0:5:2.99:0,3,56	0/0:4,0:3:2.88:0,3,54	./.	1/1:5,0:5:2.99:62,3,0	0/1:8,0:8:21.34:21,0,138	0/1:8,1:9:98.25:185,0,98	1/1:5,2:7:13.48:300,13,0
chr10	94024898	.	CATGTGT	C	1129.86	PASS	AB=0.917;AC=32;AF=0.571;AN=56;BaseQRankSum=3.875;DP=237;FS=11.629;HRun=0;HaplotypeScore=90.6532;InbreedingCoeff=0.4723;MQ=54.01;MQ0=16;MQRankSum=-4.409;QD=11.41;ReadPosRankSum=2.900;VQSLOD=1.5035;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:2:2.80:13,3,0	1/1:0,2:2:3.48:75,3,0	0/0:42,0:16:32.16:0,32,321	0/0:48,0:21:42.85:0,43,415	0/0:2,8:10:2.03:0,2,7	0/0:13,0:11:14.59:0,15,270	1/1:4,0:4:5.81:33,6,0	1/1:10,0:6:17.54:104,18,0	1/1:2,0:2:6.02:102,6,0	1/1:4,1:7:2.86:203,3,0	1/1:9,3:12:2.50:27,3,0	0/1:3,0:3:17.45:17,0,63	0/0:3,0:3:3.01:0,3,55	0/0:2,0:2:3.01:0,3,56	0/0:1,0:1:2.04:0,2,6	1/1:0,1:1:3.01:73,3,0	0/1:4,0:5:14.67:15,0,46	0/0:3,0:2:3.01:0,3,49	1/1:7,0:7:14.82:100,15,0	1/1:3,1:5:8.81:64,9,0	1/1:7,0:5:2.80:13,3,0	0/0:5,0:5:3.60:0,4,83	0/0:6,0:5:9.03:0,9,185	0/0:4,0:3:6.02:0,6,98	1/1:1,3:5:5.70:74,6,0	1/1:6,0:8:20.51:196,21,0	1/1:4,1:9:11.10:98,11,0	1/1:7,0:7:8.77:98,9,0
chr10	94024904	.	T	TCCC	921.61	PASS	AB=0.985;AC=21;AF=0.375;AN=56;BaseQRankSum=6.143;DP=256;FS=14.045;HRun=0;HaplotypeScore=88.6202;InbreedingCoeff=0.0796;MQ=52.66;MQ0=21;MQRankSum=-5.797;QD=8.16;ReadPosRankSum=-0.267;VQSLOD=1.6077;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:2:3.01:0,3,55	0/1:2,0:2:0.20:0,0,0	0/0:40,0:11:27.09:0,27,487	0/0:45,0:18:36.12:0,36,617	0/1:9,1:10:0:0,0,0	0/1:12,1:11:83.63:84,0,120	0/1:5,0:5:46.64:92,0,47	0/0:12,0:7:18.06:0,18,332	1/1:0,1:3:6.02:106,6,0	0/1:7,0:7:23.29:23,0,118	1/1:12,2:13:5.36:52,5,0	1/1:3,0:3:8.62:107,9,0	0/0:4,1:5:6:0,6,67	0/1:3,0:3:12.41:12,0,16	0/0:2,0:1:0.89:0,1,2	0/0:1,0:1:1.25:0,1,3	0/1:6,0:6:69.88:83,0,70	0/0:3,0:2:3.01:0,3,54	0/1:9,0:9:34.48:34,0,100	0/1:6,0:5:22.65:23,0,56	0/0:8,0:6:2.86:0,3,55	0/0:8,0:7:8.97:0,9,92	0/0:9,0:8:12.04:0,12,187	0/0:5,0:4:6.02:0,6,83	1/1:5,0:5:9:103,9,0	0/1:10,0:9:25.35:25,0,174	0/1:10,0:10:92.51:93,0,111	1/1:5,2:7:15.03:242,15,0
chr10	94024910	.	T	TCCC	316.16	PASS	AB=0.852;AC=12;AF=0.214;AN=56;BaseQRankSum=6.917;DP=265;FS=0.000;HRun=0;HaplotypeScore=92.1804;InbreedingCoeff=-0.2913;MQ=47.42;MQ0=22;MQRankSum=-3.337;QD=3.16;ReadPosRankSum=-2.379;VQSLOD=1.5491;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:4:3.01:0,3,55	0/0:3,0:3:3.01:0,3,33	0/0:34,0:9:18.06:0,18,322	0/0:39,0:11:27.01:0,27,439	0/0:13,1:14:9.03:0,9,143	0/1:10,4:12:42.38:42,0,242	0/1:2,3:5:46.81:70,0,47	0/0:12,0:7:21.07:0,21,387	0/0:3,0:3:6.02:0,6,68	0/1:9,1:10:9.32:9,0,264	0/1:12,2:13:21.82:22,0,47	0/1:2,1:3:39.16:75,0,39	0/0:5,0:5:6.02:0,6,111	0/1:3,0:3:0.52:1,0,51	0/0:3,0:1:0.89:0,1,2	0/0:1,0:1:3.01:0,3,32	0/1:7,0:7:76.66:77,0,122	0/0:4,0:3:5.98:0,6,76	0/1:8,1:8:15.96:16,0,170	0/0:6,1:6:12.04:0,12,170	0/0:7,1:6:2.92:0,3,20	0/0:10,0:9:12.01:0,12,192	0/0:11,0:10:21.05:0,21,358	0/0:4,1:4:6.02:0,6,111	0/1:5,1:6:14.68:15,0,107	0/1:10,1:10:2.41:2,0,308	0/1:10,1:11:44.55:45,0,268	0/1:4,3:7:44.76:77,0,45
chr10	94025006	.	CTG	C	1011.51	PASS	AB=1.000;AC=36;AF=0.750;AN=48;BaseQRankSum=-4.460;DP=340;FS=6.147;HRun=0;HaplotypeScore=68.9412;InbreedingCoeff=-0.0378;MQ=55.02;MQ0=20;MQRankSum=1.656;QD=3.27;ReadPosRankSum=-3.371;VQSLOD=0.2135;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:2.94:18,3,0	./.	0/1:83,0:23:32.36:61,0,32	0/1:104,0:39:63.84:64,0,162	0/0:8,0:8:0:0,0,2	1/1:3,0:3:2.94:18,3,0	1/1:8,0:8:17.89:135,18,0	1/1:4,0:2:3:25,3,0	1/1:8,0:8:2.44:17,2,0	0/1:10,0:10:37.91:142,0,38	0/0:14,0:14:1.97:0,2,9	1/1:2,0:2:2.96:19,3,0	1/1:2,0:2:2.96:19,3,0	./.	./.	1/1:1,0:1:2.94:18,3,0	1/1:5,0:5:5.92:39,6,0	1/1:2,0:2:2.98:21,3,0	1/1:1,6:6:17.90:139,18,0	1/1:17,0:17:3.49:134,3,0	1/1:4,0:4:8.92:63,9,0	0/1:13,0:12:1.37:18,0,1	1/1:9,0:9:3.66:45,4,0	1/1:4,0:3:3.84:21,4,0	0/1:6,0:5:5.30:28,0,5	0/0:5,0:5:5.69:0,6,30	./.	0/1:10,0:9:35.99:91,0,36
chr10	94025505	.	CTGTGTGTGTG	C	1499.69	PASS	AB=0.852;AC=27;AF=0.587;AN=46;BaseQRankSum=5.390;DP=529;FS=1.758;HRun=0;HaplotypeScore=141.3813;InbreedingCoeff=0.4173;MQ=57.86;MQ0=47;MQRankSum=-4.130;QD=7.50;ReadPosRankSum=0.170;VQSLOD=2.6956;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:33:15.05:349,15,0	1/1:2,2:4:3.01:89,3,0	./.	0/0:104,0:20:3.01:0,3,42	0/0:7,0:8:0.47:0,0,1	0/1:10,0:14:18.01:18,0,113	0/0:14,0:17:12.08:0,12,133	./.	1/1:12,5:17:6.02:155,6,0	./.	./.	0/0:6,0:6:9.02:0,9,124	0/0:11,0:12:13.44:0,13,142	0/0:7,0:9:9:0,9,95	1/1:5,3:9:6.01:119,6,0	1/1:8,2:10:2.85:89,3,0	1/1:8,0:11:8.92:156,9,0	0/1:5,0:7:13.94:24,0,14	1/1:13,0:14:3.01:70,3,0	1/1:14,0:17:3.01:70,3,0	0/1:21,0:20:0:0,0,0	./.	0/0:11,0:11:2.99:0,3,24	0/0:9,0:16:9.49:0,9,124	1/1:7,3:11:2.95:89,3,0	1/1:12,0:16:9.03:209,9,0	1/1:5,0:7:6.02:140,6,0	1/1:6,0:6:3.01:70,3,0
chr10	94026115	.	TC	T	3706.83	PASS	AB=0.958;AC=52;AF=0.929;AN=56;BaseQRankSum=2.935;DP=219;FS=0.000;HRun=1;HaplotypeScore=77.7022;InbreedingCoeff=-0.0884;MQ=68.15;MQ0=0;MQRankSum=-4.579;QD=16.93;ReadPosRankSum=5.061;VQSLOD=3.8823;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:7.79:29,8,0	0/1:3,0:3:2.79:35,0,3	0/1:18,0:12:18.38:37,0,18	0/1:4,1:4:7.12:43,0,7	1/1:14,0:14:33.08:226,33,0	1/1:0,6:6:18.06:235,18,0	1/1:0,6:6:15.05:189,15,0	1/1:12,0:10:20.98:150,21,0	0/1:3,0:3:1.04:16,0,1	1/1:10,0:10:16.95:152,17,0	1/1:12,0:12:13.33:155,13,0	1/1:0,1:1:3.01:38,3,0	1/1:0,5:5:15.05:188,15,0	1/1:0,2:2:6.02:75,6,0	1/1:9,0:9:22.22:155,22,0	1/1:5,0:5:14.87:105,15,0	1/1:4,0:4:7.39:27,7,0	1/1:5,0:5:14.61:90,15,0	1/1:12,0:12:17.02:160,17,0	1/1:19,0:19:47.52:339,48,0	1/1:5,0:5:4.76:37,5,0	1/1:0,5:5:15.05:188,15,0	1/1:0,14:14:30.10:382,30,0	1/1:0,1:1:3.01:42,3,0	1/1:8,0:8:7.94:98,8,0	1/1:7,0:7:20.30:123,20,0	1/1:14,0:14:38.65:274,39,0	1/1:9,0:9:20.41:119,20,0
chr10	94026119	.	AT	A	5065.92	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=-2.718;DP=203;FS=31.018;HRun=3;HaplotypeScore=69.0540;InbreedingCoeff=0.6295;MQ=71.73;MQ0=0;MQRankSum=-5.481;QD=28.62;ReadPosRankSum=3.954;VQSLOD=2.9273;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:8.79:53,9,0	1/1:1,2:3:6.02:74,6,0	0/0:18,0:13:18.28:0,18,149	0/0:5,0:4:9.15:0,9,34	1/1:0,12:12:30.05:346,30,0	1/1:1,5:6:14.98:154,15,0	1/1:0,6:6:15.04:168,15,0	1/1:1,11:10:28.64:337,29,0	1/1:1,2:3:3.01:37,3,0	1/1:1,8:9:24.07:294,24,0	1/1:2,8:10:21.04:258,21,0	1/1:0,1:1:3.01:33,3,0	1/1:0,5:5:15.04:166,15,0	1/1:0,2:2:6.02:66,6,0	1/1:0,8:8:24.03:279,24,0	1/1:0,5:5:15.05:185,15,0	1/1:3,0:3:8.79:51,9,0	1/1:0,5:5:15.05:185,15,0	1/1:3,7:10:21.01:241,21,0	1/1:2,13:15:39.12:481,39,0	1/1:0,2:2:6.02:74,6,0	1/1:0,5:5:15.04:166,15,0	1/1:2,12:14:27.01:285,27,0	./.	1/1:1,7:8:18.01:205,18,0	1/1:0,7:7:21.07:260,21,0	1/1:1,12:13:33.10:407,33,0	1/1:1,8:9:21.07:260,21,0
chr10	94026120	.	T	TA	362.93	PASS	AB=1.000;AC=23;AF=0.426;AN=54;BaseQRankSum=0.511;DP=196;FS=7.753;HRun=1;HaplotypeScore=87.1873;InbreedingCoeff=0.5046;MQ=72.29;MQ0=0;MQRankSum=-2.210;QD=3.59;ReadPosRankSum=-0.125;VQSLOD=-0.2421;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,3:4:9.03:138,9,0	0/0:3,0:3:5.37:0,5,22	0/1:20,0:13:6.16:6,0,94	0/1:6,0:4:1.35:1,0,10	0/0:12,0:12:3.70:0,4,30	1/1:5,0:5:10.22:32,10,0	1/1:6,0:6:11.71:39,12,0	0/1:12,0:10:2.56:3,0,11	0/0:2,0:2:1.25:0,1,3	0/1:9,0:9:0.23:0,0,24	0/0:9,0:9:12.03:0,12,49	1/1:1,0:1:2.37:8,2,0	1/1:5,0:5:11.71:37,12,0	1/1:2,0:2:4.59:15,5,0	0/0:8,0:8:11.60:0,12,38	0/0:5,0:5:6.23:0,6,17	1/1:0,3:3:9.03:137,9,0	0/0:5,0:5:6.23:0,6,16	0/1:9,0:9:12.41:12,0,45	0/0:13,0:13:16.51:0,17,43	0/0:2,0:2:2.49:0,2,6	1/1:5,0:5:11.25:37,11,0	1/1:14,0:14:21.75:69,22,0	./.	0/0:8,0:8:11.98:0,12,48	0/0:7,0:7:8.72:0,9,22	0/0:12,0:12:14.01:0,14,36	0/0:9,0:9:8.72:0,9,22
chr10	94026247	.	TC	T	413.16	PASS	AC=14;AF=1.000;AN=14;DP=34;FS=0.000;HRun=6;HaplotypeScore=21.1390;MQ=23.62;MQ0=8;QD=19.67;VQSLOD=1.6989;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,1:2:3.01:32,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:32,3,0	1/1:0,1:1:3.01:32,3,0	./.	./.	./.	1/1:0,5:5:15.04:161,15,0	./.	./.	./.	./.	1/1:0,8:8:15.04:161,15,0	./.	1/1:0,2:2:3.01:32,3,0	1/1:1,1:1:3.01:32,3,0
chr10	94027895	.	TG	T	2272.42	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-6.978;DP=349;FS=1.069;HRun=1;HaplotypeScore=107.1215;InbreedingCoeff=0.9604;MQ=73.67;MQ0=0;MQRankSum=-1.171;QD=31.56;ReadPosRankSum=1.016;VQSLOD=3.4211;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:35.47:0,35,227	0/0:6,0:6:14.75:0,15,93	0/0:12,0:11:33.03:0,33,384	0/0:11,0:12:34.35:0,34,464	0/0:20,0:20:47.12:0,47,293	1/1:2,9:11:33.06:420,33,0	1/1:0,7:7:15.05:208,15,0	0/0:24,0:24:68.12:0,68,466	0/0:15,0:15:41.38:0,41,265	0/0:18,0:18:47.38:0,47,329	0/0:17,0:17:44.43:0,44,324	1/1:0,12:12:27.09:374,27,0	1/1:0,7:7:18.06:249,18,0	1/1:1,5:6:18.03:228,18,0	0/0:15,0:15:41.35:0,41,262	0/0:8,0:8:23.63:0,24,150	0/0:6,0:6:17.74:0,18,113	0/0:2,0:2:5.91:0,6,38	0/0:25,0:25:47.79:0,48,455	0/0:12,0:12:35.36:0,35,222	0/0:15,0:15:32.55:0,33,225	1/1:0,6:6:18.03:228,18,0	1/1:1,9:10:30.06:378,30,0	1/1:2,11:13:32.99:392,33,0	0/0:10,0:10:26.70:0,27,201	0/0:18,0:18:50.34:0,50,338	0/0:21,0:21:53.28:0,53,368	0/0:3,0:3:8.84:0,9,55
chr10	94027896	.	G	GT	6782.99	PASS	AB=0.778;AC=36;AF=0.643;AN=56;BaseQRankSum=-5.135;DP=360;FS=4.853;HRun=7;HaplotypeScore=100.7641;InbreedingCoeff=0.7542;MQ=75.11;MQ0=0;MQRankSum=-2.770;QD=24.94;ReadPosRankSum=-0.791;VQSLOD=4.4585;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,13:18:33.10:398,33,0	1/1:1,5:6:12.04:145,12,0	0/0:14,0:13:0.92:0,1,135	0/0:12,0:12:29.10:0,29,287	1/1:2,18:20:42.04:474,42,0	0/0:11,0:11:9.58:0,10,27	0/0:7,0:7:7.77:0,8,20	1/1:4,20:24:57.12:659,57,0	1/1:2,15:17:48.06:547,48,0	1/1:3,14:17:39.12:471,39,0	1/1:4,14:18:30.05:346,30,0	0/1:12,0:12:1.50:2,0,10	0/0:8,0:8:9.02:0,9,23	0/0:6,0:6:7.77:0,8,21	1/1:1,14:15:39.12:471,39,0	1/1:2,6:8:18.06:217,18,0	1/1:2,6:8:17.91:217,18,0	1/1:0,2:2:3.01:36,3,0	1/1:4,21:25:40.01:727,40,0	1/1:1,11:13:36.11:433,36,0	1/1:4,11:15:24.07:290,24,0	0/0:6,0:6:7.46:0,7,20	0/0:11,0:11:12.43:0,12,33	0/0:13,0:13:13.98:0,14,37	0/1:2,8:10:4.87:229,0,5	1/1:3,16:19:45.14:543,45,0	1/1:8,14:22:42.13:505,42,0	1/1:1,2:3:6.02:72,6,0
chr10	94027936	.	A	AAAATCTGCATGT	27307.32	PASS	AC=48;AF=0.923;AN=52;BaseQRankSum=-2.204;DP=261;FS=14.787;HRun=0;HaplotypeScore=122.7692;InbreedingCoeff=0.7357;MQ=87.48;MQ0=1;MQRankSum=-8.341;QD=118.21;ReadPosRankSum=3.034;VQSLOD=4.7038;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,5:13:24.08:1377,24,0	1/1:1,2:3:3.01:183,3,0	0/0:16,0:16:37.62:0,38,1058	0/0:14,0:13:38.58:0,39,821	1/1:5,6:11:27.05:1311,27,0	1/1:4,2:6:18.05:798,18,0	1/1:3,1:4:12.03:528,12,0	1/1:13,3:25:67.57:3161,68,0	1/1:5,9:14:42.14:2475,42,0	1/1:3,5:8:21.07:1096,21,0	1/1:5,8:13:21.07:1178,21,0	1/1:2,0:2:6.01:137,6,0	1/1:4,5:9:27.06:1358,27,0	1/1:4,2:6:12.04:675,12,0	1/1:7,4:10:24.05:1170,24,0	1/1:4,2:6:12.04:700,12,0	1/1:7,3:10:27.09:1458,27,0	./.	1/1:11,6:17:42.08:1753,42,0	1/1:4,3:7:21.07:1165,21,0	1/1:6,4:10:18.03:876,18,0	1/1:1,1:2:3.01:183,3,0	1/1:3,1:5:9.03:464,9,0	1/1:10,5:15:21.07:1202,21,0	1/1:6,3:9:18.06:956,18,0	1/1:6,7:13:36.10:1515,36,0	1/1:5,7:12:36.02:1589,36,0	./.
chr10	94027992	.	T	TAC	13410.59	PASS	AB=0.667;AC=51;AF=0.911;AN=56;BaseQRankSum=0.647;DP=351;FS=0.000;HRun=0;HaplotypeScore=84.1141;InbreedingCoeff=0.6991;MQ=62.90;MQ0=0;MQRankSum=-4.808;QD=40.27;ReadPosRankSum=4.009;VQSLOD=6.4962;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,10:13:34.65:499,35,0	1/1:1,3:4:12.04:170,12,0	0/0:8,0:8:18.06:0,18,289	0/0:10,0:10:20.75:0,21,308	1/1:1,22:23:59.78:817,60,0	1/1:0,15:15:45.15:829,45,0	1/1:0,7:7:15.05:279,15,0	1/1:3,21:25:54.79:972,55,0	1/1:3,10:13:35.31:521,35,0	1/1:3,21:24:66.15:978,66,0	1/1:3,12:15:39.11:562,39,0	1/1:1,6:8:18.06:330,18,0	1/1:0,10:11:30.10:549,30,0	1/1:0,8:8:24.08:437,24,0	1/1:1,7:7:3.07:246,3,0	1/1:2,4:6:12.01:188,12,0	1/1:1,7:8:21.07:329,21,0	0/1:1,1:2:10.64:41,0,11	1/1:5,11:16:41.83:596,42,0	1/1:3,10:13:32.76:429,33,0	1/1:2,5:7:17.41:232,17,0	1/1:0,18:19:51.17:947,51,0	1/1:0,17:16:45.15:835,45,0	1/1:0,11:11:27.09:470,27,0	1/1:1,12:13:36.10:526,36,0	1/1:3,17:20:48.11:721,48,0	1/1:4,13:17:38.58:537,39,0	1/1:2,8:10:26.21:372,26,0
chr10	94027999	.	T	TA	6225.75	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-5.952;DP=372;FS=3.993;HRun=1;HaplotypeScore=101.7969;InbreedingCoeff=0.9670;MQ=63.49;MQ0=0;MQRankSum=-2.850;QD=24.41;ReadPosRankSum=0.074;VQSLOD=4.7371;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,9:14:33.79:301,34,0	1/1:0,3:3:9.02:97,9,0	0/0:8,0:8:17.88:0,18,175	0/0:12,0:11:24.42:0,24,257	1/1:7,20:27:72.39:596,72,0	0/0:16,0:16:41.89:0,42,384	0/0:7,0:7:14.91:0,15,126	1/1:10,16:26:66.11:646,66,0	1/1:4,9:13:31.78:334,32,0	1/1:5,20:25:71.90:736,72,0	1/1:4,11:15:35.78:321,36,0	0/0:9,0:9:23.86:0,24,203	0/0:10,0:10:23.86:0,24,200	0/0:7,0:7:17.83:0,18,134	1/1:1,7:7:20.90:186,21,0	1/1:6,4:10:26.94:250,27,0	1/1:3,6:9:23.81:197,24,0	1/1:1,1:2:6.01:59,6,0	1/1:8,10:18:47.22:434,47,0	1/1:5,10:15:44.81:383,45,0	1/1:4,4:8:17.91:167,18,0	0/0:20,0:20:56.32:0,56,431	0/0:18,0:17:47.39:0,47,334	0/0:10,0:10:22.24:0,22,137	1/1:2,11:13:33.84:352,34,0	1/1:7,14:21:47.08:474,47,0	1/1:6,12:18:44.54:420,45,0	1/1:2,8:10:27.35:273,27,0
chr10	94028326	.	G	GCA	3617.58	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=5.080;DP=335;FS=8.260;HRun=0;HaplotypeScore=118.4625;InbreedingCoeff=0.8875;MQ=67.71;MQ0=3;MQRankSum=-7.049;QD=53.20;ReadPosRankSum=2.098;VQSLOD=3.5933;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:48.16:0,48,761	0/0:4,0:3:9.03:0,9,147	0/0:13,0:12:15.70:0,16,382	0/0:6,0:6:15.04:0,15,216	0/0:23,0:23:51.16:0,51,806	1/1:0,12:12:30.10:604,30,0	1/1:0,10:10:21.07:423,21,0	0/0:24,0:24:66.22:0,66,1055	0/0:11,0:11:27.08:0,27,412	0/0:29,0:28:78.27:0,78,1301	0/0:14,0:13:33.11:0,33,537	1/1:0,7:7:18.06:363,18,0	1/1:0,2:2:6.02:120,6,0	1/1:0,8:8:21.07:423,21,0	0/0:10,0:10:27.09:0,27,440	0/0:7,0:7:15.05:0,15,244	0/0:2,0:2:2.58:0,3,48	0/0:2,0:2:6.02:0,6,98	0/0:10,0:9:24.04:0,24,361	0/0:17,0:14:39.13:0,39,637	0/0:7,0:7:9.03:0,9,147	1/1:0,12:12:36.12:723,36,0	1/1:0,15:15:42.14:842,42,0	1/1:0,2:2:6.02:120,6,0	0/0:15,0:14:39.12:0,39,616	0/0:21,0:20:45.15:0,45,731	0/0:20,0:20:39.09:0,39,607	0/0:11,0:11:30.09:0,30,464
chr10	94028346	.	AT	A	5048.22	PASS	AB=0.875;AC=49;AF=0.942;AN=52;BaseQRankSum=3.031;DP=285;FS=13.528;HRun=2;HaplotypeScore=105.5260;InbreedingCoeff=0.3243;MQ=58.36;MQ0=3;MQRankSum=-3.622;QD=19.12;ReadPosRankSum=5.463;VQSLOD=3.7191;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:15.01:137,15,0	./.	0/0:15,0:12:30.10:0,30,421	0/1:6,1:5:23.17:23,0,94	1/1:0,19:19:43.88:443,44,0	1/1:2,13:15:29.89:229,30,0	1/1:0,5:5:8.96:68,9,0	1/1:3,15:18:38.81:570,39,0	1/1:1,5:6:12.02:133,12,0	1/1:4,17:20:48.02:550,48,0	1/1:3,10:12:2.76:142,3,0	1/1:0,6:6:8.97:69,9,0	1/1:0,2:2:5.97:45,6,0	1/1:0,4:4:11.94:89,12,0	1/1:0,9:9:21.04:226,21,0	1/1:1,6:7:6.98:116,7,0	1/1:1,1:2:2.95:22,3,0	1/1:1,1:2:3.01:39,3,0	1/1:1,12:12:33.08:366,33,0	1/1:1,14:12:24.04:246,24,0	./.	1/1:1,11:12:14.91:110,15,0	1/1:2,12:14:23.91:194,24,0	1/1:0,3:3:2.94:22,3,0	1/1:1,12:12:29.52:326,30,0	1/1:1,15:15:33.06:363,33,0	1/1:0,17:17:30.05:309,30,0	1/1:4,7:11:23.63:210,24,0
chr10	94028351	.	ATATATATG	A	2680.23	PASS	AB=1.000;AC=33;AF=0.635;AN=52;BaseQRankSum=10.975;DP=285;FS=16.648;HRun=0;HaplotypeScore=141.8444;InbreedingCoeff=0.0040;MQ=52.28;MQ0=3;MQRankSum=-7.901;QD=11.31;ReadPosRankSum=9.971;VQSLOD=0.3040;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:10.37:29,10,0	./.	0/0:15,0:10:15.04:0,15,444	0/1:7,0:4:26.64:27,0,100	0/1:18,0:18:18.42:18,0,146	1/1:2,11:13:30.10:685,30,0	1/1:2,3:5:9.03:205,9,0	0/0:19,0:19:20.65:0,21,384	0/0:6,0:6:0.54:0,1,44	0/1:19,0:18:61.29:82,0,61	0/1:14,0:13:4:4,0,136	1/1:2,4:6:9.03:206,9,0	1/1:0,2:2:6.02:136,6,0	1/1:0,4:4:12.04:272,12,0	0/1:10,0:10:5.24:5,0,103	0/1:7,0:7:7.04:7,0,46	1/1:3,0:3:3.01:45,3,0	0/0:2,0:2:2.98:0,3,21	0/1:15,0:14:20.19:20,0,172	0/1:17,0:14:27.56:28,0,58	./.	1/1:6,5:11:15.05:339,15,0	1/1:4,8:12:24.08:530,24,0	1/1:1,2:3:5.85:82,6,0	0/1:14,0:13:38.22:38,0,60	0/1:17,0:15:12.49:12,0,103	0/1:18,0:18:27.91:28,0,107	1/1:8,0:8:11.39:43,11,0
chr10	94028355	.	ATATG	A	5853.26	PASS	AB=0.833;AC=48;AF=0.923;AN=52;BaseQRankSum=4.615;DP=288;FS=2.282;HRun=0;HaplotypeScore=113.3253;InbreedingCoeff=0.2458;MQ=47.84;MQ0=1;MQRankSum=-2.234;QD=21.60;ReadPosRankSum=4.683;VQSLOD=4.3069;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,6:12:15.05:203,15,0	./.	0/0:11,0:6:9.03:0,9,186	0/1:8,0:5:34.45:34,0,49	1/1:5,13:18:14.95:395,15,0	1/1:13,0:13:30.10:446,30,0	1/1:6,0:6:11.95:150,12,0	1/1:14,3:17:7.26:167,7,0	1/1:4,3:7:14.76:144,15,0	1/1:10,9:18:42.09:599,42,0	1/1:6,8:14:8.11:276,8,0	1/1:6,0:6:9.03:134,9,0	1/1:5,0:5:14.90:149,15,0	1/1:5,0:5:14.97:193,15,0	0/1:5,5:10:8.42:147,0,8	1/1:2,5:7:11.71:135,12,0	1/1:3,0:3:3.01:43,3,0	1/1:3,0:3:3:25,3,0	1/1:9,7:15:12.25:314,12,0	1/1:9,7:15:10.99:280,11,0	./.	1/1:12,0:12:18.05:244,18,0	1/1:13,0:12:27.07:362,27,0	1/1:4,0:4:8.81:75,9,0	1/1:5,10:14:25.51:443,26,0	1/1:9,7:14:18.03:234,18,0	1/1:4,14:18:10.76:341,11,0	1/1:1,7:8:24.07:322,24,0
chr10	94028450	.	T	TC	155.15	PASS	AB=0.556;AC=1;AF=0.018;AN=56;BaseQRankSum=-1.882;DP=368;FS=0.000;HRun=7;HaplotypeScore=47.2040;InbreedingCoeff=0.2982;MQ=70.67;MQ0=2;MQRankSum=0.912;QD=15.51;ReadPosRankSum=-0.747;VQSLOD=2.7418;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:51.06:0,51,486	0/0:13,0:13:36.05:0,36,348	0/0:13,0:12:25.06:0,25,214	0/0:7,0:5:8.75:0,9,70	0/0:22,0:22:57.09:0,57,550	0/0:11,0:11:33.05:0,33,318	0/0:6,0:6:15.01:0,15,139	0/0:23,1:24:30.69:0,31,495	0/0:5,0:5:12.02:0,12,116	0/0:17,0:16:42.04:0,42,405	0/0:18,0:18:48.08:0,48,463	0/0:8,0:8:21.02:0,21,196	0/0:7,0:7:17.98:0,18,163	0/0:13,0:13:30.04:0,30,290	0/0:7,0:7:21.03:0,21,203	0/0:11,0:11:30:0,30,280	0/1:2,8:10:4.90:230,0,5	0/0:8,0:8:21.03:0,21,203	0/0:17,0:16:48.04:0,48,455	0/0:24,0:24:54.08:0,54,520	0/0:12,0:12:18.02:0,18,174	0/0:10,0:10:27.04:0,27,261	0/0:20,0:20:48.08:0,48,463	0/0:8,0:8:18.02:0,18,173	0/0:15,0:15:39.06:0,39,377	0/0:11,0:11:33.05:0,33,318	0/0:21,0:21:51.07:0,51,492	0/0:8,0:8:21.03:0,21,203
chr10	94029088	.	A	AAAG	20063.77	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.113;DP=484;FS=2.738;HRun=0;HaplotypeScore=89.4066;InbreedingCoeff=0.8658;MQ=58.80;MQ0=2;MQRankSum=-5.105;QD=44.79;ReadPosRankSum=5.175;VQSLOD=6.0728;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:28:60.15:1292,60,0	1/1:1,10:10:24.08:542,24,0	0/0:21,0:17:43.65:0,44,635	0/0:15,0:13:30.52:0,31,461	1/1:4,24:27:60.16:1306,60,0	1/1:1,25:25:45.15:1017,45,0	1/1:2,6:7:12.04:271,12,0	1/1:2,2:6:11.98:140,12,0	1/1:0,11:9:24.08:543,24,0	1/1:4,27:30:72.25:1588,72,0	1/1:4,16:17:36.12:813,36,0	1/1:1,12:12:24.08:543,24,0	1/1:1,13:10:14.84:339,15,0	1/1:1,14:11:24.08:543,24,0	1/1:0,11:10:23.88:542,24,0	1/1:1,9:8:21.07:447,21,0	1/1:0,10:8:15.05:339,15,0	1/1:0,23:23:60.21:1332,60,0	1/1:2,7:6:18.06:408,18,0	1/1:1,24:24:54.19:1219,54,0	1/1:0,20:19:51.04:1101,51,0	1/1:5,28:28:57.11:1203,57,0	1/1:2,20:22:45.15:1017,45,0	1/1:1,13:11:24.08:544,24,0	1/1:1,15:14:36.10:735,36,0	1/1:0,25:21:60.21:1358,60,0	1/1:0,16:14:36.12:813,36,0	1/1:0,1:1:3.01:68,3,0
chr10	94029185	.	T	TC	373.14	PASS	AB=0.646;AC=30;AF=0.577;AN=52;BaseQRankSum=8.982;DP=292;FS=87.830;HRun=0;HaplotypeScore=71.0664;InbreedingCoeff=0.6599;MQ=59.02;MQ0=10;MQRankSum=-7.277;QD=5.65;ReadPosRankSum=-1.974;VQSLOD=-0.2794;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:2,3:5:8.44:18,0,8	1/1:0,5:4:8.51:42,9,0	0/0:29,0:22:62.71:0,63,794	0/0:35,0:25:68.52:0,69,952	1/1:0,2:2:5.27:21,5,0	0/0:23,0:23:48.16:0,48,671	0/0:12,0:12:33.11:0,33,461	1/1:1,3:3:5.95:44,6,0	1/1:2,3:4:8.69:63,9,0	1/1:0,1:1:2.94:18,3,0	1/1:0,2:2:2.80:13,3,0	0/0:22,0:20:36.12:0,36,503	0/0:17,0:16:39.13:0,39,544	0/0:15,0:14:36.12:0,36,497	0/1:4,4:7:2.52:68,0,3	1/1:0,3:2:2.84:14,3,0	1/1:0,4:4:11.32:55,11,0	1/1:1,3:4:8.77:51,9,0	./.	1/1:2,1:3:2.74:12,3,0	1/1:0,2:2:5.59:26,6,0	0/0:30,0:29:63.09:0,63,814	0/0:22,0:21:30.07:0,30,398	0/0:20,0:20:36.05:0,36,480	1/1:0,8:4:10.97:50,11,0	1/1:2,3:2:5.91:39,6,0	1/1:1,4:3:5.58:26,6,0	./.
chr10	94029292	.	GT	G	1387.08	PASS	AC=34;AF=0.895;AN=38;BaseQRankSum=0.508;DP=174;FS=46.881;HRun=6;HaplotypeScore=28.0770;InbreedingCoeff=0.4608;MQ=53.43;MQ0=12;MQRankSum=0.355;QD=12.28;ReadPosRankSum=3.429;VQSLOD=-0.4177;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,3:3:3.01:32,3,0	0/0:28,1:11:24.65:0,25,336	0/0:18,0:10:26.82:0,27,250	1/1:1,11:10:15.04:158,15,0	1/1:2,7:9:12.03:129,12,0	1/1:0,2:2:6.02:64,6,0	./.	./.	1/1:4,11:15:24.06:258,24,0	1/1:2,6:4:3.01:32,3,0	./.	1/1:2,4:6:9.02:96,9,0	1/1:1,5:5:9.02:95,9,0	./.	1/1:0,2:1:3.01:32,3,0	./.	./.	./.	1/1:1,4:4:9.02:97,9,0	./.	1/1:2,11:10:18.04:190,18,0	1/1:2,4:5:6.02:64,6,0	1/1:1,5:6:6.02:64,6,0	1/1:3,4:6:3.01:32,3,0	1/1:1,3:2:3.01:32,3,0	1/1:1,4:4:6.02:64,6,0	1/1:0,4:4:6.02:64,6,0
chr10	94030042	.	CT	C	3540.73	PASS	AC=48;AF=1.000;AN=48;DP=254;FS=0.000;HRun=7;HaplotypeScore=28.9748;InbreedingCoeff=-0.0444;MQ=27.86;MQ0=98;QD=15.07;VQSLOD=1.7559;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:10:12.03:122,12,0	1/1:0,3:3:6.01:61,6,0	./.	./.	1/1:0,7:2:3.01:30,3,0	1/1:1,8:5:12.03:122,12,0	1/1:0,11:9:18.04:183,18,0	1/1:2,16:10:27.06:275,27,0	1/1:1,12:10:21.05:214,21,0	1/1:1,5:3:9.01:86,9,0	1/1:3,3:1:3.01:31,3,0	1/1:0,8:5:15.03:153,15,0	1/1:0,10:5:12.03:122,12,0	1/1:0,5:4:9.02:92,9,0	1/1:1,5:4:9.02:92,9,0	1/1:0,6:6:18.04:183,18,0	1/1:0,15:14:36.08:367,36,0	1/1:0,14:9:21.05:214,21,0	1/1:2,13:12:33.07:336,33,0	1/1:0,11:5:9.02:92,9,0	1/1:1,9:5:6.01:61,6,0	./.	./.	1/1:1,6:7:18.04:183,18,0	1/1:1,2:2:6.01:61,6,0	1/1:2,14:8:15.03:153,15,0	1/1:2,10:8:18.04:183,18,0	1/1:0,9:5:12.03:122,12,0
chr10	94030473	.	TA	T	896.74	PASS	AC=34;AF=0.895;AN=38;BaseQRankSum=-0.230;DP=95;FS=18.359;HRun=2;HaplotypeScore=45.6084;InbreedingCoeff=0.2732;MQ=57.39;MQ0=5;MQRankSum=-2.102;QD=11.35;ReadPosRankSum=1.734;VQSLOD=0.3228;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:2:6:51,6,0	1/1:0,2:2:2.80:7,3,0	0/0:4,0:3:5.99:0,6,61	0/0:2,0:1:3.01:0,3,45	1/1:0,13:13:13.35:106,13,0	1/1:0,9:2:6.01:56,6,0	1/1:0,1:1:3:25,3,0	./.	1/1:0,1:1:3:26,3,0	1/1:0,1:1:2.92:17,3,0	1/1:0,7:7:9.79:50,10,0	1/1:0,2:1:3:26,3,0	./.	./.	1/1:0,3:1:2.98:22,3,0	./.	./.	1/1:0,1:1:3:28,3,0	./.	1/1:0,15:15:43.24:369,43,0	./.	1/1:0,8:7:15.73:110,16,0	1/1:0,5:4:4.62:11,5,0	./.	1/1:0,3:3:5.80:33,6,0	1/1:0,3:1:3.01:31,3,0	./.	1/1:0,1:1:3:28,3,0
chr10	94030476	.	GT	G	809.25	PASS	AB=0.750;AC=34;AF=0.895;AN=38;BaseQRankSum=1.765;DP=91;FS=14.777;HRun=2;HaplotypeScore=45.9497;InbreedingCoeff=0.0743;MQ=58.64;MQ0=1;MQRankSum=-0.401;QD=9.75;ReadPosRankSum=1.792;VQSLOD=-0.1671;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:2:5.97:45,6,0	1/1:0,2:2:3.63:10,4,0	0/1:4,0:3:4.99:5,0,16	0/0:2,0:1:2.90:0,3,16	0/1:0,13:13:7.64:76,0,8	1/1:0,9:2:5.99:50,6,0	1/1:0,1:1:2.98:22,3,0	./.	1/1:0,1:1:2.99:23,3,0	1/1:0,1:1:2.84:14,3,0	1/1:0,7:7:14.52:62,15,0	1/1:0,2:1:2.99:23,3,0	./.	./.	1/1:0,3:1:2.94:18,3,0	./.	./.	1/1:0,1:1:3:25,3,0	./.	1/1:0,15:15:43.66:328,44,0	./.	1/1:0,8:7:17.38:103,17,0	1/1:0,5:4:6.01:18,6,0	./.	1/1:0,3:3:6.36:32,6,0	1/1:0,3:1:3:28,3,0	./.	1/1:0,1:1:3:25,3,0
chr10	94030485	.	TTA	T	1107.84	PASS	AB=0.769;AC=18;AF=0.375;AN=48;BaseQRankSum=7.736;DP=286;FS=8.359;HRun=0;HaplotypeScore=74.4659;InbreedingCoeff=-0.3731;MQ=36.66;MQ0=1;MQRankSum=-1.339;QD=4.95;ReadPosRankSum=2.800;VQSLOD=0.9737;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,4:7:37.74:38,0,112	0/1:2,2:4:60.39:60,0,62	0/0:5,0:2:3.90:0,4,59	0/0:3,0:1:3.01:0,3,35	0/1:10,13:23:99:142,0,148	1/1:11,9:4:2.29:55,2,0	1/1:1,1:1:3:26,3,0	./.	0/1:9,1:4:18.33:18,0,91	0/0:9,1:10:7.36:0,7,230	0/1:16,7:21:99:153,0,319	0/1:10,2:5:18.72:19,0,95	0/0:4,1:3:4.82:0,5,39	./.	0/1:5,3:2:0.89:26,0,1	0/0:8,2:4:8.06:0,8,78	0/0:4,1:2:2.98:0,3,21	0/1:3,1:3:29.19:29,0,30	./.	0/1:25,15:39:99:348,0,632	0/0:1,0:1:3.01:0,3,36	0/1:8,8:11:92.78:198,0,93	0/1:12,5:13:43.69:44,0,254	./.	0/1:8,3:11:70.49:70,0,232	0/1:11,3:10:9.33:9,0,215	0/0:14,1:9:14.66:0,15,93	0/1:9,1:8:8.63:9,0,180
chr10	94030912	.	GT	G	9579.24	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.000;DP=471;FS=7.432;HRun=7;HaplotypeScore=75.9985;InbreedingCoeff=0.9342;MQ=72.56;MQ0=0;MQRankSum=-7.832;QD=22.12;ReadPosRankSum=4.540;VQSLOD=4.5691;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:47.89:464,48,0	1/1:1,6:7:15.03:153,15,0	0/0:20,0:18:35.18:0,35,358	0/0:18,0:17:22.44:0,22,323	1/1:2,28:30:66.04:649,66,0	1/1:0,18:18:54.12:551,54,0	1/1:3,16:19:27.06:275,27,0	1/1:1,15:16:44.74:422,45,0	1/1:0,9:9:27.06:275,27,0	1/1:1,13:14:39.09:398,39,0	1/1:3,20:22:42:414,42,0	1/1:4,8:12:24.05:245,24,0	1/1:3,11:14:30.07:306,30,0	1/1:1,13:14:33.07:336,33,0	1/1:1,11:12:30.07:306,30,0	1/1:0,10:10:23.97:245,24,0	1/1:4,15:19:36.08:367,36,0	1/1:3,16:19:42.09:428,42,0	1/1:3,20:22:60.13:611,60,0	1/1:0,27:27:53.99:524,54,0	1/1:1,12:13:30.06:306,30,0	1/1:0,15:15:27.06:275,27,0	1/1:1,18:19:26.71:264,27,0	1/1:3,12:15:33.07:336,33,0	1/1:1,13:14:30.07:306,30,0	1/1:1,17:18:51.08:510,51,0	1/1:5,20:25:54.12:551,54,0	1/1:1,3:4:6.01:61,6,0
chr10	94031590	.	CTG	C	18316.90	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.029;DP=534;FS=0.000;HRun=0;HaplotypeScore=106.3836;InbreedingCoeff=0.9849;MQ=57.14;MQ0=2;MQRankSum=2.105;QD=37.46;ReadPosRankSum=5.652;VQSLOD=6.9850;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:78.26:1148,78,0	1/1:1,9:10:27.09:398,27,0	0/0:24,0:15:45.02:0,45,721	0/0:21,0:10:24.03:0,24,391	1/1:1,22:23:54.18:794,54,0	1/1:0,10:10:30.10:441,30,0	1/1:1,17:18:45.15:663,45,0	1/1:1,21:22:63.21:926,63,0	1/1:1,17:18:51.17:751,51,0	1/1:1,15:16:45.15:655,45,0	1/1:0,17:17:33.11:486,33,0	1/1:0,11:11:27.09:397,27,0	1/1:0,8:8:18.06:265,18,0	1/1:0,24:24:69.23:1015,69,0	1/1:1,24:25:54.18:794,54,0	1/1:0,15:15:39.13:574,39,0	1/1:0,28:28:72.24:1060,72,0	1/1:0,13:13:36.12:530,36,0	1/1:1,13:14:39.13:574,39,0	1/1:0,29:29:81.27:1191,81,0	1/1:1,29:30:75.25:1105,75,0	1/1:1,21:22:51.17:751,51,0	1/1:0,19:19:45.15:663,45,0	1/1:0,25:25:63.21:928,63,0	1/1:0,10:10:30.10:442,30,0	1/1:0,23:23:66.22:972,66,0	1/1:1,19:20:38.94:574,39,0	1/1:0,5:5:15.05:221,15,0
chr10	94032196	.	CT	C	332.38	PASS	AB=0.833;AC=15;AF=0.357;AN=42;BaseQRankSum=1.372;DP=195;FS=0.000;HRun=9;HaplotypeScore=47.1651;InbreedingCoeff=0.6692;MQ=28.54;MQ0=48;MQRankSum=-2.911;QD=10.72;ReadPosRankSum=0.442;VQSLOD=1.7778;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/1:4,1:5:19.06:19,0,35	./.	./.	0/0:15,0:15:27.08:0,27,311	1/1:0,7:7:18.01:165,18,0	1/1:0,2:2:6:55,6,0	0/0:16,0:14:30.05:0,30,329	./.	0/0:14,0:14:27.04:0,27,297	0/0:8,0:8:15.04:0,15,169	1/1:3,1:4:3:27,3,0	1/1:0,4:4:5.94:55,6,0	1/1:0,1:1:3:27,3,0	0/0:5,0:5:9.03:0,9,101	0/0:7,0:7:9.03:0,9,104	0/0:11,0:3:8.98:0,9,89	./.	0/0:14,0:11:30.09:0,30,346	0/0:9,0:9:18.05:0,18,208	./.	1/1:0,4:4:9:82,9,0	1/1:1,3:4:6:55,6,0	./.	0/0:7,0:7:15.04:0,15,169	0/0:10,0:10:21.06:0,21,242	0/0:3,0:3:6.02:0,6,69	0/0:9,0:4:9.03:0,9,103
chr10	94032219	.	TTC	T	59.17	PASS	AB=0.905;AC=10;AF=0.227;AN=44;BaseQRankSum=1.677;DP=161;FS=0.000;HRun=0;HaplotypeScore=48.6614;InbreedingCoeff=0.0004;MQ=26.55;MQ0=51;MQRankSum=-2.715;QD=0.99;ReadPosRankSum=-3.253;VQSLOD=0.4395;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:4:2.80:13,3,0	0/0:3,0:3:6.01:0,6,60	./.	./.	0/1:12,1:13:10.71:11,0,227	0/0:6,0:6:18:0,18,197	./.	0/0:6,0:5:14.97:0,15,133	1/1:1,1:2:3.01:39,3,0	0/0:8,0:8:18:0,18,161	0/0:6,0:6:15.03:0,15,149	0/0:1,0:1:3.01:0,3,35	0/0:3,0:3:6.02:0,6,70	./.	0/0:3,0:3:6.01:0,6,61	0/0:6,0:6:7.26:0,7,63	0/0:9,0:2:6.01:0,6,61	0/0:3,0:1:0.89:0,1,2	0/1:11,1:10:17.78:18,0,190	0/1:5,2:7:19.63:20,0,132	./.	0/1:2,0:2:22.18:22,0,30	0/0:3,0:3:8.99:0,9,92	./.	0/1:7,1:8:33.46:33,0,95	0/0:8,0:7:18.89:0,19,166	0/0:3,0:3:6:0,6,55	0/1:9,1:5:27.27:27,0,78
chr10	94032223	.	T	TTA	3214.14	PASS	AC=44;AF=1.000;AN=44;DP=156;FS=0.000;HRun=0;HaplotypeScore=35.8925;InbreedingCoeff=0.0115;MQ=26.18;MQ0=50;QD=25.71;VQSLOD=3.5207;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:3:3.01:54,3,0	1/1:0,3:3:6.02:107,6,0	./.	./.	1/1:1,12:13:26.92:405,27,0	1/1:6,0:6:16.91:81,17,0	./.	1/1:0,5:4:11.91:117,12,0	1/1:1,1:2:3.01:49,3,0	1/1:1,6:7:12.04:215,12,0	1/1:1,6:7:15.05:268,15,0	1/1:1,0:1:2.80:13,3,0	1/1:3,0:3:5.60:26,6,0	./.	1/1:0,3:3:6.02:107,6,0	1/1:0,5:5:5.96:107,6,0	1/1:0,9:2:6.02:107,6,0	1/1:3,0:1:2.04:6,2,0	1/1:1,11:10:30:412,30,0	1/1:3,5:7:18.06:317,18,0	./.	1/1:2,0:2:5.54:25,6,0	1/1:3,0:3:5.60:25,6,0	./.	1/1:1,6:7:18.06:317,18,0	1/1:3,4:6:15.05:266,15,0	1/1:2,2:4:3.01:54,3,0	1/1:2,8:5:12.04:211,12,0
chr10	94032224	.	T	TA	1462.05	PASS	AC=42;AF=0.955;AN=44;BaseQRankSum=-1.732;DP=146;FS=0.000;HRun=0;HaplotypeScore=40.4621;InbreedingCoeff=0.1606;MQ=25.35;MQ0=49;MQRankSum=-0.729;QD=12.94;ReadPosRankSum=-1.459;VQSLOD=3.4494;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:3:2.90:16,3,0	1/1:3,0:3:5.81:32,6,0	./.	./.	1/1:11,0:11:26.01:142,26,0	1/1:1,5:6:17.97:234,18,0	./.	1/1:5,0:4:11.80:80,12,0	1/1:2,0:2:2.68:11,3,0	1/1:5,0:5:11.61:64,12,0	1/1:7,0:7:14.58:85,15,0	1/1:0,1:1:3.01:43,3,0	1/1:0,2:2:6.02:87,6,0	./.	1/1:3,0:3:5.81:32,6,0	1/1:5,0:5:5.70:32,6,0	1/1:9,0:2:5.81:32,6,0	0/0:3,0:1:1.55:0,2,4	1/1:10,0:8:23.25:134,23,0	1/1:8,0:7:17.32:96,17,0	./.	1/1:0,2:2:6.02:87,6,0	1/1:0,2:2:6.02:87,6,0	./.	1/1:7,0:7:17.33:96,17,0	1/1:6,0:5:14.41:77,14,0	1/1:4,0:4:2.90:16,3,0	1/1:10,0:5:11.51:61,12,0
chr10	94032296	.	T	TC	607.21	PASS	AC=20;AF=0.909;AN=22;BaseQRankSum=-2.540;DP=96;FS=9.777;HRun=4;HaplotypeScore=20.5236;InbreedingCoeff=0.1791;MQ=47.56;MQ0=58;MQRankSum=-2.752;QD=24.29;ReadPosRankSum=2.646;VQSLOD=1.4573;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:32,1:4:4.48:0,4,16	1/1:2,3:3:6.02:82,6,0	./.	./.	./.	1/1:1,1:1:3.01:41,3,0	1/1:0,2:2:6.02:82,6,0	1/1:0,4:4:12.04:164,12,0	1/1:0,1:1:3.01:41,3,0	./.	./.	./.	./.	./.	./.	./.	1/1:0,4:3:3.01:41,3,0	./.	1/1:0,1:1:3.01:35,3,0	./.	./.	1/1:0,4:4:9.03:122,9,0	1/1:0,1:1:3.01:41,3,0	./.	1/1:0,1:1:3.01:41,3,0
chr10	94039442	.	A	AC	3049.18	PASS	AB=0.963;AC=45;AF=0.938;AN=48;BaseQRankSum=5.039;DP=175;FS=6.282;HRun=0;HaplotypeScore=40.5321;InbreedingCoeff=0.2306;MQ=61.28;MQ0=2;MQRankSum=-3.203;QD=19.80;ReadPosRankSum=-0.499;VQSLOD=4.9965;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:16:27.01:396,27,0	1/1:0,3:3:3.01:48,3,0	0/1:25,0:15:9.61:10,0,303	0/0:16,0:10:18.34:0,18,351	1/1:1,11:12:5.82:95,6,0	1/1:0,3:3:8.94:112,9,0	1/1:0,5:5:9.03:143,9,0	1/1:0,8:7:15.05:239,15,0	1/1:0,1:1:3.01:48,3,0	1/1:0,6:6:15.05:236,15,0	1/1:3,10:12:15.05:237,15,0	1/1:1,6:7:14.98:208,15,0	1/1:0,2:2:6.02:94,6,0	1/1:0,3:3:6.02:94,6,0	./.	1/1:0,4:4:9.03:134,9,0	1/1:0,4:4:6.02:96,6,0	1/1:0,3:3:3.01:48,3,0	1/1:1,4:5:2.77:47,3,0	1/1:0,5:5:9.03:143,9,0	./.	./.	./.	1/1:0,4:4:6.02:96,6,0	1/1:1,3:3:6.02:96,6,0	1/1:0,5:4:6.02:96,6,0	1/1:0,5:5:12.04:191,12,0	1/1:0,9:9:17.98:255,18,0
chr10	94040312	.	TA	T	15048.24	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.443;DP=536;FS=9.805;HRun=2;HaplotypeScore=149.3085;InbreedingCoeff=0.9889;MQ=65.65;MQ0=0;MQRankSum=-8.096;QD=30.52;ReadPosRankSum=5.204;VQSLOD=3.2184;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:77.23:543,77,0	1/1:1,13:14:42.12:517,42,0	0/0:27,1:21:30.88:0,31,476	0/0:14,0:12:24.30:0,24,260	1/1:6,19:25:66.14:767,66,0	1/1:2,19:21:60.18:752,60,0	1/1:5,16:21:45.10:522,45,0	1/1:11,16:27:78.15:879,78,0	1/1:1,18:19:54.17:683,54,0	1/1:6,21:27:78.22:945,78,0	1/1:5,21:26:78.19:923,78,0	1/1:2,7:9:27.07:327,27,0	1/1:1,13:14:24.08:303,24,0	1/1:2,8:10:24.08:303,24,0	1/1:1,15:16:42.13:522,42,0	1/1:1,9:10:30.09:369,30,0	1/1:13,0:13:26.82:198,27,0	1/1:1,8:9:18.04:214,18,0	1/1:8,10:18:48.07:538,48,0	1/1:1,20:21:48.15:597,48,0	1/1:0,17:17:33.04:396,33,0	1/1:8,18:26:64.29:754,64,0	1/1:5,23:28:78.22:962,78,0	1/1:3,17:20:51.05:589,51,0	1/1:4,9:13:36.03:398,36,0	1/1:5,21:26:75.17:911,75,0	1/1:4,22:26:78.16:926,78,0	1/1:4,4:8:21:210,21,0
chr10	94040313	.	AAT	A	4417.41	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=3.046;DP=551;FS=1.755;HRun=0;HaplotypeScore=200.5554;InbreedingCoeff=0.2995;MQ=64.93;MQ0=0;MQRankSum=-7.780;QD=8.71;ReadPosRankSum=9.423;VQSLOD=3.4059;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:29:77.90:1064,78,0	1/1:14,0:14:29.59:103,30,0	0/0:30,0:22:49.79:0,50,682	0/0:14,0:12:26.33:0,26,315	1/1:27,0:27:16.18:161,16,0	0/1:24,0:24:30.93:101,0,31	0/1:20,0:20:16.34:125,0,16	1/1:27,1:28:4.15:267,4,0	1/1:21,0:21:37.74:120,38,0	1/1:27,0:27:29.22:184,29,0	1/1:29,0:29:29.83:231,30,0	1/1:10,0:10:0.90:47,1,0	1/1:14,0:14:16.67:50,17,0	1/1:10,0:10:16.79:53,17,0	1/1:16,0:16:29.68:106,30,0	1/1:10,0:10:20.42:77,20,0	1/1:2,10:12:27.06:380,27,0	0/1:9,0:9:8.43:33,0,8	1/1:18,0:18:7.57:173,8,0	0/1:21,0:21:32.82:70,0,33	1/1:17,0:17:21.92:83,22,0	1/1:25,1:26:12.88:195,13,0	1/1:27,1:28:53.99:193,54,0	1/1:22,0:22:19.23:132,19,0	0/1:14,0:14:2.73:47,0,3	1/1:26,0:26:42.67:143,43,0	1/1:27,0:27:48.54:170,49,0	1/1:8,0:8:17.63:112,18,0
chr10	94040332	.	TC	T	13607.99	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.018;DP=541;FS=1.417;HRun=4;HaplotypeScore=156.6528;InbreedingCoeff=0.9685;MQ=69.33;MQ0=0;MQRankSum=-8.901;QD=28.00;ReadPosRankSum=5.508;VQSLOD=3.2514;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,26:33:66.10:727,66,0	1/1:0,13:13:39.12:465,39,0	0/0:38,1:30:68.05:0,68,758	0/0:16,0:14:27.22:0,27,304	1/1:0,27:27:75.14:864,75,0	1/1:3,20:23:51.14:597,51,0	1/1:1,15:16:42.13:499,42,0	1/1:4,21:25:66.16:744,66,0	1/1:5,17:22:54.14:621,54,0	1/1:1,25:26:75.19:857,75,0	1/1:4,25:29:75.18:868,75,0	1/1:2,11:13:36.10:416,36,0	1/1:5,6:11:33.06:351,33,0	1/1:1,12:13:30.09:358,30,0	1/1:0,14:14:42.13:496,42,0	1/1:1,10:11:30.08:346,30,0	1/1:1,10:11:21.06:251,21,0	1/1:2,7:9:15.05:179,15,0	1/1:3,10:13:27.08:321,27,0	1/1:1,22:23:66.14:758,66,0	1/1:7,7:14:18.02:183,18,0	1/1:1,26:27:69:741,69,0	1/1:2,24:26:51.16:607,51,0	1/1:4,16:20:33.09:391,33,0	1/1:0,13:13:36.11:430,36,0	1/1:2,25:27:69.17:788,69,0	1/1:2,19:21:51.16:607,51,0	1/1:2,4:6:12.04:143,12,0
chr10	94040863	.	ACGCACGCACGCACG	A	3765.33	PASS	AB=0.569;AC=45;AF=0.938;AN=48;BaseQRankSum=1.647;DP=292;FS=0.000;HRun=0;HaplotypeScore=98.8687;InbreedingCoeff=0.1175;MQ=41.02;MQ0=23;MQRankSum=2.396;QD=14.48;ReadPosRankSum=0.870;VQSLOD=1.3754;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:14:3:25,3,0	1/1:3,0:3:3.01:69,3,0	./.	./.	./.	1/1:9,0:9:18.06:299,18,0	1/1:14,0:11:9.03:157,9,0	0/1:10,7:10:99:188,0,104	1/1:8,0:7:2.98:22,3,0	1/1:8,0:8:19.24:307,19,0	1/1:9,0:7:6:95,6,0	1/1:6,0:5:6.02:98,6,0	1/1:5,0:5:6.02:100,6,0	1/1:6,0:5:6.01:75,6,0	1/1:9,1:10:17.99:248,18,0	1/1:7,0:7:8.98:116,9,0	1/1:9,0:9:11.90:135,12,0	1/1:7,0:5:9:123,9,0	1/1:3,3:3:8.92:95,9,0	./.	1/1:24,0:16:9.03:175,9,0	0/1:0,7:7:0:0,0,0	0/1:0,12:12:0:1,0,0	1/1:20,0:20:12.01:147,12,0	1/1:11,1:10:9.01:145,9,0	1/1:3,0:23:39.89:587,40,0	1/1:12,0:12:21.03:305,21,0	1/1:8,0:6:15.05:252,15,0
chr10	94040899	.	ACG	A	3553.71	PASS	AB=0.969;AC=54;AF=0.964;AN=56;BaseQRankSum=0.391;DP=358;FS=2.625;HRun=0;HaplotypeScore=103.8230;InbreedingCoeff=-0.0112;MQ=55.37;MQ0=20;MQRankSum=0.701;QD=9.93;ReadPosRankSum=-0.780;VQSLOD=3.3822;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:17:11.43:90,11,0	1/1:5,0:5:8.83:64,9,0	0/1:14,0:8:18.66:19,0,98	0/1:21,0:9:10.32:10,0,109	1/1:13,0:13:19.30:175,19,0	1/1:10,0:10:9.07:73,9,0	1/1:15,0:12:20.96:169,21,0	1/1:12,13:19:11.45:294,11,0	1/1:18,0:16:30.40:251,30,0	1/1:17,0:15:35.13:299,35,0	1/1:7,0:5:7.67:60,8,0	1/1:13,0:12:22.78:180,23,0	1/1:9,0:8:10.50:95,10,0	1/1:12,0:11:25.20:200,25,0	1/1:9,0:9:17.95:146,18,0	1/1:7,0:7:17.96:146,18,0	1/1:5,0:4:11.20:79,11,0	1/1:7,0:7:10.01:54,10,0	1/1:8,0:8:12.48:111,12,0	1/1:6,0:6:11.98:104,12,0	1/1:27,0:21:16.34:120,16,0	1/1:14,0:14:14.15:157,14,0	1/1:6,0:6:2.99:24,3,0	1/1:13,0:13:11.97:97,12,0	1/1:14,0:12:25.42:191,25,0	1/1:24,0:22:9.53:92,10,0	1/1:10,0:10:19.89:170,20,0	1/1:10,0:9:11.01:86,11,0
chr10	94041505	.	GTGAGC	G	25018.47	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.076;DP=502;FS=27.962;HRun=0;HaplotypeScore=161.1960;InbreedingCoeff=0.9668;MQ=65.36;MQ0=0;MQRankSum=-7.895;QD=52.56;ReadPosRankSum=6.338;VQSLOD=3.1634;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:28:45.15:976,45,0	1/1:1,7:8:21.07:455,21,0	0/0:5,0:5:12.01:0,12,231	0/0:21,0:21:53.16:0,53,1144	1/1:2,21:23:54.19:1171,54,0	1/1:1,16:17:39.13:846,39,0	1/1:3,18:21:45.15:976,45,0	1/1:4,31:35:93.27:1871,93,0	1/1:0,20:20:60.21:1301,60,0	1/1:3,25:28:78.24:1603,78,0	1/1:0,24:24:60.21:1300,60,0	1/1:1,13:14:36.12:781,36,0	1/1:3,14:17:45.15:975,45,0	1/1:0,17:17:48.16:1041,48,0	1/1:1,18:19:54.19:1171,54,0	1/1:0,14:14:36.12:781,36,0	1/1:1,11:12:30.10:651,30,0	1/1:0,6:6:18.06:391,18,0	1/1:1,15:16:45.14:934,45,0	1/1:3,19:22:57.20:1235,57,0	1/1:4,12:16:21.05:455,21,0	1/1:1,19:20:51.18:1102,51,0	1/1:1,16:17:42.14:910,42,0	1/1:1,15:16:30.10:650,30,0	1/1:2,19:21:54.19:1171,54,0	1/1:3,12:15:36.12:781,36,0	1/1:5,19:24:54.19:1168,54,0	1/1:0,6:6:15.05:325,15,0
chr10	94041963	.	T	TTTGTAAAA	53318	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.350;DP=568;FS=0.000;HRun=0;HaplotypeScore=128.8075;InbreedingCoeff=0.9246;MQ=81.03;MQ0=0;MQRankSum=-10.708;QD=102.93;ReadPosRankSum=4.079;VQSLOD=5.9411;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,23:42:90.27:3747,90,0	1/1:3,3:6:18.06:778,18,0	0/0:18,0:18:45.13:0,45,1176	0/0:32,0:32:81.28:0,81,2060	1/1:4,15:21:60.17:2256,60,0	1/1:2,12:16:36.12:1580,36,0	1/1:8,14:22:60.21:2533,60,0	1/1:16,8:27:81.26:3078,81,0	1/1:5,25:31:84.29:3560,84,0	1/1:7,15:23:63.22:2524,63,0	1/1:6,24:32:75.26:3143,75,0	1/1:4,9:13:33.11:1291,33,0	1/1:3,8:13:33.11:1404,33,0	1/1:4,8:14:30.10:1316,30,0	1/1:3,13:16:45.15:1903,45,0	1/1:6,14:19:57.20:2400,57,0	1/1:6,11:20:33.11:1329,33,0	1/1:1,2:4:9.03:366,9,0	1/1:12,11:25:66.22:2451,66,0	1/1:12,18:31:81.28:3185,81,0	1/1:9,8:18:42.14:1804,42,0	1/1:9,15:25:63.22:2557,63,0	1/1:10,13:25:51.17:2236,51,0	1/1:1,7:8:9.03:394,9,0	1/1:3,11:14:42.14:1807,42,0	1/1:4,13:19:51.17:2063,51,0	1/1:11,17:29:78.27:3087,78,0	1/1:0,4:4:12.04:527,12,0
chr10	94042196	.	TTGAAGTACACGGAA	T	28224.76	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=9.126;DP=521;FS=1.319;HRun=0;HaplotypeScore=280.9903;InbreedingCoeff=0.9210;MQ=86.08;MQ0=0;MQRankSum=-10.132;QD=59.67;ReadPosRankSum=6.374;VQSLOD=4.1180;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,27:35:66.19:2273,66,0	1/1:0,3:3:9.03:365,9,0	0/0:19,0:19:48.16:0,48,2900	0/0:29,0:29:72.22:0,72,3891	1/1:5,7:12:15.05:507,15,0	1/1:2,9:11:18.06:688,18,0	1/1:12,9:21:27.09:965,27,0	1/1:7,15:22:45.09:1436,45,0	1/1:7,12:19:33.11:1295,33,0	1/1:10,15:25:42.11:1434,42,0	1/1:5,15:20:39.05:1096,39,0	1/1:4,11:15:27.09:1065,27,0	1/1:5,9:14:24.08:943,24,0	1/1:6,13:19:29.92:1129,30,0	1/1:3,15:18:36.12:1417,36,0	1/1:0,16:16:45.15:1786,45,0	1/1:5,11:16:27.09:1042,27,0	1/1:8,6:14:12.02:487,12,0	1/1:15,5:20:15.04:513,15,0	1/1:7,17:24:45.07:1404,45,0	1/1:11,9:20:21.06:546,21,0	1/1:7,21:28:54.10:1572,54,0	1/1:4,13:17:30.10:999,30,0	1/1:7,13:20:27.93:1111,28,0	1/1:6,11:17:33.11:1290,33,0	1/1:7,14:21:42.14:1588,42,0	1/1:5,11:16:15.05:544,15,0	1/1:4,6:10:18.06:730,18,0
chr10	94043337	.	CAT	C	682.13	PASS	AB=0.782;AC=18;AF=0.375;AN=48;BaseQRankSum=5.088;DP=174;FS=49.811;HRun=0;HaplotypeScore=32.7412;InbreedingCoeff=-0.2406;MQ=61.02;MQ0=19;MQRankSum=0.599;QD=5.64;ReadPosRankSum=1.262;VQSLOD=0.8793;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:5:37.88:38,0,110	0/0:2,0:2:5.93:0,6,77	0/0:26,0:15:42.14:0,42,843	0/1:27,0:17:8.70:9,0,750	./.	./.	0/0:3,0:2:6.02:0,6,122	0/0:2,0:2:6.02:0,6,103	0/1:5,1:6:6.90:7,0,167	0/0:1,0:1:3.01:0,3,61	1/1:0,1:1:3.01:34,3,0	0/1:1,1:2:25.71:26,0,55	0/1:5,2:7:62.44:62,0,174	0/1:8,4:12:54.54:55,0,282	0/0:2,1:3:6.02:0,6,111	0/1:6,1:7:45.50:45,0,242	0/1:6,4:10:99:111,0,219	0/0:4,0:4:9.03:0,9,182	1/1:4,0:1:1.25:3,1,0	0/1:1,0:2:0.04:29,0,0	0/0:4,0:3:2.27:0,2,59	1/1:4,0:1:3:27,3,0	./.	0/1:11,3:14:91.41:91,0,393	./.	0/0:4,0:1:3.01:0,3,61	0/1:5,8:13:99:207,0,161	0/1:2,2:4:48.90:73,0,49
chr10	94043652	.	C	CT	17220.83	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=7.376;DP=515;FS=0.611;HRun=2;HaplotypeScore=155.7974;InbreedingCoeff=0.9742;MQ=87.16;MQ0=0;MQRankSum=-10.455;QD=36.88;ReadPosRankSum=5.085;VQSLOD=4.1723;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:32:81.18:1093,81,0	1/1:4,4:8:15.01:188,15,0	0/0:22,0:22:54.15:0,54,656	0/0:26,0:26:66.21:0,66,811	1/1:2,20:22:60.16:818,60,0	1/1:0,10:10:30.10:422,30,0	1/1:2,9:11:27.09:380,27,0	1/1:3,18:21:63.16:846,63,0	1/1:3,17:20:54.14:740,54,0	1/1:2,19:21:57.19:795,57,0	1/1:1,18:19:51.17:717,51,0	1/1:1,11:12:33.11:453,33,0	1/1:3,15:18:54.07:699,54,0	1/1:4,16:20:51.17:703,51,0	1/1:1,20:21:57.19:803,57,0	1/1:2,11:13:36.12:506,36,0	1/1:0,23:23:66.22:926,66,0	1/1:1,14:15:36.09:479,36,0	1/1:6,19:25:60.17:817,60,0	1/1:3,17:20:54.18:758,54,0	1/1:1,9:10:24.04:316,24,0	1/1:3,16:19:57.13:746,57,0	1/1:1,11:12:33.10:447,33,0	1/1:1,14:15:36.12:505,36,0	1/1:0,22:22:63.21:880,63,0	1/1:8,17:25:66.21:896,66,0	1/1:4,25:29:81.24:1117,81,0	1/1:0,4:4:12.04:169,12,0
chr10	94043654	.	TC	T	3473.86	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=8.738;DP=496;FS=2.684;HRun=1;HaplotypeScore=199.2587;InbreedingCoeff=0.9333;MQ=86.73;MQ0=0;MQRankSum=-8.878;QD=7.72;ReadPosRankSum=5.658;VQSLOD=1.2209;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:50.48:190,50,0	1/1:6,0:6:11.23:52,11,0	0/0:19,0:19:57.19:0,57,907	0/0:27,0:27:67.89:0,68,1080	1/1:22,0:22:38.75:131,39,0	1/1:10,0:10:20.67:71,21,0	1/1:10,0:10:22.34:88,22,0	1/1:21,0:21:52.16:256,52,0	1/1:19,0:19:39.89:161,40,0	1/1:20,0:20:45.08:163,45,0	1/1:19,0:19:32.49:110,32,0	1/1:11,0:11:18.11:74,18,0	1/1:18,0:18:26.66:123,27,0	1/1:19,0:19:33.25:147,33,0	1/1:21,0:21:43.40:164,43,0	1/1:12,0:12:28.63:111,29,0	1/1:23,0:23:49.10:170,49,0	1/1:14,0:14:30.59:129,31,0	1/1:20,1:21:47.56:204,48,0	1/1:19,0:19:40.53:149,41,0	1/1:10,0:10:11.15:41,11,0	1/1:19,0:19:34.82:130,35,0	1/1:12,0:12:21.37:71,21,0	1/1:14,1:15:26.36:99,26,0	1/1:22,0:22:48.68:182,49,0	1/1:22,2:24:48.10:201,48,0	1/1:28,0:28:59.15:212,59,0	1/1:4,0:4:10.83:46,11,0
chr10	94043691	.	CG	C	13296.16	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=9.914;DP=499;FS=1.706;HRun=1;HaplotypeScore=196.6817;InbreedingCoeff=0.9771;MQ=88.87;MQ0=0;MQRankSum=-11.472;QD=30.22;ReadPosRankSum=7.757;VQSLOD=4.0476;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:27:56.70:662,57,0	1/1:0,5:5:15.04:173,15,0	0/0:30,0:30:90.27:0,90,1329	0/0:29,0:29:78.26:0,78,1222	1/1:2,22:24:49.11:583,49,0	1/1:0,11:11:33.10:397,33,0	1/1:0,18:18:51.15:607,51,0	1/1:3,20:23:61.12:716,61,0	1/1:0,16:16:48.15:578,48,0	1/1:1,25:26:72.22:858,72,0	1/1:1,15:16:43.01:485,43,0	1/1:1,10:11:29.01:355,29,0	1/1:0,19:19:57.17:686,57,0	1/1:3,20:23:62.53:742,63,0	1/1:0,17:17:48.15:574,48,0	1/1:1,9:10:26:315,26,0	1/1:6,20:26:54.60:621,55,0	1/1:0,14:14:39.12:462,39,0	1/1:2,17:19:45.61:532,46,0	1/1:0,17:17:47.01:565,47,0	1/1:1,10:11:21.02:237,21,0	1/1:0,16:16:44:524,44,0	1/1:0,13:13:22.37:301,22,0	1/1:0,10:10:21.02:230,21,0	1/1:3,15:18:39.14:445,39,0	1/1:1,17:18:51.62:604,52,0	1/1:2,25:27:76.07:869,76,0	1/1:0,5:5:15.04:176,15,0
chr10	94044780	.	GT	G	269.81	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.552;DP=530;FS=3.083;HRun=10;HaplotypeScore=81.3712;InbreedingCoeff=0.9563;MQ=78.09;MQ0=0;MQRankSum=-1.740;QD=12.85;ReadPosRankSum=0.952;VQSLOD=3.7943;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:21:41.98:365,42,0	0/0:8,0:8:21.04:0,21,220	0/0:17,0:17:36.05:0,36,358	0/0:11,0:11:13.58:0,14,135	0/0:37,1:38:73.19:0,73,1026	0/0:16,0:16:39.09:0,39,423	0/0:11,0:11:27.05:0,27,289	0/0:26,1:27:49.12:0,49,754	0/0:15,0:15:39.04:0,39,399	0/0:24,0:24:54.13:0,54,586	0/0:23,1:24:43.12:0,43,697	0/0:18,0:18:51.11:0,51,547	0/0:8,0:8:24.06:0,24,265	0/0:15,0:15:42.11:0,42,458	0/0:14,0:14:39.09:0,39,417	0/0:16,0:16:42.11:0,42,457	0/0:5,0:22:42.80:0,43,224	0/0:23,1:24:37.03:0,37,602	0/0:25,0:26:59.97:0,60,633	0/0:27,0:27:75.20:0,75,826	0/0:22,0:22:54.13:0,54,583	0/0:21,0:21:60.15:0,60,656	0/0:19,0:19:48.13:0,48,528	0/0:12,0:12:36.09:0,36,390	0/0:17,0:17:48.12:0,48,524	0/0:22,1:24:33.92:0,34,572	0/0:26,0:26:72.19:0,72,796	0/0:7,0:7:15.04:0,15,166
chr10	94044917	.	A	AT	13448.01	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-5.997;DP=490;FS=2.135;HRun=8;HaplotypeScore=47.0485;InbreedingCoeff=0.7386;MQ=78.71;MQ0=0;MQRankSum=-6.302;QD=28.08;ReadPosRankSum=2.310;VQSLOD=5.2545;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:19:54.11:605,54,0	1/1:2,7:9:21.01:226,21,0	0/0:11,0:11:20.49:0,20,173	0/1:13,0:13:3.49:3,0,142	1/1:1,18:19:54.16:617,54,0	1/1:3,15:18:45.13:519,45,0	1/1:1,11:12:27.08:312,27,0	1/1:6,22:28:69.19:785,69,0	1/1:0,13:13:39.12:450,39,0	1/1:3,13:16:39.12:450,39,0	1/1:3,23:27:41.57:714,42,0	1/1:1,11:12:33.10:381,33,0	1/1:1,14:15:42.12:485,42,0	1/1:2,8:10:24.50:257,25,0	1/1:2,16:18:39.12:450,39,0	1/1:2,8:10:24.07:277,24,0	1/1:3,1:22:60.15:354,60,0	1/1:1,13:14:36.11:415,36,0	1/1:3,28:31:62.80:973,63,0	1/1:1,33:35:99:1157,102,0	1/1:1,3:4:9.03:104,9,0	1/1:4,14:18:42.12:485,42,0	1/1:5,17:22:51.15:588,51,0	1/1:0,12:12:36.11:415,36,0	1/1:2,14:16:36.11:415,36,0	1/1:1,23:24:69.21:796,69,0	1/1:3,32:34:87.26:1004,87,0	1/1:0,6:6:18.05:208,18,0
chr10	94045634	.	TATTG	T	2462.23	PASS	AB=0.987;AC=38;AF=0.731;AN=52;BaseQRankSum=-6.168;DP=225;FS=29.740;HRun=0;HaplotypeScore=45.0116;InbreedingCoeff=-0.0298;MQ=89.46;MQ0=1;MQRankSum=-0.777;QD=15.89;ReadPosRankSum=2.621;VQSLOD=1.1818;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,2:23:8.33:70,8,0	0/1:2,0:2:17.04:27,0,17	0/0:23,0:11:20:0,20,253	0/0:43,0:15:28.94:0,29,309	1/1:6,0:6:8.99:109,9,0	0/1:4,0:4:7.26:82,0,7	1/1:2,0:2:6.02:92,6,0	0/1:26,0:23:99:395,0,198	0/1:3,0:3:23.49:38,0,23	1/1:7,0:7:15.94:223,16,0	1/1:2,0:2:3.01:46,3,0	1/1:2,0:2:6.01:71,6,0	./.	1/1:3,0:3:6.01:71,6,0	0/1:12,0:12:44.23:186,0,44	0/1:5,0:5:11.09:126,0,11	0/1:11,0:11:75.94:175,0,76	0/1:11,2:13:57.12:104,0,57	1/1:3,0:3:6.02:94,6,0	1/1:5,0:5:9.03:135,9,0	1/1:4,0:4:5.80:91,6,0	1/1:3,0:3:9.02:117,9,0	0/1:4,0:4:0:0,0,0	1/1:2,0:2:3.01:45,3,0	0/1:5,0:5:11.52:60,0,12	1/1:2,0:2:6.02:95,6,0	1/1:6,0:6:12.03:161,12,0	./.
chr10	94045636	.	TTG	T	3575.91	PASS	AB=0.500;AC=47;AF=0.904;AN=52;BaseQRankSum=-5.227;DP=214;FS=6.232;HRun=0;HaplotypeScore=37.0331;InbreedingCoeff=0.4988;MQ=92.05;MQ0=1;MQRankSum=-2.947;QD=25.36;ReadPosRankSum=1.130;VQSLOD=3.5362;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:21.05:316,21,0	1/1:2,0:2:4.20:23,4,0	0/0:25,1:11:19.53:0,20,248	0/0:45,1:17:27.90:0,28,232	1/1:4,1:5:9.03:133,9,0	1/1:4,0:4:9.02:116,9,0	1/1:2,0:2:6.02:92,6,0	1/1:22,3:24:50:631,50,0	1/1:3,0:3:5.16:68,5,0	1/1:0,6:6:18.06:270,18,0	1/1:1,0:1:3.01:46,3,0	1/1:2,0:2:6.01:71,6,0	./.	1/1:2,0:2:6.01:71,6,0	1/1:8,1:9:21.79:268,22,0	1/1:4,0:4:10.85:143,11,0	1/1:10,0:10:11.80:204,12,0	1/1:5,8:13:16.25:198,16,0	1/1:2,0:2:6.02:94,6,0	1/1:3,0:3:9.03:135,9,0	1/1:3,0:3:5.80:91,6,0	1/1:3,0:3:9.02:117,9,0	0/1:0,4:4:0:0,0,0	1/1:1,0:1:3.01:45,3,0	1/1:5,0:5:10.59:144,11,0	1/1:3,0:3:9.03:139,9,0	1/1:4,0:4:12.03:161,12,0	./.
chr10	94046959	.	G	GCACACA	2084.22	PASS	AB=0.881;AC=33;AF=0.635;AN=52;BaseQRankSum=-2.219;DP=366;FS=8.053;HRun=0;HaplotypeScore=127.5826;InbreedingCoeff=0.5995;MQ=43.21;MQ0=16;MQRankSum=-0.470;QD=8.44;ReadPosRankSum=-0.486;VQSLOD=1.8002;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:6:0:0,0,0	1/1:6,0:6:3.01:53,3,0	./.	./.	1/1:12,0:12:3.36:25,3,0	0/0:8,0:10:9.02:0,9,122	0/0:9,0:11:12.47:0,12,163	1/1:15,0:13:14.37:113,14,0	1/1:19,0:17:11.11:107,11,0	1/1:22,0:20:25.43:385,25,0	1/1:13,0:13:8.98:72,9,0	0/0:5,0:8:0.47:0,0,1	0/0:17,0:20:24.84:0,25,400	0/0:8,0:8:9.01:0,9,109	1/1:15,0:15:8.98:72,9,0	1/1:8,0:7:4.20:24,4,0	0/1:12,10:25:3.51:91,0,4	1/1:13,0:12:12.24:197,12,0	1/1:11,0:11:5.81:56,6,0	0/1:12,0:11:0:0,0,0	1/1:29,0:27:11.49:208,11,0	0/0:6,0:6:3.01:0,3,61	0/0:6,0:5:0:0,0,0	0/0:15,0:15:17.99:0,18,303	1/1:7,0:7:0.47:1,0,0	1/1:16,0:16:22.30:438,22,0	1/1:13,0:12:14.17:245,14,0	1/1:3,0:2:6.02:154,6,0
chr10	94050382	.	C	CT	3037.47	PASS	AB=0.883;AC=40;AF=0.952;AN=42;BaseQRankSum=0.236;DP=182;FS=49.010;HRun=2;HaplotypeScore=61.8695;InbreedingCoeff=-0.1259;MQ=84.53;MQ0=11;MQRankSum=-4.441;QD=17.16;ReadPosRankSum=3.417;VQSLOD=0.9113;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:8.98:87,9,0	./.	0/1:29,4:19:99:134,0,209	0/1:36,6:19:94.59:199,0,95	1/1:0,2:2:5.97:50,6,0	1/1:3,6:8:15.04:172,15,0	1/1:0,1:1:3.01:32,3,0	./.	1/1:0,5:5:15.04:175,15,0	1/1:2,6:7:15.05:195,15,0	./.	1/1:0,2:2:5.99:56,6,0	1/1:1,1:2:3.01:34,3,0	1/1:1,3:4:9.02:100,9,0	1/1:0,8:8:24.07:273,24,0	1/1:0,7:7:18.05:206,18,0	./.	1/1:2,2:4:6:60,6,0	1/1:1,5:4:12.04:162,12,0	./.	./.	1/1:1,1:2:3.01:34,3,0	1/1:0,2:2:3.01:31,3,0	1/1:1,1:1:3.01:31,3,0	./.	1/1:0,11:8:24.08:308,24,0	1/1:0,20:18:54.16:641,54,0	1/1:0,4:4:12.04:152,12,0
chr10	94050387	.	AC	A	2830.99	PASS	AB=0.867;AC=40;AF=0.952;AN=42;BaseQRankSum=1.772;DP=175;FS=59.499;HRun=2;HaplotypeScore=60.1346;InbreedingCoeff=-0.1225;MQ=77.05;MQ0=9;MQRankSum=-2.765;QD=16.56;ReadPosRankSum=4.517;VQSLOD=0.3416;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:6.01:58,6,0	./.	0/1:26,5:19:66.08:66,0,348	0/1:35,6:15:88.78:181,0,89	1/1:1,1:2:3:26,3,0	1/1:0,10:9:24.06:268,24,0	1/1:0,1:1:3:28,3,0	./.	1/1:0,5:5:15.03:154,15,0	1/1:0,6:5:15.04:169,15,0	./.	1/1:0,2:2:5.95:48,6,0	1/1:0,2:2:6.02:69,6,0	1/1:0,4:4:9.01:87,9,0	1/1:0,8:8:24.05:240,24,0	1/1:0,7:7:18.04:181,18,0	./.	1/1:1,3:4:9.03:111,9,0	1/1:0,6:5:15.05:183,15,0	./.	./.	1/1:0,1:1:3.01:30,3,0	1/1:0,2:2:3:26,3,0	1/1:0,1:1:3:26,3,0	./.	1/1:0,11:8:24.07:274,24,0	1/1:0,20:18:54.11:565,54,0	1/1:0,4:4:12.03:135,12,0
chr10	94050439	.	G	GT	3512.50	PASS	AC=32;AF=1.000;AN=32;DP=193;FS=0.000;HRun=1;HaplotypeScore=29.7081;InbreedingCoeff=-0.0387;MQ=20.94;MQ0=45;QD=31.08;VQSLOD=3.1014;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,8:10:18.06:269,18,0	./.	./.	./.	./.	1/1:1,8:7:21.07:314,21,0	./.	1/1:3,3:4:9.03:135,9,0	1/1:3,5:6:15.05:224,15,0	1/1:3,1:1:3.01:45,3,0	./.	1/1:1,7:7:21.07:314,21,0	1/1:0,5:5:15.05:224,15,0	1/1:0,5:5:9.03:135,9,0	1/1:1,9:10:24.08:358,24,0	1/1:2,4:6:12.04:179,12,0	1/1:1,2:2:6.02:90,6,0	1/1:0,4:4:12.04:180,12,0	1/1:1,8:7:21.07:314,21,0	./.	./.	./.	./.	1/1:1,1:2:6.02:89,6,0	./.	1/1:3,8:6:18.02:244,18,0	1/1:3,10:12:27.09:399,27,0	./.
chr10	94051434	.	C	CTT	708.32	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.077;DP=492;FS=8.816;HRun=10;HaplotypeScore=65.7257;InbreedingCoeff=0.7298;MQ=66.96;MQ0=6;MQRankSum=-0.413;QD=19.14;ReadPosRankSum=1.204;VQSLOD=1.9214;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,31:36:32.14:803,32,0	0/0:7,0:7:18.04:0,18,183	0/0:20,0:14:11.94:0,12,118	0/0:25,0:15:5.50:0,6,165	0/0:20,0:19:36.04:0,36,366	0/0:23,0:23:57.08:0,57,571	0/0:11,0:11:17.98:0,18,183	0/0:27,0:26:60.12:0,60,610	0/0:12,0:12:20.99:0,21,206	0/0:24,0:24:51.04:0,51,514	0/0:21,0:20:57.12:0,57,580	0/0:8,0:8:12.01:0,12,122	0/0:13,0:14:20.77:0,21,195	0/0:12,0:12:21.03:0,21,206	0/0:15,0:15:29.74:0,30,273	0/0:6,0:6:8.99:0,9,91	0/0:26,0:26:56.84:0,57,561	0/0:6,0:6:9.02:0,9,92	0/0:16,0:16:20.46:0,20,247	0/0:25,0:25:56.97:0,57,563	0/0:15,0:16:29.75:0,30,348	0/0:24,0:25:47.79:0,48,462	0/0:22,0:22:50.95:0,51,491	0/0:16,0:16:39.06:0,39,389	0/0:17,0:17:27:0,27,275	0/0:17,0:18:38.79:0,39,372	0/0:13,0:14:30.04:0,30,305	0/0:6,0:6:12.01:0,12,122
chr10	94051933	.	GT	G	570.74	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.021;DP=459;FS=1.992;HRun=4;HaplotypeScore=38.6763;InbreedingCoeff=0.7486;MQ=55.26;MQ0=17;MQRankSum=1.357;QD=21.95;ReadPosRankSum=1.544;VQSLOD=2.5619;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:57.11:665,57,0	0/0:6,0:6:15.01:0,15,188	0/0:17,0:7:15.03:0,15,181	0/0:5,0:2:3:0,3,26	0/0:30,0:29:63.20:0,63,867	0/0:16,0:15:36.12:0,36,503	0/0:12,0:11:24.08:0,24,336	0/0:25,0:17:39.11:0,39,501	0/0:19,0:19:45.15:0,45,629	0/0:19,0:18:51.17:0,51,701	0/0:22,0:22:54.18:0,54,755	0/0:12,0:12:24.04:0,24,314	0/0:14,0:14:27.05:0,27,356	0/0:10,0:9:21.05:0,21,275	0/0:24,0:24:51.17:0,51,713	0/0:10,0:10:15.04:0,15,193	0/0:18,0:17:45.14:0,45,612	0/0:4,0:4:12.04:0,12,168	0/0:20,0:18:51.15:0,51,681	0/0:26,0:26:69.06:0,69,908	0/0:7,0:7:12.03:0,12,151	0/0:18,0:17:36.12:0,36,504	0/0:23,0:23:41.66:0,42,588	0/0:6,0:6:12.04:0,12,168	0/0:13,0:13:21.07:0,21,287	0/0:19,0:18:54.15:0,54,736	0/0:27,0:25:57.16:0,57,778	0/0:11,0:8:24.08:0,24,326
chr10	94053072	.	G	GT	2796.62	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-10.344;DP=544;FS=2.075;HRun=7;HaplotypeScore=50.8321;InbreedingCoeff=0.9899;MQ=55.71;MQ0=4;MQRankSum=4.037;QD=18.90;ReadPosRankSum=-0.348;VQSLOD=3.0944;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:10:30.05:0,30,290	0/0:11,0:11:30.01:0,30,282	0/0:15,0:13:30.03:0,30,281	0/0:15,1:11:23.88:0,24,205	0/0:34,0:34:98.94:0,99,912	1/1:3,18:20:36.11:435,36,0	1/1:2,10:10:12.04:145,12,0	0/0:28,0:28:72.05:0,72,676	0/0:23,0:23:66.09:0,66,631	0/0:31,0:30:90.15:0,90,869	0/0:20,0:20:57.07:0,57,545	1/1:1,16:17:24.07:290,24,0	1/1:2,13:15:23.93:287,24,0	1/1:0,23:23:33.10:399,33,0	0/0:20,0:20:57.09:0,57,550	0/0:17,0:17:48.02:0,48,450	0/0:21,0:21:57.04:0,57,540	0/0:9,0:8:15.02:0,15,145	0/0:17,0:17:45.07:0,45,435	0/0:26,0:26:78.13:0,78,753	0/0:14,0:14:33.02:0,33,311	1/1:3,26:29:57.17:687,57,0	1/1:0,14:14:33.10:398,33,0	1/1:0,17:16:30.09:362,30,0	0/0:13,0:13:39.01:0,39,366	0/0:27,0:26:75.10:0,75,716	0/0:31,0:29:78.09:0,78,742	0/0:10,0:9:21.03:0,21,203
chr10	94053185	.	GC	G	218.70	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=3.164;DP=643;FS=11.672;HRun=2;HaplotypeScore=55.7948;InbreedingCoeff=0.8009;MQ=51.33;MQ0=60;MQRankSum=1.808;QD=12.86;ReadPosRankSum=1.484;VQSLOD=1.1409;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:14:27.09:0,27,403	0/0:10,0:10:27.09:0,27,405	./.	0/0:25,0:1:3.01:0,3,45	0/0:25,0:25:51.17:0,51,763	0/0:26,0:25:63.17:0,63,919	0/0:12,0:12:21.05:0,21,294	0/0:33,0:16:48.16:0,48,700	0/0:27,0:27:66.18:0,66,964	0/0:30,0:29:87.29:0,87,1285	0/0:16,0:15:33.11:0,33,494	0/0:25,0:25:54.17:0,54,782	0/0:26,0:26:59.86:0,60,873	0/0:31,0:31:75.24:0,75,1104	0/0:21,0:21:54.18:0,54,801	0/0:20,0:20:57.19:0,57,854	1/1:0,17:16:24.08:312,24,0	0/0:4,0:3:9.03:0,9,135	0/0:19,0:13:39.13:0,39,584	0/0:34,0:33:72.23:0,72,1056	0/0:34,0:33:23.66:0,24,339	0/0:31,0:29:78.25:0,78,1149	0/0:23,0:22:36.12:0,36,540	0/0:14,0:14:27.08:0,27,383	0/0:12,0:12:36.07:0,36,513	0/0:29,0:29:84.28:0,84,1259	0/0:41,0:41:99:0,111,1660	0/0:18,0:18:48.16:0,48,719
chr10	94054071	.	A	ACT	292.11	PASS	AB=0.950;AC=7;AF=0.175;AN=40;BaseQRankSum=-3.107;DP=364;FS=0.000;HRun=0;HaplotypeScore=32.5950;InbreedingCoeff=0.4757;MQ=20.16;MQ0=195;MQRankSum=-2.225;QD=7.30;ReadPosRankSum=0.301;VQSLOD=2.7529;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:6:34.41:34,0,36	0/0:3,0:3:9.03:0,9,125	./.	./.	0/0:19,0:9:3.01:0,3,42	1/1:2,5:4:3.01:54,3,0	./.	0/0:10,0:5:15.04:0,15,192	0/0:13,0:6:9.03:0,9,125	0/0:38,0:16:42.09:0,42,563	0/0:20,0:11:18.06:0,18,250	./.	./.	./.	0/0:14,0:9:9.03:0,9,125	0/0:18,0:12:20.99:0,21,292	0/0:23,0:4:6.02:0,6,83	0/0:13,0:2:3.01:0,3,42	0/0:11,0:1:3.01:0,3,42	0/0:12,0:8:24.08:0,24,333	./.	1/1:0,3:4:9.03:161,9,0	1/1:4,6:6:9.03:161,9,0	./.	0/0:20,0:14:36.12:0,36,500	0/0:17,0:7:21.07:0,21,291	0/0:12,0:5:6:0,6,83	0/0:23,0:8:9.03:0,9,125
chr10	94055651	.	CG	C	745.99	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.515;DP=631;FS=5.336;HRun=2;HaplotypeScore=70.7101;InbreedingCoeff=0.9912;MQ=58.27;MQ0=12;MQRankSum=2.045;QD=21.31;ReadPosRankSum=2.213;VQSLOD=3.5199;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:34:53.89:841,54,0	0/0:14,0:14:39.13:0,39,583	0/0:36,0:14:22.89:0,23,448	0/0:36,0:16:32.35:0,32,412	0/0:26,0:26:57.12:0,57,809	0/0:22,0:22:54.18:0,54,803	0/0:23,0:22:51.10:0,51,713	0/0:21,0:19:57.12:0,57,770	0/0:14,0:14:27.09:0,27,402	0/0:28,0:26:72.24:0,72,1076	0/0:28,0:28:66.22:0,66,987	0/0:15,0:14:39.09:0,39,554	0/0:14,0:13:24.08:0,24,358	0/0:17,0:16:39.09:0,39,556	0/0:17,0:17:39.13:0,39,583	0/0:19,0:19:45.15:0,45,670	0/0:23,0:23:48.12:0,48,670	0/0:25,0:25:48.14:0,48,688	0/0:23,0:19:57.17:0,57,803	0/0:35,0:35:99:0,102,1502	0/0:15,0:15:38.91:0,39,560	0/0:25,0:24:54.18:0,54,807	0/0:21,0:19:48.16:0,48,718	0/0:17,0:17:30.10:0,30,448	0/0:22,0:22:54.18:0,54,808	0/0:22,0:21:60.20:0,60,898	0/0:25,0:25:69.15:0,69,977	0/0:13,0:13:24.08:0,24,352
chr10	94055827	.	T	TGA	13869.65	PASS	AB=0.600;AC=49;AF=0.907;AN=54;BaseQRankSum=-1.109;DP=393;FS=0.000;HRun=0;HaplotypeScore=51.8827;InbreedingCoeff=0.7058;MQ=28.70;MQ0=24;MQRankSum=-2.230;QD=43.75;ReadPosRankSum=3.755;VQSLOD=6.1611;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,7:8:21.07:418,21,0	1/1:2,8:9:24.08:486,24,0	0/0:40,0:9:27.08:0,27,406	0/0:35,0:11:30.10:0,30,489	1/1:2,17:16:42.14:839,42,0	1/1:2,15:16:42.14:851,42,0	1/1:0,4:4:12.04:243,12,0	0/1:2,4:2:35.22:55,0,35	1/1:2,17:17:48.16:971,48,0	1/1:3,20:16:45.15:908,45,0	1/1:0,14:11:24.08:484,24,0	1/1:1,11:10:23.87:486,24,0	1/1:2,7:9:24.08:485,24,0	1/1:1,12:12:33.11:668,33,0	1/1:1,20:16:39.13:780,39,0	1/1:0,18:17:48.16:972,48,0	1/1:2,4:6:9.03:173,9,0	1/1:1,8:7:12.04:243,12,0	1/1:2,10:9:24.08:487,24,0	1/1:1,15:16:45.15:911,45,0	./.	1/1:1,10:11:30.10:581,30,0	1/1:0,4:4:9.03:182,9,0	1/1:1,4:5:12.04:235,12,0	1/1:1,9:9:27.09:523,27,0	1/1:4,12:13:39.13:745,39,0	1/1:2,10:12:33.11:659,33,0	1/1:3,11:9:24.08:486,24,0
chr10	94056550	.	AC	A	666.97	PASS	AB=1.000;AC=13;AF=0.295;AN=44;BaseQRankSum=0.895;DP=456;FS=3.285;HRun=2;HaplotypeScore=61.9415;InbreedingCoeff=0.7529;MQ=25.90;MQ0=79;MQRankSum=-1.316;QD=6.88;ReadPosRankSum=2.435;VQSLOD=1.1663;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:19:21:0,21,288	0/0:10,0:8:6.02:0,6,90	./.	./.	0/0:17,0:16:21.07:0,21,314	./.	1/1:4,7:2:3.01:39,3,0	./.	0/0:19,0:12:6.02:0,6,89	0/0:25,0:18:51.17:0,51,761	0/0:20,0:17:18.06:0,18,269	1/1:2,14:5:6.02:78,6,0	1/1:2,8:4:3.01:39,3,0	1/1:3,14:7:12.04:156,12,0	0/0:23,0:15:9.03:0,9,135	0/0:24,0:22:15.01:0,15,199	./.	0/1:13,0:9:0:0,0,0	0/0:15,0:5:15.05:0,15,224	0/0:25,0:18:33.07:0,33,468	0/0:8,0:4:3.01:0,3,45	1/1:3,18:13:24.08:311,24,0	1/1:0,9:6:15.05:194,15,0	./.	0/0:27,0:23:21.07:0,21,306	0/0:26,0:17:45.15:0,45,657	0/0:21,0:14:18.06:0,18,268	0/0:16,0:9:21.07:0,21,314
chr10	94057656	.	T	TCTTA	8681.58	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-10.785;DP=564;FS=16.162;HRun=0;HaplotypeScore=94.0739;InbreedingCoeff=0.9978;MQ=77.94;MQ0=3;MQRankSum=-2.667;QD=56.37;ReadPosRankSum=2.842;VQSLOD=5.5863;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.25:0,72,1326	0/0:9,0:9:27.09:0,27,511	0/0:20,0:20:35.69:0,36,878	0/0:17,0:16:30.93:0,31,503	0/0:24,0:24:63.22:0,63,1183	1/1:1,22:23:51.17:1363,51,0	1/1:0,12:13:30.10:796,30,0	0/0:29,0:29:84.17:0,84,1428	0/0:14,0:14:39.13:0,39,717	0/0:29,0:29:81.28:0,81,1520	0/0:15,0:15:42.14:0,42,783	1/1:3,18:20:42.14:1121,42,0	1/1:0,18:20:45.15:1214,45,0	1/1:0,16:17:39.13:1043,39,0	0/0:14,0:14:39.13:0,39,741	0/0:17,0:17:48.16:0,48,895	0/0:28,0:28:78.26:0,78,1395	0/0:11,0:11:17.14:0,17,436	0/0:24,0:24:63.21:0,63,1183	0/0:27,0:27:81.28:0,81,1525	0/0:17,0:17:51.17:0,51,953	1/1:3,18:22:51.17:1274,51,0	1/1:2,18:23:39.13:1014,39,0	1/1:1,12:13:33.11:857,33,0	0/0:24,0:24:72.25:0,72,1332	0/0:24,0:24:63.22:0,63,1183	0/0:29,0:26:84.22:0,84,1436	0/0:12,0:12:32.33:0,32,625
chr10	94062758	.	T	TTCTTAA	14286.29	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=1.122;DP=618;FS=1.563;HRun=0;HaplotypeScore=124.5318;InbreedingCoeff=0.9990;MQ=73.66;MQ0=0;MQRankSum=-17.009;QD=83.55;ReadPosRankSum=-2.122;VQSLOD=5.2714;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.32:0,93,2283	0/0:9,0:9:27.09:0,27,665	0/0:18,0:17:39.17:0,39,1094	0/0:23,0:22:63.21:0,63,1447	0/0:21,0:21:60.18:0,60,1366	1/1:3,18:23:57.20:2044,57,0	1/1:2,16:20:48.16:1653,48,0	0/0:29,0:29:87.29:0,87,2044	0/0:21,0:21:60.17:0,60,1360	0/0:25,0:25:69.23:0,69,1623	0/0:21,0:21:60.21:0,60,1453	1/1:9,18:30:78.23:2628,78,0	1/1:8,15:26:66.23:2293,66,0	1/1:6,15:23:60.21:1999,60,0	0/0:22,0:22:66.23:0,66,1564	0/0:25,0:25:69.24:0,69,1676	0/0:30,0:30:87.30:0,87,2128	0/0:22,0:22:66.20:0,66,1550	0/0:26,0:26:78.25:0,78,1819	0/0:22,0:22:63.20:0,63,1496	0/0:28,0:28:78.27:0,78,1877	1/1:4,13:17:42.14:1338,42,0	1/1:5,16:20:51.17:1745,51,0	1/1:1,9:11:20.82:586,21,0	0/0:13,0:13:36.12:0,36,887	0/0:22,0:22:63.22:0,63,1547	0/0:28,0:28:81.28:0,81,1966	0/0:10,0:10:30.10:0,30,739
chr10	94062937	.	G	GACAC	4862.59	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-9.591;DP=758;FS=6.353;HRun=0;HaplotypeScore=126.0358;InbreedingCoeff=0.9811;MQ=58.06;MQ0=16;MQRankSum=-1.002;QD=26.00;ReadPosRankSum=4.082;VQSLOD=4.3953;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:53:99:0,117,1968	0/0:15,0:15:39.13:0,39,642	0/0:20,0:7:20.50:0,20,224	0/0:20,0:9:14.86:0,15,196	0/0:33,0:32:87.22:0,87,1504	1/1:2,16:20:14.84:317,15,0	1/1:6,16:23:14.84:317,15,0	0/0:20,0:17:36.12:0,36,618	0/0:25,0:24:63.18:0,63,1030	0/0:38,0:34:84.25:0,84,1313	0/0:21,0:21:49.14:0,49,892	1/1:4,17:23:15.05:380,15,0	1/1:2,15:17:20.98:531,21,0	1/1:4,19:25:23.55:489,24,0	0/0:22,0:22:60.21:0,60,1037	0/0:18,0:18:46.82:0,47,772	0/0:44,0:44:99:0,101,1917	0/0:29,0:29:75.23:0,75,1216	0/0:29,0:26:57.13:0,57,852	0/0:28,0:28:75.67:0,76,1185	0/0:71,0:71:99:0,165,2561	1/1:7,18:26:33.11:838,33,0	1/1:2,10:14:11.88:302,12,0	1/1:4,32:38:69.02:1688,69,0	0/0:22,0:22:57.20:0,57,981	0/0:29,0:26:72.21:0,72,1133	0/0:19,0:19:48.15:0,48,806	0/0:12,0:12:21.51:0,22,335
chr10	94063763	.	T	TA	336.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.567;DP=528;FS=0.000;HRun=9;HaplotypeScore=50.2251;InbreedingCoeff=0.9147;MQ=75.48;MQ0=0;MQRankSum=-2.819;QD=19.80;ReadPosRankSum=1.094;VQSLOD=3.7998;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:39.11:431,39,0	0/0:8,0:8:20.98:0,21,179	0/0:18,1:17:31.09:0,31,259	0/0:6,0:6:8.21:0,8,59	0/0:27,0:27:74.88:0,75,636	0/0:31,0:31:86.91:0,87,744	0/0:6,0:6:17.98:0,18,152	0/0:31,0:31:83.95:0,84,722	0/0:19,0:20:50.02:0,50,423	0/0:25,0:25:74.99:0,75,651	0/0:38,0:38:98.97:0,99,859	0/0:8,0:8:23.98:0,24,206	0/0:11,1:12:32.95:0,33,279	0/0:10,0:10:26.99:0,27,234	0/0:19,0:19:50.96:0,51,435	0/0:21,0:21:59.97:0,60,517	0/0:14,0:14:38.97:0,39,334	0/0:14,0:14:38.97:0,39,334	0/0:14,0:14:38.98:0,39,336	0/0:35,0:35:92.96:0,93,805	0/0:7,0:7:17.99:0,18,156	0/0:16,0:16:41.99:0,42,365	0/0:18,0:18:50.99:0,51,443	0/0:12,0:12:32.98:0,33,286	0/0:25,0:25:62.63:0,63,524	0/0:26,0:26:65.98:0,66,573	0/0:17,0:17:50.99:0,51,443	0/0:31,1:32:53.80:0,54,696
chr10	94065682	.	G	GA	3113.40	PASS	AB=0.963;AC=17;AF=0.304;AN=56;BaseQRankSum=-7.788;DP=540;FS=16.368;HRun=9;HaplotypeScore=62.6844;InbreedingCoeff=0.9037;MQ=76.04;MQ0=2;MQRankSum=1.254;QD=18.98;ReadPosRankSum=2.608;VQSLOD=2.6260;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:65.98:0,66,573	0/0:10,0:10:29.99:0,30,260	0/0:30,0:20:13.86:0,14,258	0/1:24,1:18:34.90:37,0,35	0/0:26,0:26:59.16:0,59,502	1/1:2,20:22:39.11:431,39,0	1/1:2,15:16:30.08:332,30,0	0/0:21,0:22:49.99:0,50,416	0/0:19,0:19:50.98:0,51,443	0/0:22,0:22:56.97:0,57,495	0/0:23,0:23:47.17:0,47,394	1/1:2,12:14:33.07:355,33,0	1/1:1,12:13:10.02:326,10,0	1/1:2,13:15:36.10:398,36,0	0/0:21,0:21:59.99:0,60,521	0/0:11,0:11:29.99:0,30,260	0/0:29,0:29:83.97:0,84,725	0/0:18,0:18:44.99:0,45,391	0/0:16,0:16:41.98:0,42,361	0/0:19,0:19:44.98:0,45,390	0/0:18,0:18:38.97:0,39,338	1/1:4,10:15:32.96:347,33,0	1/1:1,21:23:54.15:597,54,0	1/1:3,16:19:45.12:498,45,0	0/0:17,0:17:50.99:0,51,443	0/0:16,0:15:38.99:0,39,338	0/0:22,0:22:53.98:0,54,469	0/0:10,0:10:23.99:0,24,208
chr10	94065791	.	A	AAC	4606.22	PASS	AC=18;AF=0.346;AN=52;BaseQRankSum=0.815;DP=547;FS=0.876;HRun=0;HaplotypeScore=88.1942;InbreedingCoeff=0.9694;MQ=51.17;MQ0=35;MQRankSum=-0.136;QD=26.94;ReadPosRankSum=1.681;VQSLOD=6.0772;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:35:18.66:591,19,0	0/0:9,0:9:21.07:0,21,258	./.	./.	0/0:23,0:22:48.12:0,48,566	1/1:1,17:15:42.14:684,42,0	1/1:12,13:23:21.07:342,21,0	0/0:25,0:17:33.08:0,33,383	0/0:14,0:14:27.07:0,27,322	0/0:24,0:21:48.15:0,48,591	0/0:13,0:13:21.03:0,21,242	1/1:3,14:16:33.11:533,33,0	1/1:0,12:12:33.11:538,33,0	1/1:0,10:9:18.06:293,18,0	0/0:16,0:16:42.09:0,42,490	0/0:19,0:19:39.12:0,39,480	0/0:40,0:40:81.24:0,81,985	0/0:30,0:30:72.23:0,72,886	0/0:13,0:8:15.05:0,15,184	0/0:18,0:19:44.97:0,45,529	0/0:36,0:36:90.23:0,90,1078	1/1:4,10:13:5.69:419,6,0	1/1:3,12:14:33.11:534,33,0	1/1:5,18:23:42.14:672,42,0	0/0:20,0:20:42.13:0,42,516	0/0:16,0:16:39.12:0,39,480	0/0:18,0:18:36.10:0,36,433	0/0:4,0:4:12.04:0,12,148
chr10	94072332	.	TA	T	1092.43	PASS	AB=0.970;AC=17;AF=0.304;AN=56;BaseQRankSum=13.714;DP=506;FS=13.088;HRun=10;HaplotypeScore=67.3656;InbreedingCoeff=0.7188;MQ=69.33;MQ0=0;MQRankSum=-0.455;QD=7.48;ReadPosRankSum=1.782;VQSLOD=0.5890;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:34.32:0,34,356	0/0:12,0:12:33.08:0,33,358	0/1:8,1:10:24.60:25,0,113	0/1:6,0:7:7.54:8,0,136	0/0:27,2:29:42.18:0,42,739	0/1:21,0:21:5.04:186,0,5	1/1:13,0:13:31.51:161,32,0	0/0:35,1:36:64.18:0,64,929	0/0:19,0:19:57.07:0,57,614	0/0:25,0:25:69.19:0,69,762	0/0:21,0:21:58.71:0,59,633	1/1:17,0:17:34.25:172,34,0	1/1:14,0:14:4.44:105,4,0	1/1:15,0:16:10.42:97,10,0	0/0:16,0:16:42.10:0,42,457	0/0:11,0:11:30.07:0,30,325	0/0:20,0:20:57.15:0,57,629	0/0:21,0:21:54.13:0,54,586	0/0:17,1:18:4:0,4,261	0/0:19,2:21:28.08:0,28,530	0/0:13,0:13:36.10:0,36,398	1/1:9,0:9:25.76:132,26,0	1/1:25,0:25:35.10:251,35,0	1/1:14,0:14:28.23:150,28,0	0/0:18,0:18:51.14:0,51,564	0/0:25,1:26:52.24:0,52,795	0/0:25,0:25:63.16:0,63,688	0/0:13,1:14:9.96:0,10,323
chr10	94072342	.	AC	A	4122.99	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=10.626;DP=519;FS=10.832;HRun=1;HaplotypeScore=58.3080;InbreedingCoeff=0.7722;MQ=70.99;MQ0=0;MQRankSum=-0.384;QD=25.29;ReadPosRankSum=2.268;VQSLOD=2.4101;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:12.17:65,0,12	0/0:13,0:13:39.10:0,39,487	0/1:9,0:9:18.60:19,0,180	0/1:10,0:10:10.68:11,0,173	0/0:28,0:28:77.43:0,77,951	1/1:6,16:22:61.73:761,62,0	1/1:0,15:15:33.11:458,33,0	0/0:41,0:41:99:0,117,1385	0/0:19,0:19:57.19:0,57,755	0/0:25,0:25:74.02:0,74,921	0/0:24,0:24:48.04:0,48,810	1/1:0,16:16:36.12:499,36,0	1/1:0,12:12:27.09:374,27,0	1/1:2,12:14:29.41:360,29,0	0/0:16,0:16:48.11:0,48,590	0/0:12,0:12:36.09:0,36,447	0/0:21,0:21:63.16:0,63,792	0/0:20,0:20:60.03:0,60,700	0/0:12,0:12:33.97:0,34,402	0/0:22,0:22:58.32:0,58,746	0/0:14,0:14:42.09:0,42,509	1/1:0,10:10:30.06:394,30,0	1/1:0,26:26:57.16:769,57,0	1/1:0,14:14:30.09:413,30,0	0/0:21,0:21:63.15:0,63,767	0/0:28,0:28:82.13:0,82,1042	0/0:26,0:26:78.08:0,78,912	0/0:14,0:14:37.92:0,38,475
chr10	94072764	.	CT	C	373.07	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.809;DP=535;FS=0.000;HRun=4;HaplotypeScore=48.7594;InbreedingCoeff=0.9915;MQ=75.40;MQ0=0;MQRankSum=-2.972;QD=28.70;ReadPosRankSum=-0.289;VQSLOD=2.5809;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:39.12:468,39,0	0/0:8,0:8:24.08:0,24,336	0/0:9,0:9:24.08:0,24,327	0/0:13,0:13:38.77:0,39,491	0/0:25,0:25:72.24:0,72,1007	0/0:22,0:22:60.67:0,61,842	0/0:14,0:14:42.14:0,42,588	0/0:34,0:34:96.31:0,96,1330	0/0:27,0:27:81.27:0,81,1134	0/0:23,0:23:63.19:0,63,840	0/0:24,0:24:72.24:0,72,1007	0/0:19,0:19:57.18:0,57,779	0/0:20,0:20:60.19:0,60,823	0/0:19,0:19:57.19:0,57,798	0/0:21,0:21:60.19:0,60,823	0/0:22,0:22:66.22:0,66,923	0/0:15,0:15:45.12:0,45,604	0/0:13,0:13:39.13:0,39,546	0/0:22,0:22:57.17:0,57,763	0/0:23,0:23:69.22:0,69,941	0/0:7,0:7:21.07:0,21,294	0/0:16,0:16:48.14:0,48,638	0/0:16,0:16:45.15:0,45,630	0/0:17,0:17:45.15:0,45,630	0/0:19,0:19:54.18:0,54,756	0/0:25,0:25:75.24:0,75,1021	0/0:38,0:38:99:0,111,1527	0/0:11,0:11:33.11:0,33,462
chr10	94073064	.	A	AG	10829.24	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=10.109;DP=711;FS=4.835;HRun=0;HaplotypeScore=92.6556;InbreedingCoeff=0.9997;MQ=81.96;MQ0=0;MQRankSum=-2.397;QD=44.56;ReadPosRankSum=5.144;VQSLOD=4.6303;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,48:48:99:2254,141,0	0/0:8,0:8:24.08:0,24,336	0/0:28,0:28:78.22:0,78,1041	0/0:28,0:29:62.91:0,63,932	0/0:26,0:26:78.23:0,78,1056	1/1:0,12:12:36.12:576,36,0	1/1:1,23:24:66.22:1047,66,0	0/0:24,0:24:72.21:0,72,946	0/0:24,0:24:72.23:0,72,985	0/0:27,0:27:81.26:0,81,1115	0/0:18,0:18:54.18:0,54,755	1/1:1,25:26:72.25:1151,72,0	1/1:1,18:19:48:767,48,0	1/1:1,27:28:78.27:1247,78,0	0/0:27,0:27:81.26:0,81,1115	0/0:25,0:25:75.24:0,75,1031	0/0:30,0:30:81.25:0,81,1113	0/0:16,0:16:45.15:0,45,629	0/0:24,0:24:72.22:0,72,988	0/0:33,0:33:99:0,99,1358	0/0:46,0:46:99:0,129,1802	1/1:0,26:26:72.25:1151,72,0	1/1:0,19:19:51.17:815,51,0	1/1:0,41:41:99:1823,114,0	0/0:15,0:15:45.13:0,45,609	0/0:26,0:26:78.23:0,78,1055	0/0:26,0:26:78.24:0,78,1073	0/0:16,0:16:45.15:0,45,629
chr10	94073564	.	TTTG	T	6567.75	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.621;DP=676;FS=7.683;HRun=0;HaplotypeScore=98.8086;InbreedingCoeff=0.9999;MQ=75.68;MQ0=0;MQRankSum=-4.612;QD=35.50;ReadPosRankSum=4.049;VQSLOD=5.1581;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:63.17:916,63,0	0/0:17,0:17:42.12:0,42,786	0/0:25,0:23:63.20:0,63,1245	0/0:26,0:26:62.15:0,62,1062	0/0:36,0:36:99:0,105,2199	1/1:2,22:24:63.21:942,63,0	1/1:4,18:22:45.15:677,45,0	0/0:33,0:33:69.24:0,69,1419	0/0:27,0:27:75.26:0,75,1554	0/0:26,0:26:69.24:0,69,1409	0/0:20,0:20:60.21:0,60,1245	1/1:0,20:20:54.18:813,54,0	1/1:0,23:23:57.19:858,57,0	1/1:3,13:16:35.92:542,36,0	0/0:23,0:23:66.23:0,66,1390	0/0:25,0:25:66.23:0,66,1384	0/0:23,0:23:60.18:0,60,1214	0/0:22,0:22:51.17:0,51,999	0/0:28,0:28:69.24:0,69,1443	0/0:35,0:35:99:0,102,2129	0/0:23,0:23:60.20:0,60,1218	1/1:1,16:17:42.14:631,42,0	1/1:3,18:21:48.02:646,48,0	1/1:1,15:16:36.12:542,36,0	0/0:30,0:30:84.29:0,84,1739	0/0:24,0:24:60.21:0,60,1247	0/0:32,1:33:48.19:0,48,1825	0/0:15,0:15:45.15:0,45,910
chr10	94074250	.	GA	G	397.64	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.775;DP=546;FS=2.072;HRun=8;HaplotypeScore=67.0148;InbreedingCoeff=0.9892;MQ=78.39;MQ0=0;MQRankSum=-2.586;QD=20.93;ReadPosRankSum=-1.535;VQSLOD=3.1846;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.18:0,60,725	0/0:14,0:14:42.13:0,42,506	0/0:16,0:16:32.31:0,32,363	0/0:12,0:12:21.01:0,21,236	0/0:24,0:24:60.18:0,60,725	0/0:22,0:22:63.19:0,63,761	0/0:19,0:19:54.11:0,54,635	0/0:30,0:30:84.26:0,84,1015	0/0:16,0:16:45.13:0,45,533	0/0:20,0:20:54.16:0,54,644	0/0:16,0:16:45.14:0,45,544	0/0:8,0:8:21.06:0,21,254	0/0:18,0:18:54.16:0,54,642	0/0:14,0:14:39.12:0,39,469	0/0:25,0:25:69.21:0,69,833	0/0:20,0:20:54.17:0,54,650	1/1:2,17:19:51.08:493,51,0	0/0:13,0:13:39.12:0,39,469	0/0:28,0:28:84.25:0,84,1003	0/0:37,0:37:99:0,99,1168	0/0:10,0:10:24.07:0,24,290	0/0:22,0:22:57.17:0,57,688	0/0:15,0:15:39.12:0,39,472	0/0:15,0:15:39.12:0,39,471	0/0:26,0:26:69.17:0,69,807	0/0:28,0:28:72.21:0,72,860	0/0:20,0:20:57.15:0,57,665	0/0:16,0:16:36.11:0,36,435
chr10	94074272	.	A	AAC	6714.89	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-14.078;DP=563;FS=9.230;HRun=0;HaplotypeScore=66.1514;InbreedingCoeff=0.9983;MQ=77.67;MQ0=1;MQRankSum=-0.148;QD=39.50;ReadPosRankSum=4.375;VQSLOD=6.8258;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:48.16:816,48,0	0/0:14,0:14:42.14:0,42,546	0/0:17,0:17:36.09:0,36,438	0/0:13,0:13:24.05:0,24,291	0/0:21,0:21:57.16:0,57,713	1/1:1,22:23:63.22:1071,63,0	1/1:3,20:23:57.20:969,57,0	0/0:28,0:28:60.17:0,60,746	0/0:15,0:15:33.11:0,33,429	0/0:33,0:33:90.27:0,90,1134	0/0:15,0:15:33.11:0,33,429	1/1:1,8:9:24.08:407,24,0	1/1:3,19:22:51.17:867,51,0	1/1:3,20:23:51.17:866,51,0	0/0:22,0:22:66.18:0,66,828	0/0:17,0:17:39.13:0,39,507	0/0:17,0:17:42.10:0,42,516	0/0:14,0:14:41.97:0,42,521	0/0:34,0:34:90.26:0,90,1121	0/0:40,0:40:99:0,105,1337	0/0:10,0:10:21.04:0,21,244	1/1:3,14:17:39.13:647,39,0	1/1:2,15:17:29.72:510,30,0	1/1:1,13:14:33.11:561,33,0	0/0:21,0:21:51.11:0,51,618	0/0:27,0:27:66.21:0,66,858	0/0:23,0:23:63.16:0,63,776	0/0:12,0:12:27.09:0,27,351
chr10	94074371	.	G	GC	3486.63	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-8.474;DP=429;FS=5.681;HRun=7;HaplotypeScore=47.1233;InbreedingCoeff=0.9852;MQ=90.37;MQ0=0;MQRankSum=-1.075;QD=31.70;ReadPosRankSum=2.006;VQSLOD=3.8126;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,6:10:24.07:290,24,0	0/0:6,0:6:18.03:0,18,174	0/0:23,0:19:31.27:0,31,286	0/0:22,0:20:44.86:0,45,449	0/0:18,0:18:51.07:0,51,487	1/1:0,11:11:30.09:362,30,0	1/1:2,17:19:42.13:507,42,0	0/0:18,0:18:38.75:0,39,364	0/0:15,0:15:42.02:0,42,391	0/0:23,0:23:57.09:0,57,551	0/0:18,0:18:42.06:0,42,406	1/1:0,4:4:9.03:109,9,0	1/1:3,13:16:45.14:539,45,0	1/1:4,11:15:39.12:467,39,0	0/0:21,0:21:57.09:0,57,550	0/0:13,0:13:36.05:0,36,348	0/0:19,0:19:54.06:0,54,514	0/0:12,0:12:33.05:0,33,318	0/0:16,0:16:39.06:0,39,376	0/0:28,0:28:72.11:0,72,694	0/0:12,0:12:24.04:0,24,231	1/1:2,16:18:54.14:634,54,0	1/1:0,10:10:27.08:326,27,0	1/1:2,5:7:21.06:253,21,0	0/0:15,0:15:27.04:0,27,261	0/0:18,0:18:48.07:0,48,461	0/0:13,0:13:36.04:0,36,341	0/0:9,0:9:14.92:0,15,126
chr10	94074820	.	T	TG	5067.34	PASS	AB=0.665;AC=28;AF=0.500;AN=56;BaseQRankSum=-9.605;DP=563;FS=10.145;HRun=9;HaplotypeScore=78.6226;InbreedingCoeff=0.6242;MQ=77.39;MQ0=0;MQRankSum=-0.928;QD=16.09;ReadPosRankSum=-3.096;VQSLOD=3.5169;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,123,1067	1/1:1,8:9:15.04:166,15,0	0/0:17,0:18:8.53:0,9,164	0/1:10,0:10:3.19:3,0,131	0/1:6,18:24:10:356,0,10	0/0:15,1:16:11.80:0,12,331	0/0:19,0:19:50.94:0,51,434	1/1:10,12:23:33.01:338,33,0	0/1:4,13:17:1.92:208,0,2	1/1:9,14:23:30.08:332,30,0	0/1:6,9:15:5:178,0,5	0/0:17,0:17:32.95:0,33,282	0/0:15,1:16:17.66:0,18,314	0/0:25,0:24:59.96:0,60,516	1/1:8,17:25:36.57:400,37,0	1/1:5,9:14:27.07:299,27,0	0/0:25,0:25:65.96:0,66,567	1/1:9,22:31:15.11:612,15,0	1/1:5,7:12:18.03:189,18,0	1/1:7,13:20:30.03:310,30,0	1/1:9,18:27:54.15:597,54,0	0/0:21,0:21:53.98:0,54,469	0/0:13,0:13:20.97:0,21,182	0/0:21,1:22:20.77:0,21,403	0/1:5,12:17:15.80:296,0,16	1/1:7,8:15:27.04:277,27,0	0/1:12,14:27:79.08:339,0,79	1/1:0,6:6:15.04:166,15,0
chr10	94075861	.	GT	G	8197	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=8.829;DP=552;FS=4.151;HRun=9;HaplotypeScore=55.9458;InbreedingCoeff=0.9469;MQ=70.93;MQ0=1;MQRankSum=-1.852;QD=22.77;ReadPosRankSum=2.523;VQSLOD=5.8562;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:27.06:0,27,300	1/1:0,10:10:27.01:247,27,0	0/0:15,1:13:2.60:0,3,260	0/0:19,0:17:35.90:0,36,366	1/1:1,36:37:70.33:890,70,0	0/0:31,0:31:81.22:0,81,923	0/0:14,0:14:39.10:0,39,441	1/1:8,23:31:69:622,69,0	1/1:0,17:17:48.02:437,48,0	1/1:6,21:27:29.05:501,29,0	1/1:1,23:24:63.02:576,63,0	0/0:18,0:18:50.98:0,51,568	0/0:21,0:21:57.15:0,57,647	0/0:10,0:10:30.09:0,30,346	1/1:0,19:19:51.03:467,51,0	1/1:0,17:17:48.03:439,48,0	1/1:1,16:17:28.07:319,28,0	1/1:2,17:19:44.93:401,45,0	1/1:4,8:12:21.01:192,21,0	1/1:6,31:37:86.96:787,87,0	1/1:1,10:11:27.01:247,27,0	0/0:21,0:22:53.98:0,54,594	0/0:21,0:21:57.12:0,57,628	0/0:8,0:8:24.06:0,24,266	1/1:0,21:21:60.03:549,60,0	1/1:1,28:29:84.02:760,84,0	1/1:3,28:31:81.03:737,81,0	1/1:0,1:1:3:27,3,0
chr10	94076623	.	TCTATTAAAGATC	T	8950.69	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.701;DP=444;FS=15.970;HRun=0;HaplotypeScore=157.1656;InbreedingCoeff=0.9914;MQ=81.22;MQ0=0;MQRankSum=-12.794;QD=84.44;ReadPosRankSum=0.680;VQSLOD=4.0487;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:16:24.08:790,24,0	0/0:9,0:9:27.09:0,27,1403	0/0:19,0:18:44.34:0,44,2137	0/0:9,0:9:27.07:0,27,1403	0/0:23,0:23:69.24:0,69,3994	1/1:0,13:13:33.11:1250,33,0	1/1:1,10:11:27.09:968,27,0	0/0:29,0:29:81.27:0,81,4287	0/0:13,0:13:39.13:0,39,2295	0/0:31,0:31:93.31:0,93,5306	0/0:22,0:22:66.23:0,66,3765	1/1:0,11:11:27.09:1026,27,0	1/1:0,8:8:21.07:798,21,0	1/1:2,14:16:33.11:1254,33,0	0/0:12,0:12:33.11:0,33,2047	0/0:7,0:7:21.07:0,21,1303	0/0:22,0:22:63.22:0,63,3701	0/0:13,0:13:36.07:0,36,2220	0/0:15,0:15:42.12:0,42,2187	0/0:29,0:29:87.30:0,87,5087	0/0:6,0:6:18.06:0,18,997	1/1:1,10:11:30.01:909,30,0	1/1:0,15:15:42.14:1559,42,0	1/1:0,5:5:12.04:397,12,0	0/0:16,0:16:45.13:0,45,2576	0/0:21,0:21:60.21:0,60,3633	0/0:29,0:29:87.28:0,87,4717	0/0:13,0:13:39.13:0,39,2216
chr10	94077171	.	GT	G	5010.17	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=16.496;DP=502;FS=27.290;HRun=4;HaplotypeScore=68.0943;InbreedingCoeff=0.9953;MQ=79.29;MQ0=0;MQRankSum=-7.649;QD=34.32;ReadPosRankSum=0.104;VQSLOD=2.7103;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:22:57.17:681,57,0	0/0:6,0:6:18.06:0,18,249	0/0:21,0:21:55.43:0,55,750	0/0:11,0:11:26.93:0,27,350	0/0:24,0:24:69.21:0,69,925	1/1:0,16:16:48.15:575,48,0	1/1:0,9:9:27.08:324,27,0	0/0:36,0:36:99:0,105,1455	0/0:9,0:9:27.09:0,27,378	0/0:25,0:25:75.25:0,75,1051	0/0:24,0:24:69.23:0,69,966	1/1:0,15:15:45.14:539,45,0	1/1:1,14:15:45.12:524,45,0	1/1:2,15:17:48.14:570,48,0	0/0:19,0:19:57.19:0,57,798	0/0:15,0:15:45.15:0,45,627	0/0:13,0:13:27.06:0,27,357	0/0:17,0:17:51.14:0,51,694	0/0:20,0:20:57.17:0,57,768	0/0:21,0:21:60.20:0,60,840	0/0:8,0:8:24.08:0,24,336	1/1:1,20:21:63.19:755,63,0	1/1:0,24:24:72.22:863,72,0	1/1:2,5:6:15.05:180,15,0	0/0:17,0:17:51.17:0,51,711	0/0:27,0:27:81.27:0,81,1134	0/0:26,0:26:75.25:0,75,1050	0/0:17,0:17:48.16:0,48,672
chr10	94077206	.	TA	T	478.19	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.376;DP=506;FS=2.078;HRun=1;HaplotypeScore=81.1680;InbreedingCoeff=0.9314;MQ=69.66;MQ0=0;MQRankSum=-1.673;QD=26.57;ReadPosRankSum=1.229;VQSLOD=3.6325;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:46.91:0,47,291	0/0:6,0:6:18.06:0,18,263	0/0:10,0:10:30.09:0,30,407	0/0:7,0:7:15.68:0,16,122	0/0:24,0:24:72.24:0,72,1053	0/0:21,0:21:61.95:0,62,414	0/0:5,0:5:14.71:0,15,90	0/0:23,0:23:69.18:0,69,909	0/0:13,0:13:39.12:0,39,551	0/0:32,0:32:96.29:0,96,1352	0/0:25,0:25:75.25:0,75,1097	0/0:16,0:16:47.11:0,47,294	0/0:21,0:21:60.91:0,61,373	0/0:10,0:10:29.47:0,29,203	0/0:22,0:22:66.18:0,66,909	0/0:14,0:14:42.13:0,42,596	1/1:2,16:18:44.88:573,45,0	0/0:23,0:23:63.10:0,63,848	0/0:21,0:21:60.15:0,60,790	0/0:27,0:27:81.27:0,81,1175	0/0:9,0:9:27.05:0,27,354	0/0:21,0:21:52.56:0,53,339	0/0:30,0:30:88.49:0,88,616	0/0:6,0:5:11.77:0,12,72	0/0:18,0:18:54.17:0,54,770	0/0:27,0:27:81.24:0,81,1132	0/0:25,0:25:75.20:0,75,1037	0/0:16,0:16:48.14:0,48,680
chr10	94077207	.	A	AT	4562.21	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=4.192;DP=511;FS=12.360;HRun=7;HaplotypeScore=66.9626;InbreedingCoeff=0.9738;MQ=68.76;MQ0=0;MQRankSum=-7.142;QD=30.83;ReadPosRankSum=-1.123;VQSLOD=3.8579;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:16:42.09:491,42,0	0/0:7,0:7:18.02:0,18,174	0/0:9,0:9:21.03:0,21,202	0/0:7,0:7:7.50:0,7,51	0/0:24,0:24:72.12:0,72,695	1/1:3,19:22:54.17:652,54,0	1/1:1,4:5:12.04:145,12,0	0/0:23,0:23:51.03:0,51,480	0/0:13,0:13:36.06:0,36,348	0/0:31,0:31:87.13:0,87,837	0/0:28,0:28:75.11:0,75,724	1/1:1,16:17:45.14:543,45,0	1/1:1,21:22:60.18:725,60,0	1/1:2,8:10:27.08:325,27,0	0/0:22,0:22:57.09:0,57,550	0/0:14,0:14:39.06:0,39,377	0/0:18,0:18:16.51:0,17,47	0/0:23,0:23:51.03:0,51,484	0/0:22,0:22:45.06:0,45,435	0/0:27,0:27:81.13:0,81,782	0/0:9,0:9:24.02:0,24,226	1/1:3,18:21:63.19:755,63,0	1/1:3,26:29:46.12:781,46,0	1/1:0,6:5:12.04:145,12,0	0/0:18,0:18:48.07:0,48,463	0/0:27,0:27:72.10:0,72,691	0/0:26,0:26:66.10:0,66,637	0/0:15,0:15:45.07:0,45,435
chr10	94077533	.	C	CTT	11779.71	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-9.868;DP=683;FS=2.199;HRun=1;HaplotypeScore=75.9756;InbreedingCoeff=0.9974;MQ=92.92;MQ0=0;MQRankSum=-3.506;QD=49.91;ReadPosRankSum=1.945;VQSLOD=4.9543;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:37:99:1912,99,0	0/0:10,0:10:30.07:0,30,415	0/0:23,0:23:63.21:0,63,924	0/0:35,0:35:96.23:0,96,1322	0/0:20,0:20:57.18:0,57,850	1/1:0,23:23:60.21:1159,60,0	1/1:1,32:33:87.30:1681,87,0	0/0:39,0:39:99:0,111,1605	0/0:29,0:29:84.29:0,84,1285	0/0:25,0:25:69.23:0,69,1038	0/0:29,0:29:81.27:0,81,1235	1/1:2,20:23:57.19:1081,57,0	1/1:1,24:25:57.20:1097,57,0	1/1:0,22:23:66.23:1275,66,0	0/0:19,0:19:54.18:0,54,827	0/0:20,0:20:60.19:0,60,893	0/0:27,0:27:81.19:0,81,1164	0/0:26,0:26:69.23:0,69,1056	0/0:29,0:29:84.29:0,84,1285	0/0:23,0:23:66.21:0,66,988	0/0:22,0:22:66.22:0,66,1008	1/1:3,23:27:66.23:1274,66,0	1/1:0,24:24:63.22:1198,63,0	1/1:0,21:21:57.20:1101,57,0	0/0:21,0:21:63.20:0,63,944	0/0:15,0:15:45.15:0,45,689	0/0:30,0:30:87.26:0,87,1286	0/0:5,0:5:15.03:0,15,207
chr10	94077808	.	AAAAAAAAAAAAAAAG	A	3910.29	PASS	AB=0.737;AC=15;AF=0.268;AN=56;BaseQRankSum=10.428;DP=595;FS=8.367;HRun=0;HaplotypeScore=179.7720;InbreedingCoeff=0.6394;MQ=51.53;MQ0=34;MQRankSum=-6.680;QD=21.37;ReadPosRankSum=7.801;VQSLOD=1.1170;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:49,0:48:35.33:35,0,500	0/0:11,0:11:32.41:0,32,1078	0/0:53,0:8:11.59:0,12,193	0/0:42,0:7:18.06:0,18,531	0/0:19,0:19:47.26:0,47,1268	1/1:4,15:19:26.85:1009,27,0	0/1:9,18:25:18.32:613,0,18	0/0:24,0:24:57.07:0,57,1901	0/0:14,0:12:35.79:0,36,1213	0/0:26,0:22:66.22:0,66,2145	0/0:24,0:24:69.24:0,69,2715	0/1:4,7:9:12.37:217,0,12	1/1:6,8:13:0.55:428,1,0	1/1:3,16:19:17.35:674,17,0	0/0:12,0:9:27.09:0,27,992	0/0:12,0:12:33.11:0,33,1562	0/0:27,0:26:65.02:0,65,2585	0/0:25,0:25:60.18:0,60,2338	0/0:17,0:17:48.16:0,48,1571	0/0:29,0:29:86.87:0,87,2840	0/0:13,0:13:33.10:0,33,1099	1/1:0,11:11:14.70:375,15,0	1/1:5,14:18:10.29:425,10,0	1/1:3,11:14:5.49:132,5,0	0/0:12,0:11:27.06:0,27,1134	0/0:17,0:17:51.09:0,51,1485	0/0:24,0:23:68.56:0,69,2367	0/0:11,0:11:32.98:0,33,514
chr10	94077812	.	AAAAAAAAAAAG	A	2846.36	PASS	AB=0.615;AC=17;AF=0.304;AN=56;BaseQRankSum=10.586;DP=580;FS=6.878;HRun=0;HaplotypeScore=143.9276;InbreedingCoeff=0.8156;MQ=51.79;MQ0=31;MQRankSum=-7.702;QD=16.84;ReadPosRankSum=8.271;VQSLOD=0.7995;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,30:47:66.98:261,0,67	0/0:11,0:11:31.13:0,31,607	0/0:45,0:6:7.52:0,8,140	0/0:40,0:8:20.65:0,21,351	0/0:19,0:19:42.56:0,43,646	1/1:15,0:16:27.09:702,27,0	1/1:26,0:24:4.49:454,4,0	0/0:23,0:23:59.20:0,59,1061	0/0:15,0:13:37.42:0,37,689	0/0:27,0:23:68.33:0,68,1084	0/0:24,0:24:57.01:0,57,1446	1/1:10,0:8:5.89:157,6,0	1/1:13,0:12:10.34:311,10,0	1/1:17,0:17:18.06:468,18,0	0/0:15,0:12:35.25:0,35,606	0/0:13,0:13:28.02:0,28,960	0/0:27,0:26:62.77:0,63,1492	0/0:24,0:24:63.18:0,63,1410	0/0:19,0:19:50.98:0,51,859	0/0:30,0:30:83.99:0,84,1471	0/0:14,0:14:38.05:0,38,633	1/1:11,0:11:14.92:272,15,0	1/1:17,0:16:11.99:313,12,0	1/1:11,0:11:5.98:99,6,0	0/0:12,0:11:24.06:0,24,718	0/0:19,0:19:47.68:0,48,791	0/0:25,0:24:66.09:0,66,1281	0/0:9,0:9:9:0,9,136
chr10	94079698	.	G	GCACA	2176.65	PASS	AB=0.942;AC=38;AF=0.864;AN=44;BaseQRankSum=0.022;DP=596;FS=0.000;HRun=0;HaplotypeScore=129.5416;InbreedingCoeff=0.3005;MQ=64.31;MQ0=22;MQRankSum=-0.728;QD=4.73;ReadPosRankSum=-1.126;VQSLOD=2.2359;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:9,0:15:5.49:24,5,0	1/1:18,0:18:3.01:34,3,0	0/1:20,0:19:0:0,0,0	./.	1/1:23,0:23:6.46:63,6,0	1/1:24,0:23:18.53:302,19,0	0/1:7,2:10:23.85:63,0,24	1/1:21,0:20:10.93:137,11,0	1/1:16,0:14:2.04:6,2,0	1/1:21,0:21:9.02:136,9,0	1/1:16,3:19:2.99:70,3,0	1/1:15,2:20:5.75:82,6,0	1/1:19,7:26:18.48:364,18,0	./.	1/1:15,0:15:9.02:124,9,0	0/1:21,0:17:0:1,0,0	1/1:56,0:52:17.99:248,18,0	0/1:30,0:29:0.05:0,0,0	1/1:14,0:12:0.41:0,0,0	1/1:32,0:31:2.04:6,2,0	1/1:17,0:17:5.73:110,6,0	1/1:31,0:28:23.74:334,24,0	1/1:9,0:9:9.03:167,9,0	0/0:6,0:6:2.91:0,3,27
chr10	94079729	.	C	CACACACAT	1022.07	PASS	AB=0.910;AC=16;AF=0.286;AN=56;BaseQRankSum=2.458;DP=641;FS=1.176;HRun=0;HaplotypeScore=147.3587;InbreedingCoeff=-0.0023;MQ=47.87;MQ0=31;MQRankSum=1.329;QD=3.09;ReadPosRankSum=5.537;VQSLOD=2.1694;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:20.83:0,21,150	0/0:4,0:2:2.90:0,3,16	0/0:19,0:5:11.99:0,12,120	0/0:32,0:12:17.74:0,18,193	0/0:19,0:19:17.97:0,18,148	1/1:24,0:24:30.51:366,31,0	0/0:5,0:22:1.91:0,2,18	0/0:18,0:17:41.28:0,41,312	0/0:22,0:22:25.17:0,25,314	0/0:29,0:27:23.79:0,24,397	0/0:9,0:9:1.19:0,1,129	0/1:5,16:28:6.41:318,0,6	0/1:7,13:21:9.77:10,0,16	1/1:4,16:23:5.61:179,6,0	0/0:29,0:29:34.61:0,35,331	0/0:15,0:15:3.48:0,3,92	0/1:29,0:28:33.29:33,0,138	0/1:15,0:15:19.38:19,0,201	0/1:10,0:10:64.66:65,0,85	0/0:19,0:13:5.95:0,6,44	0/1:63,0:57:49.69:50,0,491	0/1:29,0:29:11.14:55,0,11	1/1:9,0:14:3.15:25,3,0	0/0:11,18:33:5.84:0,6,42	0/1:18,0:18:20.51:21,0,98	0/1:34,0:31:14.33:14,0,416	0/1:15,0:15:25.61:26,0,140	0/0:8,0:8:17.98:0,18,180
chr10	94079731	.	C	CACACAT	639.40	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=5.407;DP=639;FS=6.395;HRun=0;HaplotypeScore=135.9153;InbreedingCoeff=-0.1331;MQ=49.18;MQ0=30;MQRankSum=-0.982;QD=1.97;ReadPosRankSum=6.557;VQSLOD=1.6146;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:23.94:0,24,191	0/0:4,0:2:2.90:0,3,16	0/0:19,0:4:11.99:0,12,106	0/0:34,0:14:30.09:0,30,271	0/0:19,0:19:17.48:0,17,120	0/1:25,0:25:65.82:66,0,250	0/0:22,0:21:1.83:0,2,19	0/0:17,0:16:40.41:0,40,325	0/0:21,0:21:25.33:0,25,314	0/0:30,0:28:27.85:0,28,504	0/1:10,0:10:10.20:10,0,118	0/1:29,0:28:6.31:221,0,6	0/1:26,0:23:22.54:31,0,23	1/1:23,0:23:5.60:135,6,0	0/0:30,0:30:28.08:0,28,366	0/1:14,0:14:8.32:8,0,75	0/1:30,0:29:80.68:81,0,164	0/1:16,0:16:37.43:37,0,219	0/1:11,0:11:62.56:63,0,101	0/0:19,0:12:5.95:0,6,44	0/1:61,0:56:49.83:50,0,488	0/0:22,6:30:20.67:0,21,150	1/1:16,0:13:3.47:26,3,0	0/0:32,0:30:8.83:0,9,66	0/1:18,0:18:22.86:23,0,97	0/1:33,0:30:18.46:18,0,443	0/1:13,0:13:26.27:26,0,142	0/0:8,0:8:17.99:0,18,173
chr10	94080697	.	TGGTTCTG	T	1645.89	PASS	AB=0.872;AC=16;AF=0.421;AN=38;BaseQRankSum=1.041;DP=205;FS=62.310;HRun=0;HaplotypeScore=53.7382;InbreedingCoeff=-0.7820;MQ=40.62;MQ0=49;MQRankSum=3.152;QD=9.63;ReadPosRankSum=-1.590;VQSLOD=-0.7327;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:3,0:3:62.29:96,0,62	0/1:7,1:3:38.13:40,0,38	0/0:7,0:3:2.96:0,3,19	0/1:10,0:9:97.44:97,0,345	./.	./.	0/1:10,0:10:69.82:70,0,371	0/0:7,0:7:18.06:0,18,523	0/1:6,5:8:99:106,0,250	0/1:7,6:12:99:204,0,299	./.	./.	./.	0/1:4,0:5:72.37:72,0,167	0/1:5,0:4:32.72:33,0,154	0/1:11,0:9:70.78:71,0,333	0/0:2,0:1:3.01:0,3,38	0/1:15,5:15:99:188,0,608	0/1:7,2:8:71.25:71,0,335	0/1:9,0:5:35.42:35,0,95	./.	./.	./.	0/1:12,0:9:99:136,0,271	0/1:11,6:13:99:208,0,581	0/1:14,0:12:99:201,0,330	0/1:7,0:4:73.73:140,0,74
chr10	94081168	.	C	CT	8937.90	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-3.832;DP=525;FS=7.161;HRun=8;HaplotypeScore=104.7163;InbreedingCoeff=0.9572;MQ=63.63;MQ0=1;MQRankSum=-3.523;QD=27.84;ReadPosRankSum=-0.966;VQSLOD=3.9501;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:38.23:448,38,0	0/0:10,0:10:29.99:0,30,268	0/0:13,0:12:29.64:0,30,274	0/0:8,0:9:20.05:0,20,171	0/0:27,0:27:69.01:0,69,627	1/1:8,17:24:48.14:565,48,0	1/1:1,3:4:9.03:104,9,0	1/1:2,26:28:69.18:777,69,0	0/0:24,0:24:57.01:0,57,517	0/0:30,0:30:66.02:0,66,604	0/0:14,0:14:39.01:0,39,357	1/1:1,12:13:36.11:415,36,0	1/1:4,14:18:51.08:557,51,0	1/1:5,18:23:57.17:655,57,0	0/0:15,0:15:36.01:0,36,330	0/0:14,0:14:39.02:0,39,357	1/1:3,20:22:60.18:692,60,0	0/0:11,1:12:1.38:0,1,260	1/1:6,17:24:59.99:651,60,0	1/1:3,16:19:45.09:505,45,0	1/1:1,15:16:36.11:415,36,0	1/1:4,25:29:73.42:819,73,0	1/1:1,9:10:18.63:238,19,0	1/1:1,10:10:27.08:311,27,0	0/0:36,0:36:93.04:0,93,851	1/1:0,26:26:75.18:836,75,0	1/1:2,22:24:63.19:726,63,0	1/1:0,6:7:20.89:222,21,0
chr10	94081197	.	ATTATTTACATTTCAAATG	A	10579.33	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=13.260;DP=466;FS=4.381;HRun=0;HaplotypeScore=255.8734;InbreedingCoeff=0.9048;MQ=52.48;MQ0=10;MQRankSum=-11.452;QD=92.80;ReadPosRankSum=4.647;VQSLOD=3.9232;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,9:13:27.09:1323,27,0	0/0:8,0:8:24.08:0,24,1519	0/1:9,0:6:8.25:8,0,54	0/0:9,0:4:9.02:0,9,198	0/0:28,0:28:75.26:0,75,5584	1/1:4,11:14:30.10:1528,30,0	1/1:2,5:7:18.03:785,18,0	0/0:22,0:20:60.19:0,60,3519	0/0:17,0:17:51.18:0,51,4018	0/0:26,0:26:72.25:0,72,5737	0/0:13,0:13:33.11:0,33,2855	1/1:1,7:8:21.07:1070,21,0	1/1:6,9:15:33.11:1598,33,0	1/1:4,9:13:30.09:1392,30,0	0/0:20,0:20:57.20:0,57,4837	0/0:13,0:13:36.12:0,36,3038	0/0:27,0:26:72.25:0,72,5669	0/0:11,0:11:30.10:0,30,2399	0/0:24,0:20:57.20:0,57,4114	0/0:22,0:22:60.21:0,60,4286	0/0:18,0:18:51.18:0,51,4368	1/1:7,12:19:36.12:1833,36,0	1/1:2,4:6:12.04:583,12,0	1/1:4,4:7:9.03:458,9,0	0/0:37,0:37:96.33:0,96,7590	0/0:21,0:21:60.21:0,60,4670	0/0:26,0:26:66.21:0,66,4828	0/0:10,0:10:24.08:0,24,1815
chr10	94081255	.	C	CTT	4981.20	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.313;DP=487;FS=6.354;HRun=0;HaplotypeScore=123.7333;InbreedingCoeff=0.9867;MQ=54.61;MQ0=5;MQRankSum=-10.399;QD=37.45;ReadPosRankSum=2.828;VQSLOD=6.6748;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:57.18:770,57,0	0/0:7,0:7:21.06:0,21,319	0/0:26,0:15:41.86:0,42,610	0/0:15,0:10:27.03:0,27,361	0/0:20,0:20:51.17:0,51,812	1/1:1,13:14:42.09:544,42,0	1/1:1,15:16:45.15:627,45,0	0/0:27,0:24:60.20:0,60,935	0/0:24,0:24:66.23:0,66,1073	0/0:16,0:16:48.15:0,48,759	0/0:12,0:12:33.09:0,33,490	1/1:1,18:20:60.19:787,60,0	1/1:0,16:15:45.15:610,45,0	1/1:1,14:16:48.14:598,48,0	0/0:23,0:23:57.19:0,57,929	0/0:11,0:11:33.11:0,33,538	0/0:21,0:21:63.20:0,63,993	0/0:5,0:5:15.05:0,15,245	0/0:22,0:19:57.18:0,57,876	0/0:23,0:23:60.20:0,60,954	0/0:33,0:33:96.33:0,96,1566	1/1:0,13:13:39.12:507,39,0	1/1:0,4:4:9.03:117,9,0	1/1:1,12:12:29.71:423,30,0	0/0:24,0:24:60.20:0,60,969	0/0:25,0:25:75.26:0,75,1220	0/0:12,0:12:36.11:0,36,562	0/0:8,0:8:21.05:0,21,311
chr10	94081256	.	C	CT	2849.37	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.505;DP=490;FS=8.085;HRun=0;HaplotypeScore=123.8515;InbreedingCoeff=0.9851;MQ=54.47;MQ0=4;MQRankSum=-9.091;QD=20.35;ReadPosRankSum=2.444;VQSLOD=4.7237;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,19:26:59.27:460,59,0	0/0:7,0:7:18.06:0,18,251	0/0:26,0:15:42.03:0,42,548	0/0:16,0:11:26.82:0,27,296	0/0:20,0:20:51.12:0,51,670	1/1:0,13:14:38.44:323,38,0	1/1:1,15:16:44.98:400,45,0	0/0:25,0:23:60.03:0,60,730	0/0:24,0:24:69.19:0,69,920	0/0:15,0:15:45.15:0,45,629	0/0:11,0:11:25.65:0,26,366	1/1:2,18:20:58.91:479,59,0	1/1:0,16:15:44.96:384,45,0	1/1:4,14:18:48.90:370,49,0	0/0:22,0:22:57.19:0,57,796	0/0:11,0:11:33.11:0,33,461	0/0:20,0:20:60.15:0,60,814	0/0:5,0:5:15.05:0,15,209	0/0:21,0:18:53.99:0,54,707	0/0:23,0:23:60.17:0,60,787	0/0:34,0:34:96.32:0,96,1338	1/1:0,13:13:38.72:308,39,0	1/1:0,4:4:8.96:68,9,0	1/1:1,12:12:29.93:270,30,0	0/0:26,0:26:60.17:0,60,788	0/0:25,0:25:75.25:0,75,1039	0/0:11,0:11:33.11:0,33,450	0/0:8,0:8:18.04:0,18,232
chr10	94082050	.	AT	A	1004.50	PASS	AB=0.687;AC=16;AF=0.286;AN=56;BaseQRankSum=7.863;DP=557;FS=14.889;HRun=5;HaplotypeScore=51.5651;InbreedingCoeff=0.5940;MQ=43.80;MQ0=20;MQRankSum=-8.372;QD=9.22;ReadPosRankSum=2.294;VQSLOD=0.0942;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:10:9.02:102,9,0	0/0:15,0:12:24.07:0,24,313	0/0:10,0:5:15.02:0,15,182	0/0:18,0:7:21.06:0,21,275	0/0:44,0:37:75.21:0,75,1004	1/1:0,13:11:24.07:272,24,0	1/1:2,2:4:6.02:68,6,0	0/0:41,0:28:75.16:0,75,983	0/0:30,0:30:57.19:0,57,779	0/0:22,0:20:45.14:0,45,602	0/0:32,0:26:48.11:0,48,619	1/1:0,6:5:6.02:68,6,0	1/1:1,6:6:12.03:136,12,0	1/1:2,12:14:18.05:204,18,0	0/0:29,0:29:21.07:0,21,287	0/0:14,0:14:39.13:0,39,533	0/1:26,1:25:3.90:4,0,339	0/0:15,0:13:21.05:0,21,270	0/0:24,0:17:51.16:0,51,682	0/0:34,0:25:48.07:0,48,600	0/0:30,0:28:60.15:0,60,785	0/1:2,9:9:9.61:183,0,10	0/1:6,5:9:17.71:90,0,18	0/1:1,5:5:21.64:59,0,22	0/0:18,0:14:21.03:0,21,266	0/0:31,2:31:84.28:0,84,1148	0/0:33,0:32:66.19:0,66,857	0/0:6,0:5:3.01:0,3,41
chr10	94084841	.	AT	A	3483.99	PASS	AB=0.648;AC=15;AF=0.300;AN=50;BaseQRankSum=5.853;DP=605;FS=3.642;HRun=1;HaplotypeScore=46.5009;InbreedingCoeff=0.6784;MQ=32.38;MQ0=116;MQRankSum=-1.336;QD=21.51;ReadPosRankSum=0.435;VQSLOD=3.6887;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,16:15:20.63:302,0,21	0/0:10,0:7:11.99:0,12,162	./.	./.	0/0:36,0:19:6.02:0,6,96	1/1:2,22:21:48.16:670,48,0	0/1:5,3:4:35.71:97,0,36	0/0:39,0:8:24.08:0,24,371	0/0:15,0:13:27.09:0,27,431	0/0:37,0:27:81.27:0,81,1266	0/0:35,0:24:30.03:0,30,447	1/1:1,18:19:39.13:544,39,0	1/1:1,11:11:30.10:419,30,0	1/1:4,26:25:51.17:711,51,0	0/0:19,0:18:39.13:0,39,620	0/0:26,0:23:45.14:0,45,693	0/0:37,0:25:33.09:0,33,500	0/0:25,0:15:21.07:0,21,325	0/0:13,0:7:18.06:0,18,288	0/0:30,0:20:48.12:0,48,728	0/0:11,0:7:9.03:0,9,141	1/1:2,19:18:30.10:418,30,0	1/1:2,10:7:15.05:209,15,0	0/1:6,8:9:35.53:114,0,36	0/0:25,0:20:36.12:0,36,562	0/0:37,0:28:84.28:0,84,1314	0/0:44,0:38:75.26:0,75,1190	./.
chr10	94090440	.	CAAAGAAAAG	C	487.45	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.882;DP=592;FS=0.000;HRun=0;HaplotypeScore=166.5726;InbreedingCoeff=0.9420;MQ=70.89;MQ0=3;MQRankSum=-2.388;QD=20.31;ReadPosRankSum=-1.007;VQSLOD=2.6266;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,15:24:21.07:580,21,0	0/0:12,0:12:30.10:0,30,1232	0/0:36,0:29:47.26:0,47,1139	0/0:40,0:32:27.21:0,27,831	0/0:19,0:19:51.05:0,51,1917	0/0:15,0:15:21.07:0,21,591	0/0:17,0:17:33.03:0,33,1084	0/0:21,0:21:42.13:0,42,1330	0/0:17,0:17:42.14:0,42,1662	0/0:30,0:30:60.20:0,60,2472	0/0:14,0:14:33.10:0,33,1322	0/0:16,0:16:34.25:0,34,866	0/0:17,0:17:36.03:0,36,926	0/0:28,0:28:51.12:0,51,1407	0/0:20,0:20:48.16:0,48,1738	0/0:16,0:16:42.09:0,42,1730	0/0:33,0:33:72.04:0,72,2562	0/0:19,0:19:42.09:0,42,1531	0/0:13,0:13:24.06:0,24,825	0/0:30,0:30:57.20:0,57,2273	0/0:24,0:24:66.21:0,66,2387	0/0:16,0:15:27.02:0,27,613	0/0:11,0:11:12.04:0,12,392	0/0:31,0:28:69.18:0,69,2347	0/0:17,0:17:27.09:0,27,1072	0/0:20,0:20:57.15:0,57,2357	0/0:26,0:26:54.08:0,54,2123	0/0:6,0:6:15.05:0,15,696
chr10	94090472	.	AAAGG	A	3120.04	PASS	AB=0.810;AC=16;AF=0.286;AN=56;BaseQRankSum=9.507;DP=486;FS=7.544;HRun=0;HaplotypeScore=83.4953;InbreedingCoeff=0.8020;MQ=53.86;MQ0=6;MQRankSum=-2.919;QD=21.97;ReadPosRankSum=1.092;VQSLOD=2.3277;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:53.92:0,54,938	0/0:11,0:11:21.07:0,21,528	0/0:25,0:10:8.70:0,9,159	0/1:32,0:16:13.95:14,0,331	0/0:25,0:25:63.16:0,63,1429	1/1:2,14:15:33.11:547,33,0	0/1:6,7:13:12.84:355,0,13	0/0:10,0:10:15.05:0,15,335	0/0:15,0:15:39.08:0,39,829	0/0:27,0:27:78.22:0,78,1727	0/0:15,0:15:39.09:0,39,925	1/1:1,11:12:24.08:412,24,0	1/1:1,12:13:27.09:462,27,0	1/1:2,13:15:30.10:515,30,0	0/0:17,0:17:30.09:0,30,706	0/0:15,0:15:45.15:0,45,1044	0/0:25,0:25:67.72:0,68,1556	0/0:16,0:16:39.13:0,39,978	0/0:13,0:13:30.10:0,30,755	0/0:23,0:23:57.18:0,57,1365	0/0:19,0:19:45.15:0,45,1081	1/1:1,8:8:15.05:257,15,0	1/1:3,5:8:9.03:154,9,0	1/1:11,12:20:26.08:602,26,0	0/0:8,0:8:15:0,15,321	0/0:24,0:24:63.20:0,63,1420	0/0:24,0:24:63.16:0,63,1407	0/0:7,0:7:18.02:0,18,367
chr10	94090596	.	AGGGAGGAGAAGAAAGAAGAGGAG	A	5089.38	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=8.378;DP=363;FS=1.553;HRun=0;HaplotypeScore=189.8766;InbreedingCoeff=0.8757;MQ=64.57;MQ0=2;MQRankSum=-7.975;QD=68.78;ReadPosRankSum=3.054;VQSLOD=4.4779;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.27:0,78,7142	0/0:6,0:6:15.05:0,15,1572	0/0:23,0:20:31.71:0,32,1921	0/0:25,0:18:35.29:0,35,1973	0/0:11,0:11:33.11:0,33,2626	1/1:0,4:4:9.03:566,9,0	1/1:2,11:13:9.03:566,9,0	0/0:15,0:15:36.12:0,36,2479	0/0:12,0:12:33.11:0,33,3204	0/0:16,0:16:42.13:0,42,3578	0/0:14,0:14:33.11:0,33,2910	1/1:0,7:7:6.02:375,6,0	1/1:0,10:10:17.98:1132,18,0	1/1:1,13:14:27.09:1695,27,0	0/0:11,0:11:33.11:0,33,3236	0/0:13,0:13:36.12:0,36,3271	0/0:21,0:21:54.19:0,54,4881	0/0:11,0:11:33.05:0,33,2448	0/0:15,0:15:45.15:0,45,3252	0/0:10,0:10:30.10:0,30,2363	0/0:12,0:12:36.12:0,36,3167	1/1:0,5:5:3.01:189,3,0	1/1:1,3:4:6.02:377,6,0	1/1:2,15:17:3.01:189,3,0	0/0:9,0:9:24.08:0,24,1806	0/0:15,0:15:45.13:0,45,3349	0/0:15,0:15:45.15:0,45,3347	0/0:8,0:8:24.08:0,24,2596
chr10	94090807	.	G	GATTATTATT	8729.66	PASS	AB=0.733;AC=41;AF=0.932;AN=44;BaseQRankSum=-5.470;DP=251;FS=0.000;HRun=0;HaplotypeScore=70.4691;InbreedingCoeff=0.2873;MQ=68.26;MQ0=0;MQRankSum=-3.694;QD=41.57;ReadPosRankSum=-1.044;VQSLOD=4.0533;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:9:10.85:358,11,0	1/1:4,2:6:3.01:137,3,0	./.	./.	1/1:6,0:11:15.05:284,15,0	1/1:5,6:11:21.07:931,21,0	1/1:2,1:3:3.01:137,3,0	1/1:41,0:41:42.12:1347,42,0	1/1:4,2:6:9.03:386,9,0	1/1:3,0:10:20.01:418,20,0	1/1:4,0:9:17.98:303,18,0	1/1:1,0:1:3.01:97,3,0	./.	1/1:3,1:4:3.01:137,3,0	1/1:2,4:7:15.05:605,15,0	1/1:2,3:5:9.03:411,9,0	0/0:1,0:16:39.07:0,39,772	0/1:7,2:11:5.34:454,0,5	1/1:15,0:18:12.04:457,12,0	1/1:12,0:14:6.02:235,6,0	./.	./.	./.	1/1:5,1:6:6.02:126,6,0	1/1:3,4:8:21.07:832,21,0	1/1:5,3:8:9.03:253,9,0	1/1:10,5:15:11.18:547,11,0	1/1:4,3:7:6.02:274,6,0
chr10	94092686	.	T	TA	4022.73	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-13.221;DP=552;FS=6.101;HRun=9;HaplotypeScore=52.2948;InbreedingCoeff=0.9874;MQ=76.45;MQ0=0;MQRankSum=-1.120;QD=24.23;ReadPosRankSum=3.032;VQSLOD=4.5290;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,18:23:22.08:472,22,0	0/0:9,0:9:20.97:0,21,177	0/0:19,0:19:38.56:0,39,310	0/0:12,0:12:16:0,16,150	0/0:44,0:44:94.91:0,95,957	1/1:2,15:17:19.09:439,19,0	1/1:8,17:25:22.08:472,22,0	0/0:24,0:25:61.80:0,62,510	0/0:19,0:19:35.96:0,36,310	0/0:23,0:23:53.98:0,54,468	0/0:22,0:22:59.98:0,60,519	1/1:0,11:11:27.07:299,27,0	1/1:1,8:9:24.06:265,24,0	1/1:1,8:9:15.04:166,15,0	0/0:24,0:24:65.95:0,66,565	0/0:10,0:10:29.99:0,30,260	0/0:26,0:26:68.97:0,69,595	0/0:20,0:20:47.81:0,48,394	0/0:21,0:21:56.99:0,57,495	0/0:30,0:30:80.96:0,81,699	0/0:19,0:19:53.98:0,54,469	1/1:5,22:27:69.15:749,69,0	1/1:3,21:24:54.15:597,54,0	1/1:1,20:21:51.14:564,51,0	0/0:23,1:24:59.97:0,60,521	0/0:11,0:10:32.97:0,33,282	0/0:23,0:23:56.94:0,57,487	0/0:4,0:4:12:0,12,104
chr10	94093251	.	A	ACTT	10777.94	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-14.044;DP=627;FS=19.134;HRun=0;HaplotypeScore=81.8798;InbreedingCoeff=0.9986;MQ=85.88;MQ0=0;MQRankSum=-3.444;QD=53.89;ReadPosRankSum=3.583;VQSLOD=5.4239;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:34:78.22:1626,78,0	0/0:7,0:7:18.06:0,18,300	0/0:25,0:25:63.19:0,63,970	0/0:21,0:21:54.14:0,54,832	0/0:18,0:18:51.15:0,51,800	1/1:2,21:25:54.19:1210,54,0	1/1:0,21:22:60.21:1359,60,0	0/0:23,0:23:57.19:0,57,926	0/0:30,0:30:84.29:0,84,1395	0/0:30,0:30:84.29:0,84,1392	0/0:19,0:19:51.16:0,51,824	1/1:1,28:29:74.78:1668,75,0	1/1:1,11:12:33.11:747,33,0	1/1:1,12:14:33.11:717,33,0	0/0:18,0:18:51.17:0,51,850	0/0:15,0:15:45.15:0,45,741	0/0:43,0:43:99:0,129,2097	0/0:21,0:21:63.21:0,63,1039	0/0:18,0:18:54.16:0,54,834	0/0:27,0:27:75.14:0,75,1248	0/0:31,0:31:93.30:0,93,1512	1/1:1,18:19:51.17:1124,51,0	1/1:0,21:21:57.20:1288,57,0	1/1:4,18:23:48.12:1040,48,0	0/0:18,0:18:51.17:0,51,838	0/0:19,0:19:57.19:0,57,947	0/0:34,0:34:93.32:0,93,1549	0/0:10,0:10:30.07:0,30,464
chr10	94093618	.	T	TG	275.53	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=2.117;DP=538;FS=7.833;HRun=4;HaplotypeScore=61.0228;InbreedingCoeff=0.8387;MQ=46.61;MQ0=35;MQRankSum=1.707;QD=8.35;ReadPosRankSum=-0.619;VQSLOD=-0.2101;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,22:27:27.09:369,27,0	0/0:10,0:10:24.03:0,24,258	0/0:2,0:1:3.01:0,3,34	./.	0/0:17,0:17:36.10:0,36,408	0/0:28,0:23:63.16:0,63,705	0/0:22,0:19:33.09:0,33,374	0/0:27,0:14:30.06:0,30,328	0/0:10,0:10:27.08:0,27,306	0/0:23,0:22:48.13:0,48,543	0/0:14,0:14:36.10:0,36,408	0/0:15,0:14:33.09:0,33,374	0/0:14,0:12:27.07:0,27,306	0/0:24,0:21:51.13:0,51,567	0/0:14,0:13:33.09:0,33,374	0/0:10,0:10:30.05:0,30,327	0/0:24,0:22:57.16:0,57,646	0/0:18,0:16:33.57:0,34,376	0/0:23,0:12:33.09:0,33,374	0/0:14,0:13:36.10:0,36,408	0/0:50,0:45:99:0,114,1292	0/0:18,0:18:42.12:0,42,475	0/0:13,0:12:33.09:0,33,374	0/0:20,0:18:48.14:0,48,544	0/0:17,0:17:51.13:0,51,567	0/0:31,0:26:66.18:0,66,744	0/0:31,0:28:66.19:0,66,748	0/0:10,0:8:18.05:0,18,204
chr10	94093753	.	AAG	A	4048.90	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=10.930;DP=468;FS=10.994;HRun=0;HaplotypeScore=53.6640;InbreedingCoeff=0.9875;MQ=60.87;MQ0=5;MQRankSum=2.616;QD=31.15;ReadPosRankSum=2.603;VQSLOD=4.9759;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,29:35:75.21:1062,75,0	0/0:5,0:5:15.05:0,15,247	0/0:12,0:11:31.65:0,32,511	0/0:10,0:9:19.93:0,20,313	0/0:29,0:29:84.18:0,84,1369	1/1:4,17:20:45.15:651,45,0	1/1:0,8:8:24.08:348,24,0	0/0:29,0:26:69.15:0,69,1036	0/0:5,0:5:15.04:0,15,236	0/0:24,0:23:66.03:0,66,1093	0/0:28,0:28:73.23:0,73,1349	1/1:2,7:9:18.06:253,18,0	1/1:1,8:8:18.06:260,18,0	1/1:2,8:8:21.07:304,21,0	0/0:10,0:10:27.09:0,27,472	0/0:10,0:10:18.06:0,18,317	0/0:33,0:33:78.10:0,78,1353	0/0:15,0:15:45.15:0,45,789	0/0:15,0:14:42.10:0,42,609	0/0:20,0:20:58.82:0,59,938	0/0:8,0:8:24.08:0,24,415	1/1:1,13:13:30.10:433,30,0	1/1:0,15:14:33.11:477,33,0	1/1:1,8:8:18.06:260,18,0	0/0:23,0:23:66.14:0,66,1098	0/0:27,0:25:74.98:0,75,1217	0/0:24,0:23:69.15:0,69,1171	0/0:11,0:11:33.11:0,33,569
chr10	94094185	.	T	TTTTTTTC	5483.05	PASS	AB=0.800;AC=17;AF=0.304;AN=56;BaseQRankSum=-1.651;DP=363;FS=15.247;HRun=0;HaplotypeScore=77.4434;InbreedingCoeff=0.7935;MQ=82.73;MQ0=2;MQRankSum=-9.529;QD=48.52;ReadPosRankSum=1.966;VQSLOD=3.6750;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,25:29:36.12:1327,36,0	0/0:2,0:2:6.02:0,6,146	0/0:25,0:17:20.81:0,21,393	0/0:20,0:16:9.89:0,10,424	0/0:9,0:9:27.08:0,27,530	1/1:1,18:19:36.12:1311,36,0	0/1:9,3:12:86.75:437,0,87	0/0:23,0:23:66.19:0,66,1271	0/0:12,0:12:36.10:0,36,811	0/0:9,0:9:18.05:0,18,337	0/0:10,0:10:24.06:0,24,452	1/1:0,7:7:9.03:348,9,0	1/1:3,8:11:9.03:298,9,0	1/1:3,10:13:15.05:579,15,0	0/0:14,0:14:39.11:0,39,826	0/0:9,0:9:24.03:0,24,354	0/0:28,0:28:75.21:0,75,1672	0/0:13,0:13:6.35:0,6,549	0/0:15,0:15:45.13:0,45,756	0/0:9,0:9:27.09:0,27,615	0/0:14,0:14:39.11:0,39,848	1/1:0,1:1:3.01:116,3,0	1/1:0,5:5:12.51:462,13,0	1/1:5,9:13:21.07:607,21,0	0/0:8,0:8:24.07:0,24,524	0/0:13,0:13:39.12:0,39,766	0/0:15,0:15:39.12:0,39,823	0/0:2,0:2:3.90:0,4,75
chr10	94094316	.	G	GAT	1321.22	PASS	AB=1.000;AC=5;AF=0.104;AN=48;BaseQRankSum=-6.844;DP=174;FS=8.767;HRun=0;HaplotypeScore=35.2379;InbreedingCoeff=0.3248;MQ=86.63;MQ0=1;MQRankSum=-0.256;QD=24.02;ReadPosRankSum=-3.447;VQSLOD=1.8833;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:3.01:0,3,38	0/0:2,0:2:3.01:0,3,38	0/0:14,0:11:5.82:0,6,36	0/1:16,0:8:17.89:18,0,31	0/0:10,0:10:15.03:0,15,175	0/0:6,0:6:9.03:0,9,111	0/0:2,0:2:3.01:0,3,37	1/1:4,28:32:46.73:1271,47,0	0/0:4,0:4:9.03:0,9,113	0/0:1,0:1:3.01:0,3,38	0/0:2,0:2:6.02:0,6,75	0/0:2,0:2:3.01:0,3,38	0/0:4,0:4:6.02:0,6,75	./.	0/0:4,0:4:6.02:0,6,75	0/0:2,0:2:6.02:0,6,75	0/0:16,0:17:47.98:0,48,577	0/0:9,0:9:18.06:0,18,225	0/0:7,0:6:15.05:0,15,188	0/0:3,0:3:6.01:0,6,62	0/0:3,0:3:3.01:0,3,38	./.	./.	./.	0/0:5,0:5:12.04:0,12,150	0/0:8,0:8:21.05:0,21,241	0/0:4,0:4:12.04:0,12,150	1/1:4,3:7:9.03:148,9,0
chr10	94094474	.	G	GA	3112.15	PASS	AB=0.922;AC=35;AF=0.625;AN=56;BaseQRankSum=-11.106;DP=386;FS=5.596;HRun=12;HaplotypeScore=67.6934;InbreedingCoeff=0.5449;MQ=73.15;MQ0=3;MQRankSum=1.094;QD=11.24;ReadPosRankSum=-2.824;VQSLOD=2.5360;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:29:42.70:0,43,125	1/1:3,6:9:0.68:157,1,0	0/1:17,0:9:10.87:11,0,44	0/0:17,0:13:11.98:0,12,92	1/1:4,16:21:35.84:324,36,0	0/0:0,0:11:7.58:0,8,36	0/0:0,0:7:14.26:0,14,42	1/1:13,10:24:8.67:220,9,0	1/1:6,8:15:1.99:168,2,0	1/1:9,9:18:11.06:258,11,0	1/1:6,9:15:5.14:212,5,0	0/1:1,0:9:0.57:1,0,13	0/0:2,0:9:12.21:0,12,36	0/0:1,0:6:8.14:0,8,24	1/1:6,9:16:20.87:189,21,0	1/1:2,5:7:7.26:61,7,0	0/0:6,0:20:34.62:0,35,99	1/1:4,8:12:20.87:189,21,0	1/1:6,12:19:24.81:378,25,0	1/1:6,8:14:32.88:301,33,0	1/1:2,8:12:13.35:193,13,0	0/1:2,0:17:5.33:5,0,35	0/1:2,0:10:1.37:1,0,13	0/0:2,0:10:14.25:0,14,42	0/1:5,9:14:16.40:178,0,16	1/1:2,8:10:7.25:168,7,0	1/1:3,11:15:29.88:274,30,0	1/1:0,0:1:2.84:14,3,0
chr10	94095071	.	CT	C	5319.68	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.461;DP=526;FS=0.767;HRun=2;HaplotypeScore=64.6731;InbreedingCoeff=0.9964;MQ=95.58;MQ0=0;MQRankSum=-2.061;QD=38.27;ReadPosRankSum=3.098;VQSLOD=5.4807;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:87.29:1216,87,0	0/0:7,0:7:21.06:0,21,313	0/0:18,1:19:27.18:0,27,708	0/0:30,0:30:70.10:0,70,1108	0/0:21,0:21:63.20:0,63,963	1/1:0,22:22:60.20:839,60,0	1/1:0,9:9:15.05:210,15,0	0/0:17,0:17:48.16:0,48,748	0/0:24,0:24:72.23:0,72,1125	0/0:21,0:21:63.21:0,63,1007	0/0:22,0:22:66.23:0,66,1055	1/1:0,11:11:33.11:462,33,0	1/1:0,15:15:42.14:587,42,0	1/1:1,15:16:42.14:579,42,0	0/0:13,0:13:39.13:0,39,624	0/0:13,0:13:39.12:0,39,601	0/0:22,0:22:66.23:0,66,1055	0/0:20,0:20:54.18:0,54,860	0/0:24,0:24:69.22:0,69,1041	0/0:27,0:27:78.25:0,78,1224	0/0:21,0:21:63.21:0,63,1007	1/1:0,14:14:39.13:545,39,0	1/1:0,11:11:30.10:419,30,0	1/1:0,11:11:33.11:462,33,0	0/0:25,0:25:75.26:0,75,1190	0/0:23,0:23:69.24:0,69,1100	0/0:29,0:29:87.28:0,87,1363	0/0:9,0:9:27.09:0,27,416
chr10	94096215	.	G	GAA	4578.68	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=5.882;DP=449;FS=1.419;HRun=7;HaplotypeScore=60.6233;InbreedingCoeff=0.9701;MQ=77.21;MQ0=0;MQRankSum=-0.634;QD=34.95;ReadPosRankSum=1.769;VQSLOD=4.7049;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:25:57.19:936,57,0	0/0:7,0:7:18.05:0,18,210	0/0:8,0:8:21.03:0,21,219	0/0:11,0:11:11.20:0,11,155	0/0:22,0:22:66.18:0,66,759	1/1:0,20:20:54.18:886,54,0	1/1:5,8:13:18.06:295,18,0	0/0:32,0:32:78.18:0,78,886	0/0:19,0:19:48.14:0,48,559	0/0:33,0:33:96.24:0,96,1083	0/0:24,0:24:63.15:0,63,711	1/1:0,14:14:30.10:492,30,0	1/1:2,11:13:24.55:394,25,0	1/1:0,6:6:15.05:246,15,0	0/0:13,0:13:27.07:0,27,315	0/0:11,0:11:33.10:0,33,384	0/0:20,0:20:48.11:0,48,547	0/0:8,0:8:21.06:0,21,244	0/0:10,0:10:24.07:0,24,280	0/0:31,0:31:78.20:0,78,898	0/0:10,0:10:24.01:0,24,245	1/1:3,11:14:33.07:492,33,0	1/1:2,19:22:45.15:738,45,0	1/1:1,2:4:6.02:98,6,0	0/0:23,0:23:63.14:0,63,704	0/0:15,0:15:39.10:0,39,446	0/0:11,0:11:33.10:0,33,384	0/0:10,0:10:30.09:0,30,350
chr10	94097489	.	GTATA	G	1964.93	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=3.159;DP=693;FS=2.785;HRun=0;HaplotypeScore=187.3263;InbreedingCoeff=0.3768;MQ=55.30;MQ0=7;MQRankSum=2.712;QD=9.92;ReadPosRankSum=-4.042;VQSLOD=2.3294;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,6:24:33.91:302,34,0	0/0:13,0:13:39.07:0,39,770	0/0:22,0:13:29.10:0,29,315	0/0:25,0:8:18.01:0,18,188	0/0:33,0:33:93.12:0,93,1709	1/1:22,0:22:6.65:303,7,0	1/1:12,0:12:29.87:238,30,0	0/0:41,0:40:99:0,105,1340	0/0:25,0:25:72.11:0,72,1552	0/0:39,0:39:99:0,109,1880	0/0:28,0:28:84.05:0,84,1457	0/1:18,0:18:25.58:124,0,26	0/1:19,0:19:6.15:210,0,6	0/1:27,0:27:28.29:305,0,28	0/0:28,0:28:81.13:0,81,1544	0/0:21,0:21:63.09:0,63,1101	0/0:21,0:21:11.74:0,12,359	0/0:15,0:15:41.93:0,42,691	0/0:21,0:21:57.06:0,57,730	0/0:23,0:23:69.03:0,69,1085	0/0:24,0:24:66.02:0,66,1130	0/1:32,0:31:91.07:289,0,91	0/1:27,0:26:9.18:233,0,9	0/1:17,0:17:26.95:126,0,27	0/0:28,0:28:71.92:0,72,1327	0/0:32,0:32:84.17:0,84,1519	0/0:38,0:38:99:0,102,1699	0/0:18,0:18:54.04:0,54,875
chr10	94097669	.	C	CA	8655.70	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=17.402;DP=618;FS=9.476;HRun=1;HaplotypeScore=93.1472;InbreedingCoeff=0.9999;MQ=83.94;MQ0=0;MQRankSum=-3.158;QD=39.71;ReadPosRankSum=4.724;VQSLOD=4.7859;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:38:99:1516,102,0	0/0:15,0:15:45.12:0,45,555	0/0:21,0:21:53.98:0,54,573	0/0:20,0:20:55.63:0,56,629	0/0:20,0:20:54.13:0,54,653	1/1:0,25:25:60.20:897,60,0	1/1:0,20:20:57.19:853,57,0	0/0:29,0:28:72.21:0,72,897	0/0:21,0:21:57.19:0,57,739	0/0:32,0:32:90.14:0,90,1124	0/0:27,0:26:78.21:0,78,964	1/1:1,18:19:48.16:701,48,0	1/1:1,19:20:54.18:786,54,0	1/1:0,27:27:72.18:1050,72,0	0/0:18,0:18:54.17:0,54,688	0/0:16,0:16:48.16:0,48,622	0/0:22,0:22:66.17:0,66,822	0/0:14,0:13:36.12:0,36,464	0/0:19,0:19:54.11:0,54,621	0/0:28,0:28:78.17:0,78,926	0/0:20,0:20:57.09:0,57,655	1/1:4,28:32:93.28:1331,93,0	1/1:2,20:22:57.19:850,57,0	1/1:0,15:15:45.15:672,45,0	0/0:21,0:21:60.19:0,60,766	0/0:23,0:23:66.21:0,66,843	0/0:22,0:22:66.20:0,66,837	0/0:12,0:12:36.12:0,36,465
chr10	94097999	.	CTA	C	6571.66	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=19.376;DP=650;FS=3.066;HRun=0;HaplotypeScore=127.7655;InbreedingCoeff=0.9998;MQ=90.51;MQ0=0;MQRankSum=-10.401;QD=31.75;ReadPosRankSum=2.557;VQSLOD=7.1363;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:34:92.83:1030,93,0	0/0:12,0:12:36.11:0,36,695	0/0:26,0:26:78.23:0,78,1502	0/0:30,0:30:87.26:0,87,1637	0/0:26,0:26:78.25:0,78,1525	1/1:3,19:22:66.15:760,66,0	1/1:0,14:14:42.09:424,42,0	0/0:39,0:39:99:0,117,2356	0/0:19,0:19:57.16:0,57,1073	0/0:36,0:36:99:0,105,2125	0/0:24,0:24:72.25:0,72,1459	1/1:1,24:25:74.93:826,75,0	1/1:1,25:26:78.21:897,78,0	1/1:0,19:19:54.08:607,54,0	0/0:23,0:23:69.24:0,69,1402	0/0:23,0:23:69.24:0,69,1402	0/0:20,0:20:57.09:0,57,1116	0/0:17,0:17:51.18:0,51,1036	0/0:17,0:17:51.16:0,51,991	0/0:28,0:28:84.27:0,84,1671	0/0:27,0:27:81.28:0,81,1634	1/1:1,27:28:84.20:913,84,0	1/1:0,21:21:57.02:631,57,0	1/1:0,18:18:45.52:484,46,0	0/0:17,0:17:51.18:0,51,1035	0/0:21,0:21:63.21:0,63,1248	0/0:29,0:29:87.30:0,87,1740	0/0:9,0:9:27.09:0,27,548
chr10	94098002	.	CA	C	4123.48	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=19.587;DP=666;FS=0.987;HRun=3;HaplotypeScore=124.7802;InbreedingCoeff=0.9997;MQ=89.24;MQ0=0;MQRankSum=-8.829;QD=19.36;ReadPosRankSum=2.995;VQSLOD=3.3641;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:35:83.16:645,83,0	0/0:11,0:11:33.10:0,33,457	0/0:25,0:25:71.81:0,72,957	0/0:30,0:30:84.27:0,84,1178	0/0:27,0:27:81.27:0,81,1165	1/1:3,19:22:65.23:490,65,0	1/1:1,14:15:41.29:259,41,0	0/0:41,0:41:99:0,117,1630	0/0:17,0:17:51.17:0,51,734	0/0:37,0:37:99:0,111,1563	0/0:24,0:24:72.23:0,72,1017	1/1:3,24:27:77.32:577,77,0	1/1:2,25:27:78.36:596,78,0	1/1:2,18:20:37.92:344,38,0	0/0:24,0:24:72.23:0,72,1018	0/0:23,0:23:69.23:0,69,994	0/0:23,0:23:66.21:0,66,927	0/0:19,0:19:54.13:0,54,735	0/0:17,0:17:51.17:0,51,734	0/0:28,0:28:84.28:0,84,1209	0/0:29,0:29:87.27:0,87,1221	1/1:0,27:27:78.24:540,78,0	1/1:3,18:21:54.60:381,55,0	1/1:1,18:19:28.68:292,29,0	0/0:18,0:18:51.17:0,51,734	0/0:22,0:22:63.21:0,63,892	0/0:29,0:29:87.29:0,87,1253	0/0:9,0:9:27.09:0,27,389
chr10	94098429	.	T	TGATAAAC	5085.21	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=10.323;DP=562;FS=24.050;HRun=0;HaplotypeScore=143.2869;InbreedingCoeff=0.9357;MQ=79.60;MQ0=0;MQRankSum=-12.797;QD=42.38;ReadPosRankSum=-6.457;VQSLOD=1.6024;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:4,3:7:15.03:296,15,0	0/0:14,0:14:42.14:0,42,1152	0/0:21,0:18:45.14:0,45,1172	0/0:42,0:41:73.32:0,73,2148	0/0:19,0:19:57.18:0,57,1477	1/1:3,10:14:36.12:941,36,0	1/1:1,6:10:21.07:527,21,0	0/0:31,0:31:93.32:0,93,2530	0/0:20,0:21:63.20:0,63,1618	0/0:32,0:33:96.33:0,96,2625	0/0:23,0:23:66.20:0,66,1649	1/1:4,0:21:3.01:102,3,0	1/1:6,7:16:42.13:1194,42,0	1/1:3,0:13:12.04:294,12,0	0/0:25,0:25:69.20:0,69,1765	0/0:18,0:18:54.19:0,54,1463	0/0:17,0:17:51.18:0,51,1414	0/0:12,0:12:36.12:0,36,984	0/0:29,0:29:87.29:0,87,2258	0/0:30,0:30:87.28:0,87,2372	0/0:21,0:21:63.18:0,63,1584	1/1:7,9:18:39.60:923,40,0	1/1:5,6:14:31.34:684,31,0	1/1:1,0:7:3.01:125,3,0	0/0:17,0:17:51.18:0,51,1403	0/0:21,0:21:63.22:0,63,1761	0/0:39,0:39:99:0,114,2853	0/0:9,0:9:27.09:0,27,748
chr10	94098553	.	G	GT	7944.03	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-10.062;DP=661;FS=27.188;HRun=2;HaplotypeScore=60.5734;InbreedingCoeff=0.9986;MQ=83.02;MQ0=0;MQRankSum=-2.721;QD=35.46;ReadPosRankSum=2.819;VQSLOD=2.8984;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:78.26:1122,78,0	0/0:11,0:11:27.08:0,27,334	0/0:17,0:17:42.05:0,42,474	0/0:22,0:22:58.94:0,59,714	0/0:35,0:35:99:0,102,1263	1/1:1,23:24:57.19:819,57,0	1/1:0,22:22:51.17:734,51,0	0/0:27,0:27:75.21:0,75,896	0/0:24,0:24:72.23:0,72,892	0/0:34,0:34:99:0,99,1218	0/0:27,0:27:75.06:0,75,894	1/1:1,22:23:57.19:817,57,0	1/1:2,21:23:57.19:819,57,0	1/1:3,19:22:57.17:785,57,0	0/0:26,0:26:78.25:0,78,966	0/0:20,0:20:60.17:0,60,730	0/0:26,0:26:78.25:0,78,966	0/0:8,0:8:21.07:0,21,260	0/0:19,0:19:54.17:0,54,669	0/0:26,0:26:75.23:0,75,918	0/0:41,0:41:99:0,120,1433	1/1:0,29:29:84.28:1207,84,0	1/1:0,21:21:57.19:820,57,0	1/1:3,25:28:57.19:820,57,0	0/0:14,0:14:39.11:0,39,472	0/0:22,0:22:63.17:0,63,756	0/0:30,0:30:90.26:0,90,1088	0/0:8,0:8:21.07:0,21,260
chr10	94099285	.	T	TA	569.49	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=1.297;DP=500;FS=2.876;HRun=9;HaplotypeScore=68.9730;InbreedingCoeff=0.6920;MQ=84.29;MQ0=0;MQRankSum=-0.603;QD=15.82;ReadPosRankSum=0.608;VQSLOD=3.9445;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:60.16:664,60,0	0/0:10,0:10:29.99:0,30,260	0/0:24,1:25:35.75:0,36,290	0/0:10,0:10:8.96:0,9,153	0/0:30,0:30:80.97:0,81,703	0/0:22,0:22:62.99:0,63,547	0/0:16,0:16:35.92:0,36,298	0/0:25,0:25:53.97:0,54,469	0/0:21,0:20:56.99:0,57,495	0/0:34,0:34:89.96:0,90,780	0/0:21,0:21:56.98:0,57,495	0/0:13,0:13:32.99:0,33,286	0/0:14,0:14:38.99:0,39,338	0/0:10,0:10:29.99:0,30,260	0/0:9,0:9:20.97:0,21,179	0/1:9,0:9:3.52:4,0,130	0/0:15,0:16:34.94:0,35,284	0/0:7,0:7:21:0,21,182	0/0:17,0:18:47.02:0,47,397	0/0:30,0:30:83.97:0,84,726	0/0:9,0:9:26.98:0,27,232	0/0:20,0:20:50.99:0,51,443	0/0:20,0:20:47.99:0,48,417	0/0:13,0:13:38.99:0,39,339	0/0:12,0:12:32.98:0,33,283	0/0:19,0:19:53.98:0,54,466	0/0:21,0:21:56.96:0,57,491	0/0:19,0:19:56.97:0,57,489
chr10	94099687	.	C	CT	1717.75	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=9.536;DP=347;FS=2.394;HRun=5;HaplotypeScore=60.3387;InbreedingCoeff=0.9791;MQ=61.50;MQ0=1;MQRankSum=-1.881;QD=25.64;ReadPosRankSum=1.349;VQSLOD=3.2940;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:67.42:0,67,417	0/0:10,0:10:30.08:0,30,322	0/0:9,0:8:21.04:0,21,219	0/0:8,0:6:12.02:0,12,124	0/0:20,0:20:60.15:0,60,644	1/1:3,9:12:20.98:230,21,0	1/1:1,6:7:18.06:228,18,0	0/0:12,0:12:36.08:0,36,380	0/0:8,0:8:24.06:0,24,258	0/0:20,0:20:57.14:0,57,613	0/0:16,0:16:45.11:0,45,484	1/1:0,7:7:21.07:266,21,0	1/1:0,9:8:21.07:266,21,0	1/1:1,7:8:24.04:287,24,0	0/0:13,0:13:36.09:0,36,387	0/0:5,0:5:15.04:0,15,161	0/0:10,0:10:21.05:0,21,225	0/0:13,0:13:36.04:0,36,368	0/0:26,0:25:60.11:0,60,622	0/0:21,0:20:60.15:0,60,645	0/0:11,0:11:27.07:0,27,290	1/1:1,6:7:12.04:152,12,0	1/1:1,7:8:18.06:228,18,0	1/1:1,8:9:21.07:266,21,0	0/0:12,0:12:33.04:0,33,342	0/0:15,0:15:42.11:0,42,451	0/0:16,0:16:42.10:0,42,451	0/0:10,0:10:30.08:0,30,322
chr10	94099755	.	CA	C	4629.66	PASS	AB=0.750;AC=53;AF=0.946;AN=56;BaseQRankSum=-3.694;DP=191;FS=3.713;HRun=4;HaplotypeScore=33.4350;InbreedingCoeff=0.1163;MQ=72.66;MQ0=1;MQRankSum=-0.836;QD=26.16;ReadPosRankSum=3.136;VQSLOD=3.3136;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:14:27.08:322,27,0	1/1:1,4:5:12.04:144,12,0	0/1:10,5:12:59.38:142,0,59	0/0:12,2:6:0.61:0,1,129	1/1:3,15:17:36.11:432,36,0	1/1:0,7:6:9.03:107,9,0	1/1:0,5:3:9.03:108,9,0	1/1:1,11:12:30.02:329,30,0	1/1:0,7:7:21.06:252,21,0	1/1:0,4:4:12.04:144,12,0	1/1:0,13:13:27.08:324,27,0	1/1:0,1:1:3.01:36,3,0	1/1:0,3:2:3.01:36,3,0	1/1:0,2:2:6.02:70,6,0	1/1:0,7:7:21.06:252,21,0	1/1:0,4:4:12.04:144,12,0	1/1:1,4:5:12.04:144,12,0	1/1:0,2:2:6.02:72,6,0	1/1:0,2:2:6.02:72,6,0	1/1:0,5:4:12.04:144,12,0	1/1:0,5:5:15.05:180,15,0	1/1:0,2:2:6.01:64,6,0	1/1:0,1:1:3.01:35,3,0	1/1:1,2:3:2.34:35,2,0	1/1:1,10:11:24.07:287,24,0	1/1:0,8:8:24.07:288,24,0	1/1:0,10:10:27.08:324,27,0	1/1:0,5:5:12.04:144,12,0
chr10	94099767	.	C	CT	593.90	PASS	AB=1.000;AC=18;AF=0.333;AN=54;BaseQRankSum=6.736;DP=181;FS=22.324;HRun=0;HaplotypeScore=43.0691;InbreedingCoeff=0.6146;MQ=80.00;MQ0=0;MQRankSum=-4.418;QD=11.42;ReadPosRankSum=1.181;VQSLOD=1.4372;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:8:17.97:223,18,0	0/0:4,0:4:12.03:0,12,150	0/0:16,0:14:2.47:0,2,261	0/1:20,0:8:0.09:0,0,93	0/0:16,0:15:42.09:0,42,523	1/1:1,6:6:12.04:167,12,0	1/1:1,3:2:6.02:87,6,0	0/0:7,0:7:18.06:0,18,249	0/0:6,0:6:15.05:0,15,209	0/0:3,0:3:9.01:0,9,108	0/0:13,0:13:27.09:0,27,376	1/1:0,1:1:3.01:44,3,0	./.	1/1:0,2:2:6.02:86,6,0	0/0:8,0:8:21.03:0,21,242	0/0:4,0:4:12.03:0,12,151	0/0:6,0:6:18.01:0,18,209	0/1:3,0:3:29.16:29,0,53	0/0:1,0:1:3.01:0,3,42	0/0:4,0:4:12.04:0,12,167	0/0:5,0:5:15.04:0,15,192	1/1:1,1:2:3.01:37,3,0	1/1:1,1:1:3.01:43,3,0	1/1:0,2:2:3.01:44,3,0	0/0:10,0:10:24.02:0,24,275	0/0:7,0:7:21.07:0,21,292	0/0:12,0:12:36.10:0,36,475	0/0:4,0:4:12.04:0,12,167
chr10	94100922	.	TGC	T	65.84	PASS	AB=0.947;AC=4;AF=0.087;AN=46;BaseQRankSum=2.716;DP=733;FS=25.504;HRun=0;HaplotypeScore=122.3908;InbreedingCoeff=0.2506;MQ=52.34;MQ0=105;MQRankSum=2.958;QD=0.67;ReadPosRankSum=-2.994;VQSLOD=-0.3605;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:4:2.22:0,2,7	0/0:13,0:10:27.09:0,27,547	0/1:48,2:21:66.05:66,0,537	0/1:38,2:22:84.42:84,0,641	0/0:42,0:30:84.29:0,84,1702	./.	./.	0/0:48,0:30:84.29:0,84,1692	0/0:38,0:31:84.29:0,84,1695	0/0:57,0:45:99:0,129,2595	0/0:38,0:27:75.26:0,75,1510	./.	./.	./.	0/0:15,0:14:36.12:0,36,727	0/0:14,0:14:39.13:0,39,791	0/0:49,0:40:84.29:0,84,1696	0/0:19,0:16:42.14:0,42,801	0/0:41,0:26:69.24:0,69,1370	0/0:38,0:31:90.31:0,90,1819	0/0:38,0:37:93.27:0,93,1793	0/0:11,0:1:3.01:0,3,60	1/1:8,0:1:2.60:10,3,0	0/0:9,0:5:15.05:0,15,302	0/0:25,0:23:69.24:0,69,1398	0/0:64,0:52:99:0,144,2853	0/0:41,0:35:96.23:0,96,1938	0/0:20,0:9:27.09:0,27,546
chr10	94105812	.	TA	T	274.67	PASS	AC=12;AF=0.250;AN=48;BaseQRankSum=5.316;DP=505;FS=0.000;HRun=1;HaplotypeScore=38.3885;InbreedingCoeff=0.7735;MQ=39.45;MQ0=57;MQRankSum=-2.563;QD=9.47;ReadPosRankSum=-1.386;VQSLOD=0.4301;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:6:6.02:84,6,0	0/0:11,0:11:27.09:0,27,431	0/0:11,1:2:3.01:0,3,47	./.	0/0:31,0:26:54.18:0,54,858	./.	./.	0/0:35,0:6:18.06:0,18,288	0/0:33,0:28:30.10:0,30,479	0/0:49,0:36:99:0,102,1562	0/0:26,0:23:48.16:0,48,764	1/1:0,2:1:3.01:42,3,0	1/1:0,2:1:3.01:42,3,0	1/1:1,5:4:9.03:126,9,0	0/0:24,0:19:39.13:0,39,623	0/0:25,0:22:15.05:0,15,240	0/0:24,0:24:33.11:0,33,527	0/0:20,0:19:33.11:0,33,527	0/0:27,0:15:45.14:0,45,694	0/0:25,0:23:57.19:0,57,910	0/0:8,0:8:21.07:0,21,336	1/1:0,1:1:3.01:42,3,0	./.	1/1:0,7:2:6.02:84,6,0	0/0:27,0:25:63.21:0,63,1006	0/0:32,0:28:78.26:0,78,1222	0/0:34,0:24:42.06:0,42,669	0/0:12,0:12:24.08:0,24,384
chr10	94107407	.	TTCC	T	845.13	PASS	AC=14;AF=0.269;AN=52;BaseQRankSum=7.852;DP=362;FS=42.852;HRun=0;HaplotypeScore=52.3391;InbreedingCoeff=0.8592;MQ=44.68;MQ0=24;MQRankSum=-7.516;QD=16.57;ReadPosRankSum=-2.100;VQSLOD=1.1257;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:5,0:5:15.05:0,15,326	0/0:16,0:3:6.02:0,6,134	0/0:18,0:10:23.76:0,24,434	0/0:13,0:12:27.09:0,27,613	1/1:0,10:9:21.03:327,21,0	1/1:1,6:4:9.03:153,9,0	0/0:20,0:18:48.16:0,48,1051	0/0:11,0:11:21.07:0,21,483	0/0:22,0:19:54.19:0,54,1230	0/0:10,0:9:15.05:0,15,346	1/1:1,10:9:20.96:266,21,0	1/1:2,2:3:2.97:20,3,0	1/1:1,7:6:8.99:122,9,0	0/0:8,0:7:12.04:0,12,267	0/0:9,0:8:15.05:0,15,345	0/0:33,0:30:72.25:0,72,1648	0/0:15,0:15:36.12:0,36,821	0/0:18,0:11:33.09:0,33,715	0/0:13,0:13:36.11:0,36,785	0/0:38,0:33:81.28:0,81,1803	1/1:0,5:2:3.01:51,3,0	1/1:1,5:3:8.92:77,9,0	./.	0/0:10,0:10:24.08:0,24,544	0/0:12,0:7:21.06:0,21,420	0/0:20,0:20:48.15:0,48,1059	0/0:13,0:13:30.10:0,30,683
chr10	94107866	.	A	AAT	797.58	PASS	AB=1.000;AC=14;AF=0.280;AN=50;BaseQRankSum=6.002;DP=157;FS=9.736;HRun=0;HaplotypeScore=32.0274;InbreedingCoeff=0.5655;MQ=97.90;MQ0=0;MQRankSum=0.332;QD=19.45;ReadPosRankSum=0.041;VQSLOD=2.2749;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,2:3:9.03:142,9,0	0/0:4,0:4:12.04:0,12,165	0/1:10,0:9:15.83:16,0,36	0/1:11,0:9:15.17:15,0,37	0/0:5,0:5:15.05:0,15,206	1/1:1,4:5:12.04:213,12,0	./.	0/0:38,0:38:96.31:0,96,1292	0/0:3,0:3:6.02:0,6,82	0/0:4,0:4:12.03:0,12,152	0/0:3,0:3:9.03:0,9,122	1/1:0,1:1:3.01:53,3,0	1/1:0,6:7:21.07:358,21,0	1/1:0,2:2:6.02:106,6,0	0/0:1,0:1:3.01:0,3,41	0/0:3,0:3:9.03:0,9,124	0/0:11,0:11:33.10:0,33,436	0/0:12,0:12:27.09:0,27,371	0/0:7,0:7:21.07:0,21,289	0/0:3,0:3:9.03:0,9,124	0/0:3,0:3:9.03:0,9,124	./.	./.	1/1:1,1:2:3.01:53,3,0	0/0:4,0:4:12.04:0,12,165	0/0:5,0:5:12.04:0,12,165	0/0:2,0:2:6.02:0,6,82	0/0:8,0:8:24.08:0,24,330
chr10	94108752	.	A	AGTGT	2756.99	PASS	AB=1.000;AC=31;AF=0.620;AN=50;BaseQRankSum=-2.381;DP=513;FS=1.944;HRun=0;HaplotypeScore=121.6983;InbreedingCoeff=0.7075;MQ=66.39;MQ0=14;MQRankSum=-0.588;QD=9.57;ReadPosRankSum=-1.250;VQSLOD=2.8489;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:0.80:0,1,41	1/1:8,0:8:2.03:6,2,0	1/1:38,0:25:2.74:12,3,0	0/0:39,0:26:3.01:0,3,46	1/1:22,0:20:8.97:115,9,0	0/0:18,0:18:17.97:0,18,258	0/0:20,0:19:14.38:0,14,205	./.	1/1:8,0:15:0.47:1,0,0	1/1:23,0:23:34.18:452,34,0	1/1:21,0:21:21.07:346,21,0	0/0:9,0:10:8.94:0,9,128	0/0:14,0:14:7.15:0,7,209	0/0:7,0:10:20.58:0,21,236	1/1:20,0:18:18.06:289,18,0	1/1:19,0:18:6.02:101,6,0	./.	1/1:6,0:9:3.01:52,3,0	1/1:10,0:9:5.85:55,6,0	1/1:18,0:18:14.94:198,15,0	./.	0/0:11,0:13:15.03:0,15,181	0/0:15,0:16:29.76:0,30,410	0/1:13,0:16:0.29:0,0,0	1/1:17,0:15:15.05:247,15,0	1/1:18,0:18:28.87:445,29,0	1/1:21,0:21:29.65:438,30,0	1/1:4,8:13:9.03:173,9,0
chr10	94108764	.	T	TGTGTGC	1729.12	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=5.138;DP=522;FS=38.975;HRun=0;HaplotypeScore=140.8644;InbreedingCoeff=-0.1551;MQ=55.73;MQ0=20;MQRankSum=0.216;QD=8.12;ReadPosRankSum=6.621;VQSLOD=0.7653;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:26.94:0,27,273	0/0:7,0:7:2.70:0,3,24	0/0:29,0:17:26.43:0,26,212	0/0:29,0:16:32.61:0,33,343	0/1:25,0:23:59.95:77,0,60	0/0:24,0:24:35.81:0,36,529	0/0:20,0:19:32.01:0,32,452	0/0:16,0:16:35.35:0,35,295	0/0:15,0:14:7.69:0,8,54	0/1:21,0:21:99:210,0,120	0/1:21,0:21:39.84:270,0,40	0/0:13,0:13:12.03:0,12,215	0/0:13,0:12:31.39:0,31,455	0/0:17,0:15:22.70:0,23,411	0/1:18,0:16:2.89:267,0,3	0/1:15,0:14:75.16:75,0,141	1/1:4,13:16:1.55:4,2,0	0/1:9,0:8:30.94:47,0,31	0/0:11,0:9:23.89:0,24,190	0/1:16,0:16:83.03:93,0,83	0/0:24,0:20:26.65:0,27,210	0/0:24,0:24:20.49:0,20,352	0/0:23,0:21:38.76:0,39,696	0/0:17,0:16:5.97:0,6,47	0/1:17,0:15:64.95:214,0,65	0/1:19,0:18:62.16:210,0,62	0/1:21,0:21:50.73:319,0,51	0/1:14,0:13:32.89:90,0,33
chr10	94108786	.	T	TGAGAGAGA	2673.89	PASS	AB=0.924;AC=40;AF=0.800;AN=50;BaseQRankSum=-0.342;DP=438;FS=5.895;HRun=0;HaplotypeScore=143.9288;InbreedingCoeff=0.3280;MQ=42.42;MQ0=20;MQRankSum=0.489;QD=7.39;ReadPosRankSum=-0.840;VQSLOD=1.6814;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:3.01:0,3,49	1/1:9,0:9:3.86:77,4,0	./.	./.	1/1:30,0:26:3.47:26,3,0	1/1:19,0:19:15.44:210,15,0	1/1:17,0:15:2.30:4,2,0	0/0:9,0:9:5.96:0,6,45	0/1:12,0:11:0.92:95,0,1	1/1:19,0:19:20.71:429,21,0	0/1:13,0:23:0:1,0,0	1/1:10,0:10:8.75:124,9,0	1/1:11,0:9:3.15:12,3,0	1/1:18,0:16:6.70:50,7,0	./.	1/1:13,0:12:6.01:101,6,0	0/1:12,0:11:27.27:46,0,27	1/1:7,0:6:5.98:55,6,0	1/1:8,0:4:3.01:44,3,0	1/1:13,0:13:9.03:232,9,0	1/1:18,0:13:9:153,9,0	1/1:24,0:24:2.68:18,3,0	1/1:25,0:23:9.13:37,9,0	0/1:15,0:13:0.01:0,0,0	1/1:19,0:17:9.03:230,9,0	1/1:15,5:21:27.08:692,27,0	1/1:14,0:18:7.84:159,8,0	0/0:12,0:11:4.12:0,4,82
chr10	94108821	.	GGC	G	523.12	PASS	AB=0.890;AC=17;AF=0.304;AN=56;BaseQRankSum=5.141;DP=474;FS=3.308;HRun=0;HaplotypeScore=98.4318;InbreedingCoeff=-0.0356;MQ=62.41;MQ0=16;MQRankSum=-4.910;QD=2.29;ReadPosRankSum=-1.173;VQSLOD=1.9948;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:3.01:39,3,0	0/1:6,2:8:13.20:13,0,52	0/0:25,0:18:45.42:0,45,653	0/0:33,0:16:43.88:0,44,507	0/0:24,8:28:45.46:0,45,725	0/1:16,2:18:9.63:123,0,10	0/1:10,2:11:8.76:112,0,9	0/0:31,0:31:83.80:0,84,1274	0/0:11,0:10:11.40:0,11,272	0/1:22,1:23:17.18:17,0,836	0/0:12,0:12:8.77:0,9,113	0/1:9,1:10:0.77:35,0,1	0/1:9,0:7:9.38:16,0,9	0/1:8,5:12:9.57:100,0,10	0/0:14,1:14:14.97:0,15,214	0/0:11,0:10:23.82:0,24,347	0/1:15,1:14:9.89:10,0,331	0/0:6,0:5:11.47:0,11,155	0/1:11,2:10:14.29:14,0,346	0/1:16,2:18:1.63:2,0,499	0/0:21,0:18:42.13:0,42,717	0/1:19,4:23:23.95:24,0,61	1/1:15,7:20:11.05:128,11,0	0/0:14,1:12:2.59:0,3,12	0/0:12,3:12:30.10:0,30,511	0/0:19,0:18:23.65:0,24,621	0/1:10,2:12:9.59:10,0,332	0/1:8,0:7:37.86:38,0,111
chr10	94108823	.	C	CAGAGAG	1255.78	PASS	AB=0.821;AC=16;AF=0.286;AN=56;BaseQRankSum=6.220;DP=486;FS=10.497;HRun=0;HaplotypeScore=120.5040;InbreedingCoeff=0.6265;MQ=62.28;MQ0=13;MQRankSum=-5.232;QD=8.54;ReadPosRankSum=-1.261;VQSLOD=1.5235;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:3.01:0,3,36	0/0:8,0:8:2.09:0,2,18	0/0:25,0:18:46.51:0,47,895	0/0:33,0:16:39.62:0,40,566	0/0:30,0:26:47.91:0,48,1018	1/1:4,14:18:15.91:444,16,0	1/1:11,1:12:9.03:148,9,0	0/0:31,0:31:69.24:0,69,1481	0/0:11,0:10:17.51:0,18,268	0/0:22,0:22:2.04:0,2,737	0/0:12,0:12:1.93:0,2,110	1/1:4,8:13:8.93:238,9,0	1/1:3,6:8:6.02:89,6,0	1/1:10,3:13:8.90:191,9,0	0/0:15,0:14:12.04:0,12,262	0/0:12,0:11:23.91:0,24,417	0/0:17,0:15:29.07:0,29,522	0/0:6,0:5:11.41:0,11,199	0/0:15,0:12:18.06:0,18,385	0/0:19,0:19:33.72:0,34,537	0/0:22,0:19:40.83:0,41,801	1/1:12,11:23:2.47:13,2,0	1/1:19,1:19:8.92:277,9,0	0/1:8,9:16:0.01:0,0,0	0/0:15,0:12:29.48:0,29,498	0/1:18,0:18:24.02:24,0,597	0/0:15,0:15:4.09:0,4,387	0/0:8,0:7:8.34:0,8,195
chr10	94109634	.	CTGTGTGTGTGTGTG	C	1910.08	PASS	AB=0.900;AC=15;AF=0.288;AN=52;BaseQRankSum=7.433;DP=509;FS=7.405;HRun=0;HaplotypeScore=180.4595;InbreedingCoeff=0.6675;MQ=68.52;MQ0=9;MQRankSum=-5.576;QD=14.47;ReadPosRankSum=-0.751;VQSLOD=1.9829;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:2.92:0,3,212	./.	./.	0/0:37,0:22:6.02:0,6,91	1/1:9,4:13:3.79:56,4,0	0/0:20,0:20:24.08:0,24,1168	0/0:21,0:21:21.54:0,22,869	0/0:17,0:17:7.27:0,7,114	1/1:14,0:21:12.04:190,12,0	1/1:8,2:10:6.01:150,6,0	1/1:6,1:8:3.01:37,3,0	0/0:21,0:23:33.11:0,33,1526	0/0:10,0:12:15.52:0,16,776	0/0:18,0:17:24.08:0,24,1336	1/1:19,5:24:15.05:519,15,0	1/1:11,9:23:24.08:751,24,0	0/1:16,0:18:65.70:186,0,66	0/0:11,0:11:3.90:0,4,185	0/0:16,0:16:10.59:0,11,319	0/0:24,0:26:33.11:0,33,1400	0/0:25,0:24:36.12:0,36,1593	0/0:19,0:19:21.07:0,21,1194	0/0:15,0:16:24.08:0,24,1070	0/0:12,0:12:9.03:0,9,589	1/1:9,3:13:5.74:188,6,0	0/0:20,0:20:18.02:0,18,523	0/0:16,0:18:18.06:0,18,688	0/0:7,0:7:6.02:0,6,167
chr10	94110357	.	TG	T	1399.20	PASS	AB=0.937;AC=14;AF=0.250;AN=56;BaseQRankSum=11.383;DP=721;FS=5.833;HRun=2;HaplotypeScore=122.2383;InbreedingCoeff=0.7213;MQ=52.45;MQ0=33;MQRankSum=-5.986;QD=7.07;ReadPosRankSum=1.108;VQSLOD=0.8741;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:35,2:34:48.99:49,0,451	0/0:5,0:4:12.04:0,12,170	0/0:68,0:17:27.86:0,28,338	0/0:75,1:13:21.76:0,22,263	0/0:22,0:22:53.39:0,53,737	1/1:18,1:19:26.03:251,26,0	0/1:21,1:22:0.72:81,0,1	0/0:21,0:21:33.96:0,34,702	0/0:28,0:27:72.28:0,72,992	0/0:19,0:19:52.59:0,53,673	0/0:20,0:20:56.08:0,56,753	1/1:8,0:8:12.91:141,13,0	1/1:16,0:16:25.36:263,25,0	0/1:18,2:17:8.80:199,0,9	0/0:22,0:21:57.18:0,57,805	0/0:22,0:22:61.63:0,62,812	0/0:32,1:33:93.95:0,94,1256	0/0:18,3:20:25.89:0,26,573	0/0:18,0:18:49.18:0,49,606	0/0:27,0:27:67.66:0,68,919	0/0:45,0:45:99:0,126,1688	1/1:20,1:20:28.13:280,28,0	1/1:22,4:26:25.33:276,25,0	0/1:27,2:27:0.28:42,0,0	0/0:17,1:18:48.15:0,48,675	0/0:19,0:18:48.78:0,49,584	0/0:19,0:18:48.09:0,48,701	0/0:17,0:17:46.33:0,46,599
chr10	94110358	.	G	GT	2382.93	PASS	AB=0.881;AC=16;AF=0.286;AN=56;BaseQRankSum=11.200;DP=729;FS=10.581;HRun=1;HaplotypeScore=121.2040;InbreedingCoeff=0.7970;MQ=53.14;MQ0=34;MQRankSum=-6.849;QD=12.10;ReadPosRankSum=1.244;VQSLOD=1.3724;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:34,2:33:94.64:95,0,369	0/0:5,0:4:12.04:0,12,164	0/0:71,0:17:27.47:0,27,339	0/0:79,0:15:21.43:0,21,264	0/0:21,0:21:54.14:0,54,717	1/1:8,11:19:20.70:378,21,0	0/1:16,5:22:1.44:203,0,1	0/0:21,1:22:15.49:0,15,697	0/0:28,0:27:74.44:0,74,985	0/0:19,0:19:54.05:0,54,673	0/0:20,0:20:57.12:0,57,744	1/1:6,3:9:11.94:195,12,0	1/1:5,11:16:26.96:415,27,0	1/1:7,13:17:8.16:413,8,0	0/0:21,0:20:57.18:0,57,770	0/0:23,0:23:63.14:0,63,816	0/0:35,0:34:96.21:0,96,1247	0/0:21,0:20:21.83:0,22,594	0/0:21,0:21:52.91:0,53,630	0/0:28,0:28:68.45:0,68,902	0/0:44,1:45:99:0,126,1650	1/1:13,7:20:29.93:349,30,0	1/1:16,9:26:26.21:409,26,0	1/1:22,6:26:1.40:115,1,0	0/0:18,0:18:48.15:0,48,644	0/0:19,0:18:51.05:0,51,608	0/0:19,0:18:56.32:0,56,700	0/0:17,0:17:49.87:0,50,604
chr10	94110360	.	T	TGTG	3129.66	PASS	AB=0.986;AC=18;AF=0.321;AN=56;BaseQRankSum=10.960;DP=735;FS=2.052;HRun=0;HaplotypeScore=140.4825;InbreedingCoeff=0.8432;MQ=52.98;MQ0=35;MQRankSum=-7.716;QD=11.51;ReadPosRankSum=-1.385;VQSLOD=3.3020;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:33:56.05:56,0,516	0/0:5,0:4:12.04:0,12,188	0/1:71,0:17:2.91:3,0,385	0/0:81,0:15:30.05:0,30,412	0/0:21,0:21:54.18:0,54,887	1/1:11,8:20:36.23:492,36,0	1/1:18,2:23:12.66:314,13,0	0/0:22,0:22:63.17:0,63,938	0/0:28,0:27:76.11:0,76,1174	0/0:18,0:18:54.18:0,54,861	0/0:20,0:20:57.19:0,57,949	1/1:6,2:9:11.76:208,12,0	1/1:7,6:16:30.83:528,31,0	1/1:7,10:17:15.94:642,16,0	0/0:21,0:20:51.17:0,51,849	0/0:24,0:24:63.21:0,63,1017	0/0:35,0:34:96.28:0,96,1510	0/0:21,0:20:54.18:0,54,837	0/0:20,0:20:60.14:0,60,859	0/0:27,0:27:65.86:0,66,1079	0/0:46,0:46:99:0,129,2013	1/1:13,5:18:20.32:341,20,0	1/1:18,5:27:22.77:504,23,0	1/1:26,3:28:18.69:246,19,0	0/0:18,0:18:48.16:0,48,767	0/0:17,0:16:45.15:0,45,712	0/0:22,0:21:59.99:0,60,894	0/0:17,0:17:45.08:0,45,705
chr10	94110544	.	A	AG	5950.49	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.638;DP=605;FS=2.643;HRun=1;HaplotypeScore=66.2242;InbreedingCoeff=0.9994;MQ=77.55;MQ0=0;MQRankSum=-1.542;QD=41.61;ReadPosRankSum=0.558;VQSLOD=5.2651;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.24:0,81,1106	0/0:8,0:8:24.07:0,24,319	0/0:19,0:19:51.08:0,51,666	0/0:15,1:14:27.34:0,27,375	0/0:22,0:22:60.20:0,60,839	1/1:0,21:21:63.15:976,63,0	1/1:1,18:19:51.11:776,51,0	0/0:26,0:26:72.24:0,72,1007	0/0:23,0:23:69.22:0,69,948	0/0:36,0:36:99:0,108,1496	0/0:27,0:27:81.27:0,81,1132	1/1:0,12:12:36.12:575,36,0	1/1:0,10:11:30.03:443,30,0	1/1:1,17:17:45.09:688,45,0	0/0:21,0:21:63.21:0,63,881	0/0:23,0:23:69.20:0,69,929	0/0:15,0:15:42.14:0,42,587	0/0:17,0:17:48.16:0,48,671	0/0:26,0:25:66.21:0,66,903	0/0:32,0:32:96.30:0,96,1324	0/0:30,0:30:87.29:0,87,1217	1/1:0,19:19:51.17:815,51,0	1/1:0,22:22:50.92:814,51,0	1/1:0,21:21:54.18:863,54,0	0/0:24,0:24:72.23:0,72,990	0/0:20,0:20:57.19:0,57,797	0/0:31,0:31:93.29:0,93,1282	0/0:19,0:19:45.15:0,45,626
chr10	94110947	.	TC	T	6086.68	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.033;DP=591;FS=0.694;HRun=2;HaplotypeScore=61.4934;InbreedingCoeff=0.9998;MQ=93.30;MQ0=0;MQRankSum=-5.740;QD=36.23;ReadPosRankSum=3.373;VQSLOD=5.4193;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:26:75.23:916,75,0	0/0:10,0:10:30.10:0,30,446	0/0:30,0:30:90.30:0,90,1331	0/0:22,0:22:57.17:0,57,826	0/0:20,0:20:60.20:0,60,895	1/1:0,28:28:72.23:935,72,0	1/1:0,11:11:33.11:428,33,0	0/0:31,0:31:90.28:0,90,1280	0/0:26,0:26:78.26:0,78,1169	0/0:34,0:34:96.31:0,96,1419	0/0:27,0:27:81.27:0,81,1214	1/1:0,15:15:45.15:584,45,0	1/1:0,13:13:36.12:467,36,0	1/1:1,15:16:39.13:506,39,0	0/0:21,0:21:63.21:0,63,934	0/0:16,0:16:48.15:0,48,690	0/0:15,0:15:45.14:0,45,655	0/0:20,0:20:60.18:0,60,862	0/0:29,0:29:87.22:0,87,1191	0/0:23,0:23:69.19:0,69,1009	0/0:14,0:14:42.14:0,42,626	1/1:0,23:23:69.22:891,69,0	1/1:0,20:20:57.18:736,57,0	1/1:0,16:16:48.16:623,48,0	0/0:15,0:15:45.15:0,45,674	0/0:34,0:34:99:0,102,1490	0/0:25,0:25:75.24:0,75,1086	0/0:11,0:11:29.95:0,30,449
chr10	94111094	.	G	GA	1019.38	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.830;DP=620;FS=3.351;HRun=6;HaplotypeScore=74.4444;InbreedingCoeff=0.8867;MQ=75.05;MQ0=0;MQRankSum=-4.067;QD=28.32;ReadPosRankSum=-0.319;VQSLOD=4.0773;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,35:36:90.25:1114,90,0	0/0:9,0:9:24.05:0,24,244	0/0:19,0:18:8.60:0,9,271	0/0:11,0:11:12.02:0,12,122	0/0:24,0:24:63.11:0,63,635	0/0:20,0:20:60.14:0,60,612	0/0:18,0:18:45.09:0,45,453	0/0:35,0:35:93.21:0,93,949	0/0:24,0:24:66.12:0,66,660	0/0:39,0:39:99:0,105,1063	0/0:28,0:28:78.18:0,78,796	0/0:19,0:19:54.12:0,54,550	0/0:22,0:22:60.13:0,60,611	0/0:18,0:18:54.12:0,54,551	0/0:23,0:23:68.88:0,69,678	0/0:12,0:12:33.07:0,33,337	0/0:22,0:22:63.12:0,63,635	0/0:19,0:19:57.05:0,57,556	0/0:21,0:21:57.13:0,57,581	0/0:23,0:23:63.14:0,63,642	0/0:31,0:31:90.19:0,90,910	0/0:29,0:29:81.17:0,81,819	0/0:25,0:25:69.15:0,69,704	0/0:27,0:27:78.12:0,78,777	0/0:17,0:17:45.10:0,45,458	0/0:25,0:25:69.16:0,69,704	0/0:18,0:18:48.11:0,48,490	0/0:6,0:6:12.03:0,12,122
chr10	94111578	.	TACACACACAC	T	1159.18	PASS	AC=18;AF=0.346;AN=52;BaseQRankSum=3.243;DP=403;FS=19.629;HRun=0;HaplotypeScore=119.5238;InbreedingCoeff=0.6864;MQ=66.58;MQ0=7;MQRankSum=-5.500;QD=11.04;ReadPosRankSum=0.005;VQSLOD=1.1198;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:24.07:0,24,419	0/0:2,0:6:12.04:0,12,354	./.	./.	0/0:5,0:6:3.01:0,3,91	1/1:8,6:14:6.02:177,6,0	1/1:9,6:15:0.56:84,1,0	0/0:27,0:27:5.95:0,6,42	0/0:10,0:10:6.02:0,6,186	0/0:12,0:11:9.03:0,9,238	0/0:7,0:12:18.06:0,18,517	1/1:7,2:10:6.02:158,6,0	1/1:11,0:11:6.02:124,6,0	1/1:4,5:9:9.03:265,9,0	0/0:8,0:10:6.02:0,6,157	0/0:10,0:12:18.06:0,18,528	0/0:18,0:18:27.08:0,27,979	0/0:17,0:17:18.92:0,19,333	0/0:12,0:12:6.49:0,6,115	0/0:9,0:10:11.92:0,12,152	0/0:17,0:18:18.06:0,18,390	1/1:10,3:14:12.04:335,12,0	1/1:11,4:15:0.94:2,1,0	1/1:10,1:11:3.01:88,3,0	0/0:10,0:14:9.03:0,9,231	0/0:16,0:21:29.69:0,30,450	0/0:13,0:18:12.04:0,12,202	1/1:3,0:4:9.02:89,9,0
chr10	94112943	.	TTG	T	455.86	PASS	AB=0.879;AC=18;AF=0.346;AN=52;BaseQRankSum=-3.876;DP=617;FS=0.933;HRun=0;HaplotypeScore=101.5341;InbreedingCoeff=0.6055;MQ=65.91;MQ0=11;MQRankSum=1.850;QD=2.20;ReadPosRankSum=1.175;VQSLOD=1.9231;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:14.94:0,15,122	1/1:5,2:7:3.01:32,3,0	./.	./.	1/1:21,6:27:9.02:97,9,0	0/0:22,0:21:8.98:0,9,74	0/0:21,0:20:8.76:0,9,94	0/0:28,0:28:13.91:0,14,87	1/1:14,2:16:6.01:64,6,0	1/1:19,0:19:8.07:69,8,0	1/1:27,1:28:6.01:62,6,0	0/0:13,0:13:4.22:0,4,24	0/0:20,0:20:5.90:0,6,41	0/0:11,0:10:5.96:0,6,43	1/1:13,7:20:3.01:32,3,0	1/1:13,4:17:6.02:64,6,0	0/0:22,0:28:18.01:0,18,173	0/1:15,6:21:9.07:96,0,9	0/0:23,0:23:17.88:0,18,135	0/0:26,0:25:11.60:0,12,120	0/0:31,0:30:23.96:0,24,207	0/0:21,0:21:2.84:0,3,25	0/0:16,0:16:5.95:0,6,42	0/1:23,0:31:0:0,0,1	1/1:16,0:19:11.85:103,12,0	0/0:28,0:29:26.39:0,26,239	0/0:11,0:18:12.88:0,13,106	0/0:7,0:14:5.98:0,6,48
chr10	94113282	.	CTGTT	C	788.44	PASS	AB=0.994;AC=11;AF=0.196;AN=56;BaseQRankSum=9.879;DP=430;FS=5.602;HRun=0;HaplotypeScore=88.8295;InbreedingCoeff=0.0321;MQ=67.20;MQ0=2;MQRankSum=-3.537;QD=6.06;ReadPosRankSum=6.314;VQSLOD=0.9794;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:17:19.41:337,19,0	0/0:5,0:5:14.91:0,15,158	0/1:17,1:15:5.82:6,0,438	0/0:10,0:7:20.88:0,21,348	0/0:29,0:28:72.50:0,73,1121	0/1:15,0:15:36.30:36,0,129	0/1:9,0:9:11.03:65,0,11	0/0:20,0:19:52.14:0,52,744	0/0:15,0:15:35.97:0,36,528	0/0:21,0:21:59.91:0,60,941	0/0:21,0:21:63.04:0,63,998	0/1:12,0:12:21.55:91,0,22	0/1:12,0:12:80.78:81,0,83	0/1:10,0:10:33.19:71,0,33	0/0:11,0:11:20.98:0,21,307	0/0:5,0:5:15.01:0,15,197	0/0:14,0:15:32.68:0,33,472	0/0:12,0:12:23.87:0,24,292	0/0:23,0:23:66.13:0,66,1059	0/0:27,0:26:78.07:0,78,1203	0/0:13,0:12:33.58:0,34,425	0/1:14,0:14:61.80:89,0,62	0/1:17,0:17:88.85:120,0,89	0/1:6,0:6:6.62:44,0,7	0/0:20,0:20:60.10:0,60,1029	0/0:19,0:19:47.66:0,48,771	0/0:23,0:23:51.04:0,51,798	0/0:10,0:10:27.05:0,27,459
chr10	94113284	.	GTTTT	G	1719.23	PASS	AB=0.793;AC=16;AF=0.286;AN=56;BaseQRankSum=10.151;DP=492;FS=9.201;HRun=17;HaplotypeScore=94.0710;InbreedingCoeff=0.8001;MQ=66.11;MQ0=4;MQRankSum=-5.343;QD=14.82;ReadPosRankSum=7.347;VQSLOD=-0.0588;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:4.93:152,0,5	0/0:2,0:7:12.04:0,12,219	0/0:19,0:15:31.49:0,31,400	0/0:13,0:7:15.05:0,15,265	0/0:17,0:35:74.13:0,74,1148	1/1:6,9:15:14.58:190,15,0	1/1:2,5:8:13.15:155,13,0	0/0:21,0:20:40.38:0,40,726	0/0:15,0:23:36.12:0,36,618	0/0:14,0:25:51.15:0,51,912	0/0:16,0:34:82.77:0,83,1230	1/1:4,10:15:23.87:272,24,0	1/1:5,7:12:17.83:226,18,0	1/1:4,5:11:14.75:191,15,0	0/0:8,0:13:12.04:0,12,244	0/0:5,0:6:9.03:0,9,165	0/0:4,0:16:35.95:0,36,447	0/0:4,0:12:9.03:0,9,166	0/0:22,0:23:54.16:0,54,1019	0/0:22,0:26:66.14:0,66,1160	0/0:9,0:12:14.64:0,15,338	1/1:5,11:16:23.56:303,24,0	0/1:5,9:17:15.81:273,0,16	1/1:1,4:6:13.19:155,13,0	0/0:19,0:22:48.13:0,48,946	0/0:11,0:20:41.72:0,42,770	0/0:17,0:33:48.16:0,48,855	0/0:10,0:10:21.07:0,21,384
chr10	94113646	.	AT	A	2317.13	PASS	AB=0.832;AC=20;AF=0.357;AN=56;BaseQRankSum=12.480;DP=547;FS=10.053;HRun=13;HaplotypeScore=71.3709;InbreedingCoeff=0.7240;MQ=77.51;MQ0=0;MQRankSum=-0.257;QD=10.07;ReadPosRankSum=2.422;VQSLOD=2.4207;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:18:23.28:68,23,0	0/0:7,0:7:17.70:0,18,157	0/1:17,2:17:25.75:26,0,97	0/1:19,1:15:13.28:13,0,63	0/0:23,1:27:15.99:0,16,452	1/1:2,17:19:47.72:350,48,0	1/1:7,21:30:60.71:428,61,0	0/0:23,2:25:10.25:0,10,415	0/0:15,0:15:11.99:0,12,265	0/0:33,1:34:53.20:0,53,671	0/0:29,0:29:37.82:0,38,507	1/1:0,13:13:35.80:262,36,0	1/1:2,19:21:50.68:372,51,0	1/1:0,16:16:41.76:306,42,0	0/0:9,0:12:26.70:0,27,228	0/0:20,0:21:59.93:0,60,568	0/0:27,0:27:60.08:0,60,577	0/0:10,0:10:24.04:0,24,233	0/0:10,0:11:23.83:0,24,208	0/0:32,2:35:52.15:0,52,808	0/0:17,0:20:30.69:0,31,400	1/1:3,16:20:17.61:283,18,0	1/1:2,14:16:35.62:262,36,0	0/1:4,13:18:2.34:148,0,2	0/0:10,0:10:21.03:0,21,204	0/1:17,2:20:4.92:5,0,267	0/0:21,0:20:51:0,51,466	0/0:13,0:13:36.06:0,36,350
chr10	94115296	.	AAGATCTTTTTCCATTCTGTAGGCTGCCAT	A	13843.88	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.257;DP=491;FS=1.685;HRun=0;HaplotypeScore=348.3150;InbreedingCoeff=0.9589;MQ=53.13;MQ0=2;MQRankSum=-11.388;QD=203.59;ReadPosRankSum=5.752;VQSLOD=4.1236;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.21:0,60,5544	0/0:11,0:11:33.11:0,33,3833	0/0:21,0:11:30.10:0,30,2074	0/0:27,0:23:69.23:0,69,4436	0/0:21,0:21:63.22:0,63,6456	1/1:0,13:13:39.13:3020,39,0	1/1:0,5:5:12.04:950,12,0	0/0:27,0:27:78.26:0,78,6067	0/0:23,0:23:69.24:0,69,8541	0/0:17,0:17:51.18:0,51,5735	0/0:15,0:15:45.15:0,45,4296	1/1:0,4:4:12.04:950,12,0	1/1:0,11:11:24.08:1899,24,0	1/1:0,9:9:24.08:1897,24,0	0/0:12,0:12:36.12:0,36,4138	0/0:18,0:18:54.19:0,54,6192	0/0:16,0:16:48.15:0,48,4490	0/0:29,0:29:87.30:0,87,9822	0/0:21,0:20:60.21:0,60,5966	0/0:24,0:24:72.25:0,72,8921	0/0:28,0:28:84.27:0,84,9087	1/1:0,13:13:36.12:2699,36,0	1/1:0,12:12:30.10:2191,30,0	1/1:0,0:1:3.01:237,3,0	0/0:19,0:19:57.20:0,57,6036	0/0:30,0:30:90.30:0,90,8791	0/0:28,0:28:84.29:0,84,9381	0/0:15,0:15:45.15:0,45,5286
chr10	94116569	.	G	GC	9472.06	PASS	AB=0.572;AC=46;AF=0.821;AN=56;BaseQRankSum=-1.758;DP=588;FS=6.404;HRun=8;HaplotypeScore=93.0302;InbreedingCoeff=0.7472;MQ=91.77;MQ0=0;MQRankSum=-6.907;QD=20.96;ReadPosRankSum=1.468;VQSLOD=4.7178;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:53:99:0,135,1235	0/1:2,5:7:12.41:123,0,12	0/0:39,1:39:81.04:0,81,691	0/0:21,0:21:14.29:0,14,344	1/1:1,11:12:36.11:413,36,0	1/1:3,1:27:40.18:233,40,0	1/1:6,0:26:37.03:191,37,0	1/1:10,19:29:60.06:665,60,0	1/1:3,21:24:54.16:623,54,0	1/1:2,27:29:81.24:933,81,0	1/1:2,10:12:30.09:346,30,0	1/1:2,0:12:19.89:101,20,0	1/1:5,0:17:28.99:149,29,0	1/1:2,1:18:19.99:105,20,0	0/1:3,11:14:15.78:342,0,16	1/1:6,21:27:35.71:656,36,0	0/0:1,0:21:38.70:0,39,114	1/1:2,10:12:27.08:312,27,0	1/1:5,14:19:45.12:510,45,0	1/1:4,15:19:17.67:457,18,0	1/1:5,23:28:36.43:666,36,0	1/1:5,0:13:19.89:101,20,0	1/1:6,0:14:14.30:77,14,0	1/1:2,1:18:25.64:130,26,0	1/1:1,16:17:45.13:519,45,0	1/1:0,30:30:90.25:1025,90,0	1/1:2,21:23:54.16:623,54,0	1/1:0,5:5:15.04:173,15,0
chr10	94117259	.	T	TG	15438.29	PASS	AB=0.625;AC=35;AF=0.625;AN=56;BaseQRankSum=-14.231;DP=606;FS=15.324;HRun=0;HaplotypeScore=60.0189;InbreedingCoeff=0.9198;MQ=64.41;MQ0=0;MQRankSum=2.430;QD=37.47;ReadPosRankSum=2.206;VQSLOD=3.4100;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:30:37.21:1053,37,0	1/1:0,12:12:36.12:527,36,0	0/0:26,0:22:47.25:0,47,613	0/0:16,0:15:41.86:0,42,470	1/1:0,35:35:97.58:1388,98,0	0/0:20,0:20:57.18:0,57,780	0/0:18,0:18:54.12:0,54,715	1/1:1,36:37:99:1396,108,0	1/1:0,17:17:48.16:702,48,0	1/1:1,26:27:78.22:1100,78,0	1/1:0,21:21:54.18:780,54,0	0/0:14,0:14:42.13:0,42,560	0/0:20,0:20:60.17:0,60,790	0/0:21,0:21:63.18:0,63,826	1/1:1,18:17:51.17:746,51,0	1/1:0,14:14:32.92:483,33,0	1/1:3,17:20:45.14:656,45,0	1/1:1,24:25:69.23:1007,69,0	1/1:3,14:15:38.14:494,38,0	1/1:0,27:27:78.18:1114,78,0	1/1:3,13:16:39.02:542,39,0	0/0:24,0:24:72.24:0,72,1002	0/0:24,0:24:72.15:0,72,932	0/0:10,0:10:27.08:0,27,359	1/1:1,19:20:12.79:702,13,0	1/1:1,33:34:99:1377,99,0	1/1:0,30:30:78.26:1140,78,0	0/1:4,6:10:90.82:233,0,91
chr10	94118156	.	C	CTTTCTGTTG	31890.18	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-8.329;DP=627;FS=6.522;HRun=0;HaplotypeScore=157.5910;InbreedingCoeff=0.9584;MQ=56.21;MQ0=1;MQRankSum=-15.851;QD=84.37;ReadPosRankSum=-2.771;VQSLOD=4.1632;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:30.10:0,30,832	1/1:2,5:7:18.06:802,18,0	0/0:37,0:29:69.17:0,69,1631	0/0:27,0:25:54.14:0,54,1206	1/1:12,19:33:54.19:2050,54,0	0/0:28,0:28:75.24:0,75,2043	0/0:15,0:15:39.12:0,39,1020	1/1:28,11:41:78.23:3118,78,0	1/1:10,18:28:60.21:2586,60,0	1/1:13,15:32:75.21:2967,75,0	1/1:14,17:32:66.18:2606,66,0	0/0:22,0:22:57.20:0,57,1655	0/0:18,0:18:45.15:0,45,1306	0/0:19,0:19:51.17:0,51,1449	1/1:4,14:18:45.15:2064,45,0	1/1:4,9:13:27.09:1266,27,0	1/1:2,6:8:6.02:281,6,0	1/1:1,3:4:6.02:282,6,0	1/1:10,11:21:45.15:1836,45,0	1/1:12,21:35:81.28:3213,81,0	1/1:6,3:10:9.03:273,9,0	0/0:34,0:34:99:0,102,2849	0/0:19,0:19:48.16:0,48,1285	0/0:16,0:16:42.14:0,42,1220	1/1:8,18:26:60.21:2616,60,0	1/1:12,15:28:60.20:2474,60,0	1/1:11,20:32:62.98:2890,63,0	1/1:6,2:8:15.05:567,15,0
chr10	94118697	.	CTTT	C	5653.62	PASS	AB=0.715;AC=35;AF=0.625;AN=56;BaseQRankSum=-5.514;DP=520;FS=17.412;HRun=15;HaplotypeScore=89.5804;InbreedingCoeff=0.7166;MQ=70.91;MQ0=3;MQRankSum=-3.767;QD=15.79;ReadPosRankSum=3.820;VQSLOD=2.1457;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:15:23.45:0,23,199	1/1:2,1:4:1.46:30,1,0	0/0:48,0:23:32.87:0,33,329	0/1:41,0:19:5.24:5,0,141	1/1:8,11:24:12.99:344,13,0	0/0:6,0:17:32.44:0,32,321	0/1:2,2:12:49.33:49,0,73	1/1:7,12:22:40.24:420,40,0	1/1:5,21:28:53.93:574,54,0	1/1:5,15:22:47.84:499,48,0	0/1:4,8:12:13.43:211,0,13	0/0:5,0:13:25.31:0,25,300	0/0:4,0:13:19.21:0,19,161	0/0:12,0:18:30.66:0,31,280	1/1:4,13:18:35.73:387,36,0	1/1:5,10:16:26.90:287,27,0	1/1:5,13:20:26.98:331,27,0	1/1:5,10:15:29.94:336,30,0	1/1:7,9:16:27.51:263,28,0	1/1:4,12:18:10.91:282,11,0	1/1:5,9:16:23.81:253,24,0	0/0:7,1:15:28.25:0,28,318	0/0:7,1:15:2.31:0,2,300	0/0:2,0:7:11.95:0,12,91	1/1:1,9:12:23.86:253,24,0	1/1:7,10:19:28.27:317,28,0	1/1:4,20:30:56.60:543,57,0	1/1:1,10:12:24.01:269,24,0
chr10	94118870	.	ATTAGTGTGTG	A	6273.88	PASS	AB=0.912;AC=21;AF=0.375;AN=56;BaseQRankSum=-2.161;DP=496;FS=0.873;HRun=0;HaplotypeScore=139.6472;InbreedingCoeff=0.1746;MQ=50.63;MQ0=43;MQRankSum=1.019;QD=21.63;ReadPosRankSum=1.200;VQSLOD=3.5405;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:20.23:0,20,370	0/1:4,0:4:79.48:79,0,169	0/0:27,0:6:18.06:0,18,297	0/0:21,0:5:11.87:0,12,200	0/1:19,0:18:99:410,0,291	0/0:15,0:14:30.07:0,30,653	0/0:19,0:19:42.05:0,42,875	1/1:4,0:30:31.44:977,31,0	0/1:18,0:16:99:239,0,435	0/1:20,0:16:99:320,0,385	0/1:14,0:13:0:0,0,0	0/0:17,0:16:36.08:0,36,861	0/0:18,0:17:51.17:0,51,1022	0/0:17,0:17:51.17:0,51,1422	0/0:11,0:12:12.04:0,12,257	0/1:16,0:16:99:256,0,415	0/1:16,0:17:87.42:346,0,87	0/1:16,0:16:99:295,0,313	1/1:20,0:16:45.13:679,45,0	0/1:3,18:22:9.82:632,0,10	1/1:5,18:22:6.02:118,6,0	0/0:19,0:19:48.16:0,48,1071	0/0:10,0:9:18.06:0,18,299	0/0:20,0:18:32.89:0,33,962	0/1:17,0:15:99:307,0,277	1/1:2,18:20:57.19:974,57,0	0/1:4,17:20:51.04:568,0,51	1/1:1,0:4:6.02:73,6,0
chr10	94118871	.	TTA	T	6709.37	PASS	AB=0.910;AC=32;AF=0.571;AN=56;BaseQRankSum=3.063;DP=497;FS=16.015;HRun=0;HaplotypeScore=83.6419;InbreedingCoeff=0.5280;MQ=50.72;MQ0=43;MQRankSum=-1.209;QD=20.33;ReadPosRankSum=-1.609;VQSLOD=3.6932;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:22.71:0,23,253	1/1:3,0:4:11.07:110,11,0	0/0:26,0:6:18.06:0,18,297	0/0:21,0:5:11.87:0,12,200	1/1:19,1:20:46.69:606,47,0	0/0:16,0:15:2.26:0,2,374	0/0:19,0:19:42.04:0,42,600	1/1:35,0:31:67.12:1041,67,0	1/1:16,0:16:4.77:437,5,0	1/1:19,1:16:41.36:536,41,0	0/1:1,13:13:0:0,0,0	0/0:18,0:17:36.08:0,36,513	0/1:18,0:17:40.55:41,0,555	0/0:17,0:17:2.33:0,2,696	1/1:1,10:11:12.03:174,12,0	1/1:17,0:17:10.14:512,10,0	1/1:17,0:17:5.14:480,5,0	0/1:15,1:16:1.21:396,0,1	1/1:14,7:16:45.13:623,45,0	0/1:23,0:22:16.62:136,0,17	1/1:22,0:21:5.38:48,5,0	0/0:19,0:19:48.16:0,48,792	0/1:10,0:9:3.04:3,0,230	0/0:20,0:18:32.89:0,33,481	1/1:16,1:15:42.09:559,42,0	1/1:21,0:20:57.16:788,57,0	0/1:21,0:19:15.84:141,0,16	1/1:4,0:4:6.02:79,6,0
chr10	94118873	.	A	AGTGT	2485.06	PASS	AB=1.000;AC=33;AF=0.635;AN=52;BaseQRankSum=-6.096;DP=551;FS=8.468;HRun=0;HaplotypeScore=139.1282;InbreedingCoeff=0.5003;MQ=49.49;MQ0=44;MQRankSum=2.666;QD=6.77;ReadPosRankSum=-3.974;VQSLOD=0.7307;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:10:1.55:18,0,2	1/1:6,0:5:4.57:73,5,0	./.	./.	1/1:26,0:25:14.88:154,15,0	1/1:14,7:26:6.02:140,6,0	1/1:17,4:23:5.65:82,6,0	1/1:36,0:32:4.61:18,5,0	1/1:23,0:21:10.74:120,11,0	1/1:24,0:20:24.08:363,24,0	0/0:16,0:15:0:0,0,0	1/1:12,6:18:12.04:277,12,0	1/1:22,0:20:15.52:257,16,0	0/1:18,0:18:27.87:239,0,28	0/0:12,0:12:11.99:0,12,102	1/1:18,0:18:18.06:300,18,0	0/0:18,0:18:5.14:0,5,40	0/1:18,0:18:1.24:64,0,1	0/0:21,0:16:3:0,3,28	0/0:24,0:23:18.74:0,19,147	1/1:23,0:22:2.04:6,2,0	1/1:18,1:19:3.01:70,3,0	1/1:14,0:13:5.85:69,6,0	1/1:16,5:20:11.78:222,12,0	1/1:19,0:17:10.59:169,11,0	0/0:22,0:20:5.80:0,6,35	0/0:21,0:19:17.59:0,18,165	0/0:4,0:4:0:0,0,0
chr10	94120859	.	TTC	T	548.28	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.069;DP=620;FS=3.742;HRun=0;HaplotypeScore=70.1668;InbreedingCoeff=0.9990;MQ=89.74;MQ0=0;MQRankSum=0.659;QD=34.27;ReadPosRankSum=0.380;VQSLOD=5.5185;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:42.14:643,42,0	0/0:13,0:13:39.09:0,39,700	0/0:29,0:29:81.74:0,82,1435	0/0:20,0:20:57.15:0,57,1046	0/0:36,0:36:99:0,108,2069	0/0:23,0:23:69.24:0,69,1332	0/0:12,0:12:36.11:0,36,651	0/0:31,0:31:87.30:0,87,1669	0/0:21,0:21:60.21:0,60,1149	0/0:24,0:24:66.23:0,66,1275	0/0:27,0:27:75.24:0,75,1412	0/0:16,0:16:48.15:0,48,894	0/0:16,0:16:48.16:0,48,927	0/0:22,0:22:63.20:0,63,1183	0/0:18,0:18:54.19:0,54,1035	0/0:20,0:20:60.19:0,60,1125	0/0:19,0:19:54.19:0,54,1042	0/0:12,0:12:33.10:0,33,603	0/0:20,0:20:60.21:0,60,1155	0/0:41,0:41:99:0,123,2296	0/0:30,0:30:90.31:0,90,1738	0/0:27,0:27:81.28:0,81,1563	0/0:29,0:29:87.30:0,87,1665	0/0:11,0:11:30.10:0,30,578	0/0:18,0:18:51.17:0,51,984	0/0:21,0:21:63.22:0,63,1216	0/0:28,0:28:84.29:0,84,1623	0/0:20,0:19:60.21:0,60,1146
chr10	94121767	.	AAACCAAACAACC	A	3426.84	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-6.102;DP=483;FS=2.211;HRun=0;HaplotypeScore=158.5079;InbreedingCoeff=0.1231;MQ=59.61;MQ0=16;MQRankSum=1.950;QD=13.99;ReadPosRankSum=-1.802;VQSLOD=2.6893;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:66.08:0,66,1217	0/1:4,0:4:41.95:42,0,203	0/0:43,0:19:41.13:0,41,523	0/0:47,0:23:43.25:0,43,405	0/1:13,0:13:70.39:70,0,899	0/0:19,0:19:29.80:0,30,246	0/0:7,0:7:9.64:0,10,90	0/1:22,0:21:24.65:407,0,25	0/1:20,0:20:99:100,0,896	0/1:13,0:13:71.88:72,0,486	0/1:11,0:11:99:105,0,608	0/0:18,0:17:32.83:0,33,307	0/0:11,0:11:23.46:0,23,264	0/0:12,0:12:13.29:0,13,148	0/1:13,0:13:20.89:21,0,1052	0/1:15,0:15:99:140,0,879	0/1:24,0:24:99:235,0,1115	0/1:13,0:13:47.89:48,0,767	1/1:4,12:15:29.83:472,30,0	1/1:2,8:10:20.99:465,21,0	1/1:4,16:19:6.02:112,6,0	0/0:8,0:8:19.94:0,20,140	0/0:18,0:18:25.80:0,26,179	0/0:24,0:25:40.67:0,41,376	0/1:10,0:10:73.71:74,0,680	1/1:2,12:14:35.33:623,35,0	1/1:1,14:15:9.03:331,9,0	1/1:1,11:12:3.01:110,3,0
chr10	94121773	.	A	ACC	918.52	PASS	AB=0.806;AC=10;AF=0.179;AN=56;BaseQRankSum=3.007;DP=457;FS=21.032;HRun=0;HaplotypeScore=90.7728;InbreedingCoeff=-0.2266;MQ=58.11;MQ0=17;MQRankSum=3.018;QD=7.59;ReadPosRankSum=0.601;VQSLOD=1.2832;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:66.21:0,66,1016	0/1:3,1:4:24.58:25,0,31	0/0:43,0:18:48.11:0,48,721	0/0:43,0:16:45.15:0,45,678	0/1:12,1:13:58.05:101,0,58	0/0:20,0:20:48.14:0,48,691	0/0:7,0:7:12.04:0,12,174	0/0:22,0:21:33.63:0,34,319	0/1:13,5:18:99:156,0,128	0/1:10,1:11:63.48:63,0,112	0/1:7,4:11:72.33:119,0,72	0/0:18,0:17:39.13:0,39,580	0/0:10,0:10:27.09:0,27,407	0/0:8,0:8:18.06:0,18,247	0/1:6,6:12:20.99:175,0,21	0/1:8,7:15:81:218,0,81	0/0:22,0:22:60.26:0,60,420	0/1:10,4:14:85.44:85,0,149	0/1:13,0:12:1.97:2,0,99	0/0:8,0:8:14.10:0,14,86	0/0:18,0:17:3:0,3,27	0/0:11,0:11:18.05:0,18,233	0/0:17,0:17:29.57:0,30,426	0/0:24,0:24:44.88:0,45,653	0/1:7,3:10:76.18:112,0,76	0/0:12,0:12:8.82:0,9,183	0/0:14,0:14:8.39:0,8,38	0/0:11,0:11:2.80:0,3,13
chr10	94121774	.	ACAACCAAC	A	2770.12	PASS	AB=0.853;AC=26;AF=0.481;AN=54;BaseQRankSum=0.132;DP=454;FS=0.000;HRun=0;HaplotypeScore=122.7349;InbreedingCoeff=0.7185;MQ=57.97;MQ0=17;MQRankSum=-6.810;QD=14.58;ReadPosRankSum=0.213;VQSLOD=2.7224;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:27:26.95:0,27,244	0/0:3,0:4:6.02:0,6,165	0/0:43,0:18:3.90:0,4,47	./.	0/0:12,0:13:24.08:0,24,706	1/1:10,10:20:18.05:452,18,0	1/1:2,5:7:6.02:151,6,0	0/0:22,0:21:2.98:0,3,21	0/0:12,0:17:27.09:0,27,788	0/0:9,0:10:15.05:0,15,437	0/0:7,0:11:18.06:0,18,540	1/1:9,9:17:15.05:376,15,0	1/1:6,4:10:9.03:226,9,0	1/1:3,5:8:12.04:301,12,0	0/0:6,0:12:27.09:0,27,889	0/0:8,0:15:24.08:0,24,790	0/0:22,0:22:30.08:0,30,981	0/0:10,0:14:27.09:0,27,700	1/1:13,0:12:8.89:124,9,0	0/1:8,0:8:1.65:150,0,2	1/1:18,0:17:2.03:4,2,0	1/1:3,8:11:17.97:316,18,0	1/1:5,11:16:12.11:372,12,0	0/1:14,10:24:9.66:83,0,10	0/0:6,0:9:18.06:0,18,526	1/1:12,0:12:14.91:197,15,0	1/1:14,0:14:9.03:161,9,0	1/1:11,0:11:3.01:54,3,0
chr10	94122205	.	GTA	G	1140.32	PASS	AB=0.519;AC=21;AF=0.618;AN=34;BaseQRankSum=2.694;DP=300;FS=3.448;HRun=0;HaplotypeScore=24.1909;InbreedingCoeff=0.5998;MQ=22.43;MQ0=203;MQRankSum=-0.474;QD=10.27;ReadPosRankSum=0.068;VQSLOD=2.8943;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,5:3:9.03:128,9,0	./.	./.	1/1:2,6:5:3.01:43,3,0	0/0:15,0:8:9.03:0,9,164	0/0:16,0:1:3.01:0,3,51	./.	1/1:1,7:5:9.03:128,9,0	1/1:2,11:8:17.91:238,18,0	1/1:2,8:4:6.02:73,6,0	0/0:13,0:4:3.01:0,3,55	0/0:10,0:5:9.02:0,9,160	0/0:11,0:5:6.02:0,6,109	1/1:2,12:7:8.94:102,9,0	0/1:1,13:3:0:0,0,0	./.	./.	./.	./.	./.	0/0:7,0:2:6.02:0,6,109	./.	./.	1/1:0,8:3:3.01:43,3,0	1/1:0,8:5:12.04:172,12,0	1/1:1,19:11:20.93:299,21,0	1/1:0,3:1:3.01:43,3,0
chr10	94122681	.	A	AG	420.73	PASS	AB=0.958;AC=21;AF=0.875;AN=24;BaseQRankSum=-1.558;DP=207;FS=10.985;HRun=1;HaplotypeScore=16.8689;InbreedingCoeff=0.1067;MQ=51.74;MQ0=161;MQRankSum=-2.462;QD=4.12;ReadPosRankSum=1.357;VQSLOD=-0.7357;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,2:1:3.01:43,3,0	0/1:14,0:3:8.69:9,0,43	0/1:12,0:6:0.83:1,0,22	1/1:1,12:6:8.99:98,9,0	1/1:8,0:4:5.49:24,5,0	1/1:8,0:1:2.84:14,3,0	./.	./.	1/1:2,4:2:6.02:82,6,0	1/1:4,3:4:6.01:59,6,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:10,0:6:5.85:44,6,0	0/1:6,0:3:0:0,0,0	./.	./.	1/1:2,5:2:6.02:88,6,0	./.	1/1:4,2:2:3.01:44,3,0
chr10	94128633	.	TA	T	18943.65	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=5.824;DP=580;FS=1.885;HRun=1;HaplotypeScore=60.6702;InbreedingCoeff=0.9837;MQ=90.96;MQ0=0;MQRankSum=-6.078;QD=38.98;ReadPosRankSum=5.203;VQSLOD=5.2470;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.25:0,84,1306	1/1:0,4:4:9.03:126,9,0	0/0:21,0:21:60.18:0,60,916	0/0:26,0:26:78.15:0,78,1168	1/1:0,27:27:78.22:1069,78,0	1/1:0,28:28:78.26:1091,78,0	1/1:0,16:16:45.15:629,45,0	1/1:0,22:22:66.22:923,66,0	1/1:0,24:24:69.23:965,69,0	1/1:0,24:24:69.21:933,69,0	1/1:0,17:17:48.12:649,48,0	1/1:0,13:13:33.11:461,33,0	1/1:0,17:17:45.15:629,45,0	1/1:0,19:19:57.19:797,57,0	1/1:0,18:18:45.15:629,45,0	1/1:0,24:24:69.23:965,69,0	0/0:19,0:19:57.19:0,57,905	1/1:0,15:15:33.11:461,33,0	1/1:0,20:20:60.20:839,60,0	1/1:0,23:23:69.20:944,69,0	1/1:0,12:12:33.11:461,33,0	1/1:0,23:23:66.22:922,66,0	1/1:0,31:31:81.27:1130,81,0	1/1:0,17:17:42.14:587,42,0	1/1:0,17:17:51.17:713,51,0	1/1:0,23:23:66.19:888,66,0	1/1:0,40:40:99:1629,117,0	1/1:0,12:12:36.12:503,36,0
chr10	94130114	.	AT	A	311.42	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=2.411;DP=424;FS=6.335;HRun=8;HaplotypeScore=59.9888;InbreedingCoeff=0.6523;MQ=73.93;MQ0=0;MQRankSum=-2.661;QD=11.12;ReadPosRankSum=0.072;VQSLOD=2.1202;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:33.08:0,33,399	0/0:7,0:7:21.06:0,21,252	0/0:9,0:9:21:0,21,231	0/1:11,0:11:3.90:4,0,182	0/0:13,0:13:39.08:0,39,455	0/0:12,0:12:30.09:0,30,362	0/0:6,0:6:11.99:0,12,129	0/0:31,0:31:87.21:0,87,1015	0/0:14,1:15:7.12:0,7,357	0/0:18,0:18:51.15:0,51,607	0/0:20,0:20:54.17:0,54,652	0/0:8,0:8:18.06:0,18,217	0/0:14,0:14:42.13:0,42,507	0/0:20,0:20:51.15:0,51,605	0/0:13,0:13:36.11:0,36,435	0/0:21,0:21:57.13:0,57,661	1/1:2,15:17:42.06:405,42,0	0/0:14,0:14:39.09:0,39,457	0/0:25,0:24:63.19:0,63,760	0/0:16,0:16:45.12:0,45,522	0/0:9,0:9:27.08:0,27,324	0/0:9,0:9:24.07:0,24,290	0/0:9,0:9:21.05:0,21,234	0/0:12,0:12:33.10:0,33,399	0/0:24,0:24:63.19:0,63,752	0/0:18,0:18:45.14:0,45,544	0/0:27,0:27:75.19:0,75,870	0/0:9,0:9:27.08:0,27,326
chr10	94130236	.	T	TC	2214.32	PASS	AB=0.600;AC=49;AF=0.980;AN=50;DP=167;FS=0.000;HRun=5;HaplotypeScore=17.0155;InbreedingCoeff=-0.0009;MQ=23.42;MQ0=66;QD=13.75;VQSLOD=0.8588;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,3:5:9.03:113,9,0	1/1:3,0:2:2.98:22,3,0	./.	./.	1/1:1,4:4:9.03:118,9,0	1/1:3,11:12:24.08:309,24,0	1/1:1,3:3:9.03:118,9,0	1/1:6,7:9:21.07:274,21,0	1/1:5,3:4:9.03:118,9,0	1/1:3,2:2:6.02:79,6,0	1/1:2,1:1:3.01:39,3,0	1/1:4,1:2:3.01:39,3,0	1/1:3,2:3:3.01:39,3,0	1/1:5,3:4:6.02:79,6,0	0/1:1,2:2:0.01:0,0,0	1/1:4,4:5:12.04:158,12,0	1/1:2,1:1:3.01:39,3,0	1/1:6,3:2:3.01:40,3,0	1/1:6,2:3:6.02:79,6,0	1/1:8,1:2:6.02:79,6,0	./.	1/1:3,1:1:3.01:39,3,0	1/1:1,1:1:3.01:39,3,0	1/1:4,2:3:6.02:79,6,0	1/1:3,2:4:6.02:79,6,0	1/1:2,2:2:6.02:76,6,0	1/1:5,4:5:12.04:157,12,0	1/1:4,2:5:6.02:79,6,0
chr10	94133991	.	G	GCACACACACA	10041.85	PASS	AB=0.693;AC=48;AF=0.857;AN=56;BaseQRankSum=-2.198;DP=549;FS=18.487;HRun=0;HaplotypeScore=191.5520;InbreedingCoeff=0.3866;MQ=55.72;MQ0=6;MQRankSum=-3.388;QD=20.33;ReadPosRankSum=-0.923;VQSLOD=2.5685;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:35:30.01:353,0,30	1/1:5,0:11:2.82:50,3,0	0/0:23,0:9:3.01:0,3,53	0/0:13,0:9:3.01:0,3,42	1/1:16,4:22:8.24:371,8,0	1/1:15,0:26:20.41:294,20,0	0/1:16,0:26:49.75:126,0,50	1/1:27,0:27:40.62:886,41,0	1/1:16,4:22:18.06:763,18,0	1/1:20,1:24:34.93:1022,35,0	1/1:10,3:18:14.72:484,15,0	1/1:9,0:20:23.75:389,24,0	1/1:10,0:15:14.31:196,14,0	1/1:8,0:17:18.06:328,18,0	1/1:11,3:15:6.02:298,6,0	1/1:14,2:17:9.03:389,9,0	0/0:5,0:18:33.11:0,33,699	1/1:7,1:9:3.01:149,3,0	1/1:13,0:12:16.45:483,16,0	1/1:15,0:17:3.01:90,3,0	1/1:14,3:19:5.37:159,5,0	1/1:15,0:33:14.06:198,14,0	1/1:7,0:19:14.28:172,14,0	1/1:8,0:18:9.03:151,9,0	1/1:5,5:11:11.73:537,12,0	1/1:18,3:23:33.11:1145,33,0	1/1:14,3:19:15.05:615,15,0	1/1:8,2:13:10.28:392,10,0
chr10	94134235	.	G	GT	4591.60	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=6.018;DP=522;FS=3.780;HRun=2;HaplotypeScore=101.6009;InbreedingCoeff=-0.1263;MQ=76.06;MQ0=0;MQRankSum=-4.547;QD=11.37;ReadPosRankSum=5.339;VQSLOD=3.4756;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:40:99:0,101,704	0/1:5,0:5:6.96:7,0,17	0/0:19,0:19:52.24:0,52,575	0/0:33,0:31:66.65:0,67,692	0/1:10,0:10:7.63:8,0,60	1/1:6,13:19:50.89:550,51,0	1/1:10,10:20:41.25:478,41,0	0/1:24,0:24:17.52:18,0,216	0/1:17,0:17:28.76:29,0,80	0/1:16,0:16:18.89:19,0,133	0/1:12,0:12:21.23:21,0,36	1/1:3,8:11:30:309,30,0	1/1:7,15:22:51.14:580,51,0	1/1:4,19:23:62.63:659,63,0	0/1:19,0:19:40.67:41,0,91	0/1:20,0:20:49.78:50,0,59	0/0:26,0:26:71.42:0,71,506	0/1:5,0:5:12.39:12,0,64	0/1:13,0:13:12.02:12,0,142	0/1:20,0:20:18.29:63,0,18	0/1:25,0:25:59.08:59,0,103	1/1:5,15:20:16.47:378,16,0	1/1:6,17:23:51.75:536,52,0	1/1:1,20:21:45.88:561,46,0	0/1:13,0:13:40.37:56,0,40	0/1:16,0:16:18.59:52,0,19	0/1:20,0:20:54.15:54,0,59	0/1:10,0:10:39.78:40,0,41
chr10	94134236	.	T	TG	5252.68	PASS	AB=0.606;AC=42;AF=0.750;AN=56;BaseQRankSum=-1.154;DP=533;FS=4.716;HRun=9;HaplotypeScore=107.1814;InbreedingCoeff=0.3907;MQ=75.31;MQ0=0;MQRankSum=-3.703;QD=12.51;ReadPosRankSum=1.202;VQSLOD=4.4683;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:39:62.92:0,63,184	1/1:1,6:7:6.02:66,6,0	0/0:17,0:18:39.17:0,39,305	0/0:31,0:29:43.94:0,44,362	1/1:5,7:12:12.02:125,12,0	1/1:19,0:19:38.09:169,38,0	1/1:20,0:20:35.50:159,35,0	0/1:10,16:26:6.97:357,0,7	1/1:4,14:18:1.02:239,1,0	1/1:6,8:14:21.06:232,21,0	1/1:3,10:13:15.04:166,15,0	1/1:11,0:11:19.27:85,19,0	1/1:15,0:22:46.89:213,47,0	1/1:22,0:23:47.22:211,47,0	1/1:7,12:19:10.04:339,10,0	0/1:4,15:19:13.01:326,0,13	0/0:0,0:25:48.89:0,49,144	0/1:3,4:7:34.09:103,0,34	0/1:7,7:14:31.04:145,0,31	1/1:8,13:21:36.94:384,37,0	0/1:8,20:28:3.51:417,0,4	1/1:20,0:20:13.30:97,13,0	1/1:24,0:24:39.01:169,39,0	1/1:21,0:21:34.30:181,34,0	1/1:5,8:13:1.02:239,1,0	1/1:4,12:16:26.63:286,27,0	1/1:6,15:21:33.09:365,33,0	0/1:3,9:12:5:178,0,5
chr10	94134241	.	G	GGT	4847.39	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.232;DP=510;FS=0.000;HRun=0;HaplotypeScore=110.3384;InbreedingCoeff=0.9774;MQ=78.82;MQ0=0;MQRankSum=-2.823;QD=31.89;ReadPosRankSum=3.411;VQSLOD=7.0608;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,104,782	0/0:7,0:7:10.99:0,11,70	0/0:18,0:18:47.92:0,48,586	0/0:31,0:29:53.03:0,53,721	0/0:13,0:13:16.92:0,17,97	1/1:8,13:21:48.71:621,49,0	1/1:6,10:16:26.52:477,27,0	0/0:20,0:20:46.66:0,47,300	0/0:18,0:18:31.92:0,32,183	0/0:13,0:13:23.27:0,23,99	0/0:14,0:14:24.48:0,24,151	1/1:2,8:10:9.22:286,9,0	1/1:4,14:19:54.12:701,54,0	1/1:3,19:23:45.40:771,45,0	0/0:18,0:18:36.33:0,36,191	0/0:18,0:18:33.21:0,33,184	0/0:26,0:26:74.59:0,75,559	0/0:7,0:7:16.49:0,16,138	0/0:17,0:17:36.48:0,36,280	0/0:17,0:17:39.44:0,39,188	0/0:25,0:25:54.48:0,54,312	1/1:5,14:19:41.71:509,42,0	1/1:7,17:24:56.54:743,57,0	1/1:4,16:20:54.15:739,54,0	0/0:11,0:11:21.72:0,22,109	0/0:18,0:18:38.85:0,39,232	0/0:19,0:19:32.84:0,33,138	0/0:10,0:10:17.73:0,18,96
chr10	94134582	.	TC	T	13512.09	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=14.983;DP=584;FS=5.143;HRun=1;HaplotypeScore=109.2750;InbreedingCoeff=0.9962;MQ=65.53;MQ0=0;MQRankSum=-0.004;QD=39.74;ReadPosRankSum=1.776;VQSLOD=4.7978;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1749	1/1:0,6:6:18.06:252,18,0	0/0:10,0:10:27.03:0,27,379	0/0:6,0:6:15.01:0,15,212	1/1:0,22:22:63.21:877,63,0	0/0:18,0:18:54.16:0,54,824	0/0:21,0:21:63.21:0,63,1004	1/1:0,44:44:99:1753,129,0	1/1:0,18:18:51.17:713,51,0	1/1:0,26:26:75.22:1045,75,0	1/1:0,17:17:51.17:713,51,0	0/0:20,0:20:60.20:0,60,957	0/0:26,0:26:78.25:0,78,1217	0/0:21,0:21:63.19:0,63,953	1/1:0,28:28:81.27:1132,81,0	1/1:0,11:11:24.08:336,24,0	0/0:28,0:28:84.29:0,84,1332	1/1:0,18:18:54.18:755,54,0	1/1:1,15:16:42.10:555,42,0	1/1:0,24:24:72.24:1001,72,0	1/1:0,26:26:72.24:1005,72,0	0/0:13,0:13:39.13:0,39,624	0/0:27,0:27:78.25:0,78,1218	0/0:17,0:17:51.17:0,51,794	1/1:0,28:28:81.27:1131,81,0	1/1:0,19:19:57.19:797,57,0	1/1:1,21:22:63.21:867,63,0	1/1:0,15:15:42.14:583,42,0
chr10	94137450	.	CCT	C	3539.83	PASS	AB=0.913;AC=45;AF=0.804;AN=56;BaseQRankSum=-6.425;DP=437;FS=6.569;HRun=0;HaplotypeScore=77.6465;InbreedingCoeff=0.3000;MQ=59.27;MQ0=24;MQRankSum=4.355;QD=9.70;ReadPosRankSum=6.527;VQSLOD=2.3544;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,4:18:23.96:241,24,0	1/1:5,0:4:8.82:85,9,0	0/0:32,0:23:14.90:0,15,215	0/0:30,0:17:12.92:0,13,93	1/1:12,2:14:14.87:115,15,0	1/1:15,1:16:21.61:158,22,0	1/1:15,0:12:18.23:246,18,0	0/1:45,10:53:87.25:405,0,87	1/1:4,5:8:3.38:64,3,0	0/1:22,3:20:22.77:372,0,23	1/1:16,1:15:15.04:182,15,0	1/1:8,0:8:10.23:96,10,0	1/1:5,12:16:2.97:34,3,0	1/1:5,1:6:8.53:71,9,0	1/1:12,6:13:13.09:145,13,0	1/1:6,3:9:18.01:194,18,0	0/0:10,0:9:4.80:0,5,28	1/1:5,0:4:2.11:34,2,0	0/1:15,2:15:15.59:72,0,16	1/1:21,2:22:29.79:318,30,0	1/1:6,1:5:2.84:37,3,0	1/1:10,0:8:11.66:102,12,0	1/1:12,0:10:12.04:143,12,0	1/1:12,0:12:12:122,12,0	1/1:10,4:14:14.88:147,15,0	0/1:13,1:13:21.09:103,0,21	1/1:4,1:4:5.88:52,6,0	0/1:5,0:6:1.05:1,0,6
chr10	94137468	.	C	CT	812.33	PASS	AB=0.953;AC=12;AF=0.214;AN=56;BaseQRankSum=4.305;DP=473;FS=28.140;HRun=0;HaplotypeScore=98.5171;InbreedingCoeff=-0.1399;MQ=45.96;MQ0=32;MQRankSum=-4.051;QD=4.30;ReadPosRankSum=2.975;VQSLOD=1.5305;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,1:15:18.55:0,19,81	0/0:5,0:4:5.35:0,5,14	0/0:34,0:15:26.11:0,26,248	0/0:53,0:20:34.03:0,34,440	0/0:12,3:14:1.82:0,2,5	0/1:17,0:16:5.96:6,0,36	0/1:17,0:14:10.98:11,0,21	0/1:51,2:51:99:383,0,280	0/1:9,0:8:6.20:31,0,6	0/1:22,3:20:75.93:133,0,76	0/0:22,2:20:5.88:0,6,23	0/0:9,0:8:8.62:0,9,28	0/0:15,0:14:1.68:0,2,7	0/0:6,0:4:1.89:0,2,8	0/1:17,0:12:21.39:22,0,21	0/1:8,0:8:21.60:22,0,22	0/0:9,0:8:14.62:0,15,92	0/0:4,0:3:8.06:0,8,80	0/1:13,0:11:11.59:164,0,12	0/0:29,0:28:22.02:0,22,70	0/0:6,0:3:1.82:0,2,5	0/0:15,0:13:1.96:0,2,12	0/0:18,1:15:7.71:0,8,23	0/0:9,0:9:6.60:0,7,24	0/0:15,0:14:10.45:0,10,40	0/1:15,2:16:88.47:88,0,123	1/1:6,0:5:0.19:62,0,0	0/1:5,2:7:24.72:27,0,25
chr10	94137480	.	T	TC	723.25	PASS	AB=0.918;AC=21;AF=0.375;AN=56;BaseQRankSum=1.976;DP=440;FS=4.538;HRun=1;HaplotypeScore=69.0319;InbreedingCoeff=0.1260;MQ=51.09;MQ0=35;MQRankSum=-0.340;QD=3.19;ReadPosRankSum=0.779;VQSLOD=0.0035;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:11:8.60:0,9,113	1/1:4,0:3:3.01:39,3,0	0/0:37,0:14:24.99:0,25,309	0/0:67,0:21:31.22:0,31,416	0/1:12,0:11:0:0,0,0	0/0:14,1:14:10.61:0,11,80	1/1:11,0:8:0.47:1,0,0	0/1:49,0:47:99:275,0,657	0/0:8,0:7:2.87:0,3,7	0/1:16,6:17:99:144,0,252	0/0:19,1:15:3.84:0,4,21	1/1:4,1:4:2.62:21,3,0	0/0:13,0:12:5.85:0,6,67	0/0:7,0:4:2.53:0,3,37	1/1:11,5:11:5.38:80,5,0	0/1:6,1:7:2.28:35,0,2	0/0:7,0:6:15.02:0,15,171	0/0:3,0:3:6.02:0,6,72	0/1:9,3:10:93.26:93,0,96	0/1:20,1:20:6.59:7,0,25	0/1:5,0:2:0:0,0,0	0/0:16,0:14:6.02:0,6,74	0/1:13,1:10:0:1,0,0	0/0:7,0:7:6.02:0,6,77	0/1:14,3:16:10.34:32,0,10	0/1:15,2:16:39.23:39,0,302	1/1:4,1:4:8.97:93,9,0	0/1:10,0:10:7.44:7,0,130
chr10	94137482	.	T	TC	902.88	PASS	AB=0.927;AC=25;AF=0.463;AN=54;BaseQRankSum=1.384;DP=431;FS=3.248;HRun=1;HaplotypeScore=66.4375;InbreedingCoeff=0.2304;MQ=52.75;MQ0=35;MQRankSum=-0.607;QD=4.18;ReadPosRankSum=-0.584;VQSLOD=0.1693;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:10:5.94:0,6,93	1/1:4,0:3:3.01:33,3,0	0/0:35,0:14:12.83:0,13,304	0/0:71,0:23:35.58:0,36,474	./.	0/0:14,0:13:10.59:0,11,79	1/1:11,0:8:0.47:1,0,0	0/1:47,2:47:99:524,0,646	1/1:7,1:7:1.24:3,1,0	0/1:17,3:15:99:171,0,226	0/0:18,1:14:3.89:0,4,29	1/1:4,0:3:2.69:33,3,0	0/0:11,0:11:5.85:0,6,65	0/0:7,0:4:2.53:0,3,38	1/1:12,4:11:4.23:47,4,0	1/1:7,0:7:5.33:46,5,0	0/0:7,0:6:14.97:0,15,151	0/0:3,0:3:3.01:0,3,36	0/1:11,0:9:49.17:49,0,89	1/1:19,2:20:0.96:19,1,0	0/1:4,1:2:0:0,0,0	0/0:16,0:14:5.90:0,6,40	0/1:14,0:10:0:1,0,0	0/0:7,0:7:6.02:0,6,70	1/1:17,0:16:5.93:43,6,0	0/1:11,3:13:35.17:35,0,288	1/1:4,1:4:8.02:36,8,0	0/1:10,0:10:10.26:10,0,144
chr10	94138608	.	CTT	C	676.35	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.207;DP=489;FS=6.404;HRun=12;HaplotypeScore=59.3980;InbreedingCoeff=0.9572;MQ=68.31;MQ0=0;MQRankSum=0.623;QD=19.32;ReadPosRankSum=2.807;VQSLOD=2.6510;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:15:33.07:336,33,0	0/0:5,0:5:15.05:0,15,225	0/0:8,0:8:18.02:0,18,214	0/0:9,0:6:8.86:0,9,88	0/0:25,0:29:83.73:0,84,1129	0/0:13,0:13:36.10:0,36,496	0/0:16,0:16:39.13:0,39,581	0/0:22,0:24:48.08:0,48,612	0/0:18,0:19:44.63:0,45,614	0/0:29,0:29:72.19:0,72,968	0/0:19,0:20:57.16:0,57,795	0/0:12,0:13:29.56:0,30,372	0/0:21,0:22:50.66:0,51,719	0/0:13,0:14:35.53:0,36,400	0/0:21,0:21:54.16:0,54,766	0/0:15,0:15:42:0,42,553	1/1:2,17:20:47.80:462,48,0	0/0:11,0:13:35.07:0,35,427	0/0:15,0:16:35.57:0,36,476	0/0:16,0:16:36.59:0,37,538	0/0:14,0:14:36.08:0,36,476	0/0:19,0:20:59.66:0,60,801	0/0:15,0:15:36.11:0,36,507	0/0:13,0:13:39.13:0,39,582	0/0:19,0:19:45.14:0,45,652	0/0:17,0:19:47.51:0,48,645	0/0:28,0:31:88.72:0,89,1170	0/0:20,0:20:51.08:0,51,711
chr10	94138808	.	AT	A	19827.62	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=11.792;DP=644;FS=0.000;HRun=2;HaplotypeScore=107.3176;InbreedingCoeff=0.9992;MQ=87.48;MQ0=0;MQRankSum=-6.446;QD=36.12;ReadPosRankSum=5.258;VQSLOD=4.5118;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.24:0,78,1147	1/1:1,12:13:36.12:468,36,0	0/0:24,0:24:69.23:0,69,1008	0/0:20,0:20:48.13:0,48,654	1/1:0,27:27:72.23:933,72,0	1/1:0,17:17:48.16:623,48,0	1/1:0,27:27:69.22:896,69,0	1/1:2,32:34:96.27:1204,96,0	1/1:0,27:27:81.26:1052,81,0	1/1:0,28:28:84.27:1090,84,0	1/1:1,24:25:66.21:857,66,0	1/1:0,11:11:27.09:351,27,0	1/1:0,27:27:78.25:1013,78,0	1/1:0,13:13:33.11:428,33,0	1/1:1,31:32:87.28:1130,87,0	1/1:0,21:21:57.19:740,57,0	0/0:24,0:24:69.23:0,69,1034	1/1:0,11:11:33.11:428,33,0	1/1:1,20:21:57.19:740,57,0	1/1:1,30:31:84.27:1091,84,0	1/1:0,16:16:45.15:584,45,0	1/1:0,24:24:66.21:857,66,0	1/1:0,21:21:63.20:818,63,0	1/1:0,21:21:54.18:701,54,0	1/1:0,29:29:87.28:1130,87,0	1/1:1,23:24:69.21:882,69,0	1/1:0,40:40:99:1480,114,0	1/1:0,9:9:27.05:332,27,0
chr10	94139492	.	GTTTTTT	G	14491.15	PASS	AB=0.515;AC=33;AF=0.589;AN=56;BaseQRankSum=-14.092;DP=606;FS=12.302;HRun=15;HaplotypeScore=189.9879;InbreedingCoeff=0.9107;MQ=66.82;MQ0=0;MQRankSum=-11.250;QD=39.81;ReadPosRankSum=1.227;VQSLOD=1.7063;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:23:39.44:0,39,188	1/1:2,5:7:15.04:272,15,0	0/0:30,0:27:71.63:0,72,1280	0/0:12,0:9:15.49:0,15,282	1/1:4,28:32:59.82:1089,60,0	0/0:2,0:23:18.93:0,19,75	0/0:9,0:14:17.56:0,18,95	1/1:7,12:19:35.90:651,36,0	1/1:4,18:23:50.90:905,51,0	1/1:6,28:35:87.17:1559,87,0	1/1:2,23:25:63.09:1168,63,0	0/0:4,0:24:40.75:0,41,161	0/1:1,0:17:24.06:24,0,73	0/0:3,0:24:39.71:0,40,156	1/1:3,15:18:39.07:723,39,0	1/1:1,25:26:57.16:1057,57,0	0/0:3,0:19:26.62:0,27,93	1/1:2,8:10:11.97:223,12,0	1/1:2,14:16:39.07:716,39,0	1/1:1,27:28:78.22:1405,78,0	1/1:5,9:14:11.99:178,12,0	0/0:3,0:25:39.57:0,40,133	0/0:7,0:27:34.92:0,35,144	0/0:1,0:18:22.95:0,23,78	1/1:0,24:24:66.22:1203,66,0	1/1:2,21:23:60.08:1040,60,0	1/1:1,26:27:78.25:1447,78,0	1/1:3,17:20:45.10:831,45,0
chr10	94145587	.	C	CGT	838.83	PASS	AB=0.869;AC=19;AF=0.352;AN=54;BaseQRankSum=-2.432;DP=621;FS=2.601;HRun=0;HaplotypeScore=94.7216;InbreedingCoeff=0.0129;MQ=56.98;MQ0=12;MQRankSum=0.096;QD=2.36;ReadPosRankSum=-0.955;VQSLOD=2.0921;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:43,0:39:18.40:139,18,0	0/0:13,0:14:11.86:0,12,111	0/1:24,0:5:0:0,0,0	./.	0/0:13,0:14:20.46:0,20,170	1/1:18,4:22:3.01:45,3,0	0/1:23,7:32:58.07:157,0,58	1/1:34,0:31:3.45:22,3,0	0/0:10,0:20:25.57:0,26,126	0/0:15,0:15:5.48:0,5,64	0/0:16,0:16:12.02:0,12,123	0/1:8,5:13:23.37:80,0,23	1/1:12,6:20:9.50:135,9,0	0/1:25,0:24:30.94:31,0,86	0/1:18,0:18:26.84:27,0,115	0/1:18,0:17:36.52:37,0,153	0/0:18,0:21:8.52:0,9,42	0/0:18,0:20:9.16:0,9,99	0/0:21,0:21:5.64:0,6,45	0/1:19,1:25:14.41:14,0,206	0/0:27,0:26:17.87:0,18,174	0/0:16,0:15:2.90:0,3,32	0/1:4,4:9:26.53:39,0,27	0/1:24,9:32:99:148,0,154	0/1:18,1:21:23.85:24,0,125	0/0:17,0:19:12.67:0,13,115	0/0:24,0:24:14.53:0,15,162	0/1:7,0:13:28.61:103,0,29
chr10	94146359	.	AAAAC	A	13681.31	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=6.792;DP=492;FS=6.071;HRun=0;HaplotypeScore=107.0171;InbreedingCoeff=0.9061;MQ=64.29;MQ0=2;MQRankSum=-5.605;QD=31.67;ReadPosRankSum=5.578;VQSLOD=4.5030;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,17:28:51.09:788,51,0	1/1:1,2:3:6.02:100,6,0	0/0:18,0:15:30.99:0,31,693	0/0:17,0:17:39.09:0,39,828	1/1:6,14:20:36.05:567,36,0	1/1:1,11:11:27.09:450,27,0	1/1:6,9:15:17.78:299,18,0	1/1:10,11:21:30.02:466,30,0	1/1:3,11:14:30.10:500,30,0	1/1:2,19:21:51.17:849,51,0	1/1:4,16:20:42.09:667,42,0	1/1:3,15:18:33.11:549,33,0	1/1:6,11:17:30.10:499,30,0	1/1:3,8:11:24.08:400,24,0	1/1:1,15:16:39.13:649,39,0	1/1:4,5:9:12.04:200,12,0	0/0:25,0:25:54.19:0,54,1285	1/1:4,10:14:5.10:425,5,0	1/1:6,8:13:21.06:326,21,0	1/1:3,15:18:45.15:749,45,0	1/1:7,14:21:24.08:399,24,0	1/1:2,13:15:36.04:539,36,0	1/1:2,15:17:36.12:599,36,0	1/1:2,23:25:51.17:849,51,0	1/1:2,21:23:51.17:849,51,0	1/1:6,22:28:63.20:1013,63,0	1/1:5,13:18:36.12:599,36,0	1/1:0,13:13:21.07:350,21,0
chr10	94146423	.	G	GAA	707.45	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.201;DP=562;FS=3.099;HRun=8;HaplotypeScore=102.5239;InbreedingCoeff=0.9339;MQ=70.44;MQ0=0;MQRankSum=-1.762;QD=27.21;ReadPosRankSum=0.584;VQSLOD=3.5345;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:25:54.14:802,54,0	0/0:4,0:4:9.02:0,9,100	0/0:13,0:13:23.39:0,23,222	0/0:7,0:7:18.03:0,18,184	0/0:33,0:33:84.21:0,84,936	0/0:13,0:13:33.07:0,33,358	0/0:15,0:15:42.10:0,42,459	0/0:28,0:28:72.14:0,72,774	0/0:16,0:16:39.09:0,39,435	0/0:30,0:30:72.16:0,72,796	0/0:23,0:23:60.15:0,60,669	0/0:17,0:17:36.08:0,36,401	0/0:13,0:13:27.53:0,28,302	0/0:12,0:12:33.07:0,33,359	0/0:22,0:22:60.16:0,60,668	0/0:13,0:13:30.08:0,30,334	0/0:38,0:38:99:0,105,1170	0/0:18,0:18:51.14:0,51,568	0/0:20,0:21:51.06:0,51,616	0/0:16,0:16:45.12:0,45,499	0/0:15,0:15:42.11:0,42,466	0/0:23,0:23:57.13:0,57,635	0/0:19,0:19:45.10:0,45,495	0/0:27,0:27:75.16:0,75,822	0/0:20,0:20:51.12:0,51,557	0/0:26,0:27:63.09:0,63,758	0/0:28,0:28:78.21:0,78,868	0/0:25,0:25:66.18:0,66,736
chr10	94146509	.	A	AAAC	1215.16	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.877;DP=612;FS=0.000;HRun=0;HaplotypeScore=90.5866;InbreedingCoeff=0.9942;MQ=68.65;MQ0=3;MQRankSum=-0.263;QD=40.51;ReadPosRankSum=1.386;VQSLOD=4.2148;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,24:30:30.32:1310,30,0	0/0:8,0:8:21.06:0,21,315	0/0:32,0:24:38.47:0,38,724	0/0:33,0:29:60.59:0,61,811	0/0:29,0:29:75.24:0,75,1168	0/0:14,0:14:42.13:0,42,646	0/0:15,0:15:45.14:0,45,699	0/0:26,0:26:72.24:0,72,1104	0/0:17,0:17:48.13:0,48,737	0/0:21,0:21:48.03:0,48,715	0/0:20,0:20:60.19:0,60,934	0/0:12,0:12:36.12:0,36,572	0/0:15,0:15:45.14:0,45,687	0/0:17,0:17:51.17:0,51,798	0/0:24,0:24:69.23:0,69,1080	0/0:10,0:10:27.09:0,27,427	0/0:47,0:47:99:0,123,1900	0/0:22,0:22:60.20:0,60,939	0/0:17,0:17:45.14:0,45,695	0/0:28,0:28:78.27:0,78,1232	0/0:17,0:17:48.13:0,48,696	0/0:22,0:22:66.22:0,66,1012	0/0:24,0:24:57.19:0,57,887	0/0:27,0:27:75.25:0,75,1177	0/0:19,0:19:54.17:0,54,845	0/0:25,0:25:60.20:0,60,958	0/0:23,0:23:66.18:0,66,991	0/0:18,0:18:48.16:0,48,736
chr10	94147572	.	G	GTGTA	15294.74	PASS	AB=0.693;AC=32;AF=0.571;AN=56;BaseQRankSum=-13.597;DP=654;FS=0.812;HRun=0;HaplotypeScore=100.0678;InbreedingCoeff=0.8202;MQ=64.18;MQ0=2;MQRankSum=1.154;QD=35.00;ReadPosRankSum=0.205;VQSLOD=4.6353;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:5.91:68,6,0	0/0:11,0:11:24.08:0,24,384	0/0:20,0:15:24.08:0,24,364	0/0:21,0:18:9:0,9,119	0/0:25,0:25:45.15:0,45,725	1/1:6,23:29:8.91:1253,9,0	1/1:8,13:21:27.09:651,27,0	1/1:24,11:40:48.07:926,48,0	0/0:20,0:20:45.15:0,45,717	0/0:25,0:25:63.18:0,63,948	0/0:12,0:12:24.08:0,24,386	1/1:8,25:35:43.26:1496,43,0	1/1:6,18:26:42.14:1012,42,0	1/1:9,12:22:33.11:778,33,0	0/0:34,0:34:66.21:0,66,1039	0/0:21,0:21:57.17:0,57,871	1/1:11,11:24:30.10:721,30,0	0/0:9,0:11:18.05:0,18,238	0/1:10,3:14:30.24:299,0,30	1/1:8,17:26:48.16:1156,48,0	1/1:5,21:28:51.18:1223,51,0	1/1:4,7:12:21.07:506,21,0	1/1:9,11:20:30.10:723,30,0	1/1:4,16:20:36.12:867,36,0	0/0:16,0:17:33.11:0,33,508	0/1:15,19:35:30.42:1321,0,30	1/1:19,24:44:69.24:1644,69,0	1/1:6,9:15:27.09:651,27,0
chr10	94147846	.	A	AT	3155.60	PASS	AB=0.981;AC=12;AF=0.214;AN=56;BaseQRankSum=-9.399;DP=524;FS=0.417;HRun=8;HaplotypeScore=53.4503;InbreedingCoeff=0.8224;MQ=73.85;MQ0=2;MQRankSum=0.426;QD=20.49;ReadPosRankSum=-0.029;VQSLOD=3.2838;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:47.99:0,48,432	0/0:12,0:12:30.01:0,30,275	0/1:16,0:8:0.66:1,0,30	0/1:23,1:20:28.29:28,0,135	0/0:27,1:28:34.40:0,34,569	0/0:22,0:22:60.03:0,60,549	0/0:10,0:10:30.02:0,30,275	0/0:22,0:22:57.03:0,57,522	0/0:18,0:18:51.02:0,51,467	0/0:31,0:31:84.03:0,84,763	0/0:21,0:21:57.03:0,57,522	0/0:16,0:16:42.01:0,42,380	0/0:20,0:20:57.03:0,57,522	0/0:16,0:16:42.01:0,42,384	0/0:13,0:13:33.01:0,33,302	0/0:14,0:14:33.02:0,33,302	0/0:28,0:28:78.03:0,78,714	0/0:9,0:9:24.01:0,24,219	1/1:4,9:13:30.07:326,30,0	1/1:2,25:27:72.21:825,72,0	1/1:5,9:14:27.08:312,27,0	0/0:6,0:6:15:0,15,137	0/0:26,0:26:69.02:0,69,627	0/0:5,0:5:12:0,12,110	0/0:19,0:19:45.02:0,45,412	1/1:2,22:24:41.75:734,42,0	1/1:2,33:35:96.28:1107,96,0	0/0:14,0:14:36.01:0,36,329
chr10	94148839	.	TG	T	268.46	PASS	AB=0.700;AC=1;AF=0.018;AN=56;BaseQRankSum=7.099;DP=1160;FS=8.967;HRun=1;HaplotypeScore=138.1312;InbreedingCoeff=-0.0182;MQ=56.45;MQ0=4;MQRankSum=-5.529;QD=5.48;ReadPosRankSum=-1.486;VQSLOD=-0.5660;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,21:49:99:343,0,272	0/0:15,0:15:45.15:0,45,700	0/0:41,0:13:25.42:0,25,388	0/0:47,0:17:45.14:0,45,660	0/0:31,0:31:93.32:0,93,1487	0/0:26,0:26:69.24:0,69,1097	0/0:44,0:44:99:0,132,2042	0/0:29,0:29:87.26:0,87,1315	0/0:55,0:55:99:0,163,2550	0/0:57,0:57:99:0,172,2690	0/0:20,0:20:60.20:0,60,949	0/0:40,0:40:99:0,120,1905	0/0:39,0:39:99:0,117,1857	0/0:52,0:52:99:0,144,2224	0/0:46,0:46:99:0,138,2191	0/0:51,0:51:99:0,154,2362	0/0:55,0:55:99:0,161,2535	0/0:35,0:35:99:0,105,1598	0/0:24,0:24:72.24:0,72,1130	0/0:33,0:33:99:0,99,1573	0/0:144,0:144:99:0,409,6422	0/0:45,0:45:99:0,135,2142	0/0:26,0:26:75.25:0,75,1181	0/0:45,0:45:99:0,126,1956	0/0:39,0:39:99:0,111,1735	0/0:36,0:36:99:0,108,1706	0/0:20,0:19:60.20:0,60,959	0/0:15,0:15:45.15:0,45,719
chr10	94149017	.	TATGTGTTC	T	730.86	PASS	AB=0.638;AC=1;AF=0.018;AN=56;BaseQRankSum=5.085;DP=1183;FS=18.015;HRun=0;HaplotypeScore=298.2847;InbreedingCoeff=-0.0153;MQ=57.79;MQ0=7;MQRankSum=-5.094;QD=19.75;ReadPosRankSum=-1.582;VQSLOD=1.3794;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,21:36:28.34:805,0,28	0/0:10,0:10:30.10:0,30,1169	0/0:51,0:22:35.82:0,36,987	0/0:46,0:23:48.12:0,48,1240	0/0:34,0:34:96.33:0,96,3772	0/0:25,0:25:63.64:0,64,2684	0/0:37,0:37:63.94:0,64,3881	0/0:44,0:44:99:0,120,3791	0/0:51,0:51:99:0,132,5137	0/0:65,0:65:99:0,166,6315	0/0:25,0:25:63.22:0,63,2683	0/0:52,0:52:99:0,147,5514	0/0:40,0:40:99:0,114,4443	0/0:51,0:51:99:0,135,5187	0/0:40,0:40:99:0,108,4205	0/0:64,0:64:99:0,187,7277	0/0:38,0:38:96.33:0,96,3785	0/0:31,0:31:68.66:0,69,2788	0/0:22,0:22:54.19:0,54,1854	0/0:32,0:32:78.26:0,78,3039	0/0:127,0:128:99:0,331,12135	0/0:43,0:43:99:0,111,4567	0/0:36,0:36:99:0,99,3671	0/0:46,0:46:99:0,126,4775	0/0:33,0:33:84.29:0,84,3199	0/0:54,0:54:99:0,160,5903	0/0:28,0:28:81.28:0,81,3328	0/0:19,0:19:48.16:0,48,1772
chr10	94149762	.	TCC	T	5046.79	PASS	AB=0.818;AC=47;AF=0.839;AN=56;BaseQRankSum=-5.949;DP=375;FS=24.141;HRun=12;HaplotypeScore=55.4508;InbreedingCoeff=0.7252;MQ=77.89;MQ0=3;MQRankSum=1.504;QD=16.39;ReadPosRankSum=6.258;VQSLOD=1.5070;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:6.33:0,6,36	1/1:1,1:2:5.98:52,6,0	0/0:35,0:21:31.29:0,31,348	0/0:15,0:12:17.23:0,17,121	1/1:3,10:14:28.62:270,29,0	1/1:6,11:18:29.79:286,30,0	1/1:2,8:11:23.79:225,24,0	1/1:7,1:8:2.94:30,3,0	1/1:3,8:11:21.03:213,21,0	1/1:10,7:17:24.02:243,24,0	1/1:6,14:21:35.98:351,36,0	1/1:2,11:13:27.04:274,27,0	1/1:4,12:16:36.06:365,36,0	1/1:4,9:14:23.42:218,23,0	1/1:7,9:16:24.01:241,24,0	1/1:5,9:14:24.02:244,24,0	0/0:11,0:11:17.01:0,17,141	1/1:2,12:14:30.04:304,30,0	1/1:5,1:6:9:91,9,0	1/1:14,2:17:14.71:132,15,0	1/1:5,2:7:6.01:61,6,0	1/1:3,7:10:18.03:183,18,0	1/1:9,12:22:47.83:467,48,0	1/1:4,6:10:15.47:152,15,0	1/1:6,2:9:14.74:133,15,0	1/1:9,4:14:17.51:134,18,0	1/1:7,8:15:27.01:274,27,0	0/1:7,2:9:15.83:100,0,16
chr10	94149773	.	CCA	C	1069.29	PASS	AB=0.976;AC=25;AF=0.446;AN=56;BaseQRankSum=5.882;DP=369;FS=28.492;HRun=0;HaplotypeScore=67.1128;InbreedingCoeff=-0.5659;MQ=74.90;MQ0=3;MQRankSum=0.609;QD=3.54;ReadPosRankSum=11.652;VQSLOD=-0.5541;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:11.89:0,12,89	0/1:3,1:4:34.78:35,0,38	0/0:33,0:18:10.40:0,10,395	0/1:17,0:13:6.57:7,0,99	0/1:16,0:16:61.15:61,0,87	0/1:20,0:20:67.55:68,0,133	0/1:14,0:14:38.75:39,0,79	0/0:7,0:7:8.34:0,8,103	1/1:10,0:10:16.70:73,17,0	0/1:19,0:19:37.50:38,0,250	0/1:21,0:21:98.52:122,0,99	1/1:12,0:12:0.83:78,1,0	0/1:17,0:17:33.33:90,0,33	0/1:13,0:13:15.87:34,0,16	0/1:15,0:15:31.60:32,0,70	0/1:12,0:12:23.60:24,0,49	0/0:8,0:8:19.85:0,20,125	0/1:16,1:17:65.90:77,0,66	0/1:7,0:7:38.15:51,0,38	0/1:8,1:9:42.43:42,0,43	0/1:7,0:7:18.79:19,0,103	0/1:10,0:10:30.24:34,0,30	0/1:24,1:25:99:139,0,130	0/1:8,1:9:16.47:55,0,16	0/1:7,0:7:13.23:35,0,13	0/0:14,0:14:6.03:0,6,177	0/1:12,0:12:23.56:49,0,24	0/1:9,0:9:29.49:29,0,68
chr10	94150186	.	AGAGTGTGTGTGTGTGT	A	2783.58	PASS	AB=1.000;AC=16;AF=0.308;AN=52;BaseQRankSum=1.195;DP=505;FS=35.106;HRun=0;HaplotypeScore=216.0365;InbreedingCoeff=0.2973;MQ=45.30;MQ0=17;MQRankSum=-2.973;QD=14.27;ReadPosRankSum=-1.121;VQSLOD=1.1812;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:86.17:0,86,2663	0/0:4,0:4:6.02:0,6,115	./.	0/0:2,0:1:2.37:0,2,8	./.	0/0:28,0:28:36.81:0,37,912	0/0:26,0:22:8.20:0,8,129	0/1:27,0:27:94.22:463,0,94	0/1:15,0:14:19.12:19,0,119	0/0:9,0:8:13.21:0,13,164	0/0:16,0:16:2.85:0,3,24	0/0:19,0:20:27.51:0,28,697	0/0:10,0:10:9.49:0,9,209	0/0:20,0:20:41.56:0,42,1044	0/1:22,0:22:82.03:159,0,82	0/1:13,0:13:68.14:68,0,136	0/0:36,0:34:26.78:0,27,1327	0/1:10,0:9:93.09:93,0,213	1/1:9,7:15:23.60:453,24,0	1/1:17,1:18:13.91:126,14,0	1/1:25,0:23:3.81:151,4,0	0/0:10,0:9:15.03:0,15,262	0/0:10,0:10:9.02:0,9,241	0/0:32,0:30:63.06:0,63,1595	0/0:21,0:20:0.02:0,0,168	1/1:18,0:15:35.71:773,36,0	1/1:4,15:18:12.78:537,13,0	0/1:12,0:10:99:109,0,129
chr10	94150188	.	AGTGTGTGTGTGTGT	A	2650.86	PASS	AB=0.779;AC=22;AF=0.440;AN=50;BaseQRankSum=0.057;DP=498;FS=28.443;HRun=0;HaplotypeScore=201.8781;InbreedingCoeff=0.3810;MQ=45.30;MQ0=18;MQRankSum=-2.798;QD=10.35;ReadPosRankSum=-1.783;VQSLOD=0.8136;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:45:71.26:0,71,2055	0/0:3,0:3:6:0,6,62	./.	./.	./.	0/0:23,0:28:15.67:0,16,598	1/1:13,0:21:2.74:12,3,0	1/1:16,11:27:29.78:534,30,0	0/1:11,0:14:11.47:49,0,11	0/0:9,0:7:6.02:0,6,68	1/1:11,5:16:0.47:1,0,0	0/0:17,0:20:24.59:0,25,482	0/0:3,0:8:6.49:0,6,131	0/0:18,0:20:38.55:0,39,823	1/1:12,6:22:9.23:234,9,0	0/1:8,2:13:11.24:166,0,11	0/0:12,0:34:17.80:0,18,1081	0/1:9,1:9:44.21:108,0,44	1/1:16,0:15:11.88:360,12,0	1/1:13,4:17:2.76:26,3,0	0/1:17,7:22:2.15:111,0,2	0/0:9,0:8:9.03:0,9,185	0/0:2,0:10:6.02:0,6,163	0/0:30,0:33:48.09:0,48,1199	0/1:11,10:20:8.52:9,0,43	1/1:12,6:16:20.96:678,21,0	1/1:19,0:18:10.25:421,10,0	0/1:9,3:10:76.90:109,0,77
chr10	94151372	.	A	AGC	2294.76	PASS	AB=0.888;AC=18;AF=0.321;AN=56;BaseQRankSum=-0.456;DP=464;FS=0.529;HRun=0;HaplotypeScore=84.4991;InbreedingCoeff=0.5772;MQ=67.82;MQ0=14;MQRankSum=-1.369;QD=12.89;ReadPosRankSum=-0.100;VQSLOD=2.8150;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:35.80:0,36,273	0/0:9,0:9:8.53:0,9,52	0/0:29,0:23:57.88:0,58,682	0/0:26,0:20:57.15:0,57,681	0/0:16,0:15:29.82:0,30,234	1/1:2,19:21:15.05:253,15,0	1/1:4,19:23:1.93:283,2,0	0/0:27,0:27:31.89:0,32,529	0/0:16,0:16:11.58:0,12,173	0/0:24,0:21:47.86:0,48,365	0/0:12,0:11:22.13:0,22,161	1/1:1,12:14:21.07:376,21,0	1/1:2,14:17:10.86:298,11,0	1/1:5,11:15:14.64:214,15,0	0/0:9,0:9:0.31:0,0,83	0/0:5,0:5:5.51:0,6,69	0/0:13,0:13:28.36:0,28,209	0/0:18,0:17:31.83:0,32,237	0/0:18,0:17:34.59:0,35,315	0/0:17,0:17:27.06:0,27,249	0/1:11,0:9:16.19:16,0,18	1/1:2,13:15:6.35:407,6,0	0/1:2,8:11:2.33:108,0,2	1/1:4,18:22:27.09:483,27,0	0/0:15,0:15:15.94:0,16,159	0/0:13,0:13:11.55:0,12,156	0/1:17,0:17:31.56:32,0,87	0/1:11,0:10:11.46:11,0,52
chr10	94151375	.	GCACACA	G	495.76	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.025;DP=537;FS=6.897;HRun=0;HaplotypeScore=137.3511;InbreedingCoeff=0.7610;MQ=62.09;MQ0=16;MQRankSum=-2.644;QD=14.16;ReadPosRankSum=1.497;VQSLOD=2.0439;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,10:21:17.97:268,18,0	0/0:10,0:15:15.02:0,15,208	0/0:28,0:22:11.80:0,12,234	0/0:25,0:19:15.05:0,15,302	0/0:23,0:22:12.02:0,12,134	0/0:20,0:21:15.05:0,15,404	0/0:22,0:22:21.54:0,22,575	0/0:28,0:28:21.05:0,21,278	0/0:19,0:19:12.03:0,12,219	0/0:27,0:23:40.74:0,41,685	0/0:16,0:16:7.88:0,8,65	0/0:14,0:14:27.09:0,27,762	0/0:18,0:18:20.11:0,20,577	0/0:14,0:13:15.04:0,15,347	0/0:15,0:19:12.50:0,12,220	0/0:7,0:7:4.57:0,5,97	1/1:7,5:13:18.53:344,19,0	0/0:18,0:18:24.04:0,24,365	0/0:18,0:22:24.07:0,24,554	0/0:16,0:21:14.64:0,15,255	0/0:12,0:13:9.50:0,10,172	0/0:15,0:15:30.10:0,30,800	0/0:10,0:11:11.89:0,12,263	0/0:21,0:21:33.11:0,33,878	0/0:17,0:24:11.77:0,12,168	0/0:14,0:18:26.11:0,26,601	0/0:14,0:20:29.88:0,30,685	0/0:5,0:15:18.06:0,18,483
chr10	94151657	.	TTTTG	T	4347.44	PASS	AB=0.864;AC=15;AF=0.268;AN=56;BaseQRankSum=12.307;DP=656;FS=10.859;HRun=0;HaplotypeScore=110.0376;InbreedingCoeff=0.7103;MQ=64.53;MQ0=9;MQRankSum=-0.245;QD=20.51;ReadPosRankSum=-0.256;VQSLOD=3.8328;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:69.19:115,0,69	0/0:13,0:12:33.11:0,33,772	0/1:37,0:18:13.32:13,0,197	0/0:31,0:15:4.22:0,4,208	0/0:34,0:34:69.24:0,69,1599	0/0:19,0:19:45.15:0,45,1058	0/0:19,0:19:39.13:0,39,903	1/1:16,13:29:39.10:572,39,0	0/0:31,0:31:81.28:0,81,1812	0/0:21,0:19:45.15:0,45,1056	0/0:12,0:12:21.07:0,21,514	0/0:24,0:24:63.21:0,63,1459	0/0:12,0:12:36.12:0,36,851	0/0:20,0:20:48.13:0,48,1003	0/0:21,0:21:48.16:0,48,1152	0/0:31,0:31:72.25:0,72,1668	0/0:31,0:31:81.12:0,81,1769	0/0:28,0:28:69.19:0,69,1548	1/1:8,18:25:54.14:819,54,0	1/1:3,11:13:27.09:434,27,0	1/1:3,11:13:18.06:299,18,0	0/0:16,0:16:42.14:0,42,974	0/0:20,0:20:42.14:0,42,1020	0/0:43,0:43:99:0,114,2775	0/0:18,0:18:51.16:0,51,1133	0/1:9,20:28:13.40:852,0,13	1/1:5,18:23:51.17:845,51,0	1/1:4,14:18:24.08:398,24,0
chr10	94151669	.	GT	G	372.58	PASS	AB=0.824;AC=2;AF=0.036;AN=56;BaseQRankSum=13.319;DP=655;FS=0.892;HRun=3;HaplotypeScore=89.2066;InbreedingCoeff=-0.0265;MQ=59.14;MQ0=8;MQRankSum=-3.183;QD=9.55;ReadPosRankSum=4.497;VQSLOD=1.1833;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,13:24:26.87:447,0,27	0/0:13,0:12:33.11:0,33,475	0/0:32,1:14:7.28:0,7,331	0/0:30,0:14:18.44:0,18,366	0/0:28,0:28:78.26:0,78,1101	0/0:20,0:20:60.20:0,60,854	0/0:21,0:21:60.19:0,60,835	0/0:25,0:25:39.15:0,39,435	0/0:34,0:34:99:0,99,1412	0/0:20,0:18:54.18:0,54,773	0/0:10,0:10:27.09:0,27,386	0/0:24,0:24:72.24:0,72,1024	0/0:14,0:14:42.14:0,42,599	0/0:21,0:21:63.20:0,63,879	0/0:21,0:21:63.20:0,63,878	0/0:33,0:33:93.30:0,93,1300	0/0:33,0:33:96.31:0,96,1352	0/0:32,0:33:95.76:0,96,1290	0/0:26,0:24:23.53:0,24,292	0/0:13,0:12:3.46:0,3,65	0/0:13,0:12:5:0,5,108	0/0:20,0:20:60.19:0,60,833	0/0:18,0:18:51.17:0,51,725	0/0:42,0:42:99:0,126,1789	0/0:19,0:19:57.19:0,57,817	0/0:27,0:26:17.13:0,17,239	0/0:25,0:25:6.08:0,6,202	0/1:15,0:15:2.59:3,0,14
chr10	94151673	.	GTTTGTT	G	474.86	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=7.777;DP=654;FS=5.786;HRun=0;HaplotypeScore=148.0913;InbreedingCoeff=0.7084;MQ=58.41;MQ0=8;MQRankSum=-2.651;QD=8.79;ReadPosRankSum=-3.369;VQSLOD=1.6107;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,8:23:53.98:569,54,0	0/0:13,0:12:33.11:0,33,1058	0/1:30,0:13:3.21:3,0,435	0/0:27,0:13:16.43:0,16,536	0/0:29,0:29:75.24:0,75,2280	0/0:22,0:22:63.20:0,63,1742	0/0:19,0:19:54.19:0,54,1569	0/0:22,0:22:35.51:0,36,410	0/0:34,0:34:96.32:0,96,2737	0/0:21,0:19:54.18:0,54,1638	0/0:9,0:9:21.07:0,21,726	0/0:23,0:23:66.22:0,66,2184	0/0:15,0:15:45.15:0,45,1392	0/0:21,0:21:54.18:0,54,1500	0/0:23,0:23:69.24:0,69,1869	0/0:32,0:32:96.32:0,96,2689	0/0:34,0:34:96.29:0,96,2711	0/0:35,0:35:99:0,99,2491	0/0:28,0:26:50.47:0,50,484	0/0:13,0:12:23.05:0,23,142	0/0:13,0:12:16.92:0,17,132	0/0:18,0:18:54.19:0,54,1608	0/0:17,0:17:48.16:0,48,1559	0/0:45,0:45:99:0,135,4194	0/0:19,0:19:54.14:0,54,1642	0/0:26,0:25:34.48:0,34,275	0/0:26,0:26:51.66:0,52,451	0/0:14,0:14:14.54:0,15,41
chr10	94151679	.	T	TG	308.85	PASS	AB=0.767;AC=1;AF=0.018;AN=56;BaseQRankSum=7.592;DP=657;FS=1.476;HRun=0;HaplotypeScore=91.8111;InbreedingCoeff=0.0357;MQ=59.27;MQ0=6;MQRankSum=0.735;QD=13.43;ReadPosRankSum=-4.890;VQSLOD=3.3458;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,7:23:14.95:383,0,15	0/0:12,0:11:33.11:0,33,461	0/0:25,0:14:10.71:0,11,374	0/0:27,0:15:42.05:0,42,530	0/0:30,0:30:81.22:0,81,1092	0/0:22,0:22:66.20:0,66,890	0/0:20,0:20:60.20:0,60,838	0/0:20,0:20:23.10:0,23,389	0/0:35,0:35:99:0,99,1353	0/0:19,0:18:54.18:0,54,745	0/0:9,0:9:24.07:0,24,320	0/0:24,0:24:72.23:0,72,991	0/0:15,0:15:45.15:0,45,629	0/0:21,0:21:63.20:0,63,864	0/0:25,0:25:75.24:0,75,1033	0/0:33,0:33:96.31:0,96,1328	0/0:33,0:33:98.35:0,98,1331	0/0:36,0:36:99:0,102,1319	0/0:29,0:28:39.76:0,40,566	0/0:13,0:12:31.40:0,31,224	0/0:15,0:14:29.51:0,30,235	0/0:19,0:19:57.18:0,57,782	0/0:17,0:17:48.16:0,48,667	0/0:47,0:47:99:0,141,1970	0/0:19,0:19:57.14:0,57,760	0/0:27,0:26:41.05:0,41,373	0/0:28,0:28:76.62:0,77,645	0/0:14,0:14:23.40:0,23,136
chr10	94151692	.	TTGC	T	455.43	PASS	AB=0.947;AC=3;AF=0.054;AN=56;BaseQRankSum=5.351;DP=622;FS=3.854;HRun=0;HaplotypeScore=102.8899;InbreedingCoeff=0.6531;MQ=59.93;MQ0=2;MQRankSum=-4.731;QD=11.68;ReadPosRankSum=-0.098;VQSLOD=3.0053;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:21:39.06:546,39,0	0/0:11,0:10:26.65:0,27,424	0/0:25,0:19:49.66:0,50,831	0/0:26,0:21:48.14:0,48,867	0/0:29,0:29:33.11:0,33,639	0/0:21,0:21:48.14:0,48,903	0/0:21,0:21:48.16:0,48,953	0/0:18,0:18:30.02:0,30,470	0/0:31,0:31:75.26:0,75,1541	0/0:19,0:18:36.11:0,36,694	0/0:10,0:10:21.05:0,21,390	0/0:26,0:26:66.20:0,66,1258	0/0:18,0:18:45.15:0,45,926	0/0:20,0:20:57.17:0,57,1136	0/0:22,0:22:57.17:0,57,1104	0/0:28,0:28:66.17:0,66,1207	0/0:31,0:31:81.19:0,81,1567	0/0:31,0:31:72.25:0,72,1464	0/0:24,0:23:42.13:0,42,784	0/0:13,0:12:30.10:0,30,614	0/0:18,0:17:36.09:0,36,667	0/0:18,0:18:42.13:0,42,803	0/1:17,1:18:14.19:14,0,434	0/0:45,0:45:99:0,117,2310	0/0:16,0:16:30.10:0,30,617	0/0:22,0:21:41.84:0,42,756	0/0:28,0:28:66.10:0,66,1265	0/0:12,0:12:33.11:0,33,584
chr10	94151951	.	A	ATGTGTGTGTGTG	5418.71	PASS	AB=0.984;AC=40;AF=0.833;AN=48;BaseQRankSum=-0.600;DP=393;FS=3.748;HRun=0;HaplotypeScore=159.0698;InbreedingCoeff=-0.0606;MQ=49.51;MQ0=8;MQRankSum=-2.828;QD=15.44;ReadPosRankSum=0.203;VQSLOD=3.8932;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:23:5.49:5,0,194	1/1:7,0:7:6.02:242,6,0	./.	./.	0/1:14,0:15:0:0,0,0	1/1:8,0:12:6.02:245,6,0	0/1:16,0:16:18.72:72,0,19	0/1:23,0:23:9.12:9,0,108	1/1:6,0:6:2.06:139,2,0	1/1:11,0:15:27.09:852,27,0	0/1:15,0:13:0:0,0,0	1/1:7,5:11:1.82:5,2,0	1/1:9,1:11:11.91:380,12,0	./.	1/1:6,0:10:3.01:153,3,0	1/1:5,0:5:3.01:153,3,0	1/1:33,0:35:35.47:1081,35,0	1/1:13,0:18:27.09:1147,27,0	0/1:13,0:13:2.23:37,0,2	1/1:12,0:12:3.01:32,3,0	0/1:17,0:15:45.94:46,0,62	./.	1/1:11,0:11:2.80:173,3,0	1/1:14,8:22:5.68:346,6,0	1/1:8,0:9:6.02:140,6,0	0/1:13,0:14:43.27:43,0,95	1/1:11,0:11:6:90,6,0	1/1:10,0:8:3.01:30,3,0
chr10	94151996	.	C	CGCGT	426.07	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=6.553;DP=434;FS=4.011;HRun=0;HaplotypeScore=117.7929;InbreedingCoeff=0.1301;MQ=52.43;MQ0=8;MQRankSum=-6.214;QD=2.70;ReadPosRankSum=1.741;VQSLOD=1.9344;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:8.98:0,9,72	0/1:12,0:10:19.17:19,0,102	0/1:3,0:3:19.98:20,0,22	0/0:4,0:3:5.02:0,5,39	0/1:25,0:25:26.32:26,0,114	0/0:12,0:12:24.47:0,24,242	0/0:17,0:16:33.94:0,34,399	0/0:19,0:17:29.93:0,30,253	0/0:12,0:12:0.62:0,1,86	0/0:23,0:21:29.65:0,30,362	0/0:12,0:11:11.56:0,12,111	0/0:13,0:12:17.06:0,17,182	0/0:13,0:12:15.78:0,16,163	./.	0/0:10,0:9:14.98:0,15,124	1/1:7,0:7:3.46:24,3,0	1/1:8,22:31:7.11:316,7,0	0/0:19,0:19:23.35:0,23,246	0/0:23,0:21:31.10:0,31,357	0/1:19,0:19:6.74:7,0,116	0/1:16,0:15:14.44:14,0,80	0/0:16,0:16:27.01:0,27,294	0/0:23,0:23:45.48:0,45,521	0/0:15,0:15:18.64:0,19,217	0/0:20,0:20:17.90:0,18,139	0/1:18,0:18:28.14:28,0,243	0/1:15,0:14:71.99:97,0,72	1/1:11,0:9:2.99:23,3,0
chr10	94152645	.	CA	C	1058.54	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.391;DP=609;FS=0.000;HRun=9;HaplotypeScore=60.7230;InbreedingCoeff=0.8460;MQ=76.22;MQ0=0;MQRankSum=-2.819;QD=22.52;ReadPosRankSum=0.573;VQSLOD=4.2771;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,44:47:99:1153,126,0	0/0:5,0:5:12.04:0,12,138	0/0:19,0:20:18.91:0,19,398	0/0:9,0:8:12.02:0,12,125	0/0:27,0:27:78.22:0,78,891	0/0:25,0:25:60.18:0,60,692	0/0:19,0:19:57.15:0,57,646	0/0:20,0:19:57.16:0,57,651	0/0:18,0:18:45.13:0,45,519	0/0:19,0:19:42.12:0,42,485	0/0:15,0:15:45.07:0,45,495	0/0:29,0:29:81.23:0,81,926	0/0:25,0:25:69.18:0,69,774	0/0:23,0:23:69.19:0,69,787	0/0:35,0:35:96.29:0,96,1108	0/0:25,0:24:72.21:0,72,831	0/0:25,0:25:75.21:0,75,856	0/0:18,0:18:54.11:0,54,597	0/0:21,0:21:63.16:0,63,707	0/0:11,0:11:33.08:0,33,363	0/0:23,0:23:66.20:0,66,762	0/0:30,0:30:72.20:0,72,822	0/0:17,0:18:53.99:0,54,603	0/0:24,0:24:63.19:0,63,723	0/0:15,0:15:36.09:0,36,406	0/0:29,0:29:72.18:0,72,804	0/0:23,0:23:51.15:0,51,589	0/0:10,1:11:5.63:0,6,319
chr10	94152850	.	GT	G	646.62	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.409;DP=422;FS=5.928;HRun=6;HaplotypeScore=41.4277;InbreedingCoeff=0.9289;MQ=85.34;MQ0=0;MQRankSum=-3.047;QD=25.86;ReadPosRankSum=1.835;VQSLOD=3.6397;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:69.17:741,69,0	0/0:4,0:4:9.03:0,9,118	0/0:16,0:16:39.06:0,39,461	0/0:11,0:11:29.99:0,30,348	0/0:18,0:18:54.18:0,54,710	0/0:12,0:12:33.11:0,33,433	0/0:9,0:9:27.09:0,27,355	0/0:36,0:36:99:0,99,1277	0/0:15,0:15:45.14:0,45,578	0/0:18,0:18:51.17:0,51,669	0/0:14,0:14:39.12:0,39,502	0/0:8,0:8:24.07:0,24,303	0/0:18,0:18:39.11:0,39,496	0/0:10,0:10:24.04:0,24,283	0/0:10,0:10:27.09:0,27,355	0/0:13,0:13:33.11:0,33,434	0/0:27,0:27:75.18:0,75,950	0/0:27,0:27:78.21:0,78,1005	0/0:18,0:18:51.16:0,51,656	0/0:22,0:22:63.18:0,63,802	0/0:9,0:9:21.07:0,21,276	0/0:11,0:11:33.11:0,33,434	0/0:9,0:9:24.07:0,24,302	0/0:14,0:14:39.11:0,39,498	0/0:11,0:11:30.09:0,30,383	0/0:15,0:15:36.10:0,36,449	0/0:14,0:14:36.12:0,36,472	0/0:8,0:8:21.07:0,21,276
chr10	94153444	.	GTTAA	G	574.12	PASS	AB=0.833;AC=3;AF=0.054;AN=56;BaseQRankSum=5.535;DP=407;FS=1.029;HRun=0;HaplotypeScore=66.9165;InbreedingCoeff=0.5357;MQ=68.73;MQ0=0;MQRankSum=0.044;QD=22.96;ReadPosRankSum=0.148;VQSLOD=2.7564;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,15:20:39.13:659,39,0	0/0:8,0:8:18.06:0,18,455	0/1:4,0:5:20.17:20,0,24	0/0:5,0:5:0:0,0,0	0/0:28,0:28:78.26:0,78,1887	0/0:25,0:25:72.25:0,72,1821	0/0:10,0:10:24.07:0,24,531	0/0:26,0:26:63.20:0,63,1472	0/0:10,0:10:24.07:0,24,519	0/0:15,0:15:42.14:0,42,1044	0/0:25,0:25:60.20:0,60,1423	0/0:11,0:11:27.08:0,27,626	0/0:18,0:18:39.13:0,39,976	0/0:12,0:12:36.12:0,36,826	0/0:13,0:13:33.11:0,33,835	0/0:12,0:12:30.10:0,30,732	0/0:10,0:10:18.02:0,18,323	0/0:24,0:24:63.22:0,63,1489	0/0:12,0:12:21.07:0,21,529	0/0:17,0:17:40.02:0,40,964	0/0:2,0:2:6.02:0,6,152	0/0:6,0:6:12.04:0,12,304	0/0:18,0:18:42.14:0,42,1030	0/0:1,0:1:3.01:0,3,76	0/0:16,0:16:45.15:0,45,1107	0/0:21,0:21:60.21:0,60,1493	0/0:22,0:22:57.20:0,57,1436	0/0:15,0:15:39.13:0,39,983
chr10	94154391	.	C	CA	2891.84	PASS	AB=0.795;AC=21;AF=0.375;AN=56;BaseQRankSum=-4.538;DP=662;FS=2.189;HRun=12;HaplotypeScore=79.9994;InbreedingCoeff=0.4844;MQ=69.83;MQ0=2;MQRankSum=2.887;QD=9.80;ReadPosRankSum=-0.633;VQSLOD=3.0237;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:30:50.90:199,51,0	0/1:3,4:7:28.79:73,0,29	0/1:20,0:17:5.11:9,0,5	0/1:10,0:9:15.78:21,0,16	0/1:7,26:33:32.44:480,0,32	0/0:25,0:27:58.66:0,59,422	0/0:17,0:21:41.83:0,42,280	0/0:30,0:32:42.75:0,43,295	1/1:4,21:25:20.16:357,20,0	1/1:8,22:32:41.03:546,41,0	1/1:4,15:20:36.22:307,36,0	0/0:16,0:17:6.68:0,7,163	0/0:23,0:23:44.60:0,45,325	0/0:35,1:39:55.89:0,56,401	1/1:2,18:20:20.15:353,20,0	0/1:5,14:20:4.72:152,0,5	0/0:22,0:24:42.72:0,43,296	1/1:9,6:15:5.11:200,5,0	0/0:18,1:19:6.58:0,7,211	0/0:39,2:48:41.80:0,42,559	0/0:18,1:19:12.56:0,13,255	0/0:20,1:24:24.57:0,25,313	0/1:22,2:25:5.68:6,0,280	0/1:10,2:12:11.37:11,0,92	1/1:3,20:24:23.22:372,23,0	0/0:21,0:21:29.71:0,30,219	0/0:29,0:32:42.45:0,42,421	0/0:19,0:21:57.04:0,57,402
chr10	94154402	.	A	AAG	822.36	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.925;DP=664;FS=1.745;HRun=0;HaplotypeScore=101.1574;InbreedingCoeff=0.9562;MQ=67.26;MQ0=2;MQRankSum=-0.040;QD=23.50;ReadPosRankSum=2.087;VQSLOD=4.4677;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,23:34:60.13:917,60,0	0/0:7,0:7:20.21:0,20,157	0/0:18,0:14:25.17:0,25,217	0/0:8,0:7:11.87:0,12,108	0/0:36,0:36:76.63:0,77,502	0/0:30,0:30:72.15:0,72,831	0/0:20,0:20:57.04:0,57,620	0/0:25,0:25:63.08:0,63,676	0/0:24,0:24:38.93:0,39,223	0/0:33,0:33:67.65:0,68,470	0/0:19,0:19:19.65:0,20,150	0/0:20,0:20:46.60:0,47,480	0/0:22,0:22:56.17:0,56,639	0/0:30,0:30:75.13:0,75,856	0/0:22,0:22:41.95:0,42,238	0/0:19,0:19:31.35:0,31,211	0/0:26,0:26:59.70:0,60,621	0/0:17,0:17:36.79:0,37,231	0/0:17,0:17:47.81:0,48,509	0/0:45,0:45:99:0,115,1269	0/0:23,0:23:53.83:0,54,578	0/0:28,0:28:71.80:0,72,737	0/0:30,0:30:77.56:0,78,801	0/0:13,0:13:26.79:0,27,278	0/0:24,0:24:33.46:0,33,238	0/0:21,0:21:42.09:0,42,475	0/0:31,0:31:68.51:0,69,793	0/0:21,0:21:60.13:0,60,720
chr10	94155967	.	C	CT	18585.57	PASS	AB=0.905;AC=37;AF=0.661;AN=56;BaseQRankSum=8.202;DP=695;FS=21.270;HRun=1;HaplotypeScore=88.1520;InbreedingCoeff=0.9112;MQ=81.53;MQ0=0;MQRankSum=-4.879;QD=41.03;ReadPosRankSum=6.159;VQSLOD=2.7965;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1387	1/1:1,16:17:48.16:719,48,0	0/0:30,0:30:78.23:0,78,991	0/0:24,0:24:66.19:0,66,841	1/1:0,20:20:60.20:899,60,0	1/1:1,17:18:51.17:764,51,0	1/1:0,25:25:72.24:1079,72,0	0/0:39,0:39:99:0,108,1388	1/1:0,25:25:72.24:1079,72,0	1/1:1,21:22:63.21:945,63,0	1/1:0,21:21:63.21:944,63,0	1/1:1,29:30:84.28:1259,84,0	1/1:0,21:21:57.19:853,57,0	1/1:0,26:26:78.26:1169,78,0	1/1:0,39:39:99:1619,108,0	1/1:1,19:20:57.19:855,57,0	1/1:2,29:31:84.28:1259,84,0	1/1:1,21:21:66.20:966,66,0	0/0:29,0:29:81.24:0,81,1026	0/0:27,0:27:81.26:0,81,1051	0/0:29,0:29:87.23:0,87,1093	1/1:1,20:21:60.20:899,60,0	1/1:1,19:20:54.18:809,54,0	1/1:0,36:36:99:1619,108,0	1/1:1,19:20:54.18:810,54,0	0/1:17,2:19:38.80:39,0,533	0/0:23,0:23:69.21:0,69,882	0/0:3,0:3:9.03:0,9,117
chr10	94156104	.	A	AG	21394.11	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-16.426;DP=794;FS=3.934;HRun=1;HaplotypeScore=69.2408;InbreedingCoeff=0.9992;MQ=76.22;MQ0=0;MQRankSum=-0.857;QD=41.46;ReadPosRankSum=7.227;VQSLOD=4.4542;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,1674	1/1:1,9:10:27.09:405,27,0	0/0:22,0:22:55.05:0,55,718	0/0:19,0:19:57.09:0,57,704	1/1:0,40:40:99:1769,120,0	1/1:0,20:20:54.18:809,54,0	1/1:0,26:26:78.26:1169,78,0	0/0:29,0:29:84.26:0,84,1066	1/1:2,28:30:78.26:1169,78,0	1/1:2,38:40:99:1708,114,0	1/1:0,26:26:75.25:1124,75,0	1/1:1,28:29:78.26:1151,78,0	1/1:1,33:34:90.30:1332,90,0	1/1:1,27:28:75.21:1099,75,0	1/1:0,34:34:93.32:1394,93,0	1/1:0,22:22:66.22:989,66,0	1/1:0,34:34:99:1484,99,0	1/1:0,14:14:33.11:495,33,0	0/0:27,0:27:81.26:0,81,1052	0/0:35,0:35:99:0,105,1334	0/0:40,0:40:99:0,117,1446	1/1:1,33:34:99:1484,99,0	1/1:0,30:30:81.27:1206,81,0	1/1:0,34:34:90.30:1349,90,0	1/1:1,30:31:84.28:1259,84,0	0/0:41,2:43:39.46:0,39,1505	0/0:13,0:13:39.11:0,39,489	0/0:7,0:7:21.07:0,21,273
chr10	94157665	.	G	GT	9432.82	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=17.334;DP=558;FS=1.048;HRun=1;HaplotypeScore=137.9608;InbreedingCoeff=0.9944;MQ=83.73;MQ0=1;MQRankSum=-5.122;QD=29.02;ReadPosRankSum=6.738;VQSLOD=4.4105;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.23:0,69,964	1/1:0,9:9:27.08:322,27,0	0/0:19,0:16:44.76:0,45,573	0/0:35,0:33:78.79:0,79,992	1/1:3,22:25:60.20:745,60,0	1/1:1,19:20:50.06:631,50,0	1/1:2,14:16:32.98:379,33,0	0/0:36,0:36:99:0,105,1449	1/1:3,11:14:32.12:398,32,0	1/1:4,28:32:81.33:948,81,0	1/1:0,20:20:52.95:619,53,0	1/1:3,18:21:44.15:549,44,0	1/1:1,13:14:32.11:403,32,0	1/1:2,11:13:31.58:377,32,0	1/1:2,20:22:54.63:640,55,0	1/1:1,13:14:26.65:319,27,0	1/1:1,11:12:18.06:342,18,0	1/1:2,12:14:35.62:435,36,0	0/0:16,0:16:48.15:0,48,651	0/0:29,0:29:87.28:0,87,1197	0/0:9,0:9:27.08:0,27,358	1/1:2,15:17:34.99:440,35,0	1/1:2,19:21:55.58:687,56,0	1/1:2,10:12:33.97:391,34,0	1/1:2,27:29:66.20:807,66,0	0/0:23,2:25:13.91:0,14,899	0/0:31,0:31:93.31:0,93,1298	0/0:8,0:8:21.07:0,21,294
chr10	94158082	.	A	AT	12464.34	PASS	AB=0.870;AC=37;AF=0.661;AN=56;BaseQRankSum=-0.850;DP=580;FS=3.210;HRun=0;HaplotypeScore=65.4151;InbreedingCoeff=0.9036;MQ=72.65;MQ0=1;MQRankSum=-1.401;QD=34.82;ReadPosRankSum=6.665;VQSLOD=4.0928;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1614	1/1:0,5:5:15.05:219,15,0	0/0:21,0:21:59.94:0,60,680	0/0:15,0:14:28.25:0,28,351	1/1:1,20:21:51.10:719,51,0	1/1:0,21:21:57.19:833,57,0	1/1:0,19:19:45.15:658,45,0	0/0:35,0:35:99:0,105,1391	1/1:0,10:10:27.09:395,27,0	1/1:0,26:26:78.26:1136,78,0	1/1:0,19:19:47.73:616,48,0	1/1:2,10:12:6.69:208,7,0	1/1:0,14:14:36.12:526,36,0	1/1:0,13:13:27.09:395,27,0	1/1:0,18:18:51.17:746,51,0	1/1:0,29:29:78.26:1141,78,0	1/1:0,35:35:96.32:1403,96,0	1/1:0,11:11:27.09:394,27,0	0/0:17,0:17:48.05:0,48,628	0/0:20,0:20:60.18:0,60,801	0/0:28,0:28:81.24:0,81,1088	1/1:0,25:25:66.14:938,66,0	1/1:2,16:18:36.12:526,36,0	1/1:0,23:23:60.20:877,60,0	1/1:0,19:18:45.15:658,45,0	0/1:17,3:20:74.64:75,0,542	0/0:36,0:36:99:0,105,1408	0/0:9,0:9:27.05:0,27,327
chr10	94158376	.	GA	G	5162.91	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=9.893;DP=533;FS=0.782;HRun=9;HaplotypeScore=52.3756;InbreedingCoeff=0.9127;MQ=68.09;MQ0=9;MQRankSum=0.276;QD=17.68;ReadPosRankSum=2.663;VQSLOD=4.9355;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:99:0,111,1258	1/1:1,3:4:6:55,6,0	0/0:35,0:11:13.35:0,13,195	0/1:31,0:14:4.03:4,0,132	1/1:1,15:16:42.02:384,42,0	1/1:1,18:19:51.03:467,51,0	1/1:1,16:17:41.06:363,41,0	0/0:27,0:25:63.14:0,63,712	1/1:2,9:11:24.01:220,24,0	1/1:0,18:17:51.01:461,51,0	1/1:3,21:24:54.02:493,54,0	1/1:0,13:13:36.02:329,36,0	1/1:1,14:15:27.01:247,27,0	1/1:3,11:14:33.02:302,33,0	1/1:1,4:4:9:82,9,0	1/1:1,10:11:24.01:220,24,0	0/0:29,0:29:63.19:0,63,727	1/1:6,12:17:27.01:247,27,0	0/0:26,0:23:66.15:0,66,743	0/0:16,0:16:45.13:0,45,519	0/0:6,0:5:13.28:0,13,141	1/1:4,8:12:20.90:192,21,0	1/1:5,15:19:33.02:302,33,0	1/1:3,15:17:32.86:301,33,0	1/1:2,24:25:54.03:494,54,0	0/0:24,1:25:29.94:0,30,611	0/0:25,0:24:57.17:0,57,658	0/0:7,0:6:18.05:0,18,208
chr10	94158742	.	GT	G	9164.32	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=13.276;DP=496;FS=1.719;HRun=7;HaplotypeScore=53.1940;InbreedingCoeff=0.9765;MQ=70.90;MQ0=0;MQRankSum=-4.032;QD=27.27;ReadPosRankSum=3.631;VQSLOD=5.4767;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:24.08:0,24,302	1/1:0,13:13:35.94:367,36,0	0/0:10,0:10:7.75:0,8,113	0/0:8,0:8:14.23:0,14,137	1/1:1,35:36:99:1003,99,0	1/1:1,15:16:45.10:459,45,0	1/1:1,4:5:9.02:92,9,0	0/0:28,0:28:66.20:0,66,818	1/1:3,14:17:39.08:398,39,0	1/1:0,27:27:78.18:795,78,0	1/1:3,32:35:93.20:943,93,0	1/1:0,14:14:42.10:428,42,0	1/1:1,18:19:48.11:490,48,0	1/1:0,16:16:48.11:490,48,0	1/1:0,15:15:42.10:428,42,0	1/1:0,15:15:42.10:429,42,0	1/1:0,14:14:42.10:428,42,0	1/1:2,10:12:30.06:303,30,0	0/0:10,0:10:30.10:0,30,378	0/0:24,0:24:72.23:0,72,906	0/0:13,0:13:36.12:0,36,453	1/1:1,19:20:45.10:459,45,0	1/1:2,21:23:60.14:612,60,0	1/1:0,10:10:27.06:275,27,0	1/1:2,27:29:75.17:765,75,0	0/0:23,0:23:66.21:0,66,830	0/0:23,0:22:69.22:0,69,868	0/0:13,0:13:27.09:0,27,340
chr10	94158929	.	G	GA	12508.58	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=14.500;DP=584;FS=1.930;HRun=5;HaplotypeScore=112.6917;InbreedingCoeff=0.9843;MQ=74.07;MQ0=0;MQRankSum=-5.404;QD=33.90;ReadPosRankSum=3.119;VQSLOD=3.9855;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:30.07:0,30,320	1/1:0,7:7:21.07:276,21,0	0/0:20,0:20:15.24:0,15,386	0/0:12,0:12:17.94:0,18,167	1/1:5,18:23:45.15:591,45,0	1/1:2,24:26:72.19:927,72,0	1/1:2,13:15:42.08:532,42,0	0/0:31,0:31:78.15:0,78,806	1/1:7,16:23:48.16:631,48,0	1/1:2,33:35:99:1381,105,0	1/1:5,24:29:78.21:1004,78,0	1/1:8,19:27:72.11:866,72,0	1/1:3,23:26:75.12:944,75,0	1/1:4,28:32:87.15:1098,87,0	1/1:3,21:24:69.16:886,69,0	1/1:5,22:27:69.19:889,69,0	1/1:1,8:9:24.08:315,24,0	1/1:2,2:4:9.03:117,9,0	0/0:13,0:13:33.08:0,33,355	0/0:26,0:26:69.17:0,69,741	0/0:31,0:31:81.20:0,81,870	1/1:3,11:14:36.03:435,36,0	1/1:2,16:18:45.15:592,45,0	1/1:2,11:13:30.10:394,30,0	1/1:1,16:17:48.16:631,48,0	0/0:25,1:26:29.68:0,30,663	0/0:39,0:39:99:0,111,1183	0/0:6,0:6:15.04:0,15,161
chr10	94158975	.	T	TAA	20111.49	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=19.054;DP=610;FS=22.469;HRun=1;HaplotypeScore=154.8303;InbreedingCoeff=0.9809;MQ=81.49;MQ0=0;MQRankSum=-12.402;QD=51.57;ReadPosRankSum=-0.508;VQSLOD=2.8570;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:30.10:0,30,459	1/1:1,10:11:33.11:627,33,0	0/0:20,0:20:60.14:0,60,849	0/0:22,0:22:61.42:0,61,877	1/1:2,31:33:93.23:1695,93,0	1/1:6,19:24:63.15:1141,63,0	1/1:2,11:14:42.11:765,42,0	0/0:34,0:34:99:0,102,1514	1/1:3,27:30:84.25:1577,84,0	1/1:10,26:35:99:1813,99,0	1/1:1,20:22:60.15:1087,60,0	1/1:6,24:31:84.18:1486,84,0	1/1:4,21:26:75.20:1345,75,0	1/1:1,26:27:78.23:1463,78,0	1/1:1,15:16:48.16:919,48,0	1/1:1,23:24:72.21:1352,72,0	1/1:0,7:10:27.06:454,27,0	1/1:0,3:3:9.03:173,9,0	0/0:17,0:17:51.17:0,51,779	0/0:23,0:23:63.21:0,63,963	0/0:26,0:26:75.22:0,75,1104	1/1:2,16:19:54.07:966,54,0	1/1:2,25:27:75.21:1404,75,0	1/1:3,9:12:29.71:567,30,0	1/1:3,21:23:69.19:1277,69,0	0/0:22,1:23:8.43:0,8,902	0/0:37,0:37:99:0,108,1648	0/0:8,0:8:24.05:0,24,323
chr10	94159406	.	AT	A	3814.55	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.620;DP=468;FS=5.408;HRun=8;HaplotypeScore=44.4814;InbreedingCoeff=0.9867;MQ=69.95;MQ0=0;MQRankSum=0.598;QD=24.93;ReadPosRankSum=3.404;VQSLOD=4.2740;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.14:0,54,638	1/1:0,9:9:24.04:232,24,0	0/0:4,0:4:11.77:0,12,114	0/0:12,0:12:20.99:0,21,214	1/1:0,29:29:84.14:811,84,0	0/0:18,0:18:48.15:0,48,580	0/0:8,0:8:24.06:0,24,277	0/0:23,0:23:63.18:0,63,742	1/1:1,17:18:39.06:377,39,0	1/1:1,10:11:30.05:290,30,0	1/1:0,22:22:60.04:570,60,0	0/0:17,0:17:45.14:0,45,544	0/0:14,0:14:42.12:0,42,497	0/0:11,0:11:30.08:0,30,351	1/1:2,7:9:21.03:203,21,0	1/1:1,19:20:57.09:551,57,0	0/0:21,0:21:60.16:0,60,702	1/1:3,4:7:12.02:116,12,0	0/0:23,0:23:63.16:0,63,737	0/0:29,0:29:69.21:0,69,833	0/0:15,0:15:42.12:0,42,496	0/0:13,0:13:39.11:0,39,459	0/0:19,0:19:51.16:0,51,615	0/0:7,0:7:21.06:0,21,254	1/1:1,27:28:69.11:666,69,0	0/0:26,0:26:66.17:0,66,776	0/0:27,0:27:75.22:0,75,894	0/0:7,0:7:21.06:0,21,254
chr10	94160758	.	G	GA	2828.26	PASS	AB=0.944;AC=24;AF=0.429;AN=56;BaseQRankSum=-4.913;DP=542;FS=3.143;HRun=11;HaplotypeScore=85.5548;InbreedingCoeff=0.7808;MQ=73.29;MQ0=7;MQRankSum=-1.221;QD=14.21;ReadPosRankSum=1.884;VQSLOD=4.2161;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,10:14:12.38:303,12,0	1/1:3,3:6:9.01:86,9,0	0/0:77,0:46:3.59:0,4,156	0/0:67,0:25:8.07:0,8,66	1/1:8,17:25:30.76:435,31,0	0/0:16,0:16:41.68:0,42,320	0/0:7,0:7:17.16:0,17,123	0/0:28,0:29:59.08:0,59,437	1/1:1,16:17:36.07:365,36,0	1/1:6,17:24:57.25:547,57,0	1/1:4,11:16:34.71:314,35,0	0/0:14,0:14:32.83:0,33,255	0/0:13,0:14:28.88:0,29,215	0/0:16,1:17:2.32:0,2,198	1/1:4,5:10:14.82:136,15,0	1/1:5,18:25:42.56:581,43,0	1/1:12,0:12:9.24:95,9,0	1/1:1,3:4:6.01:61,6,0	0/0:19,0:19:41.78:0,42,316	0/0:21,0:21:44.77:0,45,347	0/0:7,0:7:17.93:0,18,139	0/0:13,0:14:25.84:0,26,191	0/0:12,0:12:32.87:0,33,254	0/1:7,1:8:6.53:7,0,139	1/1:4,9:14:11.86:106,12,0	0/1:24,0:24:1.16:1,0,351	0/0:23,0:26:48.62:0,49,348	0/0:2,0:2:5.99:0,6,52
chr10	94160769	.	A	AC	377.41	PASS	AB=0.997;AC=17;AF=0.304;AN=56;BaseQRankSum=9.577;DP=463;FS=2.704;HRun=3;HaplotypeScore=74.0845;InbreedingCoeff=0.3246;MQ=73.87;MQ0=5;MQRankSum=-0.847;QD=1.83;ReadPosRankSum=2.870;VQSLOD=-0.5303;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:7.65:58,0,8	1/1:3,0:3:4.94:16,5,0	0/1:52,1:29:12.30:12,0,185	0/0:39,0:15:13.20:0,13,129	0/1:21,0:21:33.33:33,0,37	0/0:17,0:18:53.89:0,54,573	0/0:8,0:8:23.88:0,24,229	0/0:29,0:29:80.99:0,81,836	1/1:17,0:17:23.90:86,24,0	0/1:23,0:23:10.84:11,0,109	0/1:16,0:16:33.24:33,0,49	0/0:12,0:12:35.87:0,36,385	0/0:12,0:12:32.98:0,33,343	0/0:13,0:13:29.26:0,29,332	1/1:7,0:7:1.91:29,2,0	0/1:26,0:26:57.17:57,0,107	1/1:3,7:11:11.44:192,11,0	1/1:3,0:3:4.05:14,4,0	0/0:20,0:20:48.05:0,48,501	0/0:18,0:18:51.12:0,51,575	0/0:8,0:8:24.05:0,24,265	0/0:13,0:13:35.98:0,36,377	0/0:13,0:13:39.03:0,39,425	0/0:9,0:9:16.63:0,17,243	0/1:13,0:13:4.35:4,0,49	0/0:22,0:22:51.93:0,52,635	0/0:20,0:20:56.19:0,56,544	0/0:2,0:2:6.01:0,6,60
chr10	94162685	.	TA	T	9647.75	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=12.002;DP=563;FS=4.573;HRun=9;HaplotypeScore=56.5219;InbreedingCoeff=0.9919;MQ=63.91;MQ0=1;MQRankSum=-1.520;QD=23.53;ReadPosRankSum=3.426;VQSLOD=5.8031;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:34:87.04:796,87,0	1/1:1,8:9:21.01:192,21,0	0/0:15,0:10:23.99:0,24,247	0/0:14,0:9:14.91:0,15,184	1/1:2,21:23:60.03:549,60,0	1/1:2,21:23:25.41:487,25,0	1/1:2,12:14:36.02:329,36,0	1/1:5,18:22:50.99:457,51,0	1/1:1,20:21:60.03:549,60,0	1/1:4,15:20:45.01:411,45,0	1/1:1,18:19:51.03:467,51,0	1/1:1,14:15:39.02:357,39,0	1/1:0,14:14:42.02:384,42,0	1/1:0,24:24:69.04:632,69,0	1/1:0,15:15:45.02:412,45,0	1/1:3,20:23:60.02:549,60,0	1/1:3,23:26:69.03:632,69,0	1/1:3,9:12:21.01:192,21,0	0/0:21,0:21:60.16:0,60,676	0/0:36,0:36:96.29:0,96,1108	0/0:15,0:15:42.11:0,42,475	1/1:0,28:28:72.03:659,72,0	1/1:2,18:20:50.98:467,51,0	1/1:1,17:18:48.03:439,48,0	1/1:4,20:24:60.01:549,60,0	0/0:23,1:25:38.56:0,39,679	0/0:27,0:27:75.22:0,75,865	1/1:0,5:5:15.01:137,15,0
chr10	94165325	.	GT	G	6408.67	PASS	AB=0.717;AC=38;AF=0.679;AN=56;BaseQRankSum=4.558;DP=538;FS=4.630;HRun=11;HaplotypeScore=59.1755;InbreedingCoeff=0.8376;MQ=73.87;MQ0=1;MQRankSum=-0.337;QD=17.95;ReadPosRankSum=4.600;VQSLOD=5.8622;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:92.89:763,93,0	1/1:2,9:11:23.96:197,24,0	0/0:23,0:15:25.36:0,25,189	0/0:12,0:12:4.81:0,5,110	1/1:3,28:31:83.85:683,84,0	1/1:1,22:24:67.96:548,68,0	1/1:3,7:10:11.98:99,12,0	0/0:11,0:19:29.69:0,30,174	1/1:0,14:14:38.96:320,39,0	1/1:4,16:21:47.92:393,48,0	1/1:6,20:27:36.21:404,36,0	1/1:4,11:16:28.87:227,29,0	1/1:4,14:18:41.94:345,42,0	1/1:2,12:14:32.96:271,33,0	1/1:5,18:23:26.77:370,27,0	1/1:2,16:18:18.96:362,19,0	0/1:2,10:12:2.02:192,0,2	1/1:1,3:5:11.01:80,11,0	0/0:24,0:25:31.71:0,32,479	0/0:25,0:25:66.12:0,66,680	0/1:13,2:16:10.35:10,0,295	1/1:0,14:14:38.95:320,39,0	1/1:5,11:17:31.98:252,32,0	1/1:2,9:11:26.97:222,27,0	1/1:3,16:20:43.97:351,44,0	0/0:29,1:30:50.54:0,51,737	0/0:32,2:35:34.75:0,35,757	0/0:3,0:9:17.11:0,17,86
chr10	94166430	.	C	CAT	606.62	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.597;DP=671;FS=0.000;HRun=0;HaplotypeScore=118.8819;InbreedingCoeff=0.9591;MQ=66.50;MQ0=0;MQRankSum=-0.265;QD=28.89;ReadPosRankSum=1.402;VQSLOD=5.2751;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:63.21:0,63,855	0/0:15,0:15:39.13:0,39,545	0/0:12,0:12:20.43:0,20,242	0/0:8,0:7:11.32:0,11,115	0/0:30,0:30:84.24:0,84,1153	0/0:21,0:21:57.19:0,57,797	0/0:23,0:23:50.65:0,51,655	0/0:27,0:27:72.23:0,72,984	0/0:27,0:27:75.22:0,75,1015	0/0:35,0:35:93.31:0,93,1288	0/0:25,0:25:68:0,68,891	0/0:23,0:23:66.19:0,66,896	0/0:22,0:22:63.21:0,63,874	0/0:26,0:26:72.24:0,72,1008	0/0:25,0:25:66.22:0,66,924	0/0:23,0:23:66.22:0,66,917	1/1:1,20:21:39.05:701,39,0	0/0:9,0:9:24.08:0,24,333	0/0:29,0:29:81.26:0,81,1119	0/0:39,0:39:99:0,117,1620	0/0:33,0:33:96.30:0,96,1324	0/0:23,0:23:60.19:0,60,817	0/0:26,0:26:72.22:0,72,989	0/0:17,0:17:49.41:0,49,671	0/0:22,0:22:60.18:0,60,820	0/0:28,0:28:84.27:0,84,1160	0/0:34,0:34:96.32:0,96,1344	0/0:19,0:19:48.16:0,48,672
chr10	94166681	.	GA	G	6871.31	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=7.629;DP=503;FS=3.231;HRun=10;HaplotypeScore=56.2690;InbreedingCoeff=0.9583;MQ=73.47;MQ0=0;MQRankSum=0.850;QD=21.88;ReadPosRankSum=4.172;VQSLOD=5.7335;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:54.06:0,54,570	1/1:1,12:13:32.99:286,33,0	0/0:18,0:18:28.10:0,28,312	0/0:9,0:10:3.78:0,4,91	1/1:1,15:16:44.94:384,45,0	1/1:2,14:16:35.99:313,36,0	1/1:0,12:12:29.99:260,30,0	0/0:21,0:21:24.22:0,24,468	1/1:2,28:31:71.01:605,71,0	1/1:3,19:22:56.74:475,57,0	1/1:0,25:25:71.98:624,72,0	1/1:0,14:14:38.99:339,39,0	1/1:0,18:18:50.99:443,51,0	1/1:1,12:13:32.99:286,33,0	1/1:0,22:22:62.99:547,63,0	1/1:2,16:18:38.97:339,39,0	1/1:0,18:18:44.99:391,45,0	1/1:0,10:10:26.95:227,27,0	0/0:15,0:15:36.10:0,36,398	0/0:24,0:25:72:0,72,760	0/0:12,0:12:30.06:0,30,317	1/1:3,16:19:50.98:442,51,0	1/1:2,19:21:56.98:495,57,0	1/1:3,4:8:14.02:110,14,0	1/1:4,14:17:8.80:305,9,0	0/0:22,3:25:11.04:0,11,563	0/0:23,0:23:57.15:0,57,630	0/0:17,0:18:47.96:0,48,512
chr10	94167661	.	C	CTT	5138.45	PASS	AB=0.686;AC=36;AF=0.643;AN=56;BaseQRankSum=11.900;DP=581;FS=13.252;HRun=10;HaplotypeScore=88.4314;InbreedingCoeff=0.6371;MQ=78.81;MQ0=0;MQRankSum=-0.511;QD=13.24;ReadPosRankSum=2.246;VQSLOD=1.8593;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:12:14.97:53,15,0	0/1:5,0:19:52.58:66,0,53	0/1:14,0:15:35.31:35,0,146	0/0:14,0:13:9.35:0,9,140	0/1:7,0:29:29.13:157,0,29	1/1:7,13:22:35.09:465,35,0	1/1:0,5:7:12.04:179,12,0	0/0:26,0:26:69.14:0,69,702	1/1:2,0:18:27.64:106,28,0	1/1:4,0:20:40.91:169,41,0	1/1:6,1:31:0.81:169,1,0	1/1:4,12:17:33.11:478,33,0	1/1:4,17:24:44.63:613,45,0	1/1:5,17:24:38.62:540,39,0	1/1:4,0:14:19.96:70,20,0	1/1:3,0:21:43.51:156,44,0	1/1:3,0:19:34.81:123,35,0	1/1:2,0:10:12.48:44,12,0	0/0:24,0:24:50.53:0,51,497	0/0:34,0:34:84.08:0,84,840	0/0:19,0:19:48.08:0,48,488	1/1:2,15:20:53.06:662,53,0	1/1:5,19:26:47.05:587,47,0	1/1:1,8:9:24.08:358,24,0	0/1:10,0:30:42.10:109,0,42	0/0:23,0:27:59.06:0,59,601	0/0:26,0:27:71.86:0,72,706	0/0:21,0:21:57.11:0,57,580
chr10	94168546	.	GA	G	2675.32	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.239;DP=438;FS=0.000;HRun=9;HaplotypeScore=49.0843;InbreedingCoeff=0.9623;MQ=81.88;MQ0=0;MQRankSum=-1.099;QD=20.58;ReadPosRankSum=3.166;VQSLOD=3.9345;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:69.02:0,69,766	1/1:2,6:9:20.04:171,20,0	0/0:19,0:16:30.36:0,30,341	0/0:18,0:17:11.09:0,11,231	1/1:3,20:23:57.02:521,57,0	0/0:22,0:22:60.13:0,60,661	0/0:16,1:17:20.66:0,21,477	0/0:34,1:35:68.81:0,69,1037	1/1:3,19:22:51.02:467,51,0	1/1:2,14:16:42.02:384,42,0	1/1:1,16:17:45.02:412,45,0	0/0:8,0:8:15.04:0,15,173	0/0:17,0:17:45.13:0,45,519	0/0:12,0:12:33.08:0,33,371	1/1:0,6:6:15:137,15,0	1/1:1,7:8:21.01:192,21,0	0/0:12,0:12:29.59:0,30,195	1/1:0,8:8:21.01:192,21,0	0/0:22,0:22:59.72:0,60,680	0/0:25,0:25:66.20:0,66,762	0/0:6,0:6:15.03:0,15,164	0/0:4,0:4:9.03:0,9,104	0/0:15,0:15:36.11:0,36,414	0/0:7,0:7:15.04:0,15,173	1/1:3,18:21:45.02:412,45,0	0/0:16,1:17:11.65:0,12,388	0/0:21,0:21:54.14:0,54,613	0/0:4,0:4:12.03:0,12,134
chr10	94168807	.	AT	A	4902.23	PASS	AB=0.789;AC=36;AF=0.643;AN=56;BaseQRankSum=10.758;DP=411;FS=8.763;HRun=9;HaplotypeScore=41.6420;InbreedingCoeff=0.8684;MQ=72.98;MQ0=3;MQRankSum=1.476;QD=19.61;ReadPosRankSum=2.790;VQSLOD=4.6854;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:3,8:11:1.71:144,0,2	1/1:0,7:7:18.01:165,18,0	0/0:22,0:10:16.54:0,17,131	0/1:16,0:9:0.86:1,0,50	1/1:2,21:23:59.89:528,60,0	1/1:2,19:21:48.02:438,48,0	1/1:1,6:7:15.01:137,15,0	0/0:30,0:30:72.16:0,72,783	1/1:2,11:13:27.01:247,27,0	1/1:1,13:14:38.97:345,39,0	1/1:0,22:22:65.96:592,66,0	1/1:0,8:8:18.01:165,18,0	1/1:2,11:13:24.01:220,24,0	1/1:0,15:15:39.02:357,39,0	1/1:1,10:11:21.01:192,21,0	1/1:1,9:10:21.01:192,21,0	0/0:15,0:15:40.35:0,40,444	1/1:2,10:12:18.01:165,18,0	0/0:14,0:14:33.10:0,33,381	0/0:22,0:22:63.13:0,63,694	0/0:1,0:1:3.01:0,3,35	1/1:0,7:7:18.01:165,18,0	1/1:2,10:12:30.02:274,30,0	1/1:0,4:4:12.01:110,12,0	1/1:2,22:24:51.03:467,51,0	0/0:18,0:18:20.73:0,21,483	0/0:25,0:26:66.03:0,66,741	0/0:13,0:13:33.10:0,33,376
chr10	94169285	.	T	TA	408.09	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.564;DP=533;FS=7.459;HRun=0;HaplotypeScore=84.7371;InbreedingCoeff=0.9684;MQ=74.70;MQ0=0;MQRankSum=0.984;QD=18.55;ReadPosRankSum=-1.890;VQSLOD=5.2339;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:98.16:0,98,554	0/0:6,0:6:17.47:0,17,100	0/0:12,0:11:30.10:0,30,403	0/0:10,0:9:15.36:0,15,165	0/0:21,0:21:49.96:0,50,265	0/0:22,0:22:53.36:0,53,297	0/0:21,0:21:50.64:0,51,280	0/0:36,0:36:99:0,102,1373	0/0:26,0:26:67.51:0,68,374	0/0:17,0:17:37.40:0,37,187	0/0:13,0:13:31.57:0,32,169	0/0:21,0:21:56.51:0,57,293	0/0:16,0:16:46.29:0,46,250	0/0:20,0:20:48.37:0,48,253	0/0:23,0:23:61.86:0,62,327	0/0:15,0:15:41.67:0,42,219	1/1:2,19:22:47.52:503,48,0	0/0:11,0:11:28.38:0,28,176	0/0:13,0:13:39.13:0,39,541	0/0:21,0:21:63.20:0,63,857	0/0:18,0:18:48.14:0,48,653	0/0:16,0:16:25.66:0,26,222	0/0:20,0:20:22.17:0,22,205	0/0:13,0:13:33.20:0,33,181	0/0:24,0:24:37.50:0,38,287	0/0:30,0:30:86.99:0,87,1153	0/0:22,0:22:66.22:0,66,919	0/0:8,0:8:24.08:0,24,336
chr10	94170210	.	G	GA	7528.51	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-9.657;DP=661;FS=11.933;HRun=6;HaplotypeScore=68.4905;InbreedingCoeff=0.9992;MQ=88.45;MQ0=0;MQRankSum=-1.029;QD=30.85;ReadPosRankSum=4.875;VQSLOD=4.5426;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,44:46:99:1510,120,0	0/0:8,0:8:21:0,21,203	0/0:25,0:24:57.04:0,57,543	0/0:28,0:29:56.79:0,57,515	0/0:31,0:31:90.18:0,90,909	1/1:0,17:17:45.14:566,45,0	1/1:4,12:16:33.11:415,33,0	0/0:32,0:32:82.93:0,83,803	0/0:22,0:22:63.12:0,63,631	0/0:34,0:34:96.20:0,96,973	0/0:25,0:25:66.15:0,66,672	1/1:0,20:20:54.17:679,54,0	1/1:3,19:22:45.14:566,45,0	1/1:5,22:27:53.72:679,54,0	0/0:20,0:20:57.12:0,57,576	0/0:17,0:16:48.08:0,48,476	1/1:3,17:20:48.15:604,48,0	0/0:22,0:22:54.09:0,54,542	0/0:19,0:19:47.14:0,47,513	0/0:24,0:24:63.12:0,63,632	0/0:25,0:25:72.13:0,72,721	1/1:2,20:22:59.97:745,60,0	1/1:3,31:34:87.28:1085,87,0	1/1:1,19:20:54.17:679,54,0	0/0:19,0:19:51.11:0,51,520	0/0:27,0:27:72.15:0,72,728	0/0:29,0:29:78.17:0,78,795	0/0:9,0:9:27.06:0,27,275
chr10	94170557	.	TACACACACACACAC	T	3761.37	PASS	AB=0.810;AC=30;AF=0.600;AN=50;BaseQRankSum=4.920;DP=458;FS=22.155;HRun=0;HaplotypeScore=184.7974;InbreedingCoeff=0.5706;MQ=50.05;MQ0=21;MQRankSum=-1.410;QD=13.43;ReadPosRankSum=3.964;VQSLOD=0.9757;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:21:3.01:72,3,0	./.	./.	0/0:25,0:9:3.90:0,4,52	1/1:16,4:23:2.82:24,3,0	1/1:13,0:15:13.29:378,13,0	1/1:14,0:13:0.89:3,1,0	0/0:18,0:17:21.06:0,21,801	1/1:12,5:17:14.97:351,15,0	1/1:17,4:21:12.04:436,12,0	./.	1/1:15,0:15:11.96:303,12,0	1/1:5,0:11:6.02:173,6,0	1/1:17,1:19:12.04:361,12,0	0/1:11,4:17:0:0,0,0	1/1:14,4:19:15.05:466,15,0	0/1:12,0:15:6.55:217,0,7	1/1:7,0:7:6.02:177,6,0	0/0:14,0:14:26.58:0,27,1051	0/0:17,0:17:12.04:0,12,631	0/0:12,0:11:6.88:0,7,210	1/1:8,0:11:15.05:469,15,0	1/1:7,0:10:8.68:211,9,0	0/0:12,0:13:0.77:0,1,2	0/1:7,5:13:0:0,0,0	0/1:25,0:24:99:121,0,2343	0/0:24,0:22:39.52:0,40,1622	0/0:10,0:8:21.07:0,21,1015
chr10	94170629	.	GAGAGAT	G	2051.98	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=1.317;DP=524;FS=2.975;HRun=0;HaplotypeScore=168.3418;InbreedingCoeff=0.0492;MQ=48.56;MQ0=17;MQRankSum=2.862;QD=6.14;ReadPosRankSum=-6.735;VQSLOD=0.4303;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:21:7.34:50,0,7	1/1:6,0:5:11.92:88,12,0	0/0:23,0:12:29.19:0,29,301	0/0:24,0:17:50.91:0,51,699	1/1:24,0:22:1.82:168,2,0	0/1:19,0:19:0.08:0,0,167	0/1:18,0:17:10.57:220,0,11	0/0:27,0:27:71.11:0,71,692	0/1:25,0:20:45.45:200,0,45	0/1:20,0:20:99:152,0,282	1/1:19,0:19:17.35:133,17,0	0/1:21,0:21:49.45:49,0,232	0/1:13,0:12:43.92:82,0,44	0/1:20,0:20:88.09:88,0,149	0/1:24,0:24:65.47:120,0,65	0/1:22,0:22:99:154,0,143	1/1:6,11:16:11.96:212,12,0	0/0:8,0:5:7.27:0,7,88	0/0:19,0:19:39:0,39,578	0/0:17,0:17:30:0,30,729	0/0:17,0:16:32.99:0,33,561	0/1:21,0:21:17.50:89,0,17	0/1:9,0:9:26.95:27,0,77	1/1:11,0:11:11.31:93,11,0	0/1:23,0:21:4.97:302,0,5	0/0:20,0:18:31.08:0,31,961	0/0:25,0:23:33.50:0,33,667	0/0:10,0:6:13.53:0,14,130
chr10	94170633	.	GAT	G	3139.64	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=7.165;DP=515;FS=5.185;HRun=0;HaplotypeScore=128.1908;InbreedingCoeff=0.7930;MQ=56.93;MQ0=13;MQRankSum=-0.892;QD=8.82;ReadPosRankSum=-1.952;VQSLOD=2.6565;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:11.05:79,11,0	1/1:7,0:6:14.91:113,15,0	0/0:27,0:16:31.76:0,32,347	0/0:26,0:19:50.91:0,51,496	1/1:25,0:23:32.93:266,33,0	1/1:17,0:17:19.64:138,20,0	1/1:18,0:17:41.45:334,41,0	0/0:27,0:27:53.07:0,53,612	1/1:26,0:21:39.66:305,40,0	1/1:18,0:18:31.05:262,31,0	1/1:17,0:17:20.34:156,20,0	1/1:18,0:18:25.57:166,26,0	1/1:12,0:12:15.87:127,16,0	1/1:18,0:18:16.72:141,17,0	1/1:24,0:24:26.71:209,27,0	1/1:20,0:20:26.76:218,27,0	1/1:16,0:16:11.94:107,12,0	1/1:8,0:5:5.51:35,6,0	0/0:19,0:19:24.65:0,25,350	0/0:13,4:17:32.92:0,33,419	0/0:18,0:17:35.97:0,36,370	1/1:21,0:21:22.97:163,23,0	1/1:7,0:7:8.93:67,9,0	1/1:10,0:10:11.57:93,12,0	1/1:22,0:21:41.94:347,42,0	0/1:21,0:19:7.41:7,0,391	0/0:25,0:23:6.33:0,6,315	0/1:10,0:7:4.93:5,0,63
chr10	94171095	.	CT	C	6975.74	PASS	AB=0.958;AC=39;AF=0.696;AN=56;BaseQRankSum=9.623;DP=463;FS=14.511;HRun=8;HaplotypeScore=50.9380;InbreedingCoeff=0.9061;MQ=76.76;MQ0=1;MQRankSum=0.347;QD=22.43;ReadPosRankSum=3.333;VQSLOD=4.0817;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,29:32:78.12:753,78,0	1/1:0,7:7:18.01:174,18,0	0/0:22,0:17:30.11:0,30,278	0/1:22,0:15:10.59:11,0,72	1/1:2,28:30:78.02:733,78,0	1/1:0,14:14:33.05:319,33,0	1/1:3,6:9:15.02:145,15,0	0/0:26,0:26:63.14:0,63,724	1/1:3,16:19:39.06:377,39,0	1/1:2,14:16:42.05:400,42,0	1/1:2,14:16:42.02:396,42,0	1/1:0,9:9:27.04:261,27,0	1/1:0,17:17:45.07:434,45,0	1/1:0,12:12:33.05:319,33,0	1/1:2,7:9:21.03:203,21,0	1/1:0,12:12:36.06:348,36,0	1/1:1,24:25:63.10:608,63,0	1/1:1,16:17:42.07:405,42,0	0/0:23,0:23:54.12:0,54,617	0/0:24,0:24:69.20:0,69,822	0/0:5,0:5:9.02:0,9,97	1/1:0,7:7:20.98:193,21,0	1/1:0,14:14:39.06:376,39,0	1/1:0,8:8:18.03:174,18,0	1/1:1,14:15:36.06:348,36,0	0/0:21,1:22:34.19:0,34,675	0/0:14,0:14:39.12:0,39,471	0/0:15,0:15:42.06:0,42,457
chr10	94171219	.	GT	G	2364.23	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=9.467;DP=449;FS=4.715;HRun=9;HaplotypeScore=72.6665;InbreedingCoeff=0.9866;MQ=70.33;MQ0=0;MQRankSum=-0.314;QD=19.38;ReadPosRankSum=2.784;VQSLOD=4.2250;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:20:42.02:384,42,0	0/0:5,0:5:12.02:0,12,127	0/0:11,0:11:30.04:0,30,325	0/0:5,0:4:12.04:0,12,139	0/0:22,0:22:57.17:0,57,658	1/1:1,13:14:36.02:330,36,0	1/1:2,10:12:27.01:246,27,0	0/0:23,0:23:50.96:0,51,559	0/0:9,0:9:24.07:0,24,277	0/0:29,0:29:72.18:0,72,815	0/0:21,0:21:60.18:0,60,692	1/1:3,15:18:38.60:356,39,0	1/1:2,11:13:30.02:274,30,0	1/1:1,6:7:18.01:165,18,0	0/0:8,0:8:21.06:0,21,241	0/0:11,0:11:27.08:0,27,311	0/0:32,0:32:87.21:0,87,979	0/0:21,0:21:60.16:0,60,680	0/0:17,0:17:33.08:0,33,381	0/0:29,0:29:72.20:0,72,816	0/0:10,0:10:30.09:0,30,346	1/1:0,10:10:27.01:247,27,0	1/1:2,17:19:42.02:384,42,0	1/1:2,7:9:21.01:192,21,0	0/0:16,0:16:45.13:0,45,519	0/0:21,0:21:54.16:0,54,623	0/0:27,0:27:66.17:0,66,741	0/0:10,0:10:30.09:0,30,346
chr10	94171761	.	T	TTCTC	2342.08	PASS	AB=0.750;AC=12;AF=0.214;AN=56;BaseQRankSum=-7.898;DP=622;FS=0.000;HRun=0;HaplotypeScore=182.3156;InbreedingCoeff=0.4971;MQ=56.97;MQ0=10;MQRankSum=-2.701;QD=12.39;ReadPosRankSum=-4.134;VQSLOD=2.5940;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:81.25:0,81,1247	0/0:13,0:13:33.10:0,33,508	0/0:33,0:11:5.79:0,6,70	0/1:39,0:18:18.84:21,0,19	0/0:22,0:22:48.10:0,48,671	0/0:18,0:18:39.46:0,39,362	0/0:10,0:10:6.01:0,6,56	1/1:20,4:24:16.87:331,17,0	0/0:17,0:17:39.96:0,40,557	0/0:17,0:16:17.81:0,18,234	0/0:20,0:20:27.09:0,27,427	0/0:24,0:24:35.53:0,36,315	0/0:25,0:25:32.84:0,33,299	0/0:20,0:19:38.98:0,39,351	0/0:24,0:24:36.10:0,36,529	0/0:22,0:22:54.14:0,54,741	0/0:25,0:25:5.09:0,5,148	0/0:20,0:19:24.03:0,24,355	1/1:6,6:12:24.05:377,24,0	1/1:16,7:28:20.27:319,20,0	0/1:18,13:33:99:403,0,115	0/0:23,0:23:46.87:0,47,397	0/0:26,0:26:39.85:0,40,354	0/0:24,0:24:45.04:0,45,415	0/0:12,0:12:27.06:0,27,404	0/1:10,8:21:46.11:394,0,46	0/1:11,12:25:18.46:521,0,18	1/1:2,2:5:6.02:144,6,0
chr10	94171766	.	T	TA	2756.88	PASS	AB=0.891;AC=25;AF=0.446;AN=56;BaseQRankSum=9.825;DP=622;FS=64.478;HRun=0;HaplotypeScore=143.4073;InbreedingCoeff=0.0975;MQ=57.78;MQ0=10;MQRankSum=6.204;QD=6.86;ReadPosRankSum=3.767;VQSLOD=0.7782;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:35,1:36:99:120,0,118	0/1:11,1:12:29.23:29,0,62	0/0:31,0:9:23.28:0,23,271	0/0:40,0:19:38.80:0,39,486	0/1:23,2:25:53.23:53,0,90	0/1:9,11:20:4.56:252,0,5	1/1:4,2:6:14.11:96,14,0	0/0:25,0:24:60.04:0,60,754	0/1:16,2:18:43.77:44,0,208	0/1:16,1:16:50.16:93,0,50	0/1:20,0:20:43.35:122,0,43	0/1:17,5:23:26.67:208,0,27	0/1:16,6:22:3.29:185,0,3	1/1:9,10:18:12:273,12,0	0/1:22,1:23:42.18:112,0,42	0/1:17,5:22:99:165,0,99	1/1:0,0:28:39.57:197,40,0	0/1:20,0:20:33.07:77,0,33	0/0:13,0:13:36.08:0,36,444	0/0:26,0:26:57.09:0,57,682	0/0:33,0:32:54.06:0,54,628	1/1:11,14:25:19.71:315,20,0	1/1:14,11:25:31.42:248,31,0	1/1:14,11:25:30.83:295,31,0	0/1:14,1:15:18.67:63,0,19	0/0:22,0:22:59.97:0,60,720	0/0:22,0:23:47.74:0,48,501	0/0:7,0:7:17.98:0,18,202
chr10	94171767	.	CTCT	C	2539.70	PASS	AB=0.887;AC=19;AF=0.339;AN=56;BaseQRankSum=8.903;DP=630;FS=2.693;HRun=0;HaplotypeScore=163.8358;InbreedingCoeff=0.6485;MQ=57.69;MQ0=12;MQRankSum=3.000;QD=11.39;ReadPosRankSum=3.324;VQSLOD=3.4479;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,1:38:39.37:0,39,1199	0/0:12,1:13:9.42:0,9,489	0/0:31,0:9:24.46:0,24,313	0/0:41,0:19:40.79:0,41,501	0/0:23,2:25:31.15:0,31,832	1/1:7,11:20:12.77:364,13,0	1/1:4,2:6:10.12:92,10,0	0/0:26,0:24:63.20:0,63,1136	0/1:15,2:17:8:8,0,665	0/1:18,1:17:17.23:17,0,353	0/0:20,0:20:2.14:0,2,451	1/1:12,4:23:1.86:306,2,0	1/1:11,6:22:19.22:261,19,0	1/1:7,8:18:23.39:360,23,0	0/0:22,1:23:0.95:0,1,559	0/1:17,5:22:99:137,0,532	0/0:28,0:28:50.80:0,51,820	0/0:21,0:20:39.19:0,39,512	0/0:13,0:13:36.11:0,36,612	0/0:26,0:26:57.19:0,57,1048	0/0:33,0:32:54.17:0,54,974	1/1:9,13:25:17.45:435,17,0	1/1:12,10:26:31.60:362,32,0	1/1:9,11:24:31.08:392,31,0	0/0:16,1:17:10.29:0,10,484	0/0:22,0:22:59.99:0,60,1037	0/0:23,0:23:48.16:0,48,828	0/0:7,0:7:18.06:0,18,287
chr10	94171769	.	CT	C	1330.97	PASS	AB=0.886;AC=11;AF=0.196;AN=56;BaseQRankSum=6.262;DP=628;FS=1.776;HRun=1;HaplotypeScore=146.5644;InbreedingCoeff=0.1017;MQ=57.64;MQ0=12;MQRankSum=2.721;QD=7.12;ReadPosRankSum=6.774;VQSLOD=0.8325;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:87.42:0,87,1378	0/0:14,0:14:17.59:0,18,515	0/0:30,0:8:20.43:0,20,243	0/0:41,0:18:37.84:0,38,464	0/0:25,0:25:54.54:0,55,894	0/1:19,2:21:6.41:216,0,6	1/1:5,0:5:0.44:41,0,0	0/0:23,0:21:54.16:0,54,748	0/0:18,0:18:18.93:0,19,696	0/0:20,0:18:28.68:0,29,494	0/0:19,0:19:50.38:0,50,574	0/1:17,6:23:56.81:170,0,57	0/1:17,5:22:61.38:160,0,61	1/1:16,3:18:1.75:205,2,0	0/0:23,0:23:47.54:0,48,718	0/1:22,0:22:47.20:47,0,579	0/0:26,0:26:50.96:0,51,714	0/0:21,0:20:59.42:0,59,663	0/0:13,0:12:33.10:0,33,447	0/0:28,0:28:54.14:0,54,688	0/0:32,0:31:51.11:0,51,622	0/1:24,2:26:17.29:232,0,17	0/1:22,3:25:10.52:176,0,11	0/1:20,4:24:35.35:227,0,35	0/0:17,0:17:30.71:0,31,537	0/0:22,0:22:58.71:0,59,746	0/0:24,0:24:51.09:0,51,575	0/0:7,0:7:18.04:0,18,207
chr10	94172019	.	CAAG	C	1668.99	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.912;DP=685;FS=3.070;HRun=0;HaplotypeScore=97.2553;InbreedingCoeff=0.9956;MQ=79.13;MQ0=0;MQRankSum=-4.528;QD=37.93;ReadPosRankSum=2.555;VQSLOD=4.4691;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:72.25:1228,72,0	0/0:15,0:15:45.15:0,45,1037	0/0:15,0:15:39:0,39,724	0/0:18,0:18:33.66:0,34,840	0/0:23,0:23:63.22:0,63,1448	0/0:25,0:25:72.25:0,72,1660	0/0:18,0:18:54.18:0,54,1209	0/0:37,0:37:99:0,105,2382	0/0:31,0:31:90.29:0,90,2026	0/0:22,0:22:66.19:0,66,1477	0/0:18,0:18:54.19:0,54,1245	0/0:16,0:16:48.16:0,48,1108	0/0:26,0:26:69.22:0,69,1547	0/0:24,0:24:72.25:0,72,1638	0/0:29,0:29:84.29:0,84,1917	0/0:34,0:34:99:0,99,2283	1/1:0,16:16:33.09:563,33,0	0/0:19,0:19:54.19:0,54,1245	0/0:20,0:20:57.20:0,57,1296	0/0:35,0:35:99:0,102,2349	0/0:47,0:47:99:0,132,3023	0/0:27,0:27:81.28:0,81,1864	0/0:27,0:27:81.28:0,81,1868	0/0:26,0:26:78.27:0,78,1799	0/0:24,0:24:72.21:0,72,1529	0/0:30,0:30:90.31:0,90,2077	0/0:29,0:28:87.30:0,87,2004	0/0:6,0:6:18.06:0,18,414
chr10	94174793	.	T	TTG	7332.98	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-12.719;DP=671;FS=2.488;HRun=0;HaplotypeScore=86.3841;InbreedingCoeff=0.9668;MQ=74.29;MQ0=0;MQRankSum=-1.163;QD=38.39;ReadPosRankSum=1.713;VQSLOD=6.9805;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.27:0,96,1193	1/1:2,4:6:12.04:185,12,0	0/0:33,0:27:59.90:0,60,734	0/0:42,0:41:43.23:0,43,994	1/1:4,19:23:19.32:859,19,0	0/0:21,0:21:51.16:0,51,643	0/0:20,0:20:42.13:0,42,530	0/0:32,0:32:66.20:0,66,822	1/1:5,16:21:42.14:698,42,0	1/1:4,19:23:25.76:866,26,0	1/1:2,23:26:63.22:1047,63,0	0/0:19,0:19:57.18:0,57,719	0/0:28,0:28:69.22:0,69,867	0/0:20,0:20:54.15:0,54,656	1/1:5,23:29:69.23:1117,69,0	1/1:1,25:26:66.23:1097,66,0	0/0:27,0:27:69.69:0,70,871	1/1:3,15:19:45.14:715,45,0	0/0:25,0:25:57.16:0,57,697	0/0:25,0:25:69.21:0,69,857	0/0:35,0:35:96.27:0,96,1184	0/0:12,0:12:33.11:0,33,416	0/0:13,0:13:30.09:0,30,373	0/0:35,0:35:87.28:0,87,1097	1/1:0,18:18:45.15:748,45,0	0/0:22,0:22:45.14:0,45,568	0/0:27,0:26:69.19:0,69,844	0/0:5,0:5:3.01:0,3,38
chr10	94175875	.	CT	C	2071.60	PASS	AB=0.742;AC=31;AF=0.554;AN=56;BaseQRankSum=7.269;DP=582;FS=9.949;HRun=13;HaplotypeScore=85.4023;InbreedingCoeff=0.2959;MQ=73.92;MQ0=1;MQRankSum=-0.005;QD=5.37;ReadPosRankSum=7.543;VQSLOD=1.0781;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:29:40.48:0,40,219	0/1:8,4:12:17.28:54,0,17	0/0:19,0:19:16.08:0,16,105	0/1:11,1:13:2.55:3,0,121	0/1:7,12:19:11.64:220,0,12	1/1:6,1:23:28.48:82,28,0	1/1:7,0:18:13.70:40,14,0	0/0:25,2:32:5.89:0,6,328	0/1:22,10:33:77.33:215,0,77	1/1:14,13:27:3.53:189,4,0	0/1:7,12:20:13.23:206,0,13	1/1:5,0:14:12.19:35,12,0	1/1:4,0:10:8.11:23,8,0	1/1:11,0:20:16.09:47,16,0	0/1:13,5:18:83.17:101,0,83	1/1:6,18:24:21.67:321,22,0	0/0:5,0:26:17.29:0,17,97	1/1:12,10:24:17.67:229,18,0	0/1:11,1:14:16.90:17,0,33	0/0:16,2:20:3.19:0,3,297	0/0:22,1:24:11.49:0,11,404	1/1:4,1:25:43.71:139,44,0	1/1:3,1:13:15.19:57,15,0	1/1:2,0:14:16.28:47,16,0	0/1:6,13:21:15.54:209,0,16	0/1:18,3:23:27.55:28,0,258	0/0:26,0:39:45.51:0,46,439	0/0:5,0:7:17.86:0,18,160
chr10	94176801	.	AACACAC	A	2125.37	PASS	AB=0.831;AC=18;AF=0.346;AN=52;BaseQRankSum=3.299;DP=476;FS=4.513;HRun=0;HaplotypeScore=120.2787;InbreedingCoeff=0.7163;MQ=63.68;MQ0=5;MQRankSum=-6.595;QD=12.29;ReadPosRankSum=0.915;VQSLOD=2.6719;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:27:5.05:0,5,35	0/0:9,0:9:9.03:0,9,291	./.	./.	0/1:14,0:16:14.81:15,0,501	1/1:19,5:24:18.02:324,18,0	1/1:14,8:22:9.03:182,9,0	0/0:28,0:28:15.02:0,15,168	0/0:18,0:18:21.07:0,21,630	0/0:19,0:19:36.12:0,36,1048	0/0:13,0:14:18.06:0,18,515	1/1:14,4:18:15.04:268,15,0	1/1:8,1:10:8.16:160,8,0	1/1:16,6:23:18.06:346,18,0	0/0:18,0:18:30.09:0,30,752	0/0:8,0:9:9.03:0,9,249	1/1:11,4:13:14.79:167,15,0	0/0:7,0:7:9.03:0,9,236	0/0:13,0:13:6.02:0,6,194	0/0:25,0:27:33.08:0,33,699	0/0:20,0:19:27.08:0,27,569	0/1:12,5:17:4.38:337,0,4	1/1:10,6:16:26.68:434,27,0	1/1:10,2:12:5.84:81,6,0	0/0:15,0:15:33:0,33,934	0/0:15,0:15:36.12:0,36,736	0/0:15,0:17:39.13:0,39,870	0/0:4,0:8:3.01:0,3,78
chr10	94176867	.	T	TTC	3151.72	PASS	AB=0.968;AC=21;AF=0.375;AN=56;BaseQRankSum=5.398;DP=605;FS=2.502;HRun=0;HaplotypeScore=191.0909;InbreedingCoeff=0.6934;MQ=57.28;MQ0=3;MQRankSum=-2.800;QD=14.07;ReadPosRankSum=0.840;VQSLOD=3.2249;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:3.67:0,4,103	1/1:5,2:8:15.51:171,16,0	0/0:25,0:18:31.07:0,31,378	0/0:12,0:10:20.84:0,21,173	1/1:10,5:15:18.01:220,18,0	0/0:21,0:21:5.32:0,5,88	0/0:36,0:36:14.03:0,14,143	0/0:17,0:17:47.94:0,48,419	1/1:17,8:25:59.85:648,60,0	1/1:23,7:30:73.14:824,73,0	1/1:8,6:16:17.88:198,18,0	0/0:24,0:24:7.37:0,7,106	0/1:17,0:17:9.64:23,0,10	0/0:25,0:25:11.98:0,12,73	1/1:8,10:18:35.94:378,36,0	1/1:12,5:17:18.04:222,18,0	0/1:32,0:32:57.37:168,0,57	1/1:6,4:10:23.88:252,24,0	0/0:22,0:21:56.95:0,57,493	0/0:23,0:23:44.93:0,45,431	0/0:36,0:36:71.72:0,72,596	0/0:25,0:25:9.05:0,9,75	0/0:26,0:26:17.92:0,18,107	0/0:24,0:24:5.56:0,6,30	1/1:8,8:17:25.10:237,25,0	0/1:17,2:18:17.57:18,0,325	0/0:19,0:19:56.82:0,57,456	0/0:11,0:11:21.05:0,21,288
chr10	94176871	.	CTG	C	1462.09	PASS	AB=0.815;AC=10;AF=0.179;AN=56;BaseQRankSum=-7.636;DP=688;FS=3.349;HRun=0;HaplotypeScore=218.8392;InbreedingCoeff=0.6423;MQ=54.85;MQ0=5;MQRankSum=2.760;QD=10.30;ReadPosRankSum=1.107;VQSLOD=3.5393;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:26.97:0,27,191	0/0:12,0:12:9.74:0,10,63	0/0:27,0:17:3.41:0,3,19	0/0:16,0:10:3.01:0,3,32	0/0:24,0:24:7.70:0,8,54	0/0:21,0:21:21.49:0,21,209	0/0:37,0:37:32.70:0,33,248	0/1:16,1:18:27.19:27,0,141	0/0:36,0:35:45.70:0,46,296	0/0:38,0:38:55.89:0,56,436	0/0:23,0:23:8.98:0,9,73	0/0:29,0:29:41.89:0,42,371	0/0:18,0:18:32.93:0,33,272	0/0:26,0:26:41.91:0,42,338	0/0:22,0:22:27.90:0,28,223	0/0:12,0:24:7.58:0,8,81	0/0:32,0:32:65.79:0,66,532	0/0:15,0:15:29.17:0,29,204	1/1:16,5:20:15.04:170,15,0	1/1:7,14:23:38.90:423,39,0	1/1:14,27:41:47.70:524,48,0	0/0:28,0:27:36.81:0,37,268	0/0:27,0:27:29.30:0,29,235	0/0:23,0:24:38.93:0,39,337	0/0:22,0:22:9.47:0,9,110	0/1:12,6:18:11.54:196,0,12	1/1:9,8:19:28.70:288,29,0	0/0:11,0:11:24.53:0,25,346
chr10	94176893	.	G	GTGTA	10318.77	PASS	AB=0.867;AC=35;AF=0.625;AN=56;BaseQRankSum=-4.071;DP=756;FS=5.861;HRun=0;HaplotypeScore=199.8121;InbreedingCoeff=0.5801;MQ=53.52;MQ0=14;MQRankSum=3.386;QD=19.32;ReadPosRankSum=6.444;VQSLOD=3.6693;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:34:19.34:208,19,0	0/1:9,0:11:7.99:169,0,8	0/0:35,0:11:14.65:0,15,175	0/0:31,0:13:13.40:0,13,190	1/1:25,0:26:1.20:129,1,0	1/1:1,21:23:33.11:883,33,0	1/1:2,32:36:36.12:957,36,0	0/0:22,0:22:53.94:0,54,536	1/1:31,0:36:9.62:464,10,0	0/1:32,0:33:99:406,0,126	1/1:24,0:29:15.05:266,15,0	1/1:7,18:28:6.69:870,7,0	1/1:2,22:29:33.06:734,33,0	1/1:3,17:25:37.11:1094,37,0	1/1:21,0:24:5.23:314,5,0	1/1:17,0:22:25.84:321,26,0	0/1:37,0:37:28.90:305,0,29	1/1:15,0:17:16.07:231,16,0	0/0:23,0:20:47.68:0,48,436	0/0:31,0:31:80.98:0,81,784	0/0:48,0:46:71.55:0,72,789	1/1:5,19:25:33.11:885,33,0	1/1:6,24:30:30.73:808,31,0	0/1:7,17:28:0.80:920,0,1	1/1:16,0:21:12.28:284,12,0	0/1:16,0:16:69.83:70,0,323	0/0:18,0:18:47.82:0,48,454	0/0:13,0:13:24.53:0,25,481
chr10	94176895	.	G	GTA	3864.42	PASS	AB=0.981;AC=24;AF=0.429;AN=56;BaseQRankSum=6.981;DP=749;FS=0.000;HRun=0;HaplotypeScore=202.5256;InbreedingCoeff=0.4085;MQ=52.90;MQ0=14;MQRankSum=2.216;QD=8.82;ReadPosRankSum=8.864;VQSLOD=2.5800;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,2:37:20.91:214,21,0	0/1:10,0:11:19.19:19,0,54	0/0:33,0:9:15.02:0,15,154	0/0:33,0:14:23.06:0,23,208	0/0:26,0:26:22.70:0,23,181	1/1:23,0:23:33.05:319,33,0	1/1:31,0:31:8.63:288,9,0	0/0:21,0:21:56.87:0,57,514	0/1:35,0:34:32.24:32,0,144	0/1:31,0:31:12:12,0,341	0/0:29,0:29:31.08:0,31,237	1/1:27,0:27:9.04:296,9,0	1/1:29,0:29:32.30:268,32,0	1/1:25,0:26:36.54:377,37,0	0/1:25,0:25:22.48:22,0,132	0/1:22,0:22:16.96:17,0,69	1/1:4,33:38:39.70:1115,40,0	0/0:17,0:17:10.18:0,10,144	0/0:24,0:21:50.57:0,51,401	0/0:32,0:32:83.73:0,84,652	0/0:47,0:46:70.74:0,71,596	1/1:26,0:25:33.05:320,33,0	0/1:28,0:28:14.42:257,0,14	0/1:25,2:27:23.11:300,0,23	0/1:21,0:21:7.41:7,0,103	0/0:18,0:17:29.09:0,29,292	0/0:19,0:19:47.65:0,48,358	0/0:11,0:11:27.13:0,27,400
chr10	94177235	.	G	GAA	4680.79	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=9.892;DP=474;FS=1.275;HRun=8;HaplotypeScore=66.5212;InbreedingCoeff=0.9968;MQ=81.12;MQ0=0;MQRankSum=-0.437;QD=29.81;ReadPosRankSum=2.377;VQSLOD=4.9091;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:12:24.95:86,25,0	0/0:7,0:7:18.05:0,18,201	0/0:20,0:20:29.51:0,30,310	0/0:10,0:10:20.99:0,21,218	0/0:26,0:26:75.19:0,75,836	1/1:2,19:21:48.16:762,48,0	1/1:0,11:11:30.10:476,30,0	0/0:30,0:30:81.20:0,81,895	0/0:17,0:17:39.09:0,39,435	0/0:23,0:23:60.15:0,60,669	0/0:16,0:16:42.07:0,42,454	1/1:0,17:17:39.13:619,39,0	1/1:1,8:10:24.08:381,24,0	1/1:0,13:13:36.12:572,36,0	0/0:11,0:11:30.08:0,30,334	0/0:13,0:13:36.10:0,36,401	1/1:3,0:31:64.88:223,65,0	0/0:16,0:16:36.08:0,36,401	0/0:21,0:21:60.12:0,60,649	0/0:29,0:29:75.18:0,75,827	0/0:10,0:10:27.06:0,27,291	1/1:4,15:19:42.10:629,42,0	1/1:1,12:14:36.12:552,36,0	1/1:1,8:9:24.08:381,24,0	0/0:21,0:21:48.12:0,48,535	0/0:11,0:12:32.81:0,33,337	0/0:24,0:24:51.11:0,51,568	0/0:11,0:11:33.09:0,33,368
chr10	94177672	.	G	GA	6044.68	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-14.564;DP=579;FS=0.000;HRun=8;HaplotypeScore=63.0057;InbreedingCoeff=0.9990;MQ=77.93;MQ0=0;MQRankSum=-1.399;QD=28.65;ReadPosRankSum=2.101;VQSLOD=5.1058;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:24:40.74:0,41,120	1/1:0,8:9:26.87:277,27,0	0/0:16,0:16:33:0,33,295	0/0:11,0:11:23.88:0,24,207	1/1:2,32:36:77.38:1065,77,0	0/0:32,0:32:81.01:0,81,736	0/0:15,0:15:39.02:0,39,357	0/0:30,0:30:71.97:0,72,642	1/1:5,13:18:42.12:476,42,0	1/1:2,25:27:75.21:856,75,0	1/1:2,22:24:60.18:693,60,0	0/0:16,0:16:48.01:0,48,435	0/0:22,0:22:63.02:0,63,571	0/0:12,0:12:33.02:0,33,302	1/1:3,17:19:42.12:485,42,0	1/1:3,19:22:48.14:554,48,0	1/1:1,15:16:45.09:504,45,0	1/1:2,12:15:33.10:381,33,0	0/0:28,0:28:78.03:0,78,709	0/0:33,0:33:93.03:0,93,846	0/0:22,0:22:57.01:0,57,516	0/0:19,0:19:51.01:0,51,462	0/0:16,0:16:39.02:0,39,357	0/0:11,0:11:29.97:0,30,266	1/1:3,21:24:66.19:754,66,0	0/0:21,1:22:25.41:0,25,487	0/0:29,0:29:81.02:0,81,735	0/0:10,0:10:30.02:0,30,275
chr10	94178135	.	T	TCTC	16150.45	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.584;DP=734;FS=3.753;HRun=0;HaplotypeScore=162.2222;InbreedingCoeff=0.9991;MQ=75.84;MQ0=0;MQRankSum=-14.004;QD=56.87;ReadPosRankSum=1.355;VQSLOD=5.9977;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:56.93:1239,57,0	1/1:1,14:15:42.13:951,42,0	0/0:26,0:26:72.22:0,72,1138	0/0:20,0:20:27.09:0,27,649	1/1:2,38:41:99:2411,105,0	0/0:25,0:25:75.26:0,75,1274	0/0:16,0:16:48.16:0,48,815	0/0:30,0:30:84.28:0,84,1389	1/1:3,13:16:36.08:777,36,0	1/1:9,33:43:99:2586,117,0	1/1:8,43:51:99:2792,123,0	0/0:22,0:22:66.21:0,66,1096	0/0:27,0:27:78.25:0,78,1297	0/0:20,0:20:54.12:0,54,862	1/1:5,19:24:69.19:1481,69,0	1/1:2,17:19:51.18:1173,51,0	0/0:18,0:18:54.17:0,54,893	1/1:4,12:17:36.12:827,36,0	0/0:12,0:12:33.11:0,33,534	0/0:39,0:39:99:0,114,1920	0/0:18,0:18:51.16:0,51,844	0/0:46,0:46:99:0,135,2276	0/0:37,0:37:99:0,102,1730	0/0:11,0:11:33.11:0,33,557	1/1:5,30:35:84.29:1914,84,0	0/0:32,1:33:30.24:0,30,1537	0/0:41,0:41:99:0,100,1767	0/0:9,0:9:21.07:0,21,357
chr10	94178232	.	A	AC	18250.28	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=19.525;DP=695;FS=0.000;HRun=1;HaplotypeScore=201.8267;InbreedingCoeff=0.9999;MQ=82.37;MQ0=0;MQRankSum=-2.200;QD=41.01;ReadPosRankSum=6.893;VQSLOD=3.6373;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.23:0,72,935	1/1:1,15:16:45.15:673,45,0	0/0:24,0:24:51.53:0,52,732	0/0:19,0:19:54.17:0,54,684	1/1:1,27:29:78.26:1167,78,0	1/1:2,36:38:99:1548,105,0	1/1:1,22:23:69.23:1034,69,0	0/0:33,0:33:84.27:0,84,1090	1/1:0,22:22:60.20:899,60,0	1/1:1,47:48:99:2131,144,0	1/1:0,25:25:72.24:1078,72,0	1/1:3,24:27:72.20:1053,72,0	1/1:3,20:23:60.17:868,60,0	1/1:2,22:24:66.18:964,66,0	1/1:1,29:30:87.29:1301,87,0	1/1:1,19:20:54.18:809,54,0	0/0:12,0:12:36.12:0,36,467	1/1:3,10:13:30.10:449,30,0	0/0:18,0:18:51.16:0,51,649	0/0:32,0:32:93.28:0,93,1190	0/0:19,0:19:54.15:0,54,685	1/1:0,32:33:90.30:1336,90,0	1/1:0,28:28:75.25:1123,75,0	1/1:3,16:19:48.16:719,48,0	1/1:2,25:27:75.21:1098,75,0	0/0:19,0:19:57.19:0,57,740	0/0:31,0:31:87.28:0,87,1127	0/0:15,0:15:42.14:0,42,545
chr10	94178727	.	GCA	G	3785.60	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=2.293;DP=624;FS=0.429;HRun=0;HaplotypeScore=148.2062;InbreedingCoeff=0.9308;MQ=59.13;MQ0=13;MQRankSum=-2.057;QD=21.03;ReadPosRankSum=3.589;VQSLOD=4.0141;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:36:68.60:0,69,964	1/1:0,9:9:6.02:82,6,0	0/0:41,0:22:43.75:0,44,763	0/0:40,0:22:34.82:0,35,765	1/1:0,26:26:3.01:47,3,0	0/0:16,0:16:36.09:0,36,504	0/0:27,0:26:41.86:0,42,589	0/0:21,0:20:59.68:0,60,939	1/1:13,9:22:44.96:546,45,0	1/1:19,9:24:71.21:868,71,0	1/1:0,13:13:6:77,6,0	0/0:19,0:19:21.07:0,21,307	0/0:14,0:14:30.10:0,30,450	0/0:17,0:16:18.02:0,18,237	1/1:0,15:15:12.02:153,12,0	1/1:4,5:8:17.31:246,17,0	1/1:16,9:25:42.13:558,42,0	1/1:7,8:15:45.15:618,45,0	0/0:19,0:19:53.71:0,54,729	0/0:26,0:25:35:0,35,515	0/0:61,0:59:98.92:0,99,1437	0/0:22,0:22:23.78:0,24,361	0/0:11,0:11:18.05:0,18,249	0/0:26,0:25:30.04:0,30,401	1/1:14,4:18:42.14:591,42,0	0/0:27,1:28:48.16:0,48,1061	0/0:9,0:9:26.94:0,27,327	0/0:6,0:6:18.06:0,18,331
chr10	94178731	.	GCA	G	896.93	PASS	AB=1.000;AC=19;AF=0.352;AN=54;BaseQRankSum=2.899;DP=666;FS=11.492;HRun=0;HaplotypeScore=171.1853;InbreedingCoeff=0.6364;MQ=56.37;MQ0=14;MQRankSum=-0.857;QD=4.72;ReadPosRankSum=3.109;VQSLOD=2.0763;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:17.44:0,17,120	1/1:7,2:9:6.01:57,6,0	0/0:41,0:20:3.01:0,3,38	0/0:45,0:20:0:0,0,0	0/0:22,4:26:0.22:0,0,2	0/0:17,0:17:8.77:0,9,51	0/0:25,0:24:11.75:0,12,107	0/1:23,0:22:38.99:39,0,136	1/1:15,5:21:26.98:244,27,0	1/1:24,4:27:11.44:108,11,0	1/1:11,4:15:1.37:45,1,0	0/0:21,0:21:9.77:0,10,41	0/0:12,0:17:7.76:0,8,49	0/0:20,0:19:3:0,3,25	1/1:14,4:18:8.80:101,9,0	1/1:4,2:8:8.23:73,8,0	1/1:18,0:21:8.52:42,9,0	1/1:12,7:20:25.13:230,25,0	0/0:18,0:18:9:0,9,88	0/0:14,0:25:13.89:0,14,106	0/0:60,1:65:38.91:0,39,538	0/0:27,0:27:1.25:0,1,4	./.	0/0:25,0:24:0:0,0,0	1/1:18,3:22:14.97:132,15,0	0/0:30,1:31:30.49:0,30,349	0/0:9,0:10:14.86:0,15,111	0/0:9,0:9:18.50:0,18,235
chr10	94178767	.	ACCAGAG	A	1021.76	PASS	AB=0.931;AC=16;AF=0.296;AN=54;BaseQRankSum=2.417;DP=677;FS=22.342;HRun=0;HaplotypeScore=199.6941;InbreedingCoeff=0.2258;MQ=56.29;MQ0=24;MQRankSum=-3.700;QD=3.12;ReadPosRankSum=-3.307;VQSLOD=0.8565;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:49,0:37:2.68:3,0,1746	0/0:3,0:3:9.03:0,9,229	0/0:48,0:20:55.99:0,56,1335	0/0:65,0:24:37.90:0,38,1107	0/0:16,0:16:26.82:0,27,862	1/1:9,2:11:9.03:133,9,0	0/1:12,4:15:10.91:11,0,40	0/0:24,0:22:62.36:0,62,1891	0/0:22,0:22:54.19:0,54,1550	0/0:28,0:24:45.68:0,46,2005	0/0:13,0:13:24:0,24,641	1/1:16,3:20:24.08:439,24,0	0/1:5,4:9:18.92:109,0,19	1/1:10,5:16:6.86:81,7,0	0/0:23,0:22:45.07:0,45,1302	0/0:13,0:12:29.30:0,29,752	0/0:20,0:18:54.18:0,54,1510	0/0:22,0:22:4.20:0,4,1698	0/1:16,0:14:14.07:14,0,884	0/1:23,0:23:6.60:7,0,932	0/1:99,0:94:53.17:53,0,6669	1/1:9,8:18:2.21:69,2,0	./.	0/0:14,2:15:0:0,0,0	0/0:16,0:16:48.16:0,48,1463	0/1:29,0:28:99:237,0,1434	0/1:20,0:20:26.18:26,0,1726	0/0:12,0:12:23.40:0,23,857
chr10	94178768	.	CCAGAGCACA	C	1900.27	PASS	AB=0.983;AC=19;AF=0.352;AN=54;BaseQRankSum=-1.006;DP=653;FS=14.550;HRun=0;HaplotypeScore=215.8928;InbreedingCoeff=0.2979;MQ=57.39;MQ0=24;MQRankSum=-4.767;QD=5.79;ReadPosRankSum=-2.316;VQSLOD=1.1404;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:48,0:36:35.64:36,0,2484	0/0:3,0:3:9.03:0,9,254	0/0:48,0:21:57.19:0,57,1647	0/0:64,0:25:45.24:0,45,1473	0/0:17,0:17:36.04:0,36,1347	1/1:3,7:10:9.03:282,9,0	1/1:4,6:11:4.19:52,4,0	0/0:24,0:22:57.07:0,57,2339	0/0:23,0:23:57.20:0,57,2251	0/0:29,0:25:25.08:0,25,2760	0/0:13,0:13:27.04:0,27,969	1/1:4,12:17:24.08:724,24,0	1/1:8,0:8:5.03:111,5,0	1/1:7,7:14:6.91:138,7,0	0/0:23,0:22:45.13:0,45,1859	0/0:12,0:11:27.09:0,27,1096	0/0:21,0:19:57.20:0,57,2180	0/1:21,1:22:33.85:34,0,2265	0/1:15,0:14:57.30:57,0,1059	0/1:18,0:20:55.90:56,0,1275	0/1:93,3:95:99:156,0,9517	1/1:9,5:14:2.26:90,2,0	./.	0/0:2,10:11:0:0,0,0	0/0:17,0:17:51.18:0,51,2112	0/1:27,0:25:99:248,0,2055	0/1:20,1:21:88.23:88,0,2488	0/0:11,0:11:23.39:0,23,1189
chr10	94178770	.	AGAG	A	189.81	PASS	AB=0.976;AC=9;AF=0.167;AN=54;BaseQRankSum=6.615;DP=651;FS=9.740;HRun=0;HaplotypeScore=173.9439;InbreedingCoeff=0.4695;MQ=58.34;MQ0=23;MQRankSum=-2.337;QD=2.26;ReadPosRankSum=-2.563;VQSLOD=1.6032;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:36:33.07:0,33,1341	0/0:3,0:3:9.03:0,9,193	0/0:50,0:22:63.10:0,63,1329	0/0:68,0:29:31.39:0,31,1280	0/0:18,0:18:32.88:0,33,800	1/1:10,0:10:8.75:51,9,0	0/0:10,1:11:9.02:0,9,111	0/0:24,0:22:63.14:0,63,1507	0/0:23,0:23:56.22:0,56,1277	0/0:29,0:25:42.35:0,42,1675	0/0:14,0:14:30.01:0,30,683	1/1:16,1:17:23.83:190,24,0	0/1:7,0:7:25.42:25,0,38	0/1:12,1:13:7.04:18,0,7	0/0:23,0:22:45.06:0,45,1054	0/0:14,0:13:30.10:0,30,648	0/0:22,0:20:60.20:0,60,1343	0/0:22,0:22:39.24:0,39,1401	0/0:16,0:15:1.61:0,2,930	0/0:16,0:17:4.85:0,5,703	0/0:101,0:97:99:0,120,5299	1/1:13,1:14:2.59:31,3,0	./.	0/0:12,0:11:0:0,0,0	0/0:17,0:17:51.18:0,51,1230	0/1:23,0:21:14.99:15,0,1113	0/0:21,0:21:39.44:0,39,1331	0/0:8,0:8:24.08:0,24,591
chr10	94178776	.	CA	C	147.82	PASS	AB=0.867;AC=11;AF=0.204;AN=54;BaseQRankSum=6.258;DP=675;FS=3.265;HRun=2;HaplotypeScore=161.5856;InbreedingCoeff=0.7332;MQ=58.09;MQ0=21;MQRankSum=-4.825;QD=2.05;ReadPosRankSum=1.026;VQSLOD=-0.4037;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:36:66.75:0,67,964	0/0:4,0:4:9.03:0,9,135	0/0:53,1:27:78.10:0,78,1063	0/0:74,0:33:81.96:0,82,1077	0/0:17,0:17:39.03:0,39,535	1/1:7,2:9:7.36:27,7,0	0/0:7,4:11:2.79:0,3,19	0/0:29,0:28:81.22:0,81,1190	0/0:24,0:24:57.19:0,57,848	0/0:30,1:28:59.01:0,59,1142	0/0:13,0:13:30.01:0,30,399	1/1:13,4:17:22.68:165,23,0	1/1:2,4:6:3.01:37,3,0	1/1:8,5:13:2.55:24,3,0	0/0:25,0:24:45.14:0,45,674	0/0:15,0:14:33.11:0,33,489	0/0:24,0:22:66.22:0,66,981	0/0:22,0:22:41.42:0,41,911	0/0:15,0:14:42.14:0,42,630	0/0:16,0:16:39.12:0,39,564	0/0:104,0:101:99:0,268,3783	1/1:5,9:14:2.03:35,2,0	./.	0/1:11,2:12:0:0,0,0	0/0:19,0:19:57.19:0,57,854	0/0:19,0:17:51.17:0,51,765	0/0:20,0:20:50.30:0,50,844	0/0:12,0:12:5.60:0,6,422
chr10	94178816	.	AAC	A	393.85	PASS	AC=2;AF=0.042;AN=48;BaseQRankSum=3.271;DP=598;FS=1.164;HRun=0;HaplotypeScore=127.5750;InbreedingCoeff=0.5782;MQ=47.28;MQ0=26;MQRankSum=0.728;QD=23.17;ReadPosRankSum=1.725;VQSLOD=4.3312;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:36:57.12:0,57,896	0/0:3,0:3:9.03:0,9,158	0/0:45,0:8:9.01:0,9,127	0/0:57,0:14:13.24:0,13,149	0/0:13,0:12:33.09:0,33,531	0/0:7,0:7:6.02:0,6,87	./.	0/0:27,0:24:69.17:0,69,1095	0/0:22,0:22:56.11:0,56,800	0/0:21,0:19:54.17:0,54,897	0/0:9,0:8:18.04:0,18,268	0/0:8,0:8:3.01:0,3,52	0/0:3,0:3:0.96:0,1,4	0/0:5,0:5:3.01:0,3,52	0/0:26,0:21:42.12:0,42,685	0/0:18,0:17:42.14:0,42,701	1/1:4,13:17:36.12:486,36,0	0/0:20,0:19:51.17:0,51,894	0/0:17,0:16:39.10:0,39,635	0/0:20,0:19:48.16:0,48,841	0/0:122,0:111:99:0,244,4104	./.	./.	./.	0/0:20,0:20:45.10:0,45,728	0/0:20,0:19:54.19:0,54,947	0/0:27,0:27:75.23:0,75,1247	0/0:12,0:11:30.10:0,30,525
chr10	94178857	.	CCACA	C	3499.31	PASS	AB=0.644;AC=17;AF=0.315;AN=54;BaseQRankSum=5.510;DP=542;FS=1.119;HRun=0;HaplotypeScore=109.3098;InbreedingCoeff=0.6995;MQ=45.98;MQ0=81;MQRankSum=0.438;QD=22.72;ReadPosRankSum=3.562;VQSLOD=3.4825;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:39:35.97:0,36,701	1/1:1,5:6:12.04:195,12,0	0/0:43,0:3:6.02:0,6,124	0/0:38,0:4:6.49:0,6,139	1/1:9,10:16:18.01:264,18,0	0/0:2,0:5:3.01:0,3,46	0/0:4,0:5:9.03:0,9,142	0/0:16,0:8:12.04:0,12,287	1/1:6,9:14:32.28:466,32,0	1/1:10,7:15:21.06:300,21,0	1/1:6,6:9:8.78:146,9,0	0/0:5,0:5:3.01:0,3,47	0/0:5,0:6:12:0,12,185	0/0:0,0:2:3.01:0,3,45	1/1:12,8:16:30.05:431,30,0	1/1:5,14:18:39.13:634,39,0	0/0:12,0:11:6.01:0,6,74	0/1:11,14:28:99:722,0,114	0/0:16,0:15:21.07:0,21,470	0/0:24,0:22:42.14:0,42,980	0/0:92,0:88:32.51:0,33,2720	0/0:4,0:3:2.91:0,3,34	./.	0/0:5,0:4:2.81:0,3,68	1/1:6,9:14:21.07:342,21,0	0/0:21,0:20:36.33:0,36,748	0/0:20,0:21:38.59:0,39,707	0/0:13,0:11:18.06:0,18,432
chr10	94178919	.	AAC	A	311.24	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.035;DP=755;FS=0.000;HRun=0;HaplotypeScore=128.5222;InbreedingCoeff=0.8725;MQ=51.13;MQ0=28;MQRankSum=-0.242;QD=25.94;ReadPosRankSum=-0.554;VQSLOD=3.9209;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:40:69.23:0,69,1141	0/0:9,0:9:24.07:0,24,376	0/0:43,0:4:6.02:0,6,84	0/0:49,0:8:11.92:0,12,113	0/0:30,0:30:84.27:0,84,1389	0/0:17,0:17:36.09:0,36,574	0/0:32,0:30:78.25:0,78,1335	0/0:34,0:34:81.14:0,81,1324	0/0:33,0:31:58.44:0,58,986	0/0:41,0:35:99:0,99,1695	0/0:23,0:21:48.16:0,48,823	0/0:9,0:9:24.08:0,24,419	0/0:16,0:16:48.16:0,48,838	0/0:12,0:12:33.11:0,33,578	0/0:38,0:33:63.20:0,63,1028	0/0:17,0:16:36.12:0,36,612	1/1:2,10:12:30.02:406,30,0	0/0:34,0:30:78.27:0,78,1332	0/0:23,0:19:45.13:0,45,737	0/0:18,0:18:48.15:0,48,758	0/0:79,0:75:99:0,183,3021	0/0:17,0:17:48.16:0,48,837	0/0:9,0:9:21.07:0,21,365	0/0:30,0:28:69.71:0,70,1208	0/0:26,0:26:72.21:0,72,1180	0/0:26,0:26:57.19:0,57,974	0/0:14,0:14:39.13:0,39,683	0/0:13,0:13:39.06:0,39,619
chr10	94178960	.	CCA	C	298.35	PASS	AB=0.893;AC=12;AF=0.214;AN=56;BaseQRankSum=-0.141;DP=760;FS=9.104;HRun=0;HaplotypeScore=132.8950;InbreedingCoeff=-0.2226;MQ=49.19;MQ0=69;MQRankSum=1.321;QD=1.12;ReadPosRankSum=3.522;VQSLOD=1.9396;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:36:16.82:0,17,119	0/0:10,0:10:14.99:0,15,127	0/0:35,0:4:8.97:0,9,87	0/0:38,0:1:3:0,3,25	0/0:31,0:30:15:0,15,130	0/1:11,5:16:82.89:83,0,98	0/1:27,4:29:12.66:13,0,376	0/0:30,0:26:24.01:0,24,327	0/0:43,0:42:32.98:0,33,296	0/0:30,0:24:0.64:0,1,120	0/1:17,0:14:0.01:0,0,0	0/1:11,3:14:64.73:65,0,338	0/0:13,1:15:2.43:0,2,387	0/1:13,4:18:95.49:95,0,325	0/0:47,0:43:58.61:0,59,523	0/0:15,0:15:20.99:0,21,177	0/0:26,0:26:24.76:0,25,253	0/1:29,0:24:16.08:16,0,194	0/0:20,0:14:23.90:0,24,264	0/1:7,1:18:11.08:11,0,151	0/0:57,0:70:45.28:0,45,674	0/1:21,4:25:86.90:87,0,375	0/1:10,4:13:18.60:19,0,161	0/1:38,3:41:38.27:38,0,658	0/1:25,0:23:3.47:3,0,62	0/0:10,0:20:33.04:0,33,363	0/0:9,0:13:14.99:0,15,144	0/1:12,1:15:3.66:4,0,291
chr10	94178993	.	C	CAT	2556.37	PASS	AB=0.936;AC=22;AF=0.393;AN=56;BaseQRankSum=14.128;DP=837;FS=11.662;HRun=0;HaplotypeScore=157.5199;InbreedingCoeff=0.5618;MQ=57.79;MQ0=18;MQRankSum=0.047;QD=5.85;ReadPosRankSum=6.390;VQSLOD=1.9191;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:28:32.55:33,0,137	1/1:8,0:8:11.65:68,12,0	0/0:43,0:21:47.18:0,47,519	0/0:42,0:20:48.61:0,49,542	1/1:27,0:27:13.98:99,14,0	0/0:19,0:19:38.79:0,39,351	0/0:30,0:29:58.18:0,58,655	0/0:27,0:23:53.86:0,54,541	1/1:38,2:40:37.65:326,38,0	1/1:28,0:29:52.20:537,52,0	0/1:8,0:8:0.08:0,0,0	0/0:22,0:22:47.51:0,48,523	0/0:22,0:22:20.86:0,21,501	0/0:34,0:34:73.90:0,74,712	1/1:50,0:50:59.63:420,60,0	1/1:25,0:25:17.04:135,17,0	1/1:26,4:30:51.85:503,52,0	1/1:28,1:26:12.68:409,13,0	0/0:32,0:30:57.37:0,57,688	0/1:28,0:28:34.79:35,0,268	0/1:81,0:77:59.19:59,0,989	0/0:36,0:36:75.32:0,75,870	0/0:15,0:14:30.01:0,30,331	0/0:39,0:38:63.11:0,63,907	0/1:9,12:23:10.84:114,0,11	0/1:26,0:26:16.57:17,0,427	0/0:21,0:21:15.31:0,15,275	0/0:18,0:18:1.15:0,1,373
chr10	94178995	.	C	CATAT	7982.78	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-0.769;DP=811;FS=6.821;HRun=0;HaplotypeScore=163.9896;InbreedingCoeff=0.9629;MQ=59.29;MQ0=18;MQRankSum=-1.682;QD=29.90;ReadPosRankSum=1.514;VQSLOD=3.9854;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:29:22.83:0,23,313	1/1:0,6:6:12.04:348,12,0	0/0:40,0:19:35.99:0,36,742	0/0:43,0:22:51.01:0,51,928	1/1:2,23:27:14.93:434,15,0	0/0:18,0:18:35.44:0,35,553	0/0:32,0:31:63.02:0,63,1006	0/0:28,0:24:58.15:0,58,902	1/1:2,35:40:38.80:1008,39,0	1/1:3,23:31:77.79:1282,78,0	1/1:0,2:7:0.47:1,0,0	0/0:22,0:22:48.16:0,48,794	0/0:22,0:22:54.10:0,54,742	0/0:33,0:33:71.46:0,71,1080	1/1:1,45:49:62.30:1593,62,0	1/1:1,22:24:18.53:518,19,0	1/1:24,7:31:69.21:1317,69,0	1/1:23,6:26:68.82:1163,69,0	0/0:31,0:29:78.06:0,78,1211	0/0:26,0:26:48.07:0,48,633	0/0:73,0:70:99:0,147,2043	0/0:35,0:35:89.67:0,90,1413	0/0:15,0:15:30.10:0,30,521	0/0:36,0:36:81:0,81,1326	1/1:20,3:22:19:319,19,0	0/0:25,0:25:63.66:0,64,852	0/0:16,0:16:38.99:0,39,548	0/0:17,0:17:44.92:0,45,672
chr10	94179336	.	CAT	C	8903.80	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=1.460;DP=628;FS=4.719;HRun=0;HaplotypeScore=88.5093;InbreedingCoeff=0.9996;MQ=88.50;MQ0=0;MQRankSum=-5.052;QD=41.41;ReadPosRankSum=4.370;VQSLOD=6.6569;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.26:0,75,1441	1/1:0,14:14:42.14:643,42,0	0/0:22,0:22:60.19:0,60,1119	0/0:24,0:24:69.21:0,69,1227	1/1:1,29:30:84.22:1248,84,0	0/0:31,0:31:93.32:0,93,1750	0/0:10,0:10:27.07:0,27,456	0/0:27,0:27:81.27:0,81,1533	1/1:2,29:31:84.29:1286,84,0	1/1:0,28:28:84.25:1239,84,0	1/1:1,23:23:66.14:981,66,0	0/0:18,0:18:51.16:0,51,948	0/0:28,0:28:81.26:0,81,1528	0/0:17,0:17:48.16:0,48,918	1/1:1,24:25:63.21:964,63,0	1/1:0,29:29:78.26:1194,78,0	0/0:23,0:23:69.24:0,69,1332	1/1:0,9:9:27.09:413,27,0	0/0:14,0:14:42.14:0,42,812	0/0:27,0:27:69.22:0,69,1299	0/0:15,0:15:45.13:0,45,834	0/0:21,0:21:57.18:0,57,1059	0/0:12,0:12:36.12:0,36,695	0/0:19,0:19:57.20:0,57,1089	1/1:0,25:25:63.15:937,63,0	0/0:22,0:22:66.21:0,66,1213	0/0:44,0:43:99:0,132,2515	0/0:14,0:14:42.10:0,42,740
chr10	94180048	.	T	TACTTCAAC	10005.53	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-10.520;DP=444;FS=3.438;HRun=0;HaplotypeScore=100.3262;InbreedingCoeff=0.9780;MQ=71.25;MQ0=0;MQRankSum=-13.155;QD=99.06;ReadPosRankSum=2.505;VQSLOD=5.3817;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:21.07:0,21,511	0/0:7,0:7:21.07:0,21,603	0/0:7,0:7:18.06:0,18,501	0/0:9,0:9:21.07:0,21,519	0/0:28,0:28:84.27:0,84,2236	1/1:5,14:21:51.18:2112,51,0	1/1:1,4:6:15.05:668,15,0	0/0:29,0:29:84.28:0,84,2259	0/0:12,0:12:36.09:0,36,910	0/0:24,0:24:69.24:0,69,1954	0/0:29,0:29:84.29:0,84,2409	1/1:1,8:13:30.10:1253,30,0	1/1:3,12:15:42.14:1711,42,0	1/1:2,9:15:30.10:1256,30,0	0/0:12,0:12:36.12:0,36,1030	0/0:16,0:16:39.12:0,39,1049	0/0:23,0:23:58.82:0,59,1701	0/0:23,0:23:60.13:0,60,1561	0/0:10,0:10:30.03:0,30,681	0/0:29,0:29:87.28:0,87,2422	0/0:4,0:4:12.04:0,12,307	1/1:0,6:8:21.07:838,21,0	1/1:1,17:18:42.14:1767,42,0	1/1:0,3:5:9.03:400,9,0	0/0:19,0:19:57.20:0,57,1588	0/0:13,0:13:39.13:0,39,1068	0/0:28,0:28:84.26:0,84,2249	0/0:14,0:14:42.12:0,42,1140
chr10	94180351	.	TTTC	T	4392.12	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.299;DP=573;FS=17.365;HRun=0;HaplotypeScore=117.6466;InbreedingCoeff=0.9967;MQ=76.11;MQ0=0;MQRankSum=-13.042;QD=41.83;ReadPosRankSum=-3.148;VQSLOD=4.3251;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.25:0,81,1724	0/0:7,0:7:21.06:0,21,434	0/0:21,0:21:35.32:0,35,853	0/0:19,0:19:41.60:0,42,812	0/0:23,0:23:69.24:0,69,1548	1/1:4,17:21:60.19:940,60,0	1/1:1,6:7:18.06:301,18,0	0/0:35,0:35:99:0,102,2173	0/0:24,0:24:72.25:0,72,1633	0/0:36,0:36:99:0,105,2229	0/0:34,0:34:99:0,99,2139	1/1:1,10:11:30.10:484,30,0	1/1:5,14:19:51.05:724,51,0	1/1:1,11:12:36.12:587,36,0	0/0:19,0:19:54.19:0,54,1224	0/0:23,0:23:69.21:0,69,1469	0/0:21,0:22:60.21:0,60,1338	0/0:11,0:11:33.11:0,33,722	0/0:26,0:25:72.25:0,72,1601	0/0:27,0:27:78.27:0,78,1772	0/0:26,0:26:75.26:0,75,1692	1/1:2,6:8:24.03:348,24,0	1/1:2,14:16:45.15:740,45,0	1/1:4,7:11:20.95:267,21,0	0/0:22,0:22:63.15:0,63,1274	0/0:22,0:22:66.22:0,66,1414	0/0:25,0:25:72.25:0,72,1636	0/0:17,0:17:51.18:0,51,1146
chr10	94180361	.	CA	C	4927.43	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=16.877;DP=590;FS=6.534;HRun=1;HaplotypeScore=92.0511;InbreedingCoeff=0.9950;MQ=76.83;MQ0=0;MQRankSum=-12.465;QD=37.05;ReadPosRankSum=-0.516;VQSLOD=4.6369;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:81.27:1124,81,0	0/0:7,0:7:21.07:0,21,332	0/0:25,0:25:75.24:0,75,1157	0/0:18,0:18:51.17:0,51,779	0/0:22,0:22:66.21:0,66,1025	1/1:0,22:22:60.20:827,60,0	1/1:0,8:8:24.08:334,24,0	0/0:33,0:33:99:0,99,1539	0/0:26,0:26:78.23:0,78,1196	0/0:35,0:35:99:0,105,1632	0/0:35,0:35:99:0,105,1622	1/1:0,11:11:33.07:436,33,0	1/1:1,16:17:51.11:645,51,0	1/1:1,12:13:38.86:497,39,0	0/0:21,0:21:63.20:0,63,982	0/0:24,0:24:72.25:0,72,1148	0/0:22,0:22:63.16:0,63,952	0/0:14,0:14:42.12:0,42,635	0/0:27,0:27:81.27:0,81,1269	0/0:29,0:29:87.30:0,87,1384	0/0:27,0:27:78.27:0,78,1239	1/1:0,9:9:24.08:325,24,0	1/1:0,16:16:45.04:579,45,0	1/1:0,9:9:13.28:160,13,0	0/0:23,0:23:69.24:0,69,1098	0/0:25,0:25:75.22:0,75,1114	0/0:28,0:28:84.29:0,84,1334	0/0:16,0:16:48.16:0,48,763
chr10	94180885	.	CT	C	1930.33	PASS	AB=0.638;AC=16;AF=0.286;AN=56;BaseQRankSum=9.845;DP=593;FS=47.936;HRun=8;HaplotypeScore=73.4485;InbreedingCoeff=0.7783;MQ=64.26;MQ0=8;MQRankSum=-2.028;QD=18.38;ReadPosRankSum=2.177;VQSLOD=0.7903;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:32.58:520,33,0	0/0:7,0:7:21.06:0,21,253	0/0:51,1:18:34.14:0,34,300	0/0:48,0:23:1.32:0,1,361	0/0:35,0:35:90.26:0,90,1074	0/1:6,4:10:27.84:116,0,28	1/1:2,8:10:16.10:171,16,0	0/0:28,0:27:66.04:0,66,758	0/0:18,0:18:51.14:0,51,602	0/0:28,0:28:81.25:0,81,979	0/0:27,0:28:78.89:0,79,974	1/1:2,8:10:14.07:219,14,0	1/1:0,9:9:18.03:174,18,0	1/1:2,7:9:12.52:191,13,0	0/0:20,0:20:57.17:0,57,689	0/0:20,0:20:57.16:0,57,677	0/0:19,0:19:36.17:0,36,428	0/0:19,0:20:56.13:0,56,621	0/0:29,0:27:72.22:0,72,869	0/0:28,0:28:69.21:0,69,833	0/0:11,0:11:24.06:0,24,277	1/1:1,14:15:42.07:406,42,0	1/1:2,10:12:24.03:232,24,0	0/1:2,7:9:21.39:101,0,21	0/0:29,0:29:75.23:0,75,906	0/0:26,0:26:69.21:0,69,833	0/0:28,0:28:81.24:0,81,969	0/0:14,0:14:33.10:0,33,398
chr10	94181059	.	GAT	G	3585.78	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.153;DP=512;FS=10.142;HRun=0;HaplotypeScore=59.6955;InbreedingCoeff=0.9905;MQ=85.61;MQ0=0;MQRankSum=-3.327;QD=35.86;ReadPosRankSum=2.019;VQSLOD=5.6473;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.22:0,63,1141	0/0:7,0:7:21.07:0,21,383	0/0:12,0:12:29.92:0,30,547	0/0:21,0:21:50.36:0,50,930	0/0:28,0:28:81.28:0,81,1475	1/1:1,19:20:54.18:773,54,0	1/1:0,10:10:15.05:215,15,0	0/0:31,0:31:90.28:0,90,1553	0/0:18,0:18:51.17:0,51,930	0/0:32,0:32:93.31:0,93,1667	0/0:25,0:25:66.18:0,66,1159	1/1:0,19:19:57.19:816,57,0	1/1:1,15:16:36.08:492,36,0	1/1:0,9:9:27.09:387,27,0	0/0:25,0:25:75.24:0,75,1328	0/0:13,0:13:39.12:0,39,682	0/0:16,0:16:48.16:0,48,863	0/0:16,0:16:48.14:0,48,832	0/0:9,0:9:24.08:0,24,438	0/0:36,0:36:99:0,108,1940	0/0:19,0:19:57.17:0,57,1007	1/1:0,6:6:15.05:215,15,0	1/1:0,13:13:33.11:473,33,0	1/1:1,6:7:15.05:215,15,0	0/0:24,0:24:72.22:0,72,1263	0/0:16,0:16:45.15:0,45,817	0/0:33,0:33:84.24:0,84,1439	0/0:9,0:9:27.09:0,27,492
chr10	94181264	.	CA	C	4745.62	PASS	AB=0.992;AC=26;AF=0.464;AN=56;BaseQRankSum=12.810;DP=549;FS=1.723;HRun=1;HaplotypeScore=92.8360;InbreedingCoeff=0.4971;MQ=71.87;MQ0=3;MQRankSum=-2.388;QD=15.41;ReadPosRankSum=6.137;VQSLOD=4.8604;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:44:99:830,110,0	0/0:6,0:6:0.03:0,0,17	0/0:16,0:12:23.68:0,24,287	0/0:19,0:15:19.95:0,20,279	0/1:39,0:39:26.57:27,0,99	1/1:8,13:20:60.20:824,60,0	1/1:1,14:15:42.14:568,42,0	0/0:16,0:16:48.10:0,48,653	1/1:11,0:11:7.04:17,7,0	0/0:23,0:22:3.31:0,3,159	0/0:24,0:24:0.38:0,0,100	1/1:2,3:5:15.03:187,15,0	1/1:0,8:7:21.07:286,21,0	0/1:20,1:21:39.03:41,0,39	0/1:16,0:16:2.32:2,0,30	1/1:9,0:9:4.66:11,5,0	0/1:25,0:25:16.48:16,0,88	0/1:19,0:19:25.62:26,0,26	0/0:30,0:30:86.18:0,86,1216	0/0:25,0:25:75.18:0,75,1092	0/0:22,0:22:59.54:0,60,823	1/1:6,13:20:60.08:733,60,0	1/1:7,14:22:66.17:865,66,0	1/1:3,7:10:24.07:311,24,0	0/1:22,0:22:2.81:3,0,58	0/0:31,0:31:90.21:0,90,1317	0/0:18,0:18:54.15:0,54,803	0/0:11,0:11:33.03:0,33,466
chr10	94181265	.	AT	A	5671.90	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=9.074;DP=560;FS=4.928;HRun=10;HaplotypeScore=96.7450;InbreedingCoeff=0.9580;MQ=71.05;MQ0=3;MQRankSum=-1.813;QD=16.49;ReadPosRankSum=3.674;VQSLOD=5.2196;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:46,0:45:70.98:219,71,0	1/1:0,5:5:15:130,15,0	0/0:14,2:12:5.70:0,6,162	0/0:19,1:15:21.73:0,22,184	1/1:4,33:37:92.82:786,93,0	1/1:21,0:20:58.27:339,58,0	1/1:16,0:16:24.34:245,24,0	0/0:16,0:16:36.09:0,36,392	1/1:0,11:11:29.99:260,30,0	1/1:6,16:21:47.97:414,48,0	1/1:8,18:26:53.97:469,54,0	1/1:7,0:7:13.21:71,13,0	1/1:11,0:10:5.66:123,6,0	0/0:25,0:25:18.88:0,19,407	1/1:1,13:16:38.03:319,38,0	1/1:0,9:9:26.99:234,27,0	1/1:4,20:24:56.99:495,57,0	1/1:3,16:19:41.99:365,42,0	0/0:30,0:31:51.53:0,52,734	0/0:25,0:25:72.19:0,72,789	0/0:19,1:22:27.80:0,28,494	1/1:21,0:21:46.03:275,46,0	1/1:22,0:22:60.70:361,61,0	1/1:10,0:10:20.44:124,20,0	1/1:2,19:21:50.99:443,51,0	0/0:30,1:31:52.16:0,52,804	0/0:19,0:19:51.11:0,51,552	0/0:11,0:11:27.07:0,27,299
chr10	94181280	.	C	CT	3858.70	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=9.230;DP=553;FS=9.510;HRun=9;HaplotypeScore=98.2308;InbreedingCoeff=0.9114;MQ=61.97;MQ0=5;MQRankSum=-7.552;QD=19.39;ReadPosRankSum=0.954;VQSLOD=3.3627;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,36:45:99:1101,100,0	0/0:5,0:5:11.99:0,12,104	0/0:16,0:10:23.05:0,23,169	0/1:16,0:11:1.39:1,0,54	0/0:34,0:34:77.96:0,78,673	1/1:16,8:23:49.65:511,50,0	1/1:7,11:18:31.90:333,32,0	0/0:18,0:18:44.99:0,45,390	0/0:12,0:12:29.96:0,30,254	0/0:19,0:18:44.20:0,44,371	0/0:22,0:23:59.01:0,59,500	1/1:4,3:7:10.96:122,11,0	1/1:5,7:11:26.45:251,26,0	1/1:2,22:24:45.09:484,45,0	0/0:14,0:14:35.99:0,36,313	0/0:12,0:12:35.99:0,36,312	0/0:25,0:25:62.97:0,63,546	0/0:21,0:21:48.76:0,49,401	0/0:27,0:26:62.90:0,63,536	0/0:22,0:22:56.97:0,57,491	0/0:17,0:18:43.83:0,44,358	1/1:5,13:17:36.09:386,36,0	1/1:10,14:24:2.57:463,3,0	1/1:4,7:11:20.73:206,21,0	0/0:16,0:17:50.03:0,50,423	0/0:35,0:35:83.95:0,84,725	0/0:24,0:24:50.90:0,51,433	0/0:12,0:12:31.55:0,32,264
chr10	94181512	.	C	CTT	7727.28	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=0.291;DP=487;FS=0.000;HRun=8;HaplotypeScore=64.5521;InbreedingCoeff=0.9364;MQ=72.67;MQ0=1;MQRankSum=-0.181;QD=23.56;ReadPosRankSum=1.471;VQSLOD=3.7339;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:21:44.92:155,45,0	1/1:0,6:6:15.05:238,15,0	0/0:9,0:9:12.02:0,12,132	0/0:7,0:6:8.98:0,9,100	1/1:0,31:34:97.97:1389,98,0	1/1:2,0:20:34.93:120,35,0	1/1:1,0:7:12.48:43,12,0	0/0:26,0:26:69.16:0,69,755	1/1:1,13:13:27.09:428,27,0	1/1:3,18:21:54.15:789,54,0	1/1:1,18:20:54.14:830,54,0	1/1:1,0:6:12.48:43,12,0	1/1:0,0:11:27.45:95,27,0	1/1:3,0:17:2:78,2,0	1/1:2,17:19:39.13:619,39,0	1/1:1,16:17:39.13:619,39,0	1/1:4,0:24:33.12:152,33,0	1/1:1,23:26:65.70:970,66,0	0/0:15,0:15:12.78:0,13,359	0/0:27,0:27:75.19:0,75,836	0/0:15,0:16:33:0,33,426	1/1:2,0:13:32.54:113,33,0	1/1:3,0:18:34.93:120,35,0	1/1:1,0:8:17.47:60,17,0	1/1:4,19:24:56.68:866,57,0	0/0:24,1:25:18.55:0,19,655	0/0:23,0:23:63.16:0,63,702	0/0:11,0:11:33.09:0,33,368
chr10	94182351	.	G	GAGGTTGTTGT	11724.82	PASS	AC=18;AF=0.333;AN=54;BaseQRankSum=-7.631;DP=401;FS=9.244;HRun=0;HaplotypeScore=104.4440;InbreedingCoeff=0.9636;MQ=57.53;MQ0=0;MQRankSum=-13.388;QD=109.58;ReadPosRankSum=-0.311;VQSLOD=5.1047;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,6:16:21.07:968,21,0	0/0:6,0:6:18.06:0,18,601	./.	0/0:2,0:3:4.17:0,4,20	0/0:28,0:28:84.29:0,84,2728	1/1:5,13:21:51.18:2486,51,0	1/1:2,5:10:24.08:1110,24,0	0/0:25,0:25:54.19:0,54,1617	0/0:17,0:17:51.17:0,51,1642	0/0:22,0:22:60.21:0,60,2002	0/0:20,0:20:57.20:0,57,1867	1/1:4,6:12:27.09:1265,27,0	1/1:2,7:12:27.09:1347,27,0	1/1:1,7:9:24.08:1221,24,0	0/0:12,0:12:36.12:0,36,1201	0/0:11,0:11:33.10:0,33,966	0/0:25,0:25:75.24:0,75,2351	0/0:7,0:7:21.07:0,21,700	0/0:19,0:19:54.18:0,54,1616	0/0:27,0:27:78.26:0,78,2493	0/0:11,0:11:30.10:0,30,1001	1/1:0,10:12:33.11:1748,33,0	1/1:0,8:11:24.08:1274,24,0	1/1:4,0:4:9.03:305,9,0	0/0:15,0:15:45.15:0,45,1464	0/0:17,0:17:51.17:0,51,1609	0/0:19,0:19:57.19:0,57,1770	0/0:8,0:8:24.07:0,24,714
chr10	94182459	.	ATGGGG	A	2488.44	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=9.026;DP=407;FS=1.229;HRun=0;HaplotypeScore=91.8581;InbreedingCoeff=0.9481;MQ=83.44;MQ0=1;MQRankSum=-10.232;QD=27.96;ReadPosRankSum=1.109;VQSLOD=3.2600;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,7:14:20.94:357,21,0	0/0:8,0:8:21.07:0,21,584	0/0:24,0:20:36.12:0,36,792	0/0:34,0:30:15.38:0,15,722	0/0:28,0:28:69.23:0,69,1884	1/1:1,13:13:21.07:411,21,0	1/1:3,5:8:5.71:116,6,0	0/0:14,0:14:33.10:0,33,720	0/0:12,0:12:30.10:0,30,871	0/0:18,0:18:39.13:0,39,1059	0/0:27,0:27:66.12:0,66,1869	1/1:0,8:8:15.05:294,15,0	1/1:5,3:7:6.02:117,6,0	1/1:2,6:8:15.05:293,15,0	0/0:9,0:9:27.09:0,27,722	0/0:13,0:13:30.10:0,30,851	0/0:16,0:16:39.05:0,39,1010	0/0:5,0:5:15.05:0,15,361	0/0:18,0:18:48.15:0,48,1302	0/0:20,0:20:51.17:0,51,1458	0/0:9,0:9:21.05:0,21,517	1/1:2,7:9:21.07:411,21,0	1/1:5,15:20:39.02:684,39,0	./.	0/0:16,0:16:45.14:0,45,1160	0/0:17,0:17:42.14:0,42,1207	0/0:15,0:15:42.14:0,42,1198	0/0:15,0:15:39.13:0,39,1151
chr10	94182679	.	TTTTTGCTGTTA	T	5792.10	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.460;DP=429;FS=4.136;HRun=0;HaplotypeScore=133.0682;InbreedingCoeff=0.9409;MQ=77.94;MQ0=0;MQRankSum=-11.539;QD=73.32;ReadPosRankSum=2.085;VQSLOD=4.6473;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:30.09:941,30,0	0/0:13,0:13:39.13:0,39,2091	0/0:12,0:12:36.12:0,36,1710	0/0:17,0:17:48.13:0,48,1858	0/0:32,0:32:96.33:0,96,5105	1/1:0,10:10:27.09:964,27,0	1/1:0,10:10:24.08:851,24,0	0/0:33,0:33:93.31:0,93,4253	0/0:23,0:23:69.23:0,69,3578	0/0:13,0:13:39.13:0,39,2221	0/0:29,0:29:87.30:0,87,4705	1/1:0,7:7:15.05:536,15,0	1/1:0,11:11:24.08:862,24,0	1/1:0,12:12:30.10:1069,30,0	0/0:17,0:17:48.16:0,48,2557	0/0:16,0:16:48.16:0,48,2627	0/0:10,0:10:30.06:0,30,1527	0/0:13,0:13:39.13:0,39,1891	0/0:12,0:12:36.12:0,36,1878	0/0:22,0:22:63.22:0,63,3323	0/0:8,0:8:24.08:0,24,1238	1/1:0,4:4:6.02:212,6,0	1/1:0,3:3:3.01:38,3,0	1/1:1,7:8:9.03:320,9,0	0/0:6,0:6:18.06:0,18,1050	0/0:27,0:27:78.27:0,78,4465	0/0:31,0:31:93.31:0,93,4688	0/0:16,0:16:48.10:0,48,2226
chr10	94182891	.	CTGTG	C	3887.06	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.436;DP=461;FS=7.272;HRun=0;HaplotypeScore=82.6769;InbreedingCoeff=0.9701;MQ=78.92;MQ0=0;MQRankSum=-10.669;QD=46.83;ReadPosRankSum=0.577;VQSLOD=3.9577;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:21.03:378,21,0	0/0:7,0:7:18.03:0,18,384	0/0:19,0:19:50.73:0,51,1219	0/0:25,0:25:69.16:0,69,1580	0/0:29,0:29:87.30:0,87,2356	1/1:1,15:16:45.11:835,45,0	1/1:0,5:5:12:199,12,0	0/0:27,0:27:81.25:0,81,1967	0/0:10,0:10:30.10:0,30,838	0/0:22,0:22:66.22:0,66,1793	0/0:18,0:18:54.17:0,54,1442	1/1:0,2:2:6.02:119,6,0	1/1:0,7:7:18.06:359,18,0	1/1:0,10:10:30.10:590,30,0	0/0:16,0:16:48.15:0,48,1233	0/0:19,0:19:57.18:0,57,1498	0/0:19,0:19:57.10:0,57,1367	0/0:17,0:17:45.03:0,45,1100	0/0:23,0:23:69.21:0,69,1613	0/0:31,0:31:90.25:0,90,2232	0/0:23,0:23:69.20:0,69,1728	1/1:1,6:7:15.05:285,15,0	1/1:0,14:14:42.14:823,42,0	1/1:1,12:13:15.05:299,15,0	0/0:17,0:17:51.16:0,51,1332	0/0:21,0:21:63.18:0,63,1522	0/0:24,0:23:72.20:0,72,1901	0/0:11,0:11:30.05:0,30,771
chr10	94182977	.	G	GTAGATGCA	8587.86	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-8.127;DP=424;FS=4.741;HRun=0;HaplotypeScore=102.4059;InbreedingCoeff=0.9690;MQ=72.41;MQ0=0;MQRankSum=-12.385;QD=99.86;ReadPosRankSum=1.462;VQSLOD=5.8503;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:15.05:677,15,0	0/0:15,0:15:45.15:0,45,1288	0/0:13,0:13:36.12:0,36,911	0/0:6,0:6:15.05:0,15,390	0/0:20,0:20:60.21:0,60,1727	1/1:3,15:20:48.16:2167,48,0	1/1:2,4:6:15.05:602,15,0	0/0:24,0:24:66.21:0,66,1720	0/0:17,0:17:51.18:0,51,1487	0/0:19,0:19:54.19:0,54,1552	0/0:21,0:21:63.18:0,63,1649	1/1:2,4:6:12.04:542,12,0	1/1:1,8:9:24.08:1083,24,0	1/1:4,9:13:27.09:1218,27,0	0/0:13,0:13:36.12:0,36,1054	0/0:16,0:16:45.15:0,45,1318	0/0:17,0:17:51.18:0,51,1449	0/0:10,0:10:27.09:0,27,783	0/0:20,0:20:60.20:0,60,1691	0/0:25,0:25:75.26:0,75,2134	0/0:13,0:13:39.13:0,39,1099	1/1:3,6:10:18.06:812,18,0	1/1:1,10:11:27.09:1217,27,0	1/1:3,3:6:6.02:270,6,0	0/0:16,0:16:45.15:0,45,1199	0/0:24,0:24:66.23:0,66,1848	0/0:32,0:31:96.33:0,96,2707	0/0:17,0:17:51.18:0,51,1454
chr10	94184778	.	C	CA	8007.93	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-10.201;DP=608;FS=4.220;HRun=6;HaplotypeScore=58.4532;InbreedingCoeff=0.9994;MQ=69.00;MQ0=1;MQRankSum=-2.159;QD=32.82;ReadPosRankSum=-0.168;VQSLOD=4.8953;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.17:0,75,765	1/1:2,16:18:48.15:604,48,0	0/0:26,0:26:60.11:0,60,605	0/0:15,0:14:33.06:0,33,331	1/1:1,19:20:57.14:699,57,0	0/0:28,0:27:78.15:0,78,783	0/0:11,0:11:30.07:0,30,306	1/1:6,26:32:78.15:933,78,0	1/1:3,13:16:39.12:491,39,0	1/1:4,27:31:84.27:1055,84,0	1/1:3,28:31:75.20:926,75,0	0/0:15,0:15:39.09:0,39,398	0/0:16,0:16:42.09:0,42,428	0/0:26,0:26:75.17:0,75,765	1/1:1,13:15:39.12:486,39,0	1/1:0,16:16:48.15:604,48,0	1/1:2,19:21:57.18:717,57,0	1/1:1,9:10:27.09:340,27,0	0/0:20,0:20:45.09:0,45,459	0/0:41,0:41:99:0,114,1155	0/0:20,0:20:51.12:0,51,520	0/0:28,0:28:78.16:0,78,789	0/0:26,0:26:69.13:0,69,696	0/0:14,0:13:39.09:0,39,398	1/1:0,24:24:69.22:868,69,0	0/0:19,0:19:54.12:0,54,546	0/0:34,0:34:96.22:0,96,979	1/1:1,9:10:24.05:286,24,0
chr10	94185453	.	GCA	G	10047.71	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=18.086;DP=646;FS=11.806;HRun=0;HaplotypeScore=96.1897;InbreedingCoeff=0.9907;MQ=85.22;MQ0=1;MQRankSum=-4.208;QD=38.94;ReadPosRankSum=1.744;VQSLOD=6.5598;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,2584	1/1:0,6:6:18.06:265,18,0	0/0:21,0:21:60.21:0,60,1099	0/0:23,0:22:62.98:0,63,1087	1/1:2,32:34:74.79:1104,75,0	0/0:19,0:19:54.19:0,54,1012	0/0:18,0:18:54.19:0,54,1002	1/1:1,27:28:78.26:1146,78,0	1/1:1,21:22:60.20:883,60,0	1/1:4,32:36:96.31:1394,96,0	1/1:1,24:25:66.21:971,66,0	0/0:19,0:19:57.20:0,57,1060	0/0:20,0:20:60.19:0,60,1091	0/0:20,0:20:60.21:0,60,1105	1/1:1,31:32:87.29:1281,87,0	1/1:2,17:19:51.17:750,51,0	1/1:0,28:28:75.25:1105,75,0	1/1:1,3:4:9.03:133,9,0	0/0:25,0:25:72.25:0,72,1336	0/0:12,0:12:36.12:0,36,674	0/0:44,0:44:99:0,129,2416	0/0:18,0:18:54.19:0,54,1004	0/0:24,0:24:72.25:0,72,1348	0/0:17,0:17:51.17:0,51,943	1/1:0,11:11:30.10:442,30,0	0/0:25,0:25:75.26:0,75,1406	0/0:37,0:37:99:0,111,2057	1/1:0,13:13:39.13:574,39,0
chr10	94185828	.	GAAAGGAAGAAAGGAAGAAAGAAAGAA	G	1252.44	PASS	AB=0.894;AC=15;AF=0.278;AN=54;BaseQRankSum=3.854;DP=215;FS=10.778;HRun=0;HaplotypeScore=126.5534;InbreedingCoeff=0.5086;MQ=38.56;MQ0=8;MQRankSum=-2.926;QD=28.46;ReadPosRankSum=0.949;VQSLOD=2.0340;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:11:33.11:0,33,2341	1/1:0,1:1:3.01:187,3,0	0/0:36,0:6:12.04:0,12,269	0/0:19,0:2:6.02:0,6,140	0/1:7,1:8:19.46:40,0,19	0/0:13,0:13:39.13:0,39,2602	0/0:7,0:6:18.06:0,18,1122	0/1:9,0:8:3.50:29,0,3	0/1:2,1:3:1.13:180,0,1	1/1:6,1:6:14.52:287,15,0	0/1:4,1:5:0.76:44,0,1	0/0:7,0:7:18.06:0,18,1581	0/0:2,0:2:6.02:0,6,261	0/0:5,0:5:15.05:0,15,1130	1/1:0,2:2:6.02:375,6,0	0/1:4,0:4:11.35:42,0,11	0/0:1,0:1:2.68:0,3,11	1/1:2,0:2:6.01:63,6,0	0/0:14,0:11:33.11:0,33,2333	0/0:10,0:10:27.09:0,27,2095	0/0:6,0:6:18.06:0,18,1013	0/0:9,0:7:21.07:0,21,1415	0/0:10,0:10:27.09:0,27,2085	0/0:6,0:5:12.04:0,12,796	1/1:2,1:3:7.24:169,7,0	0/0:9,0:9:27.08:0,27,1295	0/0:5,0:5:15.05:0,15,1185	./.
chr10	94185839	.	AG	A	275.59	PASS	AB=0.744;AC=10;AF=0.179;AN=56;BaseQRankSum=2.264;DP=219;FS=11.469;HRun=2;HaplotypeScore=60.1728;InbreedingCoeff=0.1133;MQ=42.14;MQ0=4;MQRankSum=-2.572;QD=6.12;ReadPosRankSum=-0.442;VQSLOD=-0.7109;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:11:30.06:0,30,423	0/0:5,0:5:11.69:0,12,92	0/0:13,0:5:8.81:0,9,65	0/0:12,0:2:2.04:0,2,6	0/1:6,4:10:18.55:67,0,19	0/0:12,0:12:5.80:0,6,333	0/0:8,0:7:15.04:0,15,207	0/0:12,0:11:13.99:0,14,360	0/1:6,1:7:20.61:21,0,104	0/1:3,4:6:29.09:106,0,29	0/1:3,3:6:7.58:45,0,8	0/0:9,0:9:15.50:0,15,166	0/0:3,0:3:2.96:0,3,41	0/0:5,0:5:6.14:0,6,154	1/1:2,0:2:3.47:9,3,0	1/1:0,2:2:6.02:76,6,0	0/0:2,0:2:5.92:0,6,42	0/1:3,2:5:34.33:66,0,34	0/0:16,0:12:32.23:0,32,296	0/0:11,0:11:22.91:0,23,215	0/0:6,0:6:17.82:0,18,186	0/0:12,0:10:29.97:0,30,337	0/0:11,0:11:27.07:0,27,346	0/0:8,0:7:12.02:0,12,143	0/1:5,1:6:23.60:24,0,69	0/0:9,0:9:26.42:0,26,221	0/0:5,0:5:14.89:0,15,149	0/0:2,0:2:6.02:0,6,84
chr10	94185868	.	G	GA	571.27	PASS	AB=0.859;AC=13;AF=0.232;AN=56;BaseQRankSum=4.351;DP=293;FS=0.000;HRun=3;HaplotypeScore=65.8194;InbreedingCoeff=-0.1235;MQ=66.56;MQ0=2;MQRankSum=-3.651;QD=4.17;ReadPosRankSum=-0.135;VQSLOD=0.0645;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,1:13:4.06:4,0,403	0/0:6,0:6:18.03:0,18,203	0/0:10,0:7:21.06:0,21,248	0/0:10,0:9:8.89:0,9,166	0/0:14,0:13:39.09:0,39,441	0/1:8,4:12:99:144,0,111	1/1:4,1:4:5.05:46,5,0	0/0:22,0:21:50.37:0,50,602	0/0:9,0:9:27.08:0,27,329	0/0:11,0:11:33.10:0,33,397	0/0:6,0:6:18.05:0,18,214	0/1:9,1:10:22.35:53,0,22	0/0:7,0:7:17.99:0,18,202	0/1:3,2:5:33.17:78,0,33	0/0:5,0:5:15.04:0,15,172	0/0:1,0:1:3.01:0,3,36	0/0:9,0:9:27.08:0,27,330	0/0:8,0:8:21.07:0,21,255	0/1:16,3:18:72.55:73,0,487	0/1:12,2:14:4.06:4,0,386	0/1:10,1:11:28.60:29,0,267	0/1:12,3:13:93.78:94,0,263	0/1:12,4:16:99:163,0,184	0/1:10,0:9:1.86:2,0,63	0/0:10,0:10:30.09:0,30,355	0/0:13,0:13:36.11:0,36,443	0/1:5,1:6:28.10:28,0,134	0/0:15,0:15:45.14:0,45,557
chr10	94186808	.	AAGT	A	642.81	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=0.742;DP=553;FS=1.645;HRun=0;HaplotypeScore=94.9424;InbreedingCoeff=0.2570;MQ=44.72;MQ0=28;MQRankSum=1.972;QD=8.93;ReadPosRankSum=-4.375;VQSLOD=1.3929;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:26:36.66:0,37,811	0/0:6,0:6:18.06:0,18,289	0/0:25,0:3:9.02:0,9,175	0/0:14,0:3:6.01:0,6,99	0/0:30,0:30:46.85:0,47,1058	0/1:20,0:16:8.58:9,0,210	0/0:13,0:9:21.02:0,21,310	0/0:22,0:11:30.10:0,30,461	0/0:24,0:21:42.02:0,42,628	0/0:27,0:26:72.71:0,73,1110	0/0:23,0:23:5.30:0,5,756	0/0:13,0:10:16.94:0,17,284	0/1:13,0:12:2.45:2,0,296	0/0:20,0:18:28.98:0,29,490	0/0:20,0:19:42.14:0,42,654	0/0:14,0:13:3.11:0,3,406	1/1:0,27:24:39.13:726,39,0	0/0:20,0:18:37.01:0,37,555	0/0:12,0:7:21.07:0,21,518	0/0:30,0:29:78.22:0,78,1741	0/0:18,0:17:48.16:0,48,1122	0/0:21,0:18:41.92:0,42,693	0/0:23,0:22:0.32:0,0,688	0/0:12,0:11:15.05:0,15,235	0/0:11,0:8:17:0,17,290	0/0:27,0:27:81.26:0,81,1861	0/0:21,0:19:50.96:0,51,1122	0/1:12,0:10:17.90:18,0,302
chr10	94188819	.	T	TA	4430.42	PASS	AB=0.846;AC=25;AF=0.446;AN=56;BaseQRankSum=-8.010;DP=496;FS=2.844;HRun=11;HaplotypeScore=60.0144;InbreedingCoeff=0.8476;MQ=58.95;MQ0=4;MQRankSum=-0.530;QD=18.46;ReadPosRankSum=-1.773;VQSLOD=5.3962;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:50.75:0,51,395	1/1:0,5:5:14.99:141,15,0	0/0:14,0:9:14.84:0,15,111	0/0:8,0:6:2.97:0,3,23	1/1:5,24:29:39.85:575,40,0	0/0:20,0:20:44.75:0,45,345	0/0:10,0:10:20.90:0,21,163	1/1:10,1:18:26.02:161,26,0	1/1:2,14:16:39.08:396,39,0	1/1:4,21:24:57.10:573,57,0	1/1:4,31:36:70.18:677,70,0	0/0:13,0:14:25.94:0,26,192	0/0:6,0:6:11.95:0,12,93	0/0:14,0:14:32.85:0,33,255	1/1:3,6:9:0.80:186,1,0	1/1:4,3:7:9.02:91,9,0	1/1:2,25:27:63.09:629,63,0	1/1:6,16:21:24.86:434,25,0	0/0:22,0:22:51.19:0,51,390	0/0:18,0:18:41.81:0,42,325	0/0:24,0:24:59.76:0,60,464	0/0:18,0:17:38.84:0,39,302	0/0:14,0:15:35.86:0,36,279	0/1:9,2:11:36.99:37,0,115	1/1:4,24:28:45.98:458,46,0	0/0:27,1:29:46.28:0,46,529	0/0:19,0:19:41.83:0,42,325	1/1:1,1:6:11.53:73,12,0
chr10	94189525	.	AACT	A	158.53	PASS	AB=0.937;AC=6;AF=0.125;AN=48;BaseQRankSum=4.210;DP=905;FS=25.834;HRun=0;HaplotypeScore=46.9780;InbreedingCoeff=0.0295;MQ=26.58;MQ0=229;MQRankSum=-3.482;QD=0.98;ReadPosRankSum=2.810;VQSLOD=0.0472;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:16:3.01:0,3,56	0/0:6,0:4:9.03:0,9,192	./.	./.	0/0:32,0:20:32.89:0,33,766	0/0:48,1:18:18.06:0,18,408	./.	./.	0/1:40,2:10:37.84:38,0,253	0/0:48,1:15:45.14:0,45,1003	0/0:22,1:12:18.06:0,18,418	0/1:24,1:12:46.87:47,0,64	0/0:31,1:13:9.03:0,9,194	0/0:23,1:7:9.03:0,9,209	0/0:38,2:14:18.06:0,18,408	0/1:34,4:13:34.83:35,0,320	0/0:66,3:17:3.01:0,3,70	0/0:40,1:16:3.01:0,3,70	0/0:30,2:5:15.05:0,15,350	0/0:23,0:18:45.15:0,45,1021	0/0:44,1:16:3.01:0,3,59	0/0:36,0:25:21.07:0,21,488	0/0:30,0:25:39:0,39,883	1/1:27,3:9:5.98:73,6,0	0/1:24,2:20:81.78:82,0,384	0/0:44,0:17:45.14:0,45,994	0/0:40,1:31:1.10:0,1,1121	0/0:23,2:9:6.02:0,6,140
chr10	94190260	.	TA	T	3798.47	PASS	AB=0.895;AC=25;AF=0.446;AN=56;BaseQRankSum=9.793;DP=537;FS=2.684;HRun=10;HaplotypeScore=55.9652;InbreedingCoeff=0.9105;MQ=52.85;MQ0=9;MQRankSum=1.527;QD=15.63;ReadPosRankSum=1.539;VQSLOD=3.9806;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,1:25:28.58:0,29,539	1/1:0,14:14:41.99:365,42,0	0/0:5,1:4:12.02:0,12,125	0/0:19,0:8:10.97:0,11,168	1/1:4,24:26:53.97:469,54,0	0/0:14,0:14:36.09:0,36,391	0/0:21,1:22:51.12:0,51,555	1/1:5,0:10:14.25:42,14,0	1/1:3,21:24:50.84:443,51,0	1/1:3,22:24:31.84:493,32,0	1/1:4,13:17:29.99:260,30,0	0/0:15,0:15:42.11:0,42,465	0/0:14,0:14:39.09:0,39,424	0/0:17,1:18:19.01:0,19,425	1/1:3,20:23:50.98:443,51,0	1/1:1,9:9:26.99:234,27,0	1/1:3,18:20:38.99:339,39,0	1/1:7,17:24:47.97:417,48,0	0/0:16,0:15:38.94:0,39,412	0/0:31,0:30:78.18:0,78,850	0/0:21,0:22:52.37:0,52,558	0/0:19,0:19:26.20:0,26,455	0/0:30,0:31:63.16:0,63,697	0/0:15,0:16:35.93:0,36,379	1/1:0,12:12:29.99:260,30,0	0/1:15,2:17:6.99:7,0,386	0/0:22,0:22:60.14:0,60,647	1/1:1,0:11:5.71:27,6,0
chr10	94190874	.	GA	G	6149.24	PASS	AC=22;AF=0.407;AN=54;BaseQRankSum=15.139;DP=654;FS=0.000;HRun=3;HaplotypeScore=71.0543;InbreedingCoeff=0.9853;MQ=49.80;MQ0=64;MQRankSum=-4.548;QD=25.20;ReadPosRankSum=2.646;VQSLOD=4.1729;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.22:0,66,950	1/1:2,9:9:18.06:223,18,0	./.	0/0:16,0:4:8.98:0,9,101	1/1:4,29:30:78.24:964,78,0	0/0:18,0:17:51.17:0,51,734	0/0:16,0:14:36.08:0,36,489	1/1:9,13:5:12.04:148,12,0	1/1:1,28:28:54.17:669,54,0	1/1:4,26:26:68.99:840,69,0	1/1:3,23:23:60.19:743,60,0	0/0:16,0:16:42.14:0,42,605	0/0:19,0:18:54.13:0,54,737	0/0:23,0:22:51.13:0,51,733	1/1:0,23:22:57.18:706,57,0	1/1:0,17:17:36.11:446,36,0	0/0:22,0:22:60.16:0,60,841	1/1:2,18:18:48.15:592,48,0	0/0:43,0:17:42.14:0,42,605	0/0:26,0:26:72.23:0,72,1018	0/0:33,0:32:87.28:0,87,1233	0/0:33,0:30:84.28:0,84,1204	0/0:29,0:25:69.23:0,69,991	0/0:20,0:20:60.20:0,60,862	1/1:1,17:17:42.13:520,42,0	0/0:29,0:28:84.27:0,84,1192	0/0:33,0:32:93.29:0,93,1313	1/1:3,12:12:24.08:297,24,0
chr10	94191001	.	AAAG	A	329.63	PASS	AB=0.571;AC=1;AF=0.019;AN=52;BaseQRankSum=1.789;DP=692;FS=1.292;HRun=0;HaplotypeScore=97.1434;InbreedingCoeff=0.1015;MQ=48.20;MQ0=39;MQRankSum=1.505;QD=20.60;ReadPosRankSum=0.568;VQSLOD=3.6103;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,108,2367	0/0:8,0:5:12.04:0,12,264	./.	./.	0/0:45,0:36:93.32:0,93,1971	0/0:9,0:8:21.07:0,21,464	0/0:15,0:14:36.12:0,36,742	0/0:33,0:10:27.09:0,27,588	0/0:37,0:31:69.24:0,69,1523	0/0:34,0:24:72.25:0,72,1590	0/0:26,0:19:54.19:0,54,1188	0/0:18,0:16:42.14:0,42,927	0/0:22,0:19:54.19:0,54,1173	0/0:18,0:16:39.13:0,39,861	0/0:28,0:27:54.19:0,54,1192	0/0:21,0:20:51.17:0,51,1082	0/1:4,12:15:11.30:404,0,11	0/0:24,0:23:54.19:0,54,1191	0/0:34,0:23:54.19:0,54,1174	0/0:31,0:26:69.24:0,69,1506	0/0:41,0:39:99:0,102,2200	0/0:38,0:36:78.27:0,78,1683	0/0:19,0:16:45.07:0,45,941	0/0:16,0:16:39.09:0,39,782	0/0:31,0:23:60.21:0,60,1282	0/0:33,0:28:84.28:0,84,1814	0/0:31,0:28:78.27:0,78,1696	0/0:19,0:19:51.18:0,51,1110
chr10	94191610	.	TC	T	1190.59	PASS	AB=1.000;AC=18;AF=0.346;AN=52;BaseQRankSum=6.064;DP=502;FS=9.383;HRun=1;HaplotypeScore=27.4321;InbreedingCoeff=0.6916;MQ=25.66;MQ0=211;MQRankSum=-5.156;QD=6.37;ReadPosRankSum=-1.492;VQSLOD=-0.7006;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:11:3.21:3,0,104	1/1:6,4:4:5.98:55,6,0	./.	./.	1/1:20,6:7:11.99:166,12,0	0/0:18,0:11:23.78:0,24,310	0/0:16,0:7:12.01:0,12,155	1/1:13,0:6:15.02:192,15,0	0/0:14,0:3:2.97:0,3,39	1/1:17,12:10:24.08:332,24,0	1/1:8,11:11:15.05:206,15,0	0/0:12,0:10:24.08:0,24,310	0/0:9,1:6:9.03:0,9,116	0/1:16,0:12:7.23:7,0,247	1/1:10,0:1:3.01:41,3,0	0/0:11,2:4:0:0,0,0	0/0:22,0:8:15.51:0,16,184	0/0:9,1:2:3.01:0,3,39	0/0:21,0:10:28.33:0,28,353	0/0:25,0:12:24.55:0,25,309	0/0:15,0:9:14.99:0,15,175	0/0:23,0:13:15.05:0,15,194	0/0:18,0:12:17.99:0,18,200	0/0:28,0:13:21.07:0,21,271	1/1:13,11:14:21.07:290,21,0	0/0:26,0:15:45.15:0,45,583	0/0:23,0:18:23.79:0,24,310	1/1:22,0:6:6.02:76,6,0
chr10	94193770	.	T	TC	534.14	PASS	AC=8;AF=0.190;AN=42;BaseQRankSum=4.348;DP=442;FS=45.510;HRun=0;HaplotypeScore=32.4217;InbreedingCoeff=0.8093;MQ=36.23;MQ0=62;MQRankSum=-5.113;QD=10.27;ReadPosRankSum=0.516;VQSLOD=1.7520;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:27:51.06:0,51,667	./.	0/0:13,0:1:3.01:0,3,32	0/0:22,0:5:15.05:0,15,190	1/1:7,9:8:18.06:286,18,0	0/0:21,0:17:39.04:0,39,518	0/0:17,0:14:30.03:0,30,394	./.	./.	1/1:10,5:6:15.05:238,15,0	1/1:11,3:1:3.01:47,3,0	0/0:6,0:5:9.03:0,9,125	0/0:15,0:13:24.08:0,24,334	0/0:16,0:11:18.06:0,18,251	./.	./.	0/0:28,0:24:63.17:0,63,858	./.	0/0:15,0:5:9.03:0,9,126	0/0:31,3:25:60.13:0,60,805	0/0:26,0:21:48.16:0,48,670	0/0:22,0:13:30.10:0,30,418	0/0:13,1:7:12.04:0,12,167	0/0:23,0:18:42.12:0,42,569	1/1:3,4:2:6.02:95,6,0	0/0:33,0:21:54.18:0,54,754	0/0:35,0:30:66.12:0,66,878	./.
chr10	94198236	.	T	TA	784.54	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.535;DP=538;FS=41.566;HRun=6;HaplotypeScore=66.9572;InbreedingCoeff=0.9868;MQ=51.24;MQ0=16;MQRankSum=-5.462;QD=21.20;ReadPosRankSum=-2.220;VQSLOD=0.6317;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,111,1132	0/0:9,0:9:24.05:0,24,245	0/0:25,0:10:27:0,27,255	0/0:28,0:11:32.81:0,33,318	0/0:22,0:21:42.09:0,42,428	0/0:20,0:20:45.10:0,45,459	0/0:11,0:11:24.05:0,24,245	1/1:11,14:21:51.08:604,51,0	0/0:23,0:23:63.14:0,63,643	0/0:23,0:20:54.08:0,54,539	0/0:20,0:20:36.07:0,36,366	0/0:13,0:13:32.98:0,33,337	0/0:15,0:15:42.10:0,42,429	0/0:16,0:16:48.11:0,48,490	0/0:14,0:14:33.07:0,33,336	0/0:14,0:14:33.02:0,33,318	0/0:21,0:21:54.10:0,54,542	0/0:20,0:20:54.12:0,54,551	0/0:21,0:18:51.12:0,51,520	0/0:23,0:23:54.11:0,54,551	0/0:28,0:28:78.16:0,78,787	0/0:16,0:16:30.07:0,30,306	0/0:14,0:13:27.06:0,27,275	0/0:15,0:15:45.10:0,45,459	0/0:6,0:6:15.03:0,15,153	0/0:19,0:19:54.12:0,54,551	0/0:23,0:23:60.14:0,60,612	1/1:2,10:10:24.08:302,24,0
chr10	94198611	.	G	GCAAC	205.27	PASS	AB=0.889;AC=6;AF=0.107;AN=56;BaseQRankSum=1.932;DP=328;FS=1.674;HRun=0;HaplotypeScore=96.9597;InbreedingCoeff=0.1188;MQ=45.99;MQ0=1;MQRankSum=-2.874;QD=3.67;ReadPosRankSum=-1.118;VQSLOD=1.6912;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,3:19:99:153,0,828	0/0:8,0:8:21.07:0,21,428	1/1:9,0:2:2.31:22,2,0	0/0:11,0:4:6.02:0,6,92	0/0:23,0:20:45.12:0,45,900	0/0:17,0:17:51.18:0,51,1057	0/1:7,1:6:60.26:60,0,296	0/0:11,0:9:27.09:0,27,557	0/0:8,0:7:21.07:0,21,440	0/0:10,0:9:27.09:0,27,565	0/0:14,0:12:27.09:0,27,556	0/1:6,1:7:63.29:63,0,356	0/0:7,0:7:21.07:0,21,440	0/0:7,0:7:21.07:0,21,439	0/0:10,0:10:30.10:0,30,622	0/0:7,0:6:18.06:0,18,376	0/0:15,0:15:42.10:0,42,837	0/0:11,0:11:30.10:0,30,629	0/0:14,0:13:39.13:0,39,797	0/0:20,0:20:54.19:0,54,1126	0/0:9,0:8:24.08:0,24,503	0/1:11,1:12:25.80:26,0,531	0/0:8,0:8:21.07:0,21,440	0/0:5,1:6:15.05:0,15,314	0/0:15,0:15:30.10:0,30,615	0/0:12,0:9:27.09:0,27,565	0/0:17,0:17:51.18:0,51,1066	0/0:12,0:12:36.12:0,36,755
chr10	94198619	.	AGG	A	3601.62	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=9.452;DP=342;FS=4.034;HRun=3;HaplotypeScore=75.5091;InbreedingCoeff=0.9644;MQ=46.85;MQ0=1;MQRankSum=-0.902;QD=31.32;ReadPosRankSum=0.783;VQSLOD=3.2666;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:43.74:0,44,865	1/1:0,10:10:24.08:345,24,0	0/0:10,0:3:6.02:0,6,92	0/0:12,0:5:9.03:0,9,146	1/1:1,24:22:48.16:668,48,0	0/0:17,0:17:51.13:0,51,937	0/0:9,0:8:17.29:0,17,345	0/0:12,0:10:30.10:0,30,567	1/1:0,9:8:21.07:298,21,0	1/1:4,8:11:24.08:338,24,0	1/1:1,15:14:27.09:387,27,0	0/0:7,0:7:20.74:0,21,358	0/0:7,0:7:18.06:0,18,347	0/0:7,0:7:21.07:0,21,405	1/1:1,10:11:30.10:429,30,0	1/1:1,6:6:15.05:214,15,0	0/0:17,0:17:48.12:0,48,888	1/1:0,11:11:33.11:474,33,0	0/0:12,0:12:36.12:0,36,670	0/0:20,0:20:60.21:0,60,1158	0/0:9,0:8:24.08:0,24,463	0/0:12,0:12:27.05:0,27,521	0/0:8,0:8:24.08:0,24,456	0/0:7,0:7:18.06:0,18,347	1/1:1,13:14:33.07:447,33,0	0/0:11,0:9:27.09:0,27,521	0/0:18,0:18:54.19:0,54,1031	0/0:14,0:14:39.13:0,39,751
chr10	94199019	.	ATTTCTTCTTG	A	9931.40	PASS	AB=0.962;AC=23;AF=0.411;AN=56;BaseQRankSum=15.245;DP=526;FS=12.343;HRun=0;HaplotypeScore=169.6824;InbreedingCoeff=0.9142;MQ=60.04;MQ0=1;MQRankSum=-13.901;QD=52.27;ReadPosRankSum=3.046;VQSLOD=4.1520;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.20:0,78,3698	1/1:0,6:6:18.06:567,18,0	0/0:30,0:24:53.37:0,53,2018	0/0:20,0:16:45.13:0,45,1775	1/1:1,17:18:42.06:1173,42,0	0/0:40,0:40:99:0,111,5526	0/0:16,0:16:45.15:0,45,2211	1/1:8,9:17:27.05:598,27,0	1/1:3,16:19:36.12:1134,36,0	1/1:6,16:22:48.15:1442,48,0	1/1:1,14:15:38.96:930,39,0	0/0:15,0:15:42.14:0,42,2005	0/0:12,0:12:33.11:0,33,1489	0/0:9,0:9:21.06:0,21,892	1/1:6,16:22:42.14:1322,42,0	1/1:5,14:19:33.11:1039,33,0	0/0:22,0:22:60.19:0,60,2943	1/1:3,3:6:9.03:283,9,0	0/0:16,0:16:36.12:0,36,1751	0/0:19,0:19:57.18:0,57,2545	0/0:23,0:23:63.22:0,63,3131	0/0:28,0:28:81.26:0,81,3699	0/0:20,0:20:57.19:0,57,2543	0/0:10,0:10:21.07:0,21,1082	1/1:2,10:12:27.09:850,27,0	0/1:24,1:25:25.26:25,0,3272	0/0:27,0:27:78.25:0,78,3560	1/1:1,8:9:18.06:567,18,0
chr10	94199874	.	GTTT	G	5553.87	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=11.182;DP=493;FS=1.725;HRun=12;HaplotypeScore=119.2556;InbreedingCoeff=0.9921;MQ=73.36;MQ0=0;MQRankSum=-4.131;QD=27.49;ReadPosRankSum=3.650;VQSLOD=3.9462;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:16:27.09:0,27,391	1/1:0,6:6:15.04:190,15,0	0/0:20,0:19:26.92:0,27,490	0/0:15,0:12:27.25:0,27,396	1/1:6,22:28:57.09:719,57,0	0/0:4,0:23:57.17:0,57,825	0/0:5,0:17:30.09:0,30,445	1/1:7,17:24:50.98:582,51,0	1/1:3,18:21:41.94:530,42,0	1/1:7,19:26:57.13:718,57,0	1/1:1,24:25:60.10:740,60,0	0/0:4,0:12:18.03:0,18,223	0/0:3,0:19:48.04:0,48,667	0/0:2,0:16:36.12:0,36,516	1/1:3,12:15:30.08:379,30,0	1/1:1,12:13:36.11:455,36,0	0/0:16,0:18:51.15:0,51,933	1/1:5,9:14:17.39:293,17,0	0/0:11,0:13:33.11:0,33,568	0/0:21,0:23:60.13:0,60,1073	0/0:11,0:11:27.09:0,27,464	0/0:4,0:16:45.12:0,45,654	0/0:7,0:32:75.79:0,76,1045	0/0:1,0:7:15.05:0,15,215	1/1:3,14:17:42.08:531,42,0	0/0:20,0:20:54.16:0,54,940	0/0:13,0:13:36.12:0,36,675	1/1:2,11:13:33.08:417,33,0
chr10	94200391	.	T	TAA	13027.21	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-16.108;DP=522;FS=1.860;HRun=1;HaplotypeScore=55.5837;InbreedingCoeff=0.9787;MQ=75.28;MQ0=0;MQRankSum=-1.712;QD=55.43;ReadPosRankSum=0.182;VQSLOD=4.5813;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.29:0,84,1359	1/1:0,10:10:27.03:548,27,0	0/0:11,0:11:32.31:0,32,430	0/0:11,0:11:30.06:0,30,408	1/1:0,31:33:93.14:1762,93,0	0/0:23,0:23:63.22:0,63,1027	0/0:6,0:6:18.05:0,18,267	1/1:1,37:38:99:2132,111,0	1/1:0,16:16:45.15:914,45,0	1/1:1,31:32:93.27:1806,93,0	1/1:0,33:33:96.13:1783,96,0	0/0:12,0:12:36.11:0,36,563	0/0:13,0:13:39.13:0,39,633	0/0:16,0:16:48.15:0,48,758	1/1:0,17:17:48.16:975,48,0	1/1:0,15:16:42.14:853,42,0	0/0:15,0:15:45.12:0,45,684	1/1:0,11:11:24.08:486,24,0	0/0:21,0:20:60.20:0,60,957	0/0:37,0:37:99:0,111,1780	0/0:10,0:10:30.10:0,30,485	0/0:14,0:14:42.14:0,42,683	0/0:13,0:13:36.12:0,36,586	0/0:5,0:5:15.05:0,15,244	1/1:0,12:12:36.12:731,36,0	0/0:21,1:22:5.25:0,5,944	0/0:28,0:27:81.28:0,81,1317	1/1:0,17:17:51.18:1036,51,0
chr10	94200522	.	C	CAT	9655.36	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=3.975;DP=550;FS=9.777;HRun=0;HaplotypeScore=70.5934;InbreedingCoeff=0.9823;MQ=82.72;MQ0=2;MQRankSum=-1.046;QD=46.42;ReadPosRankSum=0.890;VQSLOD=5.8696;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.26:0,93,1271	1/1:0,7:7:18.06:330,18,0	0/0:19,0:19:30.46:0,30,572	0/0:20,0:20:39.50:0,40,579	1/1:2,30:32:81.28:1447,81,0	0/0:15,0:15:45.15:0,45,645	0/0:18,0:18:51.17:0,51,727	1/1:4,31:35:96.33:1746,96,0	1/1:0,20:19:48.16:880,48,0	1/1:3,22:26:72.25:1315,72,0	1/1:1,15:17:39.13:693,39,0	0/0:12,0:12:36.12:0,36,515	0/0:17,0:17:51.17:0,51,731	0/0:17,0:17:48.13:0,48,650	1/1:0,20:20:54.19:990,54,0	1/1:1,17:18:42.14:770,42,0	0/0:25,0:25:69.22:0,69,970	1/1:0,9:9:24.08:440,24,0	0/0:18,0:18:51.16:0,51,712	0/0:18,0:18:48.16:0,48,681	0/0:31,0:31:90.29:0,90,1271	0/0:7,0:7:18.06:0,18,256	0/0:23,0:23:66.22:0,66,945	0/0:15,0:15:45.14:0,45,628	1/1:0,19:18:51.17:935,51,0	0/0:27,0:27:75.23:0,75,1040	0/0:26,0:26:78.24:0,78,1097	1/1:0,5:5:6.02:110,6,0
chr10	94200716	.	TA	T	5151.34	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.053;DP=457;FS=0.000;HRun=6;HaplotypeScore=82.2721;InbreedingCoeff=0.9608;MQ=64.43;MQ0=1;MQRankSum=-0.908;QD=26.28;ReadPosRankSum=0.826;VQSLOD=4.8680;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.20:0,81,1017	1/1:0,9:9:27.07:290,27,0	0/0:9,0:7:17.83:0,18,145	0/0:4,0:3:6.02:0,6,78	1/1:3,20:23:57.10:598,57,0	0/0:19,0:19:54.18:0,54,701	0/0:10,0:10:27.07:0,27,336	1/1:3,23:26:69.15:725,69,0	1/1:0,13:13:33.08:354,33,0	1/1:2,21:23:66.13:688,66,0	1/1:0,20:20:54.09:566,54,0	0/0:18,0:18:54.16:0,54,688	0/0:17,0:17:36.09:0,36,440	0/0:13,0:13:36.12:0,36,468	1/1:3,12:15:36.09:386,36,0	1/1:2,14:16:36.09:386,36,0	0/0:11,1:13:4.41:0,4,336	1/1:6,16:22:18.14:353,18,0	0/0:12,0:12:36.11:0,36,457	0/0:26,0:26:78.23:0,78,987	0/0:8,0:8:21.03:0,21,243	0/0:13,0:13:30.07:0,30,361	0/0:18,0:18:51.15:0,51,649	0/0:7,0:7:21.07:0,21,273	1/1:0,20:20:54.14:579,54,0	0/0:21,1:22:33.99:0,34,774	0/0:22,0:22:60.13:0,60,708	1/1:0,9:9:21.05:225,21,0
chr10	94202249	.	CA	C	7756.11	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=17.519;DP=576;FS=0.681;HRun=1;HaplotypeScore=72.4780;InbreedingCoeff=0.9996;MQ=86.65;MQ0=1;MQRankSum=-0.150;QD=37.65;ReadPosRankSum=0.797;VQSLOD=5.3537;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1757	1/1:0,12:12:33.11:461,33,0	0/0:17,0:17:51.16:0,51,791	0/0:21,0:21:59.90:0,60,871	1/1:0,31:31:87.17:1167,87,0	0/0:26,0:26:78.18:0,78,1192	0/0:20,0:20:60.19:0,60,935	1/1:1,24:25:72.21:970,72,0	1/1:0,22:22:57.19:796,57,0	1/1:1,22:23:66.19:886,66,0	1/1:0,16:16:39.13:545,39,0	0/0:21,0:21:63.20:0,63,976	0/0:14,0:14:42.13:0,42,647	0/0:21,0:21:63.21:0,63,1003	1/1:0,18:18:42.14:587,42,0	1/1:0,17:17:51.17:713,51,0	0/0:23,0:22:69.20:0,69,1053	1/1:0,18:18:51.17:712,51,0	0/0:22,0:22:66.22:0,66,1030	0/0:30,0:30:87.30:0,87,1388	0/0:21,0:20:60.20:0,60,956	0/0:18,0:18:54.17:0,54,840	0/0:23,0:23:69.22:0,69,1077	0/0:20,0:20:60.20:0,60,959	1/1:0,16:16:42.14:587,42,0	0/0:19,0:19:57.19:0,57,906	0/0:17,0:17:51.14:0,51,763	1/1:0,8:8:24.08:335,24,0
chr10	94203510	.	ATT	A	4186.90	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=10.947;DP=266;FS=0.000;HRun=3;HaplotypeScore=32.9107;InbreedingCoeff=0.8498;MQ=69.36;MQ0=0;MQRankSum=-1.790;QD=33.77;ReadPosRankSum=0.680;VQSLOD=2.9788;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.09:0,51,807	1/1:0,2:2:6.02:92,6,0	0/0:6,0:5:11.84:0,12,149	0/1:3,0:3:0.82:1,0,52	1/1:1,12:13:24.08:367,24,0	0/0:11,0:11:33.10:0,33,575	0/0:2,0:2:6.01:0,6,85	1/1:0,29:29:87.12:1093,87,0	1/1:0,4:4:9.03:138,9,0	1/1:0,14:14:42.08:596,42,0	1/1:3,6:9:12.04:183,12,0	0/0:3,0:3:8.97:0,9,73	0/0:13,0:13:39.10:0,39,629	0/0:5,0:5:15.05:0,15,290	1/1:0,4:4:3.01:46,3,0	1/1:0,10:10:24.08:367,24,0	0/0:19,0:19:57.13:0,57,892	1/1:0,16:16:36.10:526,36,0	0/0:15,0:15:42.12:0,42,748	0/0:3,0:3:9.01:0,9,105	0/0:6,0:6:18.05:0,18,301	0/0:3,0:3:9.02:0,9,144	0/0:12,0:12:36.10:0,36,631	0/0:4,0:4:12.04:0,12,232	1/1:1,15:16:39.13:596,39,0	0/0:11,0:11:33.10:0,33,576	0/0:11,0:11:33.11:0,33,628	1/1:0,4:4:12.04:183,12,0
chr10	94204589	.	T	TTG	6426.25	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=2.675;DP=499;FS=2.017;HRun=0;HaplotypeScore=112.8341;InbreedingCoeff=0.8001;MQ=68.46;MQ0=7;MQRankSum=-1.620;QD=20.66;ReadPosRankSum=2.077;VQSLOD=5.4884;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,9:24:8.01:650,8,0	1/1:6,0:6:5.99:49,6,0	0/0:36,0:24:35.86:0,36,364	0/0:29,0:19:18.34:0,18,182	1/1:16,0:15:8.18:56,8,0	1/1:11,6:17:45.15:705,45,0	1/1:21,5:25:43.39:685,43,0	1/1:20,0:17:12.48:109,12,0	1/1:15,0:15:6.15:29,6,0	1/1:18,0:18:11.24:107,11,0	1/1:9,0:9:7.32:69,7,0	1/1:9,1:10:13.55:213,14,0	1/1:12,2:14:33.10:495,33,0	1/1:12,1:13:30.09:464,30,0	1/1:12,0:11:2.94:26,3,0	0/1:7,0:7:0.08:0,0,0	1/1:12,3:13:14.94:349,15,0	1/1:3,0:3:5.99:49,6,0	0/0:17,0:17:33.02:0,33,380	0/0:23,0:23:54.05:0,54,609	0/0:39,0:39:90.01:0,90,1022	1/1:20,7:27:71.23:1009,71,0	1/1:14,3:17:27.03:330,27,0	1/1:19,5:24:60.18:916,60,0	1/1:6,0:6:1.96:23,2,0	0/0:26,0:26:69.80:0,70,885	0/0:17,0:17:35.99:0,36,404	1/1:9,0:9:11.95:91,12,0
chr10	94204619	.	GT	G	1239.59	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=7.204;DP=472;FS=2.050;HRun=2;HaplotypeScore=107.9777;InbreedingCoeff=0.7531;MQ=41.50;MQ0=26;MQRankSum=-6.217;QD=15.89;ReadPosRankSum=-2.080;VQSLOD=3.1428;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:20:47.65:0,48,498	1/1:2,4:6:6.02:76,6,0	0/0:60,0:9:17.85:0,18,210	0/0:44,0:3:9.03:0,9,125	1/1:1,8:8:9.03:114,9,0	0/0:15,0:15:2.03:0,2,91	0/0:17,1:18:36.11:0,36,283	1/1:1,9:7:15.05:190,15,0	1/1:2,9:11:18.06:222,18,0	1/1:3,7:9:27.07:322,27,0	1/1:4,3:7:12.02:135,12,0	0/1:7,0:7:17.44:17,0,75	0/0:12,1:12:16.04:0,16,136	0/0:12,1:13:18.21:0,18,124	1/1:0,5:4:12.04:151,12,0	1/1:2,3:4:5.65:76,6,0	0/0:22,0:16:13.98:0,14,164	1/1:0,2:2:6.02:75,6,0	0/0:19,0:14:31.26:0,31,408	0/0:22,0:22:63.53:0,64,848	0/0:50,0:49:99:0,106,1387	0/0:22,0:22:7.96:0,8,157	0/0:13,0:12:15.09:0,15,82	0/0:23,0:21:22.01:0,22,132	1/1:0,2:2:3.01:38,3,0	0/0:25,0:24:30.44:0,30,849	0/0:11,0:11:28.60:0,29,368	1/1:4,0:4:2.98:22,3,0
chr10	94204620	.	TTG	T	1835.84	PASS	AB=0.935;AC=22;AF=0.440;AN=50;BaseQRankSum=6.699;DP=466;FS=7.931;HRun=0;HaplotypeScore=109.8679;InbreedingCoeff=0.5042;MQ=41.39;MQ0=25;MQRankSum=-0.702;QD=8.12;ReadPosRankSum=1.234;VQSLOD=2.8977;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,5:20:2.69:0,3,9	./.	0/0:59,0:9:3.01:0,3,42	0/0:43,0:3:9.03:0,9,126	0/1:9,0:9:0.01:0,0,0	1/1:9,5:14:26.93:251,27,0	1/1:13,6:18:29.90:319,30,0	0/0:10,0:7:0:0,0,0	0/0:10,0:11:2.99:0,3,12	0/0:8,0:9:8.48:0,8,44	0/0:6,0:7:2.74:0,3,12	0/1:5,2:7:10.90:64,0,11	1/1:10,3:12:17.78:178,18,0	1/1:9,4:13:21.03:217,21,0	1/1:5,0:4:2.80:6,3,0	0/0:5,0:5:1.55:0,2,4	1/1:14,6:15:25.26:237,25,0	./.	0/1:19,0:14:37.90:38,0,250	0/0:22,1:23:26.33:0,26,743	0/1:47,2:48:23.56:24,0,801	1/1:12,8:21:28.42:265,28,0	1/1:3,9:11:23.80:195,24,0	1/1:15,7:21:11.97:209,12,0	./.	0/0:23,0:23:38.68:0,39,481	0/0:11,0:11:29.69:0,30,437	0/0:0,0:3:2.90:0,3,16
chr10	94204650	.	GTGTGT	G	352.70	PASS	AB=0.991;AC=17;AF=0.304;AN=56;BaseQRankSum=5.780;DP=413;FS=0.767;HRun=0;HaplotypeScore=132.1698;InbreedingCoeff=0.1669;MQ=38.36;MQ0=27;MQRankSum=-5.480;QD=2.80;ReadPosRankSum=-1.762;VQSLOD=2.2485;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:23:16.79:0,17,166	0/0:6,0:6:1.42:0,1,15	0/0:14,0:2:6.02:0,6,76	0/0:31,0:4:3.01:0,3,40	0/0:8,1:9:1.81:0,2,6	0/1:11,0:11:22.38:22,0,171	0/0:17,0:16:20.60:0,21,148	0/0:5,0:2:3.01:0,3,40	0/1:14,1:15:11.83:58,0,12	1/1:8,2:9:3.81:216,4,0	1/1:8,0:8:0.87:11,1,0	0/1:7,0:7:15.87:16,0,103	0/1:8,0:8:3.74:4,0,211	0/1:15,0:13:14.53:15,0,168	1/1:6,0:6:4.15:15,4,0	1/1:12,1:12:6.35:96,6,0	0/0:20,0:12:1.64:0,2,142	0/0:2,0:2:2.90:0,3,16	0/0:15,0:11:27.02:0,27,498	0/0:25,0:25:66.17:0,66,1357	0/0:56,0:56:99:0,106,2338	0/1:24,0:23:17.09:17,0,293	0/0:17,0:16:0.22:0,0,163	0/0:18,0:15:9:0,9,118	0/1:5,0:5:0.18:0,0,0	0/0:13,0:11:27.09:0,27,712	0/0:12,0:12:33.11:0,33,971	1/1:4,0:4:5.47:28,5,0
chr10	94204654	.	GT	G	529.15	PASS	AB=0.825;AC=20;AF=0.357;AN=56;BaseQRankSum=6.037;DP=411;FS=1.586;HRun=2;HaplotypeScore=119.1971;InbreedingCoeff=-0.0241;MQ=38.20;MQ0=30;MQRankSum=-5.068;QD=2.88;ReadPosRankSum=-1.315;VQSLOD=-0.3890;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:23:19.99:0,20,189	1/1:5,1:6:1.32:3,1,0	0/0:13,0:2:6.01:0,6,69	0/0:27,2:4:3.01:0,3,40	0/0:8,2:10:1.77:0,2,6	0/1:9,2:11:50.31:50,0,164	0/0:10,6:15:20.29:0,20,137	0/0:5,0:2:2.99:0,3,24	0/1:7,7:14:11.69:64,0,12	0/1:8,4:10:20.10:160,0,20	1/1:7,1:8:1.04:32,1,0	0/1:4,3:6:29.12:29,0,65	0/1:8,1:9:17.23:17,0,177	0/1:12,2:12:49.81:50,0,108	1/1:3,4:7:4.55:29,5,0	1/1:10,3:12:5.64:58,6,0	0/1:16,4:12:57.14:57,0,138	0/0:2,0:2:2.90:0,3,16	0/0:14,0:11:27.07:0,27,360	0/0:26,0:26:67.72:0,68,855	0/0:50,4:54:99:0,105,1340	0/1:24,2:25:43.32:43,0,252	0/1:16,1:16:34.95:35,0,137	0/1:13,4:14:21.27:21,0,89	0/0:4,2:6:2.94:0,3,20	0/0:11,0:9:27.08:0,27,375	0/0:13,0:12:33.11:0,33,487	1/1:3,0:3:5.50:36,5,0
chr10	94204655	.	TTGTGTGTGTGTGTGTTGTGTGTG	T	1832.61	PASS	AB=0.902;AC=13;AF=0.241;AN=54;BaseQRankSum=0.582;DP=416;FS=6.576;HRun=0;HaplotypeScore=209.4269;InbreedingCoeff=0.3258;MQ=38.14;MQ0=30;MQRankSum=-3.504;QD=13.00;ReadPosRankSum=-2.495;VQSLOD=1.8129;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:24:19.24:0,19,654	0/0:4,0:5:5.75:0,6,45	./.	0/0:27,0:3:1.25:0,1,3	0/0:8,0:10:12.04:0,12,143	1/1:11,0:11:4.79:371,5,0	1/1:17,0:16:7.79:74,8,0	0/0:7,0:4:9:0,9,82	0/0:13,0:16:9.65:0,10,108	0/0:11,0:9:16.43:0,16,263	0/0:8,0:8:9.02:0,9,101	1/1:8,0:7:11.95:215,12,0	0/1:9,0:9:25.91:243,0,26	0/1:15,0:13:25.22:287,0,25	0/0:8,0:9:10.80:0,11,98	0/0:12,0:12:5.91:0,6,38	0/1:19,0:12:13.75:14,0,289	0/0:2,0:2:3.01:0,3,57	0/0:14,0:11:20.53:0,21,675	0/0:26,0:26:51.17:0,51,3058	0/0:52,0:53:97.57:0,98,5144	0/1:15,11:25:55.57:345,0,56	0/1:13,4:16:6.62:261,0,7	1/1:18,0:15:7.94:180,8,0	0/0:4,0:5:5.68:0,6,86	0/0:11,0:9:24.05:0,24,1024	0/0:13,0:12:33.10:0,33,1542	0/0:0,0:3:8.92:0,9,85
chr10	94204663	.	GTGTGTGT	G	1289.80	PASS	AB=0.991;AC=30;AF=0.556;AN=54;BaseQRankSum=6.822;DP=442;FS=0.000;HRun=0;HaplotypeScore=135.5848;InbreedingCoeff=0.1159;MQ=37.72;MQ0=40;MQRankSum=-7.049;QD=4.66;ReadPosRankSum=-2.269;VQSLOD=2.1889;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:23:19.17:19,0,161	0/1:5,0:5:13.89:15,0,14	./.	0/0:31,0:2:6.01:0,6,98	1/1:11,0:11:11.22:111,11,0	1/1:8,0:8:4.05:87,4,0	0/1:19,0:18:1.07:22,0,1	0/1:10,0:7:19.67:20,0,20	0/1:15,0:15:0.26:60,0,0	0/1:13,0:10:2.32:108,0,2	1/1:9,2:10:8.75:70,9,0	1/1:8,0:7:5.61:45,6,0	0/1:9,0:9:26.75:130,0,27	0/1:15,0:13:9.63:10,0,40	0/1:5,0:8:16.11:135,0,16	1/1:10,7:16:14.53:110,15,0	0/1:26,0:18:99:143,0,148	1/1:3,0:2:2.98:22,3,0	0/0:19,0:15:33.05:0,33,536	0/0:22,0:22:57.18:0,57,1413	0/0:51,0:51:99:0,108,2439	1/1:24,0:23:13.92:113,14,0	0/1:16,0:15:25.90:75,0,26	1/1:18,0:15:4.67:45,5,0	0/1:9,0:7:0.07:91,0,0	0/0:14,0:12:33.08:0,33,718	0/0:13,0:12:36.11:0,36,847	1/1:4,0:3:5.46:27,5,0
chr10	94204665	.	GTGTGT	G	1869.90	PASS	AB=0.946;AC=32;AF=0.593;AN=54;BaseQRankSum=6.474;DP=434;FS=1.248;HRun=0;HaplotypeScore=125.0879;InbreedingCoeff=0.1601;MQ=37.88;MQ0=40;MQRankSum=-5.867;QD=6.77;ReadPosRankSum=-2.496;VQSLOD=2.1900;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,2:22:45.67:46,0,101	0/1:3,2:5:2.62:52,0,3	./.	0/0:29,0:2:6.01:0,6,96	1/1:5,6:11:11.55:205,12,0	1/1:8,0:8:1.15:111,1,0	0/1:18,0:17:1.07:22,0,1	0/1:10,0:7:13.94:64,0,14	1/1:10,5:15:8.71:115,9,0	0/1:10,3:10:10.08:156,0,10	1/1:4,7:10:8.70:125,9,0	1/1:8,0:7:6.01:60,6,0	0/1:9,0:9:35.72:143,0,36	0/1:15,0:13:27.32:27,0,47	0/1:9,0:9:7.24:169,0,7	1/1:17,0:16:12.84:137,13,0	0/1:26,0:19:99:112,0,123	1/1:1,2:2:3.01:62,3,0	0/0:18,0:14:36.06:0,36,477	0/0:21,0:21:57.10:0,57,1126	0/0:51,0:51:99:0,107,2007	1/1:24,0:23:14.89:160,15,0	0/1:16,0:15:22.57:89,0,23	1/1:18,0:15:4.52:49,5,0	1/1:9,0:7:9.60:111,10,0	0/0:14,0:12:33.08:0,33,614	0/0:13,0:12:36.11:0,36,708	1/1:4,0:3:5.47:28,5,0
chr10	94204669	.	GT	G	2198.37	PASS	AB=0.739;AC=35;AF=0.625;AN=56;BaseQRankSum=7.422;DP=435;FS=0.000;HRun=2;HaplotypeScore=110.1417;InbreedingCoeff=0.3835;MQ=38.44;MQ0=42;MQRankSum=-5.636;QD=7.99;ReadPosRankSum=-1.146;VQSLOD=0.4431;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,16:21:16.86:197,17,0	1/1:3,2:5:5.50:46,6,0	0/0:12,0:1:2.50:0,2,9	0/0:26,0:2:6.01:0,6,68	1/1:10,1:11:11.69:148,12,0	1/1:4,5:9:7.73:146,8,0	0/1:8,11:18:1.07:22,0,1	0/1:11,0:7:9.40:200,0,9	1/1:9,4:13:8.87:84,9,0	0/1:11,1:9:18.31:109,0,18	1/1:11,0:10:8.76:85,9,0	1/1:3,5:7:9.03:111,9,0	0/1:3,6:9:43.75:160,0,44	0/1:5,9:12:1.77:62,0,2	0/1:3,7:9:6.11:168,0,6	1/1:11,6:16:15.57:169,16,0	0/1:21,6:20:82.60:83,0,93	1/1:2,1:2:2.90:16,3,0	0/0:18,0:14:35.02:0,35,417	0/0:21,0:21:55.86:0,56,682	0/0:48,2:50:70.18:0,70,1328	1/1:13,10:22:14.91:186,15,0	1/1:6,10:15:9.55:127,10,0	1/1:6,11:14:5.48:70,5,0	1/1:2,7:7:10.46:86,10,0	0/0:16,0:14:36.09:0,36,486	0/0:17,0:16:47.16:0,47,594	1/1:2,3:3:9.02:106,9,0
chr10	94204670	.	T	TG	2264.76	PASS	AB=0.858;AC=37;AF=0.661;AN=56;BaseQRankSum=8.053;DP=436;FS=1.150;HRun=1;HaplotypeScore=109.5360;InbreedingCoeff=0.4769;MQ=38.43;MQ0=41;MQRankSum=-5.906;QD=8.15;ReadPosRankSum=-2.371;VQSLOD=0.0565;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,2:23:15.51:144,16,0	1/1:5,0:5:5.23:44,5,0	0/0:13,0:2:2.49:0,2,9	0/0:27,0:2:6.01:0,6,67	1/1:11,0:11:11.82:148,12,0	1/1:8,1:9:18.80:180,19,0	0/1:15,2:16:1.07:22,0,1	0/1:5,6:7:9.39:221,0,9	1/1:12,0:12:7.32:70,7,0	0/1:12,1:10:19.24:98,0,19	1/1:11,1:11:8.76:85,9,0	1/1:7,1:7:10.84:115,11,0	0/1:8,0:8:43.75:161,0,44	1/1:11,0:12:9.99:95,10,0	1/1:9,0:9:9.70:182,10,0	1/1:16,0:15:15.57:169,16,0	0/1:21,0:20:76.71:77,0,84	1/1:4,0:3:2.92:17,3,0	0/0:17,0:14:34.20:0,34,413	0/0:19,0:20:57.06:0,57,684	0/0:47,1:49:71.67:0,72,1308	1/1:22,0:22:14.91:187,15,0	1/1:14,0:15:15.62:151,16,0	1/1:15,4:17:8.13:88,8,0	1/1:8,1:7:8.28:72,8,0	0/0:14,0:13:36.12:0,36,481	0/0:17,0:16:47.16:0,47,583	1/1:4,1:3:9.03:124,9,0
chr10	94204677	.	TG	T	616.85	PASS	AB=0.871;AC=12;AF=0.214;AN=56;BaseQRankSum=4.531;DP=446;FS=5.155;HRun=1;HaplotypeScore=108.6425;InbreedingCoeff=0.4650;MQ=40.24;MQ0=40;MQRankSum=-3.357;QD=5.18;ReadPosRankSum=-1.319;VQSLOD=-0.1014;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:27:29.53:0,30,402	0/0:5,0:5:5.05:0,5,40	0/0:14,0:5:15.01:0,15,156	0/0:25,0:5:15.03:0,15,182	0/0:11,0:11:11.90:0,12,127	0/1:8,2:10:62.79:63,0,92	1/1:12,7:18:17.88:149,18,0	0/0:14,0:10:30.08:0,30,375	0/0:12,0:12:8.48:0,8,89	0/0:13,0:10:27.07:0,27,350	0/0:14,0:13:15.04:0,15,171	1/1:4,5:8:13.99:126,14,0	0/1:6,2:8:64.27:64,0,86	1/1:10,5:13:7.17:140,7,0	0/0:11,0:10:21.29:0,21,226	0/0:16,0:15:12.49:0,12,123	0/0:30,0:23:43.12:0,43,569	0/0:4,0:3:6:0,6,72	0/0:16,0:13:39.07:0,39,472	0/0:23,0:23:66.79:0,67,869	0/0:45,0:45:99:0,107,1530	0/1:18,2:18:20.73:105,0,21	0/1:15,1:15:38.04:38,0,58	1/1:18,4:18:11.01:98,11,0	0/0:10,0:8:10.69:0,11,85	0/0:14,0:12:33.10:0,33,458	0/0:14,0:13:37.94:0,38,540	0/0:5,0:3:9.03:0,9,134
chr10	94204678	.	G	GT	818.88	PASS	AB=0.901;AC=12;AF=0.214;AN=56;BaseQRankSum=4.782;DP=444;FS=4.715;HRun=1;HaplotypeScore=107.3201;InbreedingCoeff=0.5172;MQ=40.44;MQ0=40;MQRankSum=-5.023;QD=6.94;ReadPosRankSum=-3.225;VQSLOD=-0.4309;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:27:29.28:0,29,360	0/0:5,0:5:2.27:0,2,36	0/0:14,0:5:15.03:0,15,159	0/0:24,0:4:12.04:0,12,150	0/0:11,0:11:11.78:0,12,148	0/1:6,3:10:40.26:70,0,40	1/1:14,6:19:17.88:152,18,0	0/0:14,0:10:30.08:0,30,357	0/0:12,0:12:8.71:0,9,107	0/0:13,0:10:27.08:0,27,330	0/0:14,0:13:15.05:0,15,187	1/1:7,2:8:14.96:163,15,0	0/1:9,0:9:65.90:82,0,66	1/1:12,0:13:19.04:176,19,0	0/0:12,0:11:19.06:0,19,181	0/0:16,0:15:12.43:0,12,123	0/0:29,0:23:41.14:0,41,384	0/0:4,0:3:6.02:0,6,72	0/0:17,0:14:42.05:0,42,464	0/0:23,0:23:68.97:0,69,808	0/0:45,0:45:99:0,108,1365	0/1:17,0:16:19.53:122,0,20	0/1:14,0:15:3.14:74,0,3	1/1:14,6:17:12.24:149,12,0	0/0:10,0:8:10.84:0,11,111	0/0:13,0:11:30.10:0,30,386	0/0:14,0:13:39.02:0,39,480	0/0:5,0:3:9.03:0,9,111
chr10	94204988	.	G	GT	4026.03	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=10.374;DP=341;FS=0.926;HRun=5;HaplotypeScore=50.7608;InbreedingCoeff=0.9897;MQ=83.45;MQ0=0;MQRankSum=-3.363;QD=33.83;ReadPosRankSum=1.014;VQSLOD=3.8637;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:27.07:0,27,288	./.	0/0:14,0:14:39.09:0,39,413	0/0:15,0:15:41.68:0,42,397	1/1:0,11:11:33.06:414,33,0	0/0:19,0:19:57.13:0,57,603	0/0:15,0:15:42.05:0,42,432	1/1:3,22:25:66.20:853,66,0	1/1:5,7:12:18.06:237,18,0	1/1:2,9:11:30.10:392,30,0	1/1:0,15:15:42.14:553,42,0	0/0:6,0:6:15.04:0,15,161	0/0:8,0:8:24.06:0,24,257	0/0:15,0:15:42.11:0,42,451	1/1:0,8:8:21.07:276,21,0	1/1:0,8:8:24.08:316,24,0	0/0:25,0:25:66.12:0,66,690	1/1:0,12:12:36.12:472,36,0	0/0:17,0:17:45.11:0,45,484	0/0:12,0:12:36.09:0,36,387	0/0:11,0:11:33.08:0,33,355	0/0:8,0:8:21.04:0,21,218	0/0:14,0:13:36.09:0,36,387	0/0:7,0:7:15.02:0,15,152	1/1:0,6:6:18.06:237,18,0	0/0:9,0:9:27.07:0,27,290	0/0:17,0:17:45.11:0,45,483	1/1:0,11:11:21.07:276,21,0
chr10	94205094	.	C	CTT	2573.87	PASS	AB=0.848;AC=19;AF=0.339;AN=56;BaseQRankSum=5.775;DP=279;FS=11.259;HRun=3;HaplotypeScore=58.3732;InbreedingCoeff=0.6631;MQ=76.46;MQ0=2;MQRankSum=-4.979;QD=22.38;ReadPosRankSum=1.411;VQSLOD=0.5775;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:30.01:0,30,289	1/1:0,6:6:18.06:329,18,0	0/0:9,0:8:5.88:0,6,43	0/0:8,0:5:8.88:0,9,59	1/1:1,5:6:15.02:240,15,0	0/0:15,0:15:27.05:0,27,283	0/0:6,0:6:15.04:0,15,166	0/1:25,0:24:11.98:12,0,235	1/1:0,7:7:15.05:274,15,0	1/1:7,3:10:8.93:202,9,0	1/1:0,8:8:17.96:258,18,0	0/0:7,0:7:21.03:0,21,214	0/0:4,0:4:6:0,6,58	0/0:10,0:10:14.99:0,15,140	0/1:2,10:12:11.75:457,0,12	1/1:0,3:3:9.03:164,9,0	0/0:20,0:19:44.43:0,44,434	1/1:0,5:5:15.05:275,15,0	0/0:18,0:18:48:0,48,564	0/0:7,0:7:18.03:0,18,218	0/0:15,0:15:39.05:0,39,471	0/0:2,0:2:6.02:0,6,66	0/0:10,0:10:24.02:0,24,231	0/0:1,0:1:3.01:0,3,33	1/1:1,20:21:30.10:549,30,0	0/0:11,0:11:33.06:0,33,410	0/0:7,0:7:21.04:0,21,257	0/1:12,0:12:11:11,0,66
chr10	94205096	.	T	TTATATA	1880.98	PASS	AB=0.962;AC=6;AF=0.115;AN=52;BaseQRankSum=-5.104;DP=277;FS=0.769;HRun=0;HaplotypeScore=86.7428;InbreedingCoeff=0.4592;MQ=77.02;MQ0=2;MQRankSum=-5.500;QD=29.86;ReadPosRankSum=-4.668;VQSLOD=2.1658;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:24.06:0,24,318	0/0:6,0:6:17.74:0,18,122	./.	./.	0/0:5,0:5:14.79:0,15,101	0/0:15,0:15:24.08:0,24,335	0/0:5,0:5:15.05:0,15,207	1/1:17,12:30:54.17:1427,54,0	0/0:7,0:7:14.68:0,15,92	0/1:9,0:9:21.13:21,0,94	0/0:7,0:7:11.67:0,12,74	0/0:7,0:7:18.05:0,18,239	0/0:4,0:4:3.01:0,3,42	0/0:9,0:9:12.04:0,12,159	0/1:11,0:12:61.05:61,0,166	0/0:3,0:3:8.79:0,9,55	0/0:20,0:19:36.12:0,36,502	0/0:5,0:5:14.86:0,15,108	0/0:16,0:17:36.12:0,36,730	0/0:6,0:6:12.04:0,12,255	0/0:13,0:13:27.09:0,27,579	0/0:2,0:2:6.02:0,6,84	0/0:10,0:10:12.04:0,12,168	0/0:1,0:1:3.01:0,3,42	0/0:21,0:21:29.63:0,30,210	0/0:11,0:12:27.08:0,27,518	0/0:8,0:8:15.05:0,15,301	1/1:4,6:10:18.06:504,18,0
chr10	94205707	.	A	AG	4578.91	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.023;DP=611;FS=8.782;HRun=8;HaplotypeScore=83.4719;InbreedingCoeff=0.9872;MQ=89.53;MQ0=0;MQRankSum=-1.411;QD=21.60;ReadPosRankSum=3.205;VQSLOD=5.0094;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:75.01:0,75,682	0/0:10,0:10:27.01:0,27,247	0/0:26,0:27:43.03:0,43,400	0/0:22,0:22:23.49:0,23,324	0/0:21,0:22:44.06:0,44,390	1/1:5,14:19:36.11:415,36,0	1/1:5,19:24:51.15:589,51,0	0/0:22,1:23:44.99:0,45,412	0/0:28,0:28:78.04:0,78,713	0/0:24,0:24:60.02:0,60,549	0/0:13,0:13:30.01:0,30,274	1/1:6,21:27:48.14:554,48,0	1/1:6,23:29:20.67:492,21,0	1/1:2,15:18:42.12:485,42,0	0/0:23,0:23:60.02:0,60,549	0/0:18,0:18:47.99:0,48,430	1/1:28,0:28:74.42:543,74,0	0/0:16,0:16:39.01:0,39,357	0/0:22,0:22:60.01:0,60,544	0/0:21,0:21:48:0,48,435	0/0:34,0:34:77.98:0,78,705	1/1:2,17:19:39.12:450,39,0	1/1:4,14:18:9.16:353,9,0	1/1:5,25:30:38.73:699,39,0	0/0:15,0:15:36.02:0,36,329	0/0:26,0:26:60.01:0,60,543	0/0:21,0:21:60.01:0,60,544	0/0:5,0:5:15.01:0,15,137
chr10	94205711	.	G	GT	1565.97	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=16.368;DP=605;FS=11.063;HRun=0;HaplotypeScore=89.7666;InbreedingCoeff=0.1874;MQ=89.31;MQ0=0;MQRankSum=-4.383;QD=7.60;ReadPosRankSum=6.608;VQSLOD=2.6181;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.21:0,93,1191	0/0:9,0:9:27.09:0,27,377	0/0:28,0:28:69.14:0,69,835	0/0:21,0:21:58.62:0,59,665	0/0:23,0:23:48.06:0,48,629	0/1:17,0:17:16.82:60,0,17	0/1:24,0:24:68.91:74,0,69	0/0:23,0:23:60.14:0,60,757	0/0:27,0:27:81.26:0,81,1115	0/0:24,0:24:67.45:0,67,884	0/0:13,0:13:36.10:0,36,471	0/1:25,0:25:53.09:75,0,53	0/1:25,0:25:24.94:90,0,25	0/1:19,0:19:34.67:78,0,35	0/0:23,0:23:66.20:0,66,890	0/0:19,0:19:57.16:0,57,747	1/1:0,28:28:75.25:1093,75,0	0/0:16,0:16:48.09:0,48,613	0/0:20,0:20:60.20:0,60,836	0/0:24,0:24:66.12:0,66,816	0/0:34,0:34:99:0,99,1265	1/1:21,0:21:7.80:81,8,0	0/1:16,0:16:26.65:63,0,27	0/1:31,0:31:52.15:109,0,52	0/0:13,0:13:39.11:0,39,522	0/0:24,0:24:72.21:0,72,946	0/0:20,0:20:60.09:0,60,810	0/0:6,0:6:18.04:0,18,233
chr10	94205810	.	TG	T	809.43	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.403;DP=674;FS=1.517;HRun=5;HaplotypeScore=72.2701;InbreedingCoeff=0.9918;MQ=91.29;MQ0=0;MQRankSum=-0.655;QD=26.98;ReadPosRankSum=1.298;VQSLOD=3.5602;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1387	0/0:7,0:7:18.06:0,18,246	0/0:30,0:30:65.38:0,65,935	0/0:32,0:31:67.14:0,67,850	0/0:24,0:24:69.23:0,69,939	0/0:18,0:18:51.15:0,51,678	0/0:21,0:21:57.19:0,57,779	0/0:30,0:30:87.28:0,87,1176	0/0:20,0:20:60.20:0,60,817	0/0:35,0:35:96.31:0,96,1294	0/0:22,0:22:66.22:0,66,896	0/0:19,0:19:54.18:0,54,738	0/0:19,0:19:48.16:0,48,656	0/0:21,0:21:60.20:0,60,820	0/0:27,0:27:78.22:0,78,1032	0/0:15,0:15:42.14:0,42,574	1/1:0,30:30:81.19:904,81,0	0/0:20,0:20:51.15:0,51,677	0/0:22,0:22:57.17:0,57,763	0/0:24,0:24:66.22:0,66,902	0/0:27,0:27:72.23:0,72,968	0/0:25,0:25:69.05:0,69,900	0/0:16,0:16:45.07:0,45,572	0/0:33,0:33:87.28:0,87,1171	0/0:20,0:20:54.17:0,54,724	0/0:30,0:30:87.28:0,87,1174	0/0:39,0:39:99:0,114,1535	0/0:11,0:11:33.11:0,33,450
chr10	94205897	.	ACCTC	A	595.35	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.987;DP=662;FS=2.397;HRun=0;HaplotypeScore=108.4581;InbreedingCoeff=0.9989;MQ=87.72;MQ0=0;MQRankSum=-3.482;QD=31.33;ReadPosRankSum=1.259;VQSLOD=3.8575;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,2897	0/0:11,0:11:33.11:0,33,956	0/0:25,0:25:75.24:0,75,1917	0/0:27,0:28:78.22:0,78,1922	0/0:26,0:26:78.27:0,78,2223	0/0:25,0:25:75.26:0,75,2124	0/0:11,0:11:33.11:0,33,952	0/0:31,0:31:93.31:0,93,2543	0/0:19,0:19:57.20:0,57,1610	0/0:31,0:31:93.32:0,93,2627	0/0:25,0:25:75.26:0,75,2125	0/0:17,0:17:51.17:0,51,1379	0/0:19,0:19:57.19:0,57,1549	0/0:19,0:19:57.20:0,57,1627	0/0:26,0:26:75.24:0,75,2052	0/0:21,0:21:63.22:0,63,1808	1/1:2,17:19:37.36:690,37,0	0/0:22,0:22:63.22:0,63,1826	0/0:20,0:20:60.21:0,60,1733	0/0:38,0:38:99:0,114,3289	0/0:31,0:31:93.32:0,93,2696	0/0:24,0:24:72.25:0,72,2077	0/0:25,0:25:75.26:0,75,2124	0/0:32,0:32:96.33:0,96,2746	0/0:24,0:24:69.24:0,69,1987	0/0:24,0:24:72.25:0,72,2075	0/0:24,0:24:72.23:0,72,2018	0/0:10,0:10:30.10:0,30,833
chr10	94206003	.	GA	G	1047.09	PASS	AB=0.970;AC=26;AF=0.464;AN=56;BaseQRankSum=9.241;DP=540;FS=3.134;HRun=1;HaplotypeScore=153.1643;InbreedingCoeff=0.0882;MQ=83.73;MQ0=0;MQRankSum=4.253;QD=3.04;ReadPosRankSum=2.808;VQSLOD=0.2752;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:25.46:51,0,25	0/1:9,1:10:1.74:44,0,2	0/0:24,0:24:68.87:0,69,1057	0/0:18,0:18:54.12:0,54,810	0/1:27,1:28:26.68:27,0,65	1/1:19,2:21:11.03:138,11,0	0/1:15,0:15:11.43:70,0,11	0/1:22,1:23:2.60:64,0,3	0/1:16,1:17:15.01:60,0,15	1/1:18,0:18:6.41:81,6,0	0/1:18,2:20:25.36:95,0,25	0/1:16,0:16:4.76:45,0,5	0/1:12,0:12:7.21:7,0,32	0/1:16,0:16:15.63:39,0,16	1/1:22,1:23:5:119,5,0	1/1:17,0:17:9.49:102,9,0	0/0:31,0:31:93.30:0,93,1459	1/1:14,0:14:12.05:59,12,0	0/0:24,0:24:72.22:0,72,1077	0/0:24,0:24:72.23:0,72,1127	0/0:22,0:22:66.23:0,66,1055	0/1:18,0:17:4.34:43,0,4	0/1:20,1:21:12.27:68,0,12	0/1:13,1:14:3.40:57,0,3	0/1:9,0:9:9.12:20,0,9	0/0:22,0:22:66.21:0,66,1030	0/0:30,0:30:90.27:0,90,1388	1/1:9,0:9:7.83:34,8,0
chr10	94206011	.	GT	G	2233.75	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=9.072;DP=529;FS=3.396;HRun=1;HaplotypeScore=152.5822;InbreedingCoeff=0.7507;MQ=86.65;MQ0=0;MQRankSum=-0.777;QD=6.73;ReadPosRankSum=1.826;VQSLOD=0.9430;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,2:21:21.14:129,21,0	1/1:9,0:9:9.59:71,10,0	0/0:29,1:30:83.92:0,84,1248	0/0:16,0:16:25.64:0,26,611	1/1:27,1:28:17.80:266,18,0	1/1:20,0:20:21.78:139,22,0	1/1:11,3:14:16.46:165,16,0	1/1:20,0:20:14.11:103,14,0	1/1:14,2:16:16.69:132,17,0	1/1:18,0:18:13.28:167,13,0	1/1:20,0:20:5.18:99,5,0	1/1:17,1:18:11.86:126,12,0	0/1:12,0:12:5.52:21,0,6	0/1:15,0:15:0.01:79,0,0	1/1:25,0:25:32.06:252,32,0	1/1:15,1:16:30.63:217,31,0	0/0:30,0:30:90.26:0,90,1365	1/1:12,0:12:16.65:79,17,0	0/0:21,0:21:63.20:0,63,980	0/0:24,0:24:72.21:0,72,1096	0/0:27,0:27:75.26:0,75,1192	1/1:19,0:18:20.22:140,20,0	1/1:18,0:18:0.38:46,0,0	0/1:13,0:13:3.13:19,0,3	1/1:9,0:9:9.49:74,9,0	0/0:21,0:21:63.20:0,63,983	0/0:28,0:28:84.29:0,84,1329	1/1:9,0:9:14.23:111,14,0
chr10	94206295	.	A	ATG	14965.58	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=15.291;DP=547;FS=16.020;HRun=0;HaplotypeScore=138.8597;InbreedingCoeff=0.9972;MQ=83.61;MQ0=3;MQRankSum=-15.606;QD=41.80;ReadPosRankSum=1.847;VQSLOD=5.1694;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:9:24.08:390,24,0	1/1:0,10:10:30.10:499,30,0	0/0:26,0:26:72.23:0,72,1058	0/0:20,0:20:51.16:0,51,745	1/1:4,29:31:44.55:1059,45,0	1/1:1,22:24:57.19:927,57,0	1/1:0,13:13:36.12:612,36,0	1/1:4,29:33:84.69:1493,85,0	1/1:3,13:16:45.13:701,45,0	1/1:3,19:22:57.17:936,57,0	1/1:1,22:23:63.21:1019,63,0	1/1:1,25:26:75.25:1186,75,0	1/1:1,16:17:48.16:775,48,0	1/1:0,11:11:27.09:443,27,0	1/1:0,20:20:35.67:773,36,0	1/1:0,15:15:42.14:686,42,0	0/0:22,0:22:66.21:0,66,980	1/1:0,6:6:18.06:298,18,0	0/0:18,0:18:51.17:0,51,781	0/0:32,0:32:96.33:0,96,1470	0/0:19,0:19:57.19:0,57,871	1/1:2,12:14:36.12:568,36,0	1/1:2,12:13:33.11:540,33,0	1/1:0,10:10:21.07:336,21,0	1/1:0,25:25:75.26:1217,75,0	0/0:21,0:21:63.21:0,63,965	0/0:31,0:31:93.32:0,93,1423	1/1:3,14:17:30.10:506,30,0
chr10	94206298	.	A	AAC	14035.71	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=18.133;DP=578;FS=15.342;HRun=0;HaplotypeScore=158.5502;InbreedingCoeff=0.9979;MQ=84.14;MQ0=3;MQRankSum=-16.513;QD=36.65;ReadPosRankSum=-0.507;VQSLOD=5.2383;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,7:11:30:413,30,0	1/1:2,8:10:21.05:319,21,0	0/0:29,0:29:70.38:0,70,959	0/0:21,0:21:48.10:0,48,625	1/1:10,24:32:75.01:1063,75,0	1/1:7,18:25:66.21:982,66,0	1/1:7,8:15:24.08:356,24,0	1/1:17,22:39:99:1469,100,0	1/1:2,14:16:42.14:636,42,0	1/1:7,14:22:53.65:755,54,0	1/1:8,18:26:57.17:819,57,0	1/1:1,25:26:75.25:1127,75,0	1/1:2,15:17:48.16:732,48,0	1/1:2,9:11:30.10:444,30,0	1/1:7,16:23:54.17:795,54,0	1/1:2,14:16:45.15:700,45,0	0/0:21,0:21:57.14:0,57,775	1/1:1,6:7:21.07:333,21,0	0/0:19,0:19:45.13:0,45,612	0/0:33,0:33:96.32:0,96,1366	0/0:19,0:19:51.17:0,51,731	1/1:4,12:16:34.36:499,34,0	1/1:5,11:15:33.06:496,33,0	1/1:6,8:14:30.06:420,30,0	1/1:1,25:26:78.18:1165,78,0	0/0:22,0:22:63.21:0,63,902	0/0:31,0:31:93.31:0,93,1332	1/1:4,9:13:33.11:514,33,0
chr10	94206908	.	C	CA	819.06	PASS	AB=0.953;AC=44;AF=0.786;AN=56;BaseQRankSum=5.843;DP=449;FS=11.872;HRun=14;HaplotypeScore=135.2317;InbreedingCoeff=0.2012;MQ=47.64;MQ0=6;MQRankSum=-5.772;QD=1.96;ReadPosRankSum=1.777;VQSLOD=-0.5181;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:22:13.61:93,14,0	1/1:9,0:9:8.04:22,8,0	0/1:19,0:9:5.25:5,0,85	0/0:22,0:5:2.63:0,3,19	1/1:23,0:21:29.46:108,29,0	1/1:16,0:16:13.51:43,14,0	1/1:16,0:13:11.36:41,11,0	1/1:19,0:19:17.18:49,17,0	1/1:21,0:20:18.17:50,18,0	1/1:26,0:26:32.90:96,33,0	1/1:18,0:18:19.14:70,19,0	0/1:10,0:10:2.03:2,0,5	1/1:10,0:10:17.73:55,18,0	1/1:10,0:10:13.14:40,13,0	1/1:18,0:18:13.19:36,13,0	1/1:17,0:16:10.30:31,10,0	0/1:8,12:20:17.57:18,0,22	1/1:10,0:11:7.64:23,8,0	0/1:18,0:17:22.65:23,0,40	0/1:22,0:21:6.73:7,0,38	0/0:10,0:10:4.55:0,5,27	0/1:9,0:9:0.18:11,0,0	1/1:7,0:7:2.22:7,2,0	1/1:10,0:10:6.66:20,7,0	1/1:12,0:12:20.51:64,21,0	0/1:19,0:17:31.41:44,0,31	0/1:27,0:27:3.30:3,0,82	1/1:3,0:3:1.55:4,2,0
chr10	94206914	.	A	ACAACAACAACAAC	12189.05	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=0.882;DP=464;FS=8.369;HRun=0;HaplotypeScore=161.2416;InbreedingCoeff=0.5395;MQ=48.07;MQ0=4;MQRankSum=-9.044;QD=39.19;ReadPosRankSum=7.713;VQSLOD=3.0528;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:21:57.51:1880,58,0	0/1:8,0:8:29.56:188,0,30	0/0:18,0:10:27.01:0,27,579	0/0:17,0:6:7.08:0,7,158	0/1:21,0:21:61.09:318,0,61	1/1:0,11:25:18.06:995,18,0	1/1:0,9:17:17.99:829,18,0	1/1:5,0:21:56.98:940,57,0	1/1:20,0:20:8.43:388,8,0	1/1:24,0:24:62.81:838,63,0	0/1:12,0:12:15.03:204,0,15	1/1:0,7:12:6.02:367,6,0	1/1:1,7:15:23.92:1490,24,0	1/1:1,9:16:17.85:1124,18,0	1/1:16,0:16:7.18:272,7,0	0/1:15,0:15:29.52:204,0,30	0/0:19,0:19:18.03:0,18,421	0/1:12,0:12:2.22:135,0,2	0/0:21,0:18:54.09:0,54,1085	0/0:21,0:20:60.15:0,60,1284	0/0:11,0:11:27.52:0,28,452	1/1:2,6:14:14.48:751,14,0	1/1:0,2:9:3.01:188,3,0	1/1:1,7:13:8.97:560,9,0	1/1:12,0:12:30.10:439,30,0	0/0:18,0:17:51.63:0,52,1195	0/0:28,0:28:80.78:0,81,1866	1/1:0,0:3:3.01:80,3,0
chr10	94206915	.	A	AC	54.48	PASS	AB=0.639;AC=1;AF=0.018;AN=56;BaseQRankSum=4.386;DP=447;FS=3.102;HRun=0;HaplotypeScore=126.9547;InbreedingCoeff=0.2187;MQ=47.79;MQ0=4;MQRankSum=-2.319;QD=2.37;ReadPosRankSum=-0.892;VQSLOD=3.1088;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,13:21:11.28:128,0,11	0/0:8,0:8:13.60:0,14,95	0/0:19,0:11:25.35:0,25,244	0/0:17,0:6:11.95:0,12,121	0/0:22,0:22:38.17:0,38,230	0/0:23,0:23:6.51:0,7,19	0/0:15,0:14:4.75:0,5,13	0/0:22,0:20:31.94:0,32,174	0/0:24,0:23:28.94:0,29,154	0/0:27,0:27:55.12:0,55,312	0/0:11,0:11:16.10:0,16,87	0/0:9,0:9:3.88:0,4,27	0/0:13,0:13:7.95:0,8,20	0/0:15,0:15:8.06:0,8,25	0/0:17,0:17:23.21:0,23,126	0/0:15,0:15:10.31:0,10,81	0/0:19,0:19:15.48:0,15,156	0/0:12,0:12:10.51:0,11,78	0/0:20,0:17:47.40:0,47,457	0/0:21,0:20:59.63:0,60,511	0/0:11,0:11:29.90:0,30,261	0/0:11,0:11:5.18:0,5,30	0/0:6,0:6:0.47:0,0,1	0/0:9,0:9:3.38:0,3,9	0/0:12,0:12:7.88:0,8,90	0/0:17,0:16:44.47:0,44,414	0/0:27,0:27:71.78:0,72,644	0/0:2,0:2:1.25:0,1,3
chr10	94206917	.	A	ACAACAAC	14004.31	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-0.521;DP=453;FS=5.734;HRun=0;HaplotypeScore=114.6277;InbreedingCoeff=0.9003;MQ=46.85;MQ0=4;MQRankSum=-7.077;QD=46.07;ReadPosRankSum=7.678;VQSLOD=3.8962;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:21:59.64:1545,60,0	1/1:0,7:7:15.05:560,15,0	0/0:19,0:11:27.09:0,27,562	0/0:14,0:6:13.67:0,14,237	1/1:0,16:20:42.02:893,42,0	1/1:23,0:23:18.05:482,18,0	1/1:13,0:12:12.04:365,12,0	1/1:24,0:22:59.81:1003,60,0	1/1:0,23:24:30.10:1118,30,0	1/1:1,23:28:71.82:2177,72,0	1/1:1,7:12:24.08:579,24,0	1/1:10,0:10:5.86:166,6,0	1/1:12,0:13:24.08:733,24,0	1/1:16,0:16:20.89:570,21,0	1/1:0,16:18:24.08:830,24,0	1/1:0,14:15:15.05:554,15,0	0/0:20,0:20:21.04:0,21,361	1/1:2,6:13:17.78:463,18,0	0/0:20,0:17:51.17:0,51,1055	0/0:21,0:20:57.19:0,57,1169	0/0:11,0:11:30.07:0,30,488	1/1:13,0:13:17.44:374,17,0	1/1:7,0:7:2.85:91,3,0	1/1:9,0:9:11.93:289,12,0	1/1:1,12:13:29.90:1102,30,0	0/0:17,0:16:51.09:0,51,914	0/0:27,0:27:77.85:0,78,1603	1/1:2,0:2:3.01:110,3,0
chr10	94206922	.	AC	A	1257.09	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-12.011;DP=437;FS=5.238;HRun=1;HaplotypeScore=125.2143;InbreedingCoeff=0.8598;MQ=48.39;MQ0=3;MQRankSum=5.904;QD=11.22;ReadPosRankSum=-4.491;VQSLOD=0.2601;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:52.42:0,52,429	0/0:7,0:7:16.97:0,17,119	0/0:20,0:12:26.09:0,26,277	0/0:12,0:7:16.20:0,16,150	0/0:14,0:14:32.14:0,32,219	0/0:25,0:25:20.24:0,20,137	0/0:14,0:13:14.90:0,15,108	0/0:25,0:24:67.15:0,67,444	0/0:22,0:21:32.82:0,33,244	0/0:26,0:26:67.02:0,67,500	0/0:12,0:12:24.80:0,25,156	0/0:7,0:7:8.96:0,9,73	0/0:15,0:15:23.80:0,24,167	0/0:16,0:16:23.84:0,24,172	0/0:15,0:15:23.88:0,24,181	0/0:13,0:13:17.88:0,18,131	0/1:18,0:18:1.04:101,0,1	0/0:9,0:9:14.42:0,14,97	1/1:18,2:18:41.70:319,42,0	1/1:20,1:20:46.52:309,47,0	1/1:10,0:10:15.41:105,15,0	0/0:15,0:15:32.74:0,33,245	0/0:9,0:9:14.95:0,15,115	0/0:9,0:9:8.93:0,9,62	0/0:15,0:15:38.69:0,39,283	1/1:13,1:13:27:201,27,0	1/1:28,1:29:58.18:398,58,0	0/0:2,0:2:2.98:0,3,22
chr10	94207099	.	C	CT	5719.77	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=12.946;DP=387;FS=14.610;HRun=6;HaplotypeScore=85.4031;InbreedingCoeff=0.9600;MQ=71.80;MQ0=0;MQRankSum=-6.288;QD=22.70;ReadPosRankSum=3.290;VQSLOD=3.4463;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,1:22:33.08:180,33,0	1/1:3,12:15:27.02:313,27,0	0/0:14,0:13:21.89:0,22,198	0/0:9,0:9:11.75:0,12,123	1/1:3,17:20:45:502,45,0	1/1:4,9:12:24.08:296,24,0	1/1:2,9:11:27.08:331,27,0	1/1:8,1:20:31.55:176,32,0	1/1:3,14:17:36.58:443,37,0	1/1:1,15:16:48.15:586,48,0	1/1:2,11:13:27.04:314,27,0	1/1:2,6:8:12.04:148,12,0	1/1:2,7:9:21.07:258,21,0	1/1:1,7:8:18.06:221,18,0	1/1:1,5:6:12.04:148,12,0	1/1:1,4:5:9.03:110,9,0	0/0:18,0:18:48.07:0,48,475	1/1:1,6:7:18.06:221,18,0	0/0:15,0:15:36.08:0,36,367	0/0:13,0:13:27:0,27,258	0/0:23,0:22:60.12:0,60,607	1/1:2,14:16:36.58:441,37,0	1/1:5,10:15:24.07:292,24,0	1/1:0,6:6:15.05:184,15,0	1/1:1,15:16:36.11:441,36,0	0/0:15,1:16:11.25:0,11,407	0/0:27,0:27:81.17:0,81,820	1/1:1,0:9:22.73:114,23,0
chr10	94208201	.	C	CTT	24141.15	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=12.621;DP=708;FS=13.055;HRun=2;HaplotypeScore=113.8041;InbreedingCoeff=0.9981;MQ=75.79;MQ0=1;MQRankSum=-6.171;QD=49.37;ReadPosRankSum=3.005;VQSLOD=3.5370;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,55:56:99:2576,135,0	1/1:1,10:11:24.08:459,24,0	0/0:37,0:37:96.32:0,96,1449	0/0:25,0:25:59.37:0,59,914	1/1:1,20:21:54.10:949,54,0	1/1:2,22:25:66.19:1238,66,0	1/1:0,20:20:57.20:1100,57,0	1/1:7,33:39:99:2033,111,0	1/1:2,30:32:84.29:1606,84,0	1/1:3,19:22:63.13:1128,63,0	1/1:1,27:28:81.18:1466,81,0	1/1:1,26:27:72.25:1387,72,0	1/1:0,26:27:66.23:1275,66,0	1/1:0,25:26:63.22:1217,63,0	1/1:1,27:28:78.27:1504,78,0	1/1:2,19:21:60.17:1118,60,0	0/0:24,0:24:66.21:0,66,986	1/1:2,20:22:48.12:889,48,0	0/0:16,0:17:48.16:0,48,732	0/0:32,0:32:93.30:0,93,1400	0/0:38,0:38:99:0,111,1676	1/1:1,15:16:48.12:889,48,0	1/1:1,24:25:59.37:1282,59,0	1/1:0,21:22:51.17:985,51,0	1/1:1,13:14:39.09:694,39,0	0/0:30,1:31:26.26:0,26,1133	0/0:15,0:15:42.14:0,42,643	1/1:0,6:6:18.06:348,18,0
chr10	94208393	.	AAC	A	12232.55	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=7.156;DP=568;FS=0.766;HRun=0;HaplotypeScore=100.4423;InbreedingCoeff=0.9956;MQ=69.54;MQ0=3;MQRankSum=-4.003;QD=30.74;ReadPosRankSum=1.990;VQSLOD=6.5431;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:69.18:874,69,0	1/1:4,4:8:24.03:268,24,0	0/0:33,0:26:58.78:0,59,793	0/0:21,0:14:20.47:0,20,213	1/1:5,18:23:65.95:746,66,0	1/1:10,19:29:81.18:966,81,0	1/1:5,9:14:35.83:414,36,0	1/1:2,24:26:69.13:807,69,0	1/1:6,11:16:39.08:485,39,0	1/1:6,17:23:66.19:819,66,0	1/1:9,19:28:74.97:823,75,0	1/1:9,3:12:27.03:273,27,0	1/1:5,14:19:51.07:598,51,0	1/1:3,13:16:47.94:559,48,0	1/1:6,12:18:51.05:594,51,0	1/1:5,14:19:48.11:590,48,0	0/0:20,0:20:54.13:0,54,824	1/1:4,6:10:24.04:278,24,0	0/0:19,0:19:57.16:0,57,875	0/0:24,0:24:66.21:0,66,1055	0/0:5,0:5:15.04:0,15,212	1/1:6,20:26:78.11:913,78,0	1/1:4,16:21:57.04:654,57,0	1/1:7,9:16:39.01:427,39,0	1/1:3,21:24:63.08:758,63,0	0/0:25,0:25:69.08:0,69,1067	0/0:23,0:23:50.80:0,51,741	1/1:6,12:18:30.10:388,30,0
chr10	94208435	.	AC	A	5507.67	PASS	AB=0.930;AC=49;AF=0.875;AN=56;BaseQRankSum=1.650;DP=480;FS=3.701;HRun=12;HaplotypeScore=105.0373;InbreedingCoeff=0.5134;MQ=61.90;MQ0=0;MQRankSum=-0.667;QD=12.46;ReadPosRankSum=3.761;VQSLOD=4.8677;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:20.59:0,21,127	1/1:3,6:9:20.90:159,21,0	0/1:29,1:18:6.77:7,0,74	0/1:20,0:17:12:12,0,95	1/1:6,17:23:48.28:372,48,0	1/1:5,17:23:52.82:399,53,0	1/1:4,12:16:35.86:278,36,0	0/0:17,0:17:19.81:0,20,101	1/1:2,15:17:47.81:371,48,0	1/1:4,18:22:56.78:440,57,0	1/1:7,18:25:51.59:396,52,0	1/1:1,8:9:20.92:162,21,0	1/1:2,13:15:38.85:301,39,0	1/1:5,11:16:30.35:232,30,0	1/1:5,13:18:41.78:322,42,0	1/1:2,13:15:32.86:255,33,0	1/1:8,7:17:18.97:127,19,0	1/1:2,7:9:20.92:163,21,0	1/1:5,4:9:16.81:110,17,0	1/1:12,3:17:10.01:58,10,0	1/1:4,3:7:8:52,8,0	1/1:6,15:21:44.81:348,45,0	1/1:8,9:18:32.35:238,32,0	1/1:7,8:15:20.80:162,21,0	1/1:6,12:18:38.74:296,39,0	1/1:12,4:17:7.99:52,8,0	1/1:10,9:21:24.93:172,25,0	0/1:11,2:13:22.56:23,0,113
chr10	94211241	.	A	AT	3852.35	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=6.333;DP=629;FS=8.528;HRun=10;HaplotypeScore=142.0204;InbreedingCoeff=0.8050;MQ=71.50;MQ0=1;MQRankSum=-6.413;QD=13.52;ReadPosRankSum=0.337;VQSLOD=2.2232;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,21:30:54.48:470,54,0	0/0:6,0:6:1.87:0,2,11	0/0:19,0:18:29.83:0,30,233	0/0:17,0:16:15.22:0,15,147	0/1:50,0:50:5.53:6,0,53	1/1:5,13:18:41.94:382,42,0	1/1:8,6:14:32.01:285,32,0	0/0:22,0:22:41.21:0,41,267	0/0:20,0:20:22.36:0,22,71	0/0:38,0:38:65.41:0,65,303	0/1:26,0:26:6.14:6,0,35	1/1:6,16:22:54.06:487,54,0	1/1:6,17:23:53.15:474,53,0	1/1:3,9:12:32.87:273,33,0	0/0:23,0:23:26.30:0,26,95	0/0:16,0:16:10.34:0,10,78	0/0:32,0:32:80.88:0,81,665	1/1:19,0:18:5.27:36,5,0	0/0:27,1:29:43.91:0,44,534	0/0:32,0:32:74.76:0,75,607	0/0:11,0:11:27.83:0,28,220	1/1:8,16:25:48.90:477,49,0	1/1:4,17:22:56.52:462,57,0	1/1:7,17:24:57.30:495,57,0	0/0:19,0:19:3.99:0,4,43	0/0:23,0:24:60.82:0,61,464	0/0:27,0:27:62.80:0,63,507	0/0:8,0:8:17.93:0,18,140
chr10	94211251	.	T	TTC	7445.87	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=0.948;DP=623;FS=2.526;HRun=0;HaplotypeScore=136.3451;InbreedingCoeff=0.4842;MQ=65.88;MQ0=1;MQRankSum=-5.946;QD=18.90;ReadPosRankSum=-1.382;VQSLOD=4.6357;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:68.89:974,69,0	0/0:6,0:6:2.71:0,3,7	0/0:19,0:16:32.11:0,32,336	0/0:16,0:15:21.92:0,22,253	0/1:48,0:48:9.72:10,0,41	1/1:13,4:17:42.14:724,42,0	1/1:15,0:15:31.27:428,31,0	0/1:25,0:25:35.44:73,0,35	0/1:20,0:20:3.23:3,0,29	0/1:36,0:36:1.62:2,0,156	0/1:30,0:30:14.80:57,0,15	1/1:24,0:24:52.49:877,52,0	1/1:22,0:22:66.07:990,66,0	1/1:12,0:12:35.96:526,36,0	0/0:21,0:21:22.47:0,22,77	0/0:14,0:14:11.89:0,12,45	0/0:29,0:29:87.26:0,87,1171	0/1:22,0:21:14.63:15,0,17	0/0:33,0:33:97.46:0,97,1145	0/0:32,0:32:87.18:0,87,1126	0/0:10,0:10:30.05:0,30,379	1/1:20,0:20:52.50:880,52,0	1/1:22,0:22:63.07:978,63,0	1/1:26,0:26:56.96:889,57,0	0/1:17,0:17:13.34:15,0,13	0/0:27,0:27:79:0,79,922	0/0:22,0:22:62.19:0,62,828	0/1:8,0:8:5.39:5,0,25
chr10	94211254	.	C	CT	16074.90	PASS	AB=0.929;AC=41;AF=0.732;AN=56;BaseQRankSum=5.468;DP=616;FS=0.691;HRun=0;HaplotypeScore=91.9947;InbreedingCoeff=0.9051;MQ=66.20;MQ0=1;MQRankSum=-0.674;QD=35.49;ReadPosRankSum=4.715;VQSLOD=4.4273;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:66.22:923,66,0	1/1:0,6:6:18.06:287,18,0	0/0:17,0:15:41.59:0,42,465	0/0:17,0:16:32.73:0,33,348	1/1:0,50:50:99:2028,132,0	1/1:4,13:17:45:611,45,0	1/1:3,12:15:24.07:333,24,0	1/1:23,0:23:60.15:699,60,0	1/1:0,19:19:57.19:910,57,0	1/1:1,34:35:99:1581,102,0	1/1:0,28:28:81.26:1204,81,0	1/1:0,22:22:54.18:781,54,0	1/1:6,17:23:69.22:995,69,0	1/1:1,9:10:30.10:423,30,0	1/1:0,20:20:51.17:814,51,0	1/1:2,11:13:30.08:435,30,0	0/0:30,0:30:87.29:0,87,1210	1/1:2,20:21:15.02:729,15,0	0/0:35,0:35:95.10:0,95,1250	0/0:29,0:29:87.28:0,87,1186	0/0:10,0:10:27.09:0,27,374	1/1:0,19:19:57.19:840,57,0	1/1:1,23:24:63.02:864,63,0	1/1:2,24:26:54.18:767,54,0	1/1:1,16:17:42.13:645,42,0	0/1:24,2:26:17.71:18,0,875	0/0:25,0:25:60.15:0,60,780	1/1:8,0:8:20.97:189,21,0
chr10	94211892	.	T	TTTC	23693.25	PASS	AB=0.889;AC=41;AF=0.732;AN=56;BaseQRankSum=-14.335;DP=579;FS=0.676;HRun=0;HaplotypeScore=72.8854;InbreedingCoeff=0.9069;MQ=70.29;MQ0=0;MQRankSum=-4.835;QD=57.93;ReadPosRankSum=3.321;VQSLOD=6.8711;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:30.06:684,30,0	1/1:0,12:12:33.58:808,34,0	0/0:21,0:20:60.09:0,60,981	0/0:21,0:21:60.20:0,60,1052	1/1:0,25:27:66.23:1597,66,0	1/1:0,18:20:39.13:960,39,0	1/1:0,10:11:27.09:664,27,0	1/1:2,33:36:84.28:1929,84,0	1/1:0,25:25:75.26:1847,75,0	1/1:0,22:24:68.87:1545,69,0	1/1:0,23:23:69.24:1681,69,0	1/1:0,12:12:27.09:665,27,0	1/1:0,15:15:39.13:960,39,0	1/1:0,15:15:45.15:1108,45,0	1/1:0,17:17:48.16:1182,48,0	1/1:0,24:25:66.23:1623,66,0	0/0:12,0:12:33.11:0,33,604	1/1:1,10:12:33.11:777,33,0	0/0:18,0:18:54.18:0,54,949	0/0:36,0:36:99:0,108,1974	0/0:24,0:24:72.23:0,72,1286	1/1:0,17:18:51.18:1252,51,0	1/1:0,28:29:78.27:1898,78,0	1/1:0,10:10:18.06:443,18,0	1/1:0,17:17:48.16:1181,48,0	0/1:28,3:32:99:151,0,1347	0/0:37,0:36:99:0,111,1949	1/1:0,15:15:30.10:738,30,0
chr10	94212254	.	T	TG	63.88	PASS	AB=0.948;AC=8;AF=0.143;AN=56;BaseQRankSum=5.252;DP=698;FS=9.034;HRun=0;HaplotypeScore=172.0498;InbreedingCoeff=-0.0921;MQ=54.01;MQ0=4;MQRankSum=-0.299;QD=0.36;ReadPosRankSum=-2.334;VQSLOD=1.3854;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:11.20:0,11,62	0/0:16,0:16:17.78:0,18,99	0/0:39,0:30:59.26:0,59,1014	0/0:38,0:28:64.61:0,65,844	0/0:29,0:29:7.72:0,8,31	0/1:24,0:24:29.92:30,0,50	0/0:15,0:15:11.51:0,12,66	0/0:40,0:28:54.23:0,54,304	0/0:22,0:22:20.25:0,20,104	0/1:40,0:39:21.52:22,0,378	0/0:30,0:30:17.41:0,17,92	0/0:23,0:23:0.59:0,1,72	0/1:18,0:18:4.35:4,0,75	0/0:12,0:12:13.85:0,14,66	0/1:24,0:24:6.79:7,0,44	0/1:24,1:25:1.91:2,0,54	0/0:21,0:21:48.16:0,48,671	0/0:16,0:16:35.42:0,35,200	0/0:24,0:24:72.21:0,72,971	0/0:36,0:36:99:0,108,1492	0/0:24,0:24:72.21:0,72,968	0/0:23,0:23:7.23:0,7,39	0/0:30,0:30:4.90:0,5,47	0/1:24,0:24:12.62:13,0,33	0/1:11,0:11:7.44:18,0,7	0/0:32,0:32:93.30:0,93,1271	0/0:33,0:33:93.31:0,93,1300	0/1:4,6:10:6.57:90,0,7
chr10	94212255	.	T	TGTGTGTGTGTGTGTG	11342.83	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=9.003;DP=702;FS=5.110;HRun=0;HaplotypeScore=345.6572;InbreedingCoeff=0.0352;MQ=53.09;MQ0=4;MQRankSum=-10.367;QD=24.93;ReadPosRankSum=1.592;VQSLOD=2.4986;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:25.07:696,25,0	0/1:18,0:18:4.99:398,0,5	0/0:39,0:30:83.75:0,84,1832	0/0:36,0:27:71.04:0,71,1691	1/1:30,0:30:12.51:202,13,0	0/1:23,0:23:26.93:112,0,27	0/1:16,0:16:46.92:179,0,47	0/1:40,0:28:13.06:1285,0,13	1/1:22,0:22:5.06:609,5,0	1/1:38,0:37:35.15:1976,35,0	0/1:30,0:30:6.03:393,0,6	0/1:23,0:23:17.23:788,0,17	0/1:19,0:19:3.71:471,0,4	0/1:12,0:12:37.98:99,0,38	0/1:24,0:24:21.42:239,0,21	1/1:24,0:25:2.28:1074,2,0	0/0:21,0:21:54.18:0,54,1945	0/1:16,0:16:16.10:611,0,16	0/0:23,0:24:72.22:0,72,2691	0/0:36,0:36:99:0,108,3932	0/0:24,0:24:55.75:0,56,2324	0/1:24,0:24:9.01:162,0,9	0/1:30,0:30:9.62:280,0,10	0/1:24,0:24:29.18:174,0,29	0/1:11,0:11:7.51:49,0,8	0/0:32,0:32:96.30:0,96,3699	0/0:34,0:34:99:0,99,3445	1/1:4,5:10:24.08:1546,24,0
chr10	94212610	.	G	GT	4619.83	PASS	AB=0.913;AC=19;AF=0.339;AN=56;BaseQRankSum=9.555;DP=540;FS=0.000;HRun=8;HaplotypeScore=75.4181;InbreedingCoeff=0.9152;MQ=63.88;MQ0=0;MQRankSum=-0.811;QD=23.69;ReadPosRankSum=1.333;VQSLOD=5.4475;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:56.96:0,57,506	1/1:1,13:14:36.06:397,36,0	0/0:14,0:14:36:0,36,322	0/0:16,0:15:27.80:0,28,232	1/1:3,22:25:29.70:595,30,0	0/0:19,0:19:48.02:0,48,439	0/0:10,0:10:27.01:0,27,247	0/0:37,0:37:84.01:0,84,763	1/1:3,12:15:39.11:446,39,0	1/1:2,25:27:75.21:852,75,0	1/1:4,18:22:26.69:561,27,0	0/0:17,0:17:48.03:0,48,439	0/0:14,0:14:39.02:0,39,357	0/0:11,0:11:33.02:0,33,302	1/1:1,11:12:30.09:346,30,0	1/1:0,14:14:42.12:485,42,0	0/0:31,0:31:78.03:0,78,714	1/1:6,23:29:34.86:569,35,0	0/0:17,0:17:42.01:0,42,381	0/0:28,0:28:78.03:0,78,714	0/0:21,0:21:60.03:0,60,549	0/0:12,0:12:36.02:0,36,329	0/0:22,0:22:51.02:0,51,467	0/0:21,0:21:57.01:0,57,517	1/1:3,13:16:30.09:343,30,0	0/1:19,2:21:24.25:24,0,307	0/0:27,0:27:72.03:0,72,659	0/0:4,0:4:12.01:0,12,110
chr10	94214320	.	A	AT	5668.36	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=1.084;DP=350;FS=0.000;HRun=7;HaplotypeScore=49.0481;InbreedingCoeff=0.8900;MQ=63.51;MQ0=0;MQRankSum=1.793;QD=22.95;ReadPosRankSum=-0.218;VQSLOD=4.1122;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:63.19:761,63,0	1/1:2,0:2:2.97:20,3,0	0/0:6,0:5:11.74:0,12,100	0/0:5,0:5:11.56:0,12,103	1/1:28,0:28:65.44:457,65,0	1/1:4,14:17:36.11:435,36,0	1/1:2,7:9:21.06:254,21,0	1/1:8,26:34:78.22:926,78,0	1/1:9,0:9:26.60:175,27,0	1/1:14,0:14:32.27:197,32,0	1/1:14,0:14:35.60:239,36,0	1/1:2,9:11:27.08:326,27,0	1/1:1,4:5:9.03:109,9,0	1/1:1,5:6:15.05:181,15,0	1/1:11,0:11:26.78:194,27,0	1/1:8,0:8:20.77:139,21,0	0/0:20,0:20:54.08:0,54,521	1/1:11,0:11:29.67:215,30,0	0/0:18,0:18:42.06:0,42,406	0/0:17,0:17:45.07:0,45,435	0/0:6,0:6:15.02:0,15,145	1/1:1,1:2:3.01:36,3,0	1/1:0,4:4:9.03:109,9,0	1/1:0,2:2:6.02:72,6,0	1/1:16,0:16:41.47:284,41,0	0/0:16,0:16:48.08:0,48,463	0/0:15,0:15:36.05:0,36,348	1/1:2,19:21:45.14:539,45,0
chr10	94214323	.	T	TA	5197.32	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=12.267;DP=343;FS=2.005;HRun=0;HaplotypeScore=49.2642;InbreedingCoeff=0.6172;MQ=65.14;MQ0=0;MQRankSum=0.378;QD=21.57;ReadPosRankSum=2.588;VQSLOD=6.6093;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:16.50:166,17,0	1/1:0,2:2:5.93:62,6,0	0/0:7,0:6:14.93:0,15,192	0/0:6,0:6:14.25:0,14,164	1/1:0,28:28:80.93:1069,81,0	1/1:15,0:14:6.70:94,7,0	0/1:9,0:9:30.86:37,0,31	0/1:31,0:31:62.27:162,0,62	1/1:1,9:10:27.09:395,27,0	1/1:0,13:13:39.07:534,39,0	1/1:0,14:14:41.97:573,42,0	0/1:10,0:10:1.08:64,0,1	0/1:5,0:5:14.64:15,0,17	1/1:5,0:5:11.98:42,12,0	1/1:0,12:12:27.09:403,27,0	1/1:0,9:9:21.07:314,21,0	0/0:19,0:19:57.17:0,57,777	1/1:0,11:11:30.10:442,30,0	0/0:17,0:17:48.15:0,48,642	0/0:17,0:17:51.11:0,51,672	0/0:7,0:7:21.04:0,21,258	0/1:2,0:2:2.88:3,0,19	1/1:4,0:4:7.46:28,7,0	1/1:2,0:2:5.42:27,5,0	1/1:0,16:16:42.14:623,42,0	0/0:16,0:16:48.16:0,48,670	0/0:13,0:13:39.12:0,39,530	1/1:20,0:20:37.91:145,38,0
chr10	94214430	.	CGTGTGTGTGTGTGTGTGTGT	C	546.92	PASS	AB=1.000;AC=11;AF=0.220;AN=50;BaseQRankSum=3.143;DP=384;FS=5.801;HRun=0;HaplotypeScore=154.1113;InbreedingCoeff=0.5593;MQ=75.69;MQ0=20;MQRankSum=-2.544;QD=7.70;ReadPosRankSum=-0.662;VQSLOD=2.1918;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:19:0.83:0,1,120	0/0:7,0:7:12.03:0,12,481	./.	0/0:41,0:23:3.40:0,3,40	0/0:10,0:10:15.52:0,16,537	1/1:12,1:14:11.99:346,12,0	./.	0/0:23,0:22:6.01:0,6,73	0/0:15,0:15:15.03:0,15,595	0/0:11,0:12:18.05:0,18,695	0/0:1,0:4:3.01:0,3,131	1/1:8,2:10:3.01:159,3,0	1/1:4,3:7:3.01:125,3,0	0/1:12,0:12:0.01:0,0,0	0/0:8,0:9:9.03:0,9,359	0/0:9,0:9:18.06:0,18,585	0/0:15,0:22:5.38:0,5,54	0/0:17,0:16:16.77:0,17,527	0/0:8,0:7:9.03:0,9,294	0/0:8,0:9:8.04:0,8,164	0/0:17,0:15:21.03:0,21,823	./.	1/1:4,0:4:3:26,3,0	1/1:10,12:21:2.97:20,3,0	0/0:10,0:10:18.06:0,18,663	0/0:9,0:8:9.50:0,10,275	0/0:15,0:18:23.99:0,24,796	0/0:6,0:6:11.93:0,12,171
chr10	94214975	.	CT	C	4252.54	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.562;DP=423;FS=9.151;HRun=5;HaplotypeScore=54.3629;InbreedingCoeff=0.9893;MQ=71.57;MQ0=0;MQRankSum=-0.605;QD=29.95;ReadPosRankSum=1.278;VQSLOD=5.0365;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.14:0,54,704	1/1:1,17:18:51.15:578,51,0	0/0:6,0:6:18.06:0,18,232	0/0:5,0:5:12.04:0,12,157	1/1:1,27:28:72.20:816,72,0	0/0:17,0:17:48.16:0,48,654	0/0:13,0:13:39.13:0,39,534	0/0:26,0:26:69.22:0,69,922	1/1:0,7:7:21.06:238,21,0	1/1:3,18:21:54.15:612,54,0	1/1:2,16:18:45.13:510,45,0	0/0:20,0:20:60.20:0,60,818	0/0:11,0:11:33.08:0,33,419	0/0:12,0:12:36.12:0,36,493	1/1:0,10:10:30.09:340,30,0	1/1:2,11:13:33.09:374,33,0	0/0:21,0:21:60.20:0,60,820	1/1:2,13:15:36.10:408,36,0	0/0:18,0:18:48.15:0,48,639	0/0:24,0:24:69.23:0,69,934	0/0:8,0:8:24.08:0,24,328	0/0:7,0:7:21.06:0,21,271	0/0:11,0:11:33.11:0,33,449	0/0:6,0:6:15.05:0,15,204	1/1:0,12:12:33.09:374,33,0	0/0:22,0:22:63.21:0,63,862	0/0:25,0:25:75.25:0,75,1013	0/0:8,0:8:24.08:0,24,328
chr10	94215425	.	A	AT	10922.01	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-10.886;DP=524;FS=2.209;HRun=7;HaplotypeScore=48.5684;InbreedingCoeff=0.9960;MQ=71.33;MQ0=0;MQRankSum=-2.514;QD=29.05;ReadPosRankSum=1.251;VQSLOD=5.4343;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:48.15:573,48,0	1/1:1,8:9:24.07:290,24,0	0/0:13,0:13:36.04:0,36,340	0/0:8,0:7:17.92:0,18,159	1/1:4,25:29:63.19:758,63,0	1/1:2,15:17:39.12:471,39,0	1/1:2,16:18:42.13:507,42,0	1/1:7,24:31:72.16:840,72,0	1/1:2,20:22:48.15:580,48,0	1/1:1,30:31:90.28:1087,90,0	1/1:4,19:23:57.09:656,57,0	1/1:1,8:9:21.06:254,21,0	1/1:1,14:15:39.05:453,39,0	1/1:3,13:16:30.09:362,30,0	1/1:0,15:15:42.13:507,42,0	1/1:1,15:16:42.13:507,42,0	0/0:15,0:15:44.97:0,45,414	1/1:1,7:8:18.06:217,18,0	0/0:18,0:18:45.07:0,45,434	0/0:27,0:27:75.07:0,75,710	0/0:15,0:15:36.06:0,36,348	1/1:1,18:19:48.15:575,48,0	1/1:1,23:24:63.19:761,63,0	1/1:1,11:12:33.10:399,33,0	1/1:3,20:23:48.15:580,48,0	0/0:24,0:24:66.10:0,66,637	0/0:28,0:27:72.07:0,72,687	1/1:3,15:18:45.14:544,45,0
chr10	94215695	.	TAA	T	7134.34	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=8.335;DP=585;FS=0.000;HRun=12;HaplotypeScore=89.2858;InbreedingCoeff=0.9379;MQ=64.04;MQ0=0;MQRankSum=-2.781;QD=16.67;ReadPosRankSum=3.280;VQSLOD=4.0140;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,45:50:99:1190,117,0	1/1:1,4:5:6:61,6,0	0/0:13,0:13:23.33:0,23,215	0/0:13,0:13:1.48:0,1,190	1/1:4,28:33:74.82:744,75,0	1/1:2,0:16:35.67:154,36,0	1/1:1,0:15:35.42:151,35,0	1/1:4,20:24:62.80:594,63,0	1/1:6,11:17:20.99:214,21,0	1/1:6,21:27:63.07:628,63,0	1/1:6,11:17:27:275,27,0	1/1:2,0:17:30.17:130,30,0	1/1:3,0:20:38.36:166,38,0	1/1:0,0:13:35.68:154,36,0	1/1:3,23:26:54.10:549,54,0	1/1:1,16:18:42.08:427,42,0	1/1:4,18:23:41.80:479,42,0	1/1:2,14:16:23.77:243,24,0	0/0:12,0:16:28.55:0,29,324	0/0:23,0:26:56.21:0,56,736	0/0:31,0:33:83.25:0,83,1159	1/1:0,0:18:38.40:166,38,0	1/1:4,0:25:40.68:177,41,0	1/1:4,0:20:29.91:130,30,0	1/1:4,11:15:27.04:275,27,0	0/0:20,0:20:39.10:0,39,542	0/0:31,0:34:91.23:0,91,1195	1/1:4,7:13:23.75:225,24,0
chr10	94220757	.	CT	C	192.01	PASS	AB=0.851;AC=9;AF=0.161;AN=56;BaseQRankSum=0.760;DP=595;FS=4.677;HRun=15;HaplotypeScore=87.7602;InbreedingCoeff=-0.0750;MQ=66.91;MQ0=7;MQRankSum=0.468;QD=1.01;ReadPosRankSum=1.200;VQSLOD=-0.5526;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:39:54.71:0,55,317	0/0:7,0:7:20.99:0,21,181	0/0:35,1:22:8.53:0,9,85	0/1:34,1:20:9.92:29,0,10	0/0:26,1:29:36.22:0,36,392	0/0:8,0:19:11.78:0,12,57	0/0:19,0:19:8.52:0,9,42	0/1:15,7:22:5.56:88,0,6	0/1:14,2:16:2.57:3,0,220	0/0:28,1:28:2.28:0,2,250	0/0:21,1:22:26.64:0,27,330	0/0:12,0:11:1.96:0,2,49	0/0:12,0:12:20.27:0,20,110	0/0:13,0:13:14.20:0,14,70	0/0:19,0:20:30.56:0,31,231	0/1:11,0:11:6.82:7,0,67	0/1:23,2:25:12.85:13,0,281	0/0:12,0:12:19.37:0,19,145	0/0:16,1:21:19.49:0,19,269	0/1:29,5:35:40.18:40,0,304	0/1:12,3:15:8.55:9,0,175	0/0:19,0:19:18.64:0,19,88	0/0:24,0:24:20.10:0,20,109	0/0:6,0:14:5.67:0,6,30	0/1:11,1:12:7.24:7,0,146	0/0:32,1:33:20.09:0,20,375	0/0:20,0:19:37.71:0,38,338	0/1:5,11:16:3.76:124,0,4
chr10	94222377	.	CT	C	4972.36	PASS	AB=0.700;AC=37;AF=0.661;AN=56;BaseQRankSum=12.127;DP=469;FS=1.276;HRun=11;HaplotypeScore=70.0689;InbreedingCoeff=0.7195;MQ=77.78;MQ0=1;MQRankSum=-1.876;QD=15.74;ReadPosRankSum=1.221;VQSLOD=5.6718;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:51.13:0,51,544	1/1:0,7:7:20.98:172,21,0	0/0:13,1:13:0.43:0,0,75	0/1:16,1:12:19.68:20,0,23	1/1:2,22:24:59.90:493,60,0	1/1:4,14:18:38.95:320,39,0	0/1:2,7:10:5.99:152,0,6	1/1:4,0:25:41.18:121,41,0	0/1:4,8:12:5.04:170,0,5	1/1:3,20:23:27.95:432,28,0	1/1:2,27:30:70.88:567,71,0	1/1:2,8:10:17.97:148,18,0	1/1:3,22:25:56.92:468,57,0	1/1:0,12:12:32.96:271,33,0	1/1:1,18:19:50.94:419,51,0	1/1:1,8:9:23.97:197,24,0	0/0:18,1:21:35.13:0,35,529	1/1:1,5:6:11.98:98,12,0	0/0:20,1:21:35.44:0,35,562	0/0:27,0:27:66.12:0,66,671	0/0:7,0:7:21.05:0,21,224	1/1:1,7:8:20.97:172,21,0	1/1:2,10:12:5.06:197,5,0	1/1:0,3:3:8.99:74,9,0	1/1:3,14:17:38.95:320,39,0	0/0:21,1:21:32.50:0,32,551	0/0:19,1:21:29.33:0,29,502	1/1:1,0:28:56.25:162,56,0
chr10	94222604	.	ATG	A	901.86	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=9.720;DP=536;FS=46.318;HRun=0;HaplotypeScore=106.0222;InbreedingCoeff=0.1122;MQ=72.15;MQ0=4;MQRankSum=0.505;QD=3.27;ReadPosRankSum=6.524;VQSLOD=-0.2719;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:60.09:60,0,93	1/1:7,0:7:10.69:35,11,0	0/1:22,0:11:8.07:8,0,97	0/1:19,0:16:12.38:12,0,134	0/1:28,0:28:9.32:9,0,157	0/0:36,0:36:99:0,99,1461	0/0:15,0:15:44.95:0,45,631	0/0:34,0:34:2.01:0,2,276	0/1:15,0:15:16.24:16,0,42	0/1:29,0:29:5.83:6,0,179	0/1:25,0:24:49.15:58,0,49	0/0:15,0:15:41.92:0,42,636	0/0:13,0:13:35.93:0,36,462	0/0:7,0:7:15.05:0,15,245	0/1:13,0:12:3.24:3,0,79	0/1:16,0:16:17.48:17,0,19	1/1:2,26:28:51:734,51,0	0/1:11,0:10:3.14:3,0,41	0/0:23,0:23:66:0,66,758	0/0:17,0:18:51.09:0,51,646	0/0:14,0:14:27.05:0,27,337	0/0:7,0:7:18.01:0,18,208	0/0:14,0:14:39:0,39,470	0/0:14,0:14:33.58:0,34,469	0/1:11,0:11:11.94:13,0,12	0/0:23,0:23:65.30:0,65,868	0/0:27,0:27:65.98:0,66,759	1/1:17,0:17:21.29:93,21,0
chr10	94222605	.	TG	T	374.33	PASS	AB=0.933;AC=5;AF=0.089;AN=56;BaseQRankSum=0.987;DP=537;FS=2.266;HRun=1;HaplotypeScore=99.2261;InbreedingCoeff=0.3984;MQ=72.34;MQ0=4;MQRankSum=0.312;QD=4.86;ReadPosRankSum=-0.731;VQSLOD=0.1475;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,1:35:75.13:0,75,476	0/0:7,0:7:16.12:0,16,80	0/1:21,0:11:3.50:3,0,108	0/0:20,0:17:11.08:0,11,157	0/0:27,0:27:63.97:0,64,393	0/0:36,0:36:96.54:0,97,1053	0/0:15,0:15:39.54:0,40,451	0/0:34,0:34:95.06:0,95,625	0/0:15,0:15:37.38:0,37,217	0/0:29,0:29:77.78:0,78,528	0/0:26,0:25:58:0,58,348	0/0:15,0:15:29.72:0,30,450	0/0:12,0:12:34.80:0,35,348	0/0:6,0:6:14.93:0,15,178	0/1:11,2:12:25.22:25,0,144	0/0:17,0:17:44.43:0,44,236	1/1:26,2:28:50.98:453,51,0	0/0:11,0:10:22.07:0,22,121	0/0:24,0:24:45.74:0,46,489	0/0:18,0:18:50.15:0,50,448	0/0:15,0:15:26.87:0,27,240	0/0:6,0:6:17.99:0,18,166	0/0:14,0:14:38.97:0,39,375	0/1:13,1:14:2.40:2,0,299	0/0:10,0:10:25.99:0,26,152	0/0:24,0:24:50.56:0,51,595	0/0:27,0:27:63.49:0,63,559	0/0:17,0:17:38.86:0,39,201
chr10	94222606	.	GTT	G	4572.39	PASS	AB=0.777;AC=26;AF=0.464;AN=56;BaseQRankSum=2.285;DP=549;FS=1.189;HRun=14;HaplotypeScore=94.5718;InbreedingCoeff=0.8346;MQ=72.69;MQ0=4;MQRankSum=0.927;QD=15.93;ReadPosRankSum=5.994;VQSLOD=4.1604;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,27:35:27.08:644,27,0	1/1:0,7:7:18.02:167,18,0	0/0:25,0:12:8.87:0,9,122	0/1:20,0:18:33.31:33,0,54	0/1:5,18:26:0.53:350,0,1	0/0:31,0:36:92.24:0,92,1160	0/0:13,0:15:38.10:0,38,478	1/1:13,19:33:56.58:507,57,0	1/1:3,12:15:29.99:278,30,0	1/1:7,20:29:53.56:531,54,0	1/1:3,21:25:59.49:523,59,0	0/0:14,0:15:41.58:0,42,531	0/0:11,0:12:26.63:0,27,324	0/0:7,0:8:24:0,24,267	1/1:5,7:11:1.57:120,2,0	1/1:0,13:17:38.13:360,38,0	1/1:28,0:28:35.87:300,36,0	1/1:3,8:10:9.91:131,10,0	0/0:8,0:24:64.93:0,65,621	0/0:7,0:19:48.07:0,48,524	0/0:5,0:16:21.05:0,21,241	0/0:5,0:6:9.02:0,9,113	0/0:12,0:14:21.06:0,21,281	0/0:12,0:14:31.64:0,32,377	1/1:0,9:9:24.03:222,24,0	0/0:8,1:26:44.33:0,44,700	0/0:16,0:31:53.96:0,54,557	1/1:1,16:18:28:405,28,0
chr10	94223843	.	TAA	T	1796.74	PASS	AB=0.597;AC=18;AF=0.321;AN=56;BaseQRankSum=4.343;DP=291;FS=8.472;HRun=12;HaplotypeScore=48.8364;InbreedingCoeff=0.7676;MQ=53.52;MQ0=12;MQRankSum=2.119;QD=18.72;ReadPosRankSum=1.098;VQSLOD=1.8362;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:56.64:0,57,789	0/0:0,0:3:4.99:0,5,18	0/0:9,0:8:24.06:0,24,307	0/0:2,0:1:3.01:0,3,36	0/0:2,0:11:17.97:0,18,77	0/1:2,5:7:7.46:135,0,7	1/1:1,7:8:21.04:214,21,0	1/1:6,15:20:14.10:340,14,0	0/0:6,0:11:14.97:0,15,53	0/0:1,0:8:17.47:0,17,61	0/0:3,0:9:17.82:0,18,72	0/1:4,7:10:6.87:190,0,7	1/1:0,4:4:12.03:122,12,0	1/1:0,6:6:18.04:183,18,0	0/0:3,0:5:9.98:0,10,35	0/0:4,0:5:4.99:0,5,18	0/0:1,0:13:36.04:0,36,342	0/0:1,0:15:29.94:0,30,105	0/0:14,0:13:36.10:0,36,478	0/0:10,0:9:24.04:0,24,327	0/0:23,0:23:57.15:0,57,825	1/1:5,5:9:15:153,15,0	1/1:1,8:9:17.80:235,18,0	1/1:3,9:12:21.02:213,21,0	0/0:2,0:9:15.44:0,15,53	0/0:12,0:12:30.08:0,30,410	0/0:4,0:4:12.01:0,12,156	1/1:0,7:7:21.05:214,21,0
chr10	94223980	.	T	TTGTGTG	515.01	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=2.543;DP=448;FS=0.000;HRun=0;HaplotypeScore=119.4062;InbreedingCoeff=0.4020;MQ=68.62;MQ0=16;MQRankSum=-3.005;QD=5.48;ReadPosRankSum=-1.826;VQSLOD=2.0736;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,26:33:24.08:585,24,0	0/0:4,0:4:9.03:0,9,195	0/0:31,0:18:35.04:0,35,512	0/0:35,0:19:7.84:0,8,263	0/0:6,0:6:9.03:0,9,170	0/0:13,0:12:18.92:0,19,398	0/0:16,0:16:36.08:0,36,693	0/1:24,0:22:15.67:16,0,102	0/0:18,0:16:38.87:0,39,681	0/0:9,0:9:18.06:0,18,391	0/0:3,0:3:9.02:0,9,155	0/0:23,0:23:54.14:0,54,1061	0/0:7,0:6:15.05:0,15,293	0/0:10,0:10:24.08:0,24,467	0/0:14,0:12:27.09:0,27,459	0/0:9,0:9:18.06:0,18,317	0/1:29,0:29:26.36:26,0,847	0/0:18,0:17:39.12:0,39,788	0/0:19,0:17:21.05:0,21,349	0/0:6,0:6:9.03:0,9,170	0/0:53,0:52:84.46:0,84,1886	0/1:3,0:3:0:0,0,0	0/0:6,0:6:3.01:0,3,46	0/0:18,0:16:36.02:0,36,739	0/0:5,0:5:12:0,12,189	0/0:21,0:20:35.62:0,36,714	0/0:8,0:8:21.07:0,21,390	1/1:5,0:4:0.47:1,0,0
chr10	94224013	.	CGTGTGTGT	C	679.38	PASS	AB=1.000;AC=17;AF=0.447;AN=38;BaseQRankSum=-0.042;DP=484;FS=4.291;HRun=0;HaplotypeScore=120.4717;InbreedingCoeff=0.4342;MQ=43.04;MQ0=66;MQRankSum=0.310;QD=4.59;ReadPosRankSum=0.008;VQSLOD=2.0284;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:26:2.67:0,3,37	./.	./.	./.	./.	1/1:12,3:11:5.67:111,6,0	0/0:12,0:8:0:0,0,0	0/0:29,0:26:0.89:0,1,2	0/1:19,0:17:10.60:81,0,11	0/0:12,0:9:2.98:0,3,22	./.	1/1:23,1:21:17.26:254,17,0	1/1:7,4:9:3.01:69,3,0	1/1:9,1:9:9.03:140,9,0	1/1:10,0:11:2.92:17,3,0	1/1:8,0:7:3.01:53,3,0	0/0:33,0:31:7.50:0,7,624	1/1:18,0:14:2.80:15,3,0	0/0:15,0:13:3.01:0,3,38	./.	0/0:58,0:51:19.29:0,19,435	0/0:4,0:2:3.01:0,3,86	./.	1/1:22,7:21:2.38:67,2,0	./.	0/0:21,0:17:18.86:0,19,294	0/0:6,0:4:5.99:0,6,58	./.
chr10	94224639	.	G	GCACACACACACACACA	2789.35	PASS	AB=1.000;AC=34;AF=0.680;AN=50;BaseQRankSum=-0.767;DP=380;FS=14.807;HRun=0;HaplotypeScore=153.3777;InbreedingCoeff=0.5799;MQ=49.58;MQ0=9;MQRankSum=-2.513;QD=14.38;ReadPosRankSum=0.581;VQSLOD=1.8372;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:5.99:68,6,0	1/1:0,0:4:2.96:19,3,0	0/0:23,0:10:3.01:0,3,58	0/0:29,0:10:14.97:0,15,145	1/1:12,0:13:6.02:96,6,0	0/1:12,0:12:0:0,0,0	1/1:13,0:12:2.94:18,3,0	1/1:13,0:12:12.80:324,13,0	1/1:0,0:5:3.01:169,3,0	1/1:6,0:6:9:200,9,0	./.	1/1:6,0:6:3:25,3,0	1/1:12,0:12:5.97:91,6,0	1/1:8,2:9:8.86:469,9,0	1/1:9,0:9:5.99:50,6,0	1/1:6,0:7:6.49:286,6,0	0/1:15,0:15:99:118,0,484	1/1:12,0:13:32.94:703,33,0	0/0:13,0:11:11.99:0,12,398	0/0:13,0:14:17.79:0,18,346	0/0:37,0:38:60.10:0,60,2023	./.	1/1:10,0:10:9:163,9,0	1/1:20,0:20:5.79:119,6,0	./.	0/0:16,0:22:33.11:0,33,1070	0/0:6,0:9:17.92:0,18,389	1/1:7,0:6:5.92:39,6,0
chr10	94224683	.	C	CT	840.24	PASS	AB=0.786;AC=20;AF=0.357;AN=56;BaseQRankSum=-1.449;DP=385;FS=2.967;HRun=13;HaplotypeScore=75.5922;InbreedingCoeff=0.4199;MQ=67.71;MQ0=5;MQRankSum=-3.544;QD=5.83;ReadPosRankSum=-3.168;VQSLOD=1.9302;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:30.49:0,30,209	0/0:7,0:7:14.88:0,15,103	1/1:22,1:13:6.03:40,6,0	0/0:16,0:10:10.88:0,11,59	0/0:10,0:13:20.06:0,20,135	1/1:6,5:12:19.22:156,19,0	1/1:3,7:11:8.08:105,8,0	0/0:4,0:18:29.19:0,29,96	0/0:13,0:13:29.70:0,30,202	0/0:7,0:8:19.87:0,20,129	0/0:9,0:9:8.84:0,9,58	0/1:7,5:12:25.26:63,0,25	1/1:5,1:7:3:28,3,0	1/1:3,5:8:12.01:111,12,0	0/1:11,1:13:5.46:5,0,106	0/1:5,2:8:33.02:34,0,33	0/0:23,0:24:55.50:0,56,372	0/0:15,1:17:4.86:0,5,178	0/1:12,3:15:37.45:37,0,61	0/1:4,2:6:19.20:19,0,24	0/0:36,0:43:62.52:0,63,380	1/1:1,4:5:10.73:88,11,0	0/1:4,3:7:8.10:72,0,8	1/1:6,9:16:29.87:265,30,0	0/0:17,0:18:14.50:0,15,139	0/0:12,0:12:4.48:0,4,125	0/0:15,0:13:34.69:0,35,229	0/0:3,0:5:4.38:0,4,14
chr10	94225165	.	CAT	C	1250.36	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=2.414;DP=267;FS=5.563;HRun=0;HaplotypeScore=47.9176;InbreedingCoeff=0.4528;MQ=70.92;MQ0=1;MQRankSum=-1.556;QD=19.85;ReadPosRankSum=-2.799;VQSLOD=2.1580;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:45.15:0,45,753	0/0:2,0:4:6:0,6,52	0/0:15,0:9:3.31:0,3,52	0/1:13,0:6:15.57:23,0,16	0/1:4,0:8:1:1,0,36	0/0:12,0:12:33.11:0,33,562	0/0:5,0:5:12.04:0,12,201	1/1:11,23:34:93.28:1195,93,0	0/0:7,0:11:11.03:0,11,84	0/0:5,0:10:15.29:0,15,110	0/0:8,0:10:8.95:0,9,67	0/0:8,0:8:18.06:0,18,300	0/0:5,0:5:12.02:0,12,178	0/0:6,0:6:9.03:0,9,154	0/0:2,0:4:4.55:0,5,30	0/0:1,0:3:6:0,6,52	0/0:21,0:21:60.21:0,60,1023	0/0:5,0:11:23.26:0,23,184	0/0:17,0:17:39.12:0,39,640	0/0:3,0:3:9.03:0,9,150	0/0:6,0:6:18.06:0,18,299	0/0:3,0:3:9.03:0,9,150	0/0:7,0:7:18.06:0,18,309	0/0:5,0:5:9.03:0,9,141	0/0:2,0:5:9:0,9,77	0/0:8,0:8:18.06:0,18,309	0/0:6,0:6:15.05:0,15,256	1/1:0,7:7:12.04:156,12,0
chr10	94225187	.	CAT	C	1091.49	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=5.379;DP=242;FS=0.000;HRun=0;HaplotypeScore=45.7160;InbreedingCoeff=0.7739;MQ=71.99;MQ0=3;MQRankSum=-2.262;QD=18.50;ReadPosRankSum=0.198;VQSLOD=3.3805;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:24.05:0,24,363	1/1:1,2:3:9.03:113,9,0	0/0:11,0:4:3.48:0,3,34	0/0:20,0:8:7.97:0,8,65	1/1:3,4:6:6.02:75,6,0	0/0:13,0:13:30.09:0,30,474	0/0:4,0:4:9.03:0,9,150	0/0:18,0:38:79.62:0,80,695	1/1:2,5:7:12.04:151,12,0	1/1:2,5:7:15.05:188,15,0	1/1:2,5:7:12.04:151,12,0	0/0:8,0:8:18.06:0,18,296	0/0:5,0:5:15.05:0,15,246	0/0:4,0:4:9.03:0,9,150	1/1:1,5:6:9.03:113,9,0	1/1:0,4:4:9.03:113,9,0	0/0:21,0:21:60.21:0,60,997	1/1:4,6:10:15.05:189,15,0	0/0:16,1:17:10.30:0,10,708	0/0:1,0:1:3.01:0,3,50	0/0:6,0:6:15.05:0,15,249	0/0:1,0:1:3.01:0,3,50	0/0:5,0:5:12.04:0,12,199	0/0:1,0:1:3.01:0,3,50	1/1:0,8:8:15.05:188,15,0	0/0:9,0:9:10.22:0,10,266	0/0:6,0:6:15.05:0,15,249	0/0:1,0:4:9:0,9,79
chr10	94225496	.	C	CT	7819.23	PASS	AB=0.857;AC=39;AF=0.722;AN=54;BaseQRankSum=-0.829;DP=460;FS=15.717;HRun=9;HaplotypeScore=65.3299;InbreedingCoeff=0.8667;MQ=72.12;MQ0=2;MQRankSum=0.326;QD=22.28;ReadPosRankSum=2.602;VQSLOD=4.2512;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,32:36:72.15:780,72,0	1/1:1,5:6:12.03:133,12,0	0/0:12,0:12:26.73:0,27,219	0/0:16,0:15:29.84:0,30,260	1/1:4,18:23:57.31:584,57,0	1/1:3,14:17:13.07:372,13,0	1/1:5,12:17:29.63:295,30,0	./.	1/1:3,11:14:30.08:332,30,0	1/1:5,14:19:34.74:404,35,0	1/1:5,11:16:35.43:338,35,0	1/1:6,14:19:30.08:332,30,0	1/1:5,18:23:57.05:600,57,0	1/1:2,12:14:30.08:332,30,0	1/1:1,17:18:45.12:498,45,0	1/1:1,9:10:18.02:187,18,0	1/1:3,24:27:63.17:697,63,0	1/1:2,15:17:45.12:498,45,0	0/0:16,0:16:38.98:0,39,338	0/0:17,0:16:38.02:0,38,318	0/0:17,0:17:41.97:0,42,365	1/1:1,6:7:8.70:100,9,0	1/1:5,12:17:16.12:383,16,0	1/1:2,16:18:42.11:465,42,0	1/1:1,19:20:39.11:431,39,0	0/1:10,2:12:59.88:60,0,175	0/0:28,0:28:56.95:0,57,491	0/0:3,0:3:6.66:0,7,21
chr10	94226416	.	TATAATAATAATAATAATA	T	7566.67	PASS	AC=18;AF=0.360;AN=50;BaseQRankSum=7.686;DP=277;FS=5.346;HRun=0;HaplotypeScore=141.2181;InbreedingCoeff=0.8012;MQ=65.43;MQ0=0;MQRankSum=-7.373;QD=64.12;ReadPosRankSum=1.296;VQSLOD=4.0843;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:12.04:0,12,626	1/1:0,4:4:9.03:439,9,0	./.	0/0:10,0:9:3.01:0,3,32	1/1:9,12:21:24.01:923,24,0	0/0:13,0:13:27.09:0,27,1933	0/0:7,0:7:12.04:0,12,600	0/0:21,0:28:42.14:0,42,1960	1/1:3,6:10:18.06:832,18,0	1/1:6,10:16:30.07:1081,30,0	1/1:6,12:18:30.10:1380,30,0	0/0:5,0:5:9.03:0,9,765	0/0:3,0:7:6.02:0,6,472	0/0:6,0:6:6.02:0,6,371	1/1:1,3:3:6.02:291,6,0	1/1:6,7:13:18.06:881,18,0	0/0:13,0:19:27.37:0,27,1230	1/1:9,7:16:12.04:577,12,0	0/0:7,0:13:24.07:0,24,1417	0/0:8,0:8:3.01:0,3,227	0/0:1,0:5:12.04:0,12,897	./.	0/0:4,0:4:3.01:0,3,255	./.	1/1:6,10:16:24.08:1162,24,0	0/0:4,0:5:6.02:0,6,380	0/0:5,0:12:15.05:0,15,1060	0/0:1,0:6:15.05:0,15,880
chr10	94226773	.	G	GAAA	5135.34	PASS	AB=0.664;AC=34;AF=0.654;AN=52;BaseQRankSum=-1.617;DP=474;FS=0.476;HRun=10;HaplotypeScore=97.1064;InbreedingCoeff=0.6246;MQ=70.21;MQ0=8;MQRankSum=-2.802;QD=16.51;ReadPosRankSum=-1.493;VQSLOD=2.4954;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:46:99:0,105,638	1/1:1,8:9:15.05:288,15,0	0/0:19,0:14:7.80:0,8,223	0/0:15,0:11:9.46:0,9,129	1/1:5,12:20:33.01:491,33,0	1/1:2,0:14:9.97:23,10,0	1/1:2,0:19:12.88:68,13,0	./.	1/1:7,8:15:16.30:277,16,0	1/1:5,15:22:41.06:607,41,0	1/1:5,15:21:48.03:735,48,0	1/1:3,0:13:3.18:25,3,0	1/1:2,0:7:7.48:17,7,0	1/1:4,0:10:6.23:15,6,0	1/1:3,17:20:30.10:577,30,0	1/1:6,6:11:26.58:470,27,0	1/1:10,0:31:35.86:274,36,0	1/1:4,10:15:27.07:485,27,0	0/0:21,0:21:51.09:0,51,604	0/0:11,0:11:18.83:0,19,197	0/1:9,0:8:1.90:2,0,164	0/1:2,0:14:11.78:12,0,19	0/1:2,0:13:21.77:28,0,22	0/1:4,0:15:9.77:10,0,55	1/1:7,20:28:43.36:731,43,0	0/0:19,0:18:41.99:0,42,489	0/0:30,0:31:74.66:0,75,899	./.
chr10	94226813	.	T	TAAG	1310.87	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.062;DP=524;FS=0.794;HRun=0;HaplotypeScore=99.3492;InbreedingCoeff=0.9368;MQ=93.01;MQ0=0;MQRankSum=-6.835;QD=42.29;ReadPosRankSum=-3.804;VQSLOD=3.9153;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,114,1830	0/0:9,0:9:24.08:0,24,392	0/0:25,0:25:66.22:0,66,1054	0/0:25,0:24:57.38:0,57,895	0/0:24,0:24:69.24:0,69,1125	0/0:11,0:11:24.08:0,24,392	0/0:15,0:15:36.12:0,36,585	1/1:11,18:29:60.20:1289,60,0	0/0:11,0:11:30.10:0,30,489	0/0:20,0:20:60.20:0,60,978	0/0:18,0:18:54.18:0,54,880	0/0:11,0:11:24.07:0,24,368	0/0:14,0:14:42.14:0,42,686	0/0:11,0:11:24.07:0,24,368	0/0:20,0:20:48.11:0,48,784	0/0:18,0:18:54.18:0,54,882	0/0:21,0:21:57.19:0,57,931	0/0:18,0:18:44.93:0,45,701	0/0:25,0:25:69.18:0,69,1026	0/0:15,0:15:42.14:0,42,686	0/0:7,0:7:21.07:0,21,341	0/0:17,0:17:48.16:0,48,784	0/0:18,0:18:42.14:0,42,686	0/0:12,0:12:36.10:0,36,562	0/0:35,0:35:83.97:0,84,1323	0/0:18,0:18:51.17:0,51,833	0/0:33,0:33:87.30:0,87,1391	1/1:0,2:2:6.02:134,6,0
chr10	94227009	.	AG	A	942.68	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.732;DP=593;FS=0.650;HRun=6;HaplotypeScore=74.7542;InbreedingCoeff=0.9335;MQ=79.09;MQ0=1;MQRankSum=-1.860;QD=26.19;ReadPosRankSum=-2.572;VQSLOD=2.7307;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1284	0/0:3,0:3:6.02:0,6,79	0/0:26,0:26:53.05:0,53,629	0/0:24,0:22:12.30:0,12,376	0/0:37,0:37:96.30:0,96,1246	0/0:23,0:23:60.18:0,60,775	0/0:18,0:18:51.14:0,51,643	1/1:3,25:28:75.19:806,75,0	0/0:23,0:23:57.16:0,57,720	0/0:30,0:30:87.28:0,87,1129	0/0:27,0:27:78.25:0,78,1008	0/0:17,0:17:48.16:0,48,632	0/0:16,0:16:48.16:0,48,630	0/0:11,0:11:30.10:0,30,395	0/0:26,0:26:72.23:0,72,946	0/0:21,0:21:63.19:0,63,814	0/0:21,0:21:60.18:0,60,771	0/0:15,0:15:42.14:0,42,551	0/0:18,0:18:51.14:0,51,651	0/0:16,0:16:39.13:0,39,513	0/0:20,0:20:60.19:0,60,783	0/0:24,0:24:69.22:0,69,902	0/0:13,0:13:33.09:0,33,419	0/0:19,0:19:54.13:0,54,690	0/0:22,0:22:60.20:0,60,789	0/0:26,0:26:72.23:0,72,934	0/0:27,0:27:81.26:0,81,1065	1/1:0,8:8:24.06:258,24,0
chr10	94227412	.	A	AGG	5298.75	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-3.380;DP=579;FS=0.754;HRun=8;HaplotypeScore=81.5294;InbreedingCoeff=0.9813;MQ=85.40;MQ0=0;MQRankSum=-2.789;QD=22.74;ReadPosRankSum=2.384;VQSLOD=3.8299;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.17:0,69,769	1/1:2,6:8:12.04:175,12,0	0/0:24,0:24:62.93:0,63,670	0/0:22,0:22:51.03:0,51,522	1/1:7,21:31:59.47:845,59,0	0/0:20,0:20:48.11:0,48,535	0/0:24,0:24:66.14:0,66,717	1/1:23,0:23:6.66:135,7,0	1/1:4,12:16:27.09:428,27,0	1/1:6,11:18:32.60:482,33,0	1/1:6,16:23:36.12:571,36,0	0/0:22,0:22:63.13:0,63,680	0/0:15,0:15:39.10:0,39,435	0/0:22,0:22:57.14:0,57,635	1/1:4,12:17:35.59:509,36,0	1/1:5,14:19:36.12:571,36,0	1/1:3,0:35:69.87:240,70,0	1/1:0,13:13:39.13:616,39,0	0/0:18,0:18:48.12:0,48,527	0/0:27,0:27:67.02:0,67,728	0/0:16,0:17:36.02:0,36,460	0/0:20,0:20:57.15:0,57,635	0/0:26,0:26:66.15:0,66,735	0/0:17,0:17:45.11:0,45,502	1/1:2,18:22:38.62:579,39,0	0/0:25,0:26:71.92:0,72,774	0/0:20,0:20:57.15:0,57,635	1/1:8,0:8:17.96:148,18,0
chr10	94227414	.	G	GTGGT	1031.27	PASS	AB=0.778;AC=3;AF=0.054;AN=56;BaseQRankSum=6.072;DP=579;FS=5.308;HRun=0;HaplotypeScore=121.1002;InbreedingCoeff=0.6142;MQ=86.63;MQ0=0;MQRankSum=-7.826;QD=35.56;ReadPosRankSum=-1.800;VQSLOD=3.3441;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.22:0,78,1510	0/0:8,0:8:7.21:0,7,66	0/0:26,0:26:78.22:0,78,1436	0/0:22,0:22:63.19:0,63,1134	0/0:30,0:30:66.91:0,67,504	0/0:20,0:20:57.16:0,57,1080	0/0:24,0:24:72.25:0,72,1484	0/1:15,6:21:16.25:718,0,16	0/0:15,0:15:32.42:0,32,229	0/0:20,0:20:45.68:0,46,391	0/0:22,0:22:49.77:0,50,389	0/0:22,0:22:63.22:0,63,1296	0/0:16,0:16:45.15:0,45,911	0/0:22,0:22:66.21:0,66,1297	0/0:18,0:18:44.84:0,45,382	0/0:18,0:18:38.71:0,39,283	0/0:36,0:36:93.23:0,93,1156	0/0:14,0:14:34.44:0,34,237	0/0:18,0:18:51.16:0,51,1031	0/0:27,0:27:78.13:0,78,1526	0/0:18,0:18:54.15:0,54,1016	0/0:20,0:20:60.21:0,60,1247	0/0:27,0:27:78.22:0,78,1470	0/0:17,0:17:51.15:0,51,1018	0/0:20,0:20:38.80:0,39,303	0/0:24,0:24:72.25:0,72,1479	0/0:20,0:20:60.20:0,60,1211	1/1:2,6:8:18.06:417,18,0
chr10	94227418	.	G	GGGA	1311.41	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=13.633;DP=567;FS=9.069;HRun=0;HaplotypeScore=105.4177;InbreedingCoeff=0.5087;MQ=85.83;MQ0=0;MQRankSum=-4.441;QD=6.90;ReadPosRankSum=2.945;VQSLOD=1.6745;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.23:0,75,1150	0/1:8,0:8:12.76:25,0,13	0/0:26,0:26:78.20:0,78,1100	0/0:20,0:20:56.72:0,57,793	0/1:29,0:29:8.16:122,0,8	0/0:19,0:19:57.16:0,57,847	0/0:23,0:23:66.21:0,66,1032	1/1:15,6:24:57.73:738,58,0	0/1:16,0:16:23.44:23,0,73	0/1:16,0:16:38.78:43,0,39	1/1:19,0:19:9.50:62,9,0	0/0:22,0:22:63.20:0,63,974	0/0:17,0:17:45.13:0,45,675	0/0:21,0:21:60.20:0,60,938	0/1:17,0:17:21.50:22,0,91	1/1:19,0:19:1.65:45,2,0	0/0:34,0:34:72.75:0,73,273	1/1:14,0:14:2.94:51,3,0	0/0:17,0:17:51.16:0,51,774	0/0:28,0:28:75.18:0,75,1125	0/0:19,0:19:53.63:0,54,755	0/0:19,0:19:57.19:0,57,913	0/0:26,0:26:78.03:0,78,1134	0/0:16,0:16:45.15:0,45,721	1/1:20,0:20:18.59:67,19,0	0/0:24,0:24:72.23:0,72,1129	0/0:20,0:20:60.19:0,60,927	1/1:2,6:8:18.06:295,18,0
chr10	94228147	.	A	ATT	1453.90	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.934;DP=605;FS=5.257;HRun=8;HaplotypeScore=81.8493;InbreedingCoeff=0.9524;MQ=68.54;MQ0=0;MQRankSum=-0.442;QD=30.29;ReadPosRankSum=-2.897;VQSLOD=3.2638;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.16:0,63,702	0/0:10,0:11:26.79:0,27,270	0/0:8,0:8:12.02:0,12,127	0/0:7,0:7:8.57:0,9,91	0/0:22,0:22:51.09:0,51,568	0/0:21,0:21:60.16:0,60,669	0/0:13,0:13:33.09:0,33,368	1/1:11,16:28:51.15:763,51,0	0/0:28,0:28:75.16:0,75,826	0/0:33,0:33:84.19:0,84,929	0/0:21,0:22:45.03:0,45,560	0/0:19,0:19:45.11:0,45,502	0/0:24,0:24:63.12:0,63,693	0/0:26,0:27:68.90:0,69,747	0/0:25,0:25:69.17:0,69,769	0/0:20,0:21:62.91:0,63,681	0/0:29,0:29:72.16:0,72,794	0/0:14,0:14:39.10:0,39,433	0/0:21,0:21:57.15:0,57,635	0/0:35,0:34:90.22:0,90,1003	0/0:13,0:13:33.08:0,33,367	0/0:21,0:21:45.10:0,45,502	0/0:16,0:16:48.13:0,48,535	0/0:20,0:20:48.13:0,48,535	0/0:23,0:23:57.14:0,57,635	0/0:20,0:20:54.12:0,54,602	0/0:40,0:40:99:0,108,1183	1/1:5,14:20:53.67:812,54,0
chr10	94228226	.	G	GAA	4263.17	PASS	AB=0.847;AC=19;AF=0.339;AN=56;BaseQRankSum=-7.806;DP=545;FS=7.922;HRun=10;HaplotypeScore=102.1776;InbreedingCoeff=0.7956;MQ=80.74;MQ0=0;MQRankSum=-1.419;QD=21.21;ReadPosRankSum=-0.305;VQSLOD=3.6730;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:59.92:0,60,584	0/0:12,0:12:33.07:0,33,336	0/0:18,0:19:13.33:0,13,166	0/1:10,0:11:20.42:20,0,50	0/0:23,0:24:47.67:0,48,518	1/1:1,23:26:66.21:951,66,0	1/1:2,14:17:12.89:444,13,0	0/0:6,0:31:62.13:0,62,265	0/0:19,0:19:42.42:0,42,453	0/0:18,0:18:24.70:0,25,373	0/0:23,0:24:50.77:0,51,499	1/1:1,13:14:24.08:358,24,0	1/1:3,21:25:47.65:680,48,0	1/1:5,10:15:39.55:539,40,0	0/0:11,0:11:33.06:0,33,328	0/0:12,0:12:33.07:0,33,336	0/1:3,0:20:6.34:83,0,6	0/0:14,0:14:33.03:0,33,335	0/1:15,0:15:1.64:2,0,236	0/0:31,0:31:48.03:0,48,614	0/0:20,0:20:51.10:0,51,518	1/1:2,19:22:47.95:592,48,0	1/1:3,18:23:31.23:388,31,0	1/1:1,10:13:15.04:208,15,0	0/0:11,0:12:20.72:0,21,264	0/0:24,0:24:56.61:0,57,542	0/0:40,0:38:99:0,105,1043	0/0:0,0:7:19.21:0,19,83
chr10	94228601	.	T	TA	1717.39	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.110;DP=473;FS=9.011;HRun=2;HaplotypeScore=50.6194;InbreedingCoeff=0.9088;MQ=81.37;MQ0=0;MQRankSum=-0.193;QD=34.35;ReadPosRankSum=-3.010;VQSLOD=1.8985;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.28:0,87,1185	0/0:6,0:6:18.05:0,18,236	0/0:18,0:16:3.36:0,3,347	0/0:18,0:17:35.15:0,35,339	0/0:21,0:21:63.20:0,63,863	0/0:19,0:19:57.18:0,57,776	0/0:17,0:17:51.14:0,51,664	1/1:0,37:37:99:1411,108,0	0/0:6,0:6:18.05:0,18,235	0/0:22,0:22:63.67:0,64,851	0/0:30,0:30:90.29:0,90,1239	0/0:12,0:12:36.11:0,36,486	0/0:11,0:11:33.10:0,33,445	0/0:18,0:18:54.18:0,54,752	0/0:19,0:19:55.41:0,55,724	0/0:14,0:14:42.13:0,42,557	0/0:11,0:11:33.08:0,33,411	0/0:11,0:11:27.09:0,27,362	0/0:16,0:16:47.92:0,48,583	0/0:20,0:20:60.18:0,60,805	0/0:13,0:13:39.13:0,39,543	0/0:17,0:17:51.16:0,51,681	0/0:13,0:13:36.11:0,36,475	0/0:6,0:6:18.05:0,18,236	0/0:16,0:16:48.15:0,48,647	0/0:19,0:19:57.16:0,57,748	0/0:21,0:21:55.98:0,56,776	1/1:0,13:13:30.10:427,30,0
chr10	94228682	.	TCA	T	1432.16	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.628;DP=524;FS=9.253;HRun=0;HaplotypeScore=63.0118;InbreedingCoeff=0.9872;MQ=61.98;MQ0=0;MQRankSum=1.596;QD=36.72;ReadPosRankSum=-3.427;VQSLOD=4.2505;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,2513	0/0:7,0:7:18.06:0,18,330	0/0:14,0:14:42.14:0,42,775	0/0:18,0:16:42.14:0,42,741	0/0:24,0:24:72.21:0,72,1267	0/0:18,0:18:54.17:0,54,980	0/0:15,0:15:45.15:0,45,828	1/1:2,32:34:93.29:1330,93,0	0/0:13,0:13:39.12:0,39,699	0/0:18,0:18:54.19:0,54,1007	0/0:20,0:20:60.17:0,60,1080	0/0:15,0:15:45.15:0,45,826	0/0:17,0:17:48.15:0,48,868	0/0:14,0:14:42.14:0,42,786	0/0:17,0:17:45.14:0,45,812	0/0:13,0:13:39.13:0,39,730	0/0:27,0:27:78.27:0,78,1460	0/0:16,0:16:45.04:0,45,734	0/0:16,0:15:42.13:0,42,755	0/0:10,0:10:30.10:0,30,543	0/0:31,0:31:87.30:0,87,1628	0/0:14,0:14:39.13:0,39,730	0/0:20,0:20:60.21:0,60,1114	0/0:21,0:21:63.22:0,63,1180	0/0:23,0:23:69.22:0,69,1260	0/0:18,0:18:54.18:0,54,982	0/0:20,0:20:57.20:0,57,1059	1/1:0,5:5:15.05:221,15,0
chr10	94229036	.	AT	A	1087.80	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.216;DP=526;FS=7.112;HRun=1;HaplotypeScore=76.4250;InbreedingCoeff=0.9933;MQ=73.41;MQ0=0;MQRankSum=-1.859;QD=31.99;ReadPosRankSum=-2.697;VQSLOD=2.1433;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.21:0,63,1007	0/0:12,0:12:36.12:0,36,571	0/0:7,0:7:21.07:0,21,307	0/0:12,0:12:33.11:0,33,526	0/0:30,0:30:90.24:0,90,1342	0/0:22,0:21:66.23:0,66,1052	0/0:15,0:15:45.14:0,45,692	1/1:1,25:26:75.24:974,75,0	0/0:23,0:23:63.21:0,63,996	0/0:27,0:27:81.28:0,81,1299	0/0:20,0:20:60.19:0,60,930	0/0:16,0:16:48.16:0,48,763	0/0:19,0:19:57.18:0,57,888	0/0:17,0:17:51.17:0,51,815	0/0:15,0:15:42.14:0,42,671	0/0:17,0:17:48.15:0,48,740	0/0:14,0:14:42.14:0,42,671	0/0:24,0:24:63.19:0,63,973	0/0:21,0:21:63.20:0,63,983	0/0:18,0:18:54.18:0,54,859	0/0:13,0:13:39.13:0,39,620	0/0:18,0:18:54.18:0,54,863	0/0:29,0:29:87.28:0,87,1365	0/0:11,0:11:33.11:0,33,525	0/0:17,0:17:48.16:0,48,762	0/0:31,0:31:90.26:0,90,1391	0/0:23,0:23:69.23:0,69,1086	1/1:0,8:8:18.06:234,18,0
chr10	94229084	.	T	TTA	9551.43	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=17.292;DP=556;FS=6.091;HRun=0;HaplotypeScore=88.9355;InbreedingCoeff=0.9997;MQ=80.69;MQ0=0;MQRankSum=-3.729;QD=55.53;ReadPosRankSum=2.047;VQSLOD=5.0634;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.18:0,63,1000	1/1:0,19:19:51.18:1034,51,0	0/0:22,0:21:63.21:0,63,1010	0/0:16,0:16:45.15:0,45,725	1/1:0,27:27:78.27:1561,78,0	0/0:28,0:28:78.27:0,78,1273	0/0:17,0:17:51.14:0,51,783	0/0:30,0:30:87.28:0,87,1375	1/1:0,22:24:63.22:1278,63,0	1/1:0,32:34:99:1934,99,0	1/1:0,14:14:42.10:785,42,0	0/0:15,0:15:45.15:0,45,734	0/0:25,0:25:75.22:0,75,1173	0/0:16,0:16:48.16:0,48,783	1/1:0,16:17:48.16:973,48,0	1/1:0,12:13:36.12:708,36,0	0/0:20,0:20:60.20:0,60,979	1/1:0,14:14:36.12:730,36,0	0/0:29,0:29:81.26:0,81,1272	0/0:19,0:19:57.17:0,57,903	0/0:14,0:14:42.13:0,42,660	0/0:27,0:27:81.28:0,81,1321	0/0:11,0:11:33.10:0,33,509	0/0:12,0:12:36.08:0,36,558	1/1:0,9:10:27.09:548,27,0	0/0:29,0:29:87.29:0,87,1392	0/0:22,0:22:66.21:0,66,1051	0/0:11,0:11:33.11:0,33,538
chr10	94230876	.	AG	A	949.01	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.103;DP=622;FS=3.440;HRun=4;HaplotypeScore=60.7567;InbreedingCoeff=0.9915;MQ=78.26;MQ0=0;MQRankSum=-2.532;QD=27.11;ReadPosRankSum=-2.549;VQSLOD=1.8375;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.23:0,81,1130	0/0:6,0:6:18.06:0,18,251	0/0:16,0:16:44.47:0,44,523	0/0:14,0:14:32.02:0,32,345	0/0:27,0:27:78.25:0,78,1074	0/0:22,0:22:66.22:0,66,923	0/0:23,0:23:63.20:0,63,862	1/1:2,24:26:72.21:853,72,0	0/0:24,0:24:72.24:0,72,1007	0/0:16,0:16:39.10:0,39,537	0/0:24,0:24:72.24:0,72,1007	0/0:21,0:21:63.21:0,63,882	0/0:28,0:28:84.27:0,84,1155	0/0:17,0:17:48.15:0,48,651	0/0:31,0:31:90.29:0,90,1242	0/0:23,0:23:66.19:0,66,889	0/0:29,0:29:87.27:0,87,1185	0/0:19,0:19:54.18:0,54,755	0/0:25,0:25:72.22:0,72,989	0/0:19,0:19:57.19:0,57,797	0/0:25,0:25:72.23:0,72,990	0/0:21,0:21:63.21:0,63,881	0/0:15,0:15:45.09:0,45,586	0/0:17,0:17:48.16:0,48,671	0/0:22,0:22:66.22:0,66,924	0/0:40,0:40:99:0,108,1511	0/0:34,0:34:99:0,102,1409	1/1:1,8:9:18.06:216,18,0
chr10	94231130	.	A	AG	4145.85	PASS	AB=0.933;AC=23;AF=0.411;AN=56;BaseQRankSum=-8.762;DP=527;FS=8.351;HRun=4;HaplotypeScore=63.9311;InbreedingCoeff=0.8608;MQ=79.34;MQ0=3;MQRankSum=-1.588;QD=27.46;ReadPosRankSum=0.325;VQSLOD=2.7579;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.20:0,78,866	1/1:2,4:6:3.01:41,3,0	0/0:23,0:15:34.05:0,34,298	0/0:37,1:27:1.06:0,1,311	1/1:2,14:16:42.14:574,42,0	0/0:17,0:17:51.15:0,51,578	0/0:27,0:27:72.21:0,72,817	1/1:3,9:12:25.25:288,25,0	1/1:1,15:16:42.14:574,42,0	1/1:1,11:12:33.09:428,33,0	1/1:1,11:12:27.09:369,27,0	0/0:23,0:23:69.20:0,69,780	0/0:14,0:14:39.11:0,39,442	0/0:18,0:18:54.15:0,54,612	1/1:3,13:16:33.11:451,33,0	1/1:3,15:18:39.13:532,39,0	0/0:23,0:23:64.06:0,64,716	1/1:2,9:11:24.05:309,24,0	0/0:19,0:19:45.12:0,45,509	0/0:18,0:18:51.14:0,51,578	0/0:36,0:36:99:0,102,1145	0/0:23,0:23:66.19:0,66,748	0/0:16,0:16:45.10:0,45,498	0/0:25,0:24:63.18:0,63,712	1/1:1,14:15:39.13:533,39,0	0/1:13,1:14:4.95:5,0,336	0/0:26,0:26:69.19:0,69,782	1/1:1,2:3:3.01:41,3,0
chr10	94231403	.	C	CTTT	804.66	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=1.364;DP=569;FS=0.000;HRun=10;HaplotypeScore=95.4626;InbreedingCoeff=0.8388;MQ=81.48;MQ0=0;MQRankSum=-2.811;QD=13.41;ReadPosRankSum=-4.282;VQSLOD=0.2144;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.10:0,81,936	0/0:7,0:7:18.02:0,18,204	0/0:16,0:17:10.08:0,10,271	0/1:16,0:17:0.61:1,0,135	0/0:17,0:18:36:0,36,437	0/0:26,0:27:66.08:0,66,783	0/0:17,0:17:38.11:0,38,437	1/1:10,13:26:42.01:653,42,0	0/0:30,0:33:79.49:0,79,963	0/0:13,0:14:29.98:0,30,346	0/0:17,0:17:39.05:0,39,448	0/0:36,0:36:84.02:0,84,971	0/0:24,0:24:69.19:0,69,826	0/0:18,0:18:45.03:0,45,532	0/0:22,0:22:57.11:0,57,680	0/0:14,0:17:41.91:0,42,454	0/0:36,0:36:99:0,105,1273	0/0:11,0:11:30.08:0,30,365	0/0:17,0:17:26.99:0,27,328	0/0:21,0:22:47.94:0,48,553	0/0:17,0:17:39.52:0,40,456	0/0:18,0:18:42.05:0,42,505	0/0:9,0:9:21.03:0,21,255	0/0:26,0:26:69.17:0,69,839	0/0:17,0:17:35.95:0,36,407	0/0:18,0:18:36.04:0,36,437	0/0:21,0:21:54.12:0,54,643	1/1:4,10:17:15.05:270,15,0
chr10	94231557	.	CT	C	864.90	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.443;DP=532;FS=1.552;HRun=4;HaplotypeScore=66.2805;InbreedingCoeff=0.9659;MQ=93.31;MQ0=0;MQRankSum=-1.485;QD=29.82;ReadPosRankSum=-2.534;VQSLOD=2.6395;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1660	0/0:7,0:7:21.07:0,21,294	0/0:21,0:21:53.53:0,54,695	0/0:26,0:26:69.03:0,69,867	0/0:18,0:18:48.09:0,48,616	0/0:24,0:23:66.21:0,66,905	0/0:17,0:17:48.10:0,48,632	1/1:0,25:25:75.18:872,75,0	0/0:20,0:20:57.19:0,57,798	0/0:22,0:22:66.22:0,66,924	0/0:17,0:17:51.15:0,51,682	0/0:19,0:19:48.15:0,48,654	0/0:15,0:15:42.11:0,42,541	0/0:13,0:13:39.09:0,39,510	0/0:14,0:14:33.10:0,33,445	0/0:19,0:19:57.17:0,57,763	0/0:17,0:17:45.15:0,45,630	0/0:9,0:9:24.02:0,24,297	0/0:27,0:27:81.25:0,81,1097	0/0:18,0:18:48.16:0,48,668	0/0:30,0:30:87.25:0,87,1181	0/0:19,0:19:57.17:0,57,766	0/0:19,0:19:57.19:0,57,797	0/0:17,0:16:45.05:0,45,569	0/0:23,0:23:69.23:0,69,963	0/0:17,0:17:51.16:0,51,686	0/0:14,0:14:42.14:0,42,581	1/1:0,4:4:9.03:107,9,0
chr10	94231638	.	ACC	A	331.53	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=5.897;DP=513;FS=8.391;HRun=2;HaplotypeScore=81.7381;InbreedingCoeff=0.5866;MQ=71.56;MQ0=10;MQRankSum=3.325;QD=16.58;ReadPosRankSum=-2.060;VQSLOD=-0.1343;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:80.86:0,81,830	0/0:5,0:5:15:0,15,213	0/0:34,0:15:44.97:0,45,416	0/0:34,0:24:71.69:0,72,644	0/0:12,0:12:35.95:0,36,335	0/0:25,0:24:50.90:0,51,421	0/0:21,0:20:44.74:0,45,376	1/1:0,15:15:44.94:377,45,0	0/0:15,0:15:34.22:0,34,421	0/0:23,0:23:65.43:0,65,617	0/0:6,0:6:5.98:0,6,49	0/0:14,0:14:32.94:0,33,336	0/0:16,0:16:35.78:0,36,339	0/0:17,0:15:25.93:0,26,258	0/0:17,0:16:32.44:0,32,520	0/0:27,0:27:74.45:0,74,946	0/0:16,0:15:25.55:0,26,188	0/0:18,0:18:50.46:0,50,518	0/0:15,0:15:44.90:0,45,370	0/0:12,0:12:25.63:0,26,265	0/0:30,0:29:60.64:0,61,731	0/0:12,0:12:18:0,18,204	0/0:8,0:8:8.87:0,9,106	0/0:30,0:30:50.45:0,50,492	0/0:12,0:12:35.99:0,36,390	0/0:21,0:21:46.69:0,47,543	0/0:16,0:16:38.95:0,39,509	0/1:5,0:5:13.19:60,0,13
chr10	94232181	.	TTCTC	T	1348.44	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.981;DP=639;FS=16.578;HRun=0;HaplotypeScore=114.3233;InbreedingCoeff=0.9906;MQ=78.28;MQ0=2;MQRankSum=-5.425;QD=36.44;ReadPosRankSum=-3.243;VQSLOD=2.1632;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:90.31:0,90,2339	0/0:5,0:5:15.05:0,15,380	0/0:40,0:32:75.23:0,75,1356	0/0:46,0:38:39.81:0,40,1381	0/0:20,0:20:48.10:0,48,1165	0/0:20,0:20:51.11:0,51,1205	0/0:21,0:21:54.17:0,54,1339	1/1:4,24:28:72.02:1035,72,0	0/0:22,0:22:45.15:0,45,1167	0/0:22,0:22:57.16:0,57,1337	0/0:21,0:21:54.19:0,54,1378	0/0:17,0:17:42.13:0,42,1006	0/0:25,0:25:66.11:0,66,1517	0/0:20,0:20:54.14:0,54,1331	0/0:30,0:29:63.22:0,63,1606	0/0:21,0:21:51.18:0,51,1312	0/0:18,0:18:48.14:0,48,1196	0/0:23,0:23:51.17:0,51,1276	0/0:21,0:21:36.59:0,37,824	0/0:28,0:28:78.25:0,78,1970	0/0:28,0:28:63:0,63,1534	0/0:25,0:25:66.23:0,66,1678	0/0:19,0:19:48.14:0,48,1191	0/0:13,0:13:36.11:0,36,883	0/0:21,0:21:51.18:0,51,1335	0/0:21,0:21:57.15:0,57,1358	0/0:19,0:19:48.15:0,48,1199	1/1:1,8:9:24.08:435,24,0
chr10	94232259	.	GTCTCTGTC	G	8383.34	PASS	AB=0.966;AC=19;AF=0.339;AN=56;BaseQRankSum=13.357;DP=693;FS=21.556;HRun=0;HaplotypeScore=202.2133;InbreedingCoeff=0.9003;MQ=65.93;MQ0=5;MQRankSum=-12.780;QD=34.79;ReadPosRankSum=0.354;VQSLOD=3.1271;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:75.21:0,75,2710	1/1:0,7:7:11.94:153,12,0	0/0:42,0:30:47.18:0,47,1021	0/0:47,0:36:38.08:0,38,1076	1/1:4,22:26:44.98:837,45,0	0/0:18,0:18:39.10:0,39,1373	0/0:19,0:19:45.15:0,45,1721	0/0:39,0:36:50.87:0,51,597	1/1:2,25:27:48.16:1226,48,0	1/1:4,30:34:84.09:1895,84,0	1/1:6,17:23:41.97:701,42,0	0/0:25,0:25:69.24:0,69,2647	0/0:22,0:22:57.16:0,57,2082	0/0:19,0:19:48.12:0,48,1679	1/1:1,27:28:54.19:1322,54,0	1/1:4,25:29:54.18:1361,54,0	0/0:22,0:21:46.69:0,47,2006	1/1:8,8:16:17.57:230,18,0	0/0:17,0:17:45.14:0,45,1543	0/0:30,0:30:81.14:0,81,2901	0/0:31,0:31:72.20:0,72,2543	0/0:19,0:19:48.03:0,48,1899	0/0:17,0:17:39.12:0,39,1314	0/0:31,0:30:78.27:0,78,3051	1/1:4,19:23:30.06:652,30,0	0/1:27,1:28:7.26:7,0,2283	0/0:18,0:18:42.14:0,42,1716	0/0:4,0:4:3.01:0,3,57
chr10	94232265	.	G	GTC	874.54	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=5.788;DP=690;FS=17.067;HRun=0;HaplotypeScore=159.4706;InbreedingCoeff=0.7232;MQ=64.75;MQ0=5;MQRankSum=-4.494;QD=14.34;ReadPosRankSum=-4.232;VQSLOD=1.1468;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:81.21:0,81,1028	1/1:7,0:7:0.89:2,1,0	0/0:48,0:34:68.89:0,69,820	0/0:53,0:39:44.74:0,45,671	0/0:24,0:24:32.52:0,33,236	0/0:19,0:19:39.13:0,39,518	0/0:17,0:17:48.16:0,48,638	1/1:17,18:32:57.18:930,57,0	0/0:26,0:27:37.29:0,37,181	0/0:31,0:31:70.99:0,71,367	0/0:20,0:21:12.35:0,12,85	0/0:23,0:23:69.23:0,69,917	0/0:23,0:23:66.17:0,66,831	0/0:17,0:17:48.15:0,48,625	0/0:27,0:27:47.88:0,48,307	0/0:27,0:27:48.83:0,49,256	0/0:23,0:22:61.01:0,61,761	0/1:15,0:15:2.76:3,0,46	0/0:17,0:17:48.15:0,48,625	0/0:28,0:28:81.27:0,81,1074	0/0:29,0:29:78.22:0,78,1003	0/0:23,0:23:57.16:0,57,724	0/0:18,0:18:42.14:0,42,555	0/0:32,0:31:81.25:0,81,1058	0/0:22,0:22:22.24:0,22,173	0/0:28,0:28:75.07:0,75,955	0/0:17,0:17:48.13:0,48,618	1/1:3,1:4:3.01:52,3,0
chr10	94232288	.	TGCCTTA	T	456.30	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=3.999;DP=645;FS=0.000;HRun=0;HaplotypeScore=209.3986;InbreedingCoeff=0.6763;MQ=64.27;MQ0=1;MQRankSum=-3.247;QD=18.25;ReadPosRankSum=-0.764;VQSLOD=3.0805;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:92.80:0,93,2947	0/0:10,0:10:21.07:0,21,659	0/0:41,0:30:70.01:0,70,1996	0/0:53,0:37:41.26:0,41,1736	0/0:26,0:26:12.07:0,12,204	0/0:12,0:12:36.12:0,36,1208	0/0:19,0:19:54.17:0,54,1795	1/1:1,10:9:24.04:506,24,0	0/0:25,0:25:61.45:0,61,1297	0/0:27,0:27:51.57:0,52,1505	0/0:22,0:22:40.07:0,40,798	0/0:22,0:22:63.22:0,63,2307	0/0:20,0:20:60.21:0,60,2177	0/0:14,0:14:42.14:0,42,1423	0/0:29,0:29:52.44:0,52,901	0/0:29,0:29:61.68:0,62,1402	0/0:23,0:23:40.34:0,40,1956	0/1:13,0:13:24.44:24,0,605	0/0:19,0:19:57.11:0,57,1635	0/0:23,0:23:66.23:0,66,2288	0/0:26,0:26:72.17:0,72,2279	0/0:25,0:25:75.26:0,75,2671	0/0:19,0:19:57.18:0,57,1907	0/0:32,0:31:87.67:0,88,3077	0/0:26,0:26:43.02:0,43,977	0/0:25,0:25:75.23:0,75,2515	0/0:17,0:17:51.18:0,51,1819	1/1:0,1:1:3.01:44,3,0
chr10	94232333	.	GTC	G	64.67	PASS	AB=0.951;AC=7;AF=0.140;AN=50;BaseQRankSum=-0.814;DP=679;FS=12.022;HRun=0;HaplotypeScore=158.2423;InbreedingCoeff=-0.0370;MQ=46.89;MQ0=28;MQRankSum=1.772;QD=0.47;ReadPosRankSum=0.686;VQSLOD=2.2520;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:36:1.51:2,0,154	0/0:15,0:15:2.99:0,3,23	./.	./.	0/0:24,0:24:2.98:0,3,22	0/0:21,0:20:3:0,3,25	0/1:21,0:21:49.10:55,0,49	./.	0/0:23,0:23:5.99:0,6,56	0/0:33,0:32:22.26:0,22,171	0/0:28,0:28:2.98:0,3,22	0/1:23,3:25:15.51:16,0,141	0/1:23,3:25:72.15:72,0,74	0/0:22,0:22:23.88:0,24,275	0/0:25,0:25:11.95:0,12,99	0/0:27,0:27:21.33:0,21,154	0/0:35,0:34:19.15:0,19,149	0/0:11,0:11:3.87:0,4,24	0/0:19,0:18:3.32:0,3,40	0/0:17,0:17:2.80:0,3,6	0/0:26,0:24:5.99:0,6,49	0/1:25,0:25:8.08:8,0,38	0/0:23,0:23:9.01:0,9,108	0/0:34,0:33:15.65:0,16,377	0/0:28,0:28:2.98:0,3,22	0/0:29,0:29:16.13:0,16,104	0/0:20,0:20:5.62:0,6,61	1/1:1,1:1:2.98:22,3,0
chr10	94232339	.	C	CTG	1666.01	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=12.821;DP=698;FS=5.047;HRun=0;HaplotypeScore=146.4820;InbreedingCoeff=0.8766;MQ=43.82;MQ0=33;MQRankSum=-6.485;QD=8.01;ReadPosRankSum=-0.481;VQSLOD=3.2889;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:37:69.29:0,69,553	1/1:12,2:15:21.64:151,22,0	0/0:26,0:3:5.96:0,6,45	0/0:33,0:3:6.46:0,6,66	1/1:20,1:22:9:101,9,0	0/0:23,0:22:41.94:0,42,346	0/0:23,0:23:53.93:0,54,468	./.	1/1:18,3:21:24.02:158,24,0	1/1:24,6:29:37.97:467,38,0	1/1:23,4:28:8.26:47,8,0	0/0:27,0:26:62.80:0,63,544	0/0:29,0:28:53.90:0,54,500	0/0:22,0:22:56.87:0,57,543	1/1:17,6:25:0.16:152,0,0	1/1:15,10:28:32.30:475,32,0	0/0:39,0:37:80.10:0,80,570	1/1:7,2:9:20.69:169,21,0	0/0:19,0:18:40.15:0,40,370	0/0:17,0:17:17.79:0,18,143	0/0:28,0:25:32.94:0,33,272	0/0:32,0:31:50.93:0,51,439	0/0:23,0:23:44.96:0,45,401	0/0:40,0:38:94.44:0,94,880	1/1:20,4:27:21.22:141,21,0	0/0:30,0:28:80.24:0,80,642	0/0:21,0:21:21.81:0,22,315	1/1:3,0:2:0.47:1,0,0
chr10	94233278	.	TA	T	375.47	PASS	AB=0.833;AC=3;AF=0.054;AN=56;BaseQRankSum=2.967;DP=489;FS=6.701;HRun=9;HaplotypeScore=61.0149;InbreedingCoeff=0.5954;MQ=68.45;MQ0=0;MQRankSum=-1.739;QD=15.02;ReadPosRankSum=0.363;VQSLOD=3.5382;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:33.08:0,33,369	0/1:4,1:5:12.42:12,0,123	0/0:8,0:8:12.03:0,12,134	0/0:6,0:6:9.91:0,10,106	0/0:26,0:26:78.23:0,78,900	0/0:23,1:24:29.72:0,30,596	0/0:5,0:5:9.03:0,9,104	0/0:29,0:29:66.20:0,66,762	0/0:19,0:19:48.14:0,48,554	0/0:26,0:26:66.20:0,66,762	0/0:20,1:21:32.74:0,33,630	0/0:11,0:11:24.06:0,24,267	0/0:10,0:10:30.07:0,30,334	0/0:9,0:9:27.08:0,27,307	0/0:13,0:13:33.10:0,33,381	0/0:14,0:14:42.12:0,42,485	1/1:2,18:20:50.86:467,51,0	0/0:24,0:24:60.18:0,60,692	0/0:22,1:23:32.69:0,33,618	0/0:30,1:31:47.71:0,48,788	0/0:12,0:12:30.09:0,30,346	0/0:14,0:14:36.10:0,36,407	0/0:15,0:15:19.15:0,19,427	0/0:13,0:13:36.11:0,36,415	0/0:18,0:18:48.14:0,48,554	0/0:31,1:32:62.77:0,63,959	0/0:28,0:28:66.14:0,66,738	0/0:18,0:19:41.94:0,42,454
chr10	94233326	.	GAA	G	4852.49	PASS	AB=0.696;AC=25;AF=0.446;AN=56;BaseQRankSum=-6.333;DP=536;FS=11.613;HRun=12;HaplotypeScore=89.1691;InbreedingCoeff=0.7819;MQ=75.06;MQ0=1;MQRankSum=-2.978;QD=18.88;ReadPosRankSum=2.778;VQSLOD=2.9220;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:10:14.97:0,15,53	1/1:1,2:3:6.01:61,6,0	0/0:14,0:10:9.67:0,10,54	0/1:14,0:12:18.34:18,0,106	1/1:8,24:34:65.81:720,66,0	0/0:3,0:19:40.95:0,41,196	0/1:0,1:11:2.55:3,0,60	1/1:6,24:31:71.82:704,72,0	1/1:2,20:22:57.10:580,57,0	1/1:4,14:20:41.76:401,42,0	1/1:7,12:20:35.76:410,36,0	0/1:3,1:10:9.53:10,0,59	0/0:4,0:16:27.45:0,27,97	0/0:1,0:13:27.32:0,27,96	1/1:2,18:20:48.08:488,48,0	1/1:1,13:14:36.08:366,36,0	0/0:22,0:24:62.14:0,62,821	1/1:7,15:22:39.06:397,39,0	0/0:9,0:23:53.58:0,54,551	0/0:7,0:31:80.97:0,81,747	0/0:5,0:16:30.04:0,30,313	0/0:4,0:11:17.98:0,18,97	0/0:7,0:17:30.96:0,31,158	0/0:2,0:17:34.26:0,34,120	1/1:3,17:21:41.81:408,42,0	0/0:11,0:35:87.11:0,87,886	0/0:6,0:33:69.05:0,69,661	1/1:2,11:15:8.55:287,9,0
chr10	94234531	.	ATG	A	219.99	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.205;DP=580;FS=13.403;HRun=0;HaplotypeScore=97.3672;InbreedingCoeff=0.9941;MQ=85.39;MQ0=0;MQRankSum=-4.474;QD=31.43;ReadPosRankSum=-0.886;VQSLOD=4.9692;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:21.07:312,21,0	0/0:10,0:10:30.10:0,30,578	0/0:18,0:18:54.16:0,54,890	0/0:20,0:20:57.19:0,57,1050	0/0:36,0:36:99:0,108,2088	0/0:19,0:19:57.18:0,57,1086	0/0:21,0:21:63.22:0,63,1226	0/0:28,0:28:84.29:0,84,1636	0/0:20,0:20:60.21:0,60,1156	0/0:24,0:24:72.24:0,72,1379	0/0:19,0:19:57.18:0,57,1075	0/0:15,0:15:45.15:0,45,884	0/0:22,0:22:66.23:0,66,1285	0/0:23,0:23:69.24:0,69,1343	0/0:21,0:21:63.22:0,63,1223	0/0:19,0:19:57.20:0,57,1101	0/0:18,0:18:54.19:0,54,1039	0/0:18,0:18:51.17:0,51,999	0/0:15,0:15:42.14:0,42,820	0/0:40,0:40:99:0,120,2306	0/0:11,0:11:33.11:0,33,647	0/0:22,0:22:66.23:0,66,1278	0/0:33,0:33:99:0,99,1863	0/0:14,0:14:42.14:0,42,824	0/0:14,0:14:42.14:0,42,816	0/0:29,0:29:87.30:0,87,1686	0/0:35,0:35:99:0,105,2049	0/0:9,0:9:27.09:0,27,517
chr10	94235314	.	A	AACTG	1145.36	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-5.972;DP=555;FS=0.000;HRun=0;HaplotypeScore=88.0701;InbreedingCoeff=0.7296;MQ=78.43;MQ0=0;MQRankSum=-3.720;QD=42.42;ReadPosRankSum=-2.047;VQSLOD=3.2453;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,172,3541	0/0:4,0:4:12.04:0,12,252	0/0:26,0:24:69.14:0,69,1154	0/0:23,0:23:66.14:0,66,1260	0/0:23,0:23:66.23:0,66,1383	0/0:16,0:16:48.16:0,48,1003	0/0:27,0:27:78.25:0,78,1596	1/1:0,14:18:42.13:1079,42,0	0/0:15,0:15:45.14:0,45,904	0/0:15,0:15:45.13:0,45,836	0/0:12,0:12:36.11:0,36,693	0/0:18,0:18:54.17:0,54,1091	0/0:24,0:24:72.25:0,72,1509	0/0:18,0:18:54.17:0,54,1094	0/0:20,0:20:60.18:0,60,1205	0/0:23,0:23:69.21:0,69,1345	0/0:29,0:28:87.28:0,87,1783	0/0:19,0:19:54.19:0,54,1132	0/0:23,0:23:66.23:0,66,1370	0/0:12,0:12:36.11:0,36,705	0/0:43,0:43:99:0,129,2548	0/0:13,0:13:36:0,36,617	0/0:12,0:12:36.11:0,36,717	0/0:25,0:25:75.22:0,75,1479	0/1:7,0:7:10.78:11,0,330	0/0:17,0:17:51.18:0,51,1057	0/0:14,0:14:42.14:0,42,881	1/1:0,2:2:6.02:174,6,0
chr10	94235974	.	TA	T	4988.50	PASS	AB=0.843;AC=53;AF=0.946;AN=56;BaseQRankSum=-0.049;DP=519;FS=12.222;HRun=13;HaplotypeScore=80.7269;InbreedingCoeff=0.3790;MQ=76.15;MQ0=3;MQRankSum=-2.079;QD=9.61;ReadPosRankSum=4.199;VQSLOD=2.8769;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,20:28:60.72:427,61,0	1/1:1,0:11:18.33:53,18,0	0/1:20,1:18:2.75:3,0,79	0/1:14,0:8:0.58:1,0,13	1/1:4,0:16:24.43:71,24,0	1/1:2,12:14:32.81:241,33,0	1/1:4,9:14:28.84:203,29,0	1/1:9,0:29:40.55:119,41,0	1/1:0,0:23:38.70:112,39,0	1/1:4,0:24:32.53:94,33,0	1/1:3,0:21:34.61:100,35,0	1/1:1,8:11:27.94:187,28,0	1/1:3,11:14:26.70:197,27,0	1/1:6,13:20:32.70:243,33,0	1/1:1,0:17:28.51:82,29,0	1/1:4,0:21:30.53:88,31,0	1/1:3,16:19:44.74:328,45,0	1/1:0,0:16:30.56:88,31,0	1/1:5,10:17:10.64:217,11,0	0/1:6,17:22:7.66:278,0,8	1/1:0,9:10:28.88:203,29,0	1/1:7,17:24:41.69:306,42,0	1/1:6,12:19:31.84:225,32,0	1/1:4,13:18:11.91:240,12,0	1/1:0,1:21:37.61:122,38,0	1/1:2,16:20:51.25:357,51,0	1/1:3,16:21:48.80:340,49,0	1/1:1,0:12:22.41:66,22,0
chr10	94236002	.	TC	T	1238.14	PASS	AB=0.938;AC=5;AF=0.089;AN=56;BaseQRankSum=3.694;DP=523;FS=10.259;HRun=4;HaplotypeScore=88.1486;InbreedingCoeff=0.7960;MQ=84.03;MQ0=1;MQRankSum=-4.934;QD=21.35;ReadPosRankSum=-2.203;VQSLOD=1.8591;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:60.20:0,60,839	0/0:14,0:14:36.12:0,36,504	0/0:21,0:20:48.07:0,48,623	0/1:14,1:14:9.76:10,0,258	0/0:14,0:14:42.14:0,42,588	0/0:17,0:17:45.15:0,45,630	0/0:12,0:12:33.11:0,33,461	1/1:4,25:29:72.21:853,72,0	0/0:21,0:21:51.17:0,51,712	0/0:30,0:30:87.28:0,87,1204	0/0:20,0:20:60.20:0,60,839	0/0:15,0:15:45.15:0,45,622	0/0:10,0:10:30.09:0,30,403	0/0:19,0:19:51.17:0,51,713	0/0:21,0:20:57.17:0,57,766	0/0:14,0:14:36.12:0,36,504	0/0:17,0:17:51.17:0,51,714	0/0:18,0:18:54.18:0,54,754	0/0:20,0:20:51.17:0,51,713	0/0:20,0:20:57.17:0,57,763	0/0:8,0:8:21.05:0,21,275	0/0:14,0:14:42.14:0,42,587	0/0:15,0:15:35.85:0,36,502	0/0:20,0:20:48.12:0,48,650	0/0:26,0:26:69.19:0,69,944	0/0:25,0:25:69.23:0,69,966	0/0:29,0:29:78.25:0,78,1073	1/1:0,14:14:42.13:503,42,0
chr10	94236075	.	C	CT	639.18	PASS	AB=0.944;AC=6;AF=0.107;AN=56;BaseQRankSum=-0.568;DP=504;FS=6.548;HRun=11;HaplotypeScore=54.1260;InbreedingCoeff=0.6225;MQ=65.47;MQ0=1;MQRankSum=-2.258;QD=9.40;ReadPosRankSum=-1.879;VQSLOD=1.8063;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,1:24:32.21:0,32,426	0/0:8,0:8:17.92:0,18,139	0/1:12,0:9:3.69:4,0,13	0/0:2,0:2:5.48:0,5,32	0/0:20,0:21:55.72:0,56,416	0/0:23,0:24:52.80:0,53,398	0/0:10,0:10:25.67:0,26,185	1/1:10,18:29:30.87:494,31,0	0/0:13,0:14:31.82:0,32,237	0/0:29,0:31:60.15:0,60,435	0/0:12,0:12:24.75:0,25,173	0/0:13,0:14:28.92:0,29,215	0/0:14,1:16:16.04:0,16,287	0/0:17,0:18:16:0,16,247	0/0:21,0:22:58.05:0,58,431	0/0:17,0:17:44.82:0,45,348	0/0:23,2:26:9.90:0,10,433	0/0:18,1:19:15.60:0,16,284	0/0:24,0:24:62.75:0,63,487	0/0:27,0:28:43.32:0,43,505	0/0:17,0:17:47.82:0,48,371	0/0:11,0:11:29.88:0,30,232	0/1:13,2:16:14.01:14,0,261	0/0:15,0:16:40.88:0,41,308	0/0:17,0:18:40.23:0,40,290	0/0:17,0:17:23.84:0,24,186	0/0:26,0:27:64.76:0,65,492	1/1:1,9:11:26.89:258,27,0
chr10	94236946	.	C	CTCTCTG	4196.61	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=13.969;DP=792;FS=13.806;HRun=0;HaplotypeScore=180.5024;InbreedingCoeff=0.8377;MQ=65.32;MQ0=19;MQRankSum=1.310;QD=15.66;ReadPosRankSum=0.455;VQSLOD=2.4677;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:41.65:0,42,760	1/1:13,0:13:23.43:240,23,0	0/0:74,0:30:14.96:0,15,170	0/0:97,0:43:18.56:0,19,340	1/1:33,0:32:45.12:500,45,0	0/0:24,0:24:57.15:0,57,1058	0/0:16,0:16:27.07:0,27,490	0/1:36,0:33:99:126,0,138	1/1:13,0:13:15.03:158,15,0	1/1:30,0:29:66.16:723,66,0	1/1:18,0:18:21.06:233,21,0	0/0:25,0:25:57.10:0,57,1003	0/0:22,0:22:54.17:0,54,1095	0/0:22,0:22:42.10:0,42,755	1/1:25,0:25:51.14:565,51,0	1/1:21,0:21:48.13:533,48,0	1/1:9,17:28:9.02:216,9,0	1/1:20,0:20:42.59:468,43,0	0/0:24,0:22:33.07:0,33,547	0/0:32,0:32:84.25:0,84,1610	0/0:38,0:38:90.19:0,90,1674	0/0:21,0:21:39.09:0,39,706	0/0:22,0:22:54.10:0,54,998	0/0:34,0:34:69.14:0,69,1272	1/1:20,0:20:33.09:366,33,0	0/0:20,0:20:36.10:0,36,650	0/0:28,0:27:60.17:0,60,1182	0/1:11,0:11:14.13:68,0,14
chr10	94236952	.	G	GTCTC	10262.32	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-8.574;DP=798;FS=8.972;HRun=0;HaplotypeScore=136.0418;InbreedingCoeff=0.9215;MQ=62.67;MQ0=24;MQRankSum=4.048;QD=35.76;ReadPosRankSum=1.141;VQSLOD=4.9132;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:63.12:0,63,962	1/1:1,12:13:24.08:606,24,0	0/0:68,0:24:22.89:0,23,516	0/0:96,0:37:34.09:0,34,673	1/1:2,33:35:45.15:1186,45,0	0/0:27,0:27:78.18:0,78,1258	0/0:15,0:15:34:0,34,624	1/1:39,0:36:72.25:660,72,0	1/1:1,12:13:15.05:386,15,0	1/1:0,30:30:84.27:1983,84,0	1/1:3,18:21:21.07:552,21,0	0/0:24,0:24:69.22:0,69,1199	0/0:20,0:20:57.18:0,57,1017	0/0:21,0:21:60.13:0,60,943	1/1:1,27:30:51.18:1345,51,0	1/1:0,20:20:48.16:1265,48,0	0/1:28,0:28:27.18:27,0,204	1/1:12,11:23:30.11:1172,30,0	0/0:21,0:19:54.19:0,54,970	0/0:30,0:30:87.28:0,87,1577	0/0:37,0:37:99:0,102,1823	0/0:19,0:19:54.14:0,54,884	0/0:23,0:23:66.19:0,66,1133	0/0:35,0:35:84.17:0,84,1443	1/1:4,18:22:36.10:893,36,0	0/0:18,0:18:45.12:0,45,740	0/0:27,0:27:72.25:0,72,1308	1/1:11,0:11:17.78:187,18,0
chr10	94236956	.	CTG	C	1161.28	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=2.261;DP=809;FS=0.000;HRun=0;HaplotypeScore=142.1242;InbreedingCoeff=0.6117;MQ=61.21;MQ0=24;MQRankSum=-4.283;QD=10.56;ReadPosRankSum=-4.977;VQSLOD=2.1474;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:55:0,55,982	0/0:14,0:14:15.36:0,15,174	0/0:69,0:25:30.13:0,30,588	0/0:94,0:35:49.38:0,49,772	0/0:33,0:32:46.34:0,46,365	0/0:27,0:27:81.24:0,81,1454	0/0:15,0:15:38.74:0,39,685	1/1:33,9:39:69.67:875,70,0	0/0:12,0:12:17.88:0,18,130	0/1:35,0:34:99:177,0,474	0/0:25,0:25:50.71:0,51,371	0/0:24,0:24:69.22:0,69,1297	0/0:21,0:21:60.19:0,60,1109	0/0:22,0:22:66.14:0,66,1073	0/0:30,0:30:15.03:0,15,325	0/0:19,0:19:47.82:0,48,367	0/0:30,0:30:29.45:0,29,349	0/1:24,0:24:52.07:52,0,363	0/0:21,0:19:54.19:0,54,1028	0/0:32,0:32:96.13:0,96,1708	0/0:37,0:37:99:0,108,2030	0/0:21,0:21:62.98:0,63,1029	0/0:24,0:24:69.22:0,69,1288	0/0:36,0:36:90.29:0,90,1652	0/0:19,0:19:38.89:0,39,326	0/0:19,0:19:54.13:0,54,882	0/0:28,0:28:81.24:0,81,1470	1/1:9,0:9:16.85:193,17,0
chr10	94237151	.	CAAA	C	10259.79	PASS	AB=0.903;AC=19;AF=0.339;AN=56;BaseQRankSum=17.498;DP=627;FS=1.006;HRun=5;HaplotypeScore=97.7460;InbreedingCoeff=0.9178;MQ=70.19;MQ0=0;MQRankSum=-1.626;QD=39.92;ReadPosRankSum=4.071;VQSLOD=3.4035;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.19:0,69,1512	1/1:0,14:14:42.14:702,42,0	0/0:11,0:11:33.11:0,33,693	0/0:6,0:6:15.05:0,15,326	1/1:0,38:38:99:1650,99,0	0/0:26,0:26:78.25:0,78,1755	0/0:12,0:12:36.11:0,36,759	0/0:37,0:37:99:0,105,2395	1/1:0,23:23:63.22:1050,63,0	1/1:2,29:31:87.28:1429,87,0	1/1:1,25:26:66.22:1100,66,0	0/0:26,0:26:75.26:0,75,1726	0/0:22,0:22:63.22:0,63,1453	0/0:16,0:16:48.16:0,48,1084	1/1:0,19:19:51.17:852,51,0	1/1:0,21:21:63.22:1053,63,0	0/0:27,0:27:81.27:0,81,1793	1/1:0,22:22:48.16:800,48,0	0/0:22,0:22:66.23:0,66,1522	0/0:34,0:33:96.33:0,96,2214	0/0:14,0:14:42.14:0,42,959	0/0:11,0:11:33.11:0,33,761	0/0:28,0:28:84.29:0,84,1938	0/0:11,0:11:33.11:0,33,744	1/1:1,34:35:93.32:1555,93,0	0/1:25,3:28:69.11:69,0,1576	0/0:28,0:26:84.27:0,84,1831	0/0:15,0:15:45.15:0,45,1038
chr10	94239788	.	CA	C	881.43	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.937;DP=642;FS=0.000;HRun=7;HaplotypeScore=87.4413;InbreedingCoeff=0.9930;MQ=68.10;MQ0=4;MQRankSum=-4.619;QD=20.99;ReadPosRankSum=-1.466;VQSLOD=2.5658;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.11:0,75,920	0/0:10,0:10:27.09:0,27,340	0/0:29,0:13:18.29:0,18,274	0/0:27,0:15:28.42:0,28,193	0/0:38,0:38:99:0,108,1358	0/0:21,0:21:57.17:0,57,706	0/0:15,0:15:39.04:0,39,469	1/1:8,20:28:63.12:636,63,0	0/0:20,0:20:60.18:0,60,743	0/0:21,0:21:63.18:0,63,769	0/0:17,0:17:45.14:0,45,566	0/0:18,0:18:51.15:0,51,629	0/0:21,0:21:60.15:0,60,737	0/0:28,0:28:75.24:0,75,943	0/0:24,0:24:66.21:0,66,830	0/0:18,0:18:54.17:0,54,679	0/0:29,0:29:84.23:0,84,1035	0/0:20,0:20:54.17:0,54,679	0/0:19,0:19:54.17:0,54,679	0/0:35,0:35:90.28:0,90,1119	0/0:8,0:8:21.07:0,21,264	0/0:22,0:22:63.20:0,63,791	0/0:26,0:26:66.21:0,66,830	0/0:18,0:18:42.13:0,42,528	0/0:24,0:24:69.22:0,69,867	0/0:22,0:22:66.21:0,66,830	0/0:45,0:45:99:0,129,1587	1/1:2,12:14:36.08:367,36,0
chr10	94240321	.	C	CTCTGCACCCGTTGTCTTTT	49472.33	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=2.925;DP=735;FS=0.600;HRun=0;HaplotypeScore=333.9584;InbreedingCoeff=0.9195;MQ=78.04;MQ0=0;MQRankSum=-19.761;QD=152.69;ReadPosRankSum=-2.341;VQSLOD=3.7925;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,111,5476	1/1:1,7:10:30.10:2719,30,0	0/0:22,0:22:52.37:0,52,2229	0/0:21,0:21:48.13:0,48,1775	1/1:27,13:42:87.30:5392,87,0	0/0:25,0:25:69.24:0,69,3491	0/0:22,0:22:63.22:0,63,3006	1/1:40,0:40:99:6424,105,0	1/1:14,10:27:66.23:5100,66,0	1/1:27,4:37:99:5266,105,0	1/1:15,7:24:57.20:3673,57,0	0/0:22,0:22:63.22:0,63,3278	0/0:26,0:26:69.20:0,69,2988	0/0:26,0:26:78.25:0,78,3688	1/1:19,6:27:72.25:4950,72,0	1/1:9,9:22:51.17:3392,51,0	1/1:12,7:20:45.15:3338,45,0	1/1:7,5:13:33.11:2400,33,0	0/0:24,0:24:72.25:0,72,3294	0/0:30,0:30:87.28:0,87,4225	0/0:35,0:35:99:0,102,4536	0/0:21,0:21:57.17:0,57,2625	0/0:30,0:30:87.30:0,87,4403	0/0:28,0:28:78.27:0,78,3895	1/1:17,14:35:84.29:5994,84,0	0/1:20,0:20:99:217,0,2393	0/0:34,0:33:99:0,99,4650	1/1:2,1:5:9.03:606,9,0
chr10	94240953	.	G	GT	403.11	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.268;DP=562;FS=0.835;HRun=9;HaplotypeScore=56.4860;InbreedingCoeff=0.8021;MQ=80.86;MQ0=0;MQRankSum=0.872;QD=20.16;ReadPosRankSum=0.051;VQSLOD=4.0733;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:65.95:0,66,568	0/0:11,0:11:29.99:0,30,260	0/0:18,0:17:8.56:0,9,214	0/0:14,0:14:3.54:0,4,114	0/0:37,0:37:72.90:0,73,807	0/0:23,0:23:59.98:0,60,521	0/0:21,0:21:56.97:0,57,491	0/0:27,0:26:62.97:0,63,545	0/0:17,0:17:38.93:0,39,329	0/0:24,0:24:65.98:0,66,573	0/0:20,0:20:59.99:0,60,520	0/0:18,0:18:41.97:0,42,365	0/0:22,0:22:59.98:0,60,521	0/0:14,0:14:38.99:0,39,338	0/0:18,0:18:38.98:0,39,339	0/0:10,0:10:26.98:0,27,234	1/1:2,18:20:45.12:498,45,0	0/0:7,0:7:14.97:0,15,125	0/0:18,0:18:38.97:0,39,338	0/0:36,0:36:98.94:0,99,852	0/0:15,0:15:32.98:0,33,287	0/0:29,0:29:74.95:0,75,647	0/0:24,0:24:56.97:0,57,495	0/0:10,0:10:26.93:0,27,223	0/0:23,1:24:38.78:0,39,560	0/0:22,0:22:47.97:0,48,417	0/0:24,0:24:62.95:0,63,538	0/0:13,0:13:38.99:0,39,338
chr10	94243528	.	T	TATA	1384.03	PASS	AC=28;AF=0.778;AN=36;BaseQRankSum=-0.129;DP=167;FS=0.000;HRun=0;HaplotypeScore=28.0763;InbreedingCoeff=0.4321;MQ=45.65;MQ0=5;MQRankSum=-0.904;QD=12.36;ReadPosRankSum=-1.383;VQSLOD=2.1779;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:9:5.75:48,6,0	1/1:1,0:3:3.01:39,3,0	./.	./.	1/1:5,0:5:7.20:31,7,0	1/1:2,3:5:6.02:117,6,0	./.	1/1:14,6:19:27.01:377,27,0	./.	./.	./.	1/1:6,1:7:3.01:58,3,0	1/1:4,2:6:9.03:170,9,0	1/1:2,1:3:3.01:58,3,0	1/1:1,0:2:3.01:39,3,0	./.	1/1:10,0:13:6.01:65,6,0	1/1:7,1:10:9.03:110,9,0	0/0:7,0:5:3.01:0,3,40	./.	0/0:4,0:4:6.02:0,6,81	./.	./.	1/1:0,1:1:3.01:58,3,0	1/1:4,0:6:3.01:39,3,0	0/0:3,0:3:3.01:0,3,40	0/0:5,0:5:6.02:0,6,81	1/1:8,10:18:15.05:291,15,0
chr10	94243821	.	CT	C	148.48	PASS	AB=0.789;AC=2;AF=0.036;AN=56;BaseQRankSum=2.814;DP=404;FS=8.436;HRun=9;HaplotypeScore=59.9930;InbreedingCoeff=0.1272;MQ=65.44;MQ0=8;MQRankSum=0.203;QD=4.37;ReadPosRankSum=0.853;VQSLOD=0.0397;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:72.14:0,72,800	0/0:6,0:6:18.05:0,18,208	0/0:8,0:5:6.01:0,6,60	0/1:13,1:12:19.32:19,0,183	0/0:11,0:11:30.09:0,30,346	0/0:8,0:8:18.04:0,18,195	0/0:7,0:7:15.04:0,15,173	0/0:25,0:24:56.74:0,57,606	0/0:12,0:12:29.99:0,30,305	0/0:12,0:12:27.08:0,27,312	0/0:7,0:7:21.06:0,21,238	0/0:13,0:13:18.05:0,18,208	0/0:12,0:12:20.98:0,21,205	0/0:18,0:18:27.47:0,27,282	0/0:21,0:21:51.05:0,51,550	0/0:21,0:20:44.59:0,45,490	0/1:9,11:19:4.87:217,0,5	0/0:16,0:15:36:0,36,380	0/0:20,0:20:51.10:0,51,564	0/0:9,0:8:15.04:0,15,173	0/0:21,0:21:42.12:0,42,482	0/0:6,0:5:12.04:0,12,138	0/0:5,0:5:9.03:0,9,104	0/0:17,0:17:30.09:0,30,344	0/0:9,0:8:22.31:0,22,245	0/0:20,0:20:48.13:0,48,545	0/0:14,0:14:35.59:0,36,389	0/0:15,1:14:8.64:0,9,353
chr10	94244762	.	G	GA	1224.63	PASS	AB=0.923;AC=5;AF=0.089;AN=56;BaseQRankSum=-7.471;DP=505;FS=1.349;HRun=7;HaplotypeScore=50.5214;InbreedingCoeff=0.8209;MQ=78.12;MQ0=0;MQRankSum=-1.450;QD=23.11;ReadPosRankSum=-4.120;VQSLOD=1.7154;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:51.07:0,51,492	0/0:6,0:6:18.02:0,18,168	0/1:11,0:12:1.96:2,0,174	0/0:12,0:12:26.88:0,27,226	0/0:29,0:29:69.09:0,69,666	0/0:16,0:16:45.07:0,45,434	0/0:13,0:13:32.11:0,32,304	1/1:4,33:37:99:1195,99,0	0/0:12,0:12:27.04:0,27,261	0/0:33,0:33:87.13:0,87,840	0/0:24,0:24:57.06:0,57,539	0/0:17,0:17:48.08:0,48,463	0/0:15,0:15:42.07:0,42,406	0/0:17,0:17:42.06:0,42,406	0/0:16,0:17:47.11:0,47,440	0/0:24,0:24:69.10:0,69,660	0/0:8,0:8:21.03:0,21,203	0/0:12,0:12:15.69:0,16,221	0/0:18,0:18:51.08:0,51,492	0/0:28,0:28:75.12:0,75,724	0/0:8,0:8:21.03:0,21,203	0/0:11,0:11:33.04:0,33,313	0/0:21,0:21:57.09:0,57,550	0/0:8,0:8:15.02:0,15,145	0/0:20,0:20:54.09:0,54,522	0/0:30,0:30:84.13:0,84,811	0/0:32,0:32:90.14:0,90,869	1/1:0,4:4:12.04:145,12,0
chr10	94245038	.	CA	C	6788.96	PASS	AB=0.907;AC=37;AF=0.661;AN=56;BaseQRankSum=8.366;DP=476;FS=1.341;HRun=10;HaplotypeScore=53.2074;InbreedingCoeff=0.7716;MQ=73.90;MQ0=0;MQRankSum=-0.388;QD=18.75;ReadPosRankSum=3.016;VQSLOD=5.4859;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:36.10:0,36,398	1/1:0,8:8:24:208,24,0	0/1:10,1:11:21.68:22,0,82	0/1:12,1:11:7.54:8,0,141	1/1:1,29:30:83.98:729,84,0	0/0:22,0:22:54.15:0,54,597	0/0:14,0:14:33.09:0,33,365	1/1:8,0:26:36.66:108,37,0	1/1:2,17:19:20.81:410,21,0	1/1:2,22:24:65.98:573,66,0	1/1:1,25:26:71.98:625,72,0	0/0:11,0:11:30.08:0,30,332	0/0:14,0:14:33.09:0,33,365	0/0:10,0:10:30.07:0,30,326	1/1:2,17:19:44.99:391,45,0	1/1:2,13:16:38.02:319,38,0	1/1:1,19:20:50.99:443,51,0	1/1:5,18:23:50.98:443,51,0	1/1:2,12:14:35.99:313,36,0	1/1:1,26:27:71.97:625,72,0	1/1:1,4:5:14.94:122,15,0	0/0:7,0:8:17.88:0,18,180	0/0:19,0:18:48.11:0,48,522	0/1:6,1:7:11.02:11,0,114	1/1:0,15:15:38.99:339,39,0	1/1:5,17:22:50.97:443,51,0	1/1:1,27:29:46.84:624,47,0	1/1:2,0:8:12.22:36,12,0
chr10	94245771	.	GA	G	885.14	PASS	AB=0.938;AC=7;AF=0.125;AN=56;BaseQRankSum=6.863;DP=520;FS=11.827;HRun=11;HaplotypeScore=53.2924;InbreedingCoeff=0.7891;MQ=75.17;MQ0=1;MQRankSum=-1.161;QD=12.64;ReadPosRankSum=-0.050;VQSLOD=1.8477;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:42.11:0,42,448	0/0:8,0:8:21.05:0,21,224	0/0:24,1:23:15.80:0,16,293	0/0:13,0:9:10.65:0,11,104	0/0:26,0:26:69.16:0,69,723	0/0:18,0:19:49.20:0,49,497	0/0:9,0:9:27.07:0,27,288	1/1:3,21:25:61.94:496,62,0	0/0:20,1:21:29.50:0,29,519	0/0:31,3:35:22.11:0,22,815	0/0:22,0:23:35.68:0,36,552	0/0:10,1:11:8.40:0,8,283	0/0:22,0:22:63.15:0,63,664	0/0:16,0:17:50.93:0,51,497	0/0:13,0:13:36.09:0,36,383	0/0:16,0:16:45.08:0,45,459	1/1:2,17:21:40.03:307,40,0	0/1:13,1:15:3.80:4,0,141	0/0:8,1:9:2.42:0,2,231	0/0:15,0:15:33.07:0,33,342	0/0:9,0:9:18.03:0,18,185	0/0:18,0:18:45.09:0,45,466	0/0:17,1:19:23.34:0,23,437	0/0:10,0:11:23.89:0,24,238	0/0:27,0:27:56.39:0,56,776	0/0:30,0:30:69.09:0,69,702	0/0:32,3:35:59.55:0,60,824	1/1:0,9:9:26.97:222,27,0
chr10	94245920	.	C	CGGA	9101.85	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-12.808;DP=604;FS=17.720;HRun=0;HaplotypeScore=85.6304;InbreedingCoeff=0.9991;MQ=84.78;MQ0=0;MQRankSum=-1.913;QD=51.42;ReadPosRankSum=2.656;VQSLOD=5.7384;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.20:0,60,980	0/0:9,0:9:21.07:0,21,343	0/0:22,0:22:60.20:0,60,954	0/0:22,0:22:60.20:0,60,942	0/0:28,0:28:84.29:0,84,1372	1/1:5,23:28:72.25:1577,72,0	1/1:0,16:16:45.15:1004,45,0	0/0:31,0:31:84.20:0,84,1282	0/0:17,0:17:48.16:0,48,778	0/0:19,0:19:48.16:0,48,784	0/0:20,0:20:54.16:0,54,834	1/1:4,19:23:57.19:1242,57,0	1/1:2,25:27:63.22:1406,63,0	1/1:1,14:17:39.13:859,39,0	0/0:19,0:19:51.16:0,51,803	0/0:16,0:16:48.16:0,48,773	0/0:25,0:25:75.26:0,75,1213	0/0:11,0:11:30.10:0,30,490	0/0:20,0:20:51.17:0,51,822	0/0:33,0:33:90.31:0,90,1457	0/0:26,0:26:66.22:0,66,1069	1/1:4,17:22:36.12:804,36,0	1/1:3,23:27:63.22:1406,63,0	1/1:2,15:17:36.59:804,37,0	0/0:21,0:21:60.20:0,60,980	0/0:26,0:26:69.18:0,69,1054	0/0:30,0:30:87.30:0,87,1421	0/0:11,0:11:33.11:0,33,511
chr10	94247280	.	AT	A	8561.58	PASS	AB=0.529;AC=41;AF=0.732;AN=56;BaseQRankSum=9.764;DP=532;FS=0.802;HRun=9;HaplotypeScore=53.4157;InbreedingCoeff=0.9172;MQ=70.08;MQ0=0;MQRankSum=-0.073;QD=21.90;ReadPosRankSum=3.172;VQSLOD=5.5932;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:66.04:604,66,0	0/1:1,8:9:7.60:193,0,8	0/0:10,0:10:26.89:0,27,277	0/0:10,0:9:17.16:0,17,162	1/1:5,28:33:81.03:741,81,0	1/1:1,18:19:48.02:439,48,0	1/1:2,14:16:33.02:302,33,0	1/1:10,23:33:69.02:627,69,0	1/1:1,16:17:36.02:329,36,0	1/1:1,17:18:51.03:467,51,0	1/1:1,22:23:57.02:522,57,0	1/1:1,17:18:51.03:467,51,0	1/1:1,18:19:47.98:439,48,0	1/1:3,12:15:33.01:302,33,0	1/1:6,14:20:36.01:330,36,0	1/1:0,14:14:39.02:357,39,0	1/1:2,17:19:45.02:412,45,0	1/1:1,7:8:21.01:192,21,0	0/0:23,0:24:68.95:0,69,743	0/0:26,0:26:72.20:0,72,821	0/0:9,0:9:24.06:0,24,267	1/1:3,13:16:30.01:275,30,0	1/1:2,18:20:54.03:494,54,0	1/1:0,11:11:30.02:275,30,0	1/1:4,24:28:69.03:632,69,0	0/0:35,0:35:90.25:0,90,1023	0/0:26,0:25:69.19:0,69,786	1/1:5,6:11:18:165,18,0
chr10	94247641	.	CAG	C	1650.17	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.947;DP=557;FS=6.824;HRun=0;HaplotypeScore=74.6238;InbreedingCoeff=0.9876;MQ=88.28;MQ0=0;MQRankSum=-2.305;QD=37.50;ReadPosRankSum=-3.640;VQSLOD=4.4512;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1776	0/0:7,0:7:21.07:0,21,378	0/0:27,0:27:67.40:0,67,1039	0/0:25,0:25:46.39:0,46,892	0/0:31,0:31:93.30:0,93,1638	0/0:23,0:23:66.23:0,66,1189	0/0:15,0:15:36.11:0,36,619	1/1:2,33:35:99:1393,102,0	0/0:15,0:15:45.15:0,45,810	0/0:27,0:27:78.27:0,78,1405	0/0:27,0:27:72.25:0,72,1296	0/0:9,0:9:24.08:0,24,432	0/0:18,0:18:51.17:0,51,919	0/0:17,0:17:51.17:0,51,919	0/0:13,0:13:30.10:0,30,536	0/0:16,0:16:48.16:0,48,865	0/0:26,0:26:75.24:0,75,1277	0/0:6,0:6:15.05:0,15,270	0/0:24,0:24:69.24:0,69,1243	0/0:17,0:17:48.16:0,48,859	0/0:16,0:16:48.16:0,48,856	0/0:10,0:10:30.10:0,30,533	0/0:13,0:13:36.12:0,36,648	0/0:28,0:28:78.27:0,78,1404	0/0:16,0:16:48.16:0,48,864	0/0:23,0:23:69.24:0,69,1241	0/0:29,0:28:87.30:0,87,1566	1/1:0,9:9:27.09:378,27,0
chr10	94248067	.	TAA	T	9643.83	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=7.242;DP=544;FS=3.417;HRun=11;HaplotypeScore=83.3605;InbreedingCoeff=0.8797;MQ=72.25;MQ0=6;MQRankSum=-1.945;QD=23.46;ReadPosRankSum=3.702;VQSLOD=4.8375;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:45.10:479,45,0	1/1:0,6:6:15.04:160,15,0	0/1:13,0:11:4.44:4,0,161	0/0:18,0:18:29.20:0,29,353	1/1:2,32:33:87.17:924,87,0	1/1:1,17:18:51.13:543,51,0	1/1:0,11:13:38.57:375,39,0	1/1:8,0:27:53.32:223,53,0	1/1:2,20:21:57.14:606,57,0	1/1:1,23:24:69.12:721,69,0	1/1:1,21:21:57.14:606,57,0	1/1:3,17:20:45.10:479,45,0	1/1:4,13:17:30.06:319,30,0	1/1:2,17:19:51.12:543,51,0	1/1:1,20:20:51.13:543,51,0	1/1:1,20:21:51.12:543,51,0	1/1:3,0:21:9.65:145,10,0	1/1:2,15:17:45.10:479,45,0	0/0:18,0:17:51.17:0,51,784	0/0:27,0:27:72.22:0,72,1044	0/0:6,0:6:15.05:0,15,231	1/1:0,17:17:48.12:510,48,0	1/1:2,16:18:45.02:478,45,0	1/1:0,13:13:30.08:319,30,0	1/1:2,20:22:60.14:639,60,0	0/0:26,0:29:79.72:0,80,1105	0/0:34,0:35:93.31:0,93,1411	1/1:2,0:3:1.36:6,1,0
chr10	94248521	.	TAGGA	T	33.12	PASS	AB=0.973;AC=7;AF=0.125;AN=56;BaseQRankSum=6.414;DP=542;FS=5.353;HRun=0;HaplotypeScore=200.5003;InbreedingCoeff=0.1017;MQ=61.13;MQ0=2;MQRankSum=-5.850;QD=0.43;ReadPosRankSum=-2.541;VQSLOD=1.9386;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:47.73:0,48,538	0/0:11,0:11:22.29:0,22,290	0/0:48,0:45:99:0,132,3432	0/0:48,0:43:99:0,117,2949	0/0:22,0:23:8.84:0,9,101	0/1:15,0:15:0.94:1,0,250	0/0:27,0:26:29.85:0,30,539	0/0:9,0:9:27.06:0,27,495	0/0:9,2:11:9.07:0,9,179	0/1:10,1:11:18.12:18,0,291	1/1:10,1:11:4.52:33,5,0	0/0:11,0:12:21.01:0,21,261	0/1:18,0:18:41.99:42,0,185	0/0:17,1:19:9.51:0,10,234	0/1:18,1:19:46.13:46,0,309	0/0:15,0:15:14.94:0,15,245	0/0:21,0:21:19.41:0,19,290	0/1:3,0:3:12.39:12,0,95	0/0:20,0:20:60.21:0,60,1588	0/0:14,0:14:42.14:0,42,1170	0/0:58,0:58:99:0,157,4323	0/0:9,0:9:8.96:0,9,95	0/0:18,0:18:15.05:0,15,210	0/0:24,0:24:26.38:0,26,264	0/0:16,0:16:32.41:0,32,375	0/0:19,0:19:57.19:0,57,1599	0/0:15,0:15:45.15:0,45,1245	0/0:3,0:3:6.45:0,6,56
chr10	94248523	.	GGAGTAT	G	3461.59	PASS	AB=0.853;AC=30;AF=0.536;AN=56;BaseQRankSum=9.894;DP=548;FS=4.172;HRun=0;HaplotypeScore=202.5384;InbreedingCoeff=0.1189;MQ=59.65;MQ0=4;MQRankSum=-10.104;QD=10.82;ReadPosRankSum=-5.583;VQSLOD=1.3686;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,1:23:1.31:236,1,0	0/1:9,1:10:67.13:104,0,67	0/0:55,0:47:99:0,135,3704	0/0:46,0:42:99:0,111,3227	1/1:19,4:23:8.64:92,9,0	0/1:9,6:15:8.54:248,0,9	0/1:18,8:25:84.37:393,0,84	0/1:10,0:10:27.47:27,0,316	0/1:9,2:11:10.41:84,0,10	0/1:11,1:12:31.53:173,0,32	1/1:12,0:12:4.08:11,4,0	1/1:8,3:11:10.42:82,10,0	1/1:15,3:18:29.42:369,29,0	1/1:18,2:20:34.99:292,35,0	0/1:14,5:19:16.76:238,0,17	0/1:8,6:14:10.84:165,0,11	0/1:18,2:20:99:389,0,100	0/1:3,0:3:0.07:19,0,0	0/0:19,0:19:43.54:0,44,1633	0/0:15,0:15:42.14:0,42,1384	0/0:57,0:57:99:0,150,5105	1/1:8,2:10:9.85:95,10,0	0/1:13,5:18:26.74:57,0,27	1/1:21,4:25:27.09:225,27,0	0/1:15,2:17:37.79:38,0,101	0/0:20,0:20:41.84:0,42,1998	0/0:15,0:15:45.13:0,45,1506	1/1:3,0:3:9.01:123,9,0
chr10	94248526	.	GTAT	G	159.99	PASS	AB=0.984;AC=11;AF=0.196;AN=56;BaseQRankSum=7.747;DP=559;FS=2.893;HRun=0;HaplotypeScore=196.4901;InbreedingCoeff=0.1422;MQ=55.14;MQ0=5;MQRankSum=-6.089;QD=1.02;ReadPosRankSum=-0.703;VQSLOD=2.7846;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,1:24:20.40:0,20,237	0/0:10,0:10:7.91:0,8,199	0/0:55,0:46:99:0,137,2958	0/0:44,0:38:99:0,114,2544	0/1:21,1:22:0.32:1,0,0	0/1:15,0:15:14.41:14,0,83	0/1:27,0:27:77.93:78,0,340	0/0:10,0:10:29.77:0,30,606	0/0:15,0:15:9.06:0,9,117	0/0:13,0:13:17.77:0,18,362	0/0:13,0:13:5.57:0,6,68	0/0:12,0:12:0.99:0,1,17	0/1:15,0:15:29.51:45,0,30	0/1:19,0:19:2.97:51,0,3	0/0:20,0:20:3.46:0,3,156	0/0:13,0:13:4.36:0,4,105	0/1:21,0:21:36.62:37,0,160	0/0:5,0:5:15.03:0,15,169	0/0:19,0:19:57.19:0,57,1266	0/0:14,0:14:42.14:0,42,1016	0/0:59,0:59:99:0,163,3809	1/1:7,1:8:2.84:14,3,0	0/0:18,0:19:5.73:0,6,66	0/1:25,1:26:5.43:44,0,5	0/0:18,0:19:21.67:0,22,311	0/0:21,0:21:57.13:0,57,1402	0/0:16,0:16:48.16:0,48,1126	1/1:3,0:3:0.93:7,1,0
chr10	94248537	.	TAGGG	T	3044.92	PASS	AB=0.712;AC=27;AF=0.482;AN=56;BaseQRankSum=10.261;DP=597;FS=11.340;HRun=0;HaplotypeScore=179.4918;InbreedingCoeff=0.0114;MQ=51.66;MQ0=10;MQRankSum=-10.502;QD=8.25;ReadPosRankSum=3.037;VQSLOD=2.1694;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,6:23:23.59:24,0,142	0/1:8,2:10:34.05:109,0,34	0/0:47,0:35:82.88:0,83,2129	0/0:39,0:29:62.40:0,62,1631	0/1:20,7:27:0.63:1,0,1	0/1:2,12:16:43.54:127,0,44	0/1:13,16:30:99:407,0,276	0/0:12,0:12:0.67:0,1,537	0/1:7,6:14:7.73:102,0,8	0/1:13,3:15:99:375,0,128	1/1:13,1:14:2.54:25,3,0	1/1:1,16:19:1.47:137,1,0	1/1:2,13:16:10.10:338,10,0	1/1:0,20:21:30.07:511,30,0	0/1:10,8:21:40.01:125,0,40	1/1:10,6:16:8.34:70,8,0	0/1:6,17:26:77.02:399,0,77	0/1:3,1:4:30.42:30,0,50	0/0:17,0:17:51.14:0,51,1094	0/0:15,0:15:42.62:0,43,1046	0/0:65,0:63:99:0,106,4071	0/0:3,4:13:2.96:0,3,20	0/1:4,16:21:6.33:6,0,88	1/1:7,17:26:11.56:193,12,0	0/1:14,4:20:59.05:59,0,102	0/1:23,1:24:6.07:6,0,1482	0/0:17,0:17:48.16:0,48,1200	1/1:0,3:3:9.03:172,9,0
chr10	94248541	.	GGT	G	64.69	PASS	AB=0.943;AC=9;AF=0.161;AN=56;BaseQRankSum=0.524;DP=629;FS=4.763;HRun=0;HaplotypeScore=185.2025;InbreedingCoeff=0.0274;MQ=49.94;MQ0=12;MQRankSum=1.137;QD=0.32;ReadPosRankSum=0.599;VQSLOD=2.7167;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:8.72:0,9,66	0/0:11,0:10:10.33:0,10,74	0/0:46,0:31:10.28:0,10,124	0/0:39,0:27:6.02:0,6,81	0/0:29,0:29:2.30:0,2,23	0/1:18,0:18:15.09:15,0,20	0/0:33,0:32:19.68:0,20,222	0/0:15,0:15:13.94:0,14,88	0/0:17,0:17:16.25:0,16,159	0/0:16,0:15:29.28:0,29,227	0/0:15,0:15:6.01:0,6,62	0/1:21,0:21:4.56:5,0,23	0/0:16,0:16:6.65:0,7,70	0/0:21,0:21:9.95:0,10,52	0/0:22,0:22:10.25:0,10,91	0/0:16,0:16:8.94:0,9,80	0/0:26,0:27:11.02:0,11,73	0/0:4,0:4:5.97:0,6,45	0/0:15,0:15:19.07:0,19,214	0/1:15,0:16:6.66:7,0,294	0/1:68,3:68:75.43:75,0,1050	0/1:14,0:14:0.01:0,0,0	1/1:21,0:21:2.80:14,3,0	0/0:28,0:27:8.81:0,9,41	0/0:22,0:22:16.13:0,16,121	0/1:19,6:26:28.45:28,0,273	0/1:15,3:18:40.78:41,0,266	0/0:3,0:3:1.77:0,2,4
chr10	94248548	.	G	GTA	1070.60	PASS	AB=0.940;AC=20;AF=0.357;AN=56;BaseQRankSum=7.569;DP=669;FS=9.842;HRun=0;HaplotypeScore=189.5738;InbreedingCoeff=0.3713;MQ=46.57;MQ0=22;MQRankSum=-6.447;QD=3.89;ReadPosRankSum=3.728;VQSLOD=1.4223;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:33:8.26:0,8,59	1/1:9,3:10:16.78:220,17,0	0/0:44,0:23:53.96:0,54,519	0/0:34,0:21:41.30:0,41,410	1/1:14,18:32:1.34:5,1,0	0/0:19,0:19:10.59:0,11,57	0/1:34,0:33:17.71:18,0,191	0/0:19,0:18:42.68:0,43,351	1/1:19,0:19:19.52:171,20,0	0/1:21,1:21:22.47:212,0,22	1/1:4,13:17:5.64:59,6,0	0/0:24,0:24:20.70:0,21,158	0/1:18,0:18:23.36:23,0,107	0/1:21,0:21:63.15:63,0,92	1/1:20,2:22:9.11:150,9,0	1/1:8,10:18:8.84:92,9,0	0/0:29,0:29:4.48:0,4,194	1/1:2,3:5:5.98:78,6,0	0/0:16,0:16:44.97:0,45,443	0/0:16,0:16:23.27:0,23,435	0/0:77,0:74:99:0,183,1961	0/0:16,0:16:5.83:0,6,48	0/0:21,0:21:5.50:0,5,30	0/1:31,0:30:19.77:20,0,97	0/1:13,10:24:58.95:142,0,59	0/0:22,0:22:50.51:0,51,532	0/0:18,0:18:47.87:0,48,496	0/0:3,0:3:8.73:0,9,52
chr10	94248684	.	C	CA	1029.15	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.042;DP=588;FS=3.359;HRun=0;HaplotypeScore=67.5972;InbreedingCoeff=0.9830;MQ=78.99;MQ0=0;MQRankSum=-0.251;QD=32.16;ReadPosRankSum=-3.180;VQSLOD=2.4312;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:53:99:0,126,1543	0/0:9,0:9:26.94:0,27,301	0/0:21,0:21:44.45:0,44,631	0/0:26,0:26:58.54:0,59,789	0/0:16,0:16:38.81:0,39,456	0/0:22,0:22:65.92:0,66,823	0/0:22,0:21:57.16:0,57,758	1/1:2,25:26:72.08:964,72,0	0/0:16,0:16:39.09:0,39,514	0/0:14,0:14:36.11:0,36,486	0/0:16,0:16:42.97:0,43,509	0/0:18,0:18:51.16:0,51,692	0/0:24,0:24:71.86:0,72,940	0/0:18,0:18:54.03:0,54,658	0/0:20,0:20:57.19:0,57,791	0/0:16,0:16:48.16:0,48,667	0/0:38,0:38:99:0,111,1456	0/0:14,0:14:36.08:0,36,479	0/0:15,0:15:42.03:0,42,507	0/0:24,0:24:62.28:0,62,792	0/0:32,0:32:93.25:0,93,1248	0/0:21,0:21:59.69:0,60,678	0/0:15,0:15:41.80:0,42,464	0/0:29,0:29:80.60:0,81,1057	0/0:13,0:13:36.02:0,36,438	0/0:28,0:28:74.97:0,75,924	0/0:15,0:15:42.12:0,42,566	1/1:0,5:5:12.04:182,12,0
chr10	94249928	.	T	TC	1696.60	PASS	AB=0.597;AC=16;AF=0.286;AN=56;BaseQRankSum=-3.280;DP=546;FS=4.758;HRun=9;HaplotypeScore=73.0774;InbreedingCoeff=0.7979;MQ=78.47;MQ0=0;MQRankSum=-1.993;QD=11.31;ReadPosRankSum=0.767;VQSLOD=2.9594;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:79.26:0,79,801	0/0:4,0:4:12:0,12,104	0/0:29,0:25:5.26:0,5,272	0/0:29,1:27:17.08:0,17,173	0/0:15,0:15:41.99:0,42,363	0/1:7,12:19:8.93:206,0,9	1/1:5,10:15:21.06:232,21,0	0/0:26,0:26:39.83:0,40,341	0/0:14,0:14:41.98:0,42,361	0/0:17,0:17:38.97:0,39,335	0/0:14,0:15:31.97:0,32,266	1/1:3,13:16:15.04:166,15,0	1/1:4,14:18:21.06:232,21,0	0/1:5,13:18:7.93:148,0,8	0/0:24,0:24:62.96:0,63,543	0/0:23,0:23:62.98:0,63,547	1/1:3,1:8:5.81:34,6,0	0/0:8,0:8:23.98:0,24,204	0/0:19,0:19:41.98:0,42,364	0/0:23,0:23:62.99:0,63,547	0/0:18,0:18:41.96:0,42,364	1/1:7,14:21:26.75:285,27,0	1/1:5,10:15:24.06:265,24,0	1/1:3,17:20:30.07:324,30,0	0/0:26,0:28:66.99:0,67,545	0/0:20,0:20:53.93:0,54,461	0/0:30,0:30:80.76:0,81,680	0/0:8,0:8:18:0,18,156
chr10	94250329	.	C	CTAT	1488.38	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.609;DP=507;FS=0.745;HRun=0;HaplotypeScore=70.9707;InbreedingCoeff=0.8923;MQ=80.73;MQ0=0;MQRankSum=-6.166;QD=43.78;ReadPosRankSum=-4.006;VQSLOD=3.5180;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.02:0,45,688	0/0:10,0:10:30.09:0,30,458	0/0:18,0:18:41.25:0,41,635	0/0:10,0:10:24.05:0,24,348	0/0:30,0:30:87.28:0,87,1370	0/0:22,0:22:63.21:0,63,1004	0/0:6,0:6:15.05:0,15,241	1/1:4,25:29:75.23:1531,75,0	0/0:12,0:12:33.09:0,33,504	0/0:20,0:20:60.18:0,60,920	0/0:22,0:22:63.20:0,63,988	0/0:15,0:15:42.13:0,42,651	0/0:15,0:15:45.15:0,45,723	0/0:13,0:13:36.09:0,36,531	0/0:24,0:24:66.21:0,66,1031	0/0:21,0:21:54.17:0,54,843	0/0:12,0:12:30.10:0,30,482	0/0:14,0:14:39.13:0,39,625	0/0:21,0:21:60.16:0,60,930	0/0:23,0:23:66.21:0,66,1029	0/0:15,0:15:42.14:0,42,675	0/0:15,0:15:39.13:0,39,626	0/0:31,0:31:75.25:0,75,1198	0/0:9,0:9:27.09:0,27,427	0/0:17,0:17:45.15:0,45,723	0/0:29,0:29:75.26:0,75,1205	0/0:33,0:33:96.25:0,96,1441	1/1:2,2:5:3.01:66,3,0
chr10	94251043	.	GTA	G	296.47	PASS	AB=0.974;AC=7;AF=0.130;AN=54;BaseQRankSum=0.240;DP=290;FS=2.150;HRun=0;HaplotypeScore=84.9981;InbreedingCoeff=0.1615;MQ=57.85;MQ0=3;MQRankSum=-1.616;QD=4.30;ReadPosRankSum=-2.902;VQSLOD=1.7252;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,15:19:26.54:372,27,0	./.	1/1:6,0:3:0.37:1,0,0	0/0:6,0:2:3:0,3,26	0/0:18,0:18:36.73:0,37,325	0/0:8,0:11:9:0,9,80	0/0:3,0:4:5.99:0,6,51	0/1:26,0:26:7.06:7,0,229	0/0:6,0:6:6.01:0,6,57	0/0:13,0:13:9.94:0,10,209	0/0:17,0:17:27.50:0,27,251	0/0:4,0:5:3:0,3,27	0/0:7,0:10:15.01:0,15,153	0/0:3,0:4:2.99:0,3,27	0/0:8,0:8:6.48:0,6,56	0/0:7,0:7:9:0,9,81	0/0:9,0:9:6.12:0,6,56	0/0:12,0:12:27.03:0,27,261	0/1:11,1:12:1.74:2,0,490	0/0:8,0:8:18.06:0,18,286	0/1:6,0:6:22.48:22,0,158	0/0:1,0:2:3:0,3,27	0/0:1,0:2:3:0,3,27	0/0:1,0:2:3:0,3,27	0/0:28,0:28:49.22:0,49,440	0/0:19,0:19:45.62:0,46,717	0/0:16,0:16:42.13:0,42,660	0/0:12,0:12:1.19:0,1,106
chr10	94251054	.	T	TAC	731.40	PASS	AB=0.991;AC=21;AF=0.389;AN=54;BaseQRankSum=0.556;DP=312;FS=0.628;HRun=0;HaplotypeScore=114.5615;InbreedingCoeff=0.3465;MQ=59.98;MQ0=2;MQRankSum=-0.663;QD=5.58;ReadPosRankSum=-2.875;VQSLOD=2.6017;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:32.06:0,32,185	./.	0/1:9,0:6:11.87:12,0,46	0/0:6,0:3:5.64:0,6,65	0/0:26,0:26:36.56:0,37,233	0/1:13,0:13:3.61:4,0,13	0/1:3,0:3:15.23:15,0,39	0/1:29,2:31:1.36:427,0,1	0/1:6,0:6:8.29:8,0,13	0/0:13,0:13:12.44:0,12,172	0/0:16,0:16:27.13:0,27,179	1/1:4,0:4:2.99:24,3,0	1/1:12,0:12:8.43:80,8,0	1/1:6,0:6:2.99:24,3,0	0/0:8,0:8:8.92:0,9,65	0/0:6,0:6:8.90:0,9,59	0/1:13,0:13:11.08:11,0,46	0/1:12,0:12:2.20:2,0,83	0/0:15,0:15:45.05:0,45,619	0/0:7,0:7:21.06:0,21,300	0/0:6,0:6:17.69:0,18,197	1/1:5,0:4:2.99:24,3,0	1/1:4,0:4:2.99:24,3,0	1/1:1,0:1:2.99:24,3,0	0/0:24,0:24:50.64:0,51,330	0/0:22,0:22:63.17:0,63,856	0/0:16,0:16:45.10:0,45,656	1/1:8,4:12:6.17:213,6,0
chr10	94251056	.	T	TAC	2507.72	PASS	AB=0.969;AC=36;AF=0.667;AN=54;BaseQRankSum=6.686;DP=312;FS=0.547;HRun=0;HaplotypeScore=105.5643;InbreedingCoeff=0.5552;MQ=58.15;MQ0=2;MQRankSum=2.023;QD=11.25;ReadPosRankSum=0.282;VQSLOD=3.3206;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:29.82:0,30,217	./.	0/1:6,0:5:0.75:1,0,38	0/0:5,0:3:5.78:0,6,64	1/1:26,0:26:38.31:321,38,0	0/1:13,0:13:4.29:4,0,13	0/1:4,0:4:18.22:18,0,19	1/1:29,0:29:67.06:540,67,0	1/1:6,0:6:6.01:76,6,0	1/1:14,0:14:28.66:210,29,0	1/1:17,0:17:26.94:222,27,0	1/1:4,0:4:2.99:24,3,0	0/1:12,0:12:6.96:68,0,7	1/1:6,0:6:2.99:24,3,0	1/1:8,0:8:5.99:50,6,0	1/1:7,0:7:8.99:74,9,0	1/1:9,4:13:8.71:83,9,0	1/1:12,0:12:27.03:257,27,0	0/0:15,0:15:42.09:0,42,502	0/0:7,0:7:21.06:0,21,264	0/0:6,0:6:14.75:0,15,140	1/1:5,0:4:2.99:24,3,0	1/1:4,0:4:2.99:24,3,0	1/1:1,0:1:3:25,3,0	1/1:23,0:23:53.87:437,54,0	0/0:22,0:22:63.16:0,63,754	0/0:17,0:17:45.07:0,45,561	1/1:12,0:12:11.25:208,11,0
chr10	94251083	.	ATGG	A	592.66	PASS	AB=0.951;AC=13;AF=0.250;AN=52;BaseQRankSum=0.662;DP=411;FS=0.000;HRun=0;HaplotypeScore=157.3918;InbreedingCoeff=-0.2738;MQ=49.03;MQ0=2;MQRankSum=0.049;QD=2.82;ReadPosRankSum=-3.424;VQSLOD=1.5343;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,1:18:17.96:0,18,307	./.	0/0:7,0:3:6.02:0,6,132	0/0:9,0:5:12.04:0,12,226	0/1:31,0:30:90.79:91,0,296	0/1:18,1:19:22.94:23,0,264	0/1:7,0:7:17.67:18,0,80	0/1:37,1:38:99:99,0,1569	0/0:14,0:14:8.83:0,9,54	0/1:19,0:19:87.21:87,0,901	0/0:23,0:22:15.01:0,15,288	0/0:7,0:7:6.02:0,6,122	0/1:14,8:22:99:258,0,100	0/1:11,1:12:46.55:47,0,58	0/1:16,1:17:26.19:26,0,188	0/1:12,0:12:7.28:7,0,186	0/1:8,0:8:5.40:5,0,135	0/0:8,1:9:9.01:0,9,405	0/0:17,0:17:51.17:0,51,1058	0/1:12,1:13:8.30:8,0,708	0/0:16,0:16:48.15:0,48,1070	0/1:9,1:9:21.99:62,0,22	./.	0/1:2,0:2:0:0,0,0	0/0:24,0:24:32.96:0,33,579	0/0:22,0:22:40.25:0,40,1427	0/0:17,0:17:51.15:0,51,1074	0/0:6,0:6:10.23:0,10,110
chr10	94251086	.	G	GTAGATAGATAGATAGA	10432.01	PASS	AB=1.000;AC=40;AF=0.769;AN=52;BaseQRankSum=1.521;DP=425;FS=2.280;HRun=0;HaplotypeScore=233.3862;InbreedingCoeff=0.3701;MQ=49.00;MQ0=3;MQRankSum=-5.652;QD=30.06;ReadPosRankSum=-1.341;VQSLOD=4.0216;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:20.95:39,0,21	1/1:3,0:3:3.01:129,3,0	./.	0/0:11,0:6:6:0,6,55	1/1:31,0:30:15.05:512,15,0	1/1:19,0:19:18.06:848,18,0	1/1:7,0:7:9.50:231,10,0	1/1:39,0:39:63.19:1343,63,0	1/1:14,0:14:18.06:1017,18,0	1/1:19,0:19:42.14:1139,42,0	1/1:23,0:22:3.01:209,3,0	1/1:7,0:7:3.01:162,3,0	1/1:22,0:22:30.10:1017,30,0	1/1:13,0:13:18.05:814,18,0	1/1:17,0:17:18.06:751,18,0	1/1:12,0:12:12.04:587,12,0	1/1:5,0:11:9.03:146,9,0	0/1:9,0:9:39.70:40,0,66	0/0:17,0:16:12.04:0,12,461	0/1:13,0:13:19.10:19,0,1116	0/0:16,0:16:48.14:0,48,1630	1/1:11,0:10:12.03:423,12,0	./.	1/1:2,0:2:3.01:163,3,0	1/1:25,0:25:12.03:571,12,0	0/1:23,0:23:45.28:45,0,1675	0/0:17,0:17:30.09:0,30,1064	1/1:3,3:7:2.35:226,2,0
chr10	94251115	.	T	TA	947.60	PASS	AB=0.759;AC=8;AF=0.148;AN=54;BaseQRankSum=0.429;DP=457;FS=1.459;HRun=1;HaplotypeScore=141.1543;InbreedingCoeff=-0.2090;MQ=51.76;MQ0=5;MQRankSum=-6.669;QD=6.67;ReadPosRankSum=-3.251;VQSLOD=-0.5333;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,8:22:20.24:20,0,309	./.	0/0:10,0:6:15.05:0,15,208	0/0:12,0:9:14.23:0,14,246	0/0:14,13:26:23.80:0,24,306	0/0:11,7:18:5.89:0,6,57	0/1:10,3:13:23.89:24,0,269	0/1:18,11:29:99:554,0,274	0/0:13,6:19:15.05:0,15,210	0/1:11,9:20:99:324,0,401	0/0:11,10:20:3.01:0,3,42	0/0:4,3:7:3.01:0,3,42	0/0:22,7:29:44.88:0,45,555	0/0:12,6:18:23.94:0,24,306	0/1:13,7:20:19.64:20,0,266	0/0:6,5:11:9.03:0,9,124	0/0:16,0:16:2.17:0,2,153	0/1:4,3:8:67.50:121,0,68	0/0:17,0:15:45.14:0,45,608	0/0:19,0:19:49.88:0,50,694	0/0:18,0:18:54.18:0,54,753	0/0:10,5:14:18.06:0,18,242	0/0:7,5:12:3.01:0,3,42	0/0:4,0:4:6.02:0,6,84	0/1:17,5:22:6.84:7,0,192	0/0:20,0:20:60.20:0,60,839	0/0:19,0:19:57.17:0,57,777	0/1:7,1:7:0.27:0,0,113
chr10	94251474	.	C	CTGT	7817.87	PASS	AB=0.957;AC=19;AF=0.339;AN=56;BaseQRankSum=-8.525;DP=546;FS=1.766;HRun=0;HaplotypeScore=80.4486;InbreedingCoeff=0.9120;MQ=65.21;MQ0=0;MQRankSum=-3.087;QD=49.80;ReadPosRankSum=2.968;VQSLOD=6.7430;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,2343	1/1:0,2:2:6.02:148,6,0	0/0:28,0:27:75.25:0,75,1323	0/0:30,0:28:60.03:0,60,1324	1/1:1,16:20:36.04:886,36,0	0/0:17,0:17:51.17:0,51,940	0/0:18,0:18:54.17:0,54,952	0/0:32,0:32:93.32:0,93,1733	1/1:1,13:14:30.10:739,30,0	1/1:0,18:20:60.21:1399,60,0	1/1:0,7:11:21.07:516,21,0	0/0:22,0:22:66.23:0,66,1230	0/0:21,0:21:57.17:0,57,1018	0/0:21,0:21:60.21:0,60,1117	1/1:0,23:24:63.22:1551,63,0	1/1:2,15:17:42.14:1030,42,0	0/0:23,0:23:66.23:0,66,1217	1/1:1,14:15:39.13:951,39,0	0/0:20,0:20:57.17:0,57,974	0/0:15,0:15:45.12:0,45,776	0/0:19,0:19:57.17:0,57,1000	0/0:7,0:6:18.06:0,18,335	0/0:8,0:8:21.07:0,21,389	0/0:24,0:24:66.20:0,66,1197	1/1:2,10:11:24.08:591,24,0	0/1:21,1:22:7.56:8,0,1049	0/0:34,0:34:99:0,102,1900	0/0:7,0:7:21.07:0,21,352
chr10	94252564	.	TCA	T	1370.49	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.147;DP=474;FS=6.426;HRun=0;HaplotypeScore=67.8124;InbreedingCoeff=0.8980;MQ=74.87;MQ0=1;MQRankSum=0.081;QD=36.07;ReadPosRankSum=-1.714;VQSLOD=5.1364;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:26.90:0,27,208	0/0:5,0:5:15.04:0,15,252	0/0:11,0:12:32.56:0,33,315	0/0:9,0:9:23.78:0,24,310	0/0:32,0:32:96.29:0,96,1824	0/0:15,0:15:41.80:0,42,321	0/0:4,0:4:11.95:0,12,91	1/1:0,25:25:75.17:1066,75,0	0/0:24,0:24:69.12:0,69,1181	0/0:25,0:25:74.73:0,75,1258	0/0:14,0:14:42.12:0,42,795	0/0:24,0:24:62.63:0,63,473	0/0:18,0:18:44.64:0,45,367	0/0:23,0:23:65.74:0,66,537	0/0:24,0:24:69.17:0,69,1178	0/0:16,0:16:48.03:0,48,842	0/0:14,0:14:39.07:0,39,681	0/0:12,0:12:33.02:0,33,551	0/0:11,0:11:30.05:0,30,478	0/0:27,0:27:81.22:0,81,1468	0/0:17,0:17:48.08:0,48,869	0/0:18,0:18:44.64:0,45,323	0/0:20,0:20:41.53:0,42,386	0/0:4,0:4:3.39:0,3,62	0/0:21,0:21:63.19:0,63,1179	0/0:12,0:12:36.08:0,36,579	0/0:23,0:23:69.17:0,69,1199	1/1:0,11:13:29.58:426,30,0
chr10	94252565	.	CA	C	2419.58	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=11.503;DP=475;FS=8.871;HRun=11;HaplotypeScore=54.2178;InbreedingCoeff=0.9610;MQ=74.79;MQ0=1;MQRankSum=-2.281;QD=13.83;ReadPosRankSum=1.869;VQSLOD=3.3380;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:10:20.97:172,21,0	0/0:4,0:4:9.02:0,9,96	0/0:13,0:12:9.01:0,9,89	0/0:9,0:9:15.49:0,15,151	0/0:31,0:32:90.06:0,90,938	1/1:3,13:16:35.94:296,36,0	1/1:0,4:4:11.99:99,12,0	1/1:25,0:25:41.34:127,41,0	0/0:23,1:24:38.49:0,38,602	0/0:26,0:26:54.14:0,54,576	0/0:15,0:15:42.10:0,42,441	1/1:3,21:24:53.93:443,54,0	1/1:1,17:18:12.96:313,13,0	1/1:4,19:23:24.95:411,25,0	0/0:21,1:24:29.36:0,29,502	0/0:16,0:16:42.10:0,42,442	0/0:14,0:14:30.08:0,30,320	0/0:12,0:12:24.04:0,24,246	0/0:10,0:10:27.05:0,27,278	0/0:25,1:27:31.54:0,32,668	0/0:17,0:16:48.04:0,48,481	1/1:0,17:18:38.93:320,39,0	1/1:5,14:20:40.89:326,41,0	1/1:1,2:4:8.03:55,8,0	0/0:20,0:21:56.98:0,57,590	0/0:13,0:13:30.06:0,30,312	0/0:22,0:23:56.98:0,57,590	1/1:13,0:13:22.90:79,23,0
chr10	94252674	.	A	AT	689.05	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.736;DP=506;FS=3.958;HRun=8;HaplotypeScore=65.1848;InbreedingCoeff=0.9404;MQ=67.79;MQ0=0;MQRankSum=0.916;QD=23.76;ReadPosRankSum=-3.804;VQSLOD=2.7527;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:57.02:0,57,522	0/0:4,0:4:12.01:0,12,110	0/0:8,0:8:17.48:0,17,133	0/0:9,0:9:16.51:0,17,133	0/0:24,0:24:63.03:0,63,576	0/0:24,0:24:65.76:0,66,583	0/0:9,0:9:24.01:0,24,220	1/1:4,21:25:63.10:699,63,0	0/0:18,0:18:51.01:0,51,462	0/0:26,0:26:66.03:0,66,604	0/0:22,0:22:60.03:0,60,549	0/0:10,0:10:30.02:0,30,275	0/0:22,0:22:60.02:0,60,545	0/0:10,0:10:23.99:0,24,215	0/0:28,0:28:69:0,69,622	0/0:20,0:20:57.01:0,57,516	0/0:1,0:25:44.82:0,45,132	0/0:19,0:19:48.02:0,48,439	0/0:20,0:20:54.01:0,54,490	0/0:31,0:31:90.04:0,90,819	0/0:9,0:9:27.01:0,27,247	0/0:18,0:18:48.02:0,48,439	0/0:18,0:18:51.02:0,51,466	0/0:14,0:14:35.97:0,36,321	0/0:15,0:15:36.01:0,36,329	0/0:17,0:17:48.02:0,48,439	0/0:33,0:33:96.05:0,96,878	1/1:1,3:4:9.03:104,9,0
chr10	94252732	.	AAGGG	A	10269.93	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.089;DP=564;FS=5.769;HRun=0;HaplotypeScore=96.0794;InbreedingCoeff=0.9636;MQ=81.55;MQ0=0;MQRankSum=-5.236;QD=52.94;ReadPosRankSum=3.526;VQSLOD=6.1961;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.26:0,75,2015	1/1:0,5:5:9.03:180,9,0	0/0:18,0:18:52.73:0,53,1397	0/0:13,0:13:39.13:0,39,1051	1/1:1,28:29:78.27:1543,78,0	0/0:16,0:16:48.16:0,48,1295	0/0:11,0:11:33.11:0,33,923	0/0:28,0:28:78.27:0,78,2183	1/1:1,20:21:57.20:1138,57,0	1/1:3,23:26:72.25:1438,72,0	1/1:0,22:22:60.21:1178,60,0	0/0:13,0:13:39.13:0,39,1091	0/0:27,0:27:81.28:0,81,2209	0/0:12,0:12:36.12:0,36,1008	1/1:1,24:25:69.24:1377,69,0	1/1:1,16:17:42.14:839,42,0	0/0:17,0:17:45.15:0,45,1259	1/1:2,19:21:54.19:1078,54,0	0/0:20,0:20:57.19:0,57,1551	0/0:40,0:40:99:0,114,3169	0/0:17,0:17:48.16:0,48,1336	0/0:26,0:26:75.26:0,75,2061	0/0:20,0:20:60.21:0,60,1657	0/0:8,0:8:21.07:0,21,587	1/1:0,28:28:75.26:1498,75,0	0/0:20,1:21:3.28:0,3,1597	0/0:31,0:31:90.31:0,90,2516	0/0:7,0:7:21.07:0,21,551
chr10	94253483	.	G	GA	1691.61	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.226;DP=708;FS=0.610;HRun=0;HaplotypeScore=93.2900;InbreedingCoeff=0.9997;MQ=77.13;MQ0=0;MQRankSum=-1.257;QD=40.28;ReadPosRankSum=-1.803;VQSLOD=3.1961;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1552	0/0:14,0:14:42.14:0,42,587	0/0:12,0:12:33.11:0,33,451	0/0:17,0:17:48.16:0,48,666	0/0:32,0:32:96.32:0,96,1337	0/0:23,0:23:69.23:0,69,964	0/0:20,0:20:60.16:0,60,787	1/1:4,26:30:81.23:1238,81,0	0/0:28,0:28:84.28:0,84,1173	0/0:34,0:34:96.31:0,96,1326	0/0:18,0:18:51.17:0,51,708	0/0:24,0:24:72.24:0,72,1006	0/0:34,0:34:99:0,99,1367	0/0:21,0:21:63.21:0,63,881	0/0:33,0:33:96.32:0,96,1342	0/0:32,0:32:96.32:0,96,1342	0/0:26,0:26:72.23:0,72,988	0/0:13,0:13:36.05:0,36,479	0/0:17,0:17:51.16:0,51,697	0/0:35,0:35:99:0,105,1468	0/0:25,0:25:75.25:0,75,1048	0/0:24,0:24:69.21:0,69,930	0/0:25,0:25:72.24:0,72,1004	0/0:21,0:21:63.20:0,63,864	0/0:28,0:28:81.27:0,81,1133	0/0:37,0:37:99:0,108,1495	0/0:36,0:36:99:0,108,1489	1/1:0,12:12:36.12:575,36,0
chr10	94254027	.	TCAA	T	950.50	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.237;DP=744;FS=2.414;HRun=0;HaplotypeScore=140.7210;InbreedingCoeff=0.9691;MQ=85.52;MQ0=0;MQRankSum=-7.155;QD=35.20;ReadPosRankSum=-1.896;VQSLOD=4.0832;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.29:0,84,2063	0/0:11,0:11:33.11:0,33,813	0/0:22,0:22:42.69:0,43,1128	0/0:28,0:28:57.30:0,57,1285	0/0:27,0:27:78.24:0,78,1825	0/0:30,0:30:84.28:0,84,1967	0/0:33,0:33:99:0,99,2344	1/1:0,24:24:72.23:951,72,0	0/0:26,0:26:78.25:0,78,1869	0/0:24,0:24:72.20:0,72,1668	0/0:21,0:21:63.22:0,63,1552	0/0:23,0:23:69.21:0,69,1554	0/0:37,0:37:99:0,111,2685	0/0:37,0:37:99:0,111,2604	0/0:33,0:33:99:0,99,2426	0/0:34,0:34:99:0,102,2437	0/0:20,0:20:60.21:0,60,1423	0/0:20,0:20:57.20:0,57,1398	0/0:13,0:13:39.13:0,39,904	0/0:41,0:41:99:0,120,2803	0/0:42,0:42:99:0,126,2991	0/0:30,0:30:90.04:0,90,2131	0/0:18,0:18:54.19:0,54,1323	0/0:20,0:20:60.19:0,60,1424	0/0:25,0:25:75.26:0,75,1844	0/0:39,0:39:99:0,117,2877	0/0:35,0:35:99:0,105,2577	1/1:0,3:3:9.03:114,9,0
chr10	94254031	.	TG	T	534.96	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.077;DP=753;FS=1.464;HRun=2;HaplotypeScore=111.8632;InbreedingCoeff=0.9684;MQ=85.81;MQ0=0;MQRankSum=-7.019;QD=16.21;ReadPosRankSum=-2.978;VQSLOD=2.8195;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.23:0,78,1126	0/0:11,0:11:33.11:0,33,495	0/0:21,0:22:59.94:0,60,799	0/0:31,0:31:55.41:0,55,833	0/0:26,0:26:75.25:0,75,1124	0/0:28,0:28:78.25:0,78,1147	0/0:33,0:33:99:0,99,1482	1/1:8,22:30:78.05:586,78,0	0/0:26,0:26:78.26:0,78,1168	0/0:25,0:25:72.23:0,72,1057	0/0:24,0:24:72.23:0,72,1055	0/0:22,0:22:63.21:0,63,944	0/0:38,0:38:99:0,108,1583	0/0:35,0:35:99:0,102,1506	0/0:33,0:33:96.31:0,96,1405	0/0:33,0:33:99:0,99,1464	0/0:20,0:20:51.12:0,51,720	0/0:20,0:20:57.16:0,57,830	0/0:12,0:12:36.12:0,36,537	0/0:39,0:39:99:0,114,1703	0/0:42,0:42:99:0,120,1787	0/0:31,0:31:87.29:0,87,1301	0/0:18,0:18:54.18:0,54,809	0/0:20,0:20:57.19:0,57,854	0/0:26,0:26:78.26:0,78,1149	0/0:41,0:41:99:0,120,1736	0/0:36,0:36:99:0,108,1594	1/1:0,3:3:8.93:63,9,0
chr10	94254183	.	GA	G	656.79	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.252;DP=687;FS=2.469;HRun=8;HaplotypeScore=65.8949;InbreedingCoeff=0.9817;MQ=74.47;MQ0=1;MQRankSum=-2.279;QD=22.65;ReadPosRankSum=-3.391;VQSLOD=2.8749;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.13:0,45,532	0/0:16,0:16:42.12:0,42,496	0/0:13,0:12:24.07:0,24,268	0/0:13,0:13:24.04:0,24,265	0/0:35,0:35:90.26:0,90,1075	0/0:32,0:32:96.25:0,96,1143	0/0:15,0:15:42.11:0,42,486	1/1:2,23:25:69.07:658,69,0	0/0:23,0:23:63.19:0,63,761	0/0:37,0:37:99:0,99,1183	0/0:29,0:29:78.23:0,78,930	0/0:27,0:27:69.17:0,69,808	0/0:37,0:37:99:0,108,1300	0/0:28,0:28:69.68:0,70,825	0/0:28,0:28:81.25:0,81,978	0/0:28,0:28:66.19:0,66,786	0/0:27,0:27:81.22:0,81,964	0/0:22,0:21:57.07:0,57,641	0/0:24,1:25:40.19:0,40,741	0/0:34,0:34:93.26:0,93,1092	0/0:22,0:22:60.17:0,60,714	0/0:20,0:20:54.17:0,54,652	0/0:23,0:23:60.18:0,60,725	0/0:13,0:13:39.11:0,39,461	0/0:25,0:25:75.22:0,75,888	0/0:37,0:37:87.24:0,87,1029	0/0:33,0:33:90.27:0,90,1072	1/1:0,4:4:12.02:116,12,0
chr10	94254512	.	AATTCCTTC	A	2823.51	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.254;DP=542;FS=0.000;HRun=0;HaplotypeScore=134.9617;InbreedingCoeff=0.9863;MQ=70.59;MQ0=0;MQRankSum=-5.514;QD=61.38;ReadPosRankSum=-2.082;VQSLOD=2.8988;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.20:0,63,2539	0/0:8,0:8:21.07:0,21,939	0/0:9,0:9:27.08:0,27,1096	0/0:6,0:6:18.05:0,18,625	0/0:32,0:32:93.32:0,93,4158	0/0:21,0:21:60.21:0,60,2647	0/0:14,0:14:42.13:0,42,1767	1/1:7,33:39:96.29:2427,96,0	0/0:17,0:17:51.16:0,51,2172	0/0:22,0:22:66.22:0,66,2789	0/0:25,0:25:72.25:0,72,3131	0/0:20,0:20:57.20:0,57,2549	0/0:20,0:20:57.19:0,57,2422	0/0:10,0:10:30.10:0,30,1283	0/0:17,0:17:51.18:0,51,2209	0/0:30,0:30:90.30:0,90,3873	0/0:21,0:21:63.22:0,63,2814	0/0:9,0:9:27.09:0,27,1091	0/0:16,0:16:48.15:0,48,1900	0/0:34,0:34:99:0,99,4366	0/0:19,0:19:57.20:0,57,2549	0/0:19,0:19:57.20:0,57,2516	0/0:25,0:25:75.26:0,75,3297	0/0:7,0:7:21.07:0,21,938	0/0:19,0:19:57.20:0,57,2548	0/0:21,0:21:60.19:0,60,2414	0/0:33,0:33:99:0,99,4298	1/1:0,6:6:18.06:516,18,0
chr10	94255924	.	TAAAAAC	T	523.04	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=4.634;DP=577;FS=4.471;HRun=0;HaplotypeScore=119.2289;InbreedingCoeff=0.9800;MQ=71.33;MQ0=1;MQRankSum=-4.236;QD=20.12;ReadPosRankSum=-2.504;VQSLOD=2.8349;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:72.22:0,72,2276	0/0:7,0:7:18.06:0,18,597	0/0:18,0:16:19.91:0,20,353	0/0:19,0:11:20.90:0,21,302	0/0:33,0:33:75.26:0,75,2404	0/0:12,0:12:30.10:0,30,994	0/0:20,0:20:48.16:0,48,1560	1/1:16,10:26:30.10:617,30,0	0/0:22,0:22:57.18:0,57,1796	0/0:22,0:22:53.94:0,54,1611	0/0:22,0:22:45.14:0,45,1415	0/0:15,0:15:42.13:0,42,1318	0/0:18,0:18:42.14:0,42,1384	0/0:16,0:16:27.09:0,27,889	0/0:20,0:20:39.13:0,39,1293	0/0:19,0:19:48.16:0,48,1568	0/0:32,0:32:72.25:0,72,2248	0/0:34,0:34:78.24:0,78,2488	0/0:17,0:17:33.11:0,33,1045	0/0:22,0:22:60.21:0,60,1980	0/0:16,0:16:39.13:0,39,1244	0/0:16,0:16:33.11:0,33,1091	0/0:23,0:23:51.18:0,51,1687	0/0:14,0:14:36.12:0,36,1193	0/0:19,0:19:48.16:0,48,1489	0/0:28,0:28:66.22:0,66,2024	0/0:32,0:32:72.25:0,72,2356	./.
chr10	94256180	.	CTT	C	3833.91	PASS	AB=0.583;AC=17;AF=0.304;AN=56;BaseQRankSum=4.562;DP=446;FS=13.738;HRun=10;HaplotypeScore=91.9312;InbreedingCoeff=0.8516;MQ=69.00;MQ0=0;MQRankSum=-4.166;QD=27.58;ReadPosRankSum=-2.812;VQSLOD=1.6378;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:22:48.41:0,48,196	1/1:0,3:3:9.02:100,9,0	0/0:9,0:7:6.02:0,6,94	0/0:6,0:6:3.01:0,3,41	1/1:5,23:28:62.98:658,63,0	0/0:1,0:14:39.06:0,39,372	0/0:0,0:3:6.01:0,6,57	0/0:6,0:22:44.81:0,45,197	1/1:3,6:9:21.05:233,21,0	1/1:3,27:30:84.20:926,84,0	1/1:3,18:21:57.03:599,57,0	0/0:2,0:13:27.01:0,27,247	0/0:1,0:18:45.07:0,45,430	0/0:2,0:12:24.04:0,24,229	1/1:1,13:14:39.10:435,39,0	1/1:4,9:13:30.06:332,30,0	0/0:4,0:29:60.89:0,61,239	0/1:1,5:7:10.53:149,0,11	0/0:20,0:20:42.12:0,42,599	0/0:24,0:24:66.23:0,66,1046	0/0:13,0:13:24.08:0,24,381	0/0:0,0:8:24.04:0,24,229	0/0:2,0:18:46.32:0,46,433	0/0:2,0:15:30.05:0,30,286	1/1:2,12:14:36.08:401,36,0	0/0:27,0:27:75.26:0,75,1190	0/0:22,0:22:63.20:0,63,977	0/0:4,0:12:19.96:0,20,69
chr10	94256223	.	A	AT	5662.80	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-2.802;DP=525;FS=1.169;HRun=5;HaplotypeScore=81.7300;InbreedingCoeff=0.9862;MQ=65.92;MQ0=0;MQRankSum=-6.800;QD=32.92;ReadPosRankSum=1.842;VQSLOD=5.3667;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.19:0,75,806	1/1:0,7:7:21.07:276,21,0	0/0:7,0:7:18:0,18,168	0/0:3,0:3:7.83:0,8,69	1/1:2,36:38:87.19:1091,87,0	0/0:14,0:14:39.10:0,39,419	0/0:11,0:11:30.04:0,30,305	0/0:32,0:32:93.21:0,93,985	1/1:0,15:15:42.14:553,42,0	1/1:1,22:23:66.21:867,66,0	1/1:3,19:22:48.11:611,48,0	0/0:16,0:16:45.11:0,45,483	0/0:29,0:29:81.20:0,81,864	0/0:13,0:13:33.08:0,33,353	1/1:2,14:16:42.13:539,42,0	1/1:2,16:18:45.15:592,45,0	0/0:24,0:24:69.16:0,69,733	1/1:3,9:12:33.11:423,33,0	0/0:17,0:16:39.09:0,39,412	0/0:27,0:27:72.16:0,72,766	0/0:10,0:10:30.08:0,30,322	0/0:16,0:16:39.10:0,39,419	0/0:19,0:18:51.13:0,51,547	0/0:12,0:12:36.09:0,36,387	1/1:2,19:21:54.18:710,54,0	0/0:34,0:34:93.22:0,93,989	0/0:31,0:31:87.20:0,87,926	0/0:11,0:11:30.05:0,30,310
chr10	94256576	.	A	AG	1604.58	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.833;DP=742;FS=1.227;HRun=4;HaplotypeScore=91.7772;InbreedingCoeff=0.9998;MQ=90.88;MQ0=1;MQRankSum=-1.301;QD=27.67;ReadPosRankSum=-2.708;VQSLOD=1.8839;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.22:0,78,884	0/0:12,0:12:36.10:0,36,408	0/0:31,0:31:75.17:0,75,827	0/0:30,0:30:78.14:0,78,841	0/0:31,0:31:78.22:0,78,884	0/0:19,0:19:57.15:0,57,639	0/0:29,0:29:84.24:0,84,953	1/1:9,30:39:87.26:1155,87,0	0/0:20,0:20:54.14:0,54,603	0/0:20,0:20:51.13:0,51,568	0/0:21,0:21:51.14:0,51,577	0/0:24,0:24:66.19:0,66,749	0/0:33,0:33:96.25:0,96,1070	0/0:27,0:27:75.21:0,75,851	0/0:32,0:32:93.25:0,93,1043	0/0:20,0:20:60.13:0,60,666	0/0:19,0:19:54.15:0,54,612	0/0:13,0:13:33.09:0,33,374	0/0:33,0:33:93.25:0,93,1042	0/0:34,0:34:99:0,99,1112	0/0:39,0:38:99:0,105,1180	0/0:22,0:22:66.17:0,66,739	0/0:24,0:24:63.18:0,63,714	0/0:28,0:28:81.23:0,81,919	0/0:24,0:24:69.18:0,69,768	0/0:34,0:34:96.27:0,96,1089	0/0:36,0:36:99:0,102,1147	1/1:1,18:19:42.14:571,42,0
chr10	94256786	.	G	GCT	862.76	PASS	AC=18;AF=0.333;AN=54;BaseQRankSum=8.300;DP=490;FS=8.079;HRun=0;HaplotypeScore=82.6323;InbreedingCoeff=0.8895;MQ=64.50;MQ0=2;MQRankSum=-6.962;QD=7.44;ReadPosRankSum=-0.905;VQSLOD=1.7875;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.22:0,72,1032	1/1:6,0:6:3.01:37,3,0	0/0:28,0:17:44.30:0,44,545	0/0:19,0:11:23.60:0,24,290	1/1:14,0:14:3.01:39,3,0	0/0:28,0:28:78.25:0,78,1129	0/0:23,0:23:63.20:0,63,908	0/0:26,0:26:58.29:0,58,486	1/1:13,0:13:9.03:112,9,0	1/1:1,10:11:18.34:156,18,0	1/1:18,0:18:9.01:103,9,0	0/0:15,0:15:42.14:0,42,619	0/0:21,0:21:57.17:0,57,817	0/0:12,0:12:33.10:0,33,466	1/1:13,0:13:9.03:110,9,0	1/1:11,0:10:15.05:180,15,0	0/0:20,0:20:48.14:0,48,684	1/1:13,0:13:16.50:242,16,0	0/0:19,0:18:54.17:0,54,777	0/0:19,0:19:51.17:0,51,750	0/0:12,0:12:24.07:0,24,334	0/0:15,0:15:42.14:0,42,619	0/0:15,0:15:42.14:0,42,618	0/0:17,0:17:51.17:0,51,751	1/1:16,0:16:6.02:74,6,0	0/0:26,0:26:78.26:0,78,1147	0/0:30,0:30:90.30:0,90,1325	./.
chr10	94256787	.	C	CTCTGTGTGTGTGTG	5785.12	PASS	AB=1.000;AC=19;AF=0.352;AN=54;BaseQRankSum=5.522;DP=535;FS=0.516;HRun=0;HaplotypeScore=204.3436;InbreedingCoeff=0.8046;MQ=62.11;MQ0=2;MQRankSum=-9.260;QD=30.94;ReadPosRankSum=-3.896;VQSLOD=3.1097;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.22:0,72,2629	1/1:2,3:7:2.96:212,3,0	0/0:30,0:17:42.34:0,42,1190	0/0:16,0:11:26.25:0,26,472	1/1:4,7:18:2.43:162,2,0	0/0:27,0:27:81.25:0,81,2846	0/0:23,0:23:63:0,63,2161	0/1:36,0:35:67.31:587,0,67	1/1:5,11:18:9.03:636,9,0	1/1:15,0:14:25.62:807,26,0	1/1:21,0:21:8.51:126,9,0	0/0:15,0:15:45.14:0,45,1602	0/0:20,0:20:57.20:0,57,2040	0/0:12,0:12:33.11:0,33,1258	1/1:6,10:20:7.31:631,7,0	1/1:4,10:14:21.07:1373,21,0	0/0:19,0:19:48.16:0,48,1531	1/1:16,0:15:38.89:828,39,0	0/0:19,0:18:54.18:0,54,1804	0/0:19,0:19:51.17:0,51,1847	0/0:12,0:12:27.06:0,27,810	0/0:15,0:15:42.62:0,43,1630	0/0:15,0:15:42.14:0,42,1594	0/0:17,0:17:51.18:0,51,2077	1/1:6,12:20:5.54:423,6,0	0/0:27,0:27:47.63:0,48,2797	0/0:30,0:30:90.31:0,90,3265	./.
chr10	94256798	.	CGT	C	274.87	PASS	AB=0.935;AC=7;AF=0.130;AN=54;BaseQRankSum=3.096;DP=548;FS=7.973;HRun=0;HaplotypeScore=100.6951;InbreedingCoeff=0.1879;MQ=58.27;MQ0=5;MQRankSum=0.636;QD=2.62;ReadPosRankSum=0.825;VQSLOD=1.5961;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:50.09:0,50,776	0/0:6,0:6:3:0,3,26	0/0:41,0:20:24:0,24,333	0/0:29,0:14:11.13:0,11,227	0/1:12,0:12:3.12:3,0,18	0/0:28,0:28:72.24:0,72,1139	0/0:25,0:25:51.64:0,52,803	0/0:27,0:26:43.84:0,44,531	0/0:19,0:19:17.95:0,18,160	0/0:11,0:10:11.97:0,12,137	0/0:20,0:20:2.98:0,3,22	0/0:19,0:19:51.13:0,51,783	0/0:22,0:22:63.21:0,63,988	0/0:12,0:12:24.02:0,24,385	0/0:18,0:18:11.95:0,12,103	0/0:14,0:13:15.47:0,15,132	1/1:3,15:18:30.09:362,30,0	0/0:18,0:17:17.99:0,18,184	0/1:17,1:17:0.09:0,0,453	0/0:16,2:18:2.92:0,3,495	0/1:11,2:13:0.06:0,0,473	0/0:15,0:15:33.06:0,33,492	0/0:15,1:16:2.95:0,3,532	0/1:21,4:25:12.16:12,0,760	0/1:19,0:18:2.45:2,0,65	0/0:23,1:24:11.88:0,12,629	0/0:31,0:31:75.26:0,75,1197	./.
chr10	94258751	.	A	AC	1192.12	PASS	AB=0.917;AC=5;AF=0.089;AN=56;BaseQRankSum=8.114;DP=677;FS=4.487;HRun=1;HaplotypeScore=68.0659;InbreedingCoeff=0.7655;MQ=75.92;MQ0=0;MQRankSum=-3.081;QD=27.09;ReadPosRankSum=-2.769;VQSLOD=2.6922;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:96.31:0,96,1246	0/0:6,0:6:15.05:0,15,195	0/0:17,0:17:51.16:0,51,652	0/0:23,0:23:65.52:0,66,786	0/0:31,0:31:87.27:0,87,1116	0/0:17,0:17:48.16:0,48,623	0/0:25,0:25:75.23:0,75,960	1/1:2,27:27:75.25:1122,75,0	0/0:31,0:31:90.28:0,90,1150	0/0:26,0:26:78.25:0,78,1012	0/0:19,0:19:57.19:0,57,739	0/0:19,0:19:57.19:0,57,740	0/0:24,0:24:72.23:0,72,934	0/0:23,0:23:66.20:0,66,838	0/0:41,0:41:99:0,120,1527	0/0:32,0:32:93.29:0,93,1193	0/0:36,0:36:96.24:0,96,1197	0/1:10,1:11:14.64:15,0,249	0/0:25,0:25:72.23:0,72,935	0/0:27,0:27:78.25:0,78,1012	0/0:48,0:48:99:0,141,1817	0/0:17,0:17:48.14:0,48,609	0/0:21,0:21:57.18:0,57,740	0/0:27,0:27:81.26:0,81,1051	0/0:14,0:14:39.13:0,39,506	0/0:31,0:31:93.29:0,93,1194	0/0:18,0:18:54.18:0,54,701	1/1:0,4:4:12.04:180,12,0
chr10	94259752	.	CT	C	4963.44	PASS	AB=0.929;AC=17;AF=0.304;AN=56;BaseQRankSum=-2.813;DP=580;FS=1.111;HRun=6;HaplotypeScore=77.0359;InbreedingCoeff=0.9084;MQ=65.93;MQ0=0;MQRankSum=1.685;QD=26.98;ReadPosRankSum=2.695;VQSLOD=5.4045;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:33.11:0,33,432	0/0:9,0:9:21.07:0,21,276	0/0:12,0:12:35.69:0,36,369	0/1:12,1:13:12.84:13,0,186	0/0:28,0:28:81.24:0,81,1036	1/1:1,23:24:60.15:645,60,0	1/1:2,13:16:36.98:388,37,0	0/0:29,0:20:51.13:0,51,624	0/0:20,0:20:54.14:0,54,661	0/0:25,0:25:72.22:0,72,920	0/0:32,0:32:90.28:0,90,1158	1/1:0,24:24:66.17:709,66,0	1/1:1,30:31:84.21:902,84,0	1/1:0,29:29:81.20:870,81,0	0/0:19,0:19:48.16:0,48,632	0/0:24,0:24:69.22:0,69,908	0/0:16,0:16:48.11:0,48,598	0/0:4,0:4:9.03:0,9,118	0/0:30,0:29:78.24:0,78,998	0/0:35,0:35:99:0,102,1298	0/0:15,0:15:42.11:0,42,522	1/1:0,20:20:60.15:645,60,0	1/1:1,16:17:48.06:501,48,0	1/1:1,9:10:27.07:290,27,0	0/0:28,0:28:84.25:0,84,1076	0/0:27,0:27:69.20:0,69,880	0/0:24,0:24:69.18:0,69,854	0/0:6,0:6:18.03:0,18,204
chr10	94260223	.	GT	G	713.81	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.878;DP=585;FS=3.528;HRun=6;HaplotypeScore=77.2805;InbreedingCoeff=0.9648;MQ=66.74;MQ0=1;MQRankSum=-0.146;QD=20.39;ReadPosRankSum=-2.090;VQSLOD=2.7677;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:41.92:0,42,545	0/0:6,0:6:18.06:0,18,237	0/0:26,0:21:9.92:0,10,406	0/0:24,0:21:22.04:0,22,508	0/0:27,0:27:78.25:0,78,1024	0/0:37,0:37:99:0,99,1283	0/0:21,0:21:54.18:0,54,709	1/1:5,20:25:58.92:633,59,0	0/0:20,0:20:54.17:0,54,696	0/0:29,0:29:84.27:0,84,1102	0/0:32,0:32:93.27:0,93,1191	0/0:20,0:20:57.16:0,57,720	0/0:19,0:19:45.15:0,45,591	0/0:18,0:18:48.14:0,48,603	0/0:20,0:20:57.19:0,57,747	0/0:18,0:18:48.16:0,48,632	0/0:10,0:10:27.09:0,27,355	0/0:18,0:17:39.05:0,39,472	0/0:24,0:23:60.19:0,60,788	0/0:24,0:24:66.21:0,66,869	0/0:19,0:19:54.18:0,54,710	0/0:21,0:21:63.18:0,63,797	0/0:21,0:21:63.19:0,63,810	0/0:12,0:12:33.11:0,33,434	0/0:20,0:20:57.18:0,57,737	0/0:20,0:20:51.17:0,51,671	0/0:28,0:28:84.24:0,84,1072	1/1:4,6:10:17.61:201,18,0
chr10	94260832	.	AT	A	6387.08	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=13.509;DP=579;FS=1.048;HRun=8;HaplotypeScore=58.2465;InbreedingCoeff=0.9593;MQ=58.60;MQ0=6;MQRankSum=-2.104;QD=24.66;ReadPosRankSum=1.212;VQSLOD=5.5529;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:24.03:0,24,273	1/1:0,10:10:30.05:290,30,0	0/0:11,0:4:2.05:0,2,54	0/0:11,1:7:7.89:0,8,97	1/1:2,24:26:60.05:571,60,0	0/0:21,0:21:60.18:0,60,714	0/0:15,0:15:39.12:0,39,471	1/1:5,19:19:42.02:397,42,0	1/1:2,18:20:51.08:492,51,0	1/1:4,26:30:72.10:691,72,0	1/1:1,22:23:66.02:625,66,0	0/0:15,0:15:42.13:0,42,507	0/0:22,0:22:63.19:0,63,760	0/0:21,0:21:57.16:0,57,677	1/1:2,32:34:93.15:898,93,0	1/1:1,14:15:42.07:405,42,0	0/0:22,0:21:57.17:0,57,685	1/1:1,28:29:78.07:744,78,0	0/0:19,0:15:42.12:0,42,498	0/0:26,0:26:63.17:0,63,738	0/0:11,0:11:27.08:0,27,326	0/0:22,0:22:54.17:0,54,652	0/0:31,0:31:84.25:0,84,1005	0/0:6,0:6:18.06:0,18,217	1/1:0,25:25:75.12:724,75,0	0/0:19,1:20:31.20:0,31,659	0/0:34,0:34:90.28:0,90,1086	1/1:4,19:22:57.09:550,57,0
chr10	94260988	.	TG	T	278.78	PASS	AB=0.813;AC=2;AF=0.037;AN=54;BaseQRankSum=6.636;DP=599;FS=2.112;HRun=3;HaplotypeScore=54.3432;InbreedingCoeff=0.2283;MQ=56.65;MQ0=7;MQRankSum=-6.668;QD=6.20;ReadPosRankSum=-1.206;VQSLOD=0.0987;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:18.06:0,18,259	0/0:9,0:9:27.09:0,27,389	./.	0/1:11,1:1:0:0,0,0	0/0:29,0:29:87.29:0,87,1253	0/0:18,0:18:54.18:0,54,778	0/0:16,1:17:14.05:0,14,654	0/1:19,14:31:99:353,0,689	0/0:19,0:19:57.16:0,57,784	0/0:26,0:26:75.25:0,75,1068	0/0:23,0:23:66.22:0,66,951	0/0:23,0:23:69.22:0,69,966	0/0:16,0:16:45.15:0,45,647	0/0:25,0:25:69.23:0,69,992	0/0:31,0:31:90.29:0,90,1278	0/0:14,0:14:42.14:0,42,605	0/0:28,0:28:81.23:0,81,1136	0/0:30,0:30:80.85:0,81,1139	0/0:16,2:15:1.95:0,2,481	0/0:40,0:40:99:0,111,1599	0/0:19,0:19:57.18:0,57,802	0/0:20,0:20:60.19:0,60,846	0/0:26,0:26:78.25:0,78,1105	0/0:11,0:11:33.10:0,33,457	0/0:33,0:33:99:0,99,1424	0/0:26,2:28:9.93:0,10,1032	0/0:27,0:27:81.27:0,81,1166	0/0:7,0:7:21.07:0,21,302
chr10	94263355	.	AC	A	556.04	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.494;DP=604;FS=8.399;HRun=1;HaplotypeScore=114.0067;InbreedingCoeff=0.9532;MQ=89.37;MQ0=0;MQRankSum=-4.933;QD=30.89;ReadPosRankSum=-3.745;VQSLOD=1.6701;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,154,2418	0/0:4,0:4:12:0,12,163	0/0:19,0:19:54.07:0,54,728	0/0:26,0:26:70.79:0,71,1093	0/0:20,0:19:51.16:0,51,788	0/0:15,0:15:45.11:0,45,690	0/0:19,0:19:57.19:0,57,910	1/1:0,15:15:42.07:545,42,0	0/0:21,0:21:63.21:0,63,1004	0/0:24,0:24:72.24:0,72,1130	0/0:16,0:16:48.16:0,48,766	0/0:20,0:20:60.20:0,60,951	0/0:26,0:26:78.25:0,78,1221	0/0:13,0:13:39.12:0,39,599	0/0:32,0:32:96.33:0,96,1530	0/0:21,0:21:63.21:0,63,1004	0/0:34,0:34:99:0,102,1627	0/0:12,0:12:33.09:0,33,501	0/0:16,0:16:48.09:0,48,713	0/0:27,0:27:78.26:0,78,1223	0/0:44,0:44:99:0,132,2094	0/0:13,0:13:39.13:0,39,621	0/0:22,0:22:63.17:0,63,976	0/0:26,0:26:78.24:0,78,1207	0/0:12,0:12:36.12:0,36,574	0/0:18,0:18:54.13:0,54,811	0/0:34,0:34:99:0,102,1626	1/1:0,3:3:9.03:126,9,0
chr10	94264297	.	A	AT	1064.47	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.380;DP=600;FS=0.000;HRun=7;HaplotypeScore=62.6969;InbreedingCoeff=0.9981;MQ=77.26;MQ0=0;MQRankSum=-1.191;QD=29.57;ReadPosRankSum=0.160;VQSLOD=3.9495;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,33:36:96.29:1159,96,0	0/0:16,0:16:48.05:0,48,456	0/0:21,0:21:51.35:0,51,466	0/0:13,0:13:28.62:0,29,277	0/0:28,0:27:66.08:0,66,629	0/0:28,0:28:75.12:0,75,724	0/0:17,0:17:48.07:0,48,464	0/0:30,0:30:72.01:0,72,676	0/0:21,0:21:60.09:0,60,575	0/0:33,0:33:92.94:0,93,882	0/0:22,0:22:54.08:0,54,521	0/0:16,0:16:42.07:0,42,406	0/0:19,0:19:57.08:0,57,544	0/0:22,0:22:60.08:0,60,575	0/0:25,0:25:72.08:0,72,680	0/0:17,0:17:51.07:0,51,487	0/0:12,0:12:30.03:0,30,289	0/0:14,0:14:33.05:0,33,319	0/0:21,0:21:51.07:0,51,488	0/0:25,1:26:38.86:0,39,654	0/0:16,0:16:48.08:0,48,464	0/0:21,0:21:60.10:0,60,579	0/0:24,0:24:60.09:0,60,579	0/0:12,0:12:36.06:0,36,348	0/0:18,0:18:54.09:0,54,521	0/0:28,0:28:75.11:0,75,720	0/0:27,0:26:69.11:0,69,666	0/0:17,0:17:36.05:0,36,347
chr10	94264419	.	A	AAGT	581.80	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.374;DP=492;FS=3.384;HRun=0;HaplotypeScore=100.9806;InbreedingCoeff=0.7652;MQ=84.19;MQ0=0;MQRankSum=-6.274;QD=23.27;ReadPosRankSum=-2.942;VQSLOD=3.1407;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.19:0,63,1061	0/0:8,0:8:21.07:0,21,349	0/0:25,0:24:59.81:0,60,953	0/0:20,0:20:47.68:0,48,738	0/0:29,0:29:87.30:0,87,1466	0/0:22,0:22:66.22:0,66,1079	0/0:17,0:17:51.05:0,51,804	1/1:12,10:22:0.98:578,1,0	0/0:17,0:17:45.03:0,45,714	0/0:17,0:17:48.06:0,48,743	0/0:18,0:18:51.17:0,51,861	0/0:14,0:14:39.13:0,39,651	0/0:16,0:16:48.13:0,48,779	0/0:16,0:16:48.16:0,48,806	0/0:17,0:17:42.14:0,42,713	0/0:13,0:13:39.13:0,39,654	0/0:14,0:14:36.12:0,36,607	0/0:5,0:5:8.98:0,9,121	0/0:24,0:24:66.23:0,66,1165	0/0:26,0:26:78.25:0,78,1348	0/0:16,0:16:48.16:0,48,839	0/0:20,0:20:57.19:0,57,953	0/0:20,0:20:54.18:0,54,901	0/0:11,0:11:33.11:0,33,560	0/0:14,0:14:36.06:0,36,582	0/0:22,0:22:60.20:0,60,1034	0/0:24,0:24:72.25:0,72,1258	1/1:2,1:3:6.02:99,6,0
chr10	94264574	.	C	CT	1679.49	PASS	AB=0.819;AC=22;AF=0.393;AN=56;BaseQRankSum=1.132;DP=459;FS=0.492;HRun=11;HaplotypeScore=72.1323;InbreedingCoeff=0.6476;MQ=66.78;MQ0=7;MQRankSum=0.150;QD=9.38;ReadPosRankSum=-0.625;VQSLOD=2.5359;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:26:44.59:0,45,128	0/0:6,0:8:19.97:0,20,145	0/0:18,0:11:10.22:0,10,62	0/1:12,0:9:16.12:16,0,16	0/0:19,0:19:29.55:0,30,219	1/1:3,14:17:15.84:342,16,0	0/1:4,10:15:19.57:170,0,20	1/1:15,0:15:4.26:23,4,0	0/0:13,0:13:32.87:0,33,255	0/0:16,0:15:34.90:0,35,261	0/0:19,0:19:44.79:0,45,349	1/1:2,5:7:12.02:119,12,0	0/1:10,5:15:64.54:125,0,65	1/1:4,8:12:18.04:183,18,0	0/0:12,0:14:36.89:0,37,265	0/0:17,0:17:47.82:0,48,371	1/1:17,0:16:7.99:45,8,0	0/0:9,0:11:21.99:0,22,151	0/0:24,1:24:26.31:0,26,387	0/0:31,0:31:24.46:0,24,479	0/0:6,0:6:14.94:0,15,116	1/1:2,8:10:21.04:213,21,0	1/1:5,12:17:12.83:311,13,0	1/1:1,12:13:30.06:304,30,0	0/1:16,1:18:4.98:5,0,274	0/0:19,0:18:35.81:0,36,279	0/0:33,0:34:75.70:0,76,601	1/1:6,0:6:5.42:23,5,0
chr10	94264575	.	T	TTTCTTTCTTTC	1324.75	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=1.189;DP=461;FS=0.842;HRun=0;HaplotypeScore=160.2370;InbreedingCoeff=0.8008;MQ=65.57;MQ0=8;MQRankSum=-6.385;QD=25.48;ReadPosRankSum=-1.711;VQSLOD=3.0289;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:44.76:0,45,1656	0/1:8,0:8:3.55:4,0,546	0/0:19,0:10:18.17:0,18,361	0/0:14,0:9:21.01:0,21,356	0/0:18,0:18:32.75:0,33,818	0/0:16,0:16:41.88:0,42,957	0/0:15,0:15:27.09:0,27,689	1/1:17,0:14:32.89:526,33,0	0/0:13,0:13:36.11:0,36,1089	0/0:17,0:15:45.11:0,45,922	0/0:20,0:20:51.16:0,51,1437	0/0:7,0:7:17.53:0,18,262	0/0:15,0:15:38.82:0,39,797	0/0:12,0:12:32.52:0,33,487	0/0:14,0:14:15.37:0,15,928	0/0:16,0:16:48.16:0,48,1455	1/1:7,9:20:7.56:639,8,0	0/0:11,0:11:30.09:0,30,879	0/0:26,0:24:69.22:0,69,1766	0/0:30,0:30:83.94:0,84,1931	0/0:6,0:6:18.06:0,18,513	0/0:10,0:10:27.04:0,27,543	0/0:17,0:17:41.35:0,41,780	0/0:13,0:13:32.57:0,33,605	0/0:20,0:20:48.15:0,48,1186	0/0:20,0:18:45.05:0,45,1306	0/0:35,0:34:97.43:0,97,2451	1/1:6,0:6:6.02:286,6,0
chr10	94264576	.	T	TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC	2000.79	PASS	AB=0.941;AC=5;AF=0.089;AN=56;BaseQRankSum=-0.119;DP=466;FS=0.892;HRun=0;HaplotypeScore=315.0282;InbreedingCoeff=0.7681;MQ=65.22;MQ0=9;MQRankSum=-6.790;QD=46.53;ReadPosRankSum=-0.643;VQSLOD=1.9945;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:68.45:0,68,4111	0/0:9,0:9:20.43:0,20,1258	0/0:21,0:10:29.62:0,30,418	0/0:14,0:9:21.01:0,21,451	0/0:17,0:17:32.69:0,33,1539	0/0:16,0:16:41.81:0,42,2229	0/0:15,0:15:27.09:0,27,1538	1/1:14,0:15:39.06:1134,39,0	0/0:13,0:13:36.11:0,36,1976	0/0:17,0:15:45.13:0,45,1508	0/0:20,0:20:52.05:0,52,2467	0/0:7,0:7:17.32:0,17,532	0/0:15,0:15:38.75:0,39,1609	0/0:13,0:13:32.39:0,32,831	0/0:15,0:15:39.38:0,39,1798	0/0:16,0:16:48.16:0,48,2904	0/1:15,0:15:6.21:161,0,6	0/0:11,0:11:30.98:0,31,1689	0/0:26,0:24:69.24:0,69,2939	0/0:30,0:30:83.93:0,84,3390	0/0:7,0:6:18.06:0,18,1027	0/0:11,0:11:27.01:0,27,965	0/0:17,0:17:41.06:0,41,1479	0/0:13,0:13:32.44:0,32,1457	0/0:19,0:19:54.16:0,54,2313	0/0:20,0:18:51.09:0,51,2511	0/0:35,0:34:99:0,99,4652	1/1:0,2:9:6.02:826,6,0
chr10	94264586	.	C	CT	99.09	PASS	AB=0.870;AC=2;AF=0.036;AN=56;BaseQRankSum=3.095;DP=465;FS=3.812;HRun=11;HaplotypeScore=75.5680;InbreedingCoeff=-0.0400;MQ=57.27;MQ0=23;MQRankSum=-2.589;QD=3.20;ReadPosRankSum=-2.297;VQSLOD=-0.2964;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.23:0,75,944	0/0:9,0:9:24.08:0,24,327	0/0:23,0:6:11.38:0,11,108	0/1:14,0:4:10.29:10,0,27	0/0:20,0:20:35.76:0,36,496	0/0:15,0:15:40.36:0,40,297	0/0:16,0:16:30.24:0,30,270	0/1:11,6:14:99:172,0,235	0/0:13,0:13:33.11:0,33,451	0/0:15,0:13:39.12:0,39,531	0/0:19,0:19:54.15:0,54,718	0/0:9,0:9:17.45:0,17,157	0/0:14,0:14:32.68:0,33,337	0/0:10,0:10:26.85:0,27,236	0/0:17,0:17:45.10:0,45,621	0/0:19,0:19:54.18:0,54,753	0/0:15,0:14:27.01:0,27,297	0/0:9,0:9:24.07:0,24,330	0/0:27,0:23:66.21:0,66,896	0/0:26,0:26:75.10:0,75,999	0/0:6,0:5:15.05:0,15,210	0/0:14,0:14:32.33:0,32,290	0/0:15,0:15:36.22:0,36,255	0/0:17,0:17:43.32:0,43,363	0/0:19,0:19:54.14:0,54,731	0/0:20,0:18:51.17:0,51,710	0/0:33,0:32:93.30:0,93,1275	0/0:5,0:5:6:0,6,51
chr10	94265564	.	GT	G	292.08	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.163;DP=613;FS=11.303;HRun=5;HaplotypeScore=59.2573;InbreedingCoeff=0.9488;MQ=55.76;MQ0=9;MQRankSum=-5.677;QD=12.70;ReadPosRankSum=-1.167;VQSLOD=1.0429;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:14:21.07:0,21,286	0/0:11,0:11:30.10:0,30,410	0/0:20,0:9:21.07:0,21,274	0/0:19,0:5:9.02:0,9,108	0/0:25,0:25:72.24:0,72,975	0/0:19,0:19:36.12:0,36,492	0/0:16,0:15:36.08:0,36,461	1/1:0,16:8:24.07:272,24,0	0/0:21,0:21:51.17:0,51,694	0/0:27,0:27:72.24:0,72,982	0/0:21,0:21:63.21:0,63,859	0/0:22,0:22:57.19:0,57,779	0/0:12,0:12:33.11:0,33,450	0/0:27,0:27:78.20:0,78,1021	0/0:27,0:27:78.16:0,78,1008	0/0:13,0:13:33.11:0,33,450	0/0:30,0:30:75.25:0,75,1020	0/0:16,0:16:33.11:0,33,450	0/0:19,0:15:42.14:0,42,574	0/0:28,0:28:81.27:0,81,1105	0/0:35,0:35:96.30:0,96,1282	0/0:28,0:28:78.04:0,78,1067	0/0:28,0:28:75.24:0,75,1004	0/0:12,0:12:33.11:0,33,448	0/0:25,0:25:69.22:0,69,924	0/0:25,0:25:69.22:0,69,928	0/0:36,0:36:99:0,99,1308	1/1:0,7:6:12.03:136,12,0
chr10	94265850	.	A	AT	289.89	PASS	AB=0.609;AC=3;AF=0.054;AN=56;BaseQRankSum=2.179;DP=608;FS=10.536;HRun=8;HaplotypeScore=54.7913;InbreedingCoeff=0.5532;MQ=54.28;MQ0=32;MQRankSum=-4.466;QD=13.18;ReadPosRankSum=1.429;VQSLOD=1.9734;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:54.02:0,54,494	0/0:10,0:9:21.01:0,21,192	0/0:11,0:5:11.19:0,11,89	0/0:14,0:4:2.77:0,3,27	0/0:31,0:26:60.01:0,60,544	0/0:26,0:25:66.04:0,66,604	0/0:10,0:8:18.01:0,18,165	0/1:5,9:7:21.43:152,0,21	0/0:24,0:23:47.98:0,48,430	0/0:22,0:22:56.05:0,56,495	0/0:25,0:23:54.03:0,54,494	0/0:16,0:16:48.01:0,48,435	0/0:24,0:23:47.91:0,48,439	0/0:18,0:18:24.38:0,24,388	0/0:22,0:22:53.97:0,54,479	0/0:17,0:16:48.02:0,48,439	0/0:27,0:27:50.05:0,50,445	0/0:21,0:15:33.02:0,33,302	0/0:24,0:19:39.01:0,39,357	0/0:32,0:26:44.96:0,45,403	0/0:23,0:23:54.02:0,54,494	0/0:29,0:24:54.02:0,54,490	0/0:25,0:19:33.02:0,33,302	0/0:20,0:20:39.01:0,39,357	0/0:21,0:18:39.02:0,39,357	0/0:24,0:23:66.02:0,66,599	0/0:39,0:39:86.93:0,87,790	1/1:0,8:8:21.06:242,21,0
chr10	94266063	.	TC	T	683.07	PASS	AC=2;AF=0.040;AN=50;BaseQRankSum=5.448;DP=590;FS=0.863;HRun=2;HaplotypeScore=56.2742;InbreedingCoeff=0.8751;MQ=54.86;MQ0=34;MQRankSum=-2.911;QD=24.40;ReadPosRankSum=-0.882;VQSLOD=3.1762;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:18,0:18:51.14:0,51,740	0/0:26,0:3:6.02:0,6,76	0/0:31,0:4:11.64:0,12,103	0/0:38,0:38:99:0,102,1502	0/0:33,0:32:72.24:0,72,1077	0/0:28,0:28:69.18:0,69,970	./.	0/0:23,0:23:60.18:0,60,859	0/0:30,0:29:84.28:0,84,1241	0/0:29,0:28:69.22:0,69,1014	0/0:11,0:11:24.07:0,24,338	0/0:12,0:12:36.12:0,36,539	0/0:21,0:21:45.11:0,45,649	0/0:21,0:21:54.07:0,54,802	0/0:18,0:18:45.14:0,45,648	1/1:1,27:28:60.19:777,60,0	0/0:16,0:16:30.10:0,30,444	0/0:16,0:10:30.10:0,30,450	0/0:30,0:30:84.28:0,84,1258	0/0:21,0:21:63.21:0,63,944	0/0:24,0:22:57.14:0,57,827	0/0:22,0:21:36.12:0,36,536	0/0:26,0:26:78.22:0,78,1107	0/0:17,0:17:48.16:0,48,719	0/0:25,0:25:75.21:0,75,1062	0/0:26,0:26:63.15:0,63,917	./.
chr10	94266429	.	AT	A	466.85	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.608;DP=657;FS=28.307;HRun=2;HaplotypeScore=79.2359;InbreedingCoeff=0.9934;MQ=49.68;MQ0=17;MQRankSum=-3.214;QD=21.22;ReadPosRankSum=-0.708;VQSLOD=1.9225;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:39.13:0,39,583	0/0:14,0:14:36.11:0,36,521	0/0:30,0:9:24.08:0,24,359	0/0:16,0:7:21.02:0,21,269	0/0:30,0:30:81.21:0,81,1184	0/0:23,0:22:57.19:0,57,853	0/0:23,0:21:51.16:0,51,735	1/1:3,10:8:21.07:270,21,0	0/0:26,0:26:69.22:0,69,1013	0/0:26,0:25:75.25:0,75,1104	0/0:33,0:32:90.21:0,90,1277	0/0:25,0:24:60.19:0,60,861	0/0:25,0:25:63.21:0,63,937	0/0:17,0:17:29.83:0,30,431	0/0:32,0:32:81.27:0,81,1194	0/0:31,0:31:75.25:0,75,1123	0/0:24,0:24:51.15:0,51,741	0/0:21,0:20:45.15:0,45,674	0/0:18,0:10:30.09:0,30,433	0/0:33,0:33:96.29:0,96,1365	0/0:32,0:32:96.31:0,96,1419	0/0:28,0:27:57.19:0,57,852	0/0:32,0:32:66.22:0,66,986	0/0:13,0:13:33.09:0,33,469	0/0:19,0:18:54.15:0,54,785	0/0:19,0:19:57.19:0,57,853	0/0:27,0:26:66.19:0,66,930	1/1:2,7:9:27.03:317,27,0
chr10	94266482	.	T	TA	1712.81	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.815;DP=672;FS=5.432;HRun=1;HaplotypeScore=78.2838;InbreedingCoeff=0.9738;MQ=55.63;MQ0=17;MQRankSum=-2.113;QD=32.32;ReadPosRankSum=-3.120;VQSLOD=2.3343;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:60.15:860,60,0	0/0:19,0:19:48.16:0,48,622	0/0:16,0:10:17.15:0,17,208	0/0:12,0:8:20.85:0,21,234	0/0:34,0:33:87.18:0,87,1089	0/0:32,0:31:84.15:0,84,1021	0/0:24,0:24:35.22:0,35,499	1/1:2,23:23:66.10:857,66,0	0/0:20,0:20:51.17:0,51,661	0/0:25,0:24:72.22:0,72,920	0/0:32,0:30:84.17:0,84,1064	0/0:26,0:26:51.09:0,51,624	0/0:25,0:25:57.16:0,57,709	0/0:20,0:20:48.12:0,48,582	0/0:32,0:32:81.19:0,81,1026	0/0:22,0:22:54.13:0,54,681	0/0:29,0:29:78.22:0,78,970	0/0:22,0:21:51.13:0,51,630	0/0:30,0:17:48.16:0,48,622	0/0:29,0:29:84.21:0,84,1043	0/0:29,0:29:87.28:0,87,1128	0/0:25,0:25:57.07:0,57,684	0/0:31,0:30:60.15:0,60,757	0/0:16,0:16:45.11:0,45,553	0/0:18,0:17:45.13:0,45,568	0/0:21,0:20:57.17:0,57,726	0/0:30,0:29:75.19:0,75,936	1/1:0,4:3:9.03:133,9,0
chr10	94268709	.	G	GT	1361.89	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=-8.060;DP=544;FS=6.917;HRun=12;HaplotypeScore=84.6235;InbreedingCoeff=0.6945;MQ=54.54;MQ0=17;MQRankSum=1.401;QD=11.54;ReadPosRankSum=-0.359;VQSLOD=3.0908;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:2:2.04:0,2,6	0/0:14,0:14:28.86:0,29,203	0/0:23,0:7:8.11:0,8,64	0/0:13,0:2:2.97:0,3,21	0/0:27,1:30:44.20:0,44,461	0/0:29,0:27:38.71:0,39,278	0/0:13,0:14:21.81:0,22,156	0/1:8,0:7:10.75:11,0,16	0/0:21,0:21:29.71:0,30,219	0/0:29,1:30:30.35:0,30,386	0/0:26,0:27:55.63:0,56,400	0/0:15,0:16:20.69:0,21,147	0/0:16,0:15:29.82:0,30,218	0/0:25,0:25:36.26:0,36,263	0/0:25,0:25:56.56:0,57,410	0/0:11,0:11:11.93:0,12,88	0/1:11,0:12:4.97:51,0,5	0/0:19,0:19:38.73:0,39,284	1/1:8,5:9:20.54:171,21,0	1/1:6,11:17:5.05:193,5,0	1/1:3,9:11:24.04:234,24,0	0/0:19,0:18:27.27:0,27,194	0/0:29,0:29:50.65:0,51,367	0/0:28,0:30:49.23:0,49,336	0/0:19,2:23:13.58:0,14,241	1/1:11,19:28:50.87:465,51,0	1/1:2,22:24:42.07:409,42,0	0/0:1,0:1:2.04:0,2,6
chr10	94268941	.	GCT	G	2072.85	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.639;DP=647;FS=2.614;HRun=0;HaplotypeScore=61.0022;InbreedingCoeff=0.9257;MQ=45.57;MQ0=83;MQRankSum=-9.325;QD=23.03;ReadPosRankSum=1.097;VQSLOD=3.9057;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:23:27.09:0,27,497	0/0:15,0:15:42.14:0,42,786	0/0:78,0:5:9.01:0,9,109	0/0:64,0:5:12.02:0,12,188	0/0:26,0:26:57.19:0,57,1063	0/0:16,0:12:24.08:0,24,449	0/0:19,0:16:27.05:0,27,468	0/0:17,0:4:12.04:0,12,225	0/0:20,0:20:57.20:0,57,1060	0/0:19,1:20:13.08:0,13,964	0/0:21,0:20:54.19:0,54,1000	0/0:14,0:13:21.07:0,21,392	0/0:17,0:17:30.09:0,30,529	0/0:20,0:18:27.09:0,27,505	0/0:28,0:28:84.28:0,84,1546	0/0:19,0:19:54.19:0,54,1003	0/0:26,0:22:36.12:0,36,673	0/0:20,0:20:41.97:0,42,750	1/1:2,6:4:12:151,12,0	1/1:0,23:15:30.06:441,30,0	1/1:0,8:7:5.80:88,6,0	0/0:12,0:11:27.08:0,27,473	0/0:13,0:11:18.06:0,18,330	0/0:28,0:21:27.09:0,27,504	0/0:25,0:23:57.20:0,57,1052	1/1:1,24:23:66.22:957,66,0	1/1:0,26:25:42.14:603,42,0	0/0:10,0:5:15.05:0,15,281
chr10	94270415	.	AT	A	3103.97	PASS	AB=0.571;AC=23;AF=0.411;AN=56;BaseQRankSum=11.237;DP=377;FS=1.874;HRun=8;HaplotypeScore=39.8999;InbreedingCoeff=0.8929;MQ=73.19;MQ0=0;MQRankSum=-0.652;QD=24.25;ReadPosRankSum=1.129;VQSLOD=3.9517;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:54.09:521,54,0	0/0:7,0:7:21.06:0,21,254	0/0:11,0:11:18.05:0,18,216	0/0:7,0:7:15.88:0,16,140	0/0:31,0:31:87.27:0,87,1050	1/1:0,14:14:42.07:406,42,0	1/1:0,3:3:6.01:58,6,0	1/1:3,24:27:72.05:677,72,0	0/0:8,0:8:21.06:0,21,254	0/0:13,0:13:36.11:0,36,435	0/0:19,0:19:48.15:0,48,580	0/1:2,6:8:3.64:153,0,4	1/1:1,7:8:18.03:174,18,0	1/1:0,6:6:18.03:174,18,0	0/0:8,0:8:24.07:0,24,290	0/0:11,0:11:33.10:0,33,399	1/1:1,14:15:42.07:406,42,0	0/0:9,0:9:24.07:0,24,288	0/0:27,0:28:66.19:0,66,787	0/0:19,1:20:31.18:0,31,645	0/0:10,0:10:27.07:0,27,315	1/1:0,4:4:9.01:87,9,0	1/1:0,14:14:42.07:406,42,0	1/1:0,1:1:3:29,3,0	0/0:16,0:16:42.13:0,42,507	0/0:28,0:28:81.21:0,81,962	0/0:23,0:22:66.16:0,66,761	1/1:2,7:9:24.04:231,24,0
chr10	94270574	.	T	TA	2170.74	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.205;DP=393;FS=4.033;HRun=1;HaplotypeScore=54.9423;InbreedingCoeff=0.8964;MQ=77.24;MQ0=0;MQRankSum=-0.485;QD=33.40;ReadPosRankSum=-3.291;VQSLOD=2.3665;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:15:33.11:448,33,0	0/0:3,0:3:9.03:0,9,117	0/0:10,0:10:27.04:0,27,328	0/0:7,0:7:12.04:0,12,149	0/0:22,0:22:66.20:0,66,842	0/0:11,0:11:25.75:0,26,118	0/0:6,0:6:15.37:0,15,58	1/1:4,37:41:99:1502,115,0	0/0:20,0:20:60.20:0,60,779	0/0:15,0:15:45.15:0,45,585	0/0:22,0:22:66.20:0,66,842	0/0:9,0:9:21.88:0,22,76	0/0:6,0:6:14.06:0,14,47	0/0:17,0:17:34.37:0,34,110	0/0:16,0:16:48.16:0,48,623	0/0:16,0:16:45.13:0,45,569	0/0:9,0:9:9.80:0,10,42	0/0:19,0:19:54.18:0,54,700	0/0:16,0:16:48.16:0,48,623	0/0:16,0:16:48.16:0,48,623	0/0:15,0:15:42.14:0,42,545	0/0:2,0:2:5.05:0,5,44	0/0:10,0:10:24.43:0,24,110	0/0:8,0:8:18.13:0,18,58	0/0:10,0:10:30.10:0,30,389	0/0:20,0:20:60.20:0,60,779	0/0:23,0:22:69.22:0,69,896	1/1:0,9:9:27.09:363,27,0
chr10	94270576	.	C	CT	5463.31	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=11.362;DP=396;FS=5.555;HRun=2;HaplotypeScore=44.0852;InbreedingCoeff=0.9596;MQ=76.15;MQ0=0;MQRankSum=-0.518;QD=37.42;ReadPosRankSum=-0.584;VQSLOD=4.8009;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:33.11:450,33,0	0/0:4,0:4:9.03:0,9,112	0/0:10,0:10:26.66:0,27,277	0/0:6,0:6:12.03:0,12,140	0/0:22,0:22:60.18:0,60,731	1/1:2,11:13:30.07:410,30,0	1/1:0,6:6:18.06:259,18,0	1/1:41,0:41:99:1553,117,0	0/0:20,0:20:60.19:0,60,744	0/0:15,0:15:45.14:0,45,558	0/0:21,0:21:63.20:0,63,781	1/1:0,9:9:27.09:389,27,0	1/1:0,6:6:18.06:259,18,0	1/1:0,17:17:45.15:648,45,0	0/0:16,0:16:48.15:0,48,595	0/0:16,0:16:48.14:0,48,582	1/1:0,9:9:24.08:346,24,0	0/0:19,0:19:51.16:0,51,632	0/0:16,0:16:42.13:0,42,518	0/0:16,0:16:48.15:0,48,595	0/0:15,0:15:45.14:0,45,556	1/1:2,1:3:3.01:43,3,0	1/1:1,9:10:27.09:389,27,0	1/1:0,8:8:24.08:346,24,0	0/0:10,0:10:30.09:0,30,372	0/0:20,0:20:57.18:0,57,707	0/0:24,0:23:69.22:0,69,855	1/1:9,0:9:27.09:372,27,0
chr10	94271050	.	GGAGAGAGAGA	G	1643.79	PASS	AB=0.882;AC=30;AF=0.536;AN=56;BaseQRankSum=3.674;DP=505;FS=11.874;HRun=0;HaplotypeScore=150.2824;InbreedingCoeff=0.4250;MQ=66.36;MQ0=6;MQRankSum=-2.382;QD=4.88;ReadPosRankSum=-1.178;VQSLOD=2.0554;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:33:17.83:18,0,54	1/1:4,1:5:3.01:89,3,0	0/1:18,0:12:0:0,0,0	0/0:27,0:12:0.47:0,0,1	0/1:23,0:33:3.10:24,0,3	0/0:9,0:14:8.60:0,9,127	0/0:11,0:13:10.10:0,10,92	0/0:27,0:26:12.43:0,12,172	1/1:8,4:12:6.02:177,6,0	1/1:20,6:27:17.37:253,17,0	1/1:28,0:30:11.61:106,12,0	0/0:9,0:13:5.50:0,5,27	0/0:12,0:12:15.04:0,15,299	0/0:20,0:20:17.98:0,18,240	1/1:6,4:11:6.02:158,6,0	1/1:9,4:13:3.11:89,3,0	0/0:11,0:16:6:0,6,115	1/1:15,0:15:3.01:70,3,0	1/1:18,3:21:5.95:112,6,0	1/1:13,1:14:3.01:89,3,0	0/1:13,0:13:8.02:14,0,8	0/1:19,0:25:8.27:8,0,91	0/0:14,0:14:8.99:0,9,74	0/1:12,0:12:5.68:6,0,265	1/1:12,4:16:6.02:177,6,0	1/1:10,0:20:11.40:217,11,0	1/1:14,1:16:12.02:211,12,0	0/0:10,0:10:15.01:0,15,431
chr10	94272012	.	TA	T	2776.05	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=6.823;DP=414;FS=7.392;HRun=5;HaplotypeScore=48.0741;InbreedingCoeff=0.9648;MQ=64.76;MQ0=0;MQRankSum=0.531;QD=27.22;ReadPosRankSum=2.194;VQSLOD=3.2585;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:0,0:5:11.50:0,12,58	0/0:10,0:10:30.10:0,30,410	0/0:4,0:4:12.03:0,12,152	0/0:3,0:3:6.02:0,6,78	0/0:25,0:25:66.21:0,66,884	1/1:0,15:15:42.12:476,42,0	1/1:1,5:6:12.03:136,12,0	0/0:1,0:32:89.09:0,89,485	0/0:13,0:13:36.12:0,36,490	0/0:28,0:28:84.27:0,84,1126	0/0:24,0:24:63.21:0,63,858	1/1:2,12:14:33.09:374,33,0	1/1:0,14:14:39.11:442,39,0	1/1:0,7:7:21.06:238,21,0	0/0:14,0:14:42.14:0,42,574	0/0:9,0:9:27.09:0,27,369	1/1:1,20:21:47.52:573,48,0	0/0:25,0:25:66.20:0,66,884	0/0:15,0:15:39.13:0,39,528	0/0:16,0:16:48.16:0,48,651	0/0:14,0:14:42.13:0,42,558	1/1:0,8:8:24.07:272,24,0	1/1:0,11:11:27.08:306,27,0	1/1:0,6:6:15.04:170,15,0	0/0:16,0:16:45.15:0,45,615	0/0:21,0:21:60.20:0,60,812	0/0:18,0:18:48.10:0,48,617	0/0:4,0:20:46:0,46,233
chr10	94272751	.	TC	T	3425.30	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=13.716;DP=619;FS=9.654;HRun=2;HaplotypeScore=80.0542;InbreedingCoeff=0.9983;MQ=79.66;MQ0=0;MQRankSum=-1.177;QD=37.23;ReadPosRankSum=-0.752;VQSLOD=3.3689;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:42:99:1635,126,0	0/0:10,0:10:27.09:0,27,405	0/0:16,0:16:39.13:0,39,569	0/0:28,0:27:23.70:0,24,612	0/0:14,0:14:42.14:0,42,625	0/0:19,0:19:57.19:0,57,850	0/0:11,0:11:33.11:0,33,495	1/1:1,36:37:99:1284,99,0	0/0:22,0:22:66.22:0,66,985	0/0:25,0:25:75.25:0,75,1119	0/0:18,0:18:54.18:0,54,809	0/0:14,0:14:42.14:0,42,629	0/0:26,0:26:78.26:0,78,1164	0/0:20,0:20:57.19:0,57,854	0/0:20,0:20:57.18:0,57,836	0/0:24,0:24:72.23:0,72,1055	0/0:28,0:28:84.27:0,84,1235	0/0:12,0:12:36.12:0,36,535	0/0:22,0:22:66.22:0,66,979	0/0:26,0:26:75.25:0,75,1119	0/0:28,0:28:84.28:0,84,1254	0/0:15,0:15:45.15:0,45,670	0/0:9,0:9:27.09:0,27,405	0/0:37,0:37:99:0,111,1584	0/0:25,0:25:75.25:0,75,1117	0/0:17,0:17:51.16:0,51,745	0/0:40,0:40:99:0,111,1653	1/1:0,13:13:39.13:506,39,0
chr10	94273626	.	A	AGTGT	1750.89	PASS	AB=0.878;AC=24;AF=0.429;AN=56;BaseQRankSum=5.733;DP=527;FS=10.285;HRun=0;HaplotypeScore=118.6179;InbreedingCoeff=0.7330;MQ=67.42;MQ0=8;MQRankSum=-3.667;QD=7.55;ReadPosRankSum=-1.520;VQSLOD=1.8637;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,8:21:20.81:422,21,0	0/0:10,0:12:21.06:0,21,313	0/0:35,0:24:14.88:0,15,226	0/0:24,0:13:9.02:0,9,122	0/0:24,0:24:51.16:0,51,779	1/1:27,0:26:14.71:168,15,0	1/1:20,0:19:12.02:172,12,0	1/1:31,0:28:25.89:363,26,0	0/0:15,0:15:27.09:0,27,432	0/0:14,0:14:18.06:0,18,282	0/0:15,0:15:18.06:0,18,288	1/1:13,0:13:6.02:95,6,0	1/1:13,0:13:9.03:125,9,0	1/1:13,0:14:9.03:152,9,0	0/0:17,0:17:27.09:0,27,429	0/0:14,0:15:14.54:0,15,372	1/1:11,0:18:6.49:105,6,0	0/1:20,0:21:16.90:17,0,531	0/0:15,0:13:6.02:0,6,93	0/0:30,0:30:65.99:0,66,976	0/0:20,0:20:39.13:0,39,603	1/1:9,0:9:9.03:153,9,0	1/1:19,0:17:2.56:64,3,0	0/1:9,0:12:7.38:40,0,7	0/0:21,0:22:50.19:0,50,746	0/0:11,0:12:21.95:0,22,318	0/0:22,0:24:42.13:0,42,628	1/1:12,0:12:6.01:78,6,0
chr10	94273731	.	T	TA	19572.54	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-10.080;DP=598;FS=4.758;HRun=0;HaplotypeScore=60.2911;InbreedingCoeff=0.9994;MQ=81.87;MQ0=0;MQRankSum=-2.273;QD=44.08;ReadPosRankSum=4.033;VQSLOD=5.1976;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:22:54.18:861,54,0	1/1:0,13:13:36.12:576,36,0	0/0:16,0:16:48.16:0,48,664	0/0:18,0:18:34.55:0,35,626	1/1:1,33:35:99:1612,102,0	1/1:0,28:28:75.26:1198,75,0	1/1:0,11:11:27.09:431,27,0	1/1:1,29:30:90.27:1402,90,0	1/1:0,23:23:63.21:1007,63,0	1/1:0,23:23:69.22:1081,69,0	1/1:0,22:22:60.20:959,60,0	1/1:0,14:14:39.13:623,39,0	1/1:1,15:16:39.13:623,39,0	1/1:0,29:29:84.29:1342,84,0	1/1:0,30:30:87.30:1385,87,0	1/1:0,21:21:57.19:911,57,0	1/1:0,17:17:51.17:814,51,0	1/1:2,19:21:48.16:767,48,0	0/0:15,0:15:45.13:0,45,598	0/0:34,0:34:99:0,102,1427	0/0:16,0:16:48.15:0,48,654	1/1:0,16:16:48.16:767,48,0	1/1:0,23:23:69.24:1103,69,0	1/1:0,25:25:63.21:1006,63,0	1/1:0,16:16:45.15:720,45,0	0/0:28,0:28:84.28:0,84,1173	0/0:27,0:27:81.27:0,81,1130	1/1:1,8:9:24.08:383,24,0
chr10	94273778	.	T	TCTA	2802.96	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.026;DP=598;FS=7.862;HRun=0;HaplotypeScore=115.6276;InbreedingCoeff=0.9981;MQ=85.01;MQ0=0;MQRankSum=-7.220;QD=45.21;ReadPosRankSum=-1.722;VQSLOD=5.1016;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:26:54.19:1161,54,0	0/0:15,0:15:36.11:0,36,547	0/0:23,0:23:69.24:0,69,1090	0/0:21,0:21:51.16:0,51,783	0/0:30,0:30:78.27:0,78,1233	0/0:27,0:27:60.19:0,60,917	0/0:14,0:13:30.10:0,30,473	1/1:13,15:28:63.22:1328,63,0	0/0:15,0:15:42.14:0,42,666	0/0:21,0:20:57.19:0,57,904	0/0:20,0:20:54.18:0,54,854	0/0:19,0:19:54.16:0,54,810	0/0:20,0:20:48.16:0,48,758	0/0:29,0:29:75.20:0,75,1137	0/0:32,0:32:87.27:0,87,1351	0/0:21,0:21:54.15:0,54,789	0/0:15,0:15:36.12:0,36,570	0/0:23,0:23:57.11:0,57,842	0/0:14,0:14:33.11:0,33,520	0/0:29,0:29:84.29:0,84,1322	0/0:16,0:16:42.11:0,42,637	0/0:13,0:13:36.12:0,36,571	0/0:23,0:23:60.19:0,60,924	0/0:19,0:19:48.16:0,48,747	0/0:17,0:17:51.17:0,51,788	0/0:27,0:27:69.24:0,69,1094	0/0:33,0:33:93.29:0,93,1429	1/1:1,7:8:21.07:456,21,0
chr10	94274599	.	GC	G	3898.57	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=6.313;DP=493;FS=5.830;HRun=1;HaplotypeScore=60.6348;InbreedingCoeff=0.9776;MQ=69.97;MQ0=4;MQRankSum=1.343;QD=29.53;ReadPosRankSum=2.768;VQSLOD=3.2597;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.02:0,84,1181	0/0:11,0:11:33.10:0,33,474	0/0:17,0:12:23.50:0,23,249	0/0:10,0:7:5.32:0,5,95	0/0:19,1:20:52.65:0,53,688	1/1:0,13:13:30.10:410,30,0	1/1:1,10:11:21.07:285,21,0	0/0:25,0:25:74.33:0,74,857	0/0:24,0:24:67.37:0,67,883	0/0:16,0:16:37.80:0,38,508	0/0:20,0:20:52.87:0,53,686	1/1:7,13:20:50.17:664,50,0	1/1:0,15:15:36.12:484,36,0	1/1:0,8:9:18.05:230,18,0	0/0:17,0:17:48.98:0,49,630	0/0:19,0:19:51.13:0,51,729	1/1:0,26:27:60.17:799,60,0	0/0:21,0:21:63.13:0,63,881	0/0:23,0:22:66.11:0,66,835	0/0:17,0:17:51.14:0,51,728	0/0:12,0:12:31.84:0,32,424	1/1:0,5:7:17.94:172,18,0	1/1:0,12:13:30.04:375,30,0	1/1:1,16:17:28.50:479,28,0	0/0:14,0:14:42.09:0,42,568	0/0:23,0:23:67.64:0,68,875	0/0:26,1:27:69.65:0,70,967	0/0:16,0:14:42.14:0,42,621
chr10	94274600	.	CT	C	1187.77	PASS	AB=0.914;AC=20;AF=0.357;AN=56;BaseQRankSum=11.709;DP=511;FS=3.086;HRun=12;HaplotypeScore=71.2178;InbreedingCoeff=0.6500;MQ=69.43;MQ0=4;MQRankSum=0.978;QD=6.49;ReadPosRankSum=1.476;VQSLOD=2.4107;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:74.79:0,75,710	0/0:10,0:11:29.89:0,30,282	0/0:17,0:12:4.16:0,4,96	0/0:10,0:7:4.62:0,5,50	0/0:20,0:20:32.55:0,33,355	1/1:13,0:13:28.69:154,29,0	1/1:12,0:12:20.25:114,20,0	0/0:26,0:27:34.24:0,34,353	0/0:25,0:25:62.98:0,63,616	0/1:14,2:16:11.82:12,0,225	0/1:18,2:20:4.39:4,0,317	0/1:21,0:21:38.75:162,0,39	1/1:15,0:15:34.72:196,35,0	1/1:9,0:9:16.71:86,17,0	0/0:19,1:20:15.82:0,16,334	0/0:20,0:20:45.06:0,45,440	1/1:27,0:26:56.97:310,57,0	0/0:24,0:24:51.08:0,51,510	0/0:24,0:23:45.04:0,45,437	0/0:18,0:18:45.05:0,45,437	0/1:10,2:12:16.43:16,0,207	1/1:8,0:8:10.11:43,10,0	1/1:13,0:13:25.07:125,25,0	1/1:17,0:17:7.51:167,8,0	0/0:16,0:16:33.04:0,33,327	0/0:21,2:23:20.76:0,21,425	0/0:24,1:26:42.69:0,43,589	0/0:15,0:14:41.87:0,42,398
chr10	94275960	.	T	TTTG	8270.04	PASS	AB=0.609;AC=21;AF=0.375;AN=56;BaseQRankSum=-9.537;DP=775;FS=1.608;HRun=0;HaplotypeScore=123.1378;InbreedingCoeff=0.9080;MQ=65.19;MQ0=2;MQRankSum=1.213;QD=31.45;ReadPosRankSum=-1.078;VQSLOD=5.1227;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,105,1407	1/1:3,3:6:9.03:179,9,0	0/0:38,0:30:38.99:0,39,485	0/0:43,0:37:46.96:0,47,580	1/1:6,19:24:54.10:950,54,0	0/0:35,0:35:69.20:0,69,927	0/0:26,0:26:48.74:0,49,688	1/1:5,0:37:48.13:679,48,0	1/1:8,19:27:48.16:932,48,0	1/1:8,22:31:72.17:1245,72,0	0/1:10,17:27:44.52:524,0,45	0/0:12,0:12:30.09:0,30,402	0/0:18,0:18:39.13:0,39,543	0/0:29,0:29:69.20:0,69,914	1/1:6,27:33:68.84:1354,69,0	1/1:10,19:30:45.15:898,45,0	0/0:36,0:36:69.23:0,69,954	1/1:4,9:13:24.08:479,24,0	0/0:27,0:27:39.12:0,39,520	0/0:23,0:23:48.15:0,48,648	0/0:36,0:36:69.17:0,69,891	0/0:25,0:25:52.06:0,52,712	0/0:23,0:23:42.14:0,42,574	0/0:36,0:36:84.28:0,84,1169	1/1:7,18:25:42.14:828,42,0	0/0:26,0:25:11.54:0,12,693	0/0:29,0:28:69.20:0,69,929	1/1:2,0:8:16.03:201,16,0
chr10	94278108	.	CA	C	5655.25	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.829;DP=568;FS=6.360;HRun=1;HaplotypeScore=60.3927;InbreedingCoeff=0.9938;MQ=72.75;MQ0=1;MQRankSum=-0.960;QD=36.02;ReadPosRankSum=2.261;VQSLOD=5.0647;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1523	1/1:0,9:9:27.09:374,27,0	0/0:24,0:19:40.63:0,41,564	0/0:19,0:12:23.10:0,23,220	1/1:5,20:25:66.06:842,66,0	0/0:22,0:22:60.18:0,60,909	0/0:20,0:20:60.15:0,60,863	0/0:22,0:22:45.13:0,45,638	1/1:0,18:18:51.17:700,51,0	1/1:0,15:15:42.02:534,42,0	1/1:0,23:23:57.19:785,57,0	0/0:26,0:26:78.26:0,78,1220	0/0:25,0:25:75.26:0,75,1192	0/0:26,0:26:75.20:0,75,1142	1/1:0,22:22:60.20:831,60,0	1/1:0,9:9:21.07:291,21,0	0/0:29,0:29:87.23:0,87,1305	1/1:0,14:14:42.14:582,42,0	0/0:13,0:13:39.12:0,39,582	0/0:18,0:18:54.17:0,54,831	0/0:32,0:32:93.18:0,93,1349	0/0:16,0:16:48.13:0,48,716	0/0:10,0:10:27.08:0,27,407	0/0:25,0:25:75.16:0,75,1073	1/1:0,22:22:54.07:716,54,0	0/0:12,0:12:36.10:0,36,532	0/0:30,0:30:84.23:0,84,1242	0/0:7,0:7:12.04:0,12,191
chr10	94278376	.	C	CAT	16187.59	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-4.088;DP=480;FS=3.469;HRun=0;HaplotypeScore=55.9712;InbreedingCoeff=0.9664;MQ=69.14;MQ0=2;MQRankSum=-1.056;QD=46.52;ReadPosRankSum=0.945;VQSLOD=6.2095;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:26:66.23:1205,66,0	1/1:0,6:6:18.06:330,18,0	0/0:7,0:7:20.66:0,21,268	0/0:6,0:6:11.40:0,11,137	1/1:2,19:23:51.17:925,51,0	1/1:0,20:20:57.20:1045,57,0	1/1:0,5:6:18.06:324,18,0	1/1:2,35:37:99:1900,105,0	1/1:0,10:10:30.10:550,30,0	1/1:2,16:18:51.15:884,51,0	1/1:2,18:20:51.17:930,51,0	1/1:0,8:8:21.07:385,21,0	1/1:1,24:25:66.23:1210,66,0	1/1:0,15:16:42.14:770,42,0	1/1:3,23:27:57.20:1041,57,0	1/1:4,12:17:39.13:696,39,0	1/1:4,17:22:45.15:825,45,0	1/1:2,11:14:36.12:649,36,0	0/0:21,0:21:63.16:0,63,819	0/0:22,0:22:63.20:0,63,884	0/0:13,0:13:24.08:0,24,344	1/1:1,12:13:33.11:604,33,0	1/1:1,14:15:42.14:770,42,0	1/1:1,4:4:6.02:110,6,0	1/1:0,14:14:42.14:762,42,0	0/0:28,1:29:23.26:0,23,1020	0/0:34,0:34:99:0,102,1458	1/1:0,5:5:15.05:275,15,0
chr10	94278746	.	T	TA	3768.68	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-6.583;DP=466;FS=11.063;HRun=10;HaplotypeScore=45.3935;InbreedingCoeff=0.9403;MQ=69.90;MQ0=1;MQRankSum=-0.811;QD=20.05;ReadPosRankSum=1.159;VQSLOD=3.8681;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,20:25:51.13:544,51,0	1/1:2,7:9:17.96:177,18,0	0/0:9,0:9:20.94:0,21,171	0/0:11,0:9:4.21:0,4,27	1/1:7,18:25:7.82:481,8,0	0/0:15,0:15:41.43:0,41,326	0/0:11,0:11:20.94:0,21,172	0/0:22,0:22:59.88:0,60,484	1/1:1,8:9:24.06:256,24,0	1/1:4,12:16:36.09:383,36,0	1/1:4,17:21:51.05:518,51,0	0/0:17,0:17:43.64:0,44,377	0/0:24,0:24:53.87:0,54,440	0/0:18,0:18:41.95:0,42,345	1/1:3,15:18:33.08:352,33,0	1/1:4,13:17:33.97:354,34,0	1/1:3,0:27:54.16:280,54,0	1/1:2,7:9:18.04:191,18,0	0/0:13,0:13:29.93:0,30,243	0/0:26,0:26:62.89:0,63,512	0/0:18,0:18:47.90:0,48,386	0/0:11,0:11:29.97:0,30,246	0/0:21,0:21:47.92:0,48,394	0/0:8,0:8:17.97:0,18,148	1/1:3,9:12:4.14:233,4,0	0/0:21,0:21:47.80:0,48,381	0/0:23,0:23:65.92:0,66,540	0/0:9,0:9:14.96:0,15,123
chr10	94280311	.	G	GA	7587.20	PASS	AB=0.913;AC=27;AF=0.482;AN=56;BaseQRankSum=-6.231;DP=536;FS=3.599;HRun=8;HaplotypeScore=57.2798;InbreedingCoeff=0.9230;MQ=62.49;MQ0=7;MQRankSum=1.325;QD=25.04;ReadPosRankSum=2.272;VQSLOD=5.7660;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:57.17:658,57,0	1/1:3,9:12:24.07:277,24,0	0/0:8,0:6:8.64:0,9,105	0/0:15,0:10:27:0,27,241	1/1:6,34:38:93.27:1069,93,0	0/0:16,0:16:42.02:0,42,384	0/0:18,0:18:42:0,42,384	1/1:8,23:31:69.19:783,69,0	1/1:5,18:23:42.12:481,42,0	1/1:1,15:16:45.13:519,45,0	1/1:3,20:23:57.13:642,57,0	0/0:16,0:16:35.99:0,36,324	0/0:12,0:12:30.02:0,30,275	0/0:15,0:13:39.02:0,39,357	1/1:3,16:19:42.08:470,42,0	1/1:3,9:11:24.07:270,24,0	1/1:4,16:18:48.14:554,48,0	1/1:2,16:17:45.05:501,45,0	0/0:21,0:21:56.57:0,57,487	0/0:16,0:15:36.02:0,36,329	0/0:20,0:19:38.71:0,39,341	0/0:18,0:18:42.02:0,42,384	0/0:20,0:20:48.02:0,48,439	0/0:16,0:14:39.02:0,39,357	1/1:2,30:32:81.24:935,81,0	0/1:19,2:21:12.21:12,0,406	0/0:22,0:21:47.96:0,48,486	1/1:1,15:16:36.11:415,36,0
chr10	94280961	.	C	CT	19630.99	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=18.630;DP=802;FS=5.687;HRun=2;HaplotypeScore=174.5098;InbreedingCoeff=0.9894;MQ=85.28;MQ0=0;MQRankSum=-4.414;QD=32.94;ReadPosRankSum=3.524;VQSLOD=4.1879;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,61:68:99:2143,160,0	1/1:0,13:13:39.13:529,39,0	0/0:23,0:23:54.12:0,54,628	0/0:28,0:28:75.04:0,75,861	1/1:4,21:25:59.91:684,60,0	1/1:1,18:19:54.14:706,54,0	1/1:4,32:36:84.28:1152,84,0	1/1:4,37:41:96.88:1459,97,0	1/1:4,35:39:99:1339,100,0	1/1:4,25:29:75.70:993,76,0	1/1:2,19:21:51.17:696,51,0	1/1:0,18:18:45.15:617,45,0	1/1:1,26:27:72.10:970,72,0	1/1:2,22:24:57.19:782,57,0	1/1:1,40:41:99:1515,111,0	1/1:0,17:17:51.17:697,51,0	1/1:7,32:39:81.27:1107,81,0	1/1:3,13:16:36.97:471,37,0	0/0:27,0:27:75.17:0,75,873	0/0:27,0:27:81.22:0,81,966	0/0:35,0:35:99:0,105,1277	1/1:5,19:24:51.03:647,51,0	1/1:2,22:24:51.17:693,51,0	1/1:2,36:38:91.18:1232,91,0	1/1:1,32:33:81.20:1075,81,0	0/0:30,0:30:90.25:0,90,1099	0/0:36,0:36:99:0,108,1288	1/1:0,4:4:9.03:122,9,0
chr10	94280963	.	T	TC	7060.19	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=19.949;DP=783;FS=5.361;HRun=0;HaplotypeScore=214.2458;InbreedingCoeff=0.9871;MQ=85.61;MQ0=0;MQRankSum=-5.201;QD=12.28;ReadPosRankSum=6.078;VQSLOD=5.0015;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:65,0:65:93.47:782,93,0	1/1:13,0:13:37.42:197,37,0	0/0:22,0:22:56.33:0,56,771	0/0:28,0:28:78.25:0,78,1066	1/1:22,1:23:42.26:284,42,0	1/1:18,1:19:51.98:276,52,0	1/1:37,0:37:27.18:349,27,0	1/1:37,0:37:63.95:460,64,0	1/1:40,0:40:40.83:462,41,0	1/1:28,0:28:58.27:330,58,0	1/1:19,0:19:49.01:267,49,0	1/1:19,0:19:46:240,46,0	1/1:26,0:26:67.76:364,68,0	1/1:22,0:22:54.59:287,55,0	1/1:42,0:42:79.05:516,79,0	1/1:17,0:17:48.99:265,49,0	1/1:34,0:34:53.71:406,54,0	1/1:14,0:14:17.97:156,18,0	0/0:27,0:27:77.98:0,78,1037	0/0:27,0:27:81.27:0,81,1130	0/0:37,0:37:99:0,108,1491	1/1:22,2:24:40.94:252,41,0	1/1:23,0:23:34.48:238,34,0	1/1:37,0:37:73.34:461,73,0	1/1:31,1:32:77.63:417,78,0	0/0:31,0:31:90.30:0,90,1257	0/0:36,0:36:99:0,108,1492	1/1:4,0:4:8.75:51,9,0
chr10	94282382	.	T	TTG	4100.79	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-4.845;DP=695;FS=0.440;HRun=0;HaplotypeScore=125.8487;InbreedingCoeff=0.9832;MQ=85.59;MQ0=0;MQRankSum=-2.849;QD=45.06;ReadPosRankSum=-2.093;VQSLOD=4.0489;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:35:90.31:1642,90,0	0/0:9,0:9:26.12:0,26,142	0/0:18,0:18:51.13:0,51,663	0/0:25,0:25:50.76:0,51,663	0/0:22,0:22:60.95:0,61,330	0/0:37,0:37:99:0,102,1445	0/0:26,0:26:72.24:0,72,1032	1/1:8,30:39:93.24:1579,93,0	0/0:24,0:24:58.05:0,58,315	0/0:38,0:38:99:0,107,592	0/0:21,0:21:49.34:0,49,267	0/0:19,0:19:54.16:0,54,755	0/0:21,0:21:60.19:0,60,843	0/0:25,0:25:69.23:0,69,989	0/0:36,0:36:98.69:0,99,535	0/0:26,0:26:60.85:0,61,330	1/1:0,14:14:39.13:714,39,0	0/0:24,0:24:60.95:0,61,330	0/0:15,0:15:45.14:0,45,612	0/0:25,0:25:72.22:0,72,999	0/0:32,0:32:81.26:0,81,1144	0/0:23,0:23:66.21:0,66,927	0/0:29,0:29:84.26:0,84,1169	0/0:16,0:16:48.16:0,48,685	0/0:27,0:27:75.47:0,75,409	0/0:32,0:32:89.98:0,90,1208	0/0:34,0:34:99:0,99,1417	1/1:0,3:3:9.03:165,9,0
chr10	94282384	.	GT	G	7676.64	PASS	AB=0.895;AC=19;AF=0.339;AN=56;BaseQRankSum=12.103;DP=693;FS=0.962;HRun=3;HaplotypeScore=97.5183;InbreedingCoeff=0.9177;MQ=86.67;MQ0=0;MQRankSum=-6.997;QD=29.64;ReadPosRankSum=2.161;VQSLOD=4.3528;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:86.67:0,87,471	1/1:0,9:9:27.08:335,27,0	0/0:20,0:20:60.15:0,60,780	0/0:25,0:25:50.57:0,51,648	1/1:0,22:22:63.20:781,63,0	0/0:35,0:35:99:0,102,1469	0/0:27,0:27:78.26:0,78,1122	0/0:33,0:33:90.14:0,90,563	1/1:1,22:23:60.19:744,60,0	1/1:1,37:38:99:1320,108,0	1/1:2,19:21:51.16:632,51,0	0/0:20,0:20:57.18:0,57,802	0/0:21,0:21:60.18:0,60,845	0/0:27,0:27:72.23:0,72,1021	1/1:0,36:36:99:1265,102,0	1/1:1,25:26:66.21:818,66,0	0/0:14,0:14:40.72:0,41,229	1/1:0,24:24:63.20:781,63,0	0/0:15,0:15:42.13:0,42,589	0/0:24,0:24:69.23:0,69,994	0/0:34,0:34:90.28:0,90,1258	0/0:23,0:23:66.22:0,66,949	0/0:29,0:29:84.26:0,84,1175	0/0:16,0:16:48.16:0,48,688	1/1:0,26:26:78.25:967,78,0	0/1:30,4:34:34.02:34,0,1178	0/0:33,0:33:99:0,99,1425	0/0:5,0:5:14.73:0,15,128
chr10	94286674	.	CA	C	6845.30	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=11.635;DP=510;FS=1.518;HRun=7;HaplotypeScore=48.7343;InbreedingCoeff=0.9946;MQ=78.86;MQ0=0;MQRankSum=-0.695;QD=26.95;ReadPosRankSum=1.620;VQSLOD=5.4087;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:48.11:490,48,0	1/1:0,7:7:21.05:214,21,0	0/0:15,0:15:33.10:0,33,399	0/0:8,0:8:24.08:0,24,298	1/1:4,25:29:69.15:703,69,0	0/0:23,0:23:66.21:0,66,830	0/0:10,0:10:30.10:0,30,377	1/1:6,26:32:75.16:765,75,0	1/1:1,19:20:54.12:551,54,0	1/1:0,21:21:63.12:634,63,0	1/1:0,32:32:90.20:918,90,0	0/0:7,0:7:18.06:0,18,226	0/0:16,0:16:42.13:0,42,515	0/0:21,0:21:57.18:0,57,715	1/1:2,20:22:54.12:551,54,0	1/1:2,22:24:66.15:673,66,0	1/1:1,16:17:48.11:489,48,0	1/1:0,12:12:30.07:306,30,0	0/0:16,0:16:45.14:0,45,562	0/0:27,0:27:72.21:0,72,882	0/0:16,0:16:42.13:0,42,528	0/0:15,0:15:42.13:0,42,528	0/0:22,0:22:57.18:0,57,715	0/0:7,0:7:15.05:0,15,189	1/1:1,12:13:36.08:367,36,0	0/0:25,0:25:63.19:0,63,781	0/0:28,0:27:75.23:0,75,924	1/1:0,9:9:18.04:184,18,0
chr10	94287153	.	G	GA	1111.60	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.866;DP=506;FS=2.824;HRun=9;HaplotypeScore=52.5083;InbreedingCoeff=0.8618;MQ=80.46;MQ0=0;MQRankSum=0.105;QD=23.16;ReadPosRankSum=-1.887;VQSLOD=3.8393;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:47.98:0,48,417	0/0:3,0:3:9:0,9,78	0/0:18,1:19:13.66:0,14,192	0/0:13,0:11:11.51:0,12,87	0/0:29,0:29:74.98:0,75,651	0/0:23,0:23:50.94:0,51,439	0/0:11,0:11:32.99:0,33,286	1/1:6,28:34:78.06:834,78,0	0/0:17,0:17:38.88:0,39,326	0/0:25,0:25:39.60:0,40,473	0/0:23,0:23:56.98:0,57,494	0/0:10,0:10:29.98:0,30,257	0/0:12,0:12:32.99:0,33,286	0/0:14,0:14:38.96:0,39,331	0/0:15,0:15:41.99:0,42,365	0/0:13,0:13:32.98:0,33,282	0/0:0,0:11:22.41:0,22,66	0/0:16,1:17:2.74:0,3,253	0/0:28,0:28:71.96:0,72,621	0/0:28,0:28:74.97:0,75,651	0/0:14,0:14:32.99:0,33,286	0/0:16,0:16:47.94:0,48,405	0/0:20,0:20:44.99:0,45,391	0/0:12,0:12:29.99:0,30,260	0/0:21,1:22:23.80:0,24,435	0/0:21,0:21:59.96:0,60,517	0/0:25,0:25:56.93:0,57,491	1/1:1,13:14:36.10:398,36,0
chr10	94288028	.	AAAAC	A	835.33	PASS	AB=0.941;AC=3;AF=0.054;AN=56;BaseQRankSum=6.010;DP=591;FS=9.637;HRun=0;HaplotypeScore=97.6784;InbreedingCoeff=0.6443;MQ=64.81;MQ0=0;MQRankSum=-1.796;QD=17.40;ReadPosRankSum=1.932;VQSLOD=2.6690;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,23:32:38.08:927,38,0	0/0:9,0:9:18.06:0,18,427	0/0:22,0:21:45.08:0,45,951	0/0:20,0:17:39.10:0,39,796	0/0:32,0:32:90.31:0,90,2213	0/0:21,0:21:54.18:0,54,1273	0/0:16,0:16:39.13:0,39,961	0/0:28,0:28:54.18:0,54,1266	0/0:18,0:18:48.15:0,48,1113	0/0:22,0:22:51.17:0,51,1212	0/0:28,0:28:81.27:0,81,1906	0/0:16,0:16:48.16:0,48,1183	0/0:20,0:20:45.15:0,45,1038	0/0:18,0:18:45.14:0,45,1034	0/0:22,0:22:51.18:0,51,1257	0/0:26,0:26:72.23:0,72,1702	0/0:10,0:18:39.12:0,39,652	0/0:22,0:22:45.15:0,45,1079	0/0:21,0:21:48.12:0,48,1129	0/0:21,0:21:57.20:0,57,1387	0/0:9,0:9:18.06:0,18,444	0/0:16,0:16:42.14:0,42,952	0/1:15,1:16:10.85:11,0,848	0/0:31,0:31:84.29:0,84,2070	0/0:30,0:30:75.24:0,75,1757	0/0:17,0:17:48.16:0,48,1181	0/0:34,0:34:84.26:0,84,1949	0/0:6,0:6:12.04:0,12,295
chr10	94289633	.	T	TC	6610.77	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-15.980;DP=591;FS=0.724;HRun=0;HaplotypeScore=97.8114;InbreedingCoeff=0.9894;MQ=84.51;MQ0=0;MQRankSum=-0.678;QD=36.73;ReadPosRankSum=4.601;VQSLOD=4.6162;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:86.09:0,86,574	0/0:17,0:17:43.51:0,44,264	0/0:27,0:26:75:0,75,891	0/0:24,0:23:45.93:0,46,513	0/0:28,0:28:62.93:0,63,372	1/1:0,23:23:69.23:1009,69,0	1/1:0,12:12:27.09:395,27,0	0/0:26,0:26:78.24:0,78,1049	0/0:16,0:16:39.59:0,40,207	0/0:28,0:27:74.25:0,74,485	0/0:18,0:18:49.40:0,49,296	1/1:0,19:19:45.15:658,45,0	1/1:0,27:27:57.19:834,57,0	1/1:0,26:26:69.23:1010,69,0	0/0:23,0:23:57.79:0,58,351	0/0:26,0:26:69.54:0,70,420	1/1:0,23:23:60.20:878,60,0	0/0:18,0:18:40.26:0,40,228	0/0:15,0:15:45.15:0,45,620	0/0:28,0:28:81.22:0,81,1092	0/0:6,0:6:18.04:0,18,233	1/1:0,14:14:39.05:536,39,0	1/1:0,22:22:56.87:834,57,0	1/1:0,14:14:33.04:457,33,0	0/0:26,0:26:70.26:0,70,440	0/0:22,0:22:66.13:0,66,852	0/0:28,0:28:84.24:0,84,1117	0/0:3,0:3:9.03:0,9,126
chr10	94289637	.	T	TTTG	10808.90	PASS	AB=0.750;AC=20;AF=0.357;AN=56;BaseQRankSum=-12.917;DP=584;FS=2.275;HRun=0;HaplotypeScore=105.3433;InbreedingCoeff=0.8464;MQ=84.77;MQ0=0;MQRankSum=-5.495;QD=42.72;ReadPosRankSum=2.829;VQSLOD=6.4104;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:31:63.06:63,0,107	1/1:0,14:16:45.11:924,45,0	0/0:26,0:25:74.40:0,74,912	0/0:25,0:24:35.44:0,35,577	1/1:1,25:29:83.89:1334,84,0	0/0:24,0:24:71.80:0,72,564	0/0:11,0:11:26.96:0,27,220	0/0:26,0:26:78.23:0,78,1158	1/1:0,16:17:42.14:933,42,0	1/1:1,24:28:84.15:1544,84,0	1/1:1,18:20:48.11:942,48,0	0/0:18,0:18:44.89:0,45,357	0/0:25,0:25:56.86:0,57,451	0/0:26,0:26:71.81:0,72,566	1/1:0,18:22:54.18:1189,54,0	1/1:0,24:25:66.23:1533,66,0	0/0:22,0:22:62.82:0,63,495	1/1:0,16:17:42.14:934,42,0	0/0:16,0:16:48.14:0,48,749	0/0:27,0:27:81.22:0,81,1237	0/0:5,0:5:15.05:0,15,249	0/0:13,0:13:35.30:0,35,262	0/0:24,0:24:65.37:0,65,522	0/0:12,0:12:32.90:0,33,257	1/1:0,24:25:63.22:1406,63,0	0/1:21,1:22:6.84:7,0,839	0/0:28,0:28:84.24:0,84,1296	0/0:3,0:3:9.03:0,9,149
chr10	94290909	.	ATG	A	11033.43	PASS	AB=0.611;AC=37;AF=0.661;AN=56;BaseQRankSum=10.103;DP=774;FS=11.354;HRun=0;HaplotypeScore=107.4724;InbreedingCoeff=0.9335;MQ=61.13;MQ0=23;MQRankSum=1.710;QD=23.68;ReadPosRankSum=2.255;VQSLOD=5.0222;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:65.37:0,65,974	1/1:0,3:3:9.03:114,9,0	0/0:49,0:24:32.10:0,32,445	0/0:49,0:17:15.62:0,16,182	1/1:5,17:21:36.11:454,36,0	1/1:2,37:39:90.20:1114,90,0	1/1:3,24:27:39.07:492,39,0	1/1:9,34:43:96.28:1180,96,0	1/1:6,18:23:45.14:565,45,0	1/1:9,23:32:72.17:864,72,0	1/1:2,22:24:44.98:568,45,0	1/1:2,19:20:36.10:439,36,0	1/1:5,24:29:57.18:718,57,0	1/1:3,21:24:45.14:568,45,0	1/1:8,31:40:63.03:771,63,0	1/1:3,17:19:27.09:341,27,0	0/0:27,0:27:59.46:0,59,1025	1/1:3,14:17:14.90:359,15,0	0/0:25,0:23:26.09:0,26,914	0/0:26,0:26:60.03:0,60,988	0/0:41,0:40:58.15:0,58,1441	1/1:3,19:21:45.14:568,45,0	1/1:4,11:14:27.08:336,27,0	1/1:10,19:29:57.16:704,57,0	1/1:3,21:24:51.16:643,51,0	0/0:26,2:28:31.36:0,31,1032	0/0:28,0:28:75.22:0,75,1181	0/1:4,7:11:2.72:235,0,3
chr10	94290922	.	TGA	T	2955.88	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=16.519;DP=779;FS=4.034;HRun=0;HaplotypeScore=137.5279;InbreedingCoeff=0.2467;MQ=61.51;MQ0=25;MQRankSum=0.769;QD=5.72;ReadPosRankSum=9.503;VQSLOD=1.5374;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,6:34:46.70:0,47,1103	1/1:3,0:3:8.39:39,8,0	0/0:53,0:23:4.16:0,4,519	0/1:55,0:19:40.15:40,0,227	1/1:20,0:19:11.71:133,12,0	0/1:44,0:44:71.10:303,0,71	1/1:25,0:25:13.27:144,13,0	0/1:45,0:45:99:286,0,195	0/1:22,0:21:23.56:169,0,24	0/1:30,0:29:70.04:150,0,70	0/1:26,0:26:19.96:143,0,20	0/1:25,0:24:81:117,0,81	1/1:26,0:26:17.02:267,17,0	1/1:21,0:21:41.82:193,42,0	1/1:34,0:34:3.57:196,4,0	1/1:19,0:18:2.10:92,2,0	0/0:30,0:30:69.61:0,70,1259	0/1:17,0:17:13.50:106,0,14	0/0:27,0:24:41.74:0,42,1131	0/0:26,0:26:74.97:0,75,1161	0/0:40,0:38:86.79:0,87,1642	1/1:22,0:21:20.29:174,20,0	1/1:14,0:13:3.42:98,3,0	0/1:35,0:35:99:182,0,100	1/1:23,0:23:25.39:199,25,0	0/0:26,0:26:61.92:0,62,1160	0/0:26,0:26:75.12:0,75,1254	1/1:9,0:9:24.94:117,25,0
chr10	94292234	.	G	GA	6792.30	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-15.425;DP=661;FS=1.405;HRun=7;HaplotypeScore=66.3358;InbreedingCoeff=0.9956;MQ=68.61;MQ0=1;MQRankSum=-0.605;QD=30.73;ReadPosRankSum=0.663;VQSLOD=5.1225;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:99:0,147,1419	0/0:11,0:11:33.05:0,33,318	0/0:19,0:16:12.44:0,12,317	0/0:20,0:19:38.67:0,39,332	0/0:28,0:28:78.09:0,78,742	1/1:3,17:20:45.14:544,45,0	1/1:1,16:17:39.12:471,39,0	1/1:5,35:40:99:1253,105,0	0/0:26,0:26:63.09:0,63,608	0/0:25,0:25:69.11:0,69,666	0/0:21,0:21:57.05:0,57,542	1/1:0,22:22:60.18:725,60,0	1/1:2,22:24:66.20:797,66,0	1/1:1,21:22:60.18:719,60,0	0/0:26,0:26:72.09:0,72,689	0/0:25,0:25:72.09:0,72,684	0/0:18,0:18:41.38:0,41,429	0/0:24,0:24:63.10:0,63,608	0/0:25,0:25:63.07:0,63,596	0/0:26,0:26:69.10:0,69,660	0/0:26,0:26:72.11:0,72,695	1/1:2,19:21:51.16:616,51,0	1/1:2,20:22:54.17:652,54,0	1/1:0,20:20:57.17:689,57,0	0/0:24,0:24:63.07:0,63,596	0/0:19,0:19:57.08:0,57,546	0/0:27,0:27:69.09:0,69,660	1/1:2,11:13:27.08:326,27,0
chr10	94293821	.	CTGTGTG	C	8228.83	PASS	AB=0.771;AC=34;AF=0.607;AN=56;BaseQRankSum=11.412;DP=757;FS=1.168;HRun=0;HaplotypeScore=185.8636;InbreedingCoeff=0.8489;MQ=52.01;MQ0=21;MQRankSum=-9.039;QD=20.99;ReadPosRankSum=3.837;VQSLOD=4.1367;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:30.50:0,31,953	1/1:1,6:7:18.06:381,18,0	0/0:71,0:23:30.01:0,30,525	0/0:63,0:13:1.93:0,2,150	1/1:13,18:36:27.57:722,28,0	1/1:3,0:18:41.38:268,41,0	0/1:2,0:8:1.37:30,0,1	0/0:31,0:46:78.26:0,78,2080	1/1:2,14:17:35.96:740,36,0	1/1:12,16:29:51.16:978,51,0	1/1:8,17:25:45.15:821,45,0	1/1:9,1:27:42.99:298,43,0	1/1:5,0:16:28.82:162,29,0	1/1:2,0:18:38.03:233,38,0	1/1:10,26:36:62.99:1142,63,0	1/1:5,18:24:45.15:906,45,0	0/0:24,0:26:48.14:0,48,1367	1/1:11,7:18:8.67:190,9,0	0/0:17,0:16:24.08:0,24,736	0/0:31,0:36:78.25:0,78,2284	0/0:28,0:29:69.22:0,69,1955	1/1:9,2:23:1.93:282,2,0	1/1:1,1:21:46.99:312,47,0	1/1:3,0:13:23.63:152,24,0	1/1:5,16:23:31.87:612,32,0	0/1:29,1:32:0.27:0,0,1775	0/0:29,0:33:85.92:0,86,2604	0/0:7,0:16:36.10:0,36,918
chr10	94294327	.	AAAAACAAAAC	A	12664.54	PASS	AB=0.964;AC=19;AF=0.339;AN=56;BaseQRankSum=14.489;DP=693;FS=4.178;HRun=0;HaplotypeScore=210.3246;InbreedingCoeff=0.9095;MQ=66.12;MQ0=3;MQRankSum=-14.650;QD=52.55;ReadPosRankSum=1.502;VQSLOD=4.1727;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.25:0,72,3638	1/1:0,8:8:21.07:646,21,0	0/0:23,0:18:26.29:0,26,1257	0/0:27,0:18:42.10:0,42,1340	1/1:3,43:46:93:2416,93,0	0/0:29,0:29:72.25:0,72,3635	0/0:17,0:17:45.15:0,45,2272	0/0:29,0:29:60.19:0,60,2720	1/1:4,29:33:63.22:1929,63,0	1/1:1,23:24:60.19:1717,60,0	1/1:2,15:17:35.99:889,36,0	0/0:26,0:26:66.23:0,66,3277	0/0:31,0:31:81.24:0,81,3686	0/0:33,0:33:78.27:0,78,3807	1/1:1,24:25:63.22:1911,63,0	1/1:7,30:37:72.25:2211,72,0	0/0:24,0:24:66.20:0,66,2113	1/1:3,5:8:9.03:277,9,0	0/0:26,0:26:60.21:0,60,2771	0/0:36,0:36:96.33:0,96,4535	0/0:23,0:23:69.22:0,69,3037	0/0:21,0:21:51.16:0,51,2337	0/0:24,0:24:63.18:0,63,2914	0/0:15,0:15:36.12:0,36,1683	1/1:5,11:16:21.07:646,21,0	0/1:26,1:27:23.02:23,0,3164	0/0:33,0:32:93.26:0,93,4188	0/0:7,0:7:21.07:0,21,1065
chr10	94294331	.	AC	A	1380.55	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=17.545;DP=672;FS=3.405;HRun=1;HaplotypeScore=122.3301;InbreedingCoeff=0.2976;MQ=63.46;MQ0=3;MQRankSum=-15.619;QD=6.11;ReadPosRankSum=4.571;VQSLOD=0.9744;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.21:0,78,1011	1/1:8,0:8:17.47:60,17,0	0/0:23,0:17:50.81:0,51,560	0/0:26,0:15:35.84:0,36,462	0/1:44,0:44:99:131,0,144	0/0:28,0:28:84.23:0,84,1102	0/0:17,0:17:51.05:0,51,635	0/0:27,0:27:78.21:0,78,989	0/1:33,0:33:65.85:111,0,66	0/1:24,0:24:37.97:96,0,38	0/1:17,0:17:39.90:40,0,138	0/0:23,0:23:69.22:0,69,922	0/0:32,0:32:93.28:0,93,1246	0/0:32,0:32:96.21:0,96,1186	1/1:25,0:25:16.62:130,17,0	0/1:34,0:34:59.65:133,0,60	1/1:5,17:22:55.75:797,56,0	0/1:7,0:7:12.43:12,0,68	0/0:25,0:25:68.17:0,68,886	0/0:35,0:35:99:0,102,1362	0/0:26,0:26:78:0,78,945	0/0:20,0:20:60.19:0,60,798	0/0:26,0:26:78.06:0,78,940	0/0:15,0:15:45.09:0,45,551	0/1:12,0:12:20.11:40,0,20	0/0:25,0:25:66.08:0,66,955	0/0:32,0:31:96.25:0,96,1259	0/0:7,0:7:21.07:0,21,286
chr10	94296317	.	TTAGGTAA	T	13375.54	PASS	AB=0.952;AC=21;AF=0.375;AN=56;BaseQRankSum=8.060;DP=563;FS=0.332;HRun=0;HaplotypeScore=159.9554;InbreedingCoeff=0.9108;MQ=79.39;MQ0=0;MQRankSum=-17.922;QD=60.52;ReadPosRankSum=1.407;VQSLOD=4.4685;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,10:13:18.06:474,18,0	1/1:0,6:6:15.05:356,15,0	0/0:15,0:15:42.14:0,42,1455	0/0:22,0:21:43.75:0,44,2007	1/1:0,34:34:96.20:2233,96,0	0/0:25,0:25:75.24:0,75,2752	0/0:17,0:17:51.18:0,51,2060	0/0:26,0:26:69.23:0,69,2573	1/1:2,14:16:42.14:1107,42,0	1/1:0,30:30:90.31:2305,90,0	1/1:1,28:29:75.26:1938,75,0	0/0:20,0:20:60.18:0,60,2277	0/0:21,0:21:63.20:0,63,2383	0/0:21,0:21:60.18:0,60,2293	1/1:0,28:28:78.27:2056,78,0	1/1:1,17:18:51.18:1345,51,0	0/0:21,0:21:63.22:0,63,2475	1/1:0,4:4:9.03:237,9,0	0/0:13,0:13:39.13:0,39,1340	0/0:28,0:28:78.25:0,78,2911	0/0:27,0:27:81.28:0,81,3230	0/0:20,0:20:60.21:0,60,2424	0/0:12,0:12:36.12:0,36,1356	0/0:7,0:7:21.07:0,21,848	1/1:2,21:23:51.17:1305,51,0	0/1:19,1:20:18.89:19,0,2127	0/0:40,0:40:99:0,120,4800	0/0:7,0:7:18.06:0,18,727
chr10	94296680	.	CT	C	1732.89	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.334;DP=578;FS=2.636;HRun=1;HaplotypeScore=70.1880;InbreedingCoeff=0.9907;MQ=87.83;MQ0=0;MQRankSum=-1.916;QD=37.67;ReadPosRankSum=-3.314;VQSLOD=2.8532;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:45.15:0,45,704	0/0:5,0:5:15.05:0,15,234	0/0:26,0:26:78.27:0,78,1218	0/0:17,0:17:40.78:0,41,651	0/0:33,0:33:90.28:0,90,1371	0/0:19,0:19:57.19:0,57,891	0/0:16,0:16:39.10:0,39,563	1/1:0,37:37:99:1477,111,0	0/0:13,0:13:36.12:0,36,561	0/0:24,0:24:72.22:0,72,1063	0/0:25,0:25:57.80:0,58,963	0/0:14,0:14:42.13:0,42,636	0/0:16,0:16:45.14:0,45,679	0/0:20,0:20:57.17:0,57,846	0/0:26,0:26:78.27:0,78,1218	0/0:34,0:34:99:0,102,1581	0/0:20,0:20:60.16:0,60,891	0/0:9,0:9:27.09:0,27,413	0/0:21,0:21:60.19:0,60,916	0/0:26,0:26:78.25:0,78,1198	0/0:15,0:15:45.12:0,45,659	0/0:19,0:19:57.17:0,57,848	0/0:21,0:21:57.18:0,57,891	0/0:23,0:23:66.16:0,66,974	0/0:23,0:23:69.22:0,69,1056	0/0:25,0:25:75.26:0,75,1174	0/0:27,0:27:81.23:0,81,1224	1/1:0,9:9:27.09:377,27,0
chr10	94296702	.	GT	G	3051.22	PASS	AB=0.931;AC=17;AF=0.304;AN=56;BaseQRankSum=8.834;DP=603;FS=16.041;HRun=10;HaplotypeScore=71.4134;InbreedingCoeff=0.8970;MQ=83.29;MQ0=0;MQRankSum=-0.832;QD=16.49;ReadPosRankSum=4.303;VQSLOD=2.7613;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:51.09:0,51,536	0/0:5,0:5:12.03:0,12,133	0/0:25,1:23:9.94:0,10,299	0/1:25,2:26:10.06:10,0,348	0/0:22,0:23:56.99:0,57,611	1/1:4,18:22:47.99:417,48,0	1/1:3,16:19:26.99:234,27,0	0/0:37,0:37:90.19:0,90,958	0/0:12,3:15:10.04:0,10,331	0/0:22,2:24:11.03:0,11,555	0/0:23,0:23:66.13:0,66,700	1/1:1,12:13:35.99:312,36,0	1/1:1,15:16:38.98:338,39,0	1/1:2,19:21:41.43:430,41,0	0/0:24,0:24:60.12:0,60,643	0/0:28,1:29:52.15:0,52,792	0/0:22,0:22:53.92:0,54,556	0/0:14,0:14:39.09:0,39,422	0/0:24,0:24:60.16:0,60,664	0/0:26,0:27:66.01:0,66,711	0/0:13,0:13:33.09:0,33,365	1/1:0,20:20:53.98:469,54,0	1/1:1,24:26:65.02:553,65,0	1/1:1,20:21:56.99:495,57,0	0/0:28,1:29:58.48:0,58,858	0/0:20,0:20:48.12:0,48,524	0/0:27,2:29:29.07:0,29,750	0/0:13,0:13:36.05:0,36,372
chr10	94298548	.	GC	G	1407.86	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.823;DP=628;FS=9.001;HRun=1;HaplotypeScore=75.9516;InbreedingCoeff=0.9904;MQ=84.98;MQ0=0;MQRankSum=-1.684;QD=37.05;ReadPosRankSum=-3.284;VQSLOD=2.1514;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:78.24:0,78,1218	0/0:12,0:12:33.11:0,33,523	0/0:17,0:17:51.17:0,51,812	0/0:21,0:21:59.50:0,59,818	0/0:37,0:37:99:0,111,1761	0/0:18,0:18:54.18:0,54,863	0/0:15,0:15:42.14:0,42,671	1/1:0,33:33:96.31:1317,96,0	0/0:20,0:20:60.20:0,60,959	0/0:35,0:35:99:0,105,1659	0/0:31,0:31:93.20:0,93,1382	0/0:18,0:18:54.18:0,54,860	0/0:17,0:17:48.13:0,48,710	0/0:27,0:27:81.26:0,81,1271	0/0:28,0:28:84.29:0,84,1343	0/0:19,0:19:57.19:0,57,911	0/0:18,0:18:54.18:0,54,863	0/0:8,0:8:24.08:0,24,383	0/0:18,0:18:54.18:0,54,848	0/0:40,0:40:99:0,120,1849	0/0:12,0:12:36.12:0,36,570	0/0:27,0:27:81.26:0,81,1270	0/0:23,0:23:68.97:0,69,1066	0/0:11,0:11:33.11:0,33,527	0/0:33,0:33:99:0,99,1469	0/0:24,0:24:72.24:0,72,1130	0/0:35,0:35:99:0,105,1622	1/1:0,5:5:15.05:210,15,0
chr10	94299550	.	G	GA	4218.79	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.928;DP=573;FS=1.639;HRun=0;HaplotypeScore=66.9437;InbreedingCoeff=0.9936;MQ=75.82;MQ0=0;MQRankSum=-1.572;QD=28.13;ReadPosRankSum=2.417;VQSLOD=5.4553;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.25:0,84,1136	0/0:9,0:9:27.09:0,27,377	0/0:14,0:14:41.96:0,42,521	0/0:9,0:9:11.87:0,12,269	0/0:24,0:24:72.24:0,72,1005	1/1:1,26:26:66.19:753,66,0	1/1:3,8:11:27.06:304,27,0	0/0:26,0:26:75.25:0,75,1048	0/0:20,0:20:60.20:0,60,838	0/0:26,0:26:78.26:0,78,1088	0/0:29,0:29:87.25:0,87,1162	1/1:1,17:18:54.13:592,54,0	1/1:0,19:19:41.88:505,42,0	1/1:5,9:15:35.09:367,35,0	0/0:24,0:24:72.24:0,72,1005	0/0:21,0:21:63.21:0,63,875	0/0:21,0:20:59.22:0,59,357	0/0:26,0:26:75.17:0,75,995	0/0:18,0:18:51.15:0,51,681	0/0:19,0:19:57.19:0,57,797	0/0:8,0:8:24.08:0,24,335	1/1:3,21:24:64.58:709,65,0	1/1:3,22:25:67.09:723,67,0	1/1:3,8:11:24.50:265,25,0	0/0:23,0:23:69.23:0,69,964	0/0:34,0:34:99:0,102,1426	0/0:31,0:31:93.30:0,93,1282	0/0:11,0:11:33.11:0,33,461
chr10	94299698	.	CAAG	C	7146.71	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=7.889;DP=655;FS=4.603;HRun=0;HaplotypeScore=104.3286;InbreedingCoeff=0.9997;MQ=73.79;MQ0=0;MQRankSum=-3.806;QD=38.84;ReadPosRankSum=4.376;VQSLOD=6.0997;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.29:0,84,1842	0/0:17,0:17:51.18:0,51,1139	0/0:15,0:15:36.04:0,36,684	0/0:11,0:11:27.09:0,27,552	0/0:26,0:26:75.25:0,75,1603	1/1:0,25:25:60.12:921,60,0	1/1:1,21:22:60.12:920,60,0	0/0:39,0:39:99:0,105,2284	0/0:22,0:22:63.22:0,63,1406	0/0:29,0:29:84.29:0,84,1849	0/0:33,0:33:96.33:0,96,2127	1/1:1,27:28:63.22:1028,63,0	1/1:1,25:26:66.18:1047,66,0	1/1:0,14:14:32.82:538,33,0	0/0:27,0:27:81.28:0,81,1806	0/0:25,0:25:72.25:0,72,1594	0/0:22,0:22:66.23:0,66,1474	0/0:13,0:13:33.11:0,33,737	0/0:20,0:20:57.18:0,57,1210	0/0:19,0:19:57.20:0,57,1258	0/0:23,0:23:66.23:0,66,1471	1/1:2,17:19:45.15:735,45,0	1/1:0,29:28:75.26:1224,75,0	1/1:1,20:21:45.15:734,45,0	0/0:22,0:22:66.21:0,66,1394	0/0:39,0:39:99:0,117,2595	0/0:27,0:27:78.27:0,78,1722	0/0:12,0:12:33.09:0,33,672
chr10	94300946	.	GACACACACACACACACAC	G	10453.25	PASS	AB=0.706;AC=17;AF=0.304;AN=56;BaseQRankSum=10.924;DP=741;FS=8.605;HRun=0;HaplotypeScore=299.4825;InbreedingCoeff=0.8891;MQ=60.13;MQ0=5;MQRankSum=-9.716;QD=41.32;ReadPosRankSum=5.973;VQSLOD=2.0670;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:51:15.03:0,15,454	0/0:7,0:14:20.33:0,20,819	0/0:32,0:24:18.49:0,18,391	0/0:32,0:23:33.04:0,33,935	0/0:10,0:20:20.94:0,21,856	1/1:13,19:32:24.08:1168,24,0	1/1:15,17:32:15.02:736,15,0	0/0:17,0:16:14.26:0,14,666	0/0:10,0:21:27.56:0,28,1252	0/0:27,0:28:69.22:0,69,3599	0/0:7,0:17:10.86:0,11,356	1/1:12,21:34:33.11:1577,33,0	1/1:4,27:32:39.03:1869,39,0	1/1:6,21:27:39.13:1872,39,0	0/0:16,0:44:33.43:0,33,1329	0/0:12,0:27:15.02:0,15,867	0/1:14,0:24:39.64:40,0,149	0/0:16,0:17:35.90:0,36,1529	0/0:17,0:19:42.14:0,42,2410	0/0:27,0:29:63.18:0,63,3652	0/0:43,0:47:96.11:0,96,5697	1/1:6,24:31:30.10:1450,30,0	1/1:2,15:17:24.08:1153,24,0	1/1:12,12:24:12.04:589,12,0	0/0:10,0:22:21.07:0,21,1096	0/0:24,0:27:60.20:0,60,3188	0/0:14,0:15:36.59:0,37,2343	0/0:8,0:8:24.08:0,24,1252
chr10	94301449	.	CTCAT	C	1898.55	PASS	AB=0.963;AC=9;AF=0.161;AN=56;BaseQRankSum=7.683;DP=662;FS=6.563;HRun=0;HaplotypeScore=151.5057;InbreedingCoeff=0.0343;MQ=57.74;MQ0=4;MQRankSum=1.139;QD=9.69;ReadPosRankSum=-4.128;VQSLOD=1.6413;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.18:0,69,1560	0/0:11,0:11:33.11:0,33,794	0/0:21,0:16:37.76:0,38,765	0/0:12,0:9:21.07:0,21,440	0/0:27,0:27:72.21:0,72,1558	0/1:27,1:28:99:403,0,163	0/1:17,0:17:99:158,0,221	0/0:40,0:40:99:0,99,2180	0/0:19,0:19:54.15:0,54,1157	0/0:19,0:19:51.17:0,51,1200	0/0:26,0:26:78.24:0,78,1751	0/1:17,3:20:61.22:436,0,61	0/1:37,1:38:99:334,0,329	0/1:33,1:34:1.34:1,0,281	0/0:40,0:40:99:0,105,2484	0/0:26,0:26:75.25:0,75,1830	0/0:21,0:21:52.47:0,52,807	0/0:12,0:12:33.04:0,33,668	0/0:18,0:18:45.15:0,45,923	0/0:27,0:27:81.27:0,81,1949	0/0:26,0:26:69.24:0,69,1585	0/1:20,0:20:99:149,0,152	0/1:24,1:25:99:320,0,106	1/1:13,1:14:4.55:231,5,0	0/0:21,0:21:51.17:0,51,1162	0/0:27,0:27:78.24:0,78,1753	0/0:34,0:34:90.27:0,90,1954	0/0:15,0:15:39.12:0,39,892
chr10	94301453	.	T	TTCAC	7100.84	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.927;DP=678;FS=30.127;HRun=0;HaplotypeScore=140.9965;InbreedingCoeff=0.9970;MQ=58.41;MQ0=3;MQRankSum=-10.712;QD=34.98;ReadPosRankSum=0.173;VQSLOD=3.1825;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.18:0,72,1224	0/0:11,0:11:33.11:0,33,620	0/0:23,0:19:40.53:0,41,625	0/0:12,0:9:17.24:0,17,376	0/0:28,0:28:75.22:0,75,1301	1/1:23,6:29:71.85:968,72,0	1/1:13,7:20:54:838,54,0	0/0:38,0:38:99:0,111,1862	0/0:20,0:20:60.15:0,60,978	0/0:20,0:20:54.16:0,54,956	0/0:26,0:26:78.24:0,78,1374	1/1:18,3:21:47.55:559,48,0	1/1:22,16:38:98.56:1599,99,0	1/1:2,34:36:48.06:1107,48,0	0/0:38,0:38:99:0,108,1993	0/0:26,0:26:75.25:0,75,1377	0/0:24,0:24:39.52:0,40,549	0/0:12,0:12:33.04:0,33,556	0/0:18,0:18:48.15:0,48,842	0/0:27,0:27:81.26:0,81,1488	0/0:29,0:29:81.22:0,81,1400	1/1:0,21:21:50.91:905,51,0	1/1:13,12:25:65.75:897,66,0	1/1:9,4:13:18.26:229,18,0	0/0:23,0:23:69.16:0,69,1092	0/0:27,0:27:78.24:0,78,1379	0/0:34,0:34:96.27:0,96,1618	0/0:14,0:14:42.12:0,42,732
chr10	94301526	.	G	GCATA	6995.75	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=8.889;DP=723;FS=5.028;HRun=0;HaplotypeScore=140.6067;InbreedingCoeff=0.9835;MQ=58.58;MQ0=1;MQRankSum=-6.854;QD=42.92;ReadPosRankSum=-0.712;VQSLOD=4.6193;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:69.48:0,69,1130	0/0:12,0:12:30.06:0,30,454	0/0:16,0:10:21.05:0,21,286	0/0:17,0:11:12.60:0,13,119	0/0:27,0:27:63.17:0,63,991	1/1:13,10:23:54.17:1192,54,0	1/1:7,3:10:12.02:241,12,0	0/0:39,0:38:69.08:0,69,1028	0/0:26,0:26:72.23:0,72,1187	0/0:32,0:32:84.28:0,84,1408	0/0:32,0:32:78.25:0,78,1299	1/1:11,17:28:66.19:1448,66,0	1/1:12,16:28:63.13:1412,63,0	1/1:15,14:29:48.16:1138,48,0	0/0:34,0:34:78.17:0,78,1187	0/0:31,0:31:75.26:0,75,1275	0/0:18,0:18:32.08:0,32,535	0/0:23,0:23:34.07:0,34,783	0/0:27,0:26:57.09:0,57,855	0/0:32,0:32:84.25:0,84,1398	0/0:33,0:32:71.85:0,72,1151	1/1:9,8:17:27.09:619,27,0	1/1:8,9:17:39.07:773,39,0	1/1:9,2:11:11.65:173,12,0	0/0:35,0:35:93.29:0,93,1523	0/0:40,0:40:99:0,99,1639	0/0:38,0:38:99:0,102,1642	0/0:16,0:16:30.04:0,30,424
chr10	94301555	.	A	AT	4535.86	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=7.344;DP=622;FS=2.804;HRun=5;HaplotypeScore=85.4990;InbreedingCoeff=0.9889;MQ=66.13;MQ0=1;MQRankSum=-7.712;QD=31.72;ReadPosRankSum=-2.290;VQSLOD=4.3947;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.17:0,69,737	0/0:12,0:12:36.09:0,36,387	0/0:14,0:14:36.06:0,36,366	0/0:10,0:6:8.40:0,8,115	0/0:25,0:25:69.17:0,69,741	1/1:2,18:21:54.18:710,54,0	1/1:0,8:8:24.03:290,24,0	0/0:39,0:39:99:0,99,1057	0/0:19,0:19:51.12:0,51,548	0/0:33,0:33:96.24:0,96,1032	0/0:32,0:32:90.23:0,90,967	1/1:2,18:20:51.17:670,51,0	1/1:7,15:22:39.13:513,39,0	1/1:5,15:21:54.17:691,54,0	0/0:29,0:29:81.20:0,81,871	0/0:28,0:28:75.17:0,75,798	1/1:0,15:15:36.12:473,36,0	0/0:19,0:19:51.09:0,51,533	0/0:27,0:27:48.17:0,48,688	0/0:34,0:34:90.22:0,90,966	0/0:21,0:20:54.12:0,54,571	1/1:0,11:11:33.11:434,33,0	1/1:3,13:16:35.70:444,36,0	1/1:1,8:9:24.07:312,24,0	0/0:30,0:30:81.19:0,81,862	0/0:37,0:37:99:0,99,1064	0/0:32,0:32:93.23:0,93,999	0/0:13,0:13:36.09:0,36,386
chr10	94303209	.	CGGCCAAAGGAA	C	1303.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.692;DP=657;FS=2.343;HRun=0;HaplotypeScore=206.6784;InbreedingCoeff=0.9988;MQ=86.10;MQ0=0;MQRankSum=-6.117;QD=65.19;ReadPosRankSum=0.938;VQSLOD=3.6952;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,169,8772	0/0:10,0:10:30.10:0,30,1628	0/0:22,0:23:63.16:0,63,2783	0/0:23,0:22:57.19:0,57,2423	0/0:13,0:13:39.13:0,39,2188	0/0:21,0:21:57.20:0,57,2955	0/0:24,0:24:72.25:0,72,3896	0/0:29,0:29:84.25:0,84,4053	0/0:21,0:21:63.22:0,63,3581	0/0:26,0:26:78.26:0,78,4175	0/0:25,0:25:69.24:0,69,3763	0/0:30,0:30:90.31:0,90,4759	0/0:29,0:29:87.30:0,87,4546	0/0:29,0:29:87.30:0,87,4980	0/0:27,0:27:81.28:0,81,4610	0/0:22,0:22:66.23:0,66,3622	1/1:4,16:20:38.69:1399,39,0	0/0:24,0:24:72.21:0,72,3984	0/0:17,0:17:51.18:0,51,2491	0/0:19,0:19:57.18:0,57,3047	0/0:29,0:29:81.23:0,81,4197	0/0:10,0:10:30.09:0,30,1599	0/0:22,0:22:63.22:0,63,3281	0/0:35,0:35:99:0,102,5706	0/0:13,0:13:39.13:0,39,2119	0/0:16,0:16:48.16:0,48,2583	0/0:27,0:26:81.28:0,81,4407	0/0:16,0:16:48.16:0,48,2777
chr10	94303584	.	G	GAA	2915.67	PASS	AB=0.714;AC=17;AF=0.304;AN=56;BaseQRankSum=1.252;DP=605;FS=8.546;HRun=13;HaplotypeScore=94.1689;InbreedingCoeff=0.8005;MQ=61.13;MQ0=9;MQRankSum=-9.319;QD=17.89;ReadPosRankSum=1.721;VQSLOD=2.5705;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:46.82:0,47,707	0/0:12,0:11:29.50:0,29,312	0/0:26,0:17:0.64:0,1,89	0/0:37,0:13:9.08:0,9,90	0/0:34,0:34:78.29:0,78,868	1/1:11,20:30:42.20:713,42,0	1/1:10,8:16:36.18:534,36,0	0/0:21,0:20:48.09:0,48,583	0/0:12,0:12:23.97:0,24,277	0/0:28,0:27:43.59:0,44,737	0/0:22,0:22:56.58:0,57,579	1/1:6,9:16:8.22:252,8,0	1/1:18,8:26:57.65:685,58,0	1/1:8,11:19:21.16:357,21,0	0/0:29,0:29:33.62:0,34,412	0/0:24,0:24:35.84:0,36,433	1/1:16,0:14:1.89:5,2,0	0/0:25,0:25:28.55:0,29,342	0/0:19,0:19:41.88:0,42,492	0/0:30,0:29:80.98:0,81,999	0/0:3,0:3:6.02:0,6,75	0/1:6,4:10:14.85:182,0,15	1/1:9,11:21:16.36:274,16,0	1/1:3,3:6:9.09:105,9,0	0/0:28,0:28:47.83:0,48,504	0/0:24,0:23:59.45:0,59,711	0/0:29,0:29:78:0,78,929	0/0:9,0:7:21.05:0,21,247
chr10	94303590	.	G	GAA	995.98	PASS	AB=0.960;AC=12;AF=0.214;AN=56;BaseQRankSum=10.297;DP=612;FS=29.383;HRun=5;HaplotypeScore=103.4308;InbreedingCoeff=0.3332;MQ=60.43;MQ0=9;MQRankSum=-10.747;QD=5.13;ReadPosRankSum=3.288;VQSLOD=-0.6943;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:46.45:0,46,708	0/0:12,0:11:29.99:0,30,360	0/0:25,0:16:19.90:0,20,156	0/1:43,0:15:8.48:8,0,164	0/0:32,0:32:73.46:0,73,913	1/1:29,0:28:10.15:199,10,0	0/1:19,0:17:63.37:178,0,63	0/0:23,0:22:54.16:0,54,667	0/0:10,0:10:21.07:0,21,266	0/0:31,0:30:82.28:0,82,977	0/0:22,0:22:51.16:0,51,641	0/1:14,2:16:23.50:87,0,24	0/1:28,0:28:66.28:286,0,66	0/1:19,2:21:8.47:158,0,8	0/0:27,0:27:36.71:0,37,398	0/0:22,0:22:36.11:0,36,459	0/0:17,0:15:21.25:0,21,253	0/0:23,0:23:39.09:0,39,470	0/0:19,0:19:48.61:0,49,599	0/0:33,0:32:84.25:0,84,1060	0/0:4,0:4:9.03:0,9,114	1/1:9,1:10:12.54:110,13,0	0/1:21,1:22:37.23:88,0,37	1/1:5,1:6:6.34:40,6,0	0/0:29,0:29:57.18:0,57,721	0/0:25,0:24:66.15:0,66,783	0/0:29,0:29:81.25:0,81,1018	0/0:12,0:10:27.05:0,27,315
chr10	94304239	.	A	AT	2606.02	PASS	AB=0.950;AC=22;AF=0.393;AN=56;BaseQRankSum=-2.421;DP=542;FS=1.404;HRun=0;HaplotypeScore=99.5648;InbreedingCoeff=0.4499;MQ=77.76;MQ0=7;MQRankSum=0.078;QD=11.43;ReadPosRankSum=1.213;VQSLOD=4.0727;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:17.65:25,0,18	0/0:6,0:6:9.13:0,9,35	0/0:50,0:23:47.73:0,48,400	0/0:38,0:16:8.44:0,8,237	0/1:31,0:31:57.99:58,0,73	1/1:2,23:25:66.16:756,66,0	0/1:2,4:6:6.33:88,0,6	0/0:33,0:32:81.99:0,82,406	0/1:15,0:15:28.95:40,0,29	0/1:23,0:23:0.97:1,0,59	0/0:25,0:25:17.19:0,17,71	1/1:0,16:16:29.12:322,29,0	1/1:1,16:17:45.12:519,45,0	1/1:0,5:5:9.03:109,9,0	0/1:11,0:11:0.95:19,0,1	0/1:14,0:14:6.10:6,0,24	0/0:28,0:28:56.58:0,57,284	0/1:18,0:18:11.25:11,0,19	0/0:19,0:19:54.08:0,54,697	0/0:18,0:18:51.14:0,51,643	0/0:5,0:5:15.05:0,15,207	1/1:0,9:9:23.82:226,24,0	1/1:1,13:14:36.02:406,36,0	1/1:2,7:9:15.29:210,15,0	0/0:27,0:27:5.19:0,5,68	0/0:31,0:31:93.28:0,93,1238	0/0:30,0:30:87.27:0,87,1190	0/0:4,0:4:8.63:0,9,45
chr10	94304240	.	A	ATT	7273.99	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=7.673;DP=544;FS=1.657;HRun=5;HaplotypeScore=94.0119;InbreedingCoeff=0.9073;MQ=77.73;MQ0=7;MQRankSum=-3.444;QD=23.02;ReadPosRankSum=3.314;VQSLOD=2.6235;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:40.95:315,41,0	0/1:6,0:6:1.55:57,0,2	0/0:50,0:23:20.89:0,21,349	0/0:37,0:16:20.77:0,21,257	1/1:31,0:31:69.59:546,70,0	1/1:23,2:25:66.20:814,66,0	1/1:7,0:7:9.91:110,10,0	0/0:33,1:33:57.13:0,57,328	1/1:15,0:15:37.45:311,37,0	1/1:22,0:22:47.68:357,48,0	1/1:25,0:25:60.91:401,61,0	1/1:16,0:16:28.90:336,29,0	1/1:15,0:16:45.10:527,45,0	1/1:5,0:5:9.03:112,9,0	1/1:12,0:12:29.43:225,29,0	1/1:14,0:14:35.71:272,36,0	1/1:2,26:28:69.24:1168,69,0	1/1:19,0:19:47.02:323,47,0	0/0:19,0:19:51.14:0,51,623	0/0:18,0:18:51.12:0,51,606	0/0:5,0:5:15.05:0,15,191	1/1:10,0:10:26.66:263,27,0	1/1:13,1:14:36.10:420,36,0	1/1:9,0:9:21.05:245,21,0	1/1:27,0:27:67.51:470,68,0	0/0:31,0:31:90.27:0,90,1130	0/0:30,0:30:87.27:0,87,1093	0/0:4,0:4:3.76:0,4,28
chr10	94304503	.	GT	G	2643.59	PASS	AB=0.784;AC=38;AF=0.679;AN=56;BaseQRankSum=7.337;DP=495;FS=7.133;HRun=15;HaplotypeScore=107.8273;InbreedingCoeff=0.6623;MQ=69.02;MQ0=1;MQRankSum=-3.274;QD=7.45;ReadPosRankSum=3.460;VQSLOD=2.6713;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,10:23:71.57:119,0,72	1/1:2,0:9:12.19:35,12,0	0/1:21,0:11:6.47:6,0,51	0/0:19,0:11:8.13:0,8,55	1/1:9,0:20:20.60:62,21,0	1/1:5,19:25:60.84:388,61,0	1/1:6,8:14:20.62:134,21,0	0/1:6,8:15:4.87:80,0,5	1/1:5,0:13:14.24:41,14,0	1/1:6,0:20:28.48:83,28,0	1/1:6,0:19:24.40:71,24,0	1/1:6,12:18:44.21:288,44,0	1/1:6,18:24:53.07:345,53,0	1/1:4,17:21:49.98:326,50,0	1/1:4,0:17:24.40:71,24,0	1/1:1,0:18:32.58:94,33,0	0/0:29,0:29:52.19:0,52,234	1/1:3,0:11:16.27:47,16,0	0/0:13,1:15:13.28:0,13,211	0/0:8,0:15:21.24:0,21,190	0/0:10,0:10:20.97:0,21,178	1/1:2,6:8:17.62:115,18,0	1/1:3,8:11:15.61:159,16,0	1/1:8,15:23:44.15:285,44,0	1/1:5,0:20:26.42:76,26,0	0/0:20,0:22:25.98:0,26,242	0/0:26,3:29:5.02:0,5,383	0/1:4,1:5:11.08:13,0,11
chr10	94304506	.	T	TTG	1388.85	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-1.491;DP=512;FS=6.734;HRun=0;HaplotypeScore=132.4469;InbreedingCoeff=0.7400;MQ=67.94;MQ0=1;MQRankSum=3.635;QD=7.98;ReadPosRankSum=6.022;VQSLOD=2.7115;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:68.98:0,69,699	0/0:10,0:10:26.98:0,27,242	0/0:23,0:12:23.40:0,23,245	0/0:19,0:11:16.40:0,16,172	0/0:22,0:22:56.86:0,57,504	1/1:27,0:27:21.82:158,22,0	1/1:11,0:11:14.30:71,14,0	0/0:16,0:16:42.04:0,42,422	0/0:13,0:13:30.02:0,30,274	0/0:19,0:19:44.13:0,44,490	0/0:20,0:20:53.99:0,54,493	0/1:19,0:19:18.31:46,0,18	0/1:26,0:26:2.14:90,0,2	1/1:23,0:23:30.73:151,31,0	0/0:18,0:18:54.02:0,54,493	0/0:19,0:19:41.32:0,41,468	1/1:1,27:28:57.19:881,57,0	0/0:14,0:14:36.02:0,36,330	0/0:16,0:16:47.33:0,47,524	0/0:16,0:16:47.67:0,48,443	0/0:10,0:10:27.06:0,27,333	0/1:8,0:8:3.22:28,0,3	1/1:12,0:12:0.25:18,0,0	1/1:20,0:20:23.75:129,24,0	0/0:19,0:19:51.05:0,51,475	0/0:23,0:23:63.01:0,63,710	0/0:27,0:26:81.02:0,81,922	0/0:6,0:6:13.82:0,14,112
chr10	94304546	.	GTTTA	G	2871.26	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=1.458;DP=459;FS=6.870;HRun=0;HaplotypeScore=142.5262;InbreedingCoeff=0.8503;MQ=52.38;MQ0=4;MQRankSum=-1.236;QD=18.52;ReadPosRankSum=2.787;VQSLOD=3.1037;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:59.87:0,60,1055	0/0:8,0:9:18.05:0,18,290	0/0:11,0:5:2.98:0,3,21	0/0:8,0:6:3.41:0,3,19	0/0:8,0:23:51.05:0,51,729	1/1:10,18:28:30.10:492,30,0	1/1:9,2:11:14.96:149,15,0	0/0:27,0:27:51.03:0,51,720	0/0:7,0:9:15.05:0,15,294	0/0:12,0:20:48.11:0,48,836	0/0:16,0:22:48.54:0,49,757	1/1:3,16:19:30.10:495,30,0	1/1:16,11:27:53.93:728,54,0	1/1:8,17:25:36.12:591,36,0	0/0:13,0:16:27.08:0,27,457	0/0:11,0:16:33.09:0,33,509	0/0:18,0:18:15.99:0,16,420	0/0:16,0:19:36.11:0,36,621	0/0:15,0:14:27.05:0,27,528	0/0:8,0:8:18.01:0,18,340	0/0:3,0:3:6:0,6,97	1/1:0,8:8:9.03:148,9,0	1/1:4,13:17:14.73:247,15,0	1/1:7,13:20:1.17:215,1,0	0/0:10,0:14:33.11:0,33,581	0/0:20,0:20:42.14:0,42,892	0/0:18,0:18:45.15:0,45,1004	0/0:0,0:2:6.02:0,6,104
chr10	94304844	.	AT	A	977.77	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=5.149;DP=442;FS=0.633;HRun=8;HaplotypeScore=48.3608;InbreedingCoeff=0.7190;MQ=69.02;MQ0=0;MQRankSum=-0.906;QD=22.74;ReadPosRankSum=2.299;VQSLOD=3.9871;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.17:0,54,652	0/0:8,0:8:24.04:0,24,273	0/0:12,0:11:27.02:0,27,294	./.	0/0:19,0:19:45.12:0,45,531	0/0:15,0:15:27.45:0,27,96	0/0:10,0:10:13.72:0,14,47	0/0:25,0:25:63.19:0,63,760	0/0:13,0:13:36.11:0,36,434	0/0:26,0:26:75.23:0,75,906	0/0:24,0:24:72.18:0,72,853	0/0:8,0:8:17.47:0,17,61	0/0:14,0:14:5.09:0,5,64	0/0:9,0:9:9.98:0,10,35	0/0:18,0:18:54.17:0,54,650	0/0:18,0:18:42.13:0,42,507	1/1:2,41:43:99:1072,111,0	0/0:17,0:16:48.15:0,48,580	0/0:23,0:23:57.17:0,57,678	0/0:15,0:15:36.11:0,36,435	0/0:11,0:11:30.08:0,30,350	0/0:2,0:1:2.50:0,2,9	0/0:11,0:11:21.50:0,22,73	0/0:6,0:6:13.76:0,14,46	0/0:21,0:21:57.17:0,57,689	0/0:17,0:17:48.13:0,48,567	0/0:26,0:26:72.21:0,72,857	0/0:10,0:10:21.02:0,21,237
chr10	94304845	.	T	TA	2191.86	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=-7.008;DP=439;FS=15.204;HRun=1;HaplotypeScore=42.3752;InbreedingCoeff=0.9599;MQ=70.08;MQ0=0;MQRankSum=-0.785;QD=28.84;ReadPosRankSum=2.569;VQSLOD=1.9644;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.14:0,63,824	0/0:8,0:8:24.05:0,24,313	0/0:12,0:11:27.04:0,27,336	./.	0/0:20,0:20:54.06:0,54,673	1/1:0,14:14:33.11:482,33,0	1/1:0,10:10:18.06:263,18,0	0/0:24,0:24:72.22:0,72,962	0/0:12,0:12:36.12:0,36,488	0/0:26,0:26:78.25:0,78,1066	0/0:24,0:24:72.20:0,72,981	1/1:0,8:8:21.07:307,21,0	1/1:1,13:14:33.09:462,33,0	1/1:1,9:10:12.03:176,12,0	0/0:18,0:18:54.18:0,54,734	0/0:17,0:17:48.15:0,48,635	0/0:43,0:43:99:0,110,523	0/0:17,0:16:48.16:0,48,669	0/0:22,0:22:66.17:0,66,851	0/0:15,0:15:42.12:0,42,541	0/0:11,0:11:33.09:0,33,428	1/1:1,2:2:3.01:44,3,0	1/1:0,11:11:27.09:394,27,0	1/1:0,6:6:18.06:262,18,0	0/0:21,0:21:63.19:0,63,847	0/0:17,0:17:51.16:0,51,677	0/0:26,0:26:75.23:0,75,1013	0/0:8,0:8:24.03:0,24,296
chr10	94305226	.	T	TAA	5641.13	PASS	AB=0.536;AC=36;AF=0.643;AN=56;BaseQRankSum=0.448;DP=454;FS=6.918;HRun=10;HaplotypeScore=63.6261;InbreedingCoeff=0.8173;MQ=77.24;MQ0=1;MQRankSum=1.478;QD=19.25;ReadPosRankSum=2.404;VQSLOD=3.4151;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:22:33.90:126,34,0	1/1:0,6:7:18.05:252,18,0	0/0:12,0:11:5.85:0,6,139	0/0:14,1:15:6.87:0,7,154	1/1:6,18:26:56.53:738,57,0	1/1:1,0:16:34.93:123,35,0	0/1:1,0:9:12.54:35,0,13	0/0:34,0:34:62.99:0,63,626	1/1:3,9:14:23.56:306,24,0	1/1:0,19:22:62.12:800,62,0	1/1:2,16:18:48.11:672,48,0	1/1:3,0:12:24.01:83,24,0	0/1:2,0:13:2.21:60,0,2	1/1:0,0:18:37.31:131,37,0	1/1:0,14:14:33.11:490,33,0	1/1:2,16:18:45.15:671,45,0	1/1:3,1:28:20.43:172,20,0	1/1:5,11:16:24:330,24,0	0/0:19,0:19:39.07:0,39,396	0/0:25,0:25:54.43:0,54,602	0/0:11,0:11:21:0,21,207	1/1:3,0:7:7.96:37,8,0	1/1:1,0:8:12.13:43,12,0	1/1:0,0:9:19.96:70,20,0	1/1:0,14:15:35.61:501,36,0	0/0:18,0:18:45.09:0,45,457	0/0:21,0:21:60.13:0,60,610	0/0:5,0:5:8.99:0,9,92
chr10	94305530	.	GTTTTT	G	2266.58	PASS	AB=0.550;AC=15;AF=0.268;AN=56;BaseQRankSum=2.819;DP=522;FS=6.530;HRun=18;HaplotypeScore=109.4554;InbreedingCoeff=0.8529;MQ=72.27;MQ0=4;MQRankSum=-0.971;QD=21.79;ReadPosRankSum=5.813;VQSLOD=0.7361;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:16:39.05:0,39,583	0/0:1,0:2:3.01:0,3,51	0/0:40,0:15:9.76:0,10,193	0/0:21,0:16:29.51:0,30,364	0/0:17,0:23:56.28:0,56,851	1/1:4,15:21:20.20:576,20,0	0/1:2,7:11:4.98:110,0,5	0/0:17,0:29:39.35:0,39,298	0/0:15,0:16:36.11:0,36,577	0/0:10,0:11:24.06:0,24,388	0/0:14,0:23:48.15:0,48,767	1/1:2,4:7:17.42:221,17,0	1/1:6,10:18:41.94:573,42,0	1/1:4,8:12:14.83:217,15,0	0/0:13,0:23:58.09:0,58,873	0/0:11,0:16:35.96:0,36,711	0/0:10,0:25:57.12:0,57,633	0/0:15,0:24:48.13:0,48,672	0/0:21,0:24:60.15:0,60,1111	0/0:20,0:25:69.24:0,69,1418	0/0:5,0:7:13.60:0,14,274	1/1:2,7:9:8.52:130,9,0	1/1:6,5:13:20.67:275,21,0	1/1:3,9:13:6.57:354,7,0	0/0:16,0:24:33.11:0,33,624	0/0:18,0:21:51.14:0,51,834	0/0:35,0:39:81.27:0,81,1586	0/0:1,0:6:14.60:0,15,91
chr10	94305966	.	T	TA	3692.73	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-12.647;DP=559;FS=1.320;HRun=7;HaplotypeScore=51.4598;InbreedingCoeff=0.9937;MQ=75.77;MQ0=0;MQRankSum=-1.020;QD=28.63;ReadPosRankSum=3.249;VQSLOD=4.1942;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:84.13:0,84,811	0/0:7,0:7:21.03:0,21,203	0/0:16,0:16:48.08:0,48,462	0/0:11,0:11:18.03:0,18,173	0/0:35,0:35:99:0,105,1014	1/1:2,20:22:48.15:580,48,0	1/1:0,16:16:42.13:507,42,0	0/0:42,0:42:99:0,108,1035	0/0:17,0:17:42.06:0,42,406	0/0:28,0:28:78.12:0,78,753	0/0:21,0:21:51.06:0,51,488	1/1:1,16:17:45.14:544,45,0	1/1:1,12:13:33.10:399,33,0	1/1:4,16:20:42.13:507,42,0	0/0:16,0:16:42.06:0,42,405	0/0:18,0:18:51.08:0,51,492	0/0:16,0:16:42.03:0,42,393	0/0:16,0:14:45.07:0,45,435	0/0:28,0:28:84.12:0,84,806	0/0:25,0:25:72.11:0,72,695	0/0:9,0:9:27.03:0,27,255	1/1:2,13:15:39.12:467,39,0	1/1:1,17:18:39.12:471,39,0	1/1:1,7:8:18.06:217,18,0	0/0:26,0:26:66.10:0,66,637	0/0:23,0:23:66.09:0,66,633	0/0:36,0:34:96.10:0,96,912	0/0:7,0:7:15.02:0,15,145
chr10	94306391	.	AAG	A	6312.55	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=14.022;DP=643;FS=1.545;HRun=0;HaplotypeScore=120.9012;InbreedingCoeff=0.9996;MQ=76.03;MQ0=1;MQRankSum=-3.494;QD=37.13;ReadPosRankSum=2.973;VQSLOD=6.7589;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.28:0,81,1516	0/0:9,0:9:24.08:0,24,449	0/0:15,0:15:44.98:0,45,762	0/0:30,0:30:81.28:0,81,1460	0/0:18,0:18:54.19:0,54,1011	1/1:1,18:19:48.16:707,48,0	1/1:2,21:23:54.18:795,54,0	0/0:35,0:35:99:0,102,1789	0/0:27,0:27:78.27:0,78,1448	0/0:26,0:26:78.27:0,78,1453	0/0:14,0:14:39.13:0,39,730	1/1:0,16:16:39.13:573,39,0	1/1:0,27:27:72.24:1059,72,0	1/1:1,26:26:66.22:971,66,0	0/0:34,0:34:99:0,99,1850	0/0:15,0:15:45.15:0,45,825	0/0:44,0:44:99:0,129,2381	0/0:24,0:24:66.23:0,66,1223	0/0:24,0:24:69.24:0,69,1252	0/0:20,0:20:60.21:0,60,1117	0/0:37,0:37:99:0,108,1942	1/1:3,21:24:60.20:883,60,0	1/1:1,14:15:42.14:618,42,0	1/1:0,19:19:48.16:706,48,0	0/0:24,0:24:72.25:0,72,1331	0/0:23,0:23:66.22:0,66,1207	0/0:23,0:23:69.24:0,69,1287	./.
chr10	94306542	.	C	CAA	7451.73	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-3.675;DP=259;FS=13.733;HRun=1;HaplotypeScore=217.4451;InbreedingCoeff=-0.0039;MQ=51.27;MQ0=3;MQRankSum=-1.110;QD=30.54;ReadPosRankSum=-1.174;VQSLOD=2.5773;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:29.31:436,29,0	0/1:4,0:4:13.21:70,0,13	0/1:9,0:5:19.12:19,0,34	0/0:13,1:6:9.71:0,10,81	1/1:10,0:10:23.26:282,23,0	0/1:15,0:14:15.75:407,0,16	1/1:10,0:9:3.71:277,4,0	1/1:11,0:11:30.10:444,30,0	1/1:15,4:19:35.54:598,36,0	1/1:12,0:12:10.72:336,11,0	1/1:3,0:3:9.03:121,9,0	1/1:6,2:8:0.39:277,0,0	1/1:9,2:11:27.09:453,27,0	0/1:11,0:11:13.98:353,0,14	1/1:17,0:17:14.45:496,14,0	0/1:5,0:5:18.61:67,0,19	1/1:8,0:8:18.06:296,18,0	1/1:7,0:7:17.99:231,18,0	1/1:6,0:6:10.85:140,11,0	1/1:5,0:5:14.40:181,14,0	1/1:11,0:10:27.05:383,27,0	1/1:4,0:4:8.55:74,9,0	1/1:8,0:8:24.07:326,24,0	1/1:4,2:6:6.02:105,6,0	0/1:7,0:7:2:279,0,2	1/1:11,3:14:31.60:458,32,0	0/1:12,0:12:30.26:295,0,30	1/1:1,0:1:3.01:47,3,0
chr10	94307510	.	G	GGAA	568.69	PASS	AB=0.961;AC=10;AF=0.192;AN=52;BaseQRankSum=6.253;DP=348;FS=2.177;HRun=0;HaplotypeScore=172.9917;InbreedingCoeff=-0.1319;MQ=37.78;MQ0=1;MQRankSum=-0.966;QD=4.37;ReadPosRankSum=-2.550;VQSLOD=2.6573;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:10:7.29:7,0,90	0/0:3,0:3:6.02:0,6,115	1/1:9,0:3:0.30:2,0,0	./.	0/0:15,0:13:7.79:0,8,102	0/1:19,0:19:99:195,0,229	0/1:16,3:19:99:125,0,244	0/0:13,0:10:24.07:0,24,340	0/0:19,0:18:43.36:0,43,624	0/0:21,0:20:33.37:0,33,466	0/0:15,0:15:9.26:0,9,95	0/1:10,0:10:28.64:29,0,173	0/1:14,1:15:20.84:21,0,341	0/1:16,1:16:99:116,0,269	0/0:15,0:15:26.80:0,27,312	0/0:12,0:12:30.06:0,30,454	./.	0/0:6,0:6:16.66:0,17,220	0/0:12,0:12:26.63:0,27,323	0/0:13,0:13:14.12:0,14,162	0/0:7,0:8:7.77:0,8,92	0/1:14,0:13:31.39:130,0,31	0/1:15,1:16:75.20:75,0,81	0/0:7,0:7:14.98:0,15,206	0/0:24,0:23:36.81:0,37,732	0/0:14,0:11:33.09:0,33,500	0/0:6,0:6:18.06:0,18,303	0/0:7,0:7:15.01:0,15,210
chr10	94307552	.	GAAGAAA	G	2447.41	PASS	AB=0.968;AC=20;AF=0.357;AN=56;BaseQRankSum=6.725;DP=454;FS=3.237;HRun=0;HaplotypeScore=159.8496;InbreedingCoeff=-0.0900;MQ=41.53;MQ0=10;MQRankSum=-7.585;QD=9.64;ReadPosRankSum=-0.712;VQSLOD=2.8060;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:61.22:61,0,447	0/1:3,0:3:18.20:18,0,167	0/0:40,0:5:8.92:0,9,138	0/0:37,0:9:20.91:0,21,285	0/0:10,1:11:27.08:0,27,607	0/1:17,1:19:19.65:397,0,20	1/1:22,0:22:12.82:466,13,0	0/0:11,0:11:30.07:0,30,734	0/1:16,1:17:23.68:24,0,1094	0/0:16,0:16:18.31:0,18,1120	0/0:19,1:20:19.75:0,20,789	0/1:9,0:9:32.70:123,0,33	0/1:20,1:21:99:248,0,124	0/1:21,0:21:99:204,0,106	0/0:21,0:21:55.71:0,56,1555	0/1:14,1:15:39.61:40,0,892	0/0:7,0:7:7.88:0,8,200	0/1:14,0:14:0.89:1,0,928	0/1:10,0:9:31.10:31,0,469	0/0:11,0:11:30.09:0,30,778	0/0:15,0:15:10.88:0,11,785	1/1:14,2:15:34.36:397,34,0	1/1:15,0:15:15.69:179,16,0	0/1:9,1:10:29.69:162,0,30	0/1:27,1:28:99:155,0,1218	0/1:14,2:16:47.79:48,0,1042	0/0:10,0:10:30.10:0,30,940	0/1:5,0:5:68.57:69,0,259
chr10	94307560	.	AGGAGGAG	A	455.32	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=4.910;DP=475;FS=32.286;HRun=0;HaplotypeScore=179.7981;InbreedingCoeff=0.7474;MQ=45.40;MQ0=10;MQRankSum=-5.844;QD=16.26;ReadPosRankSum=0.304;VQSLOD=1.3943;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,2:14:15.98:285,16,0	0/0:4,0:4:11.02:0,11,252	0/0:35,0:5:12:0,12,237	0/0:42,0:11:22.17:0,22,508	0/0:11,0:11:24.08:0,24,874	0/0:23,0:23:20.87:0,21,1142	0/0:21,0:21:36.07:0,36,667	0/0:13,0:13:27.09:0,27,886	0/0:18,0:18:38.57:0,39,1179	0/0:15,0:15:30.06:0,30,1012	0/0:18,0:18:22.63:0,23,802	0/0:10,0:10:20.86:0,21,391	0/0:22,0:22:48.16:0,48,1359	0/0:21,0:21:43.51:0,44,1072	0/0:21,0:21:54.14:0,54,1905	0/0:16,0:16:26.95:0,27,825	1/1:4,3:8:15.25:283,15,0	0/0:14,0:14:36.12:0,36,1332	0/0:12,0:12:27.08:0,27,791	0/0:13,0:13:30.10:0,30,1027	0/0:16,0:16:36.12:0,36,1261	0/0:18,0:17:18.57:0,19,566	0/0:14,0:14:9.03:0,9,223	0/0:11,0:12:26.68:0,27,610	0/0:28,0:28:37.94:0,38,1332	0/0:18,0:18:40.75:0,41,1587	0/0:12,0:12:33.08:0,33,1004	0/1:6,0:6:6.23:6,0,219
chr10	94307904	.	T	TA	3157.03	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-8.275;DP=342;FS=8.390;HRun=9;HaplotypeScore=39.5470;InbreedingCoeff=0.9344;MQ=80.68;MQ0=0;MQRankSum=-2.082;QD=23.92;ReadPosRankSum=0.328;VQSLOD=3.9648;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:7:14.33:76,14,0	1/1:1,5:6:12.03:130,12,0	0/0:12,0:11:14.10:0,14,142	0/0:11,0:10:15.32:0,15,117	1/1:0,13:13:36.09:392,36,0	0/0:24,0:24:71.97:0,72,621	0/0:8,0:9:23.03:0,23,188	0/0:3,0:24:40.20:0,40,119	1/1:1,2:3:6.02:66,6,0	1/1:4,12:16:36.10:398,36,0	1/1:1,17:18:48.01:488,48,0	0/0:14,0:14:41.99:0,42,365	0/0:13,0:13:35.99:0,36,312	0/0:10,0:10:26.98:0,27,231	1/1:1,10:11:24.06:266,24,0	1/1:1,3:4:6.02:66,6,0	1/1:2,15:17:42.11:464,42,0	1/1:3,20:23:54.15:597,54,0	0/0:14,0:14:35.97:0,36,312	0/0:15,0:15:41.98:0,42,362	0/0:6,0:6:18:0,18,156	0/0:3,0:3:9:0,9,78	0/0:4,0:4:9:0,9,78	0/0:5,0:5:15:0,15,130	1/1:1,13:14:39.11:431,39,0	0/0:17,1:18:17.81:0,18,383	0/0:17,0:17:50.99:0,51,442	0/0:1,0:11:18.33:0,18,54
chr10	94308080	.	A	AC	703.80	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=0.498;DP=382;FS=3.769;HRun=1;HaplotypeScore=44.6337;InbreedingCoeff=0.4246;MQ=90.24;MQ0=1;MQRankSum=0.267;QD=14.08;ReadPosRankSum=-0.654;VQSLOD=2.5721;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:51.17:764,51,0	0/0:5,0:5:12.04:0,12,156	0/1:16,0:16:18.90:19,0,334	0/1:15,0:15:36.17:36,0,212	0/0:23,0:23:66.21:0,66,856	0/0:16,0:16:48.15:0,48,617	0/0:9,0:9:27.09:0,27,351	0/0:21,0:21:57.19:0,57,740	0/0:4,0:4:12.04:0,12,156	0/0:14,0:14:42.14:0,42,546	0/0:20,0:20:60.20:0,60,779	0/0:11,0:11:33.11:0,33,429	0/0:15,0:15:45.11:0,45,554	0/0:12,0:12:36.12:0,36,467	0/0:16,0:16:42.12:0,42,531	0/0:9,0:9:27.09:0,27,347	0/0:19,0:19:57.16:0,57,723	0/0:12,0:12:36.12:0,36,467	0/0:19,0:19:48.14:0,48,610	0/0:19,0:19:54.18:0,54,701	0/0:11,0:11:33.11:0,33,429	0/0:3,0:3:9.03:0,9,117	0/0:6,0:6:18.06:0,18,234	0/0:5,0:5:15.05:0,15,194	0/0:9,0:9:27.09:0,27,351	0/0:21,0:21:63.20:0,63,818	0/0:20,0:20:60.20:0,60,779	0/0:13,0:13:39.13:0,39,506
chr10	94308081	.	C	CT	449.54	PASS	AB=0.820;AC=4;AF=0.071;AN=56;BaseQRankSum=8.075;DP=382;FS=2.603;HRun=1;HaplotypeScore=45.5442;InbreedingCoeff=0.4266;MQ=90.21;MQ0=1;MQRankSum=0.666;QD=8.99;ReadPosRankSum=-1.035;VQSLOD=0.8005;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:50.58:370,51,0	0/0:5,0:5:15.04:0,15,181	0/1:14,3:16:89.36:89,0,320	0/1:11,4:15:99:105,0,212	0/0:23,0:23:66.20:0,66,842	0/0:16,0:16:48.15:0,48,617	0/0:9,0:9:27.09:0,27,351	0/0:21,0:21:60.17:0,60,743	0/0:4,0:4:12.04:0,12,156	0/0:14,0:14:42.14:0,42,545	0/0:21,0:21:60.19:0,60,779	0/0:11,0:11:33.11:0,33,428	0/0:15,0:15:39.12:0,39,499	0/0:13,0:13:36.12:0,36,467	0/0:16,0:16:48.12:0,48,593	0/0:9,0:9:27.03:0,27,331	0/0:19,0:19:54.18:0,54,701	0/0:12,0:12:36.12:0,36,467	0/0:16,0:16:45.15:0,45,584	0/0:19,0:19:57.17:0,57,715	0/0:11,0:11:33.11:0,33,428	0/0:3,0:3:9.03:0,9,117	0/0:6,0:6:18.06:0,18,234	0/0:6,0:6:15.05:0,15,195	0/0:9,0:9:27.09:0,27,351	0/0:21,0:21:63.20:0,63,818	0/0:20,0:20:60.18:0,60,764	0/0:13,0:13:39.13:0,39,506
chr10	94309768	.	CG	C	5408.07	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=16.466;DP=679;FS=1.322;HRun=1;HaplotypeScore=110.2833;InbreedingCoeff=0.9516;MQ=85.17;MQ0=0;MQRankSum=-5.461;QD=11.31;ReadPosRankSum=5.480;VQSLOD=3.2802;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:53.29:321,53,0	1/1:11,0:11:16.11:105,16,0	0/0:28,0:28:77.16:0,77,1098	0/0:21,0:21:43.18:0,43,768	1/1:26,0:26:38.50:248,38,0	1/1:26,0:26:43.38:301,43,0	1/1:13,0:13:8.66:98,9,0	1/1:38,0:38:12.65:251,13,0	1/1:18,0:18:43.76:198,44,0	1/1:32,0:32:58.90:295,59,0	1/1:17,0:17:24.28:187,24,0	1/1:17,0:17:28.02:213,28,0	1/1:36,0:36:57.30:436,57,0	1/1:23,0:23:55.21:238,55,0	1/1:28,0:28:32.59:269,33,0	1/1:21,0:21:33.06:211,33,0	1/1:2,22:24:41.14:617,41,0	1/1:19,0:19:49.06:218,49,0	0/0:28,0:28:81.26:0,81,1265	0/0:29,0:29:84.29:0,84,1330	0/0:20,0:20:57.19:0,57,908	1/1:19,0:19:50.92:276,51,0	1/1:24,0:24:3.31:224,3,0	1/1:14,0:13:36.10:185,36,0	1/1:22,1:23:61:306,61,0	0/0:36,0:36:99:0,108,1704	0/0:39,0:38:99:0,114,1781	1/1:17,0:17:46.68:212,47,0
chr10	94309769	.	GT	G	14699.74	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=11.208;DP=679;FS=0.000;HRun=5;HaplotypeScore=78.8066;InbreedingCoeff=0.9998;MQ=85.69;MQ0=0;MQRankSum=-4.346;QD=30.88;ReadPosRankSum=3.382;VQSLOD=5.3719;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:81.23:918,81,0	1/1:0,11:11:30.08:340,30,0	0/0:28,0:28:69.01:0,69,876	0/0:22,0:22:40.61:0,41,656	1/1:0,26:26:69.19:782,69,0	1/1:2,24:26:69.20:782,69,0	1/1:1,11:12:30.08:340,30,0	1/1:4,34:38:99:1115,102,0	1/1:0,18:18:48.14:544,48,0	1/1:1,30:31:90.26:1020,90,0	1/1:1,16:17:48.14:544,48,0	1/1:1,16:17:48.14:544,48,0	1/1:3,33:36:99:1153,102,0	1/1:1,22:23:69.17:762,69,0	1/1:3,26:29:78.22:884,78,0	1/1:1,20:21:60.17:680,60,0	1/1:24,0:24:40.69:616,41,0	1/1:0,19:19:54.15:612,54,0	0/0:27,0:27:78.26:0,78,1067	0/0:29,0:29:84.28:0,84,1149	0/0:22,0:22:63.19:0,63,831	1/1:1,18:19:54.15:611,54,0	1/1:3,21:24:60.17:680,60,0	1/1:2,13:14:42.08:462,42,0	1/1:1,22:23:66.08:730,66,0	0/0:36,0:36:99:0,108,1478	0/0:39,0:38:99:0,114,1556	1/1:0,17:17:51.15:578,51,0
chr10	94309834	.	C	CT	6480.41	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=4.292;DP=628;FS=3.529;HRun=1;HaplotypeScore=85.5752;InbreedingCoeff=0.9986;MQ=88.89;MQ0=0;MQRankSum=-5.587;QD=39.04;ReadPosRankSum=2.114;VQSLOD=5.5573;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,1283	0/0:13,0:13:39.13:0,39,504	0/0:28,0:28:75.22:0,75,946	0/0:22,0:22:59.22:0,59,745	0/0:21,0:21:54.16:0,54,686	1/1:2,23:25:69.22:1001,69,0	1/1:2,12:14:33.07:470,33,0	0/0:24,0:24:69.17:0,69,854	0/0:18,0:18:42.14:0,42,545	0/0:26,0:26:69.22:0,69,896	0/0:22,0:22:66.18:0,66,828	1/1:3,21:24:60.19:881,60,0	1/1:1,24:25:69.23:1032,69,0	1/1:0,18:18:51.17:764,51,0	0/0:17,0:17:51.15:0,51,648	0/0:19,0:19:57.19:0,57,740	0/0:25,0:25:63.20:0,63,818	0/0:18,0:18:51.17:0,51,662	0/0:22,0:22:66.20:0,66,839	0/0:22,0:22:63.20:0,63,818	0/0:21,0:21:54.17:0,54,701	1/1:1,23:24:66.18:964,66,0	1/1:2,17:19:48.13:695,48,0	1/1:0,17:16:45.15:674,45,0	0/0:25,0:25:72.23:0,72,934	0/0:35,0:35:99:0,102,1287	0/0:41,0:41:99:0,111,1440	0/0:7,0:7:18.06:0,18,234
chr10	94309977	.	GGT	G	480.22	PASS	AB=0.924;AC=28;AF=0.700;AN=40;BaseQRankSum=2.418;DP=565;FS=0.000;HRun=0;HaplotypeScore=105.7651;InbreedingCoeff=0.2042;MQ=65.28;MQ0=19;MQRankSum=-1.336;QD=1.53;ReadPosRankSum=0.423;VQSLOD=1.7399;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/1:20,0:19:25.25:25,0,32	0/0:21,0:21:9.01:0,9,90	0/0:20,0:18:3.01:0,3,38	./.	1/1:11,5:15:3.01:31,3,0	1/1:12,0:12:2.97:20,3,0	0/1:14,0:12:12.91:81,0,13	1/1:14,0:17:11.36:56,11,0	1/1:15,0:19:8.52:42,9,0	1/1:21,0:21:2.84:14,3,0	1/1:18,0:17:3.01:31,3,0	1/1:13,4:18:11.86:108,12,0	1/1:27,0:28:8.26:42,8,0	0/0:16,0:16:2.97:0,3,20	./.	1/1:20,0:23:8.52:42,9,0	0/0:37,0:36:0:0,0,1	1/1:19,0:20:2.84:14,3,0	1/1:16,0:16:2.84:14,3,0	0/1:25,0:25:0:0,0,0	0/1:9,7:16:18.92:25,0,19	./.	1/1:18,0:23:11.36:56,11,0	./.
chr10	94310369	.	T	TC	11477.69	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-9.600;DP=688;FS=10.578;HRun=1;HaplotypeScore=77.2542;InbreedingCoeff=1.0000;MQ=85.08;MQ0=0;MQRankSum=-2.035;QD=42.51;ReadPosRankSum=3.276;VQSLOD=4.5391;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.27:0,90,1222	0/0:11,0:11:33.11:0,33,459	0/0:22,0:22:63.12:0,63,790	0/0:22,0:22:60.09:0,60,778	0/0:22,0:22:66.16:0,66,867	1/1:0,27:27:69.24:1103,69,0	1/1:0,23:23:63.21:1007,63,0	1/1:2,29:31:87.26:1299,87,0	0/0:23,0:23:69.22:0,69,945	0/0:25,0:25:72.10:0,72,967	0/0:27,0:27:75.23:0,75,1031	1/1:1,32:33:87.30:1390,87,0	1/1:0,28:28:78.27:1247,78,0	1/1:1,26:27:72.25:1151,72,0	0/0:27,0:27:75.24:0,75,1032	0/0:28,0:28:84.27:0,84,1161	1/1:0,18:18:45.15:719,45,0	0/0:24,0:24:66.22:0,66,923	0/0:21,0:21:63.10:0,63,785	0/0:26,0:26:75.24:0,75,1030	0/0:22,0:22:63.21:0,63,876	1/1:0,26:26:72.18:1119,72,0	1/1:1,21:22:57.19:910,57,0	1/1:0,18:18:48.16:767,48,0	0/0:20,0:20:60.19:0,60,822	0/0:27,0:27:81.27:0,81,1133	0/0:40,0:39:99:0,117,1635	1/1:0,17:17:48.16:767,48,0
chr10	94311092	.	GT	G	1321.42	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.014;DP=533;FS=8.007;HRun=6;HaplotypeScore=51.2769;InbreedingCoeff=0.8565;MQ=66.77;MQ0=0;MQRankSum=0.329;QD=25.91;ReadPosRankSum=-4.574;VQSLOD=1.4532;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.15:0,51,653	0/0:11,0:11:33.11:0,33,434	0/0:5,0:4:2.54:0,3,24	0/0:8,0:7:14.99:0,15,166	0/0:33,0:33:87.28:0,87,1137	0/0:18,0:17:48.16:0,48,632	0/0:13,0:13:33.11:0,33,434	1/1:2,34:36:99:1088,102,0	0/0:16,0:16:48.16:0,48,631	0/0:25,0:25:72.21:0,72,910	0/0:21,0:21:60.20:0,60,789	0/0:16,0:16:48.15:0,48,619	0/0:19,0:19:57.19:0,57,750	0/0:24,0:24:69.21:0,69,893	0/0:23,0:23:66.21:0,66,868	0/0:13,0:13:33.11:0,33,434	0/0:27,0:27:72.22:0,72,931	0/0:13,0:13:36.07:0,36,454	0/0:19,0:19:54.15:0,54,671	0/0:28,0:28:84.27:0,84,1096	0/0:6,0:6:18.06:0,18,237	0/0:9,0:9:27.09:0,27,355	0/0:22,0:22:66.21:0,66,868	0/0:3,0:3:6.02:0,6,79	0/0:35,0:35:96.27:0,96,1209	0/0:25,0:25:66.21:0,66,854	0/0:33,0:33:84.27:0,84,1105	1/1:0,15:15:33.08:355,33,0
chr10	94312863	.	T	TTCAC	11682.15	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=17.722;DP=628;FS=20.114;HRun=0;HaplotypeScore=130.9680;InbreedingCoeff=0.9987;MQ=83.97;MQ0=0;MQRankSum=-18.065;QD=65.63;ReadPosRankSum=0.566;VQSLOD=5.2786;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,150,2944	0/0:7,0:7:21.07:0,21,419	0/0:28,0:28:84.27:0,84,1603	0/0:20,0:20:54.18:0,54,1007	0/0:16,0:16:42.14:0,42,838	1/1:6,16:22:57.20:1586,57,0	1/1:7,11:18:39.13:1074,39,0	0/0:27,0:27:81.28:0,81,1611	0/0:19,0:19:54.19:0,54,1071	0/0:30,0:30:87.29:0,87,1675	0/0:17,0:17:51.17:0,51,967	1/1:8,24:33:87.29:2338,87,0	1/1:10,13:23:51.09:1297,51,0	1/1:8,14:23:51.17:1362,51,0	0/0:33,0:33:96.31:0,96,1848	0/0:32,0:32:96.33:0,96,1904	1/1:4,7:11:27.05:687,27,0	0/0:15,0:15:42.14:0,42,838	0/0:19,0:19:54.18:0,54,1031	0/0:21,0:21:63.20:0,63,1191	0/0:31,0:31:93.30:0,93,1776	1/1:1,16:17:51.17:1369,51,0	1/1:5,13:19:51.18:1414,51,0	1/1:6,6:12:24.08:555,24,0	0/0:18,0:18:54.19:0,54,1077	0/0:32,0:32:93.32:0,93,1844	0/0:25,0:25:75.26:0,75,1471	0/0:10,0:10:27.09:0,27,539
chr10	94313183	.	AGAGGGGAGGGGGTAGGGG	A	302.96	PASS	AB=1.000;AC=5;AF=0.096;AN=52;BaseQRankSum=-0.740;DP=300;FS=0.000;HRun=0;HaplotypeScore=161.9554;InbreedingCoeff=0.1310;MQ=70.10;MQ0=0;MQRankSum=-2.289;QD=4.04;ReadPosRankSum=-3.980;VQSLOD=0.9859;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:30.81:0,31,963	0/0:2,0:2:3.01:0,3,259	0/0:18,0:10:15.72:0,16,420	0/0:24,0:16:12.87:0,13,450	0/0:3,0:3:6.02:0,6,331	0/1:18,0:18:18.42:18,0,26	0/0:21,0:21:3.94:0,4,25	0/0:8,0:7:20.99:0,21,670	./.	0/0:7,0:7:12.04:0,12,727	0/0:5,0:5:9.01:0,9,342	0/0:28,0:28:32.10:0,32,101	0/0:20,0:20:22:0,22,66	0/0:23,0:23:23.20:0,23,70	./.	0/0:8,0:8:15.05:0,15,716	1/1:6,16:22:9.03:373,9,0	0/0:3,0:3:8.99:0,9,347	0/0:1,0:1:2.98:0,3,21	0/0:5,0:5:6.49:0,6,368	0/0:5,0:5:12.04:0,12,812	0/1:20,0:20:12.48:12,0,23	0/1:15,0:15:5.02:5,0,15	0/0:14,0:14:9.38:0,9,27	0/0:5,0:5:12.04:0,12,849	0/0:2,0:2:2.98:0,3,22	0/0:4,0:4:6.02:0,6,203	0/0:3,0:3:6.02:0,6,491
chr10	94313190	.	AGGGGGTAGGGG	A	8774.20	PASS	AC=18;AF=0.346;AN=52;BaseQRankSum=8.587;DP=276;FS=2.803;HRun=0;HaplotypeScore=86.3929;InbreedingCoeff=0.7849;MQ=68.80;MQ0=0;MQRankSum=-8.169;QD=51.61;ReadPosRankSum=6.723;VQSLOD=4.1350;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:33.41:0,33,805	0/0:1,0:1:3.01:0,3,175	0/0:16,0:8:7.27:0,7,332	0/0:23,0:16:5.39:0,5,211	0/0:2,0:2:6.02:0,6,226	1/1:0,20:20:30.10:1036,30,0	1/1:0,20:20:18.06:639,18,0	0/0:8,0:7:23.99:0,24,628	./.	0/0:6,0:6:12.04:0,12,474	0/0:3,0:3:9.01:0,9,247	1/1:0,25:25:60.21:2127,60,0	1/1:0,22:22:42.14:1451,42,0	1/1:1,19:20:33.11:1176,33,0	./.	0/0:5,0:5:15.05:0,15,478	1/1:18,0:18:7.58:163,8,0	0/0:3,0:3:8.99:0,9,245	0/0:1,0:1:2.98:0,3,21	0/0:4,0:5:5.93:0,6,212	0/0:5,0:5:12.04:0,12,562	1/1:0,17:17:33.06:1089,33,0	1/1:0,10:10:17.73:555,18,0	1/1:0,18:18:15.52:539,16,0	0/0:6,0:6:15.05:0,15,675	0/0:2,0:2:2.98:0,3,22	0/0:4,0:4:12.04:0,12,296	0/0:2,0:2:6.02:0,6,350
chr10	94313874	.	G	GATATCT	5158.17	PASS	AC=30;AF=0.577;AN=52;BaseQRankSum=-4.813;DP=552;FS=1.237;HRun=0;HaplotypeScore=162.8993;InbreedingCoeff=0.7712;MQ=69.76;MQ0=3;MQRankSum=-8.712;QD=17.43;ReadPosRankSum=-2.208;VQSLOD=3.8187;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:24.06:0,24,457	1/1:5,11:16:24.08:783,24,0	0/0:12,0:11:2.49:0,2,40	0/0:26,0:19:3.89:0,4,65	1/1:21,23:44:18.06:585,18,0	1/1:28,0:27:15.04:267,15,0	1/1:6,0:6:6.02:108,6,0	0/0:35,0:35:42.12:0,42,789	1/1:10,7:19:6.02:196,6,0	1/1:20,7:28:27.09:775,27,0	1/1:16,8:25:12.04:391,12,0	1/1:20,0:20:9.03:195,9,0	1/1:19,0:18:3.01:30,3,0	./.	1/1:8,13:22:15.05:489,15,0	1/1:9,11:21:18.06:576,18,0	1/1:8,0:5:3.01:34,3,0	1/1:5,5:10:6.02:196,6,0	0/0:16,0:16:18.06:0,18,372	0/0:33,0:33:78.27:0,78,1601	0/0:13,0:13:27.09:0,27,545	./.	1/1:11,0:11:3.01:45,3,0	0/0:3,0:3:0:0,0,0	1/1:9,8:17:15.05:489,15,0	0/0:30,0:30:63.21:0,63,1268	0/0:38,0:38:69.22:0,69,1387	0/0:8,0:8:21.07:0,21,435
chr10	94313913	.	T	TATAG	1622.12	PASS	AB=0.903;AC=15;AF=0.288;AN=52;BaseQRankSum=4.007;DP=539;FS=0.000;HRun=0;HaplotypeScore=151.2242;InbreedingCoeff=0.7695;MQ=73.75;MQ0=1;MQRankSum=0.860;QD=11.59;ReadPosRankSum=1.389;VQSLOD=3.2381;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:48.14:0,48,854	0/0:14,0:14:36.12:0,36,663	0/0:13,0:11:17.79:0,18,224	0/1:24,0:20:22.78:23,0,49	0/0:37,0:37:60.19:0,60,1055	1/1:9,17:27:12.04:324,12,0	./.	0/0:42,0:42:99:0,120,2142	0/0:14,0:14:24.08:0,24,445	0/0:18,0:18:54.17:0,54,983	0/0:27,0:27:51.17:0,51,949	1/1:1,20:22:14.81:404,15,0	1/1:8,13:22:17:558,17,0	1/1:4,9:14:3.01:81,3,0	0/0:25,0:25:51.17:0,51,934	0/0:18,0:18:33.11:0,33,578	1/1:4,2:6:1.81:79,2,0	0/0:7,0:7:15.02:0,15,241	0/0:13,0:13:39.11:0,39,694	0/0:45,0:45:99:0,126,2240	0/0:13,0:13:36.10:0,36,649	1/1:0,8:8:9.03:243,9,0	1/1:2,9:11:3.01:81,3,0	./.	0/0:17,0:17:36.10:0,36,639	0/0:27,0:27:81.26:0,81,1461	0/0:31,0:30:93.28:0,93,1645	0/0:11,0:11:33.11:0,33,621
chr10	94314348	.	GT	G	3044.21	PASS	AB=0.938;AC=20;AF=0.357;AN=56;BaseQRankSum=7.040;DP=537;FS=7.174;HRun=10;HaplotypeScore=69.6865;InbreedingCoeff=0.8483;MQ=68.65;MQ0=0;MQRankSum=-2.325;QD=18.56;ReadPosRankSum=0.749;VQSLOD=4.3261;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:78.15:0,78,831	0/1:8,0:8:8.62:9,0,100	0/1:6,1:7:16.56:17,0,58	0/0:13,0:12:14.17:0,14,155	0/0:26,0:26:60.15:0,60,751	1/1:6,14:20:53.95:460,54,0	1/1:1,13:14:38.99:338,39,0	0/0:23,1:24:31.06:0,31,551	0/0:16,0:16:39.11:0,39,431	0/0:28,1:29:43.13:0,43,704	0/0:26,0:26:60.16:0,60,664	1/1:2,12:14:41.98:360,42,0	1/1:1,14:15:38.99:338,39,0	1/1:1,13:14:41.98:362,42,0	0/0:15,0:15:36.10:0,36,398	0/0:20,0:20:60.15:0,60,657	1/1:4,13:17:19.39:316,19,0	0/0:14,1:15:19.13:0,19,439	0/0:21,0:21:63.12:0,63,674	0/0:35,0:35:99:0,99,1079	0/0:22,0:22:45.11:0,45,489	1/1:3,14:17:38.97:337,39,0	1/1:5,19:24:56.93:489,57,0	1/1:6,8:14:26.97:234,27,0	0/0:19,0:20:47.96:0,48,512	0/0:19,1:20:16.04:0,16,390	0/0:27,0:27:75.17:0,75,804	0/0:12,0:12:33.06:0,33,347
chr10	94314386	.	CA	C	7592.88	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=7.807;DP=490;FS=4.880;HRun=9;HaplotypeScore=63.6300;InbreedingCoeff=0.8920;MQ=77.83;MQ0=2;MQRankSum=-3.428;QD=21.09;ReadPosRankSum=1.259;VQSLOD=5.8118;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:31:78.04:714,78,0	1/1:2,4:6:12.01:110,12,0	0/0:24,0:21:19.32:0,19,279	0/1:13,0:10:16.76:17,0,73	1/1:4,23:27:66.03:604,66,0	1/1:3,13:16:39.02:357,39,0	1/1:3,10:13:32.97:294,33,0	1/1:6,14:20:38.98:347,39,0	1/1:2,10:12:27.01:247,27,0	1/1:5,27:32:78.04:713,78,0	1/1:3,16:19:48.02:437,48,0	1/1:5,11:16:42.02:384,42,0	1/1:6,5:11:20.99:187,21,0	1/1:3,12:15:39.02:357,39,0	1/1:1,12:13:30.02:275,30,0	1/1:2,15:17:38.99:357,39,0	1/1:1,13:14:35.76:329,36,0	1/1:3,12:15:36.02:329,36,0	0/0:26,1:27:32.70:0,33,616	0/0:31,0:31:84.25:0,84,969	0/0:9,0:9:21.06:0,21,242	1/1:1,11:12:36.01:325,36,0	1/1:8,7:15:30.01:273,30,0	1/1:1,8:9:21.01:192,21,0	1/1:3,18:21:45.01:412,45,0	0/0:19,0:19:45.13:0,45,518	0/0:19,1:20:26.67:0,27,543	1/1:1,12:13:37.57:334,38,0
chr10	94314468	.	TTTTG	T	1065.03	PASS	AB=0.955;AC=6;AF=0.107;AN=56;BaseQRankSum=2.714;DP=523;FS=1.583;HRun=0;HaplotypeScore=106.8915;InbreedingCoeff=0.6620;MQ=63.60;MQ0=0;MQRankSum=-5.318;QD=16.91;ReadPosRankSum=-3.103;VQSLOD=2.8911;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,111,2641	0/0:11,0:11:27.09:0,27,667	0/1:21,0:16:1.24:1,0,263	0/1:9,1:9:29.53:30,0,302	0/0:29,0:29:69.13:0,69,1576	0/0:22,0:22:48.16:0,48,1043	0/0:17,0:17:42.14:0,42,993	1/1:13,15:28:56.96:958,57,0	0/0:14,0:14:33.11:0,33,761	0/0:16,0:16:33.11:0,33,804	0/0:15,0:15:33.11:0,33,812	0/0:6,0:6:12.04:0,12,272	0/0:15,0:15:45.15:0,45,1016	0/0:21,0:21:51.17:0,51,1190	0/0:17,0:17:45.15:0,45,1110	0/0:15,0:15:33.11:0,33,786	0/0:21,0:20:48.16:0,48,1107	0/0:22,0:22:54.18:0,54,1262	0/0:31,0:30:63.19:0,63,1372	0/0:24,0:24:60.21:0,60,1411	0/0:11,0:11:27.09:0,27,579	0/0:8,0:8:24.07:0,24,542	0/0:13,0:13:29.13:0,29,588	0/0:17,0:17:36.74:0,37,834	0/0:24,0:24:63.22:0,63,1551	0/0:22,0:22:60.21:0,60,1471	0/0:26,0:25:75.23:0,75,1595	1/1:0,4:4:12.04:203,12,0
chr10	94314497	.	GT	G	2612.36	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.054;DP=495;FS=1.428;HRun=8;HaplotypeScore=60.2226;InbreedingCoeff=0.9861;MQ=57.53;MQ0=4;MQRankSum=-0.384;QD=16.96;ReadPosRankSum=2.108;VQSLOD=3.6902;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:51:99:0,141,1681	0/0:12,0:12:30.09:0,30,362	0/0:24,0:11:21.06:0,21,247	0/0:19,0:10:17.94:0,18,200	0/0:17,0:17:48.15:0,48,580	1/1:1,15:15:36.06:347,36,0	1/1:3,12:15:36.06:347,36,0	1/1:12,12:22:15:141,15,0	0/0:14,0:14:42.13:0,42,507	0/0:15,0:15:42.12:0,42,499	0/0:14,0:14:42.13:0,42,500	1/1:2,5:5:15.02:145,15,0	1/1:2,11:13:24.03:232,24,0	1/1:3,13:16:36.06:348,36,0	0/0:15,0:15:45.12:0,45,529	0/0:13,0:13:36.10:0,36,423	1/1:2,18:20:44.88:433,45,0	0/0:25,0:25:66.14:0,66,766	0/0:17,0:16:42.10:0,42,492	0/0:24,0:24:72.20:0,72,844	0/0:11,0:11:30.05:0,30,346	1/1:1,8:9:18.03:174,18,0	1/1:1,14:15:30.05:289,30,0	1/1:2,12:14:30.05:290,30,0	0/0:22,0:22:63.18:0,63,751	0/0:19,0:19:48.15:0,48,580	0/0:29,0:28:84.24:0,84,1001	1/1:1,4:5:10.83:92,11,0
chr10	94315159	.	GA	G	9852.29	PASS	AB=0.900;AC=43;AF=0.768;AN=56;BaseQRankSum=8.591;DP=671;FS=6.659;HRun=10;HaplotypeScore=69.1861;InbreedingCoeff=0.8957;MQ=71.08;MQ0=0;MQRankSum=-2.612;QD=18.80;ReadPosRankSum=3.460;VQSLOD=5.7490;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,46:48:99:912,105,0	1/1:2,11:13:23.99:208,24,0	0/1:16,2:17:10.63:11,0,273	0/0:14,0:15:22.26:0,22,241	1/1:6,22:28:56.95:493,57,0	1/1:1,23:24:62.99:547,63,0	1/1:4,14:18:18.54:315,19,0	1/1:1,24:25:65.94:564,66,0	1/1:4,21:25:56.98:495,57,0	1/1:2,21:24:62.02:527,62,0	1/1:4,23:26:62.98:547,63,0	1/1:3,13:16:35.99:313,36,0	1/1:2,20:22:50.91:443,51,0	1/1:7,18:25:44.98:391,45,0	1/1:4,25:29:29.80:488,30,0	1/1:5,21:26:9.62:372,10,0	1/1:2,20:22:53.99:469,54,0	1/1:2,16:18:41.99:364,42,0	0/0:15,0:15:42.11:0,42,464	0/0:31,0:31:43.85:0,44,705	0/0:26,0:27:63.33:0,63,654	1/1:4,22:26:62.97:546,63,0	1/1:3,26:29:74.98:651,75,0	1/1:2,22:24:56.99:495,57,0	1/1:3,26:29:59.98:521,60,0	0/0:25,0:25:60.16:0,60,664	0/0:34,0:34:80.68:0,81,859	1/1:0,8:8:21:182,21,0
chr10	94316802	.	TAGG	T	11086.19	PASS	AB=0.906;AC=21;AF=0.375;AN=56;BaseQRankSum=20.264;DP=744;FS=7.121;HRun=0;HaplotypeScore=160.3141;InbreedingCoeff=0.9234;MQ=88.58;MQ0=0;MQRankSum=-7.480;QD=38.90;ReadPosRankSum=4.937;VQSLOD=5.4461;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,35:37:93.32:1533,93,0	1/1:1,8:9:24.08:396,24,0	0/0:33,0:33:93.24:0,93,1925	0/0:23,0:24:53.40:0,53,1265	1/1:2,36:38:87.19:1381,87,0	0/0:24,0:24:66.23:0,66,1490	0/0:28,0:28:81.26:0,81,1720	0/0:49,0:49:99:0,138,3105	1/1:2,16:18:48.16:798,48,0	1/1:0,34:34:99:1661,102,0	1/1:0,24:24:63.22:1046,63,0	0/0:24,0:24:69.24:0,69,1526	0/0:25,0:25:69.24:0,69,1522	0/0:31,0:31:90.31:0,90,2003	1/1:3,25:28:69.24:1145,69,0	1/1:1,19:20:54.18:899,54,0	0/0:26,0:26:72.25:0,72,1529	1/1:0,20:20:54.18:867,54,0	0/0:28,0:28:72.22:0,72,1496	0/0:26,0:26:78.27:0,78,1748	0/0:30,0:30:87.24:0,87,1859	0/0:27,0:27:78.24:0,78,1682	0/0:19,0:19:57.20:0,57,1292	0/0:25,0:25:72.25:0,72,1609	1/1:1,27:28:78.27:1292,78,0	0/1:26,3:29:68.38:68,0,1516	0/0:29,0:27:84.24:0,84,1813	0/0:11,0:11:30.10:0,30,680
chr10	94317265	.	G	GGCCTCCAAGAACC	76738.79	PASS	AB=0.970;AC=43;AF=0.768;AN=56;BaseQRankSum=-5.454;DP=718;FS=24.169;HRun=0;HaplotypeScore=240.5834;InbreedingCoeff=0.8887;MQ=83.55;MQ0=0;MQRankSum=-20.293;QD=148.72;ReadPosRankSum=2.843;VQSLOD=3.6181;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,24:38:99:6042,102,0	1/1:5,8:13:36.12:2146,36,0	0/0:26,0:26:78.25:0,78,2822	0/0:36,0:36:99:0,99,2801	1/1:6,8:16:36.59:1565,37,0	1/1:3,12:18:45.15:2998,45,0	1/1:14,14:32:90.31:5423,90,0	1/1:15,10:29:87.24:4765,87,0	1/1:7,17:25:69.24:4589,69,0	1/1:7,14:27:78.18:4372,78,0	1/1:7,4:14:30.10:1545,30,0	1/1:9,17:29:81.28:5085,81,0	1/1:10,20:34:93.28:5694,93,0	1/1:6,27:36:99:6476,102,0	1/1:12,15:32:78.27:4823,78,0	1/1:12,23:39:99:6690,105,0	1/1:3,8:16:33.11:1884,33,0	1/1:5,4:9:24.08:1260,24,0	0/0:28,0:28:84.27:0,84,3095	0/0:21,0:20:60.21:0,60,2379	0/0:66,0:66:99:0,187,6931	1/1:4,18:24:69.24:4354,69,0	1/1:8,4:16:41.66:2137,42,0	1/1:7,10:19:33.07:1808,33,0	1/1:6,8:14:39.13:2183,39,0	0/1:31,1:32:99:290,0,3218	0/0:25,0:25:75.24:0,75,2979	1/1:1,2:4:9.03:610,9,0
chr10	94317644	.	AG	A	1351.68	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.392;DP=816;FS=7.124;HRun=3;HaplotypeScore=82.2842;InbreedingCoeff=1.0000;MQ=84.98;MQ0=0;MQRankSum=-0.460;QD=32.97;ReadPosRankSum=-1.361;VQSLOD=3.3023;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1446	0/0:18,0:18:51.17:0,51,728	0/0:33,0:33:89.64:0,90,1164	0/0:30,0:29:80.66:0,81,1023	0/0:26,0:26:66.13:0,66,906	0/0:20,0:20:60.20:0,60,864	0/0:25,0:25:75.24:0,75,1060	1/1:1,25:26:75.22:916,75,0	0/0:36,0:36:99:0,99,1418	0/0:25,0:25:72.24:0,72,1037	0/0:21,0:21:60.19:0,60,846	0/0:46,0:46:99:0,138,1948	0/0:36,0:36:99:0,105,1488	0/0:41,0:41:99:0,111,1581	0/0:36,0:36:99:0,108,1536	0/0:23,0:23:66.20:0,66,917	0/0:23,0:23:66.22:0,66,950	0/0:31,0:31:90.30:0,90,1292	0/0:26,0:26:72.21:0,72,1010	0/0:22,0:22:66.22:0,66,948	0/0:38,0:38:99:0,105,1492	0/0:26,0:26:75.25:0,75,1073	0/0:20,0:20:54.18:0,54,776	0/0:43,0:43:99:0,123,1752	0/0:31,0:31:90.29:0,90,1275	0/0:37,0:37:99:0,105,1495	0/0:25,0:25:72.24:0,72,1034	1/1:0,15:15:45.14:557,45,0
chr10	94319274	.	A	AT	8087.01	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-12.260;DP=497;FS=3.849;HRun=7;HaplotypeScore=46.2943;InbreedingCoeff=0.9837;MQ=84.76;MQ0=1;MQRankSum=-2.213;QD=28.88;ReadPosRankSum=5.778;VQSLOD=4.8170;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,114,1100	1/1:1,4:5:12.04:145,12,0	0/0:31,1:28:27.08:0,27,369	0/0:21,1:15:21.03:0,21,203	1/1:3,11:14:18.05:214,18,0	1/1:3,19:22:45.14:544,45,0	1/1:1,12:13:33.10:398,33,0	0/0:39,0:39:99:0,102,985	1/1:3,16:19:48.15:580,48,0	1/1:2,10:12:30.07:349,30,0	1/1:0,13:13:33.10:399,33,0	1/1:1,22:23:60.18:725,60,0	1/1:2,14:16:42.13:507,42,0	1/1:0,13:13:36.11:435,36,0	1/1:2,23:25:63.19:761,63,0	1/1:1,21:22:57.17:688,57,0	1/1:2,14:16:33.10:399,33,0	1/1:0,27:27:66.20:797,66,0	0/0:16,0:16:45.05:0,45,423	0/0:9,0:9:21.03:0,21,203	0/0:13,0:13:36.06:0,36,347	1/1:2,5:7:15.04:168,15,0	1/1:0,7:7:15.05:181,15,0	1/1:1,16:17:45.14:544,45,0	1/1:0,9:9:21.06:254,21,0	0/0:18,1:19:17.84:0,18,456	0/0:19,0:19:54.08:0,54,521	0/0:6,0:6:15.02:0,15,145
chr10	94320258	.	C	CTT	1133.27	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.875;DP=601;FS=2.552;HRun=5;HaplotypeScore=74.9468;InbreedingCoeff=0.7944;MQ=75.04;MQ0=1;MQRankSum=-1.030;QD=40.47;ReadPosRankSum=1.316;VQSLOD=3.1229;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:75.21:1228,75,0	0/0:8,0:8:24.08:0,24,367	0/0:16,0:15:0.67:0,1,297	0/0:16,0:13:18.17:0,18,214	0/0:27,0:27:72.24:0,72,1094	0/0:20,0:20:57.18:0,57,850	0/0:21,0:21:63.15:0,63,876	0/0:34,0:34:99:0,102,1497	0/0:24,0:24:66.21:0,66,968	0/0:22,0:22:60.20:0,60,899	0/0:29,0:29:84.23:0,84,1192	0/0:17,0:17:48.14:0,48,691	0/0:21,0:21:60.20:0,60,914	0/0:18,0:18:51.17:0,51,777	0/0:30,0:30:87.28:0,87,1309	0/0:28,0:28:84.27:0,84,1247	0/0:26,0:26:75.22:0,75,1098	0/0:12,0:12:33.11:0,33,492	0/0:16,0:16:45.14:0,45,650	0/0:22,0:22:63.19:0,63,922	0/0:17,0:17:51.17:0,51,768	0/0:18,0:18:51.17:0,51,780	0/0:26,0:26:78.26:0,78,1190	0/0:13,0:13:36.09:0,36,507	0/0:21,0:21:60.20:0,60,912	0/0:28,0:28:81.26:0,81,1208	0/0:36,0:36:99:0,102,1511	0/0:7,0:7:21.07:0,21,318
chr10	94321837	.	GTAA	G	21745.44	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=15.172;DP=725;FS=0.602;HRun=0;HaplotypeScore=117.2924;InbreedingCoeff=0.9984;MQ=85.26;MQ0=0;MQRankSum=-4.784;QD=46.27;ReadPosRankSum=6.600;VQSLOD=6.5600;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:81.23:1474,81,0	1/1:0,8:8:24.08:447,24,0	0/0:27,0:26:78.27:0,78,1854	0/0:23,0:23:66.23:0,66,1593	1/1:0,30:30:78.27:1454,78,0	1/1:0,21:21:60.21:1118,60,0	1/1:0,13:13:36.12:671,36,0	0/0:29,0:29:81.27:0,81,1959	1/1:0,26:26:63.22:1173,63,0	1/1:0,41:41:99:2196,123,0	1/1:0,23:23:45.11:803,45,0	1/1:0,18:18:39.13:727,39,0	1/1:0,22:22:56.99:1061,57,0	1/1:0,28:28:75.26:1398,75,0	1/1:0,30:30:75.26:1398,75,0	1/1:0,20:20:48.16:894,48,0	1/1:0,20:20:48.16:895,48,0	1/1:0,28:28:66.23:1230,66,0	0/0:20,0:20:50.75:0,51,1274	0/0:41,0:41:99:0,123,2947	0/0:50,0:50:99:0,144,3452	1/1:0,25:25:69.24:1286,69,0	1/1:0,23:23:60.07:1118,60,0	1/1:0,30:30:62.63:1172,63,0	1/1:0,26:26:66.23:1230,66,0	0/0:34,0:34:99:0,99,2428	0/0:25,0:24:75.26:0,75,1817	0/0:6,0:6:18.06:0,18,442
chr10	94323563	.	AGT	A	590.66	PASS	AB=0.976;AC=4;AF=0.071;AN=56;BaseQRankSum=2.982;DP=772;FS=6.047;HRun=0;HaplotypeScore=150.7586;InbreedingCoeff=0.5167;MQ=52.26;MQ0=25;MQRankSum=1.358;QD=5.32;ReadPosRankSum=0.844;VQSLOD=2.7243;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,19:30:54.07:684,54,0	0/0:7,0:7:18.06:0,18,290	0/1:61,0:8:3.33:3,0,181	0/0:53,0:16:22.45:0,22,386	0/0:10,0:10:24.08:0,24,401	0/0:20,0:20:30.10:0,30,502	0/0:29,0:29:48.14:0,48,776	0/0:37,1:37:55.11:0,55,1439	0/0:16,0:16:33.11:0,33,552	0/0:16,0:16:39.08:0,39,584	0/0:12,0:12:30.10:0,30,489	0/0:27,0:27:42.13:0,42,671	0/1:19,1:20:5.07:5,0,445	0/0:30,1:31:31.02:0,31,1027	0/0:20,0:20:54.18:0,54,892	0/0:20,0:20:36.12:0,36,602	0/0:27,0:27:32.49:0,32,511	0/0:24,0:24:52.04:0,52,829	0/0:18,1:18:6.89:0,7,607	0/0:22,0:21:53.97:0,54,903	0/0:112,3:115:99:0,173,4399	0/0:25,0:25:29.59:0,30,474	0/0:19,0:19:30.10:0,30,496	0/0:36,0:36:30.08:0,30,475	0/0:18,0:17:39.12:0,39,624	0/0:24,0:24:66.23:0,66,1100	0/0:15,0:15:42.14:0,42,702	0/0:18,0:18:34.40:0,34,634
chr10	94323597	.	ATG	A	1995.40	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=8.663;DP=739;FS=0.424;HRun=0;HaplotypeScore=180.2754;InbreedingCoeff=0.6020;MQ=49.67;MQ0=18;MQRankSum=-2.165;QD=6.95;ReadPosRankSum=0.906;VQSLOD=3.3611;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:40,2:42:1.78:257,2,0	1/1:8,0:8:17.82:143,18,0	0/0:41,0:4:6.02:0,6,95	0/0:34,0:6:3.01:0,3,43	1/1:10,0:9:23.11:172,23,0	1/1:20,0:20:2.24:7,2,0	0/0:22,0:22:8.83:0,9,71	0/0:39,0:37:41.97:0,42,933	1/1:17,0:17:22.43:232,22,0	1/1:24,0:21:20.96:257,21,0	1/1:13,0:13:5.53:59,6,0	0/0:33,0:33:3.38:0,3,69	0/1:28,0:29:33.21:33,0,88	0/0:25,0:25:5.97:0,6,50	1/1:18,0:18:29.67:251,30,0	1/1:15,1:16:20.94:150,21,0	0/0:23,0:22:0.83:0,1,15	1/1:26,0:26:30.98:313,31,0	0/0:24,0:20:0.73:0,1,457	0/0:25,0:24:50.95:0,51,779	0/0:101,0:99:99:0,228,3058	0/0:21,0:21:8.48:0,8,71	0/0:20,1:21:5.99:0,6,48	0/1:28,0:28:0:0,0,0	1/1:22,0:22:42.67:305,43,0	0/0:26,0:25:69.20:0,69,976	0/0:17,0:17:33.06:0,33,451	0/1:14,0:14:6.61:7,0,307
chr10	94323612	.	TGC	T	1374.92	PASS	AB=0.977;AC=25;AF=0.463;AN=54;BaseQRankSum=7.750;DP=677;FS=0.000;HRun=0;HaplotypeScore=186.7561;InbreedingCoeff=0.3523;MQ=51.48;MQ0=9;MQRankSum=-4.248;QD=3.54;ReadPosRankSum=-0.070;VQSLOD=2.7546;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,25:40:62.76:703,63,0	0/1:8,0:8:1.90:2,0,19	0/0:14,0:6:4.81:0,5,88	0/1:24,0:5:12.55:13,0,29	0/1:10,0:9:12.40:14,0,12	1/1:22,0:22:13.42:97,13,0	1/1:25,0:26:20.81:153,21,0	0/0:32,0:32:49.85:0,50,601	0/1:15,0:15:19.44:19,0,33	0/1:23,0:22:15.96:16,0,95	0/0:14,0:14:8.94:0,9,48	1/1:34,0:34:17.72:118,18,0	1/1:36,0:36:38.57:267,39,0	1/1:21,0:21:2.96:19,3,0	0/1:20,0:20:1.91:2,0,99	0/1:14,0:14:2.13:2,0,10	1/1:19,0:20:14.78:100,15,0	0/1:24,0:25:23.04:23,0,29	0/0:16,0:15:26.36:0,26,383	0/0:23,0:23:56.95:0,57,667	0/0:86,0:84:99:0,166,2289	0/1:21,0:21:0.03:0,0,0	./.	1/1:22,0:23:0.47:1,0,0	0/0:28,0:28:1.19:0,1,29	0/0:27,0:27:65.27:0,65,866	0/0:14,0:14:38.92:0,39,469	0/0:12,0:12:10.92:0,11,267
chr10	94323616	.	CGCGCGT	C	1056.77	PASS	AB=0.832;AC=13;AF=0.232;AN=56;BaseQRankSum=6.803;DP=665;FS=15.358;HRun=0;HaplotypeScore=216.2730;InbreedingCoeff=0.6497;MQ=52.56;MQ0=7;MQRankSum=-7.353;QD=4.98;ReadPosRankSum=-0.057;VQSLOD=1.2397;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:13.77:0,14,649	0/0:10,0:10:21.07:0,21,479	0/0:12,0:7:18.31:0,18,375	0/1:24,0:5:22.93:23,0,186	0/0:11,0:10:23.54:0,24,411	1/1:15,7:23:10.45:116,10,0	0/1:11,15:26:3.54:159,0,4	0/0:28,0:28:77.04:0,77,1897	0/0:15,0:15:36.61:0,37,546	0/0:19,0:19:51.42:0,51,954	0/0:16,0:17:15.05:0,15,344	1/1:26,7:33:17.76:213,18,0	1/1:28,8:37:4.19:436,4,0	1/1:16,6:22:3.01:48,3,0	0/0:20,0:20:42.87:0,43,688	0/0:15,0:15:23.87:0,24,486	1/1:21,1:22:17.91:222,18,0	0/0:25,0:25:8.51:0,9,807	0/0:17,0:16:18.21:0,18,1001	0/0:21,0:21:57.19:0,57,1598	0/0:79,0:77:99:0,195,5154	0/0:20,2:22:2.01:0,2,20	0/0:16,3:19:0:0,0,0	0/1:21,4:25:0.05:0,0,0	0/0:31,0:31:43.96:0,44,871	0/0:27,0:27:78.21:0,78,2094	0/0:15,0:15:45.15:0,45,1344	0/0:9,0:9:25.64:0,26,743
chr10	94323618	.	CGCGT	C	1734.10	PASS	AB=0.768;AC=18;AF=0.321;AN=56;BaseQRankSum=4.461;DP=657;FS=5.861;HRun=0;HaplotypeScore=196.7787;InbreedingCoeff=0.6464;MQ=52.77;MQ0=7;MQRankSum=-5.106;QD=6.02;ReadPosRankSum=-2.495;VQSLOD=1.9471;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:39:84.45:84,0,95	0/0:3,0:10:20.83:0,21,217	0/0:13,0:7:20.03:0,20,276	0/0:22,0:6:0.95:0,1,175	0/0:5,0:11:6.10:0,6,154	1/1:11,11:23:14.87:204,15,0	1/1:21,2:23:20.84:252,21,0	0/0:29,0:29:41.30:0,41,1220	0/0:11,0:15:6.09:0,6,216	0/0:8,0:22:28.72:0,29,590	0/0:3,0:17:15.01:0,15,156	1/1:8,24:33:17.88:327,18,0	1/1:9,24:33:40.81:733,41,0	1/1:7,15:22:3.01:41,3,0	0/0:14,0:20:21.05:0,21,502	0/0:3,0:15:11.80:0,12,208	1/1:4,18:22:17.86:259,18,0	0/1:6,0:24:4.20:4,0,309	0/0:17,0:16:12.54:0,13,654	0/0:22,0:22:60:0,60,1118	0/0:74,0:72:99:0,169,3460	0/1:3,20:23:0.05:1,0,0	0/1:3,18:21:0.33:0,0,0	1/1:6,18:25:0.39:1,0,0	0/0:4,0:31:29.27:0,29,401	0/0:25,0:25:72.11:0,72,1460	0/0:15,0:15:45.08:0,45,939	0/0:9,0:9:11.24:0,11,523
chr10	94323620	.	C	CGTGT	4341.59	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=2.033;DP=641;FS=4.900;HRun=0;HaplotypeScore=188.7690;InbreedingCoeff=0.5971;MQ=53.84;MQ0=6;MQRankSum=1.981;QD=15.07;ReadPosRankSum=0.329;VQSLOD=4.4283;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:41.75:0,42,486	1/1:10,0:10:17.27:309,17,0	0/1:13,0:8:4.95:5,0,206	0/1:24,0:8:22.42:22,0,173	1/1:11,1:11:15.05:265,15,0	0/0:22,0:23:5.57:0,6,55	0/0:23,0:23:8.24:0,8,73	0/0:28,0:28:42.13:0,42,655	1/1:11,2:13:16.78:259,17,0	1/1:24,0:24:15.28:731,15,0	0/1:17,0:17:10.79:173,0,11	0/0:31,0:32:17.60:0,18,138	0/0:33,0:33:35.95:0,36,312	0/0:22,0:22:2.96:0,3,28	1/1:18,1:19:44.74:799,45,0	1/1:13,0:13:20.55:322,21,0	0/1:21,0:21:33.15:33,0,86	1/1:23,0:23:35.75:599,36,0	0/0:16,0:15:30.08:0,30,426	0/0:21,0:21:36.08:0,36,530	0/0:67,0:65:99:0,105,1717	1/1:22,0:22:0.41:0,0,0	0/1:21,0:21:0:0,0,0	1/1:24,0:24:0.39:1,0,0	1/1:31,1:32:45.11:823,45,0	0/0:24,0:24:54.18:0,54,887	0/0:17,0:17:36.10:0,36,572	0/0:9,0:9:21.07:0,21,354
chr10	94324500	.	GT	G	4019.85	PASS	AB=0.951;AC=21;AF=0.375;AN=56;BaseQRankSum=-2.984;DP=608;FS=5.755;HRun=10;HaplotypeScore=77.6585;InbreedingCoeff=0.7614;MQ=80.93;MQ0=0;MQRankSum=0.393;QD=16.68;ReadPosRankSum=1.089;VQSLOD=4.2154;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:58.06:0,58,380	1/1:1,6:7:14.96:130,15,0	0/1:20,2:22:18.42:18,0,269	0/1:14,1:14:25.76:26,0,125	1/1:5,26:31:38.72:558,39,0	0/0:24,0:24:35.30:0,35,302	0/0:14,0:14:8.42:0,8,126	0/0:36,0:37:74.99:0,75,781	1/1:2,20:22:56.98:494,57,0	1/1:3,24:28:40.83:571,41,0	1/1:3,11:14:35.98:310,36,0	0/0:17,0:17:16.60:0,17,174	0/0:27,0:27:56.71:0,57,409	0/0:19,0:19:27.72:0,28,253	1/1:3,23:26:68.98:599,69,0	1/1:5,23:28:62.97:547,63,0	0/0:23,0:22:35.80:0,36,289	1/1:2,15:17:41.99:364,42,0	0/0:25,0:25:57.12:0,57,606	0/0:32,1:34:67.03:0,67,936	0/0:16,0:16:45.12:0,45,498	0/0:20,0:20:21.27:0,21,250	0/0:15,0:15:17.89:0,18,179	0/1:13,0:13:12.43:12,0,122	1/1:4,14:18:44.98:389,45,0	0/0:34,1:36:63.97:0,64,890	0/0:28,0:28:78.19:0,78,850	0/0:9,0:9:27.07:0,27,299
chr10	94326121	.	GCACACACACA	G	9988.11	PASS	AB=0.764;AC=37;AF=0.661;AN=56;BaseQRankSum=9.720;DP=602;FS=9.708;HRun=0;HaplotypeScore=168.7472;InbreedingCoeff=0.7195;MQ=48.74;MQ0=10;MQRankSum=-7.896;QD=24.97;ReadPosRankSum=4.243;VQSLOD=3.4065;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:38:1.91:2,0,158	1/1:1,6:7:9.50:236,10,0	0/0:31,0:13:11.12:0,11,174	0/0:33,0:13:15.01:0,15,183	1/1:2,11:14:18.03:319,18,0	1/1:4,15:20:35.61:777,36,0	1/1:10,14:23:21.07:561,21,0	0/0:29,0:28:51.16:0,51,1062	1/1:1,18:19:30.01:752,30,0	1/1:9,16:24:48.01:971,48,0	1/1:2,14:17:32.98:583,33,0	1/1:8,17:26:33.11:818,33,0	1/1:2,8:11:21.07:474,21,0	1/1:5,23:28:27.09:722,27,0	1/1:5,23:28:33.11:788,33,0	1/1:4,17:21:27.09:694,27,0	0/1:10,8:18:17.48:222,0,17	1/1:7,14:22:14.65:394,15,0	0/0:20,0:17:45.03:0,45,1477	0/0:18,0:20:48.15:0,48,1429	0/0:42,0:45:71.87:0,72,2814	1/1:2,4:6:6.02:118,6,0	1/1:6,8:14:14.92:286,15,0	1/1:8,10:19:3.86:72,4,0	1/1:10,21:30:48.16:1136,48,0	0/1:9,1:11:62.39:62,0,833	0/0:20,0:19:48.16:0,48,1722	0/0:4,0:4:6.02:0,6,291
chr10	94327343	.	CA	C	8548.80	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.119;DP=656;FS=12.217;HRun=1;HaplotypeScore=66.5238;InbreedingCoeff=0.9985;MQ=75.45;MQ0=1;MQRankSum=-0.175;QD=38.51;ReadPosRankSum=2.403;VQSLOD=4.6647;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:81.28:0,81,1294	1/1:0,6:6:18.06:251,18,0	0/0:13,0:13:39.13:0,39,624	0/0:12,0:12:30.08:0,30,449	1/1:0,40:40:99:1592,114,0	0/0:38,0:37:99:0,114,1822	0/0:17,0:17:51.16:0,51,789	0/0:33,0:33:96.33:0,96,1533	1/1:0,30:30:87.29:1215,87,0	1/1:0,34:34:99:1406,102,0	1/1:0,32:32:83.89:1173,84,0	0/0:26,0:26:78.18:0,78,1193	0/0:28,0:28:84.26:0,84,1316	0/0:29,0:29:87.28:0,87,1366	1/1:0,21:21:60.20:838,60,0	1/1:0,25:25:63.17:858,63,0	0/0:11,0:11:33.11:0,33,528	1/1:0,14:14:36.12:503,36,0	0/0:17,0:16:51.16:0,51,774	0/0:28,0:28:84.26:0,84,1296	0/0:11,0:11:33.10:0,33,504	0/0:13,0:13:39.13:0,39,622	0/0:24,0:24:72.23:0,72,1125	0/0:10,0:10:30.10:0,30,475	1/1:0,20:20:51.17:712,51,0	0/0:33,0:33:99:0,99,1582	0/0:36,0:36:99:0,108,1723	0/0:27,0:27:78.21:0,78,1206
chr10	94327741	.	CT	C	14509.63	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=17.767;DP=617;FS=4.041;HRun=2;HaplotypeScore=98.2257;InbreedingCoeff=0.9999;MQ=76.17;MQ0=0;MQRankSum=-4.434;QD=36.64;ReadPosRankSum=6.802;VQSLOD=4.5601;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:75.24:973,75,0	1/1:0,12:12:36.12:467,36,0	0/0:20,0:20:60.20:0,60,898	0/0:20,0:19:51.12:0,51,704	1/1:0,34:34:99:1284,99,0	1/1:0,22:22:63.20:818,63,0	1/1:0,14:14:42.14:545,42,0	0/0:46,0:46:99:0,138,2069	1/1:1,32:33:90.29:1169,90,0	1/1:0,22:22:63.19:804,63,0	1/1:1,25:26:72.23:934,72,0	1/1:0,13:13:39.13:506,39,0	1/1:0,14:14:42.14:545,42,0	1/1:0,23:23:66.21:857,66,0	1/1:0,18:18:51.17:662,51,0	1/1:0,24:24:69.22:896,69,0	1/1:0,19:19:51.17:662,51,0	1/1:1,17:18:45.15:584,45,0	0/0:31,0:31:93.32:0,93,1394	0/0:29,0:29:87.29:0,87,1304	0/0:18,0:18:54.18:0,54,808	1/1:1,12:13:36.12:466,36,0	1/1:0,21:21:57.19:740,57,0	1/1:0,23:23:66.21:857,66,0	1/1:0,20:20:57.19:740,57,0	0/0:19,0:19:57.19:0,57,850	0/0:28,0:28:84.27:0,84,1236	0/0:10,0:10:30.08:0,30,429
chr10	94328006	.	AT	A	11944.60	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=11.716;DP=543;FS=4.060;HRun=3;HaplotypeScore=66.1848;InbreedingCoeff=0.9979;MQ=84.65;MQ0=0;MQRankSum=-4.419;QD=34.23;ReadPosRankSum=6.727;VQSLOD=4.8338;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:99:1413,114,0	1/1:0,8:8:24.08:298,24,0	0/0:33,0:33:87.03:0,87,1214	0/0:26,0:26:69.23:0,69,987	1/1:0,24:24:66.21:818,66,0	1/1:0,24:24:69.22:856,69,0	1/1:1,19:20:54.17:669,54,0	0/0:27,0:27:78.26:0,78,1108	1/1:0,6:6:18.06:223,18,0	1/1:0,16:16:48.14:583,48,0	1/1:1,18:19:51.16:630,51,0	1/1:0,21:21:60.19:744,60,0	1/1:1,17:18:48.15:595,48,0	1/1:0,20:20:57.18:707,57,0	1/1:1,14:15:42.13:521,42,0	1/1:0,14:14:39.12:483,39,0	1/1:2,16:18:42.11:506,42,0	1/1:0,19:19:48.15:595,48,0	0/0:18,0:18:54.17:0,54,753	0/0:14,0:14:39.09:0,39,538	0/0:21,0:21:63.21:0,63,907	1/1:0,9:9:24.07:297,24,0	1/1:0,13:13:39.12:484,39,0	1/1:2,15:17:39.12:483,39,0	1/1:1,29:30:84.26:1041,84,0	0/0:19,0:19:54.17:0,54,762	0/0:27,0:27:78.22:0,78,1100	0/0:9,0:9:27.09:0,27,389
chr10	94328087	.	GCACA	G	361.26	PASS	AB=1.000;AC=25;AF=0.893;AN=28;BaseQRankSum=0.964;DP=346;FS=5.315;HRun=0;HaplotypeScore=105.3795;InbreedingCoeff=-0.0102;MQ=48.67;MQ0=23;MQRankSum=-1.735;QD=1.93;ReadPosRankSum=1.542;VQSLOD=1.6349;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	1/1:14,0:15:2.53:27,3,0	./.	./.	./.	./.	0/1:18,0:15:0:0,0,0	1/1:9,0:10:3:28,3,0	1/1:11,0:12:6.01:55,6,0	1/1:4,0:5:3:28,3,0	1/1:8,0:8:3:28,3,0	./.	0/1:16,0:15:0:0,0,0	1/1:11,0:9:3:28,3,0	1/1:13,0:13:3.01:38,3,0	./.	0/1:20,0:16:17.39:37,0,17	1/1:7,0:6:3:28,3,0	./.	./.	1/1:12,0:12:3:28,3,0	1/1:17,1:15:8.97:82,9,0	1/1:11,5:16:6.61:33,7,0	./.
chr10	94329282	.	CT	C	12841.68	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=13.634;DP=735;FS=7.833;HRun=7;HaplotypeScore=73.8073;InbreedingCoeff=0.9980;MQ=75.09;MQ0=0;MQRankSum=-2.832;QD=26.98;ReadPosRankSum=6.747;VQSLOD=4.7337;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:69.16:704,69,0	1/1:1,8:9:24.05:245,24,0	0/0:39,0:37:92.44:0,92,1073	0/0:20,0:17:23.64:0,24,397	1/1:2,34:36:99:1041,102,0	1/1:2,14:16:39.09:398,39,0	1/1:0,21:21:57.13:582,57,0	0/0:38,0:38:99:0,108,1348	1/1:0,23:23:69.16:704,69,0	1/1:1,27:28:81.16:813,81,0	1/1:0,25:25:66.15:673,66,0	1/1:1,24:25:66.15:673,66,0	1/1:4,31:35:87.20:888,87,0	1/1:1,29:30:84.19:857,84,0	1/1:4,39:43:99:1071,105,0	1/1:1,29:30:81.18:826,81,0	1/1:3,17:20:45.10:459,45,0	1/1:1,15:16:42.10:428,42,0	0/0:18,0:18:54.16:0,54,668	0/0:37,0:37:99:0,105,1297	0/0:33,0:33:87.28:0,87,1094	1/1:0,23:23:66.15:673,66,0	1/1:0,23:23:60.14:612,60,0	1/1:2,16:18:42.09:428,42,0	1/1:3,26:29:75.17:765,75,0	0/0:25,0:25:69.21:0,69,858	0/0:42,0:42:99:0,120,1485	0/0:7,0:7:18.06:0,18,226
chr10	94330006	.	A	AT	16095.95	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-15.158;DP=696;FS=11.549;HRun=5;HaplotypeScore=64.1869;InbreedingCoeff=0.9979;MQ=76.46;MQ0=0;MQRankSum=-3.793;QD=34.10;ReadPosRankSum=4.100;VQSLOD=4.5044;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:66.17:844,66,0	1/1:1,13:14:39.13:513,39,0	0/0:28,0:27:66.89:0,67,735	0/0:19,0:17:47.18:0,47,462	1/1:3,33:36:99:1300,99,0	1/1:1,25:26:69.22:908,69,0	1/1:1,16:17:42.14:553,42,0	0/0:42,0:42:99:0,108,1154	1/1:1,24:25:66.21:869,66,0	1/1:3,34:37:99:1361,105,0	1/1:2,15:17:45.10:573,45,0	1/1:2,20:22:48.16:631,48,0	1/1:2,18:20:42.14:553,42,0	1/1:0,35:35:99:1381,105,0	1/1:2,42:44:99:1539,117,0	1/1:0,23:23:63.20:829,63,0	1/1:3,16:19:42.14:552,42,0	1/1:0,28:28:66.21:868,66,0	0/0:20,0:20:54.13:0,54,580	0/0:38,0:38:99:0,99,1051	0/0:10,0:10:27.07:0,27,290	1/1:0,24:24:60.20:789,60,0	1/1:1,25:26:69.18:888,69,0	1/1:1,7:8:18.06:237,18,0	1/1:2,24:26:69.22:908,69,0	0/0:27,1:28:44.71:0,45,822	0/0:31,0:30:90.23:0,90,967	0/0:7,0:7:21.05:0,21,226
chr10	94330156	.	AC	A	424.76	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.426;DP=758;FS=0.000;HRun=6;HaplotypeScore=76.8369;InbreedingCoeff=0.9998;MQ=86.04;MQ0=0;MQRankSum=-1.881;QD=21.24;ReadPosRankSum=-1.495;VQSLOD=2.5476;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:51.01:520,51,0	0/0:14,0:14:42.12:0,42,537	0/0:25,0:25:36.93:0,37,624	0/0:30,0:30:76.73:0,77,852	0/0:26,0:26:75.24:0,75,977	0/0:23,0:23:66.10:0,66,831	0/0:26,0:26:78.24:0,78,1009	0/0:37,0:37:93.26:0,93,1151	0/0:23,0:23:63.19:0,63,814	0/0:24,0:24:63.20:0,63,816	0/0:27,0:27:69.21:0,69,893	0/0:23,0:23:69.21:0,69,885	0/0:27,0:27:78.19:0,78,977	0/0:26,0:26:78.22:0,78,983	0/0:44,0:44:99:0,126,1613	0/0:25,0:25:75.22:0,75,948	0/0:31,0:31:87.08:0,87,1077	0/0:33,0:33:90.28:0,90,1168	0/0:19,0:19:45.09:0,45,521	0/0:30,0:30:84.25:0,84,1077	0/0:23,0:23:66.17:0,66,848	0/0:42,0:42:99:0,120,1531	0/0:20,0:20:57.17:0,57,735	0/0:26,0:26:69.22:0,69,905	0/0:26,0:26:75.23:0,75,959	0/0:35,0:35:99:0,102,1342	0/0:34,0:34:90.28:0,90,1171	0/0:19,0:19:51.11:0,51,635
chr10	94330261	.	GGACA	G	5730.87	PASS	AB=0.591;AC=15;AF=0.268;AN=56;BaseQRankSum=18.911;DP=712;FS=1.437;HRun=0;HaplotypeScore=222.2671;InbreedingCoeff=0.5548;MQ=83.07;MQ0=0;MQRankSum=-17.548;QD=28.37;ReadPosRankSum=7.803;VQSLOD=4.4472;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:18:33.02:580,33,0	0/0:11,0:11:33.11:0,33,931	0/0:28,0:28:81.89:0,82,2198	0/0:24,0:24:69.24:0,69,1857	0/0:36,0:36:99:0,108,3092	1/1:1,19:22:30.22:717,30,0	0/1:1,10:13:4.04:359,0,4	0/0:29,0:29:87.30:0,87,2503	0/0:32,0:32:96.33:0,96,2753	0/0:34,0:34:99:0,102,2942	0/0:26,0:26:78.25:0,78,2148	1/1:2,27:29:80.27:1068,80,0	1/1:3,15:19:20.66:613,21,0	1/1:2,21:25:4.59:785,5,0	0/0:31,0:31:93.31:0,93,2632	0/0:34,0:34:99:0,102,2962	0/1:1,14:22:94.28:464,0,94	0/0:33,0:33:96.31:0,96,2689	0/0:22,0:22:66.21:0,66,1801	0/0:31,0:31:93.30:0,93,2637	0/0:34,0:34:99:0,102,2941	0/1:3,12:18:10.51:360,0,11	0/1:0,16:20:30.44:548,0,30	0/1:0,9:15:65.62:237,0,66	0/0:29,0:29:87.30:0,87,2523	0/0:22,0:22:66.23:0,66,1882	0/0:46,0:45:99:0,138,3819	0/0:8,0:8:21.07:0,21,607
chr10	94330266	.	TTTCTGCTGTTGG	T	16994.48	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=20.922;DP=725;FS=4.357;HRun=0;HaplotypeScore=315.9737;InbreedingCoeff=0.9988;MQ=83.01;MQ0=0;MQRankSum=-20.388;QD=78.68;ReadPosRankSum=3.421;VQSLOD=3.9880;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,15:21:53.53:1581,54,0	0/0:10,0:10:30.09:0,30,1690	0/0:29,0:29:86.95:0,87,4438	0/0:26,0:26:75.21:0,75,3143	0/0:39,0:39:99:0,117,7024	1/1:7,19:26:78.20:2064,78,0	1/1:5,10:15:45.11:1102,45,0	0/0:29,0:29:84.29:0,84,4787	0/0:30,0:30:90.31:0,90,5386	0/0:36,0:36:99:0,108,6206	0/0:24,0:24:72.25:0,72,4099	1/1:3,26:28:84.29:2587,84,0	1/1:4,15:19:57.17:1617,57,0	1/1:6,21:27:81.23:2189,81,0	0/0:30,0:30:90.31:0,90,5298	0/0:33,0:33:99:0,99,5657	1/1:10,14:24:72.18:1830,72,0	0/0:35,0:35:99:0,105,6299	0/0:20,0:20:60.21:0,60,3440	0/0:32,0:32:96.31:0,96,5374	0/0:38,0:38:99:0,114,6702	1/1:5,12:17:51.13:1228,51,0	1/1:4,16:20:60.20:1649,60,0	1/1:9,9:18:51.10:1147,51,0	0/0:28,0:28:84.29:0,84,4967	0/0:21,0:21:63.22:0,63,3852	0/0:42,0:41:99:0,126,7319	0/0:7,0:7:18.53:0,19,1093
chr10	94330269	.	CTG	C	2234.18	PASS	AB=0.945;AC=12;AF=0.214;AN=56;BaseQRankSum=19.360;DP=706;FS=8.201;HRun=0;HaplotypeScore=209.8706;InbreedingCoeff=0.1486;MQ=82.89;MQ0=0;MQRankSum=-18.712;QD=10.74;ReadPosRankSum=7.462;VQSLOD=1.4823;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:21,2:23:99:259,0,116	0/0:10,0:10:30.10:0,30,597	0/0:27,0:27:78.27:0,78,1549	0/0:26,0:26:65.79:0,66,1148	0/0:38,0:38:99:0,114,2315	0/1:25,1:26:99:319,0,120	0/1:15,0:15:99:121,0,110	0/0:31,0:31:90.28:0,90,1720	0/0:30,0:30:87.30:0,87,1755	0/0:34,0:34:99:0,102,2041	0/0:24,0:24:72.24:0,72,1412	1/1:29,0:29:18.11:372,18,0	0/1:20,0:20:43.06:186,0,43	0/1:25,0:25:42.76:228,0,43	0/0:30,0:30:90.31:0,90,1781	0/0:31,0:31:93.31:0,93,1842	0/1:18,4:22:63.80:330,0,64	0/0:34,0:34:99:0,102,2070	0/0:20,0:20:60.19:0,60,1181	0/0:30,0:30:90.31:0,90,1798	0/0:38,0:38:99:0,114,2231	0/1:15,0:15:37.73:135,0,38	1/1:18,0:18:36.05:242,36,0	0/1:12,3:15:25.88:206,0,26	0/0:28,0:28:84.27:0,84,1646	0/0:21,0:21:63.22:0,63,1279	0/0:39,0:39:99:0,117,2330	0/0:7,0:7:18.06:0,18,365
chr10	94330278	.	G	GT	4021.70	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=19.581;DP=731;FS=2.521;HRun=0;HaplotypeScore=190.1009;InbreedingCoeff=0.9973;MQ=79.55;MQ0=0;MQRankSum=-18.482;QD=17.26;ReadPosRankSum=3.793;VQSLOD=4.4568;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,6:25:59.37:436,59,0	0/0:10,0:10:30.10:0,30,420	0/0:25,0:25:72.24:0,72,1005	0/0:23,0:23:66.18:0,66,891	0/0:42,0:42:99:0,117,1602	1/1:19,8:27:70.44:480,70,0	1/1:10,10:20:49.02:426,49,0	0/0:30,0:30:87.27:0,87,1172	0/0:29,0:29:87.27:0,87,1196	0/0:39,0:39:99:0,108,1482	0/0:21,0:21:57.18:0,57,780	1/1:28,4:32:83.13:479,83,0	1/1:19,5:24:67.38:506,67,0	1/1:22,7:29:74.89:481,75,0	0/0:26,0:26:78.26:0,78,1091	0/0:30,0:30:90.30:0,90,1259	1/1:14,7:21:51.45:394,51,0	0/0:34,0:34:99:0,102,1402	0/0:22,0:22:66.20:0,66,890	0/0:33,0:33:99:0,99,1383	0/0:42,0:42:99:0,126,1722	1/1:12,7:19:42.89:377,43,0	1/1:19,1:20:49.49:272,49,0	1/1:10,6:16:27.71:171,28,0	0/0:25,0:25:72.24:0,72,1006	0/0:22,0:22:66.21:0,66,908	0/0:39,0:39:99:0,117,1633	0/0:6,0:6:14.88:0,15,208
chr10	94331654	.	AAC	A	1896.42	PASS	AB=0.794;AC=29;AF=0.558;AN=52;BaseQRankSum=0.105;DP=460;FS=4.994;HRun=0;HaplotypeScore=92.5693;InbreedingCoeff=0.5370;MQ=66.94;MQ0=6;MQRankSum=1.586;QD=8.17;ReadPosRankSum=1.866;VQSLOD=3.1950;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:38:2.77:0,3,26	./.	0/0:27,0:16:3.01:0,3,43	0/0:29,0:20:3.01:0,3,43	./.	1/1:8,12:20:24.06:267,24,0	1/1:9,7:16:18.05:200,18,0	1/1:16,0:22:14.67:71,15,0	0/0:20,0:20:2.27:0,2,30	0/0:10,0:11:9.41:0,9,68	0/1:8,0:8:0:0,0,0	1/1:6,9:16:17.88:181,18,0	1/1:6,5:11:6.02:67,6,0	1/1:6,9:17:17.92:182,18,0	0/0:21,0:21:6.01:0,6,68	0/0:17,0:16:3.01:0,3,37	0/0:14,0:28:33:0,33,314	0/0:14,0:13:3.01:0,3,41	1/1:5,0:5:2.84:14,3,0	1/1:3,1:9:17.21:103,17,0	1/1:15,0:28:28.41:140,28,0	1/1:6,6:14:23.60:209,24,0	1/1:3,2:5:6.02:67,6,0	1/1:11,12:24:35.66:360,36,0	0/0:12,0:13:3:0,3,26	0/1:6,1:9:12.40:61,0,12	1/1:7,0:17:25.57:126,26,0	0/1:4,0:8:19.23:19,0,30
chr10	94331820	.	CATAT	C	371.23	PASS	AB=0.737;AC=15;AF=0.536;AN=28;BaseQRankSum=-0.021;DP=208;FS=3.477;HRun=0;HaplotypeScore=48.6209;InbreedingCoeff=0.3348;MQ=54.27;MQ0=6;MQRankSum=3.158;QD=6.19;ReadPosRankSum=3.282;VQSLOD=1.4262;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	1/1:7,5:13:8.99:117,9,0	./.	0/0:19,0:19:26.95:0,27,362	0/0:5,0:5:3.01:0,3,50	0/0:5,0:5:3.01:0,3,63	./.	1/1:7,2:9:2.68:48,3,0	1/1:3,1:4:3.01:48,3,0	1/1:5,1:6:3.01:49,3,0	./.	./.	0/1:9,1:14:73.52:74,0,126	0/0:7,0:8:3.01:0,3,52	./.	./.	./.	1/1:3,2:5:3.01:49,3,0	1/1:2,3:5:6.02:94,6,0	./.	./.	1/1:4,0:4:0.47:1,0,0	0/0:9,0:9:2.99:0,3,24	0/0:5,0:5:2.95:0,3,22
chr10	94331872	.	GACACACACACAC	G	581.34	PASS	AB=0.563;AC=9;AF=0.188;AN=48;BaseQRankSum=3.379;DP=318;FS=12.021;HRun=0;HaplotypeScore=104.6556;InbreedingCoeff=0.6921;MQ=47.22;MQ0=6;MQRankSum=-3.854;QD=10.38;ReadPosRankSum=0.649;VQSLOD=1.2376;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:2,0:2:3.01:0,3,132	0/0:13,0:4:9.03:0,9,455	0/0:18,0:8:21.03:0,21,876	0/0:8,0:8:18.06:0,18,926	./.	0/0:3,4:7:0.47:0,0,1	0/0:16,0:14:27.09:0,27,918	0/0:10,0:10:27.09:0,27,1481	0/0:5,0:14:39.13:0,39,1480	0/0:3,0:7:15.05:0,15,523	1/1:3,6:9:3.01:105,3,0	1/1:1,12:13:9.03:295,9,0	./.	0/0:7,0:7:18.06:0,18,999	0/0:11,0:11:27.09:0,27,1393	1/1:12,2:14:9.03:294,9,0	0/0:11,0:12:30.10:0,30,1603	0/0:13,0:10:15.05:0,15,623	0/0:10,0:11:27.09:0,27,1358	0/0:16,0:15:36.04:0,36,1895	0/1:2,7:9:0:0,0,0	./.	1/1:7,2:9:1.20:2,1,0	0/0:5,0:5:6.02:0,6,329	0/0:13,0:14:39.13:0,39,2163	0/0:13,0:16:33.11:0,33,1572	0/0:8,0:12:24.97:0,25,1205
chr10	94331951	.	T	TACAC	1682.30	PASS	AB=0.983;AC=37;AF=0.804;AN=46;BaseQRankSum=0.064;DP=411;FS=6.174;HRun=0;HaplotypeScore=104.8046;InbreedingCoeff=0.4038;MQ=56.67;MQ0=6;MQRankSum=-0.913;QD=6.01;ReadPosRankSum=0.099;VQSLOD=1.9164;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:5.87:66,6,0	1/1:5,0:5:3.01:49,3,0	./.	./.	1/1:10,0:10:9:86,9,0	1/1:11,0:11:5.95:66,6,0	1/1:10,0:10:3:25,3,0	1/1:18,0:18:4.05:115,4,0	1/1:7,5:15:8.77:153,9,0	1/1:8,0:8:9.47:113,9,0	1/1:5,1:5:3.01:71,3,0	1/1:18,0:18:5.90:88,6,0	1/1:22,0:23:9.02:120,9,0	1/1:20,0:19:0.47:1,0,0	1/1:9,4:14:11.29:224,11,0	1/1:7,9:16:9.03:212,9,0	1/1:15,0:15:3.01:32,3,0	1/1:15,1:16:16.04:167,16,0	./.	0/0:13,0:13:9.03:0,9,138	0/0:43,0:42:16.26:0,16,214	0/1:11,0:11:0.04:0,0,0	./.	0/1:18,0:18:5.70:6,0,15	1/1:10,0:10:11.97:181,12,0	0/1:14,0:14:45.18:45,0,72	0/0:21,0:22:21.49:0,21,262	./.
chr10	94333516	.	T	TTGTGTGTGTG	5344.78	PASS	AC=28;AF=0.609;AN=46;BaseQRankSum=6.299;DP=468;FS=2.222;HRun=0;HaplotypeScore=156.5000;InbreedingCoeff=0.7526;MQ=56.34;MQ0=14;MQRankSum=-7.776;QD=23.75;ReadPosRankSum=-2.884;VQSLOD=4.1198;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:4,0:8:3.01:134,3,0	0/0:33,0:15:30.10:0,30,681	0/0:21,0:13:15.09:0,15,228	./.	1/1:23,0:23:2.98:143,3,0	1/1:18,0:15:17.73:459,18,0	0/0:35,0:33:54.51:0,55,1275	./.	1/1:12,0:14:15.02:405,15,0	./.	1/1:19,2:21:21.07:724,21,0	1/1:14,2:18:39.13:1373,39,0	1/1:9,5:14:12:375,12,0	1/1:11,0:12:3.01:50,3,0	1/1:12,0:16:3.01:119,3,0	1/1:9,0:15:18.06:483,18,0	1/1:5,0:6:15.05:459,15,0	0/0:15,0:15:3.05:0,3,325	0/0:17,0:17:33.11:0,33,846	0/0:5,0:5:9.03:0,9,230	1/1:7,6:13:3.01:105,3,0	1/1:17,0:16:6.20:260,6,0	1/1:17,2:18:7.24:255,7,0	./.	0/0:13,0:11:27.03:0,27,631	0/0:21,0:21:18.36:0,18,818	0/0:7,0:6:9.03:0,9,212
chr10	94333531	.	T	TGTGTGTGTGTGA	4217.41	PASS	AB=0.962;AC=36;AF=0.692;AN=52;BaseQRankSum=5.834;DP=438;FS=6.343;HRun=0;HaplotypeScore=150.3305;InbreedingCoeff=0.3604;MQ=45.20;MQ0=16;MQRankSum=-7.338;QD=14.25;ReadPosRankSum=0.010;VQSLOD=2.9997;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:2.76:23,3,0	1/1:8,0:8:3.90:20,4,0	0/0:27,0:10:30.10:0,30,681	0/0:18,0:10:14.72:0,15,227	./.	1/1:5,12:19:2.89:186,3,0	1/1:16,0:13:15.52:317,16,0	0/0:32,0:29:8.86:0,9,1224	1/1:11,0:12:3.47:27,3,0	1/1:13,0:10:20.94:617,21,0	1/1:8,0:9:3.47:26,3,0	1/1:21,0:19:18.06:686,18,0	1/1:20,0:20:39.02:1129,39,0	1/1:15,0:14:3.48:88,3,0	1/1:12,0:15:3.01:50,3,0	1/1:14,0:13:6.90:118,7,0	1/1:17,0:16:7.13:122,7,0	1/1:5,0:5:8.99:183,9,0	0/1:12,0:12:47.85:48,0,309	0/0:17,0:17:9.81:0,10,791	0/0:7,0:7:9.03:0,9,230	0/0:12,0:12:0:0,0,0	1/1:7,6:15:2.84:186,3,0	1/1:17,1:17:6.77:312,7,0	./.	0/1:15,0:13:6.30:6,0,653	0/1:18,0:22:66.83:67,0,832	0/1:7,0:5:6.99:7,0,193
chr10	94333572	.	G	GAGAGAA	3022.03	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=12.310;DP=549;FS=3.125;HRun=0;HaplotypeScore=173.4208;InbreedingCoeff=0.3139;MQ=65.85;MQ0=17;MQRankSum=-8.648;QD=9.91;ReadPosRankSum=-4.298;VQSLOD=1.9224;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:15:6.64:7,0,77	0/1:11,0:11:99:121,0,117	0/0:30,0:19:53.67:0,54,475	0/0:45,0:21:31.68:0,32,294	0/0:26,0:26:62.56:0,63,505	1/1:15,1:17:19.45:313,19,0	1/1:10,0:11:32.84:303,33,0	0/0:39,0:38:39.32:0,39,778	0/1:14,0:13:23.71:24,0,72	0/1:11,0:11:54.84:55,0,162	0/0:12,0:12:17.87:0,18,147	1/1:5,1:22:14.96:279,15,0	1/1:8,10:21:29.99:446,30,0	1/1:16,3:18:44.11:450,44,0	0/0:19,0:17:26.54:0,27,224	0/0:18,0:16:14.85:0,15,195	0/0:10,0:9:11.86:0,12,83	0/0:12,0:12:11.66:0,12,195	0/1:25,0:22:40.99:41,0,380	0/1:28,0:28:99:197,0,311	0/0:9,0:9:11.98:0,12,99	1/1:20,1:21:35.99:322,36,0	1/1:10,1:11:15.89:140,16,0	1/1:4,11:15:2.78:42,3,0	0/0:24,0:24:50.45:0,50,423	0/1:26,0:26:99:141,0,441	0/1:16,0:16:89.60:263,0,90	0/1:15,0:15:77.07:77,0,103
chr10	94334936	.	ATC	A	292.79	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.773;DP=494;FS=0.000;HRun=0;HaplotypeScore=92.5170;InbreedingCoeff=0.9931;MQ=67.38;MQ0=0;MQRankSum=-0.143;QD=22.52;ReadPosRankSum=1.654;VQSLOD=4.0702;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,11:13:27.09:387,27,0	0/0:14,0:14:42.14:0,42,770	0/0:13,0:13:39.07:0,39,573	0/0:12,0:12:23.51:0,24,344	0/0:24,0:24:72.25:0,72,1314	0/0:18,0:18:48.16:0,48,851	0/0:11,0:11:30.10:0,30,549	0/0:36,0:36:99:0,105,1878	0/0:12,0:12:33.11:0,33,605	0/0:26,0:26:72.25:0,72,1318	0/0:22,0:22:60.21:0,60,1099	0/0:17,0:17:45.15:0,45,821	0/0:26,0:26:72.25:0,72,1275	0/0:9,0:9:27.09:0,27,476	0/0:16,0:16:48.16:0,48,836	0/0:19,0:19:51.17:0,51,934	0/0:21,0:21:60.20:0,60,1080	0/0:13,0:13:36.10:0,36,627	0/0:14,0:14:33.07:0,33,565	0/0:24,0:24:72.25:0,72,1311	0/0:11,0:11:30.10:0,30,540	0/0:10,0:10:30.10:0,30,550	0/0:21,0:21:63.22:0,63,1147	0/0:13,0:13:39.13:0,39,708	0/0:23,0:23:69.22:0,69,1229	0/0:17,0:17:51.17:0,51,935	0/0:26,0:26:72.25:0,72,1319	0/0:13,0:13:33.11:0,33,605
chr10	94336170	.	CAA	C	4484.23	PASS	AB=0.903;AC=19;AF=0.339;AN=56;BaseQRankSum=-8.424;DP=600;FS=2.655;HRun=12;HaplotypeScore=101.4373;InbreedingCoeff=0.9134;MQ=75.40;MQ0=2;MQRankSum=1.436;QD=21.46;ReadPosRankSum=6.725;VQSLOD=4.3145;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:22:40.42:0,40,383	1/1:0,10:10:27.06:275,27,0	0/0:27,0:20:25.46:0,25,291	0/0:23,0:21:22.21:0,22,369	1/1:3,22:25:57.07:580,57,0	0/0:6,0:24:37.88:0,38,368	0/0:2,0:7:15.03:0,15,163	0/0:18,0:23:62.13:0,62,770	1/1:2,17:19:51.09:519,51,0	1/1:6,24:31:75.05:749,75,0	1/1:1,11:12:33.07:336,33,0	0/0:10,0:24:18.72:0,19,246	0/0:12,0:15:25.03:0,25,306	0/0:6,0:19:24.04:0,24,242	1/1:3,14:17:33.04:336,33,0	1/1:1,18:19:48.11:488,48,0	0/0:7,0:26:51.09:0,51,506	1/1:3,16:20:44.85:509,45,0	0/0:6,0:27:64.60:0,65,609	0/0:8,0:30:75.13:0,75,792	0/0:3,0:10:15.03:0,15,158	0/0:8,0:18:29.89:0,30,273	0/0:7,0:20:39.33:0,39,395	0/0:4,0:20:36.06:0,36,357	1/1:4,24:28:66.14:671,66,0	0/1:7,3:28:22.43:22,0,550	0/0:8,0:41:75.57:0,76,738	0/0:13,0:14:35.61:0,36,494
chr10	94337969	.	TA	T	2700.16	PASS	AB=0.567;AC=19;AF=0.339;AN=56;BaseQRankSum=14.515;DP=528;FS=9.562;HRun=10;HaplotypeScore=61.4717;InbreedingCoeff=0.9022;MQ=72.94;MQ0=0;MQRankSum=-0.768;QD=19.15;ReadPosRankSum=3.503;VQSLOD=4.2584;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:4,13:17:3.15:204,0,3	0/0:6,0:6:18.05:0,18,199	0/0:12,0:11:11.31:0,11,84	0/0:10,1:8:1.61:0,2,25	0/0:38,0:38:93.24:0,93,1018	1/1:4,12:16:26.99:234,27,0	1/1:0,8:8:18:156,18,0	0/0:26,0:26:63.16:0,63,691	0/0:11,0:11:27.07:0,27,299	0/0:36,0:36:93.24:0,93,1021	0/0:28,0:28:84.19:0,84,904	1/1:1,12:13:35.99:313,36,0	1/1:0,13:14:38.03:319,38,0	1/1:1,9:10:26.99:234,27,0	0/0:23,0:23:57.15:0,57,630	0/0:17,0:17:45.11:0,45,489	1/1:1,16:17:47.99:417,48,0	0/0:15,0:15:45.12:0,45,497	0/0:22,1:23:37.10:0,37,630	0/0:36,2:38:47.16:0,47,977	0/0:9,0:9:27.07:0,27,298	1/1:2,12:14:35.95:305,36,0	1/1:2,25:27:71.88:625,72,0	1/1:1,4:5:12:104,12,0	0/0:28,0:28:78.21:0,78,863	0/0:25,1:26:40.12:0,40,664	0/0:23,0:23:46.22:0,46,707	0/0:17,0:17:51.11:0,51,545
chr10	94339977	.	GTA	G	12818.01	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=15.055;DP=575;FS=4.091;HRun=0;HaplotypeScore=84.8995;InbreedingCoeff=0.9938;MQ=70.59;MQ0=1;MQRankSum=-2.765;QD=33.38;ReadPosRankSum=4.968;VQSLOD=6.9539;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:10:27.09:359,27,0	1/1:0,9:9:24.08:313,24,0	0/0:14,0:14:39.12:0,39,625	0/0:4,0:4:12.04:0,12,196	1/1:1,34:35:93.22:1190,93,0	1/1:4,18:22:45.15:599,45,0	1/1:1,17:18:42.14:559,42,0	0/0:36,0:36:84.29:0,84,1454	1/1:2,21:23:57.19:759,57,0	1/1:0,28:29:87.29:1159,87,0	1/1:2,28:30:78.17:992,78,0	1/1:2,23:25:69.23:918,69,0	1/1:2,16:18:33.11:439,33,0	1/1:0,19:19:54.18:719,54,0	1/1:0,28:28:78.26:1038,78,0	1/1:3,22:25:51.06:679,51,0	1/1:2,18:20:51.17:678,51,0	1/1:0,11:10:27.09:359,27,0	0/0:21,0:21:54.18:0,54,935	0/0:28,0:28:81.27:0,81,1365	0/0:14,0:14:39.13:0,39,657	1/1:1,16:17:39.13:511,39,0	1/1:1,21:22:51.03:674,51,0	1/1:0,7:7:21.07:280,21,0	1/1:0,16:16:45.15:593,45,0	0/0:28,1:29:41.32:0,41,1301	0/0:31,0:31:87.30:0,87,1505	0/0:14,0:14:39.13:0,39,675
chr10	94343780	.	G	GAC	92.20	PASS	AB=0.990;AC=15;AF=0.268;AN=56;BaseQRankSum=3.397;DP=546;FS=4.798;HRun=0;HaplotypeScore=236.4497;InbreedingCoeff=0.0513;MQ=42.47;MQ0=8;MQRankSum=0.201;QD=0.33;ReadPosRankSum=-3.838;VQSLOD=2.0293;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:5.34:0,5,76	0/1:15,0:15:1.73:2,0,29	0/1:25,0:4:2.04:2,0,47	0/0:34,0:6:3.24:0,3,19	0/0:34,1:35:3.18:0,3,8	0/0:16,0:17:4.14:0,4,126	1/1:19,1:19:3.20:14,3,0	0/0:11,0:11:16.13:0,16,252	0/0:14,0:14:5.41:0,5,51	0/1:35,0:35:53.88:54,0,253	1/1:36,0:36:2.84:11,3,0	0/0:13,0:13:1.10:0,1,32	0/0:17,0:17:7.28:0,7,240	0/0:17,0:17:2.26:0,2,34	0/0:15,0:15:5.95:0,6,59	0/0:17,0:17:3.83:0,4,102	0/1:10,0:10:0.02:0,0,205	0/0:6,0:6:14.65:0,15,139	0/0:12,0:11:29.17:0,29,295	0/1:28,0:28:0.05:0,0,20	0/0:6,0:6:0:0,0,0	0/1:23,0:23:0.02:0,0,0	0/1:16,1:17:0.04:0,0,0	0/1:11,0:10:0.02:0,0,0	0/0:33,0:33:1.92:0,2,7	0/1:34,2:36:99:101,0,460	0/1:16,0:16:10.78:11,0,101	0/1:7,0:7:7.67:8,0,74
chr10	94343788	.	C	CACAGAG	412.44	PASS	AB=0.979;AC=10;AF=0.179;AN=56;BaseQRankSum=4.429;DP=594;FS=0.000;HRun=0;HaplotypeScore=265.2004;InbreedingCoeff=0.2080;MQ=41.13;MQ0=14;MQRankSum=-1.065;QD=2.71;ReadPosRankSum=-1.761;VQSLOD=2.0669;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:7.66:0,8,94	0/1:15,1:16:18.98:19,0,24	0/0:36,0:5:7.51:0,8,187	0/0:44,0:6:5.26:0,5,60	0/0:36,1:37:1.02:0,1,3	0/0:19,0:19:10.04:0,10,148	1/1:20,0:19:1:10,1,0	0/0:13,0:13:28.56:0,29,425	0/0:14,0:14:9.87:0,10,84	0/1:36,1:37:99:371,0,414	0/0:32,4:36:2.43:0,2,6	0/0:13,0:13:2.77:0,3,42	0/0:19,0:19:25.43:0,25,421	0/0:17,0:17:4.26:0,4,22	0/0:15,0:15:6.69:0,7,106	0/0:19,0:19:19.09:0,19,163	0/0:10,0:10:18.94:0,19,262	0/0:6,0:6:15.01:0,15,217	0/0:15,0:14:8.92:0,9,419	0/0:29,0:28:7.06:0,7,80	1/1:7,0:7:0.47:1,0,0	1/1:23,0:23:1.04:9,1,0	0/0:17,0:17:0:0,0,1	0/1:12,0:11:0:0,0,0	0/0:34,0:34:3.30:0,3,10	0/1:37,0:37:99:111,0,680	0/0:19,0:19:9.16:0,9,274	0/0:8,0:8:11.87:0,12,112
chr10	94343789	.	AGTC	A	118.91	PASS	AB=0.895;AC=8;AF=0.143;AN=56;BaseQRankSum=2.022;DP=596;FS=0.000;HRun=0;HaplotypeScore=250.4038;InbreedingCoeff=0.1445;MQ=41.07;MQ0=15;MQRankSum=-1.637;QD=0.72;ReadPosRankSum=-2.466;VQSLOD=2.1483;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:3.05:0,3,38	0/1:16,0:16:6.75:7,0,26	0/0:38,0:6:17.21:0,17,280	0/0:45,0:6:1.81:0,2,59	0/1:29,8:37:9.11:17,0,9	0/0:18,0:19:10.86:0,11,74	0/0:18,0:19:2.79:0,3,11	0/0:13,0:13:32.63:0,33,322	0/0:11,1:14:6.99:0,7,73	0/1:25,9:37:99:180,0,360	0/0:28,5:36:2.21:0,2,37	0/0:13,0:13:3.95:0,4,31	0/0:19,0:19:32.31:0,32,223	1/1:17,0:17:4.12:13,4,0	0/0:12,3:15:0.52:0,1,47	0/0:18,1:19:17.73:0,18,159	0/0:10,0:10:17.52:0,18,133	0/0:6,0:6:6.42:0,6,37	0/0:15,0:14:35.32:0,35,306	0/0:29,0:28:2.92:0,3,39	0/1:7,0:7:0:0,0,0	0/0:21,0:23:0.83:0,1,3	0/1:16,0:17:0:0,0,0	0/0:12,0:11:0.43:0,0,0	0/1:28,4:34:1.73:2,0,15	0/0:35,0:37:90.57:0,91,794	0/0:17,2:19:21.40:0,21,196	0/0:8,0:8:3.33:0,3,100
chr10	94343790	.	GTCAT	G	4582.45	PASS	AB=0.848;AC=41;AF=0.732;AN=56;BaseQRankSum=-2.235;DP=594;FS=23.393;HRun=0;HaplotypeScore=238.1000;InbreedingCoeff=0.3157;MQ=41.12;MQ0=15;MQRankSum=-0.496;QD=10.68;ReadPosRankSum=4.574;VQSLOD=2.8330;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,6:20:5.53:71,6,0	0/1:11,5:16:12.04:41,0,12	0/0:38,0:6:10.86:0,11,181	0/0:45,0:6:8.91:0,9,51	0/1:32,4:37:8.45:11,0,8	1/1:19,0:19:8.48:88,8,0	1/1:20,0:19:1.85:33,2,0	1/1:12,1:13:35.92:364,36,0	1/1:10,4:14:9.55:82,10,0	1/1:31,5:37:94.92:1264,95,0	0/0:33,3:36:2.12:0,2,30	1/1:11,1:12:0.34:15,0,0	1/1:19,0:19:27.31:242,27,0	1/1:15,2:17:1.85:45,2,0	1/1:11,4:15:5.99:45,6,0	0/1:16,3:19:28.65:131,0,29	1/1:9,0:9:18.08:150,18,0	1/1:3,2:6:17.93:230,18,0	1/1:15,0:14:38.91:403,39,0	1/1:27,2:28:0.21:22,0,0	1/1:4,3:7:2.84:14,3,0	0/1:20,3:23:0.20:0,0,1	0/1:14,3:17:0:0,0,0	0/0:12,0:11:0.08:0,0,0	0/0:33,1:34:0.11:0,0,14	1/1:31,6:37:17.18:827,17,0	1/1:19,0:19:32.69:348,33,0	1/1:7,1:8:6.48:157,6,0
chr10	94343803	.	A	AGT	666.70	PASS	AB=0.983;AC=16;AF=0.286;AN=56;BaseQRankSum=4.700;DP=635;FS=12.423;HRun=0;HaplotypeScore=267.9355;InbreedingCoeff=-0.1188;MQ=40.37;MQ0=28;MQRankSum=0.231;QD=1.79;ReadPosRankSum=-0.452;VQSLOD=0.6947;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:6.11:0,6,72	0/1:18,0:18:14.37:36,0,14	0/1:38,0:6:1.57:2,0,97	0/0:45,0:6:4.15:0,4,48	0/1:40,0:39:2.42:2,0,7	0/0:21,0:20:8.81:0,9,94	0/0:23,0:22:3.25:0,3,36	0/0:16,1:15:0.65:0,1,348	0/1:18,1:18:11.10:95,0,11	0/1:39,1:37:99:216,0,395	0/1:33,0:33:0.93:1,0,14	0/0:16,0:16:4.14:0,4,57	0/1:20,0:19:14.81:15,0,182	0/0:21,0:20:2.77:0,3,23	0/0:15,0:15:2.82:0,3,37	1/1:18,1:19:15.06:161,15,0	0/1:11,0:11:10.46:10,0,102	0/0:7,0:7:14.73:0,15,159	0/0:14,0:14:37.25:0,37,350	0/0:31,0:30:6.16:0,6,65	0/0:12,0:10:1.55:0,2,4	0/1:22,1:23:0.21:0,0,0	0/0:17,0:16:0:0,0,0	0/1:13,0:12:0:0,0,0	0/1:35,0:35:6.36:7,0,6	0/1:35,1:36:64.17:64,0,359	0/1:19,0:19:99:121,0,177	0/1:8,1:9:59.57:67,0,60
chr10	94344692	.	AATAGATAG	A	1404.30	PASS	AB=1.000;AC=28;AF=0.583;AN=48;BaseQRankSum=-2.052;DP=587;FS=11.953;HRun=0;HaplotypeScore=159.6807;InbreedingCoeff=0.4930;MQ=71.07;MQ0=4;MQRankSum=0.085;QD=4.32;ReadPosRankSum=-0.564;VQSLOD=1.8926;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:8.91:0,9,70	1/1:4,0:4:2.98:22,3,0	./.	./.	1/1:22,0:22:1.57:5,2,0	0/0:21,0:23:17.96:0,18,147	./.	./.	0/1:26,0:26:13.46:16,0,13	1/1:24,0:24:3.01:72,3,0	1/1:18,1:19:15.05:198,15,0	0/0:16,0:16:6.49:0,6,90	0/1:22,0:22:83.06:197,0,83	0/0:19,0:19:9.03:0,9,303	1/1:21,0:21:16.94:215,17,0	1/1:28,0:28:10.04:84,10,0	1/1:13,1:13:15.05:219,15,0	0/1:10,0:9:0:0,0,0	0/0:22,0:23:2.99:0,3,24	1/1:18,12:30:27.04:359,27,0	1/1:19,7:26:3.01:36,3,0	0/0:12,0:13:5.98:0,6,47	0/0:11,0:17:11.33:0,11,161	0/1:19,0:19:0:0,0,0	1/1:33,0:33:5.99:54,6,0	0/0:20,0:24:14.99:0,15,152	1/1:18,6:24:3.01:72,3,0	1/1:1,0:3:3.07:12,3,0
chr10	94344752	.	G	GATTA	861.26	PASS	AB=0.941;AC=14;AF=0.250;AN=56;BaseQRankSum=10.908;DP=504;FS=1.037;HRun=0;HaplotypeScore=189.0199;InbreedingCoeff=-0.3441;MQ=48.32;MQ0=23;MQRankSum=-6.044;QD=3.65;ReadPosRankSum=-7.881;VQSLOD=0.0903;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:27:44.15:0,44,762	0/1:1,1:2:43.21:67,0,43	0/0:7,0:4:12.01:0,12,177	0/0:7,0:2:6.02:0,6,94	0/1:21,1:20:20.87:299,0,21	0/1:25,0:25:59.07:59,0,303	0/1:18,0:15:20.43:38,0,20	0/0:40,0:27:81.26:0,81,1321	0/1:9,2:11:62.18:62,0,159	0/0:18,0:17:51.16:0,51,847	0/0:19,0:19:20.16:0,20,328	0/1:10,0:10:22.83:23,0,41	0/1:23,0:23:62.47:62,0,264	0/1:23,0:23:99:123,0,190	0/1:15,0:12:24.32:24,0,266	0/0:14,0:13:19.17:0,19,300	0/1:15,0:14:15.97:16,0,142	0/1:10,0:9:25.89:26,0,267	0/0:16,0:14:36.12:0,36,585	0/0:34,0:34:90.29:0,90,1307	0/0:21,0:21:38.16:0,38,580	0/0:9,0:9:4.63:0,5,64	0/1:23,0:23:83.92:84,0,205	0/1:13,0:13:10.05:10,0,42	0/1:15,11:25:99:121,0,530	0/0:18,0:18:51.17:0,51,816	0/0:25,0:25:54.15:0,54,804	0/0:7,0:7:21.06:0,21,304
chr10	94344768	.	GATTAATAGATAC	G	5365.39	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=4.337;DP=535;FS=44.547;HRun=0;HaplotypeScore=254.9294;InbreedingCoeff=0.5272;MQ=54.18;MQ0=14;MQRankSum=-5.957;QD=18.76;ReadPosRankSum=0.253;VQSLOD=2.7773;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:26:15.49:988,15,0	1/1:5,0:5:9.03:179,9,0	0/0:12,0:8:11.90:0,12,254	0/0:15,0:8:18.05:0,18,336	0/0:6,20:24:12.75:0,13,39	0/1:25,0:25:13.26:108,0,13	1/1:18,0:15:1.02:31,1,0	0/0:37,0:35:36.05:0,36,911	0/1:11,0:11:16.13:295,0,16	1/1:17,0:16:29.07:867,29,0	0/0:3,17:20:12.71:0,13,36	1/1:10,0:11:6.59:64,7,0	1/1:26,0:26:7.65:183,8,0	0/1:23,0:23:78.40:78,0,149	1/1:14,0:11:23.90:437,24,0	1/1:12,0:11:30.07:649,30,0	0/1:15,0:14:39.33:58,0,39	1/1:13,0:12:18.06:414,18,0	0/0:18,0:17:36.02:0,36,872	0/0:36,0:36:58.18:0,58,1448	0/0:22,0:22:34.88:0,35,826	1/1:10,0:10:7.04:76,7,0	0/1:24,0:24:28.66:29,0,72	1/1:13,0:13:1.48:19,1,0	1/1:20,0:19:26.11:890,26,0	0/0:23,0:23:63.27:0,63,1522	0/0:24,0:24:46.06:0,46,1290	0/0:16,0:13:25.25:0,25,666
chr10	94344776	.	GATAC	G	6670.38	PASS	AB=0.957;AC=27;AF=0.482;AN=56;BaseQRankSum=15.187;DP=534;FS=33.230;HRun=0;HaplotypeScore=191.6471;InbreedingCoeff=0.4482;MQ=54.54;MQ0=12;MQRankSum=-7.735;QD=23.49;ReadPosRankSum=0.149;VQSLOD=3.0296;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:29:99:275,0,290	1/1:5,0:5:5.98:46,6,0	0/0:14,0:9:23.34:0,23,498	0/0:15,0:8:14.06:0,14,399	0/0:22,0:20:5.84:0,6,87	1/1:6,18:25:66.07:1016,66,0	1/1:11,4:13:14.84:395,15,0	0/0:41,0:41:99:0,120,2623	0/1:11,0:11:56.37:80,0,56	0/1:18,0:17:99:191,0,316	0/0:19,0:19:9.79:0,10,121	1/1:4,5:10:26.96:385,27,0	1/1:7,15:23:45.35:954,45,0	1/1:4,16:21:60.05:929,60,0	0/1:12,0:9:11.39:103,0,11	1/1:13,0:12:9.05:201,9,0	0/1:7,6:13:15.05:237,0,15	0/1:16,0:16:99:143,0,192	0/0:20,0:19:51.09:0,51,1176	0/0:36,0:36:93.11:0,93,2345	0/0:22,0:22:42.13:0,42,1031	1/1:7,6:13:32.92:426,33,0	1/1:8,16:24:59.95:858,60,0	1/1:2,5:14:8.57:177,9,0	0/1:18,0:17:99:253,0,118	0/0:23,0:23:68.95:0,69,1685	0/0:21,0:21:59.57:0,60,1543	0/0:17,0:14:32.48:0,32,809
chr10	94344814	.	TAGAC	T	3921.77	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=9.005;DP=599;FS=13.189;HRun=0;HaplotypeScore=178.2079;InbreedingCoeff=0.9591;MQ=59.63;MQ0=4;MQRankSum=-9.635;QD=26.68;ReadPosRankSum=-0.123;VQSLOD=2.2683;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:99:0,107,2735	0/0:10,0:10:30.10:0,30,778	0/0:26,0:24:65.59:0,66,1414	0/0:12,0:11:9.13:0,9,294	0/0:30,0:28:48.16:0,48,1229	1/1:1,29:30:42.14:733,42,0	1/1:3,10:13:24.08:425,24,0	0/0:35,0:35:88.90:0,89,1743	0/0:18,0:18:54.19:0,54,1392	0/0:24,0:24:69.23:0,69,1704	0/0:24,0:24:33.11:0,33,847	1/1:1,7:8:21.07:369,21,0	1/1:2,23:25:60.01:962,60,0	1/1:2,11:13:24.55:431,25,0	0/0:19,0:16:48.16:0,48,1231	0/0:24,0:23:66.20:0,66,1658	1/1:5,6:11:18.53:307,19,0	0/0:16,0:16:42.14:0,42,1088	0/0:20,0:19:48.16:0,48,1196	0/0:28,0:28:75.20:0,75,1756	0/0:22,0:22:60.18:0,60,1436	1/1:1,12:13:18.06:286,18,0	1/1:6,18:24:21.33:355,21,0	1/1:6,4:10:3.01:54,3,0	0/0:23,0:23:69.24:0,69,1735	0/0:29,0:29:75.21:0,75,1868	0/0:27,0:27:78.19:0,78,1776	0/0:24,0:23:60.16:0,60,1414
chr10	94345133	.	A	AT	1037.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.615;DP=712;FS=6.839;HRun=6;HaplotypeScore=80.5804;InbreedingCoeff=0.9823;MQ=69.86;MQ0=0;MQRankSum=-0.719;QD=29.63;ReadPosRankSum=0.994;VQSLOD=4.2309;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:35:90.29:1132,90,0	0/0:8,0:8:24.05:0,24,245	0/0:17,0:15:15.01:0,15,219	0/0:22,0:23:39.21:0,39,378	0/0:33,0:33:90.20:0,90,917	0/0:29,0:29:87.20:0,87,887	0/0:31,0:31:78.15:0,78,786	0/0:29,0:29:78.17:0,78,791	0/0:28,0:28:75.17:0,75,765	0/0:24,0:24:69.15:0,69,699	0/0:20,0:20:54.12:0,54,550	0/0:34,0:34:70:0,70,978	0/0:25,0:25:72.16:0,72,735	0/0:31,0:31:84.17:0,84,850	0/0:33,0:33:84.19:0,84,857	0/0:22,0:22:66.15:0,66,673	0/0:27,0:26:66.14:0,66,673	0/0:16,0:16:42.09:0,42,428	0/0:21,0:21:51.07:0,51,520	0/0:34,0:34:99:0,99,1010	0/0:27,0:27:78.18:0,78,795	0/0:16,0:16:42.09:0,42,428	0/0:27,0:27:69.13:0,69,691	0/0:32,0:32:84.19:0,84,856	0/0:22,0:22:57.07:0,57,563	0/0:22,0:22:63.14:0,63,643	0/0:28,0:28:78.18:0,78,796	0/0:18,0:18:54.12:0,54,551
chr10	94345543	.	AAT	A	1935.18	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.403;DP=464;FS=9.218;HRun=0;HaplotypeScore=72.7990;InbreedingCoeff=0.8872;MQ=65.40;MQ0=0;MQRankSum=-0.823;QD=40.32;ReadPosRankSum=-2.632;VQSLOD=4.0791;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1769	0/0:7,0:7:21.07:0,21,384	0/0:14,0:11:32.85:0,33,447	0/0:7,0:7:9.03:0,9,165	0/0:27,0:27:81.21:0,81,1402	0/0:18,0:18:51.15:0,51,887	0/0:10,0:10:30.09:0,30,489	1/1:0,34:34:99:1530,102,0	0/0:12,0:12:36.12:0,36,659	0/0:12,0:12:36.11:0,36,629	0/0:22,0:22:66.23:0,66,1208	0/0:15,0:15:42.13:0,42,707	0/0:11,0:11:30.10:0,30,548	0/0:10,0:10:30.08:0,30,489	0/0:19,0:19:57.18:0,57,1009	0/0:20,0:20:57.14:0,57,947	0/0:27,0:27:81.22:0,81,1378	0/0:18,0:18:51.12:0,51,828	0/0:22,0:22:60.10:0,60,968	0/0:15,0:15:41.70:0,42,652	0/0:8,0:8:21.07:0,21,384	0/0:1,0:1:2.96:0,3,19	0/0:11,0:11:33.10:0,33,536	0/0:14,0:14:36.10:0,36,620	0/0:17,0:17:51.17:0,51,929	0/0:19,0:19:54.18:0,54,973	0/0:26,0:26:78.24:0,78,1353	1/1:0,14:14:36.09:526,36,0
chr10	94346440	.	CT	C	446.67	PASS	AB=0.846;AC=3;AF=0.054;AN=56;BaseQRankSum=6.158;DP=439;FS=0.000;HRun=9;HaplotypeScore=43.7642;InbreedingCoeff=0.4943;MQ=76.75;MQ0=0;MQRankSum=-1.152;QD=14.89;ReadPosRankSum=-0.219;VQSLOD=3.0231;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:57.03:521,57,0	0/0:7,0:7:15.04:0,15,173	0/1:9,2:10:31.41:31,0,85	0/0:10,0:10:15:0,15,147	0/0:27,0:27:72.20:0,72,820	0/0:19,0:19:48.13:0,48,543	0/0:7,0:7:21.06:0,21,242	0/0:27,0:27:72.21:0,72,831	0/0:7,0:7:18.05:0,18,208	0/0:26,0:26:63.14:0,63,697	0/0:16,0:16:39.09:0,39,437	0/0:11,0:11:24.07:0,24,277	0/0:9,0:9:27.08:0,27,312	0/0:14,0:14:39.12:0,39,450	0/0:12,0:12:36.11:0,36,416	0/0:10,0:10:2.66:0,3,284	0/0:26,0:26:63.17:0,63,717	0/0:23,0:23:63.19:0,63,725	0/0:18,0:18:48.10:0,48,520	0/0:24,0:24:66.05:0,66,734	0/0:9,0:11:29.75:0,30,306	0/0:7,0:7:21.06:0,21,242	0/0:13,0:13:39.10:0,39,441	0/0:12,0:12:30.09:0,30,342	0/0:27,0:27:69.17:0,69,775	0/0:21,0:21:51.15:0,51,581	0/0:22,0:22:57.17:0,57,658	0/0:3,0:3:3.01:0,3,35
chr10	94346953	.	T	TA	9287.18	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=9.794;DP=714;FS=0.296;HRun=2;HaplotypeScore=83.0243;InbreedingCoeff=0.9893;MQ=89.40;MQ0=0;MQRankSum=-2.970;QD=38.86;ReadPosRankSum=0.793;VQSLOD=5.1629;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,166,2045	0/0:7,0:7:21.07:0,21,260	0/0:23,0:23:60.18:0,60,712	0/0:33,0:33:84.11:0,84,967	0/0:27,0:27:78.23:0,78,954	1/1:0,19:20:57.18:803,57,0	1/1:0,36:36:93.31:1339,93,0	0/0:32,0:32:93.27:0,93,1131	0/0:20,0:20:57.16:0,57,693	0/0:26,0:26:75.23:0,75,919	0/0:9,0:9:27.08:0,27,335	1/1:1,27:28:75.25:1080,75,0	1/1:3,28:31:84.27:1192,84,0	1/1:0,30:30:81.27:1166,81,0	0/0:24,0:24:72.21:0,72,880	0/0:35,0:35:99:0,102,1261	1/1:1,31:32:87.29:1253,87,0	0/0:20,1:21:19.95:0,20,682	0/0:25,0:25:72.20:0,72,856	0/0:20,0:20:60.19:0,60,744	0/0:46,0:46:99:0,126,1540	1/1:1,20:21:63.21:905,63,0	1/1:3,17:20:51.17:728,51,0	1/1:1,20:21:57.19:821,57,0	0/0:21,0:21:57.18:0,57,706	0/0:20,0:20:57.18:0,57,707	0/0:26,0:25:75.24:0,75,929	0/0:3,0:3:9.03:0,9,112
chr10	94347459	.	C	CA	4332.33	PASS	AB=0.565;AC=19;AF=0.339;AN=56;BaseQRankSum=1.130;DP=480;FS=7.218;HRun=6;HaplotypeScore=48.0285;InbreedingCoeff=0.9391;MQ=78.73;MQ0=0;MQRankSum=-0.133;QD=30.51;ReadPosRankSum=2.523;VQSLOD=5.3363;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:60.19:754,60,0	0/0:8,0:8:24.05:0,24,245	0/0:12,0:12:30.04:0,30,294	0/0:8,0:9:14.78:0,15,134	0/0:34,0:34:99:0,99,991	1/1:0,10:10:30.10:377,30,0	1/1:0,12:12:33.11:415,33,0	0/0:18,0:18:42.09:0,42,429	0/0:16,0:16:48.09:0,48,482	0/0:20,0:20:57.13:0,57,581	0/0:22,0:22:63.06:0,63,628	1/1:4,11:15:30.10:377,30,0	1/1:2,17:19:45.14:566,45,0	1/1:1,15:16:45.14:566,45,0	0/0:23,0:23:66.13:0,66,666	0/0:15,0:15:39.07:0,39,393	0/1:3,10:13:3.52:275,0,4	0/0:14,0:14:39.05:0,39,389	0/0:29,0:29:63.13:0,63,638	0/0:25,0:25:66.12:0,66,665	0/0:9,0:9:27.06:0,27,275	1/1:2,6:8:18.01:208,18,0	1/1:1,17:18:45.14:566,45,0	1/1:2,6:8:18.06:226,18,0	0/0:11,0:11:27.06:0,27,275	0/0:29,0:29:78.17:0,78,796	0/0:35,0:35:99:0,99,984	0/0:9,0:9:24.03:0,24,237
chr10	94347586	.	G	GA	6150.56	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-1.527;DP=571;FS=0.711;HRun=6;HaplotypeScore=61.6894;InbreedingCoeff=0.9995;MQ=81.97;MQ0=0;MQRankSum=-1.384;QD=32.20;ReadPosRankSum=2.682;VQSLOD=5.2938;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:27:63.16:775,63,0	0/0:11,0:11:33.07:0,33,335	0/0:15,0:15:32.98:0,33,314	0/0:16,0:16:35.72:0,36,330	0/0:22,0:22:54.12:0,54,550	1/1:1,15:16:36.12:453,36,0	1/1:0,13:13:33.11:415,33,0	0/0:27,0:26:53.09:0,53,519	0/0:16,0:16:39.08:0,39,398	0/0:23,0:23:57.12:0,57,581	0/0:25,0:25:66.14:0,66,673	1/1:2,17:19:45.14:564,45,0	1/1:1,24:25:66.10:830,66,0	1/1:1,13:14:36.12:453,36,0	0/0:22,0:22:60.14:0,60,612	0/0:27,0:27:75.17:0,75,763	1/1:2,13:15:36.07:435,36,0	0/0:23,0:23:66.15:0,66,672	0/0:27,0:27:71.89:0,72,710	0/0:34,0:34:87.19:0,87,887	0/0:12,0:12:36.08:0,36,367	1/1:1,20:21:57.18:716,57,0	1/1:0,28:28:81.26:1019,81,0	1/1:0,13:13:39.12:491,39,0	0/0:22,0:22:63.12:0,63,634	0/0:21,0:21:63.12:0,63,627	0/0:28,0:28:81.18:0,81,826	0/0:9,0:9:24.05:0,24,245
chr10	94347822	.	A	AC	9286.85	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-16.714;DP=611;FS=9.261;HRun=2;HaplotypeScore=59.2856;InbreedingCoeff=0.9953;MQ=81.92;MQ0=0;MQRankSum=-2.256;QD=38.86;ReadPosRankSum=3.150;VQSLOD=5.1524;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:44:99:1814,126,0	0/0:4,0:4:12.04:0,12,149	0/0:15,0:15:36.01:0,36,425	0/0:22,0:22:51.43:0,51,540	0/0:33,0:33:99:0,99,1204	1/1:0,30:30:78.26:1123,78,0	1/1:0,26:26:66.22:951,66,0	0/0:28,0:28:78.21:0,78,927	0/0:28,0:28:75.23:0,75,919	0/0:19,0:19:57.17:0,57,698	0/0:13,0:13:36.10:0,36,433	1/1:1,23:24:63.21:907,63,0	1/1:0,16:16:45.15:648,45,0	1/1:0,19:19:51.17:735,51,0	0/0:35,0:35:99:0,105,1289	0/0:27,0:27:78.21:0,78,931	1/1:0,23:23:60.20:864,60,0	0/0:18,0:18:51.12:0,51,615	0/0:17,0:17:51.14:0,51,618	0/0:25,0:25:72.23:0,72,892	0/0:29,0:29:81.25:0,81,1004	1/1:0,12:12:30.10:432,30,0	1/1:0,17:17:51.17:734,51,0	1/1:2,26:28:75.25:1080,75,0	0/0:14,0:14:42.13:0,42,520	0/0:18,0:18:51.16:0,51,632	0/0:15,0:15:42.12:0,42,507	0/0:12,0:12:36.11:0,36,446
chr10	94349079	.	T	TA	1227.56	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=10.221;DP=718;FS=7.400;HRun=0;HaplotypeScore=77.4531;InbreedingCoeff=0.9968;MQ=91.94;MQ0=0;MQRankSum=-4.825;QD=29.94;ReadPosRankSum=1.361;VQSLOD=3.2089;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,39:41:99:1322,114,0	0/0:12,0:12:36.11:0,36,487	0/0:35,0:34:95.89:0,96,1243	0/0:25,0:25:75.16:0,75,952	0/0:24,0:24:72.23:0,72,988	0/0:34,0:34:96.32:0,96,1341	0/0:30,0:30:90.27:0,90,1216	0/0:26,0:26:78.25:0,78,1076	0/0:25,0:25:75.24:0,75,1034	0/0:22,0:22:63.21:0,63,881	0/0:23,0:23:66.21:0,66,906	0/0:18,0:18:54.17:0,54,739	0/0:21,0:21:63.21:0,63,881	0/0:38,0:38:99:0,114,1578	0/0:42,0:42:99:0,123,1689	0/0:22,0:22:66.21:0,66,906	0/0:40,0:40:99:0,117,1579	0/0:8,0:8:24.08:0,24,335	0/0:21,0:21:63.16:0,63,845	0/0:25,0:25:72.24:0,72,1005	0/0:37,0:37:99:0,111,1503	0/0:19,0:19:57.18:0,57,782	0/0:24,0:24:69.22:0,69,948	0/0:20,0:20:60.03:0,60,808	0/0:22,0:22:63.21:0,63,881	0/0:29,0:29:87.29:0,87,1217	0/0:26,0:26:78.25:0,78,1074	0/0:9,0:9:27.09:0,27,377
chr10	94349082	.	G	GC	1321.40	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=10.220;DP=715;FS=7.300;HRun=0;HaplotypeScore=77.9282;InbreedingCoeff=0.9967;MQ=90.09;MQ0=0;MQRankSum=-5.167;QD=29.36;ReadPosRankSum=0.430;VQSLOD=3.4034;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,39:45:99:1416,114,0	0/0:12,0:12:33.11:0,33,462	0/0:32,0:31:80.90:0,81,1127	0/0:24,0:24:69.20:0,69,929	0/0:24,0:24:69.23:0,69,965	0/0:33,0:33:96.31:0,96,1324	0/0:30,0:30:87.27:0,87,1198	0/0:27,0:27:81.26:0,81,1116	0/0:24,0:24:72.24:0,72,1007	0/0:21,0:21:63.21:0,63,881	0/0:22,0:22:63.21:0,63,879	0/0:17,0:17:51.17:0,51,713	0/0:21,0:21:63.20:0,63,864	0/0:38,0:38:99:0,111,1533	0/0:41,0:41:99:0,120,1677	0/0:23,0:23:69.23:0,69,963	0/0:39,0:39:99:0,111,1552	0/0:8,0:8:24.08:0,24,336	0/0:21,0:21:63.19:0,63,845	0/0:26,0:26:75.25:0,75,1048	0/0:36,0:36:99:0,105,1467	0/0:18,0:18:54.18:0,54,751	0/0:24,0:24:72.23:0,72,981	0/0:19,0:19:57.19:0,57,794	0/0:22,0:22:66.22:0,66,922	0/0:30,0:30:87.27:0,87,1184	0/0:27,0:27:78.26:0,78,1089	0/0:11,0:11:27.09:0,27,378
chr10	94349269	.	C	CACA	744.97	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.049;DP=668;FS=1.068;HRun=0;HaplotypeScore=98.5529;InbreedingCoeff=0.9842;MQ=89.48;MQ0=0;MQRankSum=-6.070;QD=41.39;ReadPosRankSum=-1.450;VQSLOD=3.9921;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:18:39.07:840,39,0	0/0:5,0:5:15.05:0,15,275	0/0:28,0:28:84.19:0,84,1370	0/0:26,0:26:75.17:0,75,1267	0/0:32,0:32:93.31:0,93,1695	0/0:36,0:36:99:0,99,1815	0/0:17,0:17:51.15:0,51,864	0/0:30,0:30:87.24:0,87,1437	0/0:17,0:17:48.14:0,48,833	0/0:23,0:23:62.02:0,62,1086	0/0:24,0:24:72.18:0,72,1214	0/0:20,0:20:60.18:0,60,1084	0/0:23,0:23:69.24:0,69,1267	0/0:28,0:28:84.27:0,84,1491	0/0:44,0:44:99:0,132,2429	0/0:20,0:20:60.19:0,60,1036	0/0:22,0:22:66.23:0,66,1224	0/0:12,0:12:36.11:0,36,634	0/0:15,0:15:39.13:0,39,713	0/0:19,0:19:57.19:0,57,1019	0/0:38,0:38:99:0,105,1841	0/0:19,0:19:51.17:0,51,943	0/0:34,0:34:93.29:0,93,1677	0/0:20,0:20:60.19:0,60,1080	0/0:24,0:24:69.21:0,69,1223	0/0:20,0:20:54.19:0,54,1007	0/0:31,0:31:93.32:0,93,1726	0/0:23,0:23:69.21:0,69,1225
chr10	94349557	.	AACACAC	A	1850.25	PASS	AB=0.855;AC=35;AF=0.648;AN=54;BaseQRankSum=5.563;DP=426;FS=18.301;HRun=0;HaplotypeScore=93.3345;InbreedingCoeff=0.3887;MQ=73.43;MQ0=4;MQRankSum=-5.017;QD=5.86;ReadPosRankSum=-1.438;VQSLOD=-0.2703;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:26:14.08:173,14,0	0/0:4,0:4:6.87:0,7,52	./.	0/1:30,0:24:0:0,0,0	0/1:9,2:17:47.88:48,0,109	1/1:11,5:17:12.04:224,12,0	1/1:12,5:17:5.97:80,6,0	1/1:24,0:24:8.96:69,9,0	1/1:11,0:12:2.21:21,2,0	0/1:10,0:10:18.98:45,0,19	0/0:6,0:9:5.12:0,5,46	1/1:8,3:12:9.02:147,9,0	1/1:8,3:11:8.98:181,9,0	1/1:12,2:14:3.01:61,3,0	1/1:7,0:8:0.88:2,1,0	0/1:13,3:17:33.51:110,0,34	1/1:19,4:24:12.93:225,13,0	1/1:5,1:7:1.84:59,2,0	0/0:13,0:16:13.40:0,13,209	0/0:14,0:14:14.92:0,15,351	0/0:19,0:18:27.02:0,27,566	1/1:10,7:17:17.82:303,18,0	0/1:8,1:11:50.33:50,0,77	1/1:15,5:19:5.98:81,6,0	1/1:9,0:18:3.62:82,4,0	0/0:14,0:14:21.07:0,21,558	0/0:6,0:8:7.23:0,7,83	1/1:2,2:4:3.01:61,3,0
chr10	94350024	.	GA	G	7685.55	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.472;DP=651;FS=7.085;HRun=3;HaplotypeScore=70.3918;InbreedingCoeff=0.9996;MQ=79.61;MQ0=0;MQRankSum=-2.669;QD=31.24;ReadPosRankSum=2.875;VQSLOD=4.8125;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:99:1263,102,0	0/0:9,0:9:27.08:0,27,370	0/0:15,0:15:35.91:0,36,502	0/0:17,0:17:28.74:0,29,429	0/0:27,0:27:78.25:0,78,1101	1/1:0,21:21:54.17:669,54,0	1/1:0,23:23:66.21:817,66,0	0/0:38,0:38:99:0,111,1508	0/0:26,0:26:78.26:0,78,1122	0/0:30,0:30:83.94:0,84,1148	0/0:18,0:18:54.17:0,54,751	1/1:2,22:24:63.20:780,63,0	1/1:1,26:27:66.21:815,66,0	1/1:0,22:22:63.20:780,63,0	0/0:30,0:30:87.24:0,87,1178	0/0:23,0:23:69.22:0,69,975	1/1:1,31:32:72.23:892,72,0	0/0:22,0:22:66.19:0,66,912	0/0:16,0:16:48.14:0,48,657	0/0:29,0:29:87.27:0,87,1212	0/0:24,0:24:69.22:0,69,974	1/1:3,19:22:42.13:519,42,0	1/1:1,27:28:62.73:779,63,0	1/1:0,13:13:30.09:372,30,0	0/0:14,0:14:39.13:0,39,561	0/0:28,0:28:81.27:0,81,1162	0/0:28,0:28:84.24:0,84,1152	0/0:11,0:11:33.11:0,33,474
chr10	94351296	.	G	GTTGGT	11697.45	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=4.542;DP=708;FS=0.359;HRun=0;HaplotypeScore=136.4364;InbreedingCoeff=0.9963;MQ=76.15;MQ0=2;MQRankSum=-14.172;QD=49.36;ReadPosRankSum=1.446;VQSLOD=5.2290;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,11:14:18.06:527,18,0	0/0:7,0:7:18.06:0,18,349	0/0:31,0:27:26.10:0,26,512	0/0:39,0:33:54.31:0,54,864	0/0:29,0:29:72.25:0,72,1386	1/1:4,23:27:54.19:1584,54,0	1/1:8,13:23:21.07:567,21,0	0/0:28,0:28:66.21:0,66,1193	0/0:23,0:23:60.19:0,60,1130	0/0:32,0:32:72.24:0,72,1346	0/0:19,0:19:45.15:0,45,862	1/1:6,21:28:54.19:1576,54,0	1/1:6,25:32:54.19:1550,54,0	1/1:7,22:30:60.21:1740,60,0	0/0:26,0:26:63.18:0,63,1184	0/0:30,0:30:72.25:0,72,1383	1/1:5,12:17:35.11:906,35,0	0/0:28,0:28:33.14:0,33,1015	0/0:18,0:18:32.76:0,33,550	0/0:31,0:31:75.24:0,75,1403	0/0:27,0:27:75.23:0,75,1383	1/1:3,21:24:48.16:1406,48,0	1/1:1,13:17:30.10:873,30,0	1/1:9,16:25:33.11:968,33,0	0/0:22,0:22:63.22:0,63,1209	0/0:34,0:34:90.30:0,90,1694	0/0:39,0:38:99:0,99,1733	0/0:8,0:8:24.08:0,24,451
chr10	94351540	.	A	AT	6367.03	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-7.365;DP=744;FS=0.000;HRun=7;HaplotypeScore=74.9284;InbreedingCoeff=0.9964;MQ=86.21;MQ0=0;MQRankSum=-1.297;QD=29.75;ReadPosRankSum=1.292;VQSLOD=5.1415;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.09:0,96,913	0/0:5,0:5:15.02:0,15,145	0/0:23,0:23:48.07:0,48,458	0/0:27,0:27:47.58:0,48,454	0/0:33,0:33:96.13:0,96,916	1/1:3,29:32:87.27:1051,87,0	1/1:1,21:22:57.17:689,57,0	0/0:36,0:36:99:0,99,950	0/0:27,0:27:72.09:0,72,684	0/0:22,0:22:60.08:0,60,572	0/0:25,0:25:63.08:0,63,602	1/1:2,28:30:81.25:979,81,0	1/1:5,27:32:69.21:834,69,0	1/1:3,21:24:63.15:745,63,0	0/0:37,0:37:99:0,102,976	0/0:23,0:23:69.11:0,69,666	1/1:2,17:19:48.15:580,48,0	0/0:20,0:20:45.01:0,45,425	0/0:21,0:21:57.08:0,57,546	0/0:34,0:34:96.03:0,96,900	0/0:35,0:35:93.13:0,93,892	1/1:4,16:20:22.34:512,22,0	1/1:3,23:26:60.18:725,60,0	1/1:2,7:9:21.06:254,21,0	0/0:33,0:33:96.15:0,96,927	0/0:32,0:32:81.12:0,81,782	0/0:41,0:41:99:0,114,1094	0/0:24,0:24:54.08:0,54,521
chr10	94352080	.	TAGGGTGAGCAGATATCCCTA	T	15139.88	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.744;DP=616;FS=43.917;HRun=0;HaplotypeScore=328.3595;InbreedingCoeff=0.9916;MQ=88.85;MQ0=0;MQRankSum=-14.943;QD=100.26;ReadPosRankSum=3.991;VQSLOD=3.0917;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,9174	0/0:12,0:12:36.12:0,36,3403	0/0:28,0:29:75.26:0,75,4131	0/0:23,0:23:66.09:0,66,3894	0/0:33,0:33:90.31:0,90,8060	1/1:6,8:14:24.08:1359,24,0	1/1:2,12:14:27.09:1529,27,0	0/0:23,0:23:69.24:0,69,5556	0/0:18,0:18:54.18:0,54,4708	0/0:27,0:27:75.26:0,75,6647	0/0:24,0:24:72.20:0,72,5957	1/1:3,12:15:24.08:1359,24,0	1/1:0,17:17:39.13:2209,39,0	1/1:5,19:24:57.20:3228,57,0	0/0:35,0:35:99:0,102,8386	0/0:18,0:18:54.19:0,54,4603	1/1:5,8:13:15.05:809,15,0	0/0:14,0:14:33.11:0,33,2402	0/0:22,0:22:66.23:0,66,5003	0/0:28,0:28:84.28:0,84,7243	0/0:29,0:29:84.29:0,84,7176	1/1:6,17:23:45.15:2549,45,0	1/1:6,12:18:27.09:1442,27,0	1/1:6,7:13:12.04:656,12,0	0/0:27,0:27:78.27:0,78,6922	0/0:22,0:22:66.23:0,66,6175	0/0:31,0:31:93.32:0,93,7695	0/0:15,0:15:39.09:0,39,2860
chr10	94352287	.	T	TAC	4335.17	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=16.886;DP=627;FS=17.819;HRun=0;HaplotypeScore=131.4088;InbreedingCoeff=0.9971;MQ=93.35;MQ0=0;MQRankSum=-16.236;QD=27.97;ReadPosRankSum=1.661;VQSLOD=5.3939;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.26:0,78,1190	0/0:6,0:6:18.05:0,18,255	0/0:31,0:31:84.22:0,84,1185	0/0:29,0:29:87.15:0,87,1170	0/0:31,0:31:90.29:0,90,1352	1/1:3,8:11:21.07:264,21,0	1/1:4,15:19:45.13:544,45,0	0/0:30,0:30:90.27:0,90,1301	0/0:19,0:19:57.18:0,57,851	0/0:24,0:24:72.22:0,72,1048	0/0:24,0:24:72.24:0,72,1098	1/1:3,12:15:39.12:485,39,0	1/1:4,14:18:45.13:544,45,0	1/1:1,10:11:30.09:373,30,0	0/0:29,0:29:75.24:0,75,1124	0/0:30,0:30:87.28:0,87,1309	1/1:5,8:13:21.74:295,22,0	0/0:12,0:12:27.09:0,27,413	0/0:25,0:25:72.24:0,72,1101	0/0:35,0:35:99:0,105,1564	0/0:20,0:20:57.18:0,57,850	1/1:4,29:33:86.88:987,87,0	1/1:6,15:21:45.05:529,45,0	1/1:5,9:14:27.06:314,27,0	0/0:23,0:23:69.23:0,69,1055	0/0:19,0:19:54.16:0,54,769	0/0:32,0:32:81.25:0,81,1194	0/0:26,0:26:72.24:0,72,1102
chr10	94352289	.	T	TCCC	6767.19	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=16.431;DP=643;FS=12.443;HRun=0;HaplotypeScore=144.1628;InbreedingCoeff=0.9554;MQ=92.25;MQ0=0;MQRankSum=-16.870;QD=38.89;ReadPosRankSum=1.219;VQSLOD=5.7216;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.27:0,78,1454	0/0:5,0:5:15.05:0,15,280	0/0:30,0:30:87.30:0,87,1583	0/0:30,0:30:87.30:0,87,1611	0/0:30,0:30:87.30:0,87,1622	1/1:6,8:14:25.07:479,25,0	1/1:8,15:23:53.25:942,53,0	0/0:29,0:29:87.30:0,87,1617	0/0:19,0:19:57.20:0,57,1054	0/0:26,0:26:72.24:0,72,1314	0/0:25,0:25:72.25:0,72,1342	1/1:6,11:18:45.13:763,45,0	1/1:6,14:20:38.25:821,38,0	1/1:3,10:13:34.44:610,34,0	0/0:27,0:27:78.27:0,78,1439	0/0:30,0:30:90.28:0,90,1616	1/1:6,8:14:27.09:484,27,0	0/0:12,0:12:30.10:0,30,547	0/0:25,0:25:75.24:0,75,1367	0/0:35,0:35:99:0,105,1950	0/0:20,0:20:60.18:0,60,1086	1/1:6,29:35:82.78:1448,83,0	1/1:6,15:21:43.67:771,44,0	1/1:7,9:16:0:448,0,0	0/0:23,0:23:69.24:0,69,1287	0/0:18,0:18:54.16:0,54,940	0/0:30,0:30:90.29:0,90,1621	0/0:26,0:26:78.27:0,78,1437
chr10	94352688	.	G	GT	8082.50	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.639;DP=581;FS=3.260;HRun=3;HaplotypeScore=68.9282;InbreedingCoeff=0.9926;MQ=82.90;MQ0=0;MQRankSum=-3.393;QD=37.59;ReadPosRankSum=1.893;VQSLOD=5.5218;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:87.25:1196,87,0	0/0:5,0:5:15.03:0,15,167	0/0:24,0:24:53.75:0,54,613	0/0:11,0:10:26.90:0,27,289	0/0:29,0:29:75.21:0,75,888	1/1:0,25:25:69.23:966,69,0	1/1:2,9:11:27.09:378,27,0	0/0:28,0:28:72.20:0,72,843	0/0:17,0:17:48.15:0,48,576	0/0:26,0:26:78.24:0,78,936	0/0:27,0:27:78.23:0,78,924	1/1:0,27:27:78.26:1092,78,0	1/1:1,26:27:75.05:1048,75,0	1/1:3,15:18:42.14:588,42,0	0/0:18,0:18:54.17:0,54,648	0/0:14,0:14:42.13:0,42,504	1/1:1,19:20:48.16:672,48,0	0/0:15,0:15:36.06:0,36,405	0/0:21,0:21:57.17:0,57,684	0/0:35,0:35:99:0,105,1259	0/0:16,0:16:48.12:0,48,553	1/1:1,21:22:57.19:798,57,0	1/1:2,23:25:66.22:924,66,0	1/1:0,10:10:30.10:420,30,0	0/0:20,0:20:60.18:0,60,720	0/0:25,0:25:75.23:0,75,900	0/0:30,0:29:84.26:0,84,1007	0/0:5,0:5:12.04:0,12,144
chr10	94353062	.	C	CAAT	3788.36	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=9.787;DP=352;FS=14.346;HRun=0;HaplotypeScore=53.1368;InbreedingCoeff=0.8793;MQ=64.90;MQ0=0;MQRankSum=0.532;QD=38.66;ReadPosRankSum=0.798;VQSLOD=3.4997;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,5:16:24.08:431,24,0	0/0:7,0:7:21.05:0,21,288	0/0:9,0:8:3.20:0,3,72	0/0:3,0:3:3.01:0,3,42	0/0:20,0:20:57.19:0,57,830	1/1:9,13:22:48.15:928,48,0	1/1:2,1:3:3.01:62,3,0	0/0:40,0:40:93.28:0,93,1296	0/0:12,0:12:27.09:0,27,383	0/0:13,0:13:30.06:0,30,416	0/0:10,0:10:21.05:0,21,288	1/1:6,3:9:21.07:408,21,0	1/1:7,1:8:12.03:181,12,0	1/1:4,4:8:15.05:291,15,0	0/0:9,0:9:21.05:0,21,284	0/0:13,0:13:33.11:0,33,482	1/1:5,9:14:39.11:757,39,0	0/0:11,0:11:30.10:0,30,424	0/0:13,0:13:33.11:0,33,481	0/0:10,0:10:24.08:0,24,350	0/0:5,0:5:15.03:0,15,201	1/1:3,2:5:12.04:224,12,0	1/1:7,4:11:29.97:445,30,0	1/1:1,1:2:3.01:62,3,0	0/0:17,0:17:42.14:0,42,617	0/0:25,0:25:69.19:0,69,948	0/0:27,0:27:66.20:0,66,935	0/0:10,0:10:30.10:0,30,432
chr10	94353078	.	GA	G	2158.88	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=12.439;DP=370;FS=6.444;HRun=6;HaplotypeScore=44.2578;InbreedingCoeff=0.9266;MQ=68.25;MQ0=0;MQRankSum=-0.973;QD=21.59;ReadPosRankSum=3.008;VQSLOD=2.5865;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,12:13:33.07:347,33,0	0/0:7,0:7:21.07:0,21,276	0/0:8,0:7:15:0,15,196	0/0:4,0:4:12.04:0,12,155	0/0:22,0:22:66.20:0,66,852	1/1:4,16:20:42.81:464,43,0	1/1:0,1:1:3.01:32,3,0	0/0:39,0:39:99:0,108,1407	0/0:12,0:12:33.11:0,33,434	0/0:11,0:11:33.11:0,33,434	0/0:9,0:9:21.07:0,21,276	1/1:2,7:9:15.04:160,15,0	1/1:0,5:5:15.04:161,15,0	1/1:0,10:10:21.05:218,21,0	0/0:12,0:12:36.12:0,36,474	0/0:15,0:15:45.15:0,45,592	1/1:2,16:18:36.07:377,36,0	0/0:12,0:12:24.08:0,24,315	0/0:17,0:17:48.15:0,48,624	0/0:13,0:13:39.13:0,39,513	0/0:8,0:8:21.06:0,21,263	1/1:1,4:5:12.03:128,12,0	1/1:0,14:14:42.11:449,42,0	1/1:1,4:5:2.73:32,3,0	0/0:16,0:16:42.14:0,42,552	0/0:27,0:27:72.22:0,72,930	0/0:26,0:26:66.21:0,66,856	0/0:12,0:12:33.11:0,33,434
chr10	94355562	.	C	CA	797.30	PASS	AB=0.925;AC=25;AF=0.446;AN=56;BaseQRankSum=7.306;DP=345;FS=3.982;HRun=5;HaplotypeScore=74.2623;InbreedingCoeff=0.4248;MQ=44.46;MQ0=18;MQRankSum=-6.819;QD=4.31;ReadPosRankSum=0.193;VQSLOD=-0.5401;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:11:11,0,17	0/0:2,0:2:3.06:0,3,8	0/0:10,0:5:12.03:0,12,127	0/0:11,0:2:5.91:0,6,48	1/1:13,0:11:0.01:1,0,0	1/1:9,1:8:8.59:53,9,0	1/1:2,2:4:5.93:51,6,0	0/0:16,0:15:39.09:0,39,411	0/0:7,0:6:3.37:0,3,10	0/0:9,0:6:1.79:0,2,5	0/1:15,0:14:3.31:13,0,3	1/1:8,2:8:13.32:106,13,0	1/1:9,3:11:5.81:48,6,0	1/1:8,1:10:14.52:110,15,0	0/1:14,0:13:0.40:0,0,1	0/0:9,0:8:0.23:0,0,2	1/1:13,5:22:16.84:232,17,0	0/1:11,0:8:3.25:8,0,3	0/0:19,0:19:26.04:0,26,395	0/0:34,0:34:78.14:0,78,821	0/0:10,0:8:9.97:0,10,211	0/1:9,4:10:6.44:97,0,6	1/1:5,3:6:9.64:104,10,0	0/1:7,1:8:8.02:57,0,8	1/1:10,0:8:11.69:57,12,0	0/0:20,0:18:29.07:0,29,435	0/0:13,0:12:21.05:0,21,226	0/1:5,0:4:23.06:23,0,23
chr10	94355567	.	AC	A	2253.39	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=9.847;DP=345;FS=18.256;HRun=1;HaplotypeScore=80.6575;InbreedingCoeff=0.8648;MQ=44.09;MQ0=10;MQRankSum=-11.342;QD=10.89;ReadPosRankSum=-3.969;VQSLOD=-0.3057;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,10:15:12.14:198,12,0	1/1:1,2:3:8.98:84,9,0	0/0:10,0:5:11.98:0,12,138	0/0:12,0:3:6:0,6,61	1/1:12,2:12:32.88:199,33,0	1/1:4,6:8:17.46:117,17,0	1/1:4,2:6:11.24:63,11,0	0/0:17,0:16:47.95:0,48,544	1/1:5,2:7:14.91:114,15,0	1/1:3,2:2:5.96:43,6,0	1/1:9,4:12:29.18:185,29,0	1/1:9,3:12:27.14:173,27,0	1/1:9,1:9:20.86:132,21,0	1/1:6,5:11:29.35:219,29,0	1/1:12,1:12:21.25:128,21,0	1/1:7,2:8:17.85:129,18,0	1/1:19,6:24:4.11:175,4,0	1/1:6,4:6:3.29:74,3,0	0/0:20,0:20:50.76:0,51,591	0/0:33,0:33:84.58:0,85,1072	0/0:10,0:9:26.21:0,26,287	1/1:11,3:11:19.59:158,20,0	1/1:5,4:7:17.66:139,18,0	1/1:7,2:9:5.46:27,5,0	1/1:10,0:10:16.31:106,16,0	0/0:18,0:18:53.88:0,54,646	0/0:12,0:11:24.07:0,24,311	0/0:6,0:5:14.17:0,14,107
chr10	94355571	.	AAAAAC	A	957.61	PASS	AB=0.875;AC=16;AF=0.286;AN=56;BaseQRankSum=5.899;DP=356;FS=0.567;HRun=0;HaplotypeScore=109.5383;InbreedingCoeff=-0.2770;MQ=44.11;MQ0=9;MQRankSum=-7.651;QD=5.57;ReadPosRankSum=1.900;VQSLOD=1.7740;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:17:97.31:230,0,97	0/0:3,0:3:5.81:0,6,35	0/0:11,0:6:14.17:0,14,249	0/0:14,0:4:4.80:0,5,30	0/1:15,0:13:12.44:20,0,12	0/1:5,6:9:9.22:91,0,9	0/1:5,1:6:5.47:13,0,5	0/0:21,0:20:51.16:0,51,1146	0/1:9,0:9:12.69:16,0,13	1/1:5,0:2:0.47:1,0,0	0/0:13,0:12:3.51:0,4,45	0/1:9,2:11:59.57:82,0,60	0/1:9,1:9:38.45:38,0,51	0/1:6,4:10:41.12:142,0,41	0/0:11,0:10:3.91:0,4,23	0/1:11,0:10:8.35:8,0,25	0/1:18,6:23:99:198,0,151	0/0:10,0:6:7.61:0,8,78	0/0:22,0:22:66.22:0,66,1355	0/0:31,0:31:81.18:0,81,2113	0/0:10,0:9:24.07:0,24,578	0/1:11,3:12:19.49:104,0,19	0/1:7,3:8:14.02:108,0,14	0/1:7,1:8:28.95:29,0,86	0/1:9,0:9:25.87:26,0,56	0/0:21,0:21:60.19:0,60,1515	0/0:11,0:10:24.08:0,24,688	0/0:6,0:5:15.05:0,15,321
chr10	94355572	.	AAAAC	A	1075.27	PASS	AB=0.979;AC=21;AF=0.375;AN=56;BaseQRankSum=6.560;DP=356;FS=0.000;HRun=0;HaplotypeScore=103.0068;InbreedingCoeff=-0.1955;MQ=44.20;MQ0=10;MQRankSum=-8.073;QD=5.17;ReadPosRankSum=1.758;VQSLOD=1.4431;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,2:17:99:336,0,106	0/1:3,0:3:5.56:6,0,30	0/0:12,0:6:12.98:0,13,231	0/0:14,0:4:5.98:0,6,46	0/1:14,0:12:2.97:61,0,3	1/1:11,0:9:2.69:79,3,0	0/1:5,1:6:0.16:0,0,16	0/0:21,0:20:51.16:0,51,1075	1/1:9,0:9:1.83:52,2,0	0/1:5,0:2:0.13:0,0,0	0/1:13,0:12:4.38:4,0,29	0/1:11,0:11:54.28:66,0,54	0/1:10,0:9:31.02:31,0,44	0/1:10,0:10:24.07:123,0,24	0/1:11,0:10:4.11:30,0,4	0/1:11,0:10:15.22:39,0,15	0/1:24,0:23:99:153,0,176	0/1:10,0:6:17.33:17,0,64	0/0:23,0:23:69.18:0,69,1291	0/0:30,0:30:82.07:0,82,1863	0/0:10,0:9:24.08:0,24,527	0/1:14,0:12:26.25:81,0,26	0/1:10,0:8:8.97:101,0,9	0/1:7,1:8:6.81:7,0,78	0/1:9,0:9:40.69:41,0,59	0/0:20,0:20:60.19:0,60,1351	0/0:11,0:10:24.08:0,24,595	0/0:7,0:6:18.04:0,18,318
chr10	94355573	.	AAAC	A	1314.70	PASS	AB=0.978;AC=26;AF=0.464;AN=56;BaseQRankSum=7.770;DP=355;FS=3.826;HRun=0;HaplotypeScore=96.3658;InbreedingCoeff=0.0504;MQ=44.21;MQ0=11;MQRankSum=-9.491;QD=6.38;ReadPosRankSum=0.742;VQSLOD=2.4461;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,7:17:88.87:229,0,89	0/1:3,0:3:2.52:38,0,3	0/0:12,0:6:13.76:0,14,217	0/0:15,0:4:5.89:0,6,38	1/1:14,0:12:2.53:91,3,0	1/1:10,0:8:2.34:93,2,0	1/1:6,0:6:7.67:26,8,0	0/0:20,0:19:51.16:0,51,940	1/1:9,0:9:4.30:121,4,0	1/1:5,0:2:3.35:15,3,0	0/1:13,0:12:12.26:70,0,12	0/1:11,0:11:24.92:59,0,25	0/1:10,0:9:21.98:26,0,22	0/1:10,0:10:20.35:103,0,20	1/1:11,0:10:14.07:75,14,0	1/1:11,0:10:6.93:86,7,0	0/1:24,0:23:99:134,0,145	0/1:10,0:6:44.04:44,0,52	0/0:24,0:24:70.01:0,70,1169	0/0:30,0:30:82.07:0,82,1571	0/0:10,0:9:24.07:0,24,462	0/1:13,0:11:21.53:98,0,22	0/1:10,0:8:10.24:96,0,10	0/1:8,0:8:4.19:4,0,78	0/1:9,0:9:64.06:80,0,64	0/0:20,0:20:60.18:0,60,1136	0/0:11,0:10:24.08:0,24,493	0/0:7,0:6:18.04:0,18,297
chr10	94355575	.	AC	A	1474.57	PASS	AB=0.934;AC=30;AF=0.536;AN=56;BaseQRankSum=9.774;DP=359;FS=16.374;HRun=1;HaplotypeScore=89.0811;InbreedingCoeff=0.3860;MQ=45.14;MQ0=10;MQRankSum=-10.064;QD=6.99;ReadPosRankSum=-1.295;VQSLOD=-0.7389;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,1:17:39.42:180,0,39	0/1:2,1:3:1.13:55,0,1	0/0:13,0:6:12.27:0,12,151	0/0:17,0:4:5.40:0,5,26	1/1:12,1:11:20.79:154,21,0	1/1:10,0:8:1.34:55,1,0	1/1:6,0:6:6.84:50,7,0	0/0:19,0:18:54.06:0,54,621	1/1:8,1:9:8.91:102,9,0	1/1:4,2:3:6.44:45,6,0	1/1:10,3:12:7.89:109,8,0	1/1:12,1:13:18.80:120,19,0	1/1:10,0:9:18.92:105,19,0	1/1:11,0:11:11.53:117,12,0	1/1:11,1:11:14.10:79,14,0	1/1:9,2:10:18.66:101,19,0	0/1:22,0:22:99:104,0,120	0/1:7,3:6:25.39:63,0,25	0/0:24,0:24:69.90:0,70,798	0/0:28,0:28:81.17:0,81,1005	0/0:11,0:10:27.06:0,27,333	0/1:14,0:12:49.01:54,0,49	0/1:12,0:10:1.04:74,0,1	0/1:8,0:8:12.64:13,0,43	0/1:9,0:9:48.95:88,0,49	0/0:20,0:20:60.16:0,60,736	0/0:10,0:9:24.08:0,24,306	0/0:6,0:6:18.04:0,18,217
chr10	94355581	.	AAC	A	1491.20	PASS	AB=0.977;AC=27;AF=0.482;AN=56;BaseQRankSum=10.839;DP=412;FS=4.077;HRun=0;HaplotypeScore=105.8375;InbreedingCoeff=0.3806;MQ=46.53;MQ0=8;MQRankSum=-10.068;QD=6.78;ReadPosRankSum=-2.841;VQSLOD=2.3109;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,1:19:13.23:0,13,191	1/1:3,0:3:7.82:44,8,0	0/0:20,0:11:23.59:0,24,266	0/0:23,0:7:7.60:0,8,60	1/1:19,0:17:38.59:235,39,0	0/1:12,0:10:4.21:83,0,4	0/1:7,0:7:0.83:33,0,1	0/0:21,0:20:57.14:0,57,911	1/1:9,0:9:16.59:126,17,0	1/1:8,0:5:14.18:103,14,0	1/1:14,1:15:27.15:171,27,0	1/1:15,0:15:8.37:50,8,0	1/1:10,2:11:14.01:99,14,0	0/1:11,1:12:16.36:84,0,16	1/1:13,1:13:26.10:141,26,0	1/1:10,0:9:19.94:107,20,0	0/1:21,1:22:58.14:58,0,121	0/1:10,0:6:38.47:65,0,38	0/0:25,0:25:50.10:0,50,1000	0/0:28,0:28:84.16:0,84,1307	0/0:14,0:13:36.05:0,36,529	0/1:19,0:17:13.92:108,0,14	0/1:13,0:11:10.17:52,0,10	0/1:9,1:10:30.71:31,0,64	0/1:10,0:9:14.13:100,0,14	0/0:21,0:21:60.20:0,60,990	0/0:10,0:9:24.08:0,24,405	0/0:8,0:8:23.93:0,24,290
chr10	94355582	.	AC	A	1812.43	PASS	AB=0.936;AC=31;AF=0.554;AN=56;BaseQRankSum=10.947;DP=408;FS=14.785;HRun=1;HaplotypeScore=97.8840;InbreedingCoeff=0.5795;MQ=46.65;MQ0=8;MQRankSum=-10.356;QD=8.28;ReadPosRankSum=-3.164;VQSLOD=-0.7430;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:15.01:0,15,188	1/1:3,0:3:5.82:60,6,0	0/0:21,0:11:14.06:0,14,178	0/0:23,0:7:8.80:0,9,64	1/1:18,1:17:37.44:244,37,0	1/1:12,0:10:7.35:60,7,0	1/1:7,0:7:6.48:48,6,0	0/0:20,0:19:57.11:0,57,705	1/1:10,0:10:15.69:98,16,0	1/1:6,2:5:14.77:98,15,0	1/1:15,0:15:30.07:188,30,0	1/1:14,0:14:24.66:121,25,0	1/1:12,0:11:24.42:146,24,0	0/1:12,0:12:4.03:108,0,4	1/1:11,2:12:27.08:191,27,0	1/1:8,2:9:23.76:166,24,0	0/1:22,0:22:74.45:93,0,74	0/1:8,2:6:27.08:65,0,27	0/0:24,0:24:43.14:0,43,783	0/0:28,0:28:84.15:0,84,1043	0/0:14,0:13:35.95:0,36,386	1/1:18,0:16:5.57:129,6,0	1/1:12,1:11:8.32:84,8,0	0/1:10,0:10:36.64:46,0,37	0/1:9,2:10:14.59:74,0,15	0/0:21,0:21:60.19:0,60,783	0/0:10,0:9:24.08:0,24,318	0/0:8,0:8:23.93:0,24,246
chr10	94355584	.	AAAAAAC	A	2027.20	PASS	AB=0.966;AC=19;AF=0.339;AN=56;BaseQRankSum=6.629;DP=420;FS=9.383;HRun=0;HaplotypeScore=132.1655;InbreedingCoeff=0.5364;MQ=48.37;MQ0=8;MQRankSum=-6.936;QD=12.59;ReadPosRankSum=-2.696;VQSLOD=1.6463;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:38.88:0,39,426	0/0:7,0:7:8.22:0,8,74	0/0:22,0:12:3.34:0,3,140	0/0:22,0:6:9.75:0,10,57	0/1:20,0:18:19.56:20,0,23	1/1:7,4:9:15.04:227,15,0	1/1:7,0:7:9.01:91,9,0	0/0:20,0:19:45.14:0,45,877	0/0:10,0:10:10.41:0,10,65	0/1:9,0:6:2.79:3,0,31	0/0:15,0:15:3.84:0,4,52	1/1:14,0:14:23.16:181,23,0	1/1:11,1:11:21.10:249,21,0	1/1:9,2:11:23.60:310,24,0	0/1:13,0:12:7.58:8,0,16	0/0:12,0:11:1.93:0,2,46	0/1:21,2:23:73.41:318,0,73	0/0:10,0:6:11.60:0,12,102	0/0:25,0:24:47.64:0,48,1143	0/0:28,0:28:69.23:0,69,1795	0/0:14,0:13:30.09:0,30,622	1/1:15,3:16:33.55:391,34,0	1/1:11,2:11:17.95:248,18,0	0/1:9,1:10:0.75:170,0,1	0/0:11,0:10:0.33:0,0,18	0/0:22,0:22:57.18:0,57,1567	0/0:11,0:10:27.09:0,27,758	0/0:10,0:10:24.07:0,24,489
chr10	94355590	.	C	CA	1877.61	PASS	AB=0.960;AC=26;AF=0.464;AN=56;BaseQRankSum=9.077;DP=421;FS=13.400;HRun=6;HaplotypeScore=100.1086;InbreedingCoeff=0.5199;MQ=49.51;MQ0=7;MQRankSum=-7.566;QD=8.65;ReadPosRankSum=0.180;VQSLOD=0.4183;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:41.84:0,42,435	0/0:7,0:7:8.19:0,8,76	0/1:23,0:12:2.41:2,0,115	0/0:21,0:8:9.09:0,9,56	0/1:19,0:17:21.55:42,0,22	1/1:7,4:9:14.78:161,15,0	1/1:2,5:7:9.03:109,9,0	0/0:21,0:19:54.14:0,54,580	0/0:9,0:9:0.33:0,0,57	0/1:8,0:6:3.36:3,0,16	0/1:13,0:13:0.21:22,0,0	1/1:3,11:15:14.45:211,14,0	1/1:3,7:9:24.05:273,24,0	1/1:4,5:9:23:220,23,0	1/1:12,0:11:1.76:25,2,0	0/1:13,0:12:14.46:49,0,14	0/1:12,7:22:33.81:198,0,34	0/0:11,0:7:6.31:0,6,92	0/0:25,0:24:60.11:0,60,630	0/0:28,0:28:78.20:0,78,838	0/0:13,0:12:36.07:0,36,378	1/1:6,10:16:29.93:355,30,0	1/1:5,8:11:10.54:161,11,0	1/1:3,7:10:20.27:213,20,0	1/1:13,0:12:3.48:25,3,0	0/0:22,0:22:63.16:0,63,676	0/0:14,0:14:36.09:0,36,383	0/0:8,0:8:24.06:0,24,258
chr10	94355605	.	AAC	A	2319.56	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=8.113;DP=430;FS=7.103;HRun=0;HaplotypeScore=104.7187;InbreedingCoeff=0.7786;MQ=64.18;MQ0=5;MQRankSum=-6.408;QD=15.16;ReadPosRankSum=-0.296;VQSLOD=2.9416;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:0.08:0,0,107	1/1:3,3:6:17.83:193,18,0	0/0:29,0:18:3.91:0,4,264	0/0:24,0:12:15.15:0,15,256	1/1:2,14:14:27.09:389,27,0	0/0:12,0:11:21.37:0,21,267	0/0:10,0:10:21.02:0,21,304	0/0:19,0:17:48.14:0,48,743	1/1:2,7:9:12.04:178,12,0	1/1:4,6:9:23.54:276,24,0	1/1:1,9:10:27.02:343,27,0	0/0:14,0:14:24.05:0,24,331	0/0:12,0:12:31.27:0,31,378	0/0:14,0:14:16.60:0,17,426	1/1:2,8:10:23.95:313,24,0	1/1:2,8:10:26.26:323,26,0	0/1:19,0:19:9.88:10,0,258	1/1:7,2:8:11.99:132,12,0	0/0:25,0:24:69.54:0,70,1011	0/0:22,0:22:66.18:0,66,1036	0/0:16,0:16:45.15:0,45,763	0/0:14,0:13:35.18:0,35,412	0/0:14,0:12:26.76:0,27,323	0/1:11,0:11:13.42:13,0,208	1/1:0,23:22:27.08:357,27,0	0/0:24,0:24:72.23:0,72,1194	0/0:14,0:14:42.14:0,42,708	0/0:14,0:14:42.13:0,42,668
chr10	94355726	.	TC	T	1677.75	PASS	AB=0.794;AC=18;AF=0.321;AN=56;BaseQRankSum=1.625;DP=329;FS=14.381;HRun=10;HaplotypeScore=48.8825;InbreedingCoeff=0.6781;MQ=80.51;MQ0=0;MQRankSum=-2.953;QD=13.42;ReadPosRankSum=4.759;VQSLOD=1.7328;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:11:6.31:0,6,39	1/1:3,6:9:14.97:129,15,0	0/0:11,0:13:8.64:0,9,209	0/1:13,0:14:14.15:14,0,132	1/1:4,4:8:11.98:104,12,0	0/0:7,0:6:11.74:0,12,75	0/0:3,0:11:2.88:0,3,15	0/0:14,0:16:10.58:0,11,103	1/1:3,5:8:14.97:130,15,0	1/1:1,11:12:32.98:283,33,0	1/1:3,8:11:20.78:169,21,0	0/0:7,0:8:17.73:0,18,124	0/0:7,0:8:14.22:0,14,90	0/0:2,0:10:2.97:0,3,20	1/1:6,12:18:26.93:234,27,0	0/1:3,7:10:21.19:66,0,21	0/0:12,0:12:17.10:0,17,113	1/1:4,15:19:44.91:382,45,0	0/0:17,0:17:30.06:0,30,317	0/0:8,1:9:15.03:0,15,157	0/0:28,1:29:37.08:0,37,614	0/0:8,0:8:14.84:0,15,108	0/0:4,0:4:2.83:0,3,14	0/0:6,0:14:8.52:0,9,43	1/1:2,14:16:41.99:364,42,0	0/0:14,0:14:24.06:0,24,265	0/0:10,0:10:30.04:0,30,300	0/0:3,0:3:2.99:0,3,23
chr10	94356745	.	TG	T	7599.65	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.468;DP=602;FS=5.648;HRun=1;HaplotypeScore=58.6395;InbreedingCoeff=0.9989;MQ=64.83;MQ0=0;MQRankSum=0.031;QD=40.00;ReadPosRankSum=3.202;VQSLOD=5.5201;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1650	1/1:0,7:7:21.07:294,21,0	0/0:13,0:11:30.09:0,30,448	0/0:15,0:14:36.12:0,36,536	1/1:0,27:27:75.25:1049,75,0	0/0:15,0:15:45.15:0,45,716	0/0:27,0:27:81.25:0,81,1246	0/0:37,0:37:99:0,111,1732	1/1:0,24:24:69.23:965,69,0	1/1:0,32:32:96.29:1306,96,0	1/1:0,24:24:69.23:965,69,0	0/0:22,0:22:66.23:0,66,1053	0/0:20,0:20:60.20:0,60,959	0/0:19,0:19:57.18:0,57,882	1/1:0,24:24:69.23:965,69,0	1/1:0,10:10:30.10:419,30,0	0/0:24,0:24:72.25:0,72,1151	1/1:0,19:19:57.19:797,57,0	0/0:26,0:26:78.27:0,78,1248	0/0:19,0:18:54.16:0,54,815	0/0:30,0:30:90.29:0,90,1415	0/0:13,0:13:39.13:0,39,621	0/0:23,0:23:66.23:0,66,1055	0/0:22,0:22:63.21:0,63,1007	1/1:0,23:23:60.20:839,60,0	0/0:22,0:22:66.22:0,66,1035	0/0:21,0:21:63.21:0,63,1001	0/0:8,0:8:24.08:0,24,384
chr10	94356929	.	C	CT	4626.30	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-10.610;DP=562;FS=0.000;HRun=9;HaplotypeScore=52.0863;InbreedingCoeff=0.9625;MQ=74.33;MQ0=0;MQRankSum=0.003;QD=25.14;ReadPosRankSum=1.268;VQSLOD=5.4372;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,1:35:68.78:0,69,822	1/1:1,7:8:18.04:191,18,0	0/0:11,0:11:13.82:0,14,130	0/0:8,0:9:20.99:0,21,182	1/1:6,26:32:51.99:787,52,0	0/0:20,0:20:50.92:0,51,436	0/0:19,0:19:41.97:0,42,365	0/0:39,0:39:95.94:0,96,831	1/1:2,11:13:30.08:332,30,0	1/1:7,19:26:31.10:561,31,0	1/1:1,16:17:39.06:418,39,0	0/0:13,0:13:29.98:0,30,257	0/0:23,0:23:62.94:0,63,541	0/0:17,0:17:47.97:0,48,413	1/1:0,26:26:72.19:797,72,0	1/1:2,17:19:45.12:498,45,0	0/0:26,0:26:74.98:0,75,651	1/1:9,15:24:51.14:564,51,0	0/0:17,0:17:41.99:0,42,364	0/0:25,1:27:31.82:0,32,490	0/0:13,0:13:35.97:0,36,308	0/0:16,0:16:41.98:0,42,365	0/0:25,0:25:62.98:0,63,547	0/0:13,0:13:29.99:0,30,260	1/1:3,16:19:2.03:479,2,0	0/0:18,0:18:50.99:0,51,443	0/0:23,0:24:56.02:0,56,475	0/0:13,0:13:38.99:0,39,339
chr10	94363135	.	GA	G	15077.22	PASS	AB=0.920;AC=39;AF=0.696;AN=56;BaseQRankSum=16.166;DP=670;FS=1.790;HRun=3;HaplotypeScore=100.1401;InbreedingCoeff=0.9355;MQ=63.89;MQ0=0;MQRankSum=-4.281;QD=31.41;ReadPosRankSum=4.848;VQSLOD=4.6393;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:87.27:1078,87,0	1/1:0,11:11:30.09:372,30,0	0/0:19,0:18:47.73:0,48,631	0/0:31,3:30:46.06:0,46,895	1/1:0,24:24:60.19:742,60,0	1/1:0,19:19:51.11:614,51,0	1/1:0,17:17:48.15:595,48,0	0/0:31,0:31:90.28:0,90,1246	1/1:2,23:25:66.21:818,66,0	1/1:0,17:17:48.14:580,48,0	1/1:1,20:21:60.15:726,60,0	1/1:1,25:26:75.23:926,75,0	1/1:0,18:18:51.16:632,51,0	1/1:2,25:27:72.23:892,72,0	1/1:0,31:31:90.24:1098,90,0	1/1:0,20:20:48.14:595,48,0	1/1:1,24:25:69.22:855,69,0	1/1:0,37:37:96.30:1186,96,0	0/0:24,0:24:69.23:0,69,992	0/0:20,0:20:57.19:0,57,820	0/0:29,0:29:87.28:0,87,1234	1/1:2,22:24:57.14:688,57,0	1/1:0,23:23:63.20:779,63,0	1/1:0,33:33:87.27:1078,87,0	1/1:0,25:25:66.21:818,66,0	0/1:21,2:23:5.18:5,0,818	0/0:22,0:22:60.20:0,60,864	0/0:11,0:11:33.11:0,33,475
chr10	94363376	.	TC	T	8512.71	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=13.672;DP=567;FS=5.131;HRun=9;HaplotypeScore=240.0050;InbreedingCoeff=0.9481;MQ=63.03;MQ0=0;MQRankSum=-11.607;QD=20.08;ReadPosRankSum=3.469;VQSLOD=2.1275;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,25:34:22.41:458,22,0	1/1:1,7:8:18.01:165,18,0	0/0:13,0:14:6.52:0,7,229	0/0:11,1:11:11.95:0,12,104	1/1:3,26:28:45.02:411,45,0	1/1:4,19:23:59.87:538,60,0	1/1:3,16:19:44.78:411,45,0	0/0:24,0:24:48.03:0,48,497	1/1:1,17:18:51.03:466,51,0	1/1:3,15:18:45.02:411,45,0	1/1:0,11:11:30.02:274,30,0	1/1:1,21:22:60.03:548,60,0	1/1:1,25:26:75.04:684,75,0	1/1:6,18:24:49.77:464,50,0	1/1:3,18:21:50.40:421,50,0	1/1:1,25:26:68.84:617,69,0	1/1:2,29:31:81.04:741,81,0	1/1:5,14:19:39.02:357,39,0	0/0:20,0:20:39.09:0,39,430	0/0:9,0:9:18.04:0,18,199	0/0:24,0:24:72.10:0,72,789	1/1:3,21:24:45.02:411,45,0	1/1:2,21:23:39.02:356,39,0	1/1:5,15:20:32.84:288,33,0	1/1:6,22:28:53.99:493,54,0	0/0:16,1:17:5.34:0,5,310	0/0:20,0:20:51.14:0,51,578	0/0:2,0:3:8.84:0,9,73
chr10	94363421	.	CCATTTTTCCTCTTCACCCTCGTGAAGAA	C	29732.10	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=14.566;DP=461;FS=1.881;HRun=0;HaplotypeScore=448.0475;InbreedingCoeff=0.7452;MQ=68.00;MQ0=0;MQRankSum=-14.395;QD=94.39;ReadPosRankSum=8.447;VQSLOD=2.6406;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,8:20:24.08:1664,24,0	1/1:11,0:11:18.06:1268,18,0	0/0:14,0:13:34:0,34,2464	0/0:10,0:10:27.09:0,27,1712	1/1:20,0:19:33.11:2242,33,0	1/1:15,0:15:18.06:1267,18,0	1/1:20,0:20:24.08:1693,24,0	0/0:22,0:22:63.22:0,63,5403	1/1:13,0:13:12.04:845,12,0	0/1:18,0:18:28.82:2678,0,29	1/1:11,0:11:12.04:848,12,0	1/1:14,0:14:27.09:1904,27,0	1/1:18,0:18:16.12:2297,16,0	1/1:13,0:13:15.05:1058,15,0	1/1:12,0:12:18.06:1272,18,0	1/1:15,0:15:21.07:1478,21,0	0/0:29,0:29:78.27:0,78,9487	0/1:18,0:18:80.93:400,0,81	0/0:14,0:14:42.14:0,42,4023	0/0:7,0:7:21.07:0,21,2602	0/0:26,0:26:78.27:0,78,8737	1/1:21,0:21:36.12:2532,36,0	1/1:25,0:25:54.19:3816,54,0	1/1:12,0:12:13.99:1050,14,0	1/1:19,0:19:18.06:1269,18,0	0/1:20,0:20:99:149,0,6664	0/0:20,0:20:57.20:0,57,6524	0/0:4,0:4:12.04:0,12,1210
chr10	94363424	.	TTTTTCCTCTTCACCCTCGTGAAGAACA	T	28750.93	PASS	AB=0.955;AC=37;AF=0.661;AN=56;BaseQRankSum=14.998;DP=309;FS=2.490;HRun=0;HaplotypeScore=293.4769;InbreedingCoeff=0.8819;MQ=79.43;MQ0=0;MQRankSum=-14.996;QD=174.25;ReadPosRankSum=8.949;VQSLOD=3.9302;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:24.08:1357,24,0	1/1:0,6:6:18.06:1242,18,0	0/0:13,0:12:33.55:0,34,2342	0/0:10,0:10:30.10:0,30,1938	1/1:0,13:12:33.11:2162,33,0	1/1:0,6:6:18.06:1236,18,0	1/1:0,8:8:24.08:1655,24,0	0/0:21,0:21:63.22:0,63,5321	1/1:0,4:4:12.04:814,12,0	1/1:0,13:13:39.13:2692,39,0	1/1:0,4:4:12.04:817,12,0	1/1:0,9:9:27.09:1859,27,0	1/1:0,11:11:33.11:2256,33,0	1/1:0,5:5:15.05:1019,15,0	1/1:0,6:6:18.06:1236,18,0	1/1:0,7:7:21.07:1448,21,0	0/0:28,0:28:78.27:0,78,9246	1/1:0,2:2:6.02:415,6,0	0/0:14,0:14:42.13:0,42,3862	0/0:7,0:7:21.07:0,21,2532	0/0:27,0:27:81.28:0,81,8843	1/1:0,12:12:36.12:2456,36,0	1/1:0,18:18:54.19:3700,54,0	1/1:0,6:6:15.05:1002,15,0	1/1:0,6:6:18.06:1240,18,0	0/1:20,1:21:99:144,0,6874	0/0:19,0:19:57.20:0,57,6361	0/0:5,0:5:15.05:0,15,1512
chr10	94363453	.	GA	G	3516.16	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=15.506;DP=371;FS=2.902;HRun=1;HaplotypeScore=230.5133;InbreedingCoeff=0.8923;MQ=77.81;MQ0=0;MQRankSum=-14.006;QD=19.32;ReadPosRankSum=6.621;VQSLOD=3.6088;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:44.09:47,0,44	1/1:0,6:6:18:158,18,0	0/0:16,0:15:41.35:0,41,586	0/0:10,0:10:30.06:0,30,423	1/1:0,13:12:16.24:205,16,0	1/1:0,6:6:17.99:151,18,0	1/1:2,8:10:20.01:224,20,0	0/0:20,0:20:60.20:0,60,958	1/1:0,4:4:11.60:88,12,0	1/1:1,13:14:41.99:370,42,0	1/1:1,4:5:14.96:118,15,0	1/1:2,9:11:29.13:236,29,0	1/1:2,11:13:38.82:317,39,0	1/1:3,5:8:20.19:145,20,0	1/1:1,6:7:20.98:176,21,0	1/1:0,7:7:21:183,21,0	0/0:31,0:31:87.27:0,87,1365	1/1:0,2:2:6:53,6,0	0/0:15,0:15:42.13:0,42,630	0/0:10,0:10:30.10:0,30,480	0/0:31,0:31:93.32:0,93,1482	1/1:0,12:12:35.72:287,36,0	1/1:2,18:20:58.49:474,58,0	1/1:2,6:8:16.42:102,16,0	1/1:1,6:7:21:183,21,0	0/0:28,1:29:60.62:0,61,1294	0/0:19,0:18:57.19:0,57,906	0/0:8,0:8:24.08:0,24,380
chr10	94363663	.	TCCCCA	T	4762.27	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-0.825;DP=453;FS=12.327;HRun=0;HaplotypeScore=157.0764;InbreedingCoeff=0.9729;MQ=67.27;MQ0=1;MQRankSum=-12.198;QD=42.14;ReadPosRankSum=0.261;VQSLOD=4.4392;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:72.23:0,72,1085	0/0:12,0:12:33.10:0,33,497	0/0:13,0:12:23.92:0,24,551	0/0:14,0:13:32.77:0,33,756	0/0:27,0:27:75.25:0,75,1165	1/1:2,13:14:39.09:729,39,0	1/1:6,9:15:21.07:419,21,0	0/0:14,0:14:27.08:0,27,655	0/0:16,0:16:42.11:0,42,623	0/0:26,0:26:69.23:0,69,1042	0/0:13,0:13:36.12:0,36,554	1/1:0,16:16:45.15:899,45,0	1/1:2,13:15:39.13:779,39,0	1/1:1,13:14:39.09:739,39,0	0/0:19,0:19:45.10:0,45,679	0/0:23,0:23:63.21:0,63,1012	0/0:22,0:22:57.20:0,57,1632	0/0:21,0:21:60.20:0,60,961	0/0:4,0:4:6.02:0,6,177	0/0:7,0:7:18.06:0,18,531	0/0:10,0:10:27.08:0,27,683	1/1:4,8:12:18.06:359,18,0	1/1:1,11:12:30.10:599,30,0	1/1:8,6:14:11.88:240,12,0	0/0:20,0:20:57.18:0,57,885	0/0:10,0:10:30.10:0,30,864	0/0:22,0:22:57.15:0,57,1529	0/0:15,0:15:36.03:0,36,976
chr10	94363673	.	AC	A	5439.12	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=12.865;DP=455;FS=3.644;HRun=7;HaplotypeScore=118.7020;InbreedingCoeff=0.6461;MQ=67.12;MQ0=1;MQRankSum=-6.695;QD=16.48;ReadPosRankSum=2.986;VQSLOD=4.2039;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,23:29:57.13:581,57,0	1/1:2,11:13:27.06:275,27,0	0/0:15,0:14:32.82:0,33,361	0/0:14,0:13:22.79:0,23,333	1/1:1,27:28:72.16:731,72,0	0/1:18,0:17:11.20:11,0,81	0/1:13,0:13:0.46:0,0,111	0/0:13,0:13:24.07:0,24,290	1/1:3,14:17:37.32:370,37,0	1/1:2,23:25:72.16:731,72,0	1/1:0,14:14:39.09:398,39,0	0/1:18,0:18:21.42:21,0,46	1/1:14,0:14:16.20:40,16,0	1/1:13,0:13:14.95:37,15,0	1/1:3,16:19:42.09:428,42,0	1/1:1,22:23:60.13:612,60,0	0/0:21,0:21:54.17:0,54,678	1/1:2,23:25:63.10:632,63,0	0/0:3,0:3:6.02:0,6,75	0/0:7,0:7:21.07:0,21,264	0/0:8,0:8:21.01:0,21,245	0/1:12,0:12:2.95:3,0,44	0/1:15,0:15:15.32:15,0,19	0/1:12,0:12:1.67:2,0,41	1/1:1,21:22:54.12:551,54,0	0/0:11,0:11:30.10:0,30,377	0/0:19,0:19:51.15:0,51,628	0/0:14,0:14:36.10:0,36,430
chr10	94363737	.	TC	T	6295.42	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=2.846;DP=525;FS=0.345;HRun=1;HaplotypeScore=102.4994;InbreedingCoeff=0.8324;MQ=70.36;MQ0=0;MQRankSum=-2.999;QD=33.31;ReadPosRankSum=-1.179;VQSLOD=4.2241;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:28.47:0,28,254	0/0:14,0:14:1.01:0,1,116	0/0:13,0:13:29.50:0,30,479	0/0:5,0:5:11.60:0,12,177	0/1:23,0:23:46.91:47,0,163	1/1:1,23:24:72.23:978,72,0	1/1:0,17:17:42.14:586,42,0	0/0:18,0:18:54.17:0,54,787	0/0:14,0:14:30.29:0,30,133	0/0:27,0:27:22.84:0,23,275	0/0:16,0:16:13.42:0,13,185	1/1:0,23:23:57.19:792,57,0	1/1:2,24:26:69.20:927,69,0	1/1:2,16:18:54.16:713,54,0	0/0:22,0:22:27.93:0,28,195	0/0:22,0:22:1.73:0,2,151	0/0:22,0:22:66.19:0,66,966	0/0:40,0:40:41.62:0,42,323	0/0:5,0:5:15.04:0,15,211	0/0:14,0:14:42.10:0,42,577	0/0:6,0:6:18.06:0,18,276	1/1:1,19:20:57.18:766,57,0	1/1:0,22:22:66.22:912,66,0	1/1:0,16:16:42.14:574,42,0	0/0:27,0:27:13.58:0,14,244	0/0:15,0:15:44.80:0,45,597	0/0:17,0:17:51.17:0,51,780	0/0:15,0:15:42.03:0,42,568
chr10	94363816	.	AAT	A	12588.06	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=15.393;DP=556;FS=2.226;HRun=0;HaplotypeScore=93.8774;InbreedingCoeff=0.9471;MQ=61.48;MQ0=0;MQRankSum=0.799;QD=31.24;ReadPosRankSum=2.216;VQSLOD=6.7134;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:26:48.16:649,48,0	1/1:0,17:17:39.09:506,39,0	0/0:2,0:1:2.96:0,3,19	0/0:5,0:4:2.97:0,3,20	1/1:0,20:20:56.92:645,57,0	1/1:3,21:23:69.18:897,69,0	1/1:0,20:20:39.13:527,39,0	0/0:32,0:32:78.24:0,78,1272	1/1:2,20:22:45.15:608,45,0	1/1:2,21:23:60.20:810,60,0	1/1:1,21:22:57.10:727,57,0	1/1:5,10:15:30.10:404,30,0	1/1:10,16:26:66.15:815,66,0	1/1:6,12:18:54.11:665,54,0	1/1:2,29:31:75.25:1014,75,0	1/1:0,19:19:48.16:648,48,0	0/0:24,0:24:63.09:0,63,990	1/1:3,30:33:69.23:932,69,0	0/0:13,0:13:39.04:0,39,560	0/0:17,0:17:48.15:0,48,791	0/0:15,0:15:45.09:0,45,712	1/1:4,10:14:33.11:446,33,0	1/1:7,15:22:60.03:728,60,0	1/1:5,13:18:45.12:577,45,0	1/1:2,31:33:75.10:990,75,0	0/0:17,0:17:48.12:0,48,722	0/0:13,0:13:33.11:0,33,569	0/0:15,0:15:33.11:0,33,567
chr10	94363971	.	G	GTC	6165.55	PASS	AB=0.792;AC=16;AF=0.286;AN=56;BaseQRankSum=-11.241;DP=775;FS=1.613;HRun=0;HaplotypeScore=96.6535;InbreedingCoeff=0.8345;MQ=72.77;MQ0=4;MQRankSum=-0.127;QD=23.44;ReadPosRankSum=1.293;VQSLOD=5.3478;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,108,1284	0/0:5,0:5:12.01:0,12,133	0/0:50,0:33:44.41:0,44,470	0/1:73,0:47:12.05:12,0,449	0/0:23,0:23:48.15:0,48,595	1/1:5,27:32:29.04:996,29,0	0/1:8,19:28:6.80:687,0,7	0/0:26,0:26:18.22:0,18,494	0/0:38,0:38:99:0,102,1264	0/0:29,0:29:78.23:0,78,954	0/0:12,0:12:30.08:0,30,358	1/1:5,17:23:45.15:733,45,0	1/1:3,23:28:29.04:996,29,0	1/1:9,12:21:33.11:534,33,0	0/0:46,0:47:99:0,117,1414	0/0:30,0:30:81.21:0,81,972	0/0:37,0:37:94.21:0,94,1252	0/0:29,0:28:72.23:0,72,892	0/0:18,0:18:42.12:0,42,508	0/0:12,0:12:33.09:0,33,409	0/0:45,0:45:99:0,105,1289	1/1:2,10:13:30.10:490,30,0	1/1:1,12:13:30.10:491,30,0	1/1:7,25:32:75.26:1225,75,0	0/0:22,0:22:43.93:0,44,642	0/0:17,0:17:45.06:0,45,538	0/0:21,0:22:50.99:0,51,609	0/0:4,0:4:12.04:0,12,149
chr10	94366804	.	GA	G	5968.26	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.306;DP=620;FS=4.184;HRun=8;HaplotypeScore=61.0090;InbreedingCoeff=0.9998;MQ=73.19;MQ0=0;MQRankSum=-1.316;QD=25.18;ReadPosRankSum=3.443;VQSLOD=5.7728;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:84.13:811,84,0	0/0:17,0:17:51.16:0,51,614	0/0:15,0:15:39.11:0,39,456	0/0:13,0:13:36.08:0,36,420	0/0:28,0:28:78.24:0,78,942	1/1:2,25:27:72.11:695,72,0	1/1:2,27:29:75.12:724,75,0	0/0:36,0:36:93.28:0,93,1114	0/0:14,0:14:36.11:0,36,435	0/0:28,0:27:78.24:0,78,936	0/0:20,0:20:57.17:0,57,689	1/1:1,23:24:63.10:608,63,0	1/1:3,24:27:72.11:695,72,0	1/1:5,15:20:45.07:434,45,0	0/0:25,0:25:72.19:0,72,845	0/0:25,0:25:72.22:0,72,870	1/1:2,22:24:57.09:550,57,0	0/0:12,0:13:35.98:0,36,413	0/0:15,0:15:42.11:0,42,495	0/0:34,0:34:99:0,99,1196	0/0:17,0:17:51.14:0,51,605	1/1:0,15:15:39.06:377,39,0	1/1:2,22:24:60.09:579,60,0	1/1:0,17:17:51.08:493,51,0	0/0:25,0:25:72.20:0,72,848	0/0:21,0:21:60.18:0,60,725	0/0:24,0:23:69.21:0,69,833	0/0:13,0:13:30.09:0,30,362
chr10	94371780	.	CA	C	816.46	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.982;DP=633;FS=5.252;HRun=2;HaplotypeScore=59.4492;InbreedingCoeff=0.9937;MQ=76.76;MQ0=0;MQRankSum=-0.579;QD=32.66;ReadPosRankSum=1.687;VQSLOD=3.5578;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.21:0,75,1145	0/0:11,0:11:33.11:0,33,528	0/0:16,0:16:45.11:0,45,675	0/0:9,0:9:24.08:0,24,371	0/0:36,0:36:99:0,108,1695	0/0:26,0:25:78.27:0,78,1242	0/0:18,0:18:54.17:0,54,837	0/0:44,0:44:99:0,132,2065	0/0:21,0:21:63.20:0,63,983	0/0:26,0:26:78.26:0,78,1223	0/0:39,0:39:99:0,117,1871	0/0:18,0:18:54.18:0,54,861	0/0:21,0:21:63.21:0,63,998	0/0:16,0:16:48.16:0,48,765	0/0:22,0:22:66.21:0,66,1032	0/0:24,0:24:72.25:0,72,1151	1/1:0,25:25:72.15:911,72,0	0/0:8,0:8:21.07:0,21,335	0/0:19,0:18:57.19:0,57,910	0/0:35,0:35:99:0,105,1654	0/0:21,0:21:63.21:0,63,1007	0/0:19,0:19:57.19:0,57,911	0/0:22,0:22:66.23:0,66,1054	0/0:14,0:14:42.14:0,42,668	0/0:19,0:19:57.18:0,57,882	0/0:25,0:25:75.25:0,75,1177	0/0:38,0:38:99:0,114,1817	0/0:16,0:16:48.16:0,48,767
chr10	94373461	.	C	CGAA	1087.27	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.182;DP=460;FS=7.978;HRun=0;HaplotypeScore=62.8609;InbreedingCoeff=0.9911;MQ=86.44;MQ0=0;MQRankSum=-4.001;QD=63.96;ReadPosRankSum=1.636;VQSLOD=5.2453;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:17:48.16:1182,48,0	0/0:10,0:10:30.10:0,30,559	0/0:17,0:17:48.14:0,48,816	0/0:14,0:14:39.13:0,39,706	0/0:21,0:21:63.22:0,63,1175	0/0:23,0:23:69.24:0,69,1275	0/0:11,0:11:33.11:0,33,615	0/0:26,0:26:75.25:0,75,1363	0/0:12,0:12:36.12:0,36,664	0/0:18,0:18:54.19:0,54,1003	0/0:10,0:10:30.10:0,30,559	0/0:9,0:9:27.09:0,27,497	0/0:20,0:20:60.21:0,60,1106	0/0:15,0:15:45.15:0,45,839	0/0:10,0:10:30.09:0,30,527	0/0:9,0:9:27.09:0,27,503	0/0:22,0:22:66.20:0,66,1198	0/0:17,0:17:33.04:0,33,877	0/0:18,0:18:51.16:0,51,921	0/0:29,0:29:84.27:0,84,1530	0/0:13,0:13:39.13:0,39,727	0/0:7,0:7:21.06:0,21,361	0/0:13,0:13:39.13:0,39,727	0/0:14,0:14:42.14:0,42,783	0/0:27,0:27:81.27:0,81,1481	0/0:32,0:32:96.33:0,96,1790	0/0:15,0:15:45.13:0,45,806	0/0:11,0:11:30.10:0,30,559
chr10	94374630	.	TA	T	344.53	PASS	AB=0.857;AC=3;AF=0.054;AN=56;BaseQRankSum=5.525;DP=339;FS=3.402;HRun=8;HaplotypeScore=33.3902;InbreedingCoeff=0.4846;MQ=69.31;MQ0=0;MQRankSum=-2.229;QD=14.36;ReadPosRankSum=0.560;VQSLOD=2.6088;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:18:45.06:434,45,0	0/0:7,0:7:18.06:0,18,217	0/0:8,0:6:2.75:0,3,44	0/1:5,1:6:13.80:14,0,109	0/0:15,0:15:33.10:0,33,398	0/0:20,0:20:60.16:0,60,702	0/0:5,0:5:12.02:0,12,133	0/0:32,0:32:78.24:0,78,941	0/0:7,0:7:21.06:0,21,254	0/0:14,0:14:36.11:0,36,435	0/0:17,0:17:45.13:0,45,533	0/0:6,0:6:18.05:0,18,216	0/0:12,0:12:33.09:0,33,386	0/0:9,0:9:24.05:0,24,267	0/0:13,0:13:36.09:0,36,414	0/0:6,0:6:18.06:0,18,217	0/0:18,0:18:36.11:0,36,435	0/0:14,0:14:30.09:0,30,361	0/0:16,1:18:19.13:0,19,498	0/0:10,0:10:30.09:0,30,362	0/0:4,0:4:12.04:0,12,144	0/0:2,0:2:6.01:0,6,61	0/0:6,0:6:18.04:0,18,206	0/0:5,0:5:12.04:0,12,145	0/0:12,0:12:11.07:0,11,172	0/0:22,0:22:60.18:0,60,713	0/0:16,0:16:48.13:0,48,569	0/0:16,0:16:33.10:0,33,396
chr10	94376884	.	A	AAGG	25274.49	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-0.368;DP=622;FS=17.566;HRun=0;HaplotypeScore=99.2649;InbreedingCoeff=0.9987;MQ=77.09;MQ0=0;MQRankSum=-7.024;QD=55.79;ReadPosRankSum=1.217;VQSLOD=5.3361;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,23:31:69.24:1516,69,0	1/1:2,15:17:45.15:1008,45,0	0/0:18,0:18:45.15:0,45,749	0/0:17,0:17:48.16:0,48,796	1/1:6,28:35:78.27:1719,78,0	1/1:4,22:26:66.18:1447,66,0	1/1:1,15:16:45.15:1019,45,0	1/1:9,30:39:99:2423,108,0	1/1:4,15:20:48.16:1030,48,0	1/1:4,25:30:84.27:1837,84,0	1/1:3,15:18:39.13:883,39,0	1/1:2,22:24:63.22:1420,63,0	1/1:3,8:11:24.08:516,24,0	1/1:3,21:24:63.22:1416,63,0	1/1:3,21:25:63.22:1418,63,0	1/1:1,12:13:39.13:883,39,0	1/1:5,19:24:59.92:1305,60,0	1/1:0,9:9:21.07:467,21,0	0/0:25,0:25:72.25:0,72,1198	0/0:25,0:25:72.25:0,72,1198	0/0:34,0:34:93.32:0,93,1538	1/1:2,20:22:60.21:1342,60,0	1/1:3,16:19:41.97:922,42,0	1/1:4,21:25:54.16:1216,54,0	1/1:2,13:15:39.13:875,39,0	0/0:28,0:28:81.26:0,81,1320	0/0:22,0:22:66.23:0,66,1098	1/1:0,10:10:27.09:612,27,0
chr10	94377225	.	GA	G	716.09	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.435;DP=642;FS=5.881;HRun=8;HaplotypeScore=67.2500;InbreedingCoeff=0.9951;MQ=76.43;MQ0=0;MQRankSum=-4.077;QD=24.69;ReadPosRankSum=0.105;VQSLOD=4.3457;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:84.14:811,84,0	0/0:14,0:14:36.11:0,36,435	0/0:20,0:20:47.79:0,48,531	0/0:19,0:19:41.22:0,41,427	0/0:40,0:41:96.24:0,96,1123	0/0:27,0:28:81.08:0,81,922	0/0:10,0:10:21.06:0,21,254	0/0:21,1:22:45.27:0,45,626	0/0:23,0:23:56.58:0,57,687	0/0:34,0:34:93.27:0,93,1102	0/0:15,0:15:36.11:0,36,435	0/0:32,0:32:93.29:0,93,1123	0/0:20,0:20:54.16:0,54,642	0/0:17,0:17:51.16:0,51,616	0/0:22,0:22:66.19:0,66,786	0/0:20,0:20:54.14:0,54,631	0/0:24,0:24:66.20:0,66,797	0/0:18,0:18:51.02:0,51,555	0/0:12,0:12:30.07:0,30,342	0/0:29,0:29:78.24:0,78,941	0/0:24,0:24:69.17:0,69,807	0/0:20,0:20:54.17:0,54,652	0/0:24,0:24:63.19:0,63,761	0/0:26,0:26:72.21:0,72,859	0/0:29,0:29:81.24:0,81,967	0/0:24,0:24:63.18:0,63,742	0/0:29,0:28:81.25:0,81,978	0/0:17,0:17:51.16:0,51,616
chr10	94377567	.	GTTGT	G	289.46	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.594;DP=637;FS=7.910;HRun=0;HaplotypeScore=111.2976;InbreedingCoeff=0.9950;MQ=80.15;MQ0=0;MQRankSum=-1.699;QD=22.27;ReadPosRankSum=0.869;VQSLOD=2.6914;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.26:0,75,1929	0/0:13,0:13:39.13:0,39,1008	0/0:18,0:18:36.48:0,36,999	0/0:14,0:14:39.13:0,39,917	0/0:34,0:34:99:0,99,2579	0/0:23,0:23:63.22:0,63,1639	0/0:15,0:15:39.13:0,39,986	0/0:40,0:40:99:0,114,2838	0/0:19,0:19:57.18:0,57,1439	0/0:31,0:31:90.31:0,90,2301	0/0:21,0:21:57.16:0,57,1349	0/0:21,0:21:57.20:0,57,1488	0/0:20,0:20:57.20:0,57,1464	0/0:28,0:28:75.26:0,75,1961	0/0:26,0:26:72.25:0,72,1878	0/0:18,0:18:51.16:0,51,1283	1/1:2,11:13:21.07:382,21,0	0/0:12,0:13:36.12:0,36,882	0/0:27,0:27:72.07:0,72,1867	0/0:32,0:32:93.31:0,93,2375	0/0:20,0:20:57.20:0,57,1395	0/0:16,0:16:39.13:0,39,993	0/0:20,0:20:57.18:0,57,1428	0/0:11,0:11:30.10:0,30,785	0/0:24,0:24:66.23:0,66,1701	0/0:26,0:26:75.26:0,75,1964	0/0:41,0:41:99:0,120,3072	0/0:27,0:27:81.28:0,81,2122
chr10	94377762	.	A	AT	5657.18	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=5.032;DP=478;FS=1.181;HRun=6;HaplotypeScore=52.5019;InbreedingCoeff=0.9809;MQ=72.22;MQ0=0;MQRankSum=0.070;QD=32.89;ReadPosRankSum=1.850;VQSLOD=4.9855;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.05:0,54,530	1/1:1,8:9:24.08:302,24,0	0/0:7,0:7:14.31:0,14,128	0/0:11,0:11:8.73:0,9,223	1/1:4,35:39:99:1321,105,0	0/0:13,0:13:39.09:0,39,398	0/0:12,0:12:36.08:0,36,367	0/0:32,0:32:84.16:0,84,843	1/1:2,13:15:39.12:491,39,0	1/1:5,18:23:57.18:715,57,0	1/1:0,26:26:69.18:850,69,0	0/0:8,0:8:21.05:0,21,214	0/0:10,0:10:24.05:0,24,245	0/0:13,0:13:39.07:0,39,390	1/1:1,18:19:48.15:604,48,0	1/1:0,11:11:30.10:377,30,0	0/0:16,0:16:42.09:0,42,429	1/1:2,9:11:12.25:318,12,0	0/0:15,0:15:39.09:0,39,398	0/0:24,0:24:69.14:0,69,696	0/0:9,0:9:27.06:0,27,275	0/0:16,0:16:45.08:0,45,452	0/0:22,0:22:57.13:0,57,582	0/0:8,0:8:24.05:0,24,245	1/1:1,18:19:54.17:679,54,0	0/0:22,0:22:66.15:0,66,673	0/0:33,0:32:87.15:0,87,872	0/0:15,0:15:45.10:0,45,459
chr10	94378584	.	CGT	C	2782.64	PASS	AB=0.825;AC=21;AF=0.375;AN=56;BaseQRankSum=-0.638;DP=874;FS=6.042;HRun=0;HaplotypeScore=164.8333;InbreedingCoeff=0.3612;MQ=55.90;MQ0=13;MQRankSum=1.376;QD=5.96;ReadPosRankSum=3.140;VQSLOD=3.0368;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:37:2.53:14,3,0	0/0:5,0:10:3.22:0,3,13	0/0:42,0:4:3.01:0,3,46	0/0:60,0:11:11.98:0,12,128	0/0:9,0:19:11.50:0,11,94	0/0:22,0:23:21.07:0,21,321	0/1:24,7:30:99:138,0,306	1/1:22,0:30:27.33:139,27,0	0/0:15,0:36:20.32:0,20,122	0/0:18,0:37:51.34:0,51,376	0/0:13,0:18:3:0,3,26	0/1:35,7:43:99:100,0,1104	0/0:29,4:33:19.94:0,20,682	0/1:30,6:38:99:116,0,689	0/0:11,0:26:13.70:0,14,59	0/0:11,0:23:15.94:0,16,72	0/1:20,3:24:85.70:86,0,411	0/0:17,0:33:22.79:0,23,207	1/1:17,6:24:20.86:219,21,0	1/1:11,18:30:35.93:390,36,0	0/1:43,29:78:0.29:778,0,0	0/0:17,0:17:24.05:0,24,314	0/1:19,3:21:41.31:41,0,270	0/1:39,7:46:83.70:84,0,989	0/0:5,0:28:8.25:0,8,59	1/1:13,13:30:31.79:479,32,0	1/1:7,11:20:35.77:370,36,0	1/1:6,0:12:2.84:14,3,0
chr10	94379130	.	G	GA	5066.60	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=7.064;DP=677;FS=0.341;HRun=8;HaplotypeScore=79.2033;InbreedingCoeff=0.9969;MQ=92.19;MQ0=0;MQRankSum=-2.850;QD=29.12;ReadPosRankSum=2.132;VQSLOD=4.8544;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,120,1092	0/0:7,0:7:21.01:0,21,192	0/0:32,1:33:68.31:0,68,672	0/0:27,0:27:59.16:0,59,514	0/0:29,0:29:72.04:0,72,659	1/1:1,15:16:20.69:492,21,0	1/1:2,13:15:39.12:450,39,0	0/0:36,0:38:94.10:0,94,826	0/0:32,0:32:87.03:0,87,792	0/0:27,0:28:71.06:0,71,632	0/0:22,0:22:60.02:0,60,545	1/1:1,24:25:66.20:762,66,0	1/1:8,17:25:23.68:524,24,0	1/1:0,12:12:30.09:346,30,0	0/0:24,0:24:69.04:0,69,631	0/0:33,0:32:84:0,84,758	1/1:2,26:28:69.21:796,69,0	0/0:13,0:13:36.02:0,36,329	0/0:28,0:28:77.97:0,78,700	0/0:20,0:20:48.02:0,48,439	0/0:25,0:25:66.03:0,66,604	1/1:0,7:7:21.06:242,21,0	1/1:1,14:15:39.12:450,39,0	1/1:2,29:31:87.26:1004,87,0	0/0:24,0:24:72.01:0,72,648	0/0:38,0:38:87.02:0,87,790	0/0:28,0:28:78:0,78,704	0/0:7,0:7:21.01:0,21,192
chr10	94379620	.	GA	G	2102.74	PASS	AB=0.941;AC=17;AF=0.304;AN=56;BaseQRankSum=9.260;DP=323;FS=9.885;HRun=7;HaplotypeScore=67.9359;InbreedingCoeff=0.8546;MQ=66.27;MQ0=7;MQRankSum=-6.727;QD=19.47;ReadPosRankSum=3.194;VQSLOD=2.7342;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:0,0:9:5.36:0,5,14	0/0:3,0:3:9.03:0,9,113	0/0:32,2:15:39.11:0,39,488	0/1:15,0:8:14.25:14,0,157	0/0:15,0:15:36.11:0,36,448	1/1:2,10:11:31.62:309,32,0	1/1:1,17:18:45.10:458,45,0	0/0:15,0:15:42.13:0,42,529	0/0:6,0:6:18.06:0,18,226	0/0:13,0:13:33.11:0,33,415	0/0:8,0:8:24.08:0,24,300	1/1:0,10:10:30.07:305,30,0	1/1:1,7:8:12.02:122,12,0	1/1:2,9:11:27.05:275,27,0	0/0:7,0:7:21.07:0,21,259	0/0:4,0:4:12.04:0,12,149	0/0:17,0:16:48.14:0,48,583	0/0:12,0:11:5.41:0,5,313	0/0:10,0:9:24.07:0,24,291	0/0:6,0:6:18.04:0,18,213	0/0:18,0:17:45.10:0,45,547	1/1:0,12:12:33.07:336,33,0	1/1:2,11:13:33.07:335,33,0	1/1:1,7:8:15.03:153,15,0	0/0:13,0:13:33.10:0,33,415	0/0:13,0:13:33.09:0,33,402	0/0:7,0:7:21.07:0,21,264	0/0:5,0:5:15.05:0,15,189
chr10	94383219	.	GA	G	2721.71	PASS	AB=0.944;AC=18;AF=0.321;AN=56;BaseQRankSum=2.720;DP=661;FS=4.605;HRun=10;HaplotypeScore=105.2441;InbreedingCoeff=0.8902;MQ=56.81;MQ0=19;MQRankSum=-0.199;QD=13.89;ReadPosRankSum=2.260;VQSLOD=3.7713;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,2:47:50.95:0,51,797	0/1:7,1:8:4.62:5,0,98	0/0:47,0:11:23.62:0,24,221	0/1:28,0:12:0.94:1,0,124	0/0:23,0:23:50.88:0,51,306	1/1:4,14:17:26.58:342,27,0	1/1:3,9:12:29.99:257,30,0	0/0:27,1:22:30.91:0,31,536	0/0:14,0:14:27.30:0,27,170	0/0:33,0:33:68.84:0,69,409	0/0:13,0:13:26.60:0,27,176	1/1:6,15:21:50.89:420,51,0	1/1:8,10:19:34.74:279,35,0	1/1:1,12:13:29.90:245,30,0	0/0:23,0:23:44.39:0,44,262	0/0:21,0:21:48.52:0,49,309	0/0:27,0:27:41.54:0,42,188	0/0:14,0:15:35.18:0,35,229	0/0:31,0:26:69.15:0,69,735	0/0:21,0:20:51.13:0,51,559	0/0:14,0:14:30.08:0,30,331	1/1:2,17:19:35.98:305,36,0	1/1:2,23:25:53.98:463,54,0	1/1:8,25:30:71.92:611,72,0	0/0:24,0:24:36.63:0,37,213	0/0:19,0:18:45.12:0,45,498	0/0:38,0:39:88.86:0,89,1095	0/0:23,0:22:56.92:0,57,598
chr10	94383230	.	GA	G	7554.61	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=10.953;DP=664;FS=5.921;HRun=10;HaplotypeScore=95.7600;InbreedingCoeff=0.9991;MQ=58.33;MQ0=12;MQRankSum=1.121;QD=18.43;ReadPosRankSum=4.456;VQSLOD=5.2750;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,37:45:99:904,99,0	1/1:9,2:11:29.24:219,29,0	0/0:45,0:12:29.50:0,30,258	0/0:30,0:14:30.30:0,30,228	1/1:25,0:24:56.06:379,56,0	1/1:3,16:18:54.03:490,54,0	1/1:2,12:14:30.01:271,30,0	0/0:33,0:31:84.21:0,84,948	1/1:14,0:14:29.30:190,29,0	1/1:30,0:30:67.58:503,68,0	1/1:17,0:17:44.14:317,44,0	1/1:4,16:20:44.97:395,45,0	1/1:3,11:14:38.90:331,39,0	1/1:7,9:16:38.73:334,39,0	1/1:24,2:26:57.58:417,58,0	1/1:22,0:22:60.84:405,61,0	1/1:26,1:27:48.75:344,49,0	1/1:12,0:12:24.11:138,24,0	0/0:26,1:25:35.71:0,36,656	0/0:24,0:23:60.17:0,60,681	0/0:15,0:15:36.09:0,36,403	1/1:8,11:19:36.01:322,36,0	1/1:8,19:27:63.01:564,63,0	1/1:7,27:31:87.04:786,87,0	1/1:16,2:18:37.32:244,37,0	0/0:21,0:20:57.17:0,57,655	0/0:38,0:38:99:0,102,1127	0/0:21,0:21:48.14:0,48,554
chr10	94383231	.	A	AG	2097.37	PASS	AB=0.981;AC=32;AF=0.571;AN=56;BaseQRankSum=14.128;DP=667;FS=4.949;HRun=1;HaplotypeScore=114.9001;InbreedingCoeff=0.7095;MQ=58.44;MQ0=11;MQRankSum=2.055;QD=5.64;ReadPosRankSum=5.725;VQSLOD=0.7580;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:96.96:0,97,530	0/1:11,0:11:6.34:26,0,6	0/0:42,0:12:25.20:0,25,317	0/0:30,0:14:12.14:0,12,271	1/1:25,1:25:30.51:170,31,0	1/1:20,0:19:24.86:96,25,0	1/1:14,0:14:7.33:48,7,0	0/0:33,0:31:87.28:0,87,1178	1/1:15,0:15:12.60:52,13,0	1/1:31,0:31:13.99:199,14,0	1/1:17,0:17:25.09:82,25,0	0/1:21,0:21:15.01:57,0,15	1/1:14,0:14:18.20:58,18,0	0/1:16,0:16:15.81:44,0,16	1/1:29,0:29:17.55:166,18,0	1/1:23,0:23:38.32:158,38,0	1/1:4,22:27:27.25:585,27,0	0/1:11,0:12:5.93:53,0,6	0/0:27,0:25:69:0,69,887	0/0:24,0:23:63.18:0,63,842	0/0:16,0:16:39.08:0,39,503	1/1:19,0:19:10.73:77,11,0	1/1:25,0:25:40.77:139,41,0	1/1:34,0:31:52.67:159,53,0	1/1:18,0:18:30.64:144,31,0	0/0:20,0:19:57.19:0,57,793	0/0:38,0:38:99:0,111,1472	0/0:21,0:21:60.16:0,60,770
chr10	94383626	.	TA	T	1511.74	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.853;DP=711;FS=1.988;HRun=2;HaplotypeScore=68.6553;InbreedingCoeff=0.9932;MQ=62.02;MQ0=2;MQRankSum=0.879;QD=26.52;ReadPosRankSum=2.776;VQSLOD=3.5466;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,53:55:99:1607,101,0	0/0:10,0:10:30.09:0,30,432	0/0:17,0:7:21.06:0,21,295	0/0:20,1:13:33.11:0,33,482	0/0:24,0:24:69.23:0,69,1034	0/0:21,0:20:63.21:0,63,942	0/0:30,0:30:78.18:0,78,1105	0/0:26,0:25:75.25:0,75,1103	0/0:27,0:27:78.25:0,78,1147	0/0:24,0:24:72.23:0,72,1035	0/0:24,0:24:69.23:0,69,1029	0/0:18,0:18:54.18:0,54,805	0/0:23,0:23:69.22:0,69,1003	0/0:29,0:29:81.27:0,81,1214	0/0:25,0:25:75.25:0,75,1124	0/0:38,0:38:99:0,111,1640	0/0:23,0:23:66.22:0,66,989	0/0:31,0:27:75.21:0,75,1099	0/0:18,0:18:51.17:0,51,755	0/0:28,0:28:78.25:0,78,1143	0/0:38,0:38:99:0,114,1682	0/0:30,0:30:81.27:0,81,1214	0/0:34,0:34:99:0,99,1462	0/0:19,0:19:57.19:0,57,848	0/0:16,0:16:45.15:0,45,675	0/0:30,0:30:87.28:0,87,1259	0/0:22,0:22:63.20:0,63,918	0/0:8,0:8:24.08:0,24,360
chr10	94384697	.	A	AT	7936.75	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-15.762;DP=678;FS=0.304;HRun=8;HaplotypeScore=60.7684;InbreedingCoeff=0.9992;MQ=77.82;MQ0=0;MQRankSum=0.081;QD=28.97;ReadPosRankSum=2.500;VQSLOD=5.0151;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,26:32:75.22:865,75,0	1/1:2,13:15:36.11:415,36,0	0/0:18,0:18:32.97:0,33,292	0/0:17,0:17:28.73:0,29,281	1/1:6,29:35:87.26:1001,87,0	0/0:24,0:24:66.04:0,66,604	0/0:17,0:17:42.02:0,42,384	0/0:37,0:37:86.98:0,87,778	1/1:2,19:21:54.16:622,54,0	1/1:4,38:42:99:1315,114,0	1/1:3,17:20:48.10:539,48,0	0/0:18,0:18:51.02:0,51,463	0/0:28,0:28:72.01:0,72,654	0/0:23,0:23:63.03:0,63,577	1/1:2,26:27:69.21:796,69,0	1/1:1,20:21:54.16:623,54,0	1/1:1,22:22:63.19:727,63,0	1/1:4,14:18:48.14:547,48,0	0/0:22,0:22:45.01:0,45,412	0/0:39,0:39:99:0,108,988	0/0:19,0:19:32.28:0,32,440	0/0:28,0:28:75.03:0,75,686	0/0:27,0:27:72.04:0,72,659	0/0:15,0:15:42.02:0,42,384	1/1:5,14:19:42.12:485,42,0	0/0:29,0:29:81.02:0,81,738	0/0:30,0:30:87.05:0,87,796	0/0:13,0:13:21.01:0,21,192
chr10	94386272	.	A	AACACAC	1662.78	PASS	AB=0.932;AC=18;AF=0.360;AN=50;BaseQRankSum=-2.114;DP=394;FS=12.699;HRun=0;HaplotypeScore=115.4329;InbreedingCoeff=0.4834;MQ=77.71;MQ0=11;MQRankSum=-0.327;QD=11.47;ReadPosRankSum=2.883;VQSLOD=1.6122;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:3.71:0,4,33	1/1:6,0:6:6.02:90,6,0	./.	./.	0/1:16,3:19:54.34:75,0,54	0/0:13,0:13:9.02:0,9,135	0/0:16,0:16:6.01:0,6,69	0/0:13,0:13:8.99:0,9,104	1/1:14,0:15:9.03:232,9,0	1/1:17,0:16:15.50:226,15,0	0/0:7,1:8:0.47:0,0,1	0/0:8,0:7:3.01:0,3,38	0/0:7,0:6:5.38:0,5,60	0/0:10,0:10:1.91:0,2,161	1/1:16,0:16:9.02:216,9,0	1/1:17,0:17:14.92:243,15,0	0/0:17,0:16:0.47:0,0,1	1/1:13,0:13:21.02:325,21,0	0/0:5,0:5:3.01:0,3,49	0/0:7,0:9:6.02:0,6,102	0/0:26,0:25:17.95:0,18,201	0/0:8,0:8:0.15:0,0,1	1/1:4,0:4:3:26,3,0	0/0:19,0:19:13.86:0,14,243	1/1:24,0:22:11.70:286,12,0	0/1:12,0:12:73:104,0,73	./.	0/0:4,0:4:5.51:0,6,69
chr10	94386318	.	A	AACGC	3730.86	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=4.779;DP=462;FS=11.100;HRun=0;HaplotypeScore=116.4228;InbreedingCoeff=0.5776;MQ=51.14;MQ0=22;MQRankSum=-4.251;QD=11.17;ReadPosRankSum=-1.257;VQSLOD=2.1758;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:26:9.17:188,9,0	1/1:5,0:5:6.02:140,6,0	0/0:22,0:15:27.27:0,27,438	0/0:16,0:7:9.09:0,9,163	1/1:16,0:16:14.59:294,15,0	0/1:21,0:19:5.05:114,0,5	1/1:22,0:22:13.67:141,14,0	0/0:13,0:13:21.06:0,21,297	1/1:7,14:21:6.02:76,6,0	1/1:24,0:24:45.08:887,45,0	1/1:11,0:11:14.98:165,15,0	1/1:12,0:12:0.09:131,0,0	0/1:17,0:17:3.94:41,0,4	0/1:24,0:23:29.75:249,0,30	1/1:4,9:14:8.82:105,9,0	1/1:4,8:12:5.69:107,6,0	1/1:20,0:20:8.96:129,9,0	1/1:17,0:17:21.07:473,21,0	0/0:21,0:21:33.07:0,33,484	0/0:9,0:9:18.06:0,18,296	0/0:27,0:21:41.82:0,42,656	1/1:17,0:17:37.92:274,38,0	1/1:15,0:15:17.01:108,17,0	0/1:20,0:20:33.12:33,0,75	1/1:11,5:16:5.69:76,6,0	0/0:13,0:13:27.05:0,27,414	0/0:3,0:3:9.03:0,9,148	0/0:4,0:4:6.02:0,6,98
chr10	94386324	.	C	CGCAT	1530.69	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=6.983;DP=475;FS=49.628;HRun=0;HaplotypeScore=119.2830;InbreedingCoeff=-0.0163;MQ=58.44;MQ0=19;MQRankSum=0.740;QD=5.89;ReadPosRankSum=4.216;VQSLOD=0.3647;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:27:12.46:114,12,0	0/1:4,0:4:12.96:90,0,13	0/0:26,0:19:36.64:0,37,625	0/0:21,0:11:21.60:0,22,311	0/1:14,0:14:4.85:183,0,5	0/1:22,0:21:3.08:3,0,118	0/0:23,0:23:21.35:0,21,170	0/0:11,0:11:27.03:0,27,429	0/1:22,0:22:35.29:35,0,45	0/1:22,0:22:5.83:486,0,6	0/1:12,0:12:21.53:78,0,22	0/1:13,0:13:20.71:21,0,65	0/0:18,0:18:12.98:0,13,105	0/1:21,0:20:16.76:17,0,176	0/1:14,0:14:1.58:58,0,2	0/1:11,0:11:36.30:70,0,36	1/1:2,24:26:14.19:207,14,0	0/1:15,0:15:40.78:281,0,41	0/0:24,0:24:65.62:0,66,822	0/0:10,0:10:21.05:0,21,364	0/0:26,0:20:51.07:0,51,840	0/1:17,0:17:19.52:24,0,20	0/0:14,0:14:3.15:0,3,69	0/0:20,0:20:9.59:0,10,176	0/1:18,0:18:29.48:29,0,76	0/0:12,0:12:35.87:0,36,549	0/0:5,0:5:11.99:0,12,189	0/0:5,0:5:9:0,9,134
chr10	94386327	.	A	ACGCACGCA	5006.24	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=5.954;DP=472;FS=10.003;HRun=0;HaplotypeScore=132.7083;InbreedingCoeff=0.7674;MQ=63.89;MQ0=14;MQRankSum=-2.571;QD=15.36;ReadPosRankSum=0.304;VQSLOD=2.9092;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:16.35:21,0,16	1/1:4,0:4:5.96:43,6,0	0/0:28,0:21:6.02:0,6,544	0/0:23,0:13:4.38:0,4,191	1/1:15,0:15:14.64:100,15,0	1/1:22,0:22:23.80:535,24,0	1/1:22,0:22:36.07:555,36,0	0/0:11,0:11:21.06:0,21,397	1/1:21,0:21:5.88:36,6,0	1/1:20,0:20:42.40:335,42,0	1/1:11,0:11:13.71:84,14,0	1/1:14,0:14:24.04:515,24,0	1/1:8,9:18:17.51:218,18,0	1/1:20,0:20:29.75:935,30,0	1/1:14,0:14:7.94:37,8,0	1/1:11,0:11:5.75:39,6,0	1/1:27,0:27:11.76:58,12,0	1/1:15,0:15:20.90:159,21,0	0/0:24,0:24:33.07:0,33,634	0/0:12,0:12:17.96:0,18,400	0/0:26,0:21:42.05:0,42,937	1/1:16,0:16:39.02:781,39,0	1/1:15,0:15:17.63:308,18,0	1/1:18,0:18:20.14:212,20,0	1/1:17,0:17:5.58:36,6,0	0/0:12,0:12:27.05:0,27,615	0/0:5,0:5:9.03:0,9,231	0/0:5,0:5:6.02:0,6,154
chr10	94386339	.	A	ACGCA	3894.92	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=4.688;DP=478;FS=9.815;HRun=0;HaplotypeScore=106.6900;InbreedingCoeff=0.5855;MQ=77.58;MQ0=1;MQRankSum=-4.577;QD=11.80;ReadPosRankSum=3.336;VQSLOD=2.5729;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:30:15:195,15,0	1/1:6,0:6:6.02:140,6,0	0/0:27,0:26:27.27:0,27,438	0/0:24,0:20:9.09:0,9,163	1/1:13,0:13:14.73:294,15,0	0/1:20,0:20:4.84:114,0,5	1/1:22,0:22:13.67:141,14,0	0/0:17,0:17:21.06:0,21,297	1/1:23,0:23:6.02:76,6,0	1/1:19,0:19:48.07:946,48,0	1/1:4,7:11:14.98:165,15,0	1/1:13,0:13:0.09:131,0,0	0/1:17,0:17:3.94:41,0,4	0/1:23,0:23:29.75:249,0,30	1/1:12,0:12:6.02:92,6,0	1/1:12,0:12:9.03:177,9,0	1/1:24,0:24:8.96:129,9,0	1/1:14,0:14:27.06:532,27,0	0/0:20,0:20:33.07:0,33,484	0/0:13,0:13:18.06:0,18,296	0/0:20,0:18:42.09:0,42,656	1/1:20,0:20:36.72:255,37,0	1/1:13,0:13:17.25:108,17,0	0/1:18,0:18:33.23:33,0,75	1/1:20,0:20:5.81:75,6,0	0/0:14,0:14:27.05:0,27,414	0/0:9,0:9:9.03:0,9,148	0/0:4,0:4:6.02:0,6,98
chr10	94388007	.	G	GA	13097.92	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-1.340;DP=865;FS=6.905;HRun=0;HaplotypeScore=98.2744;InbreedingCoeff=1.0000;MQ=80.87;MQ0=0;MQRankSum=-3.257;QD=44.10;ReadPosRankSum=2.843;VQSLOD=4.7988;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,42:46:99:2103,130,0	0/0:12,0:12:36.12:0,36,503	0/0:32,0:32:89.66:0,90,1204	0/0:24,0:24:63.17:0,63,828	0/0:28,0:28:84.28:0,84,1171	1/1:1,17:18:42.14:671,42,0	1/1:0,32:32:87.30:1391,87,0	0/0:40,0:40:99:0,120,1678	0/0:25,0:25:72.24:0,72,1007	0/0:41,0:41:99:0,123,1721	0/0:35,0:35:99:0,102,1424	1/1:0,25:25:72.25:1151,72,0	1/1:1,29:30:81.28:1295,81,0	1/1:1,21:22:63.17:978,63,0	0/0:36,0:36:99:0,108,1510	0/0:40,0:40:99:0,120,1626	1/1:0,30:30:81.28:1294,81,0	0/0:28,0:28:84.28:0,84,1174	0/0:33,0:33:96.31:0,96,1327	0/0:31,0:31:90.30:0,90,1258	0/0:44,0:44:99:0,126,1744	1/1:0,33:33:93.32:1486,93,0	1/1:0,26:26:78.27:1246,78,0	1/1:2,33:35:93.32:1483,93,0	0/0:28,0:28:81.26:0,81,1117	0/0:47,0:47:99:0,141,1939	0/0:31,0:31:93.31:0,93,1300	0/0:13,0:13:39.13:0,39,545
chr10	94388158	.	GTTAATTGGTTGGT	G	5491.01	PASS	AB=0.615;AC=11;AF=0.196;AN=56;BaseQRankSum=9.099;DP=753;FS=1.052;HRun=0;HaplotypeScore=251.9060;InbreedingCoeff=0.4275;MQ=51.94;MQ0=26;MQRankSum=-5.390;QD=50.38;ReadPosRankSum=0.588;VQSLOD=3.9818;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,148,5650	0/0:8,0:8:24.08:0,24,828	0/0:43,0:4:12.04:0,12,218	0/0:33,0:13:35.89:0,36,532	0/0:31,0:30:84.29:0,84,2773	0/1:6,6:11:14.46:867,0,14	0/1:2,16:18:30.71:102,0,31	0/0:44,0:42:99:0,123,3056	0/0:26,0:26:75.24:0,75,3214	0/0:34,0:32:96.29:0,96,2998	0/0:18,0:18:48.12:0,48,1701	1/1:6,6:15:39.13:1200,39,0	1/1:3,5:10:26.12:798,26,0	1/1:0,10:10:14.95:599,15,0	0/0:21,0:21:60.21:0,60,2260	0/0:33,0:33:99:0,99,3687	0/0:49,0:48:67.03:0,67,5918	0/0:36,0:35:99:0,102,3773	0/0:28,0:23:66.19:0,66,2357	0/0:28,0:28:78.26:0,78,2730	0/0:55,0:54:99:0,156,5436	0/1:4,19:23:45.62:950,0,46	0/1:2,2:4:99:212,0,107	0/1:8,3:14:55.12:763,0,55	0/0:31,0:31:81.28:0,81,2829	0/0:29,0:29:87.28:0,87,2987	0/0:32,0:32:96.33:0,96,3550	0/0:13,0:13:14.59:0,15,1422
chr10	94388162	.	ATTGG	A	1070.71	PASS	AB=0.957;AC=14;AF=0.250;AN=56;BaseQRankSum=10.360;DP=742;FS=21.016;HRun=0;HaplotypeScore=141.9823;InbreedingCoeff=0.7772;MQ=52.12;MQ0=28;MQRankSum=-7.163;QD=10.50;ReadPosRankSum=0.689;VQSLOD=1.9364;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,1:55:75.19:0,75,2740	0/0:8,0:8:21.05:0,21,440	0/0:41,0:3:3.01:0,3,74	0/0:33,0:12:11.18:0,11,107	0/0:29,1:29:3.01:0,3,1189	1/1:10,1:10:23.58:216,24,0	1/1:19,0:19:11.83:147,12,0	0/0:42,0:40:63.21:0,63,1389	0/0:26,0:26:63.22:0,63,1518	0/0:32,0:30:57.18:0,57,1333	0/0:19,0:19:48.16:0,48,1168	1/1:13,0:12:14.83:111,15,0	1/1:7,1:8:19.92:170,20,0	1/1:10,0:10:14.85:125,15,0	0/0:21,0:21:57.16:0,57,1312	0/0:33,0:33:84.27:0,84,2051	0/0:48,0:47:99:0,126,3062	0/0:36,1:36:78.38:0,78,2023	0/0:28,0:22:48.16:0,48,1197	0/0:29,0:29:81.28:0,81,1914	0/0:53,0:52:94.72:0,95,2890	0/1:19,2:21:0.66:247,0,1	0/1:5,0:5:41.36:109,0,41	1/1:15,0:14:15.92:131,16,0	0/0:29,0:29:81.28:0,81,1922	0/0:29,0:29:78.26:0,78,1790	0/0:34,0:34:87.28:0,87,2019	0/0:13,0:13:24.08:0,24,575
chr10	94388435	.	G	GTTGGTTGGTTAA	10320.44	PASS	AB=0.777;AC=34;AF=0.630;AN=54;BaseQRankSum=4.956;DP=668;FS=8.022;HRun=0;HaplotypeScore=179.9748;InbreedingCoeff=0.7715;MQ=47.22;MQ0=23;MQRankSum=-6.100;QD=28.12;ReadPosRankSum=-2.569;VQSLOD=3.1947;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,3:21:29.91:1505,30,0	1/1:4,0:4:12.04:333,12,0	0/0:39,0:12:13.31:0,13,424	0/0:32,0:12:33.10:0,33,660	1/1:5,22:29:11.97:290,12,0	1/1:8,13:21:14.54:322,15,0	1/1:18,0:17:24.13:772,24,0	0/0:28,0:28:54.18:0,54,1413	1/1:3,24:30:3.01:180,3,0	1/1:19,0:17:10.04:627,10,0	1/1:8,0:7:12.04:299,12,0	0/1:22,1:18:27.22:801,0,27	1/1:4,23:28:6.20:205,6,0	1/1:5,18:28:9.92:433,10,0	1/1:3,20:26:8.86:527,9,0	./.	0/1:8,17:22:4.75:418,0,5	1/1:18,2:19:11.95:882,12,0	0/0:26,0:17:42.14:0,42,1108	0/0:37,0:37:99:0,99,2787	0/0:48,0:48:89.96:0,90,3085	1/1:19,0:18:45.14:872,45,0	1/1:13,0:12:18.06:489,18,0	1/1:21,2:22:43.87:965,44,0	1/1:8,0:8:18.06:402,18,0	0/0:24,0:23:57.20:0,57,1795	0/0:30,0:30:84.29:0,84,2499	0/0:15,0:15:36.12:0,36,865
chr10	94388482	.	ATTGG	A	674.19	PASS	AB=0.933;AC=3;AF=0.054;AN=56;BaseQRankSum=5.451;DP=666;FS=5.928;HRun=0;HaplotypeScore=151.9044;InbreedingCoeff=0.6016;MQ=50.62;MQ0=16;MQRankSum=-2.810;QD=13.48;ReadPosRankSum=0.165;VQSLOD=2.9112;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:43.21:0,43,1789	0/0:8,0:7:18.06:0,18,446	0/0:23,0:6:8.86:0,9,141	0/0:22,0:9:12.04:0,12,231	0/0:35,0:34:63.22:0,63,1519	0/0:19,0:17:36.12:0,36,882	0/0:26,0:26:74.28:0,74,1754	0/0:33,0:33:63.21:0,63,1477	0/0:17,0:17:21.07:0,21,494	0/0:15,0:14:39.13:0,39,879	0/0:12,0:12:33.11:0,33,804	0/0:22,0:20:54.19:0,54,1341	0/0:30,0:29:60.21:0,60,1452	0/0:19,0:19:27.09:0,27,669	0/0:27,0:27:35.96:0,36,877	0/0:20,0:19:27.09:0,27,674	1/1:9,13:19:42.14:716,42,0	0/0:32,1:33:30.63:0,31,1822	0/0:26,0:20:39.13:0,39,954	0/0:27,0:27:72.25:0,72,1803	0/0:40,0:40:96.26:0,96,2265	0/0:24,0:24:70.48:0,70,1644	0/0:18,0:18:51.04:0,51,1183	0/1:26,2:28:64.06:64,0,1103	0/0:21,0:21:63.22:0,63,1508	0/0:24,0:23:51.17:0,51,1227	0/0:22,0:22:51.18:0,51,1251	0/0:18,0:18:48.16:0,48,1177
chr10	94388595	.	G	GT	828.83	PASS	AB=0.933;AC=3;AF=0.054;AN=56;BaseQRankSum=-0.669;DP=574;FS=18.344;HRun=8;HaplotypeScore=75.8265;InbreedingCoeff=0.6260;MQ=59.49;MQ0=3;MQRankSum=-1.639;QD=14.29;ReadPosRankSum=0.145;VQSLOD=1.9983;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:30:83.90:918,84,0	0/0:17,0:16:38.03:0,38,329	0/0:23,0:11:17.65:0,18,137	0/0:30,0:13:12.08:0,12,160	0/0:32,0:31:77.93:0,78,702	0/0:18,0:18:50.98:0,51,458	0/0:14,0:14:35.90:0,36,308	0/0:28,0:28:72.01:0,72,649	0/0:16,0:16:32.99:0,33,301	0/0:24,0:23:63.01:0,63,570	0/0:23,0:20:53.96:0,54,486	0/0:14,0:14:33.01:0,33,301	0/0:12,0:12:30.02:0,30,274	0/0:18,0:18:22.76:0,23,374	0/0:13,0:13:34.17:0,34,282	0/0:9,0:9:24.01:0,24,220	0/0:12,0:12:24.01:0,24,219	0/0:24,0:24:57.01:0,57,523	0/0:24,0:21:59.06:0,59,525	0/0:36,0:34:77.76:0,78,683	0/0:17,0:17:36.02:0,36,329	0/0:26,0:26:69.01:0,69,624	0/1:26,2:24:15.18:15,0,385	0/0:16,0:16:42.02:0,42,384	0/0:18,0:17:45.02:0,45,412	0/0:25,0:25:65.95:0,66,593	0/0:19,0:18:48.01:0,48,439	0/0:6,0:5:15.01:0,15,137
chr10	94388638	.	T	TC	3535.12	PASS	AB=0.968;AC=41;AF=0.732;AN=56;BaseQRankSum=-4.531;DP=496;FS=113.915;HRun=0;HaplotypeScore=76.5093;InbreedingCoeff=-0.2610;MQ=53.78;MQ0=72;MQRankSum=2.562;QD=7.72;ReadPosRankSum=-1.598;VQSLOD=0.3121;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:10:26.56:176,27,0	1/1:11,0:9:2.09:138,2,0	0/0:38,0:8:1.21:0,1,64	0/1:37,0:15:13.87:14,0,95	1/1:27,0:22:12.19:206,12,0	1/1:9,0:8:17.59:112,18,0	1/1:7,0:4:11.77:71,12,0	0/1:27,0:24:84.04:168,0,84	0/1:13,0:13:25.60:65,0,26	1/1:21,0:17:2.07:189,2,0	1/1:22,0:17:11.87:148,12,0	1/1:5,0:5:11.73:71,12,0	0/1:6,0:5:5.33:56,0,5	1/1:7,0:7:17.65:109,18,0	0/1:9,0:8:22.20:33,0,22	0/1:10,0:8:5.90:40,0,6	1/1:9,0:4:11.82:75,12,0	0/1:27,0:22:27.99:188,0,28	0/1:16,16:26:43.45:384,0,43	0/1:29,1:24:48.02:223,0,48	0/1:10,0:10:44.72:89,0,45	1/1:15,0:13:35.39:230,35,0	1/1:13,0:9:23.45:137,23,0	1/1:11,0:9:19.84:111,20,0	1/1:24,0:18:29.86:164,30,0	0/1:23,0:19:76.76:136,0,77	0/1:18,1:17:8.26:143,0,8	0/1:18,0:10:34.81:61,0,35
chr10	94388656	.	TTTTG	T	590.03	PASS	AB=0.972;AC=12;AF=0.333;AN=36;BaseQRankSum=9.323;DP=381;FS=19.125;HRun=0;HaplotypeScore=97.4577;InbreedingCoeff=-0.2196;MQ=44.28;MQ0=99;MQRankSum=-5.523;QD=3.16;ReadPosRankSum=3.580;VQSLOD=-0.2254;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:5,0:2:5.25:23,5,0	0/0:17,0:2:2.04:0,2,6	0/1:15,0:6:0.11:0,0,0	0/1:26,0:21:19.37:140,0,19	./.	./.	0/0:25,0:22:53.18:0,53,638	0/1:10,2:11:42.88:120,0,43	0/1:24,0:19:45.89:46,0,195	0/1:24,1:17:45.21:122,0,45	./.	./.	./.	0/1:8,0:6:26.52:50,0,27	0/1:8,1:7:24.81:29,0,25	./.	0/1:25,0:17:68.10:93,0,68	0/0:25,0:18:50.96:0,51,566	0/0:33,0:25:54.71:0,55,561	0/0:11,0:10:21.49:0,21,293	./.	./.	./.	0/1:23,0:17:40.73:58,0,41	0/0:25,0:21:62.80:0,63,684	0/1:15,0:12:30.67:31,0,147	0/0:22,0:13:31.71:0,32,401
chr10	94389299	.	C	CA	6083.69	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=16.935;DP=654;FS=1.568;HRun=0;HaplotypeScore=92.4829;InbreedingCoeff=0.9995;MQ=91.96;MQ0=0;MQRankSum=-4.593;QD=33.43;ReadPosRankSum=3.635;VQSLOD=4.5617;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1845	0/0:20,0:20:60.13:0,60,799	0/0:34,0:34:99:0,99,1363	0/0:26,0:26:69.22:0,69,937	0/0:26,0:26:78.25:0,78,1075	1/1:1,17:18:30.06:448,30,0	1/1:1,25:26:54.15:811,54,0	0/0:20,0:19:57.17:0,57,767	0/0:25,0:25:75.22:0,75,1013	0/0:27,0:27:78.26:0,78,1075	0/0:13,0:13:39.12:0,39,527	1/1:2,17:19:42.13:629,42,0	1/1:0,13:13:36.12:531,36,0	1/1:1,16:17:42.10:620,42,0	0/0:33,0:33:99:0,99,1385	0/0:27,0:27:75.24:0,75,1033	1/1:0,31:31:84.28:1256,84,0	0/0:8,0:8:24.08:0,24,336	0/0:26,0:26:75.25:0,75,1049	0/0:23,1:24:50.26:0,50,902	0/0:30,0:30:90.28:0,90,1240	1/1:0,20:20:42.14:623,42,0	1/1:0,15:15:33.11:492,33,0	1/1:2,21:23:45.10:674,45,0	0/0:28,0:28:84.28:0,84,1175	0/0:22,0:22:60.20:0,60,836	0/0:20,0:20:57.19:0,57,797	0/0:18,0:18:54.15:0,54,721
chr10	94389849	.	TCAGA	T	2040.99	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.605;DP=485;FS=12.399;HRun=0;HaplotypeScore=76.2070;InbreedingCoeff=0.9940;MQ=88.91;MQ0=0;MQRankSum=-5.727;QD=51.02;ReadPosRankSum=-1.236;VQSLOD=3.6986;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.22:0,78,2045	0/0:7,0:7:21.07:0,21,589	0/0:15,0:15:45.05:0,45,1138	0/0:22,0:22:63.22:0,63,1712	0/0:22,0:22:66.23:0,66,1845	0/0:13,0:13:39.13:0,39,1069	0/0:11,0:11:33.11:0,33,924	1/1:2,26:28:78.27:1503,78,0	0/0:19,0:19:57.20:0,57,1594	0/0:26,0:26:78.26:0,78,2115	0/0:22,0:22:66.23:0,66,1836	0/0:8,0:8:24.08:0,24,671	0/0:8,0:8:24.08:0,24,671	0/0:11,0:11:30.10:0,30,838	0/0:15,0:15:45.14:0,45,1156	0/0:22,0:22:66.23:0,66,1814	0/0:15,0:15:39.13:0,39,1090	0/0:13,0:13:33.11:0,33,813	0/0:21,0:21:60.21:0,60,1632	0/0:28,0:28:84.27:0,84,2286	0/0:12,0:12:36.12:0,36,1007	0/0:10,0:10:30.10:0,30,839	0/0:10,0:10:30.10:0,30,839	0/0:10,0:10:27.09:0,27,755	0/0:23,0:23:69.18:0,69,1773	0/0:28,0:28:84.27:0,84,2257	0/0:28,0:28:84.29:0,84,2349	1/1:0,12:12:33.11:659,33,0
chr10	94389920	.	C	CATAT	1545.29	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=0.948;DP=445;FS=1.506;HRun=0;HaplotypeScore=75.9554;InbreedingCoeff=0.7693;MQ=76.34;MQ0=0;MQRankSum=-3.383;QD=21.76;ReadPosRankSum=-0.188;VQSLOD=3.1305;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:66.22:0,66,1090	0/0:7,0:7:21.07:0,21,358	0/0:10,0:10:0.04:0,0,142	0/0:15,0:14:0.01:0,0,70	0/0:27,0:28:78.24:0,78,1245	1/1:8,0:13:8.96:123,9,0	1/1:3,0:4:3.01:52,3,0	0/0:26,0:26:63.21:0,63,1031	0/0:28,0:28:60.20:0,60,1024	0/0:24,0:24:54.18:0,54,907	0/0:23,0:23:60.20:0,60,1000	1/1:4,0:5:3.01:53,3,0	1/1:3,0:7:9.03:158,9,0	1/1:6,0:9:9.03:158,9,0	0/0:13,0:13:30.10:0,30,512	0/0:12,0:12:33.11:0,33,563	1/1:5,15:22:42.14:1046,42,0	0/0:12,0:12:27.09:0,27,456	0/0:14,0:14:33.11:0,33,557	0/0:27,0:27:66.21:0,66,1100	0/0:14,0:14:39.13:0,39,647	1/1:6,0:6:6.01:78,6,0	1/1:5,0:5:3.01:48,3,0	./.	0/0:14,0:14:30.10:0,30,512	0/0:32,0:32:81.27:0,81,1357	0/0:29,0:30:68.46:0,68,1291	0/0:12,0:12:27.09:0,27,431
chr10	94391709	.	G	GT	3190.89	PASS	AB=0.907;AC=22;AF=0.393;AN=56;BaseQRankSum=-10.716;DP=610;FS=5.269;HRun=13;HaplotypeScore=86.7014;InbreedingCoeff=0.7941;MQ=71.05;MQ0=4;MQRankSum=-0.740;QD=12.76;ReadPosRankSum=-1.451;VQSLOD=3.2854;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:29:44.81:0,45,129	1/1:2,10:12:9.37:220,9,0	0/0:31,1:21:19.66:0,20,142	0/0:15,0:11:5.74:0,6,76	1/1:5,20:27:42.11:501,42,0	0/0:3,0:23:36.01:0,36,117	0/0:4,0:14:16.28:0,16,47	0/0:17,2:19:10.78:0,11,218	1/1:4,13:21:38.39:308,38,0	1/1:7,18:25:12.79:381,13,0	1/1:5,13:20:25.30:285,25,0	0/0:6,0:18:19.90:0,20,58	0/0:2,0:25:42.55:0,43,123	0/0:1,0:23:32.27:0,32,93	1/1:2,19:21:45.05:418,45,0	1/1:3,13:16:9.34:226,9,0	1/1:6,25:32:18.67:426,19,0	1/1:3,14:18:29.67:250,30,0	0/0:15,1:17:6.86:0,7,182	0/0:23,1:25:31.92:0,32,350	0/1:17,5:22:47.83:48,0,149	0/0:6,0:17:13.35:0,13,49	0/0:4,0:23:35.11:0,35,113	0/0:6,0:22:32.57:0,33,129	1/1:7,15:25:9.40:336,9,0	0/0:26,0:27:4.51:0,5,287	0/0:27,2:30:18.08:0,18,389	0/1:10,0:10:0.80:1,0,136
chr10	94391887	.	GGTGTGT	G	835.17	PASS	AB=0.947;AC=28;AF=0.636;AN=44;BaseQRankSum=3.585;DP=568;FS=11.645;HRun=0;HaplotypeScore=131.3577;InbreedingCoeff=0.3660;MQ=59.89;MQ0=6;MQRankSum=-2.837;QD=2.63;ReadPosRankSum=0.624;VQSLOD=2.0810;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:39.12:0,39,828	./.	./.	./.	0/0:19,0:19:1.55:0,2,4	1/1:20,0:20:9.87:100,10,0	1/1:31,0:30:8.98:92,9,0	./.	0/0:7,0:10:6.02:0,6,83	1/1:20,1:21:2.92:60,3,0	1/1:9,1:10:0.47:1,0,0	1/1:17,3:20:8.94:180,9,0	1/1:13,4:18:5.99:100,6,0	1/1:17,2:26:11.95:142,12,0	1/1:8,2:10:3.01:40,3,0	1/1:8,0:9:3.44:21,3,0	0/0:18,0:27:16.61:0,17,444	1/1:18,0:25:6.96:84,7,0	0/0:18,0:19:2.11:0,2,94	0/0:20,0:22:2.79:0,3,20	0/1:56,0:56:30.93:31,0,44	./.	1/1:18,4:22:2.59:20,3,0	1/1:15,1:18:0.47:1,0,0	0/0:20,2:22:0:0,0,0	1/1:12,1:13:3.01:60,3,0	0/1:15,0:17:33.55:37,0,34	./.
chr10	94392097	.	AAG	A	8863.87	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=10.609;DP=608;FS=12.655;HRun=0;HaplotypeScore=114.3161;InbreedingCoeff=0.8558;MQ=77.68;MQ0=6;MQRankSum=0.589;QD=20.52;ReadPosRankSum=5.039;VQSLOD=4.5205;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,19:32:51.16:614,51,0	1/1:3,6:9:12.04:145,12,0	0/0:36,1:28:13.31:0,13,336	0/1:43,0:27:17.68:18,0,323	1/1:7,16:23:7.54:455,8,0	1/1:5,17:22:36.11:434,36,0	1/1:4,11:15:27.08:326,27,0	0/0:25,0:25:33.10:0,33,490	1/1:3,17:20:45.14:543,45,0	1/1:7,28:35:84.19:964,84,0	1/1:3,19:22:3.91:466,4,0	1/1:9,17:26:66.19:785,66,0	1/1:3,15:18:48.14:568,48,0	1/1:5,14:19:30.09:361,30,0	1/1:5,16:21:45.14:542,45,0	1/1:2,11:13:30.09:362,30,0	1/1:13,0:12:19.89:100,20,0	1/1:3,11:14:21.05:253,21,0	0/0:7,0:7:12.04:0,12,184	0/0:25,0:25:51.07:0,51,710	0/0:31,0:31:66.19:0,66,1001	1/1:6,13:19:30.08:353,30,0	1/1:3,9:12:33.10:397,33,0	1/1:2,11:13:30.09:362,30,0	1/1:3,21:24:42.13:506,42,0	1/1:1,1:19:54.55:309,55,0	0/0:39,0:39:99:0,105,1434	0/0:12,0:12:27.09:0,27,429
chr10	94392098	.	AGAG	A	758.88	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.362;DP=601;FS=0.710;HRun=0;HaplotypeScore=151.8707;InbreedingCoeff=0.9809;MQ=77.15;MQ0=7;MQRankSum=-0.152;QD=23.72;ReadPosRankSum=-2.896;VQSLOD=3.1295;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:63.72:0,64,365	0/0:9,0:9:17.14:0,17,100	0/0:37,0:27:45.38:0,45,787	0/0:43,0:27:31.11:0,31,744	0/0:23,0:23:38.17:0,38,258	0/0:21,0:21:36.44:0,36,183	0/0:15,0:15:30.34:0,30,171	0/0:24,0:24:66.12:0,66,1007	0/0:20,0:20:39.55:0,40,163	0/0:34,0:34:62.26:0,62,326	0/0:22,0:22:30.22:0,30,216	0/0:26,0:26:54.18:0,54,226	0/0:19,0:19:33.36:0,33,147	0/0:19,0:19:31.71:0,32,160	0/0:21,0:21:37.49:0,37,153	0/0:13,0:13:26.37:0,26,109	1/1:1,11:12:24:385,24,0	0/0:14,0:14:23.04:0,23,118	0/0:7,0:7:15.04:0,15,312	0/0:25,0:25:70.04:0,70,1274	0/0:30,0:30:90.27:0,90,1741	0/0:18,0:18:31.96:0,32,164	0/0:12,0:12:25.42:0,25,105	0/0:13,0:13:26.15:0,26,109	0/0:23,0:23:31.51:0,32,106	1/1:19,0:19:50.26:495,50,0	0/0:38,0:38:99:0,111,2235	0/0:12,0:12:36.12:0,36,735
chr10	94392198	.	A	AT	9313.34	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=-13.330;DP=537;FS=5.476;HRun=8;HaplotypeScore=52.0231;InbreedingCoeff=0.8670;MQ=79.67;MQ0=1;MQRankSum=0.093;QD=26.01;ReadPosRankSum=2.696;VQSLOD=5.6729;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.02:0,51,467	1/1:0,10:10:30.09:346,30,0	0/1:16,0:15:13.03:13,0,98	0/1:10,0:11:2.16:2,0,44	1/1:3,26:29:77.97:834,78,0	1/1:1,19:20:51.15:589,51,0	1/1:1,11:12:24.07:277,24,0	0/0:32,0:32:72:0,72,646	1/1:2,21:23:60.17:682,60,0	1/1:3,30:34:93.08:1031,93,0	1/1:1,14:15:39.12:450,39,0	1/1:2,20:22:60.18:691,60,0	1/1:3,21:24:57.17:658,57,0	1/1:3,19:23:48.14:554,48,0	1/1:4,17:21:54.16:623,54,0	1/1:3,12:15:27.08:312,27,0	0/0:15,0:15:41.64:0,42,372	1/1:1,12:13:33.10:381,33,0	0/0:6,0:6:8.62:0,9,82	0/0:23,0:23:69.04:0,69,631	0/0:15,0:15:38.99:0,39,348	1/1:5,13:18:42.07:460,42,0	1/1:2,23:26:63.02:707,63,0	1/1:2,12:13:33.10:381,33,0	1/1:3,9:12:30.05:323,30,0	0/0:28,0:28:81.03:0,81,735	0/0:35,0:35:96.02:0,96,872	0/0:6,0:6:17.91:0,18,153
chr10	94394433	.	A	AT	17361.84	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=3.829;DP=765;FS=35.503;HRun=5;HaplotypeScore=107.6547;InbreedingCoeff=0.9996;MQ=69.57;MQ0=2;MQRankSum=-2.047;QD=33.13;ReadPosRankSum=2.805;VQSLOD=2.4567;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:36:93.30:1220,93,0	1/1:0,10:10:27.09:355,27,0	0/0:21,0:18:39.09:0,39,415	0/0:25,0:23:26.38:0,26,419	1/1:3,31:34:87.28:1137,87,0	1/1:5,16:21:39.13:513,39,0	1/1:1,21:22:51.17:671,51,0	0/0:28,0:27:60.13:0,60,636	1/1:5,28:33:78.25:1026,78,0	1/1:1,29:30:84.22:1069,84,0	1/1:2,17:19:48.11:612,48,0	1/1:1,29:30:75.24:986,75,0	1/1:4,32:36:88.17:1146,88,0	1/1:4,27:31:75.24:986,75,0	1/1:3,31:34:84.27:1105,84,0	1/1:0,28:28:81.26:1066,81,0	1/1:3,27:30:81.26:1066,81,0	1/1:4,14:18:42.07:516,42,0	0/0:32,0:32:90.19:0,90,944	0/0:35,0:35:99:0,102,1096	0/0:21,0:21:42.06:0,42,439	1/1:2,30:32:84.27:1100,84,0	1/1:3,23:26:63.06:798,63,0	1/1:1,22:22:63.10:805,63,0	1/1:1,30:31:90.29:1183,90,0	0/0:36,0:36:99:0,105,1115	0/0:31,0:31:87.15:0,87,919	0/0:12,0:11:33.08:0,33,355
chr10	94395779	.	AC	A	7169.94	PASS	AC=36;AF=0.667;AN=54;BaseQRankSum=5.403;DP=510;FS=3.148;HRun=9;HaplotypeScore=52.1301;InbreedingCoeff=0.9474;MQ=58.45;MQ0=7;MQRankSum=2.647;QD=21.66;ReadPosRankSum=4.745;VQSLOD=5.4083;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:34:31.71:0,32,204	1/1:0,4:4:9:82,9,0	./.	0/0:16,0:10:12.03:0,12,133	1/1:1,13:14:36.02:329,36,0	1/1:2,23:25:54.03:494,54,0	1/1:4,12:15:30.01:275,30,0	0/0:21,0:21:36.03:0,36,379	1/1:1,13:14:36.02:329,36,0	1/1:2,9:11:27:243,27,0	1/1:1,8:9:12:110,12,0	1/1:2,14:14:39.02:357,39,0	1/1:3,11:14:33.02:302,33,0	1/1:1,18:19:16.41:405,16,0	1/1:5,23:28:69.02:631,69,0	1/1:1,13:14:36.02:330,36,0	1/1:5,34:39:96.04:878,96,0	1/1:3,26:29:80.08:720,80,0	0/0:22,0:22:51.15:0,51,584	0/0:13,1:13:33.10:0,33,381	0/0:27,1:28:35.69:0,36,644	1/1:2,12:14:36.02:327,36,0	1/1:4,17:20:41.92:384,42,0	1/1:2,20:23:48.65:535,49,0	1/1:5,15:20:48.02:439,48,0	0/0:9,0:9:27.08:0,27,311	0/0:11,1:11:2.63:0,3,284	0/0:7,0:7:18.52:0,19,209
chr10	94396013	.	GGA	G	3625.52	PASS	AB=0.714;AC=33;AF=0.589;AN=56;BaseQRankSum=7.232;DP=260;FS=3.324;HRun=0;HaplotypeScore=35.8009;InbreedingCoeff=0.7916;MQ=69.11;MQ0=3;MQRankSum=0.570;QD=28.77;ReadPosRankSum=3.116;VQSLOD=4.0013;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.24:0,75,1268	1/1:1,1:1:5.99:66,6,0	0/0:5,0:3:3.01:0,3,53	0/0:13,0:9:8.07:0,8,40	1/1:0,8:8:14.88:147,15,0	1/1:2,4:6:12.01:157,12,0	1/1:1,8:9:18.06:272,18,0	0/0:15,0:13:21.19:0,21,603	1/1:0,8:8:6.02:91,6,0	1/1:1,4:5:12.01:157,12,0	1/1:0,3:3:9.03:136,9,0	1/1:1,6:7:18.06:272,18,0	1/1:4,4:8:24.01:312,24,0	1/1:0,5:5:3.01:45,3,0	1/1:1,5:6:13.54:221,14,0	1/1:2,6:8:9.03:136,9,0	0/0:18,0:18:51.13:0,51,816	0/1:3,2:5:7.95:123,0,8	0/0:4,0:3:9.02:0,9,133	0/0:10,0:10:15.14:0,15,442	0/0:15,0:15:42.12:0,42,670	1/1:1,11:12:27.09:407,27,0	1/1:1,17:18:36.12:544,36,0	1/1:0,5:5:9.03:136,9,0	1/1:2,9:11:27.09:404,27,0	0/0:5,0:4:12.02:0,12,148	0/0:14,0:14:39.11:0,39,641	0/0:9,0:9:24.04:0,24,349
chr10	94396014	.	GA	G	1480.34	PASS	AB=0.900;AC=34;AF=0.607;AN=56;BaseQRankSum=10.498;DP=260;FS=5.083;HRun=1;HaplotypeScore=38.9119;InbreedingCoeff=0.7409;MQ=69.30;MQ0=3;MQRankSum=0.298;QD=10.97;ReadPosRankSum=3.164;VQSLOD=1.8947;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.23:0,75,1009	1/1:2,0:1:5.93:40,6,0	0/0:4,1:3:3.01:0,3,42	0/1:11,0:8:3.04:3,0,16	1/1:8,0:8:14.77:95,15,0	1/1:5,0:5:11.74:73,12,0	1/1:9,0:9:17.75:116,18,0	0/0:16,0:14:25.11:0,25,491	1/1:8,0:8:5.91:39,6,0	1/1:4,1:5:11.84:79,12,0	1/1:3,0:3:8.87:58,9,0	1/1:6,1:7:17.76:117,18,0	1/1:7,1:8:23.73:177,24,0	1/1:5,0:5:2.98:21,3,0	1/1:7,0:7:14.57:125,15,0	1/1:6,1:7:8.88:58,9,0	0/0:19,0:19:51.11:0,51,653	0/1:3,1:4:24.44:47,0,24	0/0:4,0:3:9.02:0,9,111	0/0:10,0:10:14.12:0,14,357	0/0:15,0:15:42.10:0,42,535	1/1:11,1:12:26.60:173,27,0	1/1:17,1:18:35.47:232,35,0	1/1:5,0:5:8.87:58,9,0	1/1:9,2:11:26.63:175,27,0	0/0:5,0:4:12.01:0,12,122	0/0:15,0:15:42.09:0,42,527	0/0:10,0:10:27.03:0,27,313
chr10	94396097	.	TA	T	364.77	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=1.853;DP=377;FS=3.565;HRun=7;HaplotypeScore=52.1162;InbreedingCoeff=0.6772;MQ=66.52;MQ0=0;MQRankSum=-0.487;QD=14.03;ReadPosRankSum=2.560;VQSLOD=3.0223;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.19:0,66,815	0/0:7,0:7:18.03:0,18,211	0/0:17,0:14:32.87:0,33,383	0/0:8,0:8:9.50:0,10,114	0/0:25,0:25:66.21:0,66,819	0/0:7,0:7:18.06:0,18,226	0/1:6,0:6:2.21:2,0,170	0/0:13,0:13:30.09:0,30,366	0/0:12,0:12:36.10:0,36,440	0/0:15,0:15:42.10:0,42,475	0/0:19,0:19:54.16:0,54,666	0/0:11,0:11:30.07:0,30,351	0/0:10,0:10:30.08:0,30,364	0/0:3,0:3:9.02:0,9,100	0/0:11,0:11:33.08:0,33,389	0/0:12,0:12:33.11:0,33,415	1/1:2,18:20:45.10:459,45,0	0/0:15,0:15:42.13:0,42,527	0/0:7,0:7:21.07:0,21,264	0/0:19,0:19:54.16:0,54,666	0/0:14,0:14:39.11:0,39,478	0/0:12,0:12:33.11:0,33,415	0/0:15,0:15:42.12:0,42,515	0/0:11,0:11:30.97:0,31,367	0/0:20,0:20:60.19:0,60,755	0/0:18,0:18:54.17:0,54,679	0/0:13,0:13:33.11:0,33,415	0/0:14,0:14:42.11:0,42,504
chr10	94396725	.	G	GAA	2346.06	PASS	AB=0.805;AC=45;AF=0.804;AN=56;BaseQRankSum=-3.326;DP=257;FS=0.000;HRun=12;HaplotypeScore=108.5932;InbreedingCoeff=0.2163;MQ=54.30;MQ0=3;MQRankSum=-1.230;QD=10.62;ReadPosRankSum=0.438;VQSLOD=2.1389;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:24:45.93:201,46,0	1/1:4,3:6:3.48:43,3,0	0/0:21,0:12:13.52:0,14,111	0/0:15,0:10:11.05:0,11,99	1/1:4,6:11:23.62:201,24,0	1/1:1,3:4:5.98:62,6,0	1/1:2,11:13:16.60:184,17,0	1/1:8,0:8:2.96:20,3,0	0/1:6,4:10:13.78:95,0,14	0/1:10,2:10:1.55:140,0,2	1/1:5,1:6:10.17:75,10,0	1/1:2,0:6:7.21:77,7,0	0/1:6,3:9:8.54:106,0,9	0/1:7,4:9:16.03:35,0,16	1/1:5,4:11:21.40:215,21,0	1/1:5,0:5:8.90:60,9,0	1/1:7,5:12:17.37:169,17,0	1/1:5,0:5:12:131,12,0	1/1:3,0:4:7.47:33,7,0	1/1:4,0:6:10.90:56,11,0	0/1:5,0:6:9.01:9,0,20	0/1:2,1:3:9.44:54,0,9	1/1:4,1:7:17.87:135,18,0	1/1:1,4:5:12:145,12,0	1/1:7,3:9:14.15:122,14,0	1/1:4,0:11:21.99:85,22,0	1/1:5,0:8:7.97:39,8,0	0/1:2,0:2:0:0,0,0
chr10	94397362	.	AGG	A	8370.07	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-3.156;DP=707;FS=5.797;HRun=5;HaplotypeScore=116.3951;InbreedingCoeff=0.9311;MQ=76.71;MQ0=3;MQRankSum=-3.324;QD=32.95;ReadPosRankSum=3.933;VQSLOD=3.8304;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:7.78:8,0,71	1/1:2,11:12:24.08:336,24,0	0/0:29,0:25:71.98:0,72,1228	0/0:35,0:33:89.15:0,89,1436	1/1:1,23:21:45.15:629,45,0	0/0:19,0:19:54.17:0,54,943	0/0:21,0:21:57.20:0,57,1033	0/0:33,0:33:84.29:0,84,1517	1/1:2,27:29:78.26:1091,78,0	1/1:1,31:30:84.28:1172,84,0	1/1:4,24:27:75.24:1020,75,0	0/0:23,0:23:60.21:0,60,1085	0/0:26,0:26:78.27:0,78,1420	0/0:27,0:27:75.26:0,75,1374	1/1:1,29:29:78.26:1092,78,0	1/1:0,24:24:69.23:966,69,0	0/0:25,0:25:58.54:0,59,1118	1/1:0,29:29:75.25:1050,75,0	0/0:20,0:20:54.18:0,54,957	0/0:23,0:23:69.22:0,69,1230	0/0:15,0:15:45.14:0,45,770	0/0:21,0:21:57.19:0,57,1021	0/0:27,0:27:69.24:0,69,1222	0/0:26,0:26:74.84:0,75,1366	1/1:1,26:27:72.24:1008,72,0	0/0:34,0:34:87.30:0,87,1580	0/0:28,0:27:81.28:0,81,1484	0/0:20,0:20:57.20:0,57,1045
chr10	94397366	.	G	GTTTTTTT	542.62	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=4.095;DP=690;FS=0.818;HRun=0;HaplotypeScore=212.1206;InbreedingCoeff=0.6367;MQ=76.68;MQ0=3;MQRankSum=-1.865;QD=12.92;ReadPosRankSum=-3.333;VQSLOD=2.3655;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:16:18.06:591,18,0	0/0:11,0:10:22.88:0,23,349	0/0:30,0:24:65.22:0,65,1388	0/0:35,0:33:75.39:0,75,1211	0/0:23,0:20:42.23:0,42,744	0/0:20,0:20:60.03:0,60,1145	0/0:19,0:19:57.12:0,57,1115	0/0:32,0:32:87.22:0,87,1774	0/0:27,0:27:73.01:0,73,1299	0/0:31,0:29:19.53:0,20,1194	0/0:25,0:26:38.99:0,39,1103	0/0:21,0:21:60.05:0,60,1367	0/0:27,0:27:81.20:0,81,1829	0/0:25,0:25:75.26:0,75,1832	0/0:31,0:30:73.90:0,74,1180	0/0:28,0:28:78.21:0,78,1295	0/1:26,0:26:54.68:55,0,501	0/0:30,0:30:75.23:0,75,1241	0/0:18,0:18:54.15:0,54,1231	0/0:22,0:22:66.18:0,66,1604	0/0:14,0:14:42.13:0,42,1053	0/0:20,0:20:57.11:0,57,1307	0/0:25,0:25:69.11:0,69,1419	0/0:28,0:28:81.17:0,81,1915	0/0:27,0:27:72.25:0,72,1259	0/0:30,0:30:90.30:0,90,2285	0/0:28,0:27:81.26:0,81,1951	0/0:19,0:19:57.20:0,57,1488
chr10	94397379	.	TG	T	81.83	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.301;DP=682;FS=5.324;HRun=1;HaplotypeScore=129.2269;InbreedingCoeff=0.9876;MQ=70.28;MQ0=6;MQRankSum=-3.875;QD=4.09;ReadPosRankSum=-1.184;VQSLOD=-0.0690;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:35.48:0,35,492	0/0:8,0:7:21.07:0,21,335	0/0:28,0:22:58.79:0,59,816	0/0:31,0:23:29.35:0,29,445	0/0:22,0:19:54.17:0,54,825	0/0:24,0:24:69.13:0,69,978	0/0:13,0:13:39.11:0,39,586	0/0:28,0:28:84.28:0,84,1290	0/0:30,0:29:78.25:0,78,1209	0/0:29,0:26:78.27:0,78,1235	0/0:24,0:23:69.24:0,69,1101	0/0:20,0:20:60.19:0,60,908	0/0:24,0:24:72.22:0,72,1117	0/0:26,0:26:78.18:0,78,1169	0/0:27,0:26:75.26:0,75,1187	0/0:28,0:28:81.24:0,81,1229	1/1:10,10:19:18.34:173,18,0	0/0:31,0:31:84.13:0,84,1228	0/0:16,0:16:48.13:0,48,693	0/0:25,0:25:75.19:0,75,1104	0/0:17,0:17:51.14:0,51,762	0/0:23,0:23:65.97:0,66,939	0/0:24,0:24:70.95:0,71,1026	0/0:30,0:30:90.17:0,90,1332	0/0:29,0:29:81.26:0,81,1262	0/0:34,0:34:99:0,102,1523	0/0:33,0:32:96.33:0,96,1474	0/0:19,0:19:57.19:0,57,877
chr10	94397382	.	TGTTG	T	373.73	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.336;DP=680;FS=3.060;HRun=0;HaplotypeScore=165.6542;InbreedingCoeff=0.8547;MQ=67.56;MQ0=7;MQRankSum=-5.220;QD=18.69;ReadPosRankSum=-1.021;VQSLOD=3.3806;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:36.04:0,36,809	0/0:8,0:7:21.07:0,21,597	0/0:27,0:22:51.19:0,51,1015	0/0:31,0:22:3.37:0,3,526	0/0:25,0:22:63.15:0,63,1516	0/0:25,0:25:75.18:0,75,1472	0/0:12,0:12:36.12:0,36,899	0/0:28,0:28:81.25:0,81,1874	0/0:28,0:27:75.24:0,75,2027	0/0:29,0:27:81.27:0,81,2146	0/0:24,0:23:69.24:0,69,1944	0/0:21,0:21:63.21:0,63,1545	0/0:25,0:25:74.28:0,74,1867	0/0:26,0:26:78.21:0,78,1864	0/0:27,0:26:75.24:0,75,2041	0/0:26,0:26:75.24:0,75,2000	1/1:14,5:19:36.98:468,37,0	0/0:33,0:33:90.22:0,90,2189	0/0:17,0:16:48.16:0,48,1165	0/0:27,0:27:78.27:0,78,1999	0/0:17,0:17:51.17:0,51,1313	0/0:22,0:22:66.19:0,66,1517	0/0:23,0:23:69.18:0,69,1604	0/0:31,0:31:93.23:0,93,2165	0/0:29,0:29:81.21:0,81,2175	0/0:33,0:33:96.80:0,97,2508	0/0:32,0:31:96.33:0,96,2261	0/0:17,0:17:51.08:0,51,1176
chr10	94397385	.	TG	T	284.21	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.304;DP=670;FS=3.037;HRun=1;HaplotypeScore=122.3041;InbreedingCoeff=0.8885;MQ=64.02;MQ0=8;MQRankSum=-4.752;QD=14.96;ReadPosRankSum=-0.318;VQSLOD=3.3165;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:36.04:0,36,493	0/0:8,0:7:21.07:0,21,335	0/0:27,0:21:50:0,50,676	0/0:32,0:20:5.21:0,5,387	0/0:26,0:23:66.14:0,66,971	0/0:23,0:23:69.10:0,69,944	0/0:12,0:12:36.06:0,36,522	0/0:25,0:25:72.18:0,72,1082	0/0:26,0:25:72.25:0,72,1143	0/0:30,0:28:81.26:0,81,1246	0/0:25,0:24:72.25:0,72,1143	0/0:21,0:21:63.21:0,63,973	0/0:25,0:25:74.26:0,74,1115	0/0:25,0:25:75.15:0,75,1115	0/0:26,0:25:72.25:0,72,1145	0/0:27,0:27:75.24:0,75,1160	1/1:9,10:18:47.68:379,48,0	0/0:32,0:32:87.22:0,87,1309	0/0:17,0:16:48.14:0,48,700	0/0:29,0:29:84.27:0,84,1285	0/0:16,0:16:48.16:0,48,756	0/0:23,0:23:66.14:0,66,976	0/0:23,0:23:69.15:0,69,1032	0/0:30,0:30:84.95:0,85,1277	0/0:29,0:29:81.21:0,81,1255	0/0:32,0:32:93.79:0,94,1461	0/0:32,0:32:93.25:0,93,1370	0/0:13,0:13:39.13:0,39,623
chr10	94397420	.	T	TGTG	624.81	PASS	AB=0.595;AC=1;AF=0.018;AN=56;BaseQRankSum=3.152;DP=607;FS=0.000;HRun=0;HaplotypeScore=118.0138;InbreedingCoeff=-0.0197;MQ=69.29;MQ0=7;MQRankSum=-4.226;QD=28.40;ReadPosRankSum=-1.356;VQSLOD=3.1042;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:33.11:0,33,520	0/0:4,0:4:12.04:0,12,199	0/0:36,0:25:52.05:0,52,694	0/0:32,0:21:20.35:0,20,720	0/0:18,0:17:51.17:0,51,838	0/0:27,0:27:81.28:0,81,1354	0/0:12,0:12:36.12:0,36,590	0/0:26,0:26:72.24:0,72,1151	0/0:26,0:26:66.23:0,66,1114	0/0:23,0:23:69.23:0,69,1151	0/0:18,0:18:51.17:0,51,856	0/0:19,0:19:57.19:0,57,926	0/0:19,0:19:54.18:0,54,894	0/0:23,0:23:66.07:0,66,1020	0/0:18,0:17:45.15:0,45,754	0/0:22,0:22:60.20:0,60,1010	0/1:7,14:22:47.09:699,0,47	0/0:32,0:32:84.76:0,85,1385	0/0:10,0:10:30.10:0,30,494	0/0:26,0:26:72.25:0,72,1203	0/0:14,0:14:42.14:0,42,697	0/0:23,0:23:63.21:0,63,1051	0/0:19,0:19:54.18:0,54,876	0/0:32,0:32:93.29:0,93,1456	0/0:26,0:26:72.23:0,72,1154	0/0:32,0:32:87.30:0,87,1449	0/0:26,0:26:78.27:0,78,1316	0/0:6,0:6:18.06:0,18,307
chr10	94397561	.	CT	C	291.89	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.923;DP=576;FS=1.106;HRun=6;HaplotypeScore=81.5316;InbreedingCoeff=0.9681;MQ=77.61;MQ0=0;MQRankSum=0.323;QD=16.22;ReadPosRankSum=0.662;VQSLOD=3.4741;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.26:0,93,1190	0/0:13,0:13:39.13:0,39,513	0/0:12,0:12:25.81:0,26,362	0/0:18,0:18:39.08:0,39,480	0/0:21,0:21:54.16:0,54,685	0/0:18,0:18:54.13:0,54,690	0/0:23,0:23:63.19:0,63,803	0/0:25,0:25:66.20:0,66,843	0/0:19,0:19:51.09:0,51,633	0/0:23,0:23:63.20:0,63,829	0/0:28,0:28:75.24:0,75,986	0/0:15,0:15:39.09:0,39,495	0/0:21,0:21:54.06:0,54,653	0/0:17,0:17:48.05:0,48,571	0/0:24,0:24:66.17:0,66,849	0/0:21,0:21:54.01:0,54,607	1/1:5,13:18:36.09:387,36,0	0/0:30,0:30:84.27:0,84,1103	0/0:11,0:11:30.10:0,30,395	0/0:26,0:26:75.24:0,75,974	0/0:22,0:22:54.18:0,54,711	0/0:15,0:15:36.08:0,36,455	0/0:29,0:29:75.24:0,75,987	0/0:18,0:18:48.16:0,48,631	0/0:16,0:16:48.16:0,48,631	0/0:21,0:21:60.19:0,60,778	0/0:35,0:35:99:0,105,1365	0/0:4,0:4:12.04:0,12,158
chr10	94397669	.	T	TG	10265.10	PASS	AC=34;AF=0.630;AN=54;BaseQRankSum=16.508;DP=503;FS=37.555;HRun=0;HaplotypeScore=153.2072;InbreedingCoeff=0.9694;MQ=86.25;MQ0=0;MQRankSum=-15.408;QD=36.02;ReadPosRankSum=4.253;VQSLOD=1.8881;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:81.21:0,81,1076	1/1:0,8:7:21.07:334,21,0	0/0:30,0:30:80.68:0,81,981	0/0:14,0:14:11.33:0,11,366	1/1:3,6:8:12.04:191,12,0	1/1:2,20:22:51.17:813,51,0	1/1:1,30:31:75.26:1196,75,0	0/0:19,0:19:54.17:0,54,727	1/1:1,23:24:54.18:859,54,0	1/1:0,10:10:27.09:430,27,0	./.	1/1:0,22:22:57.19:908,57,0	1/1:1,23:24:66.22:1050,66,0	1/1:2,15:17:39.13:621,39,0	1/1:0,20:20:54.18:861,54,0	1/1:1,18:19:54.18:861,54,0	1/1:4,0:17:42:399,42,0	1/1:2,10:12:33.09:502,33,0	0/0:13,0:13:39.13:0,39,544	0/0:11,0:11:18.06:0,18,252	0/0:35,0:35:99:0,99,1323	1/1:2,8:10:15.05:238,15,0	1/1:1,6:7:6.01:95,6,0	1/1:0,18:18:29.69:477,30,0	1/1:3,11:14:27.09:430,27,0	0/0:18,0:18:48.15:0,48,657	0/0:31,0:31:93.31:0,93,1298	0/0:11,0:11:33.10:0,33,445
chr10	94397769	.	A	AGGTT	1318.26	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.711;DP=618;FS=0.000;HRun=0;HaplotypeScore=121.6729;InbreedingCoeff=0.8971;MQ=53.96;MQ0=3;MQRankSum=-0.169;QD=57.32;ReadPosRankSum=1.553;VQSLOD=5.1978;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,111,1986	0/0:8,0:8:21.07:0,21,382	0/0:26,0:10:21.03:0,21,314	0/0:26,0:11:27.09:0,27,453	0/0:16,0:16:39.13:0,39,705	0/0:15,0:15:42.13:0,42,733	0/0:28,0:28:78.25:0,78,1385	0/0:24,0:22:54.18:0,54,968	0/0:24,0:24:63.17:0,63,1104	0/0:26,0:26:72.24:0,72,1282	0/0:15,0:15:33.11:0,33,600	0/0:28,0:28:72.20:0,72,1273	0/0:21,0:21:60.21:0,60,1090	0/0:21,0:21:51.16:0,51,897	0/0:26,0:26:72.23:0,72,1273	0/0:20,0:20:57.17:0,57,997	1/1:3,20:23:57.15:1413,57,0	0/0:17,0:17:45.13:0,45,773	0/0:20,0:20:45.14:0,45,778	0/0:16,0:16:45.15:0,45,819	0/0:33,0:32:83.86:0,84,1440	0/0:23,0:23:57.20:0,57,1036	0/0:19,0:19:45.15:0,45,818	0/0:28,0:28:66.23:0,66,1199	0/0:14,0:14:30.09:0,30,517	0/0:28,0:28:75.26:0,75,1363	0/0:29,0:29:78.25:0,78,1388	0/0:3,0:3:6.02:0,6,109
chr10	94398043	.	TGGGTC	T	490.95	PASS	AB=0.873;AC=6;AF=0.273;AN=22;BaseQRankSum=-1.809;DP=206;FS=46.000;HRun=0;HaplotypeScore=125.1286;InbreedingCoeff=-0.4207;MQ=41.39;MQ0=7;MQRankSum=-0.677;QD=4.46;ReadPosRankSum=-1.279;VQSLOD=0.7275;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:52.34:0,52,523	./.	0/0:9,0:2:6.02:0,6,98	0/0:8,0:2:2.96:0,3,53	./.	./.	./.	0/0:26,0:26:14.13:0,14,555	./.	./.	./.	./.	./.	./.	./.	./.	0/1:18,1:19:99:240,0,252	./.	0/1:20,0:22:56.30:56,0,453	0/0:21,1:22:29.92:0,30,501	0/1:4,4:8:12.09:12,0,95	./.	./.	./.	./.	0/1:24,1:24:53.13:53,0,481	0/1:24,0:25:99:196,0,492	0/1:7,0:7:28.72:29,0,169
chr10	94398487	.	C	CT	9985.36	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=14.534;DP=618;FS=6.157;HRun=7;HaplotypeScore=85.6829;InbreedingCoeff=0.9844;MQ=83.52;MQ0=0;MQRankSum=-5.297;QD=28.37;ReadPosRankSum=3.203;VQSLOD=5.4283;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.09:0,66,632	1/1:0,2:2:6.02:72,6,0	0/0:23,0:23:54.05:0,54,512	0/0:21,0:21:42.58:0,43,409	1/1:4,19:23:48.06:546,48,0	1/1:4,35:41:99:1152,99,0	1/1:3,16:19:42.13:507,42,0	0/0:23,0:23:60.08:0,60,575	1/1:3,20:23:54.17:652,54,0	1/1:3,27:30:81.23:965,81,0	1/1:3,13:16:24.07:290,24,0	1/1:3,21:24:57.17:688,57,0	1/1:3,27:30:75.23:903,75,0	1/1:3,21:24:56.07:686,56,0	1/1:3,16:20:41.18:535,41,0	1/1:2,22:24:63.19:761,63,0	0/0:15,0:15:41.61:0,42,377	1/1:2,10:12:28.99:360,29,0	0/0:28,0:28:81.12:0,81,778	0/0:20,0:20:53.29:0,53,520	0/0:24,0:24:66.05:0,66,628	1/1:0,17:17:48.11:563,48,0	1/1:1,10:11:30.09:362,30,0	1/1:2,14:16:39.12:471,39,0	1/1:2,18:20:39.12:471,39,0	0/0:28,0:28:69.07:0,69,659	0/0:43,0:42:99:0,117,1118	0/0:16,0:16:27.04:0,27,261
chr10	94399212	.	CG	C	1750.77	PASS	AB=0.813;AC=11;AF=0.196;AN=56;BaseQRankSum=-10.021;DP=563;FS=1.014;HRun=10;HaplotypeScore=121.8859;InbreedingCoeff=0.8119;MQ=80.29;MQ0=0;MQRankSum=2.417;QD=13.57;ReadPosRankSum=3.560;VQSLOD=3.2450;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:32:33.97:0,34,271	0/0:4,0:9:9.88:0,10,51	0/1:20,6:25:51.37:51,0,292	0/0:22,2:23:13.04:0,13,322	0/0:11,0:17:11.32:0,11,86	0/0:19,0:23:8.67:0,9,53	0/0:13,0:26:34.80:0,35,226	0/0:8,0:18:31.60:0,32,174	0/0:14,0:27:31.43:0,31,166	0/0:10,0:17:11.74:0,12,77	0/0:15,0:19:23.31:0,23,152	0/0:23,0:30:47.52:0,48,356	0/0:10,0:20:23.55:0,24,166	0/0:8,0:17:35.11:0,35,238	0/0:8,0:21:32.15:0,32,203	0/0:11,0:17:17.39:0,17,98	0/0:11,0:17:23.31:0,23,136	0/0:5,0:13:23.02:0,23,124	1/1:3,12:15:38.99:338,39,0	1/1:9,18:27:54.86:470,55,0	1/1:6,15:22:38.02:318,38,0	0/0:8,0:13:11.52:0,12,69	0/0:12,0:23:19.77:0,20,125	0/0:12,0:34:26.82:0,27,263	0/0:11,0:11:5.96:0,6,44	1/1:3,15:18:47.96:412,48,0	1/1:4,17:20:38.90:338,39,0	0/0:3,0:6:14.54:0,15,87
chr10	94399750	.	A	AT	1652.59	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.866;DP=520;FS=6.488;HRun=6;HaplotypeScore=48.8958;InbreedingCoeff=0.8765;MQ=69.40;MQ0=0;MQRankSum=-0.824;QD=30.05;ReadPosRankSum=0.494;VQSLOD=4.1000;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:69.22:868,69,0	0/0:12,0:12:36.08:0,36,367	0/0:10,0:10:2.51:0,3,146	0/0:9,0:8:18.01:0,18,174	0/0:37,0:37:93.19:0,93,942	0/0:17,0:17:51.10:0,51,513	0/0:4,0:4:9.02:0,9,92	0/0:32,0:32:90.20:0,90,917	0/0:19,0:19:57.13:0,57,581	0/0:29,0:29:78.16:0,78,791	0/0:21,0:21:54.12:0,54,551	0/0:13,0:13:36.08:0,36,367	0/0:16,0:16:45.08:0,45,452	0/0:12,0:12:33.07:0,33,337	0/0:20,0:20:60.12:0,60,605	0/0:14,0:14:42.10:0,42,428	1/1:2,25:27:72.23:906,72,0	0/0:23,0:23:66.15:0,66,673	0/0:19,0:19:48.10:0,48,490	0/0:25,0:25:72.16:0,72,734	0/0:7,0:7:18.04:0,18,183	0/0:9,0:9:21.05:0,21,214	0/0:12,0:12:30.05:0,30,299	0/0:11,0:11:33.07:0,33,336	0/0:22,0:22:60.14:0,60,612	0/0:19,0:19:48.10:0,48,490	0/0:30,0:30:72.16:0,72,734	0/0:23,0:23:60.13:0,60,612
chr10	94401294	.	AC	A	2539.01	PASS	AB=0.921;AC=47;AF=0.839;AN=56;BaseQRankSum=-1.475;DP=384;FS=1.003;HRun=11;HaplotypeScore=55.8897;InbreedingCoeff=-0.0133;MQ=80.50;MQ0=0;MQRankSum=-2.828;QD=6.72;ReadPosRankSum=3.234;VQSLOD=1.4601;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:9.38:9,0,95	0/0:5,1:6:0:0,0,0	0/1:18,2:19:43.38:43,0,101	0/1:13,0:12:23.42:23,0,69	1/1:7,6:13:7.24:68,7,0	1/1:7,3:10:8.90:73,9,0	1/1:10,7:17:17.93:144,18,0	1/1:23,0:23:10.44:71,10,0	1/1:8,1:9:7.74:49,8,0	1/1:9,2:11:8.75:63,9,0	1/1:9,4:13:15.19:108,15,0	1/1:6,1:7:11.86:87,12,0	1/1:5,1:7:16.04:109,16,0	1/1:9,7:16:13.99:104,14,0	0/1:11,2:13:9.64:122,0,10	0/1:15,1:16:9.92:59,0,10	1/1:22,6:28:34.53:256,35,0	1/1:9,2:12:24.49:174,24,0	1/1:6,1:7:8.89:65,9,0	1/1:12,5:18:13.67:104,14,0	0/1:14,7:22:13.67:161,0,14	1/1:5,2:7:2.99:25,3,0	0/1:11,0:11:0.05:0,0,0	1/1:13,9:24:32.62:233,33,0	1/1:11,0:13:18.81:114,19,0	1/1:5,5:11:11.87:101,12,0	1/1:13,7:21:37.48:273,37,0	1/1:0,2:2:3:25,3,0
chr10	94401840	.	GAAGA	G	531.93	PASS	AB=0.944;AC=7;AF=0.140;AN=50;BaseQRankSum=-4.681;DP=377;FS=0.000;HRun=0;HaplotypeScore=131.6732;InbreedingCoeff=0.4700;MQ=54.10;MQ0=3;MQRankSum=3.429;QD=7.60;ReadPosRankSum=-0.788;VQSLOD=2.6564;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:16.54:0,17,149	0/0:4,0:4:4.99:0,5,17	./.	./.	0/0:19,0:19:4.87:0,5,17	0/0:11,0:11:10.68:0,11,62	0/0:8,0:8:2.37:0,2,8	./.	0/0:4,0:4:2.50:0,2,9	0/0:13,0:13:13.50:0,14,89	0/0:14,0:14:11.01:0,11,87	0/0:12,0:12:2.50:0,2,9	0/0:13,0:13:16:0,16,98	0/0:14,0:13:8.06:0,8,53	0/0:14,0:14:5.46:0,5,29	0/0:9,0:9:2.50:0,2,9	0/0:18,0:18:14.63:0,15,126	0/0:8,0:8:7.96:0,8,37	0/0:15,0:14:12.03:0,12,235	0/0:17,0:17:18.01:0,18,280	0/1:16,1:16:9.81:92,0,10	0/0:15,0:15:16:0,16,103	0/0:12,0:12:11.15:0,11,70	0/0:11,0:11:2.50:0,2,9	0/0:14,0:14:11.19:0,11,85	1/1:15,2:17:6.02:89,6,0	1/1:23,7:30:29.88:388,30,0	1/1:4,2:6:6.02:89,6,0
chr10	94401869	.	A	AG	1602.10	PASS	AB=1.000;AC=30;AF=0.556;AN=54;BaseQRankSum=11.464;DP=249;FS=87.783;HRun=0;HaplotypeScore=91.6009;InbreedingCoeff=0.6937;MQ=40.60;MQ0=10;MQRankSum=-7.296;QD=12.92;ReadPosRankSum=3.564;VQSLOD=0.7962;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:9:26.07:0,26,319	0/1:4,0:4:4.72:36,0,5	./.	0/0:1,0:1:2.99:0,3,24	0/1:11,0:11:2.84:72,0,3	1/1:8,2:10:12.60:165,13,0	1/1:5,0:4:11.77:72,12,0	0/0:21,0:14:39.07:0,39,501	1/1:3,0:3:8.83:54,9,0	1/1:9,2:11:17.21:187,17,0	1/1:8,2:10:10.82:137,11,0	1/1:6,0:6:8.98:65,9,0	1/1:5,2:7:20.59:139,21,0	1/1:8,2:9:26.41:172,26,0	1/1:4,1:5:14.73:97,15,0	1/1:4,0:4:11.80:75,12,0	0/0:15,0:15:45.11:0,45,594	0/1:6,0:6:17.74:18,0,60	0/0:10,0:9:27.04:0,27,341	0/0:16,0:16:48.15:0,48,656	0/0:11,0:9:26.94:0,27,306	1/1:9,2:11:31.80:192,32,0	1/1:4,3:7:17.71:131,18,0	0/1:5,0:5:4.23:4,0,46	1/1:6,3:9:26.66:189,27,0	0/0:11,0:10:29.98:0,30,368	0/0:23,0:23:65.71:0,66,709	0/0:4,0:4:11.92:0,12,120
chr10	94401871	.	GAA	G	3704.91	PASS	AB=0.845;AC=32;AF=0.593;AN=54;BaseQRankSum=9.297;DP=244;FS=78.039;HRun=3;HaplotypeScore=88.4815;InbreedingCoeff=0.7635;MQ=40.02;MQ0=10;MQRankSum=-6.782;QD=30.87;ReadPosRankSum=3.397;VQSLOD=-0.0136;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:10:27:0,27,412	1/1:0,3:3:9.03:121,9,0	./.	0/0:1,0:1:3.01:0,3,43	1/1:2,8:10:23.99:292,24,0	1/1:5,4:9:21.54:284,22,0	1/1:1,4:4:12.04:168,12,0	0/0:22,0:15:42.13:0,42,579	1/1:0,3:3:9.03:126,9,0	1/1:3,8:11:26.59:345,27,0	1/1:2,7:9:22.01:291,22,0	1/1:2,4:6:17.99:218,18,0	1/1:2,5:7:20.77:242,21,0	1/1:3,7:9:24.54:325,25,0	1/1:1,4:5:15.05:199,15,0	1/1:0,4:4:12.04:168,12,0	0/0:15,0:15:38.81:0,39,358	0/1:5,1:6:33.38:33,0,84	0/0:9,0:8:24.08:0,24,403	0/0:16,0:16:48.16:0,48,790	0/0:11,0:9:19.10:0,19,270	1/1:2,9:11:28.03:369,28,0	1/1:4,3:7:16.60:192,17,0	0/1:4,1:5:33.94:34,0,55	1/1:3,6:9:24.38:299,24,0	0/0:11,0:10:19.17:0,19,280	0/0:22,0:22:34.84:0,35,556	0/0:4,0:4:4.35:0,4,83
chr10	94401891	.	G	GA	101.26	PASS	AB=0.800;AC=2;AF=0.037;AN=54;BaseQRankSum=-0.783;DP=306;FS=16.647;HRun=3;HaplotypeScore=131.8974;InbreedingCoeff=-0.0390;MQ=38.00;MQ0=15;MQRankSum=-1.677;QD=6.33;ReadPosRankSum=1.646;VQSLOD=-0.2816;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:3,6:8:19.58:175,0,20	0/0:4,0:4:12.04:0,12,143	./.	0/0:17,0:1:3.01:0,3,36	0/0:12,0:12:20.53:0,21,205	0/0:7,0:7:21.06:0,21,253	0/0:8,0:7:14.53:0,15,151	0/0:31,0:25:69.21:0,69,826	0/0:3,0:3:6.02:0,6,71	0/0:15,0:15:43.60:0,44,455	0/0:16,0:16:44.11:0,44,482	0/0:6,0:6:18.05:0,18,215	0/0:13,0:13:38.60:0,39,435	0/0:15,0:14:35.08:0,35,369	0/0:6,0:6:14.02:0,14,126	0/0:6,0:6:14.53:0,15,153	0/1:7,0:7:2.23:2,0,32	0/0:5,0:5:9.91:0,10,109	0/0:16,0:14:42.13:0,42,503	0/0:17,0:17:47.09:0,47,533	0/0:9,0:7:20.85:0,21,207	0/0:11,0:11:33.10:0,33,391	0/0:9,0:9:23.56:0,24,259	0/0:10,0:10:24.95:0,25,277	0/0:9,0:9:26.57:0,27,294	0/0:7,0:6:17.86:0,18,182	0/0:24,0:24:56.39:0,56,522	0/0:7,0:7:20.87:0,21,212
chr10	94401895	.	G	GA	274.20	PASS	AB=0.773;AC=2;AF=0.036;AN=56;BaseQRankSum=-0.220;DP=307;FS=21.807;HRun=3;HaplotypeScore=125.1981;InbreedingCoeff=-0.0378;MQ=40.84;MQ0=15;MQRankSum=-1.704;QD=18.28;ReadPosRankSum=-0.594;VQSLOD=2.1147;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:8:18.40:176,0,18	0/0:4,0:4:11.52:0,12,117	0/0:12,0:2:5.75:0,6,47	0/0:19,0:3:6.02:0,6,71	0/0:11,0:11:17.54:0,18,182	0/0:7,0:7:20.55:0,21,223	0/0:7,0:6:11.52:0,12,117	0/0:32,0:26:69.21:0,69,827	0/0:2,0:2:5.50:0,6,45	0/0:15,0:15:31.22:0,31,380	0/0:16,0:16:38.09:0,38,412	0/0:6,0:6:17.54:0,18,189	0/0:13,0:13:35.59:0,36,390	0/0:13,0:12:30.09:0,30,352	0/0:5,0:5:9.03:0,9,108	0/0:5,0:5:12.04:0,12,143	0/1:1,5:6:17.53:187,0,18	0/0:5,0:5:10.57:0,11,101	0/0:16,0:14:42.13:0,42,503	0/0:17,0:17:50.16:0,50,571	0/0:9,0:7:20.82:0,21,206	0/0:11,0:11:31.56:0,32,314	0/0:9,0:9:21.06:0,21,245	0/0:10,0:10:23.98:0,24,254	0/0:9,0:9:23.55:0,24,249	0/0:8,0:7:20.85:0,21,205	0/0:24,0:24:50.37:0,50,451	0/0:7,0:7:20.87:0,21,212
chr10	94401913	.	A	AAG	3432.89	PASS	AB=0.654;AC=29;AF=0.537;AN=54;BaseQRankSum=9.245;DP=326;FS=31.433;HRun=0;HaplotypeScore=113.7007;InbreedingCoeff=0.6503;MQ=43.42;MQ0=14;MQRankSum=-9.197;QD=29.09;ReadPosRankSum=5.368;VQSLOD=2.7418;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:1.55:0,2,4	1/1:0,2:2:6.02:103,6,0	0/0:39,0:7:14.17:0,14,164	0/0:39,0:6:7.30:0,7,67	1/1:6,4:10:9.03:155,9,0	0/1:4,3:7:0.15:143,0,0	1/1:1,5:5:9.03:155,9,0	0/0:34,0:33:66.20:0,66,863	./.	1/1:6,9:15:27.07:451,27,0	1/1:4,8:12:24.08:411,24,0	1/1:1,5:6:15.05:257,15,0	1/1:3,6:9:18.06:308,18,0	1/1:3,7:9:21.07:360,21,0	1/1:1,1:2:3.01:51,3,0	1/1:0,3:3:9.03:154,9,0	0/0:5,0:5:2.96:0,3,19	1/1:1,3:4:6.01:103,6,0	0/0:16,0:15:17.38:0,17,383	0/0:18,0:18:51.15:0,51,658	0/0:9,0:8:18.06:0,18,240	0/1:3,4:7:18.34:190,0,18	1/1:2,4:6:11.96:205,12,0	0/1:4,6:10:18.19:233,0,18	1/1:6,3:9:9.02:155,9,0	0/0:10,0:10:27.09:0,27,354	0/0:23,0:23:39.12:0,39,505	0/0:7,0:7:21.07:0,21,279
chr10	94401948	.	AG	A	1847.44	PASS	AB=0.659;AC=19;AF=0.352;AN=54;BaseQRankSum=6.263;DP=310;FS=3.854;HRun=1;HaplotypeScore=122.5575;InbreedingCoeff=-0.2639;MQ=41.69;MQ0=11;MQRankSum=-6.599;QD=13.29;ReadPosRankSum=1.330;VQSLOD=2.8986;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,5:8:4.35:71,4,0	1/1:1,2:3:6.02:74,6,0	0/0:23,1:5:15.05:0,15,230	0/0:26,0:6:4.53:0,5,94	0/1:11,3:14:34.85:35,0,435	0/1:4,4:8:99:126,0,118	0/0:2,0:2:6.02:0,6,94	0/0:26,0:24:69.66:0,70,1018	./.	0/1:8,7:15:99:214,0,309	0/1:5,8:13:99:259,0,143	0/1:1,5:6:27.52:167,0,28	0/1:2,6:8:69.58:199,0,70	0/1:3,7:10:99:229,0,106	0/1:3,1:4:24.97:25,0,121	0/1:2,3:5:35:100,0,35	0/1:4,8:12:2.91:75,0,3	0/1:2,2:4:61.97:62,0,72	0/0:15,0:13:36.99:0,37,551	0/0:23,0:23:69.23:0,69,1090	0/0:8,0:7:9.03:0,9,142	0/1:2,4:6:76.44:131,0,76	0/1:3,4:7:75.06:130,0,75	0/1:2,2:4:30.98:31,0,39	0/1:9,3:12:78.05:78,0,306	0/0:15,0:15:45.15:0,45,704	0/0:17,0:17:18.06:0,18,271	0/0:15,0:14:42.14:0,42,651
chr10	94401950	.	AG	A	1943.33	PASS	AB=1.000;AC=20;AF=0.370;AN=54;BaseQRankSum=6.323;DP=310;FS=1.977;HRun=1;HaplotypeScore=123.1003;InbreedingCoeff=-0.1290;MQ=41.94;MQ0=11;MQRankSum=-8.680;QD=13.78;ReadPosRankSum=0.549;VQSLOD=2.9385;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,5:9:7.63:77,8,0	1/1:3,0:3:8.99:94,9,0	0/0:21,0:6:18.06:0,18,265	0/0:27,0:6:5.88:0,6,96	0/1:14,0:14:34.99:35,0,247	0/1:8,0:8:53.01:127,0,53	0/0:2,0:2:5.98:0,6,47	0/0:26,0:24:69.66:0,70,1018	./.	0/1:15,0:15:99:214,0,190	0/1:13,0:13:62:260,0,62	0/1:6,0:6:5.23:167,0,5	0/1:8,0:8:22.42:198,0,22	0/1:10,0:10:44.41:229,0,44	0/1:4,0:4:25.04:25,0,56	0/1:5,0:5:7.24:116,0,7	1/1:4,8:12:21.80:139,22,0	0/1:5,0:5:33.37:62,0,33	0/0:12,0:11:32.93:0,33,401	0/0:23,0:23:69.01:0,69,790	0/0:8,0:7:9:0,9,98	0/1:6,0:6:57.49:130,0,57	0/1:7,0:7:34.78:129,0,35	0/1:4,0:4:21.05:32,0,21	0/1:12,0:12:78.19:78,0,157	0/0:16,0:16:47.83:0,48,473	0/0:17,0:17:18.03:0,18,212	0/0:15,0:14:42.14:0,42,671
chr10	94401951	.	G	GAGAA	4898.58	PASS	AC=46;AF=0.852;AN=54;BaseQRankSum=1.432;DP=308;FS=30.568;HRun=0;HaplotypeScore=131.0233;InbreedingCoeff=0.5051;MQ=42.36;MQ0=10;MQRankSum=-1.897;QD=21.87;ReadPosRankSum=2.388;VQSLOD=3.0275;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:16.58:153,17,0	1/1:4,0:4:2.97:20,3,0	0/0:19,0:6:2.98:0,3,21	0/0:24,0:6:0:0,0,0	1/1:14,0:14:32.97:505,33,0	1/1:9,0:9:12:150,12,0	1/1:3,0:2:6.02:75,6,0	0/0:26,0:24:29.86:0,30,350	./.	1/1:15,0:15:23.57:327,24,0	1/1:13,0:13:12.04:162,12,0	1/1:6,0:6:3.01:38,3,0	1/1:8,0:8:6.02:71,6,0	1/1:10,0:10:9.03:121,9,0	1/1:4,0:4:9.03:114,9,0	1/1:5,0:5:5.98:60,6,0	1/1:12,0:12:2.06:16,2,0	1/1:5,0:5:6.86:64,7,0	1/1:8,5:11:15.05:338,15,0	1/1:7,16:23:48.16:974,48,0	1/1:2,6:7:6.02:144,6,0	1/1:6,0:6:3.01:52,3,0	1/1:7,0:7:6.02:88,6,0	1/1:4,0:4:3.01:51,3,0	1/1:12,0:12:27.05:346,27,0	1/1:2,13:17:44.91:821,45,0	1/1:4,13:17:9.03:210,9,0	0/0:15,0:14:39.13:0,39,614
chr10	94401953	.	GAA	G	121.55	PASS	AB=0.804;AC=6;AF=0.111;AN=54;BaseQRankSum=5.579;DP=308;FS=4.020;HRun=3;HaplotypeScore=137.9133;InbreedingCoeff=-0.0940;MQ=42.56;MQ0=10;MQRankSum=-6.324;QD=2.03;ReadPosRankSum=3.708;VQSLOD=0.0485;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:9:30.12:71,0,30	0/1:3,1:4:6.20:6,0,18	0/0:17,0:5:14.99:0,15,149	0/0:20,0:5:6.02:0,6,78	0/0:6,8:14:26.40:0,26,145	0/0:6,3:9:5.54:0,6,66	0/0:3,0:2:2.41:0,2,15	0/0:25,0:23:66.52:0,67,871	./.	0/1:9,6:15:19.68:20,0,108	0/0:11,2:13:32.11:0,32,144	0/0:5,1:6:11.62:0,12,64	0/0:7,1:8:19.68:0,20,99	0/0:8,2:10:20.16:0,20,113	0/0:3,1:4:7.32:0,7,46	0/0:4,1:5:0.64:0,1,42	0/1:11,3:14:7.26:123,0,7	0/1:5,1:6:5.23:5,0,70	0/0:13,0:11:30.10:0,30,402	0/0:23,0:23:66.21:0,66,965	0/0:9,0:8:12.03:0,12,141	0/0:5,1:6:15.99:0,16,85	0/0:6,1:7:13.41:0,13,59	0/0:3,1:4:2.74:0,3,13	0/1:5,7:12:5.14:5,0,36	0/0:18,0:18:54.08:0,54,633	0/0:17,0:17:18.05:0,18,213	0/0:16,0:15:45.14:0,45,814
chr10	94401970	.	AAAGAAAG	A	2920.50	PASS	AB=0.830;AC=24;AF=0.444;AN=54;BaseQRankSum=5.047;DP=299;FS=5.535;HRun=0;HaplotypeScore=145.3826;InbreedingCoeff=0.0535;MQ=49.69;MQ0=5;MQRankSum=-7.549;QD=18.60;ReadPosRankSum=2.682;VQSLOD=3.0055;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:39.82:422,40,0	0/1:3,1:4:23.72:90,0,24	0/0:13,0:2:5.81:0,6,102	0/0:10,0:2:5.20:0,5,28	1/1:6,8:14:37.62:407,38,0	1/1:7,3:10:9.01:267,9,0	1/1:4,0:3:8.69:101,9,0	0/0:27,0:25:72.19:0,72,1659	./.	0/1:8,6:14:34.33:289,0,34	0/1:10,2:12:9.83:190,0,10	0/1:4,1:5:25.62:26,0,42	0/1:8,1:9:51.90:76,0,52	0/1:9,2:11:30.19:162,0,30	0/1:3,1:4:7.03:77,0,7	0/1:5,1:6:6.37:101,0,6	0/1:18,0:18:81.13:239,0,81	0/1:8,1:9:99:158,0,145	0/0:12,0:12:33.07:0,33,609	0/0:19,0:19:57.19:0,57,1555	0/0:8,0:8:12.04:0,12,330	1/1:0,1:1:3:28,3,0	0/1:3,1:4:23.22:28,0,23	1/1:3,1:4:9.03:105,9,0	0/1:7,7:14:11.05:331,0,11	0/0:19,0:19:57.17:0,57,1411	0/0:17,0:17:18.06:0,18,426	0/0:17,0:17:51.16:0,51,1705
chr10	94401977	.	G	GA	3670.77	PASS	AB=0.950;AC=38;AF=0.704;AN=54;BaseQRankSum=8.442;DP=264;FS=4.218;HRun=7;HaplotypeScore=77.2406;InbreedingCoeff=0.3748;MQ=53.06;MQ0=4;MQRankSum=-6.850;QD=20.98;ReadPosRankSum=3.531;VQSLOD=3.3988;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:42.13:505,42,0	1/1:1,2:3:9.03:108,9,0	0/0:14,0:3:8.61:0,9,68	0/0:9,0:2:5.23:0,5,36	1/1:8,5:13:39.11:452,39,0	1/1:4,6:10:24.07:286,24,0	1/1:1,3:3:9.03:108,9,0	0/0:29,0:28:72.11:0,72,695	./.	1/1:6,3:9:27.08:316,27,0	1/1:2,5:7:21.06:250,21,0	1/1:1,0:1:3.01:36,3,0	1/1:1,2:3:9.03:108,9,0	1/1:2,3:5:15.05:178,15,0	1/1:1,2:3:9.03:108,9,0	1/1:1,3:4:12.04:144,12,0	0/1:16,0:19:2.54:285,0,3	0/1:4,3:7:35.68:134,0,36	0/1:9,0:9:3.07:3,0,84	0/1:19,0:19:27.21:27,0,79	0/1:8,0:8:2.73:3,0,47	1/1:1,0:1:3.01:34,3,0	1/1:1,1:2:6.02:70,6,0	1/1:1,2:3:9.03:106,9,0	1/1:7,4:11:33.10:394,33,0	0/1:18,0:18:17.09:17,0,151	0/0:18,0:18:0.49:0,0,98	0/0:18,0:18:54.09:0,54,521
chr10	94401980	.	A	AG	1831.20	PASS	AB=1.000;AC=36;AF=0.667;AN=54;BaseQRankSum=9.875;DP=270;FS=4.895;HRun=0;HaplotypeScore=87.8629;InbreedingCoeff=0.4355;MQ=53.15;MQ0=3;MQRankSum=-5.978;QD=11.45;ReadPosRankSum=3.986;VQSLOD=3.7728;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:41.66:212,42,0	1/1:3,0:3:8.15:39,8,0	0/0:15,0:4:11.07:0,11,127	0/0:10,0:2:5.98:0,6,62	1/1:13,0:13:37.30:208,37,0	1/1:10,0:10:5.43:94,5,0	1/1:4,0:3:8.18:40,8,0	0/0:30,0:30:81.25:0,81,1088	./.	1/1:9,0:9:25.28:133,25,0	0/1:8,0:8:3.36:76,0,3	1/1:1,0:1:2.90:16,3,0	1/1:3,0:3:8.30:41,8,0	1/1:5,0:5:13.93:70,14,0	1/1:3,0:3:8.71:49,9,0	1/1:4,0:4:11.08:56,11,0	1/1:5,15:20:14.10:598,14,0	0/1:7,0:7:23.99:36,0,24	0/0:9,0:9:2.03:0,2,128	0/1:17,0:17:49.98:50,0,96	0/0:8,0:8:0.19:0,0,74	1/1:1,0:1:2.88:15,3,0	1/1:2,0:2:5.78:31,6,0	1/1:3,0:3:8.29:41,8,0	1/1:11,0:11:30.84:160,31,0	0/1:18,0:18:40.53:41,0,223	0/0:19,0:19:8.53:0,9,184	0/0:19,0:19:57.08:0,57,770
chr10	94402617	.	G	GTGTA	7443.42	PASS	AB=1.000;AC=35;AF=0.648;AN=54;BaseQRankSum=-2.822;DP=566;FS=11.549;HRun=0;HaplotypeScore=144.0816;InbreedingCoeff=0.7400;MQ=57.19;MQ0=8;MQRankSum=0.883;QD=19.38;ReadPosRankSum=3.289;VQSLOD=4.2450;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:0.60:1,0,41	1/1:11,0:11:18.04:361,18,0	0/0:18,0:13:29.19:0,29,403	0/0:12,0:8:14.11:0,14,171	1/1:30,0:30:11.93:120,12,0	1/1:24,0:24:36.75:608,37,0	1/1:22,0:22:35.55:537,36,0	0/0:29,0:29:82.58:0,83,652	1/1:15,0:15:5.99:50,6,0	1/1:27,0:27:64.61:1125,65,0	1/1:28,0:27:2.06:92,2,0	1/1:12,0:12:17.79:242,18,0	1/1:22,0:22:38.06:656,38,0	1/1:21,0:21:28.27:493,28,0	1/1:24,0:24:50.96:841,51,0	1/1:21,0:21:29.72:655,30,0	0/1:12,0:12:20.93:21,0,33	1/1:16,0:16:22.22:457,22,0	0/0:18,0:17:29.83:0,30,371	0/0:24,0:23:46.42:0,46,325	0/1:15,0:15:8.33:8,0,227	1/1:26,0:26:33.28:590,33,0	1/1:17,0:17:23.78:389,24,0	./.	1/1:11,0:11:23.92:198,24,0	0/0:25,0:24:7.74:0,8,406	0/0:22,0:22:28.83:0,29,355	0/0:16,0:14:24.02:0,24,155
chr10	94402619	.	G	GTA	5378.24	PASS	AB=0.909;AC=32;AF=0.593;AN=54;BaseQRankSum=0.801;DP=563;FS=21.683;HRun=0;HaplotypeScore=132.5192;InbreedingCoeff=0.6511;MQ=56.03;MQ0=8;MQRankSum=1.540;QD=14.58;ReadPosRankSum=4.933;VQSLOD=3.1751;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:0.82:1,0,27	1/1:11,0:11:17.75:240,18,0	0/0:17,0:12:29.18:0,29,347	0/0:12,0:8:14.11:0,14,160	1/1:11,18:29:9.81:74,10,0	1/1:23,0:23:33.27:432,33,0	1/1:21,0:21:35.08:400,35,0	0/0:30,0:30:60.33:0,60,518	1/1:3,13:15:5.60:28,6,0	1/1:9,17:27:39.14:766,39,0	0/1:12,14:27:20.53:81,0,21	1/1:13,0:13:17.79:191,18,0	1/1:21,0:21:37.41:470,37,0	1/1:22,0:22:25.93:378,26,0	1/1:23,0:23:50.12:583,50,0	1/1:20,0:20:14.87:438,15,0	0/0:11,0:11:0.96:0,1,39	0/1:16,0:16:6.69:259,0,7	0/0:18,0:17:38.15:0,38,304	0/0:26,0:25:16.85:0,17,94	0/0:15,0:15:15.57:0,16,128	1/1:26,0:26:32.65:428,33,0	1/1:17,0:17:23.94:280,24,0	./.	1/1:10,0:10:5.09:323,5,0	0/0:25,0:24:4.32:0,4,174	0/0:22,0:22:29.29:0,29,186	0/1:16,0:14:5.62:6,0,71
chr10	94402794	.	C	CAG	745.44	PASS	AB=0.885;AC=21;AF=0.420;AN=50;BaseQRankSum=-1.235;DP=623;FS=1.992;HRun=0;HaplotypeScore=94.4309;InbreedingCoeff=0.4366;MQ=57.67;MQ0=13;MQRankSum=-1.649;QD=2.81;ReadPosRankSum=-2.020;VQSLOD=1.8497;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:34:6:55,6,0	./.	./.	./.	0/0:26,4:31:0.47:0,0,1	0/1:20,2:21:32.66:33,0,66	0/0:15,0:15:15.47:0,15,142	1/1:30,0:29:8.54:46,9,0	0/0:16,0:27:11.36:0,11,56	0/0:15,0:15:8.79:0,9,56	0/0:22,0:22:3:0,3,31	0/0:18,0:17:11.84:0,12,102	0/0:19,0:19:5.96:0,6,64	0/0:19,0:19:5.89:0,6,56	0/1:20,10:31:48.76:116,0,49	0/0:26,0:26:5.96:0,6,51	1/1:16,0:15:8.92:64,9,0	0/1:15,0:17:14.28:14,0,66	1/1:23,0:22:0.65:107,1,0	1/1:14,0:14:7.84:85,8,0	1/1:31,0:32:6.01:68,6,0	0/0:18,0:18:5.99:0,6,55	0/0:19,0:25:0:0,0,0	0/0:17,0:21:0.78:0,1,4	0/0:15,0:15:12.01:0,12,120	1/1:17,4:22:17.98:188,18,0	1/1:13,0:13:9.46:75,9,0	1/1:7,0:7:6.46:56,6,0
chr10	94402864	.	T	TG	519.98	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.606;DP=581;FS=3.639;HRun=4;HaplotypeScore=128.2109;InbreedingCoeff=0.9798;MQ=82.08;MQ0=3;MQRankSum=-3.057;QD=30.59;ReadPosRankSum=-0.169;VQSLOD=2.2319;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,1113	0/0:8,0:8:24.07:0,24,272	0/0:24,0:21:45.48:0,45,565	0/0:30,0:24:56.28:0,56,642	0/0:19,0:19:48:0,48,530	0/0:20,0:20:54.15:0,54,612	0/0:21,0:21:60.16:0,60,670	0/0:37,0:38:92.27:0,92,1010	0/0:22,0:22:57.12:0,57,632	0/0:14,0:14:42.12:0,42,475	0/0:30,0:30:81.23:0,81,918	0/0:28,0:28:75.21:0,75,849	0/0:18,0:18:51.14:0,51,577	0/0:17,0:17:45.13:0,45,510	0/0:19,0:19:36.06:0,36,394	0/0:24,0:24:72.16:0,72,795	1/1:0,17:17:45.15:615,45,0	0/0:8,0:8:24.07:0,24,272	0/0:17,0:17:42.12:0,42,476	0/0:16,0:16:45.13:0,45,510	0/0:24,0:24:57.14:0,57,637	0/0:16,0:16:48.14:0,48,541	0/0:20,0:20:54.08:0,54,572	0/0:29,0:28:66.19:0,66,747	0/0:20,0:20:60.15:0,60,663	0/0:27,0:27:81.23:0,81,918	0/0:12,0:12:30.08:0,30,339	0/0:5,0:5:15.04:0,15,170
chr10	94403086	.	GT	G	853.68	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.988;DP=520;FS=1.475;HRun=7;HaplotypeScore=65.7431;InbreedingCoeff=0.9907;MQ=70.69;MQ0=0;MQRankSum=-0.991;QD=23.71;ReadPosRankSum=1.629;VQSLOD=4.0879;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:36:93.21:949,93,0	0/0:14,0:14:42.12:0,42,515	0/0:16,0:16:38.94:0,39,438	0/0:9,0:8:17.99:0,18,205	0/0:27,0:27:75.24:0,75,943	0/0:20,0:20:45.14:0,45,566	0/0:12,0:12:30.10:0,30,377	0/0:28,0:28:63.17:0,63,758	0/0:13,0:13:39.12:0,39,490	0/0:22,0:22:60.19:0,60,753	0/0:22,0:22:60.19:0,60,749	0/0:16,0:16:42.12:0,42,515	0/0:17,0:17:48.14:0,48,591	0/0:24,0:24:63.20:0,63,784	0/0:17,0:17:45.14:0,45,564	0/0:16,0:16:42.13:0,42,528	0/0:16,0:16:48.11:0,48,574	0/0:20,0:19:51.16:0,51,642	0/0:14,0:14:39.12:0,39,488	0/0:22,0:22:63.20:0,63,792	0/0:18,0:18:48.15:0,48,602	0/0:17,0:17:42.13:0,42,528	0/0:23,0:23:69.22:0,69,864	0/0:15,0:15:45.14:0,45,564	0/0:13,0:13:39.11:0,39,478	0/0:22,0:22:63.20:0,63,793	0/0:18,0:18:51.16:0,51,641	0/0:13,0:13:33.11:0,33,415
chr10	94403251	.	A	AT	7203.65	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=8.008;DP=430;FS=0.378;HRun=8;HaplotypeScore=63.1003;InbreedingCoeff=0.9148;MQ=74.85;MQ0=0;MQRankSum=0.711;QD=29.05;ReadPosRankSum=1.108;VQSLOD=5.0764;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.02:0,72,659	1/1:1,6:7:18.05:208,18,0	0/0:16,0:16:6.50:0,6,262	0/0:5,0:5:5.99:0,6,55	1/1:2,13:15:39.12:450,39,0	1/1:0,19:19:57.17:658,57,0	1/1:2,6:8:18.05:208,18,0	0/0:31,0:31:81.03:0,81,741	1/1:2,11:13:33.10:381,33,0	1/1:4,21:25:63.18:718,63,0	1/1:1,11:12:8.64:353,9,0	1/1:2,12:14:33.10:381,33,0	1/1:2,10:14:15.04:385,15,0	1/1:3,10:13:2.62:284,3,0	1/1:1,21:22:60.18:693,60,0	1/1:1,11:12:33.10:381,33,0	0/0:12,0:12:33.02:0,33,302	1/1:3,10:13:33.10:381,33,0	0/0:10,0:10:24.01:0,24,220	0/0:15,0:15:42.02:0,42,384	0/0:11,0:11:30.02:0,30,275	1/1:3,10:13:5.63:319,6,0	1/1:1,10:11:30.09:346,30,0	1/1:1,17:18:45.13:519,45,0	1/1:2,17:19:48.10:539,48,0	0/0:21,0:21:57:0,57,516	0/0:23,0:23:60.03:0,60,549	0/0:10,0:10:27.01:0,27,247
chr10	94403372	.	ACC	A	10836.60	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=7.365;DP=521;FS=8.715;HRun=9;HaplotypeScore=91.5462;InbreedingCoeff=0.9937;MQ=79.49;MQ0=2;MQRankSum=-1.766;QD=29.94;ReadPosRankSum=6.187;VQSLOD=4.3132;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,36:39:99:1154,99,0	1/1:1,8:9:21.06:245,21,0	0/0:17,0:17:45.05:0,45,632	0/0:24,0:22:45.61:0,46,478	1/1:1,12:13:30.09:350,30,0	1/1:2,15:17:42.12:489,42,0	1/1:1,19:20:57.17:664,57,0	0/0:8,0:15:24.05:0,24,282	1/1:0,19:19:57.17:664,57,0	1/1:1,15:16:48.14:559,48,0	1/1:2,13:15:39.11:454,39,0	1/1:5,19:24:57.14:652,57,0	1/1:1,15:16:39.11:454,39,0	1/1:2,15:17:33.09:385,33,0	1/1:1,25:26:75.22:874,75,0	1/1:1,17:18:48.14:559,48,0	1/1:0,18:18:45.13:524,45,0	1/1:1,19:19:51.15:594,51,0	0/0:15,0:15:42.14:0,42,679	0/0:8,0:8:24.07:0,24,367	0/0:27,0:30:83.72:0,84,1242	1/1:0,18:18:51.15:594,51,0	1/1:1,13:14:38.95:432,39,0	1/1:2,20:22:54.16:629,54,0	1/1:4,17:21:48.13:559,48,0	0/0:23,0:24:59.69:0,60,925	0/0:21,0:21:57.18:0,57,888	0/0:2,0:5:11.99:0,12,108
chr10	94403692	.	ACC	A	1274.16	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.690;DP=644;FS=12.418;HRun=2;HaplotypeScore=77.1072;InbreedingCoeff=0.8832;MQ=67.67;MQ0=0;MQRankSum=-0.769;QD=43.94;ReadPosRankSum=1.088;VQSLOD=2.3686;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,2238	0/0:4,0:4:12.04:0,12,232	0/0:15,0:15:10.46:0,10,625	0/0:23,0:19:52.91:0,53,905	0/0:20,0:20:60.21:0,60,1169	0/0:24,0:24:72.25:0,72,1462	0/0:28,0:28:84.27:0,84,1667	0/0:24,0:24:69.22:0,69,1347	0/0:31,0:31:93.32:0,93,1880	0/0:29,0:29:87.30:0,87,1759	0/0:17,0:17:45.15:0,45,911	0/0:27,0:27:81.28:0,81,1632	0/0:27,0:27:78.27:0,78,1573	0/0:26,0:26:78.27:0,78,1574	0/0:37,0:37:99:0,111,2222	0/0:21,0:21:63.22:0,63,1270	1/1:0,29:29:84.29:1369,84,0	0/0:29,0:29:87.30:0,87,1762	0/0:23,0:23:69.24:0,69,1400	0/0:13,0:13:39.13:0,39,792	0/0:34,0:34:99:0,99,1960	0/0:16,0:16:45.14:0,45,867	0/0:22,0:22:66.23:0,66,1333	0/0:22,0:22:66.23:0,66,1341	0/0:16,0:16:48.16:0,48,975	0/0:18,0:18:54.19:0,54,1098	0/0:29,0:29:87.30:0,87,1751	0/0:3,0:3:9.03:0,9,183
chr10	94404483	.	TACACACACAC	T	1066.40	PASS	AB=0.950;AC=22;AF=0.423;AN=52;BaseQRankSum=4.470;DP=518;FS=44.093;HRun=0;HaplotypeScore=193.3314;InbreedingCoeff=0.1945;MQ=62.48;MQ0=12;MQRankSum=-4.121;QD=4.33;ReadPosRankSum=-1.328;VQSLOD=0.9924;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:5.34:77,5,0	1/1:6,0:7:3.01:64,3,0	./.	./.	1/1:12,3:15:3.01:70,3,0	0/1:17,0:17:14.99:15,0,138	0/0:19,0:21:5.05:0,5,62	0/0:22,0:22:1.55:0,2,4	1/1:11,6:16:6.02:176,6,0	1/1:18,0:17:6:85,6,0	0/1:12,1:12:1.93:130,0,2	0/1:18,0:18:23.51:32,0,24	0/1:14,0:14:22.75:23,0,87	0/0:11,0:11:12.04:0,12,210	1/1:12,1:13:3.01:88,3,0	0/1:14,1:14:43.10:82,0,43	0/1:22,0:22:23.84:24,0,60	0/1:13,1:14:18.42:81,0,18	0/0:16,0:16:3.48:0,3,76	0/0:13,0:13:18.02:0,18,471	0/0:38,0:37:30.53:0,31,776	0/0:18,0:22:6.02:0,6,95	0/0:13,0:12:11.68:0,12,91	0/0:24,0:28:19.10:0,19,170	1/1:12,3:15:9.03:262,9,0	0/0:20,0:20:25.31:0,25,466	0/0:16,0:20:18.04:0,18,414	0/1:14,0:15:4.68:19,0,5
chr10	94405548	.	AGGC	A	895.59	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.547;DP=689;FS=0.000;HRun=0;HaplotypeScore=100.9060;InbreedingCoeff=0.8816;MQ=85.28;MQ0=0;MQRankSum=-0.799;QD=37.32;ReadPosRankSum=0.356;VQSLOD=3.8774;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,3518	0/0:10,0:10:30.10:0,30,736	0/0:27,0:27:74.98:0,75,1648	0/0:17,0:17:4.74:0,5,839	0/0:42,0:42:99:0,126,3077	0/0:17,0:17:51.16:0,51,1200	0/0:13,0:13:39.13:0,39,962	0/0:28,0:28:81.28:0,81,1952	0/0:26,0:26:78.27:0,78,1890	0/0:20,0:20:60.21:0,60,1490	0/0:20,0:20:60.21:0,60,1469	0/0:28,0:28:84.29:0,84,2070	0/0:20,0:20:60.18:0,60,1427	0/0:32,0:32:96.33:0,96,2361	0/0:31,0:31:93.32:0,93,2295	0/0:21,0:21:63.22:0,63,1528	1/1:0,24:24:54.18:990,54,0	0/0:16,0:16:48.16:0,48,1159	0/0:29,0:29:87.29:0,87,2051	0/0:30,0:30:90.31:0,90,2217	0/0:27,0:27:81.26:0,81,1911	0/0:26,0:26:78.27:0,78,1922	0/0:20,0:20:60.21:0,60,1442	0/0:22,0:22:66.23:0,66,1627	0/0:22,0:22:66.23:0,66,1626	0/0:29,0:29:87.30:0,87,2144	0/0:36,0:35:99:0,108,2658	0/0:8,0:8:24.08:0,24,591
chr10	94407211	.	T	TA	7647.46	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=12.873;DP=376;FS=7.293;HRun=7;HaplotypeScore=52.1101;InbreedingCoeff=0.9463;MQ=71.18;MQ0=0;MQRankSum=-1.256;QD=31.73;ReadPosRankSum=3.343;VQSLOD=4.7865;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:63.19:761,63,0	1/1:0,3:3:9.03:109,9,0	0/0:5,0:5:15.02:0,15,141	0/0:7,0:8:14.80:0,15,129	1/1:1,16:17:48.15:580,48,0	1/1:1,14:15:39.12:471,39,0	1/1:0,8:8:18.06:217,18,0	0/0:27,0:27:69.10:0,69,666	1/1:0,11:11:30.09:362,30,0	1/1:0,17:17:51.15:607,51,0	1/1:1,12:13:36.11:435,36,0	1/1:1,11:12:33.10:399,33,0	1/1:1,16:17:45.14:541,45,0	1/1:0,10:10:24.07:290,24,0	1/1:1,13:14:36.11:435,36,0	1/1:1,7:9:20.93:232,21,0	1/1:4,15:19:36.11:435,36,0	1/1:0,20:20:57.17:687,57,0	0/0:16,0:16:45.06:0,45,430	0/0:22,0:22:60.08:0,60,573	0/0:6,0:6:18:0,18,166	1/1:0,2:2:6.02:72,6,0	1/1:0,10:10:30.09:362,30,0	1/1:0,7:7:15.05:181,15,0	1/1:0,14:14:39.12:471,39,0	0/0:14,1:15:5.85:0,6,340	0/0:25,0:24:75.12:0,75,724	0/0:11,0:11:30.05:0,30,290
chr10	94407322	.	AGAAGAAGAAGAAGAAGAAGAAGAG	A	3580.17	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=8.220;DP=529;FS=2.694;HRun=0;HaplotypeScore=285.6048;InbreedingCoeff=-0.1954;MQ=53.85;MQ0=59;MQRankSum=4.007;QD=10.82;ReadPosRankSum=-0.924;VQSLOD=2.1731;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:24:38.01:308,0,38	1/1:5,0:5:14.90:140,15,0	0/0:13,0:4:5.09:0,5,59	0/0:11,0:5:6.05:0,6,82	1/1:3,19:19:32.59:246,33,0	0/1:22,0:20:99:152,0,817	0/1:21,0:16:74.57:232,0,75	0/0:33,0:12:35.42:0,35,268	0/1:12,0:12:2.88:177,0,3	0/1:21,0:20:63.61:338,0,64	1/1:18,0:17:17.62:310,18,0	0/1:16,0:15:99:148,0,527	0/1:13,0:10:64.86:65,0,221	0/1:10,0:9:45.71:46,0,332	0/1:13,0:13:47.10:260,0,47	0/1:13,0:11:37.56:129,0,38	0/1:24,0:21:99:229,0,721	0/1:26,0:24:99:189,0,384	0/0:19,0:13:36.08:0,36,863	0/0:25,0:23:66.12:0,66,2531	0/0:18,0:17:44.57:0,45,1236	0/1:15,0:15:99:197,0,220	0/1:8,0:7:24.46:24,0,319	0/1:30,0:27:99:274,0,495	0/1:16,0:14:99:118,0,180	0/0:24,0:21:35.14:0,35,1469	0/0:27,0:23:66.10:0,66,2433	0/0:27,0:25:72.16:0,72,3692
chr10	94408090	.	ATCTG	A	3114.72	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.230;DP=777;FS=12.571;HRun=0;HaplotypeScore=122.2135;InbreedingCoeff=0.9820;MQ=72.92;MQ0=5;MQRankSum=-1.352;QD=26.40;ReadPosRankSum=-0.511;VQSLOD=2.8157;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,40:52:99:1683,102,0	0/0:5,0:5:12.04:0,12,294	0/0:37,0:30:30.10:0,30,687	0/0:29,0:28:45.04:0,45,949	0/0:13,0:13:24.08:0,24,587	0/0:18,0:18:45.14:0,45,1035	0/0:29,0:29:66.20:0,66,1496	1/1:13,19:32:57.03:747,57,0	0/0:15,0:15:42.14:0,42,968	0/0:33,0:33:90.31:0,90,2157	0/0:22,0:22:47.63:0,48,1132	0/0:32,0:32:75.26:0,75,1773	0/0:25,0:25:69.22:0,69,1600	0/0:23,0:23:54.15:0,54,1180	0/0:30,0:30:69.22:0,69,1634	0/0:32,0:32:84.27:0,84,1962	1/1:9,18:27:39.13:644,39,0	0/0:30,0:30:84.25:0,84,2006	0/0:16,0:16:36.12:0,36,882	0/0:22,0:22:48.16:0,48,1123	0/0:66,0:66:99:0,156,3645	0/0:27,0:27:66.20:0,66,1522	0/0:16,0:16:33.10:0,33,727	0/0:53,0:53:99:0,132,3083	0/0:19,0:19:36.12:0,36,883	0/0:32,0:32:69.23:0,69,1606	0/0:34,0:34:93.28:0,93,2126	1/1:0,5:5:12.04:198,12,0
chr10	94409161	.	T	TG	429.21	PASS	AB=0.500;AC=23;AF=0.958;AN=24;DP=48;FS=0.000;HRun=1;HaplotypeScore=23.1287;InbreedingCoeff=0.0790;MQ=41.55;MQ0=0;QD=10.47;VQSLOD=1.3028;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:0,0:1:0:0,0,0	1/1:1,0:1:2.98:21,3,0	./.	./.	./.	./.	./.	1/1:0,1:1:2.80:13,3,0	./.	./.	./.	./.	./.	1/1:1,0:1:2.96:19,3,0	./.	./.	1/1:3,0:3:2.90:16,3,0	1/1:2,1:3:2.74:12,3,0	1/1:0,2:2:5.72:29,6,0	1/1:6,5:11:16.72:116,17,0	1/1:2,2:3:2.98:22,3,0	./.	./.	./.	./.	1/1:4,7:11:30.67:202,31,0	1/1:1,1:2:5.83:37,6,0	1/1:0,1:1:2.74:12,3,0
chr10	94409395	.	ATATGTATGTATGTATGTATG	A	2996.45	PASS	AB=0.807;AC=24;AF=0.444;AN=54;BaseQRankSum=-2.839;DP=819;FS=42.382;HRun=0;HaplotypeScore=412.8409;InbreedingCoeff=0.7488;MQ=54.24;MQ0=4;MQRankSum=-1.616;QD=11.31;ReadPosRankSum=3.039;VQSLOD=1.0930;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:64.38:0,64,1409	0/0:4,6:10:0.94:0,1,1	0/0:39,0:23:11.92:0,12,90	0/0:41,0:31:17.53:0,18,205	1/1:17,6:23:7.93:143,8,0	0/0:8,22:30:0.46:0,0,1	1/1:26,1:26:17.95:264,18,0	0/0:51,0:50:87.18:0,87,1854	0/0:11,24:35:1.41:0,1,2	1/1:21,2:23:30.47:810,30,0	1/1:13,3:16:14.30:180,14,0	1/1:23,0:23:17.86:392,18,0	1/1:13,1:14:8.96:171,9,0	1/1:6,17:23:3.01:147,3,0	./.	0/1:10,10:20:0:0,0,0	0/0:28,0:28:24.41:0,24,591	0/1:17,1:18:43.54:188,0,44	0/0:14,0:21:36.05:0,36,1224	0/0:32,0:44:90.17:0,90,3718	0/0:66,0:79:99:0,145,6009	1/1:16,4:20:14.59:309,15,0	1/1:18,2:20:14.69:296,15,0	1/1:23,0:23:8.56:118,9,0	1/1:12,3:15:11.48:169,11,0	0/0:41,0:46:81.22:0,81,3701	0/0:21,0:33:50.16:0,50,1785	0/0:17,0:17:8.98:0,9,252
chr10	94409427	.	GTA	G	228.62	PASS	AB=0.955;AC=7;AF=0.125;AN=56;BaseQRankSum=5.581;DP=653;FS=3.735;HRun=0;HaplotypeScore=153.3490;InbreedingCoeff=-0.0890;MQ=48.85;MQ0=14;MQRankSum=2.834;QD=1.92;ReadPosRankSum=1.279;VQSLOD=2.7241;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,13:43:99:198,0,215	0/1:6,0:6:0:0,0,0	0/0:17,0:8:19.89:0,20,233	0/0:23,0:14:17.09:0,17,408	0/0:20,0:20:6.09:0,6,107	0/0:24,0:24:2.76:0,3,43	0/0:21,0:20:8.84:0,9,279	0/0:51,0:49:99:0,136,1998	0/0:29,0:29:12.04:0,12,171	0/1:16,0:16:3.75:4,0,261	0/1:14,0:14:21.94:22,0,114	0/0:11,0:11:5.93:0,6,62	0/1:15,0:13:0.66:1,0,31	0/0:19,0:19:2.23:0,2,42	0/0:22,0:22:3.01:0,3,42	0/0:13,0:13:3.01:0,3,40	0/0:20,0:18:35.76:0,36,485	0/1:10,1:11:83.96:91,0,84	0/0:26,0:22:63.20:0,63,923	0/0:31,0:30:84.12:0,84,1081	0/0:68,1:68:99:0,168,2286	0/0:17,0:16:14.55:0,15,118	0/1:14,0:14:13.69:21,0,14	0/0:21,0:20:3.17:0,3,137	0/0:16,0:16:8.85:0,9,167	0/0:45,0:43:99:0,123,1643	0/0:29,0:29:60.12:0,60,880	0/0:8,0:8:14.63:0,15,333
chr10	94409467	.	C	CTGTGTG	2608.92	PASS	AB=0.989;AC=37;AF=0.712;AN=52;BaseQRankSum=-0.327;DP=781;FS=1.604;HRun=0;HaplotypeScore=204.1863;InbreedingCoeff=0.1880;MQ=50.35;MQ0=22;MQRankSum=2.395;QD=4.55;ReadPosRankSum=-2.484;VQSLOD=2.2065;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:40:40.54:41,0,51	1/1:9,0:10:9.01:99,9,0	./.	./.	1/1:21,0:20:6:76,6,0	1/1:27,2:32:25.78:424,26,0	1/1:35,1:34:5.97:159,6,0	1/1:32,0:31:5.75:40,6,0	1/1:27,0:30:15.55:241,16,0	1/1:24,0:25:20.66:169,21,0	1/1:17,0:17:5.96:68,6,0	1/1:8,10:20:6.02:87,6,0	1/1:7,10:17:6.49:99,6,0	1/1:29,0:30:26.78:331,27,0	1/1:22,3:25:11.68:185,12,0	1/1:21,0:24:14.07:141,14,0	0/1:23,0:24:25.91:116,0,26	0/1:16,0:15:27.02:52,0,27	0/0:20,0:20:3.01:0,3,60	0/1:21,0:19:26.98:27,0,52	0/1:50,0:49:3.45:3,0,244	0/0:17,2:16:0.47:0,0,1	1/1:15,0:15:3.48:50,3,0	1/1:25,2:27:17.41:304,17,0	0/1:15,0:15:28.28:48,0,28	0/1:35,0:38:6.55:7,0,228	0/0:25,0:27:20.12:0,20,297	0/0:10,0:10:15.03:0,15,241
chr10	94409793	.	G	GT	1399.81	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.664;DP=626;FS=25.914;HRun=7;HaplotypeScore=61.0414;InbreedingCoeff=0.9734;MQ=67.40;MQ0=3;MQRankSum=-1.000;QD=23.73;ReadPosRankSum=3.222;VQSLOD=2.0489;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,22:29:57.17:688,57,0	0/0:10,0:10:27.01:0,27,253	0/0:21,0:13:10.13:0,10,230	0/0:30,0:23:37.82:0,38,353	0/0:30,0:30:75.11:0,75,722	0/0:19,0:19:54.08:0,54,521	0/0:29,0:29:84.12:0,84,804	0/0:30,0:30:75.10:0,75,720	0/0:24,0:24:60.10:0,60,579	0/0:19,0:19:51.08:0,51,492	0/0:23,0:23:54.08:0,54,521	0/0:25,0:25:72.12:0,72,695	0/0:21,0:21:60.08:0,60,574	0/0:15,0:15:39.06:0,39,377	0/0:26,0:26:75.12:0,75,724	0/0:16,0:16:48.08:0,48,463	1/1:4,26:30:69.21:834,69,0	0/0:30,0:30:63.08:0,63,606	0/0:26,0:26:72.10:0,72,690	0/0:31,0:31:87.14:0,87,839	0/0:12,0:12:36.06:0,36,347	0/0:13,0:13:39.06:0,39,376	0/0:21,0:20:48.06:0,48,458	0/0:9,0:9:27.04:0,27,261	0/0:21,0:21:60.09:0,60,579	0/0:26,0:25:75.11:0,75,718	0/0:31,0:30:77.91:0,78,737	0/0:8,0:8:21.03:0,21,202
chr10	94410352	.	GTT	G	9651.72	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=14.382;DP=581;FS=1.531;HRun=11;HaplotypeScore=94.4540;InbreedingCoeff=0.9957;MQ=71.78;MQ0=0;MQRankSum=-0.941;QD=25.60;ReadPosRankSum=6.174;VQSLOD=4.8480;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:22:49.40:216,49,0	1/1:1,6:7:18.04:192,18,0	0/0:10,0:9:17.09:0,17,213	0/0:15,0:15:20.83:0,21,238	1/1:4,39:43:99:1168,111,0	1/1:7,17:24:51.11:543,51,0	1/1:3,10:13:27.05:287,27,0	0/0:34,0:35:78.22:0,78,1166	1/1:2,18:20:54.13:575,54,0	1/1:4,25:29:78.17:829,78,0	1/1:3,20:24:56.79:574,57,0	1/1:2,12:14:36.07:383,36,0	1/1:3,21:24:63.13:670,63,0	1/1:0,14:14:33.08:351,33,0	1/1:3,11:14:36.09:383,36,0	1/1:2,16:18:48.11:511,48,0	1/1:6,25:31:75.14:798,75,0	1/1:3,19:22:57.13:607,57,0	0/0:26,0:26:69.21:0,69,1021	0/0:23,0:23:54.18:0,54,831	0/0:18,0:18:45.14:0,45,672	1/1:3,8:11:24.06:255,24,0	1/1:2,15:17:45.11:479,45,0	1/1:2,9:11:27.06:287,27,0	1/1:1,18:19:51.12:543,51,0	0/0:26,0:26:74.05:0,74,1092	0/0:39,0:39:99:0,114,1719	0/0:11,0:11:33.11:0,33,506
chr10	94410412	.	CTTTG	C	10991.74	PASS	AB=0.909;AC=39;AF=0.722;AN=54;BaseQRankSum=12.310;DP=594;FS=8.042;HRun=0;HaplotypeScore=123.5238;InbreedingCoeff=0.8924;MQ=69.35;MQ0=0;MQRankSum=2.173;QD=27.62;ReadPosRankSum=3.855;VQSLOD=4.2695;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:22:30.34:349,30,0	1/1:2,4:6:15.05:239,15,0	./.	0/0:21,0:20:18.06:0,18,403	1/1:16,13:29:45.15:689,45,0	1/1:9,13:22:42.14:671,42,0	1/1:8,2:10:12.02:146,12,0	0/0:35,0:35:30.10:0,30,656	1/1:8,10:18:32.65:526,33,0	1/1:9,11:21:42.14:670,42,0	1/1:10,8:18:30.10:478,30,0	1/1:8,16:24:63.20:956,63,0	1/1:12,16:28:19.66:817,20,0	1/1:7,12:20:45.15:673,45,0	1/1:3,16:19:45.15:719,45,0	1/1:14,2:16:15.05:225,15,0	1/1:14,16:30:54.17:839,54,0	1/1:7,16:23:23.57:729,24,0	0/0:25,0:24:35.58:0,36,605	0/0:29,0:29:48.63:0,49,1133	0/0:23,0:23:45.15:0,45,1068	1/1:6,9:15:33.11:527,33,0	1/1:9,9:18:33.11:526,33,0	1/1:4,13:17:39.13:623,39,0	1/1:13,9:22:36.11:538,36,0	0/1:18,2:20:53.67:54,0,821	0/0:38,0:38:63.21:0,63,1488	0/0:8,0:8:18.06:0,18,430
chr10	94411503	.	GCT	G	4055.60	PASS	AB=0.900;AC=35;AF=0.625;AN=56;BaseQRankSum=15.812;DP=375;FS=0.818;HRun=0;HaplotypeScore=190.5908;InbreedingCoeff=0.9114;MQ=103.92;MQ0=0;MQRankSum=-15.457;QD=23.86;ReadPosRankSum=7.194;VQSLOD=3.5706;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.24:0,69,1381	1/1:0,5:5:15.03:149,15,0	0/0:30,0:30:90.31:0,90,1758	0/0:21,0:21:63.17:0,63,1219	1/1:0,20:20:44.97:425,45,0	1/1:0,8:8:24.04:236,24,0	1/1:1,4:5:12.01:114,12,0	0/0:25,0:25:72.25:0,72,1443	1/1:0,8:8:24.04:235,24,0	1/1:0,14:14:42.08:431,42,0	1/1:0,14:14:33.05:317,33,0	1/1:1,9:10:29.89:277,30,0	1/1:0,11:11:33.06:330,33,0	1/1:0,8:8:24.04:235,24,0	1/1:2,7:9:27.04:261,27,0	1/1:0,7:8:23.88:221,24,0	0/0:11,0:11:33.11:0,33,671	1/1:0,4:4:12.03:125,12,0	0/0:8,0:8:24.08:0,24,469	0/0:21,0:21:63.22:0,63,1279	0/0:24,0:24:69.24:0,69,1382	1/1:0,6:6:18.03:178,18,0	1/1:1,4:5:11.99:108,12,0	1/1:2,3:5:9:79,9,0	1/1:0,11:11:33.06:327,33,0	0/1:16,2:18:6.41:6,0,921	0/0:29,0:29:87.28:0,87,1732	0/0:13,0:13:39.13:0,39,792
chr10	94411506	.	ACTATGTCTCTTGCAATTGTTTGTTT	A	25883.69	PASS	AB=0.905;AC=35;AF=0.625;AN=56;BaseQRankSum=15.895;DP=375;FS=2.862;HRun=0;HaplotypeScore=294.8787;InbreedingCoeff=0.8804;MQ=103.01;MQ0=0;MQRankSum=-15.830;QD=159.78;ReadPosRankSum=7.948;VQSLOD=3.9150;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.25:0,72,7510	1/1:0,5:5:15.05:953,15,0	0/0:27,0:27:81.24:0,81,5993	0/0:23,0:23:66.22:0,66,4116	1/1:1,18:19:51.18:2978,51,0	1/1:0,8:8:24.08:1522,24,0	1/1:0,4:4:12.04:678,12,0	0/0:28,0:28:81.27:0,81,6438	1/1:0,8:8:24.08:1521,24,0	1/1:0,14:14:42.14:2681,42,0	1/1:0,12:12:36.12:2186,36,0	1/1:0,9:9:27.09:1696,27,0	1/1:0,11:11:33.11:2097,33,0	1/1:0,8:8:24.08:1520,24,0	1/1:0,7:7:21.07:1336,21,0	1/1:1,7:8:24.08:1507,24,0	0/0:12,0:12:36.12:0,36,2804	1/1:1,4:4:12.04:768,12,0	0/0:9,0:9:27.09:0,27,1956	0/0:21,0:21:63.20:0,63,6617	0/0:25,0:25:70.16:0,70,7493	1/1:0,6:6:18.06:1143,18,0	1/1:1,4:5:15.05:690,15,0	1/1:0,3:3:2.42:188,2,0	1/1:0,11:11:33.11:2095,33,0	0/1:17,2:19:99:325,0,5435	0/0:31,0:31:93.32:0,93,9487	0/0:13,0:13:39.13:0,39,3814
chr10	94413298	.	AAT	A	11961.93	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=13.023;DP=520;FS=0.728;HRun=0;HaplotypeScore=66.9718;InbreedingCoeff=0.9370;MQ=73.87;MQ0=4;MQRankSum=-0.900;QD=33.51;ReadPosRankSum=0.439;VQSLOD=6.6722;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:45.06:0,45,702	1/1:0,8:8:21.07:309,21,0	0/1:14,0:14:3.38:3,0,273	0/0:14,0:12:11.50:0,11,245	1/1:2,37:39:99:1517,108,0	0/0:30,0:29:87.27:0,87,1465	0/0:12,0:12:36.09:0,36,567	1/1:0,26:26:78.17:1005,78,0	1/1:0,11:11:18.06:264,18,0	1/1:0,25:25:72.11:922,72,0	1/1:1,24:24:72.15:994,72,0	0/0:13,0:13:39.13:0,39,652	0/0:16,0:16:45.13:0,45,741	0/0:12,0:12:36.10:0,36,568	1/1:0,17:16:39.13:574,39,0	1/1:1,18:19:45.13:641,45,0	1/1:0,22:21:54.17:776,54,0	1/1:0,14:13:18.06:264,18,0	1/1:0,15:15:44.81:608,45,0	1/1:1,36:37:99:1404,105,0	1/1:0,10:10:15.05:220,15,0	0/0:12,0:12:36.12:0,36,597	0/0:16,0:16:45.08:0,45,660	0/0:23,0:22:69.23:0,69,1131	1/1:2,11:13:26.68:363,27,0	1/1:0,18:18:54.12:733,54,0	1/1:0,30:29:72.24:1056,72,0	1/1:1,13:14:21.07:309,21,0
chr10	94414157	.	A	AGATAGATA	9684.10	PASS	AB=1.000;AC=45;AF=0.833;AN=54;BaseQRankSum=-2.533;DP=461;FS=3.093;HRun=0;HaplotypeScore=142.1362;InbreedingCoeff=0.4693;MQ=61.85;MQ0=1;MQRankSum=-3.523;QD=24.45;ReadPosRankSum=3.047;VQSLOD=4.0633;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:27.02:444,27,0	1/1:2,0:2:6:96,6,0	1/1:9,0:7:0.89:2,1,0	./.	1/1:28,0:28:54.16:1071,54,0	1/1:20,0:20:30.05:702,30,0	1/1:5,0:5:3.01:51,3,0	1/1:33,0:32:16.38:104,16,0	1/1:10,0:10:15.04:229,15,0	1/1:17,0:17:36.11:987,36,0	1/1:25,0:25:12.03:228,12,0	1/1:4,0:4:6.02:243,6,0	1/1:24,0:24:33.03:933,33,0	1/1:17,0:17:24.07:528,24,0	1/1:18,0:18:27.09:601,27,0	1/1:12,0:11:9.02:156,9,0	1/1:21,0:21:36.08:536,36,0	0/1:8,0:8:30.04:66,0,30	0/1:14,0:14:9.94:10,0,182	0/0:27,0:27:34.88:0,35,596	0/0:8,0:8:12.91:0,13,205	1/1:5,0:5:12.04:456,12,0	1/1:15,0:15:27.08:726,27,0	1/1:10,0:11:3.01:50,3,0	1/1:29,0:29:48.14:1061,48,0	0/1:29,0:29:39.80:40,0,744	0/0:22,0:22:27.56:0,28,518	1/1:11,4:18:9.03:365,9,0
chr10	94414407	.	GA	G	9559.83	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=9.457;DP=673;FS=13.863;HRun=9;HaplotypeScore=86.2316;InbreedingCoeff=0.9885;MQ=72.94;MQ0=1;MQRankSum=-2.342;QD=22.23;ReadPosRankSum=1.857;VQSLOD=4.4733;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,23:30:56.69:580,57,0	1/1:1,5:6:15.01:137,15,0	0/0:35,1:29:9.33:0,9,328	0/0:44,0:34:28.02:0,28,317	1/1:4,25:29:68.99:631,69,0	0/0:27,0:27:78.23:0,78,900	0/0:9,0:9:21.05:0,21,232	1/1:11,26:36:73.91:696,74,0	1/1:1,28:29:84.04:769,84,0	1/1:2,22:24:63.03:576,63,0	1/1:3,20:23:57.02:521,57,0	0/0:17,0:17:45.13:0,45,519	0/0:17,0:17:48.14:0,48,554	0/0:30,0:30:87.26:0,87,1004	1/1:1,25:26:66.03:604,66,0	1/1:1,9:10:27.01:247,27,0	1/1:6,29:35:43.42:652,43,0	1/1:2,15:17:42.02:384,42,0	1/1:4,19:23:54.02:494,54,0	1/1:2,27:29:81.04:741,81,0	1/1:1,18:19:36.01:330,36,0	0/0:12,0:12:33.10:0,33,381	0/0:19,0:19:53.23:0,53,618	0/0:28,0:30:80.27:0,80,868	1/1:3,19:22:54.03:494,54,0	1/1:1,22:23:60.03:549,60,0	1/1:1,26:27:66.04:604,66,0	1/1:0,21:21:60.03:549,60,0
chr10	94414822	.	AT	A	4228.20	PASS	AB=0.968;AC=37;AF=0.661;AN=56;BaseQRankSum=1.890;DP=447;FS=7.180;HRun=2;HaplotypeScore=85.4344;InbreedingCoeff=-0.1352;MQ=63.20;MQ0=0;MQRankSum=-3.253;QD=10.02;ReadPosRankSum=-0.793;VQSLOD=2.0694;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:17,1:18:10.50:128,0,11	1/1:6,0:6:14.96:120,15,0	0/0:19,0:12:8.73:0,9,192	0/0:6,0:5:8.69:0,9,68	1/1:21,0:21:44.80:349,45,0	0/1:19,0:19:22.85:68,0,23	0/1:14,1:15:7.73:104,0,8	1/1:0,11:11:33.09:411,33,0	1/1:9,0:9:20.91:161,21,0	1/1:23,0:23:50.16:375,50,0	1/1:24,0:24:53.80:428,54,0	0/1:18,1:19:15.60:95,0,16	0/1:14,0:14:6.16:6,0,31	0/1:18,0:18:15.71:77,0,16	1/1:13,0:13:35.87:279,36,0	1/1:12,0:12:32.88:257,33,0	0/1:10,1:11:21.56:36,0,22	1/1:8,0:8:14.93:116,15,0	0/1:9,0:9:4.85:27,0,5	0/1:33,2:35:32.80:105,0,33	0/1:13,1:14:17.31:27,0,17	0/1:15,2:17:1.62:95,0,2	0/1:22,0:22:3.37:106,0,3	0/1:15,0:15:11.52:34,0,12	1/1:21,0:21:41.87:330,42,0	0/1:20,0:20:17.53:18,0,25	0/1:16,0:16:30.46:30,0,61	1/1:1,11:12:36.10:445,36,0
chr10	94414823	.	TTAA	T	5576.88	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=-9.550;DP=450;FS=9.782;HRun=0;HaplotypeScore=93.5456;InbreedingCoeff=0.5136;MQ=63.48;MQ0=0;MQRankSum=-0.749;QD=21.96;ReadPosRankSum=1.336;VQSLOD=3.9280;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:22.29:22,0,386	1/1:0,6:6:15.05:272,15,0	0/0:20,0:12:23.26:0,23,324	0/0:5,0:4:8.76:0,9,153	1/1:0,21:21:45.06:776,45,0	0/1:19,0:19:17.33:17,0,450	0/1:16,0:16:2.30:2,0,333	0/0:12,0:12:26.33:0,26,106	1/1:0,8:8:21.07:374,21,0	1/1:0,21:22:60:894,60,0	1/1:0,23:24:59.90:961,60,0	0/0:20,0:20:7.62:0,8,474	0/0:12,0:16:41.84:0,42,428	0/1:19,0:19:26.06:26,0,399	1/1:0,11:13:36.12:608,36,0	1/1:0,11:12:33.11:574,33,0	0/0:12,0:12:11.16:0,11,258	1/1:0,7:8:15.05:250,15,0	0/1:8,0:9:2.73:3,0,180	0/0:33,0:33:17.30:0,17,730	0/0:13,0:14:41.07:0,41,397	0/1:17,0:17:30.09:30,0,323	0/1:21,0:23:9.51:10,0,460	0/0:14,0:14:13.11:0,13,317	1/1:0,19:19:42.14:757,42,0	0/0:19,0:19:54.47:0,54,530	0/0:18,0:18:15.16:0,15,489	0/0:12,0:13:13.11:0,13,81
chr10	94415708	.	TA	T	3630.67	PASS	AB=0.769;AC=10;AF=0.179;AN=56;BaseQRankSum=6.342;DP=534;FS=0.819;HRun=2;HaplotypeScore=59.4287;InbreedingCoeff=0.7546;MQ=75.64;MQ0=0;MQRankSum=1.850;QD=26.50;ReadPosRankSum=-0.916;VQSLOD=2.9884;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.72:0,73,1074	0/0:9,0:9:27.08:0,27,382	0/0:17,0:15:20.15:0,20,360	0/0:13,0:12:29.70:0,30,367	0/0:25,0:25:72.19:0,72,1013	0/0:19,0:19:57.15:0,57,791	0/0:12,0:12:33.05:0,33,411	0/1:27,0:27:60.48:156,0,60	0/0:14,0:14:39.13:0,39,583	0/0:26,0:26:78.23:0,78,1105	0/0:19,0:19:51.17:0,51,761	0/0:18,0:18:54.14:0,54,745	0/0:25,0:25:75.22:0,75,1060	0/0:19,0:19:57.18:0,57,831	0/0:17,0:17:48.09:0,48,652	0/0:17,0:17:51.17:0,51,762	0/0:20,0:20:28.40:0,28,196	0/0:15,0:15:36.09:0,36,515	1/1:2,21:23:57.09:643,57,0	1/1:1,29:30:87.09:1040,87,0	1/1:0,14:14:39.13:505,39,0	0/0:15,0:15:45.14:0,45,654	0/0:21,0:21:63.20:0,63,907	0/0:11,0:11:26.89:0,27,383	0/0:29,0:29:87.29:0,87,1282	0/1:3,18:21:65.93:620,0,66	1/1:1,21:22:53.39:667,53,0	0/0:11,0:11:28.34:0,28,107
chr10	94417144	.	G	GA	543.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.043;DP=501;FS=7.588;HRun=9;HaplotypeScore=55.7145;InbreedingCoeff=0.7940;MQ=55.32;MQ0=12;MQRankSum=1.197;QD=18.10;ReadPosRankSum=1.803;VQSLOD=3.7405;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:30:37.11:638,37,0	0/0:7,0:7:18:0,18,156	0/0:20,0:4:6:0,6,50	0/0:19,0:3:5.78:0,6,36	0/0:18,0:18:35.55:0,36,311	0/0:12,0:11:26.99:0,27,234	0/0:23,0:23:44.95:0,45,390	0/0:29,0:25:44.23:0,44,383	0/0:12,0:12:29.99:0,30,260	0/0:18,0:17:38.97:0,39,337	0/0:14,0:14:35.99:0,36,312	0/0:14,0:14:35.99:0,36,313	0/0:13,0:13:20.99:0,21,181	0/0:18,0:19:41.02:0,41,344	0/0:16,0:15:38.99:0,39,338	0/0:12,0:13:35.01:0,35,289	0/0:32,0:31:71.95:0,72,625	0/0:29,0:30:71.01:0,71,605	0/0:13,0:12:26.97:0,27,232	0/0:22,0:22:38.97:0,39,338	0/0:11,0:10:17.99:0,18,156	0/0:14,0:14:29.99:0,30,260	0/0:15,0:15:32.99:0,33,286	0/0:13,0:12:29.99:0,30,260	0/0:12,0:12:29.97:0,30,257	0/0:20,0:19:44.98:0,45,390	0/0:33,0:33:74.97:0,75,651	0/0:8,0:8:14.98:0,15,130
chr10	94417775	.	A	AC	56.52	PASS	AB=0.859;AC=4;AF=0.071;AN=56;BaseQRankSum=4.182;DP=368;FS=6.077;HRun=0;HaplotypeScore=41.1903;InbreedingCoeff=-0.0798;MQ=62.51;MQ0=21;MQRankSum=-3.712;QD=1.31;ReadPosRankSum=-3.141;VQSLOD=-0.1150;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:66.18:0,66,901	0/0:3,0:2:6.02:0,6,84	0/0:7,0:4:11.04:0,11,101	0/0:11,0:7:16.60:0,17,197	0/0:8,0:7:15.05:0,15,210	0/0:14,0:14:42.14:0,42,584	0/0:25,0:24:63.13:0,63,859	0/0:28,0:27:78.23:0,78,1066	0/0:13,0:13:39.13:0,39,543	0/0:13,0:13:39.13:0,39,543	0/1:7,2:9:70.95:71,0,212	0/0:4,0:3:9.03:0,9,125	0/1:4,2:6:68.80:69,0,111	0/1:13,1:13:1.51:2,0,385	0/1:13,1:13:14.24:14,0,386	0/0:8,0:7:21.07:0,21,294	0/0:30,1:29:42.85:0,43,994	0/0:20,1:17:51.16:0,51,685	0/0:17,0:14:39.09:0,39,523	0/0:15,1:15:39.13:0,39,545	0/0:12,0:11:30.10:0,30,419	0/0:4,0:3:9.03:0,9,126	0/0:7,0:6:18.02:0,18,229	0/0:12,0:12:33.06:0,33,422	0/0:6,0:6:18.06:0,18,250	0/0:12,0:12:36.08:0,36,481	0/0:18,0:17:48.16:0,48,669	0/0:10,0:10:30.04:0,30,379
chr10	94417865	.	GA	G	1041.59	PASS	AB=0.734;AC=10;AF=0.179;AN=56;BaseQRankSum=8.863;DP=444;FS=4.148;HRun=10;HaplotypeScore=46.1774;InbreedingCoeff=0.6646;MQ=58.37;MQ0=29;MQRankSum=0.980;QD=11.45;ReadPosRankSum=-0.626;VQSLOD=2.3767;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,2:33:32.07:0,32,787	0/0:8,0:6:18.02:0,18,187	0/0:16,0:6:11.92:0,12,106	0/0:8,0:4:2.34:0,2,58	0/0:16,1:16:6.40:0,6,279	0/0:9,0:7:21.06:0,21,232	0/0:18,0:17:45.08:0,45,484	0/0:25,1:26:43.05:0,43,681	0/1:11,1:12:7.61:8,0,148	0/0:12,0:11:22.30:0,22,235	0/0:11,0:10:24.06:0,24,265	0/0:13,0:13:36.06:0,36,385	0/0:12,0:11:21.05:0,21,225	0/0:18,0:17:30.08:0,30,332	0/0:29,0:28:69.15:0,69,744	0/0:14,0:12:33.06:0,33,353	0/0:35,0:30:63.16:0,63,688	0/0:32,0:26:72.19:0,72,795	1/1:7,15:20:14.57:341,15,0	1/1:4,11:14:1.87:233,2,0	1/1:4,12:14:23.99:208,24,0	0/0:4,0:4:9.02:0,9,100	0/0:6,0:6:15.04:0,15,166	0/0:14,1:14:4.49:0,4,265	0/0:11,0:11:29.11:0,29,305	0/1:2,10:12:0.22:223,0,0	1/1:5,9:13:20.99:182,21,0	0/0:5,0:5:9.02:0,9,100
chr10	94418117	.	AT	A	6963.55	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=11.814;DP=479;FS=0.409;HRun=8;HaplotypeScore=68.6214;InbreedingCoeff=0.9402;MQ=74.27;MQ0=7;MQRankSum=1.387;QD=23.85;ReadPosRankSum=0.028;VQSLOD=5.3994;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.25:0,90,1055	1/1:0,6:6:15.02:145,15,0	0/0:37,0:17:13.97:0,14,115	0/0:27,1:12:6.45:0,6,80	1/1:0,17:17:51.04:482,51,0	0/0:15,0:15:45.14:0,45,539	0/0:8,0:8:18.05:0,18,207	1/1:5,22:27:65.87:578,66,0	1/1:0,10:10:21.03:202,21,0	1/1:2,16:16:48.06:458,48,0	1/1:1,12:13:35.93:325,36,0	0/0:14,0:13:33.09:0,33,383	0/0:26,0:26:66.20:0,66,787	0/0:15,0:14:39.12:0,39,467	1/1:2,15:17:42.07:405,42,0	1/1:0,18:18:39.06:376,39,0	1/1:2,22:24:60.09:578,60,0	1/1:2,11:12:30.04:289,30,0	1/1:5,15:20:42.05:398,42,0	1/1:0,20:20:60.03:567,60,0	1/1:1,8:9:12.02:115,12,0	0/0:3,0:3:9.03:0,9,108	0/0:7,0:7:21.05:0,21,238	0/0:1,0:1:3.01:0,3,36	1/1:0,21:21:48.08:463,48,0	1/1:2,27:28:81.11:771,81,0	1/1:2,16:18:48.08:463,48,0	1/1:0,12:12:36.06:347,36,0
chr10	94418768	.	TG	T	9084.28	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=11.346;DP=428;FS=33.381;HRun=1;HaplotypeScore=87.9658;InbreedingCoeff=0.9946;MQ=68.09;MQ0=0;MQRankSum=-8.323;QD=34.67;ReadPosRankSum=-0.634;VQSLOD=2.4687;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,11:13:36.03:457,36,0	1/1:0,6:6:18.06:250,18,0	0/0:10,0:9:27.09:0,27,404	0/0:15,0:14:27.53:0,28,448	1/1:2,19:21:50.29:482,50,0	0/0:17,0:17:51.17:0,51,763	0/0:12,0:12:36.10:0,36,518	1/1:0,24:24:72.19:925,72,0	1/1:1,8:9:27.07:357,27,0	1/1:3,17:20:60.19:803,60,0	1/1:0,21:21:57.29:618,57,0	0/0:23,0:23:69.23:0,69,1031	0/0:24,0:24:72.18:0,72,1048	0/0:20,0:20:60.17:0,60,855	1/1:2,21:23:65.77:668,66,0	1/1:1,9:10:27.09:375,27,0	0/0:14,0:14:38.99:0,39,500	1/1:0,13:13:33.11:458,33,0	1/1:0,22:22:66.18:854,66,0	1/1:0,10:10:29.97:352,30,0	1/1:2,7:9:21:226,21,0	0/0:7,0:7:21.07:0,21,314	0/0:13,0:13:39.12:0,39,564	0/0:11,0:11:33.09:0,33,473	1/1:3,13:16:45.09:561,45,0	1/1:0,23:23:69.13:914,69,0	1/1:0,17:17:48.07:624,48,0	1/1:3,2:5:15.02:160,15,0
chr10	94418796	.	C	CTGTG	10002.16	PASS	AB=0.667;AC=35;AF=0.625;AN=56;BaseQRankSum=-3.244;DP=601;FS=62.168;HRun=0;HaplotypeScore=157.9165;InbreedingCoeff=0.8888;MQ=60.91;MQ0=8;MQRankSum=-6.467;QD=28.50;ReadPosRankSum=-3.293;VQSLOD=2.1220;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,8:20:14.99:271,15,0	1/1:2,8:10:15.05:376,15,0	0/0:36,0:28:19.39:0,19,536	0/0:29,0:15:12.01:0,12,146	1/1:11,18:29:33.03:613,33,0	0/0:27,0:27:72.25:0,72,1218	0/0:20,0:20:50.75:0,51,842	1/1:21,12:33:48.15:1071,48,0	1/1:2,7:10:17.85:388,18,0	1/1:7,18:27:60.21:1442,60,0	1/1:7,13:20:9.01:226,9,0	0/0:31,0:31:84.29:0,84,1433	0/0:27,0:27:75.26:0,75,1279	0/0:30,0:33:93.27:0,93,1459	1/1:8,19:27:24.06:548,24,0	1/1:1,11:12:24.08:601,24,0	0/1:7,1:14:32.77:143,0,33	1/1:6,9:16:38.60:740,39,0	1/1:8,9:18:32.58:653,33,0	1/1:3,11:14:15.05:347,15,0	1/1:18,21:40:9.20:296,9,0	0/0:15,0:15:36.12:0,36,609	0/0:11,0:11:27.09:0,27,460	0/0:19,0:19:54.18:0,54,907	1/1:2,13:15:15.05:376,15,0	1/1:9,12:21:39.12:927,39,0	1/1:10,6:17:35.80:607,36,0	1/1:0,7:7:15.05:376,15,0
chr10	94418881	.	C	CGTGT	8200.37	PASS	AB=0.956;AC=33;AF=0.589;AN=56;BaseQRankSum=-3.906;DP=702;FS=10.552;HRun=0;HaplotypeScore=131.4191;InbreedingCoeff=0.7044;MQ=51.27;MQ0=14;MQRankSum=-1.488;QD=20.97;ReadPosRankSum=0.494;VQSLOD=3.9168;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:2.98:65,3,0	1/1:7,2:9:14.65:345,15,0	0/0:45,0:8:8.89:0,9,65	0/0:51,0:10:3.39:0,3,51	1/1:4,16:24:32.85:756,33,0	0/0:21,0:22:45.14:0,45,698	0/0:36,0:36:72.22:0,72,1150	0/1:10,0:27:20.81:21,0,179	1/1:2,18:20:42.14:1041,42,0	1/1:17,6:24:35.84:698,36,0	1/1:4,4:9:17.81:376,18,0	0/0:27,0:27:54.17:0,54,873	0/0:20,0:24:63.19:0,63,981	0/0:25,0:26:60.19:0,60,983	1/1:1,15:23:38.34:781,38,0	1/1:3,11:14:27.09:669,27,0	0/1:11,0:13:30.92:116,0,31	1/1:3,20:25:45.15:1114,45,0	1/1:18,0:17:22.79:241,23,0	1/1:2,0:18:7:29,7,0	1/1:74,0:74:20.70:209,21,0	0/0:6,0:6:12.03:0,12,175	0/0:17,0:18:44.91:0,45,714	0/0:54,0:54:99:0,138,2109	1/1:7,14:21:17.79:728,18,0	1/1:15,0:20:39.21:554,39,0	1/1:20,0:22:32.97:443,33,0	0/1:1,0:5:12.92:13,0,47
chr10	94419789	.	AACACACACACAC	A	1912.13	PASS	AB=0.817;AC=22;AF=0.440;AN=50;BaseQRankSum=6.439;DP=398;FS=5.420;HRun=0;HaplotypeScore=138.3541;InbreedingCoeff=0.2897;MQ=57.55;MQ0=9;MQRankSum=-6.317;QD=10.45;ReadPosRankSum=-0.285;VQSLOD=2.2658;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:12.04:0,12,470	0/1:8,0:11:36.36:37,0,36	./.	./.	0/0:10,0:16:0.80:0,1,47	1/1:15,4:19:6.02:185,6,0	0/1:12,2:14:99:196,0,137	./.	0/1:6,0:8:1.17:1,0,37	0/0:7,0:10:6.92:0,7,138	1/1:8,0:12:1.55:4,2,0	1/1:6,3:9:6.02:205,6,0	1/1:6,3:9:9.03:239,9,0	1/1:7,8:15:18.06:616,18,0	1/1:10,0:12:4.66:11,5,0	1/1:10,0:11:3.01:84,3,0	0/0:13,0:19:26.12:0,26,807	0/0:13,0:13:3.99:0,4,79	0/0:14,0:14:11.07:0,11,342	0/0:10,0:12:15.05:0,15,580	0/0:31,0:29:30.10:0,30,1234	0/1:10,3:14:26.05:196,0,26	1/1:13,0:13:3:25,3,0	0/1:16,2:19:10:177,0,10	0/1:12,1:16:93.71:94,0,99	0/0:19,0:19:24.08:0,24,977	0/0:8,0:7:6.02:0,6,151	0/0:4,0:5:9.03:0,9,176
chr10	94421137	.	G	GCA	255.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.741;DP=747;FS=0.000;HRun=0;HaplotypeScore=128.7948;InbreedingCoeff=0.9890;MQ=73.27;MQ0=0;MQRankSum=-1.902;QD=6.24;ReadPosRankSum=-4.025;VQSLOD=2.1804;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,129,1820	0/0:11,0:11:30.10:0,30,429	0/0:39,0:37:87.25:0,87,1180	0/0:30,0:30:48.83:0,49,851	0/0:15,0:15:39.13:0,39,552	0/0:20,0:20:57.15:0,57,791	0/0:30,0:30:84.25:0,84,1164	0/0:25,0:25:57.12:0,57,753	0/0:28,0:28:78.26:0,78,1112	0/0:27,0:27:72.24:0,72,1031	0/0:16,0:16:48.16:0,48,686	0/0:30,0:30:84.26:0,84,1180	0/0:30,0:30:87.29:0,87,1241	0/0:27,0:27:81.27:0,81,1154	0/0:27,0:27:73.80:0,74,1035	0/0:30,0:30:90.30:0,90,1287	1/1:17,24:41:23.25:349,23,0	0/0:27,0:27:66.22:0,66,932	0/0:20,0:20:51.17:0,51,725	0/0:20,0:20:57.18:0,57,809	0/0:50,0:50:99:0,135,1913	0/0:18,0:18:54.14:0,54,733	0/0:24,0:24:69.23:0,69,983	0/0:35,0:35:99:0,105,1464	0/0:22,0:22:57.19:0,57,816	0/0:26,0:26:69.22:0,69,970	0/0:25,0:25:72.24:0,72,1025	0/0:7,0:7:18.06:0,18,257
chr10	94421661	.	T	TA	7396.44	PASS	AB=0.744;AC=29;AF=0.518;AN=56;BaseQRankSum=-11.108;DP=608;FS=8.633;HRun=10;HaplotypeScore=64.1651;InbreedingCoeff=0.7951;MQ=65.54;MQ0=2;MQRankSum=0.955;QD=19.88;ReadPosRankSum=2.232;VQSLOD=5.7545;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,21:32:40.63:735,41,0	0/1:6,6:12:18.54:206,0,19	0/1:26,1:14:5.97:6,0,139	0/0:14,0:11:17.90:0,18,146	1/1:2,20:22:62.91:628,63,0	0/0:19,0:19:41.90:0,42,341	0/0:13,0:14:35:0,35,277	0/0:29,0:29:70.91:0,71,570	1/1:1,15:16:33.08:352,33,0	1/1:3,16:19:47.92:476,48,0	1/1:5,18:24:53.97:558,54,0	0/0:19,0:19:50.77:0,51,408	0/0:26,0:26:74.91:0,75,615	0/0:19,0:19:50.91:0,51,417	1/1:3,28:31:38.51:615,39,0	1/1:3,18:21:17.46:391,17,0	0/0:26,0:26:65.88:0,66,537	1/1:2,24:26:54.14:576,54,0	1/1:7,12:19:12.67:316,13,0	1/1:5,21:26:41.51:639,42,0	0/1:5,10:15:16.21:255,0,16	0/0:17,0:17:44.94:0,45,369	0/0:14,0:14:41.83:0,42,335	0/0:29,0:30:65.05:0,65,515	1/1:1,11:12:24.06:256,24,0	1/1:4,33:38:92.89:950,93,0	1/1:10,21:32:19.66:439,20,0	0/0:8,0:8:23.97:0,24,197
chr10	94421811	.	GA	G	3093.54	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-1.082;DP=622;FS=0.761;HRun=10;HaplotypeScore=85.4058;InbreedingCoeff=0.9890;MQ=72.27;MQ0=0;MQRankSum=-0.402;QD=19.58;ReadPosRankSum=4.612;VQSLOD=4.2035;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:25:54.30:0,54,299	0/0:9,0:9:21.06:0,21,232	0/0:7,0:8:11.58:0,12,97	0/0:10,0:10:18.03:0,18,185	0/0:43,1:44:76.20:0,76,1054	1/1:3,18:21:50.99:443,51,0	1/1:2,12:14:29.99:260,30,0	0/0:7,0:34:79.96:0,80,445	0/0:16,0:18:41.93:0,42,436	0/0:29,1:30:49.12:0,49,751	0/0:21,0:21:54.15:0,54,597	1/1:1,16:17:47.99:417,48,0	1/1:3,20:23:50.99:443,51,0	1/1:2,17:19:44.97:391,45,0	0/0:26,0:26:72:0,72,761	0/0:14,0:15:35.93:0,36,379	0/0:23,1:25:42.95:0,43,675	0/0:24,0:24:71.94:0,72,742	0/0:3,0:16:35.73:0,36,189	0/0:5,0:32:69.59:0,70,390	0/0:2,0:13:31.68:0,32,169	1/1:0,15:15:38.99:339,39,0	1/1:2,27:29:74.96:651,75,0	1/1:3,17:20:14.83:358,15,0	0/0:23,1:24:25.04:0,25,480	0/0:6,0:33:61.30:0,61,425	0/0:3,0:33:71.68:0,72,368	0/0:4,0:23:51.64:0,52,295
chr10	94426098	.	GA	G	888.57	PASS	AB=0.795;AC=17;AF=0.304;AN=56;BaseQRankSum=-0.340;DP=459;FS=14.236;HRun=15;HaplotypeScore=80.1292;InbreedingCoeff=0.2219;MQ=51.20;MQ0=13;MQRankSum=-0.271;QD=3.80;ReadPosRankSum=2.161;VQSLOD=-0.2634;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:51.11:0,51,256	0/0:12,0:12:8.83:0,9,65	0/0:9,0:3:0.50:0,0,6	0/0:11,0:5:3.44:0,3,22	0/1:14,2:15:15.42:15,0,129	0/0:13,0:19:20.82:0,21,141	0/0:1,0:10:5.62:0,6,28	1/1:8,13:21:32.95:210,33,0	0/1:12,3:16:34.62:35,0,126	0/0:27,0:29:40.07:0,40,357	0/1:19,1:20:18.30:18,0,124	0/0:8,0:13:8.72:0,9,54	0/0:3,0:13:14.36:0,14,82	0/0:11,1:13:6.93:0,7,124	0/1:7,2:9:17.63:18,0,101	0/1:16,3:20:9.44:9,0,187	0/1:21,9:27:49.53:50,0,356	0/1:12,2:12:2.01:2,0,113	0/1:7,7:15:0.27:114,0,0	0/1:6,8:14:8.62:78,0,9	0/0:4,0:3:0:0,0,0	0/0:11,0:16:13.58:0,14,101	0/0:10,1:14:14.83:0,15,84	0/0:3,0:5:9.57:0,10,57	0/0:15,0:15:16.11:0,16,166	1/1:10,6:18:6.97:90,7,0	1/1:5,18:24:38.35:250,38,0	1/1:3,7:12:27.67:165,28,0
chr10	94426099	.	A	AAG	589.13	PASS	AB=0.946;AC=8;AF=0.143;AN=56;BaseQRankSum=2.257;DP=471;FS=13.438;HRun=0;HaplotypeScore=100.0164;InbreedingCoeff=-0.1653;MQ=51.26;MQ0=13;MQRankSum=-0.732;QD=4.71;ReadPosRankSum=2.591;VQSLOD=1.1604;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,23:29:14.06:586,0,14	0/0:13,0:13:19.74:0,20,234	0/1:11,0:3:15.05:15,0,26	0/0:11,0:5:2.81:0,3,17	0/0:17,0:15:31.67:0,32,311	0/1:20,0:19:34.66:35,0,157	0/1:11,0:11:9.22:9,0,27	0/0:23,0:22:22.27:0,22,332	0/0:16,0:16:39.03:0,39,439	0/0:31,0:29:56.90:0,57,616	0/0:23,0:22:42.88:0,43,442	0/0:15,0:14:2.94:0,3,137	0/1:13,0:13:14.64:15,0,56	0/0:15,0:13:16.40:0,16,214	0/0:9,0:9:19.61:0,20,246	0/0:19,0:19:48:0,48,512	0/0:32,0:28:66.20:0,66,900	0/0:14,0:12:21.69:0,22,265	0/0:17,0:17:38.82:0,39,371	0/0:15,0:15:29.90:0,30,278	0/0:4,0:3:8.92:0,9,62	0/1:16,0:15:26.90:27,0,152	0/1:19,0:15:25.98:26,0,114	0/1:5,0:5:6.15:6,0,51	0/0:15,0:15:22.40:0,22,284	0/0:19,0:19:23.38:0,23,284	0/0:24,0:24:41.80:0,42,416	0/0:13,0:12:30.04:0,30,294
chr10	94426408	.	T	TTGAAATGTCCTTTGCTCC	2476.56	PASS	AB=0.800;AC=37;AF=0.974;AN=38;BaseQRankSum=-1.644;DP=44;FS=0.000;HRun=0;HaplotypeScore=27.3810;InbreedingCoeff=-0.1486;MQ=120.32;MQ0=0;MQRankSum=-1.288;QD=57.59;ReadPosRankSum=-1.200;VQSLOD=2.3059;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:11.99:193,12,0	1/1:1,0:1:3.01:89,3,0	1/1:2,0:5:9.03:378,9,0	0/1:3,1:4:9.08:507,0,9	./.	1/1:1,0:1:3.01:50,3,0	1/1:1,0:1:2.98:22,3,0	1/1:3,0:3:6.02:109,6,0	./.	1/1:2,0:2:6.02:156,6,0	./.	./.	1/1:1,0:1:3.01:95,3,0	1/1:4,0:4:11.92:137,12,0	1/1:3,0:3:8.99:146,9,0	./.	1/1:1,0:1:2.97:20,3,0	1/1:1,0:1:2.98:22,3,0	1/1:1,0:1:3.01:68,3,0	./.	1/1:4,0:4:11.97:136,12,0	1/1:1,0:1:2.98:21,3,0	1/1:1,0:1:3.01:96,3,0	./.	1/1:3,0:3:8.99:208,9,0	1/1:1,0:1:3.01:104,3,0	./.	./.
chr10	94427353	.	A	AAT	7667.79	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-14.689;DP=620;FS=4.696;HRun=0;HaplotypeScore=70.5726;InbreedingCoeff=0.9971;MQ=78.53;MQ0=1;MQRankSum=-2.214;QD=37.77;ReadPosRankSum=2.630;VQSLOD=6.9951;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.19:0,57,733	1/1:4,9:13:21.07:354,21,0	0/0:16,0:17:24.08:0,24,335	0/0:12,0:12:18.02:0,18,213	1/1:2,25:27:63.15:1030,63,0	0/0:17,0:17:45.14:0,45,567	0/0:7,0:7:21.06:0,21,258	0/0:29,0:29:63.20:0,63,811	1/1:1,20:22:54.18:910,54,0	1/1:2,22:24:69.24:1161,69,0	1/1:2,21:23:57.20:961,57,0	0/0:18,0:18:51.15:0,51,642	0/0:31,0:31:84.25:0,84,1045	0/0:25,0:25:72.23:0,72,915	1/1:3,13:17:30.10:506,30,0	1/1:0,16:15:39.13:658,39,0	1/1:4,0:20:30.02:267,30,0	1/1:1,18:19:51.17:859,51,0	0/0:26,0:26:69.20:0,69,861	0/0:42,0:42:99:0,117,1465	0/0:21,0:21:51.16:0,51,656	0/0:19,0:19:51.16:0,51,644	0/0:19,0:19:48.16:0,48,617	0/0:18,0:18:45.15:0,45,578	1/1:2,19:22:57.20:961,57,0	0/0:40,1:41:60.73:0,61,1338	0/0:28,0:28:72.23:0,72,926	0/0:25,0:25:63.20:0,63,811
chr10	94428658	.	C	CGGG	882.59	PASS	AB=1.000;AC=13;AF=0.250;AN=52;BaseQRankSum=2.793;DP=333;FS=8.751;HRun=2;HaplotypeScore=60.9152;InbreedingCoeff=0.7477;MQ=49.30;MQ0=16;MQRankSum=-4.090;QD=19.61;ReadPosRankSum=1.648;VQSLOD=0.2937;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:10:12:0,12,171	0/0:10,0:10:18.06:0,18,299	0/0:9,0:5:9.01:0,9,95	./.	0/0:17,0:16:36.11:0,36,577	1/1:2,6:7:15.05:322,15,0	0/1:10,0:10:11.95:115,0,12	0/0:17,0:15:45.04:0,45,611	0/0:18,0:18:45.09:0,45,671	0/0:16,0:15:42.14:0,42,675	0/0:17,0:16:42.13:0,42,661	1/1:7,0:7:6.02:119,6,0	1/1:0,3:2:3.01:54,3,0	./.	0/0:19,0:19:48.16:0,48,773	0/0:17,0:17:45.15:0,45,714	0/0:10,0:8:15.04:0,15,221	0/0:6,0:5:15.05:0,15,250	0/0:15,0:15:27.08:0,27,416	0/0:18,0:16:42.01:0,42,601	0/0:12,0:12:31.35:0,31,501	1/1:2,2:3:6.02:136,6,0	1/1:1,5:5:12.04:254,12,0	1/1:3,4:6:3.01:42,3,0	0/0:12,0:12:33.10:0,33,516	0/0:19,0:19:45.06:0,45,655	0/0:13,0:13:27.29:0,27,472	0/0:15,0:13:26.92:0,27,384
chr10	94429454	.	CAGGA	C	7623.04	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=9.076;DP=698;FS=15.348;HRun=0;HaplotypeScore=104.7611;InbreedingCoeff=0.7669;MQ=56.65;MQ0=12;MQRankSum=3.311;QD=15.56;ReadPosRankSum=2.411;VQSLOD=3.7364;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:72.46:214,0,72	1/1:6,8:14:5.49:66,5,0	0/0:32,0:9:18:0,18,262	0/0:48,0:17:12.58:0,13,245	1/1:7,18:24:35.83:457,36,0	1/1:8,10:18:15.05:246,15,0	1/1:8,20:28:11.71:426,12,0	1/1:17,10:26:24.04:309,24,0	1/1:7,17:24:24.08:396,24,0	1/1:12,14:26:30.56:645,31,0	1/1:6,15:21:38.79:482,39,0	1/1:4,17:21:18.06:297,18,0	1/1:2,21:23:27.09:445,27,0	1/1:3,19:22:30.10:495,30,0	1/1:8,14:21:21.07:345,21,0	1/1:5,23:28:24.08:396,24,0	0/1:14,0:38:8.29:8,0,285	1/1:3,9:11:12.04:198,12,0	0/0:20,0:19:24.04:0,24,410	0/0:14,0:13:36.02:0,36,615	0/0:38,0:38:90.16:0,90,1664	1/1:7,11:18:20.80:255,21,0	1/1:4,8:12:11.74:165,12,0	1/1:9,29:36:51.17:841,51,0	1/1:7,19:26:36.12:590,36,0	0/0:28,0:28:70.03:0,70,1217	0/0:27,1:28:4.56:0,5,886	1/1:3,7:10:21.07:346,21,0
chr10	94429668	.	CCATA	C	5001.76	PASS	AB=0.899;AC=24;AF=0.462;AN=52;BaseQRankSum=2.481;DP=688;FS=12.546;HRun=0;HaplotypeScore=137.6024;InbreedingCoeff=0.6043;MQ=61.08;MQ0=14;MQRankSum=-1.375;QD=15.73;ReadPosRankSum=1.642;VQSLOD=3.9230;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:21.07:0,21,478	1/1:5,3:8:12.04:185,12,0	./.	./.	1/1:21,9:30:24.08:370,24,0	0/0:28,0:26:39.13:0,39,876	0/0:28,0:28:12.04:0,12,267	1/1:22,0:21:3.01:44,3,0	1/1:15,13:28:45.15:675,45,0	0/1:26,11:35:86.55:616,0,87	1/1:16,11:26:33.11:508,33,0	0/1:23,2:25:59.30:59,0,594	0/0:30,0:37:48.16:0,48,847	0/1:18,1:19:16.13:16,0,530	1/1:16,14:30:48.12:711,48,0	1/1:12,13:28:48.11:659,48,0	0/1:17,1:18:25.14:25,0,369	1/1:6,6:12:4.11:304,4,0	0/0:17,0:19:12.04:0,12,192	0/0:23,0:31:21.04:0,21,322	0/0:17,0:22:8.90:0,9,149	0/0:32,0:32:48.16:0,48,1077	0/0:21,0:22:11.47:0,11,808	0/0:21,0:21:18.06:0,18,421	1/1:12,13:24:45.15:691,45,0	0/0:22,0:28:39.13:0,39,731	0/0:12,0:25:21.07:0,21,365	1/1:6,3:9:9.03:139,9,0
chr10	94429741	.	CCA	C	10258.44	PASS	AB=0.923;AC=43;AF=0.768;AN=56;BaseQRankSum=12.422;DP=737;FS=1.164;HRun=0;HaplotypeScore=179.5657;InbreedingCoeff=0.8466;MQ=63.54;MQ0=4;MQRankSum=-8.065;QD=18.03;ReadPosRankSum=1.084;VQSLOD=5.1260;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,28:36:40.02:924,40,0	1/1:3,0:11:22.73:112,23,0	0/1:33,3:28:59.01:59,0,541	0/0:29,0:28:47.89:0,48,701	1/1:3,0:31:40.10:238,40,0	1/1:4,26:28:60.19:733,60,0	1/1:5,15:20:45.14:550,45,0	1/1:8,21:29:60.17:721,60,0	1/1:10,0:24:31.25:154,31,0	1/1:6,0:42:89.33:433,89,0	1/1:6,0:19:34.09:168,34,0	1/1:1,21:22:57.18:697,57,0	1/1:6,26:32:81.24:977,81,0	1/1:3,25:28:68.88:820,69,0	1/1:7,0:33:64.07:308,64,0	1/1:8,0:40:79.54:391,80,0	1/1:3,21:24:60.19:733,60,0	1/1:7,0:9:2.84:14,3,0	0/0:19,0:19:14.84:0,15,695	0/0:31,2:33:35.58:0,36,1080	0/0:21,1:22:8.49:0,8,644	1/1:5,24:29:63.20:770,63,0	1/1:5,14:19:42.13:511,42,0	1/1:3,6:9:12.04:147,12,0	1/1:9,0:23:37.46:176,37,0	0/0:28,0:28:72.20:0,72,1140	0/0:36,1:37:53.62:0,54,1348	1/1:2,19:20:51.16:623,51,0
chr10	94431462	.	GT	G	3820.08	PASS	AB=0.600;AC=17;AF=0.304;AN=56;BaseQRankSum=2.976;DP=529;FS=5.326;HRun=9;HaplotypeScore=71.8435;InbreedingCoeff=0.9135;MQ=67.32;MQ0=1;MQRankSum=-1.520;QD=22.74;ReadPosRankSum=3.081;VQSLOD=4.6740;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,100,1124	0/1:3,6:9:13.61:144,0,14	0/0:14,0:13:30.05:0,30,323	0/0:13,0:11:13.45:0,13,278	1/1:4,23:27:66.03:601,66,0	0/0:21,0:22:66.03:0,66,742	0/0:18,0:18:45.13:0,45,519	0/0:12,0:29:56.85:0,57,289	1/1:0,19:19:48.03:439,48,0	1/1:4,20:24:60.03:549,60,0	1/1:0,20:20:57.03:522,57,0	0/0:19,0:19:57.14:0,57,644	0/0:20,0:20:51.15:0,51,588	0/0:18,0:18:48.14:0,48,554	1/1:1,27:28:72.04:659,72,0	1/1:0,13:13:33.02:302,33,0	0/0:3,0:23:48.33:0,48,245	1/1:4,10:14:24.01:220,24,0	0/0:15,0:28:43.97:0,44,265	0/0:5,0:15:28.67:0,29,153	0/0:2,0:12:25.73:0,26,142	0/0:7,0:7:21.06:0,21,242	0/0:18,0:18:51.14:0,51,578	0/0:17,0:17:48.12:0,48,538	1/1:0,14:14:42.02:384,42,0	0/0:3,0:25:59.01:0,59,292	0/0:3,0:14:31.21:0,31,158	0/0:4,0:12:20.85:0,21,130
chr10	94432091	.	TA	T	4195.41	PASS	AB=0.571;AC=23;AF=0.411;AN=56;BaseQRankSum=-0.468;DP=506;FS=6.553;HRun=11;HaplotypeScore=69.4853;InbreedingCoeff=0.9147;MQ=69.83;MQ0=0;MQRankSum=-2.194;QD=18.01;ReadPosRankSum=2.315;VQSLOD=4.8607;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:24:48.48:0,48,251	1/1:0,6:6:17.98:148,18,0	0/0:17,0:15:29.28:0,29,284	0/0:11,0:10:9.62:0,10,81	1/1:4,22:26:53.90:443,54,0	0/0:3,0:19:37.19:0,37,198	0/0:2,0:12:22.79:0,23,114	1/1:5,17:22:45.77:365,46,0	1/1:1,13:14:35.23:294,35,0	1/1:3,16:20:49.93:394,50,0	1/1:5,27:33:47.94:590,48,0	0/0:2,0:7:14.68:0,15,72	0/0:2,0:18:45.59:0,46,229	0/0:7,0:17:32.80:0,33,172	1/1:1,19:21:49.98:400,50,0	1/1:3,10:14:26.01:203,26,0	0/1:5,15:20:13.01:318,0,13	1/1:2,11:13:26.96:222,27,0	0/0:20,0:20:45.09:0,45,467	0/0:29,0:29:63.15:0,63,665	0/0:14,0:14:42.11:0,42,448	0/0:3,0:18:42.95:0,43,233	0/0:5,0:20:40.10:0,40,223	0/0:1,0:12:31.42:0,31,174	1/1:3,27:31:79.94:646,80,0	0/0:14,1:15:14.44:0,14,347	0/0:18,1:19:23.46:0,23,441	1/1:2,11:13:20.96:172,21,0
chr10	94432401	.	C	CAAA	3976.15	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=5.350;DP=591;FS=3.126;HRun=7;HaplotypeScore=166.7713;InbreedingCoeff=0.8835;MQ=65.97;MQ0=1;MQRankSum=-0.686;QD=16.92;ReadPosRankSum=-2.812;VQSLOD=-0.5416;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:25,7:32:66.06:1002,66,0	1/1:3,0:3:8.85:56,9,0	0/0:44,0:26:3.17:0,3,276	0/0:29,0:17:13.20:0,13,135	1/1:24,0:24:53.13:358,53,0	0/0:27,0:27:66.18:0,66,762	0/0:15,0:15:29.66:0,30,390	0/0:19,0:19:27:0,27,319	1/1:18,0:18:47.29:334,47,0	1/1:28,0:28:55.16:411,55,0	1/1:24,0:24:46.20:335,46,0	0/0:18,0:18:42.10:0,42,488	0/0:32,0:32:69.12:0,69,776	0/0:23,0:23:54.13:0,54,612	1/1:28,0:28:73.81:495,74,0	1/1:28,0:28:70.62:497,71,0	0/0:10,0:10:27.08:0,27,336	1/1:16,0:16:34.60:226,35,0	0/0:17,0:17:18.05:0,18,463	0/0:23,0:23:32.86:0,33,404	0/0:13,0:13:21.04:0,21,264	0/0:17,0:17:38.94:0,39,448	0/0:20,0:20:36.66:0,37,437	0/0:20,0:20:48.12:0,48,548	1/1:18,0:18:35.36:253,35,0	0/1:16,0:16:10.11:10,0,285	0/0:25,0:26:56.89:0,57,642	0/0:3,0:3:9.02:0,9,99
chr10	94432408	.	AGG	A	6691.35	PASS	AB=0.739;AC=51;AF=0.911;AN=56;BaseQRankSum=-0.130;DP=579;FS=15.884;HRun=13;HaplotypeScore=131.5324;InbreedingCoeff=0.7169;MQ=67.46;MQ0=1;MQRankSum=-2.227;QD=13.17;ReadPosRankSum=5.603;VQSLOD=1.9140;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,1:25:31.31:183,31,0	1/1:0,4:4:11.81:99,12,0	0/0:38,0:20:24.06:0,24,273	0/0:31,0:17:21:0,21,248	1/1:3,18:23:50.63:431,51,0	1/1:6,0:27:49.37:214,49,0	1/1:4,0:13:22.12:101,22,0	1/1:5,2:16:24.66:108,25,0	1/1:9,0:19:43.05:223,43,0	1/1:9,15:30:58.06:451,58,0	1/1:5,17:24:56.16:481,56,0	1/1:3,0:16:33.05:146,33,0	1/1:6,0:30:60.25:271,60,0	1/1:3,0:25:43.91:190,44,0	1/1:5,21:27:65.61:601,66,0	1/1:7,17:26:56.40:512,56,0	1/1:5,0:12:13.86:64,14,0	1/1:3,11:14:32.56:314,33,0	0/1:11,6:17:40.22:150,0,40	1/1:8,13:22:38.62:326,39,0	1/1:8,9:17:8.96:87,9,0	1/1:2,0:17:39.01:186,39,0	1/1:3,0:20:38.68:175,39,0	1/1:3,0:18:41.40:193,41,0	1/1:0,14:17:44.43:381,44,0	1/1:6,12:18:33.03:316,33,0	1/1:7,18:28:53.22:454,53,0	1/1:0,0:3:8.23:36,8,0
chr10	94432419	.	GGGA	G	2060.44	PASS	AB=0.988;AC=23;AF=0.411;AN=56;BaseQRankSum=1.934;DP=562;FS=38.982;HRun=0;HaplotypeScore=147.4557;InbreedingCoeff=-0.1407;MQ=66.80;MQ0=1;MQRankSum=-1.893;QD=5.30;ReadPosRankSum=7.896;VQSLOD=0.8303;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:48.03:48,0,93	0/1:5,0:5:11.46:11,0,21	0/0:33,0:15:36.06:0,36,503	0/0:28,0:14:31.18:0,31,421	0/1:24,0:24:43.96:97,0,44	0/1:26,0:26:41.90:220,0,42	0/1:13,0:13:65.44:110,0,65	0/0:23,0:23:30.50:0,31,326	0/1:20,0:20:38.75:39,0,53	0/1:33,0:33:27.60:28,0,237	0/1:20,0:20:8.57:52,0,9	0/1:16,0:16:9.92:170,0,10	0/1:27,2:29:2.50:328,0,3	0/1:26,1:27:45.99:218,0,46	0/1:26,0:26:19.39:19,0,49	0/1:22,0:22:2.02:2,0,36	1/1:8,0:8:0.57:86,1,0	0/0:13,0:13:5.86:0,6,40	0/0:15,0:15:43.37:0,43,394	0/0:24,0:24:18.09:0,18,211	0/0:16,0:16:23.22:0,23,160	1/1:15,0:15:40.28:243,40,0	1/1:18,2:20:17.63:266,18,0	0/1:19,1:20:37.38:223,0,37	1/1:17,0:17:3.27:40,3,0	0/0:15,0:15:1.41:0,1,91	0/1:25,1:26:25.55:26,0,102	0/0:6,0:6:11.72:0,12,76
chr10	94432564	.	A	AC	6449.91	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=4.710;DP=637;FS=16.757;HRun=2;HaplotypeScore=79.8840;InbreedingCoeff=0.9768;MQ=85.74;MQ0=0;MQRankSum=-1.492;QD=36.86;ReadPosRankSum=4.484;VQSLOD=3.4052;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:63.66:0,64,763	1/1:1,5:6:15.05:216,15,0	0/0:22,0:22:60.05:0,60,708	0/0:22,0:22:58.69:0,59,674	1/1:1,12:13:30.10:431,30,0	0/0:32,0:32:93.28:0,93,1138	0/0:23,0:23:60.19:0,60,741	0/0:30,0:30:87.27:0,87,1075	1/1:0,25:25:72.24:1037,72,0	1/1:5,16:21:48.16:687,48,0	1/1:0,10:10:24.08:346,24,0	0/0:21,0:21:60.19:0,60,744	0/0:26,0:26:75.24:0,75,929	0/0:31,0:31:90.28:0,90,1114	1/1:1,27:28:72.20:1013,72,0	1/1:0,34:34:96.32:1382,96,0	0/0:25,0:25:72.23:0,72,892	1/1:1,21:22:54.18:778,54,0	0/0:17,0:17:51.16:0,51,632	0/0:21,0:21:57.18:0,57,706	0/0:39,0:39:99:0,108,1327	0/0:30,0:30:90.10:0,90,1079	0/0:22,0:22:60.19:0,60,744	0/0:29,0:29:84.26:0,84,1041	1/1:0,16:15:39.13:561,39,0	0/0:18,1:19:7.94:0,8,551	0/0:22,0:21:63.20:0,63,779	0/0:3,0:3:9.03:0,9,112
chr10	94432580	.	GCTTCCCAACCTTTTTGCTGACCC	G	1400.35	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.805;DP=591;FS=1.328;HRun=0;HaplotypeScore=358.1200;InbreedingCoeff=0.8768;MQ=83.44;MQ0=0;MQRankSum=-4.726;QD=87.52;ReadPosRankSum=0.645;VQSLOD=2.6040;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,10:16:23.24:1493,23,0	0/0:4,0:4:12:0,12,960	0/0:18,0:18:39.13:0,39,2078	0/0:19,0:19:45.62:0,46,2461	0/0:13,0:13:36.12:0,36,3256	0/0:31,0:31:90.31:0,90,8909	0/0:27,0:27:81.27:0,81,7845	0/0:23,0:23:54.17:0,54,3649	0/0:27,0:27:81.28:0,81,8127	0/0:20,0:20:57.20:0,57,5698	0/0:9,0:9:27.08:0,27,2507	0/0:16,0:16:45.15:0,45,4620	0/0:27,0:27:78.27:0,78,7260	0/0:27,0:27:78.27:0,78,8038	0/0:26,0:26:75.26:0,75,7030	0/0:27,0:27:78.26:0,78,6919	0/0:23,0:23:66.23:0,66,7007	0/0:22,0:22:57.20:0,57,5048	0/0:16,0:16:48.15:0,48,3811	0/0:22,0:22:60.21:0,60,5533	0/0:37,0:37:99:0,102,9876	0/0:25,0:25:69.24:0,69,5907	0/0:22,0:22:63.20:0,63,5651	0/0:38,0:38:99:0,111,11246	0/0:12,0:11:33.11:0,33,3001	0/0:16,0:16:45.15:0,45,3313	0/0:26,0:25:78.27:0,78,7318	0/0:2,0:2:6.02:0,6,478
chr10	94432729	.	C	CTGT	1502.39	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.669;DP=636;FS=23.089;HRun=0;HaplotypeScore=86.4315;InbreedingCoeff=0.9689;MQ=69.53;MQ0=2;MQRankSum=-3.365;QD=36.64;ReadPosRankSum=1.131;VQSLOD=2.1382;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,35:40:78.27:1597,78,0	0/0:5,0:5:15.01:0,15,198	0/0:38,0:34:62.99:0,63,823	0/0:31,0:27:60.04:0,60,825	0/0:23,0:23:66.22:0,66,970	0/0:28,0:28:66.21:0,66,956	0/0:24,0:24:57.19:0,57,832	0/0:27,0:27:54.10:0,54,692	0/0:18,0:18:48.14:0,48,689	0/0:25,0:25:66.19:0,66,938	0/0:11,0:11:33.10:0,33,470	0/0:20,0:20:48.15:0,48,689	0/0:29,0:29:75.25:0,75,1108	0/0:25,0:25:57.04:0,57,791	0/0:21,0:21:48.15:0,48,682	0/0:23,0:23:63.21:0,63,923	0/0:34,0:35:96.26:0,96,1373	0/0:19,0:18:54.18:0,54,796	0/0:22,0:22:39.10:0,39,531	0/0:17,0:17:39.12:0,39,557	0/0:23,0:23:57.19:0,57,835	0/0:23,0:23:57.16:0,57,805	0/0:27,0:27:66.21:0,66,956	0/0:25,0:25:69.23:0,69,1023	0/0:16,0:15:42.14:0,42,619	0/0:15,0:15:45.15:0,45,667	0/0:19,0:19:57.19:0,57,844	0/0:6,0:6:15.05:0,15,222
chr10	94432873	.	C	CGGG	1101.44	PASS	AB=1.000;AC=12;AF=0.250;AN=48;BaseQRankSum=5.226;DP=310;FS=1.770;HRun=2;HaplotypeScore=71.6525;InbreedingCoeff=0.6636;MQ=53.83;MQ0=13;MQRankSum=-1.933;QD=15.09;ReadPosRankSum=0.235;VQSLOD=0.5862;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,9:29:66.22:1057,66,0	./.	0/1:17,0:3:5.47:5,0,20	0/0:10,0:6:6.93:0,7,56	0/1:6,0:5:0.02:0,0,0	0/0:18,0:18:45.14:0,45,685	0/0:18,0:17:39.13:0,39,620	0/0:18,0:18:45.08:0,45,672	1/1:3,0:2:3.01:44,3,0	1/1:7,0:6:3.01:49,3,0	./.	0/0:6,0:6:15.05:0,15,240	0/0:10,0:10:24.04:0,24,363	0/0:11,0:11:27.09:0,27,426	1/1:3,0:4:3.01:41,3,0	./.	0/0:21,0:20:51.16:0,51,771	1/1:3,0:4:3.01:41,3,0	0/0:10,0:10:21.07:0,21,339	0/0:16,0:16:30.10:0,30,468	0/0:9,0:8:8.51:0,9,99	0/0:16,0:16:36.03:0,36,485	0/0:14,0:15:36.12:0,36,573	0/0:20,0:19:45.15:0,45,704	./.	0/0:8,0:8:21.07:0,21,344	0/0:15,0:15:36.12:0,36,576	0/0:7,0:6:15.05:0,15,236
chr10	94433011	.	A	AC	4037.92	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=0.774;DP=500;FS=15.828;HRun=5;HaplotypeScore=73.3601;InbreedingCoeff=0.9676;MQ=86.76;MQ0=0;MQRankSum=-0.879;QD=30.36;ReadPosRankSum=2.661;VQSLOD=2.6760;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:96.20:0,96,1012	1/1:2,4:6:15.04:184,15,0	0/0:23,0:23:57.12:0,57,597	0/0:17,0:17:42.36:0,42,428	1/1:3,20:23:51.17:666,51,0	0/0:20,0:20:54.08:0,54,566	0/0:18,0:19:50.16:0,50,522	0/0:20,0:20:51.13:0,51,547	1/1:2,12:14:36.07:449,36,0	1/1:3,10:14:33.04:396,33,0	1/1:3,13:16:39.04:490,39,0	0/0:19,0:19:57.11:0,57,601	0/0:13,0:13:39.10:0,39,419	0/0:15,0:15:39.08:0,39,410	1/1:3,12:15:33.11:431,33,0	1/1:1,7:7:15.05:197,15,0	0/0:27,0:27:78.15:0,78,819	1/1:0,20:20:57.19:750,57,0	0/0:15,0:14:36.09:0,36,387	0/0:14,0:14:36.09:0,36,387	0/0:31,0:31:84.21:0,84,903	0/0:21,0:21:63.14:0,63,668	0/0:11,0:11:27.07:0,27,290	0/0:21,0:21:54.09:0,54,568	1/1:4,13:16:36.12:474,36,0	0/0:17,0:17:51.13:0,51,548	0/0:22,0:22:60.07:0,60,619	0/0:3,0:3:3.01:0,3,32
chr10	94433591	.	AT	A	445.08	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.611;DP=479;FS=12.071;HRun=4;HaplotypeScore=70.4558;InbreedingCoeff=0.9250;MQ=62.34;MQ0=0;MQRankSum=0.391;QD=27.82;ReadPosRankSum=-0.593;VQSLOD=1.9873;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:45.14:540,45,0	0/0:6,0:6:15.05:0,15,209	0/0:10,0:10:24.08:0,24,310	0/0:3,0:3:9.03:0,9,125	0/0:31,0:31:78.26:0,78,1087	0/0:20,0:20:57.18:0,57,779	0/0:12,0:12:33.11:0,33,462	0/0:38,0:38:87.22:0,87,1218	0/0:9,0:9:27.09:0,27,377	0/0:27,0:27:81.27:0,81,1130	0/0:18,0:18:51.16:0,51,695	0/0:17,0:17:51.17:0,51,710	0/0:13,0:13:39.13:0,39,546	0/0:12,0:12:36.12:0,36,504	0/0:15,0:15:45.15:0,45,629	0/0:11,0:11:33.11:0,33,461	0/0:11,0:11:23.05:0,23,261	0/0:10,0:10:30.08:0,30,401	0/0:15,0:15:39.12:0,39,532	0/0:28,0:28:78.26:0,78,1092	0/0:11,0:11:33.11:0,33,462	0/0:14,0:14:42.14:0,42,588	0/0:15,0:15:45.15:0,45,630	0/0:15,0:15:42.14:0,42,588	0/0:15,0:15:45.15:0,45,630	0/0:33,0:33:90.30:0,90,1260	0/0:32,0:32:90.28:0,90,1242	0/0:22,0:22:66.22:0,66,924
chr10	94433606	.	T	TAAAAATAAAACTGTGGGGGAGGGGGA	36336.42	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=8.835;DP=518;FS=1.714;HRun=0;HaplotypeScore=339.9349;InbreedingCoeff=0.8657;MQ=62.71;MQ0=0;MQRankSum=-14.551;QD=169.80;ReadPosRankSum=0.353;VQSLOD=4.1378;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:39.13:0,39,2510	1/1:2,1:3:6.02:719,6,0	0/0:11,0:11:15.04:0,15,391	0/0:3,0:3:9.03:0,9,312	1/1:32,2:38:69.06:6074,69,0	0/0:19,0:19:54.19:0,54,3262	0/0:10,0:10:24.08:0,24,1632	0/0:25,0:25:52.99:0,53,2862	1/1:15,2:17:48.16:4981,48,0	1/1:27,2:33:72.22:6424,72,0	1/1:18,0:18:30.02:1970,30,0	0/0:17,0:17:42.14:0,42,2623	0/0:13,0:13:36.11:0,36,1954	0/0:18,0:18:42.14:0,42,2639	1/1:21,4:26:66.23:5876,66,0	1/1:20,0:20:54.19:5407,54,0	0/0:9,0:9:2.79:0,3,210	1/1:14,1:14:26.28:2121,26,0	0/0:13,0:13:27.08:0,27,1281	0/0:28,0:28:69.22:0,69,3693	0/0:15,0:15:42.13:0,42,2362	0/0:14,0:14:36.12:0,36,2168	0/0:19,0:19:36.12:0,36,2105	0/0:18,0:18:45.14:0,45,2762	1/1:13,2:16:27.09:2477,27,0	0/1:28,0:28:99:289,0,3793	0/0:33,0:33:81.26:0,81,4726	0/0:23,0:23:63.22:0,63,3813
chr10	94433926	.	A	ACAGGACAATAGACTAT	22501.59	PASS	AB=0.909;AC=19;AF=0.339;AN=56;BaseQRankSum=-2.152;DP=679;FS=0.000;HRun=0;HaplotypeScore=285.7364;InbreedingCoeff=0.9109;MQ=73.42;MQ0=0;MQRankSum=-16.710;QD=108.18;ReadPosRankSum=0.288;VQSLOD=4.1886;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,5408	1/1:3,3:8:15.05:1039,15,0	0/0:19,0:19:57.17:0,57,2126	0/0:18,0:18:48.10:0,48,1805	1/1:5,7:14:12:320,12,0	0/0:28,0:28:81.28:0,81,3753	0/0:29,0:29:87.30:0,87,3917	0/0:31,0:31:93.30:0,93,3204	1/1:11,16:28:51.18:3386,51,0	1/1:10,15:27:72.25:4723,72,0	1/1:7,10:19:21.03:788,21,0	0/0:32,0:32:96.29:0,96,3739	0/0:24,0:24:69.24:0,69,2754	0/0:26,0:26:78.27:0,78,3622	1/1:12,16:32:63.18:4352,63,0	1/1:9,13:27:66.23:4678,66,0	0/0:24,0:24:72.22:0,72,3353	1/1:4,4:9:18.06:1368,18,0	0/0:15,0:15:45.15:0,45,1769	0/0:26,0:26:75.24:0,75,3428	0/0:50,0:50:99:0,150,6767	0/0:17,0:17:51.18:0,51,2338	0/0:28,0:28:81.26:0,81,3706	0/0:21,0:21:63.20:0,63,2647	1/1:7,6:14:30.06:1449,30,0	0/1:27,3:30:99:397,0,3697	0/0:32,0:30:96.31:0,96,4280	0/0:10,0:10:30.10:0,30,1467
chr10	94434319	.	C	CA	9784.65	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=0.709;DP=729;FS=2.445;HRun=1;HaplotypeScore=90.0612;InbreedingCoeff=0.9977;MQ=86.24;MQ0=0;MQRankSum=-3.751;QD=42.18;ReadPosRankSum=2.962;VQSLOD=5.1591;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:66.22:978,66,0	1/1:0,16:16:45.15:674,45,0	0/0:35,0:35:99:0,105,1293	0/0:27,0:27:75.24:0,75,963	1/1:0,29:29:84.24:1234,84,0	0/0:20,0:20:60.20:0,60,779	0/0:16,0:16:48.13:0,48,594	0/0:29,0:29:78.25:0,78,1001	1/1:0,19:19:57.19:854,57,0	1/1:1,28:29:84.27:1233,84,0	1/1:0,27:27:69.23:1034,69,0	0/0:30,0:30:90.26:0,90,1138	0/0:26,0:26:75.24:0,75,973	0/0:21,0:21:63.18:0,63,801	1/1:1,22:23:66.22:989,66,0	1/1:0,19:19:54.18:810,54,0	0/0:29,0:29:87.28:0,87,1128	1/1:1,11:12:30.10:449,30,0	0/0:21,0:21:60.19:0,60,766	0/0:32,0:32:93.29:0,93,1189	0/0:43,0:43:99:0,117,1503	0/0:23,0:23:66.21:0,66,857	0/0:23,0:23:66.21:0,66,857	0/0:36,0:35:99:0,105,1363	1/1:0,34:34:99:1529,102,0	0/0:20,1:21:15.22:0,15,695	0/0:49,0:48:99:0,147,1907	0/0:16,0:16:48.10:0,48,589
chr10	94434597	.	T	TA	10367.34	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=6.126;DP=594;FS=4.780;HRun=1;HaplotypeScore=82.1376;InbreedingCoeff=0.9970;MQ=73.71;MQ0=0;MQRankSum=-0.754;QD=43.20;ReadPosRankSum=3.300;VQSLOD=4.9976;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:81.18:1279,81,0	1/1:0,12:12:36.12:576,36,0	0/0:14,0:14:42.12:0,42,556	0/0:13,0:11:30.08:0,30,395	1/1:0,30:30:84.29:1343,84,0	0/0:29,0:29:75.22:0,75,1014	0/0:8,0:8:18.53:0,19,253	0/0:20,0:20:60.19:0,60,823	1/1:1,19:20:42.14:671,42,0	1/1:1,21:22:57.18:888,57,0	1/1:0,23:23:63.16:1007,63,0	0/0:20,0:20:54.17:0,54,737	0/0:18,0:18:36.08:0,36,475	0/0:15,0:15:36.12:0,36,503	1/1:0,28:28:84.29:1343,84,0	1/1:0,19:19:54.18:863,54,0	0/0:21,0:21:57.19:0,57,793	1/1:0,21:21:57.19:910,57,0	0/0:22,0:22:60.19:0,60,823	0/0:33,0:33:99:0,99,1344	0/0:12,0:12:21.07:0,21,294	0/0:21,0:21:63.15:0,63,842	0/0:24,0:24:72.23:0,72,990	0/0:16,0:16:45.15:0,45,628	1/1:1,32:33:93.32:1487,93,0	0/0:21,1:22:18.24:0,18,833	0/0:30,0:30:65.86:0,66,856	0/0:16,0:16:48.16:0,48,671
chr10	94435650	.	GT	G	3487.08	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.998;DP=516;FS=18.478;HRun=5;HaplotypeScore=108.4981;InbreedingCoeff=0.9972;MQ=69.44;MQ0=3;MQRankSum=-9.802;QD=18.07;ReadPosRankSum=-2.223;VQSLOD=1.8702;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:40.62:180,41,0	1/1:12,0:12:26.68:227,27,0	0/0:28,0:20:45.19:0,45,475	0/0:21,0:15:36.11:0,36,470	1/1:33,0:33:68.67:593,69,0	0/0:16,0:16:42.11:0,42,543	0/0:11,0:11:30.08:0,30,380	0/0:35,0:35:75.18:0,75,937	1/1:12,1:13:32.99:294,33,0	1/1:15,3:18:47.66:358,48,0	1/1:23,0:23:50.89:460,51,0	0/0:14,0:14:42.14:0,42,571	0/0:18,0:18:48.16:0,48,655	0/0:15,0:15:42.13:0,42,560	1/1:13,1:14:38.72:308,39,0	1/1:12,1:13:35.35:270,35,0	1/1:16,0:15:31.44:131,31,0	1/1:8,2:8:14.93:125,15,0	0/0:23,0:23:57.18:0,57,766	0/0:17,0:17:48.15:0,48,640	0/0:17,0:17:45.14:0,45,599	0/0:19,0:19:54.18:0,54,737	0/0:17,0:17:51.17:0,51,697	0/0:11,0:10:33.11:0,33,451	1/1:22,1:23:63.31:540,63,0	0/0:20,0:20:60.12:0,60,766	0/0:26,0:26:75.23:0,75,1002	0/0:15,0:15:39.13:0,39,533
chr10	94435654	.	TTG	T	6856.94	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=11.231;DP=519;FS=18.679;HRun=0;HaplotypeScore=108.3142;InbreedingCoeff=0.9673;MQ=69.83;MQ0=3;MQRankSum=-10.506;QD=35.90;ReadPosRankSum=-2.449;VQSLOD=4.4862;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:47.44:730,47,0	1/1:0,12:12:27.09:401,27,0	0/0:33,0:23:40.13:0,40,796	0/0:23,0:15:42.06:0,42,717	1/1:0,31:31:72.01:957,72,0	0/0:16,0:16:45.13:0,45,841	0/0:11,0:11:33.09:0,33,598	0/0:31,0:31:81.22:0,81,1471	1/1:5,7:12:33.11:491,33,0	1/1:10,8:18:51.12:751,51,0	1/1:1,22:23:54.07:748,54,0	0/0:14,0:14:42.14:0,42,851	0/0:18,0:18:51.16:0,51,994	0/0:15,0:15:42.14:0,42,832	1/1:6,9:15:41.17:577,41,0	1/1:4,9:13:36.10:503,36,0	1/1:1,14:14:36.12:563,36,0	1/1:5,5:8:1.25:205,1,0	0/0:22,0:22:63.03:0,63,1165	0/0:17,0:17:51.16:0,51,998	0/0:18,0:18:48.15:0,48,918	0/0:18,0:18:54.19:0,54,1091	0/0:19,0:19:57.18:0,57,1102	0/0:11,0:10:33.11:0,33,670	1/1:9,15:24:64.31:929,64,0	0/0:20,0:20:60.17:0,60,1172	0/0:27,0:27:78.20:0,78,1520	0/0:15,0:15:39.13:0,39,790
chr10	94435661	.	TG	T	1958.90	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.463;DP=526;FS=12.410;HRun=1;HaplotypeScore=126.3236;InbreedingCoeff=0.9746;MQ=64.39;MQ0=3;MQRankSum=-9.899;QD=11.73;ReadPosRankSum=-5.887;VQSLOD=-0.3810;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:26.64:0,27,254	1/1:10,3:13:31.43:180,31,0	0/0:36,0:22:5.60:0,6,368	0/0:25,0:15:27.88:0,28,295	1/1:27,3:30:68.13:370,68,0	0/0:16,0:16:45.11:0,45,550	0/0:10,0:10:30.08:0,30,373	0/0:24,0:24:58.48:0,58,402	1/1:14,0:14:31.06:176,31,0	1/1:16,3:19:49:317,49,0	1/1:22,1:23:53.69:298,54,0	0/0:15,0:15:45.11:0,45,547	0/0:17,0:17:44.49:0,44,522	0/0:16,0:16:45.03:0,45,529	1/1:13,3:16:36.83:209,37,0	1/1:12,3:15:33.28:210,33,0	0/0:16,0:15:34.84:0,35,180	1/1:10,0:8:10.26:63,10,0	0/0:22,0:22:62.12:0,62,451	0/0:17,0:17:50.04:0,50,332	0/0:19,0:19:46.81:0,47,275	0/0:17,0:17:42.32:0,42,590	0/0:21,0:21:59.95:0,60,681	0/0:9,0:8:26.98:0,27,311	1/1:26,0:27:67.23:349,67,0	0/0:19,0:19:55.83:0,56,356	0/0:27,0:27:76.32:0,76,473	0/0:15,0:15:37.91:0,38,216
chr10	94435662	.	G	GT	3875.86	PASS	AB=0.883;AC=38;AF=0.679;AN=56;BaseQRankSum=-0.442;DP=534;FS=19.462;HRun=10;HaplotypeScore=124.8689;InbreedingCoeff=0.6016;MQ=64.19;MQ0=2;MQRankSum=-4.095;QD=9.57;ReadPosRankSum=-4.726;VQSLOD=-0.2327;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:2.12:13,2,0	1/1:13,0:13:16.01:71,16,0	0/0:37,0:24:9.54:0,10,163	0/1:28,0:16:8.56:9,0,134	1/1:31,0:31:27.55:96,28,0	0/0:16,0:16:41.93:0,42,341	0/0:10,0:10:29.96:0,30,246	1/1:8,15:24:17.43:379,17,0	1/1:14,0:14:18.44:70,18,0	1/1:20,0:20:10.33:52,10,0	1/1:23,0:23:23.21:86,23,0	0/0:15,0:15:41.93:0,42,341	0/0:15,0:17:34.99:0,35,277	0/0:15,1:16:3.95:0,4,238	1/1:17,0:17:21.98:89,22,0	1/1:15,0:15:8.31:39,8,0	1/1:15,0:15:6.27:59,6,0	1/1:13,0:11:7.43:23,7,0	0/1:13,8:21:7.12:323,0,7	1/1:4,13:17:39.06:403,39,0	1/1:1,18:19:45.11:479,45,0	0/0:15,1:17:14.98:0,15,319	0/1:18,2:20:16.08:16,0,296	0/1:8,1:8:8.03:8,0,148	1/1:27,0:27:45.37:181,45,0	1/1:2,16:18:48.09:501,48,0	1/1:8,20:28:60.10:622,60,0	1/1:2,13:15:34.90:357,35,0
chr10	94435669	.	TTTTGTTGTTGTTG	T	3874.39	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=13.971;DP=534;FS=0.000;HRun=0;HaplotypeScore=238.8184;InbreedingCoeff=0.9316;MQ=63.40;MQ0=1;MQRankSum=-12.455;QD=17.69;ReadPosRankSum=-10.395;VQSLOD=-0.2008;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,1:18:26.25:187,26,0	1/1:14,0:14:35.87:441,36,0	0/0:37,0:23:50.51:0,51,1635	0/0:29,0:17:34.45:0,34,1267	1/1:25,0:25:45.60:292,46,0	0/0:21,0:21:60.19:0,60,3146	0/0:12,0:12:36.12:0,36,2084	0/0:28,0:28:35.86:0,36,2573	1/1:15,0:15:30.93:220,31,0	1/1:18,0:18:44.82:521,45,0	1/1:23,0:23:30.84:175,31,0	0/0:14,0:14:42.13:0,42,2279	0/0:15,0:15:42.14:0,42,2372	0/0:16,0:16:39.10:0,39,2118	1/1:16,0:16:36.53:296,37,0	1/1:13,0:13:28.56:447,29,0	1/1:16,3:18:35.87:695,36,0	1/1:15,0:13:27.14:255,27,0	0/1:17,0:17:9.56:10,0,1647	0/0:16,0:16:22.41:0,22,1809	0/0:18,0:18:45.02:0,45,2316	0/0:18,0:18:53.85:0,54,2894	0/0:20,0:20:51.11:0,51,2689	0/0:9,0:8:24.06:0,24,1497	1/1:26,0:26:63.70:335,64,0	0/0:18,0:18:22.02:0,22,2122	0/0:29,0:29:52.51:0,53,3717	0/0:15,0:15:36.11:0,36,1801
chr10	94435670	.	TTTGTTGTTGTTG	T	5080.06	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=13.346;DP=533;FS=4.542;HRun=0;HaplotypeScore=224.0097;InbreedingCoeff=0.9166;MQ=63.11;MQ0=1;MQRankSum=-12.086;QD=23.09;ReadPosRankSum=-10.837;VQSLOD=0.9583;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,6:18:47.60:412,48,0	1/1:13,1:14:38.79:531,39,0	0/0:36,0:22:47.93:0,48,1576	0/0:26,0:15:12.58:0,13,1182	1/1:25,0:25:54.69:497,55,0	0/0:21,0:21:60.19:0,60,2948	0/0:13,0:13:39.13:0,39,2038	0/0:26,0:26:20.48:0,20,2370	1/1:15,0:15:32.08:300,32,0	1/1:18,0:18:47.78:673,48,0	1/1:23,0:23:35:254,35,0	0/0:14,0:14:42.11:0,42,2111	0/0:16,0:16:45.15:0,45,2291	0/0:16,0:16:39.09:0,39,2003	1/1:16,0:16:38.29:372,38,0	1/1:13,0:13:31.94:500,32,0	1/1:20,0:19:38.92:616,39,0	1/1:15,0:13:29.92:393,30,0	0/1:17,0:17:25.02:25,0,1503	0/0:16,0:16:22.36:0,22,1666	0/0:19,0:19:47.37:0,47,2211	0/0:18,0:18:40.19:0,40,2671	0/0:19,0:19:51.10:0,51,2510	0/0:9,0:8:24.05:0,24,1394	1/1:26,0:26:70.14:507,70,0	0/0:18,0:18:11.90:0,12,1936	0/0:30,0:30:58.51:0,59,3592	0/0:15,0:15:36.10:0,36,1652
chr10	94435672	.	TGTTGTTG	T	3951.01	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=13.731;DP=500;FS=1.229;HRun=0;HaplotypeScore=166.0456;InbreedingCoeff=0.9182;MQ=61.98;MQ0=1;MQRankSum=-12.783;QD=20.16;ReadPosRankSum=-10.477;VQSLOD=0.3328;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:26.32:175,26,0	1/1:8,2:13:38.43:425,38,0	0/0:33,0:20:48.97:0,49,1097	0/0:26,0:15:28.01:0,28,799	1/1:19,1:25:50.66:382,51,0	0/0:22,0:22:63.20:0,63,2123	0/0:14,0:14:42.14:0,42,1458	0/0:25,0:27:32.08:0,32,1651	1/1:6,4:11:26.39:281,26,0	1/1:7,6:16:44:514,44,0	1/1:16,0:18:30.49:206,30,0	0/0:15,0:15:45.13:0,45,1492	0/0:18,0:18:51.18:0,51,1698	0/0:14,0:14:39.13:0,39,1334	1/1:7,5:15:34.44:277,34,0	1/1:7,3:13:31.29:367,31,0	1/1:16,0:16:37.51:418,38,0	1/1:10,4:13:31.27:410,31,0	0/1:16,0:16:31.61:32,0,1027	0/0:14,0:14:41:0,41,1120	0/0:20,0:20:42.15:0,42,1395	0/0:18,0:18:53.77:0,54,1806	0/0:18,0:18:51.13:0,51,1695	0/0:8,0:7:24.08:0,24,920	1/1:14,5:21:61.03:463,61,0	0/0:17,0:17:9.72:0,10,1198	0/0:27,0:27:58.57:0,59,2311	0/0:12,0:12:35.61:0,36,1002
chr10	94436137	.	TA	T	3191.22	PASS	AB=1.000;AC=31;AF=0.705;AN=44;BaseQRankSum=11.465;DP=286;FS=0.492;HRun=2;HaplotypeScore=75.3356;InbreedingCoeff=0.7622;MQ=74.30;MQ0=2;MQRankSum=-0.331;QD=16.12;ReadPosRankSum=3.048;VQSLOD=3.7604;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,2:25:65.22:490,65,0	1/1:5,1:5:5.20:40,5,0	0/0:6,0:5:12.01:0,12,135	0/1:14,0:9:6.32:6,0,112	1/1:16,0:16:38.60:264,39,0	./.	./.	1/1:0,0:3:9.01:96,9,0	1/1:6,0:6:17.77:118,18,0	1/1:21,1:21:60.35:481,60,0	1/1:20,1:21:53.50:386,54,0	1/1:0,0:3:2.98:21,3,0	./.	./.	1/1:16,1:17:44.63:330,45,0	1/1:10,0:10:23.63:161,24,0	1/1:2,0:7:8.91:65,9,0	1/1:17,0:17:44.30:298,44,0	0/0:18,0:18:54.18:0,54,789	0/0:19,0:19:57.19:0,57,854	0/0:6,0:6:15.05:0,15,220	./.	./.	1/1:0,0:3:0.47:1,0,0	1/1:23,4:27:71.58:579,72,0	0/0:20,0:20:60.18:0,60,856	0/0:18,0:18:51.17:0,51,759	1/1:1,0:1:2.99:23,3,0
chr10	94436138	.	A	AT	6923.05	PASS	AC=28;AF=0.667;AN=42;BaseQRankSum=11.428;DP=283;FS=0.000;HRun=1;HaplotypeScore=59.5903;InbreedingCoeff=0.8810;MQ=71.52;MQ0=2;MQRankSum=-3.902;QD=38.04;ReadPosRankSum=3.023;VQSLOD=5.2663;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:66.01:981,66,0	1/1:1,5:5:9.03:144,9,0	0/0:5,0:4:11.86:0,12,117	0/0:13,0:8:11.63:0,12,131	1/1:0,15:15:39.13:623,39,0	./.	./.	1/1:4,0:4:10.84:121,11,0	1/1:0,6:6:18.06:287,18,0	1/1:2,21:22:62.84:948,63,0	1/1:1,20:21:54.01:829,54,0	1/1:3,0:3:3.01:37,3,0	./.	./.	1/1:1,16:17:45.02:686,45,0	1/1:0,10:10:24.08:383,24,0	1/1:5,2:7:8.99:108,9,0	1/1:0,18:18:45.15:718,45,0	0/0:18,0:18:54.18:0,54,747	0/0:19,0:19:57.19:0,57,796	0/0:6,0:6:15.05:0,15,208	./.	./.	./.	1/1:4,23:27:71.76:1024,72,0	0/0:20,0:20:60.18:0,60,804	0/0:17,0:17:51.17:0,51,710	1/1:0,1:1:3.01:35,3,0
chr10	94436147	.	ACAT	A	40.89	PASS	AB=1.000;AC=9;AF=0.214;AN=42;BaseQRankSum=4.168;DP=295;FS=1.646;HRun=0;HaplotypeScore=101.2191;InbreedingCoeff=0.6637;MQ=67.63;MQ0=1;MQRankSum=-2.767;QD=1.78;ReadPosRankSum=-1.070;VQSLOD=1.9258;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72:0,72,1625	0/0:6,0:5:12.04:0,12,282	0/0:5,0:3:9.03:0,9,156	0/1:12,0:6:4.01:4,0,66	0/0:16,0:16:45.15:0,45,1059	./.	./.	1/1:0,1:1:3.01:52,3,0	0/0:7,0:7:21.07:0,21,504	0/0:25,0:25:72.25:0,72,1725	0/0:24,0:24:69.20:0,69,1462	1/1:2,0:2:3:27,3,0	./.	./.	0/0:16,0:16:48.16:0,48,1161	0/0:13,0:13:39.13:0,39,905	1/1:5,2:7:5.69:52,6,0	0/0:19,0:19:48.08:0,48,1101	0/0:17,0:17:50.19:0,50,1100	0/0:19,0:19:57.20:0,57,1404	0/0:8,0:8:24.08:0,24,534	./.	./.	./.	0/0:24,0:24:72.25:0,72,1744	0/0:27,0:27:81.28:0,81,1938	0/0:18,0:18:54.19:0,54,1319	1/1:1,0:1:2.99:24,3,0
chr10	94436150	.	T	TA	88.20	PASS	AC=6;AF=0.150;AN=40;BaseQRankSum=4.754;DP=306;FS=0.000;HRun=1;HaplotypeScore=94.9926;InbreedingCoeff=0.7657;MQ=68.70;MQ0=1;MQRankSum=-3.564;QD=7.35;ReadPosRankSum=-2.434;VQSLOD=-0.1786;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.22:0,72,985	0/0:8,0:7:15.05:0,15,208	0/0:5,0:3:9:0,9,93	0/0:12,0:7:1.57:0,2,60	0/0:17,0:17:45.15:0,45,627	./.	./.	1/1:4,0:4:10.19:65,10,0	0/0:8,0:8:21.07:0,21,294	0/0:26,0:26:77.98:0,78,1029	0/0:21,0:21:60.20:0,60,831	./.	./.	./.	0/0:18,0:18:48.16:0,48,669	0/0:13,0:13:39.13:0,39,545	1/1:2,5:7:6.02:89,6,0	0/0:19,0:19:45.14:0,45,629	0/0:17,0:17:51.14:0,51,664	0/0:19,0:19:57.19:0,57,797	0/0:8,0:8:24.08:0,24,334	./.	./.	./.	0/0:25,0:25:72.24:0,72,1003	0/0:28,0:28:84.28:0,84,1171	0/0:19,0:19:57.19:0,57,795	1/1:0,1:1:3.01:46,3,0
chr10	94436158	.	A	AT	275.54	PASS	AB=1.000;AC=9;AF=0.214;AN=42;BaseQRankSum=4.517;DP=308;FS=0.000;HRun=1;HaplotypeScore=77.6533;InbreedingCoeff=0.6889;MQ=66.52;MQ0=1;MQRankSum=-4.599;QD=10.60;ReadPosRankSum=-2.347;VQSLOD=0.5711;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.26:0,78,1086	0/0:8,0:7:21.07:0,21,294	0/0:5,0:3:5.99:0,6,63	0/1:10,0:5:15.50:15,0,22	0/0:17,0:17:51.17:0,51,711	./.	1/1:1,0:1:3:28,3,0	1/1:1,4:6:17.65:227,18,0	0/0:7,0:7:21.07:0,21,291	0/0:23,0:23:69.23:0,69,963	0/0:19,0:19:57.18:0,57,780	./.	./.	./.	0/0:16,0:16:48.16:0,48,671	0/0:12,0:12:36.12:0,36,503	1/1:0,6:7:6.02:89,6,0	0/0:22,0:22:51.17:0,51,711	0/0:16,0:16:48.15:0,48,656	0/0:20,0:20:60.20:0,60,836	0/0:7,0:7:21.07:0,21,292	./.	./.	./.	0/0:25,0:25:75.25:0,75,1045	0/0:31,0:31:90.30:0,90,1257	0/0:20,0:20:57.19:0,57,795	1/1:0,1:1:3.01:46,3,0
chr10	94436756	.	GCACACACACATACATACACACA	G	3973.02	PASS	AB=0.792;AC=18;AF=0.321;AN=56;BaseQRankSum=4.848;DP=641;FS=8.298;HRun=0;HaplotypeScore=311.2424;InbreedingCoeff=0.7535;MQ=61.38;MQ0=13;MQRankSum=-3.082;QD=24.08;ReadPosRankSum=-0.387;VQSLOD=0.8475;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:63.21:0,63,1752	0/0:15,0:15:36.12:0,36,1473	0/0:34,0:21:50.72:0,51,774	0/0:43,0:25:56.90:0,57,883	0/0:19,0:19:36.11:0,36,1626	1/1:2,7:10:9.03:329,9,0	0/1:11,0:11:75.93:229,0,76	1/1:15,0:15:33.08:468,33,0	0/0:21,0:21:48.12:0,48,1635	0/0:26,0:26:66.20:0,66,2441	0/0:12,0:12:24.04:0,24,533	1/1:2,20:22:12.04:596,12,0	1/1:1,10:11:3.01:178,3,0	1/1:4,18:22:21.07:985,21,0	0/0:30,0:30:60.62:0,61,1836	0/0:20,0:20:45.08:0,45,1268	0/0:31,0:31:70.85:0,71,3937	0/0:29,0:28:60.13:0,60,2344	0/0:18,0:18:42.06:0,42,1033	0/0:24,0:24:42.14:0,42,1652	0/0:41,0:41:84.67:0,85,3102	1/1:2,17:21:6.02:224,6,0	1/1:1,15:17:5.86:195,6,0	1/1:27,2:29:24.08:460,24,0	0/0:28,0:28:48.15:0,48,2328	0/0:15,0:15:39.13:0,39,1620	0/0:21,0:21:46.02:0,46,1534	0/1:2,0:7:47.74:309,0,48
chr10	94436765	.	CATACAT	C	1665.62	PASS	AB=0.988;AC=27;AF=0.482;AN=56;BaseQRankSum=7.986;DP=628;FS=20.971;HRun=0;HaplotypeScore=162.1853;InbreedingCoeff=0.4072;MQ=56.32;MQ0=16;MQRankSum=-3.767;QD=5.70;ReadPosRankSum=-2.359;VQSLOD=1.1327;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:33.76:0,34,859	0/0:16,0:16:36.12:0,36,545	0/0:30,0:17:50.72:0,51,774	0/0:40,0:22:56.90:0,57,883	0/0:19,0:20:36.08:0,36,529	1/1:8,0:8:8.84:56,9,0	1/1:10,0:10:20.78:282,21,0	1/1:0,11:11:33.10:475,33,0	0/1:20,0:20:18.22:18,0,536	0/0:31,0:30:18.26:0,18,948	0/1:13,0:13:11.42:11,0,230	1/1:20,0:20:11.25:135,11,0	1/1:10,0:10:3.01:48,3,0	1/1:18,0:18:9.39:172,9,0	0/0:34,0:37:26.81:0,27,794	0/1:18,0:18:9.22:9,0,413	0/0:31,0:31:70.06:0,70,1693	0/0:29,0:28:63.04:0,63,805	0/1:19,0:19:61.46:61,0,573	0/1:19,1:21:16.61:17,0,484	0/1:44,0:44:30:30,0,1241	1/1:19,0:19:3.01:47,3,0	1/1:16,0:16:2.36:31,2,0	1/1:23,0:23:24.04:353,24,0	0/0:28,0:28:48.14:0,48,762	0/1:15,0:14:12.71:13,0,652	0/0:27,0:27:41.08:0,41,733	1/1:7,0:7:8.24:102,8,0
chr10	94436771	.	TACAC	T	2695.98	PASS	AB=0.806;AC=43;AF=0.860;AN=50;BaseQRankSum=2.643;DP=630;FS=9.999;HRun=0;HaplotypeScore=143.5384;InbreedingCoeff=0.0604;MQ=52.85;MQ0=18;MQRankSum=-1.394;QD=5.18;ReadPosRankSum=-0.105;VQSLOD=1.8603;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:46:6:54,6,0	1/1:10,7:17:9.03:129,9,0	./.	./.	1/1:15,9:24:2.20:91,2,0	1/1:8,0:8:7.57:80,8,0	1/1:9,0:10:2.65:12,3,0	./.	1/1:16,3:20:14.08:244,14,0	1/1:22,8:29:29.29:374,29,0	0/1:6,5:11:2.55:40,0,3	1/1:20,0:20:8.23:63,8,0	1/1:10,0:10:3:28,3,0	1/1:19,0:18:18.02:130,18,0	1/1:16,18:35:11.86:163,12,0	1/1:14,0:18:15.49:139,15,0	0/0:37,0:36:32.49:0,32,516	1/1:16,13:28:8.88:283,9,0	1/1:19,1:22:4.04:156,4,0	1/1:14,7:23:15.03:177,15,0	1/1:39,4:43:5.76:253,6,0	1/1:19,0:19:5.93:45,6,0	1/1:16,0:16:2.77:17,3,0	1/1:22,0:22:5.23:41,5,0	0/1:14,11:27:9.93:125,0,10	0/1:15,0:14:1.77:62,0,2	0/1:14,11:27:4.53:65,0,5	0/1:7,0:7:10.02:47,0,10
chr10	94438614	.	G	GA	3176.55	PASS	AB=0.703;AC=19;AF=0.339;AN=56;BaseQRankSum=-12.103;DP=520;FS=0.397;HRun=11;HaplotypeScore=65.6502;InbreedingCoeff=0.7489;MQ=82.95;MQ0=0;MQRankSum=-1.220;QD=17.08;ReadPosRankSum=1.340;VQSLOD=4.5809;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:98.48:0,98,760	1/1:4,4:8:9.01:86,9,0	0/0:16,0:19:25.42:0,25,167	0/0:16,0:16:22.02:0,22,153	1/1:7,12:19:9.79:270,10,0	0/0:20,0:21:49.82:0,50,377	0/0:13,0:16:33.92:0,34,244	0/0:23,0:24:53.22:0,53,394	1/1:0,16:16:48.10:487,48,0	0/1:8,14:22:1.49:329,0,1	1/1:2,11:14:35.91:349,36,0	0/0:24,0:25:64.76:0,65,491	0/0:12,0:13:31.92:0,32,238	0/0:17,0:17:41.82:0,42,325	0/1:5,12:18:27.80:277,0,28	1/1:1,11:12:9.83:281,10,0	1/1:2,26:28:55.03:738,55,0	1/1:8,12:21:5.99:275,6,0	0/0:2,0:14:24:0,24,69	0/0:0,0:19:36.66:0,37,106	0/0:2,0:13:22.40:0,22,65	0/0:14,0:16:28.91:0,29,215	0/0:17,3:21:13.39:0,13,275	0/0:12,0:12:23.84:0,24,181	1/1:6,9:17:29.73:272,30,0	0/0:6,0:18:10.82:0,11,50	0/0:3,0:29:53.91:0,54,170	0/1:9,1:11:10.54:11,0,102
chr10	94439661	.	A	AAG	29375.63	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-15.739;DP=765;FS=0.324;HRun=0;HaplotypeScore=76.1943;InbreedingCoeff=0.9967;MQ=67.11;MQ0=4;MQRankSum=-1.865;QD=49.70;ReadPosRankSum=3.039;VQSLOD=5.9730;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,31:35:78.27:1485,78,0	1/1:1,9:10:24.08:463,24,0	0/0:27,0:25:75.25:0,75,1141	0/0:24,0:23:58.70:0,59,847	1/1:3,28:29:72.25:1386,72,0	1/1:1,28:30:75.26:1449,75,0	1/1:0,25:26:72.25:1386,72,0	1/1:5,25:30:81.27:1505,81,0	1/1:3,22:25:69.24:1314,69,0	1/1:2,35:37:99:2072,108,0	1/1:0,21:21:57.20:1101,57,0	1/1:2,17:20:45.15:850,45,0	1/1:3,18:20:54.18:1005,54,0	1/1:1,36:37:99:2028,105,0	1/1:0,32:32:84.29:1623,84,0	1/1:2,21:24:57.19:1101,57,0	1/1:2,40:42:99:2201,114,0	1/1:2,35:39:99:1907,99,0	0/0:17,0:17:45.15:0,45,688	0/0:26,0:26:78.26:0,78,1183	0/0:24,0:24:69.23:0,69,1057	1/1:2,28:29:84.29:1559,84,0	1/1:2,27:29:75.26:1427,75,0	1/1:3,31:35:84.29:1622,84,0	1/1:1,28:30:84.29:1602,84,0	0/0:28,0:28:34.34:0,34,1128	0/0:28,0:28:78.25:0,78,1164	1/1:0,6:6:15.05:290,15,0
chr10	94440825	.	CCA	C	1081.56	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=1.909;DP=321;FS=3.476;HRun=0;HaplotypeScore=47.8724;InbreedingCoeff=0.9061;MQ=87.26;MQ0=7;MQRankSum=2.250;QD=18.03;ReadPosRankSum=1.194;VQSLOD=3.0688;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:19.64:0,20,137	1/1:1,0:1:3:25,3,0	0/0:26,0:22:33.49:0,33,394	0/0:25,0:15:6.51:0,7,161	1/1:8,0:8:23.96:195,24,0	0/0:15,0:15:35.90:0,36,333	0/0:11,0:11:26.90:0,27,218	0/0:11,0:11:26.88:0,27,225	1/1:7,0:7:17.15:141,17,0	1/1:0,8:8:23.96:197,24,0	1/1:10,0:10:26.97:224,27,0	0/0:16,0:15:41.95:0,42,350	0/0:8,0:8:20.94:0,21,166	0/0:10,0:10:23.96:0,24,197	1/1:6,0:5:17.91:142,18,0	1/1:9,0:9:26.83:205,27,0	0/0:14,0:14:32.77:0,33,287	1/1:6,0:6:13.19:112,13,0	0/0:15,0:15:35.42:0,35,289	0/0:21,0:21:49.91:0,50,426	0/0:8,0:8:8.98:0,9,73	0/0:7,0:7:14.95:0,15,118	0/0:11,0:11:29.93:0,30,241	0/0:11,0:10:17.89:0,18,136	1/1:0,5:5:3.01:42,3,0	0/0:14,0:14:38.99:0,39,339	0/0:11,0:11:26.85:0,27,232	0/0:11,0:10:29.85:0,30,227
chr10	94440881	.	AGGGAGGGAGG	A	817.11	PASS	AB=1.000;AC=17;AF=0.340;AN=50;BaseQRankSum=1.260;DP=214;FS=38.200;HRun=0;HaplotypeScore=59.1640;InbreedingCoeff=-0.2186;MQ=34.29;MQ0=22;MQRankSum=0.500;QD=7.30;ReadPosRankSum=-1.140;VQSLOD=0.0375;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:7:8:0,8,91	0/1:3,0:3:23.64:47,0,24	0/0:4,0:1:3.01:0,3,54	./.	./.	0/1:18,0:12:99:291,0,168	0/1:10,0:10:43.79:44,0,90	0/0:15,0:15:36.27:0,36,563	0/0:4,0:3:6.02:0,6,127	0/1:6,0:5:36.54:37,0,46	./.	0/1:5,0:5:41.85:42,0,84	0/0:4,0:3:2.60:0,3,10	0/1:4,0:4:42.01:42,0,121	1/1:4,0:4:2.89:63,3,0	0/0:4,0:2:2.98:0,3,22	0/1:12,0:12:99:154,0,101	1/1:3,0:2:0.47:1,0,0	0/0:11,0:11:31.63:0,32,546	0/1:13,0:11:18.74:19,0,43	0/1:8,0:7:53.49:90,0,53	1/1:13,0:11:3.01:73,3,0	0/0:6,6:11:3.15:0,3,12	0/0:5,0:4:5.98:0,6,61	0/1:8,0:7:31.60:44,0,32	0/0:9,0:8:12.61:0,13,135	0/0:11,0:9:11.78:0,12,163	0/1:5,0:4:10.01:10,0,72
chr10	94440891	.	GGA	G	731.44	PASS	AB=1.000;AC=12;AF=0.240;AN=50;BaseQRankSum=-5.032;DP=263;FS=0.000;HRun=0;HaplotypeScore=53.6832;InbreedingCoeff=0.3851;MQ=48.27;MQ0=19;MQRankSum=2.194;QD=8.51;ReadPosRankSum=2.024;VQSLOD=3.1005;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:7:9.45:0,9,73	0/0:4,0:4:3.47:0,3,26	0/0:12,0:5:5.87:0,6,92	0/0:15,0:3:0.89:0,1,2	0/0:5,0:4:4.20:0,4,28	0/0:19,0:15:3.38:0,3,27	0/0:12,0:12:3.47:0,3,26	0/0:19,0:19:19.74:0,20,180	0/0:5,0:4:0:0,0,0	0/0:6,0:5:6.90:0,7,65	0/0:4,0:2:3:0,3,25	0/0:4,0:4:4.55:0,5,30	0/0:3,0:2:3:0,3,25	1/1:6,0:6:0.24:1,0,0	0/0:6,0:6:3.48:0,3,39	./.	0/1:12,0:13:15.35:15,0,55	0/0:2,0:1:0.89:0,1,2	1/1:9,3:12:24.06:270,24,0	1/1:7,5:10:11.93:102,12,0	1/1:3,6:7:9:104,9,0	0/0:15,0:13:5.99:0,6,51	./.	./.	0/0:11,0:9:4.72:0,5,30	1/1:17,0:16:27.95:321,28,0	0/1:17,0:15:16.02:58,0,16	0/0:7,0:6:13.80:0,14,132
chr10	94442964	.	GGTGTGT	G	1074.95	PASS	AB=0.957;AC=30;AF=0.789;AN=38;BaseQRankSum=3.101;DP=456;FS=3.601;HRun=0;HaplotypeScore=108.7823;InbreedingCoeff=0.1702;MQ=66.04;MQ0=25;MQRankSum=-0.630;QD=4.74;ReadPosRankSum=0.951;VQSLOD=2.0593;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:23:3:25,3,0	1/1:4,0:4:3.01:33,3,0	./.	./.	1/1:14,0:14:7.69:38,8,0	0/1:18,0:15:23.52:24,0,106	./.	./.	1/1:14,0:13:7.26:70,7,0	1/1:10,0:9:6.01:67,6,0	1/1:10,1:9:2.37:8,2,0	1/1:17,0:16:5.62:120,6,0	1/1:7,1:8:12.04:209,12,0	./.	./.	1/1:6,1:7:10.28:155,10,0	0/0:22,0:19:1.56:0,2,256	1/1:17,0:16:5.62:20,6,0	1/1:9,0:8:3:26,3,0	./.	0/0:28,0:25:3.01:0,3,37	./.	0/0:14,1:15:0:0,0,0	1/1:20,0:18:8.21:56,8,0	1/1:23,1:23:11.45:86,11,0	./.	0/1:19,1:21:28.20:120,0,28	1/1:5,0:7:9.03:126,9,0
chr10	94445265	.	T	TACAC	1398.47	PASS	AB=0.907;AC=19;AF=0.380;AN=50;BaseQRankSum=-3.845;DP=474;FS=6.334;HRun=0;HaplotypeScore=108.6394;InbreedingCoeff=0.1497;MQ=59.42;MQ0=21;MQRankSum=3.773;QD=6.11;ReadPosRankSum=-3.412;VQSLOD=0.5902;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:8.76:122,9,0	0/1:6,0:6:4.27:110,0,4	./.	./.	0/1:11,9:22:24.28:315,0,24	0/0:26,0:22:6:0,6,54	0/1:16,0:13:0.12:0,0,0	./.	1/1:14,0:14:9.01:130,9,0	0/1:9,4:15:7.82:279,0,8	0/1:9,2:11:7.10:65,0,7	0/0:14,0:12:5.90:0,6,56	0/0:13,0:13:12:0,12,108	0/0:14,0:12:3:0,3,28	0/1:19,0:19:23.45:132,0,23	1/1:9,1:16:5.75:82,6,0	0/0:23,0:18:0.36:0,0,0	0/1:13,0:14:42.04:60,0,42	0/0:10,0:10:3.01:0,3,37	0/0:17,0:15:9.03:0,9,133	0/1:17,0:16:2.70:3,0,15	0/0:22,0:21:1.55:0,2,4	0/0:19,0:19:9.48:0,9,84	0/0:21,0:20:6.01:0,6,56	1/1:15,4:20:6.02:140,6,0	0/1:21,0:21:27.45:27,0,112	1/1:19,0:19:13.36:79,13,0	0/0:10,0:9:6.01:0,6,56
chr10	94445305	.	CACACACACCA	C	2283.19	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=5.065;DP=566;FS=0.000;HRun=0;HaplotypeScore=142.2271;InbreedingCoeff=0.7402;MQ=57.97;MQ0=28;MQRankSum=-1.603;QD=11.30;ReadPosRankSum=0.408;VQSLOD=2.5710;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:30.08:0,30,840	0/0:9,0:9:22.01:0,22,700	0/0:33,0:16:48.14:0,48,741	0/0:33,0:14:39.06:0,39,549	0/0:21,0:21:39.13:0,39,1289	1/1:3,23:25:11.24:242,11,0	1/1:21,0:20:11.66:161,12,0	0/1:20,0:19:38.28:514,0,38	0/0:10,0:10:30.10:0,30,905	0/0:19,0:19:53.85:0,54,1579	0/0:15,0:14:30.09:0,30,737	1/1:5,12:16:12:263,12,0	1/1:2,8:10:11.86:397,12,0	1/1:1,14:15:2.39:103,2,0	0/0:16,0:16:31.05:0,31,1160	0/0:13,0:12:18.06:0,18,566	0/0:26,0:22:29.26:0,29,639	0/0:17,0:16:45.20:0,45,1002	0/0:21,0:21:49.41:0,49,989	0/0:16,0:14:36.12:0,36,1253	0/0:34,0:31:76.60:0,77,1558	1/1:3,22:24:4.73:91,5,0	1/1:3,22:25:11.78:372,12,0	1/1:3,19:21:9.01:300,9,0	0/0:15,0:14:27.09:0,27,924	0/0:19,0:19:52.42:0,52,1364	0/0:29,0:29:78.70:0,79,1878	0/1:13,0:12:31.61:32,0,109
chr10	94445311	.	CACCA	C	1398.13	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=6.186;DP=548;FS=1.320;HRun=0;HaplotypeScore=104.2595;InbreedingCoeff=0.8359;MQ=66.28;MQ0=22;MQRankSum=-0.875;QD=8.04;ReadPosRankSum=0.570;VQSLOD=2.7132;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:30.10:0,30,551	0/0:9,0:9:5.75:0,6,360	0/0:38,0:23:57.21:0,57,1027	0/0:35,0:17:48.09:0,48,713	0/0:20,0:20:39.12:0,39,628	1/1:27,0:24:6.02:87,6,0	0/0:18,0:17:0.47:0,0,1	1/1:23,0:22:54.17:720,54,0	0/0:10,0:10:30.08:0,30,550	0/0:17,0:17:48.56:0,49,873	0/0:14,0:13:19.21:0,19,389	1/1:18,0:16:6.29:117,6,0	1/1:9,0:9:11.76:173,12,0	1/1:17,0:15:2.75:43,3,0	0/0:18,0:18:36.54:0,37,670	0/0:13,0:12:18.06:0,18,329	0/0:24,0:20:49.97:0,50,661	0/0:16,0:15:45.05:0,45,661	0/0:21,0:21:48.63:0,49,793	0/0:14,0:12:33.11:0,33,679	0/0:30,0:27:67.17:0,67,1091	1/1:25,0:24:5.18:50,5,0	1/1:25,0:25:12.04:170,12,0	1/1:21,0:21:8.75:119,9,0	0/0:14,0:13:24.04:0,24,440	0/0:19,0:19:49.79:0,50,787	0/0:27,0:27:74.94:0,75,1210	1/1:1,8:9:6.02:106,6,0
chr10	94445313	.	CCA	C	1194.12	PASS	AB=0.567;AC=19;AF=0.339;AN=56;BaseQRankSum=6.251;DP=530;FS=3.018;HRun=0;HaplotypeScore=90.0032;InbreedingCoeff=0.8544;MQ=67.23;MQ0=13;MQRankSum=-0.691;QD=6.42;ReadPosRankSum=-0.023;VQSLOD=3.1413;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:30.10:0,30,450	0/0:9,0:9:18.06:0,18,293	0/0:38,0:23:57.21:0,57,1028	0/0:35,0:17:48.09:0,48,713	0/0:18,0:18:34.88:0,35,454	1/1:24,0:23:6.01:59,6,0	0/1:4,13:16:0:0,0,0	1/1:5,20:24:60.17:769,60,0	0/0:9,0:9:26.83:0,27,412	0/0:17,0:17:45.59:0,46,698	0/0:16,0:15:32.86:0,33,460	1/1:15,2:15:9.02:93,9,0	1/1:9,0:9:11.85:117,12,0	1/1:15,0:15:2.68:29,3,0	0/0:17,0:17:29.31:0,29,452	0/0:14,0:13:21.05:0,21,289	0/0:23,0:20:51.15:0,51,675	0/0:15,0:14:36.09:0,36,519	0/0:20,0:20:41.70:0,42,709	0/0:14,0:13:36.09:0,36,513	0/0:29,0:28:66.21:0,66,1022	1/1:24,0:24:3.51:41,4,0	1/1:25,0:25:11.81:124,12,0	1/1:21,0:21:9.60:88,10,0	0/0:13,0:12:24.08:0,24,383	0/0:16,0:16:37.34:0,37,525	0/0:25,0:25:66.81:0,67,977	1/1:9,0:9:6.01:60,6,0
chr10	94446401	.	G	GA	1748.23	PASS	AB=0.832;AC=27;AF=0.482;AN=56;BaseQRankSum=-0.272;DP=534;FS=7.525;HRun=15;HaplotypeScore=81.3876;InbreedingCoeff=0.1584;MQ=56.16;MQ0=17;MQRankSum=-2.680;QD=4.84;ReadPosRankSum=-4.211;VQSLOD=0.8241;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,2:35:25.20:0,25,243	0/1:7,3:10:9.02:42,0,9	0/0:10,0:5:2.42:0,2,36	0/0:6,0:5:7.78:0,8,32	0/1:10,6:18:25.95:102,0,26	0/0:20,0:20:18.98:0,19,113	0/0:17,0:15:27.69:0,28,166	0/0:19,0:20:1.25:0,1,87	0/1:6,8:14:2.92:86,0,3	1/1:11,2:13:10.95:102,11,0	1/1:6,9:19:17.76:147,18,0	0/1:18,1:22:21.35:21,0,65	0/1:14,0:15:11.63:12,0,46	0/0:16,0:16:14.80:0,15,89	1/1:7,4:12:4.05:123,4,0	1/1:7,7:14:16.07:118,16,0	1/1:17,5:22:10.56:269,11,0	0/1:14,7:21:15.41:186,0,15	1/1:11,6:16:22.81:164,23,0	0/1:18,11:30:15.44:86,0,15	1/1:5,7:13:14.67:104,15,0	0/1:25,0:26:21.09:21,0,71	0/1:23,4:28:17.35:17,0,79	0/0:26,0:27:19.70:0,20,116	1/1:17,4:21:0.84:144,1,0	0/1:14,0:14:2.27:2,0,15	0/1:18,5:23:5.01:180,0,5	0/0:16,0:14:13.65:0,14,101
chr10	94446967	.	GCACA	G	3455.69	PASS	AB=1.000;AC=19;AF=0.352;AN=54;BaseQRankSum=-3.850;DP=550;FS=1.033;HRun=0;HaplotypeScore=114.8885;InbreedingCoeff=0.8704;MQ=61.69;MQ0=12;MQRankSum=-0.860;QD=19.31;ReadPosRankSum=2.173;VQSLOD=3.5615;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:21:30.09:0,30,545	0/0:6,0:13:17.95:0,18,294	./.	0/0:32,0:17:3.01:0,3,40	0/0:15,0:16:17.92:0,18,175	1/1:12,6:21:25.12:495,25,0	1/1:7,5:12:18.05:259,18,0	0/1:28,0:28:59.56:60,0,68	0/0:9,0:22:26.79:0,27,483	0/0:11,0:20:24.06:0,24,350	0/0:16,0:22:47.88:0,48,695	1/1:11,9:20:36.08:528,36,0	1/1:4,9:13:21.07:333,21,0	1/1:7,7:14:27.09:428,27,0	0/0:10,0:18:17.56:0,18,307	0/0:7,0:26:45.15:0,45,783	0/0:15,0:24:49.76:0,50,683	0/0:16,0:24:59.05:0,59,679	0/0:13,0:12:9.01:0,9,126	0/0:14,0:15:29.84:0,30,654	0/0:24,0:24:38.45:0,38,679	1/1:8,9:19:18.05:267,18,0	1/1:10,8:18:14.95:238,15,0	1/1:11,12:23:47.51:667,48,0	0/0:15,0:22:36.10:0,36,578	0/0:14,0:14:33.05:0,33,598	0/0:15,1:17:35.56:0,36,582	1/1:7,3:11:14.63:181,15,0
chr10	94447079	.	GTA	G	12455.85	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=12.981;DP=554;FS=11.295;HRun=0;HaplotypeScore=94.1365;InbreedingCoeff=0.9242;MQ=65.53;MQ0=1;MQRankSum=-0.305;QD=29.38;ReadPosRankSum=3.654;VQSLOD=6.3042;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:39.13:506,39,0	1/1:1,6:7:12.04:156,12,0	0/0:4,0:4:2.74:0,3,67	0/0:9,0:6:3.72:0,4,24	1/1:1,30:31:81.26:1051,81,0	1/1:1,23:24:57.18:740,57,0	1/1:1,14:15:27.09:350,27,0	1/1:8,31:39:96.27:1202,96,0	1/1:2,13:15:24.08:312,24,0	1/1:2,27:29:81.21:1018,81,0	1/1:3,25:28:66.21:856,66,0	1/1:2,15:17:36.12:468,36,0	1/1:1,14:15:33.11:422,33,0	1/1:1,17:18:48.16:623,48,0	1/1:2,14:15:30.10:389,30,0	1/1:1,20:21:57.18:740,57,0	1/1:3,22:25:57.19:740,57,0	1/1:0,12:12:33.11:429,33,0	0/0:11,0:11:24.08:0,24,408	0/0:29,0:29:75.24:0,75,1248	0/0:20,0:20:57.11:0,57,852	1/1:1,19:20:42.14:545,42,0	1/1:1,26:27:57.66:741,58,0	1/1:2,13:15:33.11:428,33,0	1/1:1,18:19:45.15:584,45,0	0/0:30,1:31:45.24:0,45,1210	0/0:26,0:26:69.22:0,69,1144	1/1:3,8:11:12.04:156,12,0
chr10	94448760	.	T	TGCTGTCTTCCTTCTTTAGATC	2853.99	PASS	AB=0.721;AC=36;AF=0.947;AN=38;BaseQRankSum=-3.019;DP=49;FS=13.255;HRun=0;HaplotypeScore=29.0528;InbreedingCoeff=-0.2241;MQ=141.41;MQ0=0;MQRankSum=-2.424;QD=66.37;ReadPosRankSum=-0.915;VQSLOD=0.9547;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:1:2.99:23,3,0	1/1:0,0:1:3.01:122,3,0	0/1:5,1:9:94.69:1004,0,95	0/1:4,0:6:33.05:710,0,33	./.	1/1:1,0:1:3:25,3,0	./.	1/1:3,0:3:6.01:77,6,0	1/1:2,0:2:3.01:49,3,0	./.	1/1:1,0:1:2.97:20,3,0	1/1:1,0:1:2.97:20,3,0	./.	1/1:2,0:2:3.01:39,3,0	1/1:1,0:1:3.01:50,3,0	./.	1/1:1,0:1:2.98:22,3,0	./.	1/1:1,0:1:3.01:44,3,0	1/1:2,0:2:6.01:103,6,0	1/1:1,0:1:3:25,3,0	1/1:2,0:2:3.01:50,3,0	1/1:1,0:2:3.01:119,3,0	1/1:1,0:1:3.01:49,3,0	./.	1/1:3,0:5:12.04:395,12,0	./.	./.
chr10	94452742	.	GAAGGGCTGTGTTCATCAGTCCCA	G	18777.16	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=13.093;DP=470;FS=108.001;HRun=0;HaplotypeScore=254.8189;InbreedingCoeff=0.8596;MQ=83.63;MQ0=0;MQRankSum=-12.705;QD=81.64;ReadPosRankSum=5.076;VQSLOD=1.7077;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,157,14289	1/1:0,5:5:6.02:380,6,0	0/0:21,0:21:63.22:0,63,3402	0/0:23,0:23:63.19:0,63,3903	1/1:1,15:16:18.06:992,18,0	1/1:1,11:12:6.02:379,6,0	1/1:3,13:16:21.07:1328,21,0	1/1:0,11:11:30.10:893,30,0	1/1:0,12:12:27.09:1673,27,0	1/1:1,15:16:39.12:1942,39,0	1/1:0,10:10:21.07:1238,21,0	1/1:0,10:10:18.06:1138,18,0	1/1:2,13:15:30.10:1861,30,0	1/1:1,13:14:30.10:1896,30,0	1/1:1,7:8:15.05:875,15,0	1/1:1,6:7:18.06:1138,18,0	1/1:3,16:19:3.01:190,3,0	1/1:13,0:13:18.06:368,18,0	0/0:25,0:25:72.25:0,72,4798	0/0:24,0:24:72.25:0,72,6467	0/0:42,0:42:99:0,126,12246	1/1:0,8:8:9.03:569,9,0	1/1:2,9:11:12.04:594,12,0	1/1:1,11:12:9:565,9,0	1/1:1,9:10:9.03:569,9,0	0/0:28,0:28:8.88:0,9,7802	0/0:24,0:24:69.24:0,69,6788	1/1:1,4:5:3.01:190,3,0
chr10	94452745	.	G	GC	643.09	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=3.074;DP=451;FS=10.764;HRun=0;HaplotypeScore=137.3492;InbreedingCoeff=0.1879;MQ=85.97;MQ0=0;MQRankSum=-2.334;QD=6.91;ReadPosRankSum=-2.419;VQSLOD=2.6348;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,157,2179	0/0:5,0:5:4.07:0,4,12	0/0:22,0:22:65.86:0,66,853	0/0:26,0:25:63.18:0,63,835	0/0:15,0:15:8.15:0,8,23	0/0:11,0:11:4.07:0,4,12	0/0:13,0:13:0.59:0,1,21	1/1:11,0:11:16.20:315,16,0	0/1:12,0:12:25.52:26,0,28	0/1:15,0:15:26.28:101,0,26	0/1:10,0:10:20.21:30,0,20	0/0:10,0:10:12.22:0,12,36	0/1:13,0:13:23.48:23,0,32	0/1:13,0:13:15.73:16,0,32	0/0:7,0:7:8.15:0,8,24	0/0:6,0:6:12.22:0,12,36	0/0:16,0:16:2.04:0,2,6	1/1:0,10:10:18.01:243,18,0	0/0:25,0:25:72.23:0,72,991	0/0:24,0:24:72.20:0,72,980	0/0:43,0:43:99:0,126,1746	0/0:8,0:8:6.11:0,6,18	0/1:9,0:9:4.72:38,0,5	0/0:11,0:11:4.55:0,5,13	0/0:9,0:9:6.11:0,6,18	0/0:27,0:27:35.87:0,36,1045	0/0:23,0:23:69.23:0,69,963	0/0:4,0:4:2.04:0,2,6
chr10	94455798	.	AGC	A	902.49	PASS	AC=32;AF=0.696;AN=46;BaseQRankSum=6.595;DP=201;FS=2.374;HRun=0;HaplotypeScore=59.4180;InbreedingCoeff=0.6489;MQ=86.76;MQ0=2;MQRankSum=-7.839;QD=8.94;ReadPosRankSum=1.619;VQSLOD=3.1664;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:5:2.50:9,2,0	./.	0/0:10,0:7:15.50:0,15,234	0/0:26,0:17:17.75:0,18,326	./.	1/1:5,7:12:15.29:93,15,0	./.	1/1:13,5:17:42.22:408,42,0	1/1:0,4:7:8.28:57,8,0	1/1:0,5:6:18.02:220,18,0	1/1:0,4:5:2.50:9,2,0	1/1:3,4:8:4.97:18,5,0	1/1:1,2:3:2.50:9,2,0	1/1:1,4:5:5.38:57,5,0	1/1:0,5:6:2.60:10,3,0	1/1:0,0:1:2.50:9,2,0	1/1:7,2:11:3.96:39,4,0	1/1:0,2:4:8.64:47,9,0	0/0:16,0:16:48.16:0,48,969	0/0:3,0:3:9.03:0,9,181	0/0:5,0:5:12.04:0,12,244	./.	1/1:2,3:5:4.19:13,4,0	1/1:3,0:3:3.01:42,3,0	./.	0/0:8,0:8:24.08:0,24,486	0/0:22,0:22:66.23:0,66,1295	1/1:2,0:2:2.99:23,3,0
chr10	94455802	.	A	AT	235.30	PASS	AB=0.884;AC=21;AF=0.404;AN=52;BaseQRankSum=7.617;DP=243;FS=3.729;HRun=1;HaplotypeScore=84.0772;InbreedingCoeff=0.2964;MQ=79.69;MQ0=2;MQRankSum=-6.294;QD=2.20;ReadPosRankSum=3.314;VQSLOD=-0.6041;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:14.07:39,0,14	./.	0/0:9,0:6:11.12:0,11,103	0/0:28,0:18:22.35:0,22,210	0/0:5,0:5:5.68:0,6,29	0/1:13,5:17:4.60:50,0,5	0/0:3,0:3:0.89:0,1,2	0/0:28,0:24:34.83:0,35,258	1/1:5,0:5:8.89:59,9,0	0/1:8,0:8:29.41:29,0,33	1/1:6,0:6:5.84:34,6,0	1/1:6,2:8:5.83:33,6,0	0/1:3,1:4:7.69:10,0,8	0/1:5,1:6:7.57:9,0,8	1/1:6,0:6:2.94:18,3,0	1/1:1,0:1:2.97:20,3,0	0/1:15,0:15:2.24:2,0,83	1/1:6,0:6:5.96:43,6,0	0/0:15,0:15:45.14:0,45,603	0/0:2,0:2:6.02:0,6,84	0/0:5,0:5:12.04:0,12,168	0/0:5,0:5:2.60:0,3,10	0/1:4,2:6:9.80:10,0,16	./.	1/1:6,0:6:5.88:36,6,0	0/0:10,0:10:30.09:0,30,388	0/0:22,0:22:66.21:0,66,904	0/0:2,0:2:1.25:0,1,3
chr10	94455803	.	A	ATATATGT	2395.19	PASS	AB=1.000;AC=36;AF=0.692;AN=52;BaseQRankSum=7.099;DP=247;FS=4.273;HRun=0;HaplotypeScore=95.2030;InbreedingCoeff=0.4899;MQ=79.16;MQ0=2;MQRankSum=-5.392;QD=15.65;ReadPosRankSum=1.286;VQSLOD=2.5566;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:12.04:212,12,0	./.	0/0:9,0:6:13.08:0,13,124	0/0:31,0:19:10.67:0,11,215	1/1:6,0:6:1.55:5,2,0	1/1:13,5:17:4.47:514,4,0	1/1:3,0:3:3.01:46,3,0	0/1:28,0:24:99:174,0,293	1/1:6,0:6:9.03:184,9,0	0/1:8,0:8:7.90:143,0,8	1/1:6,0:6:6.02:119,6,0	1/1:7,2:9:6.02:160,6,0	1/1:3,1:4:3.48:81,3,0	1/1:5,1:6:3.48:79,3,0	1/1:6,0:6:3.01:60,3,0	1/1:1,0:1:3.01:60,3,0	1/1:15,0:15:14.02:185,14,0	1/1:6,0:6:9.03:182,9,0	0/0:11,0:14:42.14:0,42,1048	0/0:2,0:2:6.02:0,6,148	0/0:5,0:5:12.04:0,12,268	1/1:5,0:5:3.01:53,3,0	1/1:4,2:6:6.02:127,6,0	./.	1/1:6,0:6:6.02:119,6,0	0/0:10,0:10:30.09:0,30,600	0/0:21,0:21:63.21:0,63,1508	1/1:2,0:2:3.01:62,3,0
chr10	94455812	.	A	ATG	1861.39	PASS	AB=0.947;AC=34;AF=0.680;AN=50;BaseQRankSum=0.264;DP=271;FS=18.960;HRun=0;HaplotypeScore=76.6648;InbreedingCoeff=0.5604;MQ=82.15;MQ0=2;MQRankSum=-2.941;QD=10.76;ReadPosRankSum=-1.200;VQSLOD=1.6846;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,2:11:11.93:112,12,0	./.	0/0:11,0:8:5.54:0,6,86	0/0:35,0:22:25.92:0,26,166	1/1:8,1:9:17.19:128,17,0	1/1:12,5:16:17.62:178,18,0	1/1:3,0:3:3:25,3,0	0/1:34,0:30:99:405,0,119	1/1:3,3:6:15.02:167,15,0	1/1:7,1:8:3.02:183,3,0	1/1:5,1:6:9:90,9,0	1/1:9,2:11:12.01:126,12,0	1/1:5,1:6:6:62,6,0	1/1:4,1:5:5.93:54,6,0	1/1:5,1:6:6.01:67,6,0	1/1:0,1:1:3.01:41,3,0	0/1:15,0:17:25.68:68,0,26	1/1:8,2:10:14.99:160,15,0	0/0:16,0:16:45.02:0,45,538	0/0:3,0:3:6.01:0,6,71	0/0:4,0:4:9:0,9,113	1/1:7,0:7:5.99:48,6,0	1/1:6,2:8:11.68:97,12,0	./.	1/1:8,0:8:3:25,3,0	0/0:8,0:8:24.06:0,24,328	0/0:17,0:17:51.10:0,51,690	./.
chr10	94455960	.	CT	C	11193.87	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=11.934;DP=438;FS=3.421;HRun=2;HaplotypeScore=70.5246;InbreedingCoeff=0.9973;MQ=94.78;MQ0=0;MQRankSum=-4.948;QD=36.34;ReadPosRankSum=1.849;VQSLOD=5.6188;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:66.21:857,66,0	1/1:0,7:7:21.07:273,21,0	0/0:18,0:18:48.13:0,48,668	0/0:23,0:23:57.16:0,57,818	1/1:0,22:22:63.20:818,63,0	1/1:0,13:13:33.11:428,33,0	1/1:1,16:17:42.14:545,42,0	1/1:1,31:32:93.25:1149,93,0	1/1:0,11:11:33.11:428,33,0	1/1:0,16:16:48.16:622,48,0	1/1:1,18:19:48.16:623,48,0	1/1:0,8:8:24.08:311,24,0	1/1:0,10:10:30.10:389,30,0	1/1:1,12:13:36.12:467,36,0	1/1:0,13:13:36.12:467,36,0	1/1:0,15:15:45.15:584,45,0	1/1:0,11:11:27.09:350,27,0	1/1:1,7:8:21.07:273,21,0	0/0:13,0:13:39.13:0,39,580	0/0:19,0:19:57.19:0,57,854	0/0:17,0:17:51.17:0,51,763	1/1:0,11:11:33.11:428,33,0	1/1:0,21:21:60.20:779,60,0	1/1:0,8:8:24.08:311,24,0	1/1:0,14:14:42.14:545,42,0	0/0:19,0:19:57.19:0,57,850	0/0:21,0:21:63.20:0,63,918	1/1:0,15:15:42.14:545,42,0
chr10	94456037	.	G	GT	5659.35	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=4.272;DP=492;FS=7.731;HRun=1;HaplotypeScore=147.0461;InbreedingCoeff=0.9899;MQ=89.45;MQ0=0;MQRankSum=-5.232;QD=38.76;ReadPosRankSum=3.448;VQSLOD=3.6903;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:87.28:0,87,1129	0/0:4,0:4:12.04:0,12,156	0/0:19,0:19:52.08:0,52,612	0/0:22,0:22:57.09:0,57,671	0/0:15,0:15:36.12:0,36,467	1/1:0,30:30:87.29:1303,87,0	1/1:1,10:11:30.10:449,30,0	0/0:24,0:24:69.20:0,69,857	0/0:15,0:15:45.15:0,45,584	0/0:16,0:16:48.16:0,48,623	0/0:14,0:14:30.10:0,30,389	1/1:1,17:18:48.16:719,48,0	1/1:1,17:18:54.14:784,54,0	1/1:4,22:26:72.19:1036,72,0	0/0:29,0:29:84.27:0,84,1091	0/0:14,0:14:42.14:0,42,545	0/0:13,0:13:36.09:0,36,450	0/0:15,0:15:39.13:0,39,506	0/0:11,0:11:33.11:0,33,428	0/0:13,0:13:39.10:0,39,478	0/0:29,0:29:84.26:0,84,1074	1/1:1,6:7:15.05:224,15,0	1/1:1,9:11:21.03:290,21,0	1/1:1,24:25:57.66:855,58,0	0/0:7,0:7:21.07:0,21,272	0/0:21,0:21:63.20:0,63,818	0/0:22,0:22:66.20:0,66,842	0/0:7,0:7:21.07:0,21,272
chr10	94456946	.	T	TTGTC	27635.60	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=12.522;DP=658;FS=4.124;HRun=0;HaplotypeScore=177.9682;InbreedingCoeff=0.9983;MQ=73.53;MQ0=0;MQRankSum=-12.306;QD=59.69;ReadPosRankSum=1.095;VQSLOD=6.1510;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:21:51.17:1337,51,0	1/1:6,9:15:30.10:764,30,0	0/0:24,0:24:60.20:0,60,1089	0/0:17,0:17:45.15:0,45,818	1/1:10,39:50:99:2689,102,0	1/1:0,17:17:42.14:1118,42,0	1/1:4,14:18:42.14:1098,42,0	1/1:6,13:20:48.12:1114,48,0	1/1:4,18:23:57.20:1511,57,0	1/1:4,27:34:87.27:2169,87,0	1/1:3,23:27:75.26:1961,75,0	1/1:3,12:17:33.11:878,33,0	1/1:2,14:17:39.13:951,39,0	1/1:5,12:18:33.11:859,33,0	1/1:4,22:26:60.21:1577,60,0	1/1:2,17:20:48.16:1270,48,0	1/1:8,5:13:21.07:524,21,0	1/1:3,10:13:33.11:868,33,0	0/0:21,0:21:57.19:0,57,1002	0/0:32,0:32:84.29:0,84,1548	0/0:43,0:43:99:0,120,2193	1/1:6,27:34:87.30:2262,87,0	1/1:4,23:28:60.16:1593,60,0	1/1:4,8:14:21.67:559,22,0	1/1:4,19:23:60.21:1578,60,0	0/0:28,0:28:75.26:0,75,1400	0/0:30,0:29:84.27:0,84,1509	1/1:0,14:13:36.12:956,36,0
chr10	94457051	.	AGTGTGTGTGTATGT	A	2436.31	PASS	AB=0.854;AC=29;AF=0.604;AN=48;BaseQRankSum=6.353;DP=637;FS=23.014;HRun=0;HaplotypeScore=258.2614;InbreedingCoeff=0.6016;MQ=53.01;MQ0=9;MQRankSum=0.498;QD=8.37;ReadPosRankSum=0.469;VQSLOD=0.6903;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:23:13.07:97,13,0	1/1:6,0:6:6:63,6,0	0/0:59,0:26:18.81:0,19,332	0/0:71,0:34:6.39:0,6,592	./.	1/1:13,0:17:14.83:113,15,0	1/1:30,0:30:44.05:403,44,0	0/1:17,0:16:17.95:155,0,18	1/1:20,4:24:27.66:475,28,0	1/1:26,1:27:46.92:640,47,0	./.	1/1:4,0:19:1.55:4,2,0	0/0:4,0:8:2.74:0,3,12	./.	1/1:1,14:15:0.89:2,1,0	1/1:5,15:21:3.01:122,3,0	1/1:16,0:17:19.42:212,19,0	0/1:19,0:19:51.55:165,0,52	0/0:15,0:15:35.44:0,35,531	0/0:12,0:12:24.02:0,24,414	0/0:58,0:57:99:0,107,2337	1/1:10,0:11:3.76:27,4,0	0/1:4,0:18:0:0,0,0	1/1:22,0:23:8.09:61,8,0	./.	0/0:22,0:22:18.58:0,19,1166	0/0:27,0:27:32.29:0,32,977	1/1:3,0:3:8.95:68,9,0
chr10	94457062	.	A	ATGTGTG	1463.79	PASS	AB=1.000;AC=24;AF=0.545;AN=44;BaseQRankSum=-4.425;DP=606;FS=0.000;HRun=0;HaplotypeScore=203.8176;InbreedingCoeff=0.3618;MQ=50.46;MQ0=12;MQRankSum=1.372;QD=4.53;ReadPosRankSum=0.463;VQSLOD=2.1409;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:0.47:2,0,0	0/1:6,0:6:0:0,0,0	./.	0/0:66,0:27:1.25:0,1,3	./.	0/0:20,0:20:2.51:0,3,32	0/0:29,0:29:0.40:0,0,14	1/1:10,0:9:1.25:3,1,0	0/1:24,0:25:4.63:84,0,5	0/1:20,0:20:4.61:135,0,5	./.	1/1:17,0:17:2.99:24,3,0	./.	0/1:22,0:21:0:0,0,0	0/1:15,0:15:0:0,0,0	0/0:16,0:16:2.99:0,3,23	0/0:19,0:19:8.32:0,8,92	0/0:19,0:17:1.82:0,2,5	1/1:13,0:18:11.81:138,12,0	1/1:7,0:18:3.01:78,3,0	1/1:56,0:55:23.79:224,24,0	0/0:10,0:9:0.22:0,0,1	0/1:15,0:16:0:0,0,0	1/1:25,0:25:0.26:1,0,0	./.	1/1:11,10:22:24.08:297,24,0	1/1:9,1:29:24.98:588,25,0	./.
chr10	94457069	.	T	TCA	434.61	PASS	AB=0.909;AC=14;AF=0.259;AN=54;BaseQRankSum=4.789;DP=597;FS=11.857;HRun=0;HaplotypeScore=184.3141;InbreedingCoeff=-0.1888;MQ=46.62;MQ0=13;MQRankSum=-2.106;QD=1.62;ReadPosRankSum=-2.275;VQSLOD=1.2368;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,4:22:5.99:0,6,91	0/0:6,0:6:5.78:0,6,82	0/0:37,0:8:8.21:0,8,174	0/1:57,0:18:1.31:1,0,463	0/0:20,0:20:3.01:0,3,33	0/1:18,5:23:99:187,0,105	0/1:15,11:26:72.81:73,0,217	0/1:8,0:7:22.91:23,0,132	0/0:25,0:25:11.53:0,12,162	0/1:22,0:22:12.58:13,0,702	./.	0/1:17,1:18:21.34:32,0,21	1/1:7,0:6:3.01:36,3,0	0/0:19,3:21:0:0,0,0	0/0:20,0:20:2.73:0,3,20	0/0:20,0:20:5.91:0,6,62	0/1:14,4:18:99:106,0,109	0/1:23,1:22:20.63:21,0,354	0/0:17,0:17:50.88:0,51,586	0/1:17,0:17:10.08:10,0,181	0/0:50,0:49:91.97:0,92,1301	0/1:8,2:9:40.33:43,0,40	0/1:16,0:16:0:0,0,0	0/1:18,5:23:26.26:26,0,40	0/0:18,0:18:3.01:0,3,33	0/0:21,0:21:56.82:0,57,757	0/0:30,0:29:42.76:0,43,389	0/0:3,0:3:6.02:0,6,83
chr10	94457577	.	TAA	T	1440.67	PASS	AB=0.631;AC=24;AF=0.429;AN=56;BaseQRankSum=5.854;DP=330;FS=0.000;HRun=16;HaplotypeScore=49.6940;InbreedingCoeff=0.6493;MQ=55.84;MQ0=17;MQRankSum=-2.491;QD=9.00;ReadPosRankSum=4.006;VQSLOD=0.5135;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,14:18:32.87:276,33,0	1/1:0,2:2:3:25,3,0	0/0:13,0:4:5.96:0,6,48	0/0:9,0:5:2.71:0,3,40	1/1:4,10:15:17.70:149,18,0	0/1:8,1:13:14.94:15,0,20	0/0:3,3:8:4.74:0,5,17	0/0:21,0:14:18.02:0,18,203	1/1:2,6:8:6.83:93,7,0	1/1:5,8:11:14.83:124,15,0	1/1:0,5:5:8.99:75,9,0	0/1:2,2:6:0.44:29,0,0	0/0:6,0:8:7.75:0,8,56	0/0:2,0:2:2.96:0,3,19	1/1:4,7:9:11.90:100,12,0	1/1:0,7:7:11.99:100,12,0	1/1:8,14:27:49.83:373,50,0	1/1:6,9:14:10.98:135,11,0	0/0:14,0:14:18.59:0,19,155	0/0:10,0:12:26.43:0,26,300	0/0:3,0:3:9.01:0,9,95	0/0:2,0:2:3.01:0,3,39	0/0:2,0:2:2.37:0,2,8	0/0:3,0:6:2.37:0,2,8	1/1:9,6:14:9.16:138,9,0	0/0:23,0:28:71.88:0,72,800	0/0:24,0:24:54.08:0,54,637	0/0:7,0:6:18.03:0,18,206
chr10	94457685	.	A	AAAAAT	6512.70	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=5.848;DP=318;FS=0.000;HRun=0;HaplotypeScore=62.5903;InbreedingCoeff=0.6961;MQ=59.36;MQ0=7;MQRankSum=-7.313;QD=31.77;ReadPosRankSum=1.036;VQSLOD=4.5169;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:9.03:221,9,0	1/1:4,0:4:6.02:132,6,0	0/1:13,0:5:8.79:9,0,48	0/0:24,0:12:11.52:0,12,285	1/1:17,0:17:20.96:371,21,0	1/1:4,18:22:45.15:1249,45,0	1/1:3,1:5:3.01:85,3,0	1/1:23,0:20:33.06:667,33,0	1/1:6,0:4:6.01:147,6,0	1/1:5,0:5:12.04:271,12,0	1/1:11,0:10:12:242,12,0	1/1:0,2:4:5.90:170,6,0	1/1:5,4:8:9.03:255,9,0	1/1:0,5:5:12.04:329,12,0	1/1:5,0:5:9.03:213,9,0	1/1:4,0:4:3.01:74,3,0	1/1:18,0:18:30.02:584,30,0	1/1:14,0:11:11.84:272,12,0	0/0:22,0:20:33.08:0,33,492	0/0:12,0:12:30.09:0,30,519	0/0:13,0:13:30.08:0,30,485	1/1:1,2:3:6.02:151,6,0	1/1:3,4:7:15.05:413,15,0	1/1:2,3:6:6.02:161,6,0	1/1:13,0:12:12.04:290,12,0	0/0:14,0:14:30.09:0,30,494	0/0:28,0:28:33.08:0,33,537	1/1:3,0:3:9.03:207,9,0
chr10	94457705	.	T	TAAAAA	8273.59	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-0.029;DP=350;FS=1.598;HRun=4;HaplotypeScore=60.5537;InbreedingCoeff=0.4974;MQ=67.48;MQ0=1;MQRankSum=-5.874;QD=35.51;ReadPosRankSum=2.001;VQSLOD=1.2293;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:10:9.03:264,9,0	1/1:0,3:4:8.99:208,9,0	0/1:12,0:8:9.28:9,0,96	0/0:31,0:20:18.08:0,18,460	1/1:3,16:20:41.89:713,42,0	1/1:20,0:19:42.14:909,42,0	0/1:9,0:9:57.90:110,0,58	1/1:7,26:32:87.17:1493,87,0	1/1:0,8:9:6.02:187,6,0	1/1:0,9:9:23.99:462,24,0	1/1:1,9:10:17.92:339,18,0	1/1:4,0:4:6.02:127,6,0	1/1:7,0:7:9.03:202,9,0	0/1:8,0:8:42.87:236,0,43	1/1:1,5:6:9.03:281,9,0	1/1:1,3:4:6.02:187,6,0	1/1:9,9:18:48.05:963,48,0	1/1:1,13:17:11.86:374,12,0	0/0:20,0:20:43.52:0,44,723	0/0:17,0:17:51.02:0,51,719	0/0:14,0:14:33.09:0,33,593	0/1:6,0:6:81.81:107,0,82	1/1:6,0:6:15.05:334,15,0	0/1:6,0:6:14.92:109,0,15	1/1:0,6:6:12.04:375,12,0	0/0:17,0:17:36.04:0,36,664	0/0:18,0:18:45.05:0,45,668	1/1:0,5:5:9.03:281,9,0
chr10	94457873	.	AG	A	2028.19	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=3.720;DP=320;FS=0.000;HRun=4;HaplotypeScore=63.9201;InbreedingCoeff=0.8573;MQ=83.17;MQ0=0;MQRankSum=-0.829;QD=13.09;ReadPosRankSum=-1.291;VQSLOD=1.5221;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:25:60.18:717,60,0	0/0:5,0:5:12.48:0,12,46	0/0:14,0:12:20.93:0,21,313	0/0:9,0:8:18.02:0,18,229	0/1:8,0:8:2.50:2,0,37	1/1:12,0:12:29.26:137,29,0	1/1:12,0:12:33.23:177,33,0	1/1:23,0:23:48.53:233,49,0	0/0:11,0:11:25.10:0,25,94	0/1:12,0:12:5.98:6,0,54	0/0:6,0:7:14.70:0,15,53	1/1:9,0:9:22.13:99,22,0	1/1:8,0:8:18.09:75,18,0	1/1:10,0:10:28.12:133,28,0	0/0:12,0:12:27.27:0,27,106	0/0:6,0:6:14.35:0,14,50	1/1:0,15:15:39.12:467,39,0	0/0:11,0:12:18.96:0,19,76	0/0:16,0:16:42.12:0,42,542	0/0:14,0:14:42.14:0,42,587	0/0:8,0:8:21.07:0,21,294	1/1:9,0:9:18.11:72,18,0	1/1:5,0:5:10.91:41,11,0	1/1:3,0:3:8.68:54,9,0	0/0:13,0:13:26.55:0,27,95	0/0:18,0:18:54.17:0,54,740	0/0:20,0:20:60.18:0,60,819	1/1:4,0:3:8.13:35,8,0
chr10	94457875	.	G	GA	911.11	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-0.439;DP=322;FS=3.413;HRun=0;HaplotypeScore=69.5685;InbreedingCoeff=0.9111;MQ=83.19;MQ0=0;MQRankSum=-1.611;QD=13.60;ReadPosRankSum=-2.282;VQSLOD=4.1046;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:52.94:225,53,0	0/0:5,0:5:14.20:0,14,69	0/0:14,0:12:32.55:0,33,412	0/0:9,0:8:18.06:0,18,246	0/0:8,0:8:15.23:0,15,80	0/0:13,0:13:29.03:0,29,177	0/0:12,0:12:33.84:0,34,199	1/1:7,15:22:55.53:569,56,0	0/0:11,0:11:9.99:0,10,109	0/0:12,0:12:25.81:0,26,109	0/0:7,0:7:16.54:0,17,76	0/0:9,0:9:23.50:0,24,142	0/0:8,0:8:20.55:0,21,134	0/0:11,0:11:29.43:0,29,182	0/0:12,0:12:30.86:0,31,151	0/0:7,0:7:17.21:0,17,78	1/1:15,0:15:36.26:167,36,0	0/0:11,0:11:21.64:0,22,105	0/0:16,0:16:45.14:0,45,610	0/0:14,0:14:42.14:0,42,587	0/0:8,0:8:21.07:0,21,294	0/0:9,0:9:21.78:0,22,135	0/0:5,0:5:7.52:0,8,38	0/0:3,0:3:8.71:0,9,49	0/0:13,0:13:30.68:0,31,142	0/0:18,0:18:54.18:0,54,753	0/0:20,0:20:60.20:0,60,837	1/1:0,4:3:9.03:105,9,0
chr10	94457876	.	G	GA	2438.70	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-1.803;DP=322;FS=1.022;HRun=0;HaplotypeScore=64.6343;InbreedingCoeff=0.9067;MQ=80.99;MQ0=0;MQRankSum=-2.835;QD=23.01;ReadPosRankSum=0.810;VQSLOD=4.9397;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:49.32:0,49,162	0/0:5,0:5:12.98:0,13,52	0/0:13,0:11:32.31:0,32,402	0/0:8,0:7:18.06:0,18,247	0/0:8,0:8:15.45:0,15,66	1/1:1,13:14:29.80:353,30,0	1/1:2,10:12:28.11:347,28,0	1/1:23,0:23:42.73:518,43,0	0/0:11,0:11:25.55:0,26,99	0/0:12,0:12:25.47:0,25,95	0/0:7,0:7:15.06:0,15,56	1/1:0,9:9:24.07:275,24,0	1/1:1,8:9:21.06:242,21,0	1/1:0,10:11:29.82:326,30,0	0/0:11,0:11:28.14:0,28,115	0/1:7,0:7:2.55:3,0,38	0/0:15,0:15:30.83:0,31,100	0/0:11,0:11:20.71:0,21,81	0/0:16,0:16:48.12:0,48,631	0/0:14,0:14:42.14:0,42,587	0/0:8,0:8:21.07:0,21,294	1/1:1,8:9:22.96:270,23,0	1/1:0,5:5:10.87:137,11,0	1/1:1,2:3:5.71:72,6,0	0/0:13,0:13:27.58:0,28,106	0/0:18,0:18:54.18:0,54,750	0/0:20,0:20:60.20:0,60,834	1/1:4,0:3:9.03:108,9,0
chr10	94458196	.	T	TGAGCAACAGAGCCAGCAA	20690.91	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-1.886;DP=611;FS=0.860;HRun=0;HaplotypeScore=231.8022;InbreedingCoeff=0.9653;MQ=67.58;MQ0=0;MQRankSum=-14.473;QD=85.50;ReadPosRankSum=-0.649;VQSLOD=4.4839;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,110,5163	0/0:8,0:8:21.07:0,21,780	0/0:20,0:20:54.18:0,54,1906	0/0:18,0:18:42.11:0,42,1729	0/0:11,0:11:30.03:0,30,1036	1/1:2,7:30:25.29:1801,25,0	1/1:5,6:27:24.08:1962,24,0	1/1:38,0:37:99:5641,99,0	0/0:15,0:15:45.15:0,45,2035	0/0:9,0:9:24.08:0,24,1049	0/0:10,0:10:24.08:0,24,1146	1/1:5,10:33:30.10:2462,30,0	1/1:1,7:25:24.08:2058,24,0	1/1:4,13:27:42.11:3177,42,0	0/0:19,0:19:51.18:0,51,2269	0/0:20,0:20:51.13:0,51,2214	0/0:37,0:37:96.32:0,96,4232	0/0:26,0:26:71.46:0,71,2919	0/0:21,0:21:51.15:0,51,1999	0/0:19,0:19:51.18:0,51,2467	0/0:38,0:38:99:0,108,4441	1/1:3,1:14:5.98:278,6,0	1/1:4,5:15:21.07:1508,21,0	1/1:7,3:30:23.59:1285,24,0	0/0:14,0:14:42.02:0,42,1318	0/0:20,0:20:54.17:0,54,2179	0/0:18,0:18:42.11:0,42,1553	1/1:0,2:3:6.02:517,6,0
chr10	94458204	.	ACAGG	A	151.17	PASS	AB=0.698;AC=1;AF=0.018;AN=56;BaseQRankSum=3.002;DP=556;FS=0.000;HRun=0;HaplotypeScore=138.5728;InbreedingCoeff=-0.0263;MQ=73.94;MQ0=0;MQRankSum=-3.000;QD=4.09;ReadPosRankSum=-1.335;VQSLOD=2.2762;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,3644	0/0:7,0:7:20.96:0,21,529	0/0:24,0:24:68.45:0,68,1883	0/0:17,0:17:51.14:0,51,1360	0/0:12,0:12:33.05:0,33,853	0/0:18,0:18:34.92:0,35,725	0/0:20,0:20:32.47:0,32,718	0/1:21,16:37:99:226,0,1678	0/0:19,0:19:57.20:0,57,1585	0/0:11,0:11:33.11:0,33,947	0/0:12,0:12:30.10:0,30,869	0/0:22,0:22:35:0,35,605	0/0:15,0:15:24.22:0,24,399	0/0:22,0:22:42.14:0,42,786	0/0:19,0:19:57.20:0,57,1651	0/0:20,0:20:60.16:0,60,1545	0/0:34,0:34:99:0,102,2905	0/0:26,0:26:75.26:0,75,2084	0/0:20,0:20:60.17:0,60,1498	0/0:19,0:19:57.20:0,57,1580	0/0:40,0:40:99:0,120,3371	0/0:8,0:8:6.02:0,6,137	0/0:13,0:13:23.80:0,24,504	0/0:19,0:19:18.44:0,18,317	0/0:14,0:14:42.10:0,42,1019	0/0:20,0:20:57.18:0,57,1531	0/0:19,0:19:57.16:0,57,1510	0/0:3,0:3:6.02:0,6,111
chr10	94458842	.	ATATCACCG	A	25117.04	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=19.432;DP=678;FS=0.314;HRun=0;HaplotypeScore=237.2576;InbreedingCoeff=0.9972;MQ=53.36;MQ0=5;MQRankSum=-18.826;QD=59.80;ReadPosRankSum=2.353;VQSLOD=4.6245;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,5938	1/1:2,10:11:18.06:526,18,0	0/0:24,0:17:42.14:0,42,1863	0/0:30,0:20:54.18:0,54,2022	1/1:4,26:30:66.23:1873,66,0	1/1:1,33:34:84.29:2441,84,0	1/1:1,25:26:51.18:1475,51,0	1/1:5,27:31:74.97:1659,75,0	1/1:5,13:18:33.11:964,33,0	1/1:2,14:16:36.04:884,36,0	1/1:0,23:23:57.20:1611,57,0	1/1:0,20:20:51.18:1477,51,0	1/1:8,21:29:54.19:1576,54,0	1/1:3,19:22:42.14:1214,42,0	1/1:3,19:22:54.19:1577,54,0	1/1:0,13:13:30.10:877,30,0	0/0:27,0:27:81.28:0,81,3621	1/1:4,17:21:39.13:1061,39,0	0/0:19,0:19:57.19:0,57,2437	0/0:25,0:25:72.25:0,72,3198	0/0:37,0:37:99:0,111,4869	1/1:0,25:25:63.17:1710,63,0	1/1:3,17:20:45.15:1314,45,0	1/1:2,21:23:27.09:789,27,0	1/1:1,22:23:54.19:1578,54,0	0/0:25,0:25:69.23:0,69,2919	0/0:24,0:24:72.23:0,72,3084	1/1:1,10:11:18.06:510,18,0
chr10	94459077	.	A	AT	14844.63	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-0.511;DP=632;FS=1.807;HRun=4;HaplotypeScore=82.7611;InbreedingCoeff=0.9975;MQ=66.53;MQ0=0;MQRankSum=-1.309;QD=36.56;ReadPosRankSum=4.204;VQSLOD=4.8976;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1111	1/1:1,16:17:48.16:656,48,0	0/0:20,0:19:51.11:0,51,550	0/0:18,0:15:42.10:0,42,452	1/1:2,13:15:42.14:570,42,0	1/1:1,17:18:45.11:594,45,0	1/1:0,23:23:66.22:903,66,0	1/1:2,18:20:54.16:717,54,0	1/1:0,26:26:75.25:1026,75,0	1/1:2,20:22:63.21:861,63,0	1/1:0,14:15:36.12:492,36,0	1/1:1,18:19:45.15:616,45,0	1/1:2,31:33:87.25:1169,87,0	1/1:1,28:29:78.26:1067,78,0	1/1:0,21:21:60.20:821,60,0	1/1:1,24:25:69.23:944,69,0	0/0:30,0:30:84.22:0,84,943	1/1:0,19:19:54.18:739,54,0	0/0:21,0:21:57.16:0,57,646	0/0:17,0:17:48.12:0,48,533	0/0:44,0:43:99:0,117,1304	1/1:1,22:23:54.15:718,54,0	1/1:1,19:20:57.19:779,57,0	1/1:1,28:29:72.24:985,72,0	1/1:0,27:27:72.24:984,72,0	0/0:22,0:22:66.19:0,66,748	0/0:19,0:19:57.16:0,57,647	1/1:0,5:5:15.05:205,15,0
chr10	94459382	.	GA	G	12231.50	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=18.564;DP=736;FS=7.779;HRun=7;HaplotypeScore=167.0964;InbreedingCoeff=0.9996;MQ=80.37;MQ0=1;MQRankSum=-3.824;QD=26.36;ReadPosRankSum=0.628;VQSLOD=2.8250;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,138,1680	1/1:0,10:10:27.06:275,27,0	0/0:22,0:21:51.14:0,51,603	0/0:26,0:26:66.14:0,66,766	1/1:2,19:21:51.11:520,51,0	1/1:0,24:24:72.16:731,72,0	1/1:4,22:26:60.13:612,60,0	1/1:2,42:44:99:1255,126,0	1/1:3,27:30:75.17:765,75,0	1/1:2,21:23:60.12:605,60,0	1/1:1,17:17:42.10:428,42,0	1/1:4,25:29:69.08:691,69,0	1/1:1,23:24:66.15:672,66,0	1/1:4,28:32:81.18:825,81,0	1/1:2,25:27:75.17:765,75,0	1/1:1,31:32:84.13:844,84,0	0/0:34,0:34:96.27:0,96,1178	1/1:4,18:22:54.12:551,54,0	0/0:24,0:24:60.19:0,60,753	0/0:23,0:23:63.15:0,63,759	0/0:41,0:41:99:0,111,1396	1/1:0,26:26:75.17:765,75,0	1/1:2,16:18:38.83:397,39,0	1/1:2,34:36:87.19:887,87,0	1/1:0,12:12:36.08:367,36,0	0/0:28,1:29:47.58:0,48,884	0/0:23,0:23:63.20:0,63,790	1/1:0,10:10:27.06:275,27,0
chr10	94459542	.	AT	A	2019.85	PASS	AC=44;AF=0.957;AN=46;BaseQRankSum=2.327;DP=217;FS=0.000;HRun=3;HaplotypeScore=103.8620;InbreedingCoeff=0.0754;MQ=33.58;MQ0=0;MQRankSum=-1.341;QD=10.52;ReadPosRankSum=0.200;VQSLOD=1.3242;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:14.87:111,15,0	1/1:1,3:4:2.96:19,3,0	./.	./.	./.	1/1:3,7:10:11.97:108,12,0	1/1:1,5:6:3:29,3,0	./.	1/1:1,11:12:20.89:173,21,0	1/1:1,2:3:6.02:65,6,0	1/1:0,3:3:2.97:20,3,0	1/1:2,7:9:11.99:116,12,0	1/1:2,6:8:2.97:20,3,0	1/1:2,9:11:8.94:72,9,0	1/1:0,4:4:5.97:52,6,0	1/1:1,7:8:14.85:118,15,0	1/1:1,7:8:11.99:113,12,0	1/1:0,5:5:12.02:122,12,0	1/1:3,5:8:14.75:113,15,0	1/1:3,5:8:2.97:20,3,0	0/0:2,12:13:0.94:0,1,2	1/1:1,7:8:3.01:31,3,0	1/1:2,1:3:3.01:32,3,0	1/1:1,2:3:3:26,3,0	1/1:2,7:9:2.97:20,3,0	1/1:6,7:13:21.06:236,21,0	1/1:4,21:24:50.70:481,51,0	./.
chr10	94459694	.	T	TC	1742.66	PASS	AB=0.813;AC=37;AF=0.661;AN=56;BaseQRankSum=9.332;DP=526;FS=69.693;HRun=0;HaplotypeScore=111.5038;InbreedingCoeff=0.8226;MQ=72.89;MQ0=3;MQRankSum=-0.113;QD=6.92;ReadPosRankSum=1.968;VQSLOD=1.0757;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,138,1690	1/1:8,0:8:4.94:46,5,0	0/0:24,0:19:49.74:0,50,587	0/0:32,0:27:78.13:0,78,984	1/1:11,2:13:12.65:84,13,0	1/1:7,1:8:7.99:45,8,0	1/1:16,2:18:20.69:95,21,0	1/1:19,0:19:31.38:206,31,0	1/1:14,0:15:7.07:127,7,0	1/1:17,0:17:29.01:215,29,0	1/1:1,1:14:1.62:22,2,0	1/1:10,1:10:13.01:54,13,0	0/1:10,3:13:2.64:99,0,3	1/1:16,4:20:22.50:164,22,0	1/1:10,0:10:7.58:147,8,0	1/1:12,0:12:15.61:62,16,0	0/0:16,0:16:39.13:0,39,543	1/1:8,1:9:9.84:50,10,0	0/0:23,0:23:63.21:0,63,874	0/0:22,0:22:57.16:0,57,774	0/0:49,0:48:99:0,129,1635	1/1:12,2:13:23.62:150,24,0	1/1:5,3:8:9.36:46,9,0	1/1:15,3:17:6.17:35,6,0	1/1:12,1:12:20.78:113,21,0	0/0:28,0:28:69.19:0,69,920	0/0:31,0:30:90.18:0,90,1158	1/1:10,2:12:25.85:188,26,0
chr10	94460003	.	A	AC	2360.71	PASS	AB=0.938;AC=27;AF=0.482;AN=56;BaseQRankSum=9.276;DP=527;FS=18.064;HRun=7;HaplotypeScore=90.5686;InbreedingCoeff=0.5654;MQ=80.12;MQ0=1;MQRankSum=0.494;QD=8.87;ReadPosRankSum=0.387;VQSLOD=0.4933;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:72.10:0,72,689	0/0:11,0:11:1.27:0,1,5	0/0:10,1:10:11.57:0,12,153	0/0:25,0:25:19.63:0,20,295	0/0:20,0:20:1.73:0,2,15	1/1:4,5:9:3.09:153,3,0	1/1:5,18:23:0.95:323,1,0	1/1:22,0:21:5.87:63,6,0	0/1:18,0:18:1.59:2,0,2	1/1:16,0:16:2.84:20,3,0	1/1:14,0:14:4.03:38,4,0	1/1:5,8:13:21.13:355,21,0	1/1:3,18:22:34.27:458,34,0	1/1:3,15:18:20.23:375,20,0	1/1:27,0:27:2.80:40,3,0	0/1:17,0:17:0.09:3,0,0	0/0:33,0:33:90.12:0,90,863	0/1:19,0:19:0.04:3,0,0	0/0:10,0:10:18.02:0,18,173	0/0:20,0:20:42.06:0,42,404	0/0:47,0:47:99:0,125,1204	1/1:4,6:10:2.73:163,3,0	0/1:6,5:11:13.70:63,0,14	1/1:8,11:19:20.29:474,20,0	0/0:14,0:14:1.67:0,2,8	0/0:18,0:18:44.90:0,45,433	0/0:20,0:19:60:0,60,559	0/1:8,0:8:0.05:1,0,0
chr10	94460010	.	CA	C	6770.40	PASS	AB=0.977;AC=38;AF=0.679;AN=56;BaseQRankSum=11.420;DP=520;FS=27.093;HRun=1;HaplotypeScore=72.9996;InbreedingCoeff=0.8048;MQ=78.99;MQ0=1;MQRankSum=-3.020;QD=20.33;ReadPosRankSum=0.536;VQSLOD=3.4941;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.24:0,81,1131	1/1:0,9:9:21.07:280,21,0	0/0:13,0:12:2.41:0,2,241	0/1:19,1:21:8.71:9,0,477	1/1:0,19:19:29.92:389,30,0	1/1:9,0:9:15.13:127,15,0	1/1:22,0:22:11.04:106,11,0	1/1:0,26:25:72.12:833,72,0	1/1:0,19:19:48.16:665,48,0	1/1:0,15:15:36.09:467,36,0	1/1:0,16:16:30.10:412,30,0	1/1:14,0:14:31.76:207,32,0	1/1:22,0:22:33.37:187,33,0	1/1:18,0:18:13.63:152,14,0	1/1:0,23:23:54.18:747,54,0	1/1:0,18:18:36.12:502,36,0	0/0:33,0:33:99:0,99,1401	1/1:0,19:19:39.13:544,39,0	0/0:9,0:9:27.03:0,27,333	0/0:18,0:18:45.13:0,45,624	0/0:45,0:45:99:0,133,1879	1/1:10,0:10:10.70:73,11,0	0/1:7,0:7:7.96:21,0,8	1/1:21,1:21:43.58:334,44,0	1/1:1,13:14:29.60:386,30,0	0/0:20,0:20:15.29:0,15,671	0/0:22,0:21:66.13:0,66,882	1/1:0,10:10:24.08:333,24,0
chr10	94460145	.	T	TG	5006.75	PASS	AB=0.849;AC=49;AF=0.875;AN=56;BaseQRankSum=3.509;DP=438;FS=0.760;HRun=10;HaplotypeScore=76.1226;InbreedingCoeff=0.2703;MQ=75.13;MQ0=0;MQRankSum=0.678;QD=12.09;ReadPosRankSum=1.125;VQSLOD=4.6050;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:21:23.39:126,23,0	1/1:9,0:9:23.37:135,23,0	0/1:9,0:9:5.74:6,0,57	0/1:12,0:11:9.16:9,0,31	1/1:24,1:25:61.69:388,62,0	1/1:15,0:15:32.31:199,32,0	1/1:17,0:17:35.04:203,35,0	1/1:17,0:17:36.63:175,37,0	1/1:17,0:17:47.08:293,47,0	1/1:16,0:16:36.43:176,36,0	1/1:15,0:15:38.20:244,38,0	1/1:14,0:14:38.22:241,38,0	1/1:13,0:13:35.53:248,36,0	1/1:16,0:16:44.35:301,44,0	1/1:18,0:18:46.79:275,47,0	1/1:7,0:7:14.41:77,14,0	0/0:23,0:24:52.57:0,53,410	1/1:17,0:17:38.07:227,38,0	0/1:14,4:18:49.51:120,0,50	0/1:9,11:21:6.59:142,0,7	1/1:7,2:9:9.01:89,9,0	1/1:17,0:17:43.93:269,44,0	1/1:14,0:14:38.14:233,38,0	1/1:14,0:14:26.38:156,26,0	1/1:18,0:18:46.58:261,47,0	0/1:11,3:15:9.69:95,0,10	1/1:11,7:18:15.04:160,15,0	1/1:11,0:11:26.44:159,26,0
chr10	94460151	.	G	GA	10726.55	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=-8.912;DP=417;FS=1.537;HRun=0;HaplotypeScore=49.3665;InbreedingCoeff=0.7697;MQ=76.89;MQ0=0;MQRankSum=-1.082;QD=33.63;ReadPosRankSum=6.999;VQSLOD=4.1583;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:32.88:0,33,214	1/1:0,8:8:24.08:335,24,0	0/0:11,0:10:19.36:0,19,210	0/0:12,0:11:29.35:0,29,244	1/1:1,22:23:66.12:873,66,0	1/1:5,11:16:42.09:533,42,0	1/1:0,16:16:36.12:502,36,0	1/1:0,20:21:60.11:721,60,0	1/1:1,17:18:51.16:693,51,0	1/1:0,15:15:45.10:591,45,0	1/1:1,13:14:42.13:566,42,0	1/1:1,14:15:42.07:560,42,0	1/1:1,13:14:39.11:514,39,0	1/1:0,15:15:45.15:622,45,0	1/1:2,15:17:48.16:669,48,0	1/1:0,7:7:15.05:207,15,0	0/0:23,0:23:66.10:0,66,813	1/1:4,12:16:45.08:584,45,0	0/0:14,0:14:5.78:0,6,190	0/1:18,0:18:13.38:13,0,142	0/0:8,0:8:1.72:0,2,59	1/1:0,16:16:45.15:624,45,0	1/1:1,13:14:39.12:536,39,0	1/1:4,9:13:39.07:473,39,0	1/1:5,14:19:54.15:718,54,0	0/0:16,0:16:20.39:0,20,250	0/1:14,0:14:13.16:13,0,73	1/1:0,10:10:27.09:377,27,0
chr10	94460229	.	T	TAA	8775.68	PASS	AB=0.857;AC=43;AF=0.768;AN=56;BaseQRankSum=4.412;DP=438;FS=6.478;HRun=11;HaplotypeScore=76.2466;InbreedingCoeff=0.7020;MQ=66.88;MQ0=0;MQRankSum=-1.114;QD=24.44;ReadPosRankSum=-1.282;VQSLOD=4.2780;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:18:35.13:119,35,0	1/1:1,4:5:15.05:217,15,0	0/0:13,0:10:3.24:0,3,52	0/1:7,0:5:4.93:5,0,22	1/1:9,14:25:53.65:716,54,0	1/1:3,22:26:62.43:846,62,0	1/1:1,13:14:24.08:347,24,0	1/1:8,0:25:12.68:131,13,0	1/1:3,8:12:29.48:350,29,0	1/1:7,10:18:47.61:596,48,0	1/1:7,17:25:59.79:753,60,0	1/1:6,7:13:33.08:425,33,0	1/1:3,6:9:24.08:347,24,0	1/1:7,5:12:24.05:294,24,0	1/1:2,21:25:60.19:847,60,0	1/1:1,6:7:21.04:281,21,0	1/1:4,0:32:64.88:223,65,0	1/1:0,11:11:24.08:347,24,0	0/0:15,0:16:32.54:0,33,309	0/0:18,0:18:48.07:0,48,465	0/0:15,0:15:38.99:0,39,369	1/1:4,6:12:29.57:361,30,0	1/1:3,6:9:18.06:260,18,0	1/1:0,12:13:33.11:478,33,0	1/1:1,19:23:61.67:808,62,0	0/1:13,0:13:7.52:8,0,279	0/0:16,0:16:38.81:0,39,372	0/1:1,0:4:15.18:15,0,19
chr10	94460860	.	T	TAATA	11405.54	PASS	AB=0.614;AC=43;AF=0.768;AN=56;BaseQRankSum=-3.174;DP=476;FS=0.000;HRun=0;HaplotypeScore=84.8436;InbreedingCoeff=0.0726;MQ=56.73;MQ0=5;MQRankSum=-2.901;QD=25.80;ReadPosRankSum=0.436;VQSLOD=4.3473;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:23:67.96:84,0,68	1/1:5,4:9:3.91:393,4,0	0/0:17,0:9:20.13:0,20,209	0/0:16,0:10:14.34:0,14,134	1/1:0,23:24:41.79:682,42,0	1/1:3,19:22:21.07:535,21,0	1/1:0,5:7:6.02:169,6,0	1/1:41,0:41:99:1230,117,0	1/1:1,12:15:30.10:855,30,0	1/1:1,15:16:38.99:630,39,0	1/1:2,14:17:15.85:575,16,0	1/1:0,15:15:24.08:690,24,0	1/1:4,9:13:17.03:787,17,0	0/1:1,8:10:5.03:536,0,5	1/1:0,13:15:27.09:771,27,0	1/1:0,13:14:24.08:687,24,0	0/1:11,0:23:40.72:41,0,77	1/1:1,15:17:14.08:352,14,0	0/1:18,0:26:99:129,0,280	0/1:7,0:22:99:127,0,116	1/1:8,0:12:7.21:48,7,0	1/1:0,8:8:18.02:364,18,0	1/1:1,15:17:9.93:618,10,0	0/1:4,4:8:1.02:376,0,1	1/1:0,10:9:3.01:43,3,0	0/1:6,0:20:99:210,0,157	0/1:11,0:28:99:144,0,187	0/1:1,8:9:8.01:328,0,8
chr10	94461112	.	GA	G	2098.39	PASS	AB=0.853;AC=22;AF=0.393;AN=56;BaseQRankSum=3.090;DP=526;FS=26.961;HRun=12;HaplotypeScore=144.1274;InbreedingCoeff=-0.0768;MQ=50.18;MQ0=18;MQRankSum=-1.140;QD=6.01;ReadPosRankSum=4.450;VQSLOD=0.1840;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,54:61:99:1160,149,0	1/1:3,0:3:1.55:4,2,0	0/1:41,1:12:6.69:7,0,110	0/0:30,0:11:0.14:0,0,110	0/0:14,4:18:1.45:0,1,100	0/1:15,5:20:7.02:81,0,7	0/1:6,2:8:28.13:31,0,28	0/1:28,1:28:54.19:85,0,54	0/1:14,2:16:5.62:25,0,6	0/1:15,3:18:34.95:35,0,57	1/1:12,5:14:3.86:96,4,0	0/1:9,2:11:26.12:31,0,26	0/1:13,4:16:56.65:70,0,57	0/0:14,0:14:10.21:0,10,115	0/1:14,3:16:2.38:2,0,93	0/1:16,0:16:24.56:25,0,37	1/1:13,30:43:7.99:505,8,0	0/1:7,2:8:3.89:36,0,4	0/0:17,0:16:37.34:0,37,200	0/0:14,0:14:37.99:0,38,219	0/0:18,0:18:39.66:0,40,217	0/1:5,2:8:26.25:33,0,26	0/0:8,2:7:2.33:0,2,14	0/0:12,1:13:4.55:0,5,43	0/1:9,2:10:6.20:28,0,6	0/0:20,0:20:54.44:0,54,285	0/0:23,0:23:58.60:0,59,350	0/1:2,1:2:0.68:1,0,12
chr10	94461120	.	A	AAAAC	5825.85	PASS	AB=0.951;AC=35;AF=0.625;AN=56;BaseQRankSum=5.725;DP=510;FS=5.310;HRun=0;HaplotypeScore=164.5772;InbreedingCoeff=0.6871;MQ=50.92;MQ0=8;MQRankSum=-14.149;QD=21.98;ReadPosRankSum=-3.936;VQSLOD=3.7585;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,163,1688	1/1:4,0:4:8.87:107,9,0	0/0:30,0:11:4.88:0,5,203	0/0:19,0:10:23.51:0,24,254	0/1:17,2:19:12.62:294,0,13	1/1:13,9:22:25.47:788,25,0	1/1:9,0:9:6.85:112,7,0	1/1:11,17:28:40.70:693,41,0	1/1:10,6:19:4.71:349,5,0	1/1:12,4:16:15.10:440,15,0	1/1:13,3:13:24.12:345,24,0	1/1:8,2:10:9.71:124,10,0	1/1:15,2:16:28.63:321,29,0	1/1:12,4:16:15.81:396,16,0	0/1:17,1:18:0.53:253,0,1	1/1:12,5:17:29.98:549,30,0	0/0:39,0:40:65.59:0,66,904	1/1:9,0:8:2.47:103,2,0	0/0:18,0:17:45.04:0,45,628	0/0:15,0:15:44.89:0,45,636	0/0:16,0:16:43.57:0,44,643	0/1:8,0:8:12.82:66,0,13	1/1:7,2:7:6:98,6,0	1/1:11,2:13:19.37:256,19,0	1/1:5,5:9:25.21:437,25,0	0/0:24,0:24:69.19:0,69,1048	0/0:22,0:22:62.77:0,63,845	1/1:2,1:2:5.99:94,6,0
chr10	94461125	.	C	CAAAAA	8123.79	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=5.736;DP=502;FS=0.000;HRun=12;HaplotypeScore=162.6218;InbreedingCoeff=0.9677;MQ=52.46;MQ0=4;MQRankSum=-15.866;QD=30.54;ReadPosRankSum=-6.473;VQSLOD=0.2966;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,168,2720	1/1:3,1:4:9.03:149,9,0	0/0:26,0:11:18:0,18,254	0/0:17,0:10:22.06:0,22,308	1/1:21,0:21:46.77:536,47,0	1/1:20,1:21:45.50:833,46,0	1/1:10,0:10:23.70:209,24,0	1/1:27,1:27:60.31:1011,60,0	1/1:18,0:18:32.03:448,32,0	1/1:17,0:17:43.87:611,44,0	1/1:16,0:14:23.98:386,24,0	1/1:9,0:9:20.76:208,21,0	1/1:18,0:18:47.55:507,48,0	1/1:15,1:16:44.74:627,45,0	1/1:17,0:17:43.96:482,44,0	1/1:16,1:17:47.36:717,47,0	0/0:39,0:39:86.20:0,86,1321	1/1:10,0:9:23.80:209,24,0	0/0:19,0:18:48.10:0,48,690	0/0:15,0:15:39.10:0,39,630	0/0:15,0:15:36.09:0,36,616	1/1:8,0:8:16.73:150,17,0	1/1:10,0:7:17.74:170,18,0	1/1:13,0:13:24.28:287,24,0	1/1:10,0:9:26.88:472,27,0	0/0:24,0:24:72.21:0,72,1094	0/0:19,0:19:48.10:0,48,782	1/1:3,0:2:6.02:111,6,0
chr10	94461174	.	T	TGTGCATGG	17767.62	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-3.109;DP=503;FS=1.338;HRun=0;HaplotypeScore=167.6585;InbreedingCoeff=0.8846;MQ=64.05;MQ0=0;MQRankSum=-14.272;QD=57.50;ReadPosRankSum=0.206;VQSLOD=4.9417;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,114,2867	1/1:1,6:8:21.03:774,21,0	0/0:12,0:11:16.19:0,16,289	0/0:24,0:22:23.23:0,23,673	1/1:10,14:24:18.06:741,18,0	1/1:7,16:26:48.04:1704,48,0	1/1:8,6:14:14.96:419,15,0	1/1:27,3:31:33.09:901,33,0	1/1:5,7:12:27.05:956,27,0	1/1:7,12:19:51.17:2018,51,0	1/1:3,14:19:21.07:798,21,0	1/1:3,5:10:17.98:546,18,0	1/1:7,7:14:27.05:1031,27,0	1/1:3,9:12:27.05:1031,27,0	1/1:5,11:15:33.11:1391,33,0	1/1:8,12:20:39.13:1628,39,0	0/0:29,0:29:60.19:0,60,1480	1/1:0,7:10:21.07:887,21,0	0/0:17,0:17:42.14:0,42,1097	0/0:15,0:15:30.10:0,30,789	0/0:23,0:23:57.18:0,57,1376	1/1:3,6:10:9.03:379,9,0	1/1:0,9:9:18.06:758,18,0	1/1:7,4:11:12.04:506,12,0	1/1:3,5:9:12.04:506,12,0	0/1:23,0:22:53.55:54,0,1395	0/0:22,0:22:57.17:0,57,1389	1/1:4,5:11:18.06:739,18,0
chr10	94461670	.	TA	T	12804.57	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=17.839;DP=524;FS=6.350;HRun=1;HaplotypeScore=99.7610;InbreedingCoeff=0.9990;MQ=85.26;MQ0=0;MQRankSum=-1.977;QD=38.80;ReadPosRankSum=0.693;VQSLOD=4.8893;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1557	1/1:0,7:7:21.07:294,21,0	0/0:21,0:21:36.29:0,36,874	0/0:11,0:11:30.96:0,31,426	1/1:0,25:25:75.14:985,75,0	1/1:0,20:20:57.19:797,57,0	1/1:0,22:22:63.21:881,63,0	1/1:0,32:32:96.24:1228,96,0	1/1:0,14:14:39.13:545,39,0	1/1:0,21:21:63.17:843,63,0	1/1:0,16:16:45.11:607,45,0	1/1:0,19:19:54.18:755,54,0	1/1:0,16:16:45.15:629,45,0	1/1:0,11:11:33.11:462,33,0	1/1:0,20:20:57.19:797,57,0	1/1:0,9:9:27.09:378,27,0	0/0:23,0:23:69.16:0,69,1005	1/1:0,19:19:48.16:671,48,0	0/0:22,0:22:66.23:0,66,1055	0/0:18,0:18:54.17:0,54,835	0/0:18,0:17:54.12:0,54,811	1/1:0,15:15:42.05:543,42,0	1/1:0,25:25:59.95:838,60,0	1/1:0,15:15:42.14:587,42,0	1/1:0,13:13:36.12:503,36,0	0/0:24,0:24:72.20:0,72,1103	0/0:23,0:23:69.20:0,69,1054	1/1:0,11:11:33.11:461,33,0
chr10	94462245	.	G	GAAA	11194.21	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=10.081;DP=493;FS=1.870;HRun=7;HaplotypeScore=111.5186;InbreedingCoeff=0.9489;MQ=42.84;MQ0=13;MQRankSum=-8.121;QD=34.87;ReadPosRankSum=-1.250;VQSLOD=3.4323;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:63.03:0,63,698	1/1:3,5:8:15.05:311,15,0	0/0:4,0:3:6.02:0,6,82	0/0:5,0:2:3:0,3,41	1/1:5,10:16:24.02:397,24,0	1/1:1,13:13:27.09:546,27,0	1/1:8,7:15:33.11:610,33,0	1/1:11,14:26:48.10:892,48,0	1/1:2,13:15:27.09:559,27,0	1/1:10,12:22:48.06:825,48,0	1/1:6,18:24:45.07:772,45,0	1/1:4,9:14:21.07:410,21,0	1/1:1,17:17:38.89:757,39,0	1/1:4,10:14:27.07:476,27,0	1/1:5,10:15:33.11:629,33,0	1/1:5,9:15:30.10:597,30,0	0/0:23,0:23:39.07:0,39,476	1/1:9,9:20:39.09:710,39,0	0/0:17,0:16:42.13:0,42,572	0/0:23,0:22:60.19:0,60,799	0/0:22,0:21:54.15:0,54,718	1/1:7,16:25:39.13:758,39,0	1/1:6,12:18:39.05:662,39,0	1/1:2,5:7:18:269,18,0	1/1:3,11:14:33.07:642,33,0	0/0:21,0:21:57.19:0,57,777	0/0:22,0:22:60.15:0,60,785	1/1:1,10:10:18.06:373,18,0
chr10	94462257	.	C	CAAAAAAAAGAA	3902.30	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.395;DP=504;FS=0.000;HRun=0;HaplotypeScore=200.0444;InbreedingCoeff=0.8060;MQ=49.67;MQ0=11;MQRankSum=-5.088;QD=60.97;ReadPosRankSum=2.568;VQSLOD=2.9908;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,23:38:51.17:2684,51,0	0/0:5,0:5:12.04:0,12,339	0/0:7,0:5:15.05:0,15,341	0/0:8,0:5:3.56:0,4,150	0/0:21,0:20:42.14:0,42,820	0/0:13,0:13:1.76:0,2,723	0/0:15,0:14:39.12:0,39,768	0/0:29,0:29:72.23:0,72,1379	0/0:21,0:20:42.10:0,42,869	0/0:17,0:16:39.13:0,39,854	0/0:26,0:25:60.02:0,60,1042	0/0:10,0:10:21.06:0,21,502	0/0:19,0:18:39.11:0,39,891	0/0:13,0:12:30.07:0,30,538	0/0:13,0:13:33.08:0,33,574	0/0:15,0:15:42.14:0,42,941	1/1:11,7:25:27.05:1218,27,0	0/0:23,0:22:57.17:0,57,1243	0/0:17,0:17:48.14:0,48,1161	0/0:20,0:20:51.15:0,51,1409	0/0:22,0:21:60.19:0,60,1619	0/0:22,0:21:48.15:0,48,920	0/0:18,0:16:33.08:0,33,716	0/0:8,0:8:13.26:0,13,291	0/0:15,0:15:39.13:0,39,975	0/0:25,0:25:57.12:0,57,1343	0/0:30,0:30:81.19:0,81,1825	0/0:8,0:7:21.06:0,21,519
chr10	94463432	.	C	CATAATTCAATAATT	28505.55	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-3.760;DP=594;FS=10.051;HRun=0;HaplotypeScore=197.7653;InbreedingCoeff=0.8846;MQ=76.38;MQ0=0;MQRankSum=-14.444;QD=71.09;ReadPosRankSum=-5.581;VQSLOD=2.4732;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,99,3170	1/1:7,5:12:12.04:808,12,0	0/0:18,0:18:33.64:0,34,623	0/0:15,0:15:17.08:0,17,494	1/1:12,21:34:53.99:2319,54,0	1/1:10,15:27:33.11:2050,33,0	1/1:13,0:13:26.99:810,27,0	1/1:45,0:45:72.08:3002,72,0	1/1:3,11:16:21.07:1130,21,0	1/1:10,15:26:51.16:2703,51,0	1/1:8,12:20:36.12:1904,36,0	1/1:5,6:13:12.04:648,12,0	1/1:14,8:23:36.12:1924,36,0	1/1:3,13:16:18.06:1215,18,0	1/1:8,15:23:30.10:1894,30,0	1/1:5,8:15:12.04:687,12,0	0/0:17,0:17:30.09:0,30,986	1/1:13,2:16:24.08:1322,24,0	0/0:16,0:16:25.75:0,26,796	0/0:40,0:40:99:0,102,3492	0/0:18,0:18:42.14:0,42,1570	1/1:6,5:11:21.07:942,21,0	1/1:8,19:27:30.10:1944,30,0	1/1:7,0:7:15.04:581,15,0	1/1:9,14:24:33.11:2098,33,0	0/1:24,0:24:99:146,0,1572	0/0:31,0:31:69.20:0,69,2489	1/1:5,4:9:9.03:381,9,0
chr10	94464434	.	A	AC	18698.99	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=13.005;DP=655;FS=14.239;HRun=3;HaplotypeScore=170.3092;InbreedingCoeff=0.9998;MQ=74.32;MQ0=0;MQRankSum=-5.455;QD=37.70;ReadPosRankSum=2.358;VQSLOD=2.3076;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:38:99:1386,99,0	1/1:1,15:16:45.15:630,45,0	0/0:19,0:19:39.64:0,40,499	0/0:18,0:18:27.49:0,27,486	1/1:1,30:31:75.25:1047,75,0	1/1:4,20:24:60.20:839,60,0	1/1:1,16:17:45.15:630,45,0	1/1:3,29:32:87.29:1216,87,0	1/1:1,18:19:54.18:756,54,0	1/1:2,18:20:48.16:670,48,0	1/1:1,21:22:54.18:754,54,0	1/1:1,20:21:57.19:798,57,0	1/1:2,17:19:51.17:713,51,0	1/1:0,18:18:54.18:756,54,0	1/1:0,31:31:93.31:1301,93,0	1/1:1,25:26:72.24:1001,72,0	1/1:1,30:31:78.26:1092,78,0	1/1:0,24:24:69.23:957,69,0	0/0:18,0:18:51.14:0,51,601	0/0:31,0:31:93.28:0,93,1114	0/0:21,0:21:63.19:0,63,756	1/1:1,26:27:78.26:1090,78,0	1/1:1,24:25:69.23:965,69,0	1/1:2,24:26:66.22:923,66,0	1/1:0,15:15:45.15:630,45,0	0/0:23,0:23:69.21:0,69,828	0/0:29,0:29:84.26:0,84,1008	1/1:0,14:14:39.13:545,39,0
chr10	94464712	.	GGGAA	G	7557.72	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=16.857;DP=437;FS=14.961;HRun=0;HaplotypeScore=168.9782;InbreedingCoeff=0.9276;MQ=65.85;MQ0=1;MQRankSum=-15.950;QD=39.16;ReadPosRankSum=6.441;VQSLOD=3.9282;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,154,4366	1/1:0,1:1:3.01:47,3,0	0/0:27,0:24:66.18:0,66,1789	0/0:25,0:18:51.18:0,51,1492	1/1:0,4:4:6.02:91,6,0	1/1:0,10:10:27.09:413,27,0	1/1:1,12:13:35.61:513,36,0	1/1:1,6:7:21.07:336,21,0	1/1:1,9:10:14.64:195,15,0	1/1:0,10:9:26.92:400,27,0	1/1:0,6:5:9.03:136,9,0	1/1:0,16:16:48.16:733,48,0	1/1:1,16:17:50.91:744,51,0	1/1:0,26:26:78.26:1178,78,0	1/1:0,14:14:39.13:592,39,0	1/1:1,16:17:45.14:668,45,0	0/0:35,0:35:99:0,105,3043	1/1:0,10:10:18.06:288,18,0	0/0:17,0:17:48.16:0,48,1387	0/0:15,0:15:45.15:0,45,1309	0/0:27,0:27:78.27:0,78,2256	1/1:1,5:6:18.06:277,18,0	1/1:0,5:5:12.03:165,12,0	1/1:1,10:11:21.07:314,21,0	1/1:0,3:3:9.03:138,9,0	0/0:26,0:26:75.26:0,75,2168	0/0:21,0:21:63.22:0,63,1788	1/1:0,7:7:21.07:330,21,0
chr10	94464717	.	TCCTAAACCCCAC	T	16128.08	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=16.850;DP=438;FS=13.900;HRun=0;HaplotypeScore=203.2517;InbreedingCoeff=0.9250;MQ=61.83;MQ0=1;MQRankSum=-16.317;QD=86.25;ReadPosRankSum=6.590;VQSLOD=3.4804;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,151,9169	1/1:0,1:1:3.01:100,3,0	0/0:28,0:23:69.16:0,69,3124	0/0:26,0:14:39.13:0,39,2091	1/1:0,4:4:6.02:197,6,0	1/1:0,10:10:30.09:917,30,0	1/1:1,12:13:36.12:1119,36,0	1/1:0,6:6:18.06:608,18,0	1/1:0,9:9:12.04:397,12,0	1/1:0,10:9:27.09:877,27,0	1/1:0,6:5:9.03:295,9,0	1/1:0,16:16:48.16:1581,48,0	1/1:0,16:16:48.16:1579,48,0	1/1:0,26:26:78.27:2555,78,0	1/1:0,14:14:39.13:1280,39,0	1/1:0,16:16:42.14:1384,42,0	0/0:36,0:36:99:0,108,5514	1/1:0,10:10:21.07:635,21,0	0/0:20,0:20:60.21:0,60,3149	0/0:14,0:14:42.14:0,42,2472	0/0:29,0:29:84.29:0,84,5006	1/1:0,5:5:15.05:492,15,0	1/1:0,5:5:12.04:375,12,0	1/1:0,10:10:27.06:740,27,0	1/1:0,3:3:9.03:297,9,0	0/0:24,0:24:66.23:0,66,3853	0/0:23,0:23:69.24:0,69,3912	1/1:0,7:7:21.07:701,21,0
chr10	94464989	.	A	AACAC	1962.04	PASS	AB=1.000;AC=25;AF=0.543;AN=46;BaseQRankSum=-4.745;DP=419;FS=19.225;HRun=0;HaplotypeScore=108.3410;InbreedingCoeff=0.6585;MQ=55.57;MQ0=21;MQRankSum=2.497;QD=9.43;ReadPosRankSum=-3.860;VQSLOD=0.2524;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:16:5.88:0,6,42	1/1:3,0:3:3.01:67,3,0	./.	./.	./.	0/0:12,0:11:12.96:0,13,113	0/0:14,0:14:3.47:0,3,29	1/1:30,0:28:21.02:242,21,0	1/1:13,0:13:6.48:62,6,0	1/1:10,0:10:21.06:320,21,0	0/1:10,0:9:0:0,0,0	0/0:11,0:11:12.08:0,12,94	0/0:10,0:10:18.02:0,18,167	0/0:4,0:4:3:0,3,28	1/1:15,0:14:2.99:23,3,0	0/0:9,0:8:2.74:0,3,12	0/0:13,0:20:16.50:0,16,144	1/1:8,0:8:2.99:24,3,0	1/1:9,5:15:21.07:396,21,0	1/1:12,6:21:14.62:203,15,0	1/1:15,11:29:8.77:154,9,0	./.	0/0:12,0:12:0.26:0,0,2	0/0:22,0:21:11.75:0,12,108	1/1:8,0:7:2.22:7,2,0	1/1:9,7:18:31.16:411,31,0	1/1:9,9:25:9.03:213,9,0	./.
chr10	94465016	.	ACACACAC	A	1176.68	PASS	AB=0.979;AC=20;AF=0.370;AN=54;BaseQRankSum=8.191;DP=438;FS=5.114;HRun=0;HaplotypeScore=92.4876;InbreedingCoeff=0.1376;MQ=43.23;MQ0=49;MQRankSum=-7.436;QD=6.13;ReadPosRankSum=0.435;VQSLOD=1.5970;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:20.54:0,21,649	0/1:3,0:3:0:0,0,0	0/0:17,0:5:9.92:0,10,159	0/0:32,0:6:17.64:0,18,179	./.	0/1:14,2:13:44.85:209,0,45	0/1:12,0:12:22.58:53,0,23	0/1:27,0:23:99:316,0,948	0/1:14,0:11:29.54:30,0,381	0/1:14,0:12:85.58:86,0,663	0/0:9,0:7:0.47:0,0,1	1/1:16,0:14:12.68:125,13,0	1/1:9,0:8:17.81:123,18,0	1/1:5,0:3:5.93:40,6,0	0/1:12,0:11:89.38:118,0,89	0/0:14,0:10:5.99:0,6,70	0/1:18,0:18:25.77:26,0,283	0/0:8,0:4:6.02:0,6,205	0/0:18,0:16:48.16:0,48,1285	0/0:22,0:21:37.27:0,37,1110	0/0:31,0:31:45.15:0,45,958	1/1:3,0:3:2.97:20,3,0	1/1:11,0:7:7.94:35,8,0	0/1:16,2:15:51.11:125,0,51	0/1:14,0:12:38.54:39,0,95	0/0:27,0:25:72.24:0,72,2036	0/0:30,0:30:48.16:0,48,1205	0/0:11,0:5:9.03:0,9,224
chr10	94465018	.	ACACAC	A	2413.18	PASS	AB=0.957;AC=22;AF=0.407;AN=54;BaseQRankSum=6.587;DP=430;FS=2.979;HRun=0;HaplotypeScore=78.3473;InbreedingCoeff=0.3017;MQ=43.52;MQ0=49;MQRankSum=-6.891;QD=12.84;ReadPosRankSum=0.287;VQSLOD=2.6661;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:5.71:0,6,571	0/1:4,0:4:0:0,0,0	0/0:17,0:5:10.29:0,10,147	0/0:30,0:6:17.54:0,18,179	./.	1/1:5,9:11:21.07:398,21,0	1/1:2,9:11:12.02:184,12,0	0/1:27,0:23:99:358,0,709	0/1:14,0:11:29.54:30,0,284	0/1:15,0:12:85.58:86,0,500	0/0:9,0:7:0.47:0,0,1	1/1:2,14:14:23.99:399,24,0	1/1:1,8:8:18.06:399,18,0	1/1:2,3:3:5.98:87,6,0	0/1:12,0:11:49.09:118,0,49	0/0:14,0:10:6.02:0,6,68	0/1:17,0:17:73.79:74,0,219	0/0:8,0:4:6.02:0,6,166	0/0:17,0:16:48.16:0,48,1049	0/0:21,0:20:37.27:0,37,896	0/0:31,0:31:45.15:0,45,783	1/1:2,0:2:2.97:20,3,0	1/1:4,7:7:8.92:169,9,0	0/1:8,9:14:32.48:230,0,32	0/1:14,0:12:38.54:39,0,69	0/0:27,0:25:72.24:0,72,1640	0/0:29,0:29:45.15:0,45,913	0/0:11,0:5:9.03:0,9,173
chr10	94465022	.	AC	A	1375.51	PASS	AB=0.929;AC=21;AF=0.389;AN=54;BaseQRankSum=7.876;DP=417;FS=0.633;HRun=1;HaplotypeScore=63.6811;InbreedingCoeff=0.3758;MQ=44.20;MQ0=47;MQRankSum=-6.538;QD=8.00;ReadPosRankSum=-0.718;VQSLOD=0.4950;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,1:22:36.15:0,36,515	0/1:3,1:4:0:0,0,0	0/0:11,0:2:0.89:0,1,34	0/0:24,0:6:17.54:0,18,179	./.	1/1:13,1:11:20.82:184,21,0	1/1:11,0:11:11.97:116,12,0	0/1:29,0:25:99:460,0,307	0/1:11,2:10:44.23:44,0,80	0/1:12,3:12:99:100,0,110	0/0:11,0:9:0.47:0,0,1	1/1:14,2:14:22.31:154,22,0	1/1:8,1:8:17.70:111,18,0	1/1:3,2:3:5.92:39,6,0	0/1:13,0:12:11.72:115,0,12	0/0:9,4:9:2.04:0,2,6	0/0:17,0:17:26.25:0,26,321	0/0:5,2:3:6.02:0,6,86	0/0:17,0:16:48.07:0,48,566	0/0:21,0:20:36.78:0,37,507	0/0:31,0:31:45.13:0,45,540	1/1:0,2:2:2.97:20,3,0	1/1:11,0:7:9.03:110,9,0	0/1:16,0:14:4.17:58,0,4	0/1:14,0:12:17.70:38,0,18	0/0:24,1:23:59.50:0,59,870	0/0:29,0:29:42.12:0,42,523	0/0:12,0:6:6.02:0,6,77
chr10	94465025	.	C	CAAA	3141.88	PASS	AB=0.743;AC=30;AF=0.577;AN=52;BaseQRankSum=2.110;DP=408;FS=0.000;HRun=1;HaplotypeScore=69.7060;InbreedingCoeff=0.6628;MQ=44.27;MQ0=41;MQRankSum=-6.192;QD=15.25;ReadPosRankSum=0.094;VQSLOD=0.1281;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:36.33:0,36,732	1/1:4,0:4:3.45:23,3,0	0/1:8,0:2:2.85:3,0,47	0/0:18,0:6:18.05:0,18,257	./.	1/1:13,0:11:19.58:211,20,0	1/1:9,1:10:11.63:163,12,0	0/1:10,19:27:99:933,0,133	0/1:9,3:10:1.01:278,0,1	1/1:4,11:12:12.68:651,13,0	0/1:4,7:9:0:0,0,0	1/1:17,0:15:22.62:197,23,0	1/1:9,0:8:15.89:62,16,0	1/1:5,0:3:5.69:50,6,0	1/1:4,9:12:17.07:281,17,0	1/1:8,0:12:5.95:59,6,0	0/0:18,0:18:42.12:0,42,597	0/0:7,0:3:3:0,3,26	0/0:17,0:16:36.37:0,36,463	0/0:21,0:20:34.08:0,34,489	0/0:28,0:28:31.24:0,31,531	1/1:2,0:2:5.99:61,6,0	1/1:10,0:6:9.03:168,9,0	1/1:14,0:12:10.18:38,10,0	1/1:3,12:13:9.03:151,9,0	0/0:26,0:25:62.59:0,63,850	0/0:28,0:28:26.44:0,26,449	./.
chr10	94465817	.	T	TG	93.54	PASS	AC=4;AF=0.286;AN=14;BaseQRankSum=3.319;DP=266;FS=0.000;HRun=1;HaplotypeScore=19.5319;MQ=28.45;MQ0=53;MQRankSum=-1.277;QD=8.50;ReadPosRankSum=-1.518;VQSLOD=0.2225;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:5,1:2:3.01:45,3,0	0/0:26,0:9:24.08:0,24,311	0/0:39,0:31:33.11:0,33,421	0/0:33,0:27:35.89:0,36,385	./.	./.	./.	./.	0/0:23,0:18:48.16:0,48,621	0/0:33,0:32:44.60:0,45,543	1/1:2,3:4:9.03:134,9,0
chr10	94466456	.	T	TAGA	10312.47	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-4.423;DP=513;FS=7.042;HRun=0;HaplotypeScore=81.2928;InbreedingCoeff=0.9698;MQ=65.41;MQ0=0;MQRankSum=-0.852;QD=48.87;ReadPosRankSum=0.295;VQSLOD=6.7044;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,13:24:55.32:1050,55,0	0/0:8,0:8:24.08:0,24,388	0/0:6,0:6:4.11:0,4,204	0/0:7,0:7:21.07:0,21,339	0/0:29,0:29:84.29:0,84,1347	1/1:2,28:31:78.27:1742,78,0	1/1:2,10:12:24.08:536,24,0	1/1:6,21:29:72.23:1476,72,0	0/0:16,0:16:45.15:0,45,726	0/0:22,0:22:57.19:0,57,918	0/0:28,0:28:75.26:0,75,1224	1/1:0,13:12:30.10:670,30,0	1/1:0,11:11:27.09:602,27,0	1/1:1,15:17:33.11:737,33,0	0/0:18,0:18:51.14:0,51,801	0/0:14,0:14:39.13:0,39,629	1/1:1,11:14:27.09:603,27,0	0/0:12,0:12:30.07:0,30,458	0/0:11,0:11:30.10:0,30,483	0/0:35,0:35:96.33:0,96,1564	0/0:18,0:18:54.17:0,54,855	1/1:1,15:18:45.11:957,45,0	1/1:3,18:21:45.15:1002,45,0	1/1:1,13:14:33.11:737,33,0	0/0:14,0:14:33.11:0,33,539	0/0:35,0:35:99:0,102,1666	0/0:29,0:29:78.25:0,78,1250	1/1:1,5:6:9.03:201,9,0
chr10	94466555	.	CA	C	2251.49	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-1.703;DP=529;FS=1.361;HRun=11;HaplotypeScore=77.0377;InbreedingCoeff=0.9600;MQ=65.71;MQ0=0;MQRankSum=-2.304;QD=15.64;ReadPosRankSum=1.674;VQSLOD=4.4135;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:82.56:0,83,522	0/0:6,0:6:12.02:0,12,120	0/0:13,0:13:17.50:0,17,133	0/0:11,0:10:9.77:0,10,87	0/0:28,1:29:44.54:0,45,674	1/1:1,19:20:50.94:419,51,0	1/1:4,13:18:29:228,29,0	0/0:24,0:24:57.13:0,57,597	0/0:18,0:19:39.05:0,39,403	0/0:21,0:21:45.11:0,45,479	0/0:24,0:24:54.12:0,54,568	1/1:5,13:18:3.96:239,4,0	1/1:2,13:15:38.94:320,39,0	1/1:3,8:11:23.94:197,24,0	0/0:18,0:18:48.11:0,48,505	0/0:19,0:19:42.10:0,42,446	0/0:5,0:12:28.85:0,29,177	1/1:1,7:8:17.97:148,18,0	0/0:16,0:17:32.94:0,33,329	0/0:26,1:27:32.50:0,32,551	0/0:21,0:21:51.11:0,51,530	1/1:5,15:20:41.93:345,42,0	1/1:9,14:23:41.92:345,42,0	1/1:2,9:11:26.97:222,27,0	0/0:15,0:15:33.04:0,33,339	0/0:29,0:29:69.13:0,69,711	0/0:35,1:36:53.83:0,54,768	0/0:11,0:11:27.07:0,27,288
chr10	94466574	.	G	GA	5309.19	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=0.232;DP=489;FS=2.751;HRun=6;HaplotypeScore=66.4416;InbreedingCoeff=0.9860;MQ=74.19;MQ0=0;MQRankSum=-3.934;QD=29.66;ReadPosRankSum=2.743;VQSLOD=5.6831;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,25:33:78.25:981,78,0	1/1:1,3:4:9.03:113,9,0	0/0:12,0:12:29.84:0,30,281	0/0:10,0:10:13.89:0,14,185	1/1:5,26:31:78.25:969,78,0	0/0:20,0:20:48.11:0,48,490	0/0:17,0:17:36.06:0,36,360	0/0:25,0:25:69.15:0,69,704	1/1:3,9:12:24.08:302,24,0	1/1:2,19:21:54.17:679,54,0	1/1:3,18:21:48.15:604,48,0	0/0:16,0:16:36.06:0,36,361	0/0:13,0:13:30.06:0,30,306	0/0:12,0:12:33.06:0,33,329	1/1:1,13:14:36.12:453,36,0	1/1:1,16:17:39.12:491,39,0	0/0:10,0:10:24.05:0,24,245	1/1:3,8:11:18.06:226,18,0	0/0:17,0:17:42.09:0,42,429	0/0:21,0:21:48.10:0,48,490	0/0:23,0:23:66.10:0,66,657	0/0:18,0:18:45.10:0,45,459	0/0:17,0:17:48.11:0,48,490	0/0:10,0:10:27.06:0,27,275	1/1:1,14:15:39.12:491,39,0	0/0:26,0:26:75.17:0,75,765	0/0:30,0:30:72.16:0,72,734	0/0:13,0:13:36.08:0,36,367
chr10	94466798	.	ATC	A	5284.84	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.611;DP=519;FS=0.000;HRun=0;HaplotypeScore=63.3691;InbreedingCoeff=0.9943;MQ=61.63;MQ0=7;MQRankSum=2.320;QD=38.86;ReadPosRankSum=1.366;VQSLOD=6.7227;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.28:0,81,1479	0/0:5,0:5:15.04:0,15,244	0/0:21,0:10:27.09:0,27,478	0/0:22,0:12:27.05:0,27,459	0/0:14,0:14:33.11:0,33,605	1/1:2,17:19:51.17:729,51,0	1/1:0,25:25:72.24:1031,72,0	0/0:36,0:34:96.30:0,96,1681	0/0:19,0:19:57.20:0,57,1044	0/0:17,0:17:48.16:0,48,876	0/0:15,0:14:39.13:0,39,715	1/1:0,14:14:39.13:559,39,0	1/1:1,9:10:27.09:387,27,0	1/1:0,14:14:39.13:559,39,0	0/0:16,0:16:48.15:0,48,850	0/0:21,0:21:63.22:0,63,1155	0/0:40,0:39:99:0,120,2156	0/0:33,0:33:99:0,99,1814	0/0:11,0:10:24.04:0,24,405	0/0:22,0:22:57.19:0,57,1039	0/0:23,0:23:66.23:0,66,1209	1/1:1,18:19:45.15:645,45,0	1/1:0,19:19:48.16:687,48,0	1/1:0,16:16:48.16:688,48,0	0/0:9,0:8:21.07:0,21,385	0/0:15,0:15:39.13:0,39,715	0/0:11,0:11:30.10:0,30,550	0/0:6,0:6:18.06:0,18,330
chr10	94468394	.	G	GAC	5682.71	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-2.544;DP=491;FS=7.880;HRun=0;HaplotypeScore=89.9360;InbreedingCoeff=0.9945;MQ=65.74;MQ0=1;MQRankSum=-3.675;QD=35.30;ReadPosRankSum=1.527;VQSLOD=6.6926;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,14:26:51.14:806,51,0	0/0:6,0:6:15.05:0,15,195	0/0:20,0:17:35.96:0,36,385	0/0:17,0:16:38.69:0,39,458	0/0:29,0:29:78.20:0,78,980	1/1:4,9:13:33.10:533,33,0	1/1:10,11:21:54.12:795,54,0	0/0:23,0:23:54.13:0,54,671	0/0:14,0:14:30.08:0,30,376	0/0:20,0:20:54.17:0,54,681	0/0:15,0:15:45.13:0,45,571	1/1:5,10:15:39.09:585,39,0	1/1:4,11:15:39.08:580,39,0	1/1:2,7:9:18.04:278,18,0	0/0:12,0:12:30.08:0,30,376	0/0:14,0:14:24.08:0,24,312	1/1:11,11:21:45.09:663,45,0	0/0:18,0:18:29.85:0,30,337	0/0:27,0:27:63.16:0,63,761	0/0:21,0:21:60.17:0,60,750	0/0:30,0:30:57.12:0,57,679	1/1:0,13:13:29.51:509,30,0	1/1:3,12:15:36.11:578,36,0	1/1:0,11:11:21.07:356,21,0	0/0:20,0:20:45.09:0,45,528	0/0:24,0:24:63.19:0,63,794	0/0:9,0:9:21.05:0,21,255	0/0:11,0:11:33.04:0,33,368
chr10	94468420	.	A	AAT	4438.57	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-0.965;DP=385;FS=0.000;HRun=0;HaplotypeScore=84.2158;InbreedingCoeff=0.9495;MQ=71.90;MQ0=1;MQRankSum=-2.020;QD=15.74;ReadPosRankSum=1.570;VQSLOD=4.7476;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:43.26:231,43,0	1/1:8,0:8:20.13:108,20,0	0/0:22,0:10:6.06:0,6,135	0/0:18,0:13:20.21:0,20,173	1/1:26,0:26:68.65:379,69,0	1/1:20,0:20:52.13:332,52,0	1/1:7,0:7:20.26:132,20,0	1/1:26,0:26:69.13:387,69,0	1/1:11,0:11:17.25:93,17,0	1/1:21,0:21:57.95:355,58,0	1/1:17,0:17:36.62:194,37,0	1/1:8,0:8:17.37:100,17,0	1/1:11,0:11:28.55:146,29,0	1/1:8,0:8:23.24:140,23,0	1/1:7,0:7:14.38:77,14,0	1/1:12,0:12:23.08:127,23,0	1/1:2,13:16:45.14:762,45,0	1/1:16,0:16:31.63:169,32,0	0/0:21,0:21:50.86:0,51,207	0/0:10,0:10:23.43:0,23,106	0/0:6,0:6:14:0,14,97	1/1:6,0:6:14.82:109,15,0	1/1:11,0:11:31.92:188,32,0	1/1:6,0:6:11.35:57,11,0	1/1:22,0:22:48.88:262,49,0	0/0:19,0:19:36.37:0,36,274	0/0:7,0:7:12.39:0,12,60	1/1:6,0:6:17.22:91,17,0
chr10	94468421	.	A	AT	5602.78	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-4.192;DP=374;FS=17.658;HRun=9;HaplotypeScore=71.8339;InbreedingCoeff=0.5918;MQ=73.37;MQ0=1;MQRankSum=-1.679;QD=15.92;ReadPosRankSum=3.248;VQSLOD=3.6777;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:41.69:309,42,0	1/1:8,0:8:20.59:125,21,0	0/0:22,0:10:8.53:0,9,64	0/1:18,0:13:2.12:2,0,66	1/1:24,0:24:64.97:413,65,0	1/1:20,0:20:53.31:364,53,0	1/1:7,0:7:20.80:153,21,0	1/1:25,0:25:66.91:376,67,0	1/1:11,0:11:17.65:107,18,0	1/1:20,0:20:51.97:282,52,0	1/1:15,0:15:32.40:205,32,0	1/1:7,0:7:14.87:111,15,0	1/1:10,0:10:29.82:235,30,0	1/1:8,0:8:17.86:135,18,0	1/1:6,0:6:14.72:90,15,0	1/1:12,0:12:23.55:144,24,0	1/1:16,0:16:38.73:175,39,0	1/1:17,0:17:32.48:207,32,0	1/1:1,19:20:57.11:611,57,0	1/1:1,8:9:21.06:232,21,0	1/1:3,3:6:6.02:66,6,0	1/1:5,0:5:2.96:19,3,0	1/1:11,0:11:26.70:195,27,0	1/1:5,0:6:11.98:98,12,0	1/1:22,0:22:50:305,50,0	1/1:8,11:19:38.95:387,39,0	1/1:1,6:7:12.03:133,12,0	1/1:6,0:6:17.77:121,18,0
chr10	94468422	.	T	TA	9734.09	PASS	AB=0.984;AC=47;AF=0.839;AN=56;BaseQRankSum=-2.852;DP=377;FS=0.864;HRun=3;HaplotypeScore=57.0389;InbreedingCoeff=0.3909;MQ=72.74;MQ0=1;MQRankSum=-4.072;QD=29.59;ReadPosRankSum=6.180;VQSLOD=3.8791;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:45.07:611,45,0	1/1:0,8:8:21.07:300,21,0	0/0:23,0:9:10.54:0,11,146	0/0:19,0:14:0.90:0,1,133	1/1:0,24:24:72.07:968,72,0	1/1:2,17:19:54.18:766,54,0	1/1:1,6:7:21.07:296,21,0	1/1:0,25:25:75.22:1032,75,0	1/1:0,11:11:18.06:257,18,0	1/1:0,20:20:60.16:818,60,0	1/1:0,14:14:38.97:496,39,0	1/1:1,6:7:18.05:237,18,0	1/1:0,10:10:30.10:420,30,0	1/1:2,6:8:24.05:304,24,0	1/1:0,6:6:15.05:214,15,0	1/1:0,12:12:24.08:343,24,0	1/1:16,0:16:44.50:320,44,0	1/1:0,17:17:33.11:471,33,0	1/1:22,0:22:5.65:70,6,0	0/1:9,0:9:23.15:23,0,26	0/0:6,0:6:0.69:0,1,68	1/1:4,1:5:14.96:137,15,0	1/1:2,9:11:33.08:421,33,0	1/1:1,4:5:12.03:166,12,0	1/1:0,22:22:51.17:729,51,0	0/1:19,1:20:59.31:59,0,125	0/1:7,0:7:14.52:20,0,15	1/1:0,6:6:18.06:256,18,0
chr10	94468980	.	TG	T	6841.19	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.037;DP=592;FS=9.778;HRun=3;HaplotypeScore=54.1290;InbreedingCoeff=0.9866;MQ=87.39;MQ0=0;MQRankSum=-2.672;QD=31.53;ReadPosRankSum=5.126;VQSLOD=4.0588;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:72.23:891,72,0	0/0:14,0:14:42.13:0,42,586	0/0:22,0:22:63.01:0,63,810	0/0:18,0:18:47.79:0,48,526	0/0:25,0:25:72.22:0,72,1000	1/1:1,21:22:57.18:706,57,0	1/1:1,17:18:45.14:557,45,0	0/0:23,0:23:69.22:0,69,963	0/0:17,0:17:51.17:0,51,733	0/0:27,0:27:81.25:0,81,1105	0/0:18,0:18:54.17:0,54,760	1/1:2,16:18:48.15:594,48,0	1/1:0,20:20:48.15:595,48,0	1/1:2,13:15:7.03:346,7,0	0/0:21,0:21:63.17:0,63,850	0/0:24,0:24:72.21:0,72,999	1/1:2,21:23:23.05:737,23,0	0/0:22,0:22:66.21:0,66,931	0/0:15,0:15:36.10:0,36,482	0/0:18,0:18:54.18:0,54,776	0/0:21,0:21:60.14:0,60,789	1/1:0,19:19:54.17:669,54,0	1/1:1,27:28:72.23:892,72,0	1/1:0,25:25:69.22:855,69,0	0/0:21,0:21:63.20:0,63,888	0/0:22,0:22:60.20:0,60,864	0/0:36,0:36:99:0,105,1504	0/0:11,0:11:33.10:0,33,451
chr10	94469577	.	A	AT	6617.95	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-15.048;DP=591;FS=5.609;HRun=8;HaplotypeScore=57.6704;InbreedingCoeff=0.9834;MQ=75.90;MQ0=0;MQRankSum=-1.075;QD=27.69;ReadPosRankSum=0.334;VQSLOD=5.4238;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:53.90:0,54,482	1/1:0,10:10:30.09:346,30,0	0/0:15,0:15:5.67:0,6,204	0/0:12,0:12:22.94:0,23,227	1/1:2,32:34:90.20:1022,90,0	0/0:29,0:29:75.01:0,75,682	0/0:19,0:19:53.98:0,54,480	1/1:6,27:33:56.79:907,57,0	1/1:3,15:18:45.07:503,45,0	1/1:4,18:22:54.16:623,54,0	1/1:3,23:26:60.09:675,60,0	0/0:16,0:16:45.02:0,45,412	0/0:21,0:21:57.03:0,57,522	0/0:16,0:16:45.02:0,45,412	1/1:5,16:21:42.12:485,42,0	1/1:4,12:16:36.11:416,36,0	0/0:15,0:17:41.05:0,41,363	1/1:0,17:17:45.13:519,45,0	0/0:16,0:16:29.98:0,30,270	0/0:32,1:33:52.43:0,52,734	0/0:17,0:19:50.06:0,50,445	0/0:23,0:23:63.01:0,63,570	0/0:22,0:22:60.03:0,60,548	0/0:11,0:11:30.02:0,30,275	1/1:5,21:26:60.18:692,60,0	0/0:29,1:30:52.42:0,52,731	0/0:33,0:33:89.16:0,89,779	1/1:1,14:16:38.95:430,39,0
chr10	94470979	.	A	AT	4266.71	PASS	AB=0.814;AC=23;AF=0.411;AN=56;BaseQRankSum=-8.493;DP=502;FS=0.000;HRun=11;HaplotypeScore=69.4897;InbreedingCoeff=0.6435;MQ=67.90;MQ0=0;MQRankSum=-0.078;QD=15.13;ReadPosRankSum=1.036;VQSLOD=5.3734;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,18:24:24.37:428,24,0	1/1:3,9:12:24.05:243,24,0	0/0:16,0:11:11.90:0,12,73	0/1:12,0:8:0.89:17,0,1	1/1:5,18:23:21.84:392,22,0	0/1:22,1:23:72.14:72,0,101	0/0:15,0:15:23.40:0,23,104	0/0:25,0:27:52.80:0,53,398	1/1:1,18:19:48.10:487,48,0	1/1:5,21:26:57.09:570,57,0	1/1:6,13:19:18.56:332,19,0	0/0:17,0:17:36.71:0,37,145	0/0:6,0:6:13.77:0,14,52	0/0:10,0:10:20.36:0,20,84	0/1:6,12:19:13.57:225,0,14	1/1:4,7:11:18.04:183,18,0	1/1:11,16:29:15.24:386,15,0	1/1:3,28:31:75.11:751,75,0	0/0:32,0:32:65.60:0,66,500	0/0:9,0:10:16.96:0,17,122	0/0:6,0:6:17.44:0,17,125	0/0:14,0:14:27.15:0,27,120	0/0:11,0:11:20.53:0,21,92	0/1:16,1:17:26.52:27,0,74	0/1:4,12:16:10.71:153,0,11	0/0:13,0:13:5.39:0,5,220	0/0:21,0:21:53.77:0,54,418	0/0:18,0:20:45.90:0,46,337
chr10	94470990	.	TA	T	1012.66	PASS	AB=0.920;AC=13;AF=0.232;AN=56;BaseQRankSum=4.663;DP=486;FS=3.600;HRun=3;HaplotypeScore=78.2558;InbreedingCoeff=0.1590;MQ=66.98;MQ0=1;MQRankSum=-0.737;QD=5.56;ReadPosRankSum=-2.924;VQSLOD=-0.5213;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:50.33:304,50,0	0/0:10,0:10:26.90:0,27,210	0/0:17,0:10:3.78:0,4,113	0/1:16,0:9:14.88:15,0,37	0/0:25,0:25:62.78:0,63,528	0/1:20,0:20:12.51:13,0,34	0/1:11,1:12:26.51:57,0,27	0/0:21,0:21:58.40:0,58,713	0/0:18,0:18:50.81:0,51,396	0/0:25,0:25:71.73:0,72,577	0/0:19,0:20:59.56:0,60,483	0/1:16,2:18:25.83:125,0,26	0/1:5,2:7:2.77:86,0,3	0/1:11,1:12:9.14:80,0,9	0/0:18,0:18:41.77:0,42,380	0/0:10,0:10:26.95:0,27,234	1/1:25,0:25:38.86:244,39,0	0/0:29,0:29:74.32:0,74,569	0/0:28,0:28:81.19:0,81,987	0/0:10,0:10:21.94:0,22,253	0/0:7,0:7:18.05:0,18,221	0/1:15,0:15:26.98:45,0,27	0/1:11,2:13:15.96:111,0,16	0/1:14,2:16:15.25:98,0,15	0/0:12,0:12:20.96:0,21,185	0/0:16,0:16:45.09:0,45,514	0/0:20,0:20:60.17:0,60,771	0/0:18,0:18:46.50:0,46,596
chr10	94471271	.	A	AC	9209.32	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-7.263;DP=583;FS=1.027;HRun=1;HaplotypeScore=55.1354;InbreedingCoeff=0.9966;MQ=86.33;MQ0=0;MQRankSum=-3.456;QD=39.02;ReadPosRankSum=1.301;VQSLOD=5.3553;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:84.28:1257,84,0	0/0:5,0:5:15.05:0,15,195	0/0:28,0:28:78.25:0,78,1005	0/0:10,0:10:27.08:0,27,341	0/0:18,0:18:54.11:0,54,680	1/1:2,11:12:30.10:450,30,0	1/1:1,23:24:66.22:989,66,0	0/0:31,0:31:90.27:0,90,1133	0/0:24,0:24:69.22:0,69,896	0/0:19,0:19:57.18:0,57,737	0/0:12,0:12:33.11:0,33,428	1/1:0,23:23:57.19:854,57,0	1/1:1,27:28:75.25:1123,75,0	1/1:1,16:17:39.13:584,39,0	0/0:27,0:26:78.25:0,78,1012	0/0:14,0:14:42.14:0,42,545	1/1:0,40:40:99:1708,114,0	0/0:26,0:26:75.22:0,75,957	0/0:21,0:21:60.07:0,60,737	0/0:9,0:9:27.07:0,27,336	0/0:37,0:37:99:0,111,1395	1/1:0,16:16:42.14:628,42,0	1/1:0,15:15:39.13:582,39,0	1/1:0,24:24:69.23:1033,69,0	0/0:16,0:16:48.13:0,48,607	0/0:23,0:23:66.21:0,66,856	0/0:20,0:20:57.17:0,57,726	0/0:7,0:7:21.07:0,21,273
chr10	94471940	.	T	TA	3921.04	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=3.735;DP=544;FS=3.435;HRun=8;HaplotypeScore=70.6923;InbreedingCoeff=0.9824;MQ=77.23;MQ0=0;MQRankSum=-1.049;QD=26.86;ReadPosRankSum=2.144;VQSLOD=4.5676;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:95.08:0,95,857	0/0:4,0:4:12.01:0,12,109	0/0:19,0:19:32.94:0,33,283	0/0:16,0:16:23.56:0,24,239	0/0:25,0:25:65.64:0,66,604	1/1:3,13:16:36.11:415,36,0	1/1:1,7:8:18.05:208,18,0	1/1:6,20:26:63.14:703,63,0	0/0:22,0:22:51:0,51,462	0/0:17,1:18:10.39:0,10,350	0/0:22,0:22:38.46:0,38,525	1/1:3,18:21:45.13:519,45,0	1/1:4,16:20:45.13:518,45,0	1/1:1,12:13:33.10:381,33,0	0/0:22,0:22:59.99:0,60,539	0/0:18,0:18:51.03:0,51,467	0/0:36,0:36:90.04:0,90,824	0/0:22,0:22:60.03:0,60,549	0/0:28,0:28:72.03:0,72,659	0/0:18,0:18:51.03:0,51,467	0/0:14,0:14:42.02:0,42,384	1/1:2,5:7:12.04:138,12,0	1/1:1,10:11:30.09:346,30,0	1/1:2,11:13:33.10:381,33,0	0/0:22,0:22:57.03:0,57,521	0/0:23,0:23:63.03:0,63,576	0/0:33,0:33:90.04:0,90,824	1/1:0,11:11:27.08:312,27,0
chr10	94472158	.	A	AAATC	4010.40	PASS	AB=0.780;AC=18;AF=0.321;AN=56;BaseQRankSum=-0.397;DP=373;FS=1.011;HRun=0;HaplotypeScore=161.7533;InbreedingCoeff=0.7571;MQ=54.37;MQ0=0;MQRankSum=-7.359;QD=40.10;ReadPosRankSum=-1.029;VQSLOD=3.8165;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:19:99:278,0,183	0/0:12,0:12:27.07:0,27,427	0/0:6,0:6:4.01:0,4,78	0/0:3,0:3:2.32:0,2,76	0/0:21,0:20:54.14:0,54,873	1/1:7,11:18:48.13:1074,48,0	1/1:2,5:7:17.99:382,18,0	0/0:34,0:34:93.29:0,93,1553	0/0:10,0:10:27.05:0,27,389	0/0:15,0:15:42.14:0,42,740	0/0:14,0:14:30.09:0,30,499	1/1:7,4:11:24.06:487,24,0	1/1:5,3:8:21.04:380,21,0	1/1:6,3:9:24:434,24,0	0/0:9,0:9:24.08:0,24,425	0/0:10,0:10:27.07:0,27,424	0/1:10,0:12:75.67:208,0,76	0/0:22,0:20:48.08:0,48,761	0/0:20,0:20:42.14:0,42,725	0/0:21,0:21:54.14:0,54,850	0/0:5,0:5:14.95:0,15,166	1/1:1,1:2:6.02:136,6,0	1/1:4,2:6:15.05:305,15,0	1/1:7,1:8:17.96:326,18,0	0/0:23,0:23:60.18:0,60,1004	0/0:11,0:11:30.10:0,30,538	0/0:30,0:30:84.27:0,84,1471	0/0:7,0:7:15:0,15,181
chr10	94472485	.	TTG	T	4105.83	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-2.878;DP=538;FS=8.514;HRun=0;HaplotypeScore=116.5277;InbreedingCoeff=0.9859;MQ=67.88;MQ0=2;MQRankSum=4.562;QD=23.87;ReadPosRankSum=2.549;VQSLOD=4.4115;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:14.97:0,15,120	1/1:1,8:9:24.07:288,24,0	0/0:25,0:18:24.06:0,24,332	0/0:27,0:25:22.83:0,23,597	1/1:7,25:32:60.10:687,60,0	0/0:18,0:17:44.92:0,45,373	0/0:14,0:14:20.95:0,21,169	0/0:26,0:33:50.91:0,51,518	1/1:4,11:14:30.09:360,30,0	1/1:7,27:33:72.20:851,72,0	1/1:9,10:19:36.11:431,36,0	0/0:32,0:32:74.83:0,75,598	0/0:18,0:18:38.91:0,39,312	0/0:16,0:16:41.90:0,42,338	1/1:5,13:18:36.11:432,36,0	1/1:2,14:17:35.94:410,36,0	0/0:17,0:17:23.86:0,24,183	1/1:1,9:10:24.07:288,24,0	0/0:21,0:20:51.16:0,51,775	0/0:18,0:18:45.13:0,45,683	0/0:19,0:19:42.14:0,42,672	0/0:14,0:14:17.94:0,18,142	0/0:5,0:5:11.98:0,12,97	0/0:13,0:13:23.96:0,24,203	1/1:8,10:18:30.09:360,30,0	0/0:25,0:25:63.19:0,63,983	0/0:26,0:26:57.18:0,57,865	0/0:0,0:10:15:0,15,132
chr10	94472493	.	G	GTGTA	8709	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=6.919;DP=553;FS=0.392;HRun=0;HaplotypeScore=117.2513;InbreedingCoeff=0.8519;MQ=63.37;MQ0=2;MQRankSum=-11.723;QD=38.88;ReadPosRankSum=4.440;VQSLOD=5.2171;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:18:10.21:438,10,0	0/0:8,0:8:24.06:0,24,263	0/0:25,0:18:48.05:0,48,626	0/0:28,0:25:54.46:0,54,866	0/0:31,0:31:65.90:0,66,673	1/1:3,18:22:45.11:1116,45,0	1/1:2,14:18:21.07:558,21,0	0/1:31,0:31:99:142,0,367	0/0:15,0:14:33.06:0,33,353	0/0:32,0:31:90.14:0,90,937	0/0:18,0:18:48.07:0,48,491	1/1:1,29:31:75.26:2012,75,0	1/1:1,17:18:39.13:1047,39,0	1/1:0,16:20:42.14:1124,42,0	0/0:16,0:16:45.08:0,45,469	0/0:17,0:17:39.09:0,39,420	1/1:2,12:15:24.08:613,24,0	0/0:10,0:10:23.95:0,24,265	0/0:21,0:20:57.16:0,57,941	0/0:20,0:20:48.01:0,48,793	0/0:20,0:20:57.11:0,57,916	1/1:2,11:14:18.06:475,18,0	1/1:0,7:7:12.04:320,12,0	1/1:2,14:17:27.09:710,27,0	0/0:17,0:17:42.01:0,42,420	0/0:27,0:27:81.18:0,81,1315	0/0:24,0:24:66.16:0,66,1102	0/1:12,0:12:5.92:153,0,6
chr10	94472733	.	C	CA	376.62	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.996;DP=505;FS=20.657;HRun=2;HaplotypeScore=113.5449;InbreedingCoeff=0.9281;MQ=87.11;MQ0=0;MQRankSum=-3.556;QD=28.97;ReadPosRankSum=-0.939;VQSLOD=1.8024;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.24:0,78,1068	0/0:6,0:6:18.06:0,18,250	0/0:22,0:22:60.15:0,60,775	0/0:21,0:21:45.06:0,45,662	0/0:25,0:25:60.18:0,60,797	0/0:17,0:17:51.17:0,51,699	0/0:18,0:18:42.14:0,42,586	0/0:20,0:20:60.19:0,60,809	0/0:17,0:17:45.15:0,45,627	0/0:22,0:22:63.20:0,63,854	0/0:13,0:13:39.11:0,39,514	0/0:17,0:17:45.15:0,45,627	0/0:10,0:10:23.33:0,23,332	0/0:22,0:22:66.22:0,66,908	0/0:18,0:18:48.14:0,48,641	0/0:18,0:18:54.18:0,54,752	1/1:0,13:13:30.10:471,30,0	0/0:16,0:16:48.16:0,48,669	0/0:17,0:17:51.17:0,51,710	0/0:9,0:9:27.09:0,27,365	0/0:53,0:53:99:0,160,2218	0/0:13,0:13:36.12:0,36,501	0/0:7,0:7:18.53:0,19,252	0/0:24,0:24:57.19:0,57,788	0/0:15,0:15:45.15:0,45,618	0/0:23,0:23:66.07:0,66,919	0/0:18,0:18:48.16:0,48,659	0/0:3,0:3:9.03:0,9,126
chr10	94472740	.	C	CA	6574.47	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.182;DP=491;FS=4.056;HRun=0;HaplotypeScore=92.2782;InbreedingCoeff=0.9885;MQ=86.13;MQ0=0;MQRankSum=-3.952;QD=41.61;ReadPosRankSum=2.156;VQSLOD=5.4291;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:72.20:1121,72,0	0/0:6,0:6:18.06:0,18,251	0/0:21,0:21:57.19:0,57,782	0/0:20,0:20:57.18:0,57,771	0/0:24,0:24:66.22:0,66,916	1/1:0,15:15:36.12:573,36,0	1/1:0,16:16:39.13:623,39,0	0/0:19,0:19:57.18:0,57,779	0/0:16,0:16:42.14:0,42,575	0/0:21,0:21:60.20:0,60,838	0/0:15,0:15:42.14:0,42,574	1/1:0,17:17:45.15:717,45,0	1/1:0,10:10:30.10:478,30,0	1/1:0,20:20:57.19:909,57,0	0/0:17,0:17:41.99:0,42,585	0/0:17,0:17:51.17:0,51,698	1/1:1,11:12:24.08:382,24,0	0/0:15,0:15:39.13:0,39,545	0/0:19,0:19:54.17:0,54,737	0/0:10,0:10:21.04:0,21,293	0/0:50,0:50:99:0,141,1967	1/1:0,12:12:30.10:479,30,0	1/1:0,8:8:21.07:334,21,0	1/1:0,23:23:60.68:959,61,0	0/0:15,0:15:45.15:0,45,628	0/0:25,0:25:68.50:0,69,946	0/0:20,0:20:54.18:0,54,735	0/0:3,0:3:9.03:0,9,126
chr10	94474370	.	CA	C	7252.45	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.879;DP=487;FS=8.829;HRun=1;HaplotypeScore=94.4807;InbreedingCoeff=0.9989;MQ=63.34;MQ0=2;MQRankSum=1.652;QD=39.42;ReadPosRankSum=2.498;VQSLOD=4.9564;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,48:48:99:1969,141,0	0/0:10,0:10:30.09:0,30,454	0/0:24,0:18:42.41:0,42,731	0/0:11,0:10:30.10:0,30,448	0/0:20,0:20:60.17:0,60,911	1/1:0,20:20:54.18:754,54,0	1/1:0,15:15:45.15:629,45,0	0/0:22,0:22:66.21:0,66,1013	0/0:17,0:17:48.16:0,48,767	0/0:15,0:15:45.15:0,45,718	0/0:11,0:11:33.10:0,33,504	1/1:0,12:12:30.10:419,30,0	1/1:0,16:16:45.15:629,45,0	1/1:0,11:11:33.11:461,33,0	0/0:15,0:15:45.15:0,45,717	0/0:11,0:11:33.11:0,33,528	1/1:0,26:26:75.25:1049,75,0	0/0:10,0:10:27.09:0,27,431	0/0:18,0:17:51.17:0,51,788	0/0:17,0:17:48.15:0,48,740	0/0:32,0:32:96.33:0,96,1527	1/1:0,9:9:27.09:377,27,0	1/1:0,14:14:39.13:545,39,0	1/1:0,13:13:30.10:420,30,0	0/0:25,0:25:72.25:0,72,1150	0/0:16,0:16:48.16:0,48,746	0/0:21,0:21:63.14:0,63,930	0/0:8,0:8:24.06:0,24,359
chr10	94474987	.	G	GAAAAAATTTAAA	8597.07	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=0.434;DP=440;FS=3.823;HRun=0;HaplotypeScore=146.0537;InbreedingCoeff=0.9537;MQ=72.21;MQ0=0;MQRankSum=-9.683;QD=93.45;ReadPosRankSum=0.475;VQSLOD=4.8994;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,4:13:24.08:1054,24,0	0/0:9,0:9:24.08:0,24,835	0/0:17,0:15:14.57:0,15,449	0/0:12,0:10:17.99:0,18,442	0/0:34,0:33:81.26:0,81,2579	1/1:7,5:11:30.10:1206,30,0	1/1:4,1:5:12.04:366,12,0	0/0:29,0:29:63.15:0,63,1434	0/0:24,0:24:66.22:0,66,2138	0/0:21,0:20:54.19:0,54,1842	0/0:22,0:22:60.20:0,60,1933	1/1:1,7:8:24.08:1297,24,0	1/1:4,3:7:18.06:707,18,0	1/1:6,4:10:24.08:1050,24,0	0/0:15,0:15:33.10:0,33,990	0/0:10,0:10:30.10:0,30,993	1/1:11,5:16:33.11:1351,33,0	0/0:16,0:16:39.10:0,39,1240	0/0:14,0:14:36.11:0,36,1063	0/0:29,0:29:81.28:0,81,2564	0/0:15,0:15:39.09:0,39,1117	1/1:1,4:6:9.03:397,9,0	1/1:7,5:11:27.08:1114,27,0	1/1:3,0:3:3.01:55,3,0	0/0:18,0:18:42.06:0,42,1226	0/0:19,0:19:48.16:0,48,1708	0/0:27,0:27:66.18:0,66,1929	0/0:17,0:17:39.08:0,39,1091
chr10	94475029	.	G	GA	2159.72	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=3.710;DP=380;FS=8.468;HRun=8;HaplotypeScore=54.3270;InbreedingCoeff=0.9194;MQ=64.73;MQ0=0;MQRankSum=-2.492;QD=26.02;ReadPosRankSum=-1.380;VQSLOD=3.6952;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:15:41.91:449,42,0	0/0:8,0:8:24.01:0,24,220	0/0:7,0:6:13.82:0,14,111	0/0:7,1:7:9.64:0,10,133	0/0:29,0:29:78.02:0,78,706	1/1:1,10:10:27.08:312,27,0	1/1:1,7:8:21.06:242,21,0	0/0:27,0:27:56.96:0,57,506	0/0:13,0:13:27.01:0,27,247	0/0:22,0:22:45.01:0,45,411	0/0:21,0:21:63.03:0,63,577	1/1:0,6:6:18.05:207,18,0	1/1:1,3:4:9.03:104,9,0	1/1:1,4:5:11.97:122,12,0	0/0:12,0:12:27.01:0,27,247	0/0:8,0:8:24.01:0,24,219	1/1:3,15:18:23.73:526,24,0	0/0:15,0:14:39:0,39,357	0/0:15,0:15:32.99:0,33,298	0/0:28,0:28:84.05:0,84,769	0/0:14,0:14:42:0,42,379	1/1:3,0:3:3:25,3,0	1/1:1,11:12:30.09:346,30,0	1/1:0,1:1:3.01:35,3,0	0/0:13,0:13:30.01:0,30,275	0/0:17,0:17:51.02:0,51,463	0/0:21,0:21:63.02:0,63,571	0/0:19,0:19:50.97:0,51,453
chr10	94475188	.	AAAAAAAAACAAAAAACAAAACAAACAAAC	A	2561.24	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=4.771;DP=360;FS=39.712;HRun=0;HaplotypeScore=201.3711;InbreedingCoeff=0.6717;MQ=40.26;MQ0=22;MQRankSum=-5.493;QD=35.09;ReadPosRankSum=3.476;VQSLOD=1.4997;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:12:10.02:0,10,225	0/1:4,0:3:0:0,0,0	0/0:26,0:3:5.69:0,6,278	0/0:19,0:2:5.97:0,6,241	0/0:23,0:20:24.02:0,24,1963	1/1:10,3:13:32.88:1001,33,0	1/1:6,0:4:8.94:78,9,0	0/0:27,0:19:19.77:0,20,1447	0/0:8,0:8:6.60:0,7,998	0/0:14,0:7:6.05:0,6,290	0/0:22,0:17:18.58:0,19,3057	1/1:2,0:2:5.98:55,6,0	1/1:7,2:9:20.95:728,21,0	1/1:4,0:3:5.93:40,6,0	0/0:10,0:8:5.15:0,5,509	0/1:8,0:8:2.39:2,0,1208	0/1:7,0:6:11.74:12,0,22	0/0:11,0:10:18:0,18,1121	0/0:14,0:11:23.96:0,24,2497	0/0:23,0:23:62.78:0,63,5481	0/0:13,0:13:33.03:0,33,2942	1/1:8,1:9:20.72:338,21,0	1/1:9,0:8:8.19:274,8,0	1/1:1,1:2:3.01:216,3,0	0/0:16,0:12:30.39:0,30,2321	0/0:19,0:19:48.10:0,48,4182	0/0:17,0:17:48.11:0,48,4234	0/0:10,0:9:14.95:0,15,1378
chr10	94475196	.	A	AAAAAAAAAAAC	7952.83	PASS	AB=1.000;AC=32;AF=0.593;AN=54;BaseQRankSum=3.863;DP=381;FS=7.502;HRun=0;HaplotypeScore=131.3881;InbreedingCoeff=0.4021;MQ=39.32;MQ0=19;MQRankSum=-8.899;QD=34.58;ReadPosRankSum=-1.761;VQSLOD=3.7715;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:12:99:158,0,107	./.	0/0:29,0:4:5.29:0,5,136	0/0:20,0:2:5.93:0,6,98	1/1:5,1:24:25.60:816,26,0	0/1:11,0:12:95.71:96,0,192	1/1:4,0:3:8.83:74,9,0	0/1:23,0:18:66.24:337,0,66	1/1:1,0:11:11.99:480,12,0	1/1:6,0:19:36.20:1269,36,0	1/1:23,0:18:45.73:1415,46,0	1/1:2,0:2:5.57:31,6,0	0/1:8,0:9:84.53:85,0,175	1/1:1,0:2:5.95:42,6,0	1/1:1,0:8:9.03:384,9,0	1/1:9,0:9:20.89:707,21,0	1/1:5,0:4:8.65:61,9,0	0/1:13,0:12:99:208,0,132	0/0:15,0:13:38.96:0,39,623	0/0:25,0:25:69.01:0,69,1471	0/0:11,0:11:33.07:0,33,718	1/1:8,0:8:4.81:107,5,0	0/1:5,0:6:13.18:13,0,35	0/0:1,0:2:3.01:0,3,62	1/1:10,0:12:32.98:1128,33,0	0/0:21,0:21:51.12:0,51,879	0/0:19,0:19:53.52:0,54,717	1/1:6,0:5:14.79:542,15,0
chr10	94475202	.	AAC	A	261.83	PASS	AB=0.943;AC=17;AF=0.304;AN=56;BaseQRankSum=6.355;DP=379;FS=1.576;HRun=0;HaplotypeScore=79.4644;InbreedingCoeff=0.2596;MQ=41.81;MQ0=19;MQRankSum=-6.341;QD=2.05;ReadPosRankSum=-0.969;VQSLOD=1.8129;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:12:60.98:61,0,85	0/0:7,0:6:6.02:0,6,96	0/0:32,0:4:5.78:0,6,90	0/0:21,1:3:8.92:0,9,99	0/0:25,0:22:23.77:0,24,348	1/1:8,0:8:3.01:49,3,0	0/0:4,0:3:2.59:0,3,10	0/1:26,0:19:18.49:18,0,277	0/0:8,0:8:9.03:0,9,120	0/0:27,0:21:18.21:0,18,573	0/1:18,5:18:58.20:58,0,537	0/0:2,0:2:2.68:0,3,13	1/1:9,0:9:1.75:35,2,0	0/1:2,0:1:0:0,0,0	0/0:10,0:8:9.01:0,9,98	0/1:7,1:8:14.60:15,0,278	1/1:10,0:8:13.62:90,14,0	0/0:12,1:12:19.66:0,20,277	0/0:18,0:16:48.07:0,48,748	0/0:26,0:26:74.93:0,75,1163	0/0:11,0:11:33.11:0,33,567	0/1:7,0:7:3.31:11,0,3	1/1:4,0:4:2.88:15,3,0	1/1:2,0:2:2.88:15,3,0	0/1:14,2:12:48.51:49,0,290	0/0:20,0:20:60.19:0,60,983	0/0:18,0:18:53.37:0,53,756	0/0:7,0:5:13.56:0,14,114
chr10	94475294	.	GAAAATACATAGTT	G	1920.13	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.879;DP=494;FS=5.752;HRun=0;HaplotypeScore=193.3083;InbreedingCoeff=0.9783;MQ=86.16;MQ0=0;MQRankSum=-4.397;QD=73.85;ReadPosRankSum=-2.321;VQSLOD=2.6753;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.26:0,75,4647	0/0:11,0:11:30.07:0,30,1632	0/0:18,0:18:51.17:0,51,2406	0/0:18,0:18:51.11:0,51,2007	0/0:24,0:24:72.23:0,72,4569	0/0:18,0:18:45.15:0,45,2649	0/0:10,0:10:27.09:0,27,1693	1/1:2,18:20:48.13:1439,48,0	0/0:12,0:12:36.12:0,36,2293	0/0:34,0:34:87.30:0,87,5339	0/0:20,0:20:60.20:0,60,3319	0/0:6,0:6:18.06:0,18,1081	0/0:11,0:11:33.11:0,33,2027	0/0:20,0:20:60.21:0,60,3671	0/0:23,0:21:60.21:0,60,3934	0/0:13,0:13:36.12:0,36,2354	0/0:33,0:33:87.28:0,87,5331	0/0:17,0:17:48.14:0,48,2880	0/0:15,0:15:39.13:0,39,2492	0/0:25,0:25:72.23:0,72,4445	0/0:16,0:16:48.16:0,48,3013	0/0:19,0:19:54.06:0,54,3027	0/0:11,0:11:33.07:0,33,1856	0/0:5,0:5:15.05:0,15,988	0/0:11,0:11:33.11:0,33,2178	0/0:23,0:23:66.23:0,66,4190	0/0:27,0:26:81.28:0,81,5154	1/1:1,5:6:15.05:599,15,0
chr10	94476061	.	GACACACAC	G	1159.18	PASS	AB=0.901;AC=33;AF=0.660;AN=50;BaseQRankSum=-1.657;DP=499;FS=0.000;HRun=0;HaplotypeScore=191.8123;InbreedingCoeff=0.1681;MQ=48.41;MQ0=18;MQRankSum=-0.136;QD=3.61;ReadPosRankSum=2.986;VQSLOD=1.8714;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:24:3.82:75,4,0	1/1:8,4:12:2.99:51,3,0	0/0:28,0:13:2.98:0,3,21	./.	1/1:20,2:22:3:26,3,0	./.	1/1:16,0:17:0.47:1,0,0	1/1:29,0:28:3:28,3,0	./.	0/1:20,2:22:99:207,0,293	1/1:17,3:20:3:26,3,0	0/1:10,0:12:0.66:63,0,1	1/1:10,0:14:6.02:112,6,0	1/1:12,0:15:2.71:56,3,0	1/1:14,7:21:8.97:121,9,0	1/1:10,2:14:9.02:173,9,0	1/1:6,0:7:1.82:5,2,0	1/1:8,0:8:7.76:46,8,0	0/1:9,0:9:4.12:4,0,34	0/0:16,0:26:6.01:0,6,70	0/0:10,0:10:1.55:0,2,23	0/0:18,0:19:2.47:0,2,10	0/1:18,0:21:4.32:16,0,4	0/0:17,0:21:0.47:0,0,1	1/1:18,1:19:2.17:25,2,0	0/1:15,0:18:31.22:222,0,31	1/1:12,0:16:5.80:32,6,0	0/0:7,0:7:3.01:0,3,64
chr10	94476101	.	T	TAC	732.82	PASS	AB=0.957;AC=19;AF=0.339;AN=56;BaseQRankSum=7.202;DP=752;FS=8.666;HRun=0;HaplotypeScore=302.0128;InbreedingCoeff=0.2436;MQ=32.20;MQ0=12;MQRankSum=-3.503;QD=1.79;ReadPosRankSum=-0.625;VQSLOD=1.0086;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,1:23:27.67:28,0,67	1/1:21,2:23:17.59:194,18,0	0/0:26,0:10:23.36:0,23,340	0/0:20,0:8:20.80:0,21,283	0/0:34,3:35:3:0,3,42	0/0:25,0:25:7.29:0,7,79	0/1:10,0:10:0:0,0,0	0/0:32,0:28:77.54:0,78,767	0/0:29,0:29:2.70:0,3,37	0/1:59,5:63:99:420,0,635	0/1:29,4:33:25.42:25,0,75	0/0:22,0:22:5.86:0,6,72	0/1:21,0:22:14.42:14,0,183	0/0:17,0:17:2.82:0,3,39	0/0:31,0:31:4.69:0,5,77	0/0:21,0:21:10.21:0,10,143	0/0:10,0:10:10.30:0,10,73	0/0:8,0:8:3.72:0,4,175	0/0:21,0:20:37.08:0,37,479	1/1:40,3:42:2.84:35,3,0	0/0:9,0:7:6.02:0,6,82	1/1:38,6:44:2.04:8,2,0	1/1:32,5:37:3.38:34,3,0	0/1:17,1:18:0.09:0,0,0	1/1:37,4:41:3.49:32,3,0	0/1:39,1:38:41.25:41,0,768	0/0:35,0:35:28.79:0,29,344	1/1:3,7:10:3.48:53,3,0
chr10	94476105	.	T	TACACAC	2041.92	PASS	AB=0.991;AC=23;AF=0.411;AN=56;BaseQRankSum=8.053;DP=749;FS=7.083;HRun=0;HaplotypeScore=321.7658;InbreedingCoeff=0.2086;MQ=32.00;MQ0=11;MQRankSum=-2.385;QD=4.28;ReadPosRankSum=-2.253;VQSLOD=1.0328;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:24:57.79:58,0,99	1/1:23,0:23:21.66:391,22,0	0/0:25,0:10:30.07:0,30,580	0/0:20,0:8:20.87:0,21,487	0/0:38,0:36:6.36:0,6,97	0/0:24,1:25:10.83:0,11,175	1/1:10,0:10:4.67:23,5,0	0/0:34,0:29:78.18:0,78,1335	0/1:27,0:27:12.63:13,0,52	0/1:65,0:64:99:993,0,1204	0/1:31,0:31:61.30:61,0,138	0/0:22,0:22:5.93:0,6,144	0/1:20,2:22:54.94:55,0,314	0/0:17,0:17:1.45:0,1,47	0/0:31,0:31:11.61:0,12,142	0/0:20,0:20:6.58:0,7,278	0/0:10,0:10:9.01:0,9,121	0/1:8,0:8:3.78:4,0,336	0/0:21,0:20:26.34:0,26,816	1/1:41,0:40:4.78:75,5,0	0/0:9,0:7:11.89:0,12,182	1/1:44,0:44:13.43:42,13,0	1/1:36,1:37:0.80:65,1,0	1/1:18,0:18:1.10:2,1,0	0/1:41,0:41:1.19:65,0,1	0/1:41,0:39:99:234,0,1357	0/1:35,0:35:1.68:2,0,603	1/1:9,0:9:8.98:128,9,0
chr10	94476138	.	A	AC	156.04	PASS	AB=0.550;AC=38;AF=0.792;AN=48;BaseQRankSum=0.684;DP=222;FS=0.000;HRun=0;HaplotypeScore=135.3018;InbreedingCoeff=0.2751;MQ=30.36;MQ0=0;MQRankSum=1.714;QD=0.85;ReadPosRankSum=-7.234;VQSLOD=-0.0623;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:5.80:32,6,0	1/1:0,5:5:6.42:22,6,0	1/1:4,0:1:2.98:22,3,0	./.	./.	1/1:0,9:9:4.96:12,5,0	1/1:1,3:4:0.47:1,0,0	0/1:2,6:8:3.08:3,0,61	1/1:1,9:10:3.30:7,3,0	0/1:3,18:21:37.51:38,0,114	1/1:2,8:10:4.41:29,4,0	1/1:0,9:9:3.30:8,3,0	0/0:2,6:8:4.96:0,5,33	1/1:0,6:6:0.40:1,0,0	1/1:1,4:5:0.29:1,0,0	1/1:2,5:7:8.21:54,8,0	./.	0/0:0,2:2:5.72:0,6,29	0/1:1,8:9:7.19:7,0,52	1/1:1,14:16:2.66:7,3,0	1/1:0,2:2:1.25:3,1,0	1/1:1,9:15:1.41:4,1,0	1/1:0,7:9:0.75:2,1,0	1/1:0,4:5:0.94:3,1,0	1/1:0,10:10:6.57:21,7,0	0/1:2,7:9:1.31:1,0,89	0/0:0,11:11:11.36:0,11,64	./.
chr10	94478578	.	C	CTTTTTTTT	8954.62	PASS	AB=1.000;AC=52;AF=0.929;AN=56;BaseQRankSum=-1.915;DP=414;FS=6.049;HRun=10;HaplotypeScore=103.4092;InbreedingCoeff=0.3683;MQ=55.09;MQ0=5;MQRankSum=-1.451;QD=22.00;ReadPosRankSum=-0.156;VQSLOD=1.2872;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:6:8.94:82,9,0	1/1:6,0:6:6.02:101,6,0	0/1:14,0:10:9.75:10,0,152	0/0:7,0:4:8.22:0,8,114	1/1:5,0:23:12.88:222,13,0	1/1:4,0:19:3.01:115,3,0	1/1:16,0:15:27:541,27,0	1/1:32,0:29:60.12:1026,60,0	1/1:15,0:14:24.08:444,24,0	1/1:4,8:20:32.69:702,33,0	1/1:17,0:17:36.08:658,36,0	1/1:8,0:7:12.04:274,12,0	1/1:7,0:7:9.01:199,9,0	1/1:9,0:9:18.04:313,18,0	1/1:2,14:24:8.82:206,9,0	1/1:1,8:12:6.49:124,6,0	1/1:12,0:9:23.92:235,24,0	1/1:10,0:9:9.03:173,9,0	1/1:16,0:12:27.04:461,27,0	1/1:19,0:17:39:489,39,0	1/1:5,0:3:3.01:41,3,0	1/1:10,0:11:24.04:471,24,0	1/1:13,0:13:9.03:172,9,0	0/1:11,0:9:0:0,0,0	1/1:2,1:16:18.04:523,18,0	1/1:24,0:21:51.12:875,51,0	1/1:18,0:15:18.01:306,18,0	1/1:3,3:16:6.02:192,6,0
chr10	94479258	.	A	AAGGATATCTCC	1585.01	PASS	AB=0.804;AC=36;AF=0.947;AN=38;BaseQRankSum=-2.906;DP=38;FS=2.560;HRun=0;HaplotypeScore=17.8054;InbreedingCoeff=-0.2178;MQ=146.27;MQ0=0;MQRankSum=-2.958;QD=45.29;ReadPosRankSum=-1.505;VQSLOD=2.6743;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:4,0:6:32.52:290,0,33	0/1:5,1:6:51.94:176,0,52	1/1:1,0:1:3.01:58,3,0	1/1:1,0:1:3.01:58,3,0	1/1:1,0:1:2.98:21,3,0	1/1:1,0:1:3.01:49,3,0	1/1:2,0:2:5.98:70,6,0	1/1:2,0:2:6.02:191,6,0	1/1:1,0:1:2.97:20,3,0	./.	./.	1/1:1,0:1:2.97:20,3,0	1/1:1,0:1:2.97:20,3,0	1/1:1,0:1:3.01:60,3,0	1/1:2,0:2:2.97:20,3,0	./.	1/1:1,0:1:3.01:52,3,0	1/1:1,0:1:3:25,3,0	./.	1/1:0,0:1:3.01:61,3,0	./.	./.	1/1:2,0:2:6.02:184,6,0	1/1:3,0:3:9.03:279,9,0	./.	1/1:1,0:1:2.99:24,3,0
chr10	94484268	.	GGAAAGAAA	G	4896.52	PASS	AB=0.870;AC=33;AF=0.635;AN=52;BaseQRankSum=-0.689;DP=555;FS=0.000;HRun=0;HaplotypeScore=141.0696;InbreedingCoeff=0.6019;MQ=55.16;MQ0=5;MQRankSum=-5.299;QD=15.30;ReadPosRankSum=1.177;VQSLOD=4.0006;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:21.07:0,21,716	1/1:4,0:4:6.02:142,6,0	./.	./.	1/1:16,16:32:36.04:699,36,0	1/1:8,0:19:9.03:168,9,0	0/1:15,0:15:27.90:28,0,33	0/0:26,0:26:0:0,0,0	1/1:10,14:24:15.05:371,15,0	1/1:8,15:23:45:730,45,0	1/1:11,12:23:24.01:537,24,0	1/1:5,0:13:15.05:279,15,0	1/1:9,0:20:12.04:223,12,0	1/1:5,0:16:18.06:335,18,0	1/1:5,5:10:6.02:149,6,0	1/1:5,6:11:9.03:223,9,0	0/0:16,0:30:23.82:0,24,181	1/1:13,0:13:2.69:50,3,0	0/0:15,0:15:18.05:0,18,335	0/0:15,0:34:52.84:0,53,1116	0/0:1,0:6:6.02:0,6,201	1/1:12,0:24:11.23:204,11,0	1/1:8,0:18:11.07:174,11,0	0/1:5,0:14:7.39:27,0,7	1/1:17,17:34:21.07:517,21,0	0/0:11,0:24:45.70:0,46,1141	0/0:15,0:30:9.03:0,9,232	0/1:7,0:7:27:39,0,27
chr10	94484313	.	G	GAAAGA	956.87	PASS	AB=0.984;AC=9;AF=0.161;AN=56;BaseQRankSum=1.111;DP=581;FS=6.318;HRun=0;HaplotypeScore=143.0026;InbreedingCoeff=0.0630;MQ=65.89;MQ0=11;MQRankSum=2.730;QD=4.23;ReadPosRankSum=0.391;VQSLOD=2.2191;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:23:15.05:438,15,0	0/0:9,0:9:26.97:0,27,295	0/1:34,0:16:14.28:14,0,175	0/1:28,0:13:29.18:29,0,107	0/0:28,0:27:62.62:0,63,686	0/0:18,0:18:30.09:0,30,367	0/0:10,0:10:14.95:0,15,179	0/0:24,0:22:51.06:0,51,493	0/0:23,0:23:42.04:0,42,498	0/0:23,0:22:53.17:0,53,595	0/0:17,0:17:35.64:0,36,355	0/0:9,0:9:18.06:0,18,238	0/0:14,0:14:21.07:0,21,265	0/0:14,0:14:27.09:0,27,346	0/0:12,0:12:27.08:0,27,336	0/0:9,0:9:18.06:0,18,228	0/0:26,0:26:45.56:0,46,571	0/0:12,0:11:14.32:0,14,179	0/1:28,0:25:29.80:30,0,382	0/1:41,0:41:99:268,0,612	0/1:7,0:7:55.40:55,0,60	0/0:23,0:23:48.14:0,48,581	0/0:17,0:17:36.08:0,36,430	0/0:19,0:19:26.52:0,27,295	0/0:29,0:29:54.09:0,54,644	0/1:31,0:29:99:208,0,472	0/1:29,0:29:59.55:60,0,422	0/0:16,0:19:57.08:0,57,572
chr10	94484317	.	GA	G	1136.73	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=-0.772;DP=599;FS=6.529;HRun=4;HaplotypeScore=109.8720;InbreedingCoeff=0.5910;MQ=70.09;MQ0=10;MQRankSum=0.492;QD=9.63;ReadPosRankSum=-1.969;VQSLOD=0.2977;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:20.80:0,21,179	0/0:10,0:10:30.09:0,30,383	0/0:38,0:18:40.29:0,40,476	0/0:36,0:18:33.31:0,33,329	0/0:29,0:28:59.89:0,60,626	0/0:18,0:18:25.73:0,26,297	0/0:10,0:10:12.30:0,12,213	1/1:7,19:24:38.49:623,38,0	0/0:23,0:23:36.17:0,36,391	0/0:27,0:26:71.83:0,72,778	0/0:18,0:18:33.79:0,34,306	0/0:9,0:9:10.78:0,11,60	0/0:14,0:14:15.25:0,15,138	0/0:14,0:14:18.05:0,18,144	0/0:12,0:12:24.70:0,25,295	0/0:9,0:9:14.48:0,14,136	0/0:27,0:27:34.88:0,35,429	0/0:12,0:11:26.74:0,27,350	0/0:27,0:25:59.67:0,60,766	0/1:42,0:42:26.34:26,0,1114	0/0:8,0:8:14.93:0,15,146	0/0:24,0:24:43.72:0,44,523	0/0:18,0:18:34.75:0,35,405	0/0:17,1:19:16.61:0,17,295	0/0:31,0:31:55.37:0,55,579	0/1:31,0:29:32.74:33,0,726	0/0:25,0:25:45.08:0,45,573	1/1:3,16:19:56.33:591,56,0
chr10	94487829	.	AG	A	6647.60	PASS	AB=0.844;AC=50;AF=0.893;AN=56;BaseQRankSum=-7.467;DP=432;FS=7.483;HRun=10;HaplotypeScore=54.0464;InbreedingCoeff=0.3155;MQ=76.54;MQ0=0;MQRankSum=-0.488;QD=16.62;ReadPosRankSum=2.169;VQSLOD=5.0380;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:26,3:29:15.07:15,0,507	1/1:1,9:10:26.99:234,27,0	0/1:14,2:16:19.43:19,0,234	0/1:13,0:11:9.49:9,0,96	1/1:6,17:23:17.81:383,18,0	1/1:2,19:21:50.99:443,51,0	1/1:1,17:18:44.99:391,45,0	1/1:11,12:23:32.95:286,33,0	1/1:2,11:13:29.98:260,30,0	1/1:5,9:14:23.98:208,24,0	1/1:3,9:12:26.99:234,27,0	1/1:1,16:17:41.99:365,42,0	1/1:0,7:7:18:156,18,0	0/1:4,11:15:3.06:204,0,3	1/1:3,7:10:20.98:182,21,0	1/1:2,8:10:23.99:208,24,0	0/0:13,0:32:63.12:0,63,350	1/1:1,16:17:38.99:339,39,0	1/1:3,10:13:29.97:256,30,0	1/1:1,10:11:29.99:260,30,0	1/1:0,14:15:44.03:371,44,0	1/1:2,14:16:32.99:286,33,0	1/1:3,8:11:17.99:156,18,0	1/1:1,15:16:38.99:339,39,0	1/1:0,10:10:24:208,24,0	1/1:2,11:13:32.99:286,33,0	1/1:1,15:16:41.99:365,42,0	1/1:2,8:10:20.99:182,21,0
chr10	94487904	.	CACG	C	2751.12	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.533;DP=504;FS=9.074;HRun=0;HaplotypeScore=79.0420;InbreedingCoeff=0.9878;MQ=76.48;MQ0=0;MQRankSum=-1.863;QD=41.06;ReadPosRankSum=3.244;VQSLOD=4.4899;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:39:99:1649,99,0	0/0:9,0:9:24.08:0,24,543	0/0:11,0:11:27.07:0,27,558	0/0:19,0:19:36.12:0,36,711	0/0:27,0:27:81.28:0,81,1825	0/0:10,0:10:24.08:0,24,502	0/0:24,0:24:66.23:0,66,1435	0/0:17,0:17:45.14:0,45,640	0/0:16,0:16:45.15:0,45,1018	0/0:20,0:20:60.21:0,60,1343	0/0:16,0:16:42.14:0,42,947	0/0:14,0:14:39.11:0,39,817	0/0:10,0:10:24.08:0,24,540	0/0:16,0:16:48.16:0,48,1060	0/0:12,0:12:36.12:0,36,816	0/0:17,0:17:51.18:0,51,1155	1/1:1,27:28:75.24:1224,75,0	0/0:19,0:19:48.14:0,48,1027	0/0:22,0:22:63.22:0,63,1422	0/0:12,0:12:30.10:0,30,654	0/0:27,0:27:72.25:0,72,1626	0/0:21,0:21:57.20:0,57,1289	0/0:8,0:8:15.05:0,15,340	0/0:21,0:21:60.21:0,60,1358	0/0:20,0:20:45.15:0,45,1018	0/0:17,0:17:51.16:0,51,1101	0/0:19,0:19:51.17:0,51,1130	0/0:13,0:13:39.13:0,39,601
chr10	94490046	.	A	ATTTGT	1851.99	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.418;DP=746;FS=0.000;HRun=0;HaplotypeScore=153.7554;InbreedingCoeff=0.9952;MQ=72.80;MQ0=0;MQRankSum=-1.512;QD=56.12;ReadPosRankSum=2.369;VQSLOD=4.1080;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,23:33:70.95:1947,71,0	0/0:11,0:11:27.08:0,27,484	0/0:26,0:26:34.05:0,34,569	0/0:21,0:18:23.28:0,23,291	0/0:44,0:44:99:0,120,2251	0/0:30,0:30:74.58:0,75,560	0/0:28,0:28:59.68:0,60,450	0/0:29,0:29:57.18:0,57,433	0/0:30,0:30:81.28:0,81,1527	0/0:33,0:33:90.26:0,90,1619	0/0:24,0:24:57.19:0,57,1051	0/0:23,0:23:47.73:0,48,356	0/0:23,0:23:53.71:0,54,406	0/0:30,0:30:40.03:0,40,404	0/0:25,0:25:60.18:0,60,1063	0/0:21,0:21:45.14:0,45,809	0/0:32,0:32:78.27:0,78,1486	0/0:14,0:14:39.13:0,39,743	0/0:26,0:26:50.89:0,51,863	0/0:28,0:28:72.21:0,72,1277	0/0:29,0:29:57.18:0,57,1017	0/0:31,0:31:77.60:0,78,592	0/0:31,0:31:56.69:0,57,425	0/0:24,0:24:56.68:0,57,425	0/0:21,0:21:54.17:0,54,968	0/0:40,0:40:99:0,99,1777	0/0:26,0:25:66.21:0,66,1217	0/0:12,0:12:26.87:0,27,235
chr10	94490060	.	G	GT	7440.73	PASS	AB=0.765;AC=20;AF=0.357;AN=56;BaseQRankSum=-13.217;DP=744;FS=0.000;HRun=8;HaplotypeScore=73.1134;InbreedingCoeff=0.8827;MQ=67.98;MQ0=0;MQRankSum=1.666;QD=26.20;ReadPosRankSum=1.507;VQSLOD=5.4944;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:99:136,0,116	0/0:13,0:13:33.02:0,33,302	0/0:23,0:21:41.96:0,42,374	0/0:23,0:19:28.77:0,29,240	0/0:47,0:47:99:0,129,1180	1/1:1,28:29:78.23:900,78,0	1/1:1,25:26:63.19:727,63,0	1/1:2,25:27:75.19:835,75,0	0/0:33,0:33:93.02:0,93,845	0/0:35,0:35:96.04:0,96,878	0/0:25,0:25:57.07:0,57,588	1/1:3,21:24:57.17:658,57,0	1/1:3,19:22:57.17:658,57,0	1/1:4,24:28:66.20:762,66,0	0/0:23,0:23:66.02:0,66,599	0/0:22,0:22:59.99:0,60,541	0/0:30,0:30:87.03:0,87,791	0/0:17,0:17:51.03:0,51,467	0/0:29,0:29:69.02:0,69,628	0/0:25,0:25:63.01:0,63,570	0/0:26,0:26:63.02:0,63,576	1/1:4,31:35:90.27:1035,90,0	1/1:3,24:28:68.97:789,69,0	1/1:1,22:23:60.18:692,60,0	0/0:25,0:25:59.94:0,60,539	0/0:37,0:37:99:0,102,921	0/0:27,0:26:78.02:0,78,708	0/1:1,8:9:0.39:250,0,0
chr10	94490723	.	T	TC	4480.12	PASS	AB=0.606;AC=35;AF=0.625;AN=56;BaseQRankSum=-8.911;DP=431;FS=0.455;HRun=9;HaplotypeScore=48.1195;InbreedingCoeff=0.6010;MQ=82.21;MQ0=0;MQRankSum=-1.640;QD=16.78;ReadPosRankSum=0.394;VQSLOD=4.5689;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,22:29:12.42:326,0,12	1/1:1,5:6:12.03:133,12,0	0/0:20,0:19:40.19:0,40,308	0/0:14,0:14:17.27:0,17,109	1/1:2,7:10:11.61:118,12,0	0/1:6,6:13:6.95:129,0,7	1/1:4,18:22:18.56:415,19,0	1/1:6,8:14:21.02:219,21,0	1/1:3,9:12:1.02:239,1,0	1/1:4,11:15:33.08:359,33,0	1/1:6,5:11:18.05:199,18,0	1/1:4,8:13:18.04:196,18,0	0/1:2,2:4:40.08:54,0,40	1/1:1,6:7:18.05:199,18,0	1/1:3,11:14:18.05:199,18,0	1/1:0,8:8:15.04:166,15,0	0/0:28,0:29:76.97:0,77,649	1/1:3,15:18:36.10:398,36,0	0/0:12,0:12:26.98:0,27,233	0/0:16,1:17:41.96:0,42,361	0/0:27,0:27:62.93:0,63,543	1/1:2,9:11:24.06:264,24,0	1/1:4,8:12:11.72:132,12,0	0/1:8,20:28:6.98:387,0,7	0/1:3,9:12:8:148,0,8	0/0:25,1:26:27.25:0,27,458	0/0:18,0:19:50.02:0,50,423	1/1:1,7:8:18.05:199,18,0
chr10	94491781	.	CT	C	579.33	PASS	AC=16;AF=0.333;AN=48;BaseQRankSum=-0.334;DP=349;FS=12.119;HRun=8;HaplotypeScore=39.3512;InbreedingCoeff=0.7691;MQ=35.86;MQ0=60;MQRankSum=-4.133;QD=6.90;ReadPosRankSum=-1.257;VQSLOD=-0.3205;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:30:15:0,15,165	1/1:1,2:3:3:29,3,0	./.	./.	1/1:5,13:17:18.01:172,18,0	0/0:15,0:15:11.99:0,12,129	0/0:15,0:11:14.91:0,15,160	0/0:14,0:13:21.05:0,21,242	1/1:6,6:9:12:116,12,0	1/1:8,4:8:11.68:115,12,0	1/1:7,6:13:9:86,9,0	0/0:9,0:5:9.03:0,9,109	0/0:5,0:5:12.04:0,12,145	0/0:11,0:11:9.03:0,9,109	1/1:2,4:3:6.01:58,6,0	1/1:5,6:10:15.02:145,15,0	0/0:12,0:10:6.02:0,6,71	./.	0/0:19,0:15:30.02:0,30,332	0/0:10,0:8:21.06:0,21,254	0/0:17,0:16:3.01:0,3,36	0/0:7,0:7:9.03:0,9,109	0/0:9,0:8:9.50:0,9,109	0/0:14,0:12:7.26:0,7,75	1/1:4,4:5:3:29,3,0	0/0:14,0:14:30.09:0,30,362	0/0:22,0:19:24.03:0,24,266	./.
chr10	94491866	.	CT	C	521.20	PASS	AB=0.969;AC=25;AF=0.463;AN=54;BaseQRankSum=-3.954;DP=246;FS=0.000;HRun=12;HaplotypeScore=29.0959;InbreedingCoeff=0.3623;MQ=56.51;MQ0=77;MQRankSum=-0.711;QD=4.61;ReadPosRankSum=0.895;VQSLOD=-0.2671;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:7:14.89:0,15,118	1/1:0,1:1:2.99:23,3,0	0/0:25,0:6:5.80:0,6,41	0/0:13,0:5:0:0,0,0	1/1:7,11:19:17.89:139,18,0	0/1:6,0:4:6.16:6,0,25	./.	0/0:9,0:6:2.97:0,3,20	1/1:3,8:8:17.93:139,18,0	1/1:1,3:4:5.97:46,6,0	1/1:5,4:9:2.96:23,3,0	0/1:6,0:5:0.90:1,0,41	0/0:4,0:3:5.88:0,6,36	0/0:8,0:5:5.96:0,6,48	1/1:0,2:2:5.98:46,6,0	1/1:2,3:3:5.98:46,6,0	1/1:8,0:3:2.74:12,3,0	1/1:1,2:2:2.99:23,3,0	0/1:9,0:4:9.35:9,0,37	0/0:8,1:9:17.72:0,18,115	0/0:9,0:4:2.96:0,3,19	0/0:11,0:9:11.93:0,12,99	0/0:10,0:8:14.94:0,15,130	0/0:6,0:1:2.96:0,3,19	1/1:4,6:4:8.97:69,9,0	0/1:9,2:10:24.61:94,0,25	0/1:9,0:8:6.32:6,0,30	0/0:5,0:2:2.97:0,3,20
chr10	94501084	.	T	TA	362.11	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.989;DP=446;FS=7.751;HRun=10;HaplotypeScore=74.8894;InbreedingCoeff=0.7904;MQ=71.72;MQ0=1;MQRankSum=0.754;QD=19.06;ReadPosRankSum=0.852;VQSLOD=4.4401;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:23.48:455,23,0	0/0:9,0:9:26.97:0,27,221	0/0:20,0:18:38.05:0,38,272	0/0:12,0:13:20.90:0,21,166	0/0:17,0:17:38.92:0,39,319	0/0:24,0:25:47.87:0,48,394	0/0:21,0:21:38.89:0,39,316	0/0:26,1:27:40.11:0,40,530	0/0:17,0:17:47.95:0,48,394	0/0:21,0:21:47.90:0,48,394	0/0:19,0:19:44.92:0,45,369	0/0:6,0:6:14.98:0,15,123	0/0:11,0:12:29.01:0,29,228	0/0:15,0:15:35.94:0,36,295	0/0:10,0:10:20.96:0,21,172	0/0:14,0:16:43.02:0,43,332	0/0:13,1:14:4:0,4,238	0/0:7,0:7:17.97:0,18,148	0/0:12,0:12:29.96:0,30,246	0/0:18,0:18:41.93:0,42,345	0/0:8,0:8:20.96:0,21,172	0/0:27,1:28:30.92:0,31,457	0/0:15,0:15:38.92:0,39,316	0/0:8,0:8:20.96:0,21,172	0/0:17,1:18:9.95:0,10,288	0/0:17,1:18:15.92:0,16,332	0/0:24,0:24:59.90:0,60,492	0/0:7,0:7:20.88:0,21,156
chr10	94502087	.	GCC	G	4728.05	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=5.172;DP=471;FS=2.442;HRun=10;HaplotypeScore=63.7397;InbreedingCoeff=0.9677;MQ=74.08;MQ0=2;MQRankSum=0.139;QD=26.86;ReadPosRankSum=3.244;VQSLOD=5.0294;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:0,0:19:39.93:0,40,137	1/1:1,7:8:15.04:167,15,0	0/0:12,0:10:15.45:0,15,240	0/0:17,0:15:26.98:0,27,325	1/1:1,19:20:51.13:568,51,0	0/0:7,0:18:26.99:0,27,261	0/0:18,0:20:47.13:0,47,684	0/0:19,0:19:21.03:0,21,248	1/1:2,13:15:36.08:401,36,0	1/1:2,17:18:47.99:516,48,0	1/1:0,10:10:24.06:266,24,0	0/0:12,0:13:35.59:0,36,505	0/0:18,0:18:48.16:0,48,741	0/0:17,0:17:39.11:0,39,575	1/1:2,21:22:60.16:669,60,0	1/1:0,21:21:54.15:602,54,0	1/1:1,18:19:42.11:468,42,0	1/1:1,18:19:48.13:535,48,0	0/0:9,0:10:21.07:0,21,314	0/0:19,0:21:38.44:0,38,459	0/0:19,0:20:59.66:0,60,850	0/0:9,0:10:26.57:0,27,367	0/0:16,0:16:36.10:0,36,526	0/0:20,0:20:57.17:0,57,858	1/1:3,19:22:48.11:535,48,0	0/0:26,0:26:71.64:0,72,895	0/0:18,0:18:51.15:0,51,765	0/0:1,0:1:3:0,3,25
chr10	94503195	.	TTGCCTGCC	T	3848.96	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=7.008;DP=487;FS=7.559;HRun=0;HaplotypeScore=106.6159;InbreedingCoeff=0.8794;MQ=58.04;MQ0=5;MQRankSum=-4.514;QD=18.68;ReadPosRankSum=-0.188;VQSLOD=1.9027;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,15:27:9.92:194,10,0	0/0:5,0:5:15.05:0,15,507	0/0:23,0:17:3.05:0,3,183	0/0:22,0:16:11.53:0,12,170	0/0:10,0:10:9.01:0,9,240	1/1:5,11:16:12.04:232,12,0	1/1:12,10:22:3.01:77,3,0	1/1:2,18:20:54.10:815,54,0	0/0:27,0:27:60.21:0,60,1986	0/0:8,0:8:15.05:0,15,441	0/0:9,0:9:21.07:0,21,534	1/1:5,5:10:12.04:308,12,0	1/1:5,12:17:21.07:492,21,0	1/1:1,11:12:15.05:387,15,0	0/0:25,0:25:51.17:0,51,1811	0/0:23,0:23:45.14:0,45,1520	1/1:14,2:16:32.56:494,33,0	0/0:10,0:10:24.06:0,24,661	0/0:16,0:20:27.01:0,27,494	0/0:4,0:11:18.06:0,18,414	0/0:16,0:35:30.09:0,30,858	1/1:1,8:8:9.03:226,9,0	1/1:6,12:17:11.23:166,11,0	1/1:7,13:20:9.03:227,9,0	0/0:17,0:17:33.11:0,33,1349	0/0:6,0:6:12.04:0,12,416	0/0:10,0:25:23.81:0,24,648	1/1:3,16:19:9.03:232,9,0
chr10	94504485	.	ATAT	A	448.07	PASS	AC=6;AF=0.150;AN=40;BaseQRankSum=1.329;DP=131;FS=2.998;HRun=0;HaplotypeScore=41.7913;InbreedingCoeff=0.5560;MQ=78.40;MQ0=1;MQRankSum=-4.210;QD=29.87;ReadPosRankSum=-0.318;VQSLOD=3.4009;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:5:3.01:0,3,67	0/0:2,0:2:6.02:0,6,134	0/0:8,0:6:6.02:0,6,117	0/0:15,0:11:18.06:0,18,324	0/0:3,0:3:3.01:0,3,67	0/0:7,0:7:15.05:0,15,331	./.	0/0:21,0:21:57.19:0,57,1222	0/0:2,0:2:5.95:0,6,85	0/0:4,0:4:12.04:0,12,268	./.	0/0:2,0:2:6.02:0,6,134	0/0:3,0:3:9.03:0,9,201	./.	./.	0/0:3,0:3:9.03:0,9,200	0/0:11,0:11:21.06:0,21,409	0/0:14,0:14:27.09:0,27,603	1/1:1,5:6:15.05:245,15,0	./.	./.	./.	./.	0/0:1,0:1:3.01:0,3,67	0/0:4,0:4:3.01:0,3,67	1/1:1,0:1:3:28,3,0	1/1:0,8:8:18.06:293,18,0	0/0:8,0:8:16.97:0,17,463
chr10	94504503	.	AC	A	1175.89	PASS	AB=0.875;AC=37;AF=0.974;AN=38;BaseQRankSum=-1.586;DP=104;FS=5.441;HRun=1;HaplotypeScore=29.4670;InbreedingCoeff=-0.0437;MQ=77.69;MQ0=0;MQRankSum=1.683;QD=11.42;ReadPosRankSum=1.683;VQSLOD=1.7753;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:3.01:35,3,0	1/1:2,0:2:5.98:47,6,0	1/1:6,0:4:3.37:17,3,0	0/1:5,0:5:8.18:8,0,30	1/1:2,0:2:2.92:17,3,0	1/1:5,0:5:3:25,3,0	./.	1/1:25,0:25:60.99:316,61,0	1/1:1,0:1:2.99:24,3,0	1/1:4,0:4:11.52:62,12,0	./.	1/1:2,0:2:3.81:18,4,0	1/1:2,0:2:5.85:34,6,0	./.	./.	1/1:2,0:2:5.92:41,6,0	1/1:8,0:8:11.86:82,12,0	1/1:9,0:9:20.77:142,21,0	1/1:6,0:6:14.83:110,15,0	./.	./.	./.	./.	1/1:1,0:1:2.92:17,3,0	1/1:3,0:3:2.92:17,3,0	./.	1/1:5,0:5:12.45:103,12,0	1/1:8,0:8:23.52:147,24,0
chr10	94508313	.	A	AG	54.66	PASS	AB=0.789;AC=4;AF=0.087;AN=46;BaseQRankSum=0.872;DP=118;FS=0.000;HRun=1;HaplotypeScore=21.3812;InbreedingCoeff=0.0886;MQ=39.06;MQ0=11;MQRankSum=-2.481;QD=4.20;ReadPosRankSum=-0.170;VQSLOD=-0.0158;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:8:15.05:0,15,187	0/1:3,1:3:32.93:38,0,33	./.	./.	0/0:1,0:1:3.01:0,3,39	0/0:5,0:4:9.03:0,9,117	0/0:6,0:4:9.03:0,9,116	0/0:9,0:7:18.06:0,18,233	./.	0/0:8,0:7:18.02:0,18,213	0/0:4,0:4:9.03:0,9,116	0/0:4,0:4:12.04:0,12,155	0/0:4,0:2:3.01:0,3,39	0/0:2,0:2:6.02:0,6,78	0/0:6,0:6:9.03:0,9,117	0/0:7,0:7:21.07:0,21,272	0/0:4,0:3:9.03:0,9,113	0/0:4,0:4:6.02:0,6,78	0/0:10,0:9:27.09:0,27,348	1/1:1,1:1:3.01:44,3,0	0/0:5,0:5:12.04:0,12,156	0/0:1,1:2:3.01:0,3,39	./.	./.	0/0:4,0:4:6.02:0,6,78	0/1:5,2:6:65.63:70,0,66	0/0:5,0:5:12.04:0,12,155	0/0:2,0:2:6.02:0,6,78
chr10	94508354	.	AAAAG	A	1964.51	PASS	AB=1.000;AC=21;AF=0.404;AN=52;BaseQRankSum=3.146;DP=247;FS=5.091;HRun=0;HaplotypeScore=55.5136;InbreedingCoeff=0.7786;MQ=72.74;MQ0=22;MQRankSum=-6.405;QD=20.25;ReadPosRankSum=-1.819;VQSLOD=2.2922;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,3:10:18.01:286,18,0	0/0:2,0:1:3.01:0,3,76	0/0:32,0:5:11.26:0,11,128	0/1:27,0:12:17.73:18,0,90	0/0:7,0:7:15.05:0,15,356	1/1:3,6:8:23.86:322,24,0	1/1:6,2:7:17.93:220,18,0	1/1:7,9:15:36.05:550,36,0	0/0:7,0:7:12.04:0,12,265	0/0:5,0:5:12.04:0,12,304	0/0:7,0:7:15.03:0,15,295	1/1:1,6:7:18.06:320,18,0	1/1:3,2:4:9:126,9,0	1/1:3,2:5:11.95:146,12,0	0/0:9,0:9:18.06:0,18,416	0/0:4,0:4:12.04:0,12,304	1/1:5,0:4:10.50:97,10,0	0/0:14,0:13:30.02:0,30,663	0/0:17,0:16:41.87:0,42,827	0/0:4,0:3:9.03:0,9,227	0/0:8,0:8:15.03:0,15,327	1/1:0,1:1:3.01:53,3,0	./.	./.	0/0:12,0:11:27.02:0,27,507	0/0:13,0:12:36.12:0,36,864	0/0:9,0:9:21.07:0,21,528	1/1:1,0:1:2.98:22,3,0
chr10	94508357	.	A	AAGG	829.83	PASS	AB=1.000;AC=18;AF=0.346;AN=52;BaseQRankSum=6.365;DP=255;FS=0.000;HRun=0;HaplotypeScore=60.7928;InbreedingCoeff=0.6573;MQ=75.46;MQ0=23;MQRankSum=-5.603;QD=8.92;ReadPosRankSum=-0.098;VQSLOD=2.6087;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,3:9:17.87:210,18,0	0/0:3,0:2:6.01:0,6,76	0/0:35,0:6:1.22:0,1,116	0/1:28,0:14:7.76:8,0,143	0/0:7,0:7:15.05:0,15,248	1/1:8,1:8:12.64:165,13,0	1/1:6,1:6:5.50:84,6,0	1/1:15,0:14:24.08:195,24,0	0/0:7,0:7:12.04:0,12,192	0/0:6,0:6:14.99:0,15,204	0/0:7,0:7:15.05:0,15,239	1/1:7,0:7:12.97:131,13,0	1/1:5,0:4:6.02:65,6,0	0/1:5,0:5:11.86:12,0,13	0/0:9,0:9:18.06:0,18,265	0/0:4,0:4:12.04:0,12,204	1/1:3,1:4:8.96:119,9,0	0/0:15,0:14:29.90:0,30,477	0/0:18,0:17:44.84:0,45,696	0/0:4,0:3:9.03:0,9,153	0/0:9,0:9:18.01:0,18,253	1/1:1,0:1:2.98:21,3,0	./.	./.	0/0:12,0:11:27.09:0,27,412	0/0:13,0:12:36.12:0,36,573	0/0:9,0:9:21.07:0,21,349	0/0:1,0:1:2.60:0,3,10
chr10	94508361	.	AAGGG	A	720.44	PASS	AB=0.975;AC=17;AF=0.315;AN=54;BaseQRankSum=4.580;DP=294;FS=4.603;HRun=0;HaplotypeScore=72.7526;InbreedingCoeff=0.4769;MQ=76.22;MQ0=23;MQRankSum=-8.169;QD=8.00;ReadPosRankSum=-2.122;VQSLOD=0.9372;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,3:12:21.53:226,22,0	0/0:3,0:2:6.02:0,6,84	0/0:42,0:10:6.24:0,6,178	0/0:34,0:16:32.70:0,33,434	0/0:9,0:9:19.84:0,20,293	1/1:10,1:10:9.81:128,10,0	1/1:6,1:6:2.74:81,3,0	0/1:19,0:19:34.93:133,0,35	0/0:7,0:7:12.04:0,12,209	0/0:5,0:5:11.81:0,12,260	0/0:8,0:8:20.28:0,20,304	0/1:8,0:8:7.36:72,0,7	1/1:7,0:5:6.07:73,6,0	0/1:6,0:6:1.10:38,0,1	0/0:9,0:9:18.06:0,18,366	0/0:6,0:6:16.48:0,16,236	0/1:6,1:6:22.84:87,0,23	0/0:15,0:14:19.23:0,19,498	0/0:19,0:18:50.03:0,50,785	0/0:5,0:4:11.99:0,12,203	0/0:7,0:7:21.06:0,21,357	1/1:2,0:2:5.10:23,5,0	./.	1/1:5,0:4:4.31:14,4,0	0/0:11,0:10:23.75:0,24,390	0/0:13,0:13:39.13:0,39,703	0/0:11,0:11:24.08:0,24,437	0/1:5,0:5:11.29:15,0,11
chr10	94508365	.	G	GAA	5162.56	PASS	AB=0.522;AC=51;AF=0.911;AN=56;BaseQRankSum=-4.637;DP=308;FS=18.636;HRun=10;HaplotypeScore=55.4091;InbreedingCoeff=0.4807;MQ=76.05;MQ0=15;MQRankSum=-4.063;QD=22.25;ReadPosRankSum=1.702;VQSLOD=2.3040;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:14:21.48:216,21,0	1/1:0,2:2:6.02:90,6,0	0/0:41,0:10:7.37:0,7,71	0/0:35,0:16:31:0,31,237	1/1:1,7:9:20.04:241,20,0	1/1:2,8:10:29.58:397,30,0	1/1:2,6:8:18.06:254,18,0	1/1:4,18:24:56.39:783,56,0	1/1:2,6:8:12.04:179,12,0	1/1:2,1:6:9.01:98,9,0	1/1:0,9:9:24.08:358,24,0	1/1:2,6:8:15.05:221,15,0	1/1:1,3:5:12.04:178,12,0	1/1:2,3:6:11.23:119,11,0	1/1:2,5:7:9.03:128,9,0	1/1:1,4:6:15.04:208,15,0	1/1:4,0:8:18.04:189,18,0	1/1:3,13:15:30.10:448,30,0	1/1:4,0:21:42.84:164,43,0	1/1:2,0:4:4.99:18,5,0	1/1:0,0:7:14.97:53,15,0	1/1:2,1:3:8.97:89,9,0	1/1:2,0:2:2.99:24,3,0	1/1:1,4:4:6.02:90,6,0	1/1:2,9:11:21.07:313,21,0	1/1:1,0:13:2.78:85,3,0	0/1:1,0:12:9.99:41,0,10	1/1:1,4:5:12.04:180,12,0
chr10	94511247	.	AG	A	16866.25	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.957;DP=573;FS=3.434;HRun=3;HaplotypeScore=64.8817;InbreedingCoeff=0.8947;MQ=53.09;MQ0=5;MQRankSum=-1.991;QD=30.61;ReadPosRankSum=3.201;VQSLOD=4.8082;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:96.30:1185,96,0	1/1:2,11:13:36.07:429,36,0	0/0:8,3:5:14.04:0,14,121	0/0:7,4:3:6.02:0,6,69	1/1:0,26:23:57.18:705,57,0	1/1:0,24:23:69.22:855,69,0	1/1:0,10:7:15.05:186,15,0	1/1:5,25:17:39.07:451,39,0	1/1:0,22:22:63.20:780,63,0	1/1:2,11:12:30.09:372,30,0	1/1:0,23:22:51.16:629,51,0	1/1:0,24:24:63.20:781,63,0	1/1:0,15:15:42.13:520,42,0	1/1:0,26:26:75.24:929,75,0	1/1:0,18:18:54.17:669,54,0	1/1:1,27:28:72.23:892,72,0	1/1:2,23:25:63.16:764,63,0	1/1:1,22:23:63.18:767,63,0	1/1:2,18:17:48.14:585,48,0	1/1:0,26:23:54.17:665,54,0	1/1:0,32:31:84.26:1041,84,0	1/1:0,17:17:48.15:592,48,0	1/1:0,8:8:9.03:111,9,0	1/1:0,17:17:42.13:520,42,0	1/1:0,13:12:33.10:409,33,0	1/1:0,29:26:78.23:950,78,0	1/1:1,20:20:57.18:706,57,0	1/1:0,11:11:30.09:372,30,0
chr10	94513587	.	G	GT	8491.48	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-10.734;DP=678;FS=3.763;HRun=6;HaplotypeScore=89.4175;InbreedingCoeff=0.9988;MQ=55.66;MQ0=0;MQRankSum=-0.242;QD=29.18;ReadPosRankSum=0.934;VQSLOD=5.3308;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:31:75.21:927,75,0	0/0:9,0:9:18.04:0,18,184	0/0:18,0:17:31.67:0,32,333	0/0:27,0:25:48.07:0,48,473	0/0:26,0:27:69.06:0,69,686	1/1:4,27:31:63.20:792,63,0	1/1:3,16:19:45.14:566,45,0	1/1:3,18:20:51.15:628,51,0	0/0:24,0:24:57.12:0,57,578	0/0:24,0:24:66.14:0,66,672	0/0:25,0:25:63.03:0,63,640	1/1:1,22:23:54.17:679,54,0	1/1:1,28:29:75.24:943,75,0	1/1:1,19:20:48.15:604,48,0	0/0:25,0:25:54.12:0,54,550	0/0:17,0:17:39.08:0,39,398	1/1:1,18:19:51.16:641,51,0	0/0:22,0:22:42.67:0,43,508	0/0:22,0:22:60.09:0,60,597	0/0:39,0:41:92.31:0,92,1006	0/0:15,0:15:42.09:0,42,428	1/1:1,21:22:54.17:679,54,0	1/1:6,23:30:57.18:712,57,0	1/1:2,21:23:45.14:566,45,0	0/0:29,0:30:63.87:0,64,695	0/0:27,0:27:61.36:0,61,690	0/0:34,0:34:84.18:0,84,854	1/1:1,22:23:60.19:755,60,0
chr10	94513734	.	AT	A	10031.41	PASS	AB=0.700;AC=51;AF=0.981;AN=52;BaseQRankSum=-1.732;DP=338;FS=0.000;HRun=3;HaplotypeScore=84.1551;InbreedingCoeff=-0.0233;MQ=37.70;MQ0=0;MQRankSum=-0.435;QD=30.49;ReadPosRankSum=1.014;VQSLOD=4.4598;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:33.10:389,33,0	1/1:0,7:7:21.06:256,21,0	./.	./.	1/1:3,13:16:36.11:428,36,0	1/1:4,17:21:51.16:616,51,0	1/1:0,6:6:18.06:220,18,0	1/1:1,13:14:33.10:404,33,0	1/1:2,13:15:39.12:480,39,0	1/1:0,18:18:54.17:666,54,0	1/1:2,15:16:39.12:469,39,0	1/1:1,14:15:30.09:371,30,0	1/1:0,18:18:54.17:666,54,0	1/1:0,10:10:27.08:330,27,0	1/1:0,16:16:45.14:553,45,0	1/1:0,10:10:27.08:334,27,0	1/1:1,6:7:15.05:181,15,0	0/1:4,3:7:3.99:63,0,4	1/1:1,8:8:21.07:259,21,0	1/1:3,18:21:54.17:668,54,0	1/1:1,2:3:6.02:74,6,0	1/1:0,12:12:36.11:438,36,0	1/1:1,19:19:42.13:506,42,0	1/1:0,4:4:6.02:74,6,0	1/1:1,10:11:27.08:330,27,0	1/1:0,12:11:33.10:408,33,0	1/1:0,14:14:39.12:476,39,0	1/1:4,10:14:30.09:372,30,0
chr10	94515203	.	CAA	C	825.52	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.001;DP=473;FS=5.813;HRun=2;HaplotypeScore=61.6216;InbreedingCoeff=0.9855;MQ=57.81;MQ0=7;MQRankSum=0.449;QD=39.31;ReadPosRankSum=-2.432;VQSLOD=2.8211;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.11:0,48,932	0/0:9,0:9:27.08:0,27,513	0/0:9,0:8:24.08:0,24,478	0/0:19,0:13:36.12:0,36,670	0/0:20,0:20:60.21:0,60,1216	0/0:20,0:20:60.15:0,60,1164	0/0:21,0:21:63.21:0,63,1225	1/1:0,15:15:42.13:652,42,0	0/0:16,0:16:48.12:0,48,912	0/0:33,0:33:99:0,99,2004	0/0:26,0:26:69.13:0,69,1316	0/0:15,0:15:42.09:0,42,798	0/0:16,0:16:48.11:0,48,932	0/0:14,0:14:42.14:0,42,830	0/0:19,0:19:57.13:0,57,1078	0/0:15,0:15:36.12:0,36,731	0/0:17,0:17:51.17:0,51,1010	0/0:6,0:6:18.03:0,18,325	0/0:18,0:13:39.13:0,39,792	0/0:25,0:25:69.24:0,69,1401	0/0:21,0:21:63.21:0,63,1246	0/0:6,0:6:18.06:0,18,365	0/0:23,0:23:63.10:0,63,1160	0/0:10,0:10:30.10:0,30,609	0/0:20,0:18:51.13:0,51,948	0/0:15,0:15:45.15:0,45,890	0/0:21,0:21:60.21:0,60,1199	1/1:0,6:6:18.06:293,18,0
chr10	94515933	.	GA	G	2978.55	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.214;DP=540;FS=4.837;HRun=8;HaplotypeScore=51.0750;InbreedingCoeff=0.9697;MQ=64.10;MQ0=0;MQRankSum=-0.085;QD=21.12;ReadPosRankSum=2.018;VQSLOD=3.8551;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.26:0,93,1107	0/0:9,0:9:18.06:0,18,217	0/0:11,0:9:12.09:0,12,109	0/0:4,0:3:4.26:0,4,39	0/0:28,0:28:78.23:0,78,932	1/1:2,16:18:42.06:406,42,0	1/1:2,14:16:36.06:348,36,0	0/0:36,0:36:96.29:0,96,1159	0/0:18,0:18:48.12:0,48,556	0/0:30,0:30:81.25:0,81,977	0/0:20,0:20:57.17:0,57,676	1/1:1,18:19:45.07:435,45,0	1/1:0,15:15:42.07:406,42,0	1/1:2,15:17:33.05:319,33,0	0/0:15,0:15:36.11:0,36,435	0/0:14,0:14:42.12:0,42,496	0/0:18,0:18:51.16:0,51,614	0/0:14,0:14:42.13:0,42,506	0/0:14,0:14:30.09:0,30,362	0/0:34,0:34:96.29:0,96,1157	0/0:21,0:21:57.17:0,57,688	1/1:2,20:22:54.08:521,54,0	1/1:2,19:21:50.59:491,51,0	1/1:3,10:13:27.04:261,27,0	0/0:29,0:29:81.25:0,81,978	0/0:19,0:19:57.17:0,57,689	0/0:14,0:14:42.13:0,42,507	0/0:19,0:19:57.17:0,57,689
chr10	94516556	.	CA	C	2293.39	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.483;DP=585;FS=2.294;HRun=2;HaplotypeScore=58.0253;InbreedingCoeff=0.9920;MQ=71.84;MQ0=1;MQRankSum=-0.330;QD=32.76;ReadPosRankSum=2.583;VQSLOD=3.6419;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,45:45:99:1558,120,0	0/0:6,0:6:18.06:0,18,270	0/0:15,0:14:31.88:0,32,499	0/0:20,0:19:46.56:0,47,572	0/0:16,0:16:44.82:0,45,656	0/0:25,0:25:72.24:0,72,1074	0/0:9,0:9:24.08:0,24,360	0/0:25,0:25:72.24:0,72,1062	0/0:26,0:26:75.25:0,75,1124	0/0:30,0:30:87.29:0,87,1299	0/0:10,0:10:30.09:0,30,431	0/0:31,0:31:90.29:0,90,1313	0/0:22,0:22:63.20:0,63,922	0/0:20,0:20:60.20:0,60,899	0/0:24,0:24:63.20:0,63,924	0/0:15,0:15:45.14:0,45,655	1/1:0,25:25:66.21:857,66,0	0/0:24,0:24:69.19:0,69,1009	0/0:29,0:29:84.19:0,84,1215	0/0:18,0:18:54.17:0,54,778	0/0:24,0:24:72.24:0,72,1078	0/0:15,0:15:42.14:0,42,629	0/0:20,0:20:60.20:0,60,899	0/0:22,0:22:63.21:0,63,944	0/0:10,0:10:30.10:0,30,450	0/0:28,0:28:81.27:0,81,1197	0/0:24,0:24:69.23:0,69,1029	0/0:7,0:7:21.07:0,21,315
chr10	94516803	.	TTATATA	T	2469.08	PASS	AB=0.667;AC=22;AF=0.550;AN=40;BaseQRankSum=-0.565;DP=195;FS=0.917;HRun=0;HaplotypeScore=53.0020;InbreedingCoeff=0.5386;MQ=47.19;MQ0=3;MQRankSum=-4.115;QD=20.92;ReadPosRankSum=-1.822;VQSLOD=2.5697;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,6:14:31.74:59,0,32	./.	./.	./.	0/0:5,0:5:3:0,3,25	1/1:4,10:14:36.08:639,36,0	1/1:1,4:5:6.02:129,6,0	1/1:16,7:22:45.11:759,45,0	./.	./.	./.	1/1:4,2:7:9.02:127,9,0	1/1:3,5:8:11.96:211,12,0	1/1:3,6:9:6.02:129,6,0	./.	./.	0/1:8,1:19:23.22:124,0,23	0/0:12,0:14:17.43:0,17,381	0/0:6,0:7:12.04:0,12,154	0/0:1,0:3:9.03:0,9,117	0/0:1,0:1:3.01:0,3,40	1/1:5,2:7:9.01:153,9,0	1/1:0,4:4:3.01:65,3,0	1/1:2,1:3:6.02:114,6,0	0/0:1,0:1:3:0,3,25	0/0:3,0:5:12.04:0,12,152	0/0:8,0:15:30.07:0,30,367	1/1:4,1:5:9:115,9,0
chr10	94516828	.	CAT	C	2892.70	PASS	AC=32;AF=0.762;AN=42;BaseQRankSum=0.558;DP=161;FS=7.507;HRun=0;HaplotypeScore=49.2085;InbreedingCoeff=0.6298;MQ=44.48;MQ0=0;MQRankSum=-0.396;QD=22.08;ReadPosRankSum=-0.005;VQSLOD=3.2789;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:18.06:0,18,272	./.	1/1:4,1:3:5.34:28,5,0	./.	0/0:2,0:2:0:0,0,0	1/1:1,10:11:30.09:371,30,0	1/1:3,8:11:21.07:260,21,0	1/1:5,19:24:54.14:644,54,0	0/0:1,0:1:0:0,0,0	./.	./.	1/1:2,2:4:6.02:74,6,0	1/1:2,5:7:15.05:185,15,0	1/1:3,2:5:9.01:98,9,0	0/0:2,0:2:0:0,0,0	./.	1/1:6,11:17:24.06:284,24,0	0/0:11,0:10:13.35:0,13,120	1/1:6,5:11:18.03:198,18,0	1/1:2,2:4:9.01:99,9,0	./.	1/1:0,4:4:9.03:111,9,0	1/1:2,1:3:3.01:37,3,0	1/1:2,1:3:9.01:97,9,0	./.	1/1:1,6:7:21.06:249,21,0	1/1:6,5:11:15.05:186,15,0	1/1:1,2:4:8.86:88,9,0
chr10	94517296	.	TA	T	11533.70	PASS	AB=0.929;AC=43;AF=0.768;AN=56;BaseQRankSum=11.654;DP=600;FS=26.208;HRun=7;HaplotypeScore=62.8877;InbreedingCoeff=0.9122;MQ=60.74;MQ0=1;MQRankSum=-0.943;QD=24.59;ReadPosRankSum=2.806;VQSLOD=3.2330;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:54.12:551,54,0	1/1:0,4:4:6.01:61,6,0	0/1:12,1:13:3.20:3,0,275	0/0:10,0:9:17.42:0,17,197	1/1:2,39:41:99:1161,117,0	1/1:5,22:27:60.13:612,60,0	1/1:3,16:18:39.09:398,39,0	1/1:4,25:28:72.09:706,72,0	1/1:0,18:18:48.11:489,48,0	1/1:5,38:43:99:1163,114,0	1/1:5,23:28:65.17:648,65,0	1/1:0,18:18:51.12:520,51,0	1/1:1,17:18:42.10:429,42,0	1/1:3,15:18:39.05:387,39,0	1/1:2,19:21:51.11:520,51,0	1/1:1,18:19:51.12:520,51,0	1/1:2,30:32:81.18:826,81,0	1/1:1,16:17:45.10:459,45,0	0/0:12,0:10:30.07:0,30,352	0/0:34,1:35:70.59:0,71,1159	0/0:21,0:21:57.17:0,57,702	1/1:2,15:17:42.09:429,42,0	1/1:1,21:22:54.12:551,54,0	1/1:1,10:11:24.05:245,24,0	1/1:4,16:20:48.11:490,48,0	0/0:24,0:24:63.19:0,63,778	0/0:29,0:29:75.23:0,75,927	1/1:0,13:13:36.08:367,36,0
chr10	94519094	.	A	ACCTGTGCCCCTGGCTG	25671.57	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=13.660;DP=625;FS=28.233;HRun=0;HaplotypeScore=335.8847;InbreedingCoeff=0.9257;MQ=62.18;MQ0=0;MQRankSum=-14.347;QD=56.92;ReadPosRankSum=0.134;VQSLOD=3.4103;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:32:25.56:1093,26,0	1/1:8,0:11:30.05:1283,30,0	0/0:22,0:20:45.13:0,45,1303	0/0:28,0:27:61.18:0,61,1443	1/1:8,0:21:20.92:776,21,0	1/1:5,0:18:33.10:1995,33,0	1/1:25,0:25:48.95:1756,49,0	1/1:40,0:37:72.21:1630,72,0	1/1:12,0:30:43.86:2022,44,0	1/1:8,0:24:33.46:1270,33,0	1/1:17,0:17:23.06:585,23,0	1/1:10,0:27:36.09:1949,36,0	1/1:16,0:23:69.16:2611,69,0	1/1:9,1:27:27.09:1310,27,0	1/1:10,0:22:25.26:1228,25,0	1/1:10,0:23:15.88:684,16,0	1/1:4,0:14:10.22:467,10,0	1/1:11,0:11:30.01:827,30,0	0/0:27,0:27:57.15:0,57,2127	0/0:16,0:16:39.13:0,39,1799	0/0:49,0:49:99:0,132,4828	1/1:22,0:19:42.74:878,43,0	1/1:8,0:21:23.77:1236,24,0	1/1:5,0:15:3.01:110,3,0	1/1:9,0:19:30.87:1761,31,0	0/0:23,0:23:66.22:0,66,2842	0/0:9,0:9:27.09:0,27,1215	1/1:3,0:7:3.01:199,3,0
chr10	94519288	.	A	AAC	2224.54	PASS	AB=0.890;AC=24;AF=0.500;AN=48;BaseQRankSum=-4.268;DP=467;FS=8.936;HRun=0;HaplotypeScore=84.0903;InbreedingCoeff=0.2628;MQ=74.35;MQ0=13;MQRankSum=-0.433;QD=8.30;ReadPosRankSum=-2.459;VQSLOD=1.5943;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:33:88.69:166,0,89	./.	./.	./.	./.	0/0:25,0:26:35.68:0,36,187	0/0:10,0:10:11.65:0,12,74	1/1:18,0:17:2.98:21,3,0	1/1:15,2:17:24.04:288,24,0	1/1:13,0:13:12.03:140,12,0	1/1:16,1:17:21.05:256,21,0	0/0:6,0:6:5.72:0,6,29	0/0:11,0:11:20.08:0,20,111	0/0:13,0:13:11.52:0,12,68	1/1:5,0:5:6.02:76,6,0	0/1:16,0:16:8.80:189,0,9	0/1:18,0:16:25.49:25,0,70	0/1:13,0:13:39.01:65,0,39	1/1:7,5:12:12.48:137,12,0	0/1:12,6:19:14.24:193,0,14	0/1:13,5:21:29.39:29,0,96	0/0:15,0:15:20.49:0,20,111	0/0:13,0:14:16.70:0,17,80	0/0:16,0:17:25.62:0,26,133	1/1:13,1:14:24.05:278,24,0	0/1:19,1:20:14.16:164,0,14	0/1:12,9:19:14.34:203,0,14	1/1:9,0:6:15.03:167,15,0
chr10	94519332	.	CA	C	1571	PASS	AB=0.900;AC=20;AF=0.357;AN=56;BaseQRankSum=3.326;DP=511;FS=4.529;HRun=1;HaplotypeScore=89.8185;InbreedingCoeff=0.5126;MQ=59.57;MQ0=13;MQRankSum=3.458;QD=7.01;ReadPosRankSum=-1.034;VQSLOD=0.3745;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:32.56:0,33,293	0/1:4,0:3:1.09:1,0,14	0/0:15,0:7:12.02:0,12,135	0/0:16,0:10:27.02:0,27,320	0/1:15,0:13:5.17:5,0,47	1/1:14,13:27:38.46:351,38,0	1/1:11,1:12:13.47:75,13,0	0/1:20,0:20:55.55:79,0,56	0/1:17,6:23:42.86:43,0,224	0/0:18,0:18:36.94:0,37,224	0/0:15,0:15:11.32:0,11,172	1/1:14,1:15:22:103,22,0	1/1:7,9:16:21.62:234,22,0	1/1:10,5:14:29.89:185,30,0	0/0:17,0:17:5.96:0,6,44	0/0:22,0:22:18.99:0,19,183	0/1:17,6:20:67:67,0,127	0/0:22,0:21:12.39:0,12,105	0/0:16,0:16:48.12:0,48,592	0/0:11,0:11:24.04:0,24,252	0/0:29,0:27:47.18:0,47,607	1/1:14,8:19:32.32:234,32,0	0/1:10,3:13:5.43:116,0,5	1/1:12,7:19:39.99:272,40,0	0/0:9,3:12:2.53:0,3,152	0/0:25,0:24:64.79:0,65,855	0/0:24,0:21:45.13:0,45,532	0/0:7,2:7:0.84:0,1,102
chr10	94519334	.	C	CACACT	6015.96	PASS	AB=0.741;AC=33;AF=0.589;AN=56;BaseQRankSum=-2.064;DP=498;FS=2.028;HRun=0;HaplotypeScore=108.8373;InbreedingCoeff=0.1458;MQ=59.83;MQ0=11;MQRankSum=-1.335;QD=15.39;ReadPosRankSum=1.269;VQSLOD=4.0802;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:2,0:32:54.67:202,0,55	1/1:1,0:3:8.96:87,9,0	0/0:15,0:7:11.99:0,12,109	0/0:16,0:11:26.91:0,27,233	1/1:3,0:13:12.37:120,12,0	0/1:24,0:26:99:344,0,140	0/1:5,0:11:45.66:59,0,46	1/1:3,0:19:48.04:511,48,0	1/1:13,1:23:35.52:777,36,0	1/1:3,15:18:42.60:639,43,0	1/1:6,0:12:24.55:430,25,0	0/1:2,0:15:6.08:218,0,6	0/1:15,0:18:21.75:250,0,22	1/1:9,0:15:3.83:274,4,0	1/1:0,0:17:6.02:82,6,0	1/1:1,0:21:9.06:212,9,0	0/1:13,0:21:54.38:407,0,54	0/1:3,15:19:41.84:128,0,42	0/0:14,0:14:28.25:0,28,271	0/0:12,0:12:17.55:0,18,139	0/0:26,0:24:47.59:0,48,566	0/1:15,0:19:25.85:204,0,26	0/1:13,0:14:23.28:23,0,66	0/1:13,0:18:39.11:185,0,39	1/1:9,0:14:33:553,33,0	0/1:24,0:24:29.60:30,0,394	0/0:22,0:20:45.76:0,46,363	1/1:2,0:7:21.07:281,21,0
chr10	94519428	.	A	AT	13400.77	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=10.224;DP=590;FS=0.000;HRun=6;HaplotypeScore=79.7111;InbreedingCoeff=0.9941;MQ=64.80;MQ0=0;MQRankSum=-3.020;QD=32.21;ReadPosRankSum=5.174;VQSLOD=4.4680;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:84.27:1057,84,0	1/1:0,6:6:18.06:226,18,0	0/0:21,0:18:48.10:0,48,481	0/0:15,0:15:39.08:0,39,393	1/1:0,20:20:60.19:755,60,0	1/1:2,31:33:78.25:972,78,0	1/1:1,9:10:21.07:264,21,0	1/1:9,18:27:45.10:548,45,0	1/1:1,24:25:69.22:868,69,0	1/1:1,18:19:54.17:678,54,0	1/1:1,11:12:33.06:392,33,0	1/1:2,13:15:45.14:566,45,0	1/1:1,20:21:60.19:754,60,0	1/1:2,19:21:54.17:677,54,0	1/1:0,19:19:45.14:566,45,0	1/1:1,23:24:60.19:755,60,0	1/1:2,22:24:57.18:712,57,0	1/1:0,6:6:15.05:189,15,0	0/0:22,0:22:63.11:0,63,629	0/0:24,0:23:69.16:0,69,704	0/0:35,0:35:99:0,102,1031	1/1:3,18:21:57.11:690,57,0	1/1:1,20:21:57.18:712,57,0	1/1:0,30:30:78.25:978,78,0	1/1:1,21:22:63.20:780,63,0	0/0:30,1:31:49.45:0,49,813	0/0:26,0:26:75.13:0,75,755	1/1:0,7:7:21.07:264,21,0
chr10	94520044	.	CATCTGTAAAGAGA	C	7877.64	PASS	AB=0.587;AC=40;AF=0.714;AN=56;BaseQRankSum=9.540;DP=247;FS=5.559;HRun=0;HaplotypeScore=89.8792;InbreedingCoeff=0.5905;MQ=38.46;MQ0=14;MQRankSum=-5.978;QD=54.33;ReadPosRankSum=-1.402;VQSLOD=3.9667;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,3:7:14.98:252,15,0	1/1:1,4:5:6.02:160,6,0	0/0:6,0:1:3.01:0,3,171	0/0:14,0:2:6.02:0,6,327	1/1:1,11:12:27.04:789,27,0	1/1:2,11:13:33.08:964,33,0	1/1:1,2:2:6.02:208,6,0	1/1:1,11:5:6.02:143,6,0	1/1:1,3:4:12.03:345,12,0	1/1:0,14:12:33.11:1180,33,0	1/1:0,8:7:12.04:418,12,0	0/1:1,6:7:99:420,0,168	1/1:1,2:3:6.01:130,6,0	1/1:0,2:2:3.01:111,3,0	1/1:2,2:4:9.02:185,9,0	1/1:0,8:8:17.91:642,18,0	1/1:1,4:4:12:343,12,0	0/1:6,8:12:99:552,0,233	0/0:16,0:15:45.15:0,45,2534	0/0:9,0:9:18.06:0,18,1025	0/0:24,0:24:62.74:0,63,4209	1/1:0,5:4:6.02:214,6,0	1/1:2,3:4:3.01:36,3,0	1/1:0,4:4:6.02:194,6,0	1/1:1,4:5:15.01:395,15,0	0/0:23,0:23:69.24:0,69,4511	0/0:10,0:10:30.10:0,30,1890	1/1:0,3:3:6.02:198,6,0
chr10	94520059	.	CG	C	1238.44	PASS	AB=0.566;AC=38;AF=0.704;AN=54;BaseQRankSum=11.229;DP=291;FS=13.759;HRun=2;HaplotypeScore=74.6565;InbreedingCoeff=0.5852;MQ=35.22;MQ0=21;MQRankSum=-5.716;QD=8.15;ReadPosRankSum=1.893;VQSLOD=-0.2778;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,3:6:1.56:50,2,0	1/1:1,4:5:5.99:50,6,0	0/0:19,0:3:9.03:0,9,122	0/0:33,0:9:24.06:0,24,321	1/1:0,11:11:13.96:114,14,0	1/1:2,11:12:12.20:138,12,0	1/1:2,2:4:5.85:33,6,0	0/1:5,11:10:2.31:2,0,13	1/1:1,3:4:8.86:57,9,0	1/1:0,14:12:32.55:222,33,0	1/1:2,8:9:17.59:109,18,0	0/1:1,6:7:11.93:72,0,12	1/1:2,2:4:0.94:28,1,0	1/1:0,2:2:2.99:24,3,0	1/1:3,2:5:1.90:41,2,0	1/1:2,8:10:17.75:120,18,0	1/1:4,4:7:7.37:75,7,0	1/1:7,8:14:3.92:124,4,0	0/0:19,0:16:48.16:0,48,701	0/0:9,0:9:15.05:0,15,224	0/0:25,0:25:69.22:0,69,1009	1/1:1,5:5:5.91:40,6,0	./.	1/1:0,4:4:3.87:24,4,0	1/1:1,4:4:11.66:69,12,0	0/0:20,0:20:57.19:0,57,846	0/0:10,0:10:30.10:0,30,449	1/1:0,3:3:4.77:24,5,0
chr10	94520120	.	T	TA	6282.79	PASS	AB=0.539;AC=36;AF=0.643;AN=56;BaseQRankSum=-1.282;DP=381;FS=12.802;HRun=9;HaplotypeScore=64.8901;InbreedingCoeff=0.8358;MQ=63.62;MQ0=0;MQRankSum=-1.770;QD=24.83;ReadPosRankSum=-1.519;VQSLOD=4.1901;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:38.98:0,39,339	1/1:0,4:5:14.87:147,15,0	0/0:11,0:11:23.23:0,23,207	0/0:4,0:3:6:0,6,52	1/1:3,18:21:31.10:570,31,0	1/1:4,12:16:30.08:331,30,0	1/1:2,10:12:30.08:332,30,0	1/1:14,33:45:84.17:907,84,0	1/1:2,13:15:39.10:430,39,0	1/1:3,11:14:30.08:332,30,0	1/1:1,16:17:42.11:465,42,0	1/1:3,5:8:18.05:197,18,0	1/1:1,10:11:33.05:351,33,0	1/1:0,7:7:15.04:166,15,0	1/1:0,10:11:29.91:313,30,0	1/1:2,13:15:16.07:405,16,0	0/0:15,0:15:44.99:0,45,390	0/1:3,15:17:6.99:385,0,7	0/0:18,0:18:44.97:0,45,391	0/0:16,0:16:44.99:0,45,391	0/0:11,0:11:32.96:0,33,279	1/1:0,4:4:12.03:132,12,0	1/1:1,5:7:17.88:180,18,0	0/1:1,7:8:7.66:148,0,8	1/1:1,5:6:17.22:159,17,0	0/0:25,0:26:57.84:0,58,585	0/0:11,0:11:29.99:0,30,260	1/1:0,11:11:30.08:332,30,0
chr10	94520493	.	TA	T	5037.40	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=1.702;DP=411;FS=0.426;HRun=10;HaplotypeScore=78.8723;InbreedingCoeff=0.9232;MQ=70.18;MQ0=0;MQRankSum=-1.769;QD=20.39;ReadPosRankSum=0.608;VQSLOD=5.5638;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:36.57:0,37,396	1/1:2,6:8:17.99:156,18,0	0/0:20,2:18:0.48:0,0,216	0/0:12,1:9:12.02:0,12,119	1/1:0,15:15:41.99:364,42,0	1/1:3,10:13:29.70:249,30,0	1/1:2,13:15:38.99:338,39,0	1/1:7,28:35:83.95:725,84,0	1/1:1,8:9:23.95:201,24,0	1/1:0,12:12:35.99:312,36,0	1/1:2,14:16:19.49:318,19,0	1/1:3,5:8:17.98:156,18,0	1/1:3,10:13:16.29:198,16,0	1/1:2,14:16:38.84:317,39,0	1/1:3,3:6:14.90:120,15,0	1/1:4,10:14:29.98:259,30,0	0/0:4,0:19:39.76:0,40,199	1/1:0,4:5:12.47:105,12,0	0/0:20,0:20:42.11:0,42,459	0/0:23,1:24:34.08:0,34,570	0/0:9,0:9:15.04:0,15,166	1/1:2,13:15:35.82:294,36,0	1/1:3,10:13:29.32:236,29,0	1/1:0,13:13:29.99:259,30,0	1/1:2,15:17:44.99:391,45,0	0/0:18,1:19:22.05:0,22,460	0/0:23,0:23:48.11:0,48,521	1/1:2,2:4:5.92:39,6,0
chr10	94520520	.	TAC	T	1601.23	PASS	AB=1.000;AC=12;AF=0.222;AN=54;BaseQRankSum=-2.902;DP=490;FS=12.045;HRun=0;HaplotypeScore=129.3197;InbreedingCoeff=0.5911;MQ=52.26;MQ0=8;MQRankSum=6.159;QD=12.41;ReadPosRankSum=1.569;VQSLOD=3.0583;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:8.97:0,9,75	0/0:14,0:11:5.34:0,5,38	0/0:31,0:14:3.01:0,3,46	0/0:23,0:9:2.84:0,3,14	0/0:20,0:19:2.46:0,2,25	0/0:15,0:17:17.61:0,18,154	0/0:22,0:22:5.92:0,6,47	0/0:38,0:34:39.01:0,39,434	0/0:16,0:15:3.01:0,3,38	0/0:18,0:18:32.89:0,33,320	0/1:23,0:23:0:0,0,0	0/0:8,0:11:8.68:0,9,78	0/0:15,0:16:20.70:0,21,184	0/0:12,0:14:9:0,9,83	0/1:11,0:11:0:0,0,0	0/0:15,0:15:2.81:0,3,44	0/0:17,0:19:17.99:0,18,181	./.	1/1:9,9:21:38.73:391,39,0	1/1:11,12:25:38.94:426,39,0	1/1:4,4:8:9.03:103,9,0	0/0:17,0:18:14.91:0,15,179	0/0:15,0:15:2.95:0,3,26	0/0:12,0:12:2.94:0,3,21	0/0:12,0:11:5.42:0,5,22	1/1:9,10:19:27.07:308,27,0	1/1:6,15:22:47.97:529,48,0	0/0:7,0:7:3.01:0,3,37
chr10	94521124	.	TAC	T	1178.40	PASS	AB=0.957;AC=25;AF=0.463;AN=54;BaseQRankSum=1.930;DP=557;FS=1.297;HRun=0;HaplotypeScore=90.3792;InbreedingCoeff=0.6163;MQ=63.41;MQ0=7;MQRankSum=1.456;QD=4.21;ReadPosRankSum=3.201;VQSLOD=2.4549;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:34:8.52:42,9,0	1/1:6,1:9:5.85:47,6,0	./.	0/0:22,0:18:3.01:0,3,38	1/1:7,4:11:3.01:33,3,0	0/1:15,1:16:17.85:18,0,99	0/0:12,0:17:12.01:0,12,139	0/0:20,0:20:31.08:0,31,279	1/1:14,6:21:3.84:211,4,0	1/1:13,4:16:12.02:123,12,0	1/1:11,5:16:6.01:66,6,0	0/0:8,0:12:15:0,15,141	0/1:14,1:23:14.80:15,0,108	0/0:9,0:12:11.99:0,12,122	1/1:13,9:24:29.41:253,29,0	1/1:13,5:18:17.88:178,18,0	1/1:14,0:20:16.84:79,17,0	1/1:13,1:16:8.83:68,9,0	0/0:18,0:18:14.93:0,15,134	0/0:18,0:27:12.03:0,12,155	0/1:22,1:33:18.14:18,0,102	0/0:20,0:20:26.99:0,27,293	0/0:13,0:17:5.58:0,6,71	0/0:15,0:33:39:0,39,375	1/1:12,5:19:26.50:224,27,0	0/0:19,0:19:27.65:0,28,238	0/0:7,0:19:15:0,15,131	0/0:21,0:20:39.18:0,39,328
chr10	94521141	.	A	ACACA	1606.16	PASS	AB=1.000;AC=22;AF=0.423;AN=52;BaseQRankSum=-7.333;DP=646;FS=0.000;HRun=0;HaplotypeScore=131.4370;InbreedingCoeff=0.2904;MQ=53.11;MQ0=13;MQRankSum=1.397;QD=4.71;ReadPosRankSum=-2.752;VQSLOD=1.9201;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:8.75:0,9,84	0/0:13,0:13:6.01:0,6,56	./.	./.	0/0:17,0:17:2.93:0,3,28	0/1:19,0:19:16.38:55,0,16	0/1:20,0:19:3.47:3,0,84	1/1:19,0:19:12.64:58,13,0	0/0:31,0:31:24.39:0,24,205	0/0:33,0:32:9.01:0,9,84	0/0:17,0:17:6.33:0,6,56	1/1:13,0:13:8.23:37,8,0	0/1:23,0:23:16.64:25,0,17	1/1:14,0:14:8.23:37,8,0	0/0:26,0:25:29.89:0,30,269	0/0:15,0:15:18.03:0,18,180	0/0:24,0:23:18.08:0,18,148	0/0:22,0:22:8.79:0,9,65	1/1:19,0:18:1.82:5,2,0	0/1:29,0:29:44.21:44,0,78	0/1:42,0:42:3.08:3,0,66	0/1:25,0:25:55.11:55,0,80	0/1:17,0:17:6.88:7,0,41	0/1:33,0:33:59.82:90,0,60	0/0:23,0:22:26.39:0,26,230	1/1:14,10:25:36.58:584,37,0	1/1:24,0:24:15.05:353,15,0	1/1:19,0:18:33.65:422,34,0
chr10	94521912	.	CAAT	C	9844.13	PASS	AB=0.941;AC=43;AF=0.768;AN=56;BaseQRankSum=9.107;DP=468;FS=1.725;HRun=0;HaplotypeScore=70.5438;InbreedingCoeff=0.8419;MQ=63.36;MQ0=0;MQRankSum=-2.219;QD=26.82;ReadPosRankSum=2.753;VQSLOD=4.9707;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,26:31:57.19:822,57,0	1/1:0,13:13:27.09:387,27,0	0/0:20,0:20:8.90:0,9,138	0/0:11,0:10:9.03:0,9,163	1/1:2,18:20:42.09:566,42,0	1/1:3,11:14:33.11:480,33,0	1/1:2,9:11:21.07:305,21,0	1/1:4,19:23:57.17:794,57,0	1/1:7,10:17:27.09:393,27,0	1/1:4,18:22:51:742,51,0	1/1:3,15:18:39.13:567,39,0	1/1:3,7:10:12.04:175,12,0	1/1:8,9:16:12.04:175,12,0	1/1:0,9:9:27.09:386,27,0	1/1:4,11:15:27.09:393,27,0	1/1:2,17:19:42.14:611,42,0	1/1:4,16:21:35.95:494,36,0	1/1:3,15:18:33.11:480,33,0	0/0:28,0:28:57.20:0,57,1156	0/0:19,0:19:51.13:0,51,1006	0/0:6,0:6:15.05:0,15,308	1/1:2,10:12:30.10:436,30,0	1/1:4,19:23:39.13:559,39,0	1/1:0,9:9:27.09:384,27,0	1/1:4,14:16:27.09:385,27,0	0/0:16,1:17:1.52:0,2,776	0/1:15,1:16:4.53:5,0,701	1/1:2,9:11:21.07:306,21,0
chr10	94522012	.	TTTGTTTTTTTTTTG	T	3911.86	PASS	AB=0.987;AC=34;AF=0.607;AN=56;BaseQRankSum=-2.300;DP=414;FS=9.767;HRun=0;HaplotypeScore=142.9759;InbreedingCoeff=0.5176;MQ=61.19;MQ0=13;MQRankSum=-1.683;QD=18.45;ReadPosRankSum=-3.976;VQSLOD=0.6237;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:1.56:0,2,700	0/1:6,0:6:30.17:97,0,30	0/0:43,0:15:23.13:0,23,709	0/0:41,0:12:13.59:0,14,637	0/1:14,0:14:52.72:53,0,53	1/1:11,2:13:30.72:498,31,0	1/1:11,1:12:13.89:340,14,0	1/1:24,0:24:37.39:347,37,0	0/1:12,0:12:19.92:192,0,20	1/1:10,0:10:11.13:151,11,0	1/1:17,0:17:18.16:217,18,0	1/1:15,0:15:3.48:96,3,0	1/1:8,1:8:10.11:308,10,0	1/1:15,0:15:6.02:189,6,0	1/1:12,0:12:5.17:226,5,0	1/1:8,0:8:3.63:361,4,0	0/0:13,0:13:32.91:0,33,517	0/1:17,1:18:31.88:280,0,32	0/0:21,0:21:63.18:0,63,2373	0/0:20,0:20:57.07:0,57,2324	0/0:7,0:7:15.51:0,16,489	1/1:2,0:2:2.97:20,3,0	1/1:0,1:1:3.01:123,3,0	1/1:8,0:8:15.98:94,16,0	1/1:11,0:11:10.59:148,11,0	0/0:17,0:17:23.46:0,23,2137	0/0:18,0:18:44.97:0,45,1990	1/1:5,0:5:10.76:173,11,0
chr10	94522013	.	TTGTTTTTTTTTTG	T	5021.51	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-3.863;DP=404;FS=0.952;HRun=0;HaplotypeScore=129.9288;InbreedingCoeff=0.7748;MQ=61.14;MQ0=13;MQRankSum=-2.815;QD=24.74;ReadPosRankSum=-4.672;VQSLOD=2.4050;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:0.88:0,1,456	0/1:6,0:6:3.37:116,0,3	0/0:43,0:15:16.29:0,16,627	0/0:40,0:12:8.94:0,9,574	1/1:13,0:13:2.02:85,2,0	1/1:13,0:13:35.95:563,36,0	1/1:8,2:10:28.75:394,29,0	1/1:20,0:20:49.96:427,50,0	1/1:11,1:12:23.61:287,24,0	1/1:1,9:10:14.29:216,14,0	1/1:16,1:17:39.97:319,40,0	1/1:1,14:15:5.98:138,6,0	1/1:6,2:7:20.41:430,20,0	1/1:0,15:15:6.02:236,6,0	1/1:11,1:12:32.57:332,33,0	1/1:7,1:8:21.67:434,22,0	0/0:13,0:13:28.40:0,28,357	1/1:16,1:17:20.21:372,20,0	0/0:21,0:21:63.09:0,63,2142	0/0:19,0:19:57.09:0,57,2132	0/0:7,0:7:14.94:0,15,435	1/1:0,2:2:2.97:20,3,0	1/1:1,0:1:3.01:107,3,0	1/1:8,0:8:20.86:171,21,0	1/1:10,1:11:24.56:180,25,0	0/0:17,0:17:23.34:0,23,1936	0/0:18,0:18:44.96:0,45,1806	1/1:4,1:5:14.94:196,15,0
chr10	94522014	.	TG	T	4060.08	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-1.941;DP=406;FS=2.217;HRun=1;HaplotypeScore=64.8132;InbreedingCoeff=0.8550;MQ=59.63;MQ0=13;MQRankSum=-4.298;QD=16.92;ReadPosRankSum=-4.789;VQSLOD=2.2851;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,1:22:54.11:381,54,0	1/1:6,0:7:6.77:81,7,0	0/0:43,0:15:8.25:0,8,152	0/0:39,0:11:12.94:0,13,120	1/1:12,0:13:31.19:211,31,0	1/1:13,0:13:34.49:280,34,0	1/1:12,0:12:26.91:205,27,0	1/1:19,0:19:49.95:416,50,0	1/1:9,2:11:29.91:252,30,0	1/1:10,0:10:14.78:127,15,0	1/1:18,0:18:46.30:351,46,0	1/1:14,1:15:5.97:47,6,0	1/1:8,0:7:20.88:173,21,0	1/1:15,0:15:6:54,6,0	1/1:12,0:12:35.62:282,36,0	1/1:7,0:8:24:213,24,0	1/1:13,0:13:32.74:243,33,0	1/1:16,1:17:32.24:263,32,0	0/0:21,0:21:59.03:0,59,519	0/0:19,0:19:57.03:0,57,558	0/0:7,0:7:12.69:0,13,120	1/1:2,0:2:2.97:20,3,0	1/1:1,0:1:3:25,3,0	1/1:7,1:8:17.39:126,17,0	1/1:11,0:11:26.53:194,27,0	0/0:17,0:17:15.87:0,16,430	0/0:19,0:19:37.95:0,38,433	1/1:4,1:5:14.93:115,15,0
chr10	94522023	.	TTTG	T	1877.90	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=1.329;DP=357;FS=19.144;HRun=0;HaplotypeScore=67.6117;InbreedingCoeff=0.7124;MQ=52.34;MQ0=17;MQRankSum=-5.252;QD=9.21;ReadPosRankSum=-5.191;VQSLOD=-0.4317;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:45.13:331,45,0	0/1:3,0:3:2.32:27,0,2	0/0:38,0:10:1.43:0,1,91	0/0:35,0:8:11.92:0,12,118	1/1:13,1:14:16.80:93,17,0	1/1:8,1:8:18.80:144,19,0	1/1:8,2:10:21.23:167,21,0	1/1:4,1:5:11.94:104,12,0	1/1:12,1:13:14.68:125,15,0	1/1:10,0:11:3.36:32,3,0	1/1:13,0:13:12.19:109,12,0	1/1:15,0:15:3.01:30,3,0	1/1:6,0:5:14.55:114,15,0	1/1:15,0:15:6.01:60,6,0	1/1:5,0:5:8.95:71,9,0	1/1:8,0:7:12.86:107,13,0	1/1:12,0:12:27.60:187,28,0	1/1:11,1:12:15.70:116,16,0	0/0:19,0:18:36.14:0,36,351	0/0:15,0:15:38.19:0,38,288	0/0:8,0:8:10.95:0,11,67	0/1:3,0:2:0:0,0,0	1/1:5,0:5:11.67:80,12,0	1/1:7,1:7:11.93:100,12,0	1/1:8,0:8:2.96:19,3,0	0/0:18,0:18:40.70:0,41,329	0/0:20,0:20:28.23:0,28,201	1/1:5,0:4:7.16:45,7,0
chr10	94522024	.	TTG	T	1983.36	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=0.992;DP=342;FS=16.977;HRun=0;HaplotypeScore=60.8025;InbreedingCoeff=0.7407;MQ=52.63;MQ0=17;MQRankSum=-5.476;QD=10.33;ReadPosRankSum=-4.746;VQSLOD=0.6569;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:44.67:331,45,0	1/1:3,0:3:4.25:30,4,0	0/0:38,0:10:1.12:0,1,68	0/0:33,0:8:11.28:0,11,71	1/1:12,0:12:16.56:100,17,0	1/1:7,1:7:18.35:147,18,0	1/1:10,0:10:19.96:139,20,0	1/1:5,0:5:11.93:98,12,0	1/1:10,0:10:20.90:166,21,0	1/1:11,0:11:5.74:43,6,0	1/1:11,0:11:11.92:115,12,0	1/1:15,0:15:2.99:23,3,0	1/1:6,0:5:12.23:75,12,0	1/1:15,0:15:5.98:46,6,0	1/1:2,1:3:8.97:83,9,0	1/1:7,0:6:17.87:132,18,0	1/1:12,0:12:26.67:188,27,0	1/1:9,1:10:17.84:145,18,0	0/0:19,0:18:28.32:0,28,205	0/0:15,0:15:28.87:0,29,137	0/0:8,0:8:7.52:0,8,34	0/1:3,0:2:0:0,0,0	1/1:5,0:5:14.78:102,15,0	1/1:8,1:8:11.94:107,12,0	1/1:1,6:7:3.01:40,3,0	0/0:18,0:18:29.06:0,29,186	0/0:19,0:19:18.53:0,19,79	1/1:6,0:5:6.94:53,7,0
chr10	94522025	.	TG	T	1988.18	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=3.991;DP=336;FS=6.509;HRun=1;HaplotypeScore=55.9075;InbreedingCoeff=0.1488;MQ=53.03;MQ0=16;MQRankSum=-2.869;QD=7.39;ReadPosRankSum=2.391;VQSLOD=0.8068;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:45.14:332,45,0	1/1:2,1:3:5.95:41,6,0	0/0:32,3:9:0.79:0,1,35	0/0:30,1:8:3.47:0,3,28	1/1:10,0:10:16.66:110,17,0	1/1:8,0:7:19.10:117,19,0	1/1:10,0:10:22.59:136,23,0	1/1:4,1:5:11.92:88,12,0	1/1:9,0:9:20.82:154,21,0	1/1:11,0:11:5.89:38,6,0	1/1:10,1:11:13.81:121,14,0	1/1:15,0:15:2.92:17,3,0	1/1:6,0:5:12.06:57,12,0	1/1:15,0:15:5.85:34,6,0	1/1:3,0:3:8.89:63,9,0	1/1:7,0:6:17.58:114,18,0	1/1:11,0:11:23.73:171,24,0	1/1:9,1:10:20.69:143,21,0	0/1:19,0:18:21.41:21,0,122	0/1:16,0:16:17.83:18,0,42	0/1:9,0:9:9.21:12,0,9	0/1:3,0:2:0:0,0,0	1/1:5,0:5:14.75:99,15,0	1/1:9,0:8:11.94:93,12,0	1/1:7,0:7:3:26,3,0	0/1:18,0:18:14.42:14,0,110	0/1:19,0:19:3.83:47,0,4	1/1:6,0:5:9.08:53,9,0
chr10	94522026	.	GT	G	1081.77	PASS	AB=1.000;AC=39;AF=0.722;AN=54;BaseQRankSum=-0.516;DP=324;FS=5.694;HRun=10;HaplotypeScore=57.8464;InbreedingCoeff=0.2879;MQ=51.45;MQ0=17;MQRankSum=1.473;QD=4.14;ReadPosRankSum=5.213;VQSLOD=-0.3516;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:0.02:0,0,0	1/1:3,0:3:1.50:4,2,0	0/0:34,0:8:0:0,0,0	0/1:29,0:8:1.71:2,0,17	0/0:10,0:10:0.98:0,1,28	0/1:8,0:7:9.42:9,0,10	0/1:10,0:10:3.64:4,0,14	0/1:6,0:6:1.36:1,0,14	1/1:8,0:8:3.17:9,3,0	1/1:11,0:11:1.20:3,1,0	0/1:10,0:10:0.08:0,0,55	1/1:14,0:14:1.25:3,1,0	0/1:6,0:5:1.59:2,0,28	1/1:15,0:15:2.49:7,2,0	1/1:3,0:3:2.13:5,2,0	1/1:7,0:6:6.64:18,7,0	0/0:11,0:11:0.47:0,0,1	1/1:9,0:8:3.65:9,4,0	1/1:9,10:18:26.99:247,27,0	1/1:3,12:15:7.53:249,8,0	1/1:2,7:9:9:82,9,0	./.	1/1:5,0:5:0.13:2,0,0	1/1:8,0:7:0.94:2,1,0	1/1:7,0:7:0.89:2,1,0	1/1:6,12:18:29.98:267,30,0	1/1:3,15:18:30.01:274,30,0	0/0:5,0:4:2.99:0,3,34
chr10	94522846	.	GC	G	47.32	PASS	AC=4;AF=0.083;AN=48;BaseQRankSum=0.570;DP=137;FS=2.456;HRun=4;HaplotypeScore=34.7007;InbreedingCoeff=0.3478;MQ=109.62;MQ0=7;MQRankSum=-0.205;QD=11.83;ReadPosRankSum=0.657;VQSLOD=0.9882;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:6.02:72,6,0	./.	0/0:16,0:8:15.02:0,15,171	0/0:38,0:23:43.78:0,44,406	0/0:3,0:3:9.03:0,9,126	./.	0/0:3,0:3:6.02:0,6,84	0/0:4,0:4:12.04:0,12,164	0/0:11,0:11:20.72:0,21,209	0/0:5,0:5:8.92:0,9,98	0/0:2,0:2:3.01:0,3,42	0/0:2,0:2:4.26:0,4,45	0/0:2,0:2:3.01:0,3,39	0/0:6,0:6:12.04:0,12,167	0/0:6,0:6:14.73:0,15,131	0/0:8,0:8:21.07:0,21,293	1/1:0,2:2:6.02:72,6,0	0/0:6,0:6:17.10:0,17,140	0/0:3,0:3:6.02:0,6,82	./.	0/0:3,0:3:9.03:0,9,123	0/0:1,0:1:3.01:0,3,41	./.	0/0:3,0:3:3.48:0,3,41	0/0:3,0:3:6.02:0,6,82	0/0:3,0:3:6.49:0,6,85	0/0:3,0:3:3.01:0,3,41	0/0:1,0:1:3.01:0,3,42
chr10	94522852	.	CCCCGCCCCGCCCCG	C	1352.58	PASS	AC=12;AF=0.333;AN=36;BaseQRankSum=-1.134;DP=123;FS=2.913;HRun=0;HaplotypeScore=57.2688;InbreedingCoeff=0.5228;MQ=111.54;MQ0=7;MQRankSum=-2.862;QD=34.68;ReadPosRankSum=3.693;VQSLOD=1.9791;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:3:0,3,25	./.	0/0:14,0:6:8.55:0,9,198	0/0:42,0:25:40.54:0,41,660	1/1:3,0:3:3.01:45,3,0	./.	0/0:2,0:2:3.01:0,3,44	./.	1/1:4,8:12:9.03:366,9,0	1/1:1,2:3:6.02:164,6,0	./.	0/0:2,0:2:1.25:0,1,3	0/0:1,0:1:3.01:0,3,75	0/0:5,0:5:6.02:0,6,133	1/1:2,4:6:9.03:366,9,0	1/1:7,0:7:6:51,6,0	0/0:2,0:2:3.01:0,3,42	1/1:2,6:8:12.04:488,12,0	./.	./.	0/0:2,0:2:6.01:0,6,93	./.	./.	0/0:2,0:2:1.25:0,1,3	./.	0/0:3,0:3:3.47:0,3,29	0/0:1,0:1:2.99:0,3,24	./.
chr10	94522866	.	G	GC	249.71	PASS	AB=1.000;AC=13;AF=0.325;AN=40;BaseQRankSum=-2.456;DP=103;FS=2.767;HRun=4;HaplotypeScore=32.8905;InbreedingCoeff=0.3473;MQ=111.82;MQ0=5;MQRankSum=1.839;QD=12.49;ReadPosRankSum=-2.854;VQSLOD=0.5934;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,2:2:3.01:42,3,0	0/0:11,0:5:12.39:0,12,113	0/0:32,1:21:3.20:0,3,234	1/1:2,0:2:6.02:80,6,0	0/0:1,0:1:3.01:0,3,36	0/0:1,0:1:3.01:0,3,36	1/1:1,1:2:3.01:41,3,0	0/0:8,0:8:3.27:0,3,8	1/1:3,0:3:0.73:38,1,0	./.	0/0:3,0:3:5.16:0,5,70	0/0:2,0:2:3.01:0,3,35	0/0:5,0:5:11.76:0,12,103	0/0:4,0:4:4.66:0,5,11	1/1:3,0:3:9.03:119,9,0	./.	0/0:6,0:6:5.91:0,6,15	0/0:2,0:2:3.01:0,3,35	./.	0/1:7,0:7:11.81:12,0,94	./.	./.	./.	1/1:0,1:1:3.01:42,3,0	0/0:2,0:2:0.58:0,1,29	0/0:3,0:3:6.02:0,6,71	./.
chr10	94524779	.	T	TAA	10100.50	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-0.515;DP=541;FS=12.751;HRun=10;HaplotypeScore=90.1642;InbreedingCoeff=0.9777;MQ=85.13;MQ0=1;MQRankSum=-4.287;QD=23.06;ReadPosRankSum=0.572;VQSLOD=2.8590;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:61.82:0,62,636	1/1:4,5:9:15.05:223,15,0	0/0:27,0:26:56.16:0,56,490	0/0:20,0:17:18.99:0,19,159	1/1:7,24:32:68.55:877,69,0	1/1:2,12:15:35.61:501,36,0	1/1:3,6:10:20.56:277,21,0	1/1:8,24:34:77.71:1064,78,0	1/1:1,18:20:50.66:724,51,0	1/1:5,0:30:62.11:217,62,0	1/1:4,0:22:42.57:156,43,0	1/1:2,18:20:36.12:536,36,0	1/1:5,7:12:18.06:269,18,0	1/1:1,10:13:29.07:376,29,0	1/1:1,17:19:48.15:715,48,0	1/1:1,12:13:36.12:537,36,0	0/0:28,0:29:71.87:0,72,784	1/1:1,13:15:39.13:565,39,0	1/1:1,0:14:33.19:133,33,0	1/1:6,0:25:19.35:190,19,0	1/1:2,0:16:27.32:97,27,0	1/1:0,12:13:32.98:417,33,0	1/1:4,15:21:44.97:638,45,0	1/1:0,6:7:17.55:233,18,0	1/1:3,14:18:42.14:619,42,0	1/1:2,0:18:12.48:110,12,0	1/1:8,0:28:37.43:132,37,0	1/1:1,12:13:33.11:492,33,0
chr10	94526441	.	A	AACCAAC	1553.04	PASS	AB=0.710;AC=3;AF=0.054;AN=56;BaseQRankSum=0.323;DP=642;FS=10.423;HRun=0;HaplotypeScore=130.1999;InbreedingCoeff=0.6382;MQ=71.98;MQ0=0;MQRankSum=-6.301;QD=31.06;ReadPosRankSum=0.760;VQSLOD=2.5296;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,14:28:33.11:1078,33,0	0/0:5,0:5:15.05:0,15,323	0/0:21,0:21:45.10:0,45,858	0/0:22,0:22:38.29:0,38,842	0/0:25,0:25:54.17:0,54,1123	0/0:19,0:19:48.15:0,48,993	0/0:27,0:27:63.20:0,63,1301	0/0:39,0:39:81.26:0,81,1704	0/0:29,0:29:60.21:0,60,1276	0/0:27,0:27:57.20:0,57,1228	0/0:19,0:19:48.15:0,48,994	0/0:29,0:29:75.25:0,75,1577	0/0:13,0:13:33.10:0,33,652	0/0:25,0:25:57.19:0,57,1190	0/0:25,0:25:63.22:0,63,1357	0/0:12,0:12:33.11:0,33,711	0/1:13,9:22:43.52:581,0,44	0/0:27,0:27:69.21:0,69,1387	0/0:22,0:22:42.12:0,42,862	0/0:29,0:29:72.22:0,72,1455	0/0:35,0:35:87.28:0,87,1818	0/0:17,0:17:45.15:0,45,969	0/0:21,0:21:48.16:0,48,1019	0/0:21,0:21:60.19:0,60,1251	0/0:21,0:21:54.17:0,54,1123	0/0:29,0:29:66.23:0,66,1412	0/0:24,0:23:60.21:0,60,1292	0/0:9,0:9:21.07:0,21,435
chr10	94526639	.	C	CT	10998.65	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-16.274;DP=618;FS=4.689;HRun=7;HaplotypeScore=60.5134;InbreedingCoeff=0.9978;MQ=85.12;MQ0=0;MQRankSum=-3.237;QD=31.51;ReadPosRankSum=1.060;VQSLOD=5.0851;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.04:0,63,597	1/1:1,10:11:27.08:326,27,0	0/0:25,0:25:24.52:0,25,377	0/0:16,0:15:16.61:0,17,241	1/1:3,27:30:81.21:962,81,0	1/1:2,20:22:54.17:652,54,0	1/1:2,12:14:33.10:399,33,0	1/1:2,24:26:72.13:796,72,0	1/1:1,22:23:63.19:761,63,0	0/0:34,0:34:93.12:0,93,885	0/0:35,0:35:99:0,99,941	1/1:2,23:25:63.19:761,63,0	1/1:1,12:13:36.11:435,36,0	1/1:1,13:14:39.12:471,39,0	1/1:1,23:24:60.18:725,60,0	1/1:0,22:22:66.20:797,66,0	0/0:20,0:20:57.09:0,57,550	1/1:2,14:16:39.12:471,39,0	0/0:25,0:25:72.12:0,72,695	0/0:28,0:28:63.09:0,63,603	0/0:15,0:15:45.07:0,45,434	1/1:2,34:36:99:1196,99,0	1/1:1,26:27:65.61:796,66,0	1/1:0,10:10:30.09:362,30,0	1/1:2,18:20:51.16:616,51,0	0/0:25,0:25:72.12:0,72,695	0/0:21,0:20:57.09:0,57,550	1/1:2,14:16:39.12:471,39,0
chr10	94528315	.	G	GACTTAAAGAATTTGAC	58718.71	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-5.114;DP=635;FS=0.000;HRun=0;HaplotypeScore=234.0047;InbreedingCoeff=0.9940;MQ=90.22;MQ0=0;MQRankSum=-19.845;QD=182.92;ReadPosRankSum=2.572;VQSLOD=5.0686;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,4156	1/1:2,4:7:18.06:1246,18,0	0/0:35,0:35:99:0,105,3892	0/0:26,0:26:75.21:0,75,2786	1/1:8,14:25:66.23:4024,66,0	1/1:7,13:22:57.20:4268,57,0	1/1:6,3:10:24.08:1499,24,0	1/1:22,2:28:84.27:5289,84,0	1/1:7,15:28:66.23:5214,66,0	0/0:31,0:31:90.31:0,90,4190	0/0:30,0:30:90.30:0,90,4143	1/1:4,13:19:51.18:3689,51,0	1/1:9,3:14:36.12:2374,36,0	1/1:11,12:25:63.22:4431,63,0	1/1:11,14:27:75.26:5134,75,0	1/1:7,13:22:60.21:4570,60,0	0/0:29,0:29:84.29:0,84,3806	1/1:5,2:8:15.05:1082,15,0	0/0:19,0:19:57.20:0,57,2511	0/0:26,0:26:78.27:0,78,3492	0/0:29,0:29:87.26:0,87,3698	1/1:11,13:24:69.24:4898,69,0	1/1:7,11:20:54.19:3974,54,0	1/1:1,7:12:18.06:1118,18,0	1/1:7,13:22:60.21:4457,60,0	0/0:28,0:28:84.23:0,84,3509	0/0:25,0:25:75.24:0,75,3376	1/1:2,4:8:18.06:1452,18,0
chr10	94528873	.	CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	C	497.35	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=5.909;DP=837;FS=11.424;HRun=0;HaplotypeScore=514.0052;InbreedingCoeff=0.6750;MQ=55.11;MQ0=92;MQRankSum=1.747;QD=10.81;ReadPosRankSum=-3.088;VQSLOD=-0.1532;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:28:36.59:0,37,1957	0/0:6,0:6:6.02:0,6,600	0/0:40,0:16:0:0,0,0	0/0:46,0:22:1.24:0,1,3	0/0:31,0:29:30.30:0,30,1806	0/0:25,0:22:33.11:0,33,1463	0/0:41,0:28:24.06:0,24,868	0/0:34,0:32:21.88:0,22,523	0/0:24,0:24:27.09:0,27,2347	1/1:29,17:40:36.23:591,36,0	./.	0/0:19,0:17:24.08:0,24,970	0/0:13,0:10:9.03:0,9,447	0/0:24,0:19:21.54:0,22,965	0/0:37,0:31:36.58:0,37,2833	0/0:28,0:29:36.12:0,36,2809	0/0:38,0:31:40.53:0,41,2848	0/0:21,0:16:33.11:0,33,3151	0/0:25,0:21:27.53:0,28,1631	0/0:12,0:10:6.02:0,6,480	0/0:80,0:70:45.54:0,46,2976	0/0:26,0:24:24.55:0,25,923	0/0:18,0:17:12.20:0,12,644	0/0:41,0:37:48.64:0,49,2316	0/0:27,0:22:15.02:0,15,1134	0/0:25,0:22:30.10:0,30,2426	0/0:32,0:30:51.65:0,52,4068	./.
chr10	94530420	.	C	CGTGTGT	12092.65	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-10.422;DP=644;FS=13.805;HRun=0;HaplotypeScore=169.1749;InbreedingCoeff=0.9706;MQ=60.65;MQ0=2;MQRankSum=-13.142;QD=36.31;ReadPosRankSum=3.699;VQSLOD=3.9845;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:40:12.67:0,13,35	1/1:1,3:5:9.03:303,9,0	0/0:23,0:18:39.96:0,40,638	0/0:32,0:29:40.11:0,40,990	1/1:4,11:20:18.06:571,18,0	1/1:5,11:18:15.05:443,15,0	1/1:8,27:37:39.13:1275,39,0	1/1:8,8:24:48.03:1042,48,0	1/1:4,9:15:15.05:505,15,0	0/0:23,0:23:51.17:0,51,1112	0/0:18,0:18:45.15:0,45,948	1/1:6,17:27:33.11:1084,33,0	1/1:4,10:15:24.08:808,24,0	1/1:7,10:20:21.07:702,21,0	1/1:3,9:17:24.08:808,24,0	1/1:4,22:30:36.12:1181,36,0	0/0:23,0:24:71.98:0,72,1484	1/1:5,7:15:18.03:464,18,0	0/0:18,0:18:45.14:0,45,894	0/0:18,0:18:41.99:0,42,773	0/0:60,0:62:99:0,150,2840	1/1:4,8:12:18.06:606,18,0	1/1:3,8:13:15.05:505,15,0	1/1:10,15:29:11.85:342,12,0	1/1:7,12:22:27.09:847,27,0	0/0:30,0:30:72.25:0,72,1525	0/0:23,0:23:62.68:0,63,1138	1/1:7,6:13:18.06:607,18,0
chr10	94531524	.	A	AT	3780.86	PASS	AB=0.778;AC=34;AF=0.607;AN=56;BaseQRankSum=-5.618;DP=449;FS=17.632;HRun=12;HaplotypeScore=57.9987;InbreedingCoeff=0.7566;MQ=75.35;MQ0=3;MQRankSum=1.110;QD=16.02;ReadPosRankSum=0.068;VQSLOD=2.7556;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:35:82.34:0,82,588	1/1:5,4:10:8.85:73,9,0	0/1:20,0:11:18.15:18,0,23	0/0:19,0:12:2.08:0,2,67	1/1:7,14:21:47.59:423,48,0	1/1:4,15:19:17.15:328,17,0	1/1:2,15:17:17.22:328,17,0	1/1:8,16:25:29.58:422,30,0	1/1:1,13:14:33.05:321,33,0	0/0:21,0:22:52.54:0,53,369	0/0:21,1:22:27.46:0,27,363	1/1:1,9:10:10.18:217,10,0	1/1:0,13:13:24.04:234,24,0	1/1:1,7:8:15.02:146,15,0	1/1:1,13:14:8.14:241,8,0	1/1:3,7:11:23.87:218,24,0	0/0:27,0:27:71.72:0,72,539	0/1:4,15:20:10.18:317,0,10	0/0:23,0:24:49.71:0,50,355	0/0:9,0:9:20.87:0,21,153	0/0:12,0:12:23.85:0,24,175	1/1:0,6:6:15.02:146,15,0	1/1:2,2:4:6.01:58,6,0	1/1:0,7:7:9.01:88,9,0	1/1:5,9:14:15.02:146,15,0	0/0:24,1:25:29.50:0,30,371	0/0:17,0:17:35.64:0,36,257	1/1:0,3:3:6.01:58,6,0
chr10	94532796	.	GGA	G	2588.21	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.964;DP=763;FS=9.458;HRun=0;HaplotypeScore=89.1830;InbreedingCoeff=0.9958;MQ=91.15;MQ0=0;MQRankSum=-2.289;QD=38.63;ReadPosRankSum=0.339;VQSLOD=5.0771;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1883	0/0:12,0:12:36.12:0,36,695	0/0:32,0:32:87.19:0,87,1479	0/0:30,0:30:86.88:0,87,1473	0/0:32,0:32:93.22:0,93,1699	0/0:26,0:26:78.27:0,78,1505	0/0:19,0:19:54.18:0,54,1030	0/0:41,0:41:99:0,123,2271	0/0:31,0:31:90.29:0,90,1704	1/1:1,44:45:99:1837,129,0	1/1:1,21:22:57.19:873,57,0	0/0:33,0:33:87.30:0,87,1679	0/0:20,0:20:57.20:0,57,1096	0/0:19,0:19:54.18:0,54,1038	0/0:34,0:34:99:0,99,1821	0/0:29,0:29:87.29:0,87,1637	0/0:34,0:34:99:0,102,1906	0/0:18,0:18:54.19:0,54,1042	0/0:16,0:16:47.90:0,48,880	0/0:28,0:28:84.15:0,84,1578	0/0:39,0:39:99:0,114,2117	0/0:22,0:22:66.23:0,66,1266	0/0:22,0:22:66.23:0,66,1262	0/0:30,0:29:90.31:0,90,1737	0/0:23,0:23:66.23:0,66,1275	0/0:34,1:35:59.42:0,59,1877	0/0:30,0:30:90.30:0,90,1700	0/0:7,0:7:18.03:0,18,312
chr10	94533108	.	A	ATT	5427.21	PASS	AB=0.586;AC=32;AF=0.571;AN=56;BaseQRankSum=7.258;DP=661;FS=5.636;HRun=11;HaplotypeScore=97.2701;InbreedingCoeff=0.8247;MQ=69.99;MQ0=0;MQRankSum=0.173;QD=14.55;ReadPosRankSum=0.321;VQSLOD=3.6276;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:45:99:0,117,1117	1/1:2,10:13:27.03:336,27,0	0/0:16,0:16:17.93:0,18,162	0/0:11,0:11:9.17:0,9,70	1/1:6,17:25:54.82:688,55,0	1/1:6,2:24:12.36:169,12,0	1/1:5,0:25:3.85:74,4,0	1/1:6,0:28:15.91:206,16,0	1/1:5,16:23:36.12:507,36,0	0/0:31,0:31:78.10:0,78,757	0/0:22,0:24:50.50:0,50,460	1/1:3,1:20:38.41:157,38,0	1/1:5,0:31:53.38:209,53,0	1/1:2,1:22:13.15:104,13,0	1/1:5,20:26:54.84:704,55,0	1/1:2,25:30:53.47:718,53,0	0/0:35,0:35:90.05:0,90,865	1/1:5,20:27:48.16:695,48,0	0/0:21,0:22:53.78:0,54,501	0/0:28,0:29:80.86:0,81,768	0/0:28,0:30:56.71:0,57,535	1/1:1,0:17:12.51:132,13,0	0/1:1,0:9:6.13:46,0,6	1/1:3,0:23:16.33:117,16,0	1/1:3,17:21:41.59:547,42,0	0/0:26,0:26:66.06:0,66,635	0/0:19,0:18:41.99:0,42,407	0/1:4,0:9:18.28:18,0,42
chr10	94533933	.	ACTCTGGGTCATG	A	11256.05	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.392;DP=615;FS=1.296;HRun=0;HaplotypeScore=216.5432;InbreedingCoeff=0.9994;MQ=79.25;MQ0=0;MQRankSum=-13.048;QD=85.92;ReadPosRankSum=1.125;VQSLOD=4.8005;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,7826	0/0:8,0:8:24.08:0,24,1422	0/0:20,0:20:54.10:0,54,2784	0/0:15,0:15:42.12:0,42,1965	0/0:27,0:27:78.27:0,78,4604	0/0:19,0:19:57.20:0,57,3357	0/0:28,0:28:84.29:0,84,4713	0/0:32,0:32:93.32:0,93,4897	0/0:13,0:13:39.13:0,39,2110	1/1:2,17:19:54.19:1887,54,0	1/1:1,15:16:42.14:1450,42,0	0/0:35,0:35:99:0,105,6051	0/0:13,0:13:39.13:0,39,2204	0/0:24,0:24:69.24:0,69,3921	0/0:22,0:22:66.23:0,66,3583	0/0:32,0:32:96.33:0,96,5862	0/0:25,0:25:75.22:0,75,4177	0/0:31,0:31:93.28:0,93,4971	1/1:3,12:15:36.11:1205,36,0	1/1:1,13:14:36.12:1337,36,0	1/1:5,16:21:33.06:1083,33,0	0/0:15,0:15:42.14:0,42,2211	0/0:22,0:22:60.21:0,60,3559	0/0:25,0:25:75.21:0,75,4115	0/0:14,0:14:36.11:0,36,2072	1/1:1,19:20:57.20:2032,57,0	1/1:6,20:26:60.21:2261,60,0	0/0:15,0:15:36.12:0,36,1993
chr10	94534600	.	T	TG	2123.44	PASS	AB=0.740;AC=20;AF=0.357;AN=56;BaseQRankSum=13.668;DP=526;FS=7.111;HRun=1;HaplotypeScore=130.1705;InbreedingCoeff=-0.0055;MQ=71.75;MQ0=4;MQRankSum=-10.805;QD=8.20;ReadPosRankSum=8.353;VQSLOD=0.5183;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:99:0,120,1674	0/1:4,2:5:12.03:19,0,12	0/0:11,0:11:33.09:0,33,407	0/0:13,0:14:39.10:0,39,491	1/1:8,1:9:2.88:25,3,0	0/1:13,2:15:35.03:59,0,35	0/1:12,8:19:28.62:148,0,29	0/1:21,2:23:29.25:29,0,365	1/1:12,11:23:20.98:316,21,0	0/0:26,0:26:78.25:0,78,1059	0/0:9,0:9:24.08:0,24,335	0/1:7,9:14:21.07:150,0,21	0/1:10,10:20:18.06:243,0,18	1/1:11,9:20:20.80:289,21,0	0/1:11,5:16:0.05:132,0,0	0/1:8,13:21:11.94:333,0,12	0/0:39,0:39:99:0,111,1549	0/1:6,7:13:99:101,0,101	0/0:19,0:19:57.17:0,57,777	0/0:10,0:10:27.06:0,27,341	0/0:48,0:48:99:0,144,1991	0/1:10,2:12:25.04:38,0,25	0/1:6,2:8:5.05:86,0,5	0/1:5,7:11:23.98:104,0,24	0/1:16,3:19:16.62:108,0,17	0/0:25,0:25:72.24:0,72,1005	0/0:24,0:24:72.24:0,72,1005	0/1:2,4:6:3.92:115,0,4
chr10	94534601	.	C	CTTCAGGTCAGCTGTG	33973.21	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=9.960;DP=529;FS=0.325;HRun=0;HaplotypeScore=231.2888;InbreedingCoeff=0.9910;MQ=72.48;MQ0=4;MQRankSum=-14.723;QD=130.67;ReadPosRankSum=4.824;VQSLOD=4.2045;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:99:0,120,3455	1/1:5,1:5:12.04:601,12,0	0/0:12,0:12:21.61:0,22,732	0/0:14,0:14:33.43:0,33,1006	1/1:8,1:9:27.09:1260,27,0	1/1:13,2:15:45.12:1934,45,0	1/1:14,6:19:48.10:2223,48,0	1/1:23,0:23:69.19:2564,69,0	1/1:12,11:23:69.19:3772,69,0	0/0:26,0:26:72.19:0,72,2196	0/0:9,0:9:27.05:0,27,788	1/1:9,7:14:39.11:2028,39,0	1/1:11,8:20:60.15:3029,60,0	1/1:11,8:20:54.10:2936,54,0	1/1:13,4:17:38.99:1944,39,0	1/1:10,11:21:63.19:3454,63,0	0/0:39,0:39:99:0,114,4333	1/1:10,4:14:33.06:1823,33,0	0/0:18,0:18:54.15:0,54,1528	0/0:9,0:9:21.05:0,21,479	0/0:50,0:50:99:0,141,4968	1/1:12,2:14:38.12:1370,38,0	1/1:6,2:8:24.07:1029,24,0	1/1:6,5:10:21.51:922,22,0	1/1:16,1:18:51.12:2057,51,0	0/0:25,0:25:72.20:0,72,1674	0/0:24,0:24:63.22:0,63,2613	1/1:1,4:5:15.05:1027,15,0
chr10	94536811	.	A	AAAG	5041.62	PASS	AB=0.813;AC=34;AF=0.607;AN=56;BaseQRankSum=-5.573;DP=541;FS=19.273;HRun=0;HaplotypeScore=100.3357;InbreedingCoeff=0.8062;MQ=63.03;MQ0=13;MQRankSum=-3.626;QD=15.19;ReadPosRankSum=4.362;VQSLOD=3.1180;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:38.83:0,39,465	1/1:0,10:10:20.99:360,21,0	0/0:13,0:8:23.74:0,24,199	0/0:23,0:18:34.49:0,34,317	1/1:9,8:21:27.15:435,27,0	1/1:5,0:16:9.03:136,9,0	1/1:8,0:28:9.02:129,9,0	1/1:13,19:33:60.06:788,60,0	1/1:8,7:15:14.92:276,15,0	0/0:21,0:21:39.07:0,39,452	0/0:18,0:18:48.04:0,48,509	1/1:2,0:15:12.03:181,12,0	0/1:4,0:10:5.87:71,0,6	1/1:6,0:16:6.02:92,6,0	1/1:4,14:23:36.10:612,36,0	1/1:9,10:18:24.07:454,24,0	0/0:41,0:38:80.36:0,80,932	1/1:9,17:29:43.83:772,44,0	0/0:21,0:19:45.04:0,45,476	0/0:23,0:23:53.44:0,53,575	0/0:6,0:6:14.01:0,14,126	1/1:2,0:12:14.57:164,15,0	1/1:4,0:15:3.01:45,3,0	1/1:2,0:20:15.05:229,15,0	1/1:8,2:21:15.04:241,15,0	0/1:19,0:19:0.28:0,0,302	0/0:15,0:15:26.32:0,26,248	1/1:0,3:4:3.01:56,3,0
chr10	94536814	.	G	GAAA	2931.99	PASS	AB=0.982;AC=24;AF=0.429;AN=56;BaseQRankSum=0.601;DP=481;FS=4.970;HRun=15;HaplotypeScore=99.7500;InbreedingCoeff=0.2873;MQ=70.42;MQ0=5;MQRankSum=-5.165;QD=11.06;ReadPosRankSum=5.699;VQSLOD=0.9922;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:38.91:0,39,601	1/1:10,0:10:18.46:225,18,0	0/0:17,0:12:27.07:0,27,358	0/0:23,0:18:29.30:0,29,551	0/1:18,2:20:0.61:240,0,1	1/1:9,0:8:9.01:88,9,0	0/1:21,1:22:33.91:104,0,34	0/1:33,0:32:54.58:306,0,55	1/1:9,3:12:14.92:270,15,0	0/0:19,0:19:45.04:0,45,669	0/0:17,0:17:48.06:0,48,660	0/1:13,0:13:9.95:93,0,10	0/1:9,0:9:1.41:49,0,1	0/1:14,0:14:19.36:57,0,19	0/1:23,0:23:10.90:380,0,11	1/1:15,0:15:3.11:304,3,0	0/0:31,0:31:84.16:0,84,1213	1/1:26,1:27:44.48:558,44,0	0/0:20,0:19:50.80:0,51,718	0/0:23,0:23:59.91:0,60,794	0/0:7,0:7:10:0,10,145	0/1:12,0:12:63.65:64,0,73	1/1:7,0:6:3.47:29,3,0	1/1:14,1:15:15.03:175,15,0	0/1:18,1:19:14.43:148,0,14	0/0:19,0:19:27.47:0,27,505	0/0:17,0:17:28.87:0,29,346	0/1:5,0:5:18.94:31,0,19
chr10	94537525	.	C	CT	1575.80	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.075;DP=701;FS=0.000;HRun=5;HaplotypeScore=112.4746;InbreedingCoeff=0.9999;MQ=85.76;MQ0=0;MQRankSum=-3.434;QD=32.16;ReadPosRankSum=2.096;VQSLOD=3.0429;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:66.21:868,66,0	0/0:21,0:21:60.15:0,60,645	0/0:21,0:21:57.10:0,57,594	0/0:23,0:23:39.99:0,40,500	0/0:28,0:28:75.19:0,75,806	0/0:26,0:26:72.18:0,72,774	0/0:20,0:20:57.11:0,57,596	0/0:17,0:17:42.10:0,42,451	0/0:31,0:31:78.17:0,78,829	0/0:22,0:22:63.15:0,63,672	0/0:23,0:23:63.16:0,63,676	0/0:21,0:21:60.15:0,60,645	0/0:30,0:30:87.22:0,87,935	0/0:34,0:34:96.21:0,96,1015	0/0:35,0:35:99:0,102,1096	0/0:21,0:21:57.11:0,57,596	1/1:1,22:23:63.20:829,63,0	0/0:25,0:25:75.17:0,75,797	0/0:18,0:18:51.12:0,51,540	0/0:28,0:28:78.15:0,78,813	0/0:31,0:31:90.22:0,90,967	0/0:22,0:22:60.15:0,60,644	0/0:20,0:20:54.13:0,54,580	0/0:16,0:16:48.12:0,48,516	0/0:34,0:34:93.22:0,93,992	0/0:28,0:28:72.18:0,72,774	0/0:38,0:37:99:0,105,1119	0/0:19,0:19:57.14:0,57,613
chr10	94539754	.	A	ATAGG	7298.54	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=9.127;DP=803;FS=37.151;HRun=0;HaplotypeScore=214.0524;InbreedingCoeff=0.8211;MQ=56.50;MQ0=3;MQRankSum=-5.657;QD=12.29;ReadPosRankSum=-0.997;VQSLOD=2.9195;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:35:5.97:52,6,0	1/1:17,0:17:21.53:351,22,0	0/0:30,0:21:2.92:0,3,17	0/0:23,0:18:17.96:0,18,214	1/1:18,0:16:2.94:48,3,0	1/1:27,0:27:30.93:287,31,0	1/1:28,0:26:18.33:179,18,0	1/1:18,0:18:18.03:257,18,0	1/1:35,0:34:30.02:430,30,0	1/1:40,0:38:48.15:1004,48,0	1/1:24,2:24:39.61:926,40,0	1/1:24,0:23:33.10:567,33,0	1/1:37,0:37:57.55:546,58,0	1/1:37,0:34:35.92:311,36,0	1/1:50,0:50:57.36:795,57,0	1/1:18,20:36:5.89:87,6,0	1/1:21,0:20:17.10:179,17,0	1/1:14,0:14:9.03:158,9,0	0/0:17,0:16:12.04:0,12,189	0/0:26,0:26:42.14:0,42,657	0/0:53,0:52:63.18:0,63,941	1/1:37,0:37:22.67:256,23,0	1/1:20,0:19:3.37:26,3,0	1/1:31,0:30:6.43:100,6,0	1/1:30,0:29:18.03:273,18,0	0/0:43,0:43:63.17:0,63,945	0/0:17,0:17:9.03:0,9,142	1/1:10,0:10:27.09:468,27,0
chr10	94539791	.	T	TA	4158.03	PASS	AB=0.756;AC=29;AF=0.518;AN=56;BaseQRankSum=12.254;DP=662;FS=8.955;HRun=1;HaplotypeScore=178.0159;InbreedingCoeff=0.1121;MQ=37.93;MQ0=34;MQRankSum=-4.927;QD=9.18;ReadPosRankSum=-3.902;VQSLOD=-0.6029;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,10:18:29.87:87,0,30	0/1:7,4:11:23.68:186,0,24	0/0:17,0:1:3.01:0,3,42	0/0:14,0:6:12.04:0,12,164	0/1:7,6:11:36.51:41,0,37	0/1:11,10:20:14.97:329,0,15	1/1:14,7:18:14.26:167,14,0	0/1:30,2:25:19.13:19,0,866	1/1:9,16:24:26.89:372,27,0	0/1:35,1:31:99:116,0,388	1/1:23,0:28:0.26:50,0,0	0/1:12,9:18:14.28:297,0,14	1/1:13,16:27:6.51:616,7,0	1/1:11,17:23:27.02:405,27,0	0/1:20,21:40:80.40:385,0,80	0/0:24,0:21:8.88:0,9,99	0/1:9,7:13:99:158,0,128	0/1:11,3:10:33.35:104,0,33	0/0:23,0:18:54.18:0,54,755	0/0:27,0:24:44.21:0,44,551	0/0:42,0:40:99:0,110,1550	1/1:14,11:23:15.04:215,15,0	0/1:8,7:15:34.01:40,0,34	1/1:8,6:12:5.86:89,6,0	1/1:14,8:20:12.02:125,12,0	0/0:36,0:36:99:0,102,1383	0/0:26,0:24:45.15:0,45,626	1/1:1,9:9:27.09:359,27,0
chr10	94539798	.	TA	T	707.10	PASS	AB=0.841;AC=14;AF=0.259;AN=54;BaseQRankSum=7.407;DP=642;FS=2.180;HRun=1;HaplotypeScore=177.2475;InbreedingCoeff=0.0898;MQ=35.82;MQ0=37;MQRankSum=-5.498;QD=3.02;ReadPosRankSum=-0.118;VQSLOD=-0.2767;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:20:2.51:3,0,46	1/1:3,4:7:6.02:71,6,0	0/0:14,0:1:3.01:0,3,47	0/0:10,0:2:2.99:0,3,23	0/0:7,5:10:2.71:0,3,48	0/1:19,1:19:11.30:11,0,42	0/0:21,0:18:0.95:0,1,17	0/0:26,0:19:57.16:0,57,836	1/1:9,11:19:10.79:144,11,0	0/1:29,10:33:99:122,0,213	0/0:23,12:31:14.83:0,15,100	0/1:11,9:16:80.60:91,0,81	0/1:27,0:25:36.65:37,0,45	0/0:28,0:23:7.26:0,7,27	0/1:19,16:34:21.98:22,0,131	0/0:21,1:19:9.02:0,9,120	0/1:10,4:11:55.21:55,0,201	0/1:11,3:10:39.10:59,0,39	0/0:25,0:20:56.20:0,56,819	0/0:28,0:25:42.60:0,43,628	0/0:42,0:39:99:0,102,1585	0/0:22,0:20:1.40:0,1,4	0/0:16,0:15:3.90:0,4,47	0/0:16,0:12:0.38:0,0,2	./.	0/0:36,0:36:94.10:0,94,1375	0/0:34,0:32:51.60:0,52,773	1/1:1,9:9:21.06:243,21,0
chr10	94539839	.	AGAT	A	2458.86	PASS	AB=0.987;AC=29;AF=0.580;AN=50;BaseQRankSum=5.338;DP=549;FS=2.026;HRun=0;HaplotypeScore=131.4400;InbreedingCoeff=-0.0104;MQ=33.66;MQ0=37;MQRankSum=-4.022;QD=6.13;ReadPosRankSum=-4.136;VQSLOD=1.7213;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:14:8.06:0,8,118	1/1:9,0:6:0.59:19,1,0	./.	./.	1/1:10,0:8:2.80:28,3,0	0/1:11,0:9:27.45:40,0,27	1/1:17,0:12:1.47:43,1,0	./.	0/0:16,0:14:1.81:0,2,6	0/1:38,0:30:64.76:779,0,65	1/1:30,0:25:1.66:43,2,0	0/1:16,0:11:71.63:80,0,72	1/1:15,0:11:6.02:76,6,0	0/1:19,0:12:29.78:99,0,30	0/0:21,0:20:15.05:0,15,209	0/1:21,1:18:45.48:61,0,45	0/0:14,0:10:12.04:0,12,153	0/1:16,0:10:62.73:208,0,63	0/0:20,0:15:44.93:0,45,565	0/1:34,3:33:88.10:144,0,88	0/0:46,0:41:74:0,74,1288	1/1:17,0:13:2.88:46,3,0	1/1:14,0:11:5.89:92,6,0	1/1:17,0:13:3.96:86,4,0	1/1:18,1:17:12.03:143,12,0	0/1:33,0:32:99:452,0,537	0/1:48,0:42:99:165,0,623	1/1:13,0:12:3.58:10,4,0
chr10	94539911	.	G	GACACACACACACAC	590.24	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.516;DP=712;FS=4.281;HRun=0;HaplotypeScore=327.1206;InbreedingCoeff=0.7950;MQ=55.86;MQ0=13;MQRankSum=-4.276;QD=19.04;ReadPosRankSum=-4.031;VQSLOD=1.4365;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,8:18:5.05:210,5,0	0/0:15,0:13:27.02:0,27,982	0/0:29,0:20:54.02:0,54,1407	0/0:27,0:24:25.84:0,26,957	0/0:16,0:16:45.15:0,45,1565	0/0:13,0:12:36.11:0,36,1120	0/0:29,0:29:44.93:0,45,1010	0/0:27,0:26:1.38:0,1,1528	0/0:29,0:29:63.17:0,63,1927	0/0:29,0:27:60.17:0,60,1690	0/0:14,0:11:18.06:0,18,578	0/0:25,0:25:50.66:0,51,1536	0/0:27,0:27:51.15:0,51,1550	0/0:31,0:28:54.56:0,55,1496	0/0:35,0:35:84.29:0,84,2858	0/0:32,0:31:60.18:0,60,1899	1/1:12,0:12:18.03:488,18,0	0/0:22,0:22:45.06:0,45,1387	0/0:19,0:16:26.19:0,26,719	0/0:23,0:21:8.92:0,9,1073	0/0:46,0:41:82.62:0,83,2330	0/0:23,0:21:46.87:0,47,1411	0/0:15,0:14:24.08:0,24,616	0/0:31,0:30:66.20:0,66,1990	0/0:40,0:39:99:0,110,3298	0/0:31,0:30:50.22:0,50,1738	0/0:33,0:28:41.48:0,41,1437	0/0:17,0:17:39.13:0,39,1509
chr10	94539923	.	CAT	C	5670.25	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=5.801;DP=727;FS=1.559;HRun=0;HaplotypeScore=152.2836;InbreedingCoeff=0.9678;MQ=64.49;MQ0=7;MQRankSum=0.765;QD=28.49;ReadPosRankSum=2.207;VQSLOD=6.1407;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:6:0,6,57	0/0:12,0:12:30.09:0,30,511	0/0:29,1:27:78.22:0,78,1175	0/0:27,0:26:27.88:0,28,818	0/0:20,0:20:57.10:0,57,884	0/0:18,0:18:45.11:0,45,725	0/0:29,0:29:48.02:0,48,690	0/0:33,0:33:87.04:0,87,1136	0/0:25,0:25:69.21:0,69,1200	1/1:1,31:31:87.09:1073,87,0	1/1:7,10:14:27.05:331,27,0	0/0:24,0:24:54.17:0,54,947	0/0:26,0:26:60.12:0,60,1012	0/0:28,0:27:60.06:0,60,1035	0/0:40,0:39:91.76:0,92,1560	0/0:25,0:25:66.21:0,66,1170	0/0:13,0:12:7.97:0,8,223	0/0:22,0:22:45.13:0,45,774	1/1:2,17:17:48.06:587,48,0	1/1:6,15:19:39.60:556,40,0	1/1:3,42:43:77.64:1128,78,0	0/0:27,0:27:69.09:0,69,1011	0/0:16,0:15:32.70:0,33,518	0/0:33,0:33:78.21:0,78,1298	0/0:43,0:43:99:0,126,2096	1/1:1,35:35:99:1270,99,0	1/1:6,23:25:51.04:726,51,0	0/0:18,0:18:45.12:0,45,760
chr10	94541544	.	A	AG	1772.38	PASS	AB=0.969;AC=14;AF=0.269;AN=52;BaseQRankSum=15.353;DP=610;FS=2.081;HRun=4;HaplotypeScore=68.2142;InbreedingCoeff=0.8382;MQ=51.49;MQ0=24;MQRankSum=0.745;QD=9.74;ReadPosRankSum=1.134;VQSLOD=0.5796;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:98.15:0,98,1232	0/0:8,0:8:24.07:0,24,272	./.	./.	0/0:23,0:23:54.97:0,55,649	1/1:18,1:19:28.31:254,28,0	1/1:30,0:30:33.09:246,33,0	0/0:32,0:25:66.17:0,66,733	0/0:18,0:18:50.98:0,51,532	0/0:20,0:20:57.16:0,57,639	0/0:20,0:19:51.07:0,51,550	1/1:18,0:18:46.17:260,46,0	0/1:28,0:28:1.14:266,0,1	1/1:28,0:28:24.36:306,24,0	0/0:31,0:31:84.02:0,84,881	0/0:22,0:22:66.10:0,66,718	0/0:20,0:20:54.03:0,54,560	0/0:19,0:19:51.13:0,51,567	0/0:19,0:16:48.14:0,48,541	0/0:25,0:24:66.17:0,66,730	0/0:22,0:22:51.13:0,51,570	0/1:14,1:14:14.16:164,0,14	1/1:13,2:15:8.94:169,9,0	1/1:29,0:29:15.32:290,15,0	0/0:18,0:18:48.12:0,48,531	0/0:25,0:24:63.18:0,63,714	0/0:23,0:23:66.06:0,66,704	0/0:14,0:14:39.11:0,39,442
chr10	94541548	.	G	GT	5433.87	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-3.857;DP=618;FS=0.360;HRun=6;HaplotypeScore=56.8126;InbreedingCoeff=0.9429;MQ=51.63;MQ0=25;MQRankSum=1.232;QD=29.37;ReadPosRankSum=0.073;VQSLOD=5.2255;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,114,1128	0/0:8,0:8:24.05:0,24,244	0/0:14,0:2:2.94:0,3,18	0/0:17,0:3:2.80:0,3,13	0/0:22,0:22:60.04:0,60,596	1/1:3,17:20:51.16:630,51,0	1/1:1,29:30:60.19:755,60,0	0/0:31,0:24:72.11:0,72,711	0/0:18,0:18:42.09:0,42,427	0/0:20,0:20:57.11:0,57,574	0/0:19,0:18:51.11:0,51,517	1/1:2,18:20:48.15:604,48,0	1/1:5,23:28:63.20:781,63,0	1/1:1,26:27:69.22:861,69,0	0/0:30,0:30:75.07:0,75,748	0/0:22,0:22:63.13:0,63,639	0/0:19,0:19:42.06:0,42,419	0/0:19,0:19:54.10:0,54,542	0/0:21,0:18:54.04:0,54,524	0/0:28,0:27:69.12:0,69,694	0/0:20,0:20:48.11:0,48,489	1/1:4,10:15:33.10:410,33,0	1/1:3,13:16:37.30:435,37,0	1/1:4,25:29:78.19:958,78,0	0/0:18,0:18:45.10:0,45,459	0/0:25,0:24:69.14:0,69,692	0/0:25,0:25:68.93:0,69,661	0/0:13,0:13:39.09:0,39,397
chr10	94541807	.	TACACACACACACACACAC	T	1439.59	PASS	AB=0.759;AC=13;AF=0.250;AN=52;BaseQRankSum=1.615;DP=515;FS=6.444;HRun=0;HaplotypeScore=212.9271;InbreedingCoeff=0.6337;MQ=55.69;MQ0=22;MQRankSum=0.364;QD=11.34;ReadPosRankSum=1.939;VQSLOD=1.8141;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:26.94:0,27,410	0/0:8,0:11:18.06:0,18,656	./.	./.	0/0:17,0:23:21.03:0,21,652	0/0:6,0:11:7.08:0,7,84	0/0:19,0:18:21.03:0,21,468	0/0:28,0:26:10.28:0,10,216	0/0:9,0:14:6.02:0,6,266	1/1:13,9:21:15.92:479,16,0	1/1:5,5:9:3.01:290,3,0	0/0:20,0:20:12.04:0,12,446	0/0:13,0:13:9.03:0,9,462	0/0:23,0:23:14.98:0,15,519	0/0:13,0:14:7.75:0,8,328	0/0:9,0:13:27.03:0,27,909	0/0:17,0:16:10.64:0,11,88	0/0:12,0:13:15.05:0,15,491	1/1:11,0:11:2.12:23,2,0	1/1:7,11:18:3.01:38,3,0	1/1:22,0:20:16.43:202,16,0	0/0:19,0:16:14.99:0,15,459	0/0:18,0:18:9.03:0,9,462	0/0:21,0:33:6.02:0,6,207	0/0:10,0:16:5.91:0,6,164	0/1:15,0:22:11.23:131,0,11	1/1:12,10:20:8.99:434,9,0	0/0:12,0:11:18.06:0,18,861
chr10	94541859	.	C	CACACAGAG	3942.87	PASS	AB=0.946;AC=33;AF=0.611;AN=54;BaseQRankSum=-1.727;DP=647;FS=16.985;HRun=0;HaplotypeScore=182.2457;InbreedingCoeff=0.1686;MQ=62.37;MQ0=28;MQRankSum=0.418;QD=8.61;ReadPosRankSum=2.858;VQSLOD=1.4282;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:31:1.25:2,0,1	0/0:6,0:7:4.86:0,5,24	0/0:43,0:21:63.18:0,63,1010	0/0:54,0:28:43.02:0,43,975	0/0:17,0:16:1.51:0,2,44	1/1:12,0:13:12.04:199,12,0	./.	1/1:34,0:33:81.15:1134,81,0	0/0:23,0:22:9.02:0,9,51	0/1:15,0:14:32.02:32,0,102	1/1:9,0:7:0.93:2,1,0	1/1:18,0:17:26.99:436,27,0	0/1:1,14:19:7.29:157,0,7	1/1:5,16:28:6.02:239,6,0	0/1:25,0:25:29.77:47,0,30	0/1:23,0:23:34.65:35,0,131	0/1:27,0:26:22.56:23,0,40	0/1:24,0:24:19.21:25,0,19	1/1:16,0:15:5.21:28,5,0	0/1:21,0:21:0.89:1,0,1	1/1:24,0:21:0.48:3,0,0	1/1:8,0:20:2.90:106,3,0	1/1:6,0:20:8.83:159,9,0	1/1:36,0:36:60.52:979,61,0	0/0:14,0:14:2.11:0,2,49	1/1:16,0:15:4.68:12,5,0	0/1:20,0:20:10.67:11,0,108	1/1:11,0:10:2.61:313,3,0
chr10	94542342	.	ATGTGTGTG	A	4244.02	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=5.371;DP=532;FS=1.358;HRun=0;HaplotypeScore=152.5623;InbreedingCoeff=0.7155;MQ=57.23;MQ0=8;MQRankSum=-4.348;QD=30.31;ReadPosRankSum=1.840;VQSLOD=4.7046;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:6.49:0,6,184	0/0:6,0:6:3.01:0,3,48	0/0:22,0:13:3.01:0,3,111	0/0:25,0:17:15.05:0,15,520	0/0:16,0:16:9.02:0,9,248	0/0:17,0:17:12.04:0,12,319	0/0:22,0:22:11.25:0,11,278	0/0:34,0:30:48.14:0,48,1271	0/0:20,0:19:6.89:0,7,70	1/1:9,20:29:54.18:1274,54,0	1/1:2,10:15:33.08:724,33,0	0/0:17,0:16:9.03:0,9,235	0/0:17,0:16:12.04:0,12,292	./.	0/0:38,0:38:27.09:0,27,752	0/0:17,0:17:6.02:0,6,137	0/0:0,0:17:21.07:0,21,727	0/0:9,0:8:12.04:0,12,342	1/1:13,6:19:15.03:293,15,0	1/1:6,10:15:27.09:650,27,0	1/1:18,6:24:3.01:77,3,0	0/0:13,0:13:6.02:0,6,172	0/0:14,0:14:6.02:0,6,207	0/0:21,0:20:3.25:0,3,104	0/0:19,0:19:6.02:0,6,221	1/1:11,11:22:36.10:845,36,0	1/1:8,6:14:14.25:382,14,0	0/0:5,0:4:5.98:0,6,110
chr10	94543210	.	TGAAC	T	1775.47	PASS	AC=14;AF=0.636;AN=22;BaseQRankSum=1.421;DP=261;FS=0.000;HRun=0;HaplotypeScore=48.8905;InbreedingCoeff=0.8597;MQ=20.35;MQ0=154;MQRankSum=-1.434;QD=22.19;ReadPosRankSum=-1.914;VQSLOD=2.2767;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,5:6:11.99:218,12,0	./.	./.	1/1:0,20:18:24.04:401,24,0	./.	./.	1/1:2,3:2:6.02:109,6,0	./.	0/0:14,0:6:15.05:0,15,289	0/0:15,0:13:21.07:0,21,437	./.	./.	./.	./.	./.	./.	./.	./.	0/0:18,0:16:36.12:0,36,927	./.	1/1:2,9:8:15.01:238,15,0	1/1:1,10:9:21.03:347,21,0	./.	1/1:2,19:16:32.89:529,33,0	0/0:13,0:4:12.04:0,12,314	./.	1/1:0,5:3:3.01:55,3,0
chr10	94543267	.	T	TACACAC	302.86	PASS	AB=1.000;AC=9;AF=0.643;AN=14;DP=202;FS=0.000;HRun=0;HaplotypeScore=98.8745;MQ=20.76;MQ0=100;QD=6.73;VQSLOD=1.7103;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:9,2:10:9.03:203,9,0	./.	./.	0/0:17,4:17:0.47:0,0,1	./.	./.	./.	./.	1/1:7,0:2:3.01:78,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/1:9,0:9:0:0,0,0	./.	./.	1/1:16,0:12:1.99:6,2,0	./.	0/0:16,3:18:0.26:0,0,1	./.	./.	1/1:2,0:1:3.01:84,3,0
chr10	94543288	.	A	ACACACACT	193.80	PASS	AB=0.956;AC=9;AF=0.563;AN=16;BaseQRankSum=1.000;DP=151;FS=0.000;HRun=0;HaplotypeScore=62.0507;MQ=30.96;MQ0=43;MQRankSum=0.135;QD=3.08;ReadPosRankSum=1.134;VQSLOD=1.2829;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:9,0:8:8.92:127,9,0	1/1:13,0:1:0.47:1,0,0	./.	0/1:18,0:13:0:0,0,0	./.	./.	0/1:6,0:3:11.01:31,0,11	./.	0/0:5,0:4:11.84:0,12,80	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/1:11,1:11:0:0,0,0	./.	0/0:15,0:14:0.13:0,0,1	./.	./.	1/1:4,0:3:6.01:113,6,0
chr10	94543342	.	A	AT	515.87	PASS	AC=10;AF=0.263;AN=38;BaseQRankSum=2.815;DP=263;FS=5.229;HRun=0;HaplotypeScore=41.8068;InbreedingCoeff=0.6007;MQ=21.24;MQ0=155;MQRankSum=-0.315;QD=12.90;ReadPosRankSum=-1.282;VQSLOD=3.4427;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:3:3.01:0,3,42	1/1:0,5:3:9.03:142,9,0	./.	./.	1/1:2,11:10:14.47:138,14,0	0/0:10,0:5:9.03:0,9,125	0/0:9,0:2:5.93:0,6,40	./.	1/1:1,5:2:6.02:94,6,0	0/0:14,0:8:21.07:0,21,293	0/0:9,0:7:8.99:0,9,104	0/0:12,0:6:3.01:0,3,42	0/0:12,0:5:5.99:0,6,84	./.	./.	1/1:0,5:2:3.01:48,3,0	./.	./.	./.	0/0:10,0:10:23.99:0,24,291	./.	0/0:9,0:5:5.98:0,6,62	0/0:11,0:4:2.97:0,3,20	0/0:9,0:1:3.01:0,3,42	1/1:2,9:11:19.14:227,19,0	0/0:10,0:5:15.03:0,15,191	0/0:8,0:8:14.61:0,15,209	0/0:4,0:3:3.01:0,3,42
chr10	94543683	.	T	TA	3555.14	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-6.691;DP=582;FS=9.262;HRun=7;HaplotypeScore=59.6468;InbreedingCoeff=0.9953;MQ=70.08;MQ0=0;MQRankSum=0.358;QD=27.14;ReadPosRankSum=3.730;VQSLOD=4.1322;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,123,1171	1/1:4,6:10:18.05:214,18,0	0/0:10,0:10:18:0,18,168	0/0:11,0:11:26.80:0,27,225	1/1:2,23:25:57.08:659,57,0	0/0:15,0:15:35.99:0,36,332	0/0:26,0:26:66.10:0,66,637	0/0:31,0:31:69.07:0,69,654	1/1:2,13:15:39.12:471,39,0	0/0:21,0:21:60.09:0,60,579	0/0:21,0:20:51.07:0,51,492	0/0:19,0:19:57.05:0,57,542	0/0:17,0:17:48.08:0,48,463	0/0:13,0:13:39.03:0,39,368	1/1:6,13:20:39.05:453,39,0	1/1:1,19:20:57.07:654,57,0	0/0:38,0:38:99:0,99,928	1/1:1,18:19:48.15:580,48,0	0/0:14,0:14:36.02:0,36,334	0/0:25,0:25:75.07:0,75,705	0/0:21,0:21:57.09:0,57,550	0/0:19,0:18:50.90:0,51,460	0/0:15,0:15:45.01:0,45,423	0/0:35,0:35:96.13:0,96,921	1/1:5,17:22:45.07:525,45,0	0/0:20,0:20:51.06:0,51,483	0/0:28,0:28:81.09:0,81,773	0/0:7,0:7:18.01:0,18,167
chr10	94543934	.	GTTGT	G	8607.82	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=0.111;DP=725;FS=1.886;HRun=0;HaplotypeScore=154.3622;InbreedingCoeff=0.9641;MQ=66.16;MQ0=2;MQRankSum=11.534;QD=20.84;ReadPosRankSum=3.355;VQSLOD=4.9386;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:60.55:0,61,774	1/1:9,7:16:21.07:333,21,0	0/0:25,0:20:9.03:0,9,215	0/0:27,0:18:3.48:0,3,72	1/1:6,15:21:30.06:437,30,0	0/0:10,0:15:33.11:0,33,596	0/0:28,0:28:39.13:0,39,764	1/1:20,0:30:19.06:115,19,0	1/1:9,19:28:45.15:712,45,0	1/1:13,12:25:36.07:521,36,0	1/1:8,14:22:36.12:559,36,0	0/0:17,0:24:36.59:0,37,678	0/0:23,0:26:45.14:0,45,899	0/0:23,0:31:33.11:0,33,639	1/1:11,20:31:57.19:902,57,0	1/1:10,18:28:36.12:570,36,0	0/0:28,0:28:30.57:0,31,436	1/1:6,12:18:36.12:570,36,0	1/1:16,9:24:26.99:400,27,0	1/1:10,15:25:39.13:617,39,0	1/1:24,16:40:39.13:617,39,0	0/0:16,0:24:48.16:0,48,856	0/0:17,0:21:27.09:0,27,473	0/0:19,0:23:15.92:0,16,246	1/1:8,13:21:36.08:542,36,0	1/1:17,12:29:36.12:567,36,0	1/1:18,23:42:63.02:978,63,0	1/1:5,0:11:18.02:168,18,0
chr10	94543938	.	T	TTGGTTGG	4802.16	PASS	AB=0.985;AC=11;AF=0.196;AN=56;BaseQRankSum=10.316;DP=714;FS=11.127;HRun=0;HaplotypeScore=230.0427;InbreedingCoeff=-0.0148;MQ=65.56;MQ0=3;MQRankSum=-11.555;QD=18.69;ReadPosRankSum=0.117;VQSLOD=3.1015;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,7:41:99:2005,106,0	0/0:18,0:18:45.15:0,45,951	0/0:25,0:20:56.81:0,57,1085	0/0:26,0:17:39.50:0,39,741	0/0:22,0:22:12.82:0,13,864	0/1:15,0:15:99:277,0,450	0/1:25,0:25:99:239,0,961	0/0:28,0:28:64.40:0,64,1379	0/0:27,0:27:69.21:0,69,1328	0/0:25,0:25:72.24:0,72,1511	0/0:20,0:20:57.08:0,57,1031	0/1:24,0:24:99:325,0,778	0/1:29,0:29:99:241,0,1113	0/1:28,0:28:99:156,0,1022	0/0:31,0:31:87.01:0,87,1611	0/0:25,0:25:57.20:0,57,1186	0/1:22,0:26:14.84:972,0,15	0/0:18,0:18:48.15:0,48,895	0/0:26,0:25:24.61:0,25,1045	0/0:25,0:25:64.40:0,64,1227	0/0:42,0:42:99:0,106,1940	0/1:24,0:24:99:346,0,726	0/1:22,0:22:99:140,0,915	0/1:22,0:22:99:102,0,702	0/0:20,0:20:54.18:0,54,1066	0/0:27,0:27:55.89:0,56,1353	0/0:41,0:41:99:0,112,2197	0/0:11,0:10:27.06:0,27,454
chr10	94544507	.	A	ATATG	9021.66	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-12.026;DP=776;FS=16.019;HRun=0;HaplotypeScore=124.5984;InbreedingCoeff=1.0000;MQ=85.77;MQ0=1;MQRankSum=-3.259;QD=62.22;ReadPosRankSum=1.458;VQSLOD=6.1615;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,144,2457	0/0:16,0:16:48.16:0,48,895	0/0:39,0:39:99:0,102,1767	0/0:20,0:20:43.93:0,44,753	0/0:25,0:25:60.19:0,60,1088	0/0:19,0:19:54.17:0,54,977	0/0:26,0:26:75.24:0,75,1367	0/0:36,0:36:93.30:0,93,1670	0/0:28,0:28:84.25:0,84,1503	0/0:30,0:30:84.28:0,84,1515	0/0:26,0:25:63.22:0,63,1175	0/0:26,0:26:75.23:0,75,1337	0/0:27,0:27:72.22:0,72,1278	0/0:26,0:26:72.25:0,72,1343	0/0:29,0:29:78.25:0,78,1423	0/0:25,0:25:63.22:0,63,1167	0/0:38,0:38:99:0,108,1901	0/0:21,0:21:57.16:0,57,1000	1/1:11,12:23:54.18:1423,54,0	1/1:6,20:25:48.16:1278,48,0	1/1:3,27:30:63.22:1680,63,0	0/0:28,0:28:78.24:0,78,1393	0/0:27,0:27:78.16:0,78,1292	0/0:21,0:21:57.16:0,57,990	0/0:23,0:23:63.20:0,63,1135	1/1:7,24:31:37.36:2108,37,0	1/1:1,33:35:96.33:2533,96,0	0/0:20,0:20:48.16:0,48,895
chr10	94544809	.	TCACACACACACACACCTCACACAGACACACACACACACAC	T	307	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=0.542;DP=652;FS=0.000;HRun=0;HaplotypeScore=533.4381;InbreedingCoeff=0.4762;MQ=61.53;MQ0=17;MQRankSum=-3.007;QD=6.14;ReadPosRankSum=0.831;VQSLOD=0.1609;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,20:28:3.01:293,3,0	0/0:8,0:8:18.06:0,18,2103	0/0:53,0:30:46.52:0,47,983	0/0:52,0:24:33.06:0,33,657	0/0:21,0:22:33.02:0,33,2195	0/0:10,0:10:19.98:0,20,995	0/0:28,0:27:57.17:0,57,3252	0/0:18,0:18:36.12:0,36,1623	0/0:17,0:17:36.10:0,36,2656	0/0:21,0:21:42.14:0,42,4919	0/0:11,0:11:30.10:0,30,2346	0/0:10,0:10:18.06:0,18,1866	0/0:15,0:15:30.06:0,30,1491	0/0:16,0:16:30.10:0,30,2302	0/0:20,0:20:36.02:0,36,1839	0/0:21,0:20:45.15:0,45,4546	0/1:17,0:17:17.14:106,0,17	0/0:29,0:29:75.26:0,75,6006	0/0:20,0:20:33.08:0,33,1842	0/0:17,0:17:39.13:0,39,3600	0/0:55,0:55:99:0,132,14709	0/0:27,0:27:60.19:0,60,3701	0/0:15,0:14:33.11:0,33,1721	0/0:35,0:34:78.95:0,79,5395	0/0:21,0:21:37.85:0,38,3077	0/0:25,0:25:69.24:0,69,5938	0/0:18,0:17:36.12:0,36,3766	0/0:15,0:15:42.14:0,42,3553
chr10	94544823	.	ACCT	A	104.96	PASS	AB=0.900;AC=5;AF=0.089;AN=56;BaseQRankSum=4.690;DP=700;FS=8.726;HRun=0;HaplotypeScore=127.4772;InbreedingCoeff=0.6434;MQ=52.82;MQ0=42;MQRankSum=-4.409;QD=2.19;ReadPosRankSum=-0.613;VQSLOD=1.9419;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:20:2.80:13,3,0	0/1:8,1:9:50.15:50,0,381	0/0:85,0:22:54.92:0,55,1005	0/0:74,0:17:39.09:0,39,656	0/0:18,1:19:38.93:0,39,747	0/0:11,0:11:24.04:0,24,507	0/0:29,0:27:55.98:0,56,1213	0/0:20,0:19:53.55:0,54,1122	0/0:16,0:15:23.41:0,23,749	0/0:20,0:20:54.19:0,54,1230	0/0:14,0:14:39.13:0,39,905	0/0:9,0:9:18.04:0,18,377	0/0:13,0:13:35.98:0,36,696	0/0:14,0:14:32.13:0,32,632	0/0:19,0:19:18.35:0,18,752	0/0:18,0:17:46.40:0,46,992	1/1:0,14:14:9.03:149,9,0	0/0:29,1:30:81.23:0,81,1736	0/0:14,0:14:42.11:0,42,856	0/0:18,0:18:45.03:0,45,1015	0/0:65,0:65:99:0,175,3718	0/0:31,0:30:50.55:0,51,1242	0/0:15,0:13:33.11:0,33,771	0/0:35,0:33:77.49:0,77,1535	0/0:17,4:21:35.66:0,36,795	0/0:27,0:27:81.27:0,81,1818	0/0:16,0:15:45.05:0,45,966	0/0:15,0:15:45.02:0,45,896
chr10	94544831	.	CAG	C	624.84	PASS	AB=0.982;AC=16;AF=0.286;AN=56;BaseQRankSum=9.135;DP=727;FS=14.144;HRun=0;HaplotypeScore=117.3240;InbreedingCoeff=0.2045;MQ=49.01;MQ0=64;MQRankSum=-1.266;QD=2.60;ReadPosRankSum=2.573;VQSLOD=1.5543;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:20:2.22:7,2,0	0/0:9,0:9:1.97:0,2,266	0/0:82,0:14:5.28:0,5,340	0/0:76,0:13:13.30:0,13,226	0/0:21,0:21:35.48:0,35,474	0/1:13,0:11:38.18:38,0,49	0/1:31,1:29:84.35:84,0,105	0/1:23,0:21:99:107,0,108	0/0:14,0:13:35.57:0,36,496	0/0:29,0:26:57.95:0,58,1064	0/0:15,0:15:42.06:0,42,599	0/1:10,1:9:11.17:38,0,11	0/1:12,0:12:56.15:56,0,65	1/1:13,0:11:9.86:98,10,0	0/0:16,0:16:21.77:0,22,328	0/0:18,0:17:28.03:0,28,647	1/1:12,0:11:5.74:30,6,0	0/0:33,0:31:70.02:0,70,1083	0/0:18,0:16:42.44:0,42,523	0/0:20,0:20:30.12:0,30,660	0/0:69,0:67:99:0,125,2602	0/1:30,1:28:86.93:117,0,87	0/1:18,0:13:1.95:2,0,125	0/1:34,0:31:66.36:66,0,108	0/0:24,0:24:32.91:0,33,486	0/0:27,0:27:62.07:0,62,1082	0/0:15,0:14:41.86:0,42,572	1/1:14,1:14:12.91:144,13,0
chr10	94544833	.	GAC	G	2186.58	PASS	AB=0.975;AC=19;AF=0.339;AN=56;BaseQRankSum=-0.356;DP=744;FS=0.000;HRun=0;HaplotypeScore=114.7066;InbreedingCoeff=0.7305;MQ=48.38;MQ0=67;MQRankSum=-1.263;QD=9.34;ReadPosRankSum=1.905;VQSLOD=3.3299;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:20:1.82:5,2,0	0/0:9,0:9:17.50:0,18,247	0/0:83,0:13:15.04:0,15,192	0/0:79,0:11:12.04:0,12,176	0/0:23,0:23:26.45:0,26,297	0/1:13,0:11:4.31:80,0,4	1/1:32,1:30:10.41:312,10,0	0/1:23,2:22:6.05:379,0,6	0/0:14,0:13:27.07:0,27,357	0/0:31,0:28:46.36:0,46,933	0/0:17,0:17:33.09:0,33,431	1/1:9,2:9:15.03:162,15,0	0/1:12,0:12:1.15:125,0,1	1/1:14,0:12:13.27:193,13,0	0/0:16,0:16:17.81:0,18,228	0/0:17,0:16:4.26:0,4,479	0/0:11,0:10:0.89:0,1,2	0/0:35,0:32:56.61:0,57,772	0/0:17,0:15:34.89:0,35,451	0/0:21,0:20:44.71:0,45,631	0/0:70,0:68:99:0,162,2268	1/1:31,0:28:26.57:357,27,0	1/1:19,0:14:11.91:118,12,0	1/1:35,0:32:13.10:353,13,0	0/0:24,0:24:13.10:0,13,293	0/0:27,0:27:50.17:0,50,729	0/0:16,0:15:35.59:0,36,481	1/1:15,0:14:35.03:294,35,0
chr10	94546488	.	TG	T	2396.18	PASS	AB=1.000;AC=5;AF=0.093;AN=54;BaseQRankSum=5.485;DP=574;FS=2.179;HRun=3;HaplotypeScore=78.6797;InbreedingCoeff=0.8557;MQ=54.51;MQ0=15;MQRankSum=6.029;QD=28.19;ReadPosRankSum=1.316;VQSLOD=2.9898;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,45:47:99:1553,126,0	0/0:11,0:11:24.08:0,24,345	./.	0/1:7,0:4:0.93:1,0,60	0/0:14,0:14:27.09:0,27,387	0/0:30,0:29:81.23:0,81,1148	0/0:32,0:29:83.95:0,84,1158	0/0:18,0:17:41.64:0,42,603	0/0:11,0:11:30.08:0,30,412	0/0:29,0:28:81.27:0,81,1157	0/0:22,0:22:63.08:0,63,843	0/0:23,0:23:69.22:0,69,972	0/0:15,0:15:45.15:0,45,648	0/0:13,0:13:36.12:0,36,516	0/0:11,0:11:27.09:0,27,388	0/0:22,0:22:57.19:0,57,815	1/1:2,28:30:43.84:964,44,0	0/0:21,0:21:57.13:0,57,771	0/0:20,0:20:60.20:0,60,847	0/0:22,0:22:66.22:0,66,949	0/0:22,0:21:63.21:0,63,906	0/0:24,0:23:69.22:0,69,973	0/0:20,0:19:57:0,57,762	0/0:32,0:32:93.31:0,93,1339	0/0:10,0:9:18.06:0,18,259	0/0:29,0:29:84.26:0,84,1173	0/0:30,0:30:90.30:0,90,1294	0/0:5,0:5:15.05:0,15,216
chr10	94546510	.	AAAAAAAG	A	4071.75	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.823;DP=581;FS=9.945;HRun=0;HaplotypeScore=147.3696;InbreedingCoeff=0.9878;MQ=58.07;MQ0=14;MQRankSum=-12.291;QD=38.05;ReadPosRankSum=1.283;VQSLOD=3.1480;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,126,4543	1/1:2,8:10:15.02:300,15,0	0/0:10,0:5:15.05:0,15,466	0/0:14,0:10:24.55:0,25,758	1/1:2,14:16:27.01:527,27,0	0/0:28,0:27:69.24:0,69,2554	0/0:28,0:26:63.01:0,63,2271	0/0:17,0:16:36.12:0,36,1230	1/1:1,9:10:24.04:508,24,0	0/0:29,0:28:69.24:0,69,2372	0/0:21,0:21:45.15:0,45,1552	0/0:22,0:22:66.20:0,66,2208	0/0:18,0:18:45.14:0,45,1522	0/0:9,0:9:24.08:0,24,877	1/1:5,10:15:21.07:488,21,0	1/1:3,18:21:42.14:976,42,0	0/0:29,0:29:69.24:0,69,2492	1/1:6,17:23:41.81:975,42,0	0/0:25,0:25:60.21:0,60,2164	0/0:24,0:24:51.18:0,51,1807	0/0:19,0:18:48.16:0,48,1737	0/0:24,0:23:60.21:0,60,2141	0/0:20,0:19:57.18:0,57,1947	0/0:32,0:32:78.27:0,78,2819	1/1:3,9:11:15.01:299,15,0	0/0:25,0:25:51.18:0,51,1895	0/0:27,0:27:66.23:0,66,2392	0/0:6,0:6:18.06:0,18,667
chr10	94546801	.	AT	A	17047.57	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.133;DP=582;FS=5.770;HRun=3;HaplotypeScore=59.9403;InbreedingCoeff=0.9746;MQ=84.22;MQ0=0;MQRankSum=-9.275;QD=31.34;ReadPosRankSum=4.329;VQSLOD=4.8009;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:78.25:966,78,0	1/1:0,4:4:12.04:148,12,0	0/0:23,0:23:20.62:0,21,729	0/0:15,0:14:36.11:0,36,474	1/1:0,19:19:33.10:409,33,0	1/1:1,21:22:60.19:744,60,0	1/1:1,23:24:60.19:744,60,0	1/1:0,14:14:39.12:483,39,0	1/1:0,19:19:45.14:558,45,0	1/1:0,17:17:51.14:617,51,0	1/1:0,8:8:18.06:223,18,0	1/1:0,24:24:60.19:744,60,0	1/1:2,20:22:48.15:594,48,0	1/1:2,16:18:42.13:521,42,0	1/1:0,17:17:45.14:558,45,0	1/1:0,20:20:54.17:669,54,0	1/1:1,39:40:96.30:1190,96,0	1/1:1,34:35:93.29:1153,93,0	1/1:0,16:16:45.03:486,45,0	1/1:1,10:11:24.07:297,24,0	1/1:0,47:47:99:1450,117,0	1/1:1,10:11:23.87:297,24,0	1/1:0,12:12:27.08:334,27,0	1/1:0,36:36:99:1223,99,0	1/1:1,14:15:36.11:446,36,0	1/1:0,26:26:75.24:929,75,0	1/1:1,26:27:75.24:930,75,0	1/1:0,9:9:27.08:335,27,0
chr10	94547677	.	TA	T	14690.26	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=14.025;DP=746;FS=0.000;HRun=5;HaplotypeScore=73.0017;InbreedingCoeff=0.9997;MQ=69.76;MQ0=0;MQRankSum=-2.630;QD=29.68;ReadPosRankSum=2.882;VQSLOD=5.3679;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,48:49:99:1361,120,0	1/1:0,14:14:39.11:442,39,0	0/0:20,0:20:28.96:0,29,521	0/0:15,0:15:30.10:0,30,393	1/1:3,40:43:99:1325,117,0	1/1:2,21:23:60.17:681,60,0	1/1:0,24:24:60.17:681,60,0	1/1:0,27:27:81.22:909,81,0	1/1:3,36:39:99:1123,99,0	0/0:39,0:39:99:0,108,1476	0/0:26,0:26:75.22:0,75,998	1/1:3,26:29:60.17:681,60,0	1/1:0,20:20:51.15:579,51,0	1/1:2,18:20:54.15:613,54,0	1/1:0,27:27:75.21:851,75,0	1/1:1,21:22:63.18:715,63,0	1/1:1,23:24:60.17:681,60,0	1/1:0,14:14:36.10:408,36,0	0/0:28,0:28:78.22:0,78,1041	0/0:34,0:34:87.29:0,87,1190	0/0:30,0:30:78.26:0,78,1067	1/1:2,37:39:99:1225,108,0	1/1:1,20:21:57.13:647,57,0	1/1:2,24:26:69.20:782,69,0	1/1:0,21:21:54.15:613,54,0	0/0:31,0:31:90.29:0,90,1216	0/0:27,0:27:75.24:0,75,1010	1/1:0,13:13:33.09:374,33,0
chr10	94547997	.	GAT	G	6772.53	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.225;DP=937;FS=11.540;HRun=0;HaplotypeScore=134.2151;InbreedingCoeff=0.9996;MQ=62.79;MQ0=5;MQRankSum=0.754;QD=27.31;ReadPosRankSum=4.172;VQSLOD=6.0379;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:39:50.96:0,51,449	1/1:1,18:18:29.86:386,30,0	0/0:30,0:28:44.37:0,44,631	0/0:22,0:16:26.43:0,26,409	1/1:4,36:40:84.11:1081,84,0	0/0:26,0:26:69.24:0,69,1164	0/0:28,0:28:57.20:0,57,962	0/0:39,0:39:96.31:0,96,1573	1/1:6,36:42:99:1313,102,0	0/0:58,0:58:99:0,160,2592	0/0:21,0:21:42.11:0,42,655	0/0:38,0:38:99:0,105,1743	0/0:35,1:36:63.71:0,64,1566	0/0:29,0:29:72.25:0,72,1209	1/1:4,38:41:93.30:1197,93,0	1/1:0,53:52:99:1621,126,0	0/0:3,0:20:35.19:0,35,303	1/1:3,24:27:37.41:673,37,0	0/0:27,0:27:69.24:0,69,1164	0/0:37,0:37:99:0,99,1622	0/0:49,0:50:99:0,114,2010	0/0:43,0:43:99:0,108,1813	0/0:29,0:29:81.28:0,81,1357	0/0:31,0:32:81.26:0,81,1340	1/1:2,23:24:39.13:502,39,0	0/0:41,0:41:99:0,117,1908	0/0:26,0:26:69.24:0,69,1154	0/0:17,0:17:51.11:0,51,778
chr10	94548316	.	GTTT	G	5381.40	PASS	AB=0.994;AC=14;AF=0.250;AN=56;BaseQRankSum=2.800;DP=636;FS=1.945;HRun=5;HaplotypeScore=123.9410;InbreedingCoeff=0.6161;MQ=57.83;MQ0=5;MQRankSum=-0.585;QD=20.16;ReadPosRankSum=-3.352;VQSLOD=0.5362;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:41,1:42:99:199,0,704	0/0:9,0:9:14.27:0,14,149	0/0:32,0:20:47.10:0,47,555	0/0:23,0:20:56.62:0,57,639	0/0:26,0:26:53.26:0,53,542	0/0:18,0:18:54.11:0,54,841	0/0:19,0:19:56.81:0,57,929	0/0:25,0:25:66.11:0,66,855	0/0:17,0:17:30.03:0,30,357	0/1:41,0:41:99:191,0,584	0/1:18,0:18:79.56:123,0,80	0/0:14,0:14:39.12:0,39,815	0/0:17,0:16:41.98:0,42,596	0/0:21,0:20:60.15:0,60,1058	0/0:16,0:16:32.18:0,32,339	0/0:19,0:19:38.76:0,39,422	0/1:22,0:22:86.39:190,0,86	0/0:21,0:21:32.99:0,33,352	1/1:23,9:28:80.78:941,81,0	1/1:17,7:24:71.02:774,71,0	1/1:17,11:28:68.90:791,69,0	0/0:13,0:13:39.10:0,39,731	0/0:24,0:24:69.60:0,70,1156	0/0:20,0:20:57.12:0,57,1052	0/0:18,0:18:42.06:0,42,442	1/1:18,10:28:84.07:981,84,0	1/1:16,16:32:71.26:1190,71,0	0/0:16,0:16:47.99:0,48,500
chr10	94548319	.	T	TTTGTTGTTGTTG	8444.68	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=2.216;DP=663;FS=9.056;HRun=0;HaplotypeScore=239.1837;InbreedingCoeff=0.5671;MQ=55.77;MQ0=5;MQRankSum=-6.835;QD=22.11;ReadPosRankSum=-6.343;VQSLOD=1.0058;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:52.04:0,52,1781	1/1:2,7:12:4.26:178,4,0	0/0:34,0:21:11.98:0,12,177	0/0:21,0:18:8.92:0,9,129	1/1:14,11:35:26.93:775,27,0	0/0:19,0:19:27.08:0,27,851	0/0:19,0:19:32.57:0,33,1034	0/0:24,0:24:27.05:0,27,424	1/1:6,11:22:15.05:864,15,0	1/1:38,0:39:82.05:2769,82,0	1/1:17,0:18:25.26:861,25,0	0/0:13,0:13:33.11:0,33,1037	0/0:16,0:15:21.05:0,21,569	0/0:21,0:20:39.10:0,39,1087	1/1:8,8:17:9.03:524,9,0	1/1:7,12:25:18.06:1050,18,0	1/1:23,0:23:23.47:259,23,0	1/1:11,9:25:8.52:359,9,0	0/1:31,0:27:36.38:36,0,568	0/1:26,0:26:71.60:72,0,525	0/1:26,0:26:99:99,0,353	0/0:14,0:14:27.08:0,27,831	0/0:23,0:23:40.82:0,41,1226	0/0:21,0:21:31.56:0,32,1299	1/1:12,7:23:9.03:525,9,0	0/1:28,0:28:44.61:45,0,761	0/1:32,0:32:30.30:30,0,972	0/0:16,0:16:9:0,9,163
chr10	94548363	.	TC	T	4766.17	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.185;DP=557;FS=10.117;HRun=4;HaplotypeScore=116.6826;InbreedingCoeff=0.9917;MQ=67.26;MQ0=2;MQRankSum=-3.398;QD=29.06;ReadPosRankSum=3.008;VQSLOD=3.6501;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,1729	0/0:8,0:8:18.06:0,18,245	0/0:43,0:43:99:0,111,1391	0/0:21,0:18:45.06:0,45,586	0/0:24,0:24:39.13:0,39,546	0/0:14,0:14:36.11:0,36,487	0/0:12,0:12:36.10:0,36,485	0/0:26,0:26:72.21:0,72,961	0/0:14,0:14:24.08:0,24,328	1/1:3,25:28:72.22:863,72,0	1/1:0,12:12:18.06:216,18,0	0/0:12,0:12:33.11:0,33,461	0/0:14,0:14:36.12:0,36,503	0/0:13,0:13:36.12:0,36,504	0/0:8,0:8:15.05:0,15,203	0/0:20,0:20:42.14:0,42,581	0/0:10,0:10:30.10:0,30,416	0/0:14,0:14:24.08:0,24,333	1/1:4,20:23:61.74:724,62,0	1/1:3,21:24:57.17:683,57,0	1/1:2,24:26:51.15:608,51,0	0/0:14,0:14:42.13:0,42,570	0/0:26,0:26:75.25:0,75,1042	0/0:27,0:27:59.40:0,59,1046	0/0:22,0:22:45.15:0,45,625	1/1:2,19:21:60.14:694,60,0	1/1:3,26:29:84.23:978,84,0	0/0:6,0:6:18.06:0,18,252
chr10	94549311	.	G	GTC	1302.89	PASS	AB=0.920;AC=23;AF=0.442;AN=52;BaseQRankSum=1.581;DP=447;FS=0.679;HRun=0;HaplotypeScore=90.8636;InbreedingCoeff=0.4555;MQ=45.70;MQ0=13;MQRankSum=-3.367;QD=6.15;ReadPosRankSum=-0.597;VQSLOD=3.0473;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:22:2.22:7,2,0	0/1:6,0:5:1.16:1,0,17	./.	./.	0/0:17,0:17:9.02:0,9,103	1/1:4,1:5:6:74,6,0	1/1:11,13:23:3.48:50,3,0	0/1:29,0:24:23.27:318,0,23	0/0:27,0:25:53.30:0,53,637	0/1:20,0:20:1.53:2,0,243	0/0:12,0:12:3.84:0,4,79	1/1:7,2:9:5.94:94,6,0	1/1:6,5:8:15.05:243,15,0	1/1:9,4:13:14.77:249,15,0	0/0:20,0:19:29.58:0,30,377	0/0:23,0:23:12.91:0,13,444	1/1:12,0:11:2.85:38,3,0	0/0:13,0:13:27:0,27,340	0/0:11,0:9:17.62:0,18,154	0/0:11,0:12:2.44:0,2,71	0/0:33,0:31:42.11:0,42,501	1/1:10,1:11:8.83:138,9,0	1/1:20,0:20:6:100,6,0	0/1:5,10:15:25.75:137,0,26	0/0:8,0:7:15.03:0,15,175	0/0:9,0:7:11.98:0,12,133	0/0:17,0:16:30.03:0,30,358	0/1:14,0:13:22.47:22,0,44
chr10	94549313	.	C	CTG	532	PASS	AB=0.984;AC=17;AF=0.304;AN=56;BaseQRankSum=5.862;DP=434;FS=5.626;HRun=0;HaplotypeScore=91.4352;InbreedingCoeff=0.0151;MQ=43.87;MQ0=14;MQRankSum=-3.769;QD=2.60;ReadPosRankSum=1.712;VQSLOD=1.5375;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:22:1.89:2,0,20	0/1:5,1:5:11.40:11,0,55	0/0:11,0:3:8.98:0,9,75	0/0:20,0:5:12.01:0,12,112	0/0:12,4:16:15.02:0,15,185	0/1:5,0:5:15.42:15,0,40	0/1:23,0:22:16.96:17,0,84	0/1:27,1:23:99:129,0,154	0/0:27,0:25:59.65:0,60,812	0/1:19,0:19:3.23:3,0,392	0/0:11,0:12:10.08:0,10,151	0/1:9,0:9:38.02:39,0,38	1/1:10,0:7:14.97:131,15,0	0/1:13,0:13:29.17:121,0,29	0/0:19,0:18:38.57:0,39,533	0/0:21,0:21:22.22:0,22,555	1/1:12,0:11:2.79:19,3,0	0/0:13,0:13:33.51:0,34,455	0/0:13,0:10:27.03:0,27,317	0/0:14,0:13:0.70:0,1,84	0/0:31,1:30:54.13:0,54,739	1/1:11,0:11:8.75:72,9,0	0/1:18,0:18:36.94:38,0,37	0/1:14,0:14:54.62:75,0,55	0/0:8,0:7:15.05:0,15,227	0/0:9,0:7:17.98:0,18,207	0/0:14,0:13:35.58:0,36,470	0/1:14,0:13:19.97:20,0,166
chr10	94549315	.	C	CTG	493.44	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=4.720;DP=428;FS=4.899;HRun=0;HaplotypeScore=85.8209;InbreedingCoeff=0.2017;MQ=43.36;MQ0=17;MQRankSum=-2.674;QD=3.03;ReadPosRankSum=2.651;VQSLOD=1.3054;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,15:21:2.22:7,2,0	0/0:6,0:5:8.12:0,8,54	0/0:10,0:2:5.98:0,6,51	0/0:18,0:3:6:0,6,54	0/0:14,0:14:12.03:0,12,162	0/1:5,0:5:15.42:15,0,40	0/1:21,0:20:16.96:17,0,84	0/1:28,0:22:78.40:78,0,117	0/0:28,0:26:60.02:0,60,821	0/0:18,0:18:44.64:0,45,439	0/0:12,0:12:10.15:0,10,160	0/1:9,0:9:31.05:39,0,31	1/1:10,0:7:14.97:132,15,0	0/1:13,0:13:28.17:124,0,28	0/0:19,0:18:38.57:0,39,532	0/0:21,0:21:13.08:0,13,540	1/1:3,9:11:2.85:55,3,0	0/0:13,0:13:33.04:0,33,454	0/0:15,0:10:21.40:0,21,278	0/0:15,0:14:7.86:0,8,108	0/0:32,0:30:51.13:0,51,713	1/1:11,0:11:8.75:72,9,0	0/1:18,0:18:37.93:38,0,38	0/1:14,0:14:54.64:76,0,55	0/0:8,0:7:15.05:0,15,228	0/0:10,0:7:17.96:0,18,204	0/0:14,0:13:29.89:0,30,430	0/0:12,0:11:19.36:0,19,182
chr10	94549322	.	TCC	T	840.29	PASS	AB=0.869;AC=11;AF=0.204;AN=54;BaseQRankSum=1.055;DP=411;FS=3.557;HRun=3;HaplotypeScore=95.5027;InbreedingCoeff=0.1104;MQ=40.82;MQ0=19;MQRankSum=-1.968;QD=7.85;ReadPosRankSum=-0.546;VQSLOD=0.1938;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:4.57:0,5,17	0/0:6,0:5:2.41:0,2,62	0/0:7,0:1:2.96:0,3,19	./.	0/0:14,0:14:9.02:0,9,122	0/1:4,0:4:17.96:18,0,18	0/1:19,0:18:4.90:5,0,20	0/1:10,14:18:5.53:457,0,6	0/0:31,0:29:46.91:0,47,913	0/0:17,0:17:28.56:0,29,417	0/0:11,0:11:12.55:0,13,137	0/1:8,1:9:35.35:35,0,35	0/1:7,2:7:37.95:43,0,38	0/1:10,1:11:15.65:16,0,62	0/0:22,0:21:43.60:0,44,611	0/0:24,0:23:60.30:0,60,740	1/1:10,0:9:3:38,3,0	0/0:12,0:12:29.51:0,30,499	0/0:16,0:9:23.72:0,24,244	0/0:17,0:16:8.65:0,9,94	0/0:28,2:27:42.12:0,42,664	0/1:7,2:9:15.17:80,0,15	0/0:9,9:18:3.02:0,3,8	0/0:13,0:13:13.23:0,13,113	0/0:9,0:8:16.30:0,16,252	0/0:15,0:12:3.70:0,4,212	0/0:13,0:12:30.06:0,30,421	1/1:3,9:10:22.80:292,23,0
chr10	94549357	.	C	CTT	1675.59	PASS	AB=0.812;AC=20;AF=0.357;AN=56;BaseQRankSum=7.715;DP=329;FS=109.726;HRun=0;HaplotypeScore=134.2500;InbreedingCoeff=-0.3573;MQ=67.08;MQ0=5;MQRankSum=-7.292;QD=7.58;ReadPosRankSum=0.498;VQSLOD=-0.6011;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:6:39.36:67,0,39	0/0:2,0:2:6.02:0,6,98	0/0:30,0:15:33.43:0,33,485	0/0:32,0:21:22.50:0,22,424	0/1:6,2:8:0:1,0,0	0/0:2,0:2:3.01:0,3,49	0/1:12,0:11:32.63:33,0,86	0/0:9,0:9:15.95:0,16,335	0/1:17,5:22:99:157,0,518	0/1:8,12:20:99:550,0,184	0/1:7,4:10:38.29:38,0,42	0/1:8,1:8:44.08:44,0,161	0/1:6,5:9:72.06:72,0,224	0/1:7,1:8:56.32:56,0,118	0/1:11,1:12:3.57:4,0,400	0/1:16,1:17:65.21:65,0,477	0/0:3,0:2:5.77:0,6,33	0/0:6,0:6:18.06:0,18,278	1/1:4,2:5:6.02:103,6,0	0/1:12,4:13:41.31:41,0,58	0/0:17,1:18:23.25:0,23,320	0/1:8,5:13:99:131,0,113	0/1:2,4:6:1.97:41,0,2	0/0:4,0:4:9.03:0,9,127	0/1:12,2:14:53.13:53,0,346	0/1:6,4:10:99:177,0,115	0/1:6,3:9:33.97:143,0,34	0/1:9,2:11:53.87:54,0,355
chr10	94549362	.	T	TTC	1333.26	PASS	AB=0.950;AC=18;AF=0.333;AN=54;BaseQRankSum=7.860;DP=367;FS=161.243;HRun=0;HaplotypeScore=163.4454;InbreedingCoeff=-0.2525;MQ=64.84;MQ0=5;MQRankSum=-4.878;QD=6.20;ReadPosRankSum=-0.884;VQSLOD=0.0356;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:2.24:0,2,49	0/0:2,0:2:3.01:0,3,49	0/0:37,0:17:38.42:0,38,461	0/0:41,0:23:23.97:0,24,407	0/1:9,1:9:0:0,0,0	./.	0/1:13,0:12:8.77:9,0,89	0/0:11,0:11:23.41:0,23,324	0/1:24,1:25:50.61:51,0,486	0/1:23,2:25:99:393,0,258	0/0:15,0:14:2.09:0,2,42	0/0:8,0:8:7.84:0,8,158	0/1:12,0:11:54.21:54,0,233	1/1:7,1:8:8.53:63,9,0	0/1:12,1:13:98.98:99,0,358	0/1:19,1:20:99:102,0,367	0/0:3,0:2:5.04:0,5,33	0/0:5,0:5:15.05:0,15,223	0/1:7,0:6:31.12:53,0,31	0/1:12,1:11:35.44:100,0,35	0/0:15,0:14:5.32:0,5,227	0/1:10,1:11:20.81:21,0,130	1/1:9,0:9:3.53:13,4,0	0/0:4,0:4:6.02:0,6,93	0/1:12,1:13:15.24:15,0,362	0/1:9,1:10:99:180,0,119	0/1:14,1:15:62.45:278,0,62	0/1:11,0:11:51.55:52,0,357
chr10	94549373	.	CTG	C	127.57	PASS	AB=0.852;AC=10;AF=0.179;AN=56;BaseQRankSum=2.803;DP=413;FS=22.799;HRun=0;HaplotypeScore=169.6977;InbreedingCoeff=0.1276;MQ=71.20;MQ0=10;MQRankSum=-1.340;QD=0.99;ReadPosRankSum=-1.797;VQSLOD=1.1625;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:6.43:0,6,94	0/0:3,0:2:3.01:0,3,55	0/0:47,0:20:33.92:0,34,451	0/0:63,0:34:42.96:0,43,546	0/1:12,0:11:0:0,0,0	0/1:4,0:3:0:0,0,0	0/0:14,0:13:11.81:0,12,144	0/0:22,0:19:38.85:0,39,482	0/0:22,0:22:21.45:0,21,398	0/1:27,3:30:58.72:59,0,379	0/1:10,4:12:0:1,0,0	0/0:8,0:8:2.37:0,2,185	0/0:14,0:11:19.52:0,20,300	0/0:9,0:9:2.75:0,3,16	0/0:13,0:13:35.92:0,36,493	0/0:16,0:16:26.19:0,26,379	0/0:2,0:1:3.01:0,3,46	0/0:4,0:4:9.03:0,9,145	0/0:6,0:5:5.95:0,6,50	0/1:9,7:14:30.01:30,0,47	0/1:8,2:9:0:0,0,0	0/0:10,0:10:6.71:0,7,117	1/1:15,0:14:0.15:1,0,0	0/0:3,0:3:0:0,0,0	0/0:11,0:11:24.07:0,24,392	0/1:9,2:11:59.76:60,0,115	0/1:12,4:16:80.92:81,0,136	0/0:8,0:8:3.19:0,3,270
chr10	94549407	.	CTCTCTG	C	664.27	PASS	AB=0.970;AC=13;AF=0.232;AN=56;BaseQRankSum=0.520;DP=509;FS=26.226;HRun=0;HaplotypeScore=202.5596;InbreedingCoeff=-0.0660;MQ=56.98;MQ0=24;MQRankSum=-1.963;QD=2.89;ReadPosRankSum=-1.254;VQSLOD=0.7076;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:9:0.85:0,1,2	0/0:6,1:6:8.76:0,9,110	0/1:67,0:15:2.40:2,0,148	0/0:79,0:25:24.71:0,25,258	0/0:18,1:17:2.86:0,3,64	0/0:8,0:6:2.85:0,3,28	0/0:13,0:12:11.48:0,11,154	0/0:21,0:14:23.93:0,24,306	0/1:20,0:20:82.75:83,0,161	0/1:39,1:38:99:139,0,1072	0/0:15,0:13:4.66:0,5,121	0/0:10,0:11:11.29:0,11,165	0/1:11,0:9:24.59:39,0,25	0/1:9,0:10:13.06:13,0,40	0/0:12,0:12:15.45:0,15,223	0/1:15,3:18:99:197,0,314	1/1:3,0:4:8.76:75,9,0	0/0:2,0:3:0.40:0,0,17	0/1:9,0:6:42.93:43,0,72	0/0:21,0:19:14.60:0,15,210	0/0:14,1:14:12.72:0,13,185	1/1:13,0:14:1.40:16,1,0	0/0:19,0:19:5.73:0,6,31	0/0:6,0:6:3.01:0,3,30	0/0:14,0:14:10.28:0,10,163	0/1:16,1:17:83.33:83,0,368	0/1:18,1:19:99:116,0,378	0/0:6,0:6:14.71:0,15,145
chr10	94549413	.	GTC	G	1544.20	PASS	AB=0.907;AC=35;AF=0.625;AN=56;BaseQRankSum=0.942;DP=485;FS=89.189;HRun=0;HaplotypeScore=175.0530;InbreedingCoeff=0.2859;MQ=51.02;MQ0=23;MQRankSum=0.624;QD=4.83;ReadPosRankSum=2.415;VQSLOD=-0.3472;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:0.82:0,1,2	0/1:6,1:6:15.41:51,0,15	0/1:50,8:14:35.85:36,0,58	0/0:70,6:20:10.59:0,11,115	1/1:15,3:16:2.82:17,3,0	1/1:6,3:7:3:25,3,0	0/1:9,2:10:1.88:2,0,73	0/0:17,0:11:17.80:0,18,160	0/0:21,0:22:4.47:0,4,36	1/1:29,9:36:20.21:459,20,0	1/1:14,1:13:5.65:38,6,0	0/0:13,1:14:12.85:0,13,131	1/1:8,1:8:11.61:100,12,0	1/1:9,0:9:2.85:30,3,0	1/1:8,2:10:14.40:117,14,0	1/1:16,2:18:15.18:138,15,0	0/1:5,0:5:9.07:9,0,13	0/1:2,0:2:7.18:11,0,7	1/1:6,2:6:6.02:73,6,0	1/1:15,3:15:8.41:62,8,0	0/1:14,2:16:8.36:44,0,8	1/1:14,1:15:3.31:10,3,0	0/0:18,2:19:6.87:0,7,48	0/0:6,0:6:3.68:0,4,15	1/1:11,1:12:8.38:71,8,0	1/1:13,4:17:18.44:255,18,0	1/1:17,2:19:9.91:149,10,0	0/1:5,1:6:17.75:18,0,86
chr10	94549417	.	C	CTCTG	1275.71	PASS	AB=0.976;AC=24;AF=0.429;AN=56;BaseQRankSum=1.523;DP=485;FS=10.419;HRun=0;HaplotypeScore=194.8533;InbreedingCoeff=-0.0283;MQ=48.53;MQ0=21;MQRankSum=-1.104;QD=4.27;ReadPosRankSum=-0.313;VQSLOD=1.9298;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:0.03:0,0,0	0/0:7,0:6:7.35:0,7,41	0/1:51,0:14:33.35:33,0,78	0/0:70,0:16:6.99:0,7,86	0/0:18,0:16:1.60:0,2,5	0/1:10,0:8:0.48:1,0,0	0/1:11,0:11:21.08:22,0,21	0/0:16,1:10:17.73:0,18,159	0/1:23,0:23:24.31:40,0,24	0/1:34,2:35:99:625,0,118	0/0:15,0:13:4.47:0,4,10	0/0:14,1:15:8.24:0,8,89	1/1:9,0:8:4.73:49,5,0	1/1:9,1:10:2.88:80,3,0	0/1:10,0:10:5.68:27,0,6	0/0:18,1:19:22.43:0,22,107	0/1:5,0:5:12.56:13,0,23	1/1:2,0:3:0.36:22,0,0	1/1:8,0:6:5.94:56,6,0	0/1:16,1:15:1.19:29,0,1	0/0:16,0:17:6.79:0,7,45	1/1:15,1:16:1.76:8,2,0	0/1:18,1:18:11.25:12,0,11	0/0:7,0:7:2.99:0,3,17	0/1:13,0:13:0.11:26,0,0	0/1:16,0:17:11.28:122,0,11	0/1:18,2:20:6.21:237,0,6	0/1:6,0:6:18.11:18,0,114
chr10	94549421	.	CTG	C	1056.02	PASS	AB=0.909;AC=32;AF=0.571;AN=56;BaseQRankSum=2.514;DP=451;FS=13.771;HRun=0;HaplotypeScore=165.4058;InbreedingCoeff=-0.0495;MQ=47.08;MQ0=19;MQRankSum=-4.651;QD=3.21;ReadPosRankSum=-3.052;VQSLOD=1.1021;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,1:11:0.85:0,1,2	0/1:7,0:6:2.60:10,0,3	0/1:42,0:12:22.20:22,0,30	0/0:65,0:13:0.63:0,1,87	0/0:15,1:14:1.60:0,2,5	1/1:10,0:8:2.37:8,2,0	0/1:13,0:13:21.19:21,0,66	0/0:16,0:9:8.96:0,9,71	1/1:14,5:19:5.41:110,5,0	0/1:32,5:36:2.15:329,0,2	0/0:11,3:12:2.10:0,2,6	0/1:12,3:15:36.44:36,0,73	1/1:8,1:8:14.53:89,15,0	1/1:8,0:8:2.65:13,3,0	0/1:11,1:12:0.08:19,0,0	0/1:18,1:19:18.50:74,0,19	1/1:5,0:5:7.65:48,8,0	0/1:2,1:3:2.70:35,0,3	1/1:4,0:3:5.90:38,6,0	0/1:13,4:14:3.35:10,0,3	0/1:18,0:18:9.04:15,0,9	1/1:9,2:11:3.94:22,4,0	0/1:16,2:18:2.91:3,0,35	1/1:7,0:7:2.67:8,3,0	0/1:10,3:13:1.52:8,0,2	1/1:14,1:15:21.30:178,21,0	0/1:17,2:19:4.44:93,0,4	0/1:6,0:6:4.23:4,0,44
chr10	94549423	.	G	GTCTC	1255.50	PASS	AB=0.974;AC=24;AF=0.429;AN=56;BaseQRankSum=-0.355;DP=434;FS=9.098;HRun=0;HaplotypeScore=173.6736;InbreedingCoeff=-0.0874;MQ=46.47;MQ0=19;MQRankSum=-2.639;QD=4.30;ReadPosRankSum=-3.953;VQSLOD=0.6249;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:0.04:0,0,0	0/0:7,0:6:8.67:0,9,62	0/0:39,0:9:2.67:0,3,15	0/1:54,0:11:6.71:7,0,40	0/0:16,0:14:2.58:0,3,13	0/0:9,0:7:1.41:0,1,4	0/1:11,0:12:8.24:114,0,8	0/1:10,0:4:14.97:15,0,20	0/1:19,0:19:12.20:122,0,12	0/1:38,0:37:48.16:409,0,48	0/0:15,0:13:5.84:0,6,23	0/1:13,2:15:6.07:181,0,6	1/1:9,0:8:8.97:86,9,0	1/1:8,0:8:3:29,3,0	0/0:13,0:13:11.26:0,11,64	0/0:20,0:20:12.86:0,13,160	1/1:5,0:5:2.92:35,3,0	0/1:3,0:3:20.58:65,0,21	1/1:5,0:4:5.92:39,6,0	0/0:17,0:14:4.87:0,5,21	0/1:18,0:18:11.92:12,0,29	1/1:10,0:11:1.60:7,2,0	0/1:14,3:17:13.66:65,0,14	0/1:7,0:7:0.44:40,0,0	0/1:12,0:12:5.93:6,0,12	0/1:15,0:15:18.64:84,0,19	0/1:19,0:19:53.86:90,0,54	0/0:6,0:6:8.70:0,9,48
chr10	94549433	.	CTG	C	1594.28	PASS	AB=0.942;AC=34;AF=0.607;AN=56;BaseQRankSum=-1.831;DP=406;FS=1.429;HRun=0;HaplotypeScore=147.4287;InbreedingCoeff=0.1208;MQ=46.79;MQ0=17;MQRankSum=-0.803;QD=6.04;ReadPosRankSum=-3.590;VQSLOD=2.5524;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:9:0.79:0,1,2	1/1:4,1:5:1.42:58,1,0	0/0:29,0:3:3:0,3,27	0/0:46,0:11:5.10:0,5,49	0/0:11,2:12:1.60:0,2,5	1/1:8,0:7:1.82:29,2,0	0/1:15,0:15:11.80:79,0,12	0/0:8,0:4:6.02:0,6,98	0/1:18,1:19:17.21:108,0,17	0/1:31,3:34:34.33:367,0,34	0/0:16,0:14:1.82:0,2,5	0/1:13,1:14:36.36:36,0,40	1/1:7,0:7:1.05:72,1,0	1/1:8,0:8:5.76:33,6,0	1/1:11,2:13:10.23:120,10,0	1/1:15,5:19:16.01:232,16,0	1/1:6,0:6:3.15:19,3,0	0/0:4,0:4:5.28:0,5,30	1/1:3,1:3:3.01:37,3,0	1/1:16,2:15:0.42:37,0,0	1/1:21,1:22:1.60:66,2,0	1/1:10,0:12:3.98:28,4,0	0/0:15,0:15:6.45:0,6,37	1/1:6,0:6:1.54:22,2,0	1/1:11,1:13:3.21:37,3,0	1/1:10,4:14:13.40:188,13,0	0/1:17,3:20:1.04:159,0,1	0/1:4,0:4:13.33:13,0,36
chr10	94549518	.	TGTC	T	912.66	PASS	AB=0.995;AC=10;AF=0.179;AN=56;BaseQRankSum=-0.478;DP=471;FS=7.056;HRun=0;HaplotypeScore=113.4037;InbreedingCoeff=0.2565;MQ=52.36;MQ0=2;MQRankSum=1.496;QD=6.21;ReadPosRankSum=-4.656;VQSLOD=-0.3272;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,1:30:99:302,0,296	1/1:4,0:4:6.89:57,7,0	0/0:20,0:18:33.92:0,34,441	0/0:15,0:12:35.51:0,36,322	0/0:9,0:9:19.92:0,20,177	0/0:7,0:7:20.83:0,21,258	0/1:30,0:30:21.64:22,0,715	0/0:17,0:17:25.62:0,26,388	0/0:15,0:15:26.22:0,26,259	0/0:33,0:33:87.40:0,87,1109	0/0:11,0:11:26.47:0,26,271	0/0:14,0:14:38.88:0,39,499	0/0:14,0:14:38.88:0,39,441	0/1:26,0:26:37.71:38,0,537	0/0:21,0:21:44.79:0,45,544	0/0:12,0:12:29.87:0,30,418	1/1:2,17:19:36.01:526,36,0	0/0:9,0:9:14.95:0,15,143	0/0:21,0:20:41.69:0,42,345	0/0:13,0:13:29.79:0,30,236	0/0:30,0:30:15.60:0,16,401	0/0:19,0:19:50.53:0,51,651	0/1:12,0:12:77.30:81,0,77	0/1:19,0:19:33.56:34,0,402	0/0:8,0:8:17.61:0,18,181	0/0:22,0:22:47.87:0,48,659	0/0:14,0:14:26.47:0,26,309	0/1:7,0:6:2.12:2,0,169
chr10	94549521	.	C	CGTT	4401.78	PASS	AB=0.857;AC=47;AF=0.839;AN=56;BaseQRankSum=1.613;DP=501;FS=2.026;HRun=0;HaplotypeScore=107.8156;InbreedingCoeff=0.6491;MQ=50.72;MQ0=2;MQRankSum=-3.043;QD=10.56;ReadPosRankSum=0.691;VQSLOD=4.6955;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:16.77:0,17,243	1/1:5,0:5:5.94:44,6,0	0/0:19,0:18:9.02:0,9,101	0/0:15,0:12:11.98:0,12,128	1/1:10,0:10:6.02:74,6,0	1/1:4,0:7:9.03:118,9,0	1/1:29,0:30:12:126,12,0	1/1:17,0:17:0.47:1,0,0	1/1:16,0:16:9.03:112,9,0	1/1:15,20:36:54.17:1005,54,0	1/1:6,6:12:12.04:234,12,0	1/1:5,0:18:24.08:314,24,0	1/1:9,0:19:12.04:157,12,0	1/1:24,0:26:18.51:219,19,0	1/1:25,0:25:21.07:261,21,0	1/1:15,0:15:24.08:299,24,0	0/0:19,0:19:29.43:0,29,182	1/1:11,0:11:3.01:37,3,0	1/1:15,0:18:11.87:139,12,0	0/1:10,0:12:1.12:34,0,1	1/1:29,0:29:13.24:172,13,0	1/1:13,0:24:17.89:212,18,0	1/1:12,0:12:3:25,3,0	1/1:17,0:20:18.03:223,18,0	1/1:7,0:7:6.02:75,6,0	1/1:14,8:23:15.94:247,16,0	1/1:6,0:17:14.67:196,15,0	1/1:5,0:6:6.02:78,6,0
chr10	94549540	.	G	GTTATTGTTA	5878.03	PASS	AB=0.876;AC=21;AF=0.375;AN=56;BaseQRankSum=-0.105;DP=542;FS=64.219;HRun=0;HaplotypeScore=148.9191;InbreedingCoeff=-0.1619;MQ=51.25;MQ0=3;MQRankSum=-6.265;QD=18.14;ReadPosRankSum=8.243;VQSLOD=1.0137;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:91.44:0,91,1650	1/1:7,0:7:16.75:178,17,0	0/0:30,0:28:73.64:0,74,1111	0/0:19,0:12:30.09:0,30,626	0/1:3,0:15:10.30:300,0,10	0/1:10,0:10:99:276,0,117	0/1:27,0:27:64.13:64,0,638	0/0:13,0:13:39.09:0,39,602	0/1:4,0:21:12.96:360,0,13	0/0:34,0:34:76.47:0,76,882	0/0:17,0:17:33.68:0,34,355	0/1:24,0:24:99:751,0,253	0/1:21,0:21:99:363,0,231	0/1:21,0:21:99:394,0,345	0/1:2,0:30:20.90:840,0,21	1/1:1,0:18:23.44:875,23,0	0/0:21,0:21:42.02:0,42,945	0/1:3,1:14:34.96:113,0,35	0/1:14,0:13:39.43:39,0,170	0/0:14,0:14:10.04:0,10,329	0/1:25,0:25:30.96:31,0,528	0/1:20,0:21:99:379,0,286	0/0:12,0:12:29.46:0,29,243	0/1:21,0:21:99:389,0,246	1/1:2,0:7:6.02:247,6,0	0/0:24,0:24:9.12:0,9,626	0/1:18,0:18:99:101,0,124	0/1:9,0:8:99:178,0,105
chr10	94549892	.	CAGAG	C	213.32	PASS	AB=0.974;AC=14;AF=0.368;AN=38;BaseQRankSum=3.511;DP=604;FS=11.288;HRun=0;HaplotypeScore=114.2695;InbreedingCoeff=0.5724;MQ=62.24;MQ0=17;MQRankSum=-2.259;QD=0.97;ReadPosRankSum=-0.644;VQSLOD=0.9725;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:3.63:14,4,0	1/1:5,0:5:3.01:36,3,0	./.	0/1:64,0:21:0:0,0,0	0/1:17,1:18:0:1,0,0	0/0:22,0:22:15.52:0,16,311	0/0:35,0:35:27.05:0,27,476	./.	1/1:25,0:25:0.47:1,0,0	0/0:20,0:19:12.04:0,12,203	./.	0/0:10,0:10:3.01:0,3,65	0/0:20,0:20:9.03:0,9,170	./.	./.	1/1:14,3:17:6.02:92,6,0	1/1:43,0:42:17.79:145,18,0	1/1:14,1:14:2.90:46,3,0	0/0:21,0:21:9.50:0,10,187	./.	0/0:13,0:13:3.01:0,3,52	0/0:16,0:16:3.01:0,3,67	0/0:19,0:20:6.02:0,6,117	0/0:29,0:28:26.54:0,27,442	./.	0/0:24,0:24:27.72:0,28,472	./.	./.
chr10	94549935	.	AGAGAGAGAGAGAAT	A	797.86	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.457;DP=599;FS=0.000;HRun=0;HaplotypeScore=195.2261;InbreedingCoeff=0.9224;MQ=57.07;MQ0=19;MQRankSum=-3.777;QD=13.30;ReadPosRankSum=0.814;VQSLOD=2.5467;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,25:29:5.45:135,5,0	0/0:12,0:12:33.07:0,33,734	0/0:19,0:14:25.71:0,26,537	0/0:25,0:15:38.97:0,39,673	0/0:25,0:25:55.23:0,55,1053	0/0:24,0:24:53.46:0,53,1358	0/0:34,0:34:87.22:0,87,2579	0/0:26,0:25:71.05:0,71,1144	0/0:15,0:15:39.10:0,39,780	0/0:35,0:35:95.91:0,96,2063	0/0:14,0:13:33.11:0,33,519	0/0:17,0:17:36.07:0,36,654	0/0:22,0:21:57.66:0,58,1243	0/0:20,0:17:38.95:0,39,997	0/0:18,0:18:40.69:0,41,943	0/0:19,0:19:51.15:0,51,1289	1/1:1,28:28:18.06:771,18,0	0/0:21,0:21:52.73:0,53,1106	0/0:21,0:21:56.40:0,56,1257	0/0:12,0:12:33.09:0,33,488	0/0:19,0:19:29.94:0,30,556	0/0:17,0:17:42.14:0,42,848	0/0:24,0:21:54.17:0,54,1068	0/0:37,0:35:81.27:0,81,2290	0/0:16,0:15:38.99:0,39,704	0/0:29,0:28:83.09:0,83,2004	0/0:11,0:9:30.10:0,30,520	0/0:7,0:6:15.01:0,15,301
chr10	94550532	.	T	TTCC	1141.26	PASS	AB=1.000;AC=6;AF=0.111;AN=54;BaseQRankSum=0.149;DP=373;FS=7.734;HRun=0;HaplotypeScore=76.7471;InbreedingCoeff=0.7290;MQ=69.57;MQ0=2;MQRankSum=-2.592;QD=19.68;ReadPosRankSum=1.759;VQSLOD=2.9043;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:26,1:27:48:844,48,0	0/0:6,0:6:12.01:0,12,204	0/0:22,0:14:1.96:0,2,327	0/0:22,0:16:33.62:0,34,414	0/0:12,0:12:33.07:0,33,472	0/0:7,0:7:11.89:0,12,82	0/0:18,0:19:10.02:0,10,225	0/0:17,0:17:36.33:0,36,271	0/0:10,0:10:30.10:0,30,497	0/0:5,0:5:15.05:0,15,242	0/0:8,0:8:24.01:0,24,323	0/1:7,0:7:0:0,0,0	0/0:10,0:10:14.95:0,15,118	./.	0/0:14,0:14:36.11:0,36,580	0/0:10,0:10:15.05:0,15,255	1/1:1,11:12:18.06:414,18,0	0/0:17,0:17:45.15:0,45,754	0/0:15,0:15:35.66:0,36,484	0/0:12,0:13:39.09:0,39,593	0/0:28,0:29:66.21:0,66,1057	0/1:11,0:12:0:0,0,0	0/0:10,0:10:23.32:0,23,167	0/0:11,0:12:5.88:0,6,48	0/0:11,0:11:27.09:0,27,449	0/0:18,0:19:54.17:0,54,833	0/0:9,0:10:30.09:0,30,460	0/0:6,0:6:14.96:0,15,120
chr10	94550533	.	T	TC	651.57	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=4.861;DP=370;FS=7.362;HRun=1;HaplotypeScore=60.8586;InbreedingCoeff=0.6060;MQ=69.56;MQ0=2;MQRankSum=-1.557;QD=6.65;ReadPosRankSum=1.458;VQSLOD=0.4814;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:28:43.24:601,43,0	0/0:6,0:6:12.04:0,12,155	0/0:20,0:13:3.22:0,3,270	0/0:24,0:16:20.95:0,21,328	0/0:12,0:12:33.06:0,33,372	0/0:6,0:6:0.01:0,0,0	0/1:20,0:20:1.07:13,0,1	0/1:3,0:17:5.73:6,0,41	0/0:10,0:10:30.10:0,30,383	0/0:5,0:5:15.05:0,15,194	0/0:8,0:8:24.02:0,24,263	0/0:7,0:7:0:0,0,0	0/0:10,0:10:1.35:0,1,3	./.	0/0:14,0:14:36.57:0,37,439	0/0:10,0:10:15.05:0,15,194	1/1:13,0:13:17.85:147,18,0	0/0:16,0:16:45.15:0,45,578	0/0:14,0:14:35.65:0,36,384	0/0:13,0:13:38.45:0,38,436	0/0:27,0:27:66.18:0,66,802	0/1:10,0:10:0.11:0,0,0	1/1:10,0:10:4.96:18,5,0	0/0:12,0:12:0:0,0,0	0/0:12,0:12:27:0,27,337	0/0:20,0:19:54.11:0,54,627	0/0:10,0:10:30.02:0,30,337	0/0:5,0:6:2.13:0,2,5
chr10	94550534	.	CT	C	1275.27	PASS	AB=0.717;AC=21;AF=0.375;AN=56;BaseQRankSum=2.149;DP=368;FS=3.551;HRun=2;HaplotypeScore=55.9248;InbreedingCoeff=0.7838;MQ=69.59;MQ0=3;MQRankSum=-1.045;QD=7.55;ReadPosRankSum=-0.728;VQSLOD=0.7022;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:30.49:217,30,0	0/0:6,0:6:12.47:0,12,113	0/1:21,0:13:3.70:4,0,230	0/0:24,0:16:27.97:0,28,271	0/0:12,0:12:19.14:0,19,221	1/1:6,0:6:11.89:86,12,0	1/1:18,2:20:47.56:374,48,0	1/1:17,0:17:38.80:302,39,0	0/0:10,0:10:29.95:0,30,306	0/0:5,0:5:14.24:0,14,120	0/0:8,0:8:15.37:0,15,123	0/1:0,7:7:0:0,0,0	1/1:7,3:10:12.86:100,13,0	0/1:1,8:9:0:0,0,0	0/0:14,0:14:35.91:0,36,341	0/0:10,0:10:15.02:0,15,165	0/1:13,0:13:2.30:2,0,6	0/0:16,0:16:44.66:0,45,460	0/0:13,0:13:22.42:0,22,204	0/0:13,0:13:17.47:0,17,206	0/0:26,0:26:57.86:0,58,391	0/1:2,8:10:0:0,0,0	1/1:10,0:10:24:207,24,0	1/1:1,11:12:6:52,6,0	0/0:12,0:12:29.49:0,29,315	0/0:20,0:19:37.74:0,38,281	0/0:10,0:10:23.80:0,24,140	1/1:6,0:6:14.94:119,15,0
chr10	94550536	.	C	CT	435.56	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=5.571;DP=370;FS=2.034;HRun=1;HaplotypeScore=66.3009;InbreedingCoeff=0.4782;MQ=73.02;MQ0=3;MQRankSum=-0.456;QD=8.38;ReadPosRankSum=2.465;VQSLOD=1.2692;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,13:28:38:481,38,0	0/0:7,0:7:12:0,12,105	0/0:21,0:13:11.88:0,12,284	0/0:26,0:18:1.59:0,2,255	0/0:12,0:12:27.71:0,28,220	0/0:6,0:6:11.89:0,12,84	0/0:21,0:21:43.72:0,44,319	0/0:17,0:17:37.88:0,38,226	0/0:10,0:10:27.03:0,27,280	0/0:6,0:6:11.97:0,12,102	0/0:5,0:5:14.86:0,15,107	0/0:7,0:7:0:0,0,0	0/0:11,0:11:14.90:0,15,121	0/0:9,0:9:3:0,3,25	0/0:13,0:13:33.38:0,33,275	0/0:10,0:10:15.02:0,15,148	0/1:13,0:13:13.42:58,0,13	0/0:16,0:16:45.02:0,45,436	0/0:13,0:13:34.63:0,35,249	0/0:13,0:13:38.63:0,39,292	0/0:25,0:25:59.74:0,60,467	0/1:11,0:11:0:0,0,0	0/0:10,0:10:23.96:0,24,197	0/0:12,0:12:5.99:0,6,49	0/0:13,0:13:28.73:0,29,246	0/0:19,0:18:47.71:0,48,352	0/0:10,0:10:29.83:0,30,220	0/0:6,0:6:14.95:0,15,118
chr10	94550736	.	GTTTTT	G	4453.89	PASS	AB=0.616;AC=29;AF=0.518;AN=56;BaseQRankSum=-2.155;DP=463;FS=14.577;HRun=16;HaplotypeScore=106.6654;InbreedingCoeff=0.7421;MQ=65.95;MQ0=3;MQRankSum=-5.575;QD=19.53;ReadPosRankSum=2.222;VQSLOD=1.1659;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:42:72.10:0,72,1104	0/0:3,0:8:12.03:0,12,146	0/0:27,0:15:26.85:0,27,298	0/0:12,0:8:6.06:0,6,136	0/0:8,0:25:48.04:0,48,561	1/1:3,11:14:36.08:538,36,0	1/1:6,11:17:39:602,39,0	1/1:7,16:24:10.13:597,10,0	0/0:5,0:12:24:0,24,246	0/0:8,0:12:18.05:0,18,116	0/1:6,0:16:0.02:0,0,130	1/1:2,5:7:14.94:234,15,0	1/1:4,2:6:8.91:139,9,0	1/1:3,9:12:27.04:420,27,0	0/0:6,0:20:36.22:0,36,352	0/0:3,0:9:18.03:0,18,183	0/0:21,0:32:72.66:0,73,1208	0/0:4,0:20:52.82:0,53,518	1/1:10,1:22:4.17:132,4,0	0/1:6,1:16:37.93:80,0,38	1/1:2,0:5:5.45:23,5,0	1/1:3,12:16:39:595,39,0	1/1:3,7:11:20.99:314,21,0	1/1:4,12:16:29.32:466,29,0	0/0:6,0:12:20.78:0,21,197	1/1:7,1:18:22.76:118,23,0	0/1:8,0:21:27.74:37,0,28	1/1:2,3:5:11.89:156,12,0
chr10	94550814	.	TA	T	6285.30	PASS	AB=0.532;AC=18;AF=0.321;AN=56;BaseQRankSum=-0.874;DP=504;FS=2.165;HRun=1;HaplotypeScore=66.7944;InbreedingCoeff=0.8551;MQ=57.09;MQ0=9;MQRankSum=-0.485;QD=36.12;ReadPosRankSum=0.883;VQSLOD=5.1202;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:99:0,99,1526	0/0:9,0:8:24.03:0,24,332	0/0:6,0:3:9.03:0,9,144	0/0:6,0:5:15.05:0,15,232	0/0:20,0:19:48.16:0,48,765	1/1:0,22:22:63.17:858,63,0	1/1:0,24:24:60.20:837,60,0	0/1:2,15:16:2.72:521,0,3	0/0:16,0:16:45.15:0,45,719	0/0:17,0:17:45.15:0,45,693	0/0:17,0:17:48.16:0,48,766	1/1:0,17:18:48.16:671,48,0	1/1:0,12:12:30.10:418,30,0	1/1:0,19:19:48.16:666,48,0	0/0:20,0:20:57.18:0,57,887	0/0:15,0:15:45.15:0,45,719	0/0:25,0:24:60.18:0,60,927	0/0:22,0:20:57.18:0,57,877	0/0:18,0:17:42.14:0,42,661	0/0:17,0:17:48.16:0,48,766	0/0:17,0:15:42.14:0,42,671	1/1:0,19:19:54.18:750,54,0	1/1:0,14:14:39.13:545,39,0	1/1:0,21:21:57.08:750,57,0	0/0:15,0:15:36.12:0,36,575	0/0:20,0:20:57.18:0,57,886	0/0:23,0:23:63.21:0,63,984	0/1:1,7:8:23.82:270,0,24
chr10	94551237	.	ATT	A	2666.89	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.240;DP=537;FS=22.862;HRun=2;HaplotypeScore=68.7712;InbreedingCoeff=0.9790;MQ=89.93;MQ0=0;MQRankSum=-5.032;QD=44.45;ReadPosRankSum=3.369;VQSLOD=2.3007;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:96.33:1565,96,0	0/0:5,0:5:11.61:0,12,242	0/0:21,1:22:31.87:0,32,1191	0/0:21,0:21:63.13:0,63,1159	0/0:18,0:18:54.19:0,54,1078	0/0:15,0:15:45.14:0,45,878	0/0:42,0:42:99:0,126,2473	0/0:22,0:22:66.23:0,66,1336	0/0:10,0:10:30.10:0,30,600	0/0:22,0:22:66.22:0,66,1281	0/0:8,0:8:24:0,24,444	0/0:17,0:17:51.16:0,51,988	0/0:16,0:16:45.15:0,45,890	0/0:15,0:15:45.15:0,45,914	0/0:16,0:16:48.12:0,48,899	0/0:15,0:15:45.15:0,45,914	1/1:0,26:26:75.26:1223,75,0	0/0:34,0:34:99:0,102,1898	0/0:17,0:17:48.15:0,48,927	0/0:11,0:11:33.11:0,33,670	0/0:53,0:53:99:0,160,3220	0/0:12,0:12:36.12:0,36,731	0/0:11,0:11:33.11:0,33,671	0/0:21,0:21:63.19:0,63,1200	0/0:14,0:14:42.14:0,42,844	0/0:19,0:19:54.18:0,54,1091	0/0:14,0:14:42.13:0,42,817	0/0:7,0:7:21.07:0,21,403
chr10	94551633	.	T	TTAAATAAA	1986.36	PASS	AC=24;AF=0.706;AN=34;BaseQRankSum=-2.722;DP=227;FS=4.274;HRun=0;HaplotypeScore=59.6344;InbreedingCoeff=0.4922;MQ=88.61;MQ0=1;MQRankSum=-1.862;QD=20.91;ReadPosRankSum=-0.907;VQSLOD=1.7620;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:24:8.82:0,9,125	./.	./.	./.	1/1:11,3:14:9.03:319,9,0	1/1:6,3:10:9.03:367,9,0	1/1:3,1:4:3.01:123,3,0	./.	1/1:2,1:3:3.01:123,3,0	0/0:3,0:3:3.01:0,3,75	0/0:5,0:5:3.01:0,3,75	1/1:6,0:6:3.01:82,3,0	1/1:6,0:6:3.01:62,3,0	1/1:10,0:10:3.01:40,3,0	./.	./.	0/0:7,0:10:8.90:0,9,162	./.	1/1:16,2:18:9.03:301,9,0	1/1:5,0:5:3.01:111,3,0	./.	./.	1/1:4,0:6:3.01:104,3,0	./.	1/1:7,1:8:6.02:235,6,0	./.	1/1:3,2:5:6.02:245,6,0	0/0:9,0:9:24.08:0,24,532
chr10	94551757	.	G	GA	525.68	PASS	AC=14;AF=0.350;AN=40;BaseQRankSum=2.980;DP=76;FS=1.421;HRun=9;HaplotypeScore=13.0597;InbreedingCoeff=0.5617;MQ=51.22;MQ0=5;MQRankSum=-0.980;QD=18.13;ReadPosRankSum=-0.333;VQSLOD=1.9404;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,5:7:15.04:166,15,0	1/1:0,1:1:3.01:33,3,0	0/0:7,0:4:11.99:0,12,103	0/0:2,0:1:2.99:0,3,23	./.	0/0:3,0:3:6:0,6,52	0/0:2,0:1:2.96:0,3,19	0/0:9,0:8:20.98:0,21,179	./.	./.	./.	./.	0/0:1,0:1:3:0,3,26	./.	1/1:1,2:3:6.02:66,6,0	1/1:1,1:2:3.01:33,3,0	1/1:1,4:5:13.28:135,13,0	1/1:4,5:8:15.04:166,15,0	0/0:2,0:2:3:0,3,26	0/0:3,0:2:3:0,3,26	0/0:2,0:2:6:0,6,52	0/0:1,0:1:2.94:0,3,18	./.	0/0:4,0:4:2.99:0,3,26	1/1:0,2:2:6.02:66,6,0	./.	0/0:4,0:3:9:0,9,78	0/0:3,0:3:9:0,9,78
chr10	94552133	.	TGAAC	T	163.36	PASS	AC=10;AF=0.833;AN=12;BaseQRankSum=1.495;DP=220;FS=0.000;HRun=0;HaplotypeScore=9.2897;MQ=10.28;MQ0=200;MQRankSum=0.198;QD=2.77;ReadPosRankSum=-0.922;VQSLOD=0.6677;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,10:3:3.01:55,3,0	./.	./.	./.	./.	1/1:1,13:2:3.01:40,3,0	./.	./.	./.	./.	./.	1/1:2,13:2:3.01:55,3,0	1/1:0,5:1:3.01:37,3,0	./.	./.	./.	1/1:3,10:2:3.01:55,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/0:10,0:3:6.02:0,6,157	./.
chr10	94552269	.	A	AT	89.78	PASS	AC=6;AF=0.188;AN=32;BaseQRankSum=1.010;DP=223;FS=4.289;HRun=0;HaplotypeScore=28.6288;InbreedingCoeff=0.5188;MQ=19.55;MQ0=156;MQRankSum=0.057;QD=5.99;ReadPosRankSum=-0.172;VQSLOD=2.3009;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:7:18.02:0,18,229	1/1:0,4:1:3.01:48,3,0	./.	./.	./.	0/0:8,0:5:9.03:0,9,126	./.	./.	1/1:1,3:2:6.02:95,6,0	0/0:9,0:4:12.04:0,12,168	0/0:5,0:4:6.02:0,6,84	0/0:8,0:4:9.03:0,9,125	0/0:7,0:4:12.04:0,12,167	0/0:11,0:3:6.02:0,6,84	1/1:0,7:2:3.01:48,3,0	./.	0/0:6,0:5:3.01:0,3,42	./.	./.	./.	./.	0/0:11,0:7:18.06:0,18,251	0/0:8,0:5:15.05:0,15,209	0/0:9,0:5:12.04:0,12,168	./.	0/0:6,0:1:3.01:0,3,42	0/0:6,0:3:6.02:0,6,84	./.
chr10	94552409	.	A	AGAG	193.20	PASS	AC=4;AF=0.40;AN=10;BaseQRankSum=2.219;DP=182;FS=21.004;HRun=0;HaplotypeScore=24.1001;MQ=7.85;MQ0=166;MQRankSum=0.361;QD=10.17;ReadPosRankSum=0.361;VQSLOD=1.2817;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:2:3.01:0,3,56	./.	./.	./.	./.	0/0:3,0:3:6.02:0,6,112	./.	./.	./.	./.	./.	./.	0/0:6,0:1:3.01:0,3,56	./.	./.	./.	./.	1/1:2,1:1:3.01:58,3,0	./.	./.	./.	./.	./.	1/1:12,4:4:12.04:213,12,0	./.	./.	./.	./.
chr10	94552410	.	T	TG	47.65	PASS	AC=4;AF=0.40;AN=10;BaseQRankSum=2.219;DP=180;FS=21.004;HRun=0;HaplotypeScore=25.3202;MQ=7.89;MQ0=164;MQRankSum=-0.876;QD=2.51;ReadPosRankSum=0.000;VQSLOD=0.6132;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:2:3.01:0,3,42	./.	./.	./.	./.	0/0:3,0:3:6.02:0,6,83	./.	./.	./.	./.	./.	./.	0/0:6,0:1:3.01:0,3,42	./.	./.	./.	./.	1/1:2,1:1:3:28,3,0	./.	./.	./.	./.	./.	1/1:12,4:4:11.98:97,12,0	./.	./.	./.	./.
chr10	94552535	.	GT	G	637.91	PASS	AB=1.000;AC=5;AF=0.096;AN=52;BaseQRankSum=2.967;DP=278;FS=4.336;HRun=2;HaplotypeScore=34.2242;InbreedingCoeff=0.5777;MQ=47.15;MQ0=12;MQRankSum=0.804;QD=16.36;ReadPosRankSum=1.039;VQSLOD=3.6081;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,6:8:17.89:233,18,0	0/0:3,0:3:9.03:0,9,135	./.	0/1:18,0:6:23.57:24,0,100	0/0:3,0:3:9.03:0,9,135	0/0:5,0:5:12.04:0,12,180	0/0:24,0:24:69.11:0,69,960	0/0:9,0:8:21.07:0,21,315	0/0:12,0:12:36.12:0,36,539	0/0:3,0:3:9.03:0,9,135	0/0:3,0:3:6.02:0,6,90	0/0:6,0:6:15.05:0,15,225	0/0:7,0:7:18.06:0,18,268	0/0:15,0:15:42.14:0,42,628	0/0:6,0:6:15.05:0,15,225	0/0:7,0:7:21.07:0,21,315	1/1:0,13:13:39.13:506,39,0	0/0:10,0:10:30.08:0,30,428	0/0:9,0:8:24.05:0,24,334	0/0:2,0:2:3.01:0,3,45	0/0:46,0:46:99:0,133,1828	0/0:5,0:5:15.05:0,15,224	./.	0/0:23,0:23:51:0,51,690	0/0:5,0:5:12.03:0,12,161	0/0:9,0:9:18.06:0,18,270	0/0:9,0:9:27.09:0,27,404	0/0:3,0:2:6.02:0,6,90
chr10	94553571	.	T	TA	4716.24	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=2.673;DP=494;FS=7.152;HRun=8;HaplotypeScore=57.0096;InbreedingCoeff=0.9191;MQ=75.74;MQ0=1;MQRankSum=-2.144;QD=23.23;ReadPosRankSum=1.868;VQSLOD=5.4572;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,2:27:59.79:325,60,0	0/0:11,0:11:33.02:0,33,302	0/0:16,0:16:29.82:0,30,248	0/0:10,0:9:2.08:0,2,77	0/0:31,0:31:84.02:0,84,760	1/1:1,14:15:42.12:485,42,0	1/1:2,16:18:42.12:485,42,0	0/0:37,0:37:99:0,99,897	0/0:18,0:18:48.01:0,48,435	1/1:4,20:24:60.14:662,60,0	1/1:3,19:22:57.17:658,57,0	1/1:2,9:11:3.34:285,3,0	1/1:3,11:14:21.06:242,21,0	1/1:1,10:11:2.62:284,3,0	0/0:18,0:18:39.01:0,39,357	0/0:10,0:10:27.01:0,27,247	1/1:3,0:22:48.29:246,48,0	0/0:16,0:16:45.02:0,45,412	0/0:20,0:20:51.02:0,51,465	0/0:25,0:25:72.04:0,72,659	0/0:14,0:14:39:0,39,352	1/1:1,16:18:47.97:526,48,0	1/1:1,9:10:24.07:277,24,0	1/1:1,9:10:21.06:242,21,0	0/0:13,0:13:36.02:0,36,330	0/0:27,0:27:65.70:0,66,626	0/0:18,0:18:54:0,54,484	0/0:7,0:7:15.01:0,15,137
chr10	94554694	.	TAGTG	T	2856.71	PASS	AB=0.815;AC=10;AF=0.179;AN=56;BaseQRankSum=6.785;DP=633;FS=6.643;HRun=0;HaplotypeScore=113.0509;InbreedingCoeff=0.7165;MQ=79.73;MQ0=2;MQRankSum=2.578;QD=18.31;ReadPosRankSum=2.565;VQSLOD=2.5352;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:12.48:0,12,300	0/0:11,0:11:24.08:0,24,522	0/0:40,0:35:11.61:0,12,154	0/0:35,0:33:9.03:0,9,156	0/0:26,0:26:54.19:0,54,1239	0/1:31,0:31:18.01:18,0,961	0/0:23,0:23:30.10:0,30,705	0/0:24,0:24:35.97:0,36,530	0/0:16,0:16:33.11:0,33,779	0/0:14,0:22:36.12:0,36,620	0/0:10,0:16:27.09:0,27,505	0/0:25,0:25:36.11:0,36,778	0/0:24,0:24:60.21:0,60,1376	0/0:13,0:13:33.11:0,33,753	0/0:28,0:28:54.19:0,54,1243	0/0:18,0:18:33.11:0,33,740	0/0:24,0:24:12.04:0,12,198	0/0:3,0:12:21.05:0,21,323	1/1:12,4:15:12.04:189,12,0	1/1:7,13:20:36.12:565,36,0	1/1:14,20:34:51.17:801,51,0	0/0:13,0:13:24.08:0,24,520	0/0:10,0:10:18.06:0,18,419	0/0:28,0:28:63.22:0,63,1424	0/0:27,0:27:48.16:0,48,1107	0/1:12,17:29:62.95:744,0,63	1/1:7,19:26:44.83:706,45,0	0/0:4,0:11:21.07:0,21,363
chr10	94554734	.	G	GAGTGATGAATGA	1293.36	PASS	AB=0.924;AC=8;AF=0.143;AN=56;BaseQRankSum=0.916;DP=640;FS=5.075;HRun=0;HaplotypeScore=207.3955;InbreedingCoeff=0.0994;MQ=69.14;MQ0=7;MQRankSum=-6.166;QD=8.19;ReadPosRankSum=-2.816;VQSLOD=2.1480;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:5,21:30:22.03:817,0,22	0/0:13,0:13:36.12:0,36,1148	0/0:38,0:26:57.18:0,57,1235	0/0:27,0:19:52.38:0,52,1063	0/0:24,0:24:69.24:0,69,2085	0/0:29,0:29:84.25:0,84,2092	0/0:23,0:23:66.21:0,66,1715	0/1:34,0:34:99:207,0,1513	0/0:14,0:14:42.14:0,42,1373	0/1:21,0:21:21.68:22,0,811	0/1:20,0:19:69.21:69,0,764	0/0:17,0:17:48.16:0,48,1361	0/0:27,0:27:75.24:0,75,2155	0/0:18,0:18:54.17:0,54,1649	0/0:28,0:28:81.28:0,81,2244	0/0:19,0:19:57.20:0,57,1638	1/1:2,0:23:8.86:254,9,0	0/1:17,0:17:22.87:23,0,583	0/0:16,0:16:42.09:0,42,1011	0/0:22,0:21:59.57:0,60,1590	0/0:28,0:28:69.22:0,69,1938	0/0:12,0:12:30.10:0,30,931	0/0:14,0:14:39.13:0,39,1165	0/0:31,0:31:93.30:0,93,2941	0/0:20,0:20:57.20:0,57,1652	0/0:28,0:28:84.08:0,84,2014	0/0:34,0:34:86.83:0,87,2142	0/1:13,0:13:39.52:40,0,405
chr10	94555089	.	CGGGCTTCTCCCTCCCTGGTG	C	563.71	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.710;DP=639;FS=11.985;HRun=0;HaplotypeScore=291.6562;InbreedingCoeff=0.8913;MQ=64.33;MQ0=1;MQRankSum=-3.781;QD=7.23;ReadPosRankSum=2.207;VQSLOD=1.1022;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:9.03:342,9,0	0/0:8,0:8:24.08:0,24,1108	0/0:13,0:13:29.49:0,29,1006	0/0:16,0:15:36.10:0,36,1119	0/0:13,0:13:36.09:0,36,1492	0/0:22,0:22:63.19:0,63,3344	0/0:29,0:29:75.21:0,75,3548	0/0:24,0:24:51.09:0,51,1920	0/0:19,0:19:54.19:0,54,2900	0/0:22,0:22:60.20:0,60,2495	0/0:11,0:11:29.73:0,30,1178	0/0:39,0:39:99:0,108,4914	0/0:23,0:23:60.19:0,60,4169	0/0:30,0:30:87.28:0,87,5685	0/0:18,0:18:51.16:0,51,3037	0/0:23,0:23:69.24:0,69,5235	1/1:10,35:45:5.96:325,6,0	0/0:26,0:26:69.17:0,69,4927	0/0:24,0:24:57.07:0,57,1846	0/0:18,0:18:48.14:0,48,2169	0/0:64,0:63:99:0,166,8275	0/0:15,0:15:42.08:0,42,2344	0/0:12,0:12:33.11:0,33,1382	0/0:33,0:33:93.18:0,93,5621	0/0:20,0:20:57.20:0,57,2775	0/0:22,0:21:54:0,54,2671	0/0:13,0:13:36.12:0,36,2354	0/0:4,0:4:11.98:0,12,301
chr10	94555517	.	GA	G	2583.86	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.067;DP=579;FS=3.639;HRun=8;HaplotypeScore=61.0632;InbreedingCoeff=0.9669;MQ=81.13;MQ0=0;MQRankSum=-3.050;QD=22.67;ReadPosRankSum=2.734;VQSLOD=4.4345;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,1413	1/1:0,6:6:18.03:174,18,0	0/0:19,0:19:32.94:0,33,415	0/0:18,0:18:27.10:0,27,310	1/1:2,14:16:39.06:377,39,0	0/0:15,0:15:45.13:0,45,534	0/0:33,0:33:87.25:0,87,1039	0/0:18,0:18:48.13:0,48,560	1/1:4,14:18:42.06:406,42,0	0/0:21,0:21:54.16:0,54,642	0/0:14,0:14:36.10:0,36,425	0/0:15,0:15:36.10:0,36,423	0/0:17,0:17:51.16:0,51,616	0/0:15,0:15:39.12:0,39,471	1/1:3,18:21:48.08:463,48,0	1/1:2,15:17:42.06:406,42,0	0/0:38,0:38:99:0,102,1206	1/1:1,20:21:60.09:579,60,0	0/0:28,0:29:77.98:0,78,869	0/0:28,0:28:72.22:0,72,869	0/0:21,0:21:57.17:0,57,689	0/0:25,0:25:66.20:0,66,792	0/0:12,0:12:30.09:0,30,362	0/0:19,0:19:57.17:0,57,678	1/1:2,13:15:39.06:377,39,0	0/0:36,0:36:99:0,105,1218	0/0:29,0:29:81.22:0,81,955	0/0:1,0:1:3.01:0,3,36
chr10	94555696	.	TCACACACA	T	3463.26	PASS	AB=0.789;AC=27;AF=0.563;AN=48;BaseQRankSum=3.861;DP=483;FS=10.246;HRun=0;HaplotypeScore=129.6696;InbreedingCoeff=0.7010;MQ=68.40;MQ0=12;MQRankSum=-7.849;QD=15.67;ReadPosRankSum=-2.017;VQSLOD=2.0240;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:30.10:0,30,715	1/1:5,2:7:6.02:149,6,0	./.	0/0:31,0:19:0:0,0,0	1/1:9,2:10:6.02:149,6,0	0/0:13,0:13:15.05:0,15,501	0/0:19,0:19:15.03:0,15,514	./.	1/1:14,5:19:15.05:372,15,0	./.	1/1:7,0:11:6.02:112,6,0	0/0:8,0:11:12.02:0,12,196	0/0:9,0:14:15.85:0,16,123	0/0:11,0:18:4.99:0,5,211	1/1:9,9:19:27.09:651,27,0	1/1:3,6:10:18.06:428,18,0	0/0:18,0:27:31.46:0,31,770	1/1:13,2:15:6.02:149,6,0	1/1:11,0:12:6.02:104,6,0	1/1:11,0:21:21.07:391,21,0	1/1:35,0:34:0.82:1,1,0	0/1:11,0:15:6.87:7,0,99	0/0:5,0:12:5.03:0,5,169	0/0:21,0:29:5.05:0,5,167	1/1:10,7:16:18.06:447,18,0	1/1:10,0:12:9.03:168,9,0	1/1:11,0:16:18.06:335,18,0	./.
chr10	94556626	.	CTT	C	1520.95	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=-6.372;DP=380;FS=2.638;HRun=14;HaplotypeScore=58.0437;InbreedingCoeff=0.8041;MQ=77.86;MQ0=11;MQRankSum=2.234;QD=17.69;ReadPosRankSum=2.950;VQSLOD=2.9957;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,7:6:15.01:139,15,0	0/0:40,0:24:15.65:0,16,239	0/0:25,0:16:7:0,7,78	1/1:3,11:14:32.95:294,33,0	0/0:5,0:19:33.50:0,33,320	0/0:0,0:8:15.02:0,15,143	0/0:6,0:23:47.26:0,47,450	1/1:3,5:8:11.96:111,12,0	0/0:5,0:11:14.97:0,15,52	0/0:6,0:15:16.85:0,17,117	0/0:1,0:5:9.01:0,9,86	0/0:3,0:11:18.02:0,18,170	0/0:3,0:4:6.01:0,6,70	1/1:2,11:14:32.51:273,33,0	1/1:1,14:15:33.02:305,33,0	0/0:9,0:9:0.89:0,1,2	1/1:2,14:16:41.69:362,42,0	0/0:15,0:18:2.50:0,3,89	0/0:6,0:9:15.31:0,15,97	0/0:1,0:6:12.48:0,12,43	0/0:3,0:2:3.01:0,3,37	0/0:6,0:8:15:0,15,161	0/0:3,0:8:6.01:0,6,57	1/1:1,9:9:24.02:222,24,0	0/0:7,0:19:18.66:0,19,160	0/0:9,0:18:6.64:0,7,74	0/0:1,0:10:15.02:0,15,144
chr10	94557175	.	GA	G	8868.19	PASS	AB=0.958;AC=40;AF=0.714;AN=56;BaseQRankSum=6.754;DP=613;FS=3.113;HRun=10;HaplotypeScore=71.1231;InbreedingCoeff=0.8428;MQ=79.03;MQ0=0;MQRankSum=-0.540;QD=19.20;ReadPosRankSum=5.629;VQSLOD=5.4304;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:3,33:36:95.96:833,96,0	1/1:1,10:11:26.99:234,27,0	0/1:20,2:21:3.37:3,0,247	0/1:20,0:19:22.13:22,0,203	1/1:2,25:27:74.98:651,75,0	1/1:4,22:26:62.97:547,63,0	1/1:3,25:28:68.97:599,69,0	1/1:11,27:38:74.94:650,75,0	1/1:2,16:18:41.99:365,42,0	0/0:24,0:24:60.16:0,60,664	0/0:15,1:17:15.91:0,16,386	1/1:1,20:21:59.99:521,60,0	1/1:2,5:7:15:130,15,0	1/1:1,22:23:59.99:521,60,0	1/1:2,19:21:44.99:390,45,0	1/1:5,7:12:17.98:156,18,0	1/1:1,40:41:99:988,114,0	1/1:0,18:18:47.99:417,48,0	0/0:22,0:22:57.15:0,57,630	0/0:20,0:20:45.11:0,45,490	0/0:21,0:22:47.18:0,47,549	1/1:3,16:19:11.68:331,12,0	1/1:2,13:15:35.99:311,36,0	1/1:1,31:32:80.98:703,81,0	1/1:2,15:17:35.99:313,36,0	0/0:25,0:25:60.16:0,60,662	0/0:21,0:21:34.52:0,35,587	1/1:2,7:9:20.99:182,21,0
chr10	94557344	.	TTTAATTAGGG	T	9573.15	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.030;DP=618;FS=15.918;HRun=0;HaplotypeScore=185.8721;InbreedingCoeff=0.9856;MQ=56.13;MQ0=6;MQRankSum=-15.043;QD=82.53;ReadPosRankSum=1.214;VQSLOD=3.5278;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,6105	1/1:0,6:6:15.05:500,15,0	0/0:9,0:5:12.04:0,12,504	0/0:10,0:4:11.97:0,12,452	1/1:2,17:19:51.18:1630,51,0	0/0:32,0:32:92.13:0,92,4709	0/0:14,0:14:42.13:0,42,2076	0/0:34,0:34:93.32:0,93,4686	1/1:1,14:15:27.09:896,27,0	0/0:34,0:34:99:0,99,5065	0/0:18,0:18:51.18:0,51,2524	0/0:22,0:22:66.23:0,66,3469	0/0:22,0:22:63.22:0,63,3132	0/0:16,0:16:48.16:0,48,2492	1/1:0,19:19:51.18:1701,51,0	1/1:0,21:21:53.94:1800,54,0	0/0:31,0:31:87.30:0,87,4158	1/1:3,13:16:39.13:1246,39,0	0/0:33,0:32:81.27:0,81,3732	0/0:25,0:24:69.24:0,69,3547	0/0:34,0:34:99:0,102,5380	0/0:30,0:30:84.29:0,84,4157	0/0:22,0:22:63.22:0,63,3061	0/0:18,0:18:54.19:0,54,2591	1/1:1,19:20:54.19:1801,54,0	0/0:16,0:16:45.15:0,45,2349	0/0:30,0:29:90.29:0,90,4229	0/0:12,0:12:36.12:0,36,1700
chr10	94558035	.	TCAC	T	17921.70	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=11.792;DP=668;FS=4.961;HRun=0;HaplotypeScore=110.1854;InbreedingCoeff=0.9979;MQ=76.01;MQ0=0;MQRankSum=-6.227;QD=38.21;ReadPosRankSum=4.999;VQSLOD=5.9741;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:60.21:998,60,0	1/1:0,11:11:18.06:300,18,0	0/0:23,0:23:68.57:0,69,1447	0/0:24,0:23:40.06:0,40,1354	1/1:1,18:19:27.09:447,27,0	1/1:1,23:24:63.19:1020,63,0	1/1:1,22:23:57.19:949,57,0	1/1:5,31:36:90.27:1418,90,0	1/1:3,30:33:63.21:1047,63,0	0/0:18,0:18:48.16:0,48,1087	0/0:11,0:11:27.09:0,27,576	1/1:3,31:34:75.25:1228,75,0	1/1:0,19:19:51.17:847,51,0	1/1:0,24:24:63.22:1049,63,0	1/1:3,31:34:81.28:1343,81,0	1/1:2,22:24:51.17:850,51,0	1/1:3,35:38:90.31:1499,90,0	1/1:0,19:19:54.18:900,54,0	0/0:23,0:23:59.55:0,60,1175	0/0:13,0:13:36.12:0,36,816	0/0:50,0:50:99:0,127,3094	1/1:1,22:23:57.19:943,57,0	1/1:0,16:16:42.14:695,42,0	1/1:2,32:34:84.29:1396,84,0	1/1:0,13:13:33.11:544,33,0	0/0:8,0:8:24.08:0,24,528	0/0:29,0:29:81.28:0,81,1818	1/1:0,13:13:27.09:448,27,0
chr10	94559755	.	C	CA	7237.39	PASS	AB=0.938;AC=36;AF=0.643;AN=56;BaseQRankSum=5.480;DP=628;FS=1.851;HRun=0;HaplotypeScore=127.9821;InbreedingCoeff=0.8609;MQ=57.75;MQ0=8;MQRankSum=-2.310;QD=18.42;ReadPosRankSum=1.568;VQSLOD=6.9428;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1529	1/1:1,7:8:20.49:225,20,0	0/1:5,0:2:6.02:6,0,9	0/1:6,0:5:31:31,0,48	1/1:2,28:30:60.51:639,61,0	1/1:26,1:29:67.46:566,67,0	1/1:25,2:25:44.48:365,44,0	1/1:28,0:28:61.27:387,61,0	1/1:1,24:25:58.05:664,58,0	0/0:28,0:27:72.21:0,72,983	0/0:18,0:18:45.15:0,45,626	1/1:27,0:27:16.72:348,17,0	1/1:10,0:10:26.28:214,26,0	1/1:25,0:27:65.41:464,65,0	1/1:1,14:15:27.08:304,27,0	1/1:2,16:18:45.60:513,46,0	0/0:21,0:21:63.11:0,63,805	1/1:2,26:27:53.10:621,53,0	0/0:17,0:14:39.10:0,39,500	0/0:18,0:18:48.16:0,48,664	0/0:35,0:35:81.26:0,81,1102	1/1:20,0:20:25.37:269,25,0	1/1:13,1:15:15.28:189,15,0	1/1:30,0:31:71.78:546,72,0	1/1:10,18:28:65.84:692,66,0	0/0:36,0:36:99:0,108,1443	0/0:23,0:23:63.20:0,63,860	1/1:13,0:14:26.64:193,27,0
chr10	94559764	.	GAA	G	4997.83	PASS	AB=0.952;AC=15;AF=0.268;AN=56;BaseQRankSum=-11.892;DP=666;FS=1.105;HRun=10;HaplotypeScore=151.5154;InbreedingCoeff=0.9147;MQ=59.34;MQ0=7;MQRankSum=4.037;QD=24.38;ReadPosRankSum=0.401;VQSLOD=3.0600;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:43:99:0,126,1865	0/0:8,0:8:24.08:0,24,376	0/0:7,0:4:11.71:0,12,151	0/0:8,0:6:15.01:0,15,189	0/0:27,0:27:66.22:0,66,1036	0/0:25,0:26:61.17:0,61,397	0/0:23,0:26:67.26:0,67,470	0/0:33,0:37:80.08:0,80,439	0/0:25,0:25:66.16:0,66,1006	1/1:0,34:33:93.20:1013,93,0	1/1:1,19:20:54.14:593,54,0	0/0:25,0:27:71.94:0,72,499	0/0:12,0:13:27.46:0,27,182	0/0:27,0:29:65.63:0,66,501	0/0:17,0:17:36.11:0,36,545	0/0:20,0:20:55.16:0,55,753	0/0:21,0:21:51.17:0,51,804	0/0:29,0:28:60.12:0,60,842	1/1:2,20:19:57.12:614,57,0	1/1:1,18:19:39.04:418,39,0	1/1:2,28:30:54.14:601,54,0	0/0:20,0:21:52.68:0,53,325	0/0:16,0:18:41.82:0,42,254	0/0:33,0:33:77.07:0,77,515	0/0:24,0:25:63:0,63,838	1/1:4,34:38:99:1118,102,0	1/1:1,21:22:57.15:634,57,0	0/1:19,0:20:7.01:7,0,107
chr10	94559765	.	A	AG	2274.92	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=5.044;DP=661;FS=1.532;HRun=1;HaplotypeScore=146.6131;InbreedingCoeff=0.9308;MQ=59.41;MQ0=6;MQRankSum=-1.711;QD=9.17;ReadPosRankSum=0.893;VQSLOD=1.3030;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,1657	0/0:8,0:8:24.07:0,24,276	0/0:7,0:4:11.63:0,12,134	0/0:8,0:6:8.76:0,9,86	0/0:27,0:27:72.08:0,72,708	1/1:26,1:27:30.13:250,30,0	1/1:26,0:26:22.36:208,22,0	1/1:5,32:37:67.34:819,67,0	0/0:25,0:25:65.77:0,66,735	0/0:34,0:33:91.29:0,91,575	0/0:20,0:20:58.75:0,59,374	1/1:27,0:27:38.88:195,39,0	1/1:12,0:12:2.21:18,2,0	1/1:29,0:29:30.68:191,31,0	0/0:17,0:17:36.07:0,36,401	0/0:20,0:20:32.43:0,32,499	0/0:21,0:21:63.08:0,63,799	0/0:29,0:28:60.62:0,61,610	0/0:22,0:19:44.41:0,44,291	0/0:19,0:19:49.65:0,50,323	0/0:30,0:30:61.91:0,62,398	1/1:21,0:21:26.23:169,26,0	1/1:18,0:18:9.07:116,9,0	1/1:32,0:32:43.35:252,43,0	0/0:24,0:24:51.47:0,51,538	0/0:38,0:38:99:0,109,707	0/0:21,0:21:56.05:0,56,361	1/1:3,16:19:6.01:268,6,0
chr10	94560456	.	AG	A	2164.59	PASS	AB=0.909;AC=19;AF=0.339;AN=56;BaseQRankSum=-2.091;DP=541;FS=2.860;HRun=11;HaplotypeScore=80.7393;InbreedingCoeff=0.7599;MQ=78.56;MQ0=6;MQRankSum=0.791;QD=11.33;ReadPosRankSum=7.173;VQSLOD=3.1621;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:26.53:0,27,262	0/0:1,0:3:5.72:0,6,29	0/0:42,0:25:15.76:0,16,235	0/0:35,0:31:44.02:0,44,359	0/0:14,0:21:5.83:0,6,38	1/1:8,18:26:44.92:369,45,0	0/0:11,1:12:5.25:0,5,227	0/0:15,0:18:11.39:0,11,87	0/0:7,0:14:6.93:0,7,32	1/1:16,0:18:0.45:1,0,0	0/0:6,0:8:5.91:0,6,48	1/1:3,12:15:35.95:294,36,0	1/1:5,14:19:35.95:295,36,0	1/1:9,12:21:47.79:382,48,0	0/0:8,0:20:5.68:0,6,29	0/0:15,0:27:8.48:0,8,42	1/1:4,9:16:24.09:165,24,0	0/0:9,0:17:22.91:0,23,121	0/1:18,1:20:6.17:6,0,313	0/0:18,0:18:8.72:0,9,153	0/0:19,0:18:26.83:0,27,253	1/1:8,16:24:50.75:402,51,0	1/1:9,9:18:17.93:144,18,0	1/1:3,10:14:37.98:301,38,0	0/0:12,0:14:5.78:0,6,33	0/0:21,0:20:29.89:0,30,270	0/0:27,1:28:23.47:0,23,430	0/0:2,0:5:8.52:0,9,43
chr10	94562810	.	T	TC	889.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.080;DP=750;FS=7.870;HRun=4;HaplotypeScore=99.5600;InbreedingCoeff=0.9445;MQ=69.15;MQ0=0;MQRankSum=0.494;QD=29.66;ReadPosRankSum=1.681;VQSLOD=3.3002;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:67,0:67:99:0,193,2167	0/0:10,0:10:30.07:0,30,328	0/0:26,0:23:36.24:0,36,613	0/0:29,0:29:75.07:0,75,818	0/0:25,0:25:75.21:0,75,850	0/0:31,0:31:84.21:0,84,935	0/0:32,0:32:90.21:0,90,992	0/0:32,0:32:87.23:0,87,977	0/0:27,0:27:81.22:0,81,911	0/0:23,0:23:60.15:0,60,665	0/0:14,0:14:42.06:0,42,452	0/0:29,0:29:78.18:0,78,855	0/0:31,0:31:90.26:0,90,1020	0/0:21,0:21:63.16:0,63,704	0/0:34,0:34:99:0,102,1157	0/0:33,0:33:84.23:0,84,945	1/1:0,30:30:72.24:985,72,0	0/0:32,0:32:93.27:0,93,1055	0/0:17,0:17:42.07:0,42,452	0/0:14,0:14:36.05:0,36,384	0/0:50,0:50:99:0,147,1648	0/0:24,0:24:72.18:0,72,799	0/0:22,0:22:63.08:0,63,676	0/0:27,0:27:78.21:0,78,876	0/0:27,0:27:69.19:0,69,782	0/0:21,0:21:54.15:0,54,613	0/0:19,0:19:45.09:0,45,489	0/0:3,0:3:9.03:0,9,102
chr10	94563261	.	CG	C	5471.62	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.526;DP=360;FS=2.387;HRun=2;HaplotypeScore=85.2649;InbreedingCoeff=0.6447;MQ=43.80;MQ0=13;MQRankSum=-0.543;QD=16.24;ReadPosRankSum=2.947;VQSLOD=5.1987;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,2:9:17.81:124,18,0	1/1:4,7:11:32.89:266,33,0	0/0:8,0:3:2.84:0,3,9	0/0:12,0:5:1.18:0,1,21	1/1:11,4:15:32.72:243,33,0	1/1:5,5:10:20.83:158,21,0	1/1:4,2:7:17.92:142,18,0	1/1:4,3:6:17.89:137,18,0	1/1:7,5:10:29.60:213,30,0	1/1:0,16:16:32.84:257,33,0	1/1:11,5:16:17.91:138,18,0	1/1:7,7:12:35.60:272,36,0	1/1:13,4:15:38.62:283,39,0	1/1:6,5:11:29.77:223,30,0	1/1:4,1:4:8.94:70,9,0	1/1:8,7:10:29.82:234,30,0	1/1:10,1:9:23.88:184,24,0	1/1:11,5:13:36.72:282,37,0	1/1:10,1:11:26.81:200,27,0	1/1:12,4:15:44.46:310,44,0	1/1:14,1:11:20.82:156,21,0	1/1:11,5:16:38.63:276,39,0	1/1:0,9:9:5.98:47,6,0	1/1:15,3:17:26.80:201,27,0	1/1:4,7:11:32.80:251,33,0	1/1:1,15:16:35.86:282,36,0	1/1:12,5:17:50.58:373,51,0	1/1:5,4:6:17.96:148,18,0
chr10	94563262	.	GGAAAAAAAA	G	9660.64	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-1.195;DP=357;FS=1.260;HRun=0;HaplotypeScore=115.5470;InbreedingCoeff=0.5802;MQ=43.93;MQ0=13;MQRankSum=-1.074;QD=28.92;ReadPosRankSum=2.606;VQSLOD=4.5593;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:8:17.55:123,18,0	1/1:11,0:11:33:591,33,0	0/0:8,0:3:7.56:0,8,92	0/0:15,0:5:3.25:0,3,130	1/1:15,0:15:32.03:336,32,0	1/1:10,0:10:20.66:347,21,0	1/1:6,0:6:17.98:330,18,0	1/1:9,0:8:20.21:287,20,0	1/1:12,0:10:29.68:448,30,0	1/1:16,0:16:32.86:351,33,0	1/1:5,11:16:17.72:324,18,0	1/1:14,0:12:35.79:671,36,0	1/1:16,0:14:38.80:466,39,0	1/1:10,0:10:29.85:458,30,0	1/1:5,0:4:8.96:121,9,0	1/1:14,0:10:29.90:461,30,0	0/1:11,0:9:72.01:72,0,190	1/1:16,0:13:36.76:470,37,0	1/1:15,0:14:34.42:282,34,0	1/1:15,1:15:44.66:584,45,0	1/1:12,0:8:20.84:205,21,0	1/1:16,0:16:38.45:415,38,0	1/1:9,0:9:5.69:137,6,0	1/1:18,0:17:26.10:253,26,0	1/1:12,0:12:32.59:615,33,0	1/1:17,0:16:32:369,32,0	1/1:17,0:17:50.65:607,51,0	1/1:9,0:6:18.01:336,18,0
chr10	94563273	.	AAAAAAAAAAAAAG	A	5707.60	PASS	AB=0.989;AC=25;AF=0.446;AN=56;BaseQRankSum=11.458;DP=439;FS=76.170;HRun=0;HaplotypeScore=181.6188;InbreedingCoeff=-0.6373;MQ=47.19;MQ0=17;MQRankSum=-7.431;QD=16.08;ReadPosRankSum=11.163;VQSLOD=0.3080;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:74.47:0,74,1060	0/1:10,0:10:10.88:536,0,11	0/0:17,0:4:11.25:0,11,333	0/0:17,0:6:6.18:0,6,209	0/1:14,0:14:90.56:114,0,91	0/1:12,1:13:79.66:259,0,80	0/1:11,1:11:48.68:265,0,49	0/1:19,0:18:11.07:394,0,11	0/1:16,0:14:98.57:292,0,99	0/1:17,1:18:99:104,0,225	0/1:16,0:16:59.14:160,0,59	0/1:17,0:15:62.11:531,0,62	0/1:14,0:12:38.12:303,0,38	0/1:12,0:12:58.96:302,0,59	0/1:8,0:7:45.83:46,0,92	0/1:14,0:9:32.95:266,0,33	0/0:22,0:19:22.83:0,23,1434	0/1:17,1:15:86.15:295,0,86	0/1:15,0:15:57.09:57,0,182	0/1:19,0:18:99:273,0,140	0/1:11,0:7:40.76:41,0,85	0/1:22,0:21:99:206,0,138	0/1:8,0:7:2.05:119,0,2	0/1:18,0:17:75.41:75,0,97	0/1:16,0:16:76.13:476,0,76	0/1:16,0:14:99:141,0,202	0/1:18,0:18:99:184,0,220	1/1:11,0:8:13.83:269,14,0
chr10	94563274	.	AAAAAAAAAAAAG	A	8500.70	PASS	AB=0.987;AC=39;AF=0.696;AN=56;BaseQRankSum=5.922;DP=447;FS=65.452;HRun=0;HaplotypeScore=171.3174;InbreedingCoeff=0.1214;MQ=47.41;MQ0=17;MQRankSum=-4.387;QD=23.48;ReadPosRankSum=5.761;VQSLOD=1.8919;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:45.62:0,46,682	1/1:7,3:10:20.14:627,20,0	0/0:17,0:4:10.85:0,11,302	0/0:17,0:6:7.63:0,8,167	0/1:15,0:15:21.02:279,0,21	1/1:16,0:16:6.41:433,6,0	1/1:14,0:13:18.92:414,19,0	1/1:17,1:17:41.75:549,42,0	1/1:17,0:14:11.23:473,11,0	0/1:17,0:17:99:116,0,103	0/1:13,0:13:14.68:220,0,15	1/1:14,2:15:17.34:710,17,0	1/1:11,2:13:13.58:384,14,0	1/1:13,0:13:21.58:526,22,0	0/1:9,0:8:7.43:132,0,7	1/1:18,0:13:4.19:431,4,0	0/0:22,0:19:22.04:0,22,1246	1/1:19,0:16:2.17:394,2,0	0/1:15,0:15:71.69:119,0,72	0/1:16,1:16:78.71:330,0,79	0/1:11,0:7:34.52:56,0,35	1/1:19,1:19:0.75:322,1,0	1/1:7,0:6:3.55:199,4,0	1/1:22,0:21:13.78:184,14,0	1/1:15,1:16:24.75:718,25,0	0/1:15,1:14:99:158,0,102	0/1:18,0:18:76.13:271,0,76	1/1:12,0:9:19.40:457,19,0
chr10	94563275	.	AAAAAAAAAAAG	A	10455.66	PASS	AB=0.971;AC=48;AF=0.857;AN=56;BaseQRankSum=0.419;DP=429;FS=33.732;HRun=0;HaplotypeScore=153.8311;InbreedingCoeff=0.5569;MQ=48.92;MQ0=16;MQRankSum=-2.493;QD=28.03;ReadPosRankSum=0.211;VQSLOD=2.8376;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:27:4.81:5,0,327	1/1:6,4:10:30.01:604,30,0	0/0:17,0:4:10.85:0,11,274	0/0:17,0:6:7.28:0,7,156	1/1:11,5:16:23.69:349,24,0	1/1:11,4:15:34.66:501,35,0	1/1:13,1:13:35.94:498,36,0	1/1:2,15:16:47.98:583,48,0	1/1:9,5:13:35.82:551,36,0	1/1:18,0:18:10.28:239,10,0	1/1:13,0:13:15.43:374,15,0	1/1:10,5:15:44.90:780,45,0	1/1:11,2:13:38.85:515,39,0	1/1:7,5:12:32.88:536,33,0	1/1:8,1:9:23.68:232,24,0	1/1:11,6:13:32.68:512,33,0	0/0:22,0:19:0.85:0,1,1038	1/1:11,4:13:29.57:447,30,0	1/1:14,0:14:18.33:222,18,0	1/1:17,0:16:9.55:551,10,0	1/1:11,0:8:9.68:131,10,0	1/1:14,4:17:35.14:463,35,0	1/1:7,1:7:7.95:182,8,0	1/1:16,3:18:30.46:289,30,0	1/1:11,6:17:43.92:782,44,0	0/1:15,1:14:24.08:156,0,24	1/1:13,0:13:5.96:469,6,0	1/1:9,4:10:25.81:485,26,0
chr10	94563276	.	AAAAAAAAAAG	A	10301.93	PASS	AB=0.983;AC=50;AF=0.893;AN=56;BaseQRankSum=0.664;DP=410;FS=5.723;HRun=0;HaplotypeScore=142.2158;InbreedingCoeff=0.5241;MQ=49.47;MQ0=15;MQRankSum=-0.550;QD=27.40;ReadPosRankSum=-0.210;VQSLOD=4.1804;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,1:27:72.59:84,0,73	1/1:10,0:10:30.01:552,30,0	0/0:17,0:4:10.57:0,11,233	0/0:17,0:6:7.23:0,7,152	1/1:17,0:17:36.59:379,37,0	1/1:15,0:15:36.85:491,37,0	1/1:13,2:14:38.93:495,39,0	1/1:17,0:16:47.98:540,48,0	1/1:13,0:12:35.95:512,36,0	1/1:16,1:17:30.59:349,31,0	1/1:8,5:13:21:357,21,0	1/1:14,1:15:44.75:703,45,0	1/1:13,0:13:38.85:468,39,0	1/1:12,0:12:32.90:496,33,0	1/1:9,0:9:25.75:241,26,0	1/1:17,0:13:32.76:508,33,0	0/1:23,0:20:24.89:25,0,837	1/1:14,0:12:29.77:416,30,0	1/1:0,11:11:32.14:340,32,0	1/1:11,4:14:33.42:521,33,0	1/1:8,1:7:17.55:154,18,0	1/1:16,0:15:38.78:446,39,0	1/1:6,0:5:8.92:169,9,0	1/1:17,0:16:26.77:266,27,0	1/1:15,1:16:44.80:713,45,0	1/1:14,0:12:5.88:192,6,0	1/1:6,5:11:29.94:468,30,0	1/1:12,0:10:26.18:416,26,0
chr10	94563293	.	AGC	A	1587.90	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=5.976;DP=462;FS=31.377;HRun=0;HaplotypeScore=128.0654;InbreedingCoeff=0.0114;MQ=51.00;MQ0=13;MQRankSum=-1.759;QD=3.78;ReadPosRankSum=8.786;VQSLOD=0.6488;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,1:26:22.65:207,23,0	0/1:11,0:11:10.54:19,0,11	0/0:19,0:7:21.02:0,21,331	0/1:23,0:13:2.26:2,0,271	1/1:20,1:21:24.70:114,25,0	1/1:17,0:17:28.08:144,28,0	1/1:18,0:16:25.04:88,25,0	0/0:23,0:22:15.52:0,16,142	0/1:15,0:14:0.49:54,0,0	0/1:17,0:17:13.29:56,0,13	1/1:10,0:10:11.33:44,11,0	1/1:20,0:20:20.84:82,21,0	0/1:17,0:17:13.97:58,0,14	1/1:19,0:18:7.61:116,8,0	0/1:12,0:12:10.60:21,0,11	1/1:14,1:11:16.30:69,16,0	1/1:19,0:18:16.63:78,17,0	0/1:18,0:18:2.77:45,0,3	0/1:19,0:16:32.79:33,0,92	1/1:11,1:12:18.76:93,19,0	0/1:11,0:9:5.07:5,0,34	0/1:20,0:19:21.70:66,0,22	0/1:8,0:7:12.19:52,0,12	0/1:19,0:18:25.77:26,0,27	1/1:16,0:16:22.43:84,22,0	1/1:8,0:8:11.94:57,12,0	1/1:16,0:16:21.81:91,22,0	0/1:13,0:13:26.56:49,0,27
chr10	94563969	.	GAA	G	4423.88	PASS	AB=0.605;AC=39;AF=0.696;AN=56;BaseQRankSum=0.272;DP=563;FS=3.144;HRun=14;HaplotypeScore=91.7185;InbreedingCoeff=0.7068;MQ=58.33;MQ0=14;MQRankSum=0.176;QD=10.53;ReadPosRankSum=4.725;VQSLOD=3.9239;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:40:94.64:0,95,1039	0/0:1,0:7:9.98:0,10,35	0/0:28,0:13:17.77:0,18,162	0/0:24,0:9:10.35:0,10,87	0/0:4,1:18:5.99:0,6,87	1/1:5,15:21:13.96:292,14,0	1/1:3,22:26:41.75:372,42,0	1/1:10,1:29:19.88:169,20,0	0/0:3,0:10:15.48:0,15,70	1/1:1,0:14:27.51:132,28,0	1/1:5,0:19:21.94:120,22,0	1/1:4,5:9:9.19:107,9,0	1/1:4,12:16:9.68:227,10,0	1/1:3,8:11:18:166,18,0	0/1:6,3:17:34.66:57,0,35	0/0:6,0:13:22.97:0,23,111	1/1:13,20:33:44.58:557,45,0	0/1:12,3:28:39.24:39,0,108	1/1:3,0:10:17.68:74,18,0	1/1:5,1:19:35.26:151,35,0	1/1:1,0:5:7.28:34,7,0	1/1:5,15:19:24.59:269,25,0	1/1:3,12:15:34.81:310,35,0	1/1:6,18:25:35.87:379,36,0	1/1:8,21:28:47.48:444,47,0	1/1:4,1:21:38.57:203,39,0	1/1:4,0:25:54.84:236,55,0	0/1:4,1:13:0.67:86,0,1
chr10	94564039	.	T	TC	652	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.400;DP=553;FS=4.118;HRun=6;HaplotypeScore=79.1729;InbreedingCoeff=0.9743;MQ=68.45;MQ0=1;MQRankSum=-1.276;QD=26.08;ReadPosRankSum=1.041;VQSLOD=3.9918;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.13:0,60,610	0/0:12,0:12:30.06:0,30,306	0/0:16,0:15:36.04:0,36,349	0/0:17,0:17:30.07:0,30,377	0/0:35,0:35:93.20:0,93,945	0/0:17,0:17:48.04:0,48,467	0/0:21,0:21:60.10:0,60,597	0/0:40,1:41:51.08:0,51,520	0/0:13,0:13:30.06:0,30,306	0/0:14,0:14:33.07:0,33,337	0/0:23,0:22:63.14:0,63,640	0/0:7,0:7:18.03:0,18,182	0/0:16,0:16:33.05:0,33,326	0/0:12,0:12:33.05:0,33,326	0/0:17,0:17:42.07:0,42,415	0/0:17,0:17:45.10:0,45,459	1/1:6,19:25:63.13:747,63,0	0/0:21,0:21:54.08:0,54,536	0/0:23,0:23:57.11:0,57,574	0/0:26,0:26:72.15:0,72,726	0/0:6,0:6:15.03:0,15,153	0/0:29,0:29:72.12:0,72,719	0/0:19,0:19:54.08:0,54,537	0/0:19,0:19:48.09:0,48,484	0/0:21,0:20:42.08:0,42,420	0/0:24,0:24:60.13:0,60,612	0/0:17,0:17:45.10:0,45,458	0/0:21,0:21:54.10:0,54,543
chr10	94564308	.	GA	G	2318.32	PASS	AB=0.702;AC=32;AF=0.571;AN=56;BaseQRankSum=6.130;DP=516;FS=0.914;HRun=15;HaplotypeScore=70.8314;InbreedingCoeff=0.2662;MQ=53.99;MQ0=11;MQRankSum=-0.114;QD=6.57;ReadPosRankSum=3.614;VQSLOD=2.8726;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,2:39:22.25:0,22,421	1/1:4,5:11:18.78:108,19,0	0/0:4,0:2:3:0,3,26	0/0:6,0:5:1.89:0,2,22	0/1:14,13:23:70.47:102,0,70	0/1:8,6:14:0.68:114,0,1	1/1:5,11:15:0.74:99,1,0	1/1:12,9:22:6.16:92,6,0	1/1:2,9:13:4.35:139,4,0	0/0:14,1:14:2.13:0,2,126	0/0:23,2:25:11.11:0,11,281	1/1:7,2:10:7.36:43,7,0	1/1:3,11:16:33.63:204,34,0	0/1:5,4:10:9.53:66,0,10	0/1:11,3:16:26.19:81,0,26	1/1:3,5:10:15.86:89,16,0	1/1:15,3:30:44.65:172,45,0	1/1:7,19:27:34.21:279,34,0	0/1:9,3:13:34.82:35,0,73	0/0:14,1:16:12.82:0,13,247	0/1:11,3:17:39.39:39,0,135	1/1:7,12:20:5.93:161,6,0	1/1:5,15:19:35.31:231,35,0	0/1:9,7:16:25.20:79,0,25	0/1:8,17:25:23.77:202,0,24	0/0:29,0:31:60.72:0,61,482	0/0:16,1:25:16.22:0,16,220	1/1:2,10:14:27.70:166,28,0
chr10	94565199	.	A	AG	431.95	PASS	AB=0.956;AC=16;AF=0.286;AN=56;BaseQRankSum=4.362;DP=603;FS=12.175;HRun=0;HaplotypeScore=144.8836;InbreedingCoeff=-0.2343;MQ=33.00;MQ0=39;MQRankSum=-2.424;QD=1.57;ReadPosRankSum=-0.408;VQSLOD=2.0684;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:26:44.17:0,44,296	0/1:7,4:11:9.30:18,0,9	0/0:35,0:6:11.89:0,12,66	0/0:37,0:4:3.53:0,4,39	0/1:40,0:38:32.09:32,0,123	0/1:18,0:17:24.80:25,0,120	0/1:18,0:15:38.11:78,0,38	0/1:26,0:22:92.55:93,0,132	0/1:7,3:8:35.74:36,0,47	0/0:30,0:25:63.23:0,63,471	0/0:32,0:31:74.62:0,75,453	0/1:18,0:17:60.07:60,0,74	0/1:19,0:18:19.22:19,0,105	0/1:9,0:9:46.45:46,0,47	0/1:12,0:12:7.15:83,0,7	0/1:20,0:18:13.65:14,0,157	0/0:23,0:22:55.66:0,56,395	0/1:13,1:12:25.03:25,0,73	0/0:23,0:17:41.97:0,42,251	0/0:24,0:22:54.61:0,55,353	0/0:9,0:9:14.53:0,15,117	0/1:21,0:20:15.92:16,0,100	0/1:28,0:26:7.10:7,0,183	1/1:10,0:10:8.82:38,9,0	0/0:19,0:18:3.08:0,3,19	0/0:21,0:16:41.59:0,42,250	0/0:30,0:25:59.67:0,60,386	0/0:15,0:9:5.33:0,5,108
chr10	94565201	.	A	AG	284.33	PASS	AB=0.980;AC=10;AF=0.179;AN=56;BaseQRankSum=3.479;DP=595;FS=0.546;HRun=0;HaplotypeScore=146.0006;InbreedingCoeff=0.2760;MQ=32.85;MQ0=39;MQRankSum=-0.264;QD=1.91;ReadPosRankSum=-3.107;VQSLOD=1.8184;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:25:14.45:0,14,215	1/1:9,2:11:3.45:70,3,0	0/0:37,0:6:11.81:0,12,77	0/0:38,0:4:6.75:0,7,53	0/1:34,3:36:4.19:117,0,4	0/0:18,0:17:20.06:0,20,120	0/0:17,0:15:21.45:0,21,112	0/0:26,0:22:15.18:0,15,137	0/1:10,0:8:4.76:5,0,39	0/0:30,0:25:40.77:0,41,350	0/0:32,0:31:26.34:0,26,289	0/0:19,0:17:20.96:0,21,171	0/0:19,0:18:24.01:0,24,177	0/0:9,0:9:15.42:0,15,94	1/1:11,0:12:13.05:110,13,0	0/1:19,1:18:11.27:64,0,11	0/0:22,0:21:52.95:0,53,357	0/1:14,0:12:13.03:25,0,13	0/0:24,0:18:26.73:0,27,197	0/0:24,0:22:18.99:0,19,209	0/0:10,0:10:10.25:0,10,92	0/0:20,0:19:28.10:0,28,172	0/1:24,0:23:12.31:12,0,145	0/0:10,0:10:9.89:0,10,40	0/1:20,0:19:8.01:24,0,8	0/0:20,0:15:29.27:0,29,202	0/0:30,0:25:54.24:0,54,363	0/0:12,0:6:8.78:0,9,66
chr10	94565203	.	ACAAAC	A	4973.65	PASS	AB=0.966;AC=31;AF=0.554;AN=56;BaseQRankSum=-13.229;DP=587;FS=28.759;HRun=0;HaplotypeScore=152.8696;InbreedingCoeff=-0.5349;MQ=32.89;MQ0=39;MQRankSum=1.783;QD=9.26;ReadPosRankSum=-11.920;VQSLOD=-0.1766;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:23:48.08:640,48,0	0/0:11,0:11:8.58:0,9,64	0/1:36,0:6:17.30:17,0,58	0/0:38,0:4:7.38:0,7,119	0/1:17,17:33:58.33:58,0,113	0/1:16,0:16:45.91:298,0,46	0/1:14,0:14:69.90:70,0,88	1/1:24,0:23:51.99:454,52,0	0/1:10,0:8:33.52:52,0,34	0/1:31,0:25:99:277,0,131	0/1:30,0:29:99:159,0,164	0/1:18,0:16:99:118,0,170	0/1:20,0:19:25.89:26,0,145	0/1:8,0:8:45.48:126,0,45	0/1:10,0:11:27.93:144,0,28	0/1:20,0:18:33.37:101,0,33	1/1:20,1:21:58.52:659,59,0	0/1:14,0:12:11.73:63,0,12	0/1:24,0:18:63.29:362,0,63	0/1:24,0:22:94.88:181,0,95	1/1:11,0:10:20.03:216,20,0	0/1:18,0:19:58.69:161,0,59	0/1:20,0:22:34.52:299,0,35	0/1:10,0:10:8.80:50,0,9	0/1:21,0:20:21.65:22,0,43	0/1:22,0:16:43.65:204,0,44	0/1:31,0:26:99:132,0,145	1/1:9,0:5:8.98:86,9,0
chr10	94565207	.	AC	A	5079.23	PASS	AB=0.988;AC=52;AF=0.929;AN=56;BaseQRankSum=-1.740;DP=632;FS=0.831;HRun=1;HaplotypeScore=139.4397;InbreedingCoeff=0.3154;MQ=33.29;MQ0=37;MQRankSum=1.092;QD=8.61;ReadPosRankSum=-2.387;VQSLOD=1.4326;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,1:26:54.24:378,54,0	1/1:11,0:11:16.20:71,16,0	0/1:39,1:7:19.19:19,0,53	0/0:42,0:7:2.46:0,2,59	1/1:35,0:33:52.63:262,53,0	1/1:19,0:17:41.33:239,41,0	1/1:18,1:17:31.82:146,32,0	1/1:28,0:25:57.95:303,58,0	1/1:12,0:10:22.13:116,22,0	1/1:30,0:24:45.92:313,46,0	1/1:30,1:30:51.96:317,52,0	1/1:23,0:21:39.81:185,40,0	1/1:24,0:23:9.87:85,10,0	1/1:11,0:11:24.03:136,24,0	1/1:12,0:12:28.47:157,28,0	1/1:19,0:17:31.64:188,32,0	1/1:22,0:21:54.81:353,55,0	1/1:11,0:10:25.45:139,25,0	1/1:29,0:22:12.07:215,12,0	1/1:25,1:24:36.03:260,36,0	1/1:11,0:10:17.53:111,18,0	1/1:20,1:21:16.44:153,16,0	1/1:23,1:23:49.87:281,50,0	0/1:12,0:12:0.31:37,0,0	1/1:24,0:23:7.93:60,8,0	1/1:23,1:18:40.16:219,40,0	1/1:29,2:26:50.07:282,50,0	1/1:11,0:6:10.73:55,11,0
chr10	94565213	.	A	AG	2496.94	PASS	AB=0.962;AC=28;AF=0.500;AN=56;BaseQRankSum=1.747;DP=666;FS=0.380;HRun=0;HaplotypeScore=150.6841;InbreedingCoeff=-0.4409;MQ=34.64;MQ0=38;MQRankSum=2.396;QD=4.68;ReadPosRankSum=4.427;VQSLOD=3.1737;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:26:28.58:187,0,29	0/1:11,0:11:3.88:51,0,4	0/0:48,0:7:13.86:0,14,103	0/0:48,0:8:4.63:0,5,59	0/1:36,1:36:78.22:129,0,78	0/1:19,0:17:36.16:130,0,36	0/1:19,0:17:4.45:174,0,4	0/1:33,0:31:99:175,0,106	0/1:12,0:11:6.32:94,0,6	0/1:30,0:24:84.52:85,0,148	0/1:30,0:29:86.52:150,0,87	1/1:22,0:22:27.45:237,27,0	0/1:15,11:25:40.66:41,0,96	1/1:13,0:13:5.42:144,5,0	1/1:11,0:11:11.71:136,12,0	0/1:21,0:19:29.44:29,0,62	0/0:26,0:25:55.20:0,55,319	1/1:11,0:10:16.32:88,16,0	0/1:22,9:24:99:163,0,182	0/1:25,0:23:89.95:90,0,100	0/1:11,0:10:13.82:66,0,14	0/1:23,0:23:53.67:138,0,54	0/1:20,0:20:80.16:107,0,80	0/0:11,0:11:2.06:0,2,63	0/1:23,1:23:20.31:38,0,20	0/1:25,0:20:89.23:148,0,89	0/1:32,0:27:36.39:36,0,159	0/1:12,0:7:12.35:23,0,12
chr10	94565214	.	A	AG	1723.98	PASS	AB=0.885;AC=28;AF=0.500;AN=56;BaseQRankSum=4.782;DP=664;FS=19.626;HRun=0;HaplotypeScore=149.3603;InbreedingCoeff=-0.5618;MQ=36.54;MQ0=37;MQRankSum=-0.159;QD=3.07;ReadPosRankSum=5.388;VQSLOD=1.6636;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:26:24.50:0,24,145	1/1:7,4:11:2.65:76,3,0	0/1:48,0:7:2.15:2,0,106	0/0:46,0:8:9.82:0,10,83	0/1:31,7:36:63.84:84,0,64	0/1:18,2:18:44.38:95,0,44	0/1:14,5:17:14.90:110,0,15	0/1:33,0:31:95.22:95,0,110	0/1:11,2:11:22.89:32,0,23	0/1:25,5:24:60.15:150,0,60	0/1:22,8:29:83.62:115,0,84	0/1:18,5:22:27.35:104,0,27	0/1:22,4:25:25.83:26,0,95	0/1:11,2:13:14.23:68,0,14	1/1:9,3:12:14.82:99,15,0	1/1:15,4:17:15.63:84,16,0	0/0:26,0:25:55.54:0,56,367	0/1:8,2:10:13.26:58,0,13	0/1:30,2:25:66.87:67,0,154	0/1:22,3:23:55.98:144,0,56	0/1:11,0:10:31.36:34,0,31	0/1:20,3:23:62.36:62,0,67	0/1:19,2:20:21.03:21,0,100	0/1:8,2:10:9.84:10,0,42	0/1:21,4:24:14.80:15,0,36	0/1:21,4:20:65.38:122,0,65	0/1:26,6:26:80.44:193,0,80	0/1:12,0:7:17.16:17,0,27
chr10	94565220	.	A	AC	4283.85	PASS	AB=0.846;AC=34;AF=0.607;AN=56;BaseQRankSum=-1.659;DP=659;FS=3.502;HRun=0;HaplotypeScore=138.2894;InbreedingCoeff=-0.2656;MQ=38.55;MQ0=34;MQRankSum=3.668;QD=7.87;ReadPosRankSum=6.592;VQSLOD=4.7215;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:25:26.10:180,0,26	1/1:8,4:12:0.28:106,0,0	0/0:45,0:6:10.44:0,10,69	0/0:45,0:9:6.91:0,7,88	0/1:29,7:34:82.71:193,0,83	1/1:16,2:16:3.60:198,4,0	0/1:16,5:19:2.21:199,0,2	0/1:31,0:29:45.52:331,0,46	1/1:12,2:12:7.22:153,7,0	0/1:24,4:22:99:168,0,133	0/1:24,6:30:99:243,0,106	1/1:21,5:25:24.65:335,25,0	0/1:24,3:26:52.75:105,0,53	1/1:11,2:13:6.94:168,7,0	1/1:11,3:14:25.33:229,25,0	0/1:5,5:18:19.63:75,0,20	0/0:25,0:24:47.26:0,47,329	1/1:10,2:12:21.36:142,21,0	0/1:29,2:25:99:223,0,150	0/1:22,2:23:99:208,0,115	1/1:10,0:9:0.89:122,1,0	0/1:19,3:22:24.83:188,0,25	0/1:17,2:18:32.34:142,0,32	0/1:8,2:11:25.14:25,0,44	0/1:5,4:28:1.37:57,0,1	0/1:22,3:21:72.25:253,0,72	0/1:26,4:24:99:132,0,164	1/1:11,0:7:14.53:108,15,0
chr10	94566883	.	A	AC	1035.19	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.148;DP=634;FS=3.323;HRun=6;HaplotypeScore=63.1523;InbreedingCoeff=0.9917;MQ=67.75;MQ0=0;MQRankSum=-3.738;QD=33.39;ReadPosRankSum=0.933;VQSLOD=3.7101;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,990	0/0:11,0:11:27.06:0,27,275	0/0:13,0:13:35.94:0,36,346	0/0:14,0:15:23.10:0,23,251	0/0:33,0:33:90.20:0,90,917	0/0:25,0:25:72.16:0,72,735	0/0:16,0:16:42.08:0,42,423	0/0:27,0:27:66.13:0,66,665	0/0:17,0:17:51.09:0,51,507	0/0:24,0:24:66.14:0,66,667	0/0:21,0:21:51.08:0,51,507	0/0:27,0:27:66.12:0,66,660	0/0:26,0:26:75.16:0,75,759	0/0:14,0:14:33.07:0,33,336	0/0:27,0:27:78.14:0,78,781	0/0:29,0:29:78.14:0,78,787	1/1:0,31:31:90.29:1130,90,0	0/0:34,0:34:99:0,99,996	0/0:18,0:18:42.08:0,42,419	0/0:24,0:24:66.15:0,66,673	0/0:35,0:35:99:0,99,993	0/0:27,0:27:75.13:0,75,747	0/0:28,0:28:75.13:0,75,750	0/0:12,0:12:33.07:0,33,337	0/0:15,0:15:45.10:0,45,459	0/0:23,0:23:66.14:0,66,668	0/0:20,0:20:54.07:0,54,530	0/0:7,0:7:21.05:0,21,214
chr10	94567273	.	CACCAAGG	C	1521.92	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.128;DP=727;FS=4.246;HRun=0;HaplotypeScore=161.0340;InbreedingCoeff=1.0000;MQ=62.51;MQ0=0;MQRankSum=-7.568;QD=56.37;ReadPosRankSum=-0.566;VQSLOD=3.3686;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:60.21:1617,60,0	0/0:17,0:17:51.18:0,51,2141	0/0:20,0:20:60.16:0,60,2232	0/0:16,0:16:42.11:0,42,1639	0/0:18,0:18:54.17:0,54,2107	0/0:25,0:25:75.26:0,75,2927	0/0:18,0:18:54.17:0,54,2094	0/0:34,0:34:99:0,102,4075	0/0:25,0:25:72.25:0,72,2992	0/0:27,0:27:78.27:0,78,3227	0/0:18,0:18:54.19:0,54,2263	0/0:32,0:32:96.33:0,96,3895	0/0:33,0:33:99:0,99,4099	0/0:32,0:32:96.33:0,96,3928	0/0:28,0:28:84.26:0,84,3314	0/0:21,0:21:63.22:0,63,2523	0/0:33,0:33:99:0,99,4015	0/0:28,0:28:84.29:0,84,3349	0/0:26,0:26:78.26:0,78,3098	0/0:25,0:25:75.23:0,75,2895	0/0:42,0:42:99:0,123,5072	0/0:32,0:32:96.33:0,96,3931	0/0:17,0:17:51.18:0,51,2091	0/0:24,0:24:72.25:0,72,2892	0/0:18,0:18:54.19:0,54,2102	0/0:33,0:33:99:0,99,3915	0/0:38,0:38:99:0,114,4754	0/0:20,0:20:60.21:0,60,2511
chr10	94569264	.	CA	C	4123.54	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.607;DP=636;FS=4.607;HRun=3;HaplotypeScore=58.8522;InbreedingCoeff=0.9890;MQ=64.01;MQ0=5;MQRankSum=2.280;QD=33.52;ReadPosRankSum=3.359;VQSLOD=4.2447;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,1725	1/1:0,3:3:9.03:112,9,0	0/0:27,1:23:59.98:0,60,793	0/0:28,0:27:69.53:0,70,1093	1/1:1,24:25:66.21:818,66,0	0/0:21,0:21:57.19:0,57,821	0/0:21,0:21:63.18:0,63,869	0/0:25,0:25:75.25:0,75,1065	1/1:0,14:14:42.13:520,42,0	0/0:38,0:38:99:0,108,1510	0/0:17,0:17:45.15:0,45,635	0/0:28,0:28:78.26:0,78,1115	0/0:17,0:17:51.16:0,51,714	0/0:17,0:17:51.17:0,51,734	1/1:1,26:27:75.24:927,75,0	1/1:0,15:15:42.13:521,42,0	0/0:30,0:30:87.29:0,87,1252	1/1:0,20:20:54.17:669,54,0	0/0:25,0:25:66.15:0,66,902	0/0:16,0:16:48.16:0,48,685	0/0:29,0:29:84.28:0,84,1208	0/0:25,0:25:72.23:0,72,1010	0/0:22,0:22:63.20:0,63,891	0/0:22,0:22:50.68:0,51,819	1/1:1,18:19:45.14:558,45,0	0/0:27,0:27:81.27:0,81,1151	0/0:25,0:25:75.25:0,75,1079	0/0:8,0:7:24.08:0,24,345
chr10	94571452	.	CT	C	20288.73	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.392;DP=633;FS=3.073;HRun=3;HaplotypeScore=69.7595;InbreedingCoeff=0.9348;MQ=70.37;MQ0=0;MQRankSum=-5.092;QD=33.21;ReadPosRankSum=4.837;VQSLOD=5.3415;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:42:99:1487,120,0	1/1:2,6:8:17.79:198,18,0	0/0:10,0:10:26.84:0,27,298	0/0:12,0:11:30.03:0,30,365	1/1:0,16:16:45.14:558,45,0	1/1:0,22:22:57.18:706,57,0	1/1:0,37:37:93.29:1153,93,0	1/1:2,13:15:39.10:470,39,0	1/1:1,18:19:51.16:632,51,0	1/1:1,26:27:75.23:929,75,0	1/1:0,10:10:24.08:297,24,0	1/1:0,36:36:99:1264,102,0	1/1:1,18:19:51.16:632,51,0	1/1:0,24:24:66.21:818,66,0	1/1:1,29:30:68.83:855,69,0	1/1:0,14:14:39.12:483,39,0	1/1:0,35:35:99:1227,99,0	1/1:0,31:31:87.27:1078,87,0	1/1:2,11:13:33.10:399,33,0	1/1:1,14:15:39.12:480,39,0	1/1:1,65:66:99:2268,184,0	1/1:2,19:21:54.10:650,54,0	1/1:0,7:7:14.85:185,15,0	1/1:0,37:37:99:1302,105,0	1/1:0,14:14:36.11:446,36,0	1/1:2,20:22:57.16:692,57,0	1/1:1,28:29:81.09:1004,81,0	1/1:0,2:2:6.02:74,6,0
chr10	94571910	.	TTC	T	511.65	PASS	AB=0.923;AC=8;AF=0.143;AN=56;BaseQRankSum=-0.054;DP=491;FS=0.000;HRun=0;HaplotypeScore=85.2720;InbreedingCoeff=0.4102;MQ=68.77;MQ0=2;MQRankSum=-0.669;QD=5.81;ReadPosRankSum=-6.547;VQSLOD=0.5522;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:19.06:0,19,715	0/0:5,0:5:11.14:0,11,77	0/0:17,0:11:21.72:0,22,267	0/0:23,0:14:23.63:0,24,233	0/0:29,0:29:2.91:0,3,556	0/0:9,0:9:18.03:0,18,185	0/0:12,0:11:14.97:0,15,140	1/1:30,1:31:49.33:423,49,0	0/0:10,0:10:20.88:0,21,191	0/0:20,0:20:57.10:0,57,789	0/0:14,0:14:39.07:0,39,533	0/0:13,0:13:18.03:0,18,179	0/0:15,0:15:11.42:0,11,153	0/1:14,0:14:0.35:0,0,230	0/0:24,0:24:51.48:0,51,457	0/1:14,5:19:81.72:82,0,326	0/0:22,0:22:57.10:0,57,608	0/0:28,0:28:9.79:0,10,377	0/0:23,0:22:59.04:0,59,680	0/0:16,0:16:47.63:0,48,616	0/0:13,0:13:35.13:0,35,471	0/1:10,0:10:5.27:5,0,131	0/0:19,0:19:35.44:0,35,363	0/0:22,0:22:27.24:0,27,244	0/1:8,1:9:37.93:38,0,109	0/0:21,0:21:62.82:0,63,823	0/0:13,0:13:36.05:0,36,542	1/1:5,0:5:13:98,13,0
chr10	94571912	.	C	CTT	4245.21	PASS	AB=0.835;AC=35;AF=0.625;AN=56;BaseQRankSum=2.248;DP=505;FS=5.613;HRun=12;HaplotypeScore=78.6947;InbreedingCoeff=0.6329;MQ=69.56;MQ0=2;MQRankSum=-1.439;QD=11.63;ReadPosRankSum=3.281;VQSLOD=3.4501;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:33:2.36:171,0,2	1/1:1,3:5:8.98:103,9,0	0/0:17,0:11:10.71:0,11,106	0/1:25,0:15:5.67:6,0,43	1/1:16,10:28:28.28:619,28,0	1/1:1,0:10:18.01:167,18,0	1/1:3,0:12:11.96:104,12,0	0/1:31,0:31:35.38:144,0,35	1/1:4,7:11:9.03:126,9,0	0/0:19,0:19:44.92:0,45,400	0/0:14,0:14:32.99:0,33,304	1/1:1,0:15:15.02:143,15,0	1/1:2,2:17:26.75:243,27,0	1/1:14,0:15:23.16:168,23,0	1/1:8,16:25:32.60:429,33,0	1/1:9,5:18:47.12:575,47,0	0/1:4,0:21:7.52:86,0,8	1/1:1,24:28:45.14:602,45,0	0/0:20,0:21:36.03:0,36,343	0/0:16,0:18:38.21:0,38,310	0/0:11,0:12:14.83:0,15,180	1/1:1,0:10:15.45:135,15,0	1/1:11,0:21:8.53:86,9,0	1/1:8,0:24:11.02:113,11,0	1/1:8,2:10:16.51:171,17,0	0/0:21,0:24:54.49:0,54,506	0/0:14,0:14:26.53:0,27,249	0/1:5,0:5:7.68:54,0,8
chr10	94571998	.	A	AT	3213.98	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-13.285;DP=470;FS=25.800;HRun=8;HaplotypeScore=77.5541;InbreedingCoeff=0.8839;MQ=69.51;MQ0=1;MQRankSum=1.776;QD=12.75;ReadPosRankSum=-3.542;VQSLOD=0.6465;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:86.07:0,86,578	0/0:6,0:6:8.77:0,9,59	0/0:24,0:12:5.80:0,6,75	0/0:6,0:4:5.75:0,6,32	0/0:22,0:22:53.38:0,53,359	1/1:20,0:20:9.18:63,9,0	1/1:20,0:20:31:219,31,0	1/1:20,1:21:20.66:137,21,0	0/0:12,0:12:29.53:0,30,195	1/1:1,12:13:33.03:331,33,0	1/1:3,11:14:26.99:276,27,0	1/1:16,0:16:26.79:117,27,0	1/1:12,0:12:16.50:103,17,0	1/1:16,0:16:25.08:113,25,0	0/0:21,0:21:47.48:0,47,317	0/0:22,0:22:53.41:0,53,357	0/0:34,0:39:99:0,100,823	0/0:16,0:16:35.50:0,35,241	1/1:12,7:19:39.93:400,40,0	1/1:5,13:18:35.41:340,35,0	1/1:2,3:5:6.02:69,6,0	1/1:4,0:4:1.33:3,1,0	1/1:11,0:11:19.10:106,19,0	1/1:10,0:10:2.97:9,3,0	0/0:15,0:15:41.56:0,42,281	1/1:4,22:26:71.25:710,71,0	1/1:3,13:16:30.08:336,30,0	1/1:11,0:11:14.77:96,15,0
chr10	94572006	.	TA	T	2476.30	PASS	AB=0.923;AC=21;AF=0.375;AN=56;BaseQRankSum=-6.515;DP=485;FS=4.156;HRun=12;HaplotypeScore=81.9261;InbreedingCoeff=0.4699;MQ=71.41;MQ0=2;MQRankSum=-1.547;QD=11.01;ReadPosRankSum=1.900;VQSLOD=3.5402;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,35:37:80.69:626,81,0	0/1:1,5:6:6.71:58,0,7	0/0:27,0:10:19.16:0,19,120	0/0:10,0:8:1.91:0,2,45	1/1:3,16:20:44.72:328,45,0	0/0:21,0:21:7.23:0,7,132	0/1:19,0:19:35.18:36,0,35	0/1:21,0:21:73.98:78,0,74	1/1:8,5:13:26.86:205,27,0	0/0:15,0:15:26.89:0,27,211	0/0:12,0:12:26.51:0,27,183	0/0:17,0:17:7.72:0,8,72	0/0:13,0:13:5.34:0,5,52	0/0:15,0:15:29.14:0,29,98	1/1:2,20:23:43.87:331,44,0	1/1:2,18:20:36.06:377,36,0	0/0:41,0:41:93.73:0,94,948	1/1:6,9:15:38.76:291,39,0	0/0:15,0:16:32.20:0,32,225	0/0:19,0:19:45.96:0,46,324	0/0:3,0:3:5.96:0,6,43	0/1:6,0:6:24.52:27,0,25	0/1:11,0:11:3.83:4,0,34	0/1:7,0:7:5.44:5,0,32	1/1:1,15:16:38.85:301,39,0	0/0:30,0:30:74.98:0,75,520	0/0:20,0:21:17.43:0,17,272	0/1:10,1:11:0.68:1,0,53
chr10	94573103	.	A	AAACC	4179.62	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=10.797;DP=761;FS=5.965;HRun=0;HaplotypeScore=177.2441;InbreedingCoeff=0.4831;MQ=74.21;MQ0=1;MQRankSum=-10.662;QD=18.02;ReadPosRankSum=-3.189;VQSLOD=2.6367;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:19.40:1273,19,0	0/1:7,0:7:18.90:76,0,19	0/0:36,0:33:21.26:0,21,368	0/0:32,0:31:49.47:0,49,714	0/1:32,0:32:80.44:404,0,80	0/0:28,0:28:72.08:0,72,955	0/0:29,0:29:72.18:0,72,1056	0/0:30,0:30:54.11:0,54,658	1/1:25,0:25:11.16:308,11,0	0/0:29,0:29:75.21:0,75,1115	0/0:23,0:23:54.11:0,54,747	0/0:26,0:26:63.13:0,63,902	0/0:30,0:30:69.17:0,69,1009	0/0:27,0:27:63.18:0,63,975	0/1:28,0:28:70.79:360,0,71	1/1:36,0:36:20.11:406,20,0	1/1:8,22:30:21.01:1015,21,0	0/1:24,0:24:27.83:231,0,28	0/0:19,0:18:13.03:0,13,357	0/0:35,0:35:75.20:0,75,1124	0/0:32,0:32:69.14:0,69,946	0/0:27,0:27:72.21:0,72,1106	0/0:23,0:23:66.19:0,66,993	0/0:37,0:37:89.05:0,89,1316	0/1:13,0:13:35.91:109,0,36	0/0:27,0:27:72.21:0,72,1120	0/0:28,0:28:69.09:0,69,941	0/0:11,0:11:18:0,18,196
chr10	94573118	.	C	CCAAA	6491.12	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=9.089;DP=778;FS=2.067;HRun=0;HaplotypeScore=165.4977;InbreedingCoeff=0.4671;MQ=63.44;MQ0=2;MQRankSum=-6.770;QD=15.99;ReadPosRankSum=-0.963;VQSLOD=4.3067;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,36:43:84.29:2038,84,0	1/1:6,0:6:9.03:146,9,0	0/0:40,0:35:65.70:0,66,653	0/0:34,0:33:14.41:0,14,554	1/1:33,0:33:53.10:784,53,0	0/0:29,0:29:57.12:0,57,840	0/0:30,0:30:75.19:0,75,1097	0/0:35,0:35:63.06:0,63,725	1/1:31,0:31:33.11:537,33,0	0/1:30,0:30:37.83:38,0,361	0/0:19,0:19:14.87:0,15,289	0/0:26,0:26:60.13:0,60,869	0/0:28,0:28:60.16:0,60,919	0/0:29,0:29:66.17:0,66,991	1/1:31,0:31:42.07:684,42,0	1/1:31,0:31:42.14:696,42,0	0/1:33,0:33:99:619,0,142	1/1:18,0:18:30.10:478,30,0	0/1:15,0:14:53.08:53,0,89	0/1:32,0:32:36.87:37,0,426	0/1:28,0:28:40.55:41,0,310	0/0:30,0:30:72.19:0,72,1095	0/0:24,0:24:57.18:0,57,918	0/0:36,0:36:78.24:0,78,1222	1/1:15,0:15:12.04:177,12,0	0/1:28,0:28:10.21:10,0,416	0/1:32,0:32:99:154,0,309	0/0:11,0:11:12.01:0,12,149
chr10	94573122	.	A	ACAAACAAG	10077.79	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-0.430;DP=797;FS=0.355;HRun=0;HaplotypeScore=214.3644;InbreedingCoeff=0.7272;MQ=61.38;MQ0=2;MQRankSum=-7.888;QD=32.83;ReadPosRankSum=1.674;VQSLOD=4.5211;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:43,0:43:12.51:389,13,0	1/1:0,6:7:17.80:439,18,0	0/0:40,0:35:73.49:0,73,1552	0/0:33,0:31:53.12:0,53,1279	1/1:6,27:36:66.56:2122,67,0	0/0:28,0:28:78.20:0,78,1675	0/0:30,0:30:81.26:0,81,1980	0/0:35,0:35:87.24:0,87,1783	1/1:1,30:33:32.97:1423,33,0	0/0:30,0:30:81.21:0,81,1679	0/0:21,0:21:45.02:0,45,1031	0/0:26,0:26:66.20:0,66,1626	0/0:26,0:26:75.20:0,75,1720	0/0:28,0:28:75.22:0,75,1835	1/1:6,26:33:45.15:1940,45,0	1/1:1,31:36:42.14:1810,42,0	0/0:32,0:32:57.40:0,57,576	1/1:4,15:22:33.11:1397,33,0	0/1:16,0:15:28.57:29,0,259	0/1:32,0:32:21.27:21,0,1060	0/0:29,0:29:3.35:0,3,878	0/0:30,0:30:87.25:0,87,2009	0/0:25,0:25:66.17:0,66,1597	0/0:35,0:35:96.27:0,96,2285	1/1:3,12:17:12.04:485,12,0	0/0:30,0:30:23.17:0,23,1155	0/1:32,0:32:23.09:23,0,865	0/0:12,0:12:23.95:0,24,404
chr10	94573650	.	A	AAC	5365.26	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-13.884;DP=752;FS=0.000;HRun=0;HaplotypeScore=85.7048;InbreedingCoeff=0.9947;MQ=68.38;MQ0=1;MQRankSum=0.072;QD=32.92;ReadPosRankSum=2.935;VQSLOD=7.0715;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:49:99:0,126,1465	1/1:2,9:12:27.09:437,27,0	0/0:36,0:28:36.32:0,36,448	0/0:23,0:19:21.11:0,21,368	1/1:4,21:25:26.54:935,27,0	0/0:10,0:10:24.08:0,24,293	0/0:34,0:36:89.93:0,90,1043	0/0:24,0:25:57:0,57,664	1/1:8,23:32:14.63:968,15,0	0/0:31,0:32:81.09:0,81,967	0/0:17,0:17:45.13:0,45,540	0/0:32,0:32:87.25:0,87,1041	0/0:26,0:26:69.16:0,69,793	0/0:25,0:29:68.71:0,69,775	1/1:5,25:30:23.53:888,24,0	1/1:5,26:31:63.22:1019,63,0	0/0:24,0:24:63.15:0,63,743	1/1:4,15:19:42.14:681,42,0	0/0:22,0:23:45.14:0,45,550	0/0:30,0:31:81.07:0,81,956	0/0:32,0:34:95.95:0,96,1116	0/0:22,0:24:62.85:0,63,712	0/0:22,0:23:47.97:0,48,553	0/0:32,0:32:75.18:0,75,889	1/1:2,12:14:27.09:438,27,0	0/0:42,0:42:99:0,102,1247	0/0:27,0:28:66.04:0,66,784	0/0:12,0:13:35.93:0,36,406
chr10	94573824	.	A	AC	13426.75	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-8.289;DP=629;FS=15.600;HRun=7;HaplotypeScore=65.9702;InbreedingCoeff=0.9679;MQ=75.77;MQ0=2;MQRankSum=-4.489;QD=25.87;ReadPosRankSum=0.797;VQSLOD=3.9205;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:90.01:0,90,850	1/1:1,3:4:6.02:69,6,0	0/0:22,0:21:34.86:0,35,389	0/0:20,0:19:32.95:0,33,317	1/1:2,10:12:30.09:361,30,0	1/1:4,14:18:42.08:480,42,0	1/1:5,24:29:37.22:732,37,0	1/1:8,0:32:59.17:335,59,0	1/1:4,19:23:51.16:616,51,0	1/1:2,26:28:75.17:867,75,0	1/1:3,7:10:18.05:216,18,0	1/1:2,22:24:54.17:652,54,0	1/1:2,16:18:51.16:614,51,0	1/1:2,16:18:45.14:544,45,0	1/1:6,30:36:84.26:1015,84,0	1/1:2,26:28:60.18:725,60,0	0/0:26,0:26:72.10:0,72,689	1/1:3,24:27:66.20:797,66,0	1/1:1,17:19:54.14:629,54,0	1/1:2,19:21:45.14:542,45,0	1/1:2,33:35:75.23:906,75,0	1/1:2,17:19:39.12:471,39,0	1/1:2,12:14:26.52:324,27,0	1/1:0,26:26:60.18:725,60,0	1/1:2,18:21:36.11:435,36,0	1/1:3,23:26:69.20:820,69,0	1/1:2,17:19:36.11:435,36,0	1/1:2,0:11:23:117,23,0
chr10	94574698	.	C	CAAAAT	22071.62	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-16.860;DP=821;FS=0.589;HRun=0;HaplotypeScore=131.8765;InbreedingCoeff=0.9956;MQ=79.43;MQ0=0;MQRankSum=-6.893;QD=67.09;ReadPosRankSum=2.586;VQSLOD=5.9739;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:44:93.23:2748,93,0	0/0:12,0:12:36.09:0,36,699	0/0:27,0:27:65.37:0,65,994	0/0:24,0:24:66.11:0,66,1182	0/0:26,0:26:72.25:0,72,1508	1/1:0,23:27:60.21:1857,60,0	1/1:5,19:26:48.16:1480,48,0	1/1:4,24:32:84.22:2239,84,0	0/0:29,0:29:84.27:0,84,1709	0/0:27,0:27:81.22:0,81,1528	0/0:23,0:23:66.19:0,66,1306	1/1:2,32:36:87.30:2690,87,0	1/1:3,26:32:71.75:2225,72,0	1/1:1,25:26:63.22:1950,63,0	0/0:47,0:47:99:0,126,2538	0/0:39,0:39:99:0,108,2137	0/0:26,0:26:71.37:0,71,1451	0/0:17,0:17:48.06:0,48,852	0/0:38,0:38:99:0,102,2012	0/0:23,0:23:66.23:0,66,1382	0/0:53,0:53:99:0,150,2790	1/1:2,22:26:69.07:1964,69,0	1/1:3,23:28:60.21:1855,60,0	1/1:3,40:46:87.77:2697,88,0	0/0:27,0:27:81.24:0,81,1557	0/0:24,0:24:63.20:0,63,1237	0/0:30,0:29:90.27:0,90,1809	1/1:0,4:6:12.04:367,12,0
chr10	94574895	.	C	CT	701.27	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.649;DP=637;FS=21.995;HRun=9;HaplotypeScore=65.0191;InbreedingCoeff=0.9160;MQ=77.43;MQ0=0;MQRankSum=-3.605;QD=23.38;ReadPosRankSum=-0.709;VQSLOD=2.1341;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:72.19:796,72,0	0/0:15,0:15:38.73:0,39,338	0/0:19,0:19:44.02:0,44,370	0/0:18,0:18:20.66:0,21,274	0/0:35,0:35:83.93:0,84,729	0/0:35,0:35:92.97:0,93,807	0/0:9,0:9:20.99:0,21,182	0/0:33,0:33:65.97:0,66,573	0/0:27,0:27:65.92:0,66,562	0/0:20,0:20:50.95:0,51,439	0/0:19,0:19:13.77:0,14,287	0/0:33,0:33:83.97:0,84,729	0/0:21,0:21:47.97:0,48,417	0/0:18,0:18:41.97:0,42,365	0/0:27,0:27:59.95:0,60,521	0/0:22,0:22:59.98:0,60,521	0/0:21,0:21:62.99:0,63,547	0/0:22,0:22:59.99:0,60,521	0/0:16,0:16:38.98:0,39,339	0/0:20,0:20:50.94:0,51,439	0/0:17,1:18:8.81:0,9,305	0/0:22,0:22:28.78:0,29,414	0/0:26,0:26:68.96:0,69,595	0/0:16,0:16:47.99:0,48,417	0/0:40,0:40:99:0,102,886	0/0:18,0:18:35.97:0,36,312	0/0:22,0:22:59.99:0,60,521	0/0:14,0:14:29.97:0,30,260
chr10	94575407	.	A	AT	15570.16	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-14.684;DP=588;FS=0.000;HRun=0;HaplotypeScore=53.5816;InbreedingCoeff=0.9951;MQ=85.98;MQ0=0;MQRankSum=-1.856;QD=40.03;ReadPosRankSum=1.378;VQSLOD=5.1505;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:78.27:1245,78,0	0/0:11,0:11:33.10:0,33,444	0/0:21,0:20:37.75:0,38,454	0/0:18,0:18:47.30:0,47,590	0/0:12,0:12:36.04:0,36,435	1/1:2,17:19:45.15:719,45,0	1/1:0,22:22:63.21:1005,63,0	1/1:2,31:33:82.75:1251,83,0	0/0:24,0:24:69.21:0,69,933	1/1:0,26:27:81.26:1253,81,0	1/1:1,16:17:33.11:526,33,0	1/1:0,19:19:48.16:766,48,0	1/1:0,19:19:51.17:814,51,0	1/1:0,16:16:36.12:575,36,0	0/0:36,0:36:99:0,108,1424	0/0:23,0:23:69.23:0,69,965	0/0:25,0:25:75.19:0,75,989	0/0:16,0:16:48.13:0,48,650	1/1:0,17:17:51.14:759,51,0	1/1:1,19:20:48.16:765,48,0	1/1:1,43:44:99:1820,114,0	1/1:0,14:14:33.09:499,33,0	1/1:0,11:11:26.57:399,27,0	1/1:1,19:20:51.17:814,51,0	0/0:13,0:13:36.11:0,36,487	1/1:1,28:29:84.29:1337,84,0	1/1:0,19:20:54.12:831,54,0	1/1:0,5:5:12.04:191,12,0
chr10	94575800	.	G	GT	3446.02	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-10.811;DP=619;FS=0.398;HRun=8;HaplotypeScore=59.5766;InbreedingCoeff=0.9543;MQ=69.57;MQ0=4;MQRankSum=1.313;QD=23.77;ReadPosRankSum=3.605;VQSLOD=4.2118;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.04:0,75,686	1/1:3,4:7:15.04:173,15,0	0/0:35,0:21:5.30:0,5,260	0/0:25,0:20:29.78:0,30,319	1/1:4,23:27:69.20:778,69,0	0/0:21,0:21:59.87:0,60,535	0/0:17,0:17:48.02:0,48,439	0/0:30,0:30:80.71:0,81,723	1/1:1,18:19:48.14:554,48,0	0/0:26,0:26:69:0,69,623	0/0:18,0:18:50.75:0,51,447	0/0:17,0:17:45.02:0,45,412	0/0:20,0:20:54.03:0,54,494	0/0:17,0:17:44.99:0,45,405	1/1:6,26:32:54.16:623,54,0	1/1:2,16:18:5.65:314,6,0	0/0:19,0:19:48.02:0,48,438	1/1:2,12:14:27.08:312,27,0	0/0:26,0:25:37.43:0,37,586	0/0:33,0:33:87.04:0,87,796	0/0:13,0:13:36.02:0,36,328	0/0:18,0:18:48.02:0,48,438	0/0:21,0:21:49.44:0,49,464	0/0:25,0:25:71.73:0,72,633	1/1:3,25:28:60.18:693,60,0	0/0:25,0:25:56.89:0,57,509	0/0:30,0:30:79.59:0,80,718	0/0:12,0:12:24.01:0,24,218
chr10	94577370	.	G	GA	5463.11	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=4.460;DP=455;FS=19.254;HRun=0;HaplotypeScore=74.7085;InbreedingCoeff=0.9411;MQ=85.17;MQ0=2;MQRankSum=-2.239;QD=27.18;ReadPosRankSum=12.660;VQSLOD=2.1906;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:26.92:0,27,218	0/0:4,0:4:8.95:0,9,70	0/0:27,0:22:39.94:0,40,403	0/0:25,0:19:35.11:0,35,265	0/0:6,0:6:8.98:0,9,73	1/1:0,15:15:39.12:467,39,0	1/1:1,17:18:35.75:431,36,0	1/1:3,18:21:53.52:538,54,0	0/0:12,0:12:23.64:0,24,178	0/0:15,0:15:20.97:0,21,178	0/0:6,0:6:14.98:0,15,125	1/1:1,25:26:53.65:623,54,0	1/1:0,20:20:48.15:570,48,0	1/1:1,32:33:81.09:960,81,0	0/0:16,0:16:28.10:0,28,195	0/0:17,0:17:32.03:0,32,221	0/0:25,0:25:38.84:0,39,268	0/0:7,0:7:11.86:0,12,83	0/0:10,0:10:29.91:0,30,244	0/0:6,0:6:14.98:0,15,125	0/0:26,0:25:52.79:0,53,442	1/1:0,18:18:48.15:582,48,0	1/1:1,25:26:54.14:648,54,0	1/1:0,21:21:51.15:606,51,0	0/0:5,0:5:12.01:0,12,107	0/0:14,0:14:35.67:0,36,298	0/0:21,0:21:45.78:0,46,376	1/1:0,3:3:3.01:38,3,0
chr10	94582359	.	AT	A	1498.07	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.877;DP=632;FS=3.149;HRun=8;HaplotypeScore=59.2150;InbreedingCoeff=0.9856;MQ=70.74;MQ0=0;MQRankSum=-1.340;QD=25.39;ReadPosRankSum=2.558;VQSLOD=4.6097;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,55:59:99:1593,165,0	0/0:9,0:9:27.08:0,27,326	0/0:14,0:14:33.07:0,33,368	0/0:11,0:11:19.25:0,19,253	0/0:31,0:31:82.13:0,82,979	0/0:26,0:27:78.11:0,78,920	0/0:10,0:10:27.08:0,27,324	0/0:42,0:42:99:0,102,1203	0/0:22,0:22:57.17:0,57,679	0/0:30,0:30:84.26:0,84,1013	0/0:20,0:20:48.15:0,48,580	0/0:21,0:21:57.17:0,57,688	0/0:20,0:20:54.14:0,54,629	0/0:21,0:21:54.17:0,54,651	0/0:24,1:25:40.22:0,40,755	0/0:28,0:28:75.23:0,75,905	0/0:28,0:28:81.25:0,81,978	0/0:25,0:25:66.20:0,66,794	0/0:20,0:20:51.16:0,51,611	0/0:26,0:26:63.17:0,63,737	0/0:10,0:10:24.07:0,24,289	0/0:17,0:17:42.13:0,42,500	0/0:17,0:17:45.14:0,45,543	0/0:16,0:16:45.14:0,45,544	0/0:24,0:24:66.19:0,66,787	0/0:25,0:25:60.17:0,60,713	0/0:27,0:27:75.21:0,75,885	0/0:7,0:7:21.06:0,21,247
chr10	94583125	.	C	CGGG	2417.55	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=9.946;DP=463;FS=7.414;HRun=7;HaplotypeScore=75.6812;InbreedingCoeff=0.9250;MQ=82.67;MQ0=0;MQRankSum=-1.506;QD=12.66;ReadPosRankSum=1.226;VQSLOD=-0.1552;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,105,1430	0/0:4,0:4:6.02:0,6,82	0/0:17,0:17:42.07:0,42,542	0/0:11,0:11:5.91:0,6,194	0/0:9,0:9:24.08:0,24,327	1/1:1,0:20:32.86:252,33,0	1/1:2,0:28:49.05:375,49,0	1/1:1,2:12:20.99:231,21,0	0/0:13,0:13:39.13:0,39,531	0/0:10,0:10:21.06:0,21,287	0/0:7,0:7:12.02:0,12,150	1/1:5,2:21:29.88:248,30,0	1/1:1,0:8:13.99:99,14,0	1/1:1,0:15:29.91:248,30,0	0/0:17,0:17:48.14:0,48,637	0/0:16,0:16:42.13:0,42,572	1/1:4,0:36:15.82:68,16,0	0/0:26,0:26:72.18:0,72,958	0/0:13,0:13:33.07:0,33,418	0/0:4,0:4:6:0,6,66	0/0:41,0:42:99:0,117,1573	1/1:3,0:10:20.71:149,21,0	1/1:2,0:9:14.91:115,15,0	1/1:3,14:28:56.98:790,57,0	0/0:17,0:17:48.16:0,48,655	0/0:18,0:18:45.09:0,45,612	0/0:6,0:6:18.06:0,18,245	1/1:1,0:4:6:61,6,0
chr10	94583289	.	TGGCG	T	603.27	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=5.308;DP=308;FS=0.000;HRun=0;HaplotypeScore=53.7737;InbreedingCoeff=0.6318;MQ=78.73;MQ0=0;MQRankSum=-1.959;QD=15.88;ReadPosRankSum=3.571;VQSLOD=2.4694;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,9:14:21.07:360,21,0	./.	0/0:11,0:11:16.17:0,16,319	0/0:8,0:9:9.03:0,9,181	0/0:3,0:3:9.01:0,9,174	0/0:13,0:13:24.07:0,24,549	0/0:31,0:31:66.20:0,66,1559	0/0:7,0:7:6.02:0,6,151	0/0:8,0:8:18.05:0,18,403	0/0:6,0:6:9.03:0,9,214	0/0:4,0:4:9.03:0,9,224	0/0:16,0:16:21.07:0,21,529	0/0:4,0:4:6.02:0,6,151	0/0:12,0:12:12.03:0,12,222	0/0:9,0:9:21.04:0,21,427	0/0:5,0:5:6.01:0,6,101	1/1:16,8:24:21.07:360,21,0	0/0:20,0:20:33.11:0,33,785	0/0:10,0:10:18.06:0,18,439	0/0:4,0:4:9.03:0,9,226	0/0:38,0:38:51.16:0,51,1227	0/0:3,0:3:9.03:0,9,226	0/0:3,0:3:9.03:0,9,226	0/0:28,0:28:57.15:0,57,1282	0/0:6,0:6:15.05:0,15,362	0/0:10,0:10:18.06:0,18,451	0/0:5,0:5:3.01:0,3,75	0/0:5,0:5:15.05:0,15,364
chr10	94583735	.	G	GC	1110.33	PASS	AB=1.000;AC=33;AF=0.868;AN=38;BaseQRankSum=-2.377;DP=71;FS=12.175;HRun=4;HaplotypeScore=13.4573;InbreedingCoeff=0.2307;MQ=67.96;MQ0=0;MQRankSum=-2.377;QD=16.82;ReadPosRankSum=1.773;VQSLOD=1.4753;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:3.01:41,3,0	1/1:0,1:1:3.01:41,3,0	0/0:1,0:1:3.01:0,3,34	0/0:2,0:2:2.68:0,3,11	1/1:0,1:1:3.01:40,3,0	./.	1/1:1,10:11:18.06:226,18,0	0/1:2,0:2:0:0,0,0	./.	./.	./.	1/1:0,1:1:3.01:41,3,0	1/1:0,1:1:3.01:41,3,0	./.	./.	1/1:0,2:2:3.01:40,3,0	1/1:2,4:6:3.01:33,3,0	1/1:0,3:3:6.02:82,6,0	1/1:1,3:4:9.03:117,9,0	1/1:0,1:1:3.01:38,3,0	1/1:2,12:14:9.01:110,9,0	./.	1/1:1,0:1:3.01:41,3,0	1/1:0,7:7:6.01:70,6,0	1/1:0,2:2:6.02:82,6,0	1/1:0,4:4:12.04:162,12,0	./.	./.
chr10	94583863	.	AC	A	315.99	PASS	AB=0.972;AC=14;AF=0.636;AN=22;BaseQRankSum=-1.586;DP=78;FS=0.000;HRun=9;HaplotypeScore=38.7155;InbreedingCoeff=0.3196;MQ=131.78;MQ0=0;MQRankSum=-2.654;QD=4.45;ReadPosRankSum=0.298;VQSLOD=-0.5963;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:11:7.73:23,8,0	./.	0/1:15,0:10:5.26:5,0,52	0/1:16,1:10:9.49:9,0,87	./.	./.	0/0:2,0:2:6.01:0,6,60	1/1:2,1:3:2.99:27,3,0	./.	./.	./.	0/0:1,0:1:3.01:0,3,35	./.	0/0:1,0:1:3.01:0,3,35	./.	./.	1/1:4,0:7:8.14:24,8,0	1/1:0,4:4:12.01:110,12,0	./.	./.	1/1:3,10:13:20.60:192,21,0	./.	./.	./.	./.	1/1:0,1:1:3:27,3,0	./.	./.
chr10	94584006	.	AC	A	127.83	PASS	AC=4;AF=0.125;AN=32;BaseQRankSum=0.504;DP=91;FS=0.000;HRun=8;HaplotypeScore=22.7664;InbreedingCoeff=0.4981;MQ=97.66;MQ0=0;MQRankSum=0.790;QD=10.65;ReadPosRankSum=0.124;VQSLOD=0.2729;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:18.04:0,18,204	./.	0/0:6,0:6:16.18:0,16,149	0/0:5,0:5:5.89:0,6,38	./.	0/0:1,0:1:3.01:0,3,36	0/0:13,0:13:39.12:0,39,471	1/1:3,3:6:9.01:87,9,0	./.	./.	./.	0/0:2,0:2:6.02:0,6,72	0/0:2,0:2:3:0,3,26	0/0:2,0:2:6.01:0,6,62	0/0:1,0:1:3.01:0,3,36	./.	1/1:2,4:6:15.02:140,15,0	0/0:10,0:10:27.08:0,27,320	0/0:1,0:1:0:0,0,0	./.	0/0:24,0:24:45.12:0,45,529	./.	./.	0/0:2,0:2:3.01:0,3,36	./.	0/0:1,0:1:3.01:0,3,36	./.	./.
chr10	94585056	.	T	TTTTTG	3118.32	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.961;DP=651;FS=7.278;HRun=0;HaplotypeScore=119.8325;InbreedingCoeff=0.9973;MQ=76.89;MQ0=1;MQRankSum=-2.071;QD=46.54;ReadPosRankSum=0.523;VQSLOD=3.7317;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,25:41:62.19:1965,62,0	0/0:8,0:8:21.07:0,21,405	0/0:30,0:28:50.64:0,51,792	0/0:27,0:24:30.65:0,31,459	0/0:22,0:22:54.19:0,54,1024	0/0:28,0:28:72.23:0,72,1346	0/0:20,0:20:42.13:0,42,762	0/0:28,0:28:51.16:0,51,889	0/0:16,0:16:39.13:0,39,752	0/0:18,0:18:48.13:0,48,885	0/0:19,0:19:51.17:0,51,957	0/0:21,0:21:54.19:0,54,1041	0/0:25,0:25:57.20:0,57,1100	0/0:19,0:19:48.16:0,48,925	0/0:28,0:28:66.23:0,66,1273	0/0:23,0:23:66.21:0,66,1212	1/1:10,15:26:45.15:1275,45,0	0/0:26,0:26:67.92:0,68,1241	0/0:22,0:22:39.10:0,39,652	0/0:15,0:15:33.10:0,33,603	0/0:24,0:24:63.22:0,63,1190	0/0:26,0:26:60.20:0,60,1095	0/0:27,0:27:72.23:0,72,1325	0/0:17,0:17:36.11:0,36,655	0/0:29,0:29:72.21:0,72,1346	0/0:25,0:24:66.23:0,66,1269	0/0:27,0:27:78.27:0,78,1495	0/0:14,0:14:39.13:0,39,752
chr10	94585796	.	G	GTTC	12035.32	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-12.530;DP=537;FS=3.407;HRun=0;HaplotypeScore=69.3411;InbreedingCoeff=0.9962;MQ=71.97;MQ0=0;MQRankSum=-5.136;QD=55.46;ReadPosRankSum=-1.312;VQSLOD=6.6007;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,15:20:45.08:923,45,0	0/0:7,0:7:21.07:0,21,358	0/0:12,0:12:33.11:0,33,552	0/0:6,0:6:15.05:0,15,252	0/0:27,0:27:75.24:0,75,1251	1/1:4,13:17:45.15:974,45,0	1/1:1,11:13:33.11:729,33,0	1/1:15,30:47:99:2498,117,0	0/0:21,0:21:57.18:0,57,946	0/0:25,0:25:69.22:0,69,1150	0/0:28,0:28:81.28:0,81,1381	1/1:1,14:16:45.09:956,45,0	1/1:2,18:21:54.18:1210,54,0	1/1:0,7:7:21.07:484,21,0	0/0:23,0:23:66.21:0,66,1100	0/0:22,0:22:66.21:0,66,1096	1/1:3,11:15:33.11:717,33,0	0/0:14,0:14:42.14:0,42,715	0/0:16,0:16:48.16:0,48,794	0/0:28,0:28:81.26:0,81,1355	0/0:14,0:14:42.12:0,42,688	1/1:0,17:17:48.08:1055,48,0	1/1:3,15:18:46.31:955,46,0	1/1:3,8:11:24.08:521,24,0	0/0:20,0:20:60.21:0,60,1020	0/0:22,0:22:63.21:0,63,1049	0/0:35,0:34:99:0,99,1679	1/1:1,14:15:45.15:1013,45,0
chr10	94585946	.	A	AT	356.05	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.465;DP=505;FS=20.709;HRun=13;HaplotypeScore=60.4304;InbreedingCoeff=0.7038;MQ=77.37;MQ0=1;MQRankSum=-2.318;QD=9.37;ReadPosRankSum=0.951;VQSLOD=0.9353;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,2:22:33.32:191,33,0	0/0:7,0:7:17.82:0,18,123	0/0:38,0:29:3.91:0,4,184	0/0:20,1:14:5.73:0,6,40	0/0:27,2:29:43.25:0,43,431	0/0:17,0:17:47.58:0,48,329	0/0:11,0:11:31.80:0,32,211	0/0:21,1:22:9.93:0,10,203	0/0:16,0:17:43.64:0,44,292	0/0:18,1:19:22.93:0,23,297	0/0:22,1:23:25.66:0,26,319	0/0:13,0:13:32.66:0,33,224	0/0:14,1:15:13.76:0,14,235	0/0:13,0:13:32.63:0,33,220	0/0:25,0:25:56.51:0,57,391	0/0:21,0:21:44.56:0,45,305	1/1:4,11:16:27.10:285,27,0	0/0:15,0:15:38.58:0,39,261	0/0:16,1:18:5.91:0,6,169	0/0:17,0:17:32.29:0,32,215	0/0:11,0:11:14.84:0,15,103	0/0:10,0:10:17.83:0,18,123	0/0:12,1:15:8.97:0,9,189	0/0:8,0:8:20.73:0,21,140	0/0:22,2:24:3.49:0,3,304	0/0:19,0:19:43.68:0,44,304	0/0:35,0:35:68.09:0,68,458	0/0:4,0:4:8.92:0,9,62
chr10	94588161	.	A	AT	8954.58	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-6.569;DP=559;FS=0.390;HRun=8;HaplotypeScore=90.3445;InbreedingCoeff=0.9564;MQ=72.11;MQ0=3;MQRankSum=-7.058;QD=23.88;ReadPosRankSum=-1.942;VQSLOD=4.4120;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,13:22:48.56:522,49,0	0/0:7,0:7:18.01:0,18,165	0/0:31,0:20:33.31:0,33,285	0/0:19,0:14:3.40:0,3,151	0/0:29,0:29:56.84:0,57,516	1/1:6,13:19:19.65:450,20,0	1/1:8,7:14:30.04:321,30,0	1/1:8,19:28:66.07:735,66,0	0/0:13,0:13:32.99:0,33,295	1/1:3,15:18:45.13:519,45,0	1/1:5,18:23:54.12:608,54,0	1/1:5,12:17:27.08:306,27,0	1/1:3,5:8:15.03:164,15,0	1/1:6,10:16:30.09:346,30,0	0/0:19,0:19:45.02:0,45,410	0/0:23,0:23:63.02:0,63,576	1/1:6,5:11:15.04:173,15,0	0/0:17,0:17:38.39:0,38,379	1/1:19,16:35:67.70:740,68,0	1/1:11,25:36:85.80:973,86,0	1/1:1,3:4:9.03:104,9,0	1/1:4,9:13:24.07:277,24,0	1/1:12,18:30:66.14:736,66,0	1/1:1,8:9:21.06:242,21,0	0/0:26,0:26:62.96:0,63,571	1/1:8,16:24:28.45:527,28,0	1/1:11,24:35:77.67:842,78,0	1/1:2,10:11:33.08:369,33,0
chr10	94588178	.	CT	C	1719.02	PASS	AB=0.811;AC=35;AF=0.625;AN=56;BaseQRankSum=4.225;DP=528;FS=4.372;HRun=16;HaplotypeScore=93.9489;InbreedingCoeff=-0.0167;MQ=65.86;MQ0=6;MQRankSum=-3.834;QD=3.87;ReadPosRankSum=0.975;VQSLOD=1.3424;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,7:23:4.77:129,5,0	0/1:4,1:5:3.14:3,0,72	0/0:24,0:9:8.68:0,9,50	0/0:27,0:18:17.39:0,17,98	0/1:23,4:27:30.96:31,0,184	1/1:8,7:17:2.26:112,2,0	0/1:6,6:11:4.65:83,0,5	0/1:24,2:27:55.89:66,0,56	0/1:10,1:11:11.93:12,0,122	1/1:11,8:21:4.16:117,4,0	0/1:9,11:22:5.22:181,0,5	0/1:10,2:13:19.36:24,0,19	0/1:8,2:9:5.91:41,0,6	1/1:14,2:17:7.35:41,7,0	0/0:16,3:19:26.50:0,27,304	0/1:16,1:18:3.69:4,0,208	0/0:5,0:14:17.27:0,17,94	0/1:22,4:26:44.23:44,0,181	1/1:19,6:26:5.80:139,6,0	1/1:13,19:33:8.65:293,9,0	1/1:4,1:5:2.74:18,3,0	1/1:7,5:12:8.55:54,9,0	1/1:13,9:25:7.02:135,7,0	1/1:6,2:9:10.70:59,11,0	0/1:21,2:23:15.61:16,0,184	1/1:13,2:17:15.47:82,15,0	0/1:20,12:32:9.79:144,0,10	0/1:6,4:11:28.21:58,0,28
chr10	94589169	.	TTTTTG	T	2014.16	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=8.554;DP=694;FS=1.327;HRun=0;HaplotypeScore=126.0364;InbreedingCoeff=0.6418;MQ=70.89;MQ0=7;MQRankSum=1.560;QD=25.18;ReadPosRankSum=0.798;VQSLOD=3.3987;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,18:24:48.16:895,48,0	0/0:6,0:6:15.05:0,15,430	0/0:38,0:25:16.38:0,16,486	0/0:52,0:31:5.45:0,5,621	0/0:24,0:24:54.19:0,54,1480	0/0:26,0:25:60.21:0,60,1714	0/0:17,0:17:33.11:0,33,925	0/0:26,0:26:39.13:0,39,1070	0/0:29,0:29:63.21:0,63,1754	0/0:29,0:29:57.19:0,57,1517	0/0:25,0:25:66.23:0,66,1870	0/0:23,0:23:42.14:0,42,1190	0/0:18,0:18:39.13:0,39,1020	0/0:25,0:25:60.21:0,60,1607	0/0:17,0:17:36.12:0,36,990	0/0:27,0:27:60.21:0,60,1707	1/1:7,26:33:66:1230,66,0	0/1:13,0:13:1.81:2,0,713	0/0:24,0:21:30.09:0,30,727	0/0:35,0:35:81.27:0,81,2178	0/1:10,0:10:16.27:16,0,578	0/0:17,0:17:48.16:0,48,1376	0/0:21,0:21:45.15:0,45,1238	0/0:24,0:24:42.14:0,42,1152	0/0:36,0:36:75.26:0,75,2097	0/0:28,0:28:63.21:0,63,1731	0/0:33,0:33:78.27:0,78,2212	0/0:14,0:14:15.05:0,15,321
chr10	94589263	.	CA	C	7642.07	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=17.748;DP=677;FS=3.043;HRun=2;HaplotypeScore=88.7295;InbreedingCoeff=0.9993;MQ=62.79;MQ0=0;MQRankSum=0.160;QD=31.32;ReadPosRankSum=1.457;VQSLOD=4.6318;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1550	0/0:7,0:7:21.07:0,21,315	0/0:19,0:18:51.12:0,51,705	0/0:24,0:22:63.19:0,63,883	0/0:17,0:17:51.16:0,51,745	1/1:2,13:15:39.12:483,39,0	1/1:0,24:24:66.21:818,66,0	1/1:0,22:22:66.18:803,66,0	0/0:23,0:23:69.20:0,69,993	0/0:22,0:22:66.22:0,66,972	0/0:14,0:14:36.12:0,36,538	1/1:0,24:24:60.19:743,60,0	1/1:0,31:31:84.26:1040,84,0	1/1:0,30:30:75.24:929,75,0	0/0:32,0:32:96.33:0,96,1439	0/0:23,0:23:69.23:0,69,1034	0/0:35,0:35:90.23:0,90,1321	0/0:11,0:11:33.04:0,33,444	0/0:26,0:26:78.26:0,78,1168	0/0:16,0:16:45.14:0,45,654	0/0:41,0:41:99:0,117,1709	1/1:1,20:22:54.17:669,54,0	1/1:4,14:18:33.10:409,33,0	1/1:1,37:38:96.25:1190,96,0	0/0:27,0:27:81.25:0,81,1158	0/0:21,0:21:63.21:0,63,944	0/0:39,0:37:99:0,117,1700	1/1:0,20:20:45.14:558,45,0
chr10	94590041	.	A	AT	5157.90	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-14.727;DP=540;FS=5.479;HRun=8;HaplotypeScore=44.8419;InbreedingCoeff=0.9819;MQ=64.89;MQ0=0;MQRankSum=-0.620;QD=30.52;ReadPosRankSum=0.871;VQSLOD=4.7521;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:48.02:0,48,439	0/0:7,0:7:21.01:0,21,192	0/0:8,0:8:20.91:0,21,187	0/0:4,0:4:8.99:0,9,81	0/0:29,0:29:81.04:0,81,741	0/0:31,0:31:90.04:0,90,823	0/0:9,0:9:27.01:0,27,247	0/0:30,0:30:78.03:0,78,714	0/0:19,0:19:57.03:0,57,521	1/1:4,28:32:84.24:960,84,0	1/1:3,26:29:75.22:866,75,0	0/0:19,0:19:51.03:0,51,467	0/0:17,0:17:48.01:0,48,434	0/0:20,0:20:57.02:0,57,518	0/0:16,0:16:45.02:0,45,412	0/0:18,0:18:51.01:0,51,462	0/0:27,0:27:78.04:0,78,714	0/0:22,0:22:65.98:0,66,591	1/1:2,20:22:60.18:693,60,0	1/1:2,26:28:78.17:884,78,0	1/1:0,12:12:36.11:415,36,0	0/0:21,0:21:60.01:0,60,544	0/0:17,1:18:13.40:0,13,377	0/0:9,0:9:27.01:0,27,247	0/0:20,0:20:54.01:0,54,490	1/1:3,22:25:66.18:752,66,0	1/1:2,19:21:51.15:589,51,0	0/0:8,0:8:18.01:0,18,165
chr10	94590520	.	CT	C	418.60	PASS	AB=0.905;AC=7;AF=0.125;AN=56;BaseQRankSum=2.823;DP=571;FS=0.000;HRun=14;HaplotypeScore=79.1222;InbreedingCoeff=0.1980;MQ=67.11;MQ0=3;MQRankSum=0.137;QD=2.67;ReadPosRankSum=1.218;VQSLOD=-0.3839;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,32:39:59.01:478,59,0	0/0:5,0:5:11.98:0,12,101	0/1:20,1:13:25.96:26,0,136	0/0:15,0:7:2.22:0,2,8	0/0:25,0:25:5.47:0,5,234	0/0:16,1:17:27.47:0,27,397	0/0:13,0:15:20.81:0,21,170	0/1:29,2:31:0.06:0,0,384	0/0:15,0:16:25.63:0,26,271	0/1:19,3:24:14.20:14,0,267	0/1:22,3:25:1.58:2,0,384	0/0:19,0:19:24.43:0,24,356	0/0:23,0:23:39.03:0,39,358	0/0:17,1:19:25.16:0,25,350	0/0:26,0:27:37.66:0,38,372	0/0:16,0:16:22.61:0,23,265	0/0:21,4:29:24.04:0,24,439	0/0:14,0:16:32.65:0,33,265	0/0:25,0:27:47.51:0,48,488	0/0:27,2:29:31.74:0,32,482	0/0:11,0:12:5.84:0,6,42	0/1:14,3:17:19.74:20,0,253	0/0:14,0:14:33.02:0,33,299	0/0:11,0:11:8.23:0,8,204	0/0:15,0:17:33.43:0,33,322	0/0:18,0:22:44.81:0,45,379	0/0:18,2:21:21.26:0,21,312	0/0:18,1:19:27.40:0,27,378
chr10	94590534	.	TA	T	928.13	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=2.137;DP=570;FS=0.534;HRun=3;HaplotypeScore=71.5329;InbreedingCoeff=0.9349;MQ=72.56;MQ0=3;MQRankSum=-0.586;QD=8.00;ReadPosRankSum=-3.050;VQSLOD=-0.2946;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:44.06:0,44,238	1/1:6,0:6:5.96:47,6,0	0/0:32,1:22:14.51:0,15,334	0/0:17,0:11:25.81:0,26,227	1/1:18,3:21:30.12:298,30,0	0/0:21,0:21:62:0,62,667	0/0:13,0:13:33.05:0,33,343	0/0:26,0:26:45.93:0,46,711	1/1:12,1:13:6.76:91,7,0	0/0:27,0:27:73.13:0,73,698	0/0:28,0:28:75.05:0,75,787	0/0:17,0:17:47.35:0,47,532	0/0:16,0:16:45.08:0,45,516	0/0:20,0:20:47.74:0,48,600	1/1:24,1:26:29.08:249,29,0	1/1:15,1:16:7.01:146,7,0	0/0:29,0:29:72.26:0,72,781	1/1:16,0:16:14.22:130,14,0	0/0:23,0:23:66.12:0,66,729	0/0:28,0:28:49.70:0,50,768	0/0:8,0:8:24:0,24,216	0/0:19,0:19:51.73:0,52,498	0/0:19,0:19:51.08:0,51,531	0/0:14,0:14:39.04:0,39,417	1/1:17,1:18:13.59:153,14,0	0/0:20,0:20:47.90:0,48,520	0/0:20,0:20:50.11:0,50,528	0/0:19,0:19:47.45:0,47,580
chr10	94590848	.	ATT	A	67.75	PASS	AB=0.692;AC=1;AF=0.018;AN=56;BaseQRankSum=3.391;DP=520;FS=5.104;HRun=2;HaplotypeScore=62.1751;InbreedingCoeff=-0.0187;MQ=66.32;MQ0=0;MQRankSum=-3.374;QD=7.53;ReadPosRankSum=2.259;VQSLOD=0.6743;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.28:0,90,1779	0/0:8,0:8:24.08:0,24,479	0/0:19,0:18:54.16:0,54,983	0/0:21,0:21:63.19:0,63,1180	0/0:12,0:12:30.10:0,30,609	0/0:11,0:11:30.10:0,30,609	0/0:27,0:27:81.23:0,81,1582	0/0:29,0:29:87.29:0,87,1734	0/0:29,0:29:84.29:0,84,1704	0/0:11,0:11:30.10:0,30,609	0/0:12,0:12:36.12:0,36,691	0/0:26,0:26:78.27:0,78,1572	0/0:24,0:24:72.25:0,72,1451	0/0:14,0:14:42.14:0,42,842	0/0:28,0:28:84.29:0,84,1685	0/0:23,0:23:69.21:0,69,1303	0/0:29,0:29:84.29:0,84,1705	0/0:19,0:19:57.20:0,57,1141	0/0:8,0:8:24.08:0,24,464	0/0:15,0:15:42.14:0,42,852	0/0:23,0:23:69.18:0,69,1346	0/0:8,0:8:21.07:0,21,416	0/0:7,0:7:21.07:0,21,425	0/0:16,0:16:48.16:0,48,975	0/0:15,0:15:36.12:0,36,731	0/0:16,0:16:48.16:0,48,954	0/0:31,0:31:93.32:0,93,1874	0/1:5,4:9:99:142,0,278
chr10	94591825	.	TTG	T	3088.57	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-7.121;DP=803;FS=10.717;HRun=0;HaplotypeScore=170.1257;InbreedingCoeff=0.6597;MQ=56.50;MQ0=9;MQRankSum=6.777;QD=12.35;ReadPosRankSum=6.308;VQSLOD=2.5790;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:11.99:0,12,92	1/1:3,4:7:6.02:70,6,0	0/0:44,0:28:11.46:0,11,153	0/0:47,0:24:29.54:0,30,338	1/1:6,16:22:39.12:457,39,0	0/1:8,0:23:2.14:2,0,67	0/1:27,0:27:12.17:12,0,226	0/0:24,0:24:14.43:0,14,161	1/1:6,17:23:39.11:457,39,0	0/0:33,0:31:43.57:0,44,391	0/0:17,0:17:12.90:0,13,97	0/0:10,0:39:14.34:0,14,148	0/0:10,0:40:24.04:0,24,232	0/0:10,0:30:20.11:0,20,177	1/1:9,33:43:74.89:836,75,0	1/1:11,24:36:12.50:576,13,0	0/0:26,0:26:17.89:0,18,185	1/1:7,14:21:29.92:330,30,0	0/0:22,0:21:8.04:0,8,49	0/0:20,0:20:3.10:0,3,13	0/0:56,0:53:10.45:0,10,94	0/1:27,0:27:44.99:45,0,51	0/0:3,0:19:3.01:0,3,39	0/0:14,0:31:14.68:0,15,162	1/1:0,19:20:42.12:492,42,0	0/0:30,0:30:46.96:0,47,355	0/0:25,0:26:18.09:0,18,172	0/0:12,0:11:9.33:0,9,49
chr10	94591849	.	GTA	G	1867.23	PASS	AB=0.983;AC=24;AF=0.429;AN=56;BaseQRankSum=5.345;DP=768;FS=2.058;HRun=0;HaplotypeScore=182.3111;InbreedingCoeff=-0.3160;MQ=49.92;MQ0=10;MQRankSum=4.233;QD=3.38;ReadPosRankSum=4.159;VQSLOD=2.2653;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:34:28.60:223,29,0	0/1:6,0:6:17.97:18,0,27	0/0:27,0:14:15.25:0,15,254	0/0:40,0:17:36.89:0,37,350	0/1:23,0:23:92.61:107,0,93	0/1:21,0:21:11.73:12,0,184	0/1:22,1:23:83.91:84,0,273	0/1:37,0:35:77.27:77,0,505	0/1:23,0:23:86.29:86,0,93	0/1:28,1:27:56.42:56,0,158	0/1:17,0:17:14.88:17,0,15	0/0:32,0:32:35.56:0,36,358	0/0:38,0:38:45.20:0,45,417	0/0:30,0:30:38.17:0,38,345	0/1:49,1:49:99:165,0,209	0/1:34,0:34:99:128,0,165	0/1:17,0:17:34.79:97,0,35	0/1:23,0:22:57.27:57,0,101	0/1:24,0:19:30.42:30,0,164	1/1:17,0:16:13.44:74,13,0	1/1:42,0:37:17.23:126,17,0	0/1:26,3:29:99:147,0,164	0/0:16,0:16:12:0,12,120	0/0:31,0:31:15.79:0,16,289	0/1:27,0:27:88.02:88,0,117	0/1:41,1:42:83.58:319,0,84	0/1:23,0:23:48.75:74,0,49	0/1:8,1:8:36.42:56,0,36
chr10	94591851	.	ATG	A	954.73	PASS	AB=0.886;AC=9;AF=0.161;AN=56;BaseQRankSum=7.719;DP=767;FS=5.195;HRun=0;HaplotypeScore=189.3916;InbreedingCoeff=0.0382;MQ=50.18;MQ0=9;MQRankSum=-2.309;QD=4.22;ReadPosRankSum=-2.055;VQSLOD=2.4069;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:35:15.46:0,15,117	0/0:6,0:6:11.04:0,11,102	0/0:27,0:15:30.07:0,30,441	0/0:36,0:16:33.04:0,33,441	0/0:23,0:23:52.67:0,53,436	0/0:22,0:22:15.91:0,16,351	0/1:22,0:22:5.09:5,0,435	0/0:36,0:34:79.24:0,79,1157	0/0:25,0:25:60.84:0,61,551	0/1:25,5:28:99:218,0,249	0/0:11,6:17:12.90:0,13,97	0/0:32,0:32:35:0,35,563	0/0:39,0:39:51.04:0,51,769	0/0:30,0:30:41.70:0,42,579	0/0:51,0:50:95.86:0,96,924	0/0:37,0:37:84.54:0,85,734	0/0:18,0:18:19.36:0,19,189	0/0:24,0:23:47.57:0,48,443	0/1:25,0:20:70.36:70,0,292	1/1:13,5:17:7.15:96,7,0	0/1:27,11:33:17.94:33,0,18	0/1:29,0:29:27.42:27,0,318	0/0:16,0:16:12.04:0,12,193	0/0:30,0:30:32.71:0,33,458	0/0:27,0:27:61.17:0,61,540	0/1:25,16:41:99:594,0,206	0/1:19,4:23:49.71:50,0,153	0/0:7,0:6:11.92:0,12,132
chr10	94591855	.	G	GTA	825.29	PASS	AB=0.903;AC=8;AF=0.143;AN=56;BaseQRankSum=10.143;DP=776;FS=0.528;HRun=0;HaplotypeScore=197.6984;InbreedingCoeff=0.0263;MQ=51.21;MQ0=9;MQRankSum=-5.646;QD=4.05;ReadPosRankSum=1.226;VQSLOD=2.4937;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:35:32.91:0,33,260	0/0:6,0:6:12.04:0,12,183	0/0:31,0:18:45.10:0,45,582	0/0:36,0:18:41.90:0,42,549	0/0:23,0:23:57.19:0,57,868	0/1:20,1:21:19.28:19,0,283	0/0:22,0:22:41.10:0,41,473	0/0:38,0:36:85.75:0,86,1172	0/0:25,0:25:68.88:0,69,980	0/1:27,7:32:99:297,0,205	0/0:13,3:16:8.73:0,9,87	0/0:31,0:31:5.96:0,6,412	0/0:40,0:40:46.23:0,46,548	0/0:31,0:31:28.55:0,29,455	0/0:51,0:50:99:0,120,1743	0/0:34,0:34:84.27:0,84,1256	0/0:18,0:18:27.64:0,28,192	0/0:22,0:21:51.17:0,51,770	0/1:25,1:21:75.54:76,0,157	1/1:18,1:18:4.15:59,4,0	0/1:37,0:32:23.05:23,0,35	0/0:29,0:29:37.30:0,37,443	0/0:18,0:18:15.03:0,15,193	0/0:29,0:29:5.02:0,5,366	0/0:27,0:27:66.21:0,66,988	0/1:35,8:43:99:426,0,136	0/1:19,5:24:36.93:58,0,37	0/0:7,0:6:14.73:0,15,132
chr10	94591857	.	G	GTA	1235.67	PASS	AB=0.925;AC=9;AF=0.161;AN=56;BaseQRankSum=8.835;DP=782;FS=5.092;HRun=0;HaplotypeScore=198.4564;InbreedingCoeff=0.0469;MQ=51.98;MQ0=8;MQRankSum=-3.001;QD=5.24;ReadPosRankSum=-1.102;VQSLOD=2.6439;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:34:30.43:0,30,239	0/0:5,0:5:12.04:0,12,183	0/0:33,0:18:35.24:0,35,498	0/0:34,0:18:38.86:0,39,503	0/0:22,0:23:55:0,55,733	0/0:22,0:22:19.80:0,20,297	0/1:22,0:22:6.76:7,0,368	0/0:39,0:37:91.24:0,91,1204	0/0:24,0:25:66.04:0,66,932	0/1:29,7:34:99:421,0,156	0/0:14,3:17:8.72:0,9,85	0/0:32,0:32:36.88:0,37,470	0/0:41,0:41:41:0,41,510	0/0:33,0:33:29.43:0,29,452	0/0:49,0:49:99:0,121,1546	0/0:35,0:35:88.90:0,89,1045	0/0:20,0:20:24.14:0,24,159	0/0:23,0:22:52.22:0,52,672	0/1:25,1:21:99:125,0,267	1/1:18,1:19:8.72:88,9,0	0/1:35,0:31:17.73:26,0,18	0/1:30,0:30:24.30:24,0,328	0/0:17,0:17:23.93:0,24,252	0/0:27,0:27:20.08:0,20,413	0/0:26,0:26:65.67:0,66,846	0/1:34,8:42:99:575,0,123	0/1:20,5:25:38.01:109,0,38	0/0:7,0:6:11.76:0,12,125
chr10	94591865	.	A	ATG	410.13	PASS	AB=0.946;AC=7;AF=0.125;AN=56;BaseQRankSum=9.767;DP=747;FS=0.000;HRun=0;HaplotypeScore=194.9497;InbreedingCoeff=0.0359;MQ=52.76;MQ0=6;MQRankSum=-5.601;QD=2.47;ReadPosRankSum=1.615;VQSLOD=2.6802;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:27:6.23:0,6,345	0/0:7,0:7:15.04:0,15,197	0/0:36,0:23:60.20:0,60,825	0/0:27,0:16:29.93:0,30,420	0/0:26,0:26:66.19:0,66,920	0/0:25,0:25:34.62:0,35,491	0/1:19,0:19:38.51:39,0,312	0/0:36,0:34:81.54:0,82,1163	0/0:26,0:26:72.24:0,72,1028	0/1:33,1:32:99:132,0,297	0/0:16,0:16:11.15:0,11,94	0/0:31,0:31:47.02:0,47,639	0/0:37,0:37:57.18:0,57,802	0/0:35,0:35:43.38:0,43,699	0/0:45,0:44:99:0,114,1589	0/0:35,0:35:99:0,99,1394	0/0:16,0:16:1.57:0,2,4	0/0:23,0:22:55.87:0,56,828	0/1:21,3:20:97.43:97,0,281	0/0:21,2:22:9.74:0,10,172	1/1:24,3:25:1.61:6,2,0	0/0:31,0:31:17.74:0,18,481	0/0:13,0:13:24.08:0,24,343	0/0:31,0:31:36.99:0,37,508	0/0:27,0:27:66.21:0,66,928	0/1:37,2:39:99:181,0,136	0/1:21,2:23:74.78:75,0,192	0/0:5,0:4:0.36:0,0,78
chr10	94591869	.	A	ATG	235.09	PASS	AB=0.964;AC=6;AF=0.107;AN=56;BaseQRankSum=10.118;DP=734;FS=1.931;HRun=0;HaplotypeScore=186.8624;InbreedingCoeff=0.0651;MQ=55.10;MQ0=4;MQRankSum=-5.680;QD=1.67;ReadPosRankSum=2.331;VQSLOD=2.4441;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:27:33.10:0,33,468	0/0:8,0:8:24.08:0,24,340	0/0:36,0:23:69.22:0,69,970	0/0:24,0:14:32.94:0,33,465	0/0:26,0:26:72.23:0,72,1009	0/0:27,0:27:43.50:0,43,601	0/0:21,0:21:38.04:0,38,472	0/0:36,0:34:81.21:0,81,1142	0/0:26,0:26:69.23:0,69,988	0/1:33,0:31:92.04:92,0,375	0/0:18,0:18:14.42:0,14,173	0/0:29,0:29:47.04:0,47,658	0/0:36,0:36:63.06:0,63,841	0/0:35,0:35:51.16:0,51,813	0/0:45,0:45:99:0,120,1674	0/0:34,0:34:90.29:0,90,1268	0/0:15,0:15:12.49:0,12,156	0/0:23,0:22:55.44:0,55,842	0/1:24,0:21:14.21:14,0,396	0/0:19,2:20:12.87:0,13,250	1/1:23,0:22:1.06:5,1,0	0/0:30,0:30:42.01:0,42,583	0/0:13,0:13:24.08:0,24,344	0/0:31,0:31:43.36:0,43,575	0/0:24,0:24:69.20:0,69,950	0/1:37,0:37:99:106,0,190	0/1:20,4:24:99:129,0,208	0/0:5,0:4:0.88:0,1,78
chr10	94594104	.	TTTATTATTATTA	T	1734.97	PASS	AB=0.850;AC=22;AF=0.458;AN=48;BaseQRankSum=4.403;DP=238;FS=12.373;HRun=0;HaplotypeScore=82.5136;InbreedingCoeff=0.5442;MQ=62.04;MQ0=1;MQRankSum=-5.778;QD=17.70;ReadPosRankSum=-0.152;VQSLOD=0.7012;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:7:9.03:0,9,306	1/1:2,1:3:3.01:103,3,0	./.	./.	1/1:7,3:11:12.04:232,12,0	0/0:4,0:8:9.03:0,9,291	0/0:2,0:4:3.01:0,3,97	0/0:34,0:34:36.12:0,36,1161	1/1:4,4:8:3.01:76,3,0	0/1:5,0:5:12.15:12,0,36	0/0:6,0:6:9.03:0,9,150	0/0:5,0:5:12.04:0,12,695	0/0:6,0:6:6.02:0,6,347	0/0:3,0:3:6.02:0,6,351	1/1:6,4:10:12.04:357,12,0	1/1:4,5:9:12.04:384,12,0	0/0:10,0:21:33.11:0,33,1649	0/1:4,3:7:97.35:97,0,145	1/1:10,0:9:3.01:84,3,0	1/1:5,0:5:9.03:206,9,0	1/1:9,0:9:3.90:86,4,0	./.	0/0:5,0:6:6.02:0,6,272	0/0:3,0:4:9.03:0,9,508	1/1:5,3:8:3.01:54,3,0	./.	1/1:13,0:13:9.03:214,9,0	0/0:15,0:14:27.09:0,27,1096
chr10	94594136	.	TATTATTATTATTATA	T	1672.65	PASS	AB=1.000;AC=18;AF=0.333;AN=54;BaseQRankSum=3.912;DP=187;FS=3.304;HRun=0;HaplotypeScore=81.7686;InbreedingCoeff=0.3801;MQ=53.80;MQ0=2;MQRankSum=-4.215;QD=23.23;ReadPosRankSum=1.838;VQSLOD=1.9982;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:23.91:0,24,622	0/1:4,0:4:22.31:22,0,72	0/0:5,0:5:8.19:0,8,118	0/0:2,0:1:3.01:0,3,36	0/1:8,0:8:40.99:41,0,70	0/0:9,0:9:24.03:0,24,706	0/1:3,0:3:6.58:7,0,145	0/0:24,0:23:67.75:0,68,2325	1/1:4,0:4:1.55:4,2,0	0/0:5,0:5:12.49:0,12,168	0/0:4,0:4:12.04:0,12,255	0/0:4,0:4:12.04:0,12,886	0/0:3,0:3:9.02:0,9,481	0/0:3,0:3:9.02:0,9,484	0/1:7,0:7:13.48:57,0,13	0/1:10,0:10:69.77:70,0,124	0/0:19,0:19:51.12:0,51,2642	0/1:7,0:7:15.68:16,0,336	1/1:4,1:4:10.57:199,11,0	1/1:4,3:7:21.03:472,21,0	1/1:6,1:7:20.82:296,21,0	./.	0/0:2,0:2:6.02:0,6,379	0/0:4,0:4:12.02:0,12,693	0/0:7,0:7:14.95:0,15,150	1/1:3,0:3:8.97:76,9,0	1/1:5,2:7:21.02:590,21,0	0/0:16,0:15:48.07:0,48,1620
chr10	94594145	.	TATTATA	T	1334.77	PASS	AB=0.933;AC=20;AF=0.370;AN=54;BaseQRankSum=3.994;DP=216;FS=2.770;HRun=0;HaplotypeScore=58.2762;InbreedingCoeff=0.5747;MQ=72.65;MQ0=1;MQRankSum=-3.517;QD=15.00;ReadPosRankSum=1.063;VQSLOD=2.1452;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:26.87:0,27,283	0/1:4,0:4:12.20:12,0,56	0/0:11,0:11:26.17:0,26,277	0/1:3,0:3:1.97:2,0,45	0/0:10,0:10:25.15:0,25,183	0/0:10,0:10:27.02:0,27,281	0/1:3,0:4:3.70:4,0,50	0/0:17,0:16:48.04:0,48,669	0/0:7,0:7:10.54:0,11,78	1/1:4,1:5:15.03:217,15,0	1/1:5,3:8:20.95:248,21,0	0/0:4,0:4:12.04:0,12,435	0/0:5,0:5:15.01:0,15,299	0/0:5,0:5:15.01:0,15,300	0/1:8,0:8:30.08:30,0,65	0/1:12,0:12:39.91:40,0,144	0/0:20,0:20:54.07:0,54,1205	0/1:9,0:9:1.23:1,0,146	1/1:7,0:7:19.79:184,20,0	1/1:7,0:7:20.93:227,21,0	1/1:7,0:7:20.80:181,21,0	./.	0/0:4,0:4:12.01:0,12,196	0/0:4,0:4:12.02:0,12,342	0/0:9,0:9:20.93:0,21,171	1/1:6,0:6:17.88:144,18,0	1/1:8,0:8:23.87:235,24,0	0/0:12,0:12:35.97:0,36,724
chr10	94594233	.	ATTAAC	A	6038.10	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.311;DP=439;FS=6.482;HRun=0;HaplotypeScore=85.1912;InbreedingCoeff=0.9951;MQ=86.75;MQ0=0;MQRankSum=-4.542;QD=53.43;ReadPosRankSum=2.923;VQSLOD=4.7807;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.20:0,57,1719	0/0:8,0:8:24.08:0,24,744	0/0:17,0:17:29.08:0,29,1376	0/0:15,0:15:39.13:0,39,1121	0/0:16,0:16:45.15:0,45,1353	0/0:15,0:15:39.13:0,39,1167	0/0:12,0:12:36.12:0,36,1070	0/0:30,0:30:81.27:0,81,2298	0/0:8,0:8:24.08:0,24,726	1/1:1,21:22:63.20:1282,63,0	1/1:1,11:12:24.08:504,24,0	0/0:11,0:11:33.11:0,33,1017	0/0:16,0:16:48.16:0,48,1488	0/0:18,0:18:54.19:0,54,1664	0/0:30,0:30:90.31:0,90,2774	0/0:18,0:18:51.18:0,51,1563	0/0:27,0:27:81.28:0,81,2458	0/0:14,0:14:42.14:0,42,1261	1/1:3,13:16:39.13:805,39,0	1/1:1,24:25:69.24:1447,69,0	1/1:2,9:11:24.08:504,24,0	0/0:6,0:6:18.06:0,18,550	0/0:11,0:11:30.10:0,30,868	0/0:10,0:10:30.10:0,30,930	0/0:17,0:17:45.15:0,45,1395	1/1:1,13:14:36.12:741,36,0	1/1:1,12:13:36.12:755,36,0	0/0:8,0:8:18.06:0,18,556
chr10	94594568	.	GTGACTGGA	G	1163.66	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.260;DP=686;FS=7.415;HRun=0;HaplotypeScore=166.7028;InbreedingCoeff=0.9957;MQ=82.71;MQ0=0;MQRankSum=-6.526;QD=52.89;ReadPosRankSum=-1.004;VQSLOD=2.4074;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:45.15:1259,45,0	0/0:11,0:11:33.11:0,33,1303	0/0:23,0:23:69.24:0,69,2787	0/0:18,0:18:51.17:0,51,2003	0/0:42,0:42:99:0,126,5269	0/0:32,0:32:90.31:0,90,3909	0/0:23,0:23:69.24:0,69,2998	0/0:26,0:26:78.26:0,78,3022	0/0:20,0:20:57.20:0,57,2451	0/0:24,0:24:72.25:0,72,3152	0/0:26,0:26:69.24:0,69,2827	0/0:27,0:27:75.26:0,75,3040	0/0:32,0:32:90.31:0,90,3694	0/0:29,0:29:84.29:0,84,3512	0/0:26,0:26:78.26:0,78,3165	0/0:27,0:27:78.27:0,78,3339	0/0:19,0:19:54.18:0,54,2320	0/0:16,0:16:48.16:0,48,2130	0/0:17,0:16:48.16:0,48,1829	0/0:31,0:31:87.30:0,87,3813	0/0:20,0:20:60.21:0,60,2597	0/0:30,0:30:90.29:0,90,3715	0/0:25,0:25:66.23:0,66,2924	0/0:23,0:23:69.24:0,69,2945	0/0:22,0:22:66.23:0,66,2707	0/0:34,0:34:93.32:0,93,3811	0/0:33,0:32:90.31:0,90,3725	0/0:8,0:8:21.07:0,21,876
chr10	94595524	.	CTT	C	600.42	PASS	AB=0.909;AC=5;AF=0.089;AN=56;BaseQRankSum=4.972;DP=339;FS=4.545;HRun=3;HaplotypeScore=42.2652;InbreedingCoeff=0.7390;MQ=90.18;MQ0=0;MQRankSum=-2.151;QD=21.44;ReadPosRankSum=0.441;VQSLOD=1.3218;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.22:0,72,1324	0/0:3,0:3:9.03:0,9,174	0/0:15,0:15:42.14:0,42,766	0/0:14,0:14:39.05:0,39,699	0/0:14,0:14:42.14:0,42,810	0/0:8,0:8:24.08:0,24,464	0/0:20,0:20:60.15:0,60,1089	0/0:16,0:16:48.16:0,48,926	0/0:23,0:23:66.23:0,66,1275	1/1:1,8:9:24.07:345,24,0	1/1:0,9:9:24.08:367,24,0	0/0:12,0:12:36.11:0,36,664	0/0:7,0:7:18.06:0,18,348	0/0:14,0:14:42.11:0,42,772	0/0:10,0:10:30.10:0,30,580	0/0:12,0:12:36.11:0,36,665	0/0:10,0:10:30.10:0,30,579	0/0:8,0:8:24.08:0,24,464	0/0:15,0:15:45.15:0,45,869	0/0:12,0:12:36.12:0,36,657	0/0:10,0:10:30.10:0,30,580	0/0:11,0:11:30.09:0,30,545	0/0:10,0:10:27.09:0,27,522	0/0:13,0:13:39.11:0,39,690	0/0:14,0:14:39.13:0,39,754	0/1:9,1:10:15.85:16,0,430	0/0:12,0:12:33.11:0,33,623	0/0:3,0:3:9.03:0,9,174
chr10	94596935	.	GA	G	7234.78	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=6.482;DP=627;FS=1.918;HRun=10;HaplotypeScore=76.0719;InbreedingCoeff=0.9938;MQ=67.01;MQ0=2;MQRankSum=-3.070;QD=20.73;ReadPosRankSum=0.731;VQSLOD=5.7330;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:29:52.16:0,52,804	0/0:8,0:8:24.06:0,24,265	0/0:41,0:23:29.42:0,29,297	0/0:38,0:22:12.97:0,13,203	0/0:29,0:29:75.20:0,75,827	1/1:2,23:25:65.99:573,66,0	1/1:3,14:17:35.53:312,36,0	1/1:8,27:35:77.88:664,78,0	0/0:17,0:17:39.11:0,39,431	1/1:4,24:28:71.96:620,72,0	1/1:1,22:23:65.99:573,66,0	1/1:3,15:18:29.99:260,30,0	1/1:2,13:15:38.99:339,39,0	1/1:2,13:15:41.79:352,42,0	0/0:27,0:27:49:0,49,733	0/0:16,1:17:22.07:0,22,472	0/0:3,0:32:76.86:0,77,394	0/0:9,0:8:24.06:0,24,265	1/1:4,18:21:50.99:442,51,0	1/1:8,26:34:77.96:677,78,0	1/1:0,14:14:38.99:339,39,0	1/1:3,14:17:38.98:339,39,0	1/1:3,10:13:29.99:260,30,0	1/1:4,16:20:44.94:384,45,0	0/0:29,0:30:84.03:0,84,893	1/1:5,17:22:32.40:398,32,0	1/1:1,24:25:62.88:547,63,0	1/1:0,6:6:18:156,18,0
chr10	94597335	.	A	AC	26603.88	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.239;DP=643;FS=3.537;HRun=0;HaplotypeScore=51.3244;InbreedingCoeff=0.9992;MQ=78.91;MQ0=0;MQRankSum=-8.469;QD=43.33;ReadPosRankSum=4.844;VQSLOD=5.0767;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:63.21:1006,63,0	1/1:0,10:10:30.10:479,30,0	0/0:18,0:18:54.18:0,54,756	0/0:11,0:11:33.11:0,33,450	1/1:0,31:31:87.30:1390,87,0	1/1:2,18:20:51.17:815,51,0	1/1:2,26:28:69.24:1103,69,0	1/1:0,44:44:99:2073,132,0	1/1:1,18:19:48.16:760,48,0	1/1:1,21:22:63.21:1002,63,0	1/1:0,31:31:87.30:1390,87,0	1/1:0,18:18:42.14:671,42,0	1/1:2,29:31:84.29:1342,84,0	1/1:1,20:21:54.18:862,54,0	1/1:1,29:30:78.27:1246,78,0	1/1:1,22:23:54.18:863,54,0	1/1:0,18:18:45.15:719,45,0	1/1:0,23:23:66.23:1054,66,0	1/1:0,28:28:81.25:1255,81,0	1/1:0,34:34:93.32:1485,93,0	1/1:0,13:13:36.12:575,36,0	1/1:0,21:21:57.19:911,57,0	1/1:0,17:17:45.15:719,45,0	1/1:0,14:14:33.11:527,33,0	1/1:0,21:21:60.20:958,60,0	1/1:0,33:33:96.33:1533,96,0	1/1:1,29:30:84.29:1341,84,0	1/1:0,11:11:33.11:527,33,0
chr10	94597621	.	G	GA	1689.85	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-10.120;DP=712;FS=0.000;HRun=7;HaplotypeScore=65.0009;InbreedingCoeff=0.9701;MQ=75.43;MQ0=0;MQRankSum=-0.901;QD=27.70;ReadPosRankSum=0.829;VQSLOD=4.2454;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,29:32:81.25:978,81,0	0/0:9,0:9:27.03:0,27,255	0/0:14,0:14:36.05:0,36,344	0/0:16,0:16:36.05:0,36,346	0/0:37,0:37:99:0,102,979	0/0:26,0:26:72.11:0,72,695	0/0:23,0:23:63.10:0,63,608	0/0:36,0:36:99:0,99,956	0/0:23,0:23:63.10:0,63,608	0/0:27,0:27:69.10:0,69,663	0/0:30,0:30:81.11:0,81,778	0/0:26,0:26:78.13:0,78,753	0/0:30,0:30:87.14:0,87,840	0/0:18,0:18:51.08:0,51,493	0/0:38,0:38:99:0,105,1002	0/0:24,0:24:66.10:0,66,637	1/1:5,24:29:69.21:833,69,0	0/0:30,0:30:78.12:0,78,753	0/0:26,0:26:63.07:0,63,600	0/0:28,0:28:81.11:0,81,776	0/0:19,0:19:51.06:0,51,486	0/0:22,0:22:66.11:0,66,637	0/0:25,0:25:69.08:0,69,654	0/0:17,0:17:42.06:0,42,406	0/0:15,0:15:42.07:0,42,406	0/0:33,0:33:90.14:0,90,869	0/0:53,0:53:99:0,141,1348	0/0:6,0:6:9.01:0,9,87
chr10	94597745	.	CAT	C	1052.91	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.661;DP=684;FS=0.743;HRun=0;HaplotypeScore=88.6788;InbreedingCoeff=0.9918;MQ=78.38;MQ0=1;MQRankSum=0.385;QD=39.00;ReadPosRankSum=1.710;VQSLOD=5.4546;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:26:78.26:1148,78,0	0/0:6,0:6:18.06:0,18,337	0/0:20,0:20:51.17:0,51,944	0/0:13,0:13:39.10:0,39,666	0/0:44,0:44:99:0,132,2458	0/0:25,0:25:75.26:0,75,1405	0/0:15,0:15:42.14:0,42,787	0/0:38,0:38:99:0,99,1807	0/0:23,0:23:69.24:0,69,1292	0/0:32,0:32:93.32:0,93,1719	0/0:36,0:36:99:0,105,1921	0/0:22,0:22:66.21:0,66,1205	0/0:26,0:26:69.24:0,69,1287	0/0:23,0:23:69.22:0,69,1253	0/0:29,0:29:84.29:0,84,1573	0/0:16,0:16:45.15:0,45,836	0/0:18,0:18:54.16:0,54,976	0/0:17,0:17:51.16:0,51,922	0/0:19,0:19:54.18:0,54,982	0/0:44,0:44:99:0,126,2243	0/0:18,0:18:54.18:0,54,988	0/0:26,0:26:72.25:0,72,1338	0/0:30,0:30:84.27:0,84,1540	0/0:14,0:14:42.14:0,42,761	0/0:26,0:26:78.27:0,78,1449	0/0:27,0:27:81.27:0,81,1474	0/0:38,0:37:99:0,114,2114	0/0:12,0:12:36.12:0,36,667
chr10	94598561	.	A	AT	8746.21	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-14.779;DP=698;FS=0.979;HRun=1;HaplotypeScore=64.2096;InbreedingCoeff=0.9975;MQ=82.93;MQ0=0;MQRankSum=-6.638;QD=38.53;ReadPosRankSum=0.955;VQSLOD=5.4172;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:66:99:0,193,2436	0/0:9,0:9:27.09:0,27,351	0/0:21,0:21:60.14:0,60,724	0/0:24,0:24:72.23:0,72,924	0/0:23,0:23:69.11:0,69,828	1/1:1,20:21:54.18:809,54,0	1/1:0,19:19:48.16:718,48,0	1/1:1,34:36:99:1506,105,0	0/0:32,0:32:93.22:0,93,1133	0/0:35,0:35:99:0,102,1276	0/0:22,0:22:60.18:0,60,766	1/1:1,28:29:75.25:1124,75,0	1/1:0,29:29:81.27:1212,81,0	1/1:0,20:20:42.14:629,42,0	0/0:30,0:30:90.29:0,90,1168	0/0:29,0:29:87.28:0,87,1118	0/0:19,0:19:51.14:0,51,645	0/0:14,0:14:36.12:0,36,467	0/0:17,0:17:51.17:0,51,662	0/0:22,0:22:66.21:0,66,857	0/0:28,0:28:84.21:0,84,1032	1/1:1,16:17:45.11:649,45,0	1/1:0,21:21:60.20:899,60,0	1/1:0,25:26:66.22:975,66,0	0/0:16,0:16:45.15:0,45,584	0/0:33,0:33:99:0,99,1231	0/0:31,0:31:87.26:0,87,1099	1/1:3,6:9:15.05:225,15,0
chr10	94598817	.	TAGCAGC	T	3818.59	PASS	AC=40;AF=0.952;AN=42;DP=496;FS=0.000;HRun=0;HaplotypeScore=142.7120;InbreedingCoeff=0.0841;MQ=66.79;MQ0=2;QD=10.02;VQSLOD=2.6056;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:22:2.74:12,3,0	1/1:5,3:8:3.01:61,3,0	./.	0/0:20,0:18:0:0,0,0	./.	1/1:14,0:20:2.55:41,3,0	1/1:13,0:20:6.02:84,6,0	./.	1/1:14,10:23:30.10:611,30,0	1/1:15,0:16:3.01:42,3,0	./.	1/1:14,0:19:15.05:204,15,0	1/1:16,0:27:27.09:377,27,0	1/1:10,0:17:15.05:210,15,0	1/1:20,14:34:33.11:621,33,0	1/1:16,8:24:18.53:344,19,0	1/1:11,0:25:12.04:168,12,0	1/1:4,5:9:6.02:122,6,0	./.	1/1:5,3:8:6.02:97,6,0	1/1:19,4:23:3.95:9,4,0	./.	1/1:9,0:9:3.01:42,3,0	1/1:18,0:23:6.38:85,6,0	1/1:13,3:16:3.01:61,3,0	./.	1/1:16,15:31:30.10:587,30,0	1/1:4,0:6:3.01:42,3,0
chr10	94599549	.	C	CTT	1618.41	PASS	AB=0.789;AC=17;AF=0.304;AN=56;BaseQRankSum=3.250;DP=538;FS=2.110;HRun=15;HaplotypeScore=92.8738;InbreedingCoeff=0.5321;MQ=66.38;MQ0=10;MQRankSum=-4.320;QD=6.66;ReadPosRankSum=-3.366;VQSLOD=0.0443;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:33:15.39:123,0,15	0/0:5,0:6:5.53:0,6,74	0/1:21,0:10:8.64:9,0,13	0/0:18,0:14:8.52:0,9,39	0/0:24,0:27:17.46:0,17,230	0/0:22,0:22:18.40:0,18,218	0/0:17,0:16:6.18:0,6,139	0/0:30,0:32:25.54:0,26,288	0/0:13,0:10:17.69:0,18,134	1/1:7,6:15:5.66:167,6,0	1/1:9,10:20:15.72:126,16,0	0/0:16,0:16:10.11:0,10,182	0/0:15,0:16:24.77:0,25,141	0/0:11,0:12:13.88:0,14,90	0/0:19,0:19:20.77:0,21,143	0/0:21,0:22:17.33:0,17,193	1/1:20,5:31:58.98:431,59,0	0/0:11,0:10:11.51:0,12,82	1/1:18,5:19:34.65:334,35,0	0/1:11,10:22:3.01:101,0,3	1/1:11,2:14:8.86:86,9,0	0/0:13,0:14:14.58:0,15,147	0/1:16,1:19:24.97:25,0,134	0/0:15,0:15:23.81:0,24,179	0/0:19,0:18:21.80:0,22,170	1/1:23,4:26:49.01:386,49,0	0/1:7,0:16:13.63:16,0,14	0/0:6,0:8:11.59:0,12,122
chr10	94599669	.	TA	T	9644.03	PASS	AB=0.579;AC=51;AF=0.911;AN=56;BaseQRankSum=-0.512;DP=495;FS=1.851;HRun=9;HaplotypeScore=52.4012;InbreedingCoeff=0.7588;MQ=74.27;MQ0=0;MQRankSum=-6.887;QD=20.56;ReadPosRankSum=4.679;VQSLOD=5.1949;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,35:38:96.01:870,96,0	1/1:0,14:14:36.02:329,36,0	0/0:15,0:14:33.55:0,34,360	0/0:11,0:10:14.92:0,15,202	1/1:1,27:28:78.03:713,78,0	1/1:1,15:16:42.02:384,42,0	1/1:2,11:13:21.01:192,21,0	1/1:4,19:23:41.79:500,42,0	1/1:2,14:16:39.02:357,39,0	1/1:6,14:20:18.64:353,19,0	1/1:0,10:10:27.01:247,27,0	1/1:2,9:11:27.01:247,27,0	1/1:1,14:15:30.01:275,30,0	1/1:2,19:21:54.02:493,54,0	1/1:2,15:17:39.02:357,39,0	1/1:5,15:20:39:357,39,0	1/1:5,33:38:75.03:686,75,0	0/1:3,8:11:10.60:168,0,11	1/1:6,15:21:44.96:403,45,0	1/1:2,21:23:59.95:538,60,0	1/1:1,6:7:9:82,9,0	1/1:2,12:14:24:220,24,0	1/1:3,13:16:36.02:329,36,0	1/1:1,14:15:39.02:357,39,0	1/1:4,15:19:45.02:412,45,0	1/1:6,17:22:40.65:362,41,0	1/1:2,9:11:24.01:220,24,0	1/1:2,7:9:21.01:192,21,0
chr10	94599922	.	TACACACACACAC	T	1250.34	PASS	AB=0.952;AC=18;AF=0.346;AN=52;BaseQRankSum=4.174;DP=424;FS=9.239;HRun=0;HaplotypeScore=134.9186;InbreedingCoeff=0.4357;MQ=64.21;MQ0=18;MQRankSum=-4.411;QD=8.87;ReadPosRankSum=0.422;VQSLOD=2.1108;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:22:5.62:167,6,0	1/1:4,0:5:3.01:44,3,0	./.	./.	1/1:7,4:11:6.02:140,6,0	0/0:13,0:11:6.47:0,6,183	0/0:25,0:25:11.77:0,12,427	0/0:12,0:11:3.01:0,3,66	1/1:10,3:13:3.01:103,3,0	0/0:11,0:10:7.84:0,8,83	0/0:9,0:9:3.01:0,3,69	0/0:23,0:23:9.03:0,9,502	0/0:15,0:14:16.30:0,16,517	0/0:13,0:16:6.02:0,6,251	1/1:22,3:24:9.03:307,9,0	1/1:14,1:17:18.52:389,19,0	0/1:17,0:19:12.63:13,0,117	1/1:11,1:12:3:102,3,0	0/0:7,0:6:0.47:0,0,1	0/0:8,0:6:6.02:0,6,107	0/0:37,0:37:15.05:0,15,421	0/0:13,0:13:5.26:0,5,236	0/0:7,0:7:2.75:0,3,67	0/0:33,0:33:17.27:0,17,902	1/1:5,0:6:3.01:84,3,0	0/1:10,0:10:60.13:60,0,121	0/0:8,0:8:3.01:0,3,34	0/0:5,0:4:6.02:0,6,116
chr10	94600398	.	TATAC	T	1142.85	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.264;DP=531;FS=0.789;HRun=0;HaplotypeScore=80.7935;InbreedingCoeff=0.9616;MQ=69.51;MQ0=0;MQRankSum=-2.821;QD=35.71;ReadPosRankSum=2.408;VQSLOD=3.7215;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,28:32:69.24:1238,69,0	0/0:8,0:8:24.07:0,24,564	0/0:9,0:9:27.09:0,27,586	0/0:6,0:6:12.04:0,12,274	0/0:17,0:17:42.14:0,42,1037	0/0:24,0:24:69.24:0,69,1712	0/0:17,0:17:39.13:0,39,1008	0/0:30,0:30:75.26:0,75,1919	0/0:25,0:25:23.57:0,24,1535	0/0:24,0:24:66.23:0,66,1715	0/0:20,0:20:60.21:0,60,1538	0/0:10,0:10:30.10:0,30,768	0/0:19,0:19:57.20:0,57,1468	0/0:12,0:12:24.08:0,24,614	0/0:12,0:12:30.10:0,30,779	0/0:14,0:14:42.13:0,42,1002	0/0:17,0:17:42.14:0,42,1079	0/0:18,0:18:54.19:0,54,1385	0/0:21,0:21:60.21:0,60,1532	0/0:29,0:29:81.28:0,81,2041	0/0:20,0:20:57.20:0,57,1480	0/0:18,0:18:51.18:0,51,1288	0/0:26,0:26:72.25:0,72,1824	0/0:12,0:12:33.11:0,33,820	0/0:30,0:30:87.30:0,87,2156	0/0:20,0:20:57.20:0,57,1423	0/0:31,0:31:87.30:0,87,2206	0/0:10,0:10:30.09:0,30,716
chr10	94601354	.	C	CT	733.99	PASS	AB=0.950;AC=17;AF=0.304;AN=56;BaseQRankSum=-0.004;DP=437;FS=3.891;HRun=15;HaplotypeScore=61.3481;InbreedingCoeff=0.5159;MQ=72.23;MQ0=4;MQRankSum=1.119;QD=3.82;ReadPosRankSum=-1.142;VQSLOD=0.4059;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:29:20.68:116,21,0	0/0:6,0:6:8.81:0,9,54	0/0:25,0:12:6.26:0,6,30	0/0:14,0:10:7.10:0,7,38	0/1:15,1:18:5.70:6,0,76	0/0:11,0:12:19.17:0,19,106	0/0:15,0:16:6.84:0,7,124	0/1:21,3:27:10.97:11,0,121	0/0:10,0:10:14.38:0,14,89	0/0:16,0:16:19.30:0,19,113	0/1:20,0:20:6.73:7,0,175	0/0:13,0:13:15.94:0,16,91	0/0:6,0:8:2.15:0,2,37	0/0:11,0:15:24.30:0,24,128	0/0:16,0:17:24.28:0,24,136	0/0:9,1:11:2.65:0,3,113	1/1:7,14:23:6.43:148,6,0	0/0:17,0:20:26.41:0,26,223	1/1:12,5:16:3.84:148,4,0	1/1:6,7:13:17.47:153,17,0	1/1:2,5:7:14.98:126,15,0	0/0:10,0:10:26.37:0,26,159	0/0:12,0:12:1.32:0,1,118	0/0:16,0:15:21.60:0,22,117	0/0:17,0:17:17.06:0,17,105	1/1:11,7:18:0.47:109,0,0	1/1:7,11:19:11.47:84,11,0	0/0:3,0:3:2.87:0,3,18
chr10	94602311	.	GGTGTGT	G	766.09	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=0.547;DP=585;FS=11.463;HRun=0;HaplotypeScore=145.4378;InbreedingCoeff=0.7403;MQ=72.96;MQ0=18;MQRankSum=-3.987;QD=5.43;ReadPosRankSum=2.096;VQSLOD=2.0313;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:42.14:0,42,1038	0/0:8,0:14:7.19:0,7,107	./.	0/0:35,0:30:0.26:0,0,1	0/0:17,0:17:14.87:0,15,313	1/1:19,6:24:9.03:163,9,0	1/1:16,5:21:3.90:63,4,0	0/0:33,0:33:26.07:0,26,410	0/0:10,0:17:9.18:0,9,236	0/0:16,0:20:27.09:0,27,682	0/0:10,0:13:15.05:0,15,421	1/1:15,2:17:6.02:121,6,0	1/1:11,2:13:11.93:198,12,0	1/1:11,2:13:3.95:91,4,0	0/0:18,0:21:18.06:0,18,382	0/0:24,0:24:15.05:0,15,353	0/0:23,0:25:15.05:0,15,275	0/0:17,0:17:17.85:0,18,440	0/0:25,0:23:18.95:0,19,491	0/0:13,0:18:8.96:0,9,138	0/0:17,0:20:6.01:0,6,75	1/1:13,0:13:1.69:10,2,0	1/1:8,6:14:9.97:184,10,0	1/1:18,1:23:6.02:103,6,0	0/0:20,0:23:14.58:0,15,359	0/0:16,0:18:33.11:0,33,830	0/0:22,0:28:21.96:0,22,446	0/0:3,0:6:6:0,6,101
chr10	94602692	.	A	AT	6105.42	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-14.192;DP=469;FS=6.324;HRun=8;HaplotypeScore=42.5481;InbreedingCoeff=0.9849;MQ=69.61;MQ0=0;MQRankSum=-0.424;QD=29.93;ReadPosRankSum=1.720;VQSLOD=4.6337;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:69.16:781,69,0	0/0:10,0:10:24.01:0,24,219	0/0:9,0:9:15.01:0,15,137	0/0:9,0:8:18.86:0,19,157	0/0:15,0:15:38.99:0,39,350	1/1:1,21:22:57.17:658,57,0	1/1:1,13:14:36.11:416,36,0	1/1:2,28:30:81.21:911,81,0	0/0:16,0:16:48.03:0,48,439	0/0:20,0:20:51.02:0,51,466	0/0:15,0:15:44.97:0,45,399	1/1:1,16:17:45.13:519,45,0	1/1:4,16:20:45.13:519,45,0	1/1:2,8:10:7.81:258,8,0	0/0:24,0:24:66.02:0,66,599	0/0:17,0:17:48.01:0,48,435	1/1:1,17:18:51.15:589,51,0	0/0:13,0:13:35.95:0,36,320	0/0:27,0:27:78.02:0,78,707	0/0:17,0:17:51.01:0,51,462	0/0:10,0:10:30.02:0,30,275	1/1:0,8:8:24.07:277,24,0	1/1:2,8:10:24.07:277,24,0	1/1:2,20:22:57.17:658,57,0	0/0:15,0:15:33.01:0,33,302	0/0:21,0:21:54:0,54,490	0/0:27,0:27:69.03:0,69,631	1/1:0,7:7:21.06:242,21,0
chr10	94602812	.	C	CT	7657	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-8.541;DP=482;FS=0.402;HRun=9;HaplotypeScore=49.0349;InbreedingCoeff=0.9386;MQ=70.42;MQ0=0;MQRankSum=-0.430;QD=22.52;ReadPosRankSum=0.680;VQSLOD=5.3860;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:27:56.82:284,57,0	0/0:6,0:6:15:0,15,130	0/0:13,0:12:13.05:0,13,168	0/0:8,0:8:6.14:0,6,112	0/0:33,0:33:62.51:0,63,682	1/1:4,21:24:60.16:663,60,0	1/1:1,11:12:30.08:332,30,0	1/1:5,29:34:87.24:962,87,0	0/0:15,0:15:41.97:0,42,361	1/1:6,19:25:57.12:609,57,0	1/1:6,21:27:63.17:697,63,0	1/1:1,5:6:12.03:133,12,0	1/1:5,10:15:33.09:364,33,0	1/1:2,10:12:24.06:265,24,0	0/0:17,0:17:44.99:0,45,391	0/0:15,0:15:35.96:0,36,309	1/1:4,0:24:45.45:227,45,0	0/0:10,0:10:26.98:0,27,234	1/1:6,11:17:10.03:329,10,0	1/1:3,20:23:33.99:563,34,0	1/1:1,4:5:9.02:100,9,0	1/1:0,3:3:6.02:66,6,0	1/1:0,12:12:36.10:398,36,0	1/1:1,12:13:21.06:232,21,0	0/0:25,0:24:59.97:0,60,518	1/1:2,22:23:40.12:667,40,0	1/1:6,21:27:45.12:498,45,0	1/1:1,8:9:24.06:265,24,0
chr10	94603561	.	G	GAGACAGACAGAC	6659.52	PASS	AB=0.973;AC=27;AF=0.482;AN=56;BaseQRankSum=-10.750;DP=744;FS=1.396;HRun=0;HaplotypeScore=276.8492;InbreedingCoeff=0.1166;MQ=64.26;MQ0=6;MQRankSum=-2.251;QD=12.42;ReadPosRankSum=1.940;VQSLOD=3.6179;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:27.02:0,27,484	1/1:3,4:7:9.03:515,9,0	0/0:29,0:19:17.70:0,18,310	0/0:34,0:25:6.26:0,6,527	0/1:15,16:32:0:0,0,0	0/0:19,0:19:24.57:0,25,388	0/1:22,0:22:26.78:27,0,215	1/1:39,0:38:31.40:381,31,0	1/1:15,19:34:24.08:1372,24,0	0/1:23,0:23:99:160,0,188	0/1:26,0:26:13.46:13,0,328	0/1:33,0:33:12.26:12,0,406	0/1:22,0:22:0.98:1,0,379	0/0:28,0:28:16.32:0,16,390	1/1:18,19:42:23.94:1184,24,0	1/1:13,24:41:27.07:1518,27,0	0/1:20,0:19:34.06:34,0,102	1/1:9,6:17:18.06:905,18,0	0/1:23,0:21:99:299,0,150	0/1:28,0:27:44.20:44,0,237	0/0:37,0:37:16.72:0,17,572	0/0:17,0:17:32.59:0,33,387	0/1:21,0:21:41.60:42,0,158	0/1:33,0:33:12.65:13,0,611	1/1:12,0:18:3.01:77,3,0	0/1:25,0:23:56.50:56,0,394	0/1:29,0:29:4.47:4,0,445	0/0:8,0:7:9.53:0,10,301
chr10	94603587	.	G	GAC	15452.28	PASS	AB=0.881;AC=39;AF=0.696;AN=56;BaseQRankSum=-5.601;DP=737;FS=15.619;HRun=0;HaplotypeScore=136.7586;InbreedingCoeff=0.2477;MQ=58.04;MQ0=23;MQRankSum=2.966;QD=24.92;ReadPosRankSum=8.843;VQSLOD=4.2234;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:24.72:0,25,356	0/1:6,0:6:33.92:42,0,34	0/0:32,0:21:51.17:0,51,766	0/1:39,0:25:12.13:12,0,580	0/0:35,0:35:26.46:0,26,358	1/1:1,16:18:36.12:695,36,0	1/1:2,18:20:42.14:811,42,0	1/1:4,26:28:50.40:1045,50,0	0/1:29,0:29:59.16:59,0,194	1/1:1,17:18:54.15:957,54,0	1/1:4,24:28:52.61:1005,53,0	0/1:2,26:29:1.99:925,0,2	1/1:4,22:25:46.24:875,46,0	1/1:0,21:20:42.14:810,42,0	0/1:40,1:41:69.80:70,0,217	0/1:35,0:35:99:104,0,179	0/0:16,0:15:0.26:0,0,239	0/1:13,0:14:17.02:17,0,194	0/1:12,16:24:7.49:837,0,7	1/1:2,20:21:28.16:784,28,0	1/1:2,42:43:65.76:1273,66,0	1/1:0,19:20:39.10:742,39,0	1/1:4,16:20:33.10:637,33,0	1/1:5,35:39:60.09:1174,60,0	0/1:14,0:16:5.19:5,0,295	1/1:2,25:23:45.22:1078,45,0	1/1:0,33:32:60.21:1158,60,0	1/1:3,6:8:11.82:337,12,0
chr10	94603631	.	CAGAGAG	C	181.08	PASS	AB=0.618;AC=2;AF=0.036;AN=56;BaseQRankSum=2.900;DP=658;FS=1.746;HRun=0;HaplotypeScore=172.2116;InbreedingCoeff=0.1641;MQ=53.22;MQ0=23;MQRankSum=-4.833;QD=3.42;ReadPosRankSum=-1.475;VQSLOD=2.6908;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,19:32:3.57:195,0,4	0/0:8,0:9:17.53:0,18,549	0/0:20,0:2:2.97:0,3,20	0/0:40,0:11:4.56:0,5,31	0/0:27,0:27:66.18:0,66,1678	0/0:12,0:12:12.04:0,12,373	0/0:18,0:18:33.10:0,33,701	0/0:34,0:30:63.98:0,64,854	0/0:24,0:24:54.12:0,54,1416	0/0:18,0:18:51.15:0,51,1333	0/0:19,0:18:27.06:0,27,650	0/0:24,0:23:38.89:0,39,811	0/0:30,0:30:65.18:0,65,1385	0/0:20,0:20:39.99:0,40,801	0/0:29,0:30:36.11:0,36,961	0/0:28,0:28:54.18:0,54,1604	0/1:6,11:18:26.03:75,0,26	0/0:11,0:11:23.71:0,24,600	0/0:15,0:13:30.07:0,30,537	0/0:22,0:22:45.13:0,45,1106	0/0:41,0:39:72.15:0,72,1551	0/0:20,0:19:26.69:0,27,545	0/0:17,0:15:36.06:0,36,820	0/0:41,0:40:66.36:0,66,1525	0/0:15,0:16:42.09:0,42,704	0/0:24,0:22:45.06:0,45,1008	0/0:34,0:33:69.05:0,69,1470	0/0:8,0:8:17.99:0,18,218
chr10	94603647	.	GAC	G	587.47	PASS	AB=0.982;AC=12;AF=0.214;AN=56;BaseQRankSum=1.348;DP=653;FS=2.666;HRun=0;HaplotypeScore=118.3119;InbreedingCoeff=-0.1427;MQ=60.01;MQ0=20;MQRankSum=0.482;QD=2.17;ReadPosRankSum=-5.491;VQSLOD=0.5560;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,1:34:18.18:18,0,43	0/0:11,0:11:15.32:0,15,352	0/0:21,0:10:18.98:0,19,127	0/1:36,0:14:7.40:7,0,80	0/0:30,0:30:75.05:0,75,1299	0/1:11,0:11:29.97:30,0,72	0/1:21,0:21:99:167,0,171	0/0:41,0:37:79.06:0,79,1231	0/0:21,0:21:54.13:0,54,989	0/0:16,0:16:48.07:0,48,813	0/0:18,0:16:22.91:0,23,505	0/1:21,1:21:5.22:5,0,259	0/1:27,1:27:90.03:90,0,270	0/1:20,0:20:72.25:72,0,198	0/0:25,0:25:29.45:0,29,691	0/0:28,0:28:63.18:0,63,1108	1/1:20,0:19:0.15:51,0,0	0/0:11,0:11:6.37:0,6,395	0/0:12,0:9:27.06:0,27,433	0/0:24,0:23:57.10:0,57,906	0/0:36,0:34:68.90:0,69,1257	0/1:19,1:19:93.40:109,0,93	0/1:16,0:15:48.23:48,0,127	0/1:40,1:40:99:133,0,330	0/0:21,0:21:39.82:0,40,727	0/0:26,0:24:60.12:0,60,889	0/0:34,0:33:77.95:0,78,1212	0/0:6,0:6:15.03:0,15,234
chr10	94603917	.	CCCTT	C	1719.18	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.927;DP=520;FS=21.506;HRun=0;HaplotypeScore=102.1041;InbreedingCoeff=0.9957;MQ=78.16;MQ0=0;MQRankSum=-5.713;QD=35.09;ReadPosRankSum=3.700;VQSLOD=1.9976;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:39.13:723,39,0	0/0:8,0:8:21.06:0,21,501	0/0:24,0:23:40.21:0,40,1205	0/0:28,0:26:60.58:0,61,1315	0/0:25,0:25:63.22:0,63,1571	0/0:30,0:30:81.28:0,81,2074	0/0:14,0:14:39.13:0,39,1004	0/0:31,0:31:93.27:0,93,2250	0/0:11,0:11:33.11:0,33,814	0/0:22,0:22:66.23:0,66,1707	0/0:15,0:15:42.14:0,42,1083	0/0:13,0:13:39.12:0,39,957	0/0:10,0:10:24.08:0,24,611	0/0:17,0:17:44.89:0,45,1168	0/0:16,0:16:48.16:0,48,1247	0/0:18,0:18:51.17:0,51,1303	1/1:3,23:26:60.21:1118,60,0	0/0:13,0:13:30.08:0,30,743	0/0:16,0:16:39.13:0,39,981	0/0:20,0:20:51.17:0,51,1282	0/0:17,0:17:51.13:0,51,1223	0/0:19,0:19:54.19:0,54,1427	0/0:13,0:13:39.13:0,39,1034	0/0:26,0:26:78.27:0,78,2073	0/0:14,0:14:39.13:0,39,1039	0/0:18,0:18:54.19:0,54,1440	0/0:22,0:22:66.22:0,66,1642	0/0:11,0:11:27.09:0,27,702
chr10	94604845	.	CGCGTGCGTGT	C	3151.10	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=6.836;DP=617;FS=10.143;HRun=0;HaplotypeScore=225.6794;InbreedingCoeff=0.7218;MQ=54.41;MQ0=5;MQRankSum=-4.181;QD=10.20;ReadPosRankSum=-1.681;VQSLOD=0.9886;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:24:7.59:95,8,0	0/0:13,0:13:24.08:0,24,606	0/0:23,0:14:17.37:0,17,178	0/0:21,0:10:14.02:0,14,304	0/0:10,0:10:6.14:0,6,308	1/1:12,0:12:12.04:288,12,0	1/1:22,0:22:5.44:71,5,0	1/1:24,0:24:30.04:341,30,0	0/0:25,0:24:36.12:0,36,1039	1/1:26,0:26:19.97:392,20,0	1/1:15,0:15:3.01:50,3,0	1/1:15,11:26:11.94:231,12,0	1/1:14,15:29:21:361,21,0	1/1:25,0:25:23.62:552,24,0	0/0:16,0:15:14.23:0,14,476	0/0:27,0:27:26.47:0,26,777	1/1:25,0:25:7.56:431,8,0	0/0:26,0:25:38.93:0,39,1516	0/0:21,0:21:17.38:0,17,682	0/0:14,0:14:24.08:0,24,337	0/0:72,0:72:99:0,138,2498	1/1:11,4:15:2.86:91,3,0	1/1:18,0:18:12.02:193,12,0	1/1:8,18:26:5.91:99,6,0	0/0:25,0:24:22.69:0,23,514	0/1:17,0:17:21.88:22,0,810	0/0:14,0:14:21.05:0,21,385	0/1:5,0:4:14.33:143,0,14
chr10	94604847	.	CGTGCGTGTGCGTGCGT	C	3143.75	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=2.531;DP=600;FS=9.767;HRun=0;HaplotypeScore=267.9173;InbreedingCoeff=0.5726;MQ=53.91;MQ0=6;MQRankSum=-2.058;QD=10.69;ReadPosRankSum=-0.060;VQSLOD=1.0364;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:8.53:205,9,0	0/0:13,0:13:24.08:0,24,756	0/0:23,0:14:16.22:0,16,181	0/0:21,0:10:13.89:0,14,372	0/0:9,0:9:17.95:0,18,464	1/1:11,0:11:5.26:205,5,0	1/1:21,0:21:4.81:70,5,0	1/1:22,0:22:30.04:408,30,0	0/0:26,0:25:39.07:0,39,1408	1/1:7,14:21:24.27:479,24,0	1/1:13,0:13:3.01:65,3,0	1/1:23,0:23:11.90:116,12,0	0/1:28,0:28:30.56:211,0,31	1/1:24,0:24:18.39:604,18,0	0/0:15,0:14:13.93:0,14,668	0/0:27,0:27:47.71:0,48,1195	0/1:26,0:26:99:482,0,123	0/0:26,0:25:63.06:0,63,2195	0/0:22,0:22:48.61:0,49,1080	0/0:14,0:14:24.08:0,24,535	0/0:74,0:74:99:0,138,3725	1/1:14,0:14:2.80:64,3,0	1/1:18,0:17:12.02:256,12,0	1/1:25,0:25:3.05:37,3,0	0/0:22,0:21:23.79:0,24,657	0/1:19,0:19:35.80:36,0,1280	0/0:14,0:14:21.05:0,21,571	0/1:5,0:4:73.65:105,0,74
chr10	94604849	.	TGC	T	128.71	PASS	AB=0.714;AC=3;AF=0.054;AN=56;BaseQRankSum=6.548;DP=588;FS=3.823;HRun=0;HaplotypeScore=169.6469;InbreedingCoeff=0.3986;MQ=53.69;MQ0=6;MQRankSum=-5.447;QD=2.48;ReadPosRankSum=0.111;VQSLOD=2.7768;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,10:25:19.81:20,0,44	0/0:13,1:14:29.28:0,29,564	0/0:23,0:14:25.23:0,25,432	0/0:21,0:10:17.68:0,18,311	0/0:8,1:9:7.57:0,8,261	0/0:11,0:11:13.42:0,13,102	0/0:19,0:19:5.79:0,6,62	0/0:18,0:18:45.07:0,45,588	0/0:26,0:25:42.09:0,42,771	0/0:21,0:21:6.75:0,7,238	0/0:12,0:12:2.97:0,3,20	0/0:22,1:23:16.02:0,16,217	0/0:28,0:28:10.36:0,10,156	0/0:22,1:23:28.29:0,28,172	0/0:15,0:14:23.58:0,24,460	0/0:25,0:25:48.03:0,48,710	1/1:18,9:27:18.32:211,18,0	0/0:28,0:27:69.65:0,70,1209	0/0:22,0:22:41.17:0,41,908	0/0:14,0:14:33.07:0,33,597	0/0:69,0:69:99:0,169,3055	0/0:13,1:14:6.28:0,6,123	0/0:18,0:17:24.21:0,24,390	0/0:24,0:24:11.40:0,11,150	0/0:22,0:21:40.10:0,40,645	0/0:19,0:19:55.56:0,56,932	0/0:13,0:13:33.08:0,33,567	0/0:5,0:4:7.49:0,7,28
chr10	94604853	.	TGTGC	T	2566.25	PASS	AB=0.992;AC=33;AF=0.589;AN=56;BaseQRankSum=8.188;DP=583;FS=7.329;HRun=0;HaplotypeScore=174.3776;InbreedingCoeff=0.5196;MQ=53.11;MQ0=6;MQRankSum=-3.777;QD=7.37;ReadPosRankSum=-1.771;VQSLOD=2.1072;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:6.64:56,7,0	0/1:13,0:13:5.54:6,0,423	0/0:19,0:12:17.53:0,18,177	0/0:21,0:10:14.15:0,14,229	0/1:9,0:9:60.70:61,0,201	1/1:10,2:12:12.04:205,12,0	1/1:17,2:19:5.41:71,5,0	1/1:18,0:18:30.03:322,30,0	0/0:26,0:25:3.41:0,3,707	1/1:18,2:20:19.49:253,19,0	1/1:1,11:12:3.01:50,3,0	1/1:17,1:18:11.84:155,12,0	1/1:23,4:27:20.70:266,21,0	1/1:18,3:21:23.54:389,24,0	0/0:15,0:14:15.01:0,15,299	0/1:25,0:25:2.44:2,0,535	1/1:28,0:28:32.28:460,32,0	0/0:30,0:29:27.18:0,27,1018	0/1:23,1:24:7.93:8,0,490	0/0:14,0:14:12.63:0,13,204	0/0:69,0:69:99:0,137,1423	1/1:8,2:11:2.93:48,3,0	1/1:13,5:17:11.95:148,12,0	1/1:25,2:27:7.85:93,8,0	0/0:20,0:19:0.79:0,1,338	0/0:19,1:20:5.83:0,6,632	0/1:12,0:12:3.52:4,0,242	1/1:3,2:4:9.03:160,9,0
chr10	94604855	.	TGC	T	315.34	PASS	AB=0.951;AC=14;AF=0.250;AN=56;BaseQRankSum=9.762;DP=577;FS=32.596;HRun=0;HaplotypeScore=171.1914;InbreedingCoeff=0.2283;MQ=50.66;MQ0=7;MQRankSum=-5.430;QD=1.63;ReadPosRankSum=2.638;VQSLOD=1.4163;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,10:29:3.61:4,0,53	0/0:11,0:11:21.05:0,21,457	0/0:18,0:10:20.81:0,21,351	0/0:20,0:10:18.37:0,18,329	0/1:10,0:10:18.18:18,0,210	0/1:12,0:12:11.18:43,0,11	0/0:23,0:23:8.41:0,8,59	0/0:18,0:18:11.26:0,11,151	0/0:25,0:24:39.08:0,39,718	0/1:21,0:21:25.46:25,0,146	0/1:14,0:14:3.54:4,0,19	0/1:17,1:18:11.60:12,0,33	0/1:27,0:27:10.92:11,0,36	1/1:18,0:19:11.56:95,12,0	0/0:15,0:14:23.57:0,24,394	0/0:24,0:24:44.80:0,45,684	1/1:18,9:28:15.77:208,16,0	0/0:31,0:30:44.64:0,45,1125	0/0:21,0:21:36.48:0,36,861	0/0:13,0:13:29.78:0,30,508	0/0:70,0:68:99:0,150,2539	0/1:10,1:11:6.16:6,0,18	0/0:15,0:15:0.92:0,1,104	0/0:27,0:27:6.82:0,7,84	0/0:20,0:19:30.27:0,30,514	0/0:20,0:20:46.65:0,47,926	0/0:11,0:11:26.90:0,27,448	1/1:5,0:4:8.66:48,9,0
chr10	94604857	.	C	CAT	2907.27	PASS	AB=0.829;AC=28;AF=0.500;AN=56;BaseQRankSum=3.482;DP=579;FS=10.076;HRun=0;HaplotypeScore=164.8738;InbreedingCoeff=0.2255;MQ=50.58;MQ0=8;MQRankSum=-2.901;QD=7.97;ReadPosRankSum=-0.469;VQSLOD=2.5422;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,7:27:15.76:129,16,0	0/1:12,0:12:7.56:8,0,364	0/0:18,0:10:21.04:0,21,263	0/0:20,0:10:8.70:0,9,290	0/1:9,0:10:48.22:48,0,171	1/1:5,6:12:11.65:187,12,0	0/1:7,15:24:79.39:110,0,79	1/1:10,7:18:11.17:627,11,0	0/0:20,0:24:16.93:0,17,563	0/1:20,0:20:57.96:58,0,68	0/1:14,0:14:23.69:24,0,34	1/1:15,3:18:13.38:201,13,0	1/1:22,5:27:7.24:249,7,0	1/1:4,15:19:24.54:451,25,0	0/0:10,0:14:20.87:0,21,287	0/1:14,0:25:83.84:84,0,482	0/1:15,11:27:26.39:361,0,26	0/1:23,0:32:58.50:59,0,866	0/0:22,0:22:42.25:0,42,803	0/0:13,0:13:32.39:0,32,438	0/0:69,0:67:99:0,150,2333	1/1:10,1:11:2.98:23,3,0	1/1:14,2:15:18.03:280,18,0	0/1:24,3:27:70.68:71,0,73	0/1:13,0:19:11.78:12,0,378	0/0:20,0:20:41.31:0,41,795	0/0:11,0:11:20.89:0,21,357	1/1:3,2:4:6.91:120,7,0
chr10	94604865	.	TGC	T	535.60	PASS	AB=0.991;AC=18;AF=0.321;AN=56;BaseQRankSum=9.050;DP=557;FS=6.652;HRun=0;HaplotypeScore=170.8995;InbreedingCoeff=0.3487;MQ=47.94;MQ0=9;MQRankSum=-5.188;QD=2.41;ReadPosRankSum=2.594;VQSLOD=2.1311;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,4:26:1.18:21,1,0	0/0:11,0:11:27.09:0,27,484	0/0:11,0:4:3.01:0,3,36	0/0:17,1:8:17.72:0,18,233	0/0:10,0:10:18.03:0,18,282	1/1:13,0:13:7.71:52,8,0	0/0:26,0:26:14.14:0,14,167	0/1:12,0:12:30.33:30,0,35	0/0:26,0:25:42.06:0,42,723	0/1:17,0:17:19.56:54,0,20	0/1:15,0:15:12.81:13,0,42	1/1:17,0:17:5.51:21,6,0	1/1:23,1:24:9.05:38,9,0	0/1:18,0:18:10.29:124,0,10	0/0:16,0:15:26.55:0,27,453	0/0:26,0:26:47.55:0,48,700	1/1:25,2:27:35.20:220,35,0	0/0:33,0:32:75.14:0,75,1237	0/0:24,0:22:39.89:0,40,476	0/0:10,0:10:9.84:0,10,229	0/0:64,0:62:99:0,126,1538	0/0:12,0:11:0.40:0,0,51	0/1:16,1:16:21.07:75,0,21	0/1:29,0:29:17.11:17,0,96	0/0:20,0:19:32.39:0,32,525	0/0:19,0:19:26:0,26,503	0/0:9,0:9:21.50:0,21,262	1/1:7,0:6:5.74:44,6,0
chr10	94604871	.	TGC	T	1063.80	PASS	AB=0.901;AC=23;AF=0.426;AN=54;BaseQRankSum=8.090;DP=561;FS=1.675;HRun=0;HaplotypeScore=171.6261;InbreedingCoeff=0.2793;MQ=46.73;MQ0=9;MQRankSum=-4.153;QD=3.62;ReadPosRankSum=0.728;VQSLOD=3.0632;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:0.04:15,0,0	0/0:12,0:12:30.07:0,30,494	./.	0/0:15,1:8:14.95:0,15,165	0/0:11,0:11:2.08:0,2,292	1/1:10,4:15:14.76:121,15,0	0/1:22,3:25:2.11:2,0,166	0/1:14,0:14:0.36:0,0,188	0/0:27,0:26:42.08:0,42,718	1/1:17,0:18:6.81:70,7,0	0/0:18,0:20:6.22:0,6,17	1/1:13,2:15:4.94:21,5,0	1/1:20,3:24:14.40:90,14,0	0/1:13,2:16:1.58:145,0,2	0/0:17,0:16:29.57:0,30,449	0/0:23,0:23:41.48:0,41,633	1/1:18,10:28:41.50:403,42,0	0/0:36,0:35:78.31:0,78,1243	0/1:20,1:19:43.33:43,0,326	0/1:10,1:11:24.51:25,0,86	0/0:63,0:61:77.12:0,77,896	0/1:9,3:12:20.61:21,0,28	0/1:16,2:17:12.10:78,0,12	0/1:33,2:34:98.21:98,0,126	0/0:20,0:19:32.23:0,32,372	0/0:16,0:16:6.51:0,7,258	0/1:7,1:8:14.29:14,0,100	1/1:5,2:6:12.41:90,12,0
chr10	94604873	.	C	CGT	1306.97	PASS	AB=0.938;AC=24;AF=0.444;AN=54;BaseQRankSum=-0.470;DP=559;FS=12.109;HRun=0;HaplotypeScore=175.0627;InbreedingCoeff=-0.0079;MQ=46.47;MQ0=10;MQRankSum=-0.131;QD=3.49;ReadPosRankSum=-2.691;VQSLOD=1.4083;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:3.50:9,4,0	0/0:13,0:13:24.03:0,24,287	./.	0/1:14,0:6:6.38:11,0,6	0/0:12,0:12:2.08:0,2,208	0/1:13,0:13:10.18:48,0,10	0/1:24,5:28:52.61:193,0,53	0/1:18,0:17:96.66:97,0,138	0/0:27,0:26:28.47:0,28,436	0/1:19,0:19:10.50:10,0,47	0/0:18,0:18:10.71:0,11,43	0/0:15,1:16:3.93:0,4,28	1/1:24,0:24:5.74:128,6,0	1/1:14,1:15:3.82:62,4,0	0/0:18,0:17:23.91:0,24,302	0/0:23,0:23:32.02:0,32,379	0/1:29,0:29:14.45:63,0,14	0/0:34,0:33:74.70:0,75,833	0/1:20,0:18:80.38:95,0,80	1/1:9,0:9:2.23:11,2,0	1/1:60,0:58:12.11:186,12,0	0/1:9,2:10:12.29:78,0,12	1/1:15,4:18:8.88:99,9,0	0/1:32,2:33:36.36:190,0,36	0/0:20,0:19:7.95:0,8,136	0/1:6,0:17:29.72:57,0,30	0/1:8,0:8:4.54:57,0,5	0/1:7,0:6:13.89:78,0,14
chr10	94604879	.	CGT	C	254.98	PASS	AB=0.966;AC=18;AF=0.346;AN=52;BaseQRankSum=4.957;DP=566;FS=8.238;HRun=0;HaplotypeScore=176.1780;InbreedingCoeff=0.3139;MQ=45.24;MQ0=7;MQRankSum=-3.718;QD=1.09;ReadPosRankSum=3.814;VQSLOD=2.1017;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:4.49:22,4,0	0/0:11,0:11:15.02:0,15,202	./.	./.	0/1:17,1:18:9.46:9,0,244	1/1:13,0:13:2.50:15,2,0	0/0:27,0:26:25.79:0,26,265	0/0:20,0:19:26.24:0,26,152	0/0:29,0:28:13.84:0,14,181	1/1:22,0:22:11.18:72,11,0	1/1:18,0:18:11.90:83,12,0	0/0:17,0:17:5.84:0,6,32	0/1:23,0:23:19.18:19,0,35	0/0:15,0:15:6.43:0,6,51	0/1:15,2:16:12.95:13,0,229	0/1:21,1:22:9.24:9,0,234	1/1:28,0:28:18.91:138,19,0	0/0:33,1:33:9.76:0,10,548	0/1:21,0:19:5.46:5,0,103	1/1:11,0:11:2.89:17,3,0	0/0:62,0:59:22.33:0,22,204	0/1:13,0:12:14.67:15,0,56	0/0:19,0:18:9.42:0,9,73	0/0:33,0:32:8.18:0,8,174	0/0:18,0:17:17.13:0,17,205	0/0:21,0:21:22.90:0,23,161	0/0:9,0:9:3.70:0,4,80	0/0:6,0:5:2.91:0,3,17
chr10	94605794	.	A	ATCTC	5692.58	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=4.391;DP=435;FS=6.855;HRun=0;HaplotypeScore=95.5396;InbreedingCoeff=0.7153;MQ=75.92;MQ0=1;MQRankSum=-9.190;QD=23.92;ReadPosRankSum=3.491;VQSLOD=4.0359;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:61.45:1314,61,0	1/1:3,0:3:2.92:17,3,0	0/0:21,0:20:36.10:0,36,628	0/0:13,0:15:35.11:0,35,466	0/0:21,0:21:41.96:0,42,444	1/1:10,1:11:24.08:523,24,0	1/1:20,0:20:24.08:448,24,0	1/1:25,0:24:66.22:1073,66,0	0/1:13,0:13:7.91:8,0,214	0/0:22,0:22:52.37:0,52,953	0/0:18,0:18:48.12:0,48,768	1/1:16,0:16:9.03:158,9,0	1/1:14,1:15:15.05:314,15,0	1/1:15,2:17:27.09:586,27,0	0/1:15,0:15:13.94:14,0,107	0/1:13,0:13:11.61:12,0,221	1/1:10,0:10:15.05:282,15,0	0/0:9,0:8:6.02:0,6,91	0/0:10,0:10:26.99:0,27,284	0/0:16,0:16:38.93:0,39,460	0/0:22,0:22:53.78:0,54,629	1/1:11,0:11:6.02:69,6,0	1/1:13,0:13:6.02:73,6,0	1/1:10,0:10:15.05:299,15,0	0/0:9,0:9:10.69:0,11,138	0/0:14,0:14:33.01:0,33,401	0/0:19,0:19:33.01:0,33,393	1/1:15,0:15:33.11:504,33,0
chr10	94605797	.	T	TCTCTC	6567.97	PASS	AB=0.909;AC=30;AF=0.536;AN=56;BaseQRankSum=1.159;DP=467;FS=11.540;HRun=0;HaplotypeScore=125.5129;InbreedingCoeff=0.6227;MQ=77.73;MQ0=1;MQRankSum=-9.288;QD=24.97;ReadPosRankSum=4.344;VQSLOD=4.0793;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:58.91:1449,59,0	1/1:1,0:3:2.92:17,3,0	0/0:23,0:23:45.96:0,46,746	0/0:19,0:19:28.48:0,28,537	0/0:11,0:22:44.66:0,45,465	1/1:2,8:12:23.94:696,24,0	1/1:1,15:19:24.08:657,24,0	1/1:26,0:26:72.23:1101,72,0	0/1:15,0:15:19.32:19,0,209	0/0:21,0:23:52.36:0,52,1108	0/0:17,0:18:51.10:0,51,903	1/1:1,10:15:9.03:254,9,0	1/1:3,10:17:15.05:361,15,0	1/1:4,10:17:27.09:724,27,0	0/1:18,0:18:12.55:13,0,100	0/1:14,0:14:27.81:28,0,214	1/1:12,0:12:15.05:345,15,0	0/1:6,0:13:21.22:21,0,82	0/0:5,0:10:26.99:0,27,283	0/0:12,0:18:38.92:0,39,470	0/0:16,0:22:53.78:0,54,629	1/1:10,0:10:6.02:69,6,0	1/1:14,0:14:6.02:73,6,0	1/1:2,8:11:12.04:312,12,0	0/0:6,0:9:11.36:0,11,140	0/0:5,0:15:3.72:0,4,378	0/0:8,0:23:36.02:0,36,431	1/1:16,0:16:33.10:428,33,0
chr10	94605798	.	C	CTCTC	5541.33	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=3.799;DP=466;FS=11.924;HRun=0;HaplotypeScore=123.5528;InbreedingCoeff=0.6586;MQ=77.62;MQ0=1;MQRankSum=-9.965;QD=21.48;ReadPosRankSum=5.250;VQSLOD=3.3740;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:28:52.42:1116,52,0	1/1:3,0:3:2.92:17,3,0	0/0:24,0:22:36.10:0,36,628	0/0:20,0:20:35.10:0,35,466	0/0:22,0:22:44.97:0,45,476	1/1:11,0:11:24.08:523,24,0	1/1:18,0:18:24.08:448,24,0	1/1:4,0:29:72.24:1149,72,0	0/1:15,0:15:22.01:22,0,212	0/0:24,0:24:52.34:0,52,953	0/0:18,0:18:48.12:0,48,768	1/1:13,0:13:9.03:158,9,0	1/1:16,0:16:15.05:314,15,0	1/1:14,0:15:27.09:586,27,0	0/1:17,0:17:24.21:24,0,104	0/1:14,0:14:4.34:4,0,221	1/1:2,1:13:15.05:282,15,0	0/1:14,0:13:29.82:30,0,77	0/0:10,0:10:26.99:0,27,284	0/0:18,0:18:35.93:0,36,435	0/0:23,0:23:53.78:0,54,629	1/1:3,0:10:6.02:69,6,0	1/1:4,0:14:6.02:73,6,0	1/1:10,0:11:12.04:222,12,0	0/0:9,0:9:10.69:0,11,138	0/0:15,0:15:32.78:0,33,400	0/0:25,0:25:36.01:0,36,421	1/1:0,0:16:33.11:504,33,0
chr10	94605799	.	C	CCT	1778.90	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=10.898;DP=465;FS=4.689;HRun=0;HaplotypeScore=118.8929;InbreedingCoeff=0.4600;MQ=78.46;MQ0=1;MQRankSum=-9.601;QD=6.66;ReadPosRankSum=5.836;VQSLOD=2.9574;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,6:33:60.51:687,61,0	1/1:3,0:3:2.90:16,3,0	0/0:24,0:22:55.54:0,56,610	0/0:20,0:20:31.75:0,32,356	0/0:21,0:21:9.71:0,10,142	1/1:11,0:11:21.68:105,22,0	1/1:17,0:17:19.27:111,19,0	1/1:28,0:28:10.84:382,11,0	0/1:16,0:16:4.77:5,0,99	0/0:24,0:24:59.66:0,60,790	0/0:17,0:17:44.66:0,45,576	1/1:11,0:11:8.64:46,9,0	0/1:16,0:16:29.98:52,0,30	1/1:15,0:15:23.67:125,24,0	0/1:17,0:17:60.98:78,0,61	0/1:16,0:16:9.57:10,0,89	1/1:12,0:12:14.36:80,14,0	0/1:14,0:13:30.86:41,0,31	0/0:11,0:11:21.98:0,22,125	0/0:18,0:18:13.39:0,13,204	0/0:23,0:23:50.74:0,51,330	1/1:9,0:9:5.82:33,6,0	1/1:15,0:15:5.80:37,6,0	0/1:11,0:11:12.39:35,0,12	0/1:9,0:9:5.25:5,0,57	0/0:15,0:15:13.49:0,13,199	0/0:25,0:25:37.95:0,38,257	1/1:13,0:13:28.98:132,29,0
chr10	94605807	.	CT	C	407.83	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=6.838;DP=450;FS=9.799;HRun=3;HaplotypeScore=87.2992;InbreedingCoeff=0.7883;MQ=81.65;MQ0=1;MQRankSum=-5.308;QD=8.50;ReadPosRankSum=2.286;VQSLOD=0.2761;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,17:30:65.74:418,66,0	0/1:5,0:5:3.98:4,0,50	0/0:24,0:22:24.58:0,25,348	0/0:20,0:20:24.18:0,24,256	0/0:11,0:11:17.84:0,18,126	0/0:18,0:18:45.79:0,46,394	0/0:15,0:15:35.37:0,35,321	0/0:22,0:21:54.05:0,54,531	0/0:13,0:13:9.80:0,10,164	0/0:27,0:27:72.09:0,72,815	0/0:17,0:17:41.44:0,41,459	0/0:9,0:9:20.74:0,21,158	0/0:19,0:19:36.93:0,37,334	0/0:16,0:16:44.74:0,45,369	0/0:18,0:18:17.71:0,18,325	0/0:16,0:16:15.31:0,15,287	1/1:12,1:13:20.23:109,20,0	0/0:13,0:12:24.04:0,24,258	0/0:13,0:13:38.94:0,39,326	0/0:14,0:14:34.14:0,34,250	0/0:23,0:23:62.86:0,63,516	0/0:9,0:9:14.97:0,15,125	0/0:8,0:8:20:0,20,154	0/0:13,0:13:32.99:0,33,313	0/0:10,0:10:20.10:0,20,184	0/0:18,0:18:50.68:0,51,432	0/0:23,0:23:38.43:0,38,330	0/0:13,0:13:29.90:0,30,292
chr10	94607040	.	TA	T	215.08	PASS	AB=0.853;AC=6;AF=0.111;AN=54;BaseQRankSum=3.987;DP=342;FS=0.000;HRun=12;HaplotypeScore=42.0420;InbreedingCoeff=0.4700;MQ=55.51;MQ0=9;MQRankSum=1.054;QD=4.78;ReadPosRankSum=-0.581;VQSLOD=0.3005;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,1:20:2.52:3,0,365	0/0:5,0:5:12.02:0,12,122	0/0:4,0:4:9.02:0,9,89	./.	0/0:15,0:16:33:0,33,322	0/0:19,0:20:43.58:0,44,461	0/0:3,0:3:2.84:0,3,14	0/0:26,0:23:59.94:0,60,582	0/0:14,0:14:21:0,21,203	1/1:1,4:5:8.95:67,9,0	1/1:2,12:14:33.03:252,33,0	0/0:6,0:6:18.02:0,18,176	0/0:10,0:10:25.77:0,26,224	0/0:5,0:5:12.02:0,12,122	0/0:12,0:12:27.04:0,27,269	0/0:4,0:4:11.96:0,12,109	0/0:32,2:33:19.54:0,20,526	0/0:18,0:17:41.65:0,42,380	0/0:27,0:23:37.98:0,38,440	0/0:9,0:9:24.05:0,24,244	0/0:2,0:2:3.01:0,3,30	0/0:3,0:3:6:0,6,56	0/0:1,0:1:3.01:0,3,30	0/1:2,1:3:14.21:14,0,52	0/0:14,0:14:33.05:0,33,324	0/0:23,0:23:60.11:0,60,601	0/0:16,1:18:27.59:0,28,426	0/0:15,1:16:20.86:0,21,350
chr10	94611782	.	TTGTGCGTGTGTG	T	610.62	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=2.851;DP=620;FS=0.954;HRun=0;HaplotypeScore=205.5664;InbreedingCoeff=0.2123;MQ=68.52;MQ0=9;MQRankSum=-2.600;QD=7.36;ReadPosRankSum=0.011;VQSLOD=2.6535;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:99:173,0,464	0/0:10,0:10:18.02:0,18,746	0/0:33,0:21:58.93:0,59,522	0/0:38,0:26:67.59:0,68,673	0/0:22,0:22:31.79:0,32,1110	0/0:19,0:18:32.46:0,32,311	0/0:25,0:25:37.70:0,38,693	0/0:39,0:39:99:0,101,819	0/0:18,0:18:39.91:0,40,795	0/0:29,0:28:68.02:0,68,1101	0/0:14,0:14:20.76:0,21,449	0/1:33,0:33:18.13:18,0,954	0/0:18,0:18:28.89:0,29,364	0/0:12,0:13:26.46:0,26,285	0/0:26,0:25:59.88:0,60,1639	0/0:21,0:21:29.88:0,30,1006	1/1:1,24:26:0.24:519,0,0	0/0:28,0:28:74.86:0,75,1555	0/0:13,0:13:35.86:0,36,605	0/0:19,0:18:40.65:0,41,956	0/0:22,0:21:34.95:0,35,586	0/0:11,0:11:12.42:0,12,147	0/0:21,0:21:38.81:0,39,345	0/0:20,0:20:29.85:0,30,301	0/0:33,0:33:68.95:0,69,1862	0/0:25,0:24:68.82:0,69,1342	0/0:15,0:16:11.35:0,11,579	0/0:4,0:3:5.96:0,6,44
chr10	94611787	.	CGTGTGT	C	843.90	PASS	AB=0.750;AC=13;AF=0.260;AN=50;BaseQRankSum=2.301;DP=637;FS=12.662;HRun=0;HaplotypeScore=144.3315;InbreedingCoeff=0.7508;MQ=65.71;MQ0=13;MQRankSum=-5.099;QD=5.41;ReadPosRankSum=1.424;VQSLOD=2.0648;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:30.52:0,31,473	0/0:8,0:9:12.51:0,13,351	./.	./.	0/0:16,0:16:21.03:0,21,509	1/1:14,5:19:6.78:154,7,0	1/1:20,1:27:15.28:129,15,0	0/0:37,0:37:0:0,0,0	0/0:13,0:18:9.47:0,9,148	0/0:30,0:29:34.53:0,35,419	0/0:12,0:12:9.03:0,9,157	1/1:17,15:33:21.07:381,21,0	1/1:9,8:17:2.75:44,3,0	1/1:10,1:12:6.02:80,6,0	0/0:17,0:23:24.07:0,24,612	0/0:13,0:18:12.04:0,12,360	1/1:26,0:26:15.05:209,15,0	0/0:24,0:26:33.04:0,33,689	0/0:16,0:15:12.04:0,12,254	0/0:22,0:21:18.06:0,18,387	0/0:26,0:25:9:0,9,155	0/0:8,3:11:0:0,0,0	0/1:14,6:21:0:0,0,0	0/0:12,9:21:0:0,0,0	0/0:26,0:34:27.07:0,27,566	0/0:32,0:31:36.08:0,36,655	0/0:6,0:21:17.05:0,17,337	./.
chr10	94611789	.	T	TGC	1858.54	PASS	AB=0.983;AC=13;AF=0.232;AN=56;BaseQRankSum=-0.242;DP=648;FS=17.473;HRun=0;HaplotypeScore=123.8850;InbreedingCoeff=0.5020;MQ=61.22;MQ0=17;MQRankSum=0.432;QD=9.02;ReadPosRankSum=1.991;VQSLOD=2.0304;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:32:43:0,43,455	0/1:11,0:10:17.27:17,0,60	0/0:30,0:18:33.27:0,33,488	0/0:34,0:22:45.54:0,46,523	0/0:16,0:16:37.11:0,37,296	0/0:21,0:20:11.08:0,11,220	0/0:27,0:27:40.67:0,41,355	0/0:35,0:35:91.43:0,91,865	0/0:18,0:18:19.22:0,19,254	1/1:5,26:32:49.15:550,49,0	1/1:14,0:14:17.52:139,18,0	0/0:32,0:32:62.35:0,62,472	0/0:17,0:17:4.67:0,5,168	0/0:11,0:11:20.85:0,21,154	0/1:24,0:23:0.49:0,0,371	0/0:20,0:20:10.80:0,11,239	0/0:27,0:27:17.10:0,17,93	0/0:28,0:27:46.77:0,47,438	0/1:18,0:17:24.49:193,0,24	1/1:22,2:23:16.56:325,17,0	1/1:27,0:26:16.87:258,17,0	0/0:11,0:11:11.95:0,12,94	0/0:20,0:20:20.60:0,21,221	0/0:22,0:21:26.18:0,26,204	0/0:34,0:34:27.70:0,28,514	0/1:33,0:32:69.18:416,0,69	0/1:20,2:21:5.72:130,0,6	0/0:4,0:3:5.96:0,6,44
chr10	94612037	.	TGTGTGTGTGTGGGGGG	T	6315.43	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=9.319;DP=811;FS=1.841;HRun=0;HaplotypeScore=366.9572;InbreedingCoeff=0.8362;MQ=56.13;MQ0=28;MQRankSum=-10.249;QD=19.99;ReadPosRankSum=1.571;VQSLOD=2.6317;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:43.64:0,44,2105	0/1:6,0:6:11.76:12,0,292	0/0:49,0:23:48.14:0,48,2070	0/1:50,0:28:11.13:11,0,1093	0/0:25,0:25:62.46:0,62,2944	1/1:17,1:18:24.08:608,24,0	1/1:25,1:26:24.01:552,24,0	1/1:37,0:36:19.17:465,19,0	0/0:26,0:26:53.88:0,54,2186	0/0:34,0:32:84.20:0,84,3893	0/0:18,0:17:19.57:0,20,1447	1/1:31,1:31:45.15:1133,45,0	1/1:34,0:34:44.34:1081,44,0	1/1:31,2:32:43.39:1151,43,0	0/0:30,0:30:73.77:0,74,3577	0/0:32,0:32:85.17:0,85,4328	0/0:26,0:26:18.98:0,19,1096	0/0:24,0:23:50.76:0,51,2327	0/0:24,0:19:39.56:0,40,1352	0/0:15,0:15:32.82:0,33,1720	0/0:76,0:75:99:0,163,8495	1/1:19,0:19:18.06:429,18,0	1/1:23,1:24:18.06:430,18,0	1/1:32,0:30:8.60:222,9,0	0/0:17,0:17:37.47:0,37,1520	0/0:24,0:21:57.18:0,57,2839	0/0:22,0:21:51.16:0,51,2472	1/1:4,0:4:9.03:221,9,0
chr10	94612039	.	TGTGTGTGTGGGGGG	T	10620.23	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=-6.336;DP=815;FS=2.153;HRun=0;HaplotypeScore=326.6734;InbreedingCoeff=0.4874;MQ=56.65;MQ0=28;MQRankSum=-8.889;QD=21.59;ReadPosRankSum=-1.182;VQSLOD=2.7541;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:56,0:56:99:195,0,1195	0/1:6,0:6:23.79:24,0,228	0/0:49,0:23:39.15:0,39,1818	0/1:51,0:28:3.09:3,0,1008	0/0:26,0:26:17.47:0,17,2260	1/1:3,15:18:24.08:908,24,0	1/1:8,17:25:24.03:805,24,0	1/1:15,21:35:63.18:1226,63,0	0/0:26,0:26:5.54:0,6,1697	0/1:34,0:32:1.16:1,0,2877	0/1:18,0:17:48.77:49,0,1066	1/1:12,19:30:44.15:1768,44,0	1/1:7,28:35:44.44:1801,44,0	1/1:8,25:32:43.39:1652,43,0	0/0:29,0:29:57.56:0,58,2842	0/0:32,0:32:66.55:0,67,3498	0/1:25,0:25:0.68:1,0,632	0/1:24,0:23:10.32:10,0,1853	0/0:24,0:19:17.68:0,18,995	0/0:14,0:14:32.79:0,33,1356	0/0:77,0:76:56.55:0,57,6708	1/1:3,16:19:18.06:717,18,0	1/1:6,19:25:17.78:718,18,0	1/1:11,22:32:8.68:366,9,0	0/1:18,0:18:11.70:12,0,1171	0/0:25,0:22:19.27:0,19,2294	0/0:21,0:20:34.15:0,34,1982	1/1:0,4:4:9.03:366,9,0
chr10	94612047	.	TGGGGGG	T	6407.15	PASS	AB=0.988;AC=38;AF=0.679;AN=56;BaseQRankSum=3.836;DP=791;FS=8.913;HRun=7;HaplotypeScore=245.6135;InbreedingCoeff=-0.1557;MQ=54.05;MQ0=29;MQRankSum=-3.991;QD=8.90;ReadPosRankSum=-2.714;VQSLOD=-0.6138;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:48,2:51:88.33:838,88,0	0/1:6,0:6:29.68:30,0,94	0/0:49,0:25:50.57:0,51,1523	0/1:46,1:25:9.03:9,0,1112	0/1:30,0:30:19.17:19,0,840	1/1:18,0:18:24.08:372,24,0	1/1:21,1:22:24.08:369,24,0	1/1:29,0:28:51.50:630,51,0	0/1:27,0:27:99:129,0,483	0/1:34,0:33:99:143,0,813	0/1:20,0:19:99:151,0,360	1/1:28,0:27:47.02:693,47,0	1/1:33,1:34:45.45:678,45,0	1/1:31,0:29:42.14:627,42,0	0/1:27,0:27:20.99:21,0,894	0/1:33,0:33:99:115,0,1034	1/1:26,0:26:13.66:223,14,0	0/1:24,0:23:99:107,0,562	0/1:24,0:20:99:108,0,275	0/1:13,0:14:51.51:52,0,410	0/1:75,1:75:99:151,0,2151	1/1:18,0:18:18.06:273,18,0	1/1:22,0:22:17.96:275,18,0	1/1:28,0:26:9.03:134,9,0	0/1:18,0:18:99:101,0,343	0/1:27,0:24:27.58:28,0,710	0/0:20,0:20:10.14:0,10,666	1/1:4,0:4:9.03:134,9,0
chr10	94612720	.	TG	T	5434.08	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.986;DP=542;FS=4.993;HRun=1;HaplotypeScore=48.8575;InbreedingCoeff=0.9948;MQ=86.58;MQ0=0;MQRankSum=-3.633;QD=39.09;ReadPosRankSum=-0.045;VQSLOD=5.0446;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.29:0,84,1342	0/0:5,0:5:15.05:0,15,240	0/0:15,0:15:39.99:0,40,571	0/0:20,0:20:53.33:0,53,787	0/0:29,0:29:87.28:0,87,1367	0/0:28,0:28:84.27:0,84,1314	0/0:18,0:18:54.17:0,54,839	0/0:27,0:27:81.26:0,81,1255	0/0:17,0:17:51.17:0,51,815	1/1:0,13:13:39.13:545,39,0	1/1:0,13:13:36.12:503,36,0	0/0:13,0:13:39.12:0,39,599	0/0:30,0:30:90.26:0,90,1388	0/0:15,0:15:45.15:0,45,719	0/0:14,0:14:42.13:0,42,648	0/0:19,0:19:57.19:0,57,909	0/0:31,0:31:90.31:0,90,1438	0/0:14,0:14:42.14:0,42,671	1/1:0,22:22:66.17:883,66,0	1/1:0,27:27:78.23:1070,78,0	1/1:0,14:14:36.12:503,36,0	0/0:6,0:6:18.05:0,18,261	0/0:7,0:7:21.05:0,21,312	0/0:27,0:27:81.24:0,81,1247	0/0:20,0:20:60.20:0,60,959	1/1:0,18:18:54.18:755,54,0	1/1:0,32:32:84.28:1174,84,0	0/0:19,0:19:51.17:0,51,815
chr10	94613742	.	GT	G	660.22	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.219;DP=639;FS=3.181;HRun=1;HaplotypeScore=58.2673;InbreedingCoeff=0.9897;MQ=69.93;MQ0=0;MQRankSum=-2.416;QD=36.68;ReadPosRankSum=1.381;VQSLOD=3.9240;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,2105	0/0:13,0:13:39.13:0,39,619	0/0:27,0:26:75.26:0,75,1191	0/0:34,0:34:99:0,102,1517	0/0:30,0:30:90.31:0,90,1426	0/0:14,0:14:42.14:0,42,661	0/0:13,0:13:39.09:0,39,539	0/0:34,0:34:99:0,99,1564	0/0:23,0:23:69.24:0,69,1096	0/0:23,0:23:69.23:0,69,1083	0/0:18,0:18:54.18:0,54,863	0/0:26,0:26:78.26:0,78,1217	0/0:32,0:32:96.32:0,96,1510	0/0:20,0:20:60.18:0,60,907	0/0:28,0:28:81.26:0,81,1272	0/0:29,0:29:87.28:0,87,1365	1/1:0,18:18:54.18:755,54,0	0/0:8,0:8:18.03:0,18,261	0/0:12,0:12:36.12:0,36,576	0/0:18,0:18:54.17:0,54,837	0/0:35,0:35:99:0,105,1646	0/0:14,0:14:42.14:0,42,669	0/0:17,0:17:51.14:0,51,761	0/0:25,0:25:72.20:0,72,1119	0/0:19,0:19:57.18:0,57,878	0/0:19,0:19:57.19:0,57,888	0/0:37,0:37:99:0,108,1680	0/0:8,0:8:24.04:0,24,334
chr10	94614273	.	C	CTT	3634.72	PASS	AB=0.836;AC=44;AF=0.786;AN=56;BaseQRankSum=-1.491;DP=493;FS=0.000;HRun=16;HaplotypeScore=92.8118;InbreedingCoeff=0.1487;MQ=74.80;MQ0=0;MQRankSum=-2.492;QD=7.92;ReadPosRankSum=-2.841;VQSLOD=0.2145;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:47.84:395,48,0	0/1:8,0:8:5.04:115,0,5	0/0:25,0:19:4.59:0,5,100	0/0:8,0:9:8.14:0,8,46	1/1:14,8:28:27.49:188,27,0	1/1:21,0:21:34.58:280,35,0	0/1:15,0:14:2.50:28,0,3	1/1:32,0:33:23.81:192,24,0	1/1:4,1:22:13.12:89,13,0	0/1:11,0:21:13.87:78,0,14	1/1:12,0:22:19.21:102,19,0	1/1:20,0:20:30.22:233,30,0	1/1:11,0:11:5.97:48,6,0	1/1:7,0:7:6.48:56,6,0	1/1:24,1:26:53.22:475,53,0	0/1:8,8:21:2.63:139,0,3	1/1:3,15:22:13.21:114,13,0	1/1:3,6:9:3.01:37,3,0	0/1:13,0:18:52.86:68,0,53	0/1:15,0:15:4.97:83,0,5	0/1:3,0:11:3.22:3,0,15	1/1:12,0:12:14.09:103,14,0	1/1:16,0:16:9.82:50,10,0	1/1:8,0:8:1.25:3,1,0	1/1:17,0:17:38.28:345,38,0	1/1:6,0:19:21.82:196,22,0	0/1:19,0:20:24.63:156,0,25	1/1:8,0:8:6.01:60,6,0
chr10	94614289	.	T	TA	794.90	PASS	AB=0.636;AC=17;AF=0.315;AN=54;BaseQRankSum=-0.622;DP=463;FS=5.776;HRun=2;HaplotypeScore=63.8519;InbreedingCoeff=0.7271;MQ=72.17;MQ0=0;MQRankSum=1.132;QD=6.31;ReadPosRankSum=0.339;VQSLOD=0.6397;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:37.05:0,37,191	0/0:9,0:9:19.51:0,20,136	0/0:25,0:15:37.43:0,37,290	0/0:9,0:8:12.72:0,13,107	0/0:25,0:25:55.06:0,55,368	0/1:9,12:21:4.84:49,0,5	1/1:1,2:12:5.88:51,6,0	1/1:1,2:26:65.44:502,65,0	0/0:22,0:22:9.46:0,9,75	0/0:25,0:25:62.37:0,62,524	0/0:23,0:23:38.97:0,39,288	1/1:4,8:12:1.58:65,2,0	1/1:2,0:14:5.86:35,6,0	1/1:2,12:14:2.32:24,2,0	0/0:23,0:23:23.19:0,23,126	0/0:17,0:17:16.97:0,17,123	0/0:22,0:22:23.73:0,24,162	0/0:4,0:4:2.50:0,2,9	0/0:18,0:17:40.64:0,41,319	0/0:16,0:16:25.21:0,25,210	0/0:11,0:11:6.31:0,6,89	1/1:6,1:7:12.90:140,13,0	1/1:0,9:12:5.94:64,6,0	./.	0/0:16,0:16:23.99:0,24,124	0/0:19,0:19:40.13:0,40,323	0/0:23,0:23:41.52:0,42,347	1/1:0,0:8:5.91:38,6,0
chr10	94615138	.	GT	G	1822.96	PASS	AB=0.683;AC=21;AF=0.375;AN=56;BaseQRankSum=-2.806;DP=624;FS=7.915;HRun=14;HaplotypeScore=91.7393;InbreedingCoeff=0.6114;MQ=73.62;MQ0=4;MQRankSum=-2.747;QD=7.44;ReadPosRankSum=3.926;VQSLOD=2.6358;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,1:26:11.94:80,12,0	0/0:4,0:8:14.52:0,15,95	0/0:32,0:18:23.69:0,24,178	0/1:26,0:15:5.91:6,0,44	0/0:7,0:34:52.64:0,53,267	0/1:7,13:21:40.73:174,0,41	1/1:4,7:11:14.86:102,15,0	0/1:10,18:29:67.02:267,0,67	0/0:9,0:15:29.36:0,29,153	0/0:5,0:29:64.69:0,65,373	0/0:6,0:29:77.96:0,78,438	1/1:11,8:19:29.01:192,29,0	1/1:6,6:12:17.72:122,18,0	1/1:3,9:13:19.84:129,20,0	0/0:5,0:27:29.84:0,30,158	0/0:12,0:24:57.67:0,58,342	1/1:3,7:10:17.83:123,18,0	0/0:5,0:17:30.90:0,31,153	0/0:16,1:17:13.95:0,14,250	0/0:20,0:25:30.58:0,31,379	0/0:16,0:17:38.80:0,39,326	0/1:10,14:24:37.25:231,0,37	0/1:6,15:22:50.44:238,0,50	1/1:5,15:20:13.86:239,14,0	0/0:12,0:26:58.90:0,59,341	0/0:28,0:36:79.81:0,80,623	0/0:40,0:41:95.61:0,96,812	1/1:6,5:11:17.77:123,18,0
chr10	94616206	.	TCTGTGCTAAATAGCCAGACC	T	2525.31	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.946;DP=594;FS=16.296;HRun=0;HaplotypeScore=313.5413;InbreedingCoeff=0.9857;MQ=93.01;MQ0=0;MQRankSum=-6.949;QD=78.92;ReadPosRankSum=0.709;VQSLOD=1.9900;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:33.11:1655,33,0	0/0:8,0:8:24.07:0,24,1762	0/0:22,0:22:57.19:0,57,3554	0/0:31,0:31:81.02:0,81,4996	0/0:38,0:38:99:0,108,8303	0/0:31,0:31:90.31:0,90,7132	0/0:10,0:10:30.10:0,30,2311	0/0:40,0:40:99:0,111,8453	0/0:27,0:27:75.26:0,75,6517	0/0:18,0:18:48.16:0,48,3640	0/0:14,0:14:42.14:0,42,3647	0/0:23,0:23:63.22:0,63,5083	0/0:16,0:16:45.15:0,45,3701	0/0:24,0:24:69.24:0,69,6039	0/0:28,0:28:78.24:0,78,5727	0/0:20,0:20:57.20:0,57,4838	1/1:2,13:15:18.06:990,18,0	0/0:12,0:12:36.12:0,36,2693	0/0:21,0:21:63.22:0,63,4333	0/0:22,0:22:63.22:0,63,4995	0/0:28,0:28:81.28:0,81,6518	0/0:9,0:9:27.09:0,27,2553	0/0:14,0:14:42.14:0,42,3934	0/0:17,0:17:48.15:0,48,3323	0/0:26,0:26:75.26:0,75,6197	0/0:31,0:31:84.29:0,84,6843	0/0:26,0:26:75.26:0,75,6169	0/0:6,0:6:15.05:0,15,759
chr10	94619248	.	ATT	A	1842.46	PASS	AB=0.545;AC=23;AF=0.411;AN=56;BaseQRankSum=0.566;DP=378;FS=2.830;HRun=14;HaplotypeScore=73.2464;InbreedingCoeff=0.8322;MQ=68.76;MQ0=2;MQRankSum=-0.546;QD=12.62;ReadPosRankSum=2.127;VQSLOD=2.8124;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,1:16:9.69:0,10,181	0/0:4,0:6:13.32:0,13,95	0/0:25,0:14:19.46:0,19,147	0/0:14,0:10:10.74:0,11,76	0/0:19,0:20:50.99:0,51,648	1/1:5,11:17:19.22:291,19,0	1/1:1,7:8:21.02:194,21,0	0/0:21,0:23:56.02:0,56,636	0/0:15,0:15:42.04:0,42,522	1/1:3,1:11:22.45:120,22,0	1/1:6,0:19:24.58:106,25,0	1/1:1,2:3:8.75:68,9,0	1/1:0,5:5:12.01:111,12,0	1/1:1,4:5:14.61:120,15,0	0/0:8,0:9:23.54:0,24,265	0/0:15,0:15:41.58:0,42,515	1/1:2,17:21:50.79:454,51,0	0/0:19,0:19:47.63:0,48,572	0/0:9,0:10:15.58:0,16,75	0/1:4,2:24:14.36:14,0,129	0/0:1,0:8:10.45:0,10,35	1/1:4,9:13:28.51:248,29,0	1/1:5,10:16:29.97:274,30,0	1/1:0,4:4:6.01:56,6,0	0/0:10,0:10:23.94:0,24,246	0/0:4,1:15:0.29:0,0,61	0/0:5,0:12:13.13:0,13,105	0/0:13,0:13:32.45:0,32,327
chr10	94620758	.	A	ATTTAT	9885.86	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-11.513;DP=517;FS=1.760;HRun=0;HaplotypeScore=92.2295;InbreedingCoeff=0.9980;MQ=86.26;MQ0=0;MQRankSum=-5.241;QD=67.71;ReadPosRankSum=1.783;VQSLOD=5.9481;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.24:0,78,1545	0/0:10,0:10:30.08:0,30,582	0/0:20,0:20:24.67:0,25,888	0/0:19,0:19:48.16:0,48,948	0/0:21,0:21:60.21:0,60,1229	0/0:13,0:13:36.11:0,36,708	0/0:17,0:17:48.16:0,48,995	0/0:42,0:42:99:0,120,2354	0/0:12,0:12:33.11:0,33,684	1/1:6,17:23:60.21:1831,60,0	1/1:2,11:15:33.03:869,33,0	0/0:17,0:17:48.16:0,48,980	0/0:15,0:15:42.13:0,42,832	0/0:21,0:21:48.16:0,48,985	0/0:17,0:17:45.15:0,45,919	0/0:17,0:17:51.16:0,51,1020	0/0:24,0:24:69.24:0,69,1415	0/0:24,0:24:60.16:0,60,1185	1/1:9,13:23:51.16:1441,51,0	1/1:4,12:16:42.14:1237,42,0	1/1:6,11:17:30.10:869,30,0	0/0:10,0:10:27.09:0,27,548	0/0:13,0:13:39.13:0,39,808	0/0:8,0:8:24.08:0,24,481	0/0:9,0:9:21.07:0,21,435	1/1:4,21:27:69.24:1980,69,0	1/1:2,20:24:54.19:1659,54,0	0/0:15,0:15:45.15:0,45,933
chr10	94620912	.	TTTTTG	T	501.21	PASS	AB=0.954;AC=15;AF=0.278;AN=54;BaseQRankSum=4.203;DP=437;FS=19.231;HRun=0;HaplotypeScore=66.4486;InbreedingCoeff=0.0299;MQ=36.67;MQ0=85;MQRankSum=-0.527;QD=2.57;ReadPosRankSum=-1.150;VQSLOD=0.0107;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:26:12.62:44,0,13	0/0:6,0:5:15.05:0,15,310	./.	0/0:20,0:4:2.03:0,2,5	0/0:24,0:23:53.51:0,54,606	0/0:14,0:12:20.60:0,21,215	0/1:10,0:8:23.11:23,0,96	1/1:16,0:12:29.25:193,29,0	0/0:13,0:12:4.09:0,4,173	0/1:25,0:24:77.05:77,0,301	0/0:12,0:10:13.62:0,14,91	0/1:12,0:12:56.19:56,0,125	0/0:9,0:9:0.89:0,1,150	0/1:16,0:14:23.35:23,0,206	0/0:7,0:6:18.02:0,18,349	0/0:20,0:15:32.16:0,32,646	0/1:14,17:20:37.70:69,0,38	0/0:23,0:10:13.74:0,14,236	0/0:21,0:21:47.67:0,48,544	0/1:14,1:14:15.15:15,0,212	0/0:13,0:9:18.42:0,18,200	0/1:4,0:3:10.75:11,0,45	0/1:10,0:6:11.26:11,0,41	1/1:9,0:5:1.12:15,1,0	0/0:16,0:13:33.11:0,33,569	0/0:15,0:11:13.18:0,13,262	0/0:17,0:14:27.88:0,28,309	1/1:14,0:5:2.99:117,3,0
chr10	94621804	.	A	AT	4427.97	PASS	AB=0.941;AC=17;AF=0.304;AN=56;BaseQRankSum=-11.299;DP=677;FS=0.717;HRun=10;HaplotypeScore=73.2609;InbreedingCoeff=0.9275;MQ=79.69;MQ0=0;MQRankSum=0.147;QD=20.31;ReadPosRankSum=2.240;VQSLOD=5.8161;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:57.20:0,57,467	0/0:10,0:10:26.97:0,27,222	0/1:15,0:15:3.26:3,0,101	0/0:24,0:20:12.17:0,12,188	0/0:29,1:30:39.58:0,40,534	1/1:7,19:26:29.57:519,30,0	1/1:6,15:21:26.48:484,26,0	0/0:35,0:35:54.66:0,55,521	0/0:14,0:15:34.95:0,35,270	0/0:30,0:31:76.93:0,77,622	0/0:20,1:21:12.92:0,13,311	1/1:3,20:23:57.14:608,57,0	1/1:6,24:30:56.17:581,56,0	1/1:5,22:28:57.01:590,57,0	0/0:25,2:27:43.05:0,43,557	0/0:23,0:24:67.95:0,68,548	0/0:22,0:22:59.89:0,60,488	0/0:16,0:16:41.94:0,42,345	0/0:30,0:32:46.38:0,46,497	0/0:35,0:35:89.89:0,90,739	0/0:29,0:30:70.91:0,71,572	1/1:4,21:25:29.78:507,30,0	1/1:3,25:28:41.55:647,42,0	1/1:2,19:21:26.48:487,26,0	0/0:26,0:26:59.89:0,60,489	0/0:29,0:29:71.64:0,72,578	0/0:24,0:24:60.39:0,60,494	0/0:4,0:4:11.98:0,12,98
chr10	94622039	.	A	AT	602.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.339;DP=647;FS=2.048;HRun=4;HaplotypeScore=58.7611;InbreedingCoeff=0.9050;MQ=88.53;MQ0=0;MQRankSum=-2.510;QD=27.41;ReadPosRankSum=0.393;VQSLOD=2.6974;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.16:0,69,769	0/0:13,0:13:39.09:0,39,430	0/0:22,0:22:51.11:0,51,555	0/0:24,0:24:57.14:0,57,634	0/0:33,0:33:96.24:0,96,1070	0/0:28,0:28:72.20:0,72,817	0/0:12,0:12:36.09:0,36,398	0/0:26,0:26:78.22:0,78,884	0/0:25,0:25:72.21:0,72,817	0/0:30,0:30:90.26:0,90,1021	0/0:17,0:17:51.10:0,51,564	0/0:20,0:20:60.17:0,60,681	0/0:25,0:25:69.19:0,69,783	0/0:21,0:21:63.16:0,63,705	0/0:32,0:32:84.24:0,84,953	0/0:21,0:21:60.17:0,60,681	1/1:4,18:22:51.17:698,51,0	0/0:14,0:14:36.10:0,36,408	0/0:24,0:24:69.20:0,69,783	0/0:21,0:21:60.14:0,60,662	0/0:25,0:25:75.21:0,75,851	0/0:34,0:34:96.27:0,96,1089	0/0:23,0:23:66.19:0,66,749	0/0:15,0:15:39.11:0,39,442	0/0:26,0:26:78.21:0,78,875	0/0:43,0:43:99:0,120,1361	0/0:23,0:23:69.18:0,69,773	0/0:4,0:4:6.02:0,6,68
chr10	94622159	.	A	AGT	1631.98	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.045;DP=648;FS=0.619;HRun=0;HaplotypeScore=86.6092;InbreedingCoeff=0.9408;MQ=68.42;MQ0=1;MQRankSum=-2.056;QD=41.85;ReadPosRankSum=-4.827;VQSLOD=3.7588;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1455	0/0:7,0:7:21.07:0,21,293	0/0:23,0:19:41.85:0,42,560	0/0:23,0:22:55.13:0,55,709	0/0:43,0:43:99:0,114,1578	0/0:25,0:25:72.22:0,72,990	0/0:18,0:18:48.12:0,48,621	1/1:3,31:36:63.19:1636,63,0	0/0:24,0:24:69.23:0,69,966	0/0:26,0:26:63.21:0,63,882	0/0:15,0:15:39.12:0,39,530	0/0:24,0:24:66.22:0,66,924	0/0:29,0:29:84.23:0,84,1110	0/0:10,0:10:27.08:0,27,362	0/0:29,0:29:84.27:0,84,1159	0/0:25,0:25:72.22:0,72,962	0/0:28,0:28:78.23:0,78,1056	0/0:19,0:19:54.15:0,54,720	0/0:22,0:22:65.21:0,65,826	0/0:29,0:29:81.26:0,81,1118	0/0:13,0:13:39.12:0,39,528	0/0:20,0:20:44.51:0,45,595	0/0:20,0:20:54.16:0,54,723	0/0:22,0:22:57.16:0,57,763	0/0:26,0:26:78.23:0,78,1043	0/0:35,0:35:99:0,99,1347	0/0:19,0:19:51.16:0,51,695	1/1:0,2:2:6.02:108,6,0
chr10	94622825	.	G	GA	1195.64	PASS	AB=0.919;AC=22;AF=0.407;AN=54;BaseQRankSum=-0.656;DP=466;FS=8.414;HRun=13;HaplotypeScore=94.4699;InbreedingCoeff=0.3199;MQ=47.10;MQ0=17;MQRankSum=-2.775;QD=4.73;ReadPosRankSum=-4.532;VQSLOD=0.6378;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:20.21:0,20,238	0/0:9,0:9:11.86:0,12,81	0/1:11,0:3:6.98:8,0,7	./.	0/0:18,0:16:14.27:0,14,93	1/1:8,7:15:0.85:134,1,0	1/1:6,10:15:3.52:157,4,0	1/1:19,12:31:19.77:267,20,0	0/1:11,0:10:2.43:2,0,67	0/0:14,0:14:10.70:0,11,62	0/0:8,0:7:8.84:0,9,60	1/1:9,1:12:10.48:166,10,0	1/1:4,7:10:8.97:76,9,0	1/1:13,1:14:17.08:114,17,0	0/0:11,0:12:13.75:0,14,88	0/0:16,0:18:21.18:0,21,119	0/0:32,0:33:55.01:0,55,328	0/0:14,0:13:15.03:0,15,120	0/0:12,0:13:12.24:0,12,99	0/1:15,1:17:23.76:24,0,49	0/0:7,0:6:2.74:0,3,17	0/1:7,2:9:8.18:61,0,8	0/1:13,7:22:7.11:148,0,7	0/1:17,2:17:18.65:92,0,19	0/1:25,1:26:8.63:9,0,206	0/0:22,1:23:13.04:0,13,214	0/1:23,1:24:24:24,0,86	1/1:8,3:7:11.23:90,11,0
chr10	94622848	.	A	AG	1597.81	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.733;DP=527;FS=17.348;HRun=0;HaplotypeScore=70.5022;InbreedingCoeff=0.8971;MQ=56.86;MQ0=18;MQRankSum=-0.360;QD=28.03;ReadPosRankSum=3.811;VQSLOD=2.5433;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,18:27:62.80:767,63,0	0/0:8,0:8:23.97:0,24,251	0/0:34,0:12:26.20:0,26,243	0/0:30,0:8:16.18:0,16,113	0/0:21,0:19:49.41:0,49,573	0/0:12,0:12:26.62:0,27,239	0/0:15,0:14:27.44:0,27,298	0/0:34,0:32:82.67:0,83,951	0/0:7,0:6:14.96:0,15,150	0/0:21,0:21:60.13:0,60,780	0/0:12,0:11:33.06:0,33,401	0/0:14,0:14:41.82:0,42,440	0/0:9,0:9:15:0,15,148	0/0:14,0:14:28.39:0,28,411	0/0:21,0:21:60.07:0,60,729	0/0:17,0:17:42.03:0,42,514	1/1:5,24:29:71.24:952,71,0	0/0:17,0:16:41.82:0,42,498	0/0:23,0:20:57.09:0,57,708	0/0:18,0:17:35.55:0,36,379	0/0:5,0:4:5.91:0,6,57	0/0:11,0:11:29.95:0,30,326	0/0:23,0:23:68.38:0,68,693	0/0:14,0:13:24.15:0,24,260	0/0:33,0:33:93.12:0,93,1132	0/0:25,0:25:72.21:0,72,926	0/0:27,0:27:72:0,72,902	0/0:5,0:4:8.99:0,9,86
chr10	94622918	.	A	AT	9631.70	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-9.765;DP=542;FS=0.390;HRun=9;HaplotypeScore=57.3630;InbreedingCoeff=0.9938;MQ=66.92;MQ0=0;MQRankSum=-0.002;QD=25.28;ReadPosRankSum=0.152;VQSLOD=5.3127;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,29:34:84.14:900,84,0	0/0:9,0:9:23.99:0,24,208	0/0:12,0:11:23.32:0,23,183	0/0:12,0:10:20.94:0,21,182	0/0:28,0:28:71.97:0,72,625	1/1:0,19:20:60.15:657,60,0	1/1:2,14:17:44.95:475,45,0	1/1:5,24:29:69.12:737,69,0	0/0:9,0:9:26.99:0,27,234	1/1:5,16:21:45.09:486,45,0	1/1:4,13:17:13.05:370,13,0	1/1:3,16:19:25.08:504,25,0	1/1:0,9:9:27.07:299,27,0	1/1:5,12:17:33.08:358,33,0	0/0:22,0:22:62.98:0,63,547	0/0:15,0:15:38.99:0,39,339	1/1:4,0:24:57.32:285,57,0	0/0:22,0:23:62.02:0,62,527	1/1:6,20:26:37.08:617,37,0	1/1:1,16:17:48.13:531,48,0	1/1:1,18:19:48.13:531,48,0	1/1:2,22:24:48.13:531,48,0	1/1:4,16:20:45.12:497,45,0	1/1:1,11:12:33.09:365,33,0	0/0:29,0:30:71:0,71,605	1/1:3,18:22:56.92:579,57,0	1/1:5,20:25:60.16:664,60,0	1/1:0,8:9:23.90:246,24,0
chr10	94624952	.	GGTT	G	1405.91	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.505;DP=589;FS=6.938;HRun=0;HaplotypeScore=96.4738;InbreedingCoeff=0.9955;MQ=73.89;MQ0=1;MQRankSum=-1.846;QD=38.00;ReadPosRankSum=2.988;VQSLOD=4.5892;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,2474	0/0:7,0:7:18.06:0,18,391	0/0:17,0:17:42.66:0,43,788	0/0:13,0:13:34.67:0,35,637	0/0:22,0:22:60.17:0,60,1221	0/0:30,0:30:84.16:0,84,1691	0/0:17,0:17:48.13:0,48,923	0/0:27,0:27:72.23:0,72,1471	0/0:16,0:16:45.14:0,45,929	1/1:0,16:16:48.16:794,48,0	1/1:1,20:21:45.15:734,45,0	0/0:24,0:24:69.21:0,69,1368	0/0:18,0:17:51.18:0,51,1125	0/0:19,0:19:54.17:0,54,1117	0/0:24,0:24:72.19:0,72,1408	0/0:24,0:24:69.21:0,69,1424	0/0:17,0:17:47.99:0,48,1002	0/0:19,0:19:48.16:0,48,1022	0/0:25,0:25:72.21:0,72,1373	0/0:24,0:24:66.21:0,66,1410	0/0:15,0:15:45.10:0,45,849	0/0:18,0:18:51.16:0,51,1059	0/0:21,0:21:63.20:0,63,1287	0/0:14,0:14:42.13:0,42,884	0/0:21,0:21:60.20:0,60,1295	0/0:27,1:28:31.30:0,31,1579	0/0:35,0:35:99:0,105,2210	0/0:15,0:15:39.13:0,39,841
chr10	94625510	.	AG	A	534.15	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.288;DP=590;FS=11.999;HRun=1;HaplotypeScore=52.8905;InbreedingCoeff=0.9824;MQ=81.71;MQ0=0;MQRankSum=-3.276;QD=28.11;ReadPosRankSum=1.749;VQSLOD=2.0761;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:45.15:629,45,0	0/0:11,0:11:33.11:0,33,526	0/0:13,0:12:33.11:0,33,485	0/0:19,0:19:57.19:0,57,892	0/0:25,0:25:72.23:0,72,1127	0/0:35,0:34:99:0,99,1574	0/0:19,0:19:57.17:0,57,885	0/0:43,0:43:99:0,123,1900	0/0:22,0:22:66.19:0,66,1004	0/0:31,0:31:90.31:0,90,1440	0/0:16,0:16:48.16:0,48,767	0/0:15,0:15:45.15:0,45,719	0/0:16,0:16:48.16:0,48,767	0/0:13,0:13:39.13:0,39,610	0/0:23,0:23:69.24:0,69,1103	0/0:21,0:21:63.18:0,63,956	0/0:22,0:22:63.20:0,63,982	0/0:23,0:23:66.22:0,66,1047	0/0:27,0:27:81.28:0,81,1295	0/0:26,0:26:78.27:0,78,1246	0/0:29,0:29:87.28:0,87,1367	0/0:10,0:10:30.10:0,30,480	0/0:14,0:14:42.14:0,42,671	0/0:26,0:26:78.25:0,78,1219	0/0:9,0:9:27.09:0,27,432	0/0:36,0:36:99:0,105,1637	0/0:22,0:22:66.22:0,66,1036	0/0:5,0:5:15.05:0,15,240
chr10	94625667	.	CT	C	840.22	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=3.576;DP=416;FS=3.900;HRun=12;HaplotypeScore=48.4073;InbreedingCoeff=0.6058;MQ=74.45;MQ0=9;MQRankSum=0.181;QD=11.20;ReadPosRankSum=1.375;VQSLOD=2.9550;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,23:28:56.78:441,57,0	0/0:4,0:4:12.02:0,12,122	0/0:20,1:15:11.04:0,11,96	0/0:18,0:10:12.69:0,13,87	0/0:19,0:19:38.97:0,39,370	0/0:5,0:20:45.70:0,46,240	0/0:1,0:2:2.84:0,3,14	0/0:31,0:29:57.07:0,57,568	0/1:9,0:9:2.20:2,0,150	0/0:16,0:15:27.04:0,27,264	0/0:13,0:14:38.89:0,39,372	0/0:3,0:15:22.73:0,23,114	0/0:4,0:10:9.41:0,9,44	0/0:3,0:5:5.68:0,6,29	0/0:10,0:10:27.03:0,27,261	0/0:10,0:10:24.03:0,24,237	1/1:10,27:36:58.75:519,59,0	0/0:24,0:24:69.04:0,69,672	0/0:16,0:16:29.55:0,30,268	0/0:17,0:17:39.01:0,39,371	0/0:3,0:3:6.01:0,6,61	0/0:2,0:5:8.52:0,9,43	0/0:4,0:5:5.82:0,6,36	0/0:0,0:3:8.52:0,9,43	0/0:20,0:20:54.08:0,54,534	0/0:25,0:25:51.09:0,51,512	0/0:17,0:17:45.05:0,45,441	0/0:7,0:6:12.02:0,12,122
chr10	94626492	.	TA	T	9340.20	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.092;DP=745;FS=0.000;HRun=2;HaplotypeScore=127.7988;InbreedingCoeff=0.9993;MQ=89.89;MQ0=0;MQRankSum=-3.641;QD=35.92;ReadPosRankSum=1.333;VQSLOD=4.3758;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,172,2483	0/0:8,0:8:24.08:0,24,360	0/0:29,0:29:81.24:0,81,1137	0/0:32,0:32:95.96:0,96,1270	0/0:17,0:17:48.16:0,48,718	1/1:0,29:29:81.26:1052,81,0	1/1:1,19:20:54.18:701,54,0	1/1:0,41:41:99:1550,123,0	0/0:30,0:30:87.01:0,87,1280	0/0:26,0:26:75.25:0,75,1124	0/0:12,0:12:36.12:0,36,537	1/1:0,30:30:84.27:1091,84,0	1/1:1,36:37:96.31:1246,96,0	1/1:1,37:38:99:1402,108,0	0/0:37,0:37:99:0,111,1662	0/0:35,0:35:99:0,105,1554	0/0:23,0:23:69.23:0,69,1033	0/0:19,0:19:57.15:0,57,811	0/0:20,0:20:60.20:0,60,898	0/0:22,0:22:63.20:0,63,923	0/0:38,0:38:99:0,111,1664	1/1:0,11:11:33.11:429,33,0	1/1:1,11:12:27.09:351,27,0	1/1:0,33:33:90.29:1169,90,0	0/0:20,0:20:60.20:0,60,898	0/0:30,0:30:87.29:0,87,1283	0/0:29,0:28:87.29:0,87,1302	1/1:0,9:9:27.09:350,27,0
chr10	94626746	.	T	TTA	522.22	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.204;DP=287;FS=17.828;HRun=0;HaplotypeScore=38.2767;InbreedingCoeff=0.6170;MQ=80.08;MQ0=3;MQRankSum=-0.167;QD=20.09;ReadPosRankSum=2.867;VQSLOD=1.7556;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:10:3:27,3,0	0/0:2,0:2:6.02:0,6,78	0/0:22,0:10:12.49:0,12,104	0/0:29,0:14:3.61:0,4,24	0/0:13,0:13:32.92:0,33,425	0/0:20,0:20:54.16:0,54,687	0/0:2,0:2:6.02:0,6,78	0/0:33,0:33:69.21:0,69,880	0/0:7,0:7:21.07:0,21,273	0/0:13,0:13:36.11:0,36,446	0/0:6,0:6:15.05:0,15,192	0/0:7,0:7:18.05:0,18,220	0/0:6,0:6:18.05:0,18,219	0/0:5,0:5:15.02:0,15,178	0/0:8,0:8:24.08:0,24,310	0/0:6,0:6:12.04:0,12,156	1/1:2,14:16:36.12:603,36,0	0/0:10,0:10:24.06:0,24,297	0/0:11,0:11:27.09:0,27,351	0/0:6,0:6:12.04:0,12,156	0/0:6,0:6:17.98:0,18,196	0/0:3,0:3:9.02:0,9,102	0/0:2,0:2:6.02:0,6,77	0/0:4,0:4:9.03:0,9,116	0/0:11,0:11:24.08:0,24,312	0/0:7,0:7:18.05:0,18,221	0/0:11,0:11:22.88:0,23,276	0/0:11,0:11:33.10:0,33,418
chr10	94628669	.	GCA	G	3535.62	PASS	AB=0.522;AC=9;AF=0.161;AN=56;BaseQRankSum=9.710;DP=706;FS=25.943;HRun=0;HaplotypeScore=129.4348;InbreedingCoeff=0.8868;MQ=59.06;MQ0=10;MQRankSum=3.242;QD=24.05;ReadPosRankSum=1.986;VQSLOD=2.2129;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,102,1722	0/0:9,0:9:27.08:0,27,431	0/0:43,0:25:57.12:0,57,861	0/0:54,0:32:69.69:0,70,1126	0/0:35,0:35:99:0,102,1668	0/0:13,0:13:21.48:0,21,275	0/0:24,0:24:47.65:0,48,776	0/0:28,0:26:63.21:0,63,1056	0/0:24,0:24:51.17:0,51,849	0/0:27,0:26:75.16:0,75,1130	0/0:12,0:12:17.98:0,18,312	0/0:26,0:26:56.86:0,57,929	0/0:25,0:25:57.19:0,57,961	0/0:13,0:13:32.85:0,33,530	0/0:34,0:34:99:0,99,1676	0/0:15,0:15:42.10:0,42,670	0/0:27,0:27:69.24:0,69,1175	0/0:20,0:20:48.16:0,48,819	1/1:1,20:21:54.09:665,54,0	1/1:2,27:29:54.18:718,54,0	1/1:7,52:58:87.15:1157,87,0	0/0:22,0:22:45.09:0,45,694	0/0:19,0:19:38.87:0,39,618	0/0:36,0:37:43.44:0,43,766	0/0:11,0:11:33.11:0,33,540	0/1:2,22:23:0.96:597,0,1	1/1:0,14:14:30.10:399,30,0	0/0:1,0:1:3.01:0,3,52
chr10	94628695	.	T	TCACACA	2517.29	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=-1.226;DP=792;FS=27.289;HRun=0;HaplotypeScore=215.5181;InbreedingCoeff=0.6977;MQ=54.40;MQ0=22;MQRankSum=-4.100;QD=6.41;ReadPosRankSum=-6.189;VQSLOD=-0.5735;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:33.05:0,33,898	0/0:11,0:11:20.99:0,21,376	0/0:54,0:18:15.05:0,15,262	0/0:62,0:33:31.91:0,32,543	0/0:31,0:33:39.12:0,39,735	1/1:6,6:14:5.24:135,5,0	1/1:18,10:31:12.44:271,12,0	1/1:35,0:33:36.45:395,36,0	0/0:21,0:22:45.14:0,45,832	1/1:34,0:32:11.61:225,12,0	1/1:17,0:17:11.80:113,12,0	1/1:12,11:26:20.85:505,21,0	1/1:13,6:25:20.65:542,21,0	1/1:9,10:21:6.02:194,6,0	0/0:32,0:35:72.24:0,72,1407	0/0:18,0:18:35.85:0,36,703	0/0:30,0:30:66.21:0,66,1252	0/0:20,0:23:42:0,42,750	0/0:17,0:14:20.07:0,20,327	0/1:32,0:32:13.55:14,0,514	0/1:63,0:62:22.60:23,0,657	1/1:12,10:28:2.48:97,2,0	1/1:13,9:25:6.01:73,6,0	1/1:20,10:37:2.61:38,3,0	0/0:15,0:14:15.05:0,15,301	0/0:25,0:24:4.62:0,5,463	0/0:17,0:17:5.14:0,5,410	1/1:5,0:5:9:95,9,0
chr10	94630166	.	GCT	G	7845.88	PASS	AB=0.900;AC=29;AF=0.518;AN=56;BaseQRankSum=11.027;DP=523;FS=4.371;HRun=0;HaplotypeScore=72.2489;InbreedingCoeff=0.9069;MQ=75.89;MQ0=1;MQRankSum=0.613;QD=26.78;ReadPosRankSum=3.041;VQSLOD=5.4556;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,37:48:99:1337,108,0	0/0:4,0:4:12.04:0,12,193	0/0:18,0:16:12.17:0,12,363	0/0:34,0:29:51.35:0,51,834	0/1:16,2:18:29.24:29,0,594	1/1:6,10:16:27.08:335,27,0	1/1:4,17:21:51.16:632,51,0	1/1:10,24:34:72.18:862,72,0	0/0:11,0:11:30.10:0,30,492	1/1:3,13:16:36.11:446,36,0	1/1:4,21:25:60.19:744,60,0	1/1:1,12:13:33.10:409,33,0	1/1:1,11:11:27.08:335,27,0	1/1:3,22:25:60.18:732,60,0	0/0:18,0:18:48.16:0,48,787	0/0:13,0:13:36.12:0,36,591	1/1:4,19:23:60.19:742,60,0	0/0:20,0:20:54.18:0,54,882	0/0:15,0:15:30.10:0,30,489	0/0:13,0:13:27.09:0,27,440	0/0:31,0:31:78.23:0,78,1214	1/1:1,6:7:15.05:186,15,0	1/1:2,9:12:29.92:349,30,0	1/1:1,12:13:36.11:446,36,0	0/0:15,0:15:39.13:0,39,640	0/0:17,1:18:7.94:0,8,652	0/0:20,0:20:54.18:0,54,886	1/1:2,8:10:21.07:260,21,0
chr10	94630242	.	A	AT	2435.70	PASS	AB=0.777;AC=18;AF=0.321;AN=56;BaseQRankSum=-6.845;DP=520;FS=2.530;HRun=13;HaplotypeScore=72.0977;InbreedingCoeff=0.5327;MQ=73.55;MQ0=0;MQRankSum=0.542;QD=11.07;ReadPosRankSum=-2.036;VQSLOD=2.9112;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:36:61.94:0,62,189	0/0:9,0:9:16.87:0,17,109	0/1:24,0:19:9.69:10,0,54	0/1:14,0:11:0.75:1,0,10	0/0:14,0:14:19.88:0,20,142	0/1:9,10:21:27.37:260,0,27	0/1:11,11:22:77.92:156,0,78	1/1:9,21:31:38.62:521,39,0	0/0:12,0:12:29.70:0,30,202	0/0:12,0:12:17.76:0,18,123	0/0:16,0:19:35.77:0,36,221	1/1:7,9:16:36.01:322,36,0	1/1:1,19:20:33.03:303,33,0	0/1:14,13:27:2.12:380,0,2	0/0:22,1:24:18.49:0,18,255	0/0:16,0:17:20.11:0,20,197	0/0:3,0:25:43.67:0,44,136	0/0:18,0:18:38.57:0,39,264	0/0:25,0:29:49.81:0,50,312	0/0:12,0:13:31.71:0,32,211	0/0:10,0:11:28.81:0,29,191	1/1:3,6:9:0.44:147,0,0	1/1:0,8:8:18.02:167,18,0	0/1:7,8:15:28.72:187,0,29	0/0:15,0:15:23.66:0,24,163	0/0:24,0:25:43.59:0,44,292	0/0:19,0:21:45.63:0,46,299	1/1:4,7:11:18.02:167,18,0
chr10	94630406	.	G	GCTCT	1647.74	PASS	AB=0.818;AC=29;AF=0.580;AN=50;BaseQRankSum=-5.275;DP=453;FS=0.949;HRun=0;HaplotypeScore=107.0257;InbreedingCoeff=0.5438;MQ=72.42;MQ0=6;MQRankSum=2.783;QD=8.24;ReadPosRankSum=-1.027;VQSLOD=2.5664;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:22:27.03:0,27,251	./.	1/1:34,0:14:0.47:1,0,0	./.	1/1:8,0:11:5.75:77,6,0	1/1:8,0:9:2.74:12,3,0	1/1:10,5:16:8.77:154,9,0	0/0:32,0:34:1.85:0,2,49	1/1:6,1:7:12.04:257,12,0	0/0:7,0:9:1.55:0,2,4	0/0:8,0:19:5.97:0,6,56	1/1:5,3:9:3.01:71,3,0	1/1:8,2:12:5.58:142,6,0	0/1:14,3:18:38:118,0,38	1/1:12,1:19:14.52:231,15,0	1/1:6,3:10:11.62:236,12,0	1/1:9,2:12:6:95,6,0	1/1:4,3:9:8.77:154,9,0	0/0:19,0:22:9.01:0,9,84	0/0:12,0:16:6.01:0,6,56	./.	1/1:8,0:8:2.72:66,3,0	0/0:15,0:15:0.59:0,1,1	1/1:12,0:14:4.41:12,4,0	1/1:8,1:10:12.01:181,12,0	0/0:15,0:20:8.55:0,9,83	0/0:4,0:9:9.01:0,9,84	0/0:4,0:7:9.01:0,9,84
chr10	94631124	.	A	AT	4186.54	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-7.762;DP=631;FS=2.037;HRun=8;HaplotypeScore=64.8171;InbreedingCoeff=0.9956;MQ=80.19;MQ0=0;MQRankSum=0.243;QD=23.13;ReadPosRankSum=0.387;VQSLOD=4.2186;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:38:65.34:332,65,0	0/0:9,0:9:24:0,24,216	0/0:22,0:22:17.84:0,18,345	0/0:20,0:19:31.11:0,31,275	0/0:28,0:28:71.95:0,72,641	0/0:31,0:32:95.08:0,95,853	0/0:23,0:23:66.02:0,66,599	0/0:29,0:29:65.95:0,66,582	0/0:23,0:23:63.03:0,63,576	0/0:25,0:24:66.02:0,66,601	0/0:19,0:19:48.01:0,48,434	0/0:22,0:22:38.44:0,38,520	0/0:20,0:20:54.03:0,54,494	0/0:25,0:25:68.99:0,69,621	0/0:28,0:28:78.03:0,78,710	0/0:21,0:21:60.01:0,60,540	1/1:1,22:22:26.70:561,27,0	0/0:8,0:8:21:0,21,192	1/1:2,15:17:45.06:466,45,0	1/1:1,16:17:42.08:470,42,0	1/1:3,26:29:63.19:726,63,0	0/0:22,0:22:60.03:0,60,549	0/0:25,0:25:71.99:0,72,648	0/0:18,0:18:51.03:0,51,467	0/0:23,0:23:62.97:0,63,567	1/1:6,21:27:20.17:698,20,0	1/1:1,29:30:81.24:934,81,0	0/0:8,0:8:22.83:0,23,197
chr10	94631985	.	AT	A	2522.84	PASS	AB=0.750;AC=19;AF=0.339;AN=56;BaseQRankSum=11.011;DP=488;FS=3.727;HRun=11;HaplotypeScore=54.0324;InbreedingCoeff=0.7684;MQ=77.16;MQ0=0;MQRankSum=0.226;QD=13.49;ReadPosRankSum=2.831;VQSLOD=3.7553;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:59.92:492,60,0	0/1:2,8:10:7.96:148,0,8	0/1:16,1:16:32.05:32,0,139	0/1:11,1:11:0.66:34,0,1	1/1:3,20:23:53.89:443,54,0	0/0:18,0:18:39.10:0,39,416	0/0:6,0:6:18.03:0,18,185	0/0:38,0:38:81.16:0,81,830	1/1:0,13:13:32.96:271,33,0	0/0:24,1:24:35.49:0,35,576	0/0:24,0:24:51.12:0,51,534	0/0:10,0:10:30.08:0,30,320	0/0:15,0:15:39.09:0,39,409	0/0:16,0:16:39.06:0,39,387	1/1:3,14:17:26.96:222,27,0	1/1:1,14:15:35.96:296,36,0	1/1:1,22:24:58.97:474,59,0	1/1:9,7:16:23.91:193,24,0	0/0:21,0:21:27.82:0,28,454	0/0:21,0:20:42.11:0,42,448	0/0:3,0:3:9.02:0,9,96	0/0:22,1:23:38.51:0,39,615	0/0:17,2:20:1.70:0,2,407	0/0:10,0:9:30.08:0,30,320	1/1:2,8:10:14.98:123,15,0	0/0:15,0:15:36.08:0,36,378	0/0:18,1:19:23.48:0,23,455	0/0:17,0:17:20.76:0,21,406
chr10	94634780	.	GATACATACATAC	G	8709.92	PASS	AB=1.000;AC=35;AF=0.700;AN=50;BaseQRankSum=0.647;DP=584;FS=1.237;HRun=0;HaplotypeScore=248.5433;InbreedingCoeff=0.5761;MQ=64.73;MQ0=4;MQRankSum=-5.028;QD=23.10;ReadPosRankSum=2.448;VQSLOD=3.7253;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:32.41:0,32,914	1/1:6,0:10:3.11:7,3,0	./.	./.	1/1:13,8:21:15.05:489,15,0	1/1:15,0:14:15.05:413,15,0	./.	0/1:45,0:44:11.05:11,0,30	1/1:9,16:26:36.12:1174,36,0	0/0:20,0:20:10.21:0,10,129	0/0:21,0:21:13.37:0,13,136	1/1:16,0:16:24.08:670,24,0	1/1:21,0:21:21.07:586,21,0	1/1:15,0:15:24.08:670,24,0	1/1:9,15:26:36.12:1194,36,0	1/1:11,16:27:27.09:924,27,0	1/1:12,0:12:3.01:94,3,0	1/1:7,5:12:12.04:411,12,0	0/0:21,0:20:13.38:0,13,70	0/1:31,0:31:58.42:58,0,249	0/0:24,0:24:6:0,6,72	1/1:12,0:12:9.03:200,9,0	1/1:14,0:14:18.06:468,18,0	1/1:11,0:11:3.01:84,3,0	1/1:12,17:29:27.09:905,27,0	0/0:29,0:29:34.33:0,34,320	0/1:29,0:29:69.97:70,0,76	1/1:5,0:5:8.52:280,9,0
chr10	94634805	.	ATACATACATACATACATACATACATACC	A	8893.74	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=0.657;DP=508;FS=1.174;HRun=0;HaplotypeScore=353.7959;InbreedingCoeff=0.7176;MQ=47.35;MQ0=9;MQRankSum=-3.757;QD=71.72;ReadPosRankSum=2.735;VQSLOD=3.2743;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:87.59:0,88,5371	0/0:7,0:7:15.03:0,15,662	0/0:9,0:4:6.02:0,6,219	0/0:16,0:7:21.07:0,21,1032	0/0:18,0:18:39.07:0,39,1412	1/1:5,6:10:18.06:1162,18,0	0/1:8,0:8:0:0,0,0	0/0:31,0:27:74.28:0,74,3473	0/0:22,0:22:51.16:0,51,2155	0/0:24,0:23:16.21:0,16,2834	0/0:23,0:23:16.10:0,16,1499	1/1:8,7:15:30.09:1922,30,0	1/1:6,7:13:24.08:1687,24,0	1/1:2,8:10:24.08:1791,24,0	0/0:23,0:23:51.16:0,51,1914	0/0:24,0:24:45.02:0,45,1753	0/0:17,0:17:6.02:0,6,164	0/0:13,0:13:33.08:0,33,1357	0/1:20,0:17:54.36:54,0,1771	0/0:30,0:30:63.20:0,63,3959	0/0:17,0:16:9.92:0,10,499	1/1:3,3:6:12.04:720,12,0	1/1:3,6:9:18.06:1309,18,0	1/1:5,2:7:3.01:224,3,0	0/0:27,0:27:53.94:0,54,2332	0/1:25,0:25:25.74:26,0,3605	0/0:30,0:30:42.62:0,43,2507	0/0:15,0:15:17.12:0,17,1535
chr10	94634821	.	ATACATACATACC	A	11059.91	PASS	AB=0.995;AC=36;AF=0.643;AN=56;BaseQRankSum=8.543;DP=547;FS=6.991;HRun=0;HaplotypeScore=240.3174;InbreedingCoeff=0.0026;MQ=52.84;MQ0=4;MQRankSum=-4.931;QD=22.25;ReadPosRankSum=5.105;VQSLOD=2.3655;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:99:150,0,951	0/0:6,0:6:9.10:0,9,59	0/0:12,0:9:26.80:0,27,238	0/0:13,0:11:26.12:0,26,311	0/1:21,0:21:99:346,0,226	1/1:14,0:13:27.04:552,27,0	1/1:5,0:5:3:26,3,0	1/1:27,0:23:63.05:616,63,0	0/1:23,0:23:90.81:898,0,91	0/1:25,0:24:6.87:349,0,7	0/1:24,0:24:32.57:40,0,33	1/1:17,0:17:33.07:809,33,0	1/1:17,0:17:27.06:690,27,0	1/1:15,0:15:39.06:857,39,0	0/1:22,0:22:77.82:925,0,78	0/1:22,0:22:94.84:715,0,95	1/1:1,18:19:3.01:112,3,0	0/1:18,0:18:99:276,0,255	1/1:19,0:19:36.14:372,36,0	0/1:30,1:31:86.66:230,0,87	0/0:19,0:18:3.48:0,3,32	1/1:15,0:15:30.01:399,30,0	1/1:11,0:11:30.02:611,30,0	1/1:9,0:9:9:142,9,0	0/1:32,0:32:99:670,0,288	0/1:28,0:28:52.76:362,0,53	0/1:32,1:33:5.42:214,0,5	1/1:16,3:19:47.87:699,48,0
chr10	94634825	.	ATACATACC	A	11380.50	PASS	AB=0.996;AC=44;AF=0.786;AN=56;BaseQRankSum=9.095;DP=556;FS=6.224;HRun=0;HaplotypeScore=211.5767;InbreedingCoeff=0.0908;MQ=54.38;MQ0=3;MQRankSum=-3.956;QD=21.47;ReadPosRankSum=4.462;VQSLOD=3.6400;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:30:99:200,0,247	0/1:7,0:7:61.95:97,0,62	0/0:12,0:9:26.80:0,27,238	0/0:14,0:12:28.58:0,29,293	0/1:21,0:21:99:115,0,226	1/1:15,0:14:30.03:438,30,0	1/1:5,0:5:3:26,3,0	1/1:25,0:21:60.45:539,60,0	0/1:25,0:25:99:359,0,142	1/1:2,25:26:71.81:920,72,0	1/1:1,21:22:11.96:268,12,0	1/1:17,0:17:33.07:585,33,0	1/1:18,0:18:30.05:519,30,0	1/1:15,0:15:39.06:633,39,0	0/1:24,0:24:99:399,0,122	0/1:22,0:22:94.85:297,0,95	1/1:18,0:18:3.01:66,3,0	0/1:19,0:19:87.53:88,0,276	1/1:1,20:21:59.96:791,60,0	1/1:3,28:31:48.04:1165,48,0	1/1:2,14:15:2.68:37,3,0	1/1:15,0:15:29.95:321,30,0	1/1:13,0:13:36.01:491,36,0	1/1:10,0:10:12:139,12,0	0/1:34,0:34:99:246,0,334	1/1:1,27:28:80.96:1231,81,0	1/1:2,31:33:35.53:921,36,0	1/1:19,0:19:47.81:490,48,0
chr10	94634829	.	ATACC	A	7307.13	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=9.678;DP=567;FS=10.280;HRun=0;HaplotypeScore=197.4522;InbreedingCoeff=0.4821;MQ=55.56;MQ0=3;MQRankSum=-4.032;QD=14.73;ReadPosRankSum=4.530;VQSLOD=3.6136;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,7:29:47.42:751,47,0	0/1:7,0:7:5.61:6,0,63	0/0:14,0:10:29.80:0,30,267	0/0:17,0:12:28.58:0,29,293	0/0:21,0:21:5.16:0,5,236	1/1:17,0:16:36.02:347,36,0	1/1:9,0:9:14.99:126,15,0	1/1:25,0:22:65.99:593,66,0	0/1:26,0:26:51.99:52,0,183	1/1:26,0:25:71.80:646,72,0	1/1:21,0:21:11.95:130,12,0	1/1:18,0:18:36.06:386,36,0	1/1:18,0:18:30.05:324,30,0	1/1:16,0:16:42.04:434,42,0	0/1:25,0:25:66.66:67,0,151	0/1:23,0:23:47.14:47,0,123	1/1:18,0:18:3.01:38,3,0	0/0:19,0:19:20.89:0,21,300	1/1:20,0:20:59.96:561,60,0	1/1:29,0:29:42.08:511,42,0	1/1:16,0:15:0.46:1,0,0	1/1:15,0:15:29.94:265,30,0	1/1:14,0:14:38.77:349,39,0	1/1:11,0:11:12:111,12,0	0/1:35,0:35:5.06:5,0,370	1/1:27,0:27:77.77:721,78,0	1/1:32,0:32:35.71:434,36,0	1/1:19,0:19:47.80:406,48,0
chr10	94634888	.	TA	T	7446.21	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=10.601;DP=652;FS=8.746;HRun=2;HaplotypeScore=88.3388;InbreedingCoeff=0.9843;MQ=69.81;MQ0=0;MQRankSum=-3.626;QD=34.80;ReadPosRankSum=-0.766;VQSLOD=4.3799;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.25:0,81,1177	0/0:8,0:8:24.08:0,24,360	0/0:13,0:13:8.21:0,8,391	0/0:14,0:13:28.67:0,29,371	0/0:30,0:30:90.29:0,90,1324	1/1:1,21:22:57.19:739,57,0	1/1:1,19:20:45.15:584,45,0	1/1:1,41:42:99:1571,123,0	0/0:22,0:22:63.20:0,63,921	0/0:35,0:35:99:0,102,1485	0/0:24,0:24:63.21:0,63,942	1/1:0,19:19:54.18:700,54,0	1/1:1,18:19:54.18:700,54,0	1/1:0,19:19:57.19:739,57,0	0/0:15,0:15:45.15:0,45,663	0/0:21,0:21:60.16:0,60,855	0/0:30,0:30:48.15:0,48,687	0/0:23,0:23:66.08:0,66,935	0/0:21,0:21:63.21:0,63,927	0/0:29,0:29:81.26:0,81,1190	0/0:9,0:9:12.04:0,12,176	1/1:2,21:23:60.20:778,60,0	1/1:0,23:23:69.22:896,69,0	1/1:0,12:12:21.07:272,21,0	0/0:42,0:42:99:0,123,1843	0/0:35,0:35:99:0,105,1490	0/0:36,0:36:62.84:0,63,902	1/1:1,14:15:36.12:467,36,0
chr10	94636365	.	CGTGTGTGTGTATGTGT	C	1260.93	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=-0.869;DP=570;FS=7.577;HRun=0;HaplotypeScore=202.3461;InbreedingCoeff=0.1544;MQ=65.51;MQ0=12;MQRankSum=1.331;QD=6.89;ReadPosRankSum=-0.630;VQSLOD=1.9569;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,21:26:3.01:38,3,0	0/0:11,0:11:20.68:0,21,570	0/0:24,0:13:16.43:0,16,200	0/0:29,0:21:37.29:0,37,372	0/0:24,0:24:41.45:0,41,1300	./.	0/1:26,0:26:99:257,0,855	1/1:20,0:20:8.64:245,9,0	0/0:18,0:18:33.92:0,34,797	0/0:23,0:22:48.08:0,48,1120	0/0:14,0:14:24.69:0,25,464	0/1:17,0:17:99:159,0,443	0/1:22,0:22:99:214,0,627	0/1:19,0:19:99:110,0,473	0/0:26,0:25:41.99:0,42,1053	0/0:19,0:18:27.01:0,27,541	1/1:5,0:17:3.01:115,3,0	0/0:18,0:18:38.92:0,39,1219	0/0:18,0:18:47.25:0,47,898	0/0:17,0:17:27.22:0,27,559	0/0:42,0:41:77.41:0,77,1912	0/1:16,0:16:99:129,0,552	0/1:13,0:13:67.84:68,0,263	0/0:23,0:23:3.01:0,3,155	0/0:20,0:20:23.56:0,24,637	0/0:25,0:23:60.03:0,60,1427	0/0:14,0:14:33.51:0,34,1047	0/1:6,0:5:77.85:78,0,186
chr10	94636374	.	GTA	G	2789.65	PASS	AB=1.000;AC=24;AF=0.444;AN=54;BaseQRankSum=1.362;DP=594;FS=8.860;HRun=0;HaplotypeScore=83.6198;InbreedingCoeff=0.6272;MQ=59.68;MQ0=17;MQRankSum=2.556;QD=10.11;ReadPosRankSum=-2.551;VQSLOD=1.6046;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:21:2.94:18,3,0	0/0:9,0:9:19.81:0,20,166	0/0:21,0:10:16.43:0,16,200	0/0:25,0:17:37.18:0,37,372	0/0:25,0:25:40.92:0,41,449	./.	1/1:28,2:30:68.88:608,69,0	1/1:2,13:16:19.51:272,20,0	0/0:21,0:21:31.98:0,32,254	0/0:22,0:21:12.45:0,12,322	0/0:11,0:11:24.26:0,24,210	1/1:21,0:21:50.69:394,51,0	1/1:26,0:26:67.87:517,68,0	1/1:25,0:25:47.66:382,48,0	0/0:26,0:25:41.57:0,42,366	0/0:20,0:19:23.84:0,24,185	1/1:15,0:14:2.92:17,3,0	0/0:16,0:17:18.71:0,19,296	0/0:18,0:18:22.58:0,23,366	0/1:17,0:17:13.13:13,0,192	0/0:47,0:45:12.37:0,12,578	1/1:17,0:17:47.91:407,48,0	1/1:15,0:15:23.68:194,24,0	1/1:0,21:21:3.01:45,3,0	0/1:26,0:26:21.35:21,0,122	0/0:29,0:26:5.26:0,5,482	0/1:15,0:15:0.95:1,0,256	0/1:9,0:6:28.04:97,0,28
chr10	94636475	.	G	GA	7702.82	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-14.569;DP=614;FS=0.667;HRun=3;HaplotypeScore=62.3893;InbreedingCoeff=0.9153;MQ=73.70;MQ0=0;MQRankSum=-0.782;QD=35.17;ReadPosRankSum=-1.109;VQSLOD=4.8663;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1366	0/0:10,0:10:30.09:0,30,360	0/1:10,0:10:13.19:13,0,212	0/0:15,0:15:12.37:0,12,306	0/0:17,0:17:51.13:0,51,597	1/1:0,22:22:63.21:882,63,0	1/1:1,21:22:54.16:756,54,0	1/1:4,23:27:69.22:951,69,0	0/0:23,0:23:66.20:0,66,791	0/0:26,0:26:72.22:0,72,864	0/0:27,0:27:81.22:0,81,943	1/1:1,22:23:60.20:840,60,0	1/1:3,13:16:39.13:546,39,0	1/1:0,17:17:42.14:588,42,0	0/0:29,0:29:84.26:0,84,1008	0/0:20,0:20:60.18:0,60,720	0/0:29,0:29:66.18:0,66,778	0/0:7,0:7:13.59:0,14,146	0/0:22,0:22:60.17:0,60,710	0/0:22,0:22:60.17:0,60,707	0/0:45,0:45:99:0,120,1440	1/1:1,24:25:72.24:1008,72,0	1/1:1,25:26:72.24:1008,72,0	1/1:0,26:26:69.18:943,69,0	0/0:24,0:24:69.19:0,69,805	0/0:24,0:24:69.20:0,69,819	0/0:16,0:16:48.12:0,48,550	1/1:0,5:5:12.04:168,12,0
chr10	94636699	.	T	TGAAGAAGAAGAAGAAGAA	1746.67	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.020;DP=720;FS=0.000;HRun=0;HaplotypeScore=324.8076;InbreedingCoeff=0.9973;MQ=77.54;MQ0=1;MQRankSum=-3.856;QD=60.23;ReadPosRankSum=-0.817;VQSLOD=2.1287;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,15:28:24.08:1840,24,0	0/0:14,0:14:42.14:0,42,1868	0/0:24,0:20:33.52:0,34,997	0/0:27,0:25:37.41:0,37,1102	0/0:29,0:29:63.20:0,63,2750	0/0:30,0:30:75.23:0,75,3166	0/0:29,0:29:75.24:0,75,2914	0/0:28,0:28:57.19:0,57,2100	0/0:38,0:38:99:0,99,4055	0/0:35,0:35:90.27:0,90,3681	0/0:17,0:17:42.14:0,42,1905	0/0:37,0:37:90.29:0,90,3818	0/0:30,0:30:69.17:0,69,2449	0/0:31,0:31:75.24:0,75,3469	0/0:26,0:26:66.18:0,66,2416	0/0:32,0:32:81.26:0,81,3529	0/0:22,0:22:50.84:0,51,1846	0/0:16,0:16:39.13:0,39,1710	0/0:18,0:18:39.12:0,39,1472	0/0:19,0:19:51.15:0,51,2023	0/0:32,0:32:81.28:0,81,3644	0/0:27,0:27:57.18:0,57,2393	0/0:18,0:18:51.13:0,51,1857	0/0:25,0:25:47.34:0,47,2685	0/0:19,0:19:48.16:0,48,2157	0/0:32,0:32:90.25:0,90,3706	0/0:24,0:24:69.21:0,69,2459	0/0:12,0:12:36.12:0,36,1571
chr10	94636726	.	A	AGTT	375.77	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=8.486;DP=723;FS=3.729;HRun=0;HaplotypeScore=101.0977;InbreedingCoeff=0.6400;MQ=63.02;MQ0=2;MQRankSum=-2.854;QD=8.74;ReadPosRankSum=0.168;VQSLOD=3.1540;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,4:18:17.64:387,18,0	0/0:18,0:18:51.10:0,51,714	0/0:29,0:21:43.43:0,43,678	0/0:25,0:21:35.16:0,35,730	0/0:27,0:27:72.24:0,72,1115	0/0:26,0:26:75.15:0,75,1085	0/0:32,0:32:90.10:0,90,1211	0/0:33,0:33:81.17:0,81,1104	0/0:32,0:32:93.22:0,93,1455	0/0:41,0:41:99:0,120,1783	0/0:21,0:21:63.16:0,63,929	0/0:31,0:31:90.25:0,90,1408	0/0:19,0:19:57.15:0,57,877	0/0:27,0:27:81.20:0,81,1208	0/0:21,0:21:60.15:0,60,895	0/0:30,0:30:90.23:0,90,1357	0/1:25,0:25:34.62:92,0,35	0/0:20,0:20:57.05:0,57,762	0/0:15,0:15:45.05:0,45,581	0/0:25,0:25:72.11:0,72,986	0/0:32,0:32:93.26:0,93,1413	0/0:29,0:29:84.18:0,84,1220	0/0:20,0:20:57.10:0,57,806	0/0:29,0:29:87.17:0,87,1236	0/0:23,0:23:66.21:0,66,1001	0/0:33,0:33:96.28:0,96,1480	0/0:26,0:25:73.03:0,73,1034	0/0:16,0:16:45:0,45,625
chr10	94636729	.	A	AGTT	987.86	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.392;DP=722;FS=5.989;HRun=0;HaplotypeScore=98.8420;InbreedingCoeff=0.9990;MQ=62.34;MQ0=2;MQRankSum=-3.101;QD=22.97;ReadPosRankSum=-0.574;VQSLOD=2.5866;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:38.86:429,39,0	0/0:17,0:17:42.09:0,42,538	0/0:32,0:24:29.23:0,29,510	0/0:24,0:20:28.55:0,29,483	0/0:25,0:25:48.16:0,48,671	0/0:26,0:26:69.14:0,69,888	0/0:30,0:30:75.36:0,75,954	0/0:31,0:31:71.99:0,72,815	0/0:34,0:34:81.22:0,81,1103	0/0:42,0:42:99:0,102,1324	0/0:21,0:21:48.11:0,48,624	0/0:30,0:30:78.21:0,78,1064	0/0:19,0:19:48.08:0,48,637	0/0:26,0:26:66.17:0,66,885	0/0:21,0:21:48.10:0,48,608	0/0:30,0:30:75.13:0,75,979	1/1:3,22:25:33.11:681,33,0	0/0:20,0:20:48.05:0,48,597	0/0:16,0:16:36.07:0,36,425	0/0:25,0:25:62.81:0,63,736	0/0:31,0:31:69.18:0,69,928	0/0:30,0:30:75.15:0,75,959	0/0:21,0:21:57.07:0,57,695	0/0:29,0:29:72.15:0,72,909	0/0:24,0:24:51.14:0,51,673	0/0:33,0:33:78.20:0,78,1022	0/0:26,0:25:70.32:0,70,903	0/0:16,0:16:36.09:0,36,486
chr10	94638740	.	GT	G	3918.09	PASS	AB=0.907;AC=22;AF=0.393;AN=56;BaseQRankSum=1.714;DP=595;FS=1.118;HRun=10;HaplotypeScore=72.1735;InbreedingCoeff=0.8452;MQ=73.85;MQ0=0;MQRankSum=-0.744;QD=17.65;ReadPosRankSum=1.135;VQSLOD=4.3019;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,2:26:16.89:0,17,610	0/0:2,0:9:20.01:0,20,105	0/0:12,0:12:24.04:0,24,246	0/1:11,1:11:27.83:28,0,139	0/0:4,0:40:99:0,101,571	1/1:2,26:29:43.84:598,44,0	1/1:3,17:20:44.99:390,45,0	1/1:5,20:25:59.95:514,60,0	0/0:5,0:23:48.63:0,49,279	0/0:34,0:36:99:0,102,1067	0/0:28,1:29:49.15:0,49,770	1/1:3,16:19:47.98:417,48,0	1/1:3,11:14:32.99:287,33,0	1/1:1,14:15:38.99:339,39,0	0/0:2,0:26:53.97:0,54,270	0/0:3,0:16:34.24:0,34,181	0/0:18,0:18:51.14:0,51,564	0/0:3,0:12:19.84:0,20,98	0/1:19,3:23:18.17:18,0,485	0/0:34,0:36:77.85:0,78,809	0/0:10,0:10:24:0,24,244	1/1:4,22:26:59.97:521,60,0	1/1:3,21:24:53.98:469,54,0	1/1:0,9:9:24:208,24,0	0/0:3,0:20:42.81:0,43,232	0/0:30,1:31:49.86:0,50,746	0/0:27,0:26:68.96:0,69,714	1/1:0,5:5:15:130,15,0
chr10	94639733	.	T	TA	3685.58	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-12.277;DP=571;FS=1.818;HRun=8;HaplotypeScore=52.2647;InbreedingCoeff=0.9879;MQ=71.06;MQ0=0;MQRankSum=1.343;QD=30.46;ReadPosRankSum=-3.123;VQSLOD=2.4571;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:69.02:0,69,632	0/0:11,0:11:33.02:0,33,302	0/0:12,0:11:20.69:0,21,167	0/0:5,0:5:14.93:0,15,122	0/0:30,0:30:84.02:0,84,764	0/0:18,0:18:51.02:0,51,467	0/0:18,0:18:51.03:0,51,467	0/0:25,0:25:54.01:0,54,494	0/0:23,0:23:66.04:0,66,604	0/0:33,0:33:87.02:0,87,787	0/0:19,0:19:54.03:0,54,494	0/0:18,0:18:54.03:0,54,494	0/0:15,0:15:42.02:0,42,384	0/0:24,0:24:66.03:0,66,604	0/0:26,0:26:72.04:0,72,659	0/0:15,0:15:36.01:0,36,329	0/0:24,0:24:54:0,54,494	0/0:16,0:16:41.97:0,42,376	1/1:3,17:20:51.15:589,51,0	1/1:0,26:26:75.11:822,75,0	1/1:1,18:19:54.16:623,54,0	0/0:15,0:15:42.02:0,42,384	0/0:18,0:18:54.03:0,54,494	0/0:27,0:27:75.02:0,75,680	0/0:24,0:24:69.02:0,69,626	1/1:2,20:23:62.97:682,63,0	1/1:1,32:33:84.25:969,84,0	0/0:5,0:5:12:0,12,108
chr10	94639947	.	G	GTGTC	9161.65	PASS	AB=0.631;AC=22;AF=0.393;AN=56;BaseQRankSum=-13.873;DP=745;FS=4.495;HRun=0;HaplotypeScore=119.7556;InbreedingCoeff=0.8337;MQ=62.96;MQ0=0;MQRankSum=-1.133;QD=29.75;ReadPosRankSum=1.710;VQSLOD=4.6926;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:9.68:74,10,0	0/0:6,0:6:9.03:0,9,142	0/0:25,0:20:25.76:0,26,335	0/0:41,0:35:27.96:0,28,602	0/0:32,0:32:72.16:0,72,1063	1/1:8,29:38:81.28:1961,81,0	1/1:8,19:29:33.11:752,33,0	0/1:20,18:40:10.83:1120,0,11	0/0:35,0:35:99:0,99,1556	0/0:31,0:31:69.18:0,69,997	0/0:33,0:33:81.21:0,81,1220	1/1:6,20:27:42.14:1024,42,0	1/1:8,17:26:27.09:658,27,0	1/1:8,19:29:45.15:1096,45,0	0/0:29,0:29:60.19:0,60,954	0/0:16,0:16:42.13:0,42,662	1/1:8,1:17:6.02:105,6,0	0/0:19,0:19:32.59:0,33,502	0/0:18,0:18:36.12:0,36,571	0/0:35,0:35:72.22:0,72,1126	0/0:34,0:34:84.24:0,84,1308	1/1:7,11:21:27.09:658,27,0	1/1:6,14:20:17.85:439,18,0	0/1:8,15:25:7:908,0,7	0/0:29,0:29:75.20:0,75,1148	0/0:26,0:26:63.19:0,63,963	0/0:28,0:28:78.22:0,78,1222	1/1:3,8:11:15.05:366,15,0
chr10	94640166	.	AC	A	5254.27	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.661;DP=643;FS=10.956;HRun=2;HaplotypeScore=60.8821;InbreedingCoeff=0.9999;MQ=81.72;MQ0=0;MQRankSum=-2.427;QD=35.03;ReadPosRankSum=1.522;VQSLOD=4.6930;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1547	1/1:1,15:16:39.13:506,39,0	0/0:13,0:13:36.12:0,36,519	0/0:20,0:20:60.20:0,60,890	1/1:0,28:28:78.25:1008,78,0	0/0:38,0:38:99:0,111,1664	0/0:22,0:22:63.21:0,63,941	0/0:25,0:25:75.25:0,75,1124	1/1:0,22:22:60.20:779,60,0	0/0:27,0:27:81.27:0,81,1214	0/0:27,0:27:81.27:0,81,1213	0/0:24,0:24:72.24:0,72,1068	0/0:15,0:15:45.13:0,45,652	0/0:23,0:23:69.23:0,69,1031	1/1:0,22:22:66.21:857,66,0	1/1:0,21:21:54.18:701,54,0	0/0:12,0:12:36.12:0,36,539	1/1:0,19:19:54.18:701,54,0	0/0:20,0:20:60.20:0,60,899	0/0:24,0:24:69.22:0,69,1013	0/0:35,0:35:99:0,102,1526	0/0:22,0:22:66.22:0,66,988	0/0:22,0:22:63.20:0,63,914	0/0:19,0:19:57.19:0,57,854	1/1:0,22:22:54.18:701,54,0	0/0:28,0:28:81.27:0,81,1213	0/0:31,0:31:90.30:0,90,1348	0/0:11,0:11:33.11:0,33,495
chr10	94640436	.	G	GGTTTTTT	2821.26	PASS	AB=0.929;AC=5;AF=0.089;AN=56;BaseQRankSum=-1.206;DP=747;FS=8.585;HRun=0;HaplotypeScore=163.4542;InbreedingCoeff=0.7747;MQ=70.72;MQ0=1;MQRankSum=-7.869;QD=42.11;ReadPosRankSum=-0.117;VQSLOD=2.5319;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:37:57.20:2192,57,0	0/0:13,0:13:30.09:0,30,675	0/0:41,0:32:65:0,65,1223	0/0:35,0:30:35.28:0,35,916	0/0:23,0:23:66.20:0,66,1469	0/0:22,0:22:63.15:0,63,1298	0/0:34,0:34:73.92:0,74,1860	0/0:23,0:23:66.15:0,66,1304	0/0:29,0:29:81.26:0,81,1743	0/0:30,0:30:81.26:0,81,1876	0/0:16,0:16:45.12:0,45,901	0/0:20,0:20:57.20:0,57,1395	0/0:26,0:26:72.23:0,72,1610	0/0:33,0:33:87.27:0,87,1931	0/0:36,0:36:99:0,105,2286	0/0:28,0:28:81.25:0,81,1891	1/1:4,10:17:18.06:679,18,0	0/1:12,1:13:78.69:79,0,780	0/0:26,0:27:60.34:0,60,1491	0/0:28,0:28:81.24:0,81,1830	0/0:33,0:33:93.32:0,93,2179	0/0:19,0:19:51.16:0,51,1216	0/0:31,0:31:93.32:0,93,2207	0/0:40,0:40:99:0,111,2486	0/0:33,0:33:98.15:0,98,2286	0/0:27,0:27:78.25:0,78,1797	0/0:25,0:24:69.17:0,69,1489	0/0:8,0:8:21.01:0,21,416
chr10	94640912	.	GA	G	603.11	PASS	AB=0.850;AC=7;AF=0.125;AN=56;BaseQRankSum=3.716;DP=576;FS=0.478;HRun=14;HaplotypeScore=77.2255;InbreedingCoeff=0.1168;MQ=68.43;MQ0=4;MQRankSum=1.496;QD=4.28;ReadPosRankSum=3.011;VQSLOD=1.3419;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,18:35:62.42:318,0,62	0/0:6,0:6:6.24:0,6,76	0/0:43,0:21:34.61:0,35,288	0/0:24,1:11:9.42:0,9,72	0/0:15,0:18:25.55:0,26,331	0/0:19,1:20:36.82:0,37,317	0/1:13,2:16:9.29:9,0,224	0/0:22,0:25:38.65:0,39,227	0/0:22,0:23:41.18:0,41,400	0/0:11,1:14:12.31:0,12,240	0/0:20,1:23:8.14:0,8,358	0/0:20,0:20:36.01:0,36,321	0/0:19,0:20:29.66:0,30,297	0/0:17,2:20:0.02:0,0,251	0/0:19,0:19:17.28:0,17,279	0/0:12,0:12:29.18:0,29,293	1/1:6,20:27:54.11:359,54,0	0/0:30,0:31:61.94:0,62,575	0/0:19,2:23:7.61:0,8,289	0/0:21,0:21:51.03:0,51,461	0/0:16,0:17:29.12:0,29,280	0/0:9,0:9:3.76:0,4,121	0/0:13,0:13:24.01:0,24,216	0/1:15,1:18:15.37:15,0,243	0/1:22,1:24:24.57:25,0,361	0/1:18,2:20:5.96:6,0,262	0/0:22,0:23:53.73:0,54,449	0/0:3,0:7:14.49:0,14,88
chr10	94642837	.	G	GGACA	922.37	PASS	AB=0.849;AC=5;AF=0.089;AN=56;BaseQRankSum=-6.834;DP=485;FS=0.656;HRun=0;HaplotypeScore=121.6446;InbreedingCoeff=0.2124;MQ=62.22;MQ0=14;MQRankSum=1.983;QD=9.51;ReadPosRankSum=-0.242;VQSLOD=2.6135;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:29:45.82:417,46,0	0/0:4,0:4:8.97:0,9,71	0/0:21,0:11:14.65:0,15,110	0/0:21,0:7:2.15:0,2,41	0/0:22,0:21:2.01:0,2,166	0/0:25,0:25:50.44:0,50,460	0/0:20,0:20:15.17:0,15,267	0/0:8,0:8:2.96:0,3,19	0/0:14,0:13:14.75:0,15,119	0/0:17,0:17:23.79:0,24,177	0/0:14,0:14:5.99:0,6,51	0/0:15,0:15:26.16:0,26,263	0/1:16,0:15:33.50:151,0,34	0/1:27,0:27:23.37:318,0,23	0/0:17,0:17:21.37:0,21,184	0/0:12,0:12:17.21:0,17,170	0/1:4,16:23:7.36:157,0,7	0/0:13,0:14:26.71:0,27,209	0/0:9,0:8:8.81:0,9,55	0/0:26,0:26:9.01:0,9,84	0/0:13,0:13:5.99:0,6,48	0/0:16,0:16:32.07:0,32,260	0/0:18,0:18:26.90:0,27,210	0/0:31,0:31:59.95:0,60,622	0/0:7,0:7:14.97:0,15,123	0/0:15,0:15:26.77:0,27,195	0/0:27,0:27:26.62:0,27,234	0/0:2,0:2:5.95:0,6,43
chr10	94642846	.	GACAGACAGACAGACACACACAC	G	5012.80	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=7.049;DP=504;FS=6.155;HRun=0;HaplotypeScore=245.5132;InbreedingCoeff=0.7148;MQ=58.63;MQ0=17;MQRankSum=-0.484;QD=30.75;ReadPosRankSum=-0.937;VQSLOD=2.7344;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:60.18:0,60,2573	0/0:4,0:4:12:0,12,104	0/1:20,0:10:7.05:7,0,223	0/0:18,0:4:9.03:0,9,194	0/0:18,0:17:45.10:0,45,1949	0/0:25,0:25:63.20:0,63,2553	0/0:19,0:19:51.03:0,51,1339	0/1:9,0:9:24.59:53,0,25	0/0:14,0:12:21.53:0,22,927	1/1:2,18:21:44.18:932,44,0	1/1:1,12:13:6.02:363,6,0	0/0:15,0:15:44.84:0,45,2301	0/0:18,0:17:45.15:0,45,2670	0/0:26,0:26:66.68:0,67,3765	0/0:19,0:19:45.08:0,45,2012	0/0:14,0:14:24.07:0,24,1373	0/0:25,0:24:21.05:0,21,1488	0/0:16,0:14:39.02:0,39,1182	1/1:5,0:4:12.03:214,12,0	1/1:1,27:28:12.04:719,12,0	1/1:15,0:15:15.03:307,15,0	0/0:14,0:13:33.07:0,33,1799	0/0:17,0:16:38.98:0,39,1408	0/0:39,0:37:96.15:0,96,4770	0/0:9,0:8:18.02:0,18,634	1/1:2,16:18:47.79:947,48,0	1/1:2,26:32:28.47:1457,28,0	0/1:2,0:2:12.94:13,0,25
chr10	94642852	.	CAG	C	772.77	PASS	AB=0.939;AC=21;AF=0.375;AN=56;BaseQRankSum=9.129;DP=513;FS=0.000;HRun=0;HaplotypeScore=113.0289;InbreedingCoeff=0.4175;MQ=54.78;MQ0=17;MQRankSum=-1.600;QD=3.37;ReadPosRankSum=-1.227;VQSLOD=2.4115;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:57.08:0,57,967	0/0:4,0:4:11.76:0,12,72	0/0:18,0:8:22.09:0,22,284	0/0:17,0:3:8.70:0,9,126	0/1:18,1:18:36.15:36,0,237	0/0:27,0:27:60.48:0,60,455	0/0:20,0:20:38.86:0,39,276	0/1:16,0:16:74.48:74,0,136	0/1:12,2:12:14.38:14,0,91	1/1:21,0:21:12.71:171,13,0	1/1:12,0:12:5.68:28,6,0	0/0:14,0:14:37:0,37,302	0/0:18,0:17:45.14:0,45,777	0/0:27,0:27:66.64:0,67,1200	0/1:18,1:19:32.33:32,0,260	0/0:13,0:13:20.69:0,21,176	0/0:25,0:24:18.06:0,18,289	0/1:20,0:18:29.28:29,0,222	1/1:4,0:3:8.93:65,9,0	1/1:28,0:28:10.08:46,10,0	1/1:14,0:14:11.97:95,12,0	0/0:19,0:18:44.23:0,44,335	0/0:16,0:15:34.75:0,35,320	0/0:36,0:34:76.84:0,77,844	0/1:9,3:11:15.33:15,0,96	0/1:16,0:16:6.16:158,0,6	1/1:31,0:31:21.06:138,21,0	1/1:2,1:3:8.92:63,9,0
chr10	94642854	.	G	GAC	627.84	PASS	AB=0.950;AC=20;AF=0.357;AN=56;BaseQRankSum=0.283;DP=533;FS=1.366;HRun=0;HaplotypeScore=125.8072;InbreedingCoeff=0.1174;MQ=54.56;MQ0=17;MQRankSum=2.854;QD=2.54;ReadPosRankSum=-3.326;VQSLOD=1.8173;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:30.63:0,31,506	1/1:6,0:6:2.44:23,2,0	0/0:18,0:8:14.70:0,15,151	0/1:17,0:3:2.97:3,0,75	0/1:18,1:18:23.99:111,0,24	0/0:26,0:26:19.24:0,19,114	0/0:20,0:20:13.43:0,13,148	0/1:18,0:18:26.36:26,0,86	1/1:13,1:12:6.19:64,6,0	0/1:21,0:21:6.60:7,0,38	0/0:13,0:13:6.77:0,7,26	0/1:15,1:16:26.94:27,0,64	0/0:18,0:17:41.35:0,41,481	0/0:26,0:26:66.17:0,66,763	1/1:18,3:21:23.84:282,24,0	0/1:7,7:15:15.74:37,0,16	0/1:25,0:24:12.83:13,0,119	0/1:20,1:19:30.51:64,0,31	0/0:6,0:5:5.47:0,5,57	0/0:28,0:28:11.49:0,11,62	1/1:14,0:14:5.98:46,6,0	0/1:22,0:21:13.11:13,0,103	0/0:15,0:14:3.19:0,3,26	0/0:37,0:35:14.37:0,14,211	0/1:14,0:13:6.27:55,0,6	0/0:17,0:17:14.40:0,14,73	0/0:31,0:31:24.63:0,25,120	1/1:4,0:4:2.98:24,3,0
chr10	94642856	.	CAG	C	3819.20	PASS	AB=0.981;AC=35;AF=0.625;AN=56;BaseQRankSum=-4.135;DP=539;FS=29.745;HRun=0;HaplotypeScore=108.3301;InbreedingCoeff=0.2124;MQ=54.52;MQ0=17;MQRankSum=2.071;QD=9.43;ReadPosRankSum=-0.441;VQSLOD=1.6459;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:34.98:0,35,426	1/1:6,0:6:11.97:96,12,0	0/0:18,0:8:1.34:0,1,62	0/0:17,0:3:2.17:0,2,46	0/1:18,0:17:12.86:233,0,13	0/1:26,2:28:9.87:415,0,10	0/1:19,0:19:48.50:255,0,48	1/1:18,0:18:17.77:95,18,0	1/1:15,0:13:26.65:205,27,0	1/1:21,0:21:25.58:164,26,0	0/1:13,0:13:19.62:20,0,23	0/1:17,1:18:28.48:185,0,28	0/0:17,0:16:27.25:0,27,389	0/0:26,0:26:65.87:0,66,666	1/1:21,0:21:17.42:252,17,0	0/1:15,0:15:2.02:103,0,2	0/0:26,0:25:27.02:0,27,325	1/1:20,1:19:15.99:239,16,0	0/1:6,0:5:17.57:64,0,18	1/1:28,0:28:11.32:55,11,0	1/1:15,0:15:11.96:94,12,0	0/1:22,0:21:54.34:199,0,54	1/1:18,0:17:9.16:246,9,0	0/1:35,2:35:99:356,0,127	1/1:14,0:13:11.44:178,11,0	1/1:17,0:17:0.20:169,0,0	1/1:31,0:31:25.56:129,26,0	1/1:4,0:4:8.94:67,9,0
chr10	94642858	.	G	GAC	989.26	PASS	AB=0.982;AC=24;AF=0.462;AN=52;BaseQRankSum=-1.789;DP=560;FS=0.000;HRun=0;HaplotypeScore=125.4911;InbreedingCoeff=-0.1347;MQ=54.07;MQ0=21;MQRankSum=0.730;QD=2.48;ReadPosRankSum=-4.111;VQSLOD=0.8027;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,7:33:47.62:48,0,50	0/1:6,0:6:0:0,0,0	./.	./.	0/1:20,0:19:13.29:134,0,13	0/1:29,0:29:47.98:48,0,61	0/0:20,0:20:14.92:0,15,138	1/1:20,0:19:13.45:42,13,0	1/1:16,0:14:11.95:110,12,0	0/0:21,0:21:5.47:0,5,27	0/0:13,0:13:8.22:0,8,53	0/1:20,0:20:48.42:90,0,48	0/1:17,0:16:24.53:25,0,114	0/0:26,0:27:14.87:0,15,142	1/1:20,0:20:21.47:261,21,0	0/1:16,0:16:14.64:38,0,15	0/1:24,0:24:44.02:44,0,152	0/1:22,0:19:9.63:60,0,10	0/1:9,0:8:6.72:7,0,26	0/1:28,0:28:1.44:1,0,31	0/0:16,0:15:0:0,0,0	0/1:22,0:21:3.84:4,0,85	0/1:18,1:18:3.05:99,0,3	0/1:36,2:36:64.78:65,0,173	0/1:15,0:14:6.70:36,0,7	0/1:18,0:17:4.31:4,0,37	0/0:31,0:31:22.64:0,23,111	1/1:4,0:4:2.99:24,3,0
chr10	94644839	.	AACTCCT	A	767.85	PASS	AB=0.563;AC=3;AF=0.054;AN=56;BaseQRankSum=6.814;DP=543;FS=3.474;HRun=0;HaplotypeScore=109.4988;InbreedingCoeff=0.6421;MQ=72.58;MQ0=0;MQRankSum=-6.248;QD=40.41;ReadPosRankSum=0.513;VQSLOD=3.6596;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:10:30.10:578,30,0	0/0:8,0:8:24.08:0,24,904	0/0:13,0:13:39.11:0,39,1290	0/0:8,0:8:24.08:0,24,868	0/0:36,0:36:99:0,108,4063	0/0:15,0:15:45.15:0,45,1690	0/0:9,0:9:27.09:0,27,1015	0/0:30,0:30:90.30:0,90,3035	0/0:23,0:23:69.24:0,69,2557	0/0:24,0:24:72.25:0,72,2581	0/0:28,0:28:84.29:0,84,3120	0/0:13,0:13:39.13:0,39,1405	0/0:26,0:26:78.27:0,78,2924	0/0:21,0:21:60.19:0,60,2148	0/0:14,0:14:42.14:0,42,1581	0/0:15,0:15:45.15:0,45,1694	0/1:2,7:9:91.88:295,0,92	0/0:7,0:7:21.07:0,21,785	0/0:18,0:18:54.19:0,54,1944	0/0:49,0:49:99:0,147,5430	0/0:17,0:17:51.18:0,51,1920	0/0:23,0:23:69.22:0,69,2500	0/0:17,0:17:51.18:0,51,1920	0/0:8,0:8:24.08:0,24,904	0/0:22,0:22:66.23:0,66,2470	0/0:30,0:30:90.31:0,90,3381	0/0:33,0:33:99:0,99,3614	0/0:17,0:17:51.14:0,51,1808
chr10	94644846	.	GT	G	204.99	PASS	AB=0.533;AC=3;AF=0.054;AN=56;BaseQRankSum=6.605;DP=542;FS=2.163;HRun=1;HaplotypeScore=54.2394;InbreedingCoeff=0.6437;MQ=71.06;MQ0=0;MQRankSum=-6.529;QD=11.39;ReadPosRankSum=0.950;VQSLOD=1.8175;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:10:26.88:203,27,0	0/0:8,0:8:24.08:0,24,384	0/0:10,0:10:30.03:0,30,426	0/0:9,0:9:26.99:0,27,339	0/0:38,0:38:99:0,114,1796	0/0:16,0:16:48.15:0,48,744	0/0:9,0:9:27.09:0,27,418	0/0:26,0:26:78.27:0,78,1248	0/0:22,0:22:66.19:0,66,1008	0/0:23,0:23:69.23:0,69,1081	0/0:28,0:28:84.26:0,84,1293	0/0:14,0:14:42.14:0,42,672	0/0:27,0:27:78.25:0,78,1224	0/0:20,0:20:57.19:0,57,911	0/0:15,0:15:45.15:0,45,720	0/0:16,0:16:48.16:0,48,765	0/1:1,7:8:27.13:108,0,27	0/0:8,0:8:24.06:0,24,360	0/0:17,0:17:51.17:0,51,816	0/0:50,0:50:99:0,147,2322	0/0:18,0:18:54.18:0,54,860	0/0:23,0:23:69.20:0,69,1049	0/0:18,0:18:54.18:0,54,863	0/0:8,0:8:24.08:0,24,384	0/0:22,0:22:66.23:0,66,1052	0/0:31,0:31:93.32:0,93,1485	0/0:34,0:34:99:0,102,1605	0/0:14,0:14:39.09:0,39,582
chr10	94645227	.	TTTG	T	10835.53	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=3.109;DP=529;FS=6.314;HRun=0;HaplotypeScore=117.8230;InbreedingCoeff=0.9234;MQ=73.96;MQ0=1;MQRankSum=-5.535;QD=23.81;ReadPosRankSum=5.492;VQSLOD=4.2026;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:25:26.78:189,27,0	./.	0/0:33,0:26:21.37:0,21,462	0/0:40,0:33:37.78:0,38,810	1/1:5,7:12:24.04:313,24,0	1/1:8,7:15:24.06:319,24,0	1/1:9,13:22:42.14:588,42,0	1/1:25,0:25:21.07:295,21,0	1/1:7,11:18:36.12:506,36,0	1/1:5,10:15:39.12:530,39,0	1/1:4,11:15:31.22:394,31,0	1/1:6,10:16:27.09:379,27,0	1/1:6,13:19:45.14:615,45,0	1/1:8,9:17:27.09:379,27,0	1/1:12,9:22:33.08:442,33,0	1/1:6,10:16:33.11:464,33,0	1/1:7,0:9:5.95:42,6,0	1/1:6,8:14:27.07:360,27,0	1/1:9,7:17:27.06:358,27,0	1/1:4,16:20:48.12:652,48,0	1/1:15,10:25:23.72:312,24,0	1/1:5,14:19:39.13:545,39,0	1/1:5,15:20:45.15:626,45,0	1/1:11,14:25:33.11:462,33,0	1/1:2,14:16:42.14:590,42,0	1/1:14,20:34:63.21:885,63,0	1/1:5,9:14:30.10:421,30,0	1/1:5,0:5:12.04:168,12,0
chr10	94645235	.	TG	T	139.90	PASS	AB=0.682;AC=2;AF=0.036;AN=56;BaseQRankSum=4.841;DP=545;FS=2.456;HRun=1;HaplotypeScore=147.8453;InbreedingCoeff=0.1584;MQ=68.84;MQ0=1;MQRankSum=-3.706;QD=4.37;ReadPosRankSum=0.914;VQSLOD=0.3660;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:2.23:0,2,225	0/0:1,0:1:3.01:0,3,43	0/0:38,0:30:33.65:0,34,1076	0/0:43,0:36:10.42:0,10,1196	0/0:12,0:12:21.50:0,22,154	0/0:17,0:17:36.20:0,36,377	0/0:23,0:23:37.08:0,37,339	0/1:18,8:26:99:143,0,111	0/0:18,0:18:28.67:0,29,257	0/0:17,0:17:25.96:0,26,179	0/0:17,0:17:34.13:0,34,345	0/0:15,0:15:26:0,26,235	0/0:19,0:19:25.37:0,25,174	0/0:18,0:18:32.05:0,32,357	0/0:18,0:18:29.10:0,29,278	0/0:17,0:17:26.53:0,27,195	0/0:7,0:7:2.24:0,2,74	0/0:13,0:13:22.08:0,22,182	0/0:21,0:21:39.53:0,40,449	0/0:22,0:22:33.15:0,33,270	0/0:25,0:25:52.06:0,52,589	0/0:20,0:20:33.52:0,34,325	0/0:20,0:20:29.80:0,30,227	0/0:23,0:23:34.46:0,34,343	0/0:17,0:17:21.42:0,21,136	0/0:33,0:33:54.71:0,55,521	0/0:15,0:15:20.90:0,21,190	0/1:2,4:6:2.10:85,0,2
chr10	94645393	.	CCCTCCCTCCCTCCCTTCCTTCCTTCCTTCCTT	C	1834.56	PASS	AB=1.000;AC=19;AF=0.475;AN=40;BaseQRankSum=-1.034;DP=138;FS=3.334;HRun=0;HaplotypeScore=103.3933;InbreedingCoeff=0.1542;MQ=39.82;MQ0=19;MQRankSum=-1.457;QD=17.64;ReadPosRankSum=1.529;VQSLOD=1.8298;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:2.37:0,2,8	./.	./.	./.	./.	1/1:2,0:2:6.02:112,6,0	1/1:12,0:11:11.54:340,12,0	0/0:4,0:3:1.77:0,2,4	0/0:0,0:1:3.01:0,3,32	0/0:2,0:1:3.01:0,3,118	0/0:4,0:2:6.02:0,6,452	1/1:1,13:14:1.54:178,2,0	1/1:6,0:5:9.03:171,9,0	1/1:4,0:4:12.04:225,12,0	./.	./.	0/0:5,0:4:9.40:0,9,382	0/0:3,0:3:7.79:0,8,87	0/1:10,0:7:99:157,0,395	0/1:5,0:5:76.72:77,0,413	0/1:24,0:19:99:226,0,835	1/1:8,0:8:6.89:146,7,0	0/0:4,0:4:0.89:0,1,2	1/1:1,0:1:3.01:78,3,0	./.	0/1:11,0:9:99:190,0,1382	0/1:6,0:6:68.55:69,0,671	./.
chr10	94645405	.	CCCTTCCTTCCTTCCTTCCTT	C	438.13	PASS	AC=8;AF=0.250;AN=32;BaseQRankSum=-1.090;DP=149;FS=0.000;HRun=0;HaplotypeScore=82.6393;InbreedingCoeff=0.4887;MQ=41.20;MQ0=19;MQRankSum=-2.097;QD=12.17;ReadPosRankSum=-1.146;VQSLOD=1.2140;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:0.54:97,1,0	./.	./.	./.	0/0:0,0:7:11.97:0,12,124	./.	1/1:13,0:11:8.84:238,9,0	./.	./.	0/0:3,0:2:6.02:0,6,225	0/0:4,0:2:6.02:0,6,276	1/1:13,0:13:1.40:75,1,0	1/1:4,0:3:3.01:134,3,0	./.	0/0:2,0:1:2.68:0,3,11	./.	0/0:6,0:5:11.40:0,11,421	0/0:4,0:3:4.26:0,4,53	0/0:9,0:7:3.01:0,3,219	0/0:6,0:6:10.85:0,11,429	0/0:25,0:20:29.69:0,30,700	./.	0/0:1,5:6:0.89:0,1,3	./.	./.	0/0:13,0:11:18.06:0,18,951	0/0:6,0:6:9.03:0,9,374	./.
chr10	94645654	.	ACG	A	1913.91	PASS	AB=0.762;AC=20;AF=0.357;AN=56;BaseQRankSum=1.817;DP=580;FS=6.505;HRun=0;HaplotypeScore=90.1685;InbreedingCoeff=0.7710;MQ=67.30;MQ0=14;MQRankSum=-0.198;QD=8.99;ReadPosRankSum=0.519;VQSLOD=2.7950;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:74.76:0,75,555	0/0:3,0:3:7.99:0,8,48	0/0:36,0:20:38.57:0,39,308	0/0:40,0:26:50.86:0,51,352	0/0:13,0:12:19.37:0,19,111	1/1:14,2:16:38.98:392,39,0	1/1:2,27:29:18.01:241,18,0	1/1:18,0:18:50.86:434,51,0	0/0:16,0:16:25.42:0,25,150	0/0:11,0:11:21.77:0,22,160	0/0:12,0:11:17.29:0,17,116	1/1:5,19:24:17.84:199,18,0	1/1:5,17:20:11.06:118,11,0	1/1:9,1:10:4.26:45,4,0	0/0:19,0:19:38.98:0,39,233	0/0:23,0:22:34.97:0,35,208	0/1:33,0:35:24.95:25,0,180	0/0:21,0:21:49.78:0,50,327	0/0:18,0:15:19.35:0,19,141	0/0:10,0:10:23.83:0,24,212	0/0:53,0:51:83.83:0,84,1006	1/1:13,0:13:32.97:300,33,0	0/1:1,10:11:36.75:37,0,38	1/1:4,26:29:21.06:284,21,0	0/0:13,0:13:35.74:0,36,315	0/0:22,0:22:50.03:0,50,488	0/0:15,0:15:32.69:0,33,351	1/1:1,4:5:3.01:43,3,0
chr10	94645656	.	GCGCA	G	1625.47	PASS	AB=0.986;AC=21;AF=0.375;AN=56;BaseQRankSum=1.456;DP=573;FS=0.502;HRun=0;HaplotypeScore=105.7184;InbreedingCoeff=0.3015;MQ=62.92;MQ0=16;MQRankSum=-2.518;QD=6.18;ReadPosRankSum=1.281;VQSLOD=2.2949;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:74.58:0,75,546	0/1:3,0:3:17.76:18,0,33	0/0:33,0:17:38.57:0,39,308	0/0:37,0:23:50.83:0,51,351	0/1:12,0:11:32.14:32,0,78	1/1:13,3:16:24.36:363,24,0	0/1:28,1:29:1.21:51,0,1	1/1:19,0:19:50.63:435,51,0	0/1:17,0:17:83.14:83,0,96	0/1:11,0:11:1.42:1,0,129	0/0:13,0:12:17.56:0,18,116	1/1:20,1:22:6.32:112,6,0	1/1:20,1:19:3.37:62,3,0	1/1:1,8:9:2.18:30,2,0	0/1:19,0:19:99:101,0,143	0/1:22,0:21:97.37:97,0,129	0/0:34,0:33:33.97:0,34,430	0/1:21,0:21:59.18:59,0,256	0/0:15,0:12:25.31:0,25,197	0/0:12,0:11:23.75:0,24,282	0/0:59,0:57:99:0,104,1487	1/1:12,0:12:32.96:306,33,0	0/0:11,0:11:3.90:0,4,79	0/1:27,2:28:2.10:51,0,2	0/0:14,0:14:38.78:0,39,461	0/0:21,0:21:32.65:0,33,682	0/0:16,0:16:32.96:0,33,517	0/0:4,0:4:0.89:0,1,2
chr10	94645658	.	GCACA	G	1366.61	PASS	AB=0.953;AC=26;AF=0.500;AN=52;BaseQRankSum=3.184;DP=590;FS=1.431;HRun=0;HaplotypeScore=111.2328;InbreedingCoeff=0.2318;MQ=58.68;MQ0=16;MQRankSum=0.440;QD=3.98;ReadPosRankSum=2.567;VQSLOD=1.8559;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:41:3.46:9,3,0	1/1:3,0:3:3.01:47,3,0	./.	./.	1/1:5,7:11:6.02:93,6,0	0/1:16,0:16:84.76:115,0,85	0/1:32,0:32:42.24:42,0,112	0/0:22,0:21:10.21:0,10,89	1/1:9,6:18:17.80:223,18,0	1/1:6,0:11:7.17:60,7,0	1/1:7,0:12:0.47:1,0,0	0/1:24,0:24:46.61:47,0,157	0/1:21,0:19:25.45:25,0,43	0/1:9,0:9:6.86:7,0,21	1/1:10,8:20:21.02:289,21,0	1/1:11,9:21:18.05:261,18,0	0/1:24,1:31:41.85:50,0,42	0/1:18,4:23:0.37:215,0,0	0/0:18,0:16:8.47:0,8,78	0/0:13,0:12:5.95:0,6,135	0/0:58,0:57:26.43:0,26,963	1/1:12,0:12:4.59:37,5,0	0/0:12,0:12:6.01:0,6,90	0/1:34,0:32:10.52:11,0,197	0/0:15,0:15:15.04:0,15,287	0/0:21,0:21:8.99:0,9,467	0/0:11,0:16:17.80:0,18,333	0/0:4,0:4:3:0,3,27
chr10	94646950	.	A	AT	4878.17	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-14.226;DP=611;FS=8.363;HRun=9;HaplotypeScore=56.5560;InbreedingCoeff=0.9802;MQ=82.07;MQ0=0;MQRankSum=0.850;QD=26.09;ReadPosRankSum=0.250;VQSLOD=5.2192;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:86.97:0,87,755	0/0:10,0:11:26.01:0,26,209	0/0:18,0:18:35.95:0,36,307	0/0:15,0:15:32.68:0,33,257	0/0:26,0:26:71.97:0,72,625	0/0:21,0:21:62.99:0,63,547	0/0:19,0:19:50.97:0,51,439	0/0:23,0:23:59.93:0,60,508	0/0:25,0:25:68.96:0,69,595	1/1:4,17:21:51.14:564,51,0	1/1:3,18:21:54.08:579,54,0	0/0:20,0:20:53.97:0,54,465	0/0:23,0:23:65.95:0,66,566	0/0:22,0:22:59.97:0,60,517	0/0:26,0:26:65.93:0,66,566	0/0:20,0:20:59.99:0,60,521	0/0:19,0:19:53.99:0,54,469	0/0:15,0:15:23.86:0,24,208	1/1:9,19:28:54.12:580,54,0	1/1:3,19:22:31.07:559,31,0	1/1:3,19:22:48.13:531,48,0	0/0:17,0:17:47.95:0,48,410	0/0:22,0:22:59.96:0,60,517	0/0:12,0:12:32.99:0,33,286	0/0:37,0:37:95.93:0,96,825	1/1:5,25:30:81.19:878,81,0	1/1:3,40:43:99:1188,108,0	0/0:2,0:2:6:0,6,52
chr10	94647107	.	TTCTACCTG	T	1963.13	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.203;DP=627;FS=1.583;HRun=0;HaplotypeScore=152.6645;InbreedingCoeff=0.9681;MQ=78.09;MQ0=1;MQRankSum=-7.429;QD=50.34;ReadPosRankSum=-1.510;VQSLOD=3.4543;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:54.14:1455,54,0	0/0:3,0:3:9.03:0,9,417	0/0:26,0:26:74.12:0,74,3038	0/0:22,0:22:53.19:0,53,2312	0/0:20,0:20:60.21:0,60,2660	0/0:21,0:21:63.22:0,63,2739	0/0:21,0:21:63.20:0,63,2712	0/0:22,0:22:66.22:0,66,2535	0/0:26,0:26:78.26:0,78,3496	0/0:28,0:28:84.29:0,84,3801	0/0:24,0:24:72.23:0,72,2938	0/0:26,0:26:78.25:0,78,3331	0/0:27,0:27:78.27:0,78,3555	0/0:18,0:18:54.18:0,54,2381	0/0:28,0:28:84.29:0,84,3813	0/0:21,0:21:63.19:0,63,2671	1/1:0,13:13:21.02:629,21,0	0/0:14,0:14:36:0,36,1600	0/0:18,0:18:51.18:0,51,2309	0/0:35,0:35:99:0,105,4570	0/0:30,0:29:84.29:0,84,3721	0/0:18,0:18:54.16:0,54,2232	0/0:23,0:23:69.21:0,69,2888	0/0:26,0:26:78.27:0,78,3611	0/0:30,0:30:90.31:0,90,3980	0/0:23,0:23:69.23:0,69,3080	0/0:29,0:29:87.29:0,87,3606	0/0:9,0:9:27.09:0,27,1201
chr10	94648516	.	G	GGTATGTGTGT	4469.44	PASS	AB=0.919;AC=29;AF=0.518;AN=56;BaseQRankSum=1.633;DP=509;FS=0.000;HRun=0;HaplotypeScore=149.9789;InbreedingCoeff=0.1529;MQ=56.39;MQ0=20;MQRankSum=-1.098;QD=12.77;ReadPosRankSum=-4.094;VQSLOD=1.7486;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:99:397,0,197	0/1:9,0:9:26.74:27,0,102	0/0:24,0:6:8.12:0,8,92	0/0:34,0:11:10.33:0,10,158	0/0:16,0:21:33.34:0,33,261	0/1:23,0:24:99:229,0,245	0/1:20,0:20:38.47:38,0,245	1/1:23,0:22:59.64:504,60,0	0/1:16,0:16:11.61:12,0,193	1/1:18,0:16:46.21:554,46,0	1/1:8,0:10:5.99:48,6,0	0/1:11,0:13:48.70:49,0,134	0/1:8,0:8:99:166,0,144	0/0:15,0:15:29.31:0,29,209	0/0:8,0:15:29.28:0,29,228	0/0:9,0:14:30.85:0,31,264	1/1:21,0:22:59.67:633,60,0	0/0:12,0:18:29.44:0,29,281	1/1:14,0:16:27.87:413,28,0	1/1:4,7:17:8.82:279,9,0	0/1:16,0:15:32.32:109,0,32	0/1:6,0:8:17.80:77,0,18	0/1:6,0:8:58.46:58,0,83	0/1:18,0:22:94.87:137,0,95	0/0:7,0:13:15.87:0,16,127	1/1:17,0:17:42.86:505,43,0	1/1:5,15:21:6.91:191,7,0	1/1:4,0:21:5.97:44,6,0
chr10	94648818	.	A	AT	10393.16	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-12.063;DP=446;FS=14.951;HRun=5;HaplotypeScore=56.3337;InbreedingCoeff=0.7921;MQ=76.03;MQ0=0;MQRankSum=-3.421;QD=27.21;ReadPosRankSum=0.643;VQSLOD=3.3675;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:45,0:45:55.21:55,0,79	1/1:1,9:10:27.09:354,27,0	0/0:17,0:14:39.07:0,39,401	0/0:13,0:13:23.84:0,24,193	1/1:2,17:19:50.19:542,50,0	1/1:2,16:18:30.10:394,30,0	1/1:2,11:13:27.09:355,27,0	1/1:2,20:22:60.15:735,60,0	1/1:1,10:11:30.10:394,30,0	1/1:7,14:21:57.13:680,57,0	1/1:1,11:12:27.09:355,27,0	1/1:2,16:18:39.13:510,39,0	1/1:1,14:15:45.15:588,45,0	1/1:0,11:11:21.07:276,21,0	1/1:1,7:8:21.07:276,21,0	1/1:1,6:7:15.05:197,15,0	0/0:34,0:34:88.42:0,88,553	1/1:1,20:21:54.18:706,54,0	1/1:5,17:22:51.10:589,51,0	1/1:3,14:17:42.05:507,42,0	1/1:0,15:15:39.13:510,39,0	1/1:0,5:5:12.04:156,12,0	1/1:3,7:10:24.06:293,24,0	1/1:1,6:7:18.06:237,18,0	1/1:1,7:8:15.05:197,15,0	1/1:2,20:22:63.15:756,63,0	1/1:0,15:15:45.14:580,45,0	1/1:4,6:10:7.36:151,7,0
chr10	94648823	.	TC	T	657.27	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.615;DP=439;FS=7.773;HRun=8;HaplotypeScore=89.1631;InbreedingCoeff=0.9037;MQ=74.03;MQ0=0;MQRankSum=-0.535;QD=20.54;ReadPosRankSum=1.951;VQSLOD=3.5641;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,107,546	0/0:11,0:11:29.69:0,30,207	0/0:20,0:14:32.88:0,33,351	0/0:15,0:14:12.05:0,12,171	0/0:19,0:19:44.43:0,44,305	0/0:18,0:18:35.66:0,36,251	0/0:13,0:13:32.68:0,33,238	0/0:21,0:21:50.43:0,50,347	0/0:10,0:10:29.67:0,30,202	0/0:20,0:20:44.52:0,45,309	0/0:11,0:12:35.51:0,36,249	0/0:17,0:17:41.53:0,42,286	0/0:15,0:16:44.44:0,44,295	0/0:10,0:10:23.78:0,24,173	0/0:8,0:8:23.77:0,24,167	0/0:6,0:6:14.84:0,15,101	1/1:4,28:32:78.12:752,78,0	0/0:23,0:23:59.42:0,59,424	0/0:17,0:17:38.47:0,38,262	0/0:16,0:16:44.53:0,45,325	0/0:14,0:14:38.52:0,39,259	0/0:6,0:6:14.82:0,15,99	0/0:8,0:9:23.67:0,24,161	0/0:6,0:6:17.80:0,18,121	0/0:8,0:8:17.83:0,18,136	0/0:21,0:22:53.27:0,53,359	0/0:16,0:16:44:0,44,279	0/0:7,0:7:14.79:0,15,98
chr10	94648909	.	A	AT	4927.11	PASS	AB=0.833;AC=23;AF=0.426;AN=54;BaseQRankSum=-10.740;DP=409;FS=5.762;HRun=9;HaplotypeScore=44.3691;InbreedingCoeff=0.8810;MQ=64.06;MQ0=3;MQRankSum=-0.593;QD=25.66;ReadPosRankSum=-0.583;VQSLOD=5.1645;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,39:43:99:1128,102,0	0/1:4,1:5:21.18:21,0,66	0/0:12,0:11:21.29:0,21,163	0/0:15,0:7:1.76:0,2,90	0/0:18,0:18:47.99:0,48,416	1/1:3,12:15:39.11:431,39,0	1/1:2,6:8:15.04:166,15,0	1/1:8,24:32:69.17:752,69,0	0/0:10,0:10:26.99:0,27,234	0/0:15,0:13:9.40:0,9,214	0/0:8,0:8:20.42:0,20,167	1/1:7,7:14:35.92:371,36,0	1/1:2,7:9:24.06:265,24,0	1/1:0,13:13:30.08:332,30,0	0/0:7,0:7:21:0,21,182	0/0:13,0:13:32.99:0,33,287	1/1:6,16:22:51.14:564,51,0	0/0:23,0:23:50.99:0,51,442	0/0:19,0:19:47.98:0,48,417	0/0:18,0:18:41.98:0,42,364	0/0:11,0:11:29.98:0,30,257	./.	1/1:1,6:7:18.05:199,18,0	1/1:0,9:9:27.07:299,27,0	0/0:11,0:11:26.99:0,27,234	0/0:20,0:20:41.96:0,42,365	0/0:16,0:16:44.99:0,45,391	1/1:3,12:15:36.10:398,36,0
chr10	94649908	.	G	GTGTT	12613.42	PASS	AB=0.805;AC=50;AF=0.893;AN=56;BaseQRankSum=2.276;DP=498;FS=0.791;HRun=0;HaplotypeScore=133.3387;InbreedingCoeff=0.5920;MQ=57.19;MQ0=4;MQRankSum=-1.218;QD=27.42;ReadPosRankSum=-0.465;VQSLOD=4.7812;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,1:36:81.54:860,82,0	1/1:4,1:5:14.98:130,15,0	0/0:18,0:9:13.10:0,13,156	0/0:20,0:13:19.38:0,19,274	1/1:11,2:16:33.26:408,33,0	1/1:15,0:18:33.59:384,34,0	1/1:12,2:16:35.97:466,36,0	1/1:14,0:14:39.88:348,40,0	1/1:16,7:25:62.88:862,63,0	1/1:17,0:17:47.83:456,48,0	1/1:10,3:14:26.96:355,27,0	1/1:17,1:18:44.95:551,45,0	1/1:15,0:16:39.79:413,40,0	1/1:8,2:15:39.06:723,39,0	1/1:8,4:15:30.03:508,30,0	1/1:16,4:24:69.02:852,69,0	1/1:14,6:24:56.82:941,57,0	1/1:14,2:15:34.57:501,35,0	1/1:16,0:16:35.88:349,36,0	1/1:10,0:13:11.26:223,11,0	1/1:24,0:33:13.62:503,14,0	1/1:9,2:12:32.80:482,33,0	1/1:8,1:11:32.78:303,33,0	1/1:25,2:28:56.79:612,57,0	1/1:5,3:8:18.51:359,19,0	1/1:7,2:13:37.85:537,38,0	0/1:17,0:21:29.53:364,0,30	0/1:7,0:10:29.13:123,0,29
chr10	94649938	.	ACAC	A	8267.47	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-8.600;DP=530;FS=19.202;HRun=0;HaplotypeScore=141.1280;InbreedingCoeff=0.9950;MQ=69.10;MQ0=1;MQRankSum=-2.894;QD=30.62;ReadPosRankSum=0.887;VQSLOD=3.9167;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:86.35:0,86,668	1/1:0,9:9:24.08:349,24,0	0/0:21,0:19:15.50:0,15,453	0/0:19,0:15:18.53:0,19,340	1/1:6,9:15:27.05:365,27,0	0/0:4,0:12:24.08:0,24,320	0/0:2,0:15:27.09:0,27,357	0/0:19,0:20:39.10:0,39,669	1/1:5,21:26:48.11:669,48,0	1/1:6,16:22:48.15:676,48,0	1/1:5,6:11:30.10:436,30,0	0/0:3,0:18:33.11:0,33,436	0/0:3,0:18:43.38:0,43,556	0/0:8,0:15:30.10:0,30,416	1/1:2,15:17:42.14:606,42,0	1/1:3,29:32:81.27:1178,81,0	0/0:20,0:20:50.93:0,51,479	1/1:2,10:10:24.08:349,24,0	1/1:6,13:19:42.09:535,42,0	1/1:7,12:19:42.06:563,42,0	1/1:7,23:30:45.02:583,45,0	0/0:4,0:15:33.05:0,33,415	0/0:4,0:10:24.08:0,24,335	0/0:8,0:30:56.69:0,57,747	1/1:3,8:11:24.04:325,24,0	1/1:3,16:19:48.15:674,48,0	1/1:6,22:28:66.22:960,66,0	0/0:13,0:13:27.09:0,27,524
chr10	94649941	.	CCA	C	531.82	PASS	AB=0.983;AC=16;AF=0.286;AN=56;BaseQRankSum=3.630;DP=535;FS=10.849;HRun=0;HaplotypeScore=155.8937;InbreedingCoeff=-0.0485;MQ=70.70;MQ0=1;MQRankSum=-0.601;QD=1.98;ReadPosRankSum=5.600;VQSLOD=1.2198;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1774	0/1:10,0:10:16.89:32,0,17	0/0:23,0:21:46.36:0,46,713	0/0:19,0:15:31.23:0,31,520	0/1:13,2:15:25.86:26,0,32	0/0:13,0:13:33.09:0,33,401	0/0:15,0:15:33.10:0,33,399	0/0:19,0:19:51.16:0,51,869	0/1:27,0:27:47.77:48,0,121	0/1:22,0:22:44.92:45,0,149	1/1:9,1:10:21.96:76,22,0	0/0:19,0:19:45.14:0,45,542	0/0:18,0:18:48.11:0,48,569	0/0:16,0:16:45.13:0,45,627	0/1:18,0:18:49.27:49,0,74	1/1:32,0:32:21.09:137,21,0	0/0:20,0:20:54.18:0,54,986	0/1:13,0:11:29.24:29,0,57	0/1:18,0:18:22.39:22,0,114	0/1:17,1:18:43.76:44,0,71	0/1:28,0:28:31.84:32,0,140	0/0:14,0:14:39.12:0,39,486	0/0:11,0:11:30.09:0,30,378	0/0:31,0:31:71.85:0,72,935	0/1:12,0:12:22.01:22,0,67	0/1:18,0:18:35.79:54,0,36	0/1:27,1:28:56.58:88,0,57	0/0:12,0:12:33.07:0,33,578
chr10	94649955	.	AC	A	1482.76	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.992;DP=570;FS=1.243;HRun=6;HaplotypeScore=136.0055;InbreedingCoeff=0.9605;MQ=72.44;MQ0=1;MQRankSum=-3.906;QD=23.92;ReadPosRankSum=0.564;VQSLOD=1.7892;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,36:42:99:1121,105,0	0/0:12,0:12:16.12:0,16,134	0/0:19,0:17:32.40:0,32,432	0/0:23,0:19:48.08:0,48,554	0/0:15,0:15:19.37:0,19,147	0/0:10,0:11:29.73:0,30,238	0/0:15,0:15:38.82:0,39,342	0/0:21,0:21:45.04:0,45,488	0/0:26,0:26:32.62:0,33,227	0/0:19,0:20:21.61:0,22,152	0/0:13,0:13:12.22:0,12,47	0/0:20,0:20:47.78:0,48,421	0/0:17,0:17:44.54:0,45,324	0/0:17,0:18:47.80:0,48,456	0/0:22,0:22:34.80:0,35,294	0/0:40,0:40:50.99:0,51,395	1/1:3,17:20:45.11:483,45,0	0/0:15,0:14:19.13:0,19,171	0/0:21,0:21:34.11:0,34,293	0/0:21,0:21:25.68:0,26,215	0/0:29,0:29:34.67:0,35,280	0/0:17,0:17:41.80:0,42,364	0/0:10,0:10:29.85:0,30,250	0/0:32,0:32:68.37:0,68,583	0/0:12,0:12:15.23:0,15,130	0/0:19,0:19:26.61:0,27,162	0/0:29,0:28:33.56:0,34,222	0/0:11,0:11:27.09:0,27,355
chr10	94650499	.	AT	A	5238.86	PASS	AB=0.542;AC=9;AF=0.161;AN=56;BaseQRankSum=14.861;DP=774;FS=4.694;HRun=2;HaplotypeScore=84.6689;InbreedingCoeff=0.8674;MQ=86.13;MQ0=0;MQRankSum=-1.324;QD=33.16;ReadPosRankSum=3.759;VQSLOD=4.9779;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,2128	0/0:10,0:10:30.09:0,30,430	0/0:24,0:24:66.20:0,66,976	0/0:26,0:26:73.07:0,73,1042	0/0:22,0:22:66.22:0,66,989	0/0:36,0:36:99:0,108,1598	0/0:31,0:31:93.32:0,93,1393	0/0:48,0:48:99:0,144,2105	0/0:29,0:29:84.28:0,84,1254	0/0:37,0:37:99:0,111,1591	0/0:22,0:22:66.22:0,66,984	0/0:34,0:34:99:0,102,1506	0/0:30,0:30:84.26:0,84,1219	0/0:31,0:31:90.29:0,90,1328	0/0:26,0:26:75.23:0,75,1085	0/0:22,0:22:66.21:0,66,970	0/0:23,0:23:69.22:0,69,1013	0/0:18,0:18:54.14:0,54,780	1/1:1,21:22:63.19:796,63,0	1/1:1,24:25:66.21:857,66,0	1/1:1,48:49:99:1558,120,0	0/0:21,0:21:60.20:0,60,895	0/0:25,0:25:75.24:0,75,1095	0/0:20,0:20:60.20:0,60,899	0/0:20,0:20:57.19:0,57,853	0/1:4,22:26:59.68:782,0,60	1/1:0,36:36:96.31:1246,96,0	0/0:11,0:11:33.06:0,33,431
chr10	94650796	.	T	TC	910.54	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.637;DP=573;FS=5.845;HRun=1;HaplotypeScore=122.5368;InbreedingCoeff=0.9760;MQ=86.47;MQ0=1;MQRankSum=-3.341;QD=39.59;ReadPosRankSum=0.953;VQSLOD=3.0458;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:63.21:1005,63,0	0/0:6,0:6:18.06:0,18,249	0/0:23,0:23:69.14:0,69,914	0/0:15,0:15:39.13:0,39,523	0/0:12,0:12:36.12:0,36,503	0/0:17,0:17:51.17:0,51,713	0/0:23,0:23:63.21:0,63,881	0/0:21,0:21:57.19:0,57,797	0/0:20,0:20:54.17:0,54,738	0/0:18,0:18:54.18:0,54,755	0/0:13,0:13:39.13:0,39,545	0/0:30,0:30:84.28:0,84,1175	0/0:28,0:28:75.23:0,75,1029	0/0:22,0:22:57.18:0,57,794	0/0:27,0:27:75.22:0,75,1028	0/0:18,0:18:48.16:0,48,671	0/0:30,0:30:87.29:0,87,1217	0/0:21,0:21:60.20:0,60,838	0/0:19,0:19:54.18:0,54,755	0/0:22,0:22:60.19:0,60,822	0/0:42,0:41:99:0,117,1615	0/0:11,0:11:30.10:0,30,419	0/0:14,0:14:39.13:0,39,544	0/0:30,0:30:84.28:0,84,1175	0/0:15,0:15:45.15:0,45,627	0/0:22,0:22:57.19:0,57,797	0/0:26,0:26:78.25:0,78,1074	0/0:5,0:5:15.05:0,15,208
chr10	94650847	.	T	TG	25131.55	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.049;DP=607;FS=2.608;HRun=0;HaplotypeScore=109.0102;InbreedingCoeff=0.9662;MQ=81.71;MQ0=1;MQRankSum=-8.615;QD=43.71;ReadPosRankSum=4.732;VQSLOD=4.4856;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,38:40:99:1611,102,0	1/1:0,7:7:18.06:288,18,0	0/0:19,0:19:44.73:0,45,574	0/0:13,0:13:33.08:0,33,429	1/1:0,12:12:36.12:575,36,0	1/1:0,22:22:66.23:1055,66,0	1/1:0,31:31:84.29:1343,84,0	1/1:4,15:19:48.15:722,48,0	1/1:0,21:21:54.18:863,54,0	1/1:2,21:23:63.19:962,63,0	1/1:0,15:15:42.14:671,42,0	1/1:1,29:30:78.27:1246,78,0	1/1:1,27:28:69.17:1090,69,0	1/1:0,16:16:42.14:671,42,0	1/1:0,33:33:93.31:1486,93,0	1/1:0,17:17:48.16:767,48,0	1/1:0,35:35:99:1679,105,0	1/1:0,23:23:69.23:1095,69,0	1/1:1,23:25:72.24:1121,72,0	1/1:0,11:11:30.10:479,30,0	1/1:1,45:45:99:1966,123,0	1/1:2,9:11:33.10:504,33,0	1/1:0,13:13:39.13:623,39,0	1/1:0,35:35:99:1583,99,0	1/1:1,15:16:45.15:720,45,0	1/1:0,21:21:63.21:1005,63,0	1/1:0,19:19:54.18:863,54,0	1/1:2,3:5:9.03:144,9,0
chr10	94651557	.	CTT	C	9416.53	PASS	AB=0.617;AC=47;AF=0.839;AN=56;BaseQRankSum=-5.346;DP=561;FS=8.835;HRun=13;HaplotypeScore=72.3640;InbreedingCoeff=0.8357;MQ=66.68;MQ0=3;MQRankSum=-0.631;QD=18.65;ReadPosRankSum=4.833;VQSLOD=3.6378;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:18:29.95:341,30,0	1/1:2,7:9:14.96:195,15,0	0/0:14,0:6:12:0,12,131	0/0:8,0:6:11.20:0,11,90	1/1:9,23:32:59.89:572,60,0	1/1:5,19:25:59.82:565,60,0	1/1:4,9:14:20.94:253,21,0	0/1:14,3:37:22.07:22,0,191	1/1:3,11:14:17.97:175,18,0	1/1:5,29:36:80.71:812,81,0	1/1:5,22:28:52.11:633,52,0	1/1:4,14:18:35.99:348,36,0	1/1:4,12:16:26.98:262,27,0	1/1:2,11:13:29.99:290,30,0	1/1:3,13:16:36.04:349,36,0	1/1:3,15:19:38.98:428,39,0	0/0:19,0:19:45.15:0,45,641	1/1:2,14:16:39.05:378,39,0	1/1:7,16:23:48.01:465,48,0	1/1:3,30:34:83.79:797,84,0	1/1:1,6:7:15.01:145,15,0	1/1:5,8:13:17.91:165,18,0	1/1:7,20:27:57.02:553,57,0	1/1:3,13:17:20.77:253,21,0	1/1:5,21:25:53.10:522,53,0	1/1:2,15:18:45:430,45,0	1/1:9,20:29:47.95:465,48,0	0/0:3,0:14:27.45:0,27,94
chr10	94653631	.	TACACAC	T	1932.97	PASS	AB=1.000;AC=26;AF=0.500;AN=52;BaseQRankSum=1.951;DP=465;FS=14.855;HRun=0;HaplotypeScore=126.9846;InbreedingCoeff=0.4099;MQ=69.32;MQ0=14;MQRankSum=0.711;QD=7.11;ReadPosRankSum=2.545;VQSLOD=1.8404;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:40:53.71:713,54,0	0/0:8,0:8:2.97:0,3,23	0/0:30,0:23:5.78:0,6,32	0/0:22,0:19:1.98:0,2,73	./.	1/1:16,0:17:10.78:80,11,0	1/1:16,0:16:12.75:87,13,0	1/1:12,12:24:34.91:450,35,0	1/1:8,0:8:0.47:1,0,0	0/0:11,0:11:3.58:0,4,10	0/1:12,0:11:0.06:0,0,0	0/1:16,0:15:15.79:16,0,33	1/1:15,0:16:12.05:107,12,0	1/1:13,0:12:0.95:30,1,0	0/0:11,0:11:8.22:0,8,74	0/0:10,0:10:7.23:0,7,52	0/1:31,0:26:48.69:415,0,49	0/1:16,0:15:11.96:29,0,12	0/0:10,0:9:5.92:0,6,42	0/0:15,0:15:5.99:0,6,48	0/0:38,0:34:15.68:0,16,116	1/1:14,0:15:6.72:28,7,0	1/1:6,0:7:2.87:15,3,0	1/1:29,0:29:6.75:101,7,0	1/1:11,0:10:2.98:21,3,0	0/0:4,0:4:2.96:0,3,19	0/0:23,0:22:6.93:0,7,51	./.
chr10	94653633	.	CACACACACACACACACACACACACACACAT	C	2525.86	PASS	AB=0.994;AC=38;AF=0.704;AN=54;BaseQRankSum=-6.863;DP=470;FS=2.523;HRun=0;HaplotypeScore=323.9365;InbreedingCoeff=-0.0912;MQ=67.64;MQ0=18;MQRankSum=0.319;QD=5.94;ReadPosRankSum=0.678;VQSLOD=2.1238;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:40:99:117,0,1044	1/1:8,0:8:5.99:48,6,0	1/1:29,0:22:3:31,3,0	0/1:21,0:18:25.95:26,0,34	./.	0/1:15,0:15:23.90:24,0,392	0/1:16,0:16:91.96:92,0,388	0/1:25,0:25:99:157,0,118	1/1:8,0:8:8.98:72,9,0	1/1:9,0:9:9.81:68,10,0	1/1:12,0:11:6:52,6,0	0/0:17,0:16:8.61:0,9,242	0/1:16,0:16:66.33:66,0,629	1/1:13,0:12:6.13:49,6,0	1/1:10,0:10:6.46:49,6,0	1/1:10,0:10:8.94:139,9,0	0/1:35,0:30:99:182,0,2521	0/1:15,1:15:26.26:571,0,26	1/1:10,2:9:7.16:41,7,0	1/1:10,7:17:2.69:55,3,0	1/1:38,0:33:20.53:163,21,0	0/0:15,0:15:8.52:0,9,214	1/1:7,0:7:3:25,3,0	0/1:28,0:28:31.39:31,0,1273	1/1:11,0:10:6.02:200,6,0	1/1:4,0:4:5.22:33,5,0	0/1:24,0:23:5.56:389,0,6	0/0:6,0:5:3.01:0,3,345
chr10	94653661	.	CAT	C	5103.17	PASS	AB=1.000;AC=48;AF=0.923;AN=52;BaseQRankSum=-0.167;DP=398;FS=4.899;HRun=0;HaplotypeScore=88.9648;InbreedingCoeff=-0.0869;MQ=49.24;MQ0=26;MQRankSum=4.693;QD=13.12;ReadPosRankSum=3.620;VQSLOD=4.2801;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:68.08:510,68,0	1/1:4,0:4:8.98:73,9,0	./.	0/1:5,0:3:25.95:26,0,34	./.	1/1:17,0:16:32.62:249,33,0	1/1:22,0:22:51.24:394,51,0	0/1:28,0:27:85.34:186,0,85	1/1:7,0:6:11.97:96,12,0	1/1:1,3:4:10.17:69,10,0	1/1:4,4:6:5.90:40,6,0	1/1:19,0:18:35.81:272,36,0	1/1:21,0:20:59.69:458,60,0	1/1:15,0:13:26.42:211,26,0	0/1:8,0:8:9.02:82,0,9	1/1:7,0:7:8.89:62,9,0	1/1:39,0:34:87.97:668,88,0	1/1:15,0:14:29.17:195,29,0	1/1:5,0:3:6.79:40,7,0	0/1:9,0:9:6.58:12,0,7	1/1:30,0:24:7.46:186,7,0	1/1:17,0:16:29.82:229,30,0	1/1:11,0:11:11.71:82,12,0	1/1:38,0:37:77.41:620,77,0	1/1:5,0:4:9:77,9,0	1/1:4,0:4:10.93:66,11,0	1/1:14,0:13:9.68:152,10,0	1/1:5,0:4:7.23:51,7,0
chr10	94653663	.	TACAC	T	1339.36	PASS	AB=0.988;AC=22;AF=0.440;AN=50;BaseQRankSum=0.333;DP=441;FS=2.990;HRun=0;HaplotypeScore=122.6446;InbreedingCoeff=0.4794;MQ=48.50;MQ0=29;MQRankSum=0.359;QD=5.29;ReadPosRankSum=4.570;VQSLOD=2.1377;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:0.20:0,0,44	0/0:7,0:7:8.99:0,9,75	./.	./.	0/1:15,0:12:0:0,0,0	1/1:17,1:17:16.65:140,17,0	1/1:23,0:23:2.70:258,3,0	0/0:28,0:26:9.03:0,9,103	0/0:14,0:13:14.80:0,15,97	./.	1/1:9,0:7:2.60:10,3,0	1/1:16,1:16:20.88:174,21,0	1/1:21,1:21:21:124,21,0	1/1:15,0:13:15.50:161,16,0	0/0:10,0:10:3.18:0,3,49	0/0:9,0:9:5.94:0,6,42	0/1:39,0:34:29.98:30,0,184	0/1:18,0:18:1.67:2,0,99	0/0:9,0:6:4.66:0,5,22	0/0:12,0:12:6.48:0,6,63	0/0:33,0:27:12.47:0,12,119	1/1:16,1:16:21.54:275,22,0	1/1:11,0:11:7.83:81,8,0	1/1:38,0:37:27.26:236,27,0	0/1:10,0:8:12.62:13,0,19	0/0:5,0:5:2.80:0,3,13	0/0:15,0:14:3.90:0,4,21	0/0:5,0:4:2.99:0,3,24
chr10	94655360	.	AC	A	7280.01	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.811;DP=667;FS=10.821;HRun=3;HaplotypeScore=65.1780;InbreedingCoeff=0.9998;MQ=85.00;MQ0=0;MQRankSum=-0.486;QD=31.65;ReadPosRankSum=4.063;VQSLOD=4.4593;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:93.29:1153,93,0	0/0:9,0:9:27.09:0,27,389	0/0:23,0:23:66.22:0,66,916	0/0:22,0:22:57.05:0,57,719	0/0:23,0:23:66.22:0,66,948	1/1:2,26:28:66.21:818,66,0	1/1:0,17:17:33.10:409,33,0	0/0:30,0:30:87.27:0,87,1204	0/0:24,0:24:72.21:0,72,977	0/0:22,0:22:60.20:0,60,861	0/0:21,0:21:60.20:0,60,851	1/1:1,29:30:75.24:930,75,0	1/1:0,30:30:81.25:1004,81,0	1/1:0,26:26:72.23:892,72,0	0/0:29,0:29:87.25:0,87,1192	0/0:20,0:20:60.19:0,60,847	0/0:20,0:20:60.19:0,60,845	0/0:16,0:16:45.04:0,45,581	0/0:32,0:32:96.32:0,96,1373	0/0:37,0:37:99:0,108,1532	0/0:17,0:17:45.15:0,45,643	1/1:0,19:19:48.15:591,48,0	1/1:0,27:27:75.23:926,75,0	1/1:1,20:21:45.14:558,45,0	0/0:24,0:24:72.24:0,72,1035	0/0:22,0:22:66.22:0,66,950	0/0:35,0:35:99:0,105,1498	0/0:11,0:11:33.11:0,33,475
chr10	94655760	.	T	TA	2827.50	PASS	AB=0.889;AC=20;AF=0.357;AN=56;BaseQRankSum=-7.015;DP=545;FS=1.303;HRun=10;HaplotypeScore=70.8480;InbreedingCoeff=0.7162;MQ=74.18;MQ0=1;MQRankSum=0.046;QD=13.34;ReadPosRankSum=1.555;VQSLOD=3.7884;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:21:48.29:242,48,0	0/0:7,0:7:20.98:0,21,172	0/1:24,0:16:16.92:17,0,69	0/1:20,0:11:6.98:7,0,45	0/0:26,0:26:59.46:0,59,478	1/1:2,20:21:47.86:492,48,0	1/1:1,16:17:36.09:384,36,0	0/0:24,0:24:41.90:0,42,342	0/1:14,1:15:8.13:8,0,135	0/0:20,0:20:49.50:0,49,383	0/0:26,0:26:74.91:0,75,615	1/1:4,15:19:17.48:390,17,0	1/1:2,6:8:9.02:96,9,0	0/1:5,8:13:3.59:170,0,4	0/0:23,0:23:53.91:0,54,443	0/0:16,0:16:35.93:0,36,292	0/0:32,0:32:85.64:0,86,707	0/0:20,1:21:21.06:0,21,380	0/0:18,0:18:44.93:0,45,366	0/0:30,0:30:80.85:0,81,656	0/0:23,0:23:53.91:0,54,441	1/1:2,12:14:27.07:288,27,0	1/1:4,15:20:41.94:428,42,0	1/1:1,17:19:48.12:511,48,0	0/0:20,0:20:19:0,19,362	0/0:20,0:20:47.89:0,48,393	0/0:21,0:20:44.57:0,45,439	0/0:6,0:6:8.95:0,9,73
chr10	94656266	.	CTTTTCT	C	2578.58	PASS	AB=0.556;AC=31;AF=0.554;AN=56;BaseQRankSum=0.282;DP=332;FS=7.273;HRun=0;HaplotypeScore=75.5719;InbreedingCoeff=0.7653;MQ=78.88;MQ0=6;MQRankSum=-4.030;QD=21.49;ReadPosRankSum=0.143;VQSLOD=1.7468;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,1:15:27.98:434,28,0	0/0:10,0:10:27.05:0,27,536	0/0:42,0:21:33.66:0,34,328	0/0:37,0:14:11.38:0,11,186	0/0:21,0:21:60.09:0,60,1039	1/1:13,1:13:30.01:422,30,0	1/1:7,0:7:21:270,21,0	0/0:26,0:25:54.92:0,55,646	0/0:6,0:6:15.02:0,15,246	0/1:1,4:5:57.51:148,0,58	1/1:1,6:8:17.83:223,18,0	1/1:1,0:1:3.01:56,3,0	1/1:8,0:9:18.85:273,19,0	1/1:5,0:3:2.68:27,3,0	0/0:4,0:4:12.03:0,12,233	0/0:4,0:4:12.03:0,12,243	0/0:20,0:20:30.08:0,30,610	0/0:18,0:18:45.12:0,45,1022	1/1:9,2:9:13.84:145,14,0	1/1:1,3:4:5.99:88,6,0	1/1:3,0:3:5.99:51,6,0	1/1:1,0:1:2.97:20,3,0	1/1:1,0:1:3:26,3,0	1/1:4,0:4:9:79,9,0	0/0:9,0:9:27.05:0,27,593	1/1:1,13:14:23.78:325,24,0	1/1:2,11:13:9.03:202,9,0	0/0:14,0:14:36.02:0,36,448
chr10	94656270	.	TC	T	1534.28	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=1.084;DP=334;FS=1.770;HRun=1;HaplotypeScore=55.1025;InbreedingCoeff=0.7323;MQ=78.36;MQ0=7;MQRankSum=-4.521;QD=13.58;ReadPosRankSum=-0.805;VQSLOD=2.2576;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,5:17:32.57:295,33,0	0/0:9,0:9:27:0,27,245	0/0:46,4:21:32.80:0,33,273	0/0:45,3:17:10.38:0,10,99	0/0:20,0:20:59.03:0,59,484	1/1:5,7:11:29.84:244,30,0	1/1:6,2:7:20.96:173,21,0	0/0:23,0:22:22.93:0,23,280	0/0:5,0:5:14.95:0,15,123	0/1:5,0:5:17.01:65,0,17	1/1:7,0:7:17.85:130,18,0	1/1:0,1:1:3:26,3,0	1/1:4,4:8:19.67:157,20,0	1/1:3,2:3:3.89:30,4,0	0/0:4,0:4:9.89:0,10,86	0/0:4,0:4:12.01:0,12,113	0/0:19,0:19:0.38:0,0,67	0/0:16,0:16:32.49:0,32,376	1/1:9,0:7:13.82:113,14,0	1/1:3,0:3:5.98:47,6,0	1/1:2,0:2:5.99:51,6,0	1/1:1,0:1:2.97:20,3,0	1/1:1,0:1:3:26,3,0	1/1:4,0:4:9:80,9,0	0/0:9,0:9:27:0,27,251	1/1:13,0:13:23.98:204,24,0	1/1:11,0:11:9:78,9,0	0/0:14,0:14:33.72:0,34,187
chr10	94656281	.	TTTTTTTTAAA	T	1565.13	PASS	AB=1.000;AC=14;AF=0.280;AN=50;BaseQRankSum=5.244;DP=365;FS=12.085;HRun=0;HaplotypeScore=105.0263;InbreedingCoeff=0.6692;MQ=67.94;MQ0=9;MQRankSum=-5.499;QD=20.87;ReadPosRankSum=0.303;VQSLOD=1.9745;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:16:17.60:397,18,0	0/0:9,0:9:24.07:0,24,977	0/0:66,0:16:10.56:0,11,339	0/0:62,0:19:30.67:0,31,456	0/0:17,0:17:48.16:0,48,1599	1/1:6,6:11:27.07:527,27,0	1/1:5,2:6:18.03:261,18,0	0/0:24,0:23:66.23:0,66,1811	0/0:3,0:3:9.03:0,9,339	0/0:9,0:9:20.98:0,21,491	0/1:8,0:8:6.42:6,0,205	1/1:1,1:2:6.01:97,6,0	1/1:4,4:9:24.03:402,24,0	0/0:1,2:1:3.01:0,3,56	0/0:4,0:4:12.04:0,12,427	0/0:3,0:3:9.03:0,9,435	0/0:20,0:20:33.11:0,33,1285	0/0:17,0:17:51.17:0,51,2134	0/0:16,0:13:16.12:0,16,476	0/0:3,0:3:6:0,6,118	./.	./.	1/1:2,0:2:3:27,3,0	./.	0/0:10,0:10:30.10:0,30,1163	0/1:13,0:13:18.64:19,0,396	0/0:9,0:9:11.99:0,12,168	0/0:15,0:15:39.13:0,39,1242
chr10	94656286	.	TTTAAA	T	1076.10	PASS	AB=1.000;AC=11;AF=0.220;AN=50;BaseQRankSum=4.299;DP=369;FS=2.413;HRun=0;HaplotypeScore=82.5738;InbreedingCoeff=0.7538;MQ=66.48;MQ0=8;MQRankSum=-5.977;QD=19.57;ReadPosRankSum=1.126;VQSLOD=3.2481;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,10:14:14.62:186,15,0	0/0:7,0:7:21.07:0,21,533	0/0:59,0:15:15.08:0,15,238	0/0:60,0:19:35.64:0,36,427	0/0:20,0:20:46.84:0,47,907	1/1:14,0:13:25.63:345,26,0	1/1:6,0:5:15.05:227,15,0	0/0:26,0:25:65.49:0,65,1148	0/0:2,0:2:6.02:0,6,165	0/0:12,0:12:30.06:0,30,525	0/0:7,0:7:11.80:0,12,179	1/1:2,0:2:6.02:89,6,0	1/1:10,0:10:22.19:352,22,0	0/0:3,0:1:3.01:0,3,34	0/0:4,0:4:11.71:0,12,231	0/0:3,0:3:9.03:0,9,235	0/0:23,0:23:42.14:0,42,778	0/0:20,0:20:57.20:0,57,1360	0/0:16,0:13:18.86:0,19,412	0/0:6,0:6:15.04:0,15,229	./.	./.	0/1:3,0:3:40.31:40,0,53	./.	0/0:9,0:9:26.96:0,27,612	0/0:10,0:10:13.40:0,13,303	0/0:10,0:10:14.99:0,15,210	0/0:16,0:16:42.14:0,42,665
chr10	94656288	.	TAAA	T	882.02	PASS	AB=0.600;AC=11;AF=0.220;AN=50;BaseQRankSum=4.652;DP=362;FS=2.434;HRun=3;HaplotypeScore=72.4270;InbreedingCoeff=0.7670;MQ=65.65;MQ0=8;MQRankSum=-5.459;QD=16.64;ReadPosRankSum=1.984;VQSLOD=0.6682;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:14:14.71:136,15,0	0/0:7,0:7:21.07:0,21,407	0/0:56,0:14:18.36:0,18,256	0/0:58,0:18:35.28:0,35,385	0/0:19,0:19:47.69:0,48,797	1/1:7,6:12:23.94:276,24,0	1/1:3,3:5:15.05:203,15,0	0/0:28,0:27:77.27:0,77,1368	0/0:2,0:2:6.02:0,6,120	0/0:10,0:10:30.10:0,30,522	0/0:7,0:7:11.99:0,12,185	1/1:1,1:2:6.02:77,6,0	1/1:6,4:10:25.63:315,26,0	0/0:3,0:1:3.01:0,3,33	0/0:4,0:4:11.91:0,12,194	0/0:4,0:4:12.04:0,12,250	0/0:24,0:24:45.15:0,45,792	0/0:20,0:20:57.05:0,57,1092	0/0:16,0:13:29.14:0,29,480	0/0:5,0:5:15.05:0,15,232	./.	./.	0/1:1,2:3:40.37:40,0,51	./.	0/0:8,0:8:24.08:0,24,478	0/0:9,0:9:20.04:0,20,308	0/0:9,0:9:18.06:0,18,286	0/0:17,0:17:45.15:0,45,824
chr10	94656880	.	TGTGC	T	2893.60	PASS	AB=0.993;AC=43;AF=0.768;AN=56;BaseQRankSum=1.477;DP=528;FS=0.810;HRun=0;HaplotypeScore=101.1098;InbreedingCoeff=0.0930;MQ=48.31;MQ0=20;MQRankSum=3.313;QD=6.09;ReadPosRankSum=2.676;VQSLOD=2.2070;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:28:3:79,0,3	1/1:8,0:8:2.04:6,2,0	0/0:17,0:2:2.92:0,3,17	0/0:21,0:4:8.80:0,9,67	0/1:19,1:20:11.90:52,0,12	0/1:19,0:16:5.60:47,0,6	1/1:20,0:18:8.93:65,9,0	1/1:28,0:22:22.09:284,22,0	1/1:13,1:14:6.43:68,6,0	1/1:20,0:16:25.68:260,26,0	1/1:10,0:7:11.95:91,12,0	1/1:18,0:18:0.48:53,0,0	1/1:14,0:8:17.87:135,18,0	0/1:18,0:16:15.05:91,0,15	1/1:28,1:28:11.40:95,11,0	1/1:27,2:29:71.25:540,71,0	1/1:20,0:17:23.56:151,24,0	0/1:22,0:22:24.94:25,0,31	0/1:15,0:9:17.40:52,0,17	1/1:10,0:9:10.76:80,11,0	1/1:24,0:22:18.87:212,19,0	0/1:11,0:6:11.95:19,0,12	1/1:8,0:6:2.96:19,3,0	1/1:34,0:31:17.89:137,18,0	1/1:5,15:20:8.52:122,9,0	1/1:28,0:26:2.29:283,2,0	0/0:15,0:15:1.04:0,1,3	1/1:3,0:3:8.98:72,9,0
chr10	94656882	.	TGC	T	3970.13	PASS	AB=0.753;AC=47;AF=0.839;AN=56;BaseQRankSum=1.648;DP=523;FS=0.822;HRun=0;HaplotypeScore=89.0472;InbreedingCoeff=0.1750;MQ=47.49;MQ0=17;MQRankSum=3.716;QD=8.14;ReadPosRankSum=3.297;VQSLOD=3.3130;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,1:28:10.82:107,11,0	1/1:1,7:8:3.01:46,3,0	0/0:14,0:2:2.92:0,3,17	0/0:21,0:4:11.80:0,12,97	1/1:2,19:21:8.95:87,9,0	1/1:18,0:15:1.53:66,2,0	1/1:20,0:18:8.93:65,9,0	1/1:26,0:21:20.75:282,21,0	1/1:1,14:15:9.01:115,9,0	1/1:20,0:17:25.58:246,26,0	1/1:9,0:6:11.94:90,12,0	1/1:19,0:19:12.76:70,13,0	1/1:14,0:8:17.87:135,18,0	0/1:18,0:16:3.48:91,0,3	1/1:3,24:26:12.02:161,12,0	1/1:20,9:29:80.98:841,81,0	1/1:22,0:18:23.65:155,24,0	0/1:1,21:22:4.28:167,0,4	0/1:7,7:9:13.83:133,0,14	1/1:3,8:10:8.04:109,8,0	1/1:19,4:22:21.90:361,22,0	0/1:12,0:7:6.17:19,0,6	1/1:9,0:7:2.96:19,3,0	1/1:33,1:31:17.90:139,18,0	1/1:18,1:19:9:95,9,0	0/1:8,19:25:2.79:259,0,3	1/1:1,14:15:0.56:40,1,0	1/1:3,0:3:8.98:72,9,0
chr10	94656884	.	CGTGT	C	1554.03	PASS	AB=0.956;AC=26;AF=0.481;AN=54;BaseQRankSum=-4.824;DP=524;FS=17.199;HRun=0;HaplotypeScore=104.9227;InbreedingCoeff=0.2344;MQ=47.46;MQ0=16;MQRankSum=0.814;QD=4.65;ReadPosRankSum=-1.423;VQSLOD=0.9040;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:24:9.96:10,0,24	0/0:8,0:8:2.94:0,3,18	0/0:16,0:3:2.99:0,3,24	0/0:24,0:6:15.01:0,15,226	0/1:21,0:21:22.62:23,0,42	0/0:19,0:16:8.87:0,9,57	0/0:21,0:19:0:0,0,0	0/1:12,0:21:28.44:33,0,28	0/1:15,0:15:22.67:23,0,24	1/1:5,15:19:35.04:437,35,0	1/1:6,2:5:12.04:182,12,0	0/0:19,0:19:5.15:0,5,54	1/1:13,0:7:9.03:121,9,0	0/0:18,0:16:5.88:0,6,36	0/1:26,0:25:24.51:27,0,25	0/1:29,0:29:99:102,0,115	0/0:21,0:17:1.09:0,1,3	0/0:22,0:22:14.13:0,14,100	1/1:14,0:9:8.12:56,8,0	1/1:9,2:10:11.94:132,12,0	1/1:23,0:21:26.61:254,27,0	0/0:13,0:8:2.94:0,3,18	./.	1/1:33,0:31:0.89:2,1,0	0/1:19,0:19:7.85:59,0,8	1/1:25,1:24:18.07:243,18,0	0/1:15,0:15:0:0,0,0	1/1:5,0:5:4.88:13,5,0
chr10	94656892	.	T	TGCGCGC	302.95	PASS	AB=1.000;AC=3;AF=0.056;AN=54;BaseQRankSum=-0.260;DP=568;FS=0.000;HRun=0;HaplotypeScore=125.6933;InbreedingCoeff=0.2365;MQ=48.53;MQ0=15;MQRankSum=1.979;QD=6.73;ReadPosRankSum=-1.176;VQSLOD=1.7282;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:24:1.37:161,1,0	0/0:7,0:7:6.01:0,6,86	0/0:19,0:6:9.03:0,9,215	0/0:30,0:12:30.08:0,30,572	0/0:21,0:21:12.01:0,12,168	0/0:7,12:20:11.64:0,12,258	0/0:10,11:23:9.03:0,9,186	0/0:24,0:21:55.89:0,56,550	0/0:19,0:19:21.04:0,21,291	0/0:20,0:18:40.97:0,41,496	0/0:8,0:5:12.02:0,12,118	0/0:8,9:17:14.63:0,15,302	0/1:17,0:11:99:231,0,102	0/0:12,7:16:8.82:0,9,200	0/0:27,0:26:12.02:0,12,228	0/0:31,0:31:61.64:0,62,1153	0/0:26,0:22:27.83:0,28,332	0/0:23,0:23:21.03:0,21,335	0/0:16,0:12:33.05:0,33,467	0/0:12,0:10:15.05:0,15,270	0/0:23,0:22:52.79:0,53,703	./.	0/0:9,1:7:2.90:0,3,16	0/0:16,15:34:8.99:0,9,145	0/0:21,0:21:12.03:0,12,204	0/0:30,0:28:69.15:0,69,1243	0/0:16,0:16:15.05:0,15,262	0/0:6,0:6:14.21:0,14,143
chr10	94659387	.	C	CTGTGTG	2504.78	PASS	AB=1.000;AC=27;AF=0.500;AN=54;BaseQRankSum=-4.954;DP=556;FS=0.000;HRun=0;HaplotypeScore=132.9261;InbreedingCoeff=0.4803;MQ=53.03;MQ0=11;MQRankSum=-5.061;QD=9.67;ReadPosRankSum=-2.358;VQSLOD=2.2653;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:8,0:8:11.94:12,0,134	0/0:40,0:13:12.04:0,12,245	0/0:52,0:26:5.89:0,6,298	0/1:14,0:14:29.90:30,0,190	1/1:10,5:15:15.05:440,15,0	1/1:5,4:8:3.01:98,3,0	1/1:21,0:20:8.70:133,9,0	0/0:19,0:18:8.14:0,8,475	0/0:19,0:16:24.08:0,24,349	0/0:24,0:23:23.44:0,23,310	1/1:12,3:16:12.04:349,12,0	1/1:10,4:14:5.77:146,6,0	1/1:9,8:15:18.06:589,18,0	0/1:27,0:25:5.84:6,0,510	0/1:19,0:16:29.01:29,0,270	1/1:15,0:35:34.91:664,35,0	0/0:24,0:24:26.60:0,27,470	0/0:12,0:11:18.02:0,18,234	0/0:17,0:16:30.06:0,30,410	0/0:21,0:21:24.08:0,24,349	1/1:8,4:11:3.01:98,3,0	1/1:6,0:9:0.89:2,1,0	1/1:6,6:8:3.01:46,3,0	0/1:22,0:21:6.92:7,0,220	0/0:25,0:25:41.95:0,42,550	0/0:24,0:25:40.81:0,41,546	1/1:5,0:5:5.94:41,6,0
chr10	94659408	.	TGTGA	T	415.20	PASS	AB=0.939;AC=7;AF=0.130;AN=54;BaseQRankSum=-2.454;DP=450;FS=8.374;HRun=0;HaplotypeScore=91.0521;InbreedingCoeff=0.0895;MQ=41.51;MQ0=51;MQRankSum=-4.668;QD=4.56;ReadPosRankSum=-1.058;VQSLOD=1.1644;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:6:12.04:0,12,192	0/0:48,0:6:18.06:0,18,448	0/0:62,0:18:28.77:0,29,613	0/0:12,0:12:18.06:0,18,300	0/0:11,0:10:18.05:0,18,218	0/0:6,0:5:3.01:0,3,34	0/1:14,0:12:99:101,0,181	0/0:20,0:18:31.66:0,32,498	0/0:13,0:10:13.29:0,13,73	0/1:11,1:11:8.08:57,0,8	0/0:11,0:11:15:0,15,150	0/0:7,0:6:6.02:0,6,69	0/0:13,0:11:18.05:0,18,207	0/0:23,0:22:46.71:0,47,740	0/0:22,0:19:17.82:0,18,256	0/0:27,0:26:42.57:0,43,441	0/0:17,0:17:39.09:0,39,631	1/1:13,1:13:12.38:206,12,0	0/1:12,1:12:43.27:43,0,51	0/0:14,0:14:16.57:0,17,94	0/0:6,0:5:2.90:0,3,34	0/0:4,0:4:3.01:0,3,39	0/0:10,0:5:3.01:0,3,35	0/0:15,0:13:22.32:0,22,327	0/1:14,2:15:91.36:91,0,147	0/1:21,1:22:46.96:47,0,103	0/0:3,0:3:8.99:0,9,100
chr10	94659410	.	TGA	T	2803.47	PASS	AB=0.952;AC=19;AF=0.365;AN=52;BaseQRankSum=-8.111;DP=425;FS=6.547;HRun=0;HaplotypeScore=70.2670;InbreedingCoeff=0.4683;MQ=41.01;MQ0=53;MQRankSum=-0.592;QD=14.83;ReadPosRankSum=0.479;VQSLOD=2.4535;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:6:11.92:0,12,87	0/0:48,1:6:15.04:0,15,236	0/0:59,0:15:19.74:0,20,338	0/0:12,0:12:17.93:0,18,145	0/0:11,0:10:12.33:0,12,42	0/0:5,0:4:2.37:0,2,8	0/1:14,0:12:23.62:107,0,24	0/1:19,1:18:13.59:14,0,186	1/1:3,8:9:24.08:352,24,0	1/1:3,9:11:23.80:297,24,0	0/0:10,0:10:7.43:0,7,25	0/0:7,0:6:4.74:0,5,17	0/0:11,0:9:13.88:0,14,50	0/1:21,1:21:4.98:5,0,257	0/1:20,2:19:66.43:66,0,97	0/0:25,0:24:22.93:0,23,82	0/0:17,0:17:32.89:0,33,322	1/1:11,3:13:38.85:365,39,0	1/1:3,9:11:27.07:375,27,0	1/1:2,11:13:24.08:350,24,0	0/0:2,0:1:2.37:0,2,8	0/0:4,0:4:2.80:0,3,13	0/0:9,0:4:2.50:0,2,9	0/1:13,1:12:26.13:26,0,82	1/1:5,10:14:35.99:441,36,0	1/1:5,15:20:45.08:587,45,0	./.
chr10	94659468	.	TGTG	T	1383.67	PASS	AC=24;AF=0.857;AN=28;BaseQRankSum=1.373;DP=133;FS=24.178;HRun=0;HaplotypeScore=32.7793;InbreedingCoeff=0.4771;MQ=81.60;MQ0=8;MQRankSum=-5.313;QD=28.83;ReadPosRankSum=3.654;VQSLOD=1.7591;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:3.01:50,3,0	./.	0/0:32,0:27:72.25:0,72,1528	0/0:34,0:27:74.86:0,75,1593	./.	./.	1/1:0,3:3:9.03:150,9,0	1/1:4,4:7:15.01:220,15,0	./.	1/1:0,1:1:3.01:50,3,0	1/1:1,0:1:3:25,3,0	1/1:1,2:3:6.02:100,6,0	./.	1/1:0,4:3:6.02:100,6,0	./.	1/1:0,3:3:3.01:50,3,0	1/1:2,1:3:3.01:50,3,0	./.	1/1:3,10:13:30.10:500,30,0	./.	1/1:0,2:2:3.01:50,3,0	./.	./.	./.	./.	./.	1/1:1,4:5:9.03:150,9,0	./.
chr10	94659731	.	TGTGTGTGA	T	423.01	PASS	AB=1.000;AC=12;AF=0.500;AN=24;BaseQRankSum=-2.083;DP=232;FS=5.119;HRun=0;HaplotypeScore=18.8207;InbreedingCoeff=0.2973;MQ=15.92;MQ0=112;MQRankSum=1.312;QD=9.00;ReadPosRankSum=-1.003;VQSLOD=0.3401;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:2,0:2:0:0,0,0	./.	./.	0/0:9,0:7:0.47:0,0,1	./.	./.	./.	./.	0/1:6,0:3:13:40,0,13	./.	./.	0/0:3,0:2:0:0,0,0	./.	./.	./.	0/0:6,0:2:0:0,0,0	0/0:10,0:4:3.01:0,3,114	./.	./.	1/1:12,0:3:0.12:1,0,0	1/1:3,4:7:9.03:257,9,0	1/1:1,8:9:6.02:173,6,0	./.	./.	1/1:5,0:1:2.97:20,3,0	1/1:6,0:2:2.94:18,3,0	0/0:4,0:3:6.02:0,6,168
chr10	94659737	.	TGA	T	140.56	PASS	AB=0.917;AC=12;AF=0.600;AN=20;BaseQRankSum=-0.071;DP=212;FS=5.441;HRun=0;HaplotypeScore=13.3919;InbreedingCoeff=0.2736;MQ=15.40;MQ0=104;MQRankSum=0.354;QD=3.06;ReadPosRankSum=-0.495;VQSLOD=0.0131;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/1:3,3:4:10:63,0,10	./.	./.	0/1:2,0:1:0:0,0,0	./.	./.	./.	0/1:6,0:2:0:0,0,0	0/0:8,0:3:3.01:0,3,52	./.	./.	0/1:8,0:2:0:0,0,0	1/1:4,0:4:8.98:73,9,0	1/1:8,0:8:5.99:50,6,0	./.	./.	1/1:6,0:1:2.97:20,3,0	1/1:6,0:2:2.94:18,3,0	0/0:4,0:3:3.85:0,4,11
chr10	94659892	.	TGAGA	T	265.10	PASS	AB=1.000;AC=3;AF=0.071;AN=42;BaseQRankSum=-1.817;DP=333;FS=0.000;HRun=0;HaplotypeScore=19.5474;InbreedingCoeff=0.3949;MQ=21.85;MQ0=131;MQRankSum=0.017;QD=10.60;ReadPosRankSum=0.583;VQSLOD=1.2935;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/0:16,0:11:3.01:0,3,48	0/0:9,0:4:0:0,0,0	0/0:9,0:4:0:0,0,0	1/1:11,9:9:27.05:351,27,0	0/0:12,0:8:6.02:0,6,96	0/0:3,0:3:8.85:0,9,83	./.	./.	0/0:9,0:5:0:0,0,0	0/1:5,0:3:0:0,0,0	0/0:18,0:11:3.01:0,3,50	0/0:13,0:4:0:0,0,0	0/0:8,0:4:6:0,6,73	0/0:14,0:7:3.01:0,3,42	0/0:5,0:2:6.02:0,6,91	0/0:7,0:3:3.01:0,3,50	0/0:8,0:4:3.48:0,3,51	0/0:11,0:11:0.47:0,0,1	0/0:5,0:4:0:0,0,0	./.	0/0:13,0:7:6.02:0,6,130	0/0:8,0:6:15.44:0,15,203	0/0:10,0:6:9.03:0,9,151	0/0:5,0:5:11.43:0,11,109
chr10	94660026	.	TA	T	3098.53	PASS	AB=0.917;AC=15;AF=0.268;AN=56;BaseQRankSum=8.955;DP=587;FS=1.685;HRun=10;HaplotypeScore=57.1271;InbreedingCoeff=0.9302;MQ=66.36;MQ0=0;MQRankSum=2.981;QD=18.23;ReadPosRankSum=3.680;VQSLOD=4.3312;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:69.15:0,69,750	1/1:0,13:13:35.86:312,36,0	0/0:10,0:9:18.02:0,18,177	0/1:10,1:7:4.44:19,0,4	1/1:3,30:33:74.79:650,75,0	0/0:14,0:13:30.08:0,30,332	0/0:25,0:25:66.17:0,66,722	0/0:33,2:35:29.06:0,29,752	1/1:2,21:22:20.86:410,21,0	0/0:24,0:24:63.17:0,63,696	0/0:19,0:19:51.06:0,51,538	0/0:22,1:22:31.09:0,31,563	0/0:12,0:11:27.07:0,27,296	0/0:15,0:15:36.10:0,36,398	1/1:2,30:32:86.98:755,87,0	1/1:1,17:19:50.02:423,50,0	0/0:21,0:21:48.13:0,48,531	1/1:5,19:23:44.98:391,45,0	0/0:14,0:13:27.05:0,27,282	0/0:32,1:32:52.16:0,52,803	0/0:24,0:24:63.17:0,63,696	0/0:25,0:25:57.15:0,57,630	0/0:24,0:24:60:0,60,644	0/0:21,0:21:57.10:0,57,605	1/1:1,14:15:38.99:339,39,0	0/0:21,0:21:48.13:0,48,531	0/0:21,0:19:51.13:0,51,557	0/0:6,0:6:18.05:0,18,199
chr10	94663600	.	C	CTG	7271.03	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-13.442;DP=529;FS=10.988;HRun=0;HaplotypeScore=64.5675;InbreedingCoeff=0.9960;MQ=84.42;MQ0=0;MQRankSum=-1.668;QD=49.46;ReadPosRankSum=1.544;VQSLOD=5.1115;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.28:0,84,1232	0/0:6,0:6:18.06:0,18,265	0/0:27,0:27:69.14:0,69,928	0/0:21,0:20:18.04:0,18,590	0/0:26,0:26:78.25:0,78,1130	0/0:16,0:16:42.14:0,42,618	0/0:21,0:21:54.17:0,54,775	0/0:17,0:17:45.15:0,45,646	0/0:10,0:10:27.09:0,27,398	1/1:4,14:18:48.16:882,48,0	1/1:0,16:16:39.13:730,39,0	0/0:18,0:18:51.17:0,51,749	0/0:12,0:12:36.12:0,36,530	0/0:21,0:21:60.20:0,60,884	0/0:18,0:18:51.16:0,51,727	0/0:11,0:11:30.10:0,30,442	0/0:25,0:25:75.24:0,75,1082	0/0:17,0:17:51.17:0,51,747	1/1:1,16:17:51.17:952,51,0	1/1:2,22:24:60.21:1124,60,0	1/1:1,27:28:78.27:1461,78,0	0/0:21,0:21:63.20:0,63,908	0/0:21,0:21:63.20:0,63,905	0/0:20,0:20:57.19:0,57,839	0/0:17,0:17:51.17:0,51,750	1/1:2,16:18:48.16:887,48,0	1/1:1,25:26:66.23:1235,66,0	0/0:7,0:7:21.07:0,21,309
chr10	94664180	.	AT	A	6230.56	PASS	AB=0.875;AC=35;AF=0.625;AN=56;BaseQRankSum=10.012;DP=509;FS=5.146;HRun=10;HaplotypeScore=60.1416;InbreedingCoeff=0.8765;MQ=71.08;MQ0=1;MQRankSum=-1.429;QD=19.65;ReadPosRankSum=2.205;VQSLOD=5.9306;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,17:23:53.02:449,53,0	1/1:1,6:7:14.99:130,15,0	0/0:16,1:15:4.32:0,4,206	0/1:12,2:14:60.17:60,0,160	1/1:3,23:26:68.98:599,69,0	1/1:2,14:16:38.99:339,39,0	1/1:2,11:13:29.99:260,30,0	0/0:26,0:25:30.19:0,30,480	1/1:5,13:18:38.99:338,39,0	0/0:15,0:15:42.11:0,42,457	0/0:18,1:20:7.29:0,7,464	1/1:0,11:11:32.99:286,33,0	1/1:2,13:15:32.98:286,33,0	1/1:3,19:22:20.81:410,21,0	1/1:1,17:18:50.99:443,51,0	1/1:3,19:22:50.97:443,51,0	1/1:2,29:31:77.98:677,78,0	1/1:1,9:10:28.23:236,28,0	0/0:18,0:18:10.04:0,10,339	0/0:22,0:22:54.15:0,54,597	0/0:13,0:15:41.95:0,42,446	1/1:3,10:14:23.01:188,23,0	1/1:0,21:21:56.88:495,57,0	1/1:3,12:15:23.98:208,24,0	1/1:2,19:21:17.80:383,18,0	0/0:18,1:19:19.06:0,19,439	0/0:31,1:33:60.35:0,60,931	0/0:7,0:7:21.06:0,21,232
chr10	94665752	.	T	TA	4961.53	PASS	AB=0.817;AC=25;AF=0.446;AN=56;BaseQRankSum=-6.537;DP=560;FS=2.023;HRun=10;HaplotypeScore=58.3078;InbreedingCoeff=0.8164;MQ=66.64;MQ0=0;MQRankSum=0.571;QD=20.17;ReadPosRankSum=-2.035;VQSLOD=5.0974;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:54.14:576,54,0	0/0:5,0:5:11.98:0,12,99	0/0:14,0:12:14.08:0,14,110	0/1:10,0:8:10.92:11,0,34	0/0:28,0:31:81.70:0,82,636	1/1:3,16:19:39.07:405,39,0	1/1:2,10:12:30.08:320,30,0	1/1:9,1:33:72.16:425,72,0	0/0:25,0:25:71.88:0,72,585	0/0:25,0:25:65.91:0,66,542	0/0:29,0:30:76.94:0,77,622	1/1:2,20:22:51.13:543,51,0	1/1:2,21:23:57.14:608,57,0	1/1:3,14:18:38.93:398,39,0	0/0:21,0:21:50.92:0,51,415	0/0:18,0:18:44.95:0,45,369	1/1:3,23:26:63.16:672,63,0	0/0:20,0:20:50.92:0,51,419	0/0:16,0:15:35.91:0,36,289	0/0:33,0:33:77.22:0,77,617	0/1:10,1:11:5.02:5,0,170	1/1:2,13:15:34.90:357,35,0	1/1:6,14:20:39.10:416,39,0	0/1:1,7:8:3.46:171,0,3	0/0:27,0:27:77.91:0,78,640	0/0:27,0:27:65.76:0,66,529	0/0:21,1:21:62.89:0,63,511	1/1:1,0:6:11.40:57,11,0
chr10	94665994	.	CATAGCTATTAAGAATAATAAAAT	C	13471.80	PASS	AB=0.622;AC=19;AF=0.339;AN=56;BaseQRankSum=15.634;DP=566;FS=6.424;HRun=0;HaplotypeScore=325.8458;InbreedingCoeff=0.9219;MQ=72.06;MQ0=0;MQRankSum=-11.617;QD=60.68;ReadPosRankSum=-0.176;VQSLOD=2.8345;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.22:0,63,5690	0/0:4,0:4:12.04:0,12,1309	0/0:17,0:17:45.15:0,45,2871	0/0:10,0:10:27.09:0,27,1790	0/0:27,0:27:81.26:0,81,7411	0/0:22,0:22:66.18:0,66,5727	0/0:19,0:19:57.18:0,57,4625	1/1:12,18:30:53.44:564,53,0	0/0:23,0:23:69.24:0,69,6384	1/1:3,20:23:44.40:2096,44,0	1/1:4,16:17:20.30:1018,20,0	0/0:21,0:21:63.22:0,63,6586	0/0:20,0:20:60.21:0,60,5215	0/0:21,0:21:48.12:0,48,4077	0/0:25,0:25:69.24:0,69,5878	0/0:29,0:29:87.27:0,87,8211	1/1:7,16:23:18.06:985,18,0	0/0:13,0:13:39.09:0,39,3776	1/1:4,12:16:35.86:963,36,0	1/1:3,17:20:30.10:1494,30,0	0/1:9,14:23:3.61:233,0,4	0/0:12,0:12:36.12:0,36,3287	0/0:22,0:22:63.22:0,63,5836	0/0:14,0:14:39.12:0,39,3110	0/0:23,0:23:66.21:0,66,5732	1/1:5,25:30:68.83:2840,69,0	1/1:8,25:33:48.16:2900,48,0	1/1:2,2:4:6.02:379,6,0
chr10	94667070	.	C	CA	9880.97	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-10.890;DP=890;FS=2.411;HRun=0;HaplotypeScore=134.1797;InbreedingCoeff=0.9952;MQ=76.15;MQ0=0;MQRankSum=-1.408;QD=44.11;ReadPosRankSum=1.261;VQSLOD=4.2873;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,111,1552	1/1:1,12:13:33.11:528,33,0	0/0:24,0:24:34.38:0,34,732	0/0:30,0:30:74.09:0,74,931	1/1:0,30:31:81.28:1295,81,0	0/0:21,0:21:54.87:0,55,303	0/0:39,0:39:99:0,105,564	0/0:32,0:32:93.29:0,93,1256	1/1:0,38:38:99:1631,102,0	0/0:40,0:40:99:0,117,1606	0/0:19,0:19:54.18:0,54,754	0/0:47,0:47:99:0,105,651	0/0:36,0:36:51.75:0,52,479	0/0:44,0:44:99:0,124,671	1/1:0,53:53:99:2302,144,0	1/1:0,37:37:99:1727,108,0	0/0:38,0:38:99:0,114,1555	1/1:0,26:26:78.27:1247,78,0	0/0:13,0:13:36.10:0,36,484	0/0:40,0:40:99:0,114,1559	0/0:69,0:69:99:0,202,2771	0/0:19,0:19:55.17:0,55,315	0/0:14,0:14:12.82:0,13,165	0/0:27,0:27:78.09:0,78,423	1/1:0,26:26:72.25:1151,72,0	0/0:27,0:27:75.24:0,75,1034	0/0:33,0:32:99:0,99,1379	0/0:13,0:13:39.10:0,39,510
chr10	94667350	.	GTGGGGATAAGTATGTGTGAGGGTATGTA	G	1342.09	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.895;DP=758;FS=4.677;HRun=0;HaplotypeScore=545.4481;InbreedingCoeff=0.9836;MQ=78.10;MQ0=0;MQRankSum=-0.194;QD=38.35;ReadPosRankSum=-2.210;VQSLOD=-0.1544;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:93.30:0,93,9268	0/0:15,0:15:30.08:0,30,2729	0/0:30,0:30:66.23:0,66,4591	0/0:40,0:40:86.29:0,86,5233	0/0:20,0:20:48.16:0,48,5201	0/0:28,0:28:69.24:0,69,8362	0/0:26,0:26:60.21:0,60,6871	1/1:15,13:28:45.08:583,45,0	0/0:17,0:17:48.15:0,48,4622	0/0:39,0:39:99:0,99,8612	0/0:20,0:20:42.14:0,42,4673	0/0:20,0:20:57.20:0,57,5430	0/0:27,0:27:63.22:0,63,6283	0/0:27,0:27:57.20:0,57,5877	0/0:36,0:36:84.27:0,84,9194	0/0:30,0:30:75.24:0,75,6573	0/0:31,0:31:72.25:0,72,7973	0/0:27,0:27:54.63:0,55,4887	0/0:25,0:25:54.18:0,54,4153	0/0:28,0:28:72.25:0,72,7084	0/0:49,0:49:99:0,114,10661	0/0:14,0:14:42.11:0,42,4343	0/0:26,0:26:72.25:0,72,8371	0/0:33,0:33:69.24:0,69,7854	0/0:24,0:24:69.24:0,69,7395	0/0:33,0:33:78.27:0,78,8224	0/0:22,0:22:57.18:0,57,5580	1/1:0,7:7:12.04:875,12,0
chr10	94667676	.	G	GA	2358.94	PASS	AB=0.734;AC=15;AF=0.268;AN=56;BaseQRankSum=1.550;DP=506;FS=2.624;HRun=10;HaplotypeScore=63.0469;InbreedingCoeff=0.7411;MQ=76.24;MQ0=0;MQRankSum=-0.124;QD=18.01;ReadPosRankSum=1.500;VQSLOD=4.4596;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:71.89:0,72,588	0/0:9,0:9:17.91:0,18,140	0/0:19,0:18:0.20:0,0,71	0/1:9,0:9:0.01:0,0,0	0/0:20,0:22:51.98:0,52,403	0/1:4,5:9:28.23:139,0,28	1/1:3,14:17:36.09:384,36,0	0/0:27,0:27:71.88:0,72,589	0/0:19,0:19:47.94:0,48,394	0/0:28,0:29:73.95:0,74,597	0/0:22,0:22:51.99:0,52,440	1/1:2,11:13:27.07:288,27,0	1/1:1,21:23:28.86:501,29,0	1/1:3,17:20:39.10:415,39,0	0/0:25,0:25:65.92:0,66,542	0/0:22,0:22:50.91:0,51,417	0/0:20,0:20:56.91:0,57,465	0/0:16,0:16:35.86:0,36,283	0/0:19,0:19:17:0,17,293	0/0:22,0:23:61.95:0,62,498	0/0:7,0:7:11.93:0,12,98	1/1:2,8:11:22.13:209,22,0	0/1:4,15:19:3.94:370,0,4	1/1:0,9:10:23.89:238,24,0	0/0:14,1:15:3.55:0,4,214	0/0:23,0:23:50.92:0,51,419	0/0:16,1:17:14.99:0,15,319	0/0:14,0:14:41.95:0,42,345
chr10	94668196	.	C	CT	685.69	PASS	AB=0.888;AC=17;AF=0.304;AN=56;BaseQRankSum=1.177;DP=493;FS=2.546;HRun=9;HaplotypeScore=73.8275;InbreedingCoeff=0.5061;MQ=39.35;MQ0=60;MQRankSum=-4.341;QD=3.87;ReadPosRankSum=-2.286;VQSLOD=-0.2840;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:25.21:0,25,228	0/0:7,0:7:11.76:0,12,103	1/1:24,0:2:1.25:3,1,0	0/0:37,1:6:4.19:0,4,29	0/0:33,0:31:35.60:0,36,307	1/1:13,10:18:18.05:201,18,0	1/1:10,5:15:11.99:118,12,0	0/1:24,1:22:21.12:21,0,175	0/0:7,0:6:8.98:0,9,78	0/0:24,0:19:26.95:0,27,231	0/0:19,0:18:23.67:0,24,205	1/1:2,2:4:3.01:33,3,0	1/1:7,10:17:19.29:202,19,0	1/1:5,5:8:15.03:158,15,0	0/0:21,0:18:20.87:0,21,178	0/0:12,0:12:18.41:0,18,157	0/1:21,0:17:6.64:7,0,60	0/0:12,0:10:11.86:0,12,104	0/0:22,0:22:29.88:0,30,257	0/0:24,1:23:14.74:0,15,352	0/0:9,0:9:14.98:0,15,128	0/0:8,2:8:2.56:0,3,25	0/1:12,6:18:10.25:103,0,10	0/1:5,3:4:0:0,0,0	0/0:22,0:22:35.76:0,36,295	0/0:16,0:12:29.96:0,30,251	0/0:14,0:13:8.95:0,9,77	0/1:12,0:10:8.29:8,0,16
chr10	94670121	.	TA	T	3468.93	PASS	AB=0.962;AC=16;AF=0.286;AN=56;BaseQRankSum=9.905;DP=564;FS=1.647;HRun=10;HaplotypeScore=56.8250;InbreedingCoeff=0.8190;MQ=71.31;MQ0=1;MQRankSum=1.276;QD=18.85;ReadPosRankSum=0.694;VQSLOD=4.4575;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.11:0,54,575	0/0:12,0:12:21.04:0,21,220	0/1:14,0:9:19.91:20,0,122	0/1:11,1:10:19.56:20,0,69	0/0:32,0:32:87.24:0,87,962	0/0:4,0:15:34.26:0,34,190	0/0:4,0:12:22.68:0,23,113	0/0:37,1:38:61.59:0,62,889	0/0:17,0:17:45.12:0,45,498	1/1:3,15:18:44.99:391,45,0	1/1:2,29:31:86.97:751,87,0	0/0:21,0:21:51.12:0,51,555	0/0:8,0:8:21.06:0,21,232	0/0:20,0:20:54.13:0,54,589	0/0:23,0:23:60.14:0,60,647	0/0:12,0:13:38.94:0,39,412	0/0:27,0:27:78.19:0,78,853	0/0:31,0:32:75.04:0,75,809	1/1:3,11:14:32.98:284,33,0	1/1:2,31:33:86.97:754,87,0	1/1:1,6:7:12:104,12,0	0/0:16,0:16:45.12:0,45,497	0/0:18,0:18:45.11:0,45,490	0/0:8,0:8:24.05:0,24,256	0/0:28,0:28:72.19:0,72,796	1/1:3,25:28:71.98:624,72,0	1/1:4,23:27:59.99:521,60,0	0/0:20,0:20:54.62:0,55,598
chr10	94671199	.	G	GGTGTGGTAGCTC	75507	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.244;DP=704;FS=8.104;HRun=0;HaplotypeScore=227.9192;InbreedingCoeff=0.9965;MQ=61.62;MQ0=0;MQRankSum=-9.682;QD=113.54;ReadPosRankSum=4.852;VQSLOD=3.8111;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,12:33:63.15:3009,63,0	1/1:8,3:12:24.08:1151,24,0	0/0:17,0:17:41.32:0,41,1459	0/0:22,0:22:52.20:0,52,1875	1/1:13,11:27:30.10:1617,30,0	1/1:5,16:23:60.21:3425,60,0	1/1:11,16:31:72.25:4369,72,0	1/1:20,3:30:78.22:3463,78,0	1/1:11,17:32:72.25:4146,72,0	1/1:14,7:26:68.92:3455,69,0	1/1:12,13:28:41.70:2498,42,0	1/1:10,18:32:84.22:4708,84,0	1/1:11,12:27:63.22:3330,63,0	1/1:8,10:26:48.14:2615,48,0	1/1:11,15:29:74.22:4021,74,0	1/1:12,15:27:72.25:3914,72,0	1/1:12,15:32:63.15:3486,63,0	1/1:5,8:13:33.11:2029,33,0	1/1:11,4:18:48.11:1928,48,0	1/1:10,13:29:54.19:3189,54,0	1/1:10,6:25:30.10:1773,30,0	1/1:15,9:30:36.12:2106,36,0	1/1:11,8:27:38.76:2303,39,0	1/1:10,4:16:26.81:1412,27,0	1/1:13,10:26:60.21:3427,60,0	1/1:15,9:27:69.24:3323,69,0	1/1:10,12:30:60.03:3577,60,0	1/1:2,6:8:24.08:1231,24,0
chr10	94671338	.	C	CAAAT	24632.86	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-14.472;DP=724;FS=0.321;HRun=0;HaplotypeScore=99.2371;InbreedingCoeff=0.9996;MQ=66.12;MQ0=2;MQRankSum=-0.838;QD=50.07;ReadPosRankSum=3.210;VQSLOD=5.6232;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:32:69.07:1657,69,0	0/0:15,0:15:39.13:0,39,688	0/0:23,0:21:50.86:0,51,685	0/0:21,0:21:32.18:0,32,525	0/0:32,0:32:84.21:0,84,1375	1/1:0,19:20:42.14:1082,42,0	1/1:6,19:29:51.18:1315,51,0	1/1:12,22:36:71.67:1053,72,0	0/0:37,0:37:93.26:0,93,1610	1/1:4,23:26:66.01:1463,66,0	1/1:2,29:32:77.75:1647,78,0	1/1:1,18:21:39.13:981,39,0	1/1:4,18:26:42.14:1082,42,0	1/1:2,11:13:27.09:696,27,0	0/0:31,0:31:81.13:0,81,1259	0/0:25,0:25:66.02:0,66,1004	1/1:1,32:32:72.25:1855,72,0	0/0:19,0:19:42.08:0,42,684	1/1:3,17:22:56.78:872,57,0	1/1:3,35:38:99:2291,100,0	1/1:2,19:22:48.16:1238,48,0	1/1:4,23:28:68.74:1466,69,0	1/1:4,22:26:60.03:1426,60,0	1/1:3,24:28:51.18:1314,51,0	0/0:29,0:29:78.20:0,78,1263	1/1:7,10:17:51.09:1029,51,0	1/1:5,24:29:57.11:1468,57,0	1/1:0,11:11:27.09:696,27,0
chr10	94671485	.	CA	C	18964.02	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.842;DP=738;FS=4.991;HRun=7;HaplotypeScore=87.4323;InbreedingCoeff=0.9999;MQ=78.18;MQ0=0;MQRankSum=-8.646;QD=26.94;ReadPosRankSum=5.432;VQSLOD=5.1273;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,39:40:99:1163,114,0	1/1:1,17:18:51.12:520,51,0	0/0:19,0:19:39.03:0,39,420	0/0:15,0:15:39:0,39,427	1/1:2,28:30:72.16:734,72,0	1/1:3,16:19:45.10:459,45,0	1/1:3,25:28:69.15:704,69,0	1/1:4,40:44:99:1211,120,0	1/1:0,34:34:90.21:918,90,0	1/1:8,24:32:72.13:722,72,0	1/1:0,20:20:57.13:581,57,0	1/1:0,20:20:54.12:551,54,0	1/1:1,29:30:87.20:888,87,0	1/1:2,25:27:69.15:704,69,0	1/1:3,31:34:84.19:857,84,0	1/1:1,19:20:57.13:582,57,0	1/1:1,20:21:57.13:582,57,0	1/1:1,18:19:54.12:551,54,0	1/1:2,20:22:60.10:597,60,0	1/1:3,20:23:57.13:581,57,0	1/1:1,39:40:99:1163,114,0	1/1:2,28:30:75.16:764,75,0	1/1:4,23:27:60.13:612,60,0	1/1:2,29:31:84.19:857,84,0	1/1:1,23:24:69.15:704,69,0	1/1:0,23:23:69.16:704,69,0	1/1:4,23:27:66.14:673,66,0	1/1:1,20:21:57.13:581,57,0
chr10	94671891	.	C	CT	5041.51	PASS	AB=0.862;AC=22;AF=0.393;AN=56;BaseQRankSum=-11.759;DP=648;FS=8.269;HRun=10;HaplotypeScore=69.5771;InbreedingCoeff=0.7418;MQ=72.44;MQ0=0;MQRankSum=-1.762;QD=17.38;ReadPosRankSum=2.629;VQSLOD=5.3281;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,33:39:87.52:907,88,0	0/1:3,0:3:22.80:23,0,40	0/0:21,0:15:4.20:0,4,168	0/0:19,0:15:27.16:0,27,199	0/1:31,1:32:4.95:5,0,487	1/1:4,14:19:35.92:366,36,0	0/1:4,16:20:3.66:371,0,4	0/0:39,0:40:88.75:0,89,709	0/0:12,0:12:32.96:0,33,271	0/1:22,2:24:4.06:4,0,383	0/0:22,0:22:56.86:0,57,454	1/1:2,20:23:41.97:430,42,0	1/1:4,19:24:50.96:514,51,0	1/1:4,13:17:36.56:385,37,0	0/0:18,0:18:47.93:0,48,394	0/0:21,0:21:58.96:0,59,471	1/1:2,27:29:60.15:640,60,0	0/0:18,0:18:39.78:0,40,346	0/0:25,0:25:47.91:0,48,394	0/0:31,0:31:74.70:0,75,601	0/0:20,1:21:24.94:0,25,411	1/1:3,19:24:50.16:553,50,0	1/1:6,15:21:42.11:446,42,0	1/1:0,14:15:38.97:398,39,0	0/0:29,1:30:45.90:0,46,584	0/0:36,0:36:95.87:0,96,786	0/0:28,0:30:63.95:0,64,501	0/0:14,0:14:35.95:0,36,295
chr10	94674189	.	GA	G	3756.89	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-2.419;DP=571;FS=14.393;HRun=10;HaplotypeScore=107.8987;InbreedingCoeff=0.9639;MQ=64.63;MQ0=9;MQRankSum=0.954;QD=19.98;ReadPosRankSum=1.474;VQSLOD=2.8431;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,1:45:94.17:0,94,1226	0/0:0,0:7:19.89:0,20,99	0/0:20,0:9:15.39:0,15,137	0/0:17,0:7:14.96:0,15,134	0/0:5,0:28:65.76:0,66,355	0/0:20,0:20:60.16:0,60,664	0/0:21,0:21:51.12:0,51,554	0/0:31,0:29:78.17:0,78,849	0/0:2,0:10:25.71:0,26,137	1/1:5,21:26:59.65:506,60,0	1/1:2,24:26:50.96:443,51,0	0/0:12,1:13:10.04:0,10,339	0/0:13,1:15:6.85:0,7,272	0/0:19,0:19:48.13:0,48,531	0/0:4,0:16:17.17:0,17,91	0/0:2,0:12:25.57:0,26,128	1/1:3,27:30:61.01:611,61,0	0/0:5,0:34:86.02:0,86,491	1/1:3,15:17:44.99:391,45,0	1/1:5,17:22:47.97:417,48,0	1/1:2,4:6:11.99:104,12,0	0/0:15,0:15:45.12:0,45,498	0/0:10,0:10:27.07:0,27,299	0/0:11,0:11:33.09:0,33,365	0/0:5,0:25:51.28:0,51,264	1/1:5,33:38:40.04:791,40,0	1/1:2,20:22:56.99:494,57,0	0/0:14,0:14:42.09:0,42,451
chr10	94675488	.	AAGAATGAGGTT	A	642.01	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.141;DP=596;FS=3.337;HRun=0;HaplotypeScore=196.1104;InbreedingCoeff=0.9746;MQ=91.95;MQ0=0;MQRankSum=-4.498;QD=33.79;ReadPosRankSum=-0.708;VQSLOD=3.3963;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,129,6585	0/0:8,0:8:21.07:0,21,1106	0/0:21,0:21:60.21:0,60,3121	0/0:29,0:29:84.71:0,85,3753	0/0:21,0:21:60.21:0,60,3257	0/0:19,0:19:54.19:0,54,2926	0/0:18,0:18:51.17:0,51,2698	0/0:32,0:32:90.31:0,90,4434	0/0:21,0:21:63.19:0,63,3386	0/0:23,0:24:69.23:0,69,3677	0/0:21,0:21:60.21:0,60,3307	0/0:23,0:23:66.23:0,66,3762	0/0:16,0:16:48.16:0,48,2733	0/0:6,0:6:15.05:0,15,729	0/0:21,0:21:60.21:0,60,3350	0/0:19,0:19:57.20:0,57,3146	1/1:5,14:19:21.07:734,21,0	0/0:21,0:21:63.22:0,63,3484	0/0:29,0:29:78.25:0,78,3831	0/0:27,0:27:81.26:0,81,4389	0/0:28,0:28:78.27:0,78,4166	0/0:22,0:22:63.22:0,63,3341	0/0:25,0:25:69.24:0,69,3799	0/0:19,0:19:54.19:0,54,2919	0/0:9,0:9:24.08:0,24,1266	0/0:20,0:20:51.17:0,51,2745	0/0:18,0:18:51.16:0,51,2760	0/0:14,0:14:39.13:0,39,2126
chr10	94675828	.	TTGTG	T	379.46	PASS	AB=0.961;AC=6;AF=0.125;AN=48;BaseQRankSum=-0.248;DP=500;FS=4.369;HRun=0;HaplotypeScore=114.0036;InbreedingCoeff=0.3812;MQ=65.85;MQ0=22;MQRankSum=-1.931;QD=4.80;ReadPosRankSum=2.621;VQSLOD=2.0690;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:40:15.03:0,15,247	0/0:3,0:2:5.98:0,6,53	./.	./.	0/0:18,0:17:12.04:0,12,186	0/0:21,0:19:3.01:0,3,47	0/0:18,0:17:12.02:0,12,172	0/0:32,0:31:0:0,0,0	0/0:15,0:15:3.01:0,3,40	0/0:21,0:20:21.72:0,22,253	0/0:16,0:14:18.06:0,18,333	0/0:19,0:19:9.02:0,9,123	0/0:7,0:7:2.94:0,3,18	0/0:6,0:6:3.01:0,3,40	0/0:14,0:14:9.03:0,9,145	0/0:15,0:15:3.01:0,3,69	0/0:18,0:18:12.04:0,12,172	0/0:21,0:21:8.31:0,8,117	./.	1/1:7,3:12:12.03:147,12,0	0/1:30,1:29:13.88:40,0,14	0/0:10,0:10:9.03:0,9,128	0/0:18,0:18:6.01:0,6,96	0/0:21,0:20:9.47:0,9,100	0/0:13,0:12:18.06:0,18,269	0/1:19,1:20:3.70:49,0,4	1/1:8,8:15:17.85:266,18,0	./.
chr10	94680806	.	GT	G	4157.84	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.138;DP=654;FS=0.000;HRun=6;HaplotypeScore=69.2910;InbreedingCoeff=0.9981;MQ=90.70;MQ0=0;MQRankSum=-1.755;QD=28.87;ReadPosRankSum=3.327;VQSLOD=4.2995;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,1687	1/1:1,7:8:21.05:226,21,0	0/0:32,1:33:60.57:0,61,727	0/0:27,0:27:46.35:0,46,586	1/1:0,26:26:78.20:838,78,0	0/0:20,0:20:54.18:0,54,710	0/0:22,0:22:66.18:0,66,825	0/0:33,0:33:84.21:0,84,1015	1/1:2,21:23:60.15:645,60,0	0/0:36,0:36:87.28:0,87,1144	0/0:15,0:15:36.11:0,36,461	0/0:23,0:23:57.19:0,57,749	0/0:18,0:18:45.11:0,45,547	0/0:26,0:26:72.21:0,72,916	1/1:0,21:21:54.14:580,54,0	1/1:3,21:24:57.01:612,57,0	0/0:26,1:27:46:0,46,940	1/1:1,19:20:54.13:580,54,0	0/0:23,0:23:69.20:0,69,878	0/0:13,0:13:39.12:0,39,499	0/0:48,0:48:99:0,138,1770	0/0:7,0:8:20.90:0,21,251	0/0:14,0:14:42.13:0,42,539	0/0:27,0:27:69.21:0,69,892	1/1:1,21:22:63.16:677,63,0	0/0:16,0:16:42.13:0,42,539	0/0:25,0:25:56.75:0,57,819	0/0:10,0:10:24.07:0,24,301
chr10	94680957	.	ATGTGTGTGTGTGTGTG	A	2326.09	PASS	AB=0.918;AC=16;AF=0.296;AN=54;BaseQRankSum=4.633;DP=622;FS=2.885;HRun=0;HaplotypeScore=241.1530;InbreedingCoeff=0.6212;MQ=56.52;MQ0=11;MQRankSum=-4.927;QD=14.54;ReadPosRankSum=1.964;VQSLOD=2.3144;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:12.96:0,13,678	1/1:6,4:10:2.73:130,3,0	./.	0/0:32,0:26:1.55:0,2,4	1/1:17,1:17:3:92,3,0	0/0:20,0:20:15.04:0,15,516	0/0:33,0:31:45.63:0,46,2317	0/0:19,0:19:9.03:0,9,275	1/1:13,7:20:11.88:264,12,0	0/1:24,0:23:72.71:73,0,137	0/1:12,0:14:7.96:134,0,8	0/0:18,0:18:12.04:0,12,626	0/0:18,0:18:18.06:0,18,965	0/0:13,0:13:11.97:0,12,421	1/1:11,8:20:21.07:895,21,0	1/1:17,4:21:3.01:131,3,0	0/0:32,0:32:36.12:0,36,2183	1/1:11,1:13:6.01:242,6,0	0/0:17,0:16:15.27:0,15,634	0/0:14,0:14:6.02:0,6,296	0/0:40,0:39:37.68:0,38,1837	0/0:26,0:26:24.06:0,24,1471	0/0:15,0:14:17.49:0,17,1308	0/0:37,0:37:8.30:0,8,296	1/1:11,7:19:15.05:536,15,0	0/0:34,0:32:55.49:0,55,2776	0/0:22,0:21:27.02:0,27,1422	0/0:5,0:13:9.01:0,9,280
chr10	94680960	.	T	TGT	1430.28	PASS	AC=32;AF=0.667;AN=48;BaseQRankSum=-6.153;DP=632;FS=10.078;HRun=0;HaplotypeScore=138.4595;InbreedingCoeff=0.5887;MQ=54.63;MQ0=16;MQRankSum=3.682;QD=3.56;ReadPosRankSum=-3.438;VQSLOD=1.3585;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:33:9:89,9,0	0/0:10,0:10:2.84:0,3,14	./.	./.	./.	1/1:21,0:21:2.92:40,3,0	1/1:34,0:31:21.05:262,21,0	./.	0/0:20,0:20:2.84:0,3,14	0/0:21,0:19:2.10:0,2,13	0/0:15,0:15:5.44:0,5,24	1/1:21,0:20:5.24:84,5,0	1/1:17,0:17:11.87:148,12,0	1/1:12,0:12:5.04:32,5,0	0/0:21,0:20:19.89:0,20,97	0/0:19,0:19:2.84:0,3,14	1/1:28,5:34:17.99:170,18,0	0/0:14,0:13:5.68:0,6,28	1/1:19,0:18:3.01:36,3,0	1/1:14,0:14:3.01:41,3,0	1/1:43,0:42:12.39:134,12,0	1/1:27,0:27:11.99:128,12,0	1/1:16,0:15:11.83:114,12,0	1/1:37,0:37:2.82:26,3,0	0/0:18,0:18:11.32:0,11,55	1/1:36,0:34:19.96:153,20,0	1/1:24,0:22:14.45:102,14,0	1/1:13,0:13:3:26,3,0
chr10	94681675	.	G	GCA	5856.77	PASS	AB=0.636;AC=11;AF=0.196;AN=56;BaseQRankSum=-11.526;DP=838;FS=11.148;HRun=0;HaplotypeScore=100.0264;InbreedingCoeff=0.6666;MQ=63.61;MQ0=8;MQRankSum=0.086;QD=29.58;ReadPosRankSum=0.500;VQSLOD=6.1913;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,117,1420	0/0:13,0:13:27.08:0,27,327	0/0:52,0:30:45.49:0,45,663	0/0:43,0:29:47.12:0,47,535	0/0:26,0:27:66.03:0,66,778	0/0:34,0:35:87.09:0,87,1021	0/0:29,0:29:51.15:0,51,619	0/0:31,0:31:69.19:0,69,818	0/0:30,1:33:29.48:0,29,817	1/1:4,18:22:54.18:868,54,0	1/1:7,17:25:23.80:878,24,0	0/0:32,0:33:81.07:0,81,947	0/0:32,0:32:72.22:0,72,873	0/0:37,0:37:93.29:0,93,1128	0/0:32,0:32:90.26:0,90,1080	0/0:36,0:36:87.27:0,87,1056	0/0:35,0:38:95.77:0,96,1085	0/0:18,0:19:2.58:0,3,431	0/1:18,11:30:25.09:566,0,25	1/1:4,19:23:48.16:749,48,0	0/1:13,29:43:60.40:1075,0,60	0/0:23,0:23:51.16:0,51,619	0/0:12,0:12:21.05:0,21,243	0/0:30,0:30:75.21:0,75,897	0/0:17,0:19:47.80:0,48,527	0/1:10,20:31:3.59:943,0,4	1/1:5,18:24:18.66:778,19,0	0/0:12,0:12:33.10:0,33,400
chr10	94683023	.	CATTT	C	4182.05	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-2.440;DP=410;FS=9.302;HRun=0;HaplotypeScore=79.5231;InbreedingCoeff=0.9339;MQ=68.11;MQ0=10;MQRankSum=2.724;QD=35.14;ReadPosRankSum=2.076;VQSLOD=3.1529;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:38.79:0,39,904	0/0:11,0:11:27.09:0,27,652	0/0:10,0:8:12.03:0,12,177	0/0:8,0:9:3.99:0,4,20	0/0:14,0:14:33.11:0,33,838	0/0:16,0:16:48.16:0,48,1219	0/0:9,0:9:21.07:0,21,495	0/0:39,0:29:69.22:0,69,1655	0/0:9,0:9:18.06:0,18,457	1/1:3,14:17:42.14:715,42,0	1/1:3,14:17:42.14:730,42,0	0/0:11,0:11:30.10:0,30,690	0/0:9,0:9:27.09:0,27,636	0/0:9,0:9:21.07:0,21,533	0/0:11,0:11:27.09:0,27,595	0/0:13,0:13:30.10:0,30,729	0/0:22,0:22:39.13:0,39,950	0/0:22,0:22:42.14:0,42,1067	1/1:7,7:14:21.07:365,21,0	1/1:4,21:24:48.16:835,48,0	1/1:4,2:6:9.03:140,9,0	0/0:3,0:3:9.03:0,9,159	0/0:8,0:8:12.04:0,12,304	0/0:7,0:7:15.05:0,15,363	0/0:24,0:24:54.18:0,54,1304	1/1:4,23:26:63.19:1033,63,0	1/1:4,9:13:21.07:365,21,0	0/0:13,0:13:30.10:0,30,750
chr10	94689426	.	G	GGTGTGT	2809.39	PASS	AB=1.000;AC=35;AF=0.972;AN=36;DP=384;FS=0.000;HRun=0;HaplotypeScore=93.9415;InbreedingCoeff=0.1933;MQ=65.85;MQ0=18;QD=9.75;VQSLOD=1.8165;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:22:9.03:159,9,0	./.	./.	./.	1/1:10,0:11:6.02:136,6,0	1/1:20,0:20:17.66:216,18,0	1/1:29,0:29:11.81:180,12,0	./.	1/1:4,0:5:6.02:146,6,0	1/1:10,0:12:10.27:112,10,0	1/1:3,0:4:3.01:48,3,0	1/1:4,6:13:3.01:95,3,0	./.	1/1:7,0:7:9.03:181,9,0	1/1:7,0:7:3.01:52,3,0	0/1:5,0:5:0:0,0,0	1/1:28,2:34:33.38:562,33,0	1/1:15,0:13:6.02:155,6,0	./.	./.	1/1:29,0:27:5.99:95,6,0	./.	./.	1/1:28,0:29:18.06:356,18,0	1/1:16,0:16:12.04:213,12,0	1/1:20,0:20:10.16:178,10,0	1/1:7,0:6:0.47:1,0,0	./.
chr10	94689914	.	C	CGTGT	3546.12	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=-1.741;DP=632;FS=12.428;HRun=0;HaplotypeScore=113.7027;InbreedingCoeff=0.3050;MQ=59.15;MQ0=9;MQRankSum=0.970;QD=6.36;ReadPosRankSum=2.062;VQSLOD=1.8926;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:5.79:38,6,0	1/1:5,0:6:9.03:127,9,0	0/0:31,0:15:5.59:0,6,81	./.	1/1:4,0:9:2.74:12,3,0	1/1:24,0:24:12.91:149,13,0	1/1:17,1:34:7.60:67,8,0	1/1:31,0:29:18.25:156,18,0	1/1:10,0:23:4.07:12,4,0	1/1:10,0:18:20.13:268,20,0	1/1:3,0:8:6.75:23,7,0	1/1:12,0:32:4.98:24,5,0	1/1:12,0:12:6.91:89,7,0	1/1:10,0:29:2.90:52,3,0	1/1:9,0:18:9.01:168,9,0	1/1:9,1:15:11.67:245,12,0	1/1:34,0:33:9.58:110,10,0	1/1:22,16:41:33.04:660,33,0	1/1:18,0:16:16.27:178,16,0	1/1:5,0:4:6.02:99,6,0	1/1:29,3:57:11.75:179,12,0	0/0:4,0:10:2.49:0,2,10	1/1:10,0:10:5.67:60,6,0	1/1:16,16:36:4.58:142,5,0	1/1:9,2:13:7.48:223,7,0	1/1:17,0:29:28.85:390,29,0	1/1:10,0:14:3.90:54,4,0	1/1:4,0:4:2.97:20,3,0
chr10	94690431	.	AAGGTAGGGTCATGGTGACCCACAGTCACATAAG	A	10437.51	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.726;DP=566;FS=9.729;HRun=0;HaplotypeScore=453.2655;InbreedingCoeff=0.9610;MQ=83.62;MQ0=0;MQRankSum=-10.661;QD=119.97;ReadPosRankSum=5.691;VQSLOD=3.0312;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:51:99:0,148,16924	1/1:2,3:5:5.69:518,6,0	0/0:16,0:17:51.01:0,51,3336	0/0:22,0:22:63.18:0,63,3193	1/1:4,10:14:27.09:1886,27,0	0/0:24,0:24:72.25:0,72,9031	0/0:31,0:31:93.32:0,93,10010	0/0:25,0:25:72.25:0,72,5719	1/1:5,9:14:27.09:2336,27,0	0/0:15,0:15:36.12:0,36,4231	0/0:11,0:11:30.10:0,30,4226	0/0:33,0:33:96.80:0,97,12119	0/0:12,0:12:36.12:0,36,4610	0/0:26,0:26:75.26:0,75,9183	1/1:5,8:13:21.07:1817,21,0	1/1:4,9:13:24.08:2077,24,0	0/0:23,0:23:69.24:0,69,9283	1/1:8,7:15:9.03:773,9,0	0/0:16,0:16:42.14:0,42,2824	0/0:17,0:17:51.18:0,51,7041	0/0:49,0:49:99:0,147,17934	0/0:18,0:18:45.14:0,45,5713	0/0:13,0:13:36.11:0,36,4096	0/0:30,0:30:87.30:0,87,9686	1/1:8,5:13:12.04:1031,12,0	0/0:19,0:19:57.20:0,57,6977	0/0:17,0:17:45.11:0,45,5571	0/0:9,0:9:27.09:0,27,3099
chr10	94691118	.	A	AG	9670.04	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-9.444;DP=736;FS=0.290;HRun=4;HaplotypeScore=119.3597;InbreedingCoeff=0.9996;MQ=77.93;MQ0=1;MQRankSum=-1.639;QD=37.19;ReadPosRankSum=2.119;VQSLOD=3.4449;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,48:48:99:1929,141,0	0/0:9,0:9:24.07:0,24,272	0/0:22,0:23:60.62:0,61,657	0/0:23,0:20:51.06:0,51,521	0/0:27,0:27:72.20:0,72,816	1/1:0,19:19:48.16:657,48,0	1/1:1,26:27:75.25:1026,75,0	0/0:33,0:33:84.23:0,84,946	0/0:29,0:29:78.22:0,78,885	0/0:25,0:25:72.20:0,72,816	0/0:20,0:20:54.14:0,54,604	1/1:2,19:21:60.20:816,60,0	1/1:1,27:28:78.26:1063,78,0	1/1:1,19:20:54.18:738,54,0	0/0:34,0:34:93.23:0,93,1036	0/0:29,0:29:84.22:0,84,943	0/0:36,0:36:99:0,105,1180	0/0:19,0:19:54.11:0,54,597	0/0:25,0:25:69.20:0,69,782	0/0:16,0:16:45.13:0,45,510	0/0:50,0:50:99:0,138,1545	1/1:2,18:20:51.17:698,51,0	1/1:5,19:24:51.17:692,51,0	1/1:1,52:53:99:2052,150,0	0/0:18,0:18:51.13:0,51,567	0/0:29,0:29:69.19:0,69,783	0/0:21,0:21:57.15:0,57,637	0/0:10,0:10:30.09:0,30,340
chr10	94692030	.	GTCC	G	5057.58	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.191;DP=638;FS=12.861;HRun=0;HaplotypeScore=108.6195;InbreedingCoeff=0.9990;MQ=80.91;MQ0=0;MQRankSum=-2.885;QD=35.37;ReadPosRankSum=1.802;VQSLOD=4.9275;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,2246	1/1:0,7:7:21.03:308,21,0	0/0:15,0:15:42.11:0,42,833	0/0:22,0:22:54.18:0,54,1076	1/1:1,19:20:42.14:664,42,0	0/0:19,0:19:57.20:0,57,1237	0/0:27,0:27:72.25:0,72,1588	0/0:28,0:28:81.28:0,81,1751	1/1:3,30:33:71.99:1146,72,0	0/0:29,0:29:81.27:0,81,1720	0/0:11,0:11:33.11:0,33,716	0/0:25,0:25:69.24:0,69,1505	0/0:20,0:20:60.21:0,60,1305	0/0:21,0:21:57.19:0,57,1227	1/1:2,21:23:54.18:867,54,0	1/1:2,19:21:51.17:819,51,0	0/0:29,0:29:84.29:0,84,1816	1/1:5,18:23:48.16:771,48,0	0/0:30,0:30:87.28:0,87,1764	0/0:14,0:14:36.08:0,36,748	0/0:53,0:53:99:0,132,2895	0/0:18,0:18:51.18:0,51,1111	0/0:15,0:15:42.14:0,42,906	0/0:34,0:34:75.26:0,75,1655	1/1:0,16:16:30.10:482,30,0	0/0:15,0:15:45.15:0,45,991	0/0:20,0:20:57.20:0,57,1249	0/0:12,0:12:36.12:0,36,794
chr10	94692081	.	GCCGTGCTCCTCCAGGGTCTCCGTGCTCCTCCAGGGTCT	G	3954.88	PASS	AC=46;AF=0.920;AN=50;BaseQRankSum=3.436;DP=495;FS=1.653;HRun=0;HaplotypeScore=446.4224;InbreedingCoeff=0.5041;MQ=72.37;MQ0=0;MQRankSum=0.957;QD=9.42;ReadPosRankSum=4.315;VQSLOD=0.3393;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:44.52:374,45,0	1/1:6,0:6:8.92:80,9,0	0/0:18,0:16:9.01:0,9,147	0/0:24,0:22:1.86:0,2,205	1/1:17,0:17:2.91:18,3,0	1/1:13,0:13:11.89:134,12,0	1/1:18,0:18:14.77:95,15,0	./.	1/1:25,0:25:26.64:174,27,0	1/1:10,12:22:29.73:409,30,0	1/1:4,0:4:3:26,3,0	1/1:18,0:18:26.78:321,27,0	1/1:14,0:14:11.84:105,12,0	1/1:16,0:16:20.61:180,21,0	1/1:18,0:18:32.34:201,32,0	1/1:11,0:11:11.88:108,12,0	1/1:17,0:17:26.64:175,27,0	1/1:21,0:21:23.86:179,24,0	1/1:27,0:27:23.68:157,24,0	1/1:11,0:11:3.01:38,3,0	1/1:34,0:34:7.65:66,8,0	./.	1/1:3,0:3:2.92:17,3,0	1/1:25,0:25:11.95:166,12,0	1/1:20,0:20:26.47:227,26,0	1/1:9,21:30:51.69:532,52,0	1/1:17,0:17:26.60:174,27,0	./.
chr10	94692116	.	GTCTCCGT	G	1685.15	PASS	AB=0.962;AC=24;AF=0.480;AN=50;BaseQRankSum=-9.026;DP=398;FS=13.781;HRun=0;HaplotypeScore=137.7939;InbreedingCoeff=-0.7794;MQ=42.79;MQ0=20;MQRankSum=-2.803;QD=4.96;ReadPosRankSum=2.803;VQSLOD=1.9187;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:99:203,0,1070	0/1:10,0:10:31.90:32,0,507	0/0:25,0:6:18.03:0,18,426	0/0:22,0:11:23.22:0,23,816	1/1:10,0:10:3.41:18,3,0	0/1:10,0:10:30.93:31,0,529	0/1:13,0:13:58.82:59,0,628	./.	0/1:22,0:22:99:118,0,863	0/1:12,0:12:22.88:23,0,610	0/1:3,0:3:19.98:20,0,71	0/1:19,0:19:99:140,0,453	0/1:12,0:12:46.85:47,0,643	0/1:16,0:16:72.86:73,0,469	0/1:16,0:16:99:160,0,254	0/1:10,0:10:51.86:52,0,585	0/1:19,0:19:99:125,0,688	0/1:16,0:16:99:138,0,550	0/1:2,9:11:99:127,0,167	0/1:4,7:11:10.98:11,0,79	0/1:19,0:19:48.31:48,0,759	./.	0/1:5,0:5:10.98:11,0,87	0/1:21,0:21:44.66:45,0,1056	0/1:18,0:18:99:149,0,424	0/1:21,0:21:69.80:70,0,848	0/1:16,0:15:99:132,0,471	./.
chr10	94693289	.	TAGGCAGGC	T	2546.13	PASS	AB=0.664;AC=10;AF=0.179;AN=56;BaseQRankSum=10.395;DP=644;FS=3.241;HRun=0;HaplotypeScore=164.6168;InbreedingCoeff=0.7189;MQ=59.71;MQ0=3;MQRankSum=-8.202;QD=17.81;ReadPosRankSum=1.649;VQSLOD=3.0380;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,9:30:64.51:100,0,65	0/0:4,0:4:12.04:0,12,456	0/0:34,0:32:48.44:0,48,2114	0/0:31,0:29:40.08:0,40,1922	0/0:14,0:14:42.12:0,42,1386	0/0:16,0:16:45.12:0,45,1651	0/0:25,0:25:57.18:0,57,2268	0/0:36,0:36:84.24:0,84,2841	0/0:30,0:30:81.24:0,81,3106	0/0:29,0:29:72.22:0,72,2490	0/0:8,0:8:24.08:0,24,791	0/0:28,0:28:78.19:0,78,2977	0/0:15,0:15:45.13:0,45,1708	0/0:41,0:41:96:0,96,3872	0/0:28,0:28:75.24:0,75,2857	0/0:17,0:17:45.14:0,45,1697	0/0:29,0:29:72.25:0,72,2952	0/0:30,0:30:78.22:0,78,2997	1/1:4,14:17:44.83:605,45,0	1/1:2,9:11:6.02:163,6,0	1/1:6,40:46:20.81:379,21,0	0/0:15,0:15:39.09:0,39,1279	0/0:13,0:13:27.09:0,27,910	0/0:25,0:25:66.17:0,66,2564	0/0:19,0:18:54.19:0,54,2188	0/1:4,15:19:88.11:919,0,88	1/1:2,17:19:20.75:543,21,0	0/0:14,0:14:42.14:0,42,1628
chr10	94693303	.	GGT	G	86.91	PASS	AB=0.811;AC=2;AF=0.036;AN=56;BaseQRankSum=6.499;DP=633;FS=2.052;HRun=0;HaplotypeScore=99.9144;InbreedingCoeff=0.2858;MQ=59.69;MQ0=3;MQRankSum=-5.431;QD=1.70;ReadPosRankSum=1.770;VQSLOD=1.8638;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,20:33:99:154,0,104	0/0:6,0:6:18.06:0,18,356	0/0:25,0:24:71.25:0,71,1296	0/0:25,0:23:65.53:0,66,1176	0/0:14,0:14:39.12:0,39,751	0/0:17,0:17:51.16:0,51,972	0/0:26,0:26:78.27:0,78,1580	0/0:33,0:33:96.32:0,96,1891	0/0:30,0:30:90.31:0,90,1819	0/0:23,0:23:69.22:0,69,1324	0/0:11,0:11:33.08:0,33,583	0/0:28,0:28:84.29:0,84,1656	0/0:19,0:19:57.20:0,57,1154	0/0:39,0:39:99:0,114,2294	0/0:27,0:27:81.25:0,81,1564	0/0:21,0:21:63.22:0,63,1247	0/0:27,0:27:81.28:0,81,1642	0/0:25,0:25:75.24:0,75,1486	0/0:24,0:23:29.07:0,29,654	0/0:13,0:13:14.07:0,14,244	0/0:45,0:45:22.54:0,23,306	0/0:13,0:13:36.12:0,36,723	0/0:11,0:11:30.06:0,30,490	0/0:22,0:22:63.22:0,63,1271	0/0:23,0:22:69.22:0,69,1361	0/0:18,0:18:23.49:0,23,266	0/1:18,0:18:1.94:21,0,2	0/0:17,0:17:51.15:0,51,961
chr10	94695278	.	A	AG	1836.99	PASS	AB=0.958;AC=24;AF=0.429;AN=56;BaseQRankSum=6.038;DP=521;FS=0.875;HRun=0;HaplotypeScore=92.8090;InbreedingCoeff=-0.1767;MQ=43.29;MQ0=44;MQRankSum=2.472;QD=4.63;ReadPosRankSum=4.262;VQSLOD=3.3913;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,1:25:11.62:312,12,0	0/1:13,0:12:29.49:105,0,29	0/0:10,0:5:2.46:0,2,42	0/0:15,0:6:9.82:0,10,75	0/1:22,10:31:99:115,0,205	0/0:12,0:11:17.04:0,17,117	0/1:16,0:16:2.34:2,0,157	0/1:31,0:28:48.14:240,0,48	0/0:12,0:12:9.19:0,9,47	0/1:33,0:32:99:213,0,139	0/1:22,0:20:1.63:160,0,2	0/0:15,0:15:28.11:0,28,252	0/0:17,0:14:28.31:0,28,175	0/1:14,1:14:7.43:7,0,94	1/1:5,0:11:7.49:57,7,0	0/1:9,0:8:23.02:74,0,23	0/0:21,0:15:5.51:0,6,74	0/1:12,0:9:18.97:19,0,63	0/1:25,0:22:87.08:140,0,87	0/1:8,1:15:26.02:40,0,26	0/1:7,0:6:7.30:7,0,24	0/0:22,0:21:30.66:0,31,214	0/1:23,0:21:44.36:44,0,85	0/1:22,0:15:23.66:24,0,66	0/1:24,0:24:47.23:49,0,47	1/1:26,0:23:19.37:220,19,0	0/1:24,0:22:32.73:154,0,33	1/1:7,0:4:5.25:22,5,0
chr10	94695282	.	A	AGAAAGAAAG	6924.21	PASS	AB=0.943;AC=28;AF=0.500;AN=56;BaseQRankSum=-2.289;DP=529;FS=6.105;HRun=0;HaplotypeScore=158.8101;InbreedingCoeff=0.1413;MQ=46.63;MQ0=31;MQRankSum=2.080;QD=17.22;ReadPosRankSum=1.622;VQSLOD=3.8122;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:26:3.34:511,0,3	1/1:13,0:14:13.46:223,13,0	0/0:11,0:6:3.26:0,3,161	0/0:16,0:7:8.27:0,8,213	0/1:28,0:30:19.89:361,0,20	0/0:12,0:11:18.06:0,18,401	0/0:17,0:17:16.98:0,17,585	0/1:35,0:32:99:445,0,122	1/1:4,0:12:0.47:27,0,0	1/1:27,0:28:22.05:870,22,0	1/1:19,0:19:38.18:664,38,0	0/0:16,0:16:21.40:0,21,609	0/0:16,0:14:24.96:0,25,584	0/0:15,0:14:11.19:0,11,415	1/1:9,0:11:14.56:113,15,0	1/1:7,0:8:13.89:105,14,0	0/1:20,0:15:21.65:24,0,22	1/1:10,0:9:18.32:107,18,0	0/1:22,0:20:25.97:497,0,26	0/1:17,1:18:21.25:247,0,21	0/1:7,0:6:3.23:67,0,3	0/0:24,0:23:31.76:0,32,544	0/1:22,0:22:34.21:34,0,346	0/1:19,0:15:26.64:27,0,218	0/1:5,0:24:11.99:201,0,12	1/1:11,14:29:47.87:1312,48,0	0/1:25,2:25:1.42:1003,0,1	0/1:8,0:7:16.22:86,0,16
chr10	94695400	.	T	TCCTCTC	2830.72	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-1.183;DP=529;FS=11.642;HRun=0;HaplotypeScore=118.5879;InbreedingCoeff=0.7547;MQ=72.48;MQ0=1;MQRankSum=-7.931;QD=34.11;ReadPosRankSum=-0.616;VQSLOD=2.8810;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:89.11:0,89,1744	1/1:0,2:2:3.01:99,3,0	0/0:29,0:25:17.50:0,18,358	0/0:42,0:33:0.17:0,0,356	0/0:2,5:7:0.47:0,0,1	0/0:26,0:26:51.17:0,51,1072	0/0:27,0:27:47.49:0,47,1002	0/0:34,0:34:45.01:0,45,774	1/1:5,9:15:21.07:638,21,0	0/0:20,0:20:33.11:0,33,629	0/0:8,0:8:18.06:0,18,379	0/1:14,0:14:24.57:25,0,418	0/0:16,0:16:36.12:0,36,747	0/0:13,0:13:33.07:0,33,647	1/1:6,3:9:6.02:198,6,0	1/1:7,8:14:27.09:869,27,0	0/0:23,0:24:53.44:0,53,1087	1/1:7,8:17:24.08:783,24,0	0/0:16,0:16:27.09:0,27,537	0/0:7,0:7:18.06:0,18,379	0/0:42,0:42:93.32:0,93,1852	0/0:9,0:9:12.04:0,12,249	0/0:11,0:11:27.09:0,27,568	0/0:36,0:35:90.25:0,90,1779	1/1:8,3:11:15.05:393,15,0	0/0:14,0:14:18.06:0,18,379	0/0:20,0:20:36.12:0,36,749	0/0:6,0:6:12.04:0,12,246
chr10	94695551	.	C	CA	1107.46	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.001;DP=656;FS=0.000;HRun=6;HaplotypeScore=67.1286;InbreedingCoeff=0.9945;MQ=66.07;MQ0=0;MQRankSum=0.606;QD=29.93;ReadPosRankSum=2.226;VQSLOD=4.3235;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,35:37:96.31:1202,96,0	0/0:11,0:11:30.03:0,30,297	0/0:22,0:21:50.79:0,51,477	0/0:15,0:14:28.80:0,29,255	0/0:29,0:29:78.17:0,78,795	0/0:27,0:27:75.17:0,75,765	0/0:28,0:28:73.94:0,74,725	0/0:25,0:25:60.12:0,60,611	0/0:20,0:20:57.13:0,57,581	0/0:34,0:34:84.12:0,84,838	0/0:26,0:26:69.15:0,69,698	0/0:25,0:25:69.15:0,69,704	0/0:16,0:16:45.08:0,45,450	0/0:22,0:22:57.11:0,57,573	0/0:20,0:20:51.11:0,51,520	0/0:21,0:21:60.14:0,60,611	0/0:25,0:25:66.12:0,66,665	0/0:33,0:32:93.18:0,93,939	0/0:20,0:20:48.10:0,48,484	0/0:21,0:21:63.14:0,63,643	0/0:23,0:23:66.15:0,66,673	0/0:23,0:23:66.15:0,66,673	0/0:25,0:25:69.15:0,69,703	0/0:26,0:26:63.14:0,63,642	0/0:13,0:12:33.08:0,33,337	0/0:32,0:32:81.12:0,81,809	0/0:30,0:30:78.17:0,78,796	0/0:7,0:7:21.05:0,21,214
chr10	94696126	.	TGCTCTGGATGGC	T	4245.59	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.053;DP=551;FS=3.900;HRun=0;HaplotypeScore=204.2930;InbreedingCoeff=0.8813;MQ=87.55;MQ0=1;MQRankSum=-9.637;QD=51.15;ReadPosRankSum=3.213;VQSLOD=4.6039;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:48.15:0,48,2476	1/1:2,2:4:6.02:210,6,0	0/0:22,0:22:23.10:0,23,661	0/0:20,0:20:32.29:0,32,1315	0/0:2,12:14:0.44:0,0,2	0/0:20,0:20:57.16:0,57,2618	0/0:28,0:28:54.16:0,54,2369	0/0:23,0:23:42.13:0,42,1968	1/1:4,14:18:33.11:1157,33,0	0/0:17,0:17:39.13:0,39,2196	0/0:9,0:9:18.06:0,18,1032	0/0:21,0:21:45.14:0,45,2106	0/0:20,0:20:42.10:0,42,1770	0/0:20,0:20:51.16:0,51,2416	1/1:9,19:28:39.13:1368,39,0	1/1:2,15:17:32.35:1156,32,0	0/0:28,0:28:75.26:0,75,3761	1/1:4,5:9:9.03:249,9,0	0/0:17,0:17:30.05:0,30,1186	0/0:12,0:12:24.08:0,24,1358	0/0:55,0:55:99:0,126,7089	0/0:17,0:17:42.13:0,42,2066	0/0:5,0:5:12.04:0,12,611	0/0:39,0:39:78.25:0,78,3877	1/1:1,6:7:3.01:105,3,0	0/0:27,0:27:66.98:0,67,3468	0/0:24,0:23:57.18:0,57,3002	0/0:5,0:5:12.04:0,12,705
chr10	94697858	.	GGGAAGAAAGGAAGGAA	G	9462.58	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.266;DP=607;FS=19.216;HRun=0;HaplotypeScore=245.2020;InbreedingCoeff=0.9856;MQ=60.71;MQ0=3;MQRankSum=-11.820;QD=58.41;ReadPosRankSum=4.151;VQSLOD=3.0872;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:84.24:0,84,5065	0/0:10,0:10:30.10:0,30,2083	0/0:30,0:9:14.92:0,15,355	0/0:37,0:23:29.88:0,30,1420	0/0:24,0:24:66.20:0,66,4232	1/1:1,22:23:42.14:1898,42,0	1/1:2,22:24:24.08:984,24,0	0/0:20,0:20:51.14:0,51,2359	0/0:17,0:17:42.11:0,42,2228	0/0:24,0:24:66.22:0,66,4349	0/0:9,0:9:24.08:0,24,1642	1/1:1,16:17:21.07:956,21,0	1/1:1,16:17:30.10:1357,30,0	1/1:3,19:22:33.11:1480,33,0	0/0:25,0:25:71.98:0,72,4355	0/0:17,0:17:45.15:0,45,2536	0/0:41,0:41:99:0,111,5936	0/0:25,0:25:66.16:0,66,3645	0/0:19,0:19:45.03:0,45,1588	0/0:14,0:14:36.12:0,36,2557	0/0:15,0:15:45.14:0,45,2886	1/1:1,14:15:35.62:1188,36,0	1/1:2,17:19:33.11:1190,33,0	1/1:6,19:25:9.03:410,9,0	0/0:23,0:23:66.19:0,66,3550	0/0:25,0:25:66.21:0,66,4081	0/0:21,0:21:48.08:0,48,2527	0/0:11,0:11:27.09:0,27,1329
chr10	94697908	.	CAAAG	C	2487.02	PASS	AB=0.994;AC=12;AF=0.214;AN=56;BaseQRankSum=-11.545;DP=686;FS=0.898;HRun=0;HaplotypeScore=199.9525;InbreedingCoeff=0.3677;MQ=65.52;MQ0=3;MQRankSum=-0.567;QD=11.15;ReadPosRankSum=-6.205;VQSLOD=1.6842;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:12,28:40:47.37:789,47,0	0/0:11,0:11:30.09:0,30,495	0/0:23,0:19:28.95:0,29,384	0/0:23,0:23:51.89:0,52,1050	0/0:27,0:27:25.67:0,26,932	0/0:26,0:26:42.14:0,42,630	0/0:24,0:23:36.06:0,36,504	1/1:7,26:33:78.03:1142,78,0	0/0:23,0:23:63.65:0,64,978	0/0:30,0:30:54.28:0,54,1205	0/1:18,0:18:27.84:28,0,545	0/0:20,0:20:33.11:0,33,510	0/0:18,0:18:38.95:0,39,509	0/0:27,0:27:28.97:0,29,694	0/0:26,0:26:41.21:0,41,981	0/0:17,0:17:0.15:0,0,616	0/0:35,0:34:67.73:0,68,1404	0/0:24,0:24:42.13:0,42,898	0/1:18,0:16:23.88:24,0,463	0/0:31,0:31:63.28:0,63,1351	0/0:29,0:29:26.26:0,26,1129	0/1:26,0:26:9.51:10,0,695	0/0:24,0:24:45:0,45,645	0/1:26,1:27:24.95:25,0,475	0/1:24,0:24:61.79:62,0,614	0/0:24,0:24:28.17:0,28,744	0/1:19,0:19:0.79:1,0,702	1/1:1,17:18:33.11:570,33,0
chr10	94698194	.	C	CA	2047.84	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=12.004;DP=710;FS=36.135;HRun=0;HaplotypeScore=105.7964;InbreedingCoeff=0.6972;MQ=70.04;MQ0=0;MQRankSum=-2.248;QD=8.29;ReadPosRankSum=2.931;VQSLOD=1.5534;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,43:45:99:1839,126,0	0/0:6,0:6:18.06:0,18,251	0/0:14,0:14:41.97:0,42,497	0/0:24,0:24:69.11:0,69,882	0/0:25,0:25:60.20:0,60,837	0/1:20,0:20:13.03:16,0,13	0/0:28,0:28:6.24:0,6,21	0/0:34,0:34:99:0,102,1365	0/0:27,0:27:81.16:0,81,1052	0/0:40,0:40:99:0,120,1652	0/0:11,0:11:30.10:0,30,419	0/1:27,0:27:10.82:42,0,11	1/1:28,0:28:17.44:79,17,0	0/1:24,0:24:2.35:2,0,4	0/0:31,0:31:90.30:0,90,1256	0/0:26,0:26:78.18:0,78,1050	1/1:31,0:31:12.61:51,13,0	0/0:10,0:10:30.10:0,30,418	0/0:23,0:23:63.13:0,63,835	0/0:17,0:17:51.12:0,51,688	0/0:29,0:29:78.25:0,78,1071	1/1:19,0:19:5.56:48,6,0	1/1:25,0:25:32.90:125,33,0	1/1:28,0:28:1.76:23,2,0	0/0:30,0:30:89.63:0,90,1200	0/0:33,0:33:90.11:0,90,1210	0/0:42,0:42:99:0,123,1668	0/0:13,0:13:39.13:0,39,544
chr10	94698195	.	G	GA	11634.87	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-9.718;DP=707;FS=4.235;HRun=0;HaplotypeScore=71.4588;InbreedingCoeff=0.9986;MQ=70.06;MQ0=0;MQRankSum=-0.177;QD=42.62;ReadPosRankSum=4.881;VQSLOD=5.3933;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:45,0:45:99:1856,126,0	0/0:6,0:6:18.06:0,18,252	0/0:14,0:14:42.09:0,42,537	0/0:23,0:23:68.97:0,69,854	0/0:24,0:24:60.20:0,60,838	1/1:0,19:19:51.17:815,51,0	1/1:0,28:28:72.25:1151,72,0	0/0:34,0:34:99:0,99,1366	0/0:28,0:28:81.25:0,81,1110	0/0:40,0:40:99:0,120,1671	0/0:11,0:11:30.10:0,30,420	1/1:0,27:27:75.26:1199,75,0	1/1:0,28:28:78.27:1247,78,0	1/1:0,23:23:57.19:911,57,0	0/0:32,0:32:93.30:0,93,1283	0/0:26,0:26:78.26:0,78,1087	1/1:0,31:31:90.31:1438,90,0	0/0:10,0:10:30.10:0,30,419	0/0:23,0:23:66.20:0,66,889	0/0:17,0:17:51.17:0,51,711	0/0:29,0:29:84.25:0,84,1139	1/1:0,19:19:42.14:668,42,0	1/1:0,25:25:72.25:1150,72,0	1/1:0,28:28:75.26:1199,75,0	0/0:30,0:30:90.29:0,90,1241	0/0:33,0:33:87.29:0,87,1213	0/0:41,0:41:99:0,123,1696	0/0:13,0:13:39.13:0,39,545
chr10	94698626	.	G	GT	830.78	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.607;DP=414;FS=0.762;HRun=5;HaplotypeScore=44.9469;InbreedingCoeff=0.9137;MQ=70.44;MQ0=2;MQRankSum=-3.513;QD=30.77;ReadPosRankSum=0.128;VQSLOD=3.6967;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.12:0,57,600	0/0:7,0:7:21.02:0,21,214	0/0:38,0:26:64.64:0,65,635	0/0:34,1:23:46.25:0,46,504	0/0:21,0:21:54.12:0,54,572	0/0:12,0:12:36.08:0,36,378	0/0:18,0:18:51.12:0,51,540	0/0:24,0:24:63.15:0,63,671	0/0:3,0:3:9.02:0,9,96	0/0:9,0:9:24.06:0,24,258	0/0:17,0:17:45.08:0,45,466	0/0:6,0:6:18.05:0,18,193	0/0:9,0:9:21.05:0,21,225	0/0:6,0:6:18.05:0,18,193	0/0:12,0:12:36.07:0,36,377	0/0:9,0:9:27.06:0,27,282	1/1:6,21:27:72.22:926,72,0	0/0:14,0:14:36.09:0,36,386	0/0:21,0:19:51.11:0,51,533	0/0:15,0:15:42.08:0,42,436	0/0:9,0:8:21.05:0,21,224	0/0:8,0:8:24.05:0,24,250	0/0:10,0:10:30.08:0,30,322	0/0:9,0:9:27.07:0,27,290	0/0:11,0:11:30.07:0,30,316	0/0:20,0:20:54.12:0,54,572	0/0:12,0:12:33.07:0,33,346	0/0:12,0:12:36.09:0,36,387
chr10	94698663	.	G	GT	665.74	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.162;DP=470;FS=1.844;HRun=6;HaplotypeScore=50.9469;InbreedingCoeff=0.9391;MQ=69.94;MQ0=1;MQRankSum=-4.532;QD=24.66;ReadPosRankSum=0.394;VQSLOD=3.2198;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.11:0,48,486	0/0:10,0:10:30.07:0,30,306	0/0:23,0:20:47.50:0,47,486	0/0:27,0:21:45:0,45,431	0/0:28,0:28:78.16:0,78,789	0/0:20,0:20:42.09:0,42,428	0/0:17,0:17:42.05:0,42,417	0/0:25,0:25:66.14:0,66,667	0/0:9,0:9:24.05:0,24,245	0/0:19,0:19:57.13:0,57,581	0/0:23,0:23:69.14:0,69,697	0/0:12,0:12:15.03:0,15,153	0/0:10,0:10:18.04:0,18,184	0/0:6,0:6:12.03:0,12,122	0/0:17,0:17:45.10:0,45,459	0/0:7,0:7:21.05:0,21,214	1/1:6,21:27:35.60:760,36,0	0/0:20,0:20:56.98:0,57,558	0/0:16,0:15:39.08:0,39,398	0/0:23,0:23:63.12:0,63,635	0/0:10,0:10:27.06:0,27,275	0/0:11,0:11:27.06:0,27,274	0/0:13,0:13:30.06:0,30,306	0/0:14,0:14:36.07:0,36,362	0/0:10,0:10:30.07:0,30,306	0/0:21,0:21:57.13:0,57,581	0/0:19,0:19:45.09:0,45,459	0/0:15,0:15:45.10:0,45,458
chr10	94698738	.	AT	A	1680.25	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=9.768;DP=457;FS=7.152;HRun=9;HaplotypeScore=55.5113;InbreedingCoeff=0.9447;MQ=75.61;MQ0=3;MQRankSum=1.300;QD=17.32;ReadPosRankSum=3.334;VQSLOD=3.5657;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,29:32:62.01:695,62,0	0/0:7,0:7:18.05:0,18,208	0/0:28,0:17:33.37:0,33,244	0/0:28,0:16:12.40:0,12,119	0/0:23,0:24:62.99:0,63,686	1/1:3,11:14:21.01:192,21,0	1/1:1,7:8:21.01:192,21,0	0/0:32,0:32:90.23:0,90,1005	0/0:5,0:5:15.04:0,15,165	0/0:18,0:18:48.12:0,48,525	0/0:19,0:19:39.06:0,39,425	1/1:2,4:6:3:27,3,0	1/1:0,6:6:12.01:110,12,0	1/1:0,9:9:24.01:220,24,0	0/0:12,0:12:33.09:0,33,371	0/0:10,0:10:27.06:0,27,293	0/0:40,0:40:99:0,114,1267	0/0:21,0:21:54.07:0,54,582	0/0:21,0:20:54.16:0,54,623	0/0:18,0:18:39.49:0,39,468	0/0:12,0:12:30.06:0,30,327	1/1:0,3:3:8.91:66,9,0	1/1:2,7:9:15.01:137,15,0	1/1:1,9:10:27.01:247,27,0	0/0:13,1:14:29.12:0,29,396	0/0:20,0:20:51.14:0,51,581	0/0:21,0:21:57.11:0,57,611	0/0:10,0:10:27.95:0,28,304
chr10	94699844	.	T	TAA	4240.58	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=1.344;DP=564;FS=0.834;HRun=7;HaplotypeScore=114.1069;InbreedingCoeff=0.7922;MQ=67.33;MQ0=2;MQRankSum=-0.383;QD=28.08;ReadPosRankSum=-4.463;VQSLOD=3.4417;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:48.90:0,49,323	0/0:10,0:10:30.06:0,30,336	0/0:16,0:15:32.71:0,33,376	0/1:8,0:7:3.46:3,0,59	0/0:42,0:42:99:0,111,1272	0/0:13,0:13:22.07:0,22,108	0/0:15,0:16:19.04:0,19,142	0/0:25,0:25:1.77:0,2,179	0/0:18,0:18:51.13:0,51,581	1/1:10,10:20:52.38:719,52,0	1/1:4,11:16:27.68:540,28,0	0/0:22,0:22:4.71:0,5,175	0/0:20,0:20:35.11:0,35,182	0/1:12,0:12:19.50:20,0,86	0/0:26,0:26:66.19:0,66,764	0/0:23,0:23:66.19:0,66,767	0/0:30,0:29:56.75:0,57,375	0/0:30,0:30:74.52:0,75,830	1/1:2,12:16:43.79:508,44,0	1/1:4,16:21:54.65:785,55,0	1/1:4,10:15:16.87:261,17,0	0/0:19,0:19:37.92:0,38,210	0/0:27,0:27:39.88:0,40,286	0/0:17,0:17:42.21:0,42,199	0/0:22,0:22:57.11:0,57,629	1/1:8,14:22:48.16:755,48,0	1/1:1,18:20:42.11:649,42,0	0/0:5,0:5:14.60:0,15,82
chr10	94699991	.	G	GA	1030.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.189;DP=526;FS=6.719;HRun=8;HaplotypeScore=64.1246;InbreedingCoeff=0.7466;MQ=54.32;MQ0=17;MQRankSum=1.122;QD=23.97;ReadPosRankSum=1.438;VQSLOD=4.4928;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,37:43:99:1125,99,0	0/0:7,0:7:21.01:0,21,192	0/0:8,0:2:6:0,6,54	0/0:13,1:4:9:0,9,82	0/0:23,0:22:57.03:0,57,522	0/0:14,0:13:24.01:0,24,220	0/0:24,0:25:56.04:0,56,495	0/0:17,0:15:39.02:0,39,357	0/0:11,0:10:24:0,24,214	0/0:25,0:25:57.01:0,57,519	0/0:19,0:18:48.02:0,48,439	0/0:20,0:20:45:0,45,403	0/0:13,0:13:18:0,18,165	0/0:15,0:13:24:0,24,219	0/0:21,0:21:54.03:0,54,494	0/0:17,0:17:39.01:0,39,357	0/0:44,0:44:99:0,114,1041	0/0:17,0:17:38.99:0,39,351	0/0:18,1:18:4.37:0,4,286	0/0:26,0:26:69.03:0,69,631	0/0:19,0:20:42.01:0,42,384	0/0:18,0:18:51.01:0,51,462	0/0:17,0:18:41.94:0,42,384	0/0:23,0:21:45.01:0,45,410	0/0:12,0:12:24:0,24,220	0/0:15,0:14:36.02:0,36,329	0/0:14,0:14:33:0,33,297	0/0:8,0:7:18.01:0,18,165
chr10	94700013	.	AAAAC	A	4455.12	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.854;DP=556;FS=12.414;HRun=0;HaplotypeScore=90.9812;InbreedingCoeff=0.9769;MQ=57.07;MQ0=8;MQRankSum=-0.956;QD=31.37;ReadPosRankSum=3.447;VQSLOD=4.1235;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,111,2405	0/0:7,0:7:18.05:0,18,396	0/0:17,0:6:9.50:0,10,191	0/0:20,0:9:10.34:0,10,312	0/0:21,0:21:57.18:0,57,1355	1/1:3,6:8:15.05:254,15,0	1/1:6,23:29:54.18:912,54,0	0/0:19,0:19:45.14:0,45,895	0/0:12,0:12:33.11:0,33,783	0/0:25,0:25:63.19:0,63,1442	0/0:21,0:21:57.18:0,57,1291	1/1:4,16:20:36.11:601,36,0	1/1:2,9:11:18.06:302,18,0	1/1:1,10:11:21.07:352,21,0	0/0:21,0:21:54.17:0,54,1274	0/0:15,0:15:30.09:0,30,658	0/0:46,0:45:99:0,117,2680	0/0:15,0:15:33.10:0,33,766	0/0:20,0:19:45.09:0,45,983	0/0:24,0:24:57.19:0,57,1248	0/0:24,0:24:64.44:0,64,1462	1/1:4,15:19:42.10:646,42,0	1/1:1,18:19:41.32:677,41,0	1/1:6,18:23:42.14:710,42,0	0/0:12,0:12:33.11:0,33,783	0/0:16,0:16:39.12:0,39,888	0/0:20,0:20:57.19:0,57,1268	0/0:10,0:9:21.07:0,21,519
chr10	94700229	.	C	CA	8506.28	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-13.282;DP=744;FS=1.399;HRun=0;HaplotypeScore=71.5459;InbreedingCoeff=0.9998;MQ=81.03;MQ0=1;MQRankSum=-2.298;QD=44.54;ReadPosRankSum=0.917;VQSLOD=5.0841;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,1850	0/0:11,0:11:33.10:0,33,442	0/0:30,0:30:81.27:0,81,1116	0/0:17,0:17:51.16:0,51,686	0/0:24,0:24:66.19:0,66,885	0/0:21,0:21:60.20:0,60,838	0/0:27,0:27:81.24:0,81,1105	0/0:44,0:44:99:0,129,1777	0/0:27,0:27:78.26:0,78,1085	1/1:2,24:25:75.24:1167,75,0	1/1:0,27:27:69.23:1103,69,0	0/0:31,0:31:90.30:0,90,1258	0/0:27,0:27:75.25:0,75,1041	0/0:27,0:27:75.25:0,75,1048	0/0:27,0:27:78.25:0,78,1073	0/0:21,0:20:57.18:0,57,780	0/0:49,0:49:99:0,141,1954	0/0:35,0:35:99:0,99,1361	1/1:1,23:24:69.24:1104,69,0	1/1:0,19:19:54.18:863,54,0	1/1:0,42:42:99:1823,114,0	0/0:16,0:16:48.16:0,48,658	0/0:13,0:13:39.13:0,39,545	0/0:26,0:26:78.20:0,78,1050	0/0:23,0:23:69.23:0,69,965	1/1:0,25:25:75.26:1199,75,0	1/1:0,28:28:78.27:1247,78,0	0/0:10,0:10:30.10:0,30,419
chr10	94701371	.	TA	T	5996.17	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=10.873;DP=403;FS=6.473;HRun=9;HaplotypeScore=47.7531;InbreedingCoeff=0.8158;MQ=72.87;MQ0=0;MQRankSum=-0.554;QD=20.53;ReadPosRankSum=1.743;VQSLOD=5.2933;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:57.03:521,57,0	1/1:0,5:5:15.01:137,15,0	0/1:8,0:7:3.07:3,0,46	0/1:12,0:7:15.95:16,0,25	1/1:2,16:18:41.94:374,42,0	1/1:5,19:24:60.01:544,60,0	1/1:1,6:7:12.01:110,12,0	1/1:3,36:39:99:949,108,0	1/1:1,9:10:24.01:219,24,0	0/0:15,0:15:36.09:0,36,402	0/0:5,0:5:12.04:0,12,139	1/1:0,9:9:27.01:247,27,0	1/1:0,9:9:24.01:219,24,0	1/1:1,7:8:18.01:164,18,0	1/1:1,8:9:18.01:164,18,0	1/1:2,9:11:21.01:192,21,0	1/1:2,29:31:75.04:685,75,0	1/1:3,19:22:51.02:466,51,0	0/0:17,1:18:20.72:0,21,477	0/0:10,0:10:27.06:0,27,295	0/0:7,0:7:18.03:0,18,188	1/1:0,2:2:6:55,6,0	1/1:0,5:5:15.01:137,15,0	1/1:0,6:6:15.01:137,15,0	1/1:6,22:28:57.03:521,57,0	0/0:19,0:19:48.14:0,48,555	0/0:37,0:37:99:0,102,1136	1/1:0,6:6:15.01:137,15,0
chr10	94701645	.	CATAT	C	79.46	PASS	AB=0.786;AC=2;AF=0.071;AN=28;BaseQRankSum=-1.042;DP=138;FS=0.000;HRun=0;HaplotypeScore=37.8803;InbreedingCoeff=-0.2048;MQ=91.51;MQ0=1;MQRankSum=0.440;QD=4.97;ReadPosRankSum=1.042;VQSLOD=1.3121;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:5,1:6:36.39:42,0,36	./.	0/0:7,0:6:3.01:0,3,54	0/0:25,0:15:7.88:0,8,34	0/0:4,0:4:3.01:0,3,47	./.	./.	0/0:16,0:16:27.09:0,27,421	./.	./.	./.	0/0:5,0:5:3.01:0,3,50	./.	./.	0/0:3,0:3:3.01:0,3,41	0/0:5,0:6:6.02:0,6,144	0/0:13,0:13:3.01:0,3,47	0/1:6,3:10:99:117,0,198	0/0:4,0:4:9.03:0,9,127	./.	0/0:5,0:5:6.01:0,6,91	./.	./.	./.	0/0:3,0:5:3.01:0,3,52	./.	./.	0/0:2,0:4:9.03:0,9,157
chr10	94701863	.	TACACACACAC	T	5958.78	PASS	AB=0.717;AC=30;AF=0.556;AN=54;BaseQRankSum=8.965;DP=438;FS=2.178;HRun=0;HaplotypeScore=130.6140;InbreedingCoeff=0.4912;MQ=59.45;MQ0=8;MQRankSum=-9.350;QD=23.19;ReadPosRankSum=2.016;VQSLOD=4.2412;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:19:6.02:178,6,0	1/1:2,7:9:17.99:540,18,0	./.	0/0:35,0:13:9.03:0,9,265	1/1:2,5:8:18.03:451,18,0	1/1:9,0:12:12.02:126,12,0	0/1:12,0:19:21.88:104,0,22	1/1:27,0:27:6:82,6,0	1/1:7,12:19:30.10:900,30,0	0/0:9,0:10:18.06:0,18,729	0/0:9,0:8:12.04:0,12,545	0/1:6,2:16:40.73:358,0,41	1/1:6,0:14:24.04:238,24,0	0/1:5,0:9:22.66:104,0,23	1/1:8,12:20:33.11:990,33,0	1/1:5,12:18:30.10:880,30,0	0/0:13,0:27:47.53:0,48,1339	0/1:11,5:16:96.39:171,0,96	0/0:11,0:11:12.29:0,12,366	0/0:14,0:14:36.12:0,36,1513	0/0:13,0:14:30.10:0,30,1231	1/1:5,0:12:15.03:149,15,0	0/1:4,0:5:23.77:24,0,37	1/1:13,0:25:17.99:178,18,0	1/1:1,2:4:9.03:250,9,0	0/0:20,0:20:39.12:0,39,1483	0/0:15,0:14:39.11:0,39,1641	0/1:2,2:4:10.63:236,0,11
chr10	94702982	.	CA	C	603.07	PASS	AB=0.646;AC=12;AF=0.214;AN=56;BaseQRankSum=-3.473;DP=590;FS=2.370;HRun=17;HaplotypeScore=143.0142;InbreedingCoeff=0.5808;MQ=68.45;MQ0=3;MQRankSum=7.725;QD=3.92;ReadPosRankSum=6.919;VQSLOD=0.2381;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:32:36.96:0,37,193	0/0:11,0:12:21.66:0,22,123	0/0:33,0:17:13.82:0,14,81	0/0:18,0:15:8.79:0,9,40	0/0:27,0:27:24.06:0,24,112	0/1:9,6:16:28.31:53,0,28	1/1:3,9:17:26.69:118,27,0	0/0:19,0:18:30.67:0,31,172	0/0:24,0:24:35.19:0,35,189	0/0:20,0:19:30.41:0,30,139	0/0:18,0:18:21.48:0,21,100	0/1:5,9:15:5.56:68,0,6	0/1:6,6:13:10.27:42,0,10	1/1:15,5:20:24.14:127,24,0	0/0:23,0:23:40.03:0,40,219	0/0:28,0:28:49.97:0,50,270	0/0:4,0:17:20:0,20,104	0/0:17,0:18:31.88:0,32,184	0/0:20,0:19:36.36:0,36,201	0/0:18,0:17:35.51:0,36,189	0/0:18,0:18:11.49:0,11,52	1/1:9,12:24:8.51:136,9,0	0/1:9,9:21:2.68:73,0,3	1/1:12,12:28:5.01:152,5,0	0/0:25,0:24:48.90:0,49,270	0/0:23,0:23:49:0,49,264	0/0:27,0:36:45.53:0,46,245	0/0:4,0:4:7.73:0,8,43
chr10	94703242	.	TCACACACACACACACACACACA	T	3496.79	PASS	AB=0.794;AC=16;AF=0.296;AN=54;BaseQRankSum=6.256;DP=641;FS=8.019;HRun=0;HaplotypeScore=274.7240;InbreedingCoeff=0.0136;MQ=62.64;MQ0=45;MQRankSum=-6.135;QD=14.33;ReadPosRankSum=-1.702;VQSLOD=1.1266;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:48:36.71:0,37,774	1/1:8,0:6:2.94:18,3,0	0/0:42,0:22:8.86:0,9,60	0/0:61,0:26:5.48:0,5,43	0/1:5,7:11:18.78:19,0,19	0/1:21,0:21:36.02:36,0,1224	0/0:33,0:33:28.45:0,28,903	0/0:22,0:20:0.26:0,0,133	0/1:10,11:20:2.10:509,0,2	0/0:11,0:8:11.75:0,12,84	0/0:7,0:9:3.01:0,3,95	0/0:14,0:14:12.88:0,13,279	0/0:13,0:13:15.05:0,15,764	0/0:15,0:15:12.91:0,13,342	0/1:17,12:27:35.11:1142,0,35	1/1:6,15:22:7.39:1009,7,0	0/1:17,0:30:35.91:54,0,36	1/1:13,0:10:6.02:124,6,0	0/0:19,0:18:17.99:0,18,289	0/1:9,0:8:21.29:21,0,198	0/0:38,0:33:35.87:0,36,469	0/1:24,0:21:73.44:73,0,785	0/1:16,0:16:99:146,0,211	0/0:39,0:39:36.59:0,37,1562	0/1:6,11:16:15.93:338,0,16	0/1:12,0:16:6.17:6,0,351	0/0:13,0:18:14.26:0,14,266	./.
chr10	94703271	.	CACACACACACACA	C	2696.05	PASS	AB=1.000;AC=19;AF=0.352;AN=54;BaseQRankSum=8.007;DP=608;FS=1.110;HRun=0;HaplotypeScore=199.3643;InbreedingCoeff=-0.3962;MQ=39.76;MQ0=51;MQRankSum=-3.137;QD=6.24;ReadPosRankSum=2.023;VQSLOD=2.0817;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:45,0:41:1.77:2,0,632	0/0:7,0:5:6.01:0,6,67	0/0:22,0:3:9.03:0,9,114	0/0:38,0:8:24.08:0,24,303	0/0:14,0:13:6.46:0,6,59	0/1:25,0:25:99:108,0,792	0/1:31,0:31:22.67:23,0,635	1/1:19,0:15:36.11:517,36,0	0/1:15,0:14:99:239,0,165	0/0:14,0:11:24.88:0,25,308	0/0:11,0:9:2.96:0,3,19	0/1:22,0:20:61.21:61,0,391	0/1:21,0:21:2.29:2,0,768	0/1:16,0:16:61.38:61,0,286	0/1:21,0:19:99:491,0,120	0/1:19,0:19:49.57:492,0,50	0/1:32,0:30:99:121,0,378	0/0:12,0:9:26.48:0,26,335	0/0:12,0:11:4.48:0,4,297	0/1:15,0:12:53.41:53,0,252	0/1:51,0:43:72.50:72,0,794	0/1:24,0:18:99:127,0,550	0/1:18,0:16:99:149,0,159	0/0:37,0:36:18.38:0,18,1153	0/1:19,0:18:29.04:163,0,29	0/1:17,0:15:99:112,0,301	0/1:17,0:16:56.42:56,0,210	./.
chr10	94703283	.	CA	C	340.77	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=4.815;DP=578;FS=9.371;HRun=1;HaplotypeScore=144.7778;InbreedingCoeff=0.5819;MQ=45.23;MQ0=41;MQRankSum=-4.945;QD=13.63;ReadPosRankSum=5.212;VQSLOD=2.4671;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:29:22.02:0,22,230	0/0:4,0:3:3.01:0,3,38	0/0:23,0:8:19.61:0,20,231	0/0:34,0:16:42.13:0,42,527	0/0:15,0:14:6.02:0,6,76	0/0:23,0:23:34.07:0,34,344	0/0:25,0:25:22.44:0,22,261	1/1:6,19:15:12.39:427,12,0	0/0:20,0:19:16.78:0,17,257	0/0:9,2:8:21.06:0,21,257	0/0:10,1:9:9.03:0,9,114	0/0:20,0:18:22.32:0,22,146	0/0:19,0:19:33.60:0,34,265	0/0:14,0:14:13.49:0,13,108	0/0:24,0:23:18.12:0,18,296	0/0:24,0:24:9.29:0,9,211	0/0:32,1:31:39.50:0,40,504	0/0:18,0:14:40.86:0,41,460	0/0:16,0:15:27.31:0,27,396	0/0:14,0:12:23.22:0,23,269	0/0:42,1:36:53.12:0,53,748	0/0:21,0:15:28.21:0,28,290	0/0:16,0:14:14.37:0,14,106	0/0:32,0:31:38.31:0,38,453	0/0:22,0:21:6.20:0,6,109	0/0:16,0:14:28.25:0,28,346	0/0:12,2:13:11.23:0,11,143	./.
chr10	94703284	.	A	AATCTGTATG	3388.14	PASS	AB=0.917;AC=10;AF=0.185;AN=54;BaseQRankSum=9.615;DP=587;FS=36.284;HRun=0;HaplotypeScore=232.7533;InbreedingCoeff=-0.0565;MQ=45.35;MQ0=41;MQRankSum=-7.878;QD=16.69;ReadPosRankSum=-1.057;VQSLOD=1.4727;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,1:30:64.24:64,0,113	0/0:4,0:3:3.01:0,3,97	0/0:24,0:8:21.07:0,21,598	0/0:34,0:16:42.14:0,42,1244	0/0:15,0:14:5.76:0,6,143	0/1:19,2:22:99:519,0,595	0/1:23,0:23:99:185,0,395	0/0:24,0:15:39.11:0,39,711	0/0:21,0:20:33.09:0,33,853	0/0:12,0:9:21.07:0,21,671	0/0:11,0:9:9.03:0,9,292	0/1:18,0:18:75.25:621,0,75	0/1:15,2:19:99:1031,0,135	1/1:15,0:15:5.63:373,6,0	0/0:25,0:24:47.75:0,48,1115	0/0:25,0:25:38.47:0,38,891	0/0:33,0:31:50.98:0,51,1364	0/0:18,0:14:42.10:0,42,1257	0/0:17,0:16:39.05:0,39,1003	0/0:11,0:13:30.10:0,30,813	0/0:44,0:37:65.19:0,65,1879	0/1:20,1:16:99:293,0,467	0/1:14,1:14:74.53:210,0,75	0/1:31,2:32:91.57:92,0,690	0/0:22,0:21:15.05:0,15,426	0/0:16,0:14:39.12:0,39,1006	0/0:14,0:13:14.79:0,15,377	./.
chr10	94703285	.	C	CATGA	1407.42	PASS	AB=0.977;AC=10;AF=0.185;AN=54;BaseQRankSum=9.118;DP=577;FS=15.421;HRun=0;HaplotypeScore=162.2237;InbreedingCoeff=-0.0153;MQ=46.16;MQ0=37;MQRankSum=-7.051;QD=7.22;ReadPosRankSum=-0.326;VQSLOD=2.0912;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:26:23.06:129,23,0	0/0:3,0:3:3.01:0,3,53	0/0:25,0:9:20.66:0,21,363	0/0:36,0:18:45.15:0,45,836	0/0:15,0:14:6.02:0,6,118	0/1:21,0:21:99:220,0,208	0/1:21,0:21:68.79:69,0,160	0/0:24,0:15:37.89:0,38,417	0/0:20,0:19:33.08:0,33,522	0/0:12,0:9:27.07:0,27,460	0/0:11,0:9:9.03:0,9,168	0/1:19,1:18:21.67:270,0,22	0/1:17,2:19:77.70:329,0,78	0/1:14,0:14:32.34:99,0,32	0/0:24,0:23:45.02:0,45,693	0/0:24,0:24:38.69:0,39,575	0/0:33,0:31:47.89:0,48,822	0/0:16,0:13:39.10:0,39,688	0/0:18,0:18:49.69:0,50,828	0/0:15,0:13:32.47:0,32,494	0/0:43,0:36:69.22:0,69,1268	0/1:21,1:16:99:117,0,240	0/1:16,0:14:25.83:160,0,26	0/1:33,0:32:99:162,0,456	0/0:22,0:21:15.05:0,15,243	0/0:17,0:15:36.11:0,36,629	0/0:14,0:14:11.73:0,12,193	./.
chr10	94703287	.	C	CATGTGCATGAAT	10665.40	PASS	AB=0.943;AC=11;AF=0.204;AN=54;BaseQRankSum=8.436;DP=624;FS=1.318;HRun=0;HaplotypeScore=265.1858;InbreedingCoeff=0.1598;MQ=46.80;MQ0=34;MQRankSum=-10.320;QD=44.07;ReadPosRankSum=-2.799;VQSLOD=3.7088;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,1:32:54.53:1012,55,0	0/0:2,0:2:3.01:0,3,113	0/0:28,0:12:25.62:0,26,730	0/0:36,0:18:51.17:0,51,1572	0/0:16,0:15:5.60:0,6,205	0/1:26,2:28:99:1413,0,323	0/1:31,0:31:99:1226,0,249	0/0:24,0:16:41.71:0,42,1044	0/0:19,0:19:33.11:0,33,1051	0/0:11,0:9:27.09:0,27,814	0/0:10,0:8:9.03:0,9,341	0/1:22,0:21:49.47:1558,0,49	0/1:23,2:25:88.71:2170,0,89	1/1:19,0:19:30.35:863,30,0	0/0:23,0:23:46.86:0,47,1419	0/0:24,0:24:41.43:0,41,1247	0/0:32,0:31:51.07:0,51,1636	0/0:15,0:12:36.12:0,36,1208	0/0:19,0:18:51.15:0,51,1525	0/0:16,0:14:31.92:0,32,943	0/0:44,0:36:74.53:0,75,2379	0/1:21,1:17:99:649,0,341	0/1:19,1:19:32.54:1035,0,33	0/1:36,2:37:99:739,0,494	0/0:22,0:21:15.05:0,15,524	0/0:17,0:15:39.13:0,39,1200	0/0:16,0:15:25.49:0,25,544	./.
chr10	94704829	.	GGGT	G	6143.89	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=6.930;DP=418;FS=10.648;HRun=0;HaplotypeScore=66.9662;InbreedingCoeff=0.9774;MQ=66.32;MQ0=1;MQRankSum=-2.424;QD=39.90;ReadPosRankSum=3.556;VQSLOD=5.6378;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,29:34:63:1074,63,0	0/0:7,0:7:18.06:0,18,381	0/0:14,0:12:33.11:0,33,740	0/0:18,0:18:38.91:0,39,1031	0/0:12,0:12:36.12:0,36,791	1/1:0,14:14:33.11:563,33,0	1/1:0,14:14:36.12:614,36,0	0/0:16,0:16:45.15:0,45,1005	0/0:8,0:8:24.08:0,24,533	0/0:15,0:15:42.14:0,42,962	0/0:13,0:13:39.13:0,39,900	1/1:2,17:19:54.18:920,54,0	1/1:4,12:16:39.09:634,39,0	1/1:3,11:14:39.13:664,39,0	0/0:11,0:11:33.11:0,33,753	0/0:17,0:17:51.17:0,51,1143	0/0:23,0:23:66.23:0,66,1520	0/0:19,0:19:54.18:0,54,1211	0/0:7,0:7:18.06:0,18,415	0/0:12,0:12:33.11:0,33,760	0/0:31,0:31:69.20:0,69,1517	1/1:2,6:8:15.05:255,15,0	1/1:4,6:10:24.06:347,24,0	1/1:3,22:25:63.22:1074,63,0	0/0:9,0:9:24.08:0,24,553	0/0:12,0:12:27.04:0,27,610	0/0:18,0:18:54.19:0,54,1200	0/0:2,0:2:6.02:0,6,138
chr10	94704831	.	GT	G	1226.21	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.362;DP=403;FS=9.241;HRun=1;HaplotypeScore=65.5512;InbreedingCoeff=0.9763;MQ=66.72;MQ0=1;MQRankSum=-3.473;QD=8.52;ReadPosRankSum=3.424;VQSLOD=0.5796;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,2:31:56.04:234,56,0	0/0:6,0:6:18.04:0,18,253	0/0:14,0:12:33.11:0,33,489	0/0:19,0:19:44.69:0,45,753	0/0:12,0:12:36.11:0,36,527	1/1:14,0:14:29.46:123,29,0	1/1:14,0:14:32.14:134,32,0	0/0:17,0:17:51.15:0,51,726	0/0:8,0:8:24.08:0,24,366	0/0:14,0:14:42.14:0,42,643	0/0:14,0:14:39.13:0,39,597	1/1:18,1:19:48.47:208,48,0	1/1:12,2:14:35.27:157,35,0	1/1:12,1:13:35.20:159,35,0	0/0:11,0:11:33.11:0,33,486	0/0:17,0:17:51.16:0,51,760	0/0:22,0:22:66.22:0,66,1003	0/0:18,0:18:54.15:0,54,801	0/0:7,0:7:18.06:0,18,276	0/0:12,0:12:33.11:0,33,503	0/0:28,0:28:69.14:0,69,984	1/1:6,1:7:13.70:67,14,0	1/1:8,0:8:22.29:122,22,0	1/1:24,0:24:56.31:236,56,0	0/0:9,0:9:24.08:0,24,367	0/0:11,0:11:27.09:0,27,413	0/0:18,0:18:54.18:0,54,821	0/0:2,0:2:6.02:0,6,92
chr10	94705582	.	T	TC	97.23	PASS	AB=0.932;AC=6;AF=0.107;AN=56;BaseQRankSum=5.305;DP=369;FS=1.929;HRun=0;HaplotypeScore=64.2207;InbreedingCoeff=-0.0803;MQ=65.02;MQ0=4;MQRankSum=-2.477;QD=1.33;ReadPosRankSum=-1.429;VQSLOD=0.8995;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.08:0,84,1089	0/0:3,0:3:9.03:0,9,116	0/0:18,0:12:33:0,33,414	0/0:25,0:17:45.59:0,46,595	0/0:13,0:13:36:0,36,421	0/0:16,0:16:42.09:0,42,515	0/0:20,0:19:47.99:0,48,576	0/0:20,0:20:51.24:0,51,234	0/0:12,0:12:26.98:0,27,318	0/1:15,1:16:28.07:28,0,97	0/1:4,2:6:22.58:50,0,23	0/0:3,0:3:8.98:0,9,103	0/0:4,0:4:9.03:0,9,125	0/0:4,0:4:12.03:0,12,150	0/0:7,0:7:14.99:0,15,157	0/0:5,0:5:8.97:0,9,86	0/0:19,0:19:51.17:0,51,711	0/0:19,0:19:51.16:0,51,695	0/0:16,0:16:23.26:0,23,113	0/1:12,0:12:45.39:63,0,45	0/1:27,0:27:46.34:46,0,110	0/0:6,0:6:18.05:0,18,235	0/0:12,0:12:33.10:0,33,439	0/0:21,0:21:51.02:0,51,663	0/0:10,0:10:29.81:0,30,352	0/0:12,0:12:21.06:0,21,109	0/1:8,1:9:19.89:20,0,32	0/1:3,0:3:7.12:13,0,7
chr10	94705726	.	C	CT	1760.69	PASS	AB=0.737;AC=27;AF=0.519;AN=52;BaseQRankSum=1.818;DP=436;FS=0.000;HRun=9;HaplotypeScore=51.9546;InbreedingCoeff=0.7579;MQ=40.84;MQ0=62;MQRankSum=-3.339;QD=8.23;ReadPosRankSum=-0.040;VQSLOD=1.0281;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,10:21:24.49:204,0,24	0/0:5,0:5:7.99:0,8,52	./.	./.	0/0:18,0:17:8.18:0,8,76	1/1:5,3:7:11.87:114,12,0	1/1:8,9:16:7.02:290,7,0	0/0:23,0:21:23.47:0,23,197	0/0:15,0:13:5.67:0,6,140	0/0:23,0:19:32.65:0,33,278	0/0:19,0:18:23.59:0,24,207	1/1:12,6:14:15.04:166,15,0	1/1:2,4:5:6.02:66,6,0	1/1:9,4:12:8.89:82,9,0	0/0:12,0:10:20.98:0,21,182	0/0:5,0:4:2.93:0,3,26	0/0:26,0:22:26.37:0,26,254	0/0:22,0:17:16.73:0,17,164	1/1:18,4:14:15.92:161,16,0	1/1:8,7:14:15.41:144,15,0	1/1:3,3:4:3.01:33,3,0	1/1:7,6:12:10.27:102,10,0	1/1:6,7:11:12.02:124,12,0	1/1:13,6:12:8.94:83,9,0	0/0:13,0:14:13.18:0,13,103	1/1:11,5:14:16.87:169,17,0	1/1:10,9:19:22.36:221,22,0	0/0:23,0:16:26.80:0,27,234
chr10	94706226	.	GAA	G	1456.73	PASS	AB=0.720;AC=17;AF=0.304;AN=56;BaseQRankSum=1.247;DP=571;FS=0.955;HRun=16;HaplotypeScore=85.0088;InbreedingCoeff=0.4607;MQ=76.09;MQ0=1;MQRankSum=0.067;QD=6.59;ReadPosRankSum=4.842;VQSLOD=0.2285;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,2:34:21.38:21,0,226	0/0:7,0:8:18.03:0,18,206	0/0:33,0:23:21.27:0,21,206	0/0:21,0:15:5.06:0,5,38	0/0:24,1:27:32.05:0,32,434	0/0:7,1:17:0.01:0,0,82	0/0:13,2:28:1.15:0,1,264	1/1:18,6:26:21.83:182,22,0	0/0:15,0:15:13.92:0,14,216	1/1:9,11:20:23.77:239,24,0	0/1:10,6:17:29.20:156,0,29	0/0:15,0:19:27.07:0,27,239	0/0:11,0:18:1.58:0,2,96	0/0:11,0:13:22.07:0,22,148	0/0:13,0:17:27.87:0,28,246	0/0:19,0:29:51.37:0,51,519	0/0:19,0:20:52.84:0,53,503	0/0:19,0:27:38.83:0,39,395	1/1:11,11:23:12.73:220,13,0	1/1:11,4:16:4.34:71,4,0	1/1:9,13:24:13.34:269,13,0	0/0:5,0:15:21.93:0,22,87	0/1:11,1:14:41.28:54,0,41	0/0:14,1:25:22.07:0,22,264	0/0:15,1:17:10.15:0,10,258	0/1:7,7:17:1.63:133,0,2	0/1:10,10:20:43.54:143,0,44	1/1:1,7:8:17.90:150,18,0
chr10	94708154	.	AGAGGAGAGGGGGAG	A	30595.07	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=5.668;DP=482;FS=7.658;HRun=0;HaplotypeScore=199.2254;InbreedingCoeff=0.9479;MQ=63.02;MQ0=1;MQRankSum=-8.680;QD=76.68;ReadPosRankSum=5.354;VQSLOD=3.5221;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,4:18:39.04:1023,39,0	1/1:3,5:8:21.07:786,21,0	0/0:40,0:29:70.83:0,71,2671	0/0:29,0:20:42.27:0,42,1917	1/1:0,17:17:36.12:1289,36,0	1/1:6,9:15:33.10:1244,33,0	1/1:4,3:7:21.07:598,21,0	1/1:5,18:23:51.12:1104,51,0	1/1:4,20:24:42.14:1715,42,0	1/1:5,12:17:45.15:1728,45,0	1/1:4,5:9:21.07:824,21,0	1/1:2,16:18:27.09:1119,27,0	1/1:7,12:19:45.15:1700,45,0	1/1:1,18:19:42.14:1740,42,0	1/1:11,15:26:72.21:2334,72,0	1/1:10,10:19:51.17:1645,51,0	0/0:13,0:13:36.12:0,36,1813	1/1:1,16:17:21.07:847,21,0	1/1:2,4:6:18.05:644,18,0	1/1:8,8:16:39.13:1345,39,0	1/1:15,3:19:14.06:679,14,0	1/1:12,9:21:54.16:1681,54,0	1/1:0,15:15:30.10:1242,30,0	1/1:7,7:14:30.06:937,30,0	1/1:9,7:16:48.03:1546,48,0	1/1:2,10:12:33.11:1333,33,0	1/1:0,21:21:30.10:1243,30,0	1/1:0,2:2:6.02:249,6,0
chr10	94708160	.	GA	G	3427.22	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=9.194;DP=457;FS=11.413;HRun=1;HaplotypeScore=187.2738;InbreedingCoeff=0.9350;MQ=61.97;MQ0=1;MQRankSum=-8.841;QD=9.42;ReadPosRankSum=4.097;VQSLOD=0.4054;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,2:17:36.51:181,37,0	1/1:6,1:7:18.22:77,18,0	0/0:45,0:31:61.48:0,61,1008	0/0:34,0:23:31.70:0,32,580	1/1:17,0:17:31.72:141,32,0	1/1:10,1:11:28.41:128,28,0	1/1:6,1:7:19.27:106,19,0	1/1:19,0:19:36.86:238,37,0	1/1:20,0:20:35.38:137,35,0	1/1:13,2:15:38.55:159,39,0	1/1:6,3:9:16.39:70,16,0	1/1:16,0:16:22.64:84,23,0	1/1:14,1:15:38.79:167,39,0	1/1:19,0:19:35.12:130,35,0	1/1:21,3:24:63.23:312,63,0	1/1:16,1:16:42.87:191,43,0	0/0:13,0:13:36.10:0,36,528	1/1:17,0:17:17.93:75,18,0	1/1:5,1:6:15.98:89,16,0	1/1:10,4:14:32.43:139,32,0	1/1:7,8:15:17.28:108,17,0	1/1:16,4:20:47.54:272,48,0	1/1:15,0:15:24.71:94,25,0	1/1:13,0:13:24.90:105,25,0	1/1:12,4:16:40.61:205,41,0	1/1:11,1:12:27.91:111,28,0	1/1:21,0:21:24.88:93,25,0	1/1:2,0:2:4.99:18,5,0
chr10	94708167	.	AG	A	4030.64	PASS	AB=0.883;AC=48;AF=0.857;AN=56;BaseQRankSum=8.801;DP=534;FS=23.926;HRun=5;HaplotypeScore=214.1162;InbreedingCoeff=0.6405;MQ=58.67;MQ0=1;MQRankSum=-8.936;QD=9.33;ReadPosRankSum=3.573;VQSLOD=-0.3407;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,6:20:3.43:160,3,0	1/1:7,0:7:13.36:47,13,0	0/0:48,1:31:61.09:0,61,874	0/0:40,0:26:48.06:0,48,714	1/1:18,2:20:19.44:69,19,0	1/1:11,3:14:32.73:199,33,0	1/1:5,6:11:10.07:127,10,0	0/1:20,0:20:3.89:124,0,4	1/1:22,3:25:48.36:289,48,0	1/1:15,1:16:38.09:179,38,0	1/1:9,3:12:21.96:125,22,0	1/1:16,1:17:25.47:116,25,0	1/1:15,2:17:23.16:163,23,0	1/1:22,2:24:46.96:259,47,0	1/1:20,5:25:44.52:293,45,0	1/1:15,3:17:15.50:209,16,0	0/0:11,0:11:27.09:0,27,400	1/1:18,1:19:21.88:131,22,0	1/1:5,2:7:16.89:113,17,0	1/1:14,3:17:11.26:99,11,0	0/1:16,7:23:13.44:113,0,13	1/1:17,2:19:15.69:105,16,0	1/1:17,0:17:30.76:156,31,0	1/1:11,7:18:17.71:220,18,0	1/1:16,2:18:10.39:113,10,0	1/1:12,5:17:44.21:299,44,0	1/1:21,7:28:43:307,43,0	1/1:3,0:3:4.99:18,5,0
chr10	94708236	.	G	GGA	17844.90	PASS	AB=0.581;AC=49;AF=0.875;AN=56;BaseQRankSum=-8.139;DP=650;FS=5.302;HRun=0;HaplotypeScore=140.1210;InbreedingCoeff=0.8205;MQ=73.81;MQ0=10;MQRankSum=-2.917;QD=33.67;ReadPosRankSum=4.879;VQSLOD=6.7274;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:31:72.25:1214,72,0	1/1:4,6:10:9.02:151,9,0	0/0:43,0:30:9.76:0,10,501	0/0:58,0:32:25.77:0,26,431	1/1:10,14:24:48.13:746,48,0	1/1:6,19:24:47.55:794,48,0	1/1:0,21:21:42.14:707,42,0	1/1:3,27:32:84.21:1287,84,0	1/1:8,14:21:36.12:606,36,0	1/1:5,19:24:57.20:961,57,0	1/1:2,16:18:42.14:707,42,0	1/1:7,9:16:36.11:570,36,0	1/1:4,12:16:39.13:649,39,0	1/1:7,10:18:5.45:446,5,0	1/1:7,23:30:48.16:809,48,0	1/1:5,13:18:33.11:543,33,0	0/0:16,0:16:42.14:0,42,540	1/1:5,10:15:33.11:533,33,0	1/1:5,13:18:39.12:623,39,0	1/1:2,11:14:21.07:354,21,0	1/1:4,26:30:66.23:1112,66,0	0/1:5,13:18:2.54:488,0,3	1/1:6,13:19:42.14:700,42,0	1/1:2,18:18:33.11:556,33,0	1/1:4,18:22:42.14:708,42,0	1/1:5,21:26:63.20:1033,63,0	1/1:3,17:20:51.17:839,51,0	1/1:1,18:19:42.14:708,42,0
chr10	94710228	.	C	CT	1997.93	PASS	AB=0.888;AC=37;AF=0.661;AN=56;BaseQRankSum=1.079;DP=536;FS=8.229;HRun=16;HaplotypeScore=80.0642;InbreedingCoeff=-0.1934;MQ=76.67;MQ0=5;MQRankSum=-0.366;QD=3.93;ReadPosRankSum=0.842;VQSLOD=0.6827;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:4.99:69,5,0	0/1:12,0:13:2.85:69,0,3	0/1:57,0:22:6.09:6,0,25	0/1:47,1:23:3.56:4,0,41	0/1:21,0:21:0.42:79,0,0	1/1:17,0:18:25.61:129,26,0	1/1:11,0:11:20.23:110,20,0	1/1:22,14:37:24.88:265,25,0	0/1:10,0:10:2.52:32,0,3	0/1:14,8:23:3.05:117,0,3	0/1:11,11:22:28.42:119,0,28	0/1:11,0:11:7.35:20,0,7	0/1:8,0:9:7.23:20,0,7	0/1:14,0:14:2.76:66,0,3	1/1:13,0:14:1.05:61,1,0	1/1:9,0:10:4.57:49,5,0	0/0:25,0:27:48.27:0,48,261	1/1:23,0:23:7.20:71,7,0	0/1:14,1:15:1.60:73,0,2	0/1:11,10:23:63.40:91,0,63	0/1:6,0:6:4.82:55,0,5	0/1:6,0:7:0.07:19,0,0	1/1:12,0:14:27.91:143,28,0	1/1:9,0:10:10.43:45,10,0	0/1:19,0:19:5.37:60,0,5	0/1:13,11:25:14.20:158,0,14	0/1:9,5:13:46.04:51,0,46	1/1:4,8:15:6.27:159,6,0
chr10	94710244	.	T	TTAA	3141.51	PASS	AB=0.877;AC=37;AF=0.661;AN=56;BaseQRankSum=-0.209;DP=500;FS=11.125;HRun=0;HaplotypeScore=82.3152;InbreedingCoeff=0.0816;MQ=74.12;MQ0=5;MQRankSum=-1.962;QD=7.39;ReadPosRankSum=-0.308;VQSLOD=1.7586;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:18:4.36:104,4,0	1/1:2,8:13:10.70:301,11,0	0/1:49,0:20:16.81:17,0,260	0/1:42,0:22:10.84:11,0,120	1/1:0,14:19:47.98:642,48,0	1/1:3,0:16:19.31:172,19,0	1/1:0,0:17:20.69:155,21,0	0/1:23,0:23:61.75:62,0,341	1/1:2,6:10:8.06:206,8,0	0/1:19,0:19:12.10:12,0,297	0/1:21,0:21:50.72:51,0,289	0/1:1,0:11:9.88:15,0,10	0/1:2,0:10:7.03:30,0,7	0/1:3,0:13:3.56:95,0,4	1/1:2,16:18:1.60:248,2,0	1/1:5,1:16:18.22:205,18,0	0/0:23,0:23:65.21:0,65,672	1/1:1,15:20:20.77:284,21,0	0/1:14,0:14:27.83:28,0,249	0/0:20,0:20:14.32:0,14,370	0/1:5,0:5:31.84:32,0,66	1/1:8,0:10:1.78:28,2,0	1/1:2,0:15:24.51:146,25,0	1/1:2,0:9:7.74:70,8,0	1/1:1,12:19:10.87:354,11,0	0/1:17,0:17:49.61:50,0,215	0/0:14,0:14:29.65:0,30,345	0/0:18,0:18:43.89:0,44,372
chr10	94710751	.	AT	A	590.48	PASS	AB=0.875;AC=3;AF=0.056;AN=54;BaseQRankSum=6.594;DP=531;FS=1.615;HRun=9;HaplotypeScore=49.1673;InbreedingCoeff=0.6352;MQ=67.70;MQ0=0;MQRankSum=-0.801;QD=17.37;ReadPosRankSum=0.638;VQSLOD=3.5284;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:74.96:676,75,0	0/0:14,0:14:33.07:0,33,361	0/1:6,1:6:19.23:19,0,33	./.	0/0:22,1:23:41.72:0,42,710	0/0:22,0:22:57.17:0,57,658	0/0:12,0:13:32.89:0,33,337	0/0:35,0:35:93.05:0,93,1015	0/0:18,0:18:54.16:0,54,619	0/0:25,0:26:75.05:0,75,840	0/0:19,0:19:48.14:0,48,554	0/0:18,0:18:48.14:0,48,552	0/0:16,0:16:45.10:0,45,495	0/0:16,0:16:42.12:0,42,485	0/0:18,0:18:54.16:0,54,623	0/0:14,0:14:42.07:0,42,460	0/0:25,0:25:72.21:0,72,831	0/0:20,0:20:48.14:0,48,554	0/0:28,0:28:75.21:0,75,857	0/0:25,0:25:69.19:0,69,786	0/0:5,0:5:15.04:0,15,173	0/0:23,0:23:57.17:0,57,658	0/0:16,0:16:45.12:0,45,511	0/0:12,0:12:33.10:0,33,381	0/0:23,0:23:60.18:0,60,693	0/0:34,0:34:99:0,99,1134	0/0:22,0:22:66.20:0,66,762	0/0:8,0:8:15.04:0,15,173
chr10	94712375	.	CGT	C	113.26	PASS	AB=1.000;AC=6;AF=0.250;AN=24;BaseQRankSum=1.157;DP=282;FS=0.000;HRun=0;HaplotypeScore=60.7930;InbreedingCoeff=0.4285;MQ=28.78;MQ0=69;MQRankSum=1.157;QD=1.64;ReadPosRankSum=-1.774;VQSLOD=1.3123;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	0/1:11,0:11:0:0,0,0	0/1:18,0:12:0:0,0,0	./.	0/0:6,0:4:0:0,0,0	./.	./.	0/0:11,0:10:2.92:0,3,20	0/0:10,0:10:3.37:0,3,20	0/0:9,0:8:0:0,0,0	./.	0/0:4,0:2:0:0,0,0	0/0:12,0:14:5.98:0,6,47	1/1:25,2:21:20.66:159,21,0	1/1:11,0:13:5.81:34,6,0	./.	./.	./.	./.	0/0:16,0:10:0:0,0,0	0/0:3,5:7:0:0,0,0	./.	./.	./.
chr10	94712429	.	T	TGTGC	1672.99	PASS	AB=0.932;AC=39;AF=0.813;AN=48;BaseQRankSum=-2.975;DP=336;FS=0.000;HRun=0;HaplotypeScore=86.2823;InbreedingCoeff=0.0772;MQ=39.21;MQ0=35;MQRankSum=2.220;QD=5.31;ReadPosRankSum=-0.206;VQSLOD=1.8418;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:26:26.52:209,27,0	1/1:6,0:6:8.63:45,9,0	./.	0/0:3,0:1:2.84:0,3,14	./.	1/1:14,0:13:8.83:62,9,0	1/1:20,0:18:32.68:252,33,0	0/1:12,0:11:0.86:15,0,1	0/1:11,0:8:8.96:39,0,9	1/1:8,0:6:8.80:61,9,0	0/1:6,0:6:0:0,0,0	1/1:11,0:10:8.64:61,9,0	1/1:10,0:10:11.32:83,11,0	1/1:11,0:10:7.90:43,8,0	1/1:8,0:8:5.99:50,6,0	1/1:12,0:10:11.98:100,12,0	0/1:28,0:24:30.07:30,0,177	0/1:34,0:32:26.14:251,0,26	0/1:8,0:8:7.58:72,0,8	./.	1/1:9,0:3:2.99:24,3,0	1/1:12,0:12:8.99:75,9,0	0/1:1,9:9:0.18:0,0,0	1/1:24,0:22:14.68:115,15,0	1/1:14,0:14:14.98:124,15,0	1/1:10,0:10:8.88:58,9,0	1/1:5,0:5:2.54:20,3,0	./.
chr10	94712961	.	AG	A	8177.89	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.603;DP=715;FS=4.405;HRun=3;HaplotypeScore=119.6135;InbreedingCoeff=0.9999;MQ=87.02;MQ0=0;MQRankSum=-6.131;QD=31.21;ReadPosRankSum=5.046;VQSLOD=4.0795;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,49:54:99:1599,129,0	0/0:13,0:13:36.09:0,36,481	0/0:27,0:27:72.23:0,72,1008	0/0:23,0:23:59.68:0,60,767	0/0:17,0:17:51.17:0,51,734	1/1:0,24:24:66.21:818,66,0	1/1:1,27:28:66.21:818,66,0	0/0:19,0:19:57.19:0,57,820	0/0:28,0:28:81.26:0,81,1143	0/0:32,0:32:96.31:0,96,1339	0/0:15,0:15:42.13:0,42,585	1/1:1,30:31:87.24:1078,87,0	1/1:2,20:22:51.16:630,51,0	1/1:1,34:35:87.23:1078,87,0	0/0:30,0:30:90.30:0,90,1295	0/0:23,0:23:69.22:0,69,976	0/0:34,0:34:93.24:0,93,1276	0/0:38,0:38:99:0,108,1555	0/0:17,0:17:48.15:0,48,672	0/0:22,0:22:63.21:0,63,901	0/0:49,0:49:99:0,144,2055	1/1:1,14:15:36.11:446,36,0	1/1:2,20:22:60.19:743,60,0	1/1:2,29:31:78.25:967,78,0	0/0:16,0:16:44.64:0,45,613	0/0:18,0:18:51.17:0,51,733	0/0:15,0:15:45.15:0,45,648	0/0:17,0:17:51.10:0,51,673
chr10	94715973	.	TCAGAGAGC	T	4190.35	PASS	AB=0.556;AC=9;AF=0.161;AN=56;BaseQRankSum=10.736;DP=603;FS=2.476;HRun=0;HaplotypeScore=154.9798;InbreedingCoeff=0.8569;MQ=92.10;MQ0=0;MQRankSum=-11.531;QD=47.08;ReadPosRankSum=0.985;VQSLOD=3.3645;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,141,5836	0/0:7,0:7:21.07:0,21,894	0/0:29,0:28:49.72:0,50,1665	0/0:32,0:32:63.69:0,64,2228	0/0:18,0:18:42.14:0,42,1783	0/0:19,0:19:48.16:0,48,2057	0/0:29,0:29:87.30:0,87,3602	0/0:25,0:25:60.20:0,60,2378	0/0:16,0:16:45.15:0,45,1821	0/0:24,0:24:60.21:0,60,2518	0/0:8,0:8:24.08:0,24,1021	0/0:23,0:23:63.22:0,63,2621	0/0:23,0:23:66.23:0,66,2737	0/0:24,0:24:69.24:0,69,2835	0/0:15,0:15:39.13:0,39,1595	0/0:15,0:15:42.14:0,42,1723	0/0:42,0:42:99:0,114,4804	0/0:30,0:30:84.29:0,84,3413	1/1:6,10:16:30.10:776,30,0	1/1:2,9:11:15.05:401,15,0	1/1:9,9:18:15.05:387,15,0	0/0:10,0:10:27.09:0,27,1080	0/0:13,0:13:33.11:0,33,1413	0/0:28,0:28:78.27:0,78,3219	0/0:20,0:20:54.19:0,54,2196	0/1:4,16:20:99:1178,0,203	1/1:4,20:24:54.15:1449,54,0	0/0:12,0:12:36.12:0,36,1533
chr10	94716882	.	TA	T	4134.04	PASS	AB=0.872;AC=33;AF=0.589;AN=56;BaseQRankSum=-8.118;DP=592;FS=6.985;HRun=13;HaplotypeScore=90.2648;InbreedingCoeff=0.7628;MQ=71.94;MQ0=0;MQRankSum=1.376;QD=11.17;ReadPosRankSum=4.747;VQSLOD=3.2716;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,30:40:70.91:522,71,0	0/1:3,5:8:37.47:89,0,37	0/1:13,0:13:11.36:11,0,38	0/1:13,0:12:24.04:24,0,38	1/1:12,15:27:18.53:299,19,0	1/1:6,16:22:35.77:263,36,0	1/1:5,18:24:49.67:354,50,0	0/0:14,0:29:52.27:0,52,327	1/1:6,19:26:8.39:252,8,0	0/0:7,0:21:46.59:0,47,296	0/0:5,0:22:51.84:0,52,294	1/1:4,9:15:27.89:187,28,0	1/1:2,8:10:17.88:131,18,0	1/1:3,14:18:34.82:247,35,0	1/1:7,27:34:62.45:459,62,0	1/1:10,8:19:16.89:115,17,0	0/0:24,0:26:52.37:0,52,556	1/1:6,11:17:26.27:196,26,0	0/0:6,0:11:17.42:0,17,104	0/0:8,0:24:41.77:0,42,223	0/0:8,0:20:17.36:0,17,110	1/1:13,16:31:15.63:265,16,0	1/1:2,12:14:26.77:197,27,0	1/1:1,18:19:41.70:302,42,0	1/1:6,13:20:12.95:222,13,0	0/0:8,0:16:23.11:0,23,133	0/0:8,0:27:51.97:0,52,304	0/0:5,0:24:48.61:0,49,266
chr10	94717420	.	CGCCCCTCCTCCCACGTCCTGGTTGCCGGTGATGGAATCACAGGTGTGCA	C	5690.53	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.396;DP=550;FS=0.521;HRun=0;HaplotypeScore=620.3819;InbreedingCoeff=0.9148;MQ=70.48;MQ0=0;MQRankSum=-4.780;QD=50.81;ReadPosRankSum=-2.744;VQSLOD=0.2121;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,16387	0/0:9,0:9:27.09:0,27,2803	0/0:11,0:11:30.10:0,30,1583	0/0:15,0:14:42.14:0,42,1758	0/0:25,0:25:72.25:0,72,10398	0/0:27,0:27:81.28:0,81,12888	0/0:32,0:32:96.30:0,96,11147	1/1:1,0:19:50.55:378,51,0	0/0:21,0:21:63.22:0,63,10404	1/1:0,16:16:27.01:1359,27,0	1/1:0,15:15:6.02:414,6,0	0/0:30,0:30:90.30:0,90,12120	0/0:13,0:13:39.13:0,39,4834	0/0:31,0:31:90.31:0,90,11312	0/0:28,0:28:84.21:0,84,7871	0/0:22,0:22:66.23:0,66,9295	0/0:29,0:29:87.25:0,87,11982	0/0:25,0:25:75.26:0,75,13140	1/1:0,14:14:38.80:1040,39,0	1/1:0,13:13:9.35:414,9,0	1/1:11,0:11:7.29:42,7,0	0/0:19,0:19:52.41:0,52,6767	0/0:16,0:16:48.16:0,48,6278	0/0:28,0:28:84.28:0,84,11678	0/0:14,0:14:42.13:0,42,6134	1/1:0,15:15:20.62:911,21,0	1/1:0,5:5:3.01:377,3,0	1/1:0,4:4:6.02:754,6,0
chr10	94717934	.	TA	T	6483.57	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.058;DP=822;FS=2.277;HRun=1;HaplotypeScore=77.6886;InbreedingCoeff=1.0000;MQ=88.87;MQ0=0;MQRankSum=-8.252;QD=39.29;ReadPosRankSum=4.605;VQSLOD=5.4592;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,2323	1/1:0,14:14:39.13:546,39,0	0/0:35,0:35:99:0,102,1631	0/0:29,0:29:87.27:0,87,1335	1/1:0,18:18:54.18:755,54,0	0/0:17,0:17:51.17:0,51,813	0/0:31,0:31:90.29:0,90,1408	0/0:27,0:27:81.27:0,81,1274	1/1:0,29:29:78.26:1091,78,0	0/0:47,0:47:99:0,141,2225	0/0:22,0:22:66.23:0,66,1055	0/0:39,0:39:99:0,117,1868	0/0:28,0:28:84.29:0,84,1338	0/0:31,0:31:93.32:0,93,1487	1/1:0,36:36:96.32:1343,96,0	1/1:0,28:28:78.26:1091,78,0	0/0:26,0:26:78.27:0,78,1243	1/1:0,26:26:78.23:1070,78,0	0/0:23,0:23:69.18:0,69,1050	0/0:23,0:23:69.24:0,69,1102	0/0:62,0:62:99:0,178,2780	0/0:35,0:35:99:0,105,1655	0/0:21,0:21:63.20:0,63,976	0/0:31,0:31:93.27:0,93,1455	1/1:0,14:14:42.14:588,42,0	0/0:38,0:38:99:0,114,1820	0/0:27,0:27:81.26:0,81,1267	0/0:15,0:15:45.15:0,45,719
chr10	94719626	.	TA	T	4032.04	PASS	AB=0.971;AC=34;AF=0.607;AN=56;BaseQRankSum=10.515;DP=605;FS=7.066;HRun=10;HaplotypeScore=86.9954;InbreedingCoeff=0.6979;MQ=82.54;MQ0=0;MQRankSum=-0.491;QD=10.03;ReadPosRankSum=2.254;VQSLOD=2.6639;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:16:38.03:319,38,0	0/0:10,0:10:24.06:0,24,265	0/0:20,0:20:29.95:0,30,288	0/0:16,0:15:10.68:0,11,118	0/0:31,0:31:81.15:0,81,865	1/1:2,23:25:65.88:573,66,0	1/1:2,14:17:38.03:319,38,0	1/1:24,0:24:0.75:4,1,0	0/0:21,0:21:55.03:0,55,599	0/1:25,0:25:0.49:0,0,35	1/1:19,0:19:3.96:13,4,0	1/1:2,23:25:32.82:514,33,0	1/1:1,15:16:35.99:312,36,0	1/1:1,26:27:59.95:515,60,0	0/0:22,1:23:31.06:0,31,558	0/0:22,1:23:37.07:0,37,612	0/0:39,0:39:99:0,108,1194	0/1:20,3:23:20.99:21,0,462	1/1:20,0:20:2.11:8,2,0	1/1:20,0:20:0.46:4,0,0	0/1:10,0:10:0:2,0,0	1/1:3,21:24:59.79:502,60,0	1/1:4,18:22:21.48:364,21,0	1/1:1,22:23:59.99:521,60,0	0/0:20,0:20:54.08:0,54,554	1/1:29,0:29:9.17:32,9,0	1/1:28,0:28:2.49:9,2,0	0/1:9,0:9:0:1,0,0
chr10	94719635	.	AAC	A	6713.43	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=1.745;DP=612;FS=2.335;HRun=0;HaplotypeScore=90.5463;InbreedingCoeff=0.9877;MQ=72.89;MQ0=0;MQRankSum=0.377;QD=36.49;ReadPosRankSum=-0.427;VQSLOD=6.7547;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:30.12:0,30,183	0/0:9,0:9:27.08:0,27,430	0/0:12,0:12:32.98:0,33,425	0/0:9,0:8:8.97:0,9,123	0/0:30,0:30:87.23:0,87,1366	0/0:24,0:24:66.25:0,66,351	0/0:18,0:18:37.39:0,37,242	1/1:1,27:28:81.17:994,81,0	0/0:25,0:25:50.29:0,50,1032	1/1:2,21:23:63.19:862,63,0	1/1:1,18:19:56.98:686,57,0	0/0:26,0:26:69.34:0,69,406	0/0:20,0:20:49.47:0,49,298	0/0:29,0:29:66.30:0,66,378	0/0:25,0:25:75.02:0,75,1091	0/0:23,0:23:69.08:0,69,1093	0/0:41,0:41:99:0,123,1938	0/0:26,0:26:68.60:0,69,980	1/1:1,22:23:69.15:882,69,0	1/1:0,17:17:51.13:690,51,0	1/1:0,10:10:24.08:335,24,0	0/0:22,0:22:63.59:0,64,353	0/0:27,0:27:72.88:0,73,496	0/0:27,0:27:72.50:0,72,446	0/0:18,0:18:54.16:0,54,874	1/1:0,28:28:84.19:1112,84,0	1/1:1,26:27:69.20:943,69,0	1/1:0,9:9:15.05:209,15,0
chr10	94720310	.	C	CTTTTT	4826.71	PASS	AB=0.888;AC=38;AF=0.679;AN=56;BaseQRankSum=-1.225;DP=538;FS=0.473;HRun=14;HaplotypeScore=118.2195;InbreedingCoeff=0.5774;MQ=69.14;MQ0=1;MQRankSum=0.108;QD=12.38;ReadPosRankSum=-3.186;VQSLOD=1.0627;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,11:21:7.27:151,7,0	1/1:0,0:5:11.93:106,12,0	0/1:16,0:14:4.80:5,0,99	0/0:12,0:9:8.37:0,8,87	1/1:9,0:28:45.96:449,46,0	1/1:26,0:30:59.12:684,59,0	0/1:10,0:25:20.36:90,0,20	0/0:18,0:22:11.46:0,11,330	1/1:2,0:13:10.58:97,11,0	1/1:6,0:25:54.15:836,54,0	1/1:17,0:17:30.28:361,30,0	1/1:4,0:20:5.69:48,6,0	1/1:24,0:27:37.38:507,37,0	1/1:13,0:13:17.98:195,18,0	1/1:2,0:14:8.06:50,8,0	1/1:4,0:14:3.01:32,3,0	0/0:17,0:17:15.68:0,16,175	1/1:9,0:8:21.03:263,21,0	0/0:37,0:37:13.97:0,14,585	0/0:15,0:16:22.10:0,22,224	0/1:11,0:13:18.39:18,0,143	1/1:14,0:19:44.17:380,44,0	1/1:3,0:19:18.39:143,18,0	1/1:13,0:20:34.77:325,35,0	1/1:3,0:13:3.01:31,3,0	0/1:22,0:24:54.50:55,0,351	0/0:18,0:19:22.63:0,23,276	0/0:21,0:24:40.34:0,40,538
chr10	94720368	.	GTGTC	G	2302.79	PASS	AB=0.940;AC=29;AF=0.518;AN=56;BaseQRankSum=-1.351;DP=490;FS=3.721;HRun=0;HaplotypeScore=103.9790;InbreedingCoeff=0.0796;MQ=53.05;MQ0=15;MQRankSum=-3.231;QD=6.40;ReadPosRankSum=-0.343;VQSLOD=2.3780;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,15:22:9.03:169,9,0	0/0:4,0:4:0.47:0,0,1	0/1:34,0:11:57.13:59,0,57	0/1:42,0:21:61.14:90,0,61	1/1:12,0:11:2.57:11,3,0	1/1:5,18:23:29.17:391,29,0	1/1:6,1:7:5.99:77,6,0	0/1:26,0:25:89.09:89,0,206	0/1:16,0:15:31.71:50,0,32	0/1:20,0:19:99:115,0,120	0/1:12,0:12:36.28:36,0,97	1/1:8,2:10:11.95:104,12,0	0/1:3,18:21:17.30:207,0,17	1/1:3,11:14:14.78:218,15,0	0/1:15,0:15:9.15:9,0,108	0/1:14,0:14:5.98:6,0,68	0/0:15,0:15:5.72:0,6,561	0/1:12,0:12:66.79:67,0,166	0/0:25,0:23:2.67:0,3,480	0/0:9,0:9:0.57:0,1,101	0/0:31,0:28:25.49:0,25,342	1/1:9,5:14:29.82:307,30,0	0/1:9,3:11:1.97:197,0,2	1/1:7,19:25:15.02:246,15,0	1/1:8,0:8:3:25,3,0	0/0:21,0:20:13.08:0,13,514	0/0:18,0:18:35.07:0,35,492	0/0:7,0:7:16.33:0,16,183
chr10	94720372	.	C	CTGTG	1650.78	PASS	AB=1.000;AC=27;AF=0.519;AN=52;BaseQRankSum=-5.900;DP=493;FS=6.808;HRun=0;HaplotypeScore=110.8239;InbreedingCoeff=0.5661;MQ=53.58;MQ0=16;MQRankSum=0.427;QD=6.23;ReadPosRankSum=-2.659;VQSLOD=1.4290;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:8.99:0,9,76	./.	0/1:31,0:9:0:0,0,0	0/0:42,0:20:0.47:0,0,1	0/0:9,0:8:2.53:0,3,13	0/0:22,0:22:14.97:0,15,125	0/1:6,0:7:16.73:17,0,19	1/1:26,0:25:9.55:31,10,0	1/1:18,0:17:12:174,12,0	0/0:19,0:19:8.50:0,8,182	0/0:11,0:11:0.56:0,1,106	1/1:9,0:9:0.40:1,0,0	0/0:21,0:21:11.73:0,12,101	0/0:14,0:14:11.98:0,12,99	1/1:15,0:15:16.78:238,17,0	1/1:15,0:15:9.03:162,9,0	0/0:17,0:17:26.91:0,27,313	1/1:12,0:12:8.96:141,9,0	1/1:23,0:21:14.46:175,14,0	1/1:4,5:10:3.01:71,3,0	1/1:18,15:32:7.26:211,7,0	0/0:14,0:14:5.99:0,6,51	0/1:13,0:12:8.99:9,0,57	0/0:24,0:23:11.99:0,12,101	1/1:8,0:8:2.95:25,3,0	1/1:21,0:21:24.41:329,24,0	1/1:7,10:21:14.52:239,15,0	./.
chr10	94720782	.	ATGTTTTTT	A	9486.62	PASS	AB=0.767;AC=36;AF=0.643;AN=56;BaseQRankSum=7.125;DP=359;FS=0.931;HRun=0;HaplotypeScore=107.2167;InbreedingCoeff=0.8090;MQ=71.97;MQ0=2;MQRankSum=-8.176;QD=40.20;ReadPosRankSum=4.386;VQSLOD=4.5221;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,10:21:19.04:980,19,0	0/0:3,0:3:9.03:0,9,223	0/0:14,0:12:35.94:0,36,601	0/1:11,0:9:7.61:8,0,159	0/0:19,0:19:54.02:0,54,1235	1/1:1,0:16:39.13:575,39,0	1/1:0,0:16:27.09:393,27,0	1/1:0,12:12:36.04:552,36,0	0/0:5,0:5:15.05:0,15,394	1/1:0,12:12:29.84:774,30,0	1/1:0,21:21:53.86:1148,54,0	1/1:1,0:18:24.08:358,24,0	1/1:0,0:4:6.02:90,6,0	1/1:0,0:11:30.10:439,30,0	0/0:9,0:9:21.05:0,21,515	0/0:13,0:13:30.08:0,30,708	0/0:27,0:27:78.14:0,78,2357	0/0:20,0:20:48.06:0,48,1464	1/1:5,5:10:30.08:647,30,0	1/1:0,15:15:45.03:1036,45,0	1/1:0,7:7:9.03:224,9,0	0/1:1,0:8:5.08:192,0,5	1/1:0,0:8:14.94:170,15,0	1/1:1,0:11:21.07:307,21,0	0/0:13,0:13:27.09:0,27,625	1/1:0,14:14:42.07:929,42,0	1/1:0,14:14:21.07:578,21,0	1/1:0,3:3:3.01:86,3,0
chr10	94720783	.	TG	T	3935.60	PASS	AB=0.896;AC=40;AF=0.714;AN=56;BaseQRankSum=9.992;DP=358;FS=9.743;HRun=1;HaplotypeScore=86.1597;InbreedingCoeff=0.6683;MQ=72.06;MQ0=2;MQRankSum=-8.562;QD=15.25;ReadPosRankSum=4.803;VQSLOD=2.8244;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:53.59:398,54,0	0/1:3,0:3:0.60:1,0,18	0/0:14,0:12:35.73:0,36,326	0/1:11,0:9:5.18:5,0,109	0/0:19,0:19:38.55:0,39,232	1/1:15,0:15:38.88:309,39,0	1/1:16,0:16:26.87:208,27,0	1/1:12,0:12:35.85:294,36,0	0/0:5,0:5:9.97:0,10,85	1/1:12,0:12:29.92:240,30,0	1/1:21,0:21:53.36:374,53,0	1/1:19,0:18:23.94:193,24,0	1/1:4,0:4:5.99:48,6,0	1/1:11,0:11:29.87:233,30,0	0/1:8,1:9:7.75:8,0,27	0/0:12,0:12:19.26:0,19,118	0/0:28,1:29:42.88:0,43,613	0/0:21,0:21:22.54:0,23,111	1/1:10,0:10:29.94:253,30,0	1/1:15,0:15:44.51:325,45,0	1/1:7,0:7:8.85:58,9,0	1/1:7,1:8:17.98:161,18,0	1/1:8,0:8:14.89:110,15,0	1/1:12,0:11:20.93:164,21,0	0/1:7,6:13:48.68:49,0,67	1/1:14,0:14:41.79:324,42,0	1/1:14,0:14:20.88:159,21,0	1/1:3,0:3:2.99:24,3,0
chr10	94720784	.	GT	G	1149.91	PASS	AB=0.849;AC=49;AF=0.875;AN=56;BaseQRankSum=4.336;DP=366;FS=9.724;HRun=15;HaplotypeScore=98.3385;InbreedingCoeff=0.2257;MQ=70.05;MQ0=8;MQRankSum=-5.157;QD=3.36;ReadPosRankSum=5.034;VQSLOD=0.0232;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:19:1.21:24,1,0	1/1:1,1:3:2.92:19,3,0	0/0:14,0:12:9.63:0,10,104	0/0:10,0:8:1.39:0,1,38	1/1:11,8:20:1.93:121,2,0	1/1:15,0:15:24.90:76,25,0	1/1:16,0:16:15.51:48,16,0	1/1:13,0:12:4.49:15,4,0	0/1:5,0:5:10.47:10,0,31	1/1:12,0:12:17.82:54,18,0	1/1:21,0:21:15.98:51,16,0	1/1:21,0:18:16.30:51,16,0	1/1:4,0:4:4.07:13,4,0	1/1:11,0:11:17.65:54,18,0	1/1:6,5:10:11.72:77,12,0	1/1:3,6:11:13.77:83,14,0	0/1:26,3:30:19.36:19,0,312	0/1:10,13:23:19.22:185,0,19	1/1:9,0:9:10.52:31,11,0	1/1:15,0:15:13.35:50,13,0	1/1:7,0:7:3.59:8,4,0	1/1:8,0:8:12.27:41,12,0	1/1:8,0:8:5.94:18,6,0	1/1:13,0:11:13.11:40,13,0	1/1:11,3:14:15.95:99,16,0	1/1:15,0:14:17.84:54,18,0	1/1:14,0:14:10.32:33,10,0	1/1:3,0:3:2.22:7,2,0
chr10	94720892	.	C	CT	5024.65	PASS	AB=0.706;AC=33;AF=0.589;AN=56;BaseQRankSum=-7.135;DP=462;FS=3.251;HRun=10;HaplotypeScore=50.2433;InbreedingCoeff=0.7514;MQ=59.79;MQ0=5;MQRankSum=-1.899;QD=17.33;ReadPosRankSum=0.757;VQSLOD=5.1452;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,26:35:60.15:637,60,0	0/0:11,0:11:29.96:0,30,246	0/0:23,0:10:18.66:0,19,122	0/0:18,0:9:14.89:0,15,112	0/0:32,0:31:65.64:0,66,529	1/1:2,8:10:22.62:253,23,0	0/1:9,6:14:22.23:188,0,22	1/1:11,13:24:42.50:400,43,0	0/0:9,0:9:17.98:0,18,148	1/1:9,12:21:35.92:366,36,0	1/1:4,8:11:12.03:128,12,0	1/1:4,10:14:27.07:288,27,0	1/1:2,4:5:6.02:64,6,0	1/1:1,8:9:21.05:224,21,0	0/0:2,0:2:5.99:0,6,49	0/0:8,0:8:20.98:0,21,172	0/0:29,0:30:64.95:0,65,522	0/0:29,0:29:65.89:0,66,541	0/1:8,9:17:56.51:266,0,57	1/1:5,12:17:21.05:222,21,0	1/1:3,3:6:9.02:96,9,0	1/1:3,4:7:9.02:96,9,0	1/1:7,6:13:21.04:218,21,0	1/1:8,20:27:29.50:519,29,0	0/0:10,0:10:23.96:0,24,197	1/1:6,16:21:45.11:480,45,0	0/1:8,4:12:1.21:174,0,1	1/1:4,14:19:20.34:406,20,0
chr10	94721032	.	G	GTT	4873.50	PASS	AB=0.586;AC=34;AF=0.607;AN=56;BaseQRankSum=3.262;DP=452;FS=15.119;HRun=9;HaplotypeScore=62.1733;InbreedingCoeff=0.8242;MQ=63.81;MQ0=0;MQRankSum=-1.507;QD=16.24;ReadPosRankSum=0.780;VQSLOD=1.6130;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,2:45:70.90:315,71,0	0/0:2,0:2:6.02:0,6,64	0/0:10,0:12:26.63:0,27,239	0/0:12,0:9:13.20:0,13,167	0/0:11,0:11:21.05:0,21,223	1/1:2,0:16:27.45:94,27,0	1/1:1,1:18:30.46:140,30,0	1/1:8,18:28:56.63:780,57,0	0/0:15,0:15:20.80:0,21,403	1/1:10,0:16:12.86:50,13,0	0/1:4,0:12:36.40:36,0,40	1/1:1,0:19:34.93:120,35,0	1/1:3,0:12:22.46:77,22,0	1/1:4,0:10:17.91:69,18,0	0/0:13,0:13:33.08:0,33,351	0/0:8,0:8:21.05:0,21,224	0/0:39,0:38:99:0,105,1117	0/0:27,0:27:66.09:0,66,690	1/1:5,19:28:65.17:875,65,0	1/1:0,14:16:41.07:545,41,0	1/1:0,7:7:21.07:323,21,0	0/1:2,0:8:11.53:48,0,12	1/1:1,0:8:14.51:49,15,0	1/1:1,0:19:37.43:128,37,0	0/0:12,0:12:28.33:0,28,304	1/1:4,12:17:38.56:486,39,0	1/1:1,13:14:30.10:462,30,0	1/1:1,5:6:18.06:275,18,0
chr10	94722058	.	G	GT	3887.32	PASS	AB=0.526;AC=13;AF=0.232;AN=56;BaseQRankSum=12.684;DP=415;FS=22.360;HRun=1;HaplotypeScore=64.3520;InbreedingCoeff=0.8863;MQ=61.91;MQ0=0;MQRankSum=-1.883;QD=40.49;ReadPosRankSum=0.388;VQSLOD=1.6257;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.32:0,96,1341	0/0:3,0:3:9.03:0,9,126	0/0:18,0:7:19.60:0,20,236	0/0:17,0:11:27.08:0,27,349	0/0:11,0:11:27.09:0,27,378	0/0:19,0:19:57.16:0,57,762	0/0:20,0:20:57.17:0,57,771	1/1:8,14:20:57.19:853,57,0	0/0:15,0:15:45.11:0,45,590	0/0:15,0:15:42.12:0,42,569	0/0:15,0:15:42.14:0,42,586	0/0:16,0:16:48.16:0,48,671	0/0:12,0:12:36.11:0,36,485	0/0:12,0:12:36.12:0,36,503	0/0:14,0:14:42.14:0,42,587	0/0:13,0:13:39.13:0,39,543	0/0:18,0:18:54.16:0,54,731	0/0:14,0:14:36.07:0,36,464	1/1:1,8:9:24.06:357,24,0	1/1:1,10:11:27.09:431,27,0	1/1:0,29:29:78.27:1245,78,0	0/0:8,0:8:21.07:0,21,293	0/0:11,0:11:27.09:0,27,378	0/0:22,0:22:63.21:0,63,881	0/0:13,0:13:39.13:0,39,546	0/1:1,9:10:11.87:392,0,12	1/1:1,10:11:26.88:419,27,0	1/1:0,4:4:12.04:191,12,0
chr10	94722210	.	A	AT	6336.57	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.304;DP=531;FS=2.017;HRun=6;HaplotypeScore=72.5921;InbreedingCoeff=0.9853;MQ=73.73;MQ0=0;MQRankSum=-2.593;QD=30.76;ReadPosRankSum=2.588;VQSLOD=5.5433;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:52.04:626,52,0	0/0:8,0:8:24.05:0,24,245	0/0:9,0:9:27.02:0,27,261	0/0:12,0:12:19.21:0,19,235	0/0:34,0:34:90.04:0,90,916	1/1:0,18:18:54.17:657,54,0	1/1:3,19:22:51.16:615,51,0	0/0:31,0:31:87.16:0,87,877	0/0:13,0:13:27.03:0,27,262	1/1:0,22:22:63.19:756,63,0	1/1:3,19:22:57.09:654,57,0	1/1:1,18:19:39.12:475,39,0	1/1:0,12:12:27.08:332,27,0	1/1:0,15:15:42.13:511,42,0	0/0:17,0:17:45.10:0,45,459	0/0:19,0:19:54.11:0,54,545	0/0:22,0:22:60.13:0,60,612	0/0:20,0:20:57.10:0,57,573	0/0:17,0:17:48.11:0,48,490	0/0:24,0:24:54.12:0,54,551	0/0:13,0:13:27.04:0,27,269	1/1:4,24:28:69.22:844,69,0	1/1:1,15:16:45.12:537,45,0	1/1:1,9:10:27.97:330,28,0	0/0:19,0:19:57.10:0,57,568	0/0:23,2:25:6.97:0,7,629	0/0:29,0:29:87.20:0,87,887	0/0:13,0:13:24.05:0,24,245
chr10	94723437	.	T	TA	5014.84	PASS	AB=0.964;AC=17;AF=0.304;AN=56;BaseQRankSum=-11.375;DP=587;FS=2.080;HRun=8;HaplotypeScore=55.6559;InbreedingCoeff=0.9281;MQ=83.15;MQ0=0;MQRankSum=-0.726;QD=24.11;ReadPosRankSum=2.213;VQSLOD=5.6752;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,34:39:56.81:905,57,0	1/1:2,8:10:21.06:242,21,0	0/1:26,1:26:6.91:7,0,234	0/0:16,0:16:24.59:0,25,202	1/1:2,26:28:78.19:883,78,0	0/0:21,0:20:63.02:0,63,571	0/0:15,0:15:42.02:0,42,384	0/0:27,0:26:47.99:0,48,439	1/1:1,20:21:51.15:588,51,0	0/0:29,0:29:72.01:0,72,654	0/0:20,0:20:48.02:0,48,439	0/0:17,0:17:39:0,39,352	0/0:13,0:13:38.97:0,39,344	0/0:17,0:17:42.01:0,42,384	1/1:3,20:23:57.17:658,57,0	1/1:2,13:15:33.10:381,33,0	0/0:27,0:27:69:0,69,621	1/1:1,13:14:36.11:415,36,0	0/0:12,0:12:36.02:0,36,329	0/0:31,0:31:81.02:0,81,737	0/0:19,0:19:48.02:0,48,439	0/0:25,0:25:62.46:0,62,575	0/0:25,0:25:57.02:0,57,522	0/0:11,0:11:30.02:0,30,275	1/1:2,29:31:81.24:935,81,0	0/0:22,0:22:57.03:0,57,521	0/0:23,0:23:57:0,57,515	0/0:9,0:9:27.01:0,27,247
chr10	94723547	.	CGTGTGT	C	2260.39	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=3.710;DP=595;FS=3.305;HRun=0;HaplotypeScore=143.4969;InbreedingCoeff=0.8109;MQ=62.27;MQ0=13;MQRankSum=-7.057;QD=12.22;ReadPosRankSum=2.164;VQSLOD=2.8216;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,9:40:12.04:245,12,0	0/0:3,0:6:3.01:0,3,36	0/0:34,0:19:9.03:0,9,214	0/0:46,0:26:3.01:0,3,72	0/0:26,0:25:3.20:0,3,66	1/1:14,9:24:15.94:308,16,0	1/1:19,8:27:18.06:347,18,0	0/0:17,0:17:12.03:0,12,200	0/0:14,0:13:9.03:0,9,237	0/0:17,0:20:21.07:0,21,366	0/0:9,0:17:20.20:0,20,312	1/1:5,4:11:15.05:268,15,0	1/1:10,1:12:6.02:103,6,0	1/1:6,6:12:15.05:286,15,0	0/0:20,0:20:12.04:0,12,262	0/0:10,0:16:18.02:0,18,396	0/0:31,0:35:50.35:0,50,1404	0/0:14,0:14:18.03:0,18,453	0/0:20,0:26:33.54:0,34,707	0/0:16,0:24:11.07:0,11,234	0/0:41,0:42:45.11:0,45,1114	1/1:11,7:18:21.07:429,21,0	1/1:10,8:19:15.52:288,16,0	1/1:14,7:21:9.03:184,9,0	0/0:15,0:15:6.02:0,6,195	0/0:10,0:14:26.12:0,26,588	0/0:10,0:15:14.08:0,14,350	0/0:8,0:8:6.02:0,6,147
chr10	94724289	.	GTA	G	18024.75	PASS	AB=0.752;AC=18;AF=0.321;AN=56;BaseQRankSum=16.386;DP=1502;FS=25.512;HRun=0;HaplotypeScore=693.0802;InbreedingCoeff=-0.4739;MQ=40.00;MQ0=33;MQRankSum=-17.292;QD=14.84;ReadPosRankSum=3.671;VQSLOD=2.0249;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:30,18:47:99:542,0,736	0/0:16,0:16:48.16:0,48,921	0/0:35,0:18:36.89:0,37,534	0/0:38,0:16:23.61:0,24,508	0/0:33,0:33:90.19:0,90,1613	0/1:24,11:34:99:548,0,393	0/1:53,25:78:99:1000,0,1102	0/1:67,11:50:99:578,0,683	0/0:37,0:37:99:0,111,1978	0/1:86,57:143:99:2513,0,2199	0/1:25,21:46:99:704,0,418	0/1:57,20:77:99:907,0,1046	0/1:43,27:70:99:996,0,1115	0/1:49,20:69:99:917,0,1132	0/0:32,0:32:96.28:0,96,1723	0/0:27,0:27:72.23:0,72,1343	0/0:26,0:26:76.46:0,76,1367	0/0:17,0:17:46.67:0,47,834	0/1:36,5:28:99:201,0,552	0/1:44,32:76:99:1774,0,495	0/1:42,10:51:99:413,0,766	0/1:66,46:111:99:2024,0,984	0/1:41,46:87:99:1828,0,588	0/1:29,14:43:99:296,0,600	0/0:25,0:25:75.21:0,75,1308	0/1:52,26:77:99:1237,0,1474	0/1:30,20:50:99:894,0,569	0/1:19,13:32:99:652,0,423
chr10	94724308	.	GTA	G	10356.34	PASS	AB=0.852;AC=18;AF=0.321;AN=56;BaseQRankSum=5.757;DP=1507;FS=1.726;HRun=0;HaplotypeScore=729.2765;InbreedingCoeff=-0.4732;MQ=37.62;MQ0=26;MQRankSum=-9.184;QD=8.38;ReadPosRankSum=-4.454;VQSLOD=1.8330;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:41,2:42:99:328,0,282	0/0:12,0:12:36.12:0,36,694	0/0:27,0:8:24.01:0,24,370	0/0:31,0:14:33.51:0,34,546	0/0:28,0:28:81.23:0,81,1449	0/1:27,6:31:99:342,0,419	0/1:56,12:68:99:540,0,450	0/1:71,5:49:17.88:18,0,1448	0/0:40,0:40:99:0,120,2203	0/1:115,29:144:99:1319,0,2839	0/1:44,9:53:99:305,0,421	0/1:69,9:78:99:595,0,1019	0/1:61,14:75:99:689,0,756	0/1:62,11:73:99:749,0,954	0/0:36,0:36:99:0,105,1908	0/0:27,0:27:81.22:0,81,1431	0/0:28,0:28:84.27:0,84,1563	0/0:18,0:18:51.17:0,51,951	0/1:38,5:32:99:124,0,610	0/1:55,25:80:99:893,0,1009	0/1:56,1:56:99:154,0,442	0/1:81,29:109:99:1051,0,1153	0/1:75,20:95:99:907,0,942	0/1:38,6:44:99:300,0,177	0/0:24,0:24:72.25:0,72,1382	0/1:65,19:83:99:768,0,1606	0/1:36,16:52:99:759,0,487	0/1:18,10:28:99:516,0,265
chr10	94724319	.	ATG	A	15617.19	PASS	AB=0.699;AC=18;AF=0.321;AN=56;BaseQRankSum=4.256;DP=1477;FS=11.969;HRun=0;HaplotypeScore=671.2419;InbreedingCoeff=-0.4754;MQ=40.68;MQ0=19;MQRankSum=-13.105;QD=13.07;ReadPosRankSum=-3.821;VQSLOD=2.1544;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,25:48:60.74:564,0,61	0/0:11,0:11:24.05:0,24,247	0/0:29,0:16:13.82:0,14,571	0/0:34,0:19:45.10:0,45,669	0/0:29,0:29:66.15:0,66,691	0/1:18,9:26:99:286,0,243	0/1:25,38:63:99:864,0,268	0/1:57,22:54:99:740,0,129	0/0:42,0:42:99:0,111,1141	0/1:67,69:135:99:2338,0,405	0/1:31,19:50:99:503,0,100	0/1:38,40:78:49.52:1166,0,50	0/1:36,37:73:99:966,0,109	0/1:41,32:73:99:982,0,329	0/0:38,0:38:95.69:0,96,943	0/0:28,0:28:69.14:0,69,692	0/0:28,0:28:69.24:0,69,1164	0/0:15,0:15:42.10:0,42,443	0/1:24,16:34:99:651,0,109	0/1:51,27:78:99:1030,0,293	0/1:30,29:58:99:400,0,324	0/1:65,30:93:99:1166,0,201	0/1:53,35:88:99:1254,0,310	0/1:21,23:44:48.37:433,0,48	0/0:28,0:28:72.15:0,72,729	0/1:42,37:78:99:1241,0,365	0/1:33,20:52:99:569,0,262	0/1:17,14:31:99:467,0,138
chr10	94725161	.	T	TA	4562.81	PASS	AB=0.780;AC=36;AF=0.643;AN=56;BaseQRankSum=1.811;DP=397;FS=0.000;HRun=10;HaplotypeScore=55.6590;InbreedingCoeff=0.8251;MQ=73.63;MQ0=2;MQRankSum=-1.439;QD=17.62;ReadPosRankSum=-0.445;VQSLOD=4.8380;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,29:32:81.20:863,81,0	0/1:3,0:3:0:0,0,0	0/0:21,0:21:22.12:0,22,248	0/0:15,0:13:10.21:0,10,98	0/0:10,0:10:17.94:0,18,144	1/1:0,0:16:36.96:185,37,0	1/1:1,0:17:45.59:229,46,0	1/1:10,19:29:59.31:601,59,0	0/0:12,0:12:32.92:0,33,266	1/1:1,9:10:27.05:274,27,0	1/1:0,4:4:11.90:108,12,0	1/1:1,0:13:22.73:114,23,0	1/1:2,0:6:8.56:43,9,0	1/1:4,0:15:25.60:128,26,0	0/0:19,0:18:41.94:0,42,345	0/0:12,0:10:20.96:0,21,172	0/0:20,0:18:44.89:0,45,364	0/0:16,0:16:21.11:0,21,278	0/1:3,11:12:16.23:244,0,16	1/1:0,3:3:3.01:32,3,0	1/1:0,13:12:27.07:288,27,0	1/1:1,0:4:8.56:43,9,0	1/1:3,0:6:11.56:75,12,0	1/1:0,0:14:28.41:142,28,0	0/0:8,0:7:17.98:0,18,148	1/1:4,18:22:51.11:535,51,0	1/1:4,21:24:53.81:561,54,0	1/1:0,4:4:9.02:96,9,0
chr10	94726081	.	AC	A	4670.63	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=5.736;DP=283;FS=8.048;HRun=1;HaplotypeScore=36.5407;InbreedingCoeff=0.8928;MQ=42.61;MQ0=32;MQRankSum=-3.083;QD=35.12;ReadPosRankSum=-0.486;VQSLOD=3.5449;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:33.07:438,33,0	0/0:6,0:6:17.98:0,18,246	0/0:18,0:2:5.80:0,6,43	0/0:19,0:4:12.01:0,12,143	0/0:12,0:12:32.88:0,33,422	1/1:0,8:7:21.07:293,21,0	1/1:0,10:10:23.99:287,24,0	1/1:0,13:13:39.05:482,39,0	0/0:16,0:15:35.85:0,36,521	1/1:0,5:5:12.04:167,12,0	1/1:1,8:9:23.99:289,24,0	1/1:1,0:1:2.98:21,3,0	1/1:0,3:3:9.03:125,9,0	1/1:0,3:3:6.02:84,6,0	0/0:19,0:19:42.04:0,42,588	0/0:12,0:12:33.01:0,33,454	0/0:16,0:16:45.08:0,45,655	0/0:24,0:24:52.71:0,53,719	1/1:1,9:8:24.03:296,24,0	1/1:1,6:7:21.06:278,21,0	1/1:0,8:8:24.04:313,24,0	1/1:0,5:5:15.01:187,15,0	1/1:0,8:8:24.08:338,24,0	1/1:1,9:10:24.04:313,24,0	0/0:8,0:8:21.07:0,21,318	1/1:1,8:9:27.08:360,27,0	1/1:0,2:2:3.01:42,3,0	1/1:1,8:9:27.07:358,27,0
chr10	94726137	.	A	AAAC	6494.45	PASS	AB=1.000;AC=37;AF=0.685;AN=54;BaseQRankSum=11.104;DP=332;FS=8.578;HRun=0;HaplotypeScore=59.8557;InbreedingCoeff=0.8830;MQ=45.72;MQ0=28;MQRankSum=-1.353;QD=33.30;ReadPosRankSum=-1.198;VQSLOD=4.0758;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,7:15:29.84:497,30,0	0/0:8,0:7:18.05:0,18,282	./.	0/1:18,0:5:3.26:3,0,54	0/0:10,0:10:30.10:0,30,486	1/1:1,6:9:21.04:422,21,0	1/1:4,1:5:8.96:110,9,0	1/1:12,2:12:26.15:369,26,0	0/0:14,0:13:27.04:0,27,393	1/1:5,2:7:11.41:143,11,0	1/1:4,6:10:29.76:514,30,0	1/1:1,5:6:9.02:201,9,0	1/1:4,3:7:14.75:227,15,0	1/1:4,0:4:5.99:60,6,0	0/0:26,0:26:66.22:0,66,1052	0/0:9,0:9:23.87:0,24,383	0/0:24,0:24:57.17:0,57,901	0/0:25,0:25:60.17:0,60,952	1/1:8,3:7:17.83:279,18,0	1/1:3,11:13:32.94:639,33,0	1/1:3,4:7:15.01:290,15,0	1/1:2,4:7:14.87:282,15,0	1/1:5,3:8:17.76:211,18,0	1/1:4,10:14:33.03:537,33,0	0/0:4,0:4:12.04:0,12,205	1/1:3,9:14:38.60:639,39,0	1/1:4,5:9:23.81:402,24,0	1/1:2,11:13:30.10:671,30,0
chr10	94726142	.	AC	A	3172.65	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=10.854;DP=324;FS=6.272;HRun=1;HaplotypeScore=56.0696;InbreedingCoeff=0.8512;MQ=50.14;MQ0=25;MQRankSum=-2.383;QD=17.24;ReadPosRankSum=-0.923;VQSLOD=3.2925;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,3:13:1.49:205,1,0	0/0:7,0:6:15.05:0,15,213	1/1:17,1:3:1.55:4,2,0	0/0:17,2:7:1.49:0,1,75	0/0:11,0:11:33.09:0,33,450	1/1:8,1:9:20.49:148,20,0	1/1:4,2:6:14.97:152,15,0	1/1:4,8:10:6.97:229,7,0	0/0:14,0:13:26.86:0,27,344	1/1:3,4:7:17.70:166,18,0	1/1:7,3:10:29.43:267,29,0	1/1:7,0:6:11.63:70,12,0	1/1:3,4:7:14.24:134,14,0	1/1:0,5:5:6.02:83,6,0	0/0:29,0:29:75.21:0,75,1016	0/0:9,0:9:24.08:0,24,332	0/0:23,0:23:60:0,60,777	0/0:24,0:24:54.12:0,54,724	1/1:8,3:7:17.09:150,17,0	1/1:11,1:11:32.47:254,32,0	1/1:4,1:5:14.89:123,15,0	1/1:6,1:7:17.62:141,18,0	1/1:5,1:6:15.42:150,15,0	1/1:10,4:14:35.21:314,35,0	0/0:4,0:4:12.04:0,12,171	1/1:12,2:14:41.35:376,41,0	1/1:5,4:9:23.60:212,24,0	1/1:11,0:11:29.59:199,30,0
chr10	94726542	.	T	TACACACAC	6230.55	PASS	AB=0.918;AC=33;AF=0.589;AN=56;BaseQRankSum=0.378;DP=729;FS=19.661;HRun=0;HaplotypeScore=202.7484;InbreedingCoeff=0.6819;MQ=66.66;MQ0=7;MQRankSum=-7.829;QD=13.20;ReadPosRankSum=-3.755;VQSLOD=2.0360;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:46:74.23:0,74,1696	1/1:1,1:12:12.03:175,12,0	0/1:39,0:25:6.42:6,0,12	0/1:41,0:25:13:13,0,53	1/1:11,2:27:12.04:186,12,0	0/0:20,0:24:35.78:0,36,933	0/0:25,0:26:41.17:0,41,933	1/1:36,0:36:18.35:908,18,0	1/1:12,8:25:3.01:51,3,0	1/1:7,0:25:23.67:257,24,0	0/1:4,6:13:0.14:0,0,0	0/0:25,0:25:20.64:0,21,938	0/1:23,0:24:0.80:1,0,778	0/0:19,0:23:27.09:0,27,615	1/1:5,14:23:21.07:462,21,0	1/1:8,8:20:18.06:518,18,0	0/0:27,0:29:51.14:0,51,1181	0/1:13,0:13:2.93:198,0,3	1/1:19,0:33:45.04:1064,45,0	1/1:5,0:14:9.03:162,9,0	1/1:41,0:40:20.94:244,21,0	0/0:17,0:17:32.76:0,33,626	0/0:20,0:22:40.04:0,40,882	0/0:42,0:45:86.32:0,86,1985	1/1:9,9:24:2.49:149,2,0	1/1:11,0:33:44.02:786,44,0	1/1:17,1:21:36.10:875,36,0	1/1:4,0:4:9:174,9,0
chr10	94726700	.	A	AT	20944.60	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=12.186;DP=699;FS=3.441;HRun=0;HaplotypeScore=92.2299;InbreedingCoeff=0.9996;MQ=67.47;MQ0=0;MQRankSum=-2.999;QD=43.91;ReadPosRankSum=0.682;VQSLOD=5.0154;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:99:1762,111,0	0/0:8,0:8:24.07:0,24,313	0/0:25,0:22:59.40:0,59,750	0/0:12,0:11:30.08:0,30,382	0/0:34,0:34:99:0,99,1317	1/1:0,16:16:48.16:766,48,0	1/1:2,14:16:42.14:671,42,0	1/1:1,34:35:99:1531,99,0	0/0:22,0:22:63.21:0,63,880	1/1:1,37:38:99:1746,111,0	1/1:0,24:24:66.23:1055,66,0	1/1:2,21:23:57.19:910,57,0	1/1:0,28:28:69.21:1101,69,0	1/1:0,16:17:48.16:759,48,0	0/0:20,0:20:60.20:0,60,837	0/0:22,0:22:66.22:0,66,922	0/0:31,0:31:90.27:0,90,1220	0/0:20,0:20:60.18:0,60,819	1/1:0,29:29:84.24:1273,84,0	1/1:1,26:27:75.26:1198,75,0	1/1:0,13:13:39.13:621,39,0	1/1:0,25:25:75.26:1198,75,0	1/1:1,25:26:65.90:1054,66,0	1/1:0,30:30:84.29:1341,84,0	0/0:28,0:28:81.27:0,81,1131	1/1:1,40:41:99:1759,114,0	1/1:0,26:25:78.27:1244,78,0	1/1:1,23:24:57.88:955,58,0
chr10	94727020	.	C	CT	18478.51	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-14.881;DP=658;FS=3.640;HRun=1;HaplotypeScore=61.7145;InbreedingCoeff=0.9985;MQ=86.21;MQ0=0;MQRankSum=-4.575;QD=41.52;ReadPosRankSum=1.919;VQSLOD=5.5171;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:39:99:1574,105,0	0/0:6,0:6:18.06:0,18,234	0/0:24,0:24:69.22:0,69,883	0/0:27,0:27:76.96:0,77,989	0/0:27,0:27:78.25:0,78,1013	1/1:1,17:18:48.16:719,48,0	1/1:1,25:26:72.24:1079,72,0	1/1:0,30:30:90.28:1307,90,0	0/0:18,0:18:54.18:0,54,701	1/1:0,18:18:54.18:804,54,0	1/1:0,21:21:60.20:899,60,0	1/1:1,17:18:51.17:765,51,0	1/1:1,24:25:72.22:1056,72,0	1/1:1,19:20:51.17:764,51,0	0/0:28,0:28:84.26:0,84,1076	0/0:19,0:19:57.19:0,57,740	0/0:27,0:27:78.25:0,78,1013	0/0:22,0:22:66.21:0,66,856	1/1:1,18:19:57.16:807,57,0	1/1:0,16:16:48.16:719,48,0	1/1:1,30:31:84.28:1259,84,0	1/1:0,22:22:60.20:899,60,0	1/1:0,18:18:48.16:719,48,0	1/1:1,43:44:99:1799,120,0	0/0:15,0:15:45.15:0,45,584	1/1:0,38:38:99:1689,114,0	1/1:1,29:30:84.28:1259,84,0	1/1:2,10:12:24.08:360,24,0
chr10	94727297	.	ATG	A	11652.42	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=13.558;DP=476;FS=4.765;HRun=0;HaplotypeScore=83.7928;InbreedingCoeff=0.9867;MQ=67.46;MQ0=0;MQRankSum=-1.607;QD=35.53;ReadPosRankSum=0.659;VQSLOD=7.1765;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:69.23:969,69,0	0/0:7,0:7:18.06:0,18,330	0/0:8,0:8:21.04:0,21,348	0/0:7,0:7:20.89:0,21,290	0/0:23,0:23:63.22:0,63,1147	1/1:1,24:25:60.20:859,60,0	1/1:2,9:11:21.07:301,21,0	1/1:1,25:26:75.24:1047,75,0	0/0:13,0:13:39.13:0,39,714	1/1:0,19:18:50.77:686,51,0	1/1:0,4:4:9.03:129,9,0	1/1:0,24:24:66.15:919,66,0	1/1:0,21:21:54.05:773,54,0	1/1:1,13:14:39.13:558,39,0	0/0:15,0:15:42.14:0,42,756	0/0:16,0:16:48.16:0,48,880	0/0:23,0:23:66.23:0,66,1209	0/0:14,0:14:42.14:0,42,732	1/1:1,8:9:24.08:343,24,0	1/1:1,22:23:63.14:876,63,0	1/1:0,13:13:33.11:473,33,0	1/1:3,22:25:60.20:856,60,0	1/1:1,16:17:39.13:558,39,0	1/1:1,17:18:39.05:532,39,0	0/0:22,0:22:63.22:0,63,1146	1/1:1,21:22:60.15:811,60,0	1/1:2,21:23:50.93:729,51,0	1/1:0,6:6:17.99:233,18,0
chr10	94727471	.	GA	G	7729.34	PASS	AB=0.584;AC=48;AF=0.857;AN=56;BaseQRankSum=1.914;DP=505;FS=5.645;HRun=11;HaplotypeScore=52.1560;InbreedingCoeff=0.5457;MQ=57.27;MQ0=10;MQRankSum=-0.062;QD=17.21;ReadPosRankSum=2.075;VQSLOD=5.8174;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:31:50.12:596,50,0	1/1:1,3:4:2.98:25,3,0	0/0:17,0:6:9.01:0,9,88	0/0:14,0:6:6.01:0,6,57	1/1:8,18:24:53.13:425,53,0	1/1:6,20:26:55.94:449,56,0	1/1:3,16:19:44.92:369,45,0	1/1:4,17:21:18.88:355,19,0	1/1:3,8:12:26.01:203,26,0	1/1:5,12:16:29.94:244,30,0	1/1:6,8:13:21.81:175,22,0	1/1:1,15:16:41.95:345,42,0	1/1:3,13:16:3.83:239,4,0	1/1:2,11:13:23.96:197,24,0	1/1:3,14:16:38.94:320,39,0	1/1:1,9:10:23.97:197,24,0	0/0:18,2:23:7.34:0,7,433	1/1:2,13:15:35.95:295,36,0	1/1:4,17:19:50.72:418,51,0	1/1:8,14:22:18.93:361,19,0	0/1:4,17:21:42.02:316,0,42	1/1:4,10:14:29.95:246,30,0	1/1:2,14:16:38.95:320,39,0	1/1:6,15:21:11.72:331,12,0	0/1:6,10:16:36.99:145,0,37	1/1:3,14:17:41.95:345,42,0	1/1:3,17:20:47.93:394,48,0	1/1:5,17:22:50.93:419,51,0
chr10	94730289	.	CTCAGGG	C	11960.79	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.765;DP=599;FS=5.752;HRun=0;HaplotypeScore=175.7131;InbreedingCoeff=0.9681;MQ=72.38;MQ0=0;MQRankSum=-17.950;QD=54.87;ReadPosRankSum=-0.253;VQSLOD=4.4404;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,21:26:51.18:1201,51,0	0/0:15,0:15:45.15:0,45,1599	0/0:13,0:13:36.12:0,36,1175	0/0:13,0:13:33.58:0,34,910	0/0:15,0:15:45.15:0,45,1598	1/1:2,22:24:63.22:1473,63,0	1/1:5,25:30:66.23:1558,66,0	0/0:30,0:30:81.27:0,81,2472	0/0:23,0:23:66.23:0,66,2292	1/1:4,21:25:69.15:1417,69,0	1/1:2,12:14:36.12:847,36,0	1/1:3,23:26:66.06:1558,66,0	1/1:2,11:13:33.11:779,33,0	1/1:0,17:17:42.14:957,42,0	0/0:27,0:27:81.27:0,81,2736	0/0:9,0:9:27.09:0,27,961	0/0:31,0:31:75.26:0,75,2607	0/0:35,0:35:99:0,102,3500	0/0:26,0:26:69.24:0,69,2288	0/0:18,0:18:51.18:0,51,1799	0/0:55,0:55:99:0,150,4854	1/1:0,12:12:27.09:637,27,0	1/1:0,15:15:39.13:909,39,0	1/1:1,15:16:27.03:625,27,0	0/0:19,0:19:48.15:0,48,1612	0/0:24,1:25:1.38:0,1,2326	0/0:16,0:16:48.16:0,48,1593	0/0:11,0:11:33.11:0,33,1091
chr10	94731390	.	TTGGCTTGGCCTAAGGAG	T	32301.47	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=10.091;DP=480;FS=54.839;HRun=0;HaplotypeScore=214.5402;InbreedingCoeff=0.9290;MQ=86.49;MQ0=0;MQRankSum=-12.697;QD=81.57;ReadPosRankSum=4.467;VQSLOD=2.5685;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:33:45.15:2213,45,0	1/1:0,18:18:30.10:1489,30,0	0/0:27,0:27:78.08:0,78,3931	0/0:20,0:20:54.16:0,54,3048	1/1:1,20:21:21.07:824,21,0	1/1:0,9:9:18.06:894,18,0	1/1:0,22:22:39.13:1879,39,0	1/1:0,23:23:68.82:1470,69,0	1/1:0,12:12:30.10:1489,30,0	1/1:0,18:18:48:1870,48,0	1/1:2,13:15:15.05:745,15,0	1/1:0,15:15:27.09:1320,27,0	1/1:1,14:15:23.85:1191,24,0	1/1:1,8:9:24.08:1189,24,0	1/1:0,15:15:33.11:1638,33,0	1/1:0,15:15:36.12:1785,36,0	0/0:37,0:37:99:0,102,7740	1/1:1,13:14:15.05:744,15,0	1/1:1,8:9:24.07:659,24,0	1/1:0,10:10:12.04:596,12,0	1/1:4,25:29:36.12:1731,36,0	1/1:0,18:18:27.09:1340,27,0	1/1:0,12:12:21.54:953,22,0	1/1:1,13:14:15.05:744,15,0	1/1:1,12:13:24.08:1191,24,0	1/1:0,15:15:42.09:1953,42,0	1/1:0,19:19:44.89:2097,45,0	1/1:0,3:3:6.02:298,6,0
chr10	94731525	.	C	CCAGACAGACAGA	21128.20	PASS	AB=0.542;AC=49;AF=0.875;AN=56;BaseQRankSum=-1.698;DP=634;FS=6.392;HRun=0;HaplotypeScore=225.5949;InbreedingCoeff=0.6306;MQ=58.82;MQ0=2;MQRankSum=-9.237;QD=37.80;ReadPosRankSum=-2.524;VQSLOD=3.5781;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:39:9.90:10,0,44	1/1:5,3:9:9.50:526,10,0	0/0:29,0:25:2.98:0,3,103	0/0:17,0:12:11.15:0,11,360	1/1:14,5:20:14.75:819,15,0	1/1:9,3:14:9.03:473,9,0	1/1:21,5:28:15.05:771,15,0	1/1:41,0:39:39.11:1308,39,0	1/1:17,0:17:6.02:190,6,0	1/1:22,0:28:33.10:1460,33,0	1/1:21,0:22:8.70:358,9,0	1/1:19,7:26:27.09:1463,27,0	1/1:9,3:15:9.03:494,9,0	1/1:9,9:20:30.10:1728,30,0	1/1:10,6:18:18.06:1041,18,0	1/1:14,4:19:18.06:995,18,0	0/0:29,0:29:63.22:0,63,1875	1/1:13,3:18:15.05:831,15,0	1/1:28,0:26:39.22:934,39,0	1/1:22,0:22:18.06:649,18,0	1/1:20,0:19:8.01:264,8,0	1/1:21,7:30:33.11:1840,33,0	1/1:13,5:18:17.67:969,18,0	1/1:19,7:28:5.73:338,6,0	1/1:3,12:15:21.07:1218,21,0	1/1:28,0:28:20.10:579,20,0	1/1:23,0:23:18.06:645,18,0	1/1:5,0:12:24.08:1224,24,0
chr10	94733794	.	GC	G	3672.41	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=10.171;DP=412;FS=1.362;HRun=5;HaplotypeScore=41.7294;InbreedingCoeff=0.9463;MQ=84.10;MQ0=0;MQRankSum=-0.387;QD=26.05;ReadPosRankSum=3.733;VQSLOD=2.8956;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:22:45.13:510,45,0	0/0:9,0:9:24.06:0,24,310	0/0:15,0:15:35.84:0,36,439	0/0:12,0:12:23.88:0,24,258	0/0:8,0:8:21.06:0,21,269	1/1:0,18:18:51.15:578,51,0	1/1:1,15:16:39.11:442,39,0	0/0:22,0:22:66.18:0,66,866	0/0:13,0:13:36.11:0,36,475	1/1:0,10:10:24:256,24,0	1/1:0,2:2:5.98:54,6,0	1/1:1,15:16:39.11:440,39,0	1/1:2,5:7:15.04:169,15,0	1/1:1,16:17:39.11:442,39,0	0/0:13,0:13:39.13:0,39,532	0/0:14,0:14:39.12:0,39,518	0/0:29,0:29:84.19:0,84,1079	0/0:20,0:20:57.17:0,57,761	0/0:16,0:16:45.13:0,45,584	0/0:6,0:6:18.04:0,18,212	0/0:43,0:43:99:0,123,1628	1/1:0,7:7:12.03:136,12,0	1/1:0,4:4:9.03:102,9,0	1/1:3,19:22:48.14:544,48,0	0/0:9,0:9:27.07:0,27,338	0/0:16,2:18:4.22:0,4,592	0/0:12,0:12:33.07:0,33,403	0/0:12,0:12:36.11:0,36,474
chr10	94735826	.	AGTGTGTGTGTGT	A	3226.07	PASS	AB=0.750;AC=16;AF=0.286;AN=56;BaseQRankSum=3.948;DP=627;FS=0.000;HRun=0;HaplotypeScore=204.5257;InbreedingCoeff=0.6675;MQ=62.21;MQ0=8;MQRankSum=-6.386;QD=18.23;ReadPosRankSum=1.358;VQSLOD=2.4118;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:28:39.57:0,40,1528	0/0:2,0:6:6.02:0,6,232	0/0:27,0:18:6.02:0,6,124	0/0:29,0:16:3.01:0,3,80	0/0:30,0:30:39.11:0,39,1275	0/1:12,7:18:25.41:240,0,25	0/1:14,6:20:37.66:97,0,38	0/0:20,0:20:12.04:0,12,270	0/0:20,0:30:22.89:0,23,869	0/0:16,0:16:15.05:0,15,674	0/0:13,0:16:18.06:0,18,675	1/1:10,8:19:18.06:619,18,0	1/1:10,7:18:24.08:786,24,0	1/1:14,6:22:21.07:657,21,0	0/0:14,0:28:42.14:0,42,1929	0/0:10,0:22:17.60:0,18,787	0/0:27,0:30:49.05:0,49,2270	0/0:19,0:31:35.48:0,35,1536	0/0:23,0:25:22.10:0,22,515	0/0:10,0:13:9.03:0,9,128	0/0:31,0:39:15.02:0,15,233	1/1:7,8:15:21.03:639,21,0	1/1:11,4:15:2.94:103,3,0	1/1:25,11:37:8.92:259,9,0	0/0:13,0:20:17.42:0,17,691	0/0:14,0:18:26.92:0,27,334	0/0:10,0:16:27.09:0,27,414	1/1:5,0:10:3.11:7,3,0
chr10	94736168	.	TTTTC	T	8750.42	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=3.549;DP=733;FS=12.743;HRun=0;HaplotypeScore=143.8725;InbreedingCoeff=0.9936;MQ=65.10;MQ0=1;MQRankSum=2.778;QD=28.69;ReadPosRankSum=2.594;VQSLOD=4.4622;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,43:53:84.29:1376,84,0	0/0:10,0:9:18.06:0,18,437	0/0:17,0:16:18.50:0,19,326	0/0:10,0:8:13.29:0,13,249	0/0:29,0:29:48.16:0,48,1162	1/1:5,16:21:36.12:590,36,0	1/1:8,19:27:45.15:737,45,0	0/0:17,0:36:54.09:0,54,892	0/0:26,0:26:51.17:0,51,1232	1/1:4,21:25:63.13:999,63,0	1/1:2,12:14:33.03:482,33,0	1/1:6,22:28:44.94:737,45,0	1/1:8,14:22:30.10:491,30,0	1/1:3,18:21:48.16:786,48,0	0/0:24,0:24:60.19:0,60,1317	0/0:29,0:28:60.19:0,60,1390	0/0:45,0:44:96.27:0,96,2141	0/0:31,0:31:65.88:0,66,1409	0/0:15,0:25:36.09:0,36,568	0/0:6,0:14:27.09:0,27,478	0/0:12,0:37:72.18:0,72,1175	1/1:9,17:26:48.02:682,48,0	1/1:6,22:28:47.57:738,48,0	1/1:11,29:40:69.24:1130,69,0	0/0:20,0:20:48.14:0,48,996	0/0:14,0:31:64.99:0,65,1002	0/0:9,0:30:41.95:0,42,697	0/0:7,0:14:21.06:0,21,341
chr10	94737420	.	AGTTACT	A	18710.91	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-10.141;DP=723;FS=11.841;HRun=0;HaplotypeScore=230.1623;InbreedingCoeff=0.9990;MQ=83.41;MQ0=0;MQRankSum=-19.363;QD=41.58;ReadPosRankSum=2.014;VQSLOD=3.2385;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:59:969,59,0	1/1:1,11:12:23.98:480,24,0	0/0:24,0:24:62.71:0,63,1776	0/0:35,0:35:99:0,99,2980	1/1:2,22:24:35.92:716,36,0	1/1:0,23:23:54.07:1179,54,0	1/1:1,17:18:44.95:937,45,0	0/0:27,0:27:78.27:0,78,1950	1/1:0,36:36:83.96:1748,84,0	1/1:5,30:35:90.26:2067,90,0	1/1:0,20:19:38.55:509,39,0	1/1:0,28:28:68.55:1262,69,0	1/1:1,22:23:62.97:1249,63,0	1/1:2,22:24:54.03:1127,54,0	1/1:2,32:34:77.90:1475,78,0	1/1:2,25:27:62.69:1365,63,0	0/0:31,0:31:93.32:0,93,3325	1/1:1,17:18:39.01:848,39,0	0/0:18,0:18:48.16:0,48,1238	0/0:22,0:22:63.15:0,63,1564	0/0:32,0:31:90.27:0,90,2282	1/1:0,21:21:50.83:972,51,0	1/1:3,13:16:26.57:270,27,0	1/1:3,33:36:32.11:528,32,0	1/1:1,23:24:56.72:1008,57,0	0/0:32,0:32:22.60:0,23,2482	0/0:29,0:29:84.29:0,84,2324	0/0:23,0:23:51.18:0,51,1422
chr10	94737591	.	TC	T	5505.75	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=6.653;DP=614;FS=0.000;HRun=8;HaplotypeScore=121.7360;InbreedingCoeff=0.9864;MQ=79.07;MQ0=0;MQRankSum=-4.091;QD=23.63;ReadPosRankSum=2.372;VQSLOD=3.8724;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,27:37:71.48:675,71,0	0/0:8,0:8:24.07:0,24,280	0/0:31,0:29:62.84:0,63,703	0/0:24,0:22:39.83:0,40,410	0/0:18,0:18:39.11:0,39,458	1/1:3,20:23:57.09:550,57,0	1/1:1,19:20:48.08:463,48,0	0/0:31,0:31:60.18:0,60,724	0/0:25,0:25:63.15:0,63,741	1/1:0,19:19:57.09:550,57,0	1/1:0,16:16:45.02:425,45,0	1/1:1,20:21:60.10:579,60,0	1/1:2,13:15:36.06:348,36,0	1/1:4,16:20:48.06:458,48,0	0/0:24,0:23:72.22:0,72,869	0/0:19,0:19:48.15:0,48,578	0/0:26,0:25:66.18:0,66,782	0/0:27,1:28:37.11:0,37,699	0/0:16,0:16:39.12:0,39,465	0/0:12,1:13:7.13:0,7,370	0/0:41,0:41:87.22:0,87,1024	1/1:0,15:15:42.07:406,42,0	1/1:1,15:16:36.06:348,36,0	1/1:2,29:31:75.02:705,75,0	0/0:19,0:18:51.16:0,51,615	0/0:26,0:26:69.21:0,69,820	0/0:23,0:24:55.72:0,56,655	0/0:8,0:8:18.05:0,18,207
chr10	94737660	.	T	TTCCTCC	23070.55	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.276;DP=633;FS=55.940;HRun=0;HaplotypeScore=151.1117;InbreedingCoeff=0.9043;MQ=51.58;MQ0=3;MQRankSum=-7.475;QD=44.45;ReadPosRankSum=1.363;VQSLOD=2.8102;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,5:30:54.04:1049,54,0	1/1:5,10:16:26.94:726,27,0	0/0:32,0:20:26.62:0,27,363	0/0:42,0:21:31.62:0,32,557	1/1:2,16:19:27.05:589,27,0	1/1:14,6:20:30.10:890,30,0	1/1:18,9:25:51.13:1082,51,0	1/1:16,0:16:24.06:342,24,0	1/1:2,13:16:24.08:759,24,0	1/1:11,5:17:33.03:809,33,0	1/1:16,6:22:54.18:1260,54,0	1/1:12,11:23:54.17:1446,54,0	1/1:15,8:24:60.20:1588,60,0	1/1:7,7:14:27.02:791,27,0	1/1:5,15:21:27.09:901,27,0	1/1:2,11:14:18.06:602,18,0	0/0:40,0:40:99:0,108,2109	1/1:6,14:20:6.02:201,6,0	1/1:5,17:22:48.09:1085,48,0	1/1:1,13:16:33.11:987,33,0	1/1:14,11:28:8.98:207,9,0	1/1:15,4:19:36.58:809,37,0	1/1:13,7:20:36.12:983,36,0	1/1:22,7:29:54.16:1135,54,0	1/1:3,16:20:24.08:744,24,0	1/1:3,22:28:75.20:2099,75,0	1/1:5,23:29:59.94:1870,60,0	1/1:5,1:6:6:117,6,0
chr10	94737675	.	CTTG	C	1120.28	PASS	AB=0.966;AC=18;AF=0.321;AN=56;BaseQRankSum=1.436;DP=608;FS=2.213;HRun=0;HaplotypeScore=167.7011;InbreedingCoeff=-0.4643;MQ=48.82;MQ0=3;MQRankSum=-3.183;QD=2.81;ReadPosRankSum=-7.353;VQSLOD=0.3009;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,2:27:88.27:88,0,743	0/1:12,0:12:16.05:16,0,346	0/1:32,0:17:14.49:14,0,506	0/1:33,0:14:15.37:15,0,580	0/1:22,0:22:35.70:36,0,469	0/0:12,0:12:33.11:0,33,524	0/1:29,0:27:99:219,0,618	0/1:8,7:15:99:220,0,387	0/0:17,0:17:24.84:0,25,378	0/1:16,1:17:68.97:69,0,528	0/1:22,0:22:21.99:22,0,996	0/1:22,1:23:42.42:42,0,850	0/1:22,2:24:68.05:68,0,924	0/0:14,0:14:2.13:0,2,481	0/0:23,0:23:41.50:0,41,702	0/0:15,0:15:24.08:0,24,354	0/0:46,0:46:99:0,132,2871	0/0:19,0:19:13.64:0,14,233	0/1:21,0:21:99:161,0,602	0/1:17,0:17:27.64:28,0,504	0/0:21,0:21:20.82:0,21,297	0/1:19,1:20:99:101,0,658	0/0:15,0:15:45.15:0,45,705	0/1:31,0:31:99:144,0,805	0/1:20,0:20:4.12:4,0,468	0/1:29,0:29:0.64:1,0,1156	0/0:28,0:26:7.28:0,7,783	0/1:4,0:4:26.58:27,0,61
chr10	94740040	.	T	TA	5574.70	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-1.218;DP=616;FS=0.000;HRun=12;HaplotypeScore=78.0399;InbreedingCoeff=0.9646;MQ=81.81;MQ0=0;MQRankSum=-0.488;QD=14.63;ReadPosRankSum=2.168;VQSLOD=5.5074;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,32:41:33.11:614,33,0	1/1:4,0:12:17.08:86,17,0	0/0:24,0:22:11.57:0,12,75	0/0:15,0:16:21.52:0,22,151	1/1:4,2:28:69.09:389,69,0	1/1:1,7:10:10.19:187,10,0	1/1:3,10:14:15.02:146,15,0	0/0:25,1:27:41.41:0,41,454	1/1:8,0:26:46.81:239,47,0	1/1:8,13:21:5.13:353,5,0	1/1:5,13:18:27.04:263,27,0	1/1:2,20:22:38.92:374,39,0	1/1:2,17:19:45.07:438,45,0	1/1:1,14:16:38.64:347,39,0	1/1:2,0:11:22.84:118,23,0	1/1:2,0:14:31.45:164,31,0	0/0:29,1:30:47.35:0,47,491	1/1:4,3:27:65.91:368,66,0	0/0:19,0:19:32.48:0,32,222	0/0:18,0:18:38.70:0,39,280	0/0:28,0:28:56.52:0,57,404	1/1:4,21:25:31.46:428,31,0	1/1:5,21:26:39.04:380,39,0	1/1:3,23:29:53.59:480,54,0	1/1:4,1:22:39.83:200,40,0	0/0:31,1:32:30.39:0,30,387	0/0:32,0:32:76.95:0,77,548	0/0:8,0:9:25.90:0,26,181
chr10	94740500	.	A	AACAC	1739.46	PASS	AB=1.000;AC=41;AF=0.788;AN=52;BaseQRankSum=-3.380;DP=516;FS=9.762;HRun=0;HaplotypeScore=103.8757;InbreedingCoeff=0.0827;MQ=68.47;MQ0=21;MQRankSum=-0.151;QD=4.40;ReadPosRankSum=0.972;VQSLOD=1.3475;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:28:17.60:28,0,18	0/1:14,0:14:30.36:113,0,30	./.	./.	1/1:10,0:10:3:25,3,0	1/1:20,0:19:8.24:178,8,0	1/1:27,0:26:19.82:137,20,0	0/0:26,0:24:0.19:0,0,1	1/1:20,0:19:9.90:128,10,0	1/1:14,0:14:2.95:39,3,0	1/1:7,0:7:3.01:65,3,0	1/1:19,0:26:11.38:171,11,0	1/1:16,0:16:18.14:200,18,0	1/1:8,0:14:2.74:12,3,0	0/1:24,0:24:33.22:47,0,33	1/1:11,0:10:5.91:76,6,0	0/0:20,0:22:16.17:0,16,134	1/1:16,5:24:10.11:251,10,0	1/1:12,0:10:1.04:3,1,0	0/0:4,0:6:3:0,3,28	0/1:40,0:39:50.33:76,0,50	1/1:12,0:12:3.01:60,3,0	1/1:9,0:7:2.80:13,3,0	1/1:14,4:18:3.01:70,3,0	1/1:10,1:12:3.80:106,4,0	1/1:9,0:9:0.43:1,0,0	1/1:11,0:11:5.99:48,6,0	0/1:11,0:9:26.52:27,0,35
chr10	94741032	.	CT	C	4368.14	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.604;DP=594;FS=2.324;HRun=3;HaplotypeScore=58.2348;InbreedingCoeff=0.9940;MQ=85.83;MQ0=0;MQRankSum=-3.021;QD=34.13;ReadPosRankSum=3.374;VQSLOD=5.4777;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,135,1883	1/1:0,12:12:33.10:409,33,0	0/0:20,0:20:57.16:0,57,784	0/0:18,0:18:51.17:0,51,734	1/1:0,6:6:18.06:223,18,0	0/0:14,0:14:42.14:0,42,605	0/0:40,0:40:99:0,117,1578	0/0:20,0:20:60.19:0,60,849	1/1:1,25:26:66.21:818,66,0	0/0:18,0:18:54.18:0,54,764	0/0:8,0:8:15.04:0,15,198	0/0:22,0:22:66.22:0,66,951	0/0:22,0:22:66.21:0,66,933	0/0:25,0:25:66.21:0,66,930	1/1:0,29:29:81.25:1004,81,0	1/1:0,18:18:54.17:669,54,0	0/0:36,0:36:99:0,108,1537	1/1:0,23:23:63.16:762,63,0	0/0:13,0:13:39.12:0,39,545	0/0:13,0:13:36.09:0,36,482	0/0:36,0:37:99:0,101,1464	0/0:12,0:12:36.12:0,36,513	0/0:14,0:14:39.12:0,39,542	0/0:37,0:37:99:0,111,1581	1/1:0,14:14:39.12:483,39,0	0/0:19,0:19:54.16:0,54,739	0/0:24,0:24:72.19:0,72,965	0/0:6,0:6:18.06:0,18,259
chr10	94741419	.	GGA	G	6589.75	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.088;DP=693;FS=1.121;HRun=0;HaplotypeScore=84.8992;InbreedingCoeff=0.9998;MQ=85.24;MQ0=0;MQRankSum=-1.300;QD=43.93;ReadPosRankSum=4.051;VQSLOD=6.4931;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,178,3454	1/1:0,13:13:33.11:532,33,0	0/0:26,0:26:78.25:0,78,1423	0/0:18,0:18:47.42:0,47,823	1/1:0,19:19:54.18:879,54,0	0/0:16,0:16:45.15:0,45,914	0/0:37,0:37:99:0,111,2143	0/0:22,0:22:66.23:0,66,1333	1/1:0,24:24:66.23:1067,66,0	0/0:34,0:34:99:0,102,2017	0/0:10,0:10:30.10:0,30,608	0/0:22,0:22:66.21:0,66,1278	0/0:20,0:20:57.17:0,57,1080	0/0:27,0:27:81.28:0,81,1645	1/1:0,22:22:60.20:979,60,0	1/1:0,28:28:66.23:1077,66,0	0/0:30,0:30:87.30:0,87,1752	1/1:0,23:23:66.23:1077,66,0	0/0:21,0:21:60.21:0,60,1199	0/0:20,0:20:60.20:0,60,1193	0/0:46,0:46:99:0,138,2659	0/0:15,0:15:45.15:0,45,914	0/0:17,0:17:51.18:0,51,1028	0/0:34,0:34:99:0,99,1974	1/1:0,21:21:60.20:978,60,0	0/0:30,0:30:90.31:0,90,1821	0/0:27,0:27:81.28:0,81,1642	0/0:11,0:11:33.11:0,33,669
chr10	94742153	.	G	GCATA	5812.62	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-11.071;DP=552;FS=4.651;HRun=0;HaplotypeScore=78.0724;InbreedingCoeff=0.9051;MQ=63.30;MQ0=2;MQRankSum=0.001;QD=27.29;ReadPosRankSum=2.465;VQSLOD=4.0526;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,40:59:60.18:1471,60,0	0/0:8,0:8:20.81:0,21,300	0/1:16,0:9:2.96:3,0,181	0/0:9,0:6:5.86:0,6,99	0/0:19,0:19:33.07:0,33,496	1/1:13,19:35:42.14:1032,42,0	1/1:4,14:18:12.04:290,12,0	0/0:42,0:42:50.60:0,51,923	0/0:14,0:14:27.07:0,27,421	0/0:25,0:25:57.14:0,57,847	0/0:14,0:14:39.12:0,39,612	1/1:2,13:16:27.09:663,27,0	1/1:2,15:17:33.11:805,33,0	1/1:3,9:12:18.06:442,18,0	0/0:9,0:9:24.08:0,24,398	0/0:7,0:7:15.05:0,15,249	0/0:36,0:36:63.17:0,63,1000	0/0:26,0:26:48.11:0,48,740	0/0:20,0:18:21.02:0,21,271	0/0:13,0:13:33.10:0,33,510	0/0:18,0:18:42.12:0,42,660	1/1:2,7:9:12.04:295,12,0	1/1:3,4:8:12.04:295,12,0	1/1:5,18:23:21.07:516,21,0	0/0:24,0:24:47.63:0,48,717	0/0:25,0:25:63.18:0,63,972	0/0:22,0:22:45.13:0,45,710	0/0:8,0:8:12.04:0,12,199
chr10	94742679	.	TATTTTTA	T	2541.34	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=5.025;DP=323;FS=10.061;HRun=0;HaplotypeScore=73.3887;InbreedingCoeff=0.8146;MQ=51.58;MQ0=52;MQRankSum=-6.536;QD=43.82;ReadPosRankSum=0.481;VQSLOD=2.6255;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:17:18.06:0,18,635	1/1:0,1:1:3.01:74,3,0	0/0:9,0:3:4.26:0,4,69	0/0:10,0:4:8.36:0,8,83	1/1:3,10:13:30.10:728,30,0	0/0:10,0:8:21.07:0,21,744	0/0:12,0:11:9.03:0,9,249	0/0:19,0:17:48.16:0,48,1552	1/1:2,7:9:12.04:287,12,0	0/0:12,0:10:24.08:0,24,730	0/0:15,0:15:15.05:0,15,534	0/0:11,0:7:12.04:0,12,386	0/0:4,0:3:9.03:0,9,332	0/0:16,0:13:24.07:0,24,756	1/1:3,4:7:12.04:286,12,0	1/1:2,6:8:12.04:294,12,0	0/0:20,0:14:18.06:0,18,564	1/1:3,6:9:18.02:387,18,0	0/0:11,0:5:15.05:0,15,515	0/0:17,0:17:45.14:0,45,1511	0/0:7,0:4:3.01:0,3,61	0/0:1,0:1:3.01:0,3,116	0/0:13,0:13:27.09:0,27,890	0/0:8,0:8:15.05:0,15,364	1/1:1,10:11:27.09:669,27,0	0/0:16,0:14:27.08:0,27,931	0/0:13,0:12:30.09:0,30,881	0/0:19,0:12:18.06:0,18,636
chr10	94742707	.	TTGTGTG	T	1218.86	PASS	AB=1.000;AC=14;AF=0.292;AN=48;BaseQRankSum=-1.406;DP=384;FS=21.861;HRun=0;HaplotypeScore=95.1806;InbreedingCoeff=0.5576;MQ=38.26;MQ0=73;MQRankSum=-0.121;QD=13.85;ReadPosRankSum=0.335;VQSLOD=1.1617;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:8,0:7:0.13:0,0,0	./.	./.	0/0:19,0:18:0.26:0,0,0	0/1:14,0:12:0:0,0,0	0/0:9,0:6:6.49:0,6,134	0/0:24,0:15:3.43:0,3,20	0/1:5,0:5:0:0,0,0	0/0:8,0:15:36.12:0,36,945	0/0:10,0:19:9.03:0,9,234	0/0:11,0:9:5.93:0,6,88	0/0:3,0:6:3.01:0,3,70	0/0:7,0:9:5.85:0,6,154	0/0:6,0:7:3.01:0,3,77	0/0:12,0:15:9.03:0,9,201	0/0:18,0:11:9.03:0,9,264	0/0:8,0:7:9:0,9,191	1/1:7,2:4:3.01:62,3,0	1/1:6,14:21:26.96:556,27,0	1/1:6,1:3:3.01:62,3,0	./.	0/0:12,0:15:0:0,0,0	0/0:8,0:8:0:0,0,0	0/0:17,0:19:9.03:0,9,212	1/1:7,6:11:15.03:239,15,0	1/1:2,9:10:21.07:433,21,0	0/0:16,0:9:11.66:0,12,296
chr10	94742861	.	CT	C	1516.64	PASS	AB=0.667;AC=16;AF=0.286;AN=56;BaseQRankSum=-2.416;DP=414;FS=10.795;HRun=13;HaplotypeScore=55.6016;InbreedingCoeff=0.5682;MQ=45.01;MQ0=42;MQRankSum=4.676;QD=8.33;ReadPosRankSum=4.548;VQSLOD=1.4191;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,34:38:39.41:452,39,0	0/0:3,0:6:11.99:0,12,54	0/0:7,0:2:0:0,0,0	0/0:7,0:2:2.99:0,3,24	0/0:11,0:16:26.36:0,26,178	1/1:3,13:15:4.64:191,5,0	0/1:6,12:10:2.29:148,0,2	0/0:10,0:11:14.60:0,15,102	0/0:7,0:9:8.32:0,8,47	0/0:8,0:12:15.91:0,16,86	0/0:5,0:6:5.68:0,6,29	1/1:2,10:12:19.93:137,20,0	1/1:5,9:13:29.80:216,30,0	1/1:5,7:10:11.82:87,12,0	0/0:6,0:10:10.30:0,10,69	0/0:3,0:12:25.04:0,25,133	0/0:18,0:13:27.93:0,28,265	0/0:2,0:7:14.36:0,14,81	0/0:18,2:14:16.81:0,17,293	0/0:16,2:17:13.89:0,14,264	0/1:9,3:9:38.72:39,0,140	0/1:7,6:13:20.19:35,0,20	1/1:3,10:12:23.45:175,23,0	0/1:8,18:26:17.02:219,0,17	0/0:13,0:16:31.70:0,32,193	0/0:13,0:12:27.04:0,27,263	0/0:14,1:15:22.95:0,23,360	0/0:4,0:9:14.32:0,14,76
chr10	94744370	.	AG	A	4148.10	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.777;DP=571;FS=8.628;HRun=3;HaplotypeScore=59.9731;InbreedingCoeff=0.9965;MQ=87.15;MQ0=0;MQRankSum=-0.507;QD=34.00;ReadPosRankSum=3.029;VQSLOD=3.9766;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.27:0,84,1188	1/1:0,14:14:42.13:520,42,0	0/0:20,0:20:41.97:0,42,564	0/0:25,0:25:60.17:0,60,792	1/1:2,12:14:39.09:467,39,0	0/0:16,0:16:48.16:0,48,691	0/0:36,0:36:99:0,99,1385	0/0:25,0:25:75.24:0,75,1064	1/1:1,15:16:45.14:557,45,0	0/0:10,0:10:30.10:0,30,420	0/0:14,0:14:36.09:0,36,480	0/0:25,0:25:75.24:0,75,1063	0/0:15,0:15:42.14:0,42,605	0/0:27,0:27:78.25:0,78,1106	1/1:0,17:17:45.12:558,45,0	1/1:0,14:14:36.11:446,36,0	0/0:35,0:35:99:0,102,1468	1/1:0,30:30:84.26:1041,84,0	0/0:24,0:24:69.20:0,69,943	0/0:11,0:11:33.11:0,33,474	0/0:43,0:43:99:0,126,1776	0/0:12,0:12:33.11:0,33,475	0/0:8,0:8:24.07:0,24,327	0/0:30,0:30:87.24:0,87,1212	1/1:0,17:17:45.14:558,45,0	0/0:25,0:25:72.23:0,72,1012	0/0:14,0:13:42.09:0,42,551	0/0:5,0:5:15.04:0,15,198
chr10	94744797	.	C	CA	21452.39	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-7.912;DP=573;FS=1.696;HRun=1;HaplotypeScore=53.6154;InbreedingCoeff=0.9999;MQ=89.38;MQ0=0;MQRankSum=-7.737;QD=41.90;ReadPosRankSum=5.765;VQSLOD=4.6473;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:66.22:989,66,0	1/1:0,14:14:42.14:628,42,0	0/0:22,0:22:62.87:0,63,777	0/0:20,0:20:54.05:0,54,631	1/1:1,21:22:63.13:894,63,0	1/1:2,24:26:72.24:1079,72,0	1/1:0,23:23:66.22:989,66,0	1/1:1,25:26:75.25:1124,75,0	1/1:0,17:17:51.17:764,51,0	1/1:1,23:24:69.19:1003,69,0	1/1:0,20:20:54.18:809,54,0	1/1:2,15:17:45.15:664,45,0	1/1:1,19:20:45.15:674,45,0	1/1:0,16:16:45.15:674,45,0	1/1:0,23:23:66.22:989,66,0	1/1:1,18:19:48.16:720,48,0	0/0:19,0:19:57.17:0,57,725	1/1:1,26:27:78.26:1169,78,0	1/1:1,23:24:69.22:1015,69,0	1/1:1,19:20:57.08:802,57,0	1/1:1,18:19:54.18:809,54,0	1/1:0,12:12:36.08:514,36,0	1/1:0,14:14:39.13:585,39,0	1/1:1,16:17:45.15:674,45,0	1/1:0,17:17:48.16:719,48,0	1/1:0,25:25:75.24:1101,75,0	1/1:2,28:30:87.29:1298,87,0	1/1:0,17:17:51.17:764,51,0
chr10	94744896	.	T	TC	3796.93	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=1.248;DP=517;FS=1.713;HRun=9;HaplotypeScore=65.7706;InbreedingCoeff=0.8277;MQ=74.46;MQ0=1;MQRankSum=-0.931;QD=13.96;ReadPosRankSum=-2.171;VQSLOD=3.2761;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,1:20:20.73:0,21,398	1/1:1,1:11:17.31:108,17,0	0/1:18,0:16:18.45:18,0,158	0/0:11,0:9:6.22:0,6,67	1/1:11,2:17:32.53:258,33,0	0/0:19,1:21:16.84:0,17,363	0/0:21,0:21:56.96:0,57,491	1/1:10,10:20:28.74:281,29,0	1/1:3,2:17:28.67:179,29,0	0/0:21,0:21:56.99:0,57,495	0/0:17,0:17:38.99:0,39,338	0/0:17,0:18:21.65:0,22,341	0/0:15,0:15:41.95:0,42,359	0/0:22,0:23:59.01:0,59,501	1/1:3,4:11:14.37:90,14,0	1/1:3,1:23:25.73:147,26,0	0/0:25,0:25:65.97:0,66,573	1/1:3,1:20:28.70:167,29,0	1/1:11,6:17:0.96:224,1,0	1/1:10,9:19:33.07:356,33,0	1/1:3,9:12:1.02:239,1,0	0/0:18,1:19:44.99:0,45,390	0/0:15,0:15:38.98:0,39,338	0/0:19,0:19:50.96:0,51,438	1/1:11,1:17:40.87:288,41,0	1/1:3,17:20:22.06:462,22,0	1/1:9,18:26:22.21:468,22,0	1/1:3,20:23:5.05:512,5,0
chr10	94745734	.	A	ACTCT	2416.05	PASS	AC=14;AF=0.280;AN=50;BaseQRankSum=6.389;DP=351;FS=0.000;HRun=0;HaplotypeScore=39.4903;InbreedingCoeff=0.6980;MQ=23.69;MQ0=157;MQRankSum=-2.076;QD=38.97;ReadPosRankSum=-0.100;VQSLOD=2.8658;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:14:15.05:0,15,279	1/1:1,2:2:6.02:159,6,0	./.	./.	1/1:1,9:8:12.04:319,12,0	0/0:12,0:5:3.01:0,3,56	0/0:23,0:9:15.05:0,15,279	0/0:14,0:8:24.06:0,24,404	1/1:2,9:5:12.04:319,12,0	./.	0/0:12,0:11:9.03:0,9,168	0/0:10,0:1:3.01:0,3,56	0/0:13,0:9:8.89:0,9,149	0/0:11,0:4:3.01:0,3,56	1/1:1,8:7:21.07:558,21,0	1/1:1,8:8:21.07:535,21,0	0/0:25,0:15:9.03:0,9,168	1/1:3,6:7:14.76:379,15,0	0/0:13,0:6:18.06:0,18,320	0/0:5,0:4:6.02:0,6,112	0/0:19,0:8:3.01:0,3,56	0/0:10,0:10:9.03:0,9,167	0/0:13,0:12:9.03:0,9,167	0/0:15,0:8:6.02:0,6,112	1/1:1,8:10:12.04:319,12,0	0/0:15,0:9:21.07:0,21,381	0/0:7,0:3:3.01:0,3,56	0/0:8,0:5:6.02:0,6,112
chr10	94745920	.	T	TC	114.41	PASS	AB=1.000;AC=8;AF=0.364;AN=22;BaseQRankSum=2.201;DP=197;FS=0.000;HRun=0;HaplotypeScore=18.7509;InbreedingCoeff=0.4107;MQ=16.30;MQ0=127;MQRankSum=-0.112;QD=1.66;ReadPosRankSum=1.753;VQSLOD=0.6090;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,2:2:3.01:35,3,0	./.	0/1:47,0:2:0:0,0,0	1/1:0,6:7:9.02:101,9,0	0/0:2,0:1:3.01:0,3,36	./.	./.	./.	0/1:6,0:2:5.81:6,0,21	0/0:10,0:6:11.77:0,12,72	./.	./.	./.	./.	./.	./.	./.	./.	0/0:8,0:6:9:0,9,104	./.	./.	./.	./.	1/1:1,5:5:6.02:68,6,0	0/0:6,0:2:3.37:0,3,9	0/0:2,0:2:2.98:0,3,23	0/0:5,0:3:6.01:0,6,66
chr10	94747081	.	CTTTTTTCTTTTTTTTTTTT	C	214.01	PASS	AB=1.000;AC=7;AF=0.152;AN=46;BaseQRankSum=-3.264;DP=312;FS=0.000;HRun=0;HaplotypeScore=89.6127;InbreedingCoeff=0.4420;MQ=28.66;MQ0=109;MQRankSum=-1.051;QD=7.13;ReadPosRankSum=-0.890;VQSLOD=1.5203;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:10:11.95:0,12,134	0/0:3,0:2:1.82:0,2,5	0/0:27,0:1:0.47:0,0,1	0/0:43,0:2:2.50:0,2,9	0/0:4,0:3:9.03:0,9,208	1/1:3,0:3:5.98:76,6,0	./.	0/0:10,0:5:12.03:0,12,262	./.	0/0:13,0:9:21.07:0,21,1109	0/0:9,0:9:24.08:0,24,1073	1/1:9,0:6:6.63:73,7,0	0/1:12,0:9:31.02:31,0,54	0/0:4,1:2:2.37:0,2,8	./.	0/0:3,0:2:6.02:0,6,177	0/0:24,0:17:33.11:0,33,1713	0/0:8,0:3:9.03:0,9,262	0/0:13,0:9:6.22:0,6,847	0/0:12,0:8:24.08:0,24,797	./.	1/1:1,5:6:1.91:147,2,0	0/0:1,14:14:0.47:0,0,1	./.	0/0:7,0:3:9.03:0,9,162	0/0:27,0:19:34.24:0,34,1509	0/0:20,0:17:37.05:0,37,1270	0/0:2,0:1:3.01:0,3,60
chr10	94747259	.	G	GTTT	1704.56	PASS	AB=0.911;AC=18;AF=0.321;AN=56;BaseQRankSum=-0.998;DP=410;FS=2.623;HRun=4;HaplotypeScore=98.2983;InbreedingCoeff=0.5166;MQ=54.26;MQ0=3;MQRankSum=-4.406;QD=10.86;ReadPosRankSum=-0.987;VQSLOD=-0.4896;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:33:2.72:3,0,341	1/1:3,5:11:24.05:365,24,0	0/0:16,0:11:26.70:0,27,295	0/0:23,0:16:33.60:0,34,557	0/1:3,4:6:0.75:114,0,1	0/1:18,1:19:27.42:27,0,122	0/0:18,0:15:31.94:0,32,265	0/0:21,0:21:48.26:0,48,591	1/1:2,5:10:17.64:240,18,0	0/0:4,0:4:12.04:0,12,181	0/0:3,0:3:8.83:0,9,77	0/0:10,0:10:7.39:0,7,97	0/1:13,0:15:44.55:45,0,92	0/0:8,0:8:3.23:0,3,27	1/1:7,0:7:18.44:181,18,0	1/1:2,7:10:3.01:61,3,0	0/0:31,0:30:87.27:0,87,1349	1/1:10,6:14:27.98:495,28,0	0/0:23,0:23:66.03:0,66,793	0/0:16,0:14:34.92:0,35,493	0/0:18,0:18:47.98:0,48,571	0/1:8,0:8:4.94:5,0,50	0/1:11,0:11:3.61:4,0,35	0/0:22,0:22:6.89:0,7,130	1/1:3,6:9:18.06:347,18,0	0/0:16,0:16:46.68:0,47,616	0/0:19,0:19:38.34:0,38,496	0/0:5,0:5:12.04:0,12,189
chr10	94747262	.	TG	T	680.53	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=2.384;DP=404;FS=13.752;HRun=1;HaplotypeScore=86.4734;InbreedingCoeff=0.9027;MQ=55.82;MQ0=3;MQRankSum=-4.001;QD=9.45;ReadPosRankSum=-1.517;VQSLOD=-0.2296;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:43.95:0,44,307	1/1:8,3:11:22.59:126,23,0	0/0:16,0:10:29.34:0,29,290	0/0:24,1:18:30.89:0,31,452	1/1:5,2:6:11.07:54,11,0	0/0:19,0:19:16.70:0,17,128	0/0:16,1:14:33.79:0,34,240	0/0:20,0:20:60.09:0,60,680	1/1:10,1:11:22.66:157,23,0	0/0:4,0:4:11.85:0,12,109	0/0:3,0:3:8.21:0,8,38	0/0:10,0:10:18.58:0,19,98	0/0:15,0:15:4.77:0,5,192	0/0:7,0:7:11.50:0,11,62	1/1:7,0:7:19.96:138,20,0	1/1:11,0:11:11.64:83,12,0	0/0:31,0:30:90.22:0,90,1204	1/1:13,3:14:35.81:210,36,0	0/0:23,0:23:66.02:0,66,748	0/0:13,0:12:36.07:0,36,443	0/0:17,0:17:51.06:0,51,611	0/0:6,0:6:10.62:0,11,66	0/0:10,0:10:5.98:0,6,69	0/0:21,0:21:35.25:0,35,193	1/1:7,2:9:19.60:105,20,0	0/0:18,0:17:51.10:0,51,620	0/0:18,0:18:41.95:0,42,467	0/0:4,0:4:12.04:0,12,156
chr10	94747263	.	G	GTT	4212.53	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-1.729;DP=410;FS=7.686;HRun=7;HaplotypeScore=81.3764;InbreedingCoeff=0.8620;MQ=55.82;MQ0=3;MQRankSum=-3.699;QD=19.24;ReadPosRankSum=-0.730;VQSLOD=2.4075;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,23:33:51.05:717,51,0	1/1:11,0:11:23.05:204,23,0	0/0:17,0:10:6.40:0,6,157	0/0:26,0:19:9.40:0,9,269	1/1:7,0:6:6.01:60,6,0	1/1:4,14:19:32.95:453,33,0	1/1:6,10:15:24.35:323,24,0	0/0:19,0:19:12.37:0,12,138	1/1:11,0:11:19.87:148,20,0	0/0:4,0:4:0.88:0,1,3	1/1:3,0:3:3.21:34,3,0	1/1:3,8:11:7.51:185,8,0	1/1:9,5:15:41.68:509,42,0	1/1:2,5:7:11.73:128,12,0	1/1:7,0:7:10.29:121,10,0	1/1:11,0:11:7.21:51,7,0	0/0:31,0:30:84.23:0,84,966	1/1:16,0:14:23.52:207,24,0	0/0:22,0:22:36.62:0,37,178	0/0:13,0:12:27.22:0,27,184	0/0:18,0:18:23.45:0,23,195	1/1:2,4:6:15.52:229,16,0	1/1:2,8:11:15.48:213,15,0	1/1:3,18:23:34.88:479,35,0	1/1:9,0:9:17.33:152,17,0	0/0:18,0:17:47.83:0,48,257	0/0:19,0:19:31.41:0,31,204	0/0:4,0:4:11.83:0,12,76
chr10	94747270	.	TG	T	3043.30	PASS	AB=0.928;AC=41;AF=0.732;AN=56;BaseQRankSum=2.464;DP=417;FS=0.970;HRun=1;HaplotypeScore=83.1482;InbreedingCoeff=0.5185;MQ=53.18;MQ0=4;MQRankSum=0.387;QD=9.34;ReadPosRankSum=-0.327;VQSLOD=1.0133;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:31:61.50:401,62,0	0/1:10,1:11:4.97:5,0,48	0/0:17,0:9:25.49:0,25,240	0/0:24,0:16:19.06:0,19,312	0/0:5,1:5:0.70:0,1,25	1/1:18,2:20:34.98:213,35,0	1/1:13,2:12:25.45:137,25,0	1/1:20,0:20:55.09:305,55,0	0/1:11,0:11:23.29:23,0,73	1/1:2,1:3:8.23:64,8,0	1/1:6,2:8:22.99:134,23,0	1/1:14,0:13:20.76:133,21,0	1/1:15,1:16:38.82:221,39,0	1/1:8,0:8:14.57:97,15,0	0/1:9,0:9:33.88:88,0,34	0/0:11,0:11:9.42:0,9,68	0/0:33,0:32:90.23:0,90,1167	0/1:11,3:12:11.25:11,0,76	1/1:19,0:17:44.40:246,44,0	1/1:12,0:12:13.31:57,13,0	1/1:19,0:19:48.23:221,48,0	1/1:6,0:6:17.29:100,17,0	1/1:14,0:14:26.05:164,26,0	1/1:23,0:23:37.68:227,38,0	0/1:8,1:9:2.59:3,0,72	1/1:21,0:20:42.80:234,43,0	1/1:18,0:18:19.55:126,20,0	1/1:4,0:4:4.05:14,4,0
chr10	94747280	.	TG	T	275.40	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.253;DP=436;FS=1.617;HRun=1;HaplotypeScore=92.3355;InbreedingCoeff=0.7090;MQ=51.19;MQ0=4;MQRankSum=-4.453;QD=16.20;ReadPosRankSum=-2.471;VQSLOD=3.0621;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:52.83:0,53,655	0/0:12,0:12:27.01:0,27,336	0/0:22,0:13:19.86:0,20,424	0/0:19,0:13:14.58:0,15,292	0/0:6,1:6:9:0,9,108	0/0:18,0:18:42.40:0,42,576	0/0:14,0:11:25.94:0,26,271	0/0:22,0:22:66.14:0,66,820	0/0:11,0:11:2.81:0,3,225	1/1:2,6:7:20.78:209,21,0	1/1:3,6:8:20.62:184,21,0	0/0:16,0:15:0.22:0,0,330	0/0:15,1:16:10.85:0,11,407	0/0:10,0:10:10.02:0,10,218	0/0:8,0:8:8.86:0,9,190	0/0:10,0:10:15.04:0,15,201	0/0:34,0:33:93.14:0,93,1284	0/0:15,0:14:38.97:0,39,500	0/0:23,0:21:60.15:0,60,793	0/0:12,0:12:36.12:0,36,523	0/0:18,0:18:54.07:0,54,658	0/0:5,0:5:14.41:0,14,183	0/0:12,0:12:30.08:0,30,391	0/0:24,0:24:41.94:0,42,507	0/0:13,0:13:35.93:0,36,456	0/0:25,0:24:72.17:0,72,941	0/0:18,0:18:45.10:0,45,598	0/0:4,0:4:12.04:0,12,175
chr10	94747548	.	C	CAG	695.70	PASS	AB=0.586;AC=10;AF=0.179;AN=56;BaseQRankSum=7.423;DP=563;FS=0.000;HRun=0;HaplotypeScore=122.2167;InbreedingCoeff=0.7510;MQ=57.66;MQ0=5;MQRankSum=-5.895;QD=6.38;ReadPosRankSum=-0.153;VQSLOD=3.2408;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:54.08:0,54,667	0/1:4,7:11:1.78:46,0,2	0/0:29,0:18:45.25:0,45,540	0/0:36,0:23:63.13:0,63,857	0/0:4,10:14:0:0,0,0	0/0:18,0:18:24.97:0,25,357	0/0:27,0:24:48.11:0,48,646	0/0:17,0:17:43.22:0,43,494	1/1:4,23:26:6.02:85,6,0	0/0:22,0:22:62.13:0,62,889	0/0:11,0:11:18.03:0,18,249	0/0:26,0:24:45.12:0,45,644	0/0:13,0:12:20.81:0,21,230	0/0:16,0:15:39.03:0,39,456	0/1:5,18:22:0.30:0,0,5	1/1:5,17:21:24.04:364,24,0	0/0:31,0:31:90.12:0,90,1288	1/1:13,1:14:25.69:225,26,0	0/0:20,0:20:54.62:0,55,723	0/0:17,0:17:20.89:0,21,246	0/0:38,0:38:40.26:0,40,567	0/0:15,0:15:8.15:0,8,282	0/0:10,0:9:15.01:0,15,181	0/0:24,0:22:33.05:0,33,439	1/1:12,0:12:14.98:129,15,0	0/0:19,0:19:41.67:0,42,520	0/0:12,0:12:8.37:0,8,167	0/0:3,0:3:3.01:0,3,46
chr10	94747559	.	G	GCACACACACACA	2818.80	PASS	AB=1.000;AC=39;AF=0.750;AN=52;BaseQRankSum=-3.350;DP=579;FS=2.728;HRun=0;HaplotypeScore=200.5845;InbreedingCoeff=0.3201;MQ=49.12;MQ0=11;MQRankSum=2.034;QD=6.51;ReadPosRankSum=-4.351;VQSLOD=1.8378;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:21,14:40:3.01:86,3,0	0/1:9,0:11:23.76:24,0,122	0/0:28,0:14:1.55:0,2,5	./.	0/0:10,0:12:0.67:0,1,1	1/1:21,0:20:9.01:233,9,0	1/1:24,0:21:9.21:63,9,0	1/1:20,0:19:20.81:167,21,0	0/1:17,0:19:15.93:16,0,81	1/1:19,0:28:27.06:530,27,0	./.	1/1:28,0:26:8.98:72,9,0	1/1:14,0:13:17.47:129,17,0	1/1:11,0:10:6.02:155,6,0	0/0:21,0:22:5.60:0,6,100	0/1:22,0:24:58.49:58,0,287	0/0:39,0:38:34.59:0,35,919	0/1:15,0:15:8.10:8,0,73	1/1:19,0:19:9.82:69,10,0	1/1:15,0:15:12:118,12,0	1/1:41,0:39:21.40:411,21,0	1/1:15,0:15:11.96:155,12,0	1/1:12,0:11:11.98:98,12,0	1/1:24,0:22:8.91:95,9,0	0/1:12,0:12:0:0,0,0	1/1:21,0:21:30.75:313,31,0	1/1:13,0:13:12.87:117,13,0	1/1:3,0:3:5.98:47,6,0
chr10	94747596	.	C	CAGAGAG	3068.16	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=6.313;DP=682;FS=6.392;HRun=0;HaplotypeScore=182.7114;InbreedingCoeff=0.6691;MQ=66.11;MQ0=16;MQRankSum=-3.997;QD=17.14;ReadPosRankSum=-0.374;VQSLOD=2.7624;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:36.57:0,37,748	1/1:17,0:17:19.25:328,19,0	0/0:52,0:20:53.18:0,53,1057	0/0:58,0:27:42.30:0,42,924	1/1:17,0:16:14.24:286,14,0	0/0:21,0:21:17.96:0,18,633	0/0:22,0:21:39.10:0,39,710	0/0:32,0:31:78.14:0,78,1697	1/1:24,0:24:36.12:793,36,0	0/1:21,0:21:83.05:83,0,489	0/0:7,0:7:9.03:0,9,175	0/0:20,0:18:30.08:0,30,561	0/0:15,0:14:26.77:0,27,448	0/1:13,0:12:12.92:13,0,303	1/1:28,0:28:25.53:501,26,0	1/1:22,0:22:48.63:1050,49,0	0/0:43,0:42:99:0,108,2344	1/1:1,14:16:9.03:189,9,0	0/0:27,0:27:9.66:0,10,1282	0/0:16,0:16:15.31:0,15,323	0/0:51,0:50:75.63:0,76,1603	0/0:18,0:18:40.95:0,41,748	0/0:12,0:11:30.10:0,30,574	0/0:29,0:28:54.64:0,55,1160	0/0:6,0:17:0:0,0,0	0/0:22,0:21:8.82:0,9,753	0/1:21,0:21:10.43:10,0,607	0/0:4,0:4:12.04:0,12,272
chr10	94747983	.	ACTCGGT	A	5776.10	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.942;DP=579;FS=1.422;HRun=0;HaplotypeScore=128.1556;InbreedingCoeff=0.9969;MQ=81.85;MQ0=0;MQRankSum=-14.434;QD=55.01;ReadPosRankSum=2.102;VQSLOD=4.7567;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,4283	1/1:1,8:9:24.08:534,24,0	0/0:25,0:25:63.20:0,63,2032	0/0:23,0:23:57.19:0,57,1920	1/1:1,11:12:27.09:637,27,0	0/0:19,0:19:54.19:0,54,1876	0/0:29,0:29:87.30:0,87,3014	0/0:29,0:29:87.25:0,87,2908	1/1:0,27:27:72.25:1643,72,0	0/0:24,0:24:66.22:0,66,2253	0/0:17,0:17:51.18:0,51,1816	0/0:25,0:25:63.22:0,63,2220	0/0:15,0:15:45.15:0,45,1597	0/0:19,0:19:54.17:0,54,1823	1/1:2,13:15:33.11:779,33,0	1/1:0,9:9:27.09:638,27,0	0/0:34,0:34:99:0,99,3528	1/1:5,10:15:21.07:496,21,0	0/0:16,0:16:42.14:0,42,1499	0/0:13,0:13:39.13:0,39,1339	0/0:37,0:37:99:0,108,3789	0/0:18,0:18:45.13:0,45,1519	0/0:11,0:11:33.11:0,33,1175	0/0:30,0:30:87.30:0,87,3002	1/1:2,16:18:45.15:1049,45,0	0/0:19,0:19:57.19:0,57,1920	0/0:22,0:22:66.23:0,66,2295	0/0:6,0:6:18.06:0,18,511
chr10	94748850	.	G	GCACAGAGATACTCC	59974.60	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-3.375;DP=532;FS=4.951;HRun=0;HaplotypeScore=189.2098;InbreedingCoeff=0.8394;MQ=59.78;MQ0=1;MQRankSum=-10.279;QD=122.90;ReadPosRankSum=-0.081;VQSLOD=4.3723;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,7:28:42.14:2600,42,0	1/1:3,3:6:18.06:1049,18,0	0/0:8,0:8:24.07:0,24,817	0/0:11,0:11:24.08:0,24,788	1/1:14,3:17:6.46:273,6,0	1/1:6,10:18:45.11:2782,45,0	1/1:15,16:35:84.29:4643,84,0	1/1:14,0:14:42.14:2275,42,0	1/1:7,17:28:72.20:4659,72,0	1/1:13,8:22:66.23:3782,66,0	1/1:5,4:9:6.91:323,7,0	1/1:11,13:28:69.24:4534,69,0	1/1:14,12:29:60.17:3847,60,0	1/1:14,14:28:69.24:4425,69,0	1/1:6,10:16:33.07:2122,33,0	1/1:7,7:15:33.07:1912,33,0	0/0:25,0:25:75.20:0,75,2801	1/1:10,11:24:48.16:3322,48,0	1/1:14,6:21:60.16:2740,60,0	1/1:6,2:8:5.99:419,6,0	1/1:18,4:29:17.80:999,18,0	1/1:6,3:10:12.04:771,12,0	1/1:3,3:9:3.34:211,3,0	1/1:8,10:26:39.05:2138,39,0	1/1:10,3:14:33.11:1955,33,0	1/1:13,9:25:72.17:4085,72,0	1/1:9,7:17:45.15:2829,45,0	1/1:7,2:10:21.03:1279,21,0
chr10	94750230	.	AG	A	2968.68	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.658;DP=548;FS=2.446;HRun=5;HaplotypeScore=54.8002;InbreedingCoeff=0.9967;MQ=99.42;MQ0=0;MQRankSum=-3.677;QD=26.99;ReadPosRankSum=0.852;VQSLOD=3.6146;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.26:0,84,1130	1/1:1,6:7:18.05:204,18,0	0/0:33,0:33:87.20:0,87,1133	0/0:27,0:27:74.72:0,75,951	1/1:1,19:20:54.09:596,54,0	0/0:23,0:23:69.23:0,69,943	0/0:21,0:21:63.19:0,63,844	0/0:24,0:24:69.23:0,69,936	1/1:1,12:13:33.09:374,33,0	0/0:24,0:24:66.15:0,66,834	0/0:10,0:10:30.10:0,30,410	0/0:23,0:23:69.23:0,69,939	0/0:17,0:17:45.15:0,45,614	0/0:19,0:19:51.17:0,51,698	1/1:0,18:18:51.15:578,51,0	1/1:1,11:12:27.08:306,27,0	0/0:27,0:27:81.27:0,81,1107	1/1:1,22:23:54.15:612,54,0	0/0:18,0:18:51.15:0,51,667	0/0:15,0:15:42.03:0,42,549	0/0:43,0:43:99:0,123,1632	0/0:13,0:13:39.12:0,39,512	0/0:14,0:14:39.11:0,39,516	0/0:14,0:14:42.11:0,42,538	1/1:0,17:17:45.09:496,45,0	0/0:23,0:23:57.17:0,57,739	0/0:14,0:14:39.13:0,39,531	0/0:6,0:6:18.06:0,18,246
chr10	94750860	.	GCACATAGCTAGA	G	2153.02	PASS	AB=0.885;AC=6;AF=0.107;AN=56;BaseQRankSum=9.961;DP=550;FS=4.056;HRun=0;HaplotypeScore=223.7219;InbreedingCoeff=-0.0808;MQ=53.36;MQ0=22;MQRankSum=-9.707;QD=26.58;ReadPosRankSum=0.501;VQSLOD=2.8219;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.21:0,66,3543	0/1:6,0:6:45.39:45,0,261	0/0:22,0:2:0.89:0,1,2	0/0:13,0:1:3:0,3,28	0/0:10,4:14:3.19:0,3,185	0/0:12,0:11:30.10:0,30,1561	0/0:42,0:41:99:0,108,5857	0/0:23,0:20:51.16:0,51,2262	0/1:18,4:22:99:588,0,913	0/0:25,0:23:62.79:0,63,3423	0/0:14,0:14:42.13:0,42,2249	0/0:22,0:22:63.18:0,63,3041	0/0:9,0:9:27.09:0,27,1522	0/0:18,0:18:54.19:0,54,3187	0/1:4,3:7:99:266,0,289	0/1:15,2:17:99:640,0,673	0/0:23,0:23:66.23:0,66,3824	0/1:16,1:17:99:507,0,882	0/0:18,0:8:21.07:0,21,1018	0/0:9,0:9:18.06:0,18,986	0/0:103,0:103:99:0,243,12490	0/0:12,0:12:36.12:0,36,1828	0/0:9,0:9:24.06:0,24,1114	0/0:14,0:14:36.08:0,36,1989	0/1:11,1:11:99:230,0,228	0/0:20,0:19:57.20:0,57,3307	0/0:18,0:18:51.17:0,51,2853	0/0:5,0:5:15.03:0,15,592
chr10	94751462	.	A	AGCGCGC	2353.53	PASS	AB=1.000;AC=33;AF=0.611;AN=54;BaseQRankSum=3.212;DP=575;FS=7.355;HRun=0;HaplotypeScore=174.6651;InbreedingCoeff=0.3592;MQ=64.66;MQ0=1;MQRankSum=-4.935;QD=6.48;ReadPosRankSum=-3.338;VQSLOD=0.8904;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:37:8.94:9,0,531	1/1:3,0:3:6:51,6,0	0/0:14,0:14:14.52:0,15,140	0/0:10,0:10:5.22:0,5,33	1/1:16,0:16:5.84:79,6,0	0/0:20,0:20:0.33:0,0,377	0/0:29,0:29:12.51:0,13,316	1/1:17,0:17:11.81:87,12,0	1/1:12,0:12:8.99:77,9,0	1/1:25,0:24:43.60:497,44,0	1/1:10,0:18:2.89:73,3,0	0/1:29,0:29:38.68:39,0,434	0/0:21,0:21:9.50:0,10,561	0/1:23,0:23:28.23:28,0,477	1/1:21,0:21:2.02:23,2,0	1/1:21,0:21:10.59:76,11,0	0/0:29,0:29:66.21:0,66,1350	1/1:10,0:22:1.07:3,1,0	1/1:12,0:18:21.97:225,22,0	1/1:4,6:10:3.01:39,3,0	0/0:17,0:29:1.36:0,1,3	0/1:22,0:22:58.21:58,0,202	0/1:9,0:9:19.29:19,0,60	0/0:43,0:43:10.28:0,10,679	1/1:21,0:21:13:82,13,0	1/1:10,16:26:52.42:996,52,0	./.	1/1:12,0:12:11.83:64,12,0
chr10	94751473	.	G	GCGCACA	2005.35	PASS	AB=0.987;AC=33;AF=0.589;AN=56;BaseQRankSum=8.117;DP=494;FS=3.587;HRun=0;HaplotypeScore=142.7089;InbreedingCoeff=-0.1135;MQ=55.72;MQ0=3;MQRankSum=-4.485;QD=4.71;ReadPosRankSum=-1.221;VQSLOD=1.8147;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:99:133,0,171	1/1:4,0:4:9:99,9,0	0/0:9,0:6:5.42:0,5,50	0/0:8,0:5:3.43:0,3,9	1/1:13,0:13:2.80:63,3,0	0/1:19,0:19:40.18:40,0,120	0/1:24,3:30:52.34:52,0,57	0/0:11,0:10:17.49:0,17,102	1/1:8,0:8:5.99:49,6,0	0/1:24,0:22:99:106,0,206	1/1:14,0:14:3.01:44,3,0	0/1:31,0:31:99:120,0,130	0/1:19,0:19:50.37:50,0,178	0/1:20,0:20:40.99:41,0,166	1/1:15,0:15:3.01:49,3,0	1/1:13,0:13:11.87:83,12,0	0/0:33,0:33:64.80:0,65,1188	1/1:18,0:17:5.38:54,5,0	0/1:17,0:17:75.91:76,0,76	1/1:10,0:9:2.80:13,3,0	0/1:22,0:20:0:0,0,0	0/1:22,0:21:33.16:170,0,33	0/1:8,0:8:18.94:55,0,19	0/1:38,0:38:99:135,0,220	1/1:16,0:16:8.85:57,9,0	0/1:24,0:24:31.57:628,0,32	1/1:6,0:6:3.01:49,3,0	0/0:7,0:7:8.89:0,9,59
chr10	94751479	.	A	ACGCG	687.11	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=8.275;DP=605;FS=7.873;HRun=0;HaplotypeScore=198.9022;InbreedingCoeff=-0.1666;MQ=51.72;MQ0=5;MQRankSum=-6.244;QD=2.14;ReadPosRankSum=3.095;VQSLOD=1.2594;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:41:19.92:20,0,370	1/1:5,0:5:6.25:35,6,0	0/0:13,0:7:8.81:0,9,120	0/0:15,0:9:11.77:0,12,107	1/1:7,8:16:2.59:83,3,0	0/1:21,0:21:0.55:1,0,238	0/1:32,0:32:59.75:60,0,143	0/0:20,0:16:28.45:0,28,242	0/1:18,0:18:11.08:65,0,11	0/0:34,0:32:13.06:0,13,690	0/0:16,0:16:7.55:0,8,55	0/1:35,0:35:15.36:15,0,312	0/0:25,0:25:22.59:0,23,469	0/1:25,0:25:18.84:19,0,328	0/0:15,0:15:9.47:0,9,101	0/1:16,0:16:74.36:142,0,74	0/0:37,0:37:95.63:0,96,1582	0/1:21,0:20:58.95:59,0,60	0/0:18,0:18:13.40:0,13,380	0/0:10,0:9:1.82:0,2,5	0/0:26,0:23:2.70:0,3,47	0/1:22,0:21:62.12:62,0,84	0/1:11,0:11:12.63:13,0,43	0/0:47,0:47:14:0,14,476	0/1:23,0:23:36.07:65,0,36	0/1:26,0:25:99:192,0,184	0/0:8,0:8:0.18:0,0,2	0/1:9,0:8:6.73:7,0,114
chr10	94752594	.	GCT	G	726.01	PASS	AB=0.925;AC=25;AF=0.543;AN=46;BaseQRankSum=0.778;DP=508;FS=10.117;HRun=0;HaplotypeScore=71.5842;InbreedingCoeff=0.3912;MQ=62.15;MQ0=14;MQRankSum=1.152;QD=2.33;ReadPosRankSum=0.974;VQSLOD=0.6959;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,7:30:11.86:111,12,0	./.	./.	./.	0/0:9,0:8:2.98:0,3,21	1/1:13,0:13:12.02:121,12,0	1/1:18,9:26:9.02:98,9,0	1/1:19,0:19:0.89:2,1,0	0/0:23,0:23:10.89:0,11,93	1/1:17,0:23:10.99:55,11,0	0/1:2,0:5:0:0,0,0	1/1:12,5:17:6.01:63,6,0	1/1:16,3:19:6.01:65,6,0	1/1:15,1:18:5.16:127,5,0	0/0:11,0:15:3:0,3,26	0/0:20,0:26:8.99:0,9,80	0/0:16,0:24:15.03:0,15,170	0/0:30,0:32:42.94:0,43,409	0/1:17,0:17:24.10:24,0,36	./.	0/1:39,0:38:15.78:16,0,84	0/0:9,0:9:8.82:0,9,102	./.	1/1:28,2:34:14.69:116,15,0	0/0:9,0:9:11.83:0,12,132	0/1:26,0:24:39.17:39,0,87	0/1:16,0:16:21.51:22,0,38	1/1:6,0:3:3:26,3,0
chr10	94752642	.	CCTCT	C	1429.51	PASS	AB=0.754;AC=9;AF=0.161;AN=56;BaseQRankSum=1.400;DP=497;FS=11.968;HRun=0;HaplotypeScore=93.2262;InbreedingCoeff=0.5746;MQ=60.66;MQ0=15;MQRankSum=-3.998;QD=20.42;ReadPosRankSum=-2.452;VQSLOD=2.1424;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:81.22:0,81,1893	0/0:3,0:3:9.03:0,9,234	0/0:23,0:17:47.87:0,48,1021	0/0:36,0:13:38.68:0,39,721	0/0:9,0:9:18.04:0,18,376	0/0:10,0:9:24.05:0,24,460	0/0:27,0:25:54.19:0,54,1306	1/1:2,16:18:44.97:651,45,0	0/0:17,0:16:29.72:0,30,854	0/0:17,0:16:38.79:0,39,784	0/0:8,0:8:6.02:0,6,158	0/0:26,0:25:58.59:0,59,1248	0/0:14,0:13:33.11:0,33,765	0/0:13,0:13:30.56:0,31,619	0/0:10,0:10:21.07:0,21,522	0/0:19,0:19:27.56:0,28,660	0/0:22,0:23:45.14:0,45,1082	0/0:32,0:31:77.81:0,78,1788	1/1:2,11:13:32.26:446,32,0	1/1:1,5:6:5.72:40,6,0	0/0:10,31:40:5.98:0,6,47	0/0:6,0:6:18.05:0,18,416	0/0:6,0:5:15.05:0,15,390	0/0:37,0:36:87.28:0,87,2156	0/0:9,0:9:23.97:0,24,436	0/1:7,5:11:76.13:179,0,76	0/1:3,12:15:2.87:164,0,3	0/1:6,0:3:14.19:101,0,14
chr10	94753480	.	GT	G	9977.61	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=5.375;DP=532;FS=25.070;HRun=9;HaplotypeScore=97.3849;InbreedingCoeff=0.9839;MQ=65.24;MQ0=3;MQRankSum=-1.688;QD=21.64;ReadPosRankSum=2.102;VQSLOD=3.6235;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,42:43:99:1042,114,0	1/1:1,5:6:15.01:137,15,0	0/0:25,0:19:39.03:0,39,410	0/0:17,0:13:15.49:0,15,320	1/1:1,20:21:54.03:494,54,0	1/1:3,13:16:39.02:357,39,0	1/1:2,13:15:36.02:328,36,0	1/1:7,18:25:54:490,54,0	1/1:3,7:10:21.01:192,21,0	1/1:2,19:21:54.03:494,54,0	1/1:0,13:13:36.01:328,36,0	1/1:3,27:29:66.01:599,66,0	1/1:3,11:14:36.02:329,36,0	1/1:1,14:15:42.02:384,42,0	1/1:3,7:10:27.01:244,27,0	1/1:2,17:19:48.03:439,48,0	0/0:28,0:28:65.98:0,66,780	1/1:8,20:28:52.51:538,53,0	1/1:6,11:17:33.01:302,33,0	1/1:1,8:9:18.81:188,19,0	1/1:5,18:22:45.02:412,45,0	1/1:1,12:13:27.01:247,27,0	1/1:4,15:19:45.02:412,45,0	1/1:3,21:24:47.75:438,48,0	1/1:3,23:26:66.03:603,66,0	1/1:4,15:19:44.99:405,45,0	1/1:0,13:13:36.02:329,36,0	1/1:1,11:12:27.01:247,27,0
chr10	94753489	.	TA	T	1534.07	PASS	AB=0.994;AC=41;AF=0.732;AN=56;BaseQRankSum=6.491;DP=529;FS=7.581;HRun=1;HaplotypeScore=130.5919;InbreedingCoeff=0.3086;MQ=62.25;MQ0=9;MQRankSum=-2.237;QD=3.48;ReadPosRankSum=4.825;VQSLOD=0.2804;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:44,0:44:36.78:186,37,0	0/1:7,0:7:29.69:33,0,30	0/0:24,1:16:37.98:0,38,527	0/0:20,0:14:13.76:0,14,380	1/1:26,0:24:23.12:65,23,0	1/1:13,0:13:25.48:87,25,0	1/1:14,1:14:23.09:82,23,0	0/1:19,0:19:14.34:18,0,14	0/1:12,0:11:8.63:16,0,9	0/1:23,0:22:39.84:40,0,40	0/1:14,0:14:7.74:46,0,8	1/1:28,0:27:38.47:141,38,0	1/1:12,0:12:19.53:79,20,0	1/1:15,0:15:12.88:92,13,0	1/1:9,2:11:18.56:115,19,0	0/1:20,1:21:16.24:45,0,16	0/0:29,0:29:50.28:0,50,865	1/1:24,0:23:32.63:103,33,0	0/0:14,0:14:3.17:0,3,61	1/1:8,1:9:11.99:39,12,0	1/1:22,0:21:9.02:60,9,0	1/1:13,0:13:2.13:47,2,0	1/1:16,0:16:17.47:51,17,0	1/1:24,0:24:9.62:82,10,0	1/1:26,0:25:34.87:119,35,0	0/1:17,0:17:5.28:30,0,5	1/1:14,0:14:17.35:54,17,0	1/1:15,1:15:17.45:77,17,0
chr10	94753497	.	TTGTGTGTGTGTGTGTG	T	4376.80	PASS	AB=0.767;AC=17;AF=0.315;AN=54;BaseQRankSum=6.450;DP=552;FS=7.252;HRun=0;HaplotypeScore=259.6385;InbreedingCoeff=0.7450;MQ=57.07;MQ0=12;MQRankSum=-6.296;QD=25.60;ReadPosRankSum=2.193;VQSLOD=2.0407;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:39,4:43:18.05:616,18,0	0/0:6,0:10:18.06:0,18,1261	0/0:23,0:15:3.01:0,3,39	./.	0/0:22,0:22:21.07:0,21,1335	1/1:9,4:12:12.04:526,12,0	1/1:13,2:14:6.02:263,6,0	0/0:23,0:23:26.76:0,27,1453	0/0:15,0:14:17.65:0,18,867	0/0:23,0:23:26.57:0,27,388	0/0:15,0:14:6.02:0,6,148	1/1:16,6:21:24.08:1052,24,0	1/1:11,0:13:6.02:223,6,0	1/1:11,4:14:12.04:526,12,0	0/0:10,0:12:18.06:0,18,1275	0/0:22,0:23:45.15:0,45,2964	0/0:26,0:30:51.17:0,51,2827	0/0:23,0:25:42.13:0,42,2262	0/0:19,0:19:20.28:0,20,972	0/0:15,0:15:15.05:0,15,907	0/0:25,0:23:3.01:0,3,225	1/1:6,4:10:9.03:395,9,0	1/1:16,0:17:3.01:112,3,0	0/1:16,7:23:64.30:663,0,64	0/0:26,0:26:30.10:0,30,2017	0/0:20,0:20:51.17:0,51,3158	0/0:19,0:18:21.71:0,22,1088	0/0:11,0:10:18.06:0,18,810
chr10	94753902	.	TGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGCGTGC	T	11096.74	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=6.246;DP=540;FS=7.112;HRun=0;HaplotypeScore=321.9782;InbreedingCoeff=0.7288;MQ=43.12;MQ0=25;MQRankSum=-8.741;QD=57.80;ReadPosRankSum=4.141;VQSLOD=2.3027;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:26.76:0,27,2020	1/1:3,2:5:6.02:520,6,0	0/0:15,0:3:5.96:0,6,44	0/0:12,0:3:9.03:0,9,419	1/1:4,18:22:9.03:744,9,0	0/0:10,0:10:18.95:0,19,1520	0/0:14,0:12:8.23:0,8,669	0/0:19,0:17:51.18:0,51,3353	1/1:11,23:34:26.45:2469,26,0	0/1:31,0:30:99:1008,0,949	1/1:14,0:12:6.16:147,6,0	0/0:19,0:19:26.98:0,27,1674	0/0:9,0:9:20.40:0,20,1511	0/0:10,0:9:15.05:0,15,1095	1/1:6,25:31:27.25:2518,27,0	1/1:5,11:15:8.92:827,9,0	0/0:33,0:32:90.28:0,90,10422	1/1:2,11:13:9.03:805,9,0	0/0:21,0:21:63.21:0,63,4664	0/0:5,0:5:1.42:0,1,206	0/0:50,0:45:50.36:0,50,3317	0/0:18,0:18:11.86:0,12,745	0/0:12,0:11:5.17:0,5,240	0/0:17,0:15:21.06:0,21,1113	1/1:12,14:26:24.55:2061,25,0	0/0:32,0:30:80.36:0,80,7502	0/0:13,0:12:28.76:0,29,1825	0/0:6,0:5:3.01:0,3,466
chr10	94753908	.	TGTGTGTGTGTGTGCGCGCGCGCGCGCGTGC	T	9795.61	PASS	AC=18;AF=0.333;AN=54;BaseQRankSum=9.476;DP=483;FS=8.687;HRun=0;HaplotypeScore=250.0725;InbreedingCoeff=0.8151;MQ=43.65;MQ0=23;MQRankSum=-6.756;QD=61.61;ReadPosRankSum=5.319;VQSLOD=1.8575;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:26.23:0,26,1495	1/1:2,0:2:6.02:393,6,0	./.	0/0:9,0:2:6.02:0,6,184	1/1:20,0:20:9.03:575,9,0	0/0:10,0:10:18.53:0,19,1170	0/0:13,0:11:9:0,9,432	0/0:20,0:18:54.19:0,54,2364	1/1:24,0:24:27.56:1961,28,0	1/1:13,16:28:31.37:1800,31,0	1/1:4,14:16:3.01:234,3,0	0/0:17,0:17:21.54:0,22,960	0/0:9,0:9:18.03:0,18,1001	0/0:10,0:9:15.03:0,15,682	1/1:25,0:25:27.09:1947,27,0	1/1:13,0:12:9.50:659,10,0	0/0:33,0:32:90.31:0,90,8678	1/1:12,0:12:9.03:614,9,0	0/0:19,0:19:54.17:0,54,3240	0/0:6,0:6:4.99:0,5,362	0/0:46,0:41:30.09:0,30,2413	0/0:17,0:17:7.84:0,8,472	0/0:12,0:11:5.05:0,5,161	0/0:16,0:14:15.03:0,15,612	1/1:16,0:16:24.08:1614,24,0	0/0:32,0:30:74.29:0,74,5989	0/0:9,0:8:17.02:0,17,1087	0/0:6,0:5:3.01:0,3,388
chr10	94753918	.	T	TGC	639.66	PASS	AB=0.789;AC=18;AF=0.346;AN=52;BaseQRankSum=-0.643;DP=420;FS=33.429;HRun=0;HaplotypeScore=141.8512;InbreedingCoeff=0.6524;MQ=46.24;MQ0=18;MQRankSum=2.399;QD=5.47;ReadPosRankSum=-2.276;VQSLOD=1.2585;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:26:10.95:93,11,0	0/0:2,0:2:4.66:0,5,19	./.	./.	0/0:20,0:20:2.62:0,3,13	1/1:8,0:8:11.79:99,12,0	0/0:5,8:11:3.42:0,3,22	0/0:12,0:11:14.36:0,14,115	0/0:24,0:24:25.67:0,26,130	0/0:20,0:19:22.49:0,22,117	0/0:16,0:15:2.22:0,2,7	1/1:12,0:12:5.03:148,5,0	1/1:6,0:7:11.96:130,12,0	1/1:8,0:8:6.85:130,7,0	0/0:25,0:25:23.92:0,24,115	0/0:13,0:12:8.52:0,9,42	0/0:33,0:32:81.25:0,81,909	0/0:12,0:12:8.43:0,8,40	0/0:14,0:14:25.19:0,25,193	0/0:6,0:6:5.88:0,6,38	0/0:43,0:38:24.72:0,25,169	1/1:13,1:14:14.61:133,15,0	0/1:3,8:10:0:0,0,0	1/1:3,9:10:2.92:49,3,0	0/0:16,0:16:16.35:0,16,76	0/0:29,0:27:41.24:0,41,234	0/1:10,0:9:4.22:4,0,38	1/1:6,0:5:2.97:20,3,0
chr10	94754290	.	T	TA	8631.45	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-10.495;DP=663;FS=16.829;HRun=0;HaplotypeScore=63.2896;InbreedingCoeff=0.9997;MQ=87.46;MQ0=0;MQRankSum=-0.987;QD=42.73;ReadPosRankSum=2.656;VQSLOD=3.4118;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,1811	1/1:1,14:15:33.11:527,33,0	0/0:24,0:24:60.44:0,60,953	0/0:23,0:23:56.08:0,56,720	1/1:1,38:39:99:1710,108,0	0/0:19,0:19:57.19:0,57,797	0/0:36,0:36:99:0,102,1419	0/0:27,0:27:75.24:0,75,1021	1/1:0,25:25:72.25:1151,72,0	1/1:1,25:26:78.27:1232,78,0	1/1:0,20:20:48.16:752,48,0	0/0:25,0:25:75.25:0,75,1049	0/0:17,0:17:51.15:0,51,695	0/0:25,0:25:75.25:0,75,1048	1/1:0,24:24:66.23:1055,66,0	1/1:0,17:17:51.17:814,51,0	0/0:21,0:21:63.19:0,63,861	1/1:0,18:18:45.15:719,45,0	0/0:20,0:20:57.19:0,57,797	0/0:10,0:10:30.01:0,30,375	0/0:32,0:32:90.30:0,90,1257	0/0:25,0:25:75.24:0,75,1030	0/0:17,0:17:51.17:0,51,711	0/0:24,0:24:72.24:0,72,1007	1/1:1,17:18:42.14:671,42,0	0/0:30,1:31:45.33:0,45,1209	0/0:32,0:32:93.30:0,93,1284	0/0:9,0:9:27.09:0,27,373
chr10	94754472	.	AAAAAAC	A	4509.66	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.582;DP=580;FS=8.097;HRun=0;HaplotypeScore=129.0626;InbreedingCoeff=0.9916;MQ=71.94;MQ0=0;MQRankSum=-12.294;QD=38.54;ReadPosRankSum=0.064;VQSLOD=3.9879;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,129,3974	1/1:3,13:16:20.81:450,21,0	0/0:30,0:25:33.55:0,34,691	0/0:25,0:22:44.91:0,45,1157	1/1:6,15:21:42.07:786,42,0	0/0:23,0:23:63.22:0,63,2062	0/0:20,0:20:54.18:0,54,1640	0/0:23,0:23:60.20:0,60,1823	1/1:3,9:12:18.06:385,18,0	0/0:21,0:21:54.17:0,54,1531	0/0:18,0:18:36.12:0,36,997	0/0:23,0:23:54.19:0,54,1706	0/0:10,0:10:27.08:0,27,826	0/0:23,0:23:60.17:0,60,1753	1/1:1,16:17:39.13:834,39,0	1/1:1,15:16:33.11:706,33,0	0/0:36,0:36:99:0,99,2921	1/1:4,13:17:27.09:578,27,0	0/0:22,0:22:54.17:0,54,1505	0/0:20,0:20:45.15:0,45,1444	0/0:15,0:15:42.14:0,42,1308	0/0:22,0:22:57.20:0,57,1787	0/0:15,0:15:39.13:0,39,1268	0/0:21,0:21:57.20:0,57,1885	1/1:2,16:18:36.12:770,36,0	0/0:19,0:19:48.16:0,48,1496	0/0:21,0:21:51.18:0,51,1704	0/0:7,0:7:12.01:0,12,322
chr10	94757572	.	C	CT	3519.94	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=16.141;DP=620;FS=5.899;HRun=1;HaplotypeScore=122.8854;InbreedingCoeff=0.9965;MQ=87.72;MQ0=1;MQRankSum=-15.902;QD=27.94;ReadPosRankSum=3.682;VQSLOD=3.4401;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,16:20:54.11:573,54,0	0/0:8,0:8:24.08:0,24,336	0/0:23,0:23:66.16:0,66,880	0/0:28,0:28:83.59:0,84,1060	0/0:22,0:22:66.22:0,66,917	1/1:0,18:18:54.14:576,54,0	1/1:3,9:12:33.05:329,33,0	0/0:39,0:39:99:0,114,1577	0/0:26,0:26:78.26:0,78,1091	0/0:33,0:33:96.32:0,96,1339	0/0:12,0:12:36.12:0,36,503	1/1:1,19:20:60.13:623,60,0	1/1:0,12:12:36.02:365,36,0	1/1:1,10:11:31.32:318,31,0	0/0:36,0:36:99:0,105,1465	0/0:33,0:33:96.26:0,96,1304	0/0:23,0:23:63.21:0,63,880	0/0:34,0:34:99:0,102,1403	0/0:30,0:30:87.29:0,87,1212	0/0:25,0:25:75.24:0,75,1032	0/0:30,0:30:90.29:0,90,1240	1/1:1,7:7:21.06:232,21,0	1/1:2,6:8:16.80:150,17,0	1/1:1,16:17:20.65:355,21,0	0/0:27,0:27:81.26:0,81,1116	0/0:27,0:27:75.24:0,75,1033	0/0:21,0:21:63.20:0,63,862	0/0:17,0:17:51.17:0,51,713
chr10	94757576	.	G	GAACTTA	15286.19	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=17.798;DP=674;FS=12.996;HRun=0;HaplotypeScore=180.3045;InbreedingCoeff=0.9995;MQ=83.59;MQ0=1;MQRankSum=-18.999;QD=84.45;ReadPosRankSum=0.672;VQSLOD=5.6441;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,16:26:69.24:2085,69,0	0/0:8,0:8:24.08:0,24,615	0/0:22,0:22:63.08:0,63,1486	0/0:26,0:26:75.24:0,75,1711	0/0:21,0:21:63.22:0,63,1595	1/1:12,18:30:90.31:2850,90,0	1/1:11,9:20:57.18:1645,57,0	0/0:37,0:37:99:0,108,2542	0/0:26,0:26:78.25:0,78,1912	0/0:32,0:32:93.32:0,93,2367	0/0:13,0:13:36.12:0,36,913	1/1:8,19:27:75.26:2262,75,0	1/1:5,12:17:51.18:1553,51,0	1/1:7,10:17:51.17:1525,51,0	0/0:32,0:32:96.33:0,96,2457	0/0:33,0:33:99:0,99,2499	0/0:25,0:25:72.25:0,72,1794	0/0:32,0:32:93.24:0,93,2269	0/0:31,0:31:90.31:0,90,2219	0/0:23,0:23:69.24:0,69,1769	0/0:35,0:35:99:0,99,2335	1/1:5,6:10:30.10:941,30,0	1/1:6,6:12:30.10:911,30,0	1/1:5,15:21:56.84:1513,57,0	0/0:29,0:29:87.29:0,87,2080	0/0:28,0:28:77.96:0,78,1950	0/0:22,0:22:66.21:0,66,1563	0/0:18,0:18:54.16:0,54,1236
chr10	94757962	.	C	CTTTT	2475.24	PASS	AB=0.660;AC=22;AF=0.393;AN=56;BaseQRankSum=-5.154;DP=493;FS=1.854;HRun=12;HaplotypeScore=98.3582;InbreedingCoeff=0.6544;MQ=67.48;MQ0=0;MQRankSum=-3.745;QD=10.62;ReadPosRankSum=-2.772;VQSLOD=-0.1446;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:22:20.92:184,21,0	0/0:10,0:11:30.07:0,30,379	0/0:16,0:12:6.13:0,6,218	0/0:10,0:8:10.24:0,10,110	0/0:25,0:25:56.95:0,57,735	1/1:7,13:22:16.87:334,17,0	1/1:6,7:15:15.05:309,15,0	0/1:12,0:23:26.36:26,0,40	0/0:18,0:19:48.03:0,48,599	0/0:15,0:15:42.14:0,42,549	0/0:24,0:24:50.80:0,51,670	1/1:4,5:9:9.03:176,9,0	1/1:3,5:13:3.01:69,3,0	1/1:3,8:12:12.04:271,12,0	0/0:11,0:11:23.95:0,24,282	0/0:9,0:10:11.86:0,12,142	0/0:22,0:22:60.08:0,60,747	0/0:25,0:27:66.05:0,66,820	0/1:9,0:18:5.34:5,0,114	0/1:9,0:26:13.26:13,0,63	0/0:7,0:14:9.01:0,9,55	1/1:9,8:20:35.29:600,35,0	1/1:2,12:17:18.06:315,18,0	1/1:6,9:18:15.05:340,15,0	0/0:14,0:14:26.90:0,27,355	0/0:8,0:24:16.29:0,16,41	0/1:9,0:15:4.48:34,0,4	0/0:2,0:13:12.43:0,12,31
chr10	94758347	.	GGTTTT	G	6068.96	PASS	AB=0.846;AC=20;AF=0.357;AN=56;BaseQRankSum=-3.688;DP=502;FS=3.044;HRun=0;HaplotypeScore=109.9675;InbreedingCoeff=0.6766;MQ=64.30;MQ0=7;MQRankSum=-2.290;QD=29.60;ReadPosRankSum=2.806;VQSLOD=4.8262;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.14:0,45,1147	1/1:0,10:10:24.08:530,24,0	0/0:47,0:15:40.98:0,41,485	0/0:47,0:15:4.55:0,5,125	1/1:0,18:21:50.15:866,50,0	0/0:18,0:18:48.15:0,48,1052	0/0:16,0:16:39.11:0,39,784	0/0:24,0:22:38.90:0,39,256	1/1:0,12:12:18.06:371,18,0	1/1:0,20:21:58.64:974,59,0	1/1:1,11:12:26.91:395,27,0	0/0:7,0:7:21.04:0,21,338	0/0:9,0:9:27.06:0,27,444	0/0:12,0:12:29.97:0,30,432	1/1:0,14:16:27.08:515,27,0	1/1:0,11:12:33.11:691,33,0	0/0:16,0:16:42.08:0,42,1035	0/1:2,19:24:75.52:896,0,76	0/1:19,0:18:4.88:5,0,143	0/1:23,0:23:5.64:6,0,106	0/0:5,0:5:2.49:0,2,6	0/0:14,0:14:23.88:0,24,508	0/0:14,0:14:32.96:0,33,548	0/0:11,0:11:30.02:0,30,564	1/1:0,16:16:36.12:773,36,0	0/1:16,1:17:47.16:47,0,69	0/0:13,0:12:13.24:0,13,69	0/0:26,0:26:43.22:0,43,153
chr10	94758348	.	GTTTT	G	6083.92	PASS	AB=0.960;AC=32;AF=0.571;AN=56;BaseQRankSum=1.722;DP=508;FS=0.896;HRun=15;HaplotypeScore=102.4992;InbreedingCoeff=0.8582;MQ=64.08;MQ0=7;MQRankSum=-3.979;QD=18.84;ReadPosRankSum=3.961;VQSLOD=3.4166;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:16:45.11:0,45,821	1/1:10,0:10:24.02:224,24,0	0/0:48,1:15:16.23:0,16,230	0/1:47,0:15:1.48:1,0,115	1/1:21,0:21:26.03:367,26,0	0/0:8,0:19:48.14:0,48,713	0/0:6,0:15:33.09:0,33,431	1/1:6,18:22:46.54:594,47,0	1/1:12,0:12:17.87:146,18,0	1/1:21,0:21:40.33:344,40,0	1/1:12,0:12:13.82:111,14,0	0/0:4,0:7:14.93:0,15,150	0/0:5,0:9:20.81:0,21,209	0/0:5,0:12:14.97:0,15,186	1/1:16,0:16:27.04:274,27,0	1/1:12,0:12:33.04:314,33,0	0/0:13,0:18:36.10:0,36,677	0/1:23,0:24:26.31:376,0,26	1/1:8,12:19:33.20:413,33,0	1/1:2,20:23:58.37:764,58,0	1/1:0,5:5:6.02:82,6,0	0/0:4,0:14:29.90:0,30,316	0/0:4,0:14:23.99:0,24,277	0/0:5,0:11:24.07:0,24,297	1/1:16,0:15:35.79:315,36,0	1/1:6,13:17:41.95:536,42,0	1/1:1,12:12:24.03:327,24,0	1/1:3,23:26:66.19:895,66,0
chr10	94758537	.	C	CCAAAA	5983.62	PASS	AB=0.924;AC=28;AF=0.500;AN=56;BaseQRankSum=1.701;DP=386;FS=20.203;HRun=0;HaplotypeScore=124.7410;InbreedingCoeff=0.5131;MQ=64.56;MQ0=0;MQRankSum=-10.394;QD=29.77;ReadPosRankSum=3.534;VQSLOD=3.2506;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:10.43:12,0,10	1/1:0,4:4:9.03:272,9,0	0/0:19,0:12:32.40:0,32,525	0/0:21,0:19:19.91:0,20,374	1/1:1,14:16:32.92:712,33,0	0/1:15,0:15:28.89:29,0,32	0/1:12,0:12:15.20:15,0,80	0/0:33,0:33:87.24:0,87,1544	1/1:0,15:15:27.09:815,27,0	1/1:1,6:9:18.06:499,18,0	1/1:2,10:12:27.09:814,27,0	0/1:6,0:6:8.58:9,0,17	1/1:5,0:5:3:27,3,0	0/0:14,0:14:3.63:0,4,150	1/1:3,12:15:27.09:816,27,0	1/1:1,6:10:15.05:453,15,0	0/0:21,0:21:48.11:0,48,872	0/1:3,13:17:4.34:611,0,4	0/0:20,0:20:57.13:0,57,997	0/0:15,0:15:33.11:0,33,640	0/0:14,0:14:33.11:0,33,643	0/1:11,0:11:22.15:60,0,22	1/1:11,0:11:3.33:87,3,0	1/1:11,0:11:5.01:30,5,0	1/1:0,11:11:24.08:724,24,0	0/0:10,0:9:23.27:0,23,362	0/0:8,0:8:21.04:0,21,386	0/0:10,0:10:30.08:0,30,570
chr10	94758561	.	A	AT	4350.93	PASS	AB=0.994;AC=31;AF=0.554;AN=56;BaseQRankSum=-10.304;DP=339;FS=9.568;HRun=2;HaplotypeScore=67.9133;InbreedingCoeff=0.1335;MQ=63.66;MQ0=0;MQRankSum=6.730;QD=16.23;ReadPosRankSum=-4.200;VQSLOD=2.8705;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:6.35:0,6,15	1/1:7,0:7:2.21:65,2,0	0/0:9,0:6:5.42:0,5,86	0/1:10,0:8:5.57:6,0,41	0/1:12,0:12:8.95:39,0,9	0/1:9,0:9:9.95:27,0,10	1/1:5,0:5:0.15:23,0,0	1/1:3,37:40:99:1325,114,0	0/1:12,0:12:27.34:27,0,43	0/1:11,0:11:25.79:64,0,26	0/0:12,0:12:8.61:0,9,28	0/1:4,0:4:2.17:12,0,2	0/0:3,0:3:1.46:0,1,4	0/0:7,0:7:12.59:0,13,37	0/1:12,1:13:10.06:52,0,10	0/0:9,0:9:6.30:0,6,19	0/0:24,0:24:69.19:0,69,826	0/1:18,0:17:3.90:72,0,4	1/1:1,21:22:57.16:711,57,0	1/1:0,12:12:27.01:314,27,0	1/1:2,11:13:19.48:272,19,0	0/1:9,0:9:7.80:19,0,8	0/1:12,0:12:21.45:30,0,21	1/1:2,0:2:2.98:21,3,0	0/1:13,0:13:9.02:45,0,9	1/1:1,11:11:30.08:378,30,0	1/1:0,13:13:21:254,21,0	1/1:0,19:19:48.08:594,48,0
chr10	94758665	.	C	CT	2077.28	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-10.756;DP=322;FS=12.242;HRun=9;HaplotypeScore=53.0307;InbreedingCoeff=0.7916;MQ=66.59;MQ0=0;MQRankSum=0.904;QD=17.91;ReadPosRankSum=0.590;VQSLOD=2.5602;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:38.99:0,39,338	0/0:3,0:3:2.99:0,3,25	0/1:4,0:4:5.40:5,0,13	0/0:7,0:6:2.99:0,3,26	0/0:11,0:11:22.87:0,23,175	0/0:22,0:22:59.81:0,60,502	0/0:10,0:10:23.17:0,23,176	1/1:11,16:27:42.11:464,42,0	0/0:10,0:10:11.03:0,11,84	0/0:12,0:12:35.74:0,36,298	0/0:9,0:9:19.72:0,20,180	0/0:4,0:4:12:0,12,104	0/0:5,0:5:8.99:0,9,78	0/0:9,0:9:23.82:0,24,193	0/0:5,0:5:14.92:0,15,121	0/0:5,0:5:11.49:0,11,87	0/0:34,0:34:83.89:0,84,716	0/0:19,0:19:49.04:0,49,402	1/1:6,9:15:27.07:299,27,0	1/1:1,4:5:12.03:133,12,0	1/1:3,6:9:12.03:133,12,0	0/0:2,0:2:6:0,6,52	0/0:6,0:6:14.99:0,15,127	0/0:5,0:6:4.81:0,5,63	0/0:8,0:8:21:0,21,180	1/1:3,7:10:18.05:199,18,0	1/1:7,11:19:33.09:364,33,0	1/1:2,25:27:40.12:671,40,0
chr10	94758877	.	G	GTTT	2172.26	PASS	AB=0.770;AC=43;AF=0.768;AN=56;BaseQRankSum=0.790;DP=388;FS=1.729;HRun=14;HaplotypeScore=87.9725;InbreedingCoeff=0.1745;MQ=54.90;MQ0=6;MQRankSum=0.283;QD=6.75;ReadPosRankSum=-0.308;VQSLOD=-0.1148;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:36:28.12:122,28,0	0/1:6,0:5:1.19:46,0,1	0/0:16,0:8:7.83:0,8,41	0/0:15,0:9:2.54:0,3,32	1/1:12,0:11:4.69:39,5,0	0/1:11,0:17:6.55:91,0,7	0/1:8,0:13:43.72:44,0,45	1/1:27,2:27:34.65:334,35,0	1/1:12,0:12:10.30:72,10,0	0/1:3,0:7:13.18:13,0,50	1/1:0,0:6:6.33:27,6,0	1/1:4,0:7:7.14:33,7,0	1/1:2,0:11:5.86:13,6,0	1/1:0,0:7:7.61:33,8,0	1/1:7,0:7:1.16:25,1,0	1/1:4,0:4:3.24:20,3,0	0/0:33,0:31:49.93:0,50,470	1/1:16,0:16:12.45:46,12,0	1/1:21,0:20:27.40:276,27,0	1/1:9,1:11:21.93:193,22,0	1/1:13,0:13:16.48:84,16,0	0/1:3,0:9:12.98:22,0,13	1/1:6,0:7:3.84:22,4,0	0/1:9,0:13:15.95:45,0,16	0/1:5,0:5:2.14:46,0,2	1/1:7,1:11:17.91:225,18,0	1/1:9,5:14:17.74:169,18,0	1/1:6,2:23:22.27:283,22,0
chr10	94760191	.	AT	A	2420.06	PASS	AB=0.857;AC=20;AF=0.357;AN=56;BaseQRankSum=0.065;DP=484;FS=11.196;HRun=12;HaplotypeScore=74.7317;InbreedingCoeff=0.6818;MQ=67.92;MQ0=5;MQRankSum=3.810;QD=11.36;ReadPosRankSum=4.343;VQSLOD=2.2258;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,31:38:70.18:714,70,0	0/0:0,0:3:8.56:0,9,44	0/0:13,0:10:8.91:0,9,70	0/1:14,0:10:2.13:2,0,99	0/0:19,0:29:61.54:0,62,329	1/1:2,16:18:20.37:341,20,0	0/1:6,8:13:12.53:98,0,13	0/0:28,0:27:62.98:0,63,606	0/0:9,0:10:23.12:0,23,133	0/0:4,0:9:14.32:0,14,92	0/0:3,0:16:31.80:0,32,188	1/1:4,14:19:37.87:284,38,0	1/1:2,8:10:20.92:162,21,0	1/1:4,9:13:20.63:162,21,0	0/0:13,0:17:27.10:0,27,144	0/0:8,0:9:19.85:0,20,127	0/0:29,0:29:18.89:0,19,530	0/0:12,0:14:14.13:0,14,88	0/0:20,1:19:27.87:0,28,464	0/0:18,2:21:1.45:0,1,358	0/1:10,1:9:4.93:5,0,134	1/1:2,13:16:34.88:261,35,0	1/1:6,16:22:44.79:348,45,0	1/1:3,10:16:33:227,33,0	0/0:7,0:10:17.25:0,17,93	0/1:17,3:21:16.37:16,0,365	0/0:25,1:26:36.88:0,37,555	0/0:11,0:11:29.89:0,30,288
chr10	94760284	.	AG	A	289.69	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=6.637;DP=333;FS=2.024;HRun=1;HaplotypeScore=49.4138;InbreedingCoeff=0.8508;MQ=61.82;MQ0=10;MQRankSum=-5.413;QD=9.99;ReadPosRankSum=-1.403;VQSLOD=0.9194;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.03:0,81,1181	1/1:2,2:4:6.01:63,6,0	0/0:9,0:8:15.90:0,16,248	0/0:11,0:9:11.55:0,12,128	1/1:6,4:10:9.02:95,9,0	0/0:18,0:18:45.15:0,45,717	0/0:23,0:20:57.14:0,57,847	0/0:29,0:28:81.23:0,81,1200	1/1:1,5:5:12.03:127,12,0	0/0:5,0:5:15.05:0,15,240	0/0:8,0:8:17.98:0,18,256	0/0:8,0:8:21.07:0,21,332	0/0:8,0:8:24.08:0,24,371	0/0:15,1:16:39.13:0,39,608	1/1:1,2:3:3.01:32,3,0	1/1:1,3:4:6.02:64,6,0	0/0:36,0:34:77.05:0,77,1266	1/1:0,2:2:6.02:64,6,0	0/0:14,0:13:39.13:0,39,623	0/0:11,0:10:30.10:0,30,467	0/0:14,0:14:27.09:0,27,417	0/0:7,0:6:18.06:0,18,286	0/0:11,0:11:30.10:0,30,463	0/0:17,0:17:42.10:0,42,629	./.	0/0:21,0:20:60.07:0,60,856	0/0:7,0:7:15.05:0,15,239	./.
chr10	94760313	.	GT	G	982.24	PASS	AB=0.797;AC=17;AF=0.354;AN=48;BaseQRankSum=4.234;DP=328;FS=0.000;HRun=14;HaplotypeScore=45.3789;InbreedingCoeff=0.3030;MQ=75.73;MQ0=6;MQRankSum=2.110;QD=5.01;ReadPosRankSum=3.750;VQSLOD=1.0023;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,2:33:29.70:0,30,540	./.	0/1:28,0:13:13.27:13,0,36	0/1:23,1:14:16.08:16,0,64	./.	0/1:13,4:17:43.89:44,0,230	0/0:16,1:17:12.39:0,12,248	0/1:14,11:28:3.39:197,0,3	0/0:1,0:1:2.50:0,2,9	0/1:6,1:9:5.94:6,0,57	0/0:2,0:6:14.32:0,14,77	0/0:8,1:13:2.11:0,2,155	0/0:13,0:13:29.81:0,30,252	0/0:11,0:11:17.91:0,18,146	0/0:1,0:1:2.50:0,2,9	./.	1/1:6,18:25:26.96:314,27,0	0/0:1,0:1:2.50:0,2,9	0/1:4,7:13:3.42:100,0,3	0/1:4,5:9:29.15:29,0,44	1/1:4,6:9:14.85:103,15,0	0/0:6,0:6:18.02:0,18,167	0/0:11,0:11:27.03:0,27,251	0/0:16,0:16:23.16:0,23,233	./.	1/1:7,11:18:23.48:156,23,0	1/1:1,12:13:20.81:144,21,0	1/1:0,1:1:2.98:21,3,0
chr10	94760717	.	C	CAAAAA	4424.84	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=1.236;DP=437;FS=3.454;HRun=11;HaplotypeScore=137.9745;InbreedingCoeff=0.7665;MQ=48.82;MQ0=16;MQRankSum=-8.435;QD=16.51;ReadPosRankSum=-3.963;VQSLOD=1.2543;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:14:30.74:294,31,0	1/1:3,1:5:15.05:258,15,0	0/0:24,0:14:32.76:0,33,377	0/1:18,0:8:11.69:12,0,76	1/1:14,0:15:32.84:294,33,0	1/1:23,0:22:39.23:291,39,0	1/1:14,0:12:23.54:215,24,0	0/0:18,0:20:13.26:0,13,99	1/1:14,4:16:30.20:318,30,0	1/1:17,0:14:21.36:189,21,0	1/1:11,0:9:14.85:127,15,0	1/1:11,0:10:15.84:132,16,0	1/1:9,0:9:21.02:221,21,0	1/1:14,0:14:12.41:98,12,0	1/1:7,3:9:20.97:349,21,0	1/1:11,1:14:27.06:407,27,0	0/0:26,0:29:42.82:0,43,923	1/1:14,4:17:35.59:523,36,0	0/0:18,0:19:17.34:0,17,108	0/1:12,0:11:11.15:11,0,27	0/0:23,0:20:24.49:0,24,111	1/1:10,0:8:14.84:101,15,0	1/1:12,0:13:21.77:166,22,0	1/1:4,0:4:2.97:20,3,0	1/1:4,5:8:21.01:400,21,0	0/0:26,0:23:36.68:0,37,149	0/0:20,0:23:35.02:0,35,130	0/1:3,0:2:0.02:0,0,0
chr10	94760729	.	G	GAA	9587.59	PASS	AB=0.683;AC=45;AF=0.804;AN=56;BaseQRankSum=4.551;DP=469;FS=4.979;HRun=11;HaplotypeScore=114.4510;InbreedingCoeff=0.4069;MQ=53.82;MQ0=7;MQRankSum=-4.896;QD=24.90;ReadPosRankSum=-0.374;VQSLOD=4.2745;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,1:18:22.45:139,22,0	0/1:4,0:6:22.28:101,0,22	0/0:32,0:20:30.68:0,31,572	0/0:23,0:11:23.18:0,23,207	1/1:12,2:17:30.03:358,30,0	0/1:10,1:23:1.99:120,0,2	0/1:8,2:14:5.46:262,0,5	1/1:4,18:23:69.01:1024,69,0	1/1:16,1:17:34.03:428,34,0	1/1:9,1:22:42.41:607,42,0	1/1:6,2:11:22.88:231,23,0	0/1:5,1:8:23.16:85,0,23	1/1:2,0:8:1.74:124,2,0	0/1:6,1:13:35.57:85,0,36	1/1:8,0:10:24.01:271,24,0	1/1:7,2:11:22.11:221,22,0	0/0:29,0:28:42.47:0,42,1003	1/1:14,1:15:15.32:370,15,0	1/1:4,17:21:59.95:956,60,0	1/1:1,13:15:36.03:572,36,0	1/1:1,16:17:45.15:833,45,0	1/1:6,0:7:14.45:101,14,0	1/1:8,2:20:10.53:101,11,0	1/1:2,3:5:6.02:91,6,0	1/1:2,1:10:18.05:230,18,0	1/1:3,22:26:51.99:1198,52,0	1/1:6,18:26:63.04:1028,63,0	1/1:2,0:2:6:50,6,0
chr10	94761290	.	TCTGTCTCC	T	3620.32	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.526;DP=534;FS=3.390;HRun=0;HaplotypeScore=142.5345;InbreedingCoeff=0.9920;MQ=72.37;MQ0=3;MQRankSum=-10.625;QD=40.68;ReadPosRankSum=0.186;VQSLOD=3.6205;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:90.01:0,90,2976	1/1:0,12:12:27.01:625,27,0	0/0:38,0:29:54.15:0,54,1280	0/0:26,0:23:51.06:0,51,1636	1/1:12,8:19:27.05:424,27,0	0/0:16,0:16:30.07:0,30,901	0/0:28,0:28:63.20:0,63,2147	0/0:28,0:28:69.14:0,69,1814	1/1:3,8:11:27.08:534,27,0	0/0:31,0:31:87.25:0,87,2874	0/0:13,0:13:36.11:0,36,1103	0/0:10,0:10:30.09:0,30,1164	0/0:9,0:9:27.09:0,27,1011	0/0:12,0:12:27.08:0,27,1040	1/1:3,13:16:29.89:571,30,0	1/1:5,10:15:35.79:670,36,0	0/0:27,0:27:57.14:0,57,2107	1/1:6,5:11:24.06:555,24,0	0/0:24,0:23:36.08:0,36,973	0/0:11,0:11:24.08:0,24,874	0/0:26,0:26:66.19:0,66,2257	0/0:14,0:14:42.09:0,42,1254	0/0:15,0:15:36.10:0,36,1298	0/0:13,0:13:29.98:0,30,1067	1/1:0,4:4:12.04:241,12,0	0/0:25,0:25:60.13:0,60,2296	0/0:24,0:24:69.23:0,69,2773	0/0:15,0:15:27.09:0,27,1111
chr10	94761399	.	G	GCA	2130	PASS	AB=0.727;AC=13;AF=0.232;AN=56;BaseQRankSum=-7.163;DP=519;FS=3.617;HRun=0;HaplotypeScore=66.3705;InbreedingCoeff=0.8312;MQ=64.83;MQ0=11;MQRankSum=-1.650;QD=24.48;ReadPosRankSum=0.714;VQSLOD=4.0700;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:78.19:0,78,969	0/1:5,3:6:29.17:90,0,29	0/0:31,0:23:62.74:0,63,717	0/0:40,0:25:51.53:0,52,600	1/1:2,15:16:33.11:552,33,0	0/0:22,0:22:39.12:0,39,496	0/0:25,0:25:67.08:0,67,821	0/0:28,0:28:69.22:0,69,876	1/1:3,7:10:15.05:250,15,0	0/0:18,0:18:45.14:0,45,557	0/0:6,0:6:15.05:0,15,190	0/0:9,0:9:18.06:0,18,229	0/0:15,0:15:33.11:0,33,419	0/0:7,0:7:12.04:0,12,152	1/1:2,10:12:21.07:351,21,0	1/1:4,16:19:3.93:614,4,0	0/0:21,0:21:47.74:0,48,593	1/1:2,4:5:6.02:100,6,0	0/0:19,0:20:60.02:0,60,737	0/0:17,0:17:30.05:0,30,363	0/0:40,0:39:90.08:0,90,1106	0/0:18,0:18:45.13:0,45,559	0/0:10,0:10:27.07:0,27,329	0/0:22,0:21:45.10:0,45,553	1/1:4,10:13:21.06:351,21,0	0/0:17,0:16:33.10:0,33,419	0/0:15,0:14:33.07:0,33,387	0/0:13,0:12:24.07:0,24,295
chr10	94761908	.	C	CA	4263.07	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=5.032;DP=568;FS=4.305;HRun=1;HaplotypeScore=60.7372;InbreedingCoeff=0.9978;MQ=68.24;MQ0=0;MQRankSum=-0.350;QD=37.40;ReadPosRankSum=4.288;VQSLOD=5.3724;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,1456	1/1:0,9:9:24.08:357,24,0	0/0:14,0:13:30.37:0,30,334	0/0:9,0:8:17.82:0,18,196	1/1:0,25:25:68.94:920,69,0	0/0:16,0:16:45.12:0,45,553	0/0:21,0:21:63.12:0,63,776	0/0:29,0:29:84.01:0,84,1019	1/1:0,18:18:42.14:618,42,0	0/0:24,0:24:69.15:0,69,808	0/0:19,0:19:57.08:0,57,661	0/0:26,0:26:75.18:0,75,900	0/0:17,0:17:51.17:0,51,659	0/0:16,0:16:45.11:0,45,551	1/1:1,10:11:30.10:446,30,0	1/1:0,16:16:48.16:714,48,0	0/0:38,0:38:99:0,111,1383	1/1:1,19:20:48.16:716,48,0	0/0:19,0:19:54.16:0,54,676	0/0:17,0:17:48.12:0,48,580	0/0:12,0:12:36.07:0,36,412	0/0:14,0:14:39.05:0,39,436	0/0:25,0:25:74.76:0,75,882	0/0:23,0:23:69.16:0,69,823	1/1:0,15:15:33.11:492,33,0	0/0:28,0:28:84.23:0,84,1017	0/0:29,0:29:81.23:0,81,1006	0/0:16,0:16:48.16:0,48,619
chr10	94762055	.	TTTTG	T	5851.42	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-2.040;DP=515;FS=9.017;HRun=0;HaplotypeScore=116.3113;InbreedingCoeff=0.9737;MQ=60.12;MQ0=4;MQRankSum=-2.107;QD=24.79;ReadPosRankSum=3.121;VQSLOD=4.1149;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,21:30:51.09:792,51,0	1/1:4,0:4:9.02:94,9,0	0/0:40,0:26:29.18:0,29,401	0/0:31,0:16:15.04:0,15,272	1/1:15,0:15:21.01:243,21,0	1/1:4,11:15:21.07:351,21,0	1/1:2,11:13:27.09:451,27,0	0/0:32,0:32:66.17:0,66,1252	1/1:12,0:12:21.05:220,21,0	0/0:26,0:26:69.24:0,69,1600	0/0:10,0:10:21.05:0,21,455	1/1:1,13:14:30.10:501,30,0	1/1:5,10:15:18.06:301,18,0	1/1:2,8:10:21.07:351,21,0	1/1:14,0:14:21.05:220,21,0	1/1:10,0:10:18.04:188,18,0	0/0:22,0:22:51.17:0,51,1176	1/1:17,0:17:12.03:125,12,0	0/0:19,0:18:11.31:0,11,368	0/0:13,0:13:30.10:0,30,632	0/0:22,0:22:45.12:0,45,819	1/1:0,12:12:30.02:441,30,0	1/1:2,14:15:36.12:602,36,0	1/1:6,19:25:44.75:751,45,0	1/1:14,0:14:21.05:220,21,0	0/0:25,0:25:60.18:0,60,1256	0/0:26,0:26:69.19:0,69,1468	0/0:12,0:12:36.12:0,36,829
chr10	94762063	.	GTTTGTTTGTTTT	G	4514.89	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-3.310;DP=473;FS=19.770;HRun=0;HaplotypeScore=183.7662;InbreedingCoeff=0.9803;MQ=61.56;MQ0=3;MQRankSum=-8.643;QD=54.40;ReadPosRankSum=0.031;VQSLOD=3.0622;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:34.25:0,34,1293	1/1:0,5:5:9.50:329,10,0	0/0:28,0:19:34.38:0,34,920	0/0:21,0:13:21.53:0,22,542	1/1:1,13:14:32.98:717,33,0	0/0:13,0:13:21.07:0,21,505	0/0:14,0:14:33.11:0,33,828	0/0:27,0:27:72.23:0,72,2625	1/1:0,12:12:21.07:767,21,0	0/0:25,0:25:75.26:0,75,3843	0/0:10,0:10:24.08:0,24,1192	0/0:14,0:14:33.10:0,33,744	0/0:13,0:13:21.07:0,21,589	0/0:9,0:9:21.05:0,21,427	1/1:2,12:14:21.07:766,21,0	1/1:1,10:11:18.06:657,18,0	0/0:20,0:20:54.18:0,54,2696	1/1:1,14:15:15.05:477,15,0	0/0:19,0:18:32.28:0,32,899	0/0:15,0:15:42.14:0,42,1649	0/0:20,0:20:51.17:0,51,1840	0/0:12,0:12:27.06:0,27,697	0/0:14,0:13:36.12:0,36,913	0/0:23,0:23:48.64:0,49,1208	1/1:0,12:12:24.08:803,24,0	0/0:28,0:28:72.25:0,72,2916	0/0:25,0:25:75.22:0,75,3192	0/0:12,0:12:36.12:0,36,1889
chr10	94762218	.	C	CT	2776.18	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.868;DP=401;FS=4.018;HRun=0;HaplotypeScore=48.0447;InbreedingCoeff=0.9851;MQ=77.34;MQ0=0;MQRankSum=-1.839;QD=34.27;ReadPosRankSum=3.241;VQSLOD=3.2100;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.31:0,93,1300	1/1:0,3:3:9.03:135,9,0	0/0:13,0:13:39.09:0,39,524	0/0:19,0:19:51.11:0,51,654	1/1:0,9:9:24.08:360,24,0	0/0:15,0:15:39.13:0,39,542	0/0:21,0:21:60.20:0,60,838	0/0:20,0:20:51.16:0,51,699	1/1:0,15:15:27.09:405,27,0	0/0:15,0:15:45.13:0,45,584	0/0:7,0:7:21.06:0,21,276	0/0:12,0:12:33.06:0,33,422	0/0:8,0:8:24.08:0,24,335	0/0:9,0:9:27.02:0,27,333	1/1:0,10:10:27.09:406,27,0	1/1:0,8:8:21.07:315,21,0	0/0:20,0:20:60.20:0,60,839	1/1:0,26:25:66.21:991,66,0	0/0:10,0:10:27.09:0,27,378	0/0:8,0:8:24.06:0,24,317	0/0:34,0:34:99:0,99,1364	0/0:9,0:9:27.09:0,27,371	0/0:9,0:9:27.08:0,27,361	0/0:17,0:17:51.15:0,51,694	1/1:1,9:10:24.08:360,24,0	0/0:13,0:13:36.12:0,36,503	0/0:13,0:13:39.13:0,39,543	0/0:16,0:16:48.14:0,48,653
chr10	94762392	.	C	CT	2437.05	PASS	AB=0.732;AC=31;AF=0.554;AN=56;BaseQRankSum=-4.416;DP=275;FS=5.807;HRun=10;HaplotypeScore=47.6692;InbreedingCoeff=0.5789;MQ=62.24;MQ0=9;MQRankSum=-1.315;QD=16.81;ReadPosRankSum=-0.865;VQSLOD=3.5512;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,18:24:45.07:467,45,0	0/0:1,0:3:0.88:0,1,7	0/0:6,0:2:5.69:0,6,30	0/0:12,0:5:5.18:0,5,40	0/0:2,0:7:8.14:0,8,24	1/1:3,13:16:36.09:384,36,0	1/1:0,7:6:17.96:177,18,0	1/1:4,13:16:39.07:404,39,0	0/1:4,0:6:3.48:4,0,3	0/0:13,0:12:29.96:0,30,246	0/0:11,0:11:11.98:0,12,98	1/1:1,1:2:3.01:32,3,0	1/1:1,2:3:6.02:64,6,0	1/1:1,1:2:3.01:32,3,0	0/0:1,0:5:6.55:0,7,18	0/0:5,0:8:8.89:0,9,25	0/0:32,0:32:77.88:0,78,640	0/0:12,0:17:4.27:0,4,40	0/1:3,9:8:0.60:193,0,1	1/1:1,7:8:11.96:114,12,0	1/1:5,3:8:3.01:32,3,0	1/1:1,1:2:3.01:32,3,0	1/1:1,1:2:3.01:32,3,0	1/1:4,2:6:6.02:64,6,0	0/0:3,0:8:9.71:0,10,29	0/1:4,6:9:6.60:142,0,7	1/1:3,5:8:12.03:128,12,0	1/1:0,11:11:30.08:320,30,0
chr10	94762403	.	A	AT	196.35	PASS	AB=0.813;AC=7;AF=0.125;AN=56;BaseQRankSum=5.484;DP=248;FS=19.290;HRun=10;HaplotypeScore=47.9590;InbreedingCoeff=-0.0518;MQ=62.69;MQ0=9;MQRankSum=-4.853;QD=5.03;ReadPosRankSum=0.892;VQSLOD=0.1606;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:49.79:0,50,349	0/1:2,0:3:20.35:20,0,38	0/0:5,0:2:3.01:0,3,41	0/0:6,0:5:11.03:0,11,98	0/0:5,1:6:14.83:0,15,148	0/0:13,0:13:35.58:0,36,235	0/0:7,0:6:16.05:0,16,87	0/0:21,0:18:50.83:0,51,392	0/1:2,2:4:43.56:70,0,44	0/0:12,0:11:33.11:0,33,461	0/0:10,0:10:18.06:0,18,238	0/0:3,0:3:9:0,9,104	0/0:3,0:3:8.17:0,8,65	0/0:2,0:2:2.98:0,3,21	0/0:6,0:5:6.21:0,6,23	0/1:7,0:5:19.05:19,0,89	0/0:28,0:27:78.26:0,78,1088	0/1:11,3:13:99:177,0,116	0/0:12,0:9:26.86:0,27,256	0/0:11,0:10:16.75:0,17,139	0/0:3,0:2:2.97:0,3,20	0/0:2,0:2:5.98:0,6,62	1/1:1,0:1:0.89:2,1,0	0/0:2,0:2:5.46:0,5,29	0/1:7,1:6:23.44:23,0,133	0/0:14,0:13:35.97:0,36,397	0/0:5,0:5:10.45:0,10,63	0/0:14,0:14:41.11:0,41,339
chr10	94762434	.	TCATA	T	1746.52	PASS	AC=12;AF=0.240;AN=50;BaseQRankSum=5.040;DP=329;FS=22.945;HRun=0;HaplotypeScore=60.0193;InbreedingCoeff=0.8108;MQ=34.39;MQ0=87;MQRankSum=-4.219;QD=31.19;ReadPosRankSum=0.428;VQSLOD=1.4566;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:22:45.15:0,45,1198	1/1:0,6:6:12.04:232,12,0	./.	./.	1/1:0,13:13:11.99:232,12,0	0/0:14,0:14:33.11:0,33,903	0/0:8,0:2:6.02:0,6,164	0/0:31,0:13:30.10:0,30,766	1/1:0,5:5:12.04:232,12,0	0/0:12,0:12:36.12:0,36,959	0/0:8,0:8:18.06:0,18,492	0/0:11,0:10:21.07:0,21,574	0/0:4,0:3:6.02:0,6,164	0/0:9,0:8:15.05:0,15,409	./.	1/1:0,9:9:24.08:465,24,0	0/0:26,0:20:51.18:0,51,1395	1/1:8,9:9:24.08:465,24,0	0/0:25,0:16:48.16:0,48,1284	0/0:8,0:8:15.05:0,15,410	0/0:11,0:3:3.01:0,3,82	0/0:13,0:13:15.05:0,15,410	0/0:2,0:2:3.01:0,3,82	0/0:9,0:4:3:0,3,82	1/1:0,6:6:15.05:290,15,0	0/0:16,0:15:42.13:0,42,1028	0/0:4,0:3:9.03:0,9,246	0/0:9,0:9:18.06:0,18,493
chr10	94764609	.	T	TG	1015.03	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=1.426;DP=437;FS=0.000;HRun=1;HaplotypeScore=51.5463;InbreedingCoeff=0.7818;MQ=69.77;MQ0=52;MQRankSum=-1.713;QD=10.05;ReadPosRankSum=-0.235;VQSLOD=0.9673;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:41.97:0,42,389	0/0:6,0:6:17.93:0,18,141	0/0:49,0:14:20.39:0,20,163	0/0:54,0:15:6.54:0,7,89	0/0:10,0:7:17.96:0,18,146	0/0:14,0:12:28.14:0,28,209	0/0:15,0:15:31.75:0,32,243	1/1:13,0:12:18.53:234,19,0	0/0:8,0:7:17.96:0,18,146	0/0:14,0:13:35.13:0,35,278	0/0:9,0:9:11.64:0,12,107	0/0:14,0:13:31.37:0,31,205	0/0:6,0:6:9.62:0,10,64	0/0:17,0:15:34.65:0,35,267	0/0:11,0:9:23.96:0,24,198	0/0:9,0:8:23.92:0,24,193	0/0:25,0:24:47.88:0,48,388	0/0:7,0:7:20.96:0,21,170	1/1:11,5:9:5.19:114,5,0	1/1:8,0:8:14.72:143,15,0	0/1:13,0:10:9.50:115,0,9	0/0:11,0:10:20.84:0,21,163	0/0:11,0:10:19.65:0,20,127	0/0:15,0:15:2.43:0,2,147	0/0:9,0:8:23.89:0,24,189	1/1:18,1:17:20.63:270,21,0	1/1:17,1:18:32.84:283,33,0	1/1:14,0:10:5.25:32,5,0
chr10	94765789	.	AT	A	15402.30	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=3.119;DP=571;FS=3.789;HRun=5;HaplotypeScore=67.0598;InbreedingCoeff=0.9995;MQ=85.60;MQ0=1;MQRankSum=-7.054;QD=30.93;ReadPosRankSum=2.706;VQSLOD=5.6721;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:66.19:748,66,0	1/1:0,10:10:30.09:340,30,0	0/0:16,0:16:42.11:0,42,520	0/0:22,0:23:45.61:0,46,577	1/1:0,16:16:48.14:545,48,0	1/1:1,27:28:78.22:885,78,0	1/1:1,20:21:54.15:613,54,0	1/1:3,28:31:84.24:953,84,0	1/1:0,24:24:69.20:782,69,0	1/1:3,17:20:51.14:578,51,0	1/1:0,13:13:39.11:442,39,0	1/1:0,17:17:48.14:544,48,0	1/1:1,21:22:63.18:714,63,0	1/1:0,13:13:36.10:408,36,0	1/1:2,21:23:60.17:681,60,0	1/1:0,18:18:51.15:579,51,0	0/0:34,0:34:96.32:0,96,1313	1/1:0,11:11:33.09:374,33,0	1/1:0,19:19:57.16:646,57,0	1/1:1,20:21:54.15:613,54,0	1/1:2,17:19:42.12:476,42,0	1/1:1,18:19:51.15:578,51,0	1/1:0,12:12:33.09:374,33,0	1/1:1,18:19:51.14:579,51,0	1/1:0,18:18:48.14:544,48,0	1/1:0,28:28:84.22:943,84,0	1/1:0,22:22:63.18:714,63,0	1/1:0,25:25:66.19:749,66,0
chr10	94766015	.	GA	G	509.27	PASS	AB=0.809;AC=22;AF=0.393;AN=56;BaseQRankSum=-2.814;DP=507;FS=2.567;HRun=16;HaplotypeScore=76.4635;InbreedingCoeff=0.4393;MQ=67.77;MQ0=15;MQRankSum=4.909;QD=2.26;ReadPosRankSum=5.384;VQSLOD=-0.6230;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:20:10.55:30,11,0	1/1:5,1:6:2.86:18,3,0	0/0:28,0:10:8.59:0,9,52	0/0:37,0:19:14.89:0,15,112	0/1:16,3:19:13.58:40,0,14	0/0:25,0:23:45.41:0,45,254	0/0:18,0:18:26.39:0,26,152	0/1:22,11:34:99:140,0,104	0/1:14,3:16:8:80,0,8	0/0:7,0:14:20.64:0,21,121	0/0:11,0:11:17.45:0,17,105	0/0:17,0:17:23.25:0,23,139	0/0:15,0:15:32.77:0,33,182	0/0:9,0:9:14.37:0,14,78	1/1:13,2:15:1.38:42,1,0	1/1:8,7:15:20.24:149,20,0	0/0:33,2:35:30.95:0,31,415	0/0:12,0:11:2.84:0,3,14	1/1:5,0:11:10.60:39,11,0	1/1:14,1:18:0.59:11,1,0	0/1:10,0:9:1.84:18,0,2	0/0:15,0:15:22.35:0,22,123	0/0:21,1:21:15.38:0,15,59	0/0:22,0:22:18.24:0,18,106	0/1:12,3:14:27.97:49,0,28	0/1:10,1:16:2.61:20,0,3	1/1:11,0:14:11.98:36,12,0	1/1:9,0:9:2.70:16,3,0
chr10	94766032	.	CCACACACACACACACA	C	1693.52	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=0.917;DP=478;FS=10.719;HRun=0;HaplotypeScore=171.9441;InbreedingCoeff=0.6250;MQ=47.49;MQ0=26;MQRankSum=-3.891;QD=15.26;ReadPosRankSum=-0.311;VQSLOD=1.5523;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:14.83:0,15,947	0/0:4,0:6:5.98:0,6,229	0/0:23,0:6:0.75:0,1,2	0/0:24,0:6:5.94:0,6,41	0/0:13,0:14:15.05:0,15,868	0/0:18,0:18:15.05:0,15,1028	0/0:15,0:15:6.02:0,6,302	1/1:23,0:23:5.35:76,5,0	0/0:12,0:12:9.03:0,9,600	0/0:16,0:16:24.54:0,25,1081	0/0:15,0:14:9.50:0,10,581	0/0:7,0:14:9.02:0,9,623	0/0:11,0:11:9.03:0,9,341	0/0:12,0:13:3.01:0,3,209	0/0:10,0:17:6.02:0,6,372	0/0:15,0:15:9.03:0,9,614	0/0:35,0:33:36.12:0,36,2409	0/0:15,0:12:17.86:0,18,897	1/1:10,0:9:2.87:15,3,0	1/1:15,0:16:20.89:383,21,0	1/1:16,0:12:2.93:20,3,0	0/0:6,0:9:3.01:0,3,208	0/0:19,0:18:6.02:0,6,403	0/0:15,0:20:3.01:0,3,204	0/0:15,0:16:9.03:0,9,501	1/1:17,6:19:18.06:723,18,0	1/1:10,4:14:8.95:375,9,0	1/1:4,4:8:6.02:263,6,0
chr10	94766558	.	CTGCTTTTCTGCA	C	17287.46	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.637;DP=576;FS=5.409;HRun=0;HaplotypeScore=208.1985;InbreedingCoeff=0.9944;MQ=85.91;MQ0=0;MQRankSum=-17.447;QD=94.47;ReadPosRankSum=4.396;VQSLOD=4.2902;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:60.16:2261,60,0	0/0:7,0:7:21.07:0,21,1274	0/0:18,0:18:54.17:0,54,2845	0/0:26,0:26:75.26:0,75,3999	0/0:25,0:25:69.24:0,69,4103	1/1:0,15:15:42.14:1660,42,0	1/1:0,18:18:45.15:1781,45,0	0/0:32,0:32:96.33:0,96,5615	0/0:20,0:20:60.21:0,60,3479	1/1:1,20:21:63.22:2378,63,0	1/1:0,10:10:12.04:473,12,0	1/1:0,15:15:42.14:1663,42,0	1/1:0,17:17:42.14:1662,42,0	1/1:0,19:19:48.16:1900,48,0	0/0:23,0:23:69.24:0,69,4227	0/0:22,0:21:66.23:0,66,4067	0/0:29,0:29:87.27:0,87,4651	0/0:28,0:28:84.25:0,84,4925	0/0:26,0:26:78.26:0,78,3961	0/0:21,0:21:63.22:0,63,3915	0/0:47,0:47:99:0,141,8702	1/1:0,15:15:39.13:1507,39,0	1/1:0,14:14:24.08:949,24,0	1/1:0,13:13:27.09:1054,27,0	0/0:17,0:17:48.16:0,48,2908	0/0:21,0:21:63.22:0,63,3725	0/0:22,0:22:66.23:0,66,3981	0/0:9,0:9:27.08:0,27,1367
chr10	94767841	.	G	GCACACACACACACACA	19837.77	PASS	AB=1.000;AC=46;AF=0.852;AN=54;BaseQRankSum=5.683;DP=586;FS=1.972;HRun=0;HaplotypeScore=316.0045;InbreedingCoeff=0.3865;MQ=56.61;MQ0=1;MQRankSum=-6.920;QD=38.59;ReadPosRankSum=-1.132;VQSLOD=3.5874;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:2.68:48,3,0	1/1:11,1:13:24.08:1089,24,0	0/0:31,0:25:13.07:0,13,786	0/1:34,0:27:2.87:3,0,735	1/1:14,0:14:8.78:117,9,0	1/1:9,0:8:2.70:93,3,0	1/1:32,0:32:21.50:556,21,0	1/1:26,0:26:48.09:1435,48,0	1/1:17,1:18:26.74:1098,27,0	1/1:23,0:22:57.19:1906,57,0	./.	1/1:22,0:21:36.06:1307,36,0	1/1:19,0:18:26.81:958,27,0	1/1:22,0:22:26.96:845,27,0	1/1:15,1:17:29.66:1113,30,0	1/1:13,3:16:28.79:1413,29,0	0/0:35,0:37:86.30:0,86,3219	1/1:15,13:30:24.08:1489,24,0	0/1:20,0:19:16.23:1056,0,16	1/1:16,0:17:1.94:181,2,0	0/1:44,0:43:27.07:92,0,27	1/1:12,0:12:2.77:69,3,0	0/1:6,0:6:0:0,0,0	1/1:25,0:25:2.74:131,3,0	1/1:6,0:18:5.74:238,6,0	1/1:32,0:32:51.17:2171,51,0	1/1:18,0:18:50.83:1736,51,0	1/1:8,0:8:21.03:696,21,0
chr10	94767859	.	ACGCACGCACGCAAGTGTGCGCACGCACGCACGCACG	A	6567.74	PASS	AB=0.952;AC=22;AF=0.393;AN=56;BaseQRankSum=0.514;DP=613;FS=11.930;HRun=0;HaplotypeScore=499.9558;InbreedingCoeff=-0.6756;MQ=43.56;MQ0=5;MQRankSum=-3.986;QD=13.68;ReadPosRankSum=0.693;VQSLOD=1.1710;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:37.99:38,0,72	0/1:10,0:10:99:290,0,528	0/0:33,0:18:16.02:0,16,1122	0/0:30,0:19:9.21:0,9,1475	0/1:13,0:13:35.93:36,0,949	0/1:11,0:10:53.23:53,0,230	0/1:34,0:34:99:490,0,533	0/1:20,11:31:99:532,0,1939	0/1:22,0:23:99:370,0,1893	0/1:25,0:24:99:828,0,1749	0/0:6,0:5:6.01:0,6,58	0/1:27,0:26:99:300,0,861	0/1:18,0:16:99:493,0,261	0/1:21,0:21:99:419,0,266	0/1:20,0:19:99:365,0,1397	0/1:17,0:18:99:329,0,1270	0/0:36,0:36:99:0,105,8275	0/1:21,0:21:6.64:7,0,3580	0/1:17,8:20:99:395,0,1083	0/1:15,5:20:40.81:41,0,196	0/1:60,0:59:13.88:14,0,111	0/1:13,0:13:46.83:67,0,47	0/0:7,0:7:14.49:0,14,205	0/0:21,0:21:1.20:0,1,42	0/1:11,0:11:99:163,0,403	0/1:22,16:38:99:298,0,2566	0/1:20,0:20:99:617,0,613	0/1:8,0:8:99:424,0,277
chr10	94767871	.	AAGTGTG	A	3851.68	PASS	AB=0.826;AC=19;AF=0.339;AN=56;BaseQRankSum=4.721;DP=544;FS=7.798;HRun=0;HaplotypeScore=261.6273;InbreedingCoeff=-0.5321;MQ=42.54;MQ0=5;MQRankSum=-6.043;QD=9.63;ReadPosRankSum=3.654;VQSLOD=1.3936;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:5:6.02:0,6,69	0/1:6,3:10:99:355,0,417	0/0:23,0:9:23.40:0,23,437	0/0:23,0:12:30.54:0,31,748	0/0:8,2:10:14.55:0,15,563	0/1:7,1:8:56.61:57,0,132	0/1:16,6:24:99:272,0,368	0/1:33,1:35:6.79:7,0,1404	0/1:19,3:22:99:327,0,1054	0/1:17,1:22:99:258,0,1159	0/0:3,0:4:5.97:0,6,44	0/1:20,5:26:99:265,0,474	0/1:8,6:14:99:319,0,199	0/1:11,6:18:99:314,0,230	0/1:17,1:18:99:187,0,1041	0/1:10,6:17:99:410,0,520	0/0:32,0:32:96.33:0,96,3429	0/0:24,0:24:63.52:0,64,1862	0/1:23,0:20:74.49:74,0,406	0/1:21,1:23:56.02:56,0,158	0/1:46,6:54:6.24:6,0,74	0/1:10,4:14:62.48:62,0,80	0/0:9,0:9:19.82:0,20,208	0/0:8,6:14:2.10:0,2,33	0/1:10,1:11:99:109,0,324	0/1:36,1:37:17.06:17,0,848	0/1:6,6:16:99:559,0,159	0/1:2,0:6:72.74:196,0,73
chr10	94767876	.	TGC	T	750.46	PASS	AB=0.934;AC=18;AF=0.321;AN=56;BaseQRankSum=8.337;DP=546;FS=3.695;HRun=0;HaplotypeScore=250.1798;InbreedingCoeff=-0.3384;MQ=42.20;MQ0=7;MQRankSum=-6.246;QD=2.07;ReadPosRankSum=2.304;VQSLOD=2.5887;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:1.77:0,2,4	0/1:10,0:10:20.99:21,0,200	0/0:21,0:6:12:0,12,141	0/0:25,0:8:8.94:0,9,218	0/0:10,0:10:14.57:0,15,278	0/1:8,0:8:13.70:14,0,31	0/1:24,0:24:50.99:51,0,53	0/1:32,3:35:13.89:14,0,374	0/1:25,0:25:29.94:30,0,585	0/0:22,0:22:8.94:0,9,261	0/0:4,0:4:0.44:0,0,1	0/1:27,0:26:84.83:85,0,106	0/1:15,0:14:45.01:45,0,81	0/1:18,0:18:29.84:73,0,30	0/0:18,0:18:2.67:0,3,546	0/1:18,0:18:25.19:25,0,320	0/0:30,0:30:84.27:0,84,1428	0/0:25,0:25:65.95:0,66,1077	0/1:18,5:20:83.20:83,0,101	0/1:15,8:23:18.56:83,0,19	1/1:43,9:52:0.46:25,0,0	0/1:14,0:14:2.92:3,0,30	0/0:9,0:9:10.35:0,10,38	0/0:14,0:14:0.33:0,0,1	0/1:11,0:11:4.09:4,0,194	0/1:28,9:37:99:189,0,161	0/1:12,4:16:27.76:97,0,28	0/1:5,1:6:6.41:53,0,6
chr10	94767878	.	C	CACAA	4786.56	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=5.956;DP=574;FS=37.430;HRun=0;HaplotypeScore=273.0081;InbreedingCoeff=0.5972;MQ=41.54;MQ0=7;MQRankSum=-10.007;QD=13.56;ReadPosRankSum=-5.929;VQSLOD=2.2676;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,4:10:11.87:96,12,0	0/0:10,0:10:8.60:0,9,234	0/0:22,0:5:12.04:0,12,149	0/0:24,0:8:19.53:0,20,225	0/0:10,0:10:14.63:0,15,308	1/1:3,7:10:23.79:309,24,0	1/1:21,7:28:61.98:647,62,0	0/1:33,0:33:36.87:37,0,81	0/0:24,0:24:34.67:0,35,790	1/1:15,7:24:31.16:1243,31,0	1/1:2,2:4:6.02:74,6,0	1/1:16,15:30:58.97:943,59,0	1/1:12,7:18:28.74:509,29,0	1/1:16,5:22:37.61:382,38,0	0/0:18,0:18:34.05:0,34,693	0/0:18,0:18:7.94:0,8,420	0/0:28,0:28:84.27:0,84,1507	0/0:26,0:26:65.95:0,66,1224	0/1:23,0:20:13.77:14,0,39	0/0:23,0:23:0.80:0,1,18	0/1:52,0:52:2.69:3,0,7	1/1:7,9:16:9.25:261,9,0	1/1:3,8:11:20.65:194,21,0	1/1:12,5:17:6.23:39,6,0	0/0:11,0:11:20.61:0,21,330	0/1:37,0:37:35.47:35,0,115	0/1:16,0:16:1.50:2,0,55	0/0:7,0:6:8.95:0,9,33
chr10	94767881	.	ACGCACG	A	1297.55	PASS	AB=0.922;AC=18;AF=0.321;AN=56;BaseQRankSum=6.631;DP=585;FS=0.536;HRun=0;HaplotypeScore=297.9736;InbreedingCoeff=-0.1068;MQ=41.46;MQ0=8;MQRankSum=-4.432;QD=3.56;ReadPosRankSum=0.495;VQSLOD=1.9923;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:0.30:0,0,0	0/0:10,0:10:9.64:0,10,464	0/0:19,0:4:8.99:0,9,146	0/0:25,0:8:3.50:0,4,258	0/0:10,0:10:14.55:0,15,518	0/1:11,0:11:0.42:0,0,116	0/1:29,0:29:4.35:4,0,147	0/1:30,3:33:99:155,0,160	0/0:24,0:24:52.74:0,53,1406	0/1:24,0:24:23.16:23,0,1017	0/1:4,0:4:0:0,0,0	0/1:32,0:31:7.53:8,0,451	0/1:18,0:17:3.25:3,0,250	0/1:23,0:23:8.50:9,0,251	0/0:19,0:19:43.24:0,43,1346	0/0:19,0:19:40.14:0,40,922	0/0:27,0:27:78.21:0,78,2163	0/0:28,0:28:71.94:0,72,2249	0/1:18,5:20:44.80:284,0,45	0/1:13,10:23:22.02:199,0,22	1/1:44,9:53:2.80:89,3,0	0/0:16,0:16:6.12:0,6,131	0/0:12,0:12:3.83:0,4,60	1/1:19,0:19:2.66:6,3,0	0/0:12,0:12:22.65:0,23,684	0/1:28,9:37:36.23:465,0,36	0/1:12,4:16:76.51:138,0,77	0/1:6,1:6:19.25:53,0,19
chr10	94767899	.	A	ACGCG	378.56	PASS	AB=0.987;AC=10;AF=0.179;AN=56;BaseQRankSum=6.398;DP=656;FS=15.948;HRun=0;HaplotypeScore=307.4172;InbreedingCoeff=0.0127;MQ=38.63;MQ0=13;MQRankSum=-5.672;QD=1.39;ReadPosRankSum=-1.298;VQSLOD=0.3248;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:8.54:0,9,152	0/0:7,0:6:15.02:0,15,244	0/0:19,0:4:6.01:0,6,110	0/0:26,0:5:12.03:0,12,174	0/0:10,0:10:23.52:0,24,409	0/0:12,0:12:5.02:0,5,20	0/1:26,0:26:3.91:28,0,4	0/1:41,0:39:99:292,0,781	0/0:22,0:21:42.58:0,43,750	0/0:26,0:25:10.37:0,10,345	0/1:6,0:6:0.05:0,0,0	0/0:34,0:32:4.48:0,4,130	0/1:20,0:19:33.91:34,0,142	0/1:25,0:25:15.65:16,0,89	0/0:27,0:26:58.08:0,58,1061	0/0:16,0:16:32.35:0,32,566	0/0:26,0:26:72.25:0,72,1380	0/0:34,0:34:85.72:0,86,1448	0/0:32,0:29:34.53:0,35,510	0/0:23,0:23:18.65:0,19,232	0/1:78,4:80:24.21:24,0,482	0/0:17,0:17:8.56:0,9,92	0/0:17,0:17:3.37:0,3,40	1/1:23,0:23:1.68:27,2,0	0/0:12,0:12:27.09:0,27,484	0/1:34,0:34:69.59:70,0,498	0/1:15,0:16:21.52:22,0,167	0/0:5,0:4:9.03:0,9,139
chr10	94767911	.	G	GCA	2283.86	PASS	AB=0.554;AC=18;AF=0.321;AN=56;BaseQRankSum=6.544;DP=638;FS=20.351;HRun=0;HaplotypeScore=222.8113;InbreedingCoeff=0.8362;MQ=43.29;MQ0=20;MQRankSum=-4.359;QD=12.15;ReadPosRankSum=0.695;VQSLOD=2.0877;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:11.23:0,11,153	0/0:9,0:7:14.93:0,15,175	0/0:26,0:7:5.88:0,6,116	0/0:33,0:7:14.06:0,14,145	0/0:13,0:13:27.07:0,27,330	1/1:2,7:9:5.38:100,5,0	1/1:3,18:21:2.95:50,3,0	0/0:29,0:27:65.84:0,66,804	0/0:26,0:25:51.04:0,51,589	1/1:7,17:23:52.25:728,52,0	0/1:2,5:7:0.07:0,0,0	1/1:11,18:28:26.74:444,27,0	1/1:7,11:17:30.09:471,30,0	1/1:2,18:20:17.59:288,18,0	0/0:27,0:26:66.21:0,66,846	0/0:16,0:16:27.03:0,27,328	0/0:29,0:29:81.24:0,81,1014	0/0:40,0:39:97.55:0,98,1132	0/0:27,0:24:41.73:0,42,545	0/0:14,0:14:24.01:0,24,277	0/0:87,0:84:55.44:0,55,609	1/1:5,13:18:17.99:289,18,0	1/1:2,18:20:5.26:100,5,0	0/1:2,19:21:0.05:0,0,0	0/0:15,0:15:30.08:0,30,371	0/0:22,0:22:54.64:0,55,669	0/0:12,0:12:18.48:0,18,204	0/0:7,0:5:9.03:0,9,113
chr10	94767991	.	G	GCA	13190.61	PASS	AB=1.000;AC=37;AF=0.740;AN=50;BaseQRankSum=0.037;DP=739;FS=14.196;HRun=0;HaplotypeScore=149.7421;InbreedingCoeff=0.6395;MQ=52.38;MQ0=7;MQRankSum=4.348;QD=23.26;ReadPosRankSum=3.303;VQSLOD=4.8834;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:0:0,0,0	1/1:0,11:11:28.34:458,28,0	0/0:44,0:22:16.89:0,17,472	0/0:47,0:19:27.03:0,27,325	1/1:4,20:24:45.15:754,45,0	./.	1/1:18,1:19:3:47,3,0	1/1:26,0:25:60.09:684,60,0	1/1:1,23:24:51.17:858,51,0	0/1:21,0:20:9.09:60,0,9	./.	0/1:27,0:27:0.05:0,0,0	1/1:17,0:16:0.99:30,1,0	0/1:5,0:5:0:0,0,0	1/1:11,12:22:39.13:644,39,0	1/1:4,15:19:24.08:405,24,0	0/0:32,0:32:81.18:0,81,1000	1/1:14,22:35:78.20:1293,78,0	1/1:19,0:19:36.10:435,36,0	1/1:15,0:15:36.11:434,36,0	1/1:161,0:158:99:3939,328,0	./.	0/0:8,0:8:0:0,0,0	0/1:17,0:17:0:0,0,0	1/1:5,27:32:30.66:1074,31,0	1/1:24,1:25:69.20:853,69,0	1/1:16,0:15:45.15:596,45,0	1/1:19,0:19:51.16:625,51,0
chr10	94767994	.	CACACACATGCATGCACACATACACAT	C	2548.77	PASS	AB=0.899;AC=13;AF=0.250;AN=52;BaseQRankSum=-0.438;DP=759;FS=3.602;HRun=0;HaplotypeScore=425.5649;InbreedingCoeff=0.6329;MQ=52.49;MQ0=10;MQRankSum=-4.476;QD=17.95;ReadPosRankSum=-2.381;VQSLOD=0.0915;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:0:0,0,0	0/0:11,0:11:27.03:0,27,1517	0/0:49,0:23:60.12:0,60,2285	0/0:48,0:19:27.98:0,28,1980	0/0:24,0:24:24.40:0,24,3335	./.	1/1:20,0:20:2.67:70,3,0	0/0:25,0:24:55.37:0,55,2576	0/0:24,0:24:49.75:0,50,3177	1/1:25,0:24:49.05:2148,49,0	0/1:6,0:6:0.05:0,0,0	0/1:5,21:26:0:0,0,0	1/1:2,15:16:9.03:433,9,0	1/1:5,0:5:0.47:1,0,0	0/0:23,0:22:45.08:0,45,3030	0/0:19,0:19:25.71:0,26,1500	0/0:33,0:33:84.24:0,84,6397	0/0:36,0:36:55.82:0,56,5348	0/1:20,0:18:22.84:23,0,1507	0/0:15,0:15:36.10:0,36,2721	0/0:169,0:166:99:0,326,23163	./.	0/1:7,0:7:0:0,0,0	0/1:15,1:16:0.11:0,0,0	0/0:34,0:34:78.27:0,78,5557	0/0:28,0:28:49.27:0,49,4863	0/0:17,0:16:45.15:0,45,3965	0/0:19,0:19:51.18:0,51,3543
chr10	94767999	.	A	ACG	14787.69	PASS	AB=1.000;AC=30;AF=0.577;AN=52;BaseQRankSum=-7.263;DP=749;FS=10.186;HRun=0;HaplotypeScore=129.6496;InbreedingCoeff=0.4411;MQ=51.66;MQ0=11;MQRankSum=5.026;QD=27.64;ReadPosRankSum=6.956;VQSLOD=5.5891;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:7:0:0,0,0	1/1:12,0:12:27.01:236,27,0	0/0:47,0:24:53.07:0,53,702	0/0:44,0:16:32.11:0,32,439	1/1:24,0:24:23.01:365,23,0	./.	0/1:18,0:18:13.97:14,0,28	1/1:3,26:28:74.97:1204,75,0	0/1:26,0:26:7.87:399,0,8	0/0:24,0:23:27.67:0,28,239	0/0:5,0:5:0:0,0,0	0/0:24,0:24:2.98:0,3,22	0/1:16,0:15:3.11:3,0,47	0/1:5,0:5:0.06:0,0,0	0/1:24,0:23:55.44:266,0,55	1/1:18,0:18:2.06:192,2,0	0/0:32,0:32:87.26:0,87,1267	1/1:35,0:34:36.09:642,36,0	1/1:5,15:19:50.97:779,51,0	1/1:1,16:17:36.09:692,36,0	1/1:8,159:164:99:6285,328,0	./.	0/0:5,0:5:0:0,0,0	0/1:14,0:14:0.11:0,0,0	0/1:36,0:36:42.57:496,0,43	1/1:3,27:30:64.14:1379,64,0	1/1:0,18:17:45.15:855,45,0	1/1:0,18:18:51.17:980,51,0
chr10	94768001	.	ATG	A	768.05	PASS	AB=0.724;AC=12;AF=0.250;AN=48;BaseQRankSum=3.378;DP=717;FS=9.217;HRun=0;HaplotypeScore=167.0557;InbreedingCoeff=0.5731;MQ=51.77;MQ0=11;MQRankSum=-4.112;QD=6.86;ReadPosRankSum=-5.414;VQSLOD=1.0252;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	./.	0/0:11,0:11:23.07:0,23,263	0/0:47,0:23:52.58:0,53,962	0/0:42,1:16:40.65:0,41,725	0/0:23,0:23:3.34:0,3,416	./.	1/1:4,13:17:2.96:47,3,0	0/0:28,1:28:44.52:0,45,1045	0/0:24,0:24:25.28:0,25,515	1/1:4,17:20:45.16:643,45,0	0/1:1,3:4:0.03:0,0,0	./.	1/1:15,0:14:9.02:122,9,0	0/1:1,4:5:0:1,0,0	0/0:23,0:22:56.67:0,57,660	0/1:17,0:17:0.17:0,0,212	0/0:30,0:30:87.25:0,87,1663	0/0:27,6:32:9.92:0,10,660	0/1:18,0:16:79.36:79,0,440	0/0:18,0:18:41.73:0,42,564	0/0:162,0:159:99:0,293,4394	./.	0/1:1,3:4:0:0,0,0	0/1:5,6:11:0:0,0,0	0/0:35,0:35:87.12:0,87,961	0/0:30,0:30:46.98:0,47,1121	0/0:18,0:17:45.14:0,45,575	0/0:19,0:19:54.17:0,54,734
chr10	94768005	.	ATG	A	77.93	PASS	AB=1.000;AC=10;AF=0.208;AN=48;BaseQRankSum=7.571;DP=729;FS=4.619;HRun=0;HaplotypeScore=174.5593;InbreedingCoeff=0.7260;MQ=51.53;MQ0=10;MQRankSum=-5.764;QD=0.95;ReadPosRankSum=-0.732;VQSLOD=2.5534;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:11,0:11:30.10:0,30,595	0/0:48,0:25:39.90:0,40,1012	0/0:42,1:19:54.13:0,54,954	0/0:19,0:19:47.89:0,48,958	./.	0/1:18,0:18:0.37:0,0,0	0/0:30,0:29:87.29:0,87,1649	0/0:23,0:23:59.86:0,60,1154	1/1:22,0:21:8.44:142,8,0	0/1:3,0:3:0:0,0,0	./.	1/1:15,0:14:7.89:35,8,0	0/1:6,0:6:0:1,0,0	0/0:25,0:24:60.17:0,60,1186	0/0:16,0:16:26.88:0,27,497	0/0:31,0:31:90.31:0,90,1723	0/0:32,1:33:56.39:0,56,1566	0/0:16,0:13:39.13:0,39,770	0/0:19,0:19:45.15:0,45,897	0/0:163,0:162:99:0,363,7000	./.	1/1:5,0:5:0.47:2,0,0	0/1:13,0:13:0:0,0,0	0/0:36,0:36:93.32:0,93,1835	0/0:30,0:30:90.04:0,90,1692	0/0:20,0:19:51.18:0,51,1032	0/0:21,0:21:60.20:0,60,1157
chr10	94768012	.	CAT	C	224.32	PASS	AB=0.655;AC=7;AF=0.146;AN=48;BaseQRankSum=7.246;DP=708;FS=0.000;HRun=0;HaplotypeScore=157.4498;InbreedingCoeff=0.5722;MQ=50.41;MQ0=10;MQRankSum=-6.439;QD=3.87;ReadPosRankSum=-1.591;VQSLOD=2.5162;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:0:0,0,0	0/0:10,0:10:27.08:0,27,472	0/0:50,0:21:8.50:0,8,862	0/0:48,0:17:51.16:0,51,905	0/0:17,0:17:44.88:0,45,855	./.	0/1:6,9:15:0.37:0,0,0	0/0:33,0:32:93.23:0,93,1608	0/0:20,0:20:50.80:0,51,884	0/1:14,6:19:11.51:254,0,12	./.	0/0:22,0:22:0:0,0,0	1/1:15,0:14:8.17:63,8,0	0/1:1,3:4:0:1,0,0	0/0:26,0:24:57.16:0,57,1098	0/0:14,0:14:24.04:0,24,443	0/0:33,0:33:96.19:0,96,1627	0/0:30,0:30:41.43:0,41,1275	0/0:16,0:12:36.12:0,36,693	0/0:20,0:20:48.16:0,48,926	0/0:153,0:153:99:0,345,6258	./.	1/1:2,2:4:0.47:2,0,0	./.	0/0:36,0:36:93.32:0,93,1783	0/0:29,1:30:53.60:0,54,1557	0/0:20,0:19:51.17:0,51,964	0/0:20,0:20:60.20:0,60,1107
chr10	94768781	.	TTGTATG	T	3730.02	PASS	AB=0.989;AC=29;AF=0.518;AN=56;BaseQRankSum=-2.615;DP=537;FS=33.347;HRun=0;HaplotypeScore=106.0858;InbreedingCoeff=0.5460;MQ=68.26;MQ0=5;MQRankSum=-2.716;QD=12.07;ReadPosRankSum=1.218;VQSLOD=0.9934;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:31:6.02:121,6,0	0/0:10,0:10:2.18:0,2,647	0/0:26,0:15:39.71:0,40,336	0/0:25,0:14:41.81:0,42,366	0/0:19,0:19:45.43:0,45,576	1/1:0,0:16:6.02:102,6,0	1/1:1,0:22:15.05:255,15,0	1/1:21,0:23:59.89:505,60,0	0/0:17,0:17:23.86:0,24,312	0/1:25,0:25:99:260,0,418	0/1:6,0:12:26.87:27,0,273	1/1:0,18:18:8.64:209,9,0	1/1:7,5:12:29.97:486,30,0	1/1:14,2:17:39.89:507,40,0	0/0:19,0:19:30.03:0,30,563	0/0:19,0:19:32.97:0,33,403	0/0:30,0:29:74.90:0,75,1744	0/0:21,0:21:41.89:0,42,728	0/1:15,0:14:25.57:102,0,26	0/1:17,0:18:85.07:173,0,85	1/1:22,0:22:11.94:265,12,0	1/1:9,0:10:20.97:202,21,0	1/1:0,20:21:2.72:68,3,0	1/1:2,21:24:12.04:261,12,0	0/0:19,0:19:41.99:0,42,485	0/1:13,0:13:1.89:137,0,2	0/0:23,0:23:20.98:0,21,176	1/1:0,0:8:3.01:51,3,0
chr10	94768783	.	GTA	G	3802.58	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=-0.738;DP=535;FS=24.673;HRun=0;HaplotypeScore=79.1208;InbreedingCoeff=0.7378;MQ=68.18;MQ0=6;MQRankSum=-2.241;QD=11.56;ReadPosRankSum=0.919;VQSLOD=1.1628;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:31:5.98:46,6,0	0/0:11,0:11:25.15:0,25,308	0/0:26,0:15:39.71:0,40,336	0/0:25,0:14:41.81:0,42,366	0/0:19,0:19:45.74:0,46,400	1/1:16,0:16:5.98:46,6,0	1/1:21,0:21:14.94:115,15,0	1/1:22,0:22:59.89:505,60,0	0/0:17,0:17:23.86:0,24,208	0/1:26,0:25:33.38:353,0,33	0/1:13,0:13:26.36:48,0,26	1/1:18,0:18:8.97:70,9,0	1/1:12,0:12:29.85:230,30,0	1/1:17,0:17:41.51:314,42,0	0/0:19,0:19:30.03:0,30,305	0/0:18,0:18:32.94:0,33,280	0/0:32,0:31:54.60:0,55,970	0/0:21,0:21:31.71:0,32,358	1/1:12,2:13:32.43:304,32,0	1/1:16,3:19:50.94:474,51,0	1/1:21,0:21:47.65:377,48,0	1/1:9,0:9:20.93:164,21,0	1/1:22,0:21:2.98:22,3,0	1/1:24,0:24:11.95:93,12,0	0/0:18,0:18:4.60:0,5,311	1/1:13,0:13:35.88:299,36,0	1/1:1,21:22:21.07:319,21,0	1/1:8,0:8:2.99:23,3,0
chr10	94768785	.	A	ATGTG	1495.10	PASS	AB=0.899;AC=20;AF=0.400;AN=50;BaseQRankSum=-4.268;DP=578;FS=5.068;HRun=0;HaplotypeScore=115.9942;InbreedingCoeff=0.4168;MQ=65.72;MQ0=7;MQRankSum=3.219;QD=6.03;ReadPosRankSum=-1.701;VQSLOD=1.8654;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:6.01:0,6,56	0/1:10,0:11:6.80:221,0,7	./.	./.	1/1:19,2:21:9.01:142,9,0	0/0:17,0:17:5.33:0,5,35	0/0:23,0:23:13.78:0,14,104	./.	1/1:6,11:18:6.02:141,6,0	1/1:26,0:25:23.99:170,24,0	0/1:14,0:14:21.49:49,0,21	0/0:18,0:18:8.77:0,9,80	0/0:14,0:14:17.11:0,17,154	0/0:18,0:18:12.46:0,12,81	1/1:5,15:24:14.79:294,15,0	1/1:11,9:22:3.01:71,3,0	0/0:33,0:33:21.43:0,21,434	0/1:7,14:25:7.08:344,0,7	0/0:18,0:16:3.19:0,3,24	0/1:23,0:23:23.13:37,0,23	1/1:27,0:27:4.15:18,4,0	0/0:11,0:11:1.14:0,1,3	0/0:22,0:21:1.39:0,1,4	0/0:22,0:22:12.01:0,12,109	1/1:14,6:20:9.02:168,9,0	1/1:17,0:17:0.89:2,1,0	0/0:23,0:23:20.04:0,20,174	0/0:8,0:8:3:0,3,28
chr10	94768981	.	TC	T	7775.53	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=19.331;DP=682;FS=11.470;HRun=7;HaplotypeScore=89.0764;InbreedingCoeff=0.9993;MQ=85.21;MQ0=0;MQRankSum=-2.589;QD=27.09;ReadPosRankSum=2.057;VQSLOD=4.7479;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,59:60:99:1673,165,0	0/0:14,0:14:36.08:0,36,425	0/0:20,0:20:44.30:0,44,556	0/0:23,0:23:55.40:0,55,700	0/0:15,0:15:42.12:0,42,506	1/1:0,17:17:51.12:520,51,0	1/1:2,32:34:99:979,99,0	0/0:33,0:33:81.23:0,81,985	0/0:30,0:30:84.16:0,84,987	1/1:2,21:23:63.12:639,63,0	1/1:2,14:16:39.09:398,39,0	1/1:4,22:26:60.12:612,60,0	1/1:1,21:22:54.08:539,54,0	1/1:2,22:24:63.14:642,63,0	0/0:26,0:26:75.16:0,75,922	0/0:24,0:24:63.18:0,63,763	0/0:21,0:21:54.17:0,54,679	0/0:17,0:17:51.16:0,51,639	0/0:15,0:15:45.12:0,45,540	0/0:20,0:20:54.14:0,54,640	0/0:54,0:54:99:0,159,1947	1/1:0,21:21:57.13:581,57,0	1/1:0,19:19:54.12:550,54,0	1/1:1,24:25:63.14:642,63,0	0/0:26,0:26:75.22:0,75,918	0/0:18,1:19:20.55:0,21,562	0/0:23,0:23:66.21:0,66,829	0/0:14,0:14:36.12:0,36,453
chr10	94769563	.	AGTT	A	4692.17	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.479;DP=714;FS=8.833;HRun=0;HaplotypeScore=99.9759;InbreedingCoeff=0.9993;MQ=76.86;MQ0=1;MQRankSum=-2.877;QD=34.00;ReadPosRankSum=3.610;VQSLOD=5.2297;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.33:0,96,2021	1/1:1,9:10:24.08:360,24,0	0/0:33,0:31:60.19:0,60,1085	0/0:18,0:16:36.12:0,36,659	1/1:3,18:21:51.17:767,51,0	0/0:14,0:14:42.14:0,42,885	0/0:28,0:28:75.24:0,75,1493	0/0:48,0:48:99:0,117,2255	1/1:3,25:28:63.21:948,63,0	0/0:26,0:26:69.24:0,69,1446	0/0:30,0:30:78.26:0,78,1603	0/0:13,0:13:36.11:0,36,720	0/0:22,0:22:63.19:0,63,1248	0/0:32,0:32:87.28:0,87,1775	1/1:4,22:26:60.20:902,60,0	1/1:2,15:17:39.13:587,39,0	0/0:33,0:33:90.30:0,90,1857	1/1:6,12:18:30.10:451,30,0	0/0:34,0:33:81.25:0,81,1619	0/0:19,0:19:48.13:0,48,886	0/0:34,0:34:93.28:0,93,1844	0/0:31,0:31:78.26:0,78,1606	0/0:18,0:18:42.12:0,42,795	0/0:38,0:38:99:0,105,2211	1/1:0,18:18:45.15:677,45,0	0/0:31,0:31:78.23:0,78,1499	0/0:27,0:27:72.22:0,72,1432	0/0:11,0:11:27.04:0,27,452
chr10	94770849	.	A	AAAAC	11999.70	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-5.857;DP=709;FS=21.728;HRun=0;HaplotypeScore=130.2625;InbreedingCoeff=0.9456;MQ=61.23;MQ0=7;MQRankSum=-4.472;QD=30.61;ReadPosRankSum=-2.270;VQSLOD=2.6361;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:49:84.71:0,85,1372	1/1:8,0:10:9.03:156,9,0	0/0:28,0:21:24.08:0,24,324	0/0:20,0:17:18.06:0,18,238	1/1:5,0:13:12.71:228,13,0	0/0:28,0:28:54.18:0,54,841	0/0:29,0:29:42.27:0,42,692	1/1:30,0:27:30.55:523,31,0	1/1:8,1:24:39.13:680,39,0	1/1:12,13:27:0.10:919,0,0	1/1:10,15:27:42.14:945,42,0	0/0:32,0:32:60.20:0,60,949	0/0:18,0:18:48.16:0,48,757	0/0:17,0:17:33.11:0,33,509	1/1:16,0:32:33.11:580,33,0	1/1:7,0:20:42.14:727,42,0	0/0:29,0:29:45.10:0,45,650	1/1:9,1:17:21.07:392,21,0	1/1:14,9:22:31.35:631,31,0	1/1:11,20:33:42.14:1008,42,0	1/1:11,18:29:42.14:1009,42,0	0/0:22,0:22:30.10:0,30,433	0/0:27,0:27:42.08:0,42,583	0/0:18,0:18:24.07:0,24,361	1/1:6,0:10:12.04:209,12,0	1/1:5,31:38:96.31:2080,96,0	1/1:8,22:30:51.13:1190,51,0	1/1:8,15:24:30.10:720,30,0
chr10	94771148	.	T	TCTAC	2003.22	PASS	AB=0.947;AC=5;AF=0.089;AN=56;BaseQRankSum=4.616;DP=707;FS=20.484;HRun=0;HaplotypeScore=125.0222;InbreedingCoeff=0.7602;MQ=87.03;MQ0=0;MQRankSum=-3.449;QD=26.36;ReadPosRankSum=-0.568;VQSLOD=1.4657;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:99:0,108,1916	0/0:5,0:5:9.03:0,9,146	0/0:23,0:23:63.16:0,63,1069	0/0:28,0:28:62.55:0,63,1015	0/0:22,0:22:60.19:0,60,1065	0/0:23,0:23:66.20:0,66,1182	0/0:27,0:27:78.27:0,78,1435	0/0:32,0:32:90.27:0,90,1544	0/0:28,0:28:84.27:0,84,1481	1/1:3,16:22:60.15:1393,60,0	1/1:3,11:18:26.91:683,27,0	0/0:21,0:21:63.22:0,63,1159	0/0:18,0:18:51.14:0,51,904	0/0:16,0:16:45.15:0,45,828	0/0:38,0:38:99:0,108,1926	0/0:28,0:28:66.21:0,66,1170	0/0:31,0:31:84.23:0,84,1436	0/0:40,0:40:99:0,111,1925	0/0:22,0:22:63.19:0,63,1067	0/0:19,0:19:39.13:0,39,708	0/0:32,0:32:84.29:0,84,1525	0/0:17,0:17:48.15:0,48,850	0/0:20,0:20:39.13:0,39,690	0/0:40,0:40:99:0,108,1904	0/0:24,0:23:54.18:0,54,992	0/1:34,2:36:56.22:56,0,1599	0/0:23,0:23:63.19:0,63,1118	0/0:15,0:15:39.13:0,39,699
chr10	94771462	.	GTGTGTGTC	G	1257.24	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=0.599;DP=659;FS=14.023;HRun=0;HaplotypeScore=202.9724;InbreedingCoeff=0.3398;MQ=41.09;MQ0=25;MQRankSum=-2.612;QD=3.95;ReadPosRankSum=-6.737;VQSLOD=-0.6564;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:47,0:45:3.16:26,3,0	0/0:16,0:14:17.91:0,18,313	1/1:8,0:2:2.98:21,3,0	0/0:25,0:7:4.84:0,5,44	0/1:17,0:16:25.35:25,0,353	1/1:19,1:20:12.19:101,12,0	1/1:32,1:32:30.04:260,30,0	0/0:32,0:30:31.82:0,32,266	0/0:21,0:18:11.68:0,12,255	0/1:16,0:16:75.49:109,0,75	0/0:9,0:8:9.01:0,9,91	0/1:29,0:28:3.12:177,0,3	1/1:16,1:16:22.60:235,23,0	1/1:20,1:21:14.07:167,14,0	0/0:31,0:31:33.15:0,33,636	0/0:23,0:19:33.58:0,34,793	0/0:26,0:26:62.77:0,63,1524	0/0:30,0:28:17.23:0,17,967	0/0:20,0:16:0.61:0,1,88	0/0:21,0:21:2.31:0,2,82	0/0:62,0:57:6.47:0,6,108	1/1:17,0:17:17.76:145,18,0	0/0:14,0:13:2.56:0,3,23	1/1:32,0:31:1.55:66,2,0	0/1:16,0:15:12.98:13,0,127	0/1:28,0:27:79.22:79,0,344	0/1:16,0:16:9.60:10,0,31	0/0:9,0:9:1.15:0,1,165
chr10	94771468	.	GTC	G	2081.24	PASS	AB=0.973;AC=34;AF=0.607;AN=56;BaseQRankSum=1.657;DP=649;FS=1.530;HRun=0;HaplotypeScore=166.2469;InbreedingCoeff=-0.0759;MQ=37.60;MQ0=27;MQRankSum=-1.637;QD=3.80;ReadPosRankSum=-3.375;VQSLOD=2.1512;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:46,0:43:1.12:24,1,0	0/1:16,0:14:7.66:8,0,32	0/1:16,0:4:12.12:12,0,27	0/1:30,0:10:6.15:6,0,81	0/1:15,2:16:25.58:26,0,26	1/1:18,0:18:17.21:131,17,0	1/1:29,0:28:32.65:227,33,0	0/0:30,0:28:30.16:0,30,234	0/1:20,0:17:7.65:35,0,8	1/1:14,0:14:25.27:252,25,0	1/1:5,4:8:9.01:116,9,0	1/1:25,2:26:17.08:217,17,0	1/1:19,0:18:29.88:186,30,0	0/1:20,1:22:4.77:84,0,5	0/1:27,2:29:20.98:106,0,21	0/0:24,0:20:22.87:0,23,65	0/0:28,0:28:64.52:0,65,843	0/1:26,3:27:86.31:182,0,86	0/1:19,0:15:55.03:79,0,55	0/0:19,0:19:2.53:0,3,34	0/1:58,0:53:16.61:17,0,30	1/1:18,0:18:13.94:127,14,0	1/1:15,0:14:2.99:24,3,0	0/1:32,0:31:31.27:70,0,31	1/1:12,2:13:12.38:107,12,0	0/1:27,0:26:93.84:170,0,94	0/1:15,0:15:16.30:25,0,16	0/1:8,0:8:22.22:22,0,51
chr10	94771474	.	G	GTCTC	1535.76	PASS	AB=0.929;AC=12;AF=0.214;AN=56;BaseQRankSum=-0.907;DP=706;FS=4.814;HRun=0;HaplotypeScore=212.1504;InbreedingCoeff=0.3377;MQ=35.72;MQ0=36;MQRankSum=-5.549;QD=6.83;ReadPosRankSum=-1.937;VQSLOD=2.2639;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,6:43:3.13:0,3,28	0/0:13,0:11:16.55:0,17,243	0/0:30,0:5:12.04:0,12,204	0/0:50,0:13:32.74:0,33,508	0/0:15,0:14:23.67:0,24,336	0/0:17,0:17:3.86:0,4,36	0/0:36,0:36:11.64:0,12,69	1/1:33,0:30:36.03:507,36,0	0/0:20,0:17:8.05:0,8,112	0/0:14,0:14:0.16:0,0,37	0/0:10,0:9:5.52:0,6,66	0/1:27,0:28:0.33:0,0,123	0/0:22,0:21:10.03:0,10,154	0/0:20,0:20:10.13:0,10,62	0/0:28,0:29:34.80:0,35,461	0/0:23,0:19:27.41:0,27,403	0/0:28,0:28:75.23:0,75,1399	0/0:29,0:26:57.83:0,58,730	0/1:22,0:19:15.81:287,0,16	1/1:20,4:24:2.71:28,3,0	1/1:56,5:59:5.38:100,5,0	0/0:18,0:19:3.67:0,4,43	0/0:14,0:13:0.37:0,0,1	0/0:32,0:31:4.21:0,4,26	0/0:12,0:11:4.44:0,4,51	0/1:26,3:29:99:409,0,147	0/1:12,1:15:14.99:39,0,15	1/1:4,2:8:8.97:312,9,0
chr10	94771476	.	GTC	G	1412.40	PASS	AB=0.931;AC=18;AF=0.321;AN=56;BaseQRankSum=2.759;DP=720;FS=7.329;HRun=0;HaplotypeScore=185.9718;InbreedingCoeff=-0.1121;MQ=35.64;MQ0=38;MQRankSum=-4.982;QD=3.43;ReadPosRankSum=-4.703;VQSLOD=0.8283;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:39,7:44:4.77:33,5,0	0/0:12,1:11:18.50:0,18,260	0/0:35,2:5:6.71:0,7,116	0/0:55,1:13:31.47:0,31,453	0/0:15,0:14:27.05:0,27,382	0/1:16,0:16:1.61:2,0,57	0/1:37,0:36:52.23:52,0,116	0/1:25,7:29:99:311,0,115	0/1:18,1:17:3.39:3,0,124	0/0:14,0:14:35.66:0,36,266	0/0:10,0:9:5.69:0,6,32	0/1:28,1:28:45.43:45,0,121	0/1:22,0:21:4.99:5,0,87	0/1:21,0:21:14.23:31,0,14	0/0:24,4:28:27.61:0,28,417	0/0:19,4:19:35.87:0,36,567	0/0:27,0:27:72.06:0,72,1245	0/0:28,0:25:33.76:0,34,681	0/1:18,4:19:47.35:274,0,47	1/1:18,8:25:1.62:59,2,0	1/1:57,8:59:0.67:75,1,0	0/1:21,0:21:27.72:28,0,104	0/0:13,0:12:2.62:0,3,25	0/0:32,0:31:5.02:0,5,48	0/0:10,2:11:11.12:0,11,115	0/1:23,8:30:26.84:427,0,27	0/1:11,4:15:24.42:78,0,24	0/1:9,0:9:29.91:138,0,30
chr10	94771478	.	C	CTG	489.94	PASS	AB=0.990;AC=17;AF=0.304;AN=56;BaseQRankSum=4.162;DP=745;FS=0.000;HRun=0;HaplotypeScore=204.2417;InbreedingCoeff=0.5715;MQ=35.56;MQ0=38;MQRankSum=-4.779;QD=1.60;ReadPosRankSum=-4.987;VQSLOD=0.3657;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:44,1:44:1.23:8,1,0	0/0:12,0:10:14.98:0,15,158	0/0:43,1:8:11.94:0,12,118	0/0:59,0:13:23.01:0,23,355	0/0:15,0:14:21.06:0,21,260	0/0:17,0:17:5.56:0,6,95	0/0:37,0:36:17.70:0,18,195	1/1:33,1:31:16.45:111,16,0	0/0:19,0:17:10.26:0,10,126	0/0:14,0:14:35.95:0,36,343	0/0:10,0:9:9.03:0,9,108	0/1:29,0:28:10.68:11,0,250	0/0:22,0:21:13:0,13,189	0/1:22,0:22:8.04:8,0,41	0/0:29,0:29:37.55:0,38,420	0/0:23,0:19:32.26:0,32,374	0/0:26,0:26:68.74:0,69,803	0/0:29,0:26:40.81:0,41,558	1/1:24,0:21:14.52:89,15,0	1/1:25,1:25:6.41:60,6,0	1/1:69,1:64:7.72:89,8,0	0/0:22,0:22:14.45:0,14,159	0/0:13,0:12:2.53:0,3,32	0/0:32,0:31:7.26:0,7,68	0/0:12,0:11:11.75:0,12,133	0/1:30,1:30:27.80:111,0,28	1/1:14,1:15:4.89:53,5,0	1/1:8,1:9:15.58:127,16,0
chr10	94771500	.	GCGCACA	G	733.63	PASS	AB=0.897;AC=10;AF=0.179;AN=56;BaseQRankSum=1.984;DP=794;FS=10.151;HRun=0;HaplotypeScore=231.8014;InbreedingCoeff=-0.2373;MQ=36.49;MQ0=46;MQRankSum=-2.924;QD=3.74;ReadPosRankSum=-0.131;VQSLOD=1.2091;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,1:40:16.60:0,17,393	0/0:7,6:11:9.50:0,10,310	0/0:79,0:13:34.93:0,35,949	0/0:92,0:19:48.40:0,48,1244	0/1:11,2:13:40.09:40,0,527	0/0:14,2:16:17.68:0,18,380	0/1:36,0:36:25.50:26,0,636	0/0:33,0:29:75.26:0,75,2172	0/1:7,8:14:39.47:39,0,312	0/0:14,0:14:38.54:0,39,897	0/0:7,0:7:5.36:0,5,186	0/0:30,0:29:5.56:0,6,947	0/1:21,0:20:70.51:71,0,364	0/1:22,1:23:54.09:54,0,145	0/1:24,6:30:99:230,0,703	0/0:14,10:20:23.23:0,23,775	0/0:27,0:27:60.89:0,61,2516	0/1:20,0:18:99:236,0,783	0/0:23,0:22:60.13:0,60,1452	0/0:23,0:22:11.29:0,11,353	0/0:78,2:77:64.02:0,64,1814	0/0:22,2:24:22.32:0,22,561	0/0:14,1:15:2.66:0,3,103	0/0:29,0:28:5.77:0,6,207	0/1:10,6:15:99:129,0,415	0/0:27,0:27:43.27:0,43,2016	0/1:13,1:14:45.98:46,0,650	0/1:8,0:8:0.33:0,0,461
chr10	94771506	.	A	ATGTGTGTGTG	2028.75	PASS	AB=0.881;AC=25;AF=0.446;AN=56;BaseQRankSum=-2.350;DP=826;FS=20.630;HRun=0;HaplotypeScore=253.7213;InbreedingCoeff=0.6051;MQ=38.84;MQ0=42;MQRankSum=-4.325;QD=6.22;ReadPosRankSum=-0.873;VQSLOD=0.5149;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:15.75:0,16,333	0/0:14,0:12:0.94:0,1,1	0/0:81,0:12:9.03:0,9,164	0/0:95,0:20:10.38:0,10,168	1/1:12,0:12:3.48:65,3,0	0/0:8,8:22:0.26:0,0,1	1/1:25,0:48:3.81:92,4,0	0/0:31,0:27:20.97:0,21,276	1/1:15,0:14:6.01:62,6,0	0/0:7,0:14:11.97:0,12,227	1/1:3,0:7:0.81:2,1,0	1/1:21,9:30:6.15:240,6,0	1/1:10,11:20:18.53:900,19,0	1/1:10,13:26:4.08:95,4,0	0/1:30,0:30:41.96:281,0,42	0/1:22,0:18:0:1,0,0	0/0:23,0:23:48.59:0,49,1249	1/1:19,0:19:13.29:293,13,0	0/0:23,0:22:32.88:0,33,455	0/0:22,0:21:11.19:0,11,276	0/0:86,0:83:59.07:0,59,1423	1/1:17,5:28:2.30:73,2,0	1/1:6,5:15:0.15:0,0,0	0/1:15,11:33:0:0,0,0	1/1:17,0:16:9.22:91,9,0	0/0:26,0:26:42.14:0,42,903	0/0:15,0:15:17.55:0,18,370	0/0:7,0:7:6.02:0,6,139
chr10	94771531	.	TGA	T	3755.44	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=5.466;DP=682;FS=3.411;HRun=0;HaplotypeScore=162.5272;InbreedingCoeff=0.9031;MQ=51.18;MQ0=10;MQRankSum=-1.005;QD=16.99;ReadPosRankSum=4.975;VQSLOD=3.7904;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:28:17.11:270,17,0	0/0:10,0:9:2.51:0,3,7	0/0:31,0:10:17.63:0,18,234	0/0:37,0:13:7.76:0,8,190	0/0:14,0:14:17.86:0,18,155	0/0:21,0:21:14.64:0,15,130	0/0:48,0:48:32.28:0,32,354	1/1:1,22:21:59.76:534,60,0	0/0:19,0:18:14.99:0,15,133	0/0:17,0:16:31.38:0,31,215	0/0:7,0:7:2.72:0,3,25	0/0:28,0:27:32.75:0,33,314	0/0:18,0:17:29.42:0,29,304	0/0:24,0:24:12.80:0,13,105	0/0:29,0:29:32.40:0,32,320	0/0:22,0:18:20.52:0,21,167	0/0:28,0:28:81.01:0,81,1113	0/0:19,0:19:38.92:0,39,368	1/1:1,17:18:50.89:550,51,0	1/1:3,16:19:14.85:202,15,0	1/1:4,83:86:63.76:976,64,0	0/0:25,0:25:17.41:0,17,127	0/0:15,0:15:11.52:0,12,90	0/0:30,0:29:17.79:0,18,149	0/0:18,0:17:16.63:0,17,151	1/1:1,20:20:59.95:758,60,0	1/1:2,14:16:17.99:265,18,0	1/1:6,2:8:23.39:200,23,0
chr10	94772148	.	TA	T	4295.56	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.069;DP=569;FS=8.449;HRun=8;HaplotypeScore=59.8948;InbreedingCoeff=0.9876;MQ=73.85;MQ0=0;MQRankSum=0.055;QD=22.85;ReadPosRankSum=2.363;VQSLOD=5.3759;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.27:0,96,1143	0/0:7,0:7:18.04:0,18,196	0/0:20,0:17:39.43:0,39,399	0/0:17,0:13:7.87:0,8,143	0/0:35,0:35:99:0,102,1232	1/1:2,19:21:51.08:492,51,0	1/1:2,19:21:51.06:492,51,0	0/0:23,0:23:63.11:0,63,697	0/0:14,0:14:33.10:0,33,398	1/1:6,19:25:57.02:534,57,0	1/1:4,23:27:65.97:615,66,0	1/1:1,13:14:36.06:348,36,0	1/1:1,11:12:30.05:290,30,0	1/1:1,16:17:45.07:434,45,0	0/0:21,0:21:54.15:0,54,641	0/0:25,0:25:54.15:0,54,633	0/0:16,0:16:39.11:0,39,459	0/0:22,0:22:63.17:0,63,747	0/0:25,0:25:66.19:0,66,780	0/0:25,0:25:72.22:0,72,870	0/0:12,0:12:33.10:0,33,399	1/1:2,13:15:30.04:290,30,0	1/1:0,21:21:48.03:453,48,0	1/1:1,14:15:36.06:348,36,0	0/0:22,0:22:63.17:0,63,740	0/0:27,2:29:43.25:0,43,804	0/0:20,0:20:60.18:0,60,725	0/0:15,0:15:45.09:0,45,517
chr10	94773343	.	GCACACACACACA	G	853.57	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=1.816;DP=622;FS=5.566;HRun=0;HaplotypeScore=254.9800;InbreedingCoeff=0.5670;MQ=63.46;MQ0=1;MQRankSum=0.971;QD=16.74;ReadPosRankSum=0.498;VQSLOD=1.9888;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:35:30.10:0,30,1254	0/0:9,0:10:9.03:0,9,327	1/1:31,0:21:2.03:6,2,0	0/0:19,0:14:15.05:0,15,253	0/0:13,0:14:2.04:0,2,6	0/0:27,0:27:16.47:0,16,421	0/0:38,0:38:9.11:0,9,133	0/0:26,0:26:51.17:0,51,1587	0/0:22,0:22:30.83:0,31,736	1/1:4,14:20:45:946,45,0	./.	0/0:32,0:32:19.13:0,19,427	0/0:26,0:26:22.85:0,23,650	0/0:30,0:30:16.68:0,17,245	0/0:24,0:25:23.86:0,24,630	0/0:21,0:21:30.09:0,30,1156	0/0:31,0:38:78.25:0,78,3333	0/0:20,0:20:24.08:0,24,1046	0/0:19,0:17:18.06:0,18,601	0/0:8,0:8:6:0,6,98	0/0:29,0:29:6.02:0,6,137	0/0:17,0:17:3.07:0,3,74	0/0:5,0:5:0:0,0,0	0/0:36,0:35:16.34:0,16,281	0/0:14,0:15:3.01:0,3,74	0/0:25,0:25:51.14:0,51,1472	0/0:9,0:8:15.04:0,15,350	0/0:10,0:10:21.05:0,21,647
chr10	94773363	.	A	ACG	907.57	PASS	AB=0.970;AC=20;AF=0.357;AN=56;BaseQRankSum=8.136;DP=685;FS=0.518;HRun=0;HaplotypeScore=194.0715;InbreedingCoeff=0.3261;MQ=45.32;MQ0=8;MQRankSum=-3.154;QD=2.63;ReadPosRankSum=4.598;VQSLOD=2.3545;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:40:14.96:15,0,215	1/1:5,0:5:4.58:15,5,0	0/0:21,0:9:23.98:0,24,212	0/0:20,0:7:17.94:0,18,168	0/0:14,0:14:3:0,3,25	0/1:22,1:23:18.76:76,0,19	1/1:45,0:45:14.41:116,14,0	0/0:31,0:31:83.29:0,83,640	0/0:31,0:31:20.69:0,21,170	0/0:27,0:27:9.56:0,10,335	0/0:11,0:11:3:0,3,25	1/1:30,4:35:20.42:205,20,0	1/1:22,4:26:27.03:199,27,0	1/1:30,3:33:2.89:147,3,0	0/1:27,0:26:4.42:4,0,66	0/1:24,0:24:4.96:5,0,82	0/0:52,0:49:99:0,129,1305	0/1:20,0:20:18.11:18,0,113	0/0:16,0:14:33.41:0,33,232	0/0:15,0:15:5.99:0,6,48	0/0:39,0:39:11.56:0,12,80	0/1:12,1:13:17.76:18,0,33	0/1:6,1:6:0:0,0,0	1/1:35,3:37:26.81:259,27,0	0/0:17,0:17:3:0,3,25	0/0:30,0:29:76.56:0,77,587	0/0:16,0:15:6.10:0,6,65	0/1:9,0:9:3.46:3,0,52
chr10	94773365	.	A	ACGCACGCACGCACGCG	3944.04	PASS	AB=0.958;AC=17;AF=0.315;AN=54;BaseQRankSum=0.143;DP=705;FS=5.280;HRun=0;HaplotypeScore=292.5651;InbreedingCoeff=0.5719;MQ=45.79;MQ0=8;MQRankSum=-2.045;QD=13.37;ReadPosRankSum=0.510;VQSLOD=1.9937;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:54.17:0,54,1343	0/0:5,0:5:8.79:0,9,154	0/0:20,0:8:11.22:0,11,509	0/0:20,0:7:21.06:0,21,364	./.	1/1:21,1:23:1.38:440,1,0	1/1:29,15:60:19.24:247,19,0	0/0:30,0:30:84.25:0,84,1714	0/0:32,0:32:25.41:0,25,390	0/1:25,0:25:25.80:26,0,687	0/0:11,0:11:3.01:0,3,75	1/1:21,16:45:18.67:806,19,0	1/1:23,3:27:26.84:930,27,0	0/1:30,3:33:0.38:420,0,0	0/0:26,0:25:27.50:0,27,348	0/0:26,0:26:29.73:0,30,614	0/0:51,0:48:99:0,127,4184	0/0:18,0:18:33.11:0,33,781	0/0:14,0:13:36.12:0,36,700	0/0:16,0:16:5.98:0,6,94	0/0:39,0:39:10.85:0,11,166	1/1:11,1:12:9.21:143,9,0	0/1:6,1:6:0:0,0,0	1/1:34,3:36:25.40:719,25,0	0/0:17,0:17:3.01:0,3,75	0/0:31,0:30:77.99:0,78,1734	0/1:17,0:16:0.31:0,0,205	0/1:9,0:9:99:214,0,135
chr10	94773378	.	C	CACACACACAT	4376.70	PASS	AB=0.867;AC=29;AF=0.537;AN=54;BaseQRankSum=6.769;DP=738;FS=6.496;HRun=0;HaplotypeScore=242.4524;InbreedingCoeff=0.1605;MQ=53.06;MQ0=7;MQRankSum=-7.282;QD=8.68;ReadPosRankSum=2.004;VQSLOD=2.8413;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:67.13:0,67,568	1/1:1,0:6:8.47:109,8,0	0/0:24,0:17:47.63:0,48,410	0/1:22,0:10:34.81:35,0,109	0/0:2,0:17:0:0,0,0	0/1:25,0:25:98.39:98,0,125	0/0:52,0:52:2.24:0,2,136	1/1:31,0:31:56.63:803,57,0	1/1:0,0:23:6.44:81,6,0	0/1:34,0:34:61.97:62,0,512	0/0:12,0:12:5.96:0,6,44	0/1:46,0:46:99:228,0,121	0/1:27,0:27:99:206,0,166	0/1:31,0:31:53.39:53,0,120	1/1:1,0:24:12.51:228,13,0	0/1:0,0:22:9.34:168,0,9	0/0:52,0:49:91.54:0,92,2163	0/1:1,0:23:17.23:157,0,17	1/1:18,0:17:47.46:447,47,0	0/1:2,14:17:0:0,0,0	1/1:3,0:51:5.65:32,6,0	0/0:17,0:17:24.08:0,24,181	0/1:6,0:5:0:0,0,0	0/1:35,0:34:99:134,0,159	./.	1/1:31,0:30:66.36:796,66,0	1/1:1,14:18:8.57:191,9,0	1/1:2,0:12:15.05:549,15,0
chr10	94774339	.	A	AGT	92.81	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=7.298;DP=1124;FS=5.395;HRun=0;HaplotypeScore=267.2347;InbreedingCoeff=0.4426;MQ=50.86;MQ0=50;MQRankSum=-3.947;QD=1.72;ReadPosRankSum=-3.014;VQSLOD=1.7005;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,1:45:99:0,110,1408	0/0:14,0:14:31.30:0,31,373	0/0:86,0:16:20.24:0,20,227	0/0:92,0:14:8.07:0,8,184	0/0:35,0:35:83.92:0,84,1029	0/0:31,0:31:71.61:0,72,852	0/0:45,0:45:20.18:0,20,1004	0/0:42,0:39:78.24:0,78,987	0/0:40,0:39:96.01:0,96,1212	0/1:40,0:38:70.75:166,0,71	1/1:14,0:13:3.24:12,3,0	0/0:36,0:35:71.95:0,72,904	0/0:27,0:25:57.10:0,57,689	0/0:39,0:38:80.99:0,81,994	0/0:39,0:38:77.83:0,78,982	0/0:39,0:38:80.77:0,81,1036	0/0:49,0:47:99:0,129,1667	0/0:25,0:24:35.88:0,36,727	0/0:34,0:26:59.89:0,60,716	0/0:19,0:19:45.45:0,45,568	0/0:133,2:129:99:0,276,3515	0/0:39,0:39:71.75:0,72,884	0/0:20,0:20:32.76:0,33,425	0/0:49,2:51:38.66:0,39,469	0/0:15,0:14:30.01:0,30,390	0/0:33,0:33:71.94:0,72,1046	0/0:22,0:22:60.14:0,60,743	0/0:16,0:16:44.94:0,45,529
chr10	94774348	.	G	GGT	1695.35	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.433;DP=1135;FS=20.005;HRun=0;HaplotypeScore=293.1526;InbreedingCoeff=0.9948;MQ=51.14;MQ0=41;MQRankSum=-3.378;QD=30.82;ReadPosRankSum=-1.375;VQSLOD=1.5633;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:43:99:0,102,1286	0/0:14,0:14:30.10:0,30,394	0/0:94,0:20:42.06:0,42,500	0/0:90,0:17:33.23:0,33,368	0/0:34,0:34:72.15:0,72,903	0/0:30,0:30:62.83:0,63,697	0/0:44,0:46:53:0,53,844	0/0:42,0:39:96.05:0,96,1232	0/0:40,0:39:99:0,105,1296	1/1:12,28:39:96.32:1545,96,0	1/1:5,10:14:18.04:270,18,0	0/0:33,0:32:53.90:0,54,690	0/0:26,0:24:48.12:0,48,607	0/0:36,0:35:65.97:0,66,790	0/0:39,0:38:68.98:0,69,884	0/0:40,0:39:87.09:0,87,1067	0/0:51,0:51:99:0,141,1845	0/0:24,0:23:51.84:0,52,688	0/0:35,0:30:75.22:0,75,950	0/0:19,0:19:39.43:0,39,499	0/0:143,0:137:99:0,301,3877	0/0:44,0:44:53.40:0,53,650	0/0:18,0:18:32.76:0,33,433	0/0:51,0:51:29.88:0,30,334	0/0:14,0:13:35.95:0,36,431	0/0:34,1:35:38.21:0,38,1072	0/0:22,0:22:63.19:0,63,810	0/0:16,0:16:45.15:0,45,591
chr10	94774360	.	ATG	A	3804.89	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=2.979;DP=1100;FS=0.799;HRun=0;HaplotypeScore=303.8000;InbreedingCoeff=0.9661;MQ=51.50;MQ0=24;MQRankSum=0.099;QD=15.40;ReadPosRankSum=-1.592;VQSLOD=2.7829;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:47:92.27:0,92,1454	0/0:15,0:15:27.08:0,27,406	0/0:85,0:24:44.43:0,44,590	0/0:87,0:18:26.42:0,26,319	0/0:32,0:32:50.68:0,51,869	1/1:6,19:25:41.95:517,42,0	1/1:23,21:44:50.57:628,51,0	0/0:51,0:51:99:0,123,2026	0/0:42,0:41:96.30:0,96,1573	0/0:45,0:44:99:0,108,1779	0/0:16,0:16:14.81:0,15,257	1/1:8,19:26:42.06:498,42,0	1/1:7,14:21:42.11:522,42,0	1/1:4,24:27:54.06:690,54,0	0/0:35,0:34:62.62:0,63,1040	0/0:33,0:33:75.26:0,75,1275	0/0:55,0:55:99:0,144,2459	0/0:26,0:25:54.43:0,54,1010	0/0:32,0:28:75.25:0,75,1231	0/0:19,0:19:41.26:0,41,666	0/0:146,0:142:99:0,304,4947	1/1:10,29:39:44.97:568,45,0	1/1:6,12:18:27.08:343,27,0	1/1:13,32:45:2.82:39,3,0	0/0:12,0:11:27.09:0,27,447	0/0:31,0:31:87.30:0,87,1488	0/0:25,0:25:60.15:0,60,998	0/0:17,0:17:45.15:0,45,763
chr10	94774387	.	A	AGT	19425.76	PASS	AB=0.986;AC=51;AF=0.911;AN=56;BaseQRankSum=2.820;DP=1081;FS=13.488;HRun=0;HaplotypeScore=330.2044;InbreedingCoeff=0.6605;MQ=42.74;MQ0=29;MQRankSum=-0.828;QD=20.32;ReadPosRankSum=-0.990;VQSLOD=3.7532;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:35,10:46:99:1604,99,0	1/1:7,4:11:4.28:99,4,0	0/1:69,0:11:14.81:15,0,35	0/0:69,0:15:29.26:0,29,287	1/1:24,7:31:27.08:451,27,0	1/1:15,5:20:21.52:257,22,0	1/1:25,18:40:49.93:661,50,0	1/1:42,17:56:90.11:1629,90,0	1/1:28,8:35:66:978,66,0	1/1:45,0:43:99:1064,109,0	1/1:18,0:17:8.96:90,9,0	1/1:20,15:34:48.14:655,48,0	1/1:14,10:22:44.74:659,45,0	1/1:21,14:34:29.68:483,30,0	1/1:34,7:41:39.11:611,39,0	1/1:26,6:32:60.20:950,60,0	0/0:56,0:56:99:0,132,1660	1/1:21,7:26:46.03:687,46,0	1/1:10,21:26:68.18:967,68,0	1/1:7,17:24:32.84:515,33,0	1/1:66,65:125:99:3257,199,0	1/1:27,14:41:34.75:482,35,0	1/1:9,3:12:2.96:50,3,0	1/1:29,15:43:12.02:204,12,0	1/1:19,1:19:18.53:272,19,0	1/1:12,20:30:72.25:1190,72,0	1/1:18,14:32:78.19:1176,78,0	1/1:13,2:15:27.08:419,27,0
chr10	94774395	.	TG	T	2775.60	PASS	AB=0.821;AC=23;AF=0.411;AN=56;BaseQRankSum=7.288;DP=1088;FS=1.022;HRun=2;HaplotypeScore=380.5913;InbreedingCoeff=-0.4441;MQ=41.95;MQ0=31;MQRankSum=-0.637;QD=3.38;ReadPosRankSum=1.664;VQSLOD=-0.5388;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,1:49:6.63:0,7,440	0/0:5,4:9:7.57:0,8,38	0/1:63,1:9:6.18:6,0,138	0/0:67,0:15:35.91:0,36,443	0/0:22,9:31:10.72:0,11,98	0/1:13,7:20:90.35:95,0,90	0/1:32,9:38:95.51:96,0,124	0/1:44,11:52:99:260,0,253	0/1:21,17:38:90.70:195,0,91	1/1:16,33:47:58.92:761,59,0	1/1:5,14:16:8.97:79,9,0	0/1:26,9:34:84.31:84,0,179	0/1:21,7:26:98.47:98,0,164	0/1:28,7:32:23.08:23,0,168	0/1:17,25:42:44.87:45,0,90	0/1:16,16:32:66.37:66,0,121	0/0:55,1:56:99:0,150,2139	0/1:20,6:24:83.46:175,0,83	0/1:32,1:26:77.55:78,0,276	0/1:27,0:27:7.19:90,0,7	0/1:128,6:125:99:257,0,351	0/1:32,11:42:65.44:120,0,65	0/0:7,9:16:1.97:0,2,38	0/0:29,10:37:5.14:0,5,41	0/1:12,11:22:29.74:39,0,30	0/1:35,1:32:82.32:82,0,306	0/1:27,2:30:98.88:214,0,99	0/1:6,5:11:38.61:73,0,39
chr10	94774403	.	GTA	G	3625.34	PASS	AB=0.881;AC=26;AF=0.464;AN=56;BaseQRankSum=6.207;DP=1085;FS=4.333;HRun=0;HaplotypeScore=389.7079;InbreedingCoeff=-0.3671;MQ=41.27;MQ0=28;MQRankSum=-1.554;QD=4.09;ReadPosRankSum=1.854;VQSLOD=1.0236;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:48,0:48:99:245,0,100	0/1:7,4:11:22.30:22,0,22	0/0:59,0:7:7.66:0,8,113	0/1:63,0:11:9.18:9,0,102	0/1:22,9:31:18.45:18,0,55	0/1:22,0:22:38.10:38,0,40	0/1:41,0:38:12:12,0,127	0/1:42,7:46:57.56:58,0,108	0/1:24,16:40:35.74:186,0,36	1/1:44,8:49:99:792,119,0	1/1:21,1:19:11.36:83,11,0	0/1:41,0:40:30.31:30,0,126	0/1:31,0:28:64.06:64,0,105	0/0:36,0:33:37.29:0,37,190	0/1:20,24:44:61.29:127,0,61	0/1:15,16:31:52.06:166,0,52	0/0:49,0:49:99:0,128,2132	0/1:24,4:26:33.26:33,0,90	0/1:30,0:24:99:177,0,150	1/1:30,0:30:15.90:270,16,0	0/1:126,1:118:99:568,0,307	0/0:38,0:37:18.85:0,19,70	0/0:16,0:16:9.07:0,9,34	0/1:46,0:43:2.97:3,0,50	0/1:14,9:22:15.99:40,0,16	0/1:37,0:34:99:234,0,144	0/1:28,1:29:1.98:397,0,2	0/1:4,5:10:2.85:52,0,3
chr10	94774405	.	ATGTG	A	5670.58	PASS	AB=0.772;AC=25;AF=0.446;AN=56;BaseQRankSum=-1.090;DP=1093;FS=8.603;HRun=0;HaplotypeScore=408.8028;InbreedingCoeff=0.6153;MQ=42.24;MQ0=27;MQRankSum=-3.485;QD=10.00;ReadPosRankSum=-0.102;VQSLOD=2.5795;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:48:86.15:0,86,458	1/1:8,0:11:5.88:36,6,0	0/0:56,0:8:14.75:0,15,269	0/0:62,0:10:15.05:0,15,282	0/1:24,0:33:5.62:6,0,18	0/0:22,0:22:20.75:0,21,281	0/0:42,0:39:12.51:0,13,559	0/1:30,0:46:5.26:418,0,5	1/1:27,0:40:38.80:364,39,0	0/0:53,0:50:87.56:0,88,824	0/0:23,0:21:10.87:0,11,122	0/1:43,0:42:23.13:23,0,870	0/0:31,0:28:56.37:0,56,895	0/0:36,0:33:36.70:0,37,771	1/1:35,0:44:27.96:214,28,0	1/1:25,0:30:30.67:284,31,0	0/0:49,0:50:99:0,117,2606	0/1:17,0:26:18.29:139,0,18	1/1:25,7:25:36.05:554,36,0	1/1:11,19:30:30.86:482,31,0	1/1:51,76:118:70.54:1406,71,0	0/0:39,0:38:29.08:0,29,461	0/0:16,0:16:9.42:0,9,137	0/0:47,0:44:11.24:0,11,331	1/1:15,0:21:3.33:20,3,0	0/1:16,22:35:6.35:855,0,6	1/1:8,20:29:51.15:764,51,0	1/1:9,0:10:10.27:104,10,0
chr10	94774414	.	T	TGA	3886.74	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-1.788;DP=1095;FS=10.606;HRun=0;HaplotypeScore=402.7364;InbreedingCoeff=0.8423;MQ=44.68;MQ0=26;MQRankSum=2.688;QD=9.89;ReadPosRankSum=0.481;VQSLOD=2.4277;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,113,842	0/0:11,0:11:11.35:0,11,79	0/0:53,0:7:17.57:0,18,238	0/0:59,0:14:19.04:0,19,247	0/0:33,0:33:23.36:0,23,169	1/1:23,0:23:20.74:223,21,0	1/1:52,0:49:4.41:401,4,0	0/0:44,0:42:94.56:0,95,647	0/0:35,0:35:59.17:0,59,397	1/1:35,16:49:75.99:1200,76,0	1/1:15,7:20:17.31:268,17,0	0/1:55,0:53:43.42:448,0,43	1/1:31,0:28:9.65:397,10,0	1/1:43,0:40:11.32:281,11,0	0/0:44,0:44:46.90:0,47,331	0/0:29,0:29:62.22:0,62,427	0/0:47,0:47:99:0,132,1786	0/0:24,0:22:5.20:0,5,85	0/0:31,0:23:52.41:0,52,354	0/0:29,0:29:31.82:0,32,213	0/0:120,0:110:99:0,127,949	1/1:45,0:44:44.21:369,44,0	1/1:20,0:20:14.23:130,14,0	1/1:50,0:46:11.60:171,12,0	0/0:20,0:19:11.02:0,11,78	0/0:36,1:34:71.93:0,72,601	0/0:27,0:27:56.18:0,56,376	0/0:11,0:11:23.69:0,24,157
chr10	94774502	.	TGA	T	2842.31	PASS	AB=0.780;AC=10;AF=0.179;AN=56;BaseQRankSum=8.885;DP=1134;FS=1.345;HRun=0;HaplotypeScore=223.1970;InbreedingCoeff=-0.2185;MQ=49.92;MQ0=42;MQRankSum=0.210;QD=7.72;ReadPosRankSum=-3.136;VQSLOD=2.9647;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:49:99:0,135,2430	0/0:10,0:10:24.07:0,24,430	0/0:51,0:9:24.08:0,24,419	0/0:58,0:13:14.66:0,15,369	0/0:35,0:35:87.24:0,87,1543	0/1:15,9:21:99:264,0,172	0/1:38,11:44:99:337,0,276	0/0:51,0:50:99:0,141,2460	0/0:50,0:50:99:0,117,2138	0/1:38,8:34:99:273,0,627	0/1:8,7:14:99:117,0,158	0/1:35,13:41:99:652,0,201	0/1:23,5:23:99:204,0,227	0/1:33,15:44:99:414,0,376	0/0:37,0:37:93.04:0,93,1678	0/0:44,0:44:99:0,123,2322	0/0:37,0:37:99:0,103,1813	0/0:41,0:39:77.19:0,77,1551	0/0:38,0:31:87.30:0,87,1639	0/0:22,0:22:66.23:0,66,1240	0/0:136,1:131:99:0,277,5079	0/1:24,7:27:99:210,0,333	0/1:15,15:27:99:360,0,229	0/1:40,8:45:99:158,0,226	0/0:21,0:21:60.19:0,60,1105	0/0:33,0:32:76.19:0,76,1506	0/0:27,0:27:66.20:0,66,1206	0/0:23,0:23:69.08:0,69,1186
chr10	94774538	.	GTA	G	2195.01	PASS	AB=0.752;AC=9;AF=0.161;AN=56;BaseQRankSum=11.158;DP=1079;FS=18.161;HRun=0;HaplotypeScore=211.7733;InbreedingCoeff=-0.2011;MQ=49.89;MQ0=32;MQRankSum=-6.289;QD=7.65;ReadPosRankSum=1.788;VQSLOD=2.0763;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:63:99:0,158,2640	0/0:7,0:7:21.07:0,21,383	0/0:47,0:10:2.72:0,3,255	0/0:31,0:6:12.02:0,12,164	0/0:22,0:22:63.15:0,63,1029	0/1:16,9:23:99:206,0,195	0/1:31,18:47:99:406,0,459	0/0:42,0:41:99:0,117,1819	0/0:48,0:48:99:0,120,2029	0/1:26,17:34:99:595,0,264	0/1:11,2:11:58.53:59,0,156	0/1:23,15:35:99:277,0,360	0/1:18,7:20:99:162,0,230	0/1:26,14:36:99:385,0,206	0/0:43,0:42:99:0,99,1635	0/0:39,0:38:81.68:0,82,1488	0/0:37,0:37:87.57:0,88,1717	0/0:41,0:39:90.30:0,90,1761	0/0:33,0:31:87.22:0,87,1371	0/0:22,0:22:66.15:0,66,1140	0/0:146,0:143:99:0,313,5620	0/1:19,17:33:99:234,0,326	0/1:13,4:14:9.97:10,0,228	0/0:36,10:42:12.65:0,13,431	0/0:25,0:25:72.25:0,72,1286	0/0:43,0:41:99:0,115,2021	0/0:30,0:30:84.05:0,84,1341	0/0:25,0:25:72.23:0,72,1257
chr10	94775309	.	CTG	C	889.37	PASS	AB=0.903;AC=25;AF=0.481;AN=52;BaseQRankSum=3.051;DP=735;FS=13.396;HRun=0;HaplotypeScore=108.7776;InbreedingCoeff=-0.1365;MQ=55.95;MQ0=18;MQRankSum=-0.649;QD=1.68;ReadPosRankSum=3.441;VQSLOD=1.2902;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:6.49:0,6,78	1/1:4,0:6:2.54:21,3,0	./.	0/1:31,0:11:0:0,0,0	./.	0/1:18,0:18:7.91:8,0,34	0/1:30,10:39:29.72:114,0,30	0/0:36,0:35:1.25:0,1,3	0/1:19,0:28:19.17:19,0,32	0/1:24,0:23:11.45:11,0,18	0/0:24,0:25:17.70:0,18,198	0/1:18,4:24:23.91:137,0,24	1/1:14,5:20:11.57:107,12,0	0/1:16,4:19:33.55:34,0,77	0/1:16,0:28:0.13:0,0,0	1/1:18,0:24:11.36:56,11,0	0/1:26,1:30:52.17:52,0,333	0/1:16,0:18:13.53:14,0,59	0/1:22,0:20:2.26:2,0,67	0/0:24,0:23:13.81:0,14,140	0/1:57,1:54:45.25:45,0,331	0/1:26,0:26:32.99:53,0,33	1/1:21,0:21:3.01:33,3,0	1/1:29,13:41:27.50:269,28,0	0/0:18,0:17:5.64:0,6,41	0/1:24,1:23:21.78:22,0,67	0/0:17,0:17:9.03:0,9,131	0/1:20,0:19:42.72:43,0,230
chr10	94776244	.	TGGTCATCCCCCTGCTCCC	T	10259.92	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.412;DP=559;FS=0.962;HRun=0;HaplotypeScore=267.7504;InbreedingCoeff=0.9924;MQ=75.33;MQ0=0;MQRankSum=-11.615;QD=84.79;ReadPosRankSum=1.333;VQSLOD=4.0068;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,10853	0/0:7,0:7:21.07:0,21,1820	0/0:11,0:11:33.11:0,33,2156	0/0:13,0:13:27.09:0,27,1634	0/0:17,0:17:51.18:0,51,4263	0/0:20,0:20:57.20:0,57,4408	0/0:40,0:40:99:0,117,8884	1/1:3,8:11:24.08:1190,24,0	0/0:20,0:20:60.21:0,60,4799	0/0:23,0:23:69.24:0,69,5618	0/0:12,0:12:33.11:0,33,2521	0/0:29,0:29:84.29:0,84,7175	0/0:20,0:20:60.21:0,60,5232	0/0:19,0:19:54.19:0,54,4642	0/0:15,0:15:45.15:0,45,3654	0/0:16,0:16:48.16:0,48,4011	0/0:26,0:26:75.23:0,75,5956	0/0:32,0:32:93.28:0,93,6957	1/1:7,9:16:24.06:877,24,0	1/1:0,9:9:27.09:1263,27,0	1/1:13,18:31:41.89:1840,42,0	0/0:17,0:17:51.18:0,51,4138	0/0:14,0:14:42.14:0,42,3359	0/0:21,0:21:60.21:0,60,4174	0/0:18,0:18:54.19:0,54,4594	1/1:4,13:17:36.12:1747,36,0	1/1:5,20:25:57.20:2720,57,0	1/1:5,7:12:12.04:624,12,0
chr10	94777189	.	C	CA	278.41	PASS	AC=12;AF=0.300;AN=40;BaseQRankSum=2.159;DP=54;FS=0.000;HRun=0;HaplotypeScore=16.6701;InbreedingCoeff=0.5459;MQ=98.82;MQ0=0;MQRankSum=-1.452;QD=23.20;ReadPosRankSum=2.794;VQSLOD=4.6838;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:14.18:0,14,113	./.	0/0:3,0:3:9.01:0,9,83	0/0:3,0:3:8.97:0,9,73	./.	1/1:0,1:1:3.01:44,3,0	1/1:0,4:4:12.03:140,12,0	0/0:4,0:4:8.95:0,9,72	0/0:1,0:1:2.96:0,3,19	./.	./.	1/1:1,0:1:3.01:31,3,0	./.	1/1:0,2:2:6.01:72,6,0	0/0:1,0:1:3:0,3,25	0/0:3,0:3:8.80:0,9,59	0/0:1,0:1:3:0,3,29	0/0:1,0:1:3:0,3,25	0/0:2,0:2:5.90:0,6,42	./.	0/0:6,0:6:14.32:0,14,99	./.	1/1:0,3:3:8.81:84,9,0	1/1:0,1:1:3.01:39,3,0	./.	0/0:4,0:4:11.97:0,12,116	0/0:2,0:2:5.97:0,6,45	0/0:1,0:1:3:0,3,26
chr10	94778307	.	C	CT	441.90	PASS	AB=0.958;AC=40;AF=0.833;AN=48;BaseQRankSum=2.243;DP=193;FS=8.062;HRun=13;HaplotypeScore=85.8013;InbreedingCoeff=0.1264;MQ=42.85;MQ0=55;MQRankSum=0.049;QD=2.78;ReadPosRankSum=-0.752;VQSLOD=-0.1434;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:8:5.02:28,0,5	1/1:1,0:1:2.90:16,3,0	./.	0/0:12,0:4:0.65:0,1,32	1/1:3,0:2:3.68:15,4,0	1/1:4,0:3:1.83:5,2,0	0/1:8,2:8:6.28:54,0,6	1/1:18,1:10:9.97:65,10,0	1/1:11,0:10:20.58:96,21,0	1/1:14,0:7:11.70:50,12,0	1/1:3,1:4:6.15:29,6,0	1/1:7,0:3:4.69:19,5,0	1/1:7,0:4:5.68:28,6,0	./.	1/1:8,0:6:7.51:33,8,0	1/1:3,2:3:0.14:1,0,0	1/1:9,0:8:3.33:21,3,0	1/1:6,0:1:1.82:5,2,0	0/1:6,0:4:10.17:10,0,12	1/1:2,0:2:2.74:12,3,0	1/1:4,0:2:2.50:9,2,0	1/1:3,0:2:0.47:1,0,0	0/0:3,1:2:2.98:0,3,21	1/1:8,1:8:1.72:3,2,0	./.	0/1:7,0:4:6.38:19,0,6	1/1:10,0:8:3.11:33,3,0	./.
chr10	94778319	.	TTGGTTC	T	1541.38	PASS	AB=0.973;AC=33;AF=0.688;AN=48;BaseQRankSum=3.919;DP=186;FS=4.629;HRun=0;HaplotypeScore=41.1135;InbreedingCoeff=-0.1453;MQ=40.57;MQ0=32;MQRankSum=-1.726;QD=10.14;ReadPosRankSum=2.937;VQSLOD=1.1952;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,1:8:35.11:103,0,35	1/1:1,0:1:0.89:2,1,0	./.	0/0:12,0:4:1.96:0,2,64	0/1:2,0:2:5.91:42,0,6	1/1:2,2:3:9.03:178,9,0	0/1:10,2:8:0.69:157,0,1	0/1:17,0:10:81.55:82,0,137	0/1:10,0:10:27.51:174,0,28	0/1:15,0:10:61.97:62,0,107	1/1:5,1:5:5.38:65,5,0	1/1:6,0:3:1.68:44,2,0	1/1:6,0:4:9.03:128,9,0	./.	0/1:8,0:6:5.09:69,0,5	0/1:7,0:4:19.95:46,0,20	1/1:8,0:8:13.34:94,13,0	1/1:3,0:1:3.01:54,3,0	0/1:5,0:5:23.45:91,0,23	0/0:5,0:5:1.42:0,1,5	1/1:2,0:2:3.01:48,3,0	1/1:6,1:6:6.01:80,6,0	1/1:5,0:3:2.94:18,3,0	1/1:10,0:9:3.89:12,4,0	./.	0/0:7,0:5:0.59:0,1,53	1/1:9,0:8:4.47:121,4,0	./.
chr10	94778320	.	TGG	T	919.80	PASS	AB=0.855;AC=29;AF=0.604;AN=48;BaseQRankSum=5.045;DP=185;FS=3.731;HRun=2;HaplotypeScore=34.0321;InbreedingCoeff=-0.1761;MQ=40.68;MQ0=32;MQRankSum=0.920;QD=6.09;ReadPosRankSum=4.114;VQSLOD=-0.0030;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:8:54.06:54,0,71	0/0:0,0:1:1.25:0,1,3	./.	0/0:11,0:4:0.79:0,1,60	0/1:1,1:2:10.64:25,0,11	1/1:3,0:3:9.02:95,9,0	0/1:11,1:8:20.49:110,0,20	0/1:14,0:10:32.59:33,0,167	0/1:9,0:10:44.98:120,0,45	0/1:13,1:10:72.59:73,0,139	1/1:4,2:5:4.91:45,5,0	0/1:5,0:3:1.07:32,0,1	1/1:2,4:4:9.03:117,9,0	./.	0/1:6,1:6:11.04:48,0,11	0/1:7,0:4:18.15:18,0,26	1/1:7,0:8:9.62:56,10,0	1/1:2,0:1:3:29,3,0	0/1:3,0:5:37.23:69,0,37	0/0:5,0:5:0.60:0,1,9	1/1:1,0:2:3.01:32,3,0	1/1:7,0:6:5.23:40,5,0	1/1:5,0:3:0.47:1,0,0	1/1:8,2:9:1.92:4,2,0	./.	0/0:7,0:5:11.81:0,12,91	0/1:8,0:8:6.47:52,0,6	./.
chr10	94778332	.	T	TGG	512.40	PASS	AB=0.851;AC=18;AF=0.391;AN=46;BaseQRankSum=1.111;DP=142;FS=0.000;HRun=0;HaplotypeScore=46.0431;InbreedingCoeff=-0.0318;MQ=35.14;MQ0=22;MQRankSum=-1.022;QD=5.63;ReadPosRankSum=2.469;VQSLOD=2.2409;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:4,1:4:30.62:69,0,31	./.	./.	0/0:8,0:2:2.97:0,3,21	1/1:5,1:5:2.22:35,2,0	1/1:2,2:4:11.90:127,12,0	1/1:6,2:5:11.01:117,11,0	0/1:9,1:4:23.72:32,0,24	0/1:9,0:9:29.54:40,0,30	0/1:9,0:7:36.70:43,0,37	0/1:7,1:7:0.66:4,0,1	0/1:2,1:2:8:37,0,8	0/0:4,0:3:6.19:0,6,31	./.	0/1:4,2:5:3.67:19,0,4	0/1:4,0:4:3.41:6,0,3	0/0:3,2:5:0.47:0,0,1	0/0:4,0:2:3.01:0,3,36	0/1:3,2:5:58.18:73,0,58	0/0:4,0:4:6.02:0,6,69	0/0:2,0:2:0.47:0,0,1	1/1:7,1:8:5.18:33,5,0	0/0:4,0:2:1.25:0,1,3	0/0:3,0:2:2.92:0,3,17	./.	0/0:6,0:3:3.01:0,3,30	0/1:3,3:6:6.80:7,0,23	./.
chr10	94779372	.	T	TG	4824.07	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-10.236;DP=655;FS=5.486;HRun=8;HaplotypeScore=69.1945;InbreedingCoeff=0.9920;MQ=87.59;MQ0=1;MQRankSum=-1.495;QD=27.25;ReadPosRankSum=2.707;VQSLOD=5.6214;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,132,1199	0/0:10,0:10:24.01:0,24,220	0/0:32,0:31:54.87:0,55,487	0/0:31,0:28:59.63:0,60,525	0/0:29,0:29:69.02:0,69,631	1/1:5,15:20:14.66:422,15,0	1/1:1,24:25:66.20:762,66,0	0/0:27,0:27:69.02:0,69,628	0/0:18,0:18:48.02:0,48,439	0/0:25,0:25:69.03:0,69,628	0/0:26,0:26:47.91:0,48,425	1/1:5,14:19:39.12:450,39,0	1/1:2,12:14:36.11:416,36,0	1/1:5,15:21:50.97:556,51,0	0/0:23,0:23:59.97:0,60,537	0/0:24,0:24:59.98:0,60,541	0/0:26,0:26:72.04:0,72,659	0/0:17,0:17:44.99:0,45,401	0/0:18,0:19:44.05:0,44,390	0/0:20,0:20:51.02:0,51,466	0/0:22,0:22:54.01:0,54,494	1/1:4,32:36:62.39:973,62,0	1/1:2,17:19:48.14:553,48,0	1/1:2,21:23:60.65:693,61,0	0/0:17,0:17:42.02:0,42,384	0/0:19,0:19:48.02:0,48,439	0/0:24,0:24:56.02:0,56,490	0/0:16,1:18:12.43:0,12,356
chr10	94780705	.	A	AGTGTGTGT	3597.82	PASS	AB=1.000;AC=42;AF=0.840;AN=50;BaseQRankSum=0.150;DP=616;FS=5.146;HRun=0;HaplotypeScore=163.0206;InbreedingCoeff=0.1252;MQ=54.26;MQ0=18;MQRankSum=-1.340;QD=6.87;ReadPosRankSum=-1.164;VQSLOD=2.4144;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:7.82:93,8,0	./.	0/1:35,0:15:0:0,0,0	./.	1/1:18,0:23:2.99:23,3,0	0/1:15,0:15:29.88:30,0,87	1/1:23,0:22:17.82:66,18,0	1/1:32,0:32:23.71:278,24,0	1/1:11,0:11:6.02:104,6,0	1/1:26,0:25:5.71:33,6,0	1/1:11,0:11:6.01:90,6,0	1/1:17,0:17:13.64:65,14,0	0/1:24,0:24:1.08:81,0,1	1/1:16,0:15:5.44:28,5,0	1/1:2,9:15:11.96:334,12,0	1/1:17,0:17:17.73:312,18,0	0/0:34,0:38:31.98:0,32,1039	1/1:22,0:22:18.56:360,19,0	1/1:17,0:17:5.71:112,6,0	1/1:19,0:19:3.44:100,3,0	1/1:30,0:28:9.90:112,10,0	0/1:19,0:19:14.63:15,0,25	0/1:20,0:20:4.25:55,0,4	0/1:25,0:25:76.15:90,0,76	1/1:26,0:25:21.03:408,21,0	1/1:30,0:29:25.80:438,26,0	1/1:20,2:22:22.80:371,23,0	./.
chr10	94780714	.	G	GTGTA	4622.02	PASS	AB=0.913;AC=23;AF=0.411;AN=56;BaseQRankSum=-2.583;DP=630;FS=11.325;HRun=0;HaplotypeScore=121.5707;InbreedingCoeff=0.2022;MQ=51.96;MQ0=19;MQRankSum=4.594;QD=13.06;ReadPosRankSum=9.491;VQSLOD=2.4340;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:19.90:0,20,238	0/0:4,0:4:2.94:0,3,18	0/0:37,0:13:24.34:0,24,211	0/0:49,0:16:32.77:0,33,286	0/0:21,0:21:23.68:0,24,186	0/1:2,14:17:2.21:409,0,2	1/1:1,23:23:11.10:552,11,0	0/0:31,0:31:57.21:0,57,440	0/1:12,0:12:50.37:50,0,80	0/1:26,0:25:99:221,0,150	0/1:10,0:10:50:89,0,50	0/1:1,18:20:5.85:342,0,6	1/1:4,18:26:27.06:667,27,0	1/1:5,9:14:6.02:158,6,0	0/1:16,0:16:26:133,0,26	0/1:16,0:16:29.22:29,0,118	0/0:36,0:36:58.77:0,59,1132	0/0:23,0:23:32.55:0,33,345	0/0:17,0:16:13.30:0,13,274	0/0:19,0:19:15.83:0,16,163	0/1:31,0:29:0.02:0,0,248	1/1:3,17:21:10.55:279,11,0	1/1:2,17:20:27.07:669,27,0	1/1:5,20:25:22.78:949,23,0	0/1:23,0:22:41.02:41,0,260	0/1:31,0:29:18.32:18,0,445	0/1:21,0:21:14.89:15,0,289	0/0:4,0:4:5.96:0,6,43
chr10	94780716	.	G	GTA	2176.88	PASS	AB=0.986;AC=18;AF=0.321;AN=56;BaseQRankSum=5.656;DP=624;FS=9.769;HRun=0;HaplotypeScore=113.4319;InbreedingCoeff=0.4802;MQ=50.59;MQ0=18;MQRankSum=3.518;QD=9.59;ReadPosRankSum=9.481;VQSLOD=1.2531;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:37.50:0,37,286	0/0:4,0:4:2.94:0,3,18	0/0:37,0:13:24.35:0,24,212	0/0:49,0:15:28.96:0,29,293	0/0:21,0:21:23.77:0,24,188	1/1:16,1:17:8.92:214,9,0	1/1:23,0:22:11.08:223,11,0	0/0:28,0:28:65.56:0,66,503	0/1:13,0:13:9.89:10,0,99	0/1:26,0:25:99:219,0,172	0/1:10,0:10:49.87:50,0,56	0/1:20,0:20:1.92:154,0,2	1/1:24,1:25:8.11:303,8,0	1/1:11,2:12:6.01:65,6,0	0/1:16,0:16:14.60:15,0,30	0/0:16,0:16:10.41:0,10,152	0/0:36,0:36:78.47:0,78,983	0/0:24,0:24:62.84:0,63,440	0/0:17,0:16:41.10:0,41,313	0/0:19,0:19:27.30:0,27,204	0/0:32,0:30:37.27:0,37,286	0/1:19,2:21:6.54:195,0,7	1/1:19,1:20:26.37:326,26,0	1/1:19,4:23:36.47:586,36,0	0/0:23,0:22:44.91:0,45,322	0/0:31,0:29:56.38:0,56,507	0/0:22,0:22:44.74:0,45,395	0/0:4,0:4:5.96:0,6,43
chr10	94783092	.	ATGATCTACACGAGCTTTC	A	7013.52	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.979;DP=691;FS=0.560;HRun=0;HaplotypeScore=356.9949;InbreedingCoeff=0.9337;MQ=87.96;MQ0=0;MQRankSum=-11.278;QD=50.82;ReadPosRankSum=-0.234;VQSLOD=3.0132;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,102,7941	0/0:8,0:8:24.08:0,24,1633	0/0:29,0:29:27.07:0,27,1203	0/0:25,0:24:39.09:0,39,1986	0/0:19,0:19:51.18:0,51,3399	1/1:10,10:20:9.03:443,9,0	1/1:8,6:14:6.02:295,6,0	0/0:42,0:42:84.29:0,84,5425	0/0:20,0:20:36.12:0,36,2891	0/0:28,0:28:66.23:0,66,4861	0/0:25,0:25:63.22:0,63,4702	1/1:12,14:26:27.09:1313,27,0	1/1:7,15:22:42.14:2046,42,0	1/1:8,12:20:30.10:1461,30,0	0/0:31,0:31:72.25:0,72,5601	0/0:32,0:32:84.29:0,84,6117	0/0:25,0:25:48.15:0,48,3521	0/0:23,0:23:45.15:0,45,3565	0/0:25,0:25:42.14:0,42,2897	0/0:22,0:22:42.14:0,42,3292	0/0:46,0:46:99:0,99,7892	1/1:13,12:25:18.06:870,18,0	1/1:5,6:11:12.04:586,12,0	0/0:20,5:25:0.94:0,1,1	0/0:19,0:19:36.12:0,36,2776	0/0:34,0:34:78.26:0,78,6106	0/0:18,0:18:48.16:0,48,3363	0/0:15,0:15:39.13:0,39,2884
chr10	94784388	.	A	AT	6010.72	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-10.161;DP=500;FS=4.754;HRun=9;HaplotypeScore=85.5566;InbreedingCoeff=0.9020;MQ=65.15;MQ0=6;MQRankSum=-3.082;QD=21.16;ReadPosRankSum=-2.511;VQSLOD=4.4964;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,10:21:38.93:407,39,0	1/1:4,1:5:4.83:38,5,0	0/1:16,0:11:11.76:12,0,42	0/0:14,0:12:9.01:0,9,134	1/1:5,13:18:34.67:403,35,0	0/0:19,0:19:35.96:0,36,312	0/0:21,0:19:41.97:0,42,364	1/1:8,26:34:72.12:783,72,0	1/1:4,9:13:30.03:318,30,0	0/0:23,0:22:47.93:0,48,415	0/0:19,0:19:44.91:0,45,383	0/0:19,0:19:35.53:0,36,307	0/0:12,0:10:26.99:0,27,234	0/0:8,0:8:20.98:0,21,182	1/1:13,8:21:36.07:382,36,0	1/1:10,8:18:39.28:382,39,0	0/0:32,0:30:74.67:0,75,625	1/1:7,6:14:23.86:233,24,0	1/1:5,10:16:34.53:383,35,0	1/1:5,13:18:16.08:405,16,0	1/1:2,5:8:17.88:180,18,0	0/0:11,0:11:32.99:0,33,286	0/0:21,0:20:38.93:0,39,338	0/0:17,0:16:35.98:0,36,312	1/1:1,23:24:63.13:679,63,0	1/1:1,9:10:24.04:248,24,0	1/1:7,17:24:60.11:640,60,0	1/1:10,10:21:51.80:518,52,0
chr10	94784402	.	C	CT	1983.54	PASS	AB=0.870;AC=28;AF=0.500;AN=56;BaseQRankSum=-6.388;DP=496;FS=14.022;HRun=14;HaplotypeScore=91.6076;InbreedingCoeff=0.6864;MQ=55.24;MQ0=16;MQRankSum=-4.601;QD=7.57;ReadPosRankSum=-4.339;VQSLOD=0.0431;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,13:20:8.60:188,9,0	1/1:3,1:4:6:53,6,0	1/1:10,0:7:4.91:14,5,0	0/0:8,0:7:2.86:0,3,17	1/1:13,9:23:11.16:124,11,0	0/0:4,0:16:20.35:0,20,59	0/0:5,0:16:18.30:0,18,53	1/1:29,6:37:27.11:207,27,0	1/1:11,3:13:20.39:147,20,0	0/0:11,0:24:28.95:0,29,85	0/0:9,0:19:14.05:0,14,41	0/0:5,0:20:24.01:0,24,70	0/0:4,0:10:10.16:0,10,29	0/0:6,0:9:5.84:0,6,17	1/1:7,8:15:10.71:211,11,0	1/1:12,4:17:5.91:184,6,0	0/0:29,0:28:39.25:0,39,242	1/1:13,4:14:2.77:120,3,0	0/1:13,2:15:3.34:82,0,3	1/1:16,11:27:29.74:235,30,0	0/1:5,1:4:10.27:41,0,10	0/0:5,0:16:12.15:0,12,35	0/0:6,0:17:14.22:0,14,41	0/0:9,0:14:16.05:0,16,47	0/0:24,0:25:4.65:0,5,71	1/1:7,2:9:9.46:78,9,0	1/1:18,6:27:3.60:246,4,0	1/1:8,8:16:12.92:254,13,0
chr10	94784936	.	GCA	G	3512.23	PASS	AB=0.692;AC=14;AF=0.259;AN=54;BaseQRankSum=-6.224;DP=744;FS=6.832;HRun=0;HaplotypeScore=152.3730;InbreedingCoeff=0.4598;MQ=61.69;MQ0=12;MQRankSum=5.351;QD=13.20;ReadPosRankSum=3.418;VQSLOD=2.8784;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,19:34:0.96:410,0,1	0/0:6,0:10:12:0,12,105	./.	0/0:41,0:20:9.03:0,9,127	0/0:14,0:30:19.24:0,19,155	0/1:14,16:31:77.58:373,0,78	0/1:20,8:32:19.97:347,0,20	0/0:25,0:33:35.91:0,36,412	0/0:12,0:36:56.99:0,57,527	0/0:23,0:27:26.94:0,27,382	0/0:9,0:17:11.39:0,11,66	1/1:11,16:29:50.81:537,51,0	0/1:9,15:25:39.67:407,0,40	0/1:12,10:25:7.32:309,0,7	0/0:6,0:17:17.54:0,18,175	0/0:13,0:38:48.38:0,48,423	0/1:19,3:22:28.73:29,0,443	0/0:8,0:24:26.99:0,27,236	0/0:9,0:16:26.52:0,27,241	0/0:19,0:31:23.22:0,23,164	0/0:28,0:29:24.15:0,24,252	1/1:7,21:29:48.14:543,48,0	1/1:7,2:10:8.86:82,9,0	1/1:11,12:28:50.30:477,50,0	0/0:12,0:30:38.67:0,39,325	0/0:14,0:32:53.73:0,54,393	0/0:5,0:19:29.70:0,30,246	0/0:7,0:18:18.01:0,18,177
chr10	94786149	.	T	TG	4417.51	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-11.675;DP=700;FS=1.644;HRun=7;HaplotypeScore=76.8919;InbreedingCoeff=0.9984;MQ=88.99;MQ0=0;MQRankSum=-1.221;QD=26.45;ReadPosRankSum=1.818;VQSLOD=5.6340;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,135,1303	0/0:8,0:8:24:0,24,223	0/0:24,0:24:51.05:0,51,481	0/0:30,0:29:68.17:0,68,608	0/0:26,0:26:72.10:0,72,689	1/1:5,21:26:60.18:725,60,0	1/1:2,19:21:48.15:580,48,0	0/0:31,0:31:60.07:0,60,570	0/0:21,0:21:54.07:0,54,516	0/0:28,0:28:72.10:0,72,692	0/0:19,0:19:39.06:0,39,376	1/1:2,21:23:51.16:615,51,0	1/1:1,19:20:42.13:507,42,0	1/1:3,20:23:50.93:616,51,0	0/0:18,0:18:44.99:0,45,417	0/0:16,0:16:48.03:0,48,445	0/0:41,0:41:99:0,108,1043	0/0:40,0:40:99:0,111,1058	0/0:31,0:32:77.14:0,77,730	0/0:14,0:14:30.03:0,30,284	0/0:53,1:55:97.99:0,98,1213	1/1:3,10:13:21.02:253,21,0	1/1:2,11:13:23.71:288,24,0	1/1:0,28:28:69.21:834,69,0	0/0:25,0:25:75.11:0,75,718	0/0:26,0:26:69.10:0,69,665	0/0:20,0:20:57.09:0,57,550	0/0:10,0:10:30.05:0,30,290
chr10	94786866	.	ACCT	A	1230.81	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.124;DP=684;FS=2.417;HRun=0;HaplotypeScore=118.1115;InbreedingCoeff=0.9795;MQ=72.48;MQ0=0;MQRankSum=-6.875;QD=30.77;ReadPosRankSum=-0.635;VQSLOD=3.9593;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:96.33:0,96,2025	0/0:7,0:7:18.06:0,18,381	0/0:17,0:17:30.10:0,30,545	0/0:17,0:17:38.08:0,38,652	0/0:18,0:18:48.16:0,48,1008	0/0:23,0:23:63.17:0,63,1265	0/0:39,0:39:99:0,105,2207	0/0:23,0:22:45.15:0,45,916	0/0:22,0:22:51.17:0,51,1057	1/1:8,24:32:78.26:1166,78,0	1/1:5,3:8:12.04:181,12,0	0/0:22,0:22:51.11:0,51,982	0/0:21,0:21:48.16:0,48,1016	0/0:27,0:27:60.16:0,60,1213	0/0:22,0:22:42.14:0,42,891	0/0:26,0:26:60.20:0,60,1226	0/0:28,0:28:75.26:0,75,1590	0/0:32,0:32:57.20:0,57,1209	0/0:16,0:16:45.14:0,45,914	0/0:28,0:28:78.27:0,78,1633	0/0:31,0:31:66.21:0,66,1340	0/0:22,0:22:57.18:0,57,1169	0/0:19,0:19:51.18:0,51,1076	0/0:32,0:32:90.30:0,90,1823	0/0:31,0:31:63.22:0,63,1334	0/0:27,0:27:72.25:0,72,1500	0/0:29,0:29:75.26:0,75,1559	0/0:22,0:22:60.21:0,60,1251
chr10	94786896	.	AT	A	2468.95	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.559;DP=655;FS=2.250;HRun=2;HaplotypeScore=115.3044;InbreedingCoeff=0.9980;MQ=75.33;MQ0=0;MQRankSum=-5.412;QD=37.41;ReadPosRankSum=0.950;VQSLOD=3.3910;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:96.32:1342,96,0	0/0:7,0:7:21.07:0,21,336	0/0:16,0:16:40.57:0,41,510	0/0:27,0:27:69.16:0,69,948	0/0:21,0:21:54.18:0,54,861	0/0:23,0:23:66.23:0,66,1053	0/0:41,0:41:99:0,114,1803	0/0:17,0:17:51.17:0,51,793	0/0:24,0:24:39.13:0,39,621	1/1:0,20:20:60.20:838,60,0	1/1:0,11:11:33.06:432,33,0	0/0:14,0:14:42.14:0,42,663	0/0:19,0:19:57.19:0,57,907	0/0:25,0:25:69.23:0,69,1088	0/0:18,0:18:29.86:0,30,479	0/0:16,0:16:30.10:0,30,480	0/0:36,0:36:99:0,108,1701	0/0:34,0:34:35.58:0,36,575	0/0:16,0:16:48.16:0,48,767	0/0:27,0:27:81.28:0,81,1288	0/0:29,0:29:63.19:0,63,981	0/0:21,0:21:63.20:0,63,983	0/0:19,0:19:57.19:0,57,908	0/0:42,0:42:99:0,121,1914	0/0:27,0:27:45.11:0,45,719	0/0:26,0:26:78.19:0,78,1152	0/0:31,0:31:93.32:0,93,1480	0/0:13,0:13:39.13:0,39,623
chr10	94786912	.	CCTACTGTCTGCCAA	C	2382.51	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.374;DP=631;FS=0.000;HRun=0;HaplotypeScore=265.1747;InbreedingCoeff=0.9880;MQ=84.17;MQ0=0;MQRankSum=-6.471;QD=108.30;ReadPosRankSum=0.477;VQSLOD=3.1940;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,7577	0/0:7,0:7:21.07:0,21,1438	0/0:28,0:28:73.54:0,74,4164	0/0:25,0:24:63.22:0,63,3382	0/0:19,0:19:51.18:0,51,3513	0/0:24,0:24:72.23:0,72,4602	0/0:36,0:36:96.33:0,96,6128	0/0:21,0:21:63.20:0,63,3839	0/0:23,0:23:32.86:0,33,1627	1/1:0,13:13:39.13:1721,39,0	1/1:0,9:9:18.02:781,18,0	0/0:15,0:15:42.10:0,42,2528	0/0:21,0:21:63.19:0,63,4224	0/0:25,0:25:72.25:0,72,4731	0/0:23,0:23:35.95:0,36,1836	0/0:12,0:12:18.53:0,19,1234	0/0:36,0:36:99:0,108,7474	0/0:31,0:31:23.97:0,24,1513	0/0:20,0:20:60.21:0,60,3704	0/0:22,0:22:66.18:0,66,4035	0/0:28,0:28:54.17:0,54,3512	0/0:20,0:20:60.20:0,60,3976	0/0:12,0:12:33.11:0,33,2117	0/0:43,0:43:99:0,120,8332	0/0:25,0:25:39.12:0,39,2107	0/0:17,0:17:51.18:0,51,3535	0/0:28,0:28:84.29:0,84,5858	0/0:9,0:9:27.09:0,27,1597
chr10	94786946	.	CTCTG	C	5815.83	PASS	AB=0.996;AC=35;AF=0.625;AN=56;BaseQRankSum=-4.612;DP=611;FS=0.000;HRun=0;HaplotypeScore=146.6013;InbreedingCoeff=-0.1880;MQ=66.31;MQ0=16;MQRankSum=1.371;QD=11.84;ReadPosRankSum=4.195;VQSLOD=4.3591;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,1:30:10.24:523,0,10	1/1:5,0:6:14.97:152,15,0	0/0:44,0:23:64.92:0,65,521	0/0:39,0:17:47.90:0,48,443	1/1:2,18:20:6.01:119,6,0	0/1:22,0:23:56.81:240,0,57	0/1:18,0:18:84.85:186,0,85	1/1:20,0:20:29.57:393,30,0	1/1:1,18:20:12.04:218,12,0	1/1:8,0:24:56.47:531,56,0	1/1:6,0:10:3.01:39,3,0	0/1:13,0:13:29.90:137,0,30	0/1:14,0:18:99:141,0,151	0/1:21,0:24:99:229,0,107	1/1:0,20:22:18.53:358,19,0	1/1:0,9:9:5.86:118,6,0	0/0:37,0:37:76.80:0,77,1274	1/1:1,32:33:20.80:396,21,0	0/1:16,0:16:99:176,0,102	0/1:13,0:14:37.14:185,0,37	0/1:19,0:33:49.29:247,0,49	0/1:17,0:17:74.97:214,0,75	0/1:10,0:10:63.45:63,0,71	0/1:37,0:40:99:270,0,225	1/1:1,18:20:12.04:219,12,0	0/1:17,0:18:95.28:249,0,95	0/1:23,0:24:34.79:332,0,35	0/1:7,0:7:54.56:79,0,55
chr10	94786948	.	CTG	C	433.96	PASS	AB=0.940;AC=20;AF=0.385;AN=52;BaseQRankSum=1.785;DP=711;FS=13.099;HRun=0;HaplotypeScore=178.7695;InbreedingCoeff=0.6702;MQ=61.03;MQ0=17;MQRankSum=1.388;QD=1.79;ReadPosRankSum=2.854;VQSLOD=2.0253;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:33:50.79:104,0,51	1/1:7,0:7:2.92:17,3,0	./.	./.	1/1:21,0:21:5.81:31,6,0	0/0:28,0:28:13.55:0,14,117	0/0:27,0:27:16.83:0,17,160	0/0:26,0:26:15.78:0,16,81	1/1:21,0:21:9.80:58,10,0	1/1:26,0:26:7.39:88,7,0	1/1:10,0:10:2.71:14,3,0	0/0:17,0:17:5.89:0,6,47	0/0:21,0:21:24.41:0,24,198	0/0:29,0:29:17.98:0,18,166	1/1:22,0:22:17.89:94,18,0	1/1:9,0:9:5.78:31,6,0	0/1:32,4:37:14.07:14,0,371	1/1:35,0:33:20.09:107,20,0	0/0:19,0:19:27.27:0,27,211	0/0:25,0:25:12.46:0,12,114	0/0:38,0:38:14.96:0,15,121	0/0:32,0:32:21.92:0,22,198	0/0:14,0:14:9:0,9,89	0/0:47,0:45:32.93:0,33,333	1/1:20,0:20:11.55:61,12,0	0/0:26,0:26:36.82:0,37,295	0/0:29,0:29:21.27:0,21,156	0/0:10,0:10:11.82:0,12,80
chr10	94787538	.	AAGCGTGCGCGCG	A	4176.12	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=6.384;DP=443;FS=2.630;HRun=0;HaplotypeScore=185.2037;InbreedingCoeff=0.6929;MQ=64.50;MQ0=2;MQRankSum=-8.075;QD=27.47;ReadPosRankSum=5.738;VQSLOD=2.5048;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:14.89:0,15,110	0/0:6,0:6:11.92:0,12,104	0/0:6,0:5:11.90:0,12,142	0/0:13,0:10:26.83:0,27,392	0/0:10,0:10:23.85:0,24,228	1/1:4,2:17:18.06:527,18,0	1/1:9,3:15:15.05:364,15,0	0/0:21,0:21:54.11:0,54,1291	0/1:11,0:11:21.27:21,0,245	0/1:14,0:14:99:248,0,188	0/0:13,0:13:23.08:0,23,248	1/1:0,10:16:24.08:908,24,0	1/1:0,6:12:24.08:883,24,0	1/1:1,14:16:12.04:463,12,0	0/0:13,0:13:38.79:0,39,388	0/1:10,0:10:18.43:18,0,208	0/0:33,0:33:99:0,99,4303	0/0:14,0:14:24:0,24,277	0/0:23,0:22:66.07:0,66,1564	0/0:24,0:24:56.94:0,57,630	0/0:27,0:27:42.11:0,42,936	1/1:6,1:10:6.02:148,6,0	1/1:0,8:12:3.48:99,3,0	1/1:9,6:18:19.98:497,20,0	0/0:15,0:15:36.08:0,36,393	0/0:29,0:29:82.84:0,83,2087	0/0:12,0:12:33.10:0,33,807	0/0:6,0:6:15.03:0,15,304
chr10	94787539	.	AGCGTGCGC	A	3199.27	PASS	AB=1.000;AC=35;AF=0.700;AN=50;BaseQRankSum=9.180;DP=436;FS=0.608;HRun=0;HaplotypeScore=159.7380;InbreedingCoeff=0.4329;MQ=62.25;MQ0=3;MQRankSum=-9.009;QD=10.96;ReadPosRankSum=0.925;VQSLOD=2.8149;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:6,0:5:2.97:0,3,20	0/0:11,0:8:2.31:0,2,21	./.	1/1:17,0:17:12.04:225,12,0	1/1:15,0:15:6.02:113,6,0	0/0:21,0:21:23.51:0,24,241	1/1:11,0:11:14.97:177,15,0	1/1:12,2:14:29.84:656,30,0	1/1:11,2:13:0.37:1,0,0	1/1:16,0:16:24.08:426,24,0	1/1:12,0:12:24.08:420,24,0	1/1:17,0:16:12.04:224,12,0	1/1:13,0:13:15:154,15,0	1/1:10,0:10:12.02:174,12,0	0/0:33,0:33:72.16:0,72,2431	1/1:13,0:13:3.01:36,3,0	0/1:22,0:21:71.61:72,0,249	1/1:24,0:24:6.02:86,6,0	0/0:28,0:27:4.56:0,5,116	1/1:10,0:10:3.01:56,3,0	1/1:12,0:12:3.48:57,3,0	1/1:18,0:18:9.02:168,9,0	1/1:16,0:15:17.95:214,18,0	0/1:27,0:27:74.01:74,0,290	0/1:12,0:12:26.11:26,0,138	0/0:6,0:6:5.92:0,6,41
chr10	94787541	.	CGTGCGCGCGT	C	3189.09	PASS	AB=1.000;AC=22;AF=0.407;AN=54;BaseQRankSum=9.889;DP=424;FS=5.349;HRun=0;HaplotypeScore=168.4979;InbreedingCoeff=0.4394;MQ=59.90;MQ0=3;MQRankSum=-8.575;QD=16.78;ReadPosRankSum=4.459;VQSLOD=2.4381;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:6:2.98:0,3,22	0/0:3,0:3:5.84:0,6,39	0/0:11,0:8:14.32:0,14,141	0/0:8,0:8:5.99:0,6,49	1/1:17,0:17:18:376,18,0	1/1:16,0:15:14.89:219,15,0	0/0:20,0:20:36.05:0,36,705	0/1:10,0:10:38.97:70,0,39	0/1:13,0:13:51.85:540,0,52	0/0:12,0:12:8.18:0,8,73	1/1:16,0:16:24.08:548,24,0	1/1:12,0:12:24.08:572,24,0	1/1:17,0:16:12.04:288,12,0	0/1:13,0:13:36.81:37,0,37	0/1:10,0:10:36.07:83,0,36	0/0:35,0:35:90.23:0,90,3548	0/1:12,0:12:3.12:3,0,66	0/0:21,0:20:30.71:0,31,844	0/0:22,0:22:19.41:0,19,143	0/0:28,0:27:27.99:0,28,468	1/1:10,0:10:5.99:122,6,0	1/1:12,0:12:3.01:101,3,0	1/1:18,0:18:20.93:351,21,0	0/1:14,0:13:31.56:69,0,32	0/0:27,0:27:67.32:0,67,1181	0/0:12,0:12:29.62:0,30,452	0/0:5,0:5:12:0,12,180
chr10	94787543	.	TGCGCGCGTGCGCGC	T	2966.45	PASS	AB=0.719;AC=23;AF=0.442;AN=52;BaseQRankSum=4.747;DP=402;FS=3.154;HRun=0;HaplotypeScore=186.2932;InbreedingCoeff=0.3637;MQ=58.66;MQ0=4;MQRankSum=-6.657;QD=16.03;ReadPosRankSum=3.122;VQSLOD=2.4478;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:3,0:7:2.04:0,2,6	0/0:3,0:2:2.84:0,3,14	0/0:10,0:7:2.34:0,2,59	./.	1/1:6,10:17:12.04:365,12,0	1/1:12,3:14:6.02:211,6,0	0/0:13,0:13:24.08:0,24,784	0/1:7,0:9:68.55:115,0,69	0/1:6,0:13:28.80:333,0,29	1/1:8,0:12:0.77:2,1,0	1/1:10,6:16:24.08:609,24,0	1/1:6,6:12:24.08:587,24,0	1/1:15,2:16:12.04:345,12,0	0/1:8,0:13:15.74:107,0,16	0/1:5,0:10:19.56:107,0,20	0/0:32,0:32:75.26:0,75,4261	0/0:12,0:12:3:0,3,26	0/0:21,0:20:51.01:0,51,1109	0/0:18,0:18:6.02:0,6,99	0/0:29,0:27:18.06:0,18,440	1/1:7,2:10:3.01:60,3,0	1/1:8,3:12:3.48:61,3,0	1/1:12,3:15:9.03:180,9,0	0/1:9,0:13:50.90:57,0,51	0/0:24,0:24:57.19:0,57,1518	0/0:12,0:12:18.05:0,18,465	0/0:6,0:6:6.02:0,6,161
chr10	94787545	.	CGCGCGT	C	2577	PASS	AB=1.000;AC=35;AF=0.673;AN=52;BaseQRankSum=9.339;DP=383;FS=4.123;HRun=0;HaplotypeScore=138.8782;InbreedingCoeff=0.3993;MQ=57.44;MQ0=5;MQRankSum=-7.618;QD=9.99;ReadPosRankSum=3.256;VQSLOD=2.6624;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:7:2.04:0,2,6	0/0:3,0:2:2.97:0,3,20	0/0:9,0:6:2.04:0,2,21	./.	1/1:16,0:16:12.04:177,12,0	1/1:12,0:11:6.02:83,6,0	0/0:11,0:11:6.83:0,7,100	1/1:8,0:8:15.03:188,15,0	1/1:13,0:13:29.83:470,30,0	1/1:8,3:11:0.20:1,0,0	1/1:16,0:16:23.66:261,24,0	1/1:12,0:12:24.03:279,24,0	1/1:17,0:16:12.04:147,12,0	1/1:11,2:13:15.01:183,15,0	1/1:9,1:10:12.03:191,12,0	0/0:33,0:33:78.18:0,78,2121	1/1:12,0:12:3.01:42,3,0	0/1:21,0:20:42.06:42,0,151	1/1:16,0:16:5.99:50,6,0	0/0:29,0:26:0.90:0,1,96	1/1:9,0:9:3.01:57,3,0	1/1:12,0:12:3.48:55,3,0	1/1:14,0:14:9.03:144,9,0	1/1:10,3:12:18:293,18,0	0/1:23,0:23:58.38:58,0,124	0/1:10,0:10:5.57:6,0,115	0/0:4,0:4:0.46:0,0,1
chr10	94787547	.	CGCGT	C	2239.17	PASS	AB=1.000;AC=39;AF=0.750;AN=52;BaseQRankSum=8.526;DP=374;FS=2.905;HRun=0;HaplotypeScore=134.5274;InbreedingCoeff=0.2858;MQ=52.20;MQ0=5;MQRankSum=-5.680;QD=7.62;ReadPosRankSum=5.051;VQSLOD=2.1011;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:9,0:9:2.04:0,2,6	0/0:3,0:2:2.97:0,3,20	0/0:6,0:3:2.12:0,2,20	./.	1/1:14,0:14:12:110,12,0	1/1:9,0:8:6:54,6,0	0/1:12,0:12:62.11:74,0,62	1/1:5,3:8:15.04:223,15,0	1/1:13,0:13:29.80:315,30,0	1/1:10,0:10:0.36:1,0,0	1/1:17,0:17:18.26:147,18,0	1/1:14,0:14:23.69:171,24,0	1/1:18,0:17:11.89:91,12,0	1/1:12,1:13:11.07:158,11,0	1/1:10,1:11:10.93:164,11,0	0/0:31,0:31:78.11:0,78,1621	1/1:7,6:13:3.01:56,3,0	0/1:23,0:22:99:137,0,107	1/1:14,0:14:6.01:57,6,0	0/1:28,0:25:0.67:1,0,98	1/1:4,0:4:3.01:32,3,0	1/1:12,0:12:3.01:32,3,0	1/1:13,0:13:8.92:81,9,0	1/1:12,2:13:10.13:209,10,0	0/1:21,0:21:78.01:221,0,78	0/1:9,0:9:4.11:4,0,91	1/1:4,0:4:5.99:49,6,0
chr10	94787560	.	GCGCGCACA	G	3167.51	PASS	AB=1.000;AC=28;AF=0.560;AN=50;BaseQRankSum=2.816;DP=437;FS=6.590;HRun=0;HaplotypeScore=173.2042;InbreedingCoeff=0.2383;MQ=43.64;MQ0=11;MQRankSum=-1.976;QD=10.49;ReadPosRankSum=3.006;VQSLOD=1.9368;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:9,0:9:6.02:0,6,98	./.	./.	0/0:12,0:12:5.04:0,5,68	1/1:22,0:22:9.26:50,9,0	1/1:17,0:16:5.38:39,5,0	1/1:16,0:15:29.99:367,30,0	0/1:12,0:12:11.88:12,0,83	0/1:13,0:13:99:148,0,129	0/0:12,0:12:2.06:0,2,48	0/1:20,0:20:94:94,0,159	0/1:21,0:21:65.97:66,0,251	0/1:21,0:20:40.10:40,0,313	0/0:14,0:14:5.35:0,5,31	0/1:16,0:16:32.75:34,0,33	0/0:27,0:27:75.20:0,75,2320	0/0:9,0:9:10.57:0,11,143	1/1:4,15:19:51.04:796,51,0	1/1:5,12:17:6.02:175,6,0	1/1:11,0:24:15.05:309,15,0	1/1:15,0:15:2.51:7,3,0	0/0:13,0:13:0.21:0,0,105	1/1:26,0:26:6.26:23,6,0	0/0:19,0:17:16.69:0,17,104	1/1:6,17:24:3.46:926,3,0	1/1:1,5:6:2.46:86,2,0	1/1:6,0:5:9.03:159,9,0
chr10	94787600	.	A	ATCC	316.52	PASS	AB=0.787;AC=19;AF=0.339;AN=56;BaseQRankSum=5.757;DP=553;FS=12.796;HRun=0;HaplotypeScore=175.7347;InbreedingCoeff=-0.0967;MQ=60.27;MQ0=6;MQRankSum=-1.863;QD=1.07;ReadPosRankSum=-4.341;VQSLOD=0.3023;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:33.11:0,33,590	1/1:2,0:8:0.45:2,0,0	0/0:18,0:11:29.84:0,30,504	0/0:13,0:10:27.97:0,28,443	0/0:15,0:16:10.02:0,10,55	0/1:6,0:17:15.62:31,0,16	1/1:5,0:22:7.80:45,8,0	0/0:31,0:31:27.29:0,27,346	0/1:5,0:17:22.11:22,0,22	0/0:15,0:15:6.06:0,6,119	0/1:10,0:10:4.79:23,0,5	0/1:22,0:25:54.38:54,0,133	0/1:22,0:24:12.75:13,0,124	0/1:20,0:22:49.52:50,0,142	0/1:5,1:21:0.76:1,0,51	0/1:3,0:17:9.73:79,0,10	0/0:34,0:34:90.29:0,90,1590	0/0:19,0:19:0.77:0,1,145	0/0:26,0:25:67.65:0,68,422	0/1:12,0:11:60.95:61,0,77	0/0:30,0:28:25.21:0,25,252	1/1:7,0:21:1.70:29,2,0	0/1:20,0:21:2.93:3,0,119	0/1:10,0:28:10.76:11,0,28	0/1:9,0:22:29.04:38,0,29	0/0:22,0:21:45.44:0,45,360	0/1:9,0:8:4.69:5,0,61	0/0:4,0:3:5.74:0,6,30
chr10	94788399	.	T	TTGCGTGCGTGCGTGCGTGC	8149.66	PASS	AB=0.568;AC=31;AF=0.554;AN=56;BaseQRankSum=14.490;DP=797;FS=10.223;HRun=0;HaplotypeScore=401.1674;InbreedingCoeff=0.9003;MQ=61.28;MQ0=0;MQRankSum=-15.521;QD=17.83;ReadPosRankSum=-0.266;VQSLOD=1.9159;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,126,5425	1/1:5,0:20:33.89:306,34,0	0/0:27,0:27:42.66:0,43,1741	0/0:15,0:14:35.98:0,36,1201	1/1:4,0:16:9:78,9,0	0/0:22,0:22:60.21:0,60,2688	0/0:32,0:32:27.64:0,28,2757	1/1:18,0:41:40.55:543,41,0	1/1:4,0:27:19.39:292,19,0	1/1:17,12:38:59.81:3290,60,0	1/1:10,4:19:6.02:410,6,0	0/0:46,0:46:99:0,108,4554	0/0:20,0:20:60.19:0,60,2758	0/0:29,0:29:66.23:0,66,2925	1/1:6,0:34:38.99:339,39,0	1/1:5,0:27:15.52:291,16,0	0/0:19,0:19:48.15:0,48,2236	1/1:4,0:16:12.01:107,12,0	1/1:12,0:35:56.05:604,56,0	0/1:6,0:25:12.12:90,0,12	1/1:22,0:46:18.88:160,19,0	0/0:25,0:25:66.21:0,66,2938	0/0:15,0:15:36.12:0,36,1625	0/0:44,0:44:99:0,117,4863	1/1:5,0:33:32.93:278,33,0	1/1:6,0:29:59.86:622,60,0	1/1:2,0:41:66:578,66,0	1/1:0,0:10:18.01:161,18,0
chr10	94789358	.	TC	T	6083.91	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=10.566;DP=508;FS=9.909;HRun=2;HaplotypeScore=91.7960;InbreedingCoeff=0.7721;MQ=67.79;MQ0=8;MQRankSum=-1.940;QD=15.21;ReadPosRankSum=4.219;VQSLOD=3.9152;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.03:0,66,913	1/1:10,0:10:28.10:142,28,0	0/0:25,0:15:38.14:0,38,535	0/0:26,0:20:51.09:0,51,709	1/1:14,0:14:33.53:161,34,0	1/1:4,20:24:66.14:708,66,0	1/1:7,10:16:24.06:262,24,0	0/1:14,0:14:29.80:119,0,30	1/1:19,0:19:10.76:188,11,0	1/1:22,0:22:56.32:264,56,0	1/1:20,0:20:50.06:243,50,0	1/1:2,12:14:39.09:418,39,0	1/1:4,10:14:39.02:392,39,0	1/1:2,14:16:45.12:492,45,0	0/1:9,0:9:0.65:70,0,1	1/1:14,0:14:12.28:110,12,0	0/0:32,0:32:87.19:0,87,1174	1/1:20,0:20:22.10:159,22,0	1/1:15,0:14:10.48:145,10,0	1/1:20,0:20:29.63:200,30,0	1/1:24,1:25:27.34:267,27,0	1/1:0,9:9:27.07:295,27,0	1/1:3,17:19:48:494,48,0	1/1:3,8:11:21.03:217,21,0	1/1:24,0:24:35.16:255,35,0	1/1:25,0:25:35.97:252,36,0	1/1:13,0:13:11.40:125,11,0	1/1:11,0:11:23.56:106,24,0
chr10	94789360	.	CG	C	11370.44	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=4.979;DP=492;FS=20.288;HRun=5;HaplotypeScore=73.1360;InbreedingCoeff=0.9966;MQ=64.85;MQ0=8;MQRankSum=-0.473;QD=29.01;ReadPosRankSum=1.828;VQSLOD=3.1605;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.21:0,63,857	1/1:1,10:11:30.04:325,30,0	0/0:25,0:15:35.95:0,36,460	0/0:22,0:16:48.16:0,48,637	1/1:0,13:13:36.10:408,36,0	1/1:24,0:24:66.14:708,66,0	1/1:17,0:16:24.06:262,24,0	1/1:3,10:13:30.08:339,30,0	1/1:2,17:19:48.14:543,48,0	1/1:0,22:22:63.18:713,63,0	1/1:1,19:20:54.15:610,54,0	1/1:14,0:14:39.09:418,39,0	1/1:13,0:13:39.02:392,39,0	1/1:17,0:17:45.12:492,45,0	1/1:0,8:8:24.07:271,24,0	1/1:2,12:14:33.09:374,33,0	0/0:31,0:31:78.15:0,78,1005	1/1:0,19:19:51.15:578,51,0	1/1:1,12:12:36.10:405,36,0	1/1:1,18:19:51.15:578,51,0	1/1:3,22:25:69.19:775,69,0	1/1:9,0:9:27.07:295,27,0	1/1:21,0:20:47.99:494,48,0	1/1:9,0:9:21.03:217,21,0	1/1:1,23:24:63.18:714,63,0	1/1:1,24:25:66.19:748,66,0	1/1:0,12:12:36.10:408,36,0	1/1:0,11:11:27.08:306,27,0
chr10	94789406	.	C	CTT	4974.95	PASS	AC=16;AF=0.308;AN=52;BaseQRankSum=4.544;DP=392;FS=10.587;HRun=0;HaplotypeScore=86.0739;InbreedingCoeff=0.9914;MQ=45.62;MQ0=7;MQRankSum=-8.251;QD=47.38;ReadPosRankSum=1.238;VQSLOD=5.7115;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:63.22:0,63,1023	0/0:11,0:11:33.11:0,33,516	./.	./.	0/0:13,0:12:27.09:0,27,440	1/1:0,17:17:45.15:913,45,0	1/1:1,18:17:18.06:365,18,0	0/0:18,0:18:30.06:0,30,457	0/0:15,0:15:45.15:0,45,720	0/0:19,0:19:51.17:0,51,812	0/0:21,0:21:54.18:0,54,878	1/1:1,12:13:36.09:690,36,0	1/1:0,9:8:24.08:486,24,0	1/1:1,17:18:51.18:1024,51,0	0/0:8,0:8:21.07:0,21,342	0/0:9,0:9:18.06:0,18,293	0/0:32,0:28:66.15:0,66,996	0/0:13,0:12:36.12:0,36,587	0/0:10,0:8:21.07:0,21,342	0/0:16,0:16:42.14:0,42,685	0/0:17,0:16:45.14:0,45,709	1/1:0,7:7:21.07:425,21,0	1/1:1,12:12:36.12:707,36,0	1/1:2,7:9:18.06:365,18,0	0/0:17,0:16:48.16:0,48,782	0/0:19,0:18:51.17:0,51,829	0/0:7,0:6:18.06:0,18,293	0/0:11,0:10:27.09:0,27,440
chr10	94789437	.	GAAAAAGAAAAAAAAAA	G	1303.07	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=0.314;DP=449;FS=23.786;HRun=0;HaplotypeScore=188.7381;InbreedingCoeff=0.7791;MQ=42.60;MQ0=15;MQRankSum=-2.654;QD=48.26;ReadPosRankSum=2.498;VQSLOD=1.8721;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:26:66.14:0,66,3238	0/0:7,0:7:5.98:0,6,56	./.	0/0:22,0:3:0.88:0,1,2	0/0:17,0:16:30.10:0,30,1351	0/0:18,0:18:33.04:0,33,1960	0/0:15,0:14:21.07:0,21,1217	0/0:32,0:29:58.29:0,58,1856	0/0:20,0:19:33.07:0,33,1804	1/1:6,4:10:21.03:647,21,0	1/1:11,6:17:29.88:775,30,0	0/0:10,0:10:21.03:0,21,1214	0/0:8,0:6:17.94:0,18,495	0/0:14,0:12:18.02:0,18,668	0/0:13,0:11:30.04:0,30,899	0/0:11,0:9:21.07:0,21,1108	0/0:36,0:32:45.10:0,45,1929	0/0:13,0:12:24.07:0,24,1199	0/0:14,0:14:27.09:0,27,1393	0/0:20,0:19:27.09:0,27,1343	0/0:7,0:6:8.97:0,9,276	0/0:7,0:7:6.02:0,6,230	0/0:10,0:9:9.02:0,9,416	0/0:16,0:16:39.09:0,39,2143	0/0:16,0:15:24.07:0,24,1222	0/0:21,0:18:36.96:0,37,2029	0/0:20,0:17:38.89:0,39,1962	0/0:10,0:8:12.02:0,12,279
chr10	94789443	.	GA	G	317.18	PASS	AB=0.919;AC=17;AF=0.315;AN=54;BaseQRankSum=-0.166;DP=470;FS=1.270;HRun=15;HaplotypeScore=86.5429;InbreedingCoeff=0.3521;MQ=42.04;MQ0=18;MQRankSum=-0.636;QD=1.42;ReadPosRankSum=1.418;VQSLOD=-0.6529;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:48.33:0,48,392	1/1:5,0:5:2.94:19,3,0	./.	0/1:28,2:5:0.28:0,0,0	0/0:16,0:14:12.20:0,12,117	0/0:24,1:25:41.60:0,42,338	0/0:11,0:11:17.84:0,18,146	0/1:31,8:35:52.33:124,0,52	0/0:18,0:16:21.59:0,22,166	1/1:8,0:8:9.02:25,9,0	1/1:14,0:14:10.13:31,10,0	0/0:10,0:10:3.18:0,3,117	0/0:10,0:9:2.90:0,3,44	0/0:12,0:9:13.46:0,13,99	0/0:14,0:11:11.19:0,11,84	0/1:11,1:11:14.84:15,0,36	1/1:15,20:32:28.25:178,28,0	0/0:15,0:14:19.51:0,20,125	0/1:19,1:19:34.41:34,0,117	0/0:17,0:16:21.54:0,22,172	0/0:7,0:6:7.09:0,7,42	0/0:5,0:5:6.83:0,7,41	0/1:6,1:7:7.27:7,0,57	0/0:15,0:16:33.27:0,33,236	0/1:21,1:21:1.21:1,0,128	0/0:22,0:17:26.11:0,26,139	0/1:19,1:16:5.14:5,0,97	1/1:9,1:8:5.86:36,6,0
chr10	94789466	.	G	GA	2876.10	PASS	AB=0.821;AC=29;AF=0.518;AN=56;BaseQRankSum=-0.353;DP=484;FS=7.716;HRun=12;HaplotypeScore=74.0247;InbreedingCoeff=0.4961;MQ=53.31;MQ0=15;MQRankSum=0.501;QD=10.54;ReadPosRankSum=0.445;VQSLOD=2.7903;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,14:29:49.54:433,50,0	1/1:1,3:4:9.49:88,9,0	0/1:25,0:7:19.78:20,0,55	0/1:27,0:8:4.78:18,0,5	1/1:9,10:18:26.39:297,26,0	1/1:7,16:23:38.90:364,39,0	0/1:7,5:12:3.80:128,0,4	0/0:38,1:36:6.06:0,6,319	0/1:10,8:16:16.66:178,0,17	0/0:15,0:15:32.11:0,32,222	0/0:12,0:12:29.67:0,30,203	1/1:8,3:11:20.16:176,20,0	1/1:3,4:7:14.89:124,15,0	1/1:9,1:7:9.01:86,9,0	0/1:9,1:7:12.78:49,0,13	0/1:7,4:10:38.43:148,0,38	0/0:32,0:31:43.69:0,44,304	1/1:8,7:16:38.64:338,39,0	0/0:30,0:28:40.10:0,40,302	0/0:15,0:14:25.99:0,26,176	0/0:9,0:8:11.90:0,12,87	1/1:1,5:6:14.98:136,15,0	1/1:5,3:8:11.97:107,12,0	1/1:13,4:18:29.68:221,30,0	0/1:10,7:17:43.84:170,0,44	0/0:25,0:20:43.50:0,43,311	0/0:23,0:17:40.81:0,41,290	0/0:8,0:7:12.20:0,12,74
chr10	94789667	.	G	GGAGCAGTACGTACCCT	81692.87	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-3.391;DP=693;FS=11.356;HRun=0;HaplotypeScore=261.8707;InbreedingCoeff=0.9915;MQ=69.06;MQ0=0;MQRankSum=-15.996;QD=145.10;ReadPosRankSum=0.773;VQSLOD=3.6233;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,123,5291	1/1:9,3:13:33.11:2110,33,0	0/0:23,0:23:63.22:0,63,2466	0/0:24,0:24:66.16:0,66,2271	1/1:8,6:15:18.53:1204,19,0	1/1:10,10:22:39.13:2819,39,0	1/1:24,9:33:69.24:4455,69,0	1/1:23,0:23:63.20:3347,63,0	1/1:16,15:34:84.29:5988,84,0	1/1:17,15:32:96.33:6322,96,0	1/1:9,7:17:23.80:1755,24,0	1/1:17,16:39:93.32:6584,93,0	1/1:7,10:21:48.16:2963,48,0	1/1:13,14:30:72.25:4765,72,0	1/1:14,9:25:60.21:4094,60,0	1/1:13,13:27:78.27:5250,78,0	0/0:37,0:37:99:0,101,4408	1/1:8,4:15:24.08:1831,24,0	1/1:23,4:28:78.26:3393,78,0	1/1:9,8:21:39.13:2641,39,0	1/1:25,6:38:56.91:4107,57,0	1/1:9,3:14:27.09:2004,27,0	1/1:12,3:16:32.83:2310,33,0	1/1:9,10:26:27.09:2076,27,0	1/1:8,7:15:30.10:2338,30,0	1/1:5,15:22:66.23:4857,66,0	1/1:13,7:23:54.14:3669,54,0	1/1:5,1:8:15.05:810,15,0
chr10	94789898	.	CT	C	2845.31	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=7.691;DP=626;FS=0.360;HRun=13;HaplotypeScore=75.3777;InbreedingCoeff=0.9126;MQ=67.39;MQ0=3;MQRankSum=0.763;QD=15.05;ReadPosRankSum=1.862;VQSLOD=4.5590;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:41:52.53:0,53,268	1/1:3,8:11:23.85:175,24,0	0/0:22,0:9:5.03:0,5,32	0/0:19,0:12:5.20:0,5,29	1/1:5,15:21:17.59:283,18,0	0/0:22,0:21:55.62:0,56,521	0/0:20,1:21:27.24:0,27,401	0/0:28,0:30:68.91:0,69,639	1/1:1,13:14:35.79:263,36,0	1/1:7,23:30:65.57:479,66,0	1/1:4,11:15:3.61:190,4,0	0/0:21,0:21:17.67:0,18,319	0/0:17,0:17:27.01:0,27,248	0/0:17,0:17:33.05:0,33,321	1/1:6,14:20:38.74:284,39,0	1/1:4,10:14:29.79:219,30,0	0/0:34,1:36:62.03:0,62,736	1/1:3,25:28:68.59:503,69,0	0/0:26,0:27:44.40:0,44,384	0/0:21,1:25:29.20:0,29,432	0/0:5,0:5:12.02:0,12,117	0/0:22,0:22:47.94:0,48,452	0/0:19,1:20:23.16:0,23,387	0/0:15,0:15:36.06:0,36,350	1/1:4,32:36:89.47:657,89,0	0/0:17,2:19:15.79:0,16,455	0/0:33,4:36:21.39:0,21,685	0/0:16,2:18:7.06:0,7,259
chr10	94790289	.	AG	A	5190.20	PASS	AB=0.975;AC=45;AF=0.804;AN=56;BaseQRankSum=3.771;DP=538;FS=14.533;HRun=11;HaplotypeScore=69.1348;InbreedingCoeff=0.5710;MQ=77.82;MQ0=0;MQRankSum=-3.064;QD=11.38;ReadPosRankSum=5.486;VQSLOD=2.5375;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:19:34.99:275,35,0	1/1:2,4:6:11.97:98,12,0	0/0:20,0:22:34.09:0,34,347	0/0:21,0:23:3.70:0,4,179	1/1:7,18:25:56.83:457,57,0	0/1:17,0:17:24.90:40,0,25	0/1:18,0:18:20.03:20,0,107	1/1:12,15:28:46.09:350,46,0	1/1:3,19:22:47.89:389,48,0	0/1:23,2:25:4.22:4,0,344	0/0:13,0:13:2.37:0,2,224	1/1:16,0:16:24.04:120,24,0	1/1:13,0:13:8.46:41,8,0	1/1:16,0:16:29.38:142,29,0	1/1:4,12:16:32.95:271,33,0	1/1:1,11:13:32:252,32,0	0/0:22,1:23:20.49:0,20,420	1/1:3,22:25:65.91:542,66,0	1/1:8,8:16:26.93:221,27,0	1/1:3,15:18:32.81:257,33,0	1/1:9,20:29:47.80:381,48,0	1/1:12,0:12:15.04:65,15,0	1/1:23,0:23:7.43:94,7,0	1/1:17,0:17:17:82,17,0	1/1:5,23:28:22.27:387,22,0	1/1:8,7:16:25.02:183,25,0	1/1:5,16:21:38.95:320,39,0	1/1:1,16:17:23.96:197,24,0
chr10	94790299	.	GGA	G	636.69	PASS	AB=0.971;AC=14;AF=0.250;AN=56;BaseQRankSum=5.524;DP=518;FS=0.000;HRun=0;HaplotypeScore=91.6400;InbreedingCoeff=0.7555;MQ=80.52;MQ0=0;MQRankSum=-1.038;QD=5.35;ReadPosRankSum=0.346;VQSLOD=2.7788;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:51.99:0,52,369	0/0:7,0:7:13.26:0,13,101	0/0:23,0:22:37.54:0,38,692	0/0:24,0:24:37.55:0,38,496	0/0:23,0:23:60.62:0,61,377	0/1:15,1:16:23.81:158,0,24	0/1:18,0:18:52.05:110,0,52	0/0:30,0:30:50.07:0,50,534	0/0:20,0:20:30:0,30,246	0/0:27,0:27:74.92:0,75,950	0/0:10,0:10:23.76:0,24,431	1/1:12,1:13:20.19:93,20,0	1/1:10,0:10:6.41:20,6,0	1/1:15,1:16:30.64:157,31,0	0/0:13,0:13:27.59:0,28,175	0/0:16,0:16:38.51:0,39,259	0/0:20,0:20:57.05:0,57,894	0/0:24,0:24:69.83:0,70,419	0/0:14,0:14:36.13:0,36,238	0/0:18,0:18:32.51:0,33,323	0/0:25,0:25:61.66:0,62,394	1/1:12,1:13:22.22:124,22,0	1/1:18,2:20:5.69:115,6,0	1/1:13,0:13:13.32:40,13,0	0/0:28,0:27:64.35:0,64,442	0/0:13,0:13:20.41:0,20,209	0/0:17,0:17:37.49:0,37,206	0/0:20,0:20:35.23:0,35,260
chr10	94790878	.	GAGAGAGAGCA	G	1615.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.783;DP=651;FS=15.116;HRun=0;HaplotypeScore=204.7086;InbreedingCoeff=0.9953;MQ=75.42;MQ0=1;MQRankSum=-6.280;QD=42.52;ReadPosRankSum=1.447;VQSLOD=2.2020;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,25:38:63.22:1710,63,0	0/0:10,0:10:24.08:0,24,1021	0/0:23,0:21:47.60:0,48,1700	0/0:30,0:26:40.96:0,41,1610	0/0:23,0:23:57.20:0,57,2678	0/0:17,0:17:36.12:0,36,1721	0/0:15,0:15:42.13:0,42,1907	0/0:33,0:33:72.21:0,72,3022	0/0:19,0:19:48.16:0,48,2291	0/0:29,0:29:69.24:0,69,3355	0/0:20,0:20:54.12:0,54,2477	0/0:15,0:15:36.11:0,36,1479	0/0:19,0:19:48.15:0,48,2106	0/0:17,0:17:45.15:0,45,2305	0/0:23,0:23:57.67:0,58,2794	0/0:10,0:10:24.08:0,24,891	0/0:25,0:25:60.21:0,60,3076	0/0:19,0:19:45.15:0,45,2222	0/0:25,0:25:45.15:0,45,2065	0/0:25,0:25:63.17:0,63,3027	0/0:38,0:38:99:0,99,4797	0/0:25,0:25:57.11:0,57,2616	0/0:13,0:13:33.11:0,33,1690	0/0:31,0:31:72.25:0,72,3508	0/0:28,0:28:66.20:0,66,2968	0/0:22,0:22:63.22:0,63,3127	0/0:27,0:27:59.82:0,60,2645	0/0:30,0:30:69.19:0,69,2868
chr10	94790962	.	C	CT	21436.50	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=0.106;DP=586;FS=0.000;HRun=0;HaplotypeScore=76.8506;InbreedingCoeff=0.9955;MQ=91.59;MQ0=0;MQRankSum=-8.164;QD=41.87;ReadPosRankSum=3.602;VQSLOD=5.4511;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,47:48:99:1908,120,0	1/1:0,9:9:27.09:431,27,0	0/0:21,0:21:57.08:0,57,766	0/0:28,0:28:78.23:0,78,1038	1/1:0,13:13:33.11:527,33,0	1/1:1,16:17:36.12:575,36,0	1/1:0,26:26:66.23:1055,66,0	1/1:2,35:37:99:1540,105,0	1/1:1,16:17:42.14:667,42,0	1/1:0,16:16:48.15:744,48,0	1/1:0,13:13:27.09:427,27,0	1/1:0,13:13:36.12:575,36,0	1/1:0,19:19:57.19:911,57,0	1/1:0,13:13:36.12:575,36,0	1/1:0,25:25:57.01:911,57,0	1/1:0,13:13:39.13:623,39,0	0/0:25,0:25:72.22:0,72,986	1/1:0,24:24:66.22:1046,66,0	1/1:0,26:26:78.19:1172,78,0	1/1:0,14:14:39.13:623,39,0	1/1:0,41:41:99:1677,105,0	1/1:0,15:15:39.13:623,39,0	1/1:1,11:12:24.77:516,25,0	1/1:0,22:22:57.19:911,57,0	1/1:0,21:21:57.19:910,57,0	1/1:0,24:24:72.20:1101,72,0	1/1:0,27:27:69.24:1102,69,0	1/1:0,7:7:18.06:288,18,0
chr10	94793497	.	GA	G	4108.64	PASS	AB=0.750;AC=46;AF=0.852;AN=54;BaseQRankSum=1.247;DP=363;FS=4.265;HRun=9;HaplotypeScore=63.1172;InbreedingCoeff=0.6896;MQ=37.51;MQ0=36;MQRankSum=-0.284;QD=13.83;ReadPosRankSum=1.316;VQSLOD=3.6705;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:38:46.85:0,47,497	0/1:3,1:3:0:0,0,0	./.	0/0:3,0:1:0:0,0,0	1/1:5,12:17:17.99:164,18,0	1/1:7,19:24:48.02:439,48,0	1/1:4,16:17:45.02:411,45,0	1/1:6,7:10:20.84:192,21,0	0/1:4,3:6:0.52:70,0,1	1/1:4,13:16:36.01:329,36,0	1/1:3,9:11:24.01:218,24,0	1/1:1,5:6:15.01:137,15,0	1/1:6,6:9:18.01:165,18,0	1/1:2,6:8:15.01:137,15,0	1/1:6,9:15:23.97:219,24,0	1/1:6,6:12:16.40:161,16,0	0/0:19,0:17:21.45:0,21,217	1/1:7,6:9:17.96:162,18,0	1/1:4,6:8:11.99:110,12,0	1/1:3,7:9:15.01:137,15,0	1/1:4,3:7:6:55,6,0	1/1:8,7:15:11.99:110,12,0	1/1:4,8:11:24.01:216,24,0	1/1:4,6:8:11.74:109,12,0	1/1:9,5:14:14.98:131,15,0	1/1:7,7:11:18:165,18,0	1/1:5,3:6:9:82,9,0	1/1:10,3:10:23.86:191,24,0
chr10	94793506	.	AG	A	2163.69	PASS	AB=0.974;AC=36;AF=0.692;AN=52;BaseQRankSum=9.915;DP=424;FS=157.004;HRun=1;HaplotypeScore=75.7653;InbreedingCoeff=-0.2657;MQ=36.42;MQ0=33;MQRankSum=0.582;QD=5.79;ReadPosRankSum=4.172;VQSLOD=0.5384;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:38:27.28:0,27,564	0/1:5,0:4:17.78:18,0,24	./.	./.	0/1:18,1:19:44.14:98,0,44	0/1:26,0:24:15.98:119,0,16	1/1:23,0:21:28.59:165,29,0	0/1:20,1:18:61.52:108,0,62	0/1:11,0:11:5.80:85,0,6	0/1:23,1:21:35.07:115,0,35	0/1:13,0:12:6.69:75,0,7	1/1:11,1:12:18.75:84,19,0	1/1:17,0:14:2.26:157,2,0	1/1:13,0:13:30.63:192,31,0	1/1:14,0:14:34.17:155,34,0	1/1:11,0:11:24.85:123,25,0	0/1:21,0:19:43.78:44,0,188	1/1:16,0:10:0.89:62,1,0	0/1:12,0:12:39.22:49,0,39	0/1:13,0:12:29.81:33,0,30	1/1:3,0:3:1.77:5,2,0	1/1:12,1:12:22.02:119,22,0	0/1:14,0:12:22.50:48,0,22	0/1:10,1:9:2.33:38,0,2	1/1:15,0:14:18.92:89,19,0	0/1:16,0:13:36.46:36,0,49	0/1:11,1:10:13.82:48,0,14	1/1:12,6:16:30.50:252,30,0
chr10	94795051	.	GGTGTGT	G	742.40	PASS	AB=0.806;AC=16;AF=0.333;AN=48;BaseQRankSum=3.808;DP=519;FS=3.700;HRun=0;HaplotypeScore=109.4522;InbreedingCoeff=0.6437;MQ=69.07;MQ0=14;MQRankSum=-4.181;QD=5.34;ReadPosRankSum=0.169;VQSLOD=1.8065;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:24.03:0,24,454	./.	./.	./.	0/0:7,0:7:9.03:0,9,202	1/1:9,4:15:6.90:104,7,0	1/1:21,12:33:12.47:243,12,0	0/0:24,0:24:6.02:0,6,152	0/1:9,1:12:52.28:52,0,52	0/0:11,0:11:6.01:0,6,68	1/1:7,0:8:0.88:2,1,0	1/1:12,4:17:8.99:122,9,0	1/1:11,4:15:12.04:240,12,0	1/1:13,2:15:6.02:121,6,0	0/0:13,0:19:8.58:0,9,100	0/0:9,0:13:12.02:0,12,149	0/0:29,0:29:48.62:0,49,1110	0/0:24,0:31:42.39:0,42,589	0/0:15,0:15:15.05:0,15,291	0/0:14,0:13:12.04:0,12,328	0/0:36,0:43:21.06:0,21,546	0/1:10,3:13:0:0,0,0	1/1:11,0:10:2.80:13,3,0	./.	0/0:7,0:11:12.03:0,12,196	0/0:17,0:20:21.07:0,21,529	0/0:10,0:10:12.04:0,12,266	0/0:13,0:13:6.02:0,6,156
chr10	94796131	.	GC	G	7364.50	PASS	AB=0.938;AC=45;AF=0.804;AN=56;BaseQRankSum=4.636;DP=547;FS=12.327;HRun=10;HaplotypeScore=106.2592;InbreedingCoeff=0.8731;MQ=67.43;MQ0=0;MQRankSum=-0.899;QD=16.11;ReadPosRankSum=2.198;VQSLOD=4.0697;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:19:21.28:0,21,108	1/1:1,0:10:19.07:60,19,0	0/1:14,1:14:10.26:10,0,166	0/0:16,0:16:11.39:0,11,51	1/1:2,0:17:26.44:78,26,0	1/1:4,20:24:59.96:521,60,0	1/1:6,32:38:99:877,102,0	1/1:9,23:32:68.68:588,69,0	1/1:2,0:17:26.48:78,26,0	0/0:13,0:13:21.06:0,21,233	0/0:15,0:15:41.98:0,42,422	1/1:1,24:25:71.96:625,72,0	1/1:4,10:14:32.95:284,33,0	1/1:1,21:22:56.97:495,57,0	1/1:3,0:22:36.64:108,37,0	1/1:3,0:21:34.60:102,35,0	0/0:23,1:27:45.80:0,46,689	1/1:0,0:22:42.78:126,43,0	1/1:3,10:13:29.90:252,30,0	1/1:4,18:22:50.98:442,51,0	1/1:2,25:27:53.96:469,54,0	1/1:3,20:23:53.96:469,54,0	1/1:1,12:13:35.99:312,36,0	1/1:1,16:17:44.98:391,45,0	1/1:1,0:14:24.44:72,24,0	1/1:4,24:28:74.96:648,75,0	1/1:3,11:14:32.97:286,33,0	1/1:5,2:7:8.96:73,9,0
chr10	94797333	.	AACACACACACACACAC	A	1102.05	PASS	AB=0.848;AC=17;AF=0.354;AN=48;BaseQRankSum=4.822;DP=382;FS=1.571;HRun=0;HaplotypeScore=143.4783;InbreedingCoeff=0.2840;MQ=66.41;MQ0=10;MQRankSum=-4.391;QD=7.30;ReadPosRankSum=0.281;VQSLOD=2.7957;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:9.03:0,9,272	0/0:7,0:7:9:0,9,230	./.	./.	0/0:11,0:16:12.04:0,12,566	1/1:9,0:9:5.98:80,6,0	0/1:17,3:21:10.94:362,0,11	0/0:12,0:12:6.02:0,6,239	0/0:11,0:9:6.02:0,6,240	0/1:14,1:15:99:116,0,121	1/1:3,0:7:3.01:72,3,0	./.	./.	1/1:13,3:16:6.02:262,6,0	0/0:16,0:18:18.06:0,18,1178	0/0:9,0:19:21.07:0,21,982	0/0:22,0:21:52.73:0,53,3188	0/0:10,0:16:18.05:0,18,658	0/0:12,0:12:6.02:0,6,155	0/1:7,0:9:19.82:20,0,70	0/0:18,0:17:26.35:0,26,381	1/1:14,0:14:5.95:42,6,0	1/1:3,9:11:3.01:131,3,0	1/1:19,5:23:3.01:131,3,0	0/0:8,0:8:12.04:0,12,294	0/1:12,0:14:16.59:17,0,119	0/1:7,0:10:22.63:23,0,63	0/0:1,0:3:3.01:0,3,89
chr10	94797537	.	C	CTG	2360.69	PASS	AB=0.939;AC=41;AF=0.788;AN=52;BaseQRankSum=6.525;DP=531;FS=3.416;HRun=0;HaplotypeScore=191.8469;InbreedingCoeff=0.6467;MQ=57.14;MQ0=15;MQRankSum=-5.440;QD=5.96;ReadPosRankSum=0.624;VQSLOD=3.1951;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:9,0:12:8.69:74,9,0	0/0:39,0:18:19.38:0,19,255	0/0:38,0:18:30.76:0,31,357	1/1:17,0:15:2.02:6,2,0	1/1:21,0:21:26.60:194,27,0	1/1:15,0:14:5.89:37,6,0	1/1:34,0:27:13.06:162,13,0	1/1:11,0:10:17.75:120,18,0	1/1:10,15:25:41.98:673,42,0	0/0:4,8:12:2.75:0,3,36	0/1:14,0:18:0.46:19,0,0	1/1:11,0:11:11.99:113,12,0	1/1:10,0:9:14.73:93,15,0	1/1:17,0:24:11.80:75,12,0	1/1:22,0:20:20.80:153,21,0	0/0:28,0:28:60.19:0,60,732	1/1:23,0:23:26.83:209,27,0	1/1:18,0:15:15.60:121,16,0	1/1:15,0:14:11.87:83,12,0	./.	1/1:13,0:12:2.94:18,3,0	1/1:21,0:20:5.88:36,6,0	0/1:12,0:11:0:0,0,0	0/1:27,0:25:0:0,0,0	1/1:18,0:17:9.37:61,9,0	1/1:21,0:21:29.47:204,29,0	1/1:8,0:6:8.86:57,9,0
chr10	94797565	.	G	GAC	385.29	PASS	AB=0.959;AC=18;AF=0.321;AN=56;BaseQRankSum=2.390;DP=533;FS=24.347;HRun=0;HaplotypeScore=177.0358;InbreedingCoeff=-0.0149;MQ=34.69;MQ0=31;MQRankSum=-2.523;QD=1.44;ReadPosRankSum=-0.704;VQSLOD=1.0981;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:0.74:0,1,2	0/1:12,2:14:7.24:27,0,7	0/0:20,0:1:2.80:0,3,13	0/0:28,0:8:8.71:0,9,128	1/1:18,3:18:1.93:6,2,0	0/0:19,0:18:10.33:0,10,59	0/1:20,0:18:6.35:6,0,25	0/1:43,0:38:99:201,0,175	0/1:13,1:13:23.36:23,0,40	0/0:25,0:24:54.36:0,54,390	0/0:16,0:15:3:0,3,25	1/1:15,0:15:0.28:4,0,0	0/0:16,0:16:9.29:0,9,51	0/0:12,0:10:2.73:0,3,17	0/1:21,2:23:13.96:34,0,14	0/1:15,3:16:2.18:2,0,33	0/0:28,0:25:59.61:0,60,455	1/1:12,1:9:3.89:111,4,0	0/1:27,0:24:56.44:56,0,132	0/0:18,0:14:6.73:0,7,37	1/1:16,0:14:0.60:1,1,0	0/0:19,0:17:6.96:0,7,46	0/0:18,0:17:1.75:0,2,16	0/1:13,0:10:0.01:0,0,0	0/0:28,2:28:2.54:0,3,8	0/1:15,0:13:12.75:13,0,78	0/1:16,0:16:29.93:30,0,40	0/0:8,0:5:14.62:0,15,87
chr10	94797610	.	AGGGAGG	A	8272.98	PASS	AB=0.817;AC=47;AF=0.839;AN=56;BaseQRankSum=-3.051;DP=554;FS=7.412;HRun=0;HaplotypeScore=171.6276;InbreedingCoeff=0.3105;MQ=68.02;MQ0=17;MQRankSum=-0.533;QD=17.42;ReadPosRankSum=1.356;VQSLOD=3.7460;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:12.89:219,13,0	1/1:12,0:12:1.90:237,2,0	0/1:42,0:23:38.62:39,0,268	0/0:58,0:26:3.54:0,4,432	1/1:23,0:22:23.71:343,24,0	1/1:12,0:11:17.53:255,18,0	1/1:20,0:20:0.83:115,1,0	1/1:3,24:27:67.48:1031,67,0	1/1:16,0:16:19.13:378,19,0	0/1:13,0:13:0.47:438,0,0	1/1:11,0:11:12.04:200,12,0	1/1:18,0:21:32.84:503,33,0	1/1:18,0:18:11.48:371,11,0	1/1:12,0:10:13.23:165,13,0	1/1:19,0:21:23.75:341,24,0	1/1:21,0:22:49.20:705,49,0	0/0:21,0:19:34.43:0,34,561	1/1:13,0:11:23.67:330,24,0	1/1:1,12:12:30.91:355,31,0	1/1:19,0:16:24.08:359,24,0	1/1:12,0:12:2.21:120,2,0	1/1:22,0:22:17.34:302,17,0	0/1:2,18:19:0:0,0,0	1/1:16,0:14:14.44:215,14,0	0/1:22,0:20:5.68:95,0,6	0/1:5,0:23:8.09:403,0,8	1/1:18,0:19:15.33:518,15,0	1/1:5,0:5:15.05:236,15,0
chr10	94797614	.	AGG	A	4585.57	PASS	AB=0.967;AC=49;AF=0.907;AN=54;BaseQRankSum=-0.216;DP=546;FS=0.000;HRun=3;HaplotypeScore=159.6108;InbreedingCoeff=0.7613;MQ=71.60;MQ0=13;MQRankSum=-3.485;QD=9.95;ReadPosRankSum=1.581;VQSLOD=1.4584;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:17.57:120,18,0	1/1:12,0:12:21.36:135,21,0	0/0:43,1:25:11.35:0,11,459	0/1:56,0:27:2.41:2,0,471	1/1:20,0:20:20.99:170,21,0	1/1:13,0:12:20.47:151,20,0	1/1:19,0:19:11.65:87,12,0	1/1:25,0:25:71.57:532,72,0	1/1:15,0:15:31.95:209,32,0	1/1:14,0:14:35.35:286,35,0	1/1:10,0:10:14.99:129,15,0	1/1:21,1:22:40.54:288,41,0	1/1:17,0:17:25.36:190,25,0	1/1:12,0:9:14.45:92,14,0	1/1:23,1:24:28.74:212,29,0	1/1:21,3:22:46.76:358,47,0	0/0:21,0:20:29.23:0,29,547	1/1:13,1:10:23.84:178,24,0	1/1:12,0:11:27.28:200,27,0	1/1:18,1:15:23.86:181,24,0	1/1:14,0:14:8.69:62,9,0	1/1:22,0:22:21.59:178,22,0	./.	1/1:14,0:14:14.65:105,15,0	1/1:19,0:18:8.51:49,9,0	1/1:22,0:22:14.46:229,14,0	1/1:18,1:19:44.44:327,44,0	1/1:7,1:8:14.47:116,14,0
chr10	94797616	.	G	GAGA	3458.38	PASS	AB=0.994;AC=40;AF=0.714;AN=56;BaseQRankSum=-2.704;DP=538;FS=9.292;HRun=0;HaplotypeScore=165.7925;InbreedingCoeff=0.2780;MQ=75.46;MQ0=13;MQRankSum=-0.410;QD=8.87;ReadPosRankSum=3.588;VQSLOD=2.7314;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:12:18.60:108,19,0	0/1:11,0:11:34.30:68,0,34	0/0:47,0:27:28.67:0,29,604	0/0:61,0:29:46.47:0,46,627	1/1:20,1:21:17.75:125,18,0	1/1:12,1:12:20.04:146,20,0	0/1:18,0:18:0.76:29,0,1	1/1:24,0:24:45.18:319,45,0	1/1:12,1:13:19.98:159,20,0	0/1:13,0:13:21.43:21,0,72	0/1:11,0:11:20.98:25,0,21	1/1:23,0:23:34.21:227,34,0	0/1:15,0:15:49.76:88,0,50	0/1:11,0:8:7.01:46,0,7	1/1:23,1:24:19.50:251,19,0	1/1:22,1:21:28.88:360,29,0	0/0:21,0:20:42.92:0,43,637	1/1:16,0:12:10.89:185,11,0	1/1:12,0:11:16.77:142,17,0	1/1:18,0:14:20.03:144,20,0	1/1:15,0:15:2.89:20,3,0	1/1:21,0:21:29.31:279,29,0	0/0:19,0:18:0:0,0,0	1/1:13,1:14:13.87:100,14,0	1/1:14,0:13:5.15:30,5,0	0/1:19,1:20:0.96:214,0,1	0/1:19,0:19:3.80:184,0,4	1/1:9,0:9:23.92:189,24,0
chr10	94799063	.	TGGGA	T	5087.20	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.702;DP=435;FS=3.357;HRun=0;HaplotypeScore=104.7543;InbreedingCoeff=0.7527;MQ=84.21;MQ0=3;MQRankSum=-4.927;QD=14.92;ReadPosRankSum=5.310;VQSLOD=4.3670;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:57.37:467,57,0	1/1:8,0:8:5.93:49,6,0	0/0:28,0:20:46.21:0,46,797	0/0:36,0:25:54.63:0,55,940	1/1:10,0:10:15.40:120,15,0	1/1:19,0:19:47.91:391,48,0	1/1:25,0:25:59.94:503,60,0	1/1:18,0:18:39.92:367,40,0	1/1:15,0:15:6.01:64,6,0	1/1:16,0:16:23.72:219,24,0	1/1:6,0:6:5.92:43,6,0	1/1:16,0:16:36.42:332,36,0	1/1:7,0:7:20.98:178,21,0	1/1:8,0:8:23.99:206,24,0	1/1:14,0:14:3.01:32,3,0	1/1:16,0:16:23.37:189,23,0	0/0:30,0:30:77.73:0,78,1662	1/1:12,0:12:13.30:175,13,0	1/1:19,0:19:38.55:312,39,0	1/1:3,10:13:2.98:21,3,0	1/1:15,0:15:19.15:164,19,0	1/1:7,0:7:14.99:127,15,0	1/1:10,0:10:20.93:166,21,0	1/1:19,0:18:33.24:250,33,0	1/1:11,0:11:20.93:168,21,0	1/1:13,0:13:30.04:288,30,0	1/1:12,0:12:6.02:64,6,0	1/1:8,0:8:23.95:194,24,0
chr10	94799065	.	GGAGGGAGAGAGAGGGAGAGAGA	G	8341.31	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-5.091;DP=431;FS=13.869;HRun=0;HaplotypeScore=220.3956;InbreedingCoeff=0.1033;MQ=83.37;MQ0=6;MQRankSum=-3.544;QD=24.68;ReadPosRankSum=0.919;VQSLOD=2.2245;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:99:557,0,111	1/1:1,0:8:6.02:198,6,0	0/0:27,0:19:40.35:0,40,657	0/0:36,0:25:59.64:0,60,749	1/1:10,0:10:21.04:292,21,0	0/1:17,0:17:99:349,0,748	0/1:27,0:27:99:498,0,445	1/1:17,0:17:42.13:707,42,0	1/1:2,0:14:6.02:326,6,0	1/1:16,0:16:36.11:495,36,0	1/1:6,0:6:9.02:112,9,0	0/1:16,0:16:99:320,0,294	0/1:7,0:7:54.76:55,0,578	0/1:10,0:8:99:203,0,230	1/1:1,0:15:3.01:163,3,0	1/1:16,0:16:27.02:373,27,0	0/0:30,0:30:78.60:0,79,3970	1/1:12,0:12:26.68:403,27,0	1/1:0,17:17:43.13:775,43,0	1/1:13,0:13:2.98:21,3,0	1/1:13,1:14:27.01:493,27,0	0/1:8,0:7:45.11:45,0,367	0/1:9,0:9:99:145,0,115	0/1:19,0:18:99:283,0,365	1/1:9,0:9:21.54:339,22,0	1/1:13,0:13:33.10:519,33,0	1/1:2,11:13:6.02:365,6,0	1/1:8,0:8:22.32:306,22,0
chr10	94799077	.	AGG	A	4490.72	PASS	AB=1.000;AC=47;AF=0.870;AN=54;BaseQRankSum=4.730;DP=392;FS=1.314;HRun=3;HaplotypeScore=86.9706;InbreedingCoeff=0.6411;MQ=72.20;MQ0=12;MQRankSum=-0.412;QD=14.92;ReadPosRankSum=2.741;VQSLOD=1.9903;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:53:450,53,0	1/1:8,0:8:5.78:32,6,0	0/0:22,0:14:27.83:0,28,250	0/0:29,0:18:3.25:0,3,199	1/1:10,0:9:17.97:148,18,0	1/1:15,0:15:41.93:344,42,0	1/1:23,0:23:45.25:395,45,0	1/1:13,0:13:23.40:296,23,0	1/1:15,0:13:5.68:29,6,0	1/1:12,0:12:26.85:206,27,0	1/1:4,0:4:5.94:43,6,0	1/1:15,0:15:38.14:313,38,0	1/1:8,0:8:23.97:200,24,0	1/1:11,0:9:20.16:186,20,0	1/1:15,0:14:2.84:14,3,0	1/1:12,0:12:20.90:167,21,0	0/0:24,6:30:18.22:0,18,450	1/1:9,0:9:23.94:195,24,0	1/1:20,0:20:6.98:225,7,0	./.	1/1:13,0:12:13.11:162,13,0	1/1:9,0:8:14.99:126,15,0	1/1:6,0:6:11.98:98,12,0	1/1:21,0:20:35.74:280,36,0	1/1:9,0:8:20.91:167,21,0	1/1:10,0:10:15.10:199,15,0	0/1:12,0:12:3.73:21,0,4	1/1:8,0:8:23.96:196,24,0
chr10	94799563	.	GAA	G	2958.54	PASS	AB=0.817;AC=47;AF=0.839;AN=56;BaseQRankSum=-0.925;DP=281;FS=15.290;HRun=15;HaplotypeScore=40.9394;InbreedingCoeff=0.4013;MQ=73.41;MQ0=6;MQRankSum=-0.351;QD=13.33;ReadPosRankSum=2.585;VQSLOD=0.8762;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:1.36:0,1,3	0/1:2,1:3:3.94:26,0,4	0/0:33,0:16:15.20:0,15,147	0/1:21,0:10:7.07:7,0,10	1/1:3,11:14:27.04:281,27,0	1/1:4,14:18:13.16:262,13,0	1/1:1,11:12:12.03:127,12,0	1/1:4,5:9:13.19:143,13,0	1/1:3,2:5:2.90:83,3,0	1/1:4,3:7:12.01:127,12,0	1/1:2,6:8:18.04:187,18,0	1/1:7,3:10:14.92:143,15,0	1/1:2,3:5:6.01:62,6,0	1/1:2,3:5:6.01:62,6,0	1/1:1,5:6:6.01:62,6,0	1/1:1,6:7:9.02:96,9,0	0/0:15,0:14:30.10:0,30,456	1/1:4,11:15:14.91:159,15,0	1/1:2,7:9:21.03:217,21,0	1/1:2,6:8:17.99:187,18,0	1/1:3,0:3:5.84:64,6,0	0/1:4,3:7:8.78:110,0,9	1/1:3,9:12:17.99:185,18,0	1/1:4,2:6:9:95,9,0	1/1:2,8:10:6.01:64,6,0	1/1:1,7:8:18.03:190,18,0	1/1:1,9:10:6.01:62,6,0	1/1:0,4:4:9.02:96,9,0
chr10	94799565	.	A	AG	85.23	PASS	AB=0.965;AC=17;AF=0.304;AN=56;BaseQRankSum=-0.850;DP=275;FS=32.955;HRun=0;HaplotypeScore=48.6805;InbreedingCoeff=-0.1885;MQ=67.46;MQ0=6;MQRankSum=1.315;QD=0.56;ReadPosRankSum=0.120;VQSLOD=0.2923;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:1,10:11:0.59:5,0,1	0/0:3,0:3:3.54:0,4,43	0/0:29,0:12:26.33:0,26,208	0/1:20,0:10:6.44:6,0,63	0/1:14,0:14:4.42:4,0,98	0/0:18,0:18:25.53:0,26,133	0/1:12,0:12:8.50:8,0,17	0/1:10,0:10:47.37:47,0,64	0/0:4,0:4:0.59:0,1,26	0/1:8,0:8:13.80:14,0,52	0/1:8,0:8:13.61:14,0,22	0/0:9,0:9:8.12:0,8,71	0/0:5,0:5:1.08:0,1,41	0/1:5,0:5:4.78:5,0,34	0/1:6,0:6:0.23:0,0,2	0/0:7,0:7:10.48:0,10,51	0/0:14,0:13:36.04:0,36,451	0/0:15,0:15:18.38:0,18,86	1/1:9,0:9:7.67:59,8,0	0/1:7,0:7:17.73:18,0,27	0/1:3,0:3:4.23:4,0,19	0/1:7,0:7:10.84:11,0,70	0/1:12,0:12:4.16:4,0,71	0/0:6,0:6:1.41:0,1,46	0/0:10,0:10:7.99:0,8,46	0/1:8,0:8:13.97:16,0,14	0/1:10,0:10:7.37:7,0,12	0/0:4,0:4:7.49:0,7,27
chr10	94799854	.	G	GAA	15270.98	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-7.672;DP=511;FS=9.334;HRun=7;HaplotypeScore=55.7300;InbreedingCoeff=0.9748;MQ=73.26;MQ0=0;MQRankSum=-2.480;QD=34.95;ReadPosRankSum=1.763;VQSLOD=3.8886;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:56:99:383,109,0	1/1:1,6:7:18.06:295,18,0	0/0:13,0:13:20.25:0,20,242	0/0:12,0:11:19.85:0,20,251	1/1:4,14:18:42.14:687,42,0	1/1:1,21:22:54.18:886,54,0	1/1:0,20:20:54.18:886,54,0	1/1:2,19:21:54.15:808,54,0	1/1:0,15:17:42.14:689,42,0	1/1:1,10:11:30.10:489,30,0	1/1:1,8:9:24:335,24,0	1/1:3,14:17:42.09:659,42,0	1/1:1,7:8:15.05:246,15,0	1/1:2,8:10:18.06:295,18,0	1/1:4,16:20:38.74:640,39,0	1/1:0,14:14:39.13:640,39,0	0/0:48,0:48:99:0,141,1605	1/1:5,25:30:70.79:1136,71,0	1/1:1,19:19:54.17:851,54,0	1/1:5,6:11:18.02:266,18,0	1/1:2,14:16:39.13:640,39,0	1/1:1,11:12:30.02:434,30,0	1/1:1,16:17:39.09:610,39,0	1/1:0,25:25:66.23:1083,66,0	1/1:2,8:10:24.08:394,24,0	1/1:2,15:17:45.15:735,45,0	1/1:1,23:24:57.19:936,57,0	1/1:0,5:5:15.05:246,15,0
chr10	94801134	.	ATGTGTGTGTGTGTGTG	A	452.14	PASS	AB=1.000;AC=10;AF=0.185;AN=54;BaseQRankSum=2.566;DP=512;FS=14.613;HRun=0;HaplotypeScore=198.7868;InbreedingCoeff=0.3776;MQ=70.60;MQ0=18;MQRankSum=-2.657;QD=5.58;ReadPosRankSum=-0.708;VQSLOD=1.6740;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:9.01:0,9,132	0/0:9,0:8:9.03:0,9,236	./.	0/0:46,0:28:0:0,0,0	0/0:18,0:16:18.06:0,18,488	0/0:17,0:16:3.48:0,3,44	0/0:24,0:23:3.06:0,3,8	0/0:19,0:18:10.57:0,11,238	0/0:14,0:14:6.02:0,6,164	0/0:16,0:16:21.96:0,22,849	0/0:12,0:12:21.05:0,21,672	1/1:11,0:11:5.88:127,6,0	0/0:15,0:15:11.96:0,12,130	0/0:14,0:14:8.94:0,9,104	0/0:8,0:11:24.08:0,24,574	0/0:11,0:18:17.42:0,17,365	0/0:14,0:20:5.98:0,6,149	0/0:25,0:31:12.30:0,12,988	1/1:16,1:15:0.62:126,1,0	1/1:15,4:18:3.01:90,3,0	0/0:25,5:29:0:0,0,0	0/0:17,0:16:9.02:0,9,111	0/0:8,0:8:0:0,0,0	0/1:13,0:13:16.51:17,0,38	0/0:13,0:14:6.02:0,6,266	0/1:11,0:11:29.70:88,0,30	1/1:8,2:10:3.01:131,3,0	0/0:7,0:8:6.02:0,6,222
chr10	94802698	.	CAAACA	C	14929.01	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-4.319;DP=578;FS=5.226;HRun=0;HaplotypeScore=125.4628;InbreedingCoeff=0.9131;MQ=60.93;MQ0=4;MQRankSum=0.255;QD=36.50;ReadPosRankSum=1.332;VQSLOD=4.4375;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:43:87.48:0,87,1018	1/1:0,12:12:33.11:696,33,0	0/0:17,0:11:24.23:0,24,470	0/0:23,0:12:8.05:0,8,388	1/1:2,20:22:57.19:1022,57,0	1/1:0,17:17:30.10:639,30,0	1/1:1,15:16:15.05:293,15,0	1/1:1,23:23:61.39:1051,61,0	1/1:0,15:15:26.84:575,27,0	0/0:33,0:32:47.57:0,48,658	0/0:22,0:22:1.68:0,2,426	1/1:0,11:11:9.03:192,9,0	1/1:1,12:13:20.87:447,21,0	1/1:2,12:14:18.06:383,18,0	1/1:0,12:12:24.08:479,24,0	1/1:1,16:17:26.74:574,27,0	0/0:31,0:31:55.05:0,55,2120	1/1:1,27:28:44.18:900,44,0	1/1:3,17:18:51.16:805,51,0	1/1:3,25:28:68.96:1241,69,0	1/1:1,7:8:12.04:256,12,0	1/1:0,26:26:66.17:1125,66,0	1/1:2,22:24:40.97:815,41,0	1/1:0,12:12:21.07:447,21,0	1/1:1,16:17:24.08:504,24,0	1/1:6,30:35:53.04:1399,53,0	1/1:0,28:28:33.11:703,33,0	1/1:0,9:9:18.06:383,18,0
chr10	94802704	.	A	AAC	2169.33	PASS	AB=0.971;AC=5;AF=0.089;AN=56;BaseQRankSum=-6.109;DP=579;FS=1.090;HRun=0;HaplotypeScore=145.7913;InbreedingCoeff=0.8057;MQ=60.64;MQ0=5;MQRankSum=-1.413;QD=26.14;ReadPosRankSum=-1.619;VQSLOD=3.8109;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:26.47:0,26,222	0/0:12,0:12:31.25:0,31,161	0/0:18,0:11:30.92:0,31,373	0/0:24,0:12:21.51:0,22,246	0/0:21,0:21:53.61:0,54,254	0/0:17,0:17:28.75:0,29,152	0/0:18,0:18:13.87:0,14,69	0/0:25,0:24:35.30:0,35,192	0/0:15,0:15:25.79:0,26,136	1/1:6,23:28:78.24:1307,78,0	1/1:8,13:21:63.16:983,63,0	0/0:12,0:12:11.63:0,12,72	0/0:13,0:13:19.11:0,19,105	0/0:12,0:12:17.25:0,17,91	0/0:13,0:13:22.50:0,22,115	0/0:16,0:16:25.68:0,26,137	0/0:34,0:34:89.67:0,90,1336	0/0:31,0:31:19.42:0,19,210	0/0:19,0:17:13.17:0,13,92	0/0:27,0:27:62.88:0,63,302	0/0:7,0:7:11.50:0,12,61	0/0:27,0:27:60.31:0,60,298	0/0:24,0:24:38.95:0,39,211	0/0:12,0:12:20.13:0,20,106	0/0:16,0:16:22.62:0,23,115	0/1:32,1:31:0.82:1,0,238	0/0:28,0:27:31.63:0,32,167	0/0:9,0:9:17.25:0,17,91
chr10	94802774	.	CCT	C	1806.63	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.737;DP=624;FS=0.576;HRun=0;HaplotypeScore=91.8874;InbreedingCoeff=0.9962;MQ=85.19;MQ0=1;MQRankSum=-2.049;QD=36.13;ReadPosRankSum=0.791;VQSLOD=5.8820;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,132,2433	0/0:14,0:14:42.06:0,42,716	0/0:22,0:22:57.18:0,57,946	0/0:16,0:16:42.07:0,42,685	0/0:28,0:28:84.29:0,84,1572	0/0:21,0:21:51.16:0,51,903	0/0:21,0:21:57.17:0,57,1007	0/0:32,0:32:96.27:0,96,1527	0/0:20,0:20:42.05:0,42,755	1/1:1,22:22:66.22:969,66,0	1/1:2,25:27:66.22:959,66,0	0/0:24,0:24:60.21:0,60,1113	0/0:15,0:15:41.96:0,42,702	0/0:15,0:15:30.10:0,30,560	0/0:22,0:22:51.17:0,51,955	0/0:14,0:14:23.98:0,24,449	0/0:36,0:36:99:0,105,1920	0/0:21,0:21:51.17:0,51,929	0/0:19,0:19:57.18:0,57,1008	0/0:26,0:26:78.25:0,78,1421	0/0:26,0:26:69.24:0,69,1291	0/0:19,0:19:51.17:0,51,954	0/0:23,0:23:51.12:0,51,924	0/0:13,0:13:36.12:0,36,673	0/0:17,0:17:36.12:0,36,651	0/0:25,1:26:31.06:0,31,1220	0/0:23,0:23:45.13:0,45,787	0/0:13,0:13:21.07:0,21,393
chr10	94805148	.	GGA	G	592.82	PASS	AB=0.900;AC=13;AF=0.260;AN=50;BaseQRankSum=2.672;DP=603;FS=22.474;HRun=0;HaplotypeScore=84.2523;InbreedingCoeff=0.2262;MQ=57.86;MQ0=8;MQRankSum=3.024;QD=2.71;ReadPosRankSum=1.554;VQSLOD=0.3137;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:46:6.02:0,6,83	./.	./.	./.	0/0:15,0:15:3.01:0,3,41	0/0:19,0:19:14.51:0,15,145	0/1:18,2:20:14.37:14,0,181	0/0:18,0:18:15.01:0,15,168	0/0:17,0:19:6.01:0,6,64	0/0:20,0:20:1.25:0,1,166	0/1:16,0:16:4.90:5,0,104	1/1:29,1:31:5.76:46,6,0	1/1:24,2:27:14.86:143,15,0	1/1:25,0:26:5.84:45,6,0	0/0:19,0:22:2.88:0,3,15	0/0:16,0:21:2.92:0,3,26	0/1:30,2:32:25.78:26,0,341	0/0:21,0:28:17.63:0,18,192	0/0:17,0:17:5.99:0,6,60	0/0:12,0:12:3:0,3,27	0/0:26,0:26:5.97:0,6,64	0/1:15,2:17:21:26,0,21	1/1:13,3:16:9.02:97,9,0	0/1:23,10:33:5.51:334,0,6	0/0:12,0:12:3:0,3,26	0/0:21,0:21:27.01:0,27,307	0/0:17,0:17:22.31:0,22,260	0/0:9,0:12:3.40:0,3,18
chr10	94805627	.	TACACACACACACACATGCACGCACGCACACACACACACAC	T	10298.70	PASS	AB=0.877;AC=39;AF=0.750;AN=52;BaseQRankSum=-2.999;DP=587;FS=0.000;HRun=0;HaplotypeScore=399.0029;InbreedingCoeff=0.5338;MQ=67.30;MQ0=12;MQRankSum=-6.410;QD=25.62;ReadPosRankSum=3.153;VQSLOD=2.2589;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:41.85:0,42,1189	1/1:1,0:7:4.83:245,5,0	0/0:47,0:31:11.49:0,11,1499	0/1:55,0:27:20.89:21,0,630	0/1:7,0:17:0:0,0,0	1/1:5,15:20:12.04:1034,12,0	0/1:23,0:23:31.20:31,0,81	1/1:17,0:17:39.13:1076,39,0	1/1:12,0:14:0.11:440,0,0	0/0:25,0:25:66.22:0,66,4903	0/0:8,0:8:17.80:0,18,1473	1/1:19,0:19:12.04:276,12,0	1/1:2,11:13:3.01:302,3,0	1/1:6,18:24:12.51:1166,13,0	1/1:3,0:13:6.02:466,6,0	1/1:6,0:14:5.66:469,6,0	0/0:36,0:36:75.21:0,75,7540	1/1:20,0:20:24.08:639,24,0	1/1:13,0:11:15.05:289,15,0	1/1:7,15:22:9.03:696,9,0	1/1:32,0:31:9:137,9,0	1/1:6,13:19:2.74:191,3,0	./.	./.	1/1:4,1:18:9.03:665,9,0	1/1:22,0:22:51.17:1612,51,0	1/1:13,0:13:9.03:329,9,0	1/1:7,0:7:6.02:215,6,0
chr10	94805642	.	A	ACACACG	6296.86	PASS	AB=0.929;AC=40;AF=0.769;AN=52;BaseQRankSum=-2.129;DP=473;FS=0.000;HRun=0;HaplotypeScore=123.4876;InbreedingCoeff=0.6103;MQ=53.02;MQ0=18;MQRankSum=-6.419;QD=20.58;ReadPosRankSum=2.402;VQSLOD=4.0116;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:38:44.56:0,45,898	1/1:7,0:6:1.55:4,2,0	0/0:33,0:21:11.49:0,11,1127	0/1:42,0:15:20.89:21,0,472	0/1:10,1:12:0.01:0,0,0	1/1:16,0:16:9.03:285,9,0	1/1:0,14:17:5.97:77,6,0	1/1:3,10:13:39.13:1132,39,0	1/1:3,2:12:15.94:296,16,0	0/0:27,0:29:80.84:0,81,1635	0/0:12,0:12:17.80:0,18,395	1/1:0,12:16:12.04:276,12,0	1/1:11,0:12:3.01:64,3,0	1/1:18,0:18:11.69:303,12,0	1/1:10,1:11:5.38:82,5,0	1/1:8,1:9:3.48:77,3,0	0/0:30,0:31:81.10:0,81,1583	1/1:0,2:13:24.08:639,24,0	1/1:3,2:5:15.05:309,15,0	1/1:15,0:16:9.03:270,9,0	1/1:11,6:18:8.34:136,8,0	1/1:13,0:15:2.55:52,3,0	./.	./.	1/1:14,0:14:7.27:120,7,0	1/1:1,16:18:51.17:1612,51,0	1/1:0,10:10:9.03:329,9,0	1/1:0,3:3:6.02:215,6,0
chr10	94805647	.	C	CGT	1861.44	PASS	AB=1.000;AC=34;AF=0.630;AN=54;BaseQRankSum=6.888;DP=417;FS=0.608;HRun=0;HaplotypeScore=117.3687;InbreedingCoeff=0.4856;MQ=49.91;MQ0=19;MQRankSum=-7.068;QD=8.13;ReadPosRankSum=0.849;VQSLOD=3.2346;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:38:31.88:0,32,473	0/0:7,0:6:2.84:0,3,14	0/0:26,0:16:48.14:0,48,668	0/0:36,0:11:7.72:0,8,251	0/1:12,0:12:0.04:0,0,0	1/1:16,0:16:8.99:130,9,0	1/1:9,0:9:3.40:18,3,0	1/1:12,0:9:24.08:371,24,0	0/1:12,0:12:0.65:59,0,1	0/0:32,0:32:80.87:0,81,1140	0/0:11,0:11:15.05:0,15,230	1/1:12,0:12:8.99:101,9,0	1/1:12,0:12:2.74:12,3,0	1/1:18,0:18:11.45:107,11,0	0/1:11,0:11:8.14:16,0,8	0/1:9,0:9:8.38:16,0,8	0/0:30,0:29:72.23:0,72,1054	1/1:10,0:10:21.71:171,22,0	1/1:5,0:2:5.99:65,6,0	1/1:16,0:16:8.24:114,8,0	1/1:11,4:14:1.24:20,1,0	1/1:15,0:15:2.09:7,2,0	./.	0/1:6,0:6:0:1,0,0	0/1:14,0:14:7.68:17,0,8	1/1:16,0:15:42.61:595,43,0	1/1:7,0:7:9.03:123,9,0	1/1:2,0:2:6.02:86,6,0
chr10	94805652	.	GCA	G	368.39	PASS	AB=0.922;AC=26;AF=0.813;AN=32;BaseQRankSum=3.575;DP=380;FS=2.883;HRun=0;HaplotypeScore=112.4428;InbreedingCoeff=0.0868;MQ=45.90;MQ0=20;MQRankSum=-2.757;QD=1.67;ReadPosRankSum=2.516;VQSLOD=1.7046;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:35:0.47:0,0,1	1/1:7,0:6:2.84:14,3,0	./.	./.	0/1:12,0:12:0:0,0,0	1/1:16,0:16:2.84:14,3,0	./.	./.	0/1:10,0:10:5.38:8,0,5	0/1:25,6:31:1.33:199,0,1	1/1:6,4:11:3.01:33,3,0	./.	1/1:12,0:12:2.84:14,3,0	1/1:18,0:18:8.52:42,9,0	1/1:11,0:11:3.73:16,4,0	1/1:9,0:9:4.40:18,4,0	0/1:23,4:27:69.93:70,0,431	./.	./.	1/1:16,0:16:0.47:1,0,0	1/1:11,0:10:0.89:2,1,0	1/1:14,0:14:0.47:1,0,0	./.	./.	1/1:14,0:14:4.87:19,5,0	./.	./.	./.
chr10	94805672	.	A	ACGTG	286.90	PASS	AB=0.850;AC=3;AF=0.054;AN=56;BaseQRankSum=2.247;DP=473;FS=0.992;HRun=0;HaplotypeScore=212.8043;InbreedingCoeff=0.1146;MQ=42.54;MQ0=10;MQRankSum=-3.168;QD=4.48;ReadPosRankSum=-0.542;VQSLOD=2.6955;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:28:0.15:0,0,0	0/0:6,0:6:6.02:0,6,82	0/0:10,0:4:9.03:0,9,123	0/0:15,0:3:9.03:0,9,178	0/0:18,0:18:2.70:0,3,58	0/0:27,0:27:26.95:0,27,437	0/0:13,0:13:19.86:0,20,269	0/0:11,0:9:5.94:0,6,258	0/0:7,0:7:11.83:0,12,159	0/1:28,6:34:99:361,0,1002	0/0:11,0:11:12.04:0,12,198	0/0:12,0:12:36.12:0,36,635	0/0:23,0:23:36.10:0,36,546	0/0:25,0:25:27.03:0,27,439	0/0:14,0:14:3.17:0,3,81	0/0:15,0:15:6.39:0,6,110	0/0:32,0:31:84.25:0,84,1486	0/0:9,0:8:17.89:0,18,341	0/0:16,0:16:22.27:0,22,634	0/0:24,0:24:17.64:0,18,291	0/0:29,0:27:23.61:0,24,428	0/0:25,0:25:27.05:0,27,434	0/0:7,0:7:18.06:0,18,310	0/0:12,0:12:18.06:0,18,308	0/0:19,0:19:9.28:0,9,154	0/0:19,0:17:42.14:0,42,725	0/0:6,0:6:18.06:0,18,324	0/0:4,0:4:12.03:0,12,175
chr10	94805966	.	T	TG	2584.22	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-4.259;DP=699;FS=4.931;HRun=6;HaplotypeScore=89.2887;InbreedingCoeff=0.9793;MQ=76.80;MQ0=0;MQRankSum=-1.912;QD=31.14;ReadPosRankSum=-0.899;VQSLOD=3.5577;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:34:84.27:1057,84,0	0/0:6,0:6:9.02:0,9,92	0/0:26,0:26:53.19:0,53,556	0/0:22,0:22:59.27:0,59,560	0/0:22,0:22:54.11:0,54,545	0/0:20,0:20:57.12:0,57,580	0/0:19,0:19:54.12:0,54,551	0/0:33,0:33:78.16:0,78,795	0/0:22,0:22:63.14:0,63,643	1/1:1,33:34:96.28:1180,96,0	1/1:0,15:15:39.12:490,39,0	0/0:37,0:37:93.14:0,93,926	0/0:16,0:16:48.11:0,48,489	0/0:31,0:31:84.16:0,84,845	0/0:34,0:34:99:0,102,1034	0/0:25,0:25:72.15:0,72,728	0/0:16,0:16:45.07:0,45,450	0/0:25,0:25:75.12:0,75,753	0/0:31,0:32:84.19:0,84,857	0/0:32,0:32:87.19:0,87,887	0/0:24,0:24:72.16:0,72,735	0/0:24,0:24:54.12:0,54,550	0/0:24,0:24:57.04:0,57,567	0/0:34,0:34:99:0,99,991	0/0:22,0:22:63.13:0,63,636	0/0:35,0:35:68.67:0,69,921	0/0:23,0:23:63.13:0,63,637	0/0:12,0:12:29.96:0,30,276
chr10	94806297	.	AG	A	11829.46	PASS	AB=0.786;AC=52;AF=0.929;AN=56;BaseQRankSum=1.828;DP=670;FS=7.835;HRun=10;HaplotypeScore=77.2431;InbreedingCoeff=-0.0690;MQ=72.79;MQ0=0;MQRankSum=-1.583;QD=17.66;ReadPosRankSum=0.682;VQSLOD=5.3886;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,25:37:78.09:643,78,0	1/1:6,11:19:37.06:298,37,0	0/1:13,4:16:91.28:131,0,91	0/1:10,1:11:26.36:26,0,100	1/1:3,15:19:44.03:371,44,0	1/1:9,14:23:38.97:339,39,0	1/1:2,26:30:79.06:663,79,0	1/1:9,12:21:32.59:286,33,0	1/1:1,16:17:47.99:417,48,0	1/1:7,33:40:99:911,105,0	1/1:5,13:18:35.94:312,36,0	1/1:7,22:29:71:601,71,0	1/1:5,23:28:65.98:573,66,0	1/1:2,14:16:35.99:313,36,0	1/1:1,21:23:59.03:501,59,0	1/1:3,16:20:44.02:371,44,0	0/1:32,7:40:82.84:83,0,727	1/1:6,17:24:53:449,53,0	1/1:11,16:27:47.96:416,48,0	1/1:6,15:21:44.97:390,45,0	1/1:12,29:41:86.96:755,87,0	1/1:2,12:14:35.99:312,36,0	1/1:5,20:26:56.02:475,56,0	1/1:1,19:21:53.03:449,53,0	1/1:1,17:19:50.02:423,50,0	1/1:5,27:32:77.96:677,78,0	1/1:4,18:22:50.98:443,51,0	0/1:3,11:14:3.18:204,0,3
chr10	94807655	.	T	TTTTG	2622.42	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.153;DP=597;FS=0.573;HRun=0;HaplotypeScore=106.7668;InbreedingCoeff=0.8302;MQ=69.64;MQ0=0;MQRankSum=-3.700;QD=29.47;ReadPosRankSum=-2.547;VQSLOD=2.8106;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:38:54.17:849,54,0	0/0:14,0:14:36.12:0,36,585	0/0:28,0:26:23.97:0,24,335	0/0:13,0:13:14.71:0,15,159	0/0:29,0:29:69.23:0,69,1105	0/0:21,0:21:48.16:0,48,784	0/1:13,0:13:27.46:27,0,275	0/0:31,0:31:51.14:0,51,743	0/0:15,0:16:36.11:0,36,544	1/1:8,10:19:39.12:882,39,0	1/1:5,13:19:45.07:1013,45,0	0/0:16,0:16:30.10:0,30,484	0/0:19,0:19:51.15:0,51,785	0/0:17,0:17:39.10:0,39,567	0/0:12,0:11:24.08:0,24,392	0/0:18,0:18:42.09:0,42,591	0/0:29,0:29:75.24:0,75,1191	0/0:20,0:20:42.14:0,42,679	0/0:23,0:23:33.08:0,33,471	0/0:24,0:24:48.15:0,48,758	0/0:10,0:10:24.05:0,24,343	0/0:21,0:21:48.16:0,48,757	0/0:19,0:19:42.13:0,42,655	0/0:22,0:22:51.16:0,51,810	0/0:19,0:19:33.11:0,33,539	0/0:35,0:35:78.24:0,78,1224	0/0:30,0:29:66.23:0,66,1078	0/0:22,0:22:57.19:0,57,929
chr10	94811733	.	A	AGAAATT	33516.22	PASS	AB=0.567;AC=43;AF=0.768;AN=56;BaseQRankSum=-9.396;DP=547;FS=4.237;HRun=0;HaplotypeScore=105.7133;InbreedingCoeff=0.8995;MQ=86.40;MQ0=0;MQRankSum=-16.288;QD=87.74;ReadPosRankSum=0.513;VQSLOD=6.5711;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,3296	1/1:1,7:10:21.07:735,21,0	0/0:27,0:27:75.01:0,75,1535	0/0:33,0:32:84.09:0,84,1860	1/1:3,15:19:48.16:1604,48,0	1/1:3,8:15:33.11:1078,33,0	1/1:5,15:21:48.16:1630,48,0	1/1:6,23:34:99:3271,99,0	1/1:3,7:12:30.10:954,30,0	0/0:19,0:19:57.19:0,57,1369	0/0:13,0:13:36.11:0,36,804	1/1:2,21:25:69.24:2540,69,0	1/1:2,8:11:30.10:1032,30,0	1/1:2,13:15:45.15:1598,45,0	1/1:2,13:16:45.15:1588,45,0	1/1:2,7:11:27.09:976,27,0	0/0:28,0:28:84.28:0,84,2080	1/1:2,7:10:24.08:901,24,0	1/1:4,14:21:60.16:1983,60,0	1/1:3,11:17:45.15:1508,45,0	1/1:1,7:10:18.06:675,18,0	1/1:2,20:23:60.21:2160,60,0	1/1:7,18:25:72.20:2296,72,0	1/1:6,9:17:27.56:823,28,0	1/1:1,19:21:54.19:1981,54,0	0/1:4,9:17:15.05:1484,0,15	1/1:2,11:17:36.12:1350,36,0	1/1:0,13:14:36.12:1351,36,0
chr10	94812360	.	GGTGCTTTTAAATCA	G	25936.31	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=14.280;DP=542;FS=11.449;HRun=0;HaplotypeScore=224.8008;InbreedingCoeff=0.9442;MQ=80.96;MQ0=0;MQRankSum=-13.122;QD=65.33;ReadPosRankSum=2.210;VQSLOD=2.9604;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.27:0,78,4754	1/1:1,5:6:12.04:488,12,0	0/0:16,0:16:36.12:0,36,1279	0/0:22,0:22:54.19:0,54,2743	1/1:3,13:16:30.10:1039,30,0	1/1:4,27:31:57.20:2299,57,0	1/1:5,11:16:30.10:1141,30,0	1/1:13,11:24:33.11:1149,33,0	1/1:3,16:19:48.16:1765,48,0	0/0:25,0:25:69.24:0,69,4536	0/0:24,0:24:66.23:0,66,4215	1/1:4,20:24:48.16:1946,48,0	1/1:2,15:17:36.12:1415,36,0	1/1:7,13:20:36.12:1438,36,0	1/1:3,13:16:30.10:1170,30,0	1/1:4,19:23:36.12:1403,36,0	0/0:29,0:29:72.25:0,72,4531	1/1:4,8:12:12.04:483,12,0	1/1:8,15:23:39.09:1087,39,0	1/1:2,18:20:51.13:1715,51,0	1/1:11,4:15:3.01:117,3,0	1/1:5,12:17:24.08:827,24,0	1/1:4,13:17:26.86:987,27,0	1/1:7,10:17:18.06:725,18,0	1/1:4,9:13:21.07:848,21,0	1/1:4,18:22:51.17:1819,51,0	1/1:3,20:23:39.13:1586,39,0	1/1:1,5:6:12.04:488,12,0
chr10	94813006	.	T	TTG	6721.69	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=3.988;DP=605;FS=4.115;HRun=0;HaplotypeScore=118.2700;InbreedingCoeff=0.8421;MQ=65.75;MQ0=6;MQRankSum=-0.165;QD=14.97;ReadPosRankSum=7.307;VQSLOD=4.2836;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,1136	1/1:6,0:6:11.75:123,12,0	0/0:37,0:15:22.40:0,22,236	0/1:26,0:11:19.49:19,0,47	1/1:18,8:28:48.69:547,49,0	1/1:17,0:17:31.74:211,32,0	1/1:27,0:26:33.69:219,34,0	1/1:31,0:30:47.83:604,48,0	1/1:22,0:22:55.96:625,56,0	0/0:19,0:19:39.71:0,40,314	0/0:14,0:14:27.66:0,28,220	1/1:11,0:11:11.74:97,12,0	1/1:14,0:14:18.48:106,18,0	1/1:14,0:14:17.49:139,17,0	1/1:22,0:21:4.87:307,5,0	1/1:23,0:23:30.91:318,31,0	0/0:47,0:46:99:0,103,829	1/1:27,0:27:30.96:486,31,0	1/1:8,11:19:47.49:474,47,0	1/1:10,7:18:30.72:260,31,0	1/1:16,1:17:26.59:244,27,0	1/1:10,0:10:21.28:128,21,0	1/1:19,0:19:27.77:182,28,0	1/1:36,0:36:58.95:417,59,0	1/1:10,0:9:25.98:210,26,0	1/1:24,0:24:20.10:466,20,0	1/1:14,0:14:19.90:250,20,0	1/1:11,0:11:26.80:291,27,0
chr10	94813007	.	T	TG	6000.86	PASS	AB=0.745;AC=43;AF=0.768;AN=56;BaseQRankSum=7.266;DP=609;FS=11.115;HRun=0;HaplotypeScore=111.2826;InbreedingCoeff=0.7706;MQ=64.83;MQ0=6;MQRankSum=-1.455;QD=13.31;ReadPosRankSum=8.795;VQSLOD=4.7437;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1110	0/1:3,3:6:2.87:48,0,3	0/0:36,0:14:22.35:0,22,229	0/1:28,0:11:0.98:1,0,83	1/1:17,11:28:32.55:368,33,0	1/1:10,8:18:42.48:345,42,0	1/1:3,23:26:37.76:333,38,0	1/1:19,11:29:32.46:522,32,0	1/1:16,7:23:48.64:449,49,0	0/0:20,0:20:46.88:0,47,388	0/0:16,0:16:30.03:0,30,243	1/1:1,11:12:11.73:116,12,0	1/1:3,13:16:19.12:172,19,0	1/1:0,14:14:18.01:168,18,0	1/1:5,15:21:8.41:212,8,0	1/1:3,16:21:27.10:245,27,0	0/0:47,0:46:99:0,120,977	1/1:6,18:25:18.54:332,19,0	1/1:11,6:15:23.60:247,24,0	1/1:12,6:17:26.85:206,27,0	1/1:3,13:16:20.50:201,21,0	1/1:3,8:11:22.98:159,23,0	1/1:2,18:20:35.08:293,35,0	1/1:5,31:37:73.31:708,73,0	1/1:6,4:9:25.73:163,26,0	0/1:6,19:25:5.65:342,0,6	1/1:6,9:16:13.21:159,13,0	1/1:2,9:11:26.58:213,27,0
chr10	94813010	.	T	TTG	207.89	PASS	AB=0.965;AC=13;AF=0.232;AN=56;BaseQRankSum=2.002;DP=621;FS=19.202;HRun=0;HaplotypeScore=139.1807;InbreedingCoeff=-0.0009;MQ=65.86;MQ0=6;MQRankSum=-1.224;QD=0.94;ReadPosRankSum=-0.719;VQSLOD=1.4478;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,112,1169	1/1:5,1:6:2.62:24,3,0	0/0:41,0:16:22.32:0,22,209	0/0:30,0:12:6.06:0,6,75	0/1:31,0:31:32.87:33,0,132	0/0:17,0:17:26.40:0,26,225	0/0:27,0:26:27.96:0,28,208	0/1:26,0:25:1.23:1,0,86	0/1:23,0:23:38.34:56,0,38	0/0:23,0:23:58.79:0,59,529	0/0:16,0:16:38.48:0,38,328	0/0:11,0:11:3.43:0,3,51	0/0:17,0:17:9.12:0,9,110	0/0:13,0:13:13.82:0,14,82	0/0:22,0:21:3.99:0,4,82	0/1:19,1:20:18.87:19,0,44	0/0:46,0:45:99:0,118,1032	0/1:23,3:26:34.56:62,0,35	0/1:17,1:16:7.70:37,0,8	0/1:17,0:17:15.84:16,0,70	0/0:16,0:16:11.89:0,12,69	0/0:13,0:13:30.52:0,31,165	0/0:23,0:23:29.24:0,29,194	0/0:36,0:36:59.44:0,59,422	1/1:10,0:9:6.68:61,7,0	0/1:26,0:26:27.53:28,0,102	0/1:16,1:17:17.81:18,0,18	0/0:11,0:11:2.41:0,2,58
chr10	94813011	.	T	TG	1278.40	PASS	AB=0.763;AC=19;AF=0.339;AN=56;BaseQRankSum=2.710;DP=623;FS=10.796;HRun=0;HaplotypeScore=119.8898;InbreedingCoeff=-0.1488;MQ=65.78;MQ0=6;MQRankSum=0.119;QD=3.96;ReadPosRankSum=2.484;VQSLOD=2.4761;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,112,1140	0/1:2,2:6:16.20:16,0,20	0/0:41,0:16:25.12:0,25,213	0/0:30,0:12:3.24:0,3,95	0/1:23,10:33:55.70:183,0,56	0/0:17,0:17:22.93:0,23,140	0/1:25,2:26:2.33:2,0,111	0/1:7,9:25:92.40:109,0,92	1/1:16,7:23:16.85:205,17,0	0/0:23,0:23:62.16:0,62,545	0/0:16,0:16:38.20:0,38,325	0/1:10,1:11:12.86:13,0,24	0/0:17,0:17:11.52:0,12,49	0/1:10,2:12:9.66:10,0,30	0/1:14,8:21:30:89,0,30	0/1:14,6:20:18.63:107,0,19	0/0:46,0:45:99:0,124,1054	0/1:17,10:27:44.93:156,0,45	0/1:13,5:16:10.36:82,0,10	0/1:14,4:17:42.05:80,0,42	0/1:13,3:16:37.92:48,0,38	0/0:13,0:13:27.42:0,27,121	0/0:22,1:23:23.44:0,23,123	0/0:34,2:36:9.38:0,9,212	1/1:6,4:9:5.88:71,6,0	0/1:17,9:26:18.13:100,0,18	0/1:12,4:17:1.28:116,0,1	0/1:4,7:11:10.62:57,0,11
chr10	94815251	.	TTTTA	T	17553.56	PASS	AB=0.514;AC=43;AF=0.768;AN=56;BaseQRankSum=11.455;DP=586;FS=33.715;HRun=0;HaplotypeScore=102.7001;InbreedingCoeff=0.8988;MQ=77.20;MQ0=1;MQRankSum=-4.515;QD=40.17;ReadPosRankSum=2.787;VQSLOD=2.6728;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:87.28:0,87,2189	1/1:1,12:12:33.11:589,33,0	0/0:17,0:17:45.15:0,45,1056	0/0:23,0:22:53.50:0,53,1267	1/1:3,18:21:47.67:700,48,0	1/1:2,22:24:42.14:750,42,0	1/1:1,18:19:39.13:696,39,0	1/1:3,30:33:90.25:1490,90,0	1/1:3,15:18:42.14:749,42,0	0/0:26,0:26:72.18:0,72,1745	0/0:19,0:19:54.19:0,54,1380	1/1:3,13:16:39.13:694,39,0	1/1:2,28:30:66.23:1178,66,0	1/1:0,11:11:21.07:375,21,0	1/1:1,16:17:42.10:716,42,0	1/1:2,9:11:24.08:429,24,0	0/0:29,0:29:75.24:0,75,1880	1/1:2,12:14:30.10:536,30,0	1/1:3,26:29:78.24:1332,78,0	1/1:3,16:19:45.15:804,45,0	1/1:3,25:28:48.16:857,48,0	1/1:3,21:24:50.98:836,51,0	1/1:1,16:17:38.73:659,39,0	1/1:1,27:28:66.23:1179,66,0	1/1:0,18:18:48.16:857,48,0	0/1:1,17:18:23.24:856,0,23	1/1:3,17:20:48.12:823,48,0	1/1:0,9:9:27.04:448,27,0
chr10	94815848	.	GTATATCTATTA	G	3520.21	PASS	AB=0.964;AC=5;AF=0.089;AN=56;BaseQRankSum=9.875;DP=695;FS=3.011;HRun=0;HaplotypeScore=217.7806;InbreedingCoeff=0.7801;MQ=65.39;MQ0=0;MQRankSum=-8.107;QD=49.58;ReadPosRankSum=0.698;VQSLOD=3.5645;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,187,9680	0/0:12,0:12:36.12:0,36,2073	0/0:25,0:22:62.58:0,63,2875	0/0:19,0:17:51.15:0,51,2473	0/0:17,0:17:45.15:0,45,2452	0/0:15,0:15:45.15:0,45,2571	0/0:28,0:28:81.26:0,81,3968	0/0:40,0:40:99:0,120,6098	0/0:22,0:22:66.21:0,66,3585	1/1:2,28:30:78.08:2502,78,0	1/1:1,13:14:30:991,30,0	0/0:30,0:30:87.30:0,87,4930	0/0:32,0:32:96.31:0,96,5238	0/0:23,0:23:69.24:0,69,3852	0/0:32,0:32:96.33:0,96,5267	0/0:19,0:19:54.19:0,54,3098	0/0:30,0:30:90.24:0,90,4829	0/0:25,0:25:75.26:0,75,4224	0/0:25,0:25:72.25:0,72,3809	0/0:16,0:16:45.09:0,45,2362	0/0:40,0:40:99:0,120,6892	0/0:18,0:18:51.18:0,51,2708	0/0:16,0:16:48.16:0,48,2718	0/0:23,0:23:66.23:0,66,3639	0/0:20,0:20:57.20:0,57,3109	0/1:26,1:27:27.21:27,0,4202	0/0:26,0:26:78.27:0,78,4319	0/0:9,0:9:27.09:0,27,1236
chr10	94816106	.	A	AGTAAAT	21759.51	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-0.550;DP=485;FS=95.194;HRun=0;HaplotypeScore=98.0607;InbreedingCoeff=0.9698;MQ=84.16;MQ0=0;MQRankSum=-12.520;QD=65.74;ReadPosRankSum=1.732;VQSLOD=1.5812;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,2400	1/1:0,3:3:9.03:313,9,0	0/0:23,0:23:57.14:0,57,1113	0/0:20,0:20:36.16:0,36,894	1/1:7,9:19:27.09:735,27,0	1/1:4,7:13:24.08:820,24,0	1/1:6,12:19:36.12:1066,36,0	1/1:12,12:23:57.14:1492,57,0	1/1:4,12:22:45.15:1476,45,0	0/0:30,0:30:87.30:0,87,1969	0/0:14,0:14:35.94:0,36,610	1/1:6,12:19:42.14:1417,42,0	1/1:5,8:16:36.12:1150,36,0	1/1:7,11:19:33.11:1105,33,0	1/1:2,11:14:36.12:1237,36,0	1/1:4,6:11:24.55:786,25,0	0/0:23,0:23:57.11:0,57,1136	1/1:7,5:12:30.10:1030,30,0	1/1:5,9:14:33.11:1060,33,0	1/1:5,9:16:33.11:907,33,0	1/1:8,8:17:33.11:1021,33,0	1/1:2,5:9:18.06:456,18,0	1/1:4,6:10:21.07:692,21,0	1/1:6,8:14:18.06:593,18,0	1/1:3,9:12:18.06:595,18,0	1/1:4,19:25:66.19:2014,66,0	1/1:3,13:19:45.15:1499,45,0	1/1:0,3:3:9.03:296,9,0
chr10	94816717	.	A	AGTAAAT	9540.07	PASS	AC=34;AF=1.000;AN=34;DP=101;FS=0.000;HRun=0;HaplotypeScore=137.6605;InbreedingCoeff=-0.0459;MQ=38.29;MQ0=0;QD=95.40;VQSLOD=6.0952;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,2:4:12.04:405,12,0	./.	./.	1/1:4,11:15:45.15:1383,45,0	1/1:1,5:6:18.06:612,18,0	1/1:1,0:1:3.01:90,3,0	./.	1/1:3,3:6:18.06:605,18,0	./.	./.	1/1:2,4:6:18.06:603,18,0	1/1:2,2:4:12.04:405,12,0	1/1:0,2:2:6.02:208,6,0	1/1:1,2:3:6.02:196,6,0	1/1:3,0:3:9.03:301,9,0	./.	./.	./.	1/1:2,7:9:24.08:833,24,0	./.	1/1:1,7:8:24.08:752,24,0	1/1:3,8:11:30.10:960,30,0	1/1:1,0:1:3.01:90,3,0	1/1:0,3:3:9.03:313,9,0	1/1:1,4:5:15.05:521,15,0	1/1:7,6:13:39.13:1262,39,0	./.
chr10	94817426	.	C	CCCTCCCTT	6625.48	PASS	AB=0.998;AC=27;AF=0.482;AN=56;BaseQRankSum=11.411;DP=689;FS=13.686;HRun=0;HaplotypeScore=221.6078;InbreedingCoeff=-0.5959;MQ=55.32;MQ0=11;MQRankSum=-6.460;QD=11.04;ReadPosRankSum=-4.055;VQSLOD=1.4522;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:99:276,0,235	0/1:8,0:7:45.54:46,0,58	0/0:35,0:13:8.91:0,9,62	0/1:25,0:11:0:0,0,0	0/1:22,0:22:99:240,0,109	0/1:24,0:23:99:129,0,118	0/1:21,0:22:99:126,0,113	0/0:26,0:25:32.20:0,32,268	0/1:19,0:19:21.77:306,0,22	1/1:3,32:39:97.17:1705,97,0	1/1:1,14:18:26.50:420,27,0	0/1:30,0:30:99:302,0,188	0/1:29,0:29:99:189,0,147	0/1:29,0:29:55.71:56,0,329	0/1:28,0:28:99:179,0,151	0/1:13,0:13:54.85:55,0,103	0/0:28,0:28:65.05:0,65,1348	0/1:15,0:13:53.50:55,0,53	0/1:20,0:19:57.52:58,0,221	0/1:25,0:25:99:296,0,143	0/1:37,0:36:99:193,0,190	0/1:34,0:33:99:308,0,182	0/1:20,0:20:99:195,0,123	0/1:31,0:31:99:156,0,188	0/1:23,0:23:99:235,0,133	0/1:27,0:27:85.32:724,0,85	0/1:18,0:18:73.90:310,0,74	0/1:8,0:8:8.54:67,0,9
chr10	94817430	.	C	CCCTTCCTTCCTT	15615.11	PASS	AB=0.857;AC=47;AF=0.904;AN=52;BaseQRankSum=-1.446;DP=677;FS=6.168;HRun=0;HaplotypeScore=240.9774;InbreedingCoeff=0.2904;MQ=53.54;MQ0=12;MQRankSum=-3.624;QD=25.98;ReadPosRankSum=0.823;VQSLOD=3.4806;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:36:15.33:15,0,538	1/1:7,0:6:9.03:176,9,0	./.	./.	1/1:20,0:20:32.78:613,33,0	1/1:25,0:24:33.97:640,34,0	1/1:23,0:23:36.01:446,36,0	1/1:26,0:24:25.23:160,25,0	1/1:19,0:19:45.04:859,45,0	1/1:41,0:39:11.13:696,11,0	1/1:18,0:18:3.75:172,4,0	1/1:30,0:30:50.61:767,51,0	1/1:31,0:31:55.34:912,55,0	1/1:27,0:27:24.06:460,24,0	1/1:27,0:27:47.95:915,48,0	1/1:14,0:14:24.84:380,25,0	0/0:29,0:29:61.98:0,62,1704	1/1:16,0:14:18.01:251,18,0	1/1:19,0:18:14.08:322,14,0	1/1:12,12:25:24.03:848,24,0	1/1:35,0:34:52.58:992,53,0	1/1:31,0:30:48.06:908,48,0	1/1:21,0:21:30.08:567,30,0	0/1:31,0:31:29.64:762,0,30	1/1:24,0:24:51.12:880,51,0	1/1:10,16:30:54.17:2033,54,0	1/1:6,10:17:15.05:755,15,0	0/1:2,0:8:47.25:88,0,47
chr10	94817462	.	TCCTC	T	992.83	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=-1.860;DP=622;FS=2.757;HRun=0;HaplotypeScore=184.8493;InbreedingCoeff=-0.0847;MQ=51.52;MQ0=7;MQRankSum=-0.339;QD=3.53;ReadPosRankSum=-5.096;VQSLOD=1.3299;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:35:36.24:739,36,0	0/0:11,0:10:6.02:0,6,209	0/0:13,0:9:3.53:0,4,128	0/0:18,0:11:25.04:0,25,206	0/0:22,0:22:38.66:0,39,518	0/0:28,0:26:8.13:0,8,465	0/1:21,0:21:0.10:0,0,360	0/1:28,0:26:99:109,0,487	0/0:21,0:21:47.36:0,47,428	0/1:31,0:30:34.45:34,0,249	0/1:19,0:19:68.04:76,0,68	0/1:23,0:23:10.76:11,0,359	0/1:31,0:31:48.96:49,0,451	0/0:21,0:21:48.65:0,49,494	0/0:21,0:21:31.89:0,32,514	0/1:12,0:12:12.90:13,0,351	0/0:31,0:32:86.92:0,87,1752	0/0:15,0:13:6.08:0,6,193	0/0:12,0:12:22.57:0,23,247	0/0:21,0:21:2.56:0,3,337	0/0:35,0:34:56.55:0,57,781	0/0:25,0:24:23.97:0,24,509	0/0:16,0:16:3.69:0,4,329	0/1:29,0:29:30.92:31,0,475	0/1:24,0:24:3.04:3,0,536	0/1:28,0:27:71.81:72,0,561	0/0:20,0:19:16.36:0,16,298	0/0:10,0:10:25.23:0,25,365
chr10	94817642	.	GGTGTGTGTGTGT	G	3483.31	PASS	AB=0.993;AC=24;AF=0.462;AN=52;BaseQRankSum=8.257;DP=580;FS=0.000;HRun=0;HaplotypeScore=183.2854;InbreedingCoeff=-0.0789;MQ=61.19;MQ0=18;MQRankSum=-2.369;QD=9.19;ReadPosRankSum=-1.248;VQSLOD=1.8147;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:6.01:0,6,94	0/0:3,0:5:5.19:0,5,113	0/0:24,0:13:6:0,6,69	0/0:29,0:16:6.74:0,7,86	0/0:23,0:23:14.92:0,15,115	./.	0/1:27,0:27:54.28:144,0,54	0/1:30,0:29:99:103,0,130	0/1:18,0:18:63.61:178,0,64	0/0:19,0:19:29.95:0,30,265	0/0:12,0:12:5.96:0,6,43	0/1:30,0:30:59.81:493,0,60	0/1:17,0:17:8.44:249,0,8	0/1:18,0:18:37.52:157,0,38	0/1:28,0:26:99:204,0,124	1/1:27,0:27:4.21:157,4,0	0/0:29,0:27:51.13:0,51,1607	0/1:14,0:13:62.33:75,0,62	0/1:19,0:19:20.59:63,0,21	./.	1/1:35,0:35:5.61:237,6,0	0/1:17,0:18:41.60:106,0,42	1/1:7,0:6:8.95:67,9,0	0/1:29,0:27:17.15:18,0,17	1/1:10,0:10:2.46:25,2,0	1/1:22,0:20:39.11:812,39,0	1/1:15,0:14:9.03:267,9,0	0/1:13,0:12:72.84:127,0,73
chr10	94817667	.	GTGTGTGTGTGTGTGTCTGTCTGTC	G	7510.33	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=9.546;DP=608;FS=3.889;HRun=0;HaplotypeScore=230.6161;InbreedingCoeff=-0.1908;MQ=50.29;MQ0=31;MQRankSum=-1.075;QD=15.81;ReadPosRankSum=4.575;VQSLOD=3.4797;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:28:5.82:0,6,94	0/1:6,0:6:20.66:21,0,105	0/0:7,0:2:6:0,6,69	0/0:11,0:3:6.74:0,7,86	0/0:29,0:27:14.92:0,15,115	1/1:20,0:20:3.01:54,3,0	0/1:26,0:25:48.86:295,0,49	0/1:28,0:24:99:142,0,240	0/1:22,0:22:92.49:149,0,92	0/1:25,0:25:99:376,0,467	0/0:16,0:15:5.96:0,6,43	0/1:28,0:26:61.04:1220,0,61	0/1:18,0:18:9.01:522,0,9	0/1:30,0:28:35.11:450,0,35	0/1:31,0:29:99:267,0,124	1/1:27,0:27:4.58:224,5,0	0/0:39,0:37:99:0,102,5847	0/1:16,0:15:99:174,0,133	0/1:9,0:8:14.58:181,0,15	1/1:10,0:10:3.01:72,3,0	1/1:33,0:31:6.02:261,6,0	0/1:20,0:19:45.74:293,0,46	1/1:6,0:5:8.95:67,9,0	0/1:40,0:36:17.18:18,0,17	0/1:14,0:14:3.03:73,0,3	1/1:4,30:33:74.97:1750,75,0	1/1:5,10:14:8.72:567,9,0	0/1:17,0:14:73.13:335,0,73
chr10	94817669	.	GTGTGTGTGTGTGTCTGTCTGTCTGTC	G	5345.38	PASS	AB=0.969;AC=29;AF=0.518;AN=56;BaseQRankSum=8.673;DP=604;FS=1.129;HRun=0;HaplotypeScore=247.7669;InbreedingCoeff=-0.1779;MQ=50.35;MQ0=31;MQRankSum=-1.400;QD=10.98;ReadPosRankSum=3.975;VQSLOD=3.7271;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:29:6.01:0,6,94	0/1:6,0:6:15.30:23,0,15	0/0:5,0:2:6:0,6,86	0/0:11,0:3:3.89:0,4,32	0/1:28,0:26:12.40:18,0,12	1/1:19,0:19:3.01:35,3,0	0/1:26,0:25:41.84:266,0,42	0/1:28,0:24:99:156,0,224	0/1:22,0:22:49.23:49,0,102	0/1:25,0:25:99:230,0,511	0/0:16,0:15:6.02:0,6,81	0/1:28,0:26:39.55:1019,0,40	0/1:5,13:18:4.42:563,0,4	1/1:29,1:28:14.14:440,14,0	0/1:30,0:28:35.99:175,0,36	1/1:27,0:27:10.39:164,10,0	0/0:39,0:37:99:0,99,6554	0/1:17,0:16:75.53:76,0,209	0/1:10,0:9:15.16:44,0,15	1/1:10,0:10:3.01:47,3,0	1/1:30,0:28:5.91:113,6,0	0/1:20,1:20:27.28:311,0,27	1/1:6,0:5:4.52:12,5,0	0/1:40,0:36:0.22:0,0,0	0/0:14,0:14:3.35:0,3,79	0/1:34,0:33:80.69:848,0,81	1/1:15,0:14:7.52:466,8,0	0/1:17,0:14:10.17:291,0,10
chr10	94817671	.	GTGTGTGTGTGTCTGTCTGTCTGTC	G	7703.48	PASS	AB=0.892;AC=36;AF=0.643;AN=56;BaseQRankSum=5.494;DP=579;FS=1.222;HRun=0;HaplotypeScore=212.4519;InbreedingCoeff=0.0790;MQ=50.35;MQ0=31;MQRankSum=-0.316;QD=17.83;ReadPosRankSum=1.884;VQSLOD=3.7904;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:29:2.82:0,3,46	0/1:6,0:6:37.97:46,0,38	0/0:4,0:2:2.99:0,3,23	0/0:9,0:3:3.48:0,3,43	0/0:7,0:25:2.53:0,3,18	1/1:1,18:19:3.01:72,3,0	1/1:26,0:25:38.36:609,38,0	0/1:25,0:21:34.76:433,0,35	0/1:22,0:22:47.88:129,0,48	0/1:22,0:22:99:248,0,265	1/1:17,0:16:0.39:1,0,0	1/1:6,23:27:0.40:1347,0,0	1/1:16,1:17:14.60:622,15,0	0/1:9,21:28:3.61:516,0,4	0/1:4,0:27:35.87:274,0,36	1/1:1,0:27:10.11:230,10,0	0/0:37,0:35:96.24:0,96,5787	0/1:17,0:16:59.53:261,0,60	1/1:10,0:9:4.14:101,4,0	1/1:10,0:10:3.01:47,3,0	1/1:27,0:25:8.69:169,9,0	1/1:6,16:21:8.62:346,9,0	1/1:6,0:5:9.03:141,9,0	0/0:5,33:34:0:0,0,0	0/1:12,0:12:5.38:88,0,5	1/1:33,0:32:5.11:1123,5,0	1/1:13,0:12:7.93:510,8,0	1/1:5,8:10:5.81:392,6,0
chr10	94817673	.	GTGTGTGTGTCTGTCTGTC	G	6957.11	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=7.826;DP=564;FS=3.044;HRun=0;HaplotypeScore=177.4762;InbreedingCoeff=0.3753;MQ=50.16;MQ0=32;MQRankSum=-1.273;QD=16.25;ReadPosRankSum=1.219;VQSLOD=3.5579;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:30:3.01:0,3,46	1/1:5,0:5:10.49:150,10,0	0/0:4,0:2:3.01:0,3,42	0/0:7,0:2:0.47:0,0,1	0/1:23,0:21:0:0,0,0	1/1:19,0:19:3.01:54,3,0	1/1:25,0:24:22.12:270,22,0	0/1:24,0:20:21.15:154,0,21	1/1:3,19:22:12.04:497,12,0	0/1:19,0:19:17.44:563,0,17	0/0:16,0:15:5.78:0,6,41	1/1:28,0:26:19.89:879,20,0	1/1:17,0:17:5.39:385,5,0	1/1:29,0:27:13.37:325,13,0	0/1:27,0:25:12.02:390,0,12	1/1:27,0:27:11.60:368,12,0	0/0:38,0:36:99:0,99,4195	1/1:17,0:16:23.42:303,23,0	1/1:11,0:9:5.47:161,5,0	1/1:11,0:11:6.02:144,6,0	1/1:27,0:25:8.47:68,8,0	1/1:21,0:20:9.03:272,9,0	1/1:6,0:5:8.36:39,8,0	0/0:38,0:34:0:0,0,0	1/1:11,0:11:5.75:209,6,0	1/1:33,0:32:44.89:1073,45,0	1/1:13,0:12:8.99:401,9,0	1/1:13,0:10:5.81:252,6,0
chr10	94817675	.	GTGTGTGTCTGTCTGTC	G	7040.60	PASS	AB=1.000;AC=43;AF=0.796;AN=54;BaseQRankSum=8.197;DP=560;FS=0.703;HRun=0;HaplotypeScore=166.9180;InbreedingCoeff=0.3939;MQ=50.08;MQ0=31;MQRankSum=-2.121;QD=16.04;ReadPosRankSum=-0.069;VQSLOD=3.9253;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:30:2.99:0,3,23	0/1:5,0:5:7.30:99,0,7	./.	0/0:8,0:1:0.47:0,0,1	0/1:23,0:21:0:0,0,0	1/1:19,0:19:3.01:54,3,0	1/1:23,0:22:29.87:318,30,0	1/1:26,0:22:10.53:285,11,0	1/1:21,0:21:10.28:364,10,0	1/1:4,15:19:38.14:693,38,0	1/1:17,0:16:5.94:43,6,0	1/1:27,0:25:19.89:784,20,0	1/1:17,0:17:14.57:386,15,0	1/1:29,0:27:6.57:284,7,0	0/1:27,0:25:11.93:349,0,12	1/1:27,0:27:8.97:303,9,0	0/0:39,0:37:90.07:0,90,3534	1/1:16,0:15:32.19:461,32,0	1/1:11,0:9:11.18:174,11,0	1/1:11,0:11:6.02:144,6,0	1/1:28,0:26:8.81:73,9,0	1/1:19,0:18:9.01:211,9,0	1/1:6,0:5:8.98:72,9,0	0/0:38,0:34:0:0,0,0	1/1:11,0:11:12.03:225,12,0	1/1:33,0:32:67.75:1137,68,0	1/1:13,0:12:8.99:359,9,0	1/1:11,0:9:5.92:224,6,0
chr10	94817677	.	GTGTGTCTGTC	G	3820.53	PASS	AB=1.000;AC=31;AF=0.596;AN=52;BaseQRankSum=6.449;DP=556;FS=20.767;HRun=0;HaplotypeScore=164.1447;InbreedingCoeff=0.1448;MQ=50.42;MQ0=30;MQRankSum=-2.109;QD=9.85;ReadPosRankSum=1.264;VQSLOD=1.4273;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,24:30:2.99:0,3,23	0/1:6,0:6:5.12:115,0,5	./.	./.	0/1:23,0:21:0:0,0,0	1/1:19,0:19:3.01:36,3,0	0/1:23,0:22:21.47:143,0,21	0/1:25,0:22:37.69:38,0,60	1/1:20,0:20:12.04:243,12,0	1/1:18,0:18:9.39:378,9,0	0/0:17,0:16:5.11:0,5,23	1/1:26,0:24:20.08:487,20,0	0/1:17,0:17:2.15:196,0,2	0/1:29,0:27:4.20:162,0,4	1/1:27,0:25:8.97:210,9,0	1/1:27,0:27:8.71:176,9,0	0/0:40,0:38:90.27:0,90,2332	0/1:18,0:17:14.85:314,0,15	0/1:12,0:10:12.34:94,0,12	1/1:11,0:11:6.02:96,6,0	0/0:27,0:25:6.75:0,7,22	1/1:19,0:18:9.03:136,9,0	0/0:6,0:5:2.09:0,2,7	0/0:38,0:34:0:0,0,0	1/1:11,0:11:4.72:128,5,0	0/1:33,0:32:37.81:520,0,38	1/1:13,0:12:9.03:210,9,0	1/1:11,0:9:5.95:139,6,0
chr10	94817681	.	GTCTGTCTGTCTGTC	G	5254.79	PASS	AB=0.951;AC=29;AF=0.518;AN=56;BaseQRankSum=5.899;DP=550;FS=15.123;HRun=0;HaplotypeScore=164.0932;InbreedingCoeff=-0.0124;MQ=50.32;MQ0=29;MQRankSum=0.068;QD=13.54;ReadPosRankSum=1.988;VQSLOD=3.2477;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:30:0.47:0,0,1	0/1:5,0:5:20.82:89,0,21	0/0:5,0:2:6.01:0,6,88	0/0:6,0:3:4.83:0,5,88	0/0:23,0:21:2.94:0,3,18	1/1:19,0:19:3.01:72,3,0	0/1:21,0:20:99:283,0,119	0/1:14,11:22:89.01:389,0,89	1/1:20,0:20:12.03:292,12,0	0/1:17,0:17:23.50:357,0,24	0/0:9,0:14:5.55:0,6,63	1/1:25,0:24:19.40:741,19,0	0/1:17,0:17:40.11:303,0,40	0/1:29,0:27:4.91:266,0,5	1/1:27,0:25:12.02:294,12,0	1/1:26,0:26:8.60:213,9,0	0/0:38,0:36:87:0,87,3726	0/1:18,0:17:61.99:349,0,62	0/1:9,0:10:66.49:80,0,66	1/1:11,0:11:6.02:94,6,0	0/1:28,0:27:25.25:82,0,25	1/1:19,0:18:8.06:182,8,0	0/0:2,2:3:3.01:0,3,31	0/0:38,0:34:0:0,0,0	0/1:11,0:11:15.39:165,0,15	0/1:33,0:32:99:530,0,215	1/1:13,0:12:7.93:261,8,0	1/1:11,0:9:6.02:213,6,0
chr10	94817918	.	A	AC	14022.36	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-5.014;DP=374;FS=14.317;HRun=0;HaplotypeScore=45.1267;InbreedingCoeff=0.9645;MQ=77.87;MQ0=0;MQRankSum=-0.558;QD=45.38;ReadPosRankSum=4.303;VQSLOD=3.2755;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:12.04:0,12,167	1/1:0,8:8:24.08:383,24,0	0/0:13,0:13:32.69:0,33,413	0/0:6,0:6:17.99:0,18,194	1/1:0,21:21:60.20:957,60,0	1/1:0,22:22:66.23:1053,66,0	1/1:0,12:12:36.12:575,36,0	1/1:1,21:22:63.21:1003,63,0	1/1:0,16:16:45.15:718,45,0	0/0:7,0:6:18.06:0,18,251	0/0:9,0:9:20.98:0,21,249	1/1:0,10:10:27.09:430,27,0	1/1:0,12:12:36.12:575,36,0	1/1:0,13:13:39.05:566,39,0	1/1:0,6:6:18.06:287,18,0	1/1:1,11:12:33.11:526,33,0	0/0:26,0:26:78.25:0,78,1074	1/1:1,19:20:57.19:907,57,0	1/1:1,14:15:45.13:692,45,0	1/1:0,17:17:51.17:815,51,0	1/1:0,12:12:30.10:479,30,0	1/1:0,7:7:18.06:286,18,0	1/1:1,14:15:42.14:671,42,0	1/1:0,4:4:6.02:96,6,0	1/1:0,26:26:78.18:1215,78,0	1/1:0,11:11:33.09:495,33,0	1/1:0,16:16:45.15:718,45,0	1/1:0,12:12:36.12:575,36,0
chr10	94817975	.	GTTGTTA	G	5322.65	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=3.781;DP=300;FS=10.546;HRun=0;HaplotypeScore=84.6224;InbreedingCoeff=0.3015;MQ=70.10;MQ0=1;MQRankSum=-1.854;QD=22.46;ReadPosRankSum=-0.981;VQSLOD=3.0600;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:5:28.02:28,0,31	1/1:6,1:7:20.97:217,21,0	0/0:15,0:14:32.91:0,33,396	0/0:8,0:8:20.85:0,21,203	1/1:14,3:17:29.78:269,30,0	1/1:6,2:8:23.97:286,24,0	1/1:1,1:2:6.01:96,6,0	0/1:42,0:42:99:354,0,897	1/1:5,8:13:38.99:638,39,0	0/0:7,0:6:9.40:0,9,97	0/0:6,0:6:17.93:0,18,196	1/1:3,3:7:21.03:339,21,0	1/1:5,2:7:18.01:242,18,0	1/1:4,1:5:12:113,12,0	1/1:5,4:9:27.02:409,27,0	1/1:5,2:7:18.01:210,18,0	0/0:27,0:27:78.02:0,78,2056	1/1:13,2:15:22.73:462,23,0	0/1:12,0:12:99:205,0,143	0/1:4,0:4:30.93:31,0,64	0/1:5,0:5:15.18:15,0,111	1/1:6,2:8:20.93:259,21,0	1/1:5,2:7:18:203,18,0	1/1:0,3:3:5.93:88,6,0	1/1:12,4:16:44.51:545,45,0	0/1:9,0:9:99:137,0,105	0/1:10,0:10:99:108,0,225	0/1:19,0:19:68.71:69,0,825
chr10	94818670	.	GC	G	183.21	PASS	AB=1.000;AC=31;AF=0.969;AN=32;BaseQRankSum=0.000;DP=31;FS=0.000;HRun=1;HaplotypeScore=9.9564;InbreedingCoeff=0.1702;MQ=52.71;MQ0=0;MQRankSum=0.946;QD=6.54;ReadPosRankSum=0.473;VQSLOD=0.3380;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:3.87:25,4,0	./.	./.	./.	1/1:0,1:1:1.25:3,1,0	./.	1/1:2,0:2:1.89:22,2,0	0/1:1,0:1:0:0,0,0	./.	./.	1/1:1,0:1:0.47:1,0,0	./.	1/1:2,0:2:2.69:8,3,0	1/1:0,3:3:2.49:5,2,0	1/1:0,2:2:1.25:3,1,0	1/1:0,1:1:2.97:20,3,0	./.	./.	1/1:2,1:3:5.49:33,5,0	1/1:1,0:1:2.99:24,3,0	1/1:1,0:1:3:27,3,0	./.	1/1:3,0:3:3.89:29,4,0	./.	1/1:1,0:1:3:27,3,0	1/1:0,2:2:3.47:27,3,0	1/1:0,2:2:1.25:3,1,0	./.
chr10	94820416	.	G	GACACAC	3863.17	PASS	AB=0.885;AC=32;AF=0.571;AN=56;BaseQRankSum=6.448;DP=684;FS=1.954;HRun=0;HaplotypeScore=172.5145;InbreedingCoeff=0.1984;MQ=58.30;MQ0=20;MQRankSum=-1.501;QD=8.88;ReadPosRankSum=0.172;VQSLOD=2.5776;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:42.97:0,43,608	0/1:4,0:9:9.19:29,0,9	0/0:39,0:18:16.43:0,16,190	0/0:51,0:14:1.72:0,2,99	0/1:9,0:14:21.03:21,0,34	1/1:11,8:20:5.64:108,6,0	1/1:32,0:32:36.61:355,37,0	0/0:30,0:27:8.81:0,9,640	1/1:10,0:11:5.71:36,6,0	0/0:27,0:27:68.87:0,69,1093	0/0:24,0:23:36.10:0,36,657	1/1:8,12:24:20.33:492,20,0	1/1:5,8:14:14.53:453,15,0	1/1:4,14:20:17.11:524,17,0	1/1:7,0:13:21.70:137,22,0	1/1:10,0:14:16.58:92,17,0	0/0:36,0:36:64.07:0,64,1700	0/1:9,0:27:48.06:137,0,48	0/1:25,0:21:99:154,0,212	0/1:14,0:14:81.90:82,0,156	0/1:38,0:37:83.79:84,0,335	1/1:25,1:30:22.73:275,23,0	1/1:20,0:20:27.42:360,27,0	1/1:12,0:23:14.18:145,14,0	0/1:14,0:16:29.72:52,0,30	0/1:27,0:26:74.05:74,0,471	0/1:23,0:23:99:164,0,257	0/1:18,0:18:90.70:91,0,131
chr10	94820424	.	CAG	C	3450.99	PASS	AB=0.948;AC=30;AF=0.536;AN=56;BaseQRankSum=-3.768;DP=681;FS=0.375;HRun=0;HaplotypeScore=133.6936;InbreedingCoeff=-0.1233;MQ=55.98;MQ0=21;MQRankSum=3.262;QD=6.14;ReadPosRankSum=-7.337;VQSLOD=0.7626;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:28,13:40:43.67:44,0,360	0/1:10,0:10:8.56:79,0,9	0/0:30,0:12:6.12:0,6,112	0/1:49,0:13:1.90:2,0,90	0/1:15,0:14:15.12:78,0,15	1/1:19,0:19:6.78:110,7,0	1/1:35,0:35:65.67:535,66,0	0/1:21,12:30:99:344,0,315	1/1:13,0:13:21.63:186,22,0	0/1:30,0:30:91.49:91,0,192	0/1:24,0:23:55.70:56,0,94	0/1:24,1:24:7.75:8,0,28	0/1:15,0:15:21.23:72,0,21	0/0:19,0:18:14.64:0,15,52	0/1:10,0:10:7.66:36,0,8	1/1:13,0:13:17.76:154,18,0	0/0:37,0:37:37.21:0,37,1399	0/1:28,0:27:21.52:125,0,22	0/1:24,1:20:82.44:82,0,299	0/0:15,0:15:18.89:0,19,184	0/1:38,3:40:99:268,0,380	1/1:26,1:27:27.82:307,28,0	1/1:19,0:19:24.93:264,25,0	1/1:23,0:23:12.54:115,13,0	0/1:17,0:17:44.15:78,0,44	0/1:23,1:23:96.91:97,0,426	0/1:22,4:26:99:321,0,246	0/0:17,1:18:17.88:0,18,175
chr10	94820426	.	G	GACACACAC	6614.03	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-0.299;DP=684;FS=6.082;HRun=0;HaplotypeScore=185.7194;InbreedingCoeff=0.0795;MQ=55.36;MQ0=20;MQRankSum=-0.947;QD=10.25;ReadPosRankSum=-4.730;VQSLOD=2.1223;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:39:9.03:159,9,0	0/1:10,0:10:5.92:61,0,6	1/1:24,0:9:2.22:7,2,0	0/1:46,0:13:5.96:6,0,29	0/1:14,0:13:16.21:38,0,16	1/1:20,0:20:6.38:95,6,0	1/1:33,0:33:34.55:317,35,0	1/1:32,0:29:43.11:433,43,0	1/1:14,0:14:9.95:71,10,0	0/1:11,0:29:65.34:65,0,325	0/1:11,0:22:18.39:18,0,309	1/1:24,0:23:17.10:322,17,0	1/1:14,0:14:24.92:463,25,0	1/1:19,0:18:17.27:377,17,0	1/1:11,0:11:4.71:87,5,0	1/1:13,0:13:14.58:94,15,0	0/0:37,0:39:37.03:0,37,1682	0/1:26,0:25:36.99:37,0,96	1/1:23,1:20:12.55:502,13,0	1/1:7,8:20:9.03:286,9,0	1/1:40,0:40:47.69:716,48,0	1/1:28,0:28:19.19:222,19,0	1/1:19,0:19:23.58:272,24,0	1/1:24,0:24:10.28:150,10,0	0/1:17,0:17:6.11:45,0,6	1/1:14,9:29:41.92:613,42,0	1/1:21,4:25:50.67:969,51,0	1/1:7,11:23:6.02:189,6,0
chr10	94820765	.	GT	G	6044.22	PASS	AB=0.565;AC=45;AF=0.804;AN=56;BaseQRankSum=2.355;DP=516;FS=2.792;HRun=12;HaplotypeScore=67.0914;InbreedingCoeff=0.6272;MQ=80.35;MQ0=1;MQRankSum=-1.340;QD=15.38;ReadPosRankSum=4.728;VQSLOD=5.8017;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:34:57.99:0,58,759	1/1:2,5:7:8.95:70,9,0	0/0:41,0:28:39.81:0,40,381	0/0:23,0:14:22.31:0,22,153	1/1:4,10:14:3.68:204,4,0	0/1:2,14:16:11.79:237,0,12	1/1:1,15:17:38.80:297,39,0	1/1:5,20:25:17.96:381,18,0	1/1:2,15:17:35.86:279,36,0	1/1:2,0:16:30.79:90,31,0	1/1:1,0:13:19.17:53,19,0	1/1:1,8:9:17.92:139,18,0	1/1:3,16:20:40.57:306,41,0	1/1:3,12:15:29.87:232,30,0	0/1:4,11:15:3.55:159,0,4	1/1:1,12:14:28.91:215,29,0	0/0:24,0:24:46.95:0,47,543	1/1:1,22:24:49.87:396,50,0	1/1:5,20:26:63.76:469,64,0	1/1:5,12:18:43.82:325,44,0	1/1:2,2:4:2.97:23,3,0	1/1:3,13:16:35.86:279,36,0	1/1:1,17:18:44.82:348,45,0	1/1:1,13:14:38.85:302,39,0	1/1:5,23:28:59.76:464,60,0	1/1:1,16:18:49.85:377,50,0	1/1:5,17:22:38.84:302,39,0	0/1:2,5:7:12.48:98,0,12
chr10	94821506	.	T	TGG	891.82	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=3.492;DP=616;FS=11.093;HRun=1;HaplotypeScore=103.9881;InbreedingCoeff=0.7873;MQ=70.77;MQ0=0;MQRankSum=-0.880;QD=12.22;ReadPosRankSum=-1.239;VQSLOD=-0.7055;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:1.42:1,0,175	0/0:1,0:1:3.01:0,3,46	0/0:24,0:24:57.96:0,58,815	0/0:23,0:19:53.87:0,54,660	0/0:22,0:22:60.12:0,60,824	0/0:19,0:19:53.77:0,54,739	0/0:24,0:24:63.18:0,63,909	0/0:32,0:32:90.19:0,90,1179	0/0:24,0:23:69.11:0,69,969	1/1:5,15:20:41.76:508,42,0	1/1:1,17:18:30.10:504,30,0	0/0:26,0:25:72.18:0,72,1009	0/0:25,0:25:75.23:0,75,1110	0/0:12,0:12:33.07:0,33,438	0/0:18,0:18:54.14:0,54,776	0/0:19,0:19:54.18:0,54,817	0/0:28,0:28:81.18:0,81,1160	0/0:11,0:11:13.19:0,13,404	0/0:28,0:28:81.11:0,81,1097	0/0:22,0:22:63.08:0,63,865	0/0:24,0:24:72.22:0,72,1055	0/0:25,0:25:75.16:0,75,1090	0/0:18,0:18:51.06:0,51,715	0/0:21,0:21:60.12:0,60,807	0/0:20,0:20:57.14:0,57,803	0/0:29,0:28:78.51:0,79,1152	0/0:23,0:23:60.16:0,60,865	0/0:25,0:25:75.24:0,75,1113
chr10	94821508	.	T	TGG	1762.18	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-0.976;DP=608;FS=12.012;HRun=6;HaplotypeScore=99.3631;InbreedingCoeff=0.9396;MQ=70.76;MQ0=0;MQRankSum=-1.672;QD=26.30;ReadPosRankSum=-0.568;VQSLOD=1.7123;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,28:34:54.18:913,54,0	0/0:1,0:1:3.01:0,3,37	0/0:23,0:23:42.97:0,43,526	0/0:22,0:19:28.96:0,29,465	0/0:23,0:23:66.11:0,66,726	0/0:20,0:20:57.08:0,57,638	0/0:23,0:23:57.13:0,57,648	0/0:31,0:31:74.66:0,75,847	0/0:25,0:24:60.12:0,60,690	1/1:17,0:17:39.03:494,39,0	1/1:16,0:16:30.10:498,30,0	0/0:26,0:25:69.16:0,69,791	0/0:26,0:26:69.06:0,69,804	0/0:13,0:13:30.05:0,30,328	0/0:18,0:18:51.13:0,51,596	0/0:19,0:19:51.16:0,51,620	0/0:27,0:27:78.10:0,78,880	0/0:10,0:10:26.82:0,27,303	0/0:27,0:27:62.71:0,63,691	0/0:22,0:22:63.05:0,63,706	0/0:25,0:25:66.17:0,66,780	0/0:25,0:25:69.17:0,69,811	0/0:17,0:17:42.09:0,42,496	0/0:20,0:20:33.94:0,34,555	0/0:19,0:19:57.14:0,57,657	0/0:31,0:30:57.25:0,57,930	0/0:23,0:23:54.11:0,54,619	0/0:25,0:25:66.18:0,66,789
chr10	94821970	.	GA	G	15933.63	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=5.122;DP=556;FS=7.240;HRun=3;HaplotypeScore=60.5524;InbreedingCoeff=0.9755;MQ=94.23;MQ0=0;MQRankSum=-8.712;QD=33.06;ReadPosRankSum=5.522;VQSLOD=4.9191;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:72.23:891,72,0	1/1:0,6:6:13.32:183,13,0	0/0:27,0:27:75.24:0,75,1038	0/0:24,0:24:42.65:0,43,806	1/1:0,16:16:48.15:594,48,0	1/1:1,31:32:84.26:1040,84,0	1/1:0,22:22:57.18:706,57,0	1/1:3,20:23:60.15:707,60,0	1/1:1,18:19:48.15:595,48,0	1/1:1,23:24:69.19:840,69,0	1/1:0,15:15:36.11:446,36,0	1/1:0,9:9:24.08:297,24,0	1/1:0,20:20:57.18:706,57,0	1/1:1,21:22:54.17:669,54,0	1/1:1,11:12:27.08:335,27,0	1/1:0,19:19:54.17:669,54,0	0/0:23,0:23:63.18:0,63,870	1/1:1,19:20:11:589,11,0	1/1:2,28:30:79.44:921,79,0	1/1:0,24:24:69.16:836,69,0	1/1:0,7:7:21.07:260,21,0	1/1:1,17:18:51.16:627,51,0	1/1:2,19:21:54.17:669,54,0	1/1:0,18:18:48.15:595,48,0	1/1:0,18:18:48.15:595,48,0	1/1:0,24:24:72.19:864,72,0	1/1:0,28:28:78.25:966,78,0	1/1:0,9:9:27.08:334,27,0
chr10	94822423	.	T	TC	2001.22	PASS	AB=0.631;AC=36;AF=0.643;AN=56;BaseQRankSum=-4.469;DP=458;FS=5.350;HRun=10;HaplotypeScore=70.4738;InbreedingCoeff=0.3160;MQ=78.56;MQ0=2;MQRankSum=-2.113;QD=7.15;ReadPosRankSum=-0.253;VQSLOD=1.7574;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:40:44.31:0,44,129	1/1:2,2:4:3.01:32,3,0	0/0:43,0:29:38.91:0,39,403	0/0:33,0:19:18.62:0,19,258	0/1:7,10:18:19.44:186,0,19	0/1:6,8:14:22.20:163,0,22	0/1:6,7:14:34.37:63,0,34	0/1:12,5:17:1.35:78,0,1	0/1:5,10:16:12.63:74,0,13	0/0:16,0:16:29.69:0,30,233	0/0:14,1:15:32.84:0,33,262	1/1:4,1:14:11.72:86,12,0	1/1:2,10:12:9.02:96,9,0	1/1:6,6:13:11.86:110,12,0	1/1:3,9:13:9.02:96,9,0	0/1:3,10:13:2.26:141,0,2	0/0:30,0:30:71.89:0,72,588	0/1:8,14:22:60.62:220,0,61	1/1:6,1:11:12.30:100,12,0	1/1:7,0:11:2.95:20,3,0	1/1:9,3:19:20.22:135,20,0	1/1:1,3:4:9.02:96,9,0	1/1:3,7:10:6.02:64,6,0	1/1:6,10:16:14.84:149,15,0	0/1:3,5:8:15.57:55,0,16	1/1:5,0:8:2.84:14,3,0	1/1:11,0:14:13.74:78,14,0	1/1:3,6:9:12.03:128,12,0
chr10	94824388	.	TA	T	1112.40	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.174;DP=703;FS=15.673;HRun=2;HaplotypeScore=67.7150;InbreedingCoeff=0.9964;MQ=74.40;MQ0=0;MQRankSum=-3.471;QD=29.27;ReadPosRankSum=1.705;VQSLOD=2.0622;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,35:38:93.30:1207,93,0	0/0:11,0:11:33.11:0,33,493	0/0:30,0:30:84.24:0,84,1144	0/0:26,0:25:66.22:0,66,974	0/0:19,0:19:54.17:0,54,787	0/0:19,0:19:57.18:0,57,835	0/0:41,0:41:99:0,123,1777	0/0:23,0:23:63.21:0,63,945	0/0:27,0:27:81.27:0,81,1214	0/0:30,0:30:84.27:0,84,1218	0/0:8,0:8:24.07:0,24,341	0/0:30,0:30:90.30:0,90,1331	0/0:28,0:28:81.27:0,81,1212	0/0:25,0:25:72.24:0,72,1078	0/0:31,0:31:93.29:0,93,1353	0/0:26,0:26:78.25:0,78,1149	0/0:58,0:58:99:0,175,2557	0/0:23,0:23:69.23:0,69,1034	0/0:26,0:26:78.22:0,78,1104	0/0:16,0:16:48.16:0,48,719	0/0:34,0:34:99:0,102,1524	0/0:11,0:11:33.11:0,33,494	0/0:14,0:14:42.14:0,42,627	0/0:39,0:39:99:0,117,1753	0/0:21,0:21:63.21:0,63,944	0/0:18,0:18:54.17:0,54,767	0/0:22,0:22:66.22:0,66,989	0/0:9,0:9:27.09:0,27,403
chr10	94825274	.	AGAGG	A	337.57	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.553;DP=390;FS=18.330;HRun=0;HaplotypeScore=64.6373;InbreedingCoeff=0.4367;MQ=70.09;MQ0=31;MQRankSum=-1.427;QD=11.25;ReadPosRankSum=1.463;VQSLOD=1.0394;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,7:14:33.02:430,33,0	0/0:4,0:4:8.58:0,9,58	0/0:55,0:16:3.67:0,4,221	0/0:56,0:12:7.03:0,7,106	0/0:11,0:11:21:0,21,209	0/0:10,0:9:11.99:0,12,149	0/0:23,0:22:27.29:0,27,316	0/0:7,0:6:10.20:0,10,70	0/0:6,0:6:11.43:0,11,78	0/0:16,0:16:32.93:0,33,240	0/0:5,0:5:8.51:0,9,52	0/0:16,0:16:28.18:0,28,249	0/0:15,0:14:27.92:0,28,319	0/0:7,0:7:0.98:0,1,22	0/0:12,0:11:8.59:0,9,59	0/0:15,0:15:27.60:0,28,212	0/0:14,0:12:17.95:0,18,144	0/0:8,0:8:9.44:0,9,72	0/0:10,0:10:17.80:0,18,187	0/0:4,0:4:5.97:0,6,56	1/1:14,0:10:0.73:1,1,0	0/0:7,0:7:9.86:0,10,75	0/0:6,0:5:0:0,0,0	0/0:18,0:18:9.56:0,10,81	0/0:8,0:8:5.22:0,5,33	0/0:13,0:13:15.52:0,16,188	0/0:9,0:8:11.18:0,11,75	0/0:4,0:4:2.98:0,3,21
chr10	94825284	.	GGGGGA	G	563.19	PASS	AB=0.966;AC=28;AF=0.500;AN=56;BaseQRankSum=1.514;DP=330;FS=0.765;HRun=0;HaplotypeScore=53.9922;InbreedingCoeff=0.0930;MQ=63.24;MQ0=43;MQRankSum=-1.146;QD=2.57;ReadPosRankSum=2.675;VQSLOD=0.7684;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:11:0.33:36,0,0	0/0:5,0:4:5.56:0,6,30	0/1:54,0:13:6.11:6,0,182	0/0:57,0:10:9.22:0,9,178	0/0:7,0:7:8.93:0,9,63	0/1:13,1:13:49.01:65,0,49	0/1:12,7:17:48.44:126,0,48	1/1:8,0:4:8.15:66,8,0	1/1:4,0:4:4.78:47,5,0	0/0:10,0:10:12.19:0,12,45	0/0:5,0:5:5.36:0,5,24	0/1:10,0:10:13.69:72,0,14	0/1:11,0:10:5.90:6,0,82	1/1:6,0:6:8.84:58,9,0	1/1:7,0:6:2.96:19,3,0	0/1:10,0:9:6.90:7,0,55	0/0:11,0:9:18.04:0,18,264	1/1:6,0:6:0.45:11,0,0	0/1:9,0:8:65.17:68,0,65	0/1:6,0:6:15.29:15,0,17	1/1:11,0:7:0.05:0,0,0	0/0:6,0:5:5.12:0,5,23	0/0:8,0:7:4.52:0,5,24	0/1:13,0:12:8.40:32,0,8	1/1:8,0:8:2.13:9,2,0	1/1:5,0:3:7.16:44,7,0	1/1:5,0:4:5.30:33,5,0	0/0:2,0:2:2.98:0,3,21
chr10	94825286	.	GGGA	G	1226.62	PASS	AB=0.943;AC=35;AF=0.625;AN=56;BaseQRankSum=-1.268;DP=316;FS=0.000;HRun=0;HaplotypeScore=44.7485;InbreedingCoeff=0.4022;MQ=56.50;MQ0=45;MQRankSum=-0.004;QD=7.62;ReadPosRankSum=1.621;VQSLOD=2.0408;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:11:7.68:8,0,8	0/0:5,0:4:0.88:0,1,2	0/0:51,0:10:6.11:0,6,133	0/0:55,0:8:8.25:0,8,101	0/0:5,1:6:0:0,0,0	1/1:12,0:11:13.23:108,13,0	1/1:13,2:13:12.04:167,12,0	1/1:8,0:4:9.43:68,9,0	1/1:3,1:4:8.97:117,9,0	1/1:9,0:9:9.52:133,10,0	1/1:5,0:5:0.94:2,1,0	1/1:7,1:8:11.92:135,12,0	1/1:10,0:9:5.42:23,5,0	1/1:5,0:5:8.95:66,9,0	1/1:8,0:7:2.99:24,3,0	1/1:8,1:8:9.96:62,10,0	0/0:13,0:11:17.50:0,17,152	1/1:6,0:6:6.99:30,7,0	0/1:7,1:8:20.71:152,0,21	1/1:4,0:5:3.01:47,3,0	1/1:10,1:7:0.30:0,0,0	0/0:2,4:5:3.26:0,3,10	0/0:8,0:7:1.72:0,2,4	0/1:12,1:12:4.67:81,0,5	0/0:6,2:8:0:0,0,0	1/1:4,2:3:9.01:98,9,0	1/1:4,1:4:3.31:48,3,0	0/0:2,1:2:1.25:0,1,3
chr10	94825288	.	GA	G	717.06	PASS	AB=0.915;AC=38;AF=0.731;AN=52;BaseQRankSum=-1.321;DP=294;FS=1.125;HRun=2;HaplotypeScore=41.1310;InbreedingCoeff=0.4250;MQ=51.14;MQ0=46;MQRankSum=-0.100;QD=4.81;ReadPosRankSum=1.004;VQSLOD=0.6754;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:11:7.92:0,8,33	1/1:4,0:3:2.80:13,3,0	0/0:47,0:8:11.19:0,11,103	0/0:54,0:7:8.29:0,8,66	./.	1/1:10,2:11:11.77:86,12,0	1/1:12,3:13:11.96:96,12,0	1/1:8,0:4:8.96:68,9,0	1/1:2,1:3:6:51,6,0	0/1:8,0:8:13.60:14,0,14	0/1:5,0:5:0.16:0,0,0	1/1:6,1:7:8.86:59,9,0	1/1:5,1:5:5.49:23,5,0	1/1:4,0:4:8.76:57,9,0	1/1:9,0:7:2.74:12,3,0	1/1:8,0:7:8.83:57,9,0	0/0:12,0:10:6.28:0,6,81	1/1:6,0:6:8.31:44,8,0	1/1:8,1:8:10.53:120,11,0	1/1:1,4:5:2.99:23,3,0	0/0:8,1:5:2.98:0,3,22	./.	0/1:6,1:6:0:0,0,0	0/1:8,2:10:4.17:46,0,4	1/1:8,0:8:2.03:6,2,0	1/1:6,0:3:6.34:40,6,0	1/1:3,2:4:5.03:30,5,0	1/1:3,0:2:2.92:17,3,0
chr10	94825289	.	A	AG	1504.91	PASS	AB=0.913;AC=40;AF=0.714;AN=56;BaseQRankSum=0.513;DP=380;FS=0.983;HRun=12;HaplotypeScore=85.5137;InbreedingCoeff=0.4959;MQ=44.89;MQ0=49;MQRankSum=-3.624;QD=6.81;ReadPosRankSum=0.352;VQSLOD=2.5155;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:7.88:0,8,33	1/1:3,1:4:6.02:79,6,0	0/0:46,0:7:11.19:0,11,103	0/0:53,0:7:8.29:0,8,66	0/1:7,0:10:0:0,0,1	1/1:12,0:10:4.29:36,4,0	1/1:16,0:14:11.33:76,11,0	1/1:14,1:11:27.06:320,27,0	1/1:7,1:8:2.57:46,3,0	1/1:11,1:12:13.04:176,13,0	0/1:8,0:8:0.20:0,0,1	1/1:10,0:10:10.55:58,11,0	1/1:7,0:6:2.74:12,3,0	1/1:6,0:6:3.81:17,4,0	1/1:7,0:11:2.98:21,3,0	1/1:5,6:11:12.04:154,12,0	0/0:13,0:10:17.67:0,18,162	1/1:4,0:7:11.86:108,12,0	1/1:9,0:8:13.54:153,14,0	1/1:13,0:13:6.47:55,6,0	0/0:16,0:12:3.45:0,3,23	0/0:8,0:7:0.88:0,1,2	0/1:10,1:10:0:0,0,0	0/1:13,0:12:23.04:32,0,23	1/1:5,4:9:2.99:24,3,0	1/1:13,0:9:18.76:171,19,0	1/1:7,0:6:11.66:83,12,0	1/1:2,0:2:3.01:36,3,0
chr10	94825325	.	ATGTGTGTGTGTGTGTGTGTGTGTGTG	A	3456.70	PASS	AB=0.872;AC=36;AF=0.692;AN=52;BaseQRankSum=1.901;DP=388;FS=26.170;HRun=0;HaplotypeScore=174.5546;InbreedingCoeff=0.2151;MQ=31.10;MQ0=58;MQRankSum=-1.489;QD=12.17;ReadPosRankSum=0.493;VQSLOD=0.7966;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:0.06:0,0,0	1/1:6,1:5:12:280,12,0	./.	./.	1/1:13,1:10:0.47:2,0,0	1/1:12,2:13:8.92:276,9,0	0/0:23,0:17:2.48:0,2,237	0/0:20,0:19:20.44:0,20,318	1/1:9,2:11:5.26:240,5,0	0/1:21,0:19:43.36:308,0,43	0/1:10,0:9:0:1,0,0	1/1:4,6:10:3.01:38,3,0	1/1:5,5:10:6.02:404,6,0	1/1:7,1:11:9.92:436,10,0	1/1:8,3:9:9.02:101,9,0	1/1:15,1:12:8.94:209,9,0	0/0:18,0:16:21.07:0,21,1940	0/1:8,0:6:1.54:40,0,2	0/1:13,0:14:99:267,0,405	0/1:12,0:15:8.06:109,0,8	0/0:21,0:26:9.97:0,10,278	1/1:7,3:8:3.48:38,3,0	1/1:3,6:9:9.76:91,10,0	1/1:13,9:21:0.47:1,0,0	1/1:7,2:10:8.99:98,9,0	0/1:13,0:13:66.85:268,0,67	0/1:5,0:9:20.76:134,0,21	1/1:6,0:3:3.01:114,3,0
chr10	94825945	.	T	TGTGCCC	7437.48	PASS	AB=0.864;AC=38;AF=0.679;AN=56;BaseQRankSum=-0.178;DP=704;FS=16.086;HRun=0;HaplotypeScore=288.0980;InbreedingCoeff=-0.0112;MQ=40.29;MQ0=11;MQRankSum=-2.270;QD=12.85;ReadPosRankSum=-2.232;VQSLOD=2.1838;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:25:3.43:332,0,3	1/1:7,1:8:23.92:387,24,0	0/0:36,0:22:48.13:0,48,969	0/0:44,0:22:49.60:0,50,918	1/1:18,0:18:9.10:97,9,0	1/1:5,12:19:16.89:307,17,0	1/1:15,4:19:22.65:394,23,0	0/1:29,0:27:59.62:469,0,60	0/1:13,6:19:5.45:653,0,5	0/1:32,0:30:99:372,0,236	1/1:25,0:25:14.39:213,14,0	0/1:18,4:22:67.19:340,0,67	0/1:9,16:25:36.95:362,0,37	1/1:17,3:21:12.39:226,12,0	1/1:17,1:19:15.67:301,16,0	1/1:14,2:16:26.96:342,27,0	0/0:44,0:43:99:0,121,2748	0/1:14,2:16:72.12:457,0,72	0/1:22,3:22:59.93:525,0,60	1/1:25,4:29:14.41:189,14,0	1/1:44,0:44:22.31:249,22,0	0/1:18,18:35:7.86:16,0,8	1/1:13,7:21:0.42:15,0,0	1/1:21,1:22:18.88:230,19,0	1/1:16,15:32:0.06:143,0,0	0/1:21,0:21:66.54:284,0,67	0/1:19,1:19:50.69:264,0,51	0/1:8,2:10:67.88:272,0,68
chr10	94825947	.	T	TGCCC	5623.28	PASS	AB=0.966;AC=38;AF=0.679;AN=56;BaseQRankSum=-0.326;DP=699;FS=15.698;HRun=0;HaplotypeScore=278.3037;InbreedingCoeff=0.0037;MQ=39.20;MQ0=15;MQRankSum=-2.444;QD=9.80;ReadPosRankSum=-2.305;VQSLOD=2.5018;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,7:24:10.41:377,0,10	1/1:7,0:8:21.46:304,21,0	0/0:35,0:19:40.33:0,40,863	0/0:45,0:20:47.07:0,47,836	1/1:17,1:18:8.75:72,9,0	1/1:20,0:20:6.91:146,7,0	1/1:21,0:19:19.68:249,20,0	0/1:29,0:27:75.18:391,0,75	1/1:19,0:19:22.11:497,22,0	0/1:35,0:32:99:185,0,308	1/1:24,1:25:16.13:194,16,0	0/1:23,0:23:26.51:231,0,27	0/1:24,0:23:51.62:175,0,52	1/1:21,0:21:16.33:195,16,0	1/1:18,0:18:3.70:253,4,0	1/1:14,1:15:26.46:326,26,0	0/0:45,0:44:99:0,123,2410	0/1:16,0:16:22.95:303,0,23	0/1:23,2:22:99:448,0,110	1/1:24,5:29:8.67:134,9,0	1/1:41,1:41:21.27:180,21,0	1/1:34,1:34:10.04:71,10,0	0/1:19,0:20:12.54:13,0,16	1/1:21,0:21:16.59:225,17,0	0/1:32,1:33:1.46:97,0,1	0/1:20,0:18:95.79:151,0,96	0/1:20,0:19:38.20:210,0,38	0/1:11,0:11:50.78:196,0,51
chr10	94825948	.	G	GCA	380.03	PASS	AB=0.968;AC=14;AF=0.250;AN=56;BaseQRankSum=9.009;DP=682;FS=7.470;HRun=0;HaplotypeScore=272.8376;InbreedingCoeff=-0.2321;MQ=37.75;MQ0=15;MQRankSum=-5.568;QD=1.38;ReadPosRankSum=2.076;VQSLOD=1.4080;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,1:24:15.49:30,0,15	0/1:8,0:8:24.22:24,0,48	0/0:32,0:17:48.61:0,49,729	0/0:44,0:19:50.82:0,51,717	0/0:18,0:18:8.37:0,8,60	0/1:17,1:19:47.28:54,0,47	0/1:18,2:19:23.57:26,0,24	0/0:27,0:25:40.65:0,41,317	0/1:19,0:19:26.07:26,0,46	0/1:34,0:31:10.14:10,0,390	0/0:23,0:25:8.70:0,9,58	0/1:22,0:22:1.63:2,0,70	0/1:20,3:23:71.76:108,0,72	0/0:18,0:20:3.52:0,4,23	0/0:17,0:18:3.22:0,3,65	0/0:15,0:15:1.39:0,1,23	0/0:45,0:44:99:0,124,1976	0/1:16,0:16:42:42,0,44	0/1:25,0:22:19.11:19,0,199	0/0:28,1:29:3.87:0,4,46	0/0:40,0:40:14.43:0,14,110	1/1:28,5:32:4.17:46,4,0	0/0:17,1:19:0.37:0,0,2	0/0:19,1:20:6.28:0,6,15	0/0:31,0:31:4.28:0,4,50	0/1:15,2:17:99:103,0,189	0/0:19,1:19:8.53:0,9,105	0/1:11,0:11:32.35:32,0,35
chr10	94825950	.	C	CATG	633.37	PASS	AB=0.974;AC=21;AF=0.375;AN=56;BaseQRankSum=8.578;DP=711;FS=25.275;HRun=0;HaplotypeScore=310.3873;InbreedingCoeff=-0.2906;MQ=37.08;MQ0=19;MQRankSum=-5.048;QD=1.48;ReadPosRankSum=4.206;VQSLOD=1.2269;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:29:4.13:128,4,0	0/1:9,0:9:14.28:14,0,68	0/0:35,0:16:45.57:0,46,687	0/0:44,0:18:44.32:0,44,715	0/0:18,1:20:9.40:0,9,109	0/1:17,0:17:49.81:54,0,50	0/1:21,0:20:22.44:22,0,30	0/0:29,0:27:22.52:0,23,401	0/1:20,0:21:66.34:66,0,70	0/1:34,0:32:57.62:58,0,443	0/0:24,1:25:8.57:0,9,100	0/1:21,0:21:20.74:21,0,136	0/1:22,0:23:69.17:99,0,69	0/1:20,0:20:16.13:16,0,30	0/1:21,0:21:4.40:4,0,99	0/1:16,0:16:19.26:19,0,30	0/0:45,0:44:99:0,123,2273	0/1:14,0:15:55.44:55,0,111	0/1:19,0:21:91.47:91,0,257	0/1:25,3:30:8.21:8,0,47	0/0:39,0:39:22.14:0,22,239	1/1:32,1:34:5.07:23,5,0	0/1:21,1:22:0.45:1,0,0	0/0:22,0:22:1.39:0,1,3	0/1:34,1:35:17.45:24,0,17	0/1:22,0:20:42.48:42,0,232	0/0:17,1:20:11.50:0,11,260	0/1:11,0:11:18.33:43,0,18
chr10	94825954	.	GTGTGTA	G	2210.93	PASS	AB=0.990;AC=30;AF=0.536;AN=56;BaseQRankSum=5.788;DP=754;FS=1.631;HRun=0;HaplotypeScore=349.4742;InbreedingCoeff=-0.1226;MQ=34.35;MQ0=23;MQRankSum=-5.320;QD=4.06;ReadPosRankSum=-1.015;VQSLOD=1.3675;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,5:30:41.60:214,0,42	1/1:11,0:11:13.69:125,14,0	0/0:34,0:12:23.95:0,24,524	0/0:41,0:14:22.80:0,23,530	0/0:23,0:23:1.80:0,2,10	0/1:22,0:22:35.61:65,0,36	0/1:32,0:30:14.81:70,0,15	0/1:27,0:25:7.02:229,0,7	0/1:24,0:24:72.63:75,0,73	0/1:34,0:31:37.09:348,0,37	1/1:25,0:25:5.28:48,5,0	1/1:23,0:24:8.03:146,8,0	0/1:26,0:25:7.85:134,0,8	1/1:21,0:21:5.50:34,6,0	0/1:21,0:21:0.14:54,0,0	1/1:18,0:18:2.12:57,2,0	0/0:49,0:48:99:0,135,3801	0/1:17,0:17:15.27:35,0,15	0/1:20,0:18:90.63:160,0,91	0/1:32,0:32:18.29:45,0,18	1/1:40,0:39:5.46:38,5,0	0/0:37,0:36:6.23:0,6,63	1/1:21,0:20:3.89:51,4,0	0/0:25,0:26:0.86:0,1,3	0/1:38,0:38:13.35:48,0,13	0/1:25,0:23:33.02:269,0,33	0/1:23,0:22:47.76:48,0,175	1/1:11,0:11:15.69:80,16,0
chr10	94825956	.	GTGTA	G	2176.64	PASS	AB=0.927;AC=35;AF=0.625;AN=56;BaseQRankSum=5.365;DP=754;FS=3.583;HRun=0;HaplotypeScore=352.8172;InbreedingCoeff=0.0256;MQ=33.36;MQ0=23;MQRankSum=-4.821;QD=3.84;ReadPosRankSum=-1.500;VQSLOD=1.4294;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:30:17.55:86,0,18	1/1:10,0:10:12.84:81,13,0	0/0:32,0:10:23.91:0,24,443	0/0:41,0:13:20.79:0,21,386	1/1:20,2:22:2.74:24,3,0	0/1:21,2:23:13.15:48,0,13	0/1:32,2:32:56.09:57,0,56	1/1:27,1:26:25.50:257,26,0	0/1:25,0:25:41.09:94,0,41	1/1:30,6:35:33.05:438,33,0	1/1:25,1:26:5.51:49,6,0	1/1:21,4:25:19.25:178,19,0	0/1:23,1:23:17.57:90,0,18	1/1:17,4:22:5.40:66,5,0	0/1:15,3:19:5.19:44,0,5	1/1:16,1:17:1.13:43,1,0	0/0:49,0:48:99:0,135,3007	0/1:8,7:15:44:121,0,44	0/1:19,0:17:77.78:125,0,78	0/1:31,2:33:0.55:29,0,1	1/1:32,3:34:5.20:37,5,0	0/0:37,1:38:1.15:0,1,29	1/1:20,2:21:3.25:37,3,0	0/0:25,1:26:2.23:0,2,5	1/1:35,4:38:4.96:68,5,0	0/1:26,1:25:1.14:248,0,1	0/1:21,1:21:15.52:16,0,128	1/1:10,1:11:6.28:103,6,0
chr10	94825958	.	GTA	G	1916.26	PASS	AB=0.992;AC=43;AF=0.768;AN=56;BaseQRankSum=5.164;DP=749;FS=9.558;HRun=0;HaplotypeScore=347.0205;InbreedingCoeff=0.2900;MQ=34.40;MQ0=24;MQRankSum=-4.120;QD=3.19;ReadPosRankSum=-2.665;VQSLOD=0.5770;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,1:31:5.79:88,6,0	1/1:10,0:10:9.10:59,9,0	0/0:32,0:10:23.91:0,24,345	0/0:41,0:13:19.97:0,20,290	1/1:22,0:22:2.95:24,3,0	0/1:23,0:23:8.50:42,0,9	0/1:36,0:34:12.45:34,0,12	1/1:28,0:26:36.82:282,37,0	0/1:23,0:24:6.93:65,0,7	1/1:35,1:33:54.64:376,55,0	1/1:21,5:26:5.88:50,6,0	1/1:24,0:24:11.96:81,12,0	1/1:24,0:23:13.16:123,13,0	1/1:24,0:24:5.36:52,5,0	1/1:20,0:20:3.44:33,3,0	1/1:14,0:14:1.10:29,1,0	0/0:49,0:48:99:0,113,2127	1/1:15,0:15:3.82:69,4,0	1/1:18,0:16:5.56:118,6,0	1/1:32,1:33:4.04:49,4,0	1/1:33,0:32:1.77:33,2,0	0/1:39,0:38:0.22:0,0,4	1/1:22,0:21:1.09:4,1,0	0/0:26,0:26:1.83:0,2,6	1/1:39,0:38:4.58:41,5,0	1/1:25,1:25:51.30:326,51,0	0/1:22,0:21:9.80:44,0,10	1/1:11,0:11:6.55:49,7,0
chr10	94825959	.	T	TGC	154.84	PASS	AB=0.976;AC=21;AF=0.375;AN=56;BaseQRankSum=5.735;DP=737;FS=21.991;HRun=0;HaplotypeScore=352.3132;InbreedingCoeff=-0.0273;MQ=33.99;MQ0=27;MQRankSum=-3.968;QD=0.39;ReadPosRankSum=0.848;VQSLOD=1.1144;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,1:30:5.53:16,6,0	0/1:8,1:9:21.44:27,0,21	0/0:32,0:10:24.08:0,24,380	0/0:42,0:12:28.58:0,29,401	0/0:19,2:21:2.82:0,3,21	0/1:23,0:23:22.44:22,0,24	0/1:35,1:34:13.89:17,0,14	0/0:26,0:23:29.71:0,30,269	0/1:23,0:23:10.06:10,0,47	0/0:35,0:31:60.27:0,60,374	0/0:26,0:26:5.87:0,6,41	0/0:23,0:23:7.37:0,7,76	0/1:23,0:22:21.05:21,0,97	0/1:23,0:23:3.72:4,0,9	1/1:20,0:20:1.72:10,2,0	0/1:14,0:14:1.13:1,0,8	0/0:48,0:47:99:0,135,2040	0/1:13,0:14:42.03:42,0,45	0/1:18,0:16:20.53:21,0,77	0/0:33,0:33:2.52:0,3,40	0/1:32,0:31:12.01:12,0,14	1/1:39,0:38:3.96:28,4,0	1/1:22,0:21:1.94:18,2,0	0/1:24,0:25:0.23:0,0,0	0/1:39,0:38:0.02:0,0,42	0/0:26,0:25:21.29:0,21,272	0/0:22,0:21:22.13:0,22,150	0/1:10,1:11:54.49:54,0,62
chr10	94825968	.	GTGTGCCCC	G	1442.62	PASS	AB=0.998;AC=21;AF=0.375;AN=56;BaseQRankSum=2.599;DP=773;FS=2.124;HRun=0;HaplotypeScore=409.6770;InbreedingCoeff=-0.2835;MQ=32.67;MQ0=29;MQRankSum=-2.715;QD=3.24;ReadPosRankSum=2.555;VQSLOD=0.8016;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:6.39:0,6,496	1/1:10,0:10:0.32:72,0,0	0/0:36,0:9:16.88:0,17,524	0/0:40,0:5:14.78:0,15,244	0/0:23,0:23:2.95:0,3,38	0/1:25,0:25:49.69:50,0,400	0/1:43,0:40:97.46:97,0,377	0/1:25,0:21:45.84:46,0,589	0/1:25,0:25:95.27:95,0,354	0/1:40,1:36:99:291,0,437	0/0:26,3:29:4:0,4,28	0/1:24,0:24:99:125,0,212	0/1:24,0:23:99:136,0,296	0/1:24,0:23:9.21:9,0,106	0/1:24,0:24:85.20:85,0,93	0/1:13,0:13:66.64:73,0,67	0/0:49,0:48:99:0,135,5332	0/1:14,0:14:99:131,0,278	0/0:21,0:20:21.37:0,21,340	1/1:35,0:35:4.71:46,5,0	0/0:37,0:35:15.21:0,15,242	0/0:39,0:38:17.80:0,18,159	1/1:23,0:22:5.17:28,5,0	0/0:23,0:23:15.03:0,15,105	0/1:36,0:35:41.40:41,0,274	0/1:26,0:25:99:120,0,364	0/1:22,0:21:44.56:45,0,112	0/1:11,0:11:40.65:112,0,41
chr10	94825971	.	TGCCC	T	835.58	PASS	AB=0.874;AC=16;AF=0.286;AN=56;BaseQRankSum=4.073;DP=764;FS=3.864;HRun=0;HaplotypeScore=390.4549;InbreedingCoeff=-0.2633;MQ=32.60;MQ0=29;MQRankSum=-1.187;QD=2.36;ReadPosRankSum=2.600;VQSLOD=1.0780;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,4:29:40.85:0,41,364	0/1:8,2:10:6.08:26,0,6	0/0:38,0:10:24.03:0,24,564	0/0:42,0:6:9.92:0,10,294	0/0:16,6:22:2.70:0,3,20	0/0:20,6:26:9.69:0,10,218	0/1:37,6:40:30.35:30,0,268	0/0:20,0:18:6.36:0,6,477	0/1:20,2:22:6.87:7,0,161	0/1:38,5:39:99:295,0,471	0/0:20,8:28:2.63:0,3,8	0/1:21,3:24:79.81:80,0,158	0/1:22,3:24:72.45:72,0,183	0/1:22,3:24:18.12:18,0,52	0/1:20,4:24:46.80:49,0,47	0/1:9,4:13:16.50:35,0,17	0/0:47,0:46:99:0,135,3624	0/1:11,2:13:93.34:93,0,305	0/0:20,1:20:0.13:0,0,382	0/1:29,5:34:2.56:3,0,4	0/0:36,0:34:15.15:0,15,145	0/0:29,10:39:16.90:0,17,115	1/1:18,4:21:5.22:25,5,0	0/0:23,1:24:14.99:0,15,72	0/0:29,7:35:0.07:0,0,138	0/1:22,3:24:99:109,0,299	0/1:18,3:20:35.13:35,0,74	0/1:9,1:10:67.13:106,0,67
chr10	94825975	.	CCTGTGTGT	C	2392.53	PASS	AB=0.943;AC=22;AF=0.393;AN=56;BaseQRankSum=1.802;DP=762;FS=4.627;HRun=0;HaplotypeScore=407.4407;InbreedingCoeff=-0.4454;MQ=33.75;MQ0=29;MQRankSum=-1.814;QD=4.68;ReadPosRankSum=-2.164;VQSLOD=0.1152;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:29:14.04:14,0,578	0/1:11,0:11:22.99:23,0,158	0/0:44,0:10:30.01:0,30,678	0/0:43,0:7:17.33:0,17,199	0/0:18,2:20:2.26:0,2,41	0/1:25,1:26:50.20:50,0,606	0/1:42,0:39:99:133,0,544	0/0:19,0:17:40.06:0,40,1054	0/1:21,1:22:99:125,0,623	0/1:38,6:40:99:558,0,1366	1/1:27,1:28:1.58:19,2,0	0/1:19,4:23:99:243,0,412	0/1:27,0:26:99:224,0,514	0/1:23,1:23:22.72:23,0,65	0/1:23,2:25:99:108,0,103	0/1:12,1:13:99:107,0,149	0/0:46,0:45:99:0,135,5600	0/1:11,1:12:99:153,0,502	0/0:21,0:21:16.52:0,17,823	0/1:31,2:34:33.38:75,0,33	0/0:35,0:31:14.49:0,14,309	0/1:38,0:38:73.09:73,0,149	1/1:19,1:20:2.99:77,3,0	0/0:21,1:22:10.79:0,11,94	0/1:33,4:36:99:157,0,343	0/1:29,0:28:99:225,0,985	0/1:13,1:14:72.31:72,0,201	0/1:8,1:9:92.54:93,0,185
chr10	94825976	.	CTG	C	3435.68	PASS	AB=0.767;AC=25;AF=0.446;AN=56;BaseQRankSum=5.908;DP=764;FS=163.119;HRun=0;HaplotypeScore=374.9972;InbreedingCoeff=-0.5873;MQ=33.70;MQ0=31;MQRankSum=-4.283;QD=5.84;ReadPosRankSum=-1.566;VQSLOD=-0.2080;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,10:28:99:239,0,192	1/1:5,5:11:7.30:148,7,0	0/0:44,0:8:17.52:0,18,210	0/0:44,0:6:8.26:0,8,88	0/0:15,5:20:2.60:0,3,34	0/1:17,9:26:99:287,0,137	0/1:33,10:40:99:113,0,143	0/1:9,10:17:99:302,0,110	0/1:12,10:22:96.13:241,0,96	0/1:32,12:40:99:279,0,501	1/1:25,3:28:3.34:34,3,0	0/1:13,10:23:99:240,0,105	0/1:17,10:26:99:212,0,116	0/1:14,10:23:35.99:117,0,36	0/1:20,4:25:28.86:78,0,29	0/1:9,4:13:36.89:84,0,37	0/0:46,0:45:99:0,123,1968	0/1:11,1:12:21.90:22,0,203	0/1:12,9:21:39.84:263,0,40	0/1:26,9:35:13.27:13,0,38	0/1:29,6:31:43.71:44,0,107	0/1:29,10:38:44.31:62,0,44	0/0:16,6:21:5.62:0,6,29	0/1:17,5:22:23.63:59,0,24	0/1:30,7:36:76.71:86,0,77	0/1:19,10:28:99:315,0,193	0/1:12,3:14:60.73:61,0,101	0/1:4,5:9:8.88:135,0,9
chr10	94825982	.	G	GAC	1187.05	PASS	AB=0.857;AC=19;AF=0.339;AN=56;BaseQRankSum=1.984;DP=802;FS=1.804;HRun=0;HaplotypeScore=417.2236;InbreedingCoeff=-0.4206;MQ=35.56;MQ0=29;MQRankSum=-2.545;QD=2.50;ReadPosRankSum=2.502;VQSLOD=0.9188;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,4:26:21.88:0,22,393	0/1:11,1:11:42.55:43,0,88	0/0:53,0:12:33.07:0,33,439	0/0:48,0:8:5.20:0,5,144	0/0:16,6:22:2.61:0,3,47	0/0:22,6:28:19.81:0,20,388	0/1:37,6:40:58.25:58,0,259	0/0:18,0:16:41.77:0,42,411	0/1:21,3:24:36.86:37,0,282	0/1:42,5:44:99:342,0,814	0/0:20,7:28:2.45:0,2,20	0/1:22,3:25:99:113,0,234	0/1:22,6:27:99:115,0,282	0/1:21,3:23:15.83:16,0,102	0/1:20,6:26:24.97:25,0,86	0/1:9,4:13:24.75:25,0,108	0/0:46,0:45:99:0,126,2017	0/1:10,2:12:57.65:58,0,341	0/1:21,2:23:7.87:8,0,381	0/1:28,5:34:42.83:43,0,75	0/0:36,0:32:14.49:0,14,183	0/1:27,9:36:54.86:55,0,109	1/1:18,5:22:4.96:62,5,0	0/0:19,3:21:11.77:0,12,106	0/1:37,9:45:19.06:19,0,149	0/1:25,6:31:99:228,0,543	0/1:12,3:14:47.26:47,0,124	0/1:8,1:9:53.01:53,0,189
chr10	94825983	.	T	TCC	1694.92	PASS	AB=0.989;AC=22;AF=0.393;AN=56;BaseQRankSum=2.113;DP=830;FS=16.771;HRun=0;HaplotypeScore=436.7957;InbreedingCoeff=-0.5278;MQ=35.37;MQ0=29;MQRankSum=-4.019;QD=2.92;ReadPosRankSum=-1.960;VQSLOD=0.0144;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:26:9.90:10,0,368	0/1:11,2:12:36.05:36,0,96	0/0:53,0:13:33.10:0,33,461	0/0:48,0:8:20.59:0,21,234	0/0:23,0:23:2.77:0,3,47	0/1:28,0:28:18.75:19,0,361	0/1:43,0:40:63.95:64,0,239	0/0:18,0:16:44.26:0,44,419	0/1:27,0:27:99:99,0,270	0/1:47,1:44:99:315,0,795	0/1:30,0:30:12.01:31,0,12	0/1:25,0:25:99:117,0,235	0/1:31,0:30:99:186,0,253	0/1:24,0:24:55.73:56,0,83	0/1:28,0:28:67.34:67,0,80	0/1:16,0:16:49.01:49,0,103	0/0:46,0:45:99:0,126,2019	0/1:12,0:12:78.64:79,0,341	0/1:23,0:23:14.99:15,0,396	0/1:34,0:35:53.46:53,0,74	0/0:39,0:35:14.20:0,14,182	0/1:35,1:35:96.61:97,0,102	1/1:24,0:23:5.86:62,6,0	0/0:22,0:21:11.92:0,12,106	0/1:49,0:48:99:157,0,128	0/1:34,0:33:99:239,0,537	0/1:17,0:16:42.47:42,0,135	0/1:10,0:10:61.83:62,0,186
chr10	94825994	.	A	ATG	4117.78	PASS	AB=0.836;AC=32;AF=0.571;AN=56;BaseQRankSum=0.503;DP=832;FS=58.068;HRun=0;HaplotypeScore=436.8074;InbreedingCoeff=0.0155;MQ=38.92;MQ0=21;MQRankSum=-3.954;QD=7.09;ReadPosRankSum=-1.434;VQSLOD=1.2843;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:5.92:0,6,56	0/1:10,4:13:6.04:90,0,6	0/0:51,0:19:44.95:0,45,488	0/0:46,0:11:19.52:0,20,196	0/1:15,7:22:0.19:0,0,0	0/1:21,7:28:74.19:219,0,74	0/1:35,5:38:18.68:103,0,19	0/1:22,1:21:30.90:86,0,31	0/1:21,8:29:14.50:349,0,14	0/0:52,0:48:88.84:0,89,824	0/0:30,0:30:8.92:0,9,95	0/1:20,8:28:26.05:264,0,26	1/1:25,6:31:3.16:389,3,0	1/1:18,6:23:3.33:182,3,0	1/1:17,11:28:0.72:226,1,0	1/1:8,8:16:8.37:337,8,0	0/0:44,0:43:96.26:0,96,1159	0/1:9,3:12:11.62:151,0,12	0/1:27,0:26:61.30:124,0,61	1/1:23,9:32:3.37:82,3,0	0/1:35,1:32:0.09:0,0,0	1/1:25,10:34:4.55:199,5,0	1/1:15,8:22:2.04:48,2,0	1/1:16,4:19:2.67:14,3,0	1/1:33,16:49:17.27:497,17,0	0/1:27,9:35:99:432,0,101	1/1:12,5:16:0.08:148,0,0	0/1:6,4:10:21.33:177,0,21
chr10	94826038	.	CTG	C	3051.14	PASS	AB=0.814;AC=40;AF=0.714;AN=56;BaseQRankSum=7.349;DP=797;FS=2.017;HRun=0;HaplotypeScore=444.4821;InbreedingCoeff=0.1884;MQ=31.99;MQ0=19;MQRankSum=-4.531;QD=4.81;ReadPosRankSum=4.099;VQSLOD=0.7940;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,4:19:4.31:30,4,0	1/1:5,4:8:12.06:105,12,0	0/0:44,1:11:21.07:0,21,343	0/0:44,0:21:51.14:0,51,793	1/1:15,11:29:1.80:9,2,0	1/1:14,8:27:7.38:119,7,0	1/1:19,7:27:32.58:220,33,0	0/1:19,5:23:79.57:99,0,80	1/1:23,11:35:44.48:262,44,0	0/1:38,12:54:99:383,0,132	1/1:20,3:23:0.88:2,1,0	1/1:11,12:28:17.69:249,18,0	0/1:20,8:30:65.56:159,0,66	1/1:14,11:28:21.36:116,21,0	1/1:19,4:25:21.93:95,22,0	1/1:16,6:24:30.60:191,31,0	0/0:42,0:41:99:0,111,1791	0/1:13,2:16:37.67:79,0,38	1/1:7,7:14:5.75:207,6,0	1/1:24,8:33:8.45:39,8,0	0/1:29,7:36:1.09:6,0,1	0/0:20,8:31:0.98:0,1,3	1/1:9,5:14:3.20:12,3,0	1/1:23,3:25:5.45:27,5,0	1/1:25,16:45:45.84:295,46,0	0/1:24,13:41:99:367,0,102	0/1:12,2:15:29.89:30,0,34	0/1:4,4:9:9.18:116,0,9
chr10	94826042	.	GTGTGTA	G	6632.26	PASS	AB=0.987;AC=44;AF=0.786;AN=56;BaseQRankSum=8.050;DP=801;FS=4.013;HRun=0;HaplotypeScore=450.1375;InbreedingCoeff=0.3673;MQ=31.86;MQ0=30;MQRankSum=-7.503;QD=10.49;ReadPosRankSum=3.066;VQSLOD=1.8686;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,3:17:4.27:199,4,0	1/1:9,0:8:13.08:214,13,0	0/0:47,0:9:20.98:0,21,408	0/0:46,0:20:47.98:0,48,1064	1/1:29,1:30:2.96:9,3,0	1/1:27,0:27:15.02:277,15,0	1/1:27,1:28:28.85:332,29,0	0/1:27,0:24:47.53:171,0,48	1/1:33,1:34:46.36:492,46,0	0/1:52,1:52:99:762,0,141	1/1:23,0:23:1.41:3,1,0	1/1:28,1:28:30.02:622,30,0	0/1:29,1:30:41.51:387,0,42	1/1:29,0:29:22.94:224,23,0	1/1:24,0:24:22.81:127,23,0	1/1:23,0:23:21.06:290,21,0	0/0:44,0:43:99:0,116,3471	1/1:16,0:16:1.58:250,2,0	1/1:15,0:14:27.08:353,27,0	1/1:32,0:33:9.63:48,10,0	1/1:35,0:35:1.59:7,2,0	0/0:31,1:31:1.54:0,2,10	1/1:13,1:14:2.97:10,3,0	1/1:25,0:24:4.95:16,5,0	1/1:43,1:44:35.32:457,35,0	0/1:40,0:40:43.48:914,0,43	1/1:17,0:15:24.13:208,24,0	1/1:10,0:10:8.52:261,9,0
chr10	94826044	.	GTGTA	G	8511.37	PASS	AB=0.754;AC=46;AF=0.821;AN=56;BaseQRankSum=8.146;DP=789;FS=0.954;HRun=0;HaplotypeScore=423.4184;InbreedingCoeff=0.4588;MQ=31.69;MQ0=32;MQRankSum=-7.780;QD=13.66;ReadPosRankSum=1.778;VQSLOD=3.4776;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:5.01:89,5,0	1/1:6,2:7:14.93:191,15,0	0/0:45,0:9:20.96:0,21,310	0/0:46,0:19:47.98:0,48,865	1/1:28,3:31:2.47:54,2,0	1/1:22,5:27:28.94:345,29,0	1/1:18,9:27:33.45:521,33,0	0/1:16,10:24:24.61:314,0,25	1/1:22,12:34:51.35:766,51,0	1/1:46,6:50:2.42:550,2,0	1/1:20,1:22:0.88:3,1,0	1/1:25,4:28:25.52:526,26,0	0/1:20,8:28:50.58:576,0,51	1/1:22,7:29:21.51:400,22,0	1/1:13,10:23:26.12:445,26,0	1/1:9,13:22:44.87:796,45,0	0/0:42,0:41:99:0,112,2766	1/1:15,1:16:13.70:269,14,0	1/1:14,1:14:35.66:309,36,0	1/1:26,7:33:11.78:153,12,0	1/1:33,2:34:1.17:54,1,0	0/0:30,2:31:0.18:0,0,3	1/1:10,5:14:3.46:57,3,0	1/1:21,2:22:5.73:109,6,0	1/1:31,14:45:50.83:759,51,0	1/1:31,9:40:16.16:861,16,0	1/1:11,5:15:11.92:237,12,0	1/1:9,0:9:2.32:125,2,0
chr10	94826046	.	GTA	G	4500.48	PASS	AB=0.959;AC=46;AF=0.821;AN=56;BaseQRankSum=7.727;DP=752;FS=0.000;HRun=0;HaplotypeScore=406.0262;InbreedingCoeff=0.5701;MQ=30.51;MQ0=35;MQRankSum=-6.026;QD=7.55;ReadPosRankSum=1.885;VQSLOD=3.4179;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:4.99:49,5,0	1/1:8,0:7:14.61:93,15,0	0/0:43,0:7:20.90:0,21,225	0/0:43,0:17:46.81:0,47,578	1/1:28,0:30:2.18:21,2,0	1/1:24,0:25:26.39:155,26,0	1/1:23,0:24:32.95:266,33,0	1/1:24,0:21:5.98:219,6,0	1/1:33,1:34:50.34:360,50,0	1/1:43,6:47:66.66:689,67,0	1/1:16,5:21:0.44:1,0,0	1/1:27,0:26:30.15:256,30,0	1/1:24,1:27:6.19:253,6,0	1/1:28,0:29:20.91:165,21,0	1/1:22,0:23:24.96:181,25,0	1/1:22,0:22:38.59:323,39,0	0/0:42,0:41:99:0,112,1990	1/1:14,0:15:13.59:148,14,0	1/1:16,0:14:35.18:213,35,0	1/1:27,4:31:12.29:101,12,0	0/1:31,3:33:0.78:16,0,1	0/0:28,0:27:0.98:0,1,3	1/1:15,0:14:3.44:22,3,0	1/1:19,2:22:5.85:55,6,0	1/1:42,1:43:51.90:352,52,0	1/1:38,0:38:43.34:410,43,0	0/1:13,0:13:10.77:74,0,11	1/1:9,0:9:10.16:78,10,0
chr10	94826048	.	ATGTG	A	6613.45	PASS	AB=0.823;AC=38;AF=0.679;AN=56;BaseQRankSum=6.886;DP=719;FS=0.453;HRun=0;HaplotypeScore=390.8830;InbreedingCoeff=0.1740;MQ=30.57;MQ0=35;MQRankSum=-7.427;QD=12.13;ReadPosRankSum=1.122;VQSLOD=3.0741;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,2:15:4.90:62,5,0	1/1:5,4:8:14.92:195,15,0	0/0:41,0:7:9.03:0,9,203	0/0:40,0:15:30.10:0,30,650	1/1:18,10:28:2.46:37,2,0	1/1:17,6:23:14.08:280,14,0	1/1:19,5:24:16.55:391,17,0	0/1:19,3:20:99:149,0,102	1/1:23,7:30:47.89:604,48,0	0/1:38,9:45:99:381,0,321	0/0:17,3:21:0.90:0,1,5	1/1:16,9:24:34.96:511,35,0	0/1:19,7:26:23.74:401,0,24	1/1:18,10:28:18.54:317,19,0	1/1:19,4:23:26.11:304,26,0	1/1:17,5:22:42.38:574,42,0	0/0:44,0:43:99:0,117,2788	0/1:12,1:13:5.99:183,0,6	1/1:11,4:13:17.47:261,17,0	1/1:21,7:28:8.86:84,9,0	0/1:24,6:28:8.42:31,0,8	0/0:20,7:26:0.18:0,0,3	1/1:10,5:14:2.99:40,3,0	1/1:19,1:20:5.73:74,6,0	1/1:28,15:43:37.39:623,37,0	0/1:25,12:37:89.66:806,0,90	0/1:11,2:11:33.53:136,0,34	0/1:5,4:9:17.05:173,0,17
chr10	94826063	.	CCTGTGTGT	C	918.60	PASS	AB=0.960;AC=16;AF=0.286;AN=56;BaseQRankSum=3.077;DP=682;FS=10.695;HRun=0;HaplotypeScore=389.9887;InbreedingCoeff=-0.1136;MQ=35.26;MQ0=38;MQRankSum=-3.252;QD=3.04;ReadPosRankSum=-1.438;VQSLOD=0.6927;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:19.20:0,19,255	0/0:8,0:8:8.70:0,9,168	0/0:26,0:6:18.05:0,18,552	0/0:42,0:11:11.53:0,12,326	1/1:27,0:27:0.18:1,0,0	0/1:16,1:17:99:135,0,182	0/0:22,0:22:31.96:0,32,491	0/0:22,0:18:25.58:0,26,856	0/0:26,2:28:39.91:0,40,969	0/1:37,5:40:99:396,0,1095	1/1:21,1:23:1.88:6,2,0	0/1:25,0:24:74.59:75,0,409	0/1:25,0:25:76.74:77,0,643	0/1:26,0:26:15.33:15,0,487	0/1:27,1:28:20.09:20,0,478	0/0:23,0:23:3.22:0,3,793	0/0:45,0:44:99:0,123,4753	0/1:14,0:14:14.89:15,0,580	0/0:11,0:8:21.54:0,22,435	0/0:24,2:26:8.85:0,9,270	0/0:34,0:30:9.26:0,9,95	1/1:21,0:20:1.07:13,1,0	0/0:16,0:15:3.48:0,3,93	0/0:19,0:19:5.85:0,6,110	0/0:41,2:43:19.03:0,19,327	0/1:34,2:36:99:147,0,1105	0/1:9,2:10:99:132,0,314	0/1:7,0:7:32.56:33,0,199
chr10	94826064	.	CTG	C	441.27	PASS	AB=0.974;AC=18;AF=0.321;AN=56;BaseQRankSum=7.824;DP=700;FS=35.993;HRun=0;HaplotypeScore=370.5034;InbreedingCoeff=-0.2100;MQ=35.08;MQ0=38;MQRankSum=-2.187;QD=1.11;ReadPosRankSum=2.018;VQSLOD=1.3028;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,1:17:26.34:26,0,89	0/1:8,0:8:10.94:11,0,43	0/0:24,1:5:12.04:0,12,189	0/0:42,0:12:11.16:0,11,138	0/1:29,0:29:0.31:0,0,1	0/0:18,0:18:8.08:0,8,116	0/1:22,0:22:63.55:64,0,174	0/0:22,0:18:13.45:0,13,202	0/1:30,0:30:8:8,0,361	0/1:44,0:42:58.56:59,0,337	0/0:23,0:23:2.25:0,2,10	0/1:25,1:25:37.54:38,0,130	0/1:24,1:25:30.12:30,0,199	0/1:25,1:26:9.97:10,0,208	0/0:30,0:30:17.25:0,17,275	0/0:23,0:23:26.55:0,27,428	0/0:41,3:43:70.23:0,70,1668	0/1:13,2:15:75.87:114,0,76	0/1:10,1:8:34.95:69,0,35	0/0:26,0:26:8.60:0,9,144	1/1:29,7:31:5.47:33,5,0	1/1:21,0:20:1.85:18,2,0	0/0:16,0:15:3.01:0,3,48	0/0:22,1:23:3.97:0,4,52	0/1:42,0:42:5.57:6,0,95	0/1:37,0:37:94.22:94,0,242	0/0:12,0:11:6.70:0,7,185	0/1:7,0:7:11.01:11,0,43
chr10	94826074	.	GTGTGCCCA	G	1762.30	PASS	AB=0.972;AC=20;AF=0.357;AN=56;BaseQRankSum=0.949;DP=661;FS=10.512;HRun=0;HaplotypeScore=342.8745;InbreedingCoeff=-0.2677;MQ=37.69;MQ0=32;MQRankSum=-2.670;QD=4.36;ReadPosRankSum=-0.501;VQSLOD=0.8380;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:10.66:0,11,127	0/0:9,0:9:6.42:0,6,57	0/0:23,0:7:17.73:0,18,555	0/0:37,0:10:24.54:0,25,574	1/1:23,3:26:0.14:1,0,0	0/1:15,2:17:68.20:68,0,86	0/1:26,0:26:99:195,0,154	0/1:19,0:15:99:133,0,408	0/1:24,1:25:20.55:21,0,471	0/1:37,1:37:99:654,0,334	1/1:16,1:17:5.01:72,5,0	0/1:26,1:26:57.64:58,0,204	0/0:19,0:19:17.27:0,17,347	0/1:24,0:24:99:146,0,241	0/0:31,1:33:1.07:0,1,200	0/1:20,0:20:16:16,0,465	0/0:46,0:45:99:0,120,4758	0/1:15,1:16:99:222,0,279	0/1:9,0:7:10.66:11,0,110	0/0:26,0:26:12.13:0,12,148	0/1:37,0:33:6.11:17,0,6	1/1:21,0:20:1.14:19,1,0	0/0:11,0:10:3.48:0,3,39	0/0:28,0:28:3.35:0,3,59	0/1:34,0:35:63.69:64,0,84	0/1:32,1:32:99:190,0,212	0/1:11,1:11:29.67:30,0,251	0/0:5,0:5:5.96:0,6,60
chr10	94826076	.	GTGCC	G	2245.98	PASS	AB=0.797;AC=22;AF=0.393;AN=56;BaseQRankSum=4.550;DP=626;FS=32.442;HRun=0;HaplotypeScore=295.5158;InbreedingCoeff=-0.4264;MQ=38.42;MQ0=30;MQRankSum=-3.827;QD=5.35;ReadPosRankSum=2.049;VQSLOD=1.1935;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:34.74:35,0,156	0/1:6,2:8:56.23:56,0,61	0/0:22,0:8:14.24:0,14,416	0/0:38,0:12:0.18:0,0,392	0/1:17,9:26:0.12:0,0,1	0/1:10,5:16:24.71:25,0,160	0/1:17,3:22:99:136,0,250	0/1:12,3:11:47.65:48,0,324	0/1:22,3:25:32.82:33,0,606	0/1:30,7:35:99:613,0,399	1/1:14,3:17:5.03:38,5,0	0/1:19,6:24:99:120,0,242	0/1:12,5:19:38.62:39,0,369	0/1:11,5:20:62.28:62,0,290	0/1:28,2:30:16.18:16,0,382	0/0:14,4:18:30.28:0,30,684	0/0:46,0:45:99:0,120,3239	0/1:13,1:16:99:131,0,113	0/1:5,3:6:71.89:234,0,72	0/0:20,6:27:11.44:0,11,232	1/1:35,0:30:4:46,4,0	0/0:15,2:17:2.20:0,2,6	0/0:5,5:9:3.48:0,3,68	0/0:24,1:27:3.47:0,3,85	0/1:20,13:34:50.74:51,0,156	0/1:22,9:31:99:601,0,234	0/1:10,2:11:57.99:58,0,243	0/1:2,3:5:56.80:57,0,62
chr10	94826078	.	GCCCA	G	2909.94	PASS	AB=0.831;AC=24;AF=0.429;AN=56;BaseQRankSum=4.703;DP=581;FS=38.516;HRun=0;HaplotypeScore=259.8238;InbreedingCoeff=-0.4382;MQ=39.69;MQ0=28;MQRankSum=-5.853;QD=7.05;ReadPosRankSum=2.618;VQSLOD=1.6610;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,6:18:52.26:52,0,108	0/1:4,5:9:21.40:21,0,34	0/0:21,0:8:20.74:0,21,496	0/0:36,1:15:35.39:0,35,718	0/1:16,6:22:0.23:0,0,1	0/1:13,0:13:38.57:39,0,84	0/1:18,4:22:99:188,0,159	0/1:11,3:10:99:175,0,270	0/1:16,8:24:45.96:46,0,425	0/1:22,9:30:99:766,0,295	1/1:8,8:16:5.21:122,5,0	0/1:17,4:20:99:101,0,190	0/1:17,1:18:43.92:44,0,277	0/1:17,1:18:99:162,0,190	0/1:11,17:28:1.93:2,0,245	0/1:13,4:17:5.92:6,0,456	0/0:45,0:44:99:0,120,3401	0/1:13,1:15:61.08:440,0,61	0/1:8,0:6:70.77:92,0,71	0/0:14,11:25:8.77:0,9,136	0/1:13,23:32:1.62:52,0,2	1/1:9,5:13:1.69:44,2,0	0/0:8,2:9:3.48:0,3,39	0/0:16,11:27:3.94:0,4,61	0/1:24,3:27:73.59:74,0,80	0/1:16,12:27:49.76:535,0,50	0/1:9,0:8:82.36:82,0,166	0/1:4,0:4:17.92:18,0,35
chr10	94826080	.	CCA	C	828.36	PASS	AB=0.980;AC=23;AF=0.411;AN=56;BaseQRankSum=6.073;DP=588;FS=38.500;HRun=0;HaplotypeScore=259.6600;InbreedingCoeff=-0.1539;MQ=41.79;MQ0=24;MQRankSum=-4.691;QD=2.60;ReadPosRankSum=3.673;VQSLOD=1.2325;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:22.87:23,0,31	1/1:9,0:9:1.53:6,2,0	0/0:24,0:9:12.08:0,12,393	0/0:40,0:18:41.33:0,41,506	0/0:22,0:22:0.17:0,0,1	0/0:14,0:14:4.01:0,4,22	0/1:21,0:21:39.83:40,0,52	0/1:13,0:9:48.05:48,0,202	0/0:23,0:23:2.38:0,2,102	0/1:31,1:31:71.80:248,0,72	1/1:17,0:17:5.14:58,5,0	0/1:22,0:21:19.33:19,0,102	0/1:20,0:20:9.71:10,0,105	0/1:18,0:18:45.49:45,0,57	0/0:28,0:28:10.46:0,10,84	0/0:18,0:18:14.60:0,15,168	0/0:48,0:47:99:0,126,2359	0/1:13,2:15:45.36:142,0,45	0/1:7,1:6:27.40:48,0,27	0/0:25,0:25:2.59:0,3,19	1/1:35,1:32:2.02:40,2,0	1/1:14,0:13:2.30:41,2,0	0/1:11,0:10:0:0,0,0	0/0:27,0:27:3.34:0,3,22	0/1:25,0:25:13.75:26,0,14	0/1:27,0:26:16.05:160,0,16	0/1:9,0:8:16.78:17,0,121	1/1:4,0:4:1.81:5,2,0
chr10	94826609	.	GTCCA	G	10199.44	PASS	AB=0.873;AC=47;AF=0.904;AN=52;BaseQRankSum=3.141;DP=742;FS=11.010;HRun=0;HaplotypeScore=129.8105;InbreedingCoeff=0.2934;MQ=58.82;MQ0=15;MQRankSum=0.661;QD=15.34;ReadPosRankSum=1.312;VQSLOD=3.8433;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:48:8.40:156,8,0	1/1:9,4:12:12.03:170,12,0	./.	./.	1/1:17,4:20:35.99:447,36,0	1/1:18,4:22:33:443,33,0	1/1:16,14:31:9.01:119,9,0	1/1:22,0:20:5.96:43,6,0	1/1:26,4:29:51.12:695,51,0	0/1:45,0:45:99:294,0,175	0/1:13,0:13:44.17:143,0,44	1/1:26,5:31:65.79:814,66,0	1/1:18,4:21:44.99:585,45,0	1/1:32,3:35:59.88:739,60,0	1/1:25,5:30:48.11:669,48,0	1/1:24,1:25:42.08:527,42,0	0/0:27,0:27:60.10:0,60,1186	1/1:27,4:30:25.05:600,25,0	1/1:23,2:22:10.17:186,10,0	1/1:21,6:27:42.08:551,42,0	0/1:15,24:37:2.64:90,0,3	1/1:17,5:21:30.07:425,30,0	1/1:13,1:14:24.04:292,24,0	1/1:19,7:25:43.24:586,43,0	1/1:28,2:29:36.05:460,36,0	1/1:14,15:29:47.95:598,48,0	1/1:19,3:21:32.96:471,33,0	1/1:3,7:9:6.02:95,6,0
chr10	94826645	.	ATCCT	A	4773.45	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=-0.298;DP=776;FS=13.348;HRun=0;HaplotypeScore=212.9000;InbreedingCoeff=-0.2968;MQ=48.75;MQ0=29;MQRankSum=3.350;QD=7.22;ReadPosRankSum=7.233;VQSLOD=1.6924;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:48,0:47:10.56:11,0,156	0/1:12,0:11:17.83:60,0,18	0/0:20,0:4:12:0,12,108	0/0:18,0:3:5.94:0,6,41	0/1:19,0:18:49.56:116,0,50	1/1:19,0:19:6.12:167,6,0	0/1:36,0:36:96.47:96,0,168	0/0:39,0:27:59.07:0,59,626	0/1:36,0:35:99:194,0,99	1/1:47,3:44:74.49:999,74,0	1/1:18,3:19:24.06:366,24,0	0/1:35,0:34:27.50:259,0,27	0/1:28,0:28:8.59:218,0,9	0/1:32,0:32:35.05:244,0,35	0/1:35,0:35:76.01:200,0,76	0/1:22,0:21:58.46:121,0,58	0/0:38,0:37:64.97:0,65,1484	0/1:27,0:26:16.02:279,0,16	0/1:24,0:20:32.31:32,0,210	0/1:28,0:28:0.48:192,0,0	0/1:49,0:48:67.96:68,0,152	1/1:16,0:15:7.28:163,7,0	0/1:17,0:16:56.11:63,0,56	0/1:28,0:27:7.71:268,0,8	0/1:22,0:20:15.17:118,0,15	1/1:25,0:21:35.46:294,35,0	0/1:24,0:24:43.20:203,0,43	1/1:8,0:8:3.65:43,4,0
chr10	94826662	.	ACCATCCATCCATCCAT	A	10641.22	PASS	AB=0.879;AC=32;AF=0.615;AN=52;BaseQRankSum=3.970;DP=752;FS=6.565;HRun=0;HaplotypeScore=313.4233;InbreedingCoeff=0.1093;MQ=46.35;MQ0=45;MQRankSum=-4.966;QD=20.50;ReadPosRankSum=1.331;VQSLOD=2.6137;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:50:48.16:0,48,2271	1/1:5,1:13:5.05:138,5,0	./.	./.	0/0:16,0:17:2.29:0,2,152	1/1:5,11:16:21.03:762,21,0	0/1:32,0:32:15.84:569,0,16	0/1:40,0:28:35.89:36,0,213	0/1:19,0:30:37.54:330,0,38	0/0:31,0:33:40.89:0,41,516	0/0:11,0:17:17.66:0,18,156	1/1:24,6:29:48.05:1303,48,0	1/1:18,7:25:45.15:1445,45,0	1/1:17,5:22:36.98:989,37,0	1/1:10,0:30:9.29:336,9,0	0/1:14,0:16:81.37:106,0,81	0/0:41,0:40:78.20:0,78,3121	0/1:23,0:24:50.71:51,0,59	1/1:16,10:24:3.84:850,4,0	0/1:12,15:28:7.19:467,0,7	0/1:54,0:51:85.49:252,0,85	0/1:12,3:14:47:408,0,47	1/1:10,2:11:17.97:274,18,0	1/1:23,4:26:23.10:495,23,0	1/1:8,0:16:14.93:125,15,0	0/1:24,1:21:99:392,0,202	0/1:22,4:26:73.16:1020,0,73	1/1:5,1:6:9.03:294,9,0
chr10	94826758	.	TCCTTCCTTCCAA	T	1317.52	PASS	AB=0.909;AC=6;AF=0.107;AN=56;BaseQRankSum=6.656;DP=824;FS=9.595;HRun=0;HaplotypeScore=270.8427;InbreedingCoeff=-0.1407;MQ=60.47;MQ0=20;MQRankSum=-5.780;QD=7.44;ReadPosRankSum=-7.032;VQSLOD=-0.7087;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:40:99:0,99,3290	0/0:14,0:14:18.05:0,18,1077	0/0:47,0:28:23.85:0,24,1179	0/0:44,0:21:18.67:0,19,745	0/0:21,0:21:28.36:0,28,1486	0/0:22,0:22:3.29:0,3,1193	0/0:30,0:29:50.13:0,50,1994	0/0:28,0:25:66.23:0,66,1783	0/0:31,0:31:54.19:0,54,2109	0/0:29,0:28:81.23:0,81,3030	0/0:15,0:15:12.36:0,12,931	0/0:32,0:32:60.75:0,61,1584	0/0:21,0:21:8.43:0,8,756	0/0:41,0:41:61.01:0,61,2155	0/0:33,0:33:72.25:0,72,2845	0/0:29,0:28:60.21:0,60,2208	0/0:44,0:44:99:0,101,4945	0/0:38,0:38:3.39:0,3,2743	0/1:20,1:20:99:398,0,891	0/1:24,2:26:99:340,0,1340	0/1:62,0:60:99:185,0,3188	0/1:21,0:21:24.06:24,0,997	0/0:31,0:31:11.76:0,12,1137	0/0:28,0:28:48.71:0,49,1313	0/0:13,0:13:30.10:0,30,1540	0/1:23,2:25:99:144,0,1992	0/1:10,12:22:99:350,0,1057	0/0:14,0:14:30.10:0,30,843
chr10	94826770	.	A	ACCAT	8714.65	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-1.089;DP=893;FS=0.000;HRun=0;HaplotypeScore=146.2112;InbreedingCoeff=0.3995;MQ=54.22;MQ0=32;MQRankSum=0.875;QD=10.77;ReadPosRankSum=-1.916;VQSLOD=3.8409;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,21:46:24.08:568,24,0	1/1:14,2:16:21.06:415,21,0	0/0:41,0:15:2.96:0,3,19	0/1:41,0:13:1.63:2,0,17	1/1:10,12:22:30.10:531,30,0	1/1:12,0:23:9.03:131,9,0	1/1:31,0:30:21.48:209,21,0	1/1:33,0:29:14.95:118,15,0	1/1:9,29:39:30.10:690,30,0	1/1:15,18:31:1.24:995,1,0	1/1:6,11:19:20.55:374,21,0	1/1:16,0:38:15.05:234,15,0	1/1:7,0:20:21.07:325,21,0	1/1:23,1:43:12.04:193,12,0	1/1:17,19:38:27.09:631,27,0	1/1:11,24:34:26.93:638,27,0	0/0:43,0:43:69.22:0,69,1045	1/1:18,24:42:7.11:633,7,0	1/1:24,0:18:24.12:227,24,0	1/1:26,0:26:34.50:291,35,0	1/1:69,0:65:46.32:381,46,0	1/1:8,1:22:20.67:282,21,0	1/1:12,0:33:6.02:77,6,0	1/1:16,1:38:5.32:15,5,0	1/1:2,13:15:24.08:567,24,0	0/1:25,0:25:5.31:55,0,5	0/1:21,0:21:41.03:81,0,41	1/1:7,0:13:3.01:52,3,0
chr10	94829418	.	TGTGC	T	2011.52	PASS	AB=0.977;AC=32;AF=0.800;AN=40;BaseQRankSum=-0.975;DP=457;FS=0.000;HRun=0;HaplotypeScore=81.4376;InbreedingCoeff=0.2690;MQ=68.92;MQ0=9;MQRankSum=1.747;QD=7.40;ReadPosRankSum=2.346;VQSLOD=1.7174;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:9.19:0,9,64	1/1:3,0:3:3:25,3,0	./.	0/1:14,0:10:8.98:24,0,9	./.	1/1:13,0:12:26.95:219,27,0	./.	./.	1/1:10,0:10:8.67:61,9,0	0/0:13,0:13:14.58:0,15,110	./.	0/1:30,0:30:41.93:307,0,42	0/1:9,1:10:20.77:80,0,21	1/1:23,1:24:3.95:49,4,0	./.	1/1:13,0:12:17.87:135,18,0	1/1:30,1:31:38.84:368,39,0	1/1:19,0:19:17.40:134,17,0	1/1:13,0:12:2.86:25,3,0	0/1:2,0:2:0:0,0,0	./.	1/1:3,0:3:2.97:20,3,0	./.	1/1:32,2:34:38.32:357,38,0	1/1:16,0:16:11.04:98,11,0	1/1:16,0:16:2.97:20,3,0	1/1:15,0:15:17.96:166,18,0	1/1:6,0:6:5.99:50,6,0
chr10	94829444	.	TGCGTGCGTGC	T	1494.10	PASS	AB=0.982;AC=18;AF=0.360;AN=50;BaseQRankSum=-0.374;DP=425;FS=28.558;HRun=0;HaplotypeScore=108.6261;InbreedingCoeff=-0.2957;MQ=50.83;MQ0=23;MQRankSum=-1.439;QD=6.07;ReadPosRankSum=1.009;VQSLOD=0.3099;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:13.17:0,13,274	0/1:5,0:5:15.50:105,0,15	0/1:5,0:2:9.98:10,0,38	0/0:5,0:3:7.14:0,7,40	./.	0/1:13,0:12:13.80:14,0,259	0/1:30,0:27:14.56:15,0,233	0/0:5,0:3:2.20:0,2,9	0/1:7,0:9:17.65:159,0,18	0/0:10,0:10:7.75:0,8,385	./.	0/1:32,0:31:58.04:58,0,961	0/0:15,0:15:24.57:0,25,378	0/1:21,0:21:99:104,0,188	1/1:8,0:7:3.01:42,3,0	1/1:11,0:11:3.68:332,4,0	0/0:32,0:31:17.73:0,18,895	0/1:26,0:25:87.47:390,0,87	0/1:14,0:13:8.75:9,0,64	./.	0/0:64,0:61:36.24:0,36,258	0/1:6,0:6:23.07:34,0,23	0/0:6,0:6:2.97:0,3,20	0/1:32,0:29:10.66:11,0,1084	0/1:11,0:12:17.81:246,0,18	0/1:9,0:8:6.75:29,0,7	0/1:12,0:12:58.42:83,0,58	0/0:10,0:9:19.27:0,19,192
chr10	94829452	.	TGC	T	3387.90	PASS	AB=0.922;AC=31;AF=0.596;AN=52;BaseQRankSum=-1.716;DP=478;FS=1.825;HRun=0;HaplotypeScore=67.4497;InbreedingCoeff=-0.2942;MQ=49.48;MQ0=28;MQRankSum=0.346;QD=7.77;ReadPosRankSum=4.118;VQSLOD=2.7841;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:9.70:0,10,121	0/1:7,1:8:7.71:98,0,8	./.	0/1:3,0:2:8.98:24,0,9	0/0:12,0:11:2.92:0,3,17	0/1:17,1:17:18:239,0,18	0/1:17,17:31:30.55:31,0,136	1/1:11,0:8:2.69:13,3,0	0/1:12,0:12:22.66:35,0,23	0/1:15,0:15:0.49:0,0,121	./.	1/1:28,8:35:52.74:729,53,0	1/1:13,4:16:21.27:234,21,0	0/1:5,18:23:36.70:249,0,37	1/1:2,7:8:3.01:42,3,0	0/1:14,0:13:37.87:115,0,38	0/1:33,1:33:99:216,0,250	0/1:27,2:28:99:178,0,163	1/1:13,0:12:3.72:27,4,0	0/0:4,0:4:0.39:0,0,1	0/1:68,0:63:53.41:53,0,130	0/1:5,1:6:8.39:53,0,8	1/1:4,3:6:3.01:42,3,0	1/1:26,10:33:11.84:707,12,0	0/1:11,0:11:14.85:87,0,15	0/1:9,0:8:4.21:35,0,4	1/1:11,1:12:3.89:127,4,0	0/1:11,0:9:19.80:53,0,20
chr10	94829454	.	CGT	C	653.22	PASS	AB=0.962;AC=22;AF=0.423;AN=52;BaseQRankSum=5.295;DP=491;FS=11.204;HRun=0;HaplotypeScore=78.2785;InbreedingCoeff=-0.1382;MQ=49.35;MQ0=30;MQRankSum=3.001;QD=2.02;ReadPosRankSum=5.309;VQSLOD=0.0553;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,1:18:17.95:18,0,33	0/1:7,0:7:9.66:10,0,37	./.	./.	0/0:12,0:11:3.01:0,3,40	0/1:18,0:17:0.92:1,0,125	0/1:35,1:33:26.61:27,0,211	1/1:10,1:8:2.92:33,3,0	0/0:13,0:14:12.84:0,13,137	1/1:13,2:15:2.30:61,2,0	1/1:7,0:3:2.98:21,3,0	0/1:35,0:35:42.07:122,0,42	0/1:16,0:15:8.51:54,0,9	0/1:23,0:23:60.07:109,0,60	1/1:9,0:8:2.92:17,3,0	0/0:14,0:13:9.15:0,9,125	0/1:31,3:33:38.35:38,0,414	0/1:28,1:28:16.20:16,0,474	0/0:13,0:12:5.91:0,6,38	0/0:3,0:3:0.47:0,0,1	0/0:72,0:67:17.90:0,18,466	0/1:8,0:8:8.63:9,0,46	1/1:7,0:6:2.92:17,3,0	0/1:33,0:33:65.05:190,0,65	0/0:11,0:11:6.95:0,7,102	0/0:9,0:8:11.63:0,12,86	0/0:12,0:12:0.45:0,0,36	0/1:7,4:9:7.70:55,0,8
chr10	94830074	.	A	AT	13328.16	PASS	AB=0.810;AC=50;AF=0.893;AN=56;BaseQRankSum=-8.083;DP=602;FS=2.032;HRun=10;HaplotypeScore=63.0516;InbreedingCoeff=0.6871;MQ=74.53;MQ0=1;MQRankSum=-2.445;QD=23.84;ReadPosRankSum=2.765;VQSLOD=5.5778;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,33:38:65.58:903,66,0	1/1:1,8:9:24.06:256,24,0	0/0:18,1:18:27.75:0,28,204	0/1:13,0:10:16.56:17,0,74	1/1:3,26:29:54.40:764,54,0	1/1:1,20:21:54.14:576,54,0	0/1:5,8:13:0.99:227,0,1	1/1:3,24:27:69.14:720,69,0	1/1:1,13:14:35.45:360,35,0	1/1:3,29:33:86.95:866,87,0	1/1:3,22:26:62.99:642,63,0	1/1:2,15:17:33.08:352,33,0	1/1:4,15:19:38.93:415,39,0	1/1:1,18:19:17.46:391,17,0	1/1:2,24:26:57.14:608,57,0	1/1:2,18:20:50.96:544,51,0	0/0:24,0:24:56.89:0,57,464	1/1:1,18:19:54.14:575,54,0	1/1:6,25:31:75.17:787,75,0	1/1:2,19:21:57.10:595,57,0	1/1:2,10:13:29.94:302,30,0	1/1:3,8:11:24.02:242,24,0	1/1:3,14:17:33.08:352,33,0	1/1:1,20:21:51.13:544,51,0	1/1:5,16:21:17.46:391,17,0	1/1:6,23:29:51.23:664,51,0	1/1:5,28:33:53.29:755,53,0	1/1:4,15:19:45.11:480,45,0
chr10	94830347	.	AG	A	11476.26	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.193;DP=576;FS=6.220;HRun=9;HaplotypeScore=64.0674;InbreedingCoeff=0.9875;MQ=74.56;MQ0=0;MQRankSum=-4.715;QD=21.90;ReadPosRankSum=3.613;VQSLOD=5.7554;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,25:32:69.03:631,69,0	1/1:1,11:12:30.01:275,30,0	0/0:12,0:13:24.75:0,25,241	0/0:13,0:13:20.86:0,21,201	1/1:3,22:25:65.90:585,66,0	1/1:1,20:21:48.03:439,48,0	1/1:2,7:9:21.01:192,21,0	1/1:4,16:20:45:407,45,0	1/1:2,23:25:63.03:577,63,0	1/1:4,22:26:66.01:598,66,0	1/1:2,22:24:59.93:532,60,0	1/1:0,18:18:47.99:439,48,0	1/1:3,15:18:39:357,39,0	1/1:4,20:24:60.03:549,60,0	1/1:2,12:14:33.02:302,33,0	1/1:2,23:25:63.03:577,63,0	0/0:25,0:26:69.02:0,69,766	1/1:4,18:22:13.39:377,13,0	1/1:9,12:22:38.02:328,38,0	1/1:1,14:15:39.02:357,39,0	1/1:2,29:31:87.04:796,87,0	1/1:3,12:15:27.01:247,27,0	1/1:2,18:20:45.02:412,45,0	1/1:0,14:14:39.02:357,39,0	1/1:3,18:21:51.02:467,51,0	1/1:2,16:18:48.03:439,48,0	1/1:6,23:29:69.03:631,69,0	1/1:0,24:24:66.04:604,66,0
chr10	94830702	.	G	GGT	1711.84	PASS	AB=0.824;AC=24;AF=0.480;AN=50;BaseQRankSum=-3.811;DP=565;FS=5.221;HRun=0;HaplotypeScore=98.6078;InbreedingCoeff=0.0977;MQ=63.87;MQ0=11;MQRankSum=0.256;QD=5.17;ReadPosRankSum=-0.443;VQSLOD=2.3528;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:30:18.20:0,18,113	0/1:8,2:11:25.96:38,0,26	./.	./.	1/1:9,0:12:3:26,3,0	0/1:13,2:17:22.96:65,0,23	1/1:22,2:25:9.03:132,9,0	./.	1/1:20,1:23:21.02:245,21,0	0/0:17,0:23:17.04:0,17,84	0/0:9,0:10:2.84:0,3,14	0/1:14,2:16:15.93:131,0,16	0/1:17,3:20:40.19:153,0,40	1/1:16,0:16:2.83:43,3,0	1/1:10,6:18:12.03:176,12,0	0/1:12,3:23:10.98:172,0,11	1/1:13,8:21:16.30:222,16,0	0/1:18,0:17:27.94:28,0,79	0/0:10,0:9:2.04:0,2,6	0/0:8,0:11:2.54:0,3,14	0/0:35,0:37:2.84:0,3,14	0/1:17,4:23:16.74:141,0,17	1/1:16,0:16:3.01:44,3,0	0/1:36,13:51:99:229,0,131	1/1:17,0:20:3:25,3,0	0/0:12,0:13:2.43:0,2,14	0/0:21,0:26:19.88:0,20,98	0/0:5,0:7:8.69:0,9,60
chr10	94831110	.	C	CT	1111.24	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-3.144;DP=583;FS=1.116;HRun=13;HaplotypeScore=75.3407;InbreedingCoeff=0.8837;MQ=69.33;MQ0=0;MQRankSum=-0.901;QD=11.58;ReadPosRankSum=-2.441;VQSLOD=2.8346;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:31:26.13:0,26,307	0/0:9,0:11:18.86:0,19,112	0/0:9,0:9:6.06:0,6,34	0/0:7,0:7:1.87:0,2,6	0/0:30,2:33:20.37:0,20,409	0/0:19,0:19:4.59:0,5,206	0/0:19,0:19:41.56:0,42,286	0/0:28,0:29:47.42:0,47,345	0/0:17,0:19:43.54:0,44,287	0/0:19,0:19:46.66:0,47,313	0/0:21,0:24:54.32:0,54,349	0/0:18,1:19:10.75:0,11,217	0/0:18,0:18:31.61:0,32,207	0/0:18,0:18:23.13:0,23,162	0/0:23,0:23:41.51:0,42,283	0/0:19,0:19:53.46:0,53,363	0/0:47,0:45:85.83:0,86,582	0/0:22,0:22:47.40:0,47,321	1/1:4,10:15:9.38:213,9,0	1/1:4,8:13:20.90:169,21,0	1/1:6,18:25:29.87:265,30,0	0/0:16,0:18:43.63:0,44,292	0/0:21,1:22:19.58:0,20,271	0/0:28,0:28:59.29:0,59,399	0/0:11,0:12:25.76:0,26,166	1/1:10,14:24:48.03:438,48,0	1/1:8,9:19:23.70:196,24,0	0/0:20,0:21:34.58:0,35,232
chr10	94831223	.	C	CT	13358.89	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-12.522;DP=607;FS=11.116;HRun=8;HaplotypeScore=56.3578;InbreedingCoeff=0.9956;MQ=81.08;MQ0=0;MQRankSum=-3.309;QD=28.92;ReadPosRankSum=3.209;VQSLOD=4.6436;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.04:0,96,879	1/1:1,7:8:21.06:242,21,0	0/0:20,0:20:40:0,40,378	0/0:15,0:15:27:0,27,244	1/1:2,29:32:87.05:969,87,0	1/1:1,21:22:54.16:623,54,0	1/1:0,23:23:63.19:727,63,0	1/1:6,21:27:63.65:718,64,0	1/1:3,16:19:51.14:580,51,0	0/0:32,0:32:84.04:0,84,766	0/0:16,0:16:45.02:0,45,412	1/1:0,14:14:42.12:485,42,0	1/1:4,18:22:54.16:622,54,0	1/1:0,14:14:42.12:485,42,0	1/1:2,20:22:51.15:589,51,0	1/1:4,16:20:45.13:519,45,0	0/0:28,0:28:71.98:0,72,651	1/1:3,12:15:36.11:415,36,0	1/1:4,13:17:39.09:430,39,0	1/1:3,37:40:99:1267,111,0	1/1:1,12:13:30.09:346,30,0	1/1:7,21:28:66.15:741,66,0	1/1:4,17:21:48.14:554,48,0	1/1:4,25:29:69.21:796,69,0	1/1:0,18:18:48.14:554,48,0	1/1:2,16:18:48.14:554,48,0	1/1:4,28:32:84.25:968,84,0	1/1:1,7:8:15.04:173,15,0
chr10	94832032	.	CCCT	C	397.57	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=0.418;DP=542;FS=5.579;HRun=0;HaplotypeScore=178.2187;InbreedingCoeff=0.9386;MQ=50.70;MQ0=28;MQRankSum=-0.001;QD=14.20;ReadPosRankSum=0.211;VQSLOD=3.2209;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:45.12:0,45,758	0/0:7,0:7:18.06:0,18,324	./.	0/0:23,0:9:11.95:0,12,107	0/0:20,0:19:48.15:0,48,882	0/0:29,0:26:63.19:0,63,1109	0/0:18,0:17:23.97:0,24,360	0/0:23,0:22:27.04:0,27,433	0/0:22,0:21:54.18:0,54,996	1/1:5,15:18:30.04:402,30,0	1/1:5,3:7:9.03:109,9,0	0/0:20,0:20:38.45:0,38,668	0/0:22,0:21:51.10:0,51,897	0/0:23,0:23:57.09:0,57,927	0/0:23,0:23:57.18:0,57,990	0/0:15,0:15:33.09:0,33,597	0/0:16,0:16:24.07:0,24,415	0/0:10,0:9:18.06:0,18,357	0/0:20,0:18:42.03:0,42,644	0/0:14,0:13:30.10:0,30,592	0/0:23,0:21:20.10:0,20,512	0/0:16,0:14:33.10:0,33,581	0/0:20,0:19:33.09:0,33,612	0/0:26,0:25:50.44:0,50,810	0/0:22,0:22:50.62:0,51,856	0/0:25,0:23:48.16:0,48,817	0/0:24,0:23:46.95:0,47,840	0/0:16,0:15:26.74:0,27,444
chr10	94833202	.	C	CTTTT	5974.77	PASS	AB=1.000;AC=51;AF=0.944;AN=54;BaseQRankSum=0.605;DP=530;FS=4.293;HRun=22;HaplotypeScore=165.9691;InbreedingCoeff=0.3580;MQ=50.87;MQ0=6;MQRankSum=0.130;QD=11.97;ReadPosRankSum=-2.031;VQSLOD=-0.6923;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,16:46:11.53:118,12,0	1/1:5,0:5:8.93:83,9,0	0/0:21,0:7:2.96:0,3,19	./.	1/1:29,0:29:50.43:518,50,0	1/1:21,0:20:34.04:386,34,0	1/1:19,0:19:19.69:219,20,0	1/1:44,0:42:46.77:471,47,0	1/1:13,0:13:12.01:128,12,0	1/1:25,0:25:21.33:127,21,0	0/1:20,0:20:12.61:50,0,13	1/1:13,0:13:26.27:294,26,0	1/1:10,0:10:19.36:194,19,0	1/1:19,0:19:29.04:289,29,0	1/1:16,0:16:31.49:302,31,0	1/1:17,0:16:27.02:311,27,0	1/1:20,0:19:2.24:6,2,0	1/1:9,0:9:9.92:132,10,0	1/1:17,0:17:30.03:377,30,0	1/1:20,0:20:12.93:164,13,0	1/1:11,0:11:2.70:7,3,0	1/1:15,0:15:20.85:242,21,0	1/1:14,0:14:9.01:103,9,0	1/1:11,0:11:9.01:100,9,0	1/1:25,0:23:39.54:341,40,0	1/1:25,0:25:35.86:392,36,0	1/1:24,0:24:36.45:416,36,0	1/1:9,0:9:15.05:205,15,0
chr10	94833511	.	A	ACGT	1443.16	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.028;DP=583;FS=1.663;HRun=0;HaplotypeScore=89.7402;InbreedingCoeff=0.9819;MQ=87.97;MQ0=0;MQRankSum=-3.435;QD=43.73;ReadPosRankSum=1.076;VQSLOD=4.7583;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1686	0/0:4,0:4:12.04:0,12,190	0/0:14,0:14:39.13:0,39,592	0/0:31,0:31:87.24:0,87,1285	0/0:19,0:19:42.14:0,42,658	0/0:14,0:14:39.13:0,39,618	0/0:21,0:21:45.15:0,45,712	0/0:32,0:32:75.26:0,75,1186	0/0:16,0:16:45.15:0,45,713	1/1:3,17:20:51.18:1112,51,0	1/1:4,7:13:21.07:452,21,0	0/0:23,0:23:57.18:0,57,881	0/0:19,0:19:48.16:0,48,757	0/0:24,0:24:60.20:0,60,943	0/0:17,0:17:51.17:0,51,805	0/0:16,0:16:45.15:0,45,714	0/0:33,0:33:86.24:0,86,1340	0/0:28,0:27:75.26:0,75,1181	0/0:18,0:18:44.74:0,45,713	0/0:17,0:17:45.15:0,45,713	0/0:33,0:33:87.28:0,87,1353	0/0:12,0:12:33.11:0,33,519	0/0:14,0:14:36.12:0,36,570	0/0:26,0:26:72.20:0,72,1101	0/0:14,0:14:39.12:0,39,597	0/0:25,0:25:66.22:0,66,1041	0/0:25,0:24:72.25:0,72,1141	0/0:18,0:18:48.16:0,48,758
chr10	94833674	.	TTTTC	T	10143.20	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=-0.843;DP=553;FS=5.219;HRun=0;HaplotypeScore=111.4509;InbreedingCoeff=0.6905;MQ=61.08;MQ0=9;MQRankSum=-1.364;QD=21.63;ReadPosRankSum=2.194;VQSLOD=4.0586;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,22:32:38.95:550,39,0	1/1:9,1:10:21.84:231,22,0	0/0:37,0:15:21.50:0,21,244	0/0:24,0:11:18.96:0,19,193	1/1:19,0:19:52.43:528,52,0	1/1:11,1:12:18.05:244,18,0	1/1:15,1:16:27.05:357,27,0	1/1:29,0:28:75.83:675,76,0	1/1:11,0:11:12.04:172,12,0	0/1:16,0:16:51.26:51,0,125	0/1:20,0:20:77.54:78,0,197	1/1:18,0:17:18.06:257,18,0	1/1:15,0:15:35.78:343,36,0	1/1:12,0:12:33.79:349,34,0	1/1:18,0:17:38.90:442,39,0	1/1:20,0:20:21.07:299,21,0	0/0:23,0:23:60.14:0,60,1159	1/1:16,1:17:41.97:440,42,0	1/1:21,0:21:57.06:604,57,0	1/1:31,1:32:83.60:809,84,0	1/1:13,0:13:28.42:241,28,0	1/1:18,1:19:53.04:583,53,0	1/1:19,0:19:32.04:355,32,0	1/1:26,1:26:59.88:658,60,0	1/1:21,1:22:56.81:612,57,0	1/1:21,0:21:26.92:582,27,0	1/1:19,0:18:45.40:449,45,0	1/1:10,0:10:18.02:236,18,0
chr10	94833677	.	TCTTTC	T	7711.12	PASS	AB=0.920;AC=42;AF=0.750;AN=56;BaseQRankSum=4.310;DP=553;FS=30.062;HRun=0;HaplotypeScore=128.8454;InbreedingCoeff=0.2460;MQ=59.48;MQ0=10;MQRankSum=-2.420;QD=16.30;ReadPosRankSum=3.491;VQSLOD=2.7464;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:31:11.65:276,12,0	0/1:8,0:9:3.16:136,0,3	0/0:34,0:12:17.46:0,17,308	0/0:23,0:10:22.55:0,23,289	1/1:19,0:19:23.58:358,24,0	1/1:12,1:13:10.41:217,10,0	1/1:16,2:18:27.07:394,27,0	1/1:29,1:29:39.64:308,40,0	1/1:12,0:11:12.04:184,12,0	0/1:17,0:17:91.19:91,0,217	0/1:23,0:23:99:268,0,178	1/1:18,0:17:18.06:298,18,0	1/1:12,0:12:21.93:236,22,0	1/1:13,1:14:34.70:387,35,0	0/1:15,3:17:33.29:395,0,33	1/1:19,1:20:22.89:319,23,0	0/0:22,0:22:63.16:0,63,1481	0/1:17,0:17:31.79:209,0,32	0/1:13,10:23:22.54:451,0,23	1/1:32,0:32:14.84:462,15,0	1/1:13,0:13:20.69:158,21,0	1/1:19,0:19:18.05:390,18,0	0/1:19,1:20:37.17:290,0,37	1/1:26,0:25:28.25:428,28,0	1/1:20,0:20:46.15:469,46,0	0/1:20,1:21:5.69:384,0,6	1/1:18,0:17:13.01:359,13,0	1/1:10,0:10:18.02:242,18,0
chr10	94833678	.	CTTTCT	C	12357.54	PASS	AB=0.847;AC=47;AF=0.839;AN=56;BaseQRankSum=-1.414;DP=557;FS=9.116;HRun=0;HaplotypeScore=114.1519;InbreedingCoeff=0.6017;MQ=60.22;MQ0=10;MQRankSum=-0.847;QD=25.96;ReadPosRankSum=1.673;VQSLOD=4.2681;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,2:32:22.97:391,23,0	1/1:5,1:9:7.03:241,7,0	0/0:34,0:11:24.34:0,24,317	0/0:25,0:11:17.46:0,17,201	1/1:10,4:19:51.36:595,51,0	1/1:3,10:13:15.51:270,16,0	1/1:4,14:18:27.04:456,27,0	1/1:2,28:29:77.86:811,78,0	0/1:2,11:12:3.77:234,0,4	0/1:17,0:17:53.44:53,0,203	0/1:20,0:23:99:133,0,322	1/1:1,17:17:18.06:372,18,0	1/1:8,2:12:30.18:350,30,0	1/1:13,2:15:44.36:549,44,0	1/1:10,6:16:38.90:595,39,0	1/1:3,16:20:21.54:421,22,0	0/0:22,0:22:63.14:0,63,1428	1/1:13,3:16:43.54:521,44,0	1/1:18,3:23:36.56:759,37,0	1/1:3,28:32:86.55:993,87,0	1/1:10,3:13:28.23:285,28,0	1/1:10,9:20:56.08:764,56,0	1/1:6,13:20:27.82:440,28,0	1/1:17,8:26:61.30:751,61,0	1/1:11,7:20:58.53:753,59,0	1/1:15,5:21:15.57:718,16,0	1/1:15,3:17:28.57:551,29,0	1/1:0,10:10:18.06:351,18,0
chr10	94833681	.	TC	T	7854.48	PASS	AB=0.962;AC=51;AF=0.911;AN=56;BaseQRankSum=2.186;DP=552;FS=1.336;HRun=1;HaplotypeScore=97.3126;InbreedingCoeff=0.7602;MQ=60.23;MQ0=10;MQRankSum=-3.476;QD=15.96;ReadPosRankSum=0.850;VQSLOD=4.9655;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,1:33:44.70:333,45,0	1/1:9,0:9:26.69:197,27,0	0/0:35,0:12:20.21:0,20,143	0/1:24,1:11:17.56:18,0,94	1/1:20,0:20:51.67:433,52,0	1/1:13,0:13:14.88:120,15,0	1/1:17,1:18:26.83:208,27,0	1/1:30,0:29:77.22:593,77,0	1/1:13,0:12:13.55:107,14,0	1/1:15,0:15:33.18:237,33,0	1/1:22,0:22:55.32:373,55,0	1/1:18,0:17:17.99:153,18,0	1/1:12,0:12:28.34:247,28,0	1/1:14,2:16:35.44:288,35,0	1/1:15,0:14:38.82:306,39,0	1/1:19,1:20:21.87:181,22,0	0/0:25,0:25:43.84:0,44,554	1/1:14,1:15:41.98:331,42,0	1/1:21,0:21:34.81:395,35,0	1/1:30,0:30:83.74:612,84,0	1/1:13,0:13:28.47:201,28,0	1/1:21,0:21:53.39:443,53,0	1/1:16,0:16:28.43:209,28,0	1/1:25,1:25:59.67:467,60,0	1/1:20,0:20:56.96:438,57,0	1/1:22,0:22:63.99:510,64,0	1/1:18,1:18:45.15:321,45,0	1/1:10,0:10:16.81:135,17,0
chr10	94833682	.	CT	C	1337.53	PASS	AB=0.973;AC=40;AF=0.714;AN=56;BaseQRankSum=6.259;DP=556;FS=11.500;HRun=15;HaplotypeScore=121.2745;InbreedingCoeff=0.3454;MQ=60.14;MQ0=11;MQRankSum=-2.824;QD=2.91;ReadPosRankSum=4.995;VQSLOD=-0.6521;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:11.13:35,11,0	1/1:9,0:9:9.33:33,9,0	0/0:35,0:12:18.29:0,18,129	0/1:25,1:11:10.10:10,0,35	1/1:19,1:20:17.66:80,18,0	0/1:14,0:14:6.10:25,0,6	1/1:18,0:18:17.99:69,18,0	1/1:31,0:30:12.79:74,13,0	0/1:12,1:12:0.83:27,0,1	0/0:15,0:15:10.18:0,10,63	0/0:22,0:22:17.65:0,18,103	1/1:17,1:17:15.66:59,16,0	0/1:12,0:12:11.44:20,0,11	0/1:15,1:16:0.71:65,0,1	1/1:15,0:14:20.29:76,20,0	1/1:20,0:20:2.20:47,2,0	0/0:23,2:25:24.11:0,24,419	1/1:16,0:16:17.33:76,17,0	1/1:22,0:22:1.79:97,2,0	1/1:30,0:30:30.34:131,30,0	1/1:13,0:13:7.42:30,7,0	1/1:22,0:22:29.25:130,29,0	0/1:16,0:16:0.70:55,0,1	1/1:26,0:25:20.70:104,21,0	1/1:17,1:18:13.06:89,13,0	0/1:22,0:22:7:53,0,7	0/1:18,1:18:3.95:46,0,4	1/1:10,0:10:16.27:72,16,0
chr10	94833801	.	T	TG	1043.72	PASS	AB=0.998;AC=21;AF=0.375;AN=56;BaseQRankSum=-1.418;DP=617;FS=1.095;HRun=0;HaplotypeScore=119.8869;InbreedingCoeff=-0.1132;MQ=55.41;MQ0=63;MQRankSum=0.206;QD=3.00;ReadPosRankSum=-5.021;VQSLOD=1.7034;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:27.62:0,28,602	0/0:8,0:6:9.85:0,10,38	0/0:62,0:19:37.50:0,37,404	0/0:73,0:26:27.57:0,28,497	0/1:19,0:16:12.37:12,0,28	0/1:15,0:12:3.15:3,0,21	0/1:17,0:13:4.55:5,0,23	0/1:30,1:29:14:70,0,14	0/1:9,0:4:8.03:10,0,8	1/1:7,24:26:47.51:634,48,0	1/1:2,9:10:23.80:281,24,0	0/0:9,0:6:1.01:0,1,8	0/1:12,0:9:9.21:15,0,9	0/0:12,0:8:8.47:0,8,26	0/1:23,0:15:0.94:1,0,22	0/1:6,0:6:3.71:23,0,4	0/0:29,0:28:52.17:0,52,744	0/1:20,0:14:9.90:10,0,46	0/1:14,0:12:8.73:22,0,9	0/1:17,0:14:7.27:7,0,39	0/1:32,0:27:17.25:26,0,17	0/1:11,0:9:11.10:11,0,19	0/1:14,0:9:11:27,0,11	0/0:33,0:27:27.89:0,28,91	0/1:20,0:15:16.40:16,0,20	0/1:24,0:22:4.19:4,0,22	0/1:22,0:20:2.33:23,0,2	0/0:14,0:13:15.07:0,15,56
chr10	94833805	.	GTGTGTGTGT	G	3012.22	PASS	AB=0.946;AC=27;AF=0.482;AN=56;BaseQRankSum=3.857;DP=610;FS=8.776;HRun=0;HaplotypeScore=158.1064;InbreedingCoeff=-0.5199;MQ=52.13;MQ0=74;MQRankSum=-1.952;QD=7.01;ReadPosRankSum=3.368;VQSLOD=1.6430;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:17:16.77:0,17,322	0/1:8,0:6:21.75:22,0,28	0/0:60,0:17:32.58:0,33,274	0/0:71,0:24:33.50:0,34,284	0/1:15,3:15:27:119,0,27	0/1:14,0:11:45.92:109,0,46	0/1:16,3:15:44.78:59,0,45	0/1:31,0:27:40.01:130,0,40	0/1:10,3:7:62.01:93,0,62	0/1:34,0:26:43.92:44,0,810	0/1:11,0:10:44.13:44,0,145	0/1:10,0:7:22.25:50,0,22	0/1:10,1:8:4.89:135,0,5	0/1:11,3:8:25.30:65,0,25	0/1:23,0:13:35.80:153,0,36	1/1:5,1:6:7.66:205,8,0	0/0:28,0:26:59.31:0,59,1545	1/1:21,1:15:3.25:330,3,0	1/1:13,0:11:8.26:233,8,0	0/1:16,0:13:76.70:104,0,77	0/1:30,0:25:25.50:25,0,76	0/1:12,1:10:39.48:94,0,39	0/1:12,2:8:14.82:62,0,15	0/1:29,5:28:85.44:265,0,85	0/1:18,2:14:28.65:149,0,29	0/1:24,0:22:11.78:388,0,12	0/1:19,0:17:33.13:130,0,33	0/1:13,0:12:17.74:166,0,18
chr10	94833807	.	GTGTGTGT	G	2269.52	PASS	AB=0.978;AC=24;AF=0.429;AN=56;BaseQRankSum=6.730;DP=622;FS=9.483;HRun=0;HaplotypeScore=146.2847;InbreedingCoeff=-0.3405;MQ=48.79;MQ0=85;MQRankSum=-0.267;QD=5.93;ReadPosRankSum=5.055;VQSLOD=1.6973;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:18:33.19:0,33,493	0/0:8,0:6:0.06:0,0,107	0/0:60,0:16:32.84:0,33,462	0/0:72,0:22:38.77:0,39,444	0/1:18,0:15:14.10:14,0,168	0/1:15,0:11:47.41:47,0,181	0/1:19,0:15:17.72:18,0,174	0/1:28,0:24:25.51:26,0,265	0/1:13,0:7:61.88:62,0,82	0/0:37,0:27:58.17:0,58,1168	0/0:12,0:10:15.94:0,16,247	0/1:10,0:7:33.35:33,0,82	0/1:9,1:7:54.93:110,0,55	0/1:14,0:8:42.12:42,0,106	0/1:22,0:12:76.92:77,0,177	0/1:7,0:7:31.29:114,0,31	0/0:28,0:26:62.34:0,62,1539	0/1:23,0:15:28.16:202,0,28	1/1:11,2:11:15.63:303,16,0	0/1:13,6:14:59.52:111,0,60	0/1:32,1:27:10.61:101,0,11	0/1:13,0:10:46.35:46,0,140	0/1:14,0:8:10.55:11,0,85	0/1:33,1:28:99:158,0,287	0/1:24,0:17:99:112,0,128	1/1:18,6:22:30.37:538,30,0	1/1:16,1:15:8.88:219,9,0	0/1:13,0:12:95.01:95,0,97
chr10	94833835	.	GT	G	1316.84	PASS	AB=0.824;AC=22;AF=0.393;AN=56;BaseQRankSum=6.066;DP=588;FS=9.947;HRun=2;HaplotypeScore=104.0805;InbreedingCoeff=-0.4025;MQ=37.74;MQ0=107;MQRankSum=0.073;QD=3.39;ReadPosRankSum=1.167;VQSLOD=-0.4283;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,6:17:34.09:34,0,163	0/1:8,3:9:17.87:18,0,186	0/0:23,1:4:6.32:0,6,55	0/0:41,2:3:3.01:0,3,39	0/1:16,4:17:92.61:93,0,224	0/1:14,6:15:36.07:36,0,177	0/0:19,4:19:9.29:0,9,312	0/1:28,2:22:11.76:12,0,560	0/0:16,1:11:22.10:0,22,274	0/0:29,0:19:51.07:0,51,675	0/0:10,0:8:17.53:0,18,220	0/1:10,2:8:20.17:20,0,156	0/1:6,3:6:53.29:53,0,72	0/1:11,4:9:17.34:17,0,191	0/1:19,5:15:88.92:89,0,237	0/1:10,3:12:90.01:90,0,145	0/0:35,0:32:83.99:0,84,1159	0/1:13,11:16:99:201,0,119	0/1:17,3:13:66.32:66,0,203	0/1:18,4:15:11.49:32,0,11	0/1:30,3:24:25.44:25,0,29	0/1:10,3:8:30.77:62,0,31	0/0:14,4:12:1.42:0,1,223	0/1:29,10:31:95.34:95,0,317	0/1:16,5:13:91.87:92,0,157	0/1:21,1:16:99:205,0,173	1/1:7,3:7:13.79:113,14,0	1/1:6,3:7:12.01:127,12,0
chr10	94833836	.	T	TG	1501.18	PASS	AB=0.914;AC=23;AF=0.411;AN=56;BaseQRankSum=5.890;DP=580;FS=11.200;HRun=1;HaplotypeScore=101.9704;InbreedingCoeff=-0.4584;MQ=37.56;MQ0=107;MQRankSum=0.793;QD=3.71;ReadPosRankSum=0.637;VQSLOD=-0.7445;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,1:18:34.09:34,0,159	0/1:10,1:9:17.87:18,0,178	0/0:23,0:4:6.32:0,6,55	0/0:42,0:3:3.01:0,3,39	0/1:18,2:17:92.57:93,0,216	0/1:16,1:12:59.49:59,0,171	0/1:22,2:20:14.12:14,0,284	0/1:28,0:21:17.46:17,0,517	0/0:15,2:11:21.92:0,22,273	0/0:29,0:19:51.15:0,51,661	0/0:10,0:8:17.99:0,18,224	0/1:11,2:9:20.17:20,0,150	0/1:8,1:6:57.41:57,0,70	0/1:14,1:9:17.34:17,0,186	0/1:17,4:12:88.92:89,0,220	0/1:13,0:12:88:88,0,143	0/0:35,0:33:83.28:0,83,1098	0/1:19,4:15:99:210,0,116	0/1:20,0:13:85.88:86,0,206	0/1:21,1:15:22.59:30,0,23	0/1:30,0:24:25.32:25,0,29	0/1:9,2:8:31.02:62,0,31	0/0:16,2:12:1.42:0,1,223	0/1:37,1:32:99:118,0,305	0/1:18,2:13:91.87:92,0,146	0/1:19,1:14:99:230,0,164	1/1:8,1:6:13.81:133,14,0	1/1:4,5:7:12.04:170,12,0
chr10	94833850	.	ATGTGTGTG	A	1413.28	PASS	AB=0.847;AC=13;AF=0.260;AN=50;BaseQRankSum=1.902;DP=541;FS=14.007;HRun=0;HaplotypeScore=145.9715;InbreedingCoeff=0.6658;MQ=41.57;MQ0=77;MQRankSum=-4.554;QD=10.02;ReadPosRankSum=0.301;VQSLOD=1.6991;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:18:22.25:0,22,194	0/0:15,0:13:29.72:0,30,592	./.	./.	0/0:21,0:20:36.08:0,36,953	0/0:15,0:14:24.05:0,24,456	0/0:28,0:28:51.17:0,51,1284	1/1:35,0:26:24.93:360,25,0	0/0:18,0:15:15.80:0,16,687	0/0:19,0:17:23.02:0,23,313	0/1:7,0:8:4.71:5,0,232	0/0:17,0:14:27.09:0,27,627	0/1:5,0:6:13.67:14,0,235	0/0:17,0:13:22.07:0,22,551	0/0:18,0:11:20.10:0,20,592	0/0:14,0:14:21.54:0,22,546	0/0:38,0:38:89:0,89,2249	0/0:20,0:18:28.26:0,28,483	1/1:8,6:9:17.09:388,17,0	1/1:7,12:15:18.06:400,18,0	1/1:18,14:26:5.88:117,6,0	0/0:8,0:6:6.02:0,6,143	0/0:19,0:16:39.12:0,39,868	0/0:39,0:35:53.96:0,54,1221	0/0:20,0:12:23.82:0,24,443	0/1:16,1:12:10.86:101,0,11	1/1:8,0:6:14.62:197,15,0	./.
chr10	94835567	.	T	TTG	6302.65	PASS	AB=0.742;AC=40;AF=0.714;AN=56;BaseQRankSum=0.181;DP=621;FS=1.017;HRun=0;HaplotypeScore=133.1137;InbreedingCoeff=0.5832;MQ=61.66;MQ0=4;MQRankSum=-1.903;QD=14.13;ReadPosRankSum=2.112;VQSLOD=5.0252;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:47.06:0,47,468	1/1:4,5:9:24.07:358,24,0	0/0:41,0:23:18.96:0,19,180	0/0:28,0:22:48.11:0,48,531	1/1:5,6:11:12.04:188,12,0	0/1:10,9:18:9.09:358,0,9	0/1:16,6:22:33.29:419,0,33	1/1:18,0:20:30.19:271,30,0	1/1:12,5:18:33.05:465,33,0	0/0:24,0:24:57.06:0,57,629	0/0:14,0:15:23.90:0,24,266	0/1:13,4:18:51.79:158,0,52	1/1:8,5:12:18:277,18,0	1/1:8,10:18:24.07:362,24,0	1/1:4,3:7:12.03:167,12,0	1/1:4,6:10:6.02:96,6,0	0/0:34,0:32:72.11:0,72,811	1/1:15,9:24:45.03:591,45,0	1/1:15,0:20:24.65:192,25,0	1/1:5,1:12:3:26,3,0	1/1:24,5:61:24.01:244,24,0	0/1:8,5:12:11.69:132,0,12	1/1:10,6:17:3.91:227,4,0	1/1:23,22:45:33.03:466,33,0	1/1:15,12:27:11.89:611,12,0	1/1:20,0:26:45.54:379,46,0	1/1:7,0:14:15:132,15,0	1/1:5,0:16:20.99:182,21,0
chr10	94835616	.	CGTGT	C	336.28	PASS	AB=0.904;AC=15;AF=0.300;AN=50;BaseQRankSum=3.470;DP=540;FS=0.000;HRun=0;HaplotypeScore=116.5271;InbreedingCoeff=0.1573;MQ=34.34;MQ0=31;MQRankSum=-1.167;QD=2.03;ReadPosRankSum=3.296;VQSLOD=1.8204;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:13:3.01:34,3,0	0/0:8,1:9:2.90:0,3,41	0/0:20,0:4:9.03:0,9,167	0/0:41,0:7:14.94:0,15,156	./.	0/0:20,2:19:8.09:0,8,83	0/1:22,4:24:19.10:52,0,19	0/0:19,0:17:33.20:0,33,237	0/0:9,1:10:2.69:0,3,22	0/0:20,0:20:46.99:0,47,469	0/0:8,0:8:6.01:0,6,91	0/0:22,3:23:6.64:0,7,79	0/1:12,1:12:40.81:41,0,56	1/1:21,5:22:5.37:44,5,0	0/1:11,1:12:0:0,0,0	0/0:4,1:5:0:0,0,0	0/0:25,0:24:51.12:0,51,923	0/1:11,2:13:69.87:70,0,86	0/1:16,0:11:5.19:5,0,63	./.	0/0:82,1:64:0.99:0,1,71	./.	1/1:11,2:10:2.92:17,3,0	0/0:47,1:39:0.88:0,1,2	0/0:9,0:9:8.91:0,9,66	0/1:16,1:15:37.43:76,0,37	1/1:5,1:6:11.50:94,11,0	0/1:6,1:8:20.72:42,0,21
chr10	94835618	.	T	TGC	491.36	PASS	AB=0.999;AC=23;AF=0.426;AN=54;BaseQRankSum=2.819;DP=535;FS=4.259;HRun=0;HaplotypeScore=110.1757;InbreedingCoeff=-0.0491;MQ=34.17;MQ0=32;MQRankSum=-0.016;QD=1.40;ReadPosRankSum=-0.609;VQSLOD=1.9623;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,1:13:5.98:72,6,0	0/0:9,0:9:7.92:0,8,86	0/0:17,0:3:9.03:0,9,137	0/0:40,0:6:11.15:0,11,142	1/1:8,0:8:2.97:20,3,0	0/1:22,0:19:46.13:46,0,86	0/1:27,0:25:23.04:82,0,23	0/0:18,0:16:17.85:0,18,284	0/1:9,0:9:15.33:29,0,15	0/1:19,0:19:0.38:0,0,267	0/0:8,0:8:6.01:0,6,71	0/1:24,0:22:4.11:4,0,102	0/1:13,0:12:31.60:54,0,32	1/1:25,1:22:8.80:61,9,0	0/0:12,0:12:0:0,0,0	0/0:5,0:5:0:0,0,0	0/0:25,0:24:53.97:0,54,741	0/1:14,0:14:5.79:6,0,79	0/1:17,0:11:40.21:40,0,97	./.	0/1:85,1:66:14.08:14,0,79	1/1:15,1:16:2.98:21,3,0	0/1:13,0:10:6.03:6,0,12	0/0:46,0:37:0.39:0,0,1	0/1:9,0:9:31.02:31,0,71	0/1:17,0:15:52.53:104,0,53	1/1:6,0:6:8.49:46,8,0	0/1:10,0:10:1.68:2,0,86
chr10	94835622	.	TGTGTGTGC	T	403.62	PASS	AB=0.981;AC=15;AF=0.300;AN=50;BaseQRankSum=3.370;DP=521;FS=1.701;HRun=0;HaplotypeScore=120.0999;InbreedingCoeff=0.1525;MQ=33.54;MQ0=33;MQRankSum=-1.636;QD=2.39;ReadPosRankSum=1.305;VQSLOD=2.4026;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:11:2.74:12,3,0	0/0:8,0:8:6.74:0,7,142	0/0:17,0:3:9.03:0,9,239	0/0:37,0:6:13.20:0,13,146	./.	0/0:19,1:17:7.51:0,8,197	0/1:30,0:28:48.28:48,0,146	0/0:17,0:15:36.92:0,37,443	0/0:9,0:9:2.59:0,3,47	0/0:18,0:18:23.42:0,23,701	0/0:9,0:9:6.01:0,6,92	0/0:23,0:21:14.71:0,15,234	0/1:12,1:12:11.46:11,0,134	1/1:25,1:22:5.87:44,6,0	0/1:11,0:11:0:0,0,0	0/0:4,1:5:3.01:0,3,40	0/0:25,0:24:56.77:0,57,1544	0/1:15,0:15:68.54:69,0,290	0/1:17,0:11:3.37:3,0,103	./.	0/0:83,2:66:0.73:0,1,262	./.	1/1:13,0:10:3.01:40,3,0	0/0:46,0:37:2.87:0,3,50	0/0:6,1:7:9.03:0,9,213	0/1:15,1:14:99:161,0,161	1/1:5,0:5:12.03:131,12,0	0/1:8,0:8:23.41:23,0,41
chr10	94835626	.	T	TGTGTGC	2190.50	PASS	AB=0.887;AC=36;AF=0.720;AN=50;BaseQRankSum=2.197;DP=510;FS=0.718;HRun=0;HaplotypeScore=112.6051;InbreedingCoeff=0.2070;MQ=33.53;MQ0=35;MQRankSum=-1.144;QD=5.48;ReadPosRankSum=-1.129;VQSLOD=2.1622;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:9:3.01:33,3,0	1/1:8,1:9:9.89:110,10,0	0/0:16,0:3:8.66:0,9,67	0/0:34,0:5:3.01:0,3,65	./.	1/1:19,0:16:8.37:92,8,0	1/1:28,3:29:20.52:183,21,0	0/1:16,0:14:24.26:257,0,24	1/1:7,0:7:2.76:24,3,0	0/1:10,0:17:99:237,0,116	0/0:2,0:9:3.01:0,3,37	0/1:21,0:19:2.82:199,0,3	1/1:11,1:11:1.09:86,1,0	0/1:16,9:22:0.32:0,0,0	1/1:6,5:12:2.59:10,3,0	1/1:5,0:5:3:25,3,0	0/0:26,0:25:57.09:0,57,927	0/1:17,0:17:8.15:279,0,8	1/1:13,0:7:4.75:26,5,0	./.	1/1:82,1:65:14.94:152,15,0	./.	1/1:11,0:9:0.47:1,0,0	1/1:43,0:41:14.84:140,15,0	1/1:6,1:7:9.03:142,9,0	1/1:15,1:14:21.08:241,21,0	1/1:5,0:5:1.48:14,1,0	0/1:7,0:8:14.97:81,0,15
chr10	94835668	.	CGTGCGTGTGTGTGTGTGCGT	C	1815.02	PASS	AB=1.000;AC=14;AF=0.280;AN=50;BaseQRankSum=-0.905;DP=444;FS=7.958;HRun=0;HaplotypeScore=166.4351;InbreedingCoeff=0.4826;MQ=42.07;MQ0=15;MQRankSum=-4.728;QD=12.02;ReadPosRankSum=-0.758;VQSLOD=1.6653;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:12:8.04:0,8,200	0/0:9,0:8:15.95:0,16,456	0/0:18,0:3:6.02:0,6,68	./.	0/0:6,0:6:9:0,9,223	0/0:16,0:15:30.05:0,30,989	0/1:26,0:24:98.78:99,0,468	1/1:4,11:15:23.56:464,24,0	0/0:12,0:12:12.02:0,12,332	0/1:13,0:13:62.92:92,0,63	./.	0/0:21,0:20:2.42:0,2,569	0/0:12,0:10:5.96:0,6,44	0/0:18,0:16:15.38:0,15,263	0/0:7,0:7:9.03:0,9,264	./.	0/0:25,0:25:57.17:0,57,2601	0/0:29,0:29:11.36:0,11,2137	1/1:8,0:6:6.02:111,6,0	0/0:1,5:6:2.99:0,3,24	1/1:48,0:43:5.90:83,6,0	0/0:15,0:15:11.89:0,12,526	0/0:9,0:9:9.03:0,9,354	0/0:50,0:49:45.05:0,45,1709	0/1:12,0:12:2.07:2,0,481	0/1:19,0:17:0.85:603,0,1	1/1:5,0:5:12.03:298,12,0	1/1:4,1:5:11.99:221,12,0
chr10	94835672	.	C	CGT	5625	PASS	AB=0.659;AC=43;AF=0.827;AN=52;BaseQRankSum=-1.525;DP=478;FS=14.939;HRun=0;HaplotypeScore=83.3084;InbreedingCoeff=0.3789;MQ=42.97;MQ0=21;MQRankSum=0.492;QD=14.20;ReadPosRankSum=1.122;VQSLOD=3.7611;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:12:6.02:0,6,75	0/1:6,4:9:6.69:205,0,7	0/0:18,0:3:6.01:0,6,65	./.	1/1:4,2:6:6.02:99,6,0	1/1:7,9:15:18.75:419,19,0	1/1:7,23:28:33.11:543,33,0	1/1:15,0:15:20.83:195,21,0	1/1:5,8:13:9.03:149,9,0	1/1:8,4:12:26.75:306,27,0	./.	0/1:9,14:22:13.48:322,0,13	1/1:5,5:9:6.02:99,6,0	1/1:12,4:14:12.04:170,12,0	1/1:7,1:8:9.03:141,9,0	1/1:4,0:4:3.01:43,3,0	0/0:26,0:27:55.48:0,55,601	1/1:9,23:33:49.16:1040,49,0	1/1:8,0:6:5.86:35,6,0	1/1:6,0:6:0.89:2,1,0	1/1:52,0:41:2.81:33,3,0	0/1:7,9:16:25.74:136,0,26	1/1:4,11:15:8.54:148,9,0	1/1:20,36:55:45.15:742,45,0	1/1:5,10:15:21.07:347,21,0	1/1:17,0:18:30.50:297,30,0	1/1:3,0:5:8.61:75,9,0	1/1:2,0:4:8.93:80,9,0
chr10	94835682	.	T	TGC	2778.86	PASS	AB=0.978;AC=29;AF=0.518;AN=56;BaseQRankSum=2.538;DP=503;FS=14.274;HRun=0;HaplotypeScore=96.6086;InbreedingCoeff=-0.3352;MQ=43.33;MQ0=27;MQRankSum=1.176;QD=6.83;ReadPosRankSum=7.657;VQSLOD=1.4301;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:13:12.01:0,12,139	0/1:8,0:8:33.24:84,0,33	0/0:23,0:2:6.02:0,6,68	0/0:23,0:5:5.48:0,5,32	0/1:6,0:6:35.09:35,0,57	0/1:18,0:17:25.04:179,0,25	0/1:34,0:32:68.86:235,0,69	1/1:14,0:13:4.97:302,5,0	0/1:13,0:13:19.20:64,0,19	1/1:11,0:12:8.95:169,9,0	1/1:5,0:8:2.84:14,3,0	0/1:18,0:17:55.27:164,0,55	0/1:10,0:9:35.01:35,0,48	0/1:14,0:12:45.19:63,0,45	0/1:7,0:8:34.97:53,0,35	0/1:4,0:4:9.51:10,0,41	0/0:28,0:28:69.05:0,69,903	0/1:36,0:37:50.29:474,0,50	0/1:9,0:5:23.20:28,0,23	0/0:6,0:6:2.96:0,3,19	1/1:44,11:41:5.89:82,6,0	0/1:15,0:15:56.03:59,0,56	0/1:14,0:14:34.41:63,0,34	1/1:58,0:55:4.95:347,5,0	1/1:17,0:17:20.64:175,21,0	0/1:14,5:17:37.09:203,0,37	0/1:4,1:5:7.45:58,0,7	0/1:6,0:6:46.41:46,0,54
chr10	94835684	.	TGC	T	291.01	PASS	AB=0.993;AC=13;AF=0.232;AN=56;BaseQRankSum=6.493;DP=500;FS=18.334;HRun=0;HaplotypeScore=102.4194;InbreedingCoeff=0.1655;MQ=43.61;MQ0=26;MQRankSum=-6.099;QD=2.39;ReadPosRankSum=-2.321;VQSLOD=0.5930;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:13:14.03:0,14,170	0/0:7,1:8:2.69:0,3,146	0/0:22,0:2:6.01:0,6,64	0/1:23,0:4:4.09:4,0,17	0/0:6,0:6:13.82:0,14,133	0/1:18,1:18:14.45:14,0,258	0/0:34,0:32:33.44:0,33,400	0/1:13,0:12:13.78:14,0,113	0/0:12,0:12:11.94:0,12,141	1/1:13,2:13:17.63:162,18,0	1/1:8,0:8:3:25,3,0	0/0:18,0:17:29.17:0,29,294	0/0:10,0:9:11.21:0,11,85	0/0:14,0:12:19.03:0,19,141	0/0:9,0:9:17.25:0,17,194	0/0:4,0:4:8.21:0,8,57	0/0:27,0:27:51.66:0,52,1035	0/0:36,0:37:72.33:0,72,763	0/1:8,0:4:22.15:22,0,34	1/1:6,0:6:3.01:39,3,0	0/0:55,1:41:17.59:0,18,118	0/0:15,0:15:15.04:0,15,201	0/0:14,0:14:14.89:0,15,163	0/0:59,0:55:32.81:0,33,507	0/0:17,0:17:19.22:0,19,193	0/1:19,0:17:84.12:95,0,84	0/1:5,0:5:28.04:45,0,28	0/1:6,0:6:23.39:23,0,52
chr10	94835692	.	CGTGTGT	C	261.31	PASS	AB=0.833;AC=3;AF=0.054;AN=56;BaseQRankSum=4.352;DP=544;FS=1.025;HRun=0;HaplotypeScore=138.5922;InbreedingCoeff=0.3130;MQ=45.96;MQ0=33;MQRankSum=-4.969;QD=10.05;ReadPosRankSum=-1.812;VQSLOD=2.5902;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:14:16.85:0,17,336	0/0:8,0:8:2.82:0,3,472	0/0:20,0:4:6:0,6,54	0/0:20,0:6:7.99:0,8,148	0/0:7,0:7:18.05:0,18,430	0/0:18,0:17:42.13:0,42,1017	0/0:31,0:30:48.18:0,48,996	0/0:16,0:14:30.92:0,31,447	0/0:15,0:15:21:0,21,468	0/1:16,3:15:16.29:320,0,16	1/1:3,3:6:3.01:32,3,0	0/0:16,0:15:24.08:0,24,654	0/0:14,0:13:21.29:0,21,278	0/0:15,0:13:27.01:0,27,541	0/0:8,0:8:18.06:0,18,513	0/0:5,0:5:12.03:0,12,204	0/0:30,0:29:75.16:0,75,1945	0/0:42,0:43:86.92:0,87,2412	0/0:11,0:8:22.49:0,22,223	0/0:8,0:7:5.67:0,6,36	0/0:63,2:50:25.45:0,25,288	0/0:15,0:15:18.02:0,18,534	0/0:15,0:15:17.70:0,18,472	0/0:59,0:56:69.13:0,69,1765	0/0:20,0:20:25.78:0,26,602	0/0:18,0:18:15.97:0,16,442	0/0:5,0:5:15:0,15,176	0/0:7,0:7:17.84:0,18,235
chr10	94835714	.	C	CGT	453.78	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.417;DP=630;FS=2.319;HRun=0;HaplotypeScore=127.9821;InbreedingCoeff=0.7119;MQ=55.12;MQ0=27;MQRankSum=1.441;QD=20.63;ReadPosRankSum=-1.598;VQSLOD=3.7539;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,17:18:33.11:548,33,0	0/0:7,0:7:14.94:0,15,188	0/0:37,0:21:57.47:0,57,658	0/0:34,0:22:39.85:0,40,556	0/0:10,0:10:27.09:0,27,340	0/0:19,0:18:45.12:0,45,540	0/0:29,0:28:47.76:0,48,603	0/0:28,0:25:53.26:0,53,637	0/0:19,0:19:32.97:0,33,386	0/0:23,0:19:46.12:0,46,488	0/0:8,0:8:8.81:0,9,112	0/0:17,0:16:30.10:0,30,375	0/0:15,0:14:29.83:0,30,376	0/0:12,0:11:23.96:0,24,302	0/0:11,0:11:24.08:0,24,303	0/0:8,0:8:18.06:0,18,227	0/0:41,0:40:96.27:0,96,1189	0/0:45,0:45:99:0,102,1204	0/0:25,0:21:46.63:0,47,518	0/0:12,0:11:15.05:0,15,189	0/0:63,0:49:0.56:0,1,481	0/0:20,0:20:36.11:0,36,443	0/0:14,0:14:24.08:0,24,303	0/0:62,0:59:44.34:0,44,997	0/0:18,0:18:29.93:0,30,373	0/0:18,0:17:45.14:0,45,555	0/0:4,0:4:12:0,12,133	0/0:8,0:8:18.06:0,18,226
chr10	94837253	.	GCTTTCTTTCTTTCTTT	G	4036.76	PASS	AB=1.000;AC=33;AF=0.635;AN=52;BaseQRankSum=2.218;DP=489;FS=1.415;HRun=0;HaplotypeScore=263.3537;InbreedingCoeff=0.5240;MQ=61.70;MQ0=4;MQRankSum=-3.907;QD=13.24;ReadPosRankSum=-0.229;VQSLOD=2.4382;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:18.03:340,18,0	0/0:9,0:12:9.01:0,9,159	./.	./.	0/0:13,0:16:27.05:0,27,538	1/1:16,3:19:18.06:548,18,0	1/1:16,0:15:9.03:136,9,0	0/0:31,0:29:19.29:0,19,121	0/0:23,0:23:24.04:0,24,512	0/1:23,0:23:10.98:11,0,82	0/1:13,0:13:37.19:70,0,37	1/1:10,4:14:21.03:624,21,0	1/1:9,0:9:3.01:77,3,0	1/1:13,6:19:1.93:358,2,0	0/0:22,0:22:27.08:0,27,671	0/0:12,0:13:24.08:0,24,666	0/0:18,0:29:7.56:0,8,70	0/1:32,0:32:53.52:54,0,986	1/1:15,5:20:10.33:239,10,0	1/1:11,1:12:9.03:218,9,0	1/1:12,0:12:2.74:12,3,0	1/1:12,0:12:3.01:59,3,0	1/1:9,0:9:6.02:113,6,0	1/1:25,1:26:5.21:135,5,0	0/0:11,0:11:9:0,9,161	1/1:13,1:14:1.03:198,1,0	1/1:10,5:15:20.86:668,21,0	1/1:7,0:14:12.04:178,12,0
chr10	94837338	.	CCTT	C	341.17	PASS	AB=0.981;AC=6;AF=0.107;AN=56;BaseQRankSum=5.851;DP=498;FS=0.000;HRun=0;HaplotypeScore=167.7276;InbreedingCoeff=0.5942;MQ=44.56;MQ0=11;MQRankSum=-3.222;QD=5.02;ReadPosRankSum=-2.766;VQSLOD=2.3115;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:49.82:0,50,2030	0/0:9,0:9:27.09:0,27,601	0/0:32,0:6:18.06:0,18,405	0/0:33,0:9:18.95:0,19,396	0/0:27,0:27:76.84:0,77,1609	0/0:18,0:18:48.72:0,49,1064	0/0:25,0:24:65.48:0,65,1535	0/0:21,0:20:54.18:0,54,1149	0/0:8,0:8:19.62:0,20,431	1/1:0,6:6:18.06:245,18,0	1/1:1,6:5:12.04:145,12,0	0/0:15,0:15:40.15:0,40,839	0/0:10,0:10:30.10:0,30,715	0/0:14,0:14:27:0,27,735	0/0:11,0:11:32.84:0,33,702	0/0:14,0:14:28.77:0,29,706	0/1:30,0:30:29.90:30,0,1615	0/1:24,1:25:52.53:53,0,1176	0/0:14,0:13:28.60:0,29,827	0/0:14,0:14:38.82:0,39,699	0/0:12,0:12:32.88:0,33,784	0/0:18,0:18:11.74:0,12,877	0/0:13,0:13:28.50:0,29,560	0/0:16,0:15:36.12:0,36,801	0/0:23,0:22:66.05:0,66,1233	0/0:18,0:18:53.21:0,53,1174	0/0:14,0:14:37.30:0,37,818	0/0:13,0:13:39.08:0,39,859
chr10	94837341	.	T	TC	154.20	PASS	AB=0.905;AC=6;AF=0.107;AN=56;BaseQRankSum=6.758;DP=516;FS=10.047;HRun=0;HaplotypeScore=155.9116;InbreedingCoeff=0.4418;MQ=44.81;MQ0=13;MQRankSum=-4.030;QD=2.06;ReadPosRankSum=-4.950;VQSLOD=0.4965;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,1:39:48.25:0,48,1179	0/0:9,0:9:27.09:0,27,375	0/0:36,0:6:18.06:0,18,251	0/0:33,0:9:17.65:0,18,247	0/0:28,0:28:75.17:0,75,992	0/0:17,0:17:38.35:0,38,618	0/0:25,0:24:66.20:0,66,920	0/0:23,0:21:60.08:0,60,766	0/0:8,0:8:6.47:0,6,229	1/1:6,0:7:17.85:136,18,0	1/1:10,0:8:3.59:87,4,0	0/0:15,0:15:25.61:0,26,462	0/0:10,0:10:30.10:0,30,408	0/0:14,0:14:19.66:0,20,445	0/0:13,0:12:19.52:0,20,390	0/0:14,0:14:23.72:0,24,398	0/1:29,3:32:18.87:19,0,948	0/1:23,2:26:35.95:36,0,668	0/0:14,0:14:38.92:0,39,515	0/0:15,0:15:34.53:0,35,448	0/0:12,0:12:34.36:0,34,463	0/0:19,0:19:0.38:0,0,491	0/0:14,0:14:5.59:0,6,346	0/0:16,0:15:36.03:0,36,458	0/0:24,0:22:66.18:0,66,844	0/0:17,0:17:51.17:0,51,694	0/0:14,0:14:23.42:0,23,473	0/0:12,0:12:36.12:0,36,502
chr10	94837358	.	T	TCC	894.65	PASS	AB=0.832;AC=15;AF=0.268;AN=56;BaseQRankSum=7.775;DP=530;FS=12.055;HRun=0;HaplotypeScore=151.0621;InbreedingCoeff=-0.3687;MQ=44.39;MQ0=11;MQRankSum=-4.584;QD=3.79;ReadPosRankSum=1.204;VQSLOD=1.9857;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:88.82:0,89,1526	0/1:5,2:8:50.07:75,0,50	0/0:30,0:5:15.02:0,15,217	0/0:25,0:7:14.88:0,15,224	0/1:26,5:31:61.77:62,0,375	0/1:17,2:19:25.80:26,0,214	0/0:29,0:28:76.82:0,77,544	0/0:25,0:23:52.67:0,53,349	0/1:9,2:11:63.69:64,0,75	0/0:9,0:9:26.60:0,27,203	0/0:15,0:13:32.52:0,33,245	0/1:11,2:13:53.17:53,0,145	0/0:17,1:18:22.50:0,23,302	0/1:7,3:10:65.97:76,0,66	0/1:8,4:11:47.73:158,0,48	0/1:11,2:13:39.06:39,0,125	0/0:29,0:29:87.29:0,87,1389	0/0:27,0:27:25.61:0,26,407	0/0:19,0:19:18.55:0,19,255	0/1:14,3:17:67.86:68,0,185	0/0:11,0:11:26.78:0,27,203	0/1:18,2:20:32.17:32,0,222	0/1:14,4:18:86.81:87,0,146	0/0:14,1:14:32.20:0,32,236	0/1:18,6:22:99:137,0,234	0/1:15,3:18:62.30:62,0,184	0/1:10,2:12:58.47:58,0,115	0/1:7,2:9:55.81:56,0,72
chr10	94837359	.	T	TTCCTTC	5574.64	PASS	AB=0.895;AC=25;AF=0.446;AN=56;BaseQRankSum=1.037;DP=529;FS=8.033;HRun=0;HaplotypeScore=171.5347;InbreedingCoeff=-0.7707;MQ=44.39;MQ0=11;MQRankSum=-1.036;QD=12.47;ReadPosRankSum=3.850;VQSLOD=3.0701;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:40:61.63:62,0,1052	0/1:5,3:8:1.75:263,0,2	0/0:28,0:5:15.05:0,15,255	0/0:25,0:7:15.05:0,15,229	0/1:25,5:30:99:412,0,203	0/1:17,2:19:99:262,0,113	0/1:29,0:28:99:119,0,190	0/1:25,0:23:26.62:27,0,129	0/1:9,2:11:26.86:254,0,27	0/1:10,0:10:17.43:17,0,119	0/1:15,0:13:90.96:91,0,105	0/1:11,1:13:85.96:230,0,86	0/1:17,1:18:80.24:271,0,80	0/1:7,2:10:33.61:263,0,34	0/1:8,4:11:68.30:368,0,68	0/1:11,2:13:69.18:232,0,69	0/0:29,0:29:87.27:0,87,1887	0/1:27,0:27:99:161,0,203	0/1:20,0:20:99:170,0,141	0/1:14,3:17:73.98:371,0,74	0/1:11,0:11:11.81:12,0,85	0/1:18,2:20:99:323,0,134	0/1:14,3:18:99:351,0,114	0/1:15,1:15:25.12:25,0,123	0/1:18,6:22:99:573,0,120	0/1:15,3:18:99:297,0,111	0/1:10,2:12:93.08:238,0,93	0/1:7,2:9:49.98:181,0,50
chr10	94837382	.	T	TCCTTCCTT	13720.69	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=2.467;DP=495;FS=1.760;HRun=0;HaplotypeScore=145.6016;InbreedingCoeff=0.8123;MQ=47.01;MQ0=10;MQRankSum=-2.115;QD=29.89;ReadPosRankSum=-1.230;VQSLOD=4.2964;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:29.57:573,30,0	1/1:7,0:7:21.06:556,21,0	0/0:7,0:4:3.01:0,3,30	0/1:12,0:4:0.14:0,0,0	1/1:32,0:32:59.45:1090,59,0	1/1:17,0:17:36.04:697,36,0	1/1:25,0:24:53.82:669,54,0	1/1:28,0:25:41.16:300,41,0	1/1:11,0:11:21.02:518,21,0	1/1:14,0:13:21.05:194,21,0	1/1:19,0:17:33.80:428,34,0	1/1:11,0:11:18.04:407,18,0	1/1:17,0:17:39.04:582,39,0	1/1:13,0:13:20.99:477,21,0	1/1:10,0:9:17.98:615,18,0	1/1:11,0:11:23.94:408,24,0	0/0:29,0:29:51.03:0,51,1292	1/1:29,0:29:44.83:543,45,0	1/1:16,0:14:31.01:355,31,0	1/1:24,0:23:27.12:778,27,0	1/1:13,0:13:20.95:245,21,0	1/1:19,0:19:41.95:731,42,0	1/1:14,5:20:31.88:722,32,0	1/1:21,0:20:14.98:169,15,0	1/1:25,0:22:48.03:1153,48,0	1/1:14,0:14:36.03:705,36,0	1/1:10,0:10:20.82:433,21,0	1/1:6,0:6:15.02:371,15,0
chr10	94837510	.	T	TACAC	1484.86	PASS	AB=0.828;AC=30;AF=0.625;AN=48;BaseQRankSum=-4.909;DP=442;FS=20.644;HRun=0;HaplotypeScore=97.9814;InbreedingCoeff=0.4106;MQ=65.02;MQ0=8;MQRankSum=2.358;QD=5.67;ReadPosRankSum=0.638;VQSLOD=0.7981;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:26:3:0,3,28	./.	./.	./.	0/0:7,0:11:3:0,3,28	1/1:18,2:21:3.01:70,3,0	1/1:15,4:18:3.01:70,3,0	1/1:24,0:24:2.29:6,2,0	0/0:6,0:9:9:0,9,84	1/1:17,1:18:21.09:241,21,0	0/1:13,0:13:31.51:32,0,37	1/1:16,0:16:14.96:151,15,0	1/1:6,0:5:5.99:48,6,0	1/1:7,3:11:3.01:70,3,0	0/0:10,0:15:9.01:0,9,84	0/0:7,0:11:3:0,3,28	0/0:20,0:19:10.60:0,11,147	0/0:19,0:19:1.53:0,2,4	./.	1/1:16,0:14:2.95:65,3,0	1/1:24,0:24:9.03:174,9,0	1/1:10,0:10:4.17:52,4,0	1/1:11,0:11:2.60:10,3,0	0/1:19,16:39:30.67:264,0,31	0/0:7,0:13:9.01:0,9,84	1/1:18,0:18:15.47:205,15,0	1/1:9,0:9:9.01:129,9,0	1/1:6,0:6:3.48:53,3,0
chr10	94838016	.	CTG	C	14492.73	PASS	AB=0.938;AC=49;AF=0.875;AN=56;BaseQRankSum=3.701;DP=529;FS=1.667;HRun=0;HaplotypeScore=114.7021;InbreedingCoeff=0.7976;MQ=65.39;MQ0=1;MQRankSum=-1.742;QD=31.37;ReadPosRankSum=4.693;VQSLOD=6.8868;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.23:0,66,1169	1/1:0,5:5:9.03:123,9,0	0/0:20,0:17:34.70:0,35,481	0/1:14,1:11:27.80:28,0,233	1/1:2,19:21:39.13:536,39,0	1/1:2,23:25:53.72:741,54,0	1/1:0,20:20:48.16:660,48,0	1/1:0,19:19:57.14:730,57,0	1/1:1,14:15:30.10:412,30,0	1/1:4,18:22:51.17:700,51,0	1/1:2,18:20:33.02:564,33,0	1/1:0,21:21:57.19:783,57,0	1/1:1,10:11:30.10:408,30,0	1/1:2,21:23:51.17:701,51,0	1/1:1,23:24:54.18:742,54,0	1/1:1,21:21:54.18:742,54,0	0/0:23,0:23:66.20:0,66,1130	1/1:0,15:15:36.12:495,36,0	1/1:2,21:23:57.19:778,57,0	1/1:2,19:21:54.17:723,54,0	1/1:1,5:6:9.03:124,9,0	1/1:2,20:22:51.17:701,51,0	1/1:2,22:24:50.77:700,51,0	1/1:1,14:15:36.12:494,36,0	1/1:1,19:20:51.14:701,51,0	1/1:4,20:24:69.23:940,69,0	1/1:1,21:22:60.18:804,60,0	1/1:3,4:7:12.04:165,12,0
chr10	94838053	.	T	TGAGTGTCCAGGGAAGCCA	36721.46	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-4.700;DP=607;FS=1.488;HRun=0;HaplotypeScore=309.8615;InbreedingCoeff=0.9834;MQ=72.95;MQ0=2;MQRankSum=-16.238;QD=154.94;ReadPosRankSum=-4.905;VQSLOD=3.4961;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:69.14:0,69,3080	0/0:4,0:4:6.02:0,6,205	0/0:29,0:25:63.17:0,63,2119	0/0:23,0:20:41.47:0,41,1547	0/0:14,0:14:36.11:0,36,1416	0/0:21,0:21:47.68:0,48,2254	0/0:24,0:24:63.22:0,63,2905	1/1:41,0:41:99:5560,102,0	0/0:13,0:13:33.11:0,33,1646	1/1:15,10:27:66.21:4494,66,0	1/1:17,5:22:54.19:2889,54,0	0/0:21,0:21:63.22:0,63,3044	0/0:20,0:20:54.19:0,54,2466	0/0:18,0:18:51.18:0,51,2419	0/0:22,0:22:57.20:0,57,2941	0/0:22,0:21:60.21:0,60,2837	0/0:20,0:20:60.18:0,60,2963	0/0:11,0:11:30.10:0,30,1474	1/1:23,3:26:72.22:3596,72,0	1/1:15,14:30:81.28:5616,81,0	1/1:19,3:23:33.11:1281,33,0	0/0:15,0:15:39.13:0,39,1882	0/0:22,0:22:56.86:0,57,2638	0/0:18,0:18:51.17:0,51,2124	0/0:26,0:26:75.12:0,75,3483	1/1:17,11:30:84.24:5418,84,0	1/1:11,14:27:81.28:5682,81,0	1/1:7,3:11:30.10:2186,30,0
chr10	94838117	.	A	ATGAAGC	2794.72	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.013;DP=540;FS=17.904;HRun=0;HaplotypeScore=160.4242;InbreedingCoeff=0.9302;MQ=91.99;MQ0=1;MQRankSum=-8.756;QD=75.53;ReadPosRankSum=-1.311;VQSLOD=2.6105;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,30:36:90.31:2890,90,0	0/0:4,0:4:9.03:0,9,208	0/0:25,0:25:66.19:0,66,1416	0/0:24,0:24:53.48:0,53,1000	0/0:12,0:12:27.09:0,27,622	0/0:10,0:10:27.09:0,27,630	0/0:20,0:20:57.20:0,57,1323	0/0:25,0:25:69.23:0,69,1535	0/0:10,0:10:30.09:0,30,654	0/0:15,0:15:42.14:0,42,922	0/0:7,0:7:18.06:0,18,419	0/0:22,0:22:63.19:0,63,1377	0/0:26,0:26:75.26:0,75,1712	0/0:17,0:17:51.18:0,51,1188	0/0:29,0:29:75.26:0,75,1707	0/0:16,0:16:45.14:0,45,998	0/0:33,0:33:87.30:0,87,2002	0/0:9,0:9:21.07:0,21,490	0/0:19,0:19:57.12:0,57,1186	0/0:13,0:13:24.07:0,24,505	0/0:36,0:36:69.23:0,69,1583	0/0:19,0:19:51.18:0,51,1182	0/0:19,0:19:42.13:0,42,929	0/0:24,0:24:69.24:0,69,1567	0/0:24,0:24:69.20:0,69,1514	0/0:14,0:14:39.13:0,39,887	0/0:17,0:17:48.16:0,48,1119	0/0:14,0:14:33.11:0,33,758
chr10	94838783	.	CTG	C	22279.10	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=6.704;DP=727;FS=0.365;HRun=0;HaplotypeScore=127.0888;InbreedingCoeff=0.9985;MQ=87.59;MQ0=0;MQRankSum=-7.757;QD=37.13;ReadPosRankSum=3.308;VQSLOD=6.7268;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,2458	1/1:0,7:7:21.07:300,21,0	0/0:25,0:25:63.22:0,63,1131	0/0:30,0:30:84.20:0,84,1391	1/1:0,17:17:36.08:493,36,0	1/1:0,21:21:60.20:859,60,0	1/1:2,29:31:75.25:1074,75,0	1/1:1,29:30:84.27:1185,84,0	1/1:0,28:28:78.26:1118,78,0	1/1:2,29:31:87.25:1208,87,0	1/1:2,27:29:75.25:1075,75,0	1/1:4,25:29:75.25:1074,75,0	1/1:4,15:19:39.13:559,39,0	1/1:3,22:25:54.18:773,54,0	1/1:1,34:35:96.32:1376,96,0	1/1:1,22:23:66.15:902,66,0	0/0:27,0:27:78.27:0,78,1430	1/1:1,26:27:72.24:1032,72,0	1/1:5,16:21:48.15:669,48,0	1/1:2,25:27:72.16:985,72,0	1/1:1,37:38:99:1505,105,0	1/1:0,24:24:60.16:836,60,0	1/1:1,17:18:48.16:680,48,0	1/1:1,40:41:99:1590,111,0	1/1:1,19:20:54.18:766,54,0	1/1:1,19:20:60.15:802,60,0	1/1:3,27:30:72.23:1031,72,0	1/1:0,9:9:27.09:387,27,0
chr10	94838786	.	TG	T	2693.08	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=14.253;DP=713;FS=1.956;HRun=1;HaplotypeScore=179.3202;InbreedingCoeff=0.7122;MQ=87.82;MQ0=0;MQRankSum=-7.769;QD=4.62;ReadPosRankSum=6.907;VQSLOD=0.4209;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,2229	1/1:7,0:7:14.26:41,14,0	0/0:23,0:23:69.09:0,69,1025	0/0:32,0:32:86.82:0,87,1204	1/1:18,0:18:25.37:84,25,0	1/1:22,0:22:19.01:91,19,0	1/1:30,0:30:17.34:108,17,0	0/1:33,0:33:58.12:97,0,58	1/1:28,0:28:52.96:151,53,0	1/1:31,0:31:15.82:131,16,0	1/1:28,0:28:17.45:108,17,0	1/1:26,1:27:29.84:126,30,0	1/1:15,0:15:26.48:75,26,0	1/1:22,1:23:37.13:107,37,0	1/1:34,0:34:65.19:186,65,0	1/1:22,0:22:46.69:158,47,0	0/0:28,0:28:84.24:0,84,1308	1/1:26,0:26:48.89:139,49,0	1/1:16,0:16:33.55:112,34,0	1/1:25,1:26:51.31:172,51,0	1/1:37,0:37:71.30:203,71,0	1/1:25,0:25:8.19:94,8,0	0/1:18,0:18:3.65:52,0,4	1/1:40,0:40:75.36:215,75,0	1/1:20,0:20:0.29:61,0,0	1/1:19,1:20:31.11:141,31,0	1/1:27,1:28:49.84:161,50,0	1/1:9,0:9:18.33:52,18,0
chr10	94839593	.	CAT	C	467.83	PASS	AB=0.903;AC=7;AF=0.140;AN=50;BaseQRankSum=3.735;DP=271;FS=3.255;HRun=0;HaplotypeScore=44.4689;InbreedingCoeff=0.4132;MQ=66.80;MQ0=1;MQRankSum=-0.029;QD=9.95;ReadPosRankSum=0.564;VQSLOD=2.5278;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:33.11:0,33,537	0/1:5,1:6:19.48:19,0,230	./.	0/0:11,0:9:11.24:0,11,118	0/0:17,0:17:39.12:0,39,644	1/1:0,12:12:33.11:413,33,0	1/1:0,4:4:12.04:150,12,0	0/0:27,0:27:66.23:0,66,1076	0/0:1,0:1:3.01:0,3,50	0/0:18,0:17:45.15:0,45,741	0/1:11,1:12:10.42:10,0,369	0/0:4,0:4:9.03:0,9,148	0/0:4,0:4:6.02:0,6,99	0/0:3,0:3:9.03:0,9,147	0/0:5,0:5:12.04:0,12,197	0/0:4,0:4:12.04:0,12,198	0/0:7,0:7:18.06:0,18,288	0/0:2,0:18:45.03:0,45,421	0/0:16,0:16:39.13:0,39,635	0/0:11,0:11:27.09:0,27,446	0/0:7,0:7:15.05:0,15,248	./.	0/0:3,0:3:9.03:0,9,149	./.	0/0:12,0:12:30.10:0,30,489	0/0:19,1:20:16.62:0,17,775	0/1:12,1:13:4.42:4,0,462	0/0:15,0:15:45.15:0,45,743
chr10	94839660	.	GT	G	2089.46	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=2.957;DP=328;FS=0.546;HRun=5;HaplotypeScore=59.2705;InbreedingCoeff=0.9264;MQ=57.87;MQ0=0;MQRankSum=-2.020;QD=27.14;ReadPosRankSum=0.536;VQSLOD=3.5618;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.18:0,54,734	0/0:5,0:5:15.05:0,15,205	./.	0/0:3,0:3:8.91:0,9,69	0/0:21,0:21:60.20:0,60,822	0/0:18,0:17:48.10:0,48,613	0/0:5,0:5:12.04:0,12,164	0/0:25,0:25:72.20:0,72,964	0/0:4,0:4:9.03:0,9,123	0/0:15,0:15:42.12:0,42,534	0/0:18,0:18:48.16:0,48,650	0/0:7,0:7:18.02:0,18,235	0/0:9,0:9:27.09:0,27,366	0/0:8,0:8:24.08:0,24,328	0/0:8,0:8:24.07:0,24,313	0/0:9,0:9:27.09:0,27,369	0/0:17,0:17:51.16:0,51,681	0/0:19,0:19:48.16:0,48,654	1/1:3,19:22:57.15:637,57,0	1/1:2,6:8:18.05:209,18,0	1/1:1,2:3:9.03:102,9,0	./.	0/0:5,0:5:15.05:0,15,205	0/0:3,0:3:9.03:0,9,119	0/0:18,0:18:51.16:0,51,697	1/1:3,23:26:34.25:772,34,0	1/1:2,16:18:48.13:536,48,0	0/0:12,0:12:33.11:0,33,449
chr10	94839723	.	T	TCCTC	24895.80	PASS	AB=0.531;AC=47;AF=0.839;AN=56;BaseQRankSum=-6.003;DP=423;FS=4.285;HRun=0;HaplotypeScore=74.6893;InbreedingCoeff=0.8542;MQ=79.96;MQ0=0;MQRankSum=-6.346;QD=70.13;ReadPosRankSum=3.466;VQSLOD=7.3198;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.14:0,57,1009	1/1:2,2:4:6:163,6,0	0/0:21,0:21:60.19:0,60,1088	0/0:8,0:8:18.06:0,18,345	1/1:1,18:22:57.20:1535,57,0	1/1:2,13:15:42.14:1109,42,0	1/1:2,12:14:36.12:943,36,0	1/1:8,20:29:84.27:2195,84,0	1/1:1,9:11:30.10:820,30,0	1/1:0,21:21:63.22:1725,63,0	1/1:1,15:17:39.13:1031,39,0	1/1:1,10:13:30.10:813,30,0	1/1:1,9:11:30.10:820,30,0	1/1:2,9:11:33.11:898,33,0	1/1:1,11:12:36.08:918,36,0	1/1:0,11:12:30.10:818,30,0	0/0:19,0:19:57.17:0,57,1057	0/1:2,14:17:6.99:1219,0,7	1/1:5,16:21:60.18:1509,60,0	1/1:3,5:8:15.05:405,15,0	1/1:3,9:13:21.07:528,21,0	1/1:0,7:8:21.07:575,21,0	1/1:0,11:11:33.11:901,33,0	1/1:0,10:10:21.54:574,22,0	1/1:0,13:13:36.12:964,36,0	1/1:6,19:25:71.64:1815,72,0	1/1:3,24:27:66.23:1802,66,0	1/1:1,9:10:30.10:817,30,0
chr10	94839778	.	AATATAT	A	2951.54	PASS	AB=1.000;AC=22;AF=0.407;AN=54;BaseQRankSum=-2.899;DP=299;FS=0.635;HRun=0;HaplotypeScore=115.5083;InbreedingCoeff=0.3563;MQ=72.51;MQ0=6;MQRankSum=-1.594;QD=17.36;ReadPosRankSum=2.803;VQSLOD=3.2711;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:27.50:0,27,632	0/0:1,0:1:2.90:0,3,16	0/0:12,0:10:19.56:0,20,147	0/0:17,0:10:17.60:0,18,282	0/0:9,0:9:0.47:0,0,1	0/0:13,0:13:6.02:0,6,109	0/1:13,0:13:40.78:41,0,110	1/1:7,17:22:47.95:899,48,0	0/1:14,0:14:16.32:16,0,304	1/1:4,2:7:12.04:246,12,0	1/1:4,0:4:3.01:69,3,0	0/1:15,0:15:8.71:9,0,283	0/0:2,0:2:6:0,6,55	0/1:9,0:9:8.77:9,0,47	0/0:15,0:15:1.39:0,1,340	0/0:9,0:9:14.97:0,15,198	0/0:13,0:13:36.12:0,36,1055	0/1:10,0:10:50.24:50,0,168	1/1:7,2:12:21.06:327,21,0	./.	1/1:10,0:15:19.95:341,20,0	0/0:6,0:6:3:0,3,25	0/0:3,0:3:3.01:0,3,53	0/1:10,0:10:11.16:11,0,71	0/0:5,0:5:4.65:0,5,69	1/1:9,3:16:39.03:577,39,0	1/1:6,6:15:26.52:355,27,0	1/1:1,4:5:11.78:180,12,0
chr10	94839822	.	T	TGTGTGC	3560.18	PASS	AB=0.710;AC=25;AF=0.481;AN=52;BaseQRankSum=3.756;DP=427;FS=11.039;HRun=0;HaplotypeScore=123.9245;InbreedingCoeff=0.6892;MQ=51.49;MQ0=6;MQRankSum=-4.051;QD=16.11;ReadPosRankSum=0.881;VQSLOD=2.1779;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:99:160,0,131	1/1:2,0:2:2.98:21,3,0	0/0:16,0:8:24.04:0,24,263	0/0:24,0:12:32.94:0,33,312	1/1:11,1:14:9:140,9,0	1/1:4,1:16:9.03:202,9,0	1/1:16,1:21:26.34:383,26,0	0/0:31,0:27:53.90:0,54,680	1/1:12,6:18:13.75:600,14,0	0/0:8,0:8:23.95:0,24,274	0/0:10,0:10:18.02:0,18,282	1/1:16,1:21:41.77:583,42,0	0/1:1,0:9:0.12:0,0,0	./.	1/1:0,13:14:18.06:650,18,0	1/1:14,2:15:24.66:296,25,0	0/0:17,0:17:32.29:0,32,737	0/1:5,2:15:76.78:173,0,77	0/0:17,0:17:42.83:0,43,446	0/0:5,0:5:11.97:0,12,109	0/0:21,0:21:33.03:0,33,328	./.	1/1:0,2:4:3.01:108,3,0	1/1:1,0:20:5.96:138,6,0	1/1:4,14:22:2.43:107,2,0	0/0:19,0:18:53.86:0,54,582	0/0:19,0:19:35.03:0,35,418	0/0:4,0:4:11.86:0,12,88
chr10	94839981	.	T	TC	8300.14	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=1.290;DP=541;FS=5.093;HRun=5;HaplotypeScore=141.0523;InbreedingCoeff=0.9914;MQ=83.80;MQ0=0;MQRankSum=-5.522;QD=32.94;ReadPosRankSum=2.735;VQSLOD=2.8402;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,99,1005	1/1:0,3:3:9.03:118,9,0	0/0:18,0:18:50.99:0,51,527	0/0:27,0:27:65.77:0,66,666	1/1:3,20:23:57.18:740,57,0	1/1:3,16:18:51.10:645,51,0	1/1:1,20:21:48.16:631,48,0	0/0:23,0:23:63.16:0,63,676	1/1:4,22:26:69.18:880,69,0	0/0:19,0:19:57.14:0,57,609	0/0:15,0:15:42.10:0,42,451	1/1:1,20:21:54.18:707,54,0	1/1:1,12:13:33.11:431,33,0	1/1:2,17:19:42.07:522,42,0	1/1:6,26:32:81.22:1039,81,0	1/1:2,10:11:27.09:353,27,0	0/0:23,0:23:66.10:0,66,681	1/1:0,10:9:30.10:395,30,0	0/0:18,0:18:39.10:0,39,419	0/0:15,0:15:45.07:0,45,478	0/0:27,0:27:75.19:0,75,806	1/1:3,13:16:39.13:512,39,0	1/1:0,12:12:36.03:446,36,0	1/1:1,15:16:45.04:568,45,0	1/1:1,8:9:24.08:312,24,0	0/0:30,0:30:81.20:0,81,870	0/0:19,0:19:57.14:0,57,612	0/0:14,0:14:42.11:0,42,451
chr10	94840479	.	G	GTT	1124.79	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=-1.598;DP=685;FS=3.412;HRun=5;HaplotypeScore=145.7933;InbreedingCoeff=0.5868;MQ=69.29;MQ0=2;MQRankSum=-3.963;QD=12.64;ReadPosRankSum=-2.789;VQSLOD=-0.5920;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,129,1606	0/0:10,0:10:15.92:0,16,53	0/0:28,0:23:50.99:0,51,612	0/0:21,0:19:40.82:0,41,437	0/0:26,0:26:49.27:0,49,164	0/0:23,0:23:46.62:0,47,149	0/0:23,0:23:31.08:0,31,99	0/0:28,0:28:34.57:0,35,220	0/0:32,0:32:48.99:0,49,156	1/1:10,13:27:42.65:576,43,0	1/1:14,7:25:53.37:639,53,0	0/0:26,0:26:38.30:0,38,133	0/0:19,0:19:27.37:0,27,90	0/0:21,0:21:42.46:0,42,137	0/0:19,0:17:28.86:0,29,92	0/0:23,0:23:37.74:0,38,120	0/0:27,0:27:69.21:0,69,876	0/0:24,0:24:39.20:0,39,125	0/0:24,0:24:13.58:0,14,263	0/1:20,0:20:29.50:37,0,29	0/0:23,0:23:27.06:0,27,169	0/0:20,0:20:31.99:0,32,114	0/0:24,0:24:28.82:0,29,102	0/0:25,0:25:42.73:0,43,138	0/0:29,0:29:53.46:0,53,206	0/0:27,0:26:23.73:0,24,114	0/0:27,0:26:0.12:0,0,93	0/1:17,0:17:4.65:5,0,39
chr10	94840483	.	TTG	T	3209.03	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=1.864;DP=674;FS=3.087;HRun=0;HaplotypeScore=132.2584;InbreedingCoeff=0.9866;MQ=68.24;MQ0=2;MQRankSum=-0.477;QD=8.14;ReadPosRankSum=1.004;VQSLOD=3.0844;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,2219	1/1:10,0:10:19.05:89,19,0	0/0:27,0:22:60.99:0,61,864	0/0:21,0:19:23.45:0,23,527	1/1:26,0:26:64.77:294,65,0	1/1:22,0:22:56.25:239,56,0	1/1:25,0:25:37.66:161,38,0	0/0:28,0:28:26.30:0,26,527	1/1:33,0:33:59.30:263,59,0	1/1:23,0:23:8.65:121,9,0	1/1:26,0:26:18.14:163,18,0	1/1:25,0:25:32.15:173,32,0	1/1:16,1:17:32.16:168,32,0	1/1:19,1:20:51.29:250,51,0	1/1:19,0:17:34.82:148,35,0	1/1:23,0:23:45.53:194,46,0	0/0:25,0:25:72.21:0,72,1172	1/1:23,1:24:50.08:241,50,0	0/0:22,0:22:19.88:0,20,476	0/0:21,0:21:54.55:0,55,463	0/0:21,0:21:45.56:0,46,458	1/1:22,0:22:20.70:126,21,0	1/1:25,0:25:24.27:152,24,0	1/1:22,2:24:51.68:284,52,0	1/1:29,1:30:58.74:372,59,0	0/0:26,0:25:31.53:0,32,442	0/0:26,0:25:44.03:0,44,454	0/0:16,0:16:47.92:0,48,390
chr10	94840484	.	TG	T	11404.65	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-1.043;DP=670;FS=6.401;HRun=1;HaplotypeScore=92.9122;InbreedingCoeff=0.9332;MQ=69.01;MQ0=2;MQRankSum=-0.505;QD=27.48;ReadPosRankSum=0.307;VQSLOD=4.3131;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,1749	1/1:0,10:10:21.07:289,21,0	0/0:27,1:23:37.89:0,38,636	0/0:20,1:19:13.66:0,14,375	1/1:0,25:25:72.14:938,72,0	1/1:0,22:22:63.21:878,63,0	1/1:0,25:25:42.14:585,42,0	0/0:28,0:28:36.64:0,37,275	1/1:0,32:32:66.22:919,66,0	1/1:23,0:23:61.40:402,61,0	1/1:26,0:26:71.93:456,72,0	1/1:1,24:25:50.45:704,50,0	1/1:1,15:16:36.09:478,36,0	1/1:1,19:20:57.16:774,57,0	1/1:2,17:17:39.13:544,39,0	1/1:0,23:23:51.17:711,51,0	0/0:24,0:24:72.19:0,72,917	1/1:1,23:24:57.15:754,57,0	0/1:24,0:24:6.86:7,0,262	0/0:21,0:21:35.74:0,36,226	0/0:21,0:21:50.47:0,50,279	1/1:2,20:22:39.77:541,40,0	1/1:1,24:25:40.63:532,41,0	1/1:2,22:24:57.14:755,57,0	1/1:7,23:30:86.32:1137,86,0	0/0:24,0:23:50.35:0,50,238	0/0:26,0:25:52.33:0,52,260	0/0:16,0:16:44.40:0,44,210
chr10	94841039	.	C	CAGAGAG	156.94	PASS	AB=0.932;AC=7;AF=0.125;AN=56;BaseQRankSum=5.307;DP=432;FS=2.234;HRun=0;HaplotypeScore=110.6414;InbreedingCoeff=-0.1831;MQ=46.37;MQ0=17;MQRankSum=-4.806;QD=1.85;ReadPosRankSum=0.419;VQSLOD=2.2084;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.12:0,66,1152	0/1:1,1:2:43.07:82,0,43	0/0:34,0:8:14.94:0,15,298	0/0:32,0:12:26.74:0,27,657	0/0:10,0:9:8.73:0,9,92	0/0:16,0:16:3.01:0,3,70	0/0:28,0:27:21.97:0,22,354	0/0:26,0:25:68.16:0,68,1109	0/1:14,1:15:44.37:44,0,323	0/0:11,0:11:20.57:0,21,418	0/0:8,0:8:5.69:0,6,80	0/1:13,0:11:22.42:22,0,198	0/0:14,0:13:27.71:0,28,521	0/0:16,0:14:9.45:0,9,139	0/1:13,0:11:14.45:14,0,267	0/0:15,1:16:24.06:0,24,321	0/0:22,0:22:32.71:0,33,730	0/1:10,1:10:52.32:52,0,404	0/1:15,0:13:10.36:10,0,469	0/0:8,0:8:11.91:0,12,164	0/0:18,0:18:12.40:0,12,227	0/0:10,0:9:8.97:0,9,89	0/0:5,0:5:6.01:0,6,92	0/0:12,0:12:11.67:0,12,231	0/0:9,0:9:1.02:0,1,140	0/1:16,0:16:57.33:57,0,222	0/0:14,0:13:17.19:0,17,333	0/0:12,0:11:17.28:0,17,241
chr10	94841211	.	ATTAT	A	1250.72	PASS	AC=18;AF=0.409;AN=44;BaseQRankSum=1.540;DP=240;FS=1.923;HRun=0;HaplotypeScore=47.3686;InbreedingCoeff=0.6887;MQ=69.20;MQ0=3;MQRankSum=1.258;QD=12.14;ReadPosRankSum=1.702;VQSLOD=2.5452;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:17:21.02:0,21,300	./.	./.	0/0:10,0:5:2.88:0,3,15	0/0:5,0:5:6.02:0,6,142	0/0:18,0:19:33.03:0,33,656	0/0:6,0:6:6.02:0,6,143	1/1:30,4:33:12.04:186,12,0	./.	1/1:3,3:6:9.03:142,9,0	1/1:3,3:6:9.03:142,9,0	./.	0/0:3,0:3:3.01:0,3,49	0/0:3,0:3:6.02:0,6,137	0/0:3,0:3:3.01:0,3,71	0/0:5,0:5:3.01:0,3,71	0/0:18,0:19:27.09:0,27,516	0/0:14,0:15:27.09:0,27,607	1/1:8,4:11:9.03:142,9,0	1/1:6,5:11:15.05:236,15,0	1/1:1,4:5:9.03:142,9,0	./.	0/0:3,0:3:3.01:0,3,71	./.	0/0:8,0:8:5.98:0,6,91	1/1:5,3:8:9.03:142,9,0	1/1:5,3:7:6.02:94,6,0	1/1:7,6:11:12.04:189,12,0
chr10	94842959	.	T	TA	9313.39	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=0.503;DP=501;FS=2.707;HRun=10;HaplotypeScore=96.1641;InbreedingCoeff=0.7582;MQ=63.49;MQ0=0;MQRankSum=-3.040;QD=21.22;ReadPosRankSum=-1.447;VQSLOD=4.7050;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:35:47.75:0,48,576	1/1:4,7:11:24.03:241,24,0	0/0:8,0:7:0.85:0,1,9	0/1:10,0:8:7.48:7,0,62	1/1:8,22:30:69.03:694,69,0	1/1:4,9:13:27.07:288,27,0	1/1:5,10:15:33.96:345,34,0	1/1:10,20:30:57.86:576,58,0	1/1:2,9:11:27.07:288,27,0	1/1:9,15:24:42.10:441,42,0	1/1:2,16:18:36.09:383,36,0	1/1:7,14:21:27.06:282,27,0	1/1:3,7:11:27.01:267,27,0	1/1:7,8:15:28.94:302,29,0	1/1:4,13:17:42.06:433,42,0	1/1:4,14:18:45.10:472,45,0	0/0:19,0:19:50.92:0,51,419	1/1:4,7:11:29.98:288,30,0	1/1:11,11:22:48.03:469,48,0	1/1:8,22:31:72:738,72,0	1/1:3,4:8:17.86:165,18,0	1/1:9,8:17:8.27:260,8,0	1/1:5,8:14:29.97:303,30,0	1/1:4,9:13:24.01:244,24,0	1/1:15,17:32:54.01:537,54,0	1/1:3,12:15:39.09:408,39,0	1/1:2,22:24:60.14:637,60,0	1/1:1,7:8:24.01:246,24,0
chr10	94842996	.	C	CTTTT	12343.79	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=0.190;DP=554;FS=15.468;HRun=10;HaplotypeScore=128.1291;InbreedingCoeff=0.9756;MQ=66.42;MQ0=3;MQRankSum=-8.097;QD=27.61;ReadPosRankSum=-1.560;VQSLOD=1.4568;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:28:22.17:0,22,96	1/1:7,9:17:34.18:589,34,0	0/0:30,0:18:24.18:0,24,267	0/0:24,0:11:11.39:0,11,150	1/1:23,2:29:44.79:589,45,0	1/1:4,8:16:30.10:561,30,0	1/1:8,11:21:44.98:752,45,0	1/1:21,6:30:52.07:844,52,0	1/1:6,6:13:20:267,20,0	1/1:17,0:29:58.59:604,59,0	1/1:11,0:16:30.16:307,30,0	1/1:8,3:12:20.67:314,21,0	1/1:5,6:12:34.33:552,34,0	1/1:9,4:15:26.72:395,27,0	1/1:7,4:13:35.40:539,35,0	1/1:9,8:17:38.46:719,38,0	0/0:24,0:24:66.16:0,66,886	1/1:7,8:16:35.83:651,36,0	1/1:6,0:24:50.27:477,50,0	1/1:12,0:32:53.09:550,53,0	1/1:1,0:9:14.96:167,15,0	1/1:11,1:13:28.70:346,29,0	1/1:5,6:13:23.79:312,24,0	1/1:6,7:15:19.85:327,20,0	1/1:17,8:25:52.26:929,52,0	1/1:7,0:26:68.63:706,69,0	1/1:14,1:22:46.20:517,46,0	1/1:5,5:10:17.01:331,17,0
chr10	94844433	.	C	CAG	19977.71	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-8.753;DP=710;FS=1.568;HRun=0;HaplotypeScore=88.0490;InbreedingCoeff=0.9768;MQ=56.73;MQ0=26;MQRankSum=0.872;QD=34.93;ReadPosRankSum=0.262;VQSLOD=7.0466;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:90.22:0,90,1215	1/1:0,11:11:33.11:585,33,0	0/0:32,0:13:7.61:0,8,166	0/0:39,0:13:26.97:0,27,322	1/1:3,27:27:54.08:898,54,0	1/1:1,20:21:48.16:844,48,0	1/1:5,24:29:31.66:507,32,0	1/1:8,21:29:54.08:772,54,0	1/1:2,20:20:39.12:689,39,0	1/1:1,29:27:78.20:1263,78,0	1/1:0,16:15:45.15:781,45,0	1/1:2,16:18:33.11:576,33,0	1/1:5,14:18:36.12:635,36,0	1/1:2,13:15:36.12:633,36,0	1/1:2,21:24:48.16:829,48,0	1/1:1,18:21:39.13:669,39,0	0/0:28,0:28:81.22:0,81,1075	1/1:6,24:29:55.85:970,56,0	1/1:1,19:18:51.13:830,51,0	1/1:1,29:30:63.21:1079,63,0	1/1:2,29:30:60.16:973,60,0	1/1:4,25:31:69.23:1185,69,0	1/1:1,22:24:42.14:729,42,0	1/1:3,35:38:78.20:1340,78,0	1/1:3,20:22:48.16:849,48,0	1/1:1,25:28:81.22:1334,81,0	1/1:2,12:13:24.08:424,24,0	1/1:0,13:13:33.11:585,33,0
chr10	94844593	.	G	GACACACACACACACAC	2621.13	PASS	AB=0.979;AC=26;AF=0.565;AN=46;BaseQRankSum=-1.091;DP=500;FS=8.951;HRun=0;HaplotypeScore=196.3446;InbreedingCoeff=0.1353;MQ=58.27;MQ0=12;MQRankSum=-1.743;QD=7.80;ReadPosRankSum=-4.632;VQSLOD=-0.1000;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:9.46:9,0,285	./.	0/0:38,0:14:5.07:0,5,169	0/1:51,0:17:3.45:3,0,187	./.	1/1:16,0:15:12.49:312,12,0	1/1:15,0:14:2.99:24,3,0	0/1:46,0:42:99:157,0,605	1/1:6,5:12:2.96:19,3,0	0/1:20,0:20:99:247,0,462	0/1:12,0:12:41.03:41,0,52	1/1:21,0:20:24.07:723,24,0	1/1:6,0:6:9.03:358,9,0	1/1:10,0:9:12.04:389,12,0	./.	1/1:11,0:11:6:166,6,0	0/0:15,0:15:33.58:0,34,1452	1/1:5,0:5:9.01:119,9,0	0/0:17,0:15:26.98:0,27,697	0/1:23,0:24:23.67:24,0,194	0/1:29,0:31:31.51:32,0,986	./.	1/1:9,0:9:1.61:22,2,0	0/0:11,0:11:0.47:0,0,1	./.	0/1:21,0:21:99:129,0,947	0/0:22,0:22:12.04:0,12,209	0/0:10,0:9:15.05:0,15,331
chr10	94844609	.	C	CACAG	5039.89	PASS	AB=0.983;AC=47;AF=0.870;AN=54;BaseQRankSum=2.826;DP=506;FS=8.716;HRun=0;HaplotypeScore=130.4972;InbreedingCoeff=0.4650;MQ=52.06;MQ0=17;MQRankSum=-0.655;QD=10.86;ReadPosRankSum=-1.131;VQSLOD=3.7196;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:20:16.47:119,16,0	./.	0/0:25,0:5:8.66:0,9,49	0/1:43,0:12:6.07:6,0,44	1/1:15,0:16:5.03:30,5,0	1/1:13,0:12:13.85:99,14,0	1/1:13,0:12:8.94:67,9,0	1/1:36,0:31:65.39:488,65,0	1/1:10,0:13:10.01:60,10,0	1/1:29,0:30:77.84:794,78,0	1/1:10,0:18:11.61:87,12,0	1/1:17,0:20:37.91:293,38,0	1/1:7,0:7:11.85:103,12,0	1/1:9,0:11:14.43:91,14,0	1/1:13,0:16:9.81:48,10,0	1/1:5,0:18:12.05:61,12,0	0/0:15,0:15:44.91:0,45,478	1/1:5,0:5:14.94:126,15,0	0/1:18,0:14:13.52:229,0,14	1/1:4,23:31:3.78:305,4,0	1/1:31,2:31:62.62:742,63,0	1/1:13,0:13:8.91:63,9,0	1/1:8,0:13:8.50:60,9,0	0/1:8,0:8:0:0,0,0	1/1:6,0:9:5.03:30,5,0	1/1:5,22:27:49.47:816,49,0	1/1:4,13:18:11.91:216,12,0	1/1:7,0:6:15.32:106,15,0
chr10	94846173	.	C	CTT	5018.22	PASS	AB=0.817;AC=28;AF=0.500;AN=56;BaseQRankSum=-7.627;DP=437;FS=10.921;HRun=10;HaplotypeScore=60.2492;InbreedingCoeff=0.7706;MQ=75.61;MQ0=1;MQRankSum=-1.905;QD=24.01;ReadPosRankSum=-1.674;VQSLOD=2.7908;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:82.18:0,82,1056	1/1:2,0:2:6.02:88,6,0	0/0:15,0:11:11.99:0,12,117	0/0:15,0:11:0.26:0,0,51	1/1:6,12:18:8.58:468,9,0	1/1:4,13:18:8.61:491,9,0	1/1:10,10:22:36.34:468,36,0	0/0:21,0:21:44.88:0,45,441	0/1:8,0:8:7.50:53,0,8	0/0:9,0:9:18.02:0,18,183	0/0:4,0:4:12.03:0,12,122	1/1:5,12:18:38.62:544,39,0	1/1:2,3:6:11.53:142,12,0	0/1:8,6:19:3.34:192,0,3	1/1:5,6:12:18.06:263,18,0	1/1:2,9:12:23.57:322,24,0	0/0:34,0:38:99:0,101,954	1/1:2,11:17:35.08:442,35,0	0/0:15,0:16:41.80:0,42,405	0/0:9,0:9:24.05:0,24,244	0/0:18,0:19:38.80:0,39,449	1/1:5,9:15:24.05:329,24,0	1/1:4,6:11:20.80:265,21,0	1/1:3,16:19:45.11:639,45,0	1/1:3,8:11:21.07:313,21,0	0/0:14,0:15:23.72:0,24,223	0/0:14,0:17:41.28:0,41,371	0/0:4,0:4:0.03:0,0,79
chr10	94847358	.	T	TA	22271.23	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=8.793;DP=686;FS=1.527;HRun=1;HaplotypeScore=104.4411;InbreedingCoeff=0.9987;MQ=89.85;MQ0=0;MQRankSum=-6.278;QD=41.24;ReadPosRankSum=5.315;VQSLOD=4.5813;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,165,2106	1/1:0,8:8:21.07:315,21,0	0/0:26,0:26:75.23:0,75,959	0/0:26,0:26:69.73:0,70,822	1/1:1,13:14:42.13:608,42,0	1/1:1,22:23:63.21:944,63,0	1/1:1,38:39:99:1663,111,0	1/1:1,13:14:39.12:565,39,0	1/1:1,19:20:51.17:764,51,0	1/1:0,23:23:69.19:1009,69,0	1/1:1,18:19:48.16:719,48,0	1/1:0,27:27:78.26:1168,78,0	1/1:0,23:23:63.21:943,63,0	1/1:0,25:25:72.24:1079,72,0	1/1:3,21:24:60.20:899,60,0	1/1:2,15:17:41.94:629,42,0	0/0:38,0:38:99:0,111,1439	1/1:0,20:20:57.19:854,57,0	1/1:0,14:14:42.14:630,42,0	1/1:1,17:18:45.15:674,45,0	1/1:3,47:50:99:1978,132,0	1/1:1,23:24:69.23:1034,69,0	1/1:0,12:12:33.11:495,33,0	1/1:0,41:41:99:1618,108,0	1/1:0,27:27:81.27:1214,81,0	1/1:0,17:18:54.18:807,54,0	1/1:2,22:24:66.22:989,66,0	1/1:0,16:16:45.15:674,45,0
chr10	94847650	.	A	AC	1285.70	PASS	AB=0.900;AC=19;AF=0.339;AN=56;BaseQRankSum=3.028;DP=388;FS=0.606;HRun=6;HaplotypeScore=47.9525;InbreedingCoeff=0.8516;MQ=80.32;MQ0=0;MQRankSum=0.009;QD=15.49;ReadPosRankSum=-0.732;VQSLOD=2.6589;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:75.15:0,75,757	0/0:8,0:8:24.05:0,24,245	0/0:12,0:12:33.05:0,33,325	0/1:16,1:18:9.16:9,0,239	0/0:12,0:12:33.06:0,33,328	0/0:11,0:10:27.06:0,27,274	0/0:28,0:28:78.17:0,78,794	1/1:6,4:10:12:133,12,0	0/0:19,0:19:57.11:0,57,574	1/1:0,3:3:6.02:75,6,0	1/1:0,6:6:6.02:75,6,0	0/0:22,0:22:48.07:0,48,476	0/0:16,0:16:36.07:0,36,360	0/0:19,0:19:41.88:0,42,409	0/0:16,0:16:45.10:0,45,459	0/0:14,0:14:39.08:0,39,398	0/0:29,0:29:72.15:0,72,734	0/0:16,0:16:45.10:0,45,458	1/1:0,7:7:21.06:249,21,0	1/1:2,5:7:12.04:144,12,0	1/1:5,12:17:27.07:327,27,0	0/0:10,0:10:24.05:0,24,244	0/0:10,0:10:21.03:0,21,209	0/0:18,0:18:45.07:0,45,451	0/0:14,0:14:27.06:0,27,275	1/1:0,8:8:20.68:247,21,0	1/1:0,6:6:15.05:189,15,0	1/1:0,1:1:3.01:38,3,0
chr10	94849614	.	AACCCTACT	A	12557.97	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.990;DP=736;FS=1.923;HRun=0;HaplotypeScore=191.4938;InbreedingCoeff=0.9999;MQ=80.53;MQ0=0;MQRankSum=-18.200;QD=70.55;ReadPosRankSum=0.629;VQSLOD=4.8524;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,156,6700	0/0:14,0:14:42.14:0,42,1842	0/0:25,0:25:65.55:0,66,2476	0/0:20,0:20:54.17:0,54,1816	0/0:31,0:31:93.32:0,93,4152	1/1:0,25:25:66.23:1929,66,0	1/1:0,20:20:51.18:1431,51,0	0/0:34,0:34:99:0,99,3862	0/0:40,0:40:99:0,120,5013	0/0:21,0:21:63.20:0,63,2454	0/0:19,0:19:57.18:0,57,2463	1/1:0,23:23:60.21:1739,60,0	1/1:1,27:28:69.24:2019,69,0	1/1:0,21:21:42.14:1214,42,0	0/0:29,0:29:87.30:0,87,3894	0/0:34,0:34:99:0,102,4407	0/0:20,0:19:60.18:0,60,2604	0/0:22,0:22:66.19:0,66,2744	0/0:26,0:26:72.25:0,72,2934	0/0:30,0:30:90.31:0,90,4028	0/0:38,0:38:99:0,114,5165	1/1:1,25:26:66.23:1897,66,0	1/1:1,14:15:42.14:1190,42,0	1/1:1,19:20:42.14:1140,42,0	0/0:24,0:24:72.25:0,72,3237	0/0:36,0:36:99:0,108,4805	0/0:32,0:32:96.33:0,96,4133	0/0:10,0:10:30.09:0,30,1239
chr10	94850292	.	GTGTT	G	1669.42	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.100;DP=609;FS=8.299;HRun=0;HaplotypeScore=99.5015;InbreedingCoeff=0.9650;MQ=86.87;MQ0=0;MQRankSum=-6.085;QD=50.59;ReadPosRankSum=-0.647;VQSLOD=4.4149;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.31:0,90,2441	0/0:9,0:9:27.09:0,27,715	0/0:29,0:28:78.26:0,78,1966	0/0:23,0:22:66.22:0,66,1631	0/0:12,0:12:30.07:0,30,751	0/0:21,0:21:57.20:0,57,1505	0/0:27,0:27:81.28:0,81,2185	0/0:22,0:22:66.23:0,66,1761	0/0:30,0:30:84.29:0,84,2272	1/1:1,25:26:75.23:1385,75,0	1/1:0,7:7:21.07:405,21,0	0/0:38,0:38:99:0,114,3037	0/0:29,0:29:87.30:0,87,2354	0/0:22,0:22:63.22:0,63,1677	0/0:26,0:26:75.26:0,75,2054	0/0:26,0:26:78.27:0,78,2096	0/0:43,0:43:99:0,123,3334	0/0:32,0:32:90.31:0,90,2436	0/0:9,0:9:24.08:0,24,642	0/0:4,0:4:9.03:0,9,246	0/0:38,0:38:99:0,111,3011	0/0:9,0:9:27.09:0,27,724	0/0:9,0:9:24.08:0,24,596	0/0:29,0:29:81.26:0,81,2116	0/0:15,0:15:45.15:0,45,1191	0/0:16,0:16:42.14:0,42,1139	0/0:19,0:19:57.20:0,57,1533	0/0:9,0:9:27.09:0,27,699
chr10	94851352	.	C	CGT	1397.57	PASS	AB=0.561;AC=3;AF=0.054;AN=56;BaseQRankSum=-6.853;DP=800;FS=10.114;HRun=0;HaplotypeScore=117.5217;InbreedingCoeff=0.5557;MQ=62.72;MQ0=4;MQRankSum=-0.306;QD=25.41;ReadPosRankSum=-1.395;VQSLOD=3.8452;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,114,1367	0/0:14,0:14:27.08:0,27,326	0/0:35,0:25:7.28:0,7,222	0/0:46,0:31:12.52:0,13,394	0/0:34,0:34:75.22:0,75,892	0/0:24,0:24:47.50:0,47,539	0/0:34,0:36:71.85:0,72,800	1/1:16,15:32:22.86:664,23,0	0/0:20,0:20:33.04:0,33,395	0/0:31,0:31:62.99:0,63,705	0/0:19,0:19:27.05:0,27,310	0/0:26,0:26:57.16:0,57,676	0/0:21,0:22:38.74:0,39,425	0/0:17,0:17:33.10:0,33,398	0/0:16,0:17:44.95:0,45,508	0/0:18,0:18:44.88:0,45,542	0/0:33,0:36:82.71:0,83,988	0/0:20,3:23:5.99:0,6,567	0/0:18,0:18:27.08:0,27,322	0/0:27,0:30:66.71:0,67,737	0/0:75,0:75:99:0,138,1663	0/0:26,0:27:48.13:0,48,567	0/0:14,0:15:39.01:0,39,450	0/0:26,0:26:51.15:0,51,613	0/0:23,0:23:60.18:0,60,723	0/0:35,0:35:66.20:0,66,795	0/0:23,0:23:45.12:0,45,530	0/1:5,18:23:42.27:838,0,42
chr10	94851410	.	CTCT	C	6077.09	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=3.560;DP=615;FS=1.646;HRun=0;HaplotypeScore=110.7625;InbreedingCoeff=0.9999;MQ=79.74;MQ0=1;MQRankSum=-3.670;QD=38.71;ReadPosRankSum=3.855;VQSLOD=6.1189;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,2615	0/0:13,0:13:39.13:0,39,839	0/0:18,0:17:37.94:0,38,835	0/0:28,0:26:51.03:0,51,956	0/0:28,0:28:75.26:0,75,1643	1/1:0,25:25:60.20:979,60,0	1/1:1,17:18:39.13:636,39,0	0/0:31,0:31:81.24:0,81,1742	0/0:16,0:16:45.15:0,45,1004	0/0:19,0:19:51.16:0,51,1072	0/0:16,0:16:42.11:0,42,887	1/1:0,18:18:48.16:783,48,0	1/1:2,14:16:42.14:686,42,0	1/1:2,19:21:48.16:783,48,0	0/0:15,0:15:45.15:0,45,995	0/0:17,0:17:48.16:0,48,1045	0/0:34,0:34:93.32:0,93,2044	0/0:21,0:21:57.19:0,57,1206	0/0:25,0:25:69.23:0,69,1481	0/0:17,0:17:51.11:0,51,1014	0/0:31,0:31:81.26:0,81,1748	1/1:0,20:20:60.12:913,60,0	1/1:2,16:18:42.14:681,42,0	1/1:1,20:21:39.13:616,39,0	0/0:20,0:20:60.21:0,60,1329	0/0:26,0:26:78.26:0,78,1673	0/0:23,0:23:60.18:0,60,1234	0/0:16,0:16:48.11:0,48,905
chr10	94851420	.	C	CT	4377.79	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-9.820;DP=615;FS=6.193;HRun=9;HaplotypeScore=94.2169;InbreedingCoeff=0.9943;MQ=76.24;MQ0=1;MQRankSum=0.310;QD=21.15;ReadPosRankSum=-3.304;VQSLOD=3.7273;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,2:46:80.77:0,81,930	0/0:12,0:12:29.98:0,30,257	0/0:21,0:20:34:0,34,264	0/0:20,0:19:32.56:0,33,256	0/0:23,0:24:65.01:0,65,552	0/0:25,0:26:65.01:0,65,547	0/0:17,0:17:38.97:0,39,336	1/1:7,23:30:66.10:698,66,0	0/0:15,0:15:35.99:0,36,313	1/1:4,0:19:39.86:204,40,0	1/1:2,0:16:34.58:192,35,0	0/0:19,0:19:47.99:0,48,415	0/0:18,0:18:47.97:0,48,415	0/0:18,0:18:44.99:0,45,390	0/0:16,0:16:38.98:0,39,339	0/0:19,0:19:53.98:0,54,469	0/0:35,0:35:95.98:0,96,833	0/0:19,0:19:47.98:0,48,417	1/1:6,20:27:63.12:669,63,0	1/1:1,24:25:60.13:651,60,0	1/1:11,18:28:50.81:539,51,0	0/0:21,0:21:47.97:0,48,414	0/0:19,0:20:40.80:0,41,342	0/0:20,0:20:33.46:0,33,286	0/0:19,1:20:11.79:0,12,331	1/1:9,18:28:59.96:623,60,0	1/1:2,18:20:51.13:555,51,0	1/1:4,8:13:23.90:246,24,0
chr10	94853819	.	C	CTGT	8555.19	PASS	AB=0.971;AC=32;AF=0.571;AN=56;BaseQRankSum=-4.985;DP=604;FS=358.595;HRun=0;HaplotypeScore=647.4158;InbreedingCoeff=-0.6785;MQ=56.68;MQ0=0;MQRankSum=-2.739;QD=14.16;ReadPosRankSum=-1.420;VQSLOD=-0.5437;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:2.13:446,0,2	0/1:14,2:17:2.62:291,0,3	0/1:8,3:16:18.71:245,0,19	0/1:5,2:10:1.83:150,0,2	0/1:37,0:37:56.18:435,0,56	0/1:18,0:18:17.92:291,0,18	1/1:27,0:27:1.32:567,1,0	0/1:19,0:19:6.06:268,0,6	0/1:29,0:29:36.70:237,0,37	0/1:33,0:33:4.93:533,0,5	0/1:19,0:19:44.74:151,0,45	0/1:31,0:31:63.26:511,0,63	0/1:20,0:20:34.25:217,0,34	0/1:27,0:27:6.45:451,0,6	0/1:26,0:26:14.08:434,0,14	0/1:21,0:21:46.98:222,0,47	0/1:17,0:17:30.86:274,0,31	1/1:8,0:8:11.93:158,12,0	0/1:18,0:18:88.24:138,0,88	0/1:22,1:23:20.54:432,0,21	0/1:17,0:17:38.69:134,0,39	0/1:28,0:28:37.61:308,0,38	0/1:23,0:23:32.14:210,0,32	0/1:15,0:15:9:142,0,9	1/1:26,2:28:15.25:469,15,0	0/1:19,0:19:52.59:267,0,53	0/1:28,2:30:28.76:466,0,29	1/1:6,0:6:11.21:106,11,0
chr10	94854007	.	TAC	T	8948.94	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=9.495;DP=709;FS=2.111;HRun=0;HaplotypeScore=94.6477;InbreedingCoeff=0.9987;MQ=85.42;MQ0=3;MQRankSum=-1.691;QD=35.65;ReadPosRankSum=2.389;VQSLOD=6.7511;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,49:49:99:1756,123,0	0/0:6,0:6:18.06:0,18,330	0/0:26,0:26:72.25:0,72,1275	0/0:26,0:26:75.12:0,75,1290	0/0:28,0:28:72.25:0,72,1308	1/1:0,18:18:54.14:751,54,0	1/1:2,28:30:78.26:1118,78,0	0/0:29,0:29:84.28:0,84,1501	0/0:31,0:31:90.31:0,90,1643	0/0:22,0:22:54.19:0,54,986	0/0:17,0:17:45.15:0,45,822	1/1:3,25:27:66.22:946,66,0	1/1:0,29:29:81.17:1160,81,0	1/1:1,19:20:45.11:622,45,0	0/0:33,0:33:96.33:0,96,1754	0/0:25,0:25:69.24:0,69,1258	0/0:39,0:39:99:0,114,2073	0/0:12,0:12:33.11:0,33,604	0/0:23,0:23:69.23:0,69,1213	0/0:19,0:19:54.16:0,54,957	0/0:37,0:37:99:0,108,1958	1/1:1,20:21:51.14:708,51,0	1/1:1,21:22:57.16:794,57,0	1/1:1,31:32:78.22:1095,78,0	0/0:20,0:20:57.19:0,57,1023	0/0:22,0:22:66.21:0,66,1179	0/0:29,0:29:84.29:0,84,1499	0/0:14,0:14:39.13:0,39,715
chr10	94854518	.	T	TG	11641.09	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.189;DP=708;FS=2.373;HRun=1;HaplotypeScore=85.1311;InbreedingCoeff=0.9995;MQ=91.95;MQ0=0;MQRankSum=-0.648;QD=41.13;ReadPosRankSum=1.745;VQSLOD=5.3993;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,50:51:99:2042,118,0	0/0:12,0:12:36.12:0,36,467	0/0:37,0:37:99:0,99,1248	0/0:22,0:22:62.65:0,63,723	0/0:16,0:16:48.16:0,48,622	1/1:1,24:25:75.25:1117,75,0	1/1:0,29:29:78.26:1168,78,0	1/1:2,25:27:75.25:1123,75,0	0/0:33,0:33:99:0,99,1284	0/0:25,0:25:69.22:0,69,896	0/0:8,0:8:24.06:0,24,290	1/1:1,23:24:57.19:854,57,0	1/1:1,25:26:75.25:1123,75,0	1/1:2,26:28:75.25:1122,75,0	0/0:27,0:27:81.26:0,81,1052	0/0:16,0:16:48.14:0,48,609	0/0:49,0:49:99:0,144,1853	0/0:26,0:26:78.25:0,78,1010	0/0:28,0:28:81.26:0,81,1052	0/0:21,0:20:60.18:0,60,764	0/0:31,0:31:93.30:0,93,1207	1/1:0,18:18:51.17:764,51,0	1/1:2,18:20:54.18:800,54,0	1/1:0,25:25:75.25:1124,75,0	0/0:20,0:20:54.18:0,54,701	0/0:26,0:26:72.23:0,72,924	0/0:28,0:28:84.23:0,84,1059	1/1:0,10:10:27.09:404,27,0
chr10	94854829	.	AG	A	4230.24	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=6.120;DP=476;FS=1.191;HRun=1;HaplotypeScore=42.4246;InbreedingCoeff=0.9644;MQ=47.84;MQ0=47;MQRankSum=2.489;QD=33.31;ReadPosRankSum=2.589;VQSLOD=4.4878;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:81.20:0,81,1244	0/0:9,0:9:27.09:0,27,430	0/0:19,0:1:2.98:0,3,21	./.	0/0:12,0:12:27.09:0,27,430	0/0:13,0:12:24.08:0,24,380	0/0:16,0:14:33.11:0,33,524	0/0:18,0:14:42.14:0,42,671	0/0:22,0:22:51.16:0,51,790	1/1:0,14:13:39.13:545,39,0	1/1:0,13:13:33.11:461,33,0	0/0:8,0:8:18.06:0,18,287	0/0:24,0:23:63.21:0,63,1002	0/0:10,0:10:21.07:0,21,335	0/0:24,0:21:51.16:0,51,791	0/0:21,0:21:54.18:0,54,862	0/0:16,0:15:24.08:0,24,383	0/0:19,0:17:36.12:0,36,564	1/1:1,20:15:42.14:584,42,0	1/1:0,13:13:36.12:503,36,0	1/1:1,29:28:66.22:923,66,0	0/0:12,0:12:30.10:0,30,478	0/0:12,0:11:27.09:0,27,426	0/0:24,0:23:57.15:0,57,882	0/0:11,0:11:33.11:0,33,527	1/1:0,17:16:48.16:671,48,0	1/1:0,19:15:39.13:544,39,0	0/0:11,0:11:27.09:0,27,431
chr10	94855508	.	AT	A	5283.82	PASS	AB=0.591;AC=29;AF=0.518;AN=56;BaseQRankSum=-7.216;DP=578;FS=1.485;HRun=11;HaplotypeScore=74.1477;InbreedingCoeff=0.9342;MQ=74.56;MQ0=1;MQRankSum=0.566;QD=18.47;ReadPosRankSum=5.775;VQSLOD=5.4632;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,114,1180	1/1:0,10:10:23.96:197,24,0	0/0:9,0:8:14.95:0,15,135	0/0:15,0:14:27.36:0,27,247	1/1:3,23:26:62.89:517,63,0	1/1:3,15:18:38.94:320,39,0	1/1:4,16:20:44.93:369,45,0	0/0:6,0:22:48.80:0,49,276	1/1:1,12:13:35.96:296,36,0	0/0:6,0:30:74.40:0,74,401	0/0:3,0:21:48.52:0,49,252	1/1:1,15:16:44.93:369,45,0	1/1:2,7:9:17.98:148,18,0	1/1:3,13:16:38.95:320,39,0	0/1:8,17:26:8.02:344,0,8	1/1:3,18:22:55.97:449,56,0	0/0:26,0:26:69.07:0,69,706	1/1:5,20:25:27.93:436,28,0	0/0:7,0:23:51.58:0,52,275	0/0:4,0:25:67.87:0,68,381	0/0:2,0:13:31.61:0,32,185	1/1:5,12:17:32.06:269,32,0	1/1:1,17:20:43.02:332,43,0	1/1:5,23:28:46.20:498,46,0	1/1:2,18:20:50.93:419,51,0	0/0:3,0:22:60.52:0,61,354	0/0:7,0:23:45.98:0,46,269	0/0:4,0:20:40.24:0,40,236
chr10	94856389	.	TTC	T	742.57	PASS	AB=0.973;AC=16;AF=0.286;AN=56;BaseQRankSum=13.336;DP=463;FS=1.394;HRun=0;HaplotypeScore=107.9174;InbreedingCoeff=-0.2680;MQ=66.96;MQ0=10;MQRankSum=-10.929;QD=3.69;ReadPosRankSum=4.713;VQSLOD=2.3453;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:1.90:2,0,510	1/1:12,0:12:3.03:58,3,0	0/0:46,0:10:3.57:0,4,102	0/0:59,0:22:21.87:0,22,175	0/1:16,0:16:32.97:75,0,33	0/1:10,1:11:20.58:71,0,21	0/1:7,0:7:12.42:51,0,12	0/0:26,0:26:55.75:0,56,586	0/1:14,0:14:61.16:92,0,61	0/0:13,0:13:36.54:0,37,355	0/0:13,0:13:36.99:0,37,358	0/1:10,2:12:59.62:90,0,60	0/1:8,1:9:24.12:56,0,24	0/1:12,0:12:19.84:58,0,20	0/1:14,0:14:37.59:73,0,38	0/1:9,0:9:20.64:21,0,63	0/0:17,0:17:33.88:0,34,462	0/0:19,0:19:27.32:0,27,495	0/0:16,0:15:11.20:0,11,296	0/0:10,0:10:20.65:0,21,133	0/0:4,0:4:0.29:0,0,79	0/1:17,0:17:27.22:27,0,141	0/1:20,1:21:6.62:107,0,7	0/1:8,0:8:33:33,0,43	0/1:15,0:15:15.64:80,0,16	0/0:10,0:10:1.94:0,2,159	0/0:19,0:19:38.71:0,39,537	0/0:10,0:10:18.89:0,19,171
chr10	94856391	.	CTT	C	2979.59	PASS	AB=0.931;AC=30;AF=0.536;AN=56;BaseQRankSum=8.118;DP=457;FS=0.000;HRun=15;HaplotypeScore=100.7837;InbreedingCoeff=0.8069;MQ=66.99;MQ0=10;MQRankSum=-10.884;QD=12.90;ReadPosRankSum=4.194;VQSLOD=2.8520;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,1:24:27.20:0,27,615	1/1:2,10:12:18.88:250,19,0	0/1:44,1:10:14.30:14,0,80	0/0:60,0:23:14.88:0,15,100	1/1:3,13:16:35.87:317,36,0	1/1:3,8:11:26.77:237,27,0	1/1:2,5:7:17.80:153,18,0	0/0:25,0:25:39.10:0,39,485	1/1:6,7:13:26.38:219,26,0	0/0:13,0:14:29.57:0,30,344	0/0:12,0:13:32.58:0,33,388	1/1:7,5:12:23.90:210,24,0	1/1:3,6:9:20.86:185,21,0	1/1:4,6:10:23.16:191,23,0	1/1:4,10:14:31.41:268,31,0	1/1:4,5:9:14.88:131,15,0	0/0:16,0:17:41.09:0,41,476	0/0:15,0:18:46.95:0,47,516	0/1:13,0:14:13.03:13,0,192	0/0:11,0:11:23.96:0,24,247	0/0:4,0:4:8.99:0,9,102	1/1:9,8:17:18.17:202,18,0	1/1:3,16:19:44.07:360,44,0	1/1:3,5:8:14.89:132,15,0	1/1:2,11:13:35.88:316,36,0	0/0:11,1:12:0.30:0,0,201	0/0:16,0:17:45.88:0,46,574	0/0:11,0:11:27.04:0,27,297
chr10	94856420	.	G	GA	5002.29	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=5.900;DP=416;FS=0.000;HRun=8;HaplotypeScore=103.5367;InbreedingCoeff=0.9662;MQ=81.38;MQ0=6;MQRankSum=-9.419;QD=25.78;ReadPosRankSum=1.396;VQSLOD=4.6450;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:68.21:0,68,602	1/1:2,10:12:33.10:380,33,0	0/0:50,0:26:36.35:0,36,291	0/0:52,0:26:21.82:0,22,170	1/1:6,13:19:42.09:469,42,0	1/1:5,8:13:30.04:322,30,0	1/1:3,3:6:9.03:103,9,0	0/0:14,0:14:27.01:0,27,247	1/1:4,8:12:30.09:345,30,0	0/0:6,0:6:18.01:0,18,165	0/0:5,0:5:15.01:0,15,136	1/1:2,8:10:27.01:285,27,0	1/1:2,5:7:15.04:171,15,0	1/1:4,7:11:24.06:263,24,0	1/1:2,9:11:29.45:317,29,0	1/1:1,6:7:18.05:208,18,0	0/0:17,0:18:53.07:0,53,473	0/0:23,0:23:53.99:0,54,487	1/1:4,3:7:11.83:104,12,0	1/1:3,7:10:18.05:208,18,0	1/1:0,4:4:12.04:138,12,0	1/1:4,5:9:21.04:228,21,0	1/1:5,14:19:48.12:533,48,0	1/1:0,5:5:11.74:130,12,0	1/1:1,11:14:38.91:414,39,0	0/0:10,0:10:21.01:0,21,192	1/1:6,12:18:33.10:381,33,0	0/0:11,0:11:32.61:0,33,285
chr10	94856434	.	G	GTT	2468.64	PASS	AB=0.863;AC=29;AF=0.518;AN=56;BaseQRankSum=7.449;DP=398;FS=1.868;HRun=14;HaplotypeScore=109.8227;InbreedingCoeff=0.5653;MQ=81.50;MQ0=8;MQRankSum=-7.653;QD=9.91;ReadPosRankSum=0.161;VQSLOD=2.5499;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:48.88:0,49,468	1/1:9,6:16:29.44:345,29,0	0/1:47,0:25:4.87:5,0,56	0/1:38,0:21:34.26:34,0,44	1/1:10,4:17:2.43:228,2,0	1/1:9,0:14:26.97:231,27,0	1/1:1,1:3:6.01:66,6,0	0/0:16,0:19:23.70:0,24,284	1/1:6,7:13:21.06:261,21,0	0/1:5,0:7:3.18:3,0,20	0/0:4,0:5:2.93:0,3,67	1/1:3,0:9:18.03:178,18,0	1/1:7,0:8:5.99:52,6,0	1/1:8,0:11:15.03:164,15,0	0/1:8,3:11:7.05:178,0,7	0/1:6,2:9:10.06:129,0,10	0/0:20,0:22:32.74:0,33,359	0/0:22,0:22:25.13:0,25,324	0/0:6,0:6:7.62:0,8,73	0/0:11,0:11:20.75:0,21,171	0/0:4,0:4:2.93:0,3,25	1/1:7,0:8:12.04:141,12,0	1/1:10,0:18:27.04:273,27,0	1/1:2,1:5:9.01:96,9,0	1/1:5,6:14:26.18:283,26,0	0/0:6,0:6:11.83:0,12,100	0/0:14,0:14:17.63:0,18,150	0/0:11,0:11:32.49:0,32,246
chr10	94856520	.	T	TGGGGCG	377.21	PASS	AC=10;AF=0.208;AN=48;BaseQRankSum=-1.899;DP=230;FS=8.297;HRun=0;HaplotypeScore=85.9496;InbreedingCoeff=0.6709;MQ=72.24;MQ0=1;MQRankSum=-0.776;QD=22.19;ReadPosRankSum=-1.821;VQSLOD=2.1632;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:39.13:0,39,831	0/0:13,0:13:27.09:0,27,377	0/0:10,0:8:14.91:0,15,216	0/0:10,0:9:2.92:0,3,34	0/0:6,0:6:3.01:0,3,42	0/0:9,0:9:15.05:0,15,209	0/0:21,0:21:33.11:0,33,448	./.	0/0:8,0:8:15.05:0,15,210	1/1:1,0:1:3:27,3,0	1/1:2,2:5:3.01:99,3,0	0/0:8,0:8:18.06:0,18,251	0/0:7,0:7:12.04:0,12,168	0/0:9,0:9:18.06:0,18,247	0/0:8,0:8:24.08:0,24,335	0/0:4,0:4:6.02:0,6,84	0/0:18,0:18:39.13:0,39,797	0/0:12,0:12:27.08:0,27,538	./.	1/1:4,0:4:3.01:56,3,0	./.	0/0:12,0:12:18.06:0,18,252	0/0:11,0:11:24.08:0,24,335	0/0:9,0:9:6.02:0,6,84	0/0:10,0:10:20.66:0,21,261	./.	1/1:4,1:5:9.01:147,9,0	1/1:1,1:2:6.02:181,6,0
chr10	94856526	.	GGGGGC	G	5054.10	PASS	AC=28;AF=0.519;AN=54;BaseQRankSum=6.803;DP=238;FS=21.386;HRun=0;HaplotypeScore=60.2478;InbreedingCoeff=0.8261;MQ=70.54;MQ0=1;MQRankSum=-10.157;QD=35.59;ReadPosRankSum=4.778;VQSLOD=2.8456;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.18:0,54,1519	1/1:2,10:12:27.09:556,27,0	0/0:9,0:7:18.06:0,18,385	0/0:10,0:9:20.94:0,21,267	1/1:0,9:9:3.01:62,3,0	1/1:2,9:11:15.05:309,15,0	1/1:3,15:18:33.11:680,33,0	0/0:3,0:3:3:0,3,28	1/1:0,8:8:21.03:365,21,0	0/0:1,0:1:3.01:0,3,54	0/0:5,0:5:9.01:0,9,120	1/1:0,8:8:21:389,21,0	1/1:1,6:7:12.04:247,12,0	1/1:1,11:12:18.06:371,18,0	1/1:0,8:8:24.08:494,24,0	1/1:1,3:4:6.02:124,6,0	0/0:18,0:18:48.16:0,48,1300	0/0:12,0:12:33.11:0,33,917	./.	0/0:4,0:4:8.95:0,9,69	0/0:4,0:4:5.95:0,6,46	1/1:2,11:13:18.06:371,18,0	1/1:0,10:10:24.08:495,24,0	1/1:0,10:10:6.91:125,7,0	1/1:0,12:12:26.94:467,27,0	0/0:5,0:5:11.99:0,12,212	0/0:4,0:4:9.03:0,9,217	0/0:2,0:2:6.02:0,6,132
chr10	94858891	.	AGTGTGTGTGTGTGTGT	A	1995.22	PASS	AB=0.958;AC=14;AF=0.250;AN=56;BaseQRankSum=7.172;DP=678;FS=0.000;HRun=0;HaplotypeScore=259.9191;InbreedingCoeff=0.2877;MQ=58.43;MQ0=12;MQRankSum=-1.289;QD=9.32;ReadPosRankSum=0.474;VQSLOD=2.1891;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:45:9.52:0,10,207	0/1:5,0:5:12.43:12,0,19	1/1:32,0:14:2.04:6,2,0	0/0:52,0:29:7.82:0,8,106	0/0:13,0:13:12:0,12,175	0/0:27,0:26:21.86:0,22,653	0/0:23,0:23:29.86:0,30,571	0/0:35,0:34:65.81:0,66,573	0/0:14,0:14:17.90:0,18,169	0/1:30,0:30:14.92:15,0,263	0/1:23,0:23:80.99:94,0,81	0/0:24,0:25:32.52:0,33,761	0/0:16,0:16:32.27:0,32,635	0/0:14,0:27:12.97:0,13,564	0/0:17,0:16:5.96:0,6,44	0/0:13,0:13:5.65:0,6,42	0/0:43,0:43:96.54:0,97,4261	0/0:28,0:26:63.09:0,63,3245	0/1:12,6:18:45.62:262,0,46	1/1:9,13:22:11.76:506,12,0	0/1:22,0:21:7.99:36,0,8	0/0:20,0:19:15.97:0,16,453	0/0:15,0:15:8.98:0,9,75	0/0:20,0:34:2.56:0,3,12	0/0:10,0:9:15.05:0,15,256	1/1:10,21:31:51.13:776,51,0	1/1:5,13:18:5.67:258,6,0	0/1:13,0:13:98.77:190,0,99
chr10	94858905	.	T	TGTGTGT	849.58	PASS	AB=1.000;AC=30;AF=0.577;AN=52;BaseQRankSum=0.914;DP=661;FS=8.879;HRun=0;HaplotypeScore=197.3911;InbreedingCoeff=0.3789;MQ=45.24;MQ0=17;MQRankSum=0.746;QD=2.15;ReadPosRankSum=-1.656;VQSLOD=1.0061;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:0.79:0,1,1	0/0:6,0:6:2.57:0,3,18	./.	./.	1/1:16,0:16:6.46:49,6,0	1/1:29,0:28:11.32:167,11,0	1/1:27,0:27:8.40:82,8,0	1/1:26,0:23:0.78:1,1,0	1/1:16,0:16:3.46:25,3,0	0/1:29,0:29:0:0,0,0	0/0:19,0:19:2.49:0,2,13	1/1:27,0:26:20.68:179,21,0	1/1:17,0:17:7.25:56,7,0	1/1:28,0:26:6.91:138,7,0	0/0:20,0:19:2.50:0,2,9	0/1:16,0:16:0:0,0,0	0/0:46,0:44:58.62:0,59,1017	0/0:29,0:27:46.03:0,46,756	0/1:16,0:15:30.75:42,0,31	0/0:17,0:17:5.53:0,6,31	0/1:22,0:21:0:0,0,0	1/1:17,0:15:11.98:113,12,0	1/1:8,7:17:2.97:24,3,0	1/1:39,0:37:0.47:1,0,0	1/1:14,0:13:8.99:75,9,0	0/1:24,0:24:14.82:15,0,35	0/1:15,0:15:29.43:29,0,36	0/0:13,0:13:6.02:0,6,72
chr10	94858908	.	GTGTGTGTGTGTGTGTGTGTA	G	1249.04	PASS	AB=0.951;AC=10;AF=0.179;AN=56;BaseQRankSum=5.120;DP=656;FS=6.764;HRun=0;HaplotypeScore=271.2677;InbreedingCoeff=0.1442;MQ=45.43;MQ0=18;MQRankSum=-1.545;QD=7.81;ReadPosRankSum=1.198;VQSLOD=1.5955;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:14.68:0,15,751	0/0:6,0:6:3.35:0,3,16	0/0:24,0:4:9.03:0,9,248	0/0:43,0:8:3.01:0,3,76	0/0:18,0:18:30:0,30,514	0/0:29,0:28:24.90:0,25,1126	0/0:26,0:26:24.01:0,24,833	0/1:26,0:23:18.87:19,0,41	0/0:16,0:16:15.05:0,15,287	0/1:17,12:29:8.50:372,0,8	1/1:8,12:20:6.02:202,6,0	0/0:27,0:26:30.75:0,31,975	0/0:18,0:18:30.10:0,30,957	0/0:27,0:25:12.98:0,13,765	0/0:19,0:18:2.98:0,3,22	0/0:16,0:16:0.12:0,0,0	0/0:44,0:42:87.24:0,87,5319	0/0:29,0:27:63.22:0,63,4046	0/1:14,0:13:40.37:40,0,60	0/1:16,0:16:17.92:170,0,18	0/0:23,0:22:2.99:0,3,25	0/0:17,0:15:15.99:0,16,672	0/0:18,0:18:8.76:0,9,235	0/0:38,0:36:12.14:0,12,394	0/0:14,0:13:27.55:0,28,497	0/1:24,0:24:99:179,0,180	0/1:18,0:18:83.32:83,0,99	1/1:7,6:13:6.02:324,6,0
chr10	94858916	.	GTGTGTGTGTGTA	G	1748.93	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=3.913;DP=636;FS=3.425;HRun=0;HaplotypeScore=205.8275;InbreedingCoeff=0.2802;MQ=46.96;MQ0=21;MQRankSum=0.141;QD=5.59;ReadPosRankSum=-0.480;VQSLOD=2.5595;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:29.01:0,29,490	1/1:1,4:5:2.62:107,3,0	0/0:21,0:6:5:0,5,151	0/0:34,0:5:1.38:0,1,24	1/1:17,0:17:2.90:217,3,0	0/0:28,0:27:24.85:0,25,526	0/0:26,0:27:29.68:0,30,520	1/1:29,0:27:7.80:145,8,0	1/1:12,1:13:9.95:71,10,0	1/1:25,0:25:33.32:254,33,0	1/1:18,0:18:3.01:87,3,0	0/1:26,0:25:24.04:24,0,403	0/1:19,0:19:16.22:16,0,438	0/0:26,0:24:12.51:0,13,434	1/1:19,0:18:3.01:49,3,0	0/0:15,0:15:0.06:0,0,1	0/0:42,0:40:80.15:0,80,3317	0/0:27,0:26:52.55:0,53,2541	0/1:14,0:12:24.71:103,0,25	0/1:17,0:17:30.97:228,0,31	1/1:22,0:21:0.40:1,0,0	0/0:17,0:16:21.94:0,22,372	0/1:19,0:19:5.98:6,0,106	0/0:38,0:36:14.59:0,15,246	1/1:16,0:14:20.06:157,20,0	0/1:24,0:24:46.18:178,0,46	0/1:20,0:20:81.62:107,0,82	1/1:10,0:10:6.02:173,6,0
chr10	94858918	.	GTGTGTGTGTA	G	1876.74	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=2.838;DP=638;FS=0.518;HRun=0;HaplotypeScore=190.9719;InbreedingCoeff=0.3050;MQ=47.97;MQ0=21;MQRankSum=-0.476;QD=6.11;ReadPosRankSum=-0.814;VQSLOD=2.5178;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:33.26:0,33,487	1/1:5,0:5:2.62:75,3,0	0/1:22,0:6:1.86:2,0,76	0/0:36,0:5:1.38:0,1,24	1/1:16,0:16:26.99:254,27,0	0/0:28,0:27:24.43:0,24,459	0/0:27,0:27:29.82:0,30,444	1/1:27,0:25:16.36:189,16,0	1/1:13,0:13:15:154,15,0	1/1:23,0:23:32.18:241,32,0	1/1:18,0:18:3:73,3,0	0/1:25,0:24:46.45:46,0,326	0/1:19,0:19:20.54:21,0,361	0/0:26,0:24:12.04:0,12,360	1/1:2,17:18:3.01:94,3,0	0/0:1,14:15:0.04:0,0,1	0/0:41,0:39:80.13:0,80,2803	0/0:28,0:27:55.63:0,56,2182	0/1:14,0:12:24.24:90,0,24	0/1:16,0:16:30.97:172,0,31	0/0:23,0:22:4.83:0,5,41	0/0:19,0:18:24.85:0,25,348	0/1:19,0:19:3.38:3,0,113	0/0:39,0:37:14.59:0,15,222	1/1:17,0:15:32.85:293,33,0	0/1:24,0:24:99:127,0,118	0/1:20,0:20:78.90:79,0,82	1/1:10,0:10:6.02:145,6,0
chr10	94858926	.	GTA	G	1441.11	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=2.255;DP=594;FS=0.000;HRun=0;HaplotypeScore=137.0973;InbreedingCoeff=0.3371;MQ=49.20;MQ0=18;MQRankSum=1.294;QD=4.85;ReadPosRankSum=-2.795;VQSLOD=2.1180;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:35.24:0,35,296	1/1:4,0:4:2.96:19,3,0	0/0:25,0:10:3.24:0,3,136	0/1:28,0:10:23.81:55,0,24	1/1:15,0:15:35.89:291,36,0	0/0:26,0:25:20.06:0,20,188	0/1:25,0:25:17.62:18,0,176	1/1:18,0:16:20.99:313,21,0	1/1:14,0:14:20.91:165,21,0	1/1:15,0:15:28.91:265,29,0	1/1:13,0:13:2.92:17,3,0	0/1:23,0:22:68.15:68,0,157	0/1:17,0:17:40.42:40,0,154	0/0:27,0:26:16.78:0,17,119	1/1:18,0:17:2.97:20,3,0	0/1:14,0:14:0.02:0,0,0	0/0:38,0:36:57.65:0,58,1005	0/0:28,0:28:23:0,23,821	0/1:12,0:10:32.36:32,0,53	0/1:20,0:20:8.28:8,0,123	0/0:23,4:26:13.42:0,13,100	0/1:22,0:21:1.16:1,0,237	0/1:18,0:18:0.39:0,0,134	0/0:37,0:36:16.59:0,17,140	1/1:15,0:14:32.96:275,33,0	0/0:26,0:26:4.51:0,5,157	0/0:23,0:23:24.30:0,24,163	1/1:6,0:6:5.85:33,6,0
chr10	94860148	.	AAC	A	420.62	PASS	AB=0.981;AC=36;AF=0.720;AN=50;BaseQRankSum=6.988;DP=507;FS=0.000;HRun=0;HaplotypeScore=105.8062;InbreedingCoeff=0.1205;MQ=64.29;MQ0=6;MQRankSum=-2.677;QD=1.12;ReadPosRankSum=-2.285;VQSLOD=1.3889;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:8.85:9,0,14	1/1:10,0:10:8.26:64,8,0	./.	./.	1/1:18,0:18:2.87:15,3,0	1/1:21,0:21:10.51:43,11,0	1/1:11,0:11:3.56:13,4,0	0/0:15,0:14:3.88:0,4,26	1/1:14,0:13:7.68:47,8,0	0/1:17,0:16:7.28:7,0,67	0/1:16,0:16:15.44:18,0,15	1/1:9,0:9:5.36:22,5,0	1/1:19,0:19:4.28:31,4,0	1/1:11,0:11:7.13:37,7,0	1/1:14,0:14:2.74:37,3,0	1/1:23,0:23:14.11:75,14,0	0/0:31,0:31:48.74:0,49,587	0/1:18,4:21:15.12:15,0,168	1/1:9,0:9:1.07:10,1,0	1/1:14,0:14:5.60:27,6,0	0/1:28,0:28:0:0,0,0	./.	1/1:11,0:11:7.81:33,8,0	0/1:27,0:27:2.39:2,0,38	0/0:17,0:17:0.47:0,0,1	0/1:15,0:15:14.50:14,0,17	1/1:16,0:16:5.60:27,6,0	0/1:15,0:15:0.46:8,0,0
chr10	94860174	.	CACACACACACACAG	C	4164.75	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=3.514;DP=602;FS=8.279;HRun=0;HaplotypeScore=219.4593;InbreedingCoeff=0.2573;MQ=51.82;MQ0=18;MQRankSum=-1.447;QD=9.80;ReadPosRankSum=-6.105;VQSLOD=-0.1267;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:36:6.01:85,6,0	0/1:13,0:13:4.73:364,0,5	1/1:14,0:3:2.94:18,3,0	0/0:20,0:9:11.60:0,12,144	1/1:18,0:17:8.95:120,9,0	0/1:18,0:18:41.86:42,0,595	0/1:16,0:16:99:161,0,152	0/1:17,0:16:99:168,0,117	1/1:22,0:21:41.86:609,42,0	1/1:23,2:23:51.29:621,51,0	1/1:7,14:21:5.59:241,6,0	0/0:12,0:12:8.91:0,9,219	0/0:21,0:21:9.40:0,9,291	0/1:16,0:16:9.83:10,0,403	1/1:15,0:15:22.65:221,23,0	1/1:26,0:26:15.05:485,15,0	0/0:31,0:31:43.14:0,43,2700	0/0:30,0:29:64.83:0,65,2693	1/1:26,0:24:9.32:309,9,0	1/1:23,1:23:8.96:164,9,0	0/1:34,0:34:6.50:110,0,6	0/0:29,0:28:0.94:0,1,3	0/0:19,0:18:5.17:0,5,593	0/1:39,0:38:99:122,0,1027	0/0:15,0:15:2.96:0,3,19	1/1:17,0:17:7.02:201,7,0	1/1:17,0:17:6.47:89,6,0	0/1:9,0:9:25.98:26,0,125
chr10	94860176	.	CACACACACACAG	C	4654.58	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=3.295;DP=614;FS=1.580;HRun=0;HaplotypeScore=208.2810;InbreedingCoeff=0.2430;MQ=51.93;MQ0=18;MQRankSum=-1.600;QD=10.39;ReadPosRankSum=-6.371;VQSLOD=2.0426;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,30:35:6.02:153,6,0	0/1:13,0:13:4.67:294,0,5	1/1:16,0:2:2.94:18,3,0	0/0:22,0:10:7.73:0,8,103	1/1:19,0:18:8.94:93,9,0	0/1:18,0:18:67.04:67,0,416	0/1:19,0:19:86.79:266,0,87	0/1:17,0:16:35.78:196,0,36	1/1:22,0:21:41.86:539,42,0	1/1:25,0:23:53.87:586,54,0	1/1:20,0:20:5.70:176,6,0	0/0:12,0:12:8.32:0,8,148	0/0:22,0:22:9.37:0,9,205	0/1:15,0:15:59.95:60,0,243	1/1:15,0:15:7.87:156,8,0	1/1:27,0:27:15.05:416,15,0	0/0:31,0:31:41.27:0,41,2352	0/0:30,0:29:64.78:0,65,2319	1/1:26,0:24:56.37:443,56,0	1/1:25,0:24:11.98:183,12,0	1/1:32,1:33:30.08:259,30,0	0/0:32,0:31:0.47:0,0,2	0/1:20,0:19:56.81:57,0,381	0/1:39,0:38:99:144,0,603	0/0:17,0:17:2.96:0,3,19	1/1:17,0:17:36.76:331,37,0	1/1:15,1:16:9.02:185,9,0	0/1:9,0:9:31.81:32,0,49
chr10	94860178	.	CACACACACAG	C	5043.58	PASS	AB=0.994;AC=36;AF=0.643;AN=56;BaseQRankSum=2.796;DP=623;FS=1.000;HRun=0;HaplotypeScore=197.6019;InbreedingCoeff=0.2470;MQ=52.04;MQ0=18;MQRankSum=-1.300;QD=10.80;ReadPosRankSum=-6.285;VQSLOD=1.8519;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,1:35:6.02:158,6,0	0/1:13,0:13:10.15:219,0,10	1/1:17,0:2:2.94:18,3,0	0/0:22,0:10:7.73:0,8,103	1/1:20,0:19:8.91:65,9,0	0/1:18,1:19:99:153,0,217	0/1:19,0:19:31.76:266,0,32	1/1:17,0:16:5.38:262,5,0	1/1:24,0:24:47.83:519,48,0	1/1:25,0:23:53.88:559,54,0	1/1:20,0:20:5.70:148,6,0	0/1:12,0:12:1.83:2,0,69	0/0:22,0:22:8.48:0,8,127	0/1:15,0:15:99:135,0,151	1/1:16,0:16:1.55:135,2,0	1/1:29,0:29:15.05:346,15,0	0/0:31,0:31:41.22:0,41,1996	0/0:32,0:31:70.26:0,70,1959	1/1:6,21:24:60.35:521,60,0	1/1:3,22:24:11.99:258,12,0	1/1:31,0:31:32.64:254,33,0	0/0:32,0:31:0.47:0,0,2	0/1:21,0:20:80.79:81,0,190	0/1:38,0:37:99:152,0,336	0/0:17,0:17:2.96:0,3,19	1/1:2,15:17:38.88:481,39,0	1/1:2,13:15:8.80:241,9,0	0/1:9,0:9:0.50:70,0,1
chr10	94860182	.	CACACAG	C	5208.01	PASS	AB=0.964;AC=41;AF=0.732;AN=56;BaseQRankSum=5.333;DP=633;FS=0.507;HRun=0;HaplotypeScore=173.9033;InbreedingCoeff=0.4507;MQ=52.24;MQ0=18;MQRankSum=0.003;QD=10.46;ReadPosRankSum=-1.618;VQSLOD=3.9358;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:34:6.02:84,6,0	0/1:12,0:13:21.41:107,0,21	0/1:20,0:4:9.02:9,0,35	0/0:26,0:13:19.73:0,20,210	0/1:19,0:19:0.07:12,0,0	1/1:17,3:20:33.92:338,34,0	1/1:19,0:19:44.91:336,45,0	1/1:19,0:18:42.35:344,42,0	1/1:25,0:24:40.37:379,40,0	1/1:26,0:24:56.87:527,57,0	1/1:20,0:20:5.81:93,6,0	1/1:13,0:13:10.62:54,11,0	0/1:23,0:23:11.83:12,0,16	1/1:17,0:17:7.03:224,7,0	0/1:14,0:15:40.23:101,0,40	1/1:31,0:31:15.05:206,15,0	0/0:30,0:30:39.93:0,40,1329	0/0:32,0:31:69.51:0,70,1240	1/1:26,0:23:52.99:464,53,0	1/1:24,0:23:11.97:138,12,0	1/1:29,0:29:35.56:257,36,0	0/0:30,0:29:0.47:0,0,1	1/1:21,2:22:22.41:351,22,0	1/1:40,0:39:65.77:513,66,0	0/0:17,0:17:2.96:0,3,19	1/1:17,0:17:38.87:351,39,0	1/1:14,0:14:8.78:121,9,0	1/1:7,1:8:20.73:189,21,0
chr10	94860184	.	CACAGACACACACACACACAT	C	3834.39	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=3.858;DP=636;FS=2.614;HRun=0;HaplotypeScore=289.0746;InbreedingCoeff=0.6548;MQ=55.25;MQ0=17;MQRankSum=-3.012;QD=20.29;ReadPosRankSum=-2.174;VQSLOD=1.7600;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:8.96:0,9,107	1/1:3,10:13:16.79:723,17,0	0/0:24,0:9:19.87:0,20,280	0/0:28,0:16:38.89:0,39,819	1/1:3,17:19:9.03:282,9,0	0/0:20,0:21:31.02:0,31,1245	0/0:18,0:19:26.68:0,27,754	0/0:18,0:17:22.86:0,23,449	1/1:18,5:22:25.81:1215,26,0	0/1:27,0:25:5.36:5,0,536	0/1:20,0:20:15.74:19,0,16	0/0:1,0:14:9.50:0,10,453	0/0:2,0:22:9.40:0,9,494	0/0:21,0:21:21.95:0,22,998	1/1:16,0:16:33.10:694,33,0	1/1:1,30:31:15.99:850,16,0	0/0:30,0:30:78.52:0,79,4360	0/0:30,0:29:73.10:0,73,4208	0/0:26,0:23:18.42:0,18,749	0/1:24,0:23:5.65:6,0,131	0/0:28,0:28:16.04:0,16,465	0/0:1,0:29:0.94:0,1,2	0/0:22,0:21:28.48:0,28,1278	0/0:36,0:38:57.26:0,57,2364	1/1:1,14:15:3.01:41,3,0	0/0:17,0:17:26.79:0,27,629	0/0:14,0:14:9.02:0,9,178	0/0:8,0:8:16.30:0,16,518
chr10	94861257	.	T	TG	3893.72	PASS	AB=0.634;AC=11;AF=0.196;AN=56;BaseQRankSum=3.208;DP=700;FS=16.433;HRun=8;HaplotypeScore=90.8781;InbreedingCoeff=0.8798;MQ=70.96;MQ0=0;MQRankSum=-0.818;QD=22.77;ReadPosRankSum=0.126;VQSLOD=2.3367;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,44:49:99:1419,123,0	0/0:16,0:16:36:0,36,324	0/0:11,0:11:23.86:0,24,191	0/0:13,0:13:16.31:0,16,192	0/0:19,0:20:53.04:0,53,468	0/0:30,0:30:84.04:0,84,769	0/0:30,0:30:81.01:0,81,736	0/0:33,0:33:71.98:0,72,650	0/0:34,0:34:96.05:0,96,878	0/0:14,0:14:42.02:0,42,384	0/0:24,0:24:63.03:0,63,576	0/0:31,0:31:81.02:0,81,741	0/0:27,0:27:63:0,63,570	0/0:18,0:18:45.02:0,45,411	0/0:24,0:24:60:0,60,544	0/0:33,0:33:87.03:0,87,796	0/0:31,0:31:87.02:0,87,791	0/0:24,0:24:66.04:0,66,604	1/1:4,12:16:36.11:415,36,0	1/1:1,16:17:39.12:450,39,0	0/1:19,26:45:43.63:557,0,44	0/0:30,0:30:78:0,78,702	0/0:18,0:18:45.02:0,45,412	0/0:30,0:30:69.02:0,69,631	0/0:24,0:23:66.04:0,66,604	1/1:6,20:26:32.71:630,33,0	1/1:4,14:18:14.58:422,15,0	0/0:14,0:14:36.01:0,36,329
chr10	94861376	.	G	GC	7951.78	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.175;DP=770;FS=7.401;HRun=0;HaplotypeScore=131.5645;InbreedingCoeff=0.9991;MQ=83.73;MQ0=0;MQRankSum=-17.510;QD=37.33;ReadPosRankSum=0.737;VQSLOD=3.7263;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:34:81.28:1291,81,0	0/0:12,0:12:36.10:0,36,485	0/0:25,0:25:72.22:0,72,969	0/0:29,0:29:77.03:0,77,927	0/0:29,0:29:84.27:0,84,1157	1/1:2,20:22:57.18:885,57,0	1/1:2,38:40:99:1578,99,0	0/0:37,0:37:99:0,111,1552	0/0:37,0:37:99:0,99,1364	0/0:29,0:29:87.29:0,87,1216	0/0:24,0:24:60.67:0,61,839	1/1:2,23:25:68.91:1094,69,0	1/1:1,25:26:66.23:1050,66,0	1/1:3,17:20:51.17:813,51,0	0/0:31,0:31:87.29:0,87,1216	0/0:45,0:45:99:0,129,1786	0/0:38,0:38:99:0,111,1534	0/0:27,0:27:78.26:0,78,1091	0/0:17,0:17:51.17:0,51,713	0/0:28,0:28:72.24:0,72,1006	0/0:68,0:68:99:0,202,2775	1/1:1,13:10:21.07:334,21,0	1/1:0,14:12:30.10:478,30,0	1/1:1,17:18:27.09:430,27,0	0/0:31,0:31:90.28:0,90,1240	0/0:18,0:18:54.18:0,54,755	0/0:21,0:21:57.18:0,57,779	0/0:11,0:11:33.11:0,33,461
chr10	94861383	.	AG	A	6442.50	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=18.079;DP=739;FS=2.844;HRun=1;HaplotypeScore=133.3721;InbreedingCoeff=0.9982;MQ=86.41;MQ0=0;MQRankSum=-17.694;QD=31.58;ReadPosRankSum=0.355;VQSLOD=4.5665;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:34:75.21:1029,75,0	0/0:14,0:14:39.11:0,39,592	0/0:28,0:28:81.20:0,81,1222	0/0:30,0:30:84.27:0,84,1269	0/0:26,0:26:75.24:0,75,1175	1/1:1,21:22:51.17:711,51,0	1/1:1,39:40:99:1403,102,0	0/0:33,0:33:99:0,99,1560	0/0:35,0:35:93.29:0,93,1431	0/0:27,0:27:81.28:0,81,1295	0/0:24,0:24:60.66:0,61,935	1/1:0,22:22:62.89:878,63,0	1/1:0,23:23:60.20:836,60,0	1/1:0,19:19:45.15:628,45,0	0/0:31,0:31:84.27:0,84,1312	0/0:40,0:40:99:0,114,1815	0/0:38,0:38:99:0,111,1773	0/0:26,0:26:78.24:0,78,1210	0/0:20,0:20:60.17:0,60,911	0/0:24,0:24:66.21:0,66,1030	0/0:64,0:64:99:0,189,2989	1/1:0,16:12:24.08:335,24,0	1/1:1,12:11:27.09:373,27,0	1/1:0,15:15:18.06:251,18,0	0/0:28,0:28:81.26:0,81,1272	0/0:17,0:17:51.17:0,51,815	0/0:18,0:18:48.16:0,48,767	0/0:12,0:12:36.12:0,36,575
chr10	94861438	.	T	TC	13994.72	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-5.881;DP=584;FS=8.539;HRun=3;HaplotypeScore=79.5259;InbreedingCoeff=0.9973;MQ=79.67;MQ0=0;MQRankSum=-2.027;QD=35.98;ReadPosRankSum=-0.658;VQSLOD=4.7743;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:75.16:1016,75,0	1/1:1,10:11:33.11:461,33,0	0/0:19,0:19:48.10:0,48,551	0/0:17,0:17:45.06:0,45,509	1/1:0,7:7:21.07:293,21,0	1/1:3,18:21:56.98:713,57,0	1/1:4,30:34:84.28:1159,84,0	1/1:2,21:23:62.96:824,63,0	1/1:4,36:39:93.31:1302,93,0	1/1:0,10:10:30.09:403,30,0	1/1:1,7:8:18.06:246,18,0	1/1:2,28:30:87.15:1146,87,0	1/1:3,24:27:75.18:1009,75,0	1/1:2,18:20:54.18:755,54,0	1/1:3,23:26:78.25:1067,78,0	1/1:3,26:28:84.26:1144,84,0	0/0:32,0:32:96.26:0,96,1127	0/0:27,0:27:69.18:0,69,814	0/0:11,0:11:30.09:0,30,360	0/0:12,0:12:30.09:0,30,360	0/0:49,0:49:99:0,141,1669	1/1:1,16:17:38.98:496,39,0	1/1:0,11:11:30.10:397,30,0	1/1:1,14:15:33.02:432,33,0	1/1:1,17:18:51.17:714,51,0	0/0:9,0:9:24.07:0,24,288	0/0:19,0:19:57.15:0,57,661	1/1:0,10:10:30.10:419,30,0
chr10	94861521	.	T	TA	9565.09	PASS	AB=0.933;AC=21;AF=0.375;AN=56;BaseQRankSum=-15.033;DP=702;FS=3.959;HRun=1;HaplotypeScore=81.8332;InbreedingCoeff=0.9309;MQ=75.73;MQ0=0;MQRankSum=3.154;QD=36.23;ReadPosRankSum=2.433;VQSLOD=5.3726;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,120,1553	1/1:1,10:11:27.09:405,27,0	0/0:22,0:22:57.16:0,57,715	0/0:19,0:19:51.13:0,51,620	1/1:5,15:20:57.19:852,57,0	0/0:16,0:16:45.13:0,45,568	0/0:37,0:37:99:0,102,1320	1/1:2,25:27:75.24:1104,75,0	1/1:7,30:36:90.30:1349,90,0	1/1:1,23:25:75.25:1115,75,0	1/1:1,15:16:48.16:719,48,0	0/0:23,0:23:60.01:0,60,764	0/0:24,0:24:66.21:0,66,855	0/0:30,0:30:81.25:0,81,1034	1/1:2,43:45:99:1870,126,0	1/1:3,28:30:45.39:1156,45,0	0/0:17,0:17:51.17:0,51,662	0/0:29,0:29:87.21:0,87,1087	0/0:21,0:21:54.18:0,54,701	0/0:26,0:26:72.23:0,72,934	0/0:34,0:34:96.29:0,96,1215	0/0:28,0:28:84.26:0,84,1066	0/0:21,0:21:63.20:0,63,818	0/0:30,0:30:69.09:0,69,896	1/1:0,19:19:57.19:855,57,0	0/1:26,2:28:5.71:6,0,902	0/0:16,0:16:42.14:0,42,545	1/1:0,5:5:9.03:135,9,0
chr10	94861595	.	G	GCACACACA	1908.09	PASS	AB=1.000;AC=30;AF=0.577;AN=52;BaseQRankSum=0.316;DP=599;FS=1.609;HRun=0;HaplotypeScore=171.9292;InbreedingCoeff=0.4646;MQ=57.53;MQ0=17;MQRankSum=-2.461;QD=5.91;ReadPosRankSum=-2.677;VQSLOD=2.4712;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:9.37:0,9,66	0/0:15,0:14:14.94:0,15,142	./.	./.	0/1:23,0:23:43.35:45,0,43	1/1:16,0:17:5.75:110,6,0	1/1:28,0:27:9.40:61,9,0	1/1:19,0:19:0.47:1,0,0	0/0:25,0:25:17.50:0,17,297	1/1:16,0:17:19.72:449,20,0	1/1:18,0:18:3.01:95,3,0	1/1:14,0:14:3.01:94,3,0	1/1:13,0:14:6.47:75,6,0	1/1:9,0:10:3.01:94,3,0	0/1:31,0:30:18.25:18,0,153	0/1:16,0:16:25.84:26,0,116	0/0:21,0:22:9.15:0,9,567	0/0:18,0:21:10.30:0,10,565	1/1:7,0:6:6.49:128,6,0	0/0:9,4:13:0.89:0,1,2	1/1:24,0:22:6.02:158,6,0	0/0:26,0:26:0.76:0,1,2	1/1:21,0:21:7.34:75,7,0	0/1:21,0:20:0:1,0,0	0/0:14,0:13:17.84:0,18,187	1/1:24,0:24:18.03:298,18,0	1/1:13,4:19:11.06:347,11,0	0/0:12,0:15:14.64:0,15,251
chr10	94861628	.	C	CACG	5505.09	PASS	AB=0.605;AC=25;AF=0.446;AN=56;BaseQRankSum=0.645;DP=669;FS=14.704;HRun=0;HaplotypeScore=123.5302;InbreedingCoeff=0.2930;MQ=57.49;MQ0=15;MQRankSum=3.017;QD=13.23;ReadPosRankSum=3.582;VQSLOD=3.8817;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:27:99:119,0,195	1/1:3,7:11:17.72:305,18,0	0/0:23,0:6:14.40:0,14,159	0/0:44,0:12:24.19:0,24,273	1/1:15,5:30:70.45:1193,70,0	0/1:4,0:29:32.42:53,0,32	0/1:13,0:35:86.14:86,0,134	0/0:14,0:14:30.04:0,30,375	1/1:4,21:28:38.79:788,39,0	0/1:13,0:33:99:891,0,176	0/1:7,0:27:99:186,0,165	0/1:5,0:20:52.99:53,0,71	0/1:5,0:10:86.92:122,0,87	1/1:3,0:22:3.01:45,3,0	1/1:4,22:29:33.01:625,33,0	1/1:4,1:17:29.76:471,30,0	0/0:25,0:25:67.43:0,67,958	0/0:24,0:23:64.75:0,65,882	0/0:13,0:13:36.93:0,37,409	0/0:21,0:20:27.09:0,27,373	0/0:27,0:25:23.87:0,24,297	0/1:5,0:25:20.28:110,0,20	0/1:8,0:24:71.76:94,0,72	1/1:4,0:22:2.98:21,3,0	1/1:2,16:19:20.64:342,21,0	0/0:24,0:24:61.70:0,62,781	0/0:20,0:20:34.85:0,35,528	0/0:18,0:18:49.39:0,49,629
chr10	94861630	.	C	CG	705.06	PASS	AB=0.958;AC=12;AF=0.214;AN=56;BaseQRankSum=6.076;DP=664;FS=9.144;HRun=0;HaplotypeScore=128.8772;InbreedingCoeff=-0.0024;MQ=57.64;MQ0=15;MQRankSum=3.345;QD=3.12;ReadPosRankSum=1.792;VQSLOD=2.7449;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:27:17.23:0,17,197	0/1:11,0:10:3.31:70,0,3	0/0:23,0:7:1.80:0,2,138	0/0:42,0:12:25.78:0,26,322	0/1:23,1:26:34.61:217,0,35	0/0:29,0:29:1.11:0,1,41	0/0:34,0:34:10.07:0,10,169	0/0:17,0:17:42.08:0,42,476	0/1:26,1:27:51.76:159,0,52	0/0:33,0:33:30.29:0,30,298	0/1:26,0:26:16.25:16,0,181	0/0:18,0:18:7.48:0,7,87	0/0:11,0:11:10.66:0,11,100	0/0:24,0:24:10.55:0,11,93	1/1:27,0:26:1.24:128,1,0	0/1:14,4:17:40.73:127,0,41	0/0:26,0:26:57.93:0,58,883	0/0:24,0:24:70.57:0,71,885	0/0:15,0:15:39.11:0,39,494	0/0:20,0:19:26.97:0,27,372	0/0:26,0:24:33.06:0,33,409	0/1:26,0:26:21.49:21,0,26	0/1:21,1:23:43.54:44,0,110	1/1:22,0:23:1.14:5,1,0	0/1:19,0:18:43.16:56,0,43	0/0:25,0:25:63.21:0,63,861	0/0:20,0:20:42.96:0,43,558	0/0:18,0:18:49.19:0,49,565
chr10	94861732	.	C	CTGTGTGTG	3543.62	PASS	AB=0.876;AC=33;AF=0.611;AN=54;BaseQRankSum=-1.826;DP=665;FS=9.052;HRun=0;HaplotypeScore=215.6299;InbreedingCoeff=0.6714;MQ=64.88;MQ0=13;MQRankSum=-2.093;QD=8.48;ReadPosRankSum=-1.478;VQSLOD=1.0475;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:19:41.57:42,0,121	0/0:12,0:12:16.96:0,17,190	0/0:24,0:15:3.01:0,3,30	./.	0/0:20,0:21:24.05:0,24,419	1/1:18,0:17:6.42:126,6,0	1/1:21,11:31:2.39:121,2,0	1/1:22,0:20:8.74:53,9,0	0/0:19,0:19:14.63:0,15,266	0/1:29,0:29:52.16:179,0,52	1/1:16,0:21:32.57:283,33,0	1/1:16,0:16:8.38:62,8,0	1/1:22,0:21:18.68:160,19,0	1/1:17,0:17:17.94:182,18,0	0/0:27,0:29:40.40:0,40,822	0/0:19,0:19:25.77:0,26,515	0/0:11,0:22:23.88:0,24,198	0/0:16,0:31:29.80:0,30,213	1/1:11,0:11:9.84:66,10,0	1/1:22,1:25:18.03:471,18,0	0/1:17,0:35:6.88:85,0,7	1/1:31,0:31:24.88:314,25,0	1/1:22,0:23:29.74:318,30,0	1/1:31,0:30:17.94:158,18,0	0/0:27,0:29:42.92:0,43,806	1/1:11,0:20:33.49:423,33,0	1/1:25,0:26:22.44:279,22,0	1/1:9,0:17:12.04:223,12,0
chr10	94863101	.	GAAA	G	2110.31	PASS	AB=0.784;AC=12;AF=0.214;AN=56;BaseQRankSum=-5.014;DP=543;FS=2.925;HRun=14;HaplotypeScore=111.5159;InbreedingCoeff=0.7555;MQ=50.80;MQ0=26;MQRankSum=4.139;QD=15.40;ReadPosRankSum=1.100;VQSLOD=2.7288;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:26:67.93:0,68,732	0/1:1,0:8:3.89:4,0,35	1/1:16,0:3:2.22:10,2,0	0/0:19,0:7:14:0,14,97	0/0:8,0:30:44.14:0,44,548	0/0:24,0:21:47.98:0,48,544	0/0:19,0:19:45.07:0,45,555	0/0:28,0:27:60.03:0,60,838	0/0:5,0:14:20.96:0,21,221	0/0:14,0:17:31.98:0,32,413	0/0:18,0:20:41.61:0,42,527	0/0:12,0:11:21.54:0,22,280	0/0:14,0:11:15.51:0,16,210	0/0:11,0:12:20.91:0,21,229	0/0:5,0:23:20.39:0,20,238	0/0:1,0:7:9.03:0,9,128	0/0:27,0:28:62.68:0,63,1049	0/0:25,0:23:54.12:0,54,905	1/1:9,13:20:32.58:480,33,0	1/1:8,22:29:52.57:601,53,0	1/1:1,8:10:19.60:241,20,0	0/0:16,0:16:33.50:0,33,404	0/0:25,0:25:45.29:0,45,577	0/0:11,0:11:22.62:0,23,287	0/0:7,0:16:23.85:0,24,228	0/1:5,19:23:11.95:565,0,12	1/1:6,20:24:32.86:379,33,0	0/0:12,0:12:30.05:0,30,437
chr10	94863110	.	A	AAAAAG	5621.66	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-0.565;DP=558;FS=12.546;HRun=0;HaplotypeScore=134.6664;InbreedingCoeff=0.8381;MQ=59.77;MQ0=24;MQRankSum=-8.918;QD=33.66;ReadPosRankSum=2.577;VQSLOD=4.1345;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:25:99:130,0,104	1/1:7,0:7:2.75:13,3,0	0/0:24,0:10:19.34:0,19,149	0/0:24,0:10:18.72:0,19,125	0/0:29,0:29:17.44:0,17,133	1/1:13,7:20:51.09:1044,51,0	1/1:12,8:20:45.40:914,45,0	0/0:34,0:33:78.90:0,79,898	0/0:15,0:15:18.53:0,19,122	0/0:20,0:20:37.52:0,38,447	0/0:20,0:20:20.26:0,20,385	1/1:6,6:11:24.06:557,24,0	1/1:12,0:10:19.49:220,19,0	1/1:7,1:10:20.38:276,20,0	0/0:22,0:21:2.13:0,2,42	0/0:7,0:7:6.04:0,6,31	0/0:27,0:26:60.13:0,60,922	0/0:29,0:27:50.18:0,50,869	0/0:18,0:17:30.83:0,31,395	0/0:27,0:26:59.29:0,59,566	0/0:13,0:13:29.81:0,30,334	1/1:7,9:16:44.83:890,45,0	1/1:20,6:27:65.67:985,66,0	1/1:4,7:11:23.59:594,24,0	0/0:19,0:18:14.61:0,15,94	0/0:27,0:25:64.11:0,64,590	0/0:22,0:19:32.89:0,33,390	0/0:14,0:13:33:0,33,428
chr10	94863164	.	GAGCAAAC	G	12604.64	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=12.282;DP=501;FS=18.034;HRun=0;HaplotypeScore=138.8064;InbreedingCoeff=0.9678;MQ=71.50;MQ0=0;MQRankSum=-16.133;QD=63.02;ReadPosRankSum=-2.056;VQSLOD=3.6083;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:30:66.23:1685,66,0	0/0:5,0:5:15.05:0,15,594	0/0:9,0:10:12.04:0,12,271	0/0:12,0:12:4.01:0,4,631	0/0:24,0:24:69.19:0,69,2656	1/1:2,14:16:39.13:993,39,0	1/1:3,20:23:51.18:1321,51,0	1/1:1,15:15:42.12:961,42,0	0/0:19,0:19:57.20:0,57,2279	1/1:2,12:14:39.13:1012,39,0	1/1:1,15:17:48.16:1239,48,0	1/1:3,9:13:30.10:756,30,0	1/1:0,6:6:18.06:467,18,0	1/1:0,9:9:24.08:622,24,0	0/0:24,0:23:63.22:0,63,2519	0/0:10,0:10:27.09:0,27,1079	0/0:24,0:23:72.22:0,72,2690	0/0:31,0:31:87.30:0,87,3437	0/0:23,0:23:69.23:0,69,2469	0/0:28,0:28:84.29:0,84,3344	0/0:15,0:15:45.15:0,45,1653	1/1:3,16:19:45.15:1167,45,0	1/1:0,20:20:60.21:1544,60,0	1/1:0,8:8:18.06:449,18,0	0/0:21,0:21:45.14:0,45,1705	0/0:32,1:33:21.47:0,21,3658	0/0:22,0:22:57.20:0,57,2266	1/1:1,8:9:15.05:389,15,0
chr10	94864182	.	AAAG	A	1275.92	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.926;DP=660;FS=0.740;HRun=0;HaplotypeScore=93.6737;InbreedingCoeff=0.9996;MQ=68.34;MQ0=1;MQRankSum=-0.523;QD=34.48;ReadPosRankSum=2.481;VQSLOD=4.2775;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:37:81.28:1371,81,0	0/0:15,0:15:45.15:0,45,1003	0/0:22,0:16:42.13:0,42,856	0/0:26,0:20:47.20:0,47,827	0/0:32,0:32:96.33:0,96,2041	0/0:14,0:14:39.13:0,39,863	0/0:18,0:18:54.17:0,54,1167	0/0:30,0:30:90.27:0,90,1822	0/0:19,0:19:57.18:0,57,1196	0/0:26,0:26:78.27:0,78,1707	0/0:21,0:21:60.21:0,60,1286	0/0:23,0:23:66.21:0,66,1350	0/0:21,0:21:63.22:0,63,1344	0/0:22,0:22:66.23:0,66,1476	0/0:19,0:19:54.18:0,54,1092	0/0:18,0:18:51.17:0,51,1053	0/0:40,0:40:99:0,114,2464	0/0:29,0:29:87.30:0,87,1930	0/0:16,0:16:45.11:0,45,869	0/0:22,0:22:63.21:0,63,1336	0/0:19,0:19:48.12:0,48,900	0/0:24,0:24:72.23:0,72,1502	0/0:29,0:29:87.30:0,87,1902	0/0:25,0:25:63.16:0,63,1363	0/0:22,0:22:66.23:0,66,1422	0/0:27,0:27:81.27:0,81,1746	0/0:33,0:33:93.31:0,93,2018	0/0:11,0:11:33.10:0,33,693
chr10	94865138	.	CAG	C	17997.56	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=14.470;DP=723;FS=1.639;HRun=0;HaplotypeScore=101.7605;InbreedingCoeff=0.9854;MQ=94.26;MQ0=1;MQRankSum=-4.360;QD=41.47;ReadPosRankSum=4.831;VQSLOD=6.3372;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:41:99:1759,108,0	0/0:12,0:12:36.12:0,36,726	0/0:38,0:39:90.16:0,90,1978	0/0:26,0:26:69.11:0,69,1264	0/0:13,0:13:39.08:0,39,735	1/1:0,23:23:60.20:976,60,0	1/1:0,36:36:84.29:1368,84,0	1/1:0,30:30:87.22:1273,87,0	0/0:33,0:33:96.31:0,96,1908	0/0:26,0:26:78.05:0,78,1491	0/0:15,0:15:42.14:0,42,845	1/1:0,25:25:72.25:1172,72,0	1/1:0,25:25:72.19:1172,72,0	1/1:0,25:25:63.22:1026,63,0	0/0:29,0:29:87.30:0,87,1765	0/0:20,0:20:60.17:0,60,1145	0/0:28,0:28:75.21:0,75,1446	0/0:31,0:31:93.25:0,93,1718	1/1:0,17:17:48.11:700,48,0	1/1:0,21:21:45.11:691,45,0	1/1:0,56:56:99:2246,138,0	1/1:0,25:25:63.22:1022,63,0	1/1:0,16:16:39.13:634,39,0	1/1:0,37:37:96.33:1563,96,0	0/0:17,0:17:48.15:0,48,926	1/1:0,25:25:66.19:1027,66,0	1/1:0,30:29:78.24:1270,78,0	1/1:0,2:2:6.02:97,6,0
chr10	94865451	.	CA	C	2755.97	PASS	AB=0.801;AC=32;AF=0.571;AN=56;BaseQRankSum=-2.177;DP=579;FS=7.660;HRun=15;HaplotypeScore=84.5197;InbreedingCoeff=0.4657;MQ=79.91;MQ0=0;MQRankSum=2.880;QD=6.61;ReadPosRankSum=7.228;VQSLOD=2.3735;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,22:41:3.60:357,4,0	0/0:5,0:9:16.56:0,17,120	0/0:27,0:17:8.50:0,9,48	0/1:22,0:21:22.56:23,0,52	0/0:4,0:11:17.93:0,18,102	1/1:9,8:23:13.57:144,14,0	1/1:9,18:28:34.34:317,34,0	0/1:15,10:26:36:157,0,36	0/0:6,0:16:8.74:0,9,57	0/0:18,0:18:22.80:0,23,117	0/0:15,0:15:23.18:0,23,103	1/1:13,15:30:36.33:222,36,0	1/1:10,4:14:14.41:95,14,0	1/1:9,6:15:0.49:78,0,0	0/0:8,1:24:4.20:0,4,106	0/0:4,0:19:17.19:0,17,89	0/1:23,3:27:6.99:7,0,288	0/1:10,1:12:7.65:8,0,85	0/1:13,11:27:12.77:213,0,13	1/1:5,13:19:28:178,28,0	1/1:11,12:26:3.49:138,3,0	1/1:7,13:22:30.52:184,31,0	1/1:1,4:7:13.84:83,14,0	1/1:3,17:28:58.56:329,59,0	0/0:11,0:23:30.86:0,31,205	1/1:10,16:27:28.85:305,29,0	0/1:10,4:16:9.72:37,0,10	1/1:2,3:5:11.82:77,12,0
chr10	94865593	.	G	GTCT	2084.56	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.296;DP=614;FS=1.350;HRun=0;HaplotypeScore=106.2466;InbreedingCoeff=0.9918;MQ=74.63;MQ0=0;MQRankSum=-4.154;QD=52.11;ReadPosRankSum=0.402;VQSLOD=5.4280;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,2092	0/0:14,0:14:42.14:0,42,686	0/0:20,0:18:34.96:0,35,535	0/0:12,0:12:15.58:0,16,200	0/0:34,0:34:99:0,102,1637	0/0:27,0:27:81.26:0,81,1293	0/0:22,0:22:48.13:0,48,735	0/0:33,0:33:81.24:0,81,1230	0/0:15,0:15:45.12:0,45,681	1/1:6,11:17:48.16:965,48,0	1/1:1,19:23:60.12:1241,60,0	0/0:28,0:28:75.13:0,75,1113	0/0:10,0:10:30.08:0,30,460	0/0:10,0:10:27.08:0,27,414	0/0:16,0:16:39.06:0,39,533	0/0:12,0:12:36.12:0,36,588	0/0:29,0:29:81.19:0,81,1238	0/0:19,0:19:54.15:0,54,854	0/0:19,0:19:57.19:0,57,909	0/0:24,0:24:60.16:0,60,940	0/0:31,0:31:81.25:0,81,1268	0/0:23,0:23:57.15:0,57,857	0/0:14,0:14:39.13:0,39,636	0/0:17,0:17:45.15:0,45,730	0/0:26,0:26:75.26:0,75,1219	0/0:25,0:25:66.21:0,66,1052	0/0:25,0:25:69.20:0,69,1076	0/0:22,0:22:54.18:0,54,881
chr10	94865613	.	G	GT	1440.87	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-8.328;DP=611;FS=5.144;HRun=9;HaplotypeScore=99.8473;InbreedingCoeff=0.7489;MQ=66.09;MQ0=0;MQRankSum=1.098;QD=19.74;ReadPosRankSum=-2.891;VQSLOD=2.5191;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,114,972	0/0:13,0:13:32.92:0,33,275	0/1:12,0:9:7.50:8,0,40	0/0:8,0:8:2.73:0,3,14	0/0:35,0:35:98.98:0,99,859	0/0:25,0:25:68.98:0,69,599	0/0:22,0:22:50.97:0,51,439	1/1:6,32:38:96.17:1014,96,0	0/0:20,0:20:53.99:0,54,469	0/0:13,0:13:35.98:0,36,313	0/0:27,0:27:48.13:0,48,482	0/0:26,0:27:74:0,74,627	0/0:12,0:12:29.99:0,30,259	0/0:13,0:13:29.98:0,30,260	0/0:13,0:13:35.98:0,36,312	0/0:13,0:13:32.99:0,33,287	0/0:26,0:26:71.93:0,72,616	0/0:21,0:21:59.99:0,60,521	0/0:23,0:23:56.97:0,57,495	0/0:28,0:28:77.94:0,78,668	0/0:27,0:27:65.98:0,66,573	0/0:18,0:18:47.99:0,48,417	0/0:17,0:17:44.97:0,45,388	0/0:20,0:20:50.46:0,50,424	0/0:29,0:29:77.97:0,78,675	0/0:21,0:21:59.98:0,60,520	0/0:23,0:23:59.94:0,60,512	1/1:3,19:23:50.97:545,51,0
chr10	94865631	.	C	CATTT	1429.63	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.176;DP=632;FS=10.422;HRun=0;HaplotypeScore=152.2330;InbreedingCoeff=0.9193;MQ=61.58;MQ0=2;MQRankSum=-8.487;QD=31.77;ReadPosRankSum=-4.955;VQSLOD=1.8975;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:87.30:0,87,1487	0/0:12,0:12:28.34:0,28,466	0/0:14,0:7:9.03:0,9,153	0/0:4,0:4:5.91:0,6,68	0/0:39,0:39:99:0,99,1669	0/0:26,0:26:48.16:0,48,824	0/0:22,0:22:57.19:0,57,970	0/0:34,0:34:69.23:0,69,1158	0/0:20,0:20:45.15:0,45,773	1/1:12,12:24:51.12:1220,51,0	1/1:12,9:20:34.05:331,34,0	0/0:29,0:29:69.24:0,69,1185	0/0:11,0:11:24.08:0,24,411	0/0:17,0:17:42.14:0,42,720	0/0:16,0:16:33.11:0,33,566	0/0:17,0:17:48.16:0,48,824	0/0:26,0:26:60.21:0,60,1030	0/0:19,0:19:54.18:0,54,927	0/0:27,0:27:63.17:0,63,978	0/0:32,0:32:81.25:0,81,1335	0/0:28,0:28:61.38:0,61,1038	0/0:22,0:22:51.17:0,51,869	0/0:18,0:18:36.12:0,36,613	0/0:21,0:21:53.84:0,54,927	0/0:30,0:30:72.25:0,72,1226	0/0:24,0:24:63.22:0,63,1073	0/0:20,0:20:54.18:0,54,927	0/0:21,0:21:45.15:0,45,775
chr10	94865703	.	ACG	A	339.86	PASS	AB=0.877;AC=5;AF=0.089;AN=56;BaseQRankSum=2.772;DP=693;FS=6.345;HRun=0;HaplotypeScore=224.3377;InbreedingCoeff=0.4843;MQ=53.77;MQ0=9;MQRankSum=-4.226;QD=4.66;ReadPosRankSum=-2.671;VQSLOD=1.7848;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:26.11:0,26,487	0/0:9,0:9:17.23:0,17,145	0/0:24,0:7:14.93:0,15,176	0/0:25,0:7:13.21:0,13,164	0/0:26,0:26:30.58:0,31,450	0/0:22,0:22:34.15:0,34,219	0/0:39,0:38:45.29:0,45,719	0/0:29,0:29:55.53:0,56,776	0/0:24,0:24:30.18:0,30,308	1/1:19,5:24:52.44:424,52,0	0/1:10,7:17:0.14:0,0,0	0/0:26,0:26:32.17:0,32,274	0/0:19,0:19:22.79:0,23,167	0/0:24,0:24:38.69:0,39,467	0/0:21,0:21:33.98:0,34,200	0/0:25,0:25:37.65:0,38,394	0/0:27,0:27:81.24:0,81,1377	0/0:24,0:24:65.82:0,66,1092	0/0:16,0:15:27.61:0,28,481	0/0:33,0:32:64.54:0,65,662	0/0:46,0:46:79.91:0,80,720	0/0:26,0:26:36.34:0,36,414	0/0:24,0:24:31.65:0,32,320	0/0:26,0:26:35.33:0,35,402	0/0:23,0:23:28.17:0,28,254	0/1:20,0:20:17.74:18,0,362	0/0:23,0:23:46.12:0,46,308	0/1:11,1:12:9.57:10,0,181
chr10	94865709	.	GCACA	G	10194.37	PASS	AB=0.600;AC=43;AF=0.768;AN=56;BaseQRankSum=3.622;DP=684;FS=0.000;HRun=0;HaplotypeScore=200.3773;InbreedingCoeff=0.8278;MQ=53.46;MQ0=10;MQRankSum=-0.674;QD=18.74;ReadPosRankSum=0.246;VQSLOD=4.5148;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,24:35:28.80:438,29,0	1/1:7,2:11:21:262,21,0	0/0:23,0:7:8.88:0,9,99	0/0:26,0:7:5.16:0,5,128	1/1:6,17:23:8.59:151,9,0	1/1:3,17:22:42.61:677,43,0	0/1:12,22:36:3.67:92,0,4	1/1:16,14:30:42.81:414,43,0	1/1:5,15:22:39:625,39,0	0/0:25,0:25:22.33:0,22,370	0/0:18,0:18:5.39:0,5,50	1/1:6,19:27:36.04:524,36,0	1/1:2,14:17:27.08:426,27,0	1/1:7,13:20:24.08:399,24,0	1/1:3,16:20:36.12:580,36,0	1/1:6,20:26:36.10:597,36,0	0/0:22,0:28:65.14:0,65,1312	0/0:18,0:20:53.60:0,54,1113	1/1:7,8:14:5.75:237,6,0	1/1:10,18:29:35.80:561,36,0	1/1:14,35:50:66.22:1102,66,0	1/1:7,21:28:21.07:348,21,0	1/1:4,18:24:17.81:248,18,0	1/1:9,17:27:21.07:351,21,0	1/1:4,17:23:18.06:298,18,0	1/1:4,15:20:48.10:672,48,0	1/1:3,20:24:48.16:779,48,0	1/1:10,4:14:33:415,33,0
chr10	94866305	.	TTGTGTGTGCATG	T	7883.81	PASS	AB=0.841;AC=16;AF=0.286;AN=56;BaseQRankSum=13.690;DP=928;FS=10.563;HRun=0;HaplotypeScore=349.1628;InbreedingCoeff=0.7973;MQ=62.26;MQ0=7;MQRankSum=-13.474;QD=31.54;ReadPosRankSum=1.444;VQSLOD=2.8796;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:84.74:0,85,4075	1/1:6,7:13:24.08:817,24,0	0/0:51,0:37:66.18:0,66,2337	0/0:44,0:33:52.31:0,52,2157	1/1:11,14:25:11.88:423,12,0	0/0:22,0:22:60.21:0,60,3033	0/0:29,0:29:72.23:0,72,3430	0/0:42,0:42:60.21:0,60,2583	1/1:13,12:25:33.11:1135,33,0	0/1:31,21:51:99:2140,0,210	1/1:15,6:20:8.15:317,8,0	0/0:50,0:50:99:0,117,6272	0/0:25,0:25:54.19:0,54,2916	0/0:34,0:34:81.28:0,81,4202	1/1:16,10:26:27.09:933,27,0	1/1:14,10:24:24.08:819,24,0	0/0:27,0:27:72.24:0,72,3764	0/0:27,0:27:63.22:0,63,3380	0/0:21,0:20:45.15:0,45,2206	0/0:30,0:30:69.24:0,69,3809	0/0:87,0:87:99:0,208,11343	0/0:33,0:33:78.27:0,78,4255	0/0:25,0:25:60.21:0,60,3414	0/0:49,0:49:99:0,111,5530	1/1:14,18:32:39.13:1278,39,0	0/1:31,1:32:21.17:21,0,4354	0/0:33,0:33:75.24:0,75,3703	0/0:3,0:3:9.03:0,9,534
chr10	94866313	.	GCA	G	958.59	PASS	AB=0.932;AC=9;AF=0.161;AN=56;BaseQRankSum=15.381;DP=928;FS=9.203;HRun=0;HaplotypeScore=195.1923;InbreedingCoeff=0.0690;MQ=58.65;MQ0=9;MQRankSum=-13.187;QD=4.56;ReadPosRankSum=2.300;VQSLOD=2.2035;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,117,2230	0/1:12,0:12:40.91:41,0,86	0/0:58,0:42:99:0,123,2295	0/0:49,0:35:87.02:0,87,1773	0/1:20,0:20:25.83:26,0,76	0/0:23,0:23:66.23:0,66,1316	0/0:31,1:32:93.32:0,93,1807	0/0:44,0:43:99:0,129,2420	0/1:26,1:27:80.27:102,0,80	0/1:45,7:51:99:562,0,666	0/1:12,11:22:14.17:14,0,133	0/0:48,0:48:99:0,132,2623	0/0:24,0:24:66.23:0,66,1303	0/0:32,0:32:96.31:0,96,1867	0/1:27,0:27:68.93:80,0,69	1/1:22,1:23:24.25:113,24,0	0/0:28,1:29:59.94:0,60,1563	0/0:30,0:30:87.25:0,87,1628	0/0:23,0:21:63.22:0,63,1222	0/0:27,0:27:78.25:0,78,1514	0/0:88,0:88:99:0,259,5009	0/0:33,0:33:99:0,99,1915	0/0:23,0:23:69.24:0,69,1365	0/0:46,0:46:99:0,129,2531	0/1:26,0:26:99:167,0,129	0/0:31,1:32:49.17:0,49,1740	0/0:29,0:29:84.27:0,84,1639	0/0:3,0:3:9.03:0,9,183
chr10	94866459	.	CGT	C	607.02	PASS	AB=0.950;AC=31;AF=0.596;AN=52;BaseQRankSum=6.157;DP=808;FS=19.339;HRun=0;HaplotypeScore=163.8645;InbreedingCoeff=-0.1920;MQ=55.97;MQ0=19;MQRankSum=0.912;QD=0.90;ReadPosRankSum=0.547;VQSLOD=1.7573;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,3:44:28.23:28,0,380	0/1:11,0:12:1.90:2,0,77	./.	./.	0/0:31,0:30:7.89:0,8,107	0/0:17,1:16:15.03:0,15,185	0/1:29,1:30:5.40:5,0,264	1/1:49,0:49:2.69:9,3,0	0/1:33,1:34:40.29:40,0,209	1/1:41,0:42:2.98:27,3,0	0/1:21,0:20:0:0,0,0	0/1:31,3:33:99:110,0,368	0/0:16,0:15:11.53:0,12,142	0/1:24,0:25:13.58:14,0,184	0/1:38,2:40:52.55:53,0,77	0/1:33,1:34:12.92:13,0,240	0/1:32,2:33:34.76:35,0,229	0/1:22,1:22:23.06:23,0,175	1/1:16,0:15:8.52:42,9,0	1/1:14,0:19:5.68:28,6,0	1/1:53,0:59:11.36:56,11,0	0/1:34,1:35:54.25:54,0,339	0/1:17,2:19:17.38:17,0,143	0/1:24,2:26:43.60:44,0,136	0/1:28,1:29:27.66:28,0,36	1/1:17,0:20:11.40:64,11,0	1/1:15,0:18:5.68:28,6,0	1/1:5,0:8:8.52:42,9,0
chr10	94867200	.	T	TC	8584.32	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-12.800;DP=690;FS=4.626;HRun=1;HaplotypeScore=82.6549;InbreedingCoeff=0.9975;MQ=86.74;MQ0=0;MQRankSum=-3.209;QD=40.68;ReadPosRankSum=3.748;VQSLOD=5.4568;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,174,2193	1/1:0,12:12:33.11:494,33,0	0/0:28,0:28:83.92:0,84,974	0/0:18,0:18:51.12:0,51,637	1/1:1,30:31:84.21:1211,84,0	0/0:19,0:19:54.15:0,54,673	0/0:24,0:24:72.23:0,72,935	0/0:25,0:25:72.23:0,72,934	1/1:1,27:28:69.23:1026,69,0	1/1:3,28:31:84.28:1237,84,0	1/1:1,16:17:51.17:751,51,0	0/0:21,0:21:63.20:0,63,818	0/0:27,0:27:75.22:0,75,945	0/0:33,0:33:96.31:0,96,1245	1/1:1,39:40:99:1663,111,0	1/1:0,26:26:72.24:1079,72,0	0/0:32,0:32:87.24:0,87,1098	0/0:21,0:21:54.18:0,54,701	0/0:15,0:15:42.11:0,42,528	0/0:20,0:20:60.19:0,60,776	0/0:23,0:23:69.19:0,69,866	0/0:13,0:13:36.10:0,36,453	0/0:13,0:13:39.10:0,39,478	0/0:23,0:23:69.20:0,69,880	1/1:0,26:26:75.25:1124,75,0	0/0:20,1:21:15.41:0,15,669	0/0:23,0:23:66.21:0,66,856	0/0:19,0:19:51.17:0,51,662
chr10	94867737	.	A	AG	2474.97	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=1.446;DP=537;FS=6.314;HRun=3;HaplotypeScore=115.3023;InbreedingCoeff=0.9761;MQ=91.80;MQ0=3;MQRankSum=-4.049;QD=22.10;ReadPosRankSum=-1.010;VQSLOD=2.4550;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,42:44:90.30:1245,90,0	1/1:2,3:4:9.02:98,9,0	0/0:46,0:30:56.04:0,56,540	0/0:43,0:30:23.94:0,24,350	1/1:8,6:14:22.97:200,23,0	0/0:14,0:14:33.66:0,34,214	0/0:22,0:22:56.15:0,56,429	0/0:21,0:21:39.66:0,40,333	1/1:2,5:7:20.94:182,21,0	0/0:13,0:13:14.41:0,14,68	0/0:17,0:17:11.91:0,12,119	0/0:20,0:20:37.21:0,37,220	0/0:11,0:11:16.35:0,16,90	0/0:13,0:13:29.06:0,29,195	1/1:8,5:13:31.11:264,31,0	1/1:6,8:14:33.05:322,33,0	0/0:27,0:27:75.19:0,75,871	0/0:14,0:14:36.05:0,36,395	0/0:16,0:16:40.04:0,40,330	0/0:19,0:19:35.52:0,36,311	0/0:20,0:20:50.43:0,50,401	0/0:19,0:19:49.99:0,50,336	0/0:18,0:18:35.94:0,36,236	0/0:23,0:23:63.89:0,64,390	1/1:9,6:15:38.91:359,39,0	0/0:16,0:16:44.60:0,45,354	0/0:20,0:20:36.15:0,36,181	0/0:13,0:13:37.99:0,38,269
chr10	94867740	.	G	GTT	2277.42	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=6.596;DP=557;FS=5.020;HRun=8;HaplotypeScore=132.3574;InbreedingCoeff=0.9779;MQ=92.57;MQ0=3;MQRankSum=-6.512;QD=21.69;ReadPosRankSum=-5.408;VQSLOD=0.8677;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:44:69.79:0,70,275	1/1:3,0:3:9.01:87,9,0	0/0:52,0:36:41.08:0,41,425	0/0:43,0:30:19.88:0,20,253	1/1:14,0:17:30.06:312,30,0	0/0:14,0:14:34.54:0,35,208	0/0:22,0:22:53.22:0,53,388	0/0:21,0:21:9.43:0,9,206	1/1:9,0:9:21.04:213,21,0	1/1:4,9:14:30.05:431,30,0	1/1:9,9:19:42.09:567,42,0	0/0:20,0:20:45.83:0,46,265	0/0:11,0:11:22.31:0,22,110	0/0:14,0:14:25.44:0,25,148	1/1:13,0:14:27.05:276,27,0	1/1:9,0:13:30.05:302,30,0	0/0:28,0:28:78.09:0,78,831	0/0:13,0:13:30.07:0,30,333	0/0:14,0:14:26.74:0,27,219	0/0:19,0:19:28.41:0,28,273	0/0:20,0:20:40.27:0,40,300	0/0:19,0:19:44.09:0,44,292	0/0:19,0:19:36.21:0,36,225	0/0:27,0:27:58.34:0,58,354	1/1:11,0:15:29.95:296,30,0	0/0:16,0:16:38.50:0,39,297	0/0:19,0:19:39.40:0,39,198	0/0:16,0:16:38.33:0,38,284
chr10	94867748	.	T	TG	7445.55	PASS	AB=0.735;AC=45;AF=0.804;AN=56;BaseQRankSum=-4.557;DP=566;FS=0.452;HRun=8;HaplotypeScore=105.1322;InbreedingCoeff=0.6369;MQ=87.60;MQ0=3;MQRankSum=-3.057;QD=17.20;ReadPosRankSum=0.025;VQSLOD=4.3517;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:66.85:0,67,284	1/1:2,0:4:11.97:105,12,0	0/0:47,0:30:2.74:0,3,204	0/1:44,0:30:8.86:9,0,61	1/1:14,0:19:32.70:247,33,0	1/1:2,11:13:30.09:343,30,0	1/1:7,20:27:39.11:447,39,0	1/1:3,18:22:56.96:564,57,0	1/1:6,0:12:35.89:288,36,0	1/1:11,0:12:7.41:37,7,0	1/1:19,0:19:7.56:147,8,0	1/1:3,18:21:46.01:515,46,0	1/1:1,10:11:24.07:275,24,0	1/1:2,11:13:24.07:273,24,0	1/1:2,1:10:23.98:210,24,0	1/1:5,0:13:24.47:213,24,0	0/0:30,0:30:74.94:0,75,660	0/0:10,0:10:27.01:0,27,247	1/1:2,10:12:21.03:221,21,0	1/1:6,16:23:47.33:439,47,0	0/1:8,12:20:18.71:294,0,19	1/1:3,18:21:42.07:466,42,0	1/1:2,18:20:38.75:412,39,0	1/1:4,25:29:57.16:654,57,0	1/1:7,0:13:21.91:162,22,0	1/1:4,11:15:30.07:335,30,0	1/1:0,21:21:45.13:515,45,0	0/1:5,13:18:0.33:278,0,0
chr10	94867750	.	G	GT	1530.75	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=2.874;DP=552;FS=2.741;HRun=0;HaplotypeScore=119.5944;InbreedingCoeff=0.0521;MQ=86.85;MQ0=3;MQRankSum=-4.426;QD=4.04;ReadPosRankSum=7.853;VQSLOD=2.8834;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,108,1159	0/1:5,0:4:1.49:4,0,1	0/0:47,0:30:39.53:0,40,598	0/0:42,0:28:40.20:0,40,284	0/1:19,0:19:27.94:35,0,28	1/1:12,0:12:0.62:71,1,0	0/1:24,0:24:55.38:55,0,61	0/1:22,0:22:43.95:93,0,44	1/1:12,0:12:1.17:11,1,0	1/1:10,1:11:9.42:169,9,0	1/1:8,10:18:28.05:325,28,0	1/1:21,0:21:3.11:85,3,0	1/1:10,0:10:20.20:88,20,0	1/1:12,0:12:19.90:85,20,0	1/1:11,0:11:15.30:45,15,0	1/1:13,0:13:14.04:49,14,0	0/0:29,0:29:84.24:0,84,1116	0/0:11,0:11:30.07:0,30,398	0/1:12,0:12:13.21:13,0,76	0/1:22,0:22:46.58:47,0,76	0/1:18,0:18:34.70:35,0,128	0/1:20,0:20:14.94:74,0,15	1/1:20,0:20:4.13:85,4,0	0/1:31,0:31:67.76:90,0,68	0/1:12,0:12:10.65:11,0,12	0/1:15,0:15:36.58:37,0,46	1/1:21,0:21:38.07:160,38,0	0/1:18,0:18:42.33:42,0,90
chr10	94867807	.	CA	C	2826.88	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.244;DP=538;FS=7.751;HRun=1;HaplotypeScore=75.5992;InbreedingCoeff=0.9960;MQ=78.37;MQ0=1;MQRankSum=-2.632;QD=33.65;ReadPosRankSum=1.858;VQSLOD=3.2472;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,108,1666	1/1:0,6:6:15.05:209,15,0	0/0:26,0:23:59.77:0,60,788	0/0:22,0:17:31.91:0,32,487	1/1:2,20:23:51.03:667,51,0	0/0:11,0:11:33.11:0,33,525	0/0:23,0:23:54.16:0,54,816	0/0:24,0:24:72.21:0,72,1066	1/1:0,10:10:30.10:411,30,0	0/0:17,0:17:51.17:0,51,814	0/0:20,0:20:51.17:0,51,793	0/0:18,0:18:48.14:0,48,715	0/0:13,0:13:36.11:0,36,549	0/0:14,0:14:33.11:0,33,523	1/1:1,11:12:36.07:475,36,0	1/1:1,13:14:38.86:499,39,0	0/0:17,0:17:51.17:0,51,814	0/0:13,0:13:39.06:0,39,585	0/0:23,0:23:63.20:0,63,973	0/0:18,0:18:51.10:0,51,747	0/0:16,0:16:48.15:0,48,733	0/0:22,0:22:63.20:0,63,982	0/0:22,0:22:47.94:0,48,741	0/0:37,0:37:96.13:0,96,1467	1/1:1,18:19:54.18:752,54,0	0/0:18,0:18:54.18:0,54,838	0/0:27,0:27:69.19:0,69,1042	0/0:12,0:12:24.07:0,24,358
chr10	94867928	.	AGT	A	946.29	PASS	AB=0.842;AC=12;AF=0.222;AN=54;BaseQRankSum=-0.037;DP=596;FS=21.106;HRun=0;HaplotypeScore=96.1082;InbreedingCoeff=0.5426;MQ=56.47;MQ0=22;MQRankSum=3.625;QD=5.95;ReadPosRankSum=3.741;VQSLOD=1.5849;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,14:34:16.10:189,16,0	0/0:7,0:7:6.49:0,6,92	0/0:40,0:20:5.95:0,6,55	./.	0/0:29,0:28:33.11:0,33,487	0/0:5,0:22:16.52:0,17,108	0/0:8,0:23:8.58:0,9,72	0/0:21,0:21:8.70:0,9,82	0/0:10,0:10:23.96:0,24,313	1/1:10,0:23:14.20:70,14,0	1/1:3,0:11:2.84:14,3,0	0/0:7,0:18:22.47:0,22,135	0/0:4,0:10:17.67:0,18,140	0/0:7,0:22:23.04:0,23,161	0/1:13,4:16:46.21:46,0,191	0/1:18,3:21:37.21:37,0,312	1/1:9,19:31:59.33:574,59,0	1/1:9,9:19:3.42:174,3,0	0/0:15,0:13:5.96:0,6,45	0/0:10,0:22:6:0,6,53	0/0:27,0:27:5.37:0,5,35	0/0:11,0:23:7.78:0,8,44	0/0:12,0:11:5.99:0,6,48	0/0:12,0:26:20.99:0,21,183	0/0:15,0:15:23.87:0,24,333	0/0:12,0:12:19.10:0,19,152	0/0:15,0:27:8.74:0,9,63	0/0:7,0:13:15.01:0,15,143
chr10	94868251	.	AGT	A	1501.09	PASS	AB=0.909;AC=21;AF=0.404;AN=52;BaseQRankSum=2.235;DP=631;FS=0.000;HRun=0;HaplotypeScore=91.2674;InbreedingCoeff=0.8096;MQ=64.92;MQ0=12;MQRankSum=0.605;QD=6.73;ReadPosRankSum=1.230;VQSLOD=3.2066;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:21:0,21,208	0/0:5,0:11:17.99:0,18,172	./.	./.	0/0:15,0:29:21.01:0,21,217	1/1:12,7:19:11.65:113,12,0	1/1:17,5:23:16.12:150,16,0	0/0:27,0:27:29.90:0,30,295	0/0:18,0:26:15.01:0,15,165	1/1:19,0:24:11.36:56,11,0	1/1:6,0:11:8.52:42,9,0	1/1:10,10:21:23.90:245,24,0	1/1:14,5:19:15.04:165,15,0	1/1:13,6:19:18.05:198,18,0	0/0:21,0:32:21.01:0,21,220	0/0:14,0:22:27.03:0,27,309	0/0:21,0:22:21.96:0,22,453	0/1:18,2:20:33.03:33,0,319	0/0:15,0:19:30.02:0,30,330	0/0:16,0:21:6.01:0,6,56	0/0:19,0:21:11.96:0,12,97	1/1:6,7:13:17.88:179,18,0	1/1:13,8:20:9.02:99,9,0	1/1:15,16:30:0.52:418,1,0	0/0:10,0:20:21.03:0,21,235	0/0:21,0:30:45:0,45,473	0/0:11,0:17:11.97:0,12,98	0/0:12,0:12:14.92:0,15,142
chr10	94868278	.	G	GTGTG	1386.64	PASS	AB=1.000;AC=24;AF=0.444;AN=54;BaseQRankSum=-5.360;DP=686;FS=7.739;HRun=0;HaplotypeScore=122.8205;InbreedingCoeff=0.3053;MQ=52.90;MQ0=28;MQRankSum=0.218;QD=3.54;ReadPosRankSum=-1.620;VQSLOD=1.6555;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:34:17.60:311,18,0	0/1:12,0:11:32.83:35,0,33	1/1:46,0:13:0.89:2,1,0	./.	0/1:31,0:31:32.57:35,0,33	0/0:19,0:18:11.42:0,11,111	0/0:24,0:24:15.02:0,15,140	1/1:34,0:33:5.44:14,5,0	0/1:29,0:29:3.46:3,0,85	0/0:26,0:26:12.01:0,12,112	0/0:11,0:11:9.01:0,9,84	0/0:19,0:19:24.03:0,24,223	0/0:25,0:25:15.02:0,15,140	0/0:18,0:18:18.02:0,18,168	0/1:25,0:25:32.01:32,0,77	0/1:20,0:20:37.22:37,0,118	0/0:24,0:24:33.10:0,33,487	0/1:23,0:23:13.87:14,0,266	1/1:19,0:16:9.01:160,9,0	1/1:17,0:16:5.51:80,6,0	1/1:14,4:18:8.77:139,9,0	0/0:26,0:25:17.97:0,18,158	0/0:20,0:19:8.64:0,9,84	0/0:35,0:34:44.74:0,45,412	0/1:24,0:24:28.91:29,0,87	1/1:24,0:23:24.02:406,24,0	1/1:23,0:23:9.03:210,9,0	0/1:11,0:11:9.15:60,0,9
chr10	94868662	.	CT	C	10255.73	PASS	AB=0.749;AC=44;AF=0.786;AN=56;BaseQRankSum=8.155;DP=610;FS=0.000;HRun=10;HaplotypeScore=69.2866;InbreedingCoeff=0.7752;MQ=74.26;MQ0=0;MQRankSum=-2.779;QD=20.39;ReadPosRankSum=2.705;VQSLOD=5.7397;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,51:56:99:1224,141,0	1/1:1,13:14:35.91:312,36,0	0/1:22,2:19:17.85:18,0,229	0/0:16,0:13:14.88:0,15,132	1/1:3,29:32:80.97:703,81,0	1/1:2,16:18:44.99:391,45,0	1/1:3,15:18:38.99:339,39,0	1/1:1,16:17:47.99:417,48,0	1/1:2,18:20:47.98:417,48,0	0/0:21,0:21:54.14:0,54,596	0/0:14,1:15:10.04:0,10,339	1/1:2,16:18:38.99:339,39,0	1/1:2,20:22:38.62:497,39,0	1/1:2,12:14:26.99:234,27,0	1/1:3,18:21:47.98:417,48,0	1/1:1,13:14:38.99:339,39,0	0/0:34,0:34:93.21:0,93,1009	0/0:21,0:21:54.15:0,54,596	1/1:4,14:18:41.97:361,42,0	1/1:0,22:22:59.98:520,60,0	1/1:2,11:13:29.99:260,30,0	1/1:4,15:20:41.02:345,41,0	1/1:2,25:27:74.98:651,75,0	1/1:0,23:23:59.99:521,60,0	1/1:4,22:26:68.95:593,69,0	1/1:2,25:27:74.97:647,75,0	1/1:1,19:20:50.99:443,51,0	0/1:5,14:19:24.13:271,0,24
chr10	94869104	.	AG	A	5878.71	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=8.661;DP=694;FS=2.370;HRun=2;HaplotypeScore=80.1269;InbreedingCoeff=0.9995;MQ=84.73;MQ0=0;MQRankSum=-3.481;QD=36.51;ReadPosRankSum=3.975;VQSLOD=5.5089;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1664	1/1:0,8:8:24.08:312,24,0	0/0:30,0:30:87.28:0,87,1255	0/0:30,0:30:87.28:0,87,1251	1/1:0,15:15:39.13:506,39,0	0/0:22,0:22:60.20:0,60,899	0/0:35,0:35:99:0,102,1523	0/0:30,0:30:90.30:0,90,1349	1/1:0,25:25:69.22:894,69,0	1/1:1,25:26:75.24:974,75,0	1/1:0,16:16:45.15:583,45,0	0/0:36,0:36:99:0,105,1517	0/0:13,0:13:36.11:0,36,518	0/0:20,0:20:57.18:0,57,834	1/1:0,27:27:81.26:1052,81,0	1/1:0,24:24:69.22:896,69,0	0/0:36,0:36:99:0,108,1607	0/0:34,0:34:99:0,99,1484	0/0:30,0:30:87.24:0,87,1259	0/0:24,0:24:72.24:0,72,1078	0/0:31,0:31:93.32:0,93,1393	0/0:14,0:14:42.14:0,42,625	0/0:20,0:20:54.18:0,54,809	0/0:29,0:29:87.29:0,87,1294	1/1:0,20:20:51.17:662,51,0	0/0:23,1:24:33.29:0,33,994	0/0:26,0:26:75.25:0,75,1124	0/0:10,0:10:30.10:0,30,444
chr10	94869411	.	CTGTTTTTTTTTT	C	6136.79	PASS	AB=0.983;AC=23;AF=0.411;AN=56;BaseQRankSum=14.246;DP=479;FS=23.501;HRun=0;HaplotypeScore=162.8764;InbreedingCoeff=-0.5910;MQ=64.96;MQ0=12;MQRankSum=-10.199;QD=18.00;ReadPosRankSum=9.536;VQSLOD=1.4780;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:40:99:193,0,459	0/0:3,0:3:8.94:0,9,65	0/0:43,0:19:18.77:0,19,966	0/0:36,0:16:33.33:0,33,409	0/1:10,0:10:17.73:356,0,18	0/1:17,0:17:99:243,0,181	0/1:19,0:19:99:374,0,206	0/0:25,0:25:35.97:0,36,526	0/1:19,0:19:37.36:636,0,37	0/1:16,2:17:64.20:64,0,228	0/1:11,0:10:84.44:151,0,84	0/1:13,0:13:99:179,0,171	0/1:9,0:9:57.56:193,0,58	0/1:17,2:19:99:511,0,151	0/1:17,0:17:99:209,0,150	0/1:11,0:11:49.52:338,0,50	0/0:14,0:14:39.08:0,39,1538	0/0:17,0:17:48.12:0,48,1523	0/1:22,2:23:99:402,0,275	0/1:12,0:12:79.92:273,0,80	0/1:19,0:18:99:123,0,221	0/1:10,0:10:61.62:199,0,62	0/1:16,0:16:99:396,0,128	0/1:15,0:15:99:181,0,101	0/1:13,0:14:56.18:448,0,56	0/1:10,0:9:62.23:261,0,62	0/1:17,0:17:98.55:399,0,99	1/1:1,0:1:2.22:7,2,0
chr10	94870231	.	A	ATGCG	5337.64	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-5.730;DP=564;FS=5.918;HRun=0;HaplotypeScore=101.9584;InbreedingCoeff=0.9796;MQ=67.50;MQ0=2;MQRankSum=-2.110;QD=32.75;ReadPosRankSum=-1.282;VQSLOD=4.4168;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:66.20:0,66,1069	0/0:6,0:6:9.03:0,9,150	0/0:22,0:16:26.17:0,26,374	0/0:21,0:21:20.24:0,20,331	0/0:17,0:17:42.01:0,42,672	0/0:23,0:23:57.13:0,57,863	0/0:33,0:33:66.11:0,66,985	1/1:13,12:27:44.87:687,45,0	0/0:18,0:18:39.13:0,39,644	0/0:13,0:13:33.11:0,33,549	0/0:21,0:21:51.14:0,51,798	0/0:20,0:20:60.15:0,60,909	0/0:12,0:12:15.04:0,15,225	0/0:21,0:21:57.15:0,57,876	0/0:13,0:13:24.07:0,24,369	0/0:6,0:6:15.03:0,15,224	0/0:39,0:39:87.15:0,87,1347	0/0:24,0:24:60.11:0,60,889	1/1:11,9:22:29.93:507,30,0	1/1:7,15:22:36.12:887,36,0	1/1:11,14:27:18.06:435,18,0	0/0:12,0:12:27.08:0,27,426	0/0:17,0:17:42.14:0,42,692	0/0:17,0:17:33.09:0,33,510	0/0:14,0:14:36.10:0,36,542	1/1:6,17:23:48.16:1048,48,0	1/1:2,19:21:51.18:1256,51,0	1/1:9,9:21:21.07:518,21,0
chr10	94871142	.	TGCAC	T	98.71	PASS	AB=0.910;AC=9;AF=0.167;AN=54;BaseQRankSum=3.128;DP=583;FS=3.820;HRun=0;HaplotypeScore=240.3064;InbreedingCoeff=0.3463;MQ=53.60;MQ0=4;MQRankSum=-5.444;QD=1.16;ReadPosRankSum=-5.791;VQSLOD=1.2105;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:2.89:0,3,262	1/1:6,1:7:2.87:57,3,0	0/0:38,0:24:58.32:0,58,1137	0/0:29,0:18:42.14:0,42,925	0/1:12,1:13:11.98:12,0,59	0/0:15,0:15:18.91:0,19,414	0/0:49,0:48:59.66:0,60,931	0/0:26,0:24:52.31:0,52,770	1/1:13,0:13:8.24:94,8,0	0/0:32,0:32:57.30:0,57,1030	0/0:13,0:13:12.02:0,12,201	0/0:33,0:32:18.15:0,18,1007	0/0:21,0:21:39.01:0,39,580	0/0:19,0:19:30.07:0,30,457	0/1:11,4:15:0.20:0,0,0	0/1:12,3:15:22.23:50,0,22	0/0:44,0:44:99:0,129,3217	0/0:20,0:20:54.17:0,54,1407	0/0:21,0:21:23.13:0,23,652	0/0:9,0:9:11.75:0,12,143	0/0:41,0:41:15.26:0,15,266	0/1:9,0:10:1.69:2,0,23	0/0:7,0:7:9.02:0,9,134	0/1:12,0:12:1.17:1,0,170	./.	0/0:21,0:21:45.31:0,45,841	0/0:10,0:10:15.93:0,16,376	0/0:17,0:17:16.88:0,17,636
chr10	94871144	.	C	CGTGTGTGTGTGT	1170.62	PASS	AB=1.000;AC=20;AF=0.370;AN=54;BaseQRankSum=10.633;DP=568;FS=8.189;HRun=0;HaplotypeScore=319.7680;InbreedingCoeff=0.0545;MQ=53.49;MQ0=4;MQRankSum=-8.293;QD=5.27;ReadPosRankSum=2.284;VQSLOD=0.8529;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:15.43:0,15,182	1/1:3,0:7:1.20:111,1,0	0/0:44,0:26:38.72:0,39,1219	0/0:28,0:17:39.07:0,39,1294	1/1:6,3:9:2.99:24,3,0	0/1:14,0:14:33.45:33,0,200	0/0:47,0:46:32.83:0,33,671	0/0:24,0:22:40.25:0,40,660	0/0:3,9:13:4.66:0,5,13	0/0:30,0:30:0.91:0,1,599	0/1:12,0:12:41.86:46,0,42	0/1:32,0:31:99:124,0,401	0/1:21,0:21:5.79:6,0,398	0/1:19,0:19:34.50:137,0,35	1/1:6,0:14:6.02:160,6,0	1/1:4,6:15:6.81:445,7,0	0/0:46,0:46:99:0,129,4405	0/0:20,0:20:54.19:0,54,1976	0/0:19,0:19:21.42:0,21,586	1/1:9,0:9:3.67:53,4,0	0/0:37,0:37:15.02:0,15,240	0/1:10,0:10:18.18:18,0,25	0/0:7,0:7:9.02:0,9,134	0/1:12,0:12:0.17:0,0,180	./.	0/1:21,0:21:63.21:63,0,579	0/1:10,0:10:88.76:89,0,157	0/1:17,0:17:19.32:19,0,174
chr10	94871145	.	A	ACGCGCGCGCT	17041.54	PASS	AB=1.000;AC=38;AF=0.731;AN=52;BaseQRankSum=5.700;DP=577;FS=20.929;HRun=0;HaplotypeScore=259.3269;InbreedingCoeff=0.6799;MQ=51.59;MQ0=4;MQRankSum=-9.620;QD=42.50;ReadPosRankSum=-2.501;VQSLOD=2.9740;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,5:27:3.24:263,3,0	0/1:7,0:7:3.57:4,0,73	0/0:44,0:25:57.27:0,57,1174	0/0:27,0:16:39.13:0,39,1153	./.	1/1:11,3:14:24.08:911,24,0	1/1:46,2:46:44.26:1807,44,0	1/1:24,0:22:46.27:1114,46,0	0/0:13,0:13:9.03:0,9,251	1/1:31,0:31:54.20:1358,54,0	1/1:12,0:12:4.67:249,5,0	1/1:22,11:32:57.12:2224,57,0	1/1:17,4:21:38.31:1026,38,0	1/1:13,6:19:27.09:1348,27,0	0/0:13,0:13:5.44:0,5,24	0/1:13,0:13:67.93:92,0,68	0/0:46,0:46:99:0,123,3698	0/0:19,0:19:54.14:0,54,1680	1/1:19,2:21:50.65:1336,51,0	1/1:7,3:10:8.77:321,9,0	1/1:40,2:42:11.91:67,12,0	1/1:7,2:9:5.04:45,5,0	1/1:6,0:6:3.01:45,3,0	1/1:10,2:12:9.02:204,9,0	./.	1/1:21,1:22:54.10:1871,54,0	1/1:7,4:12:32.94:1029,33,0	1/1:12,6:18:45.06:1727,45,0
chr10	94871149	.	G	GCGCGC	6647.74	PASS	AB=0.915;AC=29;AF=0.537;AN=54;BaseQRankSum=6.141;DP=674;FS=30.401;HRun=0;HaplotypeScore=318.1549;InbreedingCoeff=0.0373;MQ=45.49;MQ0=5;MQRankSum=-5.969;QD=14.11;ReadPosRankSum=3.167;VQSLOD=3.1900;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,6:30:20.73:202,0,21	0/0:9,0:9:3.95:0,4,68	0/0:45,0:25:64.01:0,64,1096	0/0:30,0:19:45.10:0,45,887	0/1:15,0:15:45.60:57,0,46	1/1:18,3:21:16.04:406,16,0	1/1:44,15:56:42.81:920,43,0	0/1:30,2:29:99:223,0,326	0/0:21,0:21:20.98:0,21,306	0/1:22,0:27:60.76:478,0,61	1/1:8,0:11:6.49:123,6,0	1/1:28,8:35:43.64:995,44,0	1/1:18,4:22:1.08:541,1,0	1/1:15,8:23:24.07:521,24,0	0/0:21,0:21:1.25:0,1,4	0/1:19,0:18:15.81:16,0,62	0/0:47,0:47:99:0,135,2793	0/0:20,0:20:60.01:0,60,1240	0/1:20,1:21:99:322,0,201	1/1:7,2:9:7.81:154,8,0	0/1:32,8:40:31.90:39,0,32	1/1:17,5:22:5.61:41,6,0	1/1:4,3:7:3.01:45,3,0	0/1:20,2:21:27.53:120,0,28	./.	0/1:16,4:19:99:445,0,185	0/1:15,0:15:84.44:298,0,84	0/1:16,2:18:51.53:701,0,52
chr10	94871150	.	T	TCGC	1962.28	PASS	AB=0.904;AC=22;AF=0.407;AN=54;BaseQRankSum=9.077;DP=675;FS=7.872;HRun=0;HaplotypeScore=319.9578;InbreedingCoeff=-0.0993;MQ=45.28;MQ0=5;MQRankSum=-6.503;QD=4.82;ReadPosRankSum=5.413;VQSLOD=0.9147;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:30:25.17:83,0,25	0/0:9,0:9:5.85:0,6,64	0/0:45,0:25:65.61:0,66,969	0/0:32,0:20:49.56:0,50,752	0/1:15,0:15:38.41:38,0,49	1/1:18,1:21:16.74:168,17,0	0/1:43,14:55:20.33:262,0,20	0/1:30,0:29:45.15:45,0,301	0/0:21,0:21:24.02:0,24,310	0/1:27,0:27:0.78:1,0,291	1/1:12,0:11:8.50:44,8,0	0/1:27,5:34:33.06:380,0,33	0/1:18,3:22:30.04:162,0,30	1/1:17,8:25:26.02:278,26,0	0/0:22,0:22:5.34:0,5,19	0/1:19,0:18:7.16:7,0,63	0/0:48,0:48:99:0,135,2250	0/0:20,0:20:41.19:0,41,962	0/1:19,0:20:67.38:67,0,95	0/1:7,0:9:10.65:68,0,11	0/0:31,1:39:12.25:0,12,64	0/0:17,5:22:1.81:0,2,19	1/1:4,2:7:1.23:3,1,0	0/1:19,2:20:22.04:22,0,35	./.	0/1:16,0:19:93.88:94,0,152	0/1:15,0:15:15.52:126,0,16	0/1:16,0:18:3.11:275,0,3
chr10	94871151	.	G	GCGC	2684.92	PASS	AB=0.988;AC=22;AF=0.393;AN=56;BaseQRankSum=8.001;DP=674;FS=22.580;HRun=0;HaplotypeScore=317.2944;InbreedingCoeff=-0.1308;MQ=43.71;MQ0=5;MQRankSum=-6.918;QD=6.60;ReadPosRankSum=4.221;VQSLOD=0.9488;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:30:59:112,0,59	0/0:10,0:10:8:0,8,75	0/0:43,0:23:64.13:0,64,961	0/0:33,0:21:53.62:0,54,824	0/1:15,0:15:38.39:38,0,82	1/1:21,0:21:20.65:200,21,0	0/1:55,2:54:23.79:386,0,24	0/1:31,1:29:95.81:96,0,517	0/0:21,0:21:24.05:0,24,351	0/1:26,0:26:99:150,0,382	1/1:13,0:12:8.95:73,9,0	0/1:35,0:33:33.51:375,0,34	0/1:21,0:21:28.34:254,0,28	1/1:24,1:25:25.94:233,26,0	0/0:23,0:23:5.91:0,6,21	0/1:19,0:18:4.69:5,0,74	0/0:47,0:47:99:0,129,2268	0/0:19,0:19:57.17:0,57,1006	0/1:20,0:20:99:128,0,266	0/1:11,0:11:14.17:59,0,14	0/0:38,0:38:9.98:0,10,73	0/0:22,0:22:1.82:0,2,21	1/1:7,0:7:2.98:25,3,0	0/1:22,0:21:34.54:35,0,73	0/0:11,0:11:0.89:0,1,2	0/1:20,0:19:99:234,0,260	0/1:14,0:14:78.13:89,0,78	0/1:16,2:18:88.21:361,0,88
chr10	94871153	.	G	GC	197.74	PASS	AB=0.986;AC=14;AF=0.250;AN=56;BaseQRankSum=4.261;DP=675;FS=5.427;HRun=0;HaplotypeScore=278.3767;InbreedingCoeff=-0.0857;MQ=41.06;MQ0=7;MQRankSum=-6.522;QD=0.61;ReadPosRankSum=-4.090;VQSLOD=1.4340;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:29:7.91:8,0,132	0/0:11,0:11:11.64:0,12,110	0/0:42,0:22:55.93:0,56,680	0/0:33,0:21:58.89:0,59,687	0/1:15,0:15:5.68:6,0,71	0/1:18,1:19:9.59:10,0,47	1/1:52,2:51:13.10:110,13,0	0/0:32,0:29:11.20:0,11,650	0/0:21,0:21:15.05:0,15,208	0/0:24,0:24:65.11:0,65,675	0/1:13,0:12:1.20:3,0,1	0/1:33,1:32:9.01:9,0,175	0/1:21,0:20:38.72:49,0,39	0/1:26,1:26:8.71:9,0,65	0/0:24,0:24:13.09:0,13,117	0/0:18,0:17:8.34:0,8,90	0/0:49,0:49:99:0,129,1706	0/0:21,0:21:57.19:0,57,781	0/0:20,1:20:7.47:0,7,387	0/1:12,0:11:10.34:10,0,46	0/1:38,0:38:32.14:32,0,73	0/1:23,0:23:1.21:1,0,44	0/0:6,0:6:2.22:0,2,7	0/0:21,0:20:3.77:0,4,83	0/0:13,0:13:5.50:0,6,46	0/1:17,1:17:32.96:33,0,323	0/0:14,0:14:19.75:0,20,205	0/1:20,0:18:62.08:62,0,200
chr10	94871162	.	T	TG	4343.61	PASS	AB=0.818;AC=25;AF=0.446;AN=56;BaseQRankSum=10.498;DP=705;FS=1.256;HRun=1;HaplotypeScore=270.9656;InbreedingCoeff=0.0180;MQ=43.00;MQ0=12;MQRankSum=-8.398;QD=9.24;ReadPosRankSum=1.100;VQSLOD=2.5514;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,8:33:49.81:153,0,50	0/0:12,0:12:13.34:0,13,138	0/0:45,0:25:48.17:0,48,637	0/0:32,0:21:57.13:0,57,694	0/1:16,0:16:2.68:3,0,86	0/1:12,7:19:46.77:88,0,47	0/1:39,18:54:93.65:94,0,230	0/1:25,7:29:99:637,0,102	0/0:19,0:19:18.05:0,18,218	1/1:11,16:26:63.47:880,63,0	1/1:4,9:12:8.06:94,8,0	0/1:27,7:32:59.18:429,0,59	0/1:15,6:20:31.46:174,0,31	0/1:23,5:27:17.60:255,0,18	0/0:24,0:24:13.81:0,14,153	0/0:20,0:19:11.13:0,11,140	0/0:52,0:52:99:0,136,1675	0/0:19,0:19:54.16:0,54,675	0/1:21,0:20:99:150,0,214	1/1:10,2:11:16.26:136,16,0	1/1:36,3:38:6.05:128,6,0	0/1:10,15:25:12.08:69,0,12	1/1:5,1:6:2.68:11,3,0	0/1:13,13:24:24.31:91,0,24	0/0:12,0:12:12.04:0,12,152	0/1:16,4:18:76.90:297,0,77	1/1:13,2:15:35.38:338,35,0	0/1:20,2:20:99:319,0,118
chr10	94871164	.	T	TG	1350.65	PASS	AB=0.967;AC=18;AF=0.321;AN=56;BaseQRankSum=11.468;DP=704;FS=4.832;HRun=1;HaplotypeScore=280.0449;InbreedingCoeff=0.0203;MQ=44.18;MQ0=12;MQRankSum=-8.678;QD=3.88;ReadPosRankSum=6.525;VQSLOD=0.1790;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:33:20.02:0,20,426	0/0:13,0:13:17.16:0,17,175	0/0:44,0:25:62.94:0,63,746	0/0:30,0:20:54.07:0,54,629	0/1:16,0:16:2.68:3,0,87	0/1:19,0:19:26.29:26,0,287	0/0:57,0:54:19.92:0,20,414	0/1:29,2:29:64.27:169,0,64	0/0:19,0:19:18.05:0,18,217	0/1:28,0:27:0.70:196,0,1	1/1:13,0:12:7.94:43,8,0	0/1:34,0:32:99:183,0,133	0/1:19,0:20:63.47:63,0,107	0/1:28,0:27:65.56:98,0,66	0/0:25,0:25:15.37:0,15,160	0/0:20,0:19:14.15:0,14,182	0/0:50,0:50:99:0,136,1676	0/0:18,0:18:51.15:0,51,638	0/1:19,1:20:99:110,0,118	1/1:13,0:12:11.99:86,12,0	0/1:37,2:38:80.61:81,0,92	0/0:25,0:25:8.90:0,9,165	0/0:7,0:7:2.99:0,3,23	0/1:27,0:25:31.83:32,0,81	0/0:11,0:11:12.04:0,12,152	0/1:18,1:18:63.27:108,0,63	1/1:14,1:15:9.31:160,9,0	0/1:22,0:20:99:160,0,141
chr10	94871166	.	T	TG	1063.03	PASS	AB=0.832;AC=14;AF=0.250;AN=56;BaseQRankSum=12.026;DP=707;FS=2.518;HRun=1;HaplotypeScore=284.9727;InbreedingCoeff=-0.1990;MQ=43.09;MQ0=12;MQRankSum=-6.586;QD=3.59;ReadPosRankSum=4.286;VQSLOD=0.2409;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,12:36:53.51:0,54,679	0/0:14,0:14:16.10:0,16,162	0/0:43,0:24:53.85:0,54,751	0/0:27,0:17:48.03:0,48,565	0/1:16,0:16:2.68:3,0,87	0/1:18,1:19:20.73:21,0,368	0/0:52,3:52:20.49:0,20,486	0/1:26,6:29:86.50:87,0,384	0/0:19,0:19:15.89:0,16,164	0/0:29,0:28:10.15:0,10,415	1/1:14,0:13:4.53:16,5,0	0/1:32,2:32:99:135,0,183	0/1:22,0:21:29.94:30,0,222	0/1:28,0:27:66.63:67,0,147	0/0:24,0:24:16.82:0,17,193	0/0:21,0:20:15.40:0,15,193	0/0:49,0:49:99:0,133,1651	0/0:18,0:18:51.15:0,51,636	0/1:12,8:19:99:284,0,176	0/1:8,5:12:22.08:51,0,22	0/1:23,18:40:43.79:44,0,126	0/0:26,0:27:22.85:0,23,286	0/0:7,0:7:3.01:0,3,38	0/0:27,0:25:6.40:0,6,125	0/0:11,0:11:12.04:0,12,152	0/1:14,6:18:99:147,0,122	0/1:8,7:15:56.20:164,0,56	0/1:11,11:20:99:168,0,114
chr10	94871172	.	CGCGT	C	6421.74	PASS	AB=0.948;AC=37;AF=0.661;AN=56;BaseQRankSum=3.143;DP=630;FS=2.994;HRun=0;HaplotypeScore=253.0937;InbreedingCoeff=0.1000;MQ=47.96;MQ0=12;MQRankSum=-7.715;QD=12.72;ReadPosRankSum=-0.435;VQSLOD=4.0677;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,5:33:61.72:894,62,0	0/1:12,0:12:14.05:78,0,14	0/0:38,0:23:57.04:0,57,1150	0/0:24,0:15:33.09:0,33,748	0/1:13,0:13:12.45:12,0,117	1/1:15,2:17:28.46:502,28,0	1/1:42,1:41:14.56:558,15,0	1/1:22,7:26:53.37:664,53,0	0/1:10,0:10:12.97:13,0,44	1/1:22,5:26:19.16:737,19,0	1/1:10,2:11:6.76:34,7,0	0/1:31,2:31:22.39:327,0,22	1/1:16,2:17:26.88:385,27,0	0/1:21,3:23:11.89:220,0,12	0/1:24,0:24:44.20:69,0,44	0/1:18,0:17:76:113,0,76	0/0:46,0:46:99:0,120,2848	0/0:17,0:17:42.14:0,42,1024	1/1:12,2:13:4.79:132,5,0	0/1:11,2:12:28.72:94,0,29	0/1:35,2:36:48.09:246,0,48	1/1:24,2:26:26.33:462,26,0	1/1:4,2:6:3.01:48,3,0	0/1:23,4:25:6.17:148,0,6	1/1:12,0:12:11.59:85,12,0	0/1:18,2:18:14.01:253,0,14	1/1:12,3:15:15.37:220,15,0	1/1:17,1:16:15.09:130,15,0
chr10	94871174	.	CGT	C	5837.71	PASS	AB=0.959;AC=43;AF=0.768;AN=56;BaseQRankSum=4.777;DP=637;FS=3.467;HRun=0;HaplotypeScore=246.9053;InbreedingCoeff=0.4428;MQ=52.12;MQ0=12;MQRankSum=-6.473;QD=11.29;ReadPosRankSum=2.753;VQSLOD=4.4916;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,5:34:57.06:595,57,0	1/1:10,0:10:22.61:274,23,0	0/0:39,0:24:68.80:0,69,974	0/0:23,0:15:34.91:0,35,546	0/1:13,0:13:17.89:82,0,18	1/1:17,1:18:36.99:354,37,0	1/1:41,2:41:11.01:334,11,0	1/1:29,0:26:43.69:474,44,0	1/1:12,0:11:14.93:131,15,0	1/1:22,5:26:35.57:538,36,0	1/1:10,2:11:8.22:39,8,0	1/1:33,2:33:5.94:284,6,0	1/1:18,1:18:34.25:292,34,0	1/1:24,1:24:19:201,19,0	1/1:25,0:25:31.41:338,31,0	1/1:18,0:17:18.64:309,19,0	0/0:44,0:44:99:0,122,2015	0/0:14,0:14:42.11:0,42,710	0/1:13,1:13:48.96:100,0,49	0/1:12,1:12:20.76:64,0,21	0/1:40,1:40:62.26:219,0,62	1/1:26,0:26:20.09:277,20,0	1/1:6,0:6:3:29,3,0	1/1:26,1:25:14.34:114,14,0	1/1:12,0:12:15.05:216,15,0	0/1:20,1:19:10.92:199,0,11	1/1:14,1:15:21.84:213,22,0	1/1:17,1:16:23.71:160,24,0
chr10	94871176	.	T	TGTGC	7341.74	PASS	AB=0.995;AC=41;AF=0.732;AN=56;BaseQRankSum=10.498;DP=644;FS=3.568;HRun=0;HaplotypeScore=261.7788;InbreedingCoeff=0.3720;MQ=55.03;MQ0=11;MQRankSum=-10.579;QD=13.98;ReadPosRankSum=-1.707;VQSLOD=4.1259;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,12:35:57.95:410,58,0	0/1:10,0:10:34.28:34,0,95	0/0:39,0:25:62.57:0,63,982	0/0:23,0:15:41.91:0,42,726	0/1:13,0:13:51.87:52,0,63	1/1:14,2:18:43.10:352,43,0	1/1:40,2:42:27:285,27,0	1/1:23,4:27:65.91:716,66,0	0/1:12,0:11:10.44:10,0,41	1/1:28,0:27:52.88:472,53,0	1/1:13,0:12:8.99:107,9,0	1/1:23,2:34:54.95:861,55,0	1/1:17,1:19:35.76:388,36,0	1/1:20,1:26:34.21:466,34,0	0/1:21,0:21:84.79:85,0,96	0/1:18,0:17:99:128,0,115	0/0:42,0:42:99:0,120,2317	0/0:15,0:15:42.14:0,42,816	1/1:11,4:14:27.28:329,27,0	1/1:8,5:12:15.31:192,15,0	1/1:25,16:40:30.50:323,31,0	1/1:24,0:27:30.81:193,31,0	1/1:6,0:6:2.84:14,3,0	0/1:26,0:25:18.53:116,0,19	0/1:13,0:13:4.86:5,0,76	1/1:15,6:20:40.51:618,41,0	1/1:7,8:15:38.25:577,38,0	1/1:7,10:16:31.78:609,32,0
chr10	94871539	.	ACACATGCTTGGATCCTCATGACCCATGTAAGAG	A	8422.14	PASS	AB=0.596;AC=9;AF=0.161;AN=56;BaseQRankSum=11.177;DP=727;FS=18.969;HRun=0;HaplotypeScore=620.8150;InbreedingCoeff=0.8500;MQ=87.08;MQ0=0;MQRankSum=-6.728;QD=67.92;ReadPosRankSum=1.530;VQSLOD=0.1842;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,14412	0/0:15,0:15:45.15:0,45,4936	0/0:29,0:29:87.30:0,87,6455	0/0:29,0:29:78.27:0,78,5363	0/0:30,0:30:87.30:0,87,11199	0/0:23,0:23:66.21:0,66,7100	0/0:27,0:27:75.24:0,75,8867	0/0:27,0:27:69.23:0,69,4870	0/0:31,0:31:84.27:0,84,9490	0/0:34,0:34:96.33:0,96,11607	0/0:27,0:27:75.26:0,75,7953	0/0:29,0:29:84.27:0,84,10396	0/0:21,0:21:57.20:0,57,6730	0/0:18,0:18:54.15:0,54,6050	0/0:30,0:30:90.31:0,90,11851	0/0:25,0:25:72.25:0,72,9904	0/0:29,0:29:81.22:0,81,9212	0/0:24,0:24:69.24:0,69,8789	1/1:10,9:19:27.09:838,27,0	1/1:4,9:13:18.06:1182,18,0	1/1:12,19:31:9.50:560,9,0	0/0:24,0:24:69.24:0,69,7918	0/0:16,0:16:42.13:0,42,5362	0/0:39,0:39:99:0,114,13037	0/0:17,0:17:45.15:0,45,4692	0/1:11,23:34:99:3530,0,579	1/1:10,17:27:26.72:2312,27,0	0/0:15,0:15:42.14:0,42,3993
chr10	94871794	.	ACACACATGAACAT	A	2168.63	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.315;DP=765;FS=2.951;HRun=0;HaplotypeScore=274.5181;InbreedingCoeff=0.9999;MQ=83.51;MQ0=0;MQRankSum=-6.931;QD=47.14;ReadPosRankSum=-2.091;VQSLOD=2.7082;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,35:45:60.21:2264,60,0	0/0:14,0:14:42.12:0,42,2548	0/0:42,0:40:98.89:0,99,4852	0/0:49,0:48:99:0,111,5375	0/0:37,0:37:99:0,102,6237	0/0:30,0:30:87.24:0,87,5126	0/0:32,0:32:96.27:0,96,5045	0/0:18,0:18:51.16:0,51,2714	0/0:25,0:25:72.14:0,72,4091	0/0:28,0:28:75.25:0,75,4372	0/0:22,0:22:60.19:0,60,3202	0/0:36,0:36:99:0,102,5666	0/0:21,0:21:60.19:0,60,3488	0/0:18,0:18:45.15:0,45,2698	0/0:31,0:31:84.28:0,84,4897	0/0:25,0:25:72.25:0,72,4258	0/0:23,0:23:63.20:0,63,3845	0/0:25,0:25:72.23:0,72,4126	0/0:23,0:23:60.20:0,60,3141	0/0:23,0:23:63.19:0,63,3689	0/0:39,0:39:99:0,111,6532	0/0:16,0:16:45.15:0,45,2673	0/0:18,0:18:51.18:0,51,3245	0/0:29,0:29:81.26:0,81,5017	0/0:19,0:19:57.20:0,57,3616	0/0:23,0:23:63.13:0,63,3671	0/0:30,0:29:90.27:0,90,5354	0/0:22,0:22:63.22:0,63,3595
chr10	94872114	.	A	AT	2687.76	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-1.520;DP=574;FS=12.186;HRun=9;HaplotypeScore=67.9440;InbreedingCoeff=0.9969;MQ=76.26;MQ0=0;MQRankSum=-0.929;QD=24.21;ReadPosRankSum=0.524;VQSLOD=3.6830;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:83.96:0,84,726	1/1:1,10:11:26.91:279,27,0	0/0:21,0:22:34.95:0,35,266	0/0:14,0:13:18.83:0,19,153	1/1:3,24:27:66.14:717,66,0	0/0:10,0:10:26.99:0,27,234	0/0:17,0:17:47.99:0,48,416	0/0:35,0:35:74.96:0,75,651	1/1:0,20:20:54.14:595,54,0	0/0:27,1:28:44.77:0,45,611	0/0:16,0:16:38.99:0,39,338	0/0:21,0:21:59.97:0,60,518	0/0:11,0:11:29.97:0,30,255	0/0:15,0:15:38.99:0,39,339	1/1:1,11:12:27.07:299,27,0	1/1:0,16:16:45.04:481,45,0	0/0:38,0:38:86.92:0,87,744	0/0:24,0:24:68.94:0,69,589	0/0:30,0:30:86.97:0,87,753	0/0:25,0:25:65.97:0,66,573	0/0:14,0:14:35.97:0,36,307	0/0:17,0:18:50.03:0,50,423	0/0:19,0:19:53.98:0,54,469	0/0:24,0:24:53.66:0,54,458	1/1:3,21:24:25.08:505,25,0	0/0:21,0:21:50.93:0,51,431	0/0:11,0:11:23.98:0,24,208	0/0:14,0:15:27.63:0,28,324
chr10	94872288	.	ATGTG	A	979.67	PASS	AB=0.906;AC=15;AF=0.288;AN=52;BaseQRankSum=1.541;DP=639;FS=2.776;HRun=0;HaplotypeScore=132.7283;InbreedingCoeff=0.4157;MQ=59.63;MQ0=12;MQRankSum=-0.317;QD=4.62;ReadPosRankSum=-0.489;VQSLOD=2.2961;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,7:38:38.65:279,0,39	0/0:9,0:10:3.01:0,3,52	0/0:35,0:19:0:0,0,0	./.	0/0:23,0:22:6.02:0,6,114	0/0:16,0:16:9.50:0,10,158	0/0:32,0:33:12.45:0,12,208	0/0:31,0:30:13.86:0,14,215	0/0:20,0:19:12.41:0,12,248	1/1:11,0:13:6.01:56,6,0	1/1:7,0:17:18:162,18,0	0/0:22,0:19:27.05:0,27,459	0/0:19,0:18:3.01:0,3,52	0/0:15,0:13:9.03:0,9,174	0/0:17,0:16:6.02:0,6,113	0/0:14,0:13:2.97:0,3,41	0/1:40,1:39:10.61:11,0,570	0/0:19,0:31:21.07:0,21,374	1/1:22,0:22:3:27,3,0	1/1:8,3:12:12.03:168,12,0	0/1:30,4:34:21.65:217,0,22	./.	0/0:17,0:17:3:0,3,52	0/0:41,0:40:5.99:0,6,89	0/0:18,0:18:3.01:0,3,53	1/1:13,3:18:12:125,12,0	1/1:12,4:16:6.02:93,6,0	0/0:7,0:9:11.78:0,12,224
chr10	94872416	.	GGTTT	G	15100.76	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=11.150;DP=641;FS=1.817;HRun=0;HaplotypeScore=111.0877;InbreedingCoeff=0.9942;MQ=66.81;MQ0=2;MQRankSum=-2.731;QD=31.20;ReadPosRankSum=4.281;VQSLOD=4.6443;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,38:43:78.27:1324,78,0	1/1:1,7:8:17.51:271,18,0	0/0:31,0:24:41.31:0,41,934	0/0:33,0:29:39.56:0,40,1111	1/1:3,22:25:56.98:864,57,0	1/1:1,13:14:30.10:507,30,0	1/1:5,18:23:33.11:560,33,0	1/1:10,12:21:36.12:578,36,0	1/1:3,19:22:39.13:662,39,0	0/0:32,0:32:78.22:0,78,1733	0/0:12,0:12:30.10:0,30,679	1/1:1,23:24:45.15:764,45,0	1/1:5,13:18:30.10:509,30,0	1/1:2,15:17:36.12:610,36,0	1/1:5,18:23:42.14:697,42,0	1/1:3,5:8:15.05:254,15,0	0/0:31,0:31:78.22:0,78,1803	0/0:18,0:18:51.15:0,51,1206	1/1:10,15:24:45.14:704,45,0	1/1:2,16:18:45.10:701,45,0	1/1:6,33:39:60.21:1017,60,0	1/1:3,12:15:35.90:510,36,0	1/1:2,12:14:29.58:478,30,0	1/1:8,31:39:66.03:1087,66,0	1/1:6,18:24:42.14:698,42,0	1/1:3,24:27:69.18:1057,69,0	1/1:4,19:23:45.15:743,45,0	1/1:2,10:12:30.10:508,30,0
chr10	94872597	.	C	CTT	2833.14	PASS	AB=0.604;AC=27;AF=0.482;AN=56;BaseQRankSum=-2.751;DP=570;FS=9.751;HRun=13;HaplotypeScore=92.6766;InbreedingCoeff=0.5832;MQ=69.33;MQ0=0;MQRankSum=1.001;QD=8.21;ReadPosRankSum=-2.364;VQSLOD=0.4227;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:46:22.54:105,0,23	0/0:4,0:4:12:0,12,106	0/0:21,0:15:14.40:0,14,99	0/0:18,0:15:4.37:0,4,69	0/0:28,0:27:56.46:0,56,494	0/1:7,0:21:10.35:68,0,10	0/1:8,1:22:17.47:129,0,17	1/1:17,8:27:30.02:354,30,0	0/0:13,0:13:23.57:0,24,211	0/0:19,0:19:26.65:0,27,231	0/0:22,0:22:38.44:0,38,320	1/1:5,0:14:7.49:26,7,0	1/1:6,0:11:23.58:112,24,0	0/1:7,0:19:29.13:37,0,29	0/0:15,0:15:38.86:0,39,342	0/0:7,0:7:21:0,21,185	0/0:33,0:37:68.27:0,68,626	0/0:13,0:16:21.99:0,22,193	1/1:14,6:34:61.29:608,61,0	1/1:10,17:27:49.12:516,49,0	1/1:6,11:19:17.53:196,18,0	0/1:5,0:16:28.40:38,0,28	1/1:5,0:13:8.73:29,9,0	1/1:8,0:20:27.28:147,27,0	0/0:21,0:21:34.79:0,35,310	1/1:19,4:27:35.62:432,36,0	1/1:9,14:22:11.99:164,12,0	1/1:0,3:5:6.02:82,6,0
chr10	94873126	.	G	GC	9508.19	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=4.024;DP=593;FS=26.852;HRun=1;HaplotypeScore=104.4272;InbreedingCoeff=0.6827;MQ=83.77;MQ0=0;MQRankSum=-6.115;QD=18.68;ReadPosRankSum=6.871;VQSLOD=3.4594;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:42:85.78:553,86,0	1/1:0,18:18:45.15:673,45,0	0/0:26,0:26:61.92:0,62,756	0/0:16,0:16:31.11:0,31,383	1/1:0,19:19:48.16:709,48,0	0/1:18,0:18:20.29:151,0,20	0/1:22,0:22:0.19:202,0,0	1/1:25,0:24:9.85:279,10,0	1/1:0,29:29:78.26:1166,78,0	1/1:23,0:23:7.70:214,8,0	1/1:16,0:16:20.59:195,21,0	1/1:20,0:20:22.78:239,23,0	1/1:26,0:26:56.47:314,56,0	1/1:13,0:13:34.20:187,34,0	1/1:1,18:19:51.17:762,51,0	1/1:0,18:18:51.17:764,51,0	0/0:23,0:23:66.20:0,66,842	0/0:19,0:19:54.15:0,54,684	1/1:28,0:28:39.08:394,39,0	1/1:15,0:15:15.77:196,16,0	1/1:18,0:17:23.31:207,23,0	1/1:32,0:32:57.71:389,58,0	1/1:19,0:19:45.85:262,46,0	1/1:12,0:12:19.84:170,20,0	1/1:0,16:16:48.16:717,48,0	0/1:23,0:23:12.11:219,0,12	1/1:26,0:26:17.26:341,17,0	1/1:12,0:12:34.83:208,35,0
chr10	94873127	.	C	CG	15336.42	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-0.453;DP=610;FS=17.105;HRun=5;HaplotypeScore=89.7040;InbreedingCoeff=0.9967;MQ=85.70;MQ0=0;MQRankSum=-6.317;QD=29.44;ReadPosRankSum=3.160;VQSLOD=3.4208;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,41:43:99:1460,111,0	1/1:18,0:18:44.75:345,45,0	0/0:29,0:29:60.14:0,60,637	0/0:17,0:17:16.96:0,17,236	1/1:18,0:18:47.67:366,48,0	1/1:5,16:21:36.12:474,36,0	1/1:3,18:21:54.18:711,54,0	1/1:3,23:25:69.19:877,69,0	1/1:30,0:30:77.35:574,77,0	1/1:5,19:24:60.12:753,60,0	1/1:2,16:18:39.13:513,39,0	1/1:3,16:19:54.15:685,54,0	1/1:0,25:25:60.03:789,60,0	1/1:2,12:14:36.12:474,36,0	1/1:19,0:19:29.36:355,29,0	1/1:18,0:18:50.27:336,50,0	0/0:23,0:23:66.13:0,66,691	0/0:20,0:20:51.12:0,51,548	1/1:2,27:29:81.26:1059,81,0	1/1:1,15:16:39.13:509,39,0	1/1:2,16:17:42.14:552,42,0	1/1:2,31:33:75.24:985,75,0	1/1:1,17:18:48.02:630,48,0	1/1:1,12:13:33.11:434,33,0	1/1:16,0:16:47.41:335,47,0	1/1:3,22:25:63.14:780,63,0	1/1:3,23:26:66.21:868,66,0	1/1:1,12:13:36.12:474,36,0
chr10	94873565	.	A	AAAAAT	18903.86	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-6.731;DP=409;FS=0.000;HRun=0;HaplotypeScore=64.2722;InbreedingCoeff=0.9165;MQ=72.31;MQ0=1;MQRankSum=-6.939;QD=55.76;ReadPosRankSum=2.090;VQSLOD=5.1791;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:19:42.14:1198,42,0	1/1:0,4:5:6.02:177,6,0	0/0:15,0:14:24.06:0,24,313	0/0:16,0:12:22.84:0,23,320	1/1:3,10:15:21.07:523,21,0	1/1:1,8:12:21.07:618,21,0	1/1:1,9:12:21.07:617,21,0	1/1:2,22:28:81.24:1953,81,0	1/1:1,5:7:9.03:265,9,0	1/1:2,13:16:39.13:1048,39,0	1/1:2,17:21:45.15:1298,45,0	1/1:0,8:11:21.07:602,21,0	1/1:4,8:13:15.05:442,15,0	1/1:0,6:6:15.05:441,15,0	1/1:1,11:12:33.11:973,33,0	1/1:0,14:15:30.10:885,30,0	0/0:26,0:26:60.13:0,60,1068	0/0:13,0:13:36.12:0,36,657	1/1:2,15:22:63.20:1397,63,0	1/1:2,15:22:45.08:1135,45,0	1/1:1,4:5:9.03:228,9,0	1/1:4,3:8:11.94:219,12,0	1/1:1,10:12:20.94:618,21,0	1/1:1,10:12:24.08:707,24,0	1/1:0,13:15:27.09:796,27,0	1/1:1,13:17:42.14:1104,42,0	1/1:7,15:24:36.12:1040,36,0	1/1:0,8:9:21.07:618,21,0
chr10	94874306	.	A	AT	14777.27	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-9.511;DP=529;FS=13.873;HRun=6;HaplotypeScore=49.2183;InbreedingCoeff=0.9902;MQ=73.93;MQ0=0;MQRankSum=-1.772;QD=33.43;ReadPosRankSum=0.969;VQSLOD=3.6510;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:26:60.17:739,60,0	1/1:1,7:8:21.07:264,21,0	0/0:14,0:14:27.06:0,27,275	0/0:10,0:10:20.91:0,21,194	1/1:5,37:42:99:1439,117,0	1/1:0,23:23:69.22:868,69,0	1/1:2,13:15:39.12:491,39,0	1/1:3,22:25:66.21:827,66,0	1/1:3,17:20:57.18:715,57,0	1/1:1,22:23:66.21:830,66,0	1/1:5,22:27:57.14:699,57,0	1/1:3,11:14:33.11:413,33,0	1/1:3,15:18:48.14:588,48,0	1/1:0,7:7:21.07:264,21,0	1/1:1,14:15:45.14:555,45,0	1/1:1,4:5:15.05:187,15,0	0/0:42,0:42:99:0,114,1163	0/0:21,0:21:57.12:0,57,581	1/1:3,13:16:45.09:532,45,0	1/1:1,16:17:48.15:604,48,0	1/1:3,8:11:27.08:328,27,0	1/1:0,11:11:33.11:415,33,0	1/1:1,17:18:54.17:673,54,0	1/1:1,10:11:30.10:377,30,0	1/1:2,21:22:63.19:780,63,0	1/1:1,27:28:81.26:1017,81,0	1/1:3,28:31:72.23:906,72,0	1/1:1,7:8:21.07:264,21,0
chr10	94874379	.	GA	G	2128.24	PASS	AB=0.879;AC=14;AF=0.250;AN=56;BaseQRankSum=8.203;DP=536;FS=2.513;HRun=10;HaplotypeScore=72.7650;InbreedingCoeff=0.8238;MQ=73.73;MQ0=0;MQRankSum=-1.843;QD=16.00;ReadPosRankSum=1.171;VQSLOD=4.2060;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:27:43.12:0,43,696	1/1:3,6:9:17.46:155,17,0	0/1:10,2:12:26.52:27,0,160	0/0:9,0:9:15.74:0,16,133	1/1:10,30:40:83.95:729,84,0	0/0:24,0:24:57.15:0,57,631	0/0:12,0:12:33.07:0,33,351	0/0:25,1:26:34.06:0,34,591	1/1:3,16:19:50.97:439,51,0	0/0:19,0:19:45.10:0,45,487	0/0:19,0:19:48.12:0,48,524	0/0:9,0:9:24.06:0,24,265	0/1:8,1:9:5:5,0,178	0/0:12,0:12:27.07:0,27,299	1/1:1,18:19:47.99:416,48,0	1/1:2,6:8:17.99:156,18,0	0/0:48,0:48:99:0,117,1273	0/0:24,0:24:60.16:0,60,663	0/0:25,0:26:72.03:0,72,776	0/0:17,0:18:39.07:0,39,406	0/0:10,0:10:30.08:0,30,330	0/0:18,1:19:25.03:0,25,483	0/0:13,0:14:32.92:0,33,346	0/0:16,0:18:47.73:0,48,468	1/1:1,16:17:44.99:391,45,0	0/0:28,0:28:63.14:0,63,670	0/0:27,1:29:42.78:0,43,656	0/0:11,0:11:30.07:0,30,323
chr10	94875064	.	GCACACACACACACACACACACACACACACA	G	1674.80	PASS	AB=0.659;AC=15;AF=0.278;AN=54;BaseQRankSum=4.711;DP=492;FS=3.611;HRun=0;HaplotypeScore=279.9997;InbreedingCoeff=0.6953;MQ=52.72;MQ0=22;MQRankSum=-5.013;QD=12.14;ReadPosRankSum=-0.920;VQSLOD=1.9371;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,14:26:75.69:436,0,76	0/0:4,0:5:9.02:0,9,422	0/0:34,0:19:27.09:0,27,2192	0/0:40,0:23:27.08:0,27,1822	0/0:19,0:27:21.07:0,21,1525	1/1:6,7:13:15.48:371,15,0	1/1:8,0:8:3:25,3,0	0/0:21,0:19:42.13:0,42,2334	0/0:7,0:12:13.51:0,14,1086	0/0:17,0:16:39.10:0,39,2682	0/0:15,0:16:42.14:0,42,4760	1/1:11,8:19:11.87:477,12,0	1/1:9,4:13:3.01:232,3,0	1/1:11,4:15:3.01:90,3,0	0/0:8,0:10:15.05:0,15,1490	0/0:14,0:16:18.06:0,18,1683	0/0:24,0:22:57.20:0,57,6504	0/0:19,0:18:42.14:0,42,4250	0/0:8,0:7:9.02:0,9,364	0/0:10,0:10:18.06:0,18,1645	0/0:28,0:25:24.04:0,24,1814	1/1:11,9:20:3.01:76,3,0	./.	1/1:19,3:19:4.56:131,5,0	0/0:9,0:15:10.75:0,11,1053	0/0:12,0:11:30.03:0,30,2745	0/0:13,0:14:18.53:0,19,1739	0/0:6,0:9:21.07:0,21,2285
chr10	94875113	.	G	GGGGAGA	2665.01	PASS	AB=0.864;AC=42;AF=0.840;AN=50;BaseQRankSum=1.090;DP=420;FS=0.000;HRun=0;HaplotypeScore=128.0771;InbreedingCoeff=0.0807;MQ=34.90;MQ0=58;MQRankSum=-4.607;QD=7.36;ReadPosRankSum=-4.450;VQSLOD=0.8750;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:21:21.18:45,0,21	0/1:3,0:3:12.08:12,0,32	./.	./.	1/1:16,0:15:2.68:11,3,0	0/1:15,0:14:2.54:63,0,3	1/1:17,1:17:30.50:270,31,0	1/1:25,0:22:49.18:440,49,0	1/1:11,0:11:21.53:152,22,0	1/1:17,0:16:11.85:163,12,0	1/1:14,0:14:2.55:35,3,0	1/1:19,0:20:22.05:251,22,0	1/1:6,0:7:10.62:111,11,0	1/1:11,0:11:8.70:107,9,0	1/1:9,0:9:9.81:91,10,0	0/1:8,10:17:10.27:176,0,10	0/0:22,0:19:43.67:0,44,416	0/1:17,0:12:11.08:11,0,135	1/1:13,0:11:26.40:204,26,0	1/1:8,0:8:5.74:38,6,0	1/1:19,0:15:13.16:93,13,0	1/1:11,0:11:0.89:2,1,0	./.	1/1:19,0:20:2.84:49,3,0	1/1:16,0:15:11.65:86,12,0	1/1:15,0:13:18.84:215,19,0	0/1:6,9:17:32.29:130,0,32	1/1:9,0:8:5.83:43,6,0
chr10	94875690	.	AT	A	1806.54	PASS	AB=0.923;AC=13;AF=0.232;AN=56;BaseQRankSum=0.596;DP=507;FS=0.000;HRun=10;HaplotypeScore=145.7002;InbreedingCoeff=0.9010;MQ=68.45;MQ0=0;MQRankSum=-3.904;QD=15.05;ReadPosRankSum=0.919;VQSLOD=2.4288;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,1:24:5.77:0,6,172	1/1:1,11:12:29.98:260,30,0	0/1:11,1:11:2.20:2,0,182	0/0:15,0:15:35.63:0,36,374	1/1:3,29:32:53.91:472,54,0	0/0:6,0:16:39.85:0,40,220	0/0:5,0:21:51.66:0,52,283	0/0:24,0:24:57.10:0,57,608	1/1:2,11:13:21.44:272,21,0	0/0:17,0:18:38.92:0,39,413	0/0:19,0:19:39.01:0,39,408	0/0:4,0:15:30.85:0,31,164	0/0:2,0:12:25.80:0,26,120	0/0:1,0:7:14.33:0,14,76	1/1:6,18:24:53.99:473,54,0	1/1:4,9:13:29.93:252,30,0	0/0:19,0:19:10.48:0,10,79	0/0:10,0:11:23.90:0,24,246	0/0:18,0:18:36.09:0,36,390	0/0:27,0:27:55.10:0,55,640	0/0:15,0:15:29.86:0,30,299	0/0:6,0:15:34.37:0,34,186	0/0:8,0:25:61.54:0,62,344	0/0:4,0:12:18.66:0,19,89	1/1:3,11:14:29.99:260,30,0	0/0:25,0:25:57.15:0,57,630	0/0:29,0:29:43.07:0,43,443	0/0:20,0:20:30.05:0,30,320
chr10	94875717	.	CTGTGTGGTGTTGTGTGTGTGTGTGTGTG	C	2449.56	PASS	AB=0.951;AC=21;AF=0.389;AN=54;BaseQRankSum=-4.991;DP=479;FS=2.397;HRun=0;HaplotypeScore=300.4266;InbreedingCoeff=-0.0425;MQ=56.93;MQ0=23;MQRankSum=2.534;QD=9.11;ReadPosRankSum=-0.835;VQSLOD=1.6881;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:5.04:0,5,260	1/1:6,2:8:6.02:260,6,0	0/1:36,0:12:8.07:8,0,687	0/0:37,0:16:23.98:0,24,609	1/1:14,7:24:6.02:99,6,0	0/1:13,0:13:97.21:97,0,352	0/1:16,0:15:99:161,0,215	0/1:21,0:21:99:189,0,1364	1/1:6,3:8:9.03:314,9,0	0/1:2,0:15:99:239,0,231	0/0:5,0:13:0.47:0,0,1	0/0:16,0:16:5.08:0,5,1193	0/0:7,0:7:2.44:0,2,780	0/0:8,0:8:1.34:0,1,2	1/1:8,6:16:9.02:148,9,0	1/1:7,3:10:8.99:456,9,0	0/0:16,0:16:6.38:0,6,340	0/1:11,0:9:62.91:63,0,1127	0/1:12,0:13:99:172,0,762	0/0:24,0:25:0.47:0,0,2	0/1:14,0:14:41.45:41,0,182	0/0:12,0:12:0.89:0,1,2	0/1:24,0:24:10.95:75,0,11	0/1:15,0:15:71.61:72,0,143	./.	0/1:24,0:24:99:210,0,1507	0/0:21,0:21:9.97:0,10,185	0/0:21,0:21:20.37:0,20,1684
chr10	94875719	.	GTGTGGTGT	G	5524.05	PASS	AB=0.992;AC=39;AF=0.722;AN=54;BaseQRankSum=-2.503;DP=473;FS=4.767;HRun=0;HaplotypeScore=167.3702;InbreedingCoeff=0.2125;MQ=55.09;MQ0=25;MQRankSum=-0.256;QD=14.85;ReadPosRankSum=1.757;VQSLOD=3.8672;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:1.53:5,2,0	1/1:8,0:8:6.02:109,6,0	0/1:36,0:12:11.30:11,0,370	0/0:37,0:15:21.39:0,21,301	1/1:23,0:23:6.02:99,6,0	1/1:13,0:13:10.85:176,11,0	1/1:18,0:17:21.07:414,21,0	1/1:22,0:21:43.52:571,44,0	1/1:8,0:7:9.03:159,9,0	1/1:14,1:15:36.11:721,36,0	0/0:11,1:12:0.47:0,0,1	1/1:15,0:16:29.56:379,30,0	1/1:7,0:7:16.75:199,17,0	0/0:8,0:8:0.51:0,1,1	1/1:15,0:15:9.02:148,9,0	1/1:8,0:8:8.99:144,9,0	1/1:16,0:16:0.54:1,1,0	0/1:11,0:9:50.79:166,0,51	0/1:13,0:13:52.49:548,0,52	0/0:21,1:22:0.47:0,0,1	1/1:13,1:13:6.02:110,6,0	0/0:15,0:15:0.47:0,0,1	0/1:23,0:24:9.43:76,0,9	1/1:15,0:15:8.50:143,9,0	./.	1/1:6,17:23:56.91:1129,57,0	1/1:4,14:18:4.47:139,4,0	0/1:22,0:22:75.95:76,0,77
chr10	94875721	.	GTGGTGT	G	5935.36	PASS	AB=0.904;AC=41;AF=0.759;AN=54;BaseQRankSum=-1.950;DP=459;FS=5.191;HRun=0;HaplotypeScore=153.5236;InbreedingCoeff=0.2357;MQ=52.24;MQ0=28;MQRankSum=-0.790;QD=15.96;ReadPosRankSum=2.136;VQSLOD=3.7670;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:1.89:29,2,0	1/1:7,0:7:6.02:109,6,0	0/1:35,0:11:11.30:11,0,368	0/0:36,0:13:21.39:0,21,301	1/1:23,0:23:6.02:99,6,0	1/1:13,0:13:12.04:200,12,0	1/1:18,0:17:21.07:414,21,0	1/1:20,0:19:48.09:730,48,0	1/1:8,0:7:9.03:145,9,0	1/1:15,0:15:36.11:680,36,0	0/1:10,0:10:0:0,0,0	1/1:15,0:15:30.09:476,30,0	1/1:7,0:7:18.03:282,18,0	0/0:8,0:8:0.22:0,0,1	1/1:15,0:15:9.02:148,9,0	1/1:7,0:7:8.99:116,9,0	1/1:16,0:16:2.50:19,2,0	1/1:11,0:9:10.69:209,11,0	0/1:3,10:13:42.98:559,0,43	0/0:4,17:20:0:0,0,0	1/1:13,1:12:6.02:110,6,0	0/0:14,1:15:0:0,0,0	0/1:22,1:23:9.53:76,0,10	1/1:14,0:14:8.82:143,9,0	./.	1/1:21,1:22:56.98:1101,57,0	1/1:16,1:17:5.06:120,5,0	0/1:22,0:22:5.12:159,0,5
chr10	94875722	.	TG	T	2791.62	PASS	AB=0.901;AC=43;AF=0.860;AN=50;BaseQRankSum=1.862;DP=455;FS=3.736;HRun=2;HaplotypeScore=147.4851;InbreedingCoeff=0.2620;MQ=49.45;MQ0=28;MQRankSum=-0.711;QD=7.19;ReadPosRankSum=2.582;VQSLOD=1.2290;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,8:26:2.47:37,2,0	1/1:7,0:7:5.79:36,6,0	0/1:33,1:10:8.08:8,0,292	0/0:34,0:12:20.54:0,21,244	1/1:23,0:23:6.01:65,6,0	1/1:9,4:13:12:118,12,0	1/1:16,2:16:20.67:150,21,0	1/1:15,5:19:47.39:461,47,0	1/1:7,1:7:8.49:69,8,0	1/1:15,0:15:34.91:256,35,0	./.	1/1:12,3:15:29.82:265,30,0	1/1:3,4:7:18.02:176,18,0	0/1:6,2:8:0.18:0,0,0	1/1:15,0:15:8.99:77,9,0	1/1:7,0:7:7.96:37,8,0	1/1:15,1:16:2.43:25,2,0	1/1:11,0:9:21.01:211,21,0	0/1:14,0:13:8.41:185,0,8	0/1:21,0:20:0:0,0,0	1/1:13,1:12:5.03:40,5,0	./.	0/1:14,8:22:7.60:53,0,8	1/1:10,4:14:9.45:79,9,0	./.	1/1:22,0:22:50.41:314,50,0	1/1:16,0:16:5.33:44,5,0	1/1:17,5:22:21.42:205,21,0
chr10	94875723	.	GGTGT	G	6280.97	PASS	AB=0.876;AC=42;AF=0.778;AN=54;BaseQRankSum=-0.709;DP=451;FS=5.712;HRun=0;HaplotypeScore=143.0503;InbreedingCoeff=0.2879;MQ=49.26;MQ0=29;MQRankSum=-1.445;QD=17.26;ReadPosRankSum=1.969;VQSLOD=4.4665;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,13:25:2.40:53,2,0	1/1:2,4:6:6.02:109,6,0	0/1:34,0:10:11.30:11,0,367	0/0:35,0:12:20.92:0,21,300	1/1:11,10:23:6.02:99,6,0	1/1:4,8:13:12.04:224,12,0	1/1:4,12:15:21.07:414,21,0	1/1:6,12:18:48.16:853,48,0	1/1:5,3:7:9.03:131,9,0	1/1:14,1:15:36.11:640,36,0	0/0:9,0:9:0:0,0,0	1/1:7,4:15:30.09:560,30,0	1/1:5,1:8:17.73:355,18,0	0/1:5,2:9:0.32:0,0,1	1/1:9,4:14:9.02:148,9,0	1/1:3,4:7:8.98:88,9,0	1/1:1,14:16:2.56:37,3,0	1/1:6,2:9:20.98:302,21,0	0/1:14,0:13:29.83:509,0,30	0/0:20,0:20:0:0,0,0	1/1:9,5:12:6.02:110,6,0	0/0:5,10:15:0:0,0,0	0/1:10,10:22:9.20:76,0,9	1/1:5,7:14:8.64:144,9,0	./.	1/1:19,1:20:56.93:988,57,0	1/1:15,1:16:5.95:121,6,0	1/1:5,14:22:23.96:309,24,0
chr10	94875726	.	GT	G	2361.59	PASS	AB=0.839;AC=42;AF=0.778;AN=54;BaseQRankSum=2.040;DP=446;FS=2.369;HRun=2;HaplotypeScore=144.4147;InbreedingCoeff=0.4216;MQ=45.85;MQ0=36;MQRankSum=-0.441;QD=6.79;ReadPosRankSum=3.767;VQSLOD=1.1538;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,11:25:2.34:37,2,0	1/1:6,0:6:5.58:32,6,0	0/0:33,0:9:27.03:0,27,300	0/0:34,0:11:17.60:0,18,184	1/1:21,1:22:3:28,3,0	1/1:9,5:13:11.50:100,11,0	1/1:15,2:15:20.53:148,21,0	1/1:13,6:18:41.61:391,42,0	1/1:7,0:6:5.21:30,5,0	1/1:15,0:15:31:203,31,0	0/0:9,0:9:0:0,0,0	1/1:8,6:14:26.87:253,27,0	1/1:2,6:8:18.02:176,18,0	0/1:4,4:8:0.18:0,0,1	1/1:12,1:13:5.99:52,6,0	1/1:7,0:7:4.44:14,4,0	1/1:14,2:16:2.43:25,2,0	1/1:9,4:9:21.01:211,21,0	0/1:13,0:12:8.30:140,0,8	0/1:20,1:20:0:0,0,0	1/1:15,1:10:4.90:39,5,0	0/0:11,4:15:0:0,0,0	0/1:14,8:21:3.94:4,0,17	1/1:7,6:13:6.48:60,6,0	./.	1/1:20,0:20:49.88:282,50,0	1/1:16,0:16:4.86:44,5,0	1/1:16,7:22:22.29:224,22,0
chr10	94876369	.	CG	C	4277.36	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.684;DP=688;FS=2.205;HRun=2;HaplotypeScore=88.6905;InbreedingCoeff=0.9999;MQ=82.51;MQ0=0;MQRankSum=-0.364;QD=35.64;ReadPosRankSum=2.070;VQSLOD=5.3957;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,153,2245	1/1:0,10:10:30.10:389,30,0	0/0:32,0:32:84.95:0,85,1141	0/0:26,0:25:62.46:0,62,889	1/1:1,14:15:45.14:578,45,0	0/0:20,0:20:60.20:0,60,892	0/0:32,0:32:96.33:0,96,1435	0/0:29,0:29:84.26:0,84,1205	1/1:0,26:26:72.23:934,72,0	0/0:16,0:16:48.14:0,48,695	0/0:14,0:14:42.13:0,42,607	0/0:33,0:33:96.31:0,96,1418	0/0:34,0:34:99:0,102,1485	0/0:20,0:20:60.20:0,60,896	1/1:0,21:21:60.20:779,60,0	1/1:1,28:29:72.23:935,72,0	0/0:31,0:31:93.32:0,93,1393	0/0:23,0:23:69.23:0,69,1030	0/0:20,0:20:57.19:0,57,847	0/0:20,0:20:57.18:0,57,834	0/0:43,0:43:99:0,123,1820	0/0:20,0:20:60.19:0,60,879	0/0:19,0:19:54.10:0,54,759	0/0:26,0:26:78.21:0,78,1121	1/1:0,19:19:51.17:662,51,0	0/0:24,0:24:72.24:0,72,1078	0/0:20,0:20:57.16:0,57,811	0/0:13,0:13:39.13:0,39,584
chr10	94876513	.	GAC	G	15643.67	PASS	AB=0.915;AC=51;AF=0.911;AN=56;BaseQRankSum=5.612;DP=797;FS=14.001;HRun=0;HaplotypeScore=108.3090;InbreedingCoeff=0.3797;MQ=66.31;MQ0=7;MQRankSum=0.040;QD=20.64;ReadPosRankSum=2.313;VQSLOD=4.3505;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,38:51:98.73:1157,99,0	1/1:3,4:8:17.47:167,17,0	0/1:52,1:23:9.08:9,0,236	0/0:39,0:20:30.57:0,31,452	1/1:3,21:26:62.85:703,63,0	1/1:7,20:29:56.84:636,57,0	1/1:15,19:35:50.99:586,51,0	1/1:7,20:27:51.15:608,51,0	1/1:5,26:31:78.07:908,78,0	1/1:6,29:37:89.77:1008,90,0	1/1:3,18:25:65.70:721,66,0	1/1:7,27:34:78.20:912,78,0	1/1:2,21:26:68.71:757,69,0	1/1:8,21:31:60.02:694,60,0	1/1:6,26:32:72.22:858,72,0	1/1:7,15:22:39.12:465,39,0	0/1:19,4:23:47.11:47,0,728	0/1:19,2:21:17.32:17,0,710	1/1:13,11:26:41.76:442,42,0	1/1:6,18:25:50.99:586,51,0	1/1:11,27:40:33.14:839,33,0	1/1:9,17:28:41.96:479,42,0	1/1:4,17:21:48.15:572,48,0	1/1:7,21:28:51.15:608,51,0	1/1:6,18:26:56.84:636,57,0	1/1:1,14:16:41.96:479,42,0	1/1:6,19:26:47.88:534,48,0	1/1:3,7:10:18:215,18,0
chr10	94877923	.	GTC	G	10944.90	PASS	AB=0.903;AC=50;AF=0.893;AN=56;BaseQRankSum=1.508;DP=624;FS=2.392;HRun=0;HaplotypeScore=83.9407;InbreedingCoeff=0.6419;MQ=71.90;MQ0=10;MQRankSum=0.961;QD=19.79;ReadPosRankSum=2.301;VQSLOD=4.6949;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:48.06:546,48,0	1/1:2,6:8:12.04:145,12,0	0/0:35,0:19:18.01:0,18,217	0/0:35,1:21:28.04:0,28,432	1/1:11,15:28:48.05:494,48,0	1/1:2,18:21:44.72:465,45,0	1/1:5,17:22:35.38:408,35,0	1/1:20,25:47:76.92:864,77,0	1/1:7,27:33:42.10:507,42,0	1/1:6,20:26:54.14:633,54,0	1/1:2,14:17:41.96:485,42,0	1/1:5,14:18:42.09:490,42,0	1/1:3,16:20:32.92:359,33,0	1/1:4,14:18:30.09:362,30,0	1/1:0,11:12:23.91:267,24,0	1/1:3,18:21:36.11:434,36,0	0/1:10,1:11:6.10:6,0,399	0/1:7,1:8:18.17:18,0,194	1/1:7,8:15:9.61:186,10,0	1/1:2,23:24:60.05:669,60,0	1/1:2,23:24:24.19:519,24,0	1/1:2,19:23:47.90:538,48,0	1/1:2,8:10:12.04:145,12,0	1/1:5,23:28:47.98:557,48,0	1/1:1,17:18:26.91:303,27,0	1/1:2,16:18:46.74:521,47,0	1/1:7,27:34:62.85:736,63,0	1/1:2,11:12:24.07:288,24,0
chr10	94878364	.	C	CCT	327.19	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=-1.230;DP=319;FS=8.027;HRun=0;HaplotypeScore=70.3268;InbreedingCoeff=0.8023;MQ=86.28;MQ0=0;MQRankSum=1.166;QD=7.27;ReadPosRankSum=0.834;VQSLOD=2.3309;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:32.47:0,32,258	./.	0/0:21,0:21:8.40:0,8,275	0/0:19,0:18:37.69:0,38,398	1/1:9,0:9:8.91:85,9,0	0/0:11,0:11:30.26:0,30,246	0/0:15,0:15:35.99:0,36,383	0/0:17,0:17:44.29:0,44,382	1/1:1,5:6:3.01:47,3,0	0/0:9,0:9:17.06:0,17,149	0/0:11,0:11:20.97:0,21,178	0/0:6,0:6:10.71:0,11,79	0/0:7,0:7:17.96:0,18,167	0/0:6,0:6:15.02:0,15,152	1/1:8,0:8:18.03:223,18,0	1/1:6,1:7:8.89:72,9,0	0/0:17,0:17:37.08:0,37,336	0/0:7,0:7:15.27:0,15,126	0/0:17,0:17:50.73:0,51,443	0/0:17,0:17:32.97:0,33,290	0/0:6,0:6:11.90:0,12,93	0/0:6,0:6:9.89:0,10,83	0/0:5,0:5:6:0,6,52	0/0:11,0:11:27.03:0,27,277	1/1:6,9:15:3.01:46,3,0	0/0:16,0:16:45.82:0,46,396	0/0:18,0:18:42.04:0,42,391	0/0:11,0:11:23.70:0,24,188
chr10	94878365	.	C	CT	184.75	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=0.202;DP=315;FS=11.605;HRun=0;HaplotypeScore=60.0240;InbreedingCoeff=0.8084;MQ=85.45;MQ0=0;MQRankSum=-0.671;QD=4.40;ReadPosRankSum=1.067;VQSLOD=1.9077;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:32.45:0,32,253	./.	0/0:21,0:21:30.64:0,31,286	0/0:19,0:18:38.12:0,38,367	1/1:1,7:8:8.89:60,9,0	0/0:11,0:11:29.71:0,30,235	0/0:15,0:15:35.99:0,36,366	0/0:17,0:17:45.44:0,45,391	1/1:6,0:6:2.73:27,3,0	0/0:9,0:9:20.93:0,21,177	0/0:11,0:11:20.96:0,21,173	0/0:6,0:6:11.87:0,12,92	0/0:7,0:7:17.96:0,18,163	0/0:6,0:6:15.02:0,15,148	1/1:7,0:7:17.99:173,18,0	1/1:7,0:7:7.14:40,7,0	0/0:17,0:17:38.92:0,39,346	0/0:8,0:8:13.20:0,13,110	0/0:17,0:17:50.42:0,50,378	0/0:17,0:17:32.75:0,33,236	0/0:6,0:6:11.84:0,12,80	0/0:6,0:6:9.88:0,10,78	0/0:5,0:5:6:0,6,52	0/0:11,0:11:27.02:0,27,264	1/1:13,1:14:3.01:30,3,0	0/0:16,0:16:47.59:0,48,342	0/0:18,0:18:41.68:0,42,302	0/0:9,0:9:23.96:0,24,195
chr10	94878641	.	T	TGATAGATA	6058.10	PASS	AB=0.875;AC=40;AF=0.769;AN=52;BaseQRankSum=1.326;DP=557;FS=6.234;HRun=0;HaplotypeScore=146.8472;InbreedingCoeff=0.6290;MQ=67.52;MQ0=3;MQRankSum=-0.752;QD=14.96;ReadPosRankSum=-0.480;VQSLOD=3.3027;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:39:11.51:0,12,1077	1/1:1,0:1:3.01:35,3,0	./.	./.	1/1:17,0:17:15.02:155,15,0	0/0:22,0:21:30.10:0,30,734	0/0:15,0:25:24.31:0,24,374	0/1:34,0:32:0:0,0,0	1/1:18,0:23:18.06:469,18,0	0/0:26,0:26:44.81:0,45,988	0/0:13,0:13:12.04:0,12,295	1/1:12,1:17:9.03:329,9,0	1/1:8,0:21:26.94:219,27,0	1/1:11,1:17:3.01:121,3,0	1/1:22,0:22:27.09:409,27,0	1/1:17,0:17:12.04:150,12,0	1/1:15,0:21:24.07:647,24,0	1/1:11,4:17:9.03:300,9,0	1/1:20,0:26:18.06:523,18,0	1/1:12,2:14:2.81:121,3,0	1/1:21,4:28:6.02:228,6,0	1/1:9,0:9:3.01:52,3,0	1/1:9,0:12:8.98:73,9,0	0/1:12,0:17:36.74:37,0,86	1/1:18,0:18:30.09:364,30,0	1/1:15,8:26:33.09:1199,33,0	1/1:22,8:38:15.05:604,15,0	1/1:7,0:8:2.99:24,3,0
chr10	94878690	.	G	GAT	1506.54	PASS	AB=0.924;AC=17;AF=0.304;AN=56;BaseQRankSum=12.015;DP=493;FS=3.279;HRun=0;HaplotypeScore=103.0070;InbreedingCoeff=-0.4483;MQ=65.83;MQ0=8;MQRankSum=-3.082;QD=5.56;ReadPosRankSum=-0.558;VQSLOD=2.6581;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:44.06:0,44,1336	0/1:1,1:2:16.72:32,0,17	0/0:15,0:10:27.09:0,27,393	0/0:20,0:13:36.11:0,36,508	0/1:17,5:22:99:120,0,189	0/0:20,0:20:57.19:0,57,870	0/0:19,0:19:54.12:0,54,639	0/0:32,0:31:82.46:0,82,1246	0/1:19,1:20:93.85:94,0,161	0/0:21,0:21:57.17:0,57,832	0/0:8,0:8:18.06:0,18,274	0/1:12,0:13:73.80:74,0,241	0/1:21,0:21:84.28:84,0,312	0/0:16,0:16:14.07:0,14,395	0/1:17,6:23:99:288,0,205	0/1:12,3:15:90.37:90,0,146	0/1:18,0:18:99:111,0,288	0/1:17,0:17:30.29:30,0,304	0/0:23,0:22:48.37:0,48,763	0/1:10,0:10:26.81:27,0,37	0/1:13,0:13:15.57:16,0,122	0/1:11,0:11:46.65:47,0,228	0/1:9,0:8:24.07:24,0,140	0/0:13,0:13:0.03:0,0,333	0/1:13,8:20:94.69:304,0,95	0/1:23,0:23:92.19:92,0,452	0/1:31,0:31:99:222,0,275	0/1:2,0:2:9.02:9,0,40
chr10	94878692	.	G	GAT	635.01	PASS	AB=0.791;AC=6;AF=0.107;AN=56;BaseQRankSum=6.150;DP=471;FS=5.521;HRun=0;HaplotypeScore=94.0646;InbreedingCoeff=-0.1115;MQ=67.25;MQ0=6;MQRankSum=1.046;QD=6.68;ReadPosRankSum=-0.442;VQSLOD=2.6492;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.30:0,90,1321	0/1:1,1:2:10.95:31,0,11	0/0:15,0:10:27.09:0,27,389	0/0:20,0:13:35.24:0,35,447	0/1:15,6:21:92.28:92,0,149	0/0:20,0:20:57.18:0,57,820	0/0:20,0:20:60.17:0,60,829	0/0:32,0:31:90.26:0,90,1268	0/1:14,0:15:9.05:9,0,147	0/0:21,0:21:60.17:0,60,812	0/0:8,0:8:18.06:0,18,264	0/0:11,0:11:22.90:0,23,278	0/0:21,0:21:48.67:0,49,437	0/0:15,0:15:28.91:0,29,402	0/1:17,5:22:99:223,0,153	0/1:12,3:15:89.10:115,0,89	0/0:18,0:18:17.11:0,17,340	0/0:14,0:14:28.48:0,28,342	0/0:22,0:22:63.13:0,63,799	0/0:10,0:10:11.01:0,11,94	0/0:13,0:13:11.25:0,11,139	0/0:9,0:9:2.51:0,3,227	0/0:9,0:9:20.42:0,20,196	0/0:14,0:14:32.67:0,33,402	0/1:12,8:19:74.33:287,0,74	0/0:23,0:23:61.77:0,62,633	0/0:25,0:25:25.19:0,25,351	0/0:2,0:2:5.81:0,6,57
chr10	94878853	.	G	GT	533.54	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.437;DP=390;FS=17.446;HRun=9;HaplotypeScore=44.4378;InbreedingCoeff=0.7817;MQ=62.01;MQ0=2;MQRankSum=-1.850;QD=21.34;ReadPosRankSum=0.810;VQSLOD=2.2991;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,20:25:57.15:628,57,0	0/0:6,0:6:5.99:0,6,52	0/0:12,0:6:8.99:0,9,78	0/0:10,0:10:26.54:0,27,205	0/0:15,0:15:32.96:0,33,283	0/0:10,0:10:26.99:0,27,234	0/0:18,0:18:47.98:0,48,416	0/0:25,0:25:45.44:0,45,391	0/0:7,0:7:18:0,18,156	0/0:16,0:17:50.01:0,50,418	0/0:8,0:8:21:0,21,182	0/0:6,0:6:14.98:0,15,126	0/0:9,0:9:23.99:0,24,208	0/0:8,0:9:23:0,23,183	0/0:10,0:10:20.99:0,21,182	0/0:9,0:9:23.99:0,24,208	0/0:21,0:21:62.91:0,63,538	0/0:12,0:12:32.99:0,33,286	0/0:16,1:17:8.37:0,8,304	0/0:19,0:19:53.02:0,53,448	0/0:14,0:14:29.99:0,30,260	0/0:12,0:12:29.93:0,30,249	0/0:19,0:19:53.98:0,54,469	0/0:12,0:12:23.99:0,24,208	0/0:14,0:14:38.74:0,39,324	0/0:19,0:19:47.98:0,48,416	0/0:19,0:19:50.98:0,51,442	0/0:15,0:16:44.79:0,45,390
chr10	94882344	.	AT	A	4009.13	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.744;DP=707;FS=5.888;HRun=4;HaplotypeScore=91.0213;InbreedingCoeff=0.9835;MQ=74.20;MQ0=0;MQRankSum=1.061;QD=32.07;ReadPosRankSum=0.967;VQSLOD=3.9867;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,147,2017	0/0:14,0:14:39.13:0,39,546	0/0:16,0:16:45.14:0,45,586	0/0:16,0:16:8.01:0,8,377	0/0:29,0:29:81.27:0,81,1133	0/0:25,0:25:72.24:0,72,1000	0/0:23,0:23:69.23:0,69,960	0/0:40,0:40:99:0,114,1563	0/0:23,0:23:54.17:0,54,741	0/0:28,0:28:84.27:0,84,1160	0/0:28,0:28:60.20:0,60,840	0/0:25,0:25:75.25:0,75,1049	0/0:27,0:27:78.26:0,78,1088	0/0:20,0:20:57.10:0,57,751	0/0:31,0:31:90.21:0,90,1201	0/0:26,0:26:75.23:0,75,1015	0/0:26,0:26:69.23:0,69,965	0/0:12,0:12:33.11:0,33,457	1/1:2,17:19:51.03:578,51,0	1/1:1,24:25:72.22:863,72,0	1/1:2,32:34:96.29:1152,96,0	0/0:25,0:25:54.18:0,54,754	0/0:21,0:21:51.15:0,51,684	0/0:37,0:36:96.31:0,96,1328	0/0:22,0:22:57.19:0,57,791	1/1:1,22:23:66.18:769,66,0	1/1:1,23:24:54.16:647,54,0	0/0:15,0:15:42.13:0,42,572
chr10	94882769	.	G	GGA	15392.24	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-16.303;DP=631;FS=6.619;HRun=0;HaplotypeScore=74.7227;InbreedingCoeff=0.9993;MQ=83.34;MQ0=1;MQRankSum=-1.874;QD=40.51;ReadPosRankSum=1.826;VQSLOD=6.8592;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,41:45:99:1873,111,0	0/0:7,0:7:21.07:0,21,270	0/0:22,0:22:51.15:0,51,637	0/0:22,0:20:33.79:0,34,456	0/0:28,0:28:81.25:0,81,1028	1/1:3,15:18:39.13:658,39,0	1/1:3,17:20:39.13:658,39,0	1/1:9,15:25:48.14:781,48,0	0/0:19,0:19:54.17:0,54,682	0/0:20,0:20:51.16:0,51,655	0/0:24,0:24:69.21:0,69,875	1/1:3,16:19:51.17:856,51,0	1/1:0,16:16:42.14:709,42,0	1/1:3,17:20:48.16:808,48,0	0/0:25,0:25:69.22:0,69,888	0/0:24,0:24:66.21:0,66,837	0/0:29,0:29:87.28:0,87,1119	0/0:13,0:13:33.11:0,33,425	1/1:4,17:22:57.19:948,57,0	1/1:4,29:33:90.24:1477,90,0	1/1:1,18:19:42.14:709,42,0	1/1:8,25:33:78.27:1315,78,0	1/1:5,17:22:44.76:759,45,0	1/1:0,17:17:48.16:810,48,0	0/0:18,0:18:51.17:0,51,654	1/1:2,23:25:69.24:1165,69,0	1/1:4,27:30:78.27:1313,78,0	1/1:1,12:13:33.11:553,33,0
chr10	94882901	.	GA	G	3466.67	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=4.895;DP=536;FS=14.173;HRun=9;HaplotypeScore=61.2179;InbreedingCoeff=0.9903;MQ=81.83;MQ0=0;MQRankSum=-4.046;QD=22.96;ReadPosRankSum=-3.554;VQSLOD=1.9161;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:60.18:0,60,692	0/0:2,0:5:11.52:0,12,70	0/0:15,0:15:24.07:0,24,317	0/0:17,0:16:32.87:0,33,333	0/0:2,0:33:85.65:0,86,452	0/0:18,0:18:51.14:0,51,580	0/0:19,0:19:51.15:0,51,588	1/1:5,23:28:63:567,63,0	0/0:0,0:8:17.04:0,17,87	0/0:16,0:16:41.96:0,42,465	0/0:16,1:18:20.50:0,20,462	0/0:17,0:17:45.13:0,45,519	0/0:22,0:22:60.17:0,60,682	0/0:15,0:15:36.11:0,36,415	0/0:1,0:22:51.13:0,51,260	0/0:1,0:16:39.93:0,40,214	0/0:19,0:19:51.15:0,51,589	0/0:19,0:19:57.17:0,57,658	1/1:2,20:22:60.02:545,60,0	1/1:3,28:31:84.04:768,84,0	1/1:1,11:12:30.01:275,30,0	0/0:25,0:25:69.19:0,69,787	0/0:21,0:21:57.16:0,57,648	0/0:22,0:22:60.12:0,60,668	0/0:2,0:12:28.41:0,28,144	1/1:2,19:21:57.01:517,57,0	1/1:3,24:27:56.92:521,57,0	1/1:0,10:10:30.02:275,30,0
chr10	94883595	.	TTCTA	T	3790.03	PASS	AB=0.875;AC=41;AF=0.788;AN=52;BaseQRankSum=3.414;DP=432;FS=0.000;HRun=0;HaplotypeScore=100.9430;InbreedingCoeff=0.6511;MQ=58.36;MQ0=5;MQRankSum=-0.811;QD=11.59;ReadPosRankSum=1.345;VQSLOD=3.1005;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:26:5.79:75,6,0	1/1:2,0:3:2.99:24,3,0	./.	./.	1/1:9,0:25:8.57:83,9,0	1/1:12,8:20:18.06:275,18,0	1/1:9,0:9:0.47:1,0,0	0/0:36,0:35:1.25:0,1,3	1/1:7,0:17:9.01:84,9,0	1/1:8,6:13:18.06:275,18,0	1/1:3,3:6:6.02:92,6,0	0/0:15,0:15:15.04:0,15,303	1/1:8,9:17:24.08:367,24,0	1/1:6,3:9:3.01:46,3,0	1/1:7,0:15:12.01:112,12,0	1/1:5,0:7:3:28,3,0	1/1:15,0:15:1.25:3,1,0	0/0:14,0:12:17.61:0,18,161	1/1:10,8:18:24.05:336,24,0	0/0:16,0:16:15.04:0,15,300	0/0:16,0:16:12.04:0,12,275	1/1:3,12:16:39.13:578,39,0	1/1:14,7:21:5.99:92,6,0	0/1:12,0:14:0:0,0,0	1/1:7,0:15:9.01:84,9,0	1/1:10,8:18:24.08:367,24,0	1/1:9,10:19:27.05:387,27,0	1/1:8,14:21:33.08:480,33,0
chr10	94883761	.	TATATAGAG	T	2605.92	PASS	AB=0.917;AC=27;AF=0.519;AN=52;BaseQRankSum=3.344;DP=224;FS=15.399;HRun=0;HaplotypeScore=108.2963;InbreedingCoeff=0.4844;MQ=88.29;MQ0=1;MQRankSum=-5.766;QD=17.37;ReadPosRankSum=-0.427;VQSLOD=1.5338;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:13.94:108,14,0	0/0:1,0:1:3.01:0,3,83	0/0:10,0:7:0.29:0,0,66	0/1:22,0:17:17.81:18,0,129	0/0:3,0:3:9.02:0,9,192	1/1:17,0:17:33.11:482,33,0	1/1:12,0:12:3.52:277,4,0	0/1:6,3:8:7.03:146,0,7	0/0:4,0:4:6.02:0,6,162	0/0:7,0:7:21.02:0,21,224	0/0:11,0:11:3.16:0,3,27	1/1:7,0:7:2.48:247,2,0	1/1:11,1:12:33.11:499,33,0	1/1:7,2:9:15.05:235,15,0	0/0:3,0:3:3.01:0,3,99	./.	0/0:12,0:12:36.12:0,36,1470	0/0:12,0:12:30.10:0,30,1077	0/1:3,0:3:15.23:39,0,15	1/1:6,0:6:8.02:54,8,0	./.	1/1:13,2:15:21.07:301,21,0	1/1:11,2:13:5.97:90,6,0	0/0:4,0:4:0:0,0,0	0/0:3,0:3:6.02:0,6,108	1/1:5,0:5:14.97:119,15,0	1/1:6,0:6:11.99:122,12,0	1/1:2,0:2:3.01:41,3,0
chr10	94883763	.	TATAGAG	T	5134.89	PASS	AB=1.000;AC=30;AF=0.600;AN=50;BaseQRankSum=0.784;DP=225;FS=10.586;HRun=0;HaplotypeScore=94.4764;InbreedingCoeff=0.6094;MQ=89.69;MQ0=1;MQRankSum=-6.079;QD=31.89;ReadPosRankSum=-0.927;VQSLOD=3.7689;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:14.43:354,14,0	0/0:1,0:1:3.01:0,3,54	0/1:9,0:6:16.58:17,0,62	0/1:24,0:18:0.95:1,0,100	0/0:3,0:3:7.84:0,8,111	1/1:1,15:16:33.11:795,33,0	1/1:1,11:12:21.07:510,21,0	1/1:8,2:9:9.02:167,9,0	0/0:4,0:4:6.02:0,6,104	0/0:7,0:7:0.86:0,1,5	0/0:11,0:11:0.62:0,1,2	1/1:1,6:7:18.06:432,18,0	1/1:1,11:12:33.11:789,33,0	1/1:2,7:9:15.05:353,15,0	0/0:3,0:3:3.01:0,3,71	./.	0/0:12,0:12:36.12:0,36,1139	0/0:12,0:12:33.08:0,33,829	1/1:0,3:3:9.02:173,9,0	1/1:0,6:6:8.96:165,9,0	./.	1/1:2,13:15:21.07:510,21,0	1/1:2,11:13:5.94:142,6,0	./.	0/0:2,0:3:4.83:0,5,55	1/1:0,5:5:15.05:368,15,0	1/1:0,6:6:12.04:288,12,0	1/1:1,1:2:3.01:73,3,0
chr10	94883793	.	AATATATATATATATATATATATACATAT	A	675.14	PASS	AC=14;AF=0.467;AN=30;BaseQRankSum=3.542;DP=159;FS=0.000;HRun=0;HaplotypeScore=132.0441;InbreedingCoeff=0.4805;MQ=85.77;MQ0=0;MQRankSum=-3.074;QD=13.24;ReadPosRankSum=-2.793;VQSLOD=1.8460;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:0:0,0,1	./.	0/0:8,0:4:2.80:0,3,13	0/0:20,0:13:2.59:0,3,79	0/0:1,0:1:3.01:0,3,46	1/1:11,2:13:6.02:353,6,0	./.	0/0:11,0:11:12.04:0,12,586	./.	./.	1/1:2,0:2:0.47:1,0,0	./.	1/1:8,1:10:6.02:277,6,0	1/1:5,2:7:5.93:40,6,0	./.	./.	0/0:11,0:12:27.09:0,27,2617	0/0:13,0:13:27.09:0,27,2448	./.	./.	./.	1/1:8,1:9:2.98:21,3,0	1/1:6,1:7:2.54:74,3,0	1/1:1,1:3:2.97:20,3,0	./.	./.	./.	0/0:3,0:3:0.29:0,0,322
chr10	94884160	.	TAA	T	7461.62	PASS	AB=0.550;AC=43;AF=0.768;AN=56;BaseQRankSum=-1.499;DP=565;FS=9.301;HRun=13;HaplotypeScore=84.7430;InbreedingCoeff=0.8807;MQ=71.59;MQ0=5;MQRankSum=-2.473;QD=18.20;ReadPosRankSum=3.699;VQSLOD=3.6377;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:31:51.39:0,51,229	1/1:0,4:4:8.98:87,9,0	0/0:19,0:11:14.31:0,14,113	0/0:15,1:14:27.94:0,28,245	1/1:4,19:25:44.42:401,44,0	1/1:2,17:21:44.55:402,45,0	1/1:5,8:14:26.51:227,27,0	0/0:15,2:42:17.14:0,17,230	1/1:4,14:18:39.03:378,39,0	1/1:3,0:27:66.01:289,66,0	1/1:0,1:15:33.16:160,33,0	1/1:3,18:21:47.99:465,48,0	1/1:2,11:14:35.79:332,36,0	1/1:5,21:25:57.04:552,57,0	1/1:2,9:11:17.84:174,18,0	1/1:2,18:20:48.07:466,48,0	0/0:30,0:31:77.72:0,78,1057	0/0:16,0:16:42.07:0,42,531	1/1:6,19:26:41.81:499,42,0	1/1:3,14:16:26.97:262,27,0	1/1:6,12:19:27:262,27,0	1/1:3,13:16:29.99:291,30,0	1/1:4,14:18:33.02:320,33,0	1/1:1,11:12:33.04:320,33,0	1/1:2,8:11:26.77:245,27,0	1/1:7,21:27:56.99:546,57,0	1/1:7,27:36:77.58:722,78,0	0/1:2,3:11:45.91:60,0,46
chr10	94884900	.	T	TGAC	8474.13	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-1.631;DP=604;FS=4.438;HRun=0;HaplotypeScore=122.3333;InbreedingCoeff=0.9810;MQ=76.67;MQ0=0;MQRankSum=-5.906;QD=53.30;ReadPosRankSum=1.370;VQSLOD=6.8775;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,2068	0/0:3,0:3:6.02:0,6,100	0/0:18,0:15:45.15:0,45,743	0/0:21,0:18:36.59:0,37,580	0/0:18,0:18:48.16:0,48,799	0/0:22,0:22:63.19:0,63,1017	0/0:19,0:19:51.16:0,51,816	0/0:32,0:32:93.30:0,93,1483	0/0:23,0:23:63.22:0,63,1050	1/1:3,18:21:51.17:1152,51,0	1/1:1,12:13:30.10:676,30,0	0/0:23,0:23:66.21:0,66,1065	0/0:24,0:24:72.22:0,72,1143	0/0:14,0:14:42.14:0,42,695	0/0:27,0:27:75.24:0,75,1208	0/0:16,0:16:48.15:0,48,764	0/0:30,0:30:84.27:0,84,1374	0/0:17,0:17:48.16:0,48,799	1/1:3,27:30:81.26:1708,81,0	1/1:1,18:19:51.17:1112,51,0	1/1:7,25:33:51.17:1153,51,0	0/0:22,0:22:63.22:0,63,1049	0/0:12,0:12:33.11:0,33,548	0/0:26,0:26:72.25:0,72,1191	0/0:20,0:20:57.19:0,57,948	1/1:4,23:27:72.25:1598,72,0	1/1:0,16:16:48.16:1075,48,0	0/0:16,0:16:48.16:0,48,800
chr10	94891479	.	AG	A	1056.73	PASS	AC=12;AF=0.261;AN=46;BaseQRankSum=1.915;DP=196;FS=0.000;HRun=1;HaplotypeScore=26.4873;InbreedingCoeff=0.6654;MQ=23.36;MQ0=55;MQRankSum=-1.332;QD=17.61;ReadPosRankSum=1.562;VQSLOD=3.6888;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:3:6.02:0,6,95	0/0:4,0:4:11.89:0,12,127	./.	./.	0/0:15,0:11:24:0,24,352	0/0:6,0:6:15.05:0,15,239	0/0:4,0:1:3.01:0,3,48	./.	0/0:6,0:4:12.04:0,12,191	1/1:0,8:3:9.03:126,9,0	1/1:0,16:8:21.07:292,21,0	0/0:4,0:3:9.03:0,9,143	0/0:8,0:7:14.80:0,15,208	0/0:2,0:2:3.01:0,3,48	0/0:4,0:4:9.03:0,9,143	0/0:4,0:4:3.01:0,3,48	0/0:2,0:2:6.02:0,6,95	0/0:2,0:1:3.01:0,3,48	1/1:1,4:1:3.01:42,3,0	1/1:0,11:6:18.06:251,18,0	./.	0/0:5,0:2:6.02:0,6,95	0/0:17,0:11:24.01:0,24,352	./.	0/0:6,0:3:9.03:0,9,141	1/1:0,6:5:15.05:210,15,0	1/1:0,14:11:21.07:293,21,0	0/0:2,0:1:3.01:0,3,48
chr10	94892805	.	A	AT	2091.62	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-10.679;DP=545;FS=1.519;HRun=10;HaplotypeScore=58.2955;InbreedingCoeff=0.9671;MQ=66.88;MQ0=0;MQRankSum=0.970;QD=20.31;ReadPosRankSum=1.012;VQSLOD=4.5580;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:45:99:0,116,937	1/1:1,5:6:15.04:160,15,0	0/0:7,0:8:9.80:0,10,61	0/0:5,0:5:8.98:0,9,73	1/1:9,18:27:36.21:591,36,0	0/0:22,0:22:59.92:0,60,492	0/0:25,0:26:70.95:0,71,572	0/0:34,0:34:86.67:0,87,698	1/1:5,19:24:45.58:480,46,0	0/0:19,0:20:49.98:0,50,400	0/0:22,0:22:50.91:0,51,418	0/0:16,0:16:44.93:0,45,366	0/0:12,0:12:32.95:0,33,271	0/0:6,0:7:20.02:0,20,154	1/1:1,11:12:24.06:256,24,0	1/1:5,14:19:42.09:438,42,0	0/0:21,0:23:67:0,67,529	0/0:14,0:14:35.94:0,36,293	0/0:20,0:22:55.97:0,56,448	0/0:17,0:17:44.93:0,45,369	0/0:21,0:22:58.94:0,59,474	0/0:14,0:14:32.95:0,33,271	0/0:24,0:24:62.87:0,63,514	0/0:18,0:18:44.94:0,45,370	1/1:4,11:15:14.44:353,14,0	0/0:28,0:29:73.93:0,74,597	0/0:25,0:24:59.89:0,60,492	0/0:16,0:15:15.69:0,16,269
chr10	94893122	.	G	GC	6627.04	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-8.212;DP=572;FS=11.362;HRun=5;HaplotypeScore=78.5923;InbreedingCoeff=0.9962;MQ=73.58;MQ0=0;MQRankSum=-1.230;QD=35.82;ReadPosRankSum=2.429;VQSLOD=4.0334;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,38:41:99:1463,112,0	0/0:5,0:5:15.04:0,15,161	0/0:23,0:24:51.37:0,51,520	0/0:15,0:15:35.76:0,36,353	0/0:23,0:23:57.14:0,57,612	1/1:1,18:19:51.17:671,51,0	1/1:2,14:16:42.14:553,42,0	0/0:38,0:38:99:0,102,1085	0/0:19,0:19:54.14:0,54,580	0/0:20,0:20:50.87:0,51,548	0/0:17,0:17:36.09:0,36,387	1/1:0,24:24:66.21:868,66,0	1/1:0,16:16:45.15:592,45,0	1/1:0,17:17:45.15:592,45,0	0/0:19,0:19:54.13:0,54,580	0/0:21,0:21:57.14:0,57,613	0/0:28,0:28:75.18:0,75,806	0/0:22,0:22:66.17:0,66,709	0/0:20,0:20:51.13:0,51,548	0/0:21,0:21:54.12:0,54,572	0/0:30,0:30:84.19:0,84,894	1/1:2,18:20:51.17:670,51,0	1/1:1,16:17:51.17:666,51,0	1/1:0,15:15:42.14:553,42,0	0/0:19,0:19:57.14:0,57,613	0/0:18,0:18:54.14:0,54,580	0/0:18,0:18:54.14:0,54,580	0/0:10,0:10:18.04:0,18,193
chr10	94893394	.	AAACCAACC	A	5660.87	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=10.730;DP=690;FS=3.324;HRun=0;HaplotypeScore=192.4814;InbreedingCoeff=0.9714;MQ=72.23;MQ0=0;MQRankSum=-8.943;QD=24.61;ReadPosRankSum=-1.617;VQSLOD=4.4364;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:43:99:0,99,3873	0/0:4,0:7:15.03:0,15,368	0/0:35,0:29:20.81:0,21,621	0/0:32,0:29:30.09:0,30,808	0/0:13,0:24:39.11:0,39,1267	0/0:26,0:26:54.15:0,54,2032	0/0:32,0:32:72.25:0,72,2703	1/1:16,5:21:15.02:203,15,0	0/0:11,0:21:33.11:0,33,1044	1/1:13,0:30:42.37:694,42,0	1/1:12,0:30:45.11:771,45,0	0/0:17,0:17:36.10:0,36,1207	0/0:17,0:17:39.09:0,39,1359	0/0:21,0:21:48.16:0,48,1972	0/0:17,0:33:60.21:0,60,1894	0/0:4,0:16:24.08:0,24,839	0/0:31,0:31:69.15:0,69,2447	0/0:12,0:14:26.98:0,27,810	1/1:19,5:24:15.03:279,15,0	1/1:15,16:31:36.12:906,36,0	1/1:13,8:21:15.05:371,15,0	0/0:25,0:25:57.18:0,57,2222	0/0:21,0:21:51.16:0,51,1838	0/0:27,0:27:63.22:0,63,2419	0/0:10,0:18:21.07:0,21,753	1/1:21,22:43:66.14:1452,66,0	1/1:10,14:24:33.11:833,33,0	1/1:4,2:6:6.02:152,6,0
chr10	94893896	.	T	TC	170.47	PASS	AB=0.731;AC=4;AF=0.67;AN=6;BaseQRankSum=0.505;DP=19;FS=7.160;HRun=1;HaplotypeScore=103.9368;MQ=247.31;MQ0=0;MQRankSum=-0.938;QD=8.97;ReadPosRankSum=0.361;VQSLOD=0.8751;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:4,5:9:9.50:145,0,9	0/1:7,2:9:15.14:89,0,15	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:1,0:1:0.89:2,1,0	./.	./.	./.	./.	./.	./.
chr10	94894977	.	A	AAC	745.32	PASS	AB=0.833;AC=10;AF=0.185;AN=54;BaseQRankSum=8.216;DP=236;FS=22.658;HRun=0;HaplotypeScore=73.3276;InbreedingCoeff=0.6653;MQ=36.42;MQ0=2;MQRankSum=-4.859;QD=15.53;ReadPosRankSum=2.314;VQSLOD=1.5367;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:11:30:0,30,380	0/1:2,2:4:3.76:113,0,4	0/0:8,0:3:5.99:0,6,66	./.	1/1:6,2:8:5.60:81,6,0	0/0:16,0:16:44.37:0,44,586	0/0:10,0:10:27.01:0,27,316	0/0:8,0:7:21.07:0,21,314	1/1:3,2:5:12.89:137,13,0	0/0:11,0:10:26.63:0,27,285	0/0:10,0:10:24.47:0,24,309	0/0:9,0:9:21.08:0,21,245	0/0:11,0:11:32.37:0,32,360	0/0:5,0:5:14.92:0,15,145	0/1:6,0:6:20.51:48,0,21	1/1:12,1:13:22.81:175,23,0	0/0:9,0:9:12.98:0,13,215	0/0:5,0:4:9.01:0,9,106	0/0:9,0:9:27.06:0,27,345	0/0:11,0:11:29.24:0,29,304	0/0:4,0:4:10.27:0,10,113	0/0:5,0:5:11.98:0,12,139	0/0:6,0:6:18.04:0,18,245	0/0:10,0:10:14.66:0,15,138	1/1:6,6:12:17.33:348,17,0	0/0:9,0:9:23.98:0,24,288	0/0:13,0:13:35.79:0,36,426	0/0:1,0:1:2.84:0,3,14
chr10	94894981	.	AAC	A	127.05	PASS	AB=0.960;AC=10;AF=0.185;AN=54;BaseQRankSum=6.199;DP=253;FS=20.005;HRun=0;HaplotypeScore=76.9924;InbreedingCoeff=-0.1339;MQ=37.12;MQ0=3;MQRankSum=-4.783;QD=1.61;ReadPosRankSum=2.228;VQSLOD=0.0732;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:31.61:0,32,608	0/0:4,0:4:12.03:0,12,171	0/0:9,0:3:9.03:0,9,143	./.	0/0:8,0:8:13.39:0,13,94	0/0:17,0:17:14.32:0,14,721	0/0:10,0:10:27.07:0,27,475	0/0:11,0:9:27.07:0,27,425	0/0:5,0:5:13.84:0,14,127	0/1:10,1:10:28.95:29,0,415	0/0:11,0:11:9.78:0,10,413	0/1:9,0:9:48.72:49,0,189	0/1:12,0:12:39.97:40,0,328	0/1:6,0:6:2.54:3,0,250	0/0:6,0:6:9.15:0,9,131	0/0:13,0:13:6.65:0,7,165	0/0:10,0:10:27.09:0,27,473	0/0:6,0:5:12.04:0,12,199	0/0:9,1:10:12.53:0,13,441	0/1:10,2:12:85.97:86,0,359	0/0:5,0:5:5.29:0,5,184	0/1:5,0:5:15.99:16,0,100	0/0:6,0:6:3.71:0,4,264	0/0:11,0:11:6.50:0,7,197	0/0:12,0:12:32.53:0,33,361	0/1:9,1:10:17.98:18,0,351	0/1:13,0:13:11.67:12,0,519	1/1:1,0:1:0.89:2,1,0
chr10	94894999	.	C	CA	1091.60	PASS	AB=0.947;AC=16;AF=0.286;AN=56;BaseQRankSum=9.585;DP=319;FS=34.255;HRun=4;HaplotypeScore=80.3457;InbreedingCoeff=0.7375;MQ=43.77;MQ0=8;MQRankSum=-6.777;QD=12.69;ReadPosRankSum=0.552;VQSLOD=0.8157;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:36.58:0,37,432	1/1:1,3:4:9.03:124,9,0	0/1:15,0:7:5.35:5,0,159	0/0:12,0:2:2.83:0,3,36	1/1:7,4:11:21.40:217,21,0	0/0:20,0:20:55.94:0,56,626	0/0:12,0:12:30.09:0,30,353	0/1:15,2:13:82.60:91,0,83	1/1:4,3:7:19.41:180,19,0	0/0:10,0:10:28.90:0,29,329	0/0:18,0:18:46.03:0,46,566	0/0:12,0:12:23.70:0,24,260	0/0:11,0:11:13.12:0,13,238	0/0:7,0:7:17.66:0,18,190	1/1:4,0:4:8.08:47,8,0	1/1:12,1:13:29.30:240,29,0	0/0:14,0:14:37:0,37,432	0/0:9,0:9:27.08:0,27,323	0/0:15,0:14:34.86:0,35,384	0/0:17,0:16:40.92:0,41,439	0/0:5,0:5:12.04:0,12,141	0/0:9,0:9:14.06:0,14,149	0/0:8,0:8:19.87:0,20,220	0/0:11,0:11:23.99:0,24,266	1/1:5,7:12:35.23:368,35,0	0/0:13,0:11:30.09:0,30,356	0/0:16,0:16:36.16:0,36,433	1/1:1,2:1:0.47:1,0,0
chr10	94895009	.	AAC	A	1241.75	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=12.170;DP=351;FS=60.716;HRun=0;HaplotypeScore=90.2698;InbreedingCoeff=0.4665;MQ=51.41;MQ0=8;MQRankSum=-7.500;QD=8.56;ReadPosRankSum=-1.080;VQSLOD=0.9019;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:36.05:0,36,614	1/1:4,0:4:9.04:42,9,0	0/0:20,0:12:8.32:0,8,289	0/0:14,0:3:1.96:0,2,79	1/1:7,4:11:19.21:288,19,0	0/0:22,0:22:20.89:0,21,852	0/0:9,0:9:27.09:0,27,475	0/1:20,0:17:98.96:111,0,99	1/1:7,3:10:19.82:205,20,0	0/1:17,0:16:2.81:3,0,432	0/0:19,0:19:47.35:0,47,850	0/1:11,0:11:11.60:12,0,376	0/1:11,0:11:6.48:6,0,344	0/0:7,0:7:17.35:0,17,294	1/1:4,0:4:5.53:42,6,0	1/1:8,4:12:29.70:311,30,0	0/0:15,0:15:29.41:0,29,654	0/0:10,0:10:30.07:0,30,475	0/0:14,0:12:34.90:0,35,515	0/0:20,0:19:18.93:0,19,671	0/0:6,0:6:18:0,18,237	0/0:11,0:11:23.84:0,24,350	0/1:14,0:14:18.65:19,0,403	0/0:11,0:11:29.89:0,30,450	1/1:7,5:12:32.38:360,32,0	0/0:15,0:13:38.49:0,38,598	0/1:16,0:16:25.33:25,0,501	1/1:3,0:1:0.89:2,1,0
chr10	94895013	.	A	AC	176.20	PASS	AB=0.927;AC=6;AF=0.107;AN=56;BaseQRankSum=6.494;DP=363;FS=27.346;HRun=0;HaplotypeScore=90.9118;InbreedingCoeff=0.1648;MQ=51.69;MQ0=8;MQRankSum=-5.386;QD=3.39;ReadPosRankSum=-4.107;VQSLOD=0.6647;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.10:0,39,522	0/0:4,0:4:11.52:0,12,62	0/0:20,0:12:24.27:0,24,305	0/0:16,0:4:1.61:0,2,78	0/0:11,0:11:13.48:0,13,105	0/0:22,0:22:46.56:0,47,716	0/0:10,0:10:27.09:0,27,376	0/0:23,0:20:48.98:0,49,438	0/0:9,0:9:20.37:0,20,120	0/0:17,0:16:41.57:0,42,451	0/0:19,0:19:36.67:0,37,692	0/1:11,1:12:5.84:6,0,333	0/1:10,2:12:58.34:58,0,301	0/0:7,0:7:18.95:0,19,252	1/1:1,3:4:12:114,12,0	0/1:11,0:11:81.88:83,0,82	0/0:15,0:15:42.11:0,42,565	0/0:11,0:11:33.05:0,33,420	0/0:15,0:13:33.08:0,33,432	0/0:22,0:21:7.94:0,8,607	0/0:6,0:6:18.02:0,18,229	0/1:12,1:13:36.56:37,0,321	0/0:13,1:14:4.93:0,5,421	0/0:12,0:12:33.10:0,33,441	0/0:12,0:12:34.63:0,35,204	0/0:16,0:14:42.04:0,42,538	0/0:14,0:14:31.54:0,32,437	0/0:3,0:1:2.97:0,3,20
chr10	94895016	.	AAAC	A	1170.32	PASS	AB=0.972;AC=16;AF=0.286;AN=56;BaseQRankSum=11.072;DP=368;FS=62.121;HRun=0;HaplotypeScore=97.5083;InbreedingCoeff=0.4587;MQ=52.02;MQ0=8;MQRankSum=-9.007;QD=8.80;ReadPosRankSum=-1.860;VQSLOD=0.3097;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:34.10:0,34,728	1/1:0,4:4:12.04:176,12,0	0/1:20,0:12:2.64:3,0,340	0/1:15,0:5:2.93:3,0,110	1/1:6,4:10:24.33:254,24,0	0/0:22,0:22:26.11:0,26,1070	0/0:10,0:10:30.10:0,30,603	0/0:24,0:21:16.33:0,16,583	1/1:4,6:10:15.34:294,15,0	0/1:17,0:16:11.81:12,0,542	0/0:20,0:20:48.33:0,48,1070	0/0:12,0:12:6.41:0,6,488	0/0:12,0:12:11.13:0,11,493	0/0:7,0:7:8.83:0,9,355	1/1:4,0:4:0.72:26,1,0	0/1:8,2:10:4.86:176,0,5	0/0:16,0:16:45.14:0,45,891	0/0:11,0:11:33.07:0,33,630	0/0:16,0:13:36.11:0,36,666	0/0:21,0:20:46.48:0,46,992	0/0:6,0:6:15.05:0,15,317	0/0:13,0:13:20.46:0,20,521	0/1:14,0:14:2.80:3,0,581	0/0:12,0:12:33:0,33,637	1/1:7,7:14:6.28:377,6,0	0/0:17,0:15:39.46:0,39,790	0/1:15,0:15:11.43:11,0,583	0/0:3,0:1:0.89:0,1,2
chr10	94895019	.	CAAAACAAA	C	1682.27	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=8.295;DP=378;FS=38.948;HRun=0;HaplotypeScore=133.7346;InbreedingCoeff=0.7154;MQ=54.12;MQ0=8;MQRankSum=-5.365;QD=22.14;ReadPosRankSum=-0.121;VQSLOD=1.5720;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:33.05:0,33,1190	1/1:4,0:4:12.04:179,12,0	0/1:23,0:12:11.40:11,0,227	0/0:14,0:6:14.98:0,15,250	1/1:5,3:9:7.12:358,7,0	0/0:22,0:22:62.18:0,62,1924	0/0:10,0:10:27.02:0,27,770	0/0:23,0:20:45.03:0,45,947	1/1:8,2:10:27.08:427,27,0	0/0:17,0:16:40.61:0,41,983	0/0:19,0:20:51.17:0,51,1926	0/0:13,0:13:34.81:0,35,962	0/0:13,0:13:30.06:0,30,920	0/0:7,0:7:15.94:0,16,552	0/1:5,0:5:6.51:45,0,7	1/1:7,3:10:3.71:266,4,0	0/0:16,0:16:48.04:0,48,1537	0/0:11,0:11:33.11:0,33,1213	0/0:17,0:14:36.08:0,36,1122	0/0:22,0:21:56.72:0,57,1693	0/0:7,0:7:18.06:0,18,620	0/0:13,0:13:27.09:0,27,890	0/0:14,0:14:35.32:0,35,1008	0/0:13,0:13:33.04:0,33,931	1/1:13,2:15:41.65:563,42,0	0/0:19,0:17:42.13:0,42,1344	0/0:15,0:15:37.88:0,38,1159	0/0:3,0:1:3.01:0,3,78
chr10	94895024	.	CAAA	C	1221.34	PASS	AB=0.879;AC=12;AF=0.214;AN=56;BaseQRankSum=9.464;DP=390;FS=33.710;HRun=7;HaplotypeScore=99.4186;InbreedingCoeff=0.6094;MQ=57.84;MQ0=7;MQRankSum=-4.843;QD=14.04;ReadPosRankSum=-0.191;VQSLOD=-0.6954;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:36.08:0,36,726	1/1:1,4:5:15.01:183,15,0	0/1:23,0:14:34.48:34,0,252	0/1:12,0:6:1.19:1,0,251	1/1:4,4:9:15.05:237,15,0	0/0:21,0:22:33.40:0,33,1190	0/0:10,0:10:27.09:0,27,577	0/0:23,0:20:54.62:0,55,1015	1/1:4,6:10:27.08:332,27,0	0/0:20,0:21:52.98:0,53,839	0/0:21,0:21:58.04:0,58,1205	0/0:13,0:13:31.80:0,32,608	0/0:14,0:14:36.05:0,36,684	0/0:7,0:7:20.76:0,21,357	1/1:3,0:3:3.71:48,4,0	0/1:8,2:10:3.28:145,0,3	0/0:17,0:17:51.17:0,51,1053	0/0:12,0:12:36.12:0,36,781	0/0:17,0:14:39.13:0,39,826	0/0:20,0:20:56.34:0,56,1150	0/0:9,0:9:24.07:0,24,472	0/0:15,0:15:32.69:0,33,665	0/0:14,0:14:33.53:0,34,713	0/0:13,0:13:39.05:0,39,749	0/1:8,7:15:4.82:401,0,5	0/0:23,0:21:59.99:0,60,1102	0/0:15,0:15:37.08:0,37,702	0/0:3,0:1:2.99:0,3,24
chr10	94895782	.	TG	T	11945.60	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=11.458;DP=687;FS=1.373;HRun=7;HaplotypeScore=67.7901;InbreedingCoeff=0.9991;MQ=82.08;MQ0=0;MQRankSum=-3.208;QD=25.69;ReadPosRankSum=3.744;VQSLOD=5.5725;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,33:38:90.20:918,90,0	1/1:0,15:15:45.10:459,45,0	0/0:29,0:29:72.78:0,73,833	0/0:17,0:17:33.08:0,33,390	1/1:2,26:28:69.15:703,69,0	1/1:4,14:18:42.09:428,42,0	1/1:4,23:27:57.12:582,57,0	1/1:4,29:33:84.17:850,84,0	1/1:1,25:26:66.15:673,66,0	1/1:2,25:27:72.14:722,72,0	1/1:1,16:17:39.09:398,39,0	1/1:0,25:25:72.16:735,72,0	1/1:2,18:20:48.11:490,48,0	1/1:0,24:24:66.15:673,66,0	1/1:0,22:22:57.13:582,57,0	1/1:2,26:28:69.16:704,69,0	0/0:27,0:27:81.25:0,81,1004	0/0:15,0:14:45.14:0,45,566	0/0:23,0:23:60.17:0,60,739	0/0:25,0:25:69.22:0,69,868	0/0:36,0:36:99:0,99,1232	1/1:2,9:11:27.06:275,27,0	1/1:3,23:26:63.14:643,63,0	1/1:3,37:40:99:1010,99,0	1/1:0,32:32:87.20:888,87,0	0/0:23,0:23:66.21:0,66,826	0/0:27,0:27:78.23:0,78,960	1/1:1,7:8:21.05:214,21,0
chr10	94896334	.	CCTGATGTAGCTCT	C	24592.92	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=11.611;DP=742;FS=0.000;HRun=0;HaplotypeScore=295.4010;InbreedingCoeff=0.9919;MQ=92.83;MQ0=0;MQRankSum=-18.286;QD=83.93;ReadPosRankSum=2.832;VQSLOD=3.7707;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:48.16:1848,48,0	0/0:17,0:17:51.16:0,51,3119	0/0:39,0:39:99:0,117,6734	0/0:35,0:35:99:0,105,4897	0/0:32,0:32:96.33:0,96,5992	1/1:0,18:18:45.15:1861,45,0	1/1:0,20:20:45.15:1805,45,0	1/1:0,30:30:90.29:2871,90,0	0/0:26,0:26:75.26:0,75,4216	1/1:1,32:33:90.23:2861,90,0	1/1:0,21:21:51.17:1814,51,0	1/1:0,25:25:57.20:2377,57,0	1/1:1,14:15:36.12:1428,36,0	1/1:1,24:25:63.22:2584,63,0	0/0:32,0:32:96.33:0,96,5961	0/0:22,0:22:66.20:0,66,3948	0/0:35,0:35:99:0,105,5983	0/0:30,0:30:90.31:0,90,5464	0/0:21,0:21:63.22:0,63,3439	0/0:27,0:27:81.26:0,81,5184	0/0:46,0:46:99:0,135,7961	1/1:0,27:27:66.01:2406,66,0	1/1:0,18:18:30.10:1206,30,0	1/1:0,20:20:30.10:1156,30,0	0/0:30,0:30:90.31:0,90,5801	0/0:33,0:33:99:0,99,6284	0/0:24,0:24:72.23:0,72,4141	1/1:0,6:6:9.03:377,9,0
chr10	94897470	.	G	GA	2274.88	PASS	AB=0.568;AC=8;AF=0.143;AN=56;BaseQRankSum=-6.459;DP=578;FS=15.167;HRun=9;HaplotypeScore=61.3055;InbreedingCoeff=0.6858;MQ=74.92;MQ0=0;MQRankSum=-2.484;QD=21.26;ReadPosRankSum=-0.929;VQSLOD=2.4944;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,108,937	0/0:6,0:6:15:0,15,130	0/0:15,0:15:17.20:0,17,185	0/0:5,0:6:9:0,9,78	0/0:24,0:24:68.99:0,69,599	0/0:33,0:33:71.95:0,72,625	0/0:24,0:24:56.96:0,57,491	0/0:22,0:22:50.97:0,51,442	0/0:19,0:19:29.62:0,30,365	0/0:20,0:20:47.97:0,48,415	0/0:22,0:22:59.98:0,60,518	0/0:25,0:25:44.67:0,45,548	0/0:21,0:21:47.97:0,48,417	0/0:16,0:17:44.02:0,44,371	0/0:16,0:16:41.99:0,42,365	0/0:22,0:22:53.97:0,54,465	0/0:29,0:29:83.97:0,84,729	0/0:16,0:16:38.99:0,39,338	1/1:5,8:13:24.06:264,24,0	1/1:3,21:24:37.11:636,37,0	0/1:3,10:13:48.09:202,0,48	0/0:20,0:20:50.97:0,51,443	0/0:25,0:25:74.99:0,75,651	0/0:18,1:19:14.81:0,15,358	0/0:14,0:14:38.83:0,39,327	0/1:5,15:20:27.44:394,0,27	1/1:9,28:37:64.05:932,64,0	0/0:12,0:12:31.18:0,31,283
chr10	94898284	.	GAGCTGTCCCCTGAA	G	2137.25	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.214;DP=708;FS=0.000;HRun=0;HaplotypeScore=300.2387;InbreedingCoeff=0.9375;MQ=90.71;MQ0=1;MQRankSum=-7.360;QD=59.37;ReadPosRankSum=0.156;VQSLOD=2.3792;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,21:36:57.20:2232,57,0	0/0:5,0:5:9.03:0,9,615	0/0:31,0:31:72.23:0,72,3335	0/0:26,0:26:52.42:0,52,2456	0/0:29,0:29:54.17:0,54,3273	0/0:23,0:23:57.18:0,57,3330	0/0:28,0:28:69.24:0,69,4232	0/0:25,0:25:60.21:0,60,3938	0/0:20,0:20:48.16:0,48,3257	0/0:24,0:24:45.15:0,45,2620	0/0:11,0:11:18.06:0,18,1156	0/0:34,0:34:87.29:0,87,5550	0/0:19,0:19:48.16:0,48,3266	0/0:19,0:19:48.15:0,48,2833	0/0:40,0:40:96.33:0,96,6156	0/0:28,0:28:75.26:0,75,4403	0/0:35,0:35:96.33:0,96,6294	0/0:25,0:25:72.25:0,72,4352	0/0:17,0:17:36.12:0,36,2071	0/0:24,0:24:48.16:0,48,3145	0/0:46,0:45:96.33:0,96,6072	0/0:29,0:29:78.22:0,78,4671	0/0:24,0:24:57.20:0,57,3644	0/0:33,0:33:75.26:0,75,4378	0/0:17,0:17:48.16:0,48,3119	0/0:21,0:21:51.17:0,51,3010	0/0:25,0:25:58.44:0,58,3485	0/0:14,0:14:30.10:0,30,1889
chr10	94899326	.	AGT	A	1043.34	PASS	AB=0.939;AC=28;AF=0.609;AN=46;BaseQRankSum=4.106;DP=642;FS=0.792;HRun=0;HaplotypeScore=142.8614;InbreedingCoeff=-0.3890;MQ=67.67;MQ0=23;MQRankSum=-1.356;QD=2.34;ReadPosRankSum=1.029;VQSLOD=2.6892;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:3.01:31,3,0	0/1:12,2:14:24.12:55,0,24	./.	./.	0/1:19,0:18:19.69:20,0,120	0/1:18,1:19:22.95:23,0,65	0/1:21,0:21:25.20:25,0,85	0/0:26,0:25:0.89:0,1,2	0/1:24,1:25:8.88:9,0,243	1/1:25,0:24:0.47:1,0,0	1/1:12,0:14:8.69:60,9,0	0/1:9,2:11:34.93:55,0,35	0/1:17,0:17:23.47:46,0,23	0/0:18,0:18:3.01:0,3,38	0/1:23,0:25:26.06:26,0,223	0/1:16,0:16:18.87:19,0,38	1/1:29,7:36:29.79:299,30,0	0/1:21,4:25:19.93:200,0,20	./.	1/1:21,0:25:11.32:55,11,0	./.	0/1:30,0:30:19.69:20,0,102	0/1:17,0:15:12.07:12,0,115	0/1:25,2:26:14.06:37,0,14	0/1:11,1:13:51.92:52,0,69	1/1:21,0:23:8.52:42,9,0	1/1:9,0:15:19.72:94,20,0	./.
chr10	94900148	.	AT	A	3562.78	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.012;DP=527;FS=8.506;HRun=2;HaplotypeScore=52.1372;InbreedingCoeff=0.9873;MQ=78.26;MQ0=0;MQRankSum=-0.998;QD=30.19;ReadPosRankSum=0.710;VQSLOD=2.3418;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.10:0,69,951	1/1:0,11:11:27:321,27,0	0/0:13,0:13:39.09:0,39,529	0/0:11,0:11:23.19:0,23,342	1/1:0,27:27:75.06:870,75,0	0/0:20,0:20:59.99:0,60,843	0/0:23,0:23:69.22:0,69,988	0/0:31,0:31:90.29:0,90,1280	1/1:0,18:18:51.17:661,51,0	0/0:13,0:13:39.12:0,39,540	0/0:16,0:16:45.13:0,45,656	0/0:21,0:21:63.21:0,63,919	0/0:12,0:12:33.11:0,33,482	0/0:18,0:18:54.18:0,54,787	1/1:1,26:27:57.19:738,57,0	1/1:0,16:16:36.12:467,36,0	0/0:27,0:27:81.16:0,81,1134	0/0:20,0:20:57.19:0,57,824	0/0:20,0:20:60.17:0,60,807	0/0:37,0:37:99:0,111,1562	0/0:15,0:15:45.15:0,45,654	0/0:12,0:12:36.06:0,36,448	0/0:14,0:14:42.14:0,42,603	0/0:14,0:14:39.11:0,39,550	1/1:0,19:19:39.13:505,39,0	0/0:29,0:29:87.22:0,87,1194	0/0:16,0:16:45.15:0,45,656	0/0:3,0:3:9:0,9,109
chr10	94901074	.	G	GT	1927.11	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-3.903;DP=474;FS=0.626;HRun=6;HaplotypeScore=50.8755;InbreedingCoeff=0.9770;MQ=75.85;MQ0=0;MQRankSum=-1.785;QD=25.69;ReadPosRankSum=2.792;VQSLOD=3.5873;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,117,1130	1/1:0,6:6:15.05:182,15,0	0/0:20,0:20:45.03:0,45,434	0/0:12,0:12:28.84:0,29,237	1/1:3,8:11:24.08:300,24,0	0/0:9,0:9:20.40:0,20,190	0/0:23,0:23:66.05:0,66,643	0/0:28,0:28:66.06:0,66,638	1/1:0,19:19:45.14:550,45,0	0/0:14,0:14:39.07:0,39,392	0/0:15,0:15:36.07:0,36,365	0/0:23,0:23:66.05:0,66,640	0/0:22,0:22:60.11:0,60,604	0/0:5,0:5:9.01:0,9,91	1/1:1,20:21:45.14:546,45,0	1/1:0,8:8:24.01:272,24,0	0/0:27,0:27:78.16:0,78,787	0/0:14,0:14:33.02:0,33,325	0/0:15,0:15:42.05:0,42,413	0/0:9,0:9:24.05:0,24,244	0/0:27,0:27:78.09:0,78,763	0/0:24,0:24:66.11:0,66,653	0/0:12,0:12:18.10:0,18,290	0/0:17,0:17:51.10:0,51,514	1/1:2,8:10:21.07:263,21,0	0/0:16,0:16:42.09:0,42,428	0/0:18,0:18:54.08:0,54,537	0/0:5,0:5:15.01:0,15,144
chr10	94901257	.	C	CGCGAGTTGTTCT	31464.48	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-2.802;DP=513;FS=6.221;HRun=0;HaplotypeScore=153.0318;InbreedingCoeff=0.9542;MQ=86.33;MQ0=0;MQRankSum=-16.131;QD=102.49;ReadPosRankSum=2.330;VQSLOD=4.8857;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,10:28:54.03:1868,54,0	1/1:6,0:6:18.06:887,18,0	0/0:27,0:28:76.59:0,77,2357	0/0:27,0:27:78.20:0,78,2410	1/1:13,0:13:30.09:1273,30,0	1/1:0,19:22:57.20:3303,57,0	1/1:0,12:20:33.11:1871,33,0	1/1:0,3:19:50.54:1632,51,0	1/1:12,0:12:8.12:1354,8,0	1/1:0,9:14:36.11:1983,36,0	1/1:1,6:13:15.05:899,15,0	1/1:0,19:32:57.20:3322,57,0	1/1:0,12:19:36.12:2156,36,0	1/1:5,6:11:30.10:1660,30,0	1/1:26,0:26:22.25:2919,22,0	1/1:15,0:15:42.14:1965,42,0	0/0:28,0:28:75.23:0,75,2706	0/0:17,0:17:48.16:0,48,1900	0/0:18,0:18:45.15:0,45,1693	0/0:13,0:13:39.07:0,39,1221	0/0:30,0:30:87.23:0,87,2999	1/1:1,5:13:18.06:932,18,0	1/1:0,4:10:18.06:964,18,0	1/1:0,8:17:18.03:725,18,0	1/1:13,0:13:33.11:1574,33,0	0/0:24,0:24:72.23:0,72,2489	0/0:21,0:21:60.17:0,60,2058	1/1:0,1:3:3.01:179,3,0
chr10	94901259	.	C	CGAGTTGTTCTAG	42129	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-4.810;DP=538;FS=3.492;HRun=0;HaplotypeScore=174.7408;InbreedingCoeff=0.9892;MQ=84.70;MQ0=0;MQRankSum=-17.222;QD=126.51;ReadPosRankSum=-0.655;VQSLOD=5.1251;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:33:60.05:2235,60,0	1/1:1,6:8:21.07:1288,21,0	0/0:29,0:29:70.05:0,70,2171	0/0:26,0:27:72.21:0,72,2301	1/1:6,11:20:45.11:1950,45,0	1/1:25,0:25:69.22:3654,69,0	1/1:18,0:17:48.16:2757,48,0	1/1:14,0:14:42.13:1702,42,0	1/1:13,7:24:54.19:2794,54,0	1/1:11,0:11:33.11:1887,33,0	1/1:8,0:8:21.06:1018,21,0	1/1:27,0:27:66.23:3779,66,0	1/1:15,0:15:45.15:2632,45,0	1/1:18,0:18:54.18:2490,54,0	1/1:14,16:33:87.26:4457,87,0	1/1:8,10:19:54.19:3212,54,0	0/0:28,0:28:75.25:0,75,2569	0/0:17,0:17:48.16:0,48,1805	0/0:19,0:19:54.09:0,54,1580	0/0:13,0:13:36.11:0,36,1103	0/0:27,0:27:75.26:0,75,2747	1/1:13,0:13:38.85:1355,39,0	1/1:11,0:11:30.10:1391,30,0	1/1:15,0:15:24.01:944,24,0	1/1:4,10:16:39.13:2127,39,0	0/0:24,0:24:69.22:0,69,2294	0/0:21,0:21:54.19:0,54,1840	1/1:3,0:3:9.03:457,9,0
chr10	94901370	.	G	GAA	7660.39	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=1.550;DP=563;FS=0.734;HRun=9;HaplotypeScore=80.8499;InbreedingCoeff=0.9952;MQ=60.62;MQ0=13;MQRankSum=-3.958;QD=24.95;ReadPosRankSum=0.136;VQSLOD=4.5459;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:36:46.91:392,47,0	0/0:8,0:7:18.04:0,18,191	0/0:8,0:8:21.03:0,21,213	0/0:9,0:8:15.79:0,16,198	0/0:22,0:22:47.87:0,48,495	1/1:2,20:23:48.16:720,48,0	1/1:9,13:21:30.01:391,30,0	1/1:3,19:22:25.21:755,25,0	0/0:19,0:19:51.10:0,51,532	1/1:7,2:29:69.06:627,69,0	1/1:4,1:23:43.22:369,43,0	1/1:3,21:23:60.20:916,60,0	1/1:2,13:15:35.99:538,36,0	1/1:7,8:13:35.45:414,35,0	0/0:25,0:24:63.10:0,63,660	0/0:21,0:20:51.09:0,51,542	0/0:22,0:22:57.13:0,57,606	0/0:17,0:17:42.08:0,42,446	0/0:26,0:24:60.09:0,60,623	0/0:8,0:8:24.06:0,24,255	0/0:19,0:19:57.09:0,57,580	1/1:6,21:27:60.10:838,60,0	1/1:7,14:21:38.62:562,39,0	1/1:8,25:33:54.18:814,54,0	0/0:13,0:13:27.06:0,27,286	0/0:20,0:21:53.82:0,54,544	0/0:18,0:18:42.08:0,42,447	1/1:0,8:9:21.07:323,21,0
chr10	94902165	.	G	GA	3813.18	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-10.672;DP=704;FS=7.917;HRun=6;HaplotypeScore=65.3080;InbreedingCoeff=0.9915;MQ=79.63;MQ0=0;MQRankSum=-0.287;QD=29.56;ReadPosRankSum=1.516;VQSLOD=4.3130;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,1062	1/1:3,5:8:12.04:151,12,0	0/0:15,0:15:23.22:0,23,257	0/0:25,0:25:62.19:0,62,632	1/1:0,14:14:42.05:492,42,0	0/0:16,0:16:42.06:0,42,418	0/0:37,0:36:99:0,105,1053	0/0:34,0:34:90.17:0,90,899	1/1:7,17:24:45.14:566,45,0	0/0:29,0:29:75.17:0,75,764	0/0:13,0:13:36.08:0,36,367	0/0:23,0:23:60.12:0,60,605	0/0:34,0:34:87.15:0,87,871	0/0:30,0:30:84.17:0,84,849	1/1:3,33:36:87.28:1095,87,0	1/1:0,20:20:54.17:679,54,0	0/0:42,0:42:99:0,126,1264	0/0:26,0:26:75.13:0,75,749	0/0:23,0:23:59.72:0,60,591	0/0:24,0:24:60.12:0,60,607	0/0:52,0:52:99:0,141,1423	0/0:17,0:17:42.09:0,42,428	0/0:13,0:13:36.08:0,36,366	0/0:37,0:37:93.21:0,93,948	1/1:3,24:27:66.21:829,66,0	0/0:24,0:24:63.12:0,63,635	0/0:17,0:17:42.09:0,42,428	0/0:6,0:6:18.04:0,18,183
chr10	94904214	.	TCTTC	T	4394.62	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.299;DP=651;FS=3.070;HRun=0;HaplotypeScore=115.5513;InbreedingCoeff=0.9709;MQ=62.04;MQ0=3;MQRankSum=0.663;QD=30.95;ReadPosRankSum=3.361;VQSLOD=4.8818;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:57.13:0,57,1292	1/1:3,12:15:29.99:446,30,0	0/0:10,0:5:7.10:0,7,166	0/0:9,0:7:9.03:0,9,224	1/1:2,20:22:56.87:706,57,0	0/0:26,0:26:72.24:0,72,1597	0/0:19,0:19:54.16:0,54,1143	0/0:36,0:36:84.24:0,84,1661	1/1:1,27:28:51.17:852,51,0	0/0:35,0:35:93.28:0,93,2080	0/0:34,0:34:81.23:0,81,1784	0/0:26,0:26:63.19:0,63,1461	0/0:30,0:30:69.23:0,69,1563	0/0:18,0:18:48.15:0,48,1140	1/1:4,14:18:33.11:559,33,0	1/1:1,26:27:45.15:763,45,0	0/0:20,0:20:51.17:0,51,1165	0/0:12,0:12:27.09:0,27,632	0/0:8,0:25:50.58:0,51,674	0/0:8,0:37:96.03:0,96,1396	0/0:2,0:25:39.12:0,39,652	0/0:25,0:25:72.13:0,72,1579	0/0:21,0:21:54.14:0,54,1137	0/0:15,0:15:33.07:0,33,666	1/1:6,26:32:63.22:1069,63,0	0/0:5,0:24:60.18:0,60,991	0/0:5,0:23:33.10:0,33,550	0/0:15,0:15:39.06:0,39,761
chr10	94905053	.	A	AGT	28958.47	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-10.485;DP=1152;FS=3.065;HRun=0;HaplotypeScore=227.9145;InbreedingCoeff=0.9991;MQ=61.89;MQ0=5;MQRankSum=-2.016;QD=37.80;ReadPosRankSum=1.188;VQSLOD=4.7236;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,35:48:98.62:1610,99,0	0/0:9,0:9:24.08:0,24,305	0/0:46,0:36:62.32:0,62,853	0/0:46,0:43:92.99:0,93,1109	0/0:37,0:37:93.28:0,93,1169	1/1:5,28:33:72.25:1203,72,0	1/1:3,31:34:81.28:1355,81,0	1/1:19,41:61:99:2015,125,0	0/0:54,0:54:99:0,123,1737	1/1:8,42:50:99:2003,123,0	1/1:4,31:35:84.29:1405,84,0	1/1:11,44:55:91.25:2057,91,0	1/1:9,42:50:99:2057,123,0	1/1:6,31:37:84.29:1404,84,0	0/0:51,0:51:99:0,132,1680	0/0:43,0:43:99:0,123,1538	0/0:41,0:42:90.75:0,91,1166	0/0:25,0:25:65.91:0,66,794	1/1:13,16:29:51.13:814,51,0	1/1:6,42:47:79.23:1865,79,0	1/1:6,72:79:99:3173,192,0	1/1:10,35:46:96.33:1604,96,0	1/1:5,25:30:72.25:1203,72,0	1/1:3,43:46:70.10:1718,70,0	0/0:33,0:33:93.26:0,93,1183	1/1:4,36:41:99:1782,111,0	1/1:3,32:34:81.28:1340,81,0	1/1:0,7:7:21.07:351,21,0
chr10	94906269	.	TA	T	5089.53	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.597;DP=785;FS=3.500;HRun=2;HaplotypeScore=90.7366;InbreedingCoeff=0.9982;MQ=89.67;MQ0=0;MQRankSum=-1.012;QD=35.10;ReadPosRankSum=4.146;VQSLOD=5.2329;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:64:99:0,193,2846	1/1:0,11:11:30.10:389,30,0	0/0:33,0:33:52.03:0,52,1127	0/0:27,0:27:35:0,35,887	1/1:1,15:16:45.15:584,45,0	0/0:22,0:22:66.22:0,66,987	0/0:30,0:29:90.29:0,90,1324	0/0:42,0:42:99:0,120,1708	1/1:0,34:34:93.30:1207,93,0	0/0:27,0:27:78.26:0,78,1164	0/0:12,0:12:36.11:0,36,519	0/0:48,0:48:99:0,144,2136	0/0:23,0:23:69.23:0,69,1014	0/0:33,0:33:99:0,99,1439	1/1:1,46:47:99:1556,120,0	1/1:1,23:24:69.22:887,69,0	0/0:40,0:40:99:0,120,1777	0/0:16,0:16:45.15:0,45,674	0/0:19,0:19:57.18:0,57,835	0/0:22,0:22:63.21:0,63,941	0/0:49,0:49:99:0,144,2106	0/0:19,0:19:57.18:0,57,834	0/0:22,0:22:63.20:0,63,923	0/0:37,0:37:99:0,102,1528	1/1:0,13:13:36.12:467,36,0	0/0:26,0:26:78.26:0,78,1152	0/0:23,0:23:63.20:0,63,923	0/0:6,0:6:18.04:0,18,230
chr10	94906286	.	CG	C	942.07	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.789;DP=739;FS=4.614;HRun=3;HaplotypeScore=99.1315;InbreedingCoeff=0.9946;MQ=89.56;MQ0=0;MQRankSum=-1.326;QD=28.55;ReadPosRankSum=0.451;VQSLOD=2.7585;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:66:99:0,193,2652	0/0:10,0:10:24.08:0,24,346	0/0:25,0:26:68.86:0,69,971	0/0:29,0:29:81.27:0,81,1139	0/0:18,0:18:48.16:0,48,690	0/0:24,0:24:72.24:0,72,1036	0/0:28,0:27:84.28:0,84,1206	0/0:30,0:30:87.27:0,87,1217	0/0:29,0:29:84.28:0,84,1206	1/1:2,20:22:54.15:655,54,0	1/1:0,11:11:33.10:409,33,0	0/0:39,0:39:99:0,111,1560	0/0:26,0:26:78.26:0,78,1121	0/0:32,0:32:96.31:0,96,1362	0/0:43,0:43:99:0,117,1663	0/0:24,0:24:69.22:0,69,969	0/0:45,0:45:99:0,132,1838	0/0:16,0:16:48.14:0,48,670	0/0:20,0:20:60.16:0,60,819	0/0:19,0:19:57.19:0,57,820	0/0:40,0:40:99:0,111,1595	0/0:15,0:15:42.13:0,42,586	0/0:23,0:23:66.22:0,66,937	0/0:41,0:41:99:0,117,1683	0/0:14,0:14:39.12:0,39,539	0/0:21,0:21:57.18:0,57,803	0/0:22,0:22:66.18:0,66,894	0/0:6,0:6:18.06:0,18,259
chr10	94907766	.	TG	T	5524.38	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.934;DP=748;FS=0.338;HRun=2;HaplotypeScore=83.8092;InbreedingCoeff=0.9788;MQ=82.52;MQ0=0;MQRankSum=-1.924;QD=35.64;ReadPosRankSum=3.050;VQSLOD=5.3417;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,154,2289	1/1:0,9:9:27.09:351,27,0	0/0:16,0:18:43.32:0,43,554	0/0:23,0:23:62.46:0,62,815	1/1:0,32:32:90.29:1165,90,0	0/0:27,0:27:81.27:0,81,1209	0/0:29,0:29:87.29:0,87,1302	0/0:23,0:23:69.23:0,69,1034	1/1:1,27:28:78.25:1013,78,0	0/0:32,0:32:93.30:0,93,1369	0/0:21,0:21:63.21:0,63,943	0/0:26,0:26:75.25:0,75,1123	0/0:35,0:35:99:0,102,1527	0/0:35,0:35:99:0,102,1518	1/1:0,39:39:99:1399,108,0	1/1:0,27:27:72.23:935,72,0	0/0:31,0:31:93.32:0,93,1393	0/0:27,0:27:81.27:0,81,1212	0/0:23,0:23:69.20:0,69,990	0/0:15,0:15:45.14:0,45,653	0/0:35,0:35:99:0,102,1526	0/0:21,0:21:63.21:0,63,944	0/0:16,0:16:48.16:0,48,719	0/0:40,0:40:99:0,117,1751	1/1:0,20:20:51.17:662,51,0	0/0:30,0:30:84.28:0,84,1239	0/0:32,0:32:93.30:0,93,1373	0/0:2,0:2:6.02:0,6,90
chr10	94908592	.	GT	G	1719.81	PASS	AB=0.824;AC=18;AF=0.321;AN=56;BaseQRankSum=-2.169;DP=605;FS=9.841;HRun=15;HaplotypeScore=76.4818;InbreedingCoeff=0.3065;MQ=72.36;MQ0=4;MQRankSum=0.964;QD=5.99;ReadPosRankSum=3.685;VQSLOD=2.0690;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,2:30:13.20:0,13,398	0/0:5,0:15:22.84:0,23,118	0/0:32,0:16:8.49:0,8,102	0/1:19,0:13:3.89:4,0,17	0/0:12,0:22:30.11:0,30,181	0/1:21,5:27:20.90:166,0,21	0/1:11,13:25:3.14:161,0,3	0/0:26,3:32:11.92:0,12,305	0/0:10,0:24:18.60:0,19,102	0/1:12,13:27:22.39:156,0,22	0/1:16,2:18:33.75:92,0,34	0/1:12,5:18:44.32:116,0,44	1/1:9,4:13:0.12:122,0,0	1/1:13,4:18:18.56:196,19,0	0/0:10,0:16:25.36:0,25,132	0/0:9,1:25:9.75:0,10,137	0/0:15,0:16:34.84:0,35,275	0/1:24,2:27:17.86:18,0,326	0/0:19,0:19:9.27:0,9,285	0/1:20,1:22:8.43:8,0,267	0/0:10,0:10:3.84:0,4,144	1/1:16,6:22:39.27:242,39,0	1/1:5,11:16:20.50:134,20,0	1/1:22,11:34:78.67:483,79,0	0/0:2,0:16:23.03:0,23,135	0/0:29,0:32:34.88:0,35,371	0/0:17,0:19:32.96:0,33,254	0/0:6,0:8:14.83:0,15,116
chr10	94908694	.	TGACA	T	9020.13	PASS	AB=0.960;AC=39;AF=0.696;AN=56;BaseQRankSum=10.819;DP=580;FS=6.333;HRun=0;HaplotypeScore=102.3900;InbreedingCoeff=0.8753;MQ=70.14;MQ0=0;MQRankSum=-0.516;QD=22.38;ReadPosRankSum=0.971;VQSLOD=3.9034;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,30:46:60.20:976,60,0	1/1:5,11:16:27.09:427,27,0	0/0:21,0:19:15.49:0,15,230	0/0:18,0:17:18.20:0,18,376	1/1:10,5:15:15.04:244,15,0	1/1:6,13:19:42.10:655,42,0	1/1:8,14:22:33.11:537,33,0	1/1:8,12:20:36.06:478,36,0	1/1:3,12:15:24.08:391,24,0	1/1:7,11:18:39.13:634,39,0	1/1:3,5:8:15.05:244,15,0	1/1:6,9:15:15.05:244,15,0	1/1:9,17:26:30.10:488,30,0	1/1:7,9:16:24.08:390,24,0	1/1:5,15:20:39.13:635,39,0	1/1:6,15:21:33.11:537,33,0	0/0:30,0:30:72.23:0,72,1614	0/0:24,0:24:42.14:0,42,977	0/0:18,0:18:21.07:0,21,476	0/0:22,0:22:42.14:0,42,987	0/0:23,0:23:45.15:0,45,1069	1/1:12,10:22:24.08:371,24,0	1/1:11,11:22:24.08:391,24,0	1/1:12,23:35:45.15:732,45,0	1/1:7,13:20:33.11:537,33,0	0/1:23,1:24:61.48:61,0,692	0/0:21,0:20:51.17:0,51,1201	1/1:2,1:3:3.01:49,3,0
chr10	94908981	.	A	AT	13263.88	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=-6.296;DP=758;FS=10.345;HRun=9;HaplotypeScore=81.1062;InbreedingCoeff=0.7814;MQ=81.80;MQ0=2;MQRankSum=-1.090;QD=20.04;ReadPosRankSum=0.197;VQSLOD=4.6829;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,44:47:59.19:1109,59,0	1/1:1,8:9:27.07:294,27,0	0/1:25,0:25:9.52:10,0,252	0/1:18,0:18:10.25:10,0,124	1/1:4,30:34:87.14:934,87,0	1/1:1,19:20:54.15:597,54,0	1/1:4,27:31:66.18:730,66,0	1/1:6,16:22:48.13:531,48,0	1/1:6,20:26:54.15:597,54,0	0/0:24,0:24:30.89:0,31,440	0/0:20,0:22:58.06:0,58,481	1/1:4,23:27:37.11:630,37,0	1/1:8,34:42:28.08:954,28,0	1/1:3,23:26:66.18:729,66,0	1/1:6,26:32:52.12:790,52,0	1/1:3,22:25:63.10:682,63,0	0/0:28,0:28:80.96:0,81,698	0/0:22,0:22:50.98:0,51,443	1/1:7,0:26:33.98:293,34,0	1/1:2,1:26:65.77:358,66,0	1/1:7,2:35:62.83:351,63,0	1/1:4,23:28:37.06:615,37,0	1/1:3,17:20:28.09:538,28,0	1/1:7,22:30:26.27:665,26,0	1/1:4,22:26:60.16:664,60,0	1/1:4,0:33:82.81:436,83,0	1/1:5,1:39:76.57:381,77,0	1/1:0,12:12:33.09:365,33,0
chr10	94909194	.	A	AT	16011.47	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-11.027;DP=633;FS=8.047;HRun=8;HaplotypeScore=56.8713;InbreedingCoeff=0.9968;MQ=79.88;MQ0=0;MQRankSum=-4.761;QD=29.06;ReadPosRankSum=3.292;VQSLOD=5.0742;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,31:37:87.26:1004,87,0	1/1:1,18:19:54.08:606,54,0	0/0:20,0:21:40.97:0,41,397	0/0:19,0:19:19.46:0,19,254	1/1:4,25:29:75.22:865,75,0	1/1:3,23:26:41.74:734,42,0	1/1:4,11:15:35.94:395,36,0	1/1:6,20:26:60.17:682,60,0	1/1:2,18:20:48.14:554,48,0	1/1:0,27:27:81.23:925,81,0	1/1:1,18:20:54.03:590,54,0	1/1:3,19:22:51.15:589,51,0	1/1:2,26:28:75.22:866,75,0	1/1:3,17:20:48.14:548,48,0	1/1:2,16:18:45.13:519,45,0	1/1:0,17:17:45.13:519,45,0	0/0:24,0:24:71.99:0,72,644	0/0:17,0:17:50.92:0,51,444	1/1:3,23:26:38.69:670,39,0	1/1:2,32:34:93.24:1060,93,0	1/1:1,20:21:54.16:623,54,0	1/1:1,20:21:60.18:692,60,0	1/1:2,20:22:35.80:665,36,0	1/1:2,9:11:27.08:312,27,0	1/1:3,22:25:41.74:734,42,0	1/1:3,22:25:66.16:741,66,0	1/1:7,25:32:56.78:897,57,0	1/1:2,7:10:20.89:222,21,0
chr10	94910128	.	TTGA	T	5442.34	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.025;DP=761;FS=0.371;HRun=0;HaplotypeScore=107.8043;InbreedingCoeff=0.9996;MQ=89.61;MQ0=0;MQRankSum=-2.523;QD=40.61;ReadPosRankSum=3.300;VQSLOD=6.1412;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,2775	1/1:1,11:12:24.08:376,24,0	0/0:26,0:26:72.24:0,72,1432	0/0:31,0:31:75.24:0,75,1474	1/1:2,16:18:45.11:706,45,0	0/0:25,0:25:66.23:0,66,1403	0/0:27,0:27:81.28:0,81,1744	0/0:36,0:36:96.33:0,96,2127	1/1:2,30:32:78.27:1266,78,0	0/0:29,0:29:84.29:0,84,1876	0/0:21,0:21:60.19:0,60,1257	0/0:31,0:31:90.31:0,90,1971	0/0:29,0:29:84.29:0,84,1876	0/0:27,0:27:81.25:0,81,1703	1/1:1,22:23:57.19:923,57,0	1/1:0,26:26:69.23:1103,69,0	0/0:26,0:25:78.19:0,78,1608	0/0:24,0:24:72.25:0,72,1589	0/0:25,0:25:69.23:0,69,1475	0/0:30,0:30:81.28:0,81,1768	0/0:32,0:32:81.26:0,81,1711	0/0:36,0:36:99:0,99,2207	0/0:24,0:24:66.23:0,66,1472	0/0:33,0:33:99:0,99,2148	1/1:1,22:23:66.23:1070,66,0	0/0:33,0:33:93.32:0,93,2059	0/0:25,0:24:66.23:0,66,1438	0/0:12,0:12:36.11:0,36,759
chr10	94910409	.	G	GATGTGTGTGT	10509.23	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=2.935;DP=810;FS=4.209;HRun=0;HaplotypeScore=252.4866;InbreedingCoeff=0.9941;MQ=71.50;MQ0=0;MQRankSum=-13.187;QD=65.68;ReadPosRankSum=0.313;VQSLOD=4.3907;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,126,3791	1/1:5,6:11:15.05:729,15,0	0/0:37,0:36:48.94:0,49,1829	0/0:28,0:27:57.17:0,57,1400	1/1:16,13:29:17.76:915,18,0	0/0:25,0:25:68.04:0,68,1933	0/0:37,0:37:78.27:0,78,2354	0/0:29,0:29:51.17:0,51,1362	1/1:14,14:29:42.14:2140,42,0	0/0:32,0:32:78.25:0,78,2203	0/0:16,0:16:42.14:0,42,1170	0/0:30,0:30:78.25:0,78,2282	0/0:25,0:25:66.23:0,66,1844	0/0:29,0:29:78.25:0,78,2289	1/1:14,21:36:51.18:2598,51,0	1/1:14,20:34:54.19:2752,54,0	0/0:27,0:27:63.22:0,63,1908	0/0:25,0:25:62.43:0,62,1872	0/0:23,0:23:45.15:0,45,1302	0/0:23,0:23:51.17:0,51,1457	0/0:65,0:65:99:0,178,5228	0/0:18,0:18:45.15:0,45,1379	0/0:15,0:15:36.12:0,36,1070	0/0:42,0:42:99:0,102,3064	1/1:11,9:21:27.09:1376,27,0	0/0:23,0:23:57.20:0,57,1635	0/0:32,0:32:81.28:0,81,2517	0/0:15,0:15:22.02:0,22,778
chr10	94910808	.	T	TG	1063.22	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=0.603;DP=525;FS=15.013;HRun=0;HaplotypeScore=83.9782;InbreedingCoeff=0.6915;MQ=70.00;MQ0=0;MQRankSum=3.968;QD=4.27;ReadPosRankSum=3.041;VQSLOD=2.2990;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:30,1:31:22.33:222,22,0	0/0:10,0:9:23.78:0,24,166	0/0:18,0:13:23.82:0,24,228	0/0:20,0:14:29.21:0,29,256	0/0:18,0:17:39.09:0,39,268	1/1:26,0:26:26.83:121,27,0	1/1:14,0:14:9.87:138,10,0	1/1:23,2:25:40.21:212,40,0	0/0:10,0:10:17.46:0,17,114	1/1:28,0:28:17.50:146,18,0	1/1:23,1:24:9.75:77,10,0	0/1:14,0:14:13.31:17,0,13	0/1:14,0:14:13.56:14,0,15	0/1:20,0:20:5.88:84,0,6	0/0:14,0:13:29.30:0,29,211	0/0:11,0:11:27.40:0,27,179	0/0:30,0:30:83.46:0,83,908	0/0:13,0:13:33.44:0,33,386	0/0:25,0:24:65.02:0,65,722	0/0:28,0:28:78.08:0,78,885	0/0:15,0:15:39.04:0,39,437	0/1:22,0:22:6.17:48,0,6	1/1:14,1:15:14.08:86,14,0	1/1:13,1:14:11.20:79,11,0	0/0:18,0:16:36.17:0,36,256	0/0:27,0:27:70.49:0,70,727	0/0:19,0:19:50.07:0,50,471	1/1:2,0:2:3.88:26,4,0
chr10	94911399	.	G	GGGAGA	5484.80	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-3.861;DP=556;FS=0.000;HRun=0;HaplotypeScore=111.0665;InbreedingCoeff=0.9851;MQ=80.67;MQ0=3;MQRankSum=-4.844;QD=50.79;ReadPosRankSum=4.084;VQSLOD=4.8633;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.16:0,87,1465	1/1:3,9:12:21.03:542,21,0	0/0:28,0:27:44.12:0,44,775	0/0:28,0:24:39.69:0,40,566	1/1:2,10:12:21.07:555,21,0	0/0:20,0:20:45.15:0,45,898	0/0:17,0:17:39.11:0,39,711	0/0:29,0:29:69.16:0,69,1124	1/1:2,20:22:39.13:1168,39,0	0/0:19,0:19:45.13:0,45,802	0/0:9,0:9:12.03:0,12,206	0/0:16,0:15:36.10:0,36,619	0/0:21,0:21:42.14:0,42,782	0/0:14,0:14:39.11:0,39,709	1/1:2,27:29:56.86:1703,57,0	1/1:2,11:13:30.10:884,30,0	0/0:25,0:25:60.19:0,60,1108	0/0:15,0:15:42.14:0,42,828	0/0:15,0:14:30.09:0,30,566	0/0:26,0:26:63.16:0,63,1099	0/0:43,0:43:99:0,108,2070	0/0:15,0:15:39.12:0,39,745	0/0:10,0:10:29.45:0,29,514	0/0:21,0:21:48.15:0,48,876	1/1:5,14:20:24.08:632,24,0	0/0:16,0:16:44.50:0,44,781	0/0:25,0:25:63.16:0,63,1103	0/0:4,0:4:12.04:0,12,240
chr10	94912422	.	T	TGCCCC	1134.86	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.318;DP=601;FS=0.977;HRun=0;HaplotypeScore=148.8809;InbreedingCoeff=0.9258;MQ=81.21;MQ0=0;MQRankSum=-5.782;QD=45.39;ReadPosRankSum=-1.619;VQSLOD=3.4165;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,12:25:45.15:1230,45,0	0/0:12,0:12:21.07:0,21,405	0/0:24,0:22:27.09:0,27,510	0/0:24,0:25:20.22:0,20,644	0/0:18,0:18:39.12:0,39,700	0/0:11,0:11:33.11:0,33,629	0/0:35,0:35:96.29:0,96,1801	0/0:21,0:21:29.23:0,29,566	0/0:22,0:22:48.15:0,48,886	0/0:20,0:20:51.17:0,51,966	0/0:13,0:13:18.02:0,18,309	0/0:20,0:20:48.15:0,48,893	0/0:12,0:12:24.08:0,24,463	0/0:35,0:35:84.27:0,84,1588	0/0:29,0:29:81.26:0,81,1523	0/0:20,0:20:60.19:0,60,1113	0/0:38,0:38:99:0,99,1911	0/0:25,0:24:66.23:0,66,1257	0/0:24,0:24:42.14:0,42,777	0/0:16,0:16:27.09:0,27,509	0/0:30,0:30:60.21:0,60,1158	0/0:17,0:17:48.16:0,48,919	0/0:17,0:17:45.15:0,45,860	0/0:33,0:33:84.29:0,84,1621	0/0:15,0:15:39.13:0,39,753	0/0:18,0:18:48.15:0,48,895	0/0:23,0:23:60.21:0,60,1156	0/0:3,0:3:9.03:0,9,174
chr10	94913341	.	T	TAG	5172.78	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=17.094;DP=582;FS=0.735;HRun=0;HaplotypeScore=109.0457;InbreedingCoeff=0.9965;MQ=89.70;MQ0=2;MQRankSum=-16.365;QD=31.73;ReadPosRankSum=3.930;VQSLOD=6.8991;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:40.17:677,40,0	0/0:8,0:8:24.05:0,24,364	0/0:31,0:31:90.30:0,90,1426	0/0:19,0:19:55.42:0,55,822	0/0:21,0:21:63.22:0,63,1026	1/1:2,19:21:49.51:689,50,0	1/1:1,21:22:60.80:789,61,0	0/0:31,0:31:90.25:0,90,1385	0/0:27,0:27:78.21:0,78,1216	0/0:24,0:24:69.24:0,69,1125	0/0:19,0:19:54.18:0,54,880	1/1:0,17:17:51.17:667,51,0	1/1:2,14:16:48.12:592,48,0	1/1:1,9:10:24.74:326,25,0	0/0:18,0:18:54.17:0,54,855	0/0:17,0:17:51.16:0,51,803	0/0:40,0:40:99:0,117,1796	0/0:14,0:14:39.13:0,39,636	0/0:15,0:15:42.12:0,42,636	0/0:28,0:28:84.27:0,84,1345	0/0:28,0:28:81.27:0,81,1301	1/1:3,13:16:43.91:551,44,0	1/1:2,18:20:35.81:565,36,0	1/1:3,9:12:26.31:317,26,0	0/0:15,0:15:39.12:0,39,636	0/0:22,1:23:27.32:0,27,1031	0/0:36,0:35:99:0,105,1655	0/0:5,0:5:15.05:0,15,244
chr10	94913342	.	C	CTGT	7276.64	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=16.169;DP=606;FS=1.133;HRun=0;HaplotypeScore=118.1539;InbreedingCoeff=0.9936;MQ=88.69;MQ0=2;MQRankSum=-16.413;QD=38.71;ReadPosRankSum=3.293;VQSLOD=6.0536;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:29:54.18:911,54,0	0/0:7,0:7:21.07:0,21,391	0/0:31,0:31:93.32:0,93,1657	0/0:20,0:20:57.19:0,57,933	0/0:21,0:21:63.22:0,63,1173	1/1:4,19:22:54.18:919,54,0	1/1:3,21:24:66.23:1154,66,0	0/0:30,0:30:90.26:0,90,1548	0/0:25,0:25:72.25:0,72,1341	0/0:25,0:25:69.24:0,69,1277	0/0:19,0:19:54.19:0,54,1004	1/1:7,17:24:51.17:885,51,0	1/1:7,13:21:26.37:758,26,0	1/1:3,9:12:27.09:458,27,0	0/0:18,0:18:51.17:0,51,950	0/0:17,0:17:51.17:0,51,928	0/0:41,0:41:99:0,117,2061	0/0:15,0:15:39.13:0,39,726	0/0:15,0:15:42.14:0,42,753	0/0:28,0:28:84.29:0,84,1554	0/0:28,0:28:81.28:0,81,1505	1/1:4,13:17:48.15:817,48,0	1/1:5,18:23:45.15:773,45,0	1/1:6,9:14:33.11:600,33,0	0/0:15,0:15:42.12:0,42,750	0/0:22,1:23:14.42:0,14,1166	0/0:35,0:34:99:0,105,1894	0/0:5,0:5:15.05:0,15,280
chr10	94913644	.	T	TA	3092.02	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.032;DP=527;FS=7.036;HRun=9;HaplotypeScore=67.9451;InbreedingCoeff=0.9590;MQ=73.58;MQ0=0;MQRankSum=-0.261;QD=22.09;ReadPosRankSum=-1.524;VQSLOD=3.9521;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:88.76:0,89,754	1/1:1,7:8:21.06:232,21,0	0/0:15,0:15:16.57:0,17,200	0/0:14,0:14:1.88:0,2,158	1/1:2,25:27:69.15:750,69,0	0/0:24,0:24:65.98:0,66,572	0/0:18,0:18:50.96:0,51,434	1/1:7,0:23:42.78:232,43,0	1/1:3,18:21:47.93:530,48,0	0/0:20,0:20:53.97:0,54,465	0/0:26,0:26:59.97:0,60,521	0/0:18,0:18:50.86:0,51,431	0/0:24,0:24:50.95:0,51,438	0/0:7,0:7:17.98:0,18,152	1/1:1,14:15:39.11:431,39,0	1/1:2,14:16:42.11:464,42,0	0/0:29,0:29:77.98:0,78,677	0/0:13,0:13:35.99:0,36,312	0/0:11,0:11:23.99:0,24,208	0/0:25,0:25:62.95:0,63,542	0/0:6,0:6:15:0,15,130	0/0:14,0:14:38.99:0,39,338	0/0:24,0:24:59.96:0,60,515	0/0:18,0:18:50.99:0,51,443	1/1:2,18:20:48.13:530,48,0	0/0:18,0:18:44.98:0,45,391	0/0:28,0:28:71.97:0,72,625	1/1:1,0:10:25.57:128,26,0
chr10	94914347	.	T	TAA	1001.87	PASS	AC=36;AF=0.783;AN=46;BaseQRankSum=-2.241;DP=161;FS=4.263;HRun=0;HaplotypeScore=36.2519;InbreedingCoeff=0.4647;MQ=76.74;MQ0=34;MQRankSum=1.758;QD=17.89;ReadPosRankSum=-4.516;VQSLOD=2.0489;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:1:3.01:47,3,0	./.	0/0:20,0:12:32.77:0,33,395	0/0:15,0:10:11.59:0,12,225	1/1:1,0:1:3.01:50,3,0	1/1:1,0:1:3:25,3,0	1/1:5,0:2:6:58,6,0	1/1:7,0:5:15.03:173,15,0	./.	1/1:1,3:4:12.03:168,12,0	1/1:3,0:2:6.01:80,6,0	1/1:4,0:1:3.01:45,3,0	1/1:2,0:1:3:28,3,0	1/1:2,0:1:2.99:24,3,0	1/1:4,0:4:12.01:127,12,0	1/1:1,0:1:3.01:35,3,0	0/0:42,0:38:73.87:0,74,962	0/0:22,0:20:56.13:0,56,622	1/1:4,0:2:6.01:62,6,0	1/1:1,0:1:3:28,3,0	1/1:5,0:2:3.01:50,3,0	1/1:1,0:1:3.01:34,3,0	./.	0/0:1,0:1:0:0,0,0	./.	1/1:1,0:1:3.01:54,3,0	1/1:3,0:1:3.01:51,3,0	./.
chr10	94914799	.	T	TGAGA	1901.73	PASS	AB=1.000;AC=36;AF=0.750;AN=48;BaseQRankSum=-0.129;DP=586;FS=0.000;HRun=0;HaplotypeScore=137.3753;InbreedingCoeff=0.3061;MQ=65.87;MQ0=12;MQRankSum=-1.289;QD=3.95;ReadPosRankSum=-1.654;VQSLOD=2.1274;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:30:14.95:257,15,0	./.	./.	0/1:51,0:24:0:0,0,0	./.	1/1:20,0:20:12.02:164,12,0	1/1:21,0:20:3.01:43,3,0	1/1:30,0:30:9.48:140,9,0	0/1:15,0:14:0:0,0,0	0/1:24,0:23:27.81:28,0,37	0/1:20,0:20:0.01:0,0,0	1/1:19,5:25:8.43:177,8,0	1/1:18,4:23:12.04:240,12,0	1/1:18,1:19:6:120,6,0	1/1:24,0:23:9.02:136,9,0	1/1:18,0:18:3.01:53,3,0	1/1:9,1:15:11.22:107,11,0	0/0:16,0:17:21.30:0,21,216	0/1:17,0:17:0.01:0,0,0	0/1:22,0:22:0.16:0,0,0	1/1:12,0:12:3.01:68,3,0	1/1:23,0:22:3.01:65,3,0	0/1:20,0:19:0:0,0,0	0/0:20,0:20:0:0,0,0	1/1:16,0:16:5.81:112,6,0	1/1:18,0:18:22.83:262,23,0	0/1:15,0:16:20.07:39,0,20	./.
chr10	94914869	.	TG	T	3188.44	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.913;DP=600;FS=7.247;HRun=1;HaplotypeScore=66.3182;InbreedingCoeff=0.9855;MQ=99.75;MQ0=0;MQRankSum=-2.107;QD=35.43;ReadPosRankSum=-0.184;VQSLOD=3.3012;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.31:0,90,1438	0/0:4,0:4:12.04:0,12,192	0/0:37,0:35:81.77:0,82,1515	0/0:46,1:42:91.15:0,91,1574	0/0:15,0:15:45.15:0,45,717	0/0:22,0:21:66.23:0,66,1054	0/0:20,0:19:57.19:0,57,911	0/0:39,0:38:99:0,117,1802	0/0:11,0:11:33.11:0,33,515	0/0:22,0:22:66.22:0,66,1037	0/0:24,0:24:69.24:0,69,1101	0/0:18,0:18:51.16:0,51,791	0/0:25,0:25:72.23:0,72,1126	0/0:11,0:11:33.08:0,33,479	0/0:29,0:29:84.29:0,84,1332	0/0:25,0:25:75.26:0,75,1190	0/0:14,0:14:42.12:0,42,645	0/0:13,0:13:33.11:0,33,527	1/1:0,18:18:51.10:654,51,0	1/1:0,23:23:63.21:881,63,0	1/1:0,15:15:30.10:419,30,0	0/0:25,0:25:72.22:0,72,1124	0/0:27,0:27:81.28:0,81,1292	0/0:24,0:24:62.96:0,63,984	0/0:23,0:23:66.21:0,66,1032	1/1:0,19:19:57.18:780,57,0	1/1:0,15:15:45.15:629,45,0	0/0:5,0:5:12.04:0,12,192
chr10	94915004	.	CA	C	4509.77	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.099;DP=723;FS=1.606;HRun=3;HaplotypeScore=68.4772;InbreedingCoeff=0.9993;MQ=88.45;MQ0=0;MQRankSum=-1.935;QD=33.65;ReadPosRankSum=2.178;VQSLOD=5.4217;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.27:0,81,1156	1/1:1,13:14:36.11:446,36,0	0/0:23,0:23:66.14:0,66,865	0/0:30,0:30:84.25:0,84,1143	1/1:0,29:29:81.21:981,81,0	0/0:42,0:42:99:0,126,1780	0/0:30,0:30:90.26:0,90,1255	0/0:33,0:33:93.29:0,93,1293	1/1:0,15:15:45.14:557,45,0	0/0:36,0:36:99:0,102,1448	0/0:33,0:33:99:0,99,1423	0/0:21,0:21:60.20:0,60,863	0/0:26,0:26:78.25:0,78,1089	0/0:24,0:24:69.23:0,69,991	1/1:0,23:23:60.19:743,60,0	1/1:1,29:30:84.26:1040,84,0	0/0:22,0:22:63.20:0,63,889	0/0:14,0:14:39.13:0,39,556	0/0:9,0:9:27.08:0,27,370	0/0:34,0:34:99:0,99,1389	0/0:24,0:24:72.24:0,72,1035	0/0:33,0:33:87.29:0,87,1252	0/0:25,0:25:75.22:0,75,1057	0/0:22,0:22:63.21:0,63,905	1/1:0,23:23:60.19:742,60,0	0/0:37,0:37:99:0,111,1597	0/0:35,0:34:99:0,99,1361	0/0:8,0:8:24.04:0,24,306
chr10	94915371	.	CTTGTTTGT	C	7717.04	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-0.420;DP=641;FS=0.000;HRun=0;HaplotypeScore=192.9507;InbreedingCoeff=0.9668;MQ=70.46;MQ0=0;MQRankSum=-12.889;QD=38.01;ReadPosRankSum=1.019;VQSLOD=4.5702;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,20:36:5.69:978,6,0	0/0:3,0:12:26.95:0,27,219	0/0:25,0:23:18.05:0,18,568	0/0:29,0:26:15.64:0,16,1049	0/0:10,0:27:53.96:0,54,484	1/1:8,24:32:66.23:1718,66,0	1/1:4,16:20:21.07:547,21,0	0/0:38,0:38:93.30:0,93,2933	0/0:3,0:14:32.96:0,33,271	0/0:23,0:23:51.17:0,51,1995	0/0:33,0:34:78.24:0,78,3069	1/1:6,17:23:45.15:1171,45,0	1/1:4,15:19:39.13:1009,39,0	1/1:8,9:17:21.07:546,21,0	0/0:4,0:18:32.96:0,33,271	0/0:4,0:20:47.96:0,48,426	0/0:29,0:29:75.24:0,75,2718	0/0:10,0:10:27.09:0,27,1081	0/0:16,0:27:57.15:0,57,1613	0/0:10,0:22:48.16:0,48,1588	0/0:4,0:18:30.10:0,30,1054	1/1:7,13:20:30.10:780,30,0	1/1:9,11:20:20.91:541,21,0	1/1:6,10:16:20.99:426,21,0	0/0:3,0:16:38.96:0,39,321	0/0:13,0:35:81.28:0,81,2885	0/0:10,0:33:60.20:0,60,2090	0/0:5,0:5:9.03:0,9,300
chr10	94915484	.	G	GCACAAGTGCATGCGCA	10720.68	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-6.671;DP=772;FS=1.760;HRun=0;HaplotypeScore=297.8251;InbreedingCoeff=0.9821;MQ=76.16;MQ0=0;MQRankSum=-9.901;QD=73.94;ReadPosRankSum=-0.478;VQSLOD=4.0540;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:96.33:0,96,4233	1/1:0,3:10:9.03:705,9,0	0/0:24,0:23:42.47:0,42,1217	0/0:27,0:29:45.66:0,46,1804	1/1:6,19:43:51.05:2889,51,0	0/0:25,0:25:72.23:0,72,2936	0/0:20,0:20:54.19:0,54,2199	0/0:29,0:29:81.20:0,81,2782	1/1:3,11:25:30.10:2347,30,0	0/0:40,0:40:99:0,111,4097	0/0:37,0:37:93.27:0,93,3498	0/0:31,0:31:87.26:0,87,3664	0/0:26,0:26:75.22:0,75,2876	0/0:22,0:22:57.16:0,57,2231	1/1:4,9:27:21.07:1643,21,0	1/1:4,5:18:15.05:1174,15,0	0/0:42,0:42:99:0,108,4123	0/0:17,0:17:45.13:0,45,1777	0/0:21,0:21:60.10:0,60,2061	0/0:23,0:23:66.13:0,66,2126	0/0:58,0:58:99:0,162,6624	0/0:23,0:23:66.19:0,66,2644	0/0:20,0:20:51.13:0,51,1803	0/0:33,0:33:90.31:0,90,4002	1/1:5,10:22:27.09:1962,27,0	0/0:34,0:34:90.11:0,90,3473	0/0:24,0:24:65.41:0,65,2666	0/0:7,0:7:18.06:0,18,706
chr10	94915767	.	C	CA	4335.83	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.221;DP=503;FS=3.037;HRun=2;HaplotypeScore=81.5554;InbreedingCoeff=0.9982;MQ=81.71;MQ0=0;MQRankSum=-1.974;QD=38.71;ReadPosRankSum=2.489;VQSLOD=5.5163;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:24.07:0,24,297	1/1:0,12:12:36.12:518,36,0	0/0:20,0:20:53.94:0,54,632	0/0:21,0:21:50.87:0,51,560	1/1:0,36:36:93.24:1313,93,0	0/0:17,0:17:51.16:0,51,632	0/0:13,0:13:36.11:0,36,446	0/0:25,0:25:63.18:0,63,762	1/1:1,16:17:48.16:691,48,0	0/0:27,0:27:78.23:0,78,950	0/0:25,0:25:75.19:0,75,912	0/0:21,0:21:63.19:0,63,769	0/0:15,0:15:42.12:0,42,508	0/0:8,0:8:21.07:0,21,259	1/1:0,14:14:39.13:562,39,0	1/1:0,12:12:36.12:518,36,0	0/0:16,0:16:48.12:0,48,569	0/0:13,0:13:38.15:0,38,452	0/0:14,0:14:39.11:0,39,471	0/0:29,0:29:84.26:0,84,1041	0/0:16,0:16:45.14:0,45,558	0/0:16,0:16:48.14:0,48,582	0/0:21,0:21:57.18:0,57,706	0/0:16,0:16:45.13:0,45,544	1/1:2,19:21:51.17:734,51,0	0/0:22,0:22:63.18:0,63,766	0/0:16,0:16:45.14:0,45,558	0/0:9,0:9:24.08:0,24,297
chr10	94916565	.	AG	A	5385.87	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-1.366;DP=667;FS=1.177;HRun=4;HaplotypeScore=100.3332;InbreedingCoeff=0.9465;MQ=54.28;MQ0=112;MQRankSum=1.007;QD=12.08;ReadPosRankSum=1.319;VQSLOD=2.9048;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:29:58.46:0,58,459	1/1:8,0:4:8.62:47,9,0	0/0:66,0:17:24.14:0,24,206	0/0:75,0:14:16.44:0,16,151	1/1:31,0:28:13.03:164,13,0	1/1:17,0:15:32.88:259,33,0	1/1:14,0:9:17.92:142,18,0	1/1:17,8:19:43.67:353,44,0	1/1:9,0:7:10.92:50,11,0	1/1:40,0:31:64.25:535,64,0	1/1:23,0:22:54.26:414,54,0	1/1:16,0:15:35.84:283,36,0	1/1:13,0:10:17.92:140,18,0	1/1:15,0:13:27.79:245,28,0	1/1:19,0:16:17.49:99,17,0	1/1:16,0:14:31.69:169,32,0	0/0:26,0:24:39.56:0,40,420	0/0:20,0:17:34.04:0,34,308	1/1:22,0:13:32.93:275,33,0	1/1:16,15:28:77.20:541,77,0	1/1:10,0:9:20.93:168,21,0	1/1:6,12:16:32.45:209,32,0	1/1:14,0:13:35.87:282,36,0	1/1:18,0:10:23.83:180,24,0	1/1:22,0:16:30.67:150,31,0	1/1:19,0:16:30.29:334,30,0	1/1:25,0:17:29.13:288,29,0	1/1:16,0:3:8.88:58,9,0
chr10	94916567	.	G	GAA	470.65	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.906;DP=636;FS=3.922;HRun=0;HaplotypeScore=130.0666;InbreedingCoeff=0.8732;MQ=57.45;MQ0=109;MQRankSum=-8.329;QD=6.82;ReadPosRankSum=5.266;VQSLOD=2.8741;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:27:47.54:0,48,959	1/1:6,1:3:5.52:48,6,0	0/0:68,0:19:44.47:0,44,531	0/0:77,0:16:28.86:0,29,322	1/1:19,3:19:10.55:220,11,0	0/0:16,0:14:33.05:0,33,318	0/0:16,0:11:20.61:0,21,196	0/0:23,0:17:44.75:0,45,407	1/1:7,0:5:6.13:19,6,0	0/0:36,0:27:68.78:0,69,592	0/0:21,0:20:54.04:0,54,517	0/0:17,0:15:29.15:0,29,285	0/0:12,0:9:18.03:0,18,172	0/0:17,0:13:29.82:0,30,269	0/0:12,0:9:0.68:0,1,3	1/1:7,6:11:22.81:241,23,0	0/0:27,0:24:53.30:0,53,908	0/0:20,0:18:47.91:0,48,721	0/0:22,0:13:30.90:0,31,274	0/0:31,0:28:73.72:0,74,760	0/0:9,0:8:18.32:0,18,170	0/0:17,0:15:33.08:0,33,352	0/0:14,0:13:36.02:0,36,336	0/0:20,0:12:24.04:0,24,237	1/1:19,1:14:17.91:100,18,0	0/0:20,0:17:48.67:0,49,414	0/0:26,0:17:28.75:0,29,358	0/0:15,0:3:7.57:0,8,66
chr10	94916570	.	A	AG	68.83	PASS	AB=0.850;AC=3;AF=0.054;AN=56;BaseQRankSum=4.680;DP=650;FS=9.656;HRun=4;HaplotypeScore=152.7415;InbreedingCoeff=-0.0609;MQ=58.05;MQ0=78;MQRankSum=-4.257;QD=1.35;ReadPosRankSum=0.310;VQSLOD=-0.4592;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:29:65.67:0,66,849	0/1:7,1:5:13.11:13,0,43	0/0:69,0:20:7.55:0,8,395	0/0:77,0:16:24.21:0,24,212	0/1:24,3:25:52.94:53,0,186	0/0:18,0:16:39.13:0,39,524	0/0:15,0:11:24.08:0,24,326	0/0:24,0:20:56.96:0,57,707	0/0:7,0:6:14.50:0,15,82	0/0:36,0:27:68.95:0,69,876	0/0:22,0:22:63.19:0,63,827	0/0:17,0:15:34.36:0,34,449	0/0:11,0:9:21.05:0,21,267	0/0:18,0:14:34.38:0,34,421	0/0:22,0:20:52.93:0,53,333	0/1:11,5:14:85.14:101,0,85	0/0:26,0:24:42.82:0,43,718	0/0:19,0:18:48.13:0,48,646	0/0:22,0:16:39.11:0,39,494	0/0:28,0:28:78.26:0,78,1034	0/0:8,0:8:21.07:0,21,280	0/0:16,0:15:36.11:0,36,467	0/0:14,0:13:36.12:0,36,488	0/0:19,0:13:33.11:0,33,443	0/0:23,1:20:19.34:0,19,228	0/0:18,0:16:48.13:0,48,616	0/0:25,0:18:47.95:0,48,585	0/0:12,0:5:13.57:0,14,135
chr10	94916623	.	GAAACA	G	453.10	PASS	AB=0.740;AC=2;AF=0.036;AN=56;BaseQRankSum=6.848;DP=540;FS=9.076;HRun=0;HaplotypeScore=153.3966;InbreedingCoeff=-0.0374;MQ=57.46;MQ0=5;MQRankSum=-4.363;QD=10.79;ReadPosRankSum=-3.480;VQSLOD=1.3530;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.65:0,73,1937	0/0:6,0:6:18.06:0,18,570	0/0:16,0:13:21.15:0,21,618	0/0:14,0:11:24.01:0,24,511	0/0:33,0:33:90.29:0,90,2421	0/0:20,0:20:60.21:0,60,1732	0/0:14,0:14:39.11:0,39,996	0/1:31,4:33:36.96:390,0,37	0/0:9,0:9:24.08:0,24,718	0/0:22,0:22:66.23:0,66,2035	0/0:26,0:26:72.21:0,72,2084	0/0:17,0:17:51.18:0,51,1580	0/0:13,0:13:39.13:0,39,1120	0/0:17,0:17:51.15:0,51,1411	0/0:20,0:20:51.17:0,51,1436	0/0:11,0:11:33.11:0,33,991	0/0:27,0:27:78.13:0,78,2102	0/0:19,0:19:51.13:0,51,1356	0/0:27,0:25:75.21:0,75,1861	0/0:29,0:29:78.25:0,78,2004	0/0:19,0:19:57.20:0,57,1698	0/0:19,0:19:57.18:0,57,1621	0/0:17,0:17:51.15:0,51,1271	0/0:15,0:15:45.13:0,45,1153	0/0:21,0:21:57.19:0,57,1664	0/0:16,0:16:48.15:0,48,1344	0/0:26,0:26:78.21:0,78,2124	0/1:2,5:7:78.15:152,0,78
chr10	94917040	.	C	CCT	2163.64	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-0.922;DP=654;FS=2.158;HRun=0;HaplotypeScore=130.3178;InbreedingCoeff=0.9974;MQ=74.26;MQ0=3;MQRankSum=-3.204;QD=15.34;ReadPosRankSum=1.643;VQSLOD=3.8810;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.04:0,72,881	1/1:12,0:12:29.19:179,29,0	0/0:30,0:18:38.82:0,39,330	0/0:20,0:16:23.17:0,23,240	1/1:32,1:33:76.47:590,76,0	0/0:30,0:30:72.13:0,72,715	0/0:24,0:24:66.10:0,66,651	0/0:31,0:31:83.89:0,84,774	1/1:23,0:23:47.97:329,48,0	0/0:31,0:31:83.24:0,83,781	0/0:22,0:22:65.74:0,66,612	0/0:25,0:25:57.11:0,57,575	0/0:23,0:23:60.03:0,60,583	0/0:16,0:16:45.07:0,45,438	1/1:18,2:20:56.04:434,56,0	1/1:24,1:25:62.61:431,63,0	0/0:17,0:17:47.18:0,47,421	0/0:19,0:19:51.03:0,51,483	0/0:24,0:24:67.66:0,68,765	0/0:37,0:37:99:0,99,1209	0/0:8,0:8:17.82:0,18,179	0/0:19,0:19:50.22:0,50,467	0/0:31,0:31:68.38:0,68,669	0/0:18,0:18:39.03:0,39,378	1/1:28,0:28:67.16:388,67,0	0/0:29,0:29:74.80:0,75,866	0/0:23,0:23:68.84:0,69,848	0/0:9,0:9:27.05:0,27,267
chr10	94917041	.	CTT	C	4484.14	PASS	AB=0.764;AC=23;AF=0.411;AN=56;BaseQRankSum=-7.914;DP=651;FS=4.145;HRun=13;HaplotypeScore=115.6247;InbreedingCoeff=0.7825;MQ=73.00;MQ0=3;MQRankSum=2.591;QD=15.57;ReadPosRankSum=2.476;VQSLOD=4.0116;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:63.16:0,63,849	0/0:13,0:13:27:0,27,240	0/1:30,0:18:8.34:8,0,214	0/0:20,0:15:15:0,15,140	0/0:33,0:33:74.72:0,75,654	1/1:2,27:30:65.83:623,66,0	1/1:2,22:24:60.06:582,60,0	1/1:6,21:30:50.59:568,51,0	0/0:23,0:23:62.98:0,63,562	0/0:10,0:31:55.14:0,55,225	0/0:11,0:22:43.31:0,43,205	1/1:2,20:24:38.85:465,39,0	1/1:3,18:23:52.11:504,52,0	1/1:5,11:16:30:291,30,0	0/0:19,0:19:46.27:0,46,409	0/0:24,0:24:61.89:0,62,552	0/1:10,1:18:19.75:20,0,137	0/1:6,2:18:24.22:24,0,77	0/0:21,0:25:56.74:0,57,660	0/0:32,1:37:59.07:0,59,1013	0/0:5,0:7:17.82:0,18,176	1/1:3,16:19:41.30:429,41,0	1/1:5,22:29:53.41:489,53,0	1/1:1,16:18:32.75:303,33,0	0/0:28,0:28:66.03:0,66,594	0/0:27,0:30:70.28:0,70,848	0/0:20,0:23:64.45:0,64,786	1/1:2,6:9:14.56:178,15,0
chr10	94917042	.	T	TC	4357.60	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-7.145;DP=655;FS=1.653;HRun=2;HaplotypeScore=113.4408;InbreedingCoeff=0.9953;MQ=71.93;MQ0=3;MQRankSum=-2.535;QD=29.44;ReadPosRankSum=2.130;VQSLOD=4.6593;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:76.31:0,76,872	1/1:4,8:12:30.03:354,30,0	0/0:29,0:17:29.71:0,30,342	0/0:20,0:15:26.10:0,26,250	1/1:16,19:35:86.71:988,87,0	0/0:30,0:30:71.75:0,72,566	0/0:24,0:24:65.71:0,66,516	0/0:30,0:30:83.02:0,83,676	1/1:7,17:24:58.31:727,58,0	0/0:30,0:30:82.83:0,83,635	0/0:22,0:22:65.57:0,66,543	0/0:24,0:24:56.55:0,57,438	0/0:23,0:23:60.24:0,60,470	0/0:16,0:16:44.90:0,45,370	1/1:9,11:20:57.04:628,57,0	1/1:8,18:26:69:793,69,0	0/0:17,0:17:47.79:0,48,383	0/0:18,0:18:50.76:0,51,387	0/0:25,0:25:66.17:0,66,729	0/0:36,0:36:95.71:0,96,1123	0/0:7,0:7:14.04:0,14,159	0/0:19,0:19:52.15:0,52,396	0/0:29,0:29:68.77:0,69,549	0/0:18,0:18:38.84:0,39,304	1/1:4,27:31:69.06:867,69,0	0/0:30,0:30:74.88:0,75,856	0/0:23,0:23:65.58:0,66,773	0/0:9,0:9:26.90:0,27,211
chr10	94917053	.	TTC	T	363.32	PASS	AB=0.985;AC=12;AF=0.214;AN=56;BaseQRankSum=2.597;DP=642;FS=11.429;HRun=0;HaplotypeScore=132.9534;InbreedingCoeff=-0.0613;MQ=69.67;MQ0=3;MQRankSum=2.978;QD=1.51;ReadPosRankSum=2.802;VQSLOD=1.9658;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:77.95:0,78,981	0/0:11,0:11:32.98:0,33,369	0/0:29,0:16:9.35:0,9,226	0/0:19,0:14:8.11:0,8,119	0/0:32,0:32:63.25:0,63,803	0/1:31,0:31:31.15:67,0,31	0/1:26,0:26:38.96:39,0,58	0/1:28,0:28:22.75:23,0,94	0/0:23,0:23:62.02:0,62,770	0/0:25,0:25:45.28:0,45,355	0/0:20,0:20:31.22:0,31,272	0/1:26,2:28:67.27:118,0,67	0/1:24,1:25:47.74:48,0,72	0/1:13,0:13:24.36:42,0,24	0/0:18,0:18:32.40:0,32,516	0/0:24,0:24:57.07:0,57,725	0/1:15,0:15:1.74:2,0,144	0/0:15,0:15:12.21:0,12,171	0/0:25,0:25:43.19:0,43,733	0/0:37,0:37:92.49:0,92,1181	0/0:9,0:9:13.91:0,14,146	0/1:21,1:22:44.58:45,0,78	0/1:26,0:26:17.14:73,0,17	0/1:18,0:18:10.68:23,0,11	0/0:29,0:29:82.56:0,83,925	0/0:33,0:33:35.48:0,35,934	0/0:25,0:25:57.45:0,57,757	1/1:8,0:8:8.49:35,8,0
chr10	94917103	.	ACAGGATC	A	6385.52	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.464;DP=635;FS=6.172;HRun=0;HaplotypeScore=171.8213;InbreedingCoeff=0.9981;MQ=79.05;MQ0=1;MQRankSum=-13.576;QD=52.34;ReadPosRankSum=1.050;VQSLOD=4.3793;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.27:0,78,2838	1/1:2,11:13:36.11:828,36,0	0/0:16,0:16:21.04:0,21,642	0/0:18,0:18:30.10:0,30,868	1/1:7,26:33:63.04:1319,63,0	0/0:28,0:28:72.23:0,72,2605	0/0:29,0:29:72.25:0,72,2694	0/0:32,0:32:69.21:0,69,2351	1/1:8,18:26:54.16:1218,54,0	0/0:26,0:26:72.24:0,72,2663	0/0:24,0:24:63.20:0,63,2254	0/0:26,0:26:75.26:0,75,2755	0/0:26,0:26:69.22:0,69,2445	0/0:22,0:22:63.22:0,63,2331	1/1:2,11:13:36.12:849,36,0	1/1:3,15:18:42.14:1000,42,0	0/0:23,0:23:57.20:0,57,2084	0/0:15,0:15:42.14:0,42,1444	0/0:26,0:26:69.23:0,69,2481	0/0:21,0:21:54.19:0,54,2039	0/0:26,0:26:78.27:0,78,2982	0/0:28,0:28:75.26:0,75,2776	0/0:30,0:30:72.17:0,72,2510	0/0:17,0:17:33.11:0,33,1266	1/1:3,16:19:51.13:1171,51,0	0/0:24,0:24:54.19:0,54,2017	0/0:20,0:20:57.20:0,57,2188	0/0:8,0:8:21.01:0,21,619
chr10	94917485	.	G	GTCTCTC	309.62	PASS	AB=1.000;AC=9;AF=0.173;AN=52;BaseQRankSum=1.000;DP=565;FS=8.259;HRun=0;HaplotypeScore=209.7048;InbreedingCoeff=0.6933;MQ=64.88;MQ0=15;MQRankSum=-2.680;QD=3.13;ReadPosRankSum=-3.629;VQSLOD=0.7984;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:42.11:0,42,796	1/1:13,0:13:6.31:109,6,0	0/0:36,0:24:44.77:0,45,820	0/0:33,0:19:36.12:0,36,715	0/1:10,0:10:0:0,0,0	0/0:24,0:23:15.05:0,15,211	0/0:11,0:11:15.05:0,15,265	0/0:17,0:30:33.11:0,33,532	1/1:15,1:15:5.61:66,6,0	0/0:19,0:19:27.84:0,28,441	0/0:29,0:29:14.54:0,15,193	0/0:22,0:22:27.09:0,27,382	0/0:19,0:18:33.11:0,33,559	0/0:18,0:18:6.02:0,6,94	1/1:15,14:29:2.89:98,3,0	1/1:16,0:27:7.65:162,8,0	0/0:11,0:10:21.02:0,21,399	0/0:10,0:9:21.04:0,21,384	0/0:7,0:12:12.04:0,12,200	0/0:23,0:23:6.02:0,6,95	./.	0/0:23,0:23:17.27:0,17,220	0/0:13,0:13:3.01:0,3,42	0/0:23,0:22:18.06:0,18,298	./.	0/0:25,0:25:48.16:0,48,723	0/0:19,0:19:15.03:0,15,192	0/0:4,0:4:9.03:0,9,162
chr10	94917496	.	TCTCTCACACACACACACACACACACACACACACACA	T	6530.32	PASS	AB=0.822;AC=18;AF=0.333;AN=54;BaseQRankSum=3.820;DP=530;FS=21.276;HRun=0;HaplotypeScore=342.4884;InbreedingCoeff=0.3759;MQ=52.67;MQ0=21;MQRankSum=1.002;QD=28.52;ReadPosRankSum=1.351;VQSLOD=1.5732;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:42.14:0,42,2085	0/0:10,0:10:4.63:0,5,501	0/0:29,0:16:11.72:0,12,832	0/0:29,0:15:42.11:0,42,981	0/0:13,0:13:5.79:0,6,423	0/0:2,0:22:15.05:0,15,403	0/1:11,0:10:32.52:33,0,510	0/1:22,0:21:99:369,0,957	0/0:13,0:11:1.20:0,1,3	1/1:2,18:19:39.14:867,39,0	1/1:18,3:21:15.05:894,15,0	0/0:2,0:24:27.56:0,28,767	0/1:13,0:14:99:215,0,442	0/1:4,0:18:8.17:8,0,82	0/0:28,0:27:11.98:0,12,1338	0/0:26,0:24:5.74:0,6,713	0/0:16,0:14:42.14:0,42,3930	0/0:13,0:12:33.10:0,33,2604	1/1:13,0:12:17.67:206,18,0	1/1:1,22:23:6.02:523,6,0	./.	0/1:3,0:24:29.55:30,0,555	0/0:3,0:13:6.02:0,6,214	0/1:20,0:20:55.05:55,0,447	0/0:21,0:21:6.02:0,6,709	1/1:2,23:24:51.16:1917,51,0	1/1:1,15:15:15.05:1414,15,0	0/0:4,0:4:9.03:0,9,416
chr10	94917497	.	C	CA	843.09	PASS	AB=0.984;AC=25;AF=0.463;AN=54;BaseQRankSum=8.452;DP=517;FS=46.117;HRun=0;HaplotypeScore=160.9708;InbreedingCoeff=0.4409;MQ=52.99;MQ0=21;MQRankSum=-0.652;QD=3.03;ReadPosRankSum=5.178;VQSLOD=1.3440;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:42.14:0,42,587	0/0:10,0:10:5.83:0,6,153	0/0:29,0:16:47.95:0,48,639	0/0:29,0:15:42.07:0,42,545	0/0:15,0:15:8.34:0,8,71	1/1:22,0:21:10.37:33,10,0	0/1:11,0:10:4.41:38,0,4	0/1:19,0:18:81.07:128,0,81	0/0:14,0:12:3.35:0,3,12	1/1:19,0:18:28.18:217,28,0	1/1:18,0:18:9.78:43,10,0	0/1:23,0:23:15.53:16,0,27	0/1:15,1:15:21.31:83,0,21	0/1:16,1:17:2.14:2,0,5	0/0:28,0:27:9.39:0,9,100	0/0:26,0:24:5.91:0,6,57	0/0:16,0:14:42.10:0,42,563	0/0:13,0:12:33.04:0,33,419	0/1:11,0:10:72.46:72,0,74	1/1:22,0:22:2.37:8,2,0	./.	1/1:23,1:24:9.13:38,9,0	0/1:14,0:13:0:0,0,0	1/1:17,2:18:15.84:83,16,0	0/0:21,0:21:6.02:0,6,83	1/1:24,0:23:35.01:168,35,0	1/1:16,0:15:12.18:42,12,0	1/1:3,0:3:8.80:53,9,0
chr10	94917498	.	TCTC	T	1544.53	PASS	AB=1.000;AC=30;AF=0.556;AN=54;BaseQRankSum=10.442;DP=516;FS=18.495;HRun=0;HaplotypeScore=164.0764;InbreedingCoeff=0.5342;MQ=50.42;MQ0=22;MQRankSum=-0.954;QD=5.24;ReadPosRankSum=5.863;VQSLOD=1.3617;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:42.62:0,43,891	0/0:10,0:10:6.28:0,6,184	0/0:29,0:16:40.68:0,41,925	0/0:27,0:13:36.12:0,36,807	0/0:14,0:14:8.68:0,9,80	1/1:22,0:21:14.86:101,15,0	1/1:11,0:10:8.21:70,8,0	0/1:21,0:20:99:121,0,117	0/0:14,0:12:3.45:0,3,21	1/1:19,0:18:32.32:211,32,0	1/1:18,0:18:13.43:87,13,0	0/1:23,0:23:8.30:152,0,8	1/1:15,0:15:1.72:152,2,0	1/1:17,1:17:2.91:21,3,0	0/0:26,0:25:10.22:0,10,118	0/0:26,0:24:6.41:0,6,67	0/0:16,0:14:42.06:0,42,760	0/1:13,0:12:1.57:2,0,563	0/1:11,0:10:39.40:39,0,69	1/1:22,0:22:5.01:27,5,0	./.	1/1:23,1:24:17.86:127,18,0	1/1:14,0:13:2.98:21,3,0	1/1:17,2:18:17.81:132,18,0	0/0:21,0:21:5.98:0,6,60	1/1:24,0:23:42.20:294,42,0	1/1:16,0:15:14.88:104,15,0	1/1:4,0:4:8.95:71,9,0
chr10	94917500	.	TCACACACACACA	T	3103.69	PASS	AB=1.000;AC=25;AF=0.543;AN=46;BaseQRankSum=6.463;DP=524;FS=26.551;HRun=0;HaplotypeScore=205.0602;InbreedingCoeff=0.5697;MQ=50.03;MQ0=25;MQRankSum=-4.685;QD=12.22;ReadPosRankSum=3.234;VQSLOD=1.1986;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,4:27:4.32:0,4,22	0/0:9,0:9:3.01:0,3,58	./.	./.	0/0:14,0:14:8.11:0,8,111	1/1:23,0:22:15.05:416,15,0	./.	0/0:21,0:20:2.99:0,3,23	1/1:15,0:13:1.29:4,1,0	1/1:19,0:18:3.01:84,3,0	1/1:18,0:18:9.03:203,9,0	1/1:24,0:24:23.74:669,24,0	1/1:17,0:16:5.88:167,6,0	1/1:18,0:17:2.69:83,3,0	0/0:25,0:24:6.18:0,6,157	0/0:27,0:24:6:0,6,139	0/0:16,0:14:21.05:0,21,935	0/0:15,0:14:15.04:0,15,586	./.	1/1:22,0:22:6.02:125,6,0	./.	1/1:24,0:24:15.05:442,15,0	1/1:14,0:13:6.02:157,6,0	0/1:19,0:18:32.85:78,0,33	0/0:23,0:23:5.69:0,6,76	1/1:25,0:23:15.05:419,15,0	1/1:16,0:15:15.05:419,15,0	0/0:6,0:6:3.01:0,3,72
chr10	94918868	.	AAG	A	1900.74	PASS	AB=0.963;AC=19;AF=0.339;AN=56;BaseQRankSum=9.431;DP=521;FS=44.855;HRun=0;HaplotypeScore=67.8090;InbreedingCoeff=0.4497;MQ=54.91;MQ0=27;MQRankSum=-4.739;QD=8.37;ReadPosRankSum=4.186;VQSLOD=1.2309;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:57.71:0,58,825	1/1:6,8:13:33.04:345,33,0	0/0:21,0:7:9.73:0,10,102	0/1:29,0:9:3.39:3,0,54	1/1:3,26:27:59.44:496,59,0	0/1:19,1:20:61.08:61,0,151	0/0:18,0:17:32.14:0,32,228	0/0:28,0:28:22.49:0,22,468	1/1:4,12:15:24.05:278,24,0	0/1:19,0:17:31.49:31,0,230	0/1:19,0:19:3.31:3,0,182	0/0:16,0:15:27.84:0,28,190	0/0:11,0:11:7.43:0,7,121	0/0:17,0:17:25.18:0,25,207	1/1:1,13:14:24.06:273,24,0	1/1:1,8:9:21.06:240,21,0	0/0:27,0:25:24.14:0,24,351	0/0:27,0:24:38.20:0,38,538	0/1:11,4:15:30.58:31,0,183	0/0:24,0:24:20.68:0,21,302	0/0:8,0:7:5.19:0,5,49	0/0:17,1:17:37.85:0,38,274	0/0:21,0:19:26.09:0,26,289	0/0:11,0:10:13.31:0,13,91	1/1:2,11:13:24.03:266,24,0	0/0:14,0:11:15.41:0,15,198	0/1:16,0:16:53.27:53,0,154	0/1:14,0:11:10.19:10,0,93
chr10	94919240	.	GTA	G	2498.15	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.169;DP=574;FS=2.144;HRun=0;HaplotypeScore=82.5594;InbreedingCoeff=0.9978;MQ=60.55;MQ0=6;MQRankSum=-11.393;QD=29.05;ReadPosRankSum=-0.164;VQSLOD=5.0983;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.21:0,66,1103	1/1:2,4:6:18.06:235,18,0	0/0:16,0:13:30.10:0,30,496	0/0:14,0:11:27.07:0,27,414	1/1:8,14:20:33.06:362,33,0	0/0:21,0:20:54.18:0,54,919	0/0:15,0:15:33.11:0,33,551	0/0:38,0:37:99:0,99,1638	1/1:0,14:14:42.07:524,42,0	0/0:35,0:34:81.28:0,81,1384	0/0:29,0:29:75.17:0,75,1217	0/0:17,0:17:48.16:0,48,788	0/0:17,0:17:51.17:0,51,874	0/0:17,0:17:45.14:0,45,745	1/1:1,13:14:42.14:544,42,0	1/1:2,15:17:48.07:591,48,0	0/0:29,0:29:72.25:0,72,1234	0/0:15,0:15:42.14:0,42,720	0/0:19,0:16:45.14:0,45,744	0/0:28,0:28:72.25:0,72,1234	0/0:19,0:19:54.18:0,54,926	0/0:19,0:19:54.18:0,54,915	0/0:29,0:27:78.27:0,78,1330	0/0:16,0:16:42.14:0,42,720	1/1:1,12:13:33.10:429,33,0	0/0:32,0:32:90.31:0,90,1532	0/0:28,0:28:81.22:0,81,1311	0/0:13,0:13:36.12:0,36,617
chr10	94919263	.	A	AC	4164.48	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.482;DP=648;FS=3.459;HRun=4;HaplotypeScore=83.8741;InbreedingCoeff=0.9998;MQ=78.52;MQ0=0;MQRankSum=-9.806;QD=33.32;ReadPosRankSum=-0.569;VQSLOD=3.8821;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.19:0,66,748	1/1:0,12:12:30.10:410,30,0	0/0:26,0:26:40.34:0,40,657	0/0:19,0:19:38.93:0,39,445	1/1:1,27:28:48.16:655,48,0	0/0:22,0:22:60.17:0,60,680	0/0:16,0:16:45.13:0,45,510	0/0:37,0:37:90.23:0,90,1004	1/1:0,20:20:60.20:813,60,0	0/0:35,0:35:99:0,99,1123	0/0:32,0:32:96.26:0,96,1075	0/0:16,0:16:48.14:0,48,544	0/0:21,0:21:63.16:0,63,704	0/0:13,0:13:39.11:0,39,442	1/1:0,24:24:63.21:854,63,0	1/1:1,23:24:63.21:860,63,0	0/0:23,0:23:63.18:0,63,715	0/0:21,0:21:63.16:0,63,702	0/0:17,0:17:48.12:0,48,533	0/0:28,0:28:78.22:0,78,882	0/0:21,0:21:60.17:0,60,681	0/0:20,0:20:60.16:0,60,671	0/0:30,0:30:87.25:0,87,986	0/0:16,0:16:42.12:0,42,476	1/1:0,17:17:42.14:572,42,0	0/0:33,0:33:90.24:0,90,1011	0/0:37,0:37:99:0,105,1190	0/0:17,0:17:51.01:0,51,516
chr10	94919903	.	TACAC	T	3472.02	PASS	AB=1.000;AC=21;AF=0.404;AN=52;BaseQRankSum=-5.890;DP=466;FS=3.663;HRun=0;HaplotypeScore=110.6890;InbreedingCoeff=0.8929;MQ=81.08;MQ0=3;MQRankSum=-2.833;QD=23.78;ReadPosRankSum=0.141;VQSLOD=3.2595;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:78.22:0,78,1302	1/1:2,0:2:3.01:49,3,0	0/0:27,0:22:54.04:0,54,910	0/0:34,0:25:65.11:0,65,1113	./.	0/0:14,0:14:29.59:0,30,448	0/0:21,0:21:38.90:0,39,642	0/0:27,0:26:72.23:0,72,1180	1/1:9,0:9:9.02:109,9,0	0/1:16,0:16:2.14:2,0,26	1/1:16,0:16:6.36:15,6,0	0/0:14,0:14:30.10:0,30,519	0/0:10,0:10:24.86:0,25,352	0/0:13,0:13:32.10:0,32,433	1/1:8,0:8:15.05:203,15,0	1/1:8,0:8:21:256,21,0	0/0:17,0:17:39.13:0,39,709	0/0:14,0:14:36.12:0,36,585	1/1:4,15:18:34.15:623,34,0	./.	1/1:21,0:21:57.18:854,57,0	0/0:14,0:14:33.11:0,33,534	0/0:16,0:16:39.12:0,39,599	0/0:29,0:29:45.53:0,46,696	1/1:22,0:22:36.09:484,36,0	1/1:14,0:14:23.05:453,23,0	1/1:11,0:11:27.09:423,27,0	0/0:8,0:8:18.06:0,18,287
chr10	94919927	.	GA	G	132.79	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=4.694;DP=416;FS=1.427;HRun=1;HaplotypeScore=82.1088;InbreedingCoeff=0.7615;MQ=49.36;MQ0=18;MQRankSum=-3.654;QD=9.49;ReadPosRankSum=-2.541;VQSLOD=0.3738;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:40:63.24:0,63,848	./.	0/0:16,0:9:23.15:0,23,243	0/0:19,0:8:12.03:0,12,140	./.	0/0:17,0:14:24.05:0,24,273	0/0:20,0:20:27.08:0,27,356	0/0:25,0:22:60.95:0,61,707	1/1:0,1:1:3.01:39,3,0	0/0:13,0:13:36.12:0,36,469	0/0:13,0:13:33.09:0,33,403	0/0:12,0:11:21.07:0,21,277	0/0:12,0:12:22.62:0,23,276	0/0:14,0:14:35.63:0,36,408	1/1:2,1:3:6.01:79,6,0	1/1:0,1:1:2.97:20,3,0	0/0:20,0:19:43.37:0,43,563	0/0:14,0:13:33.11:0,33,421	0/0:21,0:19:52.40:0,52,664	0/0:10,0:7:3.01:0,3,39	0/0:32,0:28:42.03:0,42,544	0/0:11,0:11:15.04:0,15,191	0/0:16,0:15:18.03:0,18,204	0/0:24,0:23:21.11:0,21,262	1/1:5,4:9:9.03:120,9,0	0/0:19,0:19:54.18:0,54,731	0/0:21,0:17:29.31:0,29,376	0/0:6,0:5:9.91:0,10,114
chr10	94919958	.	AGGGAGG	A	689.70	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=-0.512;DP=394;FS=23.716;HRun=0;HaplotypeScore=76.6558;InbreedingCoeff=0.3627;MQ=42.85;MQ0=36;MQRankSum=-0.939;QD=8.96;ReadPosRankSum=-1.806;VQSLOD=0.2532;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:19.69:0,20,593	0/0:2,0:2:6.02:0,6,80	0/0:50,0:9:17.13:0,17,268	0/0:68,0:9:15.44:0,15,177	0/0:6,0:6:9.03:0,9,134	1/1:13,0:11:1.18:18,1,0	0/1:12,0:12:6.03:6,0,20	1/1:7,19:23:53.85:714,54,0	0/0:4,0:4:12.04:0,12,177	0/0:9,0:9:20.89:0,21,379	0/0:3,0:3:9.03:0,9,203	0/1:9,0:9:9.78:10,0,44	0/1:12,0:12:15.03:15,0,86	0/0:12,0:12:11.71:0,12,100	0/0:7,0:6:14.91:0,15,186	0/0:5,0:5:9.03:0,9,144	0/0:18,0:16:26.69:0,27,537	0/0:8,0:7:4.78:0,5,232	0/0:21,0:19:48.44:0,48,668	0/0:8,0:6:9.03:0,9,156	0/0:22,0:18:2.88:0,3,36	0/0:5,0:4:0:0,0,0	0/0:8,0:6:2.98:0,3,22	0/0:10,0:10:0.88:0,1,3	./.	0/0:12,0:12:35.99:0,36,571	0/0:10,0:6:8.99:0,9,284	1/1:5,0:4:7.13:58,7,0
chr10	94920056	.	GGTTTGTGGA	G	6586.78	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.932;DP=559;FS=16.671;HRun=0;HaplotypeScore=165.3978;InbreedingCoeff=0.9986;MQ=81.10;MQ0=0;MQRankSum=-12.241;QD=68.61;ReadPosRankSum=-0.172;VQSLOD=3.8046;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,5202	1/1:1,9:10:30.06:882,30,0	0/0:31,0:30:87.29:0,87,3606	0/0:37,0:32:88.57:0,89,3278	1/1:0,23:23:33.03:899,33,0	0/0:22,0:22:63.22:0,63,3049	0/0:17,0:17:51.17:0,51,2158	0/0:35,0:35:99:0,104,4148	1/1:1,14:15:30.02:831,30,0	0/0:18,0:18:54.19:0,54,2439	0/0:13,0:13:39.13:0,39,1755	0/0:13,0:13:39.13:0,39,1888	0/0:7,0:7:21.07:0,21,1062	0/0:19,0:19:57.20:0,57,2594	1/1:0,16:16:36.12:1168,36,0	1/1:0,13:13:33.58:1073,34,0	0/0:16,0:16:45.15:0,45,2048	0/0:17,0:17:51.18:0,51,2519	0/0:29,0:29:84.26:0,84,3483	0/0:19,0:19:57.18:0,57,2756	0/0:20,0:20:60.19:0,60,2765	0/0:16,0:16:48.16:0,48,2214	0/0:16,0:16:48.16:0,48,2314	0/0:24,0:24:64.09:0,64,2693	1/1:1,18:19:54.19:1733,54,0	0/0:18,0:18:51.17:0,51,2281	0/0:28,0:28:84.29:0,84,4144	0/0:9,0:9:27.09:0,27,1366
chr10	94921002	.	CT	C	2075.22	PASS	AB=0.889;AC=15;AF=0.268;AN=56;BaseQRankSum=6.749;DP=564;FS=2.369;HRun=11;HaplotypeScore=60.3449;InbreedingCoeff=0.7205;MQ=69.40;MQ0=1;MQRankSum=-1.090;QD=13.13;ReadPosRankSum=3.605;VQSLOD=3.8285;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,2:19:7.84:0,8,481	1/1:2,5:7:14.98:123,15,0	0/0:14,1:14:5.42:0,5,247	0/1:8,1:6:12.71:13,0,62	1/1:3,31:35:91.92:744,92,0	0/0:14,1:15:17.38:0,17,376	0/0:17,1:18:26.26:0,26,461	0/0:13,0:31:54.67:0,55,313	1/1:3,15:18:44.93:369,45,0	0/0:30,2:32:29.01:0,29,718	0/0:17,0:17:39.10:0,39,416	0/0:15,0:16:35.94:0,36,358	0/0:16,1:17:20.11:0,20,386	0/0:25,2:27:44.52:0,45,673	1/1:3,13:16:23.95:197,24,0	1/1:3,18:21:39.23:426,39,0	0/0:28,0:28:72.18:0,72,768	0/1:16,2:18:4.01:4,0,365	0/0:23,1:25:29.32:0,29,500	0/0:20,0:22:38.17:0,38,566	0/0:19,1:20:26.48:0,26,487	0/0:16,1:17:23.46:0,23,447	0/0:13,0:14:38.92:0,39,386	0/1:10,2:13:13.24:13,0,271	1/1:4,16:21:46.96:375,47,0	0/0:29,0:29:52.62:0,53,528	0/0:33,1:34:81.63:0,82,838	0/0:3,0:10:19.89:0,20,100
chr10	94922292	.	GT	G	2710.48	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.569;DP=599;FS=8.863;HRun=6;HaplotypeScore=59.4785;InbreedingCoeff=0.9980;MQ=75.44;MQ0=0;MQRankSum=-1.558;QD=27.94;ReadPosRankSum=3.392;VQSLOD=4.1424;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:99:0,117,1473	1/1:1,8:9:24.06:255,24,0	0/0:17,0:18:18.75:0,19,512	0/0:18,0:17:38.61:0,39,438	1/1:1,21:22:60.15:645,60,0	0/0:16,0:16:48.15:0,48,619	0/0:33,0:33:96.30:0,96,1247	0/0:32,0:32:84.25:0,84,1066	1/1:1,14:15:42.11:451,42,0	0/0:21,0:21:48.16:0,48,631	0/0:18,0:18:54.16:0,54,684	0/0:27,0:27:78.23:0,78,995	0/0:31,0:31:87.15:0,87,1061	0/0:18,0:18:54.15:0,54,688	1/1:0,18:18:54.14:580,54,0	1/1:0,18:18:48.12:516,48,0	0/0:23,0:23:54.18:0,54,711	0/0:18,0:18:51.17:0,51,671	0/0:20,0:19:51.17:0,51,671	0/0:20,0:20:60.18:0,60,774	0/0:20,0:20:60.19:0,60,787	0/0:17,0:17:48.16:0,48,631	0/0:10,0:10:30.10:0,30,394	0/0:27,0:27:75.24:0,75,986	1/1:0,15:15:42.11:451,42,0	0/0:30,0:29:78.24:0,78,1008	0/0:25,0:25:75.24:0,75,974	0/0:15,0:15:45.15:0,45,592
chr10	94923399	.	AAC	A	2291.46	PASS	AB=0.979;AC=11;AF=0.196;AN=56;BaseQRankSum=2.321;DP=675;FS=12.501;HRun=0;HaplotypeScore=107.2379;InbreedingCoeff=0.5238;MQ=74.72;MQ0=5;MQRankSum=0.767;QD=12.80;ReadPosRankSum=2.332;VQSLOD=2.9531;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:86.24:0,86,1303	0/1:4,0:4:0:0,0,0	0/0:54,0:34:61.57:0,62,644	0/0:52,0:32:54.60:0,55,684	0/0:8,0:23:1.70:0,2,24	0/0:22,0:22:16.56:0,17,764	0/0:23,0:23:19.27:0,19,747	0/0:27,0:27:66.22:0,66,1045	0/0:14,0:14:12.24:0,12,139	1/1:4,18:22:47.36:561,47,0	1/1:1,19:20:36.11:453,36,0	0/0:18,0:18:45.15:0,45,713	0/0:25,0:25:65.50:0,65,1010	0/0:15,0:15:42.14:0,42,676	0/0:12,0:16:9.15:0,9,65	0/0:9,0:21:13.39:0,13,96	0/0:34,0:33:71.02:0,71,1015	0/0:16,0:17:47.41:0,47,657	0/1:21,1:22:8.88:303,0,9	0/1:28,1:29:6.95:229,0,7	0/1:35,1:36:29.15:273,0,29	0/0:27,1:28:34.19:0,34,983	0/0:19,0:19:50.66:0,51,764	0/0:19,0:19:14.22:0,14,655	0/0:14,0:18:6.92:0,7,70	1/1:25,3:28:30.62:431,31,0	0/1:18,0:18:3.68:201,0,4	0/0:13,0:13:27.09:0,27,422
chr10	94924312	.	C	CT	3977.04	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.170;DP=611;FS=0.821;HRun=3;HaplotypeScore=88.1100;InbreedingCoeff=0.9781;MQ=88.23;MQ0=0;MQRankSum=-2.942;QD=34.89;ReadPosRankSum=2.699;VQSLOD=4.1604;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.22:0,78,921	1/1:1,8:9:21.06:262,21,0	0/0:21,0:21:51.12:0,51,587	0/0:22,0:22:57.13:0,57,654	1/1:1,21:22:57.19:740,57,0	0/0:24,0:23:69.20:0,69,815	0/0:26,0:26:78.24:0,78,936	0/0:26,0:26:69.20:0,69,818	1/1:2,22:24:64.09:810,64,0	0/0:31,0:31:87.26:0,87,1041	0/0:13,0:13:36.10:0,36,420	0/0:18,0:18:54.17:0,54,648	0/0:16,0:16:48.15:0,48,576	0/0:21,0:21:60.16:0,60,697	1/1:1,15:16:48.15:614,48,0	1/1:2,20:22:50.33:768,50,0	0/0:34,0:34:99:0,99,1172	0/0:12,0:12:30.09:0,30,359	0/0:23,0:23:57.16:0,57,673	0/0:23,0:23:66.20:0,66,791	0/0:25,0:25:75.23:0,75,899	0/0:15,0:15:39.12:0,39,465	0/0:22,0:22:60.18:0,60,720	0/0:40,0:40:99:0,117,1380	1/1:0,21:21:60.20:783,60,0	0/0:22,0:22:63.19:0,63,756	0/0:31,0:31:90.28:0,90,1079	0/0:2,0:2:6.02:0,6,72
chr10	94924636	.	T	TACACAC	1661.22	PASS	AB=0.848;AC=16;AF=0.286;AN=56;BaseQRankSum=4.672;DP=605;FS=1.481;HRun=0;HaplotypeScore=157.1417;InbreedingCoeff=0.6717;MQ=51.47;MQ0=30;MQRankSum=-5.200;QD=8.70;ReadPosRankSum=-5.104;VQSLOD=0.2038;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,13:29:0:0,0,0	0/0:9,0:9:8.81:0,9,80	0/0:36,0:13:17.83:0,18,191	0/0:41,0:12:8.59:0,9,54	0/0:23,0:23:34.28:0,34,274	0/0:13,0:9:13.29:0,13,238	0/0:32,0:31:41.67:0,42,850	0/1:34,0:34:35.43:35,0,254	0/0:22,0:22:34.61:0,35,212	1/1:19,0:26:27.09:602,27,0	1/1:9,5:14:3:28,3,0	0/0:15,0:15:12.44:0,12,436	0/0:23,0:22:2.62:0,3,396	0/0:23,0:23:26.55:0,27,399	0/0:26,0:25:34.33:0,34,186	0/0:14,0:13:17.20:0,17,166	0/0:30,0:29:48.09:0,48,839	0/0:19,0:18:33.11:0,33,654	1/1:12,0:11:3.01:59,3,0	1/1:14,0:14:3.01:72,3,0	1/1:21,0:18:9.01:167,9,0	0/0:17,0:16:6.39:0,6,338	0/0:21,0:21:30.10:0,30,582	0/0:25,0:25:21.05:0,21,376	0/0:18,0:18:22.14:0,22,152	1/1:21,0:20:41.65:615,42,0	1/1:16,0:15:13.17:255,13,0	0/0:6,0:6:2.97:0,3,20
chr10	94924666	.	C	CAGAGAGAG	2116.25	PASS	AB=1.000;AC=22;AF=0.440;AN=50;BaseQRankSum=-3.075;DP=641;FS=20.977;HRun=0;HaplotypeScore=195.2621;InbreedingCoeff=0.5289;MQ=44.14;MQ0=25;MQRankSum=0.262;QD=6.24;ReadPosRankSum=-2.001;VQSLOD=1.1760;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:27:9.03:117,9,0	0/0:7,0:7:11.97:0,12,188	./.	./.	0/1:29,0:29:0.02:0,0,0	1/1:11,0:6:3.01:71,3,0	0/1:48,0:47:8.66:538,0,9	0/1:37,0:37:0:0,0,0	0/0:24,0:24:10.79:0,11,121	1/1:30,1:30:25.79:455,26,0	1/1:15,0:15:3.01:37,3,0	1/1:23,0:23:14.22:342,14,0	1/1:24,0:23:12.98:275,13,0	1/1:25,0:25:13.72:223,14,0	0/0:35,0:33:5.61:0,6,55	0/0:17,0:16:6.02:0,6,112	0/0:31,0:30:29.39:0,29,659	0/0:26,0:25:13.30:0,13,381	0/0:7,0:5:3.01:0,3,56	0/0:11,0:13:3:0,3,26	0/0:25,0:21:12.04:0,12,225	1/1:18,0:16:3.01:52,3,0	1/1:18,0:18:6.02:161,6,0	0/0:20,8:30:3.54:0,4,18	./.	0/1:27,0:27:7.20:7,0,456	0/0:22,0:21:14.55:0,15,269	0/0:4,0:5:3.01:0,3,31
chr10	94924700	.	GAGAGAGAGAA	G	678	PASS	AB=0.955;AC=8;AF=0.143;AN=56;BaseQRankSum=4.985;DP=648;FS=42.558;HRun=0;HaplotypeScore=205.0244;InbreedingCoeff=0.1453;MQ=59.77;MQ0=25;MQRankSum=-2.918;QD=4.99;ReadPosRankSum=3.744;VQSLOD=1.4883;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:53.15:0,53,779	1/1:11,0:11:12.02:235,12,0	0/0:20,0:10:30:0,30,319	0/0:46,0:20:20.88:0,21,330	0/1:19,2:21:5.96:6,0,36	0/0:19,0:15:44.97:0,45,466	0/0:37,0:36:69.80:0,70,1877	0/0:14,0:13:36.92:0,37,348	0/1:26,0:26:7.53:148,0,8	0/0:27,0:26:64.94:0,65,1544	0/0:14,0:14:18.02:0,18,345	0/0:27,0:27:55.80:0,56,1360	0/0:29,0:29:54.11:0,54,974	0/0:27,0:27:54.27:0,54,1163	0/1:28,1:28:27.27:86,0,27	0/1:14,3:15:22.39:214,0,22	0/0:30,0:30:70.19:0,70,2114	0/0:30,0:29:79.89:0,80,1760	0/0:8,0:7:21.02:0,21,202	0/0:16,0:15:30.83:0,31,266	0/0:25,0:23:22.61:0,23,386	0/0:22,0:20:39.02:0,39,467	0/0:20,0:20:42.39:0,42,779	0/0:27,0:26:21.48:0,21,316	0/0:18,1:19:5.95:0,6,42	0/1:26,0:26:72.95:73,0,910	0/0:18,0:18:22.83:0,23,402	0/1:6,0:4:52.57:53,0,64
chr10	94924702	.	GAGAGAGAA	G	1124.49	PASS	AB=1.000;AC=14;AF=0.259;AN=54;BaseQRankSum=5.543;DP=638;FS=53.677;HRun=0;HaplotypeScore=188.2571;InbreedingCoeff=0.5408;MQ=63.58;MQ0=24;MQRankSum=-1.816;QD=6.73;ReadPosRankSum=4.724;VQSLOD=0.9164;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:38:59.07:0,59,732	1/1:2,9:11:12.04:324,12,0	0/0:23,0:13:32.07:0,32,347	0/0:47,0:21:27.79:0,28,360	1/1:7,13:20:1.42:10,1,0	0/0:19,0:15:44.97:0,45,441	0/0:36,0:35:66.68:0,67,1486	0/0:14,0:13:39.03:0,39,360	1/1:4,20:24:16.15:328,16,0	0/0:26,0:25:64.94:0,65,1260	0/0:15,0:15:20.97:0,21,300	0/0:27,0:27:55.54:0,56,1117	0/0:29,0:29:53.68:0,54,813	0/0:27,0:27:57.26:0,57,1012	1/1:5,18:22:9.03:149,9,0	1/1:13,2:14:29.63:289,30,0	0/0:29,0:29:69.28:0,69,1712	0/0:30,0:29:77.57:0,78,1418	0/0:9,0:8:23.81:0,24,204	0/0:15,0:14:30.83:0,31,254	0/1:25,0:23:26.34:26,0,294	0/0:22,0:20:39.02:0,39,440	0/0:21,0:21:45.37:0,45,677	0/0:28,0:27:24.45:0,24,295	./.	0/1:25,0:25:99:104,0,620	0/1:18,0:18:30.75:31,0,333	0/1:6,0:4:34.95:35,0,64
chr10	94924704	.	GAGAGAA	G	1232.37	PASS	AB=1.000;AC=14;AF=0.259;AN=54;BaseQRankSum=5.030;DP=628;FS=57.819;HRun=0;HaplotypeScore=173.2477;InbreedingCoeff=0.5206;MQ=67.75;MQ0=23;MQRankSum=-1.903;QD=7.61;ReadPosRankSum=4.140;VQSLOD=0.9437;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:59.40:0,59,658	1/1:9,1:10:12.04:249,12,0	0/0:26,0:16:34.25:0,34,399	0/0:49,0:23:42.10:0,42,429	1/1:18,0:18:1.26:10,1,0	0/0:18,0:15:44.97:0,45,416	0/0:35,0:34:65.78:0,66,1206	0/0:14,0:13:39.01:0,39,353	1/1:21,3:24:15.87:374,16,0	0/0:27,0:26:67.04:0,67,1033	0/0:15,0:15:20.95:0,21,245	0/0:29,0:29:61.51:0,62,968	0/0:29,0:29:53.67:0,54,700	0/0:28,0:28:59.74:0,60,873	1/1:20,2:21:8.59:186,9,0	1/1:14,1:14:32.48:297,32,0	0/0:28,0:28:64.13:0,64,1317	0/0:30,0:29:73.18:0,73,1078	0/0:9,0:8:4.66:0,5,172	0/0:12,0:11:29.72:0,30,229	0/1:25,0:23:45.37:45,0,277	0/0:21,0:19:39.02:0,39,415	0/0:20,0:20:45.37:0,45,575	0/0:25,0:24:26.90:0,27,288	./.	0/1:23,0:23:99:137,0,446	0/1:19,0:19:86.26:86,0,323	0/1:6,0:4:17.71:18,0,64
chr10	94926819	.	G	GGGGA	1437.12	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-1.282;DP=390;FS=19.514;HRun=0;HaplotypeScore=75.2818;InbreedingCoeff=0.8179;MQ=76.88;MQ0=0;MQRankSum=-0.877;QD=18.91;ReadPosRankSum=-4.678;VQSLOD=0.9035;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:48.13:0,48,1089	0/0:13,0:13:36.02:0,36,517	0/0:13,0:13:29.74:0,30,397	0/0:5,0:5:7.36:0,7,37	0/0:8,0:9:23.28:0,23,324	0/0:13,0:13:28.92:0,29,197	0/0:26,0:26:46.75:0,47,367	0/0:14,0:14:4.85:0,5,179	0/0:17,0:17:47.96:0,48,707	1/1:0,0:9:6.02:122,6,0	1/1:0,6:7:8.90:60,9,0	0/0:13,0:13:20.28:0,20,121	0/0:11,0:11:21.18:0,21,148	0/0:11,0:11:19.06:0,19,102	0/0:16,0:16:48.15:0,48,823	0/0:16,0:16:48.15:0,48,818	0/0:21,0:21:60.06:0,60,984	0/0:19,0:19:51.04:0,51,777	1/1:0,4:8:23.99:342,24,0	1/1:2,7:11:20.86:262,21,0	1/1:1,8:11:3.01:80,3,0	0/0:15,0:15:15.21:0,15,206	0/0:12,0:12:17.13:0,17,162	0/0:27,0:27:60.69:0,61,380	0/0:14,0:14:39.12:0,39,636	1/1:0,8:9:27.03:549,27,0	1/1:0,12:14:8.96:199,9,0	0/1:7,0:7:3.62:4,0,18
chr10	94926976	.	GTCTAAT	G	4229.65	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.330;DP=607;FS=6.614;HRun=0;HaplotypeScore=180.6613;InbreedingCoeff=0.9752;MQ=83.55;MQ0=0;MQRankSum=-12.099;QD=64.09;ReadPosRankSum=2.229;VQSLOD=5.0189;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,4206	0/0:9,0:9:27.09:0,27,936	0/0:29,0:29:78.27:0,78,2403	0/0:20,0:20:60.20:0,60,1724	0/0:22,0:22:66.23:0,66,2407	0/0:29,0:29:87.30:0,87,3126	0/0:31,0:31:84.29:0,84,2980	0/0:36,0:35:99:0,105,3590	0/0:25,0:25:69.24:0,69,2398	1/1:0,11:11:33.11:791,33,0	1/1:0,6:8:18.06:389,18,0	0/0:27,0:27:81.28:0,81,2786	0/0:15,0:15:42.14:0,42,1534	0/0:25,0:25:75.26:0,75,2739	0/0:26,0:26:78.27:0,78,2859	0/0:21,0:21:63.22:0,63,2259	0/0:37,0:37:99:0,108,3929	0/0:34,0:34:99:0,99,3533	1/1:1,4:5:15.05:332,15,0	1/1:1,6:7:21.07:489,21,0	1/1:3,8:11:24.08:517,24,0	0/0:22,0:22:63.22:0,63,2293	0/0:24,0:24:69.24:0,69,2477	0/0:38,0:38:99:0,114,4037	0/0:26,0:26:78.27:0,78,2639	1/1:0,14:15:45.15:1065,45,0	1/1:0,9:9:27.09:647,27,0	0/0:2,0:2:6.02:0,6,220
chr10	94926986	.	CGCTGCCT	C	4387.67	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.348;DP=588;FS=6.845;HRun=0;HaplotypeScore=180.3350;InbreedingCoeff=0.9701;MQ=80.69;MQ0=0;MQRankSum=-12.187;QD=73.13;ReadPosRankSum=1.943;VQSLOD=4.6238;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,3919	0/0:8,0:8:24.08:0,24,983	0/0:20,0:20:60.15:0,60,2008	0/0:20,0:20:54.19:0,54,1911	0/0:24,0:24:69.23:0,69,2824	0/0:29,0:29:87.27:0,87,3434	0/0:27,0:27:75.24:0,75,2973	0/0:34,0:33:96.31:0,96,3696	0/0:24,0:24:72.25:0,72,2938	1/1:0,11:11:33.11:865,33,0	1/1:1,6:7:15.52:362,16,0	0/0:28,0:28:84.29:0,84,3332	0/0:18,0:18:54.15:0,54,2011	0/0:29,0:29:84.27:0,84,3228	0/0:26,0:26:78.27:0,78,3122	0/0:19,0:19:57.18:0,57,2188	0/0:38,0:38:99:0,114,4589	0/0:37,0:37:99:0,105,4196	1/1:0,4:4:12.04:317,12,0	1/1:0,6:6:18.06:469,18,0	1/1:0,8:8:21.07:500,21,0	0/0:25,0:25:72.25:0,72,2817	0/0:27,0:27:78.25:0,78,2996	0/0:36,0:36:99:0,105,4192	0/0:20,0:20:57.18:0,57,2238	1/1:0,15:15:45.15:1167,45,0	1/1:1,8:9:27.09:706,27,0	0/0:2,0:2:6.02:0,6,246
chr10	94928876	.	ATGTG	A	4386.34	PASS	AB=0.767;AC=29;AF=0.518;AN=56;BaseQRankSum=5.635;DP=803;FS=0.476;HRun=0;HaplotypeScore=246.7198;InbreedingCoeff=0.0945;MQ=49.78;MQ0=13;MQRankSum=-0.521;QD=8.81;ReadPosRankSum=5.728;VQSLOD=3.4282;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:51.16:0,51,1212	1/1:5,5:9:3:53,3,0	0/0:53,0:17:38.71:0,39,810	0/0:69,0:32:63.19:0,63,1411	0/1:8,10:19:26.70:146,0,27	0/1:14,9:23:0.11:245,0,0	1/1:16,25:40:42.07:705,42,0	1/1:5,10:14:30.10:526,30,0	0/1:9,10:19:52.09:245,0,52	0/1:32,0:32:57.09:57,0,239	1/1:23,0:23:2.34:25,2,0	1/1:19,13:32:23:376,23,0	1/1:14,12:25:37.12:591,37,0	1/1:12,13:24:17.71:315,18,0	0/1:13,21:32:35.70:342,0,36	0/0:5,5:10:7.57:0,8,121	0/0:32,0:33:71.21:0,71,2060	0/0:33,0:32:90.24:0,90,2133	0/1:16,0:15:1.40:1,0,23	0/1:22,0:22:21.65:41,0,22	0/0:73,0:70:6.62:0,7,221	0/1:15,16:31:0.13:0,0,0	1/1:7,7:14:2.54:52,3,0	0/1:9,17:26:7.43:242,0,7	0/1:9,18:27:23.80:245,0,24	0/1:20,0:32:49.86:50,0,384	0/1:24,0:24:33.47:33,0,50	0/1:3,2:5:31.86:96,0,32
chr10	94928877	.	TGTGTGTGTGTGTGCAC	T	1709.72	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=2.130;DP=806;FS=19.137;HRun=0;HaplotypeScore=350.6594;InbreedingCoeff=0.5775;MQ=48.85;MQ0=13;MQRankSum=-2.054;QD=6.04;ReadPosRankSum=-1.782;VQSLOD=0.6739;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:51.17:0,51,2033	0/0:9,0:8:3.81:0,4,18	0/0:54,0:17:33.01:0,33,516	0/0:67,0:30:58.28:0,58,936	0/0:19,0:19:10.78:0,11,161	0/0:22,0:22:17.61:0,18,197	0/0:40,0:39:28.76:0,29,375	0/0:15,0:14:20.37:0,20,157	0/0:19,0:19:12.73:0,13,354	0/1:32,0:32:44.06:334,0,44	1/1:25,0:25:2.22:39,2,0	0/0:32,0:32:20.52:0,21,305	0/1:26,0:25:75.66:76,0,587	0/0:25,0:24:16.56:0,17,152	0/0:35,0:32:23.69:0,24,463	0/0:11,0:10:7.75:0,8,163	0/0:35,0:35:83.88:0,84,3639	0/0:34,0:33:86.01:0,86,4392	1/1:15,0:14:6.02:99,6,0	1/1:4,18:22:11.71:219,12,0	1/1:76,0:73:1.84:74,2,0	0/1:31,0:31:0.26:0,0,1	0/0:14,0:14:2.21:0,2,18	0/0:26,0:26:16.33:0,16,435	0/0:28,0:27:17.71:0,18,245	1/1:32,1:33:35.47:823,35,0	1/1:8,15:23:9.39:210,9,0	0/0:5,0:5:9.03:0,9,280
chr10	94928883	.	TGTGTGTGCAC	T	2196.30	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=3.458;DP=790;FS=39.909;HRun=0;HaplotypeScore=290.0209;InbreedingCoeff=0.0755;MQ=47.31;MQ0=15;MQRankSum=-2.987;QD=6.02;ReadPosRankSum=-2.844;VQSLOD=1.1718;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:54.18:0,54,1595	0/0:10,0:9:3.40:0,3,18	0/0:53,0:17:33.09:0,33,425	0/0:62,0:26:58.28:0,58,798	0/1:20,0:20:25.17:25,0,39	0/0:19,0:21:17.07:0,17,120	0/1:42,0:41:15.19:15,0,178	0/1:21,0:19:17.39:17,0,342	0/0:19,0:19:12.20:0,12,130	1/1:10,23:33:47.77:1023,48,0	1/1:5,20:24:2.59:77,3,0	0/0:28,0:32:15.47:0,15,162	0/1:25,0:26:99:218,0,273	0/1:22,0:22:28.68:29,0,84	0/0:35,0:32:7.54:0,8,162	0/1:12,0:11:24.41:28,0,24	0/0:36,0:36:86.92:0,87,2815	0/0:35,0:34:97.41:0,97,3468	0/1:8,0:7:7.68:90,0,8	1/1:22,0:22:7.18:139,7,0	0/0:70,0:68:6.32:0,6,45	0/1:30,0:30:0.02:1,0,0	0/0:14,0:14:2.18:0,2,18	0/1:26,0:27:43.35:43,0,175	0/1:26,0:25:6.21:6,0,112	0/1:31,0:31:6.93:537,0,7	1/1:18,0:18:4.80:111,5,0	0/0:4,0:4:9.03:0,9,150
chr10	94928893	.	C	CGT	845.73	PASS	AB=0.952;AC=33;AF=0.589;AN=56;BaseQRankSum=1.299;DP=782;FS=0.805;HRun=0;HaplotypeScore=244.6343;InbreedingCoeff=0.3035;MQ=42.53;MQ0=16;MQRankSum=0.039;QD=1.57;ReadPosRankSum=-5.234;VQSLOD=1.4898;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,17:35:75.85:76,0,76	1/1:12,0:11:5.99:50,6,0	0/0:43,0:11:3.01:0,3,31	0/0:52,0:20:2.99:0,3,23	1/1:19,0:19:2.87:22,3,0	1/1:20,0:20:5.82:18,6,0	1/1:47,0:46:11.96:121,12,0	1/1:24,0:22:5.44:39,5,0	0/1:20,0:20:7.20:39,0,7	0/1:26,0:26:18.29:58,0,18	0/0:23,0:22:2.42:0,2,13	1/1:31,0:31:6.93:59,7,0	1/1:29,0:28:12.50:155,13,0	1/1:24,0:23:4.21:56,4,0	1/1:33,0:30:6.97:87,7,0	1/1:15,0:14:1.43:58,1,0	0/0:29,0:37:40.60:0,41,380	0/0:36,0:36:48.14:0,48,619	0/0:9,0:8:4.84:0,5,29	0/0:22,0:22:3.54:0,4,18	0/1:72,0:68:6.15:6,0,18	0/1:26,0:26:0:1,0,0	0/1:16,0:16:0:0,0,0	1/1:32,0:32:6.38:53,6,0	1/1:27,0:27:6:59,6,0	0/1:27,0:27:4.61:5,0,83	0/0:19,0:19:8.27:0,8,49	1/1:3,0:3:3.01:45,3,0
chr10	94929014	.	GCTAA	G	3157.79	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.397;DP=575;FS=7.869;HRun=0;HaplotypeScore=112.7776;InbreedingCoeff=0.9955;MQ=82.54;MQ0=0;MQRankSum=-3.251;QD=38.51;ReadPosRankSum=4.205;VQSLOD=3.7962;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,2841	1/1:0,6:6:18.06:348,18,0	0/0:22,0:21:54.18:0,54,1274	0/0:22,0:22:61.99:0,62,1434	1/1:2,12:14:27.09:523,27,0	0/0:19,0:19:54.06:0,54,1350	0/0:23,0:23:69.11:0,69,1694	0/0:26,0:26:75.25:0,75,1930	1/1:0,9:9:18.06:349,18,0	0/0:24,0:24:66.23:0,66,1777	0/0:16,0:16:42.14:0,42,1135	0/0:16,0:16:45.03:0,45,1103	0/0:17,0:17:48.16:0,48,1256	0/0:26,0:25:75.12:0,75,1900	1/1:0,23:23:57.20:1099,57,0	1/1:0,12:12:30.10:581,30,0	0/0:27,0:27:78.27:0,78,2121	0/0:19,0:19:54.18:0,54,1425	0/0:20,0:20:56.78:0,57,1455	0/0:16,0:16:45.15:0,45,1148	0/0:34,0:34:84.04:0,84,2238	0/0:18,0:18:50.84:0,51,1319	0/0:10,0:10:30.10:0,30,820	0/0:37,0:37:96.21:0,96,2441	1/1:1,17:18:24.08:445,24,0	0/0:37,0:37:99:0,111,2871	0/0:17,0:17:51.12:0,51,1334	0/0:8,0:8:24.08:0,24,657
chr10	94929157	.	T	TGCGCGC	1505.93	PASS	AB=0.792;AC=25;AF=0.446;AN=56;BaseQRankSum=1.454;DP=605;FS=11.974;HRun=0;HaplotypeScore=146.5759;InbreedingCoeff=0.6656;MQ=71.24;MQ0=11;MQRankSum=-6.020;QD=6.00;ReadPosRankSum=-1.146;VQSLOD=2.0020;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:54.18:0,54,1139	1/1:5,0:5:9:97,9,0	0/0:38,0:25:67.20:0,67,1295	0/0:35,0:27:77.34:0,77,1440	1/1:13,0:12:3.01:74,3,0	1/1:10,14:24:5.71:162,6,0	0/1:21,20:40:0.08:0,0,1	1/1:9,0:9:17.97:236,18,0	1/1:8,0:17:8.70:236,9,0	0/0:2,0:15:39.05:0,39,647	0/0:16,0:16:36.12:0,36,695	1/1:4,0:15:5.95:106,6,0	1/1:4,0:15:12.02:236,12,0	0/0:3,1:19:0:0,0,0	1/1:5,0:25:7.80:154,8,0	1/1:6,0:23:2.70:89,3,0	0/0:42,0:41:73.13:0,73,1552	0/0:28,0:27:15.65:0,16,632	0/0:20,0:18:24.33:0,24,779	0/0:21,0:21:21.06:0,21,376	0/0:28,0:28:44.91:0,45,839	0/0:14,9:26:0.94:0,1,3	0/0:4,8:12:0.05:0,0,1	1/1:9,0:22:3.48:91,3,0	0/1:9,6:13:0:0,0,0	0/0:18,0:18:5.10:0,5,597	0/1:18,0:18:1.43:1,0,433	1/1:5,1:6:6.02:198,6,0
chr10	94930759	.	T	TTC	9772.01	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-14.909;DP=759;FS=0.310;HRun=0;HaplotypeScore=83.2629;InbreedingCoeff=0.9985;MQ=92.47;MQ0=0;MQRankSum=-2.440;QD=51.43;ReadPosRankSum=1.026;VQSLOD=5.6943;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,169,2347	0/0:16,0:16:45.15:0,45,645	0/0:37,0:37:99:0,99,1343	0/0:25,0:25:63.13:0,63,840	0/0:21,0:21:63.21:0,63,903	0/0:12,0:12:36.12:0,36,516	0/0:25,0:25:66.22:0,66,945	0/0:29,0:29:78.25:0,78,1101	0/0:26,0:26:75.25:0,75,1074	1/1:1,41:42:99:2286,126,0	1/1:1,16:17:48.16:880,48,0	0/0:30,0:30:84.28:0,84,1204	0/0:37,0:37:99:0,108,1548	0/0:27,0:27:72.24:0,72,1031	0/0:29,0:29:81.27:0,81,1160	0/0:35,0:35:99:0,99,1418	0/0:27,0:27:78.25:0,78,1100	0/0:14,0:14:36.12:0,36,514	1/1:4,23:27:72.25:1320,72,0	1/1:1,27:28:81.28:1447,81,0	1/1:0,31:31:84.29:1539,84,0	0/0:23,0:23:69.23:0,69,989	0/0:23,0:23:66.20:0,66,911	0/0:43,0:43:99:0,129,1849	0/0:28,0:28:81.23:0,81,1106	1/1:1,28:29:81.28:1475,81,0	1/1:1,15:16:45.15:825,45,0	0/0:6,0:6:18.06:0,18,258
chr10	94931486	.	A	AACAC	11841.07	PASS	AB=0.940;AC=39;AF=0.722;AN=54;BaseQRankSum=2.787;DP=904;FS=0.347;HRun=0;HaplotypeScore=330.6966;InbreedingCoeff=0.3072;MQ=57.76;MQ0=9;MQRankSum=-2.847;QD=15.77;ReadPosRankSum=-3.156;VQSLOD=3.2165;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:49:99:0,111,1734	1/1:9,0:17:23.11:131,23,0	0/1:54,0:26:35.03:35,0,254	0/1:53,0:30:85.35:85,0,148	1/1:20,0:43:5.57:253,6,0	1/1:11,13:26:36.25:908,36,0	1/1:9,13:28:41.55:897,42,0	1/1:30,13:43:56.24:983,56,0	1/1:12,0:33:32.44:267,32,0	0/1:41,0:40:99:116,0,1007	0/0:32,0:32:4.75:0,5,601	1/1:7,15:24:41.88:938,42,0	1/1:10,17:29:54.18:1287,54,0	1/1:13,14:30:47.12:918,47,0	1/1:10,0:37:19.56:269,20,0	0/1:14,0:43:18.11:277,0,18	0/0:43,0:44:99:0,105,1626	0/0:19,0:19:53.77:0,54,858	0/1:7,0:16:26.65:27,0,112	1/1:16,0:31:21.32:125,21,0	./.	1/1:18,13:31:28.50:726,29,0	1/1:15,12:28:29.33:491,29,0	1/1:14,34:52:99:2233,101,0	1/1:21,0:47:15.66:315,16,0	0/1:11,0:18:99:109,0,128	0/1:10,0:12:78.31:79,0,78	1/1:3,4:9:23.51:374,24,0
chr10	94931546	.	C	CAT	1452.27	PASS	AB=0.994;AC=18;AF=0.321;AN=56;BaseQRankSum=11.437;DP=854;FS=64.997;HRun=0;HaplotypeScore=324.4859;InbreedingCoeff=-0.1884;MQ=34.96;MQ0=21;MQRankSum=-7.909;QD=2.92;ReadPosRankSum=-1.419;VQSLOD=0.2773;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:36.79:0,37,692	0/0:16,0:16:20.63:0,21,322	0/0:56,0:4:9.03:0,9,132	0/0:42,0:8:9.22:0,9,123	0/1:43,0:41:97.05:97,0,239	0/1:26,0:26:20.75:21,0,376	0/1:27,0:27:10.64:11,0,111	0/0:30,0:28:37.31:0,37,780	0/0:34,0:33:22.17:0,22,390	0/1:39,4:42:99:537,0,217	1/1:30,0:30:12.11:102,12,0	0/0:25,0:25:25.48:0,25,334	0/0:25,0:25:11.07:0,11,297	0/1:35,0:35:56.18:56,0,216	0/1:35,0:32:5.58:6,0,404	0/0:46,0:44:32.28:0,32,905	0/0:27,0:27:41.62:0,42,674	0/0:14,0:14:28.08:0,28,403	0/1:15,0:13:36.76:167,0,37	1/1:42,2:43:2.51:68,3,0	0/1:5,0:5:10.57:11,0,14	0/1:44,0:43:25.74:26,0,164	0/1:31,0:31:44.48:44,0,46	0/1:29,0:29:9.17:9,0,287	0/1:45,0:46:19.98:20,0,581	0/1:27,0:27:99:297,0,214	0/1:17,0:17:59.60:144,0,60	0/0:7,0:7:8.10:0,8,150
chr10	94931550	.	C	CA	3842.61	PASS	AB=0.873;AC=29;AF=0.518;AN=56;BaseQRankSum=11.601;DP=798;FS=84.499;HRun=1;HaplotypeScore=291.5690;InbreedingCoeff=-0.6587;MQ=32.65;MQ0=19;MQRankSum=-7.421;QD=5.37;ReadPosRankSum=-1.165;VQSLOD=-0.0214;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,1:31:33.07:33,0,509	0/1:15,0:15:99:109,0,199	0/0:48,0:3:9.03:0,9,118	0/0:33,1:4:5.51:0,6,46	0/1:34,6:40:76.34:76,0,169	0/1:23,2:25:99:108,0,283	0/1:22,3:25:43.21:43,0,89	0/1:24,0:22:61.38:61,0,600	0/1:32,0:31:18.39:18,0,280	0/1:20,12:41:99:824,0,115	1/1:10,4:28:22.76:217,23,0	0/1:20,3:23:4.79:5,0,233	0/1:20,3:23:32.59:33,0,194	0/1:22,12:34:91.82:92,0,189	0/1:33,0:30:78.53:79,0,272	0/1:45,0:43:79.64:80,0,721	0/1:25,1:26:99:137,0,481	0/1:12,0:12:12.58:13,0,322	0/1:10,2:10:30.68:292,0,31	1/1:24,6:42:26.17:332,26,0	1/1:1,0:5:3:28,3,0	0/1:30,8:42:77.39:77,0,79	0/1:23,5:31:7.65:85,0,8	0/1:27,0:27:22.60:23,0,197	0/1:31,6:45:99:227,0,372	0/1:12,11:27:99:462,0,170	0/1:6,4:17:58.97:273,0,59	0/1:6,1:7:95.81:118,0,96
chr10	94936703	.	A	AC	1386.64	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=9.219;DP=584;FS=10.825;HRun=0;HaplotypeScore=177.2110;InbreedingCoeff=0.9567;MQ=56.26;MQ0=22;MQRankSum=-7.475;QD=6.11;ReadPosRankSum=6.141;VQSLOD=2.5876;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:75.74:0,76,657	1/1:5,0:5:5.86:30,6,0	0/0:61,0:17:31.14:0,31,246	0/0:64,0:21:17.19:0,17,128	1/1:17,2:15:18.03:88,18,0	0/0:12,0:12:35.95:0,36,320	0/0:16,0:16:36.05:0,36,348	0/0:27,0:26:54.77:0,55,441	1/1:20,0:19:25.08:82,25,0	1/1:17,0:17:41.08:197,41,0	1/1:13,1:13:16.48:60,16,0	0/0:16,0:16:20.24:0,20,177	0/0:17,0:17:41.89:0,42,391	0/0:17,0:16:24.03:0,24,225	1/1:21,0:21:38.87:157,39,0	1/1:26,0:26:51.44:197,51,0	0/0:26,0:26:65.35:0,65,626	0/0:20,0:20:50.46:0,50,462	1/1:25,0:24:59.77:344,60,0	1/1:15,4:18:23.66:105,24,0	1/1:15,1:16:6.22:54,6,0	0/0:13,0:13:15.48:0,15,228	0/0:9,0:8:14.96:0,15,138	0/0:13,0:13:23.87:0,24,226	1/1:10,0:10:12.99:48,13,0	1/1:17,1:16:19.78:100,20,0	1/1:17,0:17:30.15:150,30,0	0/0:11,0:11:25.67:0,26,195
chr10	94936710	.	AAATC	A	10806.50	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=3.133;DP=562;FS=16.870;HRun=0;HaplotypeScore=162.3986;InbreedingCoeff=0.2419;MQ=54.23;MQ0=19;MQRankSum=-6.563;QD=21.61;ReadPosRankSum=2.022;VQSLOD=3.7518;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:99:199,0,167	1/1:4,0:4:12.03:163,12,0	0/0:62,0:14:27.19:0,27,278	0/1:61,0:20:54.07:54,0,98	1/1:20,0:16:47.91:597,48,0	1/1:11,0:11:30.03:353,30,0	1/1:9,6:15:30.08:422,30,0	1/1:25,0:24:60.33:666,60,0	1/1:21,0:20:60.08:834,60,0	1/1:14,0:14:38.89:522,39,0	1/1:13,0:12:36.08:498,36,0	1/1:14,1:15:14.79:180,15,0	1/1:17,0:17:37.74:415,38,0	1/1:5,12:16:18.06:272,18,0	1/1:21,0:21:56.81:678,57,0	1/1:25,0:25:75.02:979,75,0	0/1:24,0:24:25.45:25,0,294	0/1:18,0:18:30.46:30,0,173	1/1:25,0:24:32.92:514,33,0	1/1:16,0:15:39.59:553,40,0	1/1:16,0:16:30.41:421,30,0	1/1:10,1:11:21.44:249,21,0	1/1:9,0:8:14.86:152,15,0	1/1:15,0:15:24.22:312,24,0	1/1:9,0:9:24.07:344,24,0	1/1:16,0:14:39.11:528,39,0	1/1:17,0:17:36.07:513,36,0	1/1:11,0:11:30.32:332,30,0
chr10	94936711	.	AAT	A	7767.21	PASS	AB=0.989;AC=50;AF=0.893;AN=56;BaseQRankSum=3.455;DP=550;FS=25.949;HRun=0;HaplotypeScore=154.2411;InbreedingCoeff=0.2292;MQ=54.93;MQ0=19;MQRankSum=-6.359;QD=15.98;ReadPosRankSum=2.981;VQSLOD=2.8068;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:33,1:34:69.02:229,0,69	1/1:1,3:4:11.95:120,12,0	0/0:63,0:14:24.63:0,25,189	0/1:61,0:21:3.53:4,0,119	1/1:6,13:16:47.88:490,48,0	1/1:10,1:11:0.39:112,0,0	1/1:12,2:15:23.89:135,24,0	1/1:19,7:25:58.31:459,58,0	1/1:2,19:20:60.02:654,60,0	1/1:0,13:13:39.11:452,39,0	1/1:3,10:12:35.99:381,36,0	1/1:6,0:15:2.48:25,2,0	1/1:15,0:16:24.01:177,24,0	1/1:14,1:16:16.01:82,16,0	1/1:1,20:21:57.03:620,57,0	1/1:3,22:25:75:819,75,0	0/1:24,0:24:73.37:73,0,119	0/1:18,0:18:84.11:84,0,90	1/1:3,15:17:34.17:504,34,0	1/1:2,14:15:41.96:436,42,0	1/1:7,9:16:26.39:334,26,0	1/1:11,0:11:0.54:74,1,0	1/1:7,2:8:13.61:90,14,0	1/1:16,0:16:20.33:107,20,0	1/1:2,6:8:23.98:257,24,0	1/1:4,11:13:38.91:398,39,0	1/1:1,11:12:36.10:414,36,0	1/1:6,5:11:24.17:236,24,0
chr10	94936712	.	AT	A	5622.36	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.742;DP=545;FS=29.132;HRun=1;HaplotypeScore=154.9815;InbreedingCoeff=0.8167;MQ=56.05;MQ0=19;MQRankSum=-4.210;QD=13.35;ReadPosRankSum=2.996;VQSLOD=2.4891;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:34:74.28:524,74,0	1/1:4,0:4:11.58:62,12,0	0/0:62,1:14:14.98:0,15,150	0/0:56,0:21:5.09:0,5,128	1/1:18,1:15:44.01:231,44,0	1/1:7,2:11:26.26:178,26,0	1/1:9,6:15:24.66:207,25,0	1/1:19,1:25:60.32:373,60,0	1/1:21,0:20:57.96:312,58,0	1/1:13,0:13:37.69:207,38,0	1/1:12,1:12:34.68:186,35,0	1/1:11,3:14:12.83:73,13,0	1/1:11,3:16:37.83:249,38,0	1/1:15,1:16:17.44:125,17,0	1/1:21,0:21:55.11:303,55,0	1/1:25,0:25:72.61:398,73,0	1/1:22,2:24:9.52:243,10,0	1/1:17,1:18:7.65:170,8,0	1/1:18,0:17:32.77:238,33,0	1/1:15,0:14:37.68:204,38,0	1/1:16,0:16:36.50:195,37,0	1/1:6,2:10:19.64:149,20,0	1/1:3,6:8:14.86:120,15,0	1/1:0,7:16:23.36:182,23,0	1/1:8,0:8:23.17:124,23,0	1/1:15,0:13:37.61:207,38,0	1/1:12,0:12:34.80:189,35,0	1/1:11,0:11:28.56:173,29,0
chr10	94936714	.	CAA	C	4294.55	PASS	AB=0.834;AC=41;AF=0.732;AN=56;BaseQRankSum=10.028;DP=559;FS=39.589;HRun=14;HaplotypeScore=169.6523;InbreedingCoeff=0.5524;MQ=56.88;MQ0=20;MQRankSum=-8.265;QD=12.06;ReadPosRankSum=7.656;VQSLOD=-0.1952;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:86.59:0,87,754	1/1:1,3:4:11.97:96,12,0	0/0:67,0:16:22.26:0,22,197	0/0:56,1:19:20.08:0,20,149	1/1:7,11:15:38.71:297,39,0	0/1:9,0:11:3.57:35,0,4	1/1:7,0:15:23.92:85,24,0	0/1:20,0:25:11.42:49,0,11	1/1:5,17:21:55.86:465,56,0	1/1:3,11:14:32.90:274,33,0	1/1:3,11:13:35.10:276,35,0	1/1:12,0:14:5.27:15,5,0	1/1:14,0:16:12.46:47,12,0	0/1:16,0:17:5.51:27,0,6	1/1:9,12:21:41.81:337,42,0	1/1:8,19:27:67.74:559,68,0	0/0:25,0:25:62.96:0,63,685	0/0:17,0:17:34.67:0,35,377	1/1:8,10:17:13.25:251,13,0	1/1:2,13:14:38.93:319,39,0	1/1:7,9:16:28.32:243,28,0	0/1:9,0:11:8.16:8,0,36	1/1:7,1:8:4.59:30,5,0	1/1:10,0:16:15.98:55,16,0	1/1:2,6:8:23.96:196,24,0	1/1:5,10:13:38.85:314,39,0	1/1:5,10:15:33.48:275,33,0	0/1:9,0:13:40.18:40,0,61
chr10	94936717	.	A	AC	1896.47	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=10.734;DP=591;FS=28.211;HRun=0;HaplotypeScore=184.5868;InbreedingCoeff=0.5227;MQ=57.36;MQ0=18;MQRankSum=-6.415;QD=5.53;ReadPosRankSum=6.297;VQSLOD=1.4781;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.33:0,96,698	1/1:3,1:4:7.98:35,8,0	0/0:70,0:18:20.51:0,21,210	0/0:58,0:19:25.10:0,25,184	1/1:18,2:17:24.19:125,24,0	0/1:11,0:11:44.38:69,0,44	1/1:16,0:16:13.29:74,13,0	0/0:29,0:28:50.62:0,51,328	1/1:20,3:22:32.37:157,32,0	1/1:17,0:17:35.71:171,36,0	1/1:15,1:15:5.76:62,6,0	0/1:15,0:15:15.25:15,0,20	0/1:17,0:17:19.59:20,0,146	1/1:18,0:17:5.69:46,6,0	1/1:19,1:20:27.80:178,28,0	1/1:26,4:30:65.31:335,65,0	0/0:24,0:24:64.46:0,64,704	0/0:19,0:19:44.99:0,45,502	1/1:20,2:21:16.75:170,17,0	1/1:17,1:17:30.13:111,30,0	1/1:14,2:16:30.50:135,31,0	0/1:10,0:10:29.33:29,0,55	0/1:10,0:10:15.92:16,0,60	1/1:16,1:17:4.83:69,5,0	1/1:9,1:10:2.65:44,3,0	1/1:14,3:15:32.12:131,32,0	1/1:14,1:16:27.39:101,27,0	0/0:13,0:13:30.12:0,30,130
chr10	94936720	.	A	AC	2104.17	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=11.259;DP=613;FS=64.430;HRun=0;HaplotypeScore=186.1648;InbreedingCoeff=0.9565;MQ=60.14;MQ0=17;MQRankSum=-7.599;QD=8.52;ReadPosRankSum=8.455;VQSLOD=0.9720;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,717	1/1:4,1:5:10.66:56,11,0	0/0:72,0:21:22.22:0,22,244	0/0:56,0:19:19.51:0,20,225	1/1:19,2:18:20.12:185,20,0	0/0:13,0:13:36:0,36,260	0/0:16,0:16:32.74:0,33,244	0/0:30,0:29:68.34:0,68,529	1/1:21,3:23:43.33:265,43,0	1/1:19,0:19:35.86:186,36,0	1/1:18,1:18:8.59:133,9,0	0/0:14,0:14:15.98:0,16,106	0/0:18,0:18:39.67:0,40,305	0/0:18,0:17:20.88:0,21,156	1/1:19,1:20:12.24:153,12,0	1/1:27,4:31:45.99:289,46,0	0/0:24,0:24:61.62:0,62,692	0/0:19,0:19:45:0,45,504	1/1:22,2:23:5.19:167,5,0	1/1:18,1:18:43.29:217,43,0	1/1:13,2:15:14.41:131,14,0	0/0:10,0:10:23.80:0,24,187	0/0:10,0:10:20.80:0,21,152	0/0:17,0:17:26.27:0,26,194	1/1:10,1:11:24.26:118,24,0	1/1:18,3:19:43.58:235,44,0	1/1:17,1:18:29.92:195,30,0	0/0:13,0:13:38.65:0,39,278
chr10	94937500	.	C	CG	20041.28	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-5.466;DP=633;FS=20.664;HRun=1;HaplotypeScore=85.4683;InbreedingCoeff=0.9980;MQ=62.87;MQ0=1;MQRankSum=-4.244;QD=39.45;ReadPosRankSum=2.432;VQSLOD=3.0257;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.10:0,93,1142	1/1:2,12:14:33.08:469,33,0	0/0:20,0:18:22.21:0,22,462	0/0:18,0:16:27.03:0,27,259	1/1:0,31:31:84.28:1231,84,0	1/1:1,18:19:51.17:761,51,0	1/1:1,22:23:57.19:850,57,0	1/1:4,16:20:51.17:758,51,0	1/1:2,18:20:60.16:865,60,0	1/1:1,31:32:90.26:1312,90,0	1/1:2,23:25:72.24:1068,72,0	1/1:1,20:21:54.18:800,54,0	1/1:0,21:21:60.20:887,60,0	1/1:2,18:20:57.11:793,57,0	1/1:0,23:23:63.21:939,63,0	1/1:3,17:20:51.13:735,51,0	0/0:31,0:31:84.21:0,84,1089	0/0:21,0:21:60.10:0,60,725	1/1:0,14:14:42.09:583,42,0	1/1:1,17:18:42.14:628,42,0	1/1:0,27:27:66.22:986,66,0	1/1:2,21:23:63.13:912,63,0	1/1:3,17:19:51.17:758,51,0	1/1:0,16:16:45.15:673,45,0	1/1:3,25:28:75.21:1098,75,0	1/1:1,28:29:81.25:1189,81,0	1/1:0,36:37:96.32:1430,96,0	1/1:0,7:7:21.07:314,21,0
chr10	94937725	.	A	AG	7207.40	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=1.611;DP=386;FS=34.154;HRun=2;HaplotypeScore=217.3621;InbreedingCoeff=0.9547;MQ=63.32;MQ0=0;MQRankSum=-1.601;QD=33.68;ReadPosRankSum=1.194;VQSLOD=0.4945;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:35.94:0,36,365	1/1:0,11:11:30.10:420,30,0	0/0:13,0:13:33.07:0,33,375	0/0:6,0:6:14.96:0,15,163	1/1:5,14:19:32.63:413,33,0	0/0:13,0:13:36.11:0,36,428	0/0:16,0:16:30.05:0,30,340	0/0:16,0:16:39:0,39,410	1/1:2,11:13:33.11:468,33,0	1/1:5,13:18:47.52:599,48,0	1/1:2,21:23:51.08:697,51,0	0/0:8,0:8:9.03:0,9,107	0/0:21,0:21:51.13:0,51,593	0/0:18,0:18:48.02:0,48,524	1/1:2,10:12:33:425,33,0	1/1:2,13:15:39.13:552,39,0	0/0:5,0:5:9.03:0,9,107	0/0:3,0:3:9.03:0,9,107	1/1:2,7:9:15.02:193,15,0	1/1:1,24:25:66.09:896,66,0	1/1:0,6:6:17.99:233,18,0	0/0:12,0:12:36.04:0,36,396	0/0:16,0:16:32.87:0,33,321	0/0:6,0:6:17.93:0,18,166	1/1:1,19:20:57.12:778,57,0	1/1:2,17:19:54.13:747,54,0	1/1:5,18:23:57.12:785,57,0	0/0:3,0:3:6.02:0,6,72
chr10	94938110	.	C	CGATA	9615.52	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-12.344;DP=542;FS=3.566;HRun=0;HaplotypeScore=97.0220;InbreedingCoeff=0.9621;MQ=80.85;MQ0=2;MQRankSum=-5.393;QD=50.61;ReadPosRankSum=1.401;VQSLOD=5.9360;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:90.31:0,90,1635	0/0:8,0:8:18.06:0,18,326	0/0:17,0:17:39.10:0,39,635	0/0:17,0:18:36.11:0,36,589	0/0:8,0:8:17.79:0,18,327	1/1:2,10:12:27.09:691,27,0	1/1:9,28:40:72.25:1883,72,0	1/1:10,12:22:36.12:941,36,0	0/0:20,0:20:54.19:0,54,982	0/0:14,0:14:27.09:0,27,490	0/0:10,0:10:21.07:0,21,381	1/1:5,20:26:54.18:1412,54,0	1/1:4,16:21:45.15:1174,45,0	1/1:9,19:29:60.21:1554,60,0	0/0:22,0:22:60.19:0,60,1062	0/0:23,0:23:63.22:0,63,1126	0/0:29,0:29:81.23:0,81,1408	0/0:31,0:31:84.27:0,84,1497	0/0:13,0:13:36.06:0,36,565	0/0:17,0:17:36.12:0,36,648	0/0:41,0:41:99:0,111,1996	1/1:4,7:12:15.05:393,15,0	1/1:0,3:3:3.01:78,3,0	1/1:1,18:19:45.15:1174,45,0	0/0:14,0:14:33.11:0,33,599	0/0:11,0:11:18.06:0,18,327	0/0:21,0:21:57.16:0,57,1000	1/1:0,5:4:12.04:314,12,0
chr10	94938380	.	GCACACACA	G	3771.83	PASS	AB=0.732;AC=41;AF=0.788;AN=52;BaseQRankSum=4.534;DP=644;FS=2.253;HRun=0;HaplotypeScore=171.9040;InbreedingCoeff=0.5021;MQ=63.50;MQ0=22;MQRankSum=-5.548;QD=8.87;ReadPosRankSum=1.584;VQSLOD=2.6480;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:41:37.89:0,38,509	1/1:5,3:8:3.44:22,3,0	./.	./.	1/1:7,0:9:2.03:6,2,0	0/1:8,6:15:15.77:86,0,16	1/1:18,14:35:21.50:387,21,0	0/0:27,0:27:33.11:0,33,758	1/1:13,10:24:24.08:582,24,0	1/1:16,0:19:9.24:125,9,0	0/1:6,0:8:0.01:0,0,0	1/1:9,10:21:11.61:281,12,0	1/1:14,8:22:23.98:470,24,0	1/1:15,12:30:26.98:526,27,0	1/1:19,12:33:17.75:315,18,0	1/1:7,3:11:6.02:131,6,0	0/0:13,0:22:33.10:0,33,627	0/0:14,0:19:36.11:0,36,765	1/1:14,0:21:9.42:149,9,0	1/1:4,0:11:5.63:16,6,0	1/1:40,0:52:2.37:7,2,0	1/1:8,1:9:0.47:1,0,0	1/1:8,4:12:3.01:76,3,0	1/1:20,10:29:2.52:36,3,0	1/1:5,6:12:5.97:51,6,0	1/1:12,0:16:9.03:167,9,0	1/1:4,0:14:16.39:284,16,0	0/1:6,1:10:54.10:54,0,308
chr10	94939229	.	TACAC	T	1971	PASS	AB=0.825;AC=29;AF=0.604;AN=48;BaseQRankSum=3.249;DP=583;FS=1.559;HRun=0;HaplotypeScore=121.0078;InbreedingCoeff=-0.0917;MQ=55.52;MQ0=7;MQRankSum=-1.331;QD=3.91;ReadPosRankSum=3.543;VQSLOD=2.3839;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:34:66.58:67,0,125	./.	./.	./.	./.	1/1:15,11:26:20.91:281,21,0	1/1:16,9:26:15.04:215,15,0	0/0:17,0:17:5.98:0,6,46	1/1:13,0:37:17.98:160,18,0	0/1:23,0:23:11.76:65,0,12	0/1:8,0:8:6.62:11,0,7	0/1:9,7:15:6.85:128,0,7	0/1:8,7:15:2.38:41,0,2	0/1:12,12:24:1.10:110,0,1	1/1:16,0:36:12.48:113,12,0	1/1:15,0:31:15.49:140,15,0	0/1:20,0:28:24.77:25,0,73	0/1:12,1:21:12:68,0,12	0/1:9,0:8:0.49:0,0,5	0/1:14,0:17:0:0,0,0	0/1:52,3:55:99:100,0,389	0/1:10,3:13:0:0,0,0	1/1:4,7:11:13.52:190,14,0	0/1:14,17:31:1.62:266,0,2	1/1:4,0:8:6.01:56,6,0	0/1:13,1:16:32.37:32,0,74	0/1:13,0:14:36.68:37,0,57	0/0:3,0:3:6.02:0,6,77
chr10	94939348	.	A	AT	3069.59	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=0.816;DP=528;FS=13.183;HRun=0;HaplotypeScore=97.2738;InbreedingCoeff=0.9705;MQ=66.60;MQ0=2;MQRankSum=1.913;QD=13.40;ReadPosRankSum=5.276;VQSLOD=4.1854;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:60.79:0,61,572	1/1:14,0:14:33.84:188,34,0	0/0:22,0:11:13.89:0,14,124	0/0:20,0:14:23.48:0,23,219	1/1:26,0:26:46.73:279,47,0	0/0:27,0:26:63.59:0,64,417	0/0:11,0:11:21.89:0,22,190	0/0:40,0:38:78.18:0,78,566	1/1:17,0:17:39.55:247,40,0	1/1:23,1:23:58.60:423,59,0	1/1:13,2:15:39.88:282,40,0	0/0:13,0:13:26.13:0,26,199	0/0:11,0:11:15.98:0,16,91	0/0:21,0:21:43.04:0,43,312	1/1:18,0:17:48.58:294,49,0	1/1:15,0:15:40.78:254,41,0	0/0:25,0:25:56.72:0,57,531	0/0:9,0:8:15.02:0,15,147	1/1:4,14:18:33.98:382,34,0	1/1:5,11:16:7.20:158,7,0	1/1:5,0:5:8.13:47,8,0	0/0:29,0:29:69.79:0,70,502	0/0:15,0:15:27.18:0,27,212	0/0:15,0:15:31.24:0,31,203	1/1:22,0:22:47.11:278,47,0	1/1:15,0:15:34.05:243,34,0	1/1:22,2:24:23.31:223,23,0	0/0:14,0:14:33.15:0,33,208
chr10	94939661	.	TAGACAGAC	T	10214.46	PASS	AB=0.600;AC=43;AF=0.768;AN=56;BaseQRankSum=13.324;DP=655;FS=2.599;HRun=0;HaplotypeScore=222.1006;InbreedingCoeff=0.7968;MQ=59.68;MQ0=1;MQRankSum=-8.525;QD=21.69;ReadPosRankSum=1.527;VQSLOD=3.9554;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,105,3435	1/1:7,0:7:12.04:300,12,0	0/0:19,0:18:31.63:0,32,804	0/0:33,0:27:54.19:0,54,1600	1/1:21,0:21:15.02:204,15,0	1/1:6,23:29:15.04:295,15,0	1/1:5,19:24:24.04:528,24,0	1/1:36,0:36:78.19:1328,78,0	1/1:16,0:16:30.02:544,30,0	1/1:27,0:27:51.05:846,51,0	1/1:13,0:13:8.98:128,9,0	1/1:0,20:20:24.08:548,24,0	1/1:9,18:27:18.06:438,18,0	1/1:7,18:25:20.84:469,21,0	1/1:18,0:18:15:324,15,0	1/1:23,0:23:51.10:991,51,0	0/0:40,0:40:99:0,105,3721	0/0:25,0:25:57.19:0,57,2192	1/1:20,0:17:24.04:469,24,0	1/1:7,0:15:2.97:20,3,0	0/0:24,0:24:2.01:0,2,6	1/1:3,24:27:2.72:78,3,0	0/1:6,12:18:0:0,0,0	1/1:10,23:33:2.61:78,3,0	1/1:16,0:16:9.03:234,9,0	1/1:28,0:28:53.98:822,54,0	1/1:18,0:18:39.08:890,39,0	1/1:10,0:10:30.10:680,30,0
chr10	94939671	.	GACA	G	1339.27	PASS	AB=0.859;AC=22;AF=0.393;AN=56;BaseQRankSum=14.118;DP=665;FS=10.355;HRun=0;HaplotypeScore=206.9903;InbreedingCoeff=-0.4926;MQ=53.46;MQ0=4;MQRankSum=-11.130;QD=2.87;ReadPosRankSum=9.607;VQSLOD=-0.3598;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,2543	1/1:1,6:7:11.60:91,12,0	0/0:24,0:19:49.04:0,49,987	0/0:32,0:24:69.13:0,69,1353	0/1:18,4:22:4.33:4,0,97	0/1:28,0:28:21.12:21,0,169	0/1:24,0:24:63.25:63,0,125	0/1:36,0:36:16.31:16,0,639	0/1:11,7:18:92.09:102,0,92	0/1:19,7:26:99:136,0,209	0/1:11,5:16:9.32:9,0,73	0/1:21,0:21:47.01:69,0,47	0/1:24,0:24:48.36:48,0,85	0/1:27,0:27:37.91:38,0,266	0/1:7,10:17:64.37:64,0,69	0/1:12,12:24:32.29:214,0,32	0/0:43,0:43:99:0,129,2742	0/0:29,0:29:87.29:0,87,1810	0/1:15,4:16:94.15:94,0,159	0/0:8,6:14:0.47:0,0,101	0/1:25,3:28:29.14:29,0,97	0/1:25,1:26:10.03:10,0,33	0/0:17,0:17:18.03:0,18,206	0/1:29,0:29:7.06:7,0,69	0/1:10,8:18:53.34:53,0,119	0/1:18,6:24:99:124,0,189	0/1:5,13:18:16.30:254,0,16	0/1:14,0:14:48.41:48,0,85
chr10	94939675	.	GACAGA	G	3107.26	PASS	AB=0.862;AC=24;AF=0.429;AN=56;BaseQRankSum=14.941;DP=660;FS=0.795;HRun=0;HaplotypeScore=219.8344;InbreedingCoeff=-0.3706;MQ=51.15;MQ0=4;MQRankSum=-10.503;QD=6.73;ReadPosRankSum=7.790;VQSLOD=1.8473;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,3214	1/1:1,6:7:20.94:222,21,0	0/0:28,0:21:62.02:0,62,1328	0/0:30,0:22:63.21:0,63,1625	0/1:19,4:23:42.17:85,0,42	0/1:27,0:27:60.57:61,0,151	0/1:24,0:24:99:136,0,120	0/1:29,0:37:99:184,0,353	0/1:11,7:18:37.36:233,0,37	0/1:18,7:25:81.73:237,0,82	0/1:11,5:16:15.74:43,0,16	0/1:21,0:21:37.63:143,0,38	0/1:23,0:23:67.22:116,0,67	0/1:25,0:25:99:105,0,188	0/1:8,10:18:44.78:123,0,45	1/1:11,12:23:6.68:418,7,0	0/0:42,0:42:99:0,126,3513	0/0:31,0:31:93.30:0,93,2393	0/1:12,4:13:43.21:177,0,43	0/0:9,6:15:10.60:0,11,66	0/1:23,3:26:17.25:17,0,76	0/1:25,1:26:22.14:22,0,40	0/0:13,0:13:6.02:0,6,90	0/1:28,0:28:22.23:22,0,38	0/1:11,8:19:33.43:136,0,33	0/1:21,6:27:99:224,0,203	1/1:5,13:18:2.89:395,3,0	0/1:10,0:15:92.78:176,0,93
chr10	94939679	.	GACAGA	G	3544.93	PASS	AB=0.974;AC=22;AF=0.393;AN=56;BaseQRankSum=14.838;DP=654;FS=3.911;HRun=0;HaplotypeScore=216.2623;InbreedingCoeff=-0.4064;MQ=48.37;MQ0=4;MQRankSum=-8.221;QD=8.34;ReadPosRankSum=6.782;VQSLOD=1.5257;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,3361	0/1:7,0:7:18.14:141,0,18	0/0:28,0:21:61.75:0,62,1293	0/0:30,0:21:63.22:0,63,1651	0/1:20,0:20:21.57:98,0,22	0/1:25,0:25:11.54:70,0,12	0/1:26,0:26:99:134,0,189	0/1:29,8:37:76.20:419,0,76	0/1:19,0:20:78.33:209,0,78	0/1:25,0:25:79.85:242,0,80	0/1:14,0:14:12.18:49,0,12	0/1:21,0:21:69.40:142,0,69	0/1:24,0:24:99:113,0,106	0/1:24,0:24:99:110,0,154	0/1:15,0:15:87.77:123,0,88	0/1:22,0:22:8.71:397,0,9	0/0:42,0:42:99:0,126,3508	0/0:30,0:30:90.29:0,90,2342	0/1:15,0:13:83.73:180,0,84	0/0:17,0:17:14.84:0,15,130	0/0:27,0:27:8.35:0,8,88	1/1:25,0:25:3:28,3,0	0/0:13,0:13:3.01:0,3,44	1/1:27,0:27:4.13:31,4,0	0/1:18,0:18:84.69:85,0,138	0/1:28,0:28:99:234,0,179	0/1:17,0:17:22.54:393,0,23	0/1:10,5:15:22.65:347,0,23
chr10	94940377	.	G	GCAGCAACAACGA	16976.61	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=2.169;DP=514;FS=6.164;HRun=0;HaplotypeScore=187.2448;InbreedingCoeff=0.9833;MQ=71.97;MQ0=0;MQRankSum=-13.568;QD=73.18;ReadPosRankSum=-4.903;VQSLOD=2.9637;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.22:0,90,2168	1/1:6,6:13:27.05:1055,27,0	0/0:17,0:17:48.13:0,48,1218	0/0:24,0:24:72.01:0,72,1734	1/1:4,2:15:18.06:507,18,0	0/0:10,0:10:24.05:0,24,690	0/0:20,0:20:57.17:0,57,1814	0/0:13,0:13:30.01:0,30,912	1/1:5,9:17:12.18:1631,12,0	1/1:18,0:18:42.09:901,42,0	1/1:6,4:14:12.04:365,12,0	0/0:13,0:13:39.03:0,39,1208	0/0:19,0:19:51.16:0,51,1797	0/0:27,0:27:72.23:0,72,2484	1/1:1,12:14:30.10:1851,30,0	1/1:3,15:22:33.11:1941,33,0	0/0:27,0:27:78.25:0,78,2634	0/0:23,0:23:66.16:0,66,2236	1/1:10,0:10:30.06:824,30,0	1/1:10,4:19:36.12:1121,36,0	1/1:18,0:18:42.93:1047,43,0	0/0:11,0:11:12.03:0,12,300	0/0:9,0:9:14.92:0,15,323	0/0:25,0:25:75.19:0,75,2502	1/1:18,0:18:44.90:1013,45,0	1/1:14,4:23:57.18:1948,57,0	1/1:5,16:29:48.64:2772,49,0	0/0:10,0:10:30.09:0,30,954
chr10	94941614	.	G	GC	17814.43	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=11.895;DP=663;FS=11.501;HRun=4;HaplotypeScore=181.2740;InbreedingCoeff=0.9949;MQ=63.60;MQ0=0;MQRankSum=-14.442;QD=35.21;ReadPosRankSum=-1.386;VQSLOD=1.8736;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,123,1394	1/1:0,9:9:24.08:325,24,0	0/0:25,0:25:63.15:0,63,689	0/0:26,0:25:60.09:0,60,641	1/1:1,22:23:49.53:724,50,0	1/1:1,18:19:54.18:733,54,0	1/1:6,23:29:78.15:1016,78,0	1/1:3,28:31:81.24:1081,81,0	1/1:4,15:19:51.11:667,51,0	1/1:2,24:26:72.24:979,72,0	1/1:2,8:10:21.82:296,22,0	1/1:1,23:24:72.23:953,72,0	1/1:2,22:24:69.17:899,69,0	1/1:2,16:18:51.17:688,51,0	1/1:2,21:23:63.21:842,63,0	1/1:5,20:25:72.13:915,72,0	0/0:31,0:31:93.27:0,93,1055	0/0:29,0:29:83.01:0,83,909	1/1:6,15:21:57.19:767,57,0	1/1:1,34:35:99:1331,99,0	1/1:4,19:23:32.18:505,32,0	1/1:3,14:17:48.14:616,48,0	1/1:1,17:17:47.82:650,48,0	1/1:4,12:16:32.99:396,33,0	1/1:4,20:24:60.20:815,60,0	1/1:8,24:32:84.26:1108,84,0	1/1:6,29:35:99:1309,99,0	1/1:0,5:5:15.05:199,15,0
chr10	94941621	.	T	TTGG	26184.07	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=15.750;DP=687;FS=6.171;HRun=0;HaplotypeScore=184.6774;InbreedingCoeff=0.9916;MQ=58.38;MQ0=0;MQRankSum=-16.062;QD=49.13;ReadPosRankSum=-1.355;VQSLOD=5.7607;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,2312	1/1:2,8:10:27.09:566,27,0	0/0:20,0:20:54.17:0,54,832	0/0:23,0:21:48.16:0,48,752	1/1:7,18:25:45.15:916,45,0	1/1:1,19:20:57.20:1224,57,0	1/1:7,25:33:84.25:1719,84,0	1/1:18,13:31:54.16:1066,54,0	1/1:4,16:20:54.19:1182,54,0	1/1:5,24:29:69.24:1515,69,0	1/1:4,7:11:21.07:409,21,0	1/1:5,22:28:78.25:1619,78,0	1/1:3,23:26:75.21:1586,75,0	1/1:3,15:19:51.18:1107,51,0	1/1:4,18:22:57.15:1203,57,0	1/1:3,23:26:60.17:1272,60,0	0/0:33,0:33:87.30:0,87,1394	0/0:28,0:28:84.22:0,84,1295	1/1:9,13:22:45.09:940,45,0	1/1:9,25:34:78.25:1665,78,0	1/1:4,19:23:45.15:870,45,0	1/1:5,17:22:54.09:1068,54,0	1/1:7,13:20:42.14:914,42,0	1/1:7,12:19:30.06:605,30,0	1/1:5,19:24:60.20:1188,60,0	1/1:8,21:31:78.19:1569,78,0	1/1:8,23:32:81.26:1718,81,0	1/1:1,4:5:12.04:263,12,0
chr10	94942637	.	TGGTTC	T	450.89	PASS	AB=0.970;AC=17;AF=0.315;AN=54;BaseQRankSum=1.429;DP=342;FS=16.556;HRun=0;HaplotypeScore=71.8909;InbreedingCoeff=-0.0738;MQ=41.63;MQ0=21;MQRankSum=0.288;QD=3.03;ReadPosRankSum=-1.604;VQSLOD=-0.6053;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:19:44.55:0,45,969	0/0:11,0:11:2.42:0,2,240	0/0:12,0:7:14.28:0,14,167	0/1:10,0:5:7.96:8,0,40	0/0:12,0:11:19.76:0,20,389	0/1:10,0:7:11.90:95,0,12	0/1:13,0:10:66.59:67,0,178	0/1:14,0:13:17.02:17,0,216	0/0:13,0:12:20.10:0,20,386	0/1:14,0:14:17.88:18,0,661	0/1:11,0:9:54.50:55,0,221	1/1:3,0:3:0.06:42,0,0	1/1:2,0:3:3.01:52,3,0	0/1:5,1:4:37.93:38,0,56	0/0:15,0:13:29.97:0,30,534	0/0:11,0:11:29.99:0,30,519	0/0:42,1:39:25.31:0,25,1511	0/0:23,0:23:8.15:0,8,984	0/1:15,3:15:29.03:29,0,597	0/0:6,0:5:5.93:0,6,138	0/0:2,0:1:3.01:0,3,82	0/0:5,0:3:6.96:0,7,24	./.	0/1:6,0:1:0:0,0,0	0/0:11,0:11:23.50:0,23,259	0/1:20,1:21:99:154,0,647	0/1:13,0:13:10.21:10,0,553	1/1:4,0:1:2.74:12,3,0
chr10	94942645	.	T	TA	584.23	PASS	AB=0.623;AC=4;AF=0.080;AN=50;BaseQRankSum=-1.004;DP=317;FS=17.461;HRun=0;HaplotypeScore=54.4474;InbreedingCoeff=0.3192;MQ=36.43;MQ0=24;MQRankSum=-1.952;QD=18.26;ReadPosRankSum=2.451;VQSLOD=4.3254;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:18:45.02:0,45,520	0/0:10,0:10:23.99:0,24,260	0/0:4,0:2:3.86:0,4,24	0/0:8,0:2:5.21:0,5,22	0/0:12,0:12:26.53:0,27,270	0/0:8,0:6:15.70:0,16,99	0/1:3,8:8:20.23:159,0,20	1/1:3,12:13:36.07:500,36,0	0/0:14,0:13:18:0,18,227	0/0:11,0:11:31.69:0,32,201	0/0:10,0:8:14.42:0,14,87	0/0:2,0:2:3.44:0,3,21	0/0:4,0:2:0.47:0,0,1	0/1:3,3:4:30.56:36,0,31	0/0:18,0:16:36.05:0,36,460	0/0:13,0:13:39.06:0,39,474	0/0:44,0:40:99:0,106,1140	0/0:28,0:27:65.92:0,66,696	0/0:15,0:9:25.85:0,26,162	0/0:6,0:5:5.56:0,6,30	0/0:2,0:1:2.97:0,3,20	0/0:5,0:3:8.90:0,9,59	./.	./.	0/0:10,0:10:23.97:0,24,258	0/0:17,0:17:40.19:0,40,205	0/0:13,0:13:27.60:0,28,154	./.
chr10	94942649	.	T	TTTTC	1213.33	PASS	AC=10;AF=0.263;AN=38;BaseQRankSum=-0.799;DP=220;FS=8.037;HRun=0;HaplotypeScore=63.1679;InbreedingCoeff=0.7489;MQ=37.26;MQ0=26;MQRankSum=-3.166;QD=35.69;ReadPosRankSum=-0.122;VQSLOD=2.9153;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:18:29.99:0,30,522	0/0:7,0:7:14.82:0,15,210	0/0:1,0:1:1.25:0,1,3	0/0:4,0:1:2.98:0,3,21	0/0:9,0:9:14.99:0,15,231	./.	0/0:9,0:6:11.94:0,12,90	0/0:15,0:13:19.69:0,20,251	0/0:10,0:9:14.39:0,14,280	./.	1/1:1,3:2:2.97:20,3,0	./.	./.	0/0:3,0:1:2.99:0,3,23	0/0:16,0:15:36.11:0,36,622	0/0:12,0:12:33.09:0,33,510	0/0:31,0:29:26.93:0,27,905	0/0:24,0:24:50.85:0,51,751	1/1:7,4:4:12:226,12,0	1/1:1,3:3:3.01:84,3,0	./.	./.	./.	./.	0/0:9,0:9:14.94:0,15,216	1/1:1,7:9:24.55:650,25,0	1/1:0,6:6:15.05:370,15,0	./.
chr10	94942776	.	CT	C	470.82	PASS	AB=0.906;AC=14;AF=0.350;AN=40;BaseQRankSum=3.423;DP=247;FS=0.000;HRun=2;HaplotypeScore=57.4047;InbreedingCoeff=0.4418;MQ=96.76;MQ0=3;MQRankSum=-5.338;QD=11.48;ReadPosRankSum=0.628;VQSLOD=1.7558;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,2:32:48.36:0,48,1187	0/1:7,1:8:18.45:18,0,215	0/0:32,0:27:59.16:0,59,920	0/0:28,0:21:54.16:0,54,735	0/1:11,1:12:8.38:8,0,371	./.	0/0:2,0:2:2.04:0,2,6	1/1:2,3:5:1.11:128,1,0	0/0:17,1:18:3.64:0,4,535	1/1:0,1:1:3.01:40,3,0	1/1:0,1:1:3.01:39,3,0	0/0:2,0:2:3.85:0,4,11	./.	./.	0/0:9,0:8:12.04:0,12,170	0/0:10,0:10:18.05:0,18,249	0/0:35,0:34:84.23:0,84,1185	0/0:21,0:21:48.16:0,48,712	1/1:3,6:9:3.16:213,3,0	0/0:1,1:1:0:0,0,0	./.	./.	1/1:0,3:3:9.03:117,9,0	./.	0/0:12,0:11:27.09:0,27,399	./.	1/1:1,1:2:1.62:36,2,0	./.
chr10	94942805	.	T	TA	672.38	PASS	AB=0.750;AC=15;AF=0.268;AN=56;BaseQRankSum=0.298;DP=279;FS=27.510;HRun=0;HaplotypeScore=44.4342;InbreedingCoeff=0.4293;MQ=46.22;MQ0=22;MQRankSum=-3.416;QD=12.69;ReadPosRankSum=-0.570;VQSLOD=1.9370;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:62.92:0,63,757	0/0:6,0:6:13.54:0,14,133	0/0:5,0:3:3.01:0,3,33	0/0:8,0:3:4.07:0,4,39	0/0:17,0:17:24.45:0,24,275	1/1:2,1:1:3.01:44,3,0	0/1:5,2:5:10.87:80,0,11	1/1:4,10:10:24:308,24,0	0/0:14,0:14:36.06:0,36,420	0/0:11,0:9:18.34:0,18,111	0/0:4,0:4:5.95:0,6,42	0/1:3,5:7:23.67:118,0,24	1/1:2,2:3:3.01:45,3,0	1/1:1,3:3:6.02:89,6,0	0/0:14,0:13:21.05:0,21,263	0/0:6,0:6:12.04:0,12,162	0/0:36,0:29:72.11:0,72,911	0/0:30,0:28:74.94:0,75,928	0/0:8,0:4:8.21:0,8,35	0/0:6,0:6:7.38:0,7,29	0/0:2,0:2:2.66:0,3,19	1/1:0,4:4:6.02:89,6,0	0/0:4,6:9:5.42:0,5,27	1/1:3,0:2:2.81:23,3,0	0/0:14,0:12:26.99:0,27,303	0/0:3,0:3:8.23:0,8,39	0/0:6,0:5:5.65:0,6,31	0/1:5,1:3:35.66:36,0,69
chr10	94942809	.	T	TTTTC	792.06	PASS	AB=1.000;AC=13;AF=0.250;AN=52;BaseQRankSum=-0.760;DP=258;FS=7.150;HRun=0;HaplotypeScore=51.4113;InbreedingCoeff=0.6186;MQ=45.84;MQ0=25;MQRankSum=-1.697;QD=17.60;ReadPosRankSum=-2.664;VQSLOD=1.6025;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:50.81:0,51,900	0/0:5,0:5:11.99:0,12,133	./.	./.	0/0:9,0:9:15.05:0,15,281	0/0:4,0:2:2.99:0,3,23	0/0:5,0:2:5.97:0,6,44	0/0:14,0:10:23.92:0,24,190	0/0:11,0:11:25.83:0,26,440	1/1:2,8:9:17.94:308,18,0	1/1:0,1:5:3.01:72,3,0	0/0:7,0:6:11.89:0,12,86	0/0:3,0:2:2.99:0,3,24	0/0:5,0:4:5.97:0,6,45	0/0:14,0:14:27.04:0,27,381	0/0:6,0:6:18.04:0,18,266	0/0:35,0:29:63.07:0,63,1114	0/0:30,0:28:60.13:0,60,1072	0/1:6,0:1:0:0,0,0	1/1:0,2:5:6.02:156,6,0	1/1:1,0:3:0.47:1,0,0	0/0:4,0:4:5.98:0,6,46	0/0:7,0:6:2.97:0,3,20	0/0:5,0:4:2.78:0,3,26	0/0:12,0:10:26.99:0,27,374	1/1:0,6:7:17.88:312,18,0	1/1:0,4:7:3.01:83,3,0	0/0:6,0:3:9.01:0,9,85
chr10	94943048	.	AC	A	1498.62	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.960;DP=575;FS=12.563;HRun=2;HaplotypeScore=55.5028;InbreedingCoeff=0.9818;MQ=66.34;MQ0=0;MQRankSum=-1.958;QD=33.30;ReadPosRankSum=-4.355;VQSLOD=0.9843;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.21:0,66,969	0/0:14,0:14:36.12:0,36,539	0/0:18,0:17:21.98:0,22,557	0/0:15,0:14:12.22:0,12,421	0/0:11,0:11:27.09:0,27,403	0/0:23,0:23:69.23:0,69,1034	0/0:27,0:27:81.27:0,81,1206	1/1:0,34:33:99:1269,99,0	0/0:14,0:14:42.14:0,42,628	0/0:21,0:21:63.17:0,63,904	0/0:10,0:10:30.10:0,30,449	0/0:19,0:19:54.17:0,54,791	0/0:24,0:24:69.23:0,69,1023	0/0:22,0:22:66.22:0,66,961	0/0:15,0:15:45.14:0,45,656	0/0:12,0:12:36.12:0,36,538	0/0:29,0:29:87.28:0,87,1278	0/0:36,0:36:99:0,102,1490	0/0:13,0:13:36.10:0,36,518	0/0:18,0:18:54.18:0,54,805	0/0:33,0:33:96.27:0,96,1406	0/0:15,0:15:42.14:0,42,629	0/0:17,0:17:51.17:0,51,753	0/0:26,0:26:78.26:0,78,1164	0/0:23,0:23:69.22:0,69,1014	0/0:28,0:28:81.26:0,81,1191	0/0:25,0:25:69.23:0,69,1034	1/1:0,11:11:27.09:350,27,0
chr10	94944141	.	CCTT	C	387.72	PASS	AB=0.896;AC=12;AF=0.250;AN=48;BaseQRankSum=3.588;DP=362;FS=16.652;HRun=0;HaplotypeScore=115.8990;InbreedingCoeff=-0.1818;MQ=36.22;MQ0=65;MQRankSum=-2.516;QD=3.15;ReadPosRankSum=-0.247;VQSLOD=1.1227;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:39:99:0,110,1601	0/1:4,1:4:28.47:28,0,48	./.	./.	0/0:8,5:13:4.29:0,4,210	0/0:11,0:8:17.85:0,18,206	0/1:15,1:9:34.09:34,0,37	./.	0/1:12,2:11:26.81:27,0,171	0/0:10,0:7:15.61:0,16,89	0/1:5,0:5:2.56:3,0,10	0/0:12,0:12:16.38:0,16,205	0/1:12,0:10:20.09:20,0,187	0/1:6,0:6:7.46:7,0,45	0/1:2,12:14:11.94:121,0,12	0/1:16,4:17:99:164,0,111	0/0:38,0:33:84.96:0,85,1291	0/0:23,0:19:51.13:0,51,743	0/0:7,0:2:2.37:0,2,9	./.	0/0:14,0:9:19.85:0,20,124	0/0:12,0:9:17.80:0,18,198	0/0:9,0:5:5.23:0,5,73	0/0:20,0:16:21.38:0,21,207	0/1:15,1:15:33.79:34,0,119	0/0:8,0:5:8.85:0,9,67	0/1:13,0:9:43.02:75,0,43	1/1:2,0:1:2.04:6,2,0
chr10	94944179	.	TCC	T	292.10	PASS	AB=0.815;AC=11;AF=0.196;AN=56;BaseQRankSum=4.995;DP=462;FS=6.780;HRun=2;HaplotypeScore=151.1753;InbreedingCoeff=0.2806;MQ=37.25;MQ0=50;MQRankSum=-6.466;QD=2.34;ReadPosRankSum=2.591;VQSLOD=-0.6715;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:38:99:0,102,1894	0/0:7,0:6:12.01:0,12,126	0/1:26,0:9:7.23:7,0,298	0/0:23,0:8:11.98:0,12,136	0/0:17,0:15:13.26:0,13,131	1/1:7,6:11:4.15:88,4,0	0/1:13,4:14:35.80:36,0,46	0/0:22,0:10:28.15:0,28,354	0/0:9,0:6:11.96:0,12,137	0/0:12,0:10:24.77:0,25,177	0/0:9,0:9:18.10:0,18,82	0/1:6,5:11:26.54:45,0,27	1/1:2,9:10:4.36:125,4,0	1/1:4,6:10:5.54:67,6,0	0/0:5,0:5:3.38:0,3,12	0/0:15,0:13:22:0,22,215	0/0:41,0:36:96.29:0,96,1858	0/0:23,0:20:51.07:0,51,965	0/0:23,0:19:53.95:0,54,722	0/0:8,0:8:15.89:0,16,206	0/0:15,0:11:12.92:0,13,173	0/1:9,5:14:33.12:53,0,33	0/0:7,2:7:11.56:0,12,85	0/1:17,4:17:14.98:15,0,65	0/0:17,0:16:27.85:0,28,273	0/0:12,0:10:30.05:0,30,475	0/0:18,0:15:42.10:0,42,656	0/0:7,0:5:13.91:0,14,131
chr10	94944181	.	CTCT	C	2171.47	PASS	AB=0.968;AC=29;AF=0.518;AN=56;BaseQRankSum=4.916;DP=459;FS=8.203;HRun=0;HaplotypeScore=153.1353;InbreedingCoeff=0.1631;MQ=37.57;MQ0=44;MQRankSum=-8.295;QD=8.38;ReadPosRankSum=-2.724;VQSLOD=1.8307;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:39:73.14:0,73,1860	0/1:5,0:4:2.25:2,0,35	0/0:31,0:9:26.37:0,26,341	0/0:31,0:9:0.44:0,0,100	0/1:14,1:14:6.67:47,0,7	1/1:12,0:10:19.88:240,20,0	0/1:12,3:12:0.91:156,0,1	1/1:19,0:10:16.92:56,17,0	0/1:9,0:7:11.59:12,0,43	1/1:10,2:10:24.36:284,24,0	1/1:8,1:9:5.79:226,6,0	1/1:11,1:12:8.77:179,9,0	1/1:10,0:10:27.53:341,28,0	1/1:9,1:10:25.58:256,26,0	0/1:5,0:5:10.03:10,0,13	0/1:11,1:10:16.76:17,0,61	0/0:43,0:38:96.24:0,96,1962	0/0:22,0:20:48.12:0,48,1049	0/1:21,0:18:61.23:61,0,62	0/0:11,0:11:13.50:0,14,83	0/1:15,0:11:9.89:17,0,10	1/1:14,0:14:28.28:257,28,0	0/1:9,0:7:10.89:43,0,11	0/1:18,1:15:7.78:71,0,8	0/1:15,1:15:42.09:45,0,42	0/1:13,0:11:2.16:2,0,45	0/0:19,0:17:29.24:0,29,148	0/1:7,0:5:3.96:28,0,4
chr10	94944183	.	CT	C	109.57	PASS	AB=0.731;AC=10;AF=0.179;AN=56;BaseQRankSum=5.214;DP=426;FS=3.489;HRun=2;HaplotypeScore=146.5883;InbreedingCoeff=0.2168;MQ=38.75;MQ0=34;MQRankSum=-5.776;QD=1.30;ReadPosRankSum=2.647;VQSLOD=-0.3803;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:38:99:0,100,1472	0/0:4,0:4:9.34:0,9,31	0/0:33,1:9:25.88:0,26,344	0/0:35,0:11:14.70:0,15,176	0/0:11,0:10:6.21:0,6,40	1/1:4,6:8:5.08:38,5,0	0/1:8,4:10:11.49:23,0,11	0/0:17,0:9:22.09:0,22,181	0/0:8,0:7:13.93:0,14,88	0/0:11,0:10:8.68:0,9,61	0/0:9,0:9:2.33:0,2,22	0/1:5,6:11:29.99:35,0,30	0/1:1,9:10:3.39:51,0,3	1/1:4,6:10:9.22:55,9,0	0/0:3,0:3:3.78:0,4,11	0/0:11,0:10:16.25:0,16,83	0/0:43,0:38:96.33:0,96,1438	0/0:23,0:21:48.16:0,48,719	0/0:18,0:15:41.74:0,42,338	0/0:10,0:10:16.50:0,16,107	0/0:13,0:11:13.23:0,13,103	0/1:6,5:11:33.59:34,0,41	0/1:5,2:5:10.06:10,0,37	0/0:10,4:12:2.69:0,3,51	0/1:13,0:12:0.53:1,0,96	0/0:12,0:11:32.30:0,32,252	0/0:19,0:17:46.06:0,46,389	0/0:6,0:5:12.83:0,13,94
chr10	94944190	.	CTCTTCT	C	4230.79	PASS	AB=0.941;AC=42;AF=0.750;AN=56;BaseQRankSum=12.755;DP=456;FS=57.365;HRun=0;HaplotypeScore=182.7915;InbreedingCoeff=0.6283;MQ=43.12;MQ0=32;MQRankSum=-11.119;QD=15.79;ReadPosRankSum=-0.840;VQSLOD=2.2953;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:96.26:0,96,2928	1/1:5,0:5:11.76:71,12,0	0/0:38,0:11:29.69:0,30,764	0/0:46,0:17:38.03:0,38,694	1/1:11,0:10:15.55:122,16,0	1/1:11,0:9:20.62:130,21,0	1/1:15,0:13:11.70:186,12,0	1/1:11,6:10:16.43:245,16,0	0/1:8,0:7:10.16:39,0,10	1/1:12,2:13:31.30:379,31,0	1/1:9,1:10:19.11:146,19,0	1/1:16,0:16:38.79:272,39,0	1/1:11,0:11:31.06:180,31,0	1/1:12,0:12:32.51:254,33,0	1/1:4,0:4:8.75:50,9,0	1/1:14,0:13:24.45:148,24,0	0/0:43,0:39:99:0,105,3319	0/0:21,0:19:54.15:0,54,1641	0/1:14,2:15:33.82:346,0,34	1/1:10,0:10:23.80:159,24,0	1/1:8,4:10:14.82:125,15,0	1/1:8,0:9:26.49:207,26,0	1/1:7,0:5:11.53:84,12,0	0/1:11,0:10:41.64:81,0,42	1/1:14,0:13:34.71:211,35,0	1/1:12,2:13:28.38:307,28,0	1/1:16,4:18:49.47:413,49,0	0/1:6,1:4:0.73:75,0,1
chr10	94944195	.	CT	C	132.38	PASS	AB=0.983;AC=12;AF=0.214;AN=56;BaseQRankSum=4.518;DP=448;FS=1.922;HRun=2;HaplotypeScore=170.6773;InbreedingCoeff=-0.0028;MQ=46.68;MQ0=26;MQRankSum=-6.252;QD=1.09;ReadPosRankSum=1.849;VQSLOD=-0.5750;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:87.27:0,87,1278	0/0:4,0:4:11.84:0,12,84	0/0:41,0:14:32.34:0,32,455	0/0:51,1:19:0.78:0,1,441	0/0:10,0:9:5.79:0,6,80	0/1:10,0:8:7.67:29,0,8	0/1:16,0:14:3.03:3,0,58	0/1:12,1:7:0.81:20,0,1	0/1:7,0:6:5.30:5,0,79	0/1:15,0:15:18.06:57,0,18	1/1:10,0:10:7.26:53,7,0	0/0:15,1:16:7.18:0,7,125	0/1:12,0:12:35.24:36,0,35	0/1:12,0:12:12.38:12,0,54	0/1:7,0:7:17.89:43,0,18	0/0:14,0:13:22.65:0,23,157	0/0:41,0:39:99:0,105,1541	0/0:22,0:21:54.18:0,54,796	0/0:13,0:12:29.30:0,29,202	0/0:12,0:12:9.97:0,10,119	0/0:10,0:8:14.42:0,14,91	0/1:8,1:9:5.21:5,0,43	0/0:7,0:6:3.73:0,4,42	0/1:10,0:9:7.46:7,0,21	0/0:14,0:13:32.14:0,32,221	0/0:13,0:12:28.80:0,29,192	0/0:18,0:17:48.34:0,48,348	0/0:6,0:4:8.24:0,8,45
chr10	94944200	.	TC	T	456.69	PASS	AB=0.941;AC=16;AF=0.286;AN=56;BaseQRankSum=8.374;DP=471;FS=2.270;HRun=2;HaplotypeScore=184.9660;InbreedingCoeff=-0.1816;MQ=50.22;MQ0=21;MQRankSum=-7.551;QD=2.51;ReadPosRankSum=1.308;VQSLOD=-0.0735;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:90.29:0,90,1322	0/0:4,0:4:10.22:0,10,112	0/0:42,1:15:41.67:0,42,523	0/0:55,1:22:47.52:0,48,539	0/1:8,2:9:16.15:23,0,16	0/1:9,0:8:13.77:14,0,37	0/1:11,3:14:6.35:6,0,32	0/0:13,0:7:14.51:0,15,87	0/1:7,0:7:22.27:22,0,119	0/1:9,6:15:2.16:174,0,2	1/1:4,7:11:13.09:183,13,0	0/0:15,1:16:14.41:0,14,184	0/1:12,0:12:0.09:0,0,67	0/1:12,2:14:30.18:30,0,70	0/1:8,0:8:15.19:44,0,15	0/0:15,1:16:1.57:0,2,125	0/0:39,0:37:99:0,99,1457	0/0:22,0:21:60.20:0,60,893	0/0:14,0:13:3.54:0,4,109	0/1:16,0:16:10.37:10,0,38	0/0:10,0:8:1.19:0,1,39	0/1:13,0:13:9.90:24,0,10	0/1:7,0:6:5.74:6,0,23	0/1:12,1:12:22.70:23,0,44	0/0:16,1:16:12.35:0,12,126	0/1:13,0:13:12.72:13,0,28	0/1:20,0:20:34.84:35,0,64	0/0:6,0:4:7.09:0,7,104
chr10	94944224	.	CCT	C	353.03	PASS	AB=0.767;AC=8;AF=0.143;AN=56;BaseQRankSum=7.299;DP=570;FS=37.046;HRun=0;HaplotypeScore=205.7996;InbreedingCoeff=-0.0238;MQ=48.08;MQ0=20;MQRankSum=-6.740;QD=2.60;ReadPosRankSum=2.674;VQSLOD=1.5333;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:65.03:0,65,843	1/1:3,0:3:2.60:6,3,0	0/0:39,0:10:14.21:0,14,301	0/0:47,0:16:23.32:0,23,384	0/0:18,0:18:28.35:0,28,180	0/0:11,0:10:13.36:0,13,101	0/0:20,0:17:17.51:0,18,178	0/0:12,0:7:14.71:0,15,93	0/0:9,0:8:5.16:0,5,28	0/1:18,5:23:68.47:68,0,371	0/0:18,3:21:43.29:0,43,443	0/0:18,0:18:29.71:0,30,194	0/0:18,0:16:27.62:0,28,247	0/0:17,0:17:17.61:0,18,134	0/0:14,0:14:27.92:0,28,171	0/0:16,0:15:0.44:0,0,78	0/0:39,0:37:99:0,102,1448	0/0:25,0:24:68.04:0,68,962	0/1:14,5:20:99:102,0,344	0/1:19,10:29:49.96:50,0,464	0/1:4,2:5:22.55:26,0,23	0/0:23,0:21:37.86:0,38,335	0/0:15,0:14:17:0,17,190	0/0:11,0:11:15.14:0,15,78	0/0:28,0:26:8.29:0,8,93	0/1:14,7:20:99:100,0,187	0/1:22,12:34:99:127,0,519	0/0:6,0:4:11.56:0,12,77
chr10	94944229	.	TTC	T	3111.11	PASS	AB=0.829;AC=23;AF=0.411;AN=56;BaseQRankSum=13.173;DP=599;FS=18.904;HRun=0;HaplotypeScore=192.5568;InbreedingCoeff=-0.4475;MQ=45.38;MQ0=36;MQRankSum=-10.048;QD=7.53;ReadPosRankSum=6.435;VQSLOD=1.4700;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:33.99:0,34,564	1/1:2,2:4:5.75:59,6,0	0/0:33,0:7:16.36:0,16,198	0/0:37,0:14:26.10:0,26,266	0/1:17,4:21:79.87:80,0,265	0/1:8,6:13:76.18:101,0,76	0/1:17,5:18:21.46:122,0,21	0/1:15,0:7:11.82:50,0,12	0/1:8,3:10:55.37:55,0,115	0/1:21,0:21:99:246,0,133	0/1:23,0:23:99:133,0,289	0/1:14,7:20:99:106,0,350	0/1:14,5:17:83.10:83,0,277	0/1:10,8:18:80.64:145,0,81	0/1:7,7:14:99:109,0,241	0/1:6,10:15:78.05:242,0,78	0/0:41,1:39:86.83:0,87,1230	0/0:25,0:23:48.98:0,49,789	1/1:31,0:23:6.76:273,7,0	0/1:30,0:30:99:266,0,140	0/1:8,0:6:14.70:15,0,36	0/1:13,11:22:99:99,0,343	0/0:16,3:16:0.60:0,1,348	0/1:7,5:12:8.24:47,0,8	0/1:16,12:27:99:299,0,173	0/1:24,0:21:72.03:215,0,72	0/1:36,0:35:99:527,0,113	0/0:6,0:4:12.04:0,12,164
chr10	94944230	.	T	TC	3670.90	PASS	AB=0.960;AC=15;AF=0.268;AN=56;BaseQRankSum=12.341;DP=599;FS=35.840;HRun=1;HaplotypeScore=180.2199;InbreedingCoeff=-0.1791;MQ=45.63;MQ0=36;MQRankSum=-8.613;QD=13.02;ReadPosRankSum=6.111;VQSLOD=0.4804;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:44.25:0,44,614	1/1:4,0:4:4.21:17,4,0	0/0:32,0:7:20.52:0,21,212	0/0:35,0:13:23.92:0,24,265	0/0:21,0:21:28.40:0,28,297	0/1:14,0:13:3.36:3,0,69	0/0:21,0:17:5.90:0,6,133	0/0:16,0:7:12.08:0,12,64	0/1:11,0:10:3.64:4,0,78	0/1:22,2:24:59.11:509,0,59	0/1:23,0:23:99:311,0,172	0/0:22,0:21:10.22:0,10,262	0/0:18,0:16:19.38:0,19,263	0/1:17,0:17:10.31:10,0,107	0/1:14,0:14:1.47:1,0,205	0/1:16,0:15:37.52:38,0,81	0/0:41,0:37:78.62:0,79,1108	0/0:25,0:24:65:0,65,794	0/1:19,12:23:58.18:580,0,58	0/1:27,3:30:71.95:603,0,72	0/1:8,0:6:6.59:63,0,7	0/0:24,0:22:20.89:0,21,323	0/0:18,0:15:32.63:0,33,274	0/0:12,0:12:5.95:0,6,50	0/1:30,0:28:51.35:51,0,139	0/1:23,1:21:47.36:502,0,47	0/1:35,1:35:70.15:978,0,70	0/0:6,0:4:12.03:0,12,142
chr10	94944234	.	CTT	C	636.39	PASS	AB=0.857;AC=9;AF=0.161;AN=56;BaseQRankSum=9.317;DP=605;FS=5.129;HRun=2;HaplotypeScore=196.5596;InbreedingCoeff=-0.0303;MQ=45.81;MQ0=42;MQRankSum=-5.665;QD=3.07;ReadPosRankSum=3.357;VQSLOD=-0.3733;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:41.53:0,42,532	0/0:4,0:4:5.65:0,6,17	0/1:31,0:7:1.51:2,0,148	0/0:30,0:11:15.34:0,15,200	0/0:22,0:22:53.39:0,53,617	0/0:19,0:18:45.16:0,45,387	0/0:25,0:17:36.65:0,37,316	0/0:16,0:7:11.83:0,12,89	0/0:11,0:10:18.63:0,19,159	0/1:21,4:25:95.42:95,0,309	0/1:20,3:23:10.38:10,0,338	0/0:23,0:22:64.88:0,65,784	0/0:18,0:16:38.50:0,38,440	0/0:18,0:18:36.68:0,37,372	0/0:15,0:15:43.83:0,44,482	0/0:17,0:16:41.28:0,41,305	0/0:40,0:36:86.27:0,86,1263	0/0:24,0:22:61.55:0,62,845	0/1:27,4:22:99:156,0,103	0/1:21,8:29:99:105,0,300	1/1:6,1:5:0.67:9,1,0	0/0:25,0:22:48.76:0,49,636	0/0:18,0:15:34.01:0,34,549	0/0:13,0:13:16.37:0,16,170	0/0:31,0:29:52.50:0,53,495	0/1:20,7:24:99:163,0,257	0/1:25,9:33:99:224,0,170	0/0:6,0:4:12.04:0,12,173
chr10	94945419	.	GT	G	6037.41	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.044;DP=770;FS=0.670;HRun=2;HaplotypeScore=78.8169;InbreedingCoeff=0.9999;MQ=86.97;MQ0=0;MQRankSum=-1.686;QD=35.72;ReadPosRankSum=4.762;VQSLOD=5.2523;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,150,2218	1/1:0,19:19:48.16:623,48,0	0/0:28,0:28:81.23:0,81,1168	0/0:26,0:26:75.18:0,75,1035	1/1:0,33:33:93.30:1208,93,0	0/0:23,0:23:69.22:0,69,1014	0/0:16,0:16:48.16:0,48,719	0/0:26,0:26:78.25:0,78,1133	1/1:0,28:28:84.27:1090,84,0	0/0:35,0:35:99:0,99,1467	0/0:12,0:12:36.11:0,36,519	0/0:27,0:27:81.27:0,81,1190	0/0:26,0:26:78.26:0,78,1168	0/0:22,0:22:66.20:0,66,962	1/1:0,31:31:84.27:1091,84,0	1/1:1,32:33:81.26:1052,81,0	0/0:43,0:43:99:0,123,1843	0/0:17,0:17:51.17:0,51,764	0/0:22,0:22:66.22:0,66,990	0/0:28,0:28:84.28:0,84,1259	0/0:38,0:38:99:0,114,1653	0/0:29,0:29:87.29:0,87,1299	0/0:23,0:23:69.23:0,69,1028	0/0:43,0:43:99:0,126,1830	1/1:0,25:25:75.24:974,75,0	0/0:29,0:29:84.26:0,84,1222	0/0:24,0:24:72.24:0,72,1078	0/0:12,0:12:36.12:0,36,540
chr10	94945716	.	GT	G	13941.61	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=15.984;DP=704;FS=11.785;HRun=7;HaplotypeScore=117.8239;InbreedingCoeff=0.9992;MQ=76.10;MQ0=0;MQRankSum=-2.730;QD=26.30;ReadPosRankSum=1.313;VQSLOD=3.5891;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:70,0:70:99:0,202,2487	1/1:0,9:9:27.06:275,27,0	0/0:18,0:18:44.80:0,45,477	0/0:17,0:17:35.67:0,36,390	1/1:1,20:21:60.14:612,60,0	1/1:1,30:31:74.85:765,75,0	1/1:4,26:30:54.12:551,54,0	1/1:6,33:39:99:997,99,0	1/1:1,24:25:66.02:673,66,0	1/1:4,17:21:51.05:507,51,0	1/1:0,20:20:54.08:538,54,0	1/1:3,15:18:39.08:398,39,0	1/1:1,21:22:57.13:582,57,0	1/1:1,23:24:63.14:643,63,0	1/1:0,28:28:69.16:704,69,0	1/1:1,17:18:48.11:490,48,0	0/0:48,0:48:99:0,141,1746	0/0:21,0:21:57.18:0,57,716	1/1:3,20:23:60.12:606,60,0	1/1:0,22:22:60.13:610,60,0	1/1:0,18:18:48.11:490,48,0	1/1:1,18:19:54.12:550,54,0	1/1:2,23:25:68.87:687,69,0	1/1:1,28:29:75.17:765,75,0	1/1:2,20:22:60.14:612,60,0	1/1:2,24:26:72.13:725,72,0	1/1:0,30:30:90.21:918,90,0	1/1:2,8:10:24.05:245,24,0
chr10	94945981	.	A	ATT	10479.15	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-1.442;DP=565;FS=3.754;HRun=9;HaplotypeScore=78.3934;InbreedingCoeff=0.9423;MQ=76.64;MQ0=0;MQRankSum=-1.112;QD=22.98;ReadPosRankSum=0.301;VQSLOD=4.3116;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:93.10:0,93,966	1/1:0,9:9:27.09:416,27,0	0/0:18,0:18:38.89:0,39,387	0/0:10,0:10:5.14:0,5,78	1/1:2,20:23:60.20:924,60,0	1/1:2,14:19:44.12:618,44,0	1/1:3,15:19:30.10:444,30,0	1/1:4,0:33:44.47:248,44,0	1/1:2,13:15:39.13:600,39,0	1/1:4,0:17:33.12:130,33,0	1/1:4,0:22:11:105,11,0	1/1:0,14:14:36.12:554,36,0	1/1:3,13:16:26.75:415,27,0	1/1:1,20:21:57.19:877,57,0	1/1:4,23:30:62.18:895,62,0	1/1:1,17:19:44.64:655,45,0	0/0:34,0:34:99:0,102,1076	0/0:10,0:10:30.05:0,30,309	1/1:2,0:20:44.67:154,45,0	1/1:4,0:26:21.21:150,21,0	1/1:2,0:20:39.93:137,40,0	1/1:1,16:17:48.16:739,48,0	1/1:2,13:16:42.09:603,42,0	1/1:2,18:20:48.16:731,48,0	1/1:2,13:15:36.12:554,36,0	1/1:4,0:28:59.69:221,60,0	1/1:1,0:34:82.35:282,82,0	1/1:0,0:3:7.49:26,7,0
chr10	94946363	.	CAAA	C	1672.56	PASS	AB=0.990;AC=19;AF=0.339;AN=56;BaseQRankSum=7.057;DP=461;FS=2.656;HRun=11;HaplotypeScore=107.2804;InbreedingCoeff=0.7350;MQ=76.86;MQ0=3;MQRankSum=0.911;QD=9.45;ReadPosRankSum=1.951;VQSLOD=0.6129;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.28:0,84,1652	0/1:3,0:3:3.08:3,0,12	0/1:22,0:13:12.74:13,0,203	0/0:12,0:10:3.02:0,3,78	0/0:20,0:20:22.04:0,22,198	1/1:18,2:20:27.49:296,27,0	1/1:12,0:12:11.17:186,11,0	0/1:32,0:33:13.54:14,0,131	0/0:15,0:15:37.43:0,37,228	0/0:15,0:15:36.12:0,36,522	0/0:14,0:14:36.10:0,36,497	1/1:14,4:18:36.39:392,36,0	1/1:11,0:11:6.61:108,7,0	1/1:16,2:18:39.28:346,39,0	0/0:10,0:11:13.86:0,14,74	0/0:12,0:12:27.42:0,27,168	0/0:32,0:33:96.31:0,96,1886	0/0:7,0:7:21.07:0,21,424	0/0:28,0:28:62.23:0,62,905	0/0:19,0:19:42.09:0,42,538	0/0:12,0:12:33.08:0,33,448	1/1:16,2:18:19.07:190,19,0	1/1:10,3:13:18.14:213,18,0	1/1:9,0:9:12.97:113,13,0	0/0:15,0:15:18.62:0,19,121	0/0:18,0:18:48.16:0,48,690	0/0:10,0:9:30.03:0,30,369	0/0:12,0:12:16.02:0,16,124
chr10	94947818	.	AAC	A	9803.36	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=7.710;DP=543;FS=12.429;HRun=0;HaplotypeScore=121.2219;InbreedingCoeff=0.6112;MQ=70.82;MQ0=4;MQRankSum=-9.171;QD=29.26;ReadPosRankSum=1.063;VQSLOD=6.0569;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:33.11:0,33,635	1/1:1,7:8:24.07:337,24,0	0/0:28,0:28:56.09:0,56,866	0/0:16,0:12:26.32:0,26,312	1/1:4,19:23:62.80:787,63,0	1/1:1,19:20:60.16:866,60,0	1/1:3,18:21:63.10:865,63,0	1/1:26,0:26:1.20:41,1,0	1/1:4,13:17:48.02:621,48,0	0/0:20,0:20:1.83:0,2,9	0/1:19,0:19:39.24:40,0,39	1/1:1,17:18:51.17:751,51,0	1/1:1,15:15:45.14:646,45,0	1/1:2,8:9:27.08:377,27,0	1/1:1,12:13:36.12:534,36,0	1/1:4,17:20:57.15:803,57,0	0/0:30,0:30:87.25:0,87,1550	0/0:25,0:25:69.20:0,69,1266	0/1:21,0:21:53.96:74,0,54	0/1:28,0:28:14.11:14,0,45	0/0:19,0:18:0.94:0,1,8	1/1:3,17:20:60.15:836,60,0	1/1:3,17:20:60.13:835,60,0	1/1:3,12:15:42.07:574,42,0	1/1:4,15:19:54.18:802,54,0	0/0:26,0:26:2.95:0,3,36	0/0:20,0:20:5.34:0,5,29	0/0:12,0:12:0.26:0,0,1
chr10	94947819	.	AC	A	9523.79	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=8.330;DP=539;FS=7.326;HRun=4;HaplotypeScore=110.9658;InbreedingCoeff=0.9588;MQ=70.12;MQ0=4;MQRankSum=-4.941;QD=22.20;ReadPosRankSum=0.275;VQSLOD=3.4344;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:33.11:0,33,446	1/1:8,0:8:20.27:110,20,0	0/0:26,1:27:13.53:0,14,486	0/0:14,0:12:4.25:0,4,192	1/1:23,0:23:56.59:301,57,0	1/1:20,0:20:57.96:311,58,0	1/1:21,0:21:61.26:355,61,0	1/1:0,26:26:75.22:886,75,0	1/1:16,0:16:37.88:221,38,0	1/1:0,20:20:57.17:679,57,0	1/1:0,18:19:47.84:496,48,0	1/1:17,0:17:49.03:260,49,0	1/1:16,0:15:43.57:242,44,0	1/1:10,0:9:26.23:161,26,0	1/1:13,0:13:34.80:187,35,0	1/1:21,0:20:52.36:298,52,0	0/0:30,0:30:81.20:0,81,1023	0/0:25,0:25:69.19:0,69,904	1/1:2,19:21:57.08:624,57,0	1/1:3,24:27:69.96:877,70,0	1/1:0,19:18:51.16:608,51,0	1/1:20,0:20:57.79:316,58,0	1/1:20,0:20:57.87:315,58,0	1/1:15,0:15:37.84:225,38,0	1/1:19,0:19:52.57:310,53,0	1/1:1,25:26:75.21:883,75,0	1/1:1,19:20:45.14:536,45,0	1/1:1,11:12:27.08:323,27,0
chr10	94947834	.	GAA	G	6238.03	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=12.329;DP=524;FS=3.131;HRun=9;HaplotypeScore=121.3462;InbreedingCoeff=0.9843;MQ=68.96;MQ0=2;MQRankSum=-14.494;QD=27.12;ReadPosRankSum=1.574;VQSLOD=4.4302;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.12:0,48,758	1/1:0,7:7:21.06:245,21,0	0/0:21,1:22:44.50:0,44,637	0/0:16,0:14:6.11:0,6,263	1/1:2,19:21:51.14:593,51,0	1/1:1,20:21:54.16:629,54,0	1/1:3,19:22:51.14:594,51,0	0/0:22,0:22:54.18:0,54,886	1/1:1,14:14:33.09:384,33,0	0/0:20,0:20:54.18:0,54,884	0/0:18,0:19:48.12:0,48,738	1/1:1,16:17:42.11:478,42,0	1/1:4,13:17:39.10:454,39,0	1/1:1,11:12:24.07:280,24,0	1/1:3,10:13:24.06:280,24,0	1/1:2,13:15:36.10:417,36,0	0/0:28,0:29:81.27:0,81,1306	0/0:27,0:27:66.23:0,66,1074	0/0:23,0:23:57.19:0,57,936	0/0:25,0:25:74.02:0,74,1157	0/0:19,0:18:39.13:0,39,640	1/1:3,19:22:51.13:594,51,0	1/1:4,15:19:45.12:524,45,0	1/1:2,11:13:27.07:314,27,0	1/1:3,13:16:39.10:454,39,0	0/0:23,0:23:63.22:0,63,1034	0/0:21,0:21:54.18:0,54,886	0/0:11,0:11:24.08:0,24,394
chr10	94947940	.	GCACA	G	680.04	PASS	AB=0.908;AC=11;AF=0.212;AN=52;BaseQRankSum=4.738;DP=473;FS=0.794;HRun=0;HaplotypeScore=113.0773;InbreedingCoeff=0.3133;MQ=57.02;MQ0=10;MQRankSum=-4.390;QD=7.16;ReadPosRankSum=-0.303;VQSLOD=2.6056;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:12.03:0,12,163	0/1:3,0:4:10.49:10,0,19	./.	./.	0/0:13,1:14:2.60:0,3,10	0/0:29,0:31:38.84:0,39,495	0/0:17,0:18:20.84:0,21,320	0/0:19,0:16:0:0,0,0	1/1:4,13:18:27.09:399,27,0	0/0:19,0:19:12.01:0,12,146	0/0:14,0:14:14.99:0,15,154	0/0:19,0:21:22.50:0,22,422	0/0:15,0:15:31.36:0,31,487	0/0:6,0:7:5.38:0,5,68	1/1:5,1:6:5.78:68,6,0	1/1:4,5:10:9.02:121,9,0	0/0:24,0:23:32.22:0,32,473	0/0:25,0:25:35.26:0,35,516	0/1:10,0:9:33.19:36,0,33	0/0:10,0:10:15.70:0,16,165	0/0:42,0:42:28.27:0,28,372	0/0:11,0:10:5.75:0,6,61	0/0:12,0:14:18.31:0,18,179	0/0:30,0:35:42.11:0,42,574	0/1:18,2:23:28.59:116,0,29	0/1:13,0:13:65.90:66,0,299	0/1:10,0:11:9.41:9,0,241	0/0:3,0:3:2.04:0,2,6
chr10	94948031	.	CT	C	331.08	PASS	AB=0.816;AC=10;AF=0.179;AN=56;BaseQRankSum=-4.956;DP=472;FS=4.156;HRun=16;HaplotypeScore=102.6734;InbreedingCoeff=0.0690;MQ=62.56;MQ0=6;MQRankSum=2.391;QD=1.98;ReadPosRankSum=2.084;VQSLOD=-0.0593;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,17:25:12.32:107,0,12	0/1:6,1:11:0.54:1,0,63	0/0:20,0:14:14.53:0,15,90	0/0:5,0:5:5.12:0,5,20	0/0:16,0:20:40.74:0,41,225	0/0:6,0:18:29.17:0,29,139	0/0:11,0:16:33.78:0,34,199	0/1:32,6:37:58.30:58,0,201	0/0:13,0:13:18.13:0,18,81	0/1:10,0:9:0.04:0,0,107	0/1:9,5:15:62.05:62,0,72	0/0:6,0:17:23.20:0,23,114	0/0:14,0:15:22.21:0,22,110	0/0:7,0:10:18.78:0,19,96	0/0:2,0:9:4.88:0,5,21	0/0:11,0:14:23.61:0,24,119	0/1:10,12:24:8.45:107,0,8	1/1:5,9:15:19.14:105,19,0	0/1:14,1:15:10.30:10,0,129	0/0:9,0:9:14.83:0,15,115	0/0:16,2:22:4.52:0,5,196	0/0:12,0:17:27.57:0,28,164	0/0:9,0:17:35.18:0,35,197	0/0:15,0:23:25.76:0,26,130	0/0:11,0:17:40.80:0,41,219	0/0:20,1:23:35.19:0,35,298	0/0:11,0:11:12.96:0,13,98	0/1:10,2:11:18.07:18,0,79
chr10	94948728	.	TCA	T	7296.10	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.355;DP=593;FS=3.907;HRun=0;HaplotypeScore=69.3837;InbreedingCoeff=0.9796;MQ=80.22;MQ0=1;MQRankSum=-0.661;QD=40.53;ReadPosRankSum=2.256;VQSLOD=6.7043;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:69.21:0,69,1257	0/0:2,0:2:6.02:0,6,103	0/0:19,0:19:48.13:0,48,849	0/0:10,0:10:27.09:0,27,468	0/0:40,0:40:99:0,120,2196	1/1:1,27:28:75.25:1104,75,0	1/1:1,11:12:30.10:442,30,0	1/1:0,26:26:78.24:1110,78,0	0/0:20,0:20:60.21:0,60,1108	0/0:32,0:32:84.29:0,84,1546	0/0:21,0:21:57.18:0,57,1036	1/1:2,21:23:63.21:928,63,0	1/1:0,22:22:63.21:928,63,0	1/1:1,13:14:39.13:574,39,0	0/0:25,0:25:75.26:0,75,1393	0/0:26,0:26:75.24:0,75,1374	0/0:25,0:25:75.22:0,75,1330	0/0:19,0:19:54.14:0,54,959	0/0:20,0:20:57.20:0,57,1067	0/0:30,0:30:87.28:0,87,1598	0/0:11,0:10:33.05:0,33,548	1/1:0,16:15:39.13:574,39,0	1/1:0,21:21:57.19:840,57,0	1/1:0,14:14:42.14:619,42,0	0/0:29,0:29:84.28:0,84,1527	0/0:23,0:23:69.23:0,69,1254	0/0:37,0:37:99:0,108,2004	1/1:0,4:4:12.04:177,12,0
chr10	94949578	.	C	CACATGCTTATA	52732.39	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=4.543;DP=787;FS=2.265;HRun=0;HaplotypeScore=266.0244;InbreedingCoeff=0.9935;MQ=65.06;MQ0=0;MQRankSum=-21.392;QD=119.03;ReadPosRankSum=-2.214;VQSLOD=4.4825;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,123,4168	1/1:7,9:16:45.15:2257,45,0	0/0:22,0:22:63.19:0,63,1950	0/0:18,0:17:45.11:0,45,1329	1/1:23,20:43:99:4431,111,0	1/1:9,15:26:54.18:2741,54,0	1/1:17,12:31:78.27:3407,78,0	1/1:33,2:37:83.11:3714,83,0	1/1:17,12:29:69.23:3433,69,0	0/0:32,0:32:84.29:0,84,2915	0/0:27,0:27:78.25:0,78,2553	1/1:12,21:38:93.28:4434,93,0	1/1:14,15:33:81.28:4353,81,0	1/1:10,17:29:78.27:3794,78,0	1/1:18,9:27:75.26:3498,75,0	1/1:14,9:23:66.23:3204,66,0	0/0:24,0:24:72.25:0,72,2456	0/0:23,0:23:32.75:0,33,2013	0/0:23,0:23:63.22:0,63,2163	0/0:30,0:30:84.27:0,84,2596	0/0:41,0:41:99:0,117,3978	1/1:13,23:36:99:4761,102,0	1/1:14,20:35:96.33:4358,96,0	1/1:6,2:10:12.04:677,12,0	1/1:14,11:25:69.19:2937,69,0	0/0:31,0:31:87.30:0,87,2977	0/0:26,0:26:75.26:0,75,2487	1/1:3,2:5:15.05:733,15,0
chr10	94949595	.	GA	G	4797.90	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.166;DP=738;FS=1.173;HRun=1;HaplotypeScore=223.2534;InbreedingCoeff=0.9982;MQ=68.59;MQ0=0;MQRankSum=-11.050;QD=35.28;ReadPosRankSum=2.945;VQSLOD=4.3393;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,103,1643	1/1:0,14:14:39.13:539,39,0	0/0:30,0:29:80.46:0,80,1264	0/0:23,0:22:63.21:0,63,992	1/1:0,37:37:72.14:924,72,0	0/0:22,0:22:60.20:0,60,952	0/0:26,0:26:75.20:0,75,1143	0/0:33,0:33:99:0,99,1513	1/1:0,24:24:66.22:921,66,0	0/0:33,0:33:99:0,99,1540	0/0:27,0:27:81.25:0,81,1270	0/0:31,0:31:93.32:0,93,1462	0/0:27,0:27:78.21:0,78,1213	0/0:27,0:27:75.20:0,75,1149	1/1:0,21:21:60.20:829,60,0	1/1:0,21:21:57.19:791,57,0	0/0:27,0:27:81.23:0,81,1242	0/0:21,0:21:63.15:0,63,946	0/0:19,0:19:57.19:0,57,908	0/0:27,0:27:78.21:0,78,1169	0/0:44,0:44:99:0,132,2082	0/0:37,0:37:99:0,108,1688	0/0:29,0:29:57.16:0,57,1110	0/0:16,0:16:30.10:0,30,463	1/1:0,19:19:57.19:795,57,0	0/0:34,0:34:99:0,102,1631	0/0:25,0:25:75.24:0,75,1160	0/0:6,0:6:18.02:0,18,259
chr10	94950547	.	G	GTT	4510.37	PASS	AB=0.634;AC=30;AF=0.536;AN=56;BaseQRankSum=0.275;DP=576;FS=3.623;HRun=14;HaplotypeScore=88.4340;InbreedingCoeff=0.7246;MQ=76.97;MQ0=4;MQRankSum=-2.609;QD=15.83;ReadPosRankSum=-2.671;VQSLOD=3.6109;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:49:69.02:0,69,684	1/1:4,5:10:14.99:162,15,0	0/0:20,0:14:4.11:0,4,81	0/0:22,0:18:9.43:0,9,91	1/1:7,13:23:23.07:435,23,0	1/1:0,9:13:20.42:216,20,0	1/1:7,17:27:44.42:473,44,0	0/0:23,3:29:1.22:0,1,296	1/1:2,8:13:23.28:239,23,0	1/1:2,0:14:28.56:169,29,0	0/1:6,1:13:24.77:87,0,25	1/1:8,14:22:30.93:366,31,0	0/1:5,6:12:10.08:120,0,10	1/1:7,10:20:5.85:217,6,0	1/1:3,10:18:25.78:249,26,0	1/1:2,12:17:28.81:320,29,0	0/0:31,0:35:44.22:0,44,446	0/0:20,0:23:35.28:0,35,316	0/0:18,0:21:25.90:0,26,264	0/0:14,0:17:1.59:0,2,161	0/0:18,0:20:44.75:0,45,375	1/1:5,15:23:47.44:548,47,0	1/1:4,7:12:20.43:235,20,0	1/1:6,19:29:33.09:417,33,0	1/1:3,9:15:21.06:259,21,0	0/0:21,0:24:7.64:0,8,164	0/0:16,0:17:8.55:0,9,117	0/0:10,0:11:8.75:0,9,116
chr10	94950993	.	C	CGGG	993.51	PASS	AB=0.764;AC=28;AF=0.519;AN=54;BaseQRankSum=7.525;DP=444;FS=6.257;HRun=10;HaplotypeScore=130.3827;InbreedingCoeff=0.3936;MQ=82.52;MQ0=0;MQRankSum=-3.488;QD=3.96;ReadPosRankSum=-3.874;VQSLOD=-0.7018;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:18:9:93,9,0	0/0:9,0:9:14.98:0,15,181	0/0:18,0:17:22.01:0,22,278	0/1:15,0:16:5.22:5,0,72	0/0:12,0:15:13.26:0,13,118	0/1:7,0:11:10.38:10,0,49	0/1:11,0:17:12.34:12,0,78	1/1:4,0:8:1.25:3,1,0	0/0:24,0:24:35.82:0,36,408	1/1:15,1:16:3.01:38,3,0	./.	0/0:8,0:14:0.56:0,1,63	0/1:15,0:22:23.38:153,0,23	1/1:11,0:21:6.71:32,7,0	0/0:22,0:22:10.87:0,11,363	0/0:15,0:18:29.75:0,30,391	0/0:32,0:36:60.04:0,60,691	1/1:6,0:16:5.60:14,6,0	1/1:12,0:12:5.91:40,6,0	0/0:10,5:17:1.28:0,1,3	1/1:8,0:8:9:94,9,0	1/1:3,0:8:4.05:11,4,0	0/1:8,0:14:1.05:1,0,12	0/1:9,0:19:12.05:12,0,25	0/0:16,0:16:11.80:0,12,126	1/1:13,0:13:9.01:114,9,0	1/1:29,0:29:33.07:467,33,0	1/1:3,0:3:6:68,6,0
chr10	94951532	.	GAA	G	11053.29	PASS	AB=0.632;AC=37;AF=0.661;AN=56;BaseQRankSum=-2.897;DP=659;FS=1.491;HRun=11;HaplotypeScore=93.2026;InbreedingCoeff=0.9135;MQ=73.85;MQ0=1;MQRankSum=-0.756;QD=24.62;ReadPosRankSum=3.037;VQSLOD=4.9618;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:81.23:0,81,1215	1/1:1,11:12:33.08:351,33,0	0/0:13,0:12:9.03:0,9,132	0/0:13,0:13:23.01:0,23,226	1/1:3,19:22:48.07:510,48,0	1/1:6,23:29:53.85:555,54,0	1/1:0,16:16:48.12:511,48,0	1/1:7,23:30:69.11:717,69,0	1/1:2,18:20:51.11:543,51,0	1/1:3,30:33:90.21:951,90,0	1/1:2,22:25:59.78:617,60,0	1/1:2,20:22:57.14:606,57,0	1/1:1,26:27:66.16:702,66,0	1/1:5,13:18:36.06:383,36,0	1/1:4,28:32:69.15:734,69,0	1/1:2,26:28:75.18:798,75,0	0/0:26,0:31:88.74:0,89,1213	0/0:23,0:23:54.18:0,54,812	0/0:6,0:20:40.93:0,41,171	0/0:5,1:23:20.32:0,20,177	0/1:5,1:12:13.45:13,0,50	1/1:4,14:18:39.06:413,39,0	1/1:6,30:36:87.19:924,87,0	1/1:1,18:19:48.10:511,48,0	1/1:5,26:31:75.16:798,75,0	0/0:3,0:26:57.76:0,58,211	0/0:1,0:29:57.21:0,57,197	1/1:2,16:18:39.06:415,39,0
chr10	94956244	.	T	TA	6690.82	PASS	AB=0.606;AC=41;AF=0.732;AN=56;BaseQRankSum=0.323;DP=564;FS=4.228;HRun=11;HaplotypeScore=79.4466;InbreedingCoeff=0.8437;MQ=66.79;MQ0=0;MQRankSum=1.276;QD=16.44;ReadPosRankSum=-2.496;VQSLOD=4.9021;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,122,921	1/1:3,0:14:31.28:160,31,0	0/0:10,0:9:2.96:0,3,23	0/0:4,0:4:5.96:0,6,43	1/1:14,0:23:44.23:242,44,0	1/1:6,14:20:45.03:444,45,0	1/1:14,10:24:24.74:412,25,0	0/0:29,0:30:61.76:0,62,468	1/1:13,0:22:47.57:289,48,0	1/1:9,13:23:33.60:377,34,0	1/1:7,7:15:32.14:291,32,0	1/1:13,10:23:40.63:383,41,0	1/1:8,7:15:27.03:263,27,0	1/1:10,8:18:33:308,33,0	1/1:12,0:20:45.60:277,46,0	1/1:9,2:22:49.22:307,49,0	0/0:30,0:30:77.66:0,78,604	0/0:18,0:20:46.82:0,47,349	1/1:0,6:7:20.86:186,21,0	1/1:2,19:21:45.05:446,45,0	1/1:4,13:17:27.05:274,27,0	1/1:6,10:16:9.82:275,10,0	1/1:4,21:25:48.10:487,48,0	1/1:3,11:15:38.90:374,39,0	1/1:5,2:22:48.98:270,49,0	1/1:8,17:25:42.06:418,42,0	0/1:7,13:20:56.85:207,0,57	0/0:11,0:11:14.85:0,15,115
chr10	94956321	.	GGA	G	7626.49	PASS	AB=0.984;AC=38;AF=0.679;AN=56;BaseQRankSum=0.208;DP=494;FS=6.327;HRun=0;HaplotypeScore=81.0641;InbreedingCoeff=0.3216;MQ=72.34;MQ0=0;MQRankSum=2.555;QD=18.29;ReadPosRankSum=1.871;VQSLOD=4.2216;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:15.27:35,15,0	0/1:9,0:9:2.71:3,0,20	0/1:11,1:10:28.96:29,0,226	0/0:10,0:7:11.83:0,12,121	0/1:19,1:20:9.51:136,0,10	1/1:0,21:21:57.19:841,57,0	1/1:0,28:28:66.22:987,66,0	1/1:1,36:37:99:1267,102,0	1/1:23,0:23:7.55:23,8,0	0/1:15,0:15:20.54:21,0,176	0/1:10,0:10:27.75:28,0,110	1/1:0,19:19:36.12:539,36,0	1/1:3,21:24:51.17:761,51,0	1/1:0,23:23:48.16:717,48,0	1/1:20,0:20:14.92:35,15,0	1/1:18,0:18:12.38:28,12,0	0/0:15,0:15:33.32:0,33,698	0/0:22,0:22:63.19:0,63,1160	0/0:12,0:12:2.23:0,2,161	0/1:8,0:8:24.77:25,0,80	0/1:7,0:7:32.52:33,0,76	1/1:2,7:9:27.02:375,27,0	1/1:5,12:17:44.22:625,44,0	1/1:0,17:17:39.13:583,39,0	1/1:16,0:16:9.92:81,10,0	0/1:22,0:22:93.94:94,0,239	0/0:18,0:18:25.01:0,25,355	1/1:2,9:11:25.63:362,26,0
chr10	94956322	.	GA	G	6346.02	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=4.071;DP=487;FS=8.096;HRun=2;HaplotypeScore=76.8063;InbreedingCoeff=0.2906;MQ=72.69;MQ0=0;MQRankSum=-1.915;QD=14.46;ReadPosRankSum=-0.189;VQSLOD=3.6028;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:42.14:542,42,0	1/1:1,8:9:15.05:189,15,0	0/1:12,0:10:3.13:3,0,129	0/0:9,0:7:11.89:0,12,112	1/1:2,18:20:50.79:530,51,0	1/1:21,0:21:54.41:291,54,0	1/1:28,0:28:63.86:350,64,0	1/1:36,1:37:96.17:590,96,0	1/1:0,22:22:39.13:502,39,0	0/1:14,0:14:23.14:81,0,23	0/1:10,0:10:24.55:32,0,25	1/1:19,0:19:34.83:191,35,0	1/1:21,2:23:49.46:282,49,0	1/1:23,0:23:46.41:254,46,0	1/1:0,19:19:42.14:542,42,0	1/1:0,18:18:36.12:463,36,0	0/0:17,0:17:45.08:0,45,561	0/0:22,0:22:63.16:0,63,848	0/1:11,0:11:22.77:48,0,23	0/1:7,0:7:14.29:29,0,14	0/1:7,0:7:16.15:55,0,16	1/1:10,0:11:26.11:143,26,0	1/1:15,0:16:46.67:276,47,0	1/1:18,0:18:38.62:208,39,0	1/1:8,7:15:38.93:421,39,0	0/1:21,0:21:46.66:151,0,47	0/1:17,0:17:8.55:9,0,93	1/1:10,1:11:26.23:164,26,0
chr10	94956924	.	A	AT	15240.08	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-12.327;DP=683;FS=0.378;HRun=8;HaplotypeScore=64.0619;InbreedingCoeff=0.9866;MQ=79.48;MQ0=0;MQRankSum=-2.250;QD=28.12;ReadPosRankSum=1.885;VQSLOD=5.2103;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:84.03:0,84,769	1/1:0,8:9:27.08:308,27,0	0/0:17,0:17:41.90:0,42,368	0/0:19,0:20:18.63:0,19,282	1/1:1,26:27:75.11:822,75,0	1/1:2,13:15:36.11:415,36,0	1/1:4,16:20:38.91:447,39,0	1/1:5,23:28:69.20:796,69,0	1/1:4,18:22:45.13:519,45,0	1/1:5,17:22:57.16:644,57,0	1/1:1,12:13:11.65:388,12,0	1/1:3,28:31:56.78:907,57,0	1/1:1,31:32:87.26:1004,87,0	1/1:2,17:19:45.13:519,45,0	1/1:2,45:47:99:1385,120,0	1/1:4,29:33:81.24:934,81,0	0/0:46,0:46:99:0,123,1100	0/0:22,0:24:61.10:0,61,534	1/1:8,19:27:57.97:620,58,0	1/1:1,15:16:42.12:485,42,0	1/1:2,25:27:75.21:855,75,0	1/1:4,20:24:54.16:623,54,0	1/1:2,14:16:36.11:416,36,0	1/1:2,20:23:53.99:603,54,0	1/1:4,26:30:47.80:804,48,0	1/1:2,29:31:84.25:969,84,0	1/1:2,18:21:53.99:603,54,0	1/1:1,8:9:15.04:173,15,0
chr10	94957374	.	TAGGG	T	15498.23	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-7.222;DP=802;FS=8.446;HRun=0;HaplotypeScore=166.3477;InbreedingCoeff=1.0000;MQ=85.77;MQ0=0;MQRankSum=-7.611;QD=56.98;ReadPosRankSum=2.489;VQSLOD=6.3074;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,169,4655	0/0:16,0:16:45.15:0,45,933	0/0:29,0:30:89.78:0,90,2242	0/0:25,0:25:72.22:0,72,1801	0/0:25,0:25:75.24:0,75,1547	1/1:0,21:21:63.22:1320,63,0	1/1:0,36:36:90.31:1885,90,0	1/1:0,30:30:90.30:1834,90,0	0/0:18,0:18:54.15:0,54,1042	0/0:28,0:28:78.27:0,78,1511	0/0:20,0:20:57.18:0,57,1153	1/1:0,39:39:99:2127,102,0	1/1:0,25:25:72.25:1509,72,0	1/1:0,28:28:69.24:1436,69,0	0/0:37,0:37:99:0,111,2185	0/0:33,0:33:99:0,99,2007	0/0:43,0:43:99:0,129,3631	0/0:25,0:25:75.26:0,75,2173	0/0:27,0:27:81.26:0,81,1579	0/0:33,0:33:96.77:0,97,1936	0/0:33,0:33:99:0,99,1975	1/1:0,32:32:90.31:1879,90,0	1/1:1,23:24:69.24:1446,69,0	1/1:0,25:25:66.23:1370,66,0	0/0:25,0:25:72.25:0,72,1500	0/0:33,0:33:96.33:0,96,1905	0/0:23,0:23:60:0,60,1290	1/1:0,12:12:33.11:692,33,0
chr10	94958321	.	G	GA	2689.21	PASS	AB=0.701;AC=20;AF=0.357;AN=56;BaseQRankSum=-8.176;DP=404;FS=0.510;HRun=9;HaplotypeScore=49.6192;InbreedingCoeff=0.7644;MQ=80.77;MQ0=0;MQRankSum=-0.877;QD=18.68;ReadPosRankSum=-0.275;VQSLOD=3.5315;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:74.98:0,75,651	0/0:2,0:2:6:0,6,52	0/0:30,0:16:21.20:0,21,154	0/0:26,0:21:18.83:0,19,210	0/0:13,0:13:35.99:0,36,312	1/1:3,16:19:36.10:398,36,0	1/1:2,14:16:16.06:404,16,0	1/1:3,11:14:6.70:257,7,0	0/0:9,0:9:17.98:0,18,156	0/0:11,0:11:26.98:0,27,231	0/0:12,1:13:5.79:0,6,275	1/1:3,13:16:33.09:365,33,0	1/1:4,15:19:39.10:425,39,0	0/1:4,10:14:1.93:208,0,2	0/0:15,0:15:41.99:0,42,365	0/0:15,0:15:41.99:0,42,364	0/0:19,0:19:50.94:0,51,436	0/0:36,0:36:92.96:0,93,807	0/0:6,0:6:18:0,18,156	0/0:10,0:10:20.66:0,21,178	0/1:7,2:9:39.36:39,0,155	1/1:0,1:1:3.01:33,3,0	1/1:0,7:7:17.94:199,18,0	1/1:6,20:27:50.97:545,51,0	0/0:8,0:8:14.99:0,15,130	0/0:6,0:6:15:0,15,130	0/0:13,0:13:29.99:0,30,260	1/1:2,0:2:2.80:13,3,0
chr10	94959317	.	TTGGATGGA	T	8932.09	PASS	AB=0.726;AC=38;AF=0.731;AN=52;BaseQRankSum=-1.576;DP=653;FS=2.243;HRun=0;HaplotypeScore=178.6842;InbreedingCoeff=0.6949;MQ=73.10;MQ0=13;MQRankSum=-7.914;QD=19.89;ReadPosRankSum=-0.843;VQSLOD=4.1429;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:27:29.93:314,0,30	1/1:8,4:12:12.04:285,12,0	./.	./.	1/1:19,8:26:18.06:362,18,0	1/1:9,13:22:27.09:621,27,0	1/1:15,3:17:6.02:148,6,0	0/0:16,0:13:3.01:0,3,50	1/1:4,0:12:18.06:335,18,0	0/0:16,0:21:17.97:0,18,150	0/0:13,0:24:29.96:0,30,256	1/1:11,16:27:39.13:937,39,0	1/1:14,7:21:12.04:297,12,0	1/1:9,7:16:21.07:507,21,0	1/1:27,14:41:45.15:1088,45,0	1/1:7,13:19:33.11:800,33,0	0/0:13,0:26:23.88:0,24,188	0/0:29,0:29:48.16:0,48,1771	1/1:8,3:11:9.03:187,9,0	1/1:13,11:24:27.06:546,27,0	1/1:9,2:11:3.01:74,3,0	1/1:18,10:27:18.06:428,18,0	1/1:10,9:19:14.68:301,15,0	1/1:18,7:24:6.02:149,6,0	1/1:16,10:26:18.06:433,18,0	0/1:20,7:27:3.40:273,0,3	1/1:16,18:34:35.97:845,36,0	0/0:2,0:11:11.97:0,12,97
chr10	94959432	.	AACACACACAC	A	1287.47	PASS	AB=0.897;AC=19;AF=0.365;AN=52;BaseQRankSum=6.490;DP=480;FS=7.157;HRun=0;HaplotypeScore=138.4741;InbreedingCoeff=0.4227;MQ=70.32;MQ0=11;MQRankSum=-4.664;QD=6.71;ReadPosRankSum=-0.096;VQSLOD=2.1730;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:24.19:0,24,620	1/1:3,0:4:3.01:70,3,0	./.	./.	1/1:18,4:22:5.90:38,6,0	0/0:17,0:17:27.09:0,27,1084	0/0:15,0:15:9.03:0,9,345	0/0:15,0:14:0:0,0,0	1/1:13,5:19:9.03:234,9,0	0/0:18,0:17:27.56:0,28,930	0/0:8,0:7:6.02:0,6,212	0/0:12,0:12:18.06:0,18,670	0/0:12,0:12:9.03:0,9,294	0/0:14,0:14:18.06:0,18,771	1/1:12,5:18:9.02:209,9,0	1/1:7,2:9:3.01:86,3,0	0/0:15,0:15:21.07:0,21,517	0/0:13,0:13:18.93:0,19,476	0/1:8,0:10:12.22:131,0,12	0/1:13,1:15:62.66:143,0,63	0/1:29,0:28:17.54:18,0,79	0/0:19,0:18:21.53:0,22,717	0/0:17,0:17:6.02:0,6,156	0/0:15,0:23:24.08:0,24,715	1/1:13,3:16:17.56:235,18,0	0/1:22,0:22:24.11:24,0,101	0/1:13,0:17:5.80:131,0,6	1/1:8,0:9:6.02:140,6,0
chr10	94961955	.	AAC	A	1259.08	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.849;DP=660;FS=1.398;HRun=0;HaplotypeScore=75.3150;InbreedingCoeff=0.9952;MQ=83.48;MQ0=0;MQRankSum=-0.597;QD=30.71;ReadPosRankSum=-2.694;VQSLOD=4.6532;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.10:0,48,783	0/0:12,0:12:36.12:0,36,660	0/0:22,0:22:63.20:0,63,1053	0/0:18,0:18:38.68:0,39,711	0/0:44,0:44:99:0,129,2306	0/0:24,0:24:60.21:0,60,1085	0/0:25,0:25:69.24:0,69,1265	1/1:5,28:33:81.25:1124,81,0	0/0:14,0:14:42.14:0,42,760	0/0:35,0:35:99:0,102,1770	0/0:29,0:29:87.30:0,87,1579	0/0:20,0:20:57.20:0,57,1045	0/0:28,0:28:84.27:0,84,1509	0/0:20,0:20:60.21:0,60,1099	0/0:29,0:29:87.30:0,87,1555	0/0:22,0:22:63.22:0,63,1149	0/0:18,0:18:54.19:0,54,990	0/0:25,0:25:69.24:0,69,1248	0/0:18,0:18:51.17:0,51,931	0/0:43,0:43:99:0,129,2355	0/0:10,0:10:27.07:0,27,462	0/0:29,0:29:84.29:0,84,1529	0/0:20,0:20:60.17:0,60,1064	0/0:17,0:17:48.16:0,48,880	0/0:26,0:26:75.23:0,75,1305	0/0:28,0:28:84.29:0,84,1530	0/0:26,0:26:78.27:0,78,1414	1/1:1,7:8:18.06:255,18,0
chr10	94963281	.	GA	G	5478.38	PASS	AB=0.763;AC=44;AF=0.786;AN=56;BaseQRankSum=6.741;DP=569;FS=15.303;HRun=13;HaplotypeScore=91.7131;InbreedingCoeff=0.6801;MQ=68.78;MQ0=5;MQRankSum=-2.071;QD=12.68;ReadPosRankSum=3.555;VQSLOD=3.4051;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,21:29:5.37:301,5,0	1/1:3,4:7:17.83:126,18,0	0/0:41,1:10:16.67:0,17,102	0/0:35,0:21:9.10:0,9,88	1/1:8,16:26:24.46:336,24,0	1/1:3,12:15:0.65:168,1,0	1/1:1,15:16:29.83:219,30,0	0/1:27,3:32:18.93:19,0,435	1/1:9,8:20:41.86:276,42,0	1/1:11,14:25:50.56:368,51,0	1/1:10,11:21:24.42:330,24,0	0/1:4,6:11:38.42:73,0,38	1/1:3,14:17:26.76:197,27,0	1/1:1,10:11:23.86:175,24,0	1/1:5,13:18:52.12:366,52,0	1/1:4,10:14:32.80:240,33,0	0/0:23,0:25:59.58:0,60,527	0/0:16,0:19:44.69:0,45,396	1/1:14,8:23:40.75:287,41,0	1/1:11,12:24:16.07:278,16,0	1/1:2,0:3:5.02:28,5,0	1/1:8,13:22:11.35:239,11,0	1/1:4,10:17:29.16:182,29,0	1/1:4,16:20:18.54:299,19,0	1/1:9,9:18:30.73:313,31,0	1/1:5,12:18:43.77:310,44,0	1/1:7,14:24:52.82:349,53,0	0/0:13,0:14:35.88:0,36,330
chr10	94963294	.	AC	A	925.11	PASS	AB=0.982;AC=27;AF=0.482;AN=56;BaseQRankSum=13.081;DP=561;FS=4.243;HRun=1;HaplotypeScore=110.9422;InbreedingCoeff=0.5388;MQ=72.21;MQ0=5;MQRankSum=-5.390;QD=3.13;ReadPosRankSum=4.220;VQSLOD=0.3320;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,1:27:40.02:40,0,86	1/1:7,0:7:8.68:44,9,0	0/0:43,3:14:16.04:0,16,107	0/0:35,1:23:11.15:0,11,110	1/1:26,0:26:35.11:149,35,0	0/0:18,0:18:26.02:0,26,171	0/0:16,0:16:15.45:0,15,56	0/0:27,0:27:61.13:0,61,567	1/1:15,0:15:23.22:105,23,0	0/1:23,0:23:25.85:29,0,26	1/1:20,1:21:4.67:124,5,0	0/0:14,0:14:28.56:0,29,192	0/0:15,0:15:1.19:0,1,29	0/0:12,0:12:5.80:0,6,35	1/1:20,1:21:22.06:144,22,0	1/1:12,0:12:15.17:42,15,0	0/0:24,0:24:65.40:0,65,603	0/0:22,0:22:59.17:0,59,495	1/1:14,0:14:1.84:36,2,0	1/1:21,0:21:14.58:109,15,0	1/1:4,0:4:6.17:22,6,0	0/1:16,0:16:4.81:5,0,56	0/1:16,1:17:2.59:3,0,64	0/0:19,0:19:11.50:0,11,74	0/1:22,0:22:3.71:69,0,4	1/1:21,0:21:0.89:63,1,0	1/1:29,0:28:19.64:134,20,0	0/0:15,0:14:38.90:0,39,379
chr10	94963302	.	AC	A	8359.24	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=9.440;DP=525;FS=5.977;HRun=1;HaplotypeScore=78.9086;InbreedingCoeff=0.9188;MQ=71.96;MQ0=2;MQRankSum=-1.630;QD=33.17;ReadPosRankSum=2.045;VQSLOD=4.5434;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:56.43:0,56,683	1/1:0,8:8:21.07:289,21,0	0/0:30,2:12:5.67:0,6,216	0/1:27,0:18:3.92:4,0,158	1/1:1,27:28:72.10:922,72,0	0/0:18,0:18:51.13:0,51,725	0/0:16,0:16:36.09:0,36,501	0/0:27,0:27:71.22:0,71,880	1/1:1,12:13:39.13:540,39,0	1/1:0,22:22:66.22:918,66,0	1/1:0,15:15:45.15:616,45,0	0/0:15,0:15:39.13:0,39,573	0/0:14,0:14:36.08:0,36,460	0/0:14,0:14:33.09:0,33,443	1/1:3,15:18:54.17:728,54,0	1/1:2,10:12:36.12:498,36,0	0/0:23,0:23:68.94:0,69,929	0/0:20,0:20:57.13:0,57,792	1/1:0,16:16:45.12:568,45,0	1/1:1,20:21:63.07:788,63,0	1/1:0,4:4:6.02:83,6,0	0/0:18,0:18:47.97:0,48,627	0/0:16,0:16:39.02:0,39,536	0/0:20,0:20:60.14:0,60,814	1/1:5,13:18:51.15:676,51,0	1/1:1,18:19:54.17:734,54,0	1/1:0,30:29:72.24:995,72,0	0/0:15,0:15:42.09:0,42,561
chr10	94963906	.	GAT	G	1658.18	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.074;DP=687;FS=3.764;HRun=0;HaplotypeScore=80.6324;InbreedingCoeff=0.9984;MQ=90.88;MQ0=0;MQRankSum=-3.677;QD=38.56;ReadPosRankSum=-3.045;VQSLOD=4.2862;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1982	0/0:9,0:9:27.09:0,27,498	0/0:27,0:27:78.26:0,78,1392	0/0:27,0:27:78.20:0,78,1356	0/0:27,0:27:81.28:0,81,1500	0/0:21,0:21:63.22:0,63,1180	0/0:27,0:27:78.23:0,78,1381	1/1:0,33:33:99:1426,99,0	0/0:22,0:22:63.20:0,63,1148	0/0:26,0:26:75.26:0,75,1395	0/0:23,0:23:66.23:0,66,1236	0/0:23,0:23:66.23:0,66,1212	0/0:25,0:25:75.26:0,75,1389	0/0:23,0:23:66.21:0,66,1203	0/0:34,0:34:99:0,99,1840	0/0:26,0:26:75.24:0,75,1356	0/0:20,0:20:57.18:0,57,1022	0/0:16,0:15:48.16:0,48,887	0/0:17,0:17:48.13:0,48,862	0/0:22,0:22:59.66:0,60,1114	0/0:41,0:41:99:0,117,2116	0/0:23,0:23:66.23:0,66,1229	0/0:25,0:25:75.26:0,75,1397	0/0:27,0:26:81.28:0,81,1507	0/0:21,0:20:63.18:0,63,1100	0/0:23,0:22:63.22:0,63,1172	0/0:32,0:32:93.25:0,93,1613	1/1:2,8:10:24.08:353,24,0
chr10	94965057	.	TG	T	2860	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-0.358;DP=570;FS=1.310;HRun=7;HaplotypeScore=72.3414;InbreedingCoeff=0.9994;MQ=67.39;MQ0=0;MQRankSum=-1.805;QD=23.83;ReadPosRankSum=2.815;VQSLOD=4.0186;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:62.99:0,63,767	0/0:12,0:12:33.11:0,33,415	0/0:19,0:18:47.63:0,48,522	0/0:12,0:12:33.08:0,33,391	0/0:20,0:20:57.17:0,57,701	0/0:26,0:26:78.24:0,78,963	0/0:22,0:22:57.17:0,57,700	0/0:20,0:20:52.37:0,52,606	0/0:20,0:20:60.19:0,60,755	0/0:17,0:17:36.12:0,36,453	0/0:16,0:16:42.12:0,42,515	0/0:25,0:25:75.22:0,75,919	0/0:19,0:19:57.18:0,57,711	0/0:14,0:14:39.10:0,39,460	0/0:15,0:14:42.13:0,42,528	0/0:19,0:19:54.17:0,54,679	0/0:32,0:32:93.30:0,93,1166	0/0:29,0:29:75.23:0,75,931	1/1:3,14:17:39.08:398,39,0	1/1:3,13:16:36.08:367,36,0	1/1:3,30:33:81.18:825,81,0	0/0:14,0:14:33.11:0,33,414	0/0:23,0:23:54.17:0,54,678	0/0:25,0:25:72.23:0,72,889	0/0:18,0:18:48.15:0,48,603	1/1:2,23:25:34.38:651,34,0	1/1:4,25:29:78.18:795,78,0	0/0:9,0:9:27.09:0,27,340
chr10	94965363	.	C	CT	552.61	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=-1.285;DP=592;FS=10.193;HRun=10;HaplotypeScore=64.7280;InbreedingCoeff=0.4444;MQ=65.06;MQ0=25;MQRankSum=0.192;QD=4.93;ReadPosRankSum=2.336;VQSLOD=0.4812;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,30:38:7.70:630,8,0	0/0:4,0:4:8.99:0,9,74	0/1:40,0:10:16.30:16,0,29	0/1:33,0:13:1.50:2,0,41	0/0:25,0:25:59.85:0,60,484	0/0:18,0:18:39.80:0,40,341	0/0:15,0:14:29.94:0,30,246	0/0:29,0:31:66.97:0,67,527	0/0:11,0:12:29:0,29,228	0/0:10,0:10:23.32:0,23,179	0/0:21,0:21:59.52:0,60,477	0/0:18,0:17:35.90:0,36,289	0/0:17,0:17:17.46:0,17,218	0/0:22,0:24:57.85:0,58,444	0/0:14,0:13:32.96:0,33,271	0/0:17,0:17:26.61:0,27,221	0/0:37,1:38:56.83:0,57,651	0/0:20,0:20:41.91:0,42,343	0/0:13,0:13:29.91:0,30,242	0/0:19,0:19:43.97:0,44,350	0/0:17,0:17:41.52:0,42,327	0/0:23,0:23:47.84:0,48,379	0/0:19,0:20:30.28:0,30,258	0/0:25,0:25:50.72:0,51,406	0/0:17,0:16:47.89:0,48,383	0/0:27,0:25:44.89:0,45,368	0/0:25,1:26:23.94:0,24,389	0/0:9,0:8:23.97:0,24,197
chr10	94965774	.	CTA	C	1258.55	PASS	AB=0.981;AC=5;AF=0.100;AN=50;BaseQRankSum=7.211;DP=297;FS=4.259;HRun=0;HaplotypeScore=43.2168;InbreedingCoeff=0.4789;MQ=92.50;MQ0=3;MQRankSum=0.522;QD=11.99;ReadPosRankSum=-1.078;VQSLOD=2.2023;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:21.07:0,21,347	0/0:2,0:2:6.02:0,6,99	0/0:24,0:15:2.96:0,3,21	0/1:50,0:24:22.41:22,0,101	0/0:7,0:7:18.06:0,18,297	0/0:15,0:15:39.13:0,39,640	./.	1/1:13,26:39:81.19:971,81,0	0/0:4,0:4:9.03:0,9,149	0/0:7,0:7:15.05:0,15,248	0/0:1,0:1:3.01:0,3,34	0/0:4,0:4:9.03:0,9,149	0/0:9,0:9:24.08:0,24,391	0/0:3,0:3:9.03:0,9,148	0/0:6,0:6:15.05:0,15,245	0/0:5,0:5:6.02:0,6,99	0/0:22,0:23:54.13:0,54,829	0/0:16,1:17:4.61:0,5,607	0/0:11,0:11:21.07:0,21,347	0/0:7,0:7:15.05:0,15,244	0/0:2,0:2:6.02:0,6,99	./.	0/0:2,0:2:6.02:0,6,99	./.	0/0:9,0:9:15.05:0,15,245	0/0:12,0:12:21.06:0,21,322	0/0:8,0:8:21.07:0,21,347	1/1:0,14:15:32.94:389,33,0
chr10	94968037	.	T	TCA	1916.22	PASS	AB=0.711;AC=18;AF=0.346;AN=52;BaseQRankSum=-1.263;DP=418;FS=1.250;HRun=0;HaplotypeScore=74.7970;InbreedingCoeff=0.6280;MQ=61.94;MQ0=8;MQRankSum=-2.677;QD=12.36;ReadPosRankSum=-0.876;VQSLOD=3.1658;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:21:26.91:0,27,284	0/1:3,3:8:25.04:83,0,25	0/0:29,0:10:2.90:0,3,16	./.	1/1:9,13:26:32.72:505,33,0	0/0:8,0:8:15.04:0,15,171	0/0:18,0:18:29.57:0,30,315	0/0:15,0:27:13.76:0,14,61	./.	0/0:9,0:10:8.85:0,9,73	0/0:11,0:13:22.96:0,23,227	0/1:7,0:7:3.88:4,0,174	0/0:6,0:6:15.03:0,15,160	0/0:6,0:6:12.02:0,12,127	0/1:4,10:15:0.94:426,0,1	1/1:3,6:10:15.05:230,15,0	0/0:20,0:23:31.07:0,31,278	0/0:27,0:27:49.35:0,49,524	1/1:10,0:10:12:106,12,0	1/1:12,0:14:8.11:54,8,0	1/1:14,0:14:8.86:59,9,0	0/0:9,0:9:24.07:0,24,271	0/0:14,0:14:26.99:0,27,306	0/0:14,0:14:5.99:0,6,189	0/1:7,7:15:29.74:252,0,30	1/1:12,0:22:29.18:257,29,0	1/1:6,0:12:16.17:124,16,0	0/0:2,0:16:28.58:0,29,160
chr10	94969426	.	G	GA	4557.12	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-14.734;DP=757;FS=5.854;HRun=9;HaplotypeScore=71.4330;InbreedingCoeff=0.9811;MQ=82.95;MQ0=0;MQRankSum=0.227;QD=26.04;ReadPosRankSum=2.003;VQSLOD=5.5004;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:68.97:0,69,599	1/1:1,10:11:7.03:306,7,0	0/0:26,0:25:37.17:0,37,390	0/0:20,0:20:50.37:0,50,409	1/1:2,27:29:61.14:888,61,0	0/0:38,0:38:99:0,108,938	0/0:25,0:25:50.96:0,51,439	0/0:41,1:42:76.77:0,77,834	1/1:5,26:31:63.17:697,63,0	0/0:31,0:31:86.95:0,87,750	0/0:25,2:27:38.78:0,39,563	0/0:38,0:38:98.93:0,99,851	0/0:32,0:32:80.97:0,81,700	0/0:30,0:30:77.94:0,78,670	1/1:5,28:33:81.22:896,81,0	1/1:5,34:39:99:1067,99,0	0/0:12,0:12:35.95:0,36,304	0/0:13,0:13:29.87:0,30,260	0/0:21,1:22:20.80:0,21,410	0/0:21,0:22:58.99:0,59,496	0/0:15,0:15:32.98:0,33,287	0/0:23,0:23:56.95:0,57,488	0/0:32,0:32:86.97:0,87,753	0/0:35,0:35:99:0,102,881	1/1:8,24:32:43.13:704,43,0	0/0:30,0:30:80.98:0,81,703	0/0:31,0:31:60.43:0,60,679	0/0:11,0:11:32.95:0,33,279
chr10	94971780	.	T	TAGGC	1175.57	PASS	AB=0.929;AC=28;AF=0.737;AN=38;BaseQRankSum=2.579;DP=402;FS=27.829;HRun=0;HaplotypeScore=78.5900;InbreedingCoeff=0.4031;MQ=81.26;MQ0=3;MQRankSum=-1.909;QD=5.02;ReadPosRankSum=-2.518;VQSLOD=-0.1406;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:5.61:0,6,88	./.	./.	./.	./.	0/0:8,0:7:0:0,0,0	1/1:26,0:25:16.30:173,16,0	./.	0/1:15,2:18:36.58:130,0,37	1/1:13,0:13:3:29,3,0	./.	1/1:28,0:28:9.90:103,10,0	1/1:12,0:12:12.03:198,12,0	1/1:16,0:21:3.01:52,3,0	1/1:12,4:16:3.01:70,3,0	1/1:6,4:10:2.82:69,3,0	0/0:26,0:27:48.11:0,48,644	0/0:26,0:26:24.05:0,24,334	./.	./.	1/1:29,0:29:8.69:81,9,0	1/1:6,0:6:3.01:44,3,0	0/1:2,0:2:0:0,0,0	1/1:27,0:27:9.01:125,9,0	1/1:8,2:10:3.01:70,3,0	1/1:5,0:5:3.01:51,3,0	1/1:6,0:10:6.02:104,6,0	./.
chr10	94972038	.	GTTTTATCTC	G	2072.55	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.270;DP=646;FS=9.781;HRun=0;HaplotypeScore=171.9869;InbreedingCoeff=0.9820;MQ=91.37;MQ0=0;MQRankSum=-3.309;QD=76.76;ReadPosRankSum=-2.411;VQSLOD=2.8259;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,4729	0/0:9,0:9:27.08:0,27,1239	0/0:28,0:28:81.28:0,81,3630	0/0:24,0:24:72.25:0,72,3039	0/0:21,0:21:63.22:0,63,3067	0/0:25,0:25:72.25:0,72,3566	0/0:22,0:22:66.21:0,66,3089	1/1:0,23:23:69.18:1798,69,0	0/0:22,0:22:66.23:0,66,3142	0/0:14,0:14:42.11:0,42,1804	0/0:10,0:10:30.10:0,30,1237	0/0:35,0:35:99:0,105,5007	0/0:32,0:32:96.33:0,96,4686	0/0:35,0:35:99:0,105,5043	0/0:34,0:34:99:0,102,4965	0/0:27,0:27:81.26:0,81,3883	0/0:38,0:37:99:0,114,5524	0/0:26,0:26:78.27:0,78,3839	0/0:25,0:25:75.26:0,75,3304	0/0:20,0:20:60.21:0,60,2745	0/0:21,0:21:63.22:0,63,3023	0/0:8,0:8:24.08:0,24,1167	0/0:11,0:11:33.11:0,33,1477	0/0:23,0:23:69.24:0,69,3454	0/0:18,0:18:51.18:0,51,2372	0/0:23,0:23:69.24:0,69,3221	0/0:35,0:35:99:0,105,5154	1/1:0,4:4:12.04:391,12,0
chr10	94974386	.	GAT	G	6261.98	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=12.820;DP=365;FS=23.567;HRun=0;HaplotypeScore=132.4838;InbreedingCoeff=0.8608;MQ=87.98;MQ0=0;MQRankSum=-12.850;QD=22.77;ReadPosRankSum=3.158;VQSLOD=3.6671;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,6:7:20.92:166,21,0	1/1:0,7:7:20.99:182,21,0	0/0:19,0:19:55.61:0,56,922	0/0:17,0:17:39.15:0,39,893	1/1:0,1:1:2.98:22,3,0	1/1:1,7:9:23.95:195,24,0	1/1:3,14:17:49.69:384,50,0	1/1:0,15:15:43.58:416,44,0	1/1:1,16:18:50.01:420,50,0	1/1:1,8:9:21.15:220,21,0	1/1:1,2:3:8.97:71,9,0	1/1:0,21:21:61.79:492,62,0	1/1:0,18:18:50.60:370,51,0	1/1:2,13:16:47.67:395,48,0	1/1:0,20:23:62.82:521,63,0	1/1:2,18:20:58.64:480,59,0	0/0:30,0:29:90.31:0,90,1814	0/0:24,0:24:72.23:0,72,1423	1/1:1,6:7:20.97:197,21,0	1/1:4,3:7:15.20:104,15,0	1/1:2,9:11:26.68:232,27,0	1/1:0,2:3:8.57:56,9,0	1/1:2,1:3:2.99:24,3,0	1/1:2,10:12:25.42:226,25,0	1/1:0,6:6:17.92:140,18,0	1/1:1,8:9:25.39:212,25,0	1/1:3,26:29:82.90:652,83,0	1/1:2,2:4:11.31:85,11,0
chr10	94974390	.	A	AAAGAG	22601.61	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=10.237;DP=457;FS=20.753;HRun=0;HaplotypeScore=151.0261;InbreedingCoeff=0.9582;MQ=76.21;MQ0=0;MQRankSum=-13.473;QD=60.76;ReadPosRankSum=0.857;VQSLOD=4.1076;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,6:17:27.09:732,27,0	1/1:3,7:10:27.07:658,27,0	0/0:16,0:16:45.59:0,46,824	0/0:15,0:15:42.13:0,42,893	1/1:11,1:12:12.04:283,12,0	1/1:4,7:11:27.08:650,27,0	1/1:1,14:17:51.17:1234,51,0	1/1:12,11:23:51.11:1144,51,0	1/1:3,16:20:60.21:1541,60,0	1/1:11,6:17:33.06:704,33,0	1/1:6,2:8:9.03:218,9,0	1/1:9,21:30:90.29:2214,90,0	1/1:2,18:20:60.21:1479,60,0	1/1:3,13:16:45.15:1110,45,0	1/1:5,20:25:75.25:1825,75,0	1/1:4,18:23:66.23:1720,66,0	0/0:31,0:30:90.27:0,90,1981	0/0:23,0:23:69.22:0,69,1554	1/1:3,6:9:27.09:740,27,0	1/1:5,3:9:14.71:317,15,0	1/1:3,9:12:25.33:563,25,0	1/1:5,2:8:15.05:357,15,0	1/1:6,1:7:15.05:367,15,0	1/1:4,10:14:29.60:658,30,0	1/1:6,6:12:27.07:580,27,0	1/1:3,8:12:27.09:714,27,0	1/1:6,26:34:99:2475,99,0	1/1:4,2:6:17.97:318,18,0
chr10	94974391	.	G	GC	2850.67	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=13.193;DP=459;FS=13.496;HRun=1;HaplotypeScore=195.3239;InbreedingCoeff=0.7725;MQ=75.27;MQ0=0;MQRankSum=-13.120;QD=7.56;ReadPosRankSum=1.493;VQSLOD=-0.5835;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:0.42:53,0,0	1/1:11,0:11:18.73:64,19,0	0/0:15,0:15:36.67:0,37,390	0/0:15,0:15:42.13:0,42,537	1/1:13,0:13:10.41:50,10,0	1/1:9,3:12:20.22:97,20,0	1/1:17,0:17:34.75:129,35,0	1/1:23,0:23:30.87:119,31,0	1/1:20,0:20:48.94:221,49,0	1/1:19,0:19:28.05:167,28,0	1/1:8,0:8:7.13:28,7,0	1/1:30,0:30:63.89:296,64,0	1/1:20,0:20:45.45:206,45,0	1/1:16,0:16:37.51:177,38,0	1/1:25,0:25:55.09:221,55,0	1/1:23,0:23:34.10:213,34,0	0/0:29,0:29:84.25:0,84,1074	0/0:23,0:23:69.22:0,69,892	1/1:9,0:9:22:93,22,0	1/1:8,0:8:13.95:79,14,0	1/1:12,0:12:21.21:110,21,0	1/1:8,0:8:9.63:42,10,0	1/1:5,2:8:13.19:78,13,0	1/1:14,0:14:22.47:90,22,0	1/1:12,0:12:21.61:92,22,0	0/1:12,0:12:4.73:47,0,5	1/1:34,0:34:63.66:300,64,0	1/1:5,0:5:9.89:45,10,0
chr10	94976225	.	A	ACACAC	2544.29	PASS	AB=0.981;AC=27;AF=0.482;AN=56;BaseQRankSum=8.649;DP=574;FS=43.037;HRun=0;HaplotypeScore=320.6039;InbreedingCoeff=-0.7403;MQ=41.32;MQ0=15;MQRankSum=-4.844;QD=4.88;ReadPosRankSum=-0.018;VQSLOD=1.4337;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:20.62:0,21,353	0/1:16,2:17:99:222,0,227	0/1:29,0:6:23.02:23,0,51	0/0:35,0:8:3.35:0,3,140	0/1:23,0:23:5.46:5,0,340	0/1:23,0:22:61.97:62,0,492	0/1:24,0:24:64.17:64,0,455	0/1:23,0:19:99:298,0,438	0/1:14,0:12:43.80:44,0,232	0/1:31,2:30:99:433,0,272	0/1:12,3:14:99:147,0,116	0/1:25,0:23:62.76:63,0,285	0/1:22,0:21:30.52:31,0,261	0/1:24,0:24:40.50:41,0,582	0/1:14,0:14:40.97:41,0,185	0/1:13,0:13:76.04:76,0,118	0/1:16,0:15:42.85:43,0,261	0/1:17,0:17:2.28:2,0,510	1/1:10,0:8:10.09:214,10,0	0/1:17,0:17:3.71:4,0,18	0/1:25,0:25:76.19:76,0,133	0/1:22,0:22:4.71:5,0,502	0/1:17,1:18:42.94:43,0,132	0/1:17,0:17:25.05:25,0,215	0/1:30,1:30:99:135,0,211	0/1:26,1:26:99:323,0,343	0/1:14,0:14:83.51:198,0,84	0/1:6,0:6:53.79:77,0,54
chr10	94976258	.	AAC	A	3574.96	PASS	AB=0.921;AC=21;AF=0.375;AN=56;BaseQRankSum=0.563;DP=858;FS=3.851;HRun=0;HaplotypeScore=370.0828;InbreedingCoeff=0.2993;MQ=50.32;MQ0=26;MQRankSum=-0.251;QD=7.22;ReadPosRankSum=2.196;VQSLOD=2.3869;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:39.59:0,40,513	0/1:16,1:16:18.06:18,0,317	0/0:81,1:13:0.08:0,0,92	0/1:86,3:25:28.43:28,0,96	0/0:32,0:32:11.18:0,11,286	1/1:13,15:28:54.72:628,55,0	1/1:18,15:34:40.93:519,41,0	0/0:21,0:16:21.47:0,21,275	0/0:15,0:13:12.52:0,13,289	0/1:48,1:46:8.04:8,0,585	0/0:24,0:23:27.65:0,28,482	0/1:23,10:31:31.52:213,0,32	0/1:18,8:25:6.70:331,0,7	1/1:19,11:30:50.84:549,51,0	0/1:13,1:15:18.16:18,0,207	0/0:18,0:18:4.88:0,5,158	0/0:18,0:17:32.72:0,33,469	0/1:23,2:25:35.88:36,0,713	0/0:16,0:14:21.80:0,22,254	0/1:24,0:24:7.07:7,0,227	0/0:51,1:50:64.07:0,64,1383	1/1:24,13:37:21.53:438,22,0	1/1:10,7:17:16.89:237,17,0	1/1:8,15:23:44.98:540,45,0	0/1:48,0:47:3.56:4,0,513	0/0:37,0:36:49.22:0,49,981	0/0:17,0:17:18.74:0,19,386	0/0:6,1:7:6.28:0,6,147
chr10	94976260	.	CA	C	3834.48	PASS	AB=0.898;AC=25;AF=0.446;AN=56;BaseQRankSum=16.246;DP=877;FS=163.493;HRun=3;HaplotypeScore=363.4635;InbreedingCoeff=-0.6740;MQ=48.81;MQ0=27;MQRankSum=-11.426;QD=6.15;ReadPosRankSum=0.704;VQSLOD=-0.5299;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,2:25:60.39:60,0,546	0/1:15,1:15:99:132,0,299	0/0:83,0:13:7.51:0,8,184	0/0:89,0:24:27.88:0,28,271	0/1:27,6:33:87.91:88,0,263	0/1:27,1:28:25.74:65,0,26	0/1:28,6:34:30.28:93,0,30	0/1:21,1:17:4.05:4,0,491	0/1:14,1:13:51.97:52,0,306	0/1:40,11:48:99:734,0,534	0/1:22,3:24:90.63:91,0,455	0/1:28,5:31:69.29:235,0,69	0/1:20,6:25:74.51:258,0,75	1/1:26,4:30:1.69:263,2,0	0/1:15,0:15:65.41:65,0,219	0/1:17,1:18:99:111,0,191	0/1:18,1:18:64.42:64,0,458	0/1:25,1:26:16.52:17,0,816	0/1:17,2:17:99:106,0,307	0/1:17,7:24:99:236,0,200	0/0:53,1:52:17.06:0,17,1460	0/1:32,6:38:25.31:129,0,25	0/1:17,1:18:6.36:102,0,6	0/0:24,0:24:14.90:0,15,42	0/1:42,6:47:99:310,0,522	0/1:29,8:36:99:353,0,1015	0/1:15,2:17:99:166,0,384	0/1:6,1:7:98:98,0,161
chr10	94976300	.	T	TAC	2956.90	PASS	AB=0.895;AC=13;AF=0.232;AN=56;BaseQRankSum=2.997;DP=865;FS=24.247;HRun=0;HaplotypeScore=297.2188;InbreedingCoeff=0.5960;MQ=55.55;MQ0=18;MQRankSum=-5.036;QD=14.78;ReadPosRankSum=-0.109;VQSLOD=2.0309;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:77.03:0,77,1044	1/1:7,6:13:26.07:332,26,0	0/0:57,0:19:23.55:0,24,251	0/0:60,0:21:8.64:0,9,133	1/1:21,8:29:1.06:493,1,0	0/0:24,0:24:36.43:0,36,509	0/0:36,0:37:65.94:0,66,727	0/0:22,0:22:15.42:0,15,405	0/1:11,6:15:32.36:323,0,32	0/0:47,0:47:33.70:0,34,818	0/0:23,0:23:26.48:0,26,295	0/0:29,0:29:43.89:0,44,498	0/0:23,0:24:57.18:0,57,703	0/0:30,0:30:20.97:0,21,521	1/1:5,14:20:38.82:592,39,0	1/1:6,17:22:2.52:546,3,0	0/0:23,0:24:48.93:0,49,650	0/0:26,0:29:47.60:0,48,701	0/0:21,0:19:6.41:0,6,258	0/1:35,0:35:1.02:1,0,531	0/0:61,0:61:99:0,142,1665	0/0:40,0:40:7.85:0,8,558	0/1:17,1:18:36.24:36,0,231	0/0:31,0:31:72.08:0,72,859	1/1:31,14:45:20.34:797,20,0	0/0:32,0:32:24.49:0,24,644	0/0:23,0:23:42.67:0,43,538	0/0:9,0:9:23.74:0,24,266
chr10	94976302	.	C	CAA	1361.46	PASS	AB=0.992;AC=9;AF=0.161;AN=56;BaseQRankSum=6.627;DP=886;FS=1.988;HRun=1;HaplotypeScore=307.5269;InbreedingCoeff=0.1658;MQ=55.19;MQ0=19;MQRankSum=-3.391;QD=6.00;ReadPosRankSum=1.530;VQSLOD=-0.5504;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:93.97:0,94,1366	0/1:13,0:13:10.35:139,0,10	0/0:60,0:21:21.04:0,21,370	0/1:61,0:22:2.32:2,0,232	0/1:28,0:28:4.39:232,0,4	0/0:24,1:25:51.30:0,51,734	0/0:36,0:36:80.19:0,80,1074	0/0:24,0:24:22.94:0,23,695	0/1:18,0:16:95.52:150,0,96	0/0:48,0:48:62.29:0,62,1305	0/0:23,1:24:19.71:0,20,380	0/0:29,1:30:52.65:0,53,720	0/0:26,0:26:68.77:0,69,937	0/0:30,0:30:47.86:0,48,738	1/1:20,0:20:37.07:327,37,0	0/1:23,0:22:35.27:280,0,35	0/0:26,0:26:67.92:0,68,914	0/0:29,0:29:81.52:0,82,1021	0/0:22,0:20:41.38:0,41,483	0/0:36,0:36:55.37:0,55,839	0/0:63,0:62:99:0,153,2196	0/0:40,0:40:51.65:0,52,805	0/1:17,1:18:40.53:41,0,289	0/0:32,0:32:75.20:0,75,1107	0/1:45,0:45:99:334,0,134	0/0:36,0:36:82.97:0,83,1064	0/0:23,0:23:50.29:0,50,728	0/0:9,0:9:23.82:0,24,333
chr10	94976303	.	A	ACAC	2570.60	PASS	AB=0.969;AC=16;AF=0.286;AN=56;BaseQRankSum=15.428;DP=891;FS=62.685;HRun=0;HaplotypeScore=313.0790;InbreedingCoeff=-0.1762;MQ=55.25;MQ0=19;MQRankSum=-8.170;QD=6.19;ReadPosRankSum=-3.577;VQSLOD=0.4478;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:17.30:0,17,1418	0/1:11,2:13:11.11:218,0,11	0/0:60,0:21:21.80:0,22,568	0/0:61,0:22:23.15:0,23,344	0/1:25,3:28:17.78:186,0,18	0/0:25,0:25:0.07:0,0,772	0/0:35,0:35:51.90:0,52,1139	0/0:26,0:26:52:0,52,862	0/1:18,0:16:75.86:76,0,109	0/1:47,0:48:99:419,0,1162	0/1:23,1:24:39.37:39,0,399	0/0:30,0:30:2.18:0,2,763	0/0:26,0:26:24.86:0,25,1004	0/1:30,0:30:45.31:45,0,763	1/1:19,0:19:13.88:101,14,0	0/1:23,0:22:9.08:135,0,9	0/0:27,0:27:69.22:0,69,1077	0/0:29,0:29:47.93:0,48,1149	0/1:23,0:21:9.84:10,0,499	0/1:35,1:36:99:343,0,832	0/0:64,0:63:99:0,157,2484	0/1:38,2:40:99:238,0,823	0/0:18,0:18:16.14:0,16,347	0/0:32,0:32:75.06:0,75,1236	0/1:44,2:46:2.46:666,0,2	0/1:35,1:36:99:156,0,1051	0/1:22,0:22:94.23:94,0,728	0/1:9,0:9:1.44:1,0,326
chr10	94976318	.	C	CCA	369.22	PASS	AB=0.957;AC=8;AF=0.143;AN=56;BaseQRankSum=10.209;DP=821;FS=1.725;HRun=0;HaplotypeScore=202.0568;InbreedingCoeff=0.0420;MQ=60.60;MQ0=15;MQRankSum=-6.835;QD=1.96;ReadPosRankSum=-2.074;VQSLOD=2.5091;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:97.81:0,98,1372	1/1:10,1:12:14.36:99,14,0	0/0:56,0:25:43.69:0,44,468	0/0:39,1:19:14.33:0,14,247	0/1:19,1:22:67.26:67,0,80	0/0:21,1:22:19.54:0,20,588	0/0:34,0:34:84.04:0,84,1007	0/0:24,0:23:59.88:0,60,751	0/0:18,0:16:0.04:0,0,176	0/1:41,1:42:60.29:60,0,1000	0/0:13,0:14:23.95:0,24,279	0/0:30,0:30:58.66:0,59,704	0/0:27,0:27:69:0,69,861	0/0:28,0:28:32.66:0,33,663	0/1:19,0:19:57.82:77,0,58	0/1:26,0:25:30.35:30,0,163	0/0:31,0:31:79.09:0,79,1014	0/0:29,0:29:72.79:0,73,945	0/0:22,0:21:2.35:0,2,458	0/0:29,1:30:0.98:0,1,640	0/0:69,0:69:99:0,169,2173	0/1:29,1:32:23.47:23,0,643	0/0:15,0:15:8.04:0,8,265	0/0:34,0:34:68.97:0,69,942	0/1:34,0:35:99:149,0,189	0/0:31,0:31:60.02:0,60,997	0/0:23,1:24:25.06:0,25,700	0/0:13,0:13:24.04:0,24,308
chr10	94977308	.	CGTGGTCGAG	C	8722.69	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.845;DP=632;FS=5.027;HRun=0;HaplotypeScore=178.5988;InbreedingCoeff=0.9982;MQ=82.38;MQ0=0;MQRankSum=-15.368;QD=58.15;ReadPosRankSum=3.533;VQSLOD=4.6052;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,5567	0/0:16,0:16:48.16:0,48,2235	0/0:21,0:21:59.82:0,60,2043	0/0:20,0:20:51.16:0,51,1973	0/0:19,0:19:57.18:0,57,2449	1/1:3,24:27:63.22:1887,63,0	1/1:3,12:15:24.08:721,24,0	0/0:40,0:40:99:0,105,4987	0/0:20,0:20:51.18:0,51,2350	0/0:15,0:15:36.12:0,36,1731	0/0:10,0:10:30.10:0,30,1328	1/1:5,16:21:30.10:898,30,0	1/1:4,17:21:45.15:1350,45,0	1/1:2,19:21:48.16:1437,48,0	0/0:20,0:20:60.12:0,60,2327	0/0:29,0:29:78.24:0,78,3483	0/0:32,0:32:90.24:0,90,3970	0/0:31,0:31:90.31:0,90,4136	0/0:18,0:18:54.17:0,54,2106	0/0:19,0:19:51.18:0,51,2372	0/0:65,0:65:99:0,196,8990	1/1:2,13:15:30.10:900,30,0	1/1:1,10:11:21.07:630,21,0	1/1:3,16:19:30.10:900,30,0	0/0:12,0:12:24.08:0,24,1124	0/0:20,0:20:51.18:0,51,2325	0/0:21,0:21:60.21:0,60,2876	0/0:11,0:11:33.11:0,33,1583
chr10	94977764	.	GA	G	2946.57	PASS	AB=0.671;AC=23;AF=0.411;AN=56;BaseQRankSum=6.493;DP=590;FS=17.476;HRun=13;HaplotypeScore=73.6597;InbreedingCoeff=0.6096;MQ=76.40;MQ0=3;MQRankSum=0.928;QD=10.99;ReadPosRankSum=0.515;VQSLOD=1.4268;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:29:36.68:0,37,443	0/0:11,0:11:24.04:0,24,233	0/0:43,1:29:2.68:0,3,140	0/0:19,0:13:27.80:0,28,215	0/0:33,1:34:15.73:0,16,593	0/1:5,10:15:21.48:145,0,21	1/1:3,16:20:44.68:314,45,0	0/0:32,2:37:28.84:0,29,561	0/0:12,0:14:35.89:0,36,335	0/0:21,1:22:14.15:0,14,299	0/0:15,0:15:32.99:0,33,293	1/1:4,12:16:6.61:211,7,0	1/1:11,15:26:38.70:284,39,0	1/1:7,15:22:35.68:262,36,0	0/0:32,0:32:56.11:0,56,681	0/0:13,0:14:29.88:0,30,273	0/0:17,2:19:20.15:0,20,351	0/0:13,0:13:36.06:0,36,350	1/1:4,21:26:61.63:438,62,0	1/1:3,17:20:49.72:356,50,0	0/1:3,4:7:20.07:52,0,20	0/1:10,11:21:18.38:178,0,18	0/1:3,16:19:4.15:240,0,4	1/1:1,8:9:20.87:153,21,0	0/1:17,2:19:5.85:6,0,277	1/1:12,12:24:6.48:211,6,0	1/1:7,16:23:18.54:299,19,0	0/0:16,0:18:50.75:0,51,466
chr10	94979663	.	GA	G	9036.32	PASS	AB=0.814;AC=44;AF=0.786;AN=56;BaseQRankSum=7.148;DP=671;FS=8.278;HRun=11;HaplotypeScore=76.8640;InbreedingCoeff=0.7475;MQ=73.76;MQ0=5;MQRankSum=0.344;QD=17.15;ReadPosRankSum=3.468;VQSLOD=5.6810;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,35:42:58.32:638,58,0	1/1:2,7:9:20.97:172,21,0	0/0:33,0:23:0.70:0,1,144	0/1:17,0:14:0.97:1,0,156	1/1:7,28:35:76.31:612,76,0	1/1:5,20:25:9.93:436,10,0	1/1:3,12:15:6.76:199,7,0	0/0:24,0:25:62.76:0,63,619	1/1:2,16:18:41.94:343,42,0	1/1:4,18:22:53.87:437,54,0	1/1:8,21:29:38.34:449,38,0	1/1:5,7:12:23.95:194,24,0	1/1:0,20:20:50.94:419,51,0	0/1:9,13:22:18.88:274,0,19	1/1:1,23:24:62.91:517,63,0	1/1:1,29:30:68.90:567,69,0	0/0:38,0:41:99:0,104,1034	0/0:26,0:27:75:0,75,770	1/1:5,19:25:37.86:439,38,0	1/1:2,25:27:70.82:541,71,0	1/1:0,3:3:8.99:74,9,0	1/1:4,28:32:77.86:640,78,0	1/1:2,33:35:66.26:542,66,0	1/1:2,24:26:68.92:566,69,0	1/1:1,11:12:15.26:143,15,0	1/1:7,15:22:47.90:393,48,0	1/1:4,21:25:18.14:442,18,0	0/0:18,0:18:29.74:0,30,495
chr10	94980879	.	TA	T	9696.85	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=13.885;DP=636;FS=6.166;HRun=5;HaplotypeScore=59.9766;InbreedingCoeff=0.9843;MQ=63.48;MQ0=1;MQRankSum=2.700;QD=30.11;ReadPosRankSum=3.399;VQSLOD=5.5485;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.24:0,93,1218	1/1:1,11:12:30.08:339,30,0	0/0:13,0:10:22.05:0,22,346	0/0:11,0:9:19.58:0,20,216	1/1:2,28:30:72.20:817,72,0	0/0:23,0:23:60.19:0,60,804	0/0:14,0:14:42.13:0,42,560	0/0:35,0:35:99:0,99,1354	1/1:0,24:24:69.20:783,69,0	1/1:3,33:36:99:1132,102,0	1/1:3,28:31:84.24:950,84,0	0/0:23,0:23:66.22:0,66,903	0/0:32,0:32:90.30:0,90,1230	0/0:25,0:25:72.24:0,72,985	1/1:3,25:28:72.20:817,72,0	1/1:0,22:22:60.17:681,60,0	0/0:22,0:22:66.18:0,66,867	0/0:23,0:23:60.18:0,60,800	1/1:0,16:16:45.10:497,45,0	1/1:1,24:25:72.16:802,72,0	1/1:1,19:20:51.15:579,51,0	0/0:22,0:22:63.21:0,63,851	0/0:23,0:23:66.22:0,66,893	0/0:15,0:15:39.12:0,39,518	1/1:1,25:26:63.18:715,63,0	1/1:0,26:26:78.20:872,78,0	1/1:3,23:26:63.18:715,63,0	0/0:2,0:2:6.02:0,6,82
chr10	94981557	.	TTTTATAA	T	1297.90	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=4.905;DP=181;FS=0.000;HRun=0;HaplotypeScore=57.8796;InbreedingCoeff=0.6118;MQ=85.33;MQ0=0;MQRankSum=-5.917;QD=68.31;ReadPosRankSum=0.276;VQSLOD=3.5424;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:30.09:0,30,1053	0/0:1,0:1:3.01:0,3,92	0/0:11,0:7:21.04:0,21,357	0/0:10,0:7:9.03:0,9,155	0/0:7,0:7:21.07:0,21,772	0/0:14,0:14:42.14:0,42,1627	0/0:3,0:3:9.03:0,9,218	1/1:3,12:15:45.15:1164,45,0	0/0:4,0:4:12.04:0,12,384	0/0:6,0:6:18.06:0,18,717	0/0:8,0:8:24.07:0,24,807	0/0:4,0:4:12.04:0,12,356	0/0:6,0:6:18.06:0,18,692	0/0:4,0:4:12.04:0,12,503	0/0:9,0:9:27.09:0,27,1031	0/0:4,0:4:12.04:0,12,496	0/0:15,0:15:45.15:0,45,1718	0/0:9,0:9:27.08:0,27,812	0/0:12,0:12:33.11:0,33,1274	0/0:5,0:5:15.04:0,15,299	0/0:1,0:1:3.01:0,3,126	./.	0/0:2,0:2:6.02:0,6,214	0/0:1,0:1:3.01:0,3,62	0/0:5,0:5:15.05:0,15,542	0/0:3,0:3:9.03:0,9,351	0/0:7,0:7:21.07:0,21,781	1/1:1,3:3:9.03:247,9,0
chr10	94981570	.	TA	T	616.44	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=7.767;DP=200;FS=7.565;HRun=1;HaplotypeScore=46.4393;InbreedingCoeff=0.6597;MQ=79.93;MQ0=0;MQRankSum=-7.504;QD=23.71;ReadPosRankSum=0.740;VQSLOD=3.0256;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:24.08:0,24,384	0/0:2,0:2:6.02:0,6,96	0/0:8,0:5:10.97:0,11,73	0/0:9,0:6:0.95:0,1,49	0/0:9,0:9:27.09:0,27,424	0/0:12,0:12:36.12:0,36,575	0/0:5,0:5:12.04:0,12,192	1/1:10,12:22:64.60:622,65,0	0/0:8,0:8:24.06:0,24,352	0/0:10,0:10:30.09:0,30,430	0/0:6,0:6:18.06:0,18,288	0/0:6,0:6:18.06:0,18,281	0/0:10,0:10:30.10:0,30,458	0/0:5,0:5:15.04:0,15,217	0/0:8,0:8:24.07:0,24,361	0/0:6,0:6:18.06:0,18,286	0/0:16,0:16:48.15:0,48,737	0/0:8,0:8:21.04:0,21,308	0/0:8,0:8:24.08:0,24,376	0/0:2,0:2:6.02:0,6,96	0/0:5,0:5:15.03:0,15,209	0/0:2,0:2:6.02:0,6,96	0/0:3,0:3:9.03:0,9,136	./.	0/0:3,0:3:9.03:0,9,144	0/0:6,0:6:18.06:0,18,281	0/0:8,0:8:24.08:0,24,376	1/1:1,3:4:9.03:108,9,0
chr10	94981571	.	A	AT	610.84	PASS	AB=1.000;AC=5;AF=0.093;AN=54;BaseQRankSum=8.000;DP=206;FS=7.509;HRun=1;HaplotypeScore=47.8383;InbreedingCoeff=0.5546;MQ=81.51;MQ0=0;MQRankSum=-6.321;QD=17.45;ReadPosRankSum=0.336;VQSLOD=3.3087;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:24.08:0,24,336	0/0:2,0:2:6.02:0,6,84	0/1:8,0:6:8.29:8,0,18	0/0:9,0:6:1.14:0,1,63	0/0:10,0:10:27.09:0,27,373	0/0:12,0:12:36.12:0,36,503	0/0:5,0:5:12.04:0,12,168	1/1:13,9:22:61.48:641,61,0	0/0:8,0:8:24.06:0,24,316	0/0:10,0:10:30.09:0,30,392	0/0:6,0:6:18.06:0,18,252	0/0:7,0:7:18.06:0,18,251	0/0:10,0:10:30.10:0,30,416	0/0:4,0:4:12.04:0,12,168	0/0:8,0:8:24.07:0,24,318	0/0:6,0:6:18.05:0,18,234	0/0:17,0:17:45.15:0,45,628	0/0:8,0:8:21.04:0,21,272	0/0:9,0:9:24.08:0,24,334	0/0:2,0:2:6.02:0,6,84	0/0:6,0:6:15.03:0,15,191	0/0:2,0:2:6.02:0,6,83	0/0:4,0:4:9.03:0,9,123	./.	0/0:3,0:3:9.03:0,9,126	0/0:7,0:7:18.06:0,18,251	0/0:8,0:8:24.08:0,24,334	1/1:3,2:5:9:80,9,0
chr10	94983253	.	G	GT	2206.95	PASS	AB=0.861;AC=18;AF=0.321;AN=56;BaseQRankSum=-9.140;DP=519;FS=3.347;HRun=11;HaplotypeScore=62.1244;InbreedingCoeff=0.7541;MQ=72.01;MQ0=0;MQRankSum=0.347;QD=13.29;ReadPosRankSum=0.055;VQSLOD=3.7041;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:18,1:20:2.79:3,0,256	0/0:10,0:11:22.92:0,23,168	0/0:17,0:14:19.78:0,20,126	0/1:11,0:9:1.13:1,0,39	0/0:38,2:40:61.13:0,61,636	1/1:5,17:22:18.84:367,19,0	0/1:2,4:7:8.23:98,0,8	0/0:24,0:24:53.73:0,54,413	0/1:7,1:10:5.44:5,0,126	0/0:15,0:15:38.85:0,39,302	0/0:24,0:25:19.77:0,20,322	1/1:3,9:13:26.82:245,27,0	1/1:3,15:19:24.69:417,25,0	1/1:2,15:17:39.08:396,39,0	0/0:18,0:18:44.77:0,45,346	0/0:21,1:22:29.31:0,29,411	0/0:20,0:20:45.52:0,46,365	0/0:12,0:12:29.81:0,30,225	0/0:22,0:23:49.77:0,50,371	0/0:34,0:36:99:0,100,748	0/0:10,0:10:29.89:0,30,232	1/1:4,11:15:24.44:223,24,0	1/1:2,12:16:29.05:313,29,0	1/1:2,14:16:33.07:335,33,0	0/0:18,0:20:48.83:0,49,353	0/0:26,0:26:62.73:0,63,486	0/0:19,0:22:55.59:0,56,411	0/0:10,0:10:23.58:0,24,162
chr10	94983502	.	T	TA	569.64	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.524;DP=717;FS=1.385;HRun=11;HaplotypeScore=83.2871;InbreedingCoeff=0.9072;MQ=67.72;MQ0=4;MQRankSum=-0.314;QD=13.25;ReadPosRankSum=-2.201;VQSLOD=3.3622;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:62.82:0,63,459	0/0:6,0:6:14.94:0,15,116	0/0:32,0:26:41.73:0,42,308	0/0:28,0:18:15.34:0,15,115	0/0:34,2:39:46.81:0,47,696	0/0:13,0:13:38.85:0,39,302	0/0:28,0:28:15.73:0,16,411	1/1:13,24:34:26.13:592,26,0	0/0:23,0:23:56.77:0,57,441	0/0:33,0:33:69.15:0,69,534	0/0:17,1:20:15.41:0,15,283	0/0:24,0:24:44.87:0,45,439	0/0:28,0:28:68.65:0,69,526	0/0:14,0:14:32.85:0,33,255	0/0:39,0:39:99:0,107,816	0/0:29,0:32:77.82:0,78,575	0/0:30,0:30:71.59:0,72,552	0/0:17,0:17:44.79:0,45,344	0/0:30,0:30:41.23:0,41,498	0/0:29,0:30:61.72:0,62,470	0/0:14,1:15:8.41:0,8,248	0/0:17,0:17:32.81:0,33,255	0/0:21,0:22:53.78:0,54,418	0/0:35,0:35:95.50:0,95,729	0/0:22,0:22:59.73:0,60,464	0/0:28,0:28:59.67:0,60,463	0/0:34,1:37:41.83:0,42,670	1/1:2,4:6:9.02:91,9,0
chr10	94984773	.	A	AT	1054.93	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.484;DP=583;FS=7.734;HRun=9;HaplotypeScore=54.8424;InbreedingCoeff=0.9923;MQ=69.08;MQ0=0;MQRankSum=-0.082;QD=20.29;ReadPosRankSum=-1.536;VQSLOD=3.3428;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:62.96:0,63,547	0/0:11,0:11:26.99:0,27,234	0/0:11,0:10:23.90:0,24,201	0/0:9,0:10:23:0,23,184	0/0:29,0:29:65.91:0,66,564	0/0:18,0:18:44.99:0,45,391	0/0:21,0:20:47.95:0,48,413	1/1:14,22:36:66.15:712,66,0	0/0:17,0:17:47.98:0,48,417	0/0:20,0:20:47.95:0,48,410	0/0:19,0:20:56.03:0,56,475	0/0:16,0:16:35.98:0,36,313	0/0:19,0:19:44.98:0,45,391	0/0:15,0:15:35.97:0,36,309	0/0:25,0:25:33.09:0,33,508	0/0:32,0:32:83.96:0,84,726	0/0:24,0:24:65.98:0,66,573	0/0:16,0:16:35.99:0,36,313	0/0:23,0:23:44.97:0,45,388	0/0:26,0:26:65.02:0,65,552	0/0:22,0:22:59.98:0,60,521	0/0:9,0:9:17.99:0,18,156	0/0:28,0:28:65.96:0,66,569	0/0:13,0:13:32.99:0,33,287	0/0:22,0:22:62.96:0,63,541	0/0:23,0:24:62.02:0,62,524	0/0:31,0:33:85.03:0,85,710	1/1:1,15:16:42.11:465,42,0
chr10	94986668	.	T	TA	490.23	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-4.763;DP=472;FS=0.000;HRun=9;HaplotypeScore=46.2477;InbreedingCoeff=0.7873;MQ=75.26;MQ0=0;MQRankSum=1.778;QD=14.01;ReadPosRankSum=-5.724;VQSLOD=1.6322;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:47.99:0,48,417	0/0:4,0:6:14.03:0,14,110	0/1:9,0:9:2.20:2,0,130	0/0:13,0:13:32.51:0,33,269	0/0:22,0:22:56.97:0,57,494	0/0:22,0:22:39.42:0,39,497	0/0:11,0:11:32.99:0,33,287	1/1:6,17:23:51.12:554,51,0	0/0:20,0:20:50.98:0,51,442	0/0:21,0:20:59.99:0,60,521	0/0:23,0:24:59:0,59,497	0/0:19,0:19:56.99:0,57,495	0/0:17,0:17:38.97:0,39,338	0/0:15,0:15:38.99:0,39,338	0/0:20,0:20:50.98:0,51,442	0/0:19,0:19:53.99:0,54,469	0/0:30,1:31:89.97:0,90,781	0/0:19,0:19:47.86:0,48,417	0/0:14,0:14:41.99:0,42,364	0/0:23,0:23:59.94:0,60,512	0/0:14,0:14:32.99:0,33,286	0/0:11,0:11:29.99:0,30,260	0/0:16,0:16:38.98:0,39,339	0/0:10,0:10:20.98:0,21,182	0/0:13,0:13:32.98:0,33,286	0/0:15,0:15:35.98:0,36,312	0/0:25,0:25:65.97:0,66,573	1/1:3,0:3:5.98:47,6,0
chr10	94986808	.	G	GA	3504.28	PASS	AB=0.684;AC=53;AF=0.946;AN=56;BaseQRankSum=-5.116;DP=244;FS=10.267;HRun=3;HaplotypeScore=54.1331;InbreedingCoeff=-0.0633;MQ=80.59;MQ0=0;MQRankSum=-4.177;QD=14.36;ReadPosRankSum=1.584;VQSLOD=1.7836;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,5:9:23.14:157,23,0	1/1:0,4:4:11.56:85,12,0	0/1:7,6:13:62.90:219,0,63	0/1:7,3:10:87.79:94,0,88	1/1:0,7:7:13.18:58,13,0	1/1:1,7:8:19.92:104,20,0	1/1:1,3:4:11.37:61,11,0	1/1:0,8:8:23.55:164,24,0	1/1:0,11:11:23.55:117,24,0	1/1:0,6:6:14.72:116,15,0	1/1:4,6:9:8.33:38,8,0	1/1:5,8:13:32.81:201,33,0	1/1:3,8:11:27.04:148,27,0	1/1:0,6:6:16.74:80,17,0	1/1:2,10:12:34.01:191,34,0	1/1:0,7:7:20.12:104,20,0	1/1:4,4:8:17.59:133,18,0	1/1:2,6:6:14.88:150,15,0	0/1:3,6:9:2.82:131,0,3	1/1:0,9:9:25.57:130,26,0	1/1:4,3:7:20.57:185,21,0	1/1:2,5:7:15.69:68,16,0	1/1:0,11:11:30.39:160,30,0	1/1:1,6:7:8.20:36,8,0	1/1:2,13:15:38.22:237,38,0	1/1:2,7:9:22.69:125,23,0	1/1:0,9:9:21.67:127,22,0	1/1:2,4:6:11.87:86,12,0
chr10	94986813	.	CG	C	1634.59	PASS	AB=0.812;AC=54;AF=0.964;AN=56;BaseQRankSum=-3.828;DP=211;FS=14.734;HRun=4;HaplotypeScore=54.0722;InbreedingCoeff=-0.0512;MQ=74.87;MQ0=0;MQRankSum=-4.306;QD=7.75;ReadPosRankSum=1.663;VQSLOD=-0.3006;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,4:8:17.67:80,18,0	1/1:0,3:3:6.94:22,7,0	0/1:9,2:11:48.41:48,0,73	0/1:5,2:7:22.16:61,0,22	1/1:0,7:7:14.24:88,14,0	1/1:2,6:8:16.37:56,16,0	1/1:1,3:4:9.47:34,9,0	1/1:1,7:8:18.78:76,19,0	1/1:1,10:11:14.26:56,14,0	1/1:0,3:3:7.79:30,8,0	1/1:0,7:7:12.46:91,12,0	1/1:3,8:11:22.54:88,23,0	1/1:3,8:11:21.01:83,21,0	1/1:0,6:6:13.26:43,13,0	1/1:1,10:11:24.94:79,25,0	1/1:0,7:7:17.44:62,17,0	1/1:2,3:5:12.93:58,13,0	1/1:1,4:3:8.32:45,8,0	1/1:1,4:5:10.85:45,11,0	1/1:0,9:9:20.71:66,21,0	1/1:4,2:6:12.84:68,13,0	1/1:1,5:6:12.58:55,13,0	1/1:1,10:11:22.59:96,23,0	1/1:2,3:5:6.01:17,6,0	1/1:3,12:15:23.76:110,24,0	1/1:1,7:8:18.69:75,19,0	1/1:1,7:8:12.87:42,13,0	1/1:1,4:5:11.37:62,11,0
chr10	94986891	.	T	TC	97.96	PASS	AB=0.957;AC=12;AF=0.231;AN=52;BaseQRankSum=5.178;DP=209;FS=3.423;HRun=0;HaplotypeScore=38.6749;InbreedingCoeff=0.0848;MQ=28.86;MQ0=1;MQRankSum=0.403;QD=1.14;ReadPosRankSum=-2.959;VQSLOD=-0.0059;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:8:17.88:0,18,94	0/1:7,1:8:15.54:26,0,16	./.	./.	0/0:15,0:15:18.64:0,19,72	0/1:7,1:8:15.50:15,0,60	0/0:6,0:6:8.86:0,9,56	1/1:12,0:10:2.23:60,2,0	0/0:4,0:4:3.91:0,4,19	0/1:6,0:6:3.55:14,0,4	0/0:10,0:10:13.35:0,13,71	0/0:7,0:7:15.72:0,16,88	0/0:6,0:6:12.45:0,12,65	0/0:8,0:8:9.80:0,10,51	0/0:7,0:7:9.52:0,10,44	0/1:6,1:7:22.81:23,0,28	0/1:17,0:16:5.33:5,0,82	0/0:12,1:11:11.13:0,11,46	0/1:5,0:5:12.28:31,0,12	0/0:7,0:7:11.01:0,11,44	0/0:5,0:4:5.86:0,6,15	0/0:3,0:3:5.53:0,6,29	0/0:12,1:12:11.73:0,12,88	0/0:1,0:1:0:0,0,0	0/0:9,0:9:12.91:0,13,69	1/1:11,1:12:0.99:40,1,0	0/1:5,0:5:1.27:4,0,1	0/1:6,0:6:10.24:10,0,32
chr10	94987543	.	TAC	T	1135.97	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.051;DP=755;FS=14.177;HRun=0;HaplotypeScore=91.8506;InbreedingCoeff=0.9974;MQ=83.71;MQ0=0;MQRankSum=-6.486;QD=39.17;ReadPosRankSum=-0.589;VQSLOD=4.4428;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,111,2119	0/0:8,0:8:24.08:0,24,463	0/0:18,0:18:51.14:0,51,920	0/0:26,0:26:78.23:0,78,1413	0/0:31,0:31:93.32:0,93,1782	0/0:37,0:37:99:0,108,2073	0/0:29,0:29:87.27:0,87,1613	1/1:0,20:20:60.19:860,60,0	0/0:28,0:28:78.27:0,78,1497	0/0:35,0:35:99:0,102,1911	0/0:27,0:27:81.26:0,81,1513	0/0:34,0:34:99:0,102,1927	0/0:27,0:27:81.28:0,81,1564	0/0:27,0:27:78.27:0,78,1506	0/0:43,0:43:99:0,129,2367	0/0:29,0:29:87.30:0,87,1681	0/0:32,0:32:96.33:0,96,1810	0/0:9,0:9:24.08:0,24,463	0/0:20,0:20:60.21:0,60,1141	0/0:21,0:21:63.22:0,63,1205	0/0:41,0:41:99:0,120,2318	0/0:28,0:28:84.29:0,84,1622	0/0:22,0:22:66.23:0,66,1274	0/0:21,0:21:63.22:0,63,1196	0/0:23,0:23:69.24:0,69,1307	0/0:31,0:31:93.32:0,93,1792	0/0:38,0:38:99:0,114,2157	1/1:0,9:9:27.09:397,27,0
chr10	94988213	.	GGCCA	G	614.62	PASS	AB=0.873;AC=15;AF=0.268;AN=56;BaseQRankSum=6.177;DP=665;FS=9.887;HRun=0;HaplotypeScore=164.3473;InbreedingCoeff=-0.3300;MQ=61.07;MQ0=44;MQRankSum=-6.365;QD=1.89;ReadPosRankSum=-4.355;VQSLOD=-0.0985;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:89.82:0,90,2500	0/1:13,2:15:10.05:10,0,943	0/0:52,0:27:68.40:0,68,1560	0/0:59,0:18:31.12:0,31,964	0/1:18,2:19:26.77:27,0,733	0/0:20,1:17:48.15:0,48,1303	0/1:21,2:22:30.39:30,0,1238	0/0:29,0:26:75.26:0,75,2046	0/1:14,8:17:71.20:71,0,855	0/1:21,2:22:88.08:88,0,1398	0/0:15,0:14:36.12:0,36,945	0/1:19,4:21:24.33:24,0,1227	0/1:11,4:12:33.84:34,0,631	0/1:20,3:19:4.51:5,0,1232	0/0:19,8:24:50.37:0,50,1326	0/1:26,7:31:64.47:64,0,1521	0/0:26,0:24:75.23:0,75,2082	0/0:10,0:10:27.09:0,27,701	0/1:16,1:15:16.96:17,0,1029	0/0:13,1:14:29.42:0,29,796	0/0:11,1:9:24.08:0,24,675	0/0:13,3:16:27.09:0,27,771	0/1:21,3:19:13.49:13,0,1095	0/0:16,4:18:20.91:0,21,572	0/1:18,4:17:4.29:4,0,983	0/1:20,4:20:99:164,0,1073	0/1:23,6:25:99:211,0,1436	0/1:9,0:9:1.19:1,0,494
chr10	94988373	.	T	TTGTG	1979.32	PASS	AB=0.625;AC=21;AF=0.375;AN=56;BaseQRankSum=7.475;DP=794;FS=10.311;HRun=0;HaplotypeScore=139.5000;InbreedingCoeff=0.8488;MQ=50.43;MQ0=32;MQRankSum=-4.108;QD=7.50;ReadPosRankSum=0.637;VQSLOD=2.4107;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:37:9.68:245,10,0	0/0:15,0:17:30.09:0,30,459	0/0:65,0:13:15.05:0,15,225	0/0:57,0:20:14.11:0,14,282	0/0:23,0:23:35.87:0,36,546	1/1:18,2:38:27.52:482,28,0	1/1:17,0:26:9.03:159,9,0	1/1:0,0:20:15.83:69,16,0	0/0:24,0:24:41.23:0,41,658	0/0:31,0:31:54.17:0,54,839	0/0:24,0:26:29.57:0,30,598	1/1:10,0:15:6.02:120,6,0	0/1:6,0:14:2.28:48,0,2	1/1:7,2:15:9.03:199,9,0	0/0:33,0:33:75.02:0,75,1053	0/0:26,0:26:47.97:0,48,635	0/0:29,0:28:57.07:0,57,801	0/0:15,0:15:4.64:0,5,450	0/0:12,0:8:18.04:0,18,257	0/0:37,0:40:78.22:0,78,1154	0/0:48,0:51:37.32:0,37,741	1/1:9,0:23:21.01:296,21,0	1/1:14,3:28:18.49:364,18,0	1/1:12,2:32:9.48:150,9,0	0/0:29,0:31:54.95:0,55,823	0/0:20,0:21:51.15:0,51,771	0/0:28,0:28:63.15:0,63,967	1/1:0,0:7:3.01:52,3,0
chr10	94990259	.	A	ATT	7986.43	PASS	AB=0.561;AC=39;AF=0.696;AN=56;BaseQRankSum=-3.933;DP=652;FS=1.732;HRun=10;HaplotypeScore=103.2024;InbreedingCoeff=0.7805;MQ=77.51;MQ0=0;MQRankSum=-0.522;QD=15.78;ReadPosRankSum=1.008;VQSLOD=3.4724;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:14:33.03:0,33,335	1/1:3,1:17:2.95:111,3,0	0/0:23,0:22:43.46:0,43,400	0/0:8,0:9:20.78:0,21,195	1/1:4,0:29:53.82:217,54,0	1/1:6,31:43:78.69:1012,79,0	0/1:3,9:14:0.98:296,0,1	0/0:35,0:35:69.83:0,70,254	1/1:4,0:23:39.25:136,39,0	1/1:11,23:37:77.05:1008,77,0	1/1:5,15:24:51.99:580,52,0	1/1:5,9:17:17.55:232,18,0	0/1:3,15:20:0.41:373,0,0	1/1:1,18:21:44.55:583,45,0	1/1:4,0:22:10.40:113,10,0	0/1:7,0:25:35.57:108,0,36	0/0:31,0:31:72.05:0,72,724	0/0:20,0:20:35.91:0,36,358	1/1:2,2:23:54.75:349,55,0	1/1:4,0:23:18.87:181,19,0	1/1:4,0:14:17.47:61,17,0	1/1:4,18:24:56.11:733,56,0	1/1:5,14:19:38.90:581,39,0	1/1:3,12:16:35.61:501,36,0	1/1:6,0:20:32.44:114,32,0	1/1:4,0:31:63.91:390,64,0	1/1:5,0:44:87.52:309,88,0	0/0:14,0:14:32.44:0,32,115
chr10	94990269	.	TG	T	1515.53	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.314;DP=607;FS=0.536;HRun=2;HaplotypeScore=100.0046;InbreedingCoeff=0.9970;MQ=74.95;MQ0=0;MQRankSum=-0.277;QD=34.44;ReadPosRankSum=-2.057;VQSLOD=2.9077;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39.04:0,39,473	0/0:15,0:15:41.86:0,42,339	0/0:17,0:16:45.20:0,45,485	0/0:10,0:10:23.81:0,24,254	0/0:27,0:27:71.74:0,72,604	0/0:38,0:38:89.62:0,90,700	0/0:15,0:15:35.91:0,36,315	1/1:0,30:30:90.27:1132,90,0	0/0:21,0:21:53.82:0,54,418	0/0:28,0:28:62.67:0,63,626	0/0:22,0:22:40.90:0,41,422	0/0:14,0:14:23.94:0,24,201	0/0:21,0:21:33.49:0,33,309	0/0:20,0:20:40.68:0,41,329	0/0:24,0:24:59.78:0,60,496	0/0:26,0:27:80.71:0,81,676	0/0:31,0:31:81.20:0,81,1052	0/0:18,0:18:39.11:0,39,501	0/0:23,0:23:45.57:0,46,461	0/0:24,0:24:35.61:0,36,428	0/0:11,0:11:29.92:0,30,247	0/0:23,0:23:59.49:0,59,472	0/0:20,0:20:56.57:0,57,461	0/0:14,0:14:35.86:0,36,276	0/0:16,0:16:44.86:0,45,364	0/0:28,0:28:36.73:0,37,495	0/0:42,0:42:99:0,114,866	1/1:0,14:14:39.13:505,39,0
chr10	94990582	.	A	AT	6324.01	PASS	AB=0.583;AC=25;AF=0.446;AN=56;BaseQRankSum=-12.316;DP=578;FS=8.676;HRun=9;HaplotypeScore=55.2648;InbreedingCoeff=0.9282;MQ=74.47;MQ0=0;MQRankSum=0.433;QD=23.95;ReadPosRankSum=0.728;VQSLOD=5.4780;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,108,923	1/1:1,5:7:11.32:142,11,0	0/0:10,0:9:7:0,7,118	0/0:17,0:17:38.75:0,39,317	0/1:6,15:21:4.06:390,0,4	0/0:19,0:19:56.97:0,57,491	0/0:27,0:27:65.96:0,66,569	0/0:34,0:34:80.92:0,81,695	1/1:1,17:19:45.12:497,45,0	1/1:4,22:26:66.14:711,66,0	1/1:2,15:17:42.11:465,42,0	0/0:20,0:20:50.98:0,51,440	0/0:22,0:22:62.95:0,63,539	0/0:24,0:24:59.93:0,60,512	1/1:5,25:30:63.04:697,63,0	1/1:2,19:21:50.97:545,51,0	0/0:24,0:24:65.65:0,66,558	0/0:8,0:8:24:0,24,208	1/1:4,21:25:42.68:653,43,0	1/1:3,7:10:21:218,21,0	1/1:4,17:21:48.13:531,48,0	0/0:22,0:22:62.95:0,63,539	0/0:18,0:18:38.99:0,39,338	0/0:17,0:17:38.96:0,39,334	1/1:0,9:9:15.04:166,15,0	1/1:6,20:26:60.12:650,60,0	1/1:5,26:31:40.11:660,40,0	0/0:11,0:11:32.99:0,33,286
chr10	94990911	.	GCC	G	182.98	PASS	AC=12;AF=0.429;AN=28;BaseQRankSum=-3.874;DP=80;FS=9.204;HRun=11;HaplotypeScore=18.9967;InbreedingCoeff=0.4826;MQ=111.02;MQ0=2;MQRankSum=-0.123;QD=9.63;ReadPosRankSum=-0.271;VQSLOD=-0.2052;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:18,0:8:12.94:0,13,94	0/0:14,0:11:4.81:0,5,18	./.	./.	./.	0/0:8,0:8:6.85:0,7,36	0/0:2,0:2:3.01:0,3,40	1/1:1,2:3:6.01:61,6,0	./.	./.	0/0:1,0:1:1.82:0,2,5	./.	0/0:2,0:2:2.37:0,2,8	./.	./.	./.	1/1:0,3:3:7.81:60,8,0	1/1:2,0:2:3:31,3,0	1/1:3,0:3:2.98:32,3,0	./.	./.	./.	0/0:1,0:3:2.50:0,2,9	1/1:1,2:4:5.95:50,6,0	1/1:4,0:4:4.08:59,4,0	0/0:0,0:1:2.50:0,2,9
chr10	94993650	.	AGTGTGT	A	2116.24	PASS	AB=0.744;AC=19;AF=0.365;AN=52;BaseQRankSum=8.726;DP=624;FS=4.111;HRun=0;HaplotypeScore=137.9629;InbreedingCoeff=0.5243;MQ=64.57;MQ0=5;MQRankSum=-4.596;QD=7.70;ReadPosRankSum=2.113;VQSLOD=2.6329;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:4.98:0,5,234	0/1:4,0:8:35.03:38,0,35	./.	./.	0/0:19,0:24:33.10:0,33,889	0/0:20,0:19:24.08:0,24,693	0/0:32,0:32:54.17:0,54,1307	0/0:24,0:23:9:0,9,172	0/0:11,0:21:27.09:0,27,730	1/1:16,5:21:12.04:243,12,0	0/1:14,8:25:0.90:327,0,1	0/0:24,0:24:26.84:0,27,694	0/1:22,0:26:5.78:6,0,664	0/0:24,0:27:39.13:0,39,1107	0/1:15,4:24:24.70:232,0,25	0/1:18,4:26:31.93:171,0,32	0/0:22,0:22:30.10:0,30,722	0/0:5,0:5:12.04:0,12,298	1/1:18,1:19:5.93:103,6,0	1/1:10,5:17:21.62:389,22,0	1/1:26,6:33:2.88:61,3,0	0/0:19,0:19:30.09:0,30,747	0/0:20,0:21:35.24:0,35,957	0/0:21,0:22:36.09:0,36,909	1/1:16,1:21:5.66:66,6,0	1/1:19,8:26:18:294,18,0	1/1:19,7:26:18.06:366,18,0	0/0:10,0:10:9.03:0,9,244
chr10	94995711	.	C	CT	3998.21	PASS	AB=0.712;AC=28;AF=0.500;AN=56;BaseQRankSum=-5.807;DP=559;FS=0.401;HRun=13;HaplotypeScore=71.8069;InbreedingCoeff=0.0931;MQ=70.25;MQ0=1;MQRankSum=0.155;QD=9.59;ReadPosRankSum=-1.758;VQSLOD=2.5664;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,4:22:69.60:70,0,140	0/0:10,0:12:21.85:0,22,135	0/1:15,0:12:1.65:2,0,47	0/0:9,0:9:1.77:0,2,22	0/0:33,1:35:6.38:0,6,420	0/1:9,18:28:10.86:326,0,11	1/1:4,7:11:15.02:139,15,0	0/1:11,10:22:2.38:235,0,2	0/0:14,0:14:25.55:0,26,169	1/1:12,18:34:57.39:473,57,0	1/1:6,20:26:15.74:405,16,0	0/1:5,11:16:14.54:168,0,15	0/1:12,13:25:48.70:258,0,49	1/1:4,10:14:0.43:144,0,0	0/1:20,2:26:11.70:12,0,275	0/0:21,0:21:50.47:0,50,348	0/0:19,1:20:16.68:0,17,259	0/0:8,0:8:17.82:0,18,123	1/1:3,7:10:18.02:167,18,0	0/1:26,9:36:22.55:347,0,23	0/1:5,16:21:14.13:168,0,14	0/1:11,5:19:25.81:180,0,26	0/1:6,11:18:8.29:205,0,8	1/1:3,9:12:0.45:147,0,0	0/0:21,1:23:12.67:0,13,222	1/1:7,14:23:35.65:286,36,0	0/1:14,17:30:28.73:184,0,29	1/1:2,5:7:9.01:84,9,0
chr10	94995848	.	AT	A	1163.68	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.446;DP=523;FS=1.432;HRun=2;HaplotypeScore=49.5706;InbreedingCoeff=0.9970;MQ=72.19;MQ0=0;MQRankSum=-0.734;QD=34.23;ReadPosRankSum=-1.177;VQSLOD=3.1811;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.13:0,39,584	0/0:12,0:12:36.11:0,36,518	0/0:23,0:22:63.17:0,63,872	0/0:16,0:16:42.02:0,42,540	0/0:17,0:17:51.17:0,51,764	0/0:29,0:29:84.28:0,84,1255	0/0:20,0:20:60.19:0,60,877	1/1:1,23:24:69.22:896,69,0	0/0:14,0:14:42.14:0,42,629	0/0:27,0:27:78.26:0,78,1152	0/0:24,0:24:72.23:0,72,1060	0/0:11,0:11:33.10:0,33,475	0/0:18,0:18:54.18:0,54,807	0/0:27,0:27:81.26:0,81,1192	0/0:28,0:28:81.27:0,81,1214	0/0:29,0:29:87.29:0,87,1286	0/0:14,0:14:42.13:0,42,609	0/0:7,0:7:21.07:0,21,315	0/0:18,0:18:54.17:0,54,788	0/0:19,0:19:57.19:0,57,853	0/0:13,0:13:39.11:0,39,544	0/0:10,0:10:30.10:0,30,450	0/0:18,0:18:54.18:0,54,808	0/0:14,0:14:39.13:0,39,584	0/0:23,0:23:69.23:0,69,1031	0/0:22,0:22:66.22:0,66,972	0/0:23,0:23:66.18:0,66,963	1/1:0,10:10:30.10:389,30,0
chr10	94996576	.	AAACAAC	A	4788.56	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=12.030;DP=597;FS=5.633;HRun=0;HaplotypeScore=133.8686;InbreedingCoeff=0.8174;MQ=60.43;MQ0=5;MQRankSum=-9.196;QD=13.96;ReadPosRankSum=1.900;VQSLOD=3.7700;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,3:22:5.87:78,6,0	0/0:9,0:9:18.06:0,18,567	0/0:28,0:21:1.82:0,2,5	0/0:16,0:10:3.01:0,3,32	0/0:37,0:37:66.16:0,66,1795	1/1:9,20:29:24.08:488,24,0	1/1:7,7:14:6.02:122,6,0	0/0:34,0:33:42.11:0,42,642	0/0:14,0:15:36.06:0,36,980	1/1:8,0:20:26.68:344,27,0	1/1:10,0:21:33:429,33,0	1/1:9,13:22:27.09:542,27,0	1/1:10,9:19:15.05:305,15,0	1/1:7,18:24:24.08:487,24,0	0/0:28,0:28:44.98:0,45,1205	0/0:23,0:22:39.12:0,39,1117	0/0:20,0:20:26.99:0,27,941	0/0:16,0:16:22.86:0,23,618	1/1:13,0:20:9.46:127,9,0	1/1:15,0:30:33.06:435,33,0	1/1:5,0:12:6.02:84,6,0	1/1:14,6:20:15.01:263,15,0	1/1:11,17:28:21.01:426,21,0	0/1:13,0:13:16.07:34,0,16	0/0:20,0:20:36.12:0,36,1112	1/1:12,0:22:21.07:291,21,0	1/1:10,0:25:24.08:335,24,0	0/0:8,0:8:12.04:0,12,227
chr10	94997261	.	A	AT	1220.91	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.598;DP=523;FS=0.615;HRun=8;HaplotypeScore=50.8462;InbreedingCoeff=0.9784;MQ=67.18;MQ0=0;MQRankSum=-0.070;QD=25.44;ReadPosRankSum=-4.193;VQSLOD=2.4271;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:20:41.02:0,41,358	0/0:13,0:13:30.01:0,30,275	0/0:6,0:6:12:0,12,109	0/0:11,0:11:23.01:0,23,190	0/0:22,0:22:57:0,57,513	0/0:26,0:25:69.01:0,69,626	0/0:11,0:11:30.02:0,30,275	1/1:5,31:35:93.24:1044,93,0	0/0:17,0:17:41.99:0,42,375	0/0:18,0:18:39.02:0,39,357	0/0:19,0:20:50.06:0,50,445	0/0:22,0:22:60.01:0,60,544	0/0:20,0:21:50.05:0,50,445	0/0:11,0:11:27.01:0,27,247	0/0:15,0:15:33.02:0,33,302	0/0:24,0:24:69.03:0,69,631	0/0:14,0:14:36.02:0,36,330	0/0:7,0:7:21.01:0,21,192	0/0:23,0:24:65.06:0,65,578	0/0:27,0:27:75.04:0,75,685	0/0:20,0:20:54.01:0,54,488	0/0:14,0:14:36:0,36,325	0/0:23,0:23:57.02:0,57,522	0/0:13,0:13:27.01:0,27,247	0/0:14,0:14:36.02:0,36,329	0/0:29,0:30:83.07:0,83,747	0/0:31,0:31:71.06:0,71,637	1/1:1,11:12:27.05:298,27,0
chr10	94997542	.	T	TGCGC	3156.40	PASS	AB=0.977;AC=26;AF=0.464;AN=56;BaseQRankSum=12.439;DP=666;FS=11.033;HRun=0;HaplotypeScore=148.2785;InbreedingCoeff=-0.2725;MQ=54.67;MQ0=24;MQRankSum=-7.674;QD=6.45;ReadPosRankSum=10.297;VQSLOD=0.3396;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:84.18:0,84,1358	0/1:5,0:5:12.92:17,0,13	0/0:41,0:16:37.30:0,37,574	0/0:22,0:7:11.63:0,12,166	0/1:19,0:19:0.41:22,0,0	0/1:18,0:19:99:136,0,178	0/1:37,0:36:76.39:76,0,897	0/0:23,0:23:66.63:0,67,957	0/1:29,0:29:97.53:98,0,146	0/1:16,0:15:55.40:347,0,55	1/1:12,0:12:14.17:108,14,0	0/1:26,0:26:43.02:43,0,455	0/1:19,0:19:67.45:67,0,391	0/1:24,0:24:58.61:59,0,190	1/1:35,0:35:3.34:230,3,0	1/1:23,0:22:24.55:108,25,0	0/0:41,0:41:99:0,111,1984	0/0:14,0:14:39.08:0,39,662	0/1:20,0:17:99:332,0,136	1/1:22,0:22:20.50:286,21,0	0/1:21,14:36:99:162,0,201	0/1:15,0:15:35.01:35,0,267	0/1:13,0:13:28.82:29,0,209	0/1:48,0:48:99:217,0,561	0/1:26,0:26:45.46:45,0,49	0/1:19,0:19:75.52:425,0,76	0/1:15,1:16:13.32:476,0,13	0/1:9,0:9:9.27:9,0,216
chr10	94997544	.	T	TGTGCGCGC	8045.26	PASS	AB=0.722;AC=25;AF=0.446;AN=56;BaseQRankSum=1.842;DP=692;FS=1.779;HRun=0;HaplotypeScore=177.7355;InbreedingCoeff=0.6192;MQ=54.52;MQ0=23;MQRankSum=-9.313;QD=23.80;ReadPosRankSum=3.218;VQSLOD=4.2623;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:84.75:0,85,1897	0/1:1,0:6:18.52:84,0,19	0/0:38,0:13:38.62:0,39,814	0/0:21,0:7:15.05:0,15,266	0/1:0,0:23:10.91:35,0,11	0/1:19,0:19:36.50:36,0,355	0/0:36,0:35:78.86:0,79,1324	0/0:23,0:23:60.18:0,60,1204	0/1:7,0:31:55.63:400,0,56	1/1:6,9:19:41.80:1064,42,0	1/1:1,11:13:6.02:264,6,0	0/0:25,0:25:40.73:0,41,737	0/0:19,0:19:40.40:0,40,666	0/0:25,0:25:25.70:0,26,303	1/1:1,0:41:54.07:737,54,0	1/1:2,0:23:27.09:400,27,0	0/0:42,0:42:99:0,111,2683	0/0:14,0:14:36.08:0,36,874	1/1:4,11:18:43.96:942,44,0	1/1:2,16:22:17.27:730,17,0	1/1:36,1:39:10.49:319,10,0	0/0:14,0:14:26.57:0,27,436	0/0:13,0:13:23.40:0,23,391	0/0:47,0:47:79.41:0,79,1028	1/1:2,0:27:20.84:302,21,0	1/1:3,14:24:57.18:1281,57,0	1/1:5,9:19:35.89:1411,36,0	0/1:9,0:9:41.18:41,0,232
chr10	94997933	.	G	GAAA	1247.77	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.596;DP=533;FS=5.056;HRun=10;HaplotypeScore=77.3353;InbreedingCoeff=0.9170;MQ=71.67;MQ0=0;MQRankSum=0.453;QD=33.72;ReadPosRankSum=-2.964;VQSLOD=2.5956;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:60.09:0,60,696	0/0:11,0:12:31.44:0,31,389	0/0:13,0:13:20.57:0,21,226	0/0:13,0:11:4.75:0,5,67	0/0:34,0:34:93.25:0,93,1130	0/0:17,0:18:31.39:0,31,393	0/0:17,0:17:45.11:0,45,547	1/1:10,21:31:63.20:1168,63,0	0/0:14,0:14:36.09:0,36,437	0/0:22,0:22:48:0,48,559	0/0:18,0:18:54.17:0,54,657	0/0:22,0:23:55.47:0,55,677	0/0:13,0:13:36.10:0,36,426	0/0:24,0:24:60.13:0,60,717	0/0:25,0:25:66.14:0,66,779	0/0:23,0:23:63.18:0,63,766	0/0:18,0:18:42.07:0,42,510	0/0:15,0:15:36.07:0,36,437	0/0:16,0:17:42.02:0,42,492	0/0:21,0:24:38.62:0,39,673	0/0:14,0:14:36.07:0,36,437	0/0:13,0:13:30.04:0,30,365	0/0:14,0:14:42.12:0,42,499	0/0:14,0:14:39.12:0,39,474	0/0:24,0:24:69.20:0,69,839	0/0:26,0:26:42.79:0,43,742	0/0:25,0:26:61.52:0,62,761	1/1:1,4:6:12.02:196,12,0
chr10	94998368	.	ACAGATTGAAACGT	A	13605.65	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.945;DP=759;FS=8.156;HRun=0;HaplotypeScore=282.0758;InbreedingCoeff=0.9889;MQ=86.44;MQ0=0;MQRankSum=-15.855;QD=61.84;ReadPosRankSum=0.466;VQSLOD=3.2992;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,99,6039	0/0:10,0:10:21.07:0,21,1246	0/0:32,0:32:69.24:0,69,3505	0/0:25,0:25:54.19:0,54,2581	0/0:27,0:27:69.22:0,69,3969	1/1:5,16:21:45.15:1707,45,0	1/1:7,13:20:27.09:1024,27,0	1/1:18,10:28:30.10:974,30,0	0/0:33,0:33:69.24:0,69,4127	0/0:29,0:29:69.24:0,69,4098	0/0:17,0:17:42.14:0,42,2319	1/1:12,23:35:69.19:2523,69,0	1/1:10,26:36:72.25:2731,72,0	1/1:9,19:28:45.15:1707,45,0	0/0:45,0:45:99:0,111,6272	0/0:33,0:33:87.27:0,87,4637	0/0:31,0:31:84.27:0,84,5091	0/0:25,0:25:60.21:0,60,3669	0/0:23,0:23:42.14:0,42,2382	0/0:15,0:15:42.13:0,42,2328	0/0:51,0:51:99:0,138,7672	1/1:2,12:14:24.08:910,24,0	1/1:3,11:14:30.10:1082,30,0	1/1:7,12:19:18.06:606,18,0	0/0:29,0:28:72.25:0,72,4230	0/0:30,0:30:78.27:0,78,4450	0/0:46,0:46:99:0,105,6449	1/1:2,3:5:9.03:341,9,0
chr10	94999911	.	AT	A	1469.76	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.445;DP=560;FS=32.375;HRun=7;HaplotypeScore=55.0265;InbreedingCoeff=0.9951;MQ=68.99;MQ0=0;MQRankSum=0.231;QD=25.34;ReadPosRankSum=-0.698;VQSLOD=1.4923;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:54.11:0,54,645	0/0:10,0:10:30.10:0,30,377	0/0:11,0:11:30.07:0,30,343	0/0:17,0:16:42.13:0,42,522	0/0:17,0:17:45.14:0,45,555	0/0:21,0:21:57.18:0,57,717	0/0:17,0:17:45.14:0,45,554	1/1:4,32:36:96.21:979,96,0	0/0:15,0:15:45.14:0,45,566	0/0:25,0:25:66.21:0,66,830	0/0:19,0:19:54.17:0,54,679	0/0:22,0:22:57.18:0,57,717	0/0:15,0:15:45.14:0,45,566	0/0:18,0:18:51.16:0,51,630	0/0:30,0:30:81.25:0,81,1007	0/0:19,0:19:51.16:0,51,631	0/0:25,0:25:69.16:0,69,834	0/0:21,0:21:51.16:0,51,639	0/0:17,0:17:36.10:0,36,427	0/0:34,0:34:87.28:0,87,1094	0/0:7,0:7:18.06:0,18,226	0/0:12,0:12:36.07:0,36,435	0/0:22,0:22:60.18:0,60,742	0/0:14,0:14:39.12:0,39,491	0/0:17,0:17:48.14:0,48,579	0/0:28,0:28:78.23:0,78,959	0/0:30,0:29:87.27:0,87,1081	1/1:2,20:22:60.14:612,60,0
chr10	95003123	.	AT	A	1030.68	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=7.497;DP=485;FS=0.000;HRun=1;HaplotypeScore=43.4894;InbreedingCoeff=0.8018;MQ=67.20;MQ0=1;MQRankSum=1.584;QD=25.14;ReadPosRankSum=-3.345;VQSLOD=2.4773;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.20:0,72,993	0/0:10,0:10:30.10:0,30,423	0/0:4,0:4:8.98:0,9,101	0/1:5,0:4:4.99:5,0,66	0/0:30,0:30:90.29:0,90,1296	0/0:18,0:18:54.18:0,54,789	0/0:13,0:13:39.05:0,39,471	1/1:0,28:27:69.12:815,69,0	0/0:16,0:16:48.16:0,48,700	0/0:29,0:29:87.29:0,87,1258	0/0:19,0:19:57.16:0,57,778	0/0:13,0:13:39.13:0,39,554	0/0:17,0:17:51.15:0,51,710	0/0:9,0:9:27.08:0,27,375	0/0:25,0:25:75.18:0,75,998	0/0:31,0:31:93.26:0,93,1283	0/0:11,0:11:33.06:0,33,455	0/0:17,0:17:45.11:0,45,633	0/0:15,0:15:45.13:0,45,625	0/0:31,0:31:90.26:0,90,1245	0/0:13,0:13:39.13:0,39,570	0/0:11,0:11:33.10:0,33,463	0/0:18,0:18:54.17:0,54,770	0/0:9,0:9:27.09:0,27,393	0/0:14,0:14:42.14:0,42,612	0/0:21,0:21:63.21:0,63,904	0/0:26,0:24:78.22:0,78,1072	1/1:0,8:8:24.08:335,24,0
chr10	95005397	.	C	CG	2382.38	PASS	AB=0.977;AC=22;AF=0.393;AN=56;BaseQRankSum=-10.624;DP=624;FS=32.963;HRun=0;HaplotypeScore=88.5542;InbreedingCoeff=-0.4437;MQ=60.90;MQ0=19;MQRankSum=-2.782;QD=5.34;ReadPosRankSum=-11.450;VQSLOD=-0.4146;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,107,1306	0/1:8,0:7:10.58:11,0,20	0/0:18,0:6:1.49:0,1,55	0/0:27,0:12:8.93:0,9,98	0/1:33,0:33:63.27:63,0,146	0/1:15,0:15:45.03:45,0,48	0/1:24,0:22:17.87:18,0,80	1/1:6,36:40:97.65:1273,98,0	0/1:24,0:21:46.36:121,0,46	0/1:12,0:12:2.72:117,0,3	0/1:20,0:20:29.74:30,0,111	0/1:15,0:15:30.73:68,0,31	0/1:19,0:18:11.34:11,0,89	0/0:14,0:14:28.74:0,29,90	0/1:23,0:23:37.09:37,0,63	0/1:22,0:22:6.43:6,0,80	0/0:31,0:29:78.15:0,78,990	0/0:27,0:26:72.16:0,72,924	0/1:21,0:20:21.68:22,0,83	0/1:32,0:30:10.50:10,0,145	0/1:16,0:15:46.59:47,0,49	0/1:20,0:19:25.59:77,0,26	0/1:22,0:20:1.25:1,0,83	0/0:17,0:16:0.83:0,1,41	0/1:23,0:22:15.76:16,0,79	0/1:19,0:19:59.87:60,0,65	0/1:21,0:21:20.78:21,0,101	0/1:2,13:14:5.07:482,0,5
chr10	95007033	.	A	AC	509.46	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=0.365;DP=536;FS=11.943;HRun=3;HaplotypeScore=88.6323;InbreedingCoeff=0.9939;MQ=50.97;MQ0=18;MQRankSum=-4.101;QD=20.38;ReadPosRankSum=-2.202;VQSLOD=1.9838;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:99:0,99,1177	0/0:7,0:7:21.06:0,21,252	./.	./.	0/0:27,0:27:63.08:0,63,719	0/0:12,0:12:36.11:0,36,432	0/0:22,0:20:54.14:0,54,633	1/1:5,10:8:24.08:335,24,0	0/0:23,0:23:57.17:0,57,683	0/0:28,0:27:66.17:0,66,772	0/0:25,0:25:57.12:0,57,653	0/0:19,0:19:57.16:0,57,671	0/0:21,0:20:51.16:0,51,610	0/0:30,0:30:69.21:0,69,827	0/0:19,0:19:54.17:0,54,647	0/0:15,0:15:36.11:0,36,432	0/0:26,0:26:75.20:0,75,883	0/0:24,0:23:63.19:0,63,755	0/0:19,0:15:45.10:0,45,506	0/0:25,0:24:72.18:0,72,847	0/0:12,0:12:29.91:0,30,323	0/0:12,0:12:30.09:0,30,360	0/0:19,0:18:35.72:0,36,431	0/0:31,0:30:75.23:0,75,897	0/0:17,0:16:36.11:0,36,431	0/0:17,0:17:47.93:0,48,541	0/0:19,0:19:39.10:0,39,455	1/1:3,7:9:21.07:293,21,0
chr10	95007724	.	C	CG	953.84	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.021;DP=549;FS=5.324;HRun=3;HaplotypeScore=51.2734;InbreedingCoeff=0.9681;MQ=87.32;MQ0=0;MQRankSum=-2.580;QD=29.81;ReadPosRankSum=-2.716;VQSLOD=1.9562;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.25:0,84,996	0/0:4,0:4:12.04:0,12,144	0/0:18,0:18:45.08:0,45,508	0/0:20,0:20:54.09:0,54,608	0/0:22,0:22:66.15:0,66,774	0/0:15,0:15:42.13:0,42,503	0/0:18,0:18:54.15:0,54,635	1/1:4,23:27:66.19:903,66,0	0/0:16,0:16:48.14:0,48,565	0/0:25,0:25:68.02:0,68,796	0/0:15,0:15:42.09:0,42,477	0/0:15,0:15:45.13:0,45,528	0/0:13,0:13:36.10:0,36,420	0/0:21,0:21:60.18:0,60,716	0/0:14,0:14:39.06:0,39,440	0/0:27,0:27:78.24:0,78,936	0/0:24,0:23:72.22:0,72,862	0/0:15,0:15:39.12:0,39,466	0/0:20,0:20:54.16:0,54,647	0/0:30,0:30:87.25:0,87,1031	0/0:25,0:25:72.21:0,72,853	0/0:22,0:22:63.19:0,63,755	0/0:13,0:13:39.12:0,39,468	0/0:22,0:22:63.15:0,63,739	0/0:22,0:22:63.16:0,63,733	0/0:23,0:23:66.18:0,66,771	0/0:27,0:27:75.23:0,75,897	1/1:0,5:5:12.04:168,12,0
chr10	95011679	.	CTT	C	2650.97	PASS	AB=0.852;AC=13;AF=0.250;AN=52;BaseQRankSum=0.186;DP=594;FS=9.867;HRun=3;HaplotypeScore=178.1314;InbreedingCoeff=-0.3053;MQ=44.44;MQ0=16;MQRankSum=-0.830;QD=8.06;ReadPosRankSum=0.626;VQSLOD=-0.5092;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:37:97.82:0,98,1650	0/0:8,0:8:18.06:0,18,285	./.	./.	0/1:45,1:39:99:178,0,1086	0/0:24,1:24:37.37:0,37,928	0/0:16,1:14:36.10:0,36,620	0/1:33,0:30:99:227,0,922	0/1:25,0:25:98.38:98,0,522	0/1:19,7:28:68.76:387,0,69	0/1:6,7:19:14.35:305,0,14	0/0:16,0:16:42.06:0,42,674	0/0:21,0:21:51.61:0,52,837	0/0:22,0:21:57.11:0,57,939	0/1:32,0:32:99:193,0,534	0/0:17,0:16:12.90:0,13,442	0/0:16,0:13:12.28:0,12,68	0/0:10,0:10:17.97:0,18,271	0/1:11,2:14:60.63:156,0,61	0/1:18,7:29:93:368,0,93	0/1:5,1:5:7.15:19,0,7	0/0:28,0:27:54.08:0,54,969	0/0:23,0:23:48.12:0,48,803	0/0:17,0:17:18.19:0,18,320	0/1:30,0:29:49.47:49,0,904	0/1:12,7:21:99:289,0,128	0/1:17,5:30:96.56:507,0,97	0/1:13,0:12:22.79:23,0,204
chr10	95011683	.	CTT	C	4347.34	PASS	AB=0.996;AC=22;AF=0.423;AN=52;BaseQRankSum=-1.911;DP=596;FS=19.483;HRun=3;HaplotypeScore=181.9048;InbreedingCoeff=0.3766;MQ=44.29;MQ0=18;MQRankSum=-1.889;QD=12.04;ReadPosRankSum=0.563;VQSLOD=0.4428;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:36:97.50:0,97,1289	0/0:7,0:7:14.24:0,14,128	./.	./.	0/1:45,0:38:99:199,0,463	0/0:26,0:25:29.25:0,29,644	0/0:19,0:16:38.01:0,38,420	0/1:33,1:30:99:245,0,372	0/1:23,0:23:99:128,0,194	1/1:32,0:31:61.54:632,62,0	1/1:19,0:19:41.54:454,42,0	0/0:16,0:16:42.87:0,43,471	0/0:19,0:19:49.32:0,49,660	0/0:23,0:22:60.07:0,60,819	0/1:32,0:32:99:220,0,169	0/1:18,0:16:55.23:55,0,104	1/1:4,11:13:21.07:320,21,0	0/0:10,0:10:15.13:0,15,174	1/1:15,0:14:35.05:387,35,0	1/1:28,0:28:46.25:462,46,0	0/1:6,0:5:5.86:19,0,6	0/0:31,0:30:53.87:0,54,740	0/0:25,0:25:48.10:0,48,670	0/0:15,0:15:10.48:0,10,199	0/1:27,0:26:84.65:85,0,382	1/1:23,1:23:40.39:408,40,0	1/1:29,0:29:63.25:703,63,0	0/1:13,0:12:29.05:29,0,40
chr10	95011685	.	TTCTCTCTCTCTCTCTC	T	2890.98	PASS	AB=0.981;AC=15;AF=0.288;AN=52;BaseQRankSum=-9.670;DP=600;FS=10.800;HRun=0;HaplotypeScore=327.6145;InbreedingCoeff=-0.2195;MQ=43.92;MQ0=19;MQRankSum=-0.655;QD=9.87;ReadPosRankSum=-9.532;VQSLOD=-0.4850;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:37:92.50:0,93,3264	1/1:7,0:7:15.04:304,15,0	./.	./.	0/1:43,0:38:99:420,0,975	0/1:27,0:26:53.88:54,0,1083	0/1:20,0:17:99:189,0,340	0/0:35,0:31:17.54:0,18,1611	0/0:23,0:23:38.45:0,38,1069	0/0:32,0:31:92.80:0,93,1597	0/0:20,0:20:38.27:0,38,680	0/1:16,0:16:46.26:46,0,1177	0/1:18,0:18:99:217,0,849	0/1:23,0:22:99:127,0,1468	0/1:32,0:33:99:857,0,1435	0/1:18,0:16:99:389,0,154	0/0:16,0:13:24:0,24,719	0/1:10,0:10:8.88:9,0,637	0/0:14,0:13:39.04:0,39,776	0/0:27,0:27:61.68:0,62,901	0/1:5,0:4:12.35:12,0,69	0/1:21,10:30:55.68:56,0,1239	0/0:18,7:26:48.30:0,48,1002	0/1:15,0:15:99:201,0,150	0/1:24,0:24:99:168,0,1189	0/0:26,0:24:69.16:0,69,1110	0/0:30,0:30:72.47:0,72,868	0/0:13,0:12:10.30:0,10,556
chr10	95011687	.	C	CTT	4305.10	PASS	AB=0.957;AC=28;AF=0.538;AN=52;BaseQRankSum=2.316;DP=594;FS=9.493;HRun=3;HaplotypeScore=190.6370;InbreedingCoeff=-0.3662;MQ=43.69;MQ0=20;MQRankSum=-1.074;QD=8.47;ReadPosRankSum=-2.085;VQSLOD=0.0976;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:38:85.92:0,86,1137	1/1:6,1:7:12.01:131,12,0	./.	./.	1/1:41,4:38:38.23:651,38,0	0/1:27,0:26:99:194,0,247	0/1:20,0:17:99:147,0,119	0/1:33,0:29:99:225,0,122	0/1:18,3:21:36.57:315,0,37	0/1:33,0:32:38.23:38,0,482	0/1:21,0:21:59.73:60,0,327	0/1:14,0:14:99:127,0,183	0/1:16,2:18:99:209,0,116	0/1:23,0:22:99:173,0,184	1/1:32,1:33:18.67:488,19,0	0/1:15,3:16:6.34:286,0,6	0/0:16,0:13:20.95:0,21,168	0/1:11,0:10:2.05:2,0,156	0/1:14,0:13:80.59:81,0,145	0/1:26,0:26:21.85:22,0,364	0/1:6,0:5:9.28:9,0,19	0/1:31,0:30:99:242,0,125	0/1:26,0:26:78.06:220,0,78	1/1:15,0:15:4.06:47,4,0	1/1:23,2:24:9.38:381,9,0	0/0:26,0:24:11.08:0,11,402	0/1:28,0:28:81.76:82,0,327	0/1:4,9:12:7.91:176,0,8
chr10	95011697	.	C	CTT	2249.96	PASS	AB=0.969;AC=21;AF=0.404;AN=52;BaseQRankSum=4.261;DP=590;FS=1.698;HRun=1;HaplotypeScore=203.4498;InbreedingCoeff=-0.2370;MQ=43.38;MQ0=19;MQRankSum=-6.032;QD=5.33;ReadPosRankSum=1.557;VQSLOD=-0.2498;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:37:94.10:0,94,1158	1/1:5,0:5:10.80:64,11,0	./.	./.	0/1:28,11:32:99:211,0,112	0/1:24,0:23:69.34:69,0,379	0/1:20,0:17:67.81:68,0,201	0/1:33,0:29:43.04:43,0,289	0/1:15,6:22:81.12:280,0,81	0/1:30,0:29:52.14:52,0,201	0/1:23,0:23:56.31:135,0,56	0/1:16,0:16:59.69:60,0,256	0/0:16,0:16:21.15:0,21,321	0/0:23,0:22:7.42:0,7,477	1/1:26,6:32:24.31:655,24,0	1/1:17,0:15:27.99:234,28,0	0/0:17,0:14:9.91:0,10,192	0/0:11,0:10:20.90:0,21,195	0/1:20,0:19:82.94:83,0,85	0/1:27,0:27:64.90:65,0,102	0/0:5,0:4:2.90:0,3,16	0/0:31,0:30:22.29:0,22,454	0/0:25,0:25:42.64:0,43,434	0/1:14,0:14:23.24:23,0,92	0/1:27,0:26:99:128,0,139	0/1:30,0:28:10.22:10,0,198	0/1:28,0:28:77:186,0,77	0/1:15,0:14:49.77:50,0,55
chr10	95011703	.	CTTTCTTTCTT	C	5992.80	PASS	AB=0.972;AC=24;AF=0.462;AN=52;BaseQRankSum=-2.452;DP=599;FS=0.835;HRun=0;HaplotypeScore=265.9683;InbreedingCoeff=0.1660;MQ=44.03;MQ0=21;MQRankSum=-1.709;QD=15.33;ReadPosRankSum=0.600;VQSLOD=3.2078;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:67.73:0,68,2383	0/1:5,0:5:30.30:30,0,51	./.	./.	0/1:35,0:31:61.66:62,0,624	0/0:24,0:23:19.46:0,19,1152	0/0:20,0:17:15.08:0,15,607	0/1:31,0:26:99:263,0,245	0/1:19,0:22:99:124,0,751	1/1:11,19:29:42.75:1268,43,0	1/1:15,9:24:1.64:522,2,0	0/0:17,0:18:25.36:0,25,938	0/1:16,0:16:9.22:9,0,399	0/0:25,0:24:29.26:0,29,822	0/0:32,0:32:47.04:0,47,1853	0/1:16,0:15:65.07:65,0,573	0/0:18,0:15:15.03:0,15,336	0/0:11,0:10:17.99:0,18,584	1/1:12,9:19:22.29:499,22,0	1/1:11,17:28:20.34:763,20,0	1/1:1,0:4:3.01:91,3,0	0/1:29,0:29:24.11:24,0,602	0/1:24,0:24:16.69:17,0,363	0/0:17,0:17:29.45:0,29,369	0/1:26,0:25:85.43:85,0,463	1/1:13,18:29:33.61:1183,34,0	1/1:15,13:28:34.86:945,35,0	0/1:15,0:14:43.93:44,0,583
chr10	95014437	.	AAAAAT	A	3452.39	PASS	AC=36;AF=0.857;AN=42;BaseQRankSum=6.104;DP=325;FS=4.127;HRun=0;HaplotypeScore=70.5025;InbreedingCoeff=0.6020;MQ=71.85;MQ0=2;MQRankSum=2.556;QD=17.09;ReadPosRankSum=-0.201;VQSLOD=2.7060;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,8:16:18.06:305,18,0	1/1:1,4:5:12.04:215,12,0	./.	./.	1/1:6,6:12:15.05:269,15,0	1/1:9,12:21:30.10:538,30,0	1/1:2,0:2:3:25,3,0	0/0:32,0:32:8.91:0,9,64	./.	1/1:8,5:13:15.04:227,15,0	1/1:12,2:14:3.01:54,3,0	1/1:5,2:7:3.01:54,3,0	1/1:4,3:7:9.03:161,9,0	1/1:7,2:9:3.01:54,3,0	1/1:7,3:10:3.01:54,3,0	./.	0/0:27,0:27:54.09:0,54,1299	0/0:19,0:19:29.89:0,30,519	1/1:16,7:23:18.06:305,18,0	1/1:6,2:8:6.02:108,6,0	./.	./.	./.	1/1:3,2:5:6.02:108,6,0	1/1:5,6:11:15.05:269,15,0	1/1:17,7:24:21.07:355,21,0	1/1:4,2:6:6.02:108,6,0	1/1:2,0:9:21.06:244,21,0
chr10	95014756	.	GTA	G	1920.43	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=9.792;DP=568;FS=35.535;HRun=0;HaplotypeScore=66.4835;InbreedingCoeff=0.8431;MQ=66.86;MQ0=3;MQRankSum=-0.901;QD=25.61;ReadPosRankSum=-2.660;VQSLOD=1.7633;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.23:0,66,1244	0/0:11,0:11:33.11:0,33,637	0/1:26,0:12:1.86:2,0,161	0/0:42,0:11:15.03:0,15,221	0/0:20,0:20:60.21:0,60,1157	0/0:19,0:19:54.18:0,54,1032	0/0:10,0:10:27.08:0,27,459	1/1:1,32:33:93.25:1307,93,0	0/0:15,0:15:45.15:0,45,867	0/0:22,0:22:66.22:0,66,1243	0/0:19,0:19:57.18:0,57,1052	0/0:18,0:18:45.15:0,45,852	0/0:16,0:16:48.15:0,48,883	0/0:25,0:25:75.24:0,75,1403	0/0:21,0:21:63.20:0,63,1174	0/0:14,0:14:42.14:0,42,802	0/0:19,0:19:54.19:0,54,1021	0/0:11,0:11:30.10:0,30,579	0/0:23,0:22:60.19:0,60,1122	0/0:23,0:23:69.22:0,69,1280	0/0:16,0:16:48.16:0,48,926	0/0:9,0:9:27.09:0,27,520	0/0:20,0:20:57.20:0,57,1100	0/0:5,0:5:15.05:0,15,290	0/0:15,0:14:45.15:0,45,869	0/0:33,0:33:96.30:0,96,1760	0/0:44,0:44:99:0,132,2432	1/1:0,16:16:48.16:734,48,0
chr10	95014836	.	A	AT	2191.57	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-11.613;DP=546;FS=9.929;HRun=2;HaplotypeScore=52.5908;InbreedingCoeff=0.9986;MQ=79.25;MQ0=0;MQRankSum=-0.161;QD=38.45;ReadPosRankSum=-3.426;VQSLOD=2.1199;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.17:0,78,934	0/0:14,0:14:42.13:0,42,521	0/0:15,0:15:39.08:0,39,454	0/0:16,0:16:42.13:0,42,517	0/0:30,0:30:90.28:0,90,1116	0/0:27,0:27:78.23:0,78,945	0/0:17,0:17:48.15:0,48,595	1/1:0,43:43:99:1838,129,0	0/0:14,0:14:42.13:0,42,521	0/0:20,0:20:54.15:0,54,649	0/0:20,0:20:57.17:0,57,694	0/0:22,0:22:66.19:0,66,803	0/0:18,0:18:51.16:0,51,632	0/0:18,0:18:51.15:0,51,619	0/0:20,0:20:60.19:0,60,744	0/0:19,0:19:57.17:0,57,694	0/0:10,0:10:30.09:0,30,371	0/0:10,0:10:27.08:0,27,334	0/0:19,0:18:42.13:0,42,521	0/0:28,0:28:84.26:0,84,1031	0/0:18,0:18:51.15:0,51,619	0/0:12,0:12:36.11:0,36,446	0/0:10,0:10:30.09:0,30,372	0/0:12,0:12:36.11:0,36,446	0/0:17,0:17:48.14:0,48,583	0/0:24,0:24:69.21:0,69,844	0/0:31,0:31:87.24:0,87,1052	1/1:3,11:14:33.11:475,33,0
chr10	95017665	.	TCA	T	1435.07	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.516;DP=600;FS=1.376;HRun=0;HaplotypeScore=73.2580;InbreedingCoeff=0.9986;MQ=83.97;MQ0=0;MQRankSum=-4.615;QD=36.80;ReadPosRankSum=-2.083;VQSLOD=4.7272;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.19:0,54,1030	0/0:13,0:13:39.10:0,39,685	0/0:13,0:13:39.13:0,39,739	0/0:24,0:24:71.65:0,72,1182	0/0:24,0:24:72.23:0,72,1357	0/0:22,0:22:66.21:0,66,1240	0/0:22,0:22:63.20:0,63,1183	1/1:0,27:27:75.22:1097,75,0	0/0:24,0:24:63.19:0,63,1140	0/0:28,0:28:81.27:0,81,1533	0/0:19,0:19:57.18:0,57,1067	0/0:26,0:26:78.25:0,78,1460	0/0:30,0:30:90.28:0,90,1653	0/0:17,0:17:51.17:0,51,968	0/0:28,0:28:72.22:0,72,1324	0/0:19,0:19:57.20:0,57,1100	0/0:22,0:22:66.21:0,66,1206	0/0:15,0:15:42.14:0,42,805	0/0:17,0:17:51.17:0,51,956	0/0:30,0:30:90.27:0,90,1667	0/0:22,0:22:66.17:0,66,1126	0/0:14,0:14:39.13:0,39,735	0/0:28,0:28:84.27:0,84,1587	0/0:8,0:8:24.08:0,24,462	0/0:21,0:21:63.19:0,63,1151	0/0:27,0:27:81.26:0,81,1502	0/0:29,0:29:87.28:0,87,1643	1/1:0,12:12:30.10:459,30,0
chr10	95017918	.	AT	A	907.50	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.769;DP=464;FS=7.043;HRun=10;HaplotypeScore=44.4319;InbreedingCoeff=0.8528;MQ=68.83;MQ0=1;MQRankSum=0.078;QD=16.81;ReadPosRankSum=-2.860;VQSLOD=2.7795;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:21.06:0,21,232	0/0:4,0:4:9.02:0,9,100	0/0:8,0:5:0:0,0,0	0/0:12,0:10:5.95:0,6,51	0/0:21,0:21:63.17:0,63,694	0/0:21,0:22:66:0,66,702	0/0:9,0:9:24.06:0,24,265	1/1:6,32:37:92.89:794,93,0	0/0:15,0:15:45.11:0,45,491	0/0:20,1:21:31.10:0,31,571	0/0:27,0:27:69.19:0,69,763	0/0:14,0:14:39.09:0,39,417	0/0:17,0:17:48.11:0,48,511	0/0:19,0:19:54.12:0,54,581	0/0:12,0:12:30.08:0,30,332	0/0:14,0:14:36.04:0,36,370	0/0:10,0:10:24.05:0,24,256	0/0:13,0:13:25.06:0,25,331	0/0:22,1:23:31.10:0,31,570	0/0:40,0:40:99:0,108,1164	0/0:8,0:8:21.04:0,21,224	0/0:11,0:11:21.06:0,21,232	0/0:18,0:18:51.13:0,51,558	0/0:8,0:8:24.06:0,24,266	0/0:14,1:15:16.06:0,16,405	0/0:22,0:23:63:0,63,678	0/0:18,0:18:45.10:0,45,481	1/1:5,11:16:26.99:234,27,0
chr10	95018934	.	CT	C	2319.39	PASS	AB=0.649;AC=31;AF=0.554;AN=56;BaseQRankSum=1.133;DP=538;FS=0.000;HRun=15;HaplotypeScore=69.1785;InbreedingCoeff=0.5388;MQ=73.13;MQ0=4;MQRankSum=1.401;QD=7.94;ReadPosRankSum=0.840;VQSLOD=2.7930;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:31:51.48:0,51,271	0/0:4,0:4:12:0,12,105	0/0:47,2:22:6.79:0,7,90	0/0:42,1:25:5.41:0,5,94	0/0:24,2:28:33.48:0,33,389	1/1:4,12:16:32.43:211,32,0	0/1:2,4:8:7.81:60,0,8	1/1:14,8:24:27.61:165,28,0	0/0:9,0:9:20.84:0,21,172	1/1:5,9:15:5.19:149,5,0	1/1:11,11:24:27.34:160,27,0	1/1:6,8:15:25.26:150,25,0	1/1:3,12:20:16.35:195,16,0	1/1:4,7:13:1.21:114,1,0	0/0:14,2:16:3.35:0,3,264	0/0:15,0:17:26.68:0,27,213	0/1:10,2:12:8.54:9,0,181	0/0:23,1:25:40.23:0,40,427	1/1:5,8:14:2.22:129,2,0	0/1:10,14:26:4.27:213,0,4	1/1:3,4:8:10.85:63,11,0	0/1:4,7:11:14.61:46,0,15	1/1:5,10:16:24.88:158,25,0	1/1:2,5:7:16.33:100,16,0	0/0:19,2:22:19.54:0,20,279	1/1:7,13:23:21.04:239,21,0	0/1:9,19:31:16.46:214,0,16	1/1:0,8:9:22.73:140,23,0
chr10	95020886	.	CT	C	7081.22	PASS	AB=0.926;AC=43;AF=0.768;AN=56;BaseQRankSum=8.258;DP=577;FS=2.951;HRun=11;HaplotypeScore=64.6625;InbreedingCoeff=0.8948;MQ=71.92;MQ0=0;MQRankSum=1.282;QD=16.62;ReadPosRankSum=4.503;VQSLOD=5.8008;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.18:0,78,823	1/1:1,10:11:29.97:246,30,0	0/0:28,0:18:28.98:0,29,242	0/1:23,2:14:51.29:51,0,52	1/1:3,16:19:38.93:320,39,0	1/1:1,20:21:47.94:394,48,0	1/1:2,18:21:49.97:400,50,0	0/0:30,0:29:63.16:0,63,671	1/1:3,9:12:26.96:222,27,0	1/1:3,18:21:47.89:391,48,0	1/1:3,19:22:41.74:345,42,0	1/1:8,17:25:23.18:389,23,0	1/1:3,14:18:34.76:276,35,0	1/1:3,20:23:50.93:419,51,0	1/1:6,19:25:26.83:370,27,0	1/1:2,16:18:44.94:369,45,0	0/0:35,0:35:81.42:0,81,873	0/0:18,0:18:42.02:0,42,432	1/1:6,8:14:23.95:197,24,0	1/1:5,22:28:61.56:482,62,0	1/1:2,9:10:23.97:197,24,0	1/1:2,15:17:44.95:369,45,0	1/1:6,16:22:38.93:320,39,0	1/1:2,10:12:26.97:222,27,0	1/1:2,10:12:26.97:222,27,0	1/1:6,22:29:67.93:543,68,0	1/1:4,16:20:15.96:337,16,0	0/0:10,0:10:24.02:0,24,239
chr10	95021721	.	AGT	A	5184.37	PASS	AB=0.786;AC=39;AF=0.750;AN=52;BaseQRankSum=9.874;DP=673;FS=11.433;HRun=0;HaplotypeScore=96.1131;InbreedingCoeff=0.0726;MQ=68.74;MQ0=7;MQRankSum=-0.499;QD=8.77;ReadPosRankSum=0.516;VQSLOD=3.8956;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,25:44:42.86:413,43,0	1/1:4,4:8:9.02:100,9,0	./.	./.	1/1:12,11:24:32.92:348,33,0	0/1:8,14:21:0.07:191,0,0	1/1:17,15:37:34.96:392,35,0	1/1:20,3:25:12.33:112,12,0	1/1:6,10:17:26.79:281,27,0	0/1:16,8:26:5.66:295,0,6	0/1:9,10:20:12.46:281,0,12	1/1:11,14:26:18.05:200,18,0	1/1:10,18:28:35.93:381,36,0	1/1:10,12:25:32.42:289,32,0	1/1:7,12:21:26.60:261,27,0	1/1:12,10:25:3.52:235,4,0	0/1:34,5:42:82.65:83,0,885	0/0:23,0:23:37.24:0,37,556	0/0:21,0:21:18.06:0,18,265	0/1:21,1:21:17.16:17,0,368	0/1:32,1:33:22.45:22,0,318	1/1:8,13:23:30.22:296,30,0	1/1:8,9:19:17.71:161,18,0	1/1:12,18:32:2.69:395,3,0	0/1:4,7:11:33.36:88,0,33	0/1:18,3:22:72.17:72,0,367	0/1:19,3:22:33.19:33,0,352	1/1:5,7:12:22.30:238,22,0
chr10	95022678	.	CG	C	636.42	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.910;DP=542;FS=0.000;HRun=3;HaplotypeScore=50.3153;InbreedingCoeff=0.9751;MQ=81.04;MQ0=0;MQRankSum=-2.433;QD=22.73;ReadPosRankSum=-0.864;VQSLOD=2.7718;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:66.12:0,66,840	0/0:5,0:5:15.05:0,15,216	0/0:13,0:13:38.34:0,38,524	0/0:15,0:15:45.15:0,45,611	0/0:26,0:26:72.20:0,72,964	0/0:17,0:17:51.15:0,51,699	0/0:25,0:25:66.22:0,66,947	1/1:1,22:23:51.12:604,51,0	0/0:9,0:9:27.08:0,27,370	0/0:17,0:17:51.14:0,51,686	0/0:24,0:24:66.13:0,66,823	0/0:15,0:15:45.14:0,45,630	0/0:22,0:22:54.17:0,54,757	0/0:18,0:18:54.17:0,54,759	0/0:18,0:18:51.16:0,51,714	0/0:16,0:16:48.13:0,48,653	0/0:33,0:33:96.32:0,96,1376	0/0:17,0:17:48.15:0,48,672	0/0:14,0:14:42.14:0,42,604	0/0:22,0:22:54.17:0,54,760	0/0:29,0:29:87.27:0,87,1212	0/0:13,0:13:36.10:0,36,482	0/0:16,0:16:39.08:0,39,490	0/0:29,0:29:87.25:0,87,1228	0/0:23,0:22:63.20:0,63,886	0/0:25,0:25:69.21:0,69,940	0/0:25,0:25:75.25:0,75,1074	1/1:0,5:5:12.04:149,12,0
chr10	95023114	.	T	TG	1720.54	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.349;DP=591;FS=0.602;HRun=0;HaplotypeScore=59.5455;InbreedingCoeff=0.9280;MQ=84.92;MQ0=0;MQRankSum=-2.180;QD=40.01;ReadPosRankSum=-3.939;VQSLOD=2.3950;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.28:0,90,1222	0/0:13,0:13:39.13:0,39,540	0/0:28,0:28:80.63:0,81,1051	0/0:10,0:11:4.11:0,4,390	0/0:32,0:32:93.27:0,93,1264	0/0:12,0:12:36.11:0,36,487	0/0:22,0:22:63.17:0,63,858	1/1:0,32:32:96.27:1458,96,0	0/0:18,0:18:54.10:0,54,712	0/0:30,0:30:87.29:0,87,1217	0/0:25,0:25:75.23:0,75,1003	0/0:22,0:22:66.22:0,66,915	0/0:18,0:18:48.16:0,48,671	0/0:26,0:26:78.25:0,78,1073	0/0:18,0:18:54.17:0,54,735	0/0:21,0:21:63.17:0,63,844	0/0:22,0:22:66.22:0,66,922	0/0:14,0:14:42.14:0,42,587	0/0:16,0:16:45.15:0,45,626	0/0:25,0:25:72.21:0,72,982	0/0:16,0:16:48.15:0,48,654	0/0:19,0:19:57.19:0,57,791	0/0:17,0:17:51.17:0,51,713	0/0:12,0:12:36.11:0,36,487	0/0:21,0:21:63.21:0,63,881	0/0:34,0:34:99:0,102,1409	0/0:26,0:26:78.25:0,78,1073	1/1:0,11:11:24.08:383,24,0
chr10	95024042	.	T	TACAA	2307.32	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.032;DP=427;FS=24.907;HRun=0;HaplotypeScore=64.9740;InbreedingCoeff=0.9398;MQ=67.11;MQ0=0;MQRankSum=-7.475;QD=62.36;ReadPosRankSum=-4.269;VQSLOD=1.6325;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.23:0,66,1175	0/0:5,0:5:15.05:0,15,276	0/0:14,0:13:30.10:0,30,549	0/0:7,0:7:15.05:0,15,268	0/0:19,0:19:48.15:0,48,834	0/0:12,0:12:33.11:0,33,606	0/0:15,0:15:42.13:0,42,722	1/1:5,25:31:84.29:2034,84,0	0/0:10,0:10:27.09:0,27,497	0/0:16,0:16:48.16:0,48,880	0/0:14,0:14:42.14:0,42,750	0/0:12,0:12:33.11:0,33,606	0/0:18,0:18:48.12:0,48,847	0/0:12,0:12:27.09:0,27,496	0/0:11,0:11:30.10:0,30,549	0/0:14,0:14:42.14:0,42,773	0/0:30,0:30:81.28:0,81,1472	0/0:22,0:22:63.20:0,63,1114	0/0:15,0:15:39.13:0,39,706	0/0:17,0:17:48.16:0,48,883	0/0:18,0:18:48.14:0,48,848	0/0:8,0:8:21.07:0,21,385	0/0:6,0:6:18.06:0,18,321	0/0:4,0:4:9.03:0,9,154	0/0:15,0:15:39.12:0,39,686	0/0:30,0:30:78.24:0,78,1338	0/0:23,0:22:66.21:0,66,1182	1/1:0,6:6:15.05:392,15,0
chr10	95025724	.	TATAG	T	1085.13	PASS	AB=0.997;AC=18;AF=0.346;AN=52;BaseQRankSum=-1.481;DP=481;FS=5.822;HRun=0;HaplotypeScore=103.5528;InbreedingCoeff=-0.0655;MQ=45.98;MQ0=46;MQRankSum=1.621;QD=3.89;ReadPosRankSum=-0.662;VQSLOD=1.6878;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:0.38:0,0,119	0/1:4,0:3:0.23:0,0,0	./.	./.	0/0:15,0:14:11.87:0,12,85	0/1:26,0:24:13.20:146,0,13	0/1:19,0:12:74.78:75,0,91	1/1:12,0:11:32.32:198,32,0	0/1:10,0:8:5.28:5,0,19	0/1:17,0:12:99:126,0,167	0/1:23,0:21:99:123,0,308	0/1:22,0:20:21.11:128,0,21	0/1:21,0:20:46.83:72,0,47	0/0:18,0:17:2.98:0,3,58	0/0:18,0:18:11.88:0,12,81	0/0:12,0:9:11.94:0,12,92	0/0:19,0:19:37.66:0,38,615	0/0:15,0:15:20.32:0,20,278	1/1:2,9:9:12.06:120,12,0	0/0:13,8:17:23.66:0,24,191	0/1:22,0:15:15.09:15,0,84	0/0:23,0:17:6.60:0,7,77	0/0:16,0:14:9.44:0,9,81	0/1:42,0:35:27.66:28,0,51	0/0:17,0:15:13.81:0,14,82	0/1:23,0:19:99:148,0,113	0/1:19,0:14:34.77:35,0,98	1/1:7,0:2:2.81:22,3,0
chr10	95025726	.	TAGAG	T	738.43	PASS	AB=0.945;AC=19;AF=0.452;AN=42;BaseQRankSum=-2.590;DP=484;FS=10.375;HRun=0;HaplotypeScore=106.0105;InbreedingCoeff=0.3222;MQ=46.16;MQ0=44;MQRankSum=1.473;QD=2.97;ReadPosRankSum=-1.132;VQSLOD=1.0864;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:14.26:0,14,152	0/0:2,0:3:0.24:0,0,1	./.	./.	./.	1/1:28,0:25:18.06:281,18,0	0/1:19,0:12:2.17:45,0,2	0/0:12,0:11:1.82:0,2,5	1/1:6,0:8:3:28,3,0	0/1:15,0:10:40.56:41,0,258	0/1:23,0:21:43.05:43,0,433	1/1:21,0:20:18.05:281,18,0	1/1:11,9:20:9.03:124,9,0	./.	1/1:13,0:18:0.31:1,0,0	./.	0/0:20,0:20:36.08:0,36,663	0/0:17,0:17:18.91:0,19,301	1/1:12,0:11:1.59:11,2,0	0/0:21,0:17:12.04:0,12,200	0/0:19,0:15:0.24:0,0,93	./.	0/1:10,0:14:0:0,0,0	1/1:30,12:35:0.47:1,0,0	./.	0/1:22,0:18:10.93:11,0,217	0/0:17,0:12:12.79:0,13,161	0/0:7,0:2:0.89:0,1,3
chr10	95025936	.	AAGGTATGAAGATAAAGGTT	A	1728.43	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.277;DP=562;FS=2.225;HRun=0;HaplotypeScore=274.5328;InbreedingCoeff=0.9352;MQ=94.79;MQ0=0;MQRankSum=-2.958;QD=61.73;ReadPosRankSum=-1.540;VQSLOD=2.9651;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.16:0,48,4313	0/0:5,0:5:15.05:0,15,1384	0/0:25,0:25:66.08:0,66,3495	0/0:28,0:28:75.15:0,75,3583	0/0:20,0:20:57.20:0,57,4828	0/0:27,0:27:78.22:0,78,5651	0/0:15,0:15:45.14:0,45,3514	1/1:11,12:23:36.11:1514,36,0	0/0:15,0:15:45.14:0,45,3581	0/0:25,0:25:75.26:0,75,6109	0/0:25,0:25:66.20:0,66,4776	0/0:24,0:24:69.24:0,69,5811	0/0:29,0:29:81.28:0,81,6779	0/0:17,0:17:48.15:0,48,4113	0/0:34,0:34:99:0,99,8633	0/0:13,0:13:33.11:0,33,2779	0/0:14,0:14:39.13:0,39,3395	0/0:17,0:17:48.16:0,48,3780	0/0:15,0:15:45.15:0,45,3311	0/0:20,0:20:60.17:0,60,4113	0/0:23,0:23:69.22:0,69,5470	0/0:20,0:20:57.20:0,57,4963	0/0:18,0:18:54.17:0,54,4278	0/0:18,0:18:54.16:0,54,4008	0/0:18,0:18:54.19:0,54,4830	0/0:28,0:28:84.28:0,84,6921	0/0:23,0:23:66.23:0,66,5682	1/1:2,3:5:6.02:326,6,0
chr10	95027278	.	AAC	A	1288.53	PASS	AB=0.896;AC=19;AF=0.339;AN=56;BaseQRankSum=6.733;DP=577;FS=4.035;HRun=0;HaplotypeScore=86.1903;InbreedingCoeff=0.3559;MQ=55.08;MQ0=21;MQRankSum=1.754;QD=6.22;ReadPosRankSum=1.606;VQSLOD=3.0777;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:40,4:44:82.96:83,0,924	1/1:3,5:6:11.99:124,12,0	0/0:39,0:8:15.01:0,15,182	0/0:46,0:4:6.49:0,6,88	1/1:4,12:17:23.85:278,24,0	0/0:20,1:20:1.29:0,1,476	0/0:24,1:25:13.37:0,13,649	0/0:15,0:25:24.72:0,25,179	1/1:5,8:13:26.65:269,27,0	0/0:17,0:17:30.10:0,30,459	0/1:8,1:9:13.76:14,0,257	0/1:16,3:19:40.81:41,0,322	0/1:12,1:13:7.73:8,0,338	0/0:20,0:20:46.04:0,46,684	1/1:1,6:7:8.99:90,9,0	1/1:1,11:12:24.07:279,24,0	0/0:39,3:45:27.59:0,28,1306	0/1:10,1:11:24.90:25,0,239	0/0:15,0:15:16.30:0,16,237	0/1:14,1:15:18.85:19,0,340	0/0:32,2:33:18.14:0,18,915	0/0:9,0:8:12.02:0,12,165	0/1:18,2:20:36.53:37,0,361	0/0:27,0:28:60.20:0,60,921	1/1:5,9:14:18.05:209,18,0	0/0:20,0:20:51.16:0,51,762	0/0:16,0:16:4.28:0,4,467	0/0:3,0:7:6:0,6,51
chr10	95027406	.	CT	C	2564.93	PASS	AB=0.938;AC=18;AF=0.321;AN=56;BaseQRankSum=7.775;DP=548;FS=6.175;HRun=11;HaplotypeScore=64.5534;InbreedingCoeff=0.8064;MQ=64.06;MQ0=4;MQRankSum=0.216;QD=14.17;ReadPosRankSum=1.451;VQSLOD=3.9653;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,1:36:52.72:0,53,772	0/0:5,0:5:12.02:0,12,120	0/1:12,1:9:10.66:11,0,97	0/0:12,0:9:21.97:0,22,177	0/0:28,0:29:74.04:0,74,745	1/1:2,16:18:41.92:345,42,0	1/1:2,17:18:41.95:345,42,0	0/0:31,0:32:13.13:0,13,185	0/0:11,0:10:27.07:0,27,288	0/0:12,0:13:30.08:0,30,319	0/0:27,1:29:44.23:0,44,644	1/1:2,12:14:35.93:292,36,0	1/1:5,13:18:38.94:320,39,0	1/1:4,12:16:29.96:246,30,0	0/0:9,0:10:23.89:0,24,238	0/0:12,1:13:8.52:0,9,283	0/0:21,1:22:35.53:0,36,576	0/0:18,0:18:42.07:0,42,437	0/0:26,1:28:16.44:0,16,532	0/0:23,0:24:51.18:0,51,552	0/0:15,2:16:11.45:0,11,327	1/1:1,14:15:32.95:270,33,0	1/1:3,22:25:56.85:467,57,0	1/1:4,20:23:47.92:394,48,0	0/0:24,0:24:67.05:0,67,702	0/0:22,0:22:57.12:0,57,594	0/0:20,1:21:7.93:0,8,494	0/1:16,0:15:27.23:83,0,27
chr10	95027417	.	TC	T	549.64	PASS	AB=0.947;AC=9;AF=0.161;AN=56;BaseQRankSum=10.249;DP=546;FS=8.329;HRun=1;HaplotypeScore=70.7846;InbreedingCoeff=-0.1777;MQ=60.85;MQ0=6;MQRankSum=-5.984;QD=3.11;ReadPosRankSum=0.709;VQSLOD=-0.5490;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:71.34:0,71,1004	0/0:4,0:4:11.99:0,12,119	0/0:10,0:7:7.37:0,7,83	0/0:11,0:8:22.48:0,22,138	0/0:25,0:25:72.08:0,72,825	0/0:22,0:22:8.45:0,8,132	0/1:20,1:20:28.42:31,0,28	0/1:25,3:26:49.27:221,0,49	0/0:12,0:11:32.91:0,33,354	0/0:18,0:18:50.96:0,51,519	0/0:28,0:28:62.40:0,62,753	0/1:13,1:14:13.58:43,0,14	0/1:14,0:14:2.79:3,0,19	0/1:14,0:14:32.83:38,0,33	0/0:12,0:12:32.95:0,33,336	0/0:11,0:11:17.66:0,18,312	0/0:24,0:24:65.92:0,66,752	0/0:18,0:18:47.41:0,47,525	0/0:26,0:26:70.73:0,71,725	0/0:25,0:25:45.32:0,45,722	0/0:15,0:14:33.09:0,33,404	0/1:18,0:18:17.65:18,0,26	0/1:25,0:25:29.28:42,0,29	0/1:24,0:23:20.34:20,0,29	0/0:24,0:24:71.83:0,72,769	0/0:24,0:24:64.26:0,64,694	0/0:22,0:22:42.39:0,42,630	0/1:12,7:16:43.45:270,0,43
chr10	95027879	.	C	CT	1702.71	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.706;DP=567;FS=4.494;HRun=2;HaplotypeScore=56.3184;InbreedingCoeff=0.9471;MQ=75.10;MQ0=0;MQRankSum=-3.059;QD=32.13;ReadPosRankSum=-2.712;VQSLOD=2.4561;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.20:0,63,780	0/0:11,0:11:33.09:0,33,397	0/0:10,0:10:27.08:0,27,329	0/0:13,0:13:30.07:0,30,347	0/0:32,0:32:87.27:0,87,1078	0/0:28,0:28:84.26:0,84,1041	0/0:12,0:12:33.10:0,33,409	1/1:6,31:37:99:1303,100,0	0/0:11,0:11:33.10:0,33,409	0/0:25,0:25:72.21:0,72,870	0/0:32,0:32:96.30:0,96,1189	0/0:16,0:16:48.13:0,48,582	0/0:20,0:20:60.17:0,60,727	0/0:18,0:18:51.14:0,51,618	0/0:18,0:18:51.16:0,51,632	0/0:16,0:16:45.14:0,45,558	0/0:12,0:12:30.07:0,30,357	0/0:19,0:19:54.17:0,54,662	0/0:17,0:17:45.13:0,45,547	0/0:29,0:29:87.22:0,87,1038	0/0:17,0:17:48.15:0,48,594	0/0:18,0:18:51.15:0,51,620	0/0:19,0:19:54.17:0,54,669	0/0:3,0:3:6.02:0,6,74	0/0:24,0:24:69.22:0,69,855	0/0:29,0:29:87.27:0,87,1079	0/0:42,0:41:99:0,123,1522	1/1:1,15:16:39.13:521,39,0
chr10	95029673	.	A	AG	784.54	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.890;DP=493;FS=7.843;HRun=0;HaplotypeScore=44.8163;InbreedingCoeff=0.9903;MQ=85.62;MQ0=0;MQRankSum=-2.060;QD=39.23;ReadPosRankSum=-1.060;VQSLOD=2.7938;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.28:0,87,1191	0/0:9,0:9:27.09:0,27,378	0/0:20,0:20:60.19:0,60,808	0/0:12,0:12:36.12:0,36,501	0/0:28,0:28:84.28:0,84,1172	0/0:19,0:19:57.17:0,57,777	0/0:14,0:14:42.12:0,42,569	1/1:0,14:14:42.14:663,42,0	0/0:10,0:10:30.10:0,30,420	0/0:25,0:25:75.25:0,75,1040	0/0:15,0:15:45.15:0,45,629	0/0:21,0:21:57.19:0,57,797	0/0:20,0:20:60.20:0,60,837	0/0:13,0:13:39.13:0,39,545	0/0:18,0:18:51.15:0,51,695	0/0:18,0:18:51.17:0,51,713	0/0:14,0:14:42.14:0,42,585	0/0:11,0:11:30.10:0,30,420	0/0:17,0:17:48.16:0,48,671	0/0:25,0:25:72.23:0,72,989	0/0:28,0:28:84.28:0,84,1175	0/0:26,0:26:78.25:0,78,1073	0/0:23,0:23:66.22:0,66,922	0/0:13,0:12:39.13:0,39,544	0/0:10,0:10:30.10:0,30,418	0/0:18,0:18:54.18:0,54,755	0/0:17,0:16:45.15:0,45,629	1/1:0,6:6:15.05:240,15,0
chr10	95031628	.	CT	C	2421.92	PASS	AB=0.606;AC=24;AF=0.429;AN=56;BaseQRankSum=1.471;DP=451;FS=4.630;HRun=13;HaplotypeScore=55.2709;InbreedingCoeff=0.8056;MQ=71.55;MQ0=6;MQRankSum=3.220;QD=13.38;ReadPosRankSum=1.790;VQSLOD=4.1637;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:23:59.11:0,59,519	1/1:1,7:8:22.44:157,22,0	0/0:43,0:21:22.38:0,22,203	0/0:43,0:16:11.10:0,11,103	1/1:7,8:15:23.78:175,24,0	0/0:14,0:14:36.06:0,36,350	0/0:10,0:10:21.03:0,21,204	0/0:11,0:27:45.67:0,46,243	1/1:5,11:15:15.99:202,16,0	1/1:3,13:16:35.70:257,36,0	0/1:6,15:21:7.68:277,0,8	0/0:9,0:9:24.03:0,24,229	0/0:5,0:5:4.79:0,5,106	0/0:9,0:9:15.02:0,15,145	1/1:3,7:10:14.89:109,15,0	1/1:2,7:9:17.89:131,18,0	0/0:26,0:29:71.59:0,72,642	0/0:12,0:12:27.50:0,27,257	1/1:6,17:22:47.67:347,48,0	1/1:1,6:7:17.89:131,18,0	1/1:0,3:3:5.97:44,6,0	0/0:5,0:5:7.83:0,8,63	0/0:9,0:10:26.87:0,27,242	0/0:19,0:19:32.97:0,33,309	0/1:7,9:17:23.45:168,0,23	1/1:3,14:17:40.98:289,41,0	1/1:1,18:19:47.62:350,48,0	0/0:3,0:11:19.89:0,20,100
chr10	95032289	.	AT	A	1280.51	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.365;DP=577;FS=8.331;HRun=4;HaplotypeScore=63.6076;InbreedingCoeff=0.9549;MQ=74.85;MQ0=1;MQRankSum=-1.632;QD=30.49;ReadPosRankSum=-3.342;VQSLOD=2.0973;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.18:0,54,755	0/0:3,0:3:9.03:0,9,126	0/0:16,0:11:19.89:0,20,249	0/0:22,0:20:12.82:0,13,483	0/0:42,0:42:99:0,117,1601	0/0:27,0:27:75.25:0,75,1040	0/0:16,0:16:36.12:0,36,500	1/1:3,30:33:90.27:1078,90,0	0/0:13,0:13:39.12:0,39,526	0/0:32,0:32:96.30:0,96,1308	0/0:30,0:30:90.28:0,90,1219	0/0:18,0:18:48.15:0,48,653	0/0:20,0:20:60.20:0,60,836	0/0:21,0:21:63.15:0,63,827	0/0:14,0:14:39.12:0,39,529	0/0:19,0:19:57.18:0,57,774	0/0:34,0:34:96.29:0,96,1324	0/0:21,0:21:63.18:0,63,860	0/0:23,0:23:66.22:0,66,923	0/0:23,0:23:63.20:0,63,863	0/0:13,0:13:39.13:0,39,539	0/0:15,0:15:45.14:0,45,607	0/0:21,0:21:63.21:0,63,878	0/0:13,0:13:39.13:0,39,543	0/0:11,0:11:33.11:0,33,459	0/0:22,0:22:60.19:0,60,825	0/0:26,0:26:78.25:0,78,1074	1/1:0,9:9:27.08:324,27,0
chr10	95033990	.	TTTATTATTATTA	T	2731.86	PASS	AB=1.000;AC=21;AF=0.404;AN=52;BaseQRankSum=3.524;DP=377;FS=3.449;HRun=0;HaplotypeScore=137.4696;InbreedingCoeff=0.6571;MQ=66.99;MQ0=3;MQRankSum=0.524;QD=16.07;ReadPosRankSum=0.950;VQSLOD=2.0081;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:39.12:0,39,1152	0/1:7,0:7:13.97:48,0,14	0/0:13,0:13:6.01:0,6,109	./.	0/0:15,0:15:11.94:0,12,121	0/0:14,0:14:24.08:0,24,739	0/0:9,0:9:12.02:0,12,315	0/0:37,0:37:70.78:0,71,1901	1/1:9,0:9:3.01:54,3,0	1/1:23,0:23:25.98:721,26,0	1/1:22,0:22:3.01:69,3,0	0/0:6,0:6:3.01:0,3,55	0/0:10,0:10:18.06:0,18,581	0/0:12,0:11:21.05:0,21,647	0/0:10,0:10:4.98:0,5,25	1/1:10,0:10:3.01:44,3,0	0/0:20,0:19:33.11:0,33,1199	0/0:11,0:11:27.09:0,27,727	1/1:17,0:17:18.06:434,18,0	1/1:23,0:22:3.01:86,3,0	1/1:4,0:4:1.79:48,2,0	./.	0/0:13,0:13:6.02:0,6,188	0/0:5,0:5:8.24:0,8,182	1/1:12,0:12:6.02:106,6,0	1/1:3,16:19:36.11:926,36,0	1/1:24,0:24:11.71:376,12,0	0/0:9,0:9:18.06:0,18,521
chr10	95034013	.	TATTATTATTATTATCATCATCATCATC	T	4148.88	PASS	AB=0.854;AC=17;AF=0.327;AN=52;BaseQRankSum=4.279;DP=318;FS=2.179;HRun=0;HaplotypeScore=177.1036;InbreedingCoeff=0.5564;MQ=50.16;MQ0=9;MQRankSum=3.314;QD=26.94;ReadPosRankSum=0.591;VQSLOD=2.6338;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:15:42.13:0,42,1618	0/1:7,0:7:3.64:4,0,14	0/0:3,0:3:6.01:0,6,109	./.	0/0:13,0:13:14.95:0,15,171	0/0:9,0:9:24.08:0,24,818	0/0:4,0:4:12.02:0,12,315	0/0:36,0:36:88.75:0,89,2148	1/1:9,0:8:2.50:9,2,0	0/1:6,21:25:92.19:970,0,92	1/1:1,19:20:11.95:242,12,0	0/0:3,0:3:3.01:0,3,55	0/0:7,0:7:19.88:0,20,638	0/0:8,0:7:21.05:0,21,798	0/0:5,0:5:8.96:0,9,96	0/0:12,0:12:0.89:0,1,2	0/0:17,0:14:36.12:0,36,1925	0/0:12,0:11:30.10:0,30,937	1/1:13,0:13:27.09:742,27,0	1/1:4,15:18:1.33:292,1,0	0/1:5,0:5:5.87:42,0,6	./.	0/0:8,0:8:6.02:0,6,188	0/0:3,0:3:8.24:0,8,250	1/1:17,0:16:2.38:54,2,0	1/1:17,0:16:36.11:926,36,0	1/1:0,20:20:11.70:868,12,0	0/0:6,0:6:18.06:0,18,521
chr10	95034019	.	TATTATTATCATCATCATC	T	3156.57	PASS	AB=1.000;AC=26;AF=0.520;AN=50;BaseQRankSum=6.523;DP=316;FS=7.940;HRun=0;HaplotypeScore=137.3358;InbreedingCoeff=0.4320;MQ=49.90;MQ0=10;MQRankSum=0.941;QD=14.48;ReadPosRankSum=1.565;VQSLOD=2.0596;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:15:13.63:14,0,754	1/1:1,6:7:3.01:155,3,0	0/0:2,0:2:5.91:0,6,38	./.	1/1:2,11:13:4.28:70,4,0	0/1:10,0:10:99:114,0,382	0/0:3,0:3:9.02:0,9,131	0/0:33,0:32:66.14:0,66,903	1/1:1,10:10:3.01:155,3,0	0/1:27,0:25:53.71:452,0,54	1/1:19,0:19:5.93:93,6,0	./.	0/1:7,0:7:50.63:51,0,258	0/0:7,0:6:18.06:0,18,357	1/1:4,0:4:9.03:178,9,0	1/1:0,15:15:3.01:144,3,0	0/0:17,0:14:39.12:0,39,1091	0/0:11,0:10:30:0,30,383	1/1:15,0:15:27.08:490,27,0	1/1:18,0:17:4.74:186,5,0	0/0:5,0:5:1.92:0,2,5	./.	0/0:8,0:8:6.02:0,6,94	0/0:3,0:3:6.90:0,7,113	1/1:2,15:16:6.02:265,6,0	1/1:18,0:17:29.89:462,30,0	1/1:20,0:20:11.85:500,12,0	0/0:6,0:6:18.06:0,18,261
chr10	95034025	.	TATCATCATCATCATCATC	T	2655.17	PASS	AB=1.000;AC=29;AF=0.690;AN=42;BaseQRankSum=3.568;DP=323;FS=1.072;HRun=0;HaplotypeScore=144.3051;InbreedingCoeff=0.3130;MQ=49.64;MQ0=11;MQRankSum=-0.552;QD=11.96;ReadPosRankSum=-1.905;VQSLOD=1.9614;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:16:5.33:0,5,458	1/1:7,0:7:3.01:117,3,0	./.	./.	0/1:13,0:13:10.07:13,0,10	0/1:11,0:11:30.27:324,0,30	./.	./.	1/1:11,0:10:3.01:119,3,0	0/1:27,0:25:99:189,0,149	1/1:19,0:19:8.43:91,8,0	./.	1/1:8,0:8:6.02:230,6,0	0/0:7,0:6:3.01:0,3,47	1/1:4,0:4:2.80:44,3,0	1/1:15,0:15:3.01:108,3,0	0/0:16,0:13:18.06:0,18,794	0/0:11,0:10:9.46:0,9,200	1/1:10,0:15:15.74:334,16,0	1/1:18,0:17:6.02:180,6,0	./.	1/1:0,7:7:11.91:100,12,0	1/1:3,7:10:2.96:20,3,0	0/0:4,0:3:2.99:0,3,23	1/1:17,0:16:6.02:194,6,0	1/1:20,0:19:8.95:264,9,0	1/1:20,0:20:12.04:469,12,0	./.
chr10	95034505	.	A	AT	1490.45	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.328;DP=756;FS=20.785;HRun=4;HaplotypeScore=91.1068;InbreedingCoeff=0.9911;MQ=87.71;MQ0=0;MQRankSum=-3.101;QD=33.87;ReadPosRankSum=-3.953;VQSLOD=0.9851;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.27:0,96,1088	0/0:11,0:11:30.09:0,30,340	0/0:28,0:28:78.07:0,78,828	0/0:25,0:25:63.16:0,63,702	0/0:27,0:27:72.20:0,72,812	0/0:28,0:28:72.20:0,72,816	0/0:34,0:34:96.26:0,96,1079	1/1:4,35:39:99:1404,105,0	0/0:30,0:30:75.21:0,75,850	0/0:29,0:29:72.20:0,72,816	0/0:17,0:17:51.13:0,51,569	0/0:38,0:38:99:0,111,1258	0/0:27,0:27:78.22:0,78,885	0/0:22,0:22:66.17:0,66,737	0/0:31,0:31:93.27:0,93,1054	0/0:39,0:39:99:0,102,1157	0/0:41,0:41:99:0,114,1268	0/0:11,0:11:30.05:0,30,327	0/0:32,0:32:72.17:0,72,791	0/0:22,0:22:50.45:0,50,576	0/0:43,0:43:99:0,123,1395	0/0:21,0:21:51.13:0,51,567	0/0:13,0:12:33.09:0,33,370	0/0:25,0:25:66.19:0,66,748	0/0:26,0:26:75.21:0,75,851	0/0:25,0:25:63.18:0,63,715	0/0:31,0:30:87.25:0,87,986	1/1:0,5:5:15.05:205,15,0
chr10	95034850	.	A	AC	1596.88	PASS	AB=0.763;AC=31;AF=0.554;AN=56;BaseQRankSum=-5.423;DP=466;FS=5.003;HRun=10;HaplotypeScore=59.4822;InbreedingCoeff=-0.2219;MQ=79.82;MQ0=2;MQRankSum=-0.317;QD=4.34;ReadPosRankSum=-0.938;VQSLOD=0.2769;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:29:47.67:0,48,353	1/1:5,0:5:3:32,3,0	0/0:33,1:25:7.59:0,8,243	0/1:18,0:14:2.62:3,0,70	0/1:18,7:25:34.54:81,0,35	0/1:8,9:17:0.77:142,0,1	0/1:8,16:24:29.92:223,0,30	1/1:16,8:24:15.39:127,15,0	1/1:8,8:16:5.18:90,5,0	0/1:6,0:6:7.69:26,0,8	0/1:12,0:12:15.64:46,0,16	0/1:9,10:19:9.92:77,0,10	0/1:13,5:18:45.46:45,0,73	0/1:10,6:16:22.92:23,0,40	0/1:6,14:20:9.71:100,0,10	0/1:8,13:21:25.12:110,0,25	0/0:15,0:19:30.62:0,31,208	0/0:16,0:16:29.18:0,29,239	1/1:9,1:11:1.96:38,2,0	1/1:6,6:12:14.97:145,15,0	0/1:9,8:17:15.63:42,0,16	0/1:11,6:17:24.46:37,0,24	0/1:7,3:9:13.60:51,0,14	0/1:17,4:21:0.61:182,0,1	0/1:8,1:9:18.63:26,0,19	1/1:12,2:14:3.01:32,3,0	0/1:3,4:7:23.01:23,0,37	1/1:2,4:7:6:55,6,0
chr10	95035201	.	GA	G	758.91	PASS	AB=0.836;AC=21;AF=0.375;AN=56;BaseQRankSum=-1.019;DP=594;FS=6.019;HRun=17;HaplotypeScore=58.5883;InbreedingCoeff=0.0968;MQ=55.42;MQ0=45;MQRankSum=0.337;QD=2.99;ReadPosRankSum=1.289;VQSLOD=-0.7110;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:32.75:0,33,296	1/1:0,6:7:7.84:39,8,0	0/0:83,0:12:14.88:0,15,108	0/0:82,1:6:4.27:0,4,48	0/1:26,2:29:40.57:47,0,41	0/0:12,0:13:22.24:0,22,139	0/1:12,1:12:7.75:8,0,122	0/0:2,0:7:8.85:0,9,40	1/1:6,3:10:15.62:78,16,0	0/1:8,6:14:3.61:80,0,4	0/1:9,4:14:8.41:54,0,8	0/0:18,0:17:18.66:0,19,127	0/0:16,1:18:6.17:0,6,149	0/0:14,0:13:11.57:0,12,87	1/1:10,5:14:20.16:116,20,0	1/1:10,6:16:2.93:110,3,0	0/0:28,4:31:20.16:0,20,332	0/1:13,2:15:20.99:21,0,101	0/1:17,5:21:29.35:92,0,29	0/1:8,6:15:10.50:42,0,11	1/1:3,2:5:8.71:50,9,0	0/0:13,0:13:2.93:0,3,74	0/0:15,0:17:35.30:0,35,257	0/1:18,0:16:9.10:9,0,103	0/1:14,2:17:29.16:66,0,29	0/1:19,2:20:28.37:47,0,28	0/1:14,6:21:43.51:74,0,44	0/0:4,0:8:8.67:0,9,52
chr10	95035285	.	G	GTGT	4794.93	PASS	AB=0.671;AC=21;AF=0.375;AN=56;BaseQRankSum=14.010;DP=559;FS=3.004;HRun=0;HaplotypeScore=119.3317;InbreedingCoeff=0.3274;MQ=60.88;MQ0=4;MQRankSum=-1.119;QD=16.31;ReadPosRankSum=4.836;VQSLOD=4.5901;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:16.53:0,17,982	1/1:0,1:8:14.69:146,15,0	0/0:27,0:16:45.57:0,46,682	0/0:22,0:20:50.83:0,51,798	1/1:6,0:31:9.06:584,9,0	0/0:24,0:26:75.25:0,75,1358	0/0:16,0:17:51.15:0,51,816	0/1:22,0:19:99:125,0,454	1/1:1,0:16:18.14:348,18,0	0/1:2,0:23:13.41:487,0,13	0/1:7,0:16:50.74:229,0,51	0/0:16,0:16:44.90:0,45,822	0/0:21,0:21:60.16:0,60,1059	0/0:13,0:13:39.11:0,39,619	1/1:2,0:13:26.04:282,26,0	0/1:4,0:15:81.18:311,0,81	0/0:19,0:20:40.09:0,40,808	0/0:20,0:20:46.88:0,47,819	0/1:7,0:14:85.61:86,0,246	1/1:0,1:17:25.12:414,25,0	1/1:4,3:41:40.32:732,40,0	0/0:11,0:11:33.11:0,33,598	0/0:20,0:22:56:0,56,1061	0/0:23,0:23:57.15:0,57,925	0/1:3,0:17:35.30:313,0,35	0/1:8,0:29:99:401,0,215	0/1:2,0:22:4.03:285,0,4	0/1:5,0:5:52.27:52,0,86
chr10	95035300	.	G	GTA	545.67	PASS	AB=0.960;AC=15;AF=0.268;AN=56;BaseQRankSum=12.221;DP=599;FS=12.085;HRun=0;HaplotypeScore=117.1226;InbreedingCoeff=-0.0320;MQ=62.32;MQ0=4;MQRankSum=-2.761;QD=1.91;ReadPosRankSum=5.666;VQSLOD=0.8974;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:54.09:0,54,763	1/1:8,0:8:3.05:9,3,0	0/0:32,0:21:59.16:0,59,640	0/0:23,0:21:44.21:0,44,658	0/1:32,0:32:20.19:20,0,61	0/0:28,0:28:78.14:0,78,1112	0/0:15,0:15:42.02:0,42,547	0/1:28,0:25:68.80:305,0,69	1/1:18,0:17:13.70:57,14,0	0/1:25,0:23:37.12:37,0,57	0/0:19,0:19:2.72:0,3,105	0/0:16,0:16:45.14:0,45,660	0/0:22,0:22:54.18:0,54,813	0/0:13,0:13:27.07:0,27,389	0/1:14,0:14:8.34:42,0,8	0/1:15,0:15:22.40:22,0,51	0/0:21,0:21:48.06:0,48,680	0/0:19,0:19:39.57:0,40,553	0/0:17,0:15:18.44:0,18,183	0/1:21,0:21:28.66:29,0,48	0/1:49,0:48:22.25:22,0,123	0/0:13,0:13:39.08:0,39,525	0/0:22,0:22:41.84:0,42,852	0/0:23,0:23:38:0,38,714	0/1:15,0:15:11.29:34,0,11	0/1:27,0:27:11.57:12,0,114	0/1:24,0:24:9.82:10,0,73	0/1:2,7:10:13.99:106,0,14
chr10	95035459	.	TTATA	T	17887.91	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=6.161;DP=453;FS=6.797;HRun=0;HaplotypeScore=81.0096;InbreedingCoeff=0.9569;MQ=62.46;MQ0=7;MQRankSum=-4.266;QD=43.00;ReadPosRankSum=1.754;VQSLOD=5.1267;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:26:54.19:996,54,0	1/1:0,8:8:24.08:439,24,0	0/0:7,0:7:18.06:0,18,393	0/0:5,0:5:12.04:0,12,282	1/1:1,28:29:66.23:1232,66,0	1/1:0,18:18:42.14:784,42,0	1/1:0,11:11:21.07:380,21,0	1/1:5,34:39:93.28:1643,93,0	1/1:2,12:13:33.11:616,33,0	1/1:2,21:23:63.19:1131,63,0	1/1:1,10:10:24.08:448,24,0	1/1:0,14:14:36.12:672,36,0	1/1:2,19:20:47.99:882,48,0	1/1:0,19:19:45.15:839,45,0	1/1:1,14:15:42.12:751,42,0	1/1:1,15:16:36.12:660,36,0	0/0:13,0:13:39.11:0,39,943	0/0:12,0:12:33.11:0,33,880	1/1:1,20:21:60.19:1012,60,0	1/1:1,16:17:39.09:692,39,0	1/1:0,5:5:9.03:168,9,0	1/1:2,7:8:15.01:244,15,0	1/1:1,11:11:24.08:436,24,0	1/1:1,8:9:12.04:224,12,0	1/1:0,13:13:36.12:672,36,0	1/1:2,22:23:66.22:1190,66,0	1/1:2,28:29:72.25:1344,72,0	1/1:1,10:11:24.08:436,24,0
chr10	95036095	.	T	TTA	804.61	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.150;DP=597;FS=3.365;HRun=0;HaplotypeScore=111.3112;InbreedingCoeff=0.8677;MQ=60.15;MQ0=26;MQRankSum=0.049;QD=14.12;ReadPosRankSum=-1.663;VQSLOD=3.3448;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:84.14:0,84,1012	0/0:6,0:6:15.03:0,15,166	0/0:26,0:10:8.81:0,9,120	0/0:19,0:8:8.71:0,9,92	0/0:42,0:41:85.56:0,86,876	0/0:28,0:27:60.08:0,60,608	0/0:16,0:15:36.04:0,36,373	1/1:26,20:46:82.81:837,83,0	0/0:12,0:12:17.96:0,18,174	0/0:16,0:16:42.09:0,42,441	0/0:21,0:20:45:0,45,438	0/0:17,0:17:33.06:0,33,337	0/0:13,0:12:30.55:0,31,341	0/0:9,0:8:21.05:0,21,230	0/0:25,0:25:49.37:0,49,565	0/0:25,0:24:36.09:0,36,461	0/0:40,0:33:71.70:0,72,767	0/0:20,0:20:40.29:0,40,417	0/0:19,0:18:35.19:0,35,327	0/0:23,0:22:45.08:0,45,452	0/0:11,0:11:29.94:0,30,288	0/0:24,0:24:68.88:0,69,673	0/0:14,0:13:29.67:0,30,307	0/0:13,0:11:29.10:0,29,295	0/0:22,0:21:54.88:0,55,623	0/0:15,0:15:42.08:0,42,432	0/0:17,0:17:26:0,26,245	1/1:4,6:7:5.90:79,6,0
chr10	95036096	.	T	TA	521.25	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=-2.142;DP=614;FS=1.474;HRun=0;HaplotypeScore=110.4032;InbreedingCoeff=0.5193;MQ=58.99;MQ0=32;MQRankSum=-0.873;QD=6.36;ReadPosRankSum=-0.772;VQSLOD=3.2404;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:99:0,107,1034	0/0:7,0:7:15.02:0,15,149	0/1:26,0:10:1.88:2,0,86	0/0:19,0:8:9.39:0,9,91	0/0:44,0:43:99:0,106,962	0/0:31,0:30:60.01:0,60,534	0/0:16,0:14:35.97:0,36,310	1/1:37,8:44:37.36:596,37,0	0/0:13,0:13:17.98:0,18,167	0/0:17,0:17:42.05:0,42,396	0/0:20,0:19:44.96:0,45,401	0/0:18,0:18:33.01:0,33,293	0/0:14,0:12:30.92:0,31,286	0/0:10,0:8:21.01:0,21,195	0/0:24,0:24:46.11:0,46,488	0/0:25,0:24:44.73:0,45,482	0/0:41,0:33:74.17:0,74,736	0/0:19,0:19:50.69:0,51,455	0/0:20,0:18:38.76:0,39,324	0/0:24,0:23:45.04:0,45,415	0/0:11,0:11:29.92:0,30,264	0/0:24,0:24:68.76:0,69,583	0/0:14,0:13:29.82:0,30,281	0/0:17,0:14:29.05:0,29,250	0/0:24,0:23:55.86:0,56,588	0/0:14,0:14:42.04:0,42,392	0/0:19,0:19:26.75:0,27,242	0/1:11,0:8:12.21:30,0,12
chr10	95036893	.	T	TC	7618	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-15.196;DP=776;FS=9.227;HRun=2;HaplotypeScore=73.7944;InbreedingCoeff=0.9998;MQ=84.07;MQ0=0;MQRankSum=-2.705;QD=38.47;ReadPosRankSum=3.708;VQSLOD=5.1649;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,1566	0/0:18,0:18:54.17:0,54,668	0/0:29,0:29:79.66:0,80,931	0/0:22,0:22:41.31:0,41,601	0/0:26,0:26:68.98:0,69,804	1/1:1,27:28:72.24:1036,72,0	1/1:1,17:18:45.15:648,45,0	0/0:43,0:43:99:0,117,1420	0/0:31,0:31:87.24:0,87,1051	0/0:26,0:26:78.23:0,78,941	0/0:20,0:20:60.19:0,60,741	1/1:0,21:21:60.20:864,60,0	1/1:1,30:31:87.29:1245,87,0	1/1:1,28:29:81.27:1166,81,0	0/0:38,0:38:99:0,108,1327	0/0:25,0:25:75.24:0,75,929	0/0:36,0:36:93.25:0,93,1208	0/0:20,0:20:48.15:0,48,593	0/0:27,0:27:78.13:0,78,906	0/0:46,0:46:99:0,135,1671	0/0:39,0:39:99:0,114,1362	1/1:0,24:24:63.21:906,63,0	1/1:1,24:25:63.12:890,63,0	1/1:0,22:22:60.20:863,60,0	0/0:20,0:20:60.16:0,60,718	0/0:30,0:30:87.26:0,87,1063	0/0:27,0:27:78.24:0,78,966	0/0:9,0:9:27.08:0,27,334
chr10	95037289	.	A	AAAAT	2471.23	PASS	AC=24;AF=0.500;AN=48;BaseQRankSum=-6.616;DP=291;FS=3.702;HRun=0;HaplotypeScore=46.0276;InbreedingCoeff=0.7176;MQ=65.31;MQ0=2;MQRankSum=1.480;QD=23.54;ReadPosRankSum=0.757;VQSLOD=2.8259;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:15:30.09:0,30,454	1/1:3,2:5:6.02:143,6,0	0/0:8,0:7:3.01:0,3,41	./.	1/1:4,4:8:12.04:236,12,0	1/1:4,11:16:30.10:702,30,0	1/1:5,0:5:3.01:72,3,0	0/0:25,0:33:15.74:0,16,99	1/1:6,0:6:3.01:62,3,0	0/0:6,0:6:6.02:0,6,95	0/0:9,0:9:9.03:0,9,143	1/1:5,1:6:3.01:72,3,0	1/1:3,3:6:9.03:215,9,0	1/1:7,7:14:12.04:287,12,0	1/1:5,4:9:6.02:143,6,0	1/1:8,7:15:18.06:430,18,0	0/0:17,0:17:39.03:0,39,541	0/0:19,0:19:42.14:0,42,663	0/0:13,0:12:5.99:0,6,95	0/0:11,0:11:15.04:0,15,218	./.	./.	./.	1/1:3,0:3:3.01:72,3,0	1/1:9,3:12:9.03:215,9,0	0/0:16,0:16:33.11:0,33,504	0/0:11,0:11:12.03:0,12,168	0/0:7,0:8:3:0,3,28
chr10	95038607	.	GGTGT	G	470.91	PASS	AB=0.951;AC=28;AF=0.560;AN=50;BaseQRankSum=0.264;DP=530;FS=4.047;HRun=0;HaplotypeScore=97.6110;InbreedingCoeff=0.2042;MQ=69.76;MQ0=16;MQRankSum=2.312;QD=1.71;ReadPosRankSum=0.537;VQSLOD=1.8245;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:18.04:0,18,304	0/0:3,0:3:5.60:0,6,28	./.	./.	0/0:18,0:18:5.13:0,5,27	0/1:21,4:25:7.66:40,0,8	0/1:15,0:14:0:0,0,0	./.	0/1:15,0:14:19.11:19,0,47	0/0:19,0:18:6.33:0,6,38	1/1:13,0:11:5.44:32,5,0	1/1:16,3:21:9.02:101,9,0	1/1:14,1:14:3.01:46,3,0	1/1:16,2:18:3.01:46,3,0	1/1:15,0:15:2.98:22,3,0	0/1:13,1:16:13.92:41,0,14	0/0:18,0:17:11.66:0,12,74	0/1:11,0:10:29.88:30,0,40	0/0:25,0:24:0.47:0,0,1	1/1:20,0:20:7.26:86,7,0	0/0:27,0:26:1.25:0,1,3	1/1:9,3:12:3.01:46,3,0	1/1:8,0:8:3.01:37,3,0	1/1:17,10:25:3.01:46,3,0	0/0:19,0:21:5.75:0,6,82	1/1:23,0:23:0.49:3,0,0	0/1:18,0:18:17.51:18,0,20	1/1:4,0:4:0.47:1,0,0
chr10	95040523	.	GT	G	1114.10	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.969;DP=648;FS=1.947;HRun=7;HaplotypeScore=63.2914;InbreedingCoeff=0.9986;MQ=77.94;MQ0=0;MQRankSum=-0.596;QD=22.28;ReadPosRankSum=-2.256;VQSLOD=2.6113;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.14:0,48,585	0/0:9,0:9:24.08:0,24,301	0/0:19,0:18:54.11:0,54,611	0/0:19,0:19:35.39:0,35,467	0/0:38,0:38:99:0,102,1283	0/0:30,0:30:90.27:0,90,1108	0/0:11,0:11:33.11:0,33,415	1/1:6,30:36:63.46:838,63,0	0/0:15,0:15:45.14:0,45,566	0/0:36,0:35:96.27:0,96,1173	0/0:18,0:18:51.16:0,51,641	0/0:28,0:28:77.91:0,78,940	0/0:19,0:19:51.13:0,51,614	0/0:39,0:39:99:0,111,1372	0/0:17,0:17:51.16:0,51,641	0/0:27,0:27:75.20:0,75,914	0/0:24,0:24:69.20:0,69,854	0/0:17,0:17:48.15:0,48,591	0/0:18,0:18:48.15:0,48,595	0/0:30,0:30:84.26:0,84,1045	0/0:16,0:16:39.12:0,39,490	0/0:31,0:31:84.26:0,84,1043	0/0:18,0:18:45.14:0,45,566	0/0:20,0:20:54.17:0,54,678	0/0:23,0:23:63.20:0,63,782	0/0:23,0:23:69.20:0,69,843	0/0:36,0:36:99:0,102,1255	1/1:0,14:14:39.09:398,39,0
chr10	95041568	.	CT	C	663.18	PASS	AB=0.941;AC=5;AF=0.089;AN=56;BaseQRankSum=7.119;DP=673;FS=0.659;HRun=9;HaplotypeScore=63.6618;InbreedingCoeff=0.6660;MQ=73.87;MQ0=0;MQRankSum=-0.110;QD=11.84;ReadPosRankSum=-2.645;VQSLOD=2.4269;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:54.15:0,54,614	0/0:11,0:11:33.10:0,33,381	0/1:15,1:16:5.51:6,0,266	0/0:7,0:7:15.03:0,15,153	0/0:32,0:33:81.53:0,82,903	0/0:23,0:23:60.18:0,60,693	0/0:23,0:23:54.16:0,54,623	1/1:6,22:28:66.02:599,66,0	0/0:14,1:15:11.62:0,12,374	0/0:49,0:49:99:0,141,1624	0/0:27,0:27:75.22:0,75,863	0/0:33,0:33:81.23:0,81,924	0/0:25,0:25:60.15:0,60,672	0/0:26,1:27:44.75:0,45,769	0/0:32,0:32:96.29:0,96,1108	0/0:28,0:28:75.16:0,75,832	0/0:20,0:21:60.01:0,60,672	0/0:17,0:17:48.14:0,48,553	0/0:21,0:21:54.16:0,54,623	0/0:27,0:28:65.25:0,65,790	0/0:21,0:21:57.17:0,57,658	0/0:23,0:23:54.15:0,54,615	0/0:22,0:22:63.19:0,63,727	0/0:17,0:17:48.14:0,48,554	0/0:28,0:28:69.20:0,69,796	0/0:31,0:31:81.24:0,81,935	0/0:33,0:33:90.06:0,90,1017	1/1:5,7:12:0.39:169,0,0
chr10	95045175	.	G	GGTTT	1021.70	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.902;DP=637;FS=1.872;HRun=0;HaplotypeScore=105.3562;InbreedingCoeff=0.9812;MQ=69.02;MQ0=10;MQRankSum=-1.282;QD=26.20;ReadPosRankSum=-3.856;VQSLOD=3.0014;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:68.62:0,69,999	0/0:8,0:8:18.06:0,18,294	0/0:59,0:37:20.91:0,21,415	0/0:45,0:21:20.73:0,21,341	0/0:22,0:22:51.17:0,51,832	0/0:26,0:26:57.15:0,57,897	0/0:19,0:19:51.17:0,51,828	1/1:21,9:31:37.32:704,37,0	0/0:18,0:18:42.13:0,42,657	0/0:27,0:27:51.17:0,51,810	0/0:24,0:24:57.11:0,57,830	0/0:18,0:18:48.16:0,48,780	0/0:18,0:18:36.10:0,36,540	0/0:12,0:12:24.07:0,24,369	0/0:21,0:21:49.05:0,49,785	0/0:17,0:17:42.14:0,42,680	0/0:19,0:21:33.19:0,33,685	0/0:15,0:15:20.72:0,21,313	0/0:13,0:13:21.07:0,21,343	0/0:20,0:20:48.15:0,48,759	0/0:11,0:11:27.06:0,27,391	0/0:16,0:16:36.12:0,36,584	0/0:25,0:25:60.20:0,60,955	0/0:18,0:20:45.15:0,45,713	0/0:31,0:31:72.25:0,72,1172	0/0:25,0:25:66.22:0,66,1054	0/0:32,0:32:69.22:0,69,1077	1/1:3,5:8:18.06:437,18,0
chr10	95049079	.	AC	A	1553.36	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.239;DP=494;FS=12.658;HRun=2;HaplotypeScore=45.3227;InbreedingCoeff=0.9835;MQ=72.79;MQ0=0;MQRankSum=-0.898;QD=36.12;ReadPosRankSum=-1.155;VQSLOD=2.3423;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.33:0,96,1436	0/0:7,0:7:21.07:0,21,315	0/0:9,0:9:24.05:0,24,321	0/0:8,0:8:18.06:0,18,269	0/0:15,0:15:45.15:0,45,674	0/0:20,0:20:57.19:0,57,854	0/0:9,0:9:24.08:0,24,359	1/1:0,25:25:75.24:974,75,0	0/0:11,0:11:33.10:0,33,475	0/0:28,0:28:84.25:0,84,1219	0/0:18,0:18:54.18:0,54,809	0/0:13,0:13:36.12:0,36,539	0/0:23,0:23:69.23:0,69,1022	0/0:18,0:18:48.12:0,48,693	0/0:23,0:23:69.22:0,69,1012	0/0:14,0:14:39.13:0,39,584	0/0:32,0:32:93.30:0,93,1374	0/0:21,0:21:60.20:0,60,898	0/0:18,0:18:54.15:0,54,748	0/0:23,0:23:66.22:0,66,986	0/0:13,0:13:39.12:0,39,558	0/0:16,0:16:48.16:0,48,719	0/0:19,0:19:51.17:0,51,764	0/0:6,0:6:15.05:0,15,225	0/0:18,0:18:51.17:0,51,764	0/0:20,0:20:60.20:0,60,898	0/0:17,0:17:51.17:0,51,761	1/1:0,18:18:54.18:701,54,0
chr10	95049313	.	TGTGC	T	62.74	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=-0.398;DP=474;FS=5.132;HRun=0;HaplotypeScore=103.5712;InbreedingCoeff=0.2788;MQ=55.79;MQ0=4;MQRankSum=-0.318;QD=0.94;ReadPosRankSum=-1.108;VQSLOD=1.4017;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:35.97:0,36,420	0/0:5,0:5:9.02:0,9,118	1/1:7,0:3:2.68:11,3,0	0/0:15,0:9:13.72:0,14,122	0/0:15,0:14:24.90:0,25,344	0/0:22,0:22:39.29:0,39,811	0/0:14,0:14:39.02:0,39,630	0/0:29,0:28:76.74:0,77,652	0/0:9,0:9:20.90:0,21,321	0/0:17,0:17:44.67:0,45,618	0/0:13,0:13:35.93:0,36,515	0/0:17,0:17:44.94:0,45,734	0/0:15,0:15:35.85:0,36,557	0/0:29,0:29:65.94:0,66,1376	0/0:17,0:17:41.80:0,42,643	0/0:9,0:9:26.85:0,27,394	0/1:30,0:30:91.53:92,0,754	0/1:30,0:30:58.26:58,0,494	0/0:16,0:16:36.81:0,37,274	0/0:9,0:9:17.78:0,18,237	0/0:18,0:17:47.72:0,48,546	0/0:7,0:7:20.80:0,21,255	0/0:11,0:11:29.74:0,30,374	0/0:30,4:34:44.48:0,44,1384	0/0:17,0:17:36.02:0,36,505	0/0:15,0:15:39.07:0,39,800	0/0:17,0:17:34.33:0,34,658	0/0:8,0:8:24.05:0,24,510
chr10	95049317	.	C	CGT	891.68	PASS	AB=0.929;AC=10;AF=0.192;AN=52;BaseQRankSum=0.905;DP=485;FS=1.313;HRun=0;HaplotypeScore=87.2359;InbreedingCoeff=-0.2445;MQ=55.52;MQ0=5;MQRankSum=-1.247;QD=4.95;ReadPosRankSum=2.217;VQSLOD=2.4744;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:31:3.41:3,0,85	0/1:5,0:5:12.26:12,0,28	./.	./.	0/1:13,0:12:42.13:42,0,84	0/0:26,0:26:16.15:0,16,353	0/0:15,0:15:24.05:0,24,261	0/0:28,0:27:20.63:0,21,291	0/1:8,0:9:45.07:45,0,52	0/0:17,0:17:27.04:0,27,291	0/0:14,0:15:26.89:0,27,275	0/0:16,0:16:27.08:0,27,305	0/0:13,0:13:17.29:0,17,259	0/0:29,0:29:2.45:0,2,669	0/1:19,0:19:99:108,0,137	0/1:9,0:9:30.61:31,0,111	0/1:16,16:33:99:411,0,127	0/1:11,16:29:29.69:334,0,30	0/1:17,0:17:12.08:12,0,28	0/0:7,0:8:14.83:0,15,146	0/0:17,0:16:18.05:0,18,203	0/0:6,0:7:8.81:0,9,81	0/0:8,0:11:11.66:0,12,95	0/0:37,0:38:20.49:0,20,635	0/1:15,0:15:27.94:28,0,145	0/0:13,0:14:35.93:0,36,379	0/0:21,0:21:32.02:0,32,335	0/0:8,0:8:18.05:0,18,204
chr10	95051600	.	TC	T	4525.40	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-6.159;DP=507;FS=0.000;HRun=10;HaplotypeScore=64.3946;InbreedingCoeff=0.8976;MQ=77.41;MQ0=1;MQRankSum=2.463;QD=16.76;ReadPosRankSum=4.925;VQSLOD=5.1944;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,1:24:18.65:0,19,346	1/1:2,8:10:18.84:184,19,0	0/0:33,0:25:33.16:0,33,365	0/1:14,0:10:1.59:2,0,86	1/1:11,17:29:76.37:590,76,0	0/0:17,0:17:20.91:0,21,173	0/0:4,0:5:8.83:0,9,69	0/0:29,0:29:20.74:0,21,392	1/1:2,16:18:29.99:260,30,0	1/1:3,16:19:42.90:390,43,0	1/1:3,24:27:65.64:530,66,0	0/0:12,0:13:28.68:0,29,243	0/0:20,0:21:42.16:0,42,384	0/0:12,0:12:20.57:0,21,182	1/1:0,14:14:29.99:260,30,0	1/1:3,22:25:47.98:417,48,0	0/0:4,0:14:11.62:0,12,83	0/0:12,0:12:29.96:0,30,279	1/1:3,11:14:17.85:252,18,0	1/1:9,21:30:2.93:355,3,0	1/1:0,9:9:15:130,15,0	0/0:11,0:11:6:0,6,57	0/0:17,0:17:26.98:0,27,244	0/0:10,0:10:18.01:0,18,177	1/1:3,15:18:41.99:364,42,0	1/1:4,17:21:43.89:401,44,0	1/1:0,22:22:44.99:390,45,0	0/0:18,0:18:42.05:0,42,423
chr10	95053871	.	TA	T	307.84	PASS	AB=0.813;AC=4;AF=0.071;AN=56;BaseQRankSum=4.378;DP=491;FS=3.212;HRun=13;HaplotypeScore=57.4638;InbreedingCoeff=0.3108;MQ=74.30;MQ0=3;MQRankSum=0.037;QD=5.50;ReadPosRankSum=0.539;VQSLOD=1.8888;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:33.02:0,33,307	0/0:7,0:7:15.02:0,15,142	0/0:23,0:17:10.48:0,10,61	0/1:22,0:13:6.98:7,0,55	0/0:33,0:33:66.09:0,66,637	0/0:16,0:16:27.04:0,27,263	0/0:4,0:4:11.94:0,12,105	0/1:8,12:20:16.62:219,0,17	0/0:14,0:14:32.78:0,33,288	0/0:23,0:26:64.53:0,65,576	0/0:25,2:28:27.35:0,27,457	0/0:16,0:16:35.27:0,35,324	0/0:13,0:13:18.42:0,18,318	0/0:12,1:13:5.75:0,6,193	0/0:17,0:17:45.04:0,45,421	0/0:8,0:8:21.02:0,21,198	0/0:21,1:22:23.03:0,23,373	0/0:9,0:11:13.94:0,14,145	0/0:12,1:13:2.13:0,2,177	0/0:30,0:30:63.16:0,63,573	0/0:12,0:12:23.06:0,23,205	0/0:7,1:9:1.86:0,2,167	0/0:13,1:14:11.14:0,11,266	0/0:12,0:12:5.78:0,6,212	0/0:20,0:22:56.91:0,57,529	0/0:23,0:25:54.04:0,54,507	0/0:28,1:31:49.61:0,50,583	1/1:3,10:14:18.91:190,19,0
chr10	95054155	.	CA	C	6821.47	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=10.053;DP=462;FS=11.338;HRun=5;HaplotypeScore=46.1233;InbreedingCoeff=0.9589;MQ=70.97;MQ0=0;MQRankSum=2.105;QD=29.53;ReadPosRankSum=1.984;VQSLOD=4.4507;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.12:0,54,699	1/1:0,7:7:18.05:204,18,0	0/0:13,0:13:17.42:0,17,348	0/0:13,0:12:32.90:0,33,430	1/1:1,22:23:63.18:715,63,0	0/0:17,0:17:51.17:0,51,698	0/0:11,0:11:33.11:0,33,449	0/0:24,0:24:66.69:0,67,904	1/1:0,8:8:24.07:272,24,0	1/1:2,28:30:81.21:908,81,0	1/1:0,26:26:72.20:817,72,0	0/0:5,0:5:12.04:0,12,164	0/0:18,0:18:51.16:0,51,679	0/0:14,0:14:42.14:0,42,574	1/1:0,14:14:36.10:408,36,0	1/1:0,14:14:36.10:408,36,0	0/0:26,0:26:72.20:0,72,950	0/0:28,0:28:75.12:0,75,956	1/1:2,13:15:39.09:430,39,0	1/1:1,14:15:36.10:408,36,0	1/1:3,5:8:15.04:170,15,0	0/0:2,0:2:3.01:0,3,41	0/0:14,0:14:36.12:0,36,492	0/0:4,0:4:9.01:0,9,106	1/1:1,19:20:54.15:613,54,0	1/1:1,26:27:78.18:856,78,0	1/1:2,22:24:54.15:612,54,0	0/0:22,0:22:63.21:0,63,861
chr10	95054534	.	T	TC	63.04	PASS	AB=0.692;AC=1;AF=0.018;AN=56;BaseQRankSum=3.272;DP=568;FS=9.047;HRun=1;HaplotypeScore=59.6320;InbreedingCoeff=-0.0183;MQ=84.58;MQ0=0;MQRankSum=-3.348;QD=7.00;ReadPosRankSum=-1.605;VQSLOD=-0.5053;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.18:0,54,699	0/0:11,0:11:27.07:0,27,336	0/0:23,0:21:58.38:0,58,689	0/0:15,0:14:39.12:0,39,487	0/0:30,0:30:90.29:0,90,1168	0/0:26,0:26:75.24:0,75,974	0/0:19,0:19:57.17:0,57,725	0/0:33,0:33:96.31:0,96,1247	0/0:17,0:17:51.14:0,51,630	0/0:23,0:23:66.19:0,66,822	0/0:23,0:23:66.20:0,66,843	0/0:22,0:22:66.21:0,66,855	0/0:21,0:21:63.20:0,63,817	0/0:26,0:26:75.23:0,75,960	0/0:29,0:29:87.27:0,87,1114	0/0:19,0:19:57.19:0,57,740	0/0:23,0:23:66.21:0,66,857	0/0:9,0:9:24.08:0,24,312	0/0:23,0:23:69.22:0,69,885	0/0:25,0:25:72.23:0,72,935	0/0:11,0:11:27.06:0,27,321	0/0:13,0:13:39.13:0,39,506	0/0:19,0:19:54.18:0,54,701	0/0:20,0:19:57.19:0,57,740	0/0:13,0:13:36.12:0,36,468	0/0:22,0:22:66.21:0,66,857	0/0:26,0:26:72.23:0,72,933	0/1:5,4:9:99:138,0,154
chr10	95057843	.	TA	T	6216.58	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-5.272;DP=564;FS=0.000;HRun=9;HaplotypeScore=75.9976;InbreedingCoeff=0.9346;MQ=68.78;MQ0=1;MQRankSum=0.898;QD=18.84;ReadPosRankSum=-0.713;VQSLOD=4.6905;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,2:25:17.37:0,17,666	1/1:1,7:8:21.01:192,21,0	1/1:11,0:8:6.02:17,6,0	0/0:7,0:7:2.45:0,2,49	1/1:1,27:28:77.89:688,78,0	0/0:22,0:22:66.15:0,66,738	0/0:19,0:19:54.15:0,54,615	1/1:41,0:41:32.75:75,33,0	1/1:2,20:22:51.03:466,51,0	1/1:2,25:27:74.93:662,75,0	1/1:5,26:31:65.93:587,66,0	0/0:20,0:20:47.56:0,48,557	0/0:17,0:17:51.04:0,51,534	0/0:21,0:21:57.54:0,58,612	1/1:0,20:20:57.03:521,57,0	1/1:3,24:27:63.03:576,63,0	0/0:21,0:21:48.11:0,48,534	0/0:22,0:22:57.10:0,57,618	1/1:2,12:14:35.99:322,36,0	1/1:2,20:22:59.65:489,60,0	1/1:0,16:16:45.02:411,45,0	0/0:17,0:17:51.05:0,51,542	0/0:24,0:24:60.17:0,60,682	0/0:19,0:19:48:0,48,485	1/1:2,13:15:30.02:274,30,0	1/1:2,19:21:57:512,57,0	1/1:3,19:22:47.61:421,48,0	1/1:5,0:5:2.11:5,2,0
chr10	95057851	.	AAT	A	1642.90	PASS	AB=0.933;AC=5;AF=0.089;AN=56;BaseQRankSum=-5.523;DP=559;FS=5.506;HRun=0;HaplotypeScore=100.3865;InbreedingCoeff=0.7133;MQ=70.44;MQ0=1;MQRankSum=2.180;QD=29.87;ReadPosRankSum=-3.742;VQSLOD=4.3021;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.02:0,72,1216	0/0:7,0:7:20.32:0,20,115	0/1:12,0:11:38.77:39,0,104	0/0:4,0:4:11.43:0,11,108	0/0:30,0:30:84.45:0,84,501	0/0:23,0:23:69.22:0,69,1259	0/0:19,0:19:57.18:0,57,1033	1/1:0,39:39:99:1638,117,0	0/0:21,0:21:52.31:0,52,303	0/0:29,0:29:82.69:0,83,524	0/0:27,0:27:69.49:0,69,413	0/0:18,0:18:54.13:0,54,869	0/0:19,0:19:57.13:0,57,922	0/0:22,0:22:63.63:0,64,1068	0/0:24,0:24:67.13:0,67,411	0/0:25,0:24:63.97:0,64,370	0/0:18,0:18:54.15:0,54,955	0/0:21,0:21:60.10:0,60,1060	0/0:15,0:15:44:0,44,276	0/0:25,0:25:73.23:0,73,469	0/0:17,0:17:46.52:0,47,268	0/0:18,0:18:54.17:0,54,946	0/0:23,0:23:69.18:0,69,1207	0/0:16,0:16:48.15:0,48,827	0/0:15,0:15:35.03:0,35,232	0/0:21,0:21:61.38:0,61,371	0/0:23,0:23:47.26:0,47,310	1/1:0,2:2:6.02:87,6,0
chr10	95058501	.	AGCCCT	A	2193.30	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.647;DP=524;FS=0.637;HRun=0;HaplotypeScore=95.8328;InbreedingCoeff=0.9862;MQ=74.10;MQ0=0;MQRankSum=-8.371;QD=54.83;ReadPosRankSum=-4.301;VQSLOD=2.9363;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.25:0,78,2346	0/0:10,0:10:30.10:0,30,969	0/0:12,0:12:30.10:0,30,923	0/0:7,0:7:17.89:0,18,360	0/0:40,0:40:99:0,120,3731	0/0:29,0:29:84.29:0,84,2663	0/0:5,0:5:15.05:0,15,474	1/1:4,24:28:72.21:1515,72,0	0/0:16,0:16:45.15:0,45,1452	0/0:20,0:20:60.21:0,60,1937	0/0:22,0:22:66.23:0,66,2058	0/0:15,0:15:45.15:0,45,1417	0/0:16,0:16:48.16:0,48,1485	0/0:17,0:17:51.16:0,51,1517	0/0:17,0:17:51.18:0,51,1644	0/0:14,0:14:42.14:0,42,1357	0/0:32,0:32:96.33:0,96,2996	0/0:30,0:30:90.31:0,90,2841	0/0:14,0:14:38.19:0,38,1209	0/0:24,0:24:72.25:0,72,2321	0/0:9,0:9:27.09:0,27,872	0/0:13,0:13:36.12:0,36,1143	0/0:24,0:24:72.25:0,72,2302	0/0:10,0:10:30.10:0,30,920	0/0:22,0:22:66.19:0,66,1949	0/0:21,0:21:63.22:0,63,1988	0/0:18,0:18:54.19:0,54,1727	1/1:0,12:12:36.12:800,36,0
chr10	95059270	.	G	GT	1207.20	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.791;DP=879;FS=1.383;HRun=5;HaplotypeScore=80.9585;InbreedingCoeff=0.9958;MQ=62.83;MQ0=1;MQRankSum=0.315;QD=30.18;ReadPosRankSum=-3.305;VQSLOD=2.6177;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:50:99:0,147,1569	0/0:16,0:16:48.12:0,48,516	0/0:24,0:18:48.01:0,48,474	0/0:18,0:17:38.83:0,39,359	0/0:32,0:32:90.19:0,90,948	0/0:26,0:26:69.15:0,69,733	0/0:30,0:30:84.15:0,84,875	1/1:4,29:33:84.26:1090,84,0	0/0:44,0:44:99:0,126,1340	0/0:36,0:36:99:0,108,1160	0/0:24,0:24:66.17:0,66,709	0/0:42,0:42:99:0,123,1281	0/0:45,0:45:99:0,129,1367	0/0:46,0:46:99:0,129,1368	0/0:36,0:36:99:0,102,1086	0/0:33,0:33:93.21:0,93,989	0/0:41,0:41:99:0,108,1160	0/0:26,0:26:75.19:0,75,805	0/0:14,0:14:39.07:0,39,409	0/0:24,0:24:66.16:0,66,709	0/0:42,0:42:99:0,113,1191	0/0:37,0:37:99:0,108,1153	0/0:18,0:18:54.14:0,54,579	0/0:39,0:38:99:0,117,1257	0/0:26,0:26:78.19:0,78,832	0/0:36,0:36:99:0,99,1028	0/0:33,0:33:99:0,99,1044	1/1:0,7:7:18.06:237,18,0
chr10	95063374	.	GCTCTCTCT	G	1001.12	PASS	AB=0.947;AC=13;AF=0.310;AN=42;BaseQRankSum=-0.028;DP=497;FS=21.746;HRun=0;HaplotypeScore=115.9864;InbreedingCoeff=0.3889;MQ=72.84;MQ0=17;MQRankSum=1.665;QD=8.78;ReadPosRankSum=2.060;VQSLOD=0.7949;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:3.48:0,3,114	0/0:6,0:6:3.48:0,3,107	0/0:27,0:18:0.89:0,1,2	./.	./.	1/1:9,1:12:15.05:327,15,0	1/1:15,0:15:3.48:74,3,0	0/0:42,0:39:6:0,6,68	0/0:23,0:22:3.01:0,3,39	1/1:16,0:16:6.14:129,6,0	./.	0/1:13,0:16:0:0,0,0	1/1:10,2:13:18.05:393,18,0	1/1:14,1:14:6.02:148,6,0	./.	0/0:18,0:18:6.15:0,6,203	0/1:15,0:14:33.91:34,0,104	0/0:11,0:10:12.41:0,12,89	0/0:14,0:14:4.70:0,5,84	0/0:12,0:11:0.47:0,0,1	0/0:32,0:31:9.02:0,9,194	./.	0/0:6,0:7:0.47:0,0,1	./.	./.	0/0:19,0:19:14.93:0,15,233	0/1:10,0:9:25.95:26,0,33	0/0:4,0:2:3.01:0,3,54
chr10	95063426	.	TCACACA	T	569.86	PASS	AB=0.971;AC=13;AF=0.283;AN=46;BaseQRankSum=-1.196;DP=468;FS=0.747;HRun=0;HaplotypeScore=121.5965;InbreedingCoeff=0.0019;MQ=37.39;MQ0=59;MQRankSum=-1.635;QD=3.56;ReadPosRankSum=2.779;VQSLOD=2.3392;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:22:15.05:0,15,340	0/1:3,1:3:11.21:78,0,11	./.	./.	./.	0/0:16,0:15:11.76:0,12,61	0/0:26,0:21:10.41:0,10,94	0/0:13,0:19:12.20:0,12,104	1/1:9,4:12:8.71:101,9,0	0/1:21,0:19:99:286,0,245	0/0:9,0:8:3.01:0,3,32	0/1:19,0:16:10.32:10,0,106	0/0:24,0:23:3.72:0,4,181	0/0:22,0:21:14.04:0,14,142	0/0:12,4:12:2.74:0,3,13	1/1:13,0:11:1.29:16,1,0	0/0:23,0:18:29.89:0,30,476	0/0:18,0:16:15.27:0,15,531	0/1:10,0:8:43.61:75,0,44	0/1:19,0:18:8.51:9,0,173	0/0:18,0:12:6:0,6,86	0/1:23,0:20:58.48:58,0,59	1/1:17,0:16:0.47:1,0,0	0/0:27,0:19:13.98:0,14,96	./.	0/1:21,0:19:65.80:66,0,287	0/0:17,0:15:3.25:0,3,264	./.
chr10	95063436	.	A	ACT	447.22	PASS	AB=1.000;AC=11;AF=0.220;AN=50;BaseQRankSum=-1.251;DP=456;FS=2.360;HRun=0;HaplotypeScore=114.7294;InbreedingCoeff=0.0792;MQ=39.66;MQ0=47;MQRankSum=-3.668;QD=3.13;ReadPosRankSum=-0.840;VQSLOD=2.1956;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:24:15.93:0,16,155	0/1:4,0:3:10.52:11,0,23	./.	./.	./.	0/0:17,0:16:12.28:0,12,107	0/0:28,0:23:8.62:0,9,120	0/0:19,0:16:32.19:0,32,209	0/1:10,0:10:3.51:13,0,4	0/1:22,0:20:33.74:236,0,34	0/0:3,6:9:3.01:0,3,34	0/0:20,0:18:23.86:0,24,306	0/0:21,0:20:35.10:0,35,368	0/0:22,0:21:14.20:0,14,161	0/0:13,0:11:2.74:0,3,12	0/1:9,0:7:5.89:14,0,6	0/0:26,0:21:38.22:0,38,406	0/0:19,0:17:44.91:0,45,500	1/1:7,0:5:10.93:71,11,0	0/1:19,0:18:7.51:42,0,8	0/1:14,0:10:17.08:25,0,17	0/0:25,0:22:26.89:0,27,333	0/1:16,0:15:0.13:0,0,0	0/0:25,0:17:20.95:0,21,235	0/0:14,0:13:0:0,0,0	0/1:22,0:20:52.87:53,0,93	0/1:20,0:19:58.33:117,0,58	0/0:11,0:9:2.98:0,3,22
chr10	95063444	.	TCACA	T	1540.98	PASS	AB=1.000;AC=25;AF=0.500;AN=50;BaseQRankSum=-1.630;DP=454;FS=0.826;HRun=0;HaplotypeScore=112.7057;InbreedingCoeff=0.5433;MQ=41.78;MQ0=40;MQRankSum=3.036;QD=6.73;ReadPosRankSum=-0.328;VQSLOD=2.1306;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:23:18.06:0,18,317	1/1:3,0:3:3:29,3,0	./.	0/0:1,0:1:2.98:0,3,22	./.	1/1:8,8:16:3.01:48,3,0	1/1:18,7:22:4.61:93,5,0	1/1:13,0:10:3.41:28,3,0	1/1:5,0:9:0.62:26,1,0	0/0:23,0:21:18.48:0,18,260	0/0:9,0:9:2.80:0,3,13	1/1:21,0:18:23.30:366,23,0	1/1:12,10:22:11.10:170,11,0	1/1:10,13:22:5.69:95,6,0	0/0:7,0:10:0:0,0,0	0/0:8,0:6:0:0,0,1	0/0:26,0:21:29.60:0,30,434	0/0:20,0:18:0.12:0,0,602	0/0:8,0:6:5.95:0,6,53	0/0:19,0:18:8.41:0,8,133	0/0:17,0:13:6.44:0,6,62	1/1:23,0:22:29.92:395,30,0	1/1:9,6:14:0.28:1,0,0	1/1:27,0:20:27.08:395,27,0	./.	0/0:25,0:23:4.78:0,5,213	0/1:19,0:18:0.58:1,0,207	1/1:10,0:9:5.97:48,6,0
chr10	95064520	.	C	CT	2253.19	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.374;DP=712;FS=17.793;HRun=1;HaplotypeScore=67.1339;InbreedingCoeff=0.9996;MQ=84.80;MQ0=0;MQRankSum=-3.537;QD=36.94;ReadPosRankSum=-1.728;VQSLOD=1.5660;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1387	0/0:11,0:11:33.11:0,33,429	0/0:29,0:29:81.24:0,81,1028	0/0:29,0:30:73.75:0,74,868	0/0:22,0:22:31.26:0,31,711	0/0:28,0:28:84.26:0,84,1074	0/0:28,0:28:72.22:0,72,921	1/1:6,36:42:99:1520,105,0	0/0:26,0:26:75.24:0,75,972	0/0:23,0:23:69.22:0,69,895	0/0:25,0:25:69.22:0,69,895	0/0:22,0:22:66.20:0,66,844	0/0:29,0:29:78.25:0,78,1012	0/0:21,0:21:63.20:0,63,818	0/0:35,0:35:99:0,102,1310	0/0:22,0:22:63.19:0,63,803	0/0:13,0:13:39.13:0,39,506	0/0:13,0:12:36.12:0,36,467	0/0:22,0:22:57.18:0,57,734	0/0:26,0:26:75.22:0,75,946	0/0:28,0:28:81.26:0,81,1052	0/0:19,0:19:54.13:0,54,657	0/0:33,0:33:96.31:0,96,1245	0/0:20,0:20:60.19:0,60,779	0/0:25,0:25:75.24:0,75,973	0/0:37,0:37:99:0,108,1401	0/0:26,0:25:75.24:0,75,972	1/1:0,19:19:57.19:854,57,0
chr10	95065360	.	TC	T	1304.90	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.307;DP=643;FS=24.385;HRun=3;HaplotypeScore=60.5973;InbreedingCoeff=0.9969;MQ=80.03;MQ0=1;MQRankSum=-0.604;QD=32.62;ReadPosRankSum=-2.023;VQSLOD=1.3390;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.26:0,78,1118	0/0:7,0:7:21.07:0,21,302	0/0:9,0:9:26.30:0,26,353	0/0:27,0:27:66.51:0,67,902	0/0:38,0:38:99:0,114,1638	0/0:30,0:30:84.25:0,84,1171	0/0:25,0:25:72.24:0,72,1036	1/1:1,27:28:81.23:980,81,0	0/0:23,0:23:66.21:0,66,933	0/0:26,0:26:78.24:0,78,1089	0/0:33,0:33:96.31:0,96,1363	0/0:18,0:18:54.17:0,54,751	0/0:20,0:20:60.16:0,60,807	0/0:28,0:28:84.25:0,84,1171	0/0:28,0:28:84.28:0,84,1209	0/0:19,0:19:57.18:0,57,803	0/0:19,0:19:57.19:0,57,817	0/0:12,0:12:30.10:0,30,426	0/0:28,0:28:78.26:0,78,1123	0/0:36,0:36:99:0,105,1491	0/0:26,0:25:75.25:0,75,1079	0/0:30,0:30:90.28:0,90,1261	0/0:15,0:15:42.06:0,42,562	0/0:18,0:18:54.16:0,54,758	0/0:20,0:20:57.19:0,57,819	0/0:18,0:18:54.17:0,54,762	0/0:22,0:22:66.21:0,66,928	1/1:0,12:12:36.11:446,36,0
chr10	95065573	.	ACTCTGT	A	3936.09	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.137;DP=682;FS=8.372;HRun=0;HaplotypeScore=138.7708;InbreedingCoeff=0.9837;MQ=69.18;MQ0=11;MQRankSum=-7.002;QD=23.57;ReadPosRankSum=-2.668;VQSLOD=2.5042;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:48.13:0,48,1267	1/1:1,8:9:21.03:386,21,0	0/0:27,0:18:18.06:0,18,373	0/0:46,0:35:30.09:0,30,507	1/1:8,11:18:24.08:478,24,0	0/0:38,0:38:81.28:0,81,2390	0/0:19,0:19:36.10:0,36,920	1/1:22,23:45:54.13:864,54,0	1/1:5,20:25:43.03:807,43,0	0/0:34,0:34:75.26:0,75,2224	0/0:16,0:16:36.12:0,36,1100	0/0:17,0:17:45.15:0,45,1380	0/0:28,0:28:57.18:0,57,1665	0/0:24,0:24:36.12:0,36,1071	1/1:10,11:20:24.08:483,24,0	1/1:8,11:19:21.07:428,21,0	0/0:28,0:28:57.15:0,57,1684	0/0:12,0:12:27.08:0,27,763	0/0:34,0:34:39.13:0,39,1035	0/0:25,0:25:42.11:0,42,1232	0/0:37,0:37:87.28:0,87,2483	0/0:16,0:16:30.10:0,30,916	0/0:18,0:18:36.12:0,36,1093	0/0:29,0:29:57.20:0,57,1779	1/1:8,7:14:15.05:301,15,0	0/0:20,0:20:42.14:0,42,1243	0/0:23,0:22:39.12:0,39,1080	1/1:11,3:14:9.03:187,9,0
chr10	95066425	.	AGTGTGTGT	A	2175.70	PASS	AB=0.877;AC=17;AF=0.327;AN=52;BaseQRankSum=2.204;DP=586;FS=8.018;HRun=0;HaplotypeScore=159.7527;InbreedingCoeff=0.5305;MQ=63.69;MQ0=15;MQRankSum=-7.608;QD=10.46;ReadPosRankSum=0.820;VQSLOD=1.7132;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:17:12.01:0,12,178	1/1:6,3:9:6.02:150,6,0	./.	0/0:40,0:23:0:0,0,0	1/1:19,3:25:6.49:131,6,0	0/0:28,0:28:11.09:0,11,393	0/0:25,0:23:9.27:0,9,352	./.	1/1:11,10:21:12.04:300,12,0	0/0:22,0:22:12.91:0,13,171	0/0:10,0:12:6:0,6,68	0/0:19,0:19:17.78:0,18,627	0/0:11,0:14:3:0,3,105	0/0:22,0:22:15.05:0,15,502	1/1:15,12:28:30.10:730,30,0	1/1:10,8:18:18.06:450,18,0	0/0:23,0:28:24.07:0,24,532	0/0:11,0:11:13.82:0,14,225	0/0:10,0:9:0.89:0,1,2	0/0:11,0:12:2.99:0,3,24	0/1:36,0:36:34.06:34,0,90	0/0:27,0:27:21.07:0,21,771	0/0:19,0:19:8.68:0,9,206	0/0:15,0:21:6.02:0,6,200	1/1:11,6:18:12.04:281,12,0	0/1:15,0:24:89.46:89,0,115	1/1:8,0:17:17.52:135,18,0	0/1:10,0:10:29.76:50,0,30
chr10	95067055	.	G	GA	3198.87	PASS	AB=0.806;AC=41;AF=0.759;AN=54;BaseQRankSum=0.513;DP=481;FS=3.681;HRun=12;HaplotypeScore=81.1729;InbreedingCoeff=0.5053;MQ=40.14;MQ0=28;MQRankSum=-3.497;QD=9.41;ReadPosRankSum=-0.452;VQSLOD=2.9935;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:34:43.13:0,43,431	0/1:4,4:8:3.82:125,0,4	./.	0/1:28,0:3:5.84:6,0,14	1/1:18,7:22:19.06:290,19,0	1/1:12,0:14:12.28:50,12,0	1/1:7,0:9:8.99:44,9,0	0/0:8,0:31:39.46:0,39,114	1/1:8,3:10:14.99:136,15,0	1/1:9,7:15:22.18:247,22,0	1/1:6,7:12:24.92:232,25,0	1/1:10,0:12:6.99:33,7,0	1/1:15,1:14:8.94:49,9,0	1/1:16,0:21:14.88:114,15,0	1/1:5,7:9:12.02:115,12,0	1/1:4,7:10:26.08:238,26,0	0/0:25,0:25:52.38:0,52,354	0/0:25,1:23:12.27:0,12,239	1/1:16,14:29:0.85:388,1,0	0/1:10,5:15:12.86:192,0,13	1/1:2,1:3:6.01:58,6,0	1/1:5,0:5:1.91:11,2,0	1/1:9,0:12:16.23:73,16,0	1/1:8,0:8:2.84:14,3,0	1/1:10,8:18:2.96:206,3,0	1/1:12,13:25:33.45:446,33,0	1/1:13,7:17:11.57:294,12,0	0/0:1,0:1:0:0,0,0
chr10	95067080	.	GA	G	2851.05	PASS	AB=0.786;AC=45;AF=0.804;AN=56;BaseQRankSum=2.532;DP=494;FS=1.075;HRun=12;HaplotypeScore=86.2179;InbreedingCoeff=0.5062;MQ=58.61;MQ0=15;MQRankSum=-3.663;QD=7.46;ReadPosRankSum=-1.199;VQSLOD=2.4970;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:29:58.58:0,59,541	1/1:1,6:7:14.94:116,15,0	0/0:41,0:12:5.25:0,5,101	0/1:40,0:11:12.66:13,0,27	1/1:10,10:19:12.38:257,12,0	1/1:1,0:14:20.37:59,20,0	1/1:3,0:8:9.95:29,10,0	1/1:16,0:43:52.96:157,53,0	1/1:4,7:10:23.90:184,24,0	1/1:6,11:16:32.81:251,33,0	1/1:5,10:15:5.41:224,5,0	1/1:2,0:8:13.25:38,13,0	1/1:7,0:13:5.59:29,6,0	1/1:9,0:19:11.45:51,11,0	1/1:4,9:12:20.90:162,21,0	1/1:4,6:9:18.38:141,18,0	0/0:24,0:25:49.90:0,50,635	0/0:16,0:16:20.29:0,20,194	0/1:15,12:25:12.10:274,0,12	1/1:6,9:15:23.89:186,24,0	1/1:1,2:3:2.99:23,3,0	1/1:1,0:5:8.15:23,8,0	1/1:5,0:15:6.38:33,6,0	1/1:2,0:7:4.06:12,4,0	1/1:6,10:16:32.67:245,33,0	1/1:12,16:28:48.60:359,49,0	0/1:9,8:17:4.82:139,0,5	1/1:0,0:4:4.07:12,4,0
chr10	95067091	.	AAG	A	642.72	PASS	AB=0.957;AC=16;AF=0.286;AN=56;BaseQRankSum=6.823;DP=461;FS=9.289;HRun=0;HaplotypeScore=94.2128;InbreedingCoeff=0.2235;MQ=67.55;MQ0=7;MQRankSum=-5.551;QD=3.99;ReadPosRankSum=0.503;VQSLOD=1.4459;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:66.02:0,66,878	0/0:7,0:7:17.39:0,17,100	0/0:40,0:14:19.78:0,20,262	0/0:33,1:13:10.34:0,10,156	0/0:23,0:22:37.16:0,37,342	1/1:14,0:14:2.93:77,3,0	0/1:7,0:7:30.63:50,0,31	0/1:42,0:40:99:131,0,176	0/0:9,0:9:18.96:0,19,118	0/0:15,0:14:34.64:0,35,218	0/0:17,0:17:45.87:0,46,314	0/1:9,2:11:46.23:98,0,46	1/1:9,1:10:1.08:115,1,0	0/1:17,1:18:7.54:153,0,8	0/0:15,0:14:27.45:0,27,175	0/1:10,1:11:9.73:10,0,130	0/0:30,0:30:85.98:0,86,1111	0/1:12,0:12:0.15:0,0,240	0/0:18,0:18:45.39:0,45,317	0/0:12,0:12:29.13:0,29,173	0/0:2,0:2:2.90:0,3,16	0/1:7,0:7:21.48:21,0,23	0/1:16,1:17:0.43:101,0,0	1/1:8,0:8:5.64:26,6,0	0/0:13,0:13:15.55:0,16,152	0/0:23,0:23:43.90:0,44,345	0/0:14,0:13:7.84:0,8,108	1/1:4,0:4:4.26:12,4,0
chr10	95067469	.	A	AGTGT	4940.82	PASS	AC=42;AF=0.808;AN=52;BaseQRankSum=1.632;DP=498;FS=14.590;HRun=0;HaplotypeScore=118.5342;InbreedingCoeff=0.8233;MQ=54.48;MQ0=17;MQRankSum=-3.350;QD=14.75;ReadPosRankSum=-2.595;VQSLOD=2.8463;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:30:17.82:0,18,153	1/1:2,1:6:9.03:175,9,0	./.	./.	1/1:9,0:8:2.22:7,2,0	1/1:17,4:23:14.26:208,14,0	1/1:10,10:22:14.52:237,15,0	1/1:30,0:28:19.70:203,20,0	1/1:10,4:18:26.83:517,27,0	1/1:15,0:16:18.02:289,18,0	1/1:8,0:9:5.57:75,6,0	1/1:5,3:11:22.89:281,23,0	1/1:10,0:11:14.93:178,15,0	1/1:8,9:16:14.97:354,15,0	1/1:8,5:15:17.98:388,18,0	1/1:6,2:13:11.69:187,12,0	0/0:22,0:25:31.95:0,32,426	0/0:14,0:14:14.90:0,15,177	1/1:16,0:17:18.53:292,19,0	1/1:9,1:14:8.86:175,9,0	1/1:34,1:35:8.05:139,8,0	1/1:6,0:8:8.50:94,8,0	0/0:9,0:10:12.02:0,12,145	0/0:26,0:27:30.95:0,31,482	1/1:14,1:15:11.12:130,11,0	1/1:20,0:21:33.65:474,34,0	1/1:12,0:14:24.07:383,24,0	1/1:3,0:7:9.03:155,9,0
chr10	95067521	.	AAT	A	2464.49	PASS	AB=0.889;AC=39;AF=0.722;AN=54;BaseQRankSum=-0.985;DP=303;FS=8.841;HRun=0;HaplotypeScore=71.3969;InbreedingCoeff=0.5792;MQ=68.71;MQ0=8;MQRankSum=1.808;QD=15.31;ReadPosRankSum=-1.100;VQSLOD=2.1462;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:38.01:0,38,551	1/1:4,0:4:3.01:37,3,0	0/0:35,0:13:5.46:0,5,26	0/0:37,0:13:7.60:0,8,71	1/1:2,6:7:18.06:225,18,0	1/1:4,11:15:27.05:321,27,0	1/1:6,1:7:5.97:62,6,0	0/0:11,0:17:22.04:0,22,141	1/1:2,3:5:6.02:75,6,0	1/1:3,6:9:21.06:252,21,0	1/1:2,7:9:18.03:225,18,0	1/1:5,2:7:2.97:37,3,0	1/1:1,5:6:12.04:150,12,0	0/0:2,2:4:0:0,0,0	1/1:3,1:4:3.01:38,3,0	1/1:4,2:6:2.98:37,3,0	0/0:16,0:17:39.13:0,39,643	0/1:7,1:8:22.47:22,0,183	1/1:8,7:15:21.02:234,21,0	1/1:6,2:8:2.94:25,3,0	1/1:6,4:10:11.56:132,12,0	./.	1/1:2,6:8:12.01:149,12,0	1/1:6,1:7:6:61,6,0	1/1:2,1:3:2.98:37,3,0	1/1:3,9:12:26.18:305,26,0	1/1:4,6:10:18.01:207,18,0	0/0:6,0:8:5.53:0,6,48
chr10	95068303	.	T	TTCTG	798.15	PASS	AB=0.905;AC=5;AF=0.089;AN=56;BaseQRankSum=-3.891;DP=590;FS=28.799;HRun=0;HaplotypeScore=91.1818;InbreedingCoeff=0.7268;MQ=58.55;MQ0=2;MQRankSum=-3.814;QD=15.96;ReadPosRankSum=-0.557;VQSLOD=1.3477;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:75.19:0,75,1316	0/0:7,0:7:21.07:0,21,399	0/0:5,0:4:5.71:0,6,113	0/0:17,0:11:29.31:0,29,460	0/0:27,0:27:75.26:0,75,1417	0/0:24,0:24:63.22:0,63,1196	0/0:20,0:22:51.17:0,51,934	1/1:7,16:16:27.09:576,27,0	0/0:17,0:17:45.14:0,45,822	0/0:26,0:26:69.24:0,69,1304	0/0:14,0:14:33.11:0,33,620	0/0:22,0:22:54.18:0,54,995	0/0:37,0:37:99:0,108,2021	0/0:20,0:20:60.21:0,60,1139	0/0:21,0:21:57.16:0,57,1034	0/0:23,0:23:66.22:0,66,1224	0/0:35,0:35:90.31:0,90,1709	0/1:17,0:18:25.40:25,0,665	0/0:20,0:19:51.17:0,51,963	0/0:23,0:23:66.21:0,66,1172	0/0:21,0:21:57.20:0,57,1075	0/0:21,0:21:60.21:0,60,1118	0/0:20,0:20:45.15:0,45,841	0/0:20,0:20:54.17:0,54,992	0/0:11,0:11:33.09:0,33,564	0/0:28,0:27:81.27:0,81,1485	0/0:27,0:27:81.24:0,81,1502	1/1:0,5:5:12.04:322,12,0
chr10	95069077	.	TA	T	8130.54	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=6.746;DP=579;FS=12.013;HRun=11;HaplotypeScore=59.3569;InbreedingCoeff=0.8830;MQ=68.75;MQ0=4;MQRankSum=-1.913;QD=16.66;ReadPosRankSum=0.455;VQSLOD=4.9660;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:78.13:0,78,803	1/1:1,8:9:23.96:197,24,0	0/1:32,0:11:1.34:1,0,142	0/0:18,0:8:8.60:0,9,51	1/1:2,31:33:86.79:706,87,0	1/1:3,15:18:41.95:345,42,0	1/1:2,13:15:32.96:271,33,0	1/1:6,0:28:42.22:123,42,0	1/1:2,13:15:32.96:271,33,0	1/1:3,20:23:59.92:492,60,0	1/1:1,23:24:47.78:376,48,0	1/1:2,13:15:29.96:246,30,0	1/1:3,21:24:53.93:443,54,0	1/1:2,20:22:56.93:468,57,0	1/1:2,20:22:53.93:443,54,0	1/1:3,13:16:35.95:296,36,0	0/0:25,0:25:66.17:0,66,704	0/0:16,2:18:17.47:0,17,390	1/1:4,22:26:65.89:538,66,0	1/1:1,17:18:47.88:389,48,0	1/1:0,13:13:32.96:271,33,0	1/1:0,9:9:26.93:216,27,0	1/1:3,7:10:11.96:99,12,0	1/1:0,8:10:22.05:160,22,0	1/1:2,22:24:50.94:419,51,0	1/1:5,26:32:73.91:596,74,0	1/1:4,35:40:91.92:743,92,0	1/1:2,0:7:8.14:24,8,0
chr10	95069884	.	GTTTTTC	G	1494.59	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.441;DP=478;FS=4.447;HRun=0;HaplotypeScore=98.7918;InbreedingCoeff=0.9615;MQ=74.52;MQ0=0;MQRankSum=-5.313;QD=35.59;ReadPosRankSum=-3.289;VQSLOD=2.5324;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:51.18:0,51,1651	0/0:6,0:6:15.05:0,15,507	0/0:12,0:13:20.02:0,20,694	0/0:13,0:14:25.09:0,25,667	0/0:27,0:27:78.23:0,78,2341	0/0:28,0:28:69.24:0,69,2320	0/0:12,0:12:27.09:0,27,913	1/1:11,24:35:71.95:1243,72,0	0/0:22,0:22:60.18:0,60,1940	0/0:22,0:22:60.20:0,60,1927	0/0:18,0:18:45.15:0,45,1496	0/0:10,0:10:27.09:0,27,913	0/0:20,0:20:48.15:0,48,1543	0/0:18,0:18:48.16:0,48,1623	0/0:17,0:17:45.15:0,45,1497	0/0:10,0:10:27.08:0,27,837	0/0:4,0:4:12.04:0,12,406	0/0:10,0:10:21.07:0,21,700	0/0:22,0:22:54.19:0,54,1803	0/0:27,0:27:75.24:0,75,2393	0/0:8,0:8:18.04:0,18,531	0/0:15,0:15:36.12:0,36,1215	0/0:13,0:13:39.05:0,39,1234	0/0:9,0:9:21.07:0,21,710	0/0:18,0:18:54.17:0,54,1739	0/0:21,0:21:54.17:0,54,1650	0/0:31,0:29:87.27:0,87,2788	1/1:2,5:7:21.03:372,21,0
chr10	95069946	.	AT	A	3553.17	PASS	AB=0.889;AC=19;AF=0.339;AN=56;BaseQRankSum=11.413;DP=501;FS=19.271;HRun=10;HaplotypeScore=56.8070;InbreedingCoeff=0.8739;MQ=78.97;MQ0=1;MQRankSum=-2.880;QD=17.33;ReadPosRankSum=-0.731;VQSLOD=2.2698;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39.09:0,39,423	0/0:5,0:6:17.88:0,18,180	0/1:14,2:16:21.81:22,0,184	0/0:18,1:19:1.13:0,1,373	0/0:29,0:30:68.98:0,69,731	0/0:24,0:24:72.18:0,72,782	0/0:8,0:8:24.05:0,24,256	1/1:8,0:32:44.08:131,44,0	0/0:24,2:26:14.05:0,14,601	1/1:2,29:31:83.97:729,84,0	1/1:2,17:19:47.98:417,48,0	0/0:7,0:7:18.05:0,18,199	0/0:23,0:23:63.16:0,63,690	0/0:14,0:14:36.10:0,36,398	0/0:20,0:22:50.97:0,51,546	0/0:20,0:22:63:0,63,678	0/0:7,0:7:15.04:0,15,166	0/0:8,0:8:18.05:0,18,199	1/1:3,16:19:47.98:417,48,0	1/1:2,32:34:92.98:807,93,0	1/1:0,6:6:18:156,18,0	0/0:15,0:15:42.11:0,42,457	0/0:24,0:24:72:0,72,760	0/0:9,0:10:26.91:0,27,280	0/0:16,0:17:50.97:0,51,545	1/1:2,14:16:38.98:338,39,0	1/1:2,20:22:56.98:495,57,0	1/1:1,0:9:14.26:42,14,0
chr10	95072874	.	C	CA	1555.36	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.326;DP=686;FS=3.770;HRun=0;HaplotypeScore=70.5268;InbreedingCoeff=0.9907;MQ=84.93;MQ0=0;MQRankSum=-5.483;QD=36.17;ReadPosRankSum=-2.568;VQSLOD=2.4226;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1349	0/0:17,0:17:48.16:0,48,670	0/0:18,0:18:54.13:0,54,716	0/0:26,0:26:75.16:0,75,1000	0/0:24,0:24:69.23:0,69,964	0/0:26,0:26:75.25:0,75,1049	0/0:27,0:27:81.27:0,81,1130	1/1:2,36:38:99:1469,108,0	0/0:25,0:25:75.25:0,75,1048	0/0:23,0:23:69.23:0,69,965	0/0:28,0:28:84.28:0,84,1173	0/0:16,0:16:45.15:0,45,628	0/0:27,0:27:78.25:0,78,1071	0/0:25,0:25:69.23:0,69,962	0/0:18,0:18:54.17:0,54,738	0/0:29,0:29:84.28:0,84,1174	0/0:27,0:27:81.24:0,81,1113	0/0:8,0:8:24.08:0,24,335	0/0:13,0:13:39.13:0,39,544	0/0:33,0:33:96.31:0,96,1323	0/0:30,0:30:84.28:0,84,1174	0/0:22,0:22:66.22:0,66,923	0/0:35,0:35:99:0,105,1449	0/0:24,0:24:72.23:0,72,990	0/0:22,0:22:63.20:0,63,866	0/0:22,0:22:66.21:0,66,908	0/0:43,0:43:99:0,129,1784	1/1:0,5:5:15.05:204,15,0
chr10	95074069	.	CAGAG	C	955.37	PASS	AB=0.821;AC=20;AF=0.400;AN=50;BaseQRankSum=-0.555;DP=444;FS=2.732;HRun=0;HaplotypeScore=78.3466;InbreedingCoeff=0.4670;MQ=70.78;MQ0=7;MQRankSum=0.921;QD=5.16;ReadPosRankSum=1.144;VQSLOD=1.3213;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,1:17:9.93:85,0,10	1/1:7,0:6:2.96:19,3,0	./.	./.	0/0:16,0:16:9.01:0,9,116	1/1:9,0:9:3.01:46,3,0	1/1:11,4:15:9.03:139,9,0	0/0:27,0:27:7.84:0,8,100	0/0:14,0:17:8.23:0,8,37	0/0:18,0:18:30.92:0,31,554	0/0:10,0:8:6.02:0,6,119	1/1:11,0:11:3.01:46,3,0	1/1:16,0:16:5.96:45,6,0	1/1:18,0:18:8.67:61,9,0	0/0:16,0:19:26.56:0,27,497	0/0:16,0:16:27.02:0,27,567	1/1:5,6:11:7.82:137,8,0	./.	0/0:22,0:22:12.04:0,12,225	0/0:15,0:14:15.05:0,15,297	0/0:14,0:14:18.06:0,18,357	0/0:8,0:10:5.49:0,5,24	1/1:17,0:15:11.64:93,12,0	0/1:12,8:21:4.05:282,0,4	0/1:15,2:17:59.55:60,0,280	0/0:23,0:23:27.09:0,27,500	0/1:17,6:25:58.98:112,0,59	0/0:14,0:11:6.02:0,6,95
chr10	95074107	.	G	GAA	523.44	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.258;DP=531;FS=3.099;HRun=1;HaplotypeScore=79.7120;InbreedingCoeff=0.4856;MQ=55.95;MQ0=17;MQRankSum=0.650;QD=12.77;ReadPosRankSum=0.636;VQSLOD=0.7284;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:35.53:0,36,279	0/0:8,0:6:14.94:0,15,118	0/0:12,0:7:17.99:0,18,169	0/0:25,0:13:31.90:0,32,275	0/0:34,0:33:43.70:0,44,518	0/0:14,0:14:38.81:0,39,318	0/0:14,0:14:29.93:0,30,242	0/1:30,0:30:36.86:503,0,37	0/0:17,0:17:44.71:0,45,366	0/0:27,0:25:48.48:0,48,478	0/0:13,0:10:14.71:0,15,124	0/0:12,0:11:29.91:0,30,249	0/0:13,0:12:32.11:0,32,246	0/0:21,0:20:53.65:0,54,420	0/0:24,0:24:49.10:0,49,623	0/0:16,0:16:47.64:0,48,525	0/0:20,0:19:29.84:0,30,229	0/0:9,0:8:23.90:0,24,185	0/0:15,0:15:13.85:0,14,287	0/0:23,0:21:34.84:0,35,349	0/0:22,0:22:6.57:0,7,281	0/0:13,0:13:26.96:0,27,222	0/0:17,0:15:29.93:0,30,246	0/0:26,0:26:51.33:0,51,399	0/0:25,0:24:55.54:0,56,499	0/0:23,0:23:36.25:0,36,406	0/0:26,0:25:66.49:0,66,497	1/1:0,11:11:6.02:115,6,0
chr10	95076504	.	TA	T	616.94	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.908;DP=425;FS=1.773;HRun=9;HaplotypeScore=40.6390;InbreedingCoeff=0.8523;MQ=52.07;MQ0=29;MQRankSum=-4.444;QD=18.15;ReadPosRankSum=-1.923;VQSLOD=2.8669;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:75.18:0,75,850	0/0:3,0:3:6.02:0,6,69	0/0:8,0:7:21.02:0,21,227	0/0:1,0:1:3.01:0,3,35	0/0:27,0:17:48.14:0,48,554	0/0:13,0:12:33.02:0,33,352	0/0:17,0:16:32.85:0,33,366	1/1:5,20:21:60.02:545,60,0	0/0:15,0:15:27.70:0,28,342	0/0:13,0:13:36.11:0,36,414	0/0:14,0:10:21.06:0,21,242	0/0:13,0:13:33.10:0,33,381	0/0:16,0:16:45.13:0,45,519	0/0:10,0:10:27.08:0,27,312	0/0:19,0:18:36.11:0,36,415	0/0:13,0:12:30.05:0,30,332	0/0:21,0:20:42.11:0,42,474	0/0:16,1:16:14.68:0,15,423	0/0:7,0:6:18.05:0,18,207	0/0:19,0:16:45.13:0,45,515	0/0:12,0:11:24.07:0,24,277	0/0:14,0:10:21.06:0,21,242	0/0:19,0:18:48.14:0,48,548	0/0:14,0:12:30.05:0,30,331	0/0:21,3:19:48.12:0,48,554	0/0:12,0:12:36.09:0,36,402	0/0:21,0:20:48.14:0,48,554	1/1:1,8:8:21.01:192,21,0
chr10	95077305	.	T	TA	9049.85	PASS	AB=0.906;AC=45;AF=0.804;AN=56;BaseQRankSum=-5.538;DP=460;FS=11.108;HRun=9;HaplotypeScore=46.6817;InbreedingCoeff=0.7518;MQ=64.06;MQ0=7;MQRankSum=0.409;QD=23.94;ReadPosRankSum=-1.675;VQSLOD=4.3933;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:53.98:0,54,468	1/1:1,7:8:18.05:199,18,0	0/0:18,1:5:8.97:0,9,71	0/1:14,0:6:0:0,0,0	1/1:3,25:28:53.82:732,54,0	1/1:0,15:15:45.12:497,45,0	1/1:4,1:5:12.02:124,12,0	1/1:6,21:27:54.05:569,54,0	1/1:3,13:16:33.09:365,33,0	1/1:5,24:29:75.02:802,75,0	1/1:4,15:19:45:468,45,0	1/1:2,10:13:32.92:345,33,0	1/1:2,6:8:21.05:224,21,0	1/1:5,7:12:27.06:290,27,0	1/1:3,10:13:30.08:329,30,0	1/1:2,14:16:35.86:398,36,0	0/0:19,0:19:53.99:0,54,468	0/0:23,0:23:68.95:0,69,591	1/1:5,12:17:23.20:428,23,0	1/1:1,16:16:45.12:498,45,0	0/1:2,0:2:0:0,0,0	0/1:5,2:7:11.02:109,0,11	1/1:5,12:17:48.11:522,48,0	1/1:0,2:2:3.01:33,3,0	1/1:3,31:34:81.22:896,81,0	1/1:5,20:25:37.06:604,37,0	1/1:8,20:28:38.66:525,39,0	1/1:2,2:4:9.01:92,9,0
chr10	95077342	.	GA	G	2536.58	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=4.909;DP=486;FS=13.144;HRun=9;HaplotypeScore=72.0998;InbreedingCoeff=0.9673;MQ=68.41;MQ0=8;MQRankSum=-3.352;QD=21.50;ReadPosRankSum=0.635;VQSLOD=3.3999;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:64.55:0,65,758	0/0:7,0:7:21.01:0,21,227	0/0:27,1:13:32.57:0,33,273	0/0:18,0:7:17.27:0,17,133	0/0:29,0:30:90.06:0,90,995	1/1:3,12:15:39.02:357,39,0	1/1:0,7:7:18.01:165,18,0	1/1:12,14:26:48:434,48,0	0/0:12,0:13:26.91:0,27,291	0/0:29,0:29:69.20:0,69,789	0/0:25,0:25:72.21:0,72,831	1/1:0,13:13:39.02:357,39,0	1/1:2,5:7:18.01:165,18,0	1/1:2,13:15:42.02:384,42,0	0/0:11,0:11:27.08:0,27,312	0/0:17,0:17:42.57:0,43,468	0/0:19,0:19:48.09:0,48,515	0/0:28,0:28:75.18:0,75,840	0/0:15,0:13:36.09:0,36,398	0/0:28,0:28:81.19:0,81,912	0/0:2,0:2:6:0,6,58	1/1:1,2:3:9:80,9,0	1/1:3,18:21:57.01:512,57,0	1/1:0,5:5:15.01:137,15,0	0/0:25,1:26:38.72:0,39,684	0/0:21,0:21:60.17:0,60,683	0/0:24,0:24:60.17:0,60,685	1/1:0,6:6:18.01:165,18,0
chr10	95079573	.	G	GAT	446.17	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.898;DP=589;FS=33.620;HRun=0;HaplotypeScore=108.2719;InbreedingCoeff=0.8620;MQ=66.99;MQ0=7;MQRankSum=-5.713;QD=11.15;ReadPosRankSum=-6.640;VQSLOD=0.6201;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:52.90:0,53,710	0/0:8,0:7:11.25:0,11,101	0/0:24,0:17:35.08:0,35,375	0/0:30,0:20:45.02:0,45,503	0/0:36,0:36:60.01:0,60,680	0/0:24,0:22:51.05:0,51,563	0/0:16,0:16:30.09:0,30,369	1/1:28,10:34:26.10:518,26,0	0/0:26,0:26:47.27:0,47,509	0/0:31,0:30:75.24:0,75,946	0/0:28,0:28:60.18:0,60,755	0/0:17,0:17:29.56:0,30,315	0/0:22,0:22:43.60:0,44,535	0/0:18,0:18:20.92:0,21,310	0/0:10,0:10:7.41:0,7,145	0/0:16,0:16:20.82:0,21,311	0/0:12,0:11:21.07:0,21,267	0/0:16,0:15:35.76:0,36,412	0/0:14,0:14:32.69:0,33,392	0/0:38,0:38:81.22:0,81,1000	0/0:18,0:18:39.12:0,39,496	0/0:23,0:23:42.04:0,42,480	0/0:15,0:15:15.18:0,15,247	0/0:18,0:18:38.72:0,39,399	0/0:15,0:15:15.47:0,15,216	0/0:19,0:19:45.13:0,45,560	0/0:23,0:23:51.16:0,51,648	1/1:1,0:2:5.68:39,6,0
chr10	95079587	.	TAC	T	1640.98	PASS	AB=0.755;AC=12;AF=0.222;AN=54;BaseQRankSum=-3.988;DP=613;FS=20.730;HRun=0;HaplotypeScore=114.2984;InbreedingCoeff=0.3084;MQ=58.85;MQ0=12;MQRankSum=3.128;QD=6.64;ReadPosRankSum=0.540;VQSLOD=1.9297;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,9:39:25.37:217,25,0	0/0:4,0:6:11.95:0,12,97	./.	0/0:27,0:16:5.78:0,6,32	0/0:15,0:36:10.52:0,11,72	0/0:12,0:25:39.03:0,39,414	0/0:13,0:16:14.88:0,15,153	0/0:29,0:24:20.64:0,21,145	0/0:17,0:30:8.39:0,8,77	1/1:15,11:25:32.06:329,32,0	0/1:14,12:27:18.56:201,0,19	0/0:10,0:19:12:0,12,105	0/0:16,0:20:14.42:0,14,232	0/0:6,0:16:17.87:0,18,154	0/0:4,0:13:2.74:0,3,12	0/0:8,0:22:8.95:0,9,72	0/0:14,0:12:14.88:0,15,195	0/0:18,0:16:1.50:0,1,305	0/1:12,3:15:13.08:86,0,13	0/1:25,19:45:10.90:217,0,11	0/1:16,11:25:59.48:87,0,59	0/0:12,0:22:24.03:0,24,262	0/0:7,0:14:9.01:0,9,98	0/1:14,1:20:1.25:1,0,165	0/0:3,0:15:14.49:0,14,102	0/1:12,12:24:6.20:348,0,6	1/1:7,16:24:29.78:313,30,0	0/0:2,0:2:5.85:0,6,36
chr10	95079974	.	T	TA	889.26	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.209;DP=632;FS=0.736;HRun=6;HaplotypeScore=57.9624;InbreedingCoeff=0.9638;MQ=81.27;MQ0=0;MQRankSum=-2.689;QD=27.79;ReadPosRankSum=-2.966;VQSLOD=2.9479;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.12:0,51,520	0/0:6,0:6:18.04:0,18,184	0/0:16,0:16:45.02:0,45,429	0/0:16,0:16:42.09:0,42,424	0/0:36,0:36:84.19:0,84,857	0/0:26,0:26:66.15:0,66,673	0/0:20,0:20:57.13:0,57,581	1/1:4,24:28:72.21:890,72,0	0/0:24,0:24:63.14:0,63,643	0/0:28,0:28:60.13:0,60,612	0/0:26,0:26:60.13:0,60,612	0/0:14,0:14:42.10:0,42,429	0/0:31,0:31:84.17:0,84,850	0/0:23,0:23:66.12:0,66,665	0/0:23,0:23:63.14:0,63,643	0/0:27,0:26:69.15:0,69,704	0/0:16,0:16:45.10:0,45,458	0/0:9,0:9:24.05:0,24,245	0/0:17,0:17:51.12:0,51,520	0/0:38,0:38:99:0,105,1071	0/0:23,0:23:69.14:0,69,696	0/0:23,0:23:63.12:0,63,635	0/0:27,0:27:78.17:0,78,795	0/0:11,0:11:30.07:0,30,306	0/0:27,0:27:78.17:0,78,790	0/0:25,0:25:66.14:0,66,673	0/0:51,0:51:99:0,129,1287	1/1:0,4:4:9.03:113,9,0
chr10	95080423	.	T	TTG	1669.66	PASS	AB=0.794;AC=39;AF=0.780;AN=50;BaseQRankSum=3.406;DP=465;FS=16.325;HRun=0;HaplotypeScore=119.1154;InbreedingCoeff=0.2237;MQ=63.08;MQ0=10;MQRankSum=-2.692;QD=5.00;ReadPosRankSum=-1.812;VQSLOD=1.6854;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:24:10.87:0,11,179	1/1:6,0:7:6:52,6,0	./.	./.	1/1:24,0:24:8.29:97,8,0	1/1:12,0:13:6.02:82,6,0	0/1:8,5:13:38.36:159,0,38	1/1:21,0:19:2.92:17,3,0	1/1:12,0:16:15:131,15,0	1/1:24,0:24:26.78:216,27,0	1/1:15,0:15:2.98:21,3,0	1/1:8,1:8:3.01:44,3,0	0/1:8,1:9:17.13:126,0,17	0/1:13,4:18:52.60:77,0,53	1/1:13,0:13:2.98:22,3,0	1/1:11,0:12:6:52,6,0	0/0:26,1:32:0.98:0,1,326	0/0:11,0:12:4.26:0,4,64	1/1:17,0:17:5.98:48,6,0	1/1:17,0:17:12.64:117,13,0	./.	1/1:8,5:13:6.02:88,6,0	1/1:11,0:11:10.75:73,11,0	1/1:10,2:11:3.01:44,3,0	1/1:20,0:22:14.76:111,15,0	1/1:28,0:28:26.51:203,27,0	1/1:16,0:15:3:26,3,0	0/0:5,0:5:1.82:0,2,5
chr10	95080594	.	GGTTTTTTGTTT	G	12349.22	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=11.546;DP=436;FS=18.881;HRun=0;HaplotypeScore=158.2941;InbreedingCoeff=0.7243;MQ=67.15;MQ0=5;MQRankSum=-9.657;QD=52.77;ReadPosRankSum=2.773;VQSLOD=3.3768;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:63.21:0,63,2982	0/0:5,0:5:15.05:0,15,780	0/0:23,0:15:34.76:0,35,777	0/0:19,0:12:29.45:0,29,636	0/0:19,0:19:51.17:0,51,2340	1/1:22,0:22:39.13:951,39,0	0/1:10,0:10:27.37:137,0,27	0/0:23,0:23:56.97:0,57,677	0/0:10,0:10:27.08:0,27,1231	1/1:0,12:12:36.12:1120,36,0	1/1:1,18:19:51.13:1509,51,0	1/1:9,0:9:18.06:439,18,0	1/1:12,0:12:9.03:219,9,0	0/1:15,0:14:47.89:477,0,48	0/0:11,0:11:27.09:0,27,1485	0/0:11,0:11:24.08:0,24,1264	0/0:22,0:22:57.19:0,57,2281	0/0:11,0:11:30.06:0,30,1508	1/1:4,15:16:45.11:1109,45,0	1/1:1,25:26:72.13:2046,72,0	1/1:3,3:6:6.02:186,6,0	0/1:9,0:9:84.77:369,0,85	1/1:32,0:32:13.77:1342,14,0	1/1:10,0:10:9.03:220,9,0	0/0:20,0:20:54.16:0,54,2353	1/1:2,17:19:51.17:1431,51,0	1/1:4,10:14:24.08:794,24,0	0/0:3,0:3:3.01:0,3,40
chr10	95080602	.	GTTTGTTTTTTGTT	G	10036.80	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=10.761;DP=430;FS=17.932;HRun=0;HaplotypeScore=180.9237;InbreedingCoeff=0.8538;MQ=68.31;MQ0=6;MQRankSum=-11.610;QD=45.01;ReadPosRankSum=4.728;VQSLOD=3.2623;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.19:0,69,3475	0/0:6,0:6:18.06:0,18,1070	0/0:28,0:16:33.81:0,34,966	0/0:24,0:16:40.65:0,41,771	0/0:21,0:21:60.17:0,60,3223	1/1:0,20:20:39.13:1495,39,0	1/1:2,9:11:6.02:230,6,0	0/0:23,0:23:56.91:0,57,818	0/0:9,0:9:24.08:0,24,1328	1/1:12,0:12:19.80:462,20,0	1/1:18,0:18:36.03:619,36,0	1/1:1,9:10:18.06:690,18,0	1/1:1,8:9:9.03:345,9,0	1/1:3,13:15:21.07:800,21,0	0/0:10,0:10:27.09:0,27,1712	0/0:10,0:10:27.09:0,27,1558	0/0:21,0:21:48.15:0,48,2434	0/0:11,0:11:27.09:0,27,1748	0/1:18,0:15:68.15:364,0,68	1/1:26,0:26:51.59:855,52,0	1/1:3,0:3:6.02:77,6,0	1/1:2,9:11:21.07:683,21,0	1/1:1,29:30:60.01:2218,60,0	1/1:1,10:11:9.03:345,9,0	0/0:18,0:18:48.16:0,48,2556	1/1:17,0:17:17.12:498,17,0	1/1:11,0:11:24.08:356,24,0	0/0:1,0:1:3.01:0,3,54
chr10	95080607	.	TTTTTTG	T	5799.74	PASS	AB=1.000;AC=27;AF=0.500;AN=54;BaseQRankSum=13.461;DP=440;FS=4.820;HRun=0;HaplotypeScore=144.8219;InbreedingCoeff=0.4451;MQ=68.42;MQ0=7;MQRankSum=-9.308;QD=20.49;ReadPosRankSum=2.822;VQSLOD=4.5314;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:63.16:0,63,1761	0/0:6,0:6:18.06:0,18,548	0/1:29,0:16:7.68:8,0,428	0/0:28,0:19:1.35:0,1,345	0/0:22,0:22:54.19:0,54,1729	1/1:20,0:20:39.13:545,39,0	1/1:10,0:10:6.02:84,6,0	1/1:5,18:23:51.15:903,51,0	0/0:8,0:8:24.08:0,24,665	0/1:15,0:15:99:348,0,159	0/1:21,0:21:97.83:460,0,98	1/1:9,0:9:18.06:252,18,0	1/1:8,0:8:9.03:126,9,0	1/1:14,0:13:21.07:289,21,0	0/0:9,0:9:27.09:0,27,877	0/0:9,0:9:27.09:0,27,801	0/0:22,0:22:39.13:0,39,1203	0/0:10,0:10:30.10:0,30,963	0/1:20,0:17:99:292,0,186	0/1:26,0:26:4.13:632,0,4	0/1:8,0:8:46.07:46,0,198	1/1:11,0:11:17.22:224,17,0	1/1:30,0:30:57.11:797,57,0	1/1:10,0:10:9.03:126,9,0	0/0:17,0:17:45.15:0,45,1329	0/1:19,0:19:49.98:383,0,50	1/1:10,0:10:24.07:284,24,0	./.
chr10	95080733	.	T	TA	3123.95	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-8.142;DP=485;FS=0.420;HRun=8;HaplotypeScore=52.1107;InbreedingCoeff=0.9674;MQ=69.05;MQ0=1;MQRankSum=0.067;QD=25.19;ReadPosRankSum=1.240;VQSLOD=4.2993;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72:0,72,645	0/0:10,0:10:26.95:0,27,235	0/0:11,0:10:4.96:0,5,46	0/0:13,0:10:10.39:0,10,84	0/0:24,0:23:59.92:0,60,523	1/1:1,20:21:54.12:609,54,0	1/1:1,9:10:24.07:277,24,0	0/0:24,0:24:65.47:0,65,580	0/0:6,0:6:18.01:0,18,165	0/0:16,0:16:47.96:0,48,425	0/0:23,0:23:65.91:0,66,584	1/1:0,18:18:45.13:519,45,0	1/1:3,9:12:21.06:243,21,0	1/1:1,19:20:48.01:555,48,0	0/0:22,0:22:57.02:0,57,518	0/0:20,0:20:53.92:0,54,472	0/0:20,0:20:50.96:0,51,453	0/0:12,0:12:26.99:0,27,242	0/0:27,0:27:75:0,75,673	0/0:25,0:25:66:0,66,592	0/0:15,0:15:32.98:0,33,291	1/1:1,14:15:39.06:435,39,0	1/1:1,9:10:24.07:277,24,0	1/1:3,15:18:36.11:415,36,0	0/0:16,0:16:47.95:0,48,429	0/0:23,0:23:69:0,69,619	0/0:23,0:23:63:0,63,567	0/0:7,0:7:18.01:0,18,164
chr10	95081295	.	GTC	G	1756.81	PASS	AB=0.952;AC=29;AF=0.518;AN=56;BaseQRankSum=1.991;DP=318;FS=0.000;HRun=0;HaplotypeScore=57.2761;InbreedingCoeff=0.5733;MQ=54.14;MQ0=20;MQRankSum=4.664;QD=11.12;ReadPosRankSum=-0.092;VQSLOD=3.1500;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:34.97:35,0,113	1/1:1,4:5:3.01:40,3,0	0/0:21,0:7:11.24:0,11,102	0/0:45,0:16:18.80:0,19,185	0/1:5,1:6:0.01:0,0,0	0/0:8,0:8:2.92:0,3,8	1/1:11,0:11:19.81:183,20,0	0/0:18,0:16:30.62:0,31,219	1/1:1,9:10:3.01:40,3,0	1/1:0,8:8:23.90:208,24,0	1/1:1,2:2:3.01:40,3,0	0/0:8,0:8:0.24:0,0,30	0/1:2,0:2:3.12:6,0,3	0/0:5,0:5:5.99:0,6,58	1/1:1,14:14:20.86:279,21,0	1/1:2,11:13:23.96:281,24,0	0/0:17,0:17:20.05:0,20,538	0/0:13,0:13:39.04:0,39,557	1/1:2,4:5:12.01:129,12,0	1/1:1,2:3:3.01:40,3,0	1/1:3,20:22:11.97:137,12,0	0/0:4,0:4:2.68:0,3,11	0/0:3,0:3:2.98:0,3,22	0/0:16,0:15:3.27:0,3,25	1/1:0,8:8:9.03:120,9,0	1/1:3,7:10:23.92:202,24,0	1/1:1,11:10:15.05:199,15,0	0/0:1,0:1:2.97:0,3,20
chr10	95081301	.	CTCTG	C	415.88	PASS	AB=0.965;AC=8;AF=0.143;AN=56;BaseQRankSum=-3.033;DP=312;FS=0.000;HRun=0;HaplotypeScore=68.9129;InbreedingCoeff=0.2221;MQ=54.65;MQ0=17;MQRankSum=2.073;QD=5.78;ReadPosRankSum=-2.487;VQSLOD=1.2059;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:17.64:0,18,243	0/0:4,0:4:2.04:0,2,6	0/0:16,0:5:11.24:0,11,102	0/0:37,0:12:19.39:0,19,190	0/0:1,5:6:0:0,0,0	0/0:8,0:8:4.83:0,5,18	0/1:9,0:10:0.88:162,0,1	0/0:19,0:17:24.76:0,25,221	0/0:10,0:11:0.15:0,0,0	1/1:8,0:8:17.30:162,17,0	0/0:4,0:3:2.04:0,2,6	0/0:2,0:8:4.10:0,4,136	0/1:1,0:2:4.95:5,0,29	0/0:7,0:7:9.02:0,9,137	0/0:17,0:16:19.55:0,20,87	0/1:13,1:14:37.68:54,0,38	0/0:17,0:17:47.93:0,48,957	0/0:15,0:15:44.98:0,45,906	0/1:6,0:5:1.21:39,0,1	0/0:3,0:3:2.04:0,2,6	0/1:22,1:22:8.04:9,0,8	0/0:6,0:6:3.01:0,3,38	0/0:3,0:3:3.01:0,3,49	0/0:16,0:15:11.67:0,12,110	0/0:8,0:8:6.11:0,6,17	0/1:8,1:9:22.40:111,0,22	0/0:11,0:9:10.18:0,10,28	0/0:1,0:1:2.97:0,3,20
chr10	95081303	.	CTG	C	691.57	PASS	AB=0.976;AC=28;AF=0.519;AN=54;BaseQRankSum=2.621;DP=326;FS=3.166;HRun=0;HaplotypeScore=66.1972;InbreedingCoeff=0.3221;MQ=52.55;MQ0=17;MQRankSum=3.419;QD=3.09;ReadPosRankSum=0.787;VQSLOD=1.7849;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,12:23:26.91:282,27,0	1/1:4,0:4:2.88:15,3,0	0/0:15,0:5:2.94:0,3,18	0/1:36,0:11:1.60:2,0,3	0/1:6,0:6:0:0,0,0	0/0:10,0:10:4.87:0,5,33	0/0:13,0:13:2.52:0,3,24	1/1:18,0:17:2.84:14,3,0	1/1:11,0:11:2.72:15,3,0	1/1:8,0:8:2.68:11,3,0	1/1:4,0:3:2.88:15,3,0	0/0:9,0:9:14.04:0,14,128	0/0:5,0:5:5.99:0,6,49	0/0:7,0:7:8.93:0,9,85	0/1:17,0:16:23.85:86,0,24	0/1:14,0:14:23.69:83,0,24	0/1:15,3:18:61.45:61,0,392	0/0:15,0:15:33.01:0,33,451	0/1:7,0:6:15.38:15,0,18	1/1:3,0:3:2.88:15,3,0	1/1:27,0:26:14.71:98,15,0	0/0:6,0:6:3.01:0,3,35	0/0:5,0:5:6.01:0,6,68	0/0:16,0:15:12:0,12,120	1/1:8,0:8:8.56:43,9,0	1/1:8,0:8:2.93:13,3,0	1/1:11,0:9:14.59:85,15,0	./.
chr10	95082945	.	T	TAAA	2516.37	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.053;DP=596;FS=2.998;HRun=1;HaplotypeScore=77.5941;InbreedingCoeff=0.9678;MQ=76.88;MQ0=0;MQRankSum=-6.230;QD=62.91;ReadPosRankSum=-4.061;VQSLOD=2.6935;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39.13:0,39,685	0/0:8,0:8:24.08:0,24,423	0/0:14,0:14:42.11:0,42,662	0/0:12,0:12:36.04:0,36,574	0/0:35,0:35:99:0,105,1848	0/0:17,0:17:51.16:0,51,862	0/0:18,0:18:54.15:0,54,896	1/1:7,29:37:99:2418,105,0	0/0:23,0:23:69.24:0,69,1213	0/0:27,0:27:78.27:0,78,1375	0/0:33,0:33:99:0,99,1718	0/0:16,0:16:42.13:0,42,713	0/0:22,0:22:66.21:0,66,1134	0/0:18,0:18:54.18:0,54,944	0/0:23,0:23:69.24:0,69,1217	0/0:15,0:15:45.15:0,45,794	0/0:15,0:15:45.15:0,45,793	0/0:11,0:11:30.10:0,30,529	0/0:24,0:23:66.21:0,66,1135	0/0:32,0:32:90.29:0,90,1551	0/0:30,0:30:87.28:0,87,1506	0/0:25,0:25:72.22:0,72,1208	0/0:26,0:26:72.20:0,72,1179	0/0:15,0:15:45.15:0,45,794	0/0:23,0:23:66.20:0,66,1135	0/0:25,0:25:69.24:0,69,1208	0/0:35,0:35:99:0,102,1799	1/1:0,3:3:9.03:213,9,0
chr10	95088710	.	A	AT	974.13	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.409;DP=535;FS=9.688;HRun=8;HaplotypeScore=54.6453;InbreedingCoeff=0.9855;MQ=65.42;MQ0=1;MQRankSum=-4.886;QD=23.76;ReadPosRankSum=-2.820;VQSLOD=2.8110;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.03:0,78,714	0/0:8,0:8:24.01:0,24,219	0/0:16,0:13:31.02:0,31,254	0/0:14,0:8:17.96:0,18,151	0/0:27,0:27:66.03:0,66,604	0/0:22,0:22:57.03:0,57,522	0/0:6,0:7:17.04:0,17,143	1/1:5,22:24:57.64:656,58,0	0/0:16,0:16:42.01:0,42,380	0/0:28,0:28:72.03:0,72,659	0/0:17,0:17:48.02:0,48,439	0/0:12,0:12:23.99:0,24,219	0/0:11,0:11:27:0,27,246	0/0:15,0:15:45.01:0,45,407	0/0:18,0:18:48:0,48,434	0/0:15,0:15:33.01:0,33,302	0/0:25,0:25:54.02:0,54,494	0/0:21,0:21:49.83:0,50,444	0/0:9,0:8:27.01:0,27,244	0/0:29,0:29:81.04:0,81,741	0/0:20,1:21:22.41:0,22,459	0/0:15,0:15:36.02:0,36,329	0/0:21,0:21:63.03:0,63,576	0/0:17,0:17:47.98:0,48,427	0/0:16,0:16:42:0,42,378	0/0:34,0:34:93.02:0,93,846	0/0:29,0:29:84.05:0,84,769	1/1:1,13:14:39.10:440,39,0
chr10	95089497	.	CT	C	1667.84	PASS	AB=0.843;AC=19;AF=0.339;AN=56;BaseQRankSum=-1.364;DP=408;FS=1.526;HRun=12;HaplotypeScore=54.4609;InbreedingCoeff=0.6879;MQ=75.35;MQ0=0;MQRankSum=-1.833;QD=10.49;ReadPosRankSum=2.391;VQSLOD=2.9645;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,3:14:20.27:20,0,205	1/1:0,9:9:20.92:163,21,0	0/1:10,1:10:2.30:2,0,124	0/0:11,0:11:0.17:0,0,36	1/1:2,23:25:62.19:467,62,0	0/0:13,1:14:18.85:0,19,373	0/0:7,0:8:11.18:0,11,146	1/1:6,15:21:11.32:267,11,0	1/1:1,9:10:17.93:139,18,0	0/0:7,0:24:51.79:0,52,311	0/0:4,0:17:35.45:0,35,179	0/0:10,0:10:5.69:0,6,184	0/1:8,2:10:25.47:25,0,111	0/0:14,2:16:12.82:0,13,293	1/1:1,10:11:26.89:209,27,0	1/1:9,11:20:5.37:225,5,0	0/0:15,0:15:18.04:0,18,182	0/0:14,0:14:30.02:0,30,291	0/0:2,0:13:34.81:0,35,216	0/0:6,0:26:57.60:0,58,331	0/0:2,0:10:17.21:0,17,102	0/0:3,0:3:9.02:0,9,91	0/0:18,2:20:27.86:0,28,459	0/0:8,0:8:21:0,21,203	1/1:5,11:16:20.17:161,20,0	0/0:3,0:13:28.94:0,29,175	0/0:8,0:26:37.21:0,37,207	1/1:3,9:12:23.90:186,24,0
chr10	95090049	.	CA	C	1039.77	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=7.866;DP=545;FS=0.587;HRun=8;HaplotypeScore=54.2243;InbreedingCoeff=0.7266;MQ=71.62;MQ0=0;MQRankSum=-1.908;QD=17.93;ReadPosRankSum=-3.363;VQSLOD=2.6773;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.17:0,69,816	0/0:12,1:13:1.12:0,1,297	0/1:13,0:12:6.24:6,0,225	0/0:9,0:9:22.80:0,23,229	0/0:23,0:23:66.18:0,66,775	0/0:19,0:19:51.16:0,51,616	0/0:11,0:11:30.09:0,30,362	1/1:4,29:33:87.13:840,87,0	0/0:14,0:14:39.11:0,39,460	0/0:21,0:21:60.18:0,60,721	0/0:23,0:23:63.19:0,63,761	0/0:21,0:21:63.16:0,63,737	0/0:18,0:18:51.16:0,51,616	0/0:15,0:15:42.10:0,42,492	0/0:27,0:27:81.21:0,81,951	0/0:12,0:12:36.11:0,36,435	0/0:12,0:12:36.07:0,36,418	0/0:5,0:5:12.03:0,12,134	0/0:21,0:21:50.63:0,51,577	0/0:30,0:30:78.23:0,78,933	0/0:11,0:11:24.07:0,24,290	0/0:22,0:22:60.18:0,60,721	0/0:31,0:31:87.25:0,87,1039	0/0:12,0:12:32.97:0,33,398	0/0:31,0:30:81.25:0,81,979	0/0:31,0:31:49.86:0,50,878	0/0:30,0:29:81.25:0,81,976	1/1:0,12:12:33.05:319,33,0
chr10	95091133	.	CA	C	775.15	PASS	AB=0.741;AC=16;AF=0.286;AN=56;BaseQRankSum=3.845;DP=500;FS=16.527;HRun=14;HaplotypeScore=72.7186;InbreedingCoeff=0.3562;MQ=70.88;MQ0=3;MQRankSum=1.754;QD=4.12;ReadPosRankSum=6.257;VQSLOD=-0.1511;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,2:9:1.02:1,0,120	0/0:5,0:6:14.84:0,15,122	0/0:15,0:8:7.54:0,8,52	0/0:14,0:13:5.08:0,5,54	0/0:32,1:34:36.43:0,36,455	0/1:6,9:16:29.57:103,0,30	1/1:5,10:19:37.81:229,38,0	0/0:5,0:26:22.96:0,23,120	0/0:13,0:14:19.60:0,20,181	0/1:17,2:19:5.14:5,0,237	0/0:17,1:20:24.10:0,24,323	1/1:8,4:13:13.78:88,14,0	1/1:12,5:18:16.67:108,17,0	1/1:11,5:16:9.35:78,9,0	0/0:19,0:19:48.79:0,49,408	0/0:16,1:17:16.98:0,17,279	0/0:15,0:17:31.26:0,31,320	0/0:15,1:16:2.64:0,3,147	0/0:21,0:21:40.41:0,40,331	0/0:25,2:28:15.72:0,16,436	0/1:6,1:7:2.11:14,0,2	0/1:5,7:12:10.13:85,0,10	0/1:11,12:24:29.72:86,0,30	0/1:3,11:14:1.07:138,0,1	0/0:26,2:29:23.98:0,24,521	0/1:18,1:21:8.42:8,0,240	0/0:24,0:25:52.36:0,52,418	0/0:1,0:10:1.39:0,1,11
chr10	95091781	.	GT	G	1564.11	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.197;DP=572;FS=4.484;HRun=3;HaplotypeScore=53.9965;InbreedingCoeff=0.9976;MQ=56.46;MQ0=5;MQRankSum=2.356;QD=31.92;ReadPosRankSum=-3.383;VQSLOD=2.2427;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.18:0,54,769	0/0:7,0:7:21.07:0,21,302	0/0:24,0:15:42.03:0,42,530	0/0:22,0:16:36.09:0,36,496	0/0:25,0:25:75.25:0,75,1079	0/0:32,0:32:96.31:0,96,1360	0/0:18,0:18:54.18:0,54,778	1/1:2,36:37:99:1277,105,0	0/0:23,0:23:69.23:0,69,994	0/0:21,0:21:63.21:0,63,907	0/0:20,0:20:60.19:0,60,839	0/0:24,0:24:72.24:0,72,1037	0/0:30,0:30:90.29:0,90,1279	0/0:15,0:15:45.14:0,45,633	0/0:24,0:24:69.23:0,69,994	0/0:16,0:16:45.15:0,45,648	0/0:18,0:18:54.18:0,54,777	0/0:21,0:21:60.20:0,60,862	0/0:22,0:21:57.16:0,57,799	0/0:20,0:20:57.19:0,57,821	0/0:19,0:19:57.19:0,57,820	0/0:16,0:16:48.16:0,48,691	0/0:14,0:14:39.13:0,39,557	0/0:18,0:18:54.18:0,54,778	0/0:15,0:15:42.13:0,42,587	0/0:17,0:17:51.17:0,51,734	0/0:21,0:21:60.19:0,60,847	1/1:0,11:11:33.10:409,33,0
chr10	95093328	.	CA	C	4898.98	PASS	AB=0.598;AC=28;AF=0.500;AN=56;BaseQRankSum=10.277;DP=542;FS=14.778;HRun=11;HaplotypeScore=56.6395;InbreedingCoeff=0.8098;MQ=65.85;MQ0=2;MQRankSum=0.500;QD=17.69;ReadPosRankSum=2.056;VQSLOD=4.5550;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,2:46:74.02:0,74,1198	1/1:1,6:7:17.97:148,18,0	0/0:15,0:13:9.01:0,9,89	0/0:5,1:4:6:0,6,56	1/1:0,11:11:26.95:221,27,0	0/0:10,1:12:11.28:0,11,309	0/0:17,0:17:48.08:0,48,490	1/1:4,17:21:37.95:299,38,0	1/1:2,18:21:18.52:322,19,0	1/1:7,22:29:36.90:506,37,0	1/1:3,11:16:32.94:271,33,0	0/0:14,1:15:17.44:0,17,377	0/0:19,0:19:51.06:0,51,516	0/0:18,2:20:5.08:0,5,395	1/1:5,16:22:46.97:375,47,0	1/1:1,14:15:29.96:246,30,0	0/0:23,1:24:38.49:0,38,600	0/0:24,0:24:69.15:0,69,727	0/1:5,9:13:34.03:164,0,34	1/1:4,21:25:58.94:474,59,0	0/1:6,14:20:16.03:297,0,16	0/0:13,0:13:32.95:0,33,335	0/0:22,0:26:59.61:0,60,570	0/0:26,0:26:65.93:0,66,658	1/1:3,16:19:41.94:345,42,0	1/1:0,24:24:71.92:591,72,0	1/1:4,21:25:59.80:492,60,0	1/1:0,6:6:17.98:148,18,0
chr10	95094410	.	CA	C	291.95	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=6.476;DP=556;FS=0.796;HRun=9;HaplotypeScore=63.9126;InbreedingCoeff=0.9935;MQ=65.82;MQ0=4;MQRankSum=-4.046;QD=10.07;ReadPosRankSum=-3.614;VQSLOD=1.5471;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:42.12:0,42,482	0/0:9,0:9:21.06:0,21,242	0/0:29,0:15:33.03:0,33,358	0/0:28,0:18:33.02:0,33,347	0/0:34,1:35:71.77:0,72,1033	0/0:16,0:16:30.08:0,30,338	0/0:13,0:13:33.06:0,33,366	1/1:22,7:26:57.68:387,58,0	0/0:16,0:16:36.09:0,36,404	0/0:31,0:31:87.26:0,87,1000	0/0:22,0:21:60.18:0,60,693	0/0:13,0:13:33.10:0,33,380	0/0:13,0:13:36.11:0,36,415	0/0:21,0:21:57.17:0,57,658	0/0:16,0:16:42.12:0,42,484	0/0:12,0:12:36.11:0,36,415	0/0:25,0:25:69.19:0,69,783	0/0:17,0:17:37.81:0,38,436	0/0:30,0:31:68.79:0,69,759	0/0:19,0:19:48.13:0,48,542	0/0:14,0:14:36.05:0,36,397	0/0:13,0:13:35.78:0,36,392	0/0:25,1:27:41.57:0,42,714	0/0:14,0:14:36.11:0,36,415	0/0:21,0:21:57.17:0,57,658	0/0:25,1:26:44.74:0,45,760	0/0:28,0:29:84.08:0,84,947	./.
chr10	95094419	.	AC	A	352.01	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=7.466;DP=539;FS=0.820;HRun=2;HaplotypeScore=60.7088;InbreedingCoeff=0.9933;MQ=64.20;MQ0=3;MQRankSum=-3.692;QD=14.67;ReadPosRankSum=-2.204;VQSLOD=2.4254;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.07:0,54,671	0/0:9,0:9:27.06:0,27,340	0/0:28,0:15:32.26:0,32,441	0/0:24,0:15:24.21:0,24,372	0/0:35,0:35:99:0,102,1328	0/0:12,0:12:33.09:0,33,440	0/0:12,0:12:33.10:0,33,440	1/1:14,10:21:23.61:445,24,0	0/0:13,0:13:39.10:0,39,507	0/0:34,0:34:99:0,102,1307	0/0:23,0:22:66.19:0,66,868	0/0:13,0:13:39.11:0,39,508	0/0:14,0:14:42.11:0,42,540	0/0:20,0:20:60.17:0,60,798	0/0:18,0:18:54.13:0,54,684	0/0:13,0:13:39.12:0,39,525	0/0:26,0:26:72.16:0,72,956	0/0:20,0:20:53.64:0,54,636	0/0:26,0:26:77.74:0,78,889	0/0:18,0:18:54.06:0,54,671	0/0:13,0:13:33.11:0,33,455	0/0:15,0:15:45.08:0,45,539	0/0:23,0:23:65.73:0,66,890	0/0:13,0:13:36.12:0,36,498	0/0:20,0:20:60.19:0,60,817	0/0:25,0:25:71.22:0,71,967	0/0:29,0:29:87.17:0,87,1108	./.
chr10	95094420	.	C	CAA	601.73	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.696;DP=551;FS=0.000;HRun=9;HaplotypeScore=73.4329;InbreedingCoeff=0.9422;MQ=64.95;MQ0=3;MQRankSum=-6.173;QD=20.06;ReadPosRankSum=-2.931;VQSLOD=1.8162;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.17:0,54,823	0/0:9,0:9:27.09:0,27,426	0/0:29,0:16:38.52:0,39,505	0/0:24,1:16:37.22:0,37,428	0/0:35,0:35:99:0,102,1573	0/0:13,0:13:33.11:0,33,530	0/0:11,0:11:33.10:0,33,498	1/1:24,4:25:33.76:636,34,0	0/0:13,0:13:39.13:0,39,611	0/0:34,0:34:99:0,102,1601	0/0:23,0:22:66.22:0,66,1026	0/0:13,0:13:39.13:0,39,623	0/0:14,0:14:42.14:0,42,662	0/0:21,0:21:60.19:0,60,936	0/0:18,0:18:54.14:0,54,806	0/0:13,0:13:39.12:0,39,604	0/0:26,0:26:72.18:0,72,1114	0/0:20,0:20:53.67:0,54,740	0/0:26,0:26:71.30:0,71,996	0/0:18,0:18:54.09:0,54,801	0/0:13,0:13:33.11:0,33,505	0/0:15,0:15:45.10:0,45,640	0/0:24,0:24:69.21:0,69,1048	0/0:13,0:13:36.12:0,36,535	0/0:20,0:20:60.20:0,60,932	0/0:27,0:27:75.25:0,75,1136	0/0:29,0:29:87.21:0,87,1322	1/1:2,0:2:6.02:78,6,0
chr10	95094490	.	GA	G	1100.38	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.158;DP=572;FS=1.983;HRun=8;HaplotypeScore=56.4591;InbreedingCoeff=0.9963;MQ=81.13;MQ0=0;MQRankSum=-0.612;QD=24.45;ReadPosRankSum=-4.303;VQSLOD=2.5217;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.20:0,66,797	0/0:9,0:9:21.05:0,21,242	0/0:17,0:16:35.77:0,36,388	0/0:21,0:21:39.10:0,39,441	0/0:35,0:35:99:0,102,1232	0/0:27,0:27:81.25:0,81,979	0/0:11,0:10:30.09:0,30,362	1/1:1,30:31:90.09:846,90,0	0/0:18,0:18:54.17:0,54,652	0/0:31,0:31:87.27:0,87,1046	0/0:25,0:26:69.08:0,69,811	0/0:28,0:28:78.24:0,78,942	0/0:19,0:19:54.17:0,54,652	0/0:19,0:19:51.16:0,51,616	0/0:22,0:22:66.20:0,66,797	0/0:15,0:15:42.13:0,42,507	0/0:16,0:16:45.14:0,45,544	0/0:13,0:13:39.12:0,39,471	0/0:15,0:15:42.10:0,42,486	0/0:35,0:35:96.29:0,96,1159	0/0:14,0:14:39.12:0,39,471	0/0:19,0:19:57.17:0,57,688	0/0:14,0:14:39.11:0,39,460	0/0:9,0:9:24.06:0,24,278	0/0:24,0:24:72.22:0,72,869	0/0:24,0:24:66.19:0,66,788	0/0:23,0:23:60.18:0,60,725	1/1:0,14:14:39.06:376,39,0
chr10	95098207	.	TGGGGGA	T	462.02	PASS	AB=1.000;AC=5;AF=0.104;AN=48;BaseQRankSum=1.007;DP=107;FS=13.819;HRun=0;HaplotypeScore=33.1847;InbreedingCoeff=0.3085;MQ=113.00;MQ0=3;MQRankSum=-2.412;QD=23.10;ReadPosRankSum=0.296;VQSLOD=1.0048;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:5:0.90:1,0,20	0/0:1,0:1:3.01:0,3,101	0/0:18,0:12:35.96:0,36,436	0/0:22,0:15:21.99:0,22,306	0/0:3,0:3:9.02:0,9,219	./.	0/0:3,0:3:3.01:0,3,87	1/1:2,5:7:15.51:296,16,0	./.	0/0:1,0:1:2.99:0,3,23	./.	0/0:1,0:1:3.01:0,3,48	0/0:2,0:2:6.02:0,6,194	0/0:2,0:2:6.02:0,6,193	0/0:1,0:1:3:0,3,26	0/0:3,0:3:6.02:0,6,147	0/0:4,0:4:6.02:0,6,203	0/0:2,0:2:5.61:0,6,67	0/0:1,0:1:3:0,3,28	0/0:3,0:3:9.03:0,9,295	0/0:3,0:3:5.99:0,6,49	0/0:4,0:4:9.03:0,9,245	0/0:1,0:1:3.01:0,3,93	0/0:4,0:4:5.98:0,6,74	./.	0/0:3,0:3:6.02:0,6,203	0/0:4,0:4:12.03:0,12,219	1/1:1,7:8:12.04:272,12,0
chr10	95098707	.	GT	G	2471.93	PASS	AB=0.724;AC=39;AF=0.696;AN=56;BaseQRankSum=4.483;DP=524;FS=1.868;HRun=16;HaplotypeScore=63.3473;InbreedingCoeff=0.0317;MQ=69.48;MQ0=4;MQRankSum=1.419;QD=5.22;ReadPosRankSum=4.423;VQSLOD=2.1919;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:38.75:0,39,302	0/1:4,6:10:13.50:42,0,13	0/1:23,0:15:15.45:25,0,15	0/1:15,0:8:5.89:6,0,35	0/1:15,19:36:28.39:174,0,28	1/1:6,8:16:24.54:137,25,0	1/1:2,9:13:2.41:112,2,0	1/1:8,0:19:16.13:47,16,0	1/1:4,6:10:10.77:70,11,0	1/1:12,13:25:32.03:195,32,0	0/1:8,14:25:15.89:135,0,16	0/1:7,6:13:2.77:91,0,3	0/1:10,9:19:26.73:69,0,27	1/1:9,7:17:0.08:91,0,0	1/1:6,10:16:29.35:179,29,0	1/1:8,14:22:18.83:226,19,0	0/0:15,1:16:20.76:0,21,260	0/0:10,0:10:14.96:0,15,122	0/1:12,4:17:39.85:40,0,56	0/1:13,12:27:2.48:102,0,2	1/1:3,8:11:11.01:71,11,0	1/1:8,9:18:0.05:106,0,0	1/1:4,10:16:21.68:120,22,0	1/1:2,9:11:20.56:126,21,0	0/1:9,10:19:25.94:83,0,26	0/1:15,15:31:36.86:129,0,37	1/1:17,17:35:4.35:227,4,0	1/1:1,0:8:12.22:35,12,0
chr10	95100686	.	AC	A	836.93	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.569;DP=498;FS=1.586;HRun=2;HaplotypeScore=46.6260;InbreedingCoeff=0.9734;MQ=80.10;MQ0=0;MQRankSum=-0.398;QD=31.00;ReadPosRankSum=-2.066;VQSLOD=2.7054;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.20:0,63,921	0/0:4,0:4:12.03:0,12,159	0/0:20,0:20:60.05:0,60,774	0/0:10,0:9:15.03:0,15,202	0/0:22,0:22:66.22:0,66,984	0/0:20,0:20:60.15:0,60,844	0/0:10,0:10:27.07:0,27,367	1/1:1,19:20:57.14:686,57,0	0/0:19,0:19:57.17:0,57,807	0/0:18,0:18:54.18:0,54,790	0/0:22,0:22:63.20:0,63,912	0/0:14,0:14:39.13:0,39,580	0/0:17,0:17:51.16:0,51,739	0/0:13,0:13:39.10:0,39,540	0/0:21,0:21:63.19:0,63,918	0/0:15,0:14:45.14:0,45,651	0/0:23,0:23:60.79:0,61,930	0/0:13,0:13:33.51:0,34,394	0/0:12,0:12:36.10:0,36,517	0/0:40,0:40:99:0,120,1752	0/0:24,0:24:69.21:0,69,992	0/0:15,0:15:45.14:0,45,652	0/0:28,0:27:84.27:0,84,1224	0/0:11,0:11:33.09:0,33,452	0/0:18,0:18:54.12:0,54,743	0/0:17,0:17:51.16:0,51,745	0/0:24,0:24:72.24:0,72,1075	1/1:0,7:7:21.07:272,21,0
chr10	95102787	.	A	ATG	2014.44	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.320;DP=629;FS=6.319;HRun=0;HaplotypeScore=73.7736;InbreedingCoeff=0.9671;MQ=90.81;MQ0=0;MQRankSum=-2.107;QD=51.65;ReadPosRankSum=-4.097;VQSLOD=2.9912;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.28:0,90,1352	0/0:7,0:7:21.06:0,21,301	0/0:28,0:28:81.03:0,81,1133	0/0:22,0:22:65.96:0,66,903	0/0:26,0:26:75.25:0,75,1129	0/0:22,0:22:66.21:0,66,991	0/0:26,0:26:75.24:0,75,1128	1/1:8,27:36:99:1955,105,0	0/0:20,0:20:60.20:0,60,918	0/0:23,0:23:69.22:0,69,1036	0/0:26,0:26:72.24:0,72,1101	0/0:25,0:25:72.24:0,72,1099	0/0:24,0:24:72.24:0,72,1098	0/0:15,0:15:45.15:0,45,689	0/0:17,0:17:51.16:0,51,760	0/0:22,0:22:66.22:0,66,1007	0/0:22,0:22:66.18:0,66,985	0/0:18,0:18:51.17:0,51,777	0/0:23,0:23:60.17:0,60,857	0/0:26,0:26:78.19:0,78,1146	0/0:39,0:39:99:0,117,1792	0/0:13,0:13:36.12:0,36,551	0/0:13,0:13:36.12:0,36,551	0/0:29,0:29:87.30:0,87,1330	0/0:17,0:17:51.17:0,51,781	0/0:28,0:27:84.29:0,84,1286	0/0:27,0:27:78.26:0,78,1194	1/1:0,3:3:9.03:174,9,0
chr10	95103970	.	CTG	C	972.55	PASS	AB=0.917;AC=6;AF=0.107;AN=56;BaseQRankSum=7.990;DP=455;FS=9.564;HRun=0;HaplotypeScore=58.8259;InbreedingCoeff=0.6595;MQ=73.68;MQ0=0;MQRankSum=-0.034;QD=13.51;ReadPosRankSum=-1.836;VQSLOD=1.6195;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:30.10:0,30,471	0/0:7,0:7:21.06:0,21,322	0/1:21,1:18:1.30:1,0,439	0/0:23,0:18:37.92:0,38,478	0/0:18,0:18:42.14:0,42,693	0/0:23,0:23:30.77:0,31,925	0/0:7,0:7:15.03:0,15,219	1/1:5,19:24:60.08:704,60,0	0/0:13,0:13:39.12:0,39,614	0/0:21,0:21:54.18:0,54,867	0/0:23,0:23:66.23:0,66,1083	0/0:13,0:13:36.12:0,36,591	0/0:11,0:11:24.08:0,24,396	0/0:14,0:14:33.11:0,33,543	0/0:11,0:11:30.09:0,30,471	0/0:18,0:18:39.13:0,39,638	0/0:21,0:21:28.34:0,28,765	0/1:12,2:14:21.74:22,0,320	0/0:27,0:27:66.19:0,66,1020	0/0:16,0:16:48.16:0,48,793	0/0:13,0:13:33.11:0,33,541	0/0:7,0:7:15.05:0,15,248	0/0:13,0:13:36.12:0,36,595	0/0:3,0:3:9.03:0,9,149	0/0:14,0:14:36.12:0,36,595	0/0:17,0:17:45.15:0,45,742	0/0:35,0:34:90.31:0,90,1471	1/1:0,11:11:30.10:375,30,0
chr10	95104763	.	A	AC	2208.30	PASS	AB=0.685;AC=15;AF=0.268;AN=56;BaseQRankSum=-9.565;DP=559;FS=2.069;HRun=10;HaplotypeScore=73.1020;InbreedingCoeff=0.6216;MQ=68.42;MQ0=0;MQRankSum=0.604;QD=10.99;ReadPosRankSum=-0.506;VQSLOD=3.0444;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:17:37.92:0,38,292	1/1:1,18:19:26.59:268,27,0	0/1:12,0:11:23.64:24,0,55	0/0:15,0:12:12.98:0,13,88	1/1:8,18:26:41.92:405,42,0	0/0:20,0:20:56.87:0,57,458	0/0:19,0:19:47.88:0,48,385	1/1:16,9:26:23.99:233,24,0	1/1:2,23:25:39.10:416,39,0	0/0:21,0:21:53.85:0,54,435	0/0:25,0:25:68.87:0,69,560	0/0:20,0:20:53.42:0,53,427	0/0:24,0:24:63.79:0,64,516	0/0:14,1:15:4.28:0,4,239	0/1:6,9:15:6.60:142,0,7	0/1:8,19:27:0.71:371,0,1	0/0:19,0:19:50.83:0,51,404	0/0:8,0:8:20.97:0,21,172	0/0:13,0:13:32.92:0,33,266	0/0:25,0:25:65.80:0,66,526	0/0:13,0:13:23.90:0,24,187	0/0:17,0:17:35.75:0,36,284	0/1:5,14:19:4.16:171,0,4	0/0:20,0:20:47.90:0,48,392	1/1:4,21:25:27.06:281,27,0	0/0:27,0:29:75.94:0,76,595	0/0:36,2:38:25.91:0,26,605	0/1:3,4:7:12.61:84,0,13
chr10	95106735	.	G	GGTGTGT	516.73	PASS	AB=0.835;AC=19;AF=0.365;AN=52;BaseQRankSum=-0.925;DP=447;FS=2.083;HRun=0;HaplotypeScore=142.6035;InbreedingCoeff=0.2200;MQ=64.54;MQ0=13;MQRankSum=-2.239;QD=2.31;ReadPosRankSum=-1.369;VQSLOD=2.3021;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:26.12:0,26,436	1/1:5,1:6:1.82:5,2,0	./.	./.	0/1:9,7:19:0:0,0,0	0/0:11,0:12:6:0,6,67	1/1:6,0:12:0.89:2,1,0	0/1:28,0:29:3.27:17,0,3	1/1:6,6:14:9.01:136,9,0	0/1:18,0:19:39.84:40,0,40	0/0:9,0:21:13.33:0,13,132	0/0:5,0:10:11.98:0,12,113	0/0:0,0:9:12.04:0,12,167	0/0:4,0:6:2.99:0,3,24	1/1:14,1:21:5.05:166,5,0	1/1:5,5:11:3.01:82,3,0	0/0:24,0:25:22.17:0,22,610	0/0:16,0:21:15.25:0,15,107	0/1:14,0:14:13.35:13,0,42	0/1:18,0:28:44.99:45,0,107	0/0:4,0:6:3.90:0,4,61	0/0:6,0:13:6.02:0,6,84	0/0:4,0:10:9.02:0,9,110	0/0:12,0:13:0.20:0,0,31	1/1:5,8:19:9.03:122,9,0	0/1:7,0:8:13.20:13,0,28	0/1:10,0:15:22.43:22,0,169	0/0:7,0:8:6.02:0,6,84
chr10	95108726	.	GT	G	602.42	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.608;DP=434;FS=1.609;HRun=8;HaplotypeScore=44.6368;InbreedingCoeff=0.8568;MQ=79.57;MQ0=1;MQRankSum=0.413;QD=21.52;ReadPosRankSum=-1.625;VQSLOD=2.9049;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:35.83:0,36,605	0/0:11,0:11:27.08:0,27,326	0/0:20,0:13:9.32:0,9,153	0/0:19,0:13:7.28:0,7,98	0/0:30,0:30:72.22:0,72,869	0/0:20,0:20:51.14:0,51,605	0/0:13,0:13:33.10:0,33,399	1/1:2,14:16:42.07:405,42,0	0/0:10,0:10:24.07:0,24,290	0/0:15,0:15:36.10:0,36,426	0/0:16,0:16:48.15:0,48,578	0/0:14,0:14:27.08:0,27,326	0/0:11,0:11:24.06:0,24,277	0/0:12,0:12:24.07:0,24,290	0/0:7,0:7:21.05:0,21,242	0/0:11,0:11:27.06:0,27,305	0/0:18,0:18:51.10:0,51,571	0/0:12,0:12:33.08:0,33,384	0/0:11,0:11:27.07:0,27,316	0/0:24,0:24:60.18:0,60,724	0/0:6,0:6:9.02:0,9,97	0/0:9,0:9:27.03:0,27,305	0/0:18,0:18:45.14:0,45,543	0/0:2,0:2:6.02:0,6,72	0/0:26,0:26:78.22:0,78,922	0/0:22,0:21:57.17:0,57,688	0/0:27,0:27:81.23:0,81,955	1/1:1,11:12:33.05:319,33,0
chr10	95108929	.	C	CG	724.48	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.527;DP=528;FS=9.777;HRun=6;HaplotypeScore=57.9049;InbreedingCoeff=0.9344;MQ=76.41;MQ0=0;MQRankSum=-0.424;QD=25.87;ReadPosRankSum=-3.739;VQSLOD=1.7008;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,123,1247	0/0:6,0:6:18.04:0,18,183	0/0:14,0:14:24.28:0,24,322	0/0:21,0:20:26.26:0,26,312	0/0:13,0:13:36.05:0,36,353	0/0:20,0:20:57.10:0,57,573	0/0:20,0:20:51.11:0,51,519	1/1:4,21:25:63.16:761,63,0	0/0:21,0:21:48.07:0,48,480	0/0:14,0:14:24.04:0,24,245	0/0:15,0:15:36.08:0,36,366	0/0:16,0:16:45.10:0,45,458	0/0:16,0:16:36.06:0,36,356	0/0:17,0:17:42.06:0,42,418	0/0:19,0:19:42.08:0,42,428	0/0:18,0:18:51.12:0,51,520	0/0:27,0:27:81.18:0,81,826	0/0:22,0:22:54.12:0,54,550	0/0:17,0:17:51.05:0,51,507	0/0:14,0:14:39.09:0,39,397	0/0:30,0:30:78.17:0,78,795	0/0:18,0:18:48.10:0,48,489	0/0:8,0:8:21.05:0,21,213	0/0:31,0:31:84.18:0,84,856	0/0:20,0:20:57.12:0,57,580	0/0:17,0:17:42.08:0,42,423	0/0:17,0:17:48.11:0,48,489	1/1:1,2:3:6.02:75,6,0
chr10	95111710	.	TA	T	4540.61	PASS	AB=0.766;AC=47;AF=0.839;AN=56;BaseQRankSum=3.922;DP=434;FS=43.230;HRun=13;HaplotypeScore=49.0297;InbreedingCoeff=0.5181;MQ=53.11;MQ0=8;MQRankSum=1.338;QD=11.67;ReadPosRankSum=0.786;VQSLOD=1.2558;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,25:34:42.21:474,42,0	1/1:3,6:9:20.88:153,21,0	0/0:15,0:1:2.98:0,3,21	0/1:12,1:4:13.14:13,0,26	1/1:2,17:19:9.60:233,10,0	0/1:6,5:11:14.27:73,0,14	1/1:6,6:11:11.90:87,12,0	1/1:5,0:11:16.28:47,16,0	1/1:3,7:9:14.91:109,15,0	1/1:9,17:25:50.69:372,51,0	1/1:6,17:22:5.58:192,6,0	1/1:4,7:11:14.86:109,15,0	1/1:3,12:15:35.77:263,36,0	1/1:7,11:18:26.69:197,27,0	1/1:7,11:17:20.81:153,21,0	1/1:5,4:11:18.97:121,19,0	0/0:19,0:18:41.08:0,41,423	0/0:10,0:10:18.03:0,18,175	0/1:8,6:11:3.30:132,0,3	1/1:6,15:21:38.72:284,39,0	1/1:3,6:9:20.87:153,21,0	1/1:2,5:7:14.89:109,15,0	1/1:3,12:14:20.86:153,21,0	1/1:4,12:16:38.77:284,39,0	1/1:2,10:12:26.82:197,27,0	1/1:9,15:24:44.62:328,45,0	1/1:4,12:17:37.74:268,38,0	1/1:0,0:9:7.13:36,7,0
chr10	95112525	.	A	AT	1337.65	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.714;DP=421;FS=1.323;HRun=6;HaplotypeScore=38.8629;InbreedingCoeff=0.8923;MQ=66.27;MQ0=0;MQRankSum=-1.796;QD=29.73;ReadPosRankSum=-3.595;VQSLOD=2.4048;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.14:0,60,612	0/0:6,0:6:15:0,15,144	0/0:10,0:7:9:0,9,81	0/0:5,0:4:12.03:0,12,121	0/0:17,0:17:51.12:0,51,520	0/0:10,0:10:30.07:0,30,306	0/0:8,0:8:24.05:0,24,245	1/1:4,31:35:90.28:1119,90,0	0/0:14,0:14:36.08:0,36,367	0/0:25,0:25:66.14:0,66,668	0/0:25,0:25:66.15:0,66,673	0/0:13,0:13:36.08:0,36,367	0/0:6,0:6:18.03:0,18,177	0/0:9,0:9:24.05:0,24,245	0/0:15,0:15:42.09:0,42,428	0/0:12,0:12:36.07:0,36,361	0/0:17,0:17:36.04:0,36,367	0/0:21,0:21:57.13:0,57,581	0/0:16,0:16:45.10:0,45,459	0/0:24,0:24:72.16:0,72,734	0/0:9,0:9:27.06:0,27,275	0/0:2,0:2:6.01:0,6,61	0/0:11,0:11:30.07:0,30,306	0/0:8,0:8:21.05:0,21,214	0/0:16,0:16:45.08:0,45,451	0/0:30,0:30:78.17:0,78,796	0/0:25,0:25:69.14:0,69,697	1/1:0,10:10:27.09:340,27,0
chr10	95117509	.	TA	T	702.47	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.131;DP=750;FS=2.981;HRun=1;HaplotypeScore=66.7575;InbreedingCoeff=0.9849;MQ=82.70;MQ0=0;MQRankSum=-3.215;QD=29.27;ReadPosRankSum=0.270;VQSLOD=3.3726;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.20:0,60,958	0/0:19,0:19:57.19:0,57,911	0/0:28,0:28:78.23:0,78,1169	0/0:22,0:22:49.48:0,49,876	0/0:43,0:43:99:0,129,2015	0/0:29,0:29:87.30:0,87,1390	0/0:25,0:25:75.22:0,75,1148	0/0:33,0:33:96.33:0,96,1534	0/0:25,0:25:75.22:0,75,1151	0/0:39,0:39:99:0,117,1843	0/0:20,0:20:60.19:0,60,932	0/0:20,0:20:60.20:0,60,959	0/0:33,0:33:99:0,99,1554	0/0:23,0:23:69.17:0,69,1072	0/0:34,0:33:99:0,102,1630	1/1:1,23:24:15.31:791,15,0	0/0:28,0:28:83.46:0,83,1275	0/0:19,0:19:57.19:0,57,903	0/0:29,0:29:87.29:0,87,1368	0/0:35,0:35:99:0,105,1677	0/0:21,0:21:63.20:0,63,984	0/0:23,0:23:69.20:0,69,1054	0/0:29,0:29:87.30:0,87,1386	0/0:20,0:20:60.18:0,60,934	0/0:39,0:39:99:0,117,1845	0/0:31,0:31:93.32:0,93,1487	0/0:21,0:21:63.19:0,63,980	0/0:17,0:17:51.17:0,51,815
chr10	95118349	.	A	AAC	268.85	PASS	AB=0.900;AC=4;AF=0.074;AN=54;BaseQRankSum=-0.477;DP=163;FS=21.649;HRun=0;HaplotypeScore=24.6161;InbreedingCoeff=0.2062;MQ=74.69;MQ0=3;MQRankSum=0.539;QD=8.96;ReadPosRankSum=-3.057;VQSLOD=0.9020;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:12.04:0,12,148	0/0:4,0:4:6.02:0,6,74	0/1:15,0:5:2.19:2,0,32	0/0:13,0:9:7.31:0,7,80	0/0:8,0:8:14.99:0,15,157	0/0:6,0:6:9.03:0,9,111	0/0:5,0:5:9.03:0,9,111	1/1:5,6:11:21.07:334,21,0	0/0:5,0:5:9.01:0,9,89	0/0:6,0:6:15.04:0,15,167	0/0:4,0:5:8.85:0,9,78	0/0:4,0:4:9.02:0,9,100	0/0:4,0:4:3.01:0,3,37	0/0:6,0:6:15:0,15,167	0/0:5,0:5:9.02:0,9,100	0/0:4,0:4:9.02:0,9,98	0/0:4,0:4:9.03:0,9,111	0/0:7,0:7:21.06:0,21,247	0/1:3,1:4:36.90:37,0,89	0/0:4,0:4:6.02:0,6,74	0/0:10,0:10:15.05:0,15,184	0/0:3,0:3:6.02:0,6,74	0/0:5,0:5:6.02:0,6,74	0/0:4,0:4:9.03:0,9,111	0/0:6,0:6:12.03:0,12,138	0/0:2,0:2:6.02:0,6,74	0/0:5,0:5:6.02:0,6,72	./.
chr10	95118887	.	C	CT	2793.34	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.531;DP=582;FS=0.427;HRun=8;HaplotypeScore=59.1380;InbreedingCoeff=0.9886;MQ=67.53;MQ0=2;MQRankSum=0.852;QD=27.93;ReadPosRankSum=0.038;VQSLOD=3.9259;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:96.04:0,96,879	0/0:14,0:14:33.02:0,33,302	0/0:13,0:11:29.68:0,30,253	0/0:14,0:12:23.04:0,23,197	0/0:26,1:27:43.42:0,43,652	0/0:28,0:28:72.04:0,72,659	0/0:9,0:9:27.01:0,27,247	0/0:22,0:22:44.62:0,45,411	0/0:22,0:22:63.03:0,63,576	0/0:23,0:23:54.02:0,54,494	0/0:19,0:19:54.01:0,54,489	0/0:19,0:19:45:0,45,407	0/0:14,0:14:42.02:0,42,384	0/0:21,0:21:54.03:0,54,494	0/0:24,0:24:66.02:0,66,599	0/0:17,0:17:15.48:0,15,306	0/0:24,0:24:69.04:0,69,630	0/0:6,0:6:15.01:0,15,137	1/1:4,25:29:78.19:876,78,0	1/1:5,27:32:81.24:935,81,0	1/1:3,8:11:21.06:242,21,0	0/0:24,0:24:69.04:0,69,631	0/0:25,0:25:66.03:0,66,604	0/0:15,0:15:45.02:0,45,412	0/0:28,0:28:78.04:0,78,714	0/0:25,0:25:72.04:0,72,659	1/1:1,27:28:78.23:900,78,0	0/0:11,0:11:24:0,24,220
chr10	95119895	.	C	CTCCATCTATCT	452.66	PASS	AB=0.782;AC=4;AF=0.071;AN=56;BaseQRankSum=4.537;DP=594;FS=0.884;HRun=0;HaplotypeScore=196.9287;InbreedingCoeff=0.4360;MQ=57.91;MQ0=2;MQRankSum=-2.024;QD=5.14;ReadPosRankSum=-0.810;VQSLOD=2.7013;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:74.93:0,75,1699	0/0:10,0:11:24.08:0,24,806	0/0:21,0:15:42.13:0,42,665	0/0:13,0:8:22.32:0,22,342	0/0:29,0:29:27.27:0,27,1087	0/0:21,0:21:57.10:0,57,1130	0/0:11,0:11:33.09:0,33,564	0/0:32,0:29:86.30:0,86,671	0/0:27,0:27:75.24:0,75,2091	0/0:34,0:34:99:0,99,2587	0/0:11,0:26:51.17:0,51,1249	0/0:17,0:17:42.14:0,42,884	0/0:22,0:22:63.20:0,63,1761	0/0:17,0:26:56.76:0,57,1098	0/0:26,0:26:78.26:0,78,2041	0/0:19,0:19:54.13:0,54,1048	0/0:13,0:28:36.80:0,37,544	0/0:7,0:7:21.04:0,21,361	0/0:15,0:15:15.86:0,16,332	0/1:30,0:30:88.31:88,0,220	0/0:7,0:7:16.95:0,17,130	0/0:23,0:23:51.14:0,51,1299	0/0:26,0:27:63.16:0,63,1605	0/0:12,0:12:33.07:0,33,864	0/0:20,0:20:39.12:0,39,943	0/1:8,1:35:99:273,0,660	1/1:23,0:22:15.05:204,15,0	0/0:7,0:7:14.97:0,15,125
chr10	95120232	.	A	AT	6033.60	PASS	AC=52;AF=1.000;AN=52;DP=370;FS=0.000;HRun=3;HaplotypeScore=179.9775;InbreedingCoeff=-0.0365;MQ=20.81;MQ0=130;QD=16.35;VQSLOD=4.2744;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,6:8:6.02:84,6,0	1/1:2,8:8:24.08:335,24,0	./.	./.	1/1:8,6:6:12.04:167,12,0	1/1:2,8:7:21.07:293,21,0	1/1:4,6:7:18.06:251,18,0	1/1:5,11:10:30.10:416,30,0	1/1:8,9:10:21.07:293,21,0	1/1:17,6:7:15.05:209,15,0	1/1:9,7:8:21.07:293,21,0	1/1:1,7:7:15.05:209,15,0	1/1:5,12:14:36.12:496,36,0	1/1:6,8:8:18.06:251,18,0	1/1:6,6:7:18.06:248,18,0	1/1:4,3:3:9.03:124,9,0	1/1:9,3:6:9.03:126,9,0	1/1:3,4:4:6.02:84,6,0	1/1:8,3:3:3.01:42,3,0	1/1:23,7:10:21.06:279,21,0	1/1:3,5:6:6.02:83,6,0	1/1:10,6:8:18.06:250,18,0	1/1:18,7:7:21.07:293,21,0	1/1:12,4:6:3.01:42,3,0	1/1:4,7:7:15.05:209,15,0	1/1:6,5:8:12.04:168,12,0	1/1:5,15:15:42.14:581,42,0	1/1:8,4:5:15.05:206,15,0
chr10	95122575	.	T	TA	532.56	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.136;DP=680;FS=46.523;HRun=4;HaplotypeScore=65.2328;InbreedingCoeff=0.9975;MQ=66.11;MQ0=2;MQRankSum=-4.626;QD=33.29;ReadPosRankSum=-1.888;VQSLOD=-0.0122;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,1527	0/0:13,0:13:30.07:0,30,330	0/0:30,0:30:75.18:0,75,838	0/0:23,0:23:60.13:0,60,650	0/0:27,0:27:78.16:0,78,853	1/1:0,8:8:24.08:326,24,0	1/1:0,8:8:24.08:327,24,0	0/0:36,0:35:90.24:0,90,1013	0/0:24,0:24:72.19:0,72,806	0/0:37,0:37:99:0,102,1138	0/0:39,0:39:99:0,105,1189	0/0:25,0:25:63.18:0,63,715	0/0:18,0:18:48.12:0,48,534	0/0:27,0:27:66.19:0,66,748	0/0:25,0:25:75.21:0,75,851	0/0:27,0:27:75.18:0,75,832	0/0:20,0:20:60.15:0,60,669	0/0:14,0:14:39.08:0,39,429	0/0:15,0:14:39.11:0,39,442	0/0:22,0:22:57.14:0,57,637	0/0:30,1:31:43.33:0,43,868	0/0:22,0:22:63.14:0,63,694	0/0:30,0:30:84.22:0,84,936	0/0:17,0:17:51.13:0,51,569	0/0:17,0:17:51.15:0,51,578	0/0:23,0:23:69.18:0,69,773	0/0:41,0:41:99:0,108,1215	0/0:13,0:13:36.10:0,36,408
chr10	95122743	.	C	CAAGGCCACA	5393.64	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.040;DP=668;FS=0.000;HRun=0;HaplotypeScore=176.7442;InbreedingCoeff=0.9962;MQ=88.09;MQ0=0;MQRankSum=-9.348;QD=128.42;ReadPosRankSum=-1.881;VQSLOD=4.8532;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:79.73:0,80,2441	0/0:7,0:7:21.02:0,21,481	0/0:39,0:38:99:0,104,3136	0/0:24,0:25:52.85:0,53,1831	0/0:26,0:26:78.22:0,78,2407	0/0:17,0:17:48.12:0,48,1430	0/0:18,0:18:48.16:0,48,1512	1/1:8,19:30:70.89:4030,71,0	0/0:21,0:21:63.21:0,63,1982	0/0:26,0:26:74.93:0,75,2340	0/0:21,0:21:60.21:0,60,1884	0/0:17,0:17:48.15:0,48,1433	0/0:21,0:21:57.20:0,57,1813	0/0:28,0:28:84.27:0,84,2575	0/0:28,0:28:81.26:0,81,2511	0/0:29,0:29:87.30:0,87,2789	0/0:12,0:12:36.12:0,36,1116	0/0:9,0:9:24.01:0,24,620	0/0:17,0:17:51.18:0,51,1649	0/0:33,0:33:99:0,99,2939	0/0:22,0:22:66.15:0,66,1917	0/0:24,0:24:72.23:0,72,2220	0/0:24,0:24:72.25:0,72,2221	0/0:26,0:26:78.19:0,78,2289	0/0:40,0:40:99:0,120,3816	0/0:23,0:23:66.23:0,66,2084	0/0:44,0:43:99:0,129,4068	1/1:0,9:12:27.09:1363,27,0
chr10	95123251	.	A	AT	11639.30	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-12.399;DP=541;FS=18.337;HRun=8;HaplotypeScore=45.2307;InbreedingCoeff=0.9764;MQ=71.24;MQ0=0;MQRankSum=-0.663;QD=27.98;ReadPosRankSum=3.943;VQSLOD=3.3269;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:66.02:0,66,604	1/1:0,7:7:18.05:208,18,0	0/0:17,0:17:29.99:0,30,265	0/0:6,0:6:14.98:0,15,127	1/1:4,21:25:66.03:703,66,0	1/1:1,22:23:57.17:658,57,0	1/1:2,14:16:36.11:416,36,0	0/0:31,0:31:75:0,75,679	1/1:2,15:17:17.67:457,18,0	1/1:2,23:25:69.19:785,69,0	1/1:2,29:31:84.25:967,84,0	1/1:3,22:25:51.15:589,51,0	1/1:2,11:13:24.07:276,24,0	1/1:1,16:17:42.12:485,42,0	1/1:7,17:24:48.14:554,48,0	1/1:3,16:19:48.14:554,48,0	0/0:25,0:25:63.02:0,63,577	0/0:6,0:6:9:0,9,82	1/1:2,22:24:66.20:762,66,0	1/1:1,21:22:57.13:643,57,0	1/1:7,13:20:30.09:346,30,0	1/1:0,14:14:42.04:467,42,0	1/1:5,16:21:21.31:428,21,0	1/1:0,4:4:12.04:138,12,0	1/1:0,19:19:51.15:589,51,0	1/1:1,24:25:72.20:820,72,0	1/1:0,25:25:69.21:796,69,0	0/0:13,0:13:36.02:0,36,329
chr10	95123440	.	AAT	A	9344.74	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=15.602;DP=474;FS=8.903;HRun=0;HaplotypeScore=59.1927;InbreedingCoeff=0.9861;MQ=76.00;MQ0=0;MQRankSum=0.858;QD=38.30;ReadPosRankSum=2.560;VQSLOD=6.1722;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.18:0,72,1168	1/1:0,4:4:12.04:177,12,0	0/0:9,0:9:8.94:0,9,227	0/0:10,0:10:24.02:0,24,331	1/1:0,28:28:81.08:1074,81,0	0/0:23,0:23:69.24:0,69,1216	0/0:11,0:11:33.11:0,33,570	0/0:36,0:36:99:0,108,1842	1/1:1,11:12:33.11:486,33,0	1/1:0,22:22:66.21:935,66,0	1/1:0,22:22:63.21:927,63,0	0/0:11,0:11:33.11:0,33,577	0/0:20,0:20:54.09:0,54,833	0/0:18,0:18:54.13:0,54,891	1/1:1,20:21:48.16:707,48,0	1/1:1,14:15:39.13:574,39,0	0/0:20,0:20:60.19:0,60,1017	0/0:10,0:10:30.07:0,30,488	1/1:0,19:19:57.16:793,57,0	1/1:0,26:26:78.19:1100,78,0	1/1:1,15:16:37.37:533,37,0	0/0:8,0:8:24.04:0,24,338	0/0:9,0:9:27.04:0,27,415	0/0:7,0:7:21.07:0,21,370	1/1:0,13:13:30.10:442,30,0	1/1:1,19:20:60.16:839,60,0	1/1:0,26:26:54.14:759,54,0	0/0:13,0:13:39.06:0,39,596
chr10	95126367	.	CCTCT	C	426.98	PASS	AB=0.878;AC=15;AF=0.313;AN=48;BaseQRankSum=1.286;DP=586;FS=24.198;HRun=0;HaplotypeScore=100.5440;InbreedingCoeff=0.2522;MQ=65.21;MQ0=19;MQRankSum=-1.264;QD=2.16;ReadPosRankSum=0.956;VQSLOD=0.0084;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:35,2:37:69.31:135,0,69	0/0:10,0:10:14.72:0,15,187	./.	0/0:54,0:23:0:0,0,0	0/0:22,0:21:5.90:0,6,75	1/1:16,0:16:3.01:32,3,0	0/1:21,4:24:15.33:51,0,15	./.	0/0:20,0:20:5.81:0,6,64	0/0:11,0:11:6.02:0,6,104	./.	1/1:9,1:10:6.02:88,6,0	1/1:21,2:24:5.49:69,5,0	1/1:15,0:15:3.01:41,3,0	0/0:20,0:20:14.82:0,15,230	0/0:22,0:22:20.83:0,21,244	0/0:32,0:33:10.86:0,11,565	0/0:13,0:14:8.76:0,9,98	0/0:15,0:14:6.02:0,6,122	0/0:22,0:21:0:0,0,0	0/0:24,0:24:16.55:0,17,177	1/1:20,0:20:3:28,3,0	0/1:13,0:13:5.97:22,0,6	0/1:13,9:23:40.73:62,0,41	0/0:20,0:20:5.70:0,6,87	0/0:24,0:24:12.04:0,12,193	0/1:13,2:15:34.45:40,0,34	./.
chr10	95126418	.	CTCTT	C	453.79	PASS	AB=0.960;AC=9;AF=0.161;AN=56;BaseQRankSum=0.752;DP=541;FS=38.217;HRun=0;HaplotypeScore=100.0579;InbreedingCoeff=0.3007;MQ=59.81;MQ0=25;MQRankSum=-3.169;QD=3.46;ReadPosRankSum=-2.040;VQSLOD=0.0254;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:46,0:44:99:108,0,586	0/0:8,0:8:10.08:0,10,318	0/0:21,0:13:22.95:0,23,215	0/0:34,0:18:30.06:0,30,315	0/0:19,0:18:45.61:0,46,453	0/1:13,0:13:18.14:18,0,198	0/0:25,0:24:17.64:0,18,434	1/1:17,0:14:37.24:302,37,0	0/0:19,0:19:41.25:0,41,420	0/0:18,0:16:48.08:0,48,627	0/0:12,0:12:33.49:0,33,300	0/1:14,1:13:51.59:52,0,241	0/1:12,0:11:44.53:45,0,172	0/1:16,3:19:7.74:8,0,303	0/0:18,0:18:39.74:0,40,457	0/0:17,0:17:46.60:0,47,630	0/0:24,0:24:8.20:0,8,764	0/0:11,0:11:26.69:0,27,338	0/0:17,0:17:51:0,51,557	0/0:17,0:16:38.83:0,39,415	0/0:24,0:23:36.37:0,36,468	0/0:8,2:10:17.84:0,18,147	0/0:25,0:24:34.43:0,34,409	0/0:35,0:35:8.92:0,9,349	0/0:18,0:17:32.34:0,32,319	0/0:16,0:16:44.81:0,45,511	0/0:22,0:22:34.71:0,35,435	1/1:9,0:5:8.95:68,9,0
chr10	95127738	.	C	CT	1155	PASS	AB=0.962;AC=5;AF=0.089;AN=56;BaseQRankSum=-6.847;DP=694;FS=7.942;HRun=9;HaplotypeScore=69.1270;InbreedingCoeff=0.8318;MQ=78.12;MQ0=0;MQRankSum=-1.537;QD=14.44;ReadPosRankSum=-2.178;VQSLOD=2.9414;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:83.88:0,84,712	0/0:11,0:11:26.99:0,27,234	0/1:23,1:25:4.09:4,0,297	0/0:15,0:15:26.86:0,27,222	0/0:34,0:35:76.95:0,77,653	0/0:22,0:24:62.02:0,62,524	0/0:23,0:23:62.77:0,63,530	1/1:8,25:33:66.13:711,66,0	0/0:23,0:23:62.98:0,63,544	0/0:29,0:29:71.96:0,72,623	0/0:26,0:27:74.02:0,74,631	0/0:28,0:28:71.97:0,72,622	0/0:25,0:26:71.02:0,71,605	0/0:21,0:21:56.97:0,57,491	0/0:35,0:35:98.95:0,99,856	0/0:19,0:20:46.99:0,47,394	0/0:17,0:17:41.96:0,42,360	0/0:14,0:15:37.93:0,38,300	0/0:16,0:16:41.99:0,42,364	0/0:40,0:42:99:0,115,952	0/0:9,0:9:23.96:0,24,199	0/0:21,0:21:59.97:0,60,517	0/0:30,0:30:89.98:0,90,780	0/0:15,0:15:35.96:0,36,308	0/0:24,0:23:62.87:0,63,532	0/0:37,0:38:88.96:0,89,751	0/0:38,0:38:70.76:0,71,782	1/1:0,22:22:51.14:564,51,0
chr10	95129645	.	AT	A	784.79	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.642;DP=720;FS=10.711;HRun=1;HaplotypeScore=117.7028;InbreedingCoeff=0.9980;MQ=85.12;MQ0=0;MQRankSum=-2.929;QD=37.37;ReadPosRankSum=-0.882;VQSLOD=1.9507;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.26:0,81,1257	0/0:21,0:21:63.19:0,63,961	0/0:33,0:33:83.09:0,83,1392	0/0:18,0:18:44.65:0,45,641	0/0:22,0:22:63.21:0,63,1002	0/0:35,0:35:99:0,99,1555	1/1:0,21:21:63.21:880,63,0	0/0:43,0:43:99:0,129,1999	0/0:23,0:23:66.23:0,66,1055	0/0:21,0:21:60.20:0,60,962	0/0:27,0:27:81.28:0,81,1294	0/0:23,0:23:69.24:0,69,1102	0/0:23,0:23:63.20:0,63,984	0/0:19,0:19:51.17:0,51,815	0/0:30,0:30:78.25:0,78,1224	0/0:20,0:20:54.17:0,54,837	0/0:29,0:29:84.29:0,84,1339	0/0:19,0:19:54.16:0,54,837	0/0:30,0:30:87.29:0,87,1385	0/0:40,0:40:99:0,120,1865	0/0:29,0:29:69.24:0,69,1103	0/0:21,0:21:60.20:0,60,956	0/0:30,0:30:83.95:0,84,1306	0/0:36,0:36:93.32:0,93,1484	0/0:17,0:17:51.16:0,51,792	0/0:24,0:24:72.23:0,72,1120	0/0:28,0:28:78.27:0,78,1246	0/0:10,0:10:24.08:0,24,384
chr10	95129667	.	A	ATGTC	22146.76	PASS	AB=0.906;AC=46;AF=0.821;AN=56;BaseQRankSum=0.535;DP=767;FS=0.000;HRun=0;HaplotypeScore=135.3276;InbreedingCoeff=0.7237;MQ=72.52;MQ0=2;MQRankSum=0.090;QD=33.97;ReadPosRankSum=0.816;VQSLOD=4.6527;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:57.19:0,57,893	1/1:10,8:18:21.07:501,21,0	0/0:29,0:26:9.03:0,9,124	0/0:25,0:21:24.05:0,24,317	1/1:9,16:28:45.15:1074,45,0	1/1:14,19:34:51.18:1218,51,0	0/1:23,4:27:8.52:674,0,9	1/1:32,7:43:51.11:886,51,0	1/1:7,22:33:60.21:1430,60,0	1/1:13,9:23:33.11:772,33,0	1/1:16,11:28:27.09:643,27,0	1/1:11,11:25:27.09:644,27,0	1/1:7,15:23:42.14:1001,42,0	1/1:8,12:21:30.10:703,30,0	1/1:10,25:35:60.21:1432,60,0	1/1:6,14:20:36.12:860,36,0	0/0:28,0:28:6.72:0,7,802	0/1:15,1:16:43.69:44,0,355	1/1:18,8:27:34.35:677,34,0	1/1:18,20:39:60.21:1393,60,0	1/1:14,15:29:24.08:573,24,0	1/1:7,13:22:36.12:860,36,0	1/1:18,16:35:41.94:998,42,0	1/1:11,29:40:72.25:1720,72,0	1/1:6,11:17:33.11:782,33,0	1/1:5,16:25:60.19:1327,60,0	1/1:6,24:31:63.21:1504,63,0	1/1:3,9:12:18.06:430,18,0
chr10	95133008	.	TGGG	T	548.46	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=0.157;DP=332;FS=13.853;HRun=13;HaplotypeScore=53.0795;InbreedingCoeff=0.5269;MQ=78.02;MQ0=0;MQRankSum=-3.188;QD=13.06;ReadPosRankSum=3.861;VQSLOD=0.1185;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:11.03:0,11,82	0/0:3,0:3:3.47:0,3,10	0/0:19,0:17:14.06:0,14,176	0/0:6,0:5:0.13:0,0,42	0/0:15,0:21:4.98:0,5,12	0/0:11,0:13:9:0,9,92	0/0:12,0:15:16.22:0,16,141	1/1:3,6:11:20.88:209,21,0	0/0:6,0:8:4.26:0,4,41	0/0:6,0:6:0:0,0,0	0/0:8,0:8:6.56:0,7,21	0/0:14,0:16:6:0,6,68	0/0:12,0:13:5.99:0,6,48	0/0:13,0:13:11.98:0,12,115	1/1:5,11:16:33.08:400,33,0	0/0:8,0:12:6.73:0,7,34	0/0:13,0:13:9.03:0,9,145	0/0:21,0:21:21.02:0,21,277	0/0:14,0:15:14.95:0,15,117	0/0:3,0:4:8.99:0,9,85	0/0:6,0:10:5.98:0,6,47	0/0:7,0:7:5.95:0,6,60	0/0:8,0:10:7.24:0,7,68	0/0:12,0:12:11.99:0,12,115	1/1:8,2:10:2.99:36,3,0	./.	0/0:14,0:16:7.24:0,7,69	1/1:4,1:5:2.98:36,3,0
chr10	95133462	.	A	AC	1698.54	PASS	AB=0.789;AC=14;AF=0.250;AN=56;BaseQRankSum=9.979;DP=377;FS=59.890;HRun=0;HaplotypeScore=93.2988;InbreedingCoeff=-0.3277;MQ=49.23;MQ0=1;MQRankSum=-9.028;QD=6.96;ReadPosRankSum=2.801;VQSLOD=1.1906;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:36.08:0,36,480	0/1:7,4:11:99:146,0,221	0/0:1,0:1:3.01:0,3,42	0/0:3,0:3:6.02:0,6,84	0/1:9,6:15:72.94:73,0,299	0/1:21,3:24:63.31:63,0,747	0/0:7,0:7:21.03:0,21,270	0/0:26,0:26:75.25:0,75,1049	0/0:11,0:11:30.10:0,30,419	0/1:20,5:25:82.80:83,0,724	0/1:11,5:16:99:107,0,380	0/1:5,1:6:26.42:26,0,192	0/1:13,2:15:44.98:45,0,476	0/0:10,0:10:30.10:0,30,413	0/0:15,0:15:42.14:0,42,581	0/0:10,0:10:30.06:0,30,396	0/0:9,0:9:24.08:0,24,330	0/0:6,0:6:18.06:0,18,252	0/0:13,0:13:36.96:0,37,469	0/1:12,14:26:99:479,0,394	0/0:6,0:6:18.02:0,18,230	0/1:6,7:13:99:275,0,190	0/1:7,6:13:99:174,0,218	0/0:3,0:3:0:0,0,0	0/1:16,5:21:99:147,0,571	0/1:22,3:25:53.52:54,0,778	0/1:20,4:22:99:116,0,687	0/1:8,2:10:63.63:64,0,227
chr10	95133661	.	TG	T	7329.46	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-6.959;DP=605;FS=1.862;HRun=1;HaplotypeScore=105.8584;InbreedingCoeff=0.9993;MQ=89.12;MQ0=0;MQRankSum=-0.296;QD=37.98;ReadPosRankSum=3.582;VQSLOD=5.0083;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.27:0,78,1247	0/0:10,0:10:30.10:0,30,479	0/0:27,0:27:56.01:0,56,1021	0/0:21,0:21:60.16:0,60,818	0/0:21,0:21:57.19:0,57,906	1/1:0,36:36:99:1426,102,0	1/1:0,18:18:51.17:713,51,0	0/0:33,0:33:99:0,99,1541	0/0:17,0:16:51.17:0,51,815	0/0:23,0:23:66.21:0,66,1024	0/0:18,0:18:51.17:0,51,810	1/1:0,18:18:51.17:713,51,0	1/1:0,22:22:57.19:789,57,0	1/1:0,26:26:72.24:1004,72,0	0/0:25,0:25:75.26:0,75,1198	1/1:0,20:20:57.19:797,57,0	0/0:19,0:19:57.19:0,57,911	0/0:16,0:16:48.16:0,48,765	0/0:31,0:31:92.88:0,93,1397	0/0:19,0:19:51.16:0,51,791	0/0:17,0:17:51.16:0,51,788	1/1:0,15:15:42.14:587,42,0	1/1:0,23:23:57.19:796,57,0	1/1:0,15:15:36.12:503,36,0	0/0:22,0:22:66.23:0,66,1053	0/0:27,0:27:81.28:0,81,1295	0/0:32,0:32:93.30:0,93,1461	0/0:7,0:7:21.07:0,21,336
chr10	95134171	.	A	AC	5491.15	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-14.350;DP=473;FS=10.239;HRun=3;HaplotypeScore=47.4186;InbreedingCoeff=0.9946;MQ=81.84;MQ0=0;MQRankSum=-0.441;QD=33.48;ReadPosRankSum=1.304;VQSLOD=4.5191;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.16:0,72,817	0/0:6,0:6:18:0,18,179	0/0:16,0:16:44.97:0,45,457	0/0:11,0:11:27.86:0,28,278	0/0:22,0:22:62.20:0,62,695	1/1:1,19:20:57.19:772,57,0	1/1:0,15:15:39.13:528,39,0	1/1:1,26:27:78.14:926,78,0	0/0:9,0:9:27.07:0,27,310	0/0:16,0:16:47.97:0,48,520	0/0:17,0:17:39.58:0,40,513	1/1:1,18:19:45.15:608,45,0	1/1:0,18:18:45.05:609,45,0	1/1:1,10:11:24.03:304,24,0	0/0:17,0:17:45.14:0,45,537	0/0:17,0:17:51.14:0,51,589	0/0:14,0:14:42.13:0,42,501	0/0:20,0:20:51.16:0,51,609	0/0:16,0:16:48.09:0,48,523	0/0:17,0:17:42.12:0,42,491	0/0:11,0:11:33.10:0,33,393	1/1:1,7:8:15.05:203,15,0	1/1:0,12:12:21.07:284,21,0	1/1:1,7:8:21.07:284,21,0	0/0:20,0:20:60.18:0,60,716	0/0:29,0:29:87.26:0,87,1030	0/0:27,0:27:75.14:0,75,875	1/1:0,26:26:72.24:973,72,0
chr10	95135189	.	C	CT	1274.66	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.396;DP=605;FS=13.797;HRun=6;HaplotypeScore=57.7245;InbreedingCoeff=0.9976;MQ=85.89;MQ0=0;MQRankSum=-2.368;QD=28.97;ReadPosRankSum=-4.332;VQSLOD=1.2809;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.14:0,60,612	0/0:7,0:7:21.05:0,21,214	0/0:21,0:21:45.07:0,45,450	0/0:20,0:20:39.03:0,39,380	0/0:27,0:27:75.16:0,75,765	0/0:33,0:33:87.20:0,87,888	0/0:13,0:13:36.08:0,36,367	1/1:5,27:32:78.23:963,78,0	0/0:19,0:19:51.10:0,51,514	0/0:30,0:30:90.21:0,90,918	0/0:29,0:29:87.20:0,87,887	0/0:14,0:14:42.10:0,42,429	0/0:20,0:20:54.10:0,54,544	0/0:30,0:30:78.14:0,78,782	0/0:32,0:32:93.21:0,93,949	0/0:22,0:22:63.14:0,63,643	0/0:27,0:27:75.17:0,75,765	0/0:16,0:16:39.07:0,39,390	0/0:25,0:25:69.16:0,69,704	0/0:18,0:18:51.12:0,51,520	0/0:21,0:21:60.13:0,60,612	0/0:16,0:16:45.10:0,45,459	0/0:19,0:19:48.11:0,48,490	0/0:16,0:16:42.09:0,42,429	0/0:20,0:20:60.12:0,60,606	0/0:16,0:16:42.10:0,42,429	0/0:30,0:30:81.15:0,81,812	1/1:0,12:12:36.07:433,36,0
chr10	95137746	.	A	AT	1664.85	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-10.185;DP=631;FS=1.272;HRun=1;HaplotypeScore=56.0536;InbreedingCoeff=0.9896;MQ=88.02;MQ0=0;MQRankSum=-3.940;QD=35.42;ReadPosRankSum=-3.495;VQSLOD=2.4443;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.26:0,84,1077	0/0:8,0:8:21.07:0,21,273	0/0:26,0:26:63.19:0,63,792	0/0:20,0:19:54.14:0,54,668	0/0:30,0:30:90.29:0,90,1157	0/0:21,0:21:63.20:0,63,818	0/0:22,0:22:66.20:0,66,842	1/1:5,35:40:99:1515,105,0	0/0:22,0:22:63.20:0,63,818	0/0:29,0:29:84.27:0,84,1090	0/0:18,0:18:54.18:0,54,701	0/0:17,0:17:51.17:0,51,662	0/0:27,0:27:81.26:0,81,1052	0/0:25,0:25:75.22:0,75,945	0/0:25,0:25:72.23:0,72,935	0/0:44,0:44:99:0,129,1661	0/0:18,0:18:54.18:0,54,701	0/0:7,0:7:18.06:0,18,234	0/0:19,0:19:57.17:0,57,727	0/0:20,0:20:60.20:0,60,779	0/0:16,0:16:48.16:0,48,623	0/0:20,0:19:60.18:0,60,766	0/0:13,0:13:39.13:0,39,506	0/0:26,0:26:75.24:0,75,974	0/0:23,0:23:63.18:0,63,802	0/0:24,0:24:72.22:0,72,911	0/0:36,0:35:99:0,108,1386	1/1:0,7:7:18.06:270,18,0
chr10	95138890	.	G	GT	426.89	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.809;DP=382;FS=0.000;HRun=8;HaplotypeScore=84.3762;InbreedingCoeff=0.9008;MQ=58.26;MQ0=3;MQRankSum=-1.551;QD=23.72;ReadPosRankSum=0.761;VQSLOD=4.0744;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:42.01:0,42,384	0/0:4,0:4:12.01:0,12,110	0/0:18,0:14:20.63:0,21,165	0/0:16,1:11:15.03:0,15,91	0/0:16,0:16:48.01:0,48,434	0/0:12,0:12:27.01:0,27,246	0/0:6,0:6:15:0,15,137	0/0:25,0:25:60.03:0,60,549	1/1:3,15:18:46.38:522,46,0	0/0:25,0:24:66.03:0,66,604	0/0:18,0:18:48.01:0,48,439	0/0:11,0:11:33.02:0,33,302	0/0:15,0:15:36.01:0,36,329	0/0:9,0:9:24.01:0,24,219	0/0:10,0:10:27.01:0,27,247	0/0:11,0:11:30.02:0,30,274	0/0:8,0:8:24.01:0,24,220	0/0:5,0:5:15.01:0,15,137	0/0:15,0:15:33.01:0,33,301	0/0:21,0:21:60.03:0,60,545	0/0:9,0:9:23.99:0,24,214	0/0:12,0:12:36.02:0,36,329	0/0:14,0:14:42.02:0,42,384	0/0:6,0:6:18.01:0,18,165	0/0:20,0:20:48.02:0,48,439	0/0:18,0:18:51.03:0,51,467	0/0:10,0:9:26.98:0,27,237	0/0:9,0:9:18.15:0,18,211
chr10	95141163	.	A	AAAAC	817.45	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.185;DP=569;FS=10.257;HRun=0;HaplotypeScore=88.9875;InbreedingCoeff=0.8714;MQ=57.28;MQ0=3;MQRankSum=-5.589;QD=20.44;ReadPosRankSum=-3.945;VQSLOD=1.7496;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:63.21:0,63,1008	0/0:5,0:5:9.02:0,9,123	0/0:9,0:6:3.01:0,3,37	0/0:17,0:11:15.04:0,15,202	0/0:22,0:22:54.16:0,54,821	0/0:15,0:14:36.12:0,36,580	0/0:12,0:12:18.03:0,18,240	1/1:23,9:30:35.84:609,36,0	0/0:26,0:26:51.17:0,51,798	0/0:21,0:21:45.14:0,45,686	0/0:17,0:18:36.07:0,36,488	0/0:17,0:17:39.13:0,39,628	0/0:19,0:19:39.13:0,39,628	0/0:16,0:16:33.10:0,33,508	0/0:21,0:21:42.13:0,42,652	0/0:15,0:15:18.04:0,18,266	0/0:15,0:15:30.10:0,30,483	0/0:17,0:17:39.07:0,39,566	0/0:21,0:20:21.07:0,21,337	0/0:27,0:27:56.92:0,57,820	0/0:25,0:25:57.13:0,57,866	0/0:20,0:20:45.15:0,45,704	0/0:37,0:37:93.26:0,93,1381	0/0:25,0:25:45.09:0,45,651	0/0:24,0:24:54.17:0,54,848	0/0:25,0:25:63.21:0,63,993	0/0:34,0:34:57.13:0,57,918	1/1:3,4:7:17.96:328,18,0
chr10	95142014	.	T	TA	10265.89	PASS	AB=0.889;AC=47;AF=0.839;AN=56;BaseQRankSum=-3.283;DP=496;FS=18.701;HRun=8;HaplotypeScore=54.2640;InbreedingCoeff=0.8529;MQ=70.52;MQ0=3;MQRankSum=-1.047;QD=24.04;ReadPosRankSum=2.333;VQSLOD=3.5032;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:69.02:0,69,631	1/1:0,4:4:9.03:104,9,0	0/0:4,0:4:9:0,9,82	0/1:7,0:8:6.56:7,0,60	1/1:5,32:37:87.26:1004,87,0	1/1:2,2:27:62.53:318,63,0	1/1:0,1:6:11.36:58,11,0	1/1:4,22:26:66.20:761,66,0	1/1:2,6:8:18.05:208,18,0	1/1:3,29:32:90.25:1023,90,0	1/1:1,12:13:36.11:415,36,0	1/1:2,0:15:31.25:159,31,0	1/1:1,1:13:34.29:194,34,0	1/1:4,0:15:22.76:116,23,0	1/1:0,14:14:42.12:485,42,0	1/1:2,17:19:54.15:616,54,0	0/0:18,0:18:41.94:0,42,369	0/0:19,0:19:57.03:0,57,522	1/1:0,16:16:48.14:553,48,0	1/1:2,25:27:50.75:823,51,0	1/1:0,16:16:36.11:415,36,0	1/1:1,0:14:39.80:202,40,0	1/1:2,1:19:46.13:252,46,0	1/1:0,0:9:22.73:115,23,0	1/1:3,15:18:42.12:485,42,0	1/1:5,25:30:75.19:845,75,0	1/1:2,19:21:57.17:658,57,0	1/1:2,15:17:39.12:450,39,0
chr10	95144645	.	A	AG	1664.48	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.600;DP=672;FS=8.001;HRun=4;HaplotypeScore=92.6271;InbreedingCoeff=0.9998;MQ=88.45;MQ0=0;MQRankSum=-0.529;QD=33.97;ReadPosRankSum=-3.719;VQSLOD=1.9738;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.19:0,69,782	0/0:12,0:12:33.09:0,33,374	0/0:32,0:32:66.12:0,66,815	0/0:17,0:17:45.11:0,45,500	0/0:28,0:28:72.19:0,72,804	0/0:19,0:19:57.12:0,57,630	0/0:29,0:29:87.22:0,87,967	1/1:3,31:34:87.27:1171,87,0	0/0:23,0:23:66.15:0,66,735	0/0:33,0:33:84.23:0,84,951	0/0:18,0:18:45.10:0,45,492	0/0:26,0:26:75.21:0,75,850	0/0:25,0:25:72.17:0,72,803	0/0:20,0:20:51.13:0,51,566	0/0:27,0:27:75.21:0,75,851	0/0:16,0:16:45.13:0,45,511	0/0:17,0:17:45.13:0,45,510	0/0:19,0:19:54.13:0,54,598	0/0:23,0:23:60.17:0,60,680	0/0:32,0:32:93.25:0,93,1045	0/0:30,0:30:87.23:0,87,976	0/0:31,0:31:87.25:0,87,987	0/0:30,0:30:84.22:0,84,942	0/0:20,0:20:54.15:0,54,613	0/0:19,0:19:54.15:0,54,613	0/0:26,0:26:78.21:0,78,875	0/0:26,0:26:75.21:0,75,849	1/1:0,15:15:45.15:615,45,0
chr10	95146967	.	G	GT	685.13	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.742;DP=561;FS=0.769;HRun=6;HaplotypeScore=54.8497;InbreedingCoeff=0.9632;MQ=71.73;MQ0=1;MQRankSum=-0.906;QD=21.41;ReadPosRankSum=-3.042;VQSLOD=2.2341;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.13:0,69,694	0/0:7,0:7:21.03:0,21,208	0/0:22,0:19:16.65:0,17,327	0/0:25,0:19:39.68:0,40,351	0/0:18,0:18:51.11:0,51,519	0/0:18,0:18:54.08:0,54,535	0/0:21,0:21:48.07:0,48,475	1/1:9,19:28:54.14:651,54,0	0/0:17,0:17:45.07:0,45,446	0/0:21,0:21:54.12:0,54,551	0/0:11,0:11:33.02:0,33,319	0/0:20,0:20:54.12:0,54,551	0/0:29,0:29:84.15:0,84,841	0/0:21,0:21:60.13:0,60,611	0/0:17,0:17:48.09:0,48,482	0/0:11,0:11:30.05:0,30,301	0/0:29,0:29:78.12:0,78,773	0/0:31,0:31:81.13:0,81,815	0/0:14,0:14:13.81:0,14,333	0/0:18,0:18:45.10:0,45,456	0/0:26,0:26:69.13:0,69,692	0/0:8,0:8:21.03:0,21,208	0/0:15,0:15:45.10:0,45,458	0/0:25,0:25:69.12:0,69,693	0/0:22,0:22:57.13:0,57,581	0/0:20,0:20:54.09:0,54,537	0/0:38,0:38:99:0,99,1009	1/1:0,4:4:12.04:151,12,0
chr10	95149754	.	G	GTTT	6870.62	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-10.167;DP=439;FS=0.433;HRun=0;HaplotypeScore=63.5996;InbreedingCoeff=0.9916;MQ=96.84;MQ0=0;MQRankSum=-6.573;QD=66.06;ReadPosRankSum=1.266;VQSLOD=6.1061;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:24.31:0,24,499	0/0:6,0:6:18.06:0,18,336	0/0:19,0:19:57.20:0,57,1029	0/0:25,0:25:75.23:0,75,1309	0/0:11,0:11:33.11:0,33,612	0/0:24,0:24:72.25:0,72,1341	0/0:9,0:9:27.09:0,27,504	0/0:35,0:35:99:0,102,1838	0/0:11,0:11:33.11:0,33,615	1/1:0,12:13:36.12:885,36,0	1/1:3,14:17:45.15:1072,45,0	0/0:11,0:11:33.11:0,33,615	0/0:11,0:11:33.09:0,33,582	0/0:16,0:16:45.15:0,45,836	0/0:25,0:25:72.25:0,72,1334	0/0:19,0:19:57.20:0,57,1056	0/0:23,0:23:66.23:0,66,1223	0/0:22,0:22:63.22:0,63,1150	1/1:1,9:11:33.11:788,33,0	1/1:1,20:23:63.22:1535,63,0	1/1:2,14:16:39.13:961,39,0	0/0:11,0:11:30.10:0,30,543	0/0:7,0:7:12.04:0,12,224	0/0:12,0:12:36.12:0,36,671	0/0:16,0:16:45.15:0,45,839	1/1:0,7:8:24.06:540,24,0	1/1:1,13:16:45.63:1090,46,0	0/0:12,0:12:36.12:0,36,671
chr10	95150575	.	C	CT	1375.93	PASS	AB=0.949;AC=7;AF=0.125;AN=56;BaseQRankSum=-7.558;DP=551;FS=0.520;HRun=10;HaplotypeScore=61.7055;InbreedingCoeff=0.4957;MQ=72.79;MQ0=2;MQRankSum=1.034;QD=11.10;ReadPosRankSum=-2.392;VQSLOD=2.3405;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:60.82:0,61,478	0/0:8,0:8:20.97:0,21,172	0/0:16,0:13:20.75:0,21,155	0/1:17,1:14:11.96:12,0,54	0/0:27,0:27:45.74:0,46,522	0/0:17,1:19:21.29:0,21,368	0/0:11,0:11:32.96:0,33,271	1/1:6,28:34:37.80:754,38,0	0/0:12,0:13:29.86:0,30,225	0/0:30,0:30:83.86:0,84,686	0/1:24,3:27:24.08:24,0,440	0/0:16,0:16:32.94:0,33,271	0/0:18,0:20:55:0,55,430	0/0:13,0:14:34.95:0,35,271	0/0:19,0:20:40.93:0,41,320	0/0:15,0:16:43.99:0,44,351	0/0:24,0:24:62.91:0,63,517	0/0:24,0:24:65.82:0,66,524	0/0:22,0:22:50.90:0,51,418	0/0:25,0:26:64.90:0,65,514	0/0:6,0:6:8.98:0,9,74	0/0:8,0:8:20.98:0,21,172	0/0:14,1:16:6:0,6,245	0/1:10,0:10:7.74:8,0,146	0/0:21,0:21:50.94:0,51,419	0/0:26,0:26:71.90:0,72,587	0/0:18,0:19:46.84:0,47,357	1/1:11,24:35:28.91:717,29,0
chr10	95153597	.	C	CT	8664.53	PASS	AB=0.739;AC=41;AF=0.732;AN=56;BaseQRankSum=-10.847;DP=519;FS=10.315;HRun=10;HaplotypeScore=52.9786;InbreedingCoeff=0.6755;MQ=72.11;MQ0=0;MQRankSum=0.209;QD=22.10;ReadPosRankSum=2.035;VQSLOD=5.4304;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:41.93:0,42,345	1/1:1,10:12:32.92:334,33,0	0/1:13,0:13:12.42:12,0,95	0/0:13,0:14:20.79:0,21,172	1/1:2,28:30:59.38:786,59,0	1/1:5,20:27:31.96:560,32,0	1/1:6,10:16:2.44:231,2,0	0/0:42,0:42:86.83:0,87,714	1/1:1,10:12:20.21:250,20,0	1/1:2,16:18:45.10:472,45,0	1/1:4,22:27:69.01:718,69,0	1/1:1,2:3:3.01:32,3,0	0/1:4,6:10:6.60:142,0,7	1/1:3,8:11:21.05:224,21,0	1/1:1,10:11:30.08:320,30,0	1/1:2,13:15:36.09:384,36,0	0/0:16,0:16:41.95:0,42,345	0/0:24,1:25:27.92:0,28,435	1/1:4,19:24:37.87:562,38,0	1/1:4,20:24:41.40:609,41,0	0/1:4,9:13:3.59:171,0,4	1/1:3,15:18:36.09:384,36,0	1/1:3,14:18:1.68:413,2,0	1/1:3,4:8:12.03:128,12,0	1/1:4,21:25:16.88:591,17,0	1/1:4,23:28:68.97:706,69,0	1/1:6,22:28:60.15:636,60,0	0/0:12,0:12:26.93:0,27,217
chr10	95156757	.	T	TG	835.77	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.165;DP=599;FS=27.090;HRun=1;HaplotypeScore=64.0703;InbreedingCoeff=0.9969;MQ=60.95;MQ0=2;MQRankSum=-3.889;QD=22.59;ReadPosRankSum=-0.556;VQSLOD=2.0865;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:66.21:0,66,856	0/0:12,0:12:27.07:0,27,334	0/0:11,0:9:21.07:0,21,266	0/0:22,0:20:57.13:0,57,677	0/0:21,0:21:47.97:0,48,612	0/0:32,0:31:81.26:0,81,1050	0/0:17,0:17:48.16:0,48,621	1/1:4,16:17:33.05:418,33,0	0/0:23,0:22:57.19:0,57,740	0/0:23,0:23:57.18:0,57,729	0/0:24,0:24:45.15:0,45,579	0/0:20,0:20:51.17:0,51,660	0/0:21,0:20:57.15:0,57,719	0/0:20,0:20:45.14:0,45,571	0/0:23,0:23:63.16:0,63,785	0/0:20,0:20:48.14:0,48,609	0/0:34,0:34:93.30:0,93,1207	0/0:17,0:17:48.16:0,48,623	0/0:19,0:18:51.16:0,51,644	0/0:23,0:23:59.99:0,60,707	0/0:25,0:25:63.19:0,63,802	0/0:24,0:24:57.17:0,57,723	0/0:19,0:19:36.12:0,36,467	0/0:12,0:12:33.11:0,33,428	0/0:17,0:17:42.14:0,42,544	0/0:13,0:13:39.13:0,39,506	0/0:44,0:44:99:0,111,1404	1/1:0,17:17:36.12:539,36,0
chr10	95156918	.	AG	A	4571.63	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=9.761;DP=663;FS=3.441;HRun=1;HaplotypeScore=58.9886;InbreedingCoeff=0.9688;MQ=50.01;MQ0=69;MQRankSum=-0.281;QD=27.38;ReadPosRankSum=1.278;VQSLOD=4.7186;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:28:60.13:0,60,861	0/0:8,0:8:24.01:0,24,331	0/0:27,0:3:5.59:0,6,68	0/0:26,0:4:9.03:0,9,135	0/0:30,0:30:66.12:0,66,920	1/1:2,35:32:87.12:1126,87,0	1/1:1,9:6:18.06:251,18,0	0/0:39,0:10:30.10:0,30,449	0/0:25,0:25:66.22:0,66,976	0/0:31,0:31:93.26:0,93,1329	0/0:22,0:20:48.16:0,48,717	1/1:2,11:13:32.98:395,33,0	1/1:0,20:19:48.16:670,48,0	1/1:0,17:15:33.07:437,33,0	0/0:19,0:19:50.90:0,51,654	0/0:19,0:19:53.96:0,54,725	0/0:22,0:21:54.16:0,54,776	0/0:20,0:18:33.11:0,33,493	0/0:22,0:15:45.08:0,45,624	0/0:41,0:38:99:0,99,1364	0/0:25,0:21:54.15:0,54,765	1/1:1,23:23:25.40:635,25,0	1/1:0,25:22:48.12:646,48,0	1/1:1,20:15:33.03:412,33,0	0/0:15,0:13:21.07:0,21,314	0/0:21,0:18:54.17:0,54,771	0/0:35,0:34:84.19:0,84,1205	0/0:15,0:15:45.15:0,45,674
chr10	95157454	.	GA	G	4383.17	PASS	AB=0.535;AC=45;AF=0.804;AN=56;BaseQRankSum=3.481;DP=535;FS=1.729;HRun=9;HaplotypeScore=61.6853;InbreedingCoeff=0.7366;MQ=40.88;MQ0=25;MQRankSum=-0.752;QD=10.01;ReadPosRankSum=-0.038;VQSLOD=3.2917;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:35:84.01:0,84,906	1/1:1,5:6:15.01:137,15,0	0/0:18,0:11:32.43:0,32,337	0/0:10,0:4:12.03:0,12,133	1/1:6,27:22:14.90:137,15,0	0/1:3,20:15:7.43:193,0,7	1/1:3,4:4:9:82,9,0	1/1:3,2:1:3:27,3,0	1/1:0,11:10:6:55,6,0	1/1:4,24:23:60.03:549,60,0	1/1:1,29:29:33.01:302,33,0	1/1:3,12:9:9:82,9,0	1/1:6,12:14:9:82,9,0	1/1:4,11:10:12:110,12,0	1/1:3,23:23:21:192,21,0	1/1:0,14:12:12:110,12,0	0/0:21,0:21:59.95:0,60,661	0/0:9,0:9:23.90:0,24,257	1/1:8,7:10:17.98:158,18,0	1/1:10,18:24:32.92:302,33,0	1/1:2,4:5:4.87:53,5,0	1/1:6,25:30:39.02:357,39,0	1/1:3,20:21:33.01:302,33,0	1/1:4,12:13:6:55,6,0	1/1:2,22:22:27:247,27,0	1/1:3,22:22:51.02:466,51,0	1/1:7,22:21:32.90:302,33,0	1/1:0,9:9:9:82,9,0
chr10	95157906	.	A	AG	93.49	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=3.206;DP=525;FS=2.051;HRun=1;HaplotypeScore=44.1088;InbreedingCoeff=0.7220;MQ=50.19;MQ0=9;MQRankSum=-3.215;QD=11.69;ReadPosRankSum=1.627;VQSLOD=2.0299;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:72.12:0,72,893	0/0:11,0:11:27.09:0,27,350	0/0:14,0:2:6.02:0,6,78	0/0:7,0:2:6.02:0,6,78	0/0:30,0:30:63.20:0,63,805	0/0:28,0:28:66.21:0,66,845	0/0:9,0:8:18.06:0,18,233	./.	0/0:17,0:15:33.11:0,33,428	0/0:21,0:20:57.17:0,57,727	0/0:14,0:14:39.13:0,39,505	0/0:20,0:20:48.09:0,48,602	0/0:17,0:16:42.12:0,42,530	0/0:23,0:22:60.20:0,60,778	0/0:19,0:19:42.12:0,42,520	0/0:15,0:15:33.09:0,33,414	0/0:22,0:21:51.15:0,51,646	0/0:27,0:24:54.18:0,54,701	0/0:19,0:14:42.13:0,42,533	0/0:18,1:19:45.02:0,45,542	0/0:15,0:12:33.11:0,33,425	0/0:30,0:29:72.19:0,72,904	0/0:25,0:25:66.21:0,66,845	0/0:7,0:7:6.02:0,6,78	0/0:19,0:19:45.15:0,45,583	0/0:21,0:18:54.12:0,54,658	0/0:26,0:25:51.17:0,51,661	1/1:1,7:4:12.04:179,12,0
chr10	95158292	.	A	AT	595.56	PASS	AB=1.000;AC=21;AF=0.875;AN=24;BaseQRankSum=-2.311;DP=44;FS=12.041;HRun=2;HaplotypeScore=7.9770;InbreedingCoeff=-0.0062;MQ=96.11;MQ0=2;MQRankSum=-2.012;QD=25.89;ReadPosRankSum=0.820;VQSLOD=1.4011;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:3.01:47,3,0	./.	0/0:8,0:2:1.25:0,1,3	0/1:7,0:5:10.20:10,0,25	./.	1/1:0,1:1:3.01:48,3,0	./.	./.	./.	1/1:0,2:2:6.02:96,6,0	1/1:0,1:1:3.01:48,3,0	./.	./.	./.	1/1:0,1:1:3.01:48,3,0	./.	./.	./.	./.	1/1:1,2:3:6.02:95,6,0	./.	1/1:0,1:1:3.01:48,3,0	1/1:0,2:2:6.02:96,6,0	./.	1/1:0,2:2:6.02:96,6,0	1/1:0,1:1:3.01:48,3,0	./.	./.
chr10	95166521	.	CAG	C	1204.01	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=4.219;DP=746;FS=0.000;HRun=0;HaplotypeScore=37.7328;InbreedingCoeff=0.8812;MQ=15.81;MQ0=413;MQRankSum=-0.109;QD=12.67;ReadPosRankSum=2.322;VQSLOD=2.9740;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:80,0:8:12.04:0,12,219	1/1:6,6:6:9.03:129,9,0	./.	./.	1/1:5,9:10:17.73:225,18,0	0/0:25,0:10:30.10:0,30,548	0/0:37,0:7:18.06:0,18,313	0/0:38,0:4:12.04:0,12,220	1/1:12,9:7:12.04:172,12,0	0/0:30,0:14:42.06:0,42,682	0/0:14,0:7:18.06:0,18,311	0/0:28,0:7:18.06:0,18,329	0/0:26,0:8:24.08:0,24,420	0/0:24,0:12:36.12:0,36,656	1/1:6,10:9:12.04:172,12,0	1/1:6,12:11:24.08:343,24,0	0/0:51,0:15:33.07:0,33,534	0/0:19,0:2:6.02:0,6,110	0/0:31,0:5:12.04:0,12,220	0/0:19,0:12:33.11:0,33,578	0/0:49,0:3:3.01:0,3,55	0/0:22,0:10:30.10:0,30,513	0/0:22,0:10:27.09:0,27,476	0/0:40,0:6:12.04:0,12,219	1/1:4,10:10:24.08:338,24,0	0/0:37,0:12:36.12:0,36,658	0/0:48,0:14:42.14:0,42,766	0/0:11,0:4:12.04:0,12,220
chr10	95167584	.	GT	G	5723.58	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=11.019;DP=480;FS=24.467;HRun=10;HaplotypeScore=76.4407;InbreedingCoeff=0.9786;MQ=71.86;MQ0=0;MQRankSum=0.670;QD=22.36;ReadPosRankSum=2.797;VQSLOD=3.8368;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,1:17:16.04:0,16,397	1/1:0,17:17:50.99:443,51,0	0/0:11,0:11:23.43:0,23,208	0/0:12,0:12:14.44:0,14,209	1/1:3,22:25:65.97:573,66,0	0/0:16,0:16:39.11:0,39,431	0/0:9,0:9:27.06:0,27,290	0/0:8,0:25:43.62:0,44,245	1/1:2,11:13:29.99:260,30,0	1/1:1,32:33:93.58:785,94,0	1/1:1,27:28:80.98:703,81,0	0/0:9,0:10:26.91:0,27,280	0/0:25,0:25:63.10:0,63,671	0/0:9,0:9:24.06:0,24,258	1/1:2,6:8:20.74:168,21,0	1/1:0,6:6:15:130,15,0	0/0:18,0:18:48.09:0,48,517	0/0:13,1:14:7.02:0,7,294	1/1:4,15:19:44.98:391,45,0	1/1:6,21:27:65.46:556,65,0	1/1:1,9:10:23.99:208,24,0	0/0:16,0:16:31.63:0,32,481	0/0:22,0:22:57.11:0,57,599	0/0:7,0:7:18.05:0,18,199	1/1:2,19:21:50.98:443,51,0	1/1:0,17:17:50.97:438,51,0	1/1:6,26:32:71.97:625,72,0	0/0:1,0:12:28.41:0,28,142
chr10	95170545	.	C	CTT	1059.94	PASS	AB=0.625;AC=19;AF=0.352;AN=54;BaseQRankSum=2.323;DP=331;FS=0.000;HRun=12;HaplotypeScore=51.7974;InbreedingCoeff=0.7826;MQ=65.75;MQ0=11;MQRankSum=-1.455;QD=11.16;ReadPosRankSum=-2.292;VQSLOD=0.8157;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:32.95:0,33,294	./.	0/0:6,0:6:8.98:0,9,79	0/0:9,0:9:8.69:0,9,67	0/0:17,0:17:26.91:0,27,250	1/1:4,8:14:23.51:250,24,0	1/1:4,7:11:20.29:239,20,0	1/1:11,0:19:4.03:82,4,0	0/0:13,0:13:23.63:0,24,215	0/0:13,0:14:32.90:0,33,352	0/0:9,0:8:17.98:0,18,167	1/1:3,3:4:6.02:84,6,0	1/1:4,2:7:5.51:51,6,0	1/1:2,9:12:18.02:218,18,0	0/0:11,0:12:35.52:0,36,301	0/0:9,0:9:24.02:0,24,222	0/0:16,0:20:14.62:0,15,279	0/0:18,0:16:10.15:0,10,302	0/0:16,0:18:38.60:0,39,387	0/0:12,0:13:14.65:0,15,123	0/0:8,0:8:14.98:0,15,132	1/1:3,2:5:8.99:104,9,0	1/1:4,4:8:14.94:165,15,0	1/1:1,1:4:2.97:10,3,0	0/0:18,0:18:26.77:0,27,249	0/0:17,0:16:23.11:0,23,216	0/0:15,0:16:35.72:0,36,316	0/1:2,1:5:16.76:48,0,17
chr10	95170994	.	AT	A	1316.86	PASS	AB=0.671;AC=38;AF=0.826;AN=46;BaseQRankSum=0.907;DP=427;FS=8.672;HRun=11;HaplotypeScore=28.0108;InbreedingCoeff=0.3208;MQ=19.26;MQ0=256;MQRankSum=-0.387;QD=3.90;ReadPosRankSum=0.013;VQSLOD=-0.6550;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:15,8:14:21.17:114,0,21	./.	./.	./.	1/1:26,0:4:6.11:18,6,0	1/1:5,7:9:3.31:151,3,0	1/1:7,4:4:8.98:74,9,0	1/1:9,1:4:2.89:16,3,0	1/1:4,0:3:4.07:12,4,0	1/1:43,3:5:8.98:74,9,0	0/0:16,4:3:0:0,0,0	1/1:1,4:4:11.98:98,12,0	1/1:3,10:10:29.97:246,30,0	1/1:5,2:4:8.88:65,9,0	1/1:6,0:6:8.78:32,9,0	0/1:2,0:6:8.58:12,0,9	0/0:28,0:18:36.09:0,36,383	0/0:15,0:8:10.92:0,11,136	1/1:10,4:4:8.99:74,9,0	1/1:16,3:4:2.99:25,3,0	1/1:2,1:3:3.88:27,4,0	1/1:16,1:3:5.99:49,6,0	1/1:29,2:2:2.99:25,3,0	./.	1/1:10,0:3:4.07:11,4,0	1/1:34,6:7:17.97:148,18,0	1/1:11,9:10:20.97:172,21,0	./.
chr10	95171071	.	G	GAT	6169.02	PASS	AB=0.777;AC=25;AF=0.446;AN=56;BaseQRankSum=14.967;DP=538;FS=17.106;HRun=0;HaplotypeScore=93.7731;InbreedingCoeff=-0.7746;MQ=48.88;MQ0=7;MQRankSum=-8.022;QD=12.83;ReadPosRankSum=4.488;VQSLOD=3.5133;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:26,18:42:99:767,0,1050	0/1:4,3:7:83.06:164,0,83	0/0:22,0:12:28.93:0,29,448	0/0:13,0:7:21.07:0,21,325	0/1:13,4:16:99:134,0,541	0/1:20,9:26:99:349,0,713	0/1:14,9:21:99:377,0,527	0/0:22,0:20:60.20:0,60,962	0/1:8,4:14:99:193,0,306	0/1:19,9:27:99:480,0,751	0/1:12,8:20:99:370,0,392	0/1:6,1:9:10.05:10,0,181	0/1:10,3:13:29.62:30,0,410	0/1:8,1:9:35.60:36,0,318	0/1:14,8:25:99:449,0,518	0/1:18,10:29:99:564,0,698	0/1:26,9:37:99:430,0,980	0/1:9,4:12:94.08:94,0,272	0/1:15,1:16:36.86:37,0,600	0/1:18,2:18:68.43:68,0,654	0/1:6,16:22:99:892,0,228	0/1:10,2:12:89.44:89,0,361	0/1:8,2:9:99:120,0,221	0/1:9,3:13:99:171,0,309	0/1:9,0:10:1.03:1,0,318	0/1:16,1:15:14.70:15,0,628	0/1:20,5:24:99:222,0,808	0/1:6,2:8:99:105,0,132
chr10	95171146	.	GA	G	1558.09	PASS	AB=0.732;AC=33;AF=0.589;AN=56;BaseQRankSum=-1.957;DP=377;FS=16.115;HRun=14;HaplotypeScore=56.2207;InbreedingCoeff=0.5668;MQ=44.77;MQ0=21;MQRankSum=0.668;QD=5.99;ReadPosRankSum=1.081;VQSLOD=0.7534;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:24,4:27:25.30:25,0,206	0/0:6,0:7:11.73:0,12,72	0/0:6,0:3:0:0,0,0	0/0:8,0:6:0.54:0,1,21	0/0:7,0:18:28.39:0,28,181	0/1:8,7:15:7.95:89,0,8	1/1:7,7:11:21.12:132,21,0	1/1:6,6:5:11.90:82,12,0	0/0:5,1:14:22.12:0,22,121	1/1:9,9:16:30.78:196,31,0	0/1:5,5:10:1.83:33,0,2	1/1:1,3:4:8.93:62,9,0	1/1:7,4:11:12.94:73,13,0	1/1:4,2:6:10.94:67,11,0	0/0:9,0:12:17.90:0,18,99	0/1:7,1:10:17.73:18,0,82	0/0:21,1:21:13.02:0,13,214	0/0:15,0:12:24.03:0,24,222	1/1:7,4:9:7.50:83,7,0	1/1:7,4:9:13.82:88,14,0	1/1:5,5:10:13.99:104,14,0	1/1:6,4:10:10.48:66,10,0	0/1:2,7:11:0.64:78,0,1	1/1:6,8:14:22.86:150,23,0	0/0:6,0:7:11.58:0,12,65	1/1:8,10:14:22.74:149,23,0	1/1:11,7:16:28.70:187,29,0	1/1:6,6:10:10.95:68,11,0
chr10	95174602	.	CT	C	3075.96	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=9.289;DP=627;FS=0.758;HRun=13;HaplotypeScore=70.9520;InbreedingCoeff=0.7794;MQ=78.39;MQ0=5;MQRankSum=0.840;QD=10.83;ReadPosRankSum=1.561;VQSLOD=3.3720;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,18:27:44.62:328,45,0	0/0:14,0:15:39.01:0,39,365	0/1:29,0:21:13.44:13,0,145	0/0:23,0:18:2.19:0,2,70	0/0:36,2:38:46.26:0,46,670	0/0:19,0:19:45.05:0,45,427	0/0:13,3:16:5.11:0,5,201	1/1:6,14:20:35.74:262,36,0	0/0:22,1:23:20.13:0,20,343	1/1:11,24:35:52.57:513,53,0	1/1:8,13:21:29.67:216,30,0	0/0:14,1:16:14.04:0,14,276	0/0:17,2:19:11.14:0,11,265	0/0:19,2:21:26.15:0,26,407	0/0:20,0:22:6.53:0,7,288	0/0:24,0:24:60.09:0,60,580	0/0:18,1:19:29.15:0,29,434	0/0:13,0:13:8.17:0,8,222	1/1:7,13:23:26.27:269,26,0	1/1:12,19:31:27.33:360,27,0	1/1:5,11:15:0.73:168,1,0	0/0:26,0:26:42.19:0,42,528	0/0:16,0:16:33.04:0,33,317	0/0:11,1:13:2.37:0,2,154	0/0:20,0:20:27.02:0,27,253	1/1:12,22:34:68.47:501,68,0	1/1:5,23:28:56.66:416,57,0	1/1:7,13:20:9.61:233,10,0
chr10	95175207	.	GA	G	1247.36	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.525;DP=646;FS=0.000;HRun=6;HaplotypeScore=59.6278;InbreedingCoeff=0.9999;MQ=84.53;MQ0=0;MQRankSum=0.053;QD=24.46;ReadPosRankSum=-2.904;VQSLOD=1.9122;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.21:0,90,1133	0/0:14,0:14:42.14:0,42,553	0/0:28,0:28:66.21:0,66,843	0/0:18,0:18:35.98:0,36,432	0/0:30,0:30:90.29:0,90,1184	0/0:20,0:20:57.19:0,57,750	0/0:17,0:17:51.17:0,51,667	1/1:4,27:31:81.17:853,81,0	0/0:19,0:19:51.14:0,51,654	0/0:29,0:29:81.25:0,81,1050	0/0:19,0:19:54.17:0,54,698	0/0:23,0:23:66.21:0,66,859	0/0:20,0:20:57.17:0,57,723	0/0:15,0:15:45.14:0,45,579	0/0:13,0:13:39.10:0,39,496	0/0:17,0:17:51.17:0,51,671	0/0:32,0:32:90.28:0,90,1165	0/0:17,0:17:48.09:0,48,580	0/0:32,0:32:81.26:0,81,1052	0/0:23,0:23:69.22:0,69,908	0/0:31,0:31:93.29:0,93,1209	0/0:22,0:22:60.19:0,60,776	0/0:19,0:19:57.19:0,57,750	0/0:26,0:26:69.22:0,69,907	0/0:19,0:19:57.18:0,57,737	0/0:40,0:40:99:0,120,1567	0/0:22,0:22:63.20:0,63,828	1/1:2,18:20:48.12:516,48,0
chr10	95176587	.	ATTC	A	1775.38	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.899;DP=539;FS=0.626;HRun=0;HaplotypeScore=73.6766;InbreedingCoeff=0.9879;MQ=77.15;MQ0=0;MQRankSum=-4.050;QD=44.38;ReadPosRankSum=1.156;VQSLOD=5.1838;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:18.06:0,18,406	0/0:13,0:13:39.13:0,39,880	0/0:15,0:15:30.10:0,30,645	0/0:7,0:8:15.48:0,15,251	0/0:32,0:32:93.22:0,93,1916	0/0:22,0:22:66.21:0,66,1445	0/0:12,0:12:33.11:0,33,744	1/1:0,21:21:63.20:1032,63,0	0/0:13,0:13:36.12:0,36,813	0/0:28,0:28:84.28:0,84,1780	0/0:31,0:31:90.24:0,90,1840	0/0:14,0:14:39.13:0,39,839	0/0:18,0:18:54.17:0,54,1132	0/0:16,0:16:45.15:0,45,1014	0/0:22,0:22:66.23:0,66,1488	0/0:21,0:21:63.22:0,63,1422	0/0:14,0:14:42.07:0,42,828	0/0:18,0:18:51.03:0,51,1052	0/0:24,0:24:69.24:0,69,1506	0/0:24,0:24:72.22:0,72,1539	0/0:15,0:15:45.12:0,45,905	0/0:22,0:22:60.16:0,60,1203	0/0:21,0:21:57.17:0,57,1241	0/0:11,0:11:33.11:0,33,728	0/0:21,0:21:63.20:0,63,1332	0/0:26,0:26:78.27:0,78,1739	0/0:30,0:30:90.28:0,90,1941	1/1:1,18:19:51.17:865,51,0
chr10	95178079	.	CAA	C	8223.71	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-5.825;DP=643;FS=4.253;HRun=3;HaplotypeScore=99.4658;InbreedingCoeff=0.9995;MQ=94.27;MQ0=0;MQRankSum=-2.992;QD=43.74;ReadPosRankSum=3.546;VQSLOD=4.2331;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:87.30:1332,87,0	0/0:8,0:8:24.08:0,24,453	0/0:36,0:36:99:0,105,1921	0/0:22,0:22:65.89:0,66,1145	0/0:21,0:21:60.21:0,60,1153	1/1:0,17:17:48.16:735,48,0	1/1:0,16:16:48.16:735,48,0	0/0:32,0:32:96.32:0,96,1824	0/0:24,0:24:72.25:0,72,1391	0/0:32,0:32:96.33:0,96,1855	0/0:27,0:27:81.27:0,81,1490	1/1:0,23:23:63.21:965,63,0	1/1:1,19:20:51.17:781,51,0	1/1:0,21:21:60.20:919,60,0	0/0:18,0:18:54.17:0,54,994	0/0:25,0:25:72.25:0,72,1391	0/0:14,0:14:42.14:0,42,812	0/0:21,0:21:63.18:0,63,1180	0/0:25,0:25:75.26:0,75,1450	0/0:19,0:19:45.15:0,45,859	0/0:39,0:38:99:0,117,2220	1/1:0,15:15:45.15:689,45,0	1/1:0,24:24:72.24:1103,72,0	1/1:1,21:22:63.21:965,63,0	0/0:21,0:21:57.20:0,57,1090	0/0:27,0:27:81.28:0,81,1566	0/0:35,0:35:99:0,105,1990	0/0:9,0:9:27.09:0,27,522
chr10	95178340	.	CT	C	1590.22	PASS	AB=0.806;AC=28;AF=0.500;AN=56;BaseQRankSum=6.225;DP=550;FS=1.418;HRun=15;HaplotypeScore=61.2640;InbreedingCoeff=0.6823;MQ=67.10;MQ0=2;MQRankSum=0.593;QD=5.78;ReadPosRankSum=4.612;VQSLOD=2.4940;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,5:26:12.39:0,12,341	1/1:6,5:11:5.85:38,6,0	0/0:25,2:10:1.09:0,1,102	0/1:25,0:17:1.67:2,0,84	1/1:15,13:30:14.17:200,14,0	1/1:4,10:15:25.65:160,26,0	1/1:4,6:11:7.86:44,8,0	0/0:29,1:32:31.46:0,31,365	1/1:5,12:17:32.46:211,32,0	0/0:26,1:27:20.44:0,20,277	0/0:22,1:23:22:0,22,282	1/1:5,2:6:7.69:44,8,0	1/1:8,3:11:9.56:56,10,0	1/1:4,9:14:22.68:140,23,0	1/1:2,9:11:14.71:95,15,0	0/1:8,10:18:16.83:140,0,17	0/0:20,0:20:38.98:0,39,339	0/0:25,0:25:36.42:0,36,416	0/1:24,2:26:2.72:3,0,208	0/0:23,1:24:47.93:0,48,414	0/0:15,1:18:6.61:0,7,188	0/1:6,7:13:3.66:98,0,4	1/1:8,12:20:26.28:173,26,0	1/1:8,12:20:23.50:154,24,0	1/1:7,15:24:37.34:236,37,0	0/0:13,0:14:8.16:0,8,100	0/0:20,1:23:23.95:0,24,363	0/0:13,1:14:16.71:0,17,267
chr10	95181240	.	A	AG	1432.36	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.337;DP=435;FS=0.000;HRun=1;HaplotypeScore=39.0497;InbreedingCoeff=0.9623;MQ=89.70;MQ0=0;MQRankSum=-2.090;QD=40.92;ReadPosRankSum=-1.463;VQSLOD=3.1458;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.19:0,57,740	0/0:6,0:6:15.05:0,15,195	0/0:20,0:20:57.13:0,57,705	0/0:15,0:15:10.67:0,11,476	0/0:19,0:19:57.17:0,57,724	0/0:13,0:13:39.13:0,39,506	0/0:6,0:6:18.06:0,18,234	1/1:0,27:27:81.26:1194,81,0	0/0:13,0:13:39.13:0,39,506	0/0:26,0:26:75.24:0,75,964	0/0:19,0:19:57.15:0,57,710	0/0:13,0:13:36.12:0,36,467	0/0:15,0:15:45.15:0,45,584	0/0:10,0:10:27.09:0,27,350	0/0:15,0:15:42.11:0,42,514	0/0:9,0:9:24.08:0,24,312	0/0:14,0:14:36.10:0,36,451	0/0:11,0:11:33.11:0,33,428	0/0:23,0:23:69.21:0,69,883	0/0:20,0:20:57.18:0,57,730	0/0:7,0:7:21.07:0,21,273	0/0:12,0:12:36.10:0,36,453	0/0:15,0:15:45.13:0,45,570	0/0:11,0:11:33.11:0,33,429	0/0:18,0:18:54.18:0,54,701	0/0:15,0:15:45.14:0,45,571	0/0:36,0:36:99:0,108,1366	1/1:0,8:8:24.08:360,24,0
chr10	95184699	.	GA	G	4858.51	PASS	AB=0.729;AC=43;AF=0.768;AN=56;BaseQRankSum=3.154;DP=521;FS=3.428;HRun=12;HaplotypeScore=74.3145;InbreedingCoeff=0.6457;MQ=79.52;MQ0=2;MQRankSum=1.544;QD=11.94;ReadPosRankSum=5.074;VQSLOD=4.9155;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,20:30:16.86:277,17,0	1/1:1,13:14:32.84:255,33,0	0/0:32,2:30:7.24:0,7,300	0/1:9,1:8:14.79:15,0,30	1/1:18,8:28:36.28:237,36,0	1/1:5,11:16:9.38:247,9,0	1/1:1,4:5:8.96:70,9,0	0/0:24,0:25:50.91:0,51,485	1/1:1,16:19:42.92:314,43,0	1/1:11,15:27:37.59:280,38,0	0/1:8,6:14:5.24:87,0,5	1/1:4,11:16:28.92:215,29,0	1/1:0,13:13:23.77:185,24,0	1/1:0,11:11:29.89:232,30,0	0/1:3,9:12:33.82:136,0,34	1/1:4,14:18:11.38:271,11,0	0/0:15,1:16:15.84:0,16,343	0/0:14,0:15:38.91:0,39,379	1/1:10,13:23:10.87:250,11,0	1/1:10,17:27:13.99:281,14,0	1/1:2,9:11:14.94:116,15,0	1/1:6,10:16:29.81:231,30,0	1/1:9,9:18:18.63:158,19,0	1/1:2,8:11:19.93:145,20,0	1/1:9,12:22:28.81:215,29,0	1/1:6,12:18:7.15:224,7,0	1/1:4,22:26:53.78:418,54,0	0/0:21,2:24:17.34:0,17,495
chr10	95197910	.	GT	G	519.43	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=-3.215;DP=332;FS=0.944;HRun=8;HaplotypeScore=184.7210;InbreedingCoeff=0.6562;MQ=31.80;MQ0=0;MQRankSum=2.356;QD=14.04;ReadPosRankSum=-2.651;VQSLOD=1.2169;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:14.62:0,15,87	0/0:14,0:14:23.45:0,23,139	./.	./.	0/0:25,0:22:27.20:0,27,171	0/0:8,0:8:14.79:0,15,111	0/0:3,0:3:5.93:0,6,54	1/1:6,20:22:26.84:356,27,0	0/0:14,0:14:29.22:0,29,191	0/0:14,0:13:22.51:0,23,139	0/0:18,0:18:5.30:0,5,70	0/0:7,0:7:17.50:0,18,115	0/0:7,0:7:18.79:0,19,94	0/0:4,0:4:5.85:0,6,35	0/0:9,0:9:8.81:0,9,54	0/0:11,0:11:26.56:0,27,191	0/0:6,0:6:14.79:0,15,111	0/0:1,0:1:0:0,0,0	0/0:13,0:8:11.92:0,12,98	0/0:31,0:31:63.79:0,64,408	0/0:4,0:4:2.92:0,3,17	0/0:20,0:20:46.43:0,46,321	0/0:15,0:16:36.62:0,37,284	0/0:3,0:3:2.74:0,3,12	0/0:14,0:11:12.14:0,12,58	0/0:21,0:21:46.46:0,46,313	0/0:18,0:18:29.18:0,29,193	1/1:7,4:11:30.03:281,30,0
chr10	95199544	.	GT	G	14053.97	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=2.969;DP=473;FS=9.901;HRun=2;HaplotypeScore=50.8589;InbreedingCoeff=0.9980;MQ=65.64;MQ0=7;MQRankSum=0.822;QD=35.40;ReadPosRankSum=3.275;VQSLOD=4.7590;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,1:12:33.04:0,33,467	1/1:0,8:8:24.08:311,24,0	0/0:18,0:17:48.15:0,48,688	0/0:20,0:19:45.13:0,45,623	1/1:0,21:21:63.20:817,63,0	1/1:0,22:22:63.20:818,63,0	1/1:1,12:13:36.12:467,36,0	1/1:2,26:15:39.11:490,39,0	1/1:0,11:11:33.11:428,33,0	1/1:0,37:37:99:1368,108,0	1/1:0,19:19:45.15:584,45,0	1/1:0,10:10:27.09:350,27,0	1/1:1,17:18:48.16:622,48,0	1/1:0,20:20:60.20:778,60,0	1/1:0,16:16:45.15:584,45,0	1/1:0,16:16:48.16:623,48,0	0/0:9,0:9:24.08:0,24,360	0/0:16,1:16:48.08:0,48,668	1/1:0,16:15:42.01:529,42,0	1/1:0,23:23:69.22:891,69,0	1/1:0,22:22:66.21:857,66,0	1/1:0,17:17:48.16:621,48,0	1/1:1,10:11:27.09:350,27,0	1/1:0,11:11:30.10:389,30,0	1/1:0,10:10:27.09:350,27,0	1/1:0,22:22:66.21:854,66,0	1/1:0,14:14:42.14:545,42,0	1/1:1,11:12:33.11:428,33,0
chr10	95200652	.	CT	C	1538.32	PASS	AB=0.900;AC=17;AF=0.304;AN=56;BaseQRankSum=8.979;DP=390;FS=1.077;HRun=9;HaplotypeScore=40.2839;InbreedingCoeff=0.8817;MQ=70.64;MQ0=0;MQRankSum=-0.542;QD=18.10;ReadPosRankSum=2.307;VQSLOD=3.4343;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:57.17:0,57,658	0/0:7,0:7:18.05:0,18,208	0/1:8,1:6:10.43:10,0,87	0/0:9,0:8:11.71:0,12,115	0/0:16,0:16:48.12:0,48,535	1/1:1,17:18:48.02:439,48,0	1/1:0,6:6:15.01:137,15,0	0/0:26,0:26:63.19:0,63,726	0/0:11,0:11:24.06:0,24,268	0/0:14,0:14:39.12:0,39,450	0/0:18,0:18:45.11:0,45,501	1/1:1,12:13:36.02:329,36,0	1/1:1,11:12:33.02:302,33,0	1/1:0,10:10:21.01:192,21,0	0/0:7,0:7:21.06:0,21,242	0/0:10,0:10:27.08:0,27,312	0/0:18,0:18:45.13:0,45,519	0/0:13,0:13:33.07:0,33,368	0/0:23,0:23:60.17:0,60,683	0/0:21,0:21:51.62:0,52,589	0/0:7,0:7:18.05:0,18,208	1/1:0,4:4:9:82,9,0	1/1:1,9:10:21.01:192,21,0	1/1:1,2:3:6:55,6,0	0/0:19,0:19:54.15:0,54,614	0/0:22,0:22:60.18:0,60,692	0/0:22,0:23:63.02:0,63,707	0/0:18,0:18:39.12:0,39,450
chr10	95200935	.	AACACAC	A	1271.36	PASS	AB=0.990;AC=20;AF=0.357;AN=56;BaseQRankSum=1.511;DP=442;FS=11.005;HRun=0;HaplotypeScore=107.0919;InbreedingCoeff=0.1377;MQ=65.44;MQ0=10;MQRankSum=-6.941;QD=7.10;ReadPosRankSum=-1.640;VQSLOD=1.1827;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:33:36.08:0,36,755	1/1:3,2:5:3.01:61,3,0	0/0:22,0:10:3.01:0,3,40	0/0:37,0:16:3.48:0,3,37	1/1:7,3:10:2.84:42,3,0	0/0:14,0:14:6.72:0,7,195	0/1:11,0:12:27.70:28,0,34	0/0:17,0:17:9.02:0,9,132	1/1:9,2:13:9.90:149,10,0	0/0:18,0:18:0.97:0,1,230	0/1:17,0:17:99:105,0,133	0/0:10,0:10:2.73:0,3,25	0/1:17,0:17:12.85:95,0,13	0/0:14,0:13:2.14:0,2,9	1/1:9,2:13:9.03:164,9,0	1/1:7,3:12:12.04:206,12,0	0/0:20,0:22:27.06:0,27,618	0/0:15,0:15:21.03:0,21,489	0/0:6,0:6:3.48:0,3,12	0/1:11,0:11:43.35:121,0,43	0/0:39,0:39:41.69:0,42,416	0/1:12,0:12:39.40:39,0,42	0/0:7,0:7:6.02:0,6,100	0/1:14,0:13:44.35:44,0,52	1/1:11,3:17:15.05:266,15,0	0/1:15,0:15:32.56:33,0,177	0/1:10,0:10:27.44:86,0,27	0/0:8,0:8:19.61:0,20,277
chr10	95200972	.	ACACACC	A	4473.16	PASS	AB=0.974;AC=27;AF=0.482;AN=56;BaseQRankSum=1.994;DP=563;FS=10.951;HRun=0;HaplotypeScore=118.5713;InbreedingCoeff=0.0169;MQ=61.60;MQ0=21;MQRankSum=-1.979;QD=11.56;ReadPosRankSum=2.373;VQSLOD=3.1010;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:69.85:0,70,1159	0/1:8,0:8:20.23:20,0,132	0/0:24,0:14:34.82:0,35,349	0/0:40,0:15:31.19:0,31,351	0/0:13,0:13:10.28:0,10,207	0/1:19,1:18:50.73:82,0,51	1/1:24,0:24:50.13:385,50,0	0/1:21,0:20:52.65:273,0,53	0/1:16,0:16:48.16:48,0,219	0/1:23,0:23:19.97:303,0,20	0/1:16,3:19:36.81:323,0,37	0/0:14,0:14:0.17:0,0,1	1/1:18,2:20:17.11:198,17,0	1/1:15,0:14:5.06:22,5,0	0/1:14,0:14:66.46:66,0,250	0/1:13,0:13:99:108,0,135	0/0:23,0:22:48.01:0,48,947	0/0:19,0:19:51.02:0,51,870	1/1:10,0:10:21.56:190,22,0	1/1:18,2:19:5.91:235,6,0	0/1:58,0:58:61.77:716,0,62	1/1:16,2:18:42.39:348,42,0	0/1:12,0:11:47.11:137,0,47	0/1:13,2:14:8.25:90,0,8	0/1:19,0:18:99:168,0,211	0/1:23,1:24:27.85:420,0,28	1/1:17,1:18:36.09:342,36,0	0/0:11,0:10:18.38:0,18,138
chr10	95200974	.	ACACC	A	6360.97	PASS	AB=0.895;AC=32;AF=0.571;AN=56;BaseQRankSum=1.480;DP=556;FS=18.538;HRun=0;HaplotypeScore=95.0798;InbreedingCoeff=0.6424;MQ=62.78;MQ0=21;MQRankSum=-2.138;QD=17.72;ReadPosRankSum=1.589;VQSLOD=3.2642;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:64.59:0,65,810	0/0:8,0:8:12.15:0,12,145	0/0:24,0:14:31.88:0,32,331	0/0:38,0:16:24.49:0,24,330	0/0:13,0:13:23.73:0,24,221	0/1:5,13:16:3.93:289,0,4	1/1:23,2:25:59.47:552,59,0	1/1:21,1:21:43.37:352,43,0	0/0:16,0:16:1.66:0,2,215	1/1:19,4:23:56.86:642,57,0	1/1:14,5:19:12.91:422,13,0	0/0:0,14:14:0.04:0,0,0	1/1:2,18:20:18.06:313,18,0	1/1:1,15:15:6.02:112,6,0	0/0:14,0:14:10.73:0,11,239	0/1:13,0:13:15.32:15,0,137	0/0:21,0:20:44.98:0,45,632	0/0:20,0:20:56.93:0,57,678	1/1:11,0:11:25.16:256,25,0	1/1:6,15:20:18.57:246,19,0	1/1:53,5:58:92.57:1278,93,0	1/1:15,3:18:45.87:475,46,0	1/1:12,0:11:23.03:182,23,0	1/1:4,9:12:9.03:159,9,0	0/1:19,0:18:10.80:11,0,215	1/1:20,3:23:45.48:598,45,0	1/1:15,2:17:41.95:434,42,0	0/1:11,0:10:11.50:25,0,12
chr10	95200976	.	ACC	A	5064.49	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=0.400;DP=543;FS=18.471;HRun=5;HaplotypeScore=82.4890;InbreedingCoeff=0.9372;MQ=65.25;MQ0=19;MQRankSum=-0.152;QD=15.54;ReadPosRankSum=-0.070;VQSLOD=1.1829;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:28.80:0,29,497	0/0:8,0:8:20.01:0,20,159	0/0:25,0:15:34.89:0,35,361	0/0:35,0:15:24.49:0,24,330	0/0:15,0:15:38.46:0,38,286	1/1:16,0:15:17.93:146,18,0	1/1:24,0:24:57:445,57,0	1/1:2,22:23:65.75:532,66,0	0/0:17,0:17:41.57:0,42,304	1/1:20,0:20:53.70:455,54,0	1/1:16,1:17:38.83:333,39,0	0/1:14,0:14:0:0,0,0	1/1:20,0:20:17.99:153,18,0	1/1:16,0:15:5.96:46,6,0	0/0:15,0:15:38.90:0,39,309	0/0:13,0:13:21.98:0,22,177	0/0:21,0:20:38.83:0,39,364	0/0:21,0:21:59.09:0,59,548	1/1:11,0:11:25.75:224,26,0	1/1:21,0:20:15.83:132,16,0	1/1:51,0:52:99:1002,128,0	1/1:18,0:18:45.97:363,46,0	1/1:10,0:9:23.43:182,23,0	1/1:13,0:12:9:79,9,0	0/0:19,0:18:39.80:0,40,284	1/1:23,0:23:62.61:531,63,0	1/1:17,0:17:39.38:316,39,0	1/1:4,6:9:9.03:125,9,0
chr10	95202249	.	GT	G	2108.32	PASS	AB=0.600;AC=19;AF=0.339;AN=56;BaseQRankSum=8.394;DP=376;FS=7.622;HRun=10;HaplotypeScore=39.6663;InbreedingCoeff=0.8397;MQ=67.85;MQ0=1;MQRankSum=1.459;QD=17.87;ReadPosRankSum=-1.622;VQSLOD=3.2492;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:47.16:0,47,503	0/0:7,0:7:21.06:0,21,232	0/0:14,0:7:12:0,12,115	0/0:10,0:7:13.89:0,14,83	0/0:21,0:21:54.12:0,54,586	1/1:2,13:15:29.99:260,30,0	1/1:2,8:10:14.99:130,15,0	1/1:8,23:30:68.92:591,69,0	0/0:8,0:8:20.73:0,21,211	0/0:13,0:13:33.09:0,33,364	0/0:18,0:18:54.14:0,54,590	1/1:1,6:7:17.99:156,18,0	1/1:0,11:11:32.99:287,33,0	1/1:0,4:4:12:104,12,0	0/0:13,0:13:39.09:0,39,422	0/0:8,1:9:3.59:0,4,234	0/0:13,0:13:30.05:0,30,330	0/0:16,0:16:30.36:0,30,347	0/0:15,0:14:39.10:0,39,422	0/0:22,0:24:62.83:0,63,651	0/0:3,0:3:6.02:0,6,66	0/1:1,2:3:24.11:43,0,24	1/1:1,20:21:56.98:493,57,0	1/1:1,4:5:9:78,9,0	0/0:18,0:18:53.63:0,54,573	0/0:11,1:12:7.02:0,7,296	0/0:26,0:26:72.19:0,72,791	1/1:3,8:11:14.21:173,14,0
chr10	95205433	.	AT	A	3162.22	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.318;DP=611;FS=1.199;HRun=9;HaplotypeScore=59.3995;InbreedingCoeff=0.9872;MQ=71.84;MQ0=0;MQRankSum=-0.679;QD=23.08;ReadPosRankSum=1.379;VQSLOD=4.5408;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,1:19:20.68:0,21,492	1/1:0,7:7:21.01:192,21,0	0/0:9,0:9:16.58:0,17,211	0/0:13,0:13:11.55:0,12,264	1/1:3,34:37:99:934,102,0	0/0:28,0:28:84.21:0,84,947	0/0:12,0:12:30.05:0,30,332	0/0:37,0:37:84.13:0,84,952	1/1:4,20:24:60.03:549,60,0	0/0:26,0:26:69.20:0,69,790	0/0:25,0:26:63.02:0,63,707	0/0:13,0:13:36.11:0,36,415	0/0:19,0:19:54.16:0,54,622	0/0:21,0:21:63.19:0,63,727	1/1:2,15:17:45.02:412,45,0	1/1:3,28:31:81.04:741,81,0	0/0:22,0:22:57.10:0,57,629	0/0:26,0:26:63.17:0,63,714	0/0:17,0:18:44.94:0,45,487	0/0:33,0:33:96.29:0,96,1108	0/0:8,0:10:29.75:0,30,306	0/0:28,0:28:72.21:0,72,831	0/0:27,0:27:78.17:0,78,867	0/0:17,0:17:41.15:0,41,457	1/1:0,21:21:57.03:522,57,0	0/0:36,0:36:87.26:0,87,1004	0/0:27,0:27:81.24:0,81,935	0/0:7,0:7:18.05:0,18,208
chr10	95206040	.	CA	C	852.43	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.034;DP=553;FS=0.000;HRun=6;HaplotypeScore=51.9921;InbreedingCoeff=0.9422;MQ=76.95;MQ0=0;MQRankSum=-0.918;QD=23.68;ReadPosRankSum=-2.232;VQSLOD=2.1587;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.15:0,51,656	0/0:6,0:6:18.06:0,18,237	0/0:23,0:23:56.96:0,57,659	0/0:9,0:9:6.64:0,7,110	0/0:23,0:23:63.20:0,63,829	0/0:23,0:23:69.21:0,69,894	0/0:13,0:13:36.10:0,36,459	1/1:3,22:25:63.11:652,63,0	0/0:17,0:17:48.16:0,48,632	0/0:22,0:21:63.16:0,63,809	0/0:19,0:19:51.17:0,51,671	0/0:22,0:22:54.17:0,54,698	0/0:16,0:16:48.16:0,48,632	0/0:25,0:25:66.16:0,66,844	0/0:26,0:26:72.22:0,72,934	0/0:15,0:15:45.13:0,45,577	0/0:31,0:31:93.28:0,93,1192	0/0:15,0:15:45.15:0,45,589	0/0:18,0:18:42.13:0,42,539	0/0:33,0:33:96.30:0,96,1249	0/0:29,0:29:84.26:0,84,1091	0/0:21,0:21:57.17:0,57,732	0/0:16,0:16:48.16:0,48,631	0/0:6,0:6:14.95:0,15,159	0/0:19,0:19:57.19:0,57,749	0/0:22,0:22:63.19:0,63,805	0/0:30,0:30:87.26:0,87,1115	1/1:0,11:11:30.08:322,30,0
chr10	95206229	.	CGT	C	281.68	PASS	AB=0.976;AC=19;AF=0.396;AN=48;BaseQRankSum=2.988;DP=506;FS=0.946;HRun=0;HaplotypeScore=59.5915;InbreedingCoeff=0.2205;MQ=66.40;MQ0=16;MQRankSum=-0.217;QD=1.26;ReadPosRankSum=-0.403;VQSLOD=1.4653;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:2.81:0,3,175	0/0:8,0:11:3:0,3,27	./.	./.	0/0:16,0:14:5.97:0,6,52	1/1:19,0:19:2.58:14,3,0	1/1:16,0:14:20.93:178,21,0	0/0:26,0:25:1.25:0,1,3	0/0:7,0:7:6.01:0,6,66	0/1:12,0:12:17.96:26,0,18	1/1:14,0:14:3.47:11,3,0	1/1:12,1:13:5.84:41,6,0	1/1:8,0:8:5.95:42,6,0	./.	0/0:6,0:6:3:0,3,25	0/0:9,0:9:6:0,6,53	0/1:26,4:30:7.97:8,0,213	0/0:18,6:24:4.05:0,4,321	0/1:15,0:14:13.48:13,0,47	0/0:12,0:12:0.01:0,0,12	0/1:45,0:43:27.97:28,0,68	0/1:14,0:12:0:0,0,0	./.	1/1:24,0:23:2.86:24,3,0	0/0:16,0:16:14.99:0,15,141	0/0:15,0:15:2.92:0,3,17	1/1:13,0:13:5.78:35,6,0	0/0:8,0:8:1.80:0,2,19
chr10	95206273	.	TGTGTGTGC	T	1582.30	PASS	AB=0.994;AC=16;AF=0.320;AN=50;BaseQRankSum=-0.014;DP=517;FS=12.644;HRun=0;HaplotypeScore=100.1494;InbreedingCoeff=0.0548;MQ=53.66;MQ0=29;MQRankSum=2.787;QD=6.30;ReadPosRankSum=-1.688;VQSLOD=0.6553;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:36:99:240,0,734	0/0:9,0:9:9.02:0,9,220	./.	./.	0/0:16,0:14:12.03:0,12,248	1/1:19,0:18:2.88:27,3,0	1/1:26,0:23:20.17:285,20,0	0/1:25,0:20:35.41:165,0,35	0/0:5,0:5:12.01:0,12,277	0/1:20,0:18:99:183,0,273	0/1:22,0:22:99:109,0,139	1/1:4,8:13:5.98:112,6,0	0/1:6,0:6:4.77:114,0,5	./.	0/0:5,0:5:11.95:0,12,155	0/0:10,0:10:17.96:0,18,281	0/0:32,0:31:42.08:0,42,1300	0/0:31,0:29:68.79:0,69,1753	0/1:19,0:17:94.35:94,0,313	0/1:16,0:16:83.97:84,0,250	0/0:47,0:44:27.15:0,27,555	0/0:18,0:16:2.62:0,3,25	0/1:16,1:16:0:1,0,0	0/0:36,0:34:8.91:0,9,84	0/0:19,0:19:15.03:0,15,731	0/1:20,0:17:99:200,0,165	0/0:22,0:21:17.30:0,17,194	0/1:10,0:9:45.71:121,0,46
chr10	95206275	.	TGTGTGC	T	2182.17	PASS	AB=0.950;AC=19;AF=0.380;AN=50;BaseQRankSum=-1.251;DP=505;FS=18.494;HRun=0;HaplotypeScore=85.9604;InbreedingCoeff=0.2352;MQ=54.11;MQ0=29;MQRankSum=1.336;QD=8.20;ReadPosRankSum=0.025;VQSLOD=0.5715;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:36:99:242,0,452	0/0:9,0:9:9.02:0,9,168	./.	./.	0/0:16,0:14:12.01:0,12,175	1/1:2,17:18:2.59:72,3,0	1/1:24,0:21:39.84:516,40,0	1/1:26,0:21:9.26:220,9,0	0/0:5,0:5:12.01:0,12,224	0/1:19,0:17:99:189,0,103	0/1:21,0:21:0.32:227,0,0	1/1:13,0:13:6.16:125,6,0	1/1:6,0:6:17.94:169,18,0	./.	0/0:5,0:5:11.95:0,12,116	0/0:11,0:11:17.97:0,18,231	0/0:31,0:30:35.93:0,36,939	0/0:31,0:29:67.61:0,68,1309	0/1:20,0:18:95.60:96,0,162	0/1:14,0:14:91.30:131,0,91	0/0:44,0:41:22.11:0,22,291	0/0:9,8:15:2.82:0,3,25	0/1:3,13:15:0:0,0,0	0/0:9,27:34:2.98:0,3,23	0/0:18,0:18:32.69:0,33,566	0/1:19,0:16:40.63:232,0,41	0/1:21,0:20:1.29:1,0,67	0/1:10,0:9:19.12:122,0,19
chr10	95206279	.	TGC	T	2519.09	PASS	AB=0.813;AC=29;AF=0.537;AN=54;BaseQRankSum=-1.513;DP=496;FS=5.926;HRun=0;HaplotypeScore=63.7095;InbreedingCoeff=0.6244;MQ=58.09;MQ0=27;MQRankSum=-0.827;QD=7.39;ReadPosRankSum=-1.695;VQSLOD=2.1056;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:38:44.50:373,44,0	0/0:8,0:9:6:0,6,52	0/0:1,0:1:0.89:0,1,2	0/0:2,0:3:0:0,0,0	0/0:7,0:15:8.99:0,9,77	1/1:19,0:18:3:26,3,0	1/1:23,0:20:32.97:290,33,0	1/1:11,0:20:32.80:250,33,0	0/0:5,0:5:9:0,9,98	1/1:19,0:17:38.75:325,39,0	1/1:22,0:22:41.67:328,42,0	1/1:13,0:13:5.99:51,6,0	1/1:6,0:6:11.92:89,12,0	./.	0/0:5,0:5:8.94:0,9,66	0/0:9,0:9:14.96:0,15,140	0/0:29,0:28:20.51:0,21,401	0/0:30,0:28:17.53:0,18,420	0/1:15,6:19:14.09:140,0,14	1/1:14,0:14:26.90:213,27,0	0/1:19,20:36:9.63:41,0,10	0/0:16,0:15:2.75:0,3,25	0/1:16,0:15:0.12:0,0,0	1/1:35,0:33:2.80:13,3,0	0/0:16,0:16:26.33:0,26,221	1/1:20,0:17:44.85:372,45,0	1/1:4,17:20:6.01:64,6,0	1/1:9,0:8:17.85:126,18,0
chr10	95206341	.	CTTTTG	C	674.53	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.797;DP=618;FS=5.412;HRun=0;HaplotypeScore=121.2574;InbreedingCoeff=0.9385;MQ=73.13;MQ0=0;MQRankSum=-1.152;QD=21.76;ReadPosRankSum=-3.241;VQSLOD=2.5460;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,99,2752	0/0:6,0:6:18.06:0,18,527	0/0:19,0:19:39.03:0,39,1020	0/0:24,0:23:48.13:0,48,1277	0/0:30,0:30:81.28:0,81,2238	0/0:14,0:14:27.09:0,27,791	0/0:14,0:13:30.09:0,30,778	1/1:12,14:26:42.09:671,42,0	0/0:22,0:22:60.21:0,60,1720	0/0:26,0:26:66.22:0,66,1872	0/0:19,0:19:51.17:0,51,1417	0/0:27,0:27:75.26:0,75,2199	0/0:17,0:17:51.18:0,51,1495	0/0:21,0:21:51.18:0,51,1487	0/0:17,0:17:45.15:0,45,1299	0/0:20,0:20:54.19:0,54,1583	0/0:26,0:26:66.23:0,66,1905	0/0:17,0:17:42.14:0,42,1185	0/0:28,0:28:54.19:0,54,1565	0/0:25,0:25:69.24:0,69,2004	0/0:29,0:29:72.25:0,72,2061	0/0:22,0:22:60.20:0,60,1613	0/0:24,0:24:60.15:0,60,1641	0/0:31,0:31:66.17:0,66,1866	0/0:20,0:20:54.19:0,54,1583	0/0:21,0:21:51.18:0,51,1456	0/0:29,0:28:68.85:0,69,2000	1/1:2,3:5:6.02:116,6,0
chr10	95207454	.	TAA	T	6393.24	PASS	AB=0.786;AC=42;AF=0.750;AN=56;BaseQRankSum=-4.193;DP=473;FS=0.000;HRun=14;HaplotypeScore=65.7040;InbreedingCoeff=0.7987;MQ=69.61;MQ0=4;MQRankSum=1.696;QD=18.06;ReadPosRankSum=2.872;VQSLOD=4.1550;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:26:54.04:0,54,528	1/1:1,6:7:18.02:167,18,0	0/1:13,0:11:21.53:55,0,22	0/0:5,0:5:7.87:0,8,30	1/1:5,18:27:49.16:468,49,0	1/1:0,14:16:35.65:364,36,0	1/1:3,12:15:26.98:250,27,0	0/0:27,0:30:62.08:0,62,715	1/1:3,8:11:14.83:186,15,0	1/1:6,13:19:35.95:333,36,0	0/1:6,17:24:1.09:388,0,1	1/1:0,13:14:29.90:324,30,0	1/1:1,6:7:18.01:166,18,0	1/1:3,12:15:26.99:250,27,0	1/1:4,10:15:26.70:233,27,0	1/1:0,10:10:30.03:278,30,0	0/0:3,1:20:5.72:0,6,92	0/0:4,0:23:47.93:0,48,198	1/1:5,11:18:29.58:303,30,0	1/1:1,19:23:47.51:522,48,0	1/1:2,5:7:11.99:111,12,0	1/1:1,12:14:29.86:324,30,0	1/1:3,11:16:28.17:244,28,0	1/1:3,12:15:36.01:333,36,0	1/1:3,17:22:26.49:328,26,0	1/1:4,21:26:50.84:518,51,0	1/1:3,15:17:26.93:250,27,0	0/0:13,0:15:44.61:0,45,565
chr10	95211747	.	T	TTTTTG	1123.24	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-4.121;DP=504;FS=4.111;HRun=0;HaplotypeScore=92.7656;InbreedingCoeff=0.6983;MQ=70.47;MQ0=2;MQRankSum=-0.200;QD=15.60;ReadPosRankSum=-3.751;VQSLOD=2.0455;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:36.12:0,36,650	0/0:8,0:8:21.07:0,21,387	0/0:33,0:20:2.78:0,3,102	0/1:33,0:13:56.51:57,0,173	0/0:22,0:22:60.15:0,60,1037	0/0:23,0:23:60.21:0,60,1106	0/0:10,0:10:21:0,21,292	1/1:12,9:25:33.01:606,33,0	0/0:15,0:15:38.97:0,39,585	0/0:24,0:24:33.09:0,33,519	0/0:18,0:18:45.13:0,45,771	0/0:8,0:8:15.05:0,15,277	0/0:19,0:19:42.11:0,42,678	0/0:12,0:12:27.08:0,27,462	0/0:23,0:23:57.02:0,57,915	0/0:9,0:9:21.06:0,21,358	0/0:16,0:16:36.12:0,36,664	0/0:15,0:15:36.08:0,36,599	0/0:23,0:23:27.07:0,27,413	0/0:32,0:32:69.20:0,69,1130	0/0:5,0:5:12.04:0,12,203	0/0:9,0:9:18.03:0,18,291	0/0:17,0:17:33.04:0,33,533	0/0:11,0:11:27.08:0,27,463	0/0:27,0:27:69.22:0,69,1213	0/0:22,0:22:51.14:0,51,820	0/0:16,0:16:33.10:0,33,574	1/1:4,8:14:21.06:589,21,0
chr10	95211880	.	CAT	C	164.03	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=4.760;DP=539;FS=2.116;HRun=0;HaplotypeScore=70.1987;InbreedingCoeff=-0.1365;MQ=47.29;MQ0=19;MQRankSum=-2.923;QD=0.70;ReadPosRankSum=-2.310;VQSLOD=1.3253;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:38:31.64:32,0,548	0/0:8,0:6:11.97:0,12,97	0/0:33,0:4:11.81:0,12,99	0/0:21,0:2:5.86:0,6,38	0/0:24,0:20:3.24:0,3,93	0/1:26,0:25:3.24:3,0,129	0/1:21,0:16:22.77:23,0,207	1/1:3,0:1:2.98:21,3,0	0/0:19,0:19:35.96:0,36,386	0/0:18,1:17:44.26:0,44,422	0/0:11,0:8:5.99:0,6,50	0/0:17,0:16:18.03:0,18,159	0/0:22,0:21:26.66:0,27,203	0/0:18,0:18:5.96:0,6,186	0/0:15,0:15:21.37:0,21,167	0/0:17,0:17:21.70:0,22,158	0/1:25,0:25:30.96:31,0,479	0/0:29,0:27:59.15:0,59,663	0/1:15,0:12:21.85:22,0,229	0/1:26,0:24:99:105,0,132	0/1:24,0:23:4.52:5,0,144	0/0:11,5:14:8.92:0,9,75	0/0:9,0:8:5.99:0,6,50	0/1:31,0:29:17.88:18,0,311	0/0:12,0:10:13.23:0,13,90	0/1:20,0:18:5.10:5,0,275	0/0:15,0:15:19.80:0,20,191	0/1:3,0:3:14.62:39,0,15
chr10	95211882	.	TACAC	T	100.46	PASS	AB=0.819;AC=11;AF=0.229;AN=48;BaseQRankSum=2.611;DP=577;FS=1.357;HRun=0;HaplotypeScore=88.6034;InbreedingCoeff=0.1381;MQ=47.65;MQ0=22;MQRankSum=-1.803;QD=0.70;ReadPosRankSum=1.119;VQSLOD=1.6761;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:38:27.02:0,27,413	./.	./.	./.	0/1:20,4:21:12.98:40,0,13	0/0:25,0:25:14.96:0,15,179	0/0:23,0:17:6.01:0,6,60	./.	0/0:20,0:20:15.02:0,15,257	0/1:13,0:18:19.91:33,0,20	1/1:6,0:8:2.70:7,3,0	0/0:15,0:16:5.68:0,6,100	0/0:23,0:22:12.76:0,13,134	0/0:18,0:18:5.76:0,6,72	0/1:13,5:18:14.08:39,0,14	1/1:11,6:17:3.90:48,4,0	0/0:29,0:29:39.65:0,40,590	0/0:32,0:31:44.70:0,45,605	0/0:18,0:14:16.81:0,17,216	0/0:22,1:24:11.40:0,11,64	0/0:16,0:25:8.72:0,9,58	1/1:16,0:14:0.47:1,0,0	0/0:8,0:15:1.55:0,2,4	0/0:31,0:31:24:0,24,314	0/1:9,5:12:15.98:40,0,16	0/1:21,0:19:15.40:15,0,75	0/0:11,0:16:6.62:0,7,38	0/0:3,0:3:2.74:0,3,12
chr10	95213649	.	ATGG	A	5193.61	PASS	AB=0.630;AC=45;AF=0.865;AN=52;BaseQRankSum=5.105;DP=695;FS=18.719;HRun=0;HaplotypeScore=94.9843;InbreedingCoeff=0.5479;MQ=61.49;MQ0=21;MQRankSum=0.974;QD=8.92;ReadPosRankSum=1.372;VQSLOD=2.9671;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:0.47:0,0,1	1/1:4,13:17:18.05:247,18,0	./.	./.	1/1:10,3:13:6.02:82,6,0	1/1:12,9:21:18.06:246,18,0	1/1:16,21:37:20.83:260,21,0	1/1:13,0:9:2.97:20,3,0	1/1:11,23:35:29.92:395,30,0	1/1:14,11:25:29.03:262,29,0	1/1:11,3:13:2.88:41,3,0	0/1:12,17:29:3.63:264,0,4	1/1:9,32:41:48.05:634,48,0	1/1:12,23:35:27.09:371,27,0	1/1:12,19:31:18.06:247,18,0	1/1:13,16:29:9.03:124,9,0	0/0:27,0:26:45.08:0,45,746	0/0:19,0:19:47.99:0,48,775	1/1:13,4:15:11.38:113,11,0	1/1:17,8:25:8.99:123,9,0	1/1:28,31:56:26.65:369,27,0	1/1:9,10:19:8.48:123,8,0	1/1:9,5:13:2.60:41,3,0	1/1:4,17:20:21.07:288,21,0	1/1:12,16:26:18.06:247,18,0	1/1:18,11:28:33:373,33,0	1/1:8,15:23:17.78:241,18,0	1/1:4,3:6:6.02:82,6,0
chr10	95216020	.	C	CCG	516.46	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.980;DP=465;FS=10.063;HRun=0;HaplotypeScore=59.0805;InbreedingCoeff=0.9120;MQ=56.49;MQ0=18;MQRankSum=-5.920;QD=27.18;ReadPosRankSum=-2.527;VQSLOD=3.6103;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:47:99:0,129,1953	0/0:4,0:4:9.03:0,9,138	0/0:6,0:4:8.86:0,9,101	0/0:8,0:6:15.05:0,15,219	0/0:33,0:31:81.25:0,81,1198	0/0:18,0:18:51.14:0,51,756	0/0:20,0:19:51.17:0,51,780	1/1:6,9:11:29.84:444,30,0	0/0:13,0:13:36.12:0,36,550	0/0:21,0:20:57.16:0,57,846	0/0:14,0:13:36.12:0,36,551	0/0:14,0:13:39.13:0,39,597	0/0:15,0:15:45.15:0,45,688	0/0:11,0:10:30.10:0,30,459	0/0:10,0:9:27.09:0,27,413	0/0:8,0:8:24.08:0,24,367	0/0:49,0:46:99:0,135,1995	0/0:17,0:14:39.11:0,39,574	0/0:14,0:14:39.06:0,39,546	0/0:13,0:13:27.08:0,27,393	0/0:18,0:18:48.10:0,48,666	0/0:7,0:7:18.06:0,18,275	0/0:11,0:11:27.07:0,27,391	0/0:25,0:24:66.20:0,66,969	0/0:18,0:18:51.17:0,51,781	0/0:15,0:15:45.13:0,45,657	0/0:14,0:13:39.13:0,39,595	1/1:0,4:4:12.04:189,12,0
chr10	95216025	.	CCCG	C	574.55	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.268;DP=491;FS=14.072;HRun=0;HaplotypeScore=69.4916;InbreedingCoeff=0.9419;MQ=60.27;MQ0=13;MQRankSum=-5.616;QD=28.73;ReadPosRankSum=-0.606;VQSLOD=2.6791;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:50:99:0,141,3296	0/0:3,0:3:9.03:0,9,212	0/0:9,0:6:16.61:0,17,346	0/0:10,0:8:24.08:0,24,548	0/0:36,0:34:93.32:0,93,2161	0/0:19,0:19:54.19:0,54,1252	0/0:21,0:20:54.14:0,54,1194	1/1:4,12:12:36.11:520,36,0	0/0:16,0:16:45.15:0,45,1048	0/0:21,0:20:60.21:0,60,1395	0/0:12,0:12:36.12:0,36,842	0/0:14,0:13:36.08:0,36,800	0/0:16,0:16:45.15:0,45,1034	0/0:11,0:10:30.10:0,30,704	0/0:11,0:10:24.08:0,24,567	0/0:8,0:8:24.08:0,24,566	0/0:50,0:48:99:0,141,3265	0/0:16,0:15:42.14:0,42,983	0/0:17,0:17:51.14:0,51,1044	0/0:12,0:12:33.11:0,33,760	0/0:23,0:23:66.23:0,66,1504	0/0:6,0:6:18.02:0,18,374	0/0:16,0:16:42.14:0,42,940	0/0:26,0:25:69.19:0,69,1578	0/0:18,0:18:54.19:0,54,1276	0/0:15,0:15:45.15:0,45,1054	0/0:13,0:13:39.13:0,39,902	1/1:0,4:4:12.04:171,12,0
chr10	95217323	.	GGAGA	G	572.89	PASS	AB=1.000;AC=11;AF=0.275;AN=40;BaseQRankSum=3.780;DP=152;FS=9.238;HRun=0;HaplotypeScore=33.2929;InbreedingCoeff=0.6367;MQ=73.92;MQ0=15;MQRankSum=-3.674;QD=24.91;ReadPosRankSum=0.396;VQSLOD=1.7554;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:66.13:0,66,1326	./.	0/0:17,0:5:15.04:0,15,230	0/0:23,0:16:35.20:0,35,611	0/0:3,0:3:9.02:0,9,145	0/0:2,0:1:3.01:0,3,72	0/0:4,0:4:12.04:0,12,266	0/0:15,0:13:39.05:0,39,717	0/0:8,0:6:14.82:0,15,289	1/1:0,2:2:6.02:96,6,0	./.	./.	0/0:3,0:2:6.01:0,6,99	0/1:3,0:3:2.48:2,0,86	0/0:3,0:2:6.01:0,6,99	1/1:2,7:8:15.48:220,15,0	0/0:7,0:7:20.99:0,21,290	0/0:8,0:8:17.28:0,17,406	1/1:1,5:6:15.04:239,15,0	1/1:0,1:1:3.01:54,3,0	./.	./.	./.	0/0:2,0:2:6.01:0,6,97	0/0:2,0:2:3.01:0,3,73	1/1:1,1:2:6.02:99,6,0	./.	./.
chr10	95220732	.	TA	T	1148.66	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=8.383;DP=501;FS=0.000;HRun=7;HaplotypeScore=46.3054;InbreedingCoeff=0.8135;MQ=68.98;MQ0=0;MQRankSum=-0.776;QD=22.97;ReadPosRankSum=-3.155;VQSLOD=2.0065;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:33.10:0,33,409	0/0:7,0:7:18.06:0,18,223	0/0:9,0:8:10.30:0,10,137	0/1:7,0:7:3.01:3,0,78	0/0:27,0:27:78.24:0,78,969	0/0:30,1:31:56.67:0,57,1026	0/0:7,0:7:21.07:0,21,264	1/1:1,35:36:99:1065,105,0	0/0:14,0:14:42.12:0,42,510	0/0:21,0:21:60.16:0,60,738	0/0:16,0:16:42.13:0,42,528	0/0:10,0:10:27.07:0,27,327	0/0:12,0:12:36.12:0,36,453	0/0:17,0:17:42.12:0,42,514	0/0:12,0:12:36.12:0,36,453	0/0:25,0:25:72.22:0,72,893	0/0:29,0:29:84.26:0,84,1044	0/0:19,0:19:48.12:0,48,575	0/0:27,0:27:66.21:0,66,826	0/0:23,0:23:60.18:0,60,742	0/0:10,0:10:27.06:0,27,315	0/0:11,0:11:33.11:0,33,413	0/0:22,0:22:63.20:0,63,791	0/0:5,0:5:15.04:0,15,177	0/0:27,0:27:75.24:0,75,944	0/0:31,0:30:81.26:0,81,1019	0/0:27,0:27:78.25:0,78,981	1/1:0,7:7:21.01:203,21,0
chr10	95221026	.	CGT	C	5269.57	PASS	AB=0.847;AC=42;AF=0.778;AN=54;BaseQRankSum=7.458;DP=629;FS=4.287;HRun=0;HaplotypeScore=94.4829;InbreedingCoeff=0.5082;MQ=57.18;MQ0=19;MQRankSum=3.503;QD=10.73;ReadPosRankSum=2.336;VQSLOD=4.1401;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,12:22:24.07:270,24,0	1/1:1,6:10:26.57:245,27,0	./.	0/0:35,0:9:9.03:0,9,131	1/1:8,11:24:32.42:292,32,0	0/0:18,0:21:39.09:0,39,514	0/1:16,1:18:32.73:33,0,362	0/0:44,0:43:42.04:0,42,502	1/1:9,10:21:35.77:363,36,0	1/1:13,3:18:14.71:129,15,0	1/1:7,8:15:21.06:237,21,0	1/1:7,8:17:23.90:250,24,0	1/1:9,11:22:35.60:346,36,0	1/1:11,6:19:23.70:216,24,0	0/1:11,7:18:25.06:142,0,25	1/1:6,13:23:41.37:394,41,0	0/1:29,2:31:65.03:65,0,323	0/1:20,3:23:79.39:79,0,330	1/1:11,0:17:10.64:55,11,0	1/1:12,0:27:31.25:154,31,0	1/1:18,7:31:38.10:320,38,0	1/1:11,4:16:8.86:82,9,0	1/1:10,8:18:18.05:203,18,0	1/1:6,13:21:32.76:332,33,0	1/1:8,11:23:41.45:394,41,0	1/1:12,14:27:44.93:474,45,0	1/1:7,0:24:39.63:195,40,0	0/0:1,0:7:5.98:0,6,47
chr10	95223589	.	TTGTGTG	T	640.64	PASS	AB=0.974;AC=25;AF=0.595;AN=42;BaseQRankSum=1.522;DP=613;FS=0.000;HRun=0;HaplotypeScore=125.2357;InbreedingCoeff=0.4047;MQ=57.18;MQ0=26;MQRankSum=-1.609;QD=1.84;ReadPosRankSum=1.194;VQSLOD=1.8515;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:22:5.98:59,6,0	0/0:13,0:13:12.04:0,12,283	./.	./.	0/0:22,0:21:2.98:0,3,22	1/1:25,0:26:3.01:34,3,0	0/1:25,0:22:32.15:42,0,32	./.	0/0:25,0:24:8.99:0,9,95	1/1:28,0:27:3.01:42,3,0	./.	1/1:21,3:24:7.23:83,7,0	1/1:21,0:21:6.49:83,6,0	1/1:16,0:14:4.56:45,5,0	0/0:22,0:22:18.03:0,18,450	0/0:27,0:25:20.99:0,21,457	1/1:18,0:17:11.99:132,12,0	0/1:24,0:24:29.82:30,0,135	./.	0/1:23,0:26:0:0,0,0	0/1:33,0:30:0:0,0,0	1/1:24,0:24:14.97:126,15,0	0/1:18,0:17:0:0,0,0	./.	0/0:14,0:13:2.19:0,2,93	./.	1/1:26,0:25:3.01:42,3,0	1/1:10,3:10:3.01:59,3,0
chr10	95224483	.	T	TA	1628.71	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.262;DP=740;FS=6.301;HRun=1;HaplotypeScore=65.9600;InbreedingCoeff=0.9979;MQ=96.12;MQ0=0;MQRankSum=-1.006;QD=42.86;ReadPosRankSum=-3.374;VQSLOD=2.4714;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,1761	0/0:17,0:17:51.16:0,51,698	0/0:34,0:34:99:0,99,1330	0/0:35,0:35:99:0,102,1368	0/0:20,0:20:60.19:0,60,823	0/0:20,0:20:60.20:0,60,839	0/0:19,0:19:57.15:0,57,747	1/1:1,30:31:90.29:1414,90,0	0/0:19,0:19:57.18:0,57,780	0/0:31,0:31:93.30:0,93,1273	0/0:17,0:17:51.17:0,51,712	0/0:36,0:36:99:0,102,1425	0/0:26,0:26:75.24:0,75,1028	0/0:26,0:26:75.24:0,75,1029	0/0:36,0:36:99:0,108,1490	0/0:26,0:26:78.26:0,78,1091	0/0:28,0:28:84.28:0,84,1171	0/0:19,0:19:51.09:0,51,670	0/0:21,0:21:63.18:0,63,846	0/0:32,0:32:93.30:0,93,1285	0/0:46,0:46:99:0,135,1868	0/0:21,0:21:63.18:0,63,846	0/0:24,0:24:68.93:0,69,898	0/0:25,0:25:72.24:0,72,1004	0/0:21,0:21:60.20:0,60,838	0/0:21,0:21:63.21:0,63,881	0/0:39,0:39:99:0,117,1615	1/1:0,7:7:21.07:335,21,0
chr10	95225325	.	CT	C	105.66	PASS	AB=0.944;AC=3;AF=0.054;AN=56;BaseQRankSum=3.508;DP=488;FS=8.252;HRun=12;HaplotypeScore=62.4925;InbreedingCoeff=0.5790;MQ=67.46;MQ0=3;MQRankSum=-0.072;QD=3.20;ReadPosRankSum=1.417;VQSLOD=-0.6028;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,11:16:10.01:189,10,0	0/0:7,0:7:21.04:0,21,213	0/0:20,1:15:12.45:0,12,157	0/1:16,1:9:5.43:5,0,91	0/0:32,0:32:75.61:0,76,732	0/0:28,0:28:72.14:0,72,731	0/0:16,0:16:36.03:0,36,350	0/0:31,0:31:69.11:0,69,683	0/0:19,0:19:54.08:0,54,529	0/0:29,1:30:48.90:0,49,672	0/0:27,0:27:67:0,67,666	0/0:14,0:14:27.05:0,27,274	0/0:13,0:13:30.06:0,30,304	0/0:12,0:12:33.06:0,33,329	0/0:20,1:23:39.56:0,40,553	0/0:7,0:7:18.04:0,18,183	0/0:16,1:21:24.19:0,24,374	0/0:10,0:9:26.97:0,27,247	0/0:29,1:31:29.70:0,30,609	0/0:12,0:12:25.54:0,26,261	0/0:5,0:5:15.03:0,15,152	0/0:6,0:6:15.03:0,15,152	0/0:18,0:18:42.07:0,42,419	0/0:8,0:8:12.02:0,12,122	0/0:18,0:18:51.09:0,51,512	0/0:13,1:14:9.82:0,10,277	0/0:25,0:25:46.20:0,46,565	0/0:7,0:7:15:0,15,142
chr10	95225996	.	G	GT	1126.76	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-7.685;DP=630;FS=0.582;HRun=7;HaplotypeScore=74.2324;InbreedingCoeff=0.8423;MQ=78.63;MQ0=0;MQRankSum=0.358;QD=20.49;ReadPosRankSum=-6.546;VQSLOD=1.4301;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:69.10:0,69,666	0/0:8,0:8:21.03:0,21,203	0/0:17,0:17:34.29:0,34,321	0/0:12,0:12:27.01:0,27,251	0/0:34,0:34:96.15:0,96,927	0/0:31,0:31:57.02:0,57,356	0/0:15,0:15:29.18:0,29,132	1/1:6,31:37:93.25:1099,93,0	0/0:21,0:22:62.10:0,62,572	0/0:38,0:38:99:0,114,1100	0/0:17,0:17:45.07:0,45,435	0/0:21,0:21:19.45:0,19,156	0/0:25,0:25:36.22:0,36,267	0/0:28,0:28:44.16:0,44,280	0/0:21,0:21:60.10:0,60,579	0/0:24,0:24:72.12:0,72,695	0/0:22,0:22:60.07:0,60,571	0/0:12,0:12:27.04:0,27,261	0/0:18,0:18:44.94:0,45,413	0/0:22,0:22:63.10:0,63,608	0/0:22,0:22:60.09:0,60,579	0/1:10,0:10:1:1,0,92	0/0:25,0:25:44.19:0,44,278	0/0:23,0:23:37.38:0,37,237	0/0:17,0:17:45.06:0,45,430	0/0:41,0:41:99:0,114,1088	0/0:31,0:31:93.15:0,93,898	1/1:4,4:8:11.11:143,11,0
chr10	95226614	.	TGGG	T	11447.86	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-1.744;DP=449;FS=1.858;HRun=11;HaplotypeScore=76.5055;InbreedingCoeff=0.9077;MQ=72.95;MQ0=2;MQRankSum=-1.773;QD=30.69;ReadPosRankSum=5.576;VQSLOD=4.1567;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:27.04:0,27,429	1/1:2,8:10:21.05:276,21,0	0/0:25,0:18:31.32:0,31,425	0/0:7,0:3:8.92:0,9,90	1/1:2,30:32:81.21:1033,81,0	1/1:1,22:23:57.18:749,57,0	1/1:4,10:14:21.05:275,21,0	1/1:2,21:23:63.20:827,63,0	1/1:1,11:12:30.09:394,30,0	1/1:2,10:12:30.09:394,30,0	1/1:3,20:23:51.27:672,51,0	1/1:2,14:16:33.10:434,33,0	1/1:1,13:14:36.11:473,36,0	1/1:2,15:17:42.13:552,42,0	1/1:2,13:15:33.09:434,33,0	1/1:2,7:9:21.06:276,21,0	0/0:19,0:20:50.09:0,50,956	0/0:11,0:12:34.35:0,34,610	1/1:8,12:20:42.09:535,42,0	1/1:3,27:30:81.25:1049,81,0	1/1:2,3:5:6.01:79,6,0	1/1:0,10:10:27.09:355,27,0	1/1:1,25:26:63.20:824,63,0	1/1:1,4:5:9.01:118,9,0	1/1:1,14:15:33.11:431,33,0	1/1:3,16:19:48.11:605,48,0	1/1:3,18:21:48.15:623,48,0	1/1:0,1:1:3.01:39,3,0
chr10	95226623	.	GGGT	G	4637.46	PASS	AB=0.984;AC=38;AF=0.679;AN=56;BaseQRankSum=7.570;DP=450;FS=2.607;HRun=0;HaplotypeScore=100.9624;InbreedingCoeff=0.3485;MQ=74.47;MQ0=1;MQRankSum=-1.457;QD=12.43;ReadPosRankSum=10.133;VQSLOD=3.1716;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:35.84:0,36,454	1/1:8,0:8:20.25:116,20,0	0/0:23,0:18:29.35:0,29,426	0/0:10,0:6:17.75:0,18,157	0/1:39,1:40:46.77:420,0,47	1/1:23,0:23:32.63:271,33,0	1/1:10,0:10:20.46:146,20,0	1/1:21,0:21:59.25:326,59,0	1/1:11,0:11:29.19:181,29,0	0/1:13,0:13:47.68:147,0,48	0/1:25,0:24:16.19:234,0,16	0/1:16,0:16:10.05:147,0,10	1/1:15,0:15:24.73:216,25,0	1/1:16,0:16:18.64:218,19,0	1/1:13,0:13:32.15:207,32,0	0/1:9,0:9:4.48:105,0,4	0/0:18,0:18:50.08:0,50,909	0/0:13,0:13:35.71:0,36,672	0/1:16,2:18:29.55:209,0,30	1/1:31,1:32:34.89:464,35,0	1/1:3,0:3:5.72:30,6,0	1/1:11,0:11:4.11:125,4,0	1/1:27,0:27:28.03:329,28,0	0/1:5,0:5:6.51:32,0,7	1/1:15,1:16:10.61:228,11,0	1/1:19,0:19:14.58:195,15,0	1/1:19,1:20:24.89:284,25,0	0/1:2,0:2:9.58:10,0,18
chr10	95227135	.	TGA	T	1354.66	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.149;DP=590;FS=2.895;HRun=0;HaplotypeScore=69.7188;InbreedingCoeff=0.9873;MQ=93.77;MQ0=0;MQRankSum=-0.467;QD=32.25;ReadPosRankSum=-3.658;VQSLOD=4.4471;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,1966	0/0:6,0:6:15.05:0,15,253	0/0:28,0:27:59.35:0,59,952	0/0:34,0:34:89.88:0,90,1356	0/0:25,0:25:66.20:0,66,1078	0/0:19,0:19:48.16:0,48,822	0/0:17,0:17:48.16:0,48,818	1/1:3,33:36:99:1238,99,0	0/0:16,0:16:45.13:0,45,718	0/0:21,0:22:59.67:0,60,912	0/0:24,0:24:66.20:0,66,1097	0/0:15,0:15:39.11:0,39,616	0/0:21,0:21:60.18:0,60,972	0/0:12,0:12:33.09:0,33,508	0/0:23,0:23:60.21:0,60,1022	0/0:25,0:25:69.21:0,69,1130	0/0:22,0:22:66.21:0,66,1104	0/0:17,0:17:45.08:0,45,685	0/0:22,0:22:63.19:0,63,1003	0/0:26,0:26:69.24:0,69,1182	0/0:28,0:28:75.26:0,75,1285	0/0:21,0:21:57.17:0,57,925	0/0:13,0:13:30.10:0,30,513	0/0:18,0:18:51.17:0,51,873	0/0:17,0:17:45.15:0,45,767	0/0:19,0:19:51.17:0,51,852	0/0:15,0:15:45.15:0,45,765	1/1:0,6:6:18.06:236,18,0
chr10	95227639	.	AAG	A	3918.49	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.186;DP=570;FS=0.858;HRun=0;HaplotypeScore=118.5645;InbreedingCoeff=0.9771;MQ=77.74;MQ0=0;MQRankSum=-14.114;QD=41.25;ReadPosRankSum=4.937;VQSLOD=5.4444;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.32:0,93,1872	0/0:17,0:17:51.16:0,51,983	0/0:12,0:12:32.85:0,33,602	0/0:20,0:19:54.18:0,54,1024	0/0:25,0:25:75.26:0,75,1524	0/0:25,0:25:75.26:0,75,1524	0/0:19,0:19:57.20:0,57,1158	0/0:32,0:32:96.31:0,96,1834	0/0:29,0:29:84.29:0,84,1704	1/1:0,15:15:45.15:670,45,0	1/1:2,10:12:36.11:486,36,0	0/0:21,0:21:63.22:0,63,1245	0/0:25,0:25:75.26:0,75,1507	0/0:25,0:25:72.25:0,72,1443	0/0:31,0:31:93.32:0,93,1872	0/0:22,0:22:66.23:0,66,1324	0/0:35,0:35:99:0,105,2130	0/0:9,0:9:27.09:0,27,549	1/1:3,4:7:18.04:231,18,0	1/1:1,19:20:60.18:843,60,0	1/1:1,3:4:9.03:128,9,0	0/0:29,0:29:84.29:0,84,1673	0/0:25,0:25:75.24:0,75,1454	0/0:15,0:15:45.15:0,45,914	0/0:24,0:24:72.24:0,72,1410	1/1:1,13:14:42.12:602,42,0	1/1:2,21:23:69.19:959,69,0	0/0:3,0:3:9.03:0,9,183
chr10	95227648	.	T	TA	3480.06	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.074;DP=542;FS=3.734;HRun=0;HaplotypeScore=107.7447;InbreedingCoeff=0.9775;MQ=76.60;MQ0=0;MQRankSum=-14.332;QD=37.02;ReadPosRankSum=3.965;VQSLOD=3.4903;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.27:0,84,1157	0/0:15,0:15:45.14:0,45,612	0/0:12,0:12:33.11:0,33,449	0/0:20,0:19:51.15:0,51,680	0/0:26,0:26:78.23:0,78,1053	0/0:23,0:23:66.22:0,66,923	0/0:19,0:19:57.19:0,57,796	0/0:25,0:25:75.25:0,75,1047	0/0:28,0:28:84.27:0,84,1157	1/1:1,15:16:48.05:621,48,0	1/1:0,11:11:33.10:419,33,0	0/0:19,0:19:57.19:0,57,797	0/0:24,0:24:72.24:0,72,1006	0/0:24,0:24:66.21:0,66,906	0/0:27,0:27:81.26:0,81,1116	0/0:22,0:22:66.22:0,66,923	0/0:34,0:34:99:0,99,1363	0/0:9,0:9:27.09:0,27,377	1/1:1,7:8:19.58:217,20,0	1/1:0,19:19:57.18:734,57,0	1/1:1,3:4:9.03:118,9,0	0/0:29,0:29:81.25:0,81,1100	0/0:21,0:21:63.21:0,63,881	0/0:18,0:18:54.18:0,54,754	0/0:21,0:21:63.15:0,63,841	1/1:0,14:14:40.68:528,41,0	1/1:0,22:22:66.21:843,66,0	0/0:3,0:3:9.03:0,9,126
chr10	95228667	.	AT	A	462.48	PASS	AB=0.859;AC=7;AF=0.125;AN=56;BaseQRankSum=4.906;DP=501;FS=2.889;HRun=13;HaplotypeScore=60.5101;InbreedingCoeff=0.4721;MQ=70.95;MQ0=1;MQRankSum=1.208;QD=6.25;ReadPosRankSum=-0.598;VQSLOD=2.0487;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:32:59.74:0,60,544	0/1:6,1:7:7.68:8,0,76	0/0:14,0:11:5.35:0,5,36	0/0:5,0:4:2.37:0,2,8	0/0:29,3:32:9.32:0,9,541	0/0:21,0:21:42.06:0,42,404	0/0:11,0:11:17.98:0,18,165	1/1:12,24:37:64.58:464,65,0	0/0:12,1:13:30.01:0,30,277	0/0:26,0:26:53.68:0,54,486	0/0:21,0:21:60:0,60,557	0/0:11,0:11:24.91:0,25,230	0/0:8,1:9:15.02:0,15,142	0/0:14,3:18:10.28:0,10,280	0/0:19,2:21:17.13:0,17,319	0/0:19,1:21:16.94:0,17,296	0/1:12,2:15:4.96:5,0,258	0/0:8,0:8:20.93:0,21,191	0/0:21,0:21:41.99:0,42,381	0/0:30,1:31:50.15:0,50,623	0/0:14,0:14:30.05:0,30,292	0/0:12,2:14:11.12:0,11,257	0/0:18,0:19:37.33:0,37,328	0/1:7,2:9:6.89:7,0,97	0/0:15,0:15:42.07:0,42,408	0/0:22,0:25:30.50:0,31,361	0/0:21,2:25:11.02:0,11,368	1/1:1,5:6:14.90:109,15,0
chr10	95228699	.	A	AT	955.24	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.419;DP=484;FS=14.294;HRun=3;HaplotypeScore=50.7428;InbreedingCoeff=0.9207;MQ=81.52;MQ0=0;MQRankSum=-3.526;QD=29.85;ReadPosRankSum=0.613;VQSLOD=1.8378;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:75.25:1050,75,0	0/0:7,0:7:21.06:0,21,252	0/0:18,1:17:40.79:0,41,436	0/0:10,0:9:18.03:0,18,195	0/0:32,0:32:90.25:0,90,1055	0/0:19,0:19:54.17:0,54,647	0/0:8,0:8:21.06:0,21,252	0/0:31,0:31:84.25:0,84,999	0/0:11,0:11:33.10:0,33,396	0/0:18,0:18:54.17:0,54,648	0/0:23,0:23:60.17:0,60,709	0/0:8,0:8:24.07:0,24,288	0/0:13,0:13:36.11:0,36,432	0/0:17,0:17:51.14:0,51,601	0/0:14,0:14:42.13:0,42,504	0/0:15,0:15:45.14:0,45,540	0/0:16,0:16:42.13:0,42,503	0/0:7,0:7:18.05:0,18,216	0/0:18,0:18:48.15:0,48,576	0/0:27,0:27:78.24:0,78,936	0/0:16,0:16:48.15:0,48,576	0/0:17,0:17:48.15:0,48,576	0/0:13,0:13:33.10:0,33,396	0/0:4,0:4:9.03:0,9,108	0/0:20,0:20:60.18:0,60,719	0/0:27,0:27:78.24:0,78,936	0/0:33,0:33:87.26:0,87,1044	0/0:9,0:9:27.08:0,27,323
chr10	95230559	.	GT	G	680.03	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.197;DP=591;FS=2.259;HRun=8;HaplotypeScore=64.0504;InbreedingCoeff=0.9919;MQ=82.69;MQ0=2;MQRankSum=2.660;QD=19.43;ReadPosRankSum=-2.868;VQSLOD=2.8318;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:81.24:0,81,966	0/0:16,0:16:42.10:0,42,484	0/0:50,0:33:57.48:0,57,591	0/0:32,0:28:17.03:0,17,259	0/0:33,0:33:93.27:0,93,1108	0/0:23,0:23:66.20:0,66,797	0/0:12,0:12:30.08:0,30,351	1/1:4,21:25:61.97:541,62,0	0/0:12,0:12:27.08:0,27,326	0/0:25,0:25:63.19:0,63,760	0/0:20,0:20:60.18:0,60,723	0/0:12,0:12:30.09:0,30,362	0/0:18,0:18:42.13:0,42,506	0/0:16,0:16:39.08:0,39,454	0/0:23,0:23:66.16:0,66,771	0/0:13,0:13:36.11:0,36,435	0/0:24,0:24:66.18:0,66,771	0/0:9,0:9:24.07:0,24,290	0/0:19,0:19:45.08:0,45,516	0/0:27,0:27:66.13:0,66,757	0/0:12,0:12:33.10:0,33,398	0/0:18,0:18:51.10:0,51,590	0/0:22,0:22:54.15:0,54,637	0/0:24,0:24:66.20:0,66,792	0/0:20,0:20:51.11:0,51,599	0/0:18,0:18:48.15:0,48,580	0/0:27,0:27:75.21:0,75,883	1/1:0,9:9:27.04:261,27,0
chr10	95230809	.	GAGAGAC	G	250.87	PASS	AB=1.000;AC=7;AF=0.135;AN=52;BaseQRankSum=8.626;DP=601;FS=2.242;HRun=0;HaplotypeScore=165.5122;InbreedingCoeff=0.3580;MQ=48.49;MQ0=29;MQRankSum=-3.100;QD=2.28;ReadPosRankSum=-4.816;VQSLOD=1.3775;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:6,23:29:3.44:26,3,0	0/0:12,0:12:17.16:0,17,334	./.	./.	0/0:29,0:28:38.59:0,39,784	0/0:29,0:28:61.74:0,62,1221	0/0:12,0:12:21.04:0,21,391	0/1:43,0:42:99:218,0,412	0/0:12,0:12:21.22:0,21,377	0/0:16,0:16:25.68:0,26,783	0/0:18,0:16:16.97:0,17,296	0/0:21,0:20:26.08:0,26,458	0/0:17,0:17:35.61:0,36,620	0/0:15,0:15:8.55:0,9,286	0/0:27,0:27:48.96:0,49,815	0/0:18,0:18:32.42:0,32,481	0/0:14,0:14:30.47:0,30,612	0/1:10,0:10:16.02:16,0,291	0/1:21,0:21:8.70:9,0,400	0/0:22,0:21:12.92:0,13,497	0/0:19,0:17:30.09:0,30,646	0/0:22,0:22:29.81:0,30,540	0/0:17,0:17:27.53:0,28,515	0/0:21,0:21:20.85:0,21,396	0/0:29,0:27:8.09:0,8,296	0/0:22,0:21:0.27:0,0,640	0/0:40,0:39:32.24:0,32,1243	1/1:7,0:6:14.89:108,15,0
chr10	95230815	.	CAGAGACAGAG	C	1104.51	PASS	AB=0.944;AC=10;AF=0.192;AN=52;BaseQRankSum=8.057;DP=573;FS=3.788;HRun=0;HaplotypeScore=189.9960;InbreedingCoeff=0.1971;MQ=48.27;MQ0=28;MQRankSum=-5.380;QD=6.17;ReadPosRankSum=-4.230;VQSLOD=1.0825;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:5.93:67,6,0	0/0:11,0:11:23.43:0,23,385	./.	./.	0/0:27,0:26:42.03:0,42,870	0/1:29,0:28:46.14:46,0,1147	0/0:10,0:10:23.08:0,23,396	0/1:21,21:41:99:739,0,535	0/0:12,0:12:26.41:0,26,412	0/0:15,0:15:42.07:0,42,894	0/0:17,0:15:17.95:0,18,316	0/1:19,0:18:62.24:62,0,376	0/0:18,0:18:0.40:0,0,609	0/1:14,0:14:96.15:96,0,338	0/0:25,0:25:54.41:0,54,901	0/0:19,0:19:35.47:0,35,608	0/0:12,0:12:31.79:0,32,841	0/0:10,0:11:14.09:0,14,609	0/0:20,0:20:40.72:0,41,688	0/0:22,0:21:27.03:0,27,580	0/0:20,0:18:30.03:0,30,641	0/1:21,0:21:13.71:14,0,444	0/0:16,0:16:23.07:0,23,548	0/1:19,0:19:4.88:5,0,385	0/0:26,0:25:24.50:0,24,376	0/0:21,0:20:51.08:0,51,997	0/0:39,0:38:77.54:0,78,1622	1/1:7,0:6:15.03:218,15,0
chr10	95230835	.	CAGAGAG	C	2324.49	PASS	AB=0.798;AC=34;AF=0.680;AN=50;BaseQRankSum=0.660;DP=515;FS=3.343;HRun=0;HaplotypeScore=157.2273;InbreedingCoeff=0.1794;MQ=49.69;MQ0=21;MQRankSum=-1.456;QD=5.91;ReadPosRankSum=3.755;VQSLOD=2.4547;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:27:0.25:0,0,12	1/1:5,0:12:9.03:122,9,0	./.	./.	1/1:16,0:23:3.01:45,3,0	0/1:22,0:26:5.05:108,0,5	0/0:7,0:12:4.94:0,5,22	0/0:48,0:46:7.19:0,7,31	1/1:6,0:16:12.04:165,12,0	0/1:10,6:16:57.89:218,0,58	0/1:6,9:14:14.02:14,0,15	1/1:9,0:18:10.74:130,11,0	1/1:8,0:15:3.01:42,3,0	1/1:5,0:17:9.03:125,9,0	1/1:13,0:21:19.85:251,20,0	1/1:6,0:14:6.02:81,6,0	0/0:12,0:15:30.40:0,30,313	0/0:11,0:13:21.38:0,21,204	1/1:9,5:13:10.03:193,10,0	0/1:9,10:18:21.08:62,0,21	./.	0/1:16,0:24:28.38:45,0,28	0/1:14,0:15:16.13:16,0,24	1/1:7,0:17:3:26,3,0	1/1:8,0:18:8.71:118,9,0	1/1:10,9:18:5.39:373,5,0	1/1:23,13:35:20.65:338,21,0	0/1:5,0:5:9.58:10,0,10
chr10	95230847	.	G	GAC	459.39	PASS	AB=0.994;AC=6;AF=0.107;AN=56;BaseQRankSum=-0.212;DP=481;FS=2.975;HRun=0;HaplotypeScore=122.4433;InbreedingCoeff=0.1358;MQ=48.99;MQ0=17;MQRankSum=-1.709;QD=4.74;ReadPosRankSum=-0.825;VQSLOD=3.0988;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:28.71:0,29,213	0/0:12,0:12:20.71:0,21,141	0/0:12,0:3:5.88:0,6,36	0/0:12,0:2:3.01:0,3,31	0/0:21,0:20:25.89:0,26,205	0/0:20,0:17:5.70:0,6,147	0/0:12,1:13:14.83:0,15,107	0/1:42,1:41:99:369,0,195	0/0:14,0:13:17.73:0,18,124	0/0:15,0:15:44.74:0,45,360	0/0:13,0:12:8.92:0,9,67	0/0:20,0:19:6.48:0,6,160	0/0:13,0:12:14.91:0,15,117	0/0:15,0:15:14.47:0,14,87	0/1:19,0:19:11.13:11,0,222	0/0:15,0:15:14.62:0,15,110	0/0:17,0:17:43.02:0,43,340	0/0:16,0:15:27.45:0,27,281	0/0:15,0:14:35.78:0,36,286	0/0:14,0:13:20.43:0,20,133	0/0:16,0:13:20.95:0,21,170	0/1:18,0:18:30.03:30,0,116	0/1:12,0:11:76.52:77,0,102	0/0:16,0:16:14.90:0,15,113	0/0:13,0:14:8.88:0,9,58	0/0:20,0:19:45.31:0,45,375	0/0:31,0:30:56.68:0,57,446	1/1:3,2:5:8.90:95,9,0
chr10	95232789	.	ATTTATG	A	9623.12	PASS	AB=0.794;AC=49;AF=0.907;AN=54;BaseQRankSum=4.049;DP=248;FS=43.404;HRun=0;HaplotypeScore=183.6704;InbreedingCoeff=0.1622;MQ=35.20;MQ0=6;MQRankSum=-1.404;QD=41.48;ReadPosRankSum=3.514;VQSLOD=2.5438;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,4:5:12.04:294,12,0	1/1:1,1:2:3.01:74,3,0	0/0:15,0:2:5.85:0,6,73	0/1:14,0:3:7.69:8,0,34	1/1:10,9:19:24.08:566,24,0	1/1:1,7:8:21.07:515,21,0	1/1:1,3:3:6.02:147,6,0	0/1:3,2:4:94.06:138,0,94	1/1:5,3:8:9.03:221,9,0	1/1:3,5:8:15.05:368,15,0	1/1:4,8:12:21.07:493,21,0	1/1:1,2:3:6.02:147,6,0	1/1:4,7:11:21.07:504,21,0	1/1:4,10:14:30.10:735,30,0	1/1:4,6:9:18.06:428,18,0	1/1:2,9:10:27.09:662,27,0	1/1:1,3:3:9.03:220,9,0	1/1:2,2:2:6.02:124,6,0	0/1:3,3:6:99:206,0,132	1/1:5,10:15:30.10:697,30,0	1/1:0,1:1:3.01:74,3,0	1/1:4,7:11:18.06:441,18,0	1/1:6,5:11:15.05:367,15,0	1/1:1,2:2:2.96:64,3,0	1/1:3,8:11:24.08:588,24,0	1/1:2,8:10:24.08:589,24,0	1/1:8,13:20:39.13:955,39,0	./.
chr10	95232805	.	T	TA	2529.19	PASS	AB=0.500;AC=49;AF=0.907;AN=54;BaseQRankSum=2.850;DP=229;FS=0.000;HRun=0;HaplotypeScore=184.0510;InbreedingCoeff=0.4893;MQ=35.92;MQ0=29;MQRankSum=-1.022;QD=13.53;ReadPosRankSum=2.665;VQSLOD=4.6302;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,4:4:11.78:73,12,0	1/1:0,1:1:2.97:20,3,0	0/0:17,0:2:3.90:0,4,44	0/0:24,0:1:3.01:0,3,42	1/1:2,9:11:17.36:100,17,0	1/1:0,7:7:20.69:133,21,0	1/1:0,3:2:5.91:38,6,0	1/1:7,2:9:22.99:176,23,0	1/1:1,3:3:8.87:57,9,0	1/1:6,5:11:26.81:196,27,0	1/1:6,8:12:14.64:86,15,0	1/1:0,2:2:5.91:38,6,0	1/1:2,7:7:17.40:102,17,0	1/1:1,10:10:29.34:180,29,0	1/1:1,6:6:14.78:95,15,0	1/1:0,9:9:26.60:171,27,0	1/1:1,3:3:8.87:57,9,0	1/1:0,3:3:5.96:43,6,0	1/1:1,3:4:8.97:71,9,0	1/1:5,10:15:20.65:130,21,0	1/1:1,1:1:2.96:19,3,0	1/1:5,7:12:17.69:111,18,0	1/1:1,5:6:14.74:92,15,0	0/1:0,2:2:0.22:0,0,0	1/1:0,8:8:23.67:154,24,0	1/1:5,8:13:36.16:258,36,0	1/1:1,13:13:38.26:237,38,0	./.
chr10	95232806	.	GTCT	G	3233.06	PASS	AB=0.500;AC=49;AF=0.907;AN=54;BaseQRankSum=3.392;DP=234;FS=0.000;HRun=0;HaplotypeScore=179.9643;InbreedingCoeff=0.4868;MQ=35.58;MQ0=32;MQRankSum=-0.138;QD=17.02;ReadPosRankSum=3.155;VQSLOD=3.2874;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,4:4:12:105,12,0	1/1:0,1:1:3:28,3,0	0/0:16,0:2:5.95:0,6,69	0/0:25,0:1:3.01:0,3,74	1/1:0,9:11:19.69:153,20,0	1/1:0,7:7:21.01:189,21,0	1/1:0,3:2:6:54,6,0	1/1:0,2:9:6.02:65,6,0	1/1:1,3:3:9:81,9,0	1/1:0,5:11:15.03:152,15,0	1/1:2,8:12:16.34:129,16,0	1/1:0,2:2:6:54,6,0	1/1:2,7:7:18.83:151,19,0	1/1:1,10:10:29.98:260,30,0	1/1:1,6:6:15.48:136,15,0	1/1:1,9:10:27.01:243,27,0	1/1:1,3:3:9:81,9,0	1/1:1,3:3:6.01:59,6,0	1/1:1,3:4:9.02:95,9,0	1/1:0,10:15:22.83:190,23,0	1/1:1,1:1:3:27,3,0	1/1:0,7:12:18:159,18,0	1/1:1,5:6:15:132,15,0	0/1:0,2:2:0.32:1,0,0	1/1:0,8:8:24.02:218,24,0	1/1:0,8:13:24.04:240,24,0	1/1:1,13:13:38.99:341,39,0	./.
chr10	95233352	.	TATATACATATAC	T	2638.67	PASS	AB=0.697;AC=26;AF=0.813;AN=32;BaseQRankSum=-0.491;DP=525;FS=8.314;HRun=0;HaplotypeScore=180.5882;InbreedingCoeff=0.4841;MQ=65.91;MQ0=3;MQRankSum=-1.513;QD=7.97;ReadPosRankSum=0.859;VQSLOD=2.1792;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:6.02:84,6,0	1/1:5,0:13:3.01:84,3,0	./.	./.	1/1:13,0:22:9.03:197,9,0	./.	./.	./.	./.	1/1:26,10:36:21.05:625,21,0	1/1:18,13:31:9.87:224,10,0	./.	./.	./.	1/1:19,0:19:2.04:6,2,0	1/1:11,0:18:3.01:83,3,0	0/0:14,0:14:9.03:0,9,120	0/1:5,0:8:0:0,0,0	1/1:13,4:17:12.04:395,12,0	1/1:28,7:35:8.99:163,9,0	./.	./.	0/1:15,0:30:0.03:0,0,0	./.	1/1:11,0:20:3.01:84,3,0	1/1:20,6:26:18.06:597,18,0	1/1:21,11:32:5.70:201,6,0	0/0:12,0:11:6.02:0,6,215
chr10	95233462	.	C	CAT	1632.67	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.668;DP=552;FS=3.094;HRun=0;HaplotypeScore=94.9538;InbreedingCoeff=0.8171;MQ=65.10;MQ0=0;MQRankSum=-1.271;QD=29.15;ReadPosRankSum=-5.196;VQSLOD=3.5768;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.24:0,75,945	0/0:14,0:14:30.10:0,30,378	0/0:7,0:5:3.01:0,3,35	0/0:5,0:5:1.88:0,2,13	0/0:27,0:27:69.22:0,69,869	0/0:23,0:23:57.17:0,57,705	0/0:15,0:15:33.09:0,33,402	1/1:9,25:34:40.44:1155,40,0	0/0:16,0:16:45.14:0,45,567	0/0:29,0:29:72.20:0,72,866	0/0:32,0:32:87.28:0,87,1096	0/0:16,0:16:45.13:0,45,553	0/0:23,0:23:57.18:0,57,718	0/0:15,0:15:36.11:0,36,453	0/0:25,0:25:60.14:0,60,714	0/0:22,0:22:60.19:0,60,756	0/0:21,0:21:60.15:0,60,726	0/0:19,0:19:36.11:0,36,453	0/0:6,0:6:15.05:0,15,189	0/0:30,0:30:87.27:0,87,1084	0/0:11,0:11:24.08:0,24,303	0/0:7,0:7:12.04:0,12,151	0/0:19,0:19:45.04:0,45,567	0/0:10,0:10:27.07:0,27,326	0/0:20,0:20:54.16:0,54,667	0/0:21,0:21:57.14:0,57,701	0/0:35,0:35:93.30:0,93,1171	1/1:0,20:22:36.12:598,36,0
chr10	95237342	.	G	GA	200.98	PASS	AB=0.851;AC=9;AF=0.173;AN=52;BaseQRankSum=4.891;DP=269;FS=28.164;HRun=0;HaplotypeScore=29.0968;InbreedingCoeff=-0.0854;MQ=41.51;MQ0=53;MQRankSum=-4.539;QD=2.72;ReadPosRankSum=4.456;VQSLOD=1.2097;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,1:14:18.06:0,18,251	1/1:0,1:1:3.01:46,3,0	./.	./.	0/1:4,2:4:35.57:39,0,36	0/0:6,0:4:9.01:0,9,93	0/0:8,0:6:6.02:0,6,83	0/0:13,0:4:6.02:0,6,82	0/0:10,1:9:21.05:0,21,262	0/0:6,1:5:15.04:0,15,195	0/0:10,0:9:18.06:0,18,250	0/1:11,1:9:36.53:37,0,59	0/0:10,0:9:17.83:0,18,233	0/0:15,1:14:27.07:0,27,345	0/0:6,0:4:2.99:0,3,42	0/0:7,0:6:18:0,18,199	0/1:9,4:12:99:116,0,128	0/0:10,0:7:15.05:0,15,210	0/0:5,0:1:3.01:0,3,42	0/0:10,1:10:21.07:0,21,291	0/1:13,1:12:12.36:12,0,349	0/0:7,0:7:9.03:0,9,125	0/0:7,0:6:12.04:0,12,167	0/1:12,2:13:18.40:18,0,270	0/1:3,1:2:35.89:40,0,36	0/1:9,1:8:24.71:25,0,222	0/0:8,0:8:18.05:0,18,235	0/0:3,0:3:6.02:0,6,84
chr10	95237489	.	G	GA	635.21	PASS	AB=0.693;AC=3;AF=0.054;AN=56;BaseQRankSum=-7.669;DP=352;FS=0.000;HRun=9;HaplotypeScore=35.1132;InbreedingCoeff=0.1642;MQ=60.09;MQ0=8;MQRankSum=-1.355;QD=12.46;ReadPosRankSum=-4.191;VQSLOD=1.1344;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:95.96:0,96,829	0/0:6,0:7:20.03:0,20,162	0/0:12,0:7:17.49:0,17,138	0/0:6,0:5:12.10:0,12,85	0/0:13,0:13:38.99:0,39,339	0/0:15,0:15:29.97:0,30,260	0/0:11,0:11:32.99:0,33,287	0/1:12,20:31:6.16:576,0,6	0/0:9,0:9:26.99:0,27,234	0/0:10,0:10:29.99:0,30,260	0/0:14,0:14:26.98:0,27,234	0/0:12,0:12:26.97:0,27,231	0/0:9,0:9:20.89:0,21,182	0/0:10,0:10:26.99:0,27,234	0/0:6,0:6:18:0,18,156	0/0:5,0:5:15:0,15,130	0/0:11,0:11:29.98:0,30,257	0/0:16,0:15:44.99:0,45,391	0/0:7,0:9:18.61:0,19,160	0/0:18,0:18:47.95:0,48,411	0/0:12,0:12:29.99:0,30,260	0/0:4,0:4:9:0,9,78	0/0:9,0:9:17.86:0,18,156	0/1:11,1:12:0.19:0,0,227	0/0:10,0:10:29.99:0,30,260	0/0:17,0:17:47.97:0,48,413	0/0:20,1:21:23.79:0,24,432	0/1:1,5:6:8.01:148,0,8
chr10	95238090	.	TAC	T	3181.15	PASS	AB=0.870;AC=20;AF=0.357;AN=56;BaseQRankSum=9.871;DP=601;FS=1.895;HRun=0;HaplotypeScore=77.3023;InbreedingCoeff=0.6732;MQ=63.56;MQ0=8;MQRankSum=1.495;QD=12.83;ReadPosRankSum=2.363;VQSLOD=3.1852;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,1:36:37.15:0,37,959	0/0:9,0:9:18.53:0,19,278	0/1:41,1:22:7.50:7,0,271	0/0:33,0:17:17.96:0,18,183	0/1:23,2:25:12.80:13,0,711	1/1:3,11:15:26.91:294,27,0	1/1:1,8:9:18.05:210,18,0	0/0:27,0:27:38.93:0,39,366	0/0:15,0:15:36.12:0,36,547	0/0:26,0:27:57.18:0,57,868	0/0:22,1:23:14.93:0,15,713	1/1:2,16:18:42.60:491,43,0	1/1:8,21:31:47.81:517,48,0	1/1:3,14:19:32.72:342,33,0	0/0:22,0:22:54.14:0,54,843	0/0:21,0:20:48.57:0,49,680	0/0:19,0:19:42.14:0,42,653	0/0:12,0:12:19.69:0,20,203	0/1:5,3:8:72.40:72,0,79	0/0:26,3:29:6.78:0,7,572	0/0:21,1:21:16.18:0,16,691	1/1:1,14:16:29.92:329,30,0	1/1:5,24:30:59.96:677,60,0	1/1:3,13:17:32.93:364,33,0	0/0:25,0:25:22.83:0,23,802	0/1:14,3:17:70.70:71,0,343	0/0:19,0:18:48.16:0,48,740	0/0:14,0:13:8.43:0,8,77
chr10	95239680	.	GA	G	1143.70	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.235;DP=456;FS=2.285;HRun=3;HaplotypeScore=42.6206;InbreedingCoeff=0.9238;MQ=65.95;MQ0=0;MQRankSum=0.423;QD=27.90;ReadPosRankSum=-2.924;VQSLOD=2.0529;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.25:0,87,1197	0/0:9,0:9:27.09:0,27,388	0/0:14,0:13:39.13:0,39,550	0/0:7,0:4:6.02:0,6,86	0/0:22,0:22:66.22:0,66,949	0/0:15,0:15:45.15:0,45,647	0/0:14,0:14:39.13:0,39,562	1/1:1,28:29:81.25:1004,81,0	0/0:17,0:17:51.15:0,51,714	0/0:21,0:21:63.10:0,63,860	0/0:18,0:18:54.18:0,54,777	0/0:6,0:6:18.06:0,18,259	0/0:13,0:13:36.12:0,36,517	0/0:16,0:16:48.15:0,48,672	0/0:10,0:10:30.10:0,30,432	0/0:15,0:15:45.15:0,45,648	0/0:18,0:18:54.18:0,54,778	0/0:12,0:12:33.11:0,33,468	0/0:20,0:20:54.18:0,54,775	0/0:24,0:24:69.22:0,69,975	0/0:4,0:4:12.04:0,12,172	0/0:6,0:6:18.06:0,18,259	0/0:16,0:16:45.15:0,45,645	0/0:13,0:13:39.12:0,39,544	0/0:20,0:20:54.18:0,54,778	0/0:23,0:23:66.21:0,66,934	0/0:32,0:32:96.32:0,96,1383	1/1:0,12:12:21.07:260,21,0
chr10	95240906	.	AAAG	A	1346.91	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.565;DP=536;FS=1.425;HRun=0;HaplotypeScore=76.7376;InbreedingCoeff=0.9902;MQ=79.73;MQ0=0;MQRankSum=-3.535;QD=35.45;ReadPosRankSum=-1.495;VQSLOD=3.7202;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,2017	0/0:10,0:10:30.10:0,30,650	0/0:21,0:21:46.35:0,46,744	0/0:11,0:10:23.99:0,24,337	0/0:19,0:19:51.17:0,51,1066	0/0:13,0:13:36.12:0,36,746	0/0:17,0:17:51.17:0,51,1087	1/1:3,29:32:84.23:1230,84,0	0/0:24,0:24:72.22:0,72,1456	0/0:17,0:17:51.17:0,51,1088	0/0:12,0:12:36.12:0,36,777	0/0:18,0:18:48.14:0,48,931	0/0:26,0:26:72.21:0,72,1479	0/0:23,0:23:60.18:0,60,1222	0/0:22,0:22:63.22:0,63,1347	0/0:20,0:20:57.20:0,57,1218	0/0:30,0:30:81.25:0,81,1714	0/0:15,0:15:39.13:0,39,846	0/0:20,0:20:54.19:0,54,1133	0/0:17,0:17:45.15:0,45,976	0/0:13,0:13:39.13:0,39,811	0/0:18,0:18:51.18:0,51,1096	0/0:15,0:15:39.13:0,39,817	0/0:25,0:25:75.26:0,75,1590	0/0:17,0:17:51.17:0,51,1067	0/0:18,0:18:54.18:0,54,1096	0/0:21,0:21:57.16:0,57,1129	1/1:0,6:6:15.05:235,15,0
chr10	95241307	.	AT	A	1007.10	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.003;DP=505;FS=0.721;HRun=2;HaplotypeScore=55.7861;InbreedingCoeff=0.9921;MQ=84.48;MQ0=1;MQRankSum=-7.710;QD=34.73;ReadPosRankSum=0.927;VQSLOD=3.7791;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.30:0,96,1398	0/0:11,0:11:33.11:0,33,494	0/0:16,0:16:48.16:0,48,719	0/0:16,0:16:47.77:0,48,647	0/0:20,0:20:60.20:0,60,899	0/0:21,0:21:63.19:0,63,904	0/0:15,0:15:42.12:0,42,592	1/1:0,21:21:63.20:817,63,0	0/0:25,0:25:75.25:0,75,1123	0/0:13,0:13:39.13:0,39,585	0/0:25,0:25:75.24:0,75,1103	0/0:16,0:16:48.15:0,48,701	0/0:21,0:21:63.20:0,63,926	0/0:16,0:16:48.16:0,48,718	0/0:24,0:24:72.24:0,72,1077	0/0:16,0:16:45.15:0,45,675	0/0:21,0:21:60.16:0,60,874	0/0:25,0:25:66.22:0,66,986	0/0:16,0:16:48.15:0,48,695	0/0:26,0:26:75.25:0,75,1123	0/0:7,0:6:18.06:0,18,268	0/0:10,0:10:30.10:0,30,450	0/0:18,0:18:54.14:0,54,783	0/0:11,0:11:33.11:0,33,495	0/0:7,0:7:21.04:0,21,273	0/0:23,0:23:69.23:0,69,1034	0/0:25,0:25:75.24:0,75,1105	1/1:0,8:8:24.08:311,24,0
chr10	95243264	.	AGTAT	A	2117.32	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.619;DP=871;FS=8.803;HRun=0;HaplotypeScore=170.0035;InbreedingCoeff=0.9977;MQ=68.93;MQ0=2;MQRankSum=5.614;QD=34.15;ReadPosRankSum=-1.463;VQSLOD=3.1124;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,108,2171	0/0:9,0:9:24.06:0,24,525	0/0:25,0:18:36.09:0,36,569	0/0:21,0:18:27.09:0,27,511	0/0:52,0:52:99:0,144,3138	0/0:28,0:27:75.24:0,75,1630	0/0:35,0:35:93.25:0,93,1696	1/1:1,39:40:99:1724,112,0	0/0:34,0:34:90.29:0,90,1903	0/0:43,0:43:91.47:0,91,1018	0/0:26,0:26:29.26:0,29,408	0/0:22,0:22:60.19:0,60,1291	0/0:33,0:33:87.28:0,87,1973	0/0:18,0:18:45.15:0,45,1083	0/0:34,0:34:93.32:0,93,2185	0/0:25,0:25:69.21:0,69,1503	0/0:23,0:23:63.13:0,63,1197	0/0:24,0:24:51.12:0,51,1005	0/0:29,0:28:58.99:0,59,637	0/0:37,0:37:38.49:0,38,562	0/0:37,0:37:62.84:0,63,867	0/0:29,0:29:81.26:0,81,1751	0/0:31,0:31:81.73:0,82,1725	0/0:25,0:25:54.15:0,54,1098	0/0:35,0:35:90.23:0,90,1693	0/0:30,0:30:62.27:0,62,794	0/0:48,0:48:43.74:0,44,825	1/1:3,19:22:30.10:515,30,0
chr10	95243282	.	CATGT	C	5752.65	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.556;DP=901;FS=0.368;HRun=0;HaplotypeScore=172.1252;InbreedingCoeff=0.9864;MQ=59.06;MQ0=7;MQRankSum=2.600;QD=21.07;ReadPosRankSum=4.225;VQSLOD=4.6412;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:65.99:0,66,1454	0/0:9,0:9:24.08:0,24,505	0/0:35,0:15:20.88:0,21,275	0/0:18,0:13:11.92:0,12,116	0/0:52,1:53:71.42:0,71,2531	0/0:27,0:26:63.22:0,63,1384	0/0:30,0:30:42.13:0,42,856	0/0:59,0:57:56.98:0,57,782	0/0:37,0:37:72.25:0,72,1643	1/1:15,30:45:41:1276,41,0	1/1:8,20:28:36.12:587,36,0	0/0:23,0:23:51.17:0,51,1193	0/0:34,0:34:87.30:0,87,1907	0/0:20,1:21:13.75:0,14,1056	0/0:40,0:40:99:0,102,2258	0/0:29,0:29:72.21:0,72,1505	0/0:21,0:21:39.08:0,39,824	0/0:22,0:22:42.08:0,42,834	1/1:11,13:23:39.13:624,39,0	1/1:12,31:44:45.14:734,45,0	1/1:18,19:37:42.14:685,42,0	0/0:31,0:31:66.21:0,66,1519	0/0:33,0:33:23.31:0,23,1464	0/0:24,0:24:42.14:0,42,891	0/0:32,0:32:57.20:0,57,1213	1/1:11,21:32:63.19:980,63,0	1/1:17,27:44:51.17:832,51,0	1/1:19,0:19:14.07:33,14,0
chr10	95244829	.	GGGAAGGAA	G	1167.12	PASS	AB=1.000;AC=13;AF=0.325;AN=40;BaseQRankSum=-1.698;DP=377;FS=12.327;HRun=0;HaplotypeScore=87.2862;InbreedingCoeff=0.6039;MQ=54.95;MQ0=41;MQRankSum=0.611;QD=9.34;ReadPosRankSum=1.468;VQSLOD=0.6901;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:18.04:0,18,248	./.	./.	./.	./.	0/0:6,0:5:6.02:0,6,98	0/0:8,0:4:3.01:0,3,35	./.	1/1:17,0:17:15.05:221,15,0	1/1:9,4:12:9.02:117,9,0	1/1:4,6:10:2.92:17,3,0	0/0:20,0:16:12.03:0,12,180	0/0:7,0:6:0:0,0,0	0/0:12,0:12:9.90:0,10,108	1/1:21,0:19:21.05:265,21,0	1/1:30,0:28:25.21:315,25,0	0/0:19,0:18:12.04:0,12,180	0/0:22,0:20:18.06:0,18,259	./.	./.	0/0:36,0:25:4.52:0,5,17	0/0:6,0:5:3.01:0,3,56	./.	0/0:10,0:7:6.02:0,6,97	1/1:24,0:18:21.06:329,21,0	0/1:10,0:10:39.09:51,0,39	0/0:11,0:11:7.15:0,7,34	0/0:5,0:4:5.99:0,6,60
chr10	95245068	.	C	CA	1602.33	PASS	AB=0.985;AC=35;AF=0.625;AN=56;BaseQRankSum=0.635;DP=465;FS=13.426;HRun=15;HaplotypeScore=73.1595;InbreedingCoeff=0.4881;MQ=73.86;MQ0=0;MQRankSum=-1.333;QD=4.75;ReadPosRankSum=-2.761;VQSLOD=-0.0592;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,28:37:15.58:219,16,0	0/1:7,0:7:14.85:20,0,15	0/0:22,0:18:2.80:0,3,77	0/0:9,0:7:5.67:0,6,31	1/1:14,1:23:19.41:118,19,0	0/1:11,1:12:9.06:9,0,56	0/1:20,0:20:43.26:43,0,51	1/1:20,0:19:17.04:87,17,0	1/1:3,10:14:18.84:148,19,0	1/1:13,1:18:23.04:132,23,0	1/1:3,0:11:20.51:126,21,0	0/0:15,0:15:7.78:0,8,42	0/0:17,0:17:1.49:0,1,6	0/0:13,0:13:1.85:0,2,8	1/1:6,9:15:5.99:51,6,0	1/1:4,11:15:11.95:95,12,0	0/0:31,0:32:8.37:0,8,157	0/0:11,0:13:16.14:0,16,93	1/1:18,0:19:26.38:175,26,0	1/1:3,0:12:23.03:129,23,0	1/1:12,0:25:9.21:57,9,0	0/0:6,0:6:2.89:0,3,18	0/1:5,0:5:0:0,0,0	0/1:23,0:23:4.18:4,0,74	1/1:2,17:19:10.23:77,10,0	1/1:9,1:16:17.44:103,17,0	1/1:13,0:15:26.03:150,26,0	1/1:11,0:10:7.49:33,7,0
chr10	95245745	.	AT	A	1314.51	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.371;DP=535;FS=6.574;HRun=1;HaplotypeScore=48.9407;InbreedingCoeff=0.9935;MQ=74.04;MQ0=0;MQRankSum=-2.993;QD=35.53;ReadPosRankSum=-4.348;VQSLOD=1.5963;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.17:0,66,981	0/0:8,0:8:24.08:0,24,383	0/0:13,0:13:39.11:0,39,590	0/0:12,0:12:33.11:0,33,515	0/0:26,0:26:78.24:0,78,1199	0/0:22,0:22:66.21:0,66,1024	0/0:14,0:14:42.11:0,42,622	1/1:0,28:28:84.26:1141,84,0	0/0:21,0:21:63.21:0,63,1007	0/0:31,0:31:93.32:0,93,1487	0/0:24,0:24:72.25:0,72,1143	0/0:23,0:23:69.22:0,69,1076	0/0:19,0:19:57.19:0,57,911	0/0:15,0:15:45.15:0,45,717	0/0:25,0:25:75.26:0,75,1196	0/0:17,0:17:51.16:0,51,790	0/0:27,0:27:81.25:0,81,1259	0/0:19,0:19:54.18:0,54,862	0/0:16,0:16:48.15:0,48,745	0/0:27,0:27:81.26:0,81,1269	0/0:7,0:7:21.07:0,21,330	0/0:17,0:17:51.14:0,51,747	0/0:21,0:21:63.21:0,63,1007	0/0:8,0:8:24.08:0,24,383	0/0:21,0:21:63.17:0,63,934	0/0:18,0:18:54.18:0,54,842	0/0:25,0:25:75.25:0,75,1165	1/1:0,9:9:21.07:294,21,0
chr10	95247077	.	C	CA	617.24	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.033;DP=466;FS=3.800;HRun=8;HaplotypeScore=44.9944;InbreedingCoeff=0.8937;MQ=62.05;MQ0=13;MQRankSum=-1.638;QD=19.29;ReadPosRankSum=-4.000;VQSLOD=2.2347;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.01:0,75,680	0/0:3,0:3:6:0,6,55	0/0:22,0:11:20.14:0,20,133	0/0:22,0:10:7.29:0,7,72	0/0:16,0:16:39.02:0,39,355	0/0:21,0:20:54.03:0,54,494	0/0:21,0:20:48.02:0,48,439	1/1:6,21:25:29.66:564,30,0	0/0:16,0:16:39.01:0,39,357	0/0:15,0:15:36.01:0,36,327	0/0:10,0:9:24:0,24,215	0/0:19,0:19:54.03:0,54,494	0/0:18,0:18:22.39:0,22,337	0/0:16,0:17:50.06:0,50,445	0/0:11,0:11:30.02:0,30,275	0/0:23,0:23:54.01:0,54,489	0/0:28,0:28:81.03:0,81,737	0/0:19,0:19:35.88:0,36,387	0/0:13,0:13:36.02:0,36,329	0/0:19,0:19:48:0,48,434	0/0:11,0:11:21.01:0,21,192	0/0:7,0:7:21.01:0,21,192	0/0:12,0:12:36.02:0,36,329	0/0:11,0:11:33.02:0,33,302	0/0:15,0:16:47.05:0,47,414	0/0:19,0:19:36:0,36,329	0/0:16,0:16:39.02:0,39,357	1/1:1,4:5:15.04:172,15,0
chr10	95247310	.	CCCAGAG	C	4644.65	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.505;DP=487;FS=1.001;HRun=0;HaplotypeScore=102.4935;InbreedingCoeff=0.9863;MQ=80.77;MQ0=0;MQRankSum=-10.928;QD=49.41;ReadPosRankSum=-0.586;VQSLOD=4.7044;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.32:0,93,3239	0/0:8,0:8:24.08:0,24,790	0/0:17,0:17:51.18:0,51,1679	0/0:13,0:13:36.12:0,36,1123	0/0:28,0:28:81.26:0,81,2641	0/0:23,0:23:66.23:0,66,2288	0/0:17,0:17:45.15:0,45,1459	0/0:28,0:28:81.28:0,81,2726	0/0:25,0:25:72.25:0,72,2563	1/1:2,11:13:36.12:808,36,0	1/1:1,5:6:9.03:212,9,0	0/0:18,0:18:54.19:0,54,1871	0/0:12,0:12:36.12:0,36,1283	0/0:25,0:25:72.23:0,72,2459	0/0:16,0:16:48.16:0,48,1653	0/0:9,0:9:24.08:0,24,793	0/0:29,0:29:84.27:0,84,2796	0/0:22,0:22:63.22:0,63,2135	1/1:2,9:11:27.09:593,27,0	1/1:2,10:12:24.04:515,24,0	1/1:2,13:15:26.96:471,27,0	0/0:15,0:15:42.14:0,42,1464	0/0:6,0:6:18.06:0,18,641	0/0:18,0:18:51.18:0,51,1818	0/0:18,0:18:54.19:0,54,1925	1/1:1,17:17:48.15:1053,48,0	1/1:4,15:19:42.14:991,42,0	0/0:13,0:13:39.13:0,39,1378
chr10	95247443	.	GCA	G	1877.91	PASS	AB=0.843;AC=20;AF=0.370;AN=54;BaseQRankSum=-0.514;DP=591;FS=14.631;HRun=0;HaplotypeScore=119.3303;InbreedingCoeff=0.4897;MQ=58.63;MQ0=15;MQRankSum=4.225;QD=6.50;ReadPosRankSum=3.482;VQSLOD=2.3475;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,12:23:20.89:216,21,0	0/0:12,0:12:30.10:0,30,457	./.	0/1:31,0:6:0:0,0,0	0/1:23,8:31:62.37:62,0,748	0/0:9,0:21:19.86:0,20,135	0/0:14,0:24:15.01:0,15,150	0/0:4,0:19:6.87:0,7,53	0/0:15,4:19:1.49:0,1,406	1/1:7,9:16:24.03:250,24,0	1/1:5,5:14:31.38:271,31,0	0/0:10,0:24:32.35:0,32,167	0/0:9,0:15:23.40:0,23,167	0/0:16,0:25:39.11:0,39,294	0/1:18,3:23:92.37:92,0,376	0/1:7,2:9:21.61:22,0,124	0/1:18,2:39:18.39:18,0,441	0/0:29,0:30:7.22:0,7,632	1/1:7,5:12:15.02:157,15,0	1/1:5,11:20:35.64:336,36,0	1/1:17,12:32:20.56:177,21,0	0/0:10,0:15:19.28:0,19,141	0/0:7,0:15:16.27:0,16,94	0/0:19,0:28:8.96:0,9,51	0/0:17,0:18:25.04:0,25,534	0/1:11,12:26:51.37:280,0,51	1/1:6,4:12:20.70:185,21,0	0/0:3,0:3:4.83:0,5,19
chr10	95250033	.	TA	T	824.76	PASS	AB=0.962;AC=5;AF=0.089;AN=56;BaseQRankSum=7.660;DP=599;FS=1.786;HRun=11;HaplotypeScore=60.8930;InbreedingCoeff=0.7258;MQ=76.93;MQ0=2;MQRankSum=-1.877;QD=11.30;ReadPosRankSum=-2.720;VQSLOD=2.5301;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,1:16:17.45:0,17,383	0/0:7,0:7:18.05:0,18,192	0/0:21,0:18:29.36:0,29,258	0/1:24,1:20:9.09:9,0,195	0/0:31,0:31:78.18:0,78,819	0/0:20,0:22:47.95:0,48,494	0/0:17,0:17:45.10:0,45,470	1/1:8,29:38:88.54:696,89,0	0/0:19,0:19:51.10:0,51,528	0/0:30,0:30:72.17:0,72,756	0/0:25,0:25:57.35:0,57,679	0/0:17,0:17:45.09:0,45,467	0/0:22,1:24:38.28:0,38,570	0/0:15,1:16:20.47:0,20,416	0/0:19,0:19:48.10:0,48,503	0/0:29,0:29:81.20:0,81,857	0/0:22,0:22:60.10:0,60,620	0/0:7,0:7:15.02:0,15,152	0/0:19,0:19:47.98:0,48,487	0/0:26,2:28:25.86:0,26,661	0/0:14,1:15:20.46:0,20,416	0/0:20,0:20:51.13:0,51,543	0/0:28,1:29:52.57:0,53,737	0/0:1,0:1:3.01:0,3,32	0/0:25,2:27:19.91:0,20,610	0/0:26,1:27:47.51:0,48,691	0/0:38,0:38:99:0,99,1040	1/1:0,10:10:29.97:246,30,0
chr10	95251040	.	G	GA	1060.04	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.609;DP=548;FS=7.769;HRun=8;HaplotypeScore=50.8416;InbreedingCoeff=0.9262;MQ=71.15;MQ0=0;MQRankSum=-1.254;QD=22.55;ReadPosRankSum=-4.165;VQSLOD=2.0374;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:45.01:0,45,412	0/0:10,0:10:27.01:0,27,247	0/0:11,0:11:23.99:0,24,219	0/0:4,0:4:3.63:0,4,10	0/0:37,0:37:87.03:0,87,796	0/0:27,0:27:75.03:0,75,681	0/0:17,0:17:45:0,45,405	1/1:9,27:36:81.22:924,81,0	0/0:20,0:20:48.02:0,48,439	0/0:16,0:16:42.01:0,42,381	0/0:28,0:28:75.04:0,75,686	0/0:11,0:11:27.01:0,27,247	0/0:29,0:29:75.02:0,75,682	0/0:22,0:22:56.48:0,56,521	0/0:14,0:14:39.02:0,39,357	0/0:23,0:23:69.04:0,69,631	0/0:16,0:16:35.75:0,36,329	0/0:13,0:13:30.01:0,30,273	0/0:19,0:19:54.02:0,54,491	0/0:32,0:32:75.02:0,75,686	0/0:16,0:16:45.02:0,45,412	0/0:11,0:11:30:0,30,270	0/0:20,0:20:48.01:0,48,439	0/0:12,0:12:33.02:0,33,302	0/0:26,1:27:32.86:0,33,543	0/0:17,0:17:51.03:0,51,466	0/0:31,0:31:84.01:0,84,758	1/1:3,7:11:23.90:257,24,0
chr10	95253389	.	TA	T	2764.21	PASS	AB=0.697;AC=17;AF=0.304;AN=56;BaseQRankSum=6.828;DP=673;FS=4.133;HRun=13;HaplotypeScore=86.8373;InbreedingCoeff=0.6770;MQ=71.20;MQ0=0;MQRankSum=0.742;QD=11.19;ReadPosRankSum=3.936;VQSLOD=3.6599;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:8,16:25:2.67:300,0,3	0/0:13,2:15:14.14:0,14,295	0/0:25,0:20:3.50:0,4,175	0/0:11,0:10:20.86:0,21,161	0/0:32,2:36:30.17:0,30,659	1/1:1,20:23:25.68:333,26,0	1/1:3,11:14:32.80:241,33,0	0/0:33,0:33:45.66:0,46,258	0/0:26,1:27:43.05:0,43,565	0/0:30,1:31:23.09:0,23,372	0/0:25,0:25:41.97:0,42,389	0/1:5,15:23:7.50:251,0,7	1/1:5,18:24:46.76:334,47,0	1/1:4,24:28:62.60:460,63,0	0/0:19,2:21:13.22:0,13,436	0/0:25,0:30:20.38:0,20,453	0/0:25,2:29:21.27:0,21,543	0/0:10,1:11:3:0,3,178	0/0:21,1:24:10.94:0,11,351	0/0:26,2:28:35.16:0,35,494	0/0:12,2:14:2.13:0,2,182	1/1:5,27:32:65.44:477,65,0	1/1:12,22:35:9.70:352,10,0	1/1:4,10:15:5.67:196,6,0	0/0:25,0:27:40.09:0,40,353	0/1:25,2:28:12.31:12,0,338	0/0:26,2:27:38.16:0,38,524	0/0:5,0:11:17.02:0,17,85
chr10	95258751	.	C	CGT	283.30	PASS	AB=0.975;AC=14;AF=0.500;AN=28;BaseQRankSum=-2.931;DP=577;FS=3.333;HRun=0;HaplotypeScore=94.2910;InbreedingCoeff=0.5249;MQ=65.22;MQ0=22;MQRankSum=2.848;QD=1.62;ReadPosRankSum=-2.848;VQSLOD=0.6595;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:1.55:4,2,0	./.	./.	./.	./.	1/1:13,3:16:5.98:63,6,0	0/1:18,1:19:0.01:0,0,0	./.	0/0:11,0:13:5.55:0,6,28	0/0:20,0:20:2.84:0,3,14	./.	./.	1/1:10,0:10:15.02:170,15,0	./.	./.	./.	0/0:23,0:23:13.25:0,13,94	1/1:17,1:18:10.21:90,10,0	./.	./.	0/1:40,0:38:0:0,0,0	./.	1/1:13,0:12:3.01:38,3,0	1/1:21,1:25:3:26,3,0	./.	0/0:25,0:25:2.51:0,3,14	0/0:8,0:15:17.04:0,17,84	0/0:17,0:17:2.49:0,2,31
chr10	95259905	.	TAA	T	2888.37	PASS	AB=0.698;AC=39;AF=0.696;AN=56;BaseQRankSum=4.425;DP=602;FS=0.000;HRun=17;HaplotypeScore=84.2273;InbreedingCoeff=0.3158;MQ=66.79;MQ0=1;MQRankSum=0.274;QD=5.82;ReadPosRankSum=6.982;VQSLOD=-0.5087;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:51:8.86:0,9,565	1/1:2,2:4:2.90:24,3,0	0/0:14,0:11:11.93:0,12,100	0/0:13,0:10:0.19:0,0,45	0/1:30,3:45:4.42:158,0,4	1/1:11,6:27:30.93:227,31,0	1/1:11,6:27:26.45:295,26,0	0/1:7,4:16:32.59:82,0,33	1/1:13,0:19:17.57:101,18,0	0/1:8,6:19:1.36:94,0,1	1/1:15,8:24:29.18:225,29,0	1/1:11,3:19:19.26:114,19,0	1/1:22,3:37:5.63:106,6,0	1/1:8,7:20:5.29:153,5,0	0/1:19,5:31:81.79:116,0,82	1/1:7,9:16:23.61:190,24,0	0/0:18,1:22:23.57:0,24,353	0/0:6,0:6:11.97:0,12,99	0/1:11,1:14:22.12:22,0,37	1/1:11,4:24:9.22:137,9,0	1/1:6,4:11:16.89:126,17,0	1/1:13,5:21:12.13:101,12,0	0/1:13,4:22:0.79:140,0,1	1/1:7,5:21:30.99:183,31,0	0/1:8,8:20:0.91:73,0,1	1/1:11,7:19:17.50:181,17,0	1/1:19,14:33:0.48:142,0,0	1/1:1,3:5:2.75:63,3,0
chr10	95260377	.	TAAGC	T	7934.49	PASS	AC=46;AF=0.852;AN=54;BaseQRankSum=5.914;DP=446;FS=1.857;HRun=0;HaplotypeScore=87.7446;InbreedingCoeff=0.7684;MQ=55.44;MQ0=12;MQRankSum=1.199;QD=20.34;ReadPosRankSum=1.030;VQSLOD=4.6657;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,15:19:27.09:439,27,0	1/1:1,5:6:6.02:98,6,0	0/0:11,0:5:6.02:0,6,110	0/0:17,0:5:5.30:0,5,98	1/1:6,17:23:30.10:432,30,0	1/1:14,0:21:18.05:243,18,0	1/1:8,0:8:9.03:133,9,0	1/1:11,18:26:41.10:764,41,0	1/1:2,15:17:24.08:390,24,0	1/1:12,12:24:36.11:525,36,0	1/1:10,11:21:15.05:213,15,0	1/1:9,0:10:15.05:214,15,0	1/1:7,0:14:26.20:321,26,0	1/1:8,0:8:15.05:203,15,0	1/1:5,24:29:39.13:635,39,0	1/1:6,17:23:30.10:488,30,0	0/0:15,0:15:33.11:0,33,731	0/0:9,0:9:15.05:0,15,324	1/1:10,5:14:15.05:232,15,0	1/1:8,14:22:24.08:362,24,0	1/1:2,15:17:15.05:244,15,0	./.	1/1:2,0:4:3.01:32,3,0	1/1:1,0:3:6.02:66,6,0	1/1:7,8:15:18.06:293,18,0	1/1:6,25:31:75.21:1126,75,0	1/1:10,15:25:23.71:386,24,0	1/1:6,0:6:6.02:96,6,0
chr10	95260379	.	AGC	A	403.75	PASS	AB=0.876;AC=15;AF=0.268;AN=56;BaseQRankSum=11.030;DP=437;FS=10.854;HRun=0;HaplotypeScore=96.3605;InbreedingCoeff=-0.2271;MQ=55.49;MQ0=13;MQRankSum=0.259;QD=1.86;ReadPosRankSum=9.638;VQSLOD=-0.4715;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:16.50:16,0,107	0/0:6,0:6:3.38:0,3,123	0/0:12,0:5:12.04:0,12,210	0/1:17,0:5:23.06:23,0,173	0/0:23,0:23:18.24:0,18,396	0/1:13,7:20:68.71:69,0,94	0/1:3,5:8:45.26:45,0,48	0/0:29,0:26:11.89:0,12,365	0/1:17,0:17:16.67:17,0,68	0/0:23,0:23:3.77:0,4,450	0/0:21,0:21:36.58:0,37,579	0/1:6,3:9:16.06:118,0,16	1/1:8,6:14:6.21:98,6,0	0/1:3,5:8:4:72,0,4	0/1:29,0:29:21.66:22,0,182	0/1:23,0:23:10.19:10,0,227	0/0:15,0:15:45.15:0,45,847	0/0:6,0:6:18.06:0,18,349	0/0:15,0:14:5.42:0,5,344	0/0:21,0:21:12.05:0,12,324	0/1:17,0:17:8.04:8,0,65	0/0:2,2:4:5.91:0,6,39	0/1:2,2:4:5.83:6,0,33	0/1:3,0:3:18.16:18,0,24	0/0:14,0:14:0.97:0,1,235	0/1:29,0:29:30.01:30,0,153	0/0:25,0:25:10.42:0,10,408	0/0:6,0:6:7.57:0,8,169
chr10	95260767	.	AGAG	A	1101.96	PASS	AB=0.947;AC=22;AF=0.423;AN=52;BaseQRankSum=-0.597;DP=483;FS=6.920;HRun=0;HaplotypeScore=88.4940;InbreedingCoeff=-0.2670;MQ=34.70;MQ0=109;MQRankSum=-3.711;QD=3.51;ReadPosRankSum=4.463;VQSLOD=0.7283;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:21:31.01:31,0,140	0/0:7,0:7:5.71:0,6,41	./.	./.	1/1:17,0:16:3.48:34,3,0	0/1:24,1:20:64.20:64,0,121	0/0:10,1:8:4.22:0,4,100	1/1:20,0:13:27.88:122,28,0	0/1:17,0:13:5.87:39,0,6	0/1:17,0:14:15.88:16,0,153	0/0:26,0:25:2.17:0,2,43	0/1:14,1:14:90.29:111,0,90	0/1:16,7:20:99:146,0,180	0/1:15,0:13:50.33:121,0,50	1/1:9,0:9:1.37:3,1,0	0/1:10,0:10:1.94:2,0,89	0/1:16,0:13:0.28:0,0,126	0/0:14,0:7:7.23:0,7,52	0/1:16,0:14:96.17:138,0,96	1/1:14,0:14:2.34:7,2,0	0/0:13,0:10:2.46:0,2,71	0/1:9,2:10:56.81:57,0,65	0/1:12,2:13:96.14:108,0,96	0/1:26,3:23:99:232,0,118	0/0:17,0:16:0.90:0,1,21	0/1:21,0:18:8.88:9,0,149	0/0:13,0:12:7.38:0,7,172	0/0:3,0:1:2.92:0,3,17
chr10	95260769	.	AG	A	926.88	PASS	AB=0.944;AC=24;AF=0.462;AN=52;BaseQRankSum=-0.659;DP=479;FS=2.743;HRun=1;HaplotypeScore=78.9033;InbreedingCoeff=-0.3274;MQ=35.19;MQ0=105;MQRankSum=-5.608;QD=2.89;ReadPosRankSum=3.541;VQSLOD=-0.0374;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:21:28.98:29,0,135	1/1:7,0:7:1.55:4,2,0	./.	./.	1/1:15,0:14:3.74:14,4,0	0/1:19,6:20:31.68:32,0,121	0/0:10,0:7:4.15:0,4,82	1/1:22,0:15:32.46:139,32,0	0/1:11,5:13:5.63:80,0,6	0/1:16,0:13:23.39:23,0,51	0/0:26,0:25:2.45:0,2,28	0/1:12,3:14:99:158,0,108	0/1:21,1:20:62.81:63,0,180	0/1:16,0:14:53.68:54,0,69	1/1:9,0:9:0.43:1,0,0	0/1:10,0:10:26.92:27,0,33	0/1:17,0:14:39.42:39,0,124	0/0:15,0:8:10.17:0,10,75	0/1:16,0:14:67.36:138,0,67	1/1:14,0:14:1.70:5,2,0	0/0:12,1:10:2.69:0,3,45	0/1:9,1:10:47.79:48,0,65	0/1:15,0:14:64.99:65,0,114	0/1:30,0:25:91.19:91,0,157	0/0:15,0:14:1.99:0,2,12	0/1:20,1:18:44.07:57,0,44	0/0:11,0:10:4.43:0,4,116	0/0:3,0:1:2.94:0,3,18
chr10	95260770	.	GAAAGAAAAGAAA	G	1871.53	PASS	AB=1.000;AC=30;AF=0.577;AN=52;BaseQRankSum=1.323;DP=473;FS=0.000;HRun=0;HaplotypeScore=122.0964;InbreedingCoeff=0.5298;MQ=35.49;MQ0=105;MQRankSum=-5.716;QD=7.67;ReadPosRankSum=4.538;VQSLOD=1.5746;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:21:30.09:0,30,1118	1/1:2,0:7:6.41:55,6,0	./.	./.	1/1:14,0:13:2.85:10,3,0	0/0:25,0:20:17.84:0,18,549	0/1:10,0:7:1.66:2,0,344	1/1:22,0:15:6.04:166,6,0	1/1:15,0:13:11.69:127,12,0	1/1:10,5:12:15.48:275,15,0	1/1:9,17:25:1.57:4,2,0	0/1:14,0:14:4.06:4,0,568	0/1:22,0:20:2.82:3,0,868	0/1:16,0:14:6.60:7,0,364	1/1:10,0:10:0.69:1,1,0	1/1:8,0:9:13.66:206,14,0	0/0:18,0:15:3.43:0,3,753	0/0:15,0:8:10.84:0,11,111	1/1:5,11:14:33.56:444,34,0	1/1:13,0:13:3.30:15,3,0	0/0:13,0:10:8.15:0,8,31	0/0:10,0:10:14.20:0,14,438	0/0:15,0:14:8.38:0,8,597	0/0:27,0:25:12.81:0,13,857	0/0:14,0:13:1.79:0,2,13	1/1:20,0:17:31.41:366,31,0	1/1:10,0:9:12.98:346,13,0	1/1:3,0:1:2.68:11,3,0
chr10	95260774	.	GAAAAGAAAAGAAAAGAAAAGAAAAGAAA	G	363.79	PASS	AB=0.865;AC=3;AF=0.058;AN=52;BaseQRankSum=2.734;DP=452;FS=3.676;HRun=0;HaplotypeScore=202.8232;InbreedingCoeff=0.1516;MQ=38.03;MQ0=98;MQRankSum=-2.409;QD=12.13;ReadPosRankSum=0.892;VQSLOD=2.5858;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:23:53.46:0,53,4370	0/1:5,0:5:0:13,0,0	./.	./.	0/0:8,8:15:4.78:0,5,15	0/0:22,0:19:27.09:0,27,2560	0/0:11,0:8:21.03:0,21,1678	0/0:20,0:13:24.08:0,24,1115	0/1:9,7:13:99:206,0,180	0/0:9,0:8:14.26:0,14,550	0/0:22,0:21:6.45:0,6,174	0/0:16,0:15:42.10:0,42,2579	0/0:24,0:22:45.29:0,45,3946	0/0:16,0:14:30.09:0,30,1768	0/0:5,8:13:7.30:0,7,22	0/1:8,1:9:13.95:242,0,14	0/0:18,0:16:28.34:0,28,2809	0/0:13,0:8:12.04:0,12,755	0/0:14,0:13:24.36:0,24,701	0/0:7,0:10:17.48:0,17,517	0/0:10,0:8:12.48:0,12,408	0/0:14,0:14:35.44:0,35,2672	0/0:14,0:13:31.40:0,31,2184	0/0:27,0:24:36.67:0,37,3305	0/0:5,8:13:5.19:0,5,14	0/0:11,0:11:14.98:0,15,535	0/0:6,0:8:17.91:0,18,419	0/0:0,0:2:3.01:0,3,171
chr10	95267026	.	CA	C	5694.03	PASS	AB=0.975;AC=40;AF=0.714;AN=56;BaseQRankSum=-2.794;DP=500;FS=4.301;HRun=11;HaplotypeScore=64.6129;InbreedingCoeff=0.6225;MQ=60.73;MQ0=2;MQRankSum=1.213;QD=14.27;ReadPosRankSum=0.316;VQSLOD=5.2143;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,12:19:22.10:268,22,0	0/1:12,0:12:4.03:4,0,47	0/1:16,2:13:45.28:45,0,127	0/0:17,0:8:11.90:0,12,102	0/1:13,0:13:22.38:56,0,22	1/1:4,19:23:37.08:359,37,0	1/1:1,8:9:17.98:148,18,0	1/1:10,22:33:64.17:518,64,0	0/0:15,0:15:8.56:0,9,56	1/1:4,21:25:64.87:510,65,0	1/1:6,20:26:59.92:493,60,0	1/1:2,15:18:37.98:301,38,0	1/1:6,15:23:10.97:275,11,0	1/1:1,18:20:40.97:326,41,0	0/0:10,0:10:8.15:0,8,34	0/0:11,0:11:19.08:0,19,96	0/0:23,2:25:32.19:0,32,491	0/0:23,0:23:58.79:0,59,580	1/1:4,12:16:6.96:264,7,0	1/1:3,22:25:33.95:485,34,0	1/1:1,11:12:29.96:246,30,0	1/1:2,12:14:29.96:246,30,0	1/1:6,13:19:32.94:271,33,0	1/1:2,5:7:8.98:74,9,0	0/1:17,0:17:10.04:26,0,10	1/1:5,15:21:46.95:375,47,0	1/1:3,12:17:37.03:283,37,0	1/1:4,8:11:14.95:123,15,0
chr10	95267027	.	A	AAAAAC	3540.04	PASS	AB=0.972;AC=27;AF=0.482;AN=56;BaseQRankSum=-8.904;DP=505;FS=0.000;HRun=0;HaplotypeScore=107.3238;InbreedingCoeff=-0.1929;MQ=60.62;MQ0=2;MQRankSum=2.328;QD=9.12;ReadPosRankSum=-5.816;VQSLOD=-0.3639;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:81.03:81,0,309	1/1:1,11:12:18.04:416,18,0	0/0:18,0:13:25.28:0,25,310	0/0:17,0:8:11.50:0,12,96	1/1:2,10:14:20.95:359,21,0	0/1:23,0:23:23.42:23,0,419	0/1:9,0:9:6.64:7,0,156	0/1:33,0:33:99:199,0,397	1/1:3,12:16:24.06:683,24,0	0/1:25,0:25:99:220,0,292	0/1:26,0:26:57.05:57,0,543	0/1:18,0:18:25.88:26,0,400	0/0:22,0:22:29.30:0,29,548	0/1:20,0:20:4.17:4,0,433	1/1:2,9:11:9.02:219,9,0	0/1:1,10:11:10.88:494,0,11	0/0:25,0:25:59.47:0,59,800	0/0:24,0:24:61.91:0,62,936	0/1:16,0:16:84.11:84,0,255	0/1:25,0:25:81.21:81,0,516	0/1:12,0:12:65.50:65,0,217	0/1:17,0:17:37.76:38,0,280	0/1:19,0:19:78.10:78,0,280	0/1:7,0:7:12.65:13,0,82	1/1:1,16:17:12.04:343,12,0	0/1:22,0:22:13.78:14,0,541	0/1:17,0:17:35.72:36,0,347	0/0:11,0:10:21.04:0,21,237
chr10	95270331	.	A	AATAC	9589.44	PASS	AB=0.700;AC=19;AF=0.365;AN=52;BaseQRankSum=-14.121;DP=687;FS=7.417;HRun=0;HaplotypeScore=179.7817;InbreedingCoeff=0.8726;MQ=61.44;MQ0=3;MQRankSum=13.367;QD=34.87;ReadPosRankSum=-0.417;VQSLOD=4.4285;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,11:25:27.56:636,28,0	0/0:5,0:13:18.02:0,18,168	./.	./.	0/0:8,0:32:24.01:0,24,219	0/0:10,0:20:18.02:0,18,167	0/0:9,0:15:6.11:0,6,36	0/0:22,0:25:10.79:0,11,59	0/0:15,0:29:18.02:0,18,165	1/1:13,15:31:60.18:1281,60,0	1/1:11,21:34:57.19:1287,57,0	0/0:6,0:26:21.39:0,21,176	0/0:13,0:24:18.02:0,18,167	0/0:10,0:22:15.02:0,15,138	0/0:9,0:30:45.05:0,45,419	0/0:9,0:23:27.03:0,27,252	1/1:8,6:14:9.03:211,9,0	0/1:8,6:14:1.53:403,0,2	1/1:12,10:21:30.10:694,30,0	1/1:11,23:35:63.22:1451,63,0	1/1:5,14:20:21.07:494,21,0	0/0:14,0:37:40.76:0,41,365	0/0:10,0:32:22.85:0,23,180	0/0:5,0:10:0.43:0,0,48	0/0:6,0:36:59.20:0,59,538	1/1:13,25:41:90.26:1950,90,0	1/1:16,19:39:51.18:1181,51,0	0/0:6,0:11:24.03:0,24,224
chr10	95271310	.	C	CA	2584.65	PASS	AB=0.690;AC=14;AF=0.250;AN=56;BaseQRankSum=-6.746;DP=649;FS=102.670;HRun=0;HaplotypeScore=85.7667;InbreedingCoeff=-0.3271;MQ=75.13;MQ0=0;MQRankSum=-11.209;QD=7.65;ReadPosRankSum=0.168;VQSLOD=-0.0563;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,1720	0/1:5,5:10:23.83:157,0,24	0/0:20,0:20:56.64:0,57,756	0/1:12,0:12:6.96:7,0,290	0/1:18,25:43:99:125,0,276	0/0:29,0:29:84.28:0,84,1171	0/0:13,0:13:39.13:0,39,543	0/0:20,0:20:54.17:0,54,723	0/1:7,10:17:99:124,0,173	0/1:24,17:41:99:649,0,830	0/1:14,17:31:99:216,0,248	0/0:17,0:17:51.16:0,51,694	0/0:31,0:31:90.02:0,90,1208	0/0:18,0:18:54.15:0,54,707	0/1:9,11:20:87.82:88,0,212	0/1:11,10:21:99:131,0,152	0/0:30,0:30:87.25:0,87,1191	0/0:10,0:10:27.09:0,27,372	0/1:16,5:21:99:206,0,524	0/1:21,14:35:65.43:65,0,335	0/1:4,7:11:25.08:25,0,152	0/0:26,0:26:72.22:0,72,987	0/0:19,0:19:56.94:0,57,709	0/0:17,0:17:45.11:0,45,606	0/1:8,12:20:21.94:22,0,111	0/1:12,9:21:99:367,0,436	0/1:11,24:35:99:559,0,213	0/0:18,0:18:54.18:0,54,753
chr10	95273529	.	G	GAC	14926.65	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-15.671;DP=701;FS=5.957;HRun=0;HaplotypeScore=80.7686;InbreedingCoeff=1.0000;MQ=87.50;MQ0=2;MQRankSum=-3.213;QD=46.21;ReadPosRankSum=3.620;VQSLOD=6.4365;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.25:0,93,1245	1/1:2,11:13:33.11:583,33,0	0/0:24,0:24:57.16:0,57,756	0/0:30,0:30:59.61:0,60,821	1/1:3,29:31:81.28:1458,81,0	0/0:19,0:19:57.19:0,57,798	0/0:20,0:20:57.18:0,57,781	0/0:40,0:40:99:0,111,1526	1/1:3,30:33:90.31:1620,90,0	1/1:0,32:33:99:1731,99,0	1/1:0,20:20:48.16:864,48,0	0/0:21,0:21:60.20:0,60,840	0/0:29,0:29:81.27:0,81,1134	0/0:23,0:23:66.22:0,66,923	1/1:3,32:35:93.32:1670,93,0	1/1:1,19:20:48.16:864,48,0	0/0:26,0:26:78.23:0,78,1057	0/0:22,0:21:63.21:0,63,882	1/1:3,17:20:51.14:841,51,0	1/1:2,22:25:57.19:1009,57,0	1/1:2,18:20:54.19:970,54,0	0/0:30,0:30:81.27:0,81,1134	0/0:22,0:22:63.21:0,63,882	0/0:18,0:18:51.17:0,51,714	1/1:0,23:23:48.16:863,48,0	1/1:0,22:23:69.23:1215,69,0	1/1:2,24:26:69.24:1239,69,0	0/0:21,0:21:63.21:0,63,882
chr10	95273865	.	GA	G	4153.42	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.042;DP=264;FS=30.650;HRun=3;HaplotypeScore=41.2890;InbreedingCoeff=0.5230;MQ=62.35;MQ0=19;MQRankSum=-4.240;QD=19.32;ReadPosRankSum=2.628;VQSLOD=1.8442;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,8:9:15.05:185,15,0	1/1:0,6:6:12.51:149,13,0	0/0:28,0:10:21.86:0,22,273	0/0:20,1:8:22.69:0,23,268	1/1:1,12:12:5.63:73,6,0	1/1:1,10:11:21.07:259,21,0	1/1:3,10:11:30:325,30,0	1/1:3,3:3:6.02:74,6,0	1/1:1,9:8:21.07:259,21,0	1/1:1,8:8:21.02:233,21,0	1/1:0,10:10:11.91:111,12,0	1/1:1,6:4:11.98:130,12,0	1/1:0,2:2:3.01:37,3,0	1/1:1,4:3:3.01:37,3,0	1/1:0,4:4:11.97:129,12,0	1/1:2,4:6:11.98:130,12,0	1/1:1,6:3:9.03:111,9,0	1/1:2,4:5:9.03:111,9,0	1/1:8,7:8:21.07:260,21,0	1/1:2,6:8:2.94:18,3,0	1/1:5,3:4:3.01:37,3,0	1/1:1,4:5:6.02:74,6,0	1/1:0,6:4:8.96:92,9,0	1/1:0,4:4:9.03:111,9,0	1/1:1,18:17:39.04:447,39,0	1/1:1,8:9:24.03:279,24,0	1/1:1,11:12:30.09:369,30,0	1/1:0,4:3:9.03:111,9,0
chr10	95273945	.	AGAG	A	3618.98	PASS	AB=0.830;AC=29;AF=0.558;AN=52;BaseQRankSum=7.750;DP=554;FS=25.687;HRun=0;HaplotypeScore=72.7840;InbreedingCoeff=-0.5363;MQ=30.59;MQ0=116;MQRankSum=-1.164;QD=7.01;ReadPosRankSum=8.130;VQSLOD=0.4434;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:31,13:28:99:399,0,292	0/0:9,0:7:14.90:0,15,334	./.	./.	0/1:20,4:14:99:132,0,118	0/1:14,7:19:99:224,0,113	0/1:27,4:13:99:114,0,396	0/0:19,0:4:9.03:0,9,174	1/1:8,5:9:9.03:147,9,0	0/1:26,3:10:70.85:71,0,440	0/1:9,1:6:39.90:40,0,125	0/1:19,5:19:99:126,0,190	0/1:7,9:14:42.59:319,0,43	0/1:12,6:13:45.73:273,0,46	0/1:16,4:17:99:126,0,246	0/1:7,4:10:99:178,0,116	1/1:18,7:14:12.04:196,12,0	0/1:13,3:8:57.61:89,0,58	0/1:10,2:4:74.87:86,0,75	0/1:24,5:23:99:157,0,550	1/1:19,9:13:15.05:245,15,0	0/1:15,3:11:79.80:80,0,249	0/1:18,2:13:79.82:80,0,249	1/1:16,4:12:9.03:147,9,0	0/1:20,4:22:73.81:74,0,374	0/1:27,5:18:99:145,0,791	0/1:21,4:17:99:126,0,246	1/1:5,1:5:3.01:49,3,0
chr10	95274037	.	TC	T	5022.09	PASS	AC=48;AF=1.000;AN=48;DP=249;FS=0.000;HRun=4;HaplotypeScore=34.3617;InbreedingCoeff=-0.0304;MQ=25.73;MQ0=33;QD=21.65;VQSLOD=3.3027;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,5:6:12.04:142,12,0	1/1:1,8:8:21.06:249,21,0	./.	./.	1/1:1,13:13:33.10:386,33,0	1/1:0,7:7:18.06:215,18,0	1/1:3,6:6:15.04:177,15,0	1/1:8,4:1:3.01:36,3,0	1/1:2,6:6:12.04:142,12,0	1/1:3,10:8:24.07:287,24,0	1/1:0,9:9:24.07:284,24,0	1/1:0,12:10:21.06:250,21,0	1/1:0,12:11:30.09:358,30,0	1/1:4,5:6:12.04:143,12,0	1/1:2,10:10:15.04:175,15,0	1/1:2,4:6:9.03:108,9,0	./.	1/1:0,3:2:3.01:36,3,0	1/1:3,6:6:18.06:215,18,0	1/1:1,11:11:21.06:251,21,0	./.	1/1:1,14:14:33.10:394,33,0	1/1:0,8:8:21.06:246,21,0	1/1:2,3:3:6.02:71,6,0	1/1:2,7:6:15.05:177,15,0	1/1:2,5:4:12.04:144,12,0	1/1:3,14:14:33.10:392,33,0	1/1:0,6:5:12.04:144,12,0
chr10	95281288	.	CGAGAGAGA	C	2616.54	PASS	AB=0.793;AC=30;AF=0.577;AN=52;BaseQRankSum=6.172;DP=556;FS=16.025;HRun=0;HaplotypeScore=143.9960;InbreedingCoeff=0.5148;MQ=70.73;MQ0=11;MQRankSum=-5.490;QD=8.33;ReadPosRankSum=0.348;VQSLOD=1.8390;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,4:16:37.59:120,0,38	1/1:6,0:10:9.03:168,9,0	./.	0/0:39,0:17:0.47:0,0,1	1/1:19,0:24:9.03:168,9,0	1/1:17,6:24:9.03:206,9,0	1/1:10,4:14:9.03:225,9,0	0/0:23,0:23:12.04:0,12,467	1/1:11,0:17:15.05:279,15,0	0/0:16,0:16:8.92:0,9,182	0/0:16,0:19:11.99:0,12,135	1/1:13,4:16:3.01:75,3,0	1/1:15,3:18:9.03:225,9,0	1/1:15,8:24:15.05:356,15,0	1/1:18,0:30:18.06:335,18,0	1/1:9,0:13:12.04:223,12,0	0/0:16,0:20:19.58:0,20,245	0/0:13,0:20:11.13:0,11,216	0/0:11,0:10:5.23:0,5,50	0/1:10,0:14:0.86:1,0,107	0/0:21,0:27:15.02:0,15,199	./.	1/1:13,0:13:3:27,3,0	1/1:11,5:17:9.03:187,9,0	1/1:13,0:17:9.03:168,9,0	0/1:14,0:14:6.78:7,0,122	0/1:15,0:28:23.58:24,0,106	0/0:11,0:16:3.01:0,3,104
chr10	95282950	.	C	CT	2554.30	PASS	AB=0.944;AC=18;AF=0.321;AN=56;BaseQRankSum=-1.475;DP=519;FS=0.966;HRun=10;HaplotypeScore=126.0085;InbreedingCoeff=0.8595;MQ=47.99;MQ0=16;MQRankSum=-0.309;QD=13.81;ReadPosRankSum=0.552;VQSLOD=3.0224;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:61.94:0,62,497	0/0:1,0:3:4.07:0,4,12	0/1:10,0:4:0.01:0,0,0	0/0:5,0:5:6.86:0,7,47	0/0:3,0:27:38.68:0,39,112	1/1:5,16:20:45.11:480,45,0	1/1:10,13:20:11.46:327,11,0	0/0:25,0:24:47.91:0,48,394	0/0:4,0:18:24.91:0,25,72	0/0:25,0:24:59.92:0,60,493	0/0:7,0:7:14.96:0,15,121	1/1:4,10:13:21.05:224,21,0	1/1:7,11:17:18.05:192,18,0	1/1:8,14:22:14.46:359,14,0	0/0:1,0:11:21.93:0,22,63	0/0:0,0:17:31.63:0,32,91	0/0:29,0:26:62.92:0,63,517	0/0:16,0:14:30.98:0,31,227	0/0:16,0:18:29.88:0,30,230	0/0:30,0:28:53.80:0,54,441	0/0:16,0:15:22.94:0,23,177	1/1:7,16:22:38.97:373,39,0	1/1:7,11:18:27.07:288,27,0	1/1:4,16:19:48.12:508,48,0	0/0:6,0:19:24.22:0,24,69	0/0:14,0:14:32.95:0,33,270	0/1:14,2:14:5.04:5,0,170	0/0:17,0:16:41.94:0,42,345
chr10	95285752	.	CTGTGTGTGTGTGTGTGTGTG	C	734.41	PASS	AB=0.958;AC=11;AF=0.212;AN=52;BaseQRankSum=0.627;DP=565;FS=10.850;HRun=0;HaplotypeScore=256.8033;InbreedingCoeff=0.1701;MQ=66.63;MQ0=26;MQRankSum=-3.496;QD=3.60;ReadPosRankSum=-1.393;VQSLOD=0.9057;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:31.75:0,32,850	0/0:7,0:7:8.96:0,9,70	0/1:32,0:21:0:0,0,0	./.	0/0:10,0:10:5.19:0,5,19	0/0:27,0:25:27.08:0,27,1844	0/0:18,0:15:18.04:0,18,609	0/1:33,0:32:22.74:23,0,101	0/0:18,0:15:10.88:0,11,59	1/1:18,0:17:0.94:51,1,0	0/1:13,0:12:4.35:4,0,4	0/0:20,0:19:25.22:0,25,1050	0/0:14,0:14:9.03:0,9,726	0/0:13,0:12:12.03:0,12,475	0/0:17,0:17:10.33:0,10,39	0/1:9,0:11:31.72:213,0,32	0/0:26,0:26:32.95:0,33,1456	0/0:17,0:17:30.02:0,30,1270	0/1:25,0:24:13.35:29,0,13	0/0:13,7:21:5.82:0,6,32	1/1:31,0:29:2.99:24,3,0	0/0:18,0:18:15.05:0,15,1187	0/0:17,0:17:30.04:0,30,1111	0/0:33,0:32:36.91:0,37,1532	./.	0/1:23,0:23:61.32:174,0,61	0/1:15,2:16:4.48:345,0,4	0/0:6,0:5:5.96:0,6,43
chr10	95285826	.	A	AAGAGAGAGAG	4204.75	PASS	AB=0.788;AC=33;AF=0.611;AN=54;BaseQRankSum=-2.465;DP=483;FS=6.792;HRun=0;HaplotypeScore=159.5609;InbreedingCoeff=0.3917;MQ=39.30;MQ0=28;MQRankSum=-1.498;QD=12.66;ReadPosRankSum=-2.378;VQSLOD=1.9272;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:34.26:0,34,904	1/1:8,0:7:6.01:100,6,0	0/0:9,0:2:2.99:0,3,24	./.	1/1:12,0:12:0.16:19,0,0	0/0:14,0:21:5.96:0,6,14	1/1:8,5:20:12.04:467,12,0	0/1:26,0:26:26.17:26,0,157	1/1:28,0:28:7.49:359,7,0	1/1:5,3:11:18.04:581,18,0	0/0:11,0:14:2.39:0,2,5	1/1:8,0:16:3.01:34,3,0	1/1:6,0:12:6.02:84,6,0	1/1:16,0:15:7.77:151,8,0	1/1:8,0:14:7.38:167,7,0	1/1:10,0:14:6.02:190,6,0	0/0:22,0:22:23.72:0,24,622	0/0:12,0:11:12.04:0,12,295	1/1:14,0:19:19.87:415,20,0	1/1:18,0:17:4.25:99,4,0	0/0:7,0:10:0.47:0,0,1	1/1:15,3:18:1.05:53,1,0	0/0:12,0:12:1:0,1,3	0/1:15,0:24:63.01:63,0,63	1/1:19,0:19:7.39:298,7,0	0/1:13,6:27:27.88:949,0,28	1/1:15,3:22:6.32:149,6,0	0/0:5,0:7:5.96:0,6,49
chr10	95286926	.	A	AT	2934.47	PASS	AB=0.848;AC=15;AF=0.268;AN=56;BaseQRankSum=-8.351;DP=621;FS=1.711;HRun=12;HaplotypeScore=70.6650;InbreedingCoeff=0.7302;MQ=71.73;MQ0=1;MQRankSum=0.868;QD=12.59;ReadPosRankSum=-2.568;VQSLOD=3.0635;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:86.37:0,86,628	0/0:15,0:15:35.76:0,36,263	0/1:13,0:13:11.53:12,0,46	0/0:10,0:10:9.92:0,10,54	0/0:24,1:28:26.49:0,26,349	0/0:18,0:18:49.22:0,49,353	0/0:24,0:24:53.62:0,54,394	0/0:24,0:24:53.57:0,54,388	0/1:28,2:29:7.74:8,0,277	1/1:8,19:27:35.15:495,35,0	1/1:7,33:40:48.67:745,49,0	0/0:23,0:23:59.61:0,60,434	0/0:19,0:19:35.73:0,36,263	0/0:13,0:14:36.84:0,37,249	0/0:20,0:25:51.91:0,52,336	0/0:10,0:11:25.90:0,26,181	0/0:19,0:19:38.71:0,39,284	0/0:20,0:21:28.52:0,29,313	1/1:5,11:16:27.01:255,27,0	1/1:11,17:29:19.23:354,19,0	1/1:4,5:14:23.50:178,23,0	0/0:28,0:28:65.58:0,66,481	0/0:16,1:17:9.57:0,10,233	0/0:22,0:22:53.67:0,54,394	0/0:23,0:23:50.65:0,51,372	0/1:12,21:34:12.86:490,0,13	1/1:4,25:28:44:591,44,0	0/0:9,0:9:20.84:0,21,153
chr10	95287287	.	C	CA	1025.20	PASS	AB=0.801;AC=17;AF=0.304;AN=56;BaseQRankSum=-3.915;DP=617;FS=6.115;HRun=14;HaplotypeScore=85.7458;InbreedingCoeff=0.2839;MQ=73.95;MQ0=2;MQRankSum=0.564;QD=3.76;ReadPosRankSum=-0.109;VQSLOD=1.1315;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:46.05:0,46,294	0/1:11,1:13:3.69:4,0,98	0/0:28,0:22:18.96:0,19,95	0/0:17,0:11:5.11:0,5,29	0/0:20,0:22:31.42:0,31,198	0/1:10,11:21:23.23:180,0,23	1/1:2,16:18:23.98:207,24,0	0/0:21,0:24:26.64:0,27,154	0/0:18,0:21:23.65:0,24,144	0/0:20,0:21:22.58:0,23,140	0/0:21,0:22:16.64:0,17,200	1/1:16,12:28:9.84:74,10,0	1/1:6,4:20:11.83:91,12,0	0/1:4,8:12:13.27:20,0,13	0/1:13,1:17:1.77:2,0,101	0/1:19,1:23:0.55:1,0,117	0/1:23,3:29:44.47:44,0,223	0/0:22,0:24:48.17:0,48,299	0/1:13,1:16:10.89:11,0,162	0/0:27,1:31:17.70:0,18,215	0/0:15,0:16:19.53:0,20,121	0/1:10,12:23:18.50:109,0,18	0/1:9,17:27:41.43:196,0,41	1/1:5,19:25:26.52:258,27,0	0/0:23,0:26:36.34:0,36,223	0/0:20,0:20:23.30:0,23,153	0/0:29,0:30:22.26:0,22,140	0/0:7,0:9:19.19:0,19,111
chr10	95288933	.	AT	A	10058.89	PASS	AB=1.000;AC=55;AF=0.982;AN=56;BaseQRankSum=2.237;DP=666;FS=0.932;HRun=1;HaplotypeScore=125.7134;InbreedingCoeff=-0.0191;MQ=86.24;MQ0=0;MQRankSum=-3.644;QD=15.10;ReadPosRankSum=6.652;VQSLOD=4.7052;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:91.24:578,91,0	1/1:11,0:11:23.40:136,23,0	1/1:23,0:23:18.15:259,18,0	0/1:20,0:20:99:148,0,132	1/1:23,0:23:61.67:387,62,0	1/1:29,0:29:42.96:356,43,0	1/1:25,0:25:67.31:393,67,0	1/1:32,0:32:62.20:432,62,0	1/1:27,0:27:72.02:420,72,0	1/1:1,31:32:73.66:533,74,0	1/1:18,0:18:52.69:308,53,0	1/1:28,0:28:72.95:440,73,0	1/1:21,0:21:58.46:341,58,0	1/1:24,0:24:65.03:404,65,0	1/1:25,0:25:70.19:407,70,0	1/1:31,0:31:84.81:500,85,0	1/1:27,0:27:70.55:430,71,0	1/1:16,0:16:23.11:228,23,0	1/1:16,0:16:46.29:255,46,0	1/1:33,0:33:71.64:522,72,0	1/1:42,0:42:95.95:588,96,0	1/1:24,0:24:16.57:313,17,0	1/1:21,0:21:52.49:330,52,0	1/1:15,0:15:38.14:228,38,0	1/1:24,0:24:67.21:388,67,0	1/1:16,0:16:46:240,46,0	1/1:19,0:19:49.71:298,50,0	1/1:11,0:11:32.36:201,32,0
chr10	95290692	.	G	GTT	4929.15	PASS	AB=0.744;AC=7;AF=0.135;AN=52;BaseQRankSum=9.209;DP=869;FS=106.294;HRun=0;HaplotypeScore=88.2596;InbreedingCoeff=-0.1689;MQ=35.08;MQ0=187;MQRankSum=-11.601;QD=14.89;ReadPosRankSum=3.897;VQSLOD=1.2080;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:15:12.01:0,12,170	0/0:8,0:4:12.04:0,12,196	./.	./.	0/0:24,0:22:46.40:0,46,735	0/0:29,0:18:30.10:0,30,489	0/0:24,0:9:11.92:0,12,123	0/0:22,0:6:18.06:0,18,294	0/0:23,0:11:27.09:0,27,440	0/1:21,18:33:99:938,0,636	0/1:19,19:34:99:954,0,427	0/0:39,0:23:39.13:0,39,635	0/0:36,0:19:32.66:0,33,537	0/0:42,0:18:32.85:0,33,534	0/0:22,0:13:27.09:0,27,440	0/0:42,0:20:54.18:0,54,880	0/0:16,0:7:12.04:0,12,190	0/0:13,0:6:9.03:0,9,141	0/1:17,6:12:99:207,0,355	0/1:28,23:44:99:1130,0,760	0/1:53,7:35:9.67:10,0,687	0/0:17,0:14:15.04:0,15,221	0/0:24,0:19:42.14:0,42,684	0/0:25,0:14:21.07:0,21,342	0/0:16,0:12:26.86:0,27,438	0/1:39,21:45:99:842,0,1225	0/1:39,21:45:99:848,0,1094	0/0:5,0:3:6.02:0,6,98
chr10	95290735	.	G	GTT	5270.09	PASS	AB=0.749;AC=13;AF=0.325;AN=40;BaseQRankSum=2.475;DP=761;FS=2.490;HRun=0;HaplotypeScore=47.2042;InbreedingCoeff=0.4859;MQ=23.69;MQ0=318;MQRankSum=-0.095;QD=22.62;ReadPosRankSum=0.188;VQSLOD=4.4921;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:1:3.01:0,3,48	./.	./.	0/0:15,0:3:3.01:0,3,48	./.	./.	0/0:42,0:10:30.10:0,30,486	0/0:25,0:4:6.02:0,6,98	0/1:8,17:15:3.80:789,0,4	1/1:5,20:18:39.13:790,39,0	0/0:45,0:13:3.01:0,3,47	0/0:43,0:9:5.57:0,6,97	0/0:48,0:6:2.77:0,3,49	./.	0/0:51,0:10:6.02:0,6,98	./.	0/0:14,0:3:6.02:0,6,98	1/1:12,11:6:18.06:352,18,0	1/1:6,22:24:60.15:1139,60,0	1/1:22,19:15:8.96:161,9,0	0/0:13,0:7:3.01:0,3,47	0/0:25,0:10:12.04:0,12,194	./.	0/1:11,0:4:0:0,0,0	0/1:15,20:24:99:1082,0,123	1/1:18,21:24:50.91:957,51,0	0/0:6,0:2:6.02:0,6,98
chr10	95290778	.	G	GTT	863.65	PASS	AB=0.678;AC=8;AF=0.444;AN=18;BaseQRankSum=1.967;DP=668;FS=0.000;HRun=0;HaplotypeScore=17.9171;MQ=9.02;MQ0=427;MQRankSum=2.009;QD=12.52;ReadPosRankSum=0.753;VQSLOD=2.3635;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	0/0:14,0:7:18.06:0,18,294	0/0:34,0:3:3.01:0,3,49	1/1:8,2:2:6.02:121,6,0	./.	./.	./.	./.	./.	./.	./.	0/0:16,0:1:1.25:0,1,3	1/1:7,4:3:9.03:183,9,0	0/1:5,6:5:51.79:52,0,87	0/0:20,0:1:3.01:0,3,49	./.	./.	./.	./.	1/1:9,6:7:21.07:426,21,0	0/1:13,9:10:79.31:179,0,79	./.
chr10	95290821	.	G	GTT	662.28	PASS	AC=8;AF=1.00;AN=8;DP=618;FS=0.000;HRun=0;HaplotypeScore=9.6665;MQ=6.20;MQ0=459;QD=11.83;VQSLOD=2.3842;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:6,11:2:6.02:122,6,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:5,5:1:3.01:61,3,0	./.	./.	./.	./.	./.	1/1:3,8:2:6.02:122,6,0	1/1:6,12:8:21.07:426,21,0	./.
chr10	95291820	.	G	GTT	107	PASS	AC=2;AF=0.111;AN=18;BaseQRankSum=2.296;DP=449;FS=0.000;HRun=0;HaplotypeScore=24.7123;MQ=26.96;MQ0=340;MQRankSum=-2.821;QD=17.83;ReadPosRankSum=1.083;VQSLOD=3.0497;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:22:63.22:0,63,1027	./.	0/0:1,0:1:3.01:0,3,48	0/0:2,0:2:6.02:0,6,93	./.	./.	./.	./.	./.	0/0:4,0:1:0:0,0,0	./.	./.	./.	./.	./.	./.	0/0:37,0:23:66.23:0,66,1068	0/0:20,0:12:33.11:0,33,511	0/0:7,0:3:3.01:0,3,49	./.	0/0:9,1:4:3.01:0,3,49	./.	./.	./.	./.	1/1:3,3:5:9.03:183,9,0	./.	./.
chr10	95292125	.	G	GTT	349.07	PASS	AB=0.658;AC=3;AF=0.100;AN=30;BaseQRankSum=3.191;DP=529;FS=4.844;HRun=0;HaplotypeScore=20.6160;InbreedingCoeff=-0.1881;MQ=16.23;MQ0=355;MQRankSum=-3.055;QD=20.53;ReadPosRankSum=2.108;VQSLOD=2.9722;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:20:15.05:0,15,244	0/0:8,0:6:6.02:0,6,98	./.	./.	0/0:12,0:11:12.04:0,12,195	./.	./.	0/0:58,0:2:5.99:0,6,70	0/0:46,0:13:12.04:0,12,195	0/1:1,1:2:42.86:55,0,43	0/0:1,0:1:3.01:0,3,49	./.	./.	./.	0/0:98,0:33:29.97:0,30,488	0/0:58,0:14:3.01:0,3,49	0/0:25,0:15:9.03:0,9,147	0/0:26,0:8:15.05:0,15,244	./.	0/1:7,5:11:99:271,0,260	./.	./.	./.	./.	0/0:28,0:14:3.01:0,3,49	0/1:1,2:3:39.88:113,0,40	./.	0/0:14,0:7:12.04:0,12,196
chr10	95292168	.	G	GTT	263.66	PASS	AC=4;AF=0.154;AN=26;BaseQRankSum=3.646;DP=452;FS=7.659;HRun=0;HaplotypeScore=14.1456;InbreedingCoeff=0.6734;MQ=19.77;MQ0=194;MQRankSum=-3.458;QD=32.96;ReadPosRankSum=-4.129;VQSLOD=3.1954;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:32:15.05:0,15,244	0/0:12,0:9:9.03:0,9,146	./.	./.	0/0:18,0:15:12.04:0,12,195	./.	./.	0/0:29,0:4:12.04:0,12,196	0/0:42,0:20:12.04:0,12,195	./.	./.	./.	./.	./.	0/0:55,0:39:30.10:0,30,488	0/0:43,0:22:3.01:0,3,49	0/0:28,0:21:9.03:0,9,147	0/0:25,0:11:15.05:0,15,245	./.	1/1:2,4:5:15.05:259,15,0	./.	./.	./.	./.	0/0:25,0:19:6.02:0,6,98	1/1:1,1:2:6.02:102,6,0	./.	0/0:16,0:13:12.04:0,12,196
chr10	95292215	.	G	GTT	1011.41	PASS	AB=0.595;AC=6;AF=0.429;AN=14;BaseQRankSum=0.645;DP=480;FS=6.990;HRun=0;HaplotypeScore=20.2079;MQ=13.89;MQ0=315;MQRankSum=-2.819;QD=42.14;ReadPosRankSum=-1.053;VQSLOD=4.0161;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:11,0:5:3.01:0,3,49	./.	./.	./.	./.	./.	./.	0/0:42,0:12:3.01:0,3,49	1/1:1,3:4:12.04:217,12,0	0/1:2,3:5:32.10:226,0,32	./.	./.	./.	./.	./.	./.	./.	./.	0/1:3,10:12:14.61:575,0,15	./.	./.	./.	./.	0/0:20,0:11:3.01:0,3,49	1/1:1,1:2:5.98:80,6,0	./.	./.
chr10	95292258	.	G	GTT	2716.88	PASS	AB=0.593;AC=6;AF=0.500;AN=12;BaseQRankSum=2.443;DP=525;FS=19.956;HRun=0;HaplotypeScore=47.0116;MQ=10.37;MQ0=424;MQRankSum=2.956;QD=46.05;ReadPosRankSum=1.417;VQSLOD=2.6604;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	./.	0/0:37,0:1:3.01:0,3,49	0/1:5,11:15:52.69:745,0,53	1/1:1,15:16:42.06:807,42,0	./.	./.	./.	./.	./.	./.	0/0:25,0:2:3.01:0,3,49	./.	1/1:1,19:18:5.36:984,5,0	./.	./.	./.	./.	./.	0/1:2,4:6:30.84:265,0,31	./.	./.
chr10	95292301	.	G	GTT	2111.91	PASS	AB=0.693;AC=8;AF=0.667;AN=12;BaseQRankSum=3.411;DP=563;FS=0.000;HRun=0;HaplotypeScore=54.9786;MQ=9.27;MQ0=483;MQRankSum=3.857;QD=33.52;ReadPosRankSum=-0.484;VQSLOD=5.0631;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/1:9,12:19:99:735,0,233	1/1:2,11:12:24.08:486,24,0	./.	./.	./.	./.	./.	./.	0/0:20,0:1:3.01:0,3,49	./.	1/1:1,11:11:30.10:608,30,0	./.	./.	./.	./.	./.	0/1:6,3:7:99:164,0,129	1/1:5,3:6:12.01:204,12,0	./.
chr10	95292344	.	G	GTT	574.76	PASS	AB=0.763;AC=5;AF=0.50;AN=10;BaseQRankSum=1.713;DP=655;FS=0.000;HRun=0;HaplotypeScore=17.8295;MQ=9.53;MQ0=490;MQRankSum=1.050;QD=7.18;ReadPosRankSum=0.497;VQSLOD=2.5489;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/1:13,6:12:99:147,0,404	0/1:8,2:7:39.81:72,0,40	./.	./.	./.	./.	./.	./.	./.	./.	0/1:9,8:5:51.76:52,0,88	./.	./.	./.	./.	./.	0/1:9,2:4:48.82:49,0,135	0/1:13,9:19:99:332,0,211	./.
chr10	95298262	.	TAC	T	2129.30	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=2.768;DP=409;FS=3.016;HRun=0;HaplotypeScore=63.7334;InbreedingCoeff=0.7004;MQ=67.96;MQ0=5;MQRankSum=0.873;QD=9.02;ReadPosRankSum=0.003;VQSLOD=3.2582;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:47.25:0,47,696	1/1:1,6:7:9.03:105,9,0	0/0:26,0:15:6.01:0,6,83	0/0:24,0:10:8.62:0,9,97	1/1:5,10:15:29.62:276,30,0	1/1:4,17:21:32.93:362,33,0	1/1:6,9:16:9.03:105,9,0	1/1:19,8:27:21.06:241,21,0	1/1:2,9:11:12.04:139,12,0	0/0:13,0:13:33.11:0,33,492	0/0:16,0:16:20.94:0,21,319	1/1:3,4:7:9.03:104,9,0	1/1:4,5:9:9.03:105,9,0	1/1:5,9:14:9.03:104,9,0	1/1:2,6:8:12.04:139,12,0	1/1:1,4:5:6.02:70,6,0	0/0:23,0:23:47.97:0,48,702	0/0:18,0:18:17.51:0,18,493	0/1:19,0:19:6.76:7,0,397	0/0:16,0:16:33.03:0,33,457	0/0:12,0:12:15.04:0,15,206	1/1:2,4:6:6.02:70,6,0	1/1:5,6:11:5.93:70,6,0	1/1:5,4:8:3.01:35,3,0	1/1:5,10:15:21.06:244,21,0	0/0:4,0:4:6.02:0,6,93	0/1:20,0:20:18.43:18,0,418	1/1:7,8:15:12.04:139,12,0
chr10	95298290	.	A	AAT	1502.42	PASS	AB=0.691;AC=12;AF=0.222;AN=54;BaseQRankSum=-5.899;DP=357;FS=14.163;HRun=0;HaplotypeScore=58.6589;InbreedingCoeff=0.6350;MQ=56.67;MQ0=5;MQRankSum=1.920;QD=16.88;ReadPosRankSum=1.074;VQSLOD=2.4349;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:56.80:0,57,657	0/0:7,0:7:12.04:0,12,149	0/0:10,0:4:3.01:0,3,31	./.	0/0:19,0:18:33.10:0,33,403	0/0:25,0:26:54:0,54,633	0/0:10,0:10:12.04:0,12,149	0/0:34,0:33:76.59:0,77,936	0/0:8,0:8:12.04:0,12,149	1/1:3,12:15:33.56:466,34,0	0/1:5,7:12:7.18:156,0,7	0/0:7,0:7:18:0,18,207	0/0:5,0:5:15.05:0,15,185	0/0:9,0:9:9.01:0,9,92	0/0:6,0:6:12.04:0,12,150	0/0:6,0:6:12.03:0,12,138	0/0:21,0:21:51.16:0,51,629	0/0:18,0:18:48.11:0,48,569	1/1:7,9:18:35.75:454,36,0	0/1:10,5:15:28.51:79,0,29	1/1:4,0:4:3.01:46,3,0	0/0:4,0:4:9:0,9,112	0/0:6,0:6:5.93:0,6,75	0/0:6,0:6:6.02:0,6,75	0/0:15,0:15:36.10:0,36,435	1/1:0,3:3:9.03:146,9,0	1/1:6,16:22:20.99:321,21,0	0/0:14,0:11:18.04:0,18,210
chr10	95298460	.	TACAATTAAAA	T	5896.48	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.221;DP=423;FS=1.081;HRun=0;HaplotypeScore=131.5960;InbreedingCoeff=0.9854;MQ=76.57;MQ0=0;MQRankSum=-9.014;QD=70.20;ReadPosRankSum=0.812;VQSLOD=4.9466;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.26:0,78,3818	0/0:8,0:8:24.08:0,24,1254	0/0:13,0:13:33.06:0,33,1361	0/0:10,0:9:21.07:0,21,796	0/0:26,0:24:66.19:0,66,2968	0/0:17,0:17:48.14:0,48,2069	0/0:12,0:12:30.09:0,30,1306	0/0:29,0:29:81.27:0,81,3641	0/0:13,0:13:39.13:0,39,1885	1/1:2,7:9:21.07:652,21,0	1/1:1,7:8:21.07:619,21,0	0/0:17,0:17:48.16:0,48,2345	0/0:17,0:17:42.14:0,42,2056	0/0:12,0:12:33.10:0,33,1454	0/0:11,0:11:33.11:0,33,1415	0/0:18,0:18:54.18:0,54,2568	0/0:27,0:26:75.23:0,75,3633	0/0:14,0:14:33.11:0,33,1487	1/1:2,14:16:45.05:1008,45,0	1/1:0,10:10:30.10:970,30,0	1/1:1,8:9:9.03:212,9,0	0/0:8,0:8:24.02:0,24,941	0/0:10,0:10:30.10:0,30,1569	0/0:8,0:8:24.08:0,24,1165	0/0:26,0:24:66.21:0,66,2804	1/1:2,11:13:33.10:980,33,0	1/1:0,19:19:45.03:1455,45,0	0/0:15,0:15:33.11:0,33,1728
chr10	95298751	.	C	CGT	570.85	PASS	AB=0.965;AC=34;AF=0.739;AN=46;BaseQRankSum=3.748;DP=658;FS=5.567;HRun=0;HaplotypeScore=139.7937;InbreedingCoeff=0.1655;MQ=60.74;MQ0=11;MQRankSum=-1.534;QD=1.29;ReadPosRankSum=-0.565;VQSLOD=2.1883;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:2.78:0,3,24	./.	./.	./.	./.	1/1:25,0:24:7.56:69,8,0	0/0:26,0:25:1.93:0,2,9	1/1:17,0:17:0.89:2,1,0	1/1:21,0:21:2.37:9,2,0	1/1:21,0:21:12.27:98,12,0	1/1:5,1:6:3.01:44,3,0	1/1:28,0:28:2.94:43,3,0	0/1:14,1:14:25.45:38,0,25	0/1:24,2:26:17.34:38,0,17	1/1:38,1:39:5.22:33,5,0	./.	0/0:31,0:30:20.53:0,21,210	0/1:28,0:29:3.69:4,0,112	1/1:22,0:22:6.41:41,6,0	1/1:12,0:12:3.01:42,3,0	0/1:38,0:37:0.33:0,0,1	1/1:22,1:22:3.01:42,3,0	0/1:17,0:17:0:0,0,0	0/1:23,2:25:23.30:78,0,23	1/1:23,0:21:3.01:41,3,0	1/1:23,0:23:1.25:3,1,0	1/1:23,0:23:10.54:54,11,0	1/1:10,0:8:3.31:15,3,0
chr10	95298803	.	TGACAGACAGACAGACAGACA	T	3474.03	PASS	AB=0.800;AC=11;AF=0.275;AN=40;BaseQRankSum=7.002;DP=584;FS=24.992;HRun=0;HaplotypeScore=202.8586;InbreedingCoeff=0.7473;MQ=36.92;MQ0=63;MQRankSum=-4.289;QD=38.18;ReadPosRankSum=0.680;VQSLOD=1.4624;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:69.24:0,69,5742	./.	./.	0/0:35,0:2:6.02:0,6,216	1/1:9,8:12:3.01:110,3,0	0/0:18,0:23:5.51:0,6,274	0/0:26,0:24:10.29:0,10,472	0/0:15,0:15:15.05:0,15,501	0/1:9,3:12:0:0,0,0	1/1:7,10:17:20.56:959,21,0	./.	0/0:20,0:21:5.43:0,5,477	0/0:17,0:16:19.38:0,19,832	0/0:23,0:21:10.86:0,11,458	./.	./.	0/0:36,0:32:68.40:0,68,5674	0/0:30,0:28:63.04:0,63,4580	1/1:3,6:9:17.95:544,18,0	0/0:3,6:7:0.94:0,1,2	./.	./.	0/0:25,0:23:8.75:0,9,285	0/0:25,0:23:8.29:0,8,329	./.	1/1:6,10:16:25.66:1204,26,0	1/1:10,10:18:14.94:658,15,0	0/0:3,0:7:15.05:0,15,449
chr10	95299282	.	T	TAACC	12732.85	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-8.923;DP=648;FS=2.850;HRun=0;HaplotypeScore=101.5347;InbreedingCoeff=0.9996;MQ=86.24;MQ0=0;MQRankSum=-9.913;QD=71.94;ReadPosRankSum=-0.699;VQSLOD=6.8784;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,2097	0/0:16,0:16:45.15:0,45,899	0/0:21,0:22:60.20:0,60,1096	0/0:27,0:27:72.19:0,72,1256	0/0:24,0:24:69.21:0,69,1307	0/0:18,0:18:54.19:0,54,1079	0/0:22,0:22:66.23:0,66,1318	0/0:31,0:31:84.29:0,84,1660	0/0:15,0:15:45.15:0,45,883	1/1:6,13:20:60.21:1635,60,0	1/1:4,16:21:57.20:1507,57,0	0/0:23,0:23:69.22:0,69,1330	0/0:20,0:20:60.19:0,60,1157	0/0:24,0:24:69.19:0,69,1336	0/0:24,0:24:72.23:0,72,1403	0/0:28,0:28:84.29:0,84,1659	0/0:30,0:30:90.29:0,90,1761	0/0:12,0:12:33.11:0,33,638	1/1:8,13:25:63.19:1605,63,0	1/1:5,23:29:78.27:2061,78,0	1/1:2,10:13:27.09:754,27,0	0/0:19,0:19:57.20:0,57,1131	0/0:26,0:26:78.27:0,78,1554	0/0:22,0:22:66.23:0,66,1318	0/0:23,0:23:66.23:0,66,1318	1/1:1,20:22:63.18:1695,63,0	1/1:5,37:47:99:3474,129,0	0/0:10,0:10:27.09:0,27,527
chr10	95300314	.	C	CA	1348.44	PASS	AB=0.864;AC=20;AF=0.357;AN=56;BaseQRankSum=-2.199;DP=474;FS=6.586;HRun=14;HaplotypeScore=63.0009;InbreedingCoeff=0.4760;MQ=63.55;MQ0=11;MQRankSum=0.778;QD=5.99;ReadPosRankSum=-2.820;VQSLOD=1.5830;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:30:54.22:0,54,337	0/0:5,0:5:8.78:0,9,58	0/1:13,0:10:12.93:13,0,50	0/1:12,1:9:10.21:23,0,10	0/1:15,1:16:0.78:1,0,115	0/0:23,1:25:10.52:0,11,177	0/0:12,1:15:1.37:0,1,120	1/1:18,2:30:35.51:228,36,0	0/0:18,0:19:36.54:0,37,216	1/1:8,11:19:13:204,13,0	1/1:6,8:12:20.72:154,21,0	0/0:10,0:9:11.73:0,12,77	0/0:14,0:14:23.33:0,23,147	0/0:11,0:12:19.49:0,19,118	0/0:12,0:16:24.64:0,25,145	0/0:17,0:19:33.51:0,34,204	0/0:22,0:22:43.33:0,43,275	0/0:14,0:14:29.51:0,30,192	0/1:12,6:18:17.35:132,0,17	1/1:10,9:20:9.93:132,10,0	1/1:0,7:7:18.88:160,19,0	0/1:8,1:9:12.75:13,0,49	0/0:10,0:12:9.92:0,10,50	0/0:12,0:13:21.46:0,21,127	0/0:19,0:22:38.43:0,38,225	1/1:11,17:26:6.12:316,6,0	0/1:9,12:22:21.79:130,0,22	1/1:5,0:4:5.68:28,6,0
chr10	95302769	.	G	GT	1903.19	PASS	AB=0.957;AC=29;AF=0.518;AN=56;BaseQRankSum=1.854;DP=516;FS=2.133;HRun=11;HaplotypeScore=125.6919;InbreedingCoeff=0.1865;MQ=59.51;MQ0=7;MQRankSum=-1.827;QD=5.35;ReadPosRankSum=-2.678;VQSLOD=1.4694;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:13.47:0,13,274	0/1:13,0:12:1.76:2,0,2	0/1:20,0:15:25.23:25,0,39	0/1:27,0:16:67.50:68,0,70	0/0:30,0:27:5.52:0,6,33	0/1:20,1:20:47.73:95,0,48	0/0:15,0:15:3.05:0,3,143	1/1:32,1:32:21.72:110,22,0	1/1:12,0:12:1.41:4,1,0	1/1:11,4:15:11.95:211,12,0	1/1:14,5:19:42.50:302,42,0	0/0:17,0:15:4.50:0,4,59	0/1:11,0:11:1.14:1,0,76	0/1:21,1:22:99:103,0,125	0/1:15,0:14:0.97:1,0,13	0/0:15,0:14:14.46:0,14,61	0/0:22,0:24:45.41:0,45,314	0/0:17,0:17:36.14:0,36,262	1/1:12,5:17:31.66:257,32,0	1/1:18,5:24:24.31:288,24,0	1/1:7,1:9:8.59:72,9,0	0/1:10,0:10:26.52:28,0,27	0/1:17,1:18:39.94:53,0,40	0/0:18,0:17:10.04:0,10,181	1/1:20,0:18:0.22:63,0,0	0/1:11,3:14:16.20:159,0,16	1/1:12,5:16:10.76:218,11,0	0/1:11,0:11:6.26:18,0,6
chr10	95302776	.	T	TTTTTG	4468.61	PASS	AB=0.994;AC=20;AF=0.370;AN=54;BaseQRankSum=-10.268;DP=529;FS=1.060;HRun=0;HaplotypeScore=159.1012;InbreedingCoeff=0.7556;MQ=55.10;MQ0=11;MQRankSum=0.184;QD=19.51;ReadPosRankSum=2.200;VQSLOD=4.1378;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:33.46:0,33,435	0/0:13,0:12:21.19:0,21,182	0/1:21,0:12:0.02:0,0,0	0/1:42,0:16:2.87:3,0,42	0/0:33,0:30:31.19:0,31,297	1/1:17,3:20:45.15:964,45,0	1/1:16,0:17:24.06:427,24,0	0/0:32,0:31:16.81:0,17,104	./.	0/0:20,0:20:27.61:0,28,190	0/0:22,0:21:35.19:0,35,269	1/1:17,0:15:32.94:485,33,0	1/1:12,0:11:9.63:302,10,0	1/1:19,0:20:36.04:682,36,0	0/0:14,0:13:13.73:0,14,78	0/0:15,0:14:32.43:0,32,244	0/0:21,0:21:27.94:0,28,353	0/0:18,0:17:27.07:0,27,398	0/0:14,0:14:9.02:0,9,100	0/0:23,0:23:37.05:0,37,303	0/0:9,0:9:8.73:0,9,49	1/1:10,1:10:25.33:533,25,0	1/1:16,1:16:32.72:649,33,0	1/1:17,2:18:24.06:409,24,0	0/1:21,0:18:10.48:10,0,114	0/0:15,0:15:25.79:0,26,208	0/0:18,0:17:22.23:0,22,142	0/1:10,0:9:3.83:4,0,41
chr10	95302777	.	TTTTG	T	3440.33	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=-3.114;DP=533;FS=1.368;HRun=0;HaplotypeScore=143.3899;InbreedingCoeff=0.3726;MQ=53.14;MQ0=12;MQRankSum=-1.447;QD=10.68;ReadPosRankSum=-2.960;VQSLOD=2.4121;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:18.97:0,19,672	0/1:13,0:12:13.97:14,0,40	0/0:21,0:11:4.59:0,5,51	0/1:43,0:15:25.58:26,0,178	0/1:33,0:30:47.06:72,0,47	0/0:22,0:21:57.08:0,57,900	0/0:18,0:18:44.09:0,44,540	0/1:32,0:31:37.28:95,0,37	1/1:10,0:10:1.41:4,1,0	1/1:16,4:20:30.31:547,30,0	1/1:15,7:21:36.33:632,36,0	0/0:18,0:16:35.66:0,36,484	0/0:12,0:11:29.90:0,30,443	0/0:20,0:20:53.46:0,53,701	0/1:14,0:13:17.71:18,0,21	0/0:17,0:16:0.39:0,0,112	0/0:21,0:21:48.66:0,49,662	0/1:18,0:17:2.39:2,0,454	1/1:12,2:14:34.64:363,35,0	1/1:16,7:23:55.98:652,56,0	1/1:8,1:9:11.51:98,12,0	0/0:11,0:10:30.03:0,30,484	0/1:16,0:15:4.34:4,0,505	0/0:18,0:17:45.03:0,45,561	0/1:22,0:19:20.46:51,0,20	1/1:10,5:15:36.80:425,37,0	1/1:16,2:17:20.25:436,20,0	0/0:10,0:9:10.54:0,11,92
chr10	95302778	.	TTTG	T	2426.97	PASS	AB=0.958;AC=27;AF=0.482;AN=56;BaseQRankSum=-0.244;DP=532;FS=4.299;HRun=0;HaplotypeScore=137.5068;InbreedingCoeff=0.6555;MQ=52.86;MQ0=13;MQRankSum=-2.046;QD=8.52;ReadPosRankSum=-3.673;VQSLOD=2.5112;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:41.60:0,42,600	1/1:13,0:12:9.24:34,9,0	0/0:24,0:11:17.68:0,18,126	0/0:45,0:15:20.14:0,20,204	1/1:33,0:30:7.04:120,7,0	0/0:23,0:22:60.07:0,60,800	0/0:17,0:17:34.33:0,34,542	0/1:28,4:31:5.31:312,0,5	1/1:10,0:10:5.76:19,6,0	1/1:19,1:20:18.95:329,19,0	1/1:22,0:21:50.60:367,51,0	0/0:17,0:15:35.69:0,36,441	0/0:12,0:11:29.92:0,30,397	0/0:20,0:20:53.53:0,54,669	0/1:14,0:13:3.66:26,0,4	0/1:17,0:16:36.32:37,0,36	0/0:21,0:21:52.05:0,52,632	0/1:17,0:16:3.68:4,0,430	1/1:13,0:13:29.01:186,29,0	1/1:22,1:23:52.36:407,52,0	1/1:8,1:9:14.97:135,15,0	0/0:11,0:10:30.04:0,30,419	0/0:16,0:15:17.38:0,17,463	0/0:18,0:17:44.13:0,44,558	1/1:21,0:18:16.74:116,17,0	1/1:15,0:15:37.23:261,37,0	1/1:16,0:16:12.71:228,13,0	0/1:8,1:8:33.57:56,0,34
chr10	95302779	.	TTG	T	2590.90	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=1.080;DP=533;FS=0.393;HRun=0;HaplotypeScore=128.8497;InbreedingCoeff=0.7927;MQ=52.24;MQ0=14;MQRankSum=-3.209;QD=9.19;ReadPosRankSum=-3.841;VQSLOD=2.6884;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:39.73:0,40,563	1/1:12,1:12:24.08:140,24,0	0/0:26,0:10:17.54:0,18,138	0/0:47,0:15:21.68:0,22,173	1/1:29,2:28:47.20:318,47,0	0/0:23,0:22:60.05:0,60,639	0/0:16,1:17:6.76:0,7,466	1/1:30,0:29:25.97:296,26,0	1/1:9,1:10:11.60:85,12,0	1/1:20,0:20:15.30:310,15,0	1/1:22,0:21:42.23:276,42,0	0/0:17,0:15:35.64:0,36,392	0/0:12,0:11:29.85:0,30,308	0/0:20,0:20:45.30:0,45,521	1/1:14,0:13:9.08:139,9,0	1/1:17,0:16:1.30:109,1,0	0/0:21,0:21:52.92:0,53,585	0/1:17,0:16:14.58:15,0,383	1/1:13,0:13:23.08:127,23,0	1/1:24,0:24:44.56:296,45,0	1/1:9,0:9:13.56:81,14,0	0/0:11,0:10:29.87:0,30,329	0/0:16,0:15:23.16:0,23,377	0/0:18,0:17:44.32:0,44,522	1/1:20,1:18:28.68:194,29,0	1/1:15,0:15:31.73:185,32,0	1/1:17,0:16:8.47:176,8,0	0/1:9,0:8:10.22:62,0,10
chr10	95302780	.	TG	T	3482.67	PASS	AB=0.974;AC=28;AF=0.500;AN=56;BaseQRankSum=1.799;DP=531;FS=0.000;HRun=1;HaplotypeScore=118.7180;InbreedingCoeff=0.7643;MQ=52.18;MQ0=15;MQRankSum=-4.884;QD=12.48;ReadPosRankSum=-2.398;VQSLOD=1.4281;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:32.67:0,33,488	1/1:7,5:11:27.02:315,27,0	0/0:24,1:10:9.70:0,10,99	0/0:47,2:15:28.83:0,29,176	1/1:20,10:27:69.55:674,70,0	0/0:24,0:23:61.76:0,62,477	0/0:17,0:17:25.87:0,26,404	1/1:30,0:29:31:278,31,0	1/1:1,9:10:12.01:145,12,0	0/1:20,0:20:2.16:231,0,2	1/1:21,0:20:26.86:203,27,0	0/0:18,0:16:31.49:0,31,292	0/0:12,0:11:27.33:0,27,218	0/0:19,0:19:36.52:0,37,390	1/1:9,5:13:21.11:295,21,0	1/1:18,0:17:24.46:262,24,0	0/0:21,0:21:32.17:0,32,439	0/1:17,0:16:1.43:1,0,289	0/1:13,0:13:1.88:109,0,2	1/1:22,1:23:11.22:182,11,0	1/1:9,0:9:10.72:60,11,0	0/0:11,0:10:29.66:0,30,248	0/0:15,0:14:25.35:0,25,271	0/0:18,0:17:43.85:0,44,401	1/1:17,4:18:41.55:355,42,0	1/1:15,0:15:6.78:147,7,0	0/1:14,2:16:13.75:148,0,14	1/1:9,0:8:16.02:77,16,0
chr10	95302783	.	T	TG	579.72	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.073;DP=545;FS=11.666;HRun=0;HaplotypeScore=131.8344;InbreedingCoeff=0.8011;MQ=49.89;MQ0=16;MQRankSum=-2.529;QD=16.10;ReadPosRankSum=-1.064;VQSLOD=5.0769;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:54.10:0,54,692	0/0:13,0:11:26.98:0,27,238	0/0:27,0:9:20.13:0,20,178	0/0:57,0:16:30.99:0,31,280	0/0:32,0:29:67.42:0,67,491	0/0:23,0:22:62.01:0,62,682	0/0:17,0:17:47.58:0,48,567	1/1:14,12:25:3.24:535,3,0	0/0:9,0:9:11.95:0,12,99	0/0:20,0:20:52.61:0,53,407	0/0:21,0:20:34.40:0,34,247	0/0:20,0:18:45.05:0,45,520	0/0:11,0:10:28.60:0,29,328	0/0:19,0:19:40.96:0,41,558	0/0:14,0:13:26.79:0,27,217	0/0:19,0:18:41.75:0,42,332	0/0:22,0:21:54.13:0,54,712	0/0:17,0:16:21.85:0,22,523	0/0:14,0:14:31.78:0,32,286	0/0:22,0:23:58.20:0,58,455	0/0:9,0:9:17.65:0,18,126	0/0:11,0:10:29.98:0,30,330	0/0:15,0:14:35.87:0,36,401	0/0:18,0:17:45.05:0,45,544	0/0:22,0:19:38.91:0,39,299	0/0:16,0:16:37.17:0,37,284	0/0:18,0:17:30:0,30,248	1/1:7,3:8:5.11:141,5,0
chr10	95302788	.	T	TG	99.56	PASS	AB=0.813;AC=3;AF=0.054;AN=56;BaseQRankSum=1.474;DP=552;FS=0.000;HRun=0;HaplotypeScore=132.9882;InbreedingCoeff=0.4177;MQ=48.37;MQ0=17;MQRankSum=-3.749;QD=2.84;ReadPosRankSum=1.705;VQSLOD=2.9725;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:45.03:0,45,564	0/0:13,0:11:27.08:0,27,359	0/0:31,0:8:15.41:0,15,148	0/0:63,0:17:31.70:0,32,284	0/0:31,0:28:62.58:0,63,713	0/0:25,0:24:67.82:0,68,774	0/0:17,0:17:50.93:0,51,603	0/1:20,6:25:98.93:99,0,227	0/0:9,0:9:12.03:0,12,153	0/0:19,0:19:48.61:0,49,633	0/0:21,0:20:32.33:0,32,504	0/0:21,0:19:47.95:0,48,565	0/0:12,0:11:28.58:0,29,329	0/0:19,0:19:48.89:0,49,593	0/0:15,0:14:29.49:0,29,317	0/0:19,0:18:42.09:0,42,499	0/0:23,0:22:57.12:0,57,709	0/0:17,0:16:45.05:0,45,583	0/0:11,0:11:23.95:0,24,257	0/0:22,0:22:58.33:0,58,717	0/0:8,0:8:16.42:0,16,207	0/0:12,0:11:29.98:0,30,332	0/0:16,0:15:39.07:0,39,466	0/0:16,0:15:42.07:0,42,511	0/0:22,0:19:44.82:0,45,496	0/0:13,0:13:32.70:0,33,416	0/0:18,0:17:38.12:0,38,446	1/1:7,2:7:1.92:91,2,0
chr10	95302801	.	GT	G	1780.57	PASS	AB=0.777;AC=13;AF=0.241;AN=54;BaseQRankSum=1.897;DP=559;FS=3.606;HRun=7;HaplotypeScore=124.3073;InbreedingCoeff=0.4441;MQ=40.76;MQ0=23;MQRankSum=-4.558;QD=11.64;ReadPosRankSum=-1.424;VQSLOD=2.0279;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:37.11:0,37,372	0/1:12,0:10:1.59:2,0,113	0/0:35,0:3:3:0,3,29	0/0:61,0:12:13.01:0,13,117	0/1:36,0:33:14.60:15,0,365	0/0:26,0:26:63.30:0,63,620	0/0:16,0:16:23.63:0,24,255	0/0:31,0:30:4.02:0,4,364	./.	1/1:2,15:17:42.53:417,43,0	1/1:4,12:15:32.88:301,33,0	0/0:22,0:21:23.56:0,24,397	0/0:13,0:12:6.48:0,6,135	0/0:22,0:22:28.21:0,28,267	0/0:15,0:14:7.27:0,7,76	0/0:23,0:21:2.63:0,3,218	0/0:18,0:18:21.45:0,21,317	0/0:15,0:14:29.98:0,30,326	1/1:6,10:14:27.01:275,27,0	1/1:3,16:19:49.72:452,50,0	0/1:3,3:6:25.56:46,0,26	0/0:13,0:12:17.27:0,17,142	0/0:19,0:18:14.74:0,15,207	0/0:16,0:14:13.15:0,13,119	0/0:23,0:20:27.01:0,27,285	0/1:4,9:13:42.68:208,0,43	0/1:7,9:16:5.12:233,0,5	0/0:9,0:7:12.70:0,13,87
chr10	95302808	.	TC	T	1756.81	PASS	AB=0.992;AC=26;AF=0.481;AN=54;BaseQRankSum=5.982;DP=553;FS=8.291;HRun=1;HaplotypeScore=117.9925;InbreedingCoeff=-0.3352;MQ=39.54;MQ0=26;MQRankSum=-4.007;QD=4.39;ReadPosRankSum=-0.622;VQSLOD=-0.3017;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:16.29:0,16,295	0/1:12,0:10:50.66:51,0,75	0/0:33,0:2:2.88:0,3,15	0/0:53,0:9:11.51:0,12,115	0/1:38,1:36:53.19:53,0,370	0/1:24,0:24:11.72:12,0,432	0/1:18,0:17:99:99,0,181	0/1:26,1:27:10.80:11,0,359	./.	1/1:17,0:17:35.79:232,36,0	1/1:16,1:15:15.06:166,15,0	0/1:21,1:21:83.06:83,0,332	0/1:14,0:13:99:101,0,110	0/1:20,1:20:99:142,0,151	0/1:13,0:12:15.44:15,0,89	0/1:22,0:20:46.59:47,0,205	0/0:22,0:20:11.33:0,11,287	0/0:18,0:15:23.69:0,24,262	1/1:17,0:14:10.33:145,10,0	1/1:20,0:20:35.99:192,36,0	0/1:6,0:6:26.45:31,0,26	0/1:14,0:13:49.46:49,0,93	0/1:19,0:18:99:140,0,193	0/1:16,0:13:80.63:87,0,81	0/1:22,0:19:25.70:26,0,206	0/1:15,0:15:46.08:100,0,46	0/1:16,0:15:14.20:105,0,14	0/1:9,0:7:2.18:36,0,2
chr10	95303287	.	AT	A	6577.10	PASS	AB=0.875;AC=47;AF=0.839;AN=56;BaseQRankSum=7.046;DP=440;FS=9.331;HRun=11;HaplotypeScore=46.2518;InbreedingCoeff=0.8090;MQ=66.45;MQ0=1;MQRankSum=1.001;QD=17.97;ReadPosRankSum=2.110;VQSLOD=5.5391;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.13:0,66,682	1/1:0,7:7:11.98:99,12,0	0/0:9,0:7:8.99:0,9,81	0/1:6,1:6:12.29:12,0,38	1/1:3,17:20:47.89:388,48,0	1/1:3,12:15:38.94:317,39,0	1/1:5,2:7:5.99:49,6,0	1/1:11,19:29:46.93:369,47,0	1/1:1,14:15:38.95:320,39,0	1/1:4,28:33:82.92:669,83,0	1/1:2,22:24:48.76:430,49,0	1/1:2,12:14:35.96:296,36,0	1/1:4,10:14:29.94:246,30,0	1/1:3,9:12:26.91:216,27,0	1/1:0,16:16:41.95:345,42,0	1/1:3,10:13:23.97:197,24,0	0/0:20,0:21:32.98:0,33,531	0/0:20,0:20:39.06:0,39,402	1/1:1,13:15:40.98:324,41,0	1/1:6,13:19:32.95:271,33,0	1/1:1,5:6:14.97:123,15,0	1/1:1,4:5:8.98:74,9,0	1/1:0,9:9:26.97:222,27,0	1/1:2,6:8:17.97:148,18,0	1/1:1,18:20:55.97:449,56,0	1/1:5,16:21:44.93:369,45,0	1/1:5,22:27:43.23:447,43,0	1/1:0,8:8:23.97:197,24,0
chr10	95303685	.	TA	T	1975.34	PASS	AB=0.735;AC=11;AF=0.196;AN=56;BaseQRankSum=15.976;DP=631;FS=1.740;HRun=1;HaplotypeScore=107.6448;InbreedingCoeff=-0.2466;MQ=76.44;MQ0=2;MQRankSum=-14.881;QD=6.12;ReadPosRankSum=4.322;VQSLOD=0.8522;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.18:0,54,860	0/1:10,8:18:99:206,0,379	0/0:22,0:22:54.14:0,54,778	0/0:24,0:24:69.07:0,69,928	0/1:22,13:35:99:125,0,898	0/0:10,0:10:30.10:0,30,467	0/0:12,0:12:36.08:0,36,535	0/0:39,0:39:99:0,117,1769	0/0:17,0:17:51.17:0,51,792	0/1:22,11:33:99:314,0,869	0/1:23,19:42:99:185,0,872	0/0:15,0:15:45.15:0,45,698	0/0:21,0:21:63.21:0,63,993	0/0:10,1:11:25.74:0,26,462	0/0:23,0:23:63.21:0,63,974	0/0:21,1:22:33.51:0,34,907	0/0:14,0:14:42.06:0,42,638	0/1:8,2:9:20.21:20,0,221	0/0:12,0:12:36.12:0,36,570	0/1:17,15:32:99:233,0,639	0/0:14,0:14:39.13:0,39,611	0/1:19,9:28:95.32:95,0,771	0/1:16,19:35:99:299,0,662	0/0:15,0:14:36.12:0,36,574	0/1:15,18:33:99:406,0,603	0/1:30,4:34:60.20:60,0,1170	0/0:15,1:16:10.49:0,10,669	0/1:16,7:23:99:180,0,697
chr10	95304910	.	TC	T	2791.16	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=2.731;DP=599;FS=155.013;HRun=1;HaplotypeScore=61.2313;InbreedingCoeff=0.1853;MQ=54.63;MQ0=22;MQRankSum=-7.594;QD=7.36;ReadPosRankSum=-6.793;VQSLOD=0.0570;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:40.90:0,41,408	0/1:3,0:3:13.74:14,0,16	0/0:47,0:9:7.74:0,8,96	0/0:23,0:6:13.29:0,13,90	0/1:30,0:30:39.43:39,0,286	0/1:23,0:23:25:25,0,165	0/0:13,1:13:10.29:0,10,199	0/1:29,0:29:53.57:54,0,195	0/1:19,0:19:3.83:4,0,157	1/1:24,0:20:58.07:408,58,0	1/1:28,0:27:73.05:521,73,0	0/1:12,0:12:46.88:47,0,70	0/0:9,9:17:15.64:0,16,129	0/1:7,0:7:29.96:30,0,50	0/1:22,0:22:11.65:12,0,193	0/0:11,0:11:5.84:0,6,200	0/0:35,1:36:33.94:0,34,480	0/1:24,0:23:9.31:9,0,297	1/1:11,8:19:51.21:373,51,0	1/1:25,0:25:69.24:513,69,0	1/1:13,0:11:17.74:101,18,0	0/0:10,5:15:3.83:0,4,163	0/0:20,0:20:28.64:0,29,255	0/1:34,0:33:18.11:18,0,346	0/1:21,0:21:22.11:22,0,209	1/1:10,19:28:70.98:511,71,0	1/1:17,0:17:38.24:280,38,0	0/0:7,0:6:14.33:0,14,100
chr10	95306169	.	C	CTGTG	126.10	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=6.138;DP=389;FS=0.881;HRun=0;HaplotypeScore=88.4056;InbreedingCoeff=-0.1240;MQ=64.08;MQ0=5;MQRankSum=-0.777;QD=0.93;ReadPosRankSum=0.995;VQSLOD=1.5437;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:19:25.21:25,0,232	0/0:6,0:6:5.98:0,6,68	0/0:20,0:11:33.04:0,33,558	0/0:28,0:18:54.05:0,54,905	0/1:14,0:14:6.03:6,0,167	0/0:12,0:11:11.43:0,11,232	0/0:14,0:13:24.05:0,24,349	0/1:19,0:19:37.07:71,0,37	0/0:13,0:13:8.20:0,8,292	0/0:16,0:15:19.81:0,20,534	0/0:9,0:8:9.02:0,9,147	0/0:15,0:15:6.53:0,7,323	0/0:5,0:5:9.03:0,9,135	0/0:9,0:9:7.63:0,8,193	0/1:10,0:10:0.12:0,0,187	0/1:13,0:12:17.16:17,0,375	0/0:26,0:26:66.06:0,66,1138	0/0:20,0:21:56.95:0,57,874	0/1:16,0:15:2.53:3,0,596	0/1:5,0:5:22.89:23,0,86	0/0:15,0:15:30.08:0,30,439	0/0:6,0:6:15.02:0,15,189	0/1:6,0:6:9.15:9,0,81	0/1:9,0:9:28.58:29,0,214	0/0:14,0:13:7.51:0,8,316	0/0:25,0:25:6.98:0,7,787	0/1:14,0:14:8.54:9,0,437	1/1:2,4:9:2.47:69,2,0
chr10	95307528	.	GA	G	3860.22	PASS	AB=0.697;AC=25;AF=0.446;AN=56;BaseQRankSum=-0.295;DP=604;FS=45.695;HRun=11;HaplotypeScore=70.7011;InbreedingCoeff=0.7722;MQ=60.48;MQ0=6;MQRankSum=-1.426;QD=15.44;ReadPosRankSum=1.060;VQSLOD=1.1192;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,1:54:99:0,108,1289	1/1:2,5:7:14.98:123,15,0	0/0:27,0:9:8.12:0,8,124	0/1:23,2:9:27.58:41,0,28	1/1:4,14:18:30.05:330,30,0	0/0:1,0:14:14.20:0,14,71	0/0:5,0:25:66.20:0,66,388	0/0:30,1:33:59.23:0,59,803	1/1:0,16:17:46.99:375,47,0	1/1:3,11:15:37.99:301,38,0	1/1:2,7:8:14.10:121,14,0	0/0:7,0:26:63.23:0,63,367	0/0:6,0:19:51.72:0,52,298	0/0:7,0:20:37.45:0,37,217	1/1:5,24:29:62.92:517,63,0	1/1:3,19:22:53.92:443,54,0	0/0:26,1:27:46.95:0,47,689	0/0:28,2:30:34.90:0,35,767	0/1:7,10:18:6.04:150,0,6	0/1:4,4:9:4.18:103,0,4	1/1:4,18:23:49.95:400,50,0	0/0:5,0:15:27.20:0,27,154	0/0:6,0:15:1.65:0,2,78	0/0:8,0:38:81.89:0,82,475	1/1:3,19:22:44.88:363,45,0	1/1:4,16:20:41.90:345,42,0	1/1:1,11:12:29.97:246,30,0	0/0:10,0:11:29.64:0,30,258
chr10	95308685	.	AGTGT	A	482.89	PASS	AB=0.951;AC=13;AF=0.260;AN=50;BaseQRankSum=1.632;DP=684;FS=3.518;HRun=0;HaplotypeScore=115.1435;InbreedingCoeff=0.7530;MQ=67.48;MQ0=11;MQRankSum=-0.101;QD=2.68;ReadPosRankSum=-0.046;VQSLOD=2.1407;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:21.07:0,21,425	0/0:15,0:15:15.02:0,15,258	./.	./.	0/0:23,0:25:8.51:0,9,103	0/0:17,0:17:15.10:0,15,278	0/0:17,0:17:8.52:0,9,101	0/0:25,0:24:9:0,9,112	0/0:17,0:17:18.01:0,18,310	1/1:25,2:27:6:70,6,0	1/1:9,1:11:6.01:74,6,0	0/0:29,0:28:32.73:0,33,449	0/0:19,0:19:23.76:0,24,312	0/0:33,0:34:42.08:0,42,729	0/0:24,0:26:41.75:0,42,509	0/0:25,0:29:41.26:0,41,572	0/0:24,0:24:29.53:0,30,619	0/0:22,0:38:36.06:0,36,548	./.	1/1:19,5:23:6.02:84,6,0	1/1:30,9:39:6.02:93,6,0	0/0:23,0:23:21.06:0,21,385	0/0:21,0:21:18.06:0,18,374	0/0:23,0:26:36.12:0,36,699	0/1:37,0:39:7.55:8,0,638	1/1:20,0:20:8.86:81,9,0	1/1:11,9:20:14.46:231,14,0	0/0:8,0:8:15.05:0,15,311
chr10	95309416	.	CTT	C	2450.43	PASS	AB=0.912;AC=24;AF=0.429;AN=56;BaseQRankSum=-3.734;DP=702;FS=4.789;HRun=15;HaplotypeScore=111.8743;InbreedingCoeff=0.5268;MQ=63.09;MQ0=14;MQRankSum=2.162;QD=7.85;ReadPosRankSum=3.577;VQSLOD=1.5204;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:44:93.68:0,94,886	0/0:11,0:11:14.50:0,14,94	0/0:61,0:15:14.47:0,14,117	0/0:48,0:15:22.71:0,23,154	0/0:25,0:25:27.98:0,28,249	1/1:8,5:13:19.38:163,19,0	1/1:6,10:16:20.63:170,21,0	0/0:17,0:19:24.68:0,25,226	0/0:23,0:22:27.08:0,27,253	0/1:30,0:30:68.10:145,0,68	0/1:15,1:16:27.17:27,0,116	1/1:9,13:22:32.74:283,33,0	1/1:9,14:22:5.82:53,6,0	1/1:15,7:22:18.83:215,19,0	0/0:24,0:25:17.55:0,18,233	0/0:14,0:15:12.38:0,12,278	0/0:39,0:41:91.70:0,92,980	0/0:30,0:28:55.89:0,56,502	1/1:19,1:19:1.78:148,2,0	0/1:18,0:19:82.43:85,0,82	1/1:25,0:25:24.73:191,25,0	1/1:2,11:12:29.87:251,30,0	0/1:5,10:17:3.26:201,0,3	1/1:11,15:27:26.14:420,26,0	0/0:29,0:29:53.20:0,53,370	0/1:32,1:34:99:205,0,136	0/1:14,0:14:31.16:98,0,31	0/0:8,0:16:26.97:0,27,234
chr10	95309430	.	TTC	T	2220.85	PASS	AB=0.981;AC=28;AF=0.500;AN=56;BaseQRankSum=5.730;DP=748;FS=13.306;HRun=0;HaplotypeScore=124.4105;InbreedingCoeff=-0.1495;MQ=61.89;MQ0=14;MQRankSum=0.886;QD=4.57;ReadPosRankSum=0.274;VQSLOD=2.3733;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:35.55:0,36,823	0/1:11,0:11:5.97:18,0,6	0/0:66,0:15:10.37:0,10,76	0/0:58,0:16:12.65:0,13,154	0/1:32,0:32:26.73:100,0,27	0/1:15,0:15:68.56:69,0,69	0/1:20,1:20:42.56:43,0,79	0/1:18,0:18:63.75:64,0,104	0/1:24,0:23:37.57:59,0,38	1/1:33,0:33:7.04:243,7,0	0/1:18,0:18:8.99:91,0,9	0/1:21,2:23:38.30:139,0,38	0/1:21,0:20:4.57:5,0,73	0/1:17,3:20:41.73:110,0,42	0/1:22,0:22:9.67:107,0,10	0/1:15,0:15:46.59:47,0,55	0/0:39,0:39:64.98:0,65,996	0/0:33,0:31:6.47:0,6,362	1/1:21,0:20:21.44:208,21,0	1/1:22,0:22:16.24:213,16,0	1/1:20,0:20:27.87:173,28,0	0/1:18,0:17:38.16:38,0,65	0/1:21,1:22:56.25:56,0,135	0/1:29,0:29:61.51:140,0,62	0/1:28,0:27:63.81:64,0,83	1/1:35,0:35:34.89:263,35,0	1/1:18,0:18:4.78:150,5,0	0/0:20,0:20:19.98:0,20,261
chr10	95309432	.	C	CT	2272.06	PASS	AB=0.977;AC=20;AF=0.357;AN=56;BaseQRankSum=-1.147;DP=765;FS=10.932;HRun=15;HaplotypeScore=124.5302;InbreedingCoeff=0.4628;MQ=61.19;MQ0=14;MQRankSum=2.499;QD=7.38;ReadPosRankSum=-3.443;VQSLOD=0.5015;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:31.43:0,31,628	1/1:11,0:11:8.61:232,9,0	0/0:62,0:14:10.96:0,11,64	0/0:52,1:16:10.15:0,10,92	1/1:33,1:34:39.21:493,39,0	0/0:17,0:17:39.81:0,40,277	0/0:21,0:20:45.28:0,45,308	0/0:17,0:17:15.37:0,15,97	1/1:23,2:24:27.21:313,27,0	1/1:32,0:33:3.12:158,3,0	0/1:19,0:20:28.44:59,0,28	0/0:24,0:24:48.83:0,49,334	0/0:23,0:22:16.95:0,17,140	0/0:21,0:22:38.76:0,39,258	1/1:22,0:22:2.82:245,3,0	1/1:15,1:16:3.99:167,4,0	0/0:40,0:40:53.29:0,53,585	0/0:36,0:34:36.30:0,36,321	0/1:25,0:24:20.22:71,0,20	0/1:23,1:24:6.80:139,0,7	0/1:18,0:19:6.60:111,0,7	0/0:18,0:17:32.55:0,33,247	0/0:22,0:23:55.59:0,56,403	0/0:28,0:29:66.99:0,67,495	1/1:26,1:26:7.48:199,7,0	0/1:33,0:33:5.84:182,0,6	0/1:18,1:19:14.72:84,0,15	0/0:21,0:21:32.16:0,32,247
chr10	95311623	.	GT	G	6583.39	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.487;DP=716;FS=3.605;HRun=4;HaplotypeScore=65.6567;InbreedingCoeff=0.9997;MQ=83.34;MQ0=0;MQRankSum=0.750;QD=31.80;ReadPosRankSum=0.705;VQSLOD=5.3938;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1659	0/0:10,0:10:30.09:0,30,405	0/0:23,0:23:57.19:0,57,781	0/0:17,0:17:39.13:0,39,529	0/0:25,0:25:75.25:0,75,1050	0/0:28,0:28:84.24:0,84,1126	0/0:19,0:19:54.16:0,54,738	0/0:33,0:33:87.28:0,87,1204	0/0:24,0:24:66.21:0,66,906	1/1:2,27:29:81.23:958,81,0	1/1:2,20:22:54.16:648,54,0	0/0:22,0:22:66.22:0,66,923	0/0:33,0:33:99:0,99,1367	0/0:26,0:26:78.26:0,78,1092	0/0:33,0:33:96.32:0,96,1344	0/0:29,0:29:81.27:0,81,1134	0/0:17,0:17:51.16:0,51,699	0/0:26,0:26:72.22:0,72,986	1/1:2,30:32:87.25:1032,87,0	1/1:0,29:29:81.25:972,81,0	1/1:1,23:24:63.19:756,63,0	0/0:27,0:27:72.23:0,72,992	0/0:17,0:17:48.15:0,48,655	0/0:36,0:36:99:0,99,1385	0/0:13,0:13:39.13:0,39,546	1/1:1,24:25:66.18:778,66,0	1/1:4,42:46:99:1440,120,0	0/0:9,0:9:27.09:0,27,378
chr10	95313382	.	A	ACC	2004.59	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=0.056;DP=646;FS=18.246;HRun=8;HaplotypeScore=86.1364;InbreedingCoeff=0.9779;MQ=86.25;MQ0=0;MQRankSum=-0.704;QD=14.85;ReadPosRankSum=-0.960;VQSLOD=0.1409;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:90.21:0,90,993	0/0:8,0:8:15.04:0,15,167	0/0:25,0:25:42.37:0,42,522	0/0:24,0:23:53.56:0,54,509	0/0:29,0:29:72.16:0,72,800	0/0:21,0:21:54.13:0,54,602	0/0:20,0:20:48.11:0,48,535	0/0:30,0:30:78.08:0,78,839	0/0:28,0:28:72.16:0,72,801	1/1:10,0:34:55.08:193,55,0	1/1:1,0:15:29.94:103,30,0	0/0:21,0:21:42.06:0,42,459	0/0:29,0:29:87.19:0,87,955	0/0:22,0:22:51.11:0,51,567	0/0:35,0:35:84.13:0,84,914	0/0:29,0:29:81.19:0,81,893	0/0:18,0:18:51.13:0,51,568	0/0:18,0:18:42.10:0,42,468	1/1:3,9:13:29.57:397,30,0	1/1:7,15:22:36.08:520,36,0	1/1:4,12:17:8.52:104,9,0	0/0:23,0:23:66.18:0,66,733	0/0:34,0:34:87.19:0,87,947	0/0:29,0:29:78.20:0,78,869	0/0:22,0:22:60.13:0,60,655	1/1:4,2:10:11.01:112,11,0	1/1:3,20:23:51.13:770,51,0	0/0:11,0:11:33.09:0,33,364
chr10	95314153	.	TGTGA	T	6801.84	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=3.500;DP=728;FS=2.513;HRun=0;HaplotypeScore=143.0758;InbreedingCoeff=0.9936;MQ=72.69;MQ0=3;MQRankSum=-2.847;QD=34.35;ReadPosRankSum=1.367;VQSLOD=4.8686;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.22:0,93,2226	0/0:15,0:15:45.13:0,45,1095	0/0:34,0:28:80.04:0,80,1652	0/0:27,0:23:59.43:0,59,1038	0/0:35,0:35:99:0,99,2462	0/0:32,0:32:90.30:0,90,1848	0/0:15,0:15:39.08:0,39,777	0/0:42,0:42:99:0,120,2679	0/0:28,0:28:78.23:0,78,1860	1/1:2,28:29:78.21:1348,78,0	1/1:3,30:33:38.84:563,39,0	0/0:19,0:19:54.17:0,54,1087	0/0:28,0:28:78.24:0,78,1556	0/0:22,0:22:66.20:0,66,1325	0/0:22,0:22:63.16:0,63,1437	0/0:20,0:20:60.17:0,60,1450	0/0:19,0:19:51.15:0,51,1185	0/0:9,0:9:21.07:0,21,566	1/1:2,24:26:72.15:1148,72,0	1/1:1,34:35:71.99:1186,72,0	1/1:1,10:11:12.04:228,12,0	0/0:24,0:24:66.19:0,66,1236	0/0:30,0:30:81.24:0,81,1609	0/0:25,0:25:72.17:0,72,1373	0/0:32,0:31:96.28:0,96,2242	1/1:2,32:33:90.17:1421,90,0	1/1:1,28:29:48.16:909,48,0	0/0:19,0:19:57:0,57,1277
chr10	95315330	.	GCAGA	G	7540.51	PASS	AB=0.964;AC=29;AF=0.518;AN=56;BaseQRankSum=5.078;DP=809;FS=2.859;HRun=0;HaplotypeScore=142.5187;InbreedingCoeff=0.8905;MQ=65.04;MQ0=5;MQRankSum=4.071;QD=16.72;ReadPosRankSum=5.453;VQSLOD=4.5760;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:33:45.15:0,45,841	1/1:4,10:14:21.06:335,21,0	0/0:27,0:21:15.03:0,15,236	0/0:17,0:14:3.01:0,3,60	1/1:12,14:26:32.96:440,33,0	1/1:7,14:21:24.08:383,24,0	1/1:13,13:26:17.61:287,18,0	0/0:48,0:48:68.89:0,69,1176	1/1:9,23:32:48.16:766,48,0	0/0:21,0:35:47.81:0,48,817	0/0:12,0:22:5.88:0,6,50	1/1:9,17:26:42.14:659,42,0	1/1:11,12:23:35.71:536,36,0	1/1:11,16:27:29.46:439,29,0	1/1:9,25:34:48.16:766,48,0	1/1:12,26:38:60.20:958,60,0	0/0:13,0:36:57.19:0,57,991	0/0:11,0:22:24.08:0,24,429	0/0:22,0:22:29.46:0,29,611	0/0:27,0:27:39.12:0,39,883	0/1:51,2:53:5.49:5,0,1798	1/1:10,21:31:36.01:575,36,0	1/1:15,15:29:18.42:288,18,0	1/1:15,26:40:48.13:766,48,0	1/1:11,17:28:21.07:335,21,0	0/0:34,1:35:21.31:0,21,1419	0/0:26,1:27:12.31:0,12,1262	0/0:6,0:6:12.04:0,12,249
chr10	95320993	.	G	GA	4133.95	PASS	AB=0.968;AC=15;AF=0.268;AN=56;BaseQRankSum=-10.632;DP=587;FS=1.183;HRun=9;HaplotypeScore=60.5232;InbreedingCoeff=0.8581;MQ=80.96;MQ0=0;MQRankSum=-1.749;QD=21.31;ReadPosRankSum=-0.615;VQSLOD=4.1050;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:59.99:0,60,521	0/0:11,0:11:29.99:0,30,260	0/1:29,1:28:7.47:7,0,290	0/0:14,0:13:17.43:0,17,141	0/0:32,0:32:89.94:0,90,772	0/0:29,0:30:83.02:0,83,709	0/0:9,0:9:23.97:0,24,204	0/0:22,0:22:53.96:0,54,468	0/0:19,0:20:59.03:0,59,501	1/1:9,28:38:67.01:942,67,0	1/1:6,18:24:51.14:564,51,0	0/0:22,0:22:65.98:0,66,570	0/0:23,0:23:62.99:0,63,547	0/0:20,0:20:44.96:0,45,388	0/0:25,1:27:33.87:0,34,500	0/0:18,0:18:53.99:0,54,469	0/0:16,0:16:41.96:0,42,359	0/0:15,2:17:5.77:0,6,273	1/1:0,12:12:36.08:388,36,0	1/1:3,21:24:63.10:670,63,0	1/1:1,5:7:17.88:180,18,0	0/0:27,0:27:0.15:0,0,407	0/0:27,1:28:47.66:0,48,628	0/0:9,0:9:23.99:0,24,208	0/0:18,0:18:50.96:0,51,439	1/1:5,21:26:40.12:671,40,0	1/1:7,25:32:66.01:711,66,0	0/0:10,0:10:26.99:0,27,234
chr10	95324984	.	AAAAAC	A	9090.81	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=13.772;DP=677;FS=3.210;HRun=0;HaplotypeScore=130.2515;InbreedingCoeff=0.9862;MQ=75.40;MQ0=3;MQRankSum=-0.420;QD=33.55;ReadPosRankSum=1.898;VQSLOD=4.4950;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:75.26:0,75,2028	1/1:0,4:4:12.04:222,12,0	0/0:34,0:26:29.93:0,30,711	0/0:61,0:36:25.05:0,25,673	1/1:4,26:30:81.16:1390,81,0	1/1:4,19:23:48.16:886,48,0	1/1:11,10:21:24.08:443,24,0	0/0:28,0:28:30.09:0,30,759	1/1:4,18:22:45.15:831,45,0	0/0:34,0:34:63.22:0,63,1749	0/0:16,0:16:39.12:0,39,1016	1/1:7,13:20:36.12:665,36,0	1/1:8,13:21:33.11:609,33,0	1/1:6,11:17:27.09:499,27,0	1/1:8,21:29:54.19:997,54,0	1/1:13,5:18:9.03:166,9,0	0/0:42,0:42:84.29:0,84,2353	0/0:29,0:29:66.23:0,66,1816	0/0:32,0:32:48.16:0,48,1323	0/0:14,0:14:33.11:0,33,897	0/0:13,0:13:21.07:0,21,597	1/1:8,12:20:33.11:609,33,0	1/1:2,12:14:26.87:498,27,0	1/1:7,11:18:33.11:609,33,0	1/1:2,12:14:36.12:665,36,0	0/0:29,0:29:57.20:0,57,1539	0/0:25,0:25:54.19:0,54,1482	0/0:18,0:18:45.15:0,45,1268
chr10	95325780	.	T	TA	1165.32	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.512;DP=629;FS=2.087;HRun=8;HaplotypeScore=56.6398;InbreedingCoeff=0.9375;MQ=68.62;MQ0=0;MQRankSum=1.150;QD=24.28;ReadPosRankSum=-4.517;VQSLOD=2.3715;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:85.30:0,85,932	0/0:8,0:8:24:0,24,215	0/0:8,0:8:9.87:0,10,79	0/0:5,0:5:8.91:0,9,68	0/0:25,0:25:60:0,60,541	0/0:19,0:19:54.02:0,54,491	0/0:20,0:20:57.01:0,57,516	1/1:8,33:41:99:1111,99,0	0/0:23,0:23:69.01:0,69,622	0/0:30,0:29:75.02:0,75,684	0/0:24,0:24:56.74:0,57,500	0/0:23,0:23:60.03:0,60,549	0/0:27,0:27:72.02:0,72,659	0/0:19,0:19:54.01:0,54,491	0/0:31,0:31:93.02:0,93,842	0/0:29,0:29:78.04:0,78,714	0/0:21,0:21:56.93:0,57,497	0/0:20,0:20:42:0,42,378	0/0:23,0:23:57.02:0,57,522	0/0:25,0:25:75.01:0,75,677	0/0:25,0:25:69.04:0,69,631	0/0:27,0:27:75.02:0,75,682	0/0:21,0:21:63.02:0,63,571	0/0:17,0:17:35.96:0,36,318	0/0:22,0:22:66:0,66,594	0/0:30,0:30:81.03:0,81,737	0/0:20,0:20:54.03:0,54,494	1/1:2,5:7:15.04:173,15,0
chr10	95326191	.	CAGAGAGAG	C	910.53	PASS	AB=1.000;AC=19;AF=0.380;AN=50;BaseQRankSum=3.331;DP=577;FS=38.486;HRun=0;HaplotypeScore=146.9958;InbreedingCoeff=0.6640;MQ=71.66;MQ0=13;MQRankSum=-4.466;QD=4.90;ReadPosRankSum=-1.368;VQSLOD=1.2298;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:9.03:0,9,195	./.	./.	./.	1/1:16,0:16:1.35:3,1,0	1/1:14,0:16:5.96:69,6,0	1/1:10,3:13:6.01:149,6,0	0/0:29,0:28:11.86:0,12,123	0/0:22,0:22:9.03:0,9,245	0/0:21,0:21:33.11:0,33,1153	0/0:13,0:13:9.03:0,9,343	1/1:18,4:22:12.04:275,12,0	1/1:14,5:19:3.01:74,3,0	1/1:19,4:23:6.02:149,6,0	0/0:14,0:14:6.02:0,6,165	0/0:33,0:33:19.62:0,20,524	0/0:16,0:27:21.07:0,21,562	0/0:16,0:16:21.07:0,21,729	0/0:15,0:15:14.73:0,15,433	0/0:19,0:19:15.04:0,15,340	0/0:25,0:25:36.12:0,36,1194	1/1:11,6:17:5.93:72,6,0	1/1:16,6:22:6.02:85,6,0	0/1:22,0:21:17.24:41,0,17	1/1:10,4:15:8.79:161,9,0	0/0:24,0:30:57.20:0,57,1836	0/0:20,0:20:33.11:0,33,979	0/0:5,0:5:3.01:0,3,77
chr10	95327277	.	CA	C	8125.03	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=5.064;DP=720;FS=1.328;HRun=1;HaplotypeScore=84.4227;InbreedingCoeff=0.9998;MQ=66.35;MQ0=1;MQRankSum=1.630;QD=39.83;ReadPosRankSum=1.461;VQSLOD=5.4497;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.31:0,96,1493	0/0:12,0:12:36.11:0,36,550	0/0:22,0:21:63.21:0,63,960	0/0:14,0:13:29.67:0,30,396	0/0:35,0:35:99:0,105,1672	0/0:35,0:35:99:0,105,1654	0/0:13,0:13:39.12:0,39,595	0/0:30,0:30:90.30:0,90,1415	0/0:21,0:21:63.20:0,63,979	1/1:0,31:31:93.29:1268,93,0	1/1:0,17:17:48.16:665,48,0	0/0:27,0:27:81.27:0,81,1274	0/0:34,0:34:99:0,102,1604	0/0:28,0:28:84.29:0,84,1339	0/0:30,0:30:90.31:0,90,1435	0/0:24,0:24:72.23:0,72,1126	0/0:29,0:29:86.78:0,87,1342	0/0:17,0:17:48.16:0,48,767	1/1:0,17:16:48.16:665,48,0	1/1:0,23:23:69.23:957,69,0	1/1:0,29:28:78.26:1091,78,0	0/0:30,0:30:90.28:0,90,1385	0/0:23,0:23:69.24:0,69,1103	0/0:19,0:19:57.18:0,57,888	0/0:29,0:29:87.26:0,87,1338	1/1:1,39:40:99:1633,120,0	1/1:0,47:47:99:1846,132,0	0/0:12,0:12:36.10:0,36,546
chr10	95327804	.	C	CT	5540.87	PASS	AB=0.676;AC=7;AF=0.125;AN=56;BaseQRankSum=18.339;DP=874;FS=13.936;HRun=1;HaplotypeScore=121.2383;InbreedingCoeff=-0.1430;MQ=68.85;MQ0=0;MQRankSum=-17.553;QD=16.74;ReadPosRankSum=-1.324;VQSLOD=3.6477;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1501	0/0:11,0:10:33.11:0,33,458	0/0:17,0:17:48.01:0,48,595	0/0:13,0:13:39.04:0,39,486	0/0:24,0:24:66.21:0,66,904	0/0:23,0:23:69.22:0,69,937	0/0:31,0:31:93.29:0,93,1278	0/0:37,0:37:99:0,108,1454	0/0:31,0:31:87.29:0,87,1212	0/1:28,29:57:99:980,0,900	0/1:14,18:32:99:674,0,412	0/0:35,0:35:99:0,102,1385	0/0:27,0:27:78.26:0,78,1088	0/0:46,0:46:99:0,135,1832	0/0:28,0:28:81.27:0,81,1131	0/0:31,0:31:90.26:0,90,1194	0/0:29,0:29:87.29:0,87,1215	0/0:25,0:25:72.24:0,72,1006	0/1:19,15:34:99:482,0,617	0/1:22,32:54:99:1112,0,686	0/1:35,16:51:99:551,0,1112	0/0:10,0:10:30.10:0,30,419	0/0:14,0:14:33.11:0,33,459	0/0:49,0:49:99:0,141,1930	0/0:16,0:16:45.15:0,45,628	0/1:32,28:60:99:987,0,1082	0/1:21,22:43:99:755,0,689	0/0:8,0:8:24.08:0,24,331
chr10	95333372	.	C	CCGGCA	10084.30	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-5.791;DP=654;FS=1.239;HRun=0;HaplotypeScore=172.3933;InbreedingCoeff=0.9939;MQ=82.81;MQ0=0;MQRankSum=-10.849;QD=49.92;ReadPosRankSum=1.618;VQSLOD=5.1478;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:93.30:0,93,1864	0/0:12,0:12:30.10:0,30,616	0/0:17,0:17:33.10:0,33,622	0/0:25,0:25:69.19:0,69,1253	0/0:19,0:19:39.12:0,39,764	1/1:5,15:20:42.10:1148,42,0	1/1:18,17:35:63.20:1557,63,0	0/0:19,0:19:48.16:0,48,968	0/0:23,0:23:54:0,54,1058	0/0:24,0:24:63.21:0,63,1242	0/0:11,0:11:18.06:0,18,369	1/1:8,17:26:45.15:1362,45,0	1/1:6,25:31:56.79:1670,57,0	1/1:5,23:29:72.25:2140,72,0	0/0:34,0:34:81.26:0,81,1598	0/0:22,0:22:36.12:0,36,739	0/0:30,0:30:81.27:0,81,1626	0/0:22,0:22:51.13:0,51,1005	0/0:17,0:17:36.11:0,36,701	0/0:18,0:18:45.15:0,45,920	0/0:50,0:50:99:0,123,2453	1/1:10,11:24:20.11:587,20,0	1/1:6,8:14:14.08:453,14,0	1/1:5,17:23:45.54:1168,46,0	0/0:14,0:14:36.11:0,36,691	0/0:18,0:18:48.16:0,48,985	0/0:29,0:29:66.16:0,66,1252	0/0:9,0:9:24.04:0,24,440
chr10	95333564	.	CT	C	456.09	PASS	AB=0.819;AC=13;AF=0.232;AN=56;BaseQRankSum=-2.515;DP=626;FS=0.622;HRun=16;HaplotypeScore=80.0066;InbreedingCoeff=0.5775;MQ=68.20;MQ0=1;MQRankSum=2.141;QD=2.41;ReadPosRankSum=6.039;VQSLOD=-0.6265;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,1:43:18.68:0,19,187	0/0:5,0:16:22.76:0,23,127	0/0:14,0:13:2.99:0,3,118	0/0:12,0:8:2.98:0,3,22	0/0:10,0:22:34.85:0,35,162	0/0:8,0:20:18.43:0,18,97	0/0:6,0:14:12.75:0,13,68	0/0:19,0:35:54.04:0,54,288	0/0:9,0:16:18.19:0,18,97	1/1:21,12:38:35.59:189,36,0	1/1:6,4:11:8.73:54,9,0	0/0:19,1:20:28.29:0,28,218	0/0:11,0:34:15.02:0,15,91	0/0:8,0:24:8.70:0,9,49	0/0:6,0:21:11.71:0,12,71	0/0:6,0:25:11.59:0,12,66	0/0:29,0:35:54.09:0,54,417	0/1:27,1:37:7.20:7,0,139	1/1:16,3:19:9.80:58,10,0	0/1:14,8:22:23.11:87,0,23	1/1:7,10:20:19.38:113,19,0	0/0:9,0:11:9.87:0,10,50	0/0:7,0:13:12.07:0,12,69	0/0:10,0:26:25.77:0,26,139	0/0:10,0:24:10.27:0,10,47	0/1:14,6:21:12.42:31,0,12	1/1:7,13:20:14.46:90,14,0	0/0:2,0:11:8.52:0,9,43
chr10	95334375	.	T	TC	23509.28	PASS	AB=0.875;AC=55;AF=0.982;AN=56;BaseQRankSum=-1.019;DP=701;FS=0.000;HRun=3;HaplotypeScore=338.6788;InbreedingCoeff=0.3039;MQ=54.32;MQ0=0;MQRankSum=-2.910;QD=33.54;ReadPosRankSum=1.904;VQSLOD=2.7872;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,25:36:84.14:1089,84,0	1/1:3,12:15:39.06:508,39,0	1/1:7,6:13:0.65:302,1,0	0/1:6,1:7:3.95:4,0,40	1/1:8,20:28:65.97:825,66,0	1/1:9,20:29:66.16:881,66,0	1/1:9,26:35:84.20:1109,84,0	1/1:4,20:24:60.18:818,60,0	1/1:3,17:20:54.18:752,54,0	1/1:6,37:43:99:1563,117,0	1/1:5,8:13:27:349,27,0	1/1:6,27:33:90.12:1170,90,0	1/1:3,23:26:75.25:1044,75,0	1/1:10,28:38:99:1310,102,0	1/1:8,36:44:99:1647,123,0	1/1:5,23:27:78.26:1072,78,0	1/1:5,17:22:51.04:641,51,0	1/1:6,17:23:63.17:856,63,0	1/1:4,22:26:72.22:983,72,0	1/1:1,7:8:21:268,21,0	1/1:11,17:27:51.08:630,51,0	1/1:2,20:22:60.16:808,60,0	1/1:2,22:24:66.21:891,66,0	1/1:4,15:18:30.01:392,30,0	1/1:2,19:21:60.20:827,60,0	1/1:2,28:30:84.27:1148,84,0	1/1:3,29:33:90.30:1246,90,0	1/1:3,9:12:27.09:376,27,0
chr10	95334521	.	TCC	T	13623.92	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=4.194;DP=654;FS=0.912;HRun=10;HaplotypeScore=89.3899;InbreedingCoeff=0.9760;MQ=75.59;MQ0=2;MQRankSum=-1.663;QD=25.66;ReadPosRankSum=3.442;VQSLOD=4.8953;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,44:45:99:1289,117,0	1/1:0,9:9:18.05:201,18,0	0/0:18,0:19:39.79:0,40,481	0/0:22,0:22:10.01:0,10,298	1/1:2,18:20:48.11:531,48,0	1/1:1,20:20:48.08:521,48,0	1/1:4,27:31:72.17:803,72,0	0/0:23,0:23:33.96:0,34,446	1/1:2,26:28:63.16:702,63,0	1/1:4,18:22:54.12:602,54,0	1/1:0,13:13:30.08:334,30,0	1/1:3,21:24:54.10:588,54,0	1/1:5,24:29:66.17:735,66,0	1/1:1,27:28:75.20:835,75,0	1/1:6,31:37:84.20:936,84,0	1/1:5,22:26:63.14:702,63,0	0/0:21,0:21:62.64:0,63,906	0/0:28,0:30:81.27:0,81,1261	1/1:6,14:20:42.08:459,42,0	1/1:4,10:14:30.06:334,30,0	1/1:5,43:48:99:1176,108,0	1/1:5,12:17:27.06:301,27,0	1/1:1,9:10:27.07:301,27,0	1/1:2,19:21:42.11:468,42,0	1/1:2,23:25:60.16:669,60,0	1/1:3,17:20:51.13:567,51,0	1/1:4,18:22:51.13:568,51,0	0/0:4,0:4:9.03:0,9,136
chr10	95336155	.	CT	C	6605.95	PASS	AB=0.974;AC=53;AF=0.946;AN=56;BaseQRankSum=8.160;DP=621;FS=15.165;HRun=1;HaplotypeScore=126.5988;InbreedingCoeff=-0.0574;MQ=79.36;MQ0=0;MQRankSum=1.226;QD=10.64;ReadPosRankSum=8.480;VQSLOD=0.9217;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:70.89:415,71,0	1/1:11,0:11:31.01:159,31,0	0/1:18,0:18:24.52:47,0,25	0/1:22,2:24:76.75:77,0,179	1/1:19,0:19:44.90:229,45,0	1/1:16,0:16:20.37:163,20,0	1/1:28,0:28:38.54:324,39,0	1/1:24,0:24:26.25:149,26,0	1/1:29,0:29:19.60:288,20,0	1/1:28,0:28:47.15:286,47,0	1/1:11,0:11:25.78:142,26,0	1/1:32,1:33:82.95:466,83,0	1/1:29,0:29:30.51:332,31,0	1/1:22,0:22:60.72:345,61,0	1/1:39,0:39:26.29:401,26,0	1/1:21,0:21:37.02:246,37,0	1/1:30,0:30:69.42:333,69,0	1/1:25,0:25:24.84:243,25,0	0/1:13,0:13:15.65:82,0,16	1/1:16,0:16:17.69:144,18,0	1/1:25,0:25:55.22:264,55,0	1/1:17,0:17:36.31:184,36,0	1/1:13,1:14:34.36:189,34,0	1/1:27,0:27:48.68:311,49,0	1/1:8,0:8:19.55:98,20,0	1/1:26,0:26:31.30:249,31,0	1/1:24,0:24:60.09:322,60,0	1/1:7,0:7:19.80:114,20,0
chr10	95340159	.	C	CT	6256.83	PASS	AB=0.604;AC=26;AF=0.464;AN=56;BaseQRankSum=-3.837;DP=586;FS=6.789;HRun=10;HaplotypeScore=70.6634;InbreedingCoeff=0.7052;MQ=73.73;MQ0=1;MQRankSum=-2.123;QD=18.79;ReadPosRankSum=3.634;VQSLOD=5.7129;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,32:40:71.31:833,71,0	0/1:2,3:5:12.59:84,0,13	0/0:19,0:18:22.10:0,22,189	0/0:14,0:15:24.67:0,25,188	0/1:4,15:20:10.22:300,0,10	1/1:3,13:17:11.28:310,11,0	1/1:9,21:34:16.27:507,16,0	0/0:18,1:21:19.94:0,20,335	0/1:5,6:11:3.72:154,0,4	0/0:20,0:20:44.92:0,45,369	0/0:15,0:15:32.95:0,33,270	1/1:5,17:25:11.69:437,12,0	0/1:2,15:20:21.77:307,0,22	1/1:4,23:28:59.98:622,60,0	1/1:2,18:21:20.55:392,21,0	1/1:2,23:26:25.75:569,26,0	0/0:20,0:20:53.77:0,54,416	0/0:25,1:26:39.89:0,40,529	0/0:13,0:13:29.95:0,30,246	0/0:14,0:14:17.87:0,18,140	0/0:34,1:37:58.96:0,59,666	1/1:3,17:20:18.74:394,19,0	1/1:5,13:20:20.13:374,20,0	1/1:5,21:29:31.49:526,31,0	1/1:1,16:17:42.11:447,42,0	0/0:25,0:28:68.74:0,69,519	0/0:16,0:19:48.01:0,48,357	0/0:5,0:5:2.99:0,3,25
chr10	95340989	.	AACACAC	A	2372.75	PASS	AB=0.650;AC=10;AF=0.179;AN=56;BaseQRankSum=6.445;DP=612;FS=0.000;HRun=0;HaplotypeScore=141.8159;InbreedingCoeff=0.6982;MQ=69.57;MQ0=8;MQRankSum=-9.329;QD=16.25;ReadPosRankSum=0.752;VQSLOD=3.0451;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:39:20.93:0,21,447	1/1:5,5:10:9.03:184,9,0	0/0:31,0:20:3.01:0,3,42	0/0:38,0:28:6.47:0,6,67	0/1:11,11:22:4.23:15,0,4	0/0:9,0:11:18.04:0,18,355	0/0:20,0:22:30.09:0,30,677	0/0:24,0:24:11.11:0,11,763	1/1:11,9:21:24.08:472,24,0	0/0:14,0:15:28.33:0,28,609	0/0:10,0:12:21.07:0,21,485	0/0:15,0:15:23.82:0,24,582	0/0:10,0:11:15.02:0,15,258	0/0:17,0:19:36.11:0,36,828	1/1:8,16:27:39.13:696,39,0	1/1:21,18:40:39.60:758,40,0	0/0:19,0:21:36.03:0,36,676	0/0:22,0:22:45.07:0,45,1035	0/0:13,0:13:7.79:0,8,193	0/0:21,0:22:39.11:0,39,987	0/0:31,0:41:59.30:0,59,1289	0/0:14,0:15:11.13:0,11,212	0/0:13,0:14:18.06:0,18,463	0/0:34,0:36:68.26:0,68,1927	0/1:11,13:26:6.60:411,0,7	0/0:19,0:18:21.53:0,22,575	0/0:17,0:21:30.10:0,30,738	0/0:3,0:3:5.98:0,6,53
chr10	95341665	.	T	TCAG	329.99	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=-0.043;DP=611;FS=12.124;HRun=0;HaplotypeScore=112.3102;InbreedingCoeff=0.5686;MQ=70.58;MQ0=0;MQRankSum=-0.237;QD=10.00;ReadPosRankSum=-1.381;VQSLOD=1.9202;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,8:33:22.43:422,22,0	0/0:5,0:6:5.99:0,6,63	0/0:17,0:15:18.06:0,18,245	0/0:21,0:21:36.11:0,36,479	0/0:18,0:18:2.60:0,3,42	0/0:17,0:17:24.08:0,24,336	0/0:29,0:29:66.22:0,66,923	0/0:22,0:22:21.07:0,21,294	0/0:29,0:30:75.20:0,75,1011	0/0:19,0:19:27.08:0,27,363	./.	0/0:32,0:33:75.19:0,75,989	0/0:19,0:19:42.12:0,42,570	0/0:31,0:31:78.26:0,78,1092	0/0:20,0:20:36.12:0,36,504	0/0:23,0:23:48.15:0,48,655	0/0:44,0:46:99:0,111,1491	0/0:28,0:27:57.19:0,57,798	0/0:17,0:17:17.17:0,17,235	0/0:12,0:12:6.02:0,6,84	0/0:41,0:41:69.23:0,69,959	0/0:12,0:12:12.04:0,12,166	0/0:4,0:4:2.80:0,3,42	0/0:42,0:43:99:0,99,1329	0/0:22,0:22:18.05:0,18,237	0/0:21,0:21:21.07:0,21,294	0/0:16,0:16:24.08:0,24,336	0/0:6,0:6:8.99:0,9,126
chr10	95341988	.	T	TCTGAGAAAATAAGA	79906.88	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-8.118;DP=720;FS=2.401;HRun=0;HaplotypeScore=199.7323;InbreedingCoeff=0.9826;MQ=71.81;MQ0=0;MQRankSum=-14.437;QD=129.30;ReadPosRankSum=0.924;VQSLOD=5.0438;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,18:38:78.27:4531,78,0	1/1:1,2:6:9.03:634,9,0	0/0:21,0:21:51.20:0,51,1653	0/0:20,0:20:36.15:0,36,1451	1/1:7,14:26:56.26:3445,56,0	1/1:7,6:19:30.10:1921,30,0	1/1:10,14:32:72.25:4606,72,0	1/1:20,2:42:99:5903,117,0	1/1:8,14:36:63.22:4418,63,0	1/1:4,18:32:93.32:5449,93,0	1/1:6,8:14:33.11:2315,33,0	1/1:5,24:34:86.88:5921,87,0	1/1:10,13:29:63.22:4085,63,0	1/1:8,11:28:57.19:3642,57,0	1/1:6,10:27:48.16:3207,48,0	1/1:5,12:25:45.15:3026,45,0	0/0:31,0:30:90.30:0,90,3607	0/0:30,0:30:90.30:0,90,3451	1/1:8,8:23:66.19:3507,66,0	1/1:3,7:21:33.11:2104,33,0	1/1:10,5:27:30.10:1810,30,0	1/1:2,16:23:57.20:3813,57,0	1/1:7,2:13:24.08:1466,24,0	1/1:6,10:27:33.11:1846,33,0	1/1:7,9:22:42.12:2517,42,0	1/1:10,9:28:84.27:4333,84,0	1/1:6,12:31:54.04:3602,54,0	1/1:4,9:15:27.09:1807,27,0
chr10	95342408	.	A	AAGAC	28567.89	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=3.141;DP=605;FS=3.153;HRun=0;HaplotypeScore=112.3890;InbreedingCoeff=0.9854;MQ=84.03;MQ0=0;MQRankSum=-10.656;QD=57.14;ReadPosRankSum=1.208;VQSLOD=6.5242;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,27:34:81.28:2044,81,0	1/1:2,5:7:21.07:508,21,0	0/0:28,0:28:69.24:0,69,1225	0/0:22,0:22:48.60:0,49,818	1/1:9,18:27:54.19:1326,54,0	1/1:3,12:15:39.13:997,39,0	1/1:7,20:28:54.19:1400,54,0	1/1:12,21:34:78.25:1937,78,0	1/1:10,12:22:39.13:965,39,0	1/1:10,6:17:30.10:703,30,0	1/1:3,11:15:27.09:704,27,0	1/1:3,17:20:54.19:1380,54,0	1/1:2,17:19:51.18:1292,51,0	1/1:4,26:30:78.27:2008,78,0	1/1:3,22:25:63.22:1648,63,0	1/1:3,14:17:42.14:1069,42,0	0/0:26,0:26:75.26:0,75,1355	0/0:29,0:29:81.28:0,81,1435	1/1:12,16:28:63.17:1503,63,0	1/1:2,5:7:12.04:314,12,0	1/1:3,17:21:45.12:1177,45,0	1/1:5,6:12:18.06:468,18,0	1/1:6,11:18:36.12:930,36,0	1/1:3,22:25:54.65:1414,55,0	1/1:5,26:31:81.01:2108,81,0	1/1:5,16:21:51.17:1262,51,0	1/1:5,14:20:36.12:941,36,0	1/1:1,6:7:18.06:472,18,0
chr10	95343253	.	T	TCTC	33021.76	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-11.538;DP=728;FS=0.825;HRun=0;HaplotypeScore=103.0788;InbreedingCoeff=0.9884;MQ=78.70;MQ0=2;MQRankSum=-7.523;QD=53.00;ReadPosRankSum=3.270;VQSLOD=7.2851;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:43:99:2419,105,0	1/1:1,5:6:11.85:275,12,0	0/0:17,0:17:48.12:0,48,759	0/0:23,0:23:66.23:0,66,1121	1/1:5,17:24:32.92:756,33,0	1/1:2,21:24:66.23:1510,66,0	1/1:4,25:29:78.27:1795,78,0	1/1:7,23:31:84.27:1889,84,0	1/1:6,33:41:93.32:2142,93,0	1/1:3,23:28:72.22:1612,72,0	1/1:0,10:10:24.08:553,24,0	1/1:8,30:39:99:2239,99,0	1/1:2,22:25:63.22:1450,63,0	1/1:2,18:20:48.16:1105,48,0	1/1:4,26:30:63.22:1451,63,0	1/1:6,19:27:57.20:1281,57,0	0/0:42,0:42:99:0,123,2098	0/0:23,0:23:66.23:0,66,1119	1/1:2,7:11:33.09:665,33,0	1/1:0,8:8:21.07:469,21,0	1/1:0,78:79:99:3962,174,0	1/1:1,13:15:29.62:690,30,0	1/1:1,8:9:24.08:553,24,0	1/1:3,44:47:86.85:2002,87,0	1/1:2,22:24:63.22:1451,63,0	1/1:6,14:23:57.11:1164,57,0	1/1:5,10:15:39.13:897,39,0	1/1:0,10:10:30.10:692,30,0
chr10	95344357	.	GC	G	3668.56	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.213;DP=652;FS=0.000;HRun=4;HaplotypeScore=63.4776;InbreedingCoeff=0.9982;MQ=80.12;MQ0=0;MQRankSum=-0.297;QD=32.47;ReadPosRankSum=2.656;VQSLOD=4.1850;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,1553	1/1:0,9:9:24.07:288,24,0	0/0:11,0:11:29.99:0,30,371	0/0:20,0:20:34.83:0,35,575	1/1:4,17:21:45.14:537,45,0	0/0:16,0:16:42.12:0,42,570	0/0:35,0:35:99:0,99,1333	0/0:18,0:18:51.16:0,51,698	1/1:0,17:17:45.14:540,45,0	0/0:27,0:27:78.25:0,78,1077	0/0:15,0:15:45.14:0,45,607	0/0:35,0:35:96.28:0,96,1291	0/0:14,0:14:42.13:0,42,568	0/0:24,0:24:72.22:0,72,974	1/1:0,32:32:96.29:1152,96,0	1/1:0,16:16:48.15:576,48,0	0/0:35,0:35:99:0,105,1467	0/0:39,0:39:99:0,114,1533	0/0:18,0:18:51.17:0,51,710	0/0:9,0:9:21.06:0,21,276	0/0:67,0:67:99:0,190,2555	0/0:18,0:18:51.15:0,51,677	0/0:17,0:17:48.09:0,48,614	0/0:31,0:31:90.28:0,90,1226	1/1:1,17:18:48.15:576,48,0	0/0:25,0:25:75.22:0,75,1008	0/0:13,0:13:36.12:0,36,503	0/0:9,0:9:24.08:0,24,336
chr10	95346031	.	GCACACACACA	G	2977.25	PASS	AB=0.833;AC=19;AF=0.352;AN=54;BaseQRankSum=5.521;DP=657;FS=3.979;HRun=0;HaplotypeScore=190.3571;InbreedingCoeff=0.6740;MQ=53.04;MQ0=11;MQRankSum=-6.832;QD=14.45;ReadPosRankSum=0.797;VQSLOD=2.8217;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:37:20.61:256,21,0	0/1:8,0:10:16.53:17,0,170	./.	0/0:35,0:14:3.01:0,3,93	0/0:10,0:11:11.68:0,12,312	0/0:10,0:18:7.58:0,8,275	0/0:20,0:27:15.04:0,15,517	0/1:33,0:38:0.13:0,0,0	0/1:12,0:15:36.23:36,0,267	1/1:9,7:17:24.07:457,24,0	1/1:5,4:12:8.87:176,9,0	0/0:21,0:30:18.04:0,18,503	0/0:11,0:26:8.38:0,8,369	0/0:21,0:29:33.10:0,33,966	0/0:14,0:21:29.26:0,29,478	0/0:11,0:23:22.31:0,22,595	0/0:20,0:24:51.18:0,51,1865	0/0:24,0:27:57.20:0,57,2287	1/1:10,4:14:15.03:361,15,0	1/1:6,7:16:21.06:543,21,0	0/0:55,14:66:2.82:0,3,42	0/0:12,0:18:13.39:0,13,281	0/0:3,0:10:0.47:0,0,1	0/0:11,0:27:12.25:0,12,596	0/0:13,0:13:9.03:0,9,169	1/1:14,5:19:15.02:380,15,0	1/1:5,6:12:15.05:447,15,0	1/1:2,0:12:22.89:493,23,0
chr10	95346758	.	GCATCCACT	G	3124.53	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.445;DP=759;FS=2.906;HRun=0;HaplotypeScore=227.3065;InbreedingCoeff=0.9872;MQ=84.62;MQ0=0;MQRankSum=-9.456;QD=39.55;ReadPosRankSum=-0.725;VQSLOD=3.4499;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,40:47:68.65:1881,69,0	0/0:8,0:8:21.07:0,21,894	0/0:30,0:30:88.54:0,89,3305	0/0:23,0:23:50.68:0,51,2051	0/0:14,0:14:42.14:0,42,1854	0/0:21,0:21:63.20:0,63,2623	0/0:31,0:31:90.27:0,90,3761	1/1:13,13:26:39.12:1044,39,0	0/0:30,0:30:87.30:0,87,3832	0/0:22,0:22:66.23:0,66,2830	0/0:11,0:11:30.10:0,30,1328	0/0:38,0:38:99:0,114,4882	0/0:35,0:35:99:0,102,4398	0/0:34,0:34:99:0,99,4359	0/0:34,0:34:99:0,102,4325	0/0:34,0:34:99:0,99,4250	0/0:36,0:36:99:0,105,4231	0/0:34,0:34:99:0,99,4219	0/0:20,0:20:57.19:0,57,2209	0/0:15,0:15:42.14:0,42,1861	0/0:61,0:61:99:0,172,7318	0/0:20,0:20:57.20:0,57,2493	0/0:22,0:22:66.23:0,66,2917	0/0:43,0:43:99:0,120,4542	0/0:22,0:22:66.23:0,66,2879	0/0:26,0:26:72.25:0,72,3178	0/0:16,0:16:48.15:0,48,1936	1/1:1,5:6:12.04:340,12,0
chr10	95348775	.	T	TA	4909.29	PASS	AB=0.958;AC=18;AF=0.321;AN=56;BaseQRankSum=-13.995;DP=717;FS=11.227;HRun=10;HaplotypeScore=68.7934;InbreedingCoeff=0.9008;MQ=71.13;MQ0=0;MQRankSum=0.073;QD=20.98;ReadPosRankSum=1.098;VQSLOD=5.3065;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:80.90:0,81,665	0/0:8,0:8:23.96:0,24,194	0/0:16,0:16:26.60:0,27,224	0/1:15,0:14:1.05:1,0,85	0/0:37,0:37:95.86:0,96,788	1/1:3,20:23:46.27:565,46,0	1/1:6,19:25:57.14:608,57,0	0/0:30,0:30:51.40:0,51,582	0/0:27,0:27:71.89:0,72,588	0/0:41,0:41:98.83:0,99,806	0/0:31,0:31:80.86:0,81,658	1/1:3,17:20:36.09:384,36,0	1/1:3,21:24:60.15:639,60,0	1/1:4,22:26:57.10:596,57,0	0/0:27,0:27:77.90:0,78,638	0/0:24,0:24:59.92:0,60,493	0/0:18,0:18:47.91:0,48,389	0/0:24,0:24:62.87:0,63,508	0/0:16,0:16:44.94:0,45,369	0/0:30,0:31:50.10:0,50,520	0/1:10,1:11:2.02:2,0,192	1/1:4,19:23:48.06:498,48,0	1/1:5,29:34:75.14:785,75,0	1/1:1,31:32:78.20:832,78,0	0/0:20,0:20:50.89:0,51,414	0/0:36,0:36:89.85:0,90,734	0/0:34,0:34:89.87:0,90,738	0/0:32,0:32:86.87:0,87,714
chr10	95349252	.	AGAG	A	5655.34	PASS	AB=0.682;AC=20;AF=0.357;AN=56;BaseQRankSum=9.010;DP=543;FS=0.381;HRun=0;HaplotypeScore=124.5320;InbreedingCoeff=0.8310;MQ=58.42;MQ0=4;MQRankSum=-8.180;QD=27.86;ReadPosRankSum=1.396;VQSLOD=5.1692;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,27:34:30.73:749,31,0	0/0:13,0:13:24.08:0,24,471	0/0:20,0:6:8.39:0,8,122	0/0:20,0:12:11.97:0,12,158	0/0:23,0:23:60.19:0,60,1164	1/1:11,9:20:39.10:508,39,0	1/1:4,8:12:27.08:371,27,0	0/1:9,4:12:19.87:179,0,20	0/0:17,0:17:39.13:0,39,782	0/0:19,0:19:42.07:0,42,772	0/0:13,0:13:24.04:0,24,434	1/1:1,9:10:27.08:371,27,0	1/1:7,15:22:51.16:715,51,0	1/1:7,21:28:72.22:975,72,0	0/0:15,0:15:33.11:0,33,670	0/0:24,0:23:51.14:0,51,937	0/0:28,0:28:66.06:0,66,1199	0/0:21,0:21:45.15:0,45,905	0/0:23,0:23:65.69:0,66,1164	0/0:19,0:19:39.13:0,39,780	0/0:18,0:18:30.36:0,30,774	1/1:2,9:11:33.09:453,33,0	1/1:7,7:14:32.88:403,33,0	1/1:9,9:18:36.10:491,36,0	0/0:26,1:27:34.94:0,35,1403	0/0:21,0:21:57.16:0,57,1020	0/0:19,0:19:39.12:0,39,758	0/1:7,14:20:20.08:438,0,20
chr10	95349287	.	AG	A	1338.81	PASS	AB=0.895;AC=20;AF=0.357;AN=56;BaseQRankSum=12.710;DP=597;FS=1.195;HRun=1;HaplotypeScore=164.6904;InbreedingCoeff=0.4141;MQ=50.99;MQ0=8;MQRankSum=-11.693;QD=4.87;ReadPosRankSum=-0.315;VQSLOD=0.0547;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:16.17:0,16,296	0/0:5,0:5:14.03:0,14,71	0/1:40,1:11:2.74:3,0,273	0/0:32,0:8:9.84:0,10,183	0/0:22,0:22:61.67:0,62,333	1/1:5,11:16:20.86:183,21,0	1/1:3,13:16:17.35:176,17,0	0/1:20,0:19:2.49:2,0,165	0/0:16,0:16:43.95:0,44,201	0/1:15,0:15:16.40:16,0,100	0/1:16,0:16:7.89:8,0,144	0/1:5,12:17:7:152,0,7	1/1:5,20:25:10.23:312,10,0	1/1:5,20:25:32.49:316,32,0	0/0:21,0:21:29.98:0,30,206	0/0:23,0:23:58.25:0,58,263	0/0:30,0:30:87.16:0,87,1317	0/0:23,0:23:68.97:0,69,1038	0/0:26,0:26:43.72:0,44,298	0/0:16,0:16:17.68:0,18,168	0/0:28,0:28:72.22:0,72,376	1/1:3,15:18:18.18:202,18,0	0/1:3,6:9:15.95:46,0,16	1/1:9,6:15:6.41:75,6,0	0/0:29,0:29:78.37:0,78,345	0/1:25,0:25:14.50:14,0,170	0/0:18,0:18:45.66:0,46,218	0/1:17,0:17:18.94:19,0,163
chr10	95349290	.	AAG	A	1626.71	PASS	AB=0.625;AC=15;AF=0.268;AN=56;BaseQRankSum=14.658;DP=605;FS=0.393;HRun=0;HaplotypeScore=176.5551;InbreedingCoeff=0.8467;MQ=50.92;MQ0=8;MQRankSum=-11.835;QD=11.38;ReadPosRankSum=3.457;VQSLOD=2.9848;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:86.34:0,86,1395	0/0:5,0:5:15.05:0,15,273	0/0:39,1:10:21.35:0,21,433	0/0:33,0:10:9.88:0,10,190	0/0:23,0:23:68.95:0,69,1144	1/1:4,11:16:23.05:209,23,0	1/1:3,13:16:19.28:219,19,0	0/0:21,0:20:54.06:0,54,885	0/0:16,0:16:48.16:0,48,890	0/0:15,0:15:45.15:0,45,798	0/0:16,0:16:45.08:0,45,744	1/1:6,12:18:3.54:196,4,0	1/1:4,21:25:17.93:411,18,0	1/1:5,20:25:22.44:375,22,0	0/0:21,0:21:63.20:0,63,1161	0/0:23,0:23:65.95:0,66,1192	0/0:31,0:31:87.12:0,87,1537	0/0:23,0:23:69.23:0,69,1263	0/0:27,0:27:80.75:0,81,1311	0/0:16,0:16:45.15:0,45,825	0/0:28,0:29:77.62:0,78,1545	1/1:3,15:18:10.47:220,10,0	0/1:4,6:10:21.44:79,0,21	1/1:9,6:15:9.33:106,9,0	0/0:31,0:31:93.32:0,93,1717	0/0:23,0:23:66.05:0,66,1204	0/0:18,0:18:51.04:0,51,953	0/0:17,0:17:51.07:0,51,870
chr10	95349318	.	AAGG	A	3102.15	PASS	AB=0.804;AC=18;AF=0.321;AN=56;BaseQRankSum=9.293;DP=600;FS=3.080;HRun=0;HaplotypeScore=172.0576;InbreedingCoeff=0.7664;MQ=50.28;MQ0=8;MQRankSum=-8.168;QD=16.68;ReadPosRankSum=-1.368;VQSLOD=3.4834;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:68.58:0,69,1180	0/0:5,0:5:6.02:0,6,123	0/0:36,0:5:3.01:0,3,59	0/0:37,0:12:5.10:0,5,229	0/0:19,0:19:42.10:0,42,753	1/1:13,0:13:18.03:185,18,0	1/1:22,0:22:12.96:261,13,0	0/1:10,18:27:69.85:682,0,70	0/0:19,0:19:48.16:0,48,963	0/0:16,0:16:36.10:0,36,641	0/0:14,0:14:12.97:0,13,529	1/1:22,0:22:48.20:476,48,0	1/1:28,0:28:42.08:399,42,0	1/1:20,0:20:15.93:273,16,0	0/0:20,0:20:45.07:0,45,846	0/0:20,0:20:33.03:0,33,794	0/0:28,0:28:81.23:0,81,1662	0/0:19,0:19:51.15:0,51,1010	0/0:30,0:28:52.01:0,52,855	0/0:18,0:18:36.37:0,36,638	0/0:34,0:34:84.29:0,84,1653	1/1:21,0:21:39.82:381,40,0	1/1:10,0:10:21.04:224,21,0	0/1:12,0:12:20.88:107,0,21	0/0:22,0:22:40.49:0,40,638	0/0:24,0:24:60.15:0,60,1117	0/0:19,0:19:45.11:0,45,793	1/1:4,6:10:24.01:317,24,0
chr10	95349326	.	GGAA	G	5581.71	PASS	AB=0.996;AC=30;AF=0.536;AN=56;BaseQRankSum=5.778;DP=578;FS=5.508;HRun=0;HaplotypeScore=152.6939;InbreedingCoeff=0.0648;MQ=52.25;MQ0=5;MQRankSum=-6.521;QD=14.10;ReadPosRankSum=-8.541;VQSLOD=2.2667;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:99:115,0,566	0/1:5,0:5:36.94:37,0,57	0/0:27,0:1:3:0,3,29	0/0:36,0:10:3.38:0,3,235	0/1:15,0:15:7.86:8,0,377	1/1:2,12:14:21.02:324,21,0	1/1:5,19:24:36.87:568,37,0	0/1:25,0:24:99:282,0,143	0/0:19,0:19:2.47:0,2,517	0/1:17,0:17:70.48:70,0,273	0/1:14,0:14:44.39:44,0,240	1/1:3,18:21:56.99:867,57,0	1/1:6,19:25:62.68:803,63,0	1/1:4,14:18:41.47:556,41,0	0/1:18,0:18:23.07:23,0,413	0/1:19,0:19:67.85:68,0,404	0/0:31,0:31:84.22:0,84,1730	0/0:20,0:20:41.64:0,42,938	0/1:31,0:29:99:186,0,348	0/1:20,1:21:43.99:44,0,296	0/0:31,0:31:46.17:0,46,900	1/1:5,17:22:53.85:726,54,0	1/1:0,12:12:23.90:374,24,0	1/1:5,8:13:17.94:241,18,0	0/1:17,0:17:40.17:40,0,276	0/1:25,0:25:63.32:63,0,512	0/0:17,0:17:13.05:0,13,415	1/1:8,0:8:17.91:141,18,0
chr10	95350048	.	AC	A	6799.20	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=2.500;DP=516;FS=27.682;HRun=4;HaplotypeScore=85.0139;InbreedingCoeff=0.9908;MQ=78.55;MQ0=0;MQRankSum=-1.944;QD=33.33;ReadPosRankSum=1.134;VQSLOD=2.8263;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:84.26:1041,84,0	0/0:4,0:4:9.03:0,9,130	0/0:28,0:27:60.48:0,60,895	0/0:36,0:32:50.31:0,50,944	0/0:23,0:23:63.21:0,63,906	1/1:1,15:16:45.14:564,45,0	1/1:0,27:27:78.25:967,78,0	1/1:2,22:24:66.19:805,66,0	0/0:17,0:17:45.15:0,45,648	0/0:13,0:13:35.63:0,36,513	0/0:14,0:14:39.13:0,39,552	1/1:2,12:14:42.13:516,42,0	1/1:2,13:15:41.72:494,42,0	1/1:2,10:12:29.92:340,30,0	0/0:9,0:9:24.08:0,24,345	0/0:19,0:19:57.19:0,57,820	0/0:24,0:24:72.17:0,72,961	0/0:16,0:16:48.16:0,48,691	0/0:18,0:18:51.17:0,51,722	0/0:12,0:12:30.10:0,30,428	0/0:18,0:18:51.16:0,51,707	1/1:1,11:12:27.06:334,27,0	1/1:1,17:18:54.17:669,54,0	1/1:3,20:23:63.09:772,63,0	0/0:18,0:17:48.14:0,48,656	0/0:24,0:24:72.24:0,72,1034	0/0:19,0:19:54.18:0,54,773	1/1:0,8:8:24.08:297,24,0
chr10	95350098	.	T	TAC	4198.23	PASS	AB=0.738;AC=21;AF=0.375;AN=56;BaseQRankSum=-7.808;DP=576;FS=2.691;HRun=0;HaplotypeScore=123.2956;InbreedingCoeff=0.4057;MQ=54.42;MQ0=8;MQRankSum=1.800;QD=14.68;ReadPosRankSum=-1.921;VQSLOD=3.4805;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,4:37:17.96:539,0,18	1/1:4,0:5:5.87:42,6,0	0/0:30,0:12:2.34:0,2,9	0/1:32,0:13:0:0,0,0	0/1:9,5:15:2.07:128,0,2	0/0:15,0:24:40.32:0,40,195	0/0:25,0:40:53.38:0,53,299	0/0:29,0:29:7.64:0,8,70	1/1:7,10:18:15.03:209,15,0	0/1:8,12:22:3.81:444,0,4	0/1:6,6:13:29.07:40,0,29	0/0:9,0:19:31.09:0,31,151	0/0:8,0:15:23.75:0,24,106	0/0:8,0:12:14.71:0,15,64	0/1:8,10:18:8.02:302,0,8	1/1:15,5:20:9.34:453,9,0	0/0:29,0:30:33.15:0,33,512	0/0:24,0:24:49.73:0,50,496	0/1:7,5:11:12.74:138,0,13	0/1:10,4:14:3.51:253,0,4	1/1:18,8:26:52.98:625,53,0	0/0:8,0:14:24.86:0,25,121	0/0:11,0:17:22.21:0,22,100	0/0:21,0:27:29.09:0,29,177	1/1:3,10:13:18.06:280,18,0	1/1:5,12:17:33.09:485,33,0	0/1:6,17:24:13.11:259,0,13	0/0:8,0:8:17.86:0,18,132
chr10	95350239	.	C	CCAGT	17389.37	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=6.346;DP=580;FS=0.000;HRun=0;HaplotypeScore=104.8699;InbreedingCoeff=0.9953;MQ=84.32;MQ0=0;MQRankSum=-8.766;QD=74.63;ReadPosRankSum=0.487;VQSLOD=6.8057;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,2056	1/1:2,11:14:33.11:927,33,0	0/0:15,0:15:42.14:0,42,848	0/0:28,0:28:68.25:0,68,1337	1/1:0,17:19:48.16:1323,48,0	0/0:20,0:20:54.17:0,54,1093	0/0:34,0:34:96.28:0,96,1870	0/0:20,0:20:60.18:0,60,1153	1/1:2,13:17:39.13:1098,39,0	1/1:1,14:15:45.15:1285,45,0	1/1:0,4:5:11.73:329,12,0	0/0:19,0:19:57.18:0,57,1144	0/0:17,0:17:51.16:0,51,1013	0/0:15,0:15:45.15:0,45,943	1/1:2,18:20:51.18:1462,51,0	1/1:0,22:22:60.21:1736,60,0	0/0:38,0:38:99:0,114,2376	0/0:23,0:23:63.22:0,63,1303	1/1:1,10:12:33.11:905,33,0	1/1:0,16:17:48.16:1337,48,0	1/1:1,21:25:60.21:1722,60,0	0/0:25,0:25:75.22:0,75,1444	0/0:17,0:17:51.16:0,51,1016	0/0:30,0:30:87.24:0,87,1709	1/1:2,17:20:48.16:1361,48,0	1/1:0,23:24:72.23:2022,72,0	1/1:2,21:23:66.23:1881,66,0	0/0:10,0:10:30.10:0,30,629
chr10	95350479	.	T	TG	8048.37	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-5.632;DP=517;FS=1.542;HRun=4;HaplotypeScore=81.2664;InbreedingCoeff=0.9606;MQ=80.17;MQ0=0;MQRankSum=-5.590;QD=33.53;ReadPosRankSum=0.687;VQSLOD=5.3193;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,29:32:75.25:1026,75,0	1/1:0,2:2:6.02:82,6,0	0/0:22,0:22:51.03:0,51,552	0/0:21,0:21:55.50:0,56,566	1/1:0,8:8:21.07:287,21,0	0/0:11,0:11:33.09:0,33,374	0/0:36,0:36:99:0,102,1146	1/1:3,22:25:57.17:761,57,0	1/1:1,14:15:36.11:492,36,0	1/1:1,9:10:27.09:369,27,0	1/1:1,3:4:9.03:123,9,0	0/0:24,0:24:63.18:0,63,714	0/0:20,0:20:57.15:0,57,635	0/0:15,0:15:39.11:0,39,442	1/1:2,6:8:18.06:246,18,0	1/1:0,19:19:48.16:656,48,0	0/0:30,0:30:82.78:0,83,922	0/0:23,0:23:55.40:0,55,615	1/1:4,10:14:33.08:430,33,0	1/1:0,9:9:27.09:369,27,0	1/1:7,48:55:99:1682,123,0	0/0:15,0:15:45.13:0,45,510	0/0:10,0:10:30.09:0,30,340	0/0:50,0:50:99:0,129,1430	1/1:0,11:11:30.10:410,30,0	1/1:0,12:12:36.12:492,36,0	1/1:0,14:14:42.14:574,42,0	1/1:2,0:2:5.99:48,6,0
chr10	95350911	.	GT	G	11483.73	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=19.028;DP=642;FS=16.545;HRun=2;HaplotypeScore=100.9183;InbreedingCoeff=0.9895;MQ=62.61;MQ0=1;MQRankSum=-4.088;QD=35.23;ReadPosRankSum=2.062;VQSLOD=3.2271;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1622	1/1:0,5:5:15.05:195,15,0	0/0:15,0:14:39.10:0,39,513	0/0:28,0:26:60.04:0,60,892	1/1:1,23:24:63.16:798,63,0	0/0:22,0:22:60.20:0,60,899	0/0:39,0:39:99:0,117,1690	1/1:1,25:26:60.19:775,60,0	1/1:3,26:29:84.13:1020,84,0	1/1:0,28:29:87.27:1113,87,0	1/1:0,13:13:38.71:475,39,0	0/0:26,0:26:69.23:0,69,1034	0/0:23,0:23:66.22:0,66,986	0/0:21,0:21:63.21:0,63,944	1/1:1,36:37:99:1343,105,0	1/1:1,30:31:89.45:1116,89,0	0/0:39,0:39:99:0,117,1705	0/0:14,0:14:36.12:0,36,539	1/1:0,11:11:24.08:311,24,0	1/1:0,19:19:57.08:695,57,0	1/1:1,38:39:99:1441,111,0	0/0:16,0:16:42.14:0,42,629	0/0:13,0:13:36.10:0,36,516	0/0:22,0:22:66.22:0,66,989	1/1:0,17:17:48.15:617,48,0	1/1:2,12:14:36.12:468,36,0	1/1:0,27:27:78.25:1009,78,0	1/1:0,5:5:9.03:107,9,0
chr10	95351061	.	CAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	C	6580.16	PASS	AC=24;AF=0.444;AN=54;BaseQRankSum=7.121;DP=627;FS=28.878;HRun=0;HaplotypeScore=410.8967;InbreedingCoeff=0.8605;MQ=63.08;MQ0=5;MQRankSum=-4.599;QD=24.74;ReadPosRankSum=-0.183;VQSLOD=1.9468;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:26:54.19:0,54,3035	1/1:11,4:15:3.01:245,3,0	0/0:29,0:21:15.94:0,16,325	0/0:39,0:22:24:0,24,675	1/1:19,10:29:9.03:545,9,0	0/0:18,0:18:21.07:0,21,1934	0/0:34,0:33:47.45:0,47,3711	0/0:32,0:31:35.33:0,35,2055	1/1:13,9:22:12.04:980,12,0	1/1:21,0:21:6.01:84,6,0	./.	0/0:14,0:14:14.39:0,14,912	0/0:17,0:17:23.67:0,24,2549	0/0:23,0:23:39.13:0,39,3445	1/1:20,11:31:9.03:735,9,0	1/1:18,16:34:18.06:1448,18,0	0/0:22,0:27:51.17:0,51,4611	0/0:20,0:20:45.15:0,45,3611	1/1:19,0:18:10.72:167,11,0	1/1:11,5:16:8.20:682,8,0	1/1:20,0:20:6.96:93,7,0	0/0:20,0:20:21.58:0,22,1017	0/0:8,0:8:9.03:0,9,426	0/0:20,0:20:36.12:0,36,3686	1/1:6,9:16:9.03:713,9,0	1/1:9,7:16:17.92:402,18,0	1/1:16,10:26:3.62:486,4,0	0/0:24,0:24:54.17:0,54,4369
chr10	95352728	.	TACACACACACACACACACACACAC	T	1524.95	PASS	AB=0.729;AC=13;AF=0.241;AN=54;BaseQRankSum=6.391;DP=623;FS=1.956;HRun=0;HaplotypeScore=335.7904;InbreedingCoeff=0.3256;MQ=57.67;MQ0=14;MQRankSum=-1.351;QD=7.40;ReadPosRankSum=0.490;VQSLOD=1.5959;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:24:0,24,478	0/0:11,0:11:3.01:0,3,103	./.	0/0:18,0:14:0:0,0,0	1/1:14,0:13:1.82:5,2,0	0/0:12,0:12:15.03:0,15,710	0/0:31,0:31:24.08:0,24,1956	0/0:20,0:18:20.02:0,20,325	1/1:9,16:25:3.60:189,4,0	0/1:15,14:28:10.70:305,0,11	1/1:9,0:9:5.96:45,6,0	0/0:28,0:27:15.04:0,15,754	0/0:20,0:20:18.04:0,18,1288	0/0:19,0:19:6.60:0,7,833	1/1:20,13:32:3.01:176,3,0	0/1:12,13:25:0.84:547,0,1	0/0:33,0:33:63.82:0,64,4698	0/0:23,0:23:37.99:0,38,1645	0/0:20,0:19:14.17:0,14,116	0/0:7,0:17:7.92:0,8,35	0/0:41,0:38:23.88:0,24,230	0/0:16,0:15:21.07:0,21,1893	0/0:10,0:10:6:0,6,323	0/0:33,0:33:51.08:0,51,3873	0/1:10,13:23:22.94:178,0,23	0/1:19,0:19:99:104,0,138	0/1:15,0:28:39.09:118,0,39	0/0:6,0:6:13.76:0,14,1012
chr10	95353958	.	GATAC	G	14380.47	PASS	AB=0.510;AC=25;AF=0.446;AN=56;BaseQRankSum=16.550;DP=677;FS=3.374;HRun=0;HaplotypeScore=115.5091;InbreedingCoeff=0.9484;MQ=80.86;MQ0=2;MQRankSum=-4.717;QD=44.38;ReadPosRankSum=5.180;VQSLOD=5.3695;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:99:0,114,2913	1/1:1,12:13:30.10:551,30,0	0/0:17,0:17:48.16:0,48,1190	0/0:19,0:19:57.20:0,57,1378	1/1:1,24:26:63.13:1087,63,0	0/0:30,0:30:90.31:0,90,2376	0/0:15,0:15:42.14:0,42,1036	0/0:36,0:36:99:0,99,2555	1/1:0,22:22:57.20:1048,57,0	1/1:2,29:31:87.30:1589,87,0	1/1:3,19:22:54.19:991,54,0	0/0:24,0:24:69.24:0,69,1774	0/0:17,0:17:51.18:0,51,1347	0/0:30,0:30:78.25:0,78,2004	1/1:0,29:28:66.23:1214,66,0	1/1:3,26:29:63.22:1158,63,0	0/0:22,0:22:63.22:0,63,1632	0/0:18,0:18:54.19:0,54,1412	1/1:4,20:24:63.16:1053,63,0	1/1:0,34:34:96.24:1695,96,0	1/1:1,20:21:45.15:828,45,0	0/0:17,0:17:45.15:0,45,1157	0/0:19,0:19:57.20:0,57,1474	0/0:29,0:29:87.25:0,87,2151	1/1:0,16:16:39.13:717,39,0	0/1:1,25:26:3.99:1235,0,4	1/1:2,29:30:66.23:1213,66,0	0/0:14,0:14:42.14:0,42,1098
chr10	95354422	.	CGTAT	C	795.99	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=6.309;DP=841;FS=12.471;HRun=0;HaplotypeScore=133.6481;InbreedingCoeff=0.6156;MQ=71.30;MQ0=6;MQRankSum=-1.490;QD=18.51;ReadPosRankSum=0.124;VQSLOD=2.9287;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,21:43:57.19:890,57,0	0/0:12,0:12:9.03:0,9,212	./.	./.	0/0:25,0:25:33.11:0,33,752	0/0:31,0:31:60.17:0,60,1317	0/0:27,0:27:30.07:0,30,610	0/0:56,0:56:18.23:0,18,745	0/0:20,0:20:42.10:0,42,824	0/0:33,0:33:42.14:0,42,949	0/0:28,0:28:54.17:0,54,1216	0/0:30,0:30:63.18:0,63,1369	0/0:24,0:24:42.08:0,42,891	0/0:32,1:33:1.33:0,1,1000	0/0:36,0:36:75.26:0,75,1742	0/0:26,0:26:51.16:0,51,1156	0/0:29,0:29:45.09:0,45,956	0/0:28,0:28:51.11:0,51,1035	0/0:21,0:20:5.75:0,6,83	0/0:27,1:28:13.39:0,13,1272	0/0:56,0:56:99:0,117,2684	0/0:39,0:39:54.19:0,54,1237	0/0:23,0:23:41.72:0,42,866	0/0:26,0:26:24.08:0,24,539	0/0:14,0:14:21.07:0,21,460	0/0:32,1:33:4.36:0,4,1083	0/0:34,1:35:13.37:0,13,1264	0/0:21,0:21:27.09:0,27,637
chr10	95354787	.	G	GA	7258.94	PASS	AB=0.800;AC=27;AF=0.482;AN=56;BaseQRankSum=-6.779;DP=416;FS=2.239;HRun=6;HaplotypeScore=41.9041;InbreedingCoeff=0.8999;MQ=63.39;MQ0=0;MQRankSum=1.415;QD=31.98;ReadPosRankSum=0.965;VQSLOD=4.9893;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.14:0,75,757	1/1:2,8:10:24.08:302,24,0	0/0:5,0:4:6.01:0,6,61	0/1:3,0:4:0.62:1,0,53	1/1:4,29:33:84.26:1045,84,0	0/0:16,0:16:48.11:0,48,490	0/0:10,0:10:24.05:0,24,245	0/0:32,0:32:87.18:0,87,882	1/1:0,5:5:15.05:189,15,0	1/1:3,19:22:57.18:717,57,0	1/1:2,25:27:75.24:944,75,0	0/0:4,0:4:9.02:0,9,92	0/0:7,0:7:15.03:0,15,153	0/0:6,0:6:15.03:0,15,153	1/1:2,9:11:21.07:264,21,0	1/1:1,6:7:18.06:226,18,0	0/0:29,0:29:81.10:0,81,801	0/0:23,0:23:63.12:0,63,634	1/1:0,20:20:60.18:741,60,0	1/1:2,13:15:36.12:453,36,0	1/1:3,6:9:18.06:226,18,0	0/0:2,0:2:6.01:0,6,61	0/0:8,0:8:18.04:0,18,184	0/0:2,0:2:6.01:0,6,61	1/1:1,21:22:63.20:793,63,0	1/1:2,18:20:54.17:679,54,0	1/1:1,21:22:54.17:679,54,0	0/0:18,0:18:54.12:0,54,551
chr10	95355403	.	CGTGT	C	5019.62	PASS	AB=0.938;AC=17;AF=0.315;AN=54;BaseQRankSum=-0.178;DP=711;FS=7.599;HRun=0;HaplotypeScore=166.7630;InbreedingCoeff=-0.0237;MQ=67.72;MQ0=7;MQRankSum=-1.467;QD=13.90;ReadPosRankSum=3.928;VQSLOD=3.7250;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:27:1.29:296,1,0	0/1:10,0:10:23.87:82,0,24	0/0:23,0:14:0.66:0,1,9	0/0:18,0:11:2.04:0,2,6	0/0:8,0:8:0:0,0,0	0/0:16,0:15:36.09:0,36,620	0/0:29,0:29:63.66:0,64,1091	1/1:28,0:27:50.77:649,51,0	0/1:31,0:31:48.39:592,0,48	0/1:21,3:23:39.38:604,0,39	0/1:11,2:13:13.28:152,0,13	0/0:34,0:34:72.21:0,72,1333	0/0:36,0:36:74.89:0,75,1481	0/0:29,0:29:68.81:0,69,1263	0/1:28,0:27:4.38:4,0,60	1/1:26,0:26:5.78:586,6,0	0/0:31,0:32:77.48:0,77,1425	0/0:30,0:30:74.74:0,75,1335	0/1:18,0:18:75.94:270,0,76	0/1:20,3:22:41.14:52,0,41	0/1:65,0:63:99:651,0,176	0/0:23,0:23:45.15:0,45,938	0/0:11,0:13:30.09:0,30,608	0/0:44,0:44:99:0,102,1967	./.	0/1:21,5:26:73.05:528,0,73	0/1:24,6:31:17.65:534,0,18	0/1:10,0:9:19.31:19,0,139
chr10	95355408	.	G	GTGTGTGTGTA	5056.34	PASS	AB=0.850;AC=24;AF=0.429;AN=56;BaseQRankSum=6.704;DP=750;FS=7.768;HRun=0;HaplotypeScore=258.5275;InbreedingCoeff=0.5329;MQ=61.07;MQ0=11;MQRankSum=-2.924;QD=13.03;ReadPosRankSum=1.542;VQSLOD=2.5382;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:27:12.46:233,12,0	0/1:12,0:12:20.83:72,0,21	0/0:18,0:9:0.50:0,1,9	0/0:16,0:8:2.04:0,2,6	0/1:2,7:14:0:0,0,0	0/0:17,0:16:45.10:0,45,829	0/0:33,0:33:65.50:0,65,1402	1/1:27,0:26:9.45:404,9,0	0/1:39,0:38:43.71:655,0,44	1/1:27,0:24:19.03:478,19,0	1/1:13,0:13:13.27:159,13,0	0/0:34,0:33:75.93:0,76,1754	0/0:38,0:38:95.99:0,96,1821	0/0:27,0:27:68.79:0,69,1468	1/1:31,0:30:8.71:125,9,0	1/1:26,0:26:53.99:609,54,0	0/0:36,0:36:70.78:0,71,1926	0/0:30,0:30:81.18:0,81,1771	1/1:16,0:15:31.37:349,31,0	0/0:26,0:25:4.10:0,4,48	0/1:67,0:65:74.89:542,0,75	0/0:25,0:25:48.60:0,49,1039	0/0:16,0:16:34.63:0,35,685	0/0:46,0:45:99:0,108,2492	0/1:4,11:18:0:0,0,0	1/1:28,0:28:25.49:490,25,0	0/1:32,0:31:20.44:396,0,20	1/1:10,0:9:1.83:544,2,0
chr10	95355414	.	G	GTGTA	5611.87	PASS	AB=0.951;AC=22;AF=0.393;AN=56;BaseQRankSum=9.038;DP=755;FS=8.023;HRun=0;HaplotypeScore=179.0471;InbreedingCoeff=0.3920;MQ=56.90;MQ0=15;MQRankSum=-1.927;QD=13.99;ReadPosRankSum=2.231;VQSLOD=3.9880;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:29:26.80:194,0,27	0/1:11,0:11:23.76:57,0,24	0/0:14,0:5:0.66:0,1,9	0/0:12,0:4:2.04:0,2,6	0/1:13,0:13:0:0,0,0	0/0:19,0:18:51.09:0,51,757	0/0:35,0:35:71.71:0,72,1153	0/1:33,0:30:74.64:353,0,75	0/1:39,0:38:84.71:445,0,85	1/1:27,0:24:62.68:790,63,0	1/1:13,0:13:15.01:175,15,0	0/0:37,0:35:87.16:0,87,1407	0/0:34,0:34:96.02:0,96,1434	0/0:28,0:28:71.95:0,72,1225	0/1:30,0:28:15.91:65,0,16	1/1:25,0:25:51.11:449,51,0	0/0:33,0:33:89.85:0,90,1370	0/0:33,0:33:87.70:0,88,1330	1/1:18,0:17:15.13:448,15,0	0/1:10,15:27:7.06:71,0,7	1/1:63,0:65:67.11:799,67,0	0/0:26,0:26:59.83:0,60,920	0/0:17,0:16:39.54:0,40,598	0/0:49,0:48:99:0,112,1821	0/0:17,0:17:3:0,3,25	1/1:28,0:28:53.65:988,54,0	1/1:29,0:28:59.66:722,60,0	0/1:10,0:9:54.68:55,0,80
chr10	95355416	.	G	GTA	3557.19	PASS	AB=0.931;AC=21;AF=0.375;AN=56;BaseQRankSum=9.476;DP=752;FS=13.341;HRun=0;HaplotypeScore=163.1053;InbreedingCoeff=0.2500;MQ=56.07;MQ0=16;MQRankSum=-2.194;QD=9.03;ReadPosRankSum=3.397;VQSLOD=2.8021;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:30:14.06:162,0,14	0/1:11,0:11:40.51:41,0,53	0/0:13,0:4:0.65:0,1,9	0/0:11,0:3:2.04:0,2,6	0/1:13,0:13:0:0,0,0	0/0:20,0:19:51.09:0,51,676	0/0:35,0:35:72.01:0,72,1004	0/1:34,0:30:56.11:325,0,56	0/1:38,0:37:85.58:400,0,86	1/1:21,4:22:6.03:375,6,0	1/1:11,2:13:14.58:102,15,0	0/0:37,0:35:86.95:0,87,1165	0/0:36,0:36:98.99:0,99,1237	0/0:30,0:30:77.97:0,78,1066	0/1:12,17:27:31.10:38,0,31	1/1:26,0:26:50.08:376,50,0	0/0:33,0:33:89.83:0,90,1144	0/0:32,0:32:88:0,88,1148	0/1:16,1:16:17.03:239,0,17	0/1:23,3:25:13.12:103,0,13	1/1:62,3:63:1.34:480,1,0	0/0:27,0:27:62.31:0,62,789	0/0:18,0:17:15.98:0,16,480	0/0:49,0:48:93.89:0,94,1496	0/0:17,0:17:3:0,3,25	1/1:23,5:28:25.36:472,25,0	1/1:24,4:27:27.36:414,27,0	0/1:9,1:9:29.86:30,0,76
chr10	95355420	.	GTA	G	3696.77	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=12.684;DP=757;FS=3.947;HRun=0;HaplotypeScore=161.6864;InbreedingCoeff=0.6521;MQ=54.17;MQ0=19;MQRankSum=-2.764;QD=8.82;ReadPosRankSum=-2.867;VQSLOD=2.9304;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,6:29:38.90:365,39,0	0/1:12,0:12:28.28:68,0,28	0/0:10,0:3:0.47:0,0,1	0/0:9,0:2:2.04:0,2,6	0/1:16,0:16:0:0,0,0	0/0:20,0:19:53.07:0,53,623	0/0:36,0:36:76.70:0,77,896	1/1:39,0:36:35.25:508,35,0	1/1:38,0:37:58.88:443,59,0	1/1:28,0:25:52.98:399,53,0	1/1:13,0:13:14.95:120,15,0	0/0:36,0:34:70.72:0,71,892	0/0:34,0:34:24.53:0,25,951	0/0:31,0:31:52.46:0,52,912	0/1:26,0:24:2.24:65,0,2	1/1:27,0:26:45.85:328,46,0	0/0:34,0:34:49.26:0,49,1081	0/0:32,0:33:23.92:0,24,836	1/1:18,0:16:1.37:170,1,0	1/1:25,0:24:4.08:32,4,0	1/1:64,0:61:67.66:519,68,0	0/0:26,0:26:48.39:0,48,716	0/0:19,0:18:7.33:0,7,375	0/0:49,0:48:99:0,120,1728	1/1:16,0:16:3:25,3,0	1/1:28,0:28:22.31:298,22,0	1/1:27,1:27:31.86:334,32,0	0/1:10,0:9:25.83:26,0,53
chr10	95355422	.	ATG	A	534.27	PASS	AB=0.936;AC=11;AF=0.220;AN=50;BaseQRankSum=5.138;DP=752;FS=2.792;HRun=0;HaplotypeScore=170.5679;InbreedingCoeff=-0.0346;MQ=51.61;MQ0=20;MQRankSum=-0.556;QD=1.98;ReadPosRankSum=1.272;VQSLOD=2.7363;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:12.67:57,0,13	0/1:12,0:12:7.81:8,0,63	./.	./.	0/1:18,0:18:0:0,0,0	0/0:20,0:19:25.02:0,25,530	0/0:34,3:37:9.24:0,9,641	0/0:36,0:32:6.50:0,7,45	0/0:38,0:37:19.08:0,19,148	0/1:25,3:25:93.30:93,0,94	1/1:10,2:12:5.38:46,5,0	0/0:33,3:34:5.74:0,6,581	0/0:33,0:33:53.72:0,54,725	0/0:31,0:31:39.73:0,40,665	0/0:26,0:24:7.51:0,8,68	0/0:26,0:25:14.61:0,15,92	0/0:34,0:34:41.95:0,42,982	0/1:31,3:34:99:107,0,633	0/1:15,1:14:61.81:62,0,68	0/0:22,3:24:14.68:0,15,76	0/1:63,2:62:40.38:40,0,164	0/0:28,0:28:44.46:0,44,666	0/0:17,0:16:15.47:0,15,369	0/0:51,0:50:99:0,102,1503	./.	0/1:22,5:27:99:107,0,178	0/1:23,5:28:61.37:150,0,61	0/0:10,0:9:17.97:0,18,181
chr10	95355438	.	G	GTA	3230.05	PASS	AB=0.970;AC=15;AF=0.268;AN=56;BaseQRankSum=3.205;DP=809;FS=3.656;HRun=0;HaplotypeScore=163.7385;InbreedingCoeff=0.4384;MQ=48.89;MQ0=29;MQRankSum=-1.948;QD=10.63;ReadPosRankSum=-0.858;VQSLOD=3.4621;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:31:43.88:190,0,44	0/0:10,0:10:14.28:0,14,98	0/0:24,0:4:9.01:0,9,89	0/0:26,0:4:8.95:0,9,79	0/0:21,0:21:8.69:0,9,68	0/0:17,0:16:45.10:0,45,620	0/0:41,0:41:95.90:0,96,1101	0/1:38,0:32:99:223,0,187	0/0:37,0:36:66.95:0,67,498	1/1:24,3:25:16.40:452,16,0	1/1:12,2:13:17.56:158,18,0	0/0:35,0:33:74.89:0,75,896	0/0:30,0:30:84.10:0,84,1031	0/0:22,0:22:56.91:0,57,794	0/0:28,0:26:30.16:0,30,216	0/0:30,0:29:48.84:0,49,366	0/0:34,0:34:89.87:0,90,1199	0/0:32,0:32:86.61:0,87,963	0/1:21,1:17:38.86:237,0,39	1/1:26,1:27:33:367,33,0	0/1:67,3:66:28.40:631,0,28	0/0:29,0:29:68.98:0,69,869	0/0:16,0:15:42.06:0,42,535	0/0:57,0:56:99:0,138,1751	0/0:16,0:16:17.96:0,18,146	1/1:25,4:29:2.09:572,2,0	1/1:27,3:29:4.27:407,4,0	0/1:13,0:14:82.98:166,0,83
chr10	95357470	.	TGTGTGAATACACATG	T	4489.13	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.151;DP=739;FS=9.991;HRun=0;HaplotypeScore=276.9648;InbreedingCoeff=0.9833;MQ=79.50;MQ0=0;MQRankSum=-7.736;QD=31.39;ReadPosRankSum=-1.620;VQSLOD=2.4510;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:48.16:0,48,2927	1/1:6,11:17:9.03:375,9,0	0/0:32,0:31:56.14:0,56,1516	0/0:24,0:24:50.85:0,51,1218	1/1:2,23:25:38.67:532,39,0	0/0:22,0:22:48.15:0,48,2443	0/0:27,0:27:66.19:0,66,3282	0/0:47,0:47:99:0,105,3316	1/1:3,19:22:27.09:986,27,0	0/0:39,0:39:99:0,105,5724	0/0:13,0:13:36.07:0,36,1840	0/0:34,0:34:78.20:0,78,3949	0/0:31,0:31:78.21:0,78,4027	0/0:33,0:33:72.22:0,72,4019	1/1:4,22:26:15.05:530,15,0	1/1:1,29:30:39.13:1353,39,0	0/0:13,0:13:36.07:0,36,1653	0/0:18,0:18:48.09:0,48,2951	0/0:17,0:17:45.03:0,45,1981	0/0:34,0:34:87.29:0,87,5301	0/0:55,0:55:99:0,135,7215	0/0:22,0:22:60.19:0,60,3217	0/0:17,0:17:45.06:0,45,2328	0/0:26,0:26:63.15:0,63,2957	1/1:6,17:23:24.01:714,24,0	0/0:23,0:23:57.09:0,57,3016	0/0:36,0:36:93.31:0,93,4797	0/0:12,0:12:21.07:0,21,1195
chr10	95358706	.	AC	A	5833	PASS	AB=0.895;AC=33;AF=0.589;AN=56;BaseQRankSum=11.080;DP=581;FS=13.037;HRun=9;HaplotypeScore=66.7654;InbreedingCoeff=0.9235;MQ=71.91;MQ0=0;MQRankSum=-1.307;QD=16.25;ReadPosRankSum=-0.003;VQSLOD=3.5961;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:37:61.11:180,61,0	1/1:0,5:5:12.01:110,12,0	0/0:18,0:15:36.07:0,36,389	0/0:19,0:18:24.42:0,24,358	1/1:9,19:28:16.39:404,16,0	0/0:14,0:14:13.87:0,14,340	0/0:25,0:26:72.02:0,72,798	1/1:7,0:37:57.50:169,58,0	1/1:1,17:18:48.03:439,48,0	1/1:3,23:26:72.01:650,72,0	1/1:0,16:16:41.98:376,42,0	0/0:17,0:17:45.10:0,45,489	0/0:14,0:14:33.10:0,33,377	0/0:18,0:18:42.12:0,42,476	1/1:4,16:20:42.02:384,42,0	1/1:1,17:18:45.02:412,45,0	0/0:22,2:24:11.26:0,11,637	0/1:15,2:17:6.80:7,0,427	1/1:6,13:19:35.99:324,36,0	1/1:4,10:14:26.99:247,27,0	1/1:1,33:34:84.04:769,84,0	0/0:15,0:15:36.08:0,36,397	0/0:17,0:17:45.09:0,45,484	0/0:39,1:40:80.88:0,81,1184	1/1:5,15:20:48.02:435,48,0	1/1:1,18:19:50.99:461,51,0	1/1:3,19:22:45.02:412,45,0	1/1:0,0:9:18.33:54,18,0
chr10	95359322	.	CG	C	2132.38	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.923;DP=664;FS=5.396;HRun=4;HaplotypeScore=70.5633;InbreedingCoeff=0.9999;MQ=77.87;MQ0=0;MQRankSum=-3.863;QD=30.46;ReadPosRankSum=-1.203;VQSLOD=3.5367;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:45.14:539,45,0	0/0:12,0:12:36.12:0,36,504	0/0:17,0:17:38.47:0,38,459	0/0:20,0:20:47.71:0,48,570	0/0:30,0:30:90.29:0,90,1232	0/0:31,0:31:81.26:0,81,1116	0/0:21,0:21:54.18:0,54,756	1/1:1,37:38:99:1268,108,0	0/0:23,0:23:66.22:0,66,924	0/0:27,0:27:78.25:0,78,1072	0/0:15,0:15:45.15:0,45,616	0/0:23,0:23:66.22:0,66,919	0/0:21,0:21:63.20:0,63,865	0/0:32,0:32:81.27:0,81,1130	0/0:29,0:29:72.21:0,72,959	0/0:20,0:20:60.20:0,60,840	0/0:37,0:37:99:0,105,1449	0/0:31,0:31:87.29:0,87,1217	0/0:22,0:22:62.93:0,63,821	0/0:21,0:21:63.20:0,63,864	0/0:29,0:29:81.24:0,81,1089	0/0:19,0:19:57.13:0,57,755	0/0:23,0:23:57.17:0,57,765	0/0:22,0:22:63.20:0,63,861	0/0:13,0:13:39.08:0,39,492	0/0:23,0:23:66.21:0,66,908	0/0:33,0:33:99:0,99,1384	1/1:0,13:13:39.12:468,39,0
chr10	95361079	.	C	CTG	1976.38	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=6.536;DP=439;FS=3.096;HRun=0;HaplotypeScore=56.6454;InbreedingCoeff=0.8322;MQ=85.87;MQ0=0;MQRankSum=-5.504;QD=43.92;ReadPosRankSum=-0.896;VQSLOD=4.8676;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:54.18:971,54,0	0/0:2,0:2:3.01:0,3,43	0/0:13,0:13:33.11:0,33,457	0/0:16,0:16:38.69:0,39,537	0/0:5,0:5:6.02:0,6,86	0/0:10,0:10:30.10:0,30,429	0/0:33,0:33:90.29:0,90,1270	1/1:3,13:17:42.10:707,42,0	0/0:16,0:16:48.15:0,48,668	0/0:13,0:13:36.12:0,36,516	0/0:5,0:5:15.05:0,15,210	0/0:26,0:26:75.25:0,75,1074	0/0:15,0:15:42.14:0,42,602	0/0:19,0:19:57.19:0,57,817	0/0:7,0:7:21.07:0,21,301	0/0:22,0:22:66.21:0,66,925	0/0:25,0:25:75.22:0,75,1037	0/0:21,0:21:57.19:0,57,815	0/0:18,0:18:51.16:0,51,699	0/0:3,0:3:9.02:0,9,111	0/0:58,0:58:99:0,172,2408	./.	0/0:2,0:2:3.01:0,3,43	0/0:30,0:30:87.25:0,87,1224	0/0:12,0:12:36.11:0,36,497	0/0:9,0:9:27.09:0,27,387	0/0:13,0:13:39.13:0,39,556	1/1:0,8:8:24.08:439,24,0
chr10	95362731	.	T	TTCTC	2078.02	PASS	AB=0.922;AC=36;AF=0.720;AN=50;BaseQRankSum=0.926;DP=691;FS=3.719;HRun=0;HaplotypeScore=151.3584;InbreedingCoeff=0.3323;MQ=59.32;MQ0=32;MQRankSum=-3.164;QD=3.92;ReadPosRankSum=-3.022;VQSLOD=1.2657;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:36:20.77:0,21,179	1/1:13,0:13:3.01:65,3,0	./.	./.	0/1:37,0:37:0:0,0,0	0/1:20,0:20:34.02:80,0,34	0/1:21,7:33:21.60:349,0,22	1/1:23,0:23:0.47:1,0,0	1/1:26,0:26:8.75:145,9,0	1/1:34,0:34:6.61:78,7,0	0/1:14,0:13:0:0,0,0	1/1:22,0:28:9.03:172,9,0	1/1:28,0:29:21.07:374,21,0	1/1:23,0:23:3.01:51,3,0	1/1:20,0:20:4.24:27,4,0	1/1:25,0:25:9.02:145,9,0	0/0:33,0:35:30.96:0,31,390	0/0:15,0:20:17.92:0,18,240	1/1:17,0:17:2.99:23,3,0	0/1:22,0:22:0:0,0,0	1/1:25,0:25:3.01:69,3,0	1/1:17,0:19:3.01:52,3,0	0/1:14,0:15:0.11:0,0,0	0/1:18,11:31:40.01:64,0,40	0/1:23,0:22:0:0,0,0	1/1:29,0:29:18.49:269,18,0	1/1:22,0:22:16.30:251,16,0	./.
chr10	95364856	.	G	GC	1237.88	PASS	AB=0.801;AC=26;AF=0.464;AN=56;BaseQRankSum=-4.926;DP=434;FS=2.833;HRun=11;HaplotypeScore=69.8747;InbreedingCoeff=0.2858;MQ=69.38;MQ0=0;MQRankSum=-3.787;QD=4.71;ReadPosRankSum=-1.292;VQSLOD=1.1412;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:30:48.88:0,49,143	0/0:3,0:3:2.98:0,3,23	0/1:11,1:11:24.17:24,0,119	0/0:9,0:10:16.60:0,17,85	0/1:4,0:5:0:0,0,0	1/1:6,6:12:6:55,6,0	1/1:8,20:29:35.53:318,36,0	1/1:6,5:11:8.72:59,9,0	0/1:8,9:17:17.23:25,0,17	0/0:12,0:12:8.93:0,9,70	0/0:8,0:8:8.93:0,9,70	1/1:5,14:19:15.03:152,15,0	1/1:9,7:16:2.99:31,3,0	0/1:9,10:19:8.21:100,0,8	1/1:14,3:17:23.92:203,24,0	0/1:5,7:12:11.21:79,0,11	0/0:25,0:28:66.54:0,67,488	0/1:11,2:16:23.97:24,0,184	0/1:18,1:20:1.59:2,0,159	0/0:10,0:11:7.96:0,8,51	0/0:33,0:34:45.35:0,45,333	1/1:6,0:6:2.78:20,3,0	0/1:3,0:3:0:0,0,0	1/1:9,14:23:6.76:244,7,0	0/1:6,4:10:17.23:24,0,17	0/0:20,0:20:26.83:0,27,206	0/0:14,0:14:17.86:0,18,139	0/1:11,4:16:14.21:52,0,14
chr10	95365651	.	C	CCCG	532.67	PASS	AB=0.775;AC=2;AF=0.036;AN=56;BaseQRankSum=5.738;DP=745;FS=21.617;HRun=0;HaplotypeScore=113.5085;InbreedingCoeff=-0.0377;MQ=77.93;MQ0=0;MQRankSum=0.987;QD=14.40;ReadPosRankSum=-3.146;VQSLOD=1.3497;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,2249	0/0:15,0:15:42.06:0,42,696	0/1:13,7:20:99:364,0,551	0/1:13,4:17:99:257,0,398	0/0:14,0:14:36.12:0,36,670	0/0:17,0:17:51.16:0,51,897	0/0:38,0:38:99:0,111,1994	0/0:23,0:23:60.17:0,60,969	0/0:25,0:25:72.18:0,72,1303	0/0:25,0:25:69.23:0,69,1228	0/0:8,0:8:24.08:0,24,440	0/0:36,0:36:99:0,108,1980	0/0:23,0:23:69.22:0,69,1251	0/0:38,0:38:99:0,111,1991	0/0:28,0:28:84.26:0,84,1491	0/0:20,0:20:60.16:0,60,1016	0/0:48,0:48:99:0,144,2627	0/0:32,0:32:87.24:0,87,1577	0/0:26,0:26:78.20:0,78,1351	0/0:13,0:13:39.13:0,39,727	0/0:92,0:92:99:0,265,4787	0/0:25,0:25:75.23:0,75,1312	0/0:5,0:5:15.04:0,15,249	0/0:32,0:31:93.31:0,93,1694	0/0:16,0:16:48.15:0,48,853	0/0:16,0:16:48.15:0,48,863	0/0:24,0:24:69.21:0,69,1237	0/0:26,0:26:75.24:0,75,1365
chr10	95367569	.	TG	T	5403.53	PASS	AB=0.652;AC=31;AF=0.554;AN=56;BaseQRankSum=6.642;DP=535;FS=14.340;HRun=10;HaplotypeScore=95.1803;InbreedingCoeff=0.8651;MQ=81.57;MQ0=0;MQRankSum=-6.367;QD=16.94;ReadPosRankSum=5.197;VQSLOD=4.0067;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,21:32:32.78:513,33,0	0/0:3,0:3:2.97:0,3,20	0/0:20,0:20:43.81:0,44,336	0/0:25,0:25:31.50:0,32,303	0/0:12,0:12:27.03:0,27,273	1/1:5,15:20:41.98:365,42,0	1/1:6,22:28:68.96:595,69,0	0/0:13,0:19:9.74:0,10,80	0/0:15,1:16:6.97:0,7,257	1/1:7,17:24:56.94:490,57,0	1/1:3,1:4:2.98:26,3,0	1/1:7,10:17:29.93:257,30,0	1/1:4,14:18:21.24:318,21,0	1/1:13,13:26:47.93:413,48,0	0/0:24,0:24:45.08:0,45,467	0/0:15,0:15:42.09:0,42,449	0/0:37,0:37:87.21:0,87,946	0/0:27,0:27:63.62:0,64,678	1/1:4,15:19:44.98:390,45,0	0/1:7,8:15:3.22:199,0,3	1/1:17,35:51:89.94:781,90,0	1/1:4,4:8:8.97:78,9,0	1/1:2,6:8:11.98:104,12,0	1/1:6,13:19:38.96:333,39,0	0/0:12,0:12:33.05:0,33,334	1/1:7,10:17:32.97:283,33,0	1/1:2,10:12:29.99:260,30,0	0/0:3,0:6:11.57:0,12,66
chr10	95367598	.	GT	G	2243.88	PASS	AB=0.969;AC=28;AF=0.500;AN=56;BaseQRankSum=13.757;DP=491;FS=4.193;HRun=1;HaplotypeScore=95.2082;InbreedingCoeff=0.6775;MQ=76.96;MQ0=0;MQRankSum=-6.831;QD=7.22;ReadPosRankSum=1.076;VQSLOD=0.8817;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:36:9.84:225,0,10	0/0:3,0:3:9.03:0,9,126	0/0:18,0:18:45.18:0,45,589	0/0:9,0:9:20.56:0,21,271	0/0:10,0:10:27.08:0,27,376	1/1:13,1:14:9.50:133,9,0	0/1:19,0:19:89.58:90,0,97	0/0:18,0:18:33.19:0,33,512	0/0:17,0:17:48.15:0,48,682	1/1:22,0:22:45.60:194,46,0	1/1:10,1:11:16.93:91,17,0	1/1:19,1:20:52.35:241,52,0	1/1:18,2:20:27.84:222,28,0	1/1:20,0:20:50.38:241,50,0	0/0:15,0:15:44.92:0,45,591	0/0:16,0:16:48.14:0,48,677	0/0:31,0:31:72.31:0,72,1226	0/0:21,0:21:63.01:0,63,826	0/1:13,0:13:13.79:90,0,14	0/1:12,2:14:14.66:86,0,15	1/1:56,0:55:3.98:301,4,0	1/1:11,0:11:27.12:111,27,0	1/1:8,0:8:20.96:94,21,0	1/1:20,0:20:10.17:117,10,0	0/0:16,0:16:48.16:0,48,687	1/1:15,0:15:29.04:118,29,0	1/1:12,0:12:14.17:103,14,0	0/0:6,0:6:18.06:0,18,263
chr10	95367599	.	TG	T	7137.61	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=11.042;DP=484;FS=23.249;HRun=6;HaplotypeScore=76.7118;InbreedingCoeff=0.9884;MQ=76.47;MQ0=0;MQRankSum=-6.841;QD=23.33;ReadPosRankSum=-0.317;VQSLOD=3.0949;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,24:35:51.01:548,51,0	0/0:3,0:3:8.99:0,9,99	0/0:17,0:17:42.51:0,43,519	0/0:9,0:9:20.28:0,20,239	0/0:10,0:10:24.08:0,24,315	1/1:2,12:14:36.09:386,36,0	1/1:8,11:19:36.07:377,36,0	0/0:16,0:16:30.10:0,30,394	0/0:17,0:17:45.14:0,45,585	1/1:1,21:22:63.16:676,63,0	1/1:2,9:11:20.95:209,21,0	1/1:4,16:20:51.12:547,51,0	1/1:6,14:20:51.11:546,51,0	1/1:3,17:20:54.09:569,54,0	0/0:16,0:16:45.11:0,45,548	0/0:16,0:16:48.16:0,48,630	0/0:31,0:31:90.28:0,90,1166	0/0:21,0:21:54.18:0,54,709	1/1:6,8:14:30.04:315,30,0	1/1:5,9:14:27.06:289,27,0	1/1:10,43:52:93.15:1000,93,0	1/1:1,10:11:30.07:322,30,0	1/1:0,8:8:24.06:258,24,0	1/1:2,17:19:36.09:387,36,0	0/0:16,0:16:48.13:0,48,614	1/1:2,12:14:33.07:354,33,0	1/1:1,11:12:33.08:355,33,0	0/0:6,0:6:18.06:0,18,237
chr10	95367752	.	T	TC	2741.20	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-5.979;DP=243;FS=4.651;HRun=7;HaplotypeScore=32.0874;InbreedingCoeff=0.8744;MQ=78.48;MQ0=0;MQRankSum=-0.685;QD=21.09;ReadPosRankSum=-0.188;VQSLOD=2.4328;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.06:0,60,565	0/0:3,0:3:6.01:0,6,58	0/0:8,0:7:8.83:0,9,80	0/0:11,0:10:17.68:0,18,132	0/0:9,0:9:21.03:0,21,203	1/1:0,3:3:6.02:72,6,0	1/1:2,11:13:30.09:362,30,0	0/0:8,1:9:6:0,6,58	0/0:5,0:5:9:0,9,87	1/1:2,12:14:33.09:389,33,0	1/1:2,4:6:5.94:72,6,0	1/1:2,3:5:9.03:109,9,0	1/1:0,7:7:15.05:181,15,0	1/1:1,14:15:24.07:290,24,0	0/0:8,0:8:15.01:0,15,142	0/0:8,0:8:18.01:0,18,174	0/0:7,0:7:18.03:0,18,174	0/0:10,0:10:21.02:0,21,203	1/1:3,5:8:15.05:181,15,0	1/1:1,4:5:8.99:91,9,0	1/1:3,10:13:15.05:181,15,0	1/1:1,9:10:15.05:181,15,0	1/1:1,6:7:12.04:145,12,0	1/1:4,6:10:27.06:304,27,0	0/0:8,0:8:13.89:0,14,120	1/1:0,8:8:24.07:290,24,0	1/1:0,6:6:9.03:109,9,0	0/0:4,0:4:12.02:0,12,116
chr10	95368975	.	GCACACA	G	1488.27	PASS	AB=0.909;AC=30;AF=0.652;AN=46;BaseQRankSum=1.812;DP=597;FS=0.923;HRun=0;HaplotypeScore=130.3874;InbreedingCoeff=0.1179;MQ=70.29;MQ0=13;MQRankSum=-2.716;QD=3.96;ReadPosRankSum=-0.382;VQSLOD=2.2738;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:2.40:0,2,39	0/0:4,0:5:2.94:0,3,18	./.	./.	1/1:18,0:21:3.01:42,3,0	1/1:7,5:12:3.01:60,3,0	1/1:25,2:26:19.64:271,20,0	./.	0/1:14,0:17:6.64:36,0,7	1/1:17,1:20:6.01:99,6,0	0/0:11,0:11:2.99:0,3,24	0/1:21,5:27:4.33:158,0,4	1/1:19,0:20:9.92:168,10,0	1/1:15,0:15:2.70:14,3,0	1/1:16,0:21:2.49:41,2,0	0/1:17,0:19:23.21:72,0,23	0/0:39,0:39:34.93:0,35,1446	0/0:15,0:15:15.02:0,15,289	1/1:11,0:11:2.90:16,3,0	1/1:11,0:11:2.37:8,2,0	0/1:45,0:44:47.96:159,0,48	./.	0/1:13,2:15:9.24:52,0,9	1/1:33,3:36:16.73:258,17,0	1/1:10,0:11:3.48:43,3,0	0/1:19,0:18:18.22:35,0,18	1/1:20,1:24:0.92:95,1,0	./.
chr10	95369215	.	T	TGTAA	42374.55	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-11.117;DP=739;FS=1.217;HRun=0;HaplotypeScore=106.5819;InbreedingCoeff=0.9796;MQ=89.95;MQ0=0;MQRankSum=-13.088;QD=68.57;ReadPosRankSum=3.672;VQSLOD=6.9682;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,49:55:99:3861,144,0	1/1:2,5:6:15.05:411,15,0	0/0:31,0:31:82.12:0,82,1417	0/0:34,0:34:96.64:0,97,1647	1/1:1,24:25:72.14:1824,72,0	1/1:1,21:23:63.18:1663,63,0	1/1:3,21:25:66.14:1723,66,0	1/1:6,29:37:99:2834,114,0	1/1:2,31:34:90.27:2393,90,0	1/1:5,17:24:72.16:1789,72,0	1/1:5,12:18:42.14:1061,42,0	1/1:4,33:38:99:2684,102,0	1/1:3,25:27:75.19:1982,75,0	1/1:3,29:35:90.31:2412,90,0	1/1:1,21:23:54.19:1478,54,0	1/1:4,19:24:60.18:1528,60,0	0/0:33,0:33:96.33:0,96,1830	0/0:23,0:23:63.22:0,63,1221	1/1:4,8:13:39.10:948,39,0	1/1:0,14:14:39.13:1065,39,0	1/1:3,34:41:99:2674,105,0	1/1:1,27:29:84.18:2171,84,0	1/1:3,19:24:60.12:1573,60,0	1/1:4,26:30:75.22:2018,75,0	1/1:1,15:17:42.08:1086,42,0	1/1:5,17:22:60.19:1492,60,0	1/1:1,20:22:54.19:1458,54,0	1/1:0,8:8:9.03:246,9,0
chr10	95369474	.	G	GA	446.45	PASS	AB=0.667;AC=5;AF=0.089;AN=56;BaseQRankSum=0.532;DP=626;FS=0.000;HRun=11;HaplotypeScore=99.8538;InbreedingCoeff=0.5612;MQ=55.15;MQ0=14;MQRankSum=-3.658;QD=6.57;ReadPosRankSum=-4.785;VQSLOD=1.2398;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,1:28:33.99:186,34,0	0/0:8,0:8:20.92:0,21,162	0/0:19,1:2:1.55:0,2,4	0/0:15,1:5:0.34:0,0,20	0/0:28,2:30:12.78:0,13,449	0/0:15,1:16:11.35:0,11,266	0/0:21,1:22:38.69:0,39,299	0/1:15,15:27:99:328,0,101	0/0:16,1:17:4.49:0,4,208	0/0:22,0:22:44.75:0,45,339	0/0:15,0:16:17.88:0,18,139	0/0:20,0:21:13.25:0,13,265	0/0:14,0:14:20.81:0,21,155	0/0:27,0:26:41.79:0,42,320	0/0:19,1:20:14.72:0,15,274	0/0:23,0:23:50.77:0,51,394	0/0:34,1:37:35.78:0,36,575	0/0:24,0:28:55.73:0,56,423	0/0:16,0:14:29.87:0,30,230	0/0:15,0:14:32.86:0,33,255	0/0:28,1:29:23.31:0,23,361	0/0:29,0:29:52.81:0,53,400	0/0:28,1:29:52.89:0,53,411	0/0:26,0:25:56.12:0,56,423	0/0:27,0:28:55.62:0,56,411	0/0:21,0:21:35.77:0,36,277	0/0:23,0:23:29.78:0,30,232	1/1:7,2:9:5.98:52,6,0
chr10	95369514	.	GAGAAA	G	12883.54	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=3.815;DP=722;FS=24.744;HRun=0;HaplotypeScore=144.0580;InbreedingCoeff=0.7718;MQ=55.66;MQ0=23;MQRankSum=1.378;QD=25.72;ReadPosRankSum=1.933;VQSLOD=2.9654;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:22:97.39:176,0,97	1/1:7,1:8:18.06:288,18,0	0/0:62,0:9:7.74:0,8,108	0/0:97,0:23:13.34:0,13,162	1/1:32,1:33:54.08:816,54,0	1/1:5,11:16:15.05:277,15,0	1/1:6,16:22:15.05:271,15,0	0/1:35,0:32:1.18:1,0,85	1/1:14,0:14:30.10:467,30,0	1/1:4,26:30:75.09:1209,75,0	1/1:4,15:19:35.97:562,36,0	1/1:14,7:21:51.13:853,51,0	1/1:2,9:11:21.54:391,22,0	1/1:8,13:21:21.07:384,21,0	1/1:23,1:24:63.15:953,63,0	1/1:18,0:18:36.07:495,36,0	0/0:33,0:33:69.18:0,69,1667	0/0:25,0:25:69.17:0,69,1500	1/1:6,12:16:39.05:615,39,0	1/1:7,16:24:42.09:738,42,0	1/1:6,11:17:18.06:334,18,0	1/1:7,12:19:27.09:495,27,0	1/1:6,17:23:26.39:447,26,0	1/1:6,21:26:21.24:704,21,0	1/1:23,1:24:41.93:626,42,0	1/1:2,20:22:62.73:1047,63,0	1/1:8,15:23:33.11:607,33,0	1/1:0,0:8:11.97:127,12,0
chr10	95369542	.	AAATG	A	5072.33	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=11.778;DP=729;FS=18.270;HRun=0;HaplotypeScore=174.0965;InbreedingCoeff=-0.0252;MQ=70.81;MQ0=12;MQRankSum=-2.999;QD=11.82;ReadPosRankSum=9.625;VQSLOD=2.3856;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:32.65:0,33,787	1/1:3,7:10:23.33:338,23,0	0/0:64,0:26:52.55:0,53,870	0/0:80,0:31:40.47:0,40,699	1/1:13,15:28:69.91:895,70,0	0/1:13,0:13:35.99:36,0,91	0/1:24,0:24:36.62:37,0,367	0/0:31,0:30:65.12:0,65,1225	1/1:11,8:19:52.20:631,52,0	0/1:34,0:34:19.88:20,0,394	0/1:20,0:20:80.24:80,0,227	0/1:18,0:18:65.42:65,0,119	0/1:15,0:15:28.64:29,0,274	0/1:23,0:23:44.37:44,0,469	1/1:13,13:26:73.60:1158,74,0	1/1:12,8:20:13.52:565,14,0	0/0:38,0:37:99:0,111,2276	0/0:27,0:27:75.21:0,75,1657	0/1:24,0:23:53.04:53,0,457	0/1:20,0:20:95.86:96,0,189	0/0:19,0:19:6.78:0,7,348	0/1:18,0:18:53.81:54,0,271	0/1:22,0:22:60.85:61,0,296	0/1:26,0:26:15.43:15,0,216	1/1:11,10:21:60.72:797,61,0	0/1:25,0:25:29.42:29,0,242	0/1:23,0:23:68.32:68,0,271	0/0:12,0:12:8.93:0,9,208
chr10	95369546	.	G	GA	2808.85	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-2.144;DP=715;FS=22.636;HRun=8;HaplotypeScore=148.5673;InbreedingCoeff=0.9000;MQ=72.20;MQ0=10;MQRankSum=-0.828;QD=14.48;ReadPosRankSum=1.189;VQSLOD=2.0162;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:54:0,54,487	1/1:8,2:10:20.99:196,21,0	0/0:60,0:27:50.94:0,51,432	0/1:68,0:30:14.94:15,0,240	1/1:20,8:28:60.05:593,60,0	0/0:12,0:12:18.01:0,18,163	0/0:26,0:26:44.67:0,45,382	0/0:24,0:24:66.03:0,66,601	1/1:9,12:21:35.96:583,36,0	0/0:33,0:33:92.99:0,93,835	0/0:20,0:20:45.01:0,45,406	0/0:18,0:18:51.01:0,51,457	0/0:17,0:17:44.98:0,45,397	0/0:23,0:23:48.02:0,48,437	1/1:17,10:27:68.95:643,69,0	1/1:10,7:17:37.46:431,37,0	0/0:35,0:35:95.08:0,95,857	0/0:26,0:26:59.98:0,60,541	0/0:25,0:25:53.03:0,53,537	0/0:22,0:22:57:0,57,508	0/0:19,0:19:39:0,39,350	0/0:17,0:17:42.01:0,42,378	0/0:23,0:23:38.85:0,39,353	0/0:26,0:26:50.94:0,51,462	1/1:14,8:22:55.60:538,56,0	0/0:25,0:25:75.04:0,75,678	0/0:26,0:26:56.95:0,57,498	0/0:12,0:12:23.63:0,24,215
chr10	95369663	.	TG	T	7734.90	PASS	AB=0.787;AC=46;AF=0.821;AN=56;BaseQRankSum=3.127;DP=637;FS=0.000;HRun=11;HaplotypeScore=77.7775;InbreedingCoeff=0.3140;MQ=73.88;MQ0=0;MQRankSum=-0.173;QD=13.41;ReadPosRankSum=2.423;VQSLOD=5.0971;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:28:17.20:0,17,97	1/1:2,8:10:20.97:172,21,0	0/1:16,1:16:22.91:23,0,114	0/1:18,0:16:27.99:28,0,102	1/1:10,13:24:14.98:318,15,0	1/1:5,13:18:38.93:320,39,0	0/1:9,17:26:3.03:320,0,3	0/1:8,10:19:8.05:148,0,8	1/1:6,23:30:61.96:498,62,0	1/1:7,13:20:9.95:288,10,0	1/1:4,10:15:25.13:201,25,0	1/1:5,12:18:34.99:277,35,0	1/1:10,14:26:30.43:356,30,0	1/1:5,20:27:54.99:430,55,0	1/1:6,25:31:71.89:591,72,0	1/1:5,19:24:56.92:468,57,0	0/1:39,4:44:8.95:9,0,752	0/0:29,2:32:10.66:0,11,492	1/1:3,15:19:20.99:368,21,0	0/1:7,10:17:0.23:148,0,0	1/1:12,22:34:58.95:473,59,0	1/1:10,12:23:31.99:252,32,0	1/1:6,13:19:26.48:221,26,0	1/1:2,33:36:91.93:745,92,0	1/1:4,14:18:41.95:345,42,0	1/1:6,9:15:23.96:197,24,0	1/1:3,22:25:59.92:490,60,0	1/1:0,2:2:5.99:49,6,0
chr10	95371313	.	AT	A	2007.67	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.543;DP=571;FS=6.403;HRun=9;HaplotypeScore=55.5028;InbreedingCoeff=0.9566;MQ=69.65;MQ0=5;MQRankSum=0.346;QD=20.49;ReadPosRankSum=2.505;VQSLOD=4.3427;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1202	1/1:1,8:9:21.01:192,21,0	0/0:11,0:8:3.07:0,3,110	0/0:14,0:11:11.95:0,12,121	1/1:3,19:23:53.06:471,53,0	0/0:29,0:29:84.24:0,84,961	0/0:18,0:18:42.12:0,42,485	0/0:34,0:34:90.26:0,90,1027	1/1:2,15:16:42.02:383,42,0	0/0:26,0:26:57.16:0,57,643	0/0:18,0:18:51.15:0,51,586	0/0:20,0:20:51.15:0,51,584	0/0:14,0:14:30.07:0,30,335	0/0:23,0:23:69.20:0,69,789	1/1:0,15:15:36.02:330,36,0	1/1:1,15:16:42:379,42,0	0/0:32,0:32:84.25:0,84,968	0/0:25,0:24:56.76:0,57,633	0/0:27,1:28:44.58:0,45,748	0/0:24,1:25:57.17:0,57,658	0/0:18,0:17:45.13:0,45,519	0/0:9,0:9:27.08:0,27,312	0/0:19,0:19:57.10:0,57,641	0/0:12,0:12:27.07:0,27,302	1/1:0,18:18:48.03:439,48,0	0/0:27,0:27:63.19:0,63,726	0/0:26,0:26:78.23:0,78,900	0/0:7,0:7:18.05:0,18,208
chr10	95375085	.	GA	G	12976.20	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=13.269;DP=727;FS=6.349;HRun=4;HaplotypeScore=74.9174;InbreedingCoeff=0.9999;MQ=83.35;MQ0=0;MQRankSum=-2.785;QD=29.63;ReadPosRankSum=3.542;VQSLOD=5.1105;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,44:47:99:1330,111,0	0/0:15,0:15:42.08:0,42,547	0/0:19,0:19:50.29:0,50,664	0/0:27,0:27:58.78:0,59,840	0/0:19,0:19:57.17:0,57,763	1/1:1,27:28:60.18:719,60,0	1/1:1,31:32:81.25:971,81,0	0/0:28,0:28:78.23:0,78,1019	0/0:21,0:21:60.18:0,60,806	1/1:3,25:28:75.19:859,75,0	1/1:3,11:14:39.09:446,39,0	1/1:0,32:32:77.93:935,78,0	1/1:2,23:25:60.18:719,60,0	1/1:0,26:26:63.17:755,63,0	0/0:42,0:42:99:0,126,1715	0/0:30,0:30:84.24:0,84,1123	0/0:34,0:34:93.26:0,93,1235	0/0:17,0:17:48.13:0,48,652	1/1:1,18:19:54.11:612,54,0	1/1:0,17:17:48.06:543,48,0	1/1:1,53:54:99:1690,141,0	1/1:1,14:15:33.10:395,33,0	1/1:3,16:19:41.92:503,42,0	1/1:1,30:31:72.22:863,72,0	0/0:22,0:22:63.18:0,63,832	1/1:1,33:34:90.20:1027,90,0	1/1:0,17:17:51.16:610,51,0	0/0:15,0:15:45.14:0,45,613
chr10	95376465	.	T	TACATTG	35241.33	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-8.298;DP=652;FS=24.102;HRun=0;HaplotypeScore=126.4733;InbreedingCoeff=0.9974;MQ=72.91;MQ0=0;MQRankSum=-18.049;QD=77.62;ReadPosRankSum=2.495;VQSLOD=3.9496;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,157,3575	1/1:2,4:6:18.06:607,18,0	0/0:18,0:18:39.12:0,39,776	0/0:17,0:18:44.87:0,45,933	1/1:2,18:21:44.91:973,45,0	1/1:2,23:26:66.23:2259,66,0	1/1:10,18:28:66.23:2174,66,0	0/0:31,0:31:90.29:0,90,2028	1/1:4,18:26:57.05:1945,57,0	1/1:5,21:25:72.24:2257,72,0	1/1:3,11:11:27.09:783,27,0	1/1:3,20:23:60.16:1978,60,0	1/1:5,25:30:81.28:2863,81,0	1/1:4,19:23:57.20:1957,57,0	1/1:4,27:32:90.31:3113,90,0	1/1:1,20:20:54.19:1919,54,0	0/0:30,0:30:84.29:0,84,1946	0/0:33,0:33:87.26:0,87,1983	1/1:2,14:20:57.19:1780,57,0	1/1:0,9:10:27.09:891,27,0	1/1:5,12:18:30.06:928,30,0	1/1:3,13:16:24.08:817,24,0	1/1:4,14:18:42.10:1298,42,0	1/1:8,19:29:48.19:1614,48,0	1/1:1,10:12:27.09:890,27,0	1/1:8,15:22:63.22:2127,63,0	1/1:5,18:24:60.21:2069,60,0	0/0:13,0:12:33.11:0,33,757
chr10	95376802	.	A	AAAAAAAGAAAG	18911.85	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-5.525;DP=465;FS=58.022;HRun=0;HaplotypeScore=103.3697;InbreedingCoeff=0.8304;MQ=54.88;MQ0=15;MQRankSum=-9.006;QD=55.62;ReadPosRankSum=-3.216;VQSLOD=2.2513;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:81.11:0,81,2263	1/1:0,0:4:6.02:210,6,0	0/0:14,0:7:4.50:0,5,193	0/0:17,0:8:17.90:0,18,300	1/1:2,0:14:24.08:803,24,0	1/1:5,7:13:12.51:648,13,0	1/1:4,0:3:8.99:152,9,0	1/1:11,12:29:63.08:2108,63,0	1/1:0,0:7:6.02:210,6,0	1/1:6,9:16:33.01:1493,33,0	1/1:1,6:11:14.98:661,15,0	1/1:2,7:11:6.02:321,6,0	1/1:4,6:14:18.05:968,18,0	1/1:2,7:11:15.05:809,15,0	1/1:1,0:12:18.06:629,18,0	1/1:1,0:14:21.07:734,21,0	0/0:24,0:24:51.07:0,51,1615	0/0:35,0:33:65.71:0,66,1794	1/1:10,9:20:36.09:1490,36,0	1/1:4,6:17:17.62:535,18,0	1/1:1,3:6:9.03:436,9,0	1/1:7,0:7:12.04:439,12,0	1/1:0,3:7:9.03:485,9,0	1/1:8,0:7:18:449,18,0	1/1:0,0:17:30.10:1049,30,0	1/1:5,17:28:57.47:2353,57,0	1/1:6,12:35:17.91:961,18,0	1/1:6,10:17:18.06:971,18,0
chr10	95377672	.	G	GCC	11804.54	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=13.171;DP=643;FS=20.600;HRun=6;HaplotypeScore=124.0728;InbreedingCoeff=0.9958;MQ=87.13;MQ0=0;MQRankSum=-7.145;QD=25.33;ReadPosRankSum=3.733;VQSLOD=2.8161;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.20:0,84,994	1/1:2,0:9:16.09:54,16,0	0/0:27,0:27:54.83:0,55,662	0/0:26,0:26:65.61:0,66,708	1/1:5,0:26:45.26:167,45,0	1/1:3,20:25:42.10:671,42,0	1/1:3,15:19:33.11:550,33,0	0/0:20,0:20:44.92:0,45,481	1/1:6,0:30:59.43:205,59,0	1/1:6,15:21:50.58:774,51,0	1/1:0,6:7:18.02:268,18,0	1/1:7,20:28:54.18:902,54,0	1/1:0,11:11:27.09:451,27,0	1/1:1,19:22:47.65:760,48,0	1/1:1,0:34:77.11:267,77,0	1/1:1,0:21:47.29:164,47,0	0/0:38,0:38:99:0,111,1298	0/0:22,0:22:63.05:0,63,731	1/1:10,12:22:42.07:634,42,0	1/1:0,12:13:30.06:469,30,0	1/1:4,26:30:66.59:1101,67,0	1/1:4,15:19:33.11:538,33,0	1/1:0,18:19:45.15:750,45,0	1/1:2,34:36:75.73:1255,76,0	1/1:1,0:25:52.28:182,52,0	1/1:3,14:19:44.64:704,45,0	1/1:5,24:29:57.19:939,57,0	0/0:15,0:15:33.03:0,33,383
chr10	95379197	.	GTTCTCGGGGGGGGGGGCAGGGGGACGCT	G	778.43	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.604;DP=282;FS=10.490;HRun=0;HaplotypeScore=200.3178;InbreedingCoeff=0.5179;MQ=78.08;MQ0=1;MQRankSum=1.996;QD=43.25;ReadPosRankSum=0.552;VQSLOD=1.7283;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:6.89:0,7,120	0/0:3,0:3:9.03:0,9,351	0/0:11,0:9:12.17:0,12,734	0/0:14,0:14:16.56:0,17,753	0/0:14,0:14:26.59:0,27,804	0/0:4,0:4:7.33:0,7,124	0/0:11,0:11:26.63:0,27,557	1/1:1,16:17:48.12:659,48,0	0/0:12,0:12:30.08:0,30,1953	0/0:3,0:3:3.01:0,3,56	0/0:4,0:4:5.98:0,6,95	0/0:8,0:8:15.05:0,15,811	0/0:8,0:8:15.02:0,15,289	0/0:7,0:7:9.03:0,9,480	0/0:30,0:30:66.16:0,66,5019	0/0:20,0:20:48.15:0,48,4656	0/0:20,0:20:57.09:0,57,2640	0/0:11,0:11:33.02:0,33,1874	0/0:9,0:9:17.27:0,17,225	0/0:5,0:5:5.64:0,6,40	0/0:20,0:20:32.34:0,32,796	0/0:3,0:3:6.02:0,6,318	0/0:8,0:8:2.49:0,2,26	0/0:8,0:8:8.95:0,9,68	0/0:11,0:11:27.08:0,27,1734	0/0:4,0:4:12:0,12,132	0/0:12,0:12:24.05:0,24,592	1/1:0,1:1:3.01:227,3,0
chr10	95379201	.	TCGGGGGGGGGGG	T	732.87	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=-1.568;DP=274;FS=4.362;HRun=0;HaplotypeScore=117.3807;InbreedingCoeff=0.1456;MQ=77.76;MQ0=1;MQRankSum=3.530;QD=8.42;ReadPosRankSum=-3.797;VQSLOD=1.1296;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:4:62.90:63,0,70	0/0:3,0:3:8.94:0,9,203	0/0:13,0:10:20.35:0,20,768	0/0:14,0:14:18.40:0,18,869	0/0:13,0:13:20.91:0,21,477	0/1:4,0:4:39.97:40,0,57	0/1:9,0:9:80.52:81,0,240	1/1:16,0:16:38.69:276,39,0	0/0:11,0:11:24.08:0,24,1032	0/1:3,0:3:12.29:49,0,12	0/0:3,0:3:3.01:0,3,58	0/0:8,0:8:15.05:0,15,553	0/0:8,0:8:8.98:0,9,324	0/0:7,0:7:9.03:0,9,325	0/0:28,0:28:57.19:0,57,2655	0/0:20,0:20:45.15:0,45,2228	0/0:23,0:23:42.01:0,42,1638	0/0:14,0:14:36.04:0,36,1852	0/1:11,0:11:99:108,0,397	1/1:0,5:5:0.47:1,0,0	0/1:16,0:16:99:133,0,359	0/0:2,0:2:2.86:0,3,143	0/1:7,0:7:0:0,0,0	1/1:6,0:6:0.47:1,0,0	0/0:9,0:9:24.07:0,24,1038	0/1:5,0:5:43.88:44,0,170	0/0:11,0:11:20.43:0,20,498	1/1:1,0:1:3.01:84,3,0
chr10	95379202	.	C	CAGGGGG	6350.51	PASS	AB=0.868;AC=39;AF=0.696;AN=56;BaseQRankSum=2.375;DP=293;FS=18.242;HRun=0;HaplotypeScore=95.3737;InbreedingCoeff=0.4066;MQ=75.83;MQ0=1;MQRankSum=-6.455;QD=27.14;ReadPosRankSum=1.693;VQSLOD=3.2260;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:18.02:238,18,0	0/1:3,0:3:34.78:45,0,35	0/1:12,0:9:30.58:31,0,187	0/0:14,0:15:16.50:0,16,225	0/1:13,0:13:44.44:100,0,44	1/1:6,0:6:14.97:173,15,0	1/1:7,0:8:24.01:311,24,0	1/1:16,0:16:38.69:277,39,0	0/1:11,0:11:8.84:302,0,9	1/1:4,0:4:12.02:117,12,0	1/1:0,3:4:2.96:19,3,0	1/1:3,2:12:20.70:557,21,0	1/1:0,6:8:9.03:327,9,0	1/1:1,5:8:11.87:334,12,0	1/1:27,0:27:9.47:922,9,0	1/1:19,0:19:25.21:761,25,0	0/0:10,0:23:35.86:0,36,467	0/0:14,0:14:23.73:0,24,443	1/1:12,0:12:32.67:349,33,0	0/0:6,0:6:0.17:0,0,0	1/1:20,0:21:41.96:408,42,0	1/1:2,0:3:8.23:102,8,0	0/1:1,0:8:0.01:0,0,0	0/1:1,2:6:0.28:0,0,0	0/1:9,0:9:2.71:368,0,3	1/1:5,0:5:14.95:178,15,0	1/1:2,7:12:20.43:433,20,0	0/0:1,0:1:3.01:0,3,41
chr10	95379209	.	G	GTGGGGT	6549.94	PASS	AB=0.901;AC=36;AF=0.667;AN=54;BaseQRankSum=-2.964;DP=271;FS=23.085;HRun=0;HaplotypeScore=80.5869;InbreedingCoeff=0.3082;MQ=78.86;MQ0=1;MQRankSum=-7.912;QD=34.11;ReadPosRankSum=4.758;VQSLOD=2.8284;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:3.52:72,4,0	1/1:0,1:3:2.98:105,3,0	0/0:14,0:11:23.89:0,24,349	0/0:15,0:15:31.05:0,31,471	1/1:1,9:15:12.33:275,12,0	1/1:3,0:6:3.18:41,3,0	0/1:3,0:4:14.06:77,0,14	0/0:16,0:16:0:0,0,0	1/1:2,10:16:18.04:626,18,0	0/1:2,0:2:12.02:24,0,12	./.	1/1:9,0:10:23.99:378,24,0	1/1:5,0:5:9.03:200,9,0	1/1:5,0:6:15.03:248,15,0	1/1:1,20:28:51.18:1761,51,0	1/1:2,15:20:42.12:1464,42,0	0/0:19,0:19:33.03:0,33,576	0/0:12,0:12:30.10:0,30,641	0/1:8,0:8:11.29:81,0,11	1/1:7,0:7:2.51:24,3,0	0/1:11,0:20:20.97:21,0,50	1/1:1,0:2:5.23:51,5,0	1/1:4,0:4:2.99:23,3,0	1/1:5,0:5:2.59:25,3,0	1/1:1,7:11:21.07:729,21,0	0/1:4,0:4:7.15:60,0,7	0/1:10,0:11:1.66:264,0,2	0/0:1,0:1:3.01:0,3,42
chr10	95379213	.	GCA	G	57.34	PASS	AB=0.941;AC=10;AF=0.185;AN=54;BaseQRankSum=-0.440;DP=270;FS=1.075;HRun=0;HaplotypeScore=72.7778;InbreedingCoeff=-0.0264;MQ=82.14;MQ0=1;MQRankSum=0.285;QD=0.64;ReadPosRankSum=-2.557;VQSLOD=1.2577;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:7:31.75:32,0,129	0/0:4,0:4:6:0,6,71	0/1:15,1:13:34.84:35,0,254	0/0:17,0:17:14.90:0,15,413	0/0:15,0:15:20.36:0,20,223	0/1:6,1:7:17.69:18,0,77	0/1:4,0:4:19.20:19,0,107	0/1:16,0:16:0:0,0,0	0/0:16,0:16:24.04:0,24,288	0/0:4,0:4:12.04:0,12,191	./.	0/0:12,0:12:25.65:0,26,276	0/0:6,0:6:10.97:0,11,72	0/0:6,0:6:16.82:0,17,174	0/0:19,0:19:51.05:0,51,518	0/0:16,0:16:48.13:0,48,554	0/0:18,0:18:32.82:0,33,380	0/0:12,0:12:33.07:0,33,501	0/1:8,1:9:9.22:9,0,343	0/0:8,0:8:9.03:0,9,140	0/1:18,2:20:42.90:43,0,217	0/0:4,0:4:6.67:0,7,97	0/0:3,0:3:3.01:0,3,45	0/0:4,0:4:2.74:0,3,45	0/0:10,0:10:20.97:0,21,214	0/0:5,0:5:14.63:0,15,178	0/1:8,1:9:17.29:17,0,167	1/1:1,0:1:2.84:14,3,0
chr10	95382192	.	CT	C	7143.25	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=7.792;DP=476;FS=2.640;HRun=6;HaplotypeScore=76.2617;InbreedingCoeff=0.9696;MQ=75.80;MQ0=0;MQRankSum=1.219;QD=26.65;ReadPosRankSum=3.385;VQSLOD=5.4739;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:48.12:516,48,0	0/0:8,0:8:21.06:0,21,261	0/0:14,0:14:3.33:0,3,235	0/0:15,0:10:16.17:0,16,127	0/0:34,0:34:90.21:0,90,1114	1/1:2,24:26:60.15:645,60,0	1/1:1,10:11:24.06:258,24,0	0/0:33,0:33:93.26:0,93,1155	0/0:10,0:10:27.09:0,27,355	1/1:2,22:24:66.14:699,66,0	1/1:3,24:27:69.17:740,69,0	1/1:2,8:10:21.05:226,21,0	1/1:1,11:12:24.06:258,24,0	1/1:1,12:13:30.08:322,30,0	0/0:11,0:11:33.11:0,33,434	0/0:10,0:9:30.09:0,30,381	0/0:22,0:22:60.16:0,60,759	0/0:10,0:10:30.10:0,30,394	1/1:3,14:17:39.10:419,39,0	1/1:2,25:27:69.17:740,69,0	1/1:1,7:8:15.04:161,15,0	1/1:1,8:9:21.05:226,21,0	1/1:1,19:20:51.13:548,51,0	1/1:0,7:7:21.05:226,21,0	0/0:21,0:21:57.19:0,57,750	1/1:3,18:21:51.12:548,51,0	1/1:0,20:20:57.14:612,57,0	0/0:20,0:20:57.19:0,57,750
chr10	95382438	.	GTCTGTC	G	5431.01	PASS	AB=0.560;AC=32;AF=0.696;AN=46;BaseQRankSum=7.932;DP=659;FS=2.430;HRun=0;HaplotypeScore=232.8494;InbreedingCoeff=0.7580;MQ=61.91;MQ0=7;MQRankSum=-8.875;QD=13.85;ReadPosRankSum=6.522;VQSLOD=3.2458;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,32:38:3.01:65,3,0	1/1:1,2:3:3.01:36,3,0	0/0:42,0:35:66.16:0,66,1697	0/0:45,0:36:63.15:0,63,1516	./.	1/1:4,21:25:6.02:129,6,0	1/1:6,16:21:5.99:129,6,0	0/0:31,0:31:75.25:0,75,1935	1/1:2,15:17:15.05:322,15,0	1/1:6,20:25:57.14:1100,57,0	./.	1/1:5,19:24:9.03:193,9,0	1/1:6,29:35:48.16:978,48,0	1/1:3,14:16:6.02:129,6,0	0/1:7,15:22:0:0,0,0	1/1:5,21:26:15.05:286,15,0	0/0:22,0:21:45.15:0,45,1337	0/0:16,0:16:36.10:0,36,1010	1/1:11,7:18:21.04:354,21,0	./.	1/1:24,9:33:11.91:178,12,0	./.	0/1:2,18:20:0:0,0,0	./.	1/1:4,17:21:3.01:64,3,0	1/1:3,18:21:40.54:761,41,0	1/1:4,19:23:33.11:707,33,0	0/0:15,0:15:45.06:0,45,1253
chr10	95382442	.	GTC	G	713.95	PASS	AB=0.990;AC=15;AF=0.268;AN=56;BaseQRankSum=11.457;DP=658;FS=5.422;HRun=0;HaplotypeScore=223.8522;InbreedingCoeff=-0.2176;MQ=63.21;MQ0=7;MQRankSum=-11.666;QD=2.11;ReadPosRankSum=8.015;VQSLOD=1.4362;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,1:37:2.80:13,3,0	0/0:3,0:3:5.87:0,6,40	0/0:46,0:39:99:0,105,1698	0/0:50,0:40:79.40:0,79,1431	0/0:18,0:18:9.03:0,9,142	0/1:25,0:25:15.38:18,0,15	0/1:21,0:20:16.35:18,0,16	0/0:35,0:35:96.29:0,96,1611	0/1:17,0:17:47.20:47,0,75	0/1:25,0:24:91.61:235,0,92	0/0:10,0:10:3.01:0,3,49	0/1:23,0:23:22.86:23,0,78	0/1:35,0:35:56.24:180,0,56	0/1:17,0:16:15.27:15,0,63	0/0:19,1:20:9.03:0,9,143	0/1:24,2:26:23.48:23,0,109	0/0:22,0:21:51.16:0,51,885	0/0:16,0:16:45.12:0,45,757	0/1:18,0:18:36.60:37,0,274	0/0:17,0:17:3.01:0,3,49	0/0:29,3:32:21.65:0,22,208	0/0:15,1:16:9.03:0,9,140	0/0:19,0:19:3.01:0,3,50	0/1:28,2:28:0:0,0,0	0/1:21,0:21:4.65:5,0,86	0/1:20,0:20:99:141,0,133	0/1:23,0:23:79.50:105,0,79	0/0:15,0:15:45.15:0,45,805
chr10	95382502	.	GTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	G	3578.03	PASS	AB=1.000;AC=21;AF=0.477;AN=44;BaseQRankSum=6.389;DP=516;FS=29.978;HRun=0;HaplotypeScore=274.3807;InbreedingCoeff=0.5030;MQ=51.22;MQ0=26;MQRankSum=-3.378;QD=19.13;ReadPosRankSum=1.954;VQSLOD=1.4392;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,6:21:0:0,0,0	./.	0/0:39,0:18:29.43:0,29,1122	0/1:55,0:24:10.01:10,0,973	./.	0/0:12,4:16:1.55:0,2,4	0/0:13,0:12:1.55:0,2,4	0/0:39,0:38:99:0,105,6490	0/0:9,0:11:2.96:0,3,19	1/1:10,2:12:9.03:557,9,0	1/1:7,1:9:2.99:24,3,0	1/1:8,4:13:5.48:494,5,0	1/1:14,5:19:2.57:247,3,0	./.	1/1:10,0:18:2.76:54,3,0	1/1:8,0:14:2.97:214,3,0	0/0:20,0:18:40.67:0,41,3486	0/0:28,0:27:72.72:0,73,6340	1/1:8,1:7:3.01:249,3,0	0/0:9,3:11:0:0,0,0	0/0:30,0:26:3.01:0,3,266	./.	1/1:12,3:12:1.77:5,2,0	./.	./.	1/1:5,3:8:8.97:730,9,0	1/1:10,4:14:12.04:994,12,0	0/0:17,0:14:42.11:0,42,2670
chr10	95382983	.	AGT	A	2002.94	PASS	AB=1.000;AC=33;AF=0.635;AN=52;BaseQRankSum=-0.253;DP=522;FS=3.899;HRun=0;HaplotypeScore=142.7108;InbreedingCoeff=0.7010;MQ=40.43;MQ0=48;MQRankSum=-3.203;QD=6.36;ReadPosRankSum=1.223;VQSLOD=2.7986;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:7.74:0,8,87	0/0:13,0:11:7.75:0,8,45	./.	./.	0/0:15,0:13:5.81:0,6,49	1/1:22,0:21:6.32:132,6,0	1/1:16,0:16:5.08:49,5,0	1/1:10,9:17:41.49:453,41,0	0/0:19,0:19:11.95:0,12,92	1/1:18,0:18:36.25:234,36,0	1/1:12,1:13:8.98:73,9,0	1/1:14,0:14:12.80:89,13,0	1/1:31,0:29:18.25:125,18,0	1/1:21,0:21:8.66:60,9,0	0/0:23,0:22:8.94:0,9,70	0/0:19,0:17:10.17:0,10,66	0/0:11,0:10:12:0,12,306	0/0:25,0:24:42.21:0,42,810	1/1:11,1:12:22.51:198,23,0	1/1:13,0:13:2.26:25,2,0	1/1:16,0:15:5.53:49,6,0	1/1:21,0:20:8.68:75,9,0	0/1:10,0:9:8.17:39,0,8	1/1:28,0:27:2.94:23,3,0	0/0:14,0:14:8.94:0,9,81	1/1:23,0:20:44.17:278,44,0	1/1:28,0:28:25.57:204,26,0	1/1:8,2:10:9.86:82,10,0
chr10	95382986	.	GAGAGAGAGAGAGAA	G	1715.94	PASS	AB=1.000;AC=31;AF=0.620;AN=50;BaseQRankSum=5.758;DP=505;FS=5.330;HRun=0;HaplotypeScore=184.8197;InbreedingCoeff=0.3858;MQ=40.46;MQ0=48;MQRankSum=-2.716;QD=5.50;ReadPosRankSum=2.732;VQSLOD=2.4681;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:9.13:73,9,0	1/1:9,1:8:2.94:18,3,0	./.	./.	0/0:5,7:10:0.94:0,1,2	1/1:20,1:20:15.45:124,15,0	0/0:17,0:17:0.33:0,0,1	0/0:21,0:19:5.97:0,6,376	0/0:8,8:16:3.01:0,3,39	0/1:20,0:20:22.89:232,0,23	1/1:13,0:13:5.73:49,6,0	0/1:14,0:14:5.10:151,0,5	0/1:32,0:30:10.11:102,0,10	1/1:22,0:22:3.39:23,3,0	1/1:17,3:19:1.10:2,1,0	1/1:14,2:14:5.95:137,6,0	0/0:11,0:10:23.97:0,24,844	0/0:27,0:26:27.29:0,27,2391	1/1:9,0:9:2.38:133,2,0	1/1:13,0:13:4.20:28,4,0	1/1:16,0:15:2.75:24,3,0	1/1:21,0:20:2.60:24,3,0	1/1:10,0:9:5.90:41,6,0	0/0:27,0:26:2.60:0,3,75	./.	1/1:22,0:19:35.24:307,35,0	1/1:28,0:28:18.59:400,19,0	0/0:11,0:11:24.86:0,25,557
chr10	95382988	.	GAGAGAGAGAGAA	G	2289.62	PASS	AC=34;AF=0.680;AN=50;BaseQRankSum=6.033;DP=503;FS=0.671;HRun=0;HaplotypeScore=172.8516;InbreedingCoeff=0.5830;MQ=40.57;MQ0=48;MQRankSum=-2.901;QD=7.46;ReadPosRankSum=2.326;VQSLOD=2.5052;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:8.75:73,9,0	1/1:10,0:8:2.94:18,3,0	./.	./.	0/0:10,0:8:0.94:0,1,2	1/1:18,2:19:15.45:124,15,0	0/0:18,1:19:0.33:0,0,1	0/0:21,0:19:1.72:0,2,303	0/0:16,0:16:3.01:0,3,34	1/1:20,0:20:30.15:342,30,0	1/1:13,1:14:8.74:123,9,0	1/1:14,0:14:17.08:190,17,0	1/1:32,0:30:7.35:93,7,0	1/1:21,1:22:3.42:41,3,0	1/1:18,1:18:0.76:3,1,0	1/1:16,0:14:5.95:119,6,0	0/0:13,0:12:23.03:0,23,867	0/0:27,0:26:27.02:0,27,2043	1/1:9,0:9:23.46:245,23,0	1/1:13,0:13:4.09:27,4,0	1/1:14,0:14:2.41:24,2,0	1/1:22,0:21:2.59:24,3,0	1/1:8,0:7:6.01:65,6,0	0/0:28,0:27:2.61:0,3,59	./.	1/1:22,0:19:46.34:433,46,0	1/1:28,0:28:39.39:499,39,0	0/0:12,0:12:24.16:0,24,442
chr10	95382990	.	GAGAGAGAGAA	G	2669.65	PASS	AC=34;AF=0.680;AN=50;BaseQRankSum=5.683;DP=504;FS=0.633;HRun=0;HaplotypeScore=162.4224;InbreedingCoeff=0.6233;MQ=40.58;MQ0=48;MQRankSum=-2.411;QD=8.81;ReadPosRankSum=2.933;VQSLOD=2.2777;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:9.01:72,9,0	1/1:10,0:8:2.94:18,3,0	./.	./.	0/0:9,0:7:0.47:0,0,1	1/1:17,2:18:15.45:124,15,0	0/0:6,14:20:2.36:0,2,7	0/0:24,0:22:9.28:0,9,408	0/0:13,0:14:2.99:0,3,24	1/1:21,0:21:18.89:391,19,0	1/1:14,1:15:11.87:176,12,0	1/1:10,3:13:17.87:234,18,0	1/1:29,1:28:6.88:111,7,0	1/1:6,17:23:3.37:59,3,0	1/1:18,0:17:0.89:3,1,0	1/1:14,1:14:5.95:102,6,0	0/0:16,0:15:32.01:0,32,947	0/0:27,0:26:25.67:0,26,1694	1/1:9,0:9:26.80:260,27,0	1/1:14,0:14:7.08:53,7,0	1/1:14,0:14:2.10:24,2,0	1/1:22,0:21:2.03:24,2,0	1/1:7,1:7:6.01:81,6,0	0/0:2,26:27:2.77:0,3,38	./.	1/1:22,0:19:50.24:495,50,0	1/1:25,2:27:40.12:600,40,0	0/0:13,0:12:14.08:0,14,351
chr10	95382992	.	GAGAGAGAA	G	2747.76	PASS	AC=34;AF=0.680;AN=50;BaseQRankSum=5.409;DP=508;FS=0.000;HRun=0;HaplotypeScore=154.1102;InbreedingCoeff=0.6359;MQ=40.53;MQ0=50;MQRankSum=-2.950;QD=9.01;ReadPosRankSum=2.201;VQSLOD=2.5661;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:9.06:73,9,0	1/1:10,0:8:2.94:18,3,0	./.	./.	0/0:8,1:7:0:0,0,1	1/1:18,0:17:15.45:124,15,0	0/0:19,1:20:2.55:0,3,7	0/0:25,0:23:7.81:0,8,312	0/0:13,0:13:3:0,3,26	1/1:20,1:21:42.44:444,42,0	1/1:15,0:15:11.63:166,12,0	1/1:13,1:14:20.88:272,21,0	1/1:8,22:28:9.84:112,10,0	1/1:22,1:23:3.02:41,3,0	1/1:16,1:16:0.89:3,1,0	1/1:16,0:15:8.96:132,9,0	0/0:17,0:16:32.43:0,32,755	0/0:27,0:26:20.78:0,21,1343	1/1:10,0:9:26.87:252,27,0	1/1:12,2:14:6.45:76,6,0	1/1:14,0:14:2.23:24,2,0	1/1:4,18:21:2.28:24,2,0	1/1:8,1:8:8.99:102,9,0	0/0:28,0:27:2.82:0,3,20	./.	1/1:21,1:19:50.48:491,50,0	1/1:25,3:28:39.95:552,40,0	0/0:15,0:13:11.56:0,12,254
chr10	95382994	.	GAGAGAA	G	2784.18	PASS	AB=1.000;AC=36;AF=0.720;AN=50;BaseQRankSum=5.760;DP=505;FS=0.000;HRun=0;HaplotypeScore=143.1442;InbreedingCoeff=0.4950;MQ=40.32;MQ0=50;MQRankSum=-2.315;QD=8.02;ReadPosRankSum=1.151;VQSLOD=2.5842;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:9.20:73,9,0	1/1:10,0:8:2.94:18,3,0	./.	./.	0/0:8,1:7:0:0,0,1	1/1:19,0:18:15.45:124,15,0	0/1:19,0:19:0.35:0,0,0	0/1:26,0:24:7.78:8,0,227	0/0:13,0:13:2.94:0,3,18	1/1:17,2:19:45.42:448,45,0	1/1:15,0:15:14.84:170,15,0	1/1:14,1:15:23.87:259,24,0	1/1:29,0:27:9.37:93,9,0	1/1:21,1:22:3.03:59,3,0	1/1:16,1:16:0.64:2,1,0	1/1:15,1:15:8.95:92,9,0	0/0:17,0:16:12.09:0,12,589	0/0:27,0:26:3.23:0,3,1017	1/1:10,0:9:26.89:260,27,0	1/1:14,0:14:6.78:74,7,0	1/1:14,0:14:2.39:24,2,0	1/1:21,1:21:2.43:24,2,0	1/1:9,0:8:8.99:103,9,0	0/0:27,1:27:1.16:0,1,3	./.	1/1:19,2:18:50.55:530,51,0	1/1:24,5:29:43.05:557,43,0	0/0:15,0:13:6.83:0,7,177
chr10	95383141	.	A	ACAC	6038.38	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-10.550;DP=652;FS=0.411;HRun=0;HaplotypeScore=91.7588;InbreedingCoeff=0.9980;MQ=75.49;MQ0=0;MQRankSum=-2.309;QD=53.44;ReadPosRankSum=0.926;VQSLOD=7.0645;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,108,1712	1/1:0,8:8:18.06:397,18,0	0/0:19,0:19:45.08:0,45,653	0/0:13,0:13:33.11:0,33,530	1/1:2,10:12:27.09:554,27,0	0/0:31,0:31:84.29:0,84,1347	0/0:25,0:25:66.22:0,66,1061	0/0:32,0:31:93.32:0,93,1465	1/1:1,24:25:69.24:1520,69,0	0/0:20,0:20:54.18:0,54,846	0/0:12,0:12:36.12:0,36,579	0/0:19,0:19:51.13:0,51,791	0/0:37,0:34:93.30:0,93,1469	0/0:22,0:22:63.21:0,63,1012	1/1:4,27:32:75.26:1648,75,0	1/1:1,18:20:51.18:1125,51,0	0/0:32,0:32:87.30:0,87,1396	0/0:27,0:27:75.24:0,75,1181	0/0:21,0:21:54.17:0,54,834	0/0:11,0:11:33.10:0,33,503	0/0:52,0:52:99:0,147,2328	0/0:20,0:20:57.18:0,57,883	0/0:19,0:19:57.19:0,57,914	0/0:26,0:26:69.24:0,69,1109	1/1:3,13:16:36.12:794,36,0	0/0:15,0:15:36.12:0,36,578	0/0:29,0:28:87.28:0,87,1375	0/0:13,0:13:39.13:0,39,627
chr10	95383562	.	TGTCATCCTA	T	1890.56	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.603;DP=628;FS=0.779;HRun=0;HaplotypeScore=169.3881;InbreedingCoeff=0.9672;MQ=88.85;MQ0=0;MQRankSum=-5.645;QD=57.29;ReadPosRankSum=-2.467;VQSLOD=2.7671;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.33:0,96,4295	0/0:14,0:14:42.14:0,42,2033	0/0:28,0:29:78.20:0,78,2960	0/0:27,0:27:75.22:0,75,3128	0/0:17,0:17:42.14:0,42,1969	0/0:21,0:21:54.19:0,54,2447	0/0:22,0:22:66.23:0,66,3038	1/1:9,21:30:63.19:1729,63,0	0/0:27,0:27:81.28:0,81,3789	0/0:24,0:24:72.25:0,72,3482	0/0:16,0:16:42.14:0,42,1945	0/0:23,0:23:66.23:0,66,3007	0/0:26,0:26:78.27:0,78,3629	0/0:18,0:18:54.19:0,54,2543	0/0:27,0:27:81.28:0,81,3783	0/0:25,0:25:75.24:0,75,3369	0/0:22,0:22:63.22:0,63,2883	0/0:22,0:21:63.22:0,63,2851	0/0:23,0:23:63.22:0,63,2995	0/0:7,0:7:21.07:0,21,1022	0/0:31,0:31:93.30:0,93,4308	0/0:23,0:23:63.22:0,63,3009	0/0:21,0:21:63.22:0,63,2964	0/0:30,0:30:87.30:0,87,4134	0/0:17,0:17:48.16:0,48,2271	0/0:26,0:26:69.23:0,69,3145	0/0:24,0:24:69.22:0,69,2870	1/1:0,3:3:9.03:276,9,0
chr10	95384035	.	CA	C	1733.67	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=2.175;DP=432;FS=1.595;HRun=10;HaplotypeScore=79.9597;InbreedingCoeff=0.9591;MQ=57.12;MQ0=5;MQRankSum=-0.299;QD=17.34;ReadPosRankSum=2.509;VQSLOD=4.3560;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,132,1423	1/1:0,4:4:12:104,12,0	0/0:7,0:4:9.58:0,10,64	0/0:8,0:4:7.83:0,8,67	1/1:2,9:11:23.83:196,24,0	0/0:16,0:16:39.08:0,39,415	0/0:15,0:15:30.04:0,30,318	1/1:6,14:19:47.98:415,48,0	1/1:4,13:17:32.98:286,33,0	0/0:9,0:9:15:0,15,152	0/0:7,0:7:11.99:0,12,119	0/0:19,0:19:42.05:0,42,434	0/0:18,0:18:33.08:0,33,357	0/0:21,0:21:57.08:0,57,593	1/1:3,14:17:38.99:339,39,0	1/1:1,13:15:29.98:260,30,0	0/0:21,0:21:51.13:0,51,560	0/0:25,0:25:60.12:0,60,643	0/0:18,0:18:42.10:0,42,450	0/0:15,0:15:33.09:0,33,365	0/0:10,0:10:24.06:0,24,265	0/0:8,0:8:15.03:0,15,159	0/0:14,0:14:24.06:0,24,266	0/0:20,0:20:45.05:0,45,468	1/1:1,9:10:23.99:208,24,0	0/0:13,0:13:33.08:0,33,359	0/0:17,0:17:33.02:0,33,337	1/1:1,5:6:15:130,15,0
chr10	95384063	.	T	TG	2588.73	PASS	AB=0.856;AC=28;AF=0.500;AN=56;BaseQRankSum=-0.021;DP=402;FS=0.000;HRun=8;HaplotypeScore=90.2696;InbreedingCoeff=0.4649;MQ=69.72;MQ0=0;MQRankSum=-1.262;QD=10.79;ReadPosRankSum=-2.892;VQSLOD=1.9944;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:34.34:0,34,325	0/0:6,0:6:11.61:0,12,65	0/1:7,0:5:0.22:0,0,36	0/1:16,2:17:27.10:27,0,81	0/0:9,0:9:7.55:0,8,92	0/1:7,12:19:9.52:201,0,10	1/1:5,9:14:2.98:219,3,0	0/1:18,0:18:0.11:0,0,0	0/0:17,0:17:30.74:0,31,174	0/0:6,1:7:2.90:0,3,16	1/1:5,5:10:15.04:169,15,0	0/1:11,5:16:9.86:230,0,10	1/1:2,8:10:24.07:274,24,0	1/1:10,10:20:0.38:245,0,0	0/0:14,0:14:20.43:0,20,122	0/0:16,0:16:40.94:0,41,250	0/0:22,0:22:60.03:0,60,548	0/0:24,0:24:63.03:0,63,577	0/1:11,2:13:2.85:79,0,3	1/1:8,7:15:18.88:192,19,0	1/1:7,10:17:30.03:319,30,0	0/1:7,5:12:12.57:110,0,13	1/1:0,5:5:9.03:103,9,0	1/1:4,11:15:15.71:294,16,0	0/0:8,0:8:20.35:0,20,115	1/1:7,3:10:3.48:35,3,0	1/1:2,11:14:24.07:274,24,0	0/1:7,0:7:0.14:0,0,0
chr10	95384071	.	GC	G	2196.71	PASS	AB=0.966;AC=36;AF=0.643;AN=56;BaseQRankSum=1.940;DP=351;FS=0.000;HRun=1;HaplotypeScore=70.2104;InbreedingCoeff=0.3561;MQ=74.94;MQ0=0;MQRankSum=-2.460;QD=8.29;ReadPosRankSum=-3.941;VQSLOD=-0.6129;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,2:32:99:128,0,126	0/1:6,0:6:17.15:22,0,17	0/0:9,0:8:14.19:0,14,191	0/0:21,0:20:34.18:0,34,456	0/1:6,1:7:24.21:24,0,39	1/1:15,1:16:3.30:71,3,0	1/1:16,0:16:19.40:159,19,0	1/1:0,17:17:50.77:529,51,0	0/1:17,0:17:39.67:40,0,58	0/0:3,0:3:2.22:0,2,7	1/1:9,0:9:16.70:89,17,0	0/1:11,0:11:0.23:75,0,0	1/1:9,0:9:20.95:92,21,0	1/1:14,0:14:15.83:109,16,0	0/1:9,1:10:18.10:18,0,43	0/1:17,0:17:5.73:6,0,99	0/0:24,0:24:69.16:0,69,915	0/0:22,0:22:66.18:0,66,916	1/1:9,0:9:12.46:110,12,0	1/1:8,1:9:20.92:128,21,0	1/1:14,0:14:34.04:204,34,0	0/1:9,0:9:8.93:22,0,9	1/1:5,0:5:8.56:43,9,0	1/1:13,0:13:25.97:120,26,0	0/0:7,0:7:15.91:0,16,57	1/1:6,0:6:12.30:86,12,0	1/1:15,0:15:27.76:142,28,0	1/1:0,4:4:12.04:167,12,0
chr10	95384250	.	T	TGG	136.03	PASS	AB=0.951;AC=9;AF=0.167;AN=54;BaseQRankSum=-1.174;DP=596;FS=49.304;HRun=0;HaplotypeScore=73.0207;InbreedingCoeff=-0.2010;MQ=32.01;MQ0=266;MQRankSum=5.179;QD=0.60;ReadPosRankSum=0.451;VQSLOD=-0.3644;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:13:14.69:0,15,98	0/0:6,0:4:11.22:0,11,56	./.	0/0:23,0:2:5.42:0,5,25	0/0:10,0:6:1.55:0,2,29	0/1:13,0:8:22.99:23,0,33	0/0:19,0:14:23.06:0,23,210	0/0:36,0:22:14.63:0,15,180	0/0:6,0:3:2.99:0,3,23	0/1:13,0:6:9.57:56,0,10	0/1:16,0:8:4.98:5,0,113	0/0:18,0:7:8.43:0,8,57	0/0:12,0:5:4.35:0,4,17	0/0:17,0:12:10.72:0,11,186	0/0:16,0:10:13.85:0,14,139	0/0:15,0:10:17.94:0,18,159	0/0:41,0:27:65.72:0,66,736	0/0:39,0:25:66.20:0,66,813	0/1:94,0:17:74.11:74,0,162	0/0:15,0:10:0.15:0,0,60	0/0:30,0:7:14.31:0,14,98	0/1:2,6:8:9.68:10,0,11	0/1:7,0:4:4.72:5,0,79	0/1:23,0:14:2.51:3,0,41	0/0:13,0:5:6.74:0,7,51	0/1:20,0:12:47.25:62,0,47	0/0:21,0:15:24.18:0,24,193	0/1:30,0:7:21.45:21,0,52
chr10	95384917	.	CT	C	6759.10	PASS	AB=0.625;AC=43;AF=0.768;AN=56;BaseQRankSum=4.989;DP=542;FS=10.731;HRun=12;HaplotypeScore=62.9508;InbreedingCoeff=0.7960;MQ=69.02;MQ0=0;MQRankSum=0.707;QD=15.09;ReadPosRankSum=3.159;VQSLOD=5.1025;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,35:46:87.82:677,88,0	1/1:0,7:7:17.93:139,18,0	0/0:10,1:11:0.80:0,1,166	0/0:4,0:4:8.99:0,9,76	1/1:5,17:22:44.76:348,45,0	1/1:3,13:17:4.50:208,4,0	0/1:8,12:20:17.76:196,0,18	0/0:18,0:18:33.95:0,34,336	1/1:3,16:19:47.78:371,48,0	1/1:6,14:20:41.80:325,42,0	1/1:4,10:14:23.85:185,24,0	1/1:3,19:22:44.80:348,45,0	1/1:2,11:13:29.88:232,30,0	1/1:6,12:18:26.84:209,27,0	1/1:7,19:28:48.85:360,49,0	1/1:6,17:23:11.23:271,11,0	0/0:27,1:29:39.59:0,40,546	0/0:19,0:20:38.22:0,38,413	1/1:5,10:15:26.84:206,27,0	1/1:5,16:21:9.07:236,9,0	1/1:5,13:19:31.87:238,32,0	1/1:3,10:13:23.86:186,24,0	1/1:2,13:15:32.14:254,32,0	1/1:2,19:22:58.80:447,59,0	1/1:5,16:21:41.40:324,41,0	1/1:3,24:27:65.68:510,66,0	1/1:2,23:26:62.73:487,63,0	0/0:12,0:12:33.07:0,33,335
chr10	95385720	.	G	GTCCA	15849.11	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=6.779;DP=747;FS=6.182;HRun=0;HaplotypeScore=160.7083;InbreedingCoeff=0.7117;MQ=66.08;MQ0=0;MQRankSum=-3.270;QD=23.94;ReadPosRankSum=2.529;VQSLOD=4.1553;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,19:36:37.08:859,37,0	1/1:6,0:6:3.47:26,3,0	0/0:26,0:20:48.88:0,49,801	0/0:22,0:18:48.02:0,48,717	1/1:10,1:33:34.06:450,34,0	1/1:17,8:25:34.39:718,34,0	1/1:7,14:21:8.97:215,9,0	0/1:40,0:40:99:188,0,916	1/1:8,1:28:30.51:472,31,0	1/1:13,19:32:43.20:973,43,0	1/1:11,11:23:21.48:470,21,0	1/1:6,19:26:21.17:644,21,0	1/1:6,18:26:36.12:853,36,0	1/1:3,22:25:53.65:1282,54,0	1/1:11,4:39:46.77:697,47,0	1/1:9,0:24:28.18:519,28,0	0/0:18,0:18:51.04:0,51,861	0/0:19,0:19:57.11:0,57,954	1/1:25,5:30:28.85:483,29,0	1/1:13,16:30:26.58:485,27,0	1/1:8,18:27:25.44:636,25,0	1/1:14,23:38:60.75:1484,61,0	1/1:5,10:18:24.08:571,24,0	1/1:7,23:30:33.11:780,33,0	1/1:9,0:22:36.12:592,36,0	1/1:8,25:33:57.48:1413,57,0	1/1:4,25:30:38.59:919,39,0	0/1:19,0:19:99:123,0,386
chr10	95385724	.	G	GTCCATCCA	16369.46	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=5.262;DP=726;FS=2.183;HRun=0;HaplotypeScore=204.3829;InbreedingCoeff=0.8260;MQ=63.14;MQ0=0;MQRankSum=-0.516;QD=25.70;ReadPosRankSum=2.397;VQSLOD=4.6902;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:45.06:608,45,0	1/1:7,0:7:6:75,6,0	0/0:26,0:20:14.90:0,15,138	0/0:23,0:19:20.96:0,21,260	1/1:29,0:29:27.05:931,27,0	1/1:27,0:26:36.04:552,36,0	1/1:21,0:21:9.02:100,9,0	1/1:38,0:38:60.11:996,60,0	1/1:23,0:23:30.10:1085,30,0	1/1:31,0:31:48.12:638,48,0	1/1:22,0:22:21.07:292,21,0	1/1:23,0:24:27.09:362,27,0	1/1:25,0:25:36.11:486,36,0	1/1:25,0:25:54.18:760,54,0	1/1:35,0:35:51.11:1666,51,0	1/1:24,0:24:38.77:1294,39,0	0/0:20,0:20:45.02:0,45,917	0/0:20,0:20:39.10:0,39,853	1/1:30,0:31:24.01:275,24,0	1/1:27,0:27:26.96:302,27,0	0/1:26,0:26:14.54:377,0,15	1/1:39,0:39:66.14:849,66,0	1/1:17,0:17:33.01:385,33,0	1/1:30,0:30:33.11:485,33,0	1/1:19,0:19:39.12:1420,39,0	1/1:32,0:32:66.20:931,66,0	1/1:30,0:30:45.06:643,45,0	1/1:11,8:20:21.07:858,21,0
chr10	95386758	.	T	TCC	7068.96	PASS	AB=0.579;AC=47;AF=0.839;AN=56;BaseQRankSum=7.307;DP=484;FS=40.490;HRun=9;HaplotypeScore=110.3965;InbreedingCoeff=0.7828;MQ=82.90;MQ0=0;MQRankSum=-5.312;QD=18.95;ReadPosRankSum=-2.913;VQSLOD=0.2142;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,14:27:27.52:389,28,0	1/1:2,3:5:8.44:135,8,0	0/0:19,0:19:35.77:0,36,337	0/0:16,0:16:20.46:0,20,257	1/1:8,8:16:18.32:277,18,0	1/1:5,8:14:15.01:204,15,0	1/1:3,22:28:62.02:858,62,0	1/1:7,4:13:8.52:101,9,0	1/1:6,10:18:26.58:370,27,0	1/1:5,5:10:17.52:215,18,0	1/1:6,3:9:8.99:111,9,0	1/1:5,9:16:20.04:241,20,0	1/1:7,12:20:26.58:378,27,0	1/1:6,9:16:21.07:313,21,0	1/1:4,10:15:26.58:378,27,0	1/1:3,7:10:15.52:224,16,0	0/0:43,0:43:99:0,102,1085	0/0:31,0:33:83.89:0,84,873	1/1:5,6:15:31.56:376,32,0	0/1:3,6:11:11.20:167,0,11	1/1:18,12:36:39.28:464,39,0	1/1:5,5:10:11.26:183,11,0	1/1:4,1:7:5.51:55,6,0	1/1:2,19:24:32.06:432,32,0	1/1:5,9:14:24.08:368,24,0	1/1:6,7:14:23:225,23,0	1/1:13,6:19:30.99:395,31,0	1/1:4,2:6:15.04:208,15,0
chr10	95387706	.	GC	G	15480.49	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=8.273;DP=637;FS=0.373;HRun=4;HaplotypeScore=68.0336;InbreedingCoeff=0.9868;MQ=82.95;MQ0=0;MQRankSum=-3.475;QD=30.72;ReadPosRankSum=3.987;VQSLOD=5.1376;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,41:43:99:1222,102,0	1/1:0,9:9:27.08:323,27,0	0/0:20,0:20:55.01:0,55,733	0/0:15,0:15:10.02:0,10,262	1/1:0,14:14:42.09:487,42,0	1/1:0,23:23:63.19:755,63,0	1/1:2,31:33:84.26:1007,84,0	0/0:23,0:23:60.16:0,60,752	1/1:1,20:21:51.16:611,51,0	1/1:2,21:23:63.18:743,63,0	1/1:0,5:5:15.05:180,15,0	1/1:4,23:27:66.20:791,66,0	1/1:1,22:23:63.19:755,63,0	1/1:2,18:20:54.17:648,54,0	1/1:1,24:25:57.17:684,57,0	1/1:2,23:25:63.19:754,63,0	0/0:37,0:37:99:0,108,1483	0/0:24,0:24:72.23:0,72,987	1/1:0,18:18:54.15:627,54,0	1/1:0,14:14:33.10:395,33,0	1/1:5,51:56:99:1654,138,0	1/1:1,20:21:54.17:647,54,0	1/1:0,13:13:33.10:394,33,0	1/1:0,28:28:72.22:863,72,0	1/1:3,19:22:51.16:611,51,0	1/1:3,19:22:57.17:680,57,0	1/1:1,18:19:54.17:647,54,0	0/0:14,0:14:39.13:0,39,544
chr10	95389068	.	CA	C	281.64	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=-0.663;DP=235;FS=7.525;HRun=1;HaplotypeScore=48.5804;InbreedingCoeff=0.5798;MQ=84.63;MQ0=1;MQRankSum=-3.482;QD=28.16;ReadPosRankSum=1.383;VQSLOD=2.8739;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:27.09:375,27,0	./.	0/0:13,0:8:18.42:0,18,200	0/0:12,0:10:14.98:0,15,164	0/0:5,0:5:12:0,12,122	0/0:8,0:8:24.06:0,24,322	0/0:19,0:19:54.14:0,54,725	0/0:7,0:7:18.05:0,18,247	0/0:5,0:5:14.87:0,15,174	0/0:8,0:8:18.52:0,19,264	0/0:1,0:1:2.90:0,3,16	0/0:11,0:11:33.07:0,33,457	0/0:17,0:17:47.78:0,48,608	0/0:16,0:16:45.15:0,45,635	0/0:9,0:9:13.79:0,14,166	0/0:5,0:5:15.03:0,15,210	0/0:9,0:9:27.05:0,27,379	0/0:12,0:12:36.03:0,36,474	0/0:4,0:3:12.03:0,12,163	0/0:3,0:3:9.03:0,9,125	0/0:3,0:3:9.02:0,9,117	0/0:18,0:18:51.15:0,51,696	0/0:8,0:8:24.06:0,24,336	0/0:13,0:13:33.11:0,33,451	0/0:7,0:7:21.04:0,21,258	0/0:1,0:1:3.01:0,3,48	0/0:8,0:8:23.27:0,23,252	0/0:3,0:3:9.03:0,9,144
chr10	95389075	.	TG	T	3575.94	PASS	AB=0.750;AC=39;AF=0.750;AN=52;BaseQRankSum=3.346;DP=228;FS=1.717;HRun=8;HaplotypeScore=42.6920;InbreedingCoeff=0.6760;MQ=83.21;MQ0=1;MQRankSum=-0.376;QD=20.20;ReadPosRankSum=2.420;VQSLOD=3.4527;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,4:11:21.02:198,21,0	./.	0/0:12,0:6:6.43:0,6,44	0/0:13,0:10:8.43:0,8,51	1/1:2,2:4:3:29,3,0	1/1:0,10:10:27.04:260,27,0	1/1:3,17:20:42.05:405,42,0	0/0:4,0:4:9.03:0,9,108	1/1:1,6:7:8.60:87,9,0	1/1:1,7:8:20.99:190,21,0	./.	1/1:2,9:11:27.04:260,27,0	1/1:3,13:16:42.05:401,42,0	1/1:1,16:17:39.06:376,39,0	1/1:2,5:7:5.51:49,6,0	1/1:2,2:4:3:29,3,0	0/0:8,0:8:24.07:0,24,290	0/0:9,0:9:21.05:0,21,240	1/1:1,2:3:6.01:58,6,0	1/1:2,1:3:6.01:58,6,0	0/1:2,1:3:17.53:23,0,18	1/1:4,12:16:36.06:347,36,0	1/1:3,6:9:15.02:145,15,0	1/1:1,13:14:30.05:289,30,0	1/1:1,4:5:15.02:145,15,0	1/1:2,0:2:3:25,3,0	1/1:0,7:7:21.03:202,21,0	0/0:5,0:5:8.97:0,9,80
chr10	95389083	.	GT	G	562.41	PASS	AB=0.991;AC=27;AF=0.519;AN=52;BaseQRankSum=8.660;DP=238;FS=2.800;HRun=1;HaplotypeScore=49.7467;InbreedingCoeff=0.0645;MQ=88.41;MQ0=1;MQRankSum=0.187;QD=2.93;ReadPosRankSum=7.025;VQSLOD=-0.4446;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,1:8:5.98:52,0,6	./.	0/0:11,1:7:7.74:0,8,57	0/1:16,0:13:3.37:3,0,28	0/1:4,0:4:0.22:0,0,19	0/1:11,0:11:3.75:33,0,4	0/1:21,0:21:47.55:51,0,48	0/0:6,0:6:18.01:0,18,177	1/1:6,0:6:5.18:16,5,0	0/1:8,0:8:11.80:17,0,12	./.	1/1:10,0:10:17.78:58,18,0	1/1:16,1:17:1.81:90,2,0	0/1:18,0:18:9.31:42,0,9	0/1:7,0:7:16.70:28,0,17	0/1:4,0:4:5.27:5,0,41	0/0:9,0:9:27.06:0,27,314	0/0:7,0:7:17.97:0,18,193	0/1:5,0:5:9.52:10,0,42	1/1:1,1:2:5.68:41,6,0	0/0:7,0:7:8.77:0,9,89	1/1:14,1:15:5.04:93,5,0	0/1:7,0:7:3.47:35,0,3	0/1:16,0:16:37.54:46,0,38	1/1:4,1:5:10.50:46,11,0	0/1:5,0:5:3.69:4,0,45	1/1:7,0:7:15.22:53,15,0	0/0:3,0:3:9.03:0,9,111
chr10	95390277	.	ATC	A	2584.35	PASS	AB=0.983;AC=29;AF=0.518;AN=56;BaseQRankSum=10.841;DP=541;FS=13.787;HRun=0;HaplotypeScore=101.0686;InbreedingCoeff=0.0241;MQ=76.52;MQ0=4;MQRankSum=-2.845;QD=6.71;ReadPosRankSum=9.396;VQSLOD=0.7807;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:51.05:0,51,575	1/1:12,0:12:25.78:102,26,0	0/0:30,0:20:49.33:0,49,526	0/0:22,0:13:0.49:0,0,240	0/1:17,1:18:15.91:115,0,16	0/1:15,0:15:14.78:71,0,15	0/1:26,0:26:38.79:135,0,39	0/0:12,0:12:36.05:0,36,411	0/1:25,0:25:12.50:156,0,12	0/1:17,0:17:67.21:99,0,67	0/1:6,1:7:9.26:50,0,9	1/1:12,0:12:4.80:92,5,0	0/1:16,0:16:2.06:128,0,2	1/1:22,1:23:10.09:226,10,0	0/1:18,0:17:32.03:100,0,32	1/1:13,0:13:27.56:109,28,0	0/0:37,0:37:99:0,111,1973	0/0:26,0:26:78.19:0,78,1414	0/1:16,0:16:37.49:53,0,37	0/1:16,0:16:28.12:114,0,28	0/1:28,0:28:57.33:150,0,57	1/1:19,1:20:9.67:301,10,0	0/1:24,0:24:24.73:122,0,25	1/1:15,0:15:12.03:106,12,0	1/1:19,0:19:13.21:173,13,0	1/1:19,0:19:45.18:212,45,0	0/1:25,1:26:32.14:152,0,32	0/0:5,0:5:6.02:0,6,82
chr10	95390278	.	TCC	T	10064.82	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=2.877;DP=541;FS=32.149;HRun=10;HaplotypeScore=76.9878;InbreedingCoeff=0.9724;MQ=75.62;MQ0=4;MQRankSum=-1.968;QD=26.35;ReadPosRankSum=3.779;VQSLOD=2.6573;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:24:36.03:0,36,351	1/1:0,12:12:33.05:354,33,0	0/0:28,0:19:26.85:0,27,321	0/0:23,0:13:24.04:0,24,211	1/1:2,16:18:42.10:468,42,0	1/1:2,13:15:33.07:368,33,0	1/1:4,22:26:57.14:635,57,0	0/0:9,0:14:17.47:0,17,179	1/1:3,22:25:60.15:669,60,0	1/1:2,13:15:39.07:424,39,0	1/1:2,5:7:12.03:134,12,0	1/1:2,10:12:30.08:331,30,0	1/1:2,14:16:39.10:435,39,0	1/1:3,20:23:57.15:635,57,0	1/1:3,14:17:39.09:434,39,0	1/1:0,13:13:33.09:368,33,0	0/0:37,0:37:96.25:0,96,1448	0/0:25,0:26:71.70:0,72,1054	1/1:2,14:16:39.07:426,39,0	1/1:2,14:16:28.45:376,28,0	1/1:5,23:28:60.14:669,60,0	1/1:4,16:20:54.14:598,54,0	1/1:4,20:24:48.11:535,48,0	1/1:1,14:15:39.10:435,39,0	1/1:1,18:19:42.11:468,42,0	1/1:0,19:19:57.15:635,57,0	1/1:5,21:26:60.12:669,60,0	0/0:0,0:4:6.01:0,6,57
chr10	95390843	.	G	GT	11660.43	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-7.542;DP=703;FS=0.000;HRun=9;HaplotypeScore=72.3983;InbreedingCoeff=0.9802;MQ=62.91;MQ0=5;MQRankSum=2.055;QD=20.82;ReadPosRankSum=5.499;VQSLOD=5.0383;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,2:49:83.36:404,83,0	1/1:1,4:5:9.02:99,9,0	0/0:18,0:12:12.15:0,12,164	0/0:23,0:17:29.81:0,30,236	1/1:2,25:28:36.07:640,36,0	1/1:6,17:23:22.08:472,22,0	1/1:3,22:25:63.17:697,63,0	0/0:35,0:35:68.66:0,69,598	1/1:2,21:23:41.95:445,42,0	1/1:6,30:37:90.02:949,90,0	1/1:0,15:16:38.94:396,39,0	1/1:6,18:25:47.96:512,48,0	1/1:2,21:24:22.49:444,22,0	1/1:6,20:26:39.11:431,39,0	1/1:3,12:15:27.07:299,27,0	1/1:3,22:25:54.14:595,54,0	0/0:22,0:22:47.98:0,48,416	0/0:25,2:27:38.81:0,39,565	1/1:9,16:24:50.96:539,51,0	1/1:4,18:22:56.88:572,57,0	1/1:3,16:19:36.10:398,36,0	1/1:1,24:26:45.99:676,46,0	1/1:2,16:19:44.95:478,45,0	1/1:5,37:43:93.08:1010,93,0	1/1:5,15:20:33.09:365,33,0	1/1:11,24:34:71.99:757,72,0	1/1:5,21:27:27.05:482,27,0	0/0:16,0:16:35.96:0,36,312
chr10	95390985	.	TTTGTTG	T	4209.53	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.141;DP=737;FS=13.100;HRun=0;HaplotypeScore=146.9686;InbreedingCoeff=0.9902;MQ=64.47;MQ0=7;MQRankSum=-11.001;QD=34.79;ReadPosRankSum=1.234;VQSLOD=2.8550;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,129,3386	1/1:4,6:10:12.04:236,12,0	0/0:32,0:16:15.02:0,15,246	0/0:42,0:27:42.30:0,42,603	1/1:3,22:25:39.10:725,39,0	0/0:23,0:23:57.18:0,57,1760	0/0:23,0:23:45.15:0,45,1137	0/0:40,0:40:87.28:0,87,1953	1/1:2,15:17:36.12:780,36,0	0/0:37,0:37:93.31:0,93,2568	0/0:23,0:23:57.20:0,57,1778	0/0:24,0:24:57.20:0,57,1692	0/0:24,0:24:66.21:0,66,1878	0/0:17,0:17:45.15:0,45,1290	1/1:2,20:22:36.12:780,36,0	1/1:4,22:25:51.18:1105,51,0	0/0:31,0:31:78.27:0,78,2308	0/0:27,0:27:72.25:0,72,2110	0/0:19,0:16:42.14:0,42,1071	0/0:29,0:28:72.24:0,72,1674	0/0:26,0:26:66.23:0,66,1717	0/0:19,0:19:42.11:0,42,1120	0/0:22,0:22:63.20:0,63,1863	0/0:30,0:30:75.21:0,75,2167	1/1:4,17:21:27.09:584,27,0	0/0:29,0:29:87.19:0,87,2508	0/0:28,0:28:81.28:0,81,2290	0/0:22,0:22:54.19:0,54,1571
chr10	95391257	.	CG	C	2321.98	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=16.681;DP=752;FS=6.588;HRun=1;HaplotypeScore=137.0279;InbreedingCoeff=0.9996;MQ=76.37;MQ0=1;MQRankSum=-5.200;QD=14.07;ReadPosRankSum=3.223;VQSLOD=3.2446;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,9:38:72.61:417,73,0	1/1:9,6:15:39.13:291,39,0	0/0:19,0:19:35.23:0,35,747	0/0:21,0:21:50.02:0,50,688	1/1:9,5:14:28.70:232,29,0	0/0:20,0:20:60.20:0,60,944	0/0:34,0:33:96.31:0,96,1498	0/0:36,0:36:99:0,108,1627	1/1:16,5:21:43.25:322,43,0	0/0:24,0:24:72.24:0,72,1130	0/0:16,0:16:45.15:0,45,705	0/0:30,0:30:86.49:0,86,1300	0/0:37,0:37:99:0,108,1607	0/0:27,0:27:81.27:0,81,1261	1/1:20,14:34:83.41:578,83,0	1/1:14,12:26:60.53:347,61,0	0/0:35,0:35:99:0,105,1600	0/0:26,0:26:75.26:0,75,1187	0/0:16,0:16:48.08:0,48,705	0/0:25,0:25:75.26:0,75,1197	0/0:64,0:63:99:0,171,2618	0/0:26,0:26:77.41:0,77,1157	0/0:16,0:16:48.14:0,48,717	0/0:50,0:50:99:0,129,2006	1/1:13,4:17:42.62:333,43,0	0/0:25,0:25:72.25:0,72,1145	0/0:26,0:26:78.19:0,78,1130	0/0:14,0:14:27.09:0,27,430
chr10	95391262	.	G	GA	3508.13	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=17.270;DP=749;FS=10.642;HRun=3;HaplotypeScore=137.0328;InbreedingCoeff=0.9990;MQ=78.05;MQ0=1;MQRankSum=-7.640;QD=22.06;ReadPosRankSum=2.665;VQSLOD=2.2732;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,10:36:72.20:564,72,0	1/1:8,6:14:41.35:390,41,0	0/0:23,0:23:57.17:0,57,753	0/0:21,0:21:22.72:0,23,652	1/1:9,3:12:28.82:260,29,0	0/0:21,0:21:60.18:0,60,820	0/0:35,0:34:99:0,99,1377	0/0:36,0:36:99:0,105,1425	1/1:16,7:23:63.22:593,63,0	0/0:26,0:26:78.26:0,78,1091	0/0:20,0:20:54.16:0,54,719	0/0:29,0:29:84.28:0,84,1166	0/0:38,0:38:99:0,102,1385	0/0:30,0:30:84.26:0,84,1155	1/1:17,13:30:84.67:749,85,0	1/1:14,13:27:66.93:541,67,0	0/0:36,0:36:99:0,108,1506	0/0:25,0:25:75.25:0,75,1047	0/0:14,0:14:42.14:0,42,583	0/0:26,0:26:75.25:0,75,1049	0/0:60,0:59:99:0,159,2219	0/0:25,0:25:72.24:0,72,1006	0/0:14,0:14:42.11:0,42,551	0/0:50,0:50:99:0,141,1917	1/1:13,4:17:41.48:411,41,0	0/0:24,0:24:72.24:0,72,997	0/0:24,0:24:69.21:0,69,945	0/0:13,0:13:24.05:0,24,316
chr10	95391303	.	A	AACAC	245.68	PASS	AB=0.974;AC=9;AF=0.167;AN=54;BaseQRankSum=3.941;DP=745;FS=0.730;HRun=0;HaplotypeScore=231.0506;InbreedingCoeff=0.3178;MQ=62.58;MQ0=4;MQRankSum=-1.696;QD=1.36;ReadPosRankSum=-5.553;VQSLOD=1.1362;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,20:33:6.01:144,6,0	./.	0/1:28,0:16:22.78:23,0,428	0/0:31,0:21:37.17:0,37,611	0/0:13,0:13:9.01:0,9,86	0/0:24,0:24:17.11:0,17,658	0/0:33,0:32:53.98:0,54,839	0/1:23,0:27:4.22:128,0,4	0/1:25,0:25:5.84:6,0,308	0/0:23,0:23:37.19:0,37,868	0/0:15,0:15:33.11:0,33,568	0/0:35,0:34:47.74:0,48,771	0/0:37,0:37:75.16:0,75,1201	0/0:32,0:32:69.07:0,69,1162	0/1:28,0:28:7.95:8,0,100	0/1:26,0:26:45.35:45,0,186	0/0:44,0:44:99:0,111,1884	0/0:28,0:28:78.16:0,78,1298	0/0:12,0:12:18.06:0,18,313	0/0:23,0:23:29.89:0,30,493	0/0:65,0:64:83.46:0,83,1393	0/0:20,0:20:38.88:0,39,612	0/0:12,0:12:29.99:0,30,490	0/0:37,0:37:63.69:0,64,1105	0/0:15,0:15:14.89:0,15,126	0/0:30,0:30:75.26:0,75,1277	0/0:25,0:25:57.17:0,57,994	1/1:6,0:13:5.60:25,6,0
chr10	95391360	.	G	GCA	4249.95	PASS	AB=1.000;AC=28;AF=0.583;AN=48;BaseQRankSum=3.502;DP=518;FS=11.483;HRun=0;HaplotypeScore=121.0030;InbreedingCoeff=0.6860;MQ=40.91;MQ0=26;MQRankSum=-5.472;QD=13.98;ReadPosRankSum=0.880;VQSLOD=4.0055;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:0:0,0,0	./.	0/1:37,0:6:5.34:5,0,161	0/0:37,0:2:6.02:0,6,79	0/0:13,0:13:9:0,9,95	1/1:5,13:17:8.62:141,9,0	1/1:6,12:17:9.45:111,9,0	1/1:7,24:30:78.16:1135,78,0	0/0:12,0:12:12.57:0,13,187	1/1:9,9:16:4.11:544,4,0	./.	1/1:5,12:17:3.01:52,3,0	1/1:12,9:21:22.84:367,23,0	1/1:5,10:14:12.01:189,12,0	0/0:14,0:12:3.01:0,3,32	0/0:12,0:11:18:0,18,209	0/0:33,0:33:90.20:0,90,1129	0/0:29,0:29:75.01:0,75,907	1/1:10,2:7:9.03:156,9,0	./.	1/1:27,24:49:20.06:273,20,0	./.	1/1:5,5:9:6:65,6,0	0/0:16,4:20:2.54:0,3,12	0/0:11,0:11:12.04:0,12,153	1/1:1,20:23:51.42:852,51,0	1/1:2,11:13:15.05:257,15,0	1/1:1,3:4:6.02:104,6,0
chr10	95391366	.	ACG	A	361.65	PASS	AB=0.945;AC=22;AF=0.407;AN=54;BaseQRankSum=4.081;DP=479;FS=35.354;HRun=0;HaplotypeScore=121.0958;InbreedingCoeff=0.1932;MQ=39.90;MQ0=23;MQRankSum=-1.366;QD=1.30;ReadPosRankSum=-1.477;VQSLOD=0.4667;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:0:0,0,0	0/1:4,0:4:0:0,0,0	0/0:30,0:6:17.97:0,18,240	0/0:37,0:2:6.02:0,6,114	0/0:12,0:12:8.94:0,9,65	1/1:13,0:12:6.67:31,7,0	1/1:17,0:16:1.03:58,1,0	0/1:30,0:29:36.15:36,0,425	0/0:12,0:12:20.63:0,21,145	0/1:19,0:16:56.89:57,0,117	./.	1/1:12,4:16:2.60:10,3,0	0/1:15,3:18:11.94:44,0,12	1/1:11,1:11:6.84:71,7,0	0/0:12,0:10:2.77:0,3,34	0/0:9,0:9:17.96:0,18,185	0/0:36,0:36:99:0,99,1709	0/0:29,0:29:73.89:0,74,1204	0/1:10,0:5:5:5,0,21	0/1:12,0:10:0:0,0,0	1/1:44,2:44:3.98:68,4,0	0/1:5,1:6:0:0,0,0	0/1:9,1:9:10.83:19,0,11	0/1:12,8:20:0:0,0,0	0/0:11,0:11:11.78:0,12,191	0/1:22,0:22:24.80:98,0,25	0/1:12,0:12:3.82:4,0,22	0/0:4,0:4:5.96:0,6,44
chr10	95391376	.	ATG	A	687.42	PASS	AB=0.848;AC=31;AF=0.574;AN=54;BaseQRankSum=7.003;DP=396;FS=48.970;HRun=0;HaplotypeScore=93.3872;InbreedingCoeff=0.4083;MQ=37.36;MQ0=24;MQRankSum=0.868;QD=3.06;ReadPosRankSum=-2.461;VQSLOD=-0.0691;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:4:0:0,0,0	0/1:0,3:3:0:0,0,0	0/0:25,0:5:12.03:0,12,196	0/0:38,0:2:6.02:0,6,101	1/1:7,3:10:6:69,6,0	1/1:10,0:9:5.29:28,5,0	0/0:11,0:10:0:0,0,0	0/0:25,0:22:62.42:0,62,723	1/1:3,3:7:9.03:123,9,0	0/1:17,0:14:48.15:48,0,145	./.	1/1:8,4:12:2.84:15,3,0	1/1:13,3:16:8.79:85,9,0	1/1:7,2:8:8.84:76,9,0	1/1:4,3:8:3:26,3,0	1/1:3,4:7:8.95:104,9,0	0/0:37,0:37:99:0,99,1875	0/0:24,0:24:40.44:0,40,1096	0/1:9,1:3:12.05:12,0,29	0/1:8,1:7:0:0,0,0	1/1:26,4:29:5.39:24,5,0	0/1:4,1:5:0:0,0,0	0/1:6,2:7:0:0,0,0	0/1:11,8:19:0:0,0,0	1/1:4,5:8:2.22:7,2,0	1/1:18,0:17:16.67:192,17,0	0/1:9,0:9:19.04:27,0,19	0/0:3,0:3:5.91:0,6,39
chr10	95391382	.	A	ACG	584.51	PASS	AB=1.000;AC=8;AF=0.160;AN=50;BaseQRankSum=1.063;DP=368;FS=3.360;HRun=0;HaplotypeScore=78.0426;InbreedingCoeff=0.3803;MQ=35.85;MQ0=31;MQRankSum=-4.684;QD=8.23;ReadPosRankSum=-0.380;VQSLOD=3.2025;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:3,0:3:0:0,0,0	0/0:22,0:3:5.97:0,6,49	0/0:35,0:2:5.97:0,6,45	./.	0/0:7,0:8:2.99:0,3,24	0/1:11,0:9:0.05:0,0,0	1/1:12,11:20:47.66:640,48,0	0/1:6,0:6:11.64:12,0,17	0/0:16,0:13:29.67:0,30,294	./.	0/0:14,0:12:2.99:0,3,25	0/0:11,0:11:1.48:0,1,48	0/1:7,0:5:0.01:0,0,0	0/0:11,0:9:2.98:0,3,22	0/0:6,0:6:5.94:0,6,41	0/0:35,0:35:90.23:0,90,1221	0/0:22,0:22:54.08:0,54,708	0/0:8,0:1:3.01:0,3,43	0/0:8,0:6:0:0,0,0	0/0:26,0:26:5.99:0,6,48	0/0:5,0:5:0:0,0,0	0/0:8,0:7:0:0,0,0	0/1:18,0:17:0.10:0,0,0	0/0:10,0:8:2.99:0,3,24	0/0:16,0:14:32.50:0,33,253	0/0:7,0:8:14.52:0,15,111	1/1:4,1:3:5.89:39,6,0
chr10	95391400	.	ACG	A	39.04	PASS	AB=0.960;AC=14;AF=0.350;AN=40;BaseQRankSum=4.793;DP=300;FS=1.278;HRun=0;HaplotypeScore=71.6230;InbreedingCoeff=0.0733;MQ=32.88;MQ0=37;MQRankSum=-4.098;QD=0.31;ReadPosRankSum=-4.021;VQSLOD=0.7909;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:2:0:0,0,0	./.	./.	0/0:23,0:2:2.92:0,3,17	./.	0/0:6,0:4:0:0,0,0	0/1:13,0:10:0.15:0,0,0	0/1:11,0:8:6.66:61,0,7	0/1:4,1:5:0.01:0,0,0	0/1:10,0:9:4.78:5,0,44	./.	0/1:13,0:10:13.96:14,0,48	0/1:16,0:15:9.69:30,0,10	0/1:5,0:3:0:0,0,0	0/1:7,3:8:0:0,0,0	./.	0/0:32,0:32:89.02:0,89,1521	0/0:23,0:23:60.18:0,60,1067	0/0:10,0:3:3.64:0,4,69	./.	0/0:31,0:26:3.01:0,3,58	./.	0/1:4,0:4:0:0,0,0	1/1:19,0:18:0.37:1,0,0	./.	0/1:13,0:11:16.41:16,0,103	0/0:6,0:6:1.80:0,2,15	1/1:5,0:3:0.89:3,1,0
chr10	95391422	.	A	ACG	554.48	PASS	AB=0.802;AC=18;AF=0.391;AN=46;BaseQRankSum=6.378;DP=281;FS=0.000;HRun=0;HaplotypeScore=99.2185;InbreedingCoeff=0.1731;MQ=34.71;MQ0=32;MQRankSum=-6.031;QD=3.65;ReadPosRankSum=-2.640;VQSLOD=1.8995;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:13:0:0,0,0	./.	0/0:14,0:1:3.01:0,3,45	0/0:19,0:2:3.01:0,3,46	./.	0/0:5,1:4:0.47:0,0,1	0/1:13,3:13:10.56:29,0,11	0/0:3,0:1:2.84:0,3,14	0/0:7,0:7:3.01:0,3,38	1/1:7,2:8:14.87:104,15,0	0/1:3,1:3:0:0,0,0	0/1:5,7:11:30.51:112,0,31	0/1:7,8:14:3.36:181,0,3	1/1:4,5:8:6:82,6,0	0/1:8,0:8:0:0,0,0	0/0:3,0:3:3.01:0,3,44	0/0:35,0:35:99:0,102,1529	0/0:26,0:25:69.16:0,69,984	1/1:5,0:2:2.95:20,3,0	./.	0/1:27,4:26:11.22:12,0,11	./.	0/1:2,2:4:0:0,0,0	0/1:9,3:11:0.02:0,0,0	./.	0/1:6,3:7:29.77:89,0,30	1/1:0,1:1:3.01:46,3,0	0/0:2,0:2:2.96:0,3,19
chr10	95391427	.	CAG	C	494.38	PASS	AB=0.880;AC=23;AF=0.575;AN=40;BaseQRankSum=7.097;DP=286;FS=0.809;HRun=0;HaplotypeScore=110.0194;InbreedingCoeff=0.3432;MQ=35.06;MQ0=23;MQRankSum=-6.707;QD=3.80;ReadPosRankSum=-3.157;VQSLOD=1.9398;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:14:0.06:0,0,0	./.	0/0:18,0:2:6.01:0,6,84	0/0:18,0:3:8.95:0,9,99	./.	1/1:4,2:5:2.94:18,3,0	1/1:11,5:15:11.71:99,12,0	./.	0/1:8,0:8:15.31:21,0,15	1/1:8,3:11:14.35:132,14,0	./.	0/1:13,1:13:20.27:22,0,20	1/1:13,2:14:19.18:143,19,0	1/1:8,3:10:3.90:41,4,0	./.	0/0:3,0:3:2.99:0,3,23	0/0:35,0:35:99:0,102,1783	0/0:26,0:25:75.16:0,75,1236	1/1:3,1:2:5.95:46,6,0	./.	0/0:25,4:26:2.95:0,3,13	./.	0/1:2,2:4:0:0,0,0	1/1:12,0:11:0.37:1,0,0	./.	0/1:6,2:7:19.07:46,0,19	1/1:3,0:3:3.01:40,3,0	1/1:2,0:2:2.96:19,3,0
chr10	95391438	.	GCA	G	237.58	PASS	AB=1.000;AC=16;AF=0.364;AN=44;BaseQRankSum=5.748;DP=351;FS=4.218;HRun=0;HaplotypeScore=128.6505;InbreedingCoeff=0.2508;MQ=35.29;MQ0=21;MQRankSum=-5.138;QD=2.16;ReadPosRankSum=-0.832;VQSLOD=2.4256;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:5.73:0,6,47	0/0:1,0:1:2.80:0,3,13	0/0:20,0:3:9.01:0,9,125	0/0:23,0:6:16.52:0,17,235	./.	1/1:6,0:6:1.25:3,1,0	1/1:21,0:20:3.73:30,4,0	1/1:0,5:5:15.04:170,15,0	0/1:11,0:11:0.43:0,0,35	0/1:10,0:10:14.07:14,0,74	./.	0/1:14,0:13:8.89:9,0,75	1/1:16,0:15:12.09:79,12,0	0/1:15,0:14:5.67:19,0,6	./.	0/0:3,0:3:3.01:0,3,38	0/0:32,0:32:93.32:0,93,1743	0/0:28,0:27:81.25:0,81,1459	0/0:13,0:10:5.91:0,6,83	./.	0/0:35,0:32:2.73:0,3,31	./.	0/1:4,0:4:0:0,0,0	0/0:16,0:15:2.61:0,3,25	./.	0/0:11,0:10:5.01:0,5,137	0/1:6,0:6:20.19:20,0,26	1/1:0,2:2:3:25,3,0
chr10	95391450	.	ACG	A	1261.42	PASS	AB=0.799;AC=26;AF=0.500;AN=52;BaseQRankSum=7.184;DP=429;FS=1.213;HRun=0;HaplotypeScore=142.7570;InbreedingCoeff=0.0026;MQ=40.87;MQ0=19;MQRankSum=-4.500;QD=4.76;ReadPosRankSum=-0.302;VQSLOD=3.0546;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:22:14.90:15,0,42	1/1:1,1:2:3.01:42,3,0	0/0:28,0:9:20.89:0,21,223	0/0:29,0:12:35.99:0,36,414	0/1:7,1:7:8.59:18,0,9	1/1:4,5:9:14.91:114,15,0	1/1:6,17:22:17.83:226,18,0	0/1:13,0:12:35.52:73,0,36	0/0:11,1:12:7.78:0,8,47	0/1:1,9:10:26.47:214,0,26	0/1:1,6:7:0:0,0,0	0/1:13,2:14:28.67:34,0,29	0/1:18,2:19:33.37:44,0,33	0/1:13,1:14:11.30:11,0,40	0/0:9,0:9:0.89:0,1,2	0/0:3,0:3:3.01:0,3,31	0/0:37,0:37:99:0,104,1703	0/0:31,0:30:84.14:0,84,1405	0/1:11,5:13:44.11:119,0,44	1/1:2,3:5:3:25,3,0	0/1:19,30:47:3.45:52,0,3	./.	1/1:4,1:5:2.99:24,3,0	0/1:22,0:21:6.25:128,0,6	./.	1/1:6,7:12:5.61:183,6,0	0/1:1,7:8:13.48:68,0,13	1/1:3,0:3:3:27,3,0
chr10	95391460	.	ACG	A	1838.10	PASS	AB=1.000;AC=28;AF=0.538;AN=52;BaseQRankSum=6.240;DP=462;FS=0.000;HRun=0;HaplotypeScore=151.3191;InbreedingCoeff=0.3480;MQ=55.69;MQ0=10;MQRankSum=-6.219;QD=6.81;ReadPosRankSum=-0.883;VQSLOD=3.2363;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:32.64:0,33,349	1/1:3,0:3:5.99:63,6,0	0/0:22,0:11:23.57:0,24,431	0/0:31,0:18:51.81:0,52,694	0/1:10,0:9:5.60:39,0,6	1/1:11,0:11:17.90:137,18,0	1/1:21,2:22:23.93:267,24,0	0/1:18,0:17:27.79:102,0,28	0/0:13,0:13:7.49:0,7,45	0/1:11,0:11:2.29:235,0,2	0/1:8,0:8:0:0,0,0	0/1:16,0:15:9.58:63,0,10	0/1:20,0:20:50.97:75,0,51	0/1:15,0:15:31.49:34,0,31	0/0:9,0:9:0.89:0,1,2	0/0:4,0:4:3.01:0,3,30	0/0:39,0:39:99:0,108,1771	0/0:30,0:30:87.24:0,87,1568	1/1:16,0:14:2.28:128,2,0	1/1:5,0:5:3:25,3,0	1/1:49,5:53:15.69:132,16,0	./.	0/1:7,0:7:1.01:15,0,1	1/1:26,1:26:8.08:232,8,0	./.	1/1:13,1:14:34.69:309,35,0	1/1:7,1:8:8.06:81,8,0	1/1:4,0:4:8.95:69,9,0
chr10	95391519	.	CCCTGT	C	2214.73	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.571;DP=507;FS=16.351;HRun=0;HaplotypeScore=123.7177;InbreedingCoeff=0.9705;MQ=83.84;MQ0=1;MQRankSum=-6.339;QD=33.56;ReadPosRankSum=1.924;VQSLOD=2.7088;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:87.30:0,87,2593	1/1:1,7:8:18.06:369,18,0	0/0:15,0:15:27.09:0,27,736	0/0:25,0:25:57.15:0,57,1387	1/1:6,9:14:15.52:309,16,0	0/0:15,0:15:42.10:0,42,1202	0/0:24,0:24:60.21:0,60,1769	0/0:20,0:20:51.13:0,51,1439	1/1:2,12:14:24.08:492,24,0	0/0:15,0:15:42.14:0,42,1241	0/0:7,0:7:14.98:0,15,439	0/0:24,0:24:63.22:0,63,1836	0/0:11,0:11:27.09:0,27,796	0/0:18,0:18:48.12:0,48,1366	1/1:1,7:8:15.05:308,15,0	1/1:1,8:9:15.05:308,15,0	0/0:39,0:39:99:0,114,3341	0/0:28,0:28:75.26:0,75,2153	0/0:12,0:12:36.11:0,36,972	0/0:8,0:8:18.06:0,18,508	0/0:44,0:44:81.22:0,81,2414	0/0:10,0:10:27.05:0,27,753	0/0:8,0:8:21.07:0,21,615	0/0:40,0:40:99:0,105,3032	1/1:1,11:12:30.10:614,30,0	0/0:18,0:18:54.19:0,54,1620	0/0:18,0:18:42.06:0,42,1136	0/0:4,0:4:9.03:0,9,257
chr10	95392017	.	C	CCCT	132.11	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=0.233;DP=188;FS=11.035;HRun=0;HaplotypeScore=45.9062;InbreedingCoeff=0.3947;MQ=88.74;MQ0=1;MQRankSum=-0.260;QD=6.29;ReadPosRankSum=-0.880;VQSLOD=0.4611;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:2:1.46:0,1,19	1/1:1,0:1:2.80:13,3,0	0/0:21,0:14:16.10:0,16,144	0/0:15,0:12:6.52:0,7,115	0/0:3,0:3:2.98:0,3,22	0/0:5,0:5:8.74:0,9,55	0/0:17,0:17:23.60:0,24,198	1/1:2,6:8:18.43:183,18,0	1/1:3,0:3:0.89:2,1,0	./.	0/0:5,0:5:5.83:0,6,38	0/0:8,0:8:17.70:0,18,99	0/0:10,0:8:17.47:0,17,138	0/0:8,0:8:12.21:0,12,113	0/0:6,0:6:2.64:0,3,75	0/0:2,0:2:5.65:0,6,31	0/0:9,0:9:20.01:0,20,178	0/0:8,0:8:9.40:0,9,152	0/0:5,0:5:7.55:0,8,57	0/0:3,0:3:3:0,3,26	0/0:13,0:11:8.67:0,9,54	0/0:5,0:5:8.67:0,9,61	0/1:6,0:6:2.52:3,0,11	0/0:4,0:4:1.57:0,2,23	0/0:4,0:4:2.66:0,3,19	0/0:5,0:5:3.88:0,4,26	0/0:6,0:6:13.33:0,13,81	1/1:3,0:3:5.88:48,6,0
chr10	95392020	.	T	TC	701.09	PASS	AB=0.913;AC=40;AF=0.800;AN=50;BaseQRankSum=-0.426;DP=184;FS=0.000;HRun=10;HaplotypeScore=37.4475;InbreedingCoeff=0.0397;MQ=89.86;MQ0=1;MQRankSum=-1.234;QD=4.58;ReadPosRankSum=-0.206;VQSLOD=-0.4169;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:3:0.47:1,0,0	0/0:1,0:1:0:0,0,0	0/0:22,0:15:12.68:0,13,71	0/1:12,0:11:1.24:1,0,37	./.	1/1:5,0:5:3.48:33,3,0	0/1:13,6:19:33.90:80,0,34	1/1:6,0:6:2.68:11,3,0	1/1:3,0:3:0.47:1,0,0	./.	1/1:5,0:5:3.89:34,4,0	1/1:7,1:8:15.03:153,15,0	0/1:7,2:7:15.73:27,0,16	0/1:8,1:9:17.48:28,0,17	1/1:6,0:6:4.90:18,5,0	1/1:3,0:3:3.62:11,4,0	0/1:10,0:10:20.19:108,0,20	0/1:7,0:7:10.70:52,0,11	1/1:4,0:4:2.97:20,3,0	./.	1/1:11,0:9:5.49:34,5,0	1/1:5,0:5:3.01:31,3,0	1/1:5,1:6:2.97:9,3,0	1/1:4,0:4:6:52,6,0	1/1:4,0:4:0.47:1,0,0	1/1:4,0:4:2.99:24,3,0	1/1:5,1:6:8.92:79,9,0	1/1:2,0:2:4.09:17,4,0
chr10	95392030	.	CGA	C	108.36	PASS	AB=0.992;AC=15;AF=0.268;AN=56;BaseQRankSum=0.890;DP=191;FS=58.048;HRun=0;HaplotypeScore=38.2713;InbreedingCoeff=-0.2179;MQ=89.02;MQ0=1;MQRankSum=-2.743;QD=1.09;ReadPosRankSum=-1.116;VQSLOD=-0.7097;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:7:3.64:4,0,171	0/0:2,0:2:6.02:0,6,79	0/1:18,2:13:19.01:19,0,292	0/1:16,0:13:12.47:12,0,98	0/0:2,0:2:3.01:0,3,50	0/0:6,0:6:7.42:0,7,116	0/0:15,0:15:21.95:0,22,277	0/0:6,0:6:14.94:0,15,208	1/1:2,0:2:3.01:37,3,0	0/0:4,0:4:9.03:0,9,158	0/0:5,0:5:11.99:0,12,137	0/1:9,0:9:11.19:11,0,220	0/0:10,0:8:8.37:0,8,176	0/1:7,0:7:24.49:24,0,129	0/0:5,1:6:0.36:0,0,214	0/1:6,0:6:17.29:17,0,149	0/0:12,0:12:4.60:0,5,287	0/1:9,0:9:33.34:33,0,184	0/1:7,0:7:14.69:15,0,180	0/0:2,0:2:3.01:0,3,51	0/0:12,0:10:21.03:0,21,302	0/0:4,0:4:6:0,6,67	0/1:5,0:5:19.59:20,0,86	0/1:4,0:4:35.36:40,0,35	1/1:1,1:2:1.25:3,1,0	0/1:5,0:5:12.20:12,0,139	0/0:4,0:4:0.49:0,0,30	0/0:2,0:2:6.01:0,6,67
chr10	95392169	.	G	GCA	20388.45	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-7.458;DP=539;FS=12.467;HRun=0;HaplotypeScore=63.6249;InbreedingCoeff=0.9977;MQ=87.90;MQ0=0;MQRankSum=-8.091;QD=45.41;ReadPosRankSum=3.200;VQSLOD=5.7855;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:42:99:1998,111,0	1/1:0,7:9:21.07:377,21,0	0/0:27,0:27:72.23:0,72,995	0/0:21,0:21:51.47:0,51,669	1/1:0,12:12:33.11:594,33,0	1/1:2,14:16:36.12:648,36,0	1/1:2,28:30:72.25:1296,72,0	1/1:3,25:29:78.22:1327,78,0	1/1:1,10:12:30.10:540,30,0	1/1:1,15:17:48.14:828,48,0	1/1:1,12:13:33.11:593,33,0	1/1:0,15:15:42.14:756,42,0	1/1:1,16:17:42.14:756,42,0	1/1:0,19:19:51.17:918,51,0	1/1:2,16:18:45.15:810,45,0	1/1:1,12:13:33.11:594,33,0	0/0:25,0:25:72.24:0,72,1008	0/0:17,0:17:48.14:0,48,652	1/1:2,12:14:36.12:648,36,0	1/1:1,13:14:33.11:592,33,0	1/1:3,26:29:78.27:1404,78,0	1/1:1,23:25:60.21:1079,60,0	1/1:1,15:17:42.14:755,42,0	1/1:2,22:25:57.20:1027,57,0	1/1:0,13:13:39.13:701,39,0	1/1:2,17:20:51.17:918,51,0	1/1:0,19:21:45.15:810,45,0	1/1:1,8:9:24.08:419,24,0
chr10	95392347	.	C	CTGGGAGT	2609.71	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.322;DP=653;FS=0.000;HRun=0;HaplotypeScore=148.7539;InbreedingCoeff=0.9870;MQ=76.30;MQ0=0;MQRankSum=-5.603;QD=76.76;ReadPosRankSum=-2.886;VQSLOD=2.9645;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,148,3774	0/0:6,0:6:15.05:0,15,349	0/0:17,0:17:33.11:0,33,742	0/0:14,0:14:32.25:0,32,470	0/0:11,0:11:33.11:0,33,866	0/0:29,0:29:81.25:0,81,2027	0/0:37,0:37:99:0,102,2594	1/1:8,10:21:60.19:2004,60,0	0/0:10,0:10:30.09:0,30,691	0/0:33,0:33:93.30:0,93,2326	0/0:16,0:16:45.15:0,45,1135	0/0:26,0:26:69.24:0,69,1712	0/0:24,0:24:69.24:0,69,1772	0/0:31,0:31:87.26:0,87,2225	0/0:29,0:29:78.27:0,78,2039	0/0:20,0:20:60.21:0,60,1561	0/0:40,0:40:99:0,120,2996	0/0:15,0:15:45.15:0,45,1167	0/0:23,0:23:63.22:0,63,1589	0/0:18,0:18:54.19:0,54,1369	0/0:37,0:37:99:0,111,2884	0/0:17,0:17:51.18:0,51,1292	0/0:17,0:17:51.17:0,51,1194	0/0:38,0:38:99:0,111,2855	0/0:16,0:16:48.15:0,48,1206	0/0:21,0:21:60.21:0,60,1484	0/0:24,0:24:66.23:0,66,1581	1/1:3,7:13:18.06:725,18,0
chr10	95392489	.	G	GTTTTTTT	23585.44	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=8.884;DP=794;FS=2.325;HRun=8;HaplotypeScore=205.6477;InbreedingCoeff=0.8046;MQ=63.38;MQ0=3;MQRankSum=-12.309;QD=34.08;ReadPosRankSum=6.048;VQSLOD=0.5978;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,33:56:51.18:1698,51,0	1/1:3,10:14:12.04:417,12,0	0/0:26,0:24:41.33:0,41,836	0/0:22,0:19:36.96:0,37,595	1/1:7,18:28:44.94:941,45,0	1/1:22,0:22:21.07:489,21,0	1/1:28,0:28:48.16:1122,48,0	0/1:40,0:40:99:831,0,337	1/1:11,13:26:12.04:426,12,0	1/1:34,0:34:52.58:1618,53,0	1/1:29,0:29:25.93:667,26,0	1/1:26,0:26:42.24:1044,42,0	1/1:38,0:38:66.23:1565,66,0	1/1:50,0:50:84.28:1973,84,0	1/1:11,19:30:39.13:1313,39,0	1/1:12,9:27:32.60:851,33,0	0/0:33,0:33:44.43:0,44,1705	0/0:21,0:21:63.22:0,63,1304	1/1:22,0:22:21.43:652,21,0	1/1:33,0:32:62.37:1473,62,0	1/1:8,0:8:9.03:199,9,0	1/1:23,0:22:43.19:1007,43,0	1/1:27,0:27:48.64:1145,49,0	1/1:24,0:25:21.07:457,21,0	1/1:7,15:25:30.10:1016,30,0	1/1:33,0:32:53.30:1299,53,0	1/1:36,0:36:54.19:1247,54,0	1/1:9,0:10:3.86:137,4,0
chr10	95392491	.	T	TTGTTTGTTTC	42363.49	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=-6.105;DP=845;FS=11.515;HRun=0;HaplotypeScore=201.8228;InbreedingCoeff=0.4033;MQ=63.33;MQ0=3;MQRankSum=-12.807;QD=57.02;ReadPosRankSum=5.013;VQSLOD=3.6071;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:55,0:55:66.28:460,0,66	1/1:13,0:13:17.68:180,18,0	0/0:25,0:23:26.33:0,26,1176	0/0:23,0:20:45.37:0,45,935	0/1:28,0:28:63.59:314,0,64	1/1:1,13:25:24.08:1138,24,0	1/1:0,20:26:48.16:2514,48,0	0/1:41,0:41:99:1544,0,106	1/1:28,0:27:15.68:450,16,0	1/1:3,26:39:99:4146,99,0	1/1:2,20:30:42.13:1669,42,0	1/1:1,18:31:45.02:2352,45,0	1/1:1,28:42:69.18:3473,69,0	1/1:2,40:55:84.22:4360,84,0	0/1:32,0:31:47.40:370,0,47	0/1:29,0:29:99:327,0,152	0/0:33,0:33:13.09:0,13,2700	0/0:21,0:21:63.22:0,63,2079	1/1:2,12:27:72.01:2154,72,0	1/1:0,28:32:69.17:3369,69,0	1/1:1,5:11:12.04:595,12,0	1/1:0,18:25:48.16:2282,48,0	1/1:2,20:31:48.63:2512,49,0	1/1:6,13:34:33.11:1422,33,0	0/1:25,0:25:16.76:298,0,17	1/1:3,20:34:84.24:3381,84,0	1/1:1,28:37:54.18:2830,54,0	1/1:10,0:10:6.02:226,6,0
chr10	95392492	.	T	TG	3887.33	PASS	AB=0.990;AC=31;AF=0.554;AN=56;BaseQRankSum=12.222;DP=754;FS=3.172;HRun=0;HaplotypeScore=212.8670;InbreedingCoeff=0.7105;MQ=64.52;MQ0=3;MQRankSum=-8.951;QD=8.76;ReadPosRankSum=6.620;VQSLOD=3.3940;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:75.51:0,76,435	0/0:12,0:12:4.86:0,5,63	0/0:24,0:23:53.96:0,54,743	0/0:23,0:20:43.02:0,43,595	0/0:27,0:27:48.30:0,48,285	1/1:17,0:17:8.45:73,8,0	1/1:20,0:20:43.91:198,44,0	1/1:3,41:44:99:1267,120,0	0/0:29,0:28:43.09:0,43,268	0/1:31,1:32:45.59:191,0,46	1/1:23,0:23:0.15:88,0,0	1/1:23,0:23:15.32:147,15,0	1/1:35,0:35:44.43:253,44,0	1/1:48,0:48:75.93:357,76,0	0/0:31,0:30:43.81:0,44,285	0/0:29,0:29:59.29:0,59,395	0/0:33,0:33:82.33:0,82,1306	0/0:21,0:21:63.21:0,63,879	0/1:16,0:16:14.59:15,0,63	1/1:29,0:28:56.04:257,56,0	1/1:11,0:11:11.24:68,11,0	1/1:22,0:21:32.09:172,32,0	1/1:25,0:26:42.25:184,42,0	1/1:25,0:25:4.60:146,5,0	0/0:24,0:24:40.78:0,41,205	0/1:25,0:24:4.22:175,0,4	1/1:29,0:29:49.40:224,49,0	1/1:3,0:19:8.97:74,9,0
chr10	95393157	.	T	TTA	6274.39	PASS	AB=0.820;AC=31;AF=0.554;AN=56;BaseQRankSum=0.229;DP=542;FS=2.249;HRun=0;HaplotypeScore=160.8238;InbreedingCoeff=0.2163;MQ=53.40;MQ0=9;MQRankSum=-1.542;QD=15.45;ReadPosRankSum=0.619;VQSLOD=4.5018;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:57.09:0,57,630	0/1:9,0:9:0:0,0,0	0/1:7,0:7:0:0,0,0	0/1:11,0:6:0.80:1,0,31	0/0:12,0:12:2.83:0,3,23	1/1:13,12:25:3.13:443,3,0	0/1:9,4:13:40.67:174,0,41	1/1:33,4:37:45.09:610,45,0	0/1:16,0:17:15.29:15,0,20	0/1:18,13:27:47.04:696,0,47	1/1:13,10:23:8.19:345,8,0	1/1:18,14:29:13.80:567,14,0	0/1:16,13:25:24.73:372,0,25	0/1:9,6:14:27.79:356,0,28	0/0:17,0:20:8.83:0,9,61	0/0:16,0:19:5.47:0,5,18	0/0:26,0:26:72.18:0,72,851	0/0:21,0:21:60.07:0,60,657	1/1:4,9:12:24.06:367,24,0	1/1:13,8:20:24.06:356,24,0	0/1:8,1:9:19.04:171,0,19	0/1:6,11:17:22.17:152,0,22	0/1:10,12:21:12.94:248,0,13	1/1:10,8:18:12.03:170,12,0	0/0:8,0:10:0.89:0,1,2	1/1:14,7:20:42.05:602,42,0	1/1:18,10:27:38.55:480,39,0	1/1:4,2:6:9.03:147,9,0
chr10	95393166	.	T	TACACAC	440.82	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-1.061;DP=535;FS=6.038;HRun=0;HaplotypeScore=209.6858;InbreedingCoeff=0.8118;MQ=46.89;MQ0=17;MQRankSum=1.207;QD=5.19;ReadPosRankSum=-3.276;VQSLOD=1.7757;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.04:0,63,1464	1/1:3,3:7:2.86:22,3,0	0/0:6,0:4:9:0,9,81	0/0:15,0:4:10.30:0,10,76	1/1:6,6:13:2.89:48,3,0	0/0:24,0:24:51.14:0,51,802	0/0:12,0:12:27.08:0,27,464	0/0:32,0:32:63.17:0,63,884	1/1:4,8:15:5.99:119,6,0	0/0:29,0:25:68.86:0,69,916	0/0:22,0:21:29.75:0,30,414	0/0:30,0:27:57.18:0,57,855	0/0:29,0:23:44.81:0,45,645	0/0:17,0:15:36.11:0,36,539	1/1:7,12:20:9.03:143,9,0	1/1:10,8:20:11.97:214,12,0	0/0:28,0:28:81.26:0,81,1922	0/0:23,0:23:66.23:0,66,1534	0/0:13,0:11:30.08:0,30,361	0/0:21,0:20:24.07:0,24,287	0/0:11,0:11:21.05:0,21,308	0/0:16,0:16:17.67:0,18,219	0/0:21,0:19:23.73:0,24,361	0/0:19,0:19:18.51:0,19,228	1/1:5,3:10:3:48,3,0	0/0:24,0:21:54.05:0,54,670	0/0:28,0:27:47.78:0,48,724	0/0:6,0:6:17.98:0,18,155
chr10	95393168	.	T	TAC	2307.20	PASS	AB=0.962;AC=25;AF=0.446;AN=56;BaseQRankSum=6.651;DP=535;FS=2.127;HRun=0;HaplotypeScore=175.4518;InbreedingCoeff=-0.4102;MQ=46.28;MQ0=17;MQRankSum=-1.744;QD=5.49;ReadPosRankSum=5.310;VQSLOD=2.6946;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.19:0,60,882	0/1:3,3:6:0:0,0,0	0/0:6,0:3:5.22:0,5,32	0/1:17,0:4:3.92:4,0,34	0/0:7,6:13:0.47:0,0,1	0/1:24,0:24:99:156,0,102	0/1:12,0:12:56.50:57,0,119	0/1:31,0:30:63.90:192,0,64	0/1:7,8:15:12.54:33,0,13	0/1:29,0:26:99:304,0,155	0/1:23,0:22:20.31:122,0,20	0/1:30,0:27:75.75:190,0,76	0/1:28,0:22:99:159,0,104	0/1:17,0:15:83.99:136,0,84	0/0:9,12:21:2.18:0,2,5	1/1:11,8:19:2.48:22,2,0	0/0:28,0:28:81.22:0,81,1164	0/0:24,0:24:69.16:0,69,965	0/1:12,0:10:14.81:148,0,15	0/1:19,0:18:22.50:130,0,23	0/1:13,0:13:70.39:81,0,70	0/1:16,0:16:32.26:71,0,32	0/1:21,0:19:31.95:82,0,32	0/1:19,0:19:31.20:57,0,31	1/1:8,3:11:2.99:23,3,0	0/1:24,0:21:54.02:249,0,54	0/1:27,0:26:49.32:155,0,49	1/1:6,0:6:9.01:85,9,0
chr10	95393186	.	T	TAC	8746.18	PASS	AB=0.619;AC=41;AF=0.732;AN=56;BaseQRankSum=-2.552;DP=594;FS=23.792;HRun=0;HaplotypeScore=170.2771;InbreedingCoeff=0.5517;MQ=47.28;MQ0=19;MQRankSum=-0.116;QD=18.15;ReadPosRankSum=-6.015;VQSLOD=2.2167;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:54.18:0,54,702	1/1:3,6:9:0.39:1,0,0	0/0:14,0:2:5.99:0,6,60	0/0:23,0:3:2.74:0,3,12	1/1:9,4:13:2.86:51,3,0	1/1:6,19:26:27.05:402,27,0	0/1:5,7:12:26.96:139,0,27	1/1:12,39:52:99:1543,105,0	1/1:8,6:14:3.01:51,3,0	1/1:11,25:32:84.25:1313,84,0	1/1:5,16:20:6.02:102,6,0	1/1:13,17:28:29.97:480,30,0	1/1:16,11:21:39.10:594,39,0	1/1:6,15:18:27.09:452,27,0	0/1:7,12:19:0:0,0,0	0/1:13,8:21:0:0,0,0	0/0:28,0:28:81.24:0,81,1029	0/0:20,0:20:57.17:0,57,724	1/1:6,5:10:24.08:395,24,0	1/1:5,17:21:27.09:453,27,0	1/1:6,12:17:36.11:585,36,0	1/1:6,8:14:6:75,6,0	1/1:11,9:18:21.06:324,21,0	1/1:14,7:21:20.85:329,21,0	0/1:4,8:12:0.10:0,0,0	1/1:6,22:26:63.17:1026,63,0	0/1:3,25:28:11.80:381,0,12	1/1:2,2:4:3.01:50,3,0
chr10	95393210	.	TAC	T	372.63	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=3.398;DP=609;FS=3.127;HRun=0;HaplotypeScore=177.5805;InbreedingCoeff=0.6370;MQ=50.25;MQ0=14;MQRankSum=-0.502;QD=12.85;ReadPosRankSum=-0.091;VQSLOD=3.6837;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:22,6:29:52.35:466,52,0	0/0:9,0:9:4.90:0,5,39	./.	./.	0/0:17,0:17:20.52:0,21,213	0/0:32,0:32:35.42:0,35,472	0/0:15,0:15:30.03:0,30,384	0/0:53,0:51:99:0,135,1745	0/0:13,0:13:9.03:0,9,104	0/0:35,0:35:93.21:0,93,1469	0/0:18,0:17:21.07:0,21,365	0/0:27,0:27:36.07:0,36,546	0/0:22,0:21:39.12:0,39,627	0/0:20,0:18:27.08:0,27,442	0/0:16,0:16:8.96:0,9,98	0/0:22,0:22:10.76:0,11,108	0/0:26,0:26:66.13:0,66,1021	0/0:22,0:22:48.04:0,48,705	0/0:13,0:10:26.87:0,27,272	0/0:23,0:23:44.95:0,45,669	0/0:25,0:24:60.17:0,60,976	0/0:16,0:16:8.93:0,9,213	0/0:23,0:22:42.06:0,42,591	0/0:19,0:19:24.01:0,24,396	0/0:11,0:11:2.88:0,3,25	0/0:32,0:31:70.87:0,71,1214	0/0:35,0:34:47.88:0,48,776	0/0:8,0:8:17.95:0,18,168
chr10	95393216	.	C	CAT	663.37	PASS	AB=0.731;AC=11;AF=0.204;AN=54;BaseQRankSum=3.450;DP=624;FS=21.174;HRun=0;HaplotypeScore=176.6013;InbreedingCoeff=0.7771;MQ=49.74;MQ0=13;MQRankSum=-0.435;QD=6.98;ReadPosRankSum=-2.089;VQSLOD=1.7059;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:55.07:0,55,305	1/1:2,7:9:3.31:51,3,0	./.	0/0:14,0:3:5.99:0,6,52	0/1:12,7:19:14.73:219,0,15	0/0:33,0:33:36.10:0,36,443	0/0:15,0:15:27.06:0,27,315	0/0:56,0:55:85.14:0,85,1041	1/1:9,4:13:8.94:117,9,0	0/0:36,0:36:99:0,102,1151	0/0:17,0:16:20.63:0,21,266	0/0:26,0:27:36.08:0,36,428	0/0:22,0:21:25.99:0,26,417	0/0:23,0:21:33.08:0,33,392	1/1:12,6:18:15.01:188,15,0	1/1:15,9:24:9.02:149,9,0	0/0:25,0:25:57.05:0,57,683	0/0:18,0:18:44.97:0,45,502	0/0:12,0:9:23.96:0,24,243	0/0:23,0:23:48.01:0,48,579	0/0:25,0:24:60.19:0,60,762	0/0:16,0:17:26.74:0,27,300	0/0:25,0:24:48.09:0,48,579	0/0:19,0:19:23.99:0,24,305	1/1:7,5:12:8.86:97,9,0	0/0:34,0:34:89.13:0,89,1017	0/0:35,0:34:48.08:0,48,603	0/0:9,0:9:18.06:0,18,226
chr10	95393217	.	A	ATG	179.75	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=4.668;DP=622;FS=15.125;HRun=0;HaplotypeScore=178.4759;InbreedingCoeff=0.7128;MQ=49.95;MQ0=13;MQRankSum=0.667;QD=1.87;ReadPosRankSum=0.279;VQSLOD=1.8597;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:57.13:0,57,645	1/1:9,0:9:3.27:26,3,0	./.	0/0:14,0:3:6.02:0,6,88	0/1:19,0:19:78.64:94,0,79	0/0:32,0:32:39.12:0,39,573	0/0:16,0:16:30.09:0,30,435	0/0:55,0:54:99:0,144,1884	1/1:9,4:13:5.87:49,6,0	0/0:37,0:37:99:0,102,1513	0/0:19,0:18:20.63:0,21,321	0/0:27,0:27:36.12:0,36,547	0/0:22,0:21:38.69:0,39,546	0/0:23,0:21:33.11:0,33,502	1/1:15,4:19:8.76:63,9,0	1/1:15,9:24:8.87:74,9,0	0/0:24,0:24:69.15:0,69,943	0/0:19,0:19:45.15:0,45,670	0/0:12,0:9:24.97:0,25,352	0/0:23,0:23:48.05:0,48,731	0/0:25,0:24:60.20:0,60,918	0/0:16,0:16:26.87:0,27,384	0/0:25,0:24:48.14:0,48,730	0/0:18,1:19:23.99:0,24,367	1/1:12,0:12:2.27:21,2,0	0/0:35,0:34:99:0,99,1384	0/0:34,0:33:48.09:0,48,731	0/0:9,0:9:21.04:0,21,296
chr10	95393223	.	A	ATG	172.35	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=5.161;DP=634;FS=8.806;HRun=0;HaplotypeScore=163.7154;InbreedingCoeff=0.5964;MQ=50.78;MQ0=12;MQRankSum=-0.856;QD=1.76;ReadPosRankSum=1.299;VQSLOD=2.1657;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:63.16:0,63,778	0/1:10,0:10:18.66:20,0,19	0/0:10,0:3:6.01:0,6,57	0/0:14,0:4:6.02:0,6,90	0/1:20,0:20:90.96:91,0,98	0/0:31,0:31:42.11:0,42,598	0/0:17,0:17:27.09:0,27,410	0/0:54,0:52:99:0,126,1750	1/1:14,0:14:5.87:49,6,0	0/0:38,0:38:99:0,108,1566	0/0:21,0:20:20.65:0,21,384	0/0:26,0:26:36.12:0,36,545	0/0:25,0:24:47.68:0,48,622	0/0:23,0:21:39.11:0,39,552	1/1:20,0:20:8.76:63,9,0	1/1:18,5:23:8.87:74,9,0	0/0:23,0:23:63.17:0,63,895	0/0:19,0:19:38.22:0,38,743	0/0:11,0:8:24.08:0,24,351	0/0:26,0:26:60.03:0,60,829	0/0:26,0:26:63.18:0,63,941	0/0:14,0:14:26.86:0,27,382	0/0:26,0:25:51.13:0,51,754	0/0:23,0:23:23.93:0,24,366	1/1:10,1:11:2.27:21,2,0	0/0:37,0:36:99:0,99,1398	0/0:31,0:31:48.09:0,48,731	0/0:8,0:8:21.05:0,21,298
chr10	95393306	.	TAC	T	1242.19	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.952;DP=746;FS=39.498;HRun=0;HaplotypeScore=135.0009;InbreedingCoeff=0.8483;MQ=51.73;MQ0=2;MQRankSum=0.469;QD=9.48;ReadPosRankSum=3.214;VQSLOD=1.7550;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,17:30:26.41:349,26,0	1/1:2,8:10:13.72:192,14,0	0/0:18,0:5:3.46:0,3,25	0/0:23,0:4:5.99:0,6,63	1/1:18,28:46:51.14:633,51,0	0/0:35,0:35:60.17:0,60,960	0/0:19,0:19:33.08:0,33,496	0/0:49,0:47:99:0,108,1717	0/0:6,5:11:0:0,0,0	0/0:43,0:43:99:0,111,1805	0/0:20,0:20:57.19:0,57,946	0/0:26,0:26:33.08:0,33,488	0/0:33,0:33:51.14:0,51,853	0/0:38,0:38:66.19:0,66,1051	0/0:6,7:13:0:0,0,0	1/1:6,17:23:8.98:113,9,0	0/0:28,0:28:78.27:0,78,1303	0/0:21,0:21:51.17:0,51,848	0/0:11,0:11:27.09:0,27,444	0/0:30,0:30:76.43:0,76,1195	0/0:23,0:23:51.16:0,51,824	0/0:24,0:24:66.17:0,66,1028	0/0:33,0:33:81.26:0,81,1325	0/0:27,0:27:55.74:0,56,908	1/1:9,13:22:9.01:117,9,0	0/0:36,0:36:87.29:0,87,1423	0/0:34,0:34:78.22:0,78,1229	0/0:20,0:20:57.03:0,57,819
chr10	95393332	.	TAC	T	1282.72	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=6.699;DP=774;FS=0.000;HRun=0;HaplotypeScore=124.5394;InbreedingCoeff=0.7545;MQ=50.35;MQ0=2;MQRankSum=-0.324;QD=13.36;ReadPosRankSum=-1.774;VQSLOD=2.7406;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:8.53:0,9,127	0/0:16,0:16:24.66:0,25,384	1/1:13,0:1:2.88:15,3,0	0/0:12,0:2:2.04:0,2,6	0/0:58,0:58:51.10:0,51,728	0/0:36,0:36:66.14:0,66,1021	0/0:23,0:23:36.10:0,36,623	1/1:5,25:30:72.16:868,72,0	0/1:13,0:13:0.09:0,0,0	0/0:58,0:58:99:0,159,2597	0/0:23,0:23:63.18:0,63,1032	0/0:37,0:36:57.20:0,57,982	0/0:27,0:27:45.11:0,45,692	0/0:33,0:33:63.17:0,63,1006	0/1:23,0:23:0.01:0,0,0	0/0:29,0:29:3.01:0,3,52	0/0:23,0:23:54.17:0,54,906	0/0:15,0:15:39.10:0,39,644	0/0:10,0:10:26.96:0,27,397	0/0:28,0:28:78.06:0,78,1210	0/0:20,0:20:36.03:0,36,508	0/0:22,0:22:63.17:0,63,1007	0/0:34,0:34:78.15:0,78,1169	0/0:30,0:30:54.14:0,54,891	0/0:31,0:31:24.08:0,24,415	0/0:38,0:38:99:0,99,1593	0/0:38,0:38:93.24:0,93,1521	1/1:9,8:17:45.05:528,45,0
chr10	95393340	.	CAT	C	282.58	PASS	AB=0.945;AC=6;AF=0.111;AN=54;BaseQRankSum=7.889;DP=758;FS=0.692;HRun=0;HaplotypeScore=122.8449;InbreedingCoeff=0.4171;MQ=50.47;MQ0=3;MQRankSum=0.108;QD=2.26;ReadPosRankSum=-1.140;VQSLOD=2.4366;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,3:35:57.60:58,0,90	0/0:16,1:17:21.67:0,22,364	./.	0/0:8,1:2:2.68:0,3,11	0/0:46,9:55:42.10:0,42,639	0/0:34,0:34:63.19:0,63,1054	0/0:20,0:20:42.09:0,42,671	0/1:34,0:34:99:183,0,168	0/1:14,1:15:0.09:0,0,0	0/0:59,0:59:99:0,172,2808	0/0:23,0:23:60.21:0,60,1036	0/0:30,0:29:60.19:0,60,1022	0/0:25,0:25:45.12:0,45,721	0/0:35,0:35:60.17:0,60,992	0/1:22,2:24:0.01:0,0,0	0/0:25,1:26:3.01:0,3,53	0/0:19,0:19:51.17:0,51,886	0/0:14,0:14:41.17:0,41,680	0/0:11,0:11:32.29:0,32,470	0/0:28,0:28:72.23:0,72,1205	0/0:17,0:17:24.08:0,24,420	0/0:22,0:22:63.19:0,63,1042	0/0:32,0:32:78.20:0,78,1210	0/0:31,0:31:54.13:0,54,857	0/0:28,3:31:24.08:0,24,415	0/0:40,0:40:99:0,111,1694	0/0:42,0:42:99:0,102,1637	1/1:17,0:17:12.27:150,12,0
chr10	95393428	.	C	CATGTATAT	37.14	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=9.806;DP=749;FS=3.312;HRun=0;HaplotypeScore=306.7963;InbreedingCoeff=0.0721;MQ=38.39;MQ0=18;MQRankSum=-9.130;QD=0.32;ReadPosRankSum=3.999;VQSLOD=2.2525;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:11.85:0,12,53	0/0:10,0:10:0.94:0,1,2	0/0:40,0:6:15.41:0,15,216	0/0:33,0:6:14.32:0,14,308	0/0:35,0:35:23.59:0,24,604	0/0:22,0:22:3.79:0,4,381	0/1:28,0:28:47.86:48,0,531	0/0:29,0:28:19.27:0,19,1531	0/0:25,0:25:1.67:0,2,86	0/0:41,0:39:25.68:0,26,1559	0/0:17,0:16:18.01:0,18,470	0/0:29,0:27:9.01:0,9,745	0/1:28,0:27:48.91:49,0,374	0/0:37,0:37:3.39:0,3,339	1/1:21,0:21:2.66:12,3,0	0/0:28,0:28:1.68:0,2,87	0/0:25,0:25:69.20:0,69,1925	0/0:21,0:21:2.12:0,2,1219	0/0:15,0:14:9.81:0,10,534	0/0:32,0:31:17.81:0,18,486	0/0:21,1:17:2.52:0,3,87	0/0:18,0:18:15.86:0,16,427	0/0:24,0:24:30.06:0,30,743	0/0:21,3:22:6.37:0,6,176	0/0:25,0:24:8.58:0,9,263	0/1:39,0:39:34.04:34,0,1352	0/0:36,0:33:28.66:0,29,1359	0/0:10,0:9:12.24:0,12,462
chr10	95393434	.	CACACACACAG	C	13488.08	PASS	AB=0.554;AC=47;AF=0.839;AN=56;BaseQRankSum=3.761;DP=751;FS=2.487;HRun=0;HaplotypeScore=284.8684;InbreedingCoeff=0.7379;MQ=38.23;MQ0=18;MQRankSum=-3.332;QD=21.93;ReadPosRankSum=1.043;VQSLOD=3.9134;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:25:6.81:30,7,0	1/1:8,0:8:2.03:5,2,0	0/0:51,0:13:33.08:0,33,645	0/0:34,0:9:21.03:0,21,554	1/1:30,0:30:15.53:281,16,0	1/1:12,12:25:27.07:603,27,0	1/1:19,14:33:44.82:981,45,0	1/1:22,4:25:33.46:976,33,0	1/1:19,0:19:3.14:71,3,0	1/1:18,18:34:84.24:2114,84,0	1/1:10,7:16:15.05:290,15,0	1/1:16,15:29:44.93:915,45,0	1/1:16,15:30:41.77:1027,42,0	1/1:6,32:38:17.73:235,18,0	1/1:22,0:22:8.28:50,8,0	1/1:18,0:18:19.06:153,19,0	0/0:29,0:29:82.16:0,82,3367	0/0:21,0:21:46.32:0,46,2057	1/1:9,5:12:26.25:753,26,0	0/1:6,25:30:0.04:1,0,0	1/1:29,0:24:8.66:136,9,0	1/1:14,9:23:9.03:175,9,0	1/1:12,10:22:9.14:215,9,0	1/1:16,11:25:2.12:40,2,0	1/1:23,0:22:6.68:123,7,0	1/1:15,22:37:79.89:2706,80,0	1/1:21,17:36:34.72:1355,35,0	1/1:6,3:9:12.04:255,12,0
chr10	95393440	.	C	CACG	2347.95	PASS	AB=0.987;AC=25;AF=0.446;AN=56;BaseQRankSum=-4.157;DP=739;FS=2.953;HRun=0;HaplotypeScore=284.8534;InbreedingCoeff=-0.2289;MQ=39.62;MQ0=17;MQRankSum=4.825;QD=4.59;ReadPosRankSum=-2.971;VQSLOD=1.3835;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:25:2.13:0,2,19	0/1:8,0:8:0:0,0,0	0/0:55,0:17:39.06:0,39,562	0/0:38,0:13:26.42:0,26,391	1/1:28,0:28:14.49:184,14,0	0/1:25,0:25:99:105,0,137	0/1:33,1:34:99:277,0,269	0/1:25,0:24:99:254,0,287	0/1:18,0:18:9.78:14,0,10	0/1:34,0:32:99:177,0,297	0/1:16,1:16:9.62:131,0,10	0/1:29,1:29:99:232,0,128	0/1:29,0:28:59.04:59,0,269	0/1:35,0:36:16.16:16,0,127	0/0:21,0:21:2.81:0,3,22	0/1:18,0:18:3.49:117,0,3	0/0:30,0:30:84.76:0,85,1406	0/0:24,0:24:56.98:0,57,867	0/1:15,1:14:99:150,0,103	0/0:31,0:30:0.22:0,0,1	0/1:30,0:25:5.92:6,0,69	0/1:19,1:21:50.35:50,0,68	1/1:17,1:18:8.60:124,9,0	1/1:27,0:25:3.08:43,3,0	1/1:23,0:22:8.67:77,9,0	0/1:35,0:35:99:216,0,420	0/1:33,0:30:99:203,0,261	0/1:6,0:6:10.09:71,0,10
chr10	95393444	.	G	GAC	3799.13	PASS	AB=0.925;AC=36;AF=0.643;AN=56;BaseQRankSum=-1.994;DP=754;FS=12.776;HRun=0;HaplotypeScore=295.8576;InbreedingCoeff=0.2531;MQ=41.32;MQ0=18;MQRankSum=1.420;QD=6.63;ReadPosRankSum=-8.842;VQSLOD=0.0873;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:24:2.16:0,2,7	0/1:4,3:7:0:0,0,0	0/0:58,0:19:27.57:0,28,390	0/0:41,0:16:30.90:0,31,303	1/1:19,11:30:5.71:47,6,0	1/1:19,5:25:10.16:246,10,0	1/1:27,3:31:20.01:446,20,0	1/1:25,1:25:46.45:707,46,0	1/1:9,9:18:3.36:32,3,0	0/1:33,0:31:75.07:415,0,75	1/1:15,2:16:5.46:66,5,0	0/1:28,1:27:8.09:162,0,8	0/1:29,4:32:30.73:197,0,31	1/1:37,0:37:4.01:99,4,0	1/1:12,14:26:5.67:67,6,0	1/1:10,9:19:11.90:177,12,0	0/0:31,0:31:82.15:0,82,1058	0/0:24,0:24:38.60:0,39,659	0/1:15,0:14:15.37:220,0,15	0/1:29,0:28:0.27:0,0,1	1/1:24,5:24:8.92:119,9,0	1/1:20,1:21:8.26:107,8,0	1/1:18,1:20:8.66:66,9,0	1/1:20,6:24:0.96:4,1,0	0/1:18,6:23:0.23:0,0,0	0/1:34,2:36:99:279,0,125	0/1:36,0:33:25.14:294,0,25	0/1:5,0:5:0.39:49,0,0
chr10	95393446	.	CACACACG	C	3094.97	PASS	AB=0.995;AC=31;AF=0.554;AN=56;BaseQRankSum=10.908;DP=760;FS=7.181;HRun=0;HaplotypeScore=324.7552;InbreedingCoeff=-0.2196;MQ=41.54;MQ0=18;MQRankSum=-6.167;QD=5.17;ReadPosRankSum=4.613;VQSLOD=1.1206;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:23:29.42:214,29,0	1/1:7,0:7:2.03:5,2,0	0/0:59,0:21:50.39:0,50,1373	0/0:43,0:18:42.50:0,43,1017	1/1:29,1:30:7.33:72,7,0	0/1:25,0:25:37.25:77,0,37	0/1:31,0:31:99:164,0,164	0/1:29,0:28:99:192,0,419	1/1:16,1:17:3.26:49,3,0	0/1:34,0:32:99:470,0,201	0/1:18,0:17:21.65:22,0,74	0/1:30,0:28:99:147,0,160	0/1:32,0:31:99:201,0,301	0/1:37,0:37:14.66:15,0,139	1/1:23,3:26:10.46:64,10,0	1/1:18,1:19:16.37:143,16,0	0/0:30,0:30:81.28:0,81,2878	0/1:23,0:24:40.21:40,0,1890	0/1:16,0:14:85.81:214,0,86	1/1:29,0:28:0.07:1,0,0	0/0:29,0:24:9.28:0,9,85	0/1:22,0:22:32.24:32,0,42	0/1:20,0:20:33.19:63,0,33	0/1:25,0:23:0.10:1,0,0	0/1:22,2:23:0.68:1,0,2	0/1:36,0:36:99:702,0,172	0/1:37,0:34:99:311,0,289	0/1:5,0:5:20.59:57,0,21
chr10	95393453	.	G	GAC	511.72	PASS	AB=0.809;AC=12;AF=0.214;AN=56;BaseQRankSum=5.610;DP=767;FS=0.764;HRun=0;HaplotypeScore=323.7337;InbreedingCoeff=0.7392;MQ=43.42;MQ0=9;MQRankSum=-6.304;QD=2.94;ReadPosRankSum=-2.976;VQSLOD=1.5741;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:26:22.60:197,23,0	0/1:6,2:8:0:0,0,0	0/0:63,0:28:50.66:0,51,575	0/0:53,0:27:60.14:0,60,672	0/1:13,12:25:0.14:0,0,0	0/0:27,0:27:20.47:0,20,136	0/0:31,0:31:42.14:0,42,308	0/0:28,0:28:62.30:0,62,566	1/1:9,10:19:8.91:131,9,0	0/0:32,0:31:65.35:0,65,712	0/0:13,0:13:6.32:0,6,53	0/0:27,0:26:29.10:0,29,255	0/0:33,0:32:52.26:0,52,527	0/0:38,0:38:17.20:0,17,129	1/1:11,18:29:5.67:96,6,0	1/1:9,10:19:15.01:228,15,0	0/0:32,0:32:81.20:0,81,1007	0/0:24,0:24:36.57:0,37,678	0/0:13,0:13:33.03:0,33,336	0/1:28,0:27:0.27:0,0,1	0/0:22,0:21:11.94:0,12,106	0/0:23,0:23:9.28:0,9,84	0/0:21,0:21:8.94:0,9,112	0/0:27,0:26:10.84:0,11,134	0/1:13,6:19:0.23:0,0,0	0/0:41,0:41:96.81:0,97,1020	0/0:36,0:34:51.84:0,52,549	0/0:7,0:7:6.32:0,6,48
chr10	95393455	.	C	CAG	178.93	PASS	AB=0.881;AC=10;AF=0.179;AN=56;BaseQRankSum=6.409;DP=781;FS=7.563;HRun=0;HaplotypeScore=335.1725;InbreedingCoeff=0.6256;MQ=43.44;MQ0=9;MQRankSum=-3.967;QD=1.22;ReadPosRankSum=-1.982;VQSLOD=0.5296;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:25:28.08:29,0,28	0/1:6,2:8:0.04:0,0,0	0/0:62,0:30:61.78:0,62,847	0/0:54,0:29:65.88:0,66,939	0/1:21,4:25:0.14:0,0,0	0/0:26,0:26:20.96:0,21,270	0/0:31,0:31:44.49:0,44,511	0/0:28,0:28:78.59:0,79,1001	1/1:17,2:19:9.34:78,9,0	0/0:33,0:32:91.86:0,92,1125	0/0:14,0:14:6.49:0,6,85	0/0:28,0:27:32.86:0,33,399	0/0:34,0:33:53.97:0,54,732	0/0:37,0:39:23.68:0,24,250	1/1:25,4:29:6.16:61,6,0	1/1:18,2:20:15.46:142,15,0	0/0:36,0:36:93.21:0,93,1323	0/0:24,0:24:63.18:0,63,893	0/0:14,0:13:36.09:0,36,505	0/0:27,0:27:2.73:0,3,25	0/0:28,0:25:15.44:0,15,200	0/0:22,0:22:9.34:0,9,131	0/0:19,0:19:11.46:0,11,161	0/0:26,0:26:10.85:0,11,179	0/1:16,3:19:0.23:0,0,0	0/0:44,0:44:99:0,117,1505	0/0:34,0:32:65.41:0,65,823	0/0:7,0:7:14.95:0,15,142
chr10	95393483	.	TACAA	T	1441.84	PASS	AB=0.760;AC=11;AF=0.196;AN=56;BaseQRankSum=4.431;DP=827;FS=32.844;HRun=0;HaplotypeScore=373.4944;InbreedingCoeff=0.8002;MQ=49.38;MQ0=2;MQRankSum=-6.180;QD=10.23;ReadPosRankSum=0.613;VQSLOD=1.9587;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,12:35:60.37:143,0,60	1/1:4,2:6:6.02:107,6,0	0/0:43,0:30:48.57:0,49,861	0/0:55,0:46:92.80:0,93,1599	0/0:5,13:18:8.29:0,8,18	0/0:25,0:25:68.69:0,69,1367	0/0:33,0:33:71.47:0,71,1129	0/0:43,0:42:99:0,107,2158	1/1:8,15:23:25.11:469,25,0	0/0:36,0:36:93.27:0,93,2171	0/0:14,0:14:38.51:0,39,525	0/0:33,0:32:84.90:0,85,1715	0/0:34,0:33:81.69:0,82,1576	0/0:38,0:38:79.96:0,80,1183	1/1:14,26:40:20.97:414,21,0	1/1:4,11:15:21.07:372,21,0	0/0:38,0:38:99:0,102,2407	0/0:24,0:24:57.62:0,58,1413	0/0:16,0:16:42.11:0,42,979	0/0:23,0:23:47.73:0,48,561	0/0:47,0:43:96.63:0,97,1901	0/0:28,0:28:73.73:0,74,951	0/0:21,0:21:51.38:0,51,762	0/0:33,0:32:55.47:0,55,918	1/1:5,14:19:2.40:101,2,0	0/0:42,0:42:99:0,117,2681	0/0:32,0:32:86.98:0,87,1768	0/0:10,0:10:27.09:0,27,683
chr10	95393519	.	C	CACAT	34940.01	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-6.180;DP=839;FS=0.385;HRun=0;HaplotypeScore=207.7982;InbreedingCoeff=0.9777;MQ=66.32;MQ0=0;MQRankSum=-9.914;QD=49.56;ReadPosRankSum=5.030;VQSLOD=5.3474;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:34:39.13:989,39,0	1/1:0,4:4:9.03:233,9,0	0/0:36,0:31:23.53:0,24,1086	0/0:40,0:37:74.87:0,75,1395	1/1:4,14:18:14.27:354,14,0	1/1:9,21:31:63.20:1568,63,0	1/1:3,26:31:57.20:1449,57,0	1/1:12,27:41:90.21:1944,90,0	1/1:6,22:28:46.23:1565,46,0	1/1:4,32:36:96.28:2343,96,0	1/1:4,12:16:30.10:668,30,0	1/1:7,28:35:78.27:2026,78,0	1/1:7,24:32:66.23:1695,66,0	1/1:14,21:35:57.20:1479,57,0	1/1:5,28:33:78.27:1978,78,0	1/1:6,17:24:57.18:1402,57,0	0/0:35,0:35:99:0,102,1741	0/0:22,0:22:63.18:0,63,1089	1/1:2,12:15:39.09:903,39,0	1/1:7,11:18:30.05:733,30,0	1/1:4,59:63:99:2882,111,0	1/1:4,21:25:45.15:1154,45,0	1/1:1,25:28:59.95:1549,60,0	1/1:3,30:33:66.23:1714,66,0	1/1:5,13:19:32.05:830,32,0	1/1:7,34:42:99:2604,105,0	1/1:7,31:37:78.27:2020,78,0	1/1:2,15:17:33.11:857,33,0
chr10	95394120	.	A	AAGG	26532.96	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-3.576;DP=734;FS=18.926;HRun=0;HaplotypeScore=112.7012;InbreedingCoeff=0.9800;MQ=76.11;MQ0=0;MQRankSum=-4.323;QD=42.73;ReadPosRankSum=1.745;VQSLOD=5.2370;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,36:44:84.29:1758,84,0	1/1:2,3:5:12.04:249,12,0	0/0:20,0:19:18.91:0,19,265	0/0:34,0:34:23.80:0,24,683	1/1:5,20:25:39.13:790,39,0	1/1:4,15:19:13.19:728,13,0	1/1:9,27:36:60.15:1211,60,0	1/1:18,0:18:39.02:415,39,0	1/1:5,9:14:35.15:696,35,0	1/1:5,26:32:78.25:1555,78,0	1/1:4,15:20:36.12:749,36,0	1/1:9,26:36:72.25:1506,72,0	1/1:3,24:28:72.25:1502,72,0	1/1:3,32:35:87.30:1819,87,0	1/1:8,31:39:87.26:1779,87,0	1/1:2,19:21:42.14:879,42,0	0/0:31,0:31:78.23:0,78,1105	0/0:28,0:28:65.21:0,65,1025	1/1:3,11:14:33.07:608,33,0	1/1:2,14:16:42.08:834,42,0	1/1:6,31:38:85.53:1762,86,0	1/1:4,17:22:51.17:1066,51,0	1/1:1,21:23:57.20:1192,57,0	1/1:9,28:39:63.22:1320,63,0	1/1:1,15:18:36.12:754,36,0	1/1:6,34:41:99:2073,105,0	1/1:6,18:23:51.17:1049,51,0	1/1:1,4:14:18.06:239,18,0
chr10	95394838	.	AC	A	10635.73	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=8.060;DP=553;FS=2.506;HRun=4;HaplotypeScore=76.9610;InbreedingCoeff=0.9980;MQ=82.34;MQ0=0;MQRankSum=-5.353;QD=31.94;ReadPosRankSum=2.206;VQSLOD=5.5499;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:78.23:0,78,1051	0/0:6,0:6:18.03:0,18,229	0/0:26,0:26:63.21:0,63,871	0/0:19,0:19:51.13:0,51,662	0/0:24,0:24:72.23:0,72,990	1/1:2,20:22:60.18:720,60,0	1/1:3,8:11:27.08:321,27,0	1/1:0,18:18:54.17:648,54,0	0/0:8,0:8:21.07:0,21,294	1/1:1,22:23:66.18:769,66,0	1/1:2,21:23:57.17:684,57,0	1/1:1,17:18:54.17:647,54,0	1/1:2,16:18:48.15:575,48,0	1/1:0,21:21:54.17:645,54,0	0/0:18,0:18:45.14:0,45,613	0/0:24,0:24:60.19:0,60,839	0/0:20,0:20:60.19:0,60,821	0/0:21,0:21:57.19:0,57,798	1/1:4,13:17:48.12:553,48,0	1/1:4,13:17:39.12:467,39,0	1/1:2,29:31:81.25:968,81,0	1/1:1,14:15:42.13:504,42,0	1/1:2,18:18:51.14:597,51,0	1/1:2,18:20:48.62:573,49,0	0/0:22,0:22:66.22:0,66,924	1/1:5,21:26:72.22:863,72,0	1/1:3,19:22:63.18:743,63,0	1/1:0,11:11:30.09:360,30,0
chr10	95394886	.	AT	A	10722.08	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=6.592;DP=542;FS=7.894;HRun=8;HaplotypeScore=94.4529;InbreedingCoeff=0.9092;MQ=73.47;MQ0=3;MQRankSum=-2.546;QD=23.99;ReadPosRankSum=2.597;VQSLOD=5.1959;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:30:66.10:637,66,0	1/1:0,4:4:12.01:112,12,0	0/0:33,0:21:44.39:0,44,397	0/0:18,0:10:0.03:0,0,54	1/1:3,27:30:74.97:701,75,0	1/1:3,20:23:63.09:604,63,0	1/1:2,12:14:36.06:347,36,0	1/1:5,19:24:59.85:540,60,0	1/1:0,6:6:15.02:145,15,0	1/1:10,16:26:66.07:623,66,0	1/1:2,20:22:62.92:581,63,0	1/1:4,13:17:48.04:452,48,0	1/1:1,17:18:51.07:488,51,0	1/1:2,10:12:36.03:338,36,0	1/1:2,12:14:24.03:232,24,0	1/1:2,14:16:30.05:290,30,0	0/0:21,0:21:60.14:0,60,689	0/0:23,0:23:69.08:0,69,772	1/1:5,23:27:68.93:634,69,0	1/1:3,15:18:50.99:470,51,0	1/1:5,9:14:30.03:283,30,0	1/1:2,7:9:27.03:255,27,0	1/1:4,17:19:54.06:509,54,0	1/1:5,12:17:42.04:394,42,0	1/1:4,18:22:51.08:492,51,0	1/1:2,20:22:62.59:589,63,0	1/1:0,17:17:51.08:492,51,0	1/1:6,17:23:54.07:515,54,0
chr10	95395220	.	G	GA	8858.82	PASS	AB=0.593;AC=33;AF=0.589;AN=56;BaseQRankSum=3.508;DP=588;FS=3.541;HRun=9;HaplotypeScore=81.2192;InbreedingCoeff=0.9290;MQ=76.53;MQ0=2;MQRankSum=-0.255;QD=25.38;ReadPosRankSum=0.383;VQSLOD=5.4326;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:26.98:0,27,234	0/0:13,0:13:38.99:0,39,338	0/0:39,0:30:35.28:0,35,352	0/0:18,0:16:22.14:0,22,153	0/0:21,0:21:59.98:0,60,521	1/1:1,20:21:60.16:662,60,0	0/1:5,11:16:10.14:337,0,10	1/1:6,22:27:57.53:592,58,0	0/0:16,0:16:44.95:0,45,382	1/1:5,20:26:59.98:636,60,0	1/1:5,12:17:39.06:413,39,0	1/1:1,13:14:30.08:332,30,0	1/1:3,18:21:51.14:564,51,0	1/1:3,21:24:57.15:630,57,0	0/0:22,0:22:50.97:0,51,443	0/0:15,0:15:38.99:0,39,339	0/0:31,0:31:71.96:0,72,621	0/0:30,0:29:77.98:0,78,677	1/1:3,16:19:27.91:511,28,0	1/1:6,16:22:45.07:481,45,0	1/1:2,15:17:39.11:431,39,0	1/1:3,16:19:22.08:470,22,0	1/1:6,17:23:56.47:584,56,0	1/1:2,5:7:17.72:176,18,0	0/0:18,0:19:53.01:0,53,445	1/1:4,25:29:75.18:819,75,0	1/1:4,33:36:93.24:1022,93,0	1/1:2,6:8:18.05:199,18,0
chr10	95395485	.	TTATATGGCCTTTAAG	T	2249.42	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.078;DP=761;FS=1.722;HRun=0;HaplotypeScore=310.2175;InbreedingCoeff=0.9025;MQ=85.73;MQ0=0;MQRankSum=-2.379;QD=66.16;ReadPosRankSum=-2.985;VQSLOD=2.6290;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,166,11269	0/0:10,0:10:30.10:0,30,2236	0/0:28,0:28:73.60:0,74,4603	0/0:23,0:23:55.05:0,55,2988	0/0:28,0:28:84.29:0,84,5783	0/0:20,0:20:60.21:0,60,4359	0/0:31,0:31:90.31:0,90,5984	1/1:9,21:30:63.20:2223,63,0	0/0:22,0:22:60.21:0,60,3933	0/0:30,0:30:87.29:0,87,6008	0/0:25,0:25:72.25:0,72,5173	0/0:35,0:35:99:0,102,7000	0/0:32,0:32:96.30:0,96,5994	0/0:22,0:22:63.22:0,63,4405	0/0:39,0:39:99:0,117,7914	0/0:27,0:27:78.27:0,78,5414	0/0:24,0:24:72.25:0,72,5365	0/0:15,0:15:45.15:0,45,3292	0/0:24,0:24:72.23:0,72,4412	0/0:38,0:38:99:0,114,7885	0/0:25,0:25:72.25:0,72,5274	0/0:26,0:26:72.25:0,72,5263	0/0:22,0:22:66.23:0,66,4545	0/0:34,0:34:96.33:0,96,6368	0/0:20,0:20:57.20:0,57,4050	0/0:43,0:43:99:0,129,9623	0/0:28,0:28:81.28:0,81,5690	1/1:1,3:4:3.01:135,3,0
chr10	95396120	.	TA	T	1788.29	PASS	AB=0.675;AC=41;AF=0.732;AN=56;BaseQRankSum=4.653;DP=586;FS=10.269;HRun=17;HaplotypeScore=68.6365;InbreedingCoeff=-0.1444;MQ=63.99;MQ0=6;MQRankSum=-0.114;QD=3.28;ReadPosRankSum=2.334;VQSLOD=-0.7256;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:43:35.25:109,35,0	1/1:5,0:10:7.90:23,8,0	0/0:26,1:11:2.97:0,3,20	0/0:13,0:6:0.13:0,0,22	1/1:9,0:29:32.28:93,32,0	0/1:12,2:14:25.40:65,0,25	0/1:5,7:13:25.27:66,0,25	1/1:11,0:21:20.23:58,20,0	1/1:7,0:15:12.94:45,13,0	0/1:14,12:26:39.32:93,0,39	1/1:12,9:22:18.68:103,19,0	0/1:6,12:19:23.23:67,0,23	1/1:5,7:13:9.76:44,10,0	0/1:9,10:22:11.45:74,0,11	0/1:6,1:18:3.89:37,0,4	1/1:3,0:18:25.31:80,25,0	1/1:8,13:22:9.82:143,10,0	0/1:13,7:24:70.53:116,0,71	0/1:16,12:29:8.44:122,0,8	1/1:5,7:12:17.23:99,17,0	1/1:3,1:8:6.39:27,6,0	0/1:9,9:19:44.79:48,0,45	0/1:11,6:19:38.76:50,0,39	1/1:5,13:20:21.50:137,22,0	1/1:15,0:27:12.80:45,13,0	0/1:19,5:29:17.69:80,0,18	1/1:19,9:29:1.76:90,2,0	1/1:8,0:15:10.04:29,10,0
chr10	95396508	.	TGG	T	626.86	PASS	AB=0.900;AC=23;AF=0.676;AN=34;BaseQRankSum=5.733;DP=153;FS=1.009;HRun=4;HaplotypeScore=26.8994;InbreedingCoeff=0.4168;MQ=49.29;MQ0=32;MQRankSum=-5.216;QD=13.63;ReadPosRankSum=3.096;VQSLOD=0.2310;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:4:2.22:0,2,7	1/1:1,1:2:2.63:43,3,0	0/1:8,1:6:23.55:24,0,210	0/0:13,0:8:17.87:0,18,261	1/1:2,3:3:9.03:129,9,0	1/1:1,1:1:3.01:43,3,0	./.	./.	1/1:1,1:2:3.01:43,3,0	1/1:2,1:2:3.01:43,3,0	1/1:2,2:2:3.01:43,3,0	./.	1/1:0,3:3:3.01:43,3,0	./.	./.	./.	0/0:35,0:34:87.27:0,87,1582	0/0:26,1:26:35.32:0,35,1332	./.	1/1:0,3:3:9.03:129,9,0	1/1:4,3:3:9.03:129,9,0	./.	1/1:3,1:1:3.01:43,3,0	0/0:2,0:2:3.01:0,3,56	1/1:1,1:1:3.01:43,3,0	./.	./.	./.
chr10	95396830	.	T	TG	1080.77	PASS	AB=0.944;AC=29;AF=0.518;AN=56;BaseQRankSum=-0.428;DP=291;FS=0.000;HRun=7;HaplotypeScore=66.6456;InbreedingCoeff=0.3782;MQ=77.57;MQ0=1;MQRankSum=-2.154;QD=6.55;ReadPosRankSum=-2.628;VQSLOD=-0.3490;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:29.20:329,29,0	1/1:2,1:3:6.01:61,6,0	0/0:15,0:13:8.79:0,9,116	0/0:18,0:15:29.02:0,29,226	1/1:1,2:3:6.02:72,6,0	0/0:9,0:9:6.35:0,6,23	0/1:15,0:15:3.80:63,0,4	0/0:16,0:16:24.01:0,24,227	1/1:2,9:11:17.80:176,18,0	0/1:10,0:10:15.25:21,0,15	0/1:6,0:6:0:0,0,0	0/0:11,0:11:0.63:0,1,3	0/0:7,0:7:0.02:0,0,1	0/1:9,0:9:0.14:15,0,0	0/1:4,7:11:20:47,0,20	1/1:2,8:10:12.04:145,12,0	0/0:21,0:21:29.86:0,30,280	0/0:18,0:18:29.83:0,30,280	0/0:6,0:6:1.01:0,1,3	1/1:4,0:4:1.31:19,1,0	1/1:18,0:18:5.18:48,5,0	0/1:7,0:7:2.07:40,0,2	1/1:6,0:6:1.19:20,1,0	1/1:5,0:5:3.91:22,4,0	1/1:2,4:6:11.99:126,12,0	1/1:11,0:11:2.74:25,3,0	0/1:10,0:10:7.30:16,0,7	0/0:5,0:5:12.02:0,12,114
chr10	95398731	.	AAC	A	9703.88	PASS	AB=0.943;AC=33;AF=0.589;AN=56;BaseQRankSum=-1.651;DP=638;FS=4.316;HRun=0;HaplotypeScore=97.3897;InbreedingCoeff=0.9039;MQ=70.17;MQ0=7;MQRankSum=-0.044;QD=22.51;ReadPosRankSum=2.445;VQSLOD=5.0655;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,28:39:78.24:934,78,0	0/0:2,0:8:15.01:0,15,148	0/1:31,2:26:33.24:33,0,465	0/0:26,0:16:23.31:0,23,282	0/0:1,0:14:30:0,30,286	1/1:6,20:26:54:629,54,0	1/1:7,28:36:81.08:955,81,0	0/0:4,0:16:42.46:0,42,369	0/0:3,1:17:8.83:0,9,377	1/1:4,9:14:26.90:291,27,0	1/1:4,17:21:8.99:470,9,0	1/1:3,21:23:54.16:651,54,0	1/1:4,13:17:33.10:398,33,0	1/1:8,13:21:36.10:434,36,0	0/0:5,0:12:27.03:0,27,299	0/0:2,0:18:38.99:0,39,343	0/0:34,0:34:87.27:0,87,1364	0/0:34,0:34:93.28:0,93,1452	1/1:5,6:11:18.04:205,18,0	1/1:2,9:11:27.08:326,27,0	1/1:8,38:47:99:1222,105,0	1/1:6,16:24:44.97:521,45,0	1/1:2,14:16:42.13:507,42,0	1/1:10,23:33:63.19:760,63,0	0/0:4,0:19:47.98:0,48,435	1/1:8,18:27:57:665,57,0	1/1:9,21:29:60.02:702,60,0	0/0:2,0:8:18:0,18,158
chr10	95399481	.	G	GC	9279.66	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-13.627;DP=612;FS=0.323;HRun=7;HaplotypeScore=60.3502;InbreedingCoeff=0.9906;MQ=83.81;MQ0=0;MQRankSum=-2.547;QD=28.04;ReadPosRankSum=-0.504;VQSLOD=5.1913;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:90.12:0,90,867	0/0:9,0:9:21.03:0,21,203	0/0:17,0:17:34.88:0,35,385	0/0:22,0:22:48.03:0,48,446	0/0:14,0:14:27.03:0,27,261	1/1:4,22:26:60.18:723,60,0	1/1:1,18:19:54.17:652,54,0	0/0:23,0:23:50.53:0,51,461	0/0:24,0:24:63.10:0,63,608	1/1:5,17:22:51.16:616,51,0	1/1:0,7:7:15.05:180,15,0	1/1:2,15:17:33.10:398,33,0	1/1:2,21:23:45.14:544,45,0	1/1:3,26:29:75.23:906,75,0	0/0:25,0:25:69.08:0,69,655	0/0:25,0:25:72.09:0,72,684	0/0:37,0:37:99:0,102,978	0/0:23,0:23:63.10:0,63,608	1/1:3,12:15:36.11:434,36,0	1/1:2,6:9:14.10:211,14,0	1/1:5,49:54:99:1587,132,0	1/1:1,9:10:24.07:290,24,0	1/1:2,9:12:13.78:211,14,0	1/1:2,35:37:96.29:1160,96,0	0/0:16,0:16:39.03:0,39,370	1/1:4,22:26:64.07:752,64,0	1/1:4,21:25:51.16:615,51,0	0/0:9,0:9:21.02:0,21,203
chr10	95400230	.	G	GCTTT	5540.28	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=0.339;DP=377;FS=0.522;HRun=0;HaplotypeScore=84.5973;InbreedingCoeff=0.2372;MQ=69.46;MQ0=4;MQRankSum=-4.375;QD=19.24;ReadPosRankSum=0.746;VQSLOD=4.2319;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:13.24:89,0,13	0/1:8,0:8:21.48:78,0,21	0/0:23,0:12:14.92:0,15,133	0/0:12,0:8:14.77:0,15,126	0/1:17,0:16:63.45:63,0,79	1/1:11,1:11:24.01:333,24,0	1/1:13,1:13:25.97:416,26,0	0/1:25,0:24:99:107,0,116	0/1:3,0:2:8.63:9,0,21	1/1:9,2:11:17.98:246,18,0	1/1:15,1:16:42.05:695,42,0	1/1:5,1:6:11.99:142,12,0	1/1:5,0:5:15.02:177,15,0	1/1:11,1:12:21.02:282,21,0	0/1:8,0:8:5.98:37,0,6	0/1:11,0:11:17.53:68,0,18	0/0:30,0:29:75.08:0,75,949	0/0:24,0:21:41.54:0,42,691	1/1:18,0:16:5.93:323,6,0	1/1:12,0:12:20.98:262,21,0	1/1:7,0:7:12:145,12,0	1/1:11,1:11:23.98:304,24,0	1/1:14,2:16:36.06:555,36,0	1/1:7,0:6:14.79:148,15,0	0/1:7,0:6:30.58:31,0,57	1/1:12,2:13:33.04:499,33,0	1/1:20,1:21:32.71:449,33,0	0/1:14,0:14:49.46:85,0,49
chr10	95400231	.	C	CTTTT	8825.66	PASS	AB=0.929;AC=48;AF=0.857;AN=56;BaseQRankSum=2.644;DP=510;FS=11.661;HRun=16;HaplotypeScore=156.2121;InbreedingCoeff=0.6286;MQ=60.33;MQ0=9;MQRankSum=-6.795;QD=20.01;ReadPosRankSum=-3.795;VQSLOD=0.9798;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:47.38:649,47,0	1/1:8,1:10:18:257,18,0	0/1:22,0:11:3.42:3,0,12	0/0:12,0:8:2.49:0,2,32	1/1:21,0:22:11.45:497,11,0	1/1:11,0:14:21.01:309,21,0	1/1:18,0:19:33.09:437,33,0	1/1:27,2:33:63.58:651,64,0	1/1:10,0:9:20.91:246,21,0	1/1:16,0:16:2.66:236,3,0	1/1:19,0:23:51.16:712,51,0	1/1:9,0:9:9.03:164,9,0	1/1:9,0:9:21.02:326,21,0	1/1:14,0:15:21.67:227,22,0	1/1:3,8:11:12.04:203,12,0	1/1:9,9:18:24.50:382,24,0	0/0:24,0:29:41.04:0,41,370	0/0:26,0:23:31.57:0,32,396	0/1:20,0:22:5.98:368,0,6	1/1:19,0:21:30.03:429,30,0	1/1:6,0:7:9.03:126,9,0	1/1:12,0:14:19.88:329,20,0	1/1:18,0:21:36.11:554,36,0	1/1:9,0:9:11.88:141,12,0	1/1:8,1:10:12.45:156,12,0	1/1:20,0:23:40.06:472,40,0	1/1:24,0:28:37.73:569,38,0	1/1:9,3:20:33.21:382,33,0
chr10	95400252	.	C	CT	2738.54	PASS	AB=0.845;AC=30;AF=0.536;AN=56;BaseQRankSum=-3.043;DP=432;FS=12.199;HRun=8;HaplotypeScore=68.6012;InbreedingCoeff=0.7383;MQ=37.42;MQ0=25;MQRankSum=-1.553;QD=11.13;ReadPosRankSum=-1.960;VQSLOD=0.8755;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:20:25.85:0,26,245	0/0:8,0:8:8.92:0,9,78	0/0:5,0:2:2.96:0,3,19	0/0:5,0:1:3:0,3,27	0/0:16,0:16:16.88:0,17,139	1/1:6,8:13:12.51:139,13,0	1/1:11,6:14:24.03:262,24,0	0/0:31,0:28:44.76:0,45,411	0/0:12,0:11:17.98:0,18,163	1/1:8,7:14:21.06:241,21,0	1/1:14,7:19:2.50:247,3,0	1/1:2,5:7:12.04:139,12,0	1/1:6,5:11:13.81:141,14,0	1/1:5,6:10:13.28:141,13,0	0/0:11,0:11:20.33:0,20,191	0/0:14,0:13:18:0,18,164	0/1:24,0:20:2.62:3,0,144	0/0:32,0:26:29.72:0,30,257	0/1:11,9:18:17.95:309,0,18	1/1:7,14:20:20.98:213,21,0	1/1:3,1:3:3.89:37,4,0	1/1:7,5:11:9.03:101,9,0	1/1:9,9:17:11.99:124,12,0	1/1:4,6:8:15.95:159,16,0	0/0:10,0:9:8.99:0,9,82	1/1:11,11:20:36.55:402,37,0	1/1:11,8:19:29.59:289,30,0	0/0:17,0:16:26.53:0,27,207
chr10	95402715	.	G	GA	4768.38	PASS	AB=0.605;AC=28;AF=0.500;AN=56;BaseQRankSum=-8.484;DP=605;FS=2.153;HRun=13;HaplotypeScore=86.7236;InbreedingCoeff=0.7051;MQ=76.18;MQ0=2;MQRankSum=0.370;QD=13.47;ReadPosRankSum=-1.219;VQSLOD=4.7680;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,32:40:58.56:534,59,0	0/0:1,0:9:16.29:0,16,47	0/0:25,0:20:3.02:0,3,85	0/0:12,0:12:5.28:0,5,36	0/0:6,0:28:34.72:0,35,103	0/1:5,7:12:20.14:118,0,20	1/1:5,9:16:12.26:232,12,0	0/0:22,0:22:53.42:0,53,367	0/0:3,0:15:22.38:0,22,65	1/1:6,7:14:26.65:208,27,0	0/1:5,7:14:1.67:91,0,2	0/1:3,7:10:5.55:96,0,6	1/1:5,16:21:27.03:251,27,0	1/1:3,13:17:26.19:272,26,0	0/0:3,0:26:34.61:0,35,100	0/0:5,0:28:45.74:0,46,144	0/0:31,0:32:85.23:0,85,573	0/0:21,0:21:52.49:0,52,348	1/1:6,23:30:54.60:593,55,0	1/1:6,18:27:11.20:355,11,0	0/1:8,17:26:2.25:248,0,2	1/1:5,9:15:22.06:175,22,0	1/1:9,15:26:32.80:282,33,0	1/1:2,12:14:10.33:206,10,0	0/0:2,0:13:18.31:0,18,53	1/1:5,20:25:60.02:541,60,0	1/1:9,37:47:34.78:566,35,0	0/0:16,1:18:3.90:0,4,163
chr10	95403151	.	ATGTGTGTGTGTG	A	7519.40	PASS	AB=0.836;AC=32;AF=0.571;AN=56;BaseQRankSum=9.554;DP=668;FS=0.000;HRun=0;HaplotypeScore=247.7015;InbreedingCoeff=0.6352;MQ=48.31;MQ0=25;MQRankSum=-1.061;QD=18.43;ReadPosRankSum=-0.231;VQSLOD=3.4944;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:52:48.11:0,48,1622	0/1:17,0:18:0.95:1,0,472	0/1:23,0:11:0.21:0,0,334	0/0:38,0:15:43.76:0,44,533	0/0:17,0:14:26.58:0,27,412	1/1:15,3:18:35.80:561,36,0	1/1:22,0:22:45.38:698,45,0	0/0:32,0:31:84.25:0,84,1292	0/1:36,0:35:21.96:22,0,509	1/1:0,20:20:42.06:598,42,0	0/1:1,10:11:0.58:1,0,1	1/1:10,4:14:1.99:401,2,0	1/1:15,3:17:38.53:594,39,0	1/1:9,5:14:32.74:553,33,0	0/0:42,0:42:8.83:0,9,718	0/1:32,0:32:99:112,0,421	0/0:25,0:24:60.20:0,60,2012	0/0:27,0:26:60.21:0,60,1670	1/1:10,0:10:4.98:295,5,0	1/1:1,23:24:6.02:70,6,0	1/1:43,0:40:59.78:898,60,0	1/1:2,14:14:3.01:34,3,0	0/1:3,15:18:0.28:0,0,0	1/1:15,3:18:20.87:336,21,0	0/0:17,0:16:26.59:0,27,434	1/1:0,28:28:78.06:1174,78,0	1/1:19,6:24:69.15:1172,69,0	0/0:10,0:10:19.86:0,20,257
chr10	95403281	.	GTA	G	16354.82	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=18.911;DP=1139;FS=0.000;HRun=0;HaplotypeScore=292.7672;InbreedingCoeff=0.9996;MQ=54.91;MQ0=4;MQRankSum=-0.369;QD=24.12;ReadPosRankSum=5.082;VQSLOD=4.3790;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:81.26:0,81,1405	0/0:21,0:21:51.17:0,51,891	0/0:35,0:22:53.14:0,53,842	0/0:38,0:27:39.51:0,40,625	0/0:29,0:29:78.22:0,78,1279	1/1:2,24:26:26.88:370,27,0	1/1:0,46:46:71.46:987,71,0	0/0:52,0:52:99:0,120,1862	0/0:41,0:41:53.19:0,53,845	1/1:3,47:51:99:1687,115,0	1/1:3,23:26:57.19:782,57,0	1/1:5,42:47:59.69:819,60,0	1/1:6,37:43:71.70:985,72,0	1/1:1,41:42:52.87:659,53,0	0/0:49,0:48:77.70:0,78,1208	0/0:50,0:50:53.53:0,54,923	0/0:21,0:21:51.08:0,51,827	0/0:18,0:18:48.12:0,48,779	1/1:0,8:8:24.05:293,24,0	1/1:2,29:31:56.70:782,57,0	1/1:8,146:154:99:3829,279,0	1/1:2,50:52:68.82:946,69,0	1/1:1,31:32:46.14:657,46,0	1/1:1,46:47:84.28:1153,84,0	0/0:24,0:24:66.20:0,66,1114	1/1:2,45:47:99:1584,123,0	1/1:0,26:26:60.19:822,60,0	0/0:30,0:30:84.25:0,84,1429
chr10	95404489	.	T	TTTG	2695.61	PASS	AB=0.867;AC=12;AF=0.214;AN=56;BaseQRankSum=6.332;DP=630;FS=36.884;HRun=0;HaplotypeScore=165.2974;InbreedingCoeff=-0.2726;MQ=53.96;MQ0=8;MQRankSum=-9.814;QD=12.31;ReadPosRankSum=-0.146;VQSLOD=1.2358;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:50.79:0,51,787	0/0:17,0:17:51.15:0,51,783	0/0:36,0:15:37.67:0,38,569	0/0:35,0:20:39.50:0,39,646	0/0:27,0:27:78.27:0,78,1319	0/1:17,4:21:99:333,0,401	0/0:14,0:14:36.08:0,36,519	0/0:33,0:32:84.75:0,85,1392	0/0:14,0:14:30.75:0,31,619	0/1:17,3:19:99:147,0,522	0/1:8,1:9:78.28:78,0,226	0/1:13,3:15:99:216,0,340	0/1:12,1:13:99:100,0,301	0/1:16,2:16:99:155,0,396	0/0:29,0:29:84.29:0,84,1407	0/0:18,0:18:54.18:0,54,900	0/0:38,0:38:80.90:0,81,1646	0/0:39,0:39:99:0,105,1777	0/0:21,0:17:44.62:0,45,548	0/1:19,4:23:99:352,0,489	0/0:7,0:7:18.06:0,18,263	0/1:9,4:12:99:244,0,215	0/1:20,4:24:99:333,0,435	0/1:7,0:7:16.36:16,0,222	0/0:27,0:27:75.23:0,75,1249	0/1:23,4:27:99:305,0,677	0/1:20,8:27:99:569,0,593	0/0:12,0:12:36.12:0,36,614
chr10	95404496	.	TTG	T	5238.46	PASS	AB=0.675;AC=17;AF=0.304;AN=56;BaseQRankSum=7.967;DP=638;FS=91.916;HRun=0;HaplotypeScore=141.2161;InbreedingCoeff=-0.1075;MQ=51.42;MQ0=9;MQRankSum=-9.787;QD=20.54;ReadPosRankSum=-0.404;VQSLOD=1.6305;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:10.24:0,10,406	0/0:16,0:16:48.16:0,48,890	0/0:39,0:15:27.03:0,27,545	0/0:37,0:19:49.76:0,50,736	0/0:27,0:27:81.17:0,81,1492	0/1:11,8:19:99:337,0,141	0/1:2,12:14:12.64:419,0,13	0/0:36,0:33:58.58:0,59,1397	0/0:15,0:15:43.70:0,44,782	0/1:8,12:19:99:450,0,187	0/1:6,4:10:27.88:164,0,28	0/1:11,5:15:99:252,0,171	0/1:6,6:12:30.62:225,0,31	0/1:8,9:15:92.20:344,0,92	0/0:28,0:28:84.29:0,84,1593	0/0:18,0:18:48.13:0,48,875	0/0:40,0:40:99:0,101,2013	0/0:41,0:41:99:0,120,2136	0/1:9,11:16:90.79:411,0,91	0/1:14,10:24:99:489,0,114	1/1:3,5:7:16.51:217,17,0	0/1:9,4:12:49.04:167,0,49	0/1:12,11:23:99:392,0,220	1/1:3,4:7:10.87:170,11,0	0/0:27,0:27:81.26:0,81,1482	0/1:11,14:25:99:615,0,209	0/1:14,13:26:99:585,0,143	0/0:13,0:13:36.12:0,36,682
chr10	95404511	.	GT	G	2940.80	PASS	AB=0.719;AC=14;AF=0.250;AN=56;BaseQRankSum=10.906;DP=588;FS=111.348;HRun=4;HaplotypeScore=130.5352;InbreedingCoeff=-0.2988;MQ=47.93;MQ0=11;MQRankSum=-11.866;QD=11.53;ReadPosRankSum=3.152;VQSLOD=-0.3550;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:41:2.40:38,0,2	0/0:16,0:16:48.12:0,48,661	0/0:36,0:13:32.86:0,33,418	0/0:31,1:14:24.02:0,24,347	0/0:28,0:28:84.27:0,84,1191	0/1:13,5:18:99:129,0,375	0/1:5,3:8:12.25:187,0,12	0/0:30,0:25:23:0,23,596	0/0:17,0:17:50.73:0,51,661	0/1:8,11:17:99:321,0,150	0/1:5,3:8:87.20:87,0,177	0/1:7,6:12:99:171,0,211	0/1:6,5:10:99:163,0,145	0/1:9,9:16:99:275,0,206	0/0:30,0:30:84.27:0,84,1191	0/0:18,0:17:54.18:0,54,776	0/0:38,1:39:99:0,114,1610	0/0:38,0:38:99:0,111,1549	0/1:14,7:17:99:218,0,189	0/1:10,11:21:99:337,0,328	0/0:4,2:5:0.03:0,0,75	0/1:9,3:12:78.07:78,0,288	0/1:9,10:19:99:308,0,232	0/0:3,1:4:3.01:0,3,43	0/0:27,0:27:78.26:0,78,1122	0/1:7,13:20:99:416,0,237	0/1:14,12:26:99:365,0,445	0/0:4,0:12:32.89:0,33,291
chr10	95404514	.	TG	T	1490.29	PASS	AB=0.995;AC=18;AF=0.321;AN=56;BaseQRankSum=11.466;DP=569;FS=108.670;HRun=1;HaplotypeScore=131.0388;InbreedingCoeff=-0.1734;MQ=48.10;MQ0=10;MQRankSum=-12.351;QD=5.36;ReadPosRankSum=3.095;VQSLOD=-0.0479;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:38,1:39:20.46:142,20,0	0/0:15,0:15:45.08:0,45,626	0/0:32,0:11:31.32:0,31,414	0/0:30,0:13:35.80:0,36,420	0/0:28,0:28:84.28:0,84,1250	0/1:18,0:18:54.36:54,0,371	1/1:6,1:7:4.19:95,4,0	0/1:25,2:22:39.08:39,0,513	0/0:16,0:16:47.71:0,48,635	0/1:18,0:16:99:139,0,167	0/1:8,0:8:39.73:40,0,172	0/1:13,0:12:99:105,0,201	0/1:11,0:10:79.38:79,0,151	0/1:18,0:16:99:160,0,262	0/0:29,0:29:87.26:0,87,1252	0/0:19,0:18:57.18:0,57,833	0/0:41,0:41:99:0,120,1745	0/0:39,0:39:99:0,117,1678	0/1:20,0:16:96.12:96,0,184	0/1:20,0:20:99:178,0,339	0/1:5,0:4:0.34:0,0,42	0/1:12,0:12:26.53:27,0,325	0/1:18,0:18:99:151,0,239	0/0:4,0:4:2.68:0,3,44	0/0:27,0:27:81.25:0,81,1172	0/1:20,0:20:99:188,0,233	0/1:24,0:24:99:162,0,461	0/0:10,0:10:26.97:0,27,257
chr10	95404522	.	T	TTTG	2607.48	PASS	AB=0.822;AC=15;AF=0.268;AN=56;BaseQRankSum=7.164;DP=555;FS=52.110;HRun=0;HaplotypeScore=147.2500;InbreedingCoeff=-0.3436;MQ=49.12;MQ0=8;MQRankSum=-8.558;QD=12.36;ReadPosRankSum=2.171;VQSLOD=0.9376;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:21.86:0,22,246	0/0:14,0:14:42.13:0,42,653	0/0:32,0:14:34.81:0,35,449	0/0:28,0:13:15.86:0,16,273	0/0:30,0:30:84.29:0,84,1339	0/1:16,1:17:41.14:41,0,559	0/1:3,2:5:10.24:103,0,10	0/0:25,0:19:15.36:0,15,388	0/0:15,0:15:42.14:0,42,669	0/1:13,6:17:99:284,0,253	0/1:5,3:8:82.15:82,0,176	0/1:10,3:12:99:132,0,236	0/1:8,2:9:99:152,0,156	0/1:12,5:15:99:264,0,270	0/0:28,0:28:81.27:0,81,1276	0/0:21,0:20:60.19:0,60,938	0/0:39,0:39:99:0,114,1804	0/0:39,0:39:99:0,108,1705	0/1:13,4:15:88.93:239,0,89	0/1:13,7:20:99:321,0,386	0/1:4,0:3:1.21:1,0,43	0/1:10,2:12:70.02:70,0,386	0/1:15,3:18:99:133,0,310	0/0:4,0:4:8.98:0,9,114	0/0:27,0:27:81.28:0,81,1298	0/1:13,5:18:99:307,0,288	0/1:14,9:23:99:450,0,514	0/1:10,0:10:23.50:183,0,24
chr10	95406120	.	GACTC	G	16470.79	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=16.033;DP=685;FS=0.613;HRun=0;HaplotypeScore=126.1247;InbreedingCoeff=0.9906;MQ=92.32;MQ0=3;MQRankSum=-6.940;QD=45.00;ReadPosRankSum=4.221;VQSLOD=5.5794;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,2954	0/0:12,0:12:36.12:0,36,967	0/0:24,0:24:63.15:0,63,1519	0/0:37,0:37:93.29:0,93,2183	0/0:14,0:14:42.14:0,42,1146	1/1:1,16:17:42.14:801,42,0	1/1:3,31:34:84.29:1620,84,0	0/0:21,0:21:54.18:0,54,1448	0/0:32,0:32:96.33:0,96,2621	1/1:0,19:19:57.18:1054,57,0	1/1:1,6:7:18.06:333,18,0	1/1:3,39:43:99:2086,108,0	1/1:3,33:35:87.09:1670,87,0	1/1:0,32:33:84.29:1627,84,0	0/0:32,0:32:96.33:0,96,2584	0/0:31,0:31:93.31:0,93,2489	0/0:34,0:34:99:0,102,2733	0/0:22,0:22:66.19:0,66,1742	1/1:1,14:15:36.08:628,36,0	1/1:0,5:5:9.03:174,9,0	1/1:3,45:48:93.01:1797,93,0	1/1:0,15:16:36.12:697,36,0	1/1:0,13:13:27.05:475,27,0	1/1:3,33:34:69.24:1337,69,0	0/0:10,0:10:30.10:0,30,802	1/1:2,13:15:42.12:778,42,0	1/1:2,27:29:72.25:1393,72,0	0/0:11,0:11:30.10:0,30,821
chr10	95406771	.	GGT	G	12273.22	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=16.411;DP=654;FS=4.522;HRun=0;HaplotypeScore=110.6916;InbreedingCoeff=0.9931;MQ=72.04;MQ0=0;MQRankSum=-5.826;QD=33.81;ReadPosRankSum=0.621;VQSLOD=7.1144;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,2033	0/0:8,0:8:24.08:0,24,439	0/0:17,0:16:14.72:0,15,558	0/0:19,0:18:44.65:0,45,645	0/0:10,0:10:30.09:0,30,502	1/1:3,22:25:63.21:941,63,0	1/1:2,43:45:93.07:1364,93,0	0/0:31,0:31:90.27:0,90,1495	0/0:26,0:26:75.08:0,75,1176	1/1:2,12:14:36.04:437,36,0	1/1:1,8:9:21.03:295,21,0	1/1:5,40:45:99:1558,102,0	1/1:2,18:20:40.22:598,40,0	1/1:3,32:35:96.33:1468,96,0	0/0:31,0:31:90.31:0,90,1643	0/0:21,0:21:63.22:0,63,1153	0/0:35,0:35:99:0,105,1849	0/0:33,0:33:99:0,99,1674	1/1:2,16:18:45.02:674,45,0	1/1:1,8:9:15.01:202,15,0	1/1:3,34:37:69.19:1021,69,0	1/1:3,15:18:42.10:605,42,0	1/1:1,11:12:24.08:351,24,0	1/1:3,31:34:69.23:1055,69,0	0/0:15,0:15:45.15:0,45,821	1/1:3,15:18:48.15:702,48,0	1/1:4,20:24:66.22:1003,66,0	0/0:6,0:6:18.06:0,18,324
chr10	95406772	.	GT	G	4855.66	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=18.366;DP=648;FS=3.969;HRun=1;HaplotypeScore=124.6363;InbreedingCoeff=0.9917;MQ=71.55;MQ0=0;MQRankSum=-4.237;QD=13.60;ReadPosRankSum=0.761;VQSLOD=4.1715;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1603	0/0:9,0:9:24.08:0,24,351	0/0:17,0:16:12.88:0,13,449	0/0:18,0:17:47.37:0,47,541	0/0:10,0:10:30.08:0,30,397	1/1:22,3:25:61.33:354,61,0	1/1:43,0:43:90.67:541,91,0	0/0:30,0:30:90.27:0,90,1232	0/0:26,0:26:75.04:0,75,932	1/1:12,1:13:35.44:243,35,0	1/1:9,0:9:20.51:122,21,0	1/1:40,5:45:99:579,99,0	1/1:19,1:20:39.85:226,40,0	1/1:32,3:35:93.60:543,94,0	0/0:30,0:30:90.30:0,90,1313	0/0:22,0:22:63.21:0,63,921	0/0:36,0:36:99:0,108,1511	0/0:33,0:33:99:0,99,1330	1/1:17,1:18:52.94:331,53,0	1/1:8,0:8:14.71:91,15,0	1/1:34,2:36:67.33:398,67,0	1/1:15,3:18:41.07:252,41,0	1/1:11,1:12:23.52:144,24,0	1/1:31,3:34:67.32:394,67,0	0/0:15,0:15:45.15:0,45,653	1/1:15,2:17:46.26:270,46,0	1/1:20,4:23:64.09:369,64,0	0/0:6,0:6:18.06:0,18,261
chr10	95407439	.	C	CA	10260.99	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=3.816;DP=444;FS=1.338;HRun=1;HaplotypeScore=96.6959;InbreedingCoeff=0.9566;MQ=84.33;MQ0=0;MQRankSum=-3.466;QD=40.08;ReadPosRankSum=2.318;VQSLOD=5.1996;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:87.30:1389,87,0	0/0:1,0:1:3.01:0,3,42	0/0:23,0:22:54.05:0,54,649	0/0:15,0:14:35.69:0,36,440	0/0:9,0:9:27.09:0,27,370	1/1:0,7:7:21.07:335,21,0	1/1:0,23:23:63.21:1006,63,0	0/0:16,0:16:48.15:0,48,656	0/0:15,0:15:36.12:0,36,502	1/1:0,17:17:51.17:806,51,0	1/1:0,11:11:21.07:335,21,0	1/1:1,22:23:51.17:814,51,0	1/1:0,12:12:33.11:527,33,0	1/1:0,18:18:48.16:767,48,0	0/0:20,0:20:54.18:0,54,754	0/0:20,0:20:57.19:0,57,795	0/0:28,0:28:58.24:0,58,1028	0/0:28,0:28:81.23:0,81,1109	1/1:0,14:14:42.07:577,42,0	1/1:0,6:6:12.04:192,12,0	1/1:2,43:45:96.33:1534,96,0	1/1:0,9:9:27.09:426,27,0	1/1:0,4:4:9:144,9,0	1/1:0,16:16:39.13:622,39,0	0/0:9,0:9:27.05:0,27,354	1/1:0,10:10:30.07:453,30,0	1/1:0,8:7:21.07:335,21,0	0/0:4,0:4:12.04:0,12,160
chr10	95408523	.	G	GA	10983.21	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=15.881;DP=690;FS=0.000;HRun=7;HaplotypeScore=120.0727;InbreedingCoeff=0.9893;MQ=76.77;MQ0=1;MQRankSum=-1.730;QD=30.34;ReadPosRankSum=1.790;VQSLOD=3.3800;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,117,1094	0/0:10,0:10:27.04:0,27,261	0/0:19,0:18:8.06:0,8,258	0/0:25,0:26:19.81:0,20,238	0/0:21,0:21:54.09:0,54,521	1/1:2,18:20:57.12:670,57,0	1/1:3,21:24:66.13:772,66,0	0/0:23,0:23:60.08:0,60,573	0/0:28,0:28:69.10:0,69,666	1/1:4,18:22:63.15:743,63,0	1/1:0,17:17:51.16:612,51,0	1/1:3,21:24:66.20:795,66,0	1/1:7,15:22:51.16:614,51,0	1/1:7,18:25:63.18:744,63,0	0/0:26,0:26:63.08:0,63,603	0/0:34,0:34:87.10:0,87,824	0/0:40,0:40:99:0,99,956	0/0:26,0:26:75.12:0,75,724	1/1:5,16:21:54.11:634,54,0	1/1:2,11:13:30.09:360,30,0	1/1:4,27:31:81.18:959,81,0	1/1:2,18:20:57.01:664,57,0	1/1:4,12:16:39.05:451,39,0	1/1:7,40:46:99:1303,108,0	0/0:15,0:15:33.04:0,33,314	1/1:7,25:32:87.20:1006,87,0	1/1:11,17:26:57.13:657,57,0	0/0:14,0:14:33.05:0,33,319
chr10	95408532	.	GAA	G	10560.20	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=16.358;DP=681;FS=0.299;HRun=9;HaplotypeScore=130.9437;InbreedingCoeff=0.9996;MQ=74.20;MQ0=1;MQRankSum=-3.109;QD=28.93;ReadPosRankSum=2.324;VQSLOD=4.0075;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:0,0:44:94.82:0,95,334	0/0:11,0:11:30.10:0,30,490	0/0:17,0:15:25.13:0,25,323	0/0:24,0:24:50.53:0,51,675	0/0:18,0:18:48.16:0,48,788	1/1:1,20:21:54.15:628,54,0	1/1:2,26:28:66.08:745,66,0	0/0:29,0:30:87.21:0,87,1314	0/0:27,0:27:69.22:0,69,1110	1/1:3,20:23:66.20:768,66,0	1/1:0,22:22:60.17:695,60,0	1/1:1,20:21:60.18:697,60,0	1/1:3,16:19:54.16:627,54,0	1/1:5,17:22:60.09:666,60,0	0/0:25,0:25:63.21:0,63,1011	0/0:33,0:33:84.29:0,84,1376	0/0:34,0:34:93.32:0,93,1520	0/0:23,0:24:65.64:0,66,986	1/1:3,19:22:57.10:635,57,0	1/1:6,8:14:33.07:372,33,0	1/1:3,29:32:78.21:907,78,0	1/1:7,13:20:51.12:578,51,0	1/1:1,15:16:45.12:511,45,0	1/1:7,42:48:96.27:1117,96,0	0/0:13,0:13:30.09:0,30,462	1/1:2,29:31:87.19:977,87,0	1/1:4,21:24:57.14:637,57,0	0/0:15,0:16:45.14:0,45,695
chr10	95408862	.	G	GAA	13418.46	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=15.677;DP=672;FS=0.000;HRun=5;HaplotypeScore=97.5501;InbreedingCoeff=0.9977;MQ=84.60;MQ0=1;MQRankSum=-4.098;QD=43.15;ReadPosRankSum=0.461;VQSLOD=3.5552;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,138,1740	0/0:8,0:8:21.07:0,21,268	0/0:27,0:27:63.05:0,63,743	0/0:28,0:28:61.35:0,61,784	0/0:17,0:17:42.11:0,42,520	1/1:0,20:20:60.21:1049,60,0	1/1:4,28:32:78.27:1363,78,0	0/0:24,0:24:69.21:0,69,866	0/0:30,0:30:87.28:0,87,1109	1/1:6,17:24:54.16:911,54,0	1/1:0,7:7:21.03:335,21,0	1/1:2,30:33:87.30:1517,87,0	1/1:3,16:20:48.01:770,48,0	1/1:2,21:23:54.18:944,54,0	0/0:41,0:41:99:0,111,1401	0/0:37,0:37:99:0,105,1324	0/0:34,0:34:96.30:0,96,1223	0/0:34,0:34:90.28:0,90,1146	1/1:3,13:15:36.12:629,36,0	1/1:0,9:9:24.08:420,24,0	1/1:3,21:24:66.22:1116,66,0	1/1:0,9:9:24.08:420,24,0	1/1:2,9:11:21.07:367,21,0	1/1:4,21:24:57.20:997,57,0	0/0:18,0:18:54.17:0,54,686	1/1:2,24:26:72.22:1230,72,0	1/1:1,29:31:81.19:1351,81,0	0/0:14,0:14:42.13:0,42,534
chr10	95409084	.	C	CAAAT	3873.92	PASS	AB=0.750;AC=43;AF=0.896;AN=48;BaseQRankSum=0.706;DP=334;FS=6.796;HRun=0;HaplotypeScore=64.0442;InbreedingCoeff=0.3384;MQ=60.77;MQ0=1;MQRankSum=-2.994;QD=15.43;ReadPosRankSum=-4.406;VQSLOD=1.2378;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,0:4:6.02:88,6,0	./.	./.	1/1:11,0:12:3.01:52,3,0	1/1:6,8:15:27.09:637,27,0	1/1:6,0:6:3.01:49,3,0	1/1:39,0:38:31.95:239,32,0	1/1:6,0:11:12.04:209,12,0	1/1:11,0:11:4.24:28,4,0	1/1:14,0:16:9.03:156,9,0	1/1:9,3:12:9.03:212,9,0	./.	1/1:6,0:6:3.01:70,3,0	1/1:5,1:8:3.01:52,3,0	1/1:11,0:14:12.04:209,12,0	0/0:14,0:14:21.07:0,21,328	0/0:25,0:25:33.11:0,33,514	1/1:14,7:21:21.07:496,21,0	1/1:7,3:10:9.03:199,9,0	1/1:4,1:5:3.01:71,3,0	1/1:6,0:6:3.01:67,3,0	1/1:4,1:5:3.01:71,3,0	1/1:3,2:5:6.02:142,6,0	1/1:12,0:13:15.05:274,15,0	0/1:4,2:6:37.80:126,0,38	1/1:8,4:12:6.02:142,6,0	1/1:14,0:14:22.54:286,23,0
chr10	95409114	.	AAT	A	1079.06	PASS	AB=0.734;AC=2;AF=0.036;AN=56;BaseQRankSum=3.758;DP=275;FS=0.000;HRun=0;HaplotypeScore=62.1295;InbreedingCoeff=-0.0527;MQ=55.13;MQ0=3;MQRankSum=-7.236;QD=17.40;ReadPosRankSum=-0.562;VQSLOD=3.0275;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:27.05:0,27,386	0/0:3,0:3:9.03:0,9,136	0/0:5,0:1:2.74:0,3,12	0/0:4,0:3:6.02:0,6,75	0/0:10,0:10:30.08:0,30,411	0/0:17,0:17:45.13:0,45,586	0/0:4,0:4:12.04:0,12,181	0/1:20,21:40:99:862,0,519	0/0:10,0:10:27.09:0,27,360	0/0:7,0:7:21.06:0,21,324	0/0:6,0:6:18.05:0,18,223	0/0:5,0:5:15.04:0,15,181	0/0:2,0:1:3.01:0,3,42	0/0:4,0:4:12.03:0,12,148	0/0:6,0:6:12.04:0,12,162	0/0:9,0:9:24.08:0,24,352	0/0:14,0:14:37.94:0,38,627	0/0:18,0:18:54.13:0,54,892	0/0:24,0:23:69.19:0,69,971	0/0:9,0:9:24.08:0,24,333	0/0:4,0:4:12.01:0,12,158	0/0:2,0:2:6.02:0,6,83	0/0:4,0:4:12.04:0,12,164	0/0:2,0:2:6.02:0,6,76	0/0:15,0:15:45.15:0,45,703	0/0:12,0:12:36.11:0,36,501	0/0:8,0:8:18.06:0,18,258	0/1:16,5:21:87.14:305,0,87
chr10	95409116	.	T	TAA	2020.11	PASS	AB=0.991;AC=18;AF=0.321;AN=56;BaseQRankSum=8.844;DP=287;FS=5.726;HRun=3;HaplotypeScore=61.2854;InbreedingCoeff=-0.2427;MQ=56.96;MQ0=3;MQRankSum=-5.762;QD=10.98;ReadPosRankSum=6.134;VQSLOD=0.4766;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:25.15:0,25,287	0/1:3,0:3:5.16:5,0,75	0/0:5,0:1:2.74:0,3,12	0/0:5,0:4:5.05:0,5,48	0/0:10,0:10:15.88:0,16,344	0/1:18,0:18:84.14:84,0,167	0/0:4,0:4:11.40:0,11,134	0/1:37,7:43:99:1240,0,260	0/1:10,0:10:29.65:30,0,183	0/0:6,0:6:18.06:0,18,234	0/1:6,0:6:23.05:23,0,91	0/1:6,0:6:24.15:24,0,74	0/0:2,0:1:3.01:0,3,42	0/1:5,0:5:0.95:1,0,97	0/1:8,0:8:2.16:2,0,113	0/1:8,0:8:18.34:18,0,186	0/0:15,0:15:42.99:0,43,553	0/0:19,0:19:57.12:0,57,752	0/1:26,0:25:32.23:32,0,520	0/1:9,0:9:6.75:7,0,186	0/1:4,0:4:2.05:2,0,93	0/1:3,0:3:1.78:2,0,59	0/1:4,0:4:2.02:2,0,114	0/1:3,0:3:16.22:19,0,16	0/0:15,0:15:13.76:0,14,462	0/0:12,0:12:13.68:0,14,382	0/1:8,0:8:10.08:10,0,150	1/1:5,6:19:45.14:665,45,0
chr10	95409136	.	A	AAGGTTG	5872.07	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=0.834;DP=363;FS=9.705;HRun=0;HaplotypeScore=103.5117;InbreedingCoeff=0.9173;MQ=67.84;MQ0=0;MQRankSum=-10.020;QD=86.35;ReadPosRankSum=-0.991;VQSLOD=6.1117;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,7:15:30.10:989,30,0	0/0:6,0:6:18.06:0,18,426	0/0:8,0:5:15.05:0,15,311	0/0:8,0:8:5.41:0,5,293	0/0:14,0:14:39.13:0,39,916	0/0:18,0:18:51.18:0,51,1198	0/0:11,0:11:30.05:0,30,542	1/1:15,18:35:99:3167,99,0	0/0:10,0:10:27.06:0,27,588	0/0:11,0:11:30.10:0,30,662	0/0:8,0:8:18.06:0,18,409	0/0:6,0:6:18.06:0,18,413	0/0:5,0:5:15.05:0,15,352	0/0:9,0:9:27.08:0,27,590	0/0:13,0:13:33.11:0,33,780	0/0:14,0:14:36.11:0,36,804	0/0:13,0:13:36.12:0,36,844	0/0:23,0:23:63.20:0,63,1437	0/0:29,0:29:87.30:0,87,2020	0/0:14,0:14:42.14:0,42,993	0/0:13,0:13:39.11:0,39,815	0/0:3,0:3:9.03:0,9,186	0/0:6,0:6:18.06:0,18,423	0/0:11,0:11:33.09:0,33,664	0/0:15,0:15:45.15:0,45,1063	0/0:19,0:19:48.16:0,48,1133	0/0:8,0:8:21.07:0,21,497	1/1:4,14:18:51.18:1716,51,0
chr10	95409893	.	GC	G	8254.61	PASS	AB=0.834;AC=54;AF=0.964;AN=56;BaseQRankSum=-3.175;DP=391;FS=29.654;HRun=4;HaplotypeScore=104.8582;InbreedingCoeff=-0.0549;MQ=75.00;MQ0=7;MQRankSum=-1.947;QD=21.11;ReadPosRankSum=4.092;VQSLOD=3.1672;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:39.12:466,39,0	1/1:0,6:6:9.03:108,9,0	0/1:22,8:16:25.30:230,0,25	0/1:31,5:19:99:174,0,165	1/1:0,20:20:36.11:432,36,0	1/1:1,11:12:27.08:324,27,0	1/1:1,9:10:17.10:214,17,0	1/1:1,18:16:42.09:487,42,0	1/1:0,4:4:12.04:144,12,0	1/1:0,15:15:45.14:539,45,0	1/1:1,10:11:8.64:108,9,0	1/1:0,11:11:33.10:395,33,0	1/1:2,4:6:3.97:133,4,0	1/1:2,11:13:33.10:395,33,0	1/1:0,15:15:24.07:287,24,0	1/1:0,16:15:24.07:288,24,0	1/1:1,15:16:39.12:467,39,0	1/1:0,9:9:24.07:287,24,0	1/1:2,14:16:36.10:421,36,0	1/1:1,10:11:21.02:235,21,0	1/1:2,17:19:17.91:216,18,0	1/1:1,9:9:18.05:215,18,0	1/1:0,9:9:20.98:251,21,0	1/1:1,9:10:6.02:72,6,0	1/1:0,15:15:30.09:360,30,0	1/1:0,15:15:42.13:503,42,0	1/1:0,11:11:30.09:360,30,0	1/1:0,5:5:12.04:144,12,0
chr10	95409935	.	CCT	C	1032.95	PASS	AB=0.895;AC=22;AF=0.423;AN=52;BaseQRankSum=2.569;DP=496;FS=20.895;HRun=0;HaplotypeScore=159.9456;InbreedingCoeff=-0.1959;MQ=27.08;MQ0=18;MQRankSum=-0.458;QD=2.98;ReadPosRankSum=0.004;VQSLOD=1.5151;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,1:21:26.29:26,0,113	0/0:10,0:9:5.15:0,5,59	./.	./.	0/0:32,2:32:0.24:0,0,2	1/1:13,4:17:9.73:123,10,0	1/1:8,2:9:0.42:34,0,0	0/1:37,1:34:47.13:47,0,238	1/1:9,0:8:2.98:24,3,0	0/1:32,5:35:99:155,0,138	1/1:15,4:17:0.74:11,1,0	0/1:19,1:20:31.22:67,0,31	0/1:11,1:8:44.13:61,0,44	0/1:8,4:12:21.40:160,0,21	0/0:14,0:13:5.82:0,6,75	0/0:13,1:11:5.25:0,5,25	0/1:29,1:22:20.34:20,0,231	0/0:12,0:11:9.20:0,9,70	0/1:13,4:15:57.66:58,0,60	0/1:29,2:31:2.70:49,0,3	0/0:13,0:9:0.47:0,0,1	1/1:20,2:22:8.06:90,8,0	0/0:14,1:15:1.93:0,2,24	0/0:10,1:9:0.86:0,1,3	0/0:22,1:22:5.99:0,6,60	0/1:26,4:28:99:125,0,156	0/1:10,3:13:24.73:60,0,25	0/1:7,1:6:18.57:62,0,19
chr10	95410033	.	CT	C	476.28	PASS	AB=0.739;AC=11;AF=0.229;AN=48;BaseQRankSum=1.255;DP=208;FS=3.787;HRun=1;HaplotypeScore=58.4553;InbreedingCoeff=0.1179;MQ=36.49;MQ0=12;MQRankSum=-2.863;QD=7.81;ReadPosRankSum=1.750;VQSLOD=1.0247;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:9:11.76:0,12,155	0/0:4,0:4:7.06:0,7,60	0/0:26,0:3:9.03:0,9,127	0/0:28,1:5:5.34:0,5,59	0/0:14,0:13:14.62:0,15,229	0/1:6,2:8:29.22:29,0,81	0/0:4,0:3:1.39:0,1,51	0/0:5,0:4:5.65:0,6,62	./.	0/1:8,5:10:99:115,0,156	0/0:1,0:1:0:0,0,0	0/1:2,5:7:23.14:152,0,23	0/1:3,1:3:4.68:31,0,5	0/1:1,2:3:0:0,0,0	0/0:5,0:4:4.85:0,5,48	0/0:9,0:5:6.02:0,6,86	0/0:5,0:4:4.24:0,4,51	0/0:6,0:6:9.03:0,9,144	0/0:2,0:2:6.01:0,6,74	./.	0/0:4,1:4:0:0,0,0	1/1:5,4:7:1.62:40,2,0	0/1:2,0:2:0:0,0,0	./.	0/0:11,0:11:14.66:0,15,153	0/1:6,6:10:45.74:181,0,46	1/1:2,1:3:4.56:46,5,0	./.
chr10	95410048	.	TTC	T	824.49	PASS	AB=0.952;AC=27;AF=0.500;AN=54;BaseQRankSum=4.230;DP=318;FS=5.806;HRun=0;HaplotypeScore=81.2579;InbreedingCoeff=-0.2085;MQ=37.44;MQ0=20;MQRankSum=-4.782;QD=4.43;ReadPosRankSum=-1.137;VQSLOD=1.9229;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:11,1:11:40.73:41,0,57	0/1:4,0:4:41.05:41,0,57	0/0:37,0:5:11.87:0,12,206	0/0:46,0:8:14.98:0,15,223	0/0:21,0:20:21.48:0,21,337	0/1:10,1:11:14.42:72,0,14	1/1:9,0:8:13.60:106,14,0	0/1:9,0:7:18.49:28,0,18	0/0:7,1:8:3.01:0,3,61	0/1:18,0:13:78.19:130,0,78	1/1:3,1:4:2.22:12,2,0	0/1:8,0:8:13.48:13,0,117	1/1:5,0:4:5.69:47,6,0	0/0:5,0:5:1.76:0,2,5	0/1:6,0:6:37.17:37,0,103	0/0:11,0:7:15.05:0,15,287	0/1:9,1:7:27.19:27,0,189	0/1:10,2:11:25.15:25,0,328	1/1:4,0:4:6.02:86,6,0	0/1:6,0:7:27.05:30,0,27	1/1:7,2:7:2.58:12,3,0	0/1:10,0:8:10.50:11,0,58	0/1:3,2:5:0.04:0,0,0	./.	0/1:14,0:14:40.01:40,0,131	0/1:16,1:14:99:127,0,179	0/1:4,0:4:22.32:22,0,39	1/1:2,2:3:6.01:73,6,0
chr10	95410060	.	C	CCT	2749.64	PASS	AB=0.868;AC=23;AF=0.411;AN=56;BaseQRankSum=-1.645;DP=473;FS=14.007;HRun=0;HaplotypeScore=133.9516;InbreedingCoeff=0.1154;MQ=39.17;MQ0=26;MQRankSum=-3.130;QD=8.96;ReadPosRankSum=-2.262;VQSLOD=2.3971;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,6:14:12.89:212,0,13	0/0:6,0:6:12.45:0,12,98	0/0:48,0:10:5.63:0,6,150	0/1:67,0:10:3.21:3,0,88	0/0:20,0:21:23.28:0,23,296	0/1:11,3:16:25.29:124,0,25	0/1:7,6:13:1.01:278,0,1	1/1:13,5:15:21.27:306,21,0	0/0:10,0:10:8.98:0,9,97	0/1:17,9:27:19.06:570,0,19	1/1:5,2:7:5.59:86,6,0	0/1:5,2:10:2.36:208,0,2	0/1:5,2:6:24.81:59,0,25	1/1:6,1:8:11.90:157,12,0	0/0:14,0:13:6.07:0,6,123	0/0:10,0:8:20.83:0,21,211	0/0:18,0:14:26.53:0,27,349	0/0:12,0:11:16.62:0,17,194	0/1:8,0:7:8.23:71,0,8	1/1:6,3:13:15.14:183,15,0	0/1:12,0:11:4.93:69,0,5	0/1:12,2:13:2.27:97,0,2	0/1:9,1:12:8.62:52,0,9	1/1:8,1:9:2.58:15,3,0	0/0:17,0:17:24.43:0,24,230	0/1:13,6:21:3.69:354,0,4	0/0:4,1:6:3.19:0,3,30	0/1:9,0:8:30.23:75,0,30
chr10	95410064	.	T	TCC	1588.66	PASS	AB=0.994;AC=24;AF=0.429;AN=56;BaseQRankSum=1.255;DP=529;FS=2.285;HRun=1;HaplotypeScore=155.7481;InbreedingCoeff=-0.0818;MQ=40.03;MQ0=28;MQRankSum=-2.283;QD=4.84;ReadPosRankSum=1.792;VQSLOD=-0.2698;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:18:26.93:99,0,27	0/0:8,0:7:8.58:0,9,114	0/1:49,0:14:2.09:2,0,229	0/0:76,0:15:0.41:0,0,161	0/0:22,0:22:26.53:0,27,387	0/1:19,0:17:4.01:107,0,4	0/1:15,0:14:36.49:156,0,36	0/1:22,0:19:99:109,0,129	0/0:11,0:10:9.03:0,9,123	0/1:29,2:27:99:229,0,152	1/1:10,0:8:5.16:50,5,0	1/1:11,0:11:4.90:112,5,0	0/1:9,0:7:31.27:56,0,31	1/1:6,1:8:14.34:124,14,0	0/0:19,0:17:5.72:0,6,176	0/0:11,0:8:15.54:0,16,251	0/0:19,0:15:35.87:0,36,495	0/0:14,0:13:26.92:0,27,323	0/1:12,0:11:9.35:71,0,9	1/1:16,0:16:10.16:69,10,0	0/1:16,0:13:25.58:26,0,33	0/1:18,0:14:22.20:44,0,22	0/1:14,0:14:21.27:81,0,21	1/1:8,2:9:2.68:35,3,0	0/0:19,0:18:16.23:0,16,360	0/1:28,0:24:4.64:265,0,5	0/1:8,0:8:30.96:31,0,35	0/1:11,0:8:61.10:91,0,61
chr10	95410066	.	TCTCC	T	788.05	PASS	AB=0.936;AC=15;AF=0.268;AN=56;BaseQRankSum=6.354;DP=543;FS=22.545;HRun=0;HaplotypeScore=159.5122;InbreedingCoeff=-0.2253;MQ=38.72;MQ0=26;MQRankSum=-4.178;QD=3.61;ReadPosRankSum=1.855;VQSLOD=0.7866;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,1:17:14.76:0,15,329	0/1:7,1:7:43.91:44,0,124	0/0:53,0:17:40.21:0,40,465	0/0:80,0:15:22.67:0,23,368	0/0:22,0:22:26.78:0,27,588	0/1:17,2:18:99:136,0,112	0/0:15,0:14:23:0,23,332	0/0:22,0:20:11.30:0,11,442	0/0:13,0:12:14.75:0,15,205	0/1:30,0:27:99:125,0,718	0/0:10,1:9:9.75:0,10,85	0/1:12,0:12:48.58:49,0,186	0/1:8,0:7:31.66:32,0,71	0/0:6,1:7:0.83:0,1,99	0/1:20,0:18:26.30:26,0,213	0/0:9,1:8:21.68:0,22,357	0/0:20,0:17:44.93:0,45,839	0/0:14,0:13:4.72:0,5,548	0/1:11,2:12:82.05:82,0,186	0/0:19,0:19:15.86:0,16,141	0/1:16,0:13:0.67:1,0,126	0/0:17,0:13:11.38:0,11,126	0/1:14,1:15:57.16:57,0,77	1/1:10,0:9:2.85:15,3,0	0/1:19,1:19:59.67:60,0,320	0/1:25,1:23:99:160,0,338	0/1:8,0:8:16.42:25,0,16	0/1:8,2:8:6.07:127,0,6
chr10	95410100	.	C	CCT	142.29	PASS	AB=0.928;AC=9;AF=0.161;AN=56;BaseQRankSum=4.286;DP=689;FS=0.000;HRun=0;HaplotypeScore=196.6765;InbreedingCoeff=0.0491;MQ=38.00;MQ0=32;MQRankSum=-2.916;QD=0.99;ReadPosRankSum=-4.681;VQSLOD=1.3333;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:5.35:0,5,95	0/0:11,0:9:10.83:0,11,102	0/0:58,0:20:41.55:0,42,475	0/0:101,0:23:35.32:0,35,384	1/1:16,3:19:2.92:35,3,0	0/0:26,0:24:15.25:0,15,241	0/0:21,0:22:8.93:0,9,122	0/0:19,0:16:13.10:0,13,294	0/1:12,5:15:76.63:79,0,77	0/0:41,0:40:67.92:0,68,856	0/0:20,0:18:17.83:0,18,157	0/1:14,0:16:10.30:10,0,113	0/0:10,0:8:13.88:0,14,105	0/1:16,0:16:4.34:4,0,51	0/1:14,2:12:0.02:0,0,0	0/1:12,0:11:27.66:28,0,66	0/0:32,0:31:42.78:0,43,770	0/0:19,0:18:39.01:0,39,458	0/0:18,0:17:17.66:0,18,354	0/0:20,0:20:4.28:0,4,107	0/0:20,0:14:11.22:0,11,113	0/0:21,0:18:1.78:0,2,107	0/0:14,0:14:9.91:0,10,117	0/0:17,0:12:5.09:0,5,22	0/1:35,0:32:99:103,0,221	0/0:38,0:33:21.13:0,21,544	0/1:12,0:12:0.53:1,0,26	0/0:15,0:13:20.65:0,21,234
chr10	95413180	.	T	TCAAAA	23799.46	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-13.096;DP=579;FS=7.464;HRun=0;HaplotypeScore=90.6553;InbreedingCoeff=0.9969;MQ=73.50;MQ0=0;MQRankSum=-6.500;QD=59.06;ReadPosRankSum=0.216;VQSLOD=4.8537;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,28:35:66.23:1873,66,0	0/0:12,0:12:33.11:0,33,647	0/0:12,0:12:27.07:0,27,466	0/0:16,0:16:39.60:0,40,739	0/0:16,0:16:30.10:0,30,588	1/1:7,17:24:48.16:1361,48,0	1/1:7,16:23:54.19:1592,54,0	1/1:23,11:36:45.63:1178,46,0	0/0:10,0:10:21.06:0,21,378	1/1:6,16:22:54.16:1460,54,0	1/1:7,5:12:21.07:468,21,0	1/1:3,18:22:51.18:1499,51,0	1/1:3,16:19:45.15:1331,45,0	1/1:4,8:14:24.08:700,24,0	0/0:22,0:22:51.17:0,51,978	0/0:28,0:28:63.22:0,63,1235	0/0:22,0:22:57.20:0,57,1117	0/0:25,0:25:60.21:0,60,1158	1/1:7,13:21:48.16:1338,48,0	1/1:9,16:25:51.17:1399,51,0	1/1:6,20:26:52.42:1433,52,0	1/1:4,6:10:18.06:532,18,0	1/1:6,12:18:36.12:1064,36,0	1/1:2,25:27:69.24:2044,69,0	0/0:13,0:13:36.12:0,36,706	1/1:8,24:32:78.25:2137,78,0	1/1:7,10:18:30.10:881,30,0	1/1:0,19:19:51.18:1509,51,0
chr10	95413728	.	CA	C	1656.24	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=7.310;DP=451;FS=1.139;HRun=2;HaplotypeScore=44.5854;InbreedingCoeff=0.9149;MQ=80.52;MQ0=0;MQRankSum=0.136;QD=29.06;ReadPosRankSum=0.255;VQSLOD=3.1035;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.13:0,57,749	1/1:0,2:2:6.02:77,6,0	0/0:15,0:16:18.17:0,18,419	0/0:10,0:9:17.22:0,17,259	1/1:0,5:5:14.96:156,15,0	0/0:12,0:12:30.10:0,30,436	0/0:34,0:34:99:0,102,1401	1/1:0,13:13:39.07:455,39,0	1/1:0,10:10:24.08:310,24,0	0/0:21,0:21:54.16:0,54,767	0/0:4,0:4:12.04:0,12,170	0/0:20,0:20:48.14:0,48,674	0/0:14,0:14:39.12:0,39,541	0/0:31,0:31:93.28:0,93,1333	1/1:0,9:9:24.08:311,24,0	1/1:0,12:12:27.09:348,27,0	0/0:32,0:32:93.17:0,93,1257	0/0:22,0:22:66.21:0,66,938	0/0:14,0:14:42.13:0,42,585	0/0:7,0:7:21.06:0,21,287	0/0:66,0:66:99:0,193,2648	0/0:2,0:2:6.02:0,6,87	0/0:11,0:11:25.64:0,26,354	0/0:38,0:38:99:0,114,1578	1/1:0,3:3:9.03:116,9,0	0/0:18,0:18:54.17:0,54,755	0/0:3,0:3:9.02:0,9,112	1/1:1,2:3:6.02:78,6,0
chr10	95413788	.	A	AC	544.62	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.297;DP=500;FS=0.000;HRun=6;HaplotypeScore=52.0352;InbreedingCoeff=0.9431;MQ=79.50;MQ0=0;MQRankSum=0.400;QD=24.76;ReadPosRankSum=-3.537;VQSLOD=1.8120;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:60.10:0,60,603	0/0:4,0:4:12.03:0,12,122	0/0:11,0:11:27.05:0,27,273	0/0:16,0:16:30.93:0,31,305	0/0:12,0:12:30.02:0,30,294	0/0:9,0:9:20.47:0,20,213	0/0:33,0:33:81.18:0,81,826	1/1:2,14:16:42.09:501,42,0	0/0:6,0:6:15.03:0,15,153	0/0:13,0:13:39.09:0,39,398	0/0:8,0:8:21.04:0,21,214	0/0:20,0:20:51.11:0,51,520	0/0:9,0:9:24.05:0,24,245	0/0:29,0:29:75.16:0,75,762	0/0:14,0:14:42.10:0,42,428	0/0:12,0:12:21.04:0,21,214	0/0:27,0:27:72.16:0,72,734	0/0:32,0:32:93.21:0,93,949	0/0:21,0:21:45.09:0,45,454	0/0:5,0:5:12.02:0,12,118	0/0:65,0:65:99:0,177,1804	0/0:15,0:15:39.08:0,39,397	0/0:9,0:9:27.06:0,27,274	0/0:43,0:43:99:0,126,1274	0/0:12,0:12:33.07:0,33,337	0/0:18,0:18:48.11:0,48,487	0/0:9,0:9:27.06:0,27,275	1/1:1,5:6:14.63:161,15,0
chr10	95414293	.	C	CA	3886.91	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.754;DP=688;FS=2.224;HRun=7;HaplotypeScore=78.0606;InbreedingCoeff=0.9976;MQ=73.35;MQ0=0;MQRankSum=-1.918;QD=28.58;ReadPosRankSum=2.051;VQSLOD=4.3163;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,1006	1/1:0,9:9:18.06:217,18,0	0/0:21,0:20:24.43:0,24,404	0/0:28,0:27:29.11:0,29,432	1/1:3,24:27:72.17:844,72,0	0/0:21,0:21:60.08:0,60,574	0/0:32,0:32:87.09:0,87,822	0/0:31,0:31:69.09:0,69,661	1/1:4,23:27:60.18:725,60,0	0/0:32,0:32:84.13:0,84,811	0/0:18,0:18:48.05:0,48,456	0/0:26,0:26:69.11:0,69,666	0/0:24,0:24:69.11:0,69,666	0/0:26,0:26:51.06:0,51,493	1/1:2,25:27:63.19:761,63,0	1/1:2,31:33:74.80:905,75,0	0/0:33,0:33:90.12:0,90,863	0/0:27,0:27:75.12:0,75,723	0/0:26,0:26:66.10:0,66,637	0/0:16,0:16:45.07:0,45,434	0/0:29,0:29:78.12:0,78,753	0/0:11,0:11:27.04:0,27,261	0/0:23,0:23:60.10:0,60,579	0/0:23,0:23:57.08:0,57,550	1/1:0,12:13:36.11:435,36,0	0/0:29,0:29:69.10:0,69,666	0/0:21,0:20:57.09:0,57,550	0/0:16,0:16:48.08:0,48,463
chr10	95414604	.	T	TTCTC	5674.34	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.187;DP=738;FS=19.348;HRun=0;HaplotypeScore=133.7819;InbreedingCoeff=0.9965;MQ=80.54;MQ0=0;MQRankSum=-2.978;QD=54.56;ReadPosRankSum=0.164;VQSLOD=4.7660;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,2251	1/1:1,5:8:18.06:464,18,0	0/0:21,0:21:54.16:0,54,984	0/0:19,0:19:57.20:0,57,1076	1/1:15,8:27:27.09:691,27,0	0/0:27,0:27:78.22:0,78,1376	0/0:35,0:35:99:0,99,1817	0/0:29,0:29:74.98:0,75,1424	1/1:2,12:14:36.12:977,36,0	0/0:24,0:24:66.22:0,66,1239	0/0:20,0:20:51.16:0,51,955	0/0:36,0:36:99:0,102,1879	0/0:34,0:34:93.30:0,93,1738	0/0:22,0:22:60.21:0,60,1152	1/1:4,16:21:54.19:1446,54,0	1/1:5,17:23:63.22:1605,63,0	0/0:36,0:36:93.32:0,93,1771	0/0:35,0:35:99:0,102,1938	0/0:26,0:26:75.16:0,75,1259	0/0:27,0:27:54.16:0,54,960	0/0:67,0:67:99:0,181,3482	0/0:24,0:24:72.24:0,72,1361	0/0:18,0:18:51.16:0,51,953	0/0:29,0:29:81.28:0,81,1559	1/1:2,8:11:18.06:492,18,0	0/0:29,0:29:81.23:0,81,1485	0/0:22,0:22:66.23:0,66,1270	0/0:13,0:13:39.13:0,39,756
chr10	95414937	.	AGATG	A	579.82	PASS	AB=1.000;AC=11;AF=0.212;AN=52;BaseQRankSum=1.825;DP=695;FS=24.824;HRun=0;HaplotypeScore=164.3941;InbreedingCoeff=0.5690;MQ=59.33;MQ0=9;MQRankSum=-0.052;QD=4.20;ReadPosRankSum=-0.524;VQSLOD=0.5703;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:38.49:0,38,406	1/1:12,0:12:17.85:150,18,0	0/0:21,0:16:14.04:0,14,154	0/0:18,0:14:27.05:0,27,290	1/1:16,2:17:9.36:92,9,0	0/0:22,0:22:51.68:0,52,408	0/0:16,0:16:41.73:0,42,355	0/0:42,0:39:92.88:0,93,818	1/1:2,22:24:0.47:1,0,0	0/0:28,0:28:48.17:0,48,525	0/0:25,0:25:20.84:0,21,173	0/0:29,0:27:39.32:0,39,318	0/0:24,0:23:41.75:0,42,331	0/0:25,0:25:46.66:0,47,394	1/1:40,0:40:53.61:452,54,0	./.	0/1:24,0:24:17.94:18,0,189	0/0:20,0:20:20.73:0,21,257	0/0:21,0:18:29.54:0,30,224	0/0:34,0:34:68.71:0,69,552	0/0:23,0:22:37.25:0,37,295	0/0:32,0:30:28.33:0,28,371	0/0:18,0:18:34.72:0,35,270	0/1:14,0:13:7.55:8,0,60	./.	0/0:32,0:32:0.49:0,0,389	0/0:36,0:34:55.32:0,55,538	0/1:6,0:5:2.82:3,0,37
chr10	95414945	.	GGATAGATAGATA	G	4758.49	PASS	AB=1.000;AC=37;AF=0.841;AN=44;BaseQRankSum=2.391;DP=671;FS=7.791;HRun=0;HaplotypeScore=214.9670;InbreedingCoeff=0.5478;MQ=50.65;MQ0=9;MQRankSum=0.157;QD=10.00;ReadPosRankSum=0.864;VQSLOD=2.9687;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:26.65:46,0,27	1/1:11,0:11:0.48:2,0,0	./.	./.	0/0:18,0:17:3.01:0,3,42	1/1:25,0:25:12.02:194,12,0	1/1:20,0:19:6:73,6,0	./.	1/1:22,0:22:0.47:1,0,0	1/1:30,0:30:30.57:557,31,0	./.	1/1:31,0:29:21.02:310,21,0	1/1:26,0:26:20.68:379,21,0	1/1:26,0:26:8.93:190,9,0	1/1:37,0:37:2.30:6,2,0	./.	0/0:19,0:19:24.02:0,24,322	0/0:17,0:17:21:0,21,204	1/1:11,0:17:21.49:359,21,0	1/1:17,16:33:3.90:45,4,0	1/1:18,0:17:6.02:109,6,0	1/1:34,0:32:12.03:223,12,0	1/1:18,0:18:12.04:270,12,0	1/1:13,0:12:9.03:187,9,0	./.	1/1:38,0:38:69.13:1357,69,0	1/1:37,0:35:17.95:359,18,0	1/1:7,0:6:8.90:94,9,0
chr10	95415031	.	ATAGG	A	4846.60	PASS	AB=0.863;AC=21;AF=0.375;AN=56;BaseQRankSum=-2.989;DP=913;FS=6.329;HRun=0;HaplotypeScore=258.8936;InbreedingCoeff=0.1131;MQ=40.70;MQ0=6;MQRankSum=3.349;QD=8.75;ReadPosRankSum=-0.548;VQSLOD=2.9964;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:39:8.92:9,0,174	0/1:8,0:8:0.27:0,0,1	0/0:15,0:9:27.09:0,27,614	0/0:8,0:4:12.04:0,12,265	0/0:32,0:32:34.20:0,34,507	1/1:24,0:22:14.32:169,14,0	0/1:24,0:21:66.71:115,0,67	1/1:13,33:45:65.14:1187,65,0	0/0:37,0:37:34.81:0,35,590	0/1:27,31:57:99:856,0,941	1/1:23,0:21:15.05:254,15,0	0/1:34,0:32:99:284,0,100	0/1:33,1:31:52.32:261,0,52	1/1:14,18:31:2.57:34,3,0	0/0:40,0:40:19.69:0,20,619	0/0:34,0:34:37.98:0,38,580	0/0:33,0:33:84.29:0,84,2139	0/0:22,0:19:54.16:0,54,1405	0/1:33,0:29:99:355,0,515	0/1:36,0:34:10.65:281,0,11	0/0:11,22:32:0:0,0,1	1/1:16,16:31:2.68:35,3,0	0/0:15,20:35:0.47:0,0,1	0/0:12,12:21:0:0,0,0	0/0:46,0:46:33.26:0,33,529	0/1:25,27:52:99:830,0,972	0/1:25,25:48:27.52:28,0,246	0/1:4,23:27:50.13:147,0,50
chr10	95415130	.	G	GACTGACTC	9318.96	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=2.363;DP=792;FS=23.491;HRun=0;HaplotypeScore=198.1136;InbreedingCoeff=0.9996;MQ=69.93;MQ0=0;MQRankSum=-12.030;QD=55.80;ReadPosRankSum=-2.544;VQSLOD=2.4721;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:87.28:0,87,2192	1/1:3,14:19:36.12:1422,36,0	0/0:23,0:23:40.90:0,41,726	0/0:22,0:22:32.93:0,33,678	1/1:5,14:21:27.09:1122,27,0	0/0:26,0:26:57.10:0,57,1254	0/0:17,0:17:45.13:0,45,1070	0/0:42,0:42:81.11:0,81,1500	1/1:9,20:32:42.14:1735,42,0	0/0:30,0:30:66.21:0,66,1539	0/0:18,0:18:48.14:0,48,1093	0/0:42,0:41:87.28:0,87,2230	0/0:39,0:39:90.28:0,90,2079	0/0:25,0:25:63.19:0,63,1518	1/1:12,16:30:36.12:1450,36,0	1/1:24,11:35:54.16:1821,54,0	0/0:21,0:21:51.17:0,51,1250	0/0:34,0:34:87.20:0,87,2038	0/0:22,0:22:48.13:0,48,1114	0/0:28,0:28:60.16:0,60,1350	0/0:25,0:25:57.16:0,57,1359	0/0:32,0:32:84.26:0,84,2031	0/0:20,0:20:51.18:0,51,1306	0/0:22,0:21:38.85:0,39,944	1/1:9,21:30:42.14:1769,42,0	0/0:43,0:43:99:0,102,2361	0/0:28,0:27:66.21:0,66,1640	0/0:31,0:31:69.22:0,69,1754
chr10	95416721	.	C	CG	19962.93	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-10.666;DP=655;FS=2.064;HRun=4;HaplotypeScore=62.3541;InbreedingCoeff=0.9991;MQ=80.37;MQ0=0;MQRankSum=-5.684;QD=34.96;ReadPosRankSum=1.803;VQSLOD=5.5239;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:66.22:901,66,0	1/1:0,10:10:23.87:328,24,0	0/0:13,0:13:32.21:0,32,312	0/0:18,0:18:37.20:0,37,356	1/1:1,17:18:48.16:650,48,0	1/1:2,22:24:57.19:777,57,0	1/1:1,29:30:78.26:1066,78,0	1/1:2,23:25:66.17:851,66,0	1/1:1,24:25:69.23:941,69,0	1/1:4,29:33:87.22:1131,87,0	1/1:1,28:29:66.22:895,66,0	1/1:1,34:35:99:1352,99,0	1/1:0,18:18:48.16:656,48,0	1/1:3,22:25:63.21:861,63,0	1/1:1,20:21:57.19:779,57,0	1/1:2,21:23:57.19:779,57,0	0/0:29,0:29:87.23:0,87,976	0/0:24,0:24:72.14:0,72,790	1/1:3,18:21:54.17:718,54,0	1/1:1,32:33:90.25:1202,90,0	1/1:2,28:30:63.21:860,63,0	1/1:1,26:27:78.26:1055,78,0	1/1:0,19:19:54.18:738,54,0	1/1:0,18:18:45.15:614,45,0	1/1:1,15:16:36.12:492,36,0	1/1:2,25:27:75.24:1006,75,0	1/1:4,22:26:66.22:900,66,0	1/1:0,11:11:30.10:410,30,0
chr10	95417825	.	A	AG	23074.51	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-10.927;DP=651;FS=0.932;HRun=1;HaplotypeScore=54.9139;InbreedingCoeff=0.9983;MQ=80.86;MQ0=0;MQRankSum=-4.910;QD=40.48;ReadPosRankSum=2.671;VQSLOD=5.3698;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,31:35:90.30:1347,90,0	1/1:0,8:8:24.01:332,24,0	0/0:17,0:17:45.14:0,45,564	0/0:15,0:15:42.08:0,42,513	1/1:1,15:16:42.14:627,42,0	1/1:1,24:25:66.22:983,66,0	1/1:1,21:22:57.19:854,57,0	1/1:1,35:36:99:1490,105,0	1/1:1,22:23:63.21:943,63,0	1/1:0,25:25:75.24:1103,75,0	1/1:1,17:18:48.16:718,48,0	1/1:2,24:27:66.22:981,66,0	1/1:1,26:28:78.25:1147,78,0	1/1:1,33:34:81.27:1210,81,0	1/1:0,32:32:90.30:1348,90,0	1/1:0,26:26:75.25:1124,75,0	0/0:30,0:30:87.23:0,87,1094	0/0:19,0:19:57.12:0,57,704	1/1:1,27:28:81.24:1152,81,0	1/1:0,18:18:54.18:805,54,0	1/1:0,22:22:63.21:943,63,0	1/1:0,20:20:57.12:825,57,0	1/1:0,20:20:51.17:763,51,0	1/1:2,26:28:75.25:1123,75,0	1/1:0,22:22:60.20:899,60,0	1/1:1,22:23:63.20:921,63,0	1/1:1,26:27:75.25:1123,75,0	1/1:0,7:7:21.07:314,21,0
chr10	95418283	.	AGCCTCTTTGGG	A	24129.43	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=17.235;DP=594;FS=1.017;HRun=0;HaplotypeScore=239.7426;InbreedingCoeff=0.9956;MQ=79.24;MQ0=0;MQRankSum=-19.151;QD=88.39;ReadPosRankSum=3.058;VQSLOD=4.8911;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,154,8579	0/0:16,0:16:48.16:0,48,2282	0/0:22,0:22:63.15:0,63,3042	0/0:18,0:18:54.19:0,54,2428	0/0:18,0:18:54.17:0,54,2363	1/1:3,11:14:39.10:1245,39,0	1/1:1,16:17:48.16:1739,48,0	0/0:27,0:27:81.28:0,81,3554	0/0:27,0:27:81.28:0,81,3751	1/1:4,17:21:57.20:2005,57,0	1/1:1,14:15:39.13:1413,39,0	1/1:1,24:25:69.24:2500,69,0	1/1:3,14:17:45.15:1629,45,0	1/1:3,15:18:48.15:1621,48,0	0/0:19,0:19:57.20:0,57,2739	0/0:31,0:31:93.26:0,93,3926	0/0:38,0:38:99:0,111,6047	0/0:16,0:16:48.16:0,48,2576	1/1:2,14:16:42.14:1523,42,0	1/1:1,16:17:48.16:1740,48,0	1/1:7,6:13:15.05:544,15,0	1/1:4,20:24:54.19:1866,54,0	1/1:2,20:22:48.16:1739,48,0	1/1:5,6:11:15.05:543,15,0	0/0:25,0:25:69.22:0,69,3079	1/1:3,19:22:57.20:2067,57,0	1/1:3,18:21:54.19:1955,54,0	0/0:13,0:13:36.12:0,36,1594
chr10	95418346	.	TCTA	T	12559.80	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=12.608;DP=597;FS=0.000;HRun=0;HaplotypeScore=142.5660;InbreedingCoeff=0.9919;MQ=84.19;MQ0=0;MQRankSum=-12.838;QD=41.32;ReadPosRankSum=1.911;VQSLOD=6.0969;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,129,2911	0/0:3,0:3:9.03:0,9,188	0/0:25,0:25:75.22:0,75,1537	0/0:20,0:20:57.17:0,57,1087	0/0:18,0:18:51.17:0,51,1113	1/1:1,13:14:36.12:601,36,0	1/1:1,17:18:48.08:742,48,0	0/0:30,0:30:87.30:0,87,1921	0/0:25,0:25:75.23:0,75,1608	1/1:2,25:27:72.25:1224,72,0	1/1:1,16:17:42.07:653,42,0	1/1:5,22:27:63.21:1047,63,0	1/1:2,16:18:42.02:684,42,0	1/1:3,17:20:51.17:857,51,0	0/0:24,0:24:72.25:0,72,1641	0/0:17,0:17:51.16:0,51,1107	0/0:33,0:33:99:0,99,2241	0/0:22,0:22:57.17:0,57,1256	1/1:1,22:23:66.23:1122,66,0	1/1:4,10:14:36.04:511,36,0	1/1:0,18:18:32.94:414,33,0	1/1:1,20:21:60.16:991,60,0	1/1:0,23:23:63.17:979,63,0	1/1:0,21:21:54.57:875,55,0	0/0:18,0:18:54.19:0,54,1219	1/1:3,19:22:51.17:869,51,0	1/1:1,20:21:60.15:990,60,0	0/0:12,0:12:36.12:0,36,794
chr10	95418839	.	T	TAAA	8538.15	PASS	AB=0.644;AC=45;AF=0.804;AN=56;BaseQRankSum=1.032;DP=557;FS=12.556;HRun=12;HaplotypeScore=103.4695;InbreedingCoeff=0.8701;MQ=68.35;MQ0=1;MQRankSum=-6.976;QD=19.40;ReadPosRankSum=-3.085;VQSLOD=1.5780;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:33:27.75:0,28,308	1/1:11,0:11:24.05:356,24,0	0/0:13,0:12:14.86:0,15,151	0/0:16,0:16:15.50:0,16,180	1/1:9,10:22:42.88:545,43,0	1/1:3,12:19:30.10:511,30,0	1/1:6,15:26:43.36:662,43,0	0/1:13,0:29:8.53:9,0,40	1/1:5,13:22:28.63:454,29,0	1/1:7,10:17:28.59:367,29,0	1/1:5,2:13:26.35:264,26,0	1/1:5,12:21:24.08:389,24,0	1/1:9,10:23:24.08:377,24,0	1/1:5,15:23:24.08:381,24,0	1/1:2,14:20:33.08:512,33,0	1/1:5,13:20:27.92:481,28,0	0/0:27,0:29:72.02:0,72,781	0/0:25,0:25:41.83:0,42,470	1/1:4,7:13:30.07:471,30,0	1/1:3,12:17:39.06:510,39,0	1/1:8,11:24:15.03:227,15,0	1/1:6,5:12:11.92:117,12,0	1/1:7,7:16:15.03:242,15,0	1/1:8,12:21:22:376,22,0	1/1:4,10:15:21.07:360,21,0	1/1:9,8:22:38.55:522,39,0	1/1:8,11:19:24.04:381,24,0	1/1:1,0:13:11.21:25,11,0
chr10	95419436	.	ATACT	A	2413.28	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.267;DP=691;FS=28.833;HRun=0;HaplotypeScore=119.1421;InbreedingCoeff=0.9979;MQ=82.91;MQ0=0;MQRankSum=-4.205;QD=49.25;ReadPosRankSum=1.143;VQSLOD=2.2879;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,48:49:99:2508,132,0	0/0:8,0:8:24.08:0,24,657	0/0:24,0:24:72.25:0,72,1875	0/0:14,0:14:39.07:0,39,976	0/0:19,0:19:57.18:0,57,1503	0/0:21,0:21:60.21:0,60,1631	0/0:35,0:35:96.33:0,96,2619	0/0:23,0:23:69.20:0,69,1763	0/0:15,0:15:45.15:0,45,1204	0/0:32,0:32:96.33:0,96,2590	0/0:24,0:24:69.22:0,69,1818	0/0:28,0:28:81.28:0,81,2206	0/0:19,0:19:54.19:0,54,1468	0/0:24,0:24:63.07:0,63,1654	0/0:28,0:28:75.26:0,75,2001	0/0:17,0:17:51.18:0,51,1397	0/0:42,0:42:99:0,126,3430	0/0:25,0:24:75.26:0,75,2022	0/0:22,0:22:66.19:0,66,1582	0/0:22,0:22:66.23:0,66,1784	0/0:38,0:38:99:0,99,2660	0/0:19,0:19:54.19:0,54,1456	0/0:21,0:21:60.16:0,60,1571	0/0:27,0:27:81.28:0,81,2216	0/0:35,0:35:99:0,102,2764	0/0:20,0:20:60.19:0,60,1557	0/0:23,0:23:54.16:0,54,1419	0/0:17,0:17:51.18:0,51,1381
chr10	95419503	.	C	CG	13719.36	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-11.659;DP=638;FS=20.920;HRun=6;HaplotypeScore=70.6959;InbreedingCoeff=0.9931;MQ=84.69;MQ0=0;MQRankSum=-2.965;QD=27.94;ReadPosRankSum=1.297;VQSLOD=3.1730;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,101,1000	1/1:0,7:7:18.06:226,18,0	0/0:23,0:23:63.11:0,63,634	0/0:19,0:19:39.06:0,39,387	1/1:4,14:18:27.09:339,27,0	1/1:3,11:14:24.08:302,24,0	1/1:3,32:35:90.26:1111,90,0	1/1:3,22:25:63.15:761,63,0	1/1:1,20:21:60.19:755,60,0	1/1:5,10:15:30.10:376,30,0	1/1:5,15:20:33.10:406,33,0	1/1:2,27:29:75.04:943,75,0	1/1:3,17:20:42.13:528,42,0	1/1:2,26:28:63.07:792,63,0	1/1:2,19:21:48.15:604,48,0	1/1:4,23:27:66.21:830,66,0	0/0:33,0:33:81.17:0,81,824	0/0:26,0:26:72.12:0,72,721	1/1:5,18:23:54.15:653,54,0	1/1:4,15:19:39.04:454,39,0	1/1:3,32:35:75.24:944,75,0	1/1:4,13:17:30.10:377,30,0	1/1:5,11:16:27.09:339,27,0	1/1:1,23:24:69.22:868,69,0	1/1:8,10:18:36.10:430,36,0	1/1:4,18:22:54.15:665,54,0	1/1:1,27:27:66.04:829,66,0	1/1:4,5:9:15.05:189,15,0
chr10	95420765	.	GAC	G	2413.18	PASS	AB=0.778;AC=38;AF=0.731;AN=52;BaseQRankSum=5.259;DP=717;FS=1.192;HRun=0;HaplotypeScore=125.0756;InbreedingCoeff=0.1828;MQ=56.98;MQ0=6;MQRankSum=-0.053;QD=4.15;ReadPosRankSum=2.441;VQSLOD=2.6039;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:49:29.98:0,30,267	1/1:2,0:5:2.74:12,3,0	./.	./.	1/1:4,0:14:2.84:14,3,0	0/1:13,9:24:8.95:173,0,9	1/1:19,10:29:18.05:194,18,0	0/0:25,0:22:5.96:0,6,45	1/1:14,0:31:14.72:110,15,0	0/1:14,1:15:13.56:23,0,14	1/1:7,0:16:8.48:42,8,0	0/1:18,13:34:12.27:238,0,12	1/1:14,11:28:15.76:214,16,0	0/1:13,14:28:8.51:187,0,9	1/1:9,0:33:28.26:138,28,0	1/1:9,0:21:11.23:56,11,0	0/1:33,0:33:38.98:39,0,442	0/1:33,1:34:2.34:2,0,676	1/1:11,1:14:5.85:46,6,0	1/1:6,0:15:11.36:56,11,0	1/1:43,0:63:22.73:112,23,0	0/1:8,7:17:61.74:76,0,62	1/1:8,9:18:11.87:112,12,0	0/1:15,17:32:3.64:412,0,4	1/1:9,0:31:19.89:98,20,0	1/1:15,0:24:10.72:120,11,0	1/1:9,0:21:8.65:96,9,0	0/0:7,0:8:11.27:0,11,80
chr10	95422755	.	A	AT	787.02	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.729;DP=618;FS=0.684;HRun=9;HaplotypeScore=67.6493;InbreedingCoeff=0.9628;MQ=72.55;MQ0=0;MQRankSum=-1.523;QD=18.30;ReadPosRankSum=-3.462;VQSLOD=2.7870;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,102,880	0/0:10,0:10:26.99:0,27,234	0/0:20,0:18:29.97:0,30,258	0/0:14,0:14:10.57:0,11,142	0/0:26,0:26:71.97:0,72,621	0/0:23,0:22:59.98:0,60,521	0/0:27,0:27:38.81:0,39,549	1/1:15,17:29:48.89:708,49,0	0/0:28,0:28:68.98:0,69,599	0/0:13,0:13:20.07:0,20,271	0/0:18,0:18:41.43:0,41,359	0/0:19,0:19:44.97:0,45,390	0/0:7,0:7:17.72:0,18,138	0/0:19,0:19:50.95:0,51,435	0/0:53,1:54:99:0,117,1228	0/0:26,0:26:68.92:0,69,590	0/0:30,0:30:83.98:0,84,729	0/0:24,0:24:65.97:0,66,573	0/0:15,0:15:41.99:0,42,365	0/0:22,0:22:56.90:0,57,486	0/0:27,0:27:68.97:0,69,598	0/0:8,0:8:17.98:0,18,156	0/0:15,0:15:38.99:0,39,338	0/0:30,0:29:80.93:0,81,695	0/0:14,0:14:38.99:0,39,339	0/0:22,0:22:58.62:0,59,516	0/0:24,0:23:65.88:0,66,560	1/1:0,11:11:18.05:199,18,0
chr10	95423904	.	T	TA	572.62	PASS	AB=0.901;AC=13;AF=0.232;AN=56;BaseQRankSum=-0.802;DP=524;FS=0.552;HRun=13;HaplotypeScore=68.7549;InbreedingCoeff=0.2687;MQ=67.17;MQ0=1;MQRankSum=-3.756;QD=3.27;ReadPosRankSum=-1.571;VQSLOD=-0.2455;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:22.73:112,23,0	0/0:7,0:7:8.89:0,9,61	0/0:10,0:6:0.71:0,1,17	0/1:18,1:12:16.13:16,0,32	0/0:24,1:25:15.65:0,16,240	0/1:19,3:22:8.14:8,0,237	0/0:17,0:20:53.59:0,54,339	1/1:8,8:16:10.21:204,10,0	0/0:15,0:15:32.71:0,33,226	0/1:26,2:28:5.22:5,0,256	0/0:19,0:20:43.67:0,44,294	0/0:22,0:22:50.52:0,51,349	0/0:11,1:12:4.84:0,5,174	0/0:13,0:16:27.86:0,28,176	0/1:11,1:14:7.70:8,0,155	0/0:30,3:33:18.60:0,19,415	0/0:20,0:20:49.87:0,50,330	0/1:18,3:21:32.95:33,0,234	0/0:22,1:24:9.72:0,10,199	0/0:17,1:18:16.73:0,17,257	0/1:9,1:10:7.05:7,0,98	0/1:13,2:15:2.09:2,0,124	0/0:20,1:24:31.74:0,32,279	0/0:16,1:19:18.77:0,19,266	0/0:18,0:19:37.61:0,38,250	0/0:16,0:16:26.59:0,27,183	0/0:23,2:29:2.04:0,2,272	1/1:1,13:14:36.04:334,36,0
chr10	95423914	.	A	AAAAAAG	677.28	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=3.077;DP=555;FS=5.392;HRun=0;HaplotypeScore=117.7063;InbreedingCoeff=0.4631;MQ=63.16;MQ0=1;MQRankSum=-2.023;QD=9.96;ReadPosRankSum=-1.553;VQSLOD=1.9025;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:28:24.07:767,24,0	0/0:4,0:4:12.02:0,12,157	0/0:10,0:5:6.34:0,6,92	0/1:19,0:11:4.49:4,0,151	0/0:24,0:24:63.12:0,63,923	0/0:23,0:23:47.89:0,48,861	0/0:22,0:22:62.67:0,63,961	0/1:21,0:21:11.47:11,0,296	0/0:16,0:16:48.11:0,48,753	0/0:29,0:29:62.88:0,63,1016	0/0:20,0:20:54.11:0,54,845	0/0:24,0:24:66.04:0,66,962	0/0:15,0:15:44.90:0,45,612	0/0:14,0:14:36.06:0,36,499	0/0:15,0:15:43.79:0,44,558	0/0:34,0:34:93.53:0,94,1433	0/0:21,0:21:60.14:0,60,892	0/0:21,0:21:63.03:0,63,953	0/0:21,0:21:53.63:0,54,791	0/0:19,0:19:54.05:0,54,749	0/0:7,0:7:12.03:0,12,322	0/0:19,0:19:38.27:0,38,530	0/0:20,0:20:53.64:0,54,848	0/0:21,0:21:57.05:0,57,895	0/0:22,0:22:57.04:0,57,822	0/0:18,0:18:54.01:0,54,708	0/0:32,0:32:57.69:0,58,1117	0/0:16,0:16:41.57:0,42,322
chr10	95424696	.	AG	A	1750.86	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.969;DP=684;FS=0.572;HRun=1;HaplotypeScore=61.4733;InbreedingCoeff=0.9977;MQ=95.73;MQ0=0;MQRankSum=-5.213;QD=31.83;ReadPosRankSum=1.043;VQSLOD=3.2826;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,55:55:99:1846,132,0	0/0:10,0:10:30.10:0,30,478	0/0:34,0:34:99:0,99,1547	0/0:29,0:29:84.29:0,84,1335	0/0:29,0:29:87.30:0,87,1388	0/0:19,0:19:54.18:0,54,857	0/0:21,0:21:63.19:0,63,979	0/0:23,0:23:69.24:0,69,1097	0/0:17,0:17:51.16:0,51,788	0/0:19,0:19:57.19:0,57,909	0/0:15,0:15:45.15:0,45,716	0/0:35,0:35:99:0,105,1649	0/0:24,0:24:72.25:0,72,1151	0/0:20,0:20:60.20:0,60,959	0/0:24,0:24:72.25:0,72,1151	0/0:25,0:25:75.26:0,75,1199	0/0:32,0:32:96.33:0,96,1524	0/0:29,0:29:87.28:0,87,1366	0/0:23,0:23:69.22:0,69,1048	0/0:11,0:11:33.11:0,33,528	0/0:62,0:62:99:0,184,2849	0/0:9,0:9:27.09:0,27,431	0/0:16,0:16:45.15:0,45,719	0/0:28,0:28:84.27:0,84,1319	0/0:16,0:16:45.13:0,45,688	0/0:27,0:27:81.27:0,81,1272	0/0:22,0:22:66.21:0,66,1030	0/0:10,0:10:30.10:0,30,480
chr10	95426323	.	TG	T	517.32	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.606;DP=623;FS=3.000;HRun=7;HaplotypeScore=58.9234;InbreedingCoeff=0.9450;MQ=86.80;MQ0=1;MQRankSum=-1.875;QD=22.49;ReadPosRankSum=1.110;VQSLOD=3.5844;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:60.14:612,60,0	0/0:3,0:3:9.02:0,9,99	0/0:17,0:17:42.09:0,42,510	0/0:28,0:28:44.39:0,44,732	0/0:21,0:21:57.16:0,57,691	0/0:29,0:29:81.26:0,81,1017	0/0:22,0:22:60.19:0,60,753	0/0:29,0:29:69.22:0,69,868	0/0:15,0:15:42.13:0,42,528	0/0:22,0:22:57.17:0,57,705	0/0:17,0:17:48.14:0,48,589	0/0:30,0:30:81.26:0,81,1018	0/0:26,1:27:44.60:0,45,848	0/0:15,0:15:45.12:0,45,541	0/0:25,0:25:75.22:0,75,913	0/0:32,0:32:90.27:0,90,1109	0/0:33,0:33:90.25:0,90,1102	0/0:17,0:17:51.16:0,51,642	0/0:19,0:19:51.13:0,51,625	0/0:19,0:19:54.16:0,54,664	0/0:24,0:24:63.20:0,63,793	0/0:24,0:24:69.21:0,69,854	0/0:21,0:21:57.18:0,57,716	0/0:24,0:23:60.15:0,60,736	0/0:17,0:17:42.13:0,42,528	0/0:27,0:27:72.22:0,72,894	0/0:24,0:24:72.23:0,72,906	0/0:19,0:19:45.13:0,45,553
chr10	95426666	.	T	TC	3830.01	PASS	AB=1.000;AC=31;AF=0.574;AN=54;BaseQRankSum=-6.572;DP=281;FS=2.586;HRun=7;HaplotypeScore=35.7670;InbreedingCoeff=0.8677;MQ=93.41;MQ0=0;MQRankSum=-1.028;QD=22.27;ReadPosRankSum=0.892;VQSLOD=2.9866;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:39.05:0,39,376	./.	0/0:17,0:17:20.91:0,21,202	0/0:20,0:20:8.27:0,8,214	0/0:9,0:9:27.04:0,27,260	1/1:1,13:14:10.14:406,10,0	1/1:1,9:11:17.67:216,18,0	0/0:8,0:8:12.01:0,12,116	0/0:6,0:6:15.02:0,15,145	1/1:0,4:4:12.02:132,12,0	1/1:0,9:9:18.06:217,18,0	1/1:0,14:14:33.10:398,33,0	1/1:0,9:9:24.07:290,24,0	1/1:3,3:6:12.03:135,12,0	0/0:8,0:8:13.43:0,13,121	0/1:13,0:13:1.90:2,0,174	0/0:8,0:8:14.29:0,14,127	0/0:4,0:4:6.85:0,7,50	1/1:0,8:8:24.04:266,24,0	1/1:4,8:12:24.06:279,24,0	1/1:2,17:19:36.11:435,36,0	1/1:2,7:9:12.04:145,12,0	1/1:1,4:5:12.04:145,12,0	1/1:2,7:9:12.04:145,12,0	0/0:4,0:4:9.01:0,9,87	1/1:3,12:16:10.21:375,10,0	1/1:2,12:14:21.06:244,21,0	0/0:5,0:5:15.02:0,15,145
chr10	95428645	.	G	GAT	2432.96	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-10.364;DP=832;FS=3.533;HRun=0;HaplotypeScore=93.7789;InbreedingCoeff=0.9996;MQ=91.67;MQ0=0;MQRankSum=-3.986;QD=43.45;ReadPosRankSum=2.160;VQSLOD=5.2764;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,55:56:99:2528,135,0	0/0:13,0:13:39.09:0,39,533	0/0:38,0:38:98.54:0,99,1407	0/0:31,0:31:78.22:0,78,1109	0/0:26,0:26:75.25:0,75,1104	0/0:24,0:24:63.21:0,63,923	0/0:18,0:18:48.15:0,48,687	0/0:35,0:35:99:0,99,1369	0/0:26,0:26:78.25:0,78,1123	0/0:41,0:41:99:0,114,1679	0/0:14,0:14:42.14:0,42,618	0/0:36,0:36:99:0,108,1590	0/0:29,0:29:87.25:0,87,1236	0/0:32,0:32:90.30:0,90,1323	0/0:40,0:40:99:0,120,1747	0/0:47,0:47:99:0,138,2012	0/0:23,0:23:69.22:0,69,996	0/0:16,0:16:48.16:0,48,707	0/0:26,0:26:72.22:0,72,1023	0/0:30,0:30:84.27:0,84,1210	0/0:38,0:38:99:0,105,1523	0/0:22,0:22:66.22:0,66,954	0/0:25,0:25:66.22:0,66,967	0/0:41,0:41:99:0,120,1763	0/0:27,0:27:81.26:0,81,1174	0/0:34,0:34:99:0,99,1455	0/0:33,0:33:99:0,99,1457	0/0:11,0:11:33.11:0,33,486
chr10	95429268	.	GGTGTGTGTGTGTGT	G	4533.56	PASS	AB=0.694;AC=15;AF=0.288;AN=52;BaseQRankSum=9.327;DP=607;FS=7.240;HRun=0;HaplotypeScore=218.7404;InbreedingCoeff=0.8235;MQ=63.54;MQ0=16;MQRankSum=-9.952;QD=25.91;ReadPosRankSum=3.119;VQSLOD=3.0961;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:31:33.07:0,33,1067	1/1:4,4:8:9.03:292,9,0	./.	./.	1/1:14,9:23:9.03:352,9,0	0/0:15,0:19:39.12:0,39,1936	0/0:19,0:20:21.05:0,21,1125	0/0:15,0:14:13.59:0,14,291	0/1:14,3:24:99:454,0,193	0/0:34,0:34:54.16:0,54,2503	0/0:10,0:12:27.07:0,27,870	0/0:27,0:25:33.11:0,33,1882	0/0:19,0:19:33.11:0,33,1540	0/0:26,0:25:39.10:0,39,2020	1/1:20,18:38:10.98:689,11,0	1/1:16,13:29:9.97:807,10,0	1/1:14,0:24:19.24:681,19,0	1/1:8,0:15:15.05:489,15,0	0/0:10,0:10:4.83:0,5,206	0/0:21,0:20:30.09:0,30,1519	0/0:22,0:22:14.92:0,15,556	0/0:19,0:22:27.08:0,27,1461	0/0:15,0:17:39.13:0,39,2224	0/0:25,0:29:42.13:0,42,2239	1/1:4,7:13:21.07:771,21,0	0/0:22,0:21:33.09:0,33,1436	0/0:22,0:24:42.14:0,42,2170	0/0:2,0:7:9.03:0,9,308
chr10	95431085	.	GGTTT	G	4105.95	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.252;DP=718;FS=7.140;HRun=0;HaplotypeScore=112.6747;InbreedingCoeff=0.9361;MQ=62.85;MQ0=1;MQRankSum=1.251;QD=29.33;ReadPosRankSum=3.138;VQSLOD=3.3162;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:51.17:0,51,1193	1/1:2,6:8:15.05:242,15,0	0/0:19,0:15:20.72:0,21,385	0/0:9,0:8:6.48:0,6,64	1/1:8,22:30:48.16:773,48,0	0/0:34,0:34:57.20:0,57,1350	0/0:15,0:15:39.13:0,39,917	0/0:39,0:39:57.20:0,57,1302	1/1:2,20:22:45.15:725,45,0	0/0:40,0:40:93.32:0,93,2214	0/0:30,0:30:75.26:0,75,1783	0/0:29,0:29:63.22:0,63,1488	0/0:27,0:27:54.19:0,54,1301	0/0:27,0:27:12.08:0,12,1184	1/1:10,26:36:60.20:966,60,0	1/1:5,16:21:45.15:725,45,0	0/0:33,0:33:72.24:0,72,1620	0/0:26,0:26:59.79:0,60,1310	0/0:29,0:28:36.07:0,36,805	0/0:31,0:31:72.25:0,72,1712	0/0:12,0:12:27.09:0,27,628	0/0:22,1:23:2.88:0,3,1048	0/0:22,0:22:51.16:0,51,1180	0/0:17,0:17:39.09:0,39,844	1/1:9,14:23:42.14:676,42,0	0/0:32,0:32:66.20:0,66,1489	0/0:31,0:31:84.29:0,84,1926	0/0:23,0:23:60.21:0,60,1327
chr10	95434104	.	A	AAGCAGC	1074.07	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.533;DP=783;FS=2.323;HRun=0;HaplotypeScore=165.9581;InbreedingCoeff=0.9497;MQ=65.23;MQ0=0;MQRankSum=-6.112;QD=30.69;ReadPosRankSum=-0.107;VQSLOD=3.6097;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:81.26:0,81,1604	0/0:8,0:8:24.07:0,24,468	0/0:35,0:31:38.22:0,38,712	0/0:43,0:34:48.15:0,48,832	0/0:29,0:29:42.13:0,42,847	0/0:28,0:28:66.21:0,66,1331	0/0:23,0:23:39.13:0,39,797	0/0:31,0:31:60.18:0,60,1105	0/0:29,0:29:66.20:0,66,1303	0/0:28,0:29:47.74:0,48,880	0/0:25,0:25:30.09:0,30,560	0/0:35,0:35:84.26:0,84,1661	0/0:24,0:24:45.15:0,45,942	0/0:26,0:26:51.17:0,51,1068	0/0:45,0:45:99:0,99,2059	0/0:31,0:31:63.18:0,63,1206	1/1:7,17:25:27.09:891,27,0	1/1:5,5:10:9.03:297,9,0	0/0:24,0:24:36.10:0,36,595	0/0:25,0:25:48.15:0,48,962	0/0:27,0:27:60.18:0,60,1171	0/0:34,0:34:54.14:0,54,983	0/0:17,0:17:12.04:0,12,253	0/0:32,0:32:78.25:0,78,1567	0/0:29,0:29:51.15:0,51,1023	0/0:30,0:30:51.17:0,51,1015	0/0:33,0:33:84.27:0,84,1706	0/0:13,0:13:21.07:0,21,443
chr10	95434969	.	C	CT	7553.13	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-4.153;DP=653;FS=2.353;HRun=3;HaplotypeScore=104.3481;InbreedingCoeff=0.9974;MQ=81.40;MQ0=0;MQRankSum=-4.522;QD=43.66;ReadPosRankSum=2.826;VQSLOD=3.7600;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.32:0,96,1329	1/1:1,5:6:18.06:277,18,0	0/0:24,0:26:18.87:0,19,831	0/0:25,0:25:54.21:0,54,826	1/1:1,23:24:66.22:1037,66,0	0/0:23,0:23:66.22:0,66,909	0/0:26,0:26:75.21:0,75,1013	0/0:44,0:44:99:0,129,1769	1/1:0,16:16:45.15:718,45,0	0/0:21,0:21:60.05:0,60,828	0/0:21,0:21:59.81:0,60,818	0/0:24,0:24:72.24:0,72,995	0/0:25,0:25:69.23:0,69,956	0/0:17,0:17:48.16:0,48,660	1/1:1,27:28:78.27:1243,78,0	1/1:1,36:36:99:1627,102,0	1/1:0,13:13:36.12:574,36,0	1/1:0,13:13:36.12:576,36,0	0/0:18,0:18:54.18:0,54,751	0/0:15,0:15:42.13:0,42,563	0/0:25,0:25:75.21:0,75,1012	0/0:27,0:27:72.24:0,72,973	0/0:17,0:17:48.16:0,48,659	0/0:20,0:20:45.10:0,45,591	1/1:6,30:36:99:1501,99,0	0/0:32,0:32:96.32:0,96,1338	0/0:29,0:28:65.76:0,66,907	0/0:11,0:11:33.11:0,33,457
chr10	95435030	.	A	AAGTCTAGGGATCCTCCGCTGAACTCT	45155.47	PASS	AB=0.875;AC=54;AF=0.964;AN=56;BaseQRankSum=-4.875;DP=439;FS=15.974;HRun=0;HaplotypeScore=578.0745;InbreedingCoeff=-0.0422;MQ=68.27;MQ0=0;MQRankSum=-0.595;QD=102.86;ReadPosRankSum=2.097;VQSLOD=3.0561;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:12.28:1589,12,0	0/1:12,0:12:1.60:1222,0,2	1/1:6,1:11:18.02:1333,18,0	0/1:10,0:15:50.11:1405,0,50	1/1:27,0:27:48.26:2136,48,0	1/1:12,0:12:8.84:614,9,0	1/1:14,0:14:33.94:1631,34,0	1/1:17,0:17:51.16:2309,51,0	1/1:10,0:10:18.82:618,19,0	1/1:27,0:27:61.35:3289,61,0	1/1:11,0:11:25.68:1080,26,0	1/1:15,0:15:34.92:1598,35,0	1/1:13,0:13:29.31:1469,29,0	1/1:14,0:14:41.67:1393,42,0	1/1:17,0:17:28.08:1803,28,0	1/1:19,0:19:35.21:2120,35,0	1/1:8,0:8:8.48:703,8,0	1/1:4,0:4:8.24:387,8,0	1/1:8,0:8:24.08:1071,24,0	1/1:19,0:19:31.18:1864,31,0	1/1:11,0:11:21:544,21,0	1/1:27,0:27:45.72:2964,46,0	1/1:20,0:20:11.54:1619,12,0	1/1:14,0:14:8.93:562,9,0	1/1:25,0:25:49.52:3195,50,0	1/1:24,0:24:58.61:3136,59,0	1/1:22,0:20:47.10:2620,47,0	1/1:6,0:6:16.30:882,16,0
chr10	95435031	.	A	AGTCTAGGGATCCTAATAGCTTGCC	4441.82	PASS	AB=0.778;AC=21;AF=0.955;AN=22;BaseQRankSum=-3.082;DP=57;FS=5.381;HRun=0;HaplotypeScore=53.4845;InbreedingCoeff=-0.1538;MQ=166.79;MQ0=0;MQRankSum=-0.837;QD=88.84;ReadPosRankSum=-1.041;VQSLOD=3.5724;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	1/1:6,0:10:15.01:1183,15,0	0/1:10,1:14:53.12:1846,0,53	1/1:3,0:3:6:93,6,0	1/1:3,0:3:3.01:49,3,0	1/1:3,0:4:11.98:207,12,0	1/1:1,0:1:3:26,3,0	./.	1/1:2,0:2:3.01:99,3,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:1,0:3:9.03:350,9,0	1/1:1,0:1:3.01:74,3,0	1/1:5,0:7:17.99:375,18,0	./.	1/1:1,0:2:6:139,6,0	./.	./.	./.	./.	./.
chr10	95435082	.	C	CATGTGGTCCAATTGTGCTGTTC	57358.30	PASS	AB=0.769;AC=54;AF=0.964;AN=56;BaseQRankSum=-6.321;DP=453;FS=25.743;HRun=0;HaplotypeScore=541.5366;InbreedingCoeff=-0.0387;MQ=63.19;MQ0=0;MQRankSum=0.685;QD=126.62;ReadPosRankSum=1.255;VQSLOD=4.1568;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:51.16:2593,51,0	1/1:12,0:12:7.51:1395,8,0	0/1:9,0:5:14.07:1222,0,14	0/1:5,1:6:9.11:1398,0,9	1/1:22,0:22:32.33:2425,32,0	1/1:18,0:18:28.92:2086,29,0	1/1:14,0:14:35.30:1761,35,0	1/1:11,0:11:27.09:1003,27,0	1/1:17,0:17:39.61:2524,40,0	1/1:25,0:25:54.30:3454,54,0	1/1:27,0:27:61.45:3385,61,0	1/1:15,0:15:36.97:2018,37,0	1/1:13,0:13:16.76:1739,17,0	1/1:23,0:23:37.82:2274,38,0	1/1:21,0:21:46.91:2777,47,0	1/1:21,0:21:44.47:2557,44,0	1/1:11,0:11:21.07:1131,21,0	1/1:11,0:11:20.81:1256,21,0	1/1:12,0:12:23.97:875,24,0	1/1:20,0:20:41.84:2461,42,0	1/1:10,0:10:24.04:954,24,0	1/1:20,0:20:32.97:2496,33,0	1/1:22,0:22:45.63:3691,46,0	1/1:13,0:13:20.20:984,20,0	1/1:17,0:17:41.73:2907,42,0	1/1:22,0:22:54.63:3616,55,0	1/1:10,0:10:21.54:1312,22,0	1/1:6,0:6:18.02:1065,18,0
chr10	95436424	.	T	TC	28852.09	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.786;DP=794;FS=2.687;HRun=2;HaplotypeScore=70.5977;InbreedingCoeff=0.9954;MQ=83.64;MQ0=0;MQRankSum=-10.044;QD=38.62;ReadPosRankSum=7.197;VQSLOD=4.6160;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,43:44:99:1641,114,0	1/1:0,10:10:30.10:432,30,0	0/0:24,0:24:64.72:0,65,745	0/0:23,0:23:61.66:0,62,694	1/1:0,23:23:69.23:993,69,0	1/1:1,15:16:36.12:518,36,0	1/1:3,27:30:69.23:994,69,0	1/1:3,20:23:60.19:845,60,0	1/1:0,21:21:57.19:821,57,0	1/1:0,34:34:99:1400,99,0	1/1:0,11:11:33.02:443,33,0	1/1:2,32:34:93.31:1339,93,0	1/1:0,33:33:75.25:1079,75,0	1/1:2,43:45:99:1684,117,0	1/1:2,57:60:99:2323,163,0	1/1:2,29:31:87.29:1248,87,0	1/1:0,46:47:99:1849,123,0	1/1:0,19:19:51.17:734,51,0	1/1:3,19:22:48.53:732,49,0	1/1:0,18:18:54.11:740,54,0	1/1:2,53:55:99:2073,144,0	1/1:0,31:31:87.29:1253,87,0	1/1:1,16:17:48.16:691,48,0	1/1:1,25:26:72.24:1032,72,0	1/1:0,22:22:66.22:950,66,0	1/1:2,29:31:87.27:1224,87,0	1/1:1,37:37:99:1555,108,0	1/1:0,6:6:18.06:259,18,0
chr10	95437080	.	TA	T	67.14	PASS	AB=0.809;AC=9;AF=0.161;AN=56;BaseQRankSum=5.219;DP=633;FS=6.515;HRun=17;HaplotypeScore=89.1413;InbreedingCoeff=0.0169;MQ=67.73;MQ0=4;MQRankSum=0.457;QD=0.37;ReadPosRankSum=5.032;VQSLOD=-0.7513;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:43:31.99:92,32,0	0/0:7,0:7:14.92:0,15,112	0/0:25,0:14:4.83:0,5,72	0/0:14,0:11:7.19:0,7,45	0/0:27,2:30:11.50:0,12,149	0/0:15,2:18:13:0,13,185	0/0:26,1:27:14.97:0,15,281	0/1:12,4:18:32.86:33,0,37	0/0:30,0:31:24.96:0,25,256	0/0:21,1:22:23.85:0,24,180	0/1:16,2:19:4.37:4,0,163	0/0:19,1:20:22.25:0,22,159	0/0:15,2:17:4.14:0,4,119	0/0:29,1:31:18.71:0,19,184	0/0:21,0:27:14.27:0,14,193	0/0:30,2:32:17.36:0,17,322	0/0:10,0:27:27.71:0,28,168	0/0:10,0:22:15.21:0,15,98	0/1:13,1:16:5.69:6,0,68	0/0:20,2:27:13.81:0,14,249	0/0:13,3:17:5.83:0,6,220	0/1:17,6:24:19.52:20,0,130	0/0:23,0:23:1.15:0,1,83	0/1:13,7:21:30.51:31,0,56	0/0:16,3:20:3.36:0,3,183	0/0:13,1:14:4.15:0,4,120	0/1:25,5:30:11.86:12,0,178	0/1:6,0:9:0.63:1,0,19
chr10	95447271	.	G	GACACACAC	9600.53	PASS	AB=0.622;AC=17;AF=0.304;AN=56;BaseQRankSum=-10.155;DP=793;FS=15.253;HRun=0;HaplotypeScore=232.6522;InbreedingCoeff=0.7475;MQ=67.26;MQ0=8;MQRankSum=-11.403;QD=36.64;ReadPosRankSum=-1.459;VQSLOD=2.7740;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:31:23.30:289,23,0	1/1:5,6:13:15.05:555,15,0	0/0:32,0:25:30.03:0,30,669	0/0:32,0:29:43.01:0,43,660	1/1:14,10:30:23.73:860,24,0	0/0:9,0:31:60.69:0,61,420	0/0:14,0:39:33.05:0,33,331	0/0:21,0:33:12.15:0,12,275	1/1:12,11:28:39.13:1435,39,0	0/0:4,0:24:57.13:0,57,301	0/1:3,0:10:6.72:7,0,122	0/0:7,0:35:58.18:0,58,415	0/0:10,0:25:49.77:0,50,464	0/0:9,0:31:52.09:0,52,277	1/1:21,22:46:72.23:2835,72,0	1/1:13,19:36:59.96:2360,60,0	0/1:11,0:30:14.34:14,0,415	0/0:8,0:18:35.13:0,35,338	0/1:6,0:12:58.59:59,0,93	0/0:8,0:20:11.23:0,11,209	0/0:24,0:59:90.08:0,90,924	0/0:10,0:20:40.93:0,41,404	0/0:12,0:26:35.05:0,35,289	0/0:16,0:33:58.45:0,58,552	1/1:8,11:26:33.10:1186,33,0	0/0:10,0:27:30.34:0,30,368	0/0:6,0:27:43.38:0,43,354	0/0:3,0:15:16.88:0,17,86
chr10	95448631	.	CA	C	1286.03	PASS	AB=0.875;AC=5;AF=0.089;AN=56;BaseQRankSum=6.031;DP=837;FS=4.414;HRun=11;HaplotypeScore=95.5097;InbreedingCoeff=0.7128;MQ=65.41;MQ0=0;MQRankSum=-0.478;QD=14.61;ReadPosRankSum=2.905;VQSLOD=4.1547;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,1:54:89.52:0,90,689	0/0:12,0:13:38.90:0,39,387	0/1:18,3:19:42.94:43,0,180	0/0:24,2:24:11.24:0,11,245	0/0:29,0:31:69:0,69,712	0/0:19,0:19:45.10:0,45,470	0/0:43,2:45:67.91:0,68,1094	0/0:33,0:33:25.78:0,26,650	0/0:32,1:33:50.51:0,51,723	0/0:33,2:38:8.09:0,8,680	0/0:16,0:16:45.57:0,46,468	0/0:32,0:32:81.10:0,81,821	0/0:17,2:20:23.11:0,23,421	0/0:25,0:25:54.13:0,54,569	0/0:45,2:49:75.46:0,75,1139	0/0:37,3:40:25.29:0,25,872	1/1:3,32:36:65.94:737,66,0	1/1:4,27:31:77.87:635,78,0	0/0:27,1:28:41.50:0,41,638	0/0:30,3:33:31.85:0,32,736	0/0:41,1:42:71.56:0,72,945	0/0:28,2:33:18.77:0,19,622	0/0:20,0:21:50.94:0,51,510	0/0:40,2:42:58.95:0,59,1010	0/0:15,0:17:35.92:0,36,363	0/0:27,0:27:51.10:0,51,525	0/0:24,2:26:7.87:0,8,473	0/0:6,0:6:14.71:0,15,138
chr10	95456668	.	T	TAC	8993.39	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-4.228;DP=835;FS=2.213;HRun=0;HaplotypeScore=166.1231;InbreedingCoeff=0.9896;MQ=64.46;MQ0=0;MQRankSum=-6.093;QD=34.46;ReadPosRankSum=-0.979;VQSLOD=5.9254;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,11:28:44.89:688,45,0	1/1:4,8:12:21.07:333,21,0	0/0:34,0:26:47.30:0,47,547	0/0:38,0:29:20.18:0,20,568	1/1:10,17:27:51.17:825,51,0	0/0:38,0:38:93.26:0,93,1123	0/0:25,0:25:10.61:0,11,473	1/1:17,34:51:99:1584,102,0	1/1:4,17:21:54.10:824,54,0	0/0:36,0:36:75.07:0,75,892	0/0:32,0:33:90.09:0,90,1077	0/0:23,0:23:57.18:0,57,706	0/0:40,0:40:93.28:0,93,1139	0/0:37,0:38:90.08:0,90,1065	1/1:11,26:37:65.35:1292,65,0	1/1:16,28:44:91.45:1700,91,0	0/0:22,0:22:39.98:0,40,581	0/0:7,0:7:15.05:0,15,186	0/0:20,0:20:39.10:0,39,451	0/0:25,0:25:39.86:0,40,736	0/0:33,0:35:87.05:0,87,1012	0/0:27,0:27:72.23:0,72,892	0/0:34,0:34:75.17:0,75,910	0/0:25,0:25:60.15:0,60,715	1/1:5,16:21:51.12:777,51,0	0/0:33,0:33:78.18:0,78,950	0/0:41,0:41:87.27:0,87,1075	1/1:6,14:19:60.20:970,60,0
chr10	95456721	.	C	CAAG	39732.52	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.254;DP=827;FS=3.418;HRun=0;HaplotypeScore=122.5553;InbreedingCoeff=0.9831;MQ=80.83;MQ0=0;MQRankSum=-11.531;QD=51.40;ReadPosRankSum=5.545;VQSLOD=6.7358;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:30:66.16:1386,66,0	1/1:4,7:11:23.95:420,24,0	0/0:25,0:25:75.15:0,75,1133	0/0:29,0:29:32.49:0,32,1016	1/1:7,24:32:78:1508,78,0	1/1:4,32:37:84.22:1826,84,0	1/1:4,22:27:53.96:1205,54,0	1/1:11,21:32:84.25:1664,84,0	1/1:1,20:21:54.19:1203,54,0	1/1:3,28:32:87.26:1764,87,0	1/1:6,21:29:69.11:1392,69,0	1/1:4,27:31:75.05:1496,75,0	1/1:4,34:38:90.04:1811,90,0	1/1:4,33:38:87.21:1877,87,0	1/1:7,35:43:99:2229,111,0	1/1:6,46:53:99:2930,135,0	1/1:3,16:19:39.13:842,39,0	1/1:0,5:5:12.04:267,12,0	1/1:3,17:20:57.18:1177,57,0	1/1:3,27:30:75.05:1525,75,0	1/1:5,31:37:90.13:1881,90,0	1/1:2,31:34:90.18:1912,90,0	1/1:2,26:28:65.94:1473,66,0	1/1:1,29:30:75.19:1626,75,0	1/1:2,25:27:75.07:1487,75,0	1/1:3,28:32:87.22:1775,87,0	1/1:4,35:39:99:2168,102,0	1/1:2,13:17:42.08:887,42,0
chr10	95457656	.	TTGTGTGTGTG	T	2235.34	PASS	AB=0.935;AC=40;AF=0.800;AN=50;BaseQRankSum=4.790;DP=533;FS=22.216;HRun=0;HaplotypeScore=161.1846;InbreedingCoeff=-0.0478;MQ=57.19;MQ0=16;MQRankSum=0.764;QD=5.14;ReadPosRankSum=0.664;VQSLOD=1.3919;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,13:30:0.47:1,0,0	1/1:6,0:6:3.01:40,3,0	./.	0/0:36,0:17:3.01:0,3,67	1/1:17,0:19:2.13:19,2,0	1/1:14,0:16:3.47:26,3,0	0/1:17,0:17:36.90:89,0,37	0/1:30,0:29:0:0,0,0	./.	0/1:15,0:14:11.86:166,0,12	1/1:10,0:11:9.01:111,9,0	0/1:19,0:21:26.38:124,0,26	1/1:20,0:20:13.75:158,14,0	1/1:13,0:13:3.01:52,3,0	./.	1/1:12,0:15:3.01:46,3,0	1/1:9,0:10:6.02:162,6,0	1/1:13,0:13:6.49:166,6,0	0/1:20,0:20:21.14:46,0,21	0/1:16,0:16:12.94:92,0,13	0/1:29,12:38:0:0,0,0	1/1:14,0:15:14.69:295,15,0	1/1:13,0:14:5.97:79,6,0	1/1:23,0:24:5.94:116,6,0	1/1:10,1:15:3.01:51,3,0	0/1:21,0:22:21.93:178,0,22	1/1:9,1:12:9.02:100,9,0	1/1:2,0:5:9.03:239,9,0
chr10	95457720	.	GAGAGAGACAGAC	G	2532.05	PASS	AB=1.000;AC=24;AF=0.444;AN=54;BaseQRankSum=-4.236;DP=582;FS=2.026;HRun=0;HaplotypeScore=241.9262;InbreedingCoeff=0.1968;MQ=40.14;MQ0=41;MQRankSum=0.284;QD=6.86;ReadPosRankSum=-2.876;VQSLOD=2.3116;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:28:27.09:0,27,982	0/0:11,0:11:18.45:0,18,465	./.	0/0:5,0:1:3.01:0,3,66	0/0:25,0:24:8.61:0,9,307	0/1:23,0:22:11.77:151,0,12	0/1:19,0:16:0:0,0,0	0/0:27,0:23:56.07:0,56,558	0/0:13,0:13:6.49:0,6,105	0/1:21,0:20:69.20:69,0,207	1/1:17,0:15:7.43:147,7,0	0/1:25,0:24:99:102,0,109	0/1:28,0:24:27.58:245,0,28	1/1:15,0:14:8.20:123,8,0	0/0:19,0:18:9.03:0,9,317	0/0:22,0:22:20.96:0,21,611	1/1:14,0:11:19.63:199,20,0	1/1:6,7:11:14.79:307,15,0	0/1:14,0:13:53.86:244,0,54	1/1:15,0:14:25.88:305,26,0	0/1:33,0:26:26.08:117,0,26	1/1:24,0:23:6.02:99,6,0	1/1:23,0:22:8.36:66,8,0	0/1:27,0:23:85.64:86,0,94	0/0:36,0:35:15.05:0,15,517	0/1:33,0:30:99:199,0,225	0/1:25,0:22:59.63:252,0,60	0/0:21,0:18:41.55:0,42,1306
chr10	95457722	.	GAGAGACAGAC	G	4841.96	PASS	AB=0.985;AC=31;AF=0.554;AN=56;BaseQRankSum=-3.233;DP=584;FS=15.145;HRun=0;HaplotypeScore=218.9816;InbreedingCoeff=0.7254;MQ=40.70;MQ0=39;MQRankSum=4.923;QD=13.19;ReadPosRankSum=3.555;VQSLOD=2.6376;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:28:33.11:0,33,988	0/0:11,0:11:18.42:0,18,397	0/0:3,0:1:3.01:0,3,60	0/0:7,0:3:6.49:0,6,111	0/0:23,0:23:11.62:0,12,326	1/1:23,0:22:20.87:240,21,0	0/1:20,0:17:0:0,0,0	0/0:27,0:23:37.38:0,37,432	0/0:14,0:14:9.50:0,10,135	0/1:20,1:20:9.45:235,0,9	1/1:17,0:15:20.87:246,21,0	1/1:25,0:24:9.58:227,10,0	1/1:27,0:24:46.34:610,46,0	1/1:15,0:14:8.52:149,9,0	0/0:20,0:19:12.04:0,12,321	0/0:23,0:23:21.54:0,22,570	1/1:14,0:11:7.88:141,8,0	1/1:13,0:11:15.05:264,15,0	1/1:13,1:13:8.75:353,9,0	1/1:15,0:14:26.47:407,26,0	1/1:32,0:25:28.28:270,28,0	1/1:24,0:23:6.49:99,6,0	1/1:21,0:20:23.93:239,24,0	0/1:27,0:23:58.39:193,0,58	0/0:36,0:35:15.05:0,15,465	1/1:31,1:29:12.54:578,13,0	1/1:26,1:24:34.58:588,35,0	0/0:21,0:18:39.98:0,40,1155
chr10	95457724	.	GAGACAGAC	G	7117.11	PASS	AB=0.958;AC=32;AF=0.571;AN=56;BaseQRankSum=-4.590;DP=593;FS=6.129;HRun=0;HaplotypeScore=205.7367;InbreedingCoeff=0.8375;MQ=42.02;MQ0=39;MQRankSum=1.188;QD=19.34;ReadPosRankSum=4.020;VQSLOD=3.5418;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:27:33.11:0,33,906	0/0:11,0:11:15.02:0,15,346	0/0:5,0:3:9.03:0,9,150	0/0:11,0:5:9.43:0,9,129	0/0:23,0:23:11.59:0,12,295	1/1:24,1:24:23.70:340,24,0	0/1:19,1:17:0:0,0,0	0/0:28,0:24:33.01:0,33,479	0/0:15,0:15:9.03:0,9,135	1/1:19,1:19:35.51:548,36,0	1/1:17,0:15:20.59:346,21,0	1/1:24,1:24:30.86:419,31,0	1/1:26,1:24:53.70:866,54,0	1/1:9,6:14:11.77:184,12,0	0/0:19,0:18:12.04:0,12,286	0/0:22,0:23:24.08:0,24,579	1/1:14,0:11:10.94:147,11,0	1/1:13,0:11:18.06:285,18,0	1/1:14,0:13:24.03:425,24,0	1/1:14,1:14:26.72:432,27,0	1/1:30,0:23:31.33:450,31,0	1/1:11,14:24:6.01:99,6,0	1/1:20,0:19:24.08:389,24,0	0/1:26,1:23:39.71:269,0,40	0/0:36,0:35:15.05:0,15,412	1/1:31,3:31:63.18:1098,63,0	1/1:27,0:24:52.84:819,53,0	0/0:21,0:20:42.14:0,42,1099
chr10	95457726	.	GACAGAC	G	8995.22	PASS	AB=0.946;AC=31;AF=0.574;AN=54;BaseQRankSum=-5.307;DP=589;FS=4.394;HRun=0;HaplotypeScore=185.9055;InbreedingCoeff=0.7208;MQ=42.37;MQ0=39;MQRankSum=0.324;QD=24.18;ReadPosRankSum=3.330;VQSLOD=4.1450;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:27:33.11:0,33,803	0/0:11,0:11:13.33:0,13,311	0/0:7,0:5:15.05:0,15,258	0/0:11,0:5:9.43:0,9,129	0/0:21,0:21:11.88:0,12,264	1/1:24,1:24:23.54:438,24,0	./.	0/1:26,0:22:43.64:44,0,446	0/0:14,0:14:9.03:0,9,135	1/1:18,2:20:33.88:824,34,0	1/1:15,1:14:20.58:444,21,0	1/1:22,3:24:37.03:634,37,0	1/1:25,2:24:39.63:1056,40,0	1/1:13,2:14:12.40:185,12,0	0/0:19,0:18:12.04:0,12,257	0/0:23,0:23:19.40:0,19,512	0/1:15,0:12:18.17:176,0,18	1/1:13,0:11:18.06:267,18,0	1/1:13,1:13:27.90:453,28,0	1/1:15,0:14:26.98:444,27,0	1/1:28,0:22:30.57:627,31,0	1/1:23,2:24:6.49:99,6,0	1/1:18,1:18:24.51:524,25,0	0/1:21,3:22:20.33:369,0,20	0/0:37,0:36:21.07:0,21,479	1/1:34,1:32:71.98:1394,72,0	1/1:22,5:24:52.73:1019,53,0	0/0:23,0:20:34.23:0,34,944
chr10	95457796	.	GT	G	12687.37	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.654;DP=555;FS=3.445;HRun=8;HaplotypeScore=222.8883;InbreedingCoeff=0.9562;MQ=54.10;MQ0=1;MQRankSum=-5.351;QD=25.02;ReadPosRankSum=0.151;VQSLOD=1.9491;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:60.14:0,60,698	1/1:0,8:8:24.04:232,24,0	0/0:9,0:5:12.03:0,12,138	0/0:8,0:8:17.99:0,18,184	1/1:2,23:25:60.06:570,60,0	1/1:1,22:23:69.11:664,69,0	1/1:0,11:11:33.05:317,33,0	1/1:6,18:24:54.08:521,54,0	1/1:2,15:17:48.08:462,48,0	1/1:3,37:40:99:1100,114,0	1/1:0,23:23:60.08:578,60,0	1/1:3,22:25:69.11:664,69,0	1/1:6,15:21:42.06:405,42,0	1/1:4,22:26:66.10:634,66,0	1/1:1,19:20:54.08:520,54,0	1/1:2,16:18:45.06:430,45,0	1/1:1,7:8:15.02:144,15,0	1/1:1,7:8:18.03:174,18,0	1/1:5,20:25:60.08:573,60,0	1/1:2,19:21:60.09:576,60,0	1/1:0,3:3:9.01:87,9,0	1/1:3,18:21:57.09:547,57,0	1/1:1,21:22:63.10:606,63,0	1/1:5,13:18:30.03:284,30,0	1/1:2,28:30:84.12:807,84,0	1/1:7,22:29:78.12:752,78,0	1/1:2,18:20:57.09:550,57,0	1/1:2,19:21:51.08:492,51,0
chr10	95458704	.	CTG	C	27278.84	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.878;DP=809;FS=5.437;HRun=0;HaplotypeScore=110.1238;InbreedingCoeff=0.9984;MQ=83.02;MQ0=4;MQRankSum=-7.759;QD=38.69;ReadPosRankSum=5.018;VQSLOD=6.8464;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,1854	1/1:0,12:12:33.11:486,33,0	0/0:37,0:35:79.58:0,80,1508	0/0:31,0:28:54.21:0,54,879	1/1:0,24:24:66.22:957,66,0	1/1:0,26:26:78.26:1149,78,0	1/1:1,18:19:51.17:751,51,0	1/1:4,31:35:87.27:1242,87,0	1/1:0,27:26:75.25:1104,75,0	1/1:2,31:33:96.32:1403,96,0	1/1:1,31:32:72.24:1060,72,0	1/1:0,31:31:84.28:1237,84,0	1/1:2,35:36:99:1501,102,0	1/1:1,38:39:96.32:1414,96,0	1/1:1,34:35:93.31:1370,93,0	1/1:0,47:47:99:1811,123,0	1/1:2,26:28:66.22:972,66,0	1/1:0,21:21:60.20:884,60,0	1/1:2,15:17:42.14:619,42,0	1/1:1,35:35:99:1458,99,0	1/1:1,36:37:99:1502,102,0	1/1:1,24:25:66.22:972,66,0	1/1:1,18:19:41.63:618,42,0	1/1:2,28:30:75.25:1104,75,0	1/1:1,20:21:60.20:884,60,0	1/1:3,31:34:93.31:1368,93,0	1/1:0,32:31:75.25:1105,75,0	1/1:0,8:8:21.07:309,21,0
chr10	95459303	.	CCAAAAA	C	719.60	PASS	AB=0.818;AC=3;AF=0.054;AN=56;BaseQRankSum=3.819;DP=441;FS=4.007;HRun=0;HaplotypeScore=85.3969;InbreedingCoeff=0.7065;MQ=45.93;MQ0=29;MQRankSum=-1.571;QD=19.99;ReadPosRankSum=5.459;VQSLOD=2.4676;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:16:23.92:0,24,224	0/0:10,0:9:17.98:0,18,327	0/0:10,0:4:8.90:0,9,109	0/0:11,0:4:9.49:0,9,141	0/0:18,0:17:45.50:0,46,502	0/0:20,0:19:54.02:0,54,659	0/0:14,0:14:35.75:0,36,359	0/0:19,0:19:56.78:0,57,704	0/0:11,0:11:33.07:0,33,593	0/0:14,0:13:36.01:0,36,471	0/0:14,0:14:33.99:0,34,263	0/0:19,0:18:46.33:0,46,638	0/0:6,0:6:18.01:0,18,181	0/0:17,0:14:29.89:0,30,290	0/0:26,0:25:69:0,69,909	0/0:14,0:13:21.48:0,21,288	1/1:16,5:27:18.22:630,18,0	0/1:7,1:8:3.35:193,0,3	0/0:16,0:15:38.57:0,39,394	0/0:16,0:16:44.13:0,44,412	0/0:13,0:11:27.70:0,28,244	0/0:21,0:19:46.16:0,46,393	0/0:16,0:16:29.42:0,29,324	0/0:12,0:11:18.85:0,19,175	0/0:19,0:17:45.10:0,45,767	0/0:21,0:20:34.68:0,35,475	0/0:13,0:10:20.86:0,21,187	0/0:16,0:11:26.32:0,26,249
chr10	95459815	.	G	GA	32047.03	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-11.790;DP=799;FS=0.414;HRun=0;HaplotypeScore=66.5066;InbreedingCoeff=0.9996;MQ=67.78;MQ0=0;MQRankSum=-6.396;QD=45.65;ReadPosRankSum=2.809;VQSLOD=5.0405;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,160,2204	1/1:0,9:9:27.09:432,27,0	0/0:21,0:21:55.28:0,55,689	0/0:21,0:20:57.17:0,57,778	1/1:0,32:32:81.28:1295,81,0	1/1:1,27:28:81.28:1295,81,0	1/1:0,26:26:78.27:1247,78,0	1/1:1,24:25:75.23:1154,75,0	1/1:0,29:29:87.30:1388,87,0	1/1:1,31:32:93.32:1484,93,0	1/1:0,28:28:84.29:1343,84,0	1/1:1,20:22:60.20:950,60,0	1/1:0,27:27:78.27:1244,78,0	1/1:0,26:26:75.26:1199,75,0	1/1:0,52:52:99:2446,154,0	1/1:0,31:32:93.32:1476,93,0	1/1:0,38:38:99:1629,102,0	1/1:0,15:15:45.15:719,45,0	1/1:1,23:24:66.21:1029,66,0	1/1:0,33:33:93.32:1473,93,0	1/1:0,35:35:99:1583,99,0	1/1:0,23:23:66.23:1055,66,0	1/1:0,20:20:60.20:959,60,0	1/1:0,28:28:78.27:1247,78,0	1/1:0,23:23:63.21:1007,63,0	1/1:1,37:38:99:1807,114,0	1/1:0,42:42:99:1917,120,0	1/1:0,15:15:42.14:671,42,0
chr10	95460304	.	C	CT	1838.47	PASS	AB=0.833;AC=17;AF=0.304;AN=56;BaseQRankSum=8.442;DP=262;FS=4.429;HRun=0;HaplotypeScore=74.4719;InbreedingCoeff=0.6551;MQ=37.37;MQ0=10;MQRankSum=-5.887;QD=15.19;ReadPosRankSum=1.671;VQSLOD=4.9131;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:4.64:0,5,468	1/1:4,3:11:15.03:97,15,0	0/0:10,0:2:3.01:0,3,40	0/0:11,0:5:8.77:0,9,95	1/1:12,0:14:4.75:67,5,0	0/0:5,0:5:12.04:0,12,167	0/0:11,0:11:29.73:0,30,348	1/1:19,10:28:60.74:650,61,0	1/1:5,4:10:5.07:245,5,0	0/0:7,0:7:3.37:0,3,219	0/0:6,0:6:2.84:0,3,14	0/0:3,0:3:3.66:0,4,54	0/0:2,0:2:6.02:0,6,83	0/1:4,0:4:0.53:1,0,113	1/1:7,4:14:22.94:230,23,0	1/1:5,6:14:25.08:271,25,0	0/0:8,0:6:13.25:0,13,148	0/0:2,0:2:6.02:0,6,80	0/0:4,0:3:5.98:0,6,59	0/0:5,0:6:16.25:0,16,171	0/0:3,0:3:2.64:0,3,41	0/0:14,0:13:12.86:0,13,289	0/0:12,0:12:16.82:0,17,189	0/0:6,0:6:15.05:0,15,209	1/1:5,1:8:16.18:154,16,0	0/0:4,0:3:5.85:0,6,56	0/0:3,0:3:5.19:0,5,82	1/1:9,2:12:22.35:306,22,0
chr10	95460308	.	T	TC	1458.83	PASS	AB=0.918;AC=20;AF=0.370;AN=54;BaseQRankSum=9.022;DP=230;FS=0.000;HRun=5;HaplotypeScore=71.0041;InbreedingCoeff=0.3546;MQ=35.76;MQ0=10;MQRankSum=-5.591;QD=10.50;ReadPosRankSum=2.055;VQSLOD=0.6507;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:17:8.20:8,0,334	1/1:6,1:10:6.62:126,7,0	./.	0/0:8,0:3:3.01:0,3,37	1/1:4,3:13:12.06:83,12,0	0/0:5,0:5:12.04:0,12,143	0/0:10,0:10:17.85:0,18,227	1/1:20,7:25:65.96:578,66,0	1/1:7,0:9:17.09:147,17,0	0/0:4,0:4:2.39:0,2,102	0/0:5,0:5:0:0,0,0	0/1:4,0:3:1.94:2,0,31	0/0:2,0:2:6.02:0,6,71	0/1:4,0:4:12.63:13,0,65	0/1:12,0:14:8.08:98,0,8	1/1:11,2:14:11.35:207,11,0	0/0:7,0:5:8.25:0,8,107	0/0:2,0:2:3.01:0,3,37	0/0:4,0:3:6.02:0,6,66	0/0:5,0:5:0.09:0,0,45	0/1:3,0:3:14.48:14,0,31	0/0:12,0:11:23.60:0,24,273	0/0:9,0:9:9.33:0,9,136	0/0:6,0:6:12.04:0,12,148	1/1:2,0:5:14.71:100,15,0	0/1:3,1:3:28.10:64,0,28	0/0:3,0:3:5.19:0,5,69	1/1:6,2:9:25.07:192,25,0
chr10	95460310	.	CT	C	316.72	PASS	AB=0.935;AC=11;AF=0.204;AN=54;BaseQRankSum=4.935;DP=216;FS=6.443;HRun=1;HaplotypeScore=64.0388;InbreedingCoeff=-0.0977;MQ=35.47;MQ0=10;MQRankSum=-3.880;QD=2.96;ReadPosRankSum=0.722;VQSLOD=-0.4049;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:16:33.78:0,34,482	0/1:10,0:10:24.41:24,0,39	./.	0/0:6,0:3:3.01:0,3,43	1/1:14,0:13:7.66:34,8,0	0/0:5,0:5:12.04:0,12,175	0/0:8,0:8:21.03:0,21,281	0/1:24,2:23:59.35:126,0,59	0/1:9,0:8:19.62:20,0,20	0/0:4,0:4:11.63:0,12,143	0/0:5,0:5:0:0,0,0	0/0:4,0:3:7.92:0,8,62	0/0:2,0:2:6.02:0,6,87	0/0:4,0:3:8.39:0,8,92	0/1:14,0:14:47.35:47,0,71	0/1:13,1:14:32.13:102,0,32	0/0:7,0:5:0.93:0,1,119	0/0:2,0:2:3.01:0,3,43	0/0:3,0:2:6.02:0,6,90	0/1:3,1:3:19.70:20,0,75	0/1:3,0:3:1.67:2,0,37	0/0:12,0:11:27.83:0,28,375	0/0:10,0:9:13.62:0,14,168	0/0:5,0:5:12.04:0,12,169	0/0:5,0:5:3.21:0,3,18	0/1:4,0:3:1.60:2,0,81	0/0:3,0:3:1.94:0,2,83	0/1:6,3:9:10.98:71,0,11
chr10	95460312	.	C	CT	603.24	PASS	AB=0.939;AC=15;AF=0.288;AN=52;BaseQRankSum=6.079;DP=208;FS=0.000;HRun=1;HaplotypeScore=62.9224;InbreedingCoeff=-0.0685;MQ=34.92;MQ0=10;MQRankSum=-5.525;QD=5.03;ReadPosRankSum=3.489;VQSLOD=0.6097;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:29.32:0,29,430	0/1:9,1:10:21.37:42,0,21	./.	0/0:4,1:3:2.84:0,3,32	1/1:10,3:12:6.68:44,7,0	0/0:5,0:5:11.65:0,12,157	0/0:8,0:8:20.89:0,21,279	1/1:19,7:23:29.02:361,29,0	0/1:9,0:8:10.73:14,0,11	0/1:3,0:4:8.77:9,0,114	./.	0/1:3,0:3:17.34:18,0,17	0/0:2,0:2:6.02:0,6,83	0/0:4,0:3:8.52:0,9,92	0/1:12,0:13:22.21:36,0,22	0/1:11,2:13:43.26:80,0,43	0/0:7,0:5:3.56:0,4,112	0/0:1,0:1:3.01:0,3,42	0/0:3,0:2:6.02:0,6,84	0/0:4,0:3:4.59:0,5,60	0/1:3,0:3:12:12,0,34	0/0:11,0:11:10.49:0,10,316	0/1:10,0:9:6.78:7,0,127	0/0:5,0:5:11.95:0,12,160	0/1:5,0:5:4.51:10,0,5	0/1:3,1:3:30.94:31,0,54	0/0:3,0:3:6.91:0,7,83	0/1:4,2:6:4.87:89,0,5
chr10	95460317	.	T	TC	401.51	PASS	AB=0.898;AC=15;AF=0.288;AN=52;BaseQRankSum=1.306;DP=183;FS=0.000;HRun=2;HaplotypeScore=62.7197;InbreedingCoeff=-0.2436;MQ=33.33;MQ0=9;MQRankSum=-3.539;QD=3.06;ReadPosRankSum=0.174;VQSLOD=-0.3469;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,2:14:42:42,0,156	0/1:9,1:10:31.38:31,0,42	./.	./.	0/1:11,2:12:1.74:4,0,2	0/0:1,0:1:2.98:0,3,22	0/1:4,1:5:24.47:24,0,33	0/1:21,5:23:84.85:185,0,85	0/1:8,1:8:18.22:18,0,64	0/1:4,0:4:12.03:12,0,35	0/0:4,1:5:0:0,0,0	0/1:3,0:2:9.22:9,0,27	0/0:2,0:2:5.86:0,6,37	0/0:4,0:3:8.22:0,8,44	0/1:9,2:11:54.91:69,0,55	0/0:10,0:10:6.30:0,6,54	0/0:7,0:5:6.75:0,7,39	0/0:1,0:1:2.88:0,3,15	0/0:3,0:2:5.98:0,6,52	0/0:3,0:2:4.46:0,4,20	1/1:1,1:2:3.01:30,3,0	0/1:12,0:11:6.97:7,0,159	0/1:8,1:8:25.56:28,0,26	0/0:5,0:5:8.87:0,9,73	0/1:4,1:5:0.82:49,0,1	0/0:4,0:3:7.54:0,8,54	0/0:2,0:2:2.80:0,3,20	0/1:5,1:6:26.34:26,0,44
chr10	95460840	.	CTCCTCCTCCTCT	C	4263.59	PASS	AB=0.958;AC=36;AF=0.750;AN=48;BaseQRankSum=0.479;DP=261;FS=32.188;HRun=0;HaplotypeScore=86.4777;InbreedingCoeff=0.3018;MQ=43.18;MQ0=31;MQRankSum=-1.778;QD=20.40;ReadPosRankSum=1.544;VQSLOD=1.4867;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:28.71:0,29,662	0/0:1,0:1:3.01:0,3,34	0/0:16,0:5:1.28:0,1,58	0/0:6,0:2:5.67:0,6,35	1/1:9,0:8:3:26,3,0	1/1:2,10:12:12.04:342,12,0	1/1:4,16:18:9.03:290,9,0	1/1:9,0:6:5.91:38,6,0	./.	1/1:15,1:12:27.31:444,27,0	1/1:8,2:9:14.98:219,15,0	1/1:2,3:4:3.01:108,3,0	1/1:0,3:3:3.01:108,3,0	1/1:6,0:4:11.95:135,12,0	./.	0/1:11,0:10:23.65:24,0,41	1/1:11,0:10:2.84:14,3,0	./.	0/1:4,1:4:80.22:120,0,80	0/1:4,0:4:4.09:44,0,4	0/1:19,0:16:3.20:386,0,3	1/1:9,2:10:20.46:355,20,0	1/1:11,2:11:20.98:391,21,0	1/1:4,10:12:5.84:210,6,0	1/1:9,0:9:13.95:94,14,0	1/1:10,5:13:29.99:715,30,0	1/1:7,0:6:11.86:201,12,0	./.
chr10	95460843	.	CTCCTCCTCT	C	2855.70	PASS	AB=1.000;AC=40;AF=0.769;AN=52;BaseQRankSum=1.502;DP=268;FS=18.521;HRun=0;HaplotypeScore=82.7043;InbreedingCoeff=0.2837;MQ=43.14;MQ0=33;MQRankSum=-1.617;QD=13.04;ReadPosRankSum=0.280;VQSLOD=0.4765;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:29.39:0,29,551	0/0:1,0:1:2.88:0,3,15	0/0:16,0:5:1.28:0,1,58	0/0:5,0:2:5.92:0,6,41	1/1:9,0:8:3:26,3,0	1/1:12,0:12:12.04:178,12,0	1/1:21,0:19:11.99:186,12,0	1/1:7,3:6:5.94:41,6,0	1/1:2,0:2:3:26,3,0	1/1:17,0:13:35.22:393,35,0	1/1:9,0:8:14.98:137,15,0	1/1:5,0:4:3.01:67,3,0	1/1:3,0:3:3.01:67,3,0	1/1:6,0:4:11.87:80,12,0	./.	0/1:11,0:10:40.02:40,0,54	1/1:3,10:11:3.01:73,3,0	1/1:1,0:1:2.98:21,3,0	0/1:5,0:4:64.16:79,0,64	0/1:4,0:4:4.36:4,0,5	0/1:21,0:18:13.96:239,0,14	1/1:11,0:10:22.22:248,22,0	1/1:14,0:12:23.92:251,24,0	1/1:14,0:12:5.69:128,6,0	1/1:9,0:9:17.10:116,17,0	1/1:15,0:13:32.72:475,33,0	1/1:7,0:6:11.68:128,12,0	./.
chr10	95463980	.	G	GTC	768.74	PASS	AB=0.960;AC=30;AF=0.682;AN=44;BaseQRankSum=-0.515;DP=608;FS=6.636;HRun=0;HaplotypeScore=93.8646;InbreedingCoeff=0.0999;MQ=60.72;MQ0=34;MQRankSum=0.125;QD=1.99;ReadPosRankSum=-2.548;VQSLOD=0.6663;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:0.89:0,1,2	./.	./.	./.	1/1:20,0:20:8.99:77,9,0	1/1:25,0:24:3:25,3,0	1/1:16,0:15:5.85:57,6,0	./.	0/1:14,0:14:17.26:24,0,17	1/1:24,1:25:3.48:45,3,0	0/1:18,0:18:0:0,0,0	1/1:12,0:11:3:25,3,0	0/1:18,1:20:68.34:106,0,68	0/1:14,0:13:0:0,0,0	0/1:24,0:24:89.23:102,0,89	1/1:32,0:33:18.45:164,18,0	./.	0/0:11,0:11:2.84:0,3,14	1/1:17,0:16:2.98:7,3,0	0/1:24,0:23:0:0,0,0	0/0:19,0:19:2.99:0,3,24	1/1:14,0:14:3:25,3,0	0/1:15,0:15:0:0,0,0	0/1:20,5:26:25.46:37,0,25	1/1:29,0:29:6.46:77,6,0	1/1:22,0:22:3.01:43,3,0	1/1:16,0:16:6:66,6,0	./.
chr10	95464090	.	C	CT	6101.29	PASS	AB=0.570;AC=32;AF=0.571;AN=56;BaseQRankSum=-6.786;DP=479;FS=0.851;HRun=10;HaplotypeScore=60.4916;InbreedingCoeff=0.8052;MQ=67.39;MQ0=2;MQRankSum=-0.895;QD=22.27;ReadPosRankSum=1.428;VQSLOD=5.7459;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:53.91:0,54,443	0/0:4,0:4:8.99:0,9,74	0/0:18,0:13:13.94:0,14,166	0/0:22,0:21:5.07:0,5,127	0/0:20,1:21:11.97:0,12,294	1/1:6,16:22:45.11:480,45,0	1/1:4,13:17:20.45:415,20,0	0/0:32,0:32:53.80:0,54,435	0/0:9,0:9:11.99:0,12,98	1/1:5,13:18:17.46:391,17,0	1/1:2,15:17:42.02:423,42,0	1/1:0,8:8:15.04:160,15,0	1/1:2,10:12:27.07:288,27,0	1/1:4,10:14:8.43:290,8,0	0/0:25,0:25:53.92:0,54,440	0/0:22,1:23:6.93:0,7,264	1/1:2,20:22:38.51:615,39,0	1/1:4,14:18:39.10:416,39,0	1/1:3,14:17:41.14:422,41,0	1/1:1,12:14:35.84:341,36,0	0/1:4,17:20:4.17:371,0,4	1/1:4,7:11:15.04:160,15,0	1/1:3,21:24:51.13:542,51,0	0/1:3,7:10:25.23:168,0,25	0/0:15,0:15:41.93:0,42,342	1/1:2,14:17:17.08:333,17,0	1/1:1,10:12:27.07:287,27,0	0/0:9,0:9:17.97:0,18,148
chr10	95466942	.	AAAGAAAGGAAGG	A	3584.45	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=12.835;DP=592;FS=0.000;HRun=0;HaplotypeScore=189.1870;InbreedingCoeff=-0.2937;MQ=52.76;MQ0=6;MQRankSum=-8.701;QD=9.53;ReadPosRankSum=1.544;VQSLOD=2.0090;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:34:9.56:271,10,0	0/1:9,0:9:40.51:41,0,137	0/0:14,0:10:26.88:0,27,234	0/0:10,0:3:0.67:0,1,1	0/0:26,0:26:50.50:0,51,393	0/1:24,0:23:56.95:57,0,268	0/1:28,0:27:4.34:4,0,391	0/0:25,0:24:62.40:0,62,527	0/1:22,0:22:99:359,0,164	0/1:24,0:24:99:197,0,313	0/0:14,0:14:29.80:0,30,238	0/1:22,0:22:99:155,0,229	0/1:23,0:23:99:273,0,245	0/1:18,0:18:99:216,0,180	0/1:44,0:44:99:666,0,170	0/1:31,0:31:99:272,0,283	0/0:35,0:35:70.24:0,70,1410	0/0:21,0:21:45.07:0,45,814	0/1:12,0:12:99:156,0,170	0/1:9,0:9:75.50:76,0,101	0/0:19,0:18:18.73:0,19,232	0/1:17,0:17:4.61:5,0,208	0/0:16,0:16:29.69:0,30,215	0/0:27,0:27:25.01:0,25,263	0/1:13,0:13:62.67:63,0,89	0/1:18,0:18:99:295,0,169	0/1:28,0:27:99:480,0,263	0/0:9,0:9:23.77:0,24,166
chr10	95466946	.	AAAGGAAGGAAGGAAGG	A	8179.42	PASS	AB=0.774;AC=37;AF=0.804;AN=46;BaseQRankSum=1.713;DP=577;FS=5.474;HRun=0;HaplotypeScore=202.1481;InbreedingCoeff=0.5449;MQ=51.92;MQ0=6;MQRankSum=-3.952;QD=20.30;ReadPosRankSum=-0.292;VQSLOD=3.3387;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:23.47:0,23,240	1/1:5,0:9:3.01:112,3,0	./.	./.	0/1:17,0:24:13.93:14,0,76	1/1:13,11:23:6.02:225,6,0	1/1:17,10:26:3.01:117,3,0	1/1:23,0:22:0.89:2,1,0	1/1:8,0:21:21.07:711,21,0	1/1:14,10:24:24.08:748,24,0	./.	1/1:10,10:20:9.03:393,9,0	1/1:11,13:24:15.05:655,15,0	1/1:7,10:17:12.04:512,12,0	1/1:10,0:42:39.13:1323,39,0	1/1:14,0:31:15.05:559,15,0	0/0:20,0:35:38.96:0,39,1605	0/0:10,0:21:21.07:0,21,856	1/1:10,3:13:4.26:386,4,0	1/1:5,5:10:9.03:250,9,0	1/1:13,7:19:3.01:53,3,0	1/1:11,0:16:2.84:97,3,0	./.	0/0:16,12:28:2.97:0,3,20	1/1:4,0:13:6.02:174,6,0	1/1:9,8:17:18.06:708,18,0	1/1:13,15:28:27.09:1141,27,0	./.
chr10	95471993	.	GGGCTA	G	1832.18	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.811;DP=602;FS=4.562;HRun=0;HaplotypeScore=108.5918;InbreedingCoeff=0.9914;MQ=82.50;MQ0=0;MQRankSum=-2.898;QD=52.35;ReadPosRankSum=4.016;VQSLOD=4.1986;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,3042	0/0:6,0:6:15.05:0,15,471	0/0:23,0:23:69.23:0,69,2012	0/0:12,0:12:33.11:0,33,990	0/0:35,0:35:99:0,105,3313	0/0:26,0:26:75.18:0,75,2138	0/0:24,0:24:72.23:0,72,2206	0/0:36,0:36:99:0,102,3062	0/0:13,0:13:39.13:0,39,1191	0/0:25,0:25:69.24:0,69,2158	0/0:19,0:19:57.20:0,57,1779	0/0:16,0:16:45.15:0,45,1424	0/0:21,0:21:60.19:0,60,1762	0/0:19,0:19:51.15:0,51,1411	0/0:21,0:21:63.19:0,63,1856	0/0:20,0:20:57.19:0,57,1766	1/1:0,23:23:60.21:1302,60,0	1/1:0,12:12:30.10:651,30,0	0/0:16,0:16:45.15:0,45,1379	0/0:25,0:25:69.24:0,69,2182	0/0:36,0:36:99:0,108,3371	0/0:19,0:19:54.19:0,54,1578	0/0:19,0:19:57.20:0,57,1806	0/0:13,0:13:36.12:0,36,1092	0/0:24,0:24:66.21:0,66,1969	0/0:25,0:25:72.25:0,72,2269	0/0:27,0:27:81.26:0,81,2399	0/0:13,0:13:39.13:0,39,1222
chr10	95472179	.	C	CTTTTTTTTTT	13578.05	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=2.386;DP=560;FS=25.821;HRun=11;HaplotypeScore=198.6536;InbreedingCoeff=0.6320;MQ=72.63;MQ0=1;MQRankSum=-7.221;QD=27.82;ReadPosRankSum=-4.436;VQSLOD=-0.5918;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:35:77.24:0,77,1814	1/1:7,0:7:12.01:281,12,0	0/1:39,0:30:8.54:9,0,424	0/0:32,0:25:13.43:0,13,481	1/1:7,3:19:16.30:496,16,0	1/1:21,0:21:36.12:1239,36,0	1/1:12,0:12:21.03:556,21,0	1/1:24,0:35:38.14:842,38,0	1/1:9,0:9:8.91:156,9,0	1/1:26,0:25:21.04:522,21,0	1/1:27,0:27:21.07:724,21,0	1/1:16,0:15:27.09:991,27,0	1/1:19,0:19:24.07:736,24,0	1/1:18,0:16:12.04:410,12,0	1/1:25,0:25:30.99:1044,31,0	1/1:22,0:21:24.08:840,24,0	1/1:19,0:19:15.05:513,15,0	0/0:5,0:5:1.66:0,2,5	1/1:22,0:21:15.05:554,15,0	1/1:21,0:21:33.11:1074,33,0	1/1:8,0:8:9.50:291,10,0	1/1:11,0:11:17.42:476,17,0	1/1:10,0:10:11.40:351,11,0	0/1:4,0:4:0:0,0,0	1/1:5,0:16:3.01:141,3,0	1/1:19,0:18:12.01:338,12,0	1/1:36,0:34:23.96:744,24,0	1/1:13,1:22:9.03:250,9,0
chr10	95472317	.	C	CTTGT	7686.36	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-12.817;DP=652;FS=0.810;HRun=0;HaplotypeScore=102.3204;InbreedingCoeff=0.9806;MQ=68.00;MQ0=2;MQRankSum=-3.231;QD=39.62;ReadPosRankSum=0.173;VQSLOD=4.9244;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:52.14:0,52,874	1/1:1,7:8:21.07:495,21,0	0/0:28,0:24:32.36:0,32,425	0/0:20,0:17:15.03:0,15,216	1/1:11,24:35:60.11:1228,60,0	0/0:18,0:18:33.07:0,33,513	0/0:10,0:10:24.06:0,24,369	1/1:18,18:39:60.12:1060,60,0	1/1:1,16:20:30.10:715,30,0	0/0:20,0:20:51.15:0,51,775	0/0:31,0:31:72.21:0,72,1106	0/0:17,0:17:33.01:0,33,436	0/0:26,0:26:54.17:0,54,860	0/0:19,0:19:39.12:0,39,615	1/1:6,25:31:54.19:1317,54,0	1/1:4,23:28:57.16:1338,57,0	0/0:31,0:31:66.23:0,66,1080	0/0:22,0:22:60.17:0,60,923	0/0:20,0:20:39.04:0,39,549	0/0:30,0:30:75.25:0,75,1228	0/0:36,0:36:84.24:0,84,1303	0/0:14,0:14:36.10:0,36,536	0/0:20,0:20:54.16:0,54,838	0/0:23,0:23:6.71:0,7,695	1/1:2,13:16:36.12:875,36,0	0/0:22,0:22:39.10:0,39,592	0/0:23,0:23:48.12:0,48,759	1/1:2,14:16:27.09:658,27,0
chr10	95472945	.	T	TA	213.22	PASS	AB=0.968;AC=8;AF=0.143;AN=56;BaseQRankSum=6.556;DP=429;FS=3.930;HRun=0;HaplotypeScore=104.2585;InbreedingCoeff=-0.0130;MQ=40.34;MQ0=59;MQRankSum=-2.133;QD=2.07;ReadPosRankSum=1.281;VQSLOD=2.6574;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:21:36.08:0,36,448	0/0:8,0:7:18.53:0,19,249	0/0:14,0:3:3.01:0,3,41	0/0:14,0:1:2.90:0,3,16	0/0:23,0:19:18.06:0,18,249	0/0:14,0:11:5.21:0,5,122	0/1:18,0:13:28.78:29,0,126	0/0:12,0:10:30.05:0,30,377	0/0:12,0:9:18.06:0,18,241	0/1:17,0:11:10.81:11,0,126	0/0:12,0:10:3.01:0,3,41	0/0:15,0:12:6.82:0,7,161	1/1:10,1:9:6.83:95,7,0	0/0:14,0:10:8.49:0,8,102	0/0:24,0:23:36.07:0,36,475	0/0:24,0:22:45.13:0,45,603	0/0:15,0:13:23.92:0,24,331	0/0:21,0:17:46.32:0,46,524	0/1:6,0:5:41.82:81,0,42	0/0:9,0:8:4.72:0,5,76	0/1:21,2:19:26.76:81,0,27	0/1:7,1:5:33.59:34,0,104	0/0:16,0:13:9:0,9,106	0/0:17,0:11:3.68:0,4,43	0/0:13,0:13:22.30:0,22,274	0/1:20,0:16:13.47:13,0,151	0/0:13,0:10:12.16:0,12,143	0/0:12,0:11:33.11:0,33,455
chr10	95472967	.	TGAGTGTGA	T	7797.35	PASS	AB=0.800;AC=46;AF=0.885;AN=52;BaseQRankSum=-2.372;DP=388;FS=29.407;HRun=0;HaplotypeScore=94.6616;InbreedingCoeff=0.5114;MQ=54.91;MQ0=42;MQRankSum=0.726;QD=25.15;ReadPosRankSum=2.993;VQSLOD=2.5398;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:4.76:30,5,0	1/1:6,0:6:14.14:225,14,0	0/1:28,0:10:0.90:1,0,297	0/0:44,0:14:24:0,24,353	./.	1/1:11,0:9:11.07:155,11,0	1/1:22,0:17:29.82:498,30,0	1/1:7,0:6:18.06:319,18,0	1/1:6,0:4:12.04:184,12,0	0/1:4,0:9:25.50:289,0,26	0/0:1,9:9:0:0,0,0	1/1:10,0:7:9.03:150,9,0	1/1:10,0:9:24.01:347,24,0	1/1:8,0:5:9.03:145,9,0	1/1:10,0:10:18.06:300,18,0	1/1:14,0:13:30.10:499,30,0	1/1:13,0:11:27:403,27,0	1/1:13,0:11:33.11:509,33,0	1/1:8,0:7:21.07:354,21,0	1/1:10,0:10:18.06:291,18,0	1/1:20,0:17:18.97:291,19,0	1/1:6,0:5:12.04:200,12,0	./.	1/1:21,0:16:23.18:389,23,0	1/1:7,0:7:18.06:300,18,0	1/1:17,0:15:42.14:716,42,0	1/1:18,0:16:48.16:726,48,0	1/1:11,0:10:30.10:477,30,0
chr10	95473406	.	GTGCTACAGGGCATCACTAAA	G	16210.72	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=13.388;DP=814;FS=16.052;HRun=0;HaplotypeScore=415.0215;InbreedingCoeff=0.9622;MQ=81.45;MQ0=0;MQRankSum=-9.902;QD=39.16;ReadPosRankSum=2.915;VQSLOD=1.8937;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,117,9041	0/0:15,0:15:33.11:0,33,2297	0/0:34,0:37:71.99:0,72,1978	0/0:36,0:38:77.41:0,77,2221	0/0:23,0:23:51.18:0,51,3501	1/1:10,17:27:21.07:1122,21,0	1/1:7,10:17:9.03:482,9,0	0/0:26,0:26:30.09:0,30,1392	0/0:41,0:41:99:0,111,8500	1/1:14,19:32:56.65:1120,57,0	1/1:6,10:16:17.98:773,18,0	1/1:18,27:45:42.55:2253,43,0	1/1:15,19:34:24.08:1287,24,0	1/1:11,21:32:23.65:1250,24,0	0/0:40,0:40:99:0,111,7951	0/0:40,0:40:96.32:0,96,7688	0/0:35,0:35:81.28:0,81,5921	0/0:19,0:19:48.16:0,48,3736	1/1:7,11:18:32.86:681,33,0	1/1:6,11:17:23.87:855,24,0	1/1:27,0:27:20.98:315,21,0	1/1:20,14:34:38.56:1640,39,0	1/1:10,9:19:14.86:773,15,0	1/1:7,16:23:2.94:160,3,0	0/0:28,0:28:48.15:0,48,4015	1/1:9,22:31:53.05:1579,53,0	1/1:12,29:41:35.33:1921,35,0	0/0:9,0:9:27.09:0,27,1817
chr10	95473774	.	AGT	A	6711.92	PASS	AC=44;AF=0.880;AN=50;BaseQRankSum=1.085;DP=575;FS=5.455;HRun=0;HaplotypeScore=99.7234;InbreedingCoeff=0.7048;MQ=60.79;MQ0=38;MQRankSum=1.529;QD=15.54;ReadPosRankSum=2.103;VQSLOD=4.2872;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,1:49:86.68:0,87,1187	1/1:12,0:12:18.06:229,18,0	0/0:21,0:7:0.24:0,0,33	0/0:27,0:12:17.85:0,18,246	./.	1/1:20,0:18:39.11:482,39,0	1/1:28,3:30:65.79:800,66,0	1/1:11,18:26:51.11:594,51,0	1/1:17,0:17:45.99:528,46,0	1/1:1,17:17:39.05:448,39,0	1/1:4,10:14:3.01:33,3,0	1/1:18,3:20:14.92:133,15,0	1/1:15,2:14:12.87:282,13,0	1/1:10,1:9:15.03:173,15,0	1/1:25,2:26:5.50:43,5,0	1/1:20,1:19:35.58:401,36,0	1/1:6,0:20:39:375,39,0	1/1:3,0:13:30.05:296,30,0	1/1:6,8:14:22.82:237,23,0	./.	1/1:9,15:22:9.01:95,9,0	./.	1/1:2,16:17:3.01:38,3,0	1/1:28,4:32:51.08:596,51,0	1/1:10,0:8:15.04:182,15,0	1/1:8,14:20:36.08:438,36,0	1/1:19,6:24:17.48:179,17,0	1/1:6,0:5:14.59:132,15,0
chr10	95473777	.	GTGTGTGTGTA	G	3052.62	PASS	AB=0.974;AC=42;AF=0.808;AN=52;BaseQRankSum=6.304;DP=579;FS=0.616;HRun=0;HaplotypeScore=167.0581;InbreedingCoeff=0.2812;MQ=57.80;MQ0=40;MQRankSum=1.906;QD=6.77;ReadPosRankSum=4.127;VQSLOD=2.6327;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:53:80.94:0,81,780	0/1:11,0:11:6.30:51,0,6	0/1:19,0:5:14.29:14,0,16	0/0:27,0:12:4.86:0,5,132	./.	1/1:21,0:19:33.73:165,34,0	1/1:32,0:29:62.76:323,63,0	0/1:35,0:32:17.04:139,0,17	1/1:18,0:17:21.75:201,22,0	1/1:18,0:17:35.58:188,36,0	1/1:15,0:15:2.90:16,3,0	1/1:7,12:18:14.62:309,15,0	0/1:15,2:13:38.11:272,0,38	1/1:10,0:8:11.17:55,11,0	1/1:25,0:24:1.51:3,2,0	1/1:22,0:19:10.24:141,10,0	1/1:22,0:19:25.64:84,26,0	1/1:17,0:13:20.56:118,21,0	1/1:16,0:16:0.55:86,1,0	./.	1/1:24,0:20:8.38:40,8,0	0/0:13,0:13:0.47:0,0,1	1/1:17,0:16:2.84:14,3,0	1/1:32,0:32:44.75:242,45,0	1/1:8,0:6:14.22:73,14,0	1/1:23,0:20:31.48:169,31,0	1/1:13,11:23:16.01:399,16,0	1/1:6,0:5:8.43:89,8,0
chr10	95473781	.	GTGTGTA	G	2889.02	PASS	AB=1.000;AC=42;AF=0.808;AN=52;BaseQRankSum=7.955;DP=569;FS=3.805;HRun=0;HaplotypeScore=135.1754;InbreedingCoeff=0.2840;MQ=54.98;MQ0=46;MQRankSum=2.052;QD=6.54;ReadPosRankSum=5.276;VQSLOD=2.3003;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:53:14.12:0,14,540	1/1:10,0:10:16.95:83,17,0	0/1:18,0:4:14.29:14,0,16	0/0:25,0:10:4.86:0,5,132	./.	1/1:20,0:18:33.73:165,34,0	1/1:33,0:30:49.62:307,50,0	0/1:32,0:29:26.96:136,0,27	1/1:20,0:19:31.87:240,32,0	1/1:19,0:18:28.28:178,28,0	1/1:14,0:14:2.90:16,3,0	1/1:17,0:17:14.62:174,15,0	0/1:17,0:13:19.59:185,0,20	1/1:11,0:9:11.17:55,11,0	1/1:8,16:24:4.70:134,5,0	1/1:22,0:18:31.50:254,31,0	1/1:23,0:18:21.27:78,21,0	1/1:16,0:12:20.79:92,21,0	0/1:11,0:11:12.48:83,0,12	./.	1/1:26,0:21:8.38:40,8,0	0/0:14,0:14:0.47:0,0,1	1/1:17,0:16:2.84:14,3,0	1/1:32,0:31:44.62:241,45,0	1/1:8,0:6:14.22:73,14,0	1/1:21,0:17:34.48:198,34,0	1/1:23,0:22:16.47:220,16,0	1/1:6,0:5:8.42:51,8,0
chr10	95473787	.	ATGTGTG	A	607.67	PASS	AB=0.972;AC=25;AF=0.543;AN=46;BaseQRankSum=3.921;DP=589;FS=4.949;HRun=0;HaplotypeScore=145.6502;InbreedingCoeff=0.2068;MQ=50.61;MQ0=60;MQRankSum=-2.473;QD=1.92;ReadPosRankSum=3.466;VQSLOD=2.5155;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:49,6:53:31.24:53,0,31	0/1:9,0:9:3.58:12,0,4	./.	0/1:21,0:7:0:0,0,0	./.	./.	0/0:33,0:30:5.23:0,5,42	0/0:31,0:26:0:0,0,0	1/1:19,0:19:2.94:45,3,0	0/0:22,0:20:8.76:0,9,53	./.	0/1:17,0:17:1.65:107,0,2	0/1:22,0:18:44.62:67,0,45	0/0:12,0:9:2.97:0,3,20	1/1:22,0:23:4.05:99,4,0	1/1:19,0:17:6.49:85,6,0	./.	1/1:17,0:13:0.13:34,0,0	1/1:13,0:12:2.22:7,2,0	1/1:14,0:12:2.84:14,3,0	0/0:32,0:27:6.04:0,6,42	0/0:14,0:14:6.44:0,6,45	0/1:19,0:18:0:0,0,0	0/0:36,0:34:6.06:0,6,42	1/1:9,0:6:2.22:7,2,0	0/1:26,0:20:11.73:12,0,32	1/1:17,0:19:11.19:156,11,0	1/1:6,0:5:5.23:39,5,0
chr10	95476672	.	TACACAC	T	1949.80	PASS	AB=0.833;AC=25;AF=0.481;AN=52;BaseQRankSum=1.928;DP=613;FS=4.931;HRun=0;HaplotypeScore=128.7915;InbreedingCoeff=-0.0487;MQ=56.43;MQ0=12;MQRankSum=-3.966;QD=4.42;ReadPosRankSum=1.388;VQSLOD=2.3376;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:18.03:0,18,435	0/0:10,0:10:9.03:0,9,114	./.	./.	0/0:14,0:16:12.04:0,12,177	0/1:21,2:21:19.50:246,0,19	1/1:24,0:24:2.59:59,3,0	0/0:27,0:27:14.72:0,15,92	0/0:13,0:15:15.05:0,15,197	1/1:12,3:15:5.92:120,6,0	0/1:8,0:8:0:0,0,0	0/1:19,10:29:9.01:54,0,9	0/1:17,4:22:11.62:294,0,12	0/1:11,1:12:14.88:93,0,15	0/1:19,1:27:39.73:40,0,168	0/1:15,2:31:98.63:99,0,204	0/1:20,10:30:54.24:54,0,68	0/1:15,3:18:15.23:108,0,15	1/1:23,0:22:3.01:45,3,0	0/1:22,8:31:5.97:283,0,6	1/1:30,0:32:2.98:59,3,0	1/1:12,11:25:1.97:325,2,0	0/1:10,0:9:2.57:31,0,3	0/1:21,11:33:9.97:36,0,10	0/0:16,0:18:11.16:0,11,168	1/1:24,5:28:5.60:104,6,0	0/1:15,1:16:15.93:54,0,16	0/0:7,0:10:18.06:0,18,243
chr10	95479689	.	A	AT	282.89	PASS	AB=0.656;AC=12;AF=0.500;AN=24;BaseQRankSum=0.000;DP=71;FS=0.000;HRun=1;HaplotypeScore=41.3002;InbreedingCoeff=0.3917;MQ=50.28;MQ0=1;MQRankSum=-0.978;QD=12.86;ReadPosRankSum=1.708;VQSLOD=2.2940;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,7:12:1.50:0,1,4	./.	./.	0/0:6,0:1:0:0,0,0	0/1:2,3:5:0:0,0,0	./.	./.	./.	./.	1/1:0,2:2:6.02:90,6,0	./.	./.	./.	./.	0/1:0,3:3:0:0,0,0	./.	0/0:1,3:4:1.53:0,2,4	0/1:1,0:1:0:0,0,0	./.	./.	./.	0/1:0,1:1:0:0,0,0	./.	0/0:0,5:4:1.53:0,2,4	./.	1/1:2,3:5:9.03:135,9,0	1/1:0,2:2:3.01:45,3,0	1/1:0,3:3:6.02:90,6,0
chr10	95479694	.	G	GT	2278.02	PASS	AC=44;AF=0.917;AN=48;BaseQRankSum=-0.482;DP=84;FS=0.000;HRun=2;HaplotypeScore=28.8994;InbreedingCoeff=0.0951;MQ=54.42;MQ0=1;MQRankSum=-0.942;QD=33.01;ReadPosRankSum=0.859;VQSLOD=2.9010;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,12:13:28.93:429,29,0	1/1:0,1:1:3.01:43,3,0	0/0:6,0:2:0.47:0,0,1	0/0:9,0:2:0:0,0,0	1/1:2,4:6:12.01:150,12,0	1/1:0,3:2:6.02:86,6,0	1/1:0,1:1:3.01:43,3,0	./.	./.	1/1:0,2:2:6.02:86,6,0	1/1:0,1:1:3.01:43,3,0	1/1:0,3:2:6.02:86,6,0	1/1:0,1:1:3.01:43,3,0	1/1:0,1:1:3.01:43,3,0	1/1:0,3:3:9.03:129,9,0	1/1:1,3:4:9.03:129,9,0	1/1:0,4:4:12.04:172,12,0	1/1:1,1:2:5.75:55,6,0	./.	1/1:0,3:3:9.03:129,9,0	./.	1/1:0,1:1:3.01:43,3,0	1/1:0,1:1:3.01:43,3,0	1/1:0,5:4:3.96:83,4,0	1/1:1,3:3:6.02:85,6,0	1/1:0,5:5:15.05:216,15,0	1/1:0,2:2:6.02:86,6,0	1/1:0,3:3:9.03:129,9,0
chr10	95479701	.	C	CTT	2070.27	PASS	AB=1.000;AC=47;AF=0.940;AN=50;BaseQRankSum=-1.146;DP=104;FS=10.283;HRun=10;HaplotypeScore=28.2164;InbreedingCoeff=0.1559;MQ=60.58;MQ0=2;MQRankSum=-2.824;QD=22.75;ReadPosRankSum=2.566;VQSLOD=1.0259;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:36.08:509,36,0	1/1:0,1:1:3.01:44,3,0	0/0:13,0:3:5.65:0,6,41	0/1:19,0:6:2.20:15,0,2	1/1:3,0:6:11.98:112,12,0	1/1:0,3:2:6.02:89,6,0	1/1:0,1:1:3.01:45,3,0	./.	./.	1/1:0,2:2:6.02:89,6,0	1/1:0,1:1:3.01:45,3,0	1/1:1,2:2:6.02:89,6,0	1/1:0,1:1:3.01:45,3,0	1/1:0,1:1:3.01:45,3,0	1/1:0,0:3:9.01:83,9,0	1/1:2,0:4:11.86:92,12,0	1/1:0,3:4:11.53:143,12,0	1/1:1,1:2:0.47:1,0,0	./.	1/1:1,2:3:8.99:109,9,0	1/1:1,0:1:3.01:44,3,0	1/1:0,1:1:3.01:45,3,0	1/1:0,1:1:3.01:45,3,0	1/1:0,4:4:8.47:73,8,0	1/1:3,0:4:8.72:61,9,0	1/1:0,4:5:15.02:201,15,0	1/1:1,1:2:6.02:89,6,0	1/1:2,0:3:6:54,6,0
chr10	95481307	.	TTG	T	5852.52	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=-1.644;DP=547;FS=0.787;HRun=0;HaplotypeScore=130.7533;InbreedingCoeff=0.8112;MQ=57.45;MQ0=8;MQRankSum=0.873;QD=17.79;ReadPosRankSum=-1.945;VQSLOD=4.2792;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:21:30.70:31,0,163	0/0:6,0:6:14.45:0,14,93	0/1:30,0:13:15.91:16,0,127	0/0:23,0:11:3.22:0,3,36	0/0:32,0:32:9.75:0,10,230	1/1:22,2:23:65.95:598,66,0	1/1:12,0:12:26.97:235,27,0	0/0:34,0:34:13.99:0,14,352	0/0:16,0:16:24.86:0,25,218	1/1:24,0:24:62.84:577,63,0	1/1:22,1:23:59.56:488,60,0	1/1:18,0:17:36.58:291,37,0	1/1:11,1:12:31.23:275,31,0	1/1:19,2:20:47.47:391,47,0	0/0:20,0:20:34.14:0,34,220	0/0:22,0:22:48.42:0,48,327	0/0:18,0:18:25.46:0,25,196	0/0:14,0:14:21.56:0,22,175	1/1:17,0:17:41.20:344,41,0	1/1:25,0:25:67.88:525,68,0	1/1:12,0:11:23.88:194,24,0	1/1:17,3:20:55.80:464,56,0	1/1:14,0:14:38.64:314,39,0	1/1:10,0:10:26.68:191,27,0	0/0:26,0:26:17.16:0,17,193	1/1:15,0:15:44.42:368,44,0	1/1:28,2:30:67.72:551,68,0	0/0:7,0:7:11.53:0,12,90
chr10	95481308	.	TG	T	7192.12	PASS	AB=0.982;AC=37;AF=0.661;AN=56;BaseQRankSum=-2.516;DP=542;FS=4.085;HRun=1;HaplotypeScore=118.6546;InbreedingCoeff=0.3508;MQ=57.61;MQ0=8;MQRankSum=-0.698;QD=15.98;ReadPosRankSum=0.043;VQSLOD=4.9024;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,1:21:25.78:26,0,107	0/0:6,0:6:8.16:0,8,44	0/1:29,3:14:38.43:38,0,112	0/0:23,1:12:2.13:0,2,30	0/1:32,0:32:72.25:72,0,76	1/1:11,13:23:65.66:693,66,0	1/1:5,5:10:27.01:278,27,0	0/1:33,0:33:43.85:44,0,259	0/0:16,0:16:11.20:0,11,147	1/1:10,14:24:62.91:671,63,0	1/1:13,10:23:59.85:551,60,0	1/1:9,7:15:38.39:393,38,0	1/1:6,6:12:33:340,33,0	1/1:17,4:20:47.81:442,48,0	0/1:20,0:20:37.06:37,0,53	0/0:22,0:22:0.21:0,0,101	0/0:17,0:17:21.32:0,21,127	0/1:14,0:14:2.80:3,0,74	1/1:12,4:16:42.86:406,43,0	1/1:14,10:24:68.03:661,68,0	1/1:7,3:10:26.93:254,27,0	1/1:12,8:20:55.56:547,56,0	1/1:11,4:15:38.53:395,39,0	1/1:7,3:10:26.82:225,27,0	0/1:26,0:26:16.15:31,0,16	1/1:11,5:16:44.57:430,45,0	1/1:22,8:30:70.45:654,70,0	0/0:7,0:7:5.43:0,5,50
chr10	95481309	.	GT	G	2006.69	PASS	AB=0.940;AC=38;AF=0.679;AN=56;BaseQRankSum=0.569;DP=545;FS=3.109;HRun=13;HaplotypeScore=136.9278;InbreedingCoeff=0.1188;MQ=56.37;MQ0=8;MQRankSum=-2.741;QD=4.29;ReadPosRankSum=4.669;VQSLOD=1.5238;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:16.20:0,16,86	1/1:5,1:6:6.70:30,7,0	0/1:32,0:14:17.95:18,0,30	0/0:22,0:11:6.38:0,6,40	1/1:23,9:32:20.40:217,20,0	1/1:24,0:23:24.91:183,25,0	1/1:12,0:12:0.51:67,1,0	0/1:25,7:32:74.45:83,0,74	0/1:15,1:16:26.77:27,0,28	1/1:24,0:24:32.51:178,33,0	1/1:24,0:24:10.77:75,11,0	0/1:17,0:16:20.50:74,0,20	1/1:13,0:13:14.29:82,14,0	1/1:20,0:19:6.88:62,7,0	1/1:15,5:20:27.20:143,27,0	0/1:15,7:22:3.28:129,0,3	0/0:15,0:17:18.17:0,18,87	0/0:9,0:14:27.69:0,28,145	0/1:16,0:16:3.42:58,0,3	1/1:24,0:24:0.55:131,1,0	1/1:10,0:10:4.12:40,4,0	0/1:19,0:19:2.54:112,0,3	1/1:15,0:15:8.62:99,9,0	0/1:10,0:10:6.46:13,0,6	1/1:17,10:27:21.40:183,21,0	1/1:16,0:16:6.05:72,6,0	0/1:30,0:30:29.32:82,0,29	0/1:6,1:7:15.01:15,0,24
chr10	95481314	.	T	TTTTTTTG	1026.42	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-0.095;DP=549;FS=25.873;HRun=0;HaplotypeScore=196.6254;InbreedingCoeff=-0.0775;MQ=55.70;MQ0=9;MQRankSum=-3.174;QD=4.01;ReadPosRankSum=-1.119;VQSLOD=1.2040;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:26:21.76:710,22,0	0/1:7,0:7:2.89:24,0,3	0/0:33,0:13:17.91:0,18,143	0/1:24,0:12:2.39:2,0,12	0/1:33,0:33:31.53:32,0,67	0/0:23,0:22:15.26:0,15,478	0/0:11,0:11:20.51:0,21,242	0/1:30,0:30:40.75:68,0,41	0/0:16,0:16:3.18:0,3,69	0/1:24,0:24:1.24:1,0,299	0/0:22,0:22:12.86:0,13,210	0/0:17,0:16:29.75:0,30,283	0/0:13,0:13:20.81:0,21,214	0/0:18,0:17:27.01:0,27,249	0/1:19,0:19:42.71:43,0,57	0/1:22,0:22:47.31:47,0,90	0/1:19,0:19:71.51:132,0,72	0/1:14,0:14:10.01:10,0,145	0/0:16,0:16:4.73:0,5,89	0/0:23,0:23:44.17:0,44,462	0/0:11,0:11:0.74:0,1,115	0/0:18,0:18:40.06:0,40,433	0/0:16,0:16:24.39:0,24,266	0/0:10,0:10:13.77:0,14,161	0/1:28,0:28:42.07:69,0,42	0/0:15,0:15:0.20:0,0,188	0/0:31,0:31:22.84:0,23,390	0/1:9,0:9:17.61:35,0,18
chr10	95481318	.	T	TTTTG	3820.81	PASS	AB=0.943;AC=29;AF=0.518;AN=56;BaseQRankSum=-4.725;DP=551;FS=62.153;HRun=0;HaplotypeScore=157.3140;InbreedingCoeff=-0.4274;MQ=55.00;MQ0=8;MQRankSum=-0.742;QD=8.11;ReadPosRankSum=-3.185;VQSLOD=0.4800;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:27:46.44:134,0,46	1/1:2,5:7:14.22:240,14,0	0/0:30,0:10:18.92:0,19,186	0/0:21,0:11:4.82:0,5,44	1/1:15,18:35:51.69:636,52,0	0/1:22,0:21:54.15:54,0,149	0/0:11,0:11:6:0,6,73	1/1:15,9:30:3.04:438,3,0	0/1:6,6:15:44.45:65,0,44	0/1:26,0:26:62.04:62,0,90	0/1:19,0:19:49.21:106,0,49	0/1:19,0:18:24.48:24,0,128	0/1:16,0:16:37.73:38,0,56	0/0:18,0:17:15.24:0,15,166	1/1:11,10:22:11.73:436,12,0	0/1:13,9:23:30.37:393,0,30	0/1:17,0:17:29.55:126,0,30	0/1:14,0:14:62.60:96,0,63	0/1:16,0:16:25.62:71,0,26	0/1:22,0:22:56.81:57,0,127	0/1:12,0:12:14.68:32,0,15	0/1:17,0:17:63.42:63,0,115	0/1:16,0:16:28.69:29,0,95	0/1:11,0:11:15.87:16,0,89	1/1:18,9:29:7.25:449,7,0	0/1:14,0:14:40.47:77,0,40	0/1:31,0:31:78.34:78,0,182	0/1:3,6:10:12.73:99,0,13
chr10	95481323	.	GTT	G	5186.80	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=1.488;DP=527;FS=4.707;HRun=13;HaplotypeScore=131.7854;InbreedingCoeff=0.9647;MQ=56.49;MQ0=4;MQRankSum=-1.970;QD=20.66;ReadPosRankSum=2.592;VQSLOD=3.6596;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:39.11:0,39,580	0/0:8,0:8:13.31:0,13,85	0/0:25,0:9:18.62:0,19,285	0/0:19,0:12:11.26:0,11,101	0/0:29,0:31:50.33:0,50,292	1/1:4,18:21:44.80:513,45,0	1/1:5,4:9:17.98:176,18,0	0/0:28,0:29:57.71:0,58,394	0/0:15,0:15:14.85:0,15,103	1/1:5,21:26:57.08:661,57,0	1/1:4,14:18:33.20:409,33,0	1/1:4,13:16:16.23:239,16,0	1/1:3,12:15:24.06:278,24,0	1/1:6,12:17:17.80:216,18,0	0/0:22,0:24:39.20:0,39,292	0/0:23,0:24:45.61:0,46,327	0/0:7,0:18:14.92:0,15,117	0/0:13,0:14:33.37:0,33,237	1/1:6,7:13:24.03:292,24,0	1/1:3,17:20:48.13:569,48,0	1/1:7,3:10:12:127,12,0	1/1:2,14:16:41.96:477,42,0	1/1:4,12:16:24.06:286,24,0	1/1:3,8:11:8.51:82,9,0	0/0:29,0:29:49.81:0,50,358	1/1:1,13:14:36.08:402,36,0	1/1:6,20:26:24.26:459,24,0	0/0:13,0:13:13.24:0,13,92
chr10	95481325	.	T	TTTTTG	9372.15	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=3.838;DP=543;FS=13.031;HRun=0;HaplotypeScore=180.8127;InbreedingCoeff=0.3120;MQ=59.45;MQ0=4;MQRankSum=-6.017;QD=18.86;ReadPosRankSum=5.904;VQSLOD=3.5591;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:21:68.18:68,0,261	1/1:9,0:9:10.94:177,11,0	0/0:27,0:11:22.81:0,23,360	0/0:19,0:12:8.13:0,8,94	1/1:33,0:33:13.26:632,13,0	1/1:24,0:23:32.96:339,33,0	1/1:7,4:13:12.84:110,13,0	0/1:30,0:30:9.70:460,0,10	0/1:17,0:17:1.17:238,0,1	1/1:25,0:25:59.50:693,60,0	1/1:17,0:17:37.96:537,38,0	1/1:17,0:16:23.19:239,23,0	1/1:15,0:15:19.32:254,19,0	1/1:20,0:19:20.18:154,20,0	1/1:26,0:26:4.42:434,4,0	1/1:27,0:27:23.07:710,23,0	1/1:18,0:18:14.52:277,15,0	0/1:14,0:14:10.88:308,0,11	1/1:15,0:15:27.03:439,27,0	1/1:21,0:21:43.51:486,44,0	1/1:5,5:11:14.88:238,15,0	1/1:14,0:14:39.63:405,40,0	1/1:15,0:15:20.72:227,21,0	0/1:11,0:11:11.52:78,0,12	1/1:28,0:28:42.47:637,42,0	1/1:15,0:15:38.63:497,39,0	1/1:27,0:27:20.34:560,20,0	1/1:13,0:13:9.23:174,9,0
chr10	95484753	.	TA	T	4631.05	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.095;DP=443;FS=7.953;HRun=1;HaplotypeScore=68.4096;InbreedingCoeff=0.5836;MQ=45.83;MQ0=22;MQRankSum=-1.289;QD=12.69;ReadPosRankSum=-0.831;VQSLOD=2.7058;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,1:12:34.24:202,34,0	1/1:9,0:9:20.85:130,21,0	0/0:44,0:7:5.18:0,5,46	0/0:34,0:6:2.04:0,2,6	1/1:27,0:27:58.80:340,59,0	1/1:11,1:12:28.56:173,29,0	1/1:5,0:5:3.89:31,4,0	1/1:26,0:25:66.80:410,67,0	1/1:12,0:12:23.22:133,23,0	1/1:17,0:17:43.05:296,43,0	1/1:14,0:14:31.91:207,32,0	1/1:11,2:13:30.27:195,30,0	1/1:12,0:11:5.49:24,5,0	1/1:11,0:11:26.57:191,27,0	1/1:17,0:14:34.74:211,35,0	1/1:19,0:19:42.83:233,43,0	1/1:2,18:19:2.98:22,3,0	1/1:17,0:17:17.58:109,18,0	1/1:12,1:11:30.89:212,31,0	1/1:19,1:20:49.66:310,50,0	1/1:8,0:8:14.60:91,15,0	1/1:7,0:7:8.14:35,8,0	1/1:12,0:12:28.43:185,28,0	1/1:12,1:12:20.64:140,21,0	1/1:12,0:10:19.50:120,19,0	1/1:14,0:13:29.27:200,29,0	1/1:9,1:10:28.82:173,29,0	1/1:13,0:13:35.14:257,35,0
chr10	95485596	.	A	ACT	1258.03	PASS	AC=30;AF=0.833;AN=36;BaseQRankSum=1.035;DP=75;FS=29.011;HRun=0;HaplotypeScore=15.6062;InbreedingCoeff=0.4772;MQ=93.60;MQ0=4;MQRankSum=-0.693;QD=39.31;ReadPosRankSum=-4.653;VQSLOD=1.2157;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:24.08:0,24,384	./.	0/0:14,0:7:21.07:0,21,327	0/0:17,0:9:21.07:0,21,317	1/1:3,0:3:9.03:167,9,0	./.	1/1:1,0:1:3.01:45,3,0	./.	1/1:2,0:2:6:84,6,0	1/1:0,5:5:15.05:282,15,0	1/1:0,3:3:6.02:113,6,0	./.	1/1:2,0:2:5.99:66,6,0	./.	1/1:1,0:1:3.01:46,3,0	1/1:2,0:2:6.02:105,6,0	1/1:0,4:4:3.01:61,3,0	./.	./.	1/1:0,1:1:3.01:59,3,0	./.	1/1:2,0:2:6.02:121,6,0	1/1:2,0:2:3.01:55,3,0	./.	1/1:0,2:2:6.02:110,6,0	1/1:1,0:1:3.01:46,3,0	1/1:1,0:1:2.99:24,3,0	./.
chr10	95485719	.	G	GGTT	30445.89	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-7.174;DP=578;FS=2.849;HRun=0;HaplotypeScore=115.6020;InbreedingCoeff=0.9937;MQ=79.64;MQ0=0;MQRankSum=-8.535;QD=57.66;ReadPosRankSum=3.477;VQSLOD=6.9183;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:30.10:0,30,499	1/1:2,9:11:33.03:638,33,0	0/0:19,0:19:54.16:0,54,855	0/0:20,0:19:38.73:0,39,620	1/1:5,22:27:69.24:1531,69,0	1/1:3,23:26:69.24:1562,69,0	1/1:1,16:18:48.12:1037,48,0	1/1:7,30:37:93.27:1959,93,0	1/1:0,18:18:51.18:1153,51,0	1/1:4,15:20:57.15:1201,57,0	1/1:1,18:19:57.04:1113,57,0	1/1:2,20:22:63.22:1361,63,0	1/1:5,21:26:63.15:1349,63,0	1/1:4,22:26:69.24:1505,69,0	1/1:2,18:21:60.21:1328,60,0	1/1:1,25:26:75.26:1698,75,0	1/1:2,15:18:42.09:901,42,0	1/1:1,10:11:30.06:631,30,0	1/1:4,12:17:48.15:995,48,0	1/1:5,20:26:72:1431,72,0	1/1:0,6:6:15.05:311,15,0	1/1:1,10:11:30.03:629,30,0	1/1:2,18:21:54.08:1170,54,0	1/1:1,13:17:38.97:822,39,0	1/1:1,22:23:63.13:1375,63,0	1/1:2,15:18:51.17:1131,51,0	1/1:5,37:43:99:2510,111,0	1/1:2,17:19:51.09:1104,51,0
chr10	95485934	.	C	CT	847.24	PASS	AB=0.933;AC=5;AF=0.089;AN=56;BaseQRankSum=-4.723;DP=522;FS=1.477;HRun=9;HaplotypeScore=53.9559;InbreedingCoeff=0.7632;MQ=69.64;MQ0=1;MQRankSum=-0.843;QD=17.29;ReadPosRankSum=1.485;VQSLOD=3.7950;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:56.82:0,57,482	0/0:6,0:6:11.98:0,12,104	0/0:23,0:20:38.07:0,38,289	0/0:9,0:9:13.15:0,13,95	0/0:32,0:32:83.80:0,84,717	0/0:14,0:13:26.97:0,27,234	0/0:13,0:13:29.99:0,30,260	0/0:41,0:41:89.88:0,90,771	0/1:13,1:14:13.53:14,0,134	0/0:25,0:25:59.89:0,60,507	0/0:24,0:24:62.98:0,63,546	0/0:15,0:15:35.95:0,36,306	0/0:20,0:20:53.95:0,54,461	0/0:16,0:16:41.93:0,42,351	0/0:12,0:12:32.99:0,33,286	0/0:22,0:22:56.97:0,57,494	1/1:2,16:18:48.13:531,48,0	1/1:2,15:17:39.11:431,39,0	0/0:23,0:23:53.88:0,54,461	0/0:22,0:22:54.46:0,54,469	0/0:10,0:10:23.99:0,24,206	0/0:8,0:8:17.99:0,18,156	0/0:12,0:12:26.94:0,27,226	0/0:8,0:8:23.98:0,24,205	0/0:23,0:23:59.97:0,60,521	0/0:32,0:32:83.95:0,84,727	0/0:32,1:32:69.12:0,69,708	0/0:9,0:9:23.99:0,24,208
chr10	95486240	.	CTGTGTGTG	C	3783.57	PASS	AB=0.820;AC=30;AF=0.556;AN=54;BaseQRankSum=4.438;DP=735;FS=0.692;HRun=0;HaplotypeScore=194.1800;InbreedingCoeff=0.6090;MQ=62.02;MQ0=14;MQRankSum=-7.042;QD=8.52;ReadPosRankSum=-1.216;VQSLOD=2.3786;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,16:44:7:144,7,0	0/0:7,0:9:15.05:0,15,470	./.	0/0:41,0:28:4.83:0,5,47	0/0:15,0:24:20.47:0,20,673	1/1:9,8:18:5.54:339,6,0	1/1:19,6:26:8.92:165,9,0	0/0:25,0:23:9.76:0,10,59	0/0:23,0:33:48.11:0,48,1542	0/1:22,5:25:51.63:232,0,52	1/1:9,11:19:6.55:111,7,0	0/1:18,5:23:50.46:283,0,50	1/1:15,6:23:21.07:497,21,0	1/1:24,4:28:8.88:173,9,0	0/0:19,0:28:21.07:0,21,752	0/0:21,0:27:24.08:0,24,796	0/0:21,0:31:26.26:0,26,362	0/0:9,0:11:12.03:0,12,304	1/1:19,3:22:9:142,9,0	1/1:19,5:25:9.03:186,9,0	0/1:31,8:37:0:0,0,0	1/1:11,7:19:15.52:348,16,0	1/1:13,9:22:3.01:75,3,0	1/1:19,9:28:6.49:150,6,0	0/0:20,0:22:36.11:0,36,1099	1/1:23,8:30:18.01:344,18,0	1/1:29,8:36:24.08:560,24,0	0/1:8,0:11:8.27:36,0,8
chr10	95487488	.	G	GTA	204.50	PASS	AB=0.823;AC=2;AF=0.036;AN=56;BaseQRankSum=4.512;DP=530;FS=4.612;HRun=0;HaplotypeScore=70.3736;InbreedingCoeff=-0.0372;MQ=66.72;MQ0=0;MQRankSum=-3.110;QD=8.18;ReadPosRankSum=-3.470;VQSLOD=2.3541;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1615	0/0:9,0:9:27.09:0,27,441	0/1:8,5:12:99:256,0,155	0/1:11,1:12:37.63:38,0,234	0/0:31,0:31:93.32:0,93,1508	0/0:19,0:19:54.18:0,54,874	0/0:14,0:14:42.14:0,42,684	0/0:27,0:27:75.25:0,75,1201	0/0:18,0:18:54.18:0,54,881	0/0:22,0:22:66.22:0,66,1063	0/0:16,0:16:48.16:0,48,783	0/0:20,0:20:60.19:0,60,940	0/0:18,0:18:54.16:0,54,853	0/0:18,0:18:54.18:0,54,859	0/0:16,0:16:48.16:0,48,783	0/0:28,0:28:84.29:0,84,1369	0/0:24,0:24:69.24:0,69,1118	0/0:7,0:7:21.07:0,21,343	0/0:23,0:23:69.24:0,69,1126	0/0:19,0:19:54.18:0,54,881	0/0:19,0:19:54.17:0,54,881	0/0:11,0:11:33.11:0,33,531	0/0:16,0:16:45.14:0,45,710	0/0:14,0:14:39.13:0,39,636	0/0:18,0:18:54.18:0,54,881	0/0:20,0:20:60.20:0,60,972	0/0:31,0:31:90.30:0,90,1438	0/0:12,0:12:36.12:0,36,587
chr10	95487764	.	T	TGTGC	3212.69	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-10.590;DP=756;FS=6.766;HRun=0;HaplotypeScore=118.6853;InbreedingCoeff=0.9630;MQ=72.32;MQ0=0;MQRankSum=-2.148;QD=57.37;ReadPosRankSum=2.963;VQSLOD=5.5113;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,132,2233	0/0:5,0:5:12.04:0,12,216	0/0:27,0:26:59:0,59,956	0/0:20,0:20:53.91:0,54,863	0/0:34,0:34:84.26:0,84,1451	0/0:23,0:23:66.21:0,66,1149	0/0:21,0:21:10.76:0,11,945	0/0:26,0:26:66.20:0,66,1107	0/0:31,0:31:87:0,87,1496	0/0:27,0:27:66.22:0,66,1161	0/0:29,0:29:81.25:0,81,1388	0/0:39,0:39:99:0,105,1829	0/0:32,0:32:90.31:0,90,1616	0/0:29,0:29:75.24:0,75,1307	0/0:30,0:30:78.25:0,78,1372	0/0:37,0:37:96.32:0,96,1695	1/1:2,35:38:93.32:2414,93,0	1/1:5,11:18:25.15:920,25,0	0/0:14,0:14:39.12:0,39,663	0/0:26,0:26:63.17:0,63,1097	0/0:33,0:33:93.32:0,93,1660	0/0:23,0:23:60.21:0,60,1077	0/0:25,0:25:72.21:0,72,1206	0/0:27,0:27:66.21:0,66,1154	0/0:16,0:16:39.12:0,39,671	0/0:37,0:37:99:0,99,1779	0/0:31,0:31:90.29:0,90,1586	0/0:9,0:9:27.07:0,27,453
chr10	95488570	.	TC	T	364.09	PASS	AB=0.667;AC=3;AF=0.058;AN=52;BaseQRankSum=-0.353;DP=638;FS=4.024;HRun=3;HaplotypeScore=120.8842;InbreedingCoeff=0.3427;MQ=31.52;MQ0=112;MQRankSum=2.305;QD=6.87;ReadPosRankSum=0.946;VQSLOD=0.7243;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:19:45.15:0,45,646	0/0:14,0:12:33.11:0,33,475	./.	./.	0/0:30,0:28:57.19:0,57,820	0/0:19,0:16:33.06:0,33,325	0/0:22,0:17:36.07:0,36,356	0/0:34,0:25:72.16:0,72,989	0/0:25,0:20:48.15:0,48,673	0/0:21,0:17:45.01:0,45,405	0/0:28,0:25:42.09:0,42,425	0/0:25,0:22:36.06:0,36,352	0/0:20,0:17:24.05:0,24,238	0/0:23,0:18:27.05:0,27,270	0/0:33,0:26:54.18:0,54,776	0/0:35,0:34:90.18:0,90,1224	0/1:16,16:18:19:236,0,19	1/1:9,12:11:0.97:217,1,0	0/0:16,0:12:29.97:0,30,279	0/0:30,0:29:45.08:0,45,441	0/0:23,0:8:15.03:0,15,147	0/0:17,0:15:30.06:0,30,297	0/0:21,0:18:18.04:0,18,179	0/0:12,0:5:3.01:0,3,31	0/0:23,0:20:48.12:0,48,667	0/0:24,0:18:48.02:0,48,430	0/0:36,0:31:57.08:0,57,543	0/0:18,0:9:15.05:0,15,215
chr10	95488786	.	TG	T	14414.25	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=14.385;DP=725;FS=9.129;HRun=1;HaplotypeScore=145.0554;InbreedingCoeff=1.0000;MQ=78.31;MQ0=0;MQRankSum=-1.760;QD=37.34;ReadPosRankSum=3.089;VQSLOD=3.3696;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1579	0/0:17,0:17:51.17:0,51,815	0/0:15,0:15:42.61:0,43,673	0/0:23,0:23:69.21:0,69,1064	0/0:38,0:38:99:0,111,1744	1/1:0,23:23:66.22:922,66,0	1/1:0,24:23:60.20:836,60,0	0/0:35,0:35:99:0,105,1609	0/0:15,0:15:42.14:0,42,671	1/1:1,33:34:99:1339,99,0	1/1:0,20:19:54.18:754,54,0	1/1:0,18:18:51.17:710,51,0	1/1:0,42:42:99:1635,117,0	1/1:0,28:28:72.24:1006,72,0	0/0:41,0:41:99:0,120,1818	0/0:30,0:30:87.18:0,87,1267	0/0:29,0:29:87.28:0,87,1365	0/0:24,0:24:72.25:0,72,1146	1/1:0,25:25:75.23:1031,75,0	1/1:0,31:31:84.18:1111,84,0	1/1:0,18:18:48.16:671,48,0	1/1:0,24:24:69.19:942,69,0	1/1:0,22:22:57.15:771,57,0	1/1:0,18:18:48.16:671,48,0	0/0:24,0:24:69.21:0,69,1077	1/1:0,24:23:69.20:925,69,0	1/1:0,35:35:78.26:1089,78,0	0/0:14,0:14:42.13:0,42,647
chr10	95489651	.	G	GTT	9887.02	PASS	AB=0.526;AC=45;AF=0.804;AN=56;BaseQRankSum=-0.635;DP=612;FS=0.000;HRun=10;HaplotypeScore=84.7714;InbreedingCoeff=0.8463;MQ=72.52;MQ0=1;MQRankSum=-1.396;QD=19.12;ReadPosRankSum=-0.074;VQSLOD=3.6978;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:29.27:0,29,532	0/1:1,0:10:7.06:66,0,7	0/0:14,0:13:10.77:0,11,207	0/0:13,0:13:4.61:0,5,83	1/1:4,0:28:61.66:255,62,0	1/1:1,16:19:32.08:420,32,0	1/1:6,9:16:20.28:275,20,0	1/1:7,0:37:73.55:289,74,0	1/1:3,0:22:14.91:119,15,0	1/1:7,20:31:61.74:712,62,0	1/1:1,22:26:68.52:859,69,0	1/1:1,18:22:50.14:669,50,0	1/1:4,13:18:27.08:387,27,0	1/1:3,14:18:35.61:501,36,0	1/1:4,1:29:55.41:229,55,0	1/1:2,1:23:52.92:221,53,0	0/0:28,0:29:62.82:0,63,686	0/0:17,0:17:45.04:0,45,447	1/1:7,15:27:55.60:668,56,0	1/1:7,14:23:47.49:564,47,0	1/1:0,9:11:23.05:286,23,0	1/1:1,11:15:36.11:503,36,0	1/1:3,14:19:36.34:467,36,0	1/1:3,7:10:15.01:199,15,0	1/1:4,1:23:45.43:194,45,0	1/1:4,21:32:51.64:907,52,0	1/1:4,28:37:73.19:959,73,0	1/1:5,1:20:10.91:138,11,0
chr10	95490032	.	TTGTGTGTGTGTGTGTGTG	T	1789.90	PASS	AB=0.896;AC=18;AF=0.391;AN=46;BaseQRankSum=-0.083;DP=523;FS=4.072;HRun=0;HaplotypeScore=227.6938;InbreedingCoeff=0.6241;MQ=56.29;MQ0=18;MQRankSum=-1.089;QD=10.41;ReadPosRankSum=1.434;VQSLOD=2.3204;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:18.04:0,18,897	0/0:11,0:11:8.85:0,9,284	./.	0/0:15,0:5:6.02:0,6,105	0/0:28,0:27:33.58:0,34,2380	1/1:12,0:13:9.02:166,9,0	1/1:15,1:15:6.01:74,6,0	0/0:26,0:25:26.68:0,27,867	0/0:23,0:23:32.67:0,33,2077	1/1:13,1:18:17.98:399,18,0	./.	1/1:17,0:17:15.19:420,15,0	0/0:16,0:16:6.02:0,6,153	0/1:8,1:10:18.98:19,0,74	0/0:35,0:35:46.08:0,46,2762	0/0:31,0:31:55.06:0,55,3370	0/0:20,0:20:14.99:0,15,569	0/0:13,0:10:12.03:0,12,481	1/1:13,1:13:3.01:141,3,0	1/1:12,0:13:12.04:280,12,0	1/1:29,0:25:6.02:113,6,0	./.	./.	0/0:12,1:14:2.84:0,3,59	0/0:40,0:39:54.19:0,54,3751	1/1:16,0:15:6.02:122,6,0	0/1:22,0:23:37.82:225,0,38	./.
chr10	95490105	.	A	AATGTAT	2036.13	PASS	AB=0.978;AC=20;AF=0.357;AN=56;BaseQRankSum=4.263;DP=501;FS=2.072;HRun=0;HaplotypeScore=142.0691;InbreedingCoeff=0.2308;MQ=40.45;MQ0=46;MQRankSum=-2.356;QD=8.28;ReadPosRankSum=-5.147;VQSLOD=0.8633;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:23.35:0,23,415	0/0:5,0:5:11.71:0,12,271	0/0:19,0:2:6.02:0,6,95	0/0:21,0:4:11.89:0,12,144	0/0:26,0:24:33.95:0,34,568	1/1:15,0:13:3.01:90,3,0	1/1:14,2:10:3.01:85,3,0	0/0:29,0:26:2.08:0,2,386	0/0:16,0:16:30.50:0,30,683	0/1:16,0:15:99:265,0,149	1/1:15,0:16:14.60:341,15,0	0/1:15,3:14:2.10:334,0,2	0/1:14,0:11:45.79:81,0,46	0/1:15,0:13:30.15:83,0,30	0/0:25,0:24:43.66:0,44,758	0/0:27,0:27:56.42:0,56,1039	0/1:15,0:15:76.02:76,0,172	0/0:6,0:6:9.85:0,10,115	0/0:9,0:6:14.02:0,14,120	0/1:28,0:26:43.84:44,0,72	0/1:24,0:19:10.45:174,0,10	1/1:6,2:8:3.01:80,3,0	1/1:17,5:15:14.81:542,15,0	1/1:7,0:7:0.47:1,0,0	0/0:19,0:18:31.82:0,32,389	0/0:17,0:15:10.93:0,11,134	0/1:30,0:30:8.08:8,0,74	0/0:19,0:15:37.71:0,38,691
chr10	95490107	.	A	AATGTATGT	5232.42	PASS	AB=0.979;AC=32;AF=0.640;AN=50;BaseQRankSum=4.322;DP=474;FS=0.000;HRun=0;HaplotypeScore=123.4145;InbreedingCoeff=0.6629;MQ=42.74;MQ0=46;MQRankSum=-6.691;QD=19.67;ReadPosRankSum=-3.591;VQSLOD=3.2232;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:17:31.47:31,0,330	0/0:5,0:5:11.87:0,12,297	./.	./.	0/0:24,0:22:2.91:0,3,490	1/1:7,5:15:6.02:216,6,0	1/1:12,0:8:6:127,6,0	0/0:33,0:29:21.04:0,21,299	0/0:15,0:15:30.02:0,30,739	1/1:11,0:11:21.04:618,21,0	1/1:9,5:17:23.80:733,24,0	1/1:16,1:12:24.07:741,24,0	1/1:9,6:14:6.02:216,6,0	1/1:9,2:13:9.03:319,9,0	0/0:22,0:21:29.76:0,30,689	0/0:26,0:26:44.64:0,45,1029	1/1:13,2:18:9:257,9,0	./.	1/1:11,0:11:9:113,9,0	0/1:22,0:22:53.55:121,0,54	1/1:21,0:16:32.94:360,33,0	1/1:7,0:5:6.02:202,6,0	1/1:16,3:14:27.07:797,27,0	1/1:4,1:7:0.47:1,0,0	0/0:18,0:17:9.02:0,9,170	1/1:4,0:8:20.74:155,21,0	1/1:10,0:27:23.51:226,24,0	0/0:17,0:15:39.10:0,39,767
chr10	95491742	.	TGGTCTACATAGCAA	T	12684.69	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.209;DP=639;FS=12.914;HRun=0;HaplotypeScore=260.0291;InbreedingCoeff=0.9917;MQ=67.86;MQ0=0;MQRankSum=-13.107;QD=88.70;ReadPosRankSum=0.683;VQSLOD=3.0313;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,9379	1/1:3,5:8:23.99:699,24,0	0/0:25,0:25:71.27:0,71,4050	0/0:23,0:21:24.90:0,25,2737	1/1:1,11:12:20.70:468,21,0	0/0:28,0:28:81.28:0,81,5496	0/0:19,0:19:57.19:0,57,3341	1/1:2,29:31:86.94:2316,87,0	1/1:1,17:18:39.13:1685,39,0	0/0:24,0:24:69.23:0,69,4551	0/0:23,0:23:66.23:0,66,4309	0/0:33,0:33:99:0,99,6280	0/0:31,0:31:93.29:0,93,6118	0/0:34,0:34:99:0,102,6344	1/1:0,30:30:78.22:3190,78,0	1/1:0,23:23:57.20:2397,57,0	0/0:26,0:26:75.20:0,75,4585	0/0:6,0:6:18.06:0,18,1281	0/0:16,0:16:47.16:0,47,2343	0/0:14,0:14:36.12:0,36,2463	0/0:32,0:32:93.29:0,93,6194	0/0:9,0:9:24.05:0,24,1331	0/0:21,0:21:60.16:0,60,3258	0/0:28,0:28:84.26:0,84,5572	1/1:0,17:17:39.05:1410,39,0	0/0:24,0:24:69.24:0,69,4667	0/0:33,0:33:99:0,99,6605	1/1:0,4:4:12.04:519,12,0
chr10	95491805	.	TCCCCCCTAG	T	8056.96	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.009;DP=551;FS=2.650;HRun=0;HaplotypeScore=198.1069;InbreedingCoeff=0.9873;MQ=77.32;MQ0=1;MQRankSum=-14.311;QD=57.96;ReadPosRankSum=-0.022;VQSLOD=4.8528;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,108,4724	1/1:0,10:10:27.09:789,27,0	0/0:22,0:22:59.86:0,60,1839	0/0:20,0:17:42.14:0,42,1335	1/1:6,18:24:39.13:1109,39,0	0/0:34,0:34:93.30:0,93,4152	0/0:18,0:18:48.15:0,48,1991	1/1:8,18:26:54.16:1455,54,0	1/1:3,8:11:24.08:701,24,0	0/0:20,0:20:51.18:0,51,2337	0/0:22,0:22:60.21:0,60,2666	0/0:29,0:29:81.26:0,81,3563	0/0:27,0:27:78.25:0,78,3414	0/0:27,0:27:78.27:0,78,3637	1/1:5,17:22:51.18:1481,51,0	1/1:8,15:23:45.15:1295,45,0	0/0:27,0:27:78.25:0,78,3545	0/0:10,0:10:24.08:0,24,1024	0/0:9,0:9:24.08:0,24,1125	0/0:15,0:15:45.13:0,45,1887	0/0:16,0:16:42.14:0,42,1886	0/0:3,0:3:9.03:0,9,424	0/0:13,0:13:39.13:0,39,1665	0/0:26,0:26:78.27:0,78,3369	1/1:7,8:15:24.08:701,24,0	0/0:10,0:10:30.10:0,30,1366	0/0:24,0:24:63.22:0,63,2904	1/1:1,7:8:18.06:526,18,0
chr10	95492003	.	G	GGTGTGT	6486.16	PASS	AB=1.000;AC=50;AF=0.926;AN=54;BaseQRankSum=-2.637;DP=506;FS=0.000;HRun=0;HaplotypeScore=125.7194;InbreedingCoeff=0.1121;MQ=67.96;MQ0=10;MQRankSum=-1.072;QD=14.01;ReadPosRankSum=0.800;VQSLOD=3.5997;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:17.97:389,18,0	1/1:6,0:6:3.01:48,3,0	0/1:22,0:17:0:0,0,0	./.	0/0:6,6:15:0.47:0,0,1	1/1:16,7:25:14.58:368,15,0	1/1:20,0:19:17.22:324,17,0	1/1:16,0:16:3:27,3,0	0/1:11,0:11:42.64:298,0,43	1/1:29,0:28:33.04:590,33,0	1/1:9,0:14:1.29:60,1,0	1/1:15,0:14:12.04:334,12,0	1/1:11,8:19:11.49:314,11,0	1/1:18,0:18:15.04:335,15,0	1/1:8,7:19:8.17:230,8,0	1/1:4,6:10:9.03:257,9,0	1/1:12,0:30:5.75:108,6,0	1/1:6,0:13:2.16:37,2,0	1/1:22,0:22:15.05:253,15,0	1/1:16,0:15:12.04:263,12,0	1/1:18,0:15:9.01:159,9,0	1/1:12,0:11:6.02:86,6,0	1/1:14,0:14:5.94:86,6,0	1/1:18,0:18:21.07:485,21,0	1/1:20,0:20:0.35:325,0,0	1/1:22,0:22:33.06:607,33,0	1/1:12,0:11:14.98:364,15,0	1/1:17,0:15:12.01:139,12,0
chr10	95492487	.	AT	A	5218.98	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=7.641;DP=611;FS=11.861;HRun=12;HaplotypeScore=71.0714;InbreedingCoeff=0.9293;MQ=62.66;MQ0=3;MQRankSum=-0.511;QD=15.67;ReadPosRankSum=2.118;VQSLOD=5.1513;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:32:76.77:0,77,388	0/0:8,0:8:21.04:0,21,208	0/0:26,0:13:23.81:0,24,195	0/0:16,0:8:2.65:0,3,53	0/0:27,2:29:25.62:0,26,608	1/1:4,29:33:74.67:580,75,0	1/1:7,13:20:37.87:284,38,0	0/0:40,1:41:51.90:0,52,702	0/0:21,0:22:19.16:0,19,372	1/1:10,19:30:58.79:447,59,0	1/1:3,18:21:56.78:441,57,0	1/1:2,20:23:55.81:424,56,0	1/1:9,16:25:10.42:270,10,0	1/1:6,9:16:28.91:215,29,0	0/0:24,1:25:33.87:0,34,520	0/0:24,0:24:60.12:0,60,609	0/0:21,0:21:56.28:0,56,540	0/0:10,1:11:3.82:0,4,220	1/1:4,18:23:49.83:377,50,0	1/1:7,11:20:6.48:213,6,0	1/1:3,17:20:35.84:279,36,0	1/1:4,8:12:23.90:186,24,0	1/1:2,15:18:38.75:302,39,0	1/1:0,16:16:38.85:302,39,0	0/0:16,1:17:21.83:0,22,390	1/1:6,14:21:40.83:308,41,0	1/1:7,28:34:78.61:592,79,0	0/0:5,0:5:15.03:0,15,152
chr10	95492655	.	C	CT	4647.60	PASS	AB=0.731;AC=32;AF=0.571;AN=56;BaseQRankSum=-5.913;DP=522;FS=3.781;HRun=12;HaplotypeScore=56.8435;InbreedingCoeff=0.3806;MQ=65.05;MQ0=3;MQRankSum=1.588;QD=12.80;ReadPosRankSum=2.289;VQSLOD=4.9766;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:35.76:0,36,262	0/1:3,1:4:20.23:20,0,35	0/0:29,0:11:16.85:0,17,122	0/1:16,0:12:16.29:16,0,26	0/0:20,0:22:30.48:0,30,334	0/1:8,12:20:1.74:308,0,2	0/1:8,6:14:22.77:99,0,23	0/0:28,1:29:9.46:0,9,232	0/0:16,0:17:33.36:0,33,228	0/1:7,10:17:32.78:179,0,33	1/1:8,16:24:19.63:493,20,0	0/1:4,11:15:13.77:204,0,14	1/1:4,12:17:26.42:230,26,0	1/1:14,5:20:23.33:283,23,0	0/0:15,1:17:8.62:0,9,216	0/0:21,1:23:19.62:0,20,288	1/1:6,3:26:26.53:175,27,0	1/1:2,0:11:11.36:57,11,0	1/1:8,8:18:26.72:233,27,0	1/1:7,32:41:10.71:765,11,0	1/1:2,10:12:24.04:234,24,0	1/1:3,8:12:23.87:219,24,0	1/1:5,12:16:30.05:292,30,0	1/1:3,3:6:9.01:88,9,0	0/1:8,1:10:29.82:30,0,92	0/1:11,23:35:28.38:431,0,28	1/1:6,16:25:2.66:294,3,0	0/0:6,0:6:10.98:0,11,72
chr10	95496014	.	A	AT	3583.80	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-6.141;DP=547;FS=1.717;HRun=11;HaplotypeScore=61.9214;InbreedingCoeff=0.9475;MQ=76.89;MQ0=2;MQRankSum=0.912;QD=18.86;ReadPosRankSum=0.249;VQSLOD=4.6542;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:62.75:0,63,485	1/1:0,9:9:24.05:244,24,0	0/0:27,0:16:7.98:0,8,110	0/0:22,0:18:17.64:0,18,115	1/1:3,33:36:74.69:904,75,0	0/0:30,0:30:74.66:0,75,578	0/0:10,0:10:26.90:0,27,209	1/1:9,17:26:10.64:471,11,0	1/1:1,17:18:39.08:396,39,0	0/0:21,0:21:41.78:0,42,325	0/0:18,0:18:38.84:0,39,302	0/0:16,0:16:38.84:0,39,302	0/0:15,0:16:34.90:0,35,261	0/0:14,0:14:26.18:0,26,208	1/1:1,19:20:48.10:487,48,0	1/1:6,19:25:27.25:420,27,0	1/1:4,0:31:53.97:273,54,0	1/1:0,0:5:11.36:57,11,0	0/0:14,0:14:30.60:0,31,252	0/0:27,0:27:56.74:0,57,441	0/0:11,0:12:31.92:0,32,238	0/0:22,0:22:44.78:0,45,348	0/0:17,0:17:41.82:0,42,325	0/0:12,0:12:32.87:0,33,255	1/1:4,11:15:3.78:210,4,0	0/0:29,0:31:70.71:0,71,538	0/0:24,0:24:37.95:0,38,414	1/1:0,5:5:12.02:122,12,0
chr10	95496062	.	CCT	C	1147.83	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.849;DP=537;FS=16.858;HRun=0;HaplotypeScore=68.7526;InbreedingCoeff=0.9867;MQ=88.61;MQ0=0;MQRankSum=-3.794;QD=37.03;ReadPosRankSum=-1.427;VQSLOD=3.5843;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:78.22:1243,78,0	0/0:7,0:7:21.07:0,21,389	0/0:18,0:18:51.13:0,51,961	0/0:22,0:21:60.04:0,60,1186	0/0:26,0:26:78.27:0,78,1558	0/0:19,0:19:57.20:0,57,1157	0/0:13,0:13:39.12:0,39,757	0/0:29,0:29:87.29:0,87,1701	0/0:21,0:21:63.20:0,63,1243	0/0:19,0:19:57.20:0,57,1158	0/0:19,0:19:57.20:0,57,1129	0/0:18,0:18:54.19:0,54,1097	0/0:17,0:17:51.18:0,51,1035	0/0:11,0:11:33.11:0,33,671	0/0:23,0:23:62.98:0,63,1250	0/0:24,0:24:60.21:0,60,1219	0/0:33,0:33:90.29:0,90,1755	0/0:13,0:13:39.13:0,39,791	0/0:18,0:18:54.18:0,54,1036	0/0:19,0:19:57.20:0,57,1141	0/0:17,0:17:48.16:0,48,974	0/0:14,0:14:42.12:0,42,768	0/0:14,0:14:39.13:0,39,792	0/0:19,0:19:54.19:0,54,1097	0/0:9,0:9:27.09:0,27,546	0/0:31,0:31:93.32:0,93,1890	0/0:27,0:26:81.27:0,81,1611	0/0:6,0:6:18.06:0,18,366
chr10	95497035	.	C	CT	331.12	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-2.906;DP=465;FS=0.000;HRun=9;HaplotypeScore=52.9324;InbreedingCoeff=0.7231;MQ=68.49;MQ0=0;MQRankSum=0.683;QD=13.80;ReadPosRankSum=1.439;VQSLOD=3.1926;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:62.97:0,63,543	0/0:10,0:10:26.99:0,27,234	0/1:5,0:6:3.50:3,0,67	0/0:6,0:6:0.87:0,1,45	0/0:32,0:32:83.95:0,84,724	0/0:18,0:18:53.99:0,54,469	0/0:10,0:10:26.99:0,27,234	0/0:35,0:35:89.92:0,90,771	0/0:13,0:13:29.99:0,30,260	0/0:26,0:26:77.98:0,78,674	0/0:25,0:25:65.91:0,66,564	0/0:14,0:15:44.01:0,44,366	0/0:10,0:10:26.99:0,27,234	0/0:17,0:17:41.96:0,42,360	0/0:20,0:19:50.98:0,51,443	0/0:18,0:18:50.97:0,51,439	1/1:2,11:13:32.83:344,33,0	1/1:1,4:5:9.02:100,9,0	0/0:22,0:22:30.73:0,31,393	0/0:21,0:21:56.98:0,57,495	0/0:8,0:8:20.99:0,21,182	0/0:12,0:12:35.99:0,36,312	0/0:11,0:11:29.98:0,30,256	0/0:9,0:9:26.99:0,27,234	0/0:22,0:22:53.97:0,54,469	0/0:20,0:20:53.97:0,54,466	0/0:24,0:24:65.97:0,66,569	0/0:15,0:15:41.98:0,42,365
chr10	95500760	.	GT	G	18082.50	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.736;DP=568;FS=8.070;HRun=2;HaplotypeScore=59.5540;InbreedingCoeff=0.9817;MQ=89.98;MQ0=0;MQRankSum=-7.886;QD=36.53;ReadPosRankSum=3.966;VQSLOD=5.2653;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.28:0,90,1326	1/1:0,5:5:15.05:195,15,0	0/0:17,1:18:15.33:0,15,716	0/0:25,0:25:69.22:0,69,960	1/1:0,18:18:51.17:662,51,0	1/1:0,15:15:45.15:584,45,0	1/1:0,21:21:54.18:701,54,0	1/1:0,32:32:96.30:1232,96,0	1/1:0,25:25:72.23:935,72,0	1/1:0,13:13:39.11:491,39,0	1/1:3,13:16:30.10:389,30,0	1/1:0,26:26:78.25:1012,78,0	1/1:1,22:23:63.20:818,63,0	1/1:0,26:26:72.23:934,72,0	1/1:0,28:28:74.80:973,75,0	1/1:0,22:22:66.21:857,66,0	1/1:1,34:35:99:1285,99,0	1/1:0,21:21:60.20:779,60,0	1/1:0,18:18:54.14:670,54,0	1/1:2,20:22:60.19:779,60,0	1/1:1,31:32:93.30:1207,93,0	1/1:0,12:12:33.11:428,33,0	1/1:0,7:7:21.07:272,21,0	1/1:1,19:20:54.18:701,54,0	1/1:0,12:12:36.12:467,36,0	1/1:0,16:16:48.16:623,48,0	1/1:2,23:25:69.22:895,69,0	1/1:0,5:5:15.05:195,15,0
chr10	95501097	.	T	TTTTG	18957.15	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-15.455;DP=697;FS=2.892;HRun=0;HaplotypeScore=100.1669;InbreedingCoeff=0.9951;MQ=64.36;MQ0=1;MQRankSum=-1.187;QD=43.98;ReadPosRankSum=3.642;VQSLOD=5.4305;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:72.07:0,72,1075	0/0:9,0:9:18.05:0,18,271	0/0:24,0:22:35.18:0,35,560	0/0:11,0:9:18.06:0,18,289	0/0:33,0:33:75.23:0,75,1181	1/1:7,24:32:57.20:1383,57,0	1/1:6,13:19:33.11:802,33,0	0/0:36,0:36:81.25:0,81,1237	0/0:25,0:25:60.17:0,60,932	1/1:10,18:29:54.17:1226,54,0	1/1:4,19:25:60.10:1339,60,0	1/1:7,14:22:39.13:951,39,0	1/1:5,17:22:54.19:1295,54,0	1/1:4,16:21:51.17:1216,51,0	0/0:31,0:31:87.28:0,87,1383	0/0:29,0:29:81.27:0,81,1308	1/1:8,17:26:45.15:1076,45,0	1/1:5,17:22:51.17:1217,51,0	1/1:18,11:27:30.10:732,30,0	1/1:10,15:28:29.20:1021,29,0	1/1:3,8:12:18.06:438,18,0	1/1:6,25:34:72.16:1699,72,0	1/1:10,16:26:45.02:1085,45,0	1/1:6,15:21:39.13:951,39,0	0/0:19,0:19:51.15:0,51,789	1/1:7,17:24:51.12:1137,51,0	1/1:9,27:38:57.19:1390,57,0	0/0:12,0:12:18.06:0,18,296
chr10	95503568	.	TTTC	T	6641.32	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.148;DP=679;FS=1.571;HRun=0;HaplotypeScore=95.0185;InbreedingCoeff=0.9998;MQ=65.50;MQ0=1;MQRankSum=-5.501;QD=43.98;ReadPosRankSum=2.061;VQSLOD=6.2872;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,2534	1/1:1,15:16:45.15:749,45,0	0/0:17,0:14:39.13:0,39,872	0/0:18,0:17:48.15:0,48,1045	1/1:1,20:21:57.19:949,57,0	0/0:25,0:25:75.21:0,75,1650	0/0:21,0:21:57.18:0,57,1239	0/0:35,0:35:96.32:0,96,2025	1/1:2,23:25:60.21:999,60,0	0/0:31,0:31:90.31:0,90,2030	0/0:19,0:19:57.20:0,57,1270	0/0:25,0:25:66.21:0,66,1433	0/0:37,0:37:99:0,108,2420	0/0:20,0:20:60.21:0,60,1360	1/1:4,29:33:87.30:1446,87,0	1/1:0,34:34:90.31:1499,90,0	0/0:19,0:19:57.20:0,57,1287	0/0:18,0:18:54.19:0,54,1224	0/0:26,0:26:75.26:0,75,1698	0/0:23,0:23:69.24:0,69,1564	0/0:19,0:19:48.16:0,48,1054	0/0:24,0:24:66.23:0,66,1469	0/0:20,0:20:54.19:0,54,1222	0/0:21,0:21:60.21:0,60,1359	1/1:0,22:22:60.21:999,60,0	0/0:25,0:25:75.26:0,75,1699	0/0:36,0:36:99:0,105,2377	0/0:9,0:9:27.06:0,27,487
chr10	95504786	.	CAA	C	15078.63	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=15.378;DP=608;FS=3.586;HRun=3;HaplotypeScore=75.2359;InbreedingCoeff=0.9993;MQ=81.03;MQ0=1;MQRankSum=-1.144;QD=40.21;ReadPosRankSum=4.827;VQSLOD=4.5152;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,2028	0/0:15,0:15:45.10:0,45,793	0/0:15,0:15:42.04:0,42,763	0/0:16,0:16:21.30:0,21,693	0/0:26,0:26:78.27:0,78,1506	1/1:0,23:23:54.18:826,54,0	1/1:1,14:15:36.12:543,36,0	0/0:27,0:27:75.23:0,75,1332	0/0:18,0:18:54.15:0,54,977	1/1:0,33:33:99:1474,99,0	1/1:1,20:20:45.15:688,45,0	1/1:0,20:20:51.17:780,51,0	1/1:0,18:18:42.14:641,42,0	1/1:0,23:23:57.19:872,57,0	0/0:26,0:26:78.26:0,78,1476	0/0:23,0:23:66.21:0,66,1213	1/1:1,29:30:81.27:1239,81,0	1/1:0,15:15:42.14:642,42,0	1/1:1,16:17:48.10:648,48,0	1/1:0,23:23:63.21:964,63,0	1/1:1,18:19:54.18:826,54,0	1/1:0,15:15:42.14:641,42,0	1/1:0,19:19:51.17:780,51,0	1/1:0,25:25:69.23:1055,69,0	0/0:23,0:23:69.23:0,69,1298	1/1:0,33:33:99:1495,99,0	1/1:1,25:26:63.21:963,63,0	0/0:9,0:9:27.09:0,27,521
chr10	95505303	.	GGA	G	13189.19	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=3.496;DP=618;FS=13.953;HRun=0;HaplotypeScore=92.4999;InbreedingCoeff=0.8990;MQ=70.42;MQ0=5;MQRankSum=-2.942;QD=25.96;ReadPosRankSum=5.633;VQSLOD=5.2095;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:29:16.32:0,16,1055	1/1:0,4:4:9.03:111,9,0	0/0:38,1:32:3.20:0,3,535	0/0:41,1:35:20.78:0,21,668	1/1:6,10:16:36.10:430,36,0	1/1:2,12:14:33.10:409,33,0	1/1:4,16:20:36.03:425,36,0	1/1:9,21:30:62.99:720,63,0	1/1:4,26:32:77.91:919,78,0	1/1:7,13:21:41.92:468,42,0	1/1:8,10:18:20.95:239,21,0	1/1:2,22:24:63.20:780,63,0	1/1:2,21:23:54.17:669,54,0	1/1:1,19:21:47.98:571,48,0	1/1:4,28:32:78.25:966,78,0	1/1:7,24:31:69.05:831,69,0	1/1:4,16:20:36.11:446,36,0	1/1:4,10:14:18.06:223,18,0	1/1:7,12:18:36.08:419,36,0	1/1:2,14:16:39.08:466,39,0	1/1:3,19:22:50.95:607,51,0	1/1:0,10:11:26.91:311,27,0	1/1:2,10:12:27.08:334,27,0	1/1:4,25:28:62.80:779,63,0	1/1:3,13:16:30.09:372,30,0	1/1:7,14:21:42.09:492,42,0	1/1:1,32:34:84.10:1017,84,0	1/1:1,5:6:15.05:186,15,0
chr10	95505776	.	TTTTA	T	29467.56	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=5.912;DP=720;FS=0.961;HRun=0;HaplotypeScore=132.1732;InbreedingCoeff=0.9998;MQ=83.74;MQ0=0;MQRankSum=-9.118;QD=45.90;ReadPosRankSum=6.410;VQSLOD=5.3448;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.30:0,87,2249	1/1:1,14:15:39.13:728,39,0	0/0:30,0:30:78.26:0,78,1934	0/0:18,0:18:48.12:0,48,1091	1/1:2,29:31:78.22:1397,78,0	1/1:0,24:24:57.19:1043,57,0	1/1:1,19:20:45.11:762,45,0	1/1:1,26:27:78.20:1333,78,0	1/1:2,30:32:75.26:1400,75,0	1/1:0,29:29:87.30:1595,87,0	1/1:1,23:24:63.17:1137,63,0	1/1:2,23:25:63.22:1176,63,0	1/1:1,22:23:60.21:1098,60,0	1/1:2,19:21:54.18:967,54,0	1/1:2,35:37:81.27:1438,81,0	1/1:0,27:27:63.22:1176,63,0	1/1:2,18:20:45.15:818,45,0	1/1:1,12:13:33.11:599,33,0	1/1:3,19:22:57.20:1037,57,0	1/1:1,33:34:84.25:1529,84,0	1/1:1,29:30:69.24:1268,69,0	1/1:0,35:35:96.29:1747,96,0	1/1:0,30:30:81.28:1491,81,0	1/1:1,18:19:39.13:728,39,0	1/1:0,25:25:66.23:1214,66,0	1/1:0,25:25:72.25:1302,72,0	1/1:0,25:25:60.21:1120,60,0	1/1:2,27:29:75.26:1365,75,0
chr10	95507225	.	CT	C	4875.05	PASS	AB=0.595;AC=49;AF=0.875;AN=56;BaseQRankSum=-1.818;DP=538;FS=13.047;HRun=12;HaplotypeScore=113.0120;InbreedingCoeff=0.3657;MQ=72.65;MQ0=8;MQRankSum=-2.710;QD=10.18;ReadPosRankSum=4.206;VQSLOD=2.6838;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,13:19:17.89:139,18,0	1/1:1,0:7:10.01:29,10,0	0/0:36,1:22:22:0,22,197	0/0:22,0:11:2.50:0,2,61	1/1:3,0:23:36.43:106,36,0	1/1:2,13:17:39.93:290,40,0	0/1:2,12:14:0.36:179,0,0	1/1:12,2:35:43.27:154,43,0	1/1:3,0:19:28.28:82,28,0	1/1:7,11:20:36.76:255,37,0	1/1:7,15:22:38.79:302,39,0	1/1:9,16:25:8.23:237,8,0	1/1:5,17:22:17.32:317,17,0	1/1:5,5:9:14.92:116,15,0	1/1:1,0:16:31.04:93,31,0	1/1:4,1:14:21.30:76,21,0	1/1:6,15:21:19.87:327,20,0	0/1:2,4:6:15.47:78,0,15	0/1:9,11:19:55.49:173,0,55	1/1:2,18:21:34.71:250,35,0	1/1:1,9:10:20.92:162,21,0	1/1:6,5:12:20.34:143,20,0	1/1:4,11:16:3.30:203,3,0	1/1:6,16:22:7.79:324,8,0	1/1:5,0:17:19.90:58,20,0	1/1:12,23:35:6.63:403,7,0	1/1:9,17:26:44.76:348,45,0	1/1:4,1:6:6.26:32,6,0
chr10	95507289	.	CTACCCA	C	1383.66	PASS	AB=0.986;AC=21;AF=0.375;AN=56;BaseQRankSum=12.191;DP=388;FS=55.157;HRun=0;HaplotypeScore=175.4526;InbreedingCoeff=-0.4524;MQ=45.01;MQ0=2;MQRankSum=-10.653;QD=4.69;ReadPosRankSum=7.871;VQSLOD=0.6769;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:33.07:0,33,963	0/1:7,0:7:3.68:4,0,26	0/0:17,0:9:24.08:0,24,635	0/0:13,0:7:18.06:0,18,573	0/1:26,0:26:44.43:61,0,44	0/1:14,2:16:99:262,0,250	0/1:16,0:16:99:155,0,250	0/0:18,0:18:29.60:0,30,386	0/1:23,0:23:23.08:67,0,23	0/1:11,1:12:68.94:69,0,154	0/1:12,0:12:66.06:66,0,202	0/1:15,0:15:26.61:27,0,325	0/1:9,0:9:41.81:42,0,229	0/1:10,0:10:87.29:87,0,172	0/1:18,0:18:40.70:46,0,41	0/1:15,0:15:13.17:13,0,137	0/0:7,0:8:11.48:0,11,198	0/0:1,0:1:3.01:0,3,33	0/1:15,0:13:17.94:18,0,230	0/0:16,0:15:32.90:0,33,412	0/0:7,0:7:12.03:0,12,165	0/1:10,1:11:39.52:40,0,150	0/1:19,0:19:99:127,0,316	0/1:9,0:9:71.97:72,0,95	0/1:24,0:24:4.51:5,0,205	0/1:15,0:15:53.60:54,0,277	0/1:18,0:18:99:256,0,319	1/1:5,0:5:8.67:75,9,0
chr10	95507290	.	TACCCA	T	5015.03	PASS	AB=0.945;AC=26;AF=0.464;AN=56;BaseQRankSum=7.336;DP=384;FS=13.936;HRun=0;HaplotypeScore=154.5896;InbreedingCoeff=-0.2643;MQ=44.70;MQ0=2;MQRankSum=-9.834;QD=15.77;ReadPosRankSum=6.851;VQSLOD=2.5540;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:26.11:0,26,840	0/1:7,0:7:2.73:151,0,3	0/0:17,0:9:24.03:0,24,558	0/0:11,0:7:18.06:0,18,507	1/1:25,1:26:34.41:741,34,0	0/1:12,4:16:78.82:225,0,79	0/1:14,2:16:99:140,0,102	0/1:17,0:17:82.06:171,0,82	1/1:22,0:23:44.29:827,44,0	0/1:11,1:12:69.36:99,0,69	0/1:13,0:13:97.18:105,0,97	0/1:15,0:15:62.61:63,0,113	0/1:8,1:9:33.13:33,0,107	0/1:9,1:10:73.60:96,0,74	1/1:16,1:18:23.14:585,23,0	0/1:15,0:15:30.88:387,0,31	0/1:7,0:7:1.64:2,0,78	0/0:1,0:1:0.47:0,0,1	0/1:13,1:12:62.15:62,0,93	0/0:15,1:15:23.05:0,23,176	0/0:7,0:7:11.91:0,12,89	0/1:11,0:11:54.89:55,0,61	0/1:18,0:18:99:137,0,125	0/1:9,1:10:17.06:69,0,17	0/1:24,0:24:19.04:591,0,19	0/1:13,1:14:68.92:69,0,72	0/1:14,3:18:96.65:237,0,97	1/1:5,0:5:14.91:170,15,0
chr10	95507294	.	CA	C	5829.21	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=6.989;DP=360;FS=7.517;HRun=1;HaplotypeScore=125.3097;InbreedingCoeff=0.7723;MQ=45.63;MQ0=0;MQRankSum=-5.082;QD=18.10;ReadPosRankSum=2.433;VQSLOD=4.8954;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:36.01:0,36,399	1/1:3,4:7:17.99:153,18,0	0/0:11,2:8:24.03:0,24,265	0/0:11,0:7:21.04:0,21,251	1/1:6,19:25:56.91:471,57,0	1/1:12,2:14:35.39:279,35,0	1/1:9,5:14:31.28:284,31,0	1/1:13,5:18:32.66:298,33,0	1/1:6,19:25:55.01:539,55,0	1/1:8,3:11:28.69:225,29,0	1/1:7,4:11:23.67:205,24,0	1/1:11,3:14:28.45:218,28,0	1/1:8,1:9:8.71:49,9,0	1/1:7,3:10:22.16:181,22,0	1/1:5,13:18:48.42:409,48,0	1/1:2,10:12:32.84:276,33,0	1/1:7,1:8:11.11:74,11,0	0/1:3,0:3:7.32:17,0,7	1/1:9,1:10:8.07:137,8,0	1/1:12,2:13:26.90:218,27,0	1/1:5,0:5:6:52,6,0	1/1:7,4:11:20.92:171,21,0	1/1:11,6:17:37.16:271,37,0	1/1:6,3:9:14.99:129,15,0	1/1:5,17:22:56.97:490,57,0	1/1:11,3:14:32.87:274,33,0	1/1:12,4:16:36.30:296,36,0	1/1:2,3:5:14.49:113,14,0
chr10	95507297	.	CCCCCCA	C	6002.80	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=7.301;DP=352;FS=3.830;HRun=0;HaplotypeScore=148.8827;InbreedingCoeff=0.7480;MQ=47.45;MQ0=0;MQRankSum=-6.610;QD=19.81;ReadPosRankSum=5.113;VQSLOD=3.9868;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:27.09:0,27,836	1/1:7,0:7:11.92:127,12,0	0/0:13,0:9:15.05:0,15,441	0/0:9,0:6:15.05:0,15,456	1/1:24,0:24:55.37:567,55,0	1/1:13,0:13:23.89:471,24,0	1/1:12,0:12:18.06:346,18,0	1/1:17,0:17:10.39:177,10,0	1/1:26,0:26:34.51:614,35,0	1/1:11,2:13:14.74:224,15,0	1/1:8,3:11:12.51:212,13,0	1/1:10,3:13:9.03:149,9,0	1/1:8,1:9:6.02:98,6,0	1/1:8,2:10:11.26:226,11,0	1/1:18,0:18:41.94:443,42,0	1/1:13,0:13:11.64:295,12,0	0/0:7,0:7:8.05:0,8,86	0/0:3,0:3:5.96:0,6,43	1/1:7,1:8:6:100,6,0	1/1:14,0:13:2.72:39,3,0	0/0:4,0:4:0.47:0,0,1	1/1:12,1:13:6.33:114,6,0	1/1:15,3:18:21.05:346,21,0	1/1:8,0:8:6.47:129,6,0	1/1:20,0:20:48:503,48,0	1/1:14,0:14:15:249,15,0	1/1:17,0:17:20.75:405,21,0	1/1:5,0:5:15.04:169,15,0
chr10	95507298	.	CCCCCA	C	7871.40	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=7.084;DP=354;FS=1.682;HRun=0;HaplotypeScore=135.4708;InbreedingCoeff=0.5652;MQ=50.59;MQ0=0;MQRankSum=-5.228;QD=25.89;ReadPosRankSum=4.914;VQSLOD=4.6589;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:27.09:0,27,727	1/1:7,0:7:15:249,15,0	0/0:15,0:11:0.98:0,1,417	0/0:10,0:7:18.06:0,18,454	1/1:21,0:24:57.17:1066,57,0	1/1:13,1:14:23.99:315,24,0	1/1:8,4:12:15.21:246,15,0	1/1:14,0:15:23.86:340,24,0	1/1:25,0:26:66.79:1199,67,0	1/1:13,1:14:6.95:171,7,0	1/1:10,1:11:12.51:177,13,0	1/1:13,0:13:9.03:137,9,0	1/1:9,0:9:5.99:67,6,0	1/1:9,1:10:15.03:199,15,0	1/1:16,0:17:45.10:828,45,0	1/1:12,0:13:31.35:601,31,0	0/0:8,0:8:4.19:0,4,42	0/1:3,0:3:0.06:15,0,0	0/1:7,0:7:23.02:79,0,23	1/1:13,1:13:5.67:35,6,0	0/0:4,0:4:0.43:0,0,1	1/1:11,1:12:5.94:88,6,0	1/1:16,2:18:21.01:263,21,0	1/1:7,2:9:5.95:86,6,0	1/1:20,0:20:51.11:944,51,0	1/1:10,2:13:15.01:190,15,0	1/1:15,3:18:19.38:296,19,0	1/1:5,0:5:15.05:279,15,0
chr10	95507299	.	CCCCA	C	5882.49	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=6.614;DP=353;FS=3.806;HRun=0;HaplotypeScore=133.8313;InbreedingCoeff=0.5575;MQ=53.21;MQ0=0;MQRankSum=-5.753;QD=19.10;ReadPosRankSum=4.020;VQSLOD=4.7500;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:27.09:0,27,625	1/1:2,4:6:15:164,15,0	0/0:15,0:12:3.99:0,4,385	0/0:11,0:8:18.04:0,18,383	1/1:5,19:24:56.54:659,57,0	1/1:14,0:14:24.05:282,24,0	1/1:12,0:12:11.88:214,12,0	1/1:9,5:14:22.23:234,22,0	1/1:7,19:26:62.58:749,63,0	1/1:16,0:16:20.39:233,20,0	1/1:11,0:11:12.04:157,12,0	1/1:13,0:13:9.03:121,9,0	1/1:9,0:9:5.91:56,6,0	1/1:10,0:10:15.03:180,15,0	1/1:4,13:17:45.09:532,45,0	1/1:3,10:13:32.71:378,33,0	0/0:8,0:8:3.82:0,4,23	0/1:4,0:4:13.17:14,0,13	0/1:5,0:5:28.12:69,0,28	1/1:11,0:10:5.03:31,5,0	1/1:6,0:6:8.66:76,9,0	1/1:12,0:12:6.05:78,6,0	1/1:18,0:18:23.95:258,24,0	1/1:8,0:8:5.97:78,6,0	1/1:3,17:20:51.09:605,51,0	1/1:15,0:15:20.93:229,21,0	1/1:18,1:19:27.93:298,28,0	1/1:2,3:5:15.05:188,15,0
chr10	95507301	.	CCA	C	5117.34	PASS	AB=0.917;AC=48;AF=0.857;AN=56;BaseQRankSum=5.500;DP=336;FS=2.776;HRun=0;HaplotypeScore=118.6860;InbreedingCoeff=0.5336;MQ=53.80;MQ0=0;MQRankSum=-5.698;QD=16.89;ReadPosRankSum=2.337;VQSLOD=4.9583;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:27.08:0,27,430	1/1:6,0:6:14.97:125,15,0	0/0:12,0:9:3.97:0,4,276	0/0:11,0:8:11.16:0,11,233	1/1:24,0:24:56.60:485,57,0	1/1:12,0:12:26.97:255,27,0	1/1:10,2:12:11.72:177,12,0	1/1:15,0:15:34.48:281,34,0	1/1:24,1:25:71.24:605,71,0	1/1:15,1:16:32.99:305,33,0	1/1:9,0:9:12.01:108,12,0	1/1:10,0:10:8.99:83,9,0	1/1:9,0:9:5.37:36,5,0	1/1:10,0:10:14.59:135,15,0	1/1:17,0:17:44.98:395,45,0	1/1:14,0:14:38.52:330,39,0	1/1:8,0:8:5.75:32,6,0	0/1:4,0:4:14.77:17,0,15	0/1:4,1:5:30.88:62,0,31	1/1:8,1:8:5.92:42,6,0	1/1:6,0:6:11.95:95,12,0	1/1:11,1:12:11.89:108,12,0	1/1:13,1:14:24.02:221,24,0	1/1:8,0:8:12.18:98,12,0	1/1:20,0:20:50.97:449,51,0	1/1:12,1:13:22.92:195,23,0	1/1:18,1:19:38.79:332,39,0	1/1:6,0:6:17.84:145,18,0
chr10	95507302	.	CA	C	4459.31	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=5.641;DP=310;FS=4.092;HRun=1;HaplotypeScore=108.2854;InbreedingCoeff=0.5374;MQ=56.50;MQ0=0;MQRankSum=-6.181;QD=16.10;ReadPosRankSum=2.122;VQSLOD=5.2290;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:27.07:0,27,342	1/1:5,0:5:14.88:106,15,0	0/0:12,0:9:3.97:0,4,249	0/0:10,1:8:11.21:0,11,189	1/1:24,0:24:56.60:409,57,0	1/1:7,5:12:26.59:194,27,0	1/1:10,0:10:19.24:147,19,0	1/1:6,9:15:34.75:284,35,0	1/1:24,1:25:71.63:553,72,0	1/1:15,0:15:32.86:263,33,0	1/1:5,1:6:11.57:81,12,0	1/1:8,0:8:8.93:63,9,0	1/1:5,1:6:4.53:25,5,0	1/1:5,1:6:14.89:106,15,0	1/1:16,0:16:44.73:328,45,0	1/1:14,0:14:40.61:299,41,0	1/1:5,1:6:8.83:58,9,0	0/1:4,0:4:23.08:27,0,23	0/1:7,0:7:31.54:48,0,32	1/1:5,0:5:5.92:41,6,0	1/1:4,0:4:11.95:95,12,0	1/1:9,1:10:11.94:94,12,0	1/1:11,1:13:23.80:172,24,0	1/1:7,1:8:11.89:82,12,0	1/1:18,2:20:50.69:372,51,0	1/1:12,1:13:22.89:177,23,0	1/1:17,2:19:41.19:314,41,0	1/1:6,0:6:17.29:120,17,0
chr10	95509655	.	TTC	T	10455.78	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-4.444;DP=551;FS=41.940;HRun=0;HaplotypeScore=124.3057;InbreedingCoeff=0.4950;MQ=64.69;MQ0=10;MQRankSum=0.487;QD=24.54;ReadPosRankSum=0.871;VQSLOD=3.4655;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:84.19:0,84,1288	0/1:8,0:8:14.96:15,0,24	0/0:31,0:16:26.73:0,27,363	0/0:35,0:17:31.35:0,31,377	0/1:21,0:21:49.85:111,0,50	1/1:6,15:19:60.17:776,60,0	1/1:0,16:16:42.14:574,42,0	1/1:40,0:39:36.37:360,36,0	0/0:12,0:12:11.14:0,11,77	1/1:5,17:21:57.18:763,57,0	1/1:5,15:20:50.76:667,51,0	1/1:3,8:9:24.08:328,24,0	1/1:5,5:9:24.07:314,24,0	1/1:2,12:14:33.06:417,33,0	0/1:14,0:14:35.66:36,0,78	0/1:14,0:14:18.82:22,0,19	1/1:7,15:20:51.10:643,51,0	1/1:6,7:13:33:377,33,0	1/1:8,13:19:50.63:609,51,0	1/1:1,11:12:33.11:451,33,0	1/1:5,7:9:27.05:309,27,0	1/1:6,11:16:45.59:560,46,0	1/1:1,15:15:42.14:574,42,0	1/1:2,10:11:18.03:226,18,0	0/1:23,0:23:62.18:72,0,62	1/1:11,24:34:96.27:1206,96,0	1/1:11,21:31:83.70:1045,84,0	0/0:11,0:11:1.81:0,2,5
chr10	95509659	.	C	CT	1996.60	PASS	AB=0.861;AC=16;AF=0.286;AN=56;BaseQRankSum=-4.295;DP=541;FS=0.000;HRun=1;HaplotypeScore=154.9171;InbreedingCoeff=0.8001;MQ=60.34;MQ0=10;MQRankSum=-0.806;QD=13.31;ReadPosRankSum=-0.249;VQSLOD=2.4583;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.24:0,84,1059	1/1:3,5:8:10.10:146,10,0	0/0:28,0:14:30.08:0,30,369	0/0:34,0:16:19.18:0,19,331	1/1:12,10:23:16.47:330,16,0	0/0:22,0:20:39:0,39,129	0/0:20,0:20:38.58:0,39,152	1/1:25,12:37:44.69:533,45,0	1/1:4,6:11:19.10:249,19,0	0/0:25,0:24:53.37:0,53,224	0/0:19,0:19:42.02:0,42,160	0/0:10,0:9:18.64:0,19,60	0/0:10,0:9:15.78:0,16,51	0/1:13,0:15:0.90:1,0,44	0/1:8,5:13:28.79:140,0,29	1/1:6,8:14:33.52:339,34,0	0/0:22,0:20:16.56:0,17,123	0/0:15,0:15:18.26:0,18,85	0/0:20,0:18:32.74:0,33,109	0/0:12,0:12:25.93:0,26,85	0/0:12,0:9:11.23:0,11,38	0/0:17,0:17:30.27:0,30,105	0/0:15,0:14:32.53:0,33,105	0/0:11,0:11:17.07:0,17,60	1/1:12,11:23:24.78:417,25,0	0/0:33,0:32:55.19:0,55,179	0/0:31,0:30:15.06:0,15,172	1/1:4,1:5:3.01:31,3,0
chr10	95509660	.	TC	T	5751.53	PASS	AB=0.974;AC=47;AF=0.839;AN=56;BaseQRankSum=2.159;DP=547;FS=34.030;HRun=1;HaplotypeScore=142.0324;InbreedingCoeff=0.5715;MQ=59.11;MQ0=10;MQRankSum=-3.699;QD=12.87;ReadPosRankSum=4.301;VQSLOD=2.0169;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:84.14:0,84,1074	1/1:7,0:7:7.98:60,8,0	0/0:30,0:14:29.76:0,30,349	0/0:33,0:15:30.25:0,30,325	1/1:23,0:23:31.97:247,32,0	1/1:22,0:20:58.39:358,58,0	0/1:21,0:21:2.32:182,0,2	1/1:32,5:36:89.21:597,89,0	1/1:10,1:11:18.63:77,19,0	0/1:26,0:25:30.78:254,0,31	1/1:18,1:19:28.18:281,28,0	1/1:11,0:9:23.29:131,23,0	1/1:11,0:10:2.26:123,2,0	1/1:15,0:15:30.01:168,30,0	0/1:11,1:12:0.43:81,0,0	1/1:12,1:13:34.12:171,34,0	1/1:22,0:20:43.81:274,44,0	1/1:15,0:15:4.88:156,5,0	1/1:20,1:19:11.92:302,12,0	1/1:13,0:13:32.02:180,32,0	1/1:12,0:9:26.56:186,27,0	1/1:19,0:18:25.57:286,26,0	1/1:16,0:15:40.77:230,41,0	1/1:12,0:11:12.41:78,12,0	1/1:22,1:23:41.20:249,41,0	1/1:33,1:33:93.94:610,94,0	1/1:29,2:30:39.08:463,39,0	1/1:1,0:1:2.50:9,2,0
chr10	95509687	.	TTC	T	1948.14	PASS	AB=0.926;AC=31;AF=0.554;AN=56;BaseQRankSum=3.156;DP=527;FS=26.616;HRun=0;HaplotypeScore=179.5695;InbreedingCoeff=-0.4973;MQ=47.66;MQ0=9;MQRankSum=-3.674;QD=4.06;ReadPosRankSum=7.731;VQSLOD=1.1487;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,1:37:19.26:118,19,0	0/1:9,0:9:10.95:11,0,44	0/0:24,0:10:8.85:0,9,253	0/0:22,0:8:3.43:0,3,87	0/1:22,1:23:48.98:49,0,63	1/1:20,0:20:28.37:127,28,0	0/1:27,0:27:4.46:86,0,4	0/1:23,0:22:59.72:67,0,60	0/1:17,2:19:41.70:54,0,42	1/1:19,4:23:7.84:206,8,0	0/1:20,2:22:49.25:135,0,49	0/1:12,3:14:16.43:90,0,16	1/1:9,2:11:12.69:85,13,0	0/1:13,3:16:18.97:111,0,19	1/1:12,3:15:3.02:133,3,0	0/1:19,3:22:16.95:156,0,17	0/1:19,2:20:28.53:101,0,29	0/1:15,1:16:26.52:60,0,27	0/1:19,2:19:43.79:75,0,44	0/1:17,0:17:31.53:36,0,32	0/1:9,1:8:14.44:28,0,14	0/1:11,3:14:10.85:97,0,11	0/1:15,0:14:9.33:15,0,9	0/1:11,0:10:0.57:1,0,29	0/1:19,2:21:68.69:69,0,94	0/1:20,2:22:29.66:81,0,30	0/1:22,2:23:11.31:97,0,11	0/1:5,1:6:14.47:16,0,14
chr10	95509688	.	TC	T	11954.11	PASS	AB=0.909;AC=53;AF=0.946;AN=56;BaseQRankSum=-2.012;DP=508;FS=9.176;HRun=2;HaplotypeScore=134.0264;InbreedingCoeff=0.5304;MQ=46.80;MQ0=7;MQRankSum=-0.596;QD=24.70;ReadPosRankSum=0.627;VQSLOD=3.7014;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,35:37:80.92:1016,81,0	1/1:2,7:9:20.27:265,20,0	0/0:23,0:10:9.13:0,9,202	0/1:18,2:7:20.31:20,0,63	1/1:6,16:22:39.01:430,39,0	1/1:4,16:20:51:577,51,0	1/1:5,21:26:69.04:801,69,0	1/1:7,13:19:42.01:477,42,0	1/1:5,12:17:36.10:428,36,0	1/1:11,12:23:62.90:670,63,0	1/1:10,11:21:47.88:471,48,0	1/1:7,7:14:23.02:378,23,0	1/1:5,8:13:38.99:406,39,0	1/1:4,10:14:28.11:359,28,0	1/1:5,10:15:38.77:394,39,0	1/1:12,10:22:50.91:510,51,0	1/1:8,12:19:44.93:472,45,0	1/1:3,10:13:33.08:397,33,0	1/1:6,15:19:36.58:531,37,0	1/1:1,16:17:36.07:437,36,0	1/1:3,7:8:18.04:204,18,0	1/1:7,7:14:33:350,33,0	1/1:1,14:14:33.10:403,33,0	1/1:2,9:10:6.49:76,6,0	1/1:7,11:18:42.03:474,42,0	1/1:6,15:21:46.49:615,46,0	1/1:4,20:23:60.06:708,60,0	1/1:6,1:7:8.98:85,9,0
chr10	95509696	.	T	TG	13498.56	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-0.897;DP=503;FS=11.479;HRun=3;HaplotypeScore=126.0254;InbreedingCoeff=0.8579;MQ=44.17;MQ0=7;MQRankSum=-6.578;QD=31.25;ReadPosRankSum=-2.439;VQSLOD=2.5710;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:84.22:0,84,984	1/1:0,10:10:27.09:377,27,0	0/0:19,0:7:17.51:0,18,166	0/0:16,0:5:2.96:0,3,19	1/1:3,21:24:42.14:586,42,0	1/1:2,20:22:54.18:754,54,0	1/1:5,23:28:63.17:857,63,0	1/1:4,16:20:48.15:651,48,0	1/1:2,14:16:36.12:501,36,0	1/1:2,20:22:60.20:837,60,0	1/1:2,17:19:45.15:625,45,0	1/1:1,11:12:33.11:461,33,0	1/1:2,13:15:39.13:534,39,0	1/1:3,11:14:25.85:398,26,0	1/1:3,11:14:30.10:418,30,0	1/1:2,19:21:54.18:750,54,0	1/1:1,19:19:48.16:671,48,0	1/1:2,13:15:33.08:441,33,0	1/1:9,12:20:36.11:473,36,0	1/1:3,14:17:36.12:501,36,0	1/1:1,10:10:18.06:251,18,0	1/1:0,13:13:36.12:503,36,0	1/1:2,16:17:33.11:459,33,0	1/1:2,8:9:3.01:42,3,0	1/1:2,17:18:39.13:543,39,0	1/1:0,19:19:57.19:784,57,0	1/1:3,23:25:66.22:915,66,0	1/1:1,5:6:12.04:168,12,0
chr10	95510898	.	CTT	C	3541.34	PASS	AB=0.668;AC=41;AF=0.732;AN=56;BaseQRankSum=-3.736;DP=542;FS=2.105;HRun=17;HaplotypeScore=72.3559;InbreedingCoeff=0.2165;MQ=73.14;MQ0=7;MQRankSum=-0.752;QD=7.89;ReadPosRankSum=4.565;VQSLOD=0.5625;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:20:25.85:0,26,250	0/1:7,4:12:48.07:48,0,81	0/0:43,0:17:14.29:0,14,95	0/0:29,0:12:0.47:0,0,2	0/1:7,3:20:36.33:36,0,120	1/1:2,12:17:17.19:157,17,0	1/1:2,9:12:17.64:173,18,0	0/1:10,1:18:23.09:23,0,73	0/1:10,0:15:23.09:23,0,52	1/1:14,9:23:25.64:207,26,0	1/1:4,9:16:31.90:232,32,0	1/1:4,6:11:20.39:142,20,0	1/1:6,3:14:20.18:141,20,0	1/1:8,11:21:21.18:232,21,0	0/1:8,3:19:44.59:45,0,63	0/1:9,1:18:2.03:2,0,91	1/1:7,16:25:39.90:306,40,0	1/1:7,13:20:12.44:217,12,0	1/1:11,8:21:25.97:227,26,0	1/1:11,16:28:8.55:280,9,0	0/1:4,2:9:0.15:39,0,0	1/1:5,10:17:14.42:193,14,0	1/1:2,3:6:11.68:83,12,0	1/1:6,8:17:8.33:97,8,0	0/1:13,3:20:28.14:28,0,180	1/1:9,20:31:10.87:396,11,0	1/1:10,11:23:23.01:213,23,0	0/1:4,1:15:0.91:1,0,63
chr10	95512122	.	TAGCCA	T	1274.21	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.353;DP=589;FS=17.148;HRun=0;HaplotypeScore=112.8140;InbreedingCoeff=0.9684;MQ=82.45;MQ0=0;MQRankSum=-7.917;QD=35.39;ReadPosRankSum=1.163;VQSLOD=2.0692;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,3818	0/0:4,0:4:12.04:0,12,388	0/0:17,0:17:51.17:0,51,1524	0/0:20,0:20:57.20:0,57,1632	0/0:28,0:28:78.25:0,78,2402	0/0:24,0:24:69.24:0,69,2204	0/0:19,0:19:54.19:0,54,1715	0/0:28,0:28:81.27:0,81,2436	0/0:22,0:22:66.23:0,66,2133	0/0:20,0:20:60.21:0,60,1857	0/0:19,0:19:57.18:0,57,1670	0/0:20,0:20:60.19:0,60,1768	0/0:23,0:23:69.24:0,69,2184	0/0:16,0:16:48.16:0,48,1440	0/0:27,0:27:75.26:0,75,2348	0/0:24,0:24:66.23:0,66,2061	1/1:5,18:23:39.13:869,39,0	1/1:1,12:13:27.05:526,27,0	0/0:24,0:24:72.25:0,72,2246	0/0:15,0:15:39.13:0,39,1209	0/0:27,0:27:81.28:0,81,2463	0/0:12,0:12:36.11:0,36,1050	0/0:12,0:12:36.12:0,36,1159	0/0:23,0:23:69.24:0,69,2132	0/0:21,0:21:54.19:0,54,1742	0/0:35,0:35:99:0,105,3240	0/0:26,0:26:72.25:0,72,2240	0/0:5,0:5:12.04:0,12,388
chr10	95512156	.	A	AT	2783.22	PASS	AB=0.969;AC=20;AF=0.357;AN=56;BaseQRankSum=-11.367;DP=495;FS=2.558;HRun=10;HaplotypeScore=55.3813;InbreedingCoeff=0.7473;MQ=74.75;MQ0=0;MQRankSum=2.396;QD=14.20;ReadPosRankSum=0.069;VQSLOD=3.6484;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,117,957	1/1:0,2:2:3.01:32,3,0	0/1:17,0:14:3.49:3,0,128	0/1:15,0:13:0.24:0,0,54	1/1:2,18:20:44.97:451,45,0	0/0:22,0:21:56.91:0,57,468	0/0:14,0:14:29.92:0,30,246	1/1:6,25:31:75.13:771,75,0	1/1:3,9:12:24.06:256,24,0	0/0:20,0:20:50.92:0,51,416	0/1:12,1:14:0:0,0,188	0/0:11,0:11:23.95:0,24,197	0/0:16,0:16:41.88:0,42,333	0/0:15,0:15:35.96:0,36,295	1/1:3,16:19:39.05:403,39,0	1/1:4,19:24:22.65:481,23,0	0/0:26,0:26:59.88:0,60,491	0/0:10,0:10:26.96:0,27,221	0/0:21,0:21:50.92:0,51,416	0/0:12,0:12:29.95:0,30,246	0/1:15,1:16:15.11:15,0,249	0/0:7,0:7:11.98:0,12,99	0/0:14,0:14:41.87:0,42,330	0/0:17,0:17:41.93:0,42,345	1/1:1,18:19:17.34:374,17,0	0/0:25,0:25:55.90:0,56,443	0/0:23,0:23:53.86:0,54,436	1/1:0,7:7:18.05:192,18,0
chr10	95512438	.	A	AT	2471.72	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=0.928;DP=353;FS=9.794;HRun=10;HaplotypeScore=59.0808;InbreedingCoeff=0.7796;MQ=66.72;MQ0=4;MQRankSum=-2.934;QD=18.31;ReadPosRankSum=-0.750;VQSLOD=3.7589;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:53.15:0,53,426	0/0:4,0:4:8.97:0,9,70	0/0:17,0:10:13.37:0,13,89	0/0:32,0:13:0.85:0,1,68	0/0:19,0:19:47.93:0,48,392	1/1:5,8:13:5.45:256,5,0	1/1:3,3:6:6.02:64,6,0	0/0:24,0:24:50.89:0,51,413	0/0:11,0:11:20.97:0,21,172	1/1:6,7:13:24.05:251,24,0	1/1:5,8:12:18:180,18,0	1/1:0,3:3:9.02:96,9,0	1/1:1,5:6:15.04:159,15,0	1/1:0,1:1:3.01:32,3,0	0/0:6,0:6:14.98:0,15,123	0/0:10,0:10:18.86:0,19,150	0/0:40,0:40:77.88:0,78,638	0/0:14,0:14:23.95:0,24,197	1/1:10,11:22:23.57:438,24,0	1/1:3,9:12:27.06:282,27,0	1/1:1,4:5:12.03:128,12,0	1/1:1,1:2:6.02:64,6,0	1/1:0,1:1:3.01:32,3,0	1/1:1,3:4:6.01:64,6,0	0/0:15,0:15:41.95:0,42,345	1/1:2,12:14:14.45:359,14,0	1/1:6,6:13:27.04:272,27,0	0/1:7,0:7:2.89:3,0,41
chr10	95512464	.	AT	A	4503.74	PASS	AB=0.870;AC=53;AF=0.946;AN=56;BaseQRankSum=-4.361;DP=396;FS=0.000;HRun=11;HaplotypeScore=59.0433;InbreedingCoeff=0.1098;MQ=66.55;MQ0=14;MQRankSum=1.699;QD=11.37;ReadPosRankSum=2.826;VQSLOD=4.1773;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,25:31:53.89:443,54,0	1/1:0,3:3:8.99:74,9,0	0/1:43,0:16:12.28:12,0,37	0/1:53,2:16:2.36:2,0,83	1/1:3,15:18:44.94:369,45,0	1/1:4,6:10:26.96:221,27,0	1/1:2,2:4:8.99:74,9,0	1/1:3,18:22:52.72:412,53,0	1/1:3,7:10:11.97:99,12,0	1/1:6,10:15:38.95:320,39,0	1/1:7,6:12:26.92:216,27,0	1/1:2,4:5:11.97:97,12,0	1/1:3,3:5:8.99:74,9,0	1/1:0,3:3:5.99:49,6,0	1/1:1,4:5:11.97:99,12,0	1/1:3,3:6:5.97:49,6,0	1/1:5,0:38:42.76:123,43,0	1/1:0,0:12:22.41:65,22,0	1/1:8,10:17:41.90:338,42,0	1/1:7,3:10:14.98:123,15,0	1/1:1,3:4:10.81:79,11,0	1/1:1,3:4:11.98:98,12,0	1/1:0,1:1:2.94:18,3,0	1/1:2,3:4:11.99:98,12,0	1/1:0,16:16:41.95:345,42,0	1/1:5,11:16:44.93:366,45,0	1/1:3,9:12:17.96:222,18,0	0/1:3,3:5:6.50:19,0,7
chr10	95512482	.	C	CT	3562.38	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-1.204;DP=374;FS=7.551;HRun=8;HaplotypeScore=58.4829;InbreedingCoeff=0.8328;MQ=54.33;MQ0=10;MQRankSum=-2.415;QD=17.81;ReadPosRankSum=-1.456;VQSLOD=2.8671;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:54.01:0,54,493	0/0:5,0:5:12.01:0,12,109	1/1:12,0:3:4.30:16,4,0	0/1:33,0:7:0.31:0,0,26	0/0:21,0:21:54.03:0,54,493	1/1:3,7:10:27.08:311,27,0	1/1:5,2:6:11.99:123,12,0	0/0:30,0:29:65.88:0,66,581	0/0:9,0:9:15:0,15,137	1/1:9,8:16:14.64:413,15,0	1/1:10,7:16:33.09:375,33,0	1/1:1,4:4:11.99:123,12,0	1/1:4,2:5:6.02:69,6,0	1/1:1,2:3:3.01:35,3,0	0/0:6,0:5:15.01:0,15,137	0/0:5,0:5:12.01:0,12,110	0/0:33,0:33:63.03:0,63,576	0/0:18,0:18:51.03:0,51,467	1/1:7,10:16:33.10:381,33,0	1/1:6,8:14:36.07:402,36,0	1/1:2,5:7:9.03:104,9,0	1/1:3,5:8:21.05:232,21,0	1/1:2,5:7:12.91:132,13,0	1/1:3,2:4:8.98:89,9,0	0/0:18,0:18:30:0,30,274	1/1:7,10:17:14.68:414,15,0	1/1:6,8:14:30.09:343,30,0	0/0:3,0:2:3:0,3,27
chr10	95512825	.	C	CA	15860.10	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-11.527;DP=635;FS=8.996;HRun=1;HaplotypeScore=65.7326;InbreedingCoeff=0.9998;MQ=88.92;MQ0=0;MQRankSum=-4.037;QD=40.25;ReadPosRankSum=4.355;VQSLOD=5.1366;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:73.47:0,73,925	0/0:11,0:11:33.11:0,33,428	0/0:26,0:26:78.16:0,78,941	0/0:21,0:21:57.18:0,57,715	0/0:33,0:33:96.26:0,96,1201	1/1:1,24:25:63.21:944,63,0	1/1:1,20:21:60.20:899,60,0	0/0:36,0:36:93.30:0,93,1207	0/0:15,0:15:45.15:0,45,584	1/1:1,23:24:68.48:1008,68,0	1/1:0,20:19:51.13:739,51,0	1/1:0,23:23:60.20:899,60,0	1/1:1,20:21:57.19:850,57,0	1/1:0,23:23:66.22:989,66,0	0/0:28,0:28:81.25:0,81,1039	0/0:15,0:15:42.11:0,42,517	1/1:2,25:27:72.24:1079,72,0	1/1:0,17:17:48.16:719,48,0	1/1:0,27:27:78.25:1132,78,0	1/1:0,13:13:36.12:540,36,0	1/1:1,37:38:99:1574,105,0	1/1:0,19:19:48.16:718,48,0	1/1:1,26:27:65.62:963,66,0	1/1:2,16:18:48.12:695,48,0	0/0:21,0:21:57.18:0,57,740	1/1:1,29:30:87.29:1303,87,0	1/1:2,19:21:54.18:809,54,0	0/0:9,0:9:27.04:0,27,317
chr10	95513839	.	AGAACC	A	408.16	PASS	AB=0.988;AC=12;AF=0.222;AN=54;BaseQRankSum=-1.102;DP=423;FS=6.156;HRun=0;HaplotypeScore=87.3724;InbreedingCoeff=-0.1421;MQ=38.22;MQ0=22;MQRankSum=-0.021;QD=2.67;ReadPosRankSum=-3.577;VQSLOD=0.3840;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:44.70:0,45,1165	0/1:3,0:3:5.66:6,0,97	1/1:0,1:1:3.01:63,3,0	./.	0/0:21,0:21:0.59:0,1,617	0/0:18,0:18:47.95:0,48,1110	0/1:15,0:14:36.73:37,0,618	0/0:22,1:22:52.26:0,52,1176	0/0:9,0:9:24.96:0,25,462	0/1:13,0:11:2.51:3,0,473	0/0:22,0:22:26.54:0,27,524	0/1:12,0:11:14.16:14,0,462	0/1:20,0:18:43.56:44,0,769	0/0:18,0:16:28.27:0,28,731	0/1:14,0:14:50.29:50,0,467	0/0:14,2:15:32.77:0,33,568	0/1:17,1:15:52.09:52,0,386	0/1:17,0:16:99:183,0,183	0/0:23,0:21:50.74:0,51,847	0/0:21,0:18:45.04:0,45,719	0/0:3,0:3:6.02:0,6,143	0/0:12,0:12:21.05:0,21,327	0/0:17,0:17:7.95:0,8,589	0/0:8,0:7:20.92:0,21,389	0/0:20,0:17:50.47:0,50,766	0/1:14,1:15:36.62:37,0,553	0/1:24,0:23:61.48:61,0,661	0/0:10,0:7:9.76:0,10,201
chr10	95514754	.	GT	G	6400.29	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=-4.561;DP=420;FS=2.728;HRun=12;HaplotypeScore=41.8873;InbreedingCoeff=0.7986;MQ=70.21;MQ0=1;MQRankSum=-0.446;QD=17.58;ReadPosRankSum=2.865;VQSLOD=5.8405;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,19:24:44.80:348,45,0	1/1:1,4:5:11.95:93,12,0	0/0:35,1:12:17.93:0,18,148	0/0:16,1:7:7.97:0,8,44	1/1:4,25:30:76.56:569,77,0	1/1:4,19:23:56.77:441,57,0	1/1:1,6:7:11.95:93,12,0	1/1:5,27:32:52.99:578,53,0	1/1:0,7:7:14.94:116,15,0	1/1:2,13:16:40.57:307,41,0	1/1:3,12:15:32.78:250,33,0	1/1:1,12:13:32.87:255,33,0	1/1:1,4:5:11.95:93,12,0	1/1:0,3:3:8.97:70,9,0	1/1:1,10:11:17.93:139,18,0	1/1:1,11:15:38.98:273,39,0	1/1:2,31:34:76.71:583,77,0	1/1:2,10:13:28.93:215,29,0	1/1:3,12:16:37.88:282,38,0	1/1:6,15:22:34.81:333,35,0	1/1:2,2:4:5.96:46,6,0	1/1:0,3:3:8.97:70,9,0	1/1:1,6:7:17.93:139,18,0	1/1:0,7:7:20.92:163,21,0	1/1:3,12:16:31.87:238,32,0	1/1:2,15:17:44.79:348,45,0	1/1:0,17:19:48.90:360,49,0	./.
chr10	95515630	.	C	CA	9000.94	PASS	AB=0.933;AC=35;AF=0.625;AN=56;BaseQRankSum=-0.619;DP=596;FS=8.208;HRun=8;HaplotypeScore=134.5123;InbreedingCoeff=0.8928;MQ=64.07;MQ0=3;MQRankSum=-6.660;QD=23.69;ReadPosRankSum=0.309;VQSLOD=3.3451;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,120,1081	0/0:5,0:5:13.85:0,14,61	0/0:21,0:18:24.60:0,25,269	0/0:21,0:13:2.81:0,3,190	0/0:26,0:26:64.70:0,65,302	1/1:1,21:22:54.15:620,54,0	1/1:5,17:22:38.09:517,38,0	0/0:28,0:28:51.62:0,52,243	0/1:13,1:14:22.59:23,0,99	1/1:7,20:28:45.04:709,45,0	1/1:2,13:16:35.50:363,36,0	1/1:4,23:27:60.17:689,60,0	1/1:2,13:16:38.95:428,39,0	1/1:3,18:21:54.16:620,54,0	0/0:15,0:15:33.83:0,34,158	0/0:14,0:14:29.15:0,29,136	1/1:7,27:34:66.19:758,66,0	1/1:2,20:22:48.09:533,48,0	1/1:12,18:30:48.97:601,49,0	1/1:5,12:17:36.10:411,36,0	1/1:4,13:17:27.08:308,27,0	1/1:6,17:23:29.69:558,30,0	1/1:3,16:19:48.09:532,48,0	1/1:3,12:15:25.69:371,26,0	0/0:23,1:24:21.82:0,22,205	1/1:5,18:23:54.57:602,55,0	1/1:6,8:13:33.05:359,33,0	0/0:17,0:17:39.42:0,39,187
chr10	95516543	.	T	TACATAC	1824.60	PASS	AB=0.859;AC=17;AF=0.304;AN=56;BaseQRankSum=-2.516;DP=522;FS=3.228;HRun=0;HaplotypeScore=121.0094;InbreedingCoeff=0.7127;MQ=59.91;MQ0=9;MQRankSum=0.596;QD=9.86;ReadPosRankSum=-4.801;VQSLOD=1.0215;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:29:40.28:0,40,493	1/1:13,0:14:29.12:299,29,0	0/0:23,0:14:27:0,27,258	0/0:28,0:18:40.43:0,40,487	1/1:21,1:21:32.69:336,33,0	0/0:21,0:21:32.70:0,33,267	0/0:25,0:23:32.94:0,33,275	1/1:32,0:32:67.57:691,68,0	1/1:3,7:13:5.90:75,6,0	0/0:11,0:11:20.82:0,21,194	0/0:13,0:12:15:0,15,154	0/0:19,0:18:37.38:0,37,318	0/0:16,0:15:29.75:0,30,271	0/1:15,0:15:0.86:1,0,117	1/1:6,18:27:6.16:118,6,0	1/1:4,13:20:4:210,4,0	0/0:14,0:25:34.44:0,34,361	0/0:8,0:8:22.65:0,23,185	0/0:13,0:10:16.20:0,16,139	0/0:15,0:15:29.79:0,30,226	0/1:21,0:20:17.29:17,0,178	0/0:19,0:19:14.77:0,15,153	0/0:7,0:7:8.54:0,9,101	0/0:24,0:24:44.59:0,45,409	0/1:4,9:15:0.07:152,0,0	0/0:17,0:16:31.86:0,32,275	0/0:23,0:23:20.94:0,21,197	1/1:1,5:6:2.64:106,3,0
chr10	95516580	.	ACACACACACT	A	3739.02	PASS	AB=0.785;AC=28;AF=0.500;AN=56;BaseQRankSum=0.954;DP=556;FS=11.437;HRun=0;HaplotypeScore=147.4412;InbreedingCoeff=0.6383;MQ=55.17;MQ0=24;MQRankSum=0.460;QD=11.43;ReadPosRankSum=-0.557;VQSLOD=2.0072;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:15.74:0,16,505	0/0:12,0:12:28.17:0,28,310	0/0:29,0:7:14.16:0,14,169	0/1:39,0:12:5.07:5,0,186	0/0:19,0:18:32.79:0,33,759	1/1:22,0:21:14.82:288,15,0	1/1:2,19:19:3.01:97,3,0	0/0:25,0:26:74.71:0,75,723	0/0:15,0:15:22.94:0,23,459	1/1:1,10:11:29.63:313,30,0	1/1:3,10:12:3.01:98,3,0	1/1:27,2:28:12.19:520,12,0	1/1:22,2:24:41.09:477,41,0	1/1:18,0:18:29.17:275,29,0	0/0:29,0:29:39.50:0,39,636	0/0:15,0:15:21.05:0,21,468	0/0:25,0:25:35.74:0,36,404	0/0:13,0:12:32.48:0,32,343	0/1:17,0:15:4.99:175,0,5	1/1:3,8:11:0.53:101,1,0	1/1:28,0:26:3.96:308,4,0	1/1:4,14:18:6.02:141,6,0	0/1:3,6:9:16.39:95,0,16	0/1:3,18:21:1.54:281,0,2	0/0:13,0:13:26.68:0,27,768	1/1:3,15:16:32.95:351,33,0	1/1:4,23:27:7.91:215,8,0	0/0:6,0:6:14.98:0,15,321
chr10	95517328	.	C	CCATA	23362.74	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-16.241;DP=695;FS=1.692;HRun=0;HaplotypeScore=110.2235;InbreedingCoeff=0.9978;MQ=79.34;MQ0=0;MQRankSum=-6.214;QD=62.80;ReadPosRankSum=5.576;VQSLOD=6.9139;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:63.20:0,63,1129	0/0:5,0:5:15.04:0,15,246	0/0:31,0:31:63.39:0,63,1138	0/0:25,0:25:57.11:0,57,943	0/0:27,0:27:72.25:0,72,1305	1/1:3,24:28:72.25:1900,72,0	1/1:3,23:26:57.20:1502,57,0	0/0:46,0:46:99:0,117,2115	0/0:25,0:25:72.20:0,72,1219	1/1:3,20:25:63.18:1551,63,0	1/1:6,20:26:60.21:1578,60,0	1/1:4,24:30:69.24:1808,69,0	1/1:1,13:14:39.13:1024,39,0	1/1:3,20:24:63.22:1648,63,0	0/0:39,0:39:99:0,111,2005	0/0:23,0:23:69.22:0,69,1238	0/0:22,0:22:63.22:0,63,1143	0/0:18,0:18:39.12:0,39,687	1/1:7,18:25:63.20:1550,63,0	1/1:8,25:33:72.25:1899,72,0	1/1:2,17:19:42.14:1109,42,0	1/1:2,26:28:75.26:1975,75,0	1/1:6,14:21:36.12:949,36,0	1/1:1,14:15:42.14:1109,42,0	0/0:20,0:20:54.17:0,54,965	1/1:3,22:26:72.20:1716,72,0	1/1:7,24:31:78.27:2046,78,0	0/0:15,0:15:36.12:0,36,662
chr10	95518109	.	G	GC	13409.67	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-2.745;DP=555;FS=10.693;HRun=2;HaplotypeScore=76.7920;InbreedingCoeff=0.9899;MQ=71.68;MQ0=0;MQRankSum=-0.247;QD=36.54;ReadPosRankSum=1.444;VQSLOD=4.9023;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1255	0/0:10,0:10:27.08:0,27,333	0/0:10,0:10:18.05:0,18,223	0/0:13,0:13:25.32:0,25,313	0/0:18,0:18:48.12:0,48,568	1/1:1,22:22:54.18:777,54,0	1/1:0,16:16:42.14:605,42,0	0/0:24,0:24:65.38:0,65,771	0/0:17,0:17:51.16:0,51,630	1/1:0,12:12:36.11:500,36,0	1/1:1,14:15:33.11:476,33,0	1/1:2,26:28:72.24:1036,72,0	1/1:1,13:14:36.12:516,36,0	1/1:2,12:14:33.11:475,33,0	0/0:20,0:20:54.14:0,54,644	0/0:21,0:21:60.19:0,60,743	1/1:0,28:28:78.22:1100,78,0	1/1:1,16:17:45.10:624,45,0	1/1:3,31:33:90.23:1217,90,0	1/1:1,23:25:69.19:962,69,0	1/1:0,32:32:81.27:1166,81,0	1/1:1,25:26:66.22:949,66,0	1/1:0,24:24:51.17:733,51,0	1/1:1,31:32:84.28:1209,84,0	0/0:15,0:15:42.10:0,42,495	1/1:1,14:15:45.14:633,45,0	1/1:1,11:12:30.10:432,30,0	0/0:3,0:3:9.03:0,9,112
chr10	95518268	.	G	GA	722.60	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.347;DP=622;FS=6.878;HRun=9;HaplotypeScore=90.4211;InbreedingCoeff=0.9459;MQ=74.84;MQ0=0;MQRankSum=-1.360;QD=18.06;ReadPosRankSum=1.248;VQSLOD=3.7006;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:86:0,86,733	0/0:3,0:3:9:0,9,78	0/0:46,0:29:31.30:0,31,368	0/0:36,0:28:38.83:0,39,341	0/0:18,0:18:41.96:0,42,360	0/0:26,0:27:70.99:0,71,605	0/0:11,0:11:29.97:0,30,256	0/0:47,0:47:92.02:0,92,839	0/0:22,0:23:56.02:0,56,474	0/0:27,0:27:68.97:0,69,598	0/0:16,0:16:41.98:0,42,361	0/0:22,0:22:50.98:0,51,443	0/0:12,0:12:29.99:0,30,260	0/0:16,0:16:12.90:0,13,286	0/0:17,0:17:47.96:0,48,409	0/0:21,0:21:53.93:0,54,456	1/1:6,15:21:18.56:378,19,0	1/1:2,17:19:42.11:465,42,0	0/0:25,0:25:53.96:0,54,465	0/0:38,0:38:89.95:0,90,777	0/0:19,0:19:41.96:0,42,361	0/0:17,0:17:41.97:0,42,361	0/0:21,0:21:50.96:0,51,439	0/0:15,0:15:38.95:0,39,331	0/0:14,0:14:29.97:0,30,260	0/0:23,0:23:50.19:0,50,424	0/0:29,0:28:83.95:0,84,720	0/0:6,0:6:14.99:0,15,130
chr10	95519347	.	AAAT	A	1323.06	PASS	AC=38;AF=0.826;AN=46;BaseQRankSum=0.499;DP=209;FS=5.027;HRun=0;HaplotypeScore=32.4577;InbreedingCoeff=0.4489;MQ=67.92;MQ0=1;MQRankSum=0.720;QD=9.32;ReadPosRankSum=-1.692;VQSLOD=1.8145;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:36.08:0,36,660	1/1:1,0:2:2.98:21,3,0	./.	./.	1/1:9,0:11:2.98:21,3,0	1/1:4,4:8:6.02:80,6,0	1/1:4,2:6:5.23:47,5,0	1/1:22,7:28:14.99:184,15,0	0/0:5,0:8:0.89:0,1,2	./.	1/1:5,1:6:3.01:40,3,0	1/1:4,1:5:3.01:40,3,0	1/1:6,4:10:12.04:161,12,0	1/1:5,3:8:9.03:120,9,0	1/1:5,0:8:5.95:42,6,0	1/1:3,0:6:5.95:42,6,0	0/0:4,0:17:30.10:0,30,393	0/0:2,0:5:6.02:0,6,79	1/1:4,6:10:18.06:241,18,0	1/1:1,2:3:6.02:80,6,0	./.	./.	1/1:4,0:4:3:26,3,0	1/1:2,1:3:3.01:40,3,0	1/1:6,0:9:5.95:42,6,0	1/1:3,3:6:9.02:105,9,0	1/1:4,1:5:3.01:40,3,0	1/1:1,2:3:6.02:80,6,0
chr10	95519654	.	AC	A	1332.09	PASS	AB=0.525;AC=3;AF=0.056;AN=54;BaseQRankSum=7.584;DP=411;FS=14.651;HRun=2;HaplotypeScore=39.4655;InbreedingCoeff=0.5516;MQ=54.78;MQ0=17;MQRankSum=2.124;QD=27.19;ReadPosRankSum=1.159;VQSLOD=1.8063;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1577	0/0:3,0:3:9.03:0,9,135	0/0:10,0:2:5.82:0,6,35	0/0:17,0:3:8.03:0,8,73	0/0:16,0:16:48.15:0,48,697	0/0:21,0:21:61.09:0,61,895	0/0:11,0:11:30.02:0,30,421	0/0:18,0:18:54.18:0,54,806	0/0:19,0:19:57.18:0,57,835	0/0:11,0:11:33.11:0,33,495	0/0:3,0:3:9.03:0,9,135	0/0:20,0:20:60.19:0,60,878	0/0:11,0:11:33.11:0,33,495	0/0:8,0:8:24.08:0,24,360	0/0:13,0:13:39.13:0,39,579	0/0:13,0:13:39.13:0,39,584	0/1:3,29:32:8.64:892,0,9	1/1:3,14:17:42.14:545,42,0	0/0:20,0:17:54.18:0,54,809	0/0:4,0:4:12.04:0,12,180	0/0:24,0:23:69.23:0,69,1033	0/0:4,0:4:12.04:0,12,171	./.	0/0:19,0:19:57.19:0,57,854	0/0:5,0:5:15.05:0,15,225	0/0:12,0:12:36.12:0,36,540	0/0:19,0:19:54.18:0,54,809	0/0:23,0:23:66.22:0,66,986
chr10	95520754	.	A	ATGTTTGTT	32311.20	PASS	AB=0.559;AC=49;AF=0.875;AN=56;BaseQRankSum=-0.208;DP=898;FS=3.201;HRun=0;HaplotypeScore=213.0824;InbreedingCoeff=0.8316;MQ=64.64;MQ0=1;MQRankSum=-5.587;QD=40.34;ReadPosRankSum=-0.320;VQSLOD=4.4323;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:92.67:0,93,2302	1/1:1,0:10:23.97:198,24,0	0/0:30,0:29:33:0,33,582	0/0:24,0:23:29.92:0,30,548	1/1:8,0:35:77.81:626,78,0	1/1:8,17:26:42.14:1678,42,0	1/1:11,11:22:21.07:667,21,0	1/1:15,0:36:65.61:594,66,0	1/1:9,0:35:56.91:465,57,0	1/1:17,22:44:87.21:2805,87,0	1/1:11,16:28:54.10:2025,54,0	1/1:15,21:39:60.14:2217,60,0	1/1:19,20:39:36.29:1880,36,0	1/1:16,31:48:66.23:2532,66,0	1/1:8,0:46:86.42:716,86,0	1/1:16,0:52:92.87:763,93,0	0/1:7,0:33:91.27:406,0,91	1/1:6,0:18:32.90:278,33,0	1/1:18,9:27:48.10:1204,48,0	1/1:10,16:28:55.89:1633,56,0	1/1:18,10:29:27:796,27,0	1/1:16,24:41:81.11:2789,81,0	1/1:5,19:26:60.19:2225,60,0	1/1:12,13:27:24.01:693,24,0	1/1:11,0:27:41.64:335,42,0	1/1:21,17:40:69.15:2463,69,0	1/1:11,21:33:53.63:2141,54,0	1/1:7,0:12:18:182,18,0
chr10	95521562	.	C	CCG	8419.90	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-14.029;DP=615;FS=0.734;HRun=0;HaplotypeScore=70.1533;InbreedingCoeff=0.9986;MQ=82.18;MQ0=1;MQRankSum=-3.582;QD=45.76;ReadPosRankSum=-0.539;VQSLOD=5.9840;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.27:0,87,1302	1/1:1,11:13:20.85:411,21,0	0/0:17,0:17:35.29:0,35,564	0/0:29,0:28:56.42:0,56,851	1/1:0,25:27:66.14:1215,66,0	0/0:24,0:24:72.14:0,72,1025	0/0:19,0:19:54.09:0,54,733	1/1:0,26:29:81.13:1446,81,0	1/1:0,10:10:21.07:412,21,0	0/0:24,0:23:57.13:0,57,820	0/0:28,0:28:84.28:0,84,1262	0/0:26,0:26:75.25:0,75,1124	0/0:14,0:14:42.14:0,42,638	0/0:24,0:24:72.14:0,72,1033	1/1:2,27:31:72.24:1412,72,0	1/1:1,30:33:65.97:1294,66,0	0/0:22,0:22:60.20:0,60,914	0/0:15,0:15:42.14:0,42,641	0/0:13,0:13:39.03:0,39,534	0/0:22,0:22:63.18:0,63,916	0/0:24,0:24:69.18:0,69,1017	0/0:16,0:16:48.12:0,48,698	0/0:19,0:19:53.21:0,53,773	0/0:16,0:16:48.16:0,48,729	1/1:0,22:23:59.87:1173,60,0	0/0:18,0:18:51.16:0,51,758	0/0:31,0:30:93.25:0,93,1368	1/1:0,18:18:54.19:1058,54,0
chr10	95522387	.	C	CTGAGGAGTG	40616.63	PASS	AB=0.750;AC=49;AF=0.875;AN=56;BaseQRankSum=-8.554;DP=650;FS=20.160;HRun=0;HaplotypeScore=160.5989;InbreedingCoeff=0.8096;MQ=74.92;MQ0=0;MQRankSum=-12.769;QD=73.45;ReadPosRankSum=0.150;VQSLOD=3.5812;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,126,3439	1/1:2,5:7:15.05:696,15,0	0/0:23,0:24:47.96:0,48,999	0/0:21,0:21:38.37:0,38,870	1/1:12,20:32:44.99:2082,45,0	1/1:14,4:19:21.07:740,21,0	1/1:18,9:27:36.12:1587,36,0	1/1:28,9:38:55.38:1763,55,0	1/1:10,19:30:63.22:2797,63,0	1/1:7,16:26:69.24:2868,69,0	1/1:2,12:14:33.11:1529,33,0	1/1:8,11:20:36.12:1499,36,0	1/1:10,17:30:54.19:2413,54,0	1/1:9,15:24:45.15:1920,45,0	1/1:15,18:34:57.20:2444,57,0	1/1:6,13:19:42.14:1948,42,0	1/1:7,6:14:12.04:557,12,0	0/1:8,3:12:99:850,0,144	1/1:17,7:25:42.11:1228,42,0	1/1:12,10:22:30.10:1310,30,0	1/1:10,3:14:12.04:557,12,0	1/1:4,9:13:24.08:1113,24,0	1/1:6,11:18:30.10:1388,30,0	1/1:10,1:13:18.06:723,18,0	1/1:9,5:14:18.06:750,18,0	1/1:10,19:30:69.22:2993,69,0	1/1:20,16:37:66.23:2780,66,0	1/1:6,13:20:45.15:2086,45,0
chr10	95523223	.	ATTT	A	5019.13	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-4.620;DP=448;FS=1.077;HRun=14;HaplotypeScore=77.1289;InbreedingCoeff=0.8595;MQ=61.68;MQ0=4;MQRankSum=-1.294;QD=23.13;ReadPosRankSum=1.615;VQSLOD=4.1548;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:76.61:0,77,1241	0/0:3,0:8:4.62:0,5,10	0/0:22,0:11:12.89:0,13,138	0/0:13,0:5:8.76:0,9,96	0/0:6,0:25:26.11:0,26,83	1/1:1,17:18:42.10:491,42,0	1/1:1,13:12:30.06:351,30,0	0/0:13,0:33:5.51:0,6,90	0/0:0,0:11:8.51:0,9,19	1/1:5,16:21:47.95:532,48,0	1/1:3,15:19:44.81:471,45,0	1/1:5,5:10:9.21:185,9,0	1/1:2,11:13:27.04:316,27,0	1/1:2,12:14:11.14:329,11,0	0/0:3,0:11:8.72:0,9,19	0/0:4,0:11:9.29:0,9,22	0/0:23,0:23:51.17:0,51,956	0/0:16,0:15:45.15:0,45,838	1/1:7,14:17:42.03:448,42,0	1/1:3,17:20:45:526,45,0	1/1:1,7:8:15.04:175,15,0	1/1:4,1:5:2.96:35,3,0	1/1:1,7:8:18.05:210,18,0	1/1:1,0:1:2.50:9,2,0	0/0:2,0:18:17.44:0,17,38	1/1:7,18:25:53.76:609,54,0	1/1:5,13:19:29.94:333,30,0	0/0:0,0:9:11.21:0,11,24
chr10	95526198	.	TG	T	3837.34	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=5.664;DP=439;FS=2.583;HRun=1;HaplotypeScore=112.8336;InbreedingCoeff=0.6464;MQ=55.23;MQ0=6;MQRankSum=-3.408;QD=11.66;ReadPosRankSum=-3.617;VQSLOD=0.8709;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:82.37:0,82,1012	1/1:14,0:14:6.90:57,7,0	0/0:31,0:17:25.09:0,25,363	0/0:31,1:16:8.13:0,8,281	1/1:27,1:28:55.20:402,55,0	1/1:20,0:19:42.62:311,43,0	1/1:5,0:5:6.91:48,7,0	1/1:18,2:19:37.61:239,38,0	1/1:12,0:11:23.85:179,24,0	1/1:18,0:18:42.01:272,42,0	1/1:15,0:15:25.07:182,25,0	1/1:13,0:12:21.41:143,21,0	1/1:8,0:8:21.11:135,21,0	1/1:17,0:16:24.96:190,25,0	1/1:17,0:17:32.25:219,32,0	1/1:10,0:10:18.03:113,18,0	0/1:12,0:12:30.21:43,0,30	0/0:16,0:16:0.34:0,0,30	1/1:12,0:10:18.12:120,18,0	1/1:18,0:18:26.76:173,27,0	1/1:2,0:1:0.47:1,0,0	1/1:5,0:5:3.79:22,4,0	1/1:12,0:12:19.38:133,19,0	1/1:3,0:3:5.94:44,6,0	1/1:18,2:20:30.43:235,30,0	1/1:26,0:21:38.83:266,39,0	1/1:19,0:18:33.52:243,34,0	1/1:3,0:3:8.95:68,9,0
chr10	95526204	.	TG	T	4837.30	PASS	AB=0.969;AC=51;AF=0.911;AN=56;BaseQRankSum=4.735;DP=455;FS=1.317;HRun=1;HaplotypeScore=104.4531;InbreedingCoeff=0.6358;MQ=54.66;MQ0=6;MQRankSum=-2.461;QD=12.22;ReadPosRankSum=-3.369;VQSLOD=2.2297;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:48.96:0,49,830	1/1:1,11:12:17.05:123,17,0	0/0:28,1:15:12.04:0,12,204	0/1:30,1:15:5.42:5,0,148	1/1:30,1:31:70.63:471,71,0	1/1:20,0:19:43.12:316,43,0	1/1:5,0:5:6.43:47,6,0	1/1:20,2:20:38.46:255,38,0	1/1:12,0:11:29.74:224,30,0	1/1:18,0:18:43.13:278,43,0	1/1:15,0:15:24.80:179,25,0	1/1:12,0:11:19.14:122,19,0	1/1:7,0:7:15:109,15,0	1/1:16,0:15:28.98:208,29,0	1/1:21,1:22:45.13:309,45,0	1/1:10,1:11:23.16:162,23,0	1/1:14,0:14:16.57:172,17,0	1/1:1,13:14:0.49:13,0,0	1/1:13,0:11:18.95:123,19,0	1/1:19,2:21:44.60:308,45,0	1/1:2,0:1:0.47:1,0,0	1/1:5,0:5:8.42:47,8,0	1/1:13,0:13:22.96:162,23,0	1/1:3,0:3:5.95:44,6,0	1/1:24,0:24:50.07:382,50,0	1/1:24,0:19:36.19:242,36,0	1/1:23,1:24:55.04:429,55,0	1/1:5,0:5:14.83:104,15,0
chr10	95526210	.	TG	T	4232.72	PASS	AB=0.964;AC=51;AF=0.911;AN=56;BaseQRankSum=4.023;DP=401;FS=8.236;HRun=1;HaplotypeScore=85.4009;InbreedingCoeff=0.5849;MQ=54.11;MQ0=6;MQRankSum=-2.014;QD=12.34;ReadPosRankSum=-2.012;VQSLOD=2.2865;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:29:17.30:0,17,376	1/1:11,0:11:18.71:133,19,0	0/1:26,1:14:21.56:22,0,125	0/0:29,0:13:5.52:0,6,110	1/1:20,0:20:41.46:248,41,0	1/1:20,0:19:44.72:322,45,0	1/1:6,0:6:10.32:58,10,0	1/1:17,1:16:36.93:244,37,0	1/1:9,0:8:21.65:151,22,0	1/1:17,0:17:45.09:283,45,0	1/1:15,0:15:27.51:185,28,0	1/1:12,0:11:20.27:124,20,0	1/1:7,0:7:14.45:111,14,0	1/1:16,0:15:32.64:225,33,0	1/1:15,0:15:31.26:207,31,0	1/1:6,1:7:20.08:139,20,0	1/1:12,1:13:27.11:186,27,0	1/1:17,0:17:14.64:109,15,0	1/1:15,0:13:23.51:144,24,0	1/1:13,1:14:24.26:168,24,0	1/1:2,0:1:1.25:3,1,0	1/1:5,0:5:8.52:49,9,0	1/1:9,0:9:20.87:148,21,0	1/1:2,0:2:2.96:19,3,0	1/1:20,0:20:46.53:346,47,0	1/1:23,0:18:39.20:231,39,0	1/1:18,1:19:41.81:322,42,0	1/1:4,0:4:8.87:58,9,0
chr10	95526211	.	G	GT	585.87	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-1.873;DP=396;FS=1.330;HRun=13;HaplotypeScore=95.9529;InbreedingCoeff=0.0476;MQ=56.05;MQ0=7;MQRankSum=-1.666;QD=1.54;ReadPosRankSum=-1.401;VQSLOD=-0.3789;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,12:29:9.91:241,10,0	1/1:10,0:10:4.93:13,5,0	0/1:29,0:15:8.69:9,0,67	0/1:28,0:14:22:29,0,22	1/1:16,0:16:3.07:61,3,0	1/1:20,0:19:1.36:5,1,0	0/1:6,0:6:0:1,0,0	1/1:20,0:18:8.20:46,8,0	1/1:9,0:8:6.12:27,6,0	0/1:17,0:17:2.41:8,0,2	0/0:15,0:15:3.40:0,3,8	1/1:12,0:11:1.48:5,1,0	1/1:7,0:7:6.28:22,6,0	1/1:16,0:15:9.06:44,9,0	1/1:13,0:13:6.17:32,6,0	1/1:7,0:7:3.84:22,4,0	0/1:13,0:13:5.80:18,0,6	0/1:15,0:16:13.51:15,0,14	1/1:15,0:13:4.92:15,5,0	1/1:13,0:13:4.77:24,5,0	0/1:2,0:1:0:0,0,0	1/1:5,0:5:2.44:6,2,0	1/1:9,0:9:2.75:23,3,0	1/1:2,0:2:0.47:1,0,0	0/1:19,0:19:7.20:7,0,8	0/1:24,0:19:1.90:11,0,2	1/1:18,0:18:2.63:14,3,0	1/1:4,0:4:0.94:3,1,0
chr10	95526224	.	TG	T	2038.37	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=0.471;DP=338;FS=4.631;HRun=1;HaplotypeScore=64.1849;InbreedingCoeff=0.8599;MQ=74.46;MQ0=5;MQRankSum=-0.840;QD=14.88;ReadPosRankSum=-1.796;VQSLOD=2.6353;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:44.40:0,44,319	0/1:12,0:12:0.25:0,0,138	0/0:25,0:16:18.82:0,19,298	0/0:23,1:15:25.18:0,25,200	0/0:23,0:23:3.51:0,4,438	1/1:7,0:6:17.90:138,18,0	1/1:5,0:5:14:106,14,0	0/0:23,0:22:33.51:0,34,417	0/0:14,0:13:31.13:0,31,261	1/1:13,0:13:33.60:278,34,0	1/1:7,0:7:16.30:139,16,0	1/1:8,0:8:18.37:142,18,0	1/1:7,0:7:18.44:152,18,0	1/1:6,0:6:12.48:109,12,0	0/0:16,0:16:26.62:0,27,259	0/0:7,0:7:17.34:0,17,146	0/0:9,0:9:17.79:0,18,149	0/0:14,0:14:20.65:0,21,157	1/1:13,0:12:23.25:190,23,0	1/1:2,14:16:29.73:211,30,0	1/1:1,0:1:3:27,3,0	1/1:4,0:4:12.01:110,12,0	1/1:9,0:9:21.43:182,21,0	1/1:3,0:3:5.97:46,6,0	0/0:21,0:21:50.26:0,50,471	1/1:9,0:8:19.14:126,19,0	1/1:17,0:17:36.21:300,36,0	0/0:4,0:4:4.02:0,4,45
chr10	95527156	.	AGT	A	3884.23	PASS	AB=0.992;AC=48;AF=0.857;AN=56;BaseQRankSum=0.636;DP=712;FS=5.935;HRun=0;HaplotypeScore=159.0086;InbreedingCoeff=0.0201;MQ=54.27;MQ0=19;MQRankSum=2.472;QD=5.62;ReadPosRankSum=-2.619;VQSLOD=2.6247;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:31:11.53:12,0,230	1/1:15,0:15:11.83:81,12,0	0/0:21,0:4:4.75:0,5,54	0/1:50,0:17:25.58:58,0,26	1/1:15,1:16:8.89:62,9,0	1/1:25,0:25:6.78:191,7,0	1/1:23,0:23:10.99:83,11,0	1/1:32,0:30:6.02:322,6,0	1/1:3,19:22:11.90:100,12,0	0/1:19,0:18:8.57:170,0,9	1/1:21,1:22:11.02:201,11,0	0/1:23,0:23:5.98:79,0,6	1/1:25,4:29:40.32:354,40,0	0/1:25,0:24:9.46:42,0,9	1/1:24,2:25:23.72:167,24,0	1/1:23,2:25:35.76:291,36,0	1/1:28,2:30:31.22:256,31,0	1/1:4,16:19:0.55:40,1,0	1/1:19,0:12:3.19:134,3,0	0/1:30,1:31:3.07:26,0,3	1/1:37,0:36:23.16:338,23,0	1/1:16,0:16:10.35:78,10,0	1/1:21,0:21:17.45:143,17,0	1/1:44,0:43:8.63:37,9,0	1/1:17,0:17:9.34:67,9,0	1/1:36,0:36:9.69:340,10,0	1/1:21,0:19:12.71:91,13,0	1/1:6,7:12:19.66:120,20,0
chr10	95527164	.	A	AGT	3085.38	PASS	AB=0.963;AC=30;AF=0.536;AN=56;BaseQRankSum=5.874;DP=707;FS=11.325;HRun=0;HaplotypeScore=165.4618;InbreedingCoeff=-0.0857;MQ=59.22;MQ0=19;MQRankSum=2.881;QD=5.76;ReadPosRankSum=2.009;VQSLOD=2.8256;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:37.34:0,37,501	1/1:12,0:12:7.18:34,7,0	0/0:26,0:7:17.05:0,17,176	0/0:63,0:26:35.54:0,36,548	0/0:17,0:17:1.82:0,2,5	1/1:27,0:26:0.21:205,0,0	0/1:23,0:23:28.52:101,0,29	0/1:35,0:33:35.75:338,0,36	0/1:24,0:25:0.07:84,0,0	1/1:18,0:17:18.45:272,18,0	1/1:17,0:17:1.07:116,1,0	0/1:23,2:25:5.35:162,0,5	1/1:27,3:31:38.01:484,38,0	1/1:24,1:24:10.28:108,10,0	0/1:19,0:20:18.97:19,0,19	0/1:21,0:22:11.79:104,0,12	0/1:24,0:24:21.07:21,0,126	0/0:18,0:17:5.99:0,6,59	0/1:18,0:12:25.53:116,0,26	1/1:32,0:32:5.82:34,6,0	0/1:40,0:39:59.32:334,0,59	0/0:19,0:19:4.18:0,4,78	0/1:15,0:15:16.21:20,0,16	0/1:16,26:45:18.89:134,0,19	0/1:15,0:15:1.32:20,0,1	0/1:34,0:34:92.61:376,0,93	0/1:19,1:18:41.17:79,0,41	1/1:11,0:10:9.22:89,9,0
chr10	95527168	.	AGAGAGT	A	8613.46	PASS	AB=0.832;AC=33;AF=0.589;AN=56;BaseQRankSum=-5.915;DP=705;FS=0.000;HRun=0;HaplotypeScore=171.3562;InbreedingCoeff=0.1028;MQ=61.23;MQ0=19;MQRankSum=0.155;QD=16.63;ReadPosRankSum=2.331;VQSLOD=4.4067;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:26:45.47:0,45,976	1/1:0,11:11:9:124,9,0	0/0:28,0:9:5.71:0,6,345	0/0:66,0:29:54.58:0,55,975	1/1:2,15:17:3.01:72,3,0	0/1:26,1:26:99:556,0,207	0/0:7,14:21:15.26:0,15,147	1/1:4,30:32:87.15:1353,87,0	1/1:18,3:21:24.06:391,24,0	0/1:16,3:18:99:639,0,119	0/1:15,0:15:23.94:304,0,24	0/1:7,17:24:38.38:38,0,135	0/1:30,1:31:99:850,0,191	0/0:14,11:24:14.68:0,15,174	1/1:2,20:22:17.74:333,18,0	1/1:5,15:20:24.07:404,24,0	0/1:6,19:25:99:112,0,125	0/1:19,0:18:25.98:64,0,26	1/1:5,15:14:35.79:547,36,0	1/1:4,29:33:11.93:129,12,0	0/1:36,2:37:99:973,0,219	0/0:8,10:18:11.84:0,12,156	1/1:6,10:16:9.69:74,10,0	0/1:46,0:45:17.09:17,0,317	1/1:0,14:14:3.48:74,3,0	0/1:12,24:36:99:1096,0,143	0/1:9,10:18:51.61:52,0,154	1/1:7,4:10:21.06:410,21,0
chr10	95529813	.	AAGG	A	9048.29	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.159;DP=746;FS=7.038;HRun=0;HaplotypeScore=113.3594;InbreedingCoeff=0.9976;MQ=81.83;MQ0=0;MQRankSum=-5.842;QD=42.48;ReadPosRankSum=0.197;VQSLOD=6.3374;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,2552	1/1:1,8:9:24:373,24,0	0/0:28,0:28:75.94:0,76,1493	0/0:16,0:17:42.47:0,42,757	1/1:0,34:34:89.95:1331,90,0	0/0:21,0:21:60.18:0,60,1295	0/0:11,0:11:17.09:0,17,478	1/1:3,41:44:99:1980,123,0	1/1:0,22:22:54.18:920,54,0	0/0:33,0:33:96.32:0,96,2117	0/0:31,0:31:89.34:0,89,1971	0/0:26,0:26:78.27:0,78,1789	0/0:21,0:21:63.22:0,63,1413	0/0:23,0:23:69.20:0,69,1490	1/1:0,36:36:87.30:1470,87,0	1/1:0,28:28:78.27:1322,78,0	0/0:20,0:20:24.30:0,24,1238	0/0:10,0:10:30.10:0,30,673	0/0:20,0:20:60.18:0,60,1233	0/0:34,0:34:96.32:0,96,2131	0/0:34,0:34:99:0,102,2339	0/0:23,0:23:69.24:0,69,1589	0/0:43,0:43:99:0,129,2870	0/0:34,0:34:99:0,102,2294	1/1:1,24:25:60.16:989,60,0	0/0:30,0:30:87.28:0,87,1860	0/0:34,0:33:99:0,102,2263	1/1:0,15:15:39.13:663,39,0
chr10	95533127	.	AAAAAG	A	3216.25	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=-5.854;DP=514;FS=2.611;HRun=0;HaplotypeScore=118.0644;InbreedingCoeff=0.3775;MQ=58.06;MQ0=27;MQRankSum=4.932;QD=12.81;ReadPosRankSum=0.594;VQSLOD=3.2485;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:53.11:0,53,696	1/1:0,8:8:9.50:170,10,0	0/0:41,0:15:6.56:0,7,208	0/0:39,0:10:10.16:0,10,239	1/1:4,20:23:41.89:590,42,0	0/0:19,0:19:26.32:0,26,463	0/1:19,0:19:49.17:49,0,374	1/1:4,33:35:99:1441,105,0	1/1:6,3:7:18.02:262,18,0	0/0:21,0:19:19.81:0,20,367	0/1:21,0:21:19.48:19,0,263	0/1:11,0:10:6.14:6,0,98	0/0:13,0:13:8.60:0,9,270	0/1:16,0:16:7.44:7,0,252	1/1:2,6:7:12.02:226,12,0	1/1:2,8:9:9:169,9,0	0/0:20,0:18:2.12:0,2,315	0/0:17,0:15:20.74:0,21,167	0/1:21,0:18:16.48:16,0,363	0/0:17,0:17:14.52:0,15,431	0/0:12,0:12:9.73:0,10,153	0/1:18,0:16:35.28:35,0,153	0/0:15,0:15:21.72:0,22,405	0/1:11,0:8:2.07:2,0,203	1/1:0,10:10:12.04:229,12,0	0/1:11,0:11:12.07:12,0,286	0/0:20,0:20:45.45:0,45,550	1/1:2,15:17:12.04:173,12,0
chr10	95533131	.	AG	A	3963.43	PASS	AB=0.955;AC=50;AF=0.893;AN=56;BaseQRankSum=-2.924;DP=480;FS=2.586;HRun=1;HaplotypeScore=90.5982;InbreedingCoeff=0.4982;MQ=61.83;MQ0=22;MQRankSum=1.255;QD=10.06;ReadPosRankSum=-0.292;VQSLOD=1.2546;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,1:25:25.81:187,26,0	1/1:8,0:8:8.49:42,8,0	0/0:43,0:17:13.54:0,14,165	0/0:43,0:11:13.41:0,13,179	1/1:23,0:22:37.34:215,37,0	1/1:13,0:14:28.02:227,28,0	1/1:16,3:19:37.27:321,37,0	1/1:36,0:35:79.23:511,79,0	1/1:9,0:7:17.50:111,17,0	1/1:20,1:20:38.35:221,38,0	1/1:18,2:21:52.05:380,52,0	1/1:8,0:7:15.57:82,16,0	1/1:11,0:11:15.89:116,16,0	1/1:11,0:12:9.20:65,9,0	1/1:6,0:6:11.37:57,11,0	1/1:9,0:8:8.49:42,8,0	1/1:12,4:15:25.85:149,26,0	1/1:3,17:18:5.85:156,6,0	0/1:18,0:17:7.15:147,0,7	1/1:12,1:13:7.27:81,7,0	1/1:10,0:10:11.82:79,12,0	1/1:17,0:15:25.83:159,26,0	1/1:14,1:15:27.60:199,28,0	0/1:8,0:8:13.33:42,0,13	1/1:10,0:10:11.50:60,12,0	1/1:9,1:10:14.19:92,14,0	1/1:13,2:15:22.07:176,22,0	1/1:17,0:17:9.84:47,10,0
chr10	95533277	.	CTT	C	5320.93	PASS	AB=0.694;AC=34;AF=0.607;AN=56;BaseQRankSum=-12.263;DP=475;FS=3.403;HRun=12;HaplotypeScore=78.5975;InbreedingCoeff=0.8302;MQ=72.57;MQ0=0;MQRankSum=-0.281;QD=20.31;ReadPosRankSum=1.569;VQSLOD=4.5545;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:36.07:366,36,0	0/1:0,1:9:7.55:8,0,47	0/0:10,0:11:10.89:0,11,67	0/1:14,1:14:4.36:4,0,152	0/0:3,0:28:59.17:0,59,283	1/1:1,23:25:53.89:601,54,0	1/1:2,18:20:48.07:488,48,0	0/0:13,0:47:97.35:0,97,453	0/0:1,0:14:29.94:0,30,105	1/1:1,10:11:30.06:305,30,0	1/1:0,13:13:36.07:366,36,0	1/1:2,13:15:36.07:366,36,0	1/1:1,9:10:21.03:214,21,0	1/1:3,5:9:2.73:83,3,0	0/0:5,0:21:40.64:0,41,190	0/0:3,0:21:39.93:0,40,140	0/0:3,0:18:38.42:0,38,178	0/0:6,0:24:45.43:0,45,193	1/1:4,20:25:62.80:598,63,0	1/1:1,15:16:27:275,27,0	1/1:5,8:13:26.44:285,26,0	1/1:0,9:9:24.04:244,24,0	1/1:1,10:11:27.06:275,27,0	1/1:1,5:6:14.96:140,15,0	0/0:1,0:10:22.97:0,23,115	1/1:3,9:13:29.46:267,29,0	1/1:3,20:23:44.76:439,45,0	0/0:3,1:19:5.44:0,5,100
chr10	95533717	.	TTG	T	1163.27	PASS	AB=0.959;AC=21;AF=0.375;AN=56;BaseQRankSum=-1.995;DP=451;FS=46.355;HRun=0;HaplotypeScore=64.0805;InbreedingCoeff=0.1481;MQ=58.77;MQ0=20;MQRankSum=-5.341;QD=5.41;ReadPosRankSum=-4.655;VQSLOD=-0.7535;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:80.56:0,81,832	0/1:10,0:10:7.18:84,0,7	0/0:36,0:8:7.94:0,8,85	0/0:33,0:8:10.01:0,10,95	1/1:14,0:14:7.27:141,7,0	0/0:21,0:20:5.95:0,6,287	0/0:11,0:11:7.16:0,7,192	1/1:24,3:25:51.56:545,52,0	1/1:7,0:6:3.01:86,3,0	0/1:16,1:17:4.08:4,0,176	0/0:13,0:12:22.81:0,23,171	0/0:10,0:10:14.05:0,14,226	0/1:10,0:10:1.18:1,0,101	0/0:13,0:13:31.77:0,32,276	0/1:14,0:14:10.21:84,0,10	1/1:13,0:13:7.13:136,7,0	0/0:19,0:19:36.13:0,36,196	0/0:14,0:12:25.69:0,26,133	0/1:29,0:26:23.22:23,0,364	0/1:11,1:11:23.24:23,0,132	0/1:6,0:6:7.38:7,0,51	0/1:10,1:11:13.93:14,0,99	0/1:7,3:10:19.88:20,0,121	0/1:10,0:10:2.34:2,0,87	0/1:18,0:15:12.10:103,0,12	0/0:21,1:21:24.29:0,24,335	0/0:15,0:13:20.30:0,20,167	1/1:7,0:3:6.01:57,6,0
chr10	95534206	.	CTG	C	6061.45	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.554;DP=613;FS=0.724;HRun=0;HaplotypeScore=76.6098;InbreedingCoeff=0.9888;MQ=82.21;MQ0=1;MQRankSum=-0.871;QD=36.96;ReadPosRankSum=1.522;VQSLOD=6.4247;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,2295	1/1:0,4:4:12.04:172,12,0	0/0:20,0:20:54.19:0,54,976	0/0:23,0:23:48.96:0,49,860	1/1:1,27:28:69.21:989,69,0	0/0:20,0:20:54.19:0,54,983	0/0:28,0:28:84.29:0,84,1540	1/1:4,19:23:57.19:817,57,0	1/1:2,20:22:54.18:774,54,0	0/0:24,0:24:66.23:0,66,1209	0/0:16,0:16:48.16:0,48,880	0/0:18,0:18:51.17:0,51,934	0/0:21,0:21:63.22:0,63,1155	0/0:25,0:25:75.26:0,75,1372	1/1:1,26:27:66.22:946,66,0	1/1:3,25:28:75.25:1075,75,0	0/0:23,0:23:63.22:0,63,1155	0/0:38,0:38:99:0,114,2072	0/0:18,0:18:48.16:0,48,849	0/0:11,0:11:21.07:0,21,385	0/0:38,0:37:99:0,102,1821	0/0:9,0:9:27.09:0,27,486	0/0:6,0:6:12.04:0,12,220	0/0:17,0:17:48.16:0,48,880	1/1:2,16:18:48.16:688,48,0	0/0:27,0:27:78.23:0,78,1386	0/0:25,0:24:57.15:0,57,992	1/1:0,14:14:42.14:602,42,0
chr10	95539591	.	GA	G	13873.63	PASS	AB=0.538;AC=51;AF=0.911;AN=56;BaseQRankSum=-4.267;DP=570;FS=15.204;HRun=7;HaplotypeScore=59.8381;InbreedingCoeff=0.8296;MQ=84.38;MQ0=0;MQRankSum=-7.111;QD=26.28;ReadPosRankSum=6.260;VQSLOD=3.5707;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:84.19:856,84,0	1/1:0,3:4:11.06:98,11,0	0/0:27,0:27:10.90:0,11,548	0/0:15,0:14:25.25:0,25,248	1/1:2,21:23:60.14:612,60,0	1/1:2,23:25:57.12:581,57,0	0/1:2,12:14:0.88:300,0,1	1/1:2,20:22:57.09:565,57,0	1/1:1,18:19:48.11:489,48,0	1/1:1,21:22:63.12:630,63,0	1/1:4,25:29:72.16:734,72,0	1/1:1,9:10:27.06:275,27,0	1/1:1,22:23:60.13:612,60,0	1/1:2,19:21:45.10:459,45,0	1/1:1,23:24:63.14:642,63,0	1/1:2,18:20:51.11:520,51,0	1/1:1,23:24:63.14:642,63,0	1/1:2,11:13:33.02:325,33,0	1/1:1,19:20:57.12:576,57,0	1/1:1,24:25:72.10:721,72,0	1/1:1,11:12:33.07:336,33,0	1/1:2,11:13:30.06:304,30,0	1/1:1,19:20:51.11:519,51,0	1/1:2,12:14:36.08:367,36,0	1/1:0,23:23:60.14:612,60,0	1/1:3,27:30:81.11:812,81,0	1/1:0,36:36:99:1070,105,0	1/1:0,7:7:21.05:214,21,0
chr10	95540510	.	TG	T	13682.21	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=19.170;DP=673;FS=0.000;HRun=1;HaplotypeScore=100.4808;InbreedingCoeff=0.9997;MQ=85.91;MQ0=1;MQRankSum=-5.657;QD=32.89;ReadPosRankSum=3.519;VQSLOD=4.5554;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.30:0,87,1389	0/0:9,0:9:27.08:0,27,408	0/0:15,0:15:42.14:0,42,670	0/0:30,0:30:87.27:0,87,1354	0/0:25,0:25:72.24:0,72,1138	1/1:4,29:32:90.22:1062,90,0	1/1:0,23:23:66.20:792,66,0	0/0:35,0:35:99:0,105,1645	0/0:17,0:17:51.16:0,51,791	1/1:0,27:27:75.13:867,75,0	1/1:0,25:25:69.21:828,69,0	1/1:1,21:22:63.17:743,63,0	1/1:0,27:27:78.24:936,78,0	1/1:1,22:23:66.20:797,66,0	0/0:39,0:39:99:0,117,1866	0/0:28,0:28:84.26:0,84,1302	1/1:0,23:23:63.19:756,63,0	1/1:1,25:25:66.20:792,66,0	1/1:2,12:14:36.11:432,36,0	1/1:3,38:41:99:1374,117,0	1/1:2,17:19:51.16:612,51,0	1/1:0,26:26:72.22:864,72,0	1/1:0,17:17:45.14:540,45,0	1/1:0,14:14:39.12:468,39,0	0/0:21,0:21:63.18:0,63,957	1/1:0,21:20:57.16:671,57,0	1/1:1,34:35:96.29:1151,96,0	0/0:9,0:9:27.09:0,27,428
chr10	95540877	.	TG	T	24709.24	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=9.702;DP=768;FS=7.518;HRun=1;HaplotypeScore=98.0110;InbreedingCoeff=0.9884;MQ=91.31;MQ0=0;MQRankSum=-7.325;QD=39.10;ReadPosRankSum=4.619;VQSLOD=4.9168;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:74,0:74:99:0,217,3377	1/1:0,9:9:24.08:336,24,0	0/0:30,0:30:90.28:0,90,1357	0/0:32,0:32:90.04:0,90,1351	1/1:0,33:33:96.32:1343,96,0	1/1:0,21:21:60.20:839,60,0	1/1:0,16:16:45.15:629,45,0	1/1:0,30:30:90.24:1201,90,0	1/1:0,14:14:42.14:587,42,0	1/1:0,25:25:75.24:1027,75,0	1/1:0,36:36:99:1381,102,0	1/1:0,23:23:66.22:923,66,0	1/1:0,32:32:87.29:1217,87,0	1/1:0,20:20:48.16:671,48,0	1/1:0,31:31:90.30:1259,90,0	1/1:1,24:25:72.24:997,72,0	1/1:0,20:20:54.18:755,54,0	1/1:1,16:17:39.13:545,39,0	1/1:0,18:18:54.18:752,54,0	1/1:0,32:32:93.27:1279,93,0	1/1:0,33:33:87.29:1217,87,0	1/1:1,25:26:72.20:974,72,0	1/1:0,19:19:54.18:755,54,0	1/1:0,40:40:99:1511,108,0	1/1:0,26:26:69.23:965,69,0	1/1:0,44:44:99:1825,132,0	1/1:0,38:38:99:1552,111,0	1/1:0,4:4:12.04:168,12,0
chr10	95544143	.	ATATTT	A	537.92	PASS	AB=0.964;AC=14;AF=0.259;AN=54;BaseQRankSum=0.709;DP=299;FS=2.686;HRun=0;HaplotypeScore=70.8631;InbreedingCoeff=-0.1128;MQ=77.01;MQ0=7;MQRankSum=0.621;QD=3.76;ReadPosRankSum=1.346;VQSLOD=1.6222;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:15:66.54:67,0,280	0/0:5,0:5:6.72:0,7,68	0/0:25,0:9:18.91:0,19,225	0/1:30,0:14:4.05:4,0,101	0/1:9,0:9:15.17:15,0,54	0/0:15,0:15:3.03:0,3,51	0/0:8,0:7:10.98:0,11,47	0/1:27,0:26:20.26:20,0,211	1/1:3,0:3:5.12:29,5,0	0/1:6,1:7:32.78:46,0,33	0/0:2,0:2:3:0,3,25	0/1:3,0:3:14.63:62,0,15	0/0:6,0:6:5.70:0,6,30	0/0:3,0:2:2.90:0,3,16	1/1:7,0:7:4.26:10,4,0	0/0:6,0:6:2.73:0,3,21	0/0:24,0:24:15.65:0,16,328	0/0:27,0:27:30.21:0,30,229	0/1:9,4:13:99:153,0,169	0/0:10,0:10:18.07:0,18,84	0/0:2,1:3:2.74:0,3,12	./.	0/1:3,0:3:17.46:17,0,37	0/0:3,0:2:0:0,0,0	0/1:9,0:9:2.16:2,0,53	0/1:16,0:16:99:249,0,141	0/0:5,0:5:7.88:0,8,35	0/0:14,0:14:2.60:0,3,25
chr10	95544503	.	CTGCT	C	32170.02	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=8.721;DP=776;FS=0.863;HRun=0;HaplotypeScore=136.5560;InbreedingCoeff=0.9886;MQ=67.45;MQ0=0;MQRankSum=-5.728;QD=47.52;ReadPosRankSum=6.696;VQSLOD=5.2974;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,3514	1/1:0,4:4:12.04:240,12,0	0/0:24,0:22:60.10:0,60,1362	0/0:28,0:27:72.22:0,72,1590	1/1:2,23:25:54.13:1036,54,0	1/1:1,19:20:33.11:658,33,0	1/1:0,27:28:63.22:1256,63,0	1/1:1,18:18:51.13:829,51,0	1/1:0,32:32:84.29:1676,84,0	1/1:1,28:29:81.25:1558,81,0	1/1:2,11:13:33.11:658,33,0	1/1:2,32:34:77.99:1556,78,0	1/1:1,26:27:60.21:1196,60,0	1/1:2,38:40:99:2135,111,0	1/1:0,36:36:81.28:1615,81,0	1/1:0,41:41:99:1976,99,0	1/1:0,35:35:87.21:1693,87,0	1/1:0,15:15:30.10:599,30,0	1/1:0,14:14:42.08:703,42,0	1/1:0,26:26:65.99:1150,66,0	1/1:0,45:45:85.60:1733,86,0	1/1:0,18:18:54.05:991,54,0	1/1:1,19:20:44.98:851,45,0	1/1:2,44:46:99:2035,102,0	1/1:0,27:28:69.24:1376,69,0	1/1:0,33:32:96.33:1897,96,0	1/1:0,38:38:99:2153,108,0	1/1:0,11:11:30.10:599,30,0
chr10	95545788	.	TAA	T	35741.57	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.012;DP=857;FS=0.000;HRun=3;HaplotypeScore=109.6480;InbreedingCoeff=1.0000;MQ=80.62;MQ0=2;MQRankSum=-11.390;QD=44.18;ReadPosRankSum=7.510;VQSLOD=3.7412;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,63:63:99:2731,169,0	1/1:0,17:17:51.17:808,51,0	0/0:23,0:23:69.24:0,69,1368	0/0:25,0:25:69.17:0,69,1321	1/1:0,33:33:99:1534,99,0	1/1:0,25:25:66.23:1077,66,0	1/1:0,39:39:99:1615,99,0	1/1:0,34:34:96.31:1518,96,0	1/1:0,30:30:84.29:1370,84,0	1/1:0,39:39:99:1898,117,0	1/1:0,22:22:57.19:930,57,0	1/1:0,33:33:87.30:1419,87,0	1/1:0,34:34:90.26:1468,90,0	1/1:0,40:40:99:1710,105,0	1/1:0,41:41:99:1710,105,0	1/1:0,47:47:99:1909,117,0	1/1:0,49:48:99:2104,129,0	1/1:0,18:18:51.17:832,51,0	1/1:0,26:26:78.24:1223,78,0	1/1:0,23:23:69.24:1126,69,0	1/1:1,21:22:60.20:979,60,0	1/1:0,29:29:81.75:1321,82,0	1/1:0,19:19:57.19:917,57,0	1/1:0,26:26:75.26:1223,75,0	1/1:0,21:20:42.14:685,42,0	1/1:0,33:33:99:1578,99,0	1/1:0,30:30:81.28:1322,81,0	1/1:0,16:16:45.15:734,45,0
chr10	95547451	.	G	GA	1975.06	PASS	AB=0.663;AC=24;AF=0.429;AN=56;BaseQRankSum=4.116;DP=293;FS=12.401;HRun=2;HaplotypeScore=69.5074;InbreedingCoeff=0.6111;MQ=43.59;MQ0=18;MQRankSum=-1.472;QD=11.69;ReadPosRankSum=-0.555;VQSLOD=0.6100;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:90.23:0,90,1081	0/0:3,0:3:9.02:0,9,104	0/0:3,0:1:2.98:0,3,22	0/0:4,0:2:6.01:0,6,64	0/0:4,0:3:9.03:0,9,111	0/1:5,4:8:2.06:99,0,2	0/1:13,4:16:11.05:237,0,11	0/0:14,0:11:33.02:0,33,374	0/0:10,0:10:27.04:0,27,285	1/1:5,8:11:27.54:325,28,0	1/1:3,11:14:3.66:184,4,0	1/1:4,12:16:20.41:297,20,0	1/1:1,12:13:13.56:183,14,0	1/1:4,4:8:12.17:134,12,0	0/0:12,0:11:30.02:0,30,295	0/0:8,0:7:18.03:0,18,186	0/0:11,0:11:33.09:0,33,381	0/0:8,0:8:21.05:0,21,232	1/1:5,1:4:5.99:59,6,0	1/1:9,5:13:12.58:143,13,0	1/1:9,3:10:7.47:76,7,0	0/1:3,7:10:0.50:43,0,1	0/0:1,1:2:2.04:0,2,6	0/1:3,11:13:6.20:101,0,6	0/0:5,0:5:13.85:0,14,142	1/1:11,6:15:12.61:268,13,0	1/1:0,6:6:0.60:15,1,0	0/0:5,0:5:15.02:0,15,163
chr10	95547729	.	ACACT	A	4145.39	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.944;DP=661;FS=0.427;HRun=0;HaplotypeScore=120.4180;InbreedingCoeff=0.9538;MQ=71.66;MQ0=0;MQRankSum=-1.039;QD=33.16;ReadPosRankSum=2.414;VQSLOD=3.8025;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.20:0,63,1578	1/1:0,4:4:9.03:165,9,0	0/0:42,0:38:73.84:0,74,1667	0/0:55,0:46:74.12:0,74,1431	1/1:1,6:7:9.03:165,9,0	0/0:27,0:27:69.22:0,69,1709	0/0:41,0:41:99:0,117,2667	1/1:4,21:25:63.05:839,63,0	1/1:0,20:20:45.15:826,45,0	0/0:24,0:24:63.19:0,63,1547	0/0:16,0:16:41.96:0,42,944	0/0:22,0:22:60.20:0,60,1500	0/0:30,0:30:87.28:0,87,2228	0/0:30,0:30:78.27:0,78,2030	1/1:5,26:31:60.12:1064,60,0	1/1:3,19:22:48.07:810,48,0	0/0:19,0:19:51.17:0,51,1283	0/0:30,0:30:90.25:0,90,2195	0/0:16,0:16:47.72:0,48,1033	0/0:18,0:18:51.17:0,51,1262	0/0:24,0:24:66.06:0,66,1564	0/0:24,0:24:57.66:0,58,1353	0/0:10,0:10:30.10:0,30,782	0/0:37,0:37:99:0,102,2448	1/1:1,8:9:6.49:111,6,0	0/0:24,0:24:72.22:0,72,1707	0/0:23,0:23:63.15:0,63,1461	1/1:0,7:7:9.03:165,9,0
chr10	95549870	.	G	GA	6185.52	PASS	AB=0.665;AC=46;AF=0.821;AN=56;BaseQRankSum=-3.486;DP=564;FS=6.903;HRun=13;HaplotypeScore=65.4792;InbreedingCoeff=-0.0453;MQ=68.97;MQ0=1;MQRankSum=-0.219;QD=11.05;ReadPosRankSum=-0.472;VQSLOD=4.0688;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,33:41:1.32:436,1,0	1/1:3,1:5:11.53:81,12,0	0/1:14,0:10:9.41:9,0,36	0/0:4,0:4:2.58:0,3,11	1/1:9,19:28:32.30:388,32,0	1/1:4,15:19:24.03:223,24,0	1/1:7,15:23:0.86:283,1,0	1/1:20,8:29:12.07:310,12,0	0/1:3,7:10:3.02:121,0,3	1/1:7,14:21:40.82:356,41,0	1/1:4,10:14:22.98:184,23,0	1/1:10,25:35:17.44:296,17,0	1/1:4,8:12:18.02:167,18,0	1/1:1,20:21:26.98:241,27,0	0/1:9,12:22:1.48:110,0,1	1/1:3,13:16:20.99:187,21,0	0/1:11,20:31:31.09:307,0,31	0/1:6,15:20:31.72:161,0,32	0/1:12,9:21:24.10:203,0,24	1/1:8,8:16:30.87:272,31,0	0/1:6,14:20:34.16:212,0,34	1/1:4,7:12:15.80:127,16,0	1/1:6,16:22:27.72:244,28,0	1/1:3,24:27:30.48:425,30,0	0/1:7,11:18:17.14:143,0,17	1/1:11,21:32:19.55:431,20,0	1/1:4,13:17:15.16:126,15,0	1/1:4,8:12:15.02:139,15,0
chr10	95550627	.	GA	G	8386.59	PASS	AB=0.792;AC=46;AF=0.821;AN=56;BaseQRankSum=2.520;DP=641;FS=3.446;HRun=11;HaplotypeScore=75.5905;InbreedingCoeff=0.7517;MQ=82.85;MQ0=1;MQRankSum=0.505;QD=16.64;ReadPosRankSum=2.567;VQSLOD=5.8737;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:27:64.05:0,64,630	1/1:1,8:10:26.01:203,26,0	0/0:52,1:30:24.81:0,25,197	0/1:33,0:21:19.95:20,0,57	1/1:4,19:23:60.71:485,61,0	1/1:2,22:25:64.95:523,65,0	1/1:2,16:18:41.95:345,42,0	1/1:9,16:25:47.26:372,47,0	1/1:3,16:20:43.93:348,44,0	1/1:7,13:20:38.82:311,39,0	1/1:5,13:20:43.01:331,43,0	1/1:4,14:18:20.81:318,21,0	1/1:5,19:26:55.01:431,55,0	1/1:5,20:25:24.54:397,25,0	1/1:4,25:30:47.87:568,48,0	1/1:2,17:19:47.94:394,48,0	0/0:26,0:27:34.70:0,35,514	0/0:26,3:29:19.87:0,20,614	1/1:9,15:24:44.91:368,45,0	0/1:4,10:14:28.05:204,0,28	1/1:1,8:9:20.96:172,21,0	1/1:5,14:20:44.90:364,45,0	1/1:2,19:21:46.50:374,46,0	1/1:1,7:8:17.97:148,18,0	1/1:2,21:24:49.96:400,50,0	1/1:4,26:31:79.91:642,80,0	1/1:4,25:29:59.93:493,60,0	1/1:3,7:11:23.01:178,23,0
chr10	95552922	.	TGAGGTGAGATGGGC	T	18590.08	PASS	AB=0.806;AC=20;AF=0.357;AN=56;BaseQRankSum=21.420;DP=960;FS=36.053;HRun=0;HaplotypeScore=477.8340;InbreedingCoeff=-0.5714;MQ=81.02;MQ0=0;MQRankSum=-19.359;QD=23.18;ReadPosRankSum=6.305;VQSLOD=1.6730;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,21:56:99:1595,0,6829	0/0:1,0:1:3.01:0,3,217	0/1:27,0:27:99:179,0,3115	0/1:34,0:36:58.20:58,0,3192	0/0:27,0:27:81.28:0,81,5288	0/1:25,16:41:99:1297,0,4956	0/1:23,12:35:99:827,0,4329	0/1:32,9:41:99:799,0,6099	0/0:24,0:24:72.25:0,72,4840	0/1:30,6:36:99:132,0,5428	0/1:18,3:21:99:169,0,3458	0/1:30,27:57:99:2648,0,5622	0/1:32,19:51:99:1341,0,6224	0/1:30,26:56:99:2351,0,5744	0/0:27,0:27:81.28:0,81,5273	0/0:29,0:29:87.27:0,87,5398	0/1:30,11:41:99:906,0,5948	0/1:38,12:50:99:1235,0,7317	0/0:19,0:19:57.18:0,57,3274	0/1:19,4:23:99:170,0,3417	0/1:47,13:60:99:662,0,8166	0/1:19,1:20:55.43:55,0,3885	0/1:17,2:19:61.36:61,0,3328	0/1:35,9:44:99:691,0,6644	0/0:23,0:23:69.24:0,69,4732	0/1:26,26:52:99:1923,0,5181	0/1:22,14:36:99:1490,0,4362	0/0:6,2:8:15.05:0,15,1006
chr10	95553085	.	GTTAACC	G	4810.84	PASS	AB=0.861;AC=13;AF=0.232;AN=56;BaseQRankSum=15.228;DP=1510;FS=26.020;HRun=0;HaplotypeScore=458.3305;InbreedingCoeff=-0.3028;MQ=73.84;MQ0=0;MQRankSum=-9.115;QD=7.13;ReadPosRankSum=-2.448;VQSLOD=1.1963;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:100,2:102:99:0,203,8637	0/0:5,0:5:15.05:0,15,550	0/1:30,5:36:99:315,0,2158	0/1:36,6:44:99:558,0,1682	0/1:43,9:52:99:300,0,3193	0/1:44,4:48:99:164,0,3962	0/1:36,11:47:99:447,0,3162	0/0:56,1:57:88.74:0,89,4701	0/0:42,0:42:99:0,123,4417	0/1:72,11:83:99:667,0,5946	0/1:28,5:33:99:136,0,2263	0/0:63,0:63:99:0,172,5812	0/0:56,1:57:85.92:0,86,5259	0/1:57,5:62:99:185,0,5166	0/0:32,0:32:96.33:0,96,3498	0/0:35,0:35:99:0,102,3413	0/0:83,1:84:99:0,244,7704	0/0:63,0:63:99:0,178,5808	0/0:15,0:15:45.15:0,45,1587	0/1:45,2:47:17.67:18,0,3822	0/0:139,1:140:99:0,315,12070	0/1:40,21:61:99:949,0,3073	0/1:31,14:45:99:480,0,2276	0/0:58,1:59:95.02:0,95,5492	0/0:20,0:20:60.21:0,60,2091	0/1:76,9:85:99:525,0,6363	0/0:59,2:61:24.26:0,24,5102	0/1:26,6:32:66.17:66,0,2446
chr10	95553283	.	AC	A	6505.22	PASS	AB=0.786;AC=18;AF=0.321;AN=56;BaseQRankSum=22.393;DP=1166;FS=21.968;HRun=2;HaplotypeScore=168.3296;InbreedingCoeff=-0.4729;MQ=76.05;MQ0=1;MQRankSum=-15.739;QD=7.39;ReadPosRankSum=-3.195;VQSLOD=0.0633;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:52,31:83:99:644,0,1946	0/0:8,0:8:24.08:0,24,359	0/1:26,2:28:18.67:19,0,779	0/1:26,3:29:11.44:11,0,745	0/0:29,1:30:48.44:0,48,1195	0/1:25,9:34:99:146,0,903	0/1:34,28:62:99:767,0,1223	0/1:29,43:72:99:1321,0,956	0/0:31,0:31:90.29:0,90,1328	0/1:34,18:52:99:552,0,1245	0/1:12,3:15:41.54:42,0,393	0/1:53,23:76:99:423,0,2005	0/1:37,17:54:99:360,0,1425	0/1:41,16:57:99:318,0,1515	0/0:40,0:40:99:0,120,1791	0/0:44,0:44:99:0,132,1958	0/1:50,12:62:99:103,0,1988	0/1:38,8:46:99:140,0,1511	0/0:21,0:21:54.17:0,54,790	0/1:15,5:20:99:104,0,532	0/1:55,23:77:99:488,0,2077	0/1:17,3:20:59.33:59,0,662	0/0:16,1:17:12.28:0,12,656	0/0:49,11:60:37.07:0,37,2034	0/0:25,0:25:75.25:0,75,1123	0/1:36,19:55:99:532,0,1456	0/1:22,15:37:99:475,0,835	0/0:10,0:10:30.10:0,30,449
chr10	95556896	.	C	CTTT	3473.66	PASS	AB=0.773;AC=18;AF=0.321;AN=56;BaseQRankSum=-1.475;DP=547;FS=0.000;HRun=10;HaplotypeScore=115.0505;InbreedingCoeff=0.8077;MQ=66.97;MQ0=7;MQRankSum=-5.959;QD=18.28;ReadPosRankSum=-1.952;VQSLOD=1.3711;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:36:21.39:21,0,46	1/1:4,0:5:11.77:77,12,0	0/0:43,0:19:16.09:0,16,134	0/1:25,0:11:20.85:21,0,40	1/1:4,22:28:59.96:887,60,0	0/0:19,0:19:47.94:0,48,560	0/0:14,0:14:24:0,24,278	1/1:5,18:27:61.11:717,61,0	1/1:3,12:15:20.74:401,21,0	0/0:21,0:21:45.03:0,45,527	0/0:15,0:16:38.74:0,39,417	0/0:14,0:14:30.04:0,30,349	0/0:18,0:18:43.43:0,43,513	0/0:11,0:11:30.07:0,30,352	1/1:3,10:14:21.05:369,21,0	1/1:6,8:15:31.18:500,31,0	0/0:37,0:36:84.22:0,84,1019	0/0:31,0:33:56.94:0,57,638	0/0:22,0:22:42.03:0,42,489	0/0:20,0:20:54.05:0,54,610	0/0:10,0:10:27.08:0,27,328	0/0:7,0:7:15:0,15,182	0/0:14,0:14:27.04:0,27,322	0/0:13,0:13:33.08:0,33,387	1/1:3,12:16:23.93:380,24,0	0/0:23,0:23:51.08:0,51,610	0/0:20,0:21:56.42:0,56,632	1/1:3,1:8:6.02:100,6,0
chr10	95557578	.	CAA	C	3413.52	PASS	AB=0.664;AC=44;AF=0.786;AN=56;BaseQRankSum=-1.422;DP=503;FS=0.000;HRun=17;HaplotypeScore=78.3959;InbreedingCoeff=0.1077;MQ=53.92;MQ0=6;MQRankSum=-1.258;QD=7.11;ReadPosRankSum=0.305;VQSLOD=-0.0300;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,4:25:41.39:77,0,41	0/1:2,4:7:0.16:39,0,0	0/0:14,0:4:8.94:0,9,80	0/0:9,0:4:9.01:0,9,94	1/1:13,13:26:34.62:260,35,0	1/1:5,9:16:23.42:214,23,0	1/1:4,12:20:11.42:172,11,0	1/1:9,13:24:38.16:283,38,0	0/1:8,5:14:11.36:85,0,11	1/1:12,8:21:22.80:203,23,0	1/1:7,7:14:11.57:95,12,0	1/1:13,6:19:11.60:94,12,0	1/1:11,6:17:16.29:116,16,0	1/1:9,5:16:11.30:83,11,0	1/1:4,5:9:5.38:47,5,0	1/1:4,8:13:17.08:130,17,0	0/1:16,7:37:99:181,0,173	0/1:17,4:26:86.69:90,0,87	1/1:11,11:25:18.60:222,19,0	0/1:12,10:22:1.70:140,0,2	1/1:3,5:8:11.89:95,12,0	0/1:7,7:15:15.01:77,0,15	1/1:7,7:15:5.27:124,5,0	1/1:8,5:14:12.08:84,12,0	0/1:8,9:20:5.33:128,0,5	1/1:10,6:21:22.32:180,22,0	1/1:4,9:13:4.72:147,5,0	1/1:6,7:11:5.84:47,6,0
chr10	95558094	.	C	CG	2993.56	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.396;DP=759;FS=0.000;HRun=4;HaplotypeScore=129.9129;InbreedingCoeff=0.9889;MQ=82.80;MQ0=0;MQRankSum=-2.081;QD=34.41;ReadPosRankSum=3.112;VQSLOD=2.1550;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,129,1455	0/0:12,0:12:27.06:0,27,296	0/0:26,0:26:63.15:0,63,693	0/0:17,0:17:48.50:0,49,515	0/0:19,0:19:54.06:0,54,585	0/0:17,0:17:45.13:0,45,510	0/0:29,0:29:72.15:0,72,800	0/0:18,0:18:51.14:0,51,571	0/0:30,0:30:87.21:0,87,971	0/0:25,0:25:69.19:0,69,775	0/0:8,0:8:21.04:0,21,228	0/0:47,0:47:99:0,138,1520	0/0:28,0:28:75.19:0,75,838	0/0:37,0:37:96.23:0,96,1060	0/0:32,0:32:90.20:0,90,996	0/0:18,0:18:51.14:0,51,574	1/1:2,41:42:99:1598,117,0	1/1:2,42:44:99:1517,111,0	0/0:26,0:26:66.19:0,66,747	0/0:5,0:5:15.04:0,15,169	0/0:70,0:70:99:0,193,2151	0/0:22,0:22:57.16:0,57,646	0/0:18,0:18:48.14:0,48,543	0/0:35,0:35:96.27:0,96,1087	0/0:16,0:16:36.10:0,36,408	0/0:31,0:31:87.25:0,87,982	0/0:28,0:28:81.15:0,81,876	0/0:11,0:11:30.08:0,30,333
chr10	95559276	.	CAA	C	1720.91	PASS	AB=0.703;AC=28;AF=0.500;AN=56;BaseQRankSum=-1.512;DP=507;FS=6.543;HRun=16;HaplotypeScore=71.5738;InbreedingCoeff=0.7428;MQ=50.23;MQ0=34;MQRankSum=6.848;QD=7.14;ReadPosRankSum=5.182;VQSLOD=0.2188;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:31:49.34:0,49,324	0/0:4,0:8:15.03:0,15,159	0/0:11,0:5:1.17:0,1,17	0/0:7,0:6:14.31:0,14,102	0/0:13,0:16:23.60:0,24,232	1/1:8,8:17:8.71:117,9,0	1/1:13,10:22:32.26:248,32,0	0/0:34,0:40:73.28:0,73,723	0/0:16,0:15:19.84:0,20,212	1/1:8,6:14:7.46:113,7,0	1/1:5,2:8:1.24:43,1,0	1/1:8,18:27:27.41:276,27,0	1/1:0,5:5:14.98:125,15,0	1/1:10,5:15:4.96:77,5,0	0/0:14,0:23:39.02:0,39,404	0/0:28,0:31:73.94:0,74,806	0/0:14,0:17:30.44:0,30,322	0/0:17,0:25:42.03:0,42,436	1/1:11,5:13:10.35:121,10,0	0/1:6,5:10:2.48:77,0,2	1/1:6,10:17:4.88:132,5,0	1/1:5,6:9:8.86:75,9,0	0/1:11,6:14:4.48:77,0,4	1/1:8,10:17:27.02:246,27,0	0/0:9,0:13:16.85:0,17,167	1/1:8,5:14:11.51:129,12,0	1/1:7,7:14:8.29:69,8,0	0/0:9,0:11:10.83:0,11,89
chr10	95559958	.	G	GC	6767.39	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-15.596;DP=662;FS=1.045;HRun=4;HaplotypeScore=77.7825;InbreedingCoeff=0.9997;MQ=75.33;MQ0=0;MQRankSum=0.641;QD=37.60;ReadPosRankSum=2.126;VQSLOD=4.6205;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,1374	1/1:2,12:14:33.08:431,33,0	0/0:20,0:20:53.96:0,54,576	0/0:22,0:22:46.19:0,46,521	1/1:0,23:23:66.22:902,66,0	0/0:10,0:10:27.08:0,27,306	0/0:30,0:30:84.22:0,84,942	1/1:4,21:25:66.21:884,66,0	1/1:0,21:21:60.20:819,60,0	0/0:29,0:29:84.24:0,84,952	0/0:11,0:11:33.09:0,33,374	0/0:41,0:41:99:0,114,1293	0/0:20,0:20:60.17:0,60,680	0/0:23,0:23:66.19:0,66,749	1/1:2,18:20:48.16:656,48,0	1/1:0,28:28:84.28:1148,84,0	0/0:31,0:31:84.24:0,84,953	0/0:22,0:23:51.78:0,52,656	0/0:19,0:19:45.10:0,45,493	0/0:20,0:20:57.16:0,57,646	0/0:29,0:29:84.24:0,84,952	0/0:20,0:20:54.15:0,54,612	0/0:14,0:14:39.11:0,39,442	0/0:29,0:29:81.22:0,81,908	1/1:0,27:27:78.26:1066,78,0	0/0:29,0:29:84.21:0,84,934	0/0:18,0:18:54.15:0,54,612	1/1:0,22:22:63.21:861,63,0
chr10	95559978	.	TGA	T	3896.77	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.406;DP=652;FS=7.093;HRun=0;HaplotypeScore=96.7411;InbreedingCoeff=0.9995;MQ=75.23;MQ0=0;MQRankSum=-2.296;QD=42.82;ReadPosRankSum=0.795;VQSLOD=5.2716;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:41:99:1691,111,0	0/0:13,0:13:36.12:0,36,674	0/0:18,0:18:45.15:0,45,855	0/0:23,0:22:60.10:0,60,1064	0/0:28,0:28:84.29:0,84,1592	0/0:9,0:9:27.09:0,27,521	0/0:28,0:28:81.28:0,81,1556	0/0:26,0:25:72.24:0,72,1345	0/0:21,0:21:60.21:0,60,1139	0/0:26,0:26:75.26:0,75,1449	0/0:13,0:13:39.13:0,39,752	0/0:40,0:40:99:0,120,2277	0/0:20,0:20:60.21:0,60,1158	0/0:20,0:20:60.21:0,60,1159	0/0:20,0:20:57.20:0,57,1083	0/0:31,0:31:93.30:0,93,1762	1/1:0,30:30:87.30:1333,87,0	1/1:0,20:20:57.19:873,57,0	0/0:21,0:21:63.22:0,63,1212	0/0:21,0:21:54.19:0,54,1036	0/0:29,0:29:78.27:0,78,1497	0/0:24,0:24:69.21:0,69,1297	0/0:12,0:12:33.11:0,33,637	0/0:30,0:30:90.31:0,90,1726	0/0:26,0:25:75.26:0,75,1436	0/0:27,0:27:81.28:0,81,1564	0/0:18,0:18:54.19:0,54,1043	0/0:17,0:17:51.17:0,51,985
chr10	95565343	.	G	GA	12030.57	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-18.565;DP=942;FS=0.260;HRun=1;HaplotypeScore=82.6708;InbreedingCoeff=1.0000;MQ=83.10;MQ0=0;MQRankSum=-2.858;QD=41.20;ReadPosRankSum=0.634;VQSLOD=5.1694;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,55:58:99:2272,154,0	1/1:0,16:16:48.16:719,48,0	0/0:27,0:27:81.25:0,81,1028	0/0:27,0:27:63.17:0,63,784	1/1:0,24:24:69.19:1008,69,0	0/0:33,0:32:96.27:0,96,1202	0/0:37,0:37:99:0,108,1376	1/1:1,30:31:90.29:1330,90,0	1/1:0,37:37:99:1528,102,0	0/0:32,0:32:90.28:0,90,1157	0/0:34,0:34:99:0,99,1284	0/0:47,0:47:99:0,141,1814	0/0:49,0:49:99:0,144,1866	0/0:33,0:33:96.31:0,96,1247	1/1:2,51:53:99:2069,138,0	1/1:1,36:37:99:1574,105,0	0/0:34,0:34:93.30:0,93,1206	0/0:25,0:25:75.24:0,75,974	0/0:26,0:26:66.21:0,66,855	0/0:37,0:37:99:0,108,1325	0/0:63,0:63:99:0,187,2415	0/0:16,0:16:48.13:0,48,594	0/0:23,0:23:66.21:0,66,855	0/0:42,0:42:99:0,123,1597	1/1:0,22:22:60.20:900,60,0	0/0:40,0:40:99:0,114,1480	0/0:25,0:25:75.24:0,75,974	1/1:0,14:14:42.14:629,42,0
chr10	95566165	.	T	TAA	1850.90	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.381;DP=539;FS=23.291;HRun=11;HaplotypeScore=65.4799;InbreedingCoeff=0.9033;MQ=69.57;MQ0=2;MQRankSum=-0.395;QD=29.85;ReadPosRankSum=0.730;VQSLOD=2.2994;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:63.02:0,63,611	0/0:6,0:6:14.89:0,15,131	0/0:14,0:13:17.30:0,17,110	0/0:17,0:14:5.93:0,6,105	0/0:17,0:18:47.81:0,48,448	0/0:22,0:22:45.01:0,45,436	0/0:21,0:21:51.01:0,51,495	0/0:37,0:38:83.97:0,84,850	0/0:15,0:16:44.80:0,45,419	0/0:27,0:27:60.06:0,60,575	0/0:12,0:12:29.99:0,30,285	0/0:21,0:21:47.99:0,48,449	0/0:9,0:10:17.93:0,18,224	0/0:22,0:22:53.76:0,54,495	0/0:22,0:22:50.96:0,51,479	0/0:17,0:17:45.06:0,45,436	1/1:5,33:41:95.29:1321,95,0	1/1:1,20:20:45.15:652,45,0	0/0:14,0:16:26.68:0,27,290	0/0:8,0:8:18.02:0,18,175	0/0:20,0:20:47.19:0,47,464	0/0:14,0:14:30.03:0,30,291	0/0:11,0:11:27.01:0,27,262	0/0:22,0:23:59.78:0,60,557	0/0:8,0:9:9.51:0,10,198	0/0:22,0:22:57.04:0,57,546	0/0:23,0:23:50.99:0,51,488	0/0:15,0:16:41.75:0,42,390
chr10	95568951	.	CA	C	686.20	PASS	AB=0.809;AC=18;AF=0.321;AN=56;BaseQRankSum=-0.363;DP=613;FS=5.791;HRun=17;HaplotypeScore=95.7561;InbreedingCoeff=0.6637;MQ=50.41;MQ0=13;MQRankSum=8.211;QD=2.51;ReadPosRankSum=7.103;VQSLOD=-0.2948;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,22:46:2.82:180,3,0	1/1:1,4:9:17.72:84,18,0	0/0:15,0:7:5.23:0,5,54	0/0:12,0:7:5.74:0,6,39	0/1:14,8:23:3.78:61,0,4	0/0:10,0:19:23.33:0,23,140	0/0:16,0:20:23.50:0,23,129	0/1:34,1:33:2.93:3,0,262	1/1:12,5:17:23.39:116,23,0	0/0:15,0:25:63.46:0,63,366	0/0:11,0:17:15.38:0,15,83	0/0:17,0:28:29.37:0,29,184	0/0:15,0:23:29.33:0,29,177	0/0:26,0:26:54.60:0,55,325	1/1:17,12:29:19:105,19,0	1/1:15,5:22:19.44:95,19,0	1/1:18,0:39:11.40:68,11,0	1/1:7,2:19:21.83:79,22,0	0/0:26,0:26:44.23:0,44,290	0/0:16,0:17:26.07:0,26,138	0/0:3,0:5:6.33:0,6,36	0/0:13,0:15:22.45:0,22,132	0/0:9,0:15:20.10:0,20,106	0/0:9,0:9:14.94:0,15,86	0/1:8,6:13:2.46:66,0,2	0/0:28,0:30:59.86:0,60,346	0/0:26,0:26:55.58:0,56,327	0/1:8,2:11:18.71:19,0,47
chr10	95569507	.	TTGTGTG	T	2306.32	PASS	AB=0.867;AC=33;AF=0.688;AN=48;BaseQRankSum=4.752;DP=737;FS=26.178;HRun=0;HaplotypeScore=173.4369;InbreedingCoeff=0.0429;MQ=62.76;MQ0=12;MQRankSum=-1.560;QD=4.31;ReadPosRankSum=-0.373;VQSLOD=1.2038;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:43:14.97:152,15,0	1/1:6,1:9:5.79:66,6,0	./.	./.	1/1:18,19:37:13.72:139,14,0	./.	1/1:25,0:36:2.28:41,2,0	0/1:27,0:27:11.13:14,0,11	0/1:14,14:29:28.90:455,0,29	0/1:26,0:24:18.81:19,0,26	0/0:7,0:12:3:0,3,25	0/1:25,0:37:11.49:75,0,11	1/1:16,0:25:9.03:124,9,0	1/1:17,0:24:3.67:80,4,0	1/1:21,11:32:27.03:468,27,0	1/1:21,17:38:17.95:319,18,0	1/1:22,0:34:3.01:42,3,0	0/1:19,0:22:21.15:49,0,21	0/1:26,0:26:17.62:19,0,18	./.	0/0:53,0:52:8.96:0,9,78	0/0:21,0:26:5.53:0,6,49	1/1:10,0:12:2.74:12,3,0	0/0:18,0:25:2.06:0,2,22	1/1:11,10:21:2.87:60,3,0	0/1:19,0:27:19.81:132,0,20	1/1:19,0:25:9.03:126,9,0	1/1:2,2:3:3.01:60,3,0
chr10	95570877	.	G	GT	4856.80	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-8.021;DP=606;FS=4.813;HRun=9;HaplotypeScore=80.2086;InbreedingCoeff=0.9511;MQ=64.12;MQ0=2;MQRankSum=-0.515;QD=23.13;ReadPosRankSum=1.521;VQSLOD=5.7702;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:71.92:0,72,615	1/1:3,5:8:15.04:166,15,0	0/0:15,0:10:23.93:0,24,201	0/0:25,0:20:15.14:0,15,239	1/1:3,31:34:93.16:992,93,0	0/0:25,0:25:68.91:0,69,590	0/0:18,0:18:47.98:0,48,415	1/1:8,17:24:1.97:467,2,0	1/1:2,9:11:24.06:265,24,0	0/0:35,0:35:86.94:0,87,750	0/0:18,0:18:44.96:0,45,386	0/0:17,0:17:50.96:0,51,435	0/0:17,0:17:44.95:0,45,384	0/0:21,0:21:56.95:0,57,489	1/1:2,19:21:35.93:398,36,0	1/1:3,12:15:7.12:306,7,0	1/1:5,19:24:48.13:531,48,0	1/1:6,34:40:61.18:902,61,0	0/0:23,0:22:47.91:0,48,401	0/0:26,0:26:71.93:0,72,614	0/0:15,0:15:35.98:0,36,310	0/0:13,0:13:29.99:0,30,260	0/0:21,0:21:53.98:0,54,469	0/0:22,0:22:59.89:0,60,503	1/1:4,14:18:33.09:365,33,0	0/0:30,0:30:63.35:0,63,627	0/0:26,0:26:74.97:0,75,647	1/1:0,14:14:42.11:465,42,0
chr10	95572942	.	TCTTC	T	6805.68	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=10.748;DP=638;FS=0.357;HRun=0;HaplotypeScore=117.2340;InbreedingCoeff=0.9148;MQ=72.43;MQ0=1;MQRankSum=-2.874;QD=36.39;ReadPosRankSum=0.671;VQSLOD=4.7814;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.22:0,78,1853	1/1:0,9:9:24:379,24,0	0/0:25,0:23:55.47:0,55,1037	0/0:14,0:15:40.29:0,40,781	1/1:1,31:32:86.93:1337,87,0	0/0:28,0:28:81.22:0,81,1934	0/0:18,0:18:51.14:0,51,1194	1/1:3,22:25:66.12:1045,66,0	1/1:1,19:20:41.91:795,42,0	0/0:33,0:33:93.30:0,93,2254	0/0:18,0:18:45.12:0,45,1087	0/0:25,0:25:72.21:0,72,1730	0/0:30,0:30:87.25:0,87,2086	0/0:17,0:17:42.12:0,42,1005	1/1:2,22:24:54.19:1023,54,0	1/1:1,26:27:45.15:851,45,0	0/1:20,0:20:99:102,0,533	0/0:36,0:36:28.60:0,29,1417	0/0:26,0:26:75.21:0,75,1657	0/0:28,0:28:84.25:0,84,1976	0/0:19,0:19:51.12:0,51,1117	0/0:22,0:22:63.18:0,63,1461	0/0:11,0:11:33.10:0,33,824	0/0:25,0:25:66.20:0,66,1615	1/1:0,19:19:42.14:795,42,0	0/0:22,0:22:63.20:0,63,1529	0/0:25,0:25:72.19:0,72,1622	1/1:2,9:11:27.09:476,27,0
chr10	95574074	.	CTCTT	C	8165.82	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=6.728;DP=622;FS=10.022;HRun=0;HaplotypeScore=132.2936;InbreedingCoeff=0.9984;MQ=75.57;MQ0=1;MQRankSum=-11.710;QD=53.72;ReadPosRankSum=-1.176;VQSLOD=5.4771;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.29:0,84,2288	1/1:0,9:9:27.09:523,27,0	0/0:10,0:10:29.69:0,30,721	0/0:18,0:18:48.16:0,48,1298	1/1:0,24:24:60.21:1162,60,0	0/0:21,0:21:57.18:0,57,1505	0/0:19,0:19:54.19:0,54,1475	1/1:0,30:30:87.28:1634,87,0	1/1:0,16:16:45.15:872,45,0	0/0:29,0:29:84.29:0,84,2278	0/0:15,0:15:45.15:0,45,1233	0/0:32,0:31:90.09:0,90,2316	0/0:34,0:34:99:0,99,2699	0/0:20,0:20:51.17:0,51,1397	1/1:2,19:21:57.20:1104,57,0	1/1:4,21:25:72.25:1393,72,0	0/0:35,0:35:93.32:0,93,2547	0/0:14,0:14:42.14:0,42,1150	0/0:23,0:23:69.24:0,69,1891	0/0:20,0:20:57.20:0,57,1560	0/0:22,0:22:60.21:0,60,1643	0/0:22,0:22:62.75:0,63,1582	0/0:20,0:20:51.09:0,51,1396	0/0:21,0:21:63.22:0,63,1725	1/1:1,19:20:60.19:1130,60,0	0/0:36,0:36:99:0,102,2578	0/0:30,0:30:78.26:0,78,2100	1/1:1,6:7:18.06:349,18,0
chr10	95574115	.	GAA	G	9745.71	PASS	AB=0.561;AC=45;AF=0.804;AN=56;BaseQRankSum=-6.697;DP=623;FS=5.785;HRun=13;HaplotypeScore=110.1866;InbreedingCoeff=0.8364;MQ=63.18;MQ0=2;MQRankSum=1.373;QD=19.15;ReadPosRankSum=5.254;VQSLOD=4.0770;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:41:69.76:0,70,321	1/1:2,8:11:17.94:224,18,0	0/0:14,0:11:14.74:0,15,104	0/0:8,0:5:3.01:0,3,40	1/1:10,12:23:38.48:353,38,0	1/1:1,17:18:42.05:407,42,0	1/1:4,16:20:42.05:407,42,0	0/0:15,0:38:61.45:0,61,255	1/1:6,11:17:38.72:349,39,0	1/1:4,24:29:39.53:623,40,0	1/1:4,15:20:18.73:325,19,0	1/1:5,21:25:56.99:550,57,0	1/1:4,22:26:59.91:582,60,0	1/1:4,14:18:33.03:320,33,0	1/1:2,14:16:39.01:378,39,0	1/1:4,19:23:54.06:523,54,0	1/1:7,26:33:63.90:610,64,0	1/1:3,18:21:48.05:466,48,0	1/1:6,19:25:34.57:514,35,0	1/1:7,9:18:26.01:292,26,0	1/1:4,16:20:25.25:259,25,0	1/1:4,17:22:11.82:342,12,0	0/1:5,17:23:12.17:278,0,12	1/1:3,17:20:38.88:428,39,0	1/1:4,17:22:23.19:383,23,0	1/1:7,24:32:55.71:637,56,0	1/1:2,24:26:50.98:495,51,0	0/0:3,0:13:25.43:0,25,98
chr10	95574920	.	CTT	C	1377.80	PASS	AB=0.633;AC=14;AF=0.250;AN=56;BaseQRankSum=2.627;DP=556;FS=0.488;HRun=16;HaplotypeScore=79.5121;InbreedingCoeff=0.7958;MQ=75.95;MQ0=3;MQRankSum=0.743;QD=9.57;ReadPosRankSum=4.319;VQSLOD=1.8584;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:39:89.89:0,90,878	1/1:3,6:9:17.91:150,18,0	0/0:25,0:18:15.31:0,15,90	0/0:20,0:15:21.29:0,21,147	1/1:13,12:26:37.89:285,38,0	0/0:9,0:12:20.40:0,20,206	0/0:16,0:16:31.16:0,31,304	1/1:15,9:26:27.38:205,27,0	0/1:8,16:24:12.10:236,0,12	0/0:21,0:21:43.69:0,44,387	0/0:19,0:23:25.24:0,25,303	0/0:18,0:21:10.61:0,11,271	0/0:16,0:15:36.05:0,36,401	0/0:11,0:13:23.95:0,24,223	0/1:7,7:14:4.59:128,0,5	1/1:9,11:21:31.60:274,32,0	0/0:32,0:35:77.88:0,78,816	0/0:25,0:28:61.74:0,62,615	0/0:17,0:18:30.70:0,31,349	0/0:17,0:23:44.81:0,45,428	0/0:14,0:14:33.47:0,33,369	0/0:15,0:15:32.66:0,33,371	0/0:11,0:15:19.83:0,20,198	0/0:10,0:11:11.36:0,11,95	1/1:4,12:17:13.58:207,14,0	0/0:22,0:23:33.98:0,34,418	0/0:17,0:23:41.30:0,41,436	1/1:0,4:6:5.70:78,6,0
chr10	95576514	.	A	AAAAT	2592.65	PASS	AB=1.000;AC=35;AF=0.833;AN=42;BaseQRankSum=-3.589;DP=235;FS=3.206;HRun=0;HaplotypeScore=33.3115;InbreedingCoeff=0.4754;MQ=45.35;MQ0=30;MQRankSum=-0.770;QD=13.72;ReadPosRankSum=-1.102;VQSLOD=2.1621;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:13:12.01:0,12,112	1/1:6,2:9:3.01:70,3,0	./.	./.	1/1:12,0:9:3.01:57,3,0	1/1:4,0:4:3.01:69,3,0	./.	1/1:32,0:24:11.95:108,12,0	./.	1/1:6,1:7:6.02:140,6,0	1/1:8,1:8:3.48:71,3,0	0/0:2,0:2:3:0,3,28	1/1:4,0:6:6.02:83,6,0	1/1:3,2:5:6.02:140,6,0	1/1:3,4:7:9.03:210,9,0	./.	1/1:18,7:21:12.04:267,12,0	1/1:8,8:15:21.07:491,21,0	1/1:1,2:2:6.02:100,6,0	1/1:7,0:7:1.25:3,1,0	1/1:2,1:1:3.01:70,3,0	./.	0/1:8,0:8:0:0,0,0	./.	0/0:7,0:7:12.04:0,12,184	1/1:5,2:7:6.02:131,6,0	1/1:7,7:13:15.05:351,15,0	1/1:7,5:8:15.05:351,15,0
chr10	95577315	.	TTGTGTGTG	T	5896.37	PASS	AB=0.870;AC=34;AF=0.654;AN=52;BaseQRankSum=1.552;DP=546;FS=0.855;HRun=0;HaplotypeScore=135.5643;InbreedingCoeff=0.4830;MQ=57.41;MQ0=24;MQRankSum=3.666;QD=16.61;ReadPosRankSum=0.958;VQSLOD=4.0239;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:10.34:383,10,0	1/1:9,1:10:12.04:172,12,0	0/0:27,0:15:8.92:0,9,165	0/0:26,0:13:9.01:0,9,149	1/1:14,0:15:19.61:229,20,0	./.	1/1:9,9:16:2.49:75,2,0	0/1:23,2:31:0.90:326,0,1	0/1:12,0:13:75.78:273,0,76	1/1:12,4:16:15.05:374,15,0	1/1:5,4:10:3.01:70,3,0	1/1:10,13:21:6.61:126,7,0	1/1:5,17:22:11.95:281,12,0	./.	1/1:20,1:21:36.53:455,37,0	1/1:17,0:19:27.06:311,27,0	0/0:27,0:26:47.71:0,48,755	0/0:15,0:14:27.06:0,27,529	0/1:13,5:16:1.93:312,0,2	1/1:11,10:21:15.01:274,15,0	0/0:17,14:29:3.48:0,3,82	0/0:8,7:14:0.13:0,0,0	0/0:8,7:17:3.12:0,3,21	1/1:21,0:20:41.69:986,42,0	1/1:20,0:20:6.10:310,6,0	1/1:10,12:21:36.09:756,36,0	1/1:8,6:14:5.97:84,6,0	0/1:7,0:6:32.89:101,0,33
chr10	95577348	.	TGAGAGAGAGA	T	185.37	PASS	AB=1.000;AC=12;AF=0.240;AN=50;BaseQRankSum=2.054;DP=537;FS=13.899;HRun=0;HaplotypeScore=163.0782;InbreedingCoeff=0.3102;MQ=47.54;MQ0=33;MQRankSum=0.047;QD=1.11;ReadPosRankSum=-2.230;VQSLOD=1.8763;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:30:12.53:13,0,68	0/0:5,4:7:0.47:0,0,1	./.	./.	1/1:10,4:15:1.23:3,1,0	0/0:19,0:17:0.47:0,0,1	0/0:27,0:24:8.73:0,9,256	0/0:34,0:32:2.03:0,2,5	0/0:11,1:15:0:0,0,0	0/0:15,0:15:26.45:0,26,741	./.	0/0:25,0:22:15.02:0,15,574	0/0:30,0:30:18.21:0,18,563	0/0:17,0:16:6.02:0,6,178	1/1:18,5:23:0.86:2,1,0	0/0:13,7:20:0.47:0,0,1	0/0:20,0:25:6.92:0,7,93	0/1:19,0:16:99:184,0,105	0/0:13,0:11:17.99:0,18,405	0/0:13,0:13:2.13:0,2,5	0/0:31,0:28:15.48:0,15,546	0/1:14,0:13:0:0,0,0	1/1:18,0:18:0.47:1,0,0	0/1:36,0:33:6.98:7,0,939	0/0:12,1:12:0.89:0,1,2	0/0:22,0:21:16.58:0,17,498	0/0:17,0:16:15.05:0,15,453	1/1:6,0:6:3.01:77,3,0
chr10	95578403	.	TA	T	719.08	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.221;DP=550;FS=0.000;HRun=3;HaplotypeScore=54.0914;InbreedingCoeff=0.9967;MQ=78.66;MQ0=0;MQRankSum=-2.656;QD=32.69;ReadPosRankSum=1.549;VQSLOD=3.8279;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:66.21:814,66,0	0/0:10,0:10:30.03:0,30,328	0/0:19,0:18:46.48:0,46,555	0/0:14,0:14:36.03:0,36,419	0/0:30,0:30:86.78:0,87,1148	0/0:19,0:19:57.12:0,57,687	0/0:16,0:16:45.11:0,45,563	0/0:37,0:37:99:0,102,1277	0/0:19,0:19:51.15:0,51,660	0/0:18,0:18:54.17:0,54,706	0/0:22,0:22:66.19:0,66,859	0/0:18,0:18:50.98:0,51,635	0/0:18,0:18:51.12:0,51,631	0/0:13,0:13:33.10:0,33,433	0/0:31,0:31:93.25:0,93,1188	0/0:16,0:16:48.12:0,48,606	0/0:27,0:27:75.17:0,75,948	0/0:13,0:13:33:0,33,377	0/0:18,0:18:54.13:0,54,649	0/0:17,0:17:48.08:0,48,613	0/0:15,0:15:42.09:0,42,521	0/0:17,0:17:51.16:0,51,670	0/0:14,0:14:42.12:0,42,540	0/0:20,0:20:60.20:0,60,815	0/0:22,0:22:63.66:0,64,827	0/0:28,0:28:82.46:0,82,998	0/0:27,0:26:81.24:0,81,1058	0/0:10,0:10:24.05:0,24,292
chr10	95579394	.	CT	C	4524.46	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=-2.580;DP=253;FS=4.617;HRun=10;HaplotypeScore=26.4745;InbreedingCoeff=0.5439;MQ=69.05;MQ0=14;MQRankSum=-2.159;QD=19.34;ReadPosRankSum=1.705;VQSLOD=4.7630;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,7:9:19.55:160,20,0	1/1:1,5:5:15:130,15,0	0/0:9,0:7:3.18:0,3,105	0/0:10,0:8:17.08:0,17,172	1/1:0,10:10:29.99:260,30,0	1/1:0,9:9:24:208,24,0	1/1:1,3:3:9:78,9,0	1/1:8,30:38:53.78:692,54,0	1/1:1,2:2:6:52,6,0	1/1:0,7:7:21:182,21,0	1/1:0,5:5:8.99:78,9,0	1/1:0,5:5:12:104,12,0	1/1:0,4:4:12:104,12,0	1/1:1,5:5:12:104,12,0	1/1:1,4:4:12:104,12,0	1/1:0,3:3:9:78,9,0	1/1:5,19:20:47.98:417,48,0	1/1:7,24:30:22.36:413,22,0	1/1:5,12:16:38.01:314,38,0	1/1:0,6:6:18:156,18,0	1/1:0,1:1:3:26,3,0	./.	1/1:0,2:2:6:52,6,0	1/1:1,2:3:3:26,3,0	1/1:1,10:11:32.37:268,32,0	1/1:1,12:13:38.97:334,39,0	1/1:3,6:7:14.99:130,15,0	1/1:0,2:2:6:52,6,0
chr10	95579790	.	AT	A	584.87	PASS	AB=0.935;AC=6;AF=0.107;AN=56;BaseQRankSum=6.109;DP=527;FS=0.675;HRun=10;HaplotypeScore=53.1865;InbreedingCoeff=0.6676;MQ=79.74;MQ0=1;MQRankSum=-1.004;QD=8.60;ReadPosRankSum=1.787;VQSLOD=1.7081;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:96.23:0,96,1042	0/0:10,0:10:27.07:0,27,299	0/0:28,0:20:42.32:0,42,396	0/1:23,1:19:4.24:4,0,274	0/0:27,0:27:69.18:0,69,755	0/0:23,0:23:63.14:0,63,684	0/0:12,0:13:35.93:0,36,379	0/0:30,0:30:78.19:0,78,844	0/0:20,0:20:48.13:0,48,531	0/0:16,0:16:48.13:0,48,531	0/0:10,0:10:24.06:0,24,265	0/0:17,0:17:45.11:0,45,490	0/0:19,0:19:57.15:0,57,623	0/0:17,0:17:33.09:0,33,364	0/0:24,0:24:46.04:0,46,695	0/0:12,0:12:33.07:0,33,356	1/1:2,23:25:56.99:495,57,0	1/1:1,8:9:23.99:208,24,0	0/0:32,0:32:84.20:0,84,908	0/0:22,0:22:52.01:0,52,623	0/1:9,1:10:2:2,0,200	0/0:16,0:17:50.96:0,51,538	0/0:8,0:8:18.04:0,18,192	0/0:14,0:14:42.11:0,42,465	0/0:11,0:11:33.07:0,33,350	0/0:28,0:28:81.21:0,81,889	0/0:21,0:20:60.13:0,60,641	0/0:3,0:3:3.01:0,3,33
chr10	95582965	.	ATAG	A	726.93	PASS	AB=0.982;AC=9;AF=0.167;AN=54;BaseQRankSum=4.140;DP=480;FS=22.547;HRun=0;HaplotypeScore=58.2614;InbreedingCoeff=0.2448;MQ=62.06;MQ0=48;MQRankSum=-7.432;QD=5.05;ReadPosRankSum=-3.433;VQSLOD=-0.4341;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:71.23:0,71,1277	0/0:3,0:1:3.01:0,3,47	0/0:40,0:11:31.59:0,32,385	0/0:30,0:17:15.20:0,15,345	0/0:17,2:19:40.21:0,40,613	0/1:26,0:25:2.03:2,0,805	0/0:11,0:9:0.82:0,1,306	0/0:19,0:17:34.17:0,34,579	0/0:11,0:11:21.93:0,22,297	0/1:30,0:24:49.95:50,0,620	0/1:17,0:16:99:113,0,212	0/0:15,0:13:31.53:0,32,502	0/0:5,0:5:10.87:0,11,179	0/0:13,0:13:28.53:0,29,473	0/0:12,0:11:26.44:0,26,411	0/0:11,0:9:24.08:0,24,386	1/1:18,0:17:43.39:606,43,0	1/1:2,18:19:6.01:67,6,0	0/0:21,0:11:31.02:0,31,460	0/0:17,0:16:19.54:0,20,578	0/1:9,1:8:16.24:16,0,187	0/0:8,0:7:17.79:0,18,270	0/0:14,0:13:15.02:0,15,413	./.	0/0:14,0:14:35.90:0,36,516	0/0:21,0:20:4.77:0,5,760	0/1:23,0:22:9.55:10,0,539	0/0:15,0:11:18.15:0,18,358
chr10	95585203	.	C	CT	3742.11	PASS	AB=0.889;AC=17;AF=0.304;AN=56;BaseQRankSum=7.178;DP=615;FS=0.000;HRun=9;HaplotypeScore=74.6249;InbreedingCoeff=0.9124;MQ=66.27;MQ0=2;MQRankSum=0.108;QD=20.12;ReadPosRankSum=1.250;VQSLOD=4.0777;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:42:99:0,104,891	1/1:1,12:13:27.07:296,27,0	0/0:20,0:9:14.57:0,15,98	0/0:22,0:15:28.32:0,28,218	1/1:6,24:30:39.98:627,40,0	0/0:26,0:25:62.92:0,63,533	0/0:15,0:15:38.94:0,39,328	1/1:9,17:26:51.09:528,51,0	1/1:2,22:23:42.10:465,42,0	0/0:26,0:26:56.93:0,57,485	0/0:22,0:22:53.97:0,54,469	0/0:19,0:19:47.96:0,48,414	0/0:19,0:19:50.90:0,51,424	0/0:23,1:24:29.79:0,30,470	1/1:1,26:27:49.68:680,50,0	1/1:2,9:12:23.90:247,24,0	0/0:35,0:35:92.85:0,93,784	0/0:23,0:23:56.94:0,57,485	0/0:22,0:22:49.94:0,50,411	0/0:20,0:20:50.78:0,51,415	0/0:6,0:6:18:0,18,156	0/0:13,0:13:29.98:0,30,258	0/0:23,0:23:53.65:0,54,453	0/0:28,0:28:74.91:0,75,639	1/1:4,16:20:16.06:405,16,0	0/0:24,0:24:22.36:0,22,398	0/1:7,1:8:12.20:12,0,132	1/1:7,19:26:25.03:482,25,0
chr10	95585526	.	A	ATG	6870.45	PASS	AB=0.634;AC=19;AF=0.339;AN=56;BaseQRankSum=14.155;DP=824;FS=1.886;HRun=0;HaplotypeScore=125.7461;InbreedingCoeff=0.9200;MQ=70.93;MQ0=3;MQRankSum=-1.992;QD=27.26;ReadPosRankSum=3.941;VQSLOD=5.8674;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:67,0:67:99:0,193,2791	1/1:3,7:11:18.01:265,18,0	0/0:43,0:32:83.19:0,83,1071	0/0:23,0:21:59.55:0,60,732	0/1:11,15:25:5.46:340,0,5	0/0:24,0:24:69.23:0,69,1049	0/0:26,0:26:68.57:0,69,979	1/1:8,16:26:44.88:594,45,0	1/1:6,17:23:23.20:639,23,0	0/0:31,0:31:85.50:0,85,1188	0/0:18,0:18:51.16:0,51,752	0/0:33,0:33:99:0,99,1454	0/0:36,0:36:99:0,99,1494	0/0:30,0:30:90.31:0,90,1369	1/1:6,38:44:99:1585,102,0	1/1:7,26:33:65.93:1037,66,0	1/1:7,27:34:63.57:988,64,0	1/1:7,20:27:7.41:636,7,0	0/0:22,0:22:54.16:0,54,770	0/0:26,0:26:75.24:0,75,1116	0/0:51,0:51:99:0,144,2092	0/0:27,0:27:75.19:0,75,1078	0/0:21,0:21:63.16:0,63,895	0/0:42,0:42:99:0,112,1699	1/1:8,8:16:26.90:403,27,0	0/0:32,0:32:90.28:0,90,1305	0/0:19,0:19:57.19:0,57,862	1/1:5,7:12:12.79:383,13,0
chr10	95587706	.	ATAAGACAGCTGC	A	15657.60	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.981;DP=656;FS=2.489;HRun=0;HaplotypeScore=233.0238;InbreedingCoeff=0.9822;MQ=90.67;MQ0=0;MQRankSum=-16.573;QD=105.79;ReadPosRankSum=1.013;VQSLOD=4.5148;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,6842	1/1:0,10:10:27.09:1069,27,0	0/0:24,0:24:72.25:0,72,3894	0/0:33,0:33:92.45:0,92,4902	1/1:0,27:27:75.17:2669,75,0	0/0:31,0:31:93.32:0,93,5639	0/0:17,0:17:51.18:0,51,3168	1/1:0,16:16:48.13:1711,48,0	1/1:0,28:28:78.27:3086,78,0	0/0:28,0:28:84.29:0,84,5121	0/0:25,0:25:75.26:0,75,4491	0/0:15,0:15:45.15:0,45,2641	0/0:26,0:26:78.27:0,78,4586	0/0:35,0:35:99:0,105,6186	1/1:0,21:21:54.02:2138,54,0	1/1:0,29:29:78.27:3087,78,0	0/0:23,0:23:69.24:0,69,4243	0/0:18,0:18:51.15:0,51,2803	0/0:13,0:13:39.12:0,39,2078	0/0:30,0:30:90.28:0,90,4960	0/0:24,0:24:72.23:0,72,3941	0/0:21,0:21:63.22:0,63,3911	0/0:21,0:21:63.22:0,63,3416	0/0:19,0:19:57.20:0,57,3267	1/1:0,15:15:42.14:1662,42,0	0/0:26,0:26:78.27:0,78,4591	0/0:41,0:41:99:0,123,7410	1/1:0,2:2:6.02:238,6,0
chr10	95588537	.	TTTC	T	9289.10	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.714;DP=829;FS=21.680;HRun=0;HaplotypeScore=180.2793;InbreedingCoeff=0.9999;MQ=74.09;MQ0=0;MQRankSum=-10.136;QD=40.39;ReadPosRankSum=0.725;VQSLOD=4.2143;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,157,3407	1/1:1,12:13:30.06:480,30,0	0/0:35,0:32:86.83:0,87,1539	0/0:25,0:22:54.06:0,54,1025	1/1:1,34:35:90.26:1456,90,0	0/0:21,0:21:63.22:0,63,1410	0/0:25,0:25:72.23:0,72,1547	1/1:3,37:40:99:1782,108,0	1/1:1,28:29:72.17:1226,72,0	0/0:43,0:43:99:0,126,2783	0/0:19,0:19:54.18:0,54,1180	0/0:37,0:37:99:0,105,2236	0/0:19,0:19:54.17:0,54,1167	0/0:23,0:23:66.23:0,66,1478	1/1:4,43:47:99:1891,111,0	1/1:5,21:26:48.16:818,48,0	0/0:33,0:33:90.27:0,90,1823	0/0:26,0:26:69.23:0,69,1544	0/0:28,0:27:78.26:0,78,1673	0/0:29,0:29:81.28:0,81,1778	0/0:36,0:36:99:0,102,2199	0/0:21,0:21:60.19:0,60,1236	0/0:29,0:29:81.28:0,81,1784	0/0:27,0:27:81.28:0,81,1784	1/1:0,18:18:54.18:906,54,0	0/0:36,0:36:99:0,105,2271	0/0:33,0:33:99:0,99,2138	1/1:1,21:22:45.15:728,45,0
chr10	95590379	.	ATGCTAGAGGCCAGCCTAGAG	A	27740.34	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=6.604;DP=556;FS=1.310;HRun=0;HaplotypeScore=223.5239;InbreedingCoeff=0.7788;MQ=87.21;MQ0=0;MQRankSum=-10.278;QD=54.39;ReadPosRankSum=6.447;VQSLOD=3.8453;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:15.05:649,15,0	1/1:1,7:8:12.04:685,12,0	0/0:25,0:25:68.40:0,68,2866	0/0:21,0:21:55.57:0,56,2014	1/1:1,19:20:35.73:842,36,0	1/1:0,21:21:33.11:1808,33,0	1/1:0,25:25:18.06:1009,18,0	1/1:2,24:26:69.20:1174,69,0	1/1:0,20:20:18.06:1027,18,0	1/1:0,21:21:57:1286,57,0	1/1:1,8:9:11.91:379,12,0	1/1:0,32:32:45.15:2547,45,0	1/1:0,16:16:15.05:855,15,0	1/1:0,21:21:20.76:1163,21,0	1/1:1,29:30:39.03:1914,39,0	1/1:0,20:20:30.57:1712,31,0	1/1:0,13:13:21.07:1119,21,0	1/1:0,17:17:9.03:373,9,0	1/1:1,22:23:63.13:1292,63,0	1/1:1,14:15:26.92:683,27,0	1/1:0,28:28:15.01:429,15,0	1/1:0,9:9:14.92:401,15,0	1/1:0,9:9:5.93:178,6,0	1/1:0,20:20:6.02:340,6,0	1/1:0,17:17:27.09:1165,27,0	1/1:0,22:22:51.04:1647,51,0	1/1:1,32:33:48.12:2737,48,0	1/1:0,8:8:6.02:324,6,0
chr10	95590590	.	AC	A	1373.35	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.790;DP=641;FS=5.130;HRun=1;HaplotypeScore=65.1315;InbreedingCoeff=0.9964;MQ=74.61;MQ0=0;MQRankSum=-2.413;QD=36.14;ReadPosRankSum=0.713;VQSLOD=3.8728;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:99:1468,105,0	0/0:12,0:12:36.12:0,36,574	0/0:10,0:10:23.29:0,23,338	0/0:15,0:15:30.70:0,31,473	0/0:19,0:19:48.16:0,48,767	0/0:27,0:27:81.25:0,81,1246	0/0:25,0:25:72.23:0,72,1127	0/0:24,0:24:72.24:0,72,1128	0/0:27,0:27:81.28:0,81,1285	0/0:17,0:17:51.17:0,51,813	0/0:14,0:14:33.11:0,33,527	0/0:38,0:38:99:0,111,1728	0/0:19,0:19:57.17:0,57,874	0/0:18,0:18:51.17:0,51,811	0/0:35,0:35:99:0,102,1625	0/0:31,0:31:93.32:0,93,1486	0/0:31,0:31:93.32:0,93,1474	0/0:20,0:20:57.15:0,57,874	0/0:27,0:27:81.28:0,81,1292	0/0:21,0:21:63.19:0,63,982	0/0:32,0:32:96.29:0,96,1484	0/0:11,0:11:33.11:0,33,525	0/0:14,0:14:42.14:0,42,668	0/0:19,0:19:54.18:0,54,863	0/0:25,0:25:72.21:0,72,1103	0/0:31,0:31:87.28:0,87,1367	0/0:28,0:28:84.24:0,84,1289	0/0:13,0:13:39.13:0,39,620
chr10	95590752	.	GT	G	4584.41	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.195;DP=672;FS=0.677;HRun=9;HaplotypeScore=66.4634;InbreedingCoeff=0.9992;MQ=77.57;MQ0=1;MQRankSum=-2.709;QD=24.00;ReadPosRankSum=0.411;VQSLOD=5.5769;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1167	1/1:1,7:8:21.01:192,21,0	0/0:25,0:25:44.77:0,45,456	0/0:12,0:12:32.66:0,33,333	1/1:2,22:24:63.03:576,63,0	0/0:32,0:31:65.86:0,66,1006	0/0:24,1:25:41.74:0,42,734	1/1:8,37:45:99:1016,111,0	1/1:1,21:22:63.03:577,63,0	0/0:24,0:24:48.61:0,49,555	0/0:12,0:12:33.10:0,33,381	0/0:31,0:31:90.26:0,90,1028	0/0:19,0:19:54.16:0,54,622	0/0:15,0:15:45.12:0,45,505	1/1:1,18:19:51.03:467,51,0	1/1:0,31:31:83.91:769,84,0	0/0:28,0:28:81.24:0,81,935	0/0:17,0:17:48.13:0,48,543	0/0:23,0:23:60.10:0,60,657	0/0:40,0:40:99:0,114,1284	0/0:33,0:33:90.24:0,90,1018	0/0:21,0:21:57.17:0,57,658	0/0:14,0:15:38.95:0,39,430	0/0:23,0:23:66.20:0,66,761	1/1:1,22:23:66.04:604,66,0	0/0:24,0:24:66.18:0,66,752	0/0:26,0:26:75.21:0,75,857	1/1:1,18:19:42.02:384,42,0
chr10	95593047	.	AC	A	2047.56	PASS	AB=1.000;AC=49;AF=0.942;AN=52;BaseQRankSum=-3.257;DP=326;FS=15.402;HRun=1;HaplotypeScore=61.6906;InbreedingCoeff=0.4301;MQ=61.91;MQ0=22;MQRankSum=-4.795;QD=7.24;ReadPosRankSum=1.151;VQSLOD=-0.7018;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,1:20:41.77:214,42,0	1/1:4,0:3:5.97:48,6,0	0/1:36,0:13:1.96:2,0,85	0/0:42,0:20:30.14:0,30,221	1/1:17,0:16:15.87:83,16,0	1/1:8,1:5:8.94:85,9,0	1/1:5,0:4:7.19:44,7,0	1/1:23,1:21:45.01:292,45,0	1/1:4,0:4:10.68:62,11,0	1/1:5,1:3:4.52:24,5,0	1/1:6,1:6:3.92:14,4,0	1/1:6,2:6:7.18:43,7,0	1/1:5,1:5:5.21:30,5,0	./.	1/1:5,0:5:6.70:30,7,0	1/1:9,0:8:13.86:70,14,0	1/1:10,0:10:16:84,16,0	1/1:15,0:10:13.98:74,14,0	1/1:18,2:18:40.95:273,41,0	1/1:4,1:5:7.19:44,7,0	1/1:4,1:4:1.24:3,1,0	1/1:4,0:2:5.93:52,6,0	./.	1/1:2,0:1:2.04:6,2,0	1/1:18,0:16:27.53:160,28,0	1/1:15,1:16:29.67:205,30,0	1/1:13,3:15:17.60:107,18,0	1/1:9,0:8:17.74:115,18,0
chr10	95593265	.	AAAATT	A	2172.79	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.066;DP=325;FS=7.658;HRun=0;HaplotypeScore=63.0032;InbreedingCoeff=0.6589;MQ=70.81;MQ0=0;MQRankSum=-2.195;QD=42.60;ReadPosRankSum=3.311;VQSLOD=2.4622;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.28:0,81,2323	0/0:5,0:4:9.03:0,9,267	0/0:13,0:8:14.40:0,14,364	0/0:16,0:12:18.41:0,18,323	0/0:12,0:12:33.11:0,33,876	0/0:22,0:21:60.21:0,60,1766	0/0:5,0:5:12.04:0,12,343	0/0:29,0:29:72.17:0,72,1877	0/0:9,0:9:24.08:0,24,711	0/0:10,0:10:27.09:0,27,789	0/0:10,0:10:27.09:0,27,799	0/0:2,0:2:6.02:0,6,178	0/0:4,0:4:9.03:0,9,267	0/0:5,0:5:15.05:0,15,444	0/0:11,0:11:30.10:0,30,867	0/0:7,0:7:21.07:0,21,568	1/1:4,25:28:60.21:1177,60,0	1/1:1,21:22:57.20:1116,57,0	0/0:21,0:21:60.19:0,60,1665	0/0:3,0:3:9.03:0,9,266	0/0:2,0:2:6.02:0,6,172	0/0:1,0:1:3.01:0,3,89	0/0:2,0:2:6.02:0,6,141	0/0:2,0:2:3.01:0,3,61	0/0:20,0:20:54.19:0,54,1567	0/0:15,0:15:45.15:0,45,1295	0/0:14,0:14:33.11:0,33,973	0/0:7,0:7:21.07:0,21,622
chr10	95594768	.	CT	C	4124.13	PASS	AB=1.000;AC=46;AF=0.852;AN=54;BaseQRankSum=8.948;DP=451;FS=4.644;HRun=2;HaplotypeScore=423.2950;InbreedingCoeff=0.2968;MQ=29.77;MQ0=4;MQRankSum=-2.754;QD=9.55;ReadPosRankSum=6.859;VQSLOD=1.4281;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:10:23.24:130,23,0	1/1:8,0:7:20.54:126,21,0	./.	0/0:2,0:1:3.01:0,3,35	1/1:21,0:14:33.34:189,33,0	1/1:24,0:17:20.11:236,20,0	1/1:9,0:9:6.27:112,6,0	0/0:16,0:9:20.65:0,21,141	1/1:13,0:9:6.33:114,6,0	1/1:4,17:18:9.62:188,10,0	1/1:20,0:15:41.07:247,41,0	1/1:27,0:21:61.34:356,61,0	1/1:20,0:13:18.06:183,18,0	1/1:24,0:16:26.63:224,27,0	1/1:34,0:23:17.84:270,18,0	1/1:23,0:16:46.65:267,47,0	1/1:7,0:7:14.98:82,15,0	0/1:14,0:10:10.55:47,0,11	1/1:7,0:5:14.34:74,14,0	1/1:26,0:17:24.20:214,24,0	0/1:5,0:4:20.12:20,0,35	1/1:19,0:14:15.22:169,15,0	1/1:11,0:9:17.34:96,17,0	0/1:10,0:8:38.44:38,0,39	1/1:20,0:15:40.79:231,41,0	0/1:29,0:20:35.57:172,0,36	1/1:21,0:17:25.48:226,25,0	1/1:7,0:7:20.33:113,20,0
chr10	95595296	.	GA	G	12314.73	PASS	AB=0.955;AC=49;AF=0.875;AN=56;BaseQRankSum=6.351;DP=698;FS=26.072;HRun=10;HaplotypeScore=72.5409;InbreedingCoeff=0.8797;MQ=72.77;MQ0=0;MQRankSum=-2.814;QD=19.64;ReadPosRankSum=0.621;VQSLOD=3.6442;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,42:46:99:1068,123,0	1/1:0,12:12:26.99:235,27,0	0/1:20,0:20:4.34:4,0,222	0/0:13,0:11:16.52:0,17,121	1/1:4,32:36:77.93:677,78,0	1/1:4,20:24:56.98:495,57,0	1/1:6,21:27:56.98:495,57,0	1/1:4,21:25:62.98:547,63,0	1/1:3,21:24:59.97:521,60,0	1/1:8,18:26:23.80:436,24,0	1/1:2,19:21:41.98:365,42,0	1/1:5,17:23:44.01:371,44,0	1/1:3,23:26:62.97:547,63,0	1/1:3,20:24:62.02:527,62,0	1/1:2,28:30:83.98:729,84,0	1/1:1,25:26:68.97:599,69,0	0/0:26,1:27:49.13:0,49,762	0/0:31,0:31:78.18:0,78,850	1/1:6,12:18:35.98:312,36,0	1/1:3,20:23:50.96:443,51,0	1/1:1,25:26:68.99:599,69,0	1/1:3,22:25:59.96:521,60,0	1/1:3,14:18:38.03:319,38,0	1/1:5,28:33:61.19:657,61,0	1/1:1,23:24:56.99:495,57,0	1/1:5,17:22:47.98:417,48,0	1/1:7,25:32:71.97:625,72,0	1/1:0,15:15:35.99:313,36,0
chr10	95596095	.	CTCTTTTTT	C	5250.29	PASS	AB=0.786;AC=43;AF=0.796;AN=54;BaseQRankSum=0.001;DP=506;FS=1.307;HRun=0;HaplotypeScore=96.7304;InbreedingCoeff=0.5076;MQ=51.21;MQ0=26;MQRankSum=5.068;QD=14.50;ReadPosRankSum=2.593;VQSLOD=3.4871;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:19:6.02:145,6,0	1/1:5,0:5:3.77:27,4,0	0/0:52,0:7:20.36:0,20,252	0/0:54,0:16:13.81:0,14,305	1/1:4,0:23:6.02:211,6,0	1/1:1,19:19:9.03:210,9,0	1/1:10,0:10:23.64:271,24,0	0/1:21,0:18:74.32:178,0,74	1/1:1,0:11:6.02:83,6,0	1/1:2,21:21:48.25:569,48,0	1/1:4,17:20:29.85:256,30,0	1/1:14,0:11:28.85:272,29,0	1/1:11,1:12:3.54:172,4,0	1/1:9,1:9:20.48:260,20,0	0/1:3,0:20:6.11:112,0,6	1/1:11,0:11:1:65,1,0	0/0:26,0:24:46.37:0,46,865	0/0:5,0:5:15.04:0,15,309	1/1:5,10:13:14.58:329,15,0	1/1:2,18:21:38.43:403,38,0	0/1:7,1:9:4.99:98,0,5	1/1:3,9:11:23.73:271,24,0	1/1:1,9:10:11.62:116,12,0	1/1:9,1:9:19.75:213,20,0	./.	1/1:3,22:25:23.95:487,24,0	1/1:25,1:24:33.79:466,34,0	1/1:1,0:7:5.37:35,5,0
chr10	95596096	.	TC	T	3513.64	PASS	AB=0.917;AC=48;AF=0.889;AN=54;BaseQRankSum=-0.418;DP=496;FS=0.695;HRun=1;HaplotypeScore=64.2861;InbreedingCoeff=0.4872;MQ=50.95;MQ0=27;MQRankSum=2.839;QD=8.51;ReadPosRankSum=2.295;VQSLOD=1.0411;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:18:5.99:48,6,0	1/1:5,0:5:8.96:71,9,0	0/0:52,0:7:11.69:0,12,106	0/1:52,0:14:2.69:3,0,86	1/1:24,0:23:41.43:280,41,0	1/1:20,0:19:8.19:45,8,0	1/1:11,0:10:28.15:221,28,0	1/1:21,0:18:32.92:281,33,0	1/1:10,1:11:5.99:48,6,0	1/1:23,0:21:54.15:394,54,0	1/1:21,0:20:36.21:228,36,0	1/1:14,0:11:29.84:243,30,0	1/1:10,1:11:6.29:58,6,0	1/1:9,1:9:21.07:142,21,0	1/1:22,0:20:8.58:58,9,0	1/1:11,1:11:17.17:112,17,0	0/0:25,0:23:41.61:0,42,307	0/1:4,1:5:7.30:7,0,47	1/1:14,0:13:0.58:92,1,0	1/1:19,1:20:38.48:257,38,0	1/1:9,0:9:10.15:96,10,0	1/1:10,1:10:21.38:107,21,0	1/1:9,1:10:11.50:70,11,0	1/1:10,0:9:3.43:81,3,0	./.	1/1:24,0:24:19.08:313,19,0	1/1:26,0:23:22.93:206,23,0	1/1:8,0:7:6:51,6,0
chr10	95597466	.	CT	C	2705.13	PASS	AB=0.673;AC=30;AF=0.536;AN=56;BaseQRankSum=-4.195;DP=613;FS=10.045;HRun=15;HaplotypeScore=73.8296;InbreedingCoeff=0.4223;MQ=67.20;MQ0=5;MQRankSum=0.827;QD=6.99;ReadPosRankSum=4.902;VQSLOD=2.0335;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,20:33:48.54:281,0,49	0/0:2,0:6:7.87:0,8,46	0/0:25,0:17:1.53:0,2,37	0/0:24,1:9:0.66:0,1,15	0/0:16,0:36:62.43:0,62,347	1/1:14,8:23:43.07:258,43,0	1/1:5,17:23:25.56:160,26,0	0/0:20,0:32:47.81:0,48,281	0/0:4,0:16:14.24:0,14,72	0/1:15,10:28:19.83:242,0,20	1/1:9,4:15:2.73:106,3,0	1/1:7,10:17:6.17:166,6,0	1/1:8,8:16:16.77:102,17,0	1/1:5,12:17:7.60:165,8,0	0/0:5,0:13:14.43:0,14,80	0/0:9,0:32:32.15:0,32,186	1/1:8,1:39:41.59:131,42,0	1/1:3,1:25:39.29:145,39,0	0/1:5,9:15:14.09:144,0,14	0/1:16,4:21:26.86:179,0,27	0/1:11,10:21:43.49:43,0,52	1/1:8,7:14:17.51:114,18,0	1/1:7,8:15:5.07:152,5,0	1/1:5,9:14:13.34:124,13,0	0/0:5,0:21:31.54:0,32,175	1/1:8,14:22:35.54:215,36,0	0/1:13,13:27:22.82:173,0,23	0/0:6,0:17:29.33:0,29,174
chr10	95597694	.	T	TTTTTG	28941.13	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-3.699;DP=621;FS=0.000;HRun=0;HaplotypeScore=133.5752;InbreedingCoeff=0.9736;MQ=67.29;MQ0=1;MQRankSum=-8.230;QD=53.01;ReadPosRankSum=0.721;VQSLOD=4.7735;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,24:33:65.71:1825,66,0	1/1:5,0:9:18.06:359,18,0	0/0:19,0:18:32.63:0,33,695	0/0:19,0:17:29.61:0,30,471	1/1:11,0:38:81.01:1522,81,0	1/1:4,20:27:54.19:1576,54,0	1/1:5,12:17:36.12:1036,36,0	1/1:30,0:37:42.12:816,42,0	1/1:8,0:23:48.03:1010,48,0	1/1:5,20:25:66.23:1831,66,0	1/1:10,15:25:51.17:1395,51,0	1/1:5,15:21:51.18:1452,51,0	1/1:4,22:27:69.24:1926,69,0	1/1:6,11:18:33.11:963,33,0	1/1:12,1:24:48.16:1025,48,0	1/1:13,0:27:54.19:1165,54,0	0/0:23,0:23:66.22:0,66,1214	0/0:14,0:14:36.12:0,36,691	1/1:14,5:24:48.14:1179,48,0	1/1:8,32:41:99:3149,114,0	1/1:7,10:17:33.11:867,33,0	1/1:4,9:13:24.08:700,24,0	1/1:3,6:11:13.29:340,13,0	1/1:6,8:14:24.08:665,24,0	1/1:7,0:15:27.09:587,27,0	1/1:6,21:27:63.22:1805,63,0	1/1:7,19:27:54.18:1550,54,0	1/1:4,0:5:9.03:198,9,0
chr10	95598803	.	TAATA	T	14296.24	PASS	AC=46;AF=0.852;AN=54;BaseQRankSum=6.903;DP=549;FS=0.000;HRun=0;HaplotypeScore=127.7153;InbreedingCoeff=0.8846;MQ=53.17;MQ0=1;MQRankSum=-2.505;QD=30.29;ReadPosRankSum=1.225;VQSLOD=4.2976;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,23:30:45.15:739,45,0	1/1:1,11:12:30.10:476,30,0	0/0:13,0:5:3.01:0,3,55	0/0:9,0:3:5.81:0,6,87	1/1:3,27:30:71.35:1050,71,0	1/1:4,20:23:45.15:739,45,0	1/1:5,6:11:15.05:224,15,0	1/1:10,13:21:39.09:566,39,0	1/1:6,6:12:12.04:200,12,0	1/1:8,16:24:48.14:770,48,0	1/1:7,17:24:45.15:677,45,0	1/1:3,16:19:33.11:537,33,0	1/1:1,16:17:36.12:560,36,0	1/1:5,16:21:36.12:575,36,0	1/1:4,14:18:30.10:477,30,0	1/1:4,19:23:50.81:851,51,0	0/0:28,0:28:63.22:0,63,1541	0/0:21,0:21:45.13:0,45,977	1/1:3,18:22:54.17:832,54,0	1/1:4,12:16:30.10:443,30,0	1/1:4,7:11:12.04:201,12,0	1/1:1,9:10:21.07:307,21,0	1/1:11,6:17:12.04:200,12,0	./.	1/1:3,24:27:60.20:991,60,0	1/1:4,26:30:78.25:1265,78,0	1/1:5,24:29:60.20:978,60,0	1/1:6,16:22:39.13:640,39,0
chr10	95599798	.	T	TGTGGGCCACTCAGCTTGTTAGAAG	168545.01	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.158;DP=874;FS=8.124;HRun=0;HaplotypeScore=479.2219;InbreedingCoeff=0.9997;MQ=72.75;MQ0=3;MQRankSum=-11.918;QD=207.06;ReadPosRankSum=4.963;VQSLOD=4.5627;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:33,7:41:99:9978,111,0	1/1:12,2:14:39.13:2931,39,0	0/0:30,0:30:87.30:0,87,4640	0/0:30,0:30:78.26:0,78,3396	1/1:24,6:32:66.22:3693,66,0	1/1:15,7:24:63.17:5046,63,0	1/1:30,0:30:87.30:5336,87,0	1/1:50,0:50:99:8435,138,0	1/1:22,14:35:99:9356,102,0	1/1:28,8:38:99:9527,108,0	1/1:20,2:22:53.39:2919,53,0	1/1:28,7:38:96.33:8502,96,0	1/1:31,10:45:99:9445,120,0	1/1:33,10:44:99:11273,123,0	1/1:42,11:54:99:12605,154,0	1/1:29,13:44:99:10827,123,0	1/1:13,4:18:48.16:5121,48,0	1/1:10,2:13:33.11:3168,33,0	1/1:30,4:36:96.32:5696,96,0	1/1:16,5:23:58.04:4141,58,0	1/1:24,0:24:62.99:3205,63,0	1/1:16,4:25:57.20:4298,57,0	1/1:18,5:25:57.04:3950,57,0	1/1:16,2:20:36.08:1626,36,0	1/1:19,3:22:57.20:5169,57,0	1/1:27,4:32:93.32:8132,93,0	1/1:28,14:48:99:10468,111,0	1/1:8,6:14:39.13:3700,39,0
chr10	95600162	.	G	GAT	4027.23	PASS	AC=32;AF=0.593;AN=54;BaseQRankSum=-10.568;DP=340;FS=1.109;HRun=0;HaplotypeScore=37.7795;InbreedingCoeff=0.8279;MQ=74.47;MQ0=1;MQRankSum=2.864;QD=26.49;ReadPosRankSum=3.024;VQSLOD=3.8324;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:33.10:0,33,411	0/0:6,0:6:18.06:0,18,225	0/0:12,0:11:11.77:0,12,119	0/0:12,0:7:3.83:0,4,38	0/0:12,0:12:27.09:0,27,338	1/1:3,9:12:21.07:336,21,0	1/1:1,3:4:9.03:149,9,0	0/0:49,0:49:99:0,114,1403	0/0:6,0:6:12.04:0,12,150	1/1:4,5:9:15.05:248,15,0	1/1:5,1:6:3.01:49,3,0	1/1:7,3:9:6.02:99,6,0	1/1:2,7:9:18.06:283,18,0	1/1:2,5:7:12.04:198,12,0	0/0:17,0:17:30.10:0,30,375	0/0:8,0:8:15.05:0,15,187	1/1:6,14:21:36.12:594,36,0	1/1:2,9:11:21.07:347,21,0	1/1:8,14:22:42.14:685,42,0	1/1:2,7:9:18.06:297,18,0	1/1:4,7:11:21.07:347,21,0	1/1:4,1:5:3.01:50,3,0	1/1:3,1:4:3.01:49,3,0	./.	0/0:19,0:19:45.13:0,45,547	1/1:1,5:6:15.05:247,15,0	1/1:4,2:6:3.01:50,3,0	0/0:32,0:32:81.26:0,81,1010
chr10	95601104	.	ACT	A	13835.56	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=15.182;DP=576;FS=1.350;HRun=0;HaplotypeScore=70.0278;InbreedingCoeff=0.9977;MQ=88.42;MQ0=1;MQRankSum=-0.856;QD=44.49;ReadPosRankSum=1.289;VQSLOD=6.4848;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.28:0,81,1629	0/0:5,0:5:15.05:0,15,305	0/0:24,0:24:58.44:0,58,1151	0/0:17,0:17:44.27:0,44,871	0/0:17,0:17:51.16:0,51,998	1/1:0,17:17:48.16:782,48,0	1/1:0,14:14:36.12:587,36,0	0/0:27,0:27:75.22:0,75,1380	0/0:21,0:21:60.21:0,60,1190	1/1:0,25:25:75.25:1193,75,0	1/1:0,17:16:42.06:653,42,0	1/1:0,29:29:75.26:1223,75,0	1/1:0,11:11:30.10:489,30,0	1/1:0,22:22:57.19:927,57,0	0/0:23,0:23:69.21:0,69,1313	0/0:32,0:32:96.33:0,96,1948	0/0:13,0:13:39.11:0,39,741	0/0:19,0:19:57.20:0,57,1157	1/1:0,27:27:81.24:1211,81,0	1/1:0,22:22:54.14:851,54,0	1/1:0,17:17:48.16:782,48,0	1/1:0,20:20:57.19:928,57,0	1/1:0,15:15:45.15:733,45,0	1/1:0,17:17:51.17:831,51,0	0/0:17,0:17:51.18:0,51,1035	1/1:0,27:27:81.26:1294,81,0	1/1:1,30:31:84.28:1352,84,0	0/0:22,0:21:66.23:0,66,1271
chr10	95601729	.	CTTTTTT	C	8686.05	PASS	AB=0.575;AC=30;AF=0.536;AN=56;BaseQRankSum=0.815;DP=556;FS=3.626;HRun=16;HaplotypeScore=122.8985;InbreedingCoeff=0.8436;MQ=54.60;MQ0=10;MQRankSum=-10.759;QD=26.48;ReadPosRankSum=5.091;VQSLOD=2.8472;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,26:34:7.02:790,0,7	0/0:3,0:10:30.07:0,30,469	0/0:20,0:9:17.40:0,17,296	0/0:12,0:7:12.04:0,12,243	0/0:23,0:34:58.01:0,58,796	1/1:2,18:22:48.14:845,48,0	0/1:5,11:16:13.44:444,0,13	0/0:15,0:28:44.97:0,45,530	0/0:4,0:13:20.89:0,21,404	1/1:10,20:29:59.74:1003,60,0	1/1:2,8:10:21.03:378,21,0	1/1:5,16:21:32.86:582,33,0	1/1:3,16:21:41.12:670,41,0	1/1:4,11:15:23.96:432,24,0	0/0:4,0:15:15.26:0,15,260	0/0:7,0:14:26.63:0,27,343	0/0:26,0:29:69.53:0,70,1791	0/0:23,0:26:56.54:0,57,1377	1/1:6,9:15:28.25:433,28,0	1/1:5,13:19:33.02:563,33,0	1/1:3,4:7:5.96:96,6,0	1/1:8,16:24:28.75:575,29,0	1/1:11,13:24:13.67:262,14,0	1/1:2,12:14:21.02:378,21,0	0/0:5,0:14:30.05:0,30,470	1/1:11,12:24:32.68:500,33,0	1/1:2,27:30:44.94:736,45,0	0/0:2,0:10:27.06:0,27,370
chr10	95602774	.	T	TA	119.13	PASS	AB=0.892;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.109;DP=487;FS=1.600;HRun=14;HaplotypeScore=84.7114;InbreedingCoeff=0.1504;MQ=58.73;MQ0=7;MQRankSum=-2.798;QD=1.39;ReadPosRankSum=-1.402;VQSLOD=-0.6941;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,2:14:28.95:173,29,0	0/0:3,0:3:5.90:0,6,38	0/0:16,0:10:8.32:0,8,51	0/0:6,0:3:5.49:0,5,26	0/0:24,1:26:27.90:0,28,288	0/0:10,0:11:25.66:0,26,159	0/1:6,1:7:14.53:15,0,44	0/0:25,2:23:23.80:0,24,274	0/0:15,0:15:38.35:0,38,246	0/1:15,0:14:2.79:3,0,111	0/0:14,1:16:5.28:0,5,152	0/1:20,2:22:28.35:28,0,172	0/0:14,0:15:25.62:0,26,159	0/0:11,0:11:26.56:0,27,173	0/0:29,0:28:49.74:0,50,320	0/0:19,0:20:40.41:0,40,254	0/0:16,0:15:34.54:0,35,217	0/0:31,1:31:50.99:0,51,403	0/0:20,0:21:9.89:0,10,171	0/0:20,0:21:30.72:0,31,180	0/0:10,0:10:11.80:0,12,77	0/1:4,2:6:17.54:18,0,30	0/0:21,0:21:38.33:0,38,247	0/0:14,0:14:23.53:0,24,154	0/0:22,1:23:19.95:0,20,258	0/1:19,2:21:10.88:11,0,186	0/0:29,1:30:11.84:0,12,323	0/0:13,0:14:34.60:0,35,232
chr10	95602975	.	CACTA	C	6345.96	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=3.623;DP=567;FS=10.425;HRun=0;HaplotypeScore=158.6535;InbreedingCoeff=0.9961;MQ=66.13;MQ0=1;MQRankSum=-5.158;QD=43.47;ReadPosRankSum=1.108;VQSLOD=4.9759;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.26:0,87,2233	1/1:0,7:7:21.07:348,21,0	0/0:14,0:13:36.08:0,36,814	0/0:20,0:20:48.91:0,49,1131	1/1:3,14:17:33.11:587,33,0	0/0:16,0:16:45.12:0,45,1127	0/0:27,0:27:75.26:0,75,1953	1/1:4,19:23:57.17:982,57,0	1/1:3,15:18:42.14:768,42,0	0/0:26,0:25:66.23:0,66,1715	0/0:10,0:10:27.09:0,27,662	0/0:28,0:27:69.24:0,69,1807	0/0:21,0:20:54.19:0,54,1422	0/0:20,0:20:57.20:0,57,1502	1/1:3,24:27:66.22:1165,66,0	1/1:2,29:31:75.26:1356,75,0	0/0:26,0:26:75.26:0,75,1977	0/0:18,0:18:48.16:0,48,1265	0/0:27,0:27:66.16:0,66,1610	0/0:24,0:24:63.22:0,63,1648	0/0:28,0:28:66.14:0,66,1623	0/0:5,0:5:15.05:0,15,395	0/0:14,0:14:36.12:0,36,900	0/0:11,0:11:30.06:0,30,672	1/1:0,13:13:36.12:643,36,0	0/0:25,0:25:69.24:0,69,1784	0/0:29,0:28:81.24:0,81,2002	1/1:1,9:10:27.09:496,27,0
chr10	95603142	.	TG	T	4724.52	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-1.625;DP=511;FS=38.608;HRun=1;HaplotypeScore=83.6998;InbreedingCoeff=0.7179;MQ=60.09;MQ0=28;MQRankSum=-2.890;QD=10.94;ReadPosRankSum=-0.326;VQSLOD=0.8984;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,1:18:41.72:280,42,0	1/1:6,0:6:5.91:38,6,0	0/0:28,0:11:8.49:0,8,96	0/1:22,0:15:12.48:12,0,169	1/1:31,0:31:75.27:465,75,0	1/1:16,0:15:37.10:221,37,0	1/1:19,0:15:37.94:263,38,0	1/1:22,0:18:42.39:244,42,0	1/1:13,0:12:19.74:99,20,0	1/1:18,0:16:39.32:250,39,0	1/1:14,1:15:23.78:128,24,0	1/1:12,0:12:24.03:134,24,0	1/1:12,0:13:28.05:167,28,0	1/1:4,0:4:6.85:48,7,0	1/1:27,0:26:36.01:217,36,0	1/1:20,0:20:45.41:253,45,0	0/0:32,0:28:37.46:0,37,289	0/0:19,0:15:8.96:0,9,157	1/1:29,0:28:62.07:354,62,0	1/1:13,0:13:30.67:198,31,0	1/1:9,1:6:9.17:41,9,0	1/1:9,0:9:9.03:39,9,0	1/1:18,0:16:40.23:250,40,0	1/1:15,0:13:18.47:121,18,0	1/1:21,0:19:34.09:203,34,0	1/1:22,1:22:49.33:353,49,0	1/1:17,1:16:35.59:221,36,0	1/1:15,0:14:20.26:123,20,0
chr10	95603143	.	G	GTT	3028.23	PASS	AB=0.917;AC=52;AF=0.929;AN=56;BaseQRankSum=-0.927;DP=518;FS=4.104;HRun=16;HaplotypeScore=96.5939;InbreedingCoeff=-0.0324;MQ=58.64;MQ0=32;MQRankSum=0.128;QD=5.85;ReadPosRankSum=1.191;VQSLOD=0.4882;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:18:13.27:27,0,13	1/1:6,0:6:2.98:22,3,0	0/1:26,0:11:5.56:9,0,6	0/1:18,0:14:8.46:8,0,19	1/1:31,0:31:38.85:316,39,0	1/1:18,0:17:16.94:118,17,0	1/1:19,0:15:12.09:84,12,0	1/1:22,0:18:22.93:224,23,0	1/1:13,0:12:17.99:163,18,0	1/1:19,0:17:15.63:57,16,0	1/1:15,0:15:12.14:102,12,0	1/1:13,0:13:12.08:58,12,0	1/1:14,0:13:17.58:98,18,0	1/1:4,0:4:2.50:9,2,0	1/1:26,0:25:28.61:228,29,0	1/1:20,0:20:40.52:325,41,0	0/1:16,14:28:53.90:172,0,54	1/1:14,1:15:4.24:176,4,0	1/1:30,0:29:24.11:156,24,0	1/1:13,0:13:6.21:52,6,0	1/1:10,0:6:7.23:32,7,0	1/1:9,0:9:3.43:30,3,0	1/1:18,0:16:19.62:100,20,0	1/1:16,0:13:10.56:80,11,0	1/1:21,0:19:15.54:217,16,0	1/1:24,0:23:0.48:107,0,0	1/1:18,0:15:14.38:63,14,0	1/1:15,0:14:14.71:109,15,0
chr10	95603146	.	T	TTG	2726.84	PASS	AB=0.914;AC=19;AF=0.339;AN=56;BaseQRankSum=-3.625;DP=523;FS=6.624;HRun=0;HaplotypeScore=96.4496;InbreedingCoeff=0.5886;MQ=56.61;MQ0=41;MQRankSum=3.465;QD=10.53;ReadPosRankSum=5.826;VQSLOD=2.4045;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:18:36.05:0,36,281	1/1:0,5:6:5.93:62,6,0	0/1:28,0:11:9.35:9,0,72	0/1:19,0:12:10.19:10,0,102	1/1:5,25:30:67.77:660,68,0	0/0:17,0:16:30.80:0,31,243	0/0:18,0:13:20.84:0,21,141	1/1:12,14:21:27.73:439,28,0	1/1:1,11:11:18.06:268,18,0	0/0:18,0:16:41.82:0,42,273	0/0:15,0:15:10.20:0,10,114	0/0:14,0:14:32.79:0,33,206	0/0:16,0:13:19.63:0,20,156	0/0:5,0:5:8.71:0,9,59	1/1:7,20:26:19.09:388,19,0	1/1:4,16:21:39.71:513,40,0	0/1:32,0:27:15.96:16,0,285	0/1:20,0:15:8.95:9,0,158	0/0:29,0:28:62.99:0,63,439	0/0:13,0:12:25.14:0,25,198	0/0:10,0:6:9.91:0,10,48	0/0:10,0:10:13.83:0,14,95	0/0:18,0:16:39.86:0,40,242	0/0:16,0:13:11.38:0,11,76	0/1:5,15:18:6.54:339,0,7	0/0:24,0:22:41.26:0,41,329	0/0:18,0:14:30.81:0,31,205	1/1:7,9:15:17.83:209,18,0
chr10	95603147	.	T	TG	1061.84	PASS	AB=0.959;AC=15;AF=0.268;AN=56;BaseQRankSum=2.173;DP=516;FS=4.380;HRun=0;HaplotypeScore=93.5454;InbreedingCoeff=0.7030;MQ=54.96;MQ0=43;MQRankSum=3.328;QD=6.03;ReadPosRankSum=5.533;VQSLOD=2.8733;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:18:34.51:0,35,277	1/1:5,0:5:5.83:33,6,0	0/0:26,0:10:0.41:0,0,93	0/1:18,0:11:5.63:6,0,85	1/1:26,2:28:53.27:376,53,0	0/0:17,0:16:45.20:0,45,306	0/0:17,0:12:24.73:0,25,162	0/1:23,1:20:1.86:140,0,2	1/1:12,0:11:17.39:96,17,0	0/0:18,0:16:44.36:0,44,304	0/0:15,0:15:19.32:0,19,136	0/0:14,0:14:35.70:0,36,253	0/0:16,0:13:32.72:0,33,198	0/0:5,0:5:11.59:0,12,76	1/1:25,1:25:7.68:133,8,0	1/1:19,2:21:25.79:240,26,0	0/0:32,0:27:38.71:0,39,335	0/0:20,0:15:29.82:0,30,215	0/0:28,0:27:73.71:0,74,517	0/0:13,0:12:30.46:0,30,216	0/0:10,0:6:11.67:0,12,69	0/0:10,0:10:17.18:0,17,100	0/0:18,0:16:44.89:0,45,294	0/0:16,0:13:18.29:0,18,136	0/1:19,1:18:8.90:120,0,9	0/0:24,0:22:54.37:0,54,394	0/0:18,0:14:35.64:0,36,252	1/1:19,1:16:15.28:100,15,0
chr10	95603298	.	CA	C	1670.82	PASS	AB=0.632;AC=27;AF=0.482;AN=56;BaseQRankSum=-5.252;DP=434;FS=3.085;HRun=15;HaplotypeScore=52.6379;InbreedingCoeff=0.6360;MQ=70.62;MQ0=4;MQRankSum=0.799;QD=7.81;ReadPosRankSum=2.230;VQSLOD=2.7928;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:20:29.67:0,30,170	0/0:2,0:5:2.84:0,3,14	0/0:21,0:10:9.74:0,10,71	0/0:21,1:15:6.36:0,6,49	0/0:8,0:22:46.49:0,46,279	1/1:3,18:20:38.40:250,38,0	1/1:6,7:13:20.59:134,21,0	0/0:9,0:21:31.43:0,31,162	0/0:4,0:16:8.52:0,9,42	1/1:4,5:11:17.94:106,18,0	1/1:4,12:17:19.55:121,20,0	0/1:6,9:15:35:104,0,35	1/1:7,5:12:5.78:38,6,0	1/1:2,5:7:5.90:38,6,0	0/0:10,0:19:17.35:0,17,105	0/0:3,0:8:8.52:0,9,42	0/0:6,0:20:28.51:0,29,149	0/0:4,0:15:14.27:0,14,81	1/1:8,6:14:17.38:107,17,0	1/1:2,14:17:13.14:197,13,0	1/1:3,5:9:0.53:63,1,0	0/1:8,6:15:50.49:92,0,50	1/1:6,10:16:29.50:192,30,0	1/1:4,5:11:20.84:114,21,0	0/0:5,0:18:20.03:0,20,108	0/1:6,14:20:28.42:186,0,28	1/1:4,12:15:20.11:133,20,0	0/0:6,1:12:7.19:0,7,144
chr10	95605913	.	C	CT	4554.01	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=-2.570;DP=500;FS=0.952;HRun=3;HaplotypeScore=69.6487;InbreedingCoeff=0.4095;MQ=67.60;MQ0=7;MQRankSum=-1.514;QD=15.18;ReadPosRankSum=2.817;VQSLOD=4.3164;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:30:42.13:561,42,0	1/1:0,12:12:27.04:353,27,0	0/0:28,0:17:24.28:0,24,213	0/0:28,0:10:12.22:0,12,64	1/1:1,15:16:41.30:461,41,0	0/1:20,0:20:0.39:0,0,115	0/0:9,0:9:0.71:0,1,39	1/1:6,25:30:75.17:907,75,0	1/1:1,7:8:15.05:199,15,0	0/0:18,0:18:22.28:0,22,197	0/1:16,0:16:7.05:7,0,47	0/1:16,0:16:4.66:5,0,66	0/0:19,0:19:4.62:0,5,177	0/0:16,0:16:1.27:0,1,91	1/1:2,17:19:30.10:408,30,0	1/1:1,13:14:36.12:492,36,0	0/0:23,0:23:56.59:0,57,645	0/0:18,0:18:51.15:0,51,595	0/1:23,0:21:2.59:3,0,122	0/1:22,0:21:14.13:14,0,103	0/0:7,0:7:3.39:0,3,48	0/1:7,0:7:0.08:0,0,41	0/0:5,0:5:3.97:0,4,48	0/1:13,0:13:8.34:8,0,59	1/1:3,17:20:46.96:618,47,0	0/0:25,0:25:2.63:0,3,169	0/1:18,0:18:12.89:13,0,26	1/1:1,14:15:37.94:506,38,0
chr10	95605916	.	T	TA	5134.67	PASS	AB=0.792;AC=46;AF=0.821;AN=56;BaseQRankSum=-0.703;DP=530;FS=3.121;HRun=13;HaplotypeScore=75.8669;InbreedingCoeff=0.3878;MQ=69.29;MQ0=10;MQRankSum=0.587;QD=11.33;ReadPosRankSum=1.737;VQSLOD=4.8537;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:30:11.14:206,11,0	1/1:13,0:13:23.10:125,23,0	0/1:34,0:20:7.70:8,0,60	0/0:32,0:10:2.31:0,2,19	0/1:17,0:17:14.83:111,0,15	1/1:10,9:19:24.26:343,24,0	1/1:3,6:9:12.01:111,12,0	1/1:26,0:26:34.70:258,35,0	1/1:7,0:8:14.58:83,15,0	1/1:7,14:21:35.79:304,36,0	1/1:2,14:17:35.99:326,36,0	1/1:3,14:17:9.45:231,9,0	0/1:8,11:20:10.41:201,0,10	1/1:7,11:18:9.39:230,9,0	1/1:17,0:18:12.62:134,13,0	1/1:13,0:14:34.53:182,35,0	0/0:22,0:22:31.99:0,32,340	0/0:20,0:20:53.50:0,53,366	1/1:9,14:22:47.56:399,48,0	1/1:8,18:25:29.08:397,29,0	1/1:3,3:6:6.01:56,6,0	1/1:4,4:8:15.01:137,15,0	1/1:2,5:7:6.48:57,6,0	0/1:4,9:13:11.18:181,0,11	1/1:20,0:20:10.07:214,10,0	1/1:5,17:22:21.82:305,22,0	1/1:5,17:22:42:385,42,0	1/1:18,0:18:1.71:152,2,0
chr10	95608037	.	GCCAAAAAAAAA	G	2349.45	PASS	AB=1.000;AC=52;AF=0.929;AN=56;BaseQRankSum=0.666;DP=418;FS=9.292;HRun=0;HaplotypeScore=166.7923;InbreedingCoeff=0.0095;MQ=64.07;MQ0=18;MQRankSum=1.388;QD=5.62;ReadPosRankSum=2.756;VQSLOD=1.5037;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:19.41:19,0,30	1/1:6,0:7:10.01:87,10,0	0/1:42,0:12:3.52:4,0,65	0/1:38,0:11:52.57:53,0,83	1/1:25,1:29:28.85:318,29,0	1/1:16,0:16:13.23:46,13,0	1/1:7,0:8:8.12:54,8,0	1/1:16,0:17:17.18:72,17,0	1/1:8,1:10:13.79:121,14,0	1/1:13,0:13:15.56:45,16,0	1/1:24,0:23:21.13:95,21,0	1/1:8,0:8:10.53:92,11,0	0/1:11,0:11:15.67:47,0,16	1/1:6,0:6:9.44:46,9,0	1/1:12,1:13:17.66:209,18,0	1/1:14,2:18:19.62:299,20,0	1/1:13,0:14:15.03:112,15,0	1/1:15,0:15:19.68:110,20,0	1/1:11,0:10:7.06:18,7,0	1/1:11,0:13:15.08:271,15,0	1/1:9,0:9:0.07:28,0,0	1/1:11,0:11:4.16:9,4,0	1/1:12,0:13:11.98:91,12,0	1/1:9,0:8:4.81:22,5,0	1/1:14,0:14:10.47:34,10,0	1/1:12,0:12:10.28:54,10,0	1/1:11,0:12:13.58:100,14,0	1/1:10,0:7:3.62:13,4,0
chr10	95608070	.	A	ACCC	2982.90	PASS	AB=0.674;AC=13;AF=0.232;AN=56;BaseQRankSum=10.014;DP=649;FS=108.024;HRun=0;HaplotypeScore=87.4995;InbreedingCoeff=0.6110;MQ=57.42;MQ0=66;MQRankSum=-8.872;QD=18.08;ReadPosRankSum=0.634;VQSLOD=-0.0117;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:45.15:0,45,653	1/1:3,1:3:5.98:89,6,0	0/0:58,0:16:40.19:0,40,507	0/0:93,0:23:25.01:0,25,353	0/1:14,11:24:16.55:500,0,17	0/0:19,0:18:47.88:0,48,726	0/0:17,0:17:40.74:0,41,509	1/1:20,9:29:0.31:805,0,0	0/1:8,7:13:13.37:77,0,13	0/0:23,0:19:46.82:0,47,610	0/0:15,0:12:21.42:0,21,299	0/0:18,0:15:30.99:0,31,455	0/0:18,0:17:35.21:0,35,505	0/0:22,0:21:52.79:0,53,707	1/1:9,11:20:9.96:345,10,0	1/1:14,14:30:53.69:775,54,0	0/0:15,0:15:32.86:0,33,402	0/0:23,0:21:34.27:0,34,637	0/0:13,0:11:29.95:0,30,367	0/0:31,0:30:35.99:0,36,998	0/0:13,0:10:27.08:0,27,384	0/0:14,0:13:32.23:0,32,441	0/0:16,0:16:39.06:0,39,570	0/0:13,0:10:27.55:0,28,389	0/1:9,11:18:12.40:343,0,12	0/0:17,0:17:38.94:0,39,529	0/0:27,0:25:44.03:0,44,728	1/1:7,13:16:11.88:216,12,0
chr10	95608362	.	T	TA	1766.08	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.267;DP=697;FS=3.260;HRun=6;HaplotypeScore=71.6336;InbreedingCoeff=0.9967;MQ=67.06;MQ0=0;MQRankSum=-0.068;QD=29.93;ReadPosRankSum=0.264;VQSLOD=4.3088;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:95.34:0,95,968	0/0:11,0:11:24.05:0,24,245	0/0:23,0:21:48.09:0,48,481	0/0:27,0:26:50.15:0,50,513	0/0:32,0:32:78.17:0,78,794	0/0:23,0:23:69.14:0,69,697	0/0:21,0:21:35.72:0,36,530	0/0:25,0:25:60.09:0,60,597	0/0:32,0:32:90.14:0,90,905	0/0:23,0:23:60.14:0,60,612	0/0:22,0:21:51.11:0,51,520	0/0:33,0:33:78.17:0,78,796	0/0:30,0:30:78.15:0,78,788	0/0:23,0:23:66.14:0,66,666	0/0:43,0:43:99:0,126,1268	0/0:29,0:29:75.16:0,75,765	1/1:1,32:33:90.12:1108,90,0	1/1:4,22:26:63.19:780,63,0	0/0:24,0:24:72.16:0,72,732	0/0:19,0:19:51.11:0,51,520	0/0:22,0:22:60.14:0,60,612	0/0:23,0:23:54.11:0,54,547	0/0:21,0:21:54.12:0,54,551	0/0:14,0:14:36.06:0,36,360	0/0:17,0:17:51.12:0,51,520	0/0:27,0:27:69.15:0,69,704	0/0:32,0:32:90.20:0,90,918	0/0:7,0:7:21.05:0,21,214
chr10	95609484	.	CCCCCA	C	7719.90	PASS	AC=48;AF=0.923;AN=52;BaseQRankSum=2.246;DP=616;FS=3.091;HRun=0;HaplotypeScore=183.8731;InbreedingCoeff=0.9424;MQ=71.64;MQ0=1;MQRankSum=-4.654;QD=13.57;ReadPosRankSum=7.715;VQSLOD=3.5630;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:44,1:45:54.83:453,55,0	1/1:8,0:8:11.85:80,12,0	0/0:27,0:19:44.48:0,44,805	0/0:19,0:15:35.41:0,35,427	1/1:30,0:30:68.84:459,69,0	1/1:23,0:23:53.38:361,53,0	1/1:30,0:30:40.74:284,41,0	1/1:25,1:26:52.57:490,53,0	1/1:25,0:25:52.70:368,53,0	1/1:22,0:22:12.96:308,13,0	1/1:12,0:12:15.21:102,15,0	1/1:23,0:23:45.75:295,46,0	1/1:28,0:28:51.80:417,52,0	1/1:21,0:21:47.49:324,47,0	1/1:28,0:28:69.82:469,70,0	1/1:36,1:35:67.98:488,68,0	./.	./.	1/1:14,0:14:35.64:247,36,0	1/1:25,0:25:46.05:319,46,0	1/1:25,0:25:34.11:220,34,0	1/1:17,0:17:11.64:178,12,0	1/1:18,0:18:25.16:165,25,0	1/1:24,0:24:48.28:327,48,0	1/1:19,1:20:38.29:299,38,0	1/1:33,0:33:59.32:544,59,0	1/1:29,0:29:39.75:400,40,0	1/1:6,0:6:17.80:121,18,0
chr10	95609485	.	CCCCA	C	19522.97	PASS	AC=48;AF=0.923;AN=52;BaseQRankSum=-5.246;DP=600;FS=0.747;HRun=0;HaplotypeScore=125.7384;InbreedingCoeff=0.9715;MQ=72.91;MQ0=1;MQRankSum=-5.230;QD=35.37;ReadPosRankSum=7.045;VQSLOD=4.7889;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,42:44:75.50:1180,75,0	1/1:0,8:8:12.04:210,12,0	0/0:28,0:19:44.37:0,44,656	0/0:20,0:16:19.20:0,19,372	1/1:0,30:30:71.28:1171,71,0	1/1:0,23:23:54.18:942,54,0	1/1:1,29:30:41.31:713,41,0	1/1:3,23:26:73.71:925,74,0	1/1:1,23:24:50.74:903,51,0	1/1:0,20:20:57.09:852,57,0	1/1:1,11:12:17.13:286,17,0	1/1:2,19:21:48.11:781,48,0	1/1:1,27:28:68.90:1148,69,0	1/1:0,21:21:48.16:839,48,0	1/1:0,28:28:72.24:1233,72,0	1/1:2,32:35:72.17:1192,72,0	./.	./.	1/1:1,13:14:36.05:546,36,0	1/1:1,22:23:48.15:800,48,0	1/1:1,24:25:36.10:572,36,0	1/1:1,14:15:36.03:533,36,0	1/1:1,17:18:29.92:459,30,0	1/1:0,23:23:49.31:843,49,0	1/1:1,19:20:38.96:655,39,0	1/1:2,29:31:90.16:1310,90,0	1/1:2,25:27:65.34:1111,65,0	1/1:0,6:6:18.06:320,18,0
chr10	95609486	.	CCCA	C	10815.19	PASS	AC=48;AF=0.923;AN=52;BaseQRankSum=-1.162;DP=599;FS=0.000;HRun=0;HaplotypeScore=149.1457;InbreedingCoeff=0.9531;MQ=72.97;MQ0=1;MQRankSum=-5.128;QD=19.59;ReadPosRankSum=6.680;VQSLOD=4.0294;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:44,0:44:74.82:657,75,0	1/1:8,0:8:12.01:112,12,0	0/0:28,0:19:44.09:0,44,491	0/0:19,0:16:11.70:0,12,302	1/1:30,0:30:70.90:630,71,0	1/1:23,0:23:54:505,54,0	1/1:30,0:30:41.13:381,41,0	1/1:25,1:26:72.23:617,72,0	1/1:24,0:24:50.96:485,51,0	1/1:20,0:20:54.65:463,55,0	1/1:12,0:12:14.62:144,15,0	1/1:21,0:21:40.42:393,40,0	1/1:27,1:28:69.02:641,69,0	1/1:21,0:21:48.03:451,48,0	1/1:28,0:28:71.98:661,72,0	1/1:35,0:33:71.80:647,72,0	./.	./.	1/1:14,0:14:35.99:325,36,0	1/1:22,1:23:47.87:427,48,0	1/1:25,0:25:35.64:308,36,0	1/1:15,0:15:27.58:267,28,0	1/1:17,1:18:29.94:286,30,0	1/1:23,0:23:48.56:453,49,0	1/1:20,0:20:38.77:360,39,0	1/1:31,0:31:89.87:802,90,0	1/1:27,0:27:67.24:631,67,0	1/1:6,0:6:18.03:172,18,0
chr10	95609862	.	A	AAAAAAG	9088.51	PASS	AC=48;AF=0.923;AN=52;BaseQRankSum=-2.406;DP=413;FS=23.976;HRun=0;HaplotypeScore=120.9363;InbreedingCoeff=0.7458;MQ=52.75;MQ0=11;MQRankSum=-4.417;QD=23.13;ReadPosRankSum=0.480;VQSLOD=2.9121;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,1:13:14.26:271,14,0	1/1:4,1:12:26.96:556,27,0	0/0:9,0:6:17.95:0,18,167	0/0:9,0:7:14.94:0,15,160	1/1:6,6:12:29.61:305,30,0	1/1:4,0:15:21.01:304,21,0	1/1:3,0:11:2.62:96,3,0	1/1:24,0:23:60.82:704,61,0	1/1:1,2:10:15.05:420,15,0	1/1:9,1:20:43.46:611,43,0	1/1:7,0:15:23.55:222,24,0	1/1:5,0:9:11.99:217,12,0	1/1:4,0:19:23.56:262,24,0	1/1:3,0:14:11.98:153,12,0	1/1:3,6:13:11.99:298,12,0	1/1:9,0:18:21.03:355,21,0	./.	./.	1/1:5,0:15:41.79:454,42,0	1/1:10,1:22:41.68:513,42,0	1/1:6,0:7:2.84:31,3,0	1/1:2,0:10:20.76:226,21,0	1/1:2,0:16:29.97:404,30,0	1/1:1,0:6:15.05:253,15,0	1/1:22,1:24:57.68:842,58,0	1/1:6,0:26:67.14:852,67,0	1/1:7,0:28:32.95:441,33,0	1/1:6,0:13:9.16:299,9,0
chr10	95610236	.	GA	G	8875.48	PASS	AC=48;AF=0.923;AN=52;BaseQRankSum=-1.827;DP=570;FS=14.087;HRun=11;HaplotypeScore=70.6929;InbreedingCoeff=0.7395;MQ=63.39;MQ0=4;MQRankSum=-1.069;QD=16.56;ReadPosRankSum=3.572;VQSLOD=4.5421;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:33:44.79:130,45,0	1/1:0,6:6:17.98:148,18,0	0/0:17,0:12:11.43:0,11,104	0/0:16,0:13:23.90:0,24,174	1/1:3,33:37:88.40:718,88,0	1/1:3,14:17:3.96:239,4,0	1/1:2,8:9:20.98:172,21,0	1/1:5,29:35:85.82:678,86,0	1/1:4,18:22:47.86:386,48,0	1/1:6,38:44:78.73:853,79,0	1/1:1,22:23:56.86:460,57,0	1/1:1,15:16:41.95:345,42,0	1/1:2,18:20:53.94:443,54,0	1/1:7,13:20:29.94:246,30,0	1/1:4,19:23:47.93:394,48,0	1/1:2,9:11:20.97:172,21,0	./.	./.	1/1:5,9:15:0.26:187,0,0	1/1:3,26:30:45.24:479,45,0	1/1:5,15:20:29.95:246,30,0	1/1:1,13:15:32.96:271,33,0	1/1:1,19:21:46.97:375,47,0	1/1:2,13:15:6.97:264,7,0	1/1:4,19:23:47.94:393,48,0	1/1:5,23:27:8.15:478,8,0	1/1:5,21:25:21.95:387,22,0	1/1:4,20:24:24.94:411,25,0
chr10	95611124	.	A	AG	32559.34	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.509;DP=784;FS=2.422;HRun=0;HaplotypeScore=73.4466;InbreedingCoeff=0.9999;MQ=89.06;MQ0=0;MQRankSum=-12.243;QD=44.72;ReadPosRankSum=7.741;VQSLOD=4.0962;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:34:90.31:1439,90,0	1/1:0,13:13:36.12:576,36,0	0/0:31,0:31:93.23:0,93,1215	0/0:25,0:25:69.23:0,69,960	1/1:0,31:31:90.31:1439,90,0	1/1:0,34:34:90.31:1439,90,0	1/1:2,21:23:54.18:863,54,0	1/1:0,21:21:60.19:933,60,0	1/1:0,30:30:87.30:1391,87,0	1/1:0,30:30:90.31:1439,90,0	1/1:0,22:22:63.21:1007,63,0	1/1:2,39:41:99:1773,111,0	1/1:0,42:42:99:1871,117,0	1/1:0,25:25:75.26:1199,75,0	1/1:0,33:33:99:1583,99,0	1/1:0,34:34:99:1583,99,0	1/1:0,17:17:51.17:815,51,0	1/1:0,21:21:60.20:959,60,0	1/1:0,27:27:81.27:1268,81,0	1/1:0,26:26:75.26:1199,75,0	1/1:0,55:55:99:2206,138,0	1/1:0,28:28:78.27:1247,78,0	1/1:0,16:16:48.16:767,48,0	1/1:1,24:25:54.18:863,54,0	1/1:0,22:22:66.23:1055,66,0	1/1:0,34:34:99:1583,99,0	1/1:0,31:30:93.32:1487,93,0	1/1:0,13:13:36.12:576,36,0
chr10	95612181	.	CGGAA	C	359.86	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.407;DP=454;FS=19.680;HRun=0;HaplotypeScore=85.8864;InbreedingCoeff=0.9404;MQ=91.53;MQ0=0;MQRankSum=-5.347;QD=35.99;ReadPosRankSum=3.068;VQSLOD=2.1741;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.25:0,72,2040	0/0:13,0:13:39.13:0,39,1130	0/0:22,0:22:63.22:0,63,1758	0/0:19,0:18:51.18:0,51,1387	0/0:9,0:9:21.07:0,21,607	0/0:15,0:15:45.15:0,45,1287	0/0:29,0:29:84.29:0,84,2428	0/0:26,0:26:69.17:0,69,1788	0/0:13,0:13:39.13:0,39,1130	0/0:11,0:11:33.11:0,33,923	0/0:6,0:6:18.06:0,18,521	0/0:23,0:23:69.24:0,69,1963	0/0:19,0:19:57.20:0,57,1604	0/0:16,0:16:48.16:0,48,1362	0/0:17,0:17:51.18:0,51,1441	0/0:13,0:13:36.12:0,36,999	1/1:0,6:6:18.04:264,18,0	1/1:0,4:4:12.04:210,12,0	0/0:24,0:24:69.24:0,69,1991	0/0:4,0:4:12.04:0,12,348	0/0:55,0:55:99:0,166,4762	0/0:10,0:10:30.10:0,30,869	0/0:4,0:4:12.04:0,12,347	0/0:19,0:19:57.20:0,57,1608	0/0:13,0:13:33.11:0,33,951	0/0:17,0:17:51.18:0,51,1470	0/0:16,0:16:48.16:0,48,1381	0/0:7,0:7:21.07:0,21,606
chr10	95612187	.	CCGCTCCGTCCCCTGAGCTGGAAGTGCTTT	C	2030.89	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.393;DP=463;FS=20.860;HRun=0;HaplotypeScore=330.0873;InbreedingCoeff=0.9481;MQ=90.65;MQ0=0;MQRankSum=-5.331;QD=203.09;ReadPosRankSum=2.954;VQSLOD=2.2188;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.22:0,63,7237	0/0:16,0:16:48.10:0,48,4687	0/0:22,0:22:66.23:0,66,4054	0/0:19,0:18:51.04:0,51,2819	0/0:7,0:7:21.07:0,21,2255	0/0:14,0:14:42.13:0,42,4183	0/0:31,0:31:93.20:0,93,9863	0/0:25,0:25:75.21:0,75,4753	0/0:15,0:15:45.15:0,45,5655	0/0:13,0:13:39.13:0,39,4832	0/0:7,0:7:21.07:0,21,2033	0/0:20,0:20:60.19:0,60,6879	0/0:20,0:20:60.21:0,60,7578	0/0:15,0:15:45.06:0,45,4463	0/0:16,0:16:48.15:0,48,5215	0/0:13,0:13:39.13:0,39,3795	1/1:0,6:6:18.06:1237,18,0	1/1:0,4:4:12.04:908,12,0	0/0:25,0:25:75.24:0,75,5548	0/0:4,0:4:12.04:0,12,1551	0/0:59,0:59:99:0,178,19933	0/0:12,0:12:36.12:0,36,4277	0/0:5,0:5:15.05:0,15,1433	0/0:19,0:19:57.15:0,57,6028	0/0:14,0:14:39.07:0,39,4344	0/0:17,0:17:51.18:0,51,5532	0/0:17,0:17:51.18:0,51,6272	0/0:7,0:7:18.06:0,18,1880
chr10	95612364	.	T	TTG	1588.49	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.672;DP=702;FS=27.086;HRun=0;HaplotypeScore=92.4376;InbreedingCoeff=0.7841;MQ=69.49;MQ0=8;MQRankSum=-0.781;QD=33.09;ReadPosRankSum=2.411;VQSLOD=2.8589;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,39:48:74.98:1683,75,0	0/0:10,0:10:24.07:0,24,290	0/0:66,0:34:1.10:0,1,350	0/0:62,0:40:49.52:0,50,467	0/0:14,0:14:36.10:0,36,425	0/0:24,0:24:57.13:0,57,654	0/0:30,0:30:63.17:0,63,749	0/0:32,0:33:59.67:0,60,667	0/0:29,0:29:75.22:0,75,897	0/0:20,0:21:47.61:0,48,551	0/0:10,0:10:24.06:0,24,280	0/0:26,0:27:63.02:0,63,742	0/0:27,0:27:66.19:0,66,789	0/0:22,0:22:66.13:0,66,751	0/0:29,0:29:81.07:0,81,950	0/0:16,0:16:33.10:0,33,400	0/0:38,0:38:87.25:0,87,1041	0/0:20,0:21:50.97:0,51,582	0/0:22,0:22:23.96:0,24,248	0/0:6,0:7:20.89:0,21,223	0/0:27,0:27:54.15:0,54,643	0/0:13,0:13:32.46:0,32,372	0/0:9,0:9:27.08:0,27,327	0/0:32,0:32:87.27:0,87,1053	0/0:20,0:20:57.17:0,57,691	0/0:19,0:19:48.12:0,48,551	0/0:18,0:18:42.12:0,42,499	0/0:6,0:6:12.04:0,12,146
chr10	95613532	.	T	TTTTG	13768.96	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-4.717;DP=845;FS=8.531;HRun=0;HaplotypeScore=151.2356;InbreedingCoeff=0.9971;MQ=67.12;MQ0=5;MQRankSum=1.773;QD=30.80;ReadPosRankSum=-1.061;VQSLOD=3.7994;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:43.22:0,43,908	0/0:13,0:13:27.09:0,27,430	0/0:32,0:21:21.06:0,21,291	0/0:42,0:34:18.03:0,18,243	0/0:31,0:31:54.14:0,54,753	1/1:12,16:31:33.11:755,33,0	1/1:8,11:19:33.11:782,33,0	0/0:27,0:27:21.05:0,21,255	0/0:32,0:32:75.20:0,75,1101	1/1:22,20:42:69.19:1432,69,0	1/1:6,9:18:32.94:675,33,0	1/1:14,15:31:39.13:922,39,0	1/1:19,11:29:45.15:1046,45,0	1/1:10,25:34:48.16:1142,48,0	0/0:41,0:41:81.24:0,81,1206	0/0:30,0:30:45.14:0,45,696	0/0:35,0:33:60.15:0,60,906	0/0:36,0:36:75.19:0,75,1100	1/1:22,4:28:29.91:402,30,0	1/1:11,13:24:39.13:918,39,0	1/1:9,21:30:42.14:999,42,0	1/1:13,12:26:33.11:784,33,0	1/1:6,14:22:24.55:572,25,0	1/1:17,27:47:57.19:1354,57,0	0/0:28,0:28:48.16:0,48,765	1/1:8,16:26:51.02:1061,51,0	1/1:12,20:32:39.13:925,39,0	0/0:17,0:17:36.12:0,36,574
chr10	95614132	.	T	TG	10097.32	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=15.280;DP=608;FS=0.000;HRun=1;HaplotypeScore=206.5354;InbreedingCoeff=0.9989;MQ=77.67;MQ0=0;MQRankSum=-11.651;QD=23.21;ReadPosRankSum=1.678;VQSLOD=4.5689;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1363	1/1:1,9:10:26.86:282,27,0	0/0:16,0:17:45.77:0,46,544	0/0:23,0:22:60.66:0,61,770	1/1:6,16:22:41.89:409,42,0	1/1:4,6:10:26.42:196,26,0	1/1:1,21:22:65.48:509,65,0	0/0:31,0:31:93.29:0,93,1196	1/1:6,20:26:71.92:806,72,0	1/1:6,22:28:83.63:754,84,0	1/1:6,7:13:27.34:211,27,0	1/1:4,18:22:61.09:543,61,0	1/1:6,8:14:35.16:294,35,0	1/1:2,15:17:41.49:353,41,0	1/1:0,34:34:99:1150,102,0	1/1:5,20:25:69.15:815,69,0	0/0:29,0:29:87.28:0,87,1130	0/0:19,0:19:48.11:0,48,591	1/1:4,10:14:42.01:407,42,0	1/1:9,13:21:44.56:345,45,0	1/1:5,19:24:44.94:401,45,0	1/1:10,12:22:40.45:312,40,0	1/1:1,9:10:23.86:188,24,0	1/1:1,27:28:49.01:437,49,0	1/1:6,15:21:37.55:474,38,0	1/1:11,17:28:72.62:688,73,0	1/1:3,20:23:59.81:523,60,0	0/0:19,0:19:57.19:0,57,740
chr10	95614134	.	TCA	T	11066.51	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=14.427;DP=560;FS=3.968;HRun=0;HaplotypeScore=188.8608;InbreedingCoeff=0.9979;MQ=80.52;MQ0=0;MQRankSum=-11.106;QD=28.67;ReadPosRankSum=2.581;VQSLOD=5.9251;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,2127	1/1:0,9:9:27.07:341,27,0	0/0:18,0:18:38.78:0,39,843	0/0:22,0:21:62.42:0,62,1181	1/1:5,16:21:48.04:552,48,0	1/1:3,6:9:26.62:254,27,0	1/1:2,21:23:68.81:640,69,0	0/0:32,0:32:96.33:0,96,1940	1/1:4,21:25:66.42:871,66,0	1/1:0,22:22:66.16:729,66,0	1/1:4,7:11:20.56:230,21,0	1/1:2,18:20:58.82:603,59,0	1/1:1,8:9:23.96:238,24,0	1/1:0,15:15:44.94:461,45,0	1/1:0,34:34:99:1287,102,0	1/1:2,20:22:63.19:846,63,0	0/0:29,0:29:87.30:0,87,1739	0/0:18,0:18:48.16:0,48,974	1/1:2,10:12:36.07:397,36,0	1/1:2,13:15:41.93:383,42,0	1/1:4,19:23:42.06:431,42,0	1/1:4,12:16:25.47:280,25,0	1/1:2,9:11:26.99:245,27,0	1/1:1,27:28:48.08:512,48,0	1/1:4,15:19:35.27:629,35,0	1/1:3,17:21:54.56:558,55,0	1/1:3,18:21:57.06:580,57,0	0/0:19,0:19:57.20:0,57,1158
chr10	95614485	.	TA	T	723.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.497;DP=703;FS=0.000;HRun=2;HaplotypeScore=66.7280;InbreedingCoeff=0.9979;MQ=80.38;MQ0=0;MQRankSum=-3.651;QD=34.43;ReadPosRankSum=2.085;VQSLOD=3.8840;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:63.20:818,63,0	0/0:10,0:10:27.09:0,27,405	0/0:21,0:21:54.05:0,54,753	0/0:15,0:15:39.11:0,39,552	0/0:31,0:31:91.50:0,91,1298	0/0:25,0:25:75.25:0,75,1120	0/0:24,0:24:72.22:0,72,1033	0/0:38,0:38:99:0,114,1652	0/0:20,0:20:60.20:0,60,899	0/0:34,0:34:99:0,99,1468	0/0:27,0:27:81.27:0,81,1202	0/0:26,0:26:78.25:0,78,1149	0/0:36,0:36:99:0,108,1577	0/0:26,0:26:78.26:0,78,1169	0/0:30,0:30:90.29:0,90,1328	0/0:48,0:48:99:0,138,2065	0/0:14,0:14:42.14:0,42,630	0/0:9,0:9:27.09:0,27,405	0/0:23,0:23:69.23:0,69,1030	0/0:32,0:32:93.30:0,93,1336	0/0:35,0:35:99:0,102,1502	0/0:27,0:27:78.26:0,78,1141	0/0:15,0:15:45.15:0,45,666	0/0:17,0:17:51.17:0,51,764	0/0:27,0:27:81.26:0,81,1194	0/0:24,0:24:72.24:0,72,1079	0/0:29,0:29:87.27:0,87,1258	0/0:19,0:19:57.18:0,57,833
chr10	95615624	.	G	GAA	2941.62	PASS	AB=0.967;AC=50;AF=0.926;AN=54;BaseQRankSum=-1.587;DP=412;FS=0.000;HRun=17;HaplotypeScore=78.5892;InbreedingCoeff=0.3387;MQ=45.40;MQ0=23;MQRankSum=-2.123;QD=7.39;ReadPosRankSum=1.629;VQSLOD=0.1672;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:17:9.06:9,0,31	1/1:5,0:3:3.89:37,4,0	0/1:12,0:5:0.60:1,0,17	./.	1/1:16,0:16:8.95:69,9,0	1/1:8,0:6:5.97:57,6,0	1/1:15,0:14:22.19:172,22,0	1/1:23,0:19:24.29:176,24,0	1/1:15,0:13:15.32:117,15,0	1/1:22,0:19:17.31:195,17,0	1/1:8,0:8:1.53:33,2,0	1/1:20,1:21:32.37:175,32,0	1/1:13,0:9:12.24:82,12,0	1/1:10,1:9:10.94:74,11,0	1/1:11,0:10:12.95:85,13,0	1/1:16,0:13:8.99:49,9,0	1/1:22,0:16:9.46:78,9,0	0/0:11,0:9:2.55:0,3,21	1/1:19,0:18:30.31:281,30,0	1/1:18,0:17:30.39:254,30,0	1/1:11,1:11:14.30:95,14,0	1/1:6,1:7:14.40:137,14,0	1/1:11,0:11:23.86:193,24,0	1/1:17,0:13:20.91:165,21,0	1/1:6,0:10:14.49:102,14,0	1/1:26,0:17:14.19:139,14,0	1/1:16,1:15:21.73:181,22,0	1/1:13,0:12:11.25:97,11,0
chr10	95615626	.	A	AAAG	3828.37	PASS	AB=0.986;AC=42;AF=0.778;AN=54;BaseQRankSum=-2.312;DP=401;FS=30.059;HRun=0;HaplotypeScore=81.0190;InbreedingCoeff=-0.2533;MQ=45.03;MQ0=22;MQRankSum=0.992;QD=9.62;ReadPosRankSum=1.835;VQSLOD=1.5167;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:16:13.20:13,0,174	1/1:4,1:3:7.20:46,7,0	0/1:15,0:5:5.99:6,0,15	./.	1/1:15,1:15:0.24:145,0,0	1/1:7,1:6:11.97:124,12,0	1/1:15,0:14:0.86:136,1,0	0/1:20,3:19:42.28:210,0,42	1/1:14,2:13:24.44:248,24,0	1/1:21,0:18:11.86:237,12,0	0/1:8,0:8:1.01:36,0,1	0/1:21,0:20:33.32:109,0,33	0/1:13,0:9:3.59:71,0,4	1/1:11,0:9:5.90:41,6,0	1/1:8,1:8:17.22:147,17,0	1/1:16,0:13:5.89:103,6,0	1/1:21,1:15:18.03:229,18,0	0/1:12,0:10:47.93:48,0,63	0/1:20,0:18:23.96:182,0,24	0/1:16,1:16:10.99:229,0,11	1/1:11,1:11:12.49:151,12,0	0/1:8,0:7:12.67:57,0,13	1/1:10,1:11:22.58:227,23,0	1/1:15,0:11:21.78:175,22,0	0/1:10,0:10:1.20:157,0,1	0/1:25,0:16:6.60:226,0,7	1/1:15,0:13:9.20:160,9,0	1/1:14,3:13:22.64:314,23,0
chr10	95615627	.	A	AAG	4392.15	PASS	AB=0.910;AC=38;AF=0.704;AN=54;BaseQRankSum=-4.114;DP=400;FS=14.437;HRun=0;HaplotypeScore=71.9579;InbreedingCoeff=-0.2671;MQ=45.11;MQ0=21;MQRankSum=1.339;QD=11.56;ReadPosRankSum=2.566;VQSLOD=3.2505;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:0.49:0,0,194	0/1:4,1:3:8.73:53,0,9	0/1:15,0:5:6.32:6,0,26	./.	0/1:14,1:14:47.13:117,0,47	1/1:7,1:6:14.96:136,15,0	1/1:11,4:14:6.91:261,7,0	0/1:20,2:19:86.57:157,0,87	0/1:14,1:12:28.19:102,0,28	1/1:17,4:18:17.26:403,17,0	0/1:7,0:7:8.37:30,0,8	0/1:18,3:20:10.85:235,0,11	1/1:10,2:8:2.32:121,2,0	1/1:9,0:7:6.13:77,6,0	1/1:10,1:10:10.51:83,11,0	0/1:15,1:13:25.23:66,0,25	1/1:22,0:15:9.42:149,9,0	0/1:12,0:10:7.23:7,0,104	0/1:14,6:18:20.06:340,0,20	0/1:12,5:16:10.98:295,0,11	1/1:10,2:11:18.08:175,18,0	0/1:6,3:8:2.61:131,0,3	1/1:5,5:11:32.42:351,32,0	1/1:8,7:11:23.52:307,24,0	0/1:10,0:10:25.77:40,0,26	1/1:18,8:17:12.38:357,12,0	1/1:14,3:15:17.37:270,17,0	0/1:17,0:13:8.38:125,0,8
chr10	95615951	.	C	CA	2418.27	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.608;DP=481;FS=8.370;HRun=7;HaplotypeScore=46.9414;InbreedingCoeff=0.9210;MQ=54.33;MQ0=17;MQRankSum=-0.471;QD=23.03;ReadPosRankSum=1.896;VQSLOD=3.2283;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,31:33:69.21:825,69,0	0/0:5,0:4:12.02:0,12,114	0/0:14,0:6:12.14:0,12,132	0/0:10,0:5:14.67:0,15,109	0/0:20,0:20:47.98:0,48,457	0/0:18,0:18:33.05:0,33,319	0/0:20,0:20:47.86:0,48,445	0/0:26,0:23:51.32:0,51,471	0/0:6,0:6:12.01:0,12,116	0/0:11,0:10:21.03:0,21,203	0/0:13,0:13:27.04:0,27,260	0/0:17,0:17:23.91:0,24,226	0/0:12,0:12:27.03:0,27,255	0/0:15,0:14:27.04:0,27,260	0/0:17,0:17:35.99:0,36,347	0/0:19,0:18:27.04:0,27,260	1/1:4,38:40:87.27:1048,87,0	1/1:5,23:26:57.17:688,57,0	0/0:14,0:11:30.05:0,30,288	0/0:10,0:10:24.03:0,24,232	0/0:20,0:16:36.05:0,36,346	0/0:2,0:2:6.01:0,6,58	0/0:6,0:6:18.03:0,18,174	0/0:32,0:29:45.07:0,45,434	0/0:16,0:16:42.07:0,42,405	0/0:21,0:20:54.09:0,54,521	0/0:15,0:14:33.05:0,33,316	0/0:17,0:16:48.08:0,48,463
chr10	95617870	.	A	ATACTGATTGCCATAGT	93470.04	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.123;DP=611;FS=2.883;HRun=0;HaplotypeScore=223.4040;InbreedingCoeff=0.9814;MQ=61.83;MQ0=0;MQRankSum=-8.078;QD=160.05;ReadPosRankSum=4.702;VQSLOD=4.7881;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,9:35:81.23:4811,81,0	1/1:6,6:13:36.12:2675,36,0	0/0:11,0:11:30.08:0,30,991	0/0:16,0:16:34.55:0,35,1082	1/1:12,10:25:53.96:3705,54,0	1/1:15,9:28:60.21:4318,60,0	1/1:13,3:19:45.15:2346,45,0	1/1:47,0:47:99:6849,123,0	1/1:9,6:17:39.13:3011,39,0	1/1:25,12:37:99:6525,99,0	1/1:8,5:15:42.06:2430,42,0	1/1:12,12:25:69.24:4503,69,0	1/1:10,6:16:42.14:2471,42,0	1/1:14,9:25:60.21:4147,60,0	1/1:10,4:16:39.13:2517,39,0	1/1:16,13:32:81.28:5799,81,0	1/1:13,5:20:45.15:3302,45,0	1/1:14,3:19:45.11:2886,45,0	1/1:16,3:22:60.17:3368,60,0	1/1:12,9:22:60.16:3708,60,0	1/1:15,2:20:30.06:2084,30,0	1/1:9,7:18:42.14:2913,42,0	1/1:10,6:17:39.05:2460,39,0	1/1:6,0:6:12:720,12,0	1/1:8,13:22:57.20:4315,57,0	1/1:15,10:30:90.31:4955,90,0	1/1:15,12:29:78.27:5242,78,0	1/1:3,4:9:21.07:1411,21,0
chr10	95619117	.	G	GC	101.23	PASS	AC=4;AF=0.083;AN=48;BaseQRankSum=-2.210;DP=164;FS=10.896;HRun=1;HaplotypeScore=218.5626;InbreedingCoeff=0.6621;MQ=28.85;MQ0=0;MQRankSum=-0.829;QD=9.20;ReadPosRankSum=-0.624;VQSLOD=-0.2000;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:23.69:0,24,155	0/0:4,0:4:11.89:0,12,82	./.	./.	0/0:14,0:14:34.81:0,35,240	0/0:5,0:5:14.84:0,15,100	0/0:3,0:3:8.94:0,9,71	./.	0/0:6,0:6:17.80:0,18,119	0/0:6,0:6:17.71:0,18,114	0/0:12,0:12:32.70:0,33,227	0/0:3,0:3:8.90:0,9,59	0/0:4,0:4:11.87:0,12,79	0/0:3,0:3:8.92:0,9,61	0/0:16,0:16:41.54:0,42,277	0/0:11,0:11:29.70:0,30,201	1/1:0,4:4:12.04:158,12,0	1/1:0,7:7:6.45:47,6,0	0/0:2,0:1:2.96:0,3,19	0/0:14,0:14:41.66:0,42,291	./.	0/0:4,0:4:11.88:0,12,81	0/0:8,0:8:21.73:0,22,149	0/0:3,0:2:8.90:0,9,59	0/0:7,0:7:17.83:0,18,122	0/0:7,0:6:17.77:0,18,117	0/0:10,0:10:29.65:0,30,197	0/0:2,0:2:5.92:0,6,39
chr10	95619439	.	G	GTC	4765.30	PASS	AB=0.941;AC=45;AF=0.804;AN=56;BaseQRankSum=-5.982;DP=601;FS=2.948;HRun=0;HaplotypeScore=122.7917;InbreedingCoeff=0.2606;MQ=60.18;MQ0=12;MQRankSum=3.788;QD=9.42;ReadPosRankSum=-1.127;VQSLOD=4.3594;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,2:39:41.86:334,42,0	1/1:4,0:4:8.60:68,9,0	0/0:47,0:13:31.93:0,32,295	0/0:48,0:24:34.69:0,35,459	1/1:6,0:6:9.46:76,9,0	1/1:14,1:14:3.59:143,4,0	1/1:27,1:27:17.56:324,18,0	1/1:24,0:24:38.15:421,38,0	1/1:27,0:27:18.52:304,19,0	1/1:11,0:10:16.93:176,17,0	0/1:7,0:7:0.39:51,0,0	1/1:18,0:18:6.75:189,7,0	0/1:18,0:18:31.15:102,0,31	1/1:19,0:19:23.42:240,23,0	0/1:22,0:22:2.79:168,0,3	1/1:17,0:17:22.11:256,22,0	1/1:35,1:36:34.24:250,34,0	1/1:24,2:26:33.46:245,33,0	1/1:10,0:10:20.95:219,21,0	1/1:13,0:13:9.42:98,9,0	0/1:16,39:55:6.77:7,0,79	0/1:14,0:14:3.32:41,0,3	1/1:8,0:7:8.33:74,8,0	0/1:30,0:30:35.26:116,0,35	1/1:18,0:18:33.46:286,33,0	1/1:17,0:17:30.10:322,30,0	1/1:20,0:20:16.15:240,16,0	0/1:4,0:4:5.10:17,0,5
chr10	95619440	.	TCA	T	128.55	PASS	AB=0.977;AC=20;AF=0.370;AN=54;BaseQRankSum=5.566;DP=607;FS=6.400;HRun=0;HaplotypeScore=139.0096;InbreedingCoeff=-0.1454;MQ=60.02;MQ0=12;MQRankSum=-2.464;QD=0.34;ReadPosRankSum=-3.809;VQSLOD=0.6151;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:39:0.47:1,0,0	1/1:2,2:4:3.22:56,3,0	0/0:47,0:13:0.89:0,1,2	0/1:48,0:24:9.11:9,0,54	./.	0/1:15,0:14:12.69:13,0,55	0/0:32,0:31:11.55:0,12,135	0/0:26,0:26:13.30:0,13,160	0/1:25,1:27:13.97:14,0,84	0/1:10,1:10:25.75:37,0,26	0/0:7,0:7:0.27:0,0,53	0/1:18,0:18:9.52:10,0,72	0/0:18,0:18:16.65:0,17,149	0/1:20,0:20:8.40:8,0,65	0/0:21,2:23:8.69:0,9,60	0/1:16,1:17:15.95:16,0,69	0/1:35,0:35:8.26:8,0,16	0/1:26,0:26:8.78:31,0,9	0/0:10,0:10:6.01:0,6,56	0/0:12,0:12:5.33:0,5,48	0/1:54,1:55:5.17:5,0,182	0/0:13,1:14:1.57:0,2,53	1/1:8,0:7:2.04:6,2,0	0/0:30,0:31:23.24:0,23,216	1/1:15,2:17:2.94:18,3,0	0/1:16,1:17:27.55:28,0,86	0/1:20,0:20:9.51:10,0,74	0/0:4,0:4:8.43:0,8,57
chr10	95619466	.	ACACACACACACGCACGCACGCACG	A	1114.29	PASS	AB=0.844;AC=6;AF=0.111;AN=54;BaseQRankSum=4.129;DP=616;FS=1.964;HRun=0;HaplotypeScore=251.3131;InbreedingCoeff=-0.1470;MQ=47.74;MQ0=11;MQRankSum=-4.596;QD=5.71;ReadPosRankSum=-1.628;VQSLOD=1.9640;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:41:24.06:55,0,24	0/0:6,0:6:9.02:0,9,108	0/0:18,0:2:2.98:0,3,22	0/0:27,0:11:19.09:0,19,496	./.	0/0:18,0:17:24.03:0,24,776	0/0:33,0:32:24.18:0,24,509	0/1:33,0:32:99:221,0,451	0/1:24,0:24:20.37:20,0,421	0/0:17,0:15:44.58:0,45,1701	0/0:11,0:11:18.05:0,18,466	0/0:22,0:21:35.64:0,36,1208	0/0:19,0:19:34.81:0,35,1296	0/0:21,0:21:15.15:0,15,556	0/0:15,0:15:8.26:0,8,258	0/0:21,0:21:9.81:0,10,285	0/1:3,40:43:28.23:314,0,28	0/1:7,33:40:27.68:612,0,28	0/0:22,0:22:65.83:0,66,1028	0/0:10,0:10:8.05:0,8,123	0/0:61,0:58:72.25:0,72,3176	0/0:14,0:14:11.83:0,12,342	0/0:8,0:7:5.69:0,6,230	0/0:34,0:34:32.60:0,33,890	0/1:14,0:14:12.81:13,0,19	0/0:20,0:20:51.03:0,51,1523	0/0:12,0:12:19.89:0,20,842	0/0:5,0:5:9.03:0,9,376
chr10	95619470	.	ACACACACGCACGCACGCACG	A	1345.79	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=5.615;DP=623;FS=0.000;HRun=0;HaplotypeScore=231.4573;InbreedingCoeff=0.2924;MQ=48.22;MQ0=12;MQRankSum=-5.107;QD=5.95;ReadPosRankSum=-1.030;VQSLOD=2.1545;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,31:41:3.48:129,3,0	0/1:8,0:8:4.80:5,0,11	0/0:17,0:3:7.84:0,8,201	0/1:25,0:9:4.69:5,0,261	./.	0/0:21,0:20:21:0,21,605	0/0:31,0:30:20.85:0,21,423	0/1:35,0:34:99:617,0,141	0/1:25,0:25:10.17:10,0,211	0/0:18,0:17:46.13:0,46,1381	0/0:11,0:11:15.47:0,15,350	0/0:21,0:20:29.66:0,30,964	0/0:20,0:20:33.93:0,34,1024	0/0:22,0:22:15.02:0,15,388	0/0:15,0:15:8.09:0,8,144	0/0:20,0:20:1.82:0,2,111	1/1:42,0:42:4.46:226,4,0	1/1:36,0:36:12.04:485,12,0	0/0:24,0:24:38.21:0,38,809	0/0:12,0:12:5.01:0,5,52	0/0:60,0:57:74.09:0,74,2492	0/0:14,0:14:11.67:0,12,302	0/0:10,0:9:5.20:0,5,182	0/0:34,0:34:26.82:0,27,806	0/1:14,0:14:7.90:8,0,16	0/0:20,0:20:51:0,51,1194	0/0:12,0:12:16.99:0,17,661	0/0:5,0:5:9.02:0,9,234
chr10	95619472	.	ACACACG	A	1710.62	PASS	AB=0.954;AC=28;AF=0.519;AN=54;BaseQRankSum=5.912;DP=616;FS=0.000;HRun=0;HaplotypeScore=155.3915;InbreedingCoeff=-0.4369;MQ=48.46;MQ0=10;MQRankSum=-1.802;QD=3.32;ReadPosRankSum=3.205;VQSLOD=2.1842;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:39:3.41:19,3,0	1/1:8,0:8:3.09:111,3,0	0/0:15,0:3:6.87:0,7,51	0/1:22,0:9:21.93:22,0,92	./.	0/1:22,0:21:3.22:3,0,58	0/0:15,14:29:12.02:0,12,136	0/1:36,0:35:67.10:67,0,136	0/1:25,0:25:56.38:62,0,56	1/1:18,0:17:2.94:262,3,0	0/1:12,0:12:44.13:65,0,44	0/1:20,0:19:41.30:41,0,62	0/1:21,1:22:17.76:18,0,108	0/1:21,1:22:49.48:49,0,62	0/1:15,0:15:15.34:15,0,21	0/1:20,0:20:53.85:57,0,54	0/1:42,0:42:13.04:51,0,13	0/1:36,0:36:8.28:114,0,8	0/1:24,0:24:32.83:121,0,33	0/0:12,0:12:5.44:0,5,48	0/1:57,0:54:99:366,0,138	0/1:13,1:14:8.51:9,0,50	1/1:10,0:9:3.39:17,3,0	0/0:19,14:33:14.94:0,15,187	1/1:15,0:15:3.41:19,3,0	0/1:9,12:21:58.84:263,0,59	0/1:6,5:11:67.02:76,0,67	0/1:5,0:5:22.70:34,0,23
chr10	95619474	.	ACACG	A	2635.04	PASS	AB=1.000;AC=50;AF=0.926;AN=54;BaseQRankSum=0.431;DP=606;FS=3.082;HRun=0;HaplotypeScore=143.1477;InbreedingCoeff=0.2899;MQ=47.57;MQ0=10;MQRankSum=0.256;QD=4.51;ReadPosRankSum=1.531;VQSLOD=2.4124;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:39:3.83:20,4,0	1/1:8,0:8:5.87:54,6,0	0/0:12,0:3:5.99:0,6,49	0/1:21,0:7:12.83:13,0,38	./.	1/1:19,2:20:8.89:95,9,0	0/1:30,0:29:0.26:0,0,0	1/1:38,0:37:6.75:99,7,0	1/1:23,0:23:8.95:74,9,0	1/1:8,11:18:23.03:290,23,0	1/1:12,0:12:8.99:74,9,0	1/1:11,8:18:11.91:185,12,0	1/1:7,15:22:17.88:208,18,0	1/1:10,13:23:7.90:90,8,0	1/1:15,0:15:7.42:58,7,0	1/1:20,0:20:6.39:57,6,0	1/1:42,0:42:5.95:46,6,0	1/1:36,0:36:9.01:84,9,0	1/1:23,0:23:23.44:170,23,0	1/1:5,6:11:0.47:1,0,0	1/1:55,0:52:35.20:472,35,0	1/1:5,9:14:3.90:52,4,0	1/1:3,7:9:3.01:50,3,0	1/1:31,1:32:5.95:63,6,0	1/1:15,0:15:0.47:1,0,0	1/1:20,0:20:32.93:298,33,0	1/1:9,2:11:9.50:128,10,0	1/1:5,0:5:6.01:56,6,0
chr10	95619476	.	ACG	A	1446.74	PASS	AB=0.972;AC=31;AF=0.574;AN=54;BaseQRankSum=2.193;DP=593;FS=7.279;HRun=0;HaplotypeScore=133.5263;InbreedingCoeff=-0.2671;MQ=48.78;MQ0=9;MQRankSum=-0.800;QD=2.81;ReadPosRankSum=2.423;VQSLOD=2.2194;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:39:3.41:19,3,0	1/1:8,0:8:7.78:42,8,0	0/0:13,0:3:5.27:0,5,48	0/1:18,0:7:16.66:17,0,36	./.	0/1:8,13:20:24.28:55,0,24	0/1:28,1:28:14.87:15,0,118	0/1:38,0:37:20.68:111,0,21	0/1:23,0:23:8.67:9,0,22	1/1:19,0:18:25.22:235,25,0	0/1:12,0:12:26.66:102,0,27	0/1:17,0:16:45.78:46,0,50	0/1:22,0:22:31.75:32,0,82	0/1:21,0:21:23.88:31,0,24	0/0:14,0:14:5.50:0,6,40	1/1:21,0:21:0.78:17,1,0	1/1:42,0:42:3.49:28,3,0	1/1:36,0:36:11.51:65,12,0	0/1:23,0:23:25.72:161,0,26	0/0:11,0:11:2.34:0,2,29	0/1:54,0:51:99:332,0,116	0/1:13,0:13:10.66:11,0,53	1/1:9,0:8:2.96:20,3,0	0/0:31,0:31:16.83:0,17,200	1/1:15,0:15:0.47:2,0,0	0/1:18,0:18:37.70:218,0,38	0/1:11,0:11:32.35:32,0,52	0/1:5,0:5:0.51:1,0,21
chr10	95619480	.	ACGCACGCACG	A	2892.67	PASS	AB=1.000;AC=24;AF=0.444;AN=54;BaseQRankSum=4.049;DP=570;FS=10.000;HRun=0;HaplotypeScore=162.1251;InbreedingCoeff=0.6206;MQ=49.51;MQ0=8;MQRankSum=-4.607;QD=10.29;ReadPosRankSum=0.281;VQSLOD=1.6854;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:39:3.48:55,3,0	1/1:4,2:7:5.89:199,6,0	0/0:9,0:3:9.03:0,9,281	0/0:11,0:6:14.92:0,15,332	./.	0/0:19,0:18:9.03:0,9,188	0/0:29,0:28:2.08:0,2,293	1/1:9,30:38:22.51:1572,23,0	1/1:3,18:21:14.53:318,15,0	0/0:17,0:16:46.42:0,46,808	0/1:13,0:13:2.89:3,0,328	0/0:15,0:15:20.83:0,21,438	0/0:21,0:21:23.66:0,24,415	0/1:20,0:20:57.62:58,0,87	1/1:0,14:14:7.43:206,7,0	1/1:1,18:20:6.41:202,6,0	1/1:42,0:42:4.99:124,5,0	1/1:36,0:36:5.52:210,6,0	0/0:22,0:22:56.98:0,57,835	1/1:10,0:10:0.47:1,0,0	0/0:54,0:51:86.13:0,86,1699	0/0:14,0:14:8.59:0,9,187	0/0:7,0:7:2.37:0,2,58	0/0:31,0:31:26.93:0,27,527	1/1:3,12:15:3.07:11,3,0	0/0:17,0:17:42.14:0,42,759	0/0:10,0:10:14.04:0,14,223	1/1:4,1:5:9.02:115,9,0
chr10	95619484	.	ACGCACG	A	2008.96	PASS	AC=22;AF=0.407;AN=54;BaseQRankSum=7.242;DP=545;FS=7.646;HRun=0;HaplotypeScore=143.9235;InbreedingCoeff=0.7423;MQ=51.10;MQ0=6;MQRankSum=-6.033;QD=8.30;ReadPosRankSum=1.194;VQSLOD=1.8313;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:3.48:37,3,0	1/1:9,0:9:5.89:125,6,0	0/0:9,0:5:15.05:0,15,314	0/0:13,0:8:19.88:0,20,350	./.	0/0:18,0:17:8.38:0,8,77	0/0:27,0:27:18.97:0,19,248	1/1:32,0:31:84.27:1281,84,0	1/1:18,0:19:8.77:160,9,0	0/0:17,0:17:29.60:0,30,489	0/0:10,0:10:18.05:0,18,230	0/0:17,0:16:17.49:0,17,243	0/0:21,0:21:25.25:0,25,279	1/1:18,0:18:0.45:14,0,0	1/1:14,0:14:7.43:98,7,0	1/1:20,0:20:7.27:113,7,0	1/1:41,0:41:6.02:80,6,0	1/1:36,0:36:9.03:131,9,0	0/0:18,0:18:53.14:0,53,544	0/0:10,0:10:2.46:0,2,42	0/0:54,0:51:87.69:0,88,1084	0/0:13,0:13:7.26:0,7,83	0/0:8,0:8:4.79:0,5,49	0/0:28,0:28:20.88:0,21,336	1/1:13,0:14:0.47:1,0,0	0/0:17,0:17:41.30:0,41,488	0/0:10,0:10:13.64:0,14,139	1/1:1,5:6:6.91:149,7,0
chr10	95619488	.	ACG	A	1150.24	PASS	AB=1.000;AC=22;AF=0.407;AN=54;BaseQRankSum=8.725;DP=561;FS=18.278;HRun=0;HaplotypeScore=134.1813;InbreedingCoeff=0.6542;MQ=54.67;MQ0=5;MQRankSum=-7.272;QD=4.69;ReadPosRankSum=4.532;VQSLOD=1.4368;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:3.41:19,3,0	1/1:3,7:10:5.69:74,6,0	0/0:15,0:9:24.88:0,25,321	0/0:16,0:10:26.91:0,27,345	./.	0/0:18,0:18:3.85:0,4,74	0/0:23,0:23:11.61:0,12,152	1/1:31,0:30:83.29:911,83,0	1/1:19,0:19:8.94:84,9,0	0/0:18,0:18:11.72:0,12,314	0/0:11,0:11:19.62:0,20,162	0/0:20,0:19:0.54:0,1,194	0/0:22,0:22:9.49:0,9,187	1/1:17,0:17:0.61:5,1,0	1/1:14,0:14:5.91:40,6,0	1/1:18,2:20:6.38:56,6,0	1/1:40,0:40:5.84:34,6,0	1/1:33,0:33:8.71:47,9,0	0/0:18,0:18:45.59:0,46,366	0/0:13,0:13:11.29:0,11,142	0/0:56,1:55:76.89:0,77,845	0/0:14,0:14:3.62:0,4,119	0/1:8,0:8:2.60:3,0,38	0/0:28,0:28:25.44:0,25,253	0/1:14,0:14:0:0,0,0	0/0:19,0:19:20.76:0,21,344	0/0:12,0:12:6.69:0,7,112	1/1:6,0:6:8.19:51,8,0
chr10	95619493	.	C	CAT	929.69	PASS	AB=0.962;AC=12;AF=0.214;AN=56;BaseQRankSum=2.043;DP=568;FS=2.914;HRun=0;HaplotypeScore=139.3728;InbreedingCoeff=-0.2203;MQ=60.63;MQ0=5;MQRankSum=-4.728;QD=3.76;ReadPosRankSum=-0.518;VQSLOD=2.8123;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:10.15:0,10,66	0/0:10,0:10:0.70:0,1,7	0/0:19,0:14:33.79:0,34,425	0/0:19,0:13:32.61:0,33,423	0/0:13,0:13:2.54:0,3,23	0/1:17,0:17:30.45:30,0,81	0/0:20,1:21:13.88:0,14,184	0/1:35,0:34:8.40:262,0,8	0/0:21,0:21:1.98:0,2,71	0/1:17,2:19:90.10:90,0,285	0/0:9,0:9:20.76:0,21,179	0/1:17,1:17:55.55:56,0,180	0/1:19,1:20:95.82:189,0,96	0/0:15,1:16:5.96:0,6,33	0/0:15,0:15:8.95:0,9,68	0/0:22,0:22:11.50:0,11,72	0/0:42,0:42:5.62:0,6,36	0/0:33,0:33:8.87:0,9,58	0/1:16,0:16:99:210,0,230	0/0:15,0:15:20.93:0,21,253	0/1:52,3:53:93.37:93,0,675	0/0:15,0:15:13.29:0,13,153	0/0:8,0:8:2.83:0,3,41	0/1:20,2:22:63.98:64,0,167	1/1:14,0:14:0.42:1,0,0	0/1:19,1:20:36.69:37,0,350	0/1:11,0:11:35.46:35,0,121	0/0:6,0:6:5.99:0,6,49
chr10	95619589	.	A	AT	1088.80	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.187;DP=628;FS=8.600;HRun=5;HaplotypeScore=62.3802;InbreedingCoeff=0.9957;MQ=78.01;MQ0=0;MQRankSum=-2.047;QD=28.65;ReadPosRankSum=0.506;VQSLOD=3.8124;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,33:38:90.29:1184,90,0	0/0:8,0:8:24.06:0,24,258	0/0:16,0:16:41.93:0,42,428	0/0:14,0:14:25.58:0,26,280	0/0:29,0:29:81.19:0,81,863	0/0:32,0:32:84.20:0,84,895	0/0:15,0:15:42.11:0,42,451	0/0:27,0:27:72.18:0,72,774	0/0:14,0:14:36.09:0,36,387	0/0:25,0:25:72.18:0,72,774	0/0:26,0:26:75.18:0,75,798	0/0:26,0:26:71.21:0,71,747	0/0:15,0:15:39.10:0,39,419	0/0:24,0:24:63.15:0,63,677	0/0:21,0:21:60.15:0,60,645	0/0:24,0:24:63.16:0,63,677	0/0:34,0:34:93.23:0,93,999	0/0:20,0:20:57.14:0,57,613	0/0:14,0:14:39.09:0,39,413	0/0:20,0:20:57.10:0,57,593	0/0:20,0:20:60.15:0,60,644	0/0:25,0:25:72.18:0,72,774	0/0:21,0:21:63.16:0,63,677	0/0:18,0:18:48.10:0,48,507	0/0:28,0:28:78.19:0,78,837	0/0:33,0:33:93.13:0,93,983	0/0:30,0:30:81.16:0,81,854	0/0:11,0:11:30.08:0,30,322
chr10	95622630	.	CGGGAGGCA	C	13795.91	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.508;DP=563;FS=7.033;HRun=0;HaplotypeScore=159.9513;InbreedingCoeff=0.6804;MQ=64.94;MQ0=3;MQRankSum=-4.164;QD=26.68;ReadPosRankSum=6.244;VQSLOD=3.2369;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,17:42:27.09:689,27,0	1/1:1,3:4:9.03:228,9,0	0/0:26,0:21:25.02:0,25,638	0/0:20,0:18:18.06:0,18,542	1/1:13,7:20:15.05:383,15,0	1/1:4,13:17:20.33:607,20,0	1/1:16,7:23:15.05:383,15,0	1/1:13,4:17:12.04:306,12,0	1/1:5,16:21:33.11:842,33,0	1/1:16,8:24:21.07:529,21,0	1/1:8,3:11:3.01:77,3,0	1/1:13,12:25:30.10:766,30,0	1/1:9,10:19:33.11:842,33,0	1/1:8,12:20:30.10:766,30,0	1/1:13,14:27:36.12:919,36,0	1/1:6,15:21:45.15:1148,45,0	1/1:12,12:23:17.18:458,17,0	1/1:12,5:17:6.02:153,6,0	1/1:11,4:15:9.01:176,9,0	1/1:12,8:20:21.07:536,21,0	1/1:19,13:32:9.96:303,10,0	1/1:10,9:19:27.09:689,27,0	1/1:8,2:10:3.01:77,3,0	1/1:13,7:20:13.29:379,13,0	1/1:9,5:14:7.31:227,7,0	1/1:14,13:27:39.13:937,39,0	1/1:7,14:21:38.55:995,39,0	1/1:2,5:7:15.05:383,15,0
chr10	95623033	.	AGAGAGAGAGTGT	A	4825.02	PASS	AB=0.979;AC=28;AF=0.500;AN=56;BaseQRankSum=10.981;DP=525;FS=24.292;HRun=0;HaplotypeScore=268.7644;InbreedingCoeff=-0.2037;MQ=41.54;MQ0=14;MQRankSum=-5.331;QD=12.83;ReadPosRankSum=5.717;VQSLOD=2.2580;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:37:18.84:19,0,271	1/1:3,0:3:4.46:74,4,0	0/0:24,0:12:22.93:0,23,580	0/0:47,0:15:21.46:0,21,483	0/0:23,0:23:18.70:0,19,672	1/1:16,1:17:6.99:425,7,0	1/1:18,0:18:12.04:232,12,0	0/1:31,0:27:99:344,0,309	0/1:20,0:20:10.47:10,0,673	0/1:14,0:13:39.46:232,0,39	0/1:11,1:12:34.56:52,0,35	0/1:24,1:24:13.62:598,0,14	0/1:17,1:18:34.88:451,0,35	1/1:13,0:12:16.27:277,16,0	0/0:31,0:30:40.90:0,41,1200	0/1:20,0:20:40.02:40,0,890	0/1:20,0:20:71.83:72,0,813	0/1:11,0:11:41.12:41,0,557	0/1:10,0:10:16.91:70,0,17	1/1:12,0:12:21.05:301,21,0	0/1:16,0:15:10.74:11,0,98	1/1:9,0:9:5.47:110,5,0	0/1:16,0:16:10.38:161,0,10	0/0:16,0:16:2.82:0,3,29	0/0:8,0:8:12.03:0,12,361	0/1:23,1:23:99:523,0,158	0/1:17,3:20:46.62:652,0,47	0/1:9,0:9:48.38:130,0,48
chr10	95623035	.	AGAGAGAGTGT	A	6964.26	PASS	AB=0.908;AC=30;AF=0.536;AN=56;BaseQRankSum=10.456;DP=516;FS=21.510;HRun=0;HaplotypeScore=252.7034;InbreedingCoeff=-0.0388;MQ=41.58;MQ0=14;MQRankSum=-5.695;QD=18.77;ReadPosRankSum=6.036;VQSLOD=1.9378;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:35:18.39:18,0,170	1/1:3,0:3:4.96:75,5,0	0/0:25,0:13:25.94:0,26,629	0/0:47,0:17:27.23:0,27,555	0/0:22,0:22:14.78:0,15,468	0/1:12,5:17:19.47:576,0,19	1/1:2,16:18:12.04:386,12,0	0/1:30,0:26:99:346,0,198	0/1:21,0:21:48.79:49,0,485	1/1:13,1:13:26:395,26,0	0/1:10,2:12:4.35:58,0,4	1/1:18,8:25:15.18:950,15,0	0/1:14,4:18:3.60:639,0,4	0/1:9,3:11:13.58:508,0,14	0/0:28,0:27:1.96:0,2,797	0/1:18,0:18:43.01:43,0,665	0/1:20,0:20:99:145,0,542	0/1:11,0:11:77.85:78,0,391	1/1:9,1:10:1.52:132,2,0	1/1:7,5:12:21.05:423,21,0	0/0:16,0:15:11.34:0,11,70	0/1:7,2:9:8.83:182,0,9	0/1:10,5:15:5.45:316,0,5	1/1:15,2:17:9.01:65,9,0	0/0:7,0:7:9.03:0,9,259	0/1:22,3:24:2.67:783,0,3	1/1:15,3:18:4.58:659,5,0	0/1:9,0:9:72.81:136,0,73
chr10	95623041	.	AGTGT	A	4482.02	PASS	AB=1.000;AC=43;AF=0.796;AN=54;BaseQRankSum=5.671;DP=446;FS=3.529;HRun=0;HaplotypeScore=214.2621;InbreedingCoeff=0.3365;MQ=44.54;MQ0=12;MQRankSum=-3.043;QD=12.59;ReadPosRankSum=5.039;VQSLOD=4.4503;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:30:15.75:31,0,16	1/1:3,0:3:6.02:77,6,0	0/0:28,0:16:34.46:0,34,764	0/0:44,0:20:32.62:0,33,714	1/1:17,0:17:1.86:11,2,0	1/1:14,0:14:24.95:287,25,0	1/1:17,0:17:12.04:148,12,0	1/1:15,12:23:30.01:401,30,0	0/1:20,0:20:13.78:101,0,14	1/1:9,0:8:21.07:284,21,0	1/1:10,0:10:3.31:27,3,0	1/1:20,0:19:33.10:390,33,0	1/1:15,0:15:27.07:313,27,0	1/1:9,0:10:18.05:213,18,0	0/1:22,0:21:28.50:28,0,50	0/1:18,0:18:55.18:55,0,75	1/1:13,0:19:18.02:229,18,0	1/1:8,0:11:18.06:235,18,0	1/1:10,0:10:4.33:75,4,0	1/1:10,0:10:21.04:240,21,0	0/0:11,0:10:2.39:0,2,17	1/1:9,0:9:6.02:70,6,0	1/1:13,0:13:9.03:111,9,0	0/1:14,0:14:0.20:1,0,0	./.	1/1:17,0:17:45.12:575,45,0	1/1:13,0:13:33.09:386,33,0	1/1:6,0:6:15.05:193,15,0
chr10	95623043	.	T	TGA	2907.32	PASS	AB=0.891;AC=40;AF=0.714;AN=56;BaseQRankSum=-1.851;DP=402;FS=0.000;HRun=0;HaplotypeScore=200.2487;InbreedingCoeff=0.4275;MQ=47.96;MQ0=11;MQRankSum=-0.863;QD=10.27;ReadPosRankSum=-3.351;VQSLOD=2.7968;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,9:28:12.44:86,12,0	1/1:2,0:2:6.02:76,6,0	0/0:29,0:17:21.94:0,22,505	0/0:45,0:22:49.98:0,50,609	1/1:10,3:13:3.76:44,4,0	1/1:11,0:11:4.95:120,5,0	1/1:16,0:16:1.29:49,1,0	1/1:24,0:20:45.95:493,46,0	1/1:12,4:16:24.03:257,24,0	1/1:9,0:8:22.62:274,23,0	1/1:9,0:9:0.56:2,1,0	0/0:18,0:17:7.98:0,8,47	0/1:13,0:13:11.87:77,0,12	0/0:8,0:8:0.60:0,1,27	1/1:16,5:20:16.71:158,17,0	1/1:14,3:17:24.05:272,24,0	1/1:17,0:17:13.30:101,13,0	1/1:11,0:11:10.89:81,11,0	1/1:3,0:3:0.66:37,1,0	0/1:9,0:10:2.24:122,0,2	0/1:7,4:10:4.21:4,0,8	0/0:7,0:7:4.44:0,4,14	0/0:12,0:12:4.40:0,4,15	1/1:10,3:13:1.60:5,2,0	1/1:2,2:4:2.50:10,2,0	1/1:17,0:16:9.33:404,9,0	0/1:11,0:12:2.70:206,0,3	1/1:6,0:6:15.05:187,15,0
chr10	95623083	.	G	GTGTTGTGTGGGTCTGAT	68754.78	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.975;DP=534;FS=0.000;HRun=0;HaplotypeScore=239.4893;InbreedingCoeff=0.9523;MQ=62.22;MQ0=0;MQRankSum=-7.143;QD=137.24;ReadPosRankSum=2.661;VQSLOD=4.6631;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,17:38:87.77:6445,88,0	1/1:2,2:9:12.04:996,12,0	0/0:11,0:11:27.02:0,27,850	0/0:22,0:21:35.91:0,36,1333	1/1:1,8:14:24.08:1632,24,0	1/1:7,4:15:30.07:1968,30,0	1/1:18,2:20:39.09:2314,39,0	1/1:35,0:35:99:6532,102,0	1/1:3,8:18:30.10:2279,30,0	1/1:7,8:23:59.98:3876,60,0	1/1:3,5:12:21.07:1341,21,0	1/1:11,7:23:45.11:2853,45,0	1/1:3,5:15:18.06:1489,18,0	1/1:6,7:18:36.08:2497,36,0	1/1:6,9:22:35.72:2619,36,0	1/1:3,7:19:29.05:2326,29,0	1/1:8,12:24:54.19:4172,54,0	1/1:3,4:12:18.06:1210,18,0	1/1:8,0:8:15.05:874,15,0	1/1:6,9:23:39.10:2787,39,0	1/1:9,6:18:30.10:2069,30,0	1/1:7,6:18:33.06:2348,33,0	1/1:9,7:20:35.92:2583,36,0	1/1:8,5:17:18.53:1250,19,0	1/1:3,5:13:15.05:1244,15,0	1/1:8,9:26:75.21:4756,75,0	1/1:10,9:27:60.10:3971,60,0	1/1:3,7:12:30.10:2325,30,0
chr10	95623405	.	A	AT	5423.77	PASS	AB=0.971;AC=32;AF=0.571;AN=56;BaseQRankSum=-10.217;DP=447;FS=6.979;HRun=8;HaplotypeScore=49.5846;InbreedingCoeff=0.8438;MQ=78.28;MQ0=1;MQRankSum=1.310;QD=23.58;ReadPosRankSum=0.779;VQSLOD=5.2623;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:86.24:0,86,768	0/0:4,0:4:6:0,6,55	0/1:14,1:14:3.55:4,0,93	0/1:11,0:9:1.02:1,0,22	0/0:20,0:20:50.96:0,51,457	1/1:0,13:13:39.12:450,39,0	1/1:1,13:14:30.09:346,30,0	0/0:32,0:31:68.93:0,69,615	0/0:15,0:15:36.02:0,36,330	1/1:6,15:21:42.11:476,42,0	1/1:5,14:19:42.12:484,42,0	1/1:2,11:13:27.08:312,27,0	1/1:2,10:12:18.05:208,18,0	1/1:1,5:6:9.03:104,9,0	0/0:6,0:6:15:0,15,134	0/0:12,0:12:33:0,33,296	0/0:31,0:31:75.03:0,75,686	0/0:33,0:33:91.86:0,92,828	1/1:2,18:20:54.15:615,54,0	1/1:2,8:10:24.07:277,24,0	1/1:1,7:8:21.06:242,21,0	1/1:0,1:1:3.01:35,3,0	1/1:1,7:8:21.06:242,21,0	1/1:1,3:4:6.02:69,6,0	0/0:13,0:13:36.02:0,36,329	1/1:2,21:23:63.14:694,63,0	1/1:5,26:31:75.22:865,75,0	0/0:17,0:17:48.01:0,48,434
chr10	95623924	.	C	CTT	5993.18	PASS	AB=0.805;AC=22;AF=0.393;AN=56;BaseQRankSum=-3.613;DP=624;FS=3.091;HRun=12;HaplotypeScore=109.5424;InbreedingCoeff=0.7993;MQ=70.59;MQ0=3;MQRankSum=-2.394;QD=21.87;ReadPosRankSum=-1.467;VQSLOD=4.0562;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,18:41:57.60:911,58,0	1/1:7,5:12:33.91:416,34,0	0/0:19,0:14:20.05:0,20,146	0/1:20,0:14:1.69:2,0,95	1/1:19,17:41:33.70:791,34,0	0/0:18,0:21:38.35:0,38,376	0/0:14,0:14:39:0,39,354	1/1:10,16:29:33.32:643,33,0	1/1:7,9:18:47.57:584,48,0	0/0:19,0:22:27.38:0,27,283	0/0:17,0:18:27.56:0,28,279	0/0:18,0:19:48.97:0,49,430	0/0:17,0:18:32.72:0,33,289	0/0:17,0:17:23.87:0,24,222	1/1:14,13:28:51.90:684,52,0	1/1:5,6:13:1.30:284,1,0	1/1:6,11:18:42.51:540,43,0	0/1:9,8:19:12.71:405,0,13	0/0:25,0:28:60.81:0,61,516	0/0:27,0:29:53.82:0,54,546	0/0:16,0:16:38.97:0,39,361	0/0:30,0:31:59.22:0,59,509	0/0:23,0:23:41.20:0,41,387	0/0:21,0:21:43.80:0,44,392	1/1:9,6:18:38.91:450,39,0	0/0:29,0:29:59.89:0,60,555	0/0:23,1:24:5.98:0,6,374	1/1:2,7:11:1.03:284,1,0
chr10	95623995	.	GAGCT	G	20761.31	PASS	AB=0.558;AC=48;AF=0.857;AN=56;BaseQRankSum=-5.114;DP=561;FS=1.365;HRun=0;HaplotypeScore=111.5076;InbreedingCoeff=0.4570;MQ=64.66;MQ0=5;MQRankSum=-0.621;QD=40.63;ReadPosRankSum=6.067;VQSLOD=4.6873;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:22:48.16:883,48,0	1/1:1,15:16:30.10:552,30,0	0/0:22,0:15:42.14:0,42,962	0/0:28,0:21:39.40:0,39,1148	1/1:4,17:20:39.13:702,39,0	1/1:2,21:23:48.16:883,48,0	1/1:2,12:14:33.11:607,33,0	1/1:7,19:21:45.15:818,45,0	1/1:1,14:15:45.15:828,45,0	0/1:4,19:22:21.57:922,0,22	1/1:2,17:19:48.16:860,48,0	1/1:0,17:17:48.16:883,48,0	1/1:0,12:12:27.09:479,27,0	1/1:2,16:17:39.13:717,39,0	1/1:0,17:17:42.14:773,42,0	1/1:0,16:16:39.13:718,39,0	1/1:3,20:22:51.17:938,51,0	1/1:3,10:12:30.10:550,30,0	0/1:5,17:21:99:881,0,101	1/1:3,31:34:75.22:1345,75,0	0/1:4,12:16:43.78:554,0,44	1/1:4,26:30:66.23:1211,66,0	1/1:0,14:14:30.10:552,30,0	1/1:5,12:17:26.97:497,27,0	1/1:2,16:18:42.14:773,42,0	0/1:5,23:27:0.49:1183,0,0	1/1:1,28:29:72.08:1324,72,0	1/1:1,7:8:18.06:329,18,0
chr10	95625929	.	C	CA	2503.47	PASS	AB=0.824;AC=48;AF=0.889;AN=54;BaseQRankSum=4.370;DP=455;FS=4.693;HRun=18;HaplotypeScore=109.5611;InbreedingCoeff=0.1830;MQ=62.41;MQ0=0;MQRankSum=-0.336;QD=5.68;ReadPosRankSum=2.703;VQSLOD=2.5462;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,1:14:8.21:35,8,0	0/1:5,2:7:13.41:13,0,19	0/0:13,0:9:5.94:0,6,29	./.	1/1:36,3:39:15.23:206,15,0	1/1:21,0:21:29.95:125,30,0	1/1:18,0:18:37.65:163,38,0	0/1:17,0:17:8.41:14,0,8	1/1:11,0:11:7.68:33,8,0	1/1:18,0:18:25.89:117,26,0	1/1:20,0:20:48.63:205,49,0	1/1:11,0:11:23.93:101,24,0	1/1:12,0:12:19.21:88,19,0	1/1:19,0:19:34.83:148,35,0	1/1:8,8:17:21.63:139,22,0	0/1:4,5:9:1.97:53,0,2	1/1:7,1:21:11.50:64,11,0	1/1:4,1:7:8.69:50,9,0	1/1:13,0:13:13.99:65,14,0	1/1:23,0:23:30.18:130,30,0	1/1:12,0:12:13.72:59,14,0	1/1:21,0:21:28.71:118,29,0	1/1:30,0:31:56.72:243,57,0	1/1:6,0:6:8.09:34,8,0	1/1:3,7:9:5.82:36,6,0	1/1:24,0:24:43.22:184,43,0	1/1:25,0:25:35.73:160,36,0	0/1:9,2:14:26.57:42,0,27
chr10	95625933	.	A	AC	4730.37	PASS	AB=0.651;AC=25;AF=0.463;AN=54;BaseQRankSum=7.726;DP=470;FS=25.118;HRun=0;HaplotypeScore=91.0267;InbreedingCoeff=0.6090;MQ=57.88;MQ0=0;MQRankSum=2.448;QD=16.14;ReadPosRankSum=10.004;VQSLOD=3.6012;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:20.83:0,21,157	0/0:8,0:8:22.97:0,23,207	0/0:12,0:6:17.85:0,18,156	./.	0/0:35,0:35:93.69:0,94,658	1/1:10,11:22:30.92:364,31,0	1/1:5,15:20:45.45:313,45,0	0/0:19,0:19:41.17:0,41,339	0/0:10,0:10:29.10:0,29,226	1/1:9,10:19:15.74:328,16,0	0/1:10,17:27:41.21:365,0,41	1/1:1,10:11:3.33:184,3,0	0/1:7,8:15:31.81:182,0,32	1/1:5,13:18:49.69:379,50,0	0/0:14,0:14:23.04:0,23,137	0/0:9,0:9:18.50:0,19,124	0/0:22,0:21:22.62:0,23,139	0/0:7,0:7:17.07:0,17,111	0/1:12,6:18:65.38:185,0,65	1/1:3,22:25:2.97:368,3,0	1/1:5,5:10:9.91:165,10,0	1/1:8,10:18:45.34:344,45,0	1/1:10,22:32:47.27:572,47,0	0/1:3,4:7:5.58:82,0,6	0/0:11,0:10:14.20:0,14,108	0/1:9,17:26:1.43:443,0,1	1/1:13,12:25:29.38:457,29,0	0/0:17,0:17:48.11:0,48,414
chr10	95625938	.	A	AAAC	7937.74	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=6.127;DP=457;FS=3.430;HRun=0;HaplotypeScore=94.2822;InbreedingCoeff=0.8325;MQ=60.01;MQ0=0;MQRankSum=-1.078;QD=26.64;ReadPosRankSum=7.008;VQSLOD=4.7011;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:0.92:0,1,113	0/0:9,0:9:26.91:0,27,260	0/0:13,0:7:13.85:0,14,121	0/0:3,0:1:0:0,0,0	0/0:35,0:35:64.05:0,64,588	1/1:6,11:18:32.28:518,32,0	1/1:5,15:20:45.44:621,45,0	0/0:21,0:21:46.94:0,47,404	0/0:9,0:9:23.50:0,24,174	1/1:7,10:17:44.40:490,44,0	1/1:11,17:28:74.45:913,74,0	1/1:3,8:11:29.82:361,30,0	1/1:6,8:14:40.68:407,41,0	1/1:3,13:16:43.39:514,43,0	0/0:14,0:14:28.52:0,29,203	0/0:10,0:10:20.79:0,21,172	0/1:22,0:21:11.15:11,0,72	0/0:6,0:6:14.10:0,14,90	1/1:11,6:17:42.39:411,42,0	1/1:14,9:23:19.21:475,19,0	1/1:5,5:10:26.52:289,27,0	1/1:6,10:17:14.28:441,14,0	1/1:9,22:31:69.84:932,70,0	1/1:2,4:6:9.11:138,9,0	0/0:11,0:10:3.46:0,3,66	1/1:9,16:25:72.68:797,73,0	1/1:11,11:23:49.35:619,49,0	0/0:16,0:16:45.54:0,46,428
chr10	95628246	.	GTT	G	2842.90	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=1.476;DP=601;FS=22.567;HRun=3;HaplotypeScore=119.6171;InbreedingCoeff=0.1594;MQ=47.07;MQ0=26;MQRankSum=0.096;QD=6.25;ReadPosRankSum=0.843;VQSLOD=-0.7245;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,1:31:35.05:410,35,0	1/1:11,0:11:16.49:129,16,0	0/0:29,0:15:19.85:0,20,251	0/0:28,0:14:18.29:0,18,229	1/1:20,0:18:33.37:261,33,0	0/1:16,0:15:37.98:38,0,193	0/1:29,0:23:0.55:1,0,241	1/1:22,0:20:35.19:383,35,0	1/1:18,0:16:28.72:208,29,0	0/1:20,0:18:73.09:136,0,73	0/1:16,0:15:25.34:25,0,168	0/0:17,0:16:2.68:0,3,176	0/1:21,0:19:9.95:10,0,225	0/1:19,0:18:55.65:56,0,148	1/1:22,0:21:13.92:161,14,0	1/1:15,1:16:16.82:143,17,0	1/1:23,0:22:2.70:147,3,0	1/1:20,0:18:28.29:267,28,0	0/0:30,0:27:29.01:0,29,534	0/1:17,0:16:59.15:59,0,149	0/0:25,0:19:8.90:0,9,196	0/1:24,0:23:65.68:66,0,136	0/0:11,6:16:26.51:0,27,199	0/1:25,0:24:30.83:31,0,137	1/1:15,0:15:29.43:267,29,0	0/1:27,0:25:69.12:69,0,294	0/1:31,0:29:32.54:33,0,277	1/1:10,1:9:8.78:131,9,0
chr10	95628746	.	TA	T	14052.31	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.423;DP=568;FS=4.204;HRun=7;HaplotypeScore=80.3951;InbreedingCoeff=0.9276;MQ=72.45;MQ0=0;MQRankSum=-5.567;QD=26.02;ReadPosRankSum=3.267;VQSLOD=5.6258;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:75.13:753,75,0	1/1:1,3:4:9.02:92,9,0	0/0:16,0:15:9.17:0,9,316	0/0:12,0:12:21.28:0,21,332	1/1:2,29:31:87.15:876,87,0	1/1:2,23:25:66.15:673,66,0	1/1:0,8:8:21.05:214,21,0	1/1:8,37:45:99:1105,111,0	1/1:0,15:15:39.07:390,39,0	1/1:2,40:42:99:1206,120,0	1/1:2,22:24:66.03:648,66,0	1/1:1,20:21:48.11:489,48,0	1/1:3,13:16:30.06:306,30,0	1/1:1,14:15:36.08:367,36,0	1/1:1,16:17:42.09:428,42,0	1/1:0,12:12:29.75:306,30,0	1/1:1,15:16:35.60:366,36,0	1/1:2,11:13:26.31:327,26,0	1/1:1,23:24:69.13:686,69,0	1/1:3,26:29:72.15:734,72,0	1/1:0,6:6:15.03:153,15,0	1/1:0,14:14:39.09:398,39,0	1/1:1,19:20:48:489,48,0	1/1:2,20:22:51.11:519,51,0	1/1:0,26:26:75.17:764,75,0	1/1:2,19:21:57.11:573,57,0	1/1:1,33:34:87.20:887,87,0	1/1:0,10:10:30.07:306,30,0
chr10	95630681	.	A	AT	12289.53	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-9.952;DP=485;FS=2.617;HRun=8;HaplotypeScore=42.6252;InbreedingCoeff=0.9608;MQ=69.62;MQ0=0;MQRankSum=0.144;QD=28.92;ReadPosRankSum=0.633;VQSLOD=5.0778;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.02:0,51,467	1/1:0,7:7:21.06:242,21,0	0/0:5,0:6:15.09:0,15,101	0/0:6,0:6:9:0,9,82	1/1:5,24:28:72.13:797,72,0	1/1:0,20:20:60.18:692,60,0	1/1:1,6:7:18.05:208,18,0	1/1:7,23:30:66.20:762,66,0	1/1:0,11:11:27.08:312,27,0	1/1:4,21:25:60.18:693,60,0	1/1:2,24:26:72.21:831,72,0	1/1:2,14:16:36.11:415,36,0	1/1:1,19:21:54.16:621,54,0	1/1:1,14:15:36.11:416,36,0	1/1:1,19:20:54.16:623,54,0	1/1:1,15:16:45.13:519,45,0	0/0:11,0:11:30.01:0,30,275	0/0:18,0:18:41.99:0,42,378	1/1:2,10:12:30.09:346,30,0	1/1:4,23:27:63.15:712,63,0	1/1:1,7:8:21.06:242,21,0	1/1:1,7:8:15:158,15,0	1/1:3,21:24:56.99:658,57,0	1/1:1,8:9:24.07:277,24,0	1/1:0,26:26:72.21:831,72,0	1/1:5,30:35:90.23:1015,90,0	1/1:3,24:27:72.16:815,72,0	1/1:3,3:6:9.03:104,9,0
chr10	95631784	.	GA	G	14371.03	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.386;DP=519;FS=8.784;HRun=6;HaplotypeScore=51.4075;InbreedingCoeff=0.9336;MQ=68.97;MQ0=0;MQRankSum=-4.544;QD=28.29;ReadPosRankSum=2.784;VQSLOD=5.2518;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:45.11:484,45,0	1/1:0,14:14:39.10:419,39,0	0/0:6,0:6:9.03:0,9,118	0/0:4,0:5:11.93:0,12,134	1/1:3,43:46:99:1322,123,0	1/1:0,18:18:51.13:548,51,0	1/1:0,15:15:36.09:387,36,0	1/1:2,34:36:99:1064,99,0	1/1:1,14:15:36.09:387,36,0	1/1:0,23:23:69.16:734,69,0	1/1:1,18:19:54.14:580,54,0	1/1:0,12:12:33.08:355,33,0	1/1:2,26:28:75.19:806,75,0	1/1:2,22:24:57.14:612,57,0	1/1:3,16:19:45.11:484,45,0	1/1:2,11:13:33.08:355,33,0	1/1:2,18:20:45.11:484,45,0	1/1:1,9:10:27.07:290,27,0	1/1:1,12:13:36.09:387,36,0	1/1:3,39:42:99:1224,114,0	1/1:0,5:5:12.03:129,12,0	1/1:3,20:23:57.14:613,57,0	1/1:2,20:22:60.15:645,60,0	1/1:1,9:10:27.07:290,27,0	1/1:0,18:18:51.13:548,51,0	1/1:0,20:20:60.11:626,60,0	1/1:4,12:16:33.08:355,33,0	1/1:1,7:8:24.03:246,24,0
chr10	95632193	.	TGTGC	T	10216.68	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=14.199;DP=557;FS=0.744;HRun=0;HaplotypeScore=96.5135;InbreedingCoeff=0.9969;MQ=61.43;MQ0=4;MQRankSum=-2.537;QD=35.47;ReadPosRankSum=3.613;VQSLOD=5.0967;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:63.18:0,63,1430	0/0:6,0:6:18.03:0,18,378	0/0:27,0:19:42.06:0,42,745	0/0:31,0:21:41.94:0,42,792	0/0:20,0:20:60.21:0,60,1420	1/1:0,18:18:48.16:831,48,0	1/1:4,14:18:21.07:360,21,0	0/0:25,0:25:57.14:0,57,1177	0/0:18,0:18:49.02:0,49,1071	1/1:1,12:13:36.08:563,36,0	1/1:2,15:17:42.14:730,42,0	1/1:5,15:20:42.14:714,42,0	1/1:0,23:23:63.22:1080,63,0	1/1:6,18:24:45.15:768,45,0	0/0:18,0:18:54.14:0,54,1151	0/0:21,0:21:51.13:0,51,1196	0/0:15,0:15:30.10:0,30,745	0/0:22,0:22:45.12:0,45,1086	1/1:6,12:18:36.08:527,36,0	1/1:1,16:17:36.12:594,36,0	1/1:2,33:35:69.24:1199,69,0	1/1:2,12:14:30.10:505,30,0	1/1:1,11:12:18.06:313,18,0	1/1:5,19:24:39.13:678,39,0	0/0:10,0:10:30.10:0,30,742	1/1:1,16:17:48.14:779,48,0	1/1:3,15:18:33.11:574,33,0	0/0:28,0:28:78.22:0,78,1916
chr10	95632476	.	AT	A	5525.85	PASS	AB=0.762;AC=48;AF=0.889;AN=54;BaseQRankSum=-4.160;DP=433;FS=0.000;HRun=11;HaplotypeScore=62.5433;InbreedingCoeff=0.4926;MQ=79.49;MQ0=4;MQRankSum=-4.988;QD=13.51;ReadPosRankSum=4.805;VQSLOD=4.8827;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,14:19:12.96:313,13,0	1/1:3,0:8:10.18:29,10,0	0/0:23,0:17:17.30:0,17,136	0/1:11,0:7:8.06:8,0,80	1/1:2,0:23:42.77:124,43,0	1/1:9,15:24:41.92:345,42,0	0/1:1,10:11:2.01:192,0,2	1/1:5,0:34:50.43:143,50,0	1/1:0,0:10:16.30:47,16,0	1/1:5,19:24:56.91:468,57,0	1/1:5,15:20:41.90:345,42,0	1/1:0,12:13:38:302,38,0	1/1:1,17:18:47.94:394,48,0	1/1:1,16:17:44.95:369,45,0	1/1:3,0:15:20.37:59,20,0	1/1:0,0:16:30.56:88,31,0	0/0:1,0:1:0.47:0,0,1	./.	1/1:3,24:27:71.88:589,72,0	1/1:3,13:16:35.88:288,36,0	1/1:1,5:6:14.98:123,15,0	1/1:3,3:6:8.98:74,9,0	1/1:0,10:10:23.97:197,24,0	1/1:3,4:7:11.98:99,12,0	1/1:1,0:14:24.44:71,24,0	1/1:4,22:26:65.87:533,66,0	1/1:3,14:17:3.97:239,4,0	1/1:0,0:15:30.56:88,31,0
chr10	95635360	.	G	GA	1996.05	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=7.217;DP=459;FS=16.940;HRun=1;HaplotypeScore=100.7383;InbreedingCoeff=0.9220;MQ=61.88;MQ0=17;MQRankSum=-3.800;QD=13.05;ReadPosRankSum=2.218;VQSLOD=1.4661;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:13.42:134,13,0	1/1:6,1:7:17.81:135,18,0	0/0:38,0:13:12.24:0,12,174	0/0:46,0:16:13.02:0,13,133	1/1:28,0:25:51.37:356,51,0	0/0:18,0:18:37.37:0,37,228	0/0:9,0:9:14.74:0,15,100	1/1:32,0:30:68.84:504,69,0	1/1:8,0:8:20.69:139,21,0	0/0:19,0:18:30.10:0,30,222	0/0:11,0:10:14.56:0,15,91	0/0:10,0:10:19.48:0,19,124	0/0:14,0:14:25.44:0,25,213	0/0:13,0:13:26.36:0,26,202	1/1:19,0:19:41.58:298,42,0	1/1:9,0:9:20.60:148,21,0	0/0:7,13:17:0.89:0,1,2	1/1:15,0:13:15.15:146,15,0	0/0:25,0:21:33.57:0,34,278	0/0:14,0:12:24.05:0,24,144	0/0:7,0:6:7.95:0,8,90	0/0:3,0:3:6.01:0,6,55	0/0:9,0:7:17.88:0,18,138	0/0:9,0:8:14.43:0,14,116	1/1:14,0:14:25.16:185,25,0	0/0:22,0:22:42.22:0,42,327	0/0:19,0:19:32.35:0,32,238	1/1:8,0:8:23.33:165,23,0
chr10	95635399	.	C	CTCACTATG	5954.04	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=2.108;DP=354;FS=22.792;HRun=0;HaplotypeScore=105.9245;InbreedingCoeff=0.9319;MQ=66.90;MQ0=5;MQRankSum=-9.596;QD=67.66;ReadPosRankSum=-2.063;VQSLOD=2.6511;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:18.06:0,18,449	1/1:3,3:7:15.01:529,15,0	0/0:26,0:18:50.38:0,50,1151	0/0:30,0:20:35.90:0,36,866	1/1:7,6:14:12.04:513,12,0	0/0:17,0:17:48.15:0,48,1227	0/0:5,0:5:12.04:0,12,290	1/1:19,7:27:42.14:1322,42,0	1/1:0,5:5:15.05:640,15,0	0/0:18,0:18:51.17:0,51,1340	0/0:15,0:15:39.13:0,39,1052	0/0:6,0:6:18.06:0,18,486	0/0:14,0:14:36.12:0,36,910	0/0:6,0:6:18.05:0,18,429	1/1:2,5:7:21.07:893,21,0	1/1:5,1:6:3.01:129,3,0	0/0:13,0:11:24.08:0,24,647	0/0:10,0:9:15.05:0,15,405	0/0:15,0:13:33.11:0,33,890	0/0:16,0:16:42.14:0,42,1113	0/0:11,0:11:24.08:0,24,642	0/0:6,0:6:8.48:0,8,242	0/0:12,0:12:30.10:0,30,809	0/0:7,0:7:15.05:0,15,405	1/1:7,7:15:24.08:1028,24,0	0/0:16,0:16:39.13:0,39,1024	0/0:14,0:13:36.12:0,36,971	1/1:0,7:7:21.07:900,21,0
chr10	95635982	.	C	CT	6165.80	PASS	AB=0.767;AC=34;AF=0.607;AN=56;BaseQRankSum=-7.112;DP=647;FS=17.233;HRun=12;HaplotypeScore=77.7408;InbreedingCoeff=0.7136;MQ=78.02;MQ0=0;MQRankSum=0.904;QD=14.24;ReadPosRankSum=-0.305;VQSLOD=3.4628;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:41.64:0,42,304	0/0:6,0:6:14.91:0,15,109	0/1:22,0:19:12.41:14,0,12	0/1:14,1:12:3.66:4,0,22	0/0:26,0:27:58.63:0,59,421	1/1:9,23:32:23.25:541,23,0	1/1:4,8:12:20.97:193,21,0	1/1:7,23:30:38.16:512,38,0	0/0:13,0:14:34.80:0,35,245	1/1:8,33:41:87.01:806,87,0	1/1:7,13:23:5.54:301,6,0	1/1:8,16:25:19.98:336,20,0	1/1:6,16:22:36.05:346,36,0	1/1:9,12:22:4.97:197,5,0	0/0:38,0:38:96.15:0,96,679	0/0:39,0:40:99:0,99,705	0/0:18,0:19:46.71:0,47,331	0/0:15,0:17:34.78:0,35,245	1/1:10,13:24:18.20:305,18,0	1/1:13,13:27:38.40:400,38,0	1/1:0,3:3:9.01:88,9,0	0/1:6,19:25:0.73:309,0,1	0/1:6,21:27:29.65:381,0,30	1/1:4,13:18:35.89:335,36,0	0/0:28,1:30:35.42:0,35,412	1/1:7,18:26:48.32:442,48,0	1/1:8,27:35:22.28:540,22,0	1/1:0,4:4:12.02:117,12,0
chr10	95637936	.	A	AGTTT	16428.44	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-14.816;DP=682;FS=0.000;HRun=0;HaplotypeScore=110.2532;InbreedingCoeff=0.9994;MQ=70.53;MQ0=3;MQRankSum=-0.730;QD=45.76;ReadPosRankSum=2.153;VQSLOD=5.2280;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:45.13:0,45,727	0/0:11,0:11:33.09:0,33,526	0/0:39,0:27:46.15:0,46,586	0/0:31,0:25:44.99:0,45,588	0/0:30,0:30:81.25:0,81,1308	1/1:5,14:19:30.10:742,30,0	1/1:7,14:21:39.13:966,39,0	0/0:32,0:32:51.07:0,51,587	0/0:29,0:29:63.20:0,63,1029	1/1:9,25:35:81.23:1862,81,0	1/1:7,19:26:54.18:1325,54,0	1/1:4,13:14:24.08:595,24,0	1/1:7,19:26:45.15:1105,45,0	1/1:8,20:29:57.20:1410,57,0	0/0:25,0:25:66.23:0,66,1107	0/0:24,0:24:57.19:0,57,951	0/0:27,0:27:57.17:0,57,928	0/0:13,0:13:33.11:0,33,544	1/1:9,12:18:27.09:659,27,0	1/1:4,16:21:51.04:1115,51,0	1/1:7,14:21:45.14:1029,45,0	1/1:4,16:21:48.16:1185,48,0	1/1:2,16:20:36.04:890,36,0	1/1:4,14:19:39.13:948,39,0	0/0:20,0:20:45.14:0,45,730	1/1:5,24:32:77.74:1779,78,0	1/1:9,18:27:33.11:817,33,0	0/0:22,0:22:47.61:0,48,624
chr10	95639281	.	AAAT	A	1336.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.115;DP=755;FS=12.561;HRun=0;HaplotypeScore=104.2651;InbreedingCoeff=0.9920;MQ=86.52;MQ0=0;MQRankSum=-4.449;QD=39.32;ReadPosRankSum=0.659;VQSLOD=4.4409;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:34:84.29:1432,84,0	0/0:15,0:15:45.15:0,45,1038	0/0:30,0:30:84.24:0,84,1726	0/0:22,0:22:63.13:0,63,1172	0/0:33,0:33:96.33:0,96,2190	0/0:25,0:25:75.26:0,75,1716	0/0:27,0:27:78.27:0,78,1799	0/0:27,0:27:81.28:0,81,1869	0/0:22,0:22:66.23:0,66,1507	0/0:31,0:31:93.32:0,93,2131	0/0:29,0:29:84.26:0,84,1849	0/0:33,0:33:99:0,99,2058	0/0:39,0:39:99:0,117,2683	0/0:28,0:28:84.27:0,84,1858	0/0:29,0:29:84.29:0,84,1934	0/0:39,0:39:99:0,114,2583	0/0:20,0:20:60.18:0,60,1337	0/0:17,0:17:51.18:0,51,1168	0/0:26,0:26:78.23:0,78,1600	0/0:38,0:38:99:0,111,2511	0/0:21,0:21:63.20:0,63,1387	0/0:28,0:28:84.25:0,84,1804	0/0:30,0:30:84.27:0,84,1891	0/0:16,0:16:45.07:0,45,974	0/0:26,0:26:75.24:0,75,1684	0/0:31,0:31:93.31:0,93,2102	0/0:33,0:33:99:0,99,2180	0/0:6,0:6:18.06:0,18,413
chr10	95641695	.	T	TA	4187.19	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-13.454;DP=695;FS=0.000;HRun=7;HaplotypeScore=64.3124;InbreedingCoeff=0.9861;MQ=75.09;MQ0=0;MQRankSum=0.767;QD=30.34;ReadPosRankSum=0.481;VQSLOD=3.8274;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,46:50:99:1631,135,0	0/0:13,0:13:33.05:0,33,319	0/0:14,0:14:33.52:0,34,319	0/0:17,0:17:29.68:0,30,287	0/0:23,0:23:63.09:0,63,603	0/0:24,0:24:63.10:0,63,608	0/0:24,0:24:66.10:0,66,637	1/1:7,27:34:78.23:931,78,0	0/0:21,0:21:60.10:0,60,579	0/0:28,0:28:72.10:0,72,691	0/0:27,0:27:69.09:0,69,661	0/0:36,0:36:99:0,99,951	0/0:24,0:24:63.09:0,63,608	0/0:20,0:20:48.07:0,48,464	0/0:30,0:30:78.10:0,78,747	0/0:30,0:30:87.14:0,87,840	1/1:6,24:30:69.21:828,69,0	1/1:1,20:21:57.17:689,57,0	0/0:20,0:20:47.87:0,48,448	0/0:30,0:30:81.12:0,81,777	0/0:23,0:23:63.09:0,63,608	0/0:19,0:19:42.06:0,42,405	0/0:21,0:21:57.09:0,57,550	0/0:30,0:30:84.11:0,84,800	0/0:20,0:19:57.09:0,57,550	0/0:29,0:29:84.11:0,84,802	0/0:34,0:33:87.13:0,87,840	1/1:0,3:3:9.03:109,9,0
chr10	95642180	.	CAAAAA	C	1054.17	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.195;DP=619;FS=5.858;HRun=7;HaplotypeScore=138.2553;InbreedingCoeff=0.9837;MQ=59.69;MQ0=18;MQRankSum=-5.199;QD=36.35;ReadPosRankSum=0.696;VQSLOD=0.4744;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:31.36:0,31,1181	0/0:11,0:11:33.11:0,33,1034	0/0:53,0:16:33.81:0,34,563	0/0:63,0:15:28.82:0,29,392	0/0:27,0:27:81.28:0,81,2475	0/0:19,0:19:54.18:0,54,1532	0/0:17,0:17:51.05:0,51,1100	0/0:25,0:25:72.12:0,72,1496	0/0:15,0:15:45.02:0,45,1339	0/0:25,0:25:72.23:0,72,2094	0/0:27,0:27:81.19:0,81,2167	0/0:14,0:13:38.92:0,39,1087	0/0:28,0:27:78.86:0,79,1529	0/0:19,0:19:51.10:0,51,1416	0/0:26,0:26:78.23:0,78,1971	0/0:20,0:20:57.18:0,57,1602	1/1:2,15:17:39.13:808,39,0	1/1:3,9:12:21:367,21,0	0/0:20,0:20:54.04:0,54,1380	0/0:25,0:25:69.14:0,69,1509	0/0:10,0:9:17.98:0,18,426	0/0:5,0:5:15.04:0,15,380	0/0:20,0:18:51.10:0,51,1351	0/0:12,0:12:36.02:0,36,890	0/0:20,0:20:60.18:0,60,1566	0/0:20,0:20:57.20:0,57,1687	0/0:34,0:34:81.26:0,81,1961	0/0:8,0:8:24.08:0,24,750
chr10	95643663	.	TGAGACATGTAG	T	9122.84	PASS	AC=38;AF=0.704;AN=54;BaseQRankSum=12.001;DP=586;FS=26.997;HRun=0;HaplotypeScore=130.4197;InbreedingCoeff=0.8570;MQ=55.72;MQ0=71;MQRankSum=-11.654;QD=25.34;ReadPosRankSum=-0.385;VQSLOD=1.9848;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,15:16:24.08:806,24,0	0/0:10,0:10:27.09:0,27,1378	0/0:33,0:18:54.19:0,54,2615	0/0:31,0:19:51.18:0,51,2410	0/0:23,0:23:63.22:0,63,3291	1/1:4,20:14:27.09:906,27,0	1/1:5,14:13:21.07:705,21,0	1/1:15,10:13:6.02:202,6,0	0/0:27,0:27:51.16:0,51,2621	1/1:3,21:11:24.05:662,24,0	1/1:3,16:12:24.08:806,24,0	1/1:5,19:12:12.04:403,12,0	1/1:3,17:10:15.05:504,15,0	1/1:7,15:15:9.03:302,9,0	0/0:33,0:33:93.32:0,93,4742	0/0:38,0:38:99:0,108,5946	1/1:6,11:12:9.03:302,9,0	1/1:3,1:2:3.01:37,3,0	1/1:3,6:7:15.05:463,15,0	1/1:4,24:17:30.10:942,30,0	1/1:5,11:12:12.04:340,12,0	1/1:3,15:7:6.02:201,6,0	1/1:2,12:4:3.01:101,3,0	1/1:1,5:4:6.02:137,6,0	0/0:28,0:28:75.26:0,75,4068	1/1:3,19:12:27.02:599,27,0	1/1:4,21:10:21.07:705,21,0	./.
chr10	95643856	.	G	GTT	3732	PASS	AB=0.703;AC=21;AF=0.375;AN=56;BaseQRankSum=4.244;DP=672;FS=0.000;HRun=11;HaplotypeScore=88.7626;InbreedingCoeff=0.7744;MQ=67.01;MQ0=4;MQRankSum=2.322;QD=13.19;ReadPosRankSum=2.285;VQSLOD=2.1602;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:23:47.10:595,47,0	1/1:0,1:8:17.98:95,18,0	0/1:23,0:18:5.59:6,0,204	0/0:14,0:13:11.86:0,12,116	1/1:9,0:27:22.11:159,22,0	0/0:26,0:21:59.68:0,60,528	0/0:14,0:15:5.93:0,6,273	1/1:7,19:27:56.57:706,57,0	0/1:4,0:27:7.77:97,0,8	0/0:29,0:28:56.94:0,57,593	0/0:36,0:36:63.78:0,64,803	0/0:27,0:25:62.21:0,62,555	0/0:21,0:23:50.69:0,51,518	0/0:23,0:20:44.73:0,45,414	0/1:7,2:29:27.72:178,0,28	1/1:6,0:40:46.20:220,46,0	1/1:3,20:25:59.47:804,59,0	1/1:4,14:18:33.11:478,33,0	0/0:21,0:23:41.47:0,41,422	0/0:29,0:31:56.85:0,57,652	0/0:11,0:13:20.61:0,21,223	0/0:22,0:22:31.85:0,32,454	0/0:19,0:21:44.71:0,45,468	0/0:19,0:18:48.03:0,48,464	1/1:5,1:28:24.33:177,24,0	0/0:24,0:19:32.92:0,33,363	0/0:32,0:24:65.80:0,66,616	1/1:1,6:7:15.05:217,15,0
chr10	95644195	.	TGGAAAGGGGTG	T	400.48	PASS	AB=0.750;AC=1;AF=0.018;AN=56;BaseQRankSum=3.639;DP=655;FS=0.000;HRun=0;HaplotypeScore=204.3865;InbreedingCoeff=-0.0182;MQ=71.93;MQ0=0;MQRankSum=-3.546;QD=16.69;ReadPosRankSum=-0.162;VQSLOD=2.1866;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.25:0,93,4887	0/0:13,0:13:39.13:0,39,2156	0/0:20,0:20:57.20:0,57,2442	0/0:20,0:20:54.18:0,54,2486	0/0:22,0:22:63.22:0,63,3532	0/0:29,0:29:87.30:0,87,4981	0/0:23,0:22:60.21:0,60,3288	0/0:28,0:28:72.25:0,72,3796	0/0:12,0:12:36.12:0,36,1967	0/0:34,0:34:96.33:0,96,5197	0/0:23,0:23:63.22:0,63,3472	0/0:22,0:21:63.22:0,63,3495	0/0:20,0:20:60.21:0,60,3174	0/1:16,8:22:99:475,0,2090	0/0:22,0:22:60.21:0,60,3291	0/0:32,0:32:96.33:0,96,5319	0/0:30,0:29:87.30:0,87,4755	0/0:19,0:17:51.18:0,51,2802	0/0:25,0:25:69.24:0,69,3706	0/0:26,0:26:75.26:0,75,4293	0/0:23,0:22:66.23:0,66,3675	0/0:16,0:16:48.16:0,48,2745	0/0:20,0:20:60.21:0,60,3263	0/0:19,0:19:54.14:0,54,2795	0/0:18,0:18:54.18:0,54,2634	0/0:26,0:26:75.26:0,75,4110	0/0:35,0:33:99:0,99,5258	0/0:21,0:21:60.21:0,60,3352
chr10	95644338	.	C	CTG	11500.65	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=4.145;DP=591;FS=3.857;HRun=0;HaplotypeScore=99.1293;InbreedingCoeff=0.9884;MQ=43.87;MQ0=23;MQRankSum=-6.541;QD=34.96;ReadPosRankSum=4.735;VQSLOD=7.2126;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:25:54.18:0,54,772	0/0:11,0:11:33.11:0,33,473	0/0:18,0:8:12.03:0,12,145	0/0:26,0:15:24.01:0,24,295	0/0:30,0:30:84.27:0,84,1185	1/1:3,9:11:27.09:485,27,0	1/1:6,23:17:42.14:769,42,0	0/0:28,0:19:54.18:0,54,773	0/0:15,0:15:45.14:0,45,625	1/1:5,26:27:72.24:1291,72,0	1/1:2,11:9:24.08:439,24,0	1/1:5,19:22:48.16:877,48,0	1/1:1,20:17:51.15:900,51,0	1/1:0,29:22:60.21:1097,60,0	0/0:17,0:17:48.16:0,48,688	0/0:26,0:26:75.24:0,75,1056	0/0:23,0:18:45.15:0,45,644	0/0:18,0:12:33.10:0,33,450	1/1:13,18:25:54.15:934,54,0	1/1:8,16:21:51.17:925,51,0	1/1:4,10:9:15.05:275,15,0	1/1:3,16:16:30.10:548,30,0	1/1:0,19:15:39.13:712,39,0	1/1:4,16:17:39.13:713,39,0	0/0:15,0:15:42.14:0,42,600	1/1:3,18:18:51.17:931,51,0	1/1:6,16:15:33.11:604,33,0	0/0:4,0:4:12.04:0,12,166
chr10	95644363	.	TA	T	9692.31	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=14.695;DP=536;FS=8.813;HRun=3;HaplotypeScore=106.2318;InbreedingCoeff=0.9553;MQ=54.14;MQ0=8;MQRankSum=-12.847;QD=24.98;ReadPosRankSum=-4.519;VQSLOD=2.4938;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:19:48.15:612,48,0	0/0:8,0:8:24.08:0,24,360	0/0:25,0:23:65.66:0,66,916	0/0:19,0:17:39.02:0,39,530	0/0:27,0:27:81.26:0,81,1187	1/1:1,13:13:36.12:463,36,0	1/1:4,24:14:33.11:423,33,0	1/1:2,17:2:3:27,3,0	0/0:13,0:13:33.11:0,33,493	1/1:2,20:18:51.16:649,51,0	1/1:0,9:5:8.92:93,9,0	1/1:3,25:26:78.24:993,78,0	1/1:2,18:16:42.14:541,42,0	1/1:1,30:24:69.22:889,69,0	0/0:15,0:15:45.15:0,45,662	0/0:27,0:27:81.26:0,81,1179	1/1:3,14:12:36.11:448,36,0	1/1:3,16:13:36.01:421,36,0	1/1:2,21:14:39.07:485,39,0	1/1:1,20:19:51.16:655,51,0	1/1:0,15:10:21.06:261,21,0	1/1:2,13:12:33.07:392,33,0	1/1:1,18:15:39.12:493,39,0	1/1:1,16:15:39.08:468,39,0	0/0:14,0:14:42.14:0,42,628	1/1:3,20:20:57.18:720,57,0	1/1:0,19:14:39.13:505,39,0	1/1:0,4:4:12.04:155,12,0
chr10	95644386	.	TA	T	9748.77	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=12.888;DP=544;FS=23.053;HRun=3;HaplotypeScore=103.2873;InbreedingCoeff=0.9951;MQ=62.46;MQ0=2;MQRankSum=-11.695;QD=24.62;ReadPosRankSum=0.075;VQSLOD=3.1827;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:26:66.21:817,66,0	0/0:8,0:8:24.08:0,24,346	0/0:17,0:17:48.16:0,48,689	0/0:17,0:17:47.94:0,48,633	0/0:24,0:24:66.20:0,66,930	1/1:2,18:19:48.15:594,48,0	1/1:1,19:10:27.08:334,27,0	1/1:2,14:7:21.07:260,21,0	0/0:16,0:16:45.13:0,45,612	1/1:0,18:14:39.12:483,39,0	1/1:2,10:8:21.06:253,21,0	1/1:0,26:24:72.23:891,72,0	1/1:0,21:17:45.14:557,45,0	1/1:1,27:21:63.20:774,63,0	0/0:20,0:20:60.20:0,60,862	0/0:35,0:35:99:0,105,1510	1/1:1,18:15:39.12:483,39,0	1/1:3,17:14:36.11:446,36,0	1/1:4,19:15:42.11:497,42,0	1/1:4,16:18:39.12:483,39,0	1/1:1,16:13:33.10:408,33,0	1/1:3,9:9:18.06:223,18,0	1/1:1,16:13:27.08:334,27,0	1/1:2,20:20:36.11:441,36,0	0/0:11,0:11:33.11:0,33,475	1/1:2,21:20:57.18:698,57,0	1/1:2,20:17:45.14:549,45,0	1/1:0,8:8:18.06:223,18,0
chr10	95644469	.	A	AC	10370.59	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-8.421;DP=646;FS=2.751;HRun=6;HaplotypeScore=69.6602;InbreedingCoeff=0.9916;MQ=78.86;MQ0=1;MQRankSum=-2.199;QD=28.26;ReadPosRankSum=1.018;VQSLOD=5.6172;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:38:99:0,105,1064	0/0:9,0:9:27.06:0,27,275	0/0:22,0:22:51.04:0,51,497	0/0:23,0:23:39.98:0,40,485	0/0:19,0:19:57.08:0,57,569	1/1:6,12:18:36.12:453,36,0	1/1:2,23:22:60.15:737,60,0	0/0:21,0:19:30.06:0,30,305	0/0:17,0:17:45.10:0,45,459	1/1:4,20:23:57.17:702,57,0	1/1:3,15:18:33.11:415,33,0	1/1:5,40:44:99:1369,111,0	1/1:3,19:21:51.16:641,51,0	1/1:2,34:33:84.18:1032,84,0	0/0:21,0:21:60.11:0,60,599	0/0:16,0:16:42.05:0,42,417	0/0:27,0:24:57.12:0,57,580	0/0:29,0:25:69.15:0,69,704	1/1:5,23:24:51.15:629,51,0	1/1:2,4:6:9.03:113,9,0	1/1:2,50:51:99:1454,117,0	1/1:1,17:18:42.13:528,42,0	1/1:0,10:10:27.09:340,27,0	1/1:2,25:27:63.18:764,63,0	0/0:18,0:17:45.08:0,45,453	1/1:2,18:20:48.15:603,48,0	1/1:1,16:17:48.14:591,48,0	0/0:16,0:16:36.08:0,36,367
chr10	95646027	.	AG	A	7821.54	PASS	AB=0.895;AC=27;AF=0.482;AN=56;BaseQRankSum=11.267;DP=696;FS=2.601;HRun=9;HaplotypeScore=113.6870;InbreedingCoeff=0.9245;MQ=77.62;MQ0=2;MQRankSum=-0.876;QD=20.97;ReadPosRankSum=4.293;VQSLOD=4.4284;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:74.87:0,75,758	0/0:8,0:8:21:0,21,209	0/0:20,0:20:39.45:0,39,407	0/0:22,0:21:32.25:0,32,380	0/0:16,0:16:19.40:0,19,296	1/1:2,20:22:57.01:520,57,0	1/1:3,19:22:48.02:439,48,0	0/0:26,1:27:23.62:0,24,483	0/0:19,0:19:8.86:0,9,345	0/0:19,0:19:42.59:0,43,475	0/0:17,0:17:27.04:0,27,292	1/1:6,33:39:87.04:795,87,0	1/1:4,22:26:63.03:574,63,0	1/1:3,34:37:99:906,100,0	0/0:36,0:35:54.07:0,54,852	0/0:38,0:38:67.65:0,68,971	0/0:33,0:33:62.84:0,63,967	0/1:15,2:17:9.80:10,0,405	1/1:3,20:23:60.03:548,60,0	1/1:5,25:30:75.04:686,75,0	1/1:7,14:21:42.94:386,43,0	1/1:1,25:26:68.87:615,69,0	1/1:2,19:20:43.32:480,43,0	1/1:4,18:22:51.49:467,51,0	0/0:27,0:27:23.45:0,23,539	1/1:6,29:35:55.03:729,55,0	1/1:5,27:32:74.41:666,74,0	0/0:9,0:9:24.06:0,24,267
chr10	95649073	.	GA	G	5447.19	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.720;DP=790;FS=1.930;HRun=3;HaplotypeScore=87.5430;InbreedingCoeff=0.9975;MQ=88.23;MQ0=0;MQRankSum=-2.655;QD=35.60;ReadPosRankSum=1.162;VQSLOD=5.3259;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,52:52:99:1908,147,0	0/0:8,0:8:24.08:0,24,359	0/0:33,1:34:96.29:0,96,1392	0/0:26,0:26:72.17:0,72,972	0/0:27,0:27:81.27:0,81,1194	0/0:23,0:23:67.11:0,67,982	0/0:27,0:27:78.26:0,78,1165	1/1:0,40:40:99:1554,120,0	0/0:32,0:32:96.33:0,96,1439	0/0:35,0:35:99:0,102,1507	0/0:11,0:11:30.09:0,30,430	0/0:31,0:31:90.30:0,90,1348	0/0:35,0:35:99:0,102,1502	0/0:36,0:36:99:0,108,1598	0/0:41,0:41:99:0,114,1706	0/0:42,0:42:99:0,126,1870	1/1:1,31:32:78.25:1011,78,0	1/1:0,21:21:57.19:740,57,0	0/0:22,0:22:66.22:0,66,987	0/0:17,0:17:51.16:0,51,744	0/0:38,0:38:99:0,110,1623	0/0:26,0:26:72.24:0,72,1078	0/0:16,0:16:45.15:0,45,673	0/0:32,0:32:96.29:0,96,1393	0/0:30,0:30:90.30:0,90,1324	0/0:22,0:22:66.22:0,66,990	0/0:26,0:26:78.25:0,78,1150	1/1:0,8:8:18.06:234,18,0
chr10	95649406	.	TAA	T	2936.78	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.077;DP=774;FS=3.623;HRun=2;HaplotypeScore=87.9236;InbreedingCoeff=0.9998;MQ=83.90;MQ0=1;MQRankSum=-3.143;QD=38.14;ReadPosRankSum=3.467;VQSLOD=3.8807;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,46:45:99:1711,105,0	0/0:11,0:11:33.11:0,33,670	0/0:27,0:27:81.22:0,81,1459	0/0:18,0:19:36.93:0,37,843	0/0:31,0:31:93.31:0,93,1832	0/0:26,0:26:78.27:0,78,1564	0/0:24,0:24:72.23:0,72,1411	0/0:43,0:43:99:0,129,2454	0/0:30,0:30:90.26:0,90,1697	0/0:39,0:39:99:0,117,2261	0/0:20,0:20:60.20:0,60,1174	0/0:41,0:41:99:0,120,2410	0/0:22,0:22:66.23:0,66,1340	0/0:23,0:23:66.21:0,66,1286	0/0:50,0:50:99:0,147,2897	0/0:39,0:39:99:0,117,2332	1/1:0,17:17:48.16:782,48,0	1/1:0,14:14:36.12:586,36,0	0/0:22,0:22:66.05:0,66,1233	0/0:26,0:26:78.23:0,78,1458	0/0:19,0:19:57.20:0,57,1134	0/0:26,0:26:78.27:0,78,1559	0/0:23,0:23:66.21:0,66,1304	0/0:32,0:32:96.30:0,96,1829	0/0:21,0:21:63.20:0,63,1203	0/0:34,0:34:99:0,102,2018	0/0:31,0:31:93.19:0,93,1692	0/0:18,0:18:48.12:0,48,933
chr10	95650865	.	ACT	A	12801.62	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=15.229;DP=662;FS=4.251;HRun=0;HaplotypeScore=85.3436;InbreedingCoeff=1.0000;MQ=83.92;MQ0=0;MQRankSum=-3.430;QD=44.45;ReadPosRankSum=4.782;VQSLOD=6.4723;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,2440	0/0:13,0:13:39.13:0,39,792	0/0:22,0:22:63.17:0,63,1155	0/0:18,0:18:43.01:0,43,929	0/0:16,0:16:45.14:0,45,876	1/1:0,15:15:39.13:634,39,0	1/1:0,32:32:87.30:1419,87,0	0/0:26,0:26:78.24:0,78,1475	0/0:20,0:20:60.21:0,60,1197	0/0:26,0:26:78.27:0,78,1556	0/0:20,0:20:57.16:0,57,1082	1/1:0,22:22:59.72:978,60,0	1/1:0,14:14:42.14:685,42,0	1/1:0,26:26:72.25:1174,72,0	0/0:35,0:35:99:0,105,2097	0/0:28,0:28:84.29:0,84,1664	0/0:35,0:35:99:0,102,2052	0/0:29,0:29:87.30:0,87,1767	1/1:0,19:19:57.18:905,57,0	1/1:0,16:16:45.15:734,45,0	1/1:0,29:29:72.16:1142,72,0	1/1:0,23:23:63.22:1027,63,0	1/1:0,18:18:50.91:829,51,0	1/1:0,35:35:93.32:1516,93,0	0/0:27,0:27:81.26:0,81,1607	1/1:0,19:19:57.19:929,57,0	1/1:0,20:20:51.17:831,51,0	0/0:16,0:16:48.16:0,48,974
chr10	95652972	.	CT	C	2699.30	PASS	AB=0.831;AC=28;AF=0.500;AN=56;BaseQRankSum=7.160;DP=578;FS=0.808;HRun=14;HaplotypeScore=65.8613;InbreedingCoeff=0.6102;MQ=64.22;MQ0=0;MQRankSum=0.891;QD=8.52;ReadPosRankSum=2.690;VQSLOD=2.9611;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:38:53.57:0,54,638	0/1:8,2:10:26.01:26,0,49	0/1:14,0:10:7.33:7,0,31	0/1:10,0:8:6.72:7,0,20	0/0:28,3:31:27.86:0,28,523	1/1:5,14:19:38.64:267,39,0	1/1:6,11:18:22.66:149,23,0	0/1:24,3:27:10.74:11,0,320	0/0:17,1:18:26.97:0,27,238	0/0:25,0:24:45.04:0,45,415	0/0:26,1:27:13.70:0,14,261	1/1:7,16:24:33.11:229,33,0	1/1:5,18:23:44.60:308,45,0	1/1:4,15:19:41.60:288,42,0	0/0:24,0:22:41.97:0,42,369	0/0:19,0:20:44.82:0,45,388	0/0:28,1:31:62.79:0,63,542	0/0:17,0:17:44.89:0,45,387	0/1:12,13:26:10.98:213,0,11	1/1:8,16:26:48.92:320,49,0	1/1:4,11:15:20.80:144,21,0	1/1:3,8:11:23.66:158,24,0	0/1:5,9:15:7.12:103,0,7	1/1:4,11:15:29.64:205,30,0	0/0:22,1:23:24.46:0,24,366	1/1:5,10:16:31.74:211,32,0	1/1:15,14:29:18.64:265,19,0	0/0:6,0:6:15.02:0,15,139
chr10	95661868	.	GCCCC	G	17295.23	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.684;DP=594;FS=10.397;HRun=13;HaplotypeScore=115.0614;InbreedingCoeff=0.9149;MQ=66.39;MQ0=2;MQRankSum=-2.676;QD=30.29;ReadPosRankSum=3.861;VQSLOD=2.8694;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,24:30:60.12:859,60,0	1/1:1,4:5:12.04:176,12,0	0/0:10,0:9:15.05:0,15,234	0/0:12,0:9:6.70:0,7,153	1/1:2,21:24:55.43:785,55,0	1/1:3,12:15:30.03:431,30,0	1/1:4,25:29:45.60:934,46,0	1/1:9,17:27:48.04:700,48,0	1/1:0,17:18:42.13:614,42,0	1/1:4,25:28:69.15:1007,69,0	1/1:4,6:10:15.02:219,15,0	1/1:5,39:44:99:1620,111,0	1/1:3,17:20:48.10:702,48,0	1/1:0,12:12:33.11:483,33,0	1/1:8,19:27:49.31:705,49,0	1/1:3,26:28:72.23:1053,72,0	1/1:4,30:34:75.20:1097,75,0	1/1:4,12:16:24.02:351,24,0	1/1:7,8:16:23.83:311,24,0	1/1:3,12:15:36.07:519,36,0	1/1:8,19:28:46.79:662,47,0	1/1:5,18:23:51.13:715,51,0	1/1:3,12:15:33.09:467,33,0	1/1:7,19:29:38.53:506,39,0	1/1:1,19:20:45.14:658,45,0	1/1:2,14:16:42.11:601,42,0	1/1:2,21:23:51.13:746,51,0	1/1:2,13:16:27.03:375,27,0
chr10	95663804	.	TAG	T	30598.78	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.927;DP=738;FS=3.671;HRun=0;HaplotypeScore=104.6298;InbreedingCoeff=0.9990;MQ=84.52;MQ0=1;MQRankSum=-10.981;QD=44.03;ReadPosRankSum=5.751;VQSLOD=6.5130;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,43:43:99:1860,114,0	1/1:0,15:15:38.85:636,39,0	0/0:24,0:24:72.25:0,72,1430	0/0:19,0:19:57.17:0,57,1119	1/1:1,14:15:36.12:587,36,0	1/1:0,18:18:51.17:832,51,0	1/1:0,24:24:63.22:1027,63,0	1/1:0,29:29:87.27:1354,87,0	1/1:0,32:32:90.31:1459,90,0	1/1:0,24:24:72.23:1145,72,0	1/1:0,13:13:27.09:441,27,0	1/1:1,42:43:99:2002,123,0	1/1:0,22:22:63.22:1025,63,0	1/1:0,35:34:93.32:1518,93,0	1/1:0,40:40:99:1664,102,0	1/1:1,39:40:99:1751,108,0	1/1:0,38:38:99:1610,99,0	1/1:0,28:28:81.28:1322,81,0	1/1:1,10:11:33.11:534,33,0	1/1:0,18:18:45.15:734,45,0	1/1:0,55:55:99:2448,151,0	1/1:0,27:27:72.25:1175,72,0	1/1:0,11:11:30.10:490,30,0	1/1:0,32:32:87.30:1419,87,0	1/1:0,20:20:48.16:783,48,0	1/1:0,25:25:75.19:1123,75,0	1/1:0,16:16:45.15:730,45,0	1/1:0,21:21:57.19:930,57,0
chr10	95666507	.	AAAT	A	321.68	PASS	AB=0.955;AC=13;AF=0.232;AN=56;BaseQRankSum=6.459;DP=310;FS=26.108;HRun=0;HaplotypeScore=57.5574;InbreedingCoeff=-0.1620;MQ=64.00;MQ0=18;MQRankSum=-3.479;QD=2.28;ReadPosRankSum=6.886;VQSLOD=-0.0729;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,2:13:5.13:77,5,0	0/0:3,0:3:5.12:0,5,20	0/0:25,0:9:18.72:0,19,144	0/0:19,0:6:6.72:0,7,35	0/0:7,0:7:3.33:0,3,68	0/1:9,0:8:1.55:2,0,66	0/1:10,3:13:16.10:113,0,16	0/0:13,0:13:29.73:0,30,319	0/0:12,0:12:21.01:0,21,205	0/0:11,0:10:8.98:0,9,182	0/0:6,0:6:14.98:0,15,148	0/1:16,1:17:12.98:13,0,84	0/0:9,1:9:3.48:0,3,20	0/0:10,0:10:2.48:0,2,71	0/0:9,0:8:18:0,18,179	0/0:9,0:9:23.37:0,23,223	0/1:16,2:18:78.72:105,0,79	0/1:14,3:16:67.43:67,0,131	0/1:8,0:7:12.40:12,0,60	0/1:3,0:3:10.62:11,0,17	0/0:11,0:11:14.92:0,15,114	0/1:8,0:8:4.35:4,0,39	0/1:5,0:4:1.26:1,0,35	0/1:15,0:13:33.45:33,0,41	0/0:10,0:10:17.49:0,17,163	0/0:10,0:10:8.14:0,8,130	0/1:15,0:15:20.15:20,0,87	0/0:4,0:2:2.99:0,3,23
chr10	95667572	.	GTA	G	801.50	PASS	AB=0.825;AC=16;AF=0.615;AN=26;BaseQRankSum=-3.203;DP=92;FS=4.497;HRun=0;HaplotypeScore=37.5211;InbreedingCoeff=0.2296;MQ=60.79;MQ0=2;MQRankSum=0.179;QD=13.58;ReadPosRankSum=-3.602;VQSLOD=1.8171;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,4:9:0.87:113,1,0	./.	0/0:8,0:3:6:0,6,53	0/0:12,0:3:6:0,6,88	./.	./.	1/1:0,1:1:3.01:32,3,0	1/1:12,0:12:18.86:283,19,0	./.	1/1:0,1:1:3:29,3,0	./.	./.	0/0:1,0:1:2.92:0,3,17	./.	./.	1/1:0,1:1:3.01:32,3,0	0/1:11,5:16:49.35:184,0,49	1/1:7,2:8:9.01:131,9,0	1/1:2,0:2:6.02:74,6,0	./.	./.	./.	./.	./.	./.	0/0:1,0:1:2.84:0,3,14	./.	0/1:7,1:7:31.51:32,0,32
chr10	95667574	.	A	ATG	2372.04	PASS	AB=0.600;AC=21;AF=0.750;AN=28;BaseQRankSum=-0.607;DP=94;FS=7.687;HRun=0;HaplotypeScore=30.2052;InbreedingCoeff=0.3755;MQ=60.82;MQ0=2;MQRankSum=0.580;QD=38.26;ReadPosRankSum=2.443;VQSLOD=4.9783;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,1:10:15.03:233,15,0	./.	0/0:9,0:3:6.02:0,6,81	0/0:12,0:3:6.02:0,6,91	./.	./.	1/1:1,0:1:3.01:57,3,0	1/1:0,12:12:36.06:576,36,0	./.	1/1:1,0:1:3.01:57,3,0	./.	./.	1/1:0,1:1:3.01:58,3,0	./.	./.	1/1:1,0:1:3.01:57,3,0	1/1:8,8:16:33.10:574,33,0	1/1:4,5:8:23.87:409,24,0	0/1:1,2:3:10.91:85,0,11	./.	0/0:0,4:4:0.47:0,0,1	./.	./.	./.	./.	1/1:0,1:1:3.01:58,3,0	./.	1/1:2,5:6:18.04:312,18,0
chr10	95667646	.	GT	G	1469.34	PASS	AC=26;AF=0.867;AN=30;BaseQRankSum=-1.204;DP=151;FS=0.000;HRun=10;HaplotypeScore=44.7951;InbreedingCoeff=0.2397;MQ=51.66;MQ0=30;MQRankSum=2.173;QD=13.60;ReadPosRankSum=2.892;VQSLOD=3.1400;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,13:18:41.87:349,42,0	./.	0/0:16,0:5:0.58:0,1,14	0/0:12,0:3:0:0,0,0	./.	1/1:2,1:1:3:26,3,0	1/1:0,1:1:3:26,3,0	1/1:6,5:11:14.99:130,15,0	./.	./.	./.	./.	./.	./.	1/1:0,1:1:3:26,3,0	1/1:2,0:1:2.97:20,3,0	1/1:7,16:19:38.97:338,39,0	1/1:6,6:11:20.88:172,21,0	1/1:5,2:2:6:52,6,0	./.	1/1:6,7:10:13.38:127,13,0	./.	./.	1/1:5,9:9:26.99:234,27,0	./.	1/1:0,1:1:3:26,3,0	./.	1/1:1,1:1:3:26,3,0
chr10	95669097	.	GAATTTTAAAACA	G	29581.03	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=5.186;DP=471;FS=2.957;HRun=0;HaplotypeScore=212.7514;InbreedingCoeff=0.7771;MQ=71.73;MQ0=0;MQRankSum=-7.937;QD=67.23;ReadPosRankSum=6.313;VQSLOD=4.3769;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:30.10:1088,30,0	1/1:0,7:7:17.98:558,18,0	0/0:15,0:15:33.11:0,33,1530	0/0:16,0:16:36.08:0,36,1433	1/1:1,24:25:54.10:1799,54,0	1/1:1,18:19:36.12:1317,36,0	1/1:2,17:19:27.09:978,27,0	1/1:1,20:21:60.16:1933,60,0	1/1:2,17:19:42.14:1529,42,0	1/1:4,17:21:45.14:1484,45,0	1/1:1,15:16:38.98:1085,39,0	1/1:5,15:20:36.12:1316,36,0	1/1:4,15:18:33.11:1193,33,0	1/1:5,12:17:42.08:1435,42,0	1/1:5,16:21:45.15:1637,45,0	1/1:0,20:20:51.18:1858,51,0	1/1:1,17:18:15.05:549,15,0	1/1:0,2:2:3.01:110,3,0	1/1:2,13:15:33.07:1037,33,0	1/1:3,22:25:39.13:1402,39,0	1/1:3,9:12:11.95:438,12,0	1/1:2,9:11:20.99:664,21,0	1/1:2,9:11:14.92:538,15,0	1/1:3,10:13:3.01:110,3,0	1/1:3,14:17:33.11:1198,33,0	1/1:1,25:26:69.12:2130,69,0	1/1:2,19:21:54.19:1976,54,0	1/1:2,5:7:6.02:220,6,0
chr10	95669293	.	AAAAAC	A	3956.77	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=3.224;DP=549;FS=40.404;HRun=0;HaplotypeScore=74.3152;InbreedingCoeff=0.3356;MQ=44.77;MQ0=64;MQRankSum=6.671;QD=8.75;ReadPosRankSum=4.500;VQSLOD=0.2979;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:18:99:142,0,134	1/1:7,0:7:10.72:101,11,0	0/0:52,0:12:12.38:0,12,225	0/0:45,0:7:14.24:0,14,133	1/1:8,19:26:25.36:169,25,0	0/1:19,0:17:6.95:127,0,7	1/1:11,0:9:12.62:100,13,0	1/1:29,0:24:16.46:217,16,0	1/1:12,0:10:11.89:111,12,0	1/1:27,0:22:36.14:311,36,0	1/1:24,0:23:23.78:170,24,0	1/1:18,0:14:29.46:218,29,0	1/1:16,0:15:18.64:173,19,0	1/1:10,0:9:7.21:71,7,0	1/1:7,0:7:17.91:137,18,0	1/1:18,0:17:25.49:204,25,0	0/1:19,0:16:34.24:34,0,193	0/1:21,0:18:98.54:99,0,213	1/1:14,0:10:10.23:125,10,0	1/1:25,0:23:41.61:344,42,0	1/1:12,0:11:9.67:80,10,0	1/1:14,0:13:18.09:138,18,0	1/1:13,0:11:8:57,8,0	1/1:14,0:12:14.03:110,14,0	1/1:13,0:12:22.58:201,23,0	1/1:28,0:23:50.01:390,50,0	1/1:17,0:14:13.80:123,14,0	1/1:17,0:5:1.06:5,1,0
chr10	95669294	.	AAAAC	A	4256.71	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=-4.108;DP=526;FS=32.561;HRun=0;HaplotypeScore=63.1704;InbreedingCoeff=0.3813;MQ=45.41;MQ0=61;MQRankSum=3.476;QD=9.88;ReadPosRankSum=1.083;VQSLOD=2.0247;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:18:59.03:146,0,59	1/1:7,0:7:11.77:102,12,0	0/0:52,0:13:18.31:0,18,240	0/0:43,0:7:7.61:0,8,92	1/1:25,0:24:25.03:166,25,0	0/1:19,0:17:0.04:125,0,0	1/1:10,0:8:14.87:118,15,0	1/1:32,0:27:41.99:315,42,0	1/1:13,0:11:17.35:139,17,0	1/1:26,0:21:38.24:314,38,0	1/1:24,0:23:24.60:171,25,0	1/1:14,0:11:28.55:207,29,0	1/1:14,0:13:20.34:163,20,0	1/1:7,0:7:8.69:72,9,0	1/1:8,0:8:20.90:163,21,0	1/1:14,0:13:26.62:205,27,0	0/1:19,0:16:38.12:38,0,109	0/1:20,0:18:99:100,0,120	1/1:16,0:12:17.48:180,17,0	1/1:23,0:21:43.69:357,44,0	1/1:12,0:11:10.48:82,10,0	1/1:14,0:13:22.85:167,23,0	1/1:4,9:11:8.49:75,8,0	1/1:13,0:11:14.35:111,14,0	1/1:13,0:12:23.36:202,23,0	1/1:26,0:21:53.48:411,53,0	1/1:17,0:14:16.63:126,17,0	1/1:13,0:3:0.89:2,1,0
chr10	95669297	.	AC	A	5188.71	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=0.269;DP=493;FS=20.021;HRun=1;HaplotypeScore=43.6938;InbreedingCoeff=0.9147;MQ=49.83;MQ0=43;MQRankSum=-2.776;QD=12.88;ReadPosRankSum=3.519;VQSLOD=1.9064;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:19:40.32:251,40,0	1/1:6,0:6:12.47:103,12,0	0/0:48,0:15:24.45:0,24,301	0/0:39,1:8:16.75:0,17,163	1/1:21,0:21:23.78:163,24,0	1/1:14,0:12:25.10:178,25,0	1/1:10,0:9:20.92:167,21,0	1/1:16,17:28:30.04:328,30,0	1/1:14,0:12:22.34:169,22,0	1/1:7,20:23:46.28:366,46,0	1/1:2,21:22:29.27:184,29,0	1/1:14,0:11:29.13:209,29,0	1/1:12,0:12:21.80:156,22,0	1/1:7,0:7:15.44:125,15,0	1/1:9,0:9:26.90:212,27,0	1/1:15,0:14:36.75:274,37,0	1/1:18,0:16:30.14:183,30,0	1/1:19,0:18:38.46:254,38,0	1/1:17,0:14:25.64:233,26,0	1/1:23,0:21:52.01:390,52,0	1/1:12,0:11:11.77:82,12,0	1/1:13,0:13:28.05:198,28,0	1/1:12,0:10:9.25:52,9,0	1/1:14,0:12:17.78:134,18,0	1/1:12,0:11:24.91:205,25,0	1/1:22,0:18:53.61:412,54,0	1/1:16,0:13:24:162,24,0	./.
chr10	95669678	.	G	GC	28199	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.673;DP=735;FS=3.621;HRun=1;HaplotypeScore=90.1643;InbreedingCoeff=0.9918;MQ=85.89;MQ0=0;MQRankSum=-10.948;QD=41.05;ReadPosRankSum=6.713;VQSLOD=4.6499;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,40:41:99:1618,108,0	1/1:0,15:15:42.14:629,42,0	0/0:25,0:25:54.27:0,54,850	0/0:23,0:23:60.12:0,60,747	1/1:0,25:25:69.23:1024,69,0	1/1:0,28:28:69.23:1034,69,0	1/1:1,26:27:72.24:1079,72,0	1/1:3,34:37:99:1487,102,0	1/1:0,18:18:54.18:809,54,0	1/1:0,28:28:84.28:1257,84,0	1/1:0,14:14:36.12:539,36,0	1/1:0,33:33:87.29:1303,87,0	1/1:0,21:21:57.19:853,57,0	1/1:1,30:31:84.28:1259,84,0	1/1:0,29:29:84.28:1258,84,0	1/1:0,29:29:78.26:1169,78,0	1/1:0,34:34:93.31:1387,93,0	1/1:1,27:28:72.24:1079,72,0	1/1:1,24:25:72.24:1071,72,0	1/1:0,27:27:78.26:1162,78,0	1/1:0,34:34:99:1528,102,0	1/1:0,23:23:69.23:1029,69,0	1/1:1,19:20:54.18:809,54,0	1/1:1,27:28:81.27:1214,81,0	1/1:1,23:25:63.21:932,63,0	1/1:1,24:25:75.19:1094,75,0	1/1:2,34:35:90.30:1349,90,0	1/1:0,6:6:15.05:225,15,0
chr10	95670590	.	AT	A	4072.79	PASS	AC=26;AF=0.481;AN=54;BaseQRankSum=12.869;DP=452;FS=5.559;HRun=10;HaplotypeScore=49.5903;InbreedingCoeff=0.9587;MQ=63.35;MQ0=0;MQRankSum=0.193;QD=19.96;ReadPosRankSum=3.104;VQSLOD=4.6149;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.20:0,96,1038	0/0:6,0:6:18.05:0,18,199	0/0:8,0:4:8.39:0,8,71	./.	0/0:21,0:21:48.12:0,48,521	1/1:4,12:16:32.99:286,33,0	1/1:2,18:20:50.98:443,51,0	0/0:37,0:37:78.18:0,78,840	0/0:18,0:18:48.11:0,48,515	0/0:14,0:14:36.10:0,36,398	0/0:11,0:11:27.01:0,27,271	1/1:0,17:17:41.99:365,42,0	1/1:5,13:18:23.82:320,24,0	1/1:2,9:11:18:156,18,0	0/0:16,0:16:45.10:0,45,482	0/0:15,0:15:42.08:0,42,447	0/0:16,1:17:16.07:0,16,405	0/0:21,0:21:54.05:0,54,553	1/1:4,22:26:65.95:569,66,0	1/1:3,6:9:17.92:147,18,0	1/1:0,9:9:26.99:234,27,0	1/1:1,10:11:29.95:253,30,0	1/1:5,7:12:17.99:156,18,0	1/1:4,14:18:38.99:339,39,0	0/0:15,0:15:30.08:0,30,332	1/1:2,17:19:50.97:439,51,0	1/1:3,15:18:41.99:365,42,0	0/0:6,0:6:3.01:0,3,33
chr10	95670939	.	TCACCACCACCACCAC	T	1408.92	PASS	AC=16;AF=0.400;AN=40;BaseQRankSum=-1.654;DP=268;FS=11.086;HRun=0;HaplotypeScore=114.0513;InbreedingCoeff=0.5376;MQ=96.54;MQ0=6;MQRankSum=-1.759;QD=14.99;ReadPosRankSum=0.577;VQSLOD=1.5167;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:13:8.99:0,9,279	./.	./.	./.	0/0:6,0:9:8.74:0,9,55	0/0:7,0:7:9.01:0,9,108	0/0:13,0:13:6.02:0,6,76	./.	0/0:8,0:8:3.01:0,3,92	0/0:3,0:3:6.02:0,6,147	0/0:4,0:5:5.81:0,6,48	1/1:9,2:11:3.01:123,3,0	1/1:14,2:16:3.01:123,3,0	1/1:5,5:10:9.03:370,9,0	0/0:5,0:7:2.88:0,3,15	0/0:13,0:19:20.26:0,20,140	./.	0/0:7,0:6:3.01:0,3,129	1/1:1,2:3:6:147,6,0	./.	1/1:19,0:19:12.04:328,12,0	./.	./.	1/1:11,5:15:3.01:123,3,0	0/0:3,0:4:2.88:0,3,15	1/1:8,4:12:3.48:124,3,0	1/1:5,2:7:6.02:206,6,0	0/0:2,0:2:3.01:0,3,63
chr10	95671047	.	TA	T	701.30	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.851;DP=395;FS=3.473;HRun=1;HaplotypeScore=39.8482;InbreedingCoeff=0.9784;MQ=92.98;MQ0=0;MQRankSum=-3.385;QD=36.91;ReadPosRankSum=1.709;VQSLOD=3.6165;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:57.19:796,57,0	0/0:7,0:7:18.06:0,18,288	0/0:22,0:22:63.20:0,63,969	0/0:12,0:12:36.11:0,36,528	0/0:9,0:9:27.07:0,27,405	0/0:18,0:18:54.18:0,54,863	0/0:15,0:15:45.15:0,45,704	0/0:13,0:13:39.12:0,39,601	0/0:14,0:14:42.13:0,42,637	0/0:11,0:11:33.10:0,33,506	0/0:7,0:7:21.07:0,21,336	0/0:24,0:24:72.23:0,72,1124	0/0:12,0:12:36.12:0,36,565	0/0:9,0:9:24.08:0,24,384	0/0:8,0:8:24.08:0,24,384	0/0:13,0:13:39.12:0,39,600	0/0:34,0:34:99:0,99,1547	0/0:17,0:17:51.17:0,51,801	0/0:16,0:16:48.15:0,48,723	0/0:11,0:11:33.11:0,33,515	0/0:18,0:18:51.16:0,51,791	0/0:11,0:11:33.11:0,33,527	0/0:10,0:10:30.10:0,30,456	0/0:22,0:22:60.12:0,60,893	0/0:14,0:14:42.14:0,42,660	0/0:9,0:9:24.07:0,24,361	0/0:11,0:11:33.11:0,33,527	0/0:9,0:9:27.07:0,27,385
chr10	95673025	.	TACCGCC	T	91.49	PASS	AB=1.000;AC=4;AF=0.095;AN=42;BaseQRankSum=-1.323;DP=235;FS=1.219;HRun=0;HaplotypeScore=56.5045;InbreedingCoeff=0.2177;MQ=86.72;MQ0=0;MQRankSum=-2.259;QD=2.18;ReadPosRankSum=-0.733;VQSLOD=1.5146;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,4:10:8.96:126,9,0	./.	0/0:11,0:11:21.02:0,21,223	0/0:11,0:10:8.20:0,8,160	0/0:3,0:3:3.01:0,3,64	0/0:11,0:11:12:0,12,137	0/0:19,0:19:15.01:0,15,208	0/0:12,0:12:16.63:0,17,163	0/0:7,0:7:8.98:0,9,72	./.	./.	0/0:7,0:7:9:0,9,175	0/0:12,0:11:12:0,12,114	0/0:9,0:9:15.01:0,15,241	0/0:6,0:6:12:0,12,117	0/0:7,0:7:15.01:0,15,294	0/1:18,0:18:23.19:23,0,345	0/1:14,0:14:45.07:45,0,259	0/0:11,0:11:15.04:0,15,248	./.	0/0:16,0:16:9.68:0,10,192	./.	./.	0/0:21,0:21:45.03:0,45,905	0/0:2,0:2:3.01:0,3,83	0/0:11,0:11:26.99:0,27,528	0/0:8,0:8:6.02:0,6,152	./.
chr10	95673338	.	C	CG	3143.25	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-5.664;DP=343;FS=2.703;HRun=8;HaplotypeScore=64.2025;InbreedingCoeff=0.6062;MQ=87.50;MQ0=4;MQRankSum=-2.737;QD=12.88;ReadPosRankSum=2.489;VQSLOD=3.2654;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:59.88:0,60,367	1/1:2,0:2:2.98:22,3,0	0/0:44,1:21:20.20:0,20,150	0/1:37,0:24:5.25:5,0,148	1/1:1,9:11:23.98:254,24,0	1/1:3,9:12:21.06:239,21,0	1/1:1,9:11:24.05:263,24,0	1/1:10,0:10:1.06:41,1,0	1/1:0,10:10:6.01:63,6,0	1/1:3,3:6:9.03:102,9,0	1/1:2,5:7:14.93:143,15,0	1/1:5,13:18:10.61:159,11,0	1/1:1,7:8:6.02:68,6,0	1/1:3,5:8:2.76:63,3,0	1/1:2,17:19:30.07:342,30,0	1/1:0,9:9:14.88:172,15,0	0/0:13,0:13:34.20:0,34,207	0/0:17,0:17:49.21:0,49,287	1/1:3,5:9:20.92:194,21,0	1/1:2,3:5:9.02:100,9,0	1/1:4,5:9:12.03:137,12,0	1/1:2,0:2:3.01:35,3,0	1/1:0,5:5:6.02:68,6,0	1/1:5,8:13:32.95:335,33,0	1/1:3,7:10:7.28:130,7,0	1/1:4,7:12:24.46:234,24,0	1/1:1,6:7:9.03:102,9,0	1/1:3,0:3:5.87:35,6,0
chr10	95673354	.	G	GA	329.43	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.092;DP=368;FS=2.105;HRun=0;HaplotypeScore=72.5529;InbreedingCoeff=0.8474;MQ=84.12;MQ0=4;MQRankSum=-0.753;QD=20.59;ReadPosRankSum=-0.042;VQSLOD=5.1949;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:21.96:0,22,164	0/0:3,0:3:9.03:0,9,124	0/0:40,0:17:38.41:0,38,379	0/0:35,0:19:34.47:0,34,300	0/0:11,0:11:29.96:0,30,330	0/0:16,0:16:42.11:0,42,525	0/0:15,0:15:41.90:0,42,498	1/1:2,9:11:29.44:353,29,0	0/0:11,0:11:15:0,15,168	0/0:6,0:6:18.04:0,18,227	0/0:10,0:10:21.52:0,22,254	0/0:19,0:19:35.78:0,36,441	0/0:13,0:13:21.52:0,22,261	0/0:9,0:9:21.07:0,21,281	0/0:18,0:18:36.10:0,36,446	0/0:11,0:11:23.79:0,24,303	0/0:13,0:13:11.80:0,12,54	0/0:15,0:15:24.63:0,25,87	0/0:12,0:12:29.78:0,30,339	0/0:6,0:6:11.41:0,11,172	0/0:7,0:7:18.03:0,18,195	0/0:6,0:6:17.93:0,18,185	0/0:9,0:9:20.98:0,21,229	0/0:12,0:12:33.06:0,33,391	0/0:9,0:9:21.03:0,21,260	0/0:11,0:11:27.04:0,27,331	0/0:9,0:9:18.04:0,18,213	1/1:0,5:5:6.02:88,6,0
chr10	95675258	.	G	GC	12136.19	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-14.676;DP=690;FS=1.699;HRun=6;HaplotypeScore=62.5821;InbreedingCoeff=0.9975;MQ=69.05;MQ0=0;MQRankSum=-1.925;QD=30.04;ReadPosRankSum=0.160;VQSLOD=5.4136;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:93.20:0,93,945	0/0:11,0:11:27.06:0,27,275	0/0:19,0:18:40.89:0,41,397	0/0:23,0:22:16.87:0,17,408	0/0:20,0:20:51.06:0,51,504	1/1:2,26:28:78.25:980,78,0	1/1:4,18:22:39.12:491,39,0	1/1:9,22:31:69.05:830,69,0	0/0:30,0:30:84.19:0,84,856	1/1:3,25:28:78.23:955,78,0	1/1:1,11:12:27.09:338,27,0	1/1:1,28:29:63.20:793,63,0	1/1:2,25:27:66.21:829,66,0	1/1:0,25:25:72.23:906,72,0	0/0:36,0:36:99:0,102,1040	0/0:38,0:38:99:0,111,1131	0/0:26,0:26:75.09:0,75,744	0/0:26,0:26:78.14:0,78,784	1/1:3,11:14:33.11:415,33,0	1/1:0,21:21:48.15:591,48,0	1/1:7,35:42:99:1280,102,0	1/1:1,17:19:45.14:565,45,0	1/1:1,13:15:36.11:443,36,0	1/1:3,28:31:72.23:902,72,0	0/0:20,0:20:57.12:0,57,575	1/1:2,23:26:66.18:801,66,0	1/1:1,25:26:60.19:755,60,0	1/1:1,7:8:21.07:264,21,0
chr10	95675689	.	GGTTT	G	9775.82	PASS	AB=0.882;AC=49;AF=0.875;AN=56;BaseQRankSum=5.089;DP=496;FS=14.256;HRun=0;HaplotypeScore=94.0672;InbreedingCoeff=0.6717;MQ=69.84;MQ0=3;MQRankSum=3.187;QD=23.06;ReadPosRankSum=3.110;VQSLOD=3.8575;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:27:12.43:0,12,1315	1/1:3,1:4:3.01:48,3,0	0/0:18,0:11:3.01:0,3,41	0/0:27,0:20:21:0,21,406	1/1:9,14:22:39.09:593,39,0	1/1:4,12:16:24.08:382,24,0	1/1:7,8:15:18.06:287,18,0	0/1:26,0:30:52.29:66,0,52	1/1:8,11:19:30.10:478,30,0	1/1:1,9:10:27.09:430,27,0	1/1:5,14:19:36.12:573,36,0	1/1:11,10:21:21.07:334,21,0	1/1:5,11:16:30.10:478,30,0	1/1:10,10:20:30.10:478,30,0	1/1:4,11:15:33.11:523,33,0	1/1:5,13:18:36.12:573,36,0	1/1:14,12:26:24.67:426,25,0	1/1:5,18:23:42.14:661,42,0	1/1:10,12:21:36.07:523,36,0	1/1:7,13:20:33.11:525,33,0	1/1:4,15:19:42.14:669,42,0	1/1:3,7:10:15.05:239,15,0	1/1:4,11:13:8.60:143,9,0	1/1:1,6:7:15.05:239,15,0	1/1:2,11:13:33.11:522,33,0	1/1:14,4:18:12.04:191,12,0	1/1:6,9:15:18.06:287,18,0	1/1:6,0:10:12.01:112,12,0
chr10	95676828	.	A	ATGTGTGTGTGTGTGTGTGTGTG	14840.88	PASS	AB=0.878;AC=48;AF=0.889;AN=54;BaseQRankSum=-2.559;DP=701;FS=5.755;HRun=0;HaplotypeScore=383.2155;InbreedingCoeff=0.3644;MQ=49.80;MQ0=6;MQRankSum=-3.907;QD=23.71;ReadPosRankSum=2.728;VQSLOD=2.0029;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:34:11.13:450,11,0	1/1:10,3:13:5.01:389,5,0	0/0:35,0:24:4.38:0,4,676	0/0:23,0:19:15.03:0,15,330	./.	1/1:17,0:16:6:115,6,0	1/1:28,0:28:14.68:347,15,0	1/1:41,0:37:38.28:1260,38,0	0/1:24,0:36:20.54:1365,0,21	1/1:32,0:31:27.09:1168,27,0	1/1:8,0:8:5.99:48,6,0	1/1:30,0:29:15.03:563,15,0	1/1:28,0:31:9.03:588,9,0	1/1:27,0:27:9.50:333,10,0	1/1:33,9:44:9.03:690,9,0	1/1:28,3:31:3.01:253,3,0	1/1:23,0:23:15.05:666,15,0	1/1:16,0:16:24.44:1323,24,0	1/1:25,0:23:30.09:1233,30,0	1/1:15,0:14:3.01:93,3,0	1/1:19,0:19:3.48:48,3,0	1/1:17,0:17:2.99:24,3,0	1/1:14,0:14:3.01:113,3,0	1/1:25,0:25:7.41:126,7,0	0/1:22,0:20:0:0,0,0	1/1:29,0:27:33.10:1870,33,0	1/1:22,0:21:9.92:703,10,0	1/1:19,0:22:21.07:1077,21,0
chr10	95677761	.	CT	C	14589.03	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=11.586;DP=745;FS=11.369;HRun=1;HaplotypeScore=78.2385;InbreedingCoeff=0.9999;MQ=78.10;MQ0=0;MQRankSum=-3.783;QD=38.80;ReadPosRankSum=5.709;VQSLOD=4.4844;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1931	0/0:16,0:16:48.16:0,48,767	0/0:30,1:31:87.22:0,87,1228	0/0:24,0:25:70.55:0,71,923	0/0:34,0:34:99:0,99,1553	1/1:0,22:22:60.20:839,60,0	1/1:0,28:28:72.24:1007,72,0	0/0:46,0:46:99:0,132,2052	0/0:23,0:23:69.24:0,69,1103	1/1:0,32:32:96.32:1331,96,0	1/1:0,11:11:30.10:414,30,0	1/1:0,26:26:69.23:964,69,0	1/1:0,20:20:54.18:755,54,0	1/1:0,27:27:69.23:963,69,0	0/0:29,0:29:87.30:0,87,1389	0/0:39,0:39:99:0,117,1833	0/0:22,0:22:66.20:0,66,1029	0/0:22,0:22:66.20:0,66,1030	1/1:0,34:34:99:1315,99,0	1/1:0,27:27:81.27:1123,81,0	1/1:0,31:31:81.27:1133,81,0	1/1:0,25:25:69.23:954,69,0	1/1:0,22:22:60.03:835,60,0	1/1:0,35:35:99:1467,105,0	0/0:25,0:25:75.26:0,75,1199	1/1:0,24:24:72.22:985,72,0	1/1:0,12:12:36.12:502,36,0	0/0:16,0:16:48.16:0,48,767
chr10	95678783	.	G	GA	1680.59	PASS	AB=0.748;AC=6;AF=0.107;AN=56;BaseQRankSum=-6.313;DP=659;FS=4.943;HRun=11;HaplotypeScore=67.4112;InbreedingCoeff=0.6519;MQ=60.96;MQ0=5;MQRankSum=1.638;QD=12.18;ReadPosRankSum=3.998;VQSLOD=3.5706;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,33:43:80.46:747,80,0	0/0:10,0:10:20.90:0,21,162	0/0:20,0:12:13.54:0,14,164	0/0:5,0:5:8.88:0,9,62	0/0:43,2:46:40.99:0,41,664	0/0:17,0:17:19.42:0,19,323	0/0:25,0:24:59.61:0,60,464	0/0:29,0:29:71.09:0,71,521	0/0:19,0:20:52.19:0,52,382	0/0:15,0:15:41.82:0,42,320	0/0:25,0:25:58.76:0,59,441	0/0:20,0:20:42.42:0,42,312	0/0:22,0:22:44.81:0,45,348	0/0:16,0:16:44.34:0,44,345	0/0:26,0:26:72.61:0,73,559	0/0:28,0:27:59.71:0,60,462	0/1:12,32:45:8.82:620,0,9	1/1:5,21:26:44.92:441,45,0	0/0:28,0:27:51.74:0,52,422	0/0:23,0:23:29.43:0,29,410	0/0:20,0:20:35.38:0,35,268	0/0:18,0:18:41.81:0,42,324	0/0:18,0:18:41.82:0,42,325	0/1:21,2:22:7.09:7,0,317	0/0:16,0:16:26.87:0,27,209	0/0:32,0:32:80.58:0,81,616	0/0:25,0:25:43.10:0,43,444	0/0:16,0:16:37.88:0,38,284
chr10	95679802	.	TAC	T	19461.33	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.910;DP=681;FS=3.852;HRun=0;HaplotypeScore=88.0953;InbreedingCoeff=0.9838;MQ=75.08;MQ0=3;MQRankSum=-9.027;QD=30.94;ReadPosRankSum=6.748;VQSLOD=6.6133;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:35:87.28:1119,87,0	1/1:2,10:12:27.09:348,27,0	0/0:26,0:25:60.20:0,60,972	0/0:26,0:24:59.94:0,60,947	1/1:3,25:28:69.22:888,69,0	1/1:2,27:29:63.20:811,63,0	1/1:3,22:25:60.19:772,60,0	1/1:4,28:32:84.26:1067,84,0	1/1:5,22:27:57.18:734,57,0	1/1:2,26:28:81.26:1039,81,0	1/1:2,19:21:48.16:618,48,0	1/1:1,35:36:87.28:1119,87,0	1/1:3,23:26:60.19:772,60,0	1/1:2,24:26:69.22:883,69,0	1/1:3,27:30:75.24:965,75,0	1/1:5,21:25:57.18:734,57,0	1/1:4,14:18:39.13:502,39,0	1/1:0,20:19:48.16:618,48,0	1/1:1,17:18:51.17:656,51,0	1/1:4,19:23:51.17:656,51,0	1/1:3,27:31:80.88:992,81,0	1/1:3,19:22:48.16:617,48,0	1/1:2,15:17:42.14:541,42,0	1/1:3,24:27:54.17:695,54,0	1/1:2,21:23:60.20:772,60,0	1/1:5,21:26:63.20:810,63,0	1/1:2,15:17:45.15:579,45,0	1/1:1,5:6:12.04:154,12,0
chr10	95682604	.	GA	G	2147.02	PASS	AB=0.883;AC=18;AF=0.321;AN=56;BaseQRankSum=8.413;DP=545;FS=2.319;HRun=13;HaplotypeScore=59.1261;InbreedingCoeff=0.5446;MQ=66.50;MQ0=8;MQRankSum=0.765;QD=8.69;ReadPosRankSum=2.981;VQSLOD=2.8328;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,32:39:94.47:684,94,0	1/1:2,9:11:1.10:130,1,0	0/1:18,0:10:2.27:2,0,46	0/1:13,0:10:5.44:5,0,40	1/1:3,23:27:60.47:435,60,0	0/0:17,2:18:17.09:0,17,315	0/1:17,1:19:1.30:1,0,311	0/0:20,1:21:26.07:0,26,391	1/1:1,17:18:38.78:284,39,0	0/1:16,3:19:4.83:5,0,268	0/0:16,0:14:23.93:0,24,219	0/0:17,1:19:17:0,17,313	0/0:11,0:11:30.03:0,30,285	0/0:12,2:14:5.07:0,5,197	1/1:3,16:19:9.49:225,9,0	0/1:4,11:15:5.32:129,0,5	0/0:14,0:14:33.04:0,33,316	0/0:28,1:30:50.18:0,50,639	0/0:18,1:18:36.91:0,37,343	0/0:21,1:22:8.13:0,8,236	0/1:17,2:19:4.91:5,0,267	0/0:15,0:15:21.03:0,21,204	0/0:18,0:16:24.89:0,25,222	0/0:31,0:31:84.11:0,84,806	1/1:5,23:27:56.62:416,57,0	0/0:21,0:21:42.05:0,42,399	0/0:22,1:23:34.66:0,35,478	0/0:4,0:3:8.97:0,9,78
chr10	95685358	.	A	AT	232.45	PASS	AB=0.593;AC=1;AF=0.019;AN=54;BaseQRankSum=-0.779;DP=434;FS=5.888;HRun=1;HaplotypeScore=54.9981;InbreedingCoeff=0.2270;MQ=43.36;MQ0=37;MQRankSum=-3.752;QD=14.53;ReadPosRankSum=-0.335;VQSLOD=2.6915;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:5,11:13:2.95:306,0,3	0/0:9,0:9:15.01:0,15,188	./.	0/0:3,0:1:3.01:0,3,42	0/0:34,0:31:60.06:0,60,798	0/0:21,0:19:30.10:0,30,419	0/0:15,0:8:21.03:0,21,271	0/0:38,0:28:81.16:0,81,1062	0/0:13,1:13:18.03:0,18,230	0/0:20,0:19:54.14:0,54,725	0/0:16,0:15:33.01:0,33,398	0/0:15,0:14:18.06:0,18,251	0/0:3,0:3:6.02:0,6,84	0/0:13,0:11:15.05:0,15,207	0/0:14,0:13:15.04:0,15,194	0/0:13,0:12:30.06:0,30,379	0/0:20,0:13:21.06:0,21,277	0/0:16,0:12:21.04:0,21,273	0/0:17,0:14:42.14:0,42,586	0/0:19,0:17:39.13:0,39,542	0/0:13,0:9:15.01:0,15,188	0/0:4,0:4:8.99:0,9,104	0/0:7,0:6:12.04:0,12,168	0/0:4,0:2:3.01:0,3,42	0/0:25,0:24:45.04:0,45,562	0/0:21,0:20:51.13:0,51,688	0/0:22,0:21:41.99:0,42,585	0/0:19,0:18:30.07:0,30,399
chr10	95685376	.	T	TA	2252.80	PASS	AB=0.821;AC=43;AF=0.768;AN=56;BaseQRankSum=1.184;DP=486;FS=4.057;HRun=16;HaplotypeScore=64.6414;InbreedingCoeff=0.0852;MQ=47.51;MQ0=27;MQRankSum=-0.340;QD=5.00;ReadPosRankSum=-2.724;VQSLOD=1.3469;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,1:20:15.73:85,16,0	0/1:4,4:8:7.79:38,0,8	0/0:6,0:1:2.90:0,3,16	0/0:6,0:2:2.71:0,3,16	1/1:23,19:39:10.38:317,10,0	0/1:12,8:19:23.53:102,0,24	0/1:9,1:7:14.54:16,0,15	0/1:25,1:23:7.75:8,0,93	0/1:9,2:13:15.72:65,0,16	1/1:12,10:23:24.86:166,25,0	1/1:9,4:15:6.69:114,7,0	1/1:9,8:17:7.23:51,7,0	1/1:3,6:9:5.94:43,6,0	1/1:9,6:14:1.73:95,2,0	1/1:8,6:15:6.87:50,7,0	1/1:6,10:16:1.05:93,1,0	1/1:10,0:17:0.53:55,1,0	1/1:4,3:19:23.03:132,23,0	1/1:12,2:13:14.60:93,15,0	1/1:12,5:15:6.46:49,6,0	1/1:7,5:14:7.40:130,7,0	0/1:5,1:6:21.58:30,0,22	1/1:1,7:8:8.97:71,9,0	1/1:2,3:5:11.82:86,12,0	1/1:11,14:26:24.13:211,24,0	1/1:21,5:24:16.44:202,16,0	0/1:25,3:26:75.76:103,0,76	0/0:22,0:22:22.38:0,22,134
chr10	95686084	.	AGGGCCCAGCCCATTGTGGGTGGTACCACACCCT	A	21184.92	PASS	AB=1.000;AC=33;AF=0.611;AN=54;BaseQRankSum=13.722;DP=470;FS=26.147;HRun=0;HaplotypeScore=409.3932;InbreedingCoeff=0.8352;MQ=56.96;MQ0=2;MQRankSum=-12.458;QD=97.63;ReadPosRankSum=4.385;VQSLOD=3.0739;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,11500	0/0:9,0:9:24.08:0,24,2798	0/0:15,0:15:6.10:0,6,860	0/1:13,0:10:5.74:6,0,522	0/0:15,0:15:39.13:0,39,4824	1/1:5,6:11:18.06:1552,18,0	1/1:12,4:14:12.04:1034,12,0	./.	0/0:27,0:27:75.26:0,75,10339	1/1:10,5:15:15.03:1057,15,0	1/1:6,5:11:15.05:1279,15,0	1/1:9,10:19:30.10:2586,30,0	1/1:6,13:19:39.13:3362,39,0	1/1:5,5:10:15.05:1206,15,0	0/0:29,0:29:84.29:0,84,10435	0/0:25,0:25:72.25:0,72,9756	0/0:43,0:43:99:0,126,16001	0/0:26,0:26:72.25:0,72,8851	1/1:7,2:8:5.99:280,6,0	1/1:3,5:8:15.05:1293,15,0	1/1:7,4:10:9.03:705,9,0	1/1:5,5:10:12.04:1034,12,0	1/1:3,5:8:15.05:1293,15,0	1/1:6,11:17:15.05:1137,15,0	0/0:14,0:14:39.13:0,39,4464	1/1:10,3:13:6.02:517,6,0	1/1:9,13:22:29.89:2585,30,0	1/1:3,0:3:3.01:259,3,0
chr10	95686290	.	CAAAT	C	5202.42	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.792;DP=770;FS=5.007;HRun=0;HaplotypeScore=123.4510;InbreedingCoeff=1.0000;MQ=68.81;MQ0=6;MQRankSum=0.008;QD=46.87;ReadPosRankSum=2.260;VQSLOD=5.2989;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,47:47:99:2127,114,0	0/0:16,0:16:45.14:0,45,1126	0/0:29,0:21:57.67:0,58,1399	0/0:18,0:19:44.72:0,45,1037	0/0:25,0:25:63.22:0,63,1681	0/0:21,0:21:60.21:0,60,1598	0/0:26,0:26:69.24:0,69,1752	0/0:33,0:33:99:0,99,2513	0/0:41,0:41:99:0,120,3156	0/0:25,0:25:66.23:0,66,1760	0/0:16,0:16:48.16:0,48,1281	0/0:32,0:32:84.29:0,84,2215	0/0:19,0:19:54.16:0,54,1332	0/0:21,0:21:60.21:0,60,1556	0/0:36,0:36:99:0,108,2869	0/0:31,0:31:90.30:0,90,2330	1/1:2,35:36:90.31:1679,90,0	1/1:1,25:26:75.26:1396,75,0	0/0:32,0:31:90.31:0,90,2397	0/0:34,0:34:99:0,99,2623	0/0:49,0:49:99:0,141,3643	0/0:23,0:23:69.24:0,69,1840	0/0:18,0:18:48.16:0,48,1217	0/0:30,0:30:90.31:0,90,2399	0/0:21,0:21:63.22:0,63,1678	0/0:30,0:30:90.30:0,90,2294	0/0:14,0:14:42.13:0,42,1034	0/0:15,0:15:45.15:0,45,1194
chr10	95687943	.	A	AT	3945.03	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-13.034;DP=619;FS=16.291;HRun=8;HaplotypeScore=56.0789;InbreedingCoeff=0.9871;MQ=71.63;MQ0=0;MQRankSum=0.686;QD=29.66;ReadPosRankSum=2.928;VQSLOD=2.3073;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:80.06:0,80,715	1/1:0,9:9:27.08:311,27,0	0/0:10,0:12:24.86:0,25,200	0/0:6,0:6:9:0,9,80	1/1:4,25:29:69.20:794,69,0	0/0:11,0:11:24.01:0,24,220	0/0:32,0:32:81.03:0,81,741	0/0:32,0:32:75.03:0,75,687	1/1:1,17:18:48.14:554,48,0	0/0:21,0:21:51.02:0,51,467	0/0:14,0:14:33:0,33,302	0/0:21,0:21:60.03:0,60,549	0/0:21,0:21:63.03:0,63,577	0/0:32,0:32:93.05:0,93,851	1/1:1,18:19:48.14:554,48,0	1/1:3,25:28:69.21:796,69,0	0/0:18,0:18:47.99:0,48,433	0/0:30,0:30:72.03:0,72,659	0/0:17,0:17:48.03:0,48,439	0/0:24,0:24:69.04:0,69,632	0/0:19,0:19:54.03:0,54,494	0/0:17,0:17:48.03:0,48,439	0/0:18,0:18:51.02:0,51,467	0/0:27,0:27:69.03:0,69,632	1/1:2,28:30:81.24:935,81,0	0/0:43,0:43:99:0,126,1152	0/0:31,0:31:87.05:0,87,796	0/0:11,0:11:33:0,33,296
chr10	95688178	.	TTA	T	2812.12	PASS	AB=0.968;AC=34;AF=0.607;AN=56;BaseQRankSum=-2.231;DP=456;FS=0.000;HRun=0;HaplotypeScore=92.1881;InbreedingCoeff=0.2860;MQ=56.67;MQ0=19;MQRankSum=2.494;QD=7.23;ReadPosRankSum=-1.216;VQSLOD=2.9228;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:29:67.67:81,0,68	0/0:5,0:5:7.82:0,8,69	0/0:14,0:7:18.01:0,18,272	0/0:13,0:7:21.02:0,21,266	0/1:28,0:26:9.25:9,0,351	1/1:14,0:13:32.08:134,32,0	0/1:12,0:11:2.74:54,0,3	0/1:30,0:25:99:160,0,153	0/1:6,2:7:54.17:60,0,54	1/1:17,1:18:47.34:283,47,0	1/1:12,0:11:9.29:93,9,0	1/1:16,0:16:17.84:183,18,0	1/1:13,0:12:5.50:77,6,0	1/1:18,0:18:20.13:137,20,0	0/0:10,0:9:21:0,21,208	0/0:8,0:7:17.80:0,18,175	0/1:28,2:29:9.40:156,0,9	0/1:22,0:20:25.36:131,0,25	1/1:22,0:21:40.25:302,40,0	1/1:24,0:24:57.88:283,58,0	0/1:16,1:17:25.20:176,0,25	1/1:11,1:12:26.77:166,27,0	0/1:12,0:10:0.10:41,0,0	1/1:5,0:4:7.80:37,8,0	0/0:17,0:14:29.94:0,30,266	1/1:23,1:24:33.22:295,33,0	1/1:13,1:13:9.90:137,10,0	0/1:8,0:8:5.48:5,0,79
chr10	95688179	.	TA	T	8086.20	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=-6.505;DP=450;FS=0.491;HRun=1;HaplotypeScore=67.0817;InbreedingCoeff=0.7526;MQ=55.39;MQ0=20;MQRankSum=0.270;QD=22.65;ReadPosRankSum=-1.712;VQSLOD=4.3604;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,1:29:41.03:303,41,0	0/0:5,0:5:8.42:0,8,48	0/0:13,0:6:11.24:0,11,203	0/0:13,0:7:20.37:0,20,208	0/0:26,1:25:34.38:0,34,269	1/1:1,13:13:36.12:496,36,0	1/1:3,9:11:13.47:279,13,0	1/1:27,1:23:1.61:231,2,0	0/1:8,0:7:31.12:37,0,31	1/1:1,16:17:51.06:618,51,0	1/1:3,9:11:26.31:337,26,0	1/1:6,10:16:36.34:513,36,0	1/1:2,11:12:19.76:290,20,0	1/1:1,16:17:35.31:455,35,0	0/0:10,0:9:20.12:0,20,135	0/0:8,0:7:17.24:0,17,122	1/1:30,0:29:67.35:424,67,0	1/1:21,1:20:47.35:309,47,0	1/1:2,20:21:56.91:668,57,0	1/1:1,24:24:65.97:787,66,0	1/1:8,9:17:1.15:427,1,0	1/1:5,7:12:35.99:395,36,0	1/1:4,7:9:16.70:226,17,0	1/1:3,2:4:8.69:99,9,0	0/0:17,0:14:27.70:0,28,149	1/1:9,15:24:62.14:770,62,0	1/1:3,11:13:26.30:401,26,0	0/1:8,0:8:1.70:20,0,2
chr10	95688271	.	GC	G	1441.05	PASS	AB=0.694;AC=20;AF=0.357;AN=56;BaseQRankSum=4.430;DP=356;FS=0.000;HRun=11;HaplotypeScore=55.6630;InbreedingCoeff=0.5580;MQ=55.63;MQ0=19;MQRankSum=4.128;QD=8.28;ReadPosRankSum=6.048;VQSLOD=1.5305;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,12:21:20.21:171,0,20	1/1:5,0:8:4.54:12,5,0	0/0:12,0:12:0.46:0,0,212	0/0:12,0:3:3.01:0,3,32	1/1:3,0:18:20.84:60,21,0	0/0:10,0:10:9.46:0,9,85	0/0:15,1:16:2.23:0,2,165	0/0:8,0:10:5.85:0,6,46	1/1:1,0:5:6.01:18,6,0	0/0:8,0:7:3.47:0,3,33	0/0:5,0:5:3.01:0,3,32	0/0:15,0:15:30.34:0,30,255	0/0:16,1:14:8.27:0,8,236	0/1:4,2:6:27.40:37,0,27	1/1:1,1:14:25.06:89,25,0	1/1:4,0:13:20.36:59,20,0	1/1:3,23:25:59.91:492,60,0	1/1:1,17:17:35.94:296,36,0	0/0:14,0:12:15.92:0,16,162	0/0:7,0:7:5.97:0,6,52	0/0:11,0:9:12.03:0,12,127	0/0:7,0:6:8.98:0,9,84	0/0:14,0:12:6.02:0,6,64	0/0:8,0:7:8.94:0,9,72	1/1:8,0:21:32.37:94,32,0	1/1:7,12:19:37.65:301,38,0	0/0:12,1:12:5.33:0,5,226	0/0:2,0:1:2.84:0,3,14
chr10	95690017	.	C	CA	4199.75	PASS	AB=0.746;AC=39;AF=0.696;AN=56;BaseQRankSum=2.100;DP=589;FS=2.624;HRun=13;HaplotypeScore=99.7194;InbreedingCoeff=0.1802;MQ=50.41;MQ0=21;MQRankSum=-1.645;QD=8.92;ReadPosRankSum=-2.960;VQSLOD=2.4128;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:38:47.68:0,48,150	0/1:7,5:12:20.19:110,0,20	0/1:9,1:6:3.92:4,0,49	0/0:10,0:6:14.71:0,15,95	0/1:11,12:25:28.59:306,0,29	0/1:10,9:19:14.10:155,0,14	1/1:5,5:9:12.01:111,12,0	1/1:27,1:38:37.20:199,37,0	1/1:11,13:22:12.46:258,12,0	1/1:12,12:24:11.72:305,12,0	0/1:17,8:24:6.78:235,0,7	1/1:6,4:11:17.76:138,18,0	1/1:6,7:13:4.69:117,5,0	1/1:10,7:17:2.73:92,3,0	0/1:10,9:19:14.08:168,0,14	1/1:10,12:22:15.02:139,15,0	0/0:36,1:31:31.73:0,32,335	0/0:27,0:27:49.56:0,50,333	0/1:16,6:21:40.39:89,0,40	1/1:14,10:24:6.15:239,6,0	0/1:10,1:10:20.85:21,0,21	0/1:11,8:21:21.93:142,0,22	1/1:4,14:20:30.60:317,31,0	1/1:6,8:16:29.67:240,30,0	1/1:7,13:21:15.21:271,15,0	1/1:11,12:24:5.24:282,5,0	1/1:7,9:16:8.51:166,9,0	1/1:15,1:15:2.55:95,3,0
chr10	95690030	.	AT	A	2697.35	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=5.346;DP=530;FS=10.002;HRun=1;HaplotypeScore=100.7723;InbreedingCoeff=0.9869;MQ=65.49;MQ0=9;MQRankSum=0.062;QD=10.70;ReadPosRankSum=-0.848;VQSLOD=0.5566;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:46.60:0,47,263	0/0:17,0:17:47.96:0,48,445	0/0:16,0:12:29.08:0,29,292	0/0:14,0:10:23.21:0,23,295	0/0:27,0:27:80.79:0,81,713	1/1:17,0:17:21.11:162,21,0	1/1:10,0:10:26.03:174,26,0	0/0:27,0:27:64.92:0,65,569	0/0:20,0:18:41.90:0,42,344	1/1:30,0:29:59.18:457,59,0	1/1:19,1:20:35.71:217,36,0	1/1:12,0:12:23.37:155,23,0	1/1:14,0:14:23.24:193,23,0	1/1:13,0:13:18.35:137,18,0	0/0:16,0:16:38.95:0,39,341	0/0:15,0:15:23.78:0,24,193	0/0:35,0:32:77.53:0,78,860	0/0:22,0:21:57.57:0,58,687	1/1:20,1:19:13.52:217,14,0	1/1:15,0:15:19.88:101,20,0	1/1:9,1:10:12.52:142,13,0	1/1:17,0:17:16.41:128,16,0	1/1:23,0:23:34.18:194,34,0	1/1:12,0:12:30.16:145,30,0	0/0:18,0:17:41.86:0,42,342	1/1:21,0:21:45.35:281,45,0	1/1:16,1:16:33.06:226,33,0	0/0:15,0:12:20.96:0,21,177
chr10	95690811	.	T	TGG	197.12	PASS	AB=0.875;AC=6;AF=0.107;AN=56;BaseQRankSum=-0.032;DP=537;FS=58.945;HRun=0;HaplotypeScore=79.7222;InbreedingCoeff=-0.1303;MQ=47.34;MQ0=48;MQRankSum=-0.144;QD=2.46;ReadPosRankSum=2.808;VQSLOD=-0.6834;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:58.68:0,59,680	0/1:4,0:4:17.95:18,0,28	0/0:34,0:9:0.29:0,0,113	0/0:26,0:3:6.01:0,6,30	0/1:17,1:15:6.92:7,0,212	0/0:15,0:14:41.60:0,42,483	0/0:19,0:17:42.07:0,42,485	0/0:27,0:23:55.04:0,55,653	0/1:8,4:11:96.45:125,0,96	0/0:27,0:21:51.06:0,51,564	0/0:22,0:22:60.14:0,60,702	0/0:17,0:17:33.06:0,33,375	0/0:17,0:15:39.11:0,39,464	0/0:13,0:10:26.57:0,27,289	0/1:10,4:13:58.56:59,0,260	0/1:7,2:9:27:80,0,27	0/0:23,0:23:35.70:0,36,419	0/0:31,0:28:35.84:0,36,395	0/0:21,0:18:50.97:0,51,614	0/0:13,0:11:27.07:0,27,316	0/0:10,0:9:24.03:0,24,268	0/0:10,0:10:26.08:0,26,265	0/0:13,0:12:32.21:0,32,410	0/0:17,0:17:23.82:0,24,300	0/1:22,1:20:28.63:29,0,397	0/0:30,0:29:83.25:0,83,990	0/0:15,0:14:42.13:0,42,518	0/0:19,0:18:48.09:0,48,564
chr10	95692110	.	TAA	T	1075.92	PASS	AB=0.882;AC=13;AF=0.232;AN=56;BaseQRankSum=6.224;DP=420;FS=5.708;HRun=13;HaplotypeScore=58.5018;InbreedingCoeff=0.8824;MQ=79.39;MQ0=3;MQRankSum=0.135;QD=14.54;ReadPosRankSum=2.227;VQSLOD=2.3397;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:56.65:0,57,754	1/1:0,5:5:15.02:145,15,0	0/0:23,0:14:11.07:0,11,68	0/1:13,1:13:0.89:1,0,89	1/1:2,8:11:23.75:216,24,0	0/0:23,0:26:68.64:0,69,901	0/0:15,0:15:33:0,33,394	0/0:25,0:26:51.14:0,51,700	1/1:0,9:11:29.53:257,30,0	0/0:17,0:17:36.11:0,36,505	0/0:10,0:10:27.08:0,27,375	0/0:16,0:16:39.04:0,39,468	0/0:9,0:9:17.93:0,18,190	0/0:17,0:17:48.08:0,48,615	1/1:2,14:16:33.03:320,33,0	1/1:1,7:8:18.03:175,18,0	0/0:24,0:24:66.20:0,66,921	0/0:20,0:20:50.71:0,51,665	0/0:17,0:18:26.31:0,26,559	0/0:11,0:12:29.56:0,30,364	0/0:11,0:11:30.08:0,30,401	0/0:5,0:5:3.01:0,3,44	0/0:4,0:4:9.03:0,9,130	0/0:13,0:13:36.08:0,36,464	1/1:1,7:8:14.98:145,15,0	0/0:19,0:21:32.60:0,33,442	0/0:24,0:25:66.13:0,66,893	0/0:11,0:11:33.07:0,33,408
chr10	95692634	.	G	GC	10513.65	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-9.265;DP=567;FS=0.326;HRun=5;HaplotypeScore=58.2552;InbreedingCoeff=0.9962;MQ=85.13;MQ0=0;MQRankSum=-3.003;QD=34.14;ReadPosRankSum=1.801;VQSLOD=5.1862;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:89.26:0,89,924	0/0:12,0:12:30.03:0,30,310	0/0:18,0:18:50.64:0,51,499	0/0:16,0:16:31.50:0,31,289	0/0:11,0:11:30.07:0,30,322	1/1:2,17:19:51.17:671,51,0	1/1:2,20:22:51.17:671,51,0	0/0:17,0:17:45.08:0,45,474	0/0:25,0:25:66.11:0,66,682	1/1:0,16:16:45.15:589,45,0	1/1:1,9:10:24.08:313,24,0	1/1:5,28:33:78.25:1018,78,0	1/1:0,21:22:66.20:854,66,0	1/1:0,16:16:48.16:631,48,0	0/0:24,0:24:66.14:0,66,695	0/0:17,0:17:45.02:0,45,451	0/0:28,0:28:75.15:0,75,787	0/0:21,0:21:63.14:0,63,668	1/1:1,15:16:48.16:629,48,0	1/1:2,7:9:18.06:236,18,0	1/1:3,35:38:96.31:1262,96,0	1/1:1,16:17:45.15:590,45,0	1/1:2,13:15:36.12:473,36,0	1/1:1,28:29:81.26:1065,81,0	0/0:20,0:20:57.14:0,57,612	1/1:3,24:27:72.17:920,72,0	1/1:3,16:19:45.15:592,45,0	0/0:8,0:8:15.03:0,15,161
chr10	95693359	.	G	GT	1686.36	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-1.335;DP=430;FS=13.190;HRun=11;HaplotypeScore=45.9865;InbreedingCoeff=0.9079;MQ=58.44;MQ0=12;MQRankSum=-4.246;QD=15.91;ReadPosRankSum=2.143;VQSLOD=3.2395;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:31.73:374,32,0	0/0:7,0:7:11.92:0,12,92	0/0:22,0:7:14.44:0,14,113	0/0:11,0:3:0.55:0,1,23	0/0:10,1:10:17.90:0,18,139	0/0:11,0:11:26.82:0,27,202	0/0:18,0:17:41.79:0,42,320	1/1:9,13:15:9.78:263,10,0	0/0:11,0:11:20.89:0,21,162	0/0:8,0:8:20.90:0,21,162	0/0:10,0:10:29.48:0,29,216	0/0:15,0:13:35.86:0,36,278	0/0:10,0:10:18.39:0,18,141	0/0:19,1:20:23.23:0,23,351	0/0:11,0:11:29.48:0,29,218	0/0:18,0:17:47.82:0,48,371	1/1:5,24:29:65.93:642,66,0	1/1:4,15:19:38.70:364,39,0	0/0:22,0:15:37.89:0,38,283	0/0:14,0:14:38.83:0,39,301	0/0:21,0:20:41.34:0,41,324	0/0:8,0:7:14.92:0,15,116	0/0:5,0:5:14.94:0,15,116	0/0:11,0:11:26.86:0,27,206	0/0:11,0:10:23.90:0,24,186	0/0:25,0:27:64.74:0,65,491	0/0:21,0:21:62.76:0,63,486	1/1:0,13:13:21.04:213,21,0
chr10	95694492	.	ATTGTCTTATTCCTCTAAT	A	23361.65	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=17.565;DP=632;FS=2.993;HRun=0;HaplotypeScore=306.5282;InbreedingCoeff=0.9888;MQ=85.30;MQ0=0;MQRankSum=-16.505;QD=83.73;ReadPosRankSum=5.364;VQSLOD=4.0467;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,148,11581	0/0:4,0:4:12.04:0,12,1048	0/0:29,0:29:84.27:0,84,5350	0/0:25,0:25:72.25:0,72,5126	0/0:21,0:21:63.22:0,63,4996	1/1:4,11:15:21.07:1076,21,0	1/1:9,16:25:33.11:1691,33,0	0/0:41,0:41:99:0,117,8382	0/0:29,0:29:87.27:0,87,5960	1/1:4,16:20:48.16:2461,48,0	1/1:4,7:11:15.05:722,15,0	1/1:6,21:27:57.20:2840,57,0	1/1:4,10:14:33.11:1691,33,0	1/1:10,11:22:29.40:1442,29,0	0/0:45,0:45:99:0,126,10005	0/0:20,0:20:60.19:0,60,4539	0/0:32,0:32:84.29:0,84,6728	0/0:25,0:25:75.26:0,75,6196	1/1:6,12:18:33.08:1232,33,0	1/1:1,8:9:18.06:877,18,0	1/1:12,13:25:15.05:761,15,0	1/1:3,11:14:27.09:1384,27,0	1/1:5,10:15:27.09:1333,27,0	1/1:5,16:21:26.26:1328,26,0	0/0:24,0:24:66.23:0,66,4818	1/1:8,20:28:57.20:2831,57,0	1/1:1,14:15:33.11:1692,33,0	0/0:9,0:9:24.08:0,24,1955
chr10	95694834	.	CAAAACAAAAG	C	491.73	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.746;DP=615;FS=1.042;HRun=0;HaplotypeScore=182.2436;InbreedingCoeff=0.9008;MQ=69.84;MQ0=4;MQRankSum=1.509;QD=35.12;ReadPosRankSum=-0.560;VQSLOD=3.3054;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:63.22:0,63,2786	0/0:3,0:3:9.03:0,9,455	0/0:64,0:44:46.36:0,46,1504	0/0:67,0:38:22.57:0,23,1188	0/0:9,0:9:21.07:0,21,900	0/0:19,0:19:48.16:0,48,2292	0/0:32,0:32:87.28:0,87,3970	1/1:2,7:9:21.03:329,21,0	0/0:22,0:22:51.16:0,51,2438	0/0:21,0:21:60.21:0,60,2805	0/0:13,0:12:30.10:0,30,1411	0/0:21,0:21:45.13:0,45,1838	0/0:19,0:19:51.04:0,51,2044	0/0:18,0:18:45.14:0,45,1864	0/0:26,0:26:72.22:0,72,3079	0/0:29,0:29:75.24:0,75,3439	0/0:26,0:26:66.19:0,66,2815	0/0:30,0:30:72.11:0,72,2822	0/0:18,0:16:27.09:0,27,993	0/0:9,0:9:8.95:0,9,456	0/0:11,0:11:27.09:0,27,1192	0/0:12,0:12:18.06:0,18,807	0/0:10,0:10:24:0,24,928	0/0:32,0:32:66.14:0,66,2805	0/0:15,0:15:42.10:0,42,1694	0/0:24,0:24:69.24:0,69,2990	0/0:23,0:22:54.14:0,54,2292	1/1:1,4:5:9.03:275,9,0
chr10	95695076	.	GGAGA	G	4427.81	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=12.824;DP=609;FS=13.562;HRun=0;HaplotypeScore=154.7901;InbreedingCoeff=0.7327;MQ=60.97;MQ0=17;MQRankSum=-12.813;QD=25.30;ReadPosRankSum=1.173;VQSLOD=4.2427;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:55.28:132,0,55	1/1:1,2:3:9:128,9,0	0/0:53,0:21:36.91:0,37,547	0/0:83,0:33:64.58:0,65,985	1/1:5,9:14:30.04:443,30,0	0/0:12,0:12:30.09:0,30,705	0/0:26,0:26:66.21:0,66,1583	1/1:8,9:17:30.01:432,30,0	1/1:7,15:22:42.53:839,43,0	0/0:28,0:28:81.28:0,81,1988	0/0:8,0:8:18.05:0,18,382	0/0:28,0:28:78.27:0,78,1961	0/0:19,0:19:45:0,45,1043	0/0:19,0:19:51.18:0,51,1302	1/1:5,14:19:47.18:662,47,0	1/1:5,20:25:62.47:948,62,0	0/1:17,0:17:43.19:89,0,43	0/1:9,0:9:23.41:23,0,28	0/0:20,0:20:48.16:0,48,1199	0/0:12,0:12:29.95:0,30,659	0/0:23,0:23:57.18:0,57,1352	0/0:15,0:15:42.09:0,42,882	0/0:16,0:16:45.14:0,45,1049	0/0:22,0:21:45.09:0,45,962	1/1:1,16:17:41.13:662,41,0	0/0:33,0:33:81.28:0,81,2046	0/0:16,0:17:51.17:0,51,1232	1/1:2,1:3:5.93:70,6,0
chr10	95695081	.	GAGAGAGAA	G	2615.18	PASS	AB=0.944;AC=19;AF=0.339;AN=56;BaseQRankSum=13.325;DP=607;FS=35.943;HRun=0;HaplotypeScore=197.8915;InbreedingCoeff=0.7201;MQ=58.74;MQ0=18;MQRankSum=-12.334;QD=15.47;ReadPosRankSum=2.522;VQSLOD=1.1154;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,10:27:38.79:646,39,0	0/1:3,0:3:20.83:22,0,21	0/0:53,0:21:44.72:0,45,754	0/0:84,0:33:52.02:0,52,914	1/1:14,0:14:3.97:146,4,0	0/0:13,0:13:30.51:0,31,859	0/0:25,0:25:64.07:0,64,2305	0/1:14,0:14:27:27,0,48	1/1:23,0:23:22.44:363,22,0	0/0:27,0:27:81.26:0,81,2661	0/0:6,0:6:15.04:0,15,456	0/0:28,0:28:81.26:0,81,2909	0/0:18,0:18:45.01:0,45,1494	0/0:20,0:20:57.19:0,57,1869	1/1:18,0:18:23.18:323,23,0	1/1:23,0:23:23.68:416,24,0	1/1:12,5:17:22.98:339,23,0	0/1:8,2:10:3.74:133,0,4	0/0:20,0:20:55.95:0,56,1435	0/0:13,0:13:3.73:0,4,968	0/0:23,0:23:60.14:0,60,1884	0/0:16,0:16:41.73:0,42,1130	0/0:17,0:16:42.13:0,42,1217	0/0:27,0:25:52.08:0,52,1621	1/1:17,0:17:33.88:355,34,0	0/0:30,0:30:81.22:0,81,2771	0/0:18,0:18:54.17:0,54,1938	1/1:3,0:3:5.95:46,6,0
chr10	95695099	.	GAGAGAGAC	G	5901.86	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=12.730;DP=588;FS=16.890;HRun=0;HaplotypeScore=187.6873;InbreedingCoeff=0.7341;MQ=57.52;MQ0=12;MQRankSum=-10.503;QD=36.43;ReadPosRankSum=-2.229;VQSLOD=2.6390;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:75.92:76,0,172	1/1:1,1:2:3.01:78,3,0	0/0:47,0:26:61.88:0,62,1527	0/0:68,0:32:49.26:0,49,1470	1/1:1,12:13:27.05:552,27,0	0/0:11,0:11:27.09:0,27,833	0/0:33,0:33:74.76:0,75,2587	1/1:6,11:17:27.09:567,27,0	1/1:5,15:20:47.58:1187,48,0	0/0:24,0:24:54.65:0,55,2183	0/0:6,0:6:8.70:0,9,389	0/0:26,0:26:69.20:0,69,2558	0/0:17,0:17:42.10:0,42,1350	0/0:18,0:18:39.13:0,39,1674	1/1:4,13:17:38.80:994,39,0	1/1:6,15:21:47.19:1209,47,0	0/1:19,0:19:42.74:43,0,171	0/1:8,0:8:3.96:4,0,23	0/0:21,0:21:49.98:0,50,1510	0/0:11,0:11:30.09:0,30,1118	0/0:29,0:29:61.56:0,62,2210	0/0:17,0:17:30.42:0,30,1492	0/0:17,0:16:27.08:0,27,999	0/0:31,0:29:69.85:0,70,2312	1/1:3,13:16:39.13:978,39,0	0/0:25,0:25:64.57:0,65,2543	0/0:20,0:20:57.18:0,57,2059	1/1:0,3:3:9.03:214,9,0
chr10	95695124	.	AAC	A	61.97	PASS	AB=0.940;AC=13;AF=0.260;AN=50;BaseQRankSum=3.478;DP=556;FS=2.506;HRun=0;HaplotypeScore=161.0755;InbreedingCoeff=0.2485;MQ=50.35;MQ0=10;MQRankSum=-1.871;QD=0.38;ReadPosRankSum=-0.664;VQSLOD=2.7921;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:26:0.45:1,0,0	./.	./.	./.	0/0:17,0:17:2.59:0,3,40	0/1:13,2:16:64.63:65,0,157	0/0:37,0:37:14.56:0,15,416	0/0:17,0:17:6.73:0,7,36	0/0:25,0:25:0.49:0,0,19	0/1:17,0:17:10.53:11,0,87	0/1:7,0:7:0:0,0,0	0/1:22,2:24:19.89:20,0,78	0/0:19,0:19:18.02:0,18,228	0/0:17,0:17:15.02:0,15,183	0/0:21,0:22:2.02:0,2,6	0/0:23,0:24:11.82:0,12,123	1/1:20,0:20:10.81:50,11,0	1/1:7,0:6:2.87:15,3,0	1/1:19,0:19:2.97:21,3,0	0/0:12,0:12:5.98:0,6,48	0/1:26,0:26:3.94:4,0,169	0/0:18,0:18:15.04:0,15,198	0/0:10,0:9:0.54:0,1,58	0/0:36,0:34:33.05:0,33,403	0/0:17,0:17:0:0,0,0	0/0:21,0:21:8.81:0,9,81	0/0:16,0:16:15.03:0,15,197	0/0:6,0:5:11.90:0,12,110
chr10	95695171	.	ACACACGCACG	A	1217.98	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=7.845;DP=590;FS=0.643;HRun=0;HaplotypeScore=173.4990;InbreedingCoeff=0.1960;MQ=58.11;MQ0=18;MQRankSum=-2.103;QD=5.49;ReadPosRankSum=-0.827;VQSLOD=2.5941;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,23:30:0.47:1,0,0	0/1:4,0:4:0:0,0,0	0/1:22,0:11:8.33:8,0,177	0/1:23,0:20:17.72:18,0,518	0/1:19,0:19:99:214,0,145	0/0:30,0:29:75.22:0,75,1972	0/0:42,0:42:81.12:0,81,2825	0/1:14,0:14:53.60:144,0,54	0/1:19,0:19:99:264,0,157	0/0:24,0:23:67.25:0,67,1384	0/0:15,0:13:23.73:0,24,550	0/0:22,0:22:45.60:0,46,917	0/0:20,0:20:45.05:0,45,1413	0/0:18,0:18:45.14:0,45,1318	0/1:21,0:21:0.93:31,0,1	0/1:20,0:20:99:155,0,399	1/1:4,28:32:12.04:366,12,0	1/1:2,7:8:3.01:99,3,0	0/0:15,0:15:36.12:0,36,636	0/0:10,0:10:21.07:0,21,444	0/0:54,0:50:99:0,119,2294	0/0:19,0:19:42.14:0,42,1209	0/0:11,0:10:27.09:0,27,588	0/0:40,0:37:78.26:0,78,2149	0/0:14,0:14:0:0,0,0	0/0:20,0:19:51.64:0,52,976	0/0:14,0:14:35.62:0,36,957	0/1:8,0:7:65.59:66,0,325
chr10	95695184	.	CGT	C	1172.58	PASS	AB=0.519;AC=13;AF=0.250;AN=52;BaseQRankSum=7.900;DP=517;FS=3.846;HRun=0;HaplotypeScore=83.9698;InbreedingCoeff=0.8453;MQ=71.51;MQ0=7;MQRankSum=-3.117;QD=14.66;ReadPosRankSum=-0.478;VQSLOD=3.2598;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,4:4:3.01:33,3,0	0/0:29,0:18:47.62:0,48,763	0/0:31,0:28:62.11:0,62,1177	1/1:8,7:15:19.45:248,19,0	0/0:26,0:26:78.23:0,78,1370	0/0:26,0:26:72.25:0,72,1348	1/1:0,12:12:29.86:329,30,0	1/1:11,4:15:29.92:357,30,0	0/0:20,0:20:60.21:0,60,1123	0/0:18,0:18:45.15:0,45,825	0/0:19,0:19:48.64:0,49,899	0/0:17,0:17:48.16:0,48,898	0/0:21,0:21:56.39:0,56,955	0/1:1,13:14:0.93:29,0,1	1/1:13,4:17:13.90:277,14,0	0/0:28,0:28:9.33:0,9,58	0/0:8,0:7:5.81:0,6,55	0/0:18,0:17:54.18:0,54,972	0/0:8,0:8:21.07:0,21,378	0/0:44,0:43:99:0,120,2243	0/0:17,0:17:48.16:0,48,890	0/0:12,0:12:33.11:0,33,581	0/0:27,0:27:72.25:0,72,1347	./.	0/0:19,0:18:54.19:0,54,1002	0/0:14,0:14:42.08:0,42,715	1/1:2,1:3:4.59:71,5,0
chr10	95696445	.	GTA	G	1102.20	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=11.202;DP=614;FS=23.466;HRun=0;HaplotypeScore=90.8992;InbreedingCoeff=0.8630;MQ=68.83;MQ0=4;MQRankSum=-6.261;QD=7.35;ReadPosRankSum=0.091;VQSLOD=1.6054;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:50:95.93:0,96,974	1/1:9,0:9:14.77:125,15,0	0/0:18,0:10:23.90:0,24,223	0/0:18,0:14:28.95:0,29,280	1/1:24,0:24:5.99:50,6,0	0/1:19,0:18:15.85:16,0,119	0/0:31,0:31:68.68:0,69,886	1/1:24,0:23:65.59:526,66,0	1/1:17,0:17:17.73:148,18,0	0/0:28,0:28:75.05:0,75,924	0/0:21,0:21:39.31:0,39,707	0/0:25,0:25:64.81:0,65,904	0/0:28,0:26:59.62:0,60,728	0/0:16,0:16:32.03:0,32,403	1/1:17,0:17:8.99:76,9,0	1/1:23,0:23:17.98:152,18,0	0/0:30,0:30:66.45:0,66,900	0/0:17,0:17:36.05:0,36,515	0/0:8,0:8:23.88:0,24,202	0/0:13,0:13:29.68:0,30,460	0/0:35,0:35:83.36:0,83,1149	0/0:25,0:25:66.08:0,66,968	0/0:17,0:17:39.02:0,39,505	0/0:36,0:36:92.23:0,92,1313	1/1:11,0:11:8.99:76,9,0	0/0:30,0:30:70.62:0,71,947	0/0:17,0:17:27.78:0,28,498	1/1:0,6:6:9.03:132,9,0
chr10	95696446	.	TATACAC	T	1856.70	PASS	AB=0.960;AC=13;AF=0.232;AN=56;BaseQRankSum=8.815;DP=616;FS=10.069;HRun=0;HaplotypeScore=128.7866;InbreedingCoeff=0.8361;MQ=68.03;MQ0=4;MQRankSum=-4.494;QD=14.97;ReadPosRankSum=1.295;VQSLOD=2.1305;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:51:96.03:0,96,1593	1/1:1,7:9:15:309,15,0	0/0:17,0:9:23.90:0,24,223	0/0:18,0:14:28.95:0,29,280	1/1:0,24:24:6.02:145,6,0	0/0:19,0:18:38.40:0,38,486	0/0:31,0:31:78.60:0,79,1793	0/1:23,0:23:54.21:322,0,54	1/1:0,17:17:18.06:433,18,0	0/0:28,0:28:79.40:0,79,1734	0/0:20,0:20:51.15:0,51,1554	0/0:25,0:25:75.18:0,75,1957	0/0:28,0:26:62.70:0,63,1453	0/0:16,0:16:42.10:0,42,1039	1/1:0,17:17:9.03:218,9,0	1/1:0,23:23:18.06:436,18,0	0/0:30,0:30:75.02:0,75,1804	0/0:16,0:16:39.06:0,39,961	0/0:9,0:9:26.92:0,27,254	0/0:13,0:13:38.98:0,39,880	0/0:35,0:35:93.18:0,93,2283	0/0:25,0:25:66.11:0,66,1770	0/0:16,0:16:39.05:0,39,920	0/0:38,0:38:99:0,105,2541	1/1:2,8:10:9.01:170,9,0	0/0:33,0:33:79.66:0,80,1978	0/0:17,0:17:48.10:0,48,1180	0/0:6,0:6:9.01:0,9,83
chr10	95696448	.	TAC	T	496.78	PASS	AB=0.977;AC=22;AF=0.440;AN=50;BaseQRankSum=7.821;DP=630;FS=23.634;HRun=0;HaplotypeScore=95.1812;InbreedingCoeff=0.4804;MQ=64.46;MQ0=7;MQRankSum=-4.643;QD=1.85;ReadPosRankSum=1.142;VQSLOD=0.0285;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:56:46.77:0,47,383	1/1:9,0:9:11.36:56,11,0	./.	./.	1/1:24,0:24:5.68:28,6,0	1/1:7,9:17:20.89:214,21,0	0/0:29,3:32:11.88:0,12,578	1/1:21,0:21:5.26:32,5,0	1/1:18,0:18:16.81:83,17,0	0/0:29,0:29:39.48:0,39,505	0/0:21,0:21:8.98:0,9,542	0/0:24,2:26:14.55:0,15,571	0/0:24,4:26:35.80:0,36,473	0/1:15,1:16:12.53:13,0,275	1/1:18,0:18:8.52:42,9,0	1/1:23,0:23:17.04:84,17,0	0/0:29,2:31:11.62:0,12,580	0/0:17,0:17:27.04:0,27,362	./.	0/1:14,0:14:5.69:6,0,293	0/0:37,0:37:21.04:0,21,731	0/0:25,0:25:48.13:0,48,679	0/0:16,0:16:21.07:0,21,306	0/1:38,0:38:0.08:0,0,823	1/1:10,0:10:5.68:28,6,0	0/1:31,3:34:26.64:27,0,479	0/1:17,0:17:12.90:13,0,310	0/1:7,0:7:11.04:51,0,11
chr10	95698038	.	G	GGTTT	2907.95	PASS	AB=0.714;AC=5;AF=0.089;AN=56;BaseQRankSum=-10.165;DP=723;FS=19.629;HRun=0;HaplotypeScore=126.1495;InbreedingCoeff=0.7413;MQ=71.51;MQ0=1;MQRankSum=2.841;QD=32.31;ReadPosRankSum=-0.717;VQSLOD=2.0459;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,102,1592	0/0:4,0:4:6.02:0,6,96	0/0:27,0:24:15.01:0,15,185	0/0:30,0:28:26.68:0,27,351	0/0:24,0:24:30.10:0,30,476	0/0:19,0:19:39.12:0,39,598	0/0:17,0:17:30.10:0,30,478	0/0:31,0:31:23.91:0,24,359	0/0:23,0:23:36.11:0,36,552	0/0:37,0:37:69.18:0,69,1047	0/0:23,0:23:33.07:0,33,495	0/0:30,0:31:72.24:0,72,1126	0/0:29,0:29:48.15:0,48,736	0/0:15,0:15:33.10:0,33,500	0/0:16,0:16:33.11:0,33,525	0/0:17,0:17:30.10:0,30,476	1/1:14,23:37:60.20:1436,60,0	1/1:15,17:33:48.16:1147,48,0	0/1:12,8:19:19.46:455,0,19	0/0:17,0:17:30.10:0,30,478	0/0:31,0:31:72.25:0,72,1142	0/0:26,0:26:45.15:0,45,716	0/0:28,0:27:36.11:0,36,550	0/0:25,0:26:51.17:0,51,792	0/0:27,0:27:51.12:0,51,745	0/0:35,0:35:63.16:0,63,952	0/0:38,0:37:78.26:0,78,1202	0/0:15,0:15:36.11:0,36,549
chr10	95698254	.	CA	C	5779.51	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=5.922;DP=907;FS=0.322;HRun=3;HaplotypeScore=215.3926;InbreedingCoeff=0.9993;MQ=63.24;MQ0=0;MQRankSum=-4.604;QD=27.13;ReadPosRankSum=4.172;VQSLOD=3.9663;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,1825	1/1:0,8:8:24.08:297,24,0	0/0:22,0:22:55.99:0,56,784	0/0:29,0:26:66.19:0,66,902	1/1:2,35:35:24.06:298,24,0	0/0:22,0:22:48.63:0,49,692	0/0:35,0:35:97.95:0,98,1297	1/1:0,25:23:66.19:803,66,0	1/1:2,29:29:78.24:966,78,0	0/0:49,0:49:99:0,138,1958	0/0:28,0:28:60.46:0,60,749	0/0:51,0:51:99:0,142,1912	0/0:32,0:32:91.88:0,92,1166	0/0:50,0:50:99:0,136,1713	1/1:1,40:39:96.30:1188,96,0	1/1:1,35:35:93.29:1151,93,0	0/0:28,0:28:75.11:0,75,1070	0/0:19,0:19:54.16:0,54,758	0/0:25,0:25:72.23:0,72,1017	0/0:27,0:27:64.65:0,65,658	0/0:55,0:55:99:0,123,1545	0/0:38,0:38:84.24:0,84,1012	0/0:21,0:21:50.92:0,51,595	0/0:35,0:35:80.91:0,81,1098	1/1:0,23:23:51.05:631,51,0	0/0:43,0:42:99:0,123,1711	0/0:38,0:38:99:0,114,1538	1/1:0,12:12:36.11:446,36,0
chr10	95698328	.	G	GAC	732.07	PASS	AB=0.979;AC=15;AF=0.268;AN=56;BaseQRankSum=8.730;DP=1061;FS=32.647;HRun=0;HaplotypeScore=364.4935;InbreedingCoeff=0.2626;MQ=34.35;MQ0=9;MQRankSum=-4.517;QD=1.79;ReadPosRankSum=2.239;VQSLOD=0.5477;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:16.55:0,17,227	1/1:15,2:17:5.56:21,6,0	0/0:36,0:9:18.04:0,18,210	0/0:31,0:11:11.82:0,12,131	0/1:38,1:39:0:0,0,0	0/1:29,0:29:10.48:10,0,71	0/0:37,0:37:11.30:0,11,152	1/1:36,2:33:13.33:281,13,0	0/1:28,0:27:0.42:0,0,1	0/1:59,3:61:99:304,0,563	0/0:44,0:44:15.23:0,15,178	0/0:66,0:66:7.92:0,8,144	0/0:39,0:39:3.19:0,3,157	0/0:52,0:52:12.30:0,12,125	0/1:47,2:49:0.56:1,0,6	0/0:45,1:46:4.36:0,4,21	0/0:27,0:27:3.77:0,4,165	0/1:17,0:17:67.80:68,0,147	0/1:33,0:28:15.21:15,0,314	0/0:56,1:57:6.36:0,6,64	0/0:66,1:68:25.10:0,25,326	0/0:33,0:32:6.01:0,6,63	0/0:29,0:29:10.09:0,10,104	0/0:28,0:28:20.90:0,21,266	0/1:34,3:37:0:0,0,0	0/1:42,0:41:13.17:13,0,538	0/0:19,0:19:17.63:0,18,224	1/1:17,0:17:15.91:164,16,0
chr10	95698331	.	A	ATG	983.63	PASS	AB=0.901;AC=12;AF=0.214;AN=56;BaseQRankSum=4.263;DP=1039;FS=1.209;HRun=0;HaplotypeScore=355.3677;InbreedingCoeff=-0.0296;MQ=34.16;MQ0=9;MQRankSum=-1.803;QD=3.21;ReadPosRankSum=-0.669;VQSLOD=1.5981;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:19.06:0,19,336	0/1:14,1:17:31.29:31,0,37	0/0:35,0:9:23.58:0,24,325	0/0:29,0:11:24.41:0,24,306	1/1:27,6:36:1.67:2,2,0	0/1:28,0:28:42.39:42,0,109	0/0:36,0:36:11.31:0,11,195	0/1:33,0:32:99:638,0,164	0/1:17,10:26:25.62:26,0,54	0/0:59,0:59:57.87:0,58,1443	0/0:39,0:43:11.97:0,12,237	0/0:63,0:63:22.83:0,23,272	0/1:38,0:37:8.27:8,0,334	0/0:52,0:52:13.55:0,14,200	0/0:33,14:48:10.39:0,10,72	0/0:37,9:46:28.97:0,29,275	0/1:27,0:27:36.17:36,0,254	0/0:16,0:16:29.80:0,30,423	0/0:31,0:26:49.03:0,49,716	0/0:55,0:55:6.57:0,7,137	0/0:71,0:71:33.11:0,33,526	0/0:33,0:32:12.04:0,12,191	0/0:29,0:29:13.28:0,13,196	0/0:27,0:27:20.70:0,21,342	1/1:19,12:35:1.65:2,2,0	0/1:44,0:43:5.84:6,0,949	0/0:19,0:19:17.15:0,17,289	0/1:7,10:17:99:324,0,154
chr10	95698420	.	ACG	A	685.07	PASS	AB=0.951;AC=18;AF=0.321;AN=56;BaseQRankSum=2.615;DP=813;FS=2.550;HRun=0;HaplotypeScore=253.0339;InbreedingCoeff=-0.3291;MQ=41.06;MQ0=1;MQRankSum=-4.628;QD=1.27;ReadPosRankSum=-7.470;VQSLOD=0.6225;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:26,2:28:32.90:0,33,280	1/1:15,0:14:6.15:26,6,0	0/0:11,0:7:14.79:0,15,174	0/1:11,0:3:13.42:27,0,13	0/0:23,0:22:9.89:0,10,75	0/1:11,1:12:19.67:20,0,20	0/0:20,0:20:11.95:0,12,104	0/1:33,11:42:99:313,0,597	0/1:37,2:36:12.62:13,0,17	0/1:48,2:50:99:118,0,650	0/0:21,0:21:5.38:0,5,51	0/1:61,3:64:66.75:67,0,166	0/0:29,3:32:4.32:0,4,183	0/1:28,1:29:22.22:22,0,104	0/1:49,3:48:9.10:9,0,133	0/0:45,2:44:24.79:0,25,204	0/1:15,1:16:12.73:13,0,207	0/1:16,0:16:49.44:49,0,198	0/1:17,4:17:80.55:81,0,300	0/0:25,1:26:5.27:0,5,48	0/1:58,0:58:9.20:9,0,261	0/1:43,0:43:0.84:1,0,1	0/0:15,0:15:2.53:0,3,22	0/1:14,0:14:15.97:16,0,39	0/0:31,0:28:1.22:0,1,80	0/1:35,1:36:43.91:44,0,569	0/0:18,0:18:10.10:0,10,182	0/1:20,1:18:6.36:6,0,110
chr10	95698454	.	ATACT	A	3040.11	PASS	AB=0.984;AC=19;AF=0.339;AN=56;BaseQRankSum=15.157;DP=1327;FS=19.274;HRun=0;HaplotypeScore=486.1424;InbreedingCoeff=0.4646;MQ=41.29;MQ0=6;MQRankSum=-5.535;QD=5.17;ReadPosRankSum=3.134;VQSLOD=-0.1161;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,2:44:53.95:0,54,1472	0/1:22,0:21:14.35:109,0,14	0/0:55,0:28:75.22:0,75,1486	0/0:50,0:24:63.22:0,63,1637	1/1:35,0:34:14.44:150,14,0	0/0:20,1:21:17.17:0,17,520	0/0:34,0:34:31.98:0,32,915	0/1:28,0:24:56.52:285,0,57	1/1:57,0:54:23.80:370,24,0	0/1:82,2:83:99:259,0,3471	0/0:39,0:39:29.41:0,29,869	0/0:87,3:90:94.72:0,95,2995	0/0:53,4:57:39.99:0,40,2215	0/0:37,2:39:39.41:0,39,1128	1/1:72,0:69:40.64:387,41,0	1/1:65,0:62:50.97:605,51,0	0/1:28,1:29:0.94:1,0,1435	0/0:30,0:30:39.32:0,39,2081	0/1:22,1:22:77.19:77,0,1224	0/0:49,1:50:21.39:0,21,760	0/0:106,0:105:99:0,138,3530	0/0:61,0:61:40.92:0,41,1072	0/0:23,0:23:11.39:0,11,308	0/0:38,0:38:57.49:0,57,1544	1/1:45,0:42:23.34:252,23,0	0/1:64,1:65:99:159,0,3544	0/1:32,0:32:97.41:97,0,1108	1/1:28,0:25:31.57:481,32,0
chr10	95698455	.	TACTC	T	4833.24	PASS	AB=0.925;AC=19;AF=0.339;AN=56;BaseQRankSum=10.185;DP=1358;FS=13.379;HRun=0;HaplotypeScore=494.8539;InbreedingCoeff=0.6031;MQ=40.54;MQ0=7;MQRankSum=-4.426;QD=8.49;ReadPosRankSum=2.652;VQSLOD=1.4275;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:53.51:0,54,1462	0/1:10,13:22:13.72:111,0,14	0/0:57,0:27:68.98:0,69,1287	0/0:50,0:24:63.06:0,63,1611	1/1:13,21:35:12.16:234,12,0	0/0:21,0:21:17.17:0,17,492	0/0:34,0:34:31.98:0,32,893	1/1:16,12:24:15.40:662,15,0	1/1:19,40:55:16.09:610,16,0	0/1:81,0:83:99:179,0,3466	0/0:40,0:40:28.47:0,28,820	0/0:89,0:92:99:0,114,3027	0/0:59,0:59:68.49:0,68,2344	0/0:40,0:40:39.77:0,40,1068	1/1:28,47:70:33.93:621,34,0	1/1:19,49:64:54.17:1015,54,0	0/0:29,0:30:37.69:0,38,1507	0/0:32,0:32:44.81:0,45,2042	0/1:23,0:22:6.39:6,0,1108	0/0:51,0:51:34.99:0,35,803	0/0:109,0:107:99:0,143,3683	0/0:59,0:62:40.81:0,41,1089	0/0:22,0:23:12.77:0,13,322	0/0:40,0:41:41.47:0,41,1525	1/1:23,22:44:23.79:449,24,0	0/1:64,0:66:99:165,0,3433	0/1:30,0:32:35.87:36,0,1102	1/1:13,13:25:37.43:745,37,0
chr10	95698458	.	TCA	T	628.42	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=11.922;DP=1408;FS=12.999;HRun=0;HaplotypeScore=516.4153;InbreedingCoeff=0.6311;MQ=40.52;MQ0=7;MQRankSum=-2.370;QD=1.69;ReadPosRankSum=-0.148;VQSLOD=-0.2717;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:53.22:0,53,924	0/1:26,0:25:29.66:37,0,30	0/0:58,0:26:54.13:0,54,833	0/0:59,0:25:63.18:0,63,1039	1/1:37,0:36:9.33:47,9,0	0/0:22,0:22:18.05:0,18,309	0/0:36,0:36:31.02:0,31,562	0/1:28,0:23:12.50:80,0,12	0/1:61,0:57:7.60:87,0,8	0/0:84,2:85:99:0,109,2690	0/0:40,0:40:28.63:0,29,513	0/0:94,0:94:99:0,111,2043	0/0:61,0:62:93.47:0,93,1737	0/0:42,0:42:44.39:0,44,739	1/1:75,0:70:9.09:97,9,0	1/1:69,1:66:36.38:186,36,0	0/0:31,0:31:59.86:0,60,1031	0/0:33,0:33:61.86:0,62,1317	0/0:25,0:23:35.03:0,35,638	0/0:51,1:52:37.32:0,37,539	0/0:115,0:112:99:0,155,2611	0/0:61,1:63:47.72:0,48,791	0/0:25,0:25:12.79:0,13,209	0/0:43,1:44:41.45:0,41,959	1/1:38,7:42:29.64:145,30,0	0/0:68,2:70:21.68:0,22,2291	0/0:32,0:32:47.04:0,47,841	0/1:30,0:26:0.09:119,0,0
chr10	95698561	.	TAC	T	8029.80	PASS	AB=0.985;AC=19;AF=0.339;AN=56;BaseQRankSum=10.701;DP=1847;FS=12.493;HRun=0;HaplotypeScore=734.6743;InbreedingCoeff=0.8886;MQ=41.21;MQ0=27;MQRankSum=-2.348;QD=11.54;ReadPosRankSum=-1.697;VQSLOD=2.0589;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:42,30:69:99:1728,136,0	1/1:20,11:29:4.02:222,4,0	0/0:50,0:11:27.07:0,27,392	0/0:49,0:17:35.92:0,36,470	1/1:55,15:75:34:448,34,0	0/0:32,0:32:31.39:0,31,596	0/0:48,2:54:39.28:0,39,974	1/1:18,31:42:83.37:974,83,0	1/1:37,26:57:71.14:875,71,0	0/1:129,2:133:99:122,0,2846	0/0:55,0:61:47.76:0,48,811	0/0:107,0:107:99:0,105,2604	0/0:67,0:67:50.42:0,50,1847	0/0:75,1:76:47.93:0,48,1478	1/1:53,29:74:99:1394,112,0	1/1:43,26:62:83.47:1062,83,0	0/0:45,0:46:69.05:0,69,1333	0/0:31,0:31:51.59:0,52,1307	0/0:35,0:30:63.69:0,64,1022	0/0:88,0:92:35.73:0,36,723	0/0:120,0:117:99:0,248,4100	0/0:85,0:89:24.57:0,25,609	0/0:66,1:68:10.17:0,10,676	0/0:66,0:66:99:0,121,1990	1/1:67,18:85:51.38:674,51,0	0/0:57,0:57:33.96:0,34,1432	0/0:47,0:48:19.08:0,19,1121	1/1:20,9:27:31.73:530,32,0
chr10	95699496	.	CTCTTTCTT	C	5626.29	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.317;DP=469;FS=3.045;HRun=0;HaplotypeScore=119.0503;InbreedingCoeff=0.9504;MQ=53.99;MQ0=11;MQRankSum=-4.589;QD=39.90;ReadPosRankSum=-2.128;VQSLOD=4.3681;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.24:0,87,2883	1/1:8,0:8:21.07:426,21,0	0/0:14,0:5:6.02:0,6,96	0/0:15,0:2:4.80:0,5,27	1/1:4,19:24:30.09:452,30,0	0/0:19,0:19:57.19:0,57,1688	0/0:11,0:11:33.10:0,33,764	1/1:1,27:28:75.18:1210,75,0	1/1:21,0:21:41.18:377,41,0	0/0:20,0:20:60.13:0,60,1743	0/0:21,0:21:57.19:0,57,1547	0/0:12,0:12:36.11:0,36,1101	0/0:13,0:13:39.11:0,39,1171	0/0:9,0:9:24.08:0,24,944	1/1:23,0:23:66.21:1290,66,0	1/1:21,0:21:54.19:1161,54,0	0/0:19,0:17:11.98:0,12,171	0/0:18,0:17:45.15:0,45,797	0/0:19,0:15:42.14:0,42,1197	0/0:17,0:17:48.12:0,48,1468	0/0:6,0:6:18.05:0,18,573	0/0:9,0:9:24.07:0,24,860	0/0:14,0:14:39.13:0,39,1451	0/0:11,0:11:33.11:0,33,1019	1/1:10,0:9:24.08:460,24,0	0/0:24,0:24:69.23:0,69,2426	0/0:26,0:25:78.24:0,78,2724	1/1:5,1:6:14.92:249,15,0
chr10	95699498	.	CT	C	193.25	PASS	AB=0.784;AC=8;AF=0.143;AN=56;BaseQRankSum=9.242;DP=471;FS=2.200;HRun=3;HaplotypeScore=77.5210;InbreedingCoeff=0.2013;MQ=53.61;MQ0=11;MQRankSum=-6.685;QD=1.86;ReadPosRankSum=3.035;VQSLOD=-0.4966;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:86.84:0,87,1194	1/1:2,5:7:3.83:49,4,0	0/0:13,0:5:6.02:0,6,86	0/0:18,0:2:5.05:0,5,45	0/1:20,3:23:8.92:9,0,76	0/0:19,0:19:57.19:0,57,817	0/0:11,0:11:33.10:0,33,453	0/0:27,0:27:6.94:0,7,118	0/1:18,2:20:18.39:18,0,53	0/0:21,0:21:63.21:0,63,895	0/0:20,0:20:57.18:0,57,804	0/0:12,0:12:36.12:0,36,518	0/0:13,0:13:39.13:0,39,559	0/0:10,0:10:24.08:0,24,346	0/1:12,11:23:28.19:107,0,28	1/1:13,8:21:1.87:100,2,0	0/0:19,0:17:12.91:0,13,140	0/0:18,0:17:45.07:0,45,515	0/0:22,0:18:51.17:0,51,713	0/0:17,0:17:48.16:0,48,682	0/0:6,0:6:18.06:0,18,257	0/0:8,0:8:24.08:0,24,344	0/0:13,0:13:39.13:0,39,562	0/0:11,0:11:33.11:0,33,475	0/1:5,5:9:36.56:37,0,53	0/0:25,0:25:72.24:0,72,1031	0/0:26,0:25:78.26:0,78,1115	0/0:6,0:6:2.13:0,2,33
chr10	95699502	.	CTTT	C	1527.51	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=12.521;DP=476;FS=3.342;HRun=3;HaplotypeScore=89.6448;InbreedingCoeff=0.7223;MQ=52.72;MQ0=12;MQRankSum=-5.267;QD=11.23;ReadPosRankSum=-0.064;VQSLOD=0.1357;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.10:0,84,1871	1/1:2,5:7:19.29:164,19,0	0/0:15,0:4:7.58:0,8,122	0/0:23,0:2:1.82:0,2,5	1/1:20,3:23:8.26:77,8,0	0/0:20,0:20:60.20:0,60,1336	0/0:12,0:12:14.21:0,14,666	0/1:27,0:27:41.56:155,0,42	1/1:17,2:19:47.14:306,47,0	0/0:20,0:20:60.18:0,60,1247	0/0:18,0:18:54.17:0,54,1190	0/0:13,0:12:36.12:0,36,807	0/0:13,0:13:39.09:0,39,789	0/0:10,0:10:30.10:0,30,698	1/1:13,11:24:43.18:413,43,0	1/1:12,8:20:51.58:424,52,0	0/0:21,0:19:17.41:0,17,167	0/0:18,0:17:43.87:0,44,521	0/0:22,0:18:51.16:0,51,1066	0/0:15,0:15:45.12:0,45,942	0/0:5,0:5:15.05:0,15,355	0/0:8,0:8:24.07:0,24,522	0/0:13,0:13:39.13:0,39,927	0/0:11,0:11:33.11:0,33,756	1/1:5,5:9:4.41:126,4,0	0/0:24,0:24:72.24:0,72,1698	0/0:26,0:25:75.24:0,75,1773	0/1:6,0:6:36.27:45,0,36
chr10	95699505	.	TCTTC	T	1427.63	PASS	AB=0.873;AC=15;AF=0.268;AN=56;BaseQRankSum=10.531;DP=479;FS=1.915;HRun=0;HaplotypeScore=97.6136;InbreedingCoeff=0.6648;MQ=51.64;MQ0=14;MQRankSum=-8.130;QD=9.45;ReadPosRankSum=2.125;VQSLOD=2.6682;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:75.13:0,75,1557	1/1:7,0:7:15.04:163,15,0	0/0:19,0:4:2.90:0,3,16	0/0:27,0:1:0:0,0,0	1/1:23,0:23:9.03:107,9,0	0/0:20,0:20:42.12:0,42,884	0/0:12,0:12:16.70:0,17,310	0/0:28,0:28:6.86:0,7,40	1/1:19,0:19:22.75:116,23,0	0/0:17,0:17:36.11:0,36,787	0/0:18,0:18:33.10:0,33,705	0/0:13,0:12:24.05:0,24,446	0/0:12,0:12:24.08:0,24,538	0/0:10,0:10:27.08:0,27,556	1/1:23,0:23:36.79:357,37,0	1/1:21,0:20:30.56:313,31,0	0/1:8,13:19:14.54:53,0,15	1/1:19,0:18:24.08:374,24,0	0/0:21,0:17:36.06:0,36,674	0/0:12,0:12:33.11:0,33,766	0/0:6,0:6:15.04:0,15,299	0/0:7,0:7:18.06:0,18,443	0/0:13,0:13:33.09:0,33,718	0/0:11,0:11:24.07:0,24,476	0/1:12,0:11:8.74:114,0,9	0/0:24,0:24:66.14:0,66,1299	0/0:24,0:23:69.18:0,69,1465	0/1:6,0:6:17.81:18,0,33
chr10	95700920	.	C	CAAA	1418.61	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=8.894;DP=580;FS=4.997;HRun=13;HaplotypeScore=116.8670;InbreedingCoeff=0.9501;MQ=67.45;MQ0=0;MQRankSum=-5.679;QD=9.99;ReadPosRankSum=-6.164;VQSLOD=-0.6019;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,111,1691	1/1:10,0:9:10.86:115,11,0	0/0:22,0:13:31.79:0,32,310	0/0:17,0:15:29.35:0,29,268	1/1:11,14:26:42.95:385,43,0	0/0:13,0:13:36.11:0,36,547	0/0:20,0:20:54.10:0,54,758	1/1:27,0:25:22.05:205,22,0	1/1:17,0:17:9.89:103,10,0	0/0:18,0:18:48.16:0,48,739	0/0:17,0:17:48.15:0,48,682	0/0:26,0:26:62.53:0,63,880	0/0:20,0:20:57.15:0,57,839	0/0:15,0:15:45.11:0,45,615	1/1:14,0:14:2.80:54,3,0	1/1:17,0:17:24.08:332,24,0	0/0:31,0:31:87.11:0,87,1243	0/0:25,0:25:66.20:0,66,990	0/0:24,0:24:51.70:0,52,928	0/0:22,0:22:48.15:0,48,671	0/0:14,0:14:29.88:0,30,427	0/0:29,0:29:75.25:0,75,1119	0/0:19,0:19:51.17:0,51,776	0/0:15,0:15:45.13:0,45,652	1/1:15,0:14:14.98:162,15,0	0/0:28,0:28:75.25:0,75,1167	0/0:20,0:20:60.11:0,60,845	1/1:16,0:16:31.62:260,32,0
chr10	95701510	.	A	AAC	351.31	PASS	AB=0.904;AC=4;AF=0.071;AN=56;BaseQRankSum=2.808;DP=543;FS=2.215;HRun=0;HaplotypeScore=158.3549;InbreedingCoeff=-0.0795;MQ=50.33;MQ0=21;MQRankSum=-2.540;QD=3.55;ReadPosRankSum=4.261;VQSLOD=2.4297;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,21:35:59.62:391,0,60	0/0:8,0:7:16.89:0,17,115	0/0:21,0:5:8.96:0,9,83	0/0:30,0:10:20.30:0,20,140	0/1:23,0:22:22.98:23,0,148	0/0:17,0:16:6.20:0,6,80	0/0:15,0:15:41.82:0,42,345	0/1:28,0:31:35.77:36,0,265	0/0:15,0:15:35.92:0,36,236	0/0:23,0:22:51.28:0,51,388	0/0:17,0:17:28.28:0,28,219	0/0:24,0:23:57.16:0,57,456	0/0:12,0:12:35.73:0,36,331	0/0:13,0:11:29.62:0,30,224	0/0:24,0:24:58.67:0,59,362	0/0:16,0:16:41.69:0,42,257	0/0:26,0:23:50:0,50,361	0/0:8,0:8:22.80:0,23,167	0/0:24,0:20:52.89:0,53,458	0/0:22,0:21:45.25:0,45,476	0/0:18,0:18:37.23:0,37,285	0/0:17,0:17:32.10:0,32,280	0/0:20,0:20:28.64:0,29,208	0/0:7,0:7:7.88:0,8,144	0/0:23,0:24:24.37:0,24,312	0/0:23,0:22:46.73:0,47,435	0/0:19,0:19:54.71:0,55,463	0/1:8,0:7:2.47:2,0,48
chr10	95701514	.	AC	A	5231.65	PASS	AB=0.907;AC=54;AF=0.964;AN=56;BaseQRankSum=-0.720;DP=544;FS=2.566;HRun=1;HaplotypeScore=126.6473;InbreedingCoeff=0.1287;MQ=48.72;MQ0=22;MQRankSum=-1.097;QD=9.62;ReadPosRankSum=-0.098;VQSLOD=2.4419;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:55.93:315,56,0	1/1:8,0:7:15.44:90,15,0	0/1:17,4:5:16.51:17,0,27	0/1:29,1:10:7.11:7,0,33	1/1:23,0:22:42.41:235,42,0	1/1:16,0:15:16.59:89,17,0	1/1:15,0:15:36.89:198,37,0	1/1:33,0:31:62.05:345,62,0	1/1:14,1:15:34.61:203,35,0	1/1:23,0:22:57:326,57,0	1/1:17,0:17:28.68:137,29,0	1/1:23,0:22:54.02:296,54,0	1/1:13,0:13:30.72:154,31,0	1/1:13,0:11:28.23:150,28,0	1/1:24,0:24:46.42:258,46,0	1/1:16,0:16:32.55:162,33,0	1/1:26,1:24:46.06:300,46,0	1/1:8,0:8:19.28:128,19,0	1/1:21,2:18:45.31:234,45,0	1/1:21,1:21:19.84:190,20,0	1/1:19,0:19:26.93:172,27,0	1/1:18,0:17:37.26:206,37,0	1/1:19,0:19:26.27:120,26,0	1/1:7,0:7:16.15:90,16,0	1/1:24,0:24:47.40:244,47,0	1/1:24,1:24:51.66:311,52,0	1/1:19,0:18:39.99:242,40,0	1/1:7,0:6:4.17:13,4,0
chr10	95701515	.	C	CA	3903.23	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=5.083;DP=549;FS=7.238;HRun=13;HaplotypeScore=134.7631;InbreedingCoeff=0.2760;MQ=47.28;MQ0=23;MQRankSum=-6.239;QD=9.06;ReadPosRankSum=3.551;VQSLOD=1.9694;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:21.41:82,21,0	1/1:5,3:7:10.65:122,11,0	1/1:22,0:5:0.69:4,1,0	0/0:30,0:9:6.36:0,6,59	1/1:10,13:22:44.97:438,45,0	0/1:10,0:15:8.09:8,0,13	0/0:13,0:15:20.41:0,20,84	1/1:12,24:34:82.58:937,83,0	1/1:6,10:16:25.95:379,26,0	0/1:18,0:22:27.44:27,0,46	0/1:12,0:17:5.07:5,0,51	0/1:19,0:21:2.37:2,0,53	0/0:12,0:13:20.69:0,21,90	0/1:12,0:12:5.59:6,0,38	1/1:4,19:23:57:663,57,0	1/1:6,10:16:22.26:368,22,0	1/1:28,0:25:0.87:46,1,0	0/1:8,0:8:1.88:16,0,2	0/1:17,0:18:1.62:2,0,80	0/0:18,0:21:10.52:0,11,125	0/0:16,0:19:0.78:0,1,49	0/1:10,0:17:3.85:4,0,40	0/1:17,0:19:2.79:3,0,22	0/1:7,0:7:8.73:9,0,28	1/1:8,17:25:64.60:727,65,0	0/1:14,0:23:1.65:2,0,55	0/0:18,0:18:7.12:0,7,98	1/1:6,1:6:5.91:53,6,0
chr10	95701516	.	A	AC	1736.35	PASS	AB=0.990;AC=23;AF=0.411;AN=56;BaseQRankSum=5.335;DP=562;FS=11.679;HRun=1;HaplotypeScore=144.0543;InbreedingCoeff=-0.2197;MQ=46.96;MQ0=24;MQRankSum=-6.853;QD=4.48;ReadPosRankSum=1.533;VQSLOD=-0.6791;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:61.24:0,61,346	0/1:9,0:8:30.76:31,0,36	0/0:23,0:5:6.82:0,7,49	0/0:31,0:9:7.49:0,7,82	0/1:23,0:22:12.56:150,0,13	1/1:15,1:15:15.39:88,15,0	0/1:15,0:15:13.43:13,0,76	1/1:36,0:34:23.40:330,23,0	0/1:16,0:16:50.83:126,0,51	0/1:23,1:23:53.38:80,0,53	0/1:17,0:17:17.25:17,0,53	0/1:24,0:23:19.14:19,0,101	0/0:14,0:14:12.17:0,12,151	0/0:15,0:13:16.02:0,16,101	1/1:23,0:23:16.09:230,16,0	0/1:16,0:16:34.09:126,0,34	0/0:29,0:25:49.92:0,50,358	0/0:8,0:8:22.92:0,23,158	0/1:24,0:20:20.67:100,0,21	0/1:22,0:21:32.87:33,0,157	0/1:19,0:19:34.94:35,0,64	0/1:17,1:17:45.45:70,0,45	0/1:20,0:20:38.72:39,0,48	0/1:7,0:7:32.17:32,0,37	0/1:25,0:25:0.51:241,0,1	0/1:25,1:25:66.69:129,0,67	0/0:19,0:18:20.25:0,20,230	0/1:7,0:6:7.85:20,0,8
chr10	95701520	.	AAC	A	3965.63	PASS	AB=0.994;AC=42;AF=0.750;AN=56;BaseQRankSum=-7.922;DP=552;FS=7.916;HRun=0;HaplotypeScore=138.5714;InbreedingCoeff=-0.1823;MQ=46.45;MQ0=25;MQRankSum=0.487;QD=7.26;ReadPosRankSum=-2.333;VQSLOD=2.2885;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:99:111,0,122	0/1:9,0:8:2.65:14,0,3	1/1:23,0:5:4.79:26,5,0	0/1:32,0:9:22.93:23,0,23	0/1:23,0:22:33.55:82,0,34	1/1:17,0:16:17.25:130,17,0	1/1:14,0:14:13.31:121,13,0	0/1:37,0:35:99:162,0,119	0/1:16,0:16:30.59:107,0,31	1/1:24,0:23:4.29:369,4,0	1/1:14,1:15:3.61:105,4,0	1/1:21,1:21:30.39:187,30,0	0/1:13,1:14:8.21:124,0,8	1/1:14,1:13:25.76:170,26,0	0/1:23,0:23:52.56:60,0,53	0/1:15,0:15:5.86:7,0,6	0/1:29,0:25:30.60:134,0,31	1/1:9,0:9:7.85:123,8,0	1/1:27,0:21:4.53:269,5,0	0/1:20,0:19:63.68:109,0,64	1/1:19,0:19:22.93:227,23,0	1/1:16,2:17:33.72:279,34,0	1/1:17,0:17:22.65:149,23,0	1/1:7,0:7:16.22:106,16,0	0/1:25,0:25:19.33:103,0,19	1/1:27,0:26:24.19:467,24,0	1/1:18,0:17:31.50:203,32,0	0/0:6,0:5:4.71:0,5,18
chr10	95701521	.	AC	A	4438.56	PASS	AB=0.982;AC=51;AF=0.911;AN=56;BaseQRankSum=-1.221;DP=549;FS=22.800;HRun=1;HaplotypeScore=128.8141;InbreedingCoeff=-0.0142;MQ=45.00;MQ0=25;MQRankSum=-1.425;QD=8.08;ReadPosRankSum=2.539;VQSLOD=0.8610;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:21.50:171,0,21	1/1:9,0:8:9.09:53,9,0	1/1:20,4:4:4.80:27,5,0	0/1:28,3:8:7.85:32,0,8	1/1:21,1:21:29.66:205,30,0	1/1:17,0:16:15.54:85,16,0	1/1:14,0:14:25.13:132,25,0	0/1:37,0:35:23.83:211,0,24	0/1:16,0:16:0.64:151,0,1	1/1:23,1:23:20.30:255,20,0	1/1:16,0:16:11.33:121,11,0	1/1:22,0:21:36.02:257,36,0	1/1:14,0:14:11.76:127,12,0	1/1:15,0:13:29.74:177,30,0	1/1:23,0:23:28.85:265,29,0	1/1:15,0:15:27.35:131,27,0	1/1:28,0:24:20.06:193,20,0	1/1:9,0:9:22.50:158,23,0	1/1:26,0:20:14.48:175,14,0	0/1:19,0:18:24.37:111,0,24	1/1:19,0:19:18.83:142,19,0	1/1:18,0:17:35.74:227,36,0	1/1:17,0:17:21.74:104,22,0	1/1:8,0:8:14.21:65,14,0	1/1:24,1:25:40.23:321,40,0	1/1:27,0:26:41.07:342,41,0	1/1:17,0:16:30.57:198,31,0	1/1:5,0:4:0.80:2,1,0
chr10	95701522	.	CA	C	1603.54	PASS	AB=0.793;AC=26;AF=0.464;AN=56;BaseQRankSum=-10.083;DP=556;FS=2.502;HRun=13;HaplotypeScore=140.0414;InbreedingCoeff=0.4880;MQ=46.17;MQ0=25;MQRankSum=3.927;QD=5.26;ReadPosRankSum=-4.889;VQSLOD=0.7424;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:32:37.72:0,38,200	0/0:9,0:8:15.40:0,15,73	0/0:25,1:5:2.97:0,3,20	0/1:28,1:8:1.08:1,0,20	0/0:22,0:21:22.16:0,22,147	1/1:5,11:16:11.72:71,12,0	1/1:13,1:14:4.72:49,5,0	0/0:37,0:35:64.01:0,64,313	0/0:17,0:17:22.80:0,23,103	0/1:10,14:24:6.48:238,0,6	1/1:14,2:16:18:106,18,0	1/1:20,2:21:18.02:113,18,0	0/1:13,1:14:23.42:50,0,23	1/1:14,1:13:7.84:72,8,0	0/0:21,0:23:16.44:0,16,159	0/0:15,0:15:27.66:0,28,109	0/0:30,0:26:18.21:0,18,110	0/0:9,0:9:5.43:0,5,25	1/1:13,12:19:2.57:151,3,0	0/1:16,3:18:38.75:70,0,39	0/1:14,5:19:13.90:121,0,14	1/1:13,5:18:24.95:135,25,0	0/1:4,13:17:5.73:101,0,6	1/1:7,1:8:8.26:51,8,0	0/0:26,0:26:6.54:0,7,108	1/1:17,9:26:44.19:307,44,0	1/1:14,3:17:18.33:161,18,0	0/0:5,0:4:5.86:0,6,35
chr10	95701528	.	A	AAC	1495.16	PASS	AB=0.837;AC=8;AF=0.143;AN=56;BaseQRankSum=3.622;DP=591;FS=18.772;HRun=0;HaplotypeScore=159.2704;InbreedingCoeff=-0.1781;MQ=49.24;MQ0=25;MQRankSum=-7.757;QD=7.83;ReadPosRankSum=1.591;VQSLOD=2.2699;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:55.76:56,0,221	0/1:9,2:10:26.69:110,0,27	0/0:27,0:5:2.13:0,2,22	0/0:36,0:11:12.52:0,13,75	0/1:15,7:21:34.10:210,0,34	0/0:19,0:18:23.72:0,24,191	0/0:14,0:14:41.61:0,42,356	0/1:25,15:38:30.92:537,0,31	0/1:13,3:16:93.57:124,0,94	0/0:25,0:24:72.02:0,72,683	0/0:15,0:15:35.82:0,36,286	0/0:26,0:25:65.57:0,66,605	0/0:14,0:14:41.95:0,42,431	0/0:15,0:14:35.60:0,36,309	0/1:21,5:26:42.08:285,0,42	0/1:13,3:16:24.58:124,0,25	0/0:31,0:27:57.12:0,57,440	0/0:10,0:10:26.97:0,27,188	0/0:28,0:22:56.99:0,57,480	0/0:20,0:19:46.23:0,46,450	0/0:19,0:19:38.52:0,39,345	0/0:19,0:18:41.89:0,42,346	0/0:18,0:18:34.79:0,35,264	0/0:10,0:10:26.98:0,27,258	0/1:21,5:26:99:186,0,133	0/0:28,0:27:75.70:0,76,654	0/0:20,0:19:53.33:0,53,489	0/0:6,0:5:8.04:0,8,37
chr10	95701536	.	CAA	C	1840.09	PASS	AB=0.726;AC=10;AF=0.179;AN=56;BaseQRankSum=3.229;DP=563;FS=19.817;HRun=13;HaplotypeScore=141.5149;InbreedingCoeff=-0.2046;MQ=52.06;MQ0=18;MQRankSum=-5.796;QD=8.68;ReadPosRankSum=2.872;VQSLOD=0.5681;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:74.25:0,74,809	0/1:4,5:8:59.69:99,0,60	0/1:25,0:5:10.58:11,0,11	0/1:32,1:11:19.28:19,0,45	0/1:12,9:20:99:150,0,118	0/0:18,0:17:15.76:0,16,156	0/0:12,0:12:26.12:0,26,265	0/1:22,14:35:60.45:340,0,60	0/1:5,10:16:40.75:249,0,41	0/0:24,0:23:43.36:0,43,579	0/0:14,0:14:18.42:0,18,187	0/0:26,0:26:45.92:0,46,569	0/0:16,0:16:26.79:0,27,281	0/0:16,0:15:21.69:0,22,258	0/1:14,11:25:99:381,0,125	0/1:4,11:15:30.82:240,0,31	0/0:30,0:26:27.82:0,28,223	0/0:11,0:11:7.37:0,7,65	0/0:22,0:18:37.62:0,38,410	0/0:17,0:16:24.31:0,24,333	0/0:18,0:18:28.89:0,29,305	0/0:17,0:16:28.63:0,29,258	0/0:19,0:19:35.59:0,36,357	0/0:11,0:11:28.03:0,28,379	0/1:7,20:27:45.95:474,0,46	0/0:24,0:24:50.09:0,50,456	0/0:19,0:20:40.97:0,41,435	0/1:3,1:3:20.88:21,0,37
chr10	95702642	.	CTG	C	71.05	PASS	AB=0.756;AC=3;AF=0.054;AN=56;BaseQRankSum=6.061;DP=867;FS=2.338;HRun=0;HaplotypeScore=171.2862;InbreedingCoeff=-0.0638;MQ=60.19;MQ0=12;MQRankSum=-4.208;QD=1.13;ReadPosRankSum=-3.441;VQSLOD=1.4548;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:96.27:0,96,1564	0/1:6,3:9:19.90:20,0,157	0/0:47,0:18:23.19:0,23,404	0/0:46,0:20:29.29:0,29,369	0/0:21,13:34:39.87:0,40,592	0/0:24,0:24:57.16:0,57,926	0/0:22,0:22:54.11:0,54,788	0/0:46,0:45:99:0,120,1573	0/0:25,7:32:3.06:0,3,565	0/0:41,0:41:96.32:0,96,1632	0/0:22,0:22:63.17:0,63,996	0/0:44,0:44:99:0,108,1808	0/0:28,0:28:81.17:0,81,1285	0/0:24,0:23:48.13:0,48,771	0/0:23,6:28:41.47:0,41,579	0/1:23,10:33:95.03:95,0,717	0/0:31,0:31:78.23:0,78,1286	0/0:31,0:31:48.62:0,49,1295	0/0:26,0:24:60.07:0,60,874	0/0:33,0:33:96.31:0,96,1626	0/0:35,0:35:87.26:0,87,1439	0/0:21,0:21:57.20:0,57,986	0/0:24,0:24:72.22:0,72,1184	0/0:53,0:53:99:0,125,2253	0/1:14,7:21:55.48:55,0,370	0/0:35,0:35:99:0,102,1613	0/0:33,0:33:87.26:0,87,1427	0/0:5,0:5:15.03:0,15,230
chr10	95702662	.	CTG	C	1904.20	PASS	AB=0.775;AC=8;AF=0.143;AN=56;BaseQRankSum=8.420;DP=892;FS=0.000;HRun=0;HaplotypeScore=184.8615;InbreedingCoeff=0.1492;MQ=55.09;MQ0=16;MQRankSum=-4.089;QD=9.38;ReadPosRankSum=-2.225;VQSLOD=2.5932;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,99,1712	0/1:6,3:9:15.89:122,0,16	0/1:42,0:7:9.62:10,0,67	0/0:53,0:18:33.55:0,34,338	1/1:25,9:34:19.54:281,20,0	0/0:23,0:23:60.21:0,60,1028	0/0:21,0:20:48.14:0,48,766	0/0:46,0:45:99:0,117,1483	0/1:19,14:33:12.45:402,0,12	0/0:39,0:39:90.28:0,90,1444	0/0:29,0:29:66.23:0,66,1128	0/0:46,0:46:99:0,117,1935	0/0:30,0:30:84.21:0,84,1333	0/0:25,0:24:39.13:0,39,674	0/1:19,12:30:17.33:386,0,17	0/1:19,10:29:75.14:529,0,75	0/0:35,0:35:96.29:0,96,1602	0/0:27,0:27:72.22:0,72,1206	0/0:25,0:20:48.16:0,48,806	0/0:36,0:36:99:0,102,1565	0/0:40,0:40:99:0,108,1682	0/0:21,0:21:60.17:0,60,982	0/0:25,0:25:72.20:0,72,1178	0/0:52,0:52:99:0,138,2292	0/1:16,9:25:32.38:316,0,32	0/0:38,0:38:99:0,105,1722	0/0:32,0:32:78.24:0,78,1317	0/0:5,0:5:15.03:0,15,205
chr10	95702672	.	C	CCCTGTG	5066.26	PASS	AB=0.715;AC=8;AF=0.143;AN=56;BaseQRankSum=11.437;DP=909;FS=9.520;HRun=0;HaplotypeScore=251.0854;InbreedingCoeff=-0.1669;MQ=55.12;MQ0=18;MQRankSum=-10.522;QD=22.42;ReadPosRankSum=-7.752;VQSLOD=1.8679;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,118,2723	0/1:4,5:9:99:167,0,172	0/0:46,0:8:17.97:0,18,322	0/0:53,0:24:44.98:0,45,827	0/1:20,18:38:22.55:23,0,182	0/0:24,0:24:66.13:0,66,1580	0/0:22,0:21:56.84:0,57,1321	0/1:45,11:53:99:2401,0,320	0/1:20,13:33:99:483,0,485	0/0:31,0:31:93.31:0,93,2201	0/0:28,0:28:72.72:0,73,1663	0/0:49,0:49:99:0,135,3206	0/0:32,0:32:90.25:0,90,2079	0/0:24,0:23:39.13:0,39,968	0/1:18,14:31:99:444,0,472	0/1:16,15:31:99:1025,0,607	0/0:34,0:34:96.31:0,96,2373	0/0:27,0:27:79.78:0,80,1812	0/0:26,0:21:57.19:0,57,1377	0/0:34,0:34:99:0,99,2212	0/0:38,0:38:99:0,108,2602	0/0:21,0:21:63.19:0,63,1354	0/0:27,0:27:75.19:0,75,1639	0/0:54,0:54:99:0,147,3428	0/1:12,11:23:99:429,0,341	0/0:38,0:38:99:0,114,2675	0/0:29,0:29:78.27:0,78,1884	0/1:3,1:4:95.33:95,0,151
chr10	95702716	.	T	TTC	5716.42	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-2.207;DP=822;FS=7.079;HRun=0;HaplotypeScore=154.1679;InbreedingCoeff=0.9696;MQ=62.90;MQ0=2;MQRankSum=-5.010;QD=30.25;ReadPosRankSum=-2.952;VQSLOD=5.1879;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,120,1507	1/1:0,8:8:20.54:277,21,0	0/0:35,0:30:50.08:0,50,764	0/0:42,1:38:55.61:0,56,701	1/1:5,26:31:56.77:892,57,0	0/0:19,0:19:45.07:0,45,543	0/0:30,0:28:81.17:0,81,991	1/1:7,28:36:84.26:1358,84,0	1/1:11,24:35:62.51:922,63,0	0/0:21,0:21:54.17:0,54,682	0/0:28,0:28:72.20:0,72,907	0/0:43,0:43:99:0,108,1361	0/0:30,0:30:72.16:0,72,907	0/0:16,0:16:45.06:0,45,540	1/1:6,20:26:53.39:768,53,0	1/1:8,15:23:32.60:491,33,0	0/0:36,0:36:80.93:0,81,1042	0/0:29,0:29:72.23:0,72,923	0/0:25,0:25:57.05:0,57,681	0/0:33,0:33:78.23:0,78,975	0/0:45,0:45:99:0,114,1437	0/0:28,0:28:78.01:0,78,957	0/0:20,0:20:54.12:0,54,664	0/0:49,0:49:99:0,120,1476	1/1:4,23:27:62.68:959,63,0	0/0:26,0:26:69.22:0,69,875	0/0:25,0:25:57.13:0,57,703	1/1:0,1:1:3.01:51,3,0
chr10	95707367	.	AT	A	3195.25	PASS	AB=0.929;AC=17;AF=0.304;AN=56;BaseQRankSum=12.112;DP=494;FS=27.139;HRun=4;HaplotypeScore=93.9159;InbreedingCoeff=0.9009;MQ=62.79;MQ0=21;MQRankSum=-8.178;QD=20.75;ReadPosRankSum=-2.872;VQSLOD=1.4455;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:93.20:0,93,1243	1/1:2,8:10:24.07:286,24,0	0/1:24,2:12:15.01:15,0,144	0/0:14,1:7:14.78:0,15,133	1/1:0,27:27:66.08:750,66,0	0/0:27,0:26:69.23:0,69,961	0/0:19,0:17:48.05:0,48,606	1/1:16,3:17:44.13:345,44,0	1/1:2,13:15:25.39:448,25,0	0/0:22,0:22:63.17:0,63,854	0/0:13,0:13:33.11:0,33,461	0/0:17,0:17:46.93:0,47,611	0/0:12,0:12:36.12:0,36,503	0/0:11,0:11:27.09:0,27,377	1/1:1,10:11:13.36:305,13,0	1/1:2,11:11:33.03:363,33,0	0/0:33,0:29:72.03:0,72,979	0/0:18,0:16:48.14:0,48,653	0/0:22,0:20:60.13:0,60,782	0/0:14,0:14:39.06:0,39,505	0/0:4,0:3:9.03:0,9,126	0/0:13,0:13:39.04:0,39,518	0/0:9,0:9:24:0,24,336	0/0:14,0:12:32.92:0,33,406	1/1:1,24:25:57.18:684,57,0	0/0:16,0:16:48.14:0,48,638	0/0:26,0:26:69.22:0,69,949	1/1:4,4:8:23.63:206,24,0
chr10	95707377	.	A	AAG	1006.65	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=5.901;DP=517;FS=29.205;HRun=0;HaplotypeScore=121.9666;InbreedingCoeff=0.7099;MQ=63.45;MQ0=7;MQRankSum=-6.742;QD=16.78;ReadPosRankSum=-5.519;VQSLOD=1.2227;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,104,1402	0/0:8,0:8:23.98:0,24,223	0/0:33,0:12:20.04:0,20,194	0/0:16,0:7:15.06:0,15,163	0/0:27,0:27:23.71:0,24,465	0/0:28,0:27:75.24:0,75,1042	0/0:16,0:16:48.16:0,48,697	1/1:6,19:25:68.37:777,68,0	0/1:14,0:14:2.12:2,0,264	0/0:24,0:24:69.20:0,69,952	0/0:16,0:16:41.15:0,41,535	0/0:15,0:15:42.07:0,42,574	0/0:15,0:15:45.13:0,45,609	0/0:10,0:10:27.09:0,27,388	0/0:12,0:12:8.48:0,8,214	0/1:12,0:10:0.13:0,0,182	0/0:28,0:27:79.74:0,80,1086	0/0:21,0:20:45.38:0,45,649	0/0:22,0:22:60.18:0,60,822	0/0:15,0:15:44.98:0,45,568	0/0:4,0:3:9.03:0,9,132	0/0:18,0:18:48.14:0,48,638	0/0:13,0:13:39.05:0,39,477	0/0:13,0:12:33.10:0,33,467	0/0:22,0:21:24.69:0,25,501	0/0:21,0:21:63.18:0,63,852	0/0:24,0:24:72.24:0,72,1040	1/1:6,3:9:26.95:350,27,0
chr10	95707411	.	AAGGAGAAGAGGAGGAGGAGGAAGAG	A	6691.65	PASS	AB=0.905;AC=13;AF=0.232;AN=56;BaseQRankSum=12.753;DP=534;FS=20.499;HRun=0;HaplotypeScore=326.4533;InbreedingCoeff=0.6359;MQ=51.39;MQ0=13;MQRankSum=-11.710;QD=68.28;ReadPosRankSum=-0.625;VQSLOD=2.9931;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,133,11378	1/1:3,4:6:18.06:850,18,0	0/0:25,0:8:12.51:0,13,702	0/0:31,0:8:20.75:0,21,1052	1/1:15,8:23:13.32:1365,13,0	0/0:22,0:20:57.20:0,57,4755	0/0:19,0:18:51.17:0,51,4071	0/1:12,0:13:37.20:37,0,225	0/1:11,0:11:7.07:528,0,7	0/0:26,0:26:75.26:0,75,6605	0/0:14,0:13:39.13:0,39,4068	0/0:19,0:19:57.20:0,57,4766	0/0:22,0:22:66.21:0,66,5719	0/0:11,0:11:33.11:0,33,3042	1/1:6,4:10:30.10:1022,30,0	0/1:8,3:9:93.89:745,0,94	0/0:29,0:29:87.30:0,87,6964	0/0:25,0:25:75.26:0,75,7208	0/0:22,0:20:57.19:0,57,3517	0/0:12,0:12:36.12:0,36,2554	0/0:6,0:6:18.06:0,18,1521	0/0:18,0:18:51.16:0,51,5078	0/0:16,0:16:48.16:0,48,4886	0/0:25,0:24:66.20:0,66,4759	1/1:8,7:15:3.26:1390,3,0	0/0:24,0:24:69.24:0,69,6770	0/0:24,0:24:69.24:0,69,6429	1/1:8,0:8:4.53:754,5,0
chr10	95707412	.	AG	A	182.98	PASS	AB=0.801;AC=12;AF=0.214;AN=56;BaseQRankSum=11.074;DP=531;FS=6.836;HRun=2;HaplotypeScore=111.8275;InbreedingCoeff=0.5575;MQ=51.47;MQ0=13;MQRankSum=-9.823;QD=1.89;ReadPosRankSum=2.336;VQSLOD=-0.6527;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,120,1749	1/1:6,1:6:8.38:34,8,0	0/0:24,0:8:12.02:0,12,175	0/0:31,0:8:16.43:0,16,197	1/1:17,6:23:24.49:125,24,0	0/0:23,0:21:60.19:0,60,866	0/0:19,0:18:48.16:0,48,719	1/1:12,0:12:4.14:15,4,0	0/1:7,3:10:13.91:48,0,14	0/0:26,0:26:72.24:0,72,1079	0/0:14,0:13:39.13:0,39,584	0/0:20,0:20:60.19:0,60,876	0/0:21,0:21:63.21:0,63,943	0/0:11,0:11:33.11:0,33,494	0/1:8,2:10:7.16:40,0,7	0/1:8,2:8:7.56:13,0,8	0/0:29,0:29:83.65:0,84,1215	0/0:25,0:25:75.25:0,75,1123	0/0:22,0:20:57.17:0,57,813	0/0:12,0:12:33.11:0,33,493	0/0:6,0:6:18.06:0,18,269	0/0:17,0:17:48.16:0,48,718	0/0:16,0:16:48.15:0,48,697	0/0:25,0:24:63:0,63,909	1/1:14,1:15:9.70:58,10,0	0/0:24,0:24:69.23:0,69,1034	0/0:24,0:24:69.23:0,69,1027	0/1:7,0:10:9.78:10,0,21
chr10	95707416	.	G	GGACA	706.92	PASS	AB=0.867;AC=8;AF=0.143;AN=56;BaseQRankSum=6.850;DP=507;FS=1.757;HRun=0;HaplotypeScore=130.8579;InbreedingCoeff=-0.1455;MQ=53.26;MQ0=14;MQRankSum=-7.117;QD=9.18;ReadPosRankSum=-4.267;VQSLOD=1.8247;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,115,2346	0/1:6,1:6:40.18:40,0,86	0/0:22,0:5:12.03:0,12,216	0/0:35,0:10:23.87:0,24,424	0/1:12,6:18:94.02:312,0,94	0/0:22,0:20:57.20:0,57,1187	0/0:18,0:17:48.16:0,48,1006	0/1:3,0:3:11.07:54,0,11	0/1:5,3:8:18.21:156,0,18	0/0:24,0:24:69.22:0,69,1378	0/0:15,0:14:39.13:0,39,817	0/0:19,0:19:57.20:0,57,1190	0/0:21,0:21:63.22:0,63,1317	0/0:11,0:11:33.11:0,33,691	0/1:9,2:11:66.79:110,0,67	0/1:6,2:8:37.78:38,0,81	0/0:28,0:28:80.95:0,81,1630	0/0:27,0:27:81.24:0,81,1643	0/0:21,0:19:57.18:0,57,1136	0/0:11,0:11:33.11:0,33,692	0/0:6,0:6:18.06:0,18,377	0/0:17,0:17:48.16:0,48,1006	0/0:17,0:17:48.16:0,48,1002	0/0:24,0:24:62.35:0,62,1175	0/1:11,1:12:99:111,0,141	0/0:23,0:23:69.24:0,69,1447	0/0:24,0:24:66.23:0,66,1369	0/1:9,0:9:21.96:22,0,96
chr10	95707418	.	A	AAAG	1700.33	PASS	AB=0.939;AC=12;AF=0.214;AN=56;BaseQRankSum=11.656;DP=525;FS=14.412;HRun=0;HaplotypeScore=126.2907;InbreedingCoeff=0.5449;MQ=54.13;MQ0=15;MQRankSum=-11.603;QD=19.10;ReadPosRankSum=-5.754;VQSLOD=0.8027;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,121,2042	0/1:7,0:6:56.15:56,0,61	0/0:25,0:6:12.04:0,12,205	0/0:35,0:10:16.94:0,17,368	1/1:15,4:19:23.30:376,23,0	0/0:22,0:20:57.17:0,57,992	0/0:18,0:17:48.08:0,48,745	0/1:5,0:5:9.11:32,0,9	1/1:5,3:9:25.02:269,25,0	0/0:22,0:22:61.44:0,61,1084	0/0:16,0:15:42.12:0,42,714	0/0:21,0:21:57.15:0,57,962	0/0:21,0:21:63.10:0,63,1034	0/0:12,0:12:33.09:0,33,551	0/1:13,2:15:4.92:379,0,5	1/1:7,3:10:0.48:246,0,0	0/0:30,0:30:77.03:0,77,1245	0/0:28,0:28:84.18:0,84,1429	0/0:21,0:19:57.15:0,57,924	0/0:12,0:12:36.07:0,36,539	0/0:7,0:7:18.05:0,18,304	0/0:16,0:16:48.15:0,48,845	0/0:17,0:17:51.14:0,51,884	0/0:24,0:23:53.63:0,54,888	0/1:12,2:14:16.17:318,0,16	0/0:23,0:23:69.20:0,69,1170	0/0:24,0:24:69.13:0,69,1174	1/1:4,5:9:11.10:189,11,0
chr10	95707821	.	T	TTA	3665.53	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=4.140;DP=299;FS=6.885;HRun=0;HaplotypeScore=39.2938;InbreedingCoeff=0.7383;MQ=80.00;MQ0=5;MQRankSum=-2.273;QD=40.28;ReadPosRankSum=-0.998;VQSLOD=4.4589;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.15:0,48,679	1/1:0,2:2:6.02:113,6,0	0/1:15,0:7:10.04:10,0,74	0/0:29,0:14:1.91:0,2,176	1/1:0,10:10:27.09:506,27,0	0/0:16,0:16:45.14:0,45,631	0/0:3,0:3:9.03:0,9,130	1/1:0,23:24:72.18:1233,72,0	1/1:0,3:3:6.02:113,6,0	0/0:9,0:9:27.09:0,27,391	0/0:4,0:4:12.04:0,12,175	0/0:4,0:4:12.03:0,12,158	0/0:3,0:3:9.03:0,9,122	0/0:9,0:9:27.06:0,27,371	1/1:0,7:7:12.04:227,12,0	1/1:0,6:6:18.06:339,18,0	0/0:25,0:24:69.22:0,69,985	0/0:25,0:25:75.24:0,75,1074	0/0:24,0:23:69.22:0,69,985	0/0:6,0:6:18.05:0,18,245	0/0:1,0:1:3.01:0,3,44	0/0:1,0:1:3.01:0,3,44	0/0:2,0:2:6.02:0,6,87	0/0:3,0:3:6.01:0,6,88	1/1:0,9:9:21.07:391,21,0	0/0:17,0:17:51.15:0,51,696	0/0:7,0:7:21.07:0,21,305	1/1:0,14:14:39.13:732,39,0
chr10	95707981	.	AAAC	A	2420.11	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=9.395;DP=534;FS=5.969;HRun=0;HaplotypeScore=83.9360;InbreedingCoeff=0.8425;MQ=57.76;MQ0=41;MQRankSum=-5.078;QD=11.36;ReadPosRankSum=-2.126;VQSLOD=2.3841;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:37:66.26:0,66,610	1/1:6,0:6:10.67:136,11,0	0/1:52,0:12:8.84:9,0,68	0/1:40,0:10:7.27:7,0,32	1/1:17,6:22:59.54:652,60,0	0/0:19,0:19:52.82:0,53,650	0/0:14,0:14:24.12:0,24,466	1/1:29,0:29:69.25:591,69,0	1/1:12,0:11:26.29:228,26,0	0/0:16,0:16:28.62:0,29,626	0/0:11,0:8:17.88:0,18,251	0/0:15,0:15:43.81:0,44,512	0/0:8,0:8:17.99:0,18,207	0/0:11,0:10:26.79:0,27,386	1/1:8,0:8:15.04:169,15,0	1/1:12,0:12:29.81:334,30,0	0/0:28,0:25:36.67:0,37,271	0/0:27,0:24:43.13:0,43,386	0/0:22,0:16:41.12:0,41,543	0/0:17,0:16:38.28:0,38,511	0/0:18,0:18:25:0,25,489	0/0:14,0:14:38.14:0,38,520	0/0:7,0:6:18.02:0,18,259	0/0:20,0:20:45.01:0,45,704	1/1:16,0:14:33.97:311,34,0	0/0:21,0:19:35.18:0,35,597	0/0:13,0:13:39.06:0,39,504	1/1:15,0:14:22.24:189,22,0
chr10	95707984	.	CA	C	2141.90	PASS	AB=0.977;AC=18;AF=0.321;AN=56;BaseQRankSum=10.269;DP=538;FS=8.147;HRun=14;HaplotypeScore=74.5935;InbreedingCoeff=0.8255;MQ=59.59;MQ0=32;MQRankSum=-3.651;QD=9.92;ReadPosRankSum=0.046;VQSLOD=2.6883;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:74.97:0,75,762	1/1:1,5:6:15.02:146,15,0	0/1:54,0:13:36.92:37,0,45	0/1:39,2:11:26.56:27,0,42	1/1:9,15:23:61.34:521,61,0	0/0:18,0:18:48.13:0,48,568	0/0:14,0:14:35.99:0,36,410	1/1:4,23:27:44.38:546,44,0	1/1:3,10:13:20.63:187,21,0	0/0:16,0:16:42.08:0,42,515	0/0:8,0:7:19.68:0,20,205	0/0:17,0:17:43.10:0,43,581	0/0:8,0:8:17.97:0,18,197	0/0:11,0:10:24.07:0,24,292	1/1:0,9:9:14.60:148,15,0	1/1:0,12:12:29.96:272,30,0	0/0:29,0:27:45.05:0,45,469	0/0:27,0:25:47.40:0,47,417	0/0:22,0:16:42.09:0,42,482	0/0:17,0:16:40.60:0,41,415	0/0:21,0:21:46.82:0,47,535	0/0:14,0:14:33.09:0,33,390	0/0:7,0:6:17.88:0,18,192	0/0:21,0:21:48.15:0,48,600	1/1:7,8:13:27.02:264,27,0	0/0:19,0:19:41.94:0,42,547	0/0:14,0:14:39.12:0,39,469	1/1:3,12:14:20.97:203,21,0
chr10	95708484	.	T	TA	801.87	PASS	AB=0.836;AC=9;AF=0.161;AN=56;BaseQRankSum=-7.985;DP=612;FS=7.374;HRun=14;HaplotypeScore=78.2325;InbreedingCoeff=0.2562;MQ=77.49;MQ0=0;MQRankSum=-0.613;QD=5.01;ReadPosRankSum=1.507;VQSLOD=2.1831;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,20:30:22.56:311,23,0	0/0:10,0:10:23.62:0,24,152	0/0:24,0:22:3.77:0,4,53	0/0:23,0:19:22.92:0,23,141	0/0:27,0:27:24.01:0,24,265	0/1:18,2:21:0.40:0,0,241	0/0:14,0:14:28.58:0,29,176	0/0:32,1:34:18.67:0,19,233	0/0:18,0:21:39.44:0,39,243	0/0:25,0:25:47.13:0,47,303	0/0:15,0:16:28.58:0,29,179	0/0:18,0:21:37.33:0,37,235	0/0:17,0:18:49.27:0,49,309	0/0:19,0:22:43.35:0,43,274	0/0:14,0:15:15.02:0,15,193	0/0:20,0:24:48.11:0,48,290	0/1:6,17:24:20.24:327,0,20	1/1:9,13:22:0.46:251,0,0	0/1:15,2:17:17.41:17,0,152	0/1:20,2:24:13.28:13,0,162	0/0:12,0:13:28.55:0,29,177	0/0:23,0:23:47.01:0,47,305	0/0:22,0:25:57.17:0,57,356	0/0:24,0:24:50.17:0,50,327	0/0:29,0:29:67.72:0,68,437	0/0:26,1:29:18.46:0,18,234	0/1:18,3:22:15.26:15,0,160	0/0:12,0:13:22.67:0,23,140
chr10	95709747	.	A	AG	5690.08	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-15.477;DP=715;FS=0.705;HRun=5;HaplotypeScore=137.8192;InbreedingCoeff=0.9993;MQ=78.53;MQ0=0;MQRankSum=-3.072;QD=34.49;ReadPosRankSum=0.332;VQSLOD=2.5578;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,129,1360	1/1:0,9:9:27.09:355,27,0	0/0:22,0:22:49:0,49,518	0/0:18,0:19:45.09:0,45,467	1/1:2,23:25:54.18:708,54,0	0/0:20,0:19:48.58:0,49,495	0/0:31,0:31:80.53:0,81,801	1/1:2,15:17:39.09:482,39,0	1/1:3,25:28:75.24:982,75,0	0/0:19,0:18:51.08:0,51,497	0/0:12,0:12:27.53:0,28,279	0/0:40,0:40:99:0,114,1165	0/0:21,0:21:55.93:0,56,558	0/0:29,0:29:78.14:0,78,790	1/1:2,23:25:66.21:869,66,0	1/1:2,29:31:89.10:1150,89,0	0/0:36,0:36:96.24:0,96,1032	0/0:23,0:23:63.16:0,63,677	0/0:29,0:29:77.43:0,77,754	0/0:17,0:17:45.10:0,45,465	0/0:47,0:47:99:0,129,1286	0/0:19,0:19:46.65:0,47,460	0/0:16,0:16:42.10:0,42,432	0/0:38,0:38:99:0,102,1047	1/1:1,21:22:63.20:829,63,0	0/0:30,0:30:81.16:0,81,809	0/0:35,0:35:93.20:0,93,951	1/1:0,8:8:24.08:316,24,0
chr10	95710149	.	A	AG	314.02	PASS	AB=0.802;AC=6;AF=0.107;AN=56;BaseQRankSum=1.513;DP=494;FS=6.880;HRun=0;HaplotypeScore=82.7530;InbreedingCoeff=0.2387;MQ=52.66;MQ0=16;MQRankSum=2.628;QD=4.76;ReadPosRankSum=0.391;VQSLOD=2.7432;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:42.15:0,42,352	1/1:5,0:5:10.28:91,10,0	0/0:36,0:13:6.84:0,7,145	0/0:40,0:11:2.63:0,3,32	0/1:19,1:20:6.17:203,0,6	0/0:20,0:20:38.73:0,39,302	0/0:11,0:11:29.83:0,30,259	0/0:33,0:31:59.98:0,60,409	0/1:12,0:12:11.06:92,0,11	0/0:23,0:22:54.23:0,54,411	0/0:20,0:20:50.59:0,51,368	0/0:13,0:13:28.37:0,28,200	0/0:9,0:9:17.30:0,17,118	0/0:10,0:10:26.67:0,27,200	0/0:1,8:9:2.92:0,3,17	0/1:4,1:13:14.55:15,0,15	0/0:20,0:18:43.93:0,44,296	0/0:14,0:14:24.89:0,25,172	0/0:18,0:18:43.87:0,44,325	0/0:28,0:28:49.36:0,49,387	0/0:5,0:4:11.77:0,12,77	0/0:12,0:12:31.84:0,32,227	0/0:16,0:15:32.48:0,32,242	0/0:6,0:6:8.81:0,9,59	0/1:8,7:16:37.68:38,0,52	0/0:28,0:27:70.66:0,71,483	0/0:24,0:23:57.58:0,58,469	0/0:15,0:15:44.24:0,44,337
chr10	95710319	.	CTCTCTCTCTCTCTT	C	2576.47	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=2.659;DP=607;FS=7.415;HRun=0;HaplotypeScore=243.2464;InbreedingCoeff=0.5376;MQ=57.82;MQ0=19;MQRankSum=-3.859;QD=14.31;ReadPosRankSum=-1.239;VQSLOD=1.4494;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:24.71:0,25,1555	1/1:6,2:8:14.98:333,15,0	0/0:34,0:15:2.89:0,3,148	0/0:59,0:29:18.71:0,19,643	1/1:11,2:13:18.93:454,19,0	0/0:15,0:15:26.84:0,27,990	0/0:30,0:30:54.12:0,54,2341	0/1:34,0:32:62.75:63,0,684	1/1:12,0:12:26.95:465,27,0	0/0:26,0:25:66.21:0,66,2908	0/1:16,0:16:16.42:16,0,842	0/0:24,0:24:51.13:0,51,2553	0/0:13,0:13:11.36:0,11,765	0/0:18,0:18:30.06:0,30,1532	1/1:11,4:11:24.08:466,24,0	1/1:6,6:12:29.87:326,30,0	0/1:18,0:18:33.63:34,0,883	0/1:22,0:21:12.98:13,0,842	0/0:23,0:22:53.97:0,54,2273	0/1:18,0:18:13.67:14,0,998	0/0:31,0:31:31.98:0,32,1499	0/0:28,0:28:11.05:0,11,1584	0/0:20,0:20:33.52:0,34,1379	0/0:17,0:17:30.08:0,30,1627	1/1:10,2:12:24.08:586,24,0	0/0:27,0:27:57.98:0,58,2749	0/0:20,0:20:24.08:0,24,1306	0/0:12,0:12:9.27:0,9,866
chr10	95710333	.	T	TTCTC	8248.11	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-8.909;DP=645;FS=6.941;HRun=0;HaplotypeScore=153.8982;InbreedingCoeff=0.7847;MQ=52.38;MQ0=23;MQRankSum=6.171;QD=18.21;ReadPosRankSum=3.620;VQSLOD=4.0159;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,4:36:27.09:489,27,0	0/0:10,0:10:13.66:0,14,102	0/0:43,0:14:14.71:0,15,201	0/0:55,0:20:5.86:0,6,99	0/0:18,0:18:14.90:0,15,119	1/1:6,10:16:12.04:294,12,0	1/1:10,19:32:29.82:624,30,0	0/1:24,0:22:17.66:18,0,109	0/0:14,0:14:21.11:0,21,158	1/1:11,17:27:6.65:900,7,0	1/1:7,8:15:7.15:298,7,0	1/1:8,20:29:35.75:758,36,0	1/1:8,6:17:9.50:211,10,0	1/1:3,14:18:21.07:473,21,0	0/0:19,0:16:12.75:0,13,90	0/0:16,0:15:8.17:0,8,39	1/1:7,7:18:12.93:288,13,0	1/1:6,9:20:15.05:355,15,0	1/1:9,12:23:48.56:864,49,0	1/1:17,0:17:18.50:271,19,0	1/1:17,17:36:18.06:388,18,0	1/1:13,12:26:29.95:494,30,0	1/1:8,10:19:14.71:298,15,0	1/1:10,10:21:17.42:414,17,0	0/0:17,0:17:20.85:0,21,158	1/1:17,1:25:31.30:459,31,0	1/1:2,15:19:17.77:323,18,0	1/1:10,0:11:1.40:30,1,0
chr10	95710342	.	TC	T	565.77	PASS	AB=0.822;AC=9;AF=0.161;AN=56;BaseQRankSum=10.505;DP=644;FS=1.886;HRun=1;HaplotypeScore=161.9837;InbreedingCoeff=0.5826;MQ=54.31;MQ0=21;MQRankSum=-7.321;QD=5.77;ReadPosRankSum=-2.000;VQSLOD=-0.3252;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:51.09:0,51,563	0/1:6,4:10:53.05:81,0,53	0/0:40,0:13:39.01:0,39,472	0/0:55,0:22:40.83:0,41,584	1/1:13,4:17:9.59:98,10,0	0/0:15,0:15:21.03:0,21,229	0/0:32,0:32:57.03:0,57,584	0/0:22,0:21:59.73:0,60,682	0/1:13,4:17:55.55:151,0,56	0/0:25,0:24:69.14:0,69,833	0/0:17,0:17:43.64:0,44,487	0/0:28,0:29:54.01:0,54,569	0/0:15,0:15:21.05:0,21,256	0/0:21,0:21:36.04:0,36,375	1/1:16,6:19:28.56:154,29,0	0/1:15,1:15:50.36:50,0,52	0/0:19,0:19:23.89:0,24,273	0/0:20,0:19:21.92:0,22,214	0/0:20,0:20:60.12:0,60,709	0/0:19,0:19:42.12:0,42,530	0/0:32,0:32:38.66:0,39,455	0/0:27,0:27:60.56:0,61,637	0/0:17,0:17:29.64:0,30,322	0/0:23,0:23:32.85:0,33,380	1/1:9,7:16:27.28:186,27,0	0/0:23,0:23:66.16:0,66,808	0/0:22,0:22:30.02:0,30,339	0/0:12,0:12:30.09:0,30,385
chr10	95710351	.	CTCT	C	1971.62	PASS	AB=0.857;AC=11;AF=0.196;AN=56;BaseQRankSum=10.489;DP=649;FS=11.776;HRun=0;HaplotypeScore=174.4370;InbreedingCoeff=0.8774;MQ=55.97;MQ0=15;MQRankSum=-8.489;QD=19.72;ReadPosRankSum=-3.148;VQSLOD=1.7451;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:46.28:0,46,724	1/1:7,4:11:14.87:232,15,0	0/0:46,0:18:41.01:0,41,757	0/0:55,0:28:37.59:0,38,766	0/1:15,3:18:7.31:272,0,7	0/0:15,0:15:21.04:0,21,314	0/0:34,0:34:63.16:0,63,899	0/0:20,0:20:56.05:0,56,541	1/1:15,3:18:41.70:571,42,0	0/0:29,0:29:82.15:0,82,1176	0/0:21,0:21:55.38:0,55,707	0/0:28,0:28:54.14:0,54,826	0/0:18,0:18:32.98:0,33,488	0/0:20,0:20:36.12:0,36,536	1/1:15,6:21:24.17:498,24,0	1/1:16,1:16:9.21:180,9,0	0/0:16,0:16:23.61:0,24,311	0/0:18,0:17:18.06:0,18,267	0/0:25,0:25:71:0,71,962	0/0:18,0:18:42.57:0,43,612	0/0:34,0:34:42.61:0,43,666	0/0:23,0:23:43.84:0,44,471	0/0:14,0:14:13.76:0,14,279	0/0:25,0:25:46.59:0,47,649	1/1:9,6:15:24.12:393,24,0	0/0:21,0:21:55.45:0,55,654	0/0:22,0:22:23.53:0,24,423	0/0:7,0:7:15.30:0,15,152
chr10	95710354	.	T	TC	1557.10	PASS	AB=0.975;AC=25;AF=0.446;AN=56;BaseQRankSum=12.603;DP=639;FS=3.259;HRun=1;HaplotypeScore=158.6818;InbreedingCoeff=0.0887;MQ=58.29;MQ0=14;MQRankSum=-7.562;QD=4.20;ReadPosRankSum=3.432;VQSLOD=0.7740;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:40:22.91:23,0,426	1/1:11,0:11:21.34:134,21,0	0/0:51,0:21:59.22:0,59,719	0/0:55,0:31:52.65:0,53,658	1/1:18,0:18:24.84:181,25,0	0/1:12,0:12:2.09:2,0,86	0/1:35,0:35:20.99:21,0,412	0/0:20,0:20:45.24:0,45,498	1/1:18,0:18:48.89:358,49,0	0/0:29,1:30:14.40:0,14,541	0/0:20,0:20:40.31:0,40,530	0/1:27,0:28:26.33:26,0,167	0/0:19,1:20:1.18:0,1,294	0/1:20,0:20:4.29:4,0,174	1/1:21,0:21:40.68:366,41,0	1/1:17,0:16:21.76:156,22,0	0/1:14,0:14:5.59:6,0,138	0/1:18,0:18:23.71:24,0,29	0/1:23,1:24:34.61:35,0,439	0/0:17,0:17:34.57:0,35,443	0/0:31,0:32:20.39:0,20,403	0/1:18,1:20:75.64:76,0,282	0/1:10,0:11:51.95:52,0,88	0/0:23,0:23:12.86:0,13,286	1/1:15,0:15:28.38:212,28,0	0/1:18,0:18:25.21:25,0,223	0/1:22,0:22:30.59:31,0,229	0/1:7,0:7:10.13:10,0,54
chr10	95710355	.	T	TCACACACA	10005.64	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-0.447;DP=673;FS=11.158;HRun=0;HaplotypeScore=203.2308;InbreedingCoeff=0.9883;MQ=59.86;MQ0=14;MQRankSum=-10.515;QD=64.97;ReadPosRankSum=-2.234;VQSLOD=2.9942;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:51.16:0,51,1121	1/1:8,4:12:24.08:830,24,0	0/0:52,0:22:44.36:0,44,892	0/0:57,0:33:32.80:0,33,902	1/1:11,8:21:21.54:578,22,0	0/0:12,0:12:18.06:0,18,402	0/0:35,0:35:48.08:0,48,1110	1/1:11,15:27:66.21:2147,66,0	1/1:10,11:22:57.20:1973,57,0	0/0:30,0:31:69.95:0,70,1817	0/0:20,0:20:51.17:0,51,1219	0/0:28,0:28:39.42:0,39,867	0/0:20,0:20:33.11:0,33,834	0/0:20,0:20:32.77:0,33,752	1/1:12,10:24:42.14:1522,42,0	1/1:11,10:21:32.69:1317,33,0	0/0:14,0:14:17.11:0,17,435	0/0:19,0:18:14.07:0,14,325	0/0:24,0:24:47.33:0,47,1164	0/0:18,0:18:45.15:0,45,1120	0/0:32,0:32:38.47:0,38,1034	0/0:20,0:21:39.12:0,39,784	0/0:11,0:11:17.91:0,18,357	0/0:23,0:23:42.14:0,42,1066	1/1:14,5:19:32.57:1001,33,0	0/0:18,0:18:39.07:0,39,922	0/0:22,0:22:29.98:0,30,725	1/1:1,6:7:15.05:636,15,0
chr10	95710897	.	A	AG	4700.40	PASS	AB=0.661;AC=28;AF=0.500;AN=56;BaseQRankSum=-11.808;DP=518;FS=11.727;HRun=9;HaplotypeScore=77.4316;InbreedingCoeff=0.7732;MQ=77.02;MQ0=0;MQRankSum=-3.405;QD=17.41;ReadPosRankSum=-2.362;VQSLOD=3.4154;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:83.39:0,83,704	0/0:0,0:4:8.15:0,8,24	0/0:24,0:23:35.76:0,36,291	0/0:19,0:18:20.74:0,21,161	0/0:2,0:12:20.37:0,20,60	1/1:7,5:12:14.87:147,15,0	1/1:5,14:19:33.09:365,33,0	0/0:4,0:13:18.09:0,18,55	0/0:1,0:25:40.74:0,41,120	0/1:7,7:14:25.03:198,0,25	1/1:6,4:10:8.90:70,9,0	1/1:5,14:20:41.95:446,42,0	1/1:6,18:24:39.11:431,39,0	1/1:4,16:20:42.06:464,42,0	0/0:1,0:22:36.67:0,37,108	0/0:3,0:25:38.70:0,39,114	0/0:31,0:31:65.91:0,66,568	0/0:14,1:14:2.80:0,3,250	1/1:8,9:17:27.05:287,27,0	1/1:5,10:16:18.05:198,18,0	1/1:7,19:26:45.12:498,45,0	0/1:9,10:19:22.21:227,0,22	1/1:3,8:11:18.05:199,18,0	1/1:2,19:21:57.15:631,57,0	0/0:2,0:11:18.33:0,18,54	1/1:11,7:18:0.61:209,1,0	1/1:9,14:23:30.08:332,30,0	0/0:0,0:9:18.33:0,18,54
chr10	95713370	.	T	TGTGTGC	4034.16	PASS	AB=0.776;AC=16;AF=0.286;AN=56;BaseQRankSum=10.409;DP=759;FS=12.742;HRun=0;HaplotypeScore=168.1298;InbreedingCoeff=0.8208;MQ=56.94;MQ0=5;MQRankSum=-4.081;QD=18.17;ReadPosRankSum=2.807;VQSLOD=2.5560;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:48,0:48:99:485,0,216	1/1:2,6:9:8.39:221,8,0	0/0:44,0:28:69.08:0,69,942	0/0:19,0:12:36.05:0,36,416	1/1:4,21:29:18.06:497,18,0	0/0:17,0:17:45.08:0,45,787	0/0:27,0:27:72.19:0,72,1466	0/1:6,0:32:3.47:318,0,3	1/1:5,19:28:24.08:774,24,0	0/0:39,0:38:99:0,111,1769	0/0:15,0:15:39.11:0,39,805	0/0:44,0:44:89.06:0,89,2142	0/0:24,0:24:69.16:0,69,1328	0/0:23,0:23:66.05:0,66,1324	1/1:3,17:23:18.06:550,18,0	1/1:1,17:18:16.69:836,17,0	0/0:26,0:26:78.15:0,78,1567	0/0:28,0:28:74.02:0,74,1183	0/0:26,0:26:72.08:0,72,1186	0/0:25,0:25:68.96:0,69,1250	0/0:55,0:54:99:0,150,2922	0/0:22,0:21:56.92:0,57,918	0/0:17,0:17:48.08:0,48,790	0/0:36,0:36:90.15:0,90,1564	1/1:1,18:22:9.03:312,9,0	0/0:20,0:20:57.17:0,57,1098	0/0:30,0:30:78.12:0,78,1501	1/1:2,0:10:11.86:42,12,0
chr10	95713543	.	ATGCATG	A	1751.42	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.150;DP=488;FS=0.720;HRun=0;HaplotypeScore=117.3020;InbreedingCoeff=0.9451;MQ=64.62;MQ0=0;MQRankSum=-3.805;QD=54.73;ReadPosRankSum=-2.701;VQSLOD=3.0307;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.27:0,78,2742	0/0:6,0:6:18.06:0,18,597	0/0:14,0:10:20.01:0,20,292	0/0:9,0:6:12.04:0,12,328	0/0:19,0:19:51.17:0,51,1883	0/0:17,0:17:30.10:0,30,1129	0/0:22,0:22:57.16:0,57,1840	1/1:0,27:26:75.23:1664,75,0	0/0:13,0:13:27.05:0,27,792	0/0:36,0:36:99:0,99,3503	0/0:15,0:15:45.15:0,45,1546	0/0:16,0:16:42.14:0,42,1474	0/0:15,0:15:33.11:0,33,1110	0/0:12,0:12:33.02:0,33,1117	0/0:11,0:11:27.08:0,27,928	0/0:15,0:15:36.12:0,36,1335	0/0:26,0:26:72.25:0,72,2421	0/0:17,0:17:39.13:0,39,1468	0/0:17,0:17:51.18:0,51,1587	0/0:13,0:13:39.13:0,39,1330	0/0:22,0:22:59.63:0,60,2151	0/0:21,0:21:63.22:0,63,2236	0/0:14,0:14:35.50:0,35,1268	0/0:21,0:21:54.19:0,54,1785	0/0:21,0:21:63.19:0,63,2226	0/0:24,0:24:72.25:0,72,2392	0/0:10,0:10:30.10:0,30,1056	1/1:0,5:5:9.03:201,9,0
chr10	95713869	.	A	AC	448.11	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=0.931;DP=581;FS=1.694;HRun=8;HaplotypeScore=63.9493;InbreedingCoeff=0.6764;MQ=71.31;MQ0=3;MQRankSum=-0.418;QD=12.45;ReadPosRankSum=-2.025;VQSLOD=2.7088;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:63.49:0,63,577	0/0:6,0:6:12:0,12,109	0/0:25,0:20:29.49:0,29,254	0/0:23,0:14:29.52:0,30,255	0/0:18,0:18:42:0,42,379	0/0:14,0:14:39.02:0,39,357	0/0:24,0:24:60.03:0,60,548	1/1:4,13:16:7.82:310,8,0	0/0:17,0:17:51.03:0,51,466	0/0:19,0:19:51.02:0,51,463	0/0:10,0:10:24:0,24,219	0/0:33,0:33:86.97:0,87,788	0/0:27,0:27:69.02:0,69,630	0/0:24,0:24:62.98:0,63,565	0/0:30,0:30:84.05:0,84,768	0/0:18,0:18:52.66:0,53,455	0/0:30,0:30:81:0,81,731	0/0:30,0:30:87.05:0,87,795	0/0:18,0:18:45.02:0,45,410	0/0:18,0:18:54.03:0,54,494	0/0:50,0:49:99:0,103,1169	0/0:15,0:15:15.42:0,15,304	0/1:8,0:8:19.12:19,0,94	0/0:18,0:18:47.61:0,48,422	0/0:12,0:12:23.60:0,24,202	0/0:19,1:20:6.17:0,6,324	0/0:20,0:20:54.03:0,54,494	1/1:6,5:11:11.27:235,11,0
chr10	95714661	.	CCTCT	C	1628.87	PASS	AB=0.931;AC=28;AF=0.636;AN=44;BaseQRankSum=-1.260;DP=680;FS=2.727;HRun=0;HaplotypeScore=136.3085;InbreedingCoeff=0.0157;MQ=66.86;MQ0=14;MQRankSum=-0.803;QD=3.58;ReadPosRankSum=2.070;VQSLOD=2.5521;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:23:8.99:77,9,0	1/1:9,3:12:3.01:46,3,0	./.	./.	1/1:19,0:21:6.02:82,6,0	1/1:12,6:18:3.01:46,3,0	1/1:23,4:28:0.16:0,0,0	./.	1/1:26,6:32:24.04:320,24,0	0/1:24,0:23:16.31:16,0,58	./.	0/1:39,2:41:78.03:102,0,78	0/1:25,2:31:26.45:26,0,75	0/1:17,1:20:31.91:32,0,92	1/1:34,2:38:21.06:278,21,0	1/1:21,5:26:36.05:446,36,0	./.	./.	0/0:13,0:13:2.74:0,3,12	0/0:18,0:21:2.80:0,3,13	0/1:36,0:36:28.31:46,0,28	0/1:20,1:22:8.77:9,0,41	0/0:12,0:19:6.02:0,6,75	0/1:18,0:19:6.44:40,0,6	1/1:21,0:22:3.01:42,3,0	0/1:22,0:22:18.61:19,0,452	0/0:13,0:12:9.60:0,10,75	1/1:6,0:14:15.02:140,15,0
chr10	95714839	.	A	AGT	31340.50	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-5.094;DP=1328;FS=5.227;HRun=0;HaplotypeScore=214.9392;InbreedingCoeff=0.7670;MQ=52.46;MQ0=43;MQRankSum=6.214;QD=25.36;ReadPosRankSum=4.838;VQSLOD=5.2571;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:45,0:46:99:1174,105,0	1/1:17,0:19:26.82:318,27,0	0/0:41,0:6:18.05:0,18,211	0/0:48,0:13:31.83:0,32,322	1/1:27,1:28:51.09:579,51,0	1/1:2,30:33:47.94:810,48,0	1/1:7,36:43:75.09:1264,75,0	0/1:63,0:36:63.29:411,0,63	1/1:63,0:60:74.39:786,74,0	1/1:10,45:53:99:2171,129,0	1/1:3,19:21:39.13:658,39,0	1/1:12,57:67:99:1710,102,0	1/1:9,38:49:75.26:1246,75,0	1/1:4,32:36:75.26:1265,75,0	1/1:74,0:75:71.80:871,72,0	1/1:73,0:73:97.46:993,97,0	1/1:38,0:37:96.18:1121,96,0	1/1:24,0:20:12.94:462,13,0	1/1:10,11:16:33.11:552,33,0	1/1:7,29:37:32.61:1079,33,0	1/1:65,95:150:99:5715,352,0	1/1:5,45:49:81.28:1363,81,0	1/1:5,30:35:63.22:1063,63,0	1/1:29,31:56:54.47:1846,54,0	1/1:36,0:38:89.92:980,90,0	1/1:13,36:46:66.95:1563,67,0	1/1:2,20:22:45.15:758,45,0	1/1:19,0:19:53.88:583,54,0
chr10	95714846	.	G	GTA	25346.73	PASS	AB=0.964;AC=43;AF=0.768;AN=56;BaseQRankSum=1.076;DP=1333;FS=17.730;HRun=0;HaplotypeScore=237.3474;InbreedingCoeff=0.0808;MQ=52.24;MQ0=38;MQRankSum=3.551;QD=20.52;ReadPosRankSum=13.240;VQSLOD=2.9278;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,35:50:99:2078,117,0	1/1:8,9:17:33.02:553,33,0	0/0:44,0:6:18.06:0,18,272	0/0:54,0:14:35.16:0,35,437	1/1:8,22:30:54.17:974,54,0	1/1:32,0:32:47.79:418,48,0	0/1:44,0:44:18.20:558,0,18	0/1:32,29:32:78.73:776,0,79	1/1:22,39:58:86.88:1433,87,0	0/1:53,0:52:14.91:879,0,15	1/1:20,0:19:39.01:341,39,0	0/1:69,0:67:27.81:755,0,28	1/1:49,0:49:22.02:592,22,0	0/1:37,0:37:31.75:584,0,32	1/1:32,49:79:66.86:1640,67,0	1/1:20,55:73:92.86:1789,93,0	1/1:6,31:36:88.34:1876,88,0	1/1:13,15:24:25.08:902,25,0	0/1:20,0:15:53.81:238,0,54	1/1:33,0:33:21.64:528,22,0	1/1:156,0:148:99:2653,143,0	1/1:48,0:47:59.09:710,59,0	0/1:36,0:36:40.79:467,0,41	0/1:58,0:54:89.14:849,0,89	1/1:10,28:38:96.30:1766,96,0	0/1:50,0:46:99:586,0,183	1/1:23,0:23:3.10:355,3,0	1/1:7,17:24:60.16:1045,60,0
chr10	95715002	.	A	ATGTGTGTGAG	8781.19	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=5.115;DP=1415;FS=4.579;HRun=0;HaplotypeScore=571.6184;InbreedingCoeff=0.2599;MQ=50.42;MQ0=29;MQRankSum=-5.114;QD=13.49;ReadPosRankSum=0.407;VQSLOD=0.5858;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,6:38:25.49:444,25,0	0/1:31,0:30:99:367,0,145	0/0:36,0:10:11.97:0,12,226	0/0:35,0:16:22.86:0,23,535	0/1:55,0:54:99:294,0,629	0/0:26,0:26:69.20:0,69,1786	0/0:42,0:42:96.74:0,97,2519	0/1:75,0:59:6:1444,0,6	0/1:88,0:88:99:649,0,909	0/0:56,0:56:99:0,118,3116	0/0:20,0:20:49.05:0,49,1114	0/0:60,0:60:99:0,149,3731	0/0:67,0:67:99:0,174,4155	0/0:43,0:43:99:0,108,2814	0/1:138,0:138:99:1173,0,617	0/1:88,0:88:99:1057,0,743	1/1:27,0:26:47.87:830,48,0	1/1:18,0:18:45.08:871,45,0	0/0:25,0:21:44.23:0,44,1022	0/0:23,0:23:54.16:0,54,1327	0/0:111,0:109:99:0,242,5898	0/0:33,0:33:78.73:0,79,2197	0/0:33,0:33:75.71:0,76,2001	0/0:59,0:59:99:0,138,3509	0/1:54,0:53:99:815,0,231	0/0:59,0:57:99:0,136,3902	0/0:36,0:35:89.95:0,90,2393	0/1:39,0:38:99:838,0,498
chr10	95715023	.	A	AGT	2327.81	PASS	AB=0.838;AC=10;AF=0.179;AN=56;BaseQRankSum=12.656;DP=1374;FS=0.409;HRun=0;HaplotypeScore=392.3553;InbreedingCoeff=-0.2176;MQ=51.09;MQ0=28;MQRankSum=-6.572;QD=4.29;ReadPosRankSum=-1.870;VQSLOD=1.0762;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:39,3:42:75.49:75,0,188	0/1:24,8:31:73.80:217,0,74	0/0:37,0:8:23.06:0,23,220	0/0:45,0:19:29.73:0,30,301	0/0:38,9:47:31.65:0,32,397	0/0:32,0:32:78.21:0,78,1036	0/0:44,0:44:99:0,108,1411	0/1:52,6:46:99:271,0,221	0/1:66,13:79:99:136,0,502	0/0:60,0:60:99:0,156,2047	0/0:21,0:21:51.13:0,51,633	0/0:62,0:62:99:0,166,2158	0/0:59,0:59:99:0,141,1812	0/0:46,0:46:99:0,123,1618	0/1:101,24:125:99:262,0,350	0/1:51,24:75:99:479,0,340	0/1:23,6:28:99:191,0,343	0/1:18,1:19:99:107,0,285	0/0:19,0:16:39.13:0,39,519	0/0:23,0:23:50.96:0,51,632	0/0:114,0:113:99:0,273,3523	0/0:39,0:39:99:0,102,1311	0/0:34,0:34:78.04:0,78,984	0/0:56,0:56:99:0,144,1877	0/1:27,17:43:99:282,0,102	0/0:57,0:55:99:0,138,1814	0/0:34,0:33:96.30:0,96,1262	0/1:29,11:39:99:453,0,233
chr10	95715067	.	AGT	A	4728.41	PASS	AB=0.858;AC=12;AF=0.214;AN=56;BaseQRankSum=21.329;DP=1402;FS=3.179;HRun=0;HaplotypeScore=402.3312;InbreedingCoeff=0.6055;MQ=54.11;MQ0=20;MQRankSum=-3.765;QD=9.93;ReadPosRankSum=-2.779;VQSLOD=3.0445;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:64.69:0,65,1090	0/1:20,5:24:2.21:223,0,2	0/0:39,0:13:19.93:0,20,393	0/0:43,0:26:32.48:0,32,545	0/1:29,7:36:13.82:240,0,14	0/0:32,0:32:93.10:0,93,1565	0/0:38,0:38:99:0,99,1638	0/1:43,1:33:77.24:379,0,77	1/1:69,17:85:99:1158,169,0	0/0:72,0:72:99:0,205,3282	0/0:24,0:23:66.19:0,66,1076	0/0:64,0:64:99:0,174,2843	0/0:58,0:58:99:0,165,2594	0/0:49,0:49:99:0,138,2286	1/1:88,16:103:99:931,114,0	1/1:69,23:92:74.54:964,75,0	0/0:37,1:37:7.53:0,8,1221	0/0:28,0:28:7.61:0,8,1047	0/0:31,0:27:72.17:0,72,1126	0/0:30,0:30:77.77:0,78,1300	0/0:119,0:117:99:0,297,4849	0/0:39,0:39:99:0,108,1842	0/0:37,0:37:93.09:0,93,1535	0/0:61,0:61:99:0,153,2544	0/1:37,14:50:19.49:225,0,19	0/0:50,0:50:99:0,144,2348	0/0:38,0:38:99:0,99,1605	1/1:33,5:38:88.18:610,88,0
chr10	95715075	.	TGA	T	9854.46	PASS	AB=0.848;AC=17;AF=0.304;AN=56;BaseQRankSum=19.634;DP=1392;FS=0.245;HRun=0;HaplotypeScore=380.0983;InbreedingCoeff=0.7456;MQ=55.11;MQ0=14;MQRankSum=-8.730;QD=18.39;ReadPosRankSum=-3.272;VQSLOD=3.6743;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,3:36:64.95:0,65,1129	1/1:7,18:25:25.37:493,25,0	0/0:35,0:14:26.14:0,26,382	0/0:39,0:25:21.47:0,21,516	1/1:15,20:35:52.83:733,53,0	0/0:34,0:34:96.13:0,96,1665	0/0:39,0:39:99:0,105,1665	0/1:30,16:36:85.25:582,0,85	1/1:33,52:84:99:2083,121,0	0/0:71,0:71:99:0,187,3205	0/0:23,0:22:63.20:0,63,1062	0/0:67,0:67:99:0,183,2971	0/0:59,0:59:99:0,159,2569	0/0:50,0:50:99:0,138,2317	1/1:39,63:101:99:2151,124,0	1/1:45,40:85:99:1863,114,0	0/1:39,4:41:33.75:34,0,1276	0/1:27,4:31:70.67:71,0,1083	0/0:31,0:29:74.93:0,75,1127	0/0:29,0:29:77.41:0,77,1311	0/0:120,1:120:99:0,315,5059	0/0:39,0:39:99:0,111,1908	0/0:34,0:34:93.30:0,93,1604	0/0:60,1:61:99:0,162,2703	1/1:31,19:50:59.46:799,59,0	0/0:50,0:50:99:0,135,2302	0/0:36,0:36:96.26:0,96,1544	1/1:6,27:34:70.69:1046,71,0
chr10	95715433	.	AGTGTGTGTGT	A	4323.59	PASS	AB=0.828;AC=22;AF=0.440;AN=50;BaseQRankSum=-4.283;DP=824;FS=0.000;HRun=0;HaplotypeScore=260.0206;InbreedingCoeff=0.2544;MQ=47.76;MQ0=23;MQRankSum=-0.073;QD=8.75;ReadPosRankSum=3.717;VQSLOD=3.4110;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:18:1.26:0,1,6	0/0:20,0:21:18.33:0,18,212	./.	./.	0/0:14,0:18:2.76:0,3,77	1/1:11,11:25:12.04:285,12,0	1/1:24,3:25:3.05:74,3,0	0/0:29,0:22:15.44:0,15,213	0/0:32,0:34:10.18:0,10,64	1/1:26,14:43:19.14:883,19,0	./.	0/1:38,13:52:9.30:236,0,9	1/1:21,6:29:33.71:630,34,0	0/1:13,7:18:0:0,0,0	0/0:26,0:27:1.66:0,2,55	0/0:21,0:23:12.52:0,13,174	0/1:25,0:37:43.77:196,0,44	0/1:18,0:19:99:277,0,127	1/1:17,8:27:30.04:651,30,0	1/1:17,12:31:10.51:183,11,0	0/1:65,1:65:90.77:154,0,91	0/0:13,10:25:1.06:0,1,5	1/1:13,12:26:5.74:24,6,0	0/1:34,1:36:39.09:80,0,39	0/0:19,0:23:15.26:0,15,230	0/1:24,10:33:3.36:509,0,3	0/1:12,6:19:16.24:141,0,16	0/0:17,0:17:29.98:0,30,560
chr10	95715441	.	T	TGAGA	1315.61	PASS	AB=0.767;AC=8;AF=0.143;AN=56;BaseQRankSum=5.866;DP=804;FS=7.281;HRun=0;HaplotypeScore=220.2753;InbreedingCoeff=0.1382;MQ=44.84;MQ0=28;MQRankSum=-3.522;QD=7.88;ReadPosRankSum=-2.149;VQSLOD=1.4777;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:32.46:0,32,464	0/1:14,4:20:5.30:307,0,5	0/0:28,0:5:15.02:0,15,246	0/0:42,0:9:27.09:0,27,426	1/1:14,3:18:8.36:149,8,0	0/0:25,0:25:33.66:0,34,461	0/0:26,0:24:34.32:0,34,465	0/1:31,0:23:80.94:440,0,81	0/1:7,24:33:13.69:157,0,14	0/0:41,0:41:87.45:0,87,1389	0/0:11,0:11:18.06:0,18,267	0/0:47,0:46:65.26:0,65,1040	0/0:31,0:31:63.03:0,63,880	0/0:20,0:18:17.99:0,18,276	0/0:9,19:27:5.10:0,5,55	0/1:7,14:22:26.29:53,0,26	0/0:35,0:35:56.97:0,57,799	0/0:19,0:18:41.81:0,42,543	0/0:24,0:23:61.36:0,61,826	0/0:31,0:31:44.84:0,45,633	0/0:65,0:64:81.47:0,81,1184	0/0:25,0:25:12.89:0,13,393	0/0:26,0:26:20.26:0,20,277	0/0:35,0:35:47.17:0,47,729	0/1:19,3:23:37.80:123,0,38	0/0:33,0:32:93.27:0,93,1321	0/0:20,0:20:42.08:0,42,572	0/1:14,2:15:99:223,0,190
chr10	95715477	.	T	TGCGC	2683.44	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-1.450;DP=627;FS=6.274;HRun=0;HaplotypeScore=188.7734;InbreedingCoeff=0.9372;MQ=54.08;MQ0=21;MQRankSum=0.295;QD=15.88;ReadPosRankSum=-1.645;VQSLOD=2.6138;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:30.10:0,30,454	1/1:18,1:17:24.56:264,25,0	0/0:10,0:5:11.97:0,12,148	0/0:22,0:6:3.08:0,3,196	1/1:15,0:15:8.35:124,8,0	0/0:26,0:26:41.50:0,42,627	0/0:25,0:24:45.62:0,46,710	1/1:16,0:14:32.98:363,33,0	1/1:23,1:23:30.96:390,31,0	0/0:37,0:36:73.87:0,74,1214	0/0:12,0:12:24.08:0,24,353	0/0:28,0:27:41.14:0,41,581	0/0:24,0:24:63.67:0,64,868	0/0:17,0:16:21.07:0,21,318	1/1:35,1:34:50.65:664,51,0	1/1:18,1:19:35.14:474,35,0	0/0:26,0:26:30.06:0,30,411	0/0:12,0:11:26.95:0,27,374	0/0:28,0:25:66.16:0,66,980	0/0:22,0:22:36.12:0,36,511	0/0:35,0:34:35.62:0,36,544	0/0:28,0:28:42.01:0,42,609	0/0:18,0:18:6.59:0,7,178	0/0:22,0:23:24.08:0,24,368	1/1:22,2:23:25.64:315,26,0	0/0:23,0:22:60.20:0,60,971	0/0:20,0:20:45.13:0,45,652	1/1:16,0:16:23.05:293,23,0
chr10	95719538	.	A	AAAGAGCCT	58657.37	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.070;DP=628;FS=7.386;HRun=0;HaplotypeScore=193.6931;InbreedingCoeff=0.9962;MQ=82.72;MQ0=0;MQRankSum=-11.655;QD=102.55;ReadPosRankSum=2.074;VQSLOD=5.4328;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,31:46:99:4543,108,0	1/1:0,8:9:21.07:948,21,0	0/0:33,0:33:90.29:0,90,2386	0/0:23,0:23:60.20:0,60,1627	1/1:8,15:27:63.17:2344,63,0	1/1:6,12:18:51.17:2054,51,0	1/1:9,13:22:63.22:2422,63,0	1/1:34,12:46:99:4684,129,0	1/1:4,11:19:42.14:1852,42,0	1/1:12,8:21:60.20:2384,60,0	1/1:9,9:18:45.15:1814,45,0	1/1:11,12:22:63.20:2427,63,0	1/1:3,9:12:33.11:1378,33,0	1/1:12,21:33:93.25:3705,93,0	1/1:6,15:22:51.17:2144,51,0	1/1:5,18:24:63.22:2759,63,0	1/1:4,10:15:29.99:1207,30,0	1/1:6,14:23:54.19:2308,54,0	1/1:10,11:25:66.20:2324,66,0	1/1:7,10:17:45.14:1792,45,0	1/1:7,9:16:36.12:1466,36,0	1/1:7,10:17:45.15:1798,45,0	1/1:7,14:21:60.18:2276,60,0	1/1:8,11:19:39.02:1455,39,0	1/1:7,9:18:36.12:1561,36,0	1/1:14,21:35:99:4269,105,0	1/1:8,8:15:42.14:1694,42,0	1/1:3,7:10:24.08:1052,24,0
chr10	95719570	.	A	AC	11886.34	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-1.175;DP=569;FS=0.688;HRun=3;HaplotypeScore=202.9874;InbreedingCoeff=0.9966;MQ=80.66;MQ0=0;MQRankSum=-4.488;QD=35.91;ReadPosRankSum=2.225;VQSLOD=3.8940;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,102,1222	0/0:7,0:7:15.05:0,15,178	0/0:29,0:29:78.16:0,78,891	0/0:20,0:20:53.30:0,53,566	0/0:27,0:27:66.03:0,66,769	1/1:0,15:16:45.15:625,45,0	1/1:2,21:23:57.19:797,57,0	1/1:5,26:31:78.24:1058,78,0	0/0:19,0:19:48.12:0,48,575	1/1:2,23:25:66.22:922,66,0	1/1:0,9:9:24.08:335,24,0	1/1:0,25:25:72.24:1006,72,0	1/1:0,11:11:33.11:455,33,0	1/1:0,30:30:90.30:1257,90,0	0/0:19,0:19:42.13:0,42,503	0/0:19,0:19:57.12:0,57,655	0/0:17,0:17:39.12:0,39,466	0/0:21,0:21:54.17:0,54,646	1/1:3,10:13:30.10:419,30,0	1/1:0,14:14:39.13:545,39,0	1/1:2,13:15:30.10:420,30,0	1/1:1,17:18:45.15:628,45,0	1/1:3,18:21:51.14:711,51,0	1/1:1,21:22:50.79:712,51,0	0/0:13,0:13:36.11:0,36,432	1/1:9,27:36:81.26:1115,81,0	1/1:2,13:15:42.14:587,42,0	1/1:0,7:7:21.07:293,21,0
chr10	95720188	.	T	TC	8475.34	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-12.892;DP=598;FS=12.247;HRun=3;HaplotypeScore=60.8467;InbreedingCoeff=0.9971;MQ=78.69;MQ0=0;MQRankSum=0.032;QD=35.17;ReadPosRankSum=2.127;VQSLOD=4.6726;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,58:61:99:2183,157,0	1/1:0,11:12:30.10:414,30,0	0/0:18,0:18:41.84:0,42,465	0/0:17,0:17:45.04:0,45,493	1/1:2,21:23:57.19:797,57,0	0/0:15,0:15:45.14:0,45,538	0/0:28,0:28:78.24:0,78,936	0/0:22,0:22:48.14:0,48,566	1/1:1,19:20:45.15:630,45,0	0/0:13,0:13:36.11:0,36,431	0/0:10,0:10:27.08:0,27,324	0/0:23,0:23:66.20:0,66,791	0/0:15,0:15:42.12:0,42,492	0/0:18,0:18:51.15:0,51,608	1/1:2,13:15:33.11:462,33,0	1/1:2,23:25:66.22:924,66,0	1/1:1,30:31:75.25:1050,75,0	1/1:1,29:30:84.28:1176,84,0	0/0:20,0:20:54.13:0,54,630	0/0:17,0:17:45.14:0,45,539	0/0:30,0:30:90.28:0,90,1078	0/0:14,0:14:39.12:0,39,468	0/0:8,0:8:15.04:0,15,179	0/0:36,0:36:96.29:0,96,1150	1/1:2,22:24:60.20:838,60,0	0/0:28,0:28:78.22:0,78,918	0/0:12,0:12:33.10:0,33,395	0/0:13,0:13:36.11:0,36,431
chr10	95720529	.	GCA	G	7164.88	PASS	AB=0.939;AC=39;AF=0.722;AN=54;BaseQRankSum=-1.697;DP=622;FS=2.388;HRun=0;HaplotypeScore=138.5223;InbreedingCoeff=0.2934;MQ=48.17;MQ0=18;MQRankSum=1.839;QD=13.65;ReadPosRankSum=1.781;VQSLOD=5.0616;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:26:0:0,0,0	0/0:8,0:8:0.47:0,0,1	0/0:14,0:2:2.97:0,3,20	0/0:25,0:3:3.01:0,3,47	0/0:12,0:12:2.99:0,3,24	1/1:7,8:15:17.88:187,18,0	1/1:16,20:36:24.97:364,25,0	1/1:23,2:19:22.36:178,22,0	0/1:23,0:22:10.84:40,0,11	0/1:14,11:24:14.19:389,0,14	1/1:3,7:11:11.93:142,12,0	1/1:13,8:20:41.86:468,42,0	1/1:8,1:9:2.61:154,3,0	1/1:9,5:14:27.08:319,27,0	./.	1/1:23,0:22:11.50:51,11,0	0/1:21,0:20:33.59:35,0,34	0/1:21,0:21:8.41:91,0,8	1/1:6,3:6:18.05:213,18,0	1/1:3,6:9:11.86:113,12,0	1/1:64,43:110:99:2151,123,0	1/1:5,3:10:16.74:138,17,0	1/1:4,6:10:9.03:106,9,0	1/1:29,29:57:97.37:1320,97,0	0/0:22,0:21:0:0,0,0	1/1:10,10:20:44.80:481,45,0	1/1:3,5:6:15.03:162,15,0	1/1:6,6:12:0.23:61,0,0
chr10	95720543	.	ACACACACACG	A	1133.38	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=5.652;DP=656;FS=27.547;HRun=0;HaplotypeScore=224.3813;InbreedingCoeff=0.7876;MQ=48.40;MQ0=24;MQRankSum=-6.310;QD=11.45;ReadPosRankSum=1.746;VQSLOD=1.0438;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:17:0.37:0,0,1	0/0:5,0:5:0.89:0,1,2	0/0:19,0:6:14.68:0,15,173	0/0:33,0:4:12.01:0,12,225	0/0:11,0:11:2.99:0,3,23	0/0:17,0:17:27.01:0,27,569	0/0:33,0:33:51.60:0,52,1096	0/0:28,0:22:50.61:0,51,631	1/1:19,1:19:18.43:253,18,0	0/0:24,0:23:57.03:0,57,1216	0/0:10,0:10:11.93:0,12,317	0/0:26,0:25:68.96:0,69,1336	0/0:12,0:12:29.06:0,29,476	0/0:18,0:18:47.85:0,48,911	0/1:11,0:11:0:0,0,0	1/1:16,1:16:12.86:153,13,0	1/1:11,2:12:20.97:344,21,0	1/1:18,1:19:17.06:534,17,0	0/0:17,0:11:33.04:0,33,549	0/0:11,0:10:14.41:0,14,334	0/0:138,0:134:99:0,303,6403	0/0:10,0:10:20.91:0,21,356	0/0:13,0:12:14.84:0,15,181	0/0:70,0:69:99:0,161,3628	0/1:19,0:18:0.10:0,0,0	0/0:22,0:20:53.84:0,54,1223	0/0:8,0:6:14.99:0,15,303	0/0:11,0:11:20.05:0,20,314
chr10	95720547	.	ACACAC	A	429.78	PASS	AB=0.941;AC=7;AF=0.125;AN=56;BaseQRankSum=9.412;DP=661;FS=21.893;HRun=0;HaplotypeScore=183.9989;InbreedingCoeff=0.0828;MQ=49.84;MQ0=21;MQRankSum=-4.592;QD=4.72;ReadPosRankSum=4.584;VQSLOD=0.7825;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:17:3.01:0,3,39	0/0:4,0:4:3.88:0,4,27	0/0:22,0:8:19.28:0,19,315	0/0:36,0:9:22.58:0,23,331	0/0:10,0:10:3.01:0,3,42	0/0:15,0:15:25.77:0,26,310	0/0:33,0:33:50.57:0,51,613	0/0:29,0:23:62.69:0,63,896	0/1:18,1:18:54.20:107,0,54	0/0:24,0:24:68.17:0,68,955	0/0:10,0:10:11.93:0,12,154	0/0:27,0:26:78.21:0,78,1055	0/0:12,0:12:30.07:0,30,392	0/0:17,0:17:48.16:0,48,663	0/1:10,1:11:0:0,0,0	0/1:15,1:15:24.73:111,0,25	0/1:13,0:12:61.33:61,0,86	0/1:15,2:17:59.25:257,0,59	0/0:17,0:13:39.10:0,39,542	0/0:11,0:10:13.97:0,14,200	0/0:147,0:143:99:0,321,4456	0/0:11,0:11:15.89:0,16,218	0/0:14,0:13:15.04:0,15,181	0/0:70,0:69:99:0,175,2337	1/1:15,0:14:0.80:2,1,0	0/0:23,0:21:55.79:0,56,684	0/0:7,0:6:14.30:0,14,137	0/0:11,0:11:21.07:0,21,314
chr10	95720549	.	ACAC	A	411.16	PASS	AB=0.636;AC=10;AF=0.179;AN=56;BaseQRankSum=9.282;DP=653;FS=11.940;HRun=0;HaplotypeScore=163.8186;InbreedingCoeff=0.6137;MQ=50.02;MQ0=19;MQRankSum=-4.524;QD=4.84;ReadPosRankSum=3.586;VQSLOD=2.0486;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,5:17:0:0,0,0	0/0:0,3:3:0.47:0,0,1	0/0:22,0:8:20.41:0,20,313	0/0:35,0:10:20.07:0,20,317	0/0:4,6:10:3.01:0,3,41	0/0:14,0:14:16.42:0,16,170	0/0:35,0:35:42.75:0,43,403	0/0:30,0:24:57.69:0,58,631	1/1:6,13:18:13.54:103,14,0	0/0:23,0:23:54.65:0,55,520	0/0:10,0:10:10.93:0,11,50	0/0:26,0:25:72.17:0,72,641	0/0:12,0:12:29.17:0,29,270	0/0:18,0:18:48.77:0,49,400	0/1:3,7:10:0:0,0,0	1/1:5,10:14:12.78:114,13,0	0/1:7,6:12:15.12:59,0,15	1/1:7,8:15:3.65:264,4,0	0/0:17,0:13:37.64:0,38,363	0/0:11,0:10:8.84:0,9,116	0/0:145,0:142:99:0,268,2701	0/0:11,0:11:6.24:0,6,126	0/0:13,0:12:14.31:0,14,112	0/0:70,0:69:99:0,165,1271	1/1:9,4:12:0.85:2,1,0	0/0:24,0:22:42.81:0,43,400	0/0:7,0:6:12.27:0,12,51	0/0:11,0:11:20.62:0,21,218
chr10	95720551	.	ACG	A	3192.40	PASS	AB=0.967;AC=31;AF=0.554;AN=56;BaseQRankSum=11.030;DP=635;FS=70.951;HRun=0;HaplotypeScore=136.0487;InbreedingCoeff=-0.2340;MQ=51.12;MQ0=18;MQRankSum=2.249;QD=5.56;ReadPosRankSum=11.419;VQSLOD=-0.3947;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,2:14:0:0,0,0	0/0:3,0:3:0.36:0,0,1	0/0:23,0:8:21.97:0,22,198	0/0:35,0:11:10.86:0,11,193	0/1:8,2:10:0:0,0,0	0/1:14,0:14:39.53:56,0,40	0/1:35,0:35:99:138,0,164	0/1:28,0:22:26.58:27,0,222	1/1:17,0:16:14.43:105,14,0	0/1:20,1:21:89.81:164,0,90	1/1:9,0:9:11.27:58,11,0	0/1:27,1:27:99:244,0,159	0/1:12,0:12:52.98:104,0,53	0/1:16,0:16:63.77:114,0,64	0/1:10,0:10:0:0,0,0	1/1:12,0:12:12.33:81,12,0	1/1:13,0:12:14.96:139,15,0	1/1:13,0:13:32.47:217,32,0	0/1:17,0:13:71.19:86,0,71	0/1:10,1:10:17.07:61,0,17	0/1:143,3:142:99:691,0,766	0/1:10,0:10:15.47:91,0,15	0/1:13,0:12:20.10:54,0,20	0/1:66,2:67:99:523,0,236	0/1:12,0:12:0:0,0,0	0/1:22,2:22:56.95:241,0,57	1/1:7,0:6:14.67:104,15,0	0/1:10,0:10:30.12:47,0,30
chr10	95720553	.	GCAC	G	456.60	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=8.906;DP=630;FS=21.160;HRun=0;HaplotypeScore=155.8325;InbreedingCoeff=0.7899;MQ=52.38;MQ0=16;MQRankSum=-7.278;QD=7.49;ReadPosRankSum=1.295;VQSLOD=1.7903;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,5:11:0.47:0,0,1	0/0:0,3:3:0.47:0,0,1	0/0:21,0:9:6.93:0,7,433	0/0:36,0:13:8.44:0,8,449	./.	0/0:14,0:14:26.82:0,27,426	0/0:37,0:37:71.57:0,72,1175	0/0:29,0:24:66.12:0,66,1214	1/1:2,15:16:14.20:111,14,0	0/0:20,0:20:59.98:0,60,1034	0/0:9,0:9:11.94:0,12,216	0/0:28,0:27:81.24:0,81,1445	0/0:13,0:13:33.09:0,33,521	0/0:17,0:17:51.17:0,51,933	0/0:2,8:10:0.34:0,0,1	1/1:1,11:12:12.82:125,13,0	1/1:2,6:7:8.82:67,9,0	1/1:3,10:13:22.97:298,23,0	0/0:17,0:13:39.13:0,39,687	0/0:10,0:9:17.78:0,18,252	0/0:146,0:142:99:0,347,6105	0/0:8,0:8:17.56:0,18,180	0/0:13,0:12:15.05:0,15,252	0/0:67,0:66:99:0,166,2964	1/1:6,5:10:0.86:2,1,0	0/0:28,0:26:63.74:0,64,1210	0/0:8,0:7:17.84:0,18,235	0/0:10,0:10:18.06:0,18,313
chr10	95720610	.	C	CAGAGA	433.91	PASS	AB=0.808;AC=12;AF=0.240;AN=50;BaseQRankSum=7.049;DP=622;FS=1.916;HRun=0;HaplotypeScore=166.4953;InbreedingCoeff=0.6005;MQ=62.09;MQ0=26;MQRankSum=-2.868;QD=6.57;ReadPosRankSum=-3.406;VQSLOD=2.0202;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,4:8:2.04:6,2,0	./.	0/0:43,0:10:27.09:0,27,506	0/1:37,0:18:19.73:20,0,254	./.	0/0:13,0:14:19.74:0,20,495	0/0:40,0:40:99:0,99,2122	0/0:34,0:31:93.28:0,93,1877	1/1:1,1:2:3.01:83,3,0	0/0:27,0:25:69.23:0,69,1322	0/0:8,0:7:12.04:0,12,238	0/0:35,0:34:80.34:0,80,1658	0/0:17,0:17:39.12:0,39,647	0/0:30,0:29:78.26:0,78,1425	1/1:0,5:4:6.02:172,6,0	1/1:1,0:2:3.01:47,3,0	0/1:3,3:7:4.60:179,0,5	1/1:1,0:3:6.01:65,6,0	0/0:31,0:22:51.37:0,51,1038	0/0:6,0:6:15.05:0,15,295	0/0:133,0:132:99:0,321,6849	0/0:10,0:8:17.71:0,18,334	0/0:10,0:10:15.02:0,15,272	0/0:55,0:54:99:0,135,2646	./.	0/0:28,0:26:61.42:0,61,1238	0/0:10,0:11:9.85:0,10,427	0/0:15,0:14:17.82:0,18,346
chr10	95720611	.	C	CAGAG	351.85	PASS	AB=0.864;AC=12;AF=0.231;AN=52;BaseQRankSum=7.081;DP=625;FS=3.383;HRun=0;HaplotypeScore=163.2829;InbreedingCoeff=0.6109;MQ=60.79;MQ0=26;MQRankSum=-2.939;QD=8.80;ReadPosRankSum=-1.647;VQSLOD=2.8181;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,4:9:5.75:51,6,0	./.	0/0:43,0:10:26.96:0,27,352	0/0:36,0:17:8.25:0,8,215	./.	0/0:15,0:15:29.73:0,30,412	0/0:41,0:40:91.55:0,92,1694	0/0:33,0:30:90.29:0,90,1439	1/1:1,1:2:3.01:67,3,0	0/0:26,0:24:66.20:0,66,1005	0/0:8,0:7:12.03:0,12,184	0/0:35,0:34:75.95:0,76,1185	0/0:16,0:16:36.09:0,36,474	0/0:30,0:29:73.83:0,74,971	1/1:0,5:4:6.02:133,6,0	1/1:3,0:3:3.01:43,3,0	0/1:5,3:7:12.62:133,0,13	0/1:5,0:5:3.73:32,0,4	0/0:32,0:23:62.15:0,62,922	0/0:6,0:6:15:0,15,216	0/0:134,0:130:99:0,324,5253	0/0:10,0:8:15.04:0,15,222	0/0:8,0:8:12.02:0,12,165	0/0:54,0:53:99:0,138,2087	1/1:7,0:5:3.01:37,3,0	0/0:29,0:26:55.46:0,55,956	0/0:11,0:11:11.54:0,12,271	0/0:15,0:14:20.84:0,21,262
chr10	95720655	.	A	AAC	3503.57	PASS	AB=0.818;AC=18;AF=0.321;AN=56;BaseQRankSum=0.736;DP=805;FS=0.426;HRun=0;HaplotypeScore=191.9492;InbreedingCoeff=0.7943;MQ=53.41;MQ0=20;MQRankSum=-4.088;QD=14.48;ReadPosRankSum=-3.481;VQSLOD=2.9418;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,20:40:41.98:608,42,0	1/1:2,7:9:14.97:176,15,0	0/0:32,0:9:13.26:0,13,180	0/0:21,0:4:1.19:0,1,35	1/1:9,8:17:14.31:246,14,0	0/0:22,0:22:53.99:0,54,571	0/0:40,0:40:93.74:0,94,1136	0/0:23,0:20:51.11:0,51,610	1/1:3,20:24:22.31:353,22,0	0/0:43,0:42:99:0,108,1306	0/1:7,0:7:10.83:11,0,135	0/0:42,0:41:90.09:0,90,1063	0/0:16,0:16:29.35:0,29,312	0/0:38,0:36:60.32:0,60,691	0/1:9,11:20:9.28:9,0,15	1/1:4,20:22:21.07:342,21,0	1/1:6,26:35:45.94:674,46,0	1/1:16,12:29:59.43:817,59,0	0/0:19,0:14:39.03:0,39,424	0/0:8,0:7:21.03:0,21,246	0/0:114,0:110:99:0,179,2763	0/0:20,0:20:39.04:0,39,471	0/0:7,0:7:15.04:0,15,177	0/0:59,0:57:99:0,102,1422	1/1:11,13:23:18.48:268,18,0	0/0:37,0:35:21.70:0,22,817	0/0:10,1:11:29.32:0,29,350	0/0:8,0:7:8.36:0,8,144
chr10	95720778	.	C	CAT	1668.43	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=7.358;DP=638;FS=48.919;HRun=0;HaplotypeScore=124.8888;InbreedingCoeff=0.8398;MQ=49.43;MQ0=21;MQRankSum=-1.157;QD=15.45;ReadPosRankSum=-3.054;VQSLOD=1.2194;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,8:12:14.92:251,15,0	1/1:5,0:5:2.39:47,2,0	0/0:42,0:3:5.88:0,6,37	0/0:30,0:5:9.11:0,9,132	1/1:5,1:6:9.01:132,9,0	0/0:20,0:20:45.14:0,45,664	0/0:41,0:41:99:0,108,1402	0/0:17,0:17:48.07:0,48,624	1/1:13,4:17:5.82:42,6,0	0/0:24,0:23:69.20:0,69,977	0/0:3,0:3:2.99:0,3,24	0/0:34,0:34:60.14:0,60,828	0/0:13,0:13:39.10:0,39,549	0/0:43,0:43:99:0,99,1383	1/1:10,4:14:14.73:230,15,0	1/1:5,3:8:8.75:112,9,0	1/1:13,9:22:44.18:557,44,0	1/1:11,1:11:30.03:384,30,0	0/0:19,0:14:36.10:0,36,489	0/0:6,0:6:6.02:0,6,92	0/0:125,0:121:99:0,285,3818	0/0:14,0:13:21.02:0,21,292	0/0:9,0:8:9.03:0,9,132	0/0:38,0:36:99:0,99,1367	1/1:9,3:11:8.91:107,9,0	0/0:29,0:26:68.99:0,69,866	0/0:15,0:15:30.10:0,30,445	0/0:8,0:8:21.05:0,21,299
chr10	95720793	.	GCACACA	G	280.30	PASS	AB=0.783;AC=14;AF=0.250;AN=56;BaseQRankSum=7.435;DP=623;FS=54.930;HRun=0;HaplotypeScore=160.1746;InbreedingCoeff=0.6094;MQ=48.50;MQ0=17;MQRankSum=-3.201;QD=3.79;ReadPosRankSum=-0.946;VQSLOD=0.5428;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:8:10.95:52,11,0	0/0:3,0:3:0:0,0,0	0/0:32,0:3:9.02:0,9,190	0/0:28,0:4:11.99:0,12,223	1/1:7,0:7:2.80:13,3,0	0/0:21,0:21:48.15:0,48,1264	0/0:28,0:28:72.12:0,72,1547	0/0:21,0:21:60.19:0,60,1428	1/1:8,0:8:5.35:42,5,0	0/0:32,0:31:91.48:0,91,2500	0/0:5,0:5:6.02:0,6,183	0/0:44,0:44:64.98:0,65,1997	0/0:14,0:14:36.03:0,36,1029	0/0:41,0:42:93.14:0,93,2360	1/1:8,0:8:1.86:8,2,0	1/1:7,0:7:2.16:8,2,0	0/1:11,2:13:5.15:126,0,5	0/1:4,3:6:4.91:166,0,5	0/0:13,0:8:21.01:0,21,307	0/0:13,0:13:15.04:0,15,431	0/0:121,0:117:99:0,262,7246	0/0:20,0:19:30.01:0,30,714	0/0:14,0:12:9.03:0,9,211	0/0:40,0:38:93.31:0,93,3040	1/1:11,4:14:2.46:11,2,0	0/0:30,0:28:75.19:0,75,2215	0/0:16,0:16:35.80:0,36,841	0/0:11,0:11:27.07:0,27,614
chr10	95720834	.	CAG	C	35.04	PASS	AB=0.789;AC=4;AF=0.077;AN=52;BaseQRankSum=1.742;DP=677;FS=22.274;HRun=0;HaplotypeScore=161.5895;InbreedingCoeff=0.3285;MQ=51.49;MQ0=18;MQRankSum=-0.565;QD=1.52;ReadPosRankSum=-2.767;VQSLOD=0.2136;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,1:9:2.99:0,3,24	./.	0/0:23,0:6:18.01:0,18,258	0/0:41,0:18:42.82:0,43,586	./.	0/0:24,0:23:43:0,43,407	0/0:31,0:30:23.87:0,24,587	0/0:32,0:28:81.06:0,81,1174	1/1:4,4:7:3.87:25,4,0	0/0:43,0:41:24.42:0,24,684	0/0:10,0:10:15:0,15,136	0/0:51,0:51:53.78:0,54,517	0/0:15,0:14:23.10:0,23,176	0/0:36,0:35:71.49:0,71,683	0/1:5,2:6:0:0,0,0	0/0:4,0:4:5.99:0,6,52	0/0:5,2:6:3.59:0,4,37	0/1:6,2:7:34.40:100,0,34	0/0:21,0:14:34.95:0,35,304	0/0:11,0:11:6.01:0,6,64	0/0:121,0:115:99:0,172,2128	0/0:21,0:21:24.02:0,24,234	0/0:13,0:12:9.02:0,9,90	0/0:48,0:47:99:0,121,1127	0/0:15,1:16:2.58:0,3,18	0/0:39,0:37:30.99:0,31,692	0/0:17,0:17:19.86:0,20,193	0/0:10,0:10:24.08:0,24,442
chr10	95720836	.	G	GACAC	17883.44	PASS	AB=0.783;AC=42;AF=0.808;AN=52;BaseQRankSum=-2.529;DP=691;FS=4.102;HRun=0;HaplotypeScore=122.0371;InbreedingCoeff=0.7437;MQ=51.63;MQ0=20;MQRankSum=4.388;QD=30.99;ReadPosRankSum=2.264;VQSLOD=4.4209;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:9:0:0,0,0	./.	0/0:23,0:5:12.04:0,12,168	0/0:41,0:18:25.83:0,26,391	./.	1/1:16,5:22:44.79:887,45,0	1/1:21,10:30:62.29:1276,62,0	0/0:32,0:28:51.02:0,51,716	1/1:8,0:7:0.54:3,1,0	1/1:34,5:39:95.86:1468,96,0	1/1:7,3:10:15:225,15,0	1/1:5,48:56:42.06:1066,42,0	1/1:15,2:16:30.04:515,30,0	1/1:18,16:33:72.14:1600,72,0	0/1:4,0:6:0:0,0,0	1/1:3,0:4:5.77:33,6,0	1/1:6,0:6:2.55:15,3,0	1/1:6,0:7:10.04:39,10,0	1/1:19,3:15:30.04:510,30,0	1/1:5,5:11:6:100,6,0	1/1:84,34:117:99:4944,248,0	1/1:3,18:23:18.05:457,18,0	1/1:3,10:13:9.03:228,9,0	1/1:34,14:48:99:2565,117,0	1/1:14,0:16:5.99:50,6,0	1/1:6,33:38:92.88:1574,93,0	1/1:1,16:17:15.03:327,15,0	0/0:10,0:10:24.08:0,24,389
chr10	95720866	.	CAG	C	258.67	PASS	AB=0.735;AC=9;AF=0.180;AN=50;BaseQRankSum=5.479;DP=676;FS=16.707;HRun=0;HaplotypeScore=158.7429;InbreedingCoeff=0.4558;MQ=54.72;MQ0=29;MQRankSum=-2.910;QD=3.40;ReadPosRankSum=-1.803;VQSLOD=1.5409;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,7:16:2.60:32,3,0	./.	0/0:32,1:11:14.52:0,15,397	0/0:49,1:20:32.36:0,32,466	./.	0/0:20,0:19:39.74:0,40,696	0/0:30,0:29:60.13:0,60,973	0/0:29,0:26:75.13:0,75,1239	1/1:9,6:13:8.69:120,9,0	0/0:35,0:33:93.22:0,93,1518	0/0:13,0:13:15.05:0,15,279	0/0:48,0:48:60.13:0,60,966	0/0:12,0:11:27.09:0,27,510	0/0:27,0:27:75.19:0,75,1279	./.	0/1:5,3:8:15.27:96,0,15	0/1:4,3:6:21.45:64,0,21	0/1:5,2:6:54.23:54,0,95	0/0:15,0:11:33.11:0,33,609	0/0:16,0:14:18.06:0,18,316	0/0:111,0:106:99:0,241,4442	0/0:22,0:19:20.41:0,20,311	0/0:13,0:12:12.03:0,12,197	0/0:50,0:49:99:0,126,2211	1/1:8,4:11:5.05:27,5,0	0/0:32,0:30:78.19:0,78,1377	0/0:14,0:14:24.03:0,24,400	0/0:15,0:15:36:0,36,583
chr10	95720868	.	GAC	G	105.48	PASS	AB=1.000;AC=9;AF=0.180;AN=50;BaseQRankSum=5.459;DP=679;FS=12.164;HRun=0;HaplotypeScore=151.7960;InbreedingCoeff=0.4328;MQ=54.44;MQ0=33;MQRankSum=-3.595;QD=1.39;ReadPosRankSum=-2.055;VQSLOD=1.4271;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,4:16:2.83:14,3,0	./.	0/0:34,0:11:2.07:0,2,317	0/0:48,2:19:22.95:0,23,377	./.	0/0:20,0:20:43.11:0,43,634	0/0:27,0:26:45.08:0,45,727	0/0:29,0:25:63.19:0,63,983	1/1:11,1:12:8.72:66,9,0	0/0:36,0:34:86.88:0,87,1282	0/0:12,0:12:15.04:0,15,224	0/0:48,0:48:54.05:0,54,793	0/0:14,0:13:33.07:0,33,506	0/0:27,0:27:69.24:0,69,1146	./.	0/1:7,0:8:15.01:42,0,15	0/1:7,0:8:22.01:26,0,22	0/1:6,0:6:12.35:12,0,77	0/0:17,0:12:36.04:0,36,522	0/0:16,0:14:17.79:0,18,299	0/0:107,1:104:99:0,201,3765	0/0:22,0:19:18.05:0,18,261	0/0:13,0:12:9.03:0,9,147	0/0:48,0:48:99:0,114,1841	1/1:9,3:11:6.02:78,6,0	0/0:33,0:31:78.17:0,78,1179	0/0:13,0:13:21.02:0,21,324	0/0:15,0:15:27.09:0,27,458
chr10	95720906	.	G	GAC	10454.99	PASS	AB=0.720;AC=30;AF=0.577;AN=52;BaseQRankSum=-6.735;DP=685;FS=11.069;HRun=0;HaplotypeScore=100.1970;InbreedingCoeff=0.3981;MQ=51.84;MQ0=34;MQRankSum=5.842;QD=19.58;ReadPosRankSum=0.484;VQSLOD=4.7699;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:1.79:0,2,5	./.	0/0:22,0:6:6.01:0,6,73	0/0:54,0:15:4.79:0,5,71	./.	0/1:6,19:25:0.67:452,0,1	1/1:8,28:33:40.90:720,41,0	1/1:19,12:21:30.55:447,31,0	0/0:14,0:11:9:0,9,81	0/1:14,22:32:0.97:879,0,1	1/1:2,10:13:9.03:141,9,0	1/1:26,12:37:51.16:785,51,0	0/1:4,15:19:3.29:451,0,3	1/1:14,10:24:44.49:657,44,0	0/1:19,0:19:0:0,0,0	0/0:13,0:12:8.94:0,9,72	0/0:8,0:9:5.83:0,6,102	0/0:9,0:9:14.50:0,15,100	1/1:9,5:10:18.06:272,18,0	0/1:3,12:15:17.37:224,0,17	0/1:71,39:109:57.52:2451,0,58	0/1:11,6:16:76.38:190,0,76	1/1:12,2:11:2.91:48,3,0	1/1:27,24:49:93.32:1470,93,0	0/1:17,0:16:0:0,0,0	1/1:18,7:24:13.26:592,13,0	1/1:10,6:16:33.07:493,33,0	1/1:3,8:11:6:185,6,0
chr10	95720924	.	GACAC	G	110.83	PASS	AB=0.903;AC=5;AF=0.096;AN=52;BaseQRankSum=5.098;DP=732;FS=10.656;HRun=0;HaplotypeScore=162.8294;InbreedingCoeff=0.3102;MQ=50.03;MQ0=30;MQRankSum=-4.401;QD=1.94;ReadPosRankSum=-1.188;VQSLOD=2.0128;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,1:17:2.93:51,3,0	./.	0/0:29,0:7:15.02:0,15,221	0/0:61,0:17:30.39:0,30,442	./.	0/0:28,0:27:45.11:0,45,1013	0/0:42,0:39:78.26:0,78,1709	0/0:26,0:23:66.63:0,67,1144	0/0:12,0:11:13.21:0,13,217	0/0:36,0:32:95.81:0,96,1958	0/0:14,0:13:12.04:0,12,260	0/0:34,0:33:72.25:0,72,1553	0/0:20,0:20:45.14:0,45,923	0/0:31,0:31:78.65:0,79,1432	0/1:20,0:20:0.02:0,0,0	0/0:12,0:11:11.90:0,12,136	0/1:9,1:10:48.75:49,0,257	0/1:6,2:8:99:112,0,127	0/0:17,0:11:33.02:0,33,643	0/0:16,0:16:20.62:0,21,457	0/0:124,0:122:99:0,259,5282	0/0:24,0:22:33.08:0,33,632	0/0:18,0:15:17.93:0,18,310	0/0:48,0:47:99:0,110,2329	0/0:19,0:19:3.02:0,3,33	0/0:27,0:27:69.23:0,69,1458	0/0:17,0:16:48.16:0,48,1012	0/0:12,0:12:15.67:0,16,303
chr10	95720946	.	GGC	G	152.13	PASS	AB=0.883;AC=6;AF=0.107;AN=56;BaseQRankSum=5.890;DP=720;FS=8.514;HRun=0;HaplotypeScore=136.6232;InbreedingCoeff=0.3581;MQ=53.03;MQ0=35;MQRankSum=-3.938;QD=2.93;ReadPosRankSum=1.203;VQSLOD=1.8771;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,4:10:3.90:53,4,0	0/0:4,0:4:2.68:0,3,11	0/0:37,0:7:21.06:0,21,315	0/0:60,0:17:18.53:0,19,347	0/1:10,0:10:0:0,0,0	0/0:31,0:30:66.17:0,66,1198	0/0:48,1:45:89.52:0,90,1847	0/0:34,0:33:88.51:0,89,1715	0/0:7,0:7:12.03:0,12,206	0/0:39,1:39:77.58:0,78,2075	0/0:12,0:11:15.05:0,15,304	0/0:32,0:32:90.29:0,90,1751	0/0:18,0:18:45.15:0,45,897	0/0:34,0:34:96.33:0,96,1904	0/1:14,1:15:0:0,0,0	0/0:10,0:9:6.01:0,6,94	0/1:5,2:7:91.11:91,0,164	0/1:7,2:9:63.39:110,0,63	0/0:21,0:12:36.09:0,36,675	0/0:11,0:11:29.97:0,30,552	0/0:115,0:114:99:0,277,5493	0/0:23,0:22:42.14:0,42,843	0/0:10,0:9:15.03:0,15,305	0/0:46,0:45:99:0,119,2371	0/0:18,0:19:10.01:0,10,113	0/0:28,0:27:78.27:0,78,1551	0/0:16,0:15:45.15:0,45,899	0/0:10,0:10:23.11:0,23,368
chr10	95720952	.	CAG	C	45.67	PASS	AB=0.907;AC=5;AF=0.093;AN=54;BaseQRankSum=5.210;DP=737;FS=7.806;HRun=0;HaplotypeScore=138.4860;InbreedingCoeff=0.2454;MQ=52.73;MQ0=37;MQRankSum=-2.567;QD=1.09;ReadPosRankSum=1.746;VQSLOD=2.0260;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,1:9:1.05:33,1,0	0/0:4,0:4:2.88:0,3,16	0/0:37,0:8:20.96:0,21,279	0/0:62,0:20:26.74:0,27,252	./.	0/0:31,0:30:21.28:0,21,916	0/0:54,0:50:81.53:0,82,1527	0/0:35,0:32:87.08:0,87,1427	0/0:7,0:7:11.63:0,12,66	0/0:38,0:37:98.89:0,99,1793	0/0:13,0:11:15.02:0,15,223	0/0:34,0:34:93.23:0,93,1589	0/0:19,0:19:48.12:0,48,820	0/0:37,0:37:99:0,105,1722	0/1:14,0:14:0:0,0,0	0/0:10,0:9:2.89:0,3,16	0/1:6,1:7:36.47:36,0,58	0/1:9,2:10:45.99:75,0,46	0/0:22,0:11:33.05:0,33,498	0/0:10,0:10:24.04:0,24,352	0/0:118,2:119:99:0,187,4401	0/0:23,0:22:42.10:0,42,707	0/0:10,0:9:15.03:0,15,289	0/0:44,0:43:99:0,111,1947	0/0:17,0:17:4.58:0,5,35	0/0:29,0:28:78.23:0,78,1287	0/0:16,0:15:42.14:0,42,759	0/0:12,0:12:19.21:0,19,469
chr10	95720954	.	GACACACACAC	G	842.35	PASS	AB=0.897;AC=11;AF=0.204;AN=54;BaseQRankSum=6.269;DP=750;FS=11.216;HRun=0;HaplotypeScore=217.2751;InbreedingCoeff=0.5480;MQ=52.71;MQ0=38;MQRankSum=-5.490;QD=13.16;ReadPosRankSum=0.178;VQSLOD=1.5720;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,2:9:29.47:65,0,29	1/1:2,2:4:6.02:134,6,0	0/0:38,0:10:26.35:0,26,395	0/0:63,0:19:33.63:0,34,622	./.	0/0:29,0:29:59.65:0,60,1991	0/0:53,0:50:99:0,105,3543	0/0:36,0:32:87.17:0,87,2885	1/1:3,3:6:8.94:193,9,0	0/0:39,0:38:99:0,114,4156	0/0:12,0:10:18.05:0,18,535	0/0:34,0:34:90.24:0,90,3633	0/0:21,0:21:51.15:0,51,1829	0/0:39,0:39:99:0,108,4132	0/0:2,11:13:0:0,0,0	1/1:0,9:8:2.91:75,3,0	0/1:6,0:6:40.82:41,0,127	0/1:10,2:10:80.18:175,0,80	0/0:24,0:13:38.46:0,38,982	0/0:9,0:9:24.04:0,24,659	0/0:123,0:122:99:0,281,9954	0/0:26,0:25:51.15:0,51,1806	0/0:12,0:11:17.66:0,18,813	0/0:42,0:41:99:0,108,3995	1/1:6,11:17:15.52:312,16,0	0/0:30,0:29:81.21:0,81,2365	0/0:16,0:15:42.09:0,42,1537	0/0:12,0:12:30.10:0,30,1145
chr10	95720976	.	CACACACAG	C	339.54	PASS	AB=0.937;AC=13;AF=0.241;AN=54;BaseQRankSum=6.864;DP=743;FS=27.428;HRun=0;HaplotypeScore=180.1675;InbreedingCoeff=0.5075;MQ=48.18;MQ0=40;MQRankSum=-6.506;QD=2.50;ReadPosRankSum=-2.511;VQSLOD=1.0336;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,1:7:3.74:20,4,0	0/1:5,0:5:14.91:15,0,16	0/0:55,0:6:9.42:0,9,248	0/1:72,0:12:0.96:1,0,510	./.	0/0:25,0:23:41.41:0,41,1304	0/0:49,0:48:99:0,119,3465	0/0:40,0:35:80.36:0,80,2235	1/1:4,0:4:5.93:40,6,0	0/0:41,0:40:99:0,108,3169	0/0:8,0:6:12.03:0,12,252	0/0:37,0:37:93.32:0,93,3253	0/0:20,0:19:41.80:0,42,1366	0/0:41,0:41:99:0,99,3661	0/1:10,1:11:0:0,0,0	1/1:7,0:6:2.97:20,3,0	1/1:3,2:4:6:19,6,0	0/1:7,3:8:17.97:322,0,18	0/0:20,0:12:29.93:0,30,853	0/0:9,0:9:21.07:0,21,572	0/0:116,0:115:99:0,222,8246	0/0:24,0:24:45.52:0,46,1454	0/0:14,0:12:24.07:0,24,671	0/0:40,0:39:99:0,99,3134	0/1:14,0:14:1.59:44,0,2	0/0:30,0:29:63.80:0,64,1580	0/0:16,0:16:42.14:0,42,1427	0/0:10,0:10:27.09:0,27,859
chr10	95720994	.	C	CCACA	929.96	PASS	AB=0.963;AC=10;AF=0.192;AN=52;BaseQRankSum=-1.362;DP=713;FS=6.599;HRun=0;HaplotypeScore=137.5678;InbreedingCoeff=0.5712;MQ=46.07;MQ0=33;MQRankSum=-4.950;QD=10.57;ReadPosRankSum=-2.649;VQSLOD=2.2949;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:7:0:0,0,0	0/0:4,0:4:1.93:0,2,6	0/0:66,0:4:3.01:0,3,31	0/0:67,0:8:2.80:0,3,13	./.	0/0:22,0:21:39.12:0,39,616	0/0:46,0:46:77.60:0,78,1407	1/1:17,15:30:40.04:678,40,0	0/1:3,0:3:0:0,0,0	0/0:36,0:36:64.93:0,65,923	0/0:3,0:2:6.02:0,6,102	0/0:42,0:43:81.18:0,81,1223	0/0:19,0:18:33.07:0,33,479	0/0:42,0:42:51.18:0,51,1291	0/1:7,0:7:0:0,0,0	0/1:4,0:3:0:0,0,0	./.	0/1:8,0:6:9.32:9,0,73	0/0:14,0:12:16.05:0,16,302	0/0:8,0:8:21.07:0,21,356	0/0:119,0:118:99:0,222,3553	0/0:23,0:23:30.09:0,30,471	0/0:14,0:12:22.29:0,22,301	0/0:40,0:40:75.18:0,75,1206	0/1:16,0:14:0.02:0,0,0	0/0:30,0:30:45.13:0,45,699	0/0:17,0:18:26.33:0,26,429	1/1:5,3:10:20.83:361,21,0
chr10	95721012	.	ACGCG	A	51.22	PASS	AB=0.929;AC=4;AF=0.087;AN=46;BaseQRankSum=2.971;DP=590;FS=0.000;HRun=0;HaplotypeScore=128.1006;InbreedingCoeff=0.4656;MQ=48.38;MQ0=19;MQRankSum=-3.855;QD=4.27;ReadPosRankSum=-0.423;VQSLOD=1.8465;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:3,1:4:0:0,0,0	1/1:1,3:4:2.90:56,3,0	0/0:37,0:1:2.98:0,3,22	./.	./.	0/0:21,0:21:35.40:0,35,860	0/0:50,0:50:99:0,125,2686	0/0:17,0:14:15.12:0,15,322	./.	0/0:29,0:29:75.24:0,75,1675	0/0:4,0:4:12.04:0,12,227	0/0:43,0:43:84.73:0,85,1927	0/0:19,0:18:37.33:0,37,819	0/0:40,0:40:87.25:0,87,1957	./.	0/1:2,0:2:0:0,0,0	./.	0/1:5,1:5:8.17:83,0,8	0/0:14,0:11:27.01:0,27,577	0/0:10,0:10:27.09:0,27,655	0/0:112,0:111:99:0,271,6063	0/0:17,0:17:31.91:0,32,686	0/0:11,0:10:18.06:0,18,445	0/0:39,0:39:93.73:0,94,2048	0/0:6,4:9:0.47:0,0,1	0/0:31,0:30:75.14:0,75,1412	0/0:16,0:16:3.18:0,3,648	0/0:9,0:9:18.02:0,18,273
chr10	95721030	.	ACGCG	A	122.54	PASS	AB=0.933;AC=9;AF=0.188;AN=48;BaseQRankSum=4.364;DP=568;FS=2.664;HRun=0;HaplotypeScore=134.1860;InbreedingCoeff=0.4715;MQ=49.03;MQ0=9;MQRankSum=-4.974;QD=2.31;ReadPosRankSum=-0.590;VQSLOD=2.4765;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:0:0,0,0	1/1:8,0:7:1.43:23,1,0	0/0:10,0:1:3.01:0,3,83	0/0:16,0:1:3:0,3,26	./.	0/0:19,0:19:26.37:0,26,645	0/0:49,0:49:99:0,114,2621	0/1:15,0:11:99:120,0,183	./.	0/0:39,0:39:99:0,102,2179	0/0:7,0:7:21.07:0,21,486	0/0:37,0:37:66.67:0,67,1488	0/0:19,0:18:45.92:0,46,810	0/0:41,0:40:75.19:0,75,1609	./.	0/1:3,1:4:0:0,0,0	./.	1/1:4,0:4:5.22:34,5,0	0/0:16,0:12:26.94:0,27,369	0/0:13,0:13:27.09:0,27,656	0/0:102,0:98:99:0,238,5758	0/0:22,0:22:48.14:0,48,1076	0/0:12,0:11:27.09:0,27,700	0/0:46,0:46:99:0,106,2379	0/0:7,1:8:0.47:0,0,1	0/0:42,0:38:99:0,102,2030	0/1:16,0:16:7.26:7,0,538	1/1:6,0:5:5.98:56,6,0
chr10	95721046	.	GCA	G	35.20	PASS	AB=0.919;AC=17;AF=0.327;AN=52;BaseQRankSum=4.665;DP=656;FS=6.721;HRun=0;HaplotypeScore=113.5406;InbreedingCoeff=0.3085;MQ=48.01;MQ0=16;MQRankSum=-2.356;QD=0.20;ReadPosRankSum=-0.741;VQSLOD=1.4341;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:0:0,0,0	0/0:8,1:8:3.44:0,3,21	./.	0/0:35,0:3:9.03:0,9,127	1/1:15,1:13:3:25,3,0	0/0:20,0:20:26.93:0,27,348	0/1:41,3:44:33.47:33,0,950	0/1:14,1:13:7.02:7,0,375	./.	0/0:50,1:50:95.53:0,96,1646	0/1:8,1:9:13.11:13,0,262	0/0:35,0:33:11.31:0,11,589	0/0:21,0:18:34.46:0,34,495	0/1:39,1:39:6.05:6,0,607	1/1:7,0:7:2.89:16,3,0	1/1:6,0:6:2.59:13,3,0	1/1:4,0:4:3.01:30,3,0	1/1:2,1:3:2.68:11,3,0	0/1:15,2:13:10.08:10,0,300	0/0:15,0:15:28.32:0,28,397	0/0:102,2:102:63.94:0,64,2657	0/0:19,1:20:39.04:0,39,576	0/0:20,2:21:42.13:0,42,627	0/0:53,0:51:80.89:0,81,1697	1/1:11,1:12:2.90:16,3,0	0/0:43,1:40:74.06:0,74,1480	0/0:19,0:19:21.33:0,21,412	0/0:3,1:3:3.01:0,3,43
chr10	95721071	.	GAC	G	159.68	PASS	AB=0.924;AC=13;AF=0.241;AN=54;BaseQRankSum=2.977;DP=839;FS=7.481;HRun=0;HaplotypeScore=133.6441;InbreedingCoeff=0.5739;MQ=45.06;MQ0=36;MQRankSum=0.208;QD=1.48;ReadPosRankSum=-0.947;VQSLOD=1.7655;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,1:20:0:0,0,1	0/1:14,1:14:29.93:30,0,41	0/0:47,1:5:12.04:0,12,163	0/0:73,0:6:8.99:0,9,113	1/1:21,1:18:3.01:32,3,0	0/0:17,0:17:30.57:0,31,468	0/0:41,0:41:63.19:0,63,996	0/0:36,0:29:72.06:0,72,1006	./.	0/0:51,0:49:63.99:0,64,1729	0/0:7,0:7:15.02:0,15,198	0/0:33,0:30:39.05:0,39,593	0/0:22,0:19:33.51:0,34,516	0/0:35,0:34:51.04:0,51,740	1/1:5,6:10:9.01:101,9,0	1/1:11,1:12:2.64:20,3,0	0/1:6,1:6:29.64:30,0,37	1/1:2,1:3:0.47:1,0,0	0/0:23,0:15:35.07:0,35,513	0/0:19,1:19:45.13:0,45,701	0/0:125,0:119:99:0,238,3636	0/0:24,0:24:54.14:0,54,817	0/0:23,0:22:48.16:0,48,789	0/0:69,1:66:79.17:0,79,1799	1/1:13,1:14:8.94:87,9,0	0/0:47,0:44:99:0,105,1587	0/0:24,0:24:49.47:0,49,733	0/0:7,0:5:15.05:0,15,245
chr10	95721073	.	C	CAG	424.01	PASS	AB=0.684;AC=12;AF=0.222;AN=54;BaseQRankSum=3.456;DP=856;FS=3.780;HRun=0;HaplotypeScore=140.3782;InbreedingCoeff=0.5897;MQ=44.83;MQ0=39;MQRankSum=-1.757;QD=3.75;ReadPosRankSum=-2.078;VQSLOD=2.5562;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,11:20:0:0,0,0	0/1:4,11:14:31.80:104,0,32	0/0:52,0:5:12.04:0,12,170	0/0:74,0:7:11.98:0,12,136	1/1:10,12:18:4.26:60,4,0	0/0:18,0:17:30.57:0,31,455	0/0:41,0:40:81.04:0,81,1069	0/0:37,0:30:78.16:0,78,1050	./.	0/0:55,0:52:99:0,107,1893	0/0:7,0:7:20.99:0,21,248	0/0:33,0:30:44.69:0,45,593	0/0:20,0:17:31.90:0,32,488	0/0:33,0:32:53.66:0,54,745	1/1:11,1:11:9.03:151,9,0	1/1:5,9:14:3.01:57,3,0	0/1:4,3:6:38.26:48,0,38	0/1:3,1:4:0.04:0,0,0	0/0:25,0:15:31.08:0,31,489	0/0:20,0:19:45.14:0,45,662	0/0:125,0:119:99:0,259,3596	0/0:25,0:25:60.15:0,60,827	0/0:24,0:22:54.14:0,54,773	0/0:71,0:67:99:0,138,1873	1/1:6,10:15:9.03:144,9,0	0/0:46,0:43:99:0,125,1632	0/0:25,0:25:47.07:0,47,685	0/0:7,0:5:15.05:0,15,228
chr10	95721115	.	CCA	C	5710.73	PASS	AB=0.820;AC=43;AF=0.827;AN=52;BaseQRankSum=-1.377;DP=795;FS=7.582;HRun=0;HaplotypeScore=126.9029;InbreedingCoeff=0.3289;MQ=48.77;MQ0=56;MQRankSum=2.527;QD=8.15;ReadPosRankSum=1.653;VQSLOD=4.2891;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:0:0,0,0	0/1:9,0:11:0.14:0,0,0	./.	0/1:73,0:13:0:0,0,0	./.	1/1:7,10:17:29.48:328,29,0	1/1:21,11:31:35.98:420,36,0	0/1:34,1:29:5.78:153,0,6	0/1:0,0:5:0:0,0,0	0/1:25,18:41:30.13:418,0,30	1/1:3,2:5:12.02:128,12,0	1/1:11,10:22:17.54:168,18,0	1/1:12,11:22:31.91:355,32,0	1/1:20,9:30:45.54:480,46,0	0/1:12,0:19:0.02:0,0,0	1/1:7,0:12:4.07:20,4,0	1/1:6,0:5:2.74:12,3,0	1/1:3,0:3:2.60:10,3,0	1/1:17,2:15:11.52:114,12,0	1/1:11,8:18:17.88:189,18,0	1/1:79,34:117:70.70:1058,71,0	1/1:13,7:18:21.05:234,21,0	1/1:11,4:16:7.57:73,8,0	1/1:43,23:67:68.87:735,69,0	0/0:11,0:16:0:0,0,0	1/1:22,6:25:19.19:217,19,0	1/1:17,5:21:29.92:328,30,0	1/1:4,9:13:24.06:270,24,0
chr10	95721140	.	CAG	C	735.39	PASS	AB=0.974;AC=19;AF=0.352;AN=54;BaseQRankSum=2.057;DP=681;FS=25.694;HRun=0;HaplotypeScore=138.1329;InbreedingCoeff=-0.5925;MQ=42.61;MQ0=43;MQRankSum=5.054;QD=1.49;ReadPosRankSum=9.043;VQSLOD=0.1122;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,2:14:6.34:0,6,45	0/0:4,0:5:5.89:0,6,37	0/0:56,0:6:1.26:0,1,54	0/0:63,0:8:0.84:0,1,42	./.	0/1:25,0:24:80.65:81,0,124	0/1:31,0:28:49.82:50,0,154	0/1:26,0:21:24.43:24,0,223	0/1:7,0:7:0.04:0,0,0	0/1:35,0:30:41.24:41,0,327	0/1:10,0:10:10.76:11,0,84	0/1:20,0:19:7.87:8,0,130	0/1:19,0:19:76.56:78,0,77	0/1:27,0:27:59.53:60,0,115	0/0:17,0:17:2.93:0,3,25	0/0:7,0:7:2.87:0,3,15	0/0:4,0:4:5.31:0,5,26	0/1:4,2:5:20.10:20,0,23	0/1:15,1:9:31.39:31,0,53	0/1:15,1:15:20.61:21,0,80	0/1:109,4:107:99:159,0,308	0/1:18,0:16:20.35:20,0,98	0/1:14,0:12:12.52:13,0,59	0/1:46,3:46:38.96:106,0,39	0/0:14,0:14:2.86:0,3,25	0/1:28,1:26:46.50:47,0,317	0/1:21,0:20:43.78:44,0,116	0/1:12,0:12:21.47:61,0,21
chr10	95721166	.	G	GAGAC	1317.86	PASS	AB=1.000;AC=17;AF=0.315;AN=54;BaseQRankSum=0.905;DP=715;FS=26.908;HRun=0;HaplotypeScore=198.8292;InbreedingCoeff=0.8116;MQ=47.43;MQ0=18;MQRankSum=-6.865;QD=9.55;ReadPosRankSum=-0.708;VQSLOD=1.4598;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,7:14:9.17:215,9,0	1/1:2,3:5:2.75:54,3,0	0/0:51,0:12:30:0,30,422	0/1:55,0:22:2.13:2,0,340	./.	0/0:27,0:27:53.37:0,53,921	0/0:30,0:30:54.06:0,54,982	0/0:53,0:51:82.58:0,83,2061	1/1:3,7:10:6.02:161,6,0	0/0:36,0:32:81.17:0,81,1260	0/0:11,0:11:15.05:0,15,284	0/0:34,0:34:56.85:0,57,1015	0/0:22,0:22:51.17:0,51,967	0/0:32,0:32:69.15:0,69,1244	1/1:7,10:19:11.34:250,11,0	1/1:3,6:9:9.03:214,9,0	1/1:0,3:3:6.02:161,6,0	1/1:1,3:4:12.04:277,12,0	0/0:22,0:17:33.63:0,34,752	0/0:16,0:15:12.04:0,12,228	0/0:99,0:97:99:0,105,2123	0/0:17,0:15:32.98:0,33,615	0/0:11,0:11:12.04:0,12,228	0/0:47,0:45:51.08:0,51,910	1/1:11,5:16:5.59:162,6,0	0/0:29,0:29:61.12:0,61,1475	0/0:17,0:17:45.09:0,45,791	0/0:17,0:17:45.15:0,45,804
chr10	95721865	.	TC	T	6617.47	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=18.796;DP=678;FS=11.598;HRun=5;HaplotypeScore=100.2960;InbreedingCoeff=0.9998;MQ=87.36;MQ0=0;MQRankSum=-5.858;QD=28.65;ReadPosRankSum=5.544;VQSLOD=3.9010;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,32:39:84.24:953,84,0	1/1:0,14:14:36.10:407,36,0	0/0:20,0:20:54.01:0,54,690	0/0:27,1:28:55.99:0,56,724	1/1:1,18:19:51.10:563,51,0	0/0:29,0:29:81.26:0,81,1091	0/0:28,0:28:81.25:0,81,1089	0/0:12,0:12:36.12:0,36,493	1/1:0,36:36:96.27:1088,96,0	0/0:21,0:21:63.20:0,63,843	0/0:17,0:17:48.13:0,48,610	0/0:29,0:29:84.28:0,84,1142	0/0:21,0:21:63.19:0,63,842	0/0:17,0:17:31.27:0,31,603	1/1:1,23:24:63.18:715,63,0	1/1:3,14:17:36.10:408,36,0	1/1:3,29:32:81.23:919,81,0	1/1:1,29:30:81.23:919,81,0	0/0:22,0:22:57.14:0,57,718	0/0:15,0:15:39.13:0,39,533	0/0:63,0:63:99:0,174,2271	0/0:14,0:14:42.11:0,42,535	0/0:14,0:14:39.13:0,39,531	0/0:32,0:32:96.28:0,96,1264	1/1:1,19:20:57.16:646,57,0	0/0:13,0:13:39.13:0,39,532	0/0:22,0:22:66.20:0,66,870	0/0:30,0:30:90.23:0,90,1161
chr10	95722196	.	C	CATTA	7807.36	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=1.059;DP=630;FS=0.824;HRun=0;HaplotypeScore=100.5175;InbreedingCoeff=0.9382;MQ=70.58;MQ0=0;MQRankSum=-2.646;QD=35.81;ReadPosRankSum=0.795;VQSLOD=5.0630;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,35:41:72.25:1797,72,0	1/1:3,8:13:24.03:493,24,0	0/0:9,0:7:2.97:0,3,17	0/0:13,0:13:1.43:0,1,77	1/1:4,15:19:44.91:881,45,0	0/0:22,0:22:51.11:0,51,752	0/0:21,0:21:51.16:0,51,839	0/0:23,0:23:42.07:0,42,561	1/1:5,16:21:35.99:785,36,0	0/0:29,0:29:75.22:0,75,1156	0/0:24,0:24:54.16:0,54,860	0/0:21,0:21:54.13:0,54,808	0/0:17,0:17:42.01:0,42,673	0/0:22,0:22:57.14:0,57,863	1/1:8,17:26:26.75:560,27,0	1/1:2,11:13:21:467,21,0	1/1:5,26:33:51.18:1273,51,0	1/1:12,18:31:42.14:1028,42,0	0/0:23,0:23:48.10:0,48,646	0/0:19,0:19:42.12:0,42,657	0/0:28,0:28:72.22:0,72,1165	0/0:15,0:15:39.07:0,39,552	0/0:19,0:19:44.22:0,44,696	0/0:23,0:23:60.19:0,60,978	1/1:5,14:20:21.07:524,21,0	0/0:40,0:40:99:0,108,1740	0/0:29,0:28:81.23:0,81,1280	0/0:14,0:14:42.07:0,42,628
chr10	95722783	.	GGT	G	874.44	PASS	AB=0.880;AC=26;AF=0.464;AN=56;BaseQRankSum=11.007;DP=589;FS=0.517;HRun=0;HaplotypeScore=108.9945;InbreedingCoeff=0.2786;MQ=61.79;MQ0=6;MQRankSum=-6.068;QD=2.45;ReadPosRankSum=2.699;VQSLOD=1.7330;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:6.57:30,7,0	1/1:7,0:7:8.48:41,8,0	0/0:24,0:13:3:0,3,26	0/0:16,0:11:2.97:0,3,20	1/1:11,0:11:5.68:28,6,0	0/1:17,3:20:12.12:12,0,232	0/1:26,9:35:86.59:87,0,606	0/0:23,0:26:15.67:0,16,284	1/1:17,0:17:28.41:139,28,0	0/1:20,2:22:43.64:44,0,178	0/0:6,0:6:12.04:0,12,180	0/1:34,5:39:22.69:23,0,950	0/1:18,3:21:74.72:75,0,239	0/0:12,0:12:3.71:0,4,150	1/1:22,0:21:41.02:198,41,0	1/1:12,0:12:17.04:84,17,0	1/1:17,0:16:2.84:14,3,0	1/1:17,0:17:19.89:98,20,0	0/0:22,0:20:16.26:0,16,170	0/1:14,1:15:15.57:16,0,210	0/0:49,3:51:26.91:0,27,667	0/0:19,0:19:21.07:0,21,311	0/0:10,0:10:12.02:0,12,153	0/1:33,9:42:99:118,0,881	1/1:11,0:11:8.52:42,9,0	0/1:25,2:27:17.44:17,0,121	0/0:21,2:25:20.45:0,20,652	0/0:19,0:20:33.47:0,33,433
chr10	95722784	.	GT	G	403.43	PASS	AB=0.663;AC=10;AF=0.179;AN=56;BaseQRankSum=11.605;DP=594;FS=4.111;HRun=1;HaplotypeScore=102.3996;InbreedingCoeff=0.2262;MQ=60.79;MQ0=7;MQRankSum=-10.639;QD=3.42;ReadPosRankSum=1.788;VQSLOD=0.4808;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,8:21:44.26:44,0,51	0/1:4,3:7:8.10:41,0,8	0/0:24,0:12:36.10:0,36,411	0/0:17,0:11:14.35:0,14,258	0/1:5,6:11:10.60:33,0,11	0/0:20,0:20:49.90:0,50,618	0/0:35,0:35:74.31:0,74,984	0/0:26,0:26:77.04:0,77,968	1/1:5,12:17:12.49:141,12,0	0/0:22,0:22:52.93:0,53,675	0/0:6,0:6:18.06:0,18,263	0/0:37,0:37:95.97:0,96,1382	0/0:21,0:21:43.47:0,43,576	0/0:12,0:12:28.53:0,29,349	0/1:5,17:21:26.07:128,0,26	0/1:5,7:12:39.63:40,0,57	0/0:14,3:16:11.58:0,12,134	0/1:10,7:17:73.71:78,0,74	0/0:22,0:20:52.35:0,52,630	0/0:16,0:16:33.99:0,34,456	0/0:54,0:53:99:0,120,1527	0/0:21,0:21:53.18:0,53,689	0/0:9,0:9:23.82:0,24,329	0/0:43,0:42:99:0,102,1336	1/1:5,6:11:2.49:46,2,0	0/0:29,0:29:75.58:0,76,870	0/0:25,0:25:70.09:0,70,958	0/0:20,0:20:54.55:0,55,727
chr10	95722786	.	GTGTGTGTGT	G	2975.69	PASS	AB=0.676;AC=10;AF=0.179;AN=56;BaseQRankSum=12.235;DP=597;FS=10.989;HRun=0;HaplotypeScore=175.6358;InbreedingCoeff=0.1154;MQ=58.99;MQ0=7;MQRankSum=-11.212;QD=22.72;ReadPosRankSum=4.003;VQSLOD=1.9716;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,7:20:53.46:151,0,53	0/1:3,2:6:17.06:178,0,17	0/0:26,0:13:39.08:0,39,615	0/0:15,0:9:9.05:0,9,391	0/1:4,5:10:27.30:122,0,27	0/0:21,0:21:48.70:0,49,1746	0/0:35,0:35:81.75:0,82,3041	0/0:26,0:26:78.26:0,78,2330	1/1:4,11:16:20.28:696,20,0	0/0:24,0:24:72.24:0,72,2405	0/0:8,0:8:21.07:0,21,847	0/0:38,0:38:99:0,105,4298	0/0:20,0:20:49.77:0,50,1784	0/0:13,0:13:29.44:0,29,944	0/1:6,15:22:99:909,0,183	0/1:5,7:12:42.61:407,0,43	0/1:13,2:15:42.94:43,0,150	0/1:10,6:17:99:436,0,102	0/0:22,0:20:60.18:0,60,1548	0/0:15,0:15:36.12:0,36,1212	0/0:58,0:57:99:0,133,4236	0/0:21,0:21:56.14:0,56,1791	0/0:9,0:9:23.82:0,24,807	0/0:42,0:41:99:0,111,4388	0/1:5,4:11:0.11:185,0,0	0/0:28,0:28:80.75:0,81,2086	0/0:25,0:25:72.24:0,72,2921	0/0:20,0:20:55.74:0,56,1948
chr10	95724663	.	T	TAA	3165.88	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.345;DP=627;FS=2.458;HRun=0;HaplotypeScore=96.6924;InbreedingCoeff=0.9975;MQ=78.30;MQ0=0;MQRankSum=-0.979;QD=15.44;ReadPosRankSum=3.468;VQSLOD=3.7852;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,40:46:99:1516,107,0	1/1:2,0:10:16.58:100,17,0	0/0:28,0:21:50.73:0,51,565	0/0:31,0:23:40.14:0,40,514	1/1:4,0:27:34.40:286,34,0	0/0:21,0:21:63.21:0,63,1002	0/0:25,0:25:72.25:0,72,1171	0/0:21,0:21:59.74:0,60,925	1/1:2,0:21:24.19:211,24,0	0/0:27,0:27:81.27:0,81,1276	0/0:17,0:17:51.17:0,51,819	0/0:21,0:21:63.22:0,63,1024	0/0:25,0:25:75.19:0,75,1110	0/0:17,0:17:48.15:0,48,750	1/1:1,0:14:28.10:176,28,0	1/1:2,0:20:42.04:248,42,0	1/1:5,0:31:72.94:425,73,0	1/1:2,0:21:49.27:273,49,0	0/0:23,0:23:57.18:0,57,899	0/0:20,0:20:60.20:0,60,968	0/0:16,0:16:48.16:0,48,769	0/0:13,0:13:39.12:0,39,608	0/0:16,0:16:48.16:0,48,760	0/0:28,0:28:84.29:0,84,1361	1/1:1,0:14:25.22:146,25,0	0/0:28,0:28:81.26:0,81,1281	0/0:30,0:30:90.31:0,90,1450	0/0:14,0:15:45.15:0,45,709
chr10	95724818	.	CAG	C	12358	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=12.875;DP=632;FS=1.340;HRun=0;HaplotypeScore=79.6000;InbreedingCoeff=0.9996;MQ=88.01;MQ0=2;MQRankSum=-3.571;QD=38.14;ReadPosRankSum=1.772;VQSLOD=6.8719;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,135,2493	0/0:8,0:8:24.06:0,24,415	0/0:24,0:24:69.24:0,69,1233	0/0:23,0:23:62.93:0,63,1118	0/0:16,0:16:39.13:0,39,730	1/1:1,20:21:54.18:795,54,0	1/1:1,29:30:69.23:1016,69,0	0/0:28,0:28:81.27:0,81,1477	0/0:26,0:26:72.21:0,72,1254	1/1:0,20:20:60.20:882,60,0	1/1:1,16:17:42.14:618,42,0	1/1:1,24:25:72.24:1060,72,0	1/1:0,16:16:39.13:573,39,0	1/1:0,22:22:54.18:795,54,0	0/0:14,0:14:39.12:0,39,699	0/0:18,0:18:51.17:0,51,955	0/0:36,0:36:99:0,102,1909	0/0:25,0:25:72.20:0,72,1285	1/1:1,16:17:48.16:707,48,0	1/1:0,19:18:54.14:771,54,0	1/1:2,40:41:99:1546,105,0	1/1:0,16:16:39.13:574,39,0	1/1:0,13:13:30.10:440,30,0	1/1:0,19:19:45.15:662,45,0	0/0:19,0:19:48.16:0,48,899	1/1:0,27:27:78.25:1125,78,0	1/1:1,19:20:54.18:794,54,0	0/0:23,0:23:63.22:0,63,1179
chr10	95725949	.	A	AACCTCAGAG	18001.76	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=8.863;DP=576;FS=6.461;HRun=0;HaplotypeScore=164.8337;InbreedingCoeff=0.9995;MQ=96.17;MQ0=0;MQRankSum=-16.616;QD=105.27;ReadPosRankSum=0.493;VQSLOD=5.4462;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,25:38:78.14:3558,78,0	1/1:1,11:12:36.12:1772,36,0	0/0:34,0:34:46.23:0,46,2555	0/0:29,0:29:87.30:0,87,2609	1/1:4,14:19:36.04:1638,36,0	0/0:17,0:17:51.18:0,51,1567	0/0:25,0:25:72.23:0,72,2199	0/0:28,0:28:72.24:0,72,2129	1/1:3,12:15:45.04:1967,45,0	0/0:24,0:24:72.25:0,72,2146	0/0:18,0:18:54.16:0,54,1478	0/0:27,0:27:75.26:0,75,2238	0/0:15,0:15:45.14:0,45,1347	0/0:15,0:15:42.14:0,42,1295	1/1:7,7:15:33.11:1538,33,0	1/1:7,12:21:54.19:2509,54,0	1/1:9,10:23:45.15:2003,45,0	1/1:7,4:11:24.08:1101,24,0	0/0:16,0:16:48.16:0,48,1418	0/0:13,0:13:39.12:0,39,1094	0/0:18,0:18:54.19:0,54,1700	0/0:28,0:28:81.26:0,81,2435	0/0:22,0:22:60.21:0,60,1852	0/0:29,0:29:84.29:0,84,2603	1/1:3,12:16:39.13:1916,39,0	0/0:19,0:19:54.19:0,54,1632	0/0:17,0:17:48.16:0,48,1475	0/0:11,0:11:33.10:0,33,966
chr10	95726790	.	GGTGTGT	G	1811.53	PASS	AC=24;AF=0.500;AN=48;BaseQRankSum=1.711;DP=533;FS=10.693;HRun=0;HaplotypeScore=117.3119;InbreedingCoeff=0.7021;MQ=64.15;MQ0=6;MQRankSum=-5.692;QD=7.33;ReadPosRankSum=2.839;VQSLOD=1.4236;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:24:8.19:0,8,200	0/0:10,0:10:18.53:0,19,489	./.	./.	0/0:16,0:16:9.03:0,9,262	1/1:10,2:15:12.04:225,12,0	1/1:20,3:23:5.77:111,6,0	0/0:25,0:24:12.04:0,12,313	0/0:16,0:16:20.19:0,20,485	0/0:14,0:14:0:0,0,0	./.	1/1:30,2:32:3.01:61,3,0	1/1:13,4:18:11.83:190,12,0	1/1:10,6:16:18.06:346,18,0	0/0:16,0:20:12.02:0,12,247	0/0:12,0:17:4.57:0,5,82	1/1:16,0:24:12.04:168,12,0	1/1:13,0:17:6.02:84,6,0	1/1:16,0:16:3:28,3,0	./.	0/0:55,0:56:3.01:0,3,43	1/1:9,2:10:6.02:102,6,0	0/0:7,2:9:0:0,0,0	1/1:23,1:24:9.03:182,9,0	0/0:10,0:14:6.49:0,6,173	1/1:24,4:28:11.82:202,12,0	1/1:14,6:21:13.86:283,14,0	0/0:11,0:10:13.29:0,13,266
chr10	95727474	.	T	TCACACA	1091.21	PASS	AB=0.917;AC=24;AF=0.462;AN=52;BaseQRankSum=1.276;DP=415;FS=1.601;HRun=0;HaplotypeScore=139.6398;InbreedingCoeff=0.1498;MQ=44.84;MQ0=4;MQRankSum=-1.038;QD=4.38;ReadPosRankSum=-1.588;VQSLOD=2.5382;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:8.84:0,9,131	1/1:2,0:1:3.01:73,3,0	./.	./.	1/1:18,0:18:11.89:125,12,0	0/0:27,0:25:0.36:0,0,212	0/1:16,0:15:6.39:6,0,84	1/1:23,0:21:8.89:60,9,0	1/1:9,0:9:8.86:190,9,0	0/1:17,0:16:40.14:40,0,105	0/1:10,0:11:4.51:5,0,29	0/1:15,0:14:9.81:10,0,102	0/0:9,0:9:8.13:0,8,60	0/1:21,0:21:68.64:69,0,107	1/1:7,7:14:3.01:80,3,0	1/1:16,0:16:15.69:311,16,0	0/0:22,0:23:50.55:0,51,1148	0/0:15,0:15:27.06:0,27,505	0/1:13,0:13:21.60:22,0,49	0/1:11,0:10:27.03:87,0,27	0/0:19,0:17:18.97:0,19,131	0/0:5,0:4:3.46:0,3,24	0/0:10,0:10:8.45:0,8,64	0/1:10,0:23:14.16:14,0,17	0/1:5,6:13:0:1,0,0	0/1:18,0:17:34.38:34,0,200	0/0:14,0:14:14.86:0,15,142	1/1:9,0:9:14.87:129,15,0
chr10	95728953	.	G	GTTGT	8320.45	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-11.229;DP=684;FS=7.056;HRun=0;HaplotypeScore=108.6261;InbreedingCoeff=0.9486;MQ=62.24;MQ0=2;MQRankSum=-1.205;QD=36.65;ReadPosRankSum=1.997;VQSLOD=4.8189;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,1:32:39.56:631,40,0	1/1:5,10:15:21.07:503,21,0	0/0:24,0:16:9.02:0,9,121	0/0:33,0:28:26.99:0,27,378	1/1:7,15:24:54.06:1137,54,0	0/0:16,0:16:39.13:0,39,624	0/0:26,0:26:54.10:0,54,834	1/1:14,7:23:30.52:507,31,0	1/1:4,18:22:54.19:1295,54,0	0/0:25,0:24:33.07:0,33,477	0/0:21,0:20:42.13:0,42,651	0/0:21,0:22:36.11:0,36,535	0/0:23,0:23:51.17:0,51,816	0/0:25,0:25:57.18:0,57,889	1/1:9,17:26:0.13:1031,0,0	1/1:8,19:28:51.18:1212,51,0	0/0:30,0:30:57.17:0,57,866	0/0:25,0:25:51.17:0,51,816	0/0:23,0:23:30.10:0,30,456	0/0:11,0:12:36.12:0,36,556	0/0:25,0:25:48.16:0,48,766	0/0:17,0:18:27.08:0,27,412	0/0:21,0:22:40.37:0,40,594	0/0:38,0:38:87.25:0,87,1341	1/1:9,13:23:27.09:647,27,0	0/0:24,0:24:39.12:0,39,601	0/0:24,0:24:57.19:0,57,902	1/1:9,22:31:57.20:1356,57,0
chr10	95730298	.	A	AAAAT	2054.04	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=-5.035;DP=290;FS=7.975;HRun=0;HaplotypeScore=45.2974;InbreedingCoeff=0.4262;MQ=57.90;MQ0=1;MQRankSum=2.067;QD=27.76;ReadPosRankSum=-0.365;VQSLOD=1.9720;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:6.61:7,0,403	0/0:3,0:3:3.01:0,3,49	0/0:11,0:10:3.86:0,4,65	0/1:6,0:5:0:0,0,0	0/0:8,0:8:17.67:0,18,245	0/0:7,0:7:15.03:0,15,190	0/0:7,0:7:9.03:0,9,146	0/0:29,0:29:45.15:0,45,708	0/0:8,0:8:9.03:0,9,146	0/0:12,0:12:12.04:0,12,195	0/0:9,0:9:6.02:0,6,97	0/0:4,0:4:6.01:0,6,76	0/0:3,0:3:6.02:0,6,85	0/0:4,0:4:3.01:0,3,49	0/0:4,0:4:9.03:0,9,146	0/0:8,0:8:9.03:0,9,146	1/1:9,15:24:45.15:1090,45,0	1/1:7,16:24:45.15:1079,45,0	0/0:24,0:24:39.12:0,39,591	0/0:5,0:5:9:0,9,97	0/0:4,0:4:12.02:0,12,169	0/0:5,0:5:3.01:0,3,49	0/0:8,0:8:6.02:0,6,97	0/0:4,0:4:2.97:0,3,20	0/0:8,0:7:21.06:0,21,317	0/0:13,0:13:24.07:0,24,367	0/0:11,0:11:15.05:0,15,243	0/0:17,0:17:39.13:0,39,628
chr10	95730496	.	CTT	C	701.35	PASS	AC=24;AF=0.480;AN=50;BaseQRankSum=4.311;DP=254;FS=0.000;HRun=16;HaplotypeScore=61.7528;InbreedingCoeff=0.7137;MQ=77.91;MQ0=11;MQRankSum=-2.827;QD=8.45;ReadPosRankSum=2.755;VQSLOD=0.5740;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:53.26:0,53,591	./.	0/0:17,0:10:12.13:0,12,72	0/0:18,0:8:5.88:0,6,44	0/0:5,0:6:9.02:0,9,107	1/1:1,5:7:14.69:112,15,0	1/1:5,3:9:8.55:61,9,0	0/0:31,0:32:37.65:0,38,454	0/0:3,0:4:8.33:0,8,51	1/1:1,3:5:11.71:87,12,0	1/1:1,1:1:3:25,3,0	0/0:2,0:2:0:0,0,0	1/1:0,3:3:5.96:49,6,0	1/1:2,1:4:8.71:58,9,0	0/0:5,0:4:3.01:0,3,39	0/0:3,0:3:5.98:0,6,59	0/0:21,0:23:41.60:0,42,421	0/0:16,0:16:27.01:0,27,307	1/1:16,4:24:4.62:148,5,0	1/1:0,1:1:3:25,3,0	1/1:5,5:8:8.72:75,9,0	./.	./.	1/1:1,6:6:17.89:142,18,0	0/0:2,0:3:8.38:0,8,76	1/1:3,3:6:8.10:73,8,0	1/1:1,3:4:3:25,3,0	0/0:13,0:11:20.59:0,21,223
chr10	95733754	.	G	GGA	1121.47	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.459;DP=658;FS=0.000;HRun=0;HaplotypeScore=84.6334;InbreedingCoeff=0.9791;MQ=81.11;MQ0=0;MQRankSum=0.259;QD=36.18;ReadPosRankSum=-3.927;VQSLOD=4.3310;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,159,1990	0/0:10,0:10:27.09:0,27,340	0/0:25,0:25:50.77:0,51,573	0/0:28,0:26:34.51:0,35,597	0/0:19,0:19:57.18:0,57,719	0/0:25,0:25:66.21:0,66,833	0/0:22,0:22:60.19:0,60,757	1/1:5,21:26:63.22:1039,63,0	0/0:23,0:23:57.15:0,57,691	0/0:26,0:26:66.21:0,66,832	0/0:9,0:9:18.06:0,18,227	0/0:24,0:24:63.19:0,63,782	0/0:28,0:28:66.19:0,66,817	0/0:24,0:24:60.19:0,60,757	0/0:20,0:20:54.16:0,54,668	0/0:13,0:13:36.10:0,36,442	0/0:36,0:36:93.30:0,93,1173	0/0:19,0:19:54.17:0,54,679	0/0:19,0:19:54.14:0,54,644	0/0:21,0:21:54.16:0,54,669	0/0:41,0:42:99:0,108,1325	0/0:24,0:24:60.16:0,60,729	0/0:24,0:24:51.16:0,51,643	0/0:21,0:21:54.17:0,54,681	0/0:16,0:16:42.12:0,42,518	0/0:24,0:24:51.16:0,51,644	0/0:25,0:25:69.20:0,69,844	1/1:1,4:5:12.04:199,12,0
chr10	95734262	.	A	AAC	24554.32	PASS	AB=0.629;AC=40;AF=0.714;AN=56;BaseQRankSum=-10.661;DP=1058;FS=15.239;HRun=0;HaplotypeScore=135.1309;InbreedingCoeff=0.7492;MQ=59.14;MQ0=16;MQRankSum=2.754;QD=30.58;ReadPosRankSum=0.133;VQSLOD=5.9552;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:54:99:0,138,1608	1/1:4,15:19:6.37:577,6,0	0/0:41,0:18:17.26:0,17,182	0/0:41,0:21:26.48:0,26,268	1/1:6,25:30:37.24:1023,37,0	1/1:5,22:27:24.82:741,25,0	1/1:24,0:32:30.21:219,30,0	0/0:27,0:28:53.99:0,54,618	1/1:17,26:42:63.29:1379,63,0	0/1:26,29:51:12.58:1588,0,13	1/1:7,14:21:39.03:569,39,0	1/1:18,34:51:99:1938,126,0	1/1:9,25:36:0.29:963,0,0	1/1:8,28:36:3.31:1018,3,0	1/1:13,31:44:24.52:1102,25,0	1/1:6,24:30:57.19:910,57,0	0/0:41,0:43:99:0,105,1211	0/0:31,0:31:37.25:0,37,763	1/1:5,13:18:42.13:646,42,0	1/1:6,21:27:30.26:948,30,0	1/1:28,60:85:99:3206,178,0	1/1:7,33:40:93.03:1425,93,0	1/1:2,25:27:60.20:959,60,0	1/1:17,42:58:83.81:2277,84,0	1/1:9,17:27:36.12:576,36,0	1/1:12,41:52:87.46:1821,87,0	0/1:12,23:33:20.76:668,0,21	0/0:15,0:15:27.04:0,27,287
chr10	95734459	.	G	GCA	39289.07	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-10.856;DP=1240;FS=0.881;HRun=0;HaplotypeScore=161.2480;InbreedingCoeff=0.9964;MQ=52.97;MQ0=16;MQRankSum=3.206;QD=35.98;ReadPosRankSum=1.473;VQSLOD=6.2623;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,46:60:99:2184,129,0	1/1:3,7:9:21.07:342,21,0	0/0:30,0:11:23.91:0,24,296	0/0:33,0:9:20.80:0,21,243	1/1:5,24:27:51.17:875,51,0	1/1:0,23:21:51.17:874,51,0	1/1:4,26:26:51.17:874,51,0	1/1:10,31:29:41.47:971,41,0	1/1:5,63:67:99:2878,169,0	1/1:10,66:72:99:3064,187,0	1/1:2,20:22:36.12:616,36,0	1/1:8,59:66:99:2261,132,0	1/1:8,47:59:99:1889,111,0	1/1:5,57:62:99:2619,154,0	1/1:3,64:67:99:2776,163,0	1/1:6,42:48:99:1954,114,0	0/0:41,0:40:78.31:0,78,1060	0/0:43,0:43:83.53:0,84,1456	1/1:9,9:13:27.09:463,27,0	1/1:3,27:30:66.23:1131,66,0	1/1:36,101:131:99:4932,292,0	1/1:5,33:39:72.25:1235,72,0	1/1:2,20:20:39.13:668,39,0	1/1:7,46:52:99:1697,99,0	1/1:3,23:26:66.22:1113,66,0	1/1:6,47:50:99:2235,132,0	1/1:4,28:31:69.23:1175,69,0	1/1:1,12:13:27.09:463,27,0
chr10	95734464	.	C	CAT	19456.51	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=13.722;DP=1242;FS=4.418;HRun=0;HaplotypeScore=230.0387;InbreedingCoeff=0.3604;MQ=54.01;MQ0=13;MQRankSum=0.747;QD=17.82;ReadPosRankSum=13.570;VQSLOD=2.5775;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:61,0:59:13.88:1031,14,0	1/1:8,1:8:21.02:221,21,0	0/0:33,0:13:32.46:0,32,398	0/0:35,0:14:30.16:0,30,319	0/1:28,0:26:33.81:400,0,34	1/1:23,0:21:51.01:457,51,0	0/1:32,0:27:11.88:402,0,12	0/1:46,0:34:99:414,0,212	1/1:70,0:69:99:1527,103,0	1/1:77,1:73:32.39:1424,32,0	0/1:22,0:22:7.88:303,0,8	1/1:68,0:67:0.52:1104,1,0	1/1:56,0:55:25.18:972,25,0	1/1:60,0:60:99:1472,131,0	1/1:69,0:69:76.27:1414,76,0	1/1:47,0:47:5.16:939,5,0	0/0:37,2:38:90.97:0,91,1315	0/0:41,1:42:62.67:0,63,1709	0/1:13,0:10:21.88:187,0,22	1/1:30,0:30:45.09:607,45,0	0/1:142,0:136:33.58:2311,0,34	1/1:39,0:39:30.10:614,30,0	1/1:22,0:20:18.05:333,18,0	1/1:52,2:53:1.21:795,1,0	1/1:25,1:26:65.95:611,66,0	1/1:50,1:47:67.96:1094,68,0	1/1:33,0:32:14.08:574,14,0	1/1:12,0:12:27.02:252,27,0
chr10	95734931	.	A	ACACACG	3759.95	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-2.676;DP=1061;FS=2.951;HRun=0;HaplotypeScore=212.5891;InbreedingCoeff=0.9707;MQ=54.58;MQ0=12;MQRankSum=-9.311;QD=21.24;ReadPosRankSum=-4.018;VQSLOD=2.7198;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:98.74:0,99,1957	1/1:5,10:17:11.97:399,12,0	0/0:50,0:23:20.13:0,20,307	0/0:55,0:26:25.61:0,26,336	1/1:4,17:24:9.03:211,9,0	0/0:22,0:22:48.14:0,48,950	0/0:45,0:45:93.32:0,93,1888	0/0:30,0:30:54.17:0,54,1029	1/1:13,35:48:30.10:999,30,0	0/0:64,0:64:99:0,150,3014	0/0:23,0:23:44.69:0,45,933	0/0:58,0:58:99:0,120,2407	0/0:32,0:32:75.14:0,75,1387	0/0:42,0:42:96.30:0,96,1961	1/1:5,25:28:36.12:1156,36,0	1/1:11,13:24:12.04:400,12,0	0/0:39,0:39:99:0,111,2361	0/0:32,0:32:68.97:0,69,1557	0/0:23,0:17:27.04:0,27,421	0/0:33,0:33:63.22:0,63,1304	0/0:115,0:114:99:0,227,4404	0/0:23,0:23:48.14:0,48,933	0/0:12,0:12:30.06:0,30,548	0/0:49,0:47:90.20:0,90,1715	1/1:3,26:31:15.80:595,16,0	0/0:50,0:49:99:0,102,2117	0/0:18,0:18:39.07:0,39,738	0/0:20,0:20:57.19:0,57,1159
chr10	95737653	.	G	GA	1377.90	PASS	AC=24;AF=0.462;AN=52;BaseQRankSum=3.817;DP=354;FS=7.529;HRun=7;HaplotypeScore=101.5076;InbreedingCoeff=0.8876;MQ=37.88;MQ0=19;MQRankSum=-3.948;QD=9.91;ReadPosRankSum=-2.069;VQSLOD=1.3194;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:23.97:0,24,232	0/0:4,0:4:9.01:0,9,87	./.	./.	0/0:11,0:10:15.02:0,15,145	1/1:14,7:19:18.04:199,18,0	1/1:9,4:13:11.99:128,12,0	1/1:5,9:13:27.05:310,27,0	0/0:7,0:6:15.02:0,15,145	1/1:6,4:10:12:145,12,0	1/1:12,3:12:14.90:136,15,0	1/1:8,1:9:4.83:42,5,0	1/1:3,6:9:12.04:144,12,0	1/1:4,2:6:1.55:4,2,0	0/0:8,0:8:11.99:0,12,112	0/0:14,0:13:24.04:0,24,231	0/0:27,0:27:23.02:0,23,230	0/0:25,0:24:37.63:0,38,368	0/0:22,0:19:32.08:0,32,295	0/0:14,0:14:30.04:0,30,289	0/0:18,0:14:18.01:0,18,168	1/1:4,3:6:6.02:66,6,0	1/1:5,7:11:12.04:144,12,0	1/1:10,4:13:11.36:94,11,0	0/0:10,0:10:24.03:0,24,226	0/0:13,0:13:21.03:0,21,202	0/0:19,0:19:42.06:0,42,405	1/1:7,2:5:15.04:169,15,0
chr10	95737734	.	TG	T	3221.92	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=2.515;DP=435;FS=4.784;HRun=3;HaplotypeScore=134.4477;InbreedingCoeff=0.9873;MQ=72.10;MQ0=3;MQRankSum=-6.056;QD=20.26;ReadPosRankSum=-0.620;VQSLOD=2.9138;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:26.54:95,27,0	0/0:9,0:9:26.07:0,26,154	0/0:31,0:20:23.09:0,23,346	0/0:28,0:20:31.38:0,31,416	0/0:20,0:20:54.74:0,55,320	1/1:3,6:9:23.91:197,24,0	1/1:3,3:6:11.99:102,12,0	1/1:8,0:8:17.96:145,18,0	0/0:17,1:18:29.24:0,29,228	1/1:6,21:27:80.95:747,81,0	1/1:4,15:19:53.84:468,54,0	1/1:1,9:10:29.99:272,30,0	1/1:5,4:9:14.88:121,15,0	1/1:2,5:7:20.96:184,21,0	0/0:12,0:11:20.71:0,21,123	0/0:13,0:13:32.48:0,32,194	0/0:14,0:14:33:0,33,403	0/0:18,0:18:48.16:0,48,687	0/0:10,0:10:28.70:0,29,173	0/0:15,0:15:41.99:0,42,222	0/0:14,0:14:32.62:0,33,179	1/1:4,7:11:26.98:243,27,0	1/1:2,17:19:53.98:479,54,0	1/1:0,5:5:14.99:132,15,0	0/0:25,0:25:65.29:0,65,388	0/0:28,0:28:68.96:0,69,394	0/0:21,0:21:58.50:0,58,359	1/1:1,9:10:29.97:267,30,0
chr10	95737736	.	GGT	G	4117.86	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=1.327;DP=432;FS=8.722;HRun=0;HaplotypeScore=138.5237;InbreedingCoeff=0.7742;MQ=73.19;MQ0=3;MQRankSum=-8.359;QD=22.14;ReadPosRankSum=-1.751;VQSLOD=3.7057;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:37.28:0,37,238	0/0:9,0:9:11.91:0,12,87	0/0:31,0:21:43.93:0,44,576	0/0:28,0:20:45.67:0,46,550	0/0:20,0:20:22.11:0,22,167	1/1:8,1:9:23.94:226,24,0	1/1:5,1:6:12.02:133,12,0	1/1:7,0:7:20.23:218,20,0	0/1:18,0:18:26.96:27,0,109	1/1:26,1:27:81.08:868,81,0	1/1:18,1:19:53.93:544,54,0	1/1:9,1:10:30.08:343,30,0	1/1:4,2:6:14.93:152,15,0	1/1:7,0:7:20.98:213,21,0	0/0:13,0:12:14.23:0,14,69	0/0:13,0:13:15.68:0,16,86	0/0:12,0:12:33.03:0,33,587	0/0:16,0:16:48.16:0,48,966	0/0:10,0:10:14.35:0,14,129	0/1:15,0:15:13.32:13,0,41	0/1:13,0:13:4.85:5,0,47	1/1:9,2:11:28.28:303,28,0	1/1:20,0:20:54.11:586,54,0	1/1:5,0:5:15.04:161,15,0	0/0:25,0:25:15.70:0,16,124	0/0:27,0:27:9:0,9,106	0/0:21,0:21:36:0,36,137	1/1:13,0:13:32.07:325,32,0
chr10	95737737	.	GT	G	1972.85	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=6.526;DP=434;FS=13.625;HRun=10;HaplotypeScore=139.3938;InbreedingCoeff=0.8251;MQ=72.92;MQ0=3;MQRankSum=-3.491;QD=5.69;ReadPosRankSum=0.640;VQSLOD=0.4148;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:47.99:416,48,0	1/1:9,0:9:14.25:41,14,0	0/0:30,0:21:0.98:0,1,120	0/0:27,0:19:21.48:0,21,151	1/1:20,0:21:35.26:106,35,0	1/1:9,0:9:10.18:30,10,0	1/1:6,0:6:6.81:24,7,0	1/1:9,0:9:9.73:35,10,0	1/1:18,0:18:34.59:119,35,0	1/1:27,0:27:41.77:122,42,0	1/1:19,0:19:26.46:78,26,0	1/1:10,0:10:19.89:58,20,0	1/1:6,0:6:8.33:24,8,0	1/1:7,0:7:10.18:30,10,0	1/1:13,0:12:21.99:84,22,0	1/1:13,0:13:25.36:84,25,0	0/0:11,0:12:29.78:0,30,294	0/0:16,0:16:48.13:0,48,531	1/1:10,0:10:13.07:44,13,0	1/1:15,0:15:26.48:76,26,0	1/1:12,0:12:25.33:81,25,0	1/1:11,0:11:17.87:52,18,0	1/1:20,0:20:35.14:108,35,0	1/1:5,0:5:10.19:30,10,0	1/1:25,0:25:47.53:147,48,0	1/1:27,0:27:52.87:169,53,0	1/1:21,0:21:36.66:106,37,0	1/1:14,0:14:21.92:64,22,0
chr10	95737746	.	TTC	T	10437.34	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=6.195;DP=427;FS=12.340;HRun=0;HaplotypeScore=114.5237;InbreedingCoeff=0.9443;MQ=69.95;MQ0=2;MQRankSum=-2.707;QD=32.82;ReadPosRankSum=1.242;VQSLOD=6.6536;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:48.78:0,49,271	1/1:0,7:7:21.07:299,21,0	0/0:28,0:19:30.10:0,30,395	0/0:25,0:17:4.70:0,5,239	1/1:3,18:21:54.17:684,54,0	1/1:2,6:8:18.03:189,18,0	1/1:2,3:5:11.71:90,12,0	1/1:0,6:6:17.93:154,18,0	1/1:1,15:16:48.04:633,48,0	1/1:4,21:25:72.17:807,72,0	1/1:1,15:16:39.08:439,39,0	1/1:1,9:10:28.63:308,29,0	1/1:2,4:6:12.01:125,12,0	1/1:2,5:7:18.04:197,18,0	1/1:0,11:11:29.94:356,30,0	1/1:1,13:14:34.36:473,34,0	0/0:15,0:15:38.96:0,39,572	0/0:18,0:18:54.15:0,54,941	1/1:4,5:9:24.04:304,24,0	1/1:0,17:17:45.04:590,45,0	1/1:0,15:15:36.04:486,36,0	1/1:2,8:10:27.07:306,27,0	1/1:0,20:20:53.60:550,54,0	1/1:1,5:6:18.03:187,18,0	1/1:0,26:26:72.14:978,72,0	1/1:0,28:28:81.24:1107,81,0	1/1:0,20:20:54.18:770,54,0	1/1:5,9:14:36.08:406,36,0
chr10	95737747	.	TC	T	5453.57	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=6.362;DP=428;FS=16.492;HRun=3;HaplotypeScore=125.3282;InbreedingCoeff=0.9198;MQ=70.99;MQ0=2;MQRankSum=-3.921;QD=16.04;ReadPosRankSum=2.136;VQSLOD=3.6827;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:3.64:67,4,0	1/1:7,0:7:20.45:117,20,0	0/0:28,0:20:20.32:0,20,227	0/0:26,0:17:23.11:0,23,179	1/1:19,2:21:55.66:360,56,0	1/1:8,0:8:17.91:135,18,0	1/1:5,0:5:8.86:58,9,0	1/1:6,0:6:17.91:136,18,0	1/1:15,1:16:40.85:234,41,0	1/1:25,0:25:71.70:573,72,0	1/1:16,0:16:38.76:297,39,0	1/1:10,0:10:26.84:205,27,0	1/1:6,0:6:11.76:84,12,0	1/1:7,0:7:17.93:142,18,0	1/1:12,0:11:23.24:130,23,0	1/1:13,1:14:35.16:220,35,0	0/0:16,0:16:39.04:0,39,440	0/0:18,0:18:54.15:0,54,689	1/1:9,0:9:23.50:148,24,0	1/1:17,0:17:43.75:252,44,0	1/1:15,0:15:32.05:182,32,0	1/1:10,0:10:26.81:199,27,0	1/1:20,0:20:50.38:364,50,0	1/1:6,0:6:17.88:133,18,0	1/1:26,0:26:67.15:386,67,0	1/1:28,0:28:78.68:463,79,0	1/1:20,0:20:52.60:301,53,0	1/1:11,3:14:35.77:266,36,0
chr10	95737838	.	GT	G	701.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.592;DP=561;FS=2.334;HRun=1;HaplotypeScore=88.3468;InbreedingCoeff=0.9798;MQ=56.63;MQ0=11;MQRankSum=3.795;QD=26.97;ReadPosRankSum=0.880;VQSLOD=3.5792;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:25:57.12:796,57,0	0/0:9,0:9:27.09:0,27,432	0/0:18,0:6:15.52:0,16,224	0/0:24,0:12:29.97:0,30,474	0/0:34,0:34:96.33:0,96,1535	0/0:15,0:15:39.13:0,39,623	0/0:19,0:18:51.14:0,51,768	0/0:21,0:20:60.20:0,60,937	0/0:17,0:17:51.17:0,51,815	0/0:27,0:27:72.24:0,72,1129	0/0:13,0:13:36.12:0,36,568	0/0:13,0:13:39.12:0,39,600	0/0:16,0:16:48.16:0,48,766	0/0:12,0:12:36.11:0,36,552	0/0:19,0:19:57.19:0,57,904	0/0:14,0:14:39.13:0,39,623	0/0:37,0:37:99:0,108,1666	0/0:38,0:38:99:0,111,1747	0/0:20,0:17:48.16:0,48,760	0/0:17,0:17:45.15:0,45,707	0/0:20,0:19:42.13:0,42,647	0/0:14,0:14:42.14:0,42,671	0/0:14,0:14:39.13:0,39,623	0/0:29,0:29:81.28:0,81,1280	0/0:13,0:13:33.11:0,33,528	0/0:25,0:25:75.24:0,75,1175	0/0:27,0:27:78.27:0,78,1246	0/0:10,0:9:21.07:0,21,336
chr10	95739303	.	AGT	A	5543.76	PASS	AB=0.820;AC=27;AF=0.482;AN=56;BaseQRankSum=-7.887;DP=812;FS=2.701;HRun=0;HaplotypeScore=149.1447;InbreedingCoeff=0.7491;MQ=58.28;MQ0=20;MQRankSum=1.716;QD=14.98;ReadPosRankSum=2.489;VQSLOD=4.6947;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:33:5.21:0,5,30	1/1:6,3:10:17.62:172,18,0	0/0:42,0:7:5.93:0,6,62	0/0:50,0:16:14.97:0,15,148	1/1:8,11:20:27.06:298,27,0	0/0:15,0:22:35.02:0,35,306	0/0:33,0:49:74.02:0,74,665	0/1:12,7:21:16.82:228,0,17	1/1:7,20:29:56.83:611,57,0	0/0:15,1:42:48.26:0,48,677	0/0:5,0:14:15.86:0,16,115	0/0:13,0:33:40.41:0,40,320	0/0:17,0:33:65.58:0,66,639	0/0:11,0:30:54:0,54,510	1/1:11,11:25:53.79:554,54,0	1/1:13,15:29:53.95:578,54,0	0/1:21,2:23:23.19:23,0,493	0/1:21,5:26:77.09:77,0,657	1/1:10,5:15:17.88:186,18,0	1/1:9,6:15:36.02:376,36,0	1/1:26,38:67:89.67:974,90,0	0/0:15,0:30:35.69:0,36,333	0/0:14,0:31:32.25:0,32,262	0/0:14,0:33:65.97:0,66,572	1/1:6,15:24:38.61:385,39,0	1/1:17,7:25:41.74:425,42,0	1/1:10,15:27:44.75:458,45,0	1/1:5,6:11:20.72:199,21,0
chr10	95739379	.	CTT	C	4515.61	PASS	AB=0.724;AC=26;AF=0.464;AN=56;BaseQRankSum=-3.352;DP=604;FS=5.640;HRun=12;HaplotypeScore=117.5378;InbreedingCoeff=0.7483;MQ=73.60;MQ0=0;MQRankSum=-0.036;QD=14.71;ReadPosRankSum=2.611;VQSLOD=3.6969;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:32:83.69:0,84,1146	1/1:2,10:12:11.99:122,12,0	0/0:20,0:21:33.91:0,34,371	0/1:21,0:20:33.31:33,0,124	1/1:6,14:21:23.64:296,24,0	0/1:2,1:13:3.23:3,0,56	0/0:7,1:33:33.90:0,34,253	0/0:8,0:26:48.91:0,49,216	1/1:8,13:22:32.77:388,33,0	0/1:13,2:25:24.83:25,0,72	0/0:7,0:12:18.82:0,19,86	0/0:9,0:25:51.56:0,52,221	0/0:3,1:21:10.93:0,11,152	0/0:11,0:19:31.65:0,32,178	1/1:2,25:27:72.11:732,72,0	1/1:3,16:20:35.83:418,36,0	0/0:31,0:32:92.80:0,93,1348	0/0:31,0:33:95.78:0,96,1333	1/1:11,15:25:38.99:393,39,0	1/1:3,17:23:47.29:503,47,0	1/1:9,12:22:32.75:388,33,0	0/1:9,1:17:1.87:2,0,77	0/0:7,0:12:18.54:0,19,80	0/0:2,0:23:40.43:0,40,157	1/1:8,6:14:14.98:153,15,0	1/1:4,26:31:71.86:785,72,0	1/1:5,8:13:27.04:275,27,0	0/0:0,0:8:19.96:0,20,70
chr10	95739486	.	GACAGACATGTGCCACTCAGAGTCAGAACC	G	3147.91	PASS	AB=0.943;AC=25;AF=0.446;AN=56;BaseQRankSum=-1.728;DP=679;FS=0.000;HRun=0;HaplotypeScore=491.0401;InbreedingCoeff=0.8395;MQ=73.36;MQ0=0;MQRankSum=0.127;QD=14.51;ReadPosRankSum=0.376;VQSLOD=0.4759;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:87.06:0,87,5869	0/0:9,0:9:27.07:0,27,1297	0/0:27,0:26:38.26:0,38,730	0/0:27,0:26:32.97:0,33,364	0/0:23,0:23:53.99:0,54,1262	1/1:15,0:15:26.59:203,27,0	1/1:13,0:13:23.92:211,24,0	1/1:18,0:18:28.13:258,28,0	0/0:43,0:43:99:0,102,3415	1/1:15,0:15:17.41:118,17,0	1/1:4,10:14:8.76:165,9,0	1/1:9,17:26:12.04:830,12,0	1/1:5,9:14:6.02:418,6,0	1/1:8,14:22:3.01:223,3,0	0/0:39,0:39:99:0,99,4001	0/0:27,0:27:60.13:0,60,2035	0/0:32,0:32:69.11:0,69,4652	0/0:33,0:33:72.13:0,72,4580	0/0:24,0:24:42.07:0,42,2186	0/0:26,0:26:63.12:0,63,2320	0/0:55,0:55:93.32:0,93,2584	1/1:3,18:21:23.39:246,23,0	1/1:1,9:10:8.83:275,9,0	1/1:15,0:15:23.12:180,23,0	0/0:31,0:30:75.67:0,76,2800	0/1:31,2:33:99:214,0,5082	0/0:31,0:31:69.08:0,69,2357	1/1:1,0:1:2.97:20,3,0
chr10	95739511	.	GAACC	G	223.51	PASS	AB=0.714;AC=7;AF=0.125;AN=56;BaseQRankSum=3.539;DP=648;FS=21.455;HRun=0;HaplotypeScore=209.1725;InbreedingCoeff=0.5774;MQ=66.37;MQ0=0;MQRankSum=-0.721;QD=4.06;ReadPosRankSum=-2.540;VQSLOD=0.9191;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,3389	0/0:9,0:10:30.10:0,30,829	0/0:36,0:32:87.30:0,87,2273	0/0:31,0:29:42.51:0,43,1691	0/0:22,0:22:58.40:0,58,1398	0/0:10,0:10:23.65:0,24,594	0/0:10,0:10:26.67:0,27,564	0/1:9,6:15:99:242,0,631	0/0:42,0:42:99:0,123,3225	0/0:9,0:9:24.07:0,24,488	0/0:10,0:10:8.77:0,9,70	1/1:17,0:17:9.78:48,10,0	1/1:9,0:9:3:27,3,0	1/1:14,0:14:3:28,3,0	0/0:41,0:41:99:0,123,3200	0/0:29,0:29:87.30:0,87,2324	0/0:28,0:28:84.29:0,84,2298	0/0:29,0:29:84.29:0,84,2328	0/0:32,0:32:87.30:0,87,2247	0/0:24,0:24:69.19:0,69,1742	0/0:52,0:52:99:0,106,2408	0/0:18,0:18:14.32:0,14,121	0/0:9,0:9:4.79:0,5,19	0/0:10,0:10:21.46:0,21,403	0/0:32,0:31:93.27:0,93,2316	0/0:38,0:38:82.95:0,83,2810	0/0:26,0:26:75.20:0,75,1818	0/0:2,0:2:0.95:0,1,81
chr10	95739515	.	C	CACAG	2700.67	PASS	AB=0.867;AC=20;AF=0.357;AN=56;BaseQRankSum=2.798;DP=680;FS=4.514;HRun=0;HaplotypeScore=220.4656;InbreedingCoeff=0.4408;MQ=63.88;MQ0=0;MQRankSum=-4.548;QD=13.99;ReadPosRankSum=-4.739;VQSLOD=2.5220;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,114,2047	0/0:11,0:11:30.09:0,30,500	0/0:34,0:30:84.28:0,84,1436	0/0:33,0:31:62.28:0,62,1070	0/0:24,0:24:58:0,58,933	0/1:7,3:10:99:137,0,198	0/1:10,3:15:99:290,0,103	0/1:13,0:13:57.85:339,0,58	0/0:42,0:42:99:0,111,1990	0/1:9,3:13:99:486,0,132	1/1:10,0:10:3.01:78,3,0	1/1:18,0:18:15.05:382,15,0	1/1:12,0:12:12.04:252,12,0	1/1:16,0:16:6.02:135,6,0	0/0:40,0:40:99:0,111,1971	0/0:29,0:29:75.25:0,75,1319	0/0:29,0:29:81.23:0,81,1376	0/0:31,0:31:81.23:0,81,1413	0/0:33,0:33:87.22:0,87,1432	0/0:24,0:24:63.20:0,63,1104	0/0:53,0:53:69.77:0,70,1533	1/1:20,0:20:11.99:252,12,0	1/1:10,0:10:11.97:251,12,0	0/1:10,1:11:99:198,0,169	0/0:34,0:33:93.11:0,93,1613	0/1:42,0:42:10.29:10,0,1806	0/0:26,0:26:63.20:0,63,1077	1/1:1,2:3:3.01:78,3,0
chr10	95740814	.	ATC	A	1752.41	PASS	AB=0.820;AC=12;AF=0.214;AN=56;BaseQRankSum=-0.947;DP=565;FS=84.135;HRun=0;HaplotypeScore=126.2222;InbreedingCoeff=-0.0570;MQ=71.55;MQ0=11;MQRankSum=0.548;QD=8.76;ReadPosRankSum=4.400;VQSLOD=-0.0054;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,6:31:27.86:303,0,28	0/0:12,0:12:28.41:0,28,151	0/0:47,0:33:6.44:0,6,515	0/0:37,0:21:4.71:0,5,140	0/0:23,0:23:7.28:0,7,71	0/1:17,4:20:7.10:217,0,7	0/1:18,4:22:68.86:181,0,69	0/0:25,0:24:50.95:0,51,549	0/0:11,0:11:24.83:0,25,104	0/1:15,1:17:94.81:95,0,99	0/1:17,3:20:52.02:190,0,52	0/1:13,5:18:32.83:212,0,33	0/1:12,2:16:49.79:153,0,50	0/1:9,3:12:37.36:137,0,37	0/0:14,0:14:18.37:0,18,138	0/0:15,0:15:12.84:0,13,81	0/0:27,0:27:60.61:0,61,876	0/0:14,0:14:39.02:0,39,469	0/0:34,0:34:40.80:0,41,295	0/0:23,0:22:26.63:0,27,140	0/0:19,0:17:28.29:0,28,105	0/1:14,3:18:30.47:179,0,30	0/1:6,4:10:2.80:135,0,3	1/1:14,1:14:4.40:101,4,0	0/0:9,0:9:6.77:0,7,24	0/0:21,0:21:19.76:0,20,186	0/0:25,0:25:25.89:0,26,178	0/0:9,0:9:26.75:0,27,285
chr10	95740817	.	TCCCC	T	6809.56	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-8.541;DP=558;FS=2.182;HRun=12;HaplotypeScore=130.8702;InbreedingCoeff=0.9873;MQ=73.52;MQ0=10;MQRankSum=-2.469;QD=33.54;ReadPosRankSum=5.311;VQSLOD=3.3235;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:29:66.54:0,67,400	1/1:2,8:10:24.07:363,24,0	0/0:46,0:33:65.28:0,65,995	0/0:32,0:21:8.40:0,8,200	1/1:2,19:22:52.41:774,52,0	0/0:6,0:20:53.70:0,54,352	0/0:9,0:21:41.95:0,42,285	0/0:20,0:20:33.06:0,33,643	1/1:0,13:13:30.10:454,30,0	0/0:6,0:16:31.12:0,31,244	0/0:10,0:22:42.17:0,42,255	0/0:9,0:20:43.72:0,44,261	0/0:8,0:16:35.16:0,35,215	0/0:6,0:12:26.26:0,26,158	1/1:3,9:12:27.07:408,27,0	1/1:1,14:15:39.12:590,39,0	0/0:28,0:29:81.28:0,81,1655	0/0:15,0:15:36.12:0,36,778	1/1:6,26:32:78.22:1177,78,0	1/1:1,24:24:57.12:838,57,0	1/1:2,17:17:36.10:545,36,0	0/0:8,0:16:27.25:0,27,178	0/0:6,0:10:20.51:0,21,122	0/0:2,0:15:29.24:0,29,171	1/1:0,9:9:18.06:272,18,0	1/1:5,16:21:33.97:709,34,0	1/1:7,18:25:45.11:681,45,0	0/0:9,0:9:24.08:0,24,495
chr10	95741567	.	G	GT	11162.57	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=12.455;DP=714;FS=1.256;HRun=4;HaplotypeScore=98.4896;InbreedingCoeff=1.0000;MQ=77.71;MQ0=0;MQRankSum=-1.503;QD=36.96;ReadPosRankSum=1.281;VQSLOD=4.2016;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.22:0,93,1031	0/0:12,0:12:36.05:0,36,384	0/0:40,0:38:79.01:0,79,940	0/0:29,0:26:50.74:0,51,511	0/0:31,0:31:84.24:0,84,952	1/1:0,17:17:51.17:697,51,0	1/1:0,15:15:42.14:575,42,0	1/1:4,29:33:84.24:1113,84,0	0/0:23,0:23:66.19:0,66,748	1/1:2,39:41:99:1576,117,0	1/1:3,27:30:81.27:1100,81,0	1/1:3,28:31:84.28:1149,84,0	1/1:1,29:30:84.28:1149,84,0	1/1:0,22:22:63.21:861,63,0	0/0:32,0:32:87.25:0,87,987	0/0:19,0:19:51.13:0,51,570	0/0:19,0:19:45.13:0,45,510	0/0:22,0:22:66.19:0,66,748	0/0:31,0:31:75.21:0,75,851	0/0:22,0:22:63.15:0,63,694	0/0:14,0:14:42.12:0,42,476	1/1:0,19:19:48.16:657,48,0	1/1:1,22:24:63.21:851,63,0	1/1:1,23:24:63.21:861,63,0	0/0:18,0:18:54.14:0,54,603	0/0:31,1:32:40.17:0,40,844	0/0:35,0:35:93.25:0,93,1044	1/1:0,16:16:42.14:574,42,0
chr10	95742023	.	A	AC	9186.42	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=0.130;DP=712;FS=6.735;HRun=7;HaplotypeScore=80.7459;InbreedingCoeff=0.9992;MQ=59.24;MQ0=7;MQRankSum=3.222;QD=27.84;ReadPosRankSum=-0.809;VQSLOD=5.0591;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,34:42:83.29:1018,83,0	0/0:15,0:15:39.03:0,39,368	0/0:26,0:20:54.02:0,54,502	0/0:18,0:13:22.20:0,22,232	0/0:29,0:28:78.11:0,78,751	1/1:2,23:25:66.18:783,66,0	1/1:3,35:38:93.08:1123,93,0	1/1:8,26:33:24.51:816,25,0	0/0:27,0:27:78.11:0,78,747	1/1:4,28:32:78.24:942,78,0	1/1:3,15:18:42.06:489,42,0	1/1:4,30:34:76.99:1016,77,0	1/1:2,12:15:36:415,36,0	1/1:1,13:14:36.11:435,36,0	0/0:17,0:17:51.08:0,51,492	0/0:30,0:30:87.14:0,87,840	0/0:25,0:25:72.12:0,72,695	0/0:23,0:23:66.10:0,66,637	0/0:21,0:20:54.08:0,54,520	0/0:30,0:30:78.08:0,78,736	0/0:27,0:27:75.11:0,75,724	1/1:5,21:26:54.08:628,54,0	1/1:4,15:19:36.11:434,36,0	1/1:0,21:21:57.17:688,57,0	0/0:19,0:19:51.07:0,51,488	0/0:44,0:43:93.13:0,93,898	0/0:31,0:31:84.10:0,84,799	1/1:1,11:12:33.10:399,33,0
chr10	95743244	.	T	TC	1517.61	PASS	AC=22;AF=0.407;AN=54;BaseQRankSum=0.897;DP=234;FS=0.000;HRun=7;HaplotypeScore=33.2215;InbreedingCoeff=0.9173;MQ=77.73;MQ0=0;MQRankSum=-1.425;QD=18.97;ReadPosRankSum=0.194;VQSLOD=2.4455;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:33.05:0,33,319	0/0:4,0:4:9.01:0,9,87	0/0:8,0:8:18.02:0,18,170	0/0:8,0:8:14.60:0,15,121	0/0:8,0:8:21.03:0,21,202	./.	1/1:0,10:10:24.07:290,24,0	1/1:4,8:12:18.65:208,19,0	0/0:12,0:12:30.04:0,30,290	1/1:4,6:10:17.66:215,18,0	1/1:0,4:4:9.03:108,9,0	1/1:5,5:10:12.04:145,12,0	1/1:1,7:9:12.04:145,12,0	1/1:0,9:9:9.03:109,9,0	0/0:10,0:10:27.04:0,27,261	0/0:9,0:9:24.03:0,24,231	0/0:10,0:10:17.98:0,18,162	0/0:6,0:6:14.87:0,15,132	0/0:11,0:11:24.04:0,24,232	0/0:8,0:8:24.03:0,24,226	0/0:22,0:22:48.04:0,48,456	1/1:0,3:3:9.03:109,9,0	1/1:1,2:3:6.02:72,6,0	1/1:1,5:6:15.05:181,15,0	0/0:4,0:4:12.02:0,12,116	0/0:11,0:11:30.05:0,30,290	0/0:10,0:10:23.92:0,24,213	1/1:0,4:4:12.04:145,12,0
chr10	95743551	.	AGACAGATG	A	11544.06	PASS	AB=0.689;AC=23;AF=0.411;AN=56;BaseQRankSum=8.127;DP=913;FS=0.000;HRun=0;HaplotypeScore=285.2314;InbreedingCoeff=0.8932;MQ=55.37;MQ0=5;MQRankSum=-13.226;QD=35.30;ReadPosRankSum=-4.220;VQSLOD=3.0510;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,120,4743	0/0:6,0:6:9.03:0,9,382	0/0:21,0:14:33.11:0,33,935	0/0:25,0:19:29.60:0,30,927	0/0:15,0:15:30.10:0,30,1179	1/1:4,12:16:27.09:659,27,0	1/1:11,25:36:32.92:862,33,0	1/1:13,22:34:63.20:1453,63,0	0/0:44,0:44:99:0,105,4002	1/1:28,22:50:99:2776,114,0	1/1:7,4:11:2.99:66,3,0	1/1:11,27:38:57.20:1485,57,0	1/1:14,15:29:54.17:1197,54,0	1/1:9,29:38:60.21:1546,60,0	0/0:49,0:50:99:0,105,4280	0/0:60,0:60:99:0,138,5389	0/0:49,0:49:99:0,120,4731	0/0:27,0:27:72.14:0,72,2411	0/0:22,0:22:48.16:0,48,1770	0/0:18,0:18:51.11:0,51,1780	0/0:93,0:93:99:0,204,8213	1/1:13,7:20:27.09:659,27,0	1/1:6,5:11:8.61:162,9,0	0/1:17,14:31:6.31:367,0,6	0/0:19,0:19:39.13:0,39,1501	0/0:57,0:57:99:0,163,6094	0/0:25,0:25:63.22:0,63,2376	1/1:6,6:11:12.04:312,12,0
chr10	95743563	.	AGATG	A	4529.60	PASS	AB=0.948;AC=13;AF=0.232;AN=56;BaseQRankSum=14.255;DP=921;FS=0.674;HRun=0;HaplotypeScore=255.8085;InbreedingCoeff=-0.1017;MQ=53.99;MQ0=5;MQRankSum=-13.434;QD=14.07;ReadPosRankSum=-0.281;VQSLOD=4.3000;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,126,3166	0/0:7,0:7:17.94:0,18,446	0/0:24,0:14:39.13:0,39,942	0/0:25,0:17:38.38:0,38,829	0/0:16,0:16:45.15:0,45,1021	0/1:18,2:20:84.84:278,0,85	0/1:40,0:40:99:286,0,140	0/1:32,0:32:99:595,0,161	0/0:46,0:46:99:0,123,3120	0/1:46,6:52:99:1319,0,281	0/1:7,2:9:33.73:34,0,53	0/1:35,0:36:99:410,0,128	0/1:25,1:26:35.74:456,0,36	0/1:40,0:40:86.01:451,0,86	0/0:49,0:49:99:0,114,3016	0/0:60,0:60:99:0,147,3765	0/0:43,0:43:99:0,129,3297	0/0:27,0:27:81.19:0,81,1772	0/0:26,0:26:75.26:0,75,1760	0/0:24,0:24:63.19:0,63,1517	0/0:96,0:96:99:0,235,5985	0/1:16,3:19:21.52:373,0,22	1/1:13,2:15:5.85:107,6,0	0/1:25,0:25:5.89:105,0,6	0/0:15,0:15:39.13:0,39,1000	0/0:62,0:62:99:0,184,4654	0/0:24,0:24:66.23:0,66,1687	0/1:8,0:7:43.63:116,0,44
chr10	95743603	.	A	AGATG	10673.75	PASS	AB=1.000;AC=32;AF=0.593;AN=54;BaseQRankSum=-10.994;DP=967;FS=2.538;HRun=0;HaplotypeScore=278.1185;InbreedingCoeff=0.5132;MQ=51.65;MQ0=25;MQRankSum=3.609;QD=14.97;ReadPosRankSum=1.764;VQSLOD=4.3092;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,2:55:32.73:280,33,0	1/1:3,8:13:14.96:351,15,0	./.	0/0:32,0:13:6.02:0,6,92	1/1:2,15:19:27.01:534,27,0	0/1:22,0:22:8.24:8,0,215	0/1:40,0:40:19.74:70,0,20	1/1:39,0:35:11.16:61,11,0	1/1:21,30:54:66.23:1537,66,0	0/0:41,0:41:11.22:0,11,367	0/0:12,0:12:5.77:0,6,77	0/1:42,0:42:25.81:26,0,453	0/0:37,0:37:35.99:0,36,481	0/1:41,0:41:33.31:33,0,343	1/1:20,31:54:60.21:1419,60,0	1/1:22,42:67:77.90:1844,78,0	0/0:41,0:42:57.64:0,58,861	0/1:23,0:23:2.41:2,0,656	1/1:24,7:26:21.07:452,21,0	1/1:7,7:14:17.98:323,18,0	1/1:44,43:89:60.47:1420,60,0	0/0:19,0:17:21.79:0,22,195	0/1:20,0:20:12.87:13,0,72	0/0:30,0:30:21.24:0,21,186	1/1:2,10:12:12.04:284,12,0	1/1:25,26:52:81.22:1664,81,0	1/1:8,15:23:15.51:350,16,0	0/0:5,0:5:5.99:0,6,48
chr10	95743640	.	GATAGATGT	G	8610.06	PASS	AB=0.972;AC=20;AF=0.357;AN=56;BaseQRankSum=0.869;DP=1025;FS=0.300;HRun=0;HaplotypeScore=315.9319;InbreedingCoeff=0.6617;MQ=58.17;MQ0=21;MQRankSum=-2.627;QD=22.66;ReadPosRankSum=-2.302;VQSLOD=3.3700;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:73,0:73:99:0,139,2578	0/0:13,0:13:13.38:0,13,604	0/0:57,0:21:38.66:0,39,947	0/0:46,0:20:54.12:0,54,756	0/0:24,0:24:59.76:0,60,1512	0/1:20,2:22:39.53:351,0,40	1/1:41,0:41:79.80:1218,80,0	1/1:6,17:21:54:792,54,0	0/0:49,0:49:71.83:0,72,2566	1/1:48,1:49:63.83:1596,64,0	1/1:16,0:16:12.77:323,13,0	0/1:45,0:45:44.94:863,0,45	0/1:35,1:36:92.95:746,0,93	0/1:47,0:47:54.01:718,0,54	0/0:49,0:49:99:0,113,2854	0/0:60,0:60:99:0,126,3782	0/0:30,0:30:84.26:0,84,2884	0/0:30,0:30:90.27:0,90,2716	0/0:21,0:21:13.07:0,13,1263	0/0:17,0:17:8.22:0,8,1012	0/0:74,0:73:99:0,141,3643	1/1:26,0:25:17.96:706,18,0	1/1:22,2:24:26.39:408,26,0	1/1:39,0:39:20.90:621,21,0	0/0:18,0:18:39.13:0,39,865	0/0:54,0:54:34.81:0,35,3437	0/0:30,0:30:52.97:0,53,1320	1/1:10,2:12:12.04:267,12,0
chr10	95743718	.	T	TAGAC	16293.41	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-15.059;DP=1045;FS=1.257;HRun=0;HaplotypeScore=180.3420;InbreedingCoeff=0.9989;MQ=59.48;MQ0=0;MQRankSum=-4.272;QD=39.84;ReadPosRankSum=1.356;VQSLOD=5.2701;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:70,0:70:99:0,150,2438	0/0:12,0:12:36.12:0,36,620	0/0:41,0:34:68.86:0,69,942	0/0:33,0:25:36.90:0,37,660	0/0:20,0:20:51.17:0,51,864	1/1:1,13:14:24.08:605,24,0	1/1:11,30:46:53.86:1326,54,0	1/1:12,23:38:72.09:1387,72,0	0/0:47,0:47:99:0,120,1978	1/1:11,50:61:99:3178,144,0	1/1:2,17:20:26.88:684,27,0	1/1:8,37:45:75.51:1903,76,0	1/1:6,31:37:84.29:2118,84,0	1/1:4,29:34:56.98:1361,57,0	0/0:43,0:43:99:0,117,1955	0/0:45,0:44:99:0,114,1913	0/0:39,0:39:99:0,108,1760	0/0:31,0:31:87.28:0,87,1449	0/0:25,0:25:51.15:0,51,803	0/0:21,0:21:48.12:0,48,773	0/0:87,0:87:99:0,207,3339	1/1:5,13:19:20.97:533,21,0	1/1:3,17:20:36.12:913,36,0	1/1:11,40:53:59.59:1523,60,0	0/0:25,0:25:63.17:0,63,1013	0/0:62,1:63:83.13:0,83,2481	0/0:33,0:31:90.31:0,90,1547	1/1:3,18:21:30.10:761,30,0
chr10	95744204	.	T	TG	2729.38	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=14.116;DP=565;FS=3.392;HRun=3;HaplotypeScore=71.4916;InbreedingCoeff=0.9096;MQ=81.93;MQ0=0;MQRankSum=-0.364;QD=11.82;ReadPosRankSum=2.552;VQSLOD=2.1560;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:58.47:0,58,801	0/0:11,0:11:26.57:0,27,294	0/0:14,0:14:42.11:0,42,477	0/0:17,0:17:39.08:0,39,436	0/0:8,0:8:21.04:0,21,232	1/1:16,0:16:28.93:166,29,0	1/1:25,0:25:37.93:291,38,0	1/1:24,0:24:33.04:283,33,0	0/0:19,0:19:54.17:0,54,647	1/1:17,2:19:42.11:245,42,0	1/1:5,3:8:23.62:222,24,0	1/1:29,2:31:50.85:397,51,0	1/1:22,0:22:60.57:353,61,0	0/1:24,0:24:16.21:178,0,16	0/0:12,0:12:36.11:0,36,431	0/0:11,0:11:30.05:0,30,333	0/0:46,0:46:99:0,129,1477	0/0:29,0:29:87.23:0,87,1016	0/0:16,0:16:42.12:0,42,493	0/0:10,0:10:27.07:0,27,311	0/0:64,0:64:99:0,177,2070	1/1:13,2:15:35.04:237,35,0	1/1:4,2:6:14.69:123,15,0	1/1:33,0:33:6.49:319,6,0	0/0:15,0:15:45.14:0,45,540	0/0:21,0:21:60.03:0,60,640	0/0:15,0:15:42.11:0,42,491	1/1:7,1:8:20.38:137,20,0
chr10	95744207	.	G	GT	7438.82	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-12.769;DP=568;FS=1.917;HRun=4;HaplotypeScore=56.6988;InbreedingCoeff=0.9960;MQ=81.42;MQ0=0;MQRankSum=-0.593;QD=31.79;ReadPosRankSum=2.697;VQSLOD=5.3675;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.01:0,75,804	0/0:11,0:11:30:0,30,314	0/0:14,0:14:39.06:0,39,403	0/0:17,0:17:41.16:0,41,406	0/0:7,0:7:21.06:0,21,237	1/1:2,14:18:33.09:433,33,0	1/1:3,27:30:60.20:820,60,0	1/1:1,22:24:66.19:866,66,0	0/0:18,0:18:54.13:0,54,593	1/1:4,13:17:45.15:605,45,0	1/1:5,4:9:24.01:284,24,0	1/1:3,27:30:75.25:1023,75,0	1/1:0,23:24:63.21:858,63,0	1/1:3,18:21:45.15:615,45,0	0/0:12,0:12:36.08:0,36,389	0/0:11,0:11:27.07:0,27,306	0/0:46,0:46:99:0,123,1355	0/0:30,0:30:84.18:0,84,926	0/0:16,0:16:42.11:0,42,461	0/0:12,0:12:36.07:0,36,380	0/0:62,0:62:99:0,183,2027	1/1:2,14:16:36.11:466,36,0	1/1:3,3:6:15.05:200,15,0	1/1:3,29:32:72.24:984,72,0	0/0:15,0:15:45.11:0,45,499	0/0:22,0:22:56.99:0,57,598	0/0:14,0:14:39.11:0,39,441	1/1:1,6:7:21.07:284,21,0
chr10	95744303	.	TG	T	912.73	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.408;DP=550;FS=1.559;HRun=4;HaplotypeScore=55.2827;InbreedingCoeff=0.9658;MQ=80.87;MQ0=0;MQRankSum=-2.900;QD=31.47;ReadPosRankSum=1.393;VQSLOD=4.1097;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:84.26:1008,84,0	0/0:10,0:10:30.10:0,30,419	0/0:16,0:16:42.14:0,42,565	0/0:15,0:15:32.93:0,33,368	0/0:10,0:10:30.08:0,30,400	0/0:19,0:19:57.19:0,57,798	0/0:38,0:38:99:0,108,1450	0/0:19,0:19:57.17:0,57,765	0/0:18,0:18:54.16:0,54,738	0/0:20,0:20:56.92:0,57,782	0/0:10,0:10:30.10:0,30,412	0/0:22,0:22:66.21:0,66,907	0/0:16,0:16:42.14:0,42,586	0/0:24,0:24:72.24:0,72,1006	0/0:11,0:11:33.11:0,33,462	0/0:13,0:13:33.11:0,33,460	0/0:28,0:28:78.23:0,78,1058	0/0:24,0:24:69.23:0,69,966	0/0:18,0:18:54.17:0,54,741	0/0:11,0:11:24.08:0,24,334	0/0:72,0:72:99:0,211,2849	0/0:11,0:11:33.11:0,33,461	0/0:14,0:14:39.13:0,39,546	0/0:29,0:29:81.27:0,81,1134	0/0:14,0:14:39.13:0,39,546	0/0:19,0:19:57.18:0,57,783	0/0:16,0:16:48.16:0,48,672	0/0:4,0:4:12.04:0,12,168
chr10	95745837	.	TGC	T	2890.90	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=-3.725;DP=453;FS=0.493;HRun=0;HaplotypeScore=76.0125;InbreedingCoeff=0.6996;MQ=61.38;MQ0=33;MQRankSum=2.895;QD=13.14;ReadPosRankSum=0.347;VQSLOD=3.2988;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:62.75:0,63,626	0/0:4,0:4:8.97:0,9,92	0/1:34,0:11:6.33:6,0,31	0/0:23,0:11:13.08:0,13,150	0/0:5,0:3:3:0,3,25	1/1:11,0:11:23.99:231,24,0	1/1:26,0:23:53.56:467,54,0	1/1:10,10:18:45.92:393,46,0	0/0:21,0:19:41.89:0,42,525	1/1:6,7:12:32.03:321,32,0	1/1:15,0:14:36.50:422,37,0	1/1:17,0:16:0.89:2,1,0	1/1:11,0:11:29.65:340,30,0	1/1:8,0:8:24.03:269,24,0	0/0:22,0:22:44.99:0,45,565	0/0:15,0:15:14.83:0,15,111	0/0:20,0:19:44.85:0,45,524	0/0:17,0:15:44.42:0,44,492	0/0:15,0:15:38.32:0,38,331	0/0:6,0:6:9.79:0,10,82	0/0:23,0:20:26.62:0,27,240	1/1:5,0:5:4.36:48,4,0	1/1:8,0:8:18.01:196,18,0	1/1:24,0:24:36.70:321,37,0	0/0:12,0:12:23.78:0,24,275	0/1:20,0:19:21.61:22,0,318	0/0:14,0:13:8.07:0,8,83	0/1:8,0:6:12.51:61,0,13
chr10	95745838	.	GCGCA	G	1967.27	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=-2.971;DP=453;FS=3.002;HRun=0;HaplotypeScore=89.7439;InbreedingCoeff=0.5623;MQ=60.06;MQ0=34;MQRankSum=1.722;QD=10.93;ReadPosRankSum=0.052;VQSLOD=2.7326;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:62.80:0,63,859	0/0:4,0:4:8.98:0,9,133	0/1:33,0:10:5.55:6,0,33	0/0:22,0:10:13.08:0,13,150	0/0:5,0:3:3:0,3,25	1/1:11,0:11:23.87:184,24,0	1/1:26,0:23:51.43:398,51,0	1/1:20,0:18:12.85:336,13,0	0/0:21,0:19:41.92:0,42,781	1/1:12,0:11:15.75:243,16,0	1/1:15,0:14:13.25:213,13,0	0/0:2,14:15:2.98:0,3,22	1/1:11,0:11:0.70:167,1,0	1/1:8,0:8:23.78:179,24,0	0/0:22,0:22:44.99:0,45,828	0/0:15,0:15:14.79:0,15,111	0/0:23,0:21:47.86:0,48,826	0/0:18,0:16:44.64:0,45,772	0/0:17,0:16:38.32:0,38,403	0/0:5,0:5:9.79:0,10,106	0/0:23,0:20:26.60:0,27,287	0/1:5,0:5:18.21:18,0,19	1/1:8,0:8:17.93:171,18,0	0/1:23,0:23:33.77:187,0,34	0/0:12,0:12:23.89:0,24,376	0/0:20,0:19:5.02:0,5,424	0/0:14,0:13:8.06:0,8,83	0/1:8,0:6:54.67:58,0,55
chr10	95745840	.	G	GCACACACA	3424.01	PASS	AB=0.922;AC=28;AF=0.519;AN=54;BaseQRankSum=-3.872;DP=493;FS=15.352;HRun=0;HaplotypeScore=127.0458;InbreedingCoeff=0.5736;MQ=55.29;MQ0=37;MQRankSum=-3.065;QD=11.01;ReadPosRankSum=-2.491;VQSLOD=0.5746;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:36:10.46:10,0,427	1/1:5,0:4:6.02:137,6,0	1/1:33,0:10:0.47:1,0,0	./.	0/1:5,2:5:0:0,0,0	0/0:12,0:12:6.02:0,6,118	0/0:24,0:21:5.38:0,5,115	1/1:22,0:20:20.87:270,21,0	1/1:25,0:23:30.05:604,30,0	0/0:12,0:11:15.05:0,15,294	0/0:16,0:15:24.08:0,24,465	0/0:19,0:18:2.94:0,3,62	0/0:11,0:11:21.07:0,21,398	0/0:8,0:8:12.04:0,12,232	1/1:27,0:26:32.70:829,33,0	1/1:8,9:18:4.83:78,5,0	0/0:23,0:20:29.75:0,30,477	0/1:20,0:18:1.59:2,0,374	1/1:14,0:14:12.04:291,12,0	1/1:8,0:7:5.61:105,6,0	1/1:25,0:21:6.02:129,6,0	0/0:7,0:7:3.01:0,3,62	0/0:8,0:8:9.03:0,9,150	0/0:23,0:23:21.43:0,21,297	1/1:16,0:14:12.04:283,12,0	0/1:24,0:24:8.70:434,0,9	1/1:11,6:16:2.90:16,3,0	1/1:10,0:8:12.04:234,12,0
chr10	95745877	.	C	CGAGAGAG	1427.76	PASS	AB=1.000;AC=17;AF=0.327;AN=52;BaseQRankSum=4.630;DP=538;FS=13.299;HRun=0;HaplotypeScore=151.7050;InbreedingCoeff=-0.3136;MQ=43.08;MQ0=36;MQRankSum=-2.998;QD=4.92;ReadPosRankSum=-5.218;VQSLOD=-0.1346;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:53:18.83:0,19,539	0/1:7,0:5:23.05:23,0,70	./.	./.	0/1:13,0:8:0:0,0,0	0/0:12,0:16:8.36:0,8,56	0/1:30,0:26:99:208,0,105	0/1:26,0:23:98.84:99,0,584	0/0:23,0:20:26.89:0,27,350	0/1:17,0:16:99:208,0,227	0/0:18,0:18:23.94:0,24,206	0/1:21,0:20:68.36:68,0,103	0/1:17,0:16:99:102,0,112	0/1:7,0:7:39.34:39,0,98	0/0:30,0:29:32.69:0,33,427	1/1:19,0:19:2.07:47,2,0	0/0:30,0:26:66.14:0,66,1282	0/0:22,0:20:54.11:0,54,1003	0/1:14,0:13:99:182,0,233	0/0:9,0:8:2.90:0,3,39	0/1:26,0:19:20:20,0,70	0/1:9,0:8:31.82:84,0,32	0/0:12,0:12:11.96:0,12,143	0/1:26,0:26:83.17:125,0,83	0/0:20,2:27:11.97:0,12,154	0/1:21,0:21:99:201,0,492	0/1:19,0:17:93.58:163,0,94	0/1:18,0:12:3.11:3,0,273
chr10	95745908	.	A	AGC	1172.59	PASS	AB=0.853;AC=16;AF=0.286;AN=56;BaseQRankSum=-0.263;DP=654;FS=2.293;HRun=0;HaplotypeScore=123.6053;InbreedingCoeff=0.3701;MQ=51.33;MQ0=23;MQRankSum=3.192;QD=4.73;ReadPosRankSum=2.600;VQSLOD=3.0079;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:54:41.52:0,42,357	1/1:3,6:7:3.01:33,3,0	0/0:8,0:7:5.20:0,5,98	0/0:21,0:15:17.07:0,17,262	1/1:16,0:12:12.06:86,12,0	0/0:26,0:26:21.66:0,22,177	0/0:36,0:34:43.76:0,44,369	0/0:29,0:28:82.03:0,82,635	0/0:11,13:25:9.44:0,9,69	0/0:22,0:21:60.17:0,60,495	0/0:23,0:23:35.93:0,36,294	0/0:19,0:19:24.84:0,25,192	0/0:17,0:16:17.38:0,17,125	0/0:13,0:13:29.81:0,30,231	1/1:22,0:21:17.92:142,18,0	1/1:20,0:21:26.46:224,26,0	0/0:29,0:27:65.62:0,66,706	0/0:24,0:21:57.96:0,58,567	0/1:12,0:30:99:306,0,110	0/1:11,3:13:26.96:29,0,27	1/1:11,0:20:2.90:38,3,0	0/0:18,0:17:23.20:0,23,182	0/0:15,0:15:26.92:0,27,223	0/1:31,0:31:18.59:19,0,168	0/1:28,0:28:25.13:73,0,25	0/1:21,9:30:99:254,0,203	0/1:17,0:15:17.64:145,0,18	0/0:25,0:19:47.58:0,48,336
chr10	95747230	.	AATCATCATCATCATC	A	446.27	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=3.781;DP=480;FS=2.902;HRun=0;HaplotypeScore=197.0358;InbreedingCoeff=0.0205;MQ=71.93;MQ0=6;MQRankSum=0.800;QD=3.88;ReadPosRankSum=-0.673;VQSLOD=2.6132;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,18:31:3.21:479,3,0	0/0:10,0:10:9.01:0,9,101	0/0:27,0:19:6.02:0,6,102	0/0:26,0:19:5.13:0,5,63	0/0:21,0:21:16.15:0,16,159	0/0:11,0:11:3.77:0,4,158	0/0:18,0:17:16.82:0,17,288	0/0:19,0:19:18.95:0,19,124	0/0:13,0:13:14.86:0,15,207	0/0:15,0:15:17.85:0,18,221	0/1:15,0:15:26.37:26,0,81	0/0:20,0:20:0.68:0,1,280	0/1:10,0:10:1.22:1,0,126	0/0:13,0:13:0.13:0,0,137	0/0:9,0:9:17.50:0,18,109	0/0:15,0:15:26.60:0,27,223	0/0:25,0:25:57.16:0,57,2091	0/1:22,0:21:37.74:38,0,1504	0/0:10,0:11:9.03:0,9,274	0/0:14,0:13:9.49:0,9,142	0/0:32,0:32:17.98:0,18,252	0/1:12,0:12:3.90:4,0,50	0/0:11,0:11:8.95:0,9,168	0/1:25,0:25:4.78:5,0,155	0/0:13,0:13:6:0,6,55	0/0:16,0:16:27:0,27,497	0/0:20,0:19:26.95:0,27,328	0/0:5,0:5:2.60:0,3,10
chr10	95747274	.	TCAC	T	900.23	PASS	AB=0.778;AC=14;AF=0.259;AN=54;BaseQRankSum=2.137;DP=395;FS=1.403;HRun=0;HaplotypeScore=77.0560;InbreedingCoeff=-0.0219;MQ=44.97;MQ0=46;MQRankSum=-2.763;QD=4.74;ReadPosRankSum=1.483;VQSLOD=1.3684;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:26:63.35:63,0,65	0/1:3,0:3:13:18,0,13	./.	0/1:7,0:2:0.85:1,0,17	1/1:11,1:12:5.99:49,6,0	0/0:8,0:6:14.93:0,15,177	0/0:22,0:18:20.63:0,21,345	0/0:22,0:14:34.48:0,34,229	0/1:5,9:13:42.68:109,0,43	0/0:14,0:10:28.89:0,29,309	0/0:5,0:5:8.93:0,9,91	0/0:14,0:13:15.04:0,15,271	0/0:4,0:4:11.91:0,12,190	0/0:11,0:10:20.99:0,21,249	0/1:5,9:14:7.01:226,0,7	0/1:12,3:15:65.09:313,0,65	0/0:23,0:21:34.95:0,35,883	0/0:14,0:12:25.13:0,25,574	0/0:17,0:9:22.92:0,23,186	1/1:5,7:10:2.94:18,3,0	0/1:23,16:29:15.22:15,0,57	0/0:7,0:4:9.01:0,9,126	0/0:8,0:6:9.48:0,9,140	0/0:26,0:26:32.16:0,32,267	0/1:6,8:13:15.04:15,0,33	0/1:7,5:11:99:143,0,136	0/1:10,9:19:77.21:77,0,99	0/0:3,0:2:2.88:0,3,15
chr10	95747286	.	CCAT	C	1353.95	PASS	AC=36;AF=0.750;AN=48;BaseQRankSum=2.836;DP=369;FS=0.000;HRun=0;HaplotypeScore=67.3654;InbreedingCoeff=0.6183;MQ=41.39;MQ0=54;MQRankSum=-1.137;QD=5.15;ReadPosRankSum=0.132;VQSLOD=1.6603;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:23:22.37:0,22,173	0/0:2,0:1:2.97:0,3,20	./.	0/0:6,0:2:6:0,6,53	1/1:4,6:10:5.77:31,6,0	1/1:8,0:4:5.77:39,6,0	1/1:19,0:15:10.08:114,10,0	1/1:15,10:16:24.14:156,24,0	1/1:15,0:14:12.60:77,13,0	1/1:13,0:8:13.87:78,14,0	1/1:2,0:2:2.99:24,3,0	./.	1/1:5,0:4:3:26,3,0	1/1:8,0:7:14.65:103,15,0	1/1:13,1:14:17.79:104,18,0	1/1:16,0:16:30.21:178,30,0	0/0:18,0:16:18.84:0,19,282	0/0:16,0:13:13.71:0,14,216	1/1:18,0:11:26.53:186,27,0	./.	1/1:40,0:29:3.85:26,4,0	1/1:7,0:4:2.50:9,2,0	0/0:6,0:4:0.47:0,0,1	1/1:26,0:25:16.26:104,16,0	1/1:11,0:10:1.06:36,1,0	1/1:12,0:10:15.34:77,15,0	1/1:14,0:13:3.15:136,3,0	./.
chr10	95747292	.	TCATCAC	T	1786.30	PASS	AC=36;AF=0.750;AN=48;BaseQRankSum=2.834;DP=342;FS=0.000;HRun=0;HaplotypeScore=68.1029;InbreedingCoeff=0.6415;MQ=40.25;MQ0=54;MQRankSum=-0.555;QD=7.32;ReadPosRankSum=0.251;VQSLOD=1.4606;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:24:23.44:0,23,247	0/0:2,0:1:3.01:0,3,36	./.	0/0:6,0:2:6:0,6,53	1/1:9,0:9:5.77:31,6,0	1/1:8,0:4:5.26:39,5,0	1/1:18,0:14:10.24:114,10,0	1/1:22,0:13:23.71:158,24,0	1/1:14,0:13:15.50:107,16,0	1/1:5,8:8:12.45:140,12,0	1/1:2,0:2:2.99:24,3,0	./.	1/1:3,0:2:3:26,3,0	1/1:7,0:6:14.65:103,15,0	1/1:15,0:15:18.07:105,18,0	1/1:14,0:14:29.09:267,29,0	0/0:15,0:13:21.39:0,21,295	0/0:18,0:15:19.30:0,19,327	1/1:16,0:10:26.46:185,26,0	./.	1/1:41,0:29:2.52:23,3,0	1/1:5,0:3:3.01:48,3,0	0/0:4,0:2:0.47:0,0,1	1/1:2,22:25:17.94:299,18,0	1/1:9,0:8:1.20:35,1,0	1/1:10,0:8:15.34:77,15,0	1/1:11,1:11:17.44:157,17,0	./.
chr10	95749026	.	A	ATCTG	7053.64	PASS	AB=0.973;AC=15;AF=0.268;AN=56;BaseQRankSum=14.517;DP=1027;FS=19.123;HRun=0;HaplotypeScore=320.7733;InbreedingCoeff=0.3583;MQ=50.42;MQ0=5;MQRankSum=-15.163;QD=17.00;ReadPosRankSum=-0.975;VQSLOD=2.8472;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:36:99:358,0,114	0/0:18,0:18:51.17:0,51,962	0/0:41,0:29:77.03:0,77,1323	0/0:46,0:31:37.31:0,37,1361	0/0:45,0:45:99:0,129,2451	1/1:35,0:35:20.86:701,21,0	0/1:25,0:25:99:393,0,206	0/0:36,0:36:99:0,102,1887	0/0:42,0:42:99:0,126,2396	0/1:63,0:60:99:1430,0,439	1/1:23,2:24:30.06:555,30,0	0/1:37,2:38:99:646,0,173	0/1:33,2:34:99:815,0,155	0/1:38,3:41:62.70:936,0,63	0/0:54,0:54:99:0,154,2895	0/0:34,0:34:99:0,102,1916	0/0:23,0:23:63.21:0,63,1116	0/0:37,0:37:99:0,108,1977	0/0:17,0:17:48.10:0,48,839	0/0:40,0:40:99:0,111,2025	0/0:51,0:51:99:0,129,2393	1/1:51,1:53:16.03:800,16,0	1/1:36,2:37:25.06:367,25,0	0/1:21,0:21:54.11:54,0,62	0/0:27,0:27:72.24:0,72,1341	0/0:47,0:47:97.56:0,98,2543	0/0:33,0:33:99:0,99,1843	0/0:20,0:20:54.16:0,54,974
chr10	95749032	.	CCATT	C	2091.50	PASS	AB=0.943;AC=16;AF=0.286;AN=56;BaseQRankSum=20.196;DP=1001;FS=7.041;HRun=0;HaplotypeScore=332.4321;InbreedingCoeff=0.4562;MQ=49.72;MQ0=3;MQRankSum=-18.803;QD=5.22;ReadPosRankSum=1.134;VQSLOD=0.4732;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:35:33.52:243,34,0	0/0:16,0:16:48.16:0,48,1290	0/0:40,0:27:70.10:0,70,1735	0/0:39,0:22:59.27:0,59,1298	0/0:47,0:47:99:0,137,3517	1/1:34,1:35:22.07:221,22,0	0/1:17,6:23:83.71:253,0,84	0/0:34,0:34:99:0,102,2443	0/0:44,0:44:99:0,131,3435	0/1:59,2:58:99:202,0,230	0/1:22,1:22:5.80:6,0,88	1/1:31,6:36:39.18:443,39,0	1/1:31,2:33:17.16:271,17,0	1/1:36,6:41:3.02:423,3,0	0/0:51,0:51:99:0,150,3977	0/0:35,0:35:99:0,105,2796	0/0:24,0:24:60.44:0,60,1471	0/0:38,1:39:64.86:0,65,2766	0/0:17,0:17:48.14:0,48,1131	0/0:38,0:38:99:0,114,2803	0/0:55,0:56:99:0,156,3666	0/1:51,2:53:46.85:171,0,47	0/1:35,1:35:29.09:29,0,32	0/1:20,0:20:10:10,0,45	0/0:24,0:24:69.21:0,69,1823	0/0:46,0:46:99:0,133,3664	0/0:33,0:33:99:0,99,2571	0/0:17,0:17:51.17:0,51,1313
chr10	95749035	.	TTTGA	T	9693.52	PASS	AB=0.624;AC=14;AF=0.250;AN=56;BaseQRankSum=19.388;DP=980;FS=1.290;HRun=0;HaplotypeScore=298.2153;InbreedingCoeff=0.2451;MQ=49.83;MQ0=3;MQRankSum=-17.152;QD=25.51;ReadPosRankSum=1.203;VQSLOD=3.8518;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,17:31:37.43:567,37,0	0/0:16,0:16:48.16:0,48,1385	0/0:40,0:26:69.20:0,69,1781	0/0:39,0:21:61.42:0,61,1377	0/0:44,0:44:99:0,131,3571	0/1:6,25:31:0.47:1237,0,0	0/1:12,10:22:99:501,0,172	0/0:34,0:34:99:0,102,2855	0/0:44,0:44:99:0,132,3734	0/1:18,41:56:99:2076,0,584	1/1:7,15:21:22.51:377,23,0	0/1:19,18:36:99:1123,0,217	0/1:8,23:31:99:1151,0,190	0/1:17,24:40:36.82:1211,0,37	0/0:52,0:52:99:0,154,4311	0/0:35,0:35:99:0,102,2839	0/0:24,1:25:9.40:0,9,1912	0/0:40,0:40:62.54:0,63,3053	0/0:17,1:18:51.17:0,51,1372	0/0:38,0:38:99:0,114,3089	0/0:61,0:61:99:0,172,4892	1/1:11,39:50:0.45:1076,0,0	0/1:12,22:33:9.19:315,0,9	0/1:10,9:19:59.85:60,0,60	0/0:24,0:24:69.24:0,69,1944	0/0:42,1:43:66.57:0,67,3574	0/0:34,0:34:99:0,102,2793	0/0:13,0:13:39.13:0,39,1105
chr10	95749046	.	G	GTCCA	3931.28	PASS	AB=0.893;AC=12;AF=0.214;AN=56;BaseQRankSum=10.298;DP=1031;FS=13.754;HRun=0;HaplotypeScore=362.4630;InbreedingCoeff=-0.0200;MQ=47.11;MQ0=4;MQRankSum=-12.794;QD=8.91;ReadPosRankSum=-4.256;VQSLOD=0.9970;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:37,2:36:55.06:114,0,55	0/0:16,0:16:36.12:0,36,614	0/0:34,0:21:16.43:0,16,267	0/0:42,0:19:18.08:0,18,394	0/0:40,0:40:78.22:0,78,1250	0/1:34,7:41:99:325,0,430	0/1:22,1:23:99:152,0,199	0/0:35,0:35:84.27:0,84,1356	0/0:41,0:41:99:0,105,1791	0/1:52,11:60:99:935,0,681	0/1:20,3:22:3.45:42,0,3	0/1:36,8:44:99:702,0,163	0/1:35,7:42:99:795,0,167	0/1:40,6:45:99:552,0,395	0/0:49,0:49:99:0,117,1984	0/0:36,0:36:93.32:0,93,1564	0/0:28,0:28:72.25:0,72,1219	0/0:42,0:42:72.85:0,73,1638	0/0:17,0:16:27.09:0,27,461	0/0:33,0:33:78.23:0,78,1321	0/0:68,0:68:99:0,168,2861	0/1:50,6:55:99:107,0,203	1/1:33,9:40:4.02:129,4,0	0/1:20,1:21:5.34:80,0,5	0/0:23,0:23:60.19:0,60,993	0/0:42,0:42:99:0,100,1638	0/0:32,0:32:66.21:0,66,1099	0/0:12,0:12:36.12:0,36,614
chr10	95749048	.	C	CCAT	1965.28	PASS	AB=0.931;AC=10;AF=0.179;AN=56;BaseQRankSum=8.102;DP=1030;FS=27.079;HRun=0;HaplotypeScore=355.1457;InbreedingCoeff=-0.2184;MQ=47.13;MQ0=5;MQRankSum=-9.874;QD=4.66;ReadPosRankSum=0.863;VQSLOD=1.1736;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,6:38:99:226,0,338	0/0:16,0:16:45.09:0,45,674	0/0:34,0:20:28.59:0,29,549	0/0:41,0:17:36.05:0,36,517	0/0:37,0:37:99:0,108,1631	0/1:41,1:42:99:106,0,632	0/1:16,7:23:99:256,0,297	0/0:35,0:35:96.32:0,96,1530	0/0:39,0:39:99:0,117,1889	0/1:60,2:59:99:281,0,1260	0/0:23,1:23:6.28:0,6,108	0/1:40,3:44:99:453,0,498	0/1:41,2:43:99:266,0,749	0/1:46,4:49:99:395,0,591	0/0:49,0:49:99:0,135,2172	0/0:36,0:36:99:0,102,1630	0/0:28,0:28:78.23:0,78,1240	0/0:41,0:41:99:0,111,1704	0/0:16,0:15:42.13:0,42,639	0/0:33,0:33:87.30:0,87,1404	0/0:70,0:70:99:0,180,2893	0/1:54,2:55:98.01:98,0,311	0/1:38,1:38:8:8,0,105	0/1:21,0:21:19.89:20,0,30	0/0:24,0:24:66.23:0,66,1066	0/0:41,0:41:99:0,123,1950	0/0:32,0:32:87.27:0,87,1344	0/0:12,0:12:36.12:0,36,588
chr10	95749072	.	C	CCAT	5316.20	PASS	AB=0.813;AC=11;AF=0.196;AN=56;BaseQRankSum=11.290;DP=1030;FS=14.742;HRun=0;HaplotypeScore=348.8538;InbreedingCoeff=-0.2443;MQ=47.47;MQ0=8;MQRankSum=-14.385;QD=11.24;ReadPosRankSum=0.405;VQSLOD=3.4607;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:34,4:37:99:337,0,533	0/0:16,0:16:45.14:0,45,707	0/0:24,0:4:9.03:0,9,137	0/0:35,0:10:5.80:0,6,212	0/0:34,0:34:93.30:0,93,1479	0/1:27,14:41:99:805,0,667	0/1:25,4:29:99:209,0,254	0/0:37,0:36:96.31:0,96,1495	0/0:41,0:41:99:0,114,1826	0/1:51,13:64:99:1023,0,1413	0/1:19,9:27:99:205,0,301	0/1:37,13:49:99:716,0,940	0/1:41,5:46:99:378,0,1172	0/1:36,17:52:99:1041,0,1008	0/0:42,0:42:99:0,120,1932	0/0:45,0:45:99:0,132,2103	0/0:31,0:31:84.29:0,84,1353	0/0:36,0:36:62.88:0,63,1272	0/0:14,0:11:30.10:0,30,485	0/0:28,0:28:75.24:0,75,1201	0/0:71,0:71:99:0,187,2986	0/1:40,17:55:99:387,0,477	0/1:29,11:37:3.15:3,0,470	0/1:21,6:27:99:211,0,483	0/0:28,0:27:75.26:0,75,1208	0/0:41,0:41:99:0,114,1772	0/0:21,0:21:63.22:0,63,1029	0/0:12,0:12:30.10:0,30,468
chr10	95749094	.	G	GTCCA	10340.13	PASS	AB=0.700;AC=12;AF=0.214;AN=56;BaseQRankSum=10.370;DP=1041;FS=16.260;HRun=0;HaplotypeScore=314.0031;InbreedingCoeff=0.1486;MQ=54.02;MQ0=7;MQRankSum=-6.846;QD=24.56;ReadPosRankSum=-0.513;VQSLOD=3.4887;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:36:43.53:0,44,386	0/0:18,0:18:27.09:0,27,448	0/0:40,0:19:22.51:0,23,460	0/0:44,0:19:19.68:0,20,551	0/0:32,0:32:60.20:0,60,969	0/1:32,8:40:99:1013,0,123	0/1:11,13:24:99:376,0,135	0/0:33,0:32:63.19:0,63,960	0/0:46,0:46:99:0,99,1614	0/1:44,20:64:99:1825,0,165	1/1:15,10:26:22.01:477,22,0	0/1:25,23:50:99:1232,0,284	0/1:21,25:47:64.59:1473,0,65	0/1:25,26:51:99:1499,0,438	0/0:44,0:44:87.25:0,87,1340	0/0:46,0:46:99:0,108,1759	0/0:33,0:33:81.16:0,81,1253	0/0:33,0:33:49.50:0,50,1139	0/0:15,0:13:27.07:0,27,401	0/0:28,0:28:60.14:0,60,941	0/0:73,0:73:99:0,171,2709	0/1:29,13:43:43.62:961,0,44	1/1:26,11:35:35.87:619,36,0	0/1:16,21:36:68.56:865,0,69	0/0:25,0:24:54.18:0,54,868	0/0:41,0:41:90.26:0,90,1374	0/0:21,0:21:48.16:0,48,788	0/0:9,0:9:18.06:0,18,298
chr10	95750004	.	G	GTTCA	15742.77	PASS	AB=0.603;AC=25;AF=0.446;AN=56;BaseQRankSum=3.193;DP=781;FS=2.913;HRun=0;HaplotypeScore=130.5847;InbreedingCoeff=0.9240;MQ=69.16;MQ0=2;MQRankSum=-0.852;QD=41.21;ReadPosRankSum=0.692;VQSLOD=4.9389;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,28:50:69.24:1648,69,0	1/1:6,10:16:24.08:523,24,0	0/0:19,0:17:18.06:0,18,263	0/0:22,0:17:13.86:0,14,193	1/1:12,24:36:69.24:1629,69,0	0/0:26,0:26:54.18:0,54,867	0/0:35,0:35:48.13:0,48,719	0/0:42,0:42:48.15:0,48,744	1/1:5,27:33:69.24:1663,69,0	0/0:32,0:31:63.18:0,63,931	0/0:25,0:25:45.15:0,45,725	0/0:28,0:28:54.18:0,54,869	0/0:23,0:23:45.13:0,45,699	0/0:36,0:36:59.93:0,60,937	1/1:17,26:42:69.24:1649,69,0	1/1:9,13:23:30.10:708,30,0	0/0:33,0:33:78.27:0,78,1253	0/0:19,0:19:30.10:0,30,473	1/1:15,10:27:42.08:876,42,0	1/1:8,19:29:57.20:1341,57,0	1/1:6,19:26:48.16:1157,48,0	0/0:20,0:21:48.16:0,48,772	0/0:22,0:22:51.16:0,51,793	0/0:16,0:16:36.12:0,36,574	1/1:7,13:21:39.13:940,39,0	0/1:12,23:35:19.91:1585,0,20	1/1:7,20:28:54.19:1301,54,0	1/1:4,10:14:30.10:723,30,0
chr10	95751573	.	TAAAA	T	6776.74	PASS	AB=0.588;AC=43;AF=0.768;AN=56;BaseQRankSum=3.346;DP=460;FS=7.993;HRun=16;HaplotypeScore=84.3483;InbreedingCoeff=0.8271;MQ=58.46;MQ0=9;MQRankSum=-0.872;QD=21.72;ReadPosRankSum=3.742;VQSLOD=3.6524;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,1:28:5.62:306,6,0	1/1:1,8:9:14.93:197,15,0	0/0:20,0:4:6.02:0,6,134	0/0:25,0:8:11.64:0,12,113	1/1:7,9:16:19.90:448,20,0	1/1:4,17:21:36.07:467,36,0	1/1:2,7:9:14.65:197,15,0	0/0:32,0:29:55.81:0,56,994	1/1:1,4:6:12.01:142,12,0	1/1:6,11:16:32.95:391,33,0	1/1:4,16:22:46.20:561,46,0	1/1:0,3:3:6.02:79,6,0	1/1:2,7:9:14.57:196,15,0	1/1:0,10:10:21.07:276,21,0	1/1:2,8:10:12.01:158,12,0	1/1:0,15:15:30.09:380,30,0	0/0:26,0:28:63.16:0,63,1260	0/0:17,0:19:51.12:0,51,867	1/1:6,12:18:35.80:428,36,0	1/1:5,16:20:39.81:496,40,0	1/1:3,8:12:17.96:221,18,0	1/1:1,3:4:5.98:79,6,0	0/1:3,5:10:1.34:127,0,1	1/1:1,9:10:14.47:196,14,0	1/1:3,10:14:31.22:391,31,0	1/1:5,18:23:50.91:577,51,0	1/1:4,21:25:30.23:464,30,0	0/0:20,0:23:64.20:0,64,1132
chr10	95752293	.	AC	A	2459.58	PASS	AB=0.758;AC=21;AF=0.375;AN=56;BaseQRankSum=-11.688;DP=563;FS=12.540;HRun=11;HaplotypeScore=145.6656;InbreedingCoeff=0.6709;MQ=71.39;MQ0=0;MQRankSum=8.023;QD=10.25;ReadPosRankSum=3.269;VQSLOD=1.3482;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:2.80:0,3,14	1/1:3,6:9:17.97:147,18,0	0/0:17,1:18:14.40:0,14,282	0/1:20,0:20:1.06:1,0,202	0/1:12,7:20:5.63:87,0,6	0/0:15,0:15:11.33:0,11,63	0/0:45,0:45:29.35:0,29,104	0/0:15,0:16:15.28:0,15,62	1/1:10,13:24:39.99:306,40,0	0/0:13,0:13:5.51:0,6,15	0/0:11,0:11:6.87:0,7,30	0/0:31,0:31:33.10:0,33,140	0/0:19,0:19:22.71:0,23,90	0/0:16,0:16:4.41:0,4,15	0/1:8,12:23:12.93:286,0,13	1/1:4,14:19:34.99:277,35,0	0/0:10,0:20:14.98:0,15,110	0/0:4,0:11:5.81:0,6,34	1/1:5,9:14:26.95:219,27,0	1/1:7,10:17:22.72:178,23,0	1/1:14,12:26:41.76:310,42,0	0/0:14,0:14:3.52:0,4,12	0/0:13,0:13:10.21:0,10,31	0/0:36,0:36:17.43:0,17,84	1/1:7,5:12:3.64:109,4,0	1/1:13,12:26:36.97:282,37,0	1/1:9,17:28:57.98:455,58,0	0/0:10,0:10:12.48:0,12,47
chr10	95752301	.	C	CACA	3606.57	PASS	AB=0.922;AC=14;AF=0.250;AN=56;BaseQRankSum=7.324;DP=532;FS=3.180;HRun=0;HaplotypeScore=161.1111;InbreedingCoeff=0.3647;MQ=69.48;MQ0=0;MQRankSum=-10.613;QD=17.42;ReadPosRankSum=5.199;VQSLOD=3.5361;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:19:14.47:0,14,140	0/0:9,0:9:20.53:0,21,198	0/0:18,0:18:36.41:0,36,701	0/0:19,0:17:39.43:0,39,543	0/0:19,0:19:47.78:0,48,514	0/1:13,4:19:88.74:200,0,89	0/1:38,0:38:53.02:690,0,53	0/0:19,0:19:48.05:0,48,502	0/0:26,0:26:66.05:0,66,672	1/1:11,1:12:9.87:269,10,0	0/1:10,0:10:19.70:89,0,20	0/1:24,5:32:63.71:681,0,64	1/1:14,2:17:14.64:521,15,0	0/1:14,0:14:14.30:323,0,14	0/0:23,0:23:66.13:0,66,771	0/0:17,0:17:42.10:0,42,465	0/0:21,0:21:32.97:0,33,415	0/0:13,0:13:6.02:0,6,79	0/0:12,0:12:31.83:0,32,346	0/0:15,0:15:30.03:0,30,306	0/0:27,0:27:66.13:0,66,723	1/1:17,0:17:17.59:277,18,0	1/1:12,0:12:4.20:167,4,0	0/1:35,1:36:99:390,0,132	0/0:12,0:12:27.02:0,27,265	0/0:24,0:24:58.31:0,58,560	0/0:24,0:24:68.92:0,69,709	0/0:8,0:8:18.03:0,18,180
chr10	95752302	.	C	CA	1200.47	PASS	AB=0.717;AC=16;AF=0.286;AN=56;BaseQRankSum=11.392;DP=522;FS=0.428;HRun=0;HaplotypeScore=144.3547;InbreedingCoeff=0.5113;MQ=69.08;MQ0=0;MQRankSum=-11.198;QD=5.38;ReadPosRankSum=3.026;VQSLOD=3.6172;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:9.37:9,0,18	0/0:9,0:9:17.63:0,18,107	0/0:17,0:17:44.78:0,45,500	0/0:19,0:17:30.49:0,30,394	0/0:18,0:18:38.58:0,39,300	0/1:12,7:19:18.17:102,0,18	1/1:18,20:38:22.09:253,22,0	0/0:20,0:20:36.57:0,37,182	0/0:26,0:26:53:0,53,349	1/1:7,5:12:27.36:164,27,0	0/1:3,8:11:12.35:12,0,23	0/1:18,14:32:7.27:194,0,7	0/1:8,10:18:0.42:163,0,0	1/1:6,8:14:28.65:173,29,0	0/0:23,0:23:61.78:0,62,438	0/0:17,0:17:38.20:0,38,240	0/0:22,0:22:16.73:0,17,201	0/0:12,0:12:3.75:0,4,41	0/0:12,0:12:35.10:0,35,218	0/0:14,0:14:26.87:0,27,161	0/0:27,0:27:58.64:0,59,374	1/1:8,8:16:17.46:142,17,0	1/1:3,9:12:8.47:51,8,0	0/1:16,18:34:33.04:121,0,33	0/0:10,0:10:17.71:0,18,116	0/0:22,0:22:47.01:0,47,300	0/0:24,0:24:64.51:0,65,392	0/0:7,0:7:11.83:0,12,41
chr10	95752303	.	C	CACA	5209.42	PASS	AB=0.815;AC=27;AF=0.482;AN=56;BaseQRankSum=4.922;DP=519;FS=3.185;HRun=0;HaplotypeScore=148.2602;InbreedingCoeff=0.6916;MQ=70.71;MQ0=0;MQRankSum=-9.819;QD=17.54;ReadPosRankSum=1.327;VQSLOD=4.3406;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,2:21:0.22:0,0,9	0/1:9,0:9:6.50:7,0,126	0/0:17,0:17:19.78:0,20,491	0/1:19,0:18:1.14:1,0,395	0/0:16,0:16:27.72:0,28,401	1/1:11,8:20:14.89:336,15,0	1/1:18,20:41:51.72:920,52,0	0/1:3,0:20:9.84:41,0,10	0/0:22,0:22:50.87:0,51,528	1/1:5,5:10:22.70:402,23,0	1/1:3,8:11:10.92:131,11,0	1/1:13,14:31:44.35:911,44,0	1/1:8,10:18:39.48:704,39,0	1/1:3,8:15:27.08:462,27,0	0/0:23,0:23:38.58:0,39,642	0/0:16,0:16:36.04:0,36,358	0/0:26,0:26:26.82:0,27,341	0/0:12,0:12:8.97:0,9,78	0/1:12,0:12:13.59:14,0,235	0/0:13,0:13:23.98:0,24,220	0/0:24,0:24:57.10:0,57,605	1/1:8,8:17:27.04:404,27,0	1/1:3,9:12:14.20:228,14,0	1/1:16,18:34:42.46:635,42,0	0/0:8,0:8:17.85:0,18,153	0/0:20,0:21:20.57:0,21,403	0/0:24,0:24:60.09:0,60,576	1/1:0,0:6:4.43:11,4,0
chr10	95752968	.	A	AC	13623.32	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-5.142;DP=607;FS=2.217;HRun=5;HaplotypeScore=71.3885;InbreedingCoeff=0.9770;MQ=79.54;MQ0=0;MQRankSum=-4.312;QD=31.68;ReadPosRankSum=4.887;VQSLOD=5.3479;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,43:45:99:1302,99,0	1/1:0,5:5:12.04:158,12,0	0/0:31,0:26:59.32:0,59,595	0/0:37,0:28:40.64:0,41,614	1/1:1,14:15:39.13:512,39,0	1/1:0,17:17:39.13:513,39,0	1/1:2,30:32:72.23:947,72,0	0/0:28,0:28:66.12:0,66,688	1/1:1,29:30:78.25:1026,78,0	1/1:2,10:12:33.04:386,33,0	1/1:1,4:5:13.28:161,13,0	1/1:0,12:12:33.11:434,33,0	1/1:2,18:20:51.14:653,51,0	1/1:2,22:24:48.16:631,48,0	1/1:2,19:21:45.15:592,45,0	1/1:2,20:22:60.20:789,60,0	0/0:29,0:29:81.19:0,81,863	0/0:36,0:36:99:0,99,1039	1/1:1,10:11:27.09:355,27,0	1/1:0,20:20:54.18:710,54,0	1/1:2,34:36:81.26:1065,81,0	1/1:2,21:23:51.17:670,51,0	1/1:2,2:4:9.02:105,9,0	1/1:3,16:19:45.15:592,45,0	1/1:3,10:13:30.10:395,30,0	1/1:2,20:22:63.17:797,63,0	1/1:0,22:22:63.20:829,63,0	0/0:15,0:15:36.09:0,36,386
chr10	95753122	.	C	CACAG	10060.19	PASS	AB=0.628;AC=25;AF=0.446;AN=56;BaseQRankSum=-12.100;DP=694;FS=16.074;HRun=0;HaplotypeScore=152.3734;InbreedingCoeff=0.7222;MQ=64.89;MQ0=3;MQRankSum=1.076;QD=27.79;ReadPosRankSum=-0.975;VQSLOD=3.6542;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,1:46:44.18:737,44,0	1/1:6,8:14:15.05:360,15,0	0/0:30,0:25:26.75:0,27,328	0/0:26,0:23:20.95:0,21,298	1/1:8,15:24:39.13:932,39,0	0/0:8,0:17:35.01:0,35,314	0/0:17,0:35:53.03:0,53,476	1/1:40,0:38:24.39:275,24,0	1/1:11,16:28:0.23:1030,0,0	0/0:7,0:20:43.79:0,44,406	0/0:7,0:17:32.29:0,32,306	0/0:9,0:21:38.88:0,39,374	0/0:8,0:15:24.03:0,24,223	0/0:7,0:15:23.29:0,23,222	0/1:8,14:24:8.77:811,0,9	0/1:12,17:30:11.78:755,0,12	0/0:26,0:26:51.15:0,51,779	0/0:37,0:37:90.26:0,90,1401	1/1:10,7:17:21.03:382,21,0	1/1:5,8:13:24.08:568,24,0	1/1:32,26:57:3.54:2081,4,0	0/0:10,0:18:30.51:0,31,292	0/0:8,0:23:42.05:0,42,390	0/0:13,0:31:57.94:0,58,555	1/1:2,8:10:21.07:503,21,0	0/1:13,14:25:42.51:837,0,43	1/1:10,11:22:17.11:632,17,0	1/1:4,0:8:9.03:157,9,0
chr10	95753152	.	C	CAG	1896.97	PASS	AB=0.978;AC=12;AF=0.214;AN=56;BaseQRankSum=2.708;DP=689;FS=10.696;HRun=0;HaplotypeScore=164.2503;InbreedingCoeff=-0.2857;MQ=70.11;MQ0=4;MQRankSum=0.867;QD=6.14;ReadPosRankSum=5.315;VQSLOD=2.4712;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:39:99:264,0,291	0/1:9,0:9:64.15:64,0,70	0/0:31,0:24:61.86:0,62,845	0/0:25,0:23:56.65:0,57,789	0/1:21,0:21:99:167,0,132	0/0:18,0:18:47.98:0,48,462	0/0:32,0:32:77.94:0,78,795	0/1:18,10:26:99:285,0,488	0/1:27,0:27:99:186,0,276	0/0:21,0:21:58.74:0,59,598	0/0:19,0:19:54.03:0,54,597	0/0:18,0:18:50.84:0,51,521	0/0:18,0:18:48.05:0,48,568	0/0:18,0:18:48.05:0,48,553	0/1:22,0:22:99:129,0,350	0/1:29,0:29:99:124,0,392	0/0:28,0:28:75.23:0,75,1117	0/0:45,0:45:99:0,135,1978	0/0:25,0:24:1.13:0,1,729	0/1:13,0:13:97.29:97,0,101	0/1:55,0:54:99:399,0,677	0/0:21,0:21:51.51:0,52,584	0/0:20,0:20:50.97:0,51,467	0/0:30,0:30:75.87:0,76,778	0/1:15,0:15:77.10:77,0,235	0/1:23,0:21:99:148,0,296	0/1:28,0:28:99:106,0,427	0/0:11,0:11:21.07:0,21,319
chr10	95753193	.	GA	G	1685.11	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.145;DP=653;FS=20.416;HRun=1;HaplotypeScore=125.7842;InbreedingCoeff=0.9903;MQ=88.13;MQ0=0;MQRankSum=-2.436;QD=7.99;ReadPosRankSum=2.938;VQSLOD=-0.2635;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:40:90.15:0,90,1349	0/0:9,0:9:27.09:0,27,431	0/0:28,0:28:81.25:0,81,1219	0/0:23,0:23:63.57:0,64,889	0/0:10,0:10:27.09:0,27,431	1/1:17,0:17:12.52:156,13,0	1/1:24,0:24:22.15:133,22,0	0/0:24,0:24:66.22:0,66,1029	0/0:17,0:17:48.14:0,48,721	1/1:24,0:24:22.71:159,23,0	1/1:10,1:11:27.63:178,28,0	1/1:21,0:21:16.25:142,16,0	1/1:21,1:22:28.29:196,28,0	1/1:22,1:23:55.96:224,56,0	0/0:25,0:25:75.23:0,75,1148	0/0:28,0:28:72.22:0,72,1104	0/0:29,0:29:80.91:0,81,1291	0/0:42,0:42:99:0,126,1928	0/0:31,0:30:87.23:0,87,1358	0/0:20,0:20:54.14:0,54,793	0/0:38,0:38:99:0,111,1770	1/1:24,0:24:59.40:289,59,0	1/1:16,2:18:15.10:202,15,0	1/1:27,0:27:47.54:227,48,0	0/0:18,0:18:54.18:0,54,863	0/0:20,0:20:55.06:0,55,880	0/0:25,0:24:69.24:0,69,1102	0/0:15,0:15:45.15:0,45,716
chr10	95753197	.	TG	T	5132.80	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.167;DP=646;FS=12.736;HRun=7;HaplotypeScore=106.4570;InbreedingCoeff=0.9996;MQ=87.33;MQ0=0;MQRankSum=-2.496;QD=24.92;ReadPosRankSum=2.518;VQSLOD=3.9353;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:75.07:0,75,901	0/0:9,0:9:27.09:0,27,340	0/0:28,0:28:75.23:0,75,925	0/0:21,0:21:49.22:0,49,546	0/0:12,0:12:33.09:0,33,400	1/1:2,14:16:33.07:336,33,0	1/1:1,23:24:57.13:581,57,0	0/0:25,0:25:63.19:0,63,771	0/0:20,0:20:54.17:0,54,678	1/1:3,21:24:63.09:624,63,0	1/1:2,10:12:30.03:290,30,0	1/1:2,17:19:39.05:386,39,0	1/1:2,21:23:57.12:580,57,0	1/1:1,22:23:66.02:639,66,0	0/0:24,0:24:69.20:0,69,842	0/0:28,0:28:63.19:0,63,780	0/0:28,0:28:74.84:0,75,906	0/0:41,0:41:99:0,114,1434	0/0:32,0:31:84.24:0,84,1035	0/0:18,0:18:51.16:0,51,637	0/0:38,0:38:96.31:0,96,1207	1/1:2,23:25:69.15:699,69,0	1/1:5,11:16:36.04:355,36,0	1/1:2,22:24:63.06:642,63,0	0/0:17,0:17:48.11:0,48,583	0/0:20,1:21:29.56:0,30,661	0/0:26,0:25:72.23:0,72,904	0/0:15,0:15:42.13:0,42,528
chr10	95754259	.	C	CCAAA	19558.98	PASS	AB=0.621;AC=44;AF=0.786;AN=56;BaseQRankSum=-12.014;DP=686;FS=0.447;HRun=0;HaplotypeScore=93.7211;InbreedingCoeff=0.7966;MQ=72.33;MQ0=0;MQRankSum=-0.616;QD=37.40;ReadPosRankSum=-1.260;VQSLOD=4.5654;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:54.51:0,55,1303	1/1:3,6:10:21.07:486,21,0	0/0:24,0:22:15.04:0,15,216	0/0:28,0:28:20.98:0,21,307	1/1:4,21:25:57.13:1213,57,0	0/1:8,17:25:6.03:897,0,6	1/1:8,17:26:39.13:939,39,0	1/1:29,12:46:55.27:883,55,0	1/1:6,8:14:21.07:504,21,0	1/1:6,17:23:54.19:1288,54,0	1/1:7,6:13:21.07:469,21,0	1/1:8,15:25:39.13:906,39,0	1/1:5,18:25:39.13:939,39,0	1/1:2,21:23:57.20:1372,57,0	1/1:5,14:21:39.13:938,39,0	1/1:6,18:24:45.15:1083,45,0	0/0:36,0:35:69.21:0,69,1073	0/0:28,0:28:60.16:0,60,932	1/1:15,11:26:36.04:734,36,0	1/1:7,11:19:33.04:659,33,0	1/1:9,11:23:24.08:578,24,0	1/1:7,12:19:33.03:720,33,0	1/1:6,16:22:34.05:760,34,0	0/1:10,10:22:15.05:686,0,15	1/1:7,6:13:12.04:289,12,0	1/1:6,23:30:72.16:1558,72,0	1/1:12,17:31:36.12:864,36,0	1/1:6,11:18:33.11:794,33,0
chr10	95754947	.	TGGCCTG	T	8996.39	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=16.339;DP=664;FS=8.030;HRun=0;HaplotypeScore=166.0210;InbreedingCoeff=0.9940;MQ=81.93;MQ0=0;MQRankSum=-16.681;QD=43.04;ReadPosRankSum=1.781;VQSLOD=4.3330;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,166,5775	0/0:16,0:16:42.14:0,42,1486	0/0:21,0:21:51.17:0,51,1516	0/0:22,0:22:53.92:0,54,1539	0/0:30,0:30:75.21:0,75,2439	1/1:1,20:21:45.15:1063,45,0	1/1:4,21:25:54.19:1271,54,0	0/0:19,0:19:48.16:0,48,1633	0/0:26,0:26:75.26:0,75,2537	1/1:2,16:18:45.15:1013,45,0	1/1:5,8:13:14.94:337,15,0	1/1:1,17:18:42.14:992,42,0	1/1:2,12:14:30.10:707,30,0	1/1:1,25:26:57.20:1346,57,0	0/0:27,0:27:78.24:0,78,2524	0/0:26,0:26:78.25:0,78,2632	0/0:39,0:39:99:0,117,3978	0/0:15,0:15:42.14:0,42,1491	0/0:16,0:16:42.14:0,42,1314	0/0:27,0:27:78.25:0,78,2688	0/0:46,0:46:99:0,132,4602	1/1:1,21:21:42.14:992,42,0	1/1:2,26:28:39.28:921,39,0	1/1:5,19:24:15.18:355,15,0	0/0:19,0:19:54.19:0,54,1803	0/0:26,0:26:78.26:0,78,2647	0/0:19,0:19:57.20:0,57,1962	0/0:6,0:6:18.04:0,18,551
chr10	95755308	.	T	TTCTC	4176.72	PASS	AB=0.992;AC=43;AF=0.796;AN=54;BaseQRankSum=-2.601;DP=571;FS=17.751;HRun=0;HaplotypeScore=147.5836;InbreedingCoeff=0.0857;MQ=64.74;MQ0=6;MQRankSum=0.388;QD=8.19;ReadPosRankSum=1.736;VQSLOD=2.0411;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:22:12.03:107,12,0	0/1:14,0:14:29.29:29,0,36	0/0:18,0:15:6.01:0,6,67	0/0:27,0:18:4.06:0,4,74	1/1:21,0:21:2.94:18,3,0	1/1:15,0:16:12.26:82,12,0	0/1:24,0:24:72.21:72,0,120	1/1:42,0:41:17.35:107,17,0	1/1:18,3:21:29.39:376,29,0	1/1:25,0:24:15.36:192,15,0	./.	0/1:16,0:17:15.10:102,0,15	1/1:21,0:21:23.67:207,24,0	0/1:25,0:25:7.20:72,0,7	1/1:18,1:19:21.02:242,21,0	1/1:12,4:17:23.85:375,24,0	0/1:14,0:13:47.31:100,0,47	0/1:17,0:17:0.34:151,0,0	1/1:17,0:17:18.02:204,18,0	1/1:17,0:17:11.87:88,12,0	1/1:22,0:22:26.99:247,27,0	1/1:15,0:14:5.99:50,6,0	1/1:13,0:13:8.47:60,8,0	0/1:21,0:21:10.30:76,0,10	1/1:14,0:14:1.98:62,2,0	1/1:24,0:23:38.94:508,39,0	1/1:15,1:20:12.04:224,12,0	1/1:23,1:25:42.26:425,42,0
chr10	95755340	.	CTA	C	5221.18	PASS	AB=0.964;AC=45;AF=0.804;AN=56;BaseQRankSum=-5.121;DP=520;FS=14.739;HRun=0;HaplotypeScore=115.2882;InbreedingCoeff=-0.0310;MQ=53.79;MQ0=10;MQRankSum=5.896;QD=10.30;ReadPosRankSum=-5.234;VQSLOD=2.3966;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,1:22:13.63:108,14,0	0/1:9,0:9:29.62:73,0,30	0/0:12,0:8:6.72:0,7,84	0/1:24,0:14:3.32:3,0,94	1/1:22,0:21:20.91:165,21,0	1/1:14,0:14:10.35:157,10,0	0/1:18,1:19:99:128,0,100	0/1:31,5:34:21.90:22,0,338	1/1:27,1:27:40.17:399,40,0	0/1:15,0:13:10.25:122,0,10	1/1:11,0:11:11.98:98,12,0	1/1:19,2:21:36.67:469,37,0	1/1:11,5:16:35.60:365,36,0	1/1:0,17:17:11.83:166,12,0	1/1:17,5:21:7.83:333,8,0	1/1:18,0:18:19.51:259,20,0	0/1:16,1:17:40.31:134,0,40	0/1:19,1:19:19.83:209,0,20	1/1:15,1:15:17.03:291,17,0	1/1:15,0:12:20.90:177,21,0	1/1:17,0:17:30.39:272,30,0	1/1:12,0:12:20.96:171,21,0	1/1:10,3:13:9.45:97,9,0	1/1:0,25:25:9.03:127,9,0	1/1:12,0:12:2.37:46,2,0	1/1:23,4:26:19.12:512,19,0	0/1:19,0:17:13.51:82,0,14	0/1:19,1:20:98.43:238,0,98
chr10	95755344	.	C	CTA	33.07	PASS	AB=0.948;AC=5;AF=0.089;AN=56;BaseQRankSum=5.034;DP=537;FS=2.527;HRun=0;HaplotypeScore=142.1177;InbreedingCoeff=-0.1165;MQ=59.07;MQ0=10;MQRankSum=0.754;QD=0.34;ReadPosRankSum=2.889;VQSLOD=2.8175;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,8:23:88.59:95,0,89	0/0:8,0:8:12.01:0,12,131	0/0:20,0:12:10.08:0,10,148	0/1:28,0:18:14.30:14,0,212	0/0:19,0:18:14.97:0,15,123	0/0:13,0:13:13.68:0,14,154	0/0:20,0:20:45.71:0,46,482	0/0:36,0:34:97.83:0,98,1341	0/0:28,0:27:18.10:0,18,291	0/0:15,0:13:26.91:0,27,208	0/0:13,0:13:11.97:0,12,96	0/0:23,0:23:37.35:0,37,462	0/0:18,0:18:32.62:0,33,272	0/0:19,0:19:12:0,12,106	0/0:24,0:23:8.45:0,8,313	0/0:19,0:19:0.69:0,1,199	0/0:18,0:18:30.90:0,31,303	0/0:19,0:19:29.52:0,30,374	0/0:16,0:15:24.21:0,24,300	0/0:14,0:10:18.04:0,18,154	0/0:14,0:14:8.70:0,9,89	0/0:11,0:11:17.98:0,18,148	0/1:13,0:13:5.21:5,0,58	0/0:26,0:26:12:0,12,110	0/1:13,0:13:1.71:2,0,85	0/0:28,0:27:48.10:0,48,528	0/0:19,0:17:2.30:0,2,104	0/1:18,0:18:18.45:18,0,268
chr10	95755637	.	TTTG	T	558.43	PASS	AB=0.954;AC=28;AF=0.538;AN=52;BaseQRankSum=10.169;DP=344;FS=3.459;HRun=0;HaplotypeScore=61.6251;InbreedingCoeff=0.3554;MQ=32.42;MQ0=76;MQRankSum=-0.275;QD=3.30;ReadPosRankSum=-1.296;VQSLOD=0.9331;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:2:5.78:30,6,0	0/0:9,0:8:18.77:0,19,117	./.	./.	0/1:17,3:17:19.82:20,0,225	1/1:11,0:8:22.93:119,23,0	1/1:7,0:2:5.75:30,6,0	0/1:23,1:23:14.01:14,0,335	0/1:7,0:5:9.11:9,0,45	1/1:7,0:7:16.66:84,17,0	1/1:4,0:3:2.88:15,3,0	1/1:7,0:6:17.27:91,17,0	1/1:3,0:2:5.75:29,6,0	1/1:4,0:3:8.65:45,9,0	0/1:8,0:6:11.79:12,0,57	0/1:19,1:19:6.88:7,0,230	0/0:22,0:16:32.10:0,32,290	0/0:18,0:12:26.31:0,26,233	0/0:24,0:14:21.20:0,21,186	0/0:17,0:15:3.69:0,4,159	0/0:11,0:6:4.37:0,4,22	1/1:6,0:5:4.25:27,4,0	1/1:5,0:5:14.40:76,14,0	1/1:11,0:3:5.67:28,6,0	0/0:6,0:5:1.02:0,1,42	0/0:11,0:11:10.69:0,11,121	0/1:16,1:14:99:99,0,108	0/0:37,0:32:37.21:0,37,398
chr10	95755639	.	TGGTTC	T	2278.81	PASS	AB=0.981;AC=26;AF=0.500;AN=52;BaseQRankSum=9.002;DP=328;FS=0.548;HRun=0;HaplotypeScore=63.6830;InbreedingCoeff=0.5239;MQ=32.69;MQ0=72;MQRankSum=-0.383;QD=16.05;ReadPosRankSum=-0.310;VQSLOD=2.6456;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,2:2:6.02:107,6,0	0/0:8,0:7:17.70:0,18,247	./.	./.	0/1:21,0:18:17.75:18,0,655	1/1:3,8:8:24.08:440,24,0	1/1:5,2:2:6.02:109,6,0	0/1:22,0:24:60.74:61,0,831	0/0:5,0:4:7.27:0,7,115	1/1:0,7:7:18.95:332,19,0	1/1:1,2:2:3.01:55,3,0	1/1:1,6:6:18.06:323,18,0	1/1:1,2:2:6.02:110,6,0	1/1:1,3:3:9.03:162,9,0	0/1:8,0:6:44.64:45,0,245	0/0:20,0:19:16.40:0,16,713	0/0:21,0:15:13.31:0,13,463	0/0:18,0:12:15.88:0,16,398	0/0:19,0:11:26.06:0,26,480	0/0:17,0:15:28.42:0,28,544	0/0:11,0:6:1.01:0,1,51	1/1:2,4:5:7.27:112,7,0	1/1:0,5:5:15.05:271,15,0	1/1:8,3:3:9.03:146,9,0	0/0:8,0:6:13.22:0,13,217	0/0:8,0:8:14.37:0,14,293	0/1:17,0:14:99:177,0,248	0/0:36,0:32:14.57:0,15,546
chr10	95755662	.	G	GA	3737.25	PASS	AC=22;AF=0.423;AN=52;BaseQRankSum=10.894;DP=315;FS=13.555;HRun=1;HaplotypeScore=52.7968;InbreedingCoeff=0.9350;MQ=35.61;MQ0=70;MQRankSum=-0.308;QD=28.75;ReadPosRankSum=-1.549;VQSLOD=1.7947;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,8:9:14.79:190,15,0	0/0:4,0:3:9.03:0,9,116	./.	./.	0/0:22,0:18:42.14:0,42,542	1/1:2,14:14:39.13:575,39,0	1/1:6,7:8:6.02:89,6,0	0/0:13,0:12:33.09:0,33,411	0/0:4,0:3:8.97:0,9,81	1/1:6,9:15:38.98:484,39,0	1/1:1,8:8:21.07:313,21,0	1/1:1,13:13:39.13:561,39,0	1/1:1,3:3:9.03:128,9,0	1/1:1,6:6:18.06:269,18,0	0/0:11,0:8:21.05:0,21,257	0/0:13,0:12:33.11:0,33,426	0/0:19,0:13:29.90:0,30,328	0/0:16,0:10:27.02:0,27,315	0/0:22,0:14:36.12:0,36,460	0/0:13,0:11:30.10:0,30,386	0/0:12,0:6:15.04:0,15,180	1/1:1,13:13:33.11:486,33,0	1/1:1,8:8:21.07:310,21,0	1/1:8,8:8:24.01:331,24,0	0/0:5,0:4:12.04:0,12,155	0/0:8,0:7:21.06:0,21,260	0/0:12,0:9:27.03:0,27,311	0/0:11,0:6:9.03:0,9,116
chr10	95755872	.	CTA	C	7344.78	PASS	AB=0.858;AC=24;AF=0.429;AN=56;BaseQRankSum=11.705;DP=478;FS=6.976;HRun=0;HaplotypeScore=60.7911;InbreedingCoeff=0.8394;MQ=58.79;MQ0=3;MQRankSum=-4.955;QD=24.73;ReadPosRankSum=3.261;VQSLOD=5.1715;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:23:47.81:580,48,0	0/0:7,0:7:18.06:0,18,304	0/0:14,0:13:23.93:0,24,327	0/0:8,0:4:8.23:0,8,77	0/0:15,0:15:42.12:0,42,690	1/1:2,33:35:68.85:905,69,0	1/1:0,16:15:20.69:275,21,0	0/0:26,0:26:72.24:0,72,1207	0/0:7,0:7:18.06:0,18,308	1/1:3,34:31:63.18:808,63,0	1/1:3,33:36:75.24:984,75,0	1/1:2,23:25:66.21:866,66,0	1/1:1,14:15:30.10:394,30,0	1/1:2,16:18:42.14:551,42,0	0/0:17,0:17:45.09:0,45,708	0/0:6,0:6:18.05:0,18,268	0/1:6,2:8:54.38:54,0,284	0/0:21,0:21:57.15:0,57,938	0/0:10,0:10:24.08:0,24,412	0/0:8,0:8:24.08:0,24,411	0/0:15,0:15:42.11:0,42,665	1/1:3,23:25:57.18:742,57,0	1/1:5,19:22:39.13:507,39,0	1/1:4,18:22:51.17:670,51,0	0/0:4,0:4:9.03:0,9,154	0/1:10,1:11:9.32:9,0,433	0/0:10,0:10:27.09:0,27,454	0/0:13,0:13:36.12:0,36,615
chr10	95756165	.	TACAC	T	853.31	PASS	AC=16;AF=0.364;AN=44;BaseQRankSum=-0.366;DP=129;FS=7.416;HRun=0;HaplotypeScore=27.7896;InbreedingCoeff=0.7329;MQ=96.19;MQ0=2;MQRankSum=-0.608;QD=35.55;ReadPosRankSum=0.117;VQSLOD=2.0816;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:18.06:287,18,0	./.	0/0:15,0:11:32.58:0,33,442	0/0:9,0:8:0.97:0,1,103	0/0:8,0:7:21.07:0,21,333	1/1:2,0:2:6.02:99,6,0	1/1:2,0:2:6:73,6,0	0/0:10,0:10:29.69:0,30,480	0/0:3,0:3:9.03:0,9,142	1/1:3,0:3:9.03:165,9,0	1/1:1,0:1:3.01:50,3,0	./.	./.	1/1:3,0:3:9.03:147,9,0	0/0:3,0:3:9.03:0,9,144	0/0:4,0:4:12.04:0,12,196	0/0:18,0:17:47.61:0,48,589	0/0:6,0:6:18.02:0,18,243	0/0:3,0:3:9.03:0,9,137	0/0:2,0:2:6.02:0,6,96	0/0:6,0:6:15.05:0,15,240	./.	1/1:3,0:3:3.48:50,3,0	1/1:3,0:3:9.03:142,9,0	./.	0/0:5,0:5:15.05:0,15,260	0/0:2,0:2:6.02:0,6,89	./.
chr10	95756645	.	T	TA	2235.81	PASS	AB=0.834;AC=24;AF=0.429;AN=56;BaseQRankSum=9.294;DP=500;FS=10.137;HRun=13;HaplotypeScore=90.6013;InbreedingCoeff=0.8359;MQ=73.93;MQ0=0;MQRankSum=-1.537;QD=9.39;ReadPosRankSum=4.515;VQSLOD=2.2393;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:41:99:564,104,0	0/1:6,1:7:7.02:7,0,101	0/0:17,0:16:9.71:0,10,73	0/0:13,0:10:14.67:0,15,97	0/0:12,0:12:16.81:0,17,117	1/1:17,0:17:37.42:198,37,0	1/1:24,0:24:45.93:244,46,0	0/0:24,0:24:38.48:0,38,262	0/0:9,0:9:11.76:0,12,80	1/1:20,0:20:55.57:280,56,0	1/1:16,0:16:29.48:177,29,0	1/1:12,0:12:22.96:118,23,0	1/1:14,0:14:20.11:104,20,0	1/1:18,0:18:40.33:211,40,0	0/0:8,0:8:7.68:0,8,60	0/0:9,0:9:17.80:0,18,122	0/0:26,0:27:37.25:0,37,294	0/0:28,0:30:52.89:0,53,351	0/1:17,6:23:69.51:70,0,159	0/0:18,0:18:26.64:0,27,181	0/0:19,0:20:25.66:0,26,169	1/1:15,0:15:23.08:127,23,0	1/1:14,0:14:28.89:157,29,0	1/1:17,0:17:34.92:200,35,0	0/0:15,0:15:33.86:0,34,227	0/0:25,0:25:28.39:0,28,186	0/0:20,0:21:42.65:0,43,289	0/0:13,0:13:17.60:0,18,109
chr10	95756652	.	A	AC	6068.97	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-7.003;DP=489;FS=18.384;HRun=0;HaplotypeScore=66.1339;InbreedingCoeff=0.9961;MQ=68.83;MQ0=0;MQRankSum=-1.807;QD=30.19;ReadPosRankSum=9.586;VQSLOD=2.7303;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,43:43:99:1410,111,0	0/0:7,0:7:17.66:0,18,250	0/0:19,0:16:32.10:0,32,318	0/0:14,0:10:24.57:0,25,269	0/0:14,0:14:42.05:0,42,456	1/1:0,14:14:39.13:503,39,0	1/1:1,21:22:48.15:619,48,0	0/0:26,0:26:63.12:0,63,754	0/0:10,0:10:30.05:0,30,328	1/1:0,20:20:60.19:769,60,0	1/1:2,12:14:36.07:400,36,0	1/1:1,12:13:29.60:337,30,0	1/1:1,14:15:23.11:278,23,0	1/1:0,17:17:45.08:561,45,0	0/0:9,0:9:26.98:0,27,273	0/0:8,0:8:24.03:0,24,296	0/0:27,0:27:79.61:0,80,873	0/0:27,0:27:78.08:0,78,921	0/0:21,0:21:46.93:0,47,600	0/0:14,0:14:39.08:0,39,474	0/0:19,0:19:54.02:0,54,583	1/1:1,11:12:35.71:373,36,0	1/1:1,13:14:17.77:370,18,0	1/1:0,17:17:36.11:450,36,0	0/0:15,0:15:45.13:0,45,574	0/0:22,0:22:63.07:0,63,692	0/0:22,0:22:62.94:0,63,712	0/0:14,0:14:41.89:0,42,421
chr10	95756675	.	C	CGT	3411.84	PASS	AB=0.816;AC=39;AF=0.750;AN=52;BaseQRankSum=3.516;DP=554;FS=0.000;HRun=0;HaplotypeScore=129.9962;InbreedingCoeff=-0.0761;MQ=57.30;MQ0=11;MQRankSum=1.113;QD=6.82;ReadPosRankSum=-2.781;VQSLOD=2.3714;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:50,0:50:39.55:372,40,0	1/1:4,4:8:12.04:179,12,0	./.	0/1:27,0:14:0:0,0,0	1/1:9,4:15:9.03:134,9,0	1/1:12,0:14:9:81,9,0	1/1:25,0:25:18.02:195,18,0	1/1:25,0:25:6.49:68,6,0	0/1:7,3:11:53.43:78,0,53	1/1:26,0:25:36.88:351,37,0	1/1:12,0:14:9.01:95,9,0	1/1:9,0:10:16.26:166,16,0	1/1:15,0:16:17.51:174,18,0	1/1:25,0:24:18.21:179,18,0	0/1:7,7:18:11.68:229,0,12	./.	0/1:25,1:27:8.99:9,0,297	0/0:24,0:28:35.71:0,36,334	0/1:25,1:26:17.23:142,0,17	0/1:8,3:12:53.43:77,0,53	0/1:21,5:25:26.71:39,0,27	1/1:18,0:18:15.02:161,15,0	1/1:18,0:19:15.04:197,15,0	1/1:24,1:24:14.98:124,15,0	0/1:7,1:8:26.65:39,0,27	0/1:12,3:14:35.72:97,0,36	0/1:17,6:23:17.67:164,0,18	0/1:3,0:10:20.71:64,0,21
chr10	95757095	.	A	ACACGC	11412.23	PASS	AB=0.964;AC=21;AF=0.375;AN=56;BaseQRankSum=-5.503;DP=630;FS=0.771;HRun=0;HaplotypeScore=127.7680;InbreedingCoeff=0.8835;MQ=87.40;MQ0=0;MQRankSum=-10.530;QD=46.96;ReadPosRankSum=1.238;VQSLOD=4.6817;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,111,2254	0/0:8,0:8:24.07:0,24,456	0/0:19,0:19:45.14:0,45,841	0/0:31,0:31:69.13:0,69,1320	0/0:17,0:17:48.12:0,48,943	1/1:3,19:22:45.15:1336,45,0	1/1:6,24:32:60.12:1656,60,0	0/0:25,0:25:57.20:0,57,1154	0/0:25,0:25:72.21:0,72,1436	1/1:4,15:20:45.10:1205,45,0	1/1:3,8:11:8.59:263,9,0	1/1:4,25:30:57.20:1689,57,0	1/1:5,14:19:45.15:1359,45,0	1/1:2,22:24:45.11:1367,45,0	0/0:13,0:13:30.06:0,30,574	0/0:15,0:15:39.13:0,39,800	0/0:32,0:32:87.28:0,87,1731	0/0:36,0:36:99:0,102,2035	0/0:19,0:19:45.14:0,45,877	0/0:13,0:13:33.11:0,33,666	0/0:48,0:48:99:0,117,2377	1/1:6,12:18:24.08:719,24,0	1/1:6,5:12:6.02:175,6,0	1/1:4,23:28:54.98:1619,55,0	0/0:22,0:22:45.11:0,45,835	0/1:26,1:27:22.04:22,0,1187	0/0:14,0:13:39.13:0,39,799	0/0:4,0:4:6.02:0,6,123
chr10	95757415	.	T	TC	7291.55	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=3.013;DP=612;FS=8.354;HRun=5;HaplotypeScore=72.3898;InbreedingCoeff=0.9995;MQ=90.48;MQ0=0;MQRankSum=-2.035;QD=34.23;ReadPosRankSum=2.426;VQSLOD=5.0236;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:93.22:0,93,999	0/0:14,0:14:42.11:0,42,450	0/0:25,0:25:57.07:0,57,582	0/0:24,0:24:58.64:0,59,565	0/0:20,0:20:54.14:0,54,580	1/1:4,21:25:60.19:784,60,0	1/1:2,23:25:66.21:869,66,0	0/0:15,0:15:39.09:0,39,413	0/0:21,0:21:63.14:0,63,669	1/1:2,21:23:66.19:840,66,0	1/1:2,15:17:42.14:551,42,0	1/1:4,26:30:63.04:828,63,0	1/1:0,17:17:51.17:671,51,0	1/1:1,22:23:69.22:894,69,0	0/0:18,0:18:48.12:0,48,516	0/0:18,0:18:54.14:0,54,580	0/0:33,0:33:96.23:0,96,1023	0/0:29,0:29:84.21:0,84,903	0/0:26,0:26:72.18:0,72,773	0/0:16,0:16:48.12:0,48,516	0/0:27,0:27:72.13:0,72,754	1/1:0,9:9:24.08:315,24,0	1/1:0,18:18:45.05:591,45,0	1/1:1,25:26:72.23:947,72,0	0/0:20,0:20:60.15:0,60,645	0/0:21,0:21:60.15:0,60,645	0/0:21,0:21:60.15:0,60,644	0/0:11,0:11:27.07:0,27,290
chr10	95757892	.	C	CT	9874.10	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-7.880;DP=723;FS=8.159;HRun=0;HaplotypeScore=70.3024;InbreedingCoeff=0.9988;MQ=88.46;MQ0=0;MQRankSum=-3.415;QD=39.18;ReadPosRankSum=4.362;VQSLOD=5.2163;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,123,1675	0/0:13,0:13:36.12:0,36,496	0/0:28,0:28:78.09:0,78,987	0/0:23,0:23:68.58:0,69,825	0/0:20,0:19:57.09:0,57,734	1/1:0,10:10:21.07:335,21,0	1/1:1,35:36:81.28:1293,81,0	0/0:31,0:31:87.28:0,87,1197	0/0:14,0:14:42.08:0,42,544	1/1:0,26:26:78.25:1218,78,0	1/1:0,16:16:45.15:719,45,0	1/1:0,22:22:54.18:862,54,0	1/1:0,23:23:54.18:862,54,0	1/1:0,36:36:99:1581,99,0	0/0:30,0:30:87.27:0,87,1180	0/0:21,0:21:63.21:0,63,878	0/0:31,0:31:87.23:0,87,1173	0/0:28,0:28:81.27:0,81,1130	0/0:25,0:25:66.14:0,66,861	0/0:19,0:19:54.18:0,54,753	0/0:42,0:42:99:0,126,1685	1/1:0,24:24:48.16:752,48,0	1/1:0,25:25:66.23:1054,66,0	1/1:0,34:34:75.26:1198,75,0	0/0:17,0:17:45.15:0,45,628	0/0:24,1:25:21.21:0,21,848	0/0:36,0:36:99:0,105,1357	0/0:21,0:21:54.18:0,54,752
chr10	95758919	.	AT	A	1774.85	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=9.394;DP=464;FS=30.437;HRun=9;HaplotypeScore=63.1323;InbreedingCoeff=0.9814;MQ=69.71;MQ0=7;MQRankSum=-4.920;QD=16.90;ReadPosRankSum=0.177;VQSLOD=2.0018;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,1:50:99:0,120,1581	0/0:5,0:5:12.04:0,12,138	0/0:25,0:12:14.53:0,15,230	0/0:27,0:15:30.06:0,30,322	0/0:11,0:11:27.08:0,27,311	1/1:2,9:11:23.96:211,24,0	1/1:3,9:11:14.99:137,15,0	0/0:28,0:28:81.19:0,81,910	0/0:18,0:18:48.13:0,48,546	1/1:1,8:9:24.01:220,24,0	1/1:2,7:9:21.01:192,21,0	1/1:3,10:13:30:274,30,0	1/1:1,7:8:21.01:192,21,0	1/1:4,7:11:21:192,21,0	0/0:20,0:20:54.16:0,54,623	0/0:11,0:11:30.09:0,30,346	0/0:39,0:38:99:0,102,1163	0/0:24,0:24:66.16:0,66,738	0/0:20,0:19:48.14:0,48,553	0/0:9,0:9:24.07:0,24,277	0/0:20,0:20:54.14:0,54,612	1/1:2,9:11:20.99:192,21,0	1/1:0,8:8:18:165,18,0	1/1:3,10:13:24.01:219,24,0	0/0:7,0:7:18.05:0,18,208	0/0:23,1:24:29.70:0,30,595	0/0:14,0:14:33.10:0,33,380	0/0:6,0:6:15.04:0,15,173
chr10	95758933	.	CT	C	1812.26	PASS	AB=0.859;AC=21;AF=0.375;AN=56;BaseQRankSum=12.046;DP=467;FS=15.941;HRun=9;HaplotypeScore=68.5579;InbreedingCoeff=0.7734;MQ=56.00;MQ0=19;MQRankSum=-9.226;QD=10.79;ReadPosRankSum=-2.320;VQSLOD=0.6247;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,114,1220	0/0:4,0:4:9.01:0,9,94	0/1:31,1:7:22.26:22,0,44	0/1:26,0:9:12.12:12,0,115	0/0:11,0:11:27.04:0,27,289	1/1:4,10:12:31.99:267,32,0	1/1:5,7:11:20.99:188,21,0	0/0:32,0:31:81.03:0,81,856	0/0:23,0:24:43.87:0,44,498	1/1:2,6:8:24:215,24,0	1/1:2,7:9:18.57:149,19,0	0/1:5,9:13:4.61:213,0,5	1/1:4,4:8:15.01:137,15,0	1/1:5,6:11:20.98:184,21,0	0/0:20,0:20:39.10:0,39,440	0/0:9,0:9:24.07:0,24,277	0/0:33,0:32:87.18:0,87,948	0/0:21,0:21:57.17:0,57,656	0/0:23,0:20:45.06:0,45,474	0/0:10,0:10:24.06:0,24,268	0/0:14,0:15:35.17:0,35,443	1/1:2,8:10:18:164,18,0	1/1:2,8:9:21.01:192,21,0	1/1:2,11:14:34.88:280,35,0	0/0:5,0:6:11.11:0,11,167	0/0:24,0:24:45.13:0,45,519	0/0:14,0:14:39.04:0,39,405	0/0:5,0:5:15:0,15,158
chr10	95759031	.	C	CTT	2168.78	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-0.880;DP=344;FS=7.819;HRun=9;HaplotypeScore=49.8053;InbreedingCoeff=0.8943;MQ=58.58;MQ0=7;MQRankSum=-0.150;QD=25.52;ReadPosRankSum=1.867;VQSLOD=2.5654;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:84.15:0,84,886	0/0:8,0:8:15.03:0,15,160	0/0:4,0:1:3.01:0,3,32	0/0:11,0:9:25.20:0,25,241	0/0:6,0:6:15.04:0,15,160	1/1:8,9:16:24.08:370,24,0	1/1:2,6:7:15.05:231,15,0	0/0:35,0:31:81.18:0,81,862	0/0:9,0:9:24.06:0,24,255	1/1:5,11:17:36.10:528,36,0	1/1:2,9:11:30.06:434,30,0	1/1:1,4:5:12.04:184,12,0	1/1:2,4:6:9.03:138,9,0	1/1:2,4:7:9.03:139,9,0	0/0:11,0:11:27.06:0,27,287	0/0:12,0:13:29.74:0,30,281	0/0:23,0:23:57.09:0,57,598	0/0:24,0:24:38.95:0,39,462	0/0:19,0:19:51.11:0,51,543	0/0:11,0:10:24.05:0,24,255	0/0:4,0:3:7.83:0,8,69	1/1:3,1:4:4.26:49,4,0	1/1:2,4:7:13.54:165,14,0	1/1:0,3:3:9.03:138,9,0	0/0:12,0:12:27.05:0,27,287	0/0:19,0:18:48.11:0,48,511	0/0:11,0:11:27.02:0,27,270	0/0:5,0:5:12.01:0,12,128
chr10	95759219	.	C	CT	5459.37	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=7.632;DP=499;FS=17.152;HRun=0;HaplotypeScore=53.6393;InbreedingCoeff=0.9873;MQ=61.49;MQ0=2;MQRankSum=1.113;QD=37.65;ReadPosRankSum=1.962;VQSLOD=3.1726;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.01:0,93,1168	0/0:11,0:11:33.05:0,33,403	0/0:7,0:6:18.06:0,18,252	0/0:7,0:5:9.78:0,10,113	0/0:10,0:10:24.03:0,24,312	1/1:1,14:15:39.13:597,39,0	1/1:0,16:16:33.11:505,33,0	0/0:33,0:33:99:0,99,1309	0/0:17,0:17:51.17:0,51,712	1/1:0,10:10:30.10:458,30,0	1/1:0,8:8:21.07:320,21,0	1/1:0,16:16:42.14:643,42,0	1/1:0,13:13:33.11:505,33,0	1/1:0,16:16:48.16:734,48,0	0/0:19,0:19:57.19:0,57,795	0/0:17,0:17:51.13:0,51,655	0/0:36,0:36:89.35:0,89,1344	0/0:13,0:12:36.09:0,36,480	0/0:18,0:18:54.15:0,54,719	0/0:18,0:18:54.17:0,54,734	0/0:52,0:52:99:0,156,2121	1/1:1,7:7:15.05:230,15,0	1/1:0,12:12:36.12:550,36,0	1/1:1,30:31:60.19:918,60,0	0/0:16,0:16:48.15:0,48,654	0/0:27,0:27:81.26:0,81,1112	0/0:15,0:15:42.13:0,42,568	0/0:7,0:7:21.07:0,21,293
chr10	95759877	.	TC	T	11490.46	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=8.954;DP=578;FS=1.246;HRun=7;HaplotypeScore=59.1327;InbreedingCoeff=0.9508;MQ=91.17;MQ0=0;MQRankSum=-5.562;QD=25.65;ReadPosRankSum=4.328;VQSLOD=5.3278;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:39:93.21:948,93,0	1/1:1,3:4:6.01:61,6,0	0/0:31,0:31:78.21:0,78,938	0/0:17,0:17:42.08:0,42,490	1/1:1,4:5:12.03:122,12,0	1/1:2,18:20:51.11:520,51,0	1/1:3,28:31:75.17:765,75,0	1/1:0,13:13:39.09:398,39,0	1/1:1,26:27:72.16:734,72,0	1/1:1,11:12:36.05:352,36,0	1/1:0,8:8:24.05:245,24,0	1/1:3,30:33:90.20:917,90,0	1/1:0,22:22:54.12:551,54,0	1/1:4,23:27:57.12:579,57,0	1/1:1,12:13:36.08:367,36,0	1/1:2,10:12:27.06:275,27,0	0/0:41,0:41:99:0,117,1390	0/0:41,0:41:99:0,117,1414	1/1:3,10:13:30.04:294,30,0	1/1:1,6:7:18.04:183,18,0	1/1:6,51:57:99:1468,144,0	1/1:0,14:14:39.05:387,39,0	1/1:1,7:8:21.05:214,21,0	1/1:2,24:26:66.15:673,66,0	1/1:2,12:14:36.08:367,36,0	1/1:2,18:20:51.11:519,51,0	1/1:0,19:19:42.10:428,42,0	1/1:0,4:4:12.03:122,12,0
chr10	95760574	.	ACATACACGCGCGCGCG	A	3727.87	PASS	AB=1.000;AC=39;AF=0.750;AN=52;BaseQRankSum=2.636;DP=450;FS=11.343;HRun=0;HaplotypeScore=138.7732;InbreedingCoeff=0.2623;MQ=53.94;MQ0=11;MQRankSum=-3.246;QD=10.71;ReadPosRankSum=-2.728;VQSLOD=1.1955;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:13.02:13,0,1407	1/1:6,0:6:5.72:134,6,0	0/0:22,0:13:23.17:0,23,542	0/1:26,0:13:39.75:40,0,334	1/1:8,0:8:0.94:2,1,0	1/1:12,0:12:6.23:272,6,0	1/1:1,10:11:3.01:132,3,0	0/1:16,0:13:71.80:72,0,387	1/1:19,0:19:6.02:171,6,0	1/1:16,0:16:27.72:655,28,0	./.	1/1:1,17:18:3.01:141,3,0	1/1:4,11:14:5.98:47,6,0	1/1:19,0:19:15.98:354,16,0	1/1:1,8:9:3.01:141,3,0	1/1:11,1:12:9.03:336,9,0	0/0:40,0:39:99:0,99,5516	0/0:26,0:26:12.97:0,13,3371	1/1:7,0:6:18.01:387,18,0	./.	0/1:32,0:32:0:0,0,0	1/1:11,0:11:0.89:2,1,0	0/1:7,0:7:0:0,0,0	1/1:22,0:21:2.99:24,3,0	0/1:16,0:16:2.48:51,0,2	1/1:13,0:12:21.07:612,21,0	1/1:8,0:8:6.02:129,6,0	0/1:10,0:9:11.81:12,0,267
chr10	95760575	.	CAT	C	816.93	PASS	AB=0.974;AC=35;AF=0.673;AN=52;BaseQRankSum=4.725;DP=447;FS=5.623;HRun=0;HaplotypeScore=92.7765;InbreedingCoeff=0.3648;MQ=54.01;MQ0=11;MQRankSum=-2.318;QD=2.54;ReadPosRankSum=0.043;VQSLOD=1.3918;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,1:35:35.40:321,35,0	1/1:6,0:6:2.95:19,3,0	0/0:21,0:12:30.04:0,30,438	0/0:25,0:13:18.14:0,18,265	0/1:8,0:8:0.01:0,0,0	1/1:12,0:12:5.29:33,5,0	1/1:11,0:11:2.64:11,3,0	0/1:16,0:13:33.13:103,0,33	1/1:19,0:19:5.81:33,6,0	1/1:16,0:16:10.92:74,11,0	./.	1/1:17,0:17:2.92:17,3,0	1/1:15,0:14:3.87:25,4,0	1/1:19,0:19:8.83:79,9,0	1/1:9,0:9:2.92:17,3,0	1/1:12,0:12:8.64:50,9,0	0/0:40,0:39:87.06:0,87,1632	0/0:25,0:25:12.95:0,13,828	1/1:7,0:6:9.20:57,9,0	./.	0/1:32,0:32:0:0,0,0	0/1:10,1:11:0:0,0,0	0/1:7,0:7:0:0,0,0	1/1:23,0:22:2.99:24,3,0	0/1:15,1:16:0:0,0,0	0/1:13,0:12:0.86:32,0,1	0/1:8,0:8:1.88:12,0,2	0/1:9,1:9:16.87:54,0,17
chr10	95760576	.	ATACACGCGCGCGCG	A	3777.62	PASS	AB=1.000;AC=38;AF=0.731;AN=52;BaseQRankSum=2.769;DP=437;FS=11.082;HRun=0;HaplotypeScore=124.7859;InbreedingCoeff=0.2630;MQ=53.88;MQ0=12;MQRankSum=-2.694;QD=11.38;ReadPosRankSum=-3.023;VQSLOD=0.5550;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:13.02:13,0,1249	1/1:6,0:6:5.60:134,6,0	0/0:20,0:11:23.17:0,23,542	0/1:24,0:12:40.12:40,0,329	1/1:8,0:8:0.94:2,1,0	1/1:11,0:11:6.26:259,6,0	1/1:10,0:10:3.01:101,3,0	0/1:15,0:12:71.80:72,0,369	1/1:0,19:19:6.02:258,6,0	1/1:0,15:15:27.72:654,28,0	./.	1/1:17,0:17:3.01:110,3,0	1/1:14,0:13:5.98:47,6,0	1/1:19,0:19:16.01:354,16,0	1/1:9,0:9:3.01:110,3,0	1/1:1,11:12:9.03:369,9,0	0/0:40,0:39:99:0,102,5298	0/0:25,0:25:20.57:0,21,3196	1/1:2,5:6:18.01:387,18,0	./.	0/1:30,0:30:0:0,0,0	1/1:1,10:11:0.89:2,1,0	0/0:0,6:6:0:0,0,0	1/1:6,0:21:2.99:24,3,0	0/1:16,0:16:2.43:51,0,2	1/1:1,12:12:21.07:612,21,0	1/1:1,7:8:6.02:160,6,0	0/1:10,0:9:17.56:18,0,265
chr10	95760580	.	ACGCGCGCGCG	A	2466.95	PASS	AB=0.745;AC=30;AF=0.682;AN=44;BaseQRankSum=6.684;DP=424;FS=25.560;HRun=0;HaplotypeScore=108.1480;InbreedingCoeff=0.5629;MQ=53.19;MQ0=12;MQRankSum=-3.632;QD=12.27;ReadPosRankSum=-0.808;VQSLOD=0.3297;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:58.98:0,59,1486	1/1:1,4:5:2.81:91,3,0	0/0:14,0:6:12.04:0,12,277	0/1:21,1:10:29.03:29,0,248	1/1:1,7:8:0.94:1,1,0	1/1:5,7:12:9.02:281,9,0	1/1:10,0:10:3.01:80,3,0	0/0:12,0:9:24.04:0,24,602	1/1:19,0:19:6.02:147,6,0	1/1:15,0:15:24.40:493,24,0	./.	1/1:17,0:17:3.01:79,3,0	./.	1/1:1,17:18:6.80:233,7,0	1/1:8,1:9:3.01:82,3,0	1/1:12,0:12:9.50:225,10,0	0/0:40,0:39:99:0,105,4228	0/0:26,0:26:18.72:0,19,2955	1/1:6,0:5:12.01:260,12,0	./.	./.	1/1:11,0:11:0.89:2,1,0	./.	./.	0/1:2,14:16:2.90:32,0,3	1/1:12,1:12:21.05:458,21,0	1/1:8,0:8:6.02:130,6,0	0/0:11,0:10:16.57:0,17,361
chr10	95760840	.	AACACACAC	A	3830.24	PASS	AB=0.878;AC=22;AF=0.440;AN=50;BaseQRankSum=1.361;DP=680;FS=15.808;HRun=0;HaplotypeScore=180.8036;InbreedingCoeff=0.4198;MQ=71.04;MQ0=14;MQRankSum=-8.684;QD=11.33;ReadPosRankSum=-3.607;VQSLOD=1.0878;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:34:23.68:0,24,301	0/1:7,1:8:66.13:66,0,77	./.	./.	./.	0/0:12,0:14:15.03:0,15,264	0/1:22,1:32:69.09:69,0,344	0/1:34,0:31:4.95:5,0,22	1/1:21,13:40:53.21:1090,53,0	0/0:15,0:19:30.06:0,30,763	0/0:7,0:10:15.03:0,15,286	0/1:17,0:19:37.39:37,0,233	0/0:10,0:19:15.03:0,15,283	0/0:14,0:17:9.01:0,9,135	1/1:17,16:33:26.83:624,27,0	0/1:15,10:25:99:407,0,119	0/0:17,0:30:60.04:0,60,1225	0/0:8,0:21:42.09:0,42,792	1/1:18,0:21:0.74:51,1,0	1/1:5,6:11:9.03:206,9,0	0/1:55,0:55:14.96:87,0,15	0/0:15,0:18:15:0,15,207	0/0:12,0:15:20.89:0,21,410	0/0:29,0:42:59.81:0,60,918	1/1:7,7:14:12.04:283,12,0	1/1:13,13:28:11.18:551,11,0	1/1:6,5:11:12.04:297,12,0	1/1:5,0:7:3.01:56,3,0
chr10	95761001	.	G	GTA	27959.24	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-15.540;DP=778;FS=2.664;HRun=0;HaplotypeScore=81.4656;InbreedingCoeff=0.9999;MQ=82.30;MQ0=0;MQRankSum=-4.459;QD=48.12;ReadPosRankSum=5.287;VQSLOD=6.1932;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,117,1756	1/1:0,14:14:33.11:637,33,0	0/0:20,0:20:60.18:0,60,839	0/0:24,0:24:50.90:0,51,925	1/1:0,26:30:72.25:1386,72,0	1/1:1,27:28:78.27:1506,78,0	1/1:0,28:28:63.22:1217,63,0	0/0:33,0:33:93.77:0,94,1381	1/1:0,30:30:78.27:1504,78,0	1/1:1,26:29:84.25:1545,84,0	1/1:1,15:17:45.15:867,45,0	1/1:2,18:20:45.15:869,45,0	1/1:1,24:26:63.22:1217,63,0	1/1:1,23:24:57.20:1100,57,0	1/1:1,36:38:99:2010,105,0	1/1:0,38:39:96.33:1852,96,0	0/0:36,0:36:99:0,105,1600	0/0:25,0:25:72.20:0,72,1046	1/1:1,18:21:60.19:1104,60,0	1/1:0,20:21:63.22:1215,63,0	1/1:0,39:39:87.30:1680,87,0	1/1:2,41:44:99:1967,102,0	1/1:0,18:19:48.16:925,48,0	1/1:1,41:42:99:1912,99,0	1/1:0,22:22:48.16:926,48,0	1/1:2,28:31:90.29:1650,90,0	1/1:1,18:18:44.73:867,45,0	0/0:16,0:16:45.15:0,45,689
chr10	95761424	.	TCTC	T	9400.96	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.447;DP=772;FS=1.324;HRun=0;HaplotypeScore=114.9012;InbreedingCoeff=0.9993;MQ=90.14;MQ0=1;MQRankSum=-2.509;QD=35.21;ReadPosRankSum=4.482;VQSLOD=5.7045;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,2559	1/1:0,7:7:21.07:325,21,0	0/0:31,0:31:75.23:0,75,1435	0/0:36,0:36:82.61:0,83,1411	1/1:4,18:22:44.86:696,45,0	0/0:25,0:25:75.26:0,75,1610	0/0:40,0:40:99:0,117,2410	0/0:27,0:27:81.24:0,81,1579	1/1:5,31:36:78.26:1189,78,0	0/0:32,0:32:81.28:0,81,1701	0/0:20,0:20:57.20:0,57,1224	0/0:30,0:30:90.31:0,90,1918	0/0:24,0:24:63.22:0,63,1333	0/0:22,0:22:57.18:0,57,1181	1/1:1,11:12:30.10:464,30,0	1/1:0,22:22:54.18:835,54,0	0/0:40,0:40:99:0,114,2366	0/0:23,0:23:60.19:0,60,1232	1/1:2,16:18:48.15:722,48,0	1/1:2,23:25:60.20:928,60,0	1/1:8,44:51:95.91:1468,96,0	0/0:26,0:26:72.24:0,72,1474	0/0:19,0:19:57.17:0,57,1135	0/0:38,0:38:99:0,105,2196	1/1:1,25:26:66.22:1021,66,0	1/1:4,24:28:69.23:1057,69,0	1/1:2,17:19:45.03:696,45,0	0/0:27,0:27:78.23:0,78,1546
chr10	95762167	.	C	CA	5838.37	PASS	AB=0.701;AC=40;AF=0.714;AN=56;BaseQRankSum=-4.559;DP=720;FS=1.429;HRun=14;HaplotypeScore=91.0761;InbreedingCoeff=0.0017;MQ=82.31;MQ0=3;MQRankSum=0.439;QD=8.65;ReadPosRankSum=-1.170;VQSLOD=3.9612;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,34:52:41.93:514,0,42	1/1:3,6:9:15:132,15,0	0/1:48,0:25:11.39:11,0,72	0/1:40,1:26:15.76:16,0,72	0/1:11,10:22:11.13:256,0,11	1/1:8,18:26:22.69:317,23,0	0/1:6,13:19:12.61:111,0,13	1/1:11,0:26:13.81:240,14,0	1/1:7,16:23:18:158,18,0	1/1:9,19:29:24.17:435,24,0	1/1:6,11:18:23.20:178,23,0	1/1:5,12:19:8.89:89,9,0	0/1:15,4:19:17.34:204,0,17	0/1:7,9:17:4.85:72,0,5	1/1:9,18:28:22.56:309,23,0	0/1:5,15:21:0.55:94,0,1	0/0:24,0:26:11.79:0,12,258	0/0:19,0:19:47.16:0,47,305	1/1:8,12:20:21.45:282,21,0	1/1:11,4:26:39.86:395,40,0	0/1:12,6:19:37.34:73,0,37	0/1:10,17:29:30.28:256,0,30	1/1:5,12:18:17.05:167,17,0	1/1:8,25:35:35.08:405,35,0	0/1:11,19:33:37.49:209,0,37	1/1:5,21:27:61.17:479,61,0	0/1:10,20:36:2.12:326,0,2	1/1:4,1:14:20.04:111,20,0
chr10	95763371	.	TCCTGGTTTTTTCCACCTCCATCAAATA	T	2887.32	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.764;DP=626;FS=2.110;HRun=0;HaplotypeScore=414.7865;InbreedingCoeff=0.9276;MQ=87.12;MQ0=1;MQRankSum=-5.569;QD=53.47;ReadPosRankSum=2.186;VQSLOD=1.2749;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,11:23:27.01:1896,27,0	0/0:13,0:13:39.12:0,39,3835	0/0:35,0:35:69.67:0,70,4894	0/0:19,0:18:39.57:0,40,2440	0/0:10,0:10:30.10:0,30,3304	0/0:19,0:19:54.19:0,54,5499	0/0:27,0:27:81.26:0,81,9263	1/1:25,0:25:3:27,3,0	0/0:34,0:34:99:0,102,11763	0/0:34,0:34:99:0,102,11205	0/0:18,0:18:51.18:0,51,5226	0/0:20,0:20:60.21:0,60,6993	0/0:29,0:29:87.30:0,87,9228	0/0:18,0:18:51.18:0,51,6054	0/0:28,0:28:81.26:0,81,8984	0/0:22,0:22:63.22:0,63,7193	0/0:26,0:26:78.27:0,78,8991	0/0:25,0:25:69.24:0,69,8053	0/0:17,0:17:45.15:0,45,3924	0/0:19,0:19:57.20:0,57,6491	0/0:32,0:32:90.31:0,90,10645	0/0:19,0:19:54.17:0,54,5976	0/0:23,0:23:69.22:0,69,6712	0/0:23,0:23:63.22:0,63,7037	0/0:22,0:22:66.23:0,66,6899	0/0:26,0:26:78.27:0,78,9019	0/0:14,0:14:39.13:0,39,4790	1/1:2,4:6:15.05:1094,15,0
chr10	95764393	.	TAA	T	3971.23	PASS	AB=0.595;AC=25;AF=0.446;AN=56;BaseQRankSum=-7.688;DP=533;FS=1.322;HRun=15;HaplotypeScore=84.1927;InbreedingCoeff=0.8740;MQ=63.50;MQ0=1;MQRankSum=0.768;QD=15.70;ReadPosRankSum=3.968;VQSLOD=3.1554;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,3:35:18.64:0,19,212	1/1:3,6:9:17.96:158,18,0	0/0:11,0:9:5.35:0,5,29	0/0:17,0:12:11.79:0,12,140	1/1:7,19:26:50.87:447,51,0	0/0:4,0:15:26.99:0,27,244	0/0:2,0:16:33.01:0,33,313	1/1:10,27:36:62.70:554,63,0	1/1:1,12:13:29.99:264,30,0	0/0:10,0:23:55.06:0,55,522	0/0:8,0:25:56.95:0,57,531	0/0:8,0:20:18:0,18,174	0/0:4,0:10:18.03:0,18,184	0/0:3,0:14:17.99:0,18,171	1/1:3,13:18:22.25:269,22,0	1/1:2,12:13:29.96:264,30,0	0/0:11,0:41:69.10:0,69,690	0/0:6,0:15:29.96:0,30,301	1/1:4,18:24:23.98:437,24,0	1/1:7,14:21:29.79:264,30,0	1/1:3,9:12:23.93:211,24,0	0/0:5,0:9:3:0,3,28	0/0:3,0:13:22.11:0,22,223	0/0:3,0:12:6.01:0,6,57	1/1:6,15:23:29.15:220,29,0	0/1:7,15:22:6.35:303,0,6	1/1:5,15:21:47.66:406,48,0	1/1:3,6:12:17.30:173,17,0
chr10	95764407	.	AAG	A	206.01	PASS	AB=0.997;AC=12;AF=0.214;AN=56;BaseQRankSum=3.699;DP=539;FS=41.934;HRun=0;HaplotypeScore=96.8527;InbreedingCoeff=-0.0503;MQ=64.30;MQ0=2;MQRankSum=0.344;QD=0.98;ReadPosRankSum=7.015;VQSLOD=-0.6934;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:84.22:0,84,644	0/1:8,0:8:24.42:24,0,35	0/0:12,0:8:13.30:0,13,141	0/0:19,0:12:25.92:0,26,314	0/1:23,0:23:58.81:73,0,59	0/0:16,0:16:29.84:0,30,290	0/0:22,0:21:48.06:0,48,489	0/1:34,1:34:24.30:24,0,152	0/1:14,0:14:27.30:27,0,32	0/0:23,0:22:15.49:0,15,520	0/0:23,0:23:47.76:0,48,550	0/0:18,0:17:20.45:0,20,173	0/0:11,0:11:24.03:0,24,264	0/0:15,0:15:20.61:0,21,179	0/1:20,0:20:10.76:11,0,81	0/1:15,0:14:6.03:6,0,58	0/0:39,0:38:78.16:0,78,875	0/0:15,0:15:33.06:0,33,385	0/1:27,0:27:5.96:6,0,116	0/1:16,0:16:2.19:2,0,64	0/0:14,0:14:5.26:0,5,108	0/0:6,0:6:6:0,6,58	0/0:16,0:16:23.57:0,24,231	0/0:11,0:11:8.98:0,9,80	0/1:25,0:25:26.91:27,0,117	0/0:22,1:23:6.60:0,7,142	1/1:17,2:19:21.84:143,22,0	0/1:9,0:9:7.72:8,0,16
chr10	95764598	.	AG	A	11930.01	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=2.131;DP=622;FS=1.709;HRun=1;HaplotypeScore=144.7942;InbreedingCoeff=0.9648;MQ=87.62;MQ0=0;MQRankSum=-4.623;QD=36.60;ReadPosRankSum=1.650;VQSLOD=4.5482;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1605	1/1:0,13:13:36.12:503,36,0	0/0:21,0:21:57.08:0,57,854	0/0:26,0:26:78.23:0,78,1209	1/1:0,16:16:36.12:503,36,0	0/0:22,0:22:63.21:0,63,996	0/0:30,0:30:90.31:0,90,1436	1/1:0,19:19:57.17:775,57,0	1/1:0,22:22:66.22:922,66,0	0/0:13,0:13:39.13:0,39,624	0/0:17,0:17:48.13:0,48,720	0/0:24,0:24:69.24:0,69,1099	0/0:20,0:20:57.19:0,57,909	0/0:18,0:18:51.17:0,51,815	1/1:0,19:19:57.19:797,57,0	1/1:1,21:22:63.13:856,63,0	1/1:0,40:40:99:1426,102,0	1/1:0,19:19:51.17:713,51,0	1/1:0,22:22:66.22:919,66,0	1/1:0,25:25:54.18:755,54,0	1/1:0,36:36:84.28:1174,84,0	0/0:12,0:12:36.12:0,36,575	0/0:18,0:18:51.15:0,51,769	0/0:39,0:39:99:0,108,1724	1/1:0,17:17:39.13:545,39,0	1/1:1,16:17:0.17:579,0,0	1/1:1,26:27:69.23:961,69,0	1/1:0,12:12:36.12:503,36,0
chr10	95765127	.	CCAA	C	6727.66	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=-10.502;DP=676;FS=3.938;HRun=0;HaplotypeScore=143.9220;InbreedingCoeff=0.7032;MQ=70.36;MQ0=4;MQRankSum=-0.637;QD=22.58;ReadPosRankSum=-0.294;VQSLOD=4.8714;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,2043	0/0:8,0:8:24.06:0,24,286	0/0:45,0:34:24.57:0,25,770	0/0:42,1:35:45.21:0,45,800	0/1:21,0:21:24.28:24,0,516	1/1:1,11:12:18.06:270,18,0	1/1:4,27:31:60.20:903,60,0	0/0:19,0:19:33.11:0,33,650	0/0:33,0:33:69.22:0,69,869	1/1:7,18:25:54.13:744,54,0	1/1:5,10:15:21.07:316,21,0	1/1:4,22:26:56.96:856,57,0	1/1:3,15:18:39.13:587,39,0	1/1:3,13:16:36.12:542,36,0	0/0:23,0:23:69.20:0,69,862	0/0:20,0:20:31.22:0,31,661	0/0:40,0:40:58.41:0,58,1237	0/0:27,0:27:43.21:0,43,750	0/1:21,0:21:98.57:99,0,278	0/1:11,0:11:65.73:66,0,254	0/1:26,0:26:55.61:56,0,577	1/1:4,12:16:33.11:490,33,0	1/1:2,16:18:17.93:269,18,0	1/1:2,40:42:99:1509,102,0	0/0:24,0:24:39.25:0,39,748	0/0:26,0:26:20.19:0,20,715	0/0:24,0:23:44.63:0,45,731	0/0:6,0:6:18.06:0,18,359
chr10	95765396	.	G	GCACACA	8534.02	PASS	AB=0.833;AC=26;AF=0.464;AN=56;BaseQRankSum=-1.074;DP=660;FS=4.329;HRun=0;HaplotypeScore=195.3430;InbreedingCoeff=0.8312;MQ=61.64;MQ0=3;MQRankSum=-10.309;QD=28.54;ReadPosRankSum=-2.401;VQSLOD=4.3167;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:13.97:0,14,1509	1/1:4,2:6:6.02:200,6,0	0/0:32,0:25:56.11:0,56,1062	0/0:30,0:27:68.97:0,69,1364	1/1:9,14:28:30.01:935,30,0	0/0:24,0:24:63.06:0,63,873	0/0:24,0:24:61.90:0,62,780	1/1:8,0:28:53.85:745,54,0	1/1:1,5:12:21.05:512,21,0	0/0:18,0:18:11.78:0,12,448	0/0:14,0:14:29.94:0,30,354	0/0:25,0:25:16.24:0,16,790	0/0:20,0:20:28.60:0,29,635	0/0:18,0:18:29.21:0,29,704	1/1:3,14:20:30:871,30,0	1/1:2,5:10:10.91:289,11,0	0/1:45,0:45:6.12:6,0,1285	0/0:36,0:38:40.70:0,41,1071	1/1:5,15:24:47.46:1296,47,0	1/1:2,16:23:15.02:496,15,0	1/1:3,10:22:11.82:174,12,0	0/0:15,0:15:36.08:0,36,506	0/0:21,0:21:26.91:0,27,657	0/0:24,0:24:55.20:0,55,820	1/1:2,12:15:16.59:787,17,0	1/1:3,16:24:19.20:1182,19,0	1/1:4,18:24:30.57:913,31,0	0/1:9,0:18:95.25:129,0,95
chr10	95766346	.	TTCTA	T	2700.05	PASS	AC=22;AF=0.407;AN=54;BaseQRankSum=5.001;DP=318;FS=35.973;HRun=0;HaplotypeScore=95.7492;InbreedingCoeff=0.9394;MQ=102.94;MQ0=0;MQRankSum=-8.105;QD=30.34;ReadPosRankSum=1.413;VQSLOD=1.8159;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:9:18.06:342,18,0	./.	0/0:27,0:27:66.12:0,66,1595	0/0:29,0:29:69.54:0,70,1581	1/1:0,6:6:5.36:39,5,0	0/0:10,0:10:30.10:0,30,765	0/0:16,0:16:42.14:0,42,1090	0/0:18,0:18:54.18:0,54,1398	1/1:0,5:5:11.79:227,12,0	0/0:11,0:11:33.11:0,33,846	0/0:6,0:6:18.06:0,18,486	0/0:11,0:11:33.11:0,33,877	0/0:12,0:12:33.11:0,33,887	0/0:12,0:12:30.09:0,30,752	1/1:0,7:7:18.06:342,18,0	1/1:1,8:9:15.05:285,15,0	0/0:11,0:11:33.11:0,33,848	0/0:16,0:16:45.15:0,45,1179	1/1:0,8:8:24.05:363,24,0	1/1:0,9:9:24.08:455,24,0	1/1:1,14:15:5.86:76,6,0	0/0:11,0:11:30.10:0,30,810	0/0:6,0:6:18.06:0,18,464	0/0:27,0:27:69.24:0,69,1829	1/1:0,7:7:12:191,12,0	1/1:0,5:5:12.02:195,12,0	1/1:1,8:9:21.07:398,21,0	0/0:4,0:4:12.04:0,12,324
chr10	95766469	.	G	GGGC	4942.70	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-3.368;DP=298;FS=29.741;HRun=0;HaplotypeScore=64.6089;InbreedingCoeff=0.9435;MQ=90.83;MQ0=0;MQRankSum=-3.595;QD=53.15;ReadPosRankSum=4.008;VQSLOD=3.8543;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:9:21.07:514,21,0	1/1:2,3:5:15.05:333,15,0	0/0:12,0:12:36.12:0,36,629	0/0:17,0:17:36.97:0,37,791	1/1:5,4:9:11.83:293,12,0	0/0:9,0:9:12.04:0,12,223	0/0:16,0:16:39.13:0,39,698	0/0:23,0:23:48.12:0,48,851	1/1:0,7:9:21.07:497,21,0	0/0:7,0:7:18.06:0,18,328	0/0:6,0:6:15.05:0,15,279	0/0:11,0:11:33.11:0,33,610	0/0:5,0:5:9.03:0,9,168	0/0:4,0:4:12.04:0,12,204	1/1:0,7:7:21.07:517,21,0	1/1:1,4:6:15.05:358,15,0	0/0:34,0:34:99:0,99,1819	0/0:22,0:22:42.14:0,42,781	1/1:1,4:6:9.03:216,9,0	1/1:2,8:10:24.55:591,25,0	1/1:1,9:10:12.04:295,12,0	0/0:4,0:4:12.04:0,12,211	0/0:6,0:6:15.04:0,15,232	0/0:13,0:13:36.12:0,36,669	1/1:0,4:4:12.04:294,12,0	1/1:1,5:6:15.05:367,15,0	1/1:1,11:12:30.06:667,30,0	0/0:16,0:16:39.13:0,39,727
chr10	95766517	.	T	TAAAAAAA	2302.28	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=-2.598;DP=240;FS=12.687;HRun=0;HaplotypeScore=95.9932;InbreedingCoeff=-0.0780;MQ=74.26;MQ0=1;MQRankSum=-3.902;QD=17.85;ReadPosRankSum=0.223;VQSLOD=1.4655;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:10:66.80:99,0,67	0/0:6,0:6:8.87:0,9,62	0/0:10,0:10:23.95:0,24,491	0/0:12,0:11:21.42:0,21,344	0/1:13,0:13:25.52:26,0,46	0/1:12,0:12:12.87:178,0,13	0/1:8,0:8:27.05:27,0,165	0/0:20,0:18:22.01:0,22,410	0/0:5,0:5:12.12:0,12,70	0/0:8,0:8:20.95:0,21,211	0/0:8,0:8:23.19:0,23,176	0/1:7,0:7:34.23:34,0,127	0/0:1,0:1:3.01:0,3,33	0/1:5,0:5:26.98:27,0,79	0/0:8,0:8:3.32:0,3,109	0/0:3,0:3:4.71:0,5,34	1/1:5,7:20:54.08:1226,54,0	1/1:0,8:15:18.06:628,18,0	0/1:4,0:4:42.21:49,0,42	0/1:10,0:10:12.70:13,0,157	0/1:3,0:2:0.49:0,0,25	0/0:7,0:7:20.89:0,21,185	0/1:6,0:6:46.91:47,0,120	0/0:7,0:7:17.17:0,17,110	0/0:4,0:4:11.79:0,12,89	0/1:8,0:8:58.65:59,0,78	0/0:12,0:12:20.35:0,20,129	0/1:8,0:8:52.58:53,0,60
chr10	95766518	.	T	TAAAAAACAAAACAAAAAAAAAAAAAAC	26523.40	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=-5.311;DP=330;FS=30.124;HRun=0;HaplotypeScore=246.5658;InbreedingCoeff=0.4400;MQ=64.61;MQ0=1;MQRankSum=-4.312;QD=86.11;ReadPosRankSum=-1.138;VQSLOD=3.0474;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:17.18:484,17,0	1/1:8,0:8:10.78:268,11,0	0/0:9,0:10:20.43:0,20,610	0/0:11,0:11:19.40:0,19,274	1/1:14,0:13:29.02:943,29,0	1/1:4,0:16:21.07:1898,21,0	1/1:14,0:14:36.12:2577,36,0	1/1:26,0:24:66.21:2584,66,0	1/1:8,0:7:6.79:320,7,0	1/1:20,0:20:55.43:3535,55,0	1/1:8,0:7:21.07:843,21,0	1/1:12,0:12:33.10:1555,33,0	1/1:6,0:6:18.06:1242,18,0	1/1:10,0:10:24.08:1771,24,0	1/1:10,0:10:17.54:485,18,0	1/1:5,0:5:9.03:250,9,0	0/1:22,0:22:99:304,0,207	0/1:11,0:11:79.11:157,0,79	1/1:9,0:9:5.26:194,5,0	1/1:14,0:13:30.06:767,30,0	1/1:3,0:2:5.98:64,6,0	1/1:12,0:12:30.10:2123,30,0	1/1:9,0:9:21.07:1407,21,0	1/1:10,0:10:18.02:761,18,0	1/1:6,0:6:6.49:122,6,0	1/1:12,0:12:27.09:579,27,0	1/1:18,0:18:1.60:873,2,0	1/1:4,1:9:6.02:415,6,0
chr10	95766603	.	CAAAAACA	C	1062.54	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=5.869;DP=491;FS=4.432;HRun=0;HaplotypeScore=118.4682;InbreedingCoeff=0.7683;MQ=70.81;MQ0=1;MQRankSum=-4.691;QD=17.42;ReadPosRankSum=-1.350;VQSLOD=2.8768;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:66.23:0,66,2342	0/0:13,0:11:27.09:0,27,906	0/1:25,0:18:16.01:16,0,358	0/0:32,0:21:18.39:0,18,613	0/0:14,0:12:33.10:0,33,991	0/0:23,0:23:63.21:0,63,2242	0/0:25,0:24:65.80:0,66,1805	0/0:27,0:27:57.08:0,57,1560	0/0:18,0:18:48.16:0,48,1665	0/0:20,0:20:48.64:0,49,1646	0/0:13,0:12:36.12:0,36,1183	0/0:15,0:15:39.13:0,39,1299	0/0:14,0:13:39.13:0,39,1246	0/0:16,0:15:36.11:0,36,1095	0/0:14,0:14:42.12:0,42,1339	0/0:17,0:17:44.98:0,45,1527	1/1:5,22:27:33.11:739,33,0	1/1:6,3:9:21.07:435,21,0	0/0:12,0:12:36.12:0,36,1141	0/0:15,0:14:32.60:0,33,1071	0/0:11,0:11:30.57:0,31,1002	0/0:18,0:18:42.14:0,42,1551	0/0:15,0:15:39.11:0,39,1155	0/0:21,0:19:51.18:0,51,1783	0/0:10,0:10:27.09:0,27,956	0/0:19,0:18:42.14:0,42,1423	0/0:17,0:16:51.07:0,51,1587	0/0:4,0:4:12.04:0,12,350
chr10	95767239	.	ATGTG	A	15833.10	PASS	AB=0.531;AC=23;AF=0.411;AN=56;BaseQRankSum=21.100;DP=1135;FS=7.649;HRun=0;HaplotypeScore=260.8602;InbreedingCoeff=0.9259;MQ=55.83;MQ0=10;MQRankSum=1.965;QD=34.27;ReadPosRankSum=8.280;VQSLOD=3.0903;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:34:54.16:990,54,0	1/1:2,12:14:27.09:491,27,0	0/0:44,0:21:60.20:0,60,1355	0/0:62,0:41:99:0,100,2204	1/1:1,32:33:54.18:975,54,0	0/0:38,0:38:99:0,102,2539	0/0:26,0:26:66.17:0,66,1615	0/0:56,0:56:99:0,163,3806	1/1:3,43:46:93.32:1721,93,0	0/0:71,0:71:99:0,202,5091	0/0:27,0:27:72.14:0,72,1848	0/0:55,0:55:99:0,157,3962	0/0:48,0:48:99:0,144,3712	0/0:38,0:38:99:0,108,2696	1/1:1,50:51:90.31:1707,90,0	1/1:1,38:39:72.25:1344,72,0	0/0:33,0:32:78.54:0,79,1813	0/0:38,0:38:94.01:0,94,2267	1/1:5,25:29:35.36:1223,35,0	1/1:0,31:31:57.19:1036,57,0	1/1:11,74:85:99:2489,129,0	0/0:42,0:42:99:0,111,2699	0/0:35,0:35:99:0,99,2438	0/0:38,0:38:96.29:0,96,2358	1/1:3,21:24:27.86:791,28,0	0/1:5,38:43:99:1875,0,190	1/1:2,30:32:66.22:1191,66,0	0/0:22,0:22:60.14:0,60,1397
chr10	95767411	.	CAT	C	15344.76	PASS	AB=0.914;AC=25;AF=0.446;AN=56;BaseQRankSum=18.640;DP=1123;FS=8.387;HRun=0;HaplotypeScore=161.3801;InbreedingCoeff=0.9275;MQ=55.89;MQ0=16;MQRankSum=2.407;QD=30.03;ReadPosRankSum=2.432;VQSLOD=6.1488;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:43:99:0,102,1889	0/0:15,0:15:27.07:0,27,475	0/0:53,0:28:78.07:0,78,1138	0/0:53,0:27:73.85:0,74,1225	0/0:36,0:36:90:0,90,1708	1/1:0,35:35:87.30:1413,87,0	1/1:2,39:41:93.32:1507,93,0	1/1:0,30:28:74.80:982,75,0	0/0:52,0:52:99:0,129,2488	1/1:1,59:60:99:2265,165,0	1/1:0,21:21:33.11:534,33,0	1/1:0,55:53:99:1941,120,0	1/1:1,45:43:99:1641,105,0	1/1:0,26:26:60.20:973,60,0	0/0:52,0:52:99:0,129,2400	0/0:40,0:40:99:0,108,1975	0/0:33,0:33:71.73:0,72,1696	0/0:30,0:30:78.90:0,79,1556	0/0:23,0:22:63.18:0,63,1134	0/0:39,0:39:99:0,114,2196	0/0:91,0:91:99:0,256,4841	1/1:0,37:37:54.08:844,54,0	1/1:0,24:24:32.92:535,33,0	1/1:6,55:60:99:1935,112,0	0/0:28,0:28:59.75:0,60,1180	0/1:48,5:53:58.15:58,0,2582	0/0:23,0:23:69.22:0,69,1355	1/1:3,19:20:38.49:716,38,0
chr10	95767412	.	ATG	A	8089.85	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=21.453;DP=1126;FS=3.681;HRun=0;HaplotypeScore=187.4541;InbreedingCoeff=0.9992;MQ=55.93;MQ0=16;MQRankSum=2.389;QD=17.66;ReadPosRankSum=2.254;VQSLOD=5.1196;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:44:93.62:0,94,1543	0/0:15,0:15:21.07:0,21,360	0/0:54,1:29:64.45:0,64,996	0/0:53,0:27:68.01:0,68,1072	0/0:38,0:38:88.31:0,88,1487	1/1:35,0:35:86.95:742,87,0	1/1:40,1:41:93.04:841,93,0	1/1:30,0:28:41.13:436,41,0	0/0:51,0:51:99:0,120,2057	1/1:59,0:60:99:1060,102,0	1/1:21,0:21:32.99:289,33,0	1/1:55,0:53:99:1044,120,0	1/1:45,1:43:99:960,105,0	1/1:26,0:26:60.01:528,60,0	0/0:52,0:52:99:0,111,1904	0/0:40,0:40:90.31:0,90,1539	0/0:34,0:34:62.72:0,63,1510	0/0:30,0:30:69.23:0,69,1277	0/0:22,0:21:51.17:0,51,875	0/0:38,0:38:99:0,105,1798	0/0:90,2:92:99:0,244,4041	1/1:37,0:37:51.85:433,52,0	1/1:24,0:24:32.81:292,33,0	1/1:60,1:60:99:1050,102,0	0/0:28,0:28:56.75:0,57,977	0/0:53,0:53:28.61:0,29,2146	0/0:23,0:23:66.23:0,66,1131	1/1:22,0:20:37.52:414,38,0
chr10	95767674	.	T	TC	1289.91	PASS	AB=0.929;AC=13;AF=0.232;AN=56;BaseQRankSum=6.055;DP=450;FS=13.168;HRun=1;HaplotypeScore=90.3828;InbreedingCoeff=0.5551;MQ=43.14;MQ0=4;MQRankSum=5.119;QD=7.68;ReadPosRankSum=0.141;VQSLOD=-0.4257;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:32.62:0,33,220	0/0:8,0:8:23.76:0,24,162	0/0:18,0:6:17.57:0,18,131	0/0:13,0:5:14.14:0,14,104	0/0:10,0:9:20.73:0,21,136	0/1:18,0:18:3.25:233,0,3	0/0:4,14:16:5.90:0,6,38	0/0:30,0:29:62.47:0,62,451	0/0:8,0:8:23.70:0,24,156	1/1:7,26:33:23.14:434,23,0	1/1:8,14:21:1.63:55,2,0	0/1:19,0:18:6.43:223,0,6	1/1:19,0:19:28.43:237,28,0	0/1:14,0:14:8.34:105,0,8	0/0:13,0:13:38.63:0,39,273	0/0:9,0:9:23.69:0,24,155	0/0:26,0:25:56.64:0,57,447	0/0:21,0:20:53.50:0,54,446	0/0:7,0:6:14.94:0,15,121	0/0:17,0:15:41.58:0,42,288	0/0:11,0:9:11.83:0,12,77	1/1:19,0:19:17.37:123,17,0	0/1:4,5:9:5.96:42,0,6	0/1:15,0:14:3.60:4,0,7	0/0:15,0:12:29.62:0,30,195	0/0:19,0:18:30.47:0,30,317	0/0:9,0:9:26.80:0,27,190	0/0:17,0:17:41.41:0,41,305
chr10	95767675	.	C	CCTTT	2198.18	PASS	AB=0.989;AC=22;AF=0.393;AN=56;BaseQRankSum=-2.702;DP=488;FS=5.202;HRun=0;HaplotypeScore=197.7410;InbreedingCoeff=0.6994;MQ=41.78;MQ0=5;MQRankSum=-1.027;QD=7.91;ReadPosRankSum=-7.108;VQSLOD=0.1983;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:24.75:0,25,196	0/0:8,0:8:23.78:0,24,166	0/0:17,0:6:17.43:0,17,151	0/0:12,0:5:12.45:0,12,115	0/0:9,0:8:23.68:0,24,156	1/1:20,0:20:52.06:365,52,0	0/1:22,0:20:10.23:29,0,10	0/1:32,0:31:48.69:49,0,351	0/0:8,0:8:20.01:0,20,141	1/1:31,0:31:64.05:498,64,0	1/1:25,0:23:19.95:144,20,0	1/1:22,0:21:53.98:415,54,0	1/1:23,0:23:45.82:306,46,0	1/1:18,0:18:35.71:217,36,0	0/0:13,0:13:38.65:0,39,276	0/0:8,0:8:23.74:0,24,165	0/0:23,0:29:55.97:0,56,582	0/0:16,0:22:54.14:0,54,586	0/0:6,0:5:14.94:0,15,121	0/0:17,0:15:39.06:0,39,269	0/1:11,0:9:3.42:3,0,47	1/1:7,12:24:25.67:199,26,0	1/1:12,0:12:16.02:111,16,0	1/1:5,0:17:5.44:24,5,0	0/0:15,0:12:32.56:0,33,213	0/0:20,0:19:32.79:0,33,335	0/0:9,0:9:26.32:0,26,181	0/1:20,0:21:47.68:48,0,200
chr10	95768499	.	G	GCGGCATT	14314.08	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-12.596;DP=674;FS=5.085;HRun=0;HaplotypeScore=211.8624;InbreedingCoeff=0.9978;MQ=73.86;MQ0=0;MQRankSum=-15.929;QD=64.77;ReadPosRankSum=-3.097;VQSLOD=3.6305;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,117,2763	0/0:6,0:6:18.05:0,18,393	0/0:26,0:25:57.08:0,57,1073	0/0:25,0:25:41.97:0,42,749	0/0:23,0:23:60.18:0,60,1343	1/1:12,15:27:57.11:1996,57,0	1/1:7,12:23:33.11:1202,33,0	0/0:23,0:23:51.17:0,51,1173	0/0:21,0:21:48.12:0,48,1072	1/1:4,15:21:57.20:2054,57,0	1/1:9,13:22:42.14:1499,42,0	1/1:14,11:26:47.96:1804,48,0	1/1:14,16:32:54.19:1967,54,0	1/1:5,8:14:30.10:1104,30,0	0/0:24,0:24:57.20:0,57,1378	0/0:30,0:30:75.25:0,75,1752	0/0:30,0:30:75.24:0,75,1780	0/0:16,0:16:45.12:0,45,1040	0/0:24,0:24:48.14:0,48,1120	0/0:20,0:20:54.16:0,54,1271	0/0:47,0:47:99:0,108,2486	1/1:9,11:21:30.10:1072,30,0	1/1:4,7:12:20.54:709,21,0	1/1:12,8:22:29.68:908,30,0	0/0:20,0:19:45.15:0,45,1096	0/0:28,0:28:69.22:0,69,1643	0/0:27,0:27:72.25:0,72,1737	0/0:16,0:16:42.14:0,42,1030
chr10	95768981	.	ATCT	A	19108.24	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=14.331;DP=708;FS=0.000;HRun=0;HaplotypeScore=130.6813;InbreedingCoeff=0.9985;MQ=84.29;MQ0=0;MQRankSum=-5.021;QD=35.06;ReadPosRankSum=7.002;VQSLOD=5.2441;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,56:58:99:2021,126,0	1/1:0,12:12:33.07:502,33,0	0/0:25,0:25:66.23:0,66,1419	0/0:23,0:23:54.19:0,54,1159	1/1:1,13:14:21.07:334,21,0	1/1:2,16:18:39.09:598,39,0	1/1:1,21:22:45.15:723,45,0	0/0:35,0:35:99:0,102,2116	1/1:1,25:26:66.18:1032,66,0	1/1:4,25:29:75.26:1205,75,0	1/1:1,14:15:33.11:529,33,0	1/1:1,28:29:75.26:1205,75,0	1/1:4,20:24:54.14:839,54,0	1/1:2,18:20:51.17:816,51,0	1/1:2,29:31:75.26:1205,75,0	1/1:1,24:25:57.15:888,57,0	0/0:36,0:36:99:0,105,2221	0/0:35,0:34:99:0,105,2256	1/1:4,15:19:42.12:640,42,0	1/1:1,11:13:27.05:406,27,0	1/1:4,41:45:86.80:1381,87,0	1/1:3,15:18:33.11:530,33,0	1/1:3,22:25:41.88:674,42,0	1/1:1,20:21:35.69:578,36,0	1/1:3,26:29:60.20:964,60,0	1/1:0,25:25:69.17:1026,69,0	1/1:3,24:27:63.21:1012,63,0	0/0:9,0:9:27.09:0,27,596
chr10	95769517	.	GAC	G	1149.46	PASS	AB=0.952;AC=15;AF=0.268;AN=56;BaseQRankSum=12.508;DP=473;FS=21.996;HRun=0;HaplotypeScore=75.4339;InbreedingCoeff=-0.2044;MQ=70.84;MQ0=1;MQRankSum=-1.915;QD=4.27;ReadPosRankSum=11.351;VQSLOD=-0.7351;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:66.37:234,0,66	1/1:2,0:2:5.25:23,5,0	0/0:15,0:8:20.79:0,21,184	0/0:14,0:12:18.18:0,18,196	0/1:7,1:8:9.19:44,0,9	0/0:21,0:21:45.43:0,45,559	0/0:16,0:16:45.06:0,45,677	0/0:26,0:26:57.08:0,57,672	0/1:19,1:20:32.70:106,0,33	0/0:15,0:15:36.44:0,36,427	0/0:14,0:14:35.96:0,36,439	0/0:14,0:14:38.64:0,39,442	0/0:11,0:11:27.07:0,27,384	0/0:11,0:11:27.06:0,27,361	0/1:14,1:15:39.69:100,0,40	0/1:16,0:16:34.88:35,0,50	0/1:30,0:30:53.07:125,0,53	0/1:34,2:36:57.25:189,0,57	0/1:18,1:19:79.09:79,0,116	0/1:8,2:10:15.19:61,0,15	0/1:32,0:32:54.19:139,0,54	0/0:13,0:13:29.93:0,30,323	0/0:6,0:6:11.87:0,12,116	0/0:25,0:25:75.11:0,75,1030	0/1:14,0:14:19.79:20,0,87	0/1:15,2:17:26.07:120,0,26	0/1:17,0:17:34.14:34,0,87	0/0:3,0:3:9.01:0,9,113
chr10	95769520	.	ACC	A	5006.69	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=4.738;DP=458;FS=28.519;HRun=11;HaplotypeScore=62.6778;InbreedingCoeff=0.9354;MQ=70.27;MQ0=1;MQRankSum=-0.703;QD=19.33;ReadPosRankSum=7.884;VQSLOD=1.2482;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,23:32:68.88:713,69,0	1/1:0,2:2:6.02:64,6,0	0/0:16,0:10:18.16:0,18,165	0/0:12,0:10:12.46:0,12,137	1/1:6,2:9:20.65:186,21,0	0/0:18,0:19:33:0,33,364	0/0:16,0:16:42.09:0,42,541	0/0:25,0:25:24.88:0,25,260	1/1:5,15:20:32.50:331,32,0	0/0:13,0:15:26.27:0,26,246	0/0:11,0:13:26.55:0,27,336	0/0:12,0:14:23.39:0,23,230	0/0:10,0:10:24.93:0,25,308	0/0:10,0:10:21.03:0,21,242	1/1:4,11:15:30.04:312,30,0	1/1:2,13:16:23.79:235,24,0	1/1:4,26:30:60.14:638,60,0	1/1:7,25:31:57.13:606,57,0	1/1:6,11:18:35.78:362,36,0	1/1:3,6:10:18.04:191,18,0	1/1:6,25:31:60.60:639,61,0	0/0:13,0:13:15.94:0,16,232	0/0:7,0:8:4.38:0,4,53	0/0:25,0:25:60.06:0,60,697	1/1:5,8:13:12.02:128,12,0	1/1:4,13:18:44.81:442,45,0	1/1:5,8:13:15.01:160,15,0	0/0:3,0:3:6.02:0,6,80
chr10	95770705	.	C	CT	7145.35	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-16.281;DP=584;FS=1.518;HRun=1;HaplotypeScore=81.7000;InbreedingCoeff=0.9985;MQ=91.17;MQ0=0;MQRankSum=-1.336;QD=38.83;ReadPosRankSum=3.445;VQSLOD=5.5358;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,123,1581	0/0:8,0:8:21.07:0,21,273	0/0:24,0:24:69.14:0,69,861	0/0:24,0:24:43.28:0,43,675	0/0:14,0:14:42.11:0,42,525	1/1:1,24:25:69.23:1034,69,0	1/1:0,18:18:45.15:675,45,0	0/0:31,0:31:90.29:0,90,1168	0/0:22,0:22:66.21:0,66,856	1/1:1,20:21:60.20:899,60,0	1/1:1,10:11:30.10:450,30,0	1/1:0,20:20:42.14:630,42,0	1/1:0,13:13:33.11:495,33,0	1/1:0,23:23:54.18:810,54,0	0/0:28,0:28:84.23:0,84,1047	0/0:23,0:23:63.20:0,63,817	0/0:18,0:18:51.17:0,51,662	0/0:10,0:10:30.10:0,30,384	0/0:23,0:23:60.18:0,60,749	0/0:12,0:12:30.10:0,30,389	0/0:48,0:48:99:0,138,1774	1/1:1,13:14:39.13:580,39,0	1/1:1,10:11:24.08:360,24,0	1/1:1,27:28:81.27:1214,81,0	0/0:11,0:11:33.11:0,33,428	0/0:22,1:23:24.24:0,24,812	0/0:17,0:16:51.17:0,51,658	0/0:17,0:17:48.13:0,48,605
chr10	95773323	.	C	CATA	12660.18	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-14.854;DP=680;FS=0.669;HRun=0;HaplotypeScore=136.2321;InbreedingCoeff=0.9843;MQ=83.23;MQ0=0;MQRankSum=-6.034;QD=59.72;ReadPosRankSum=4.124;VQSLOD=6.2184;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,2124	0/0:10,0:10:30.10:0,30,559	0/0:22,0:22:54.18:0,54,980	0/0:20,0:20:56.76:0,57,968	0/0:24,0:24:69.24:0,69,1286	1/1:0,21:24:60.21:1477,60,0	1/1:1,21:24:60.21:1478,60,0	0/0:37,0:37:99:0,105,1949	0/0:26,0:26:78.27:0,78,1452	1/1:2,19:22:63.21:1503,63,0	1/1:3,3:6:6.02:148,6,0	1/1:1,23:26:69.24:1699,69,0	1/1:2,19:22:57.15:1349,57,0	1/1:0,24:25:69.24:1694,69,0	0/0:30,0:30:90.31:0,90,1670	0/0:34,0:34:99:0,99,1838	0/0:32,0:32:81.25:0,81,1474	0/0:27,0:27:75.26:0,75,1397	0/0:14,0:14:42.13:0,42,752	0/0:25,0:25:72.23:0,72,1301	0/0:41,0:41:99:0,120,2175	1/1:1,24:25:51.18:1256,51,0	1/1:1,19:21:45:1096,45,0	1/1:4,13:17:39.13:960,39,0	0/0:22,0:22:66.23:0,66,1230	0/0:27,0:27:81.28:0,81,1509	0/0:24,0:24:72.25:0,72,1329	0/0:14,0:14:42.14:0,42,764
chr10	95773362	.	TTTC	T	2627.84	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.587;DP=664;FS=2.457;HRun=0;HaplotypeScore=164.3198;InbreedingCoeff=0.9983;MQ=79.48;MQ0=0;MQRankSum=-1.724;QD=36.50;ReadPosRankSum=2.986;VQSLOD=4.3870;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,2848	0/0:9,0:9:27.09:0,27,583	0/0:19,0:19:54.10:0,54,1069	0/0:19,0:18:47.95:0,48,891	0/0:25,0:25:72.25:0,72,1632	0/0:15,0:15:39.13:0,39,885	0/0:31,0:31:81.26:0,81,1699	0/0:21,0:21:51.17:0,51,1103	0/0:24,0:24:69.24:0,69,1535	0/0:21,0:21:57.18:0,57,1211	0/0:8,0:8:24.08:0,24,516	0/0:35,0:35:99:0,99,2222	0/0:15,0:15:41.92:0,42,948	0/0:29,0:29:81.28:0,81,1820	0/0:35,0:35:99:0,99,2226	0/0:31,0:31:93.32:0,93,2113	1/1:2,33:35:80.52:1349,81,0	1/1:1,36:37:84.24:1401,84,0	0/0:20,0:20:60.21:0,60,1345	0/0:16,0:16:48.16:0,48,1073	0/0:38,0:38:99:0,111,2466	0/0:19,0:19:57.20:0,57,1275	0/0:15,0:15:39.13:0,39,862	0/0:23,0:23:62.80:0,63,1341	0/0:21,0:21:63.22:0,63,1432	0/0:18,0:18:45.14:0,45,969	0/0:23,0:23:66.22:0,66,1428	0/0:17,0:17:48.16:0,48,1064
chr10	95773847	.	T	TGA	29462.80	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-7.658;DP=737;FS=2.431;HRun=0;HaplotypeScore=82.1751;InbreedingCoeff=0.9970;MQ=79.83;MQ0=4;MQRankSum=-5.304;QD=44.30;ReadPosRankSum=5.613;VQSLOD=6.3432;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,45:48:99:2130,123,0	1/1:0,7:7:18.06:311,18,0	0/0:16,0:16:30.06:0,30,377	0/0:24,0:24:54.15:0,54,693	1/1:3,31:35:96.33:1656,96,0	1/1:0,19:19:54.18:935,54,0	1/1:1,31:33:87.30:1507,87,0	0/0:23,0:23:54.16:0,54,693	1/1:3,25:30:72.25:1247,72,0	1/1:5,25:31:75.25:1274,75,0	1/1:2,17:19:48.16:831,48,0	1/1:3,30:33:78.27:1351,78,0	1/1:2,21:22:60.21:1038,60,0	1/1:2,20:21:48.16:831,48,0	1/1:1,29:30:81.28:1403,81,0	1/1:2,28:31:75.26:1299,75,0	1/1:0,47:47:99:2286,132,0	1/1:2,24:26:66.23:1143,66,0	1/1:6,17:24:60.18:985,60,0	1/1:3,25:28:69.24:1194,69,0	1/1:0,31:31:93.32:1611,93,0	1/1:3,16:18:39.13:675,39,0	1/1:0,18:18:54.18:935,54,0	1/1:4,32:37:93.32:1611,93,0	1/1:2,26:28:78.27:1350,78,0	1/1:3,22:25:69.21:1131,69,0	1/1:4,16:20:42.14:727,42,0	0/0:9,0:9:24.08:0,24,320
chr10	95774171	.	AACAAACAAACAT	A	13220.96	PASS	AB=0.667;AC=23;AF=0.411;AN=56;BaseQRankSum=10.585;DP=549;FS=13.325;HRun=0;HaplotypeScore=222.0219;InbreedingCoeff=0.9177;MQ=57.41;MQ0=2;MQRankSum=-13.688;QD=66.44;ReadPosRankSum=0.148;VQSLOD=3.0971;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,8:26:59.73:1253,60,0	1/1:2,3:5:14.98:423,15,0	0/0:20,0:17:42.15:0,42,1778	0/0:23,0:17:14.52:0,15,1453	1/1:10,10:20:45.03:1071,45,0	0/0:24,0:24:72.23:0,72,3890	0/0:25,0:25:69.16:0,69,3603	0/0:40,0:40:99:0,105,4954	1/1:11,11:22:59.96:1565,60,0	0/0:24,0:24:69.23:0,69,3522	0/0:25,0:25:69.21:0,69,3244	0/0:25,0:25:69.20:0,69,3408	0/0:11,0:11:27.08:0,27,1362	0/0:20,0:20:54.15:0,54,2678	1/1:8,17:25:72.02:2076,72,0	1/1:6,8:14:41.87:1036,42,0	0/0:30,0:30:84.17:0,84,3913	0/0:30,0:30:87.23:0,87,4539	1/1:6,6:11:32.94:772,33,0	1/1:5,8:13:39.05:1202,39,0	1/1:7,3:10:17.86:327,18,0	0/0:18,0:18:54.17:0,54,2570	0/0:18,0:18:48.15:0,48,2638	0/0:11,0:11:30.09:0,30,1680	1/1:7,7:14:38.91:1046,39,0	0/1:10,10:20:99:1458,0,308	1/1:12,6:18:50.89:991,51,0	0/0:5,0:5:15.05:0,15,858
chr10	95774193	.	T	TA	4746.92	PASS	AB=0.581;AC=23;AF=0.411;AN=56;BaseQRankSum=14.155;DP=513;FS=6.423;HRun=8;HaplotypeScore=146.1975;InbreedingCoeff=0.9547;MQ=72.62;MQ0=1;MQRankSum=-12.264;QD=25.80;ReadPosRankSum=-2.020;VQSLOD=2.7977;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:45.08:473,45,0	1/1:1,4:5:14.75:133,15,0	0/0:28,0:26:49.80:0,50,503	0/0:20,0:19:31:0,31,281	1/1:7,13:20:38.10:379,38,0	0/0:31,0:31:80.98:0,81,733	0/0:25,0:25:62.99:0,63,569	0/0:30,0:30:71.82:0,72,644	1/1:1,20:21:63.03:677,63,0	0/0:24,0:24:54.02:0,54,494	0/0:23,0:23:50.50:0,50,444	0/0:23,0:23:57.03:0,57,521	0/0:10,0:10:27.01:0,27,247	0/0:16,0:16:45.02:0,45,412	1/1:0,22:22:63.14:666,63,0	1/1:0,10:10:30.08:327,30,0	0/0:23,0:23:66.01:0,66,597	0/0:25,0:25:63.02:0,63,576	1/1:2,12:13:33.09:372,33,0	1/1:2,9:11:27.13:261,27,0	1/1:1,10:11:16.60:178,17,0	0/0:15,0:15:42.01:0,42,379	0/0:16,0:16:33:0,33,302	0/0:11,0:11:30.02:0,30,275	1/1:5,9:14:35.93:337,36,0	0/1:5,13:18:0.83:463,0,1	1/1:2,16:17:45.04:481,45,0	0/0:7,0:7:21.01:0,21,192
chr10	95774558	.	T	TCGCCACAGG	54449.66	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=8.160;DP=673;FS=0.979;HRun=0;HaplotypeScore=259.2074;InbreedingCoeff=0.8871;MQ=58.00;MQ0=0;MQRankSum=-11.954;QD=89.85;ReadPosRankSum=5.668;VQSLOD=4.5317;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:40:51.78:3534,52,0	1/1:16,0:16:40.03:1239,40,0	0/0:13,0:13:33.11:0,33,1037	0/0:12,0:12:24.89:0,25,725	1/1:19,0:19:25.16:1656,25,0	1/1:15,0:15:41.81:1324,42,0	1/1:29,0:29:78.01:2591,78,0	0/0:34,0:34:96.29:0,96,2625	1/1:44,0:44:99:4521,104,0	1/1:25,0:25:43.84:2059,44,0	1/1:19,0:19:57.20:2030,57,0	1/1:30,0:30:80.97:2572,81,0	1/1:32,0:32:80.76:2636,81,0	1/1:29,0:29:84:2717,84,0	1/1:35,0:35:72.82:3072,73,0	1/1:41,0:41:99:4610,121,0	1/1:28,0:28:43.31:2250,43,0	1/1:15,0:15:42.06:1269,42,0	1/1:27,0:27:66.58:2363,67,0	1/1:16,0:16:39.07:1450,39,0	1/1:15,0:15:1.96:830,2,0	1/1:25,0:25:65.71:2213,66,0	1/1:23,0:23:69.21:2237,69,0	1/1:22,0:22:53.88:1637,54,0	1/1:11,0:11:1.07:768,1,0	1/1:21,1:30:89.91:2976,90,0	1/1:20,0:20:56.04:1895,56,0	0/0:8,0:8:24.08:0,24,735
chr10	95774559	.	T	TG	9769.56	PASS	AB=0.621;AC=32;AF=0.571;AN=56;BaseQRankSum=15.431;DP=582;FS=1.539;HRun=0;HaplotypeScore=267.5167;InbreedingCoeff=-0.1644;MQ=61.20;MQ0=0;MQRankSum=-12.563;QD=18.93;ReadPosRankSum=11.966;VQSLOD=3.2440;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,25:32:68.82:557,0,69	0/1:10,6:16:74.67:179,0,75	0/0:13,0:13:33.11:0,33,456	0/0:12,0:12:32.72:0,33,374	1/1:1,10:11:22.82:195,23,0	1/1:3,11:14:21.64:381,22,0	1/1:5,15:20:34.61:487,35,0	0/0:33,0:33:93.30:0,93,1286	0/1:12,25:37:46.43:679,0,46	1/1:0,20:23:44.59:598,45,0	1/1:0,16:16:45.78:389,46,0	1/1:1,27:28:52.06:710,52,0	0/1:6,22:28:8.88:545,0,9	1/1:6,21:27:20.18:666,20,0	0/1:11,18:29:81.52:591,0,82	0/1:11,27:38:54.55:730,0,55	0/1:8,14:22:56.42:315,0,56	0/1:8,6:14:99:145,0,151	0/1:13,8:21:99:221,0,223	0/1:6,8:14:59.06:193,0,59	0/1:6,6:12:7.89:106,0,8	0/1:4,19:23:7.27:474,0,7	1/1:2,17:19:2.56:386,3,0	0/1:4,18:22:27.45:389,0,27	0/1:4,5:9:38.10:145,0,38	0/1:10,15:25:99:390,0,139	0/1:5,11:16:21.09:298,0,21	0/0:8,0:8:24.08:0,24,336
chr10	95774560	.	C	CCACAGGTT	48628.66	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=9.126;DP=631;FS=1.641;HRun=0;HaplotypeScore=235.1383;InbreedingCoeff=0.9978;MQ=58.53;MQ0=0;MQRankSum=-11.397;QD=86.22;ReadPosRankSum=4.056;VQSLOD=5.2270;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:30:84.29:3052,84,0	1/1:9,6:15:42.14:1297,42,0	0/0:12,0:12:33.11:0,33,911	0/0:12,0:12:23.07:0,23,631	1/1:0,10:10:30.10:1086,30,0	1/1:8,0:19:54.15:1489,54,0	1/1:14,0:29:78.20:2181,78,0	0/0:35,0:35:96.31:0,96,2478	1/1:15,24:39:99:3738,108,0	1/1:10,0:29:83.87:2434,84,0	1/1:3,0:18:51.18:1624,51,0	1/1:10,0:32:89.71:2661,90,0	1/1:10,0:31:90.27:2521,90,0	1/1:14,0:34:99:2705,99,0	1/1:11,18:29:75.23:2488,75,0	1/1:11,27:38:99:4024,111,0	1/1:9,14:23:60.11:1768,60,0	1/1:9,6:15:45.12:1360,45,0	1/1:14,8:22:54.48:1649,54,0	1/1:6,7:14:42.05:1321,42,0	1/1:8,6:14:29.94:751,30,0	1/1:11,0:29:84.22:2334,84,0	1/1:4,0:21:63.22:1957,63,0	1/1:5,0:23:57.16:1554,57,0	1/1:4,5:9:24.08:798,24,0	1/1:10,15:25:75.24:2325,75,0	1/1:6,10:16:45.15:1513,45,0	0/0:8,0:8:24.08:0,24,690
chr10	95774777	.	T	TG	14596.04	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-7.476;DP=726;FS=1.202;HRun=0;HaplotypeScore=74.6503;InbreedingCoeff=0.9998;MQ=82.45;MQ0=0;MQRankSum=-3.062;QD=43.06;ReadPosRankSum=2.090;VQSLOD=5.4502;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:93.32:1486,93,0	1/1:1,11:12:30.10:478,30,0	0/0:31,0:31:84.25:0,84,1149	0/0:13,0:13:39.09:0,39,508	1/1:1,16:17:42.14:670,42,0	0/0:18,0:18:54.18:0,54,755	0/0:34,0:34:99:0,102,1380	0/0:30,0:30:81.27:0,81,1132	1/1:1,26:27:72.25:1150,72,0	0/0:31,0:31:87.29:0,87,1217	0/0:11,0:11:33.11:0,33,461	0/0:35,0:35:99:0,102,1403	0/0:25,0:25:72.20:0,72,984	0/0:27,0:27:75.25:0,75,1038	1/1:1,29:30:72.25:1151,72,0	1/1:1,30:31:90.31:1427,90,0	0/0:27,0:27:78.25:0,78,1074	0/0:25,0:24:75.23:0,75,1031	1/1:0,23:23:69.16:1022,69,0	1/1:0,15:15:39.13:624,39,0	1/1:1,63:64:99:2734,172,0	0/0:21,0:21:60.20:0,60,839	0/0:13,0:13:39.12:0,39,528	0/0:34,0:34:99:0,102,1386	1/1:0,27:27:81.28:1295,81,0	1/1:1,32:33:57.34:1458,57,0	1/1:2,23:25:69.24:1101,69,0	0/0:12,0:12:36.12:0,36,501
chr10	95777232	.	GGT	G	1239.48	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=18.100;DP=680;FS=7.155;HRun=0;HaplotypeScore=122.4585;InbreedingCoeff=0.9987;MQ=75.15;MQ0=0;MQRankSum=-1.314;QD=5.69;ReadPosRankSum=4.429;VQSLOD=2.0713;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1899	0/0:8,0:8:24.07:0,24,402	0/0:33,0:32:80.36:0,80,1278	0/0:29,0:26:46.04:0,46,848	0/0:24,0:24:69.20:0,69,1148	1/1:19,1:20:42.80:144,43,0	1/1:25,1:26:48.97:194,49,0	0/0:27,0:27:81.25:0,81,1316	0/0:38,0:38:99:0,111,1917	1/1:18,1:19:40.57:169,41,0	1/1:19,0:19:31.23:103,31,0	1/1:25,0:25:44.24:145,44,0	1/1:18,0:18:29.24:97,29,0	1/1:18,0:18:32:106,32,0	0/0:27,0:27:81.25:0,81,1396	0/0:23,0:23:69.23:0,69,1187	0/0:22,0:22:24.68:0,25,310	0/0:17,0:17:22.07:0,22,176	0/0:33,0:33:96.07:0,96,1604	0/0:19,0:19:57.15:0,57,942	0/0:36,0:36:99:0,102,1677	1/1:27,1:28:55.23:214,55,0	1/1:18,0:18:35.32:115,35,0	1/1:27,0:27:53.28:174,53,0	0/0:31,0:31:93.29:0,93,1570	0/0:20,0:20:60.16:0,60,974	0/0:19,0:19:57.19:0,57,999	0/0:18,0:18:54.19:0,54,970
chr10	95777233	.	GT	G	7848.95	PASS	AB=0.971;AC=22;AF=0.393;AN=56;BaseQRankSum=14.417;DP=668;FS=9.855;HRun=1;HaplotypeScore=83.0159;InbreedingCoeff=0.8600;MQ=75.19;MQ0=0;MQRankSum=-1.049;QD=31.02;ReadPosRankSum=3.636;VQSLOD=3.6142;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1509	0/0:8,0:8:24.07:0,24,323	0/0:31,0:30:79.91:0,80,1032	0/0:26,1:24:39.94:0,40,677	0/0:23,0:23:69.07:0,69,915	1/1:1,19:20:57.19:793,57,0	1/1:1,25:26:66.15:893,66,0	0/0:27,0:27:81.22:0,81,1061	0/0:37,0:37:99:0,111,1501	1/1:1,17:18:54.11:730,54,0	1/1:0,17:17:42.14:586,42,0	1/1:0,25:25:60.06:837,60,0	1/1:0,17:17:39.13:544,39,0	1/1:1,17:18:48.07:644,48,0	0/0:27,0:27:81.25:0,81,1120	0/0:23,0:23:69.13:0,69,936	0/1:23,0:23:11.80:12,0,59	0/1:15,1:16:11.12:118,0,11	0/0:33,0:33:96.06:0,96,1285	0/0:19,0:19:57.14:0,57,762	0/0:35,0:35:99:0,102,1342	1/1:1,27:28:75.18:1018,75,0	1/1:0,18:18:48.16:669,48,0	1/1:0,27:27:72.24:1005,72,0	0/0:31,0:31:93.25:0,93,1247	0/0:21,0:21:60.14:0,60,789	0/0:19,0:19:57.19:0,57,798	0/0:18,0:18:54.18:0,54,770
chr10	95778067	.	TG	T	5350.50	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=12.832;DP=454;FS=0.384;HRun=7;HaplotypeScore=70.3486;InbreedingCoeff=0.9721;MQ=79.32;MQ0=2;MQRankSum=-0.198;QD=22.77;ReadPosRankSum=2.031;VQSLOD=4.8802;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,24:30:72.16:734,72,0	1/1:0,5:5:15.03:151,15,0	0/0:14,0:14:7.48:0,7,197	0/0:19,0:19:26.54:0,27,304	1/1:0,10:10:21.05:214,21,0	0/0:13,0:13:30.95:0,31,362	0/0:16,0:16:42.12:0,42,514	0/0:17,0:17:51.16:0,51,641	1/1:6,13:19:48.10:485,48,0	0/0:15,0:15:36.11:0,36,442	0/0:5,0:5:15.05:0,15,189	0/0:18,0:18:48.15:0,48,604	0/0:13,0:13:39.12:0,39,490	0/0:12,0:12:33.10:0,33,410	1/1:4,27:31:75.16:765,75,0	1/1:5,17:22:51.10:518,51,0	0/0:19,0:19:39.11:0,39,478	0/0:16,0:16:48.15:0,48,604	1/1:9,10:19:32.88:335,33,0	1/1:6,7:13:21.04:213,21,0	1/1:6,34:40:71.23:896,71,0	0/0:11,0:11:30.08:0,30,362	0/0:15,0:15:39.60:0,40,486	0/0:5,0:5:15.04:0,15,177	1/1:5,3:8:9.01:92,9,0	1/1:3,15:18:45.10:459,45,0	1/1:5,14:19:48.10:489,48,0	0/0:8,0:8:21.07:0,21,264
chr10	95778074	.	GT	G	1125.76	PASS	AB=0.958;AC=17;AF=0.304;AN=56;BaseQRankSum=14.912;DP=448;FS=1.638;HRun=1;HaplotypeScore=80.8707;InbreedingCoeff=0.4049;MQ=78.99;MQ0=1;MQRankSum=-0.815;QD=5.03;ReadPosRankSum=5.596;VQSLOD=0.7010;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:11.72:141,12,0	1/1:5,0:5:10.53:33,11,0	0/0:16,0:15:32.90:0,33,335	0/0:20,0:18:41.37:0,41,432	1/1:10,0:10:14.78:42,15,0	0/0:12,0:12:31.83:0,32,413	0/0:15,0:15:44.98:0,45,584	0/0:25,0:25:75.18:0,75,932	0/1:18,2:20:31.88:214,0,32	0/0:14,0:14:39.55:0,40,498	0/0:6,0:6:15.05:0,15,214	0/0:18,0:18:51.61:0,52,619	0/0:13,0:13:39.13:0,39,525	0/0:11,0:11:32.47:0,32,428	0/1:35,1:36:99:143,0,114	0/1:20,1:21:17.81:138,0,18	0/0:16,0:16:47.99:0,48,570	0/0:17,0:17:51.14:0,51,700	0/1:13,1:14:20.41:73,0,20	0/1:14,1:15:80.90:81,0,89	1/1:35,0:35:64.56:197,65,0	0/0:11,0:11:33.09:0,33,438	0/0:15,0:15:42.24:0,42,498	0/0:8,0:8:20.97:0,21,237	0/1:6,0:6:5.39:5,0,56	0/1:17,0:17:22.43:39,0,22	1/1:15,3:18:40.37:204,40,0	0/0:7,0:7:21.07:0,21,299
chr10	95778231	.	C	CG	3109.25	PASS	AB=0.688;AC=15;AF=0.268;AN=56;BaseQRankSum=12.855;DP=732;FS=16.367;HRun=0;HaplotypeScore=219.2044;InbreedingCoeff=0.1512;MQ=62.77;MQ0=0;MQRankSum=-5.854;QD=9.06;ReadPosRankSum=6.904;VQSLOD=2.0275;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,21:50:49.37:434,0,49	0/1:9,6:15:48.45:96,0,48	0/0:29,0:29:87.14:0,87,1162	0/0:30,0:30:81.09:0,81,1077	0/1:9,12:21:51.22:155,0,51	0/0:22,0:22:19.41:0,19,262	0/0:27,0:27:58.44:0,58,382	0/0:37,0:37:99:0,111,1522	1/1:6,25:31:30.39:436,30,0	0/0:23,0:23:60.03:0,60,401	0/0:11,0:11:20.40:0,20,129	0/0:26,0:26:47.16:0,47,317	0/0:22,0:22:50.13:0,50,348	0/0:29,0:29:50.37:0,50,350	0/1:20,20:40:68:389,0,68	0/1:16,17:33:47.21:354,0,47	0/0:43,0:43:78.34:0,78,607	0/0:18,0:18:49.95:0,50,323	0/1:22,9:31:99:201,0,126	0/1:10,17:27:29.29:297,0,29	0/1:19,7:26:43.48:135,0,43	0/0:22,0:22:27.37:0,27,331	0/0:16,0:16:29.20:0,29,183	0/0:24,0:24:41.55:0,42,294	1/1:9,12:21:5.51:217,6,0	0/1:9,12:21:26.99:150,0,27	1/1:8,19:27:26.50:417,26,0	0/0:9,0:9:27.09:0,27,377
chr10	95778232	.	A	ACG	5984.24	PASS	AB=0.700;AC=16;AF=0.286;AN=56;BaseQRankSum=10.433;DP=754;FS=20.149;HRun=0;HaplotypeScore=230.2073;InbreedingCoeff=0.3715;MQ=63.96;MQ0=0;MQRankSum=-6.291;QD=17.10;ReadPosRankSum=5.761;VQSLOD=2.9125;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,21:50:79.69:650,0,80	0/1:9,6:15:10.37:205,0,10	0/0:31,0:31:86.95:0,87,1346	0/0:30,0:29:74.63:0,75,1195	0/1:9,12:21:15.02:307,0,15	0/0:22,0:22:44.82:0,45,377	0/0:29,0:29:59.64:0,60,486	0/0:36,0:36:99:0,108,1739	1/1:7,25:32:37.03:748,37,0	0/0:23,0:23:48.54:0,49,475	0/0:13,0:13:20.86:0,21,164	0/0:29,0:29:47.84:0,48,401	0/0:23,0:23:50.83:0,51,431	0/0:31,0:31:50.92:0,51,438	0/1:21,20:41:6.96:781,0,7	0/1:16,17:33:12.99:638,0,13	0/0:44,0:44:83.54:0,84,792	0/0:21,0:21:33.78:0,34,386	0/1:22,9:31:99:340,0,108	1/1:11,17:28:13.23:607,13,0	0/1:22,7:29:34.34:280,0,34	0/0:22,0:22:50.91:0,51,446	0/0:15,0:15:29.82:0,30,236	0/0:26,0:26:47.78:0,48,398	1/1:10,12:22:13.34:367,13,0	0/1:9,12:21:1.50:382,0,2	1/1:8,19:27:40.88:678,41,0	0/0:9,0:9:27.09:0,27,440
chr10	95778274	.	GACAA	G	9490.06	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=2.128;DP=726;FS=1.404;HRun=0;HaplotypeScore=214.3992;InbreedingCoeff=0.9957;MQ=67.58;MQ0=1;MQRankSum=-13.347;QD=32.95;ReadPosRankSum=2.953;VQSLOD=4.7936;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,3223	0/0:10,0:10:27.06:0,27,633	0/0:35,0:31:83.35:0,83,1511	0/0:37,0:35:95.31:0,95,1771	0/0:21,0:21:54:0,54,1070	1/1:0,26:26:57.20:1054,57,0	1/1:13,21:34:65.77:1072,66,0	0/0:43,0:43:99:0,126,2609	0/0:29,0:29:81.14:0,81,1749	1/1:2,23:25:62.77:1018,63,0	1/1:1,17:18:29.68:554,30,0	1/1:2,25:27:42.14:789,42,0	1/1:0,17:17:39.13:731,39,0	1/1:1,27:28:57.20:1067,57,0	0/0:39,0:39:99:0,117,2798	0/0:33,0:33:99:0,99,2306	1/1:19,19:38:80.98:1206,81,0	1/1:12,11:22:50.66:698,51,0	0/0:24,0:24:72.16:0,72,1467	0/0:21,0:21:63:0,63,1318	0/0:26,0:26:63.09:0,63,1359	1/1:0,19:19:33.11:623,33,0	1/1:2,11:13:21.07:396,21,0	1/1:2,18:20:14.77:283,15,0	0/0:16,0:16:48.02:0,48,1005	0/0:19,0:19:51.16:0,51,1243	0/0:28,0:28:78.19:0,78,1677	0/0:9,0:9:18.04:0,18,427
chr10	95778331	.	T	TG	1225.62	PASS	AB=0.799;AC=16;AF=0.286;AN=56;BaseQRankSum=-4.103;DP=606;FS=6.633;HRun=10;HaplotypeScore=123.8911;InbreedingCoeff=0.3604;MQ=69.33;MQ0=1;MQRankSum=0.923;QD=5.75;ReadPosRankSum=-0.968;VQSLOD=1.2724;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:45:49.84:0,50,387	0/1:3,2:5:15.62:55,0,16	0/1:31,0:20:34.94:35,0,122	0/0:20,0:16:17.91:0,18,155	1/1:11,6:17:5.69:43,6,0	0/0:38,0:38:73.20:0,73,567	0/0:30,0:31:81.83:0,82,631	0/0:28,0:29:41.72:0,42,319	1/1:18,9:27:0.47:326,0,0	0/0:15,0:16:22.88:0,23,168	0/0:14,0:15:11.93:0,12,98	0/0:25,0:25:32.84:0,33,260	0/0:18,0:18:35.93:0,36,292	0/0:30,0:31:52.78:0,53,413	0/1:13,17:31:25.90:362,0,26	1/1:12,6:19:12.03:128,12,0	0/0:3,0:24:34.62:0,35,102	0/0:4,0:24:37.55:0,38,110	0/0:14,0:14:2.20:0,2,7	0/1:11,2:13:9.64:88,0,10	0/1:12,7:20:26.76:81,0,27	0/0:15,0:15:26.17:0,26,200	0/0:20,0:20:18.99:0,19,207	0/0:16,0:16:23.91:0,24,191	1/1:5,5:10:6.02:64,6,0	0/1:16,3:19:23.03:23,0,37	1/1:12,8:20:18.05:192,18,0	0/0:10,0:11:25.96:0,26,198
chr10	95779027	.	A	AG	2251.13	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-11.981;DP=651;FS=1.704;HRun=3;HaplotypeScore=111.3262;InbreedingCoeff=0.9990;MQ=85.80;MQ0=0;MQRankSum=-1.437;QD=36.90;ReadPosRankSum=2.826;VQSLOD=3.2156;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,1570	0/0:12,0:12:30.09:0,30,359	0/0:20,0:20:48.15:0,48,575	0/0:24,0:24:57.16:0,57,667	0/0:12,0:12:27.08:0,27,324	0/0:23,0:23:57.16:0,57,673	0/0:24,0:24:66.20:0,66,791	0/0:23,0:23:60.13:0,60,694	0/0:32,0:32:87.24:0,87,1028	0/0:17,0:17:42.13:0,42,504	0/0:18,0:18:54.17:0,54,648	0/0:26,0:26:69.17:0,69,802	0/0:22,0:22:57.17:0,57,683	0/0:22,0:22:63.19:0,63,756	0/0:36,0:36:90.27:0,90,1079	0/0:34,0:34:87.25:0,87,1032	1/1:1,37:38:99:1453,105,0	1/1:0,23:23:66.22:919,66,0	0/0:17,0:17:48.10:0,48,558	0/0:18,0:18:51.16:0,51,612	0/0:33,0:33:90.26:0,90,1067	0/0:12,0:12:36.11:0,36,432	0/0:18,0:18:51.16:0,51,612	0/0:31,0:30:87.27:0,87,1044	0/0:15,0:14:45.14:0,45,540	0/0:21,0:21:60.18:0,60,720	0/0:25,0:25:66.20:0,66,792	0/0:11,0:11:33.10:0,33,396
chr10	95779649	.	C	CT	2239.20	PASS	AB=0.812;AC=25;AF=0.446;AN=56;BaseQRankSum=-0.107;DP=489;FS=3.772;HRun=12;HaplotypeScore=61.7903;InbreedingCoeff=0.4267;MQ=58.63;MQ0=2;MQRankSum=-0.623;QD=9.53;ReadPosRankSum=0.587;VQSLOD=2.8292;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:31:26.21:186,26,0	0/0:13,0:13:35.75:0,36,261	0/1:10,0:7:3.40:3,0,23	0/0:11,0:6:13.93:0,14,92	0/0:26,1:30:25.22:0,25,386	1/1:5,11:17:10.72:238,11,0	1/1:2,13:16:1.96:167,2,0	0/0:37,0:36:39.36:0,39,450	0/0:13,0:13:35.77:0,36,262	1/1:4,8:12:24.04:233,24,0	1/1:3,2:5:3:29,3,0	1/1:2,17:19:19.20:364,19,0	1/1:4,13:15:5.13:212,5,0	1/1:2,14:16:33:311,33,0	0/0:14,1:16:14.60:0,15,261	0/0:20,0:22:25.15:0,25,306	0/0:26,1:27:35.04:0,35,422	0/0:24,2:29:7.09:0,7,352	0/1:19,1:20:20.35:20,0,197	0/0:16,1:17:0.60:0,1,167	0/1:3,1:4:20.23:20,0,35	0/1:3,5:8:12.85:49,0,13	0/1:2,5:7:6.92:92,0,7	1/1:1,21:23:47.24:490,47,0	0/0:22,1:23:26.69:0,27,362	0/1:15,1:16:8.35:8,0,110	0/0:15,0:15:9.85:0,10,233	0/1:8,2:10:3.72:4,0,124
chr10	95779870	.	A	AAAAATAAAATAAAATAAAAT	8628.28	PASS	AC=20;AF=0.385;AN=52;BaseQRankSum=-7.382;DP=369;FS=5.030;HRun=0;HaplotypeScore=192.1899;InbreedingCoeff=0.8447;MQ=57.40;MQ0=6;MQRankSum=-8.366;QD=79.89;ReadPosRankSum=-5.394;VQSLOD=3.5065;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:9:3.67:0,4,42	0/0:4,0:4:6.02:0,6,304	0/0:17,0:11:10.58:0,11,263	0/0:24,0:17:15.89:0,16,230	0/0:20,0:20:29.93:0,30,1405	1/1:11,3:14:27.05:2001,27,0	./.	1/1:33,0:31:51.16:1423,51,0	0/0:13,0:13:24.08:0,24,1276	1/1:14,0:14:18.06:1339,18,0	1/1:9,0:9:12.04:674,12,0	1/1:6,0:6:6.02:393,6,0	1/1:8,1:8:6.02:558,6,0	1/1:8,0:8:15.04:964,15,0	0/0:12,0:12:6.02:0,6,320	0/0:11,0:11:12.04:0,12,483	0/0:18,0:18:36.12:0,36,1821	0/0:20,0:20:24.08:0,24,1042	0/0:11,0:11:21.05:0,21,963	0/0:10,0:10:24.08:0,24,1041	0/0:23,0:23:30.10:0,30,1457	1/1:4,0:3:6.02:349,6,0	./.	1/1:7,0:7:9.03:543,9,0	0/0:16,0:16:27.09:0,27,1024	0/0:15,0:14:30.10:0,30,1386	0/0:30,0:28:51.17:0,51,2352	1/1:4,0:3:6.02:384,6,0
chr10	95779936	.	TGAAG	T	6994.56	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-1.328;DP=529;FS=0.991;HRun=0;HaplotypeScore=121.4595;InbreedingCoeff=0.9292;MQ=52.48;MQ0=7;MQRankSum=5.638;QD=31.37;ReadPosRankSum=5.994;VQSLOD=4.8895;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:57.61:0,58,533	1/1:2,4:6:15.03:223,15,0	0/0:18,0:13:6:0,6,55	0/0:18,0:14:18.04:0,18,245	1/1:6,25:31:72:1021,72,0	0/0:5,0:20:17.97:0,18,253	0/0:17,0:17:32.78:0,33,353	0/0:31,0:27:44.96:0,45,439	1/1:4,13:17:27.09:444,27,0	0/0:8,0:16:27.51:0,28,304	0/0:13,0:13:36.09:0,36,424	0/0:1,0:15:9.03:0,9,158	0/0:2,0:22:9.03:0,9,158	0/0:5,0:24:5.99:0,6,75	1/1:1,14:15:30.10:497,30,0	1/1:4,9:13:33.07:494,33,0	0/0:21,0:21:36.17:0,36,822	0/0:16,0:16:14.15:0,14,560	1/1:17,4:20:27.02:345,27,0	1/1:2,12:14:36.12:596,36,0	1/1:3,29:32:48.16:795,48,0	0/0:2,0:13:8.95:0,9,122	0/0:11,0:10:27.06:0,27,300	0/0:9,0:9:9:0,9,85	1/1:2,26:28:66.23:1094,66,0	1/1:6,18:24:60.19:937,60,0	1/1:6,16:22:33.11:547,33,0	0/0:18,0:18:51.01:0,51,720
chr10	95779959	.	A	AG	529.42	PASS	AB=0.886;AC=12;AF=0.214;AN=56;BaseQRankSum=3.835;DP=531;FS=5.192;HRun=1;HaplotypeScore=125.3399;InbreedingCoeff=-0.0873;MQ=61.17;MQ0=5;MQRankSum=-9.173;QD=3.10;ReadPosRankSum=-1.525;VQSLOD=-0.5333;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,4:31:85.39:85,0,722	0/0:7,0:7:17.72:0,18,143	0/0:11,0:7:21.07:0,21,272	0/0:17,0:16:42.11:0,42,514	0/0:30,0:30:79.53:0,80,601	0/1:12,0:12:18.15:18,0,77	0/1:15,5:20:36.01:36,0,469	0/0:36,4:36:24:0,24,1049	0/0:15,0:15:32.39:0,32,236	0/1:9,0:9:62.39:62,0,190	0/1:7,7:14:99:266,0,191	1/1:9,0:9:5.45:15,5,0	0/1:17,0:17:6.77:7,0,64	0/1:14,0:14:22.81:23,0,210	0/0:19,0:19:44.29:0,44,366	0/0:15,0:15:44.38:0,44,382	0/0:24,0:24:69.22:0,69,894	0/0:22,0:22:66.17:0,66,829	0/0:19,0:18:47.32:0,47,474	0/0:17,0:17:47.04:0,47,327	0/0:40,0:40:73.85:0,74,594	0/0:11,0:11:8.46:0,8,172	0/1:9,5:13:99:101,0,275	0/1:12,2:14:3.35:3,0,346	0/0:28,0:28:70.36:0,70,455	0/0:27,0:27:79.78:0,80,652	0/0:18,0:17:38.17:0,38,266	0/1:15,2:17:59.36:59,0,437
chr10	95780659	.	AT	A	4274.45	PASS	AB=0.942;AC=37;AF=0.661;AN=56;BaseQRankSum=-13.184;DP=340;FS=0.930;HRun=3;HaplotypeScore=53.1239;InbreedingCoeff=0.0576;MQ=61.96;MQ0=7;MQRankSum=-0.592;QD=14.20;ReadPosRankSum=-4.069;VQSLOD=2.5637;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:2:5.92:39,6,0	0/1:8,2:10:22.93:77,0,23	0/0:11,0:5:2.12:0,2,38	0/0:8,0:2:2.99:0,3,24	0/1:18,2:20:37.08:129,0,37	1/1:1,13:14:36.11:444,36,0	1/1:1,8:9:7.20:175,7,0	1/1:3,27:28:78.16:898,78,0	0/1:10,0:10:17.45:35,0,17	1/1:0,18:18:54.16:658,54,0	1/1:1,7:8:17.93:185,18,0	1/1:1,11:12:24.05:282,24,0	1/1:0,7:7:15.05:185,15,0	1/1:1,8:9:21.07:259,21,0	0/1:15,1:17:51.73:52,0,54	0/1:11,1:12:35.37:36,0,35	0/1:20,0:20:4.33:4,0,78	0/1:24,0:24:56.89:57,0,67	0/1:14,1:15:2.38:119,0,2	0/1:13,0:13:21.48:21,0,55	0/0:6,0:6:10.11:0,10,30	1/1:0,3:3:9.03:109,9,0	1/1:0,5:5:12.04:147,12,0	1/1:0,7:7:12.04:148,12,0	0/1:14,1:15:11.80:12,0,38	0/1:11,1:12:22.33:56,0,22	0/0:14,0:14:23.86:0,24,75	1/1:1,6:7:12.04:147,12,0
chr10	95780854	.	T	TA	286.34	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.537;DP=444;FS=12.864;HRun=9;HaplotypeScore=44.7771;InbreedingCoeff=0.7229;MQ=64.68;MQ0=0;MQRankSum=-0.016;QD=15.07;ReadPosRankSum=0.602;VQSLOD=2.0060;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,15:18:16.67:376,17,0	0/0:12,0:12:32.99:0,33,286	0/0:14,0:14:14.98:0,15,130	0/0:5,0:5:8.74:0,9,64	0/0:14,0:14:32.98:0,33,286	0/0:28,0:28:77.97:0,78,677	0/0:4,0:4:12:0,12,104	0/0:34,0:34:80.95:0,81,699	0/0:10,0:10:29.99:0,30,260	0/0:18,0:18:41.94:0,42,358	0/0:19,0:19:50.97:0,51,443	0/0:23,0:23:62.98:0,63,547	0/0:13,0:13:35.99:0,36,312	0/0:12,0:12:32.98:0,33,286	0/0:16,0:16:44.99:0,45,391	0/0:16,1:17:11.78:0,12,326	0/0:21,0:23:55.06:0,55,455	0/0:21,0:21:56.99:0,57,495	0/0:22,0:22:47.98:0,48,417	0/0:19,1:20:23.81:0,24,435	0/0:4,0:4:12:0,12,104	0/0:2,0:2:3:0,3,26	0/0:8,0:8:24:0,24,208	0/0:7,0:7:21:0,21,182	0/0:21,0:21:59.94:0,60,514	0/0:20,0:20:56.98:0,57,492	0/0:25,0:25:62.98:0,63,547	0/0:12,0:13:38.03:0,38,319
chr10	95781025	.	G	GGGA	12393.92	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-14.511;DP=603;FS=2.374;HRun=0;HaplotypeScore=77.5345;InbreedingCoeff=0.9964;MQ=79.70;MQ0=0;MQRankSum=-5.500;QD=48.04;ReadPosRankSum=1.049;VQSLOD=6.9486;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,114,1820	0/0:10,0:10:27.08:0,27,405	0/0:11,0:11:33.11:0,33,507	0/0:21,0:21:50.65:0,51,668	0/0:23,0:23:63.22:0,63,1018	1/1:2,26:28:66.23:1459,66,0	1/1:1,20:22:42.14:928,42,0	1/1:6,25:31:75.24:1580,75,0	0/0:13,0:13:36.12:0,36,580	1/1:4,19:23:60.20:1281,60,0	1/1:5,14:19:30.10:663,30,0	1/1:3,25:28:72.25:1590,72,0	1/1:3,14:18:33.11:730,33,0	1/1:3,14:17:39.13:856,39,0	0/0:25,0:25:69.24:0,69,1116	0/0:20,0:20:60.19:0,60,947	0/0:21,0:21:63.20:0,63,984	0/0:18,0:18:51.17:0,51,814	0/0:20,0:20:48.12:0,48,714	0/0:17,0:17:44.74:0,45,689	0/0:45,0:45:99:0,120,1868	1/1:4,15:19:39.13:862,39,0	1/1:3,13:17:32.67:725,33,0	1/1:0,28:29:60.68:1323,61,0	0/0:11,0:11:30.10:0,30,485	0/0:21,0:21:15.31:0,15,786	0/0:26,0:25:72.21:0,72,1082	1/1:1,6:7:18.06:398,18,0
chr10	95781722	.	A	AG	1373.85	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.539;DP=601;FS=9.641;HRun=2;HaplotypeScore=66.4763;InbreedingCoeff=0.9524;MQ=77.51;MQ0=0;MQRankSum=-2.806;QD=34.35;ReadPosRankSum=1.282;VQSLOD=3.5293;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,38:40:99:1469,102,0	0/0:13,0:13:39.12:0,39,483	0/0:17,0:17:14.53:0,15,346	0/0:16,0:17:41.77:0,42,479	0/0:24,0:24:69.20:0,69,837	0/0:32,0:32:96.29:0,96,1177	0/0:22,0:22:66.21:0,66,818	0/0:35,0:35:93.28:0,93,1132	0/0:21,0:21:63.17:0,63,766	0/0:22,0:22:66.21:0,66,817	0/0:14,0:14:39.12:0,39,483	0/0:28,0:28:81.25:0,81,1004	0/0:15,0:15:45.14:0,45,557	0/0:27,0:27:81.25:0,81,1004	0/0:27,0:27:78.23:0,78,954	0/0:24,0:24:69.22:0,69,855	0/0:33,0:33:99:0,99,1213	0/0:24,0:24:69.22:0,69,855	0/0:13,0:13:39.12:0,39,483	0/0:11,0:11:33.10:0,33,407	0/0:31,0:31:90.28:0,90,1114	0/0:9,0:9:27.08:0,27,334	0/0:13,0:13:36.11:0,36,446	0/0:26,0:26:75.24:0,75,929	0/0:22,0:22:66.21:0,66,818	0/0:18,0:18:54.17:0,54,669	0/0:19,0:19:57.18:0,57,706	0/0:4,0:4:12.04:0,12,148
chr10	95782261	.	TA	T	1497.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.011;DP=775;FS=0.600;HRun=1;HaplotypeScore=80.4500;InbreedingCoeff=0.9979;MQ=88.49;MQ0=0;MQRankSum=-4.678;QD=38.39;ReadPosRankSum=1.707;VQSLOD=4.2675;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:99:1592,114,0	0/0:9,0:9:27.07:0,27,407	0/0:24,0:24:72.19:0,72,1068	0/0:35,0:35:85.67:0,86,1333	0/0:14,0:14:42.13:0,42,647	0/0:27,0:27:72.23:0,72,1126	0/0:24,0:24:72.19:0,72,1078	0/0:42,0:42:99:0,123,1840	0/0:27,0:27:81.26:0,81,1243	0/0:31,0:31:90.31:0,90,1436	0/0:24,0:24:69.19:0,69,1030	0/0:40,0:40:99:0,120,1852	0/0:26,0:26:78.25:0,78,1219	0/0:31,0:31:93.29:0,93,1426	0/0:32,0:32:96.31:0,96,1508	0/0:32,0:32:96.31:0,96,1511	0/0:25,0:25:75.23:0,75,1171	0/0:16,0:16:45.12:0,45,685	0/0:18,0:18:54.15:0,54,794	0/0:31,0:31:90.26:0,90,1384	0/0:43,0:43:99:0,129,1956	0/0:28,0:28:81.25:0,81,1240	0/0:21,0:21:60.19:0,60,930	0/0:41,0:41:99:0,123,1912	0/0:24,0:24:69.21:0,69,1054	0/0:35,0:35:99:0,102,1479	0/0:27,0:27:81.20:0,81,1168	0/0:9,0:9:27.07:0,27,405
chr10	95782852	.	AG	A	1079.85	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.841;DP=670;FS=0.626;HRun=5;HaplotypeScore=72.3616;InbreedingCoeff=0.8579;MQ=82.39;MQ0=0;MQRankSum=-7.129;QD=28.42;ReadPosRankSum=-2.195;VQSLOD=2.8520;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,35:38:99:1175,105,0	0/0:3,0:3:9.03:0,9,123	0/0:18,0:18:42.11:0,42,534	0/0:22,0:22:32.13:0,32,629	0/0:15,0:15:36.11:0,36,475	0/0:18,0:18:48.16:0,48,657	0/0:30,0:30:87.27:0,87,1173	0/0:38,0:38:96.29:0,96,1282	0/0:23,0:23:66.19:0,66,869	0/0:18,0:18:51.17:0,51,698	0/0:12,0:12:33.10:0,33,435	0/0:28,0:28:81.26:0,81,1090	0/0:23,0:23:63.20:0,63,845	0/0:17,0:17:48.16:0,48,655	0/0:24,0:24:69.20:0,69,911	0/0:29,0:29:84.28:0,84,1149	0/0:44,0:44:99:0,126,1723	0/0:25,0:25:75.18:0,75,987	0/0:28,0:28:84.26:0,84,1131	0/0:17,0:17:45.15:0,45,614	0/0:57,0:57:99:0,153,2076	0/0:15,0:15:45.15:0,45,615	0/0:16,0:16:33.11:0,33,448	0/0:36,0:36:99:0,105,1434	0/0:12,0:12:36.12:0,36,491	0/0:31,0:31:90.28:0,90,1201	0/0:31,0:31:90.30:0,90,1229	0/0:2,0:2:5.97:0,6,60
chr10	95782864	.	C	CT	1322.26	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.823;DP=687;FS=6.256;HRun=2;HaplotypeScore=75.2453;InbreedingCoeff=0.9172;MQ=86.61;MQ0=0;MQRankSum=-6.306;QD=33.06;ReadPosRankSum=-0.905;VQSLOD=3.1910;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,38:40:99:1417,102,0	0/0:4,0:4:12.04:0,12,149	0/0:22,0:22:33.33:0,33,668	0/0:26,0:26:48.04:0,48,624	0/0:13,0:13:36.11:0,36,446	0/0:16,0:16:42.12:0,42,508	0/0:27,0:27:81.24:0,81,991	0/0:37,0:37:99:0,102,1223	0/0:23,0:23:69.22:0,69,855	0/0:19,0:19:57.17:0,57,696	0/0:17,0:17:42.10:0,42,493	0/0:27,0:27:78.24:0,78,965	0/0:23,0:23:69.17:0,69,835	0/0:16,0:16:48.11:0,48,555	0/0:26,0:26:78.21:0,78,929	0/0:33,0:33:96.28:0,96,1166	0/0:44,0:44:99:0,129,1584	0/0:23,0:23:69.20:0,69,841	0/0:31,0:31:84.20:0,84,973	0/0:18,0:18:48.11:0,48,548	0/0:58,0:58:99:0,171,2006	0/0:18,0:18:54.16:0,54,658	0/0:15,0:15:39.09:0,39,456	0/0:38,0:38:99:0,111,1325	0/0:11,0:11:27.02:0,27,315	0/0:31,0:31:93.25:0,93,1126	0/0:28,0:28:78.22:0,78,941	0/0:3,0:3:9.03:0,9,111
chr10	95783963	.	T	TAA	12592.49	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-9.420;DP=732;FS=2.004;HRun=9;HaplotypeScore=110.4114;InbreedingCoeff=0.9277;MQ=80.52;MQ0=0;MQRankSum=-4.654;QD=19.68;ReadPosRankSum=2.554;VQSLOD=3.7330;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:36:77.36:265,77,0	1/1:1,8:10:24.08:369,24,0	0/0:23,0:22:50.53:0,51,493	0/0:16,0:15:34.51:0,35,373	1/1:5,29:37:89.70:1278,90,0	1/1:5,0:17:24.95:86,25,0	1/1:3,1:21:37.94:166,38,0	1/1:6,0:31:32.57:182,33,0	1/1:8,25:35:74.74:1117,75,0	1/1:7,0:30:58.36:199,58,0	1/1:4,0:34:67.60:242,68,0	1/1:5,0:26:25.59:144,26,0	1/1:2,0:23:15.87:122,16,0	1/1:6,0:31:23.48:148,23,0	1/1:3,20:23:54.18:831,54,0	1/1:4,28:35:74.61:1098,75,0	0/0:24,0:24:57.57:0,58,600	0/0:29,0:29:81.20:0,81,861	1/1:5,17:23:54.16:803,54,0	1/1:7,31:38:96.28:1445,96,0	1/1:4,12:17:30.10:462,30,0	1/1:5,0:30:57.39:197,57,0	1/1:3,0:15:1.02:71,1,0	1/1:2,1:19:14.01:151,14,0	1/1:4,24:30:69.23:1045,69,0	1/1:5,20:28:63.20:940,63,0	1/1:1,30:32:75.11:1128,75,0	1/1:4,0:19:29.94:103,30,0
chr10	95784683	.	C	CA	3920.43	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-8.128;DP=442;FS=14.876;HRun=9;HaplotypeScore=44.7606;InbreedingCoeff=0.9368;MQ=70.79;MQ0=2;MQRankSum=-0.144;QD=24.50;ReadPosRankSum=-2.789;VQSLOD=1.9710;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:59.95:0,60,521	0/0:10,0:10:23.98:0,24,208	0/0:14,0:10:10.58:0,11,72	0/0:14,0:10:11.35:0,11,103	0/0:21,0:21:53.98:0,54,469	1/1:2,16:17:40.35:434,40,0	1/1:1,15:17:3.77:253,4,0	1/1:7,22:30:72:765,72,0	0/0:13,0:14:41.03:0,41,344	1/1:1,14:15:39.11:432,39,0	1/1:1,15:16:42.11:465,42,0	1/1:0,12:12:27.07:299,27,0	1/1:1,7:8:21.06:232,21,0	1/1:4,10:14:21.06:232,21,0	0/0:9,0:9:23.98:0,24,208	0/0:21,0:21:56.83:0,57,476	0/0:31,0:31:77.97:0,78,677	0/0:18,0:18:47.99:0,48,417	0/0:11,0:11:23.97:0,24,205	0/0:15,0:15:41.97:0,42,359	0/0:11,0:11:26.83:0,27,234	1/1:0,1:1:3.01:33,3,0	1/1:0,9:10:23.90:247,24,0	1/1:0,11:11:33.09:364,33,0	0/0:18,0:18:44.98:0,45,390	0/0:24,1:25:17.76:0,18,384	0/0:26,0:26:74.97:0,75,651	1/1:1,7:8:15.04:166,15,0
chr10	95785265	.	CT	C	5439.13	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=11.209;DP=434;FS=1.236;HRun=6;HaplotypeScore=43.8045;InbreedingCoeff=0.9818;MQ=74.54;MQ0=5;MQRankSum=-1.103;QD=28.18;ReadPosRankSum=1.540;VQSLOD=5.1355;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.25:0,87,1114	0/0:6,0:6:18.06:0,18,237	0/0:28,0:20:50.90:0,51,659	0/0:19,1:14:30.06:0,30,371	0/0:13,0:13:39.07:0,39,474	1/1:1,14:15:42.11:451,42,0	1/1:2,17:19:48.12:516,48,0	1/1:2,31:33:87.20:926,87,0	0/0:6,0:6:18.06:0,18,236	1/1:2,22:24:66.17:709,66,0	1/1:0,22:22:63.16:677,63,0	1/1:0,8:8:18.05:193,18,0	1/1:0,9:9:27.07:290,27,0	1/1:1,8:9:21.05:225,21,0	0/0:6,0:5:9.03:0,9,118	0/0:7,0:6:18.05:0,18,224	0/0:27,1:27:49:0,49,962	0/0:10,0:10:24.08:0,24,316	0/0:17,0:17:45.14:0,45,579	0/0:11,0:11:27.08:0,27,342	0/0:18,0:18:45.15:0,45,592	1/1:2,15:17:45.11:484,45,0	1/1:1,14:14:39.10:419,39,0	1/1:2,13:14:39.10:419,39,0	0/0:16,0:16:45.15:0,45,592	0/0:12,0:12:36.12:0,36,473	0/0:11,0:11:30.10:0,30,393	1/1:1,6:7:12.03:129,12,0
chr10	95785417	.	GCCCC	G	4439.64	PASS	AB=0.727;AC=25;AF=0.446;AN=56;BaseQRankSum=9.044;DP=277;FS=4.558;HRun=14;HaplotypeScore=75.2044;InbreedingCoeff=0.7289;MQ=67.09;MQ0=0;MQRankSum=-6.443;QD=26.43;ReadPosRankSum=7.696;VQSLOD=3.5831;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:8:9.03:0,9,163	0/0:1,0:1:2.97:0,3,20	0/0:22,0:12:8:0,8,154	0/0:12,0:7:9.02:0,9,151	0/0:5,0:5:2.99:0,3,44	1/1:1,14:14:39.12:552,39,0	1/1:3,11:14:27.01:382,27,0	1/1:9,6:15:14.42:211,14,0	0/0:8,0:8:15.01:0,15,211	1/1:4,14:18:41.62:593,42,0	1/1:2,11:13:20.99:297,21,0	1/1:1,8:9:18.06:255,18,0	1/1:2,13:15:35.77:509,36,0	1/1:1,9:10:27.05:381,27,0	0/0:6,0:6:8.24:0,8,109	0/0:10,0:10:27.09:0,27,496	0/0:6,0:6:15.05:0,15,242	0/0:5,0:4:5.51:0,6,63	0/0:1,0:1:0:0,0,0	0/0:1,0:1:3.01:0,3,44	0/0:8,0:9:11.94:0,12,143	1/1:3,19:22:45.14:637,45,0	1/1:1,13:14:26.84:382,27,0	1/1:4,8:12:3.47:43,3,0	0/0:8,0:9:15.03:0,15,196	0/1:5,2:8:71.12:73,0,71	0/0:6,0:6:9.02:0,9,118	1/1:0,3:3:9.03:126,9,0
chr10	95785697	.	TG	T	8444.33	PASS	AB=0.985;AC=32;AF=0.571;AN=56;BaseQRankSum=9.866;DP=647;FS=0.000;HRun=3;HaplotypeScore=104.5743;InbreedingCoeff=0.3986;MQ=72.57;MQ0=0;MQRankSum=-2.354;QD=18.98;ReadPosRankSum=4.962;VQSLOD=4.4394;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,1620	0/1:8,0:8:8:8,0,13	0/0:15,0:14:18.96:0,19,267	0/0:12,0:11:14.84:0,15,231	0/1:18,0:18:0.39:0,0,50	1/1:1,23:24:60.19:741,60,0	1/1:2,22:24:52.39:695,52,0	1/1:2,30:32:90.20:1034,90,0	0/1:19,0:19:6.48:6,0,32	1/1:4,37:41:99:1238,108,0	1/1:1,25:26:75.16:876,75,0	1/1:1,24:25:54.17:667,54,0	1/1:0,31:31:68.95:852,69,0	1/1:1,12:13:30.09:368,30,0	0/0:29,0:29:1.75:0,2,82	0/0:36,0:36:5.43:0,5,128	0/1:32,0:32:18.64:19,0,46	0/1:13,0:13:3.14:3,0,16	0/0:16,0:16:1.74:0,2,47	0/1:16,0:16:33.55:34,0,34	0/0:26,0:26:4.78:0,5,105	1/1:1,15:16:42.13:511,42,0	1/1:2,18:19:39.12:479,39,0	1/1:0,21:21:48.15:592,48,0	0/1:24,1:25:28.26:28,0,106	0/1:31,3:34:99:146,0,128	0/0:25,0:25:14.02:0,14,188	1/1:0,7:7:12.04:148,12,0
chr10	95785700	.	GT	G	8129.87	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=5.796;DP=652;FS=7.320;HRun=10;HaplotypeScore=107.5852;InbreedingCoeff=0.6131;MQ=72.56;MQ0=0;MQRankSum=-0.698;QD=14.11;ReadPosRankSum=3.439;VQSLOD=4.5988;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:46:99:0,123,1265	1/1:1,6:7:17.99:156,18,0	0/0:16,1:16:11.73:0,12,136	0/0:13,0:12:11.84:0,12,161	1/1:1,17:18:44.97:390,45,0	1/1:25,0:25:32.01:197,32,0	1/1:24,0:23:5.07:182,5,0	0/1:33,0:33:8.11:178,0,8	1/1:1,17:18:35.99:312,36,0	1/1:39,0:39:59.64:306,60,0	1/1:27,0:27:46.20:328,46,0	1/1:25,0:25:47.87:199,48,0	1/1:34,0:34:1.81:199,2,0	0/1:14,0:14:15.85:105,0,16	1/1:3,24:27:68.98:599,69,0	1/1:4,31:35:65.53:731,66,0	1/1:3,29:32:80.97:703,81,0	1/1:1,14:15:32.99:286,33,0	1/1:2,14:16:41.99:364,42,0	1/1:2,14:16:41.94:357,42,0	1/1:5,20:25:56.98:495,57,0	1/1:15,0:15:39.35:196,39,0	1/1:19,0:18:36.46:178,36,0	1/1:21,0:21:43.54:193,44,0	1/1:5,19:24:53.55:452,54,0	1/1:10,25:35:82.90:666,83,0	1/1:9,16:25:8.78:305,9,0	1/1:7,0:7:11.18:52,11,0
chr10	95786343	.	TA	T	2570.91	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=7.855;DP=443;FS=24.144;HRun=12;HaplotypeScore=46.2383;InbreedingCoeff=0.9464;MQ=60.09;MQ0=3;MQRankSum=-0.743;QD=14.69;ReadPosRankSum=0.014;VQSLOD=2.0267;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:42:99:0,102,987	0/0:4,0:4:12.01:0,12,115	0/0:8,0:4:6.01:0,6,58	0/0:14,0:8:1.81:0,2,170	0/0:13,0:14:32.89:0,33,314	1/1:4,14:19:37.87:284,38,0	1/1:2,11:13:29.88:232,30,0	1/1:9,19:30:30.36:393,30,0	0/0:13,0:13:39.06:0,39,389	1/1:3,15:21:47.86:336,48,0	1/1:3,11:14:23.79:181,24,0	1/1:1,18:20:44.81:348,45,0	1/1:2,7:9:14.93:116,15,0	1/1:1,11:12:26.90:209,27,0	0/0:13,0:13:36.07:0,36,365	0/0:14,0:14:33.05:0,33,328	0/0:24,0:23:33.50:0,34,321	0/0:25,1:26:42.89:0,43,609	0/0:17,0:16:39.04:0,39,383	0/0:16,0:15:30.06:0,30,305	0/0:11,0:11:26.85:0,27,247	1/1:0,8:8:23.91:186,24,0	1/1:0,6:6:17.93:139,18,0	1/1:1,16:17:29.88:232,30,0	0/0:15,0:15:36.07:0,36,365	0/0:20,0:20:45.05:0,45,438	0/0:16,0:16:30.50:0,30,291	1/1:0,6:6:17.93:139,18,0
chr10	95786815	.	T	TTCC	4104.08	PASS	AB=0.735;AC=23;AF=0.411;AN=56;BaseQRankSum=-9.248;DP=582;FS=5.483;HRun=0;HaplotypeScore=105.7120;InbreedingCoeff=0.8881;MQ=54.91;MQ0=14;MQRankSum=4.016;QD=16.55;ReadPosRankSum=-2.366;VQSLOD=2.6804;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,12:30:17.80:293,18,0	1/1:3,8:12:14.67:262,15,0	0/0:24,0:11:11.63:0,12,130	0/0:19,0:8:9.03:0,9,119	1/1:2,9:11:21:305,21,0	0/0:13,0:11:9.10:0,9,346	0/0:18,0:18:23.97:0,24,293	0/0:37,0:36:45.02:0,45,575	1/1:7,10:16:15.05:276,15,0	0/0:25,0:24:47.18:0,47,633	0/0:19,0:19:32.83:0,33,334	0/0:15,0:14:21.03:0,21,261	0/0:27,0:26:42.10:0,42,560	0/0:11,0:11:9.03:0,9,128	1/1:9,15:24:15.05:304,15,0	1/1:4,17:21:21.07:425,21,0	0/0:28,0:25:54.18:0,54,740	0/0:19,0:19:48.16:0,48,670	1/1:12,4:14:12.91:206,13,0	1/1:15,3:18:33.50:474,34,0	1/1:14,11:27:9.03:182,9,0	0/0:28,0:28:31.86:0,32,628	0/0:15,0:15:11.64:0,12,147	0/0:23,0:23:29.89:0,30,404	0/1:16,9:24:3.80:169,0,4	1/1:10,16:27:29.60:713,30,0	1/1:5,14:19:29.95:496,30,0	0/0:13,0:13:12.04:0,12,158
chr10	95786842	.	TTCC	T	2841.60	PASS	AB=0.796;AC=19;AF=0.352;AN=54;BaseQRankSum=-0.750;DP=624;FS=44.487;HRun=0;HaplotypeScore=95.7198;InbreedingCoeff=0.7130;MQ=40.53;MQ0=59;MQRankSum=-2.622;QD=13.16;ReadPosRankSum=-0.110;VQSLOD=1.3908;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:19:18.81:0,19,236	0/0:8,0:8:15.94:0,16,300	0/0:75,0:14:30.10:0,30,570	0/0:74,0:11:27.09:0,27,490	0/0:13,0:13:29.93:0,30,541	0/1:12,1:11:18.60:193,0,19	0/1:11,3:12:5.20:79,0,5	1/1:15,9:17:14.93:151,15,0	0/0:16,0:13:11.67:0,12,191	1/1:20,9:25:6.25:605,6,0	1/1:12,11:22:33.06:442,33,0	0/1:6,8:12:5.90:120,0,6	1/1:4,21:24:30.10:440,30,0	./.	0/0:15,0:14:24.04:0,24,425	0/0:18,0:18:21.03:0,21,391	0/0:21,0:19:36.12:0,36,695	0/0:18,0:15:36.09:0,36,692	0/0:14,0:6:18.06:0,18,358	0/0:22,0:21:4.81:0,5,588	0/0:14,0:12:9.03:0,9,162	1/1:19,10:24:23.09:526,23,0	1/1:6,8:12:8.05:129,8,0	1/1:7,9:16:18.06:264,18,0	0/0:20,0:19:22.65:0,23,351	0/0:29,0:25:67:0,67,1218	0/0:19,0:18:21.07:0,21,433	1/1:3,12:15:8.06:87,8,0
chr10	95786918	.	CCTT	C	771.64	PASS	AB=1.000;AC=37;AF=0.712;AN=52;BaseQRankSum=-4.101;DP=278;FS=1.251;HRun=0;HaplotypeScore=57.9875;InbreedingCoeff=0.1804;MQ=31.13;MQ0=19;MQRankSum=1.917;QD=3.49;ReadPosRankSum=0.891;VQSLOD=1.6590;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,1:9:1.16:17,1,0	1/1:5,0:5:0.47:1,0,0	0/0:20,0:2:1.32:0,1,5	0/0:22,0:3:5.98:0,6,61	1/1:12,1:12:5.88:50,6,0	1/1:3,0:3:2.76:19,3,0	1/1:11,0:11:12.95:66,13,0	1/1:19,0:15:25.66:171,26,0	0/1:12,0:10:5.88:18,0,6	1/1:9,1:8:16.61:101,17,0	1/1:9,1:9:7.82:44,8,0	1/1:7,0:7:12.33:57,12,0	./.	1/1:4,0:3:4.51:22,5,0	0/1:14,0:12:40.37:49,0,40	1/1:9,0:7:0.89:2,1,0	0/0:4,0:2:1.25:0,1,3	0/0:4,0:3:3.90:0,4,43	1/1:4,0:2:2.88:15,3,0	1/1:21,0:19:1.77:55,2,0	0/1:10,0:7:8.16:8,0,33	1/1:11,0:7:2.59:11,3,0	1/1:6,1:5:11.68:70,12,0	0/0:3,0:2:3.01:0,3,36	0/1:19,0:17:8:8,0,37	0/1:12,0:10:16.58:80,0,17	1/1:8,0:6:5.77:43,6,0	./.
chr10	95786925	.	C	CTCT	915.78	PASS	AB=0.976;AC=24;AF=0.444;AN=54;BaseQRankSum=-0.034;DP=275;FS=7.184;HRun=0;HaplotypeScore=62.4132;InbreedingCoeff=0.3592;MQ=31.32;MQ0=19;MQRankSum=0.275;QD=5.65;ReadPosRankSum=3.887;VQSLOD=0.8167;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:9:6.50:57,6,0	1/1:5,0:5:2.97:20,3,0	1/1:20,0:2:2.37:10,2,0	0/0:21,0:3:6.02:0,6,89	1/1:13,0:12:7.63:72,8,0	0/0:2,0:2:2.88:0,3,15	0/0:10,0:10:10.92:0,11,58	0/0:17,0:13:24.21:0,24,132	1/1:12,1:11:11.48:140,11,0	0/1:11,0:9:22:22,0,55	0/0:7,0:6:3.06:0,3,8	0/0:8,0:7:10.82:0,11,45	0/0:4,0:3:0:0,0,0	0/0:3,0:3:5.86:0,6,35	0/1:16,0:14:29.26:29,0,42	0/0:9,0:7:0.47:0,0,1	0/1:5,0:3:0.30:18,0,0	1/1:4,0:3:0.66:12,1,0	1/1:3,0:2:1.12:37,1,0	1/1:19,0:17:24.11:186,24,0	0/0:11,0:8:2.32:0,2,13	0/0:10,0:6:8.79:0,9,52	0/0:6,0:5:7.10:0,7,39	0/0:3,0:2:2.80:0,3,13	0/1:17,2:17:4.50:234,0,5	1/1:12,1:11:0.57:180,1,0	1/1:8,0:6:7.52:55,8,0	./.
chr10	95787054	.	CCTT	C	690.69	PASS	AB=0.913;AC=22;AF=0.393;AN=56;BaseQRankSum=5.727;DP=383;FS=4.157;HRun=0;HaplotypeScore=77.6960;InbreedingCoeff=-0.0650;MQ=29.04;MQ0=52;MQRankSum=-4.916;QD=3.04;ReadPosRankSum=-0.390;VQSLOD=0.8150;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:19:36.57:0,37,700	0/1:11,0:8:20.10:20,0,139	0/0:22,0:3:6.02:0,6,109	0/0:21,0:1:3.01:0,3,68	0/1:12,0:10:13.25:13,0,181	1/1:8,5:12:3.14:98,3,0	0/1:13,1:11:42.64:43,0,49	1/1:18,1:8:0.47:1,0,0	0/1:9,3:9:25.31:25,0,133	0/1:14,3:11:5.42:87,0,5	1/1:2,2:4:5.75:51,6,0	1/1:6,6:11:5.52:89,6,0	0/1:8,1:7:6.46:61,0,6	0/1:7,1:8:6.13:18,0,6	0/0:7,1:7:2.05:0,2,31	0/1:8,1:7:22.24:22,0,38	0/1:22,2:20:8.83:9,0,571	0/0:15,0:14:13.90:0,14,269	0/1:14,0:8:3.58:4,0,72	0/0:11,1:8:11.95:0,12,167	0/0:20,0:13:7.97:0,8,206	1/1:9,5:12:2.40:99,2,0	0/0:10,1:9:1.44:0,1,19	0/0:8,2:8:11.43:0,11,64	0/1:12,0:9:19.72:20,0,224	0/1:16,7:21:99:181,0,379	0/0:8,0:7:11.93:0,12,171	0/0:5,0:3:0.47:0,0,1
chr10	95787061	.	CTCTTCT	C	897.67	PASS	AB=0.957;AC=20;AF=0.357;AN=56;BaseQRankSum=5.823;DP=393;FS=3.079;HRun=0;HaplotypeScore=92.9755;InbreedingCoeff=-0.0968;MQ=31.06;MQ0=54;MQRankSum=-6.107;QD=4.25;ReadPosRankSum=0.397;VQSLOD=1.8038;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:21:8.15:0,8,1367	0/1:10,0:7:25.73:26,0,326	0/0:21,0:3:6.02:0,6,152	0/0:23,0:1:3.01:0,3,54	0/0:13,0:11:1.17:0,1,459	1/1:13,0:12:11.93:101,12,0	0/1:14,0:11:22.17:64,0,22	0/1:16,0:7:8.78:27,0,9	0/1:11,2:10:58.50:58,0,230	0/1:17,0:10:21.44:56,0,21	1/1:3,0:3:5.96:54,6,0	0/1:13,0:12:19.37:30,0,19	0/1:11,0:9:10.55:98,0,11	0/0:5,0:5:6.08:0,6,28	0/1:7,1:7:1.43:1,0,283	0/0:7,1:6:7.85:0,8,125	0/0:23,0:22:2.36:0,2,1181	0/0:18,0:17:14.82:0,15,600	0/1:17,0:9:51.57:52,0,205	0/0:12,1:9:18.06:0,18,503	0/1:20,1:15:5.36:5,0,553	1/1:14,0:12:1.56:111,2,0	0/1:10,0:8:24.11:24,0,32	0/0:10,0:8:10.94:0,11,112	0/0:13,0:10:15.87:0,16,422	0/1:17,7:22:99:341,0,915	0/0:8,0:7:12.04:0,12,353	1/1:7,0:4:1.25:3,1,0
chr10	95787064	.	TTCTTCC	T	1148.86	PASS	AB=0.964;AC=21;AF=0.375;AN=56;BaseQRankSum=6.797;DP=398;FS=4.881;HRun=0;HaplotypeScore=94.3320;InbreedingCoeff=0.2455;MQ=31.47;MQ0=51;MQRankSum=-6.033;QD=6.11;ReadPosRankSum=0.493;VQSLOD=1.5208;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:22:44.47:0,44,1517	0/1:10,0:7:7.82:8,0,331	0/0:21,0:3:6.02:0,6,113	0/0:24,0:1:3.01:0,3,59	0/0:12,0:11:16.77:0,17,529	1/1:11,2:12:11.46:152,11,0	0/1:13,2:12:24.40:116,0,24	1/1:15,0:7:2.59:37,3,0	0/1:13,0:11:23.77:24,0,287	0/1:17,1:11:19.96:149,0,20	1/1:2,1:3:6.02:85,6,0	1/1:13,0:12:19.65:125,20,0	0/1:9,2:9:7.52:129,0,8	1/1:5,0:5:0.42:8,0,0	0/0:8,0:7:15.52:0,16,324	0/0:8,0:6:11.76:0,12,176	0/0:25,0:22:14.64:0,15,1234	0/0:18,0:17:36.18:0,36,644	0/1:16,0:10:1.39:1,0,266	0/0:13,0:9:18.06:0,18,569	0/0:24,0:18:25.83:0,26,745	1/1:13,1:12:6.23:227,6,0	0/1:10,0:8:32.10:73,0,32	0/0:10,0:8:12.48:0,12,123	0/0:12,0:9:15.01:0,15,445	0/1:26,0:24:99:181,0,1009	0/0:8,0:7:12.04:0,12,358	0/1:6,0:3:0:0,0,0
chr10	95787073	.	CTCT	C	819.67	PASS	AB=0.909;AC=18;AF=0.321;AN=56;BaseQRankSum=5.965;DP=457;FS=7.882;HRun=0;HaplotypeScore=90.1058;InbreedingCoeff=0.2314;MQ=31.16;MQ0=63;MQRankSum=-4.503;QD=3.92;ReadPosRankSum=-1.070;VQSLOD=1.0484;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:28:54.44:0,54,997	0/0:11,0:8:4.39:0,4,230	0/1:20,0:3:0.83:1,0,25	0/0:26,0:1:2.96:0,3,19	0/0:12,1:11:18.03:0,18,364	0/1:13,4:14:9.28:118,0,9	0/1:16,1:11:43.44:44,0,43	0/1:20,1:9:32.75:50,0,33	0/0:13,0:11:17.78:0,18,250	0/1:16,5:14:65:162,0,65	1/1:3,1:3:5.61:50,6,0	1/1:7,5:11:12.50:133,12,0	1/1:14,0:11:11.85:65,12,0	0/1:3,2:5:6.39:49,0,6	0/0:12,0:8:17.92:0,18,230	0/0:9,0:7:9.03:0,9,149	0/0:26,0:24:6.73:0,7,863	0/1:22,0:20:6.13:6,0,490	0/1:22,0:8:1.52:2,0,206	0/0:15,0:12:21.04:0,21,392	0/0:26,0:21:41.58:0,42,689	1/1:12,5:14:22.83:238,23,0	0/1:9,1:8:19.43:65,0,19	0/0:10,2:8:10.30:0,10,66	0/0:15,0:11:23.98:0,24,391	0/0:28,0:27:50.36:0,50,867	0/0:10,0:9:12:0,12,225	0/1:6,0:3:0:0,0,0
chr10	95787085	.	CTCCTCT	C	285.46	PASS	AB=0.976;AC=9;AF=0.173;AN=52;BaseQRankSum=5.674;DP=503;FS=7.248;HRun=0;HaplotypeScore=125.3651;InbreedingCoeff=-0.0083;MQ=32.77;MQ0=70;MQRankSum=-5.225;QD=2.02;ReadPosRankSum=-4.213;VQSLOD=0.4589;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:33:78.07:0,78,1752	0/0:9,0:8:17.92:0,18,384	./.	./.	0/0:12,0:11:21.06:0,21,609	0/1:18,0:16:16.90:32,0,17	0/1:23,2:19:72.82:73,0,109	0/0:22,0:8:2.73:0,3,174	0/0:13,0:11:26.48:0,26,296	0/1:27,1:22:79.79:80,0,185	1/1:6,0:5:8.68:59,9,0	0/0:11,0:10:1.29:0,1,41	0/1:18,0:13:3.12:3,0,67	0/0:8,0:8:13.14:0,13,109	0/0:12,0:8:17.95:0,18,340	0/0:7,0:5:9.02:0,9,204	0/0:29,0:26:59.92:0,60,1432	0/0:26,0:20:37.05:0,37,672	0/0:23,0:7:14.23:0,14,160	0/0:20,0:16:29.81:0,30,396	0/0:31,0:27:58.73:0,59,1226	0/1:20,0:17:22.82:126,0,23	0/1:9,0:6:28.21:28,0,78	0/1:14,1:10:17.35:17,0,107	0/0:16,0:13:30.10:0,30,783	0/0:29,0:27:63.78:0,64,1272	0/0:11,0:10:15.02:0,15,324	0/0:6,0:3:2.90:0,3,16
chr10	95787120	.	T	TCTC	4463.80	PASS	AB=0.832;AC=20;AF=0.370;AN=54;BaseQRankSum=0.575;DP=434;FS=3.428;HRun=0;HaplotypeScore=82.8430;InbreedingCoeff=0.6327;MQ=50.76;MQ0=29;MQRankSum=-5.112;QD=24.80;ReadPosRankSum=-1.047;VQSLOD=4.6309;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:30:66.20:0,66,956	0/0:8,0:7:15.89:0,16,201	0/0:26,0:15:30.24:0,30,397	0/0:20,0:10:20.98:0,21,271	0/0:9,0:8:15.05:0,15,223	0/1:8,2:9:12.43:260,0,12	1/1:11,11:20:41.96:750,42,0	1/1:17,0:15:5.99:74,6,0	0/0:12,0:12:30.03:0,30,384	0/1:19,7:22:54.98:557,0,55	1/1:5,2:6:12.04:243,12,0	1/1:11,3:13:27:414,27,0	1/1:9,3:11:18.06:341,18,0	1/1:6,4:10:18.06:366,18,0	0/0:8,0:6:12.01:0,12,167	0/0:9,0:9:18.06:0,18,269	0/0:31,0:30:75.11:0,75,999	0/0:23,0:20:43.02:0,43,607	0/0:11,0:7:9:0,9,110	0/1:12,0:12:7.12:7,0,371	0/0:28,0:27:54.16:0,54,764	0/1:10,4:12:7.08:313,0,7	1/1:4,5:8:1.63:346,2,0	1/1:13,10:21:39.02:792,39,0	0/0:9,0:9:21.07:0,21,314	0/0:12,0:11:21.96:0,22,313	0/0:12,0:12:27.09:0,27,401	./.
chr10	95787822	.	GGA	G	3130.46	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=5.435;DP=420;FS=15.046;HRun=0;HaplotypeScore=59.3912;InbreedingCoeff=0.9359;MQ=67.97;MQ0=32;MQRankSum=-2.575;QD=25.45;ReadPosRankSum=0.700;VQSLOD=3.2614;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:27.05:0,27,576	0/0:2,0:1:3.01:0,3,60	0/0:67,0:17:27.69:0,28,221	0/0:71,0:21:11.05:0,11,300	0/0:19,0:19:39.09:0,39,646	1/1:0,7:7:9.03:142,9,0	1/1:1,15:18:39.13:577,39,0	1/1:2,16:18:45.03:592,45,0	0/0:6,0:6:18.05:0,18,305	1/1:0,11:11:33.04:467,33,0	1/1:0,6:6:11.95:135,12,0	1/1:3,7:8:24.04:318,24,0	1/1:1,8:7:14.08:186,14,0	1/1:0,6:7:15.04:219,15,0	0/0:8,0:8:24.05:0,24,409	0/0:5,0:5:15.02:0,15,231	0/0:12,0:12:20.03:0,20,285	0/0:18,0:17:31.95:0,32,479	0/0:10,0:10:26.06:0,26,400	0/0:16,0:15:42.29:0,42,619	0/0:7,0:7:21.03:0,21,286	1/1:5,4:6:15:166,15,0	1/1:0,9:9:11.93:161,12,0	1/1:1,10:12:14.85:156,15,0	0/0:14,0:14:27.01:0,27,388	0/0:17,0:17:50.59:0,51,764	0/0:12,0:12:36.04:0,36,571	1/1:0,5:6:15.05:234,15,0
chr10	95787823	.	GAAAAAAAAAAAAGCAAAAAAAAAAAAAAAAA	G	767.84	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=1.739;DP=437;FS=21.737;HRun=0;HaplotypeScore=234.0889;InbreedingCoeff=0.5145;MQ=66.80;MQ0=33;MQRankSum=-1.526;QD=21.94;ReadPosRankSum=1.834;VQSLOD=1.2214;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:33.11:0,33,3490	0/0:2,0:1:3.01:0,3,339	0/0:67,0:17:36.11:0,36,1226	0/0:72,0:21:35.09:0,35,1544	0/0:20,0:20:42.14:0,42,2496	0/0:7,0:7:9.03:0,9,402	0/0:18,0:18:38.34:0,38,1357	0/0:18,0:18:31.15:0,31,1037	0/0:6,0:6:15.05:0,15,1349	0/0:11,0:11:23.20:0,23,880	0/0:6,0:6:9.03:0,9,457	0/0:9,0:7:18.06:0,18,662	0/0:9,0:7:15.05:0,15,656	0/0:7,0:7:15.01:0,15,717	0/0:10,0:10:18.05:0,18,1256	0/0:6,0:6:9.03:0,9,1040	1/1:6,6:12:6.02:405,6,0	1/1:11,7:17:6.02:455,6,0	0/0:12,0:12:27.06:0,27,1811	0/0:17,0:17:36.11:0,36,2555	0/1:4,0:5:17.16:17,0,672	0/0:9,0:6:9.02:0,9,443	0/0:9,0:9:14.74:0,15,538	0/0:13,0:12:8.93:0,9,345	0/0:16,0:16:21.03:0,21,1042	0/0:19,0:19:45.14:0,45,3383	0/0:13,0:13:27.03:0,27,1884	0/0:8,0:7:15.05:0,15,580
chr10	95788922	.	T	TCCCCAAC	1825.95	PASS	AC=14;AF=0.304;AN=46;BaseQRankSum=1.086;DP=262;FS=2.114;HRun=0;HaplotypeScore=40.0748;InbreedingCoeff=0.7771;MQ=37.90;MQ0=88;MQRankSum=-5.797;QD=36.52;ReadPosRankSum=-1.178;VQSLOD=3.0236;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:3:9.03:0,9,228	0/0:5,0:4:9.03:0,9,228	0/0:9,0:2:5.99:0,6,92	0/0:10,0:1:2.22:0,2,7	0/0:11,0:11:20.90:0,21,414	./.	1/1:2,1:2:3.01:118,3,0	./.	0/0:14,0:10:21:0,21,474	1/1:3,3:6:9.03:256,9,0	1/1:3,5:6:12.04:468,12,0	./.	1/1:1,1:1:3.01:39,3,0	./.	0/0:17,0:12:24.04:0,24,551	0/0:11,0:8:24.01:0,24,550	0/0:22,0:9:21.07:0,21,458	0/0:20,0:10:24.04:0,24,536	0/0:7,0:4:12.04:0,12,304	0/0:6,0:6:12.04:0,12,304	0/0:18,0:4:9.03:0,9,228	1/1:2,9:7:11.83:365,12,0	1/1:2,8:7:15.05:505,15,0	./.	0/0:16,0:15:38.89:0,39,758	0/0:10,0:5:15.05:0,15,381	0/0:12,0:9:24.04:0,24,551	1/1:2,2:3:6.02:235,6,0
chr10	95789034	.	T	TA	2264.94	PASS	AC=20;AF=0.476;AN=42;BaseQRankSum=1.241;DP=385;FS=0.000;HRun=5;HaplotypeScore=45.4869;InbreedingCoeff=0.6633;MQ=36.52;MQ0=167;MQRankSum=-2.404;QD=15.95;ReadPosRankSum=-0.095;VQSLOD=2.3889;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:4:12.03:0,12,129	1/1:1,3:2:6.02:79,6,0	0/0:10,0:4:6.02:0,6,64	./.	1/1:2,12:10:14.88:197,15,0	0/0:20,0:15:3.01:0,3,32	0/0:11,0:3:3.01:0,3,32	./.	1/1:0,15:9:15.05:197,15,0	0/0:18,0:14:32.62:0,33,354	0/0:12,0:8:6.01:0,6,64	./.	0/0:13,0:8:3.01:0,3,32	0/0:12,0:4:3.01:0,3,32	1/1:2,15:10:18.06:237,18,0	1/1:0,9:6:9:100,9,0	./.	0/0:14,0:6:3.01:0,3,32	1/1:0,11:3:3.01:39,3,0	1/1:2,14:11:27.05:335,27,0	./.	0/0:12,0:6:3.01:0,3,32	0/0:10,0:8:2.89:0,3,32	./.	1/1:1,19:15:29.96:374,30,0	1/1:3,12:14:33.11:429,33,0	1/1:1,19:15:33.11:434,33,0	./.
chr10	95789137	.	G	GGTT	1357.50	PASS	AB=0.663;AC=28;AF=0.500;AN=56;BaseQRankSum=6.687;DP=484;FS=30.458;HRun=0;HaplotypeScore=80.0368;InbreedingCoeff=-0.3032;MQ=47.06;MQ0=77;MQRankSum=-2.319;QD=3.56;ReadPosRankSum=-1.356;VQSLOD=0.2113;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:17.65:0,18,156	0/1:1,0:6:9.31:48,0,9	0/0:16,0:4:2.51:0,3,16	0/1:21,0:9:13.41:13,0,30	0/1:8,0:21:29.26:188,0,29	0/1:8,0:14:13.21:27,0,13	0/1:5,0:9:3.58:4,0,60	0/1:18,0:13:48.94:49,0,122	1/1:1,0:13:13.51:98,14,0	0/1:3,0:9:48.20:62,0,48	1/1:3,0:7:4.11:11,4,0	0/1:9,0:10:4.89:5,0,58	0/1:4,0:13:0.48:76,0,0	0/1:6,0:14:33.41:33,0,55	1/1:6,0:18:8:195,8,0	0/1:4,0:15:20.85:103,0,21	0/0:23,0:19:17.61:0,18,144	0/0:13,0:12:11.58:0,12,118	0/1:9,0:13:18.89:123,0,19	0/1:7,0:14:21.96:22,0,64	1/1:8,0:9:3.84:35,4,0	0/1:1,0:8:10.03:29,0,10	0/1:11,0:11:9.51:26,0,10	0/0:6,0:12:0.47:0,0,23	0/1:10,1:23:45.19:122,0,45	0/1:9,0:13:71.05:89,0,71	1/1:8,0:21:16.19:124,16,0	0/1:6,0:15:32.12:32,0,43
chr10	95790059	.	C	CCT	5610.13	PASS	AB=1.000;AC=48;AF=0.889;AN=54;BaseQRankSum=-0.200;DP=502;FS=0.695;HRun=0;HaplotypeScore=86.5535;InbreedingCoeff=0.7506;MQ=63.26;MQ0=14;MQRankSum=-4.987;QD=12.81;ReadPosRankSum=1.292;VQSLOD=4.7208;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:32.88:261,33,0	1/1:8,0:8:17.78:157,18,0	0/0:28,0:19:50.19:0,50,516	0/0:27,0:18:38.63:0,39,396	1/1:18,0:18:29.94:245,30,0	1/1:22,0:22:56.76:447,57,0	1/1:2,32:32:6.02:112,6,0	1/1:17,0:16:41.88:363,42,0	1/1:13,0:12:23.97:198,24,0	1/1:15,0:14:27.84:237,28,0	1/1:9,0:9:17.15:113,17,0	1/1:21,0:21:3.01:37,3,0	1/1:7,0:7:14.98:123,15,0	0/1:14,0:14:0:0,0,0	1/1:16,0:16:32.78:272,33,0	1/1:12,0:12:20.98:175,21,0	1/1:19,0:18:44.58:322,45,0	1/1:7,0:7:17.85:127,18,0	1/1:27,0:26:68.59:564,69,0	1/1:12,0:12:26.91:218,27,0	1/1:60,0:55:80.70:639,81,0	1/1:8,2:10:20.97:193,21,0	./.	0/1:25,0:25:0:0,0,0	1/1:10,0:9:11.97:97,12,0	1/1:18,0:18:44.75:347,45,0	1/1:11,0:11:26.91:274,27,0	1/1:9,1:10:8.97:91,9,0
chr10	95790060	.	C	CTCTGTG	6078.78	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=-1.341;DP=580;FS=0.000;HRun=0;HaplotypeScore=125.4201;InbreedingCoeff=0.5094;MQ=59.76;MQ0=19;MQRankSum=-4.062;QD=12.69;ReadPosRankSum=2.302;VQSLOD=4.0370;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:32.88:261,33,0	1/1:9,0:9:17.78:204,18,0	0/0:28,0:19:50.19:0,50,517	0/0:27,0:18:38.63:0,39,395	1/1:21,0:21:29.93:245,30,0	1/1:30,0:30:57.37:523,57,0	1/1:36,0:33:6.01:63,6,0	1/1:21,0:20:43.47:368,43,0	1/1:15,0:14:23.22:196,23,0	0/1:18,0:17:9.51:202,0,10	0/1:9,0:9:36.86:74,0,37	1/1:9,14:27:2.81:74,3,0	1/1:10,0:9:14.98:123,15,0	1/1:5,0:17:2.86:27,3,0	1/1:18,0:18:32.82:305,33,0	1/1:13,0:13:22.79:180,23,0	1/1:19,0:18:44.58:322,45,0	1/1:8,0:8:17.85:127,18,0	1/1:27,0:26:66.66:557,67,0	1/1:16,0:15:26.91:218,27,0	1/1:65,0:60:81.17:640,81,0	1/1:16,0:16:21:233,21,0	0/0:6,9:16:0.07:0,0,0	0/0:6,22:30:0.36:0,0,1	1/1:16,0:14:11.97:97,12,0	1/1:23,0:21:52.39:476,52,0	1/1:12,0:12:12.62:336,13,0	1/1:2,6:10:8.98:231,9,0
chr10	95790097	.	TGTGTGTGTGTGTGC	T	217.30	PASS	AB=1.000;AC=18;AF=0.346;AN=52;BaseQRankSum=-0.681;DP=441;FS=1.533;HRun=0;HaplotypeScore=140.0087;InbreedingCoeff=-0.1052;MQ=41.19;MQ0=27;MQRankSum=0.748;QD=0.88;ReadPosRankSum=-2.984;VQSLOD=2.1621;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,26:33:0.47:1,0,0	0/0:8,0:8:6.49:0,6,253	./.	./.	0/0:17,0:17:9.01:0,9,211	0/0:18,0:16:3.24:0,3,1092	0/1:26,0:23:34.52:35,0,625	0/1:14,0:11:19.40:19,0,383	0/0:11,0:11:3.48:0,3,99	0/1:18,0:15:25.06:25,0,748	0/1:9,0:8:8.77:9,0,445	0/1:23,0:22:12.73:13,0,244	1/1:11,0:9:12.40:76,12,0	0/1:16,0:16:36.13:36,0,107	0/0:17,0:17:15.52:0,16,447	0/0:10,0:10:9.03:0,9,257	1/1:15,0:15:4.01:21,4,0	0/1:9,0:7:5.62:31,0,6	0/1:8,0:8:8.53:9,0,420	0/0:9,0:7:3.01:0,3,140	0/0:44,0:38:7.51:0,8,227	0/1:17,0:17:18.72:19,0,548	0/1:11,0:11:0:0,0,0	0/1:29,0:26:57.68:58,0,484	0/0:20,0:18:0.47:0,0,1	0/0:22,0:20:11.07:0,11,1047	0/0:10,0:10:8.48:0,8,624	0/1:9,0:9:6.71:7,0,449
chr10	95790109	.	TGCGCGCGCGCGCGCACAC	T	1753.22	PASS	AB=1.000;AC=20;AF=0.417;AN=48;BaseQRankSum=4.429;DP=385;FS=6.001;HRun=0;HaplotypeScore=138.3080;InbreedingCoeff=0.6049;MQ=47.50;MQ0=22;MQRankSum=-5.629;QD=10.56;ReadPosRankSum=-1.081;VQSLOD=1.7767;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:31:0.47:1,0,0	1/1:4,2:6:1.77:3,2,0	./.	0/0:4,0:3:3.01:0,3,50	./.	0/0:17,0:15:21.07:0,21,1534	0/0:23,0:20:30.10:0,30,1755	0/0:7,0:10:15.05:0,15,566	1/1:4,5:9:0.89:2,1,0	0/0:16,0:14:39.13:0,39,1984	0/0:9,0:8:18.06:0,18,1212	0/1:16,0:15:3.98:4,0,705	0/0:14,0:12:20.99:0,21,1339	0/0:16,0:16:24.08:0,24,1516	1/1:11,4:15:6.02:143,6,0	1/1:5,5:10:1.25:3,1,0	0/1:17,0:17:5.42:5,0,116	0/0:10,0:8:8.01:0,8,117	1/1:3,2:5:8.77:314,9,0	./.	1/1:30,2:28:3.48:125,3,0	0/0:16,0:16:18.06:0,18,1133	0/0:8,0:8:0:0,0,0	0/0:27,0:24:33.11:0,33,1978	./.	1/1:10,6:14:17.89:723,18,0	1/1:6,3:9:18:577,18,0	0/0:8,0:8:21.07:0,21,1162
chr10	95790110	.	GCGCGCGCGCGCGCACA	G	1693.10	PASS	AB=1.000;AC=22;AF=0.458;AN=48;BaseQRankSum=5.095;DP=359;FS=7.808;HRun=0;HaplotypeScore=128.0598;InbreedingCoeff=0.5060;MQ=48.67;MQ0=21;MQRankSum=-6.166;QD=10.08;ReadPosRankSum=-0.482;VQSLOD=1.1705;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:0.47:1,0,0	1/1:6,0:6:0.04:0,0,0	./.	0/0:4,0:3:3.48:0,3,45	./.	0/0:15,0:14:21.07:0,21,1369	0/0:24,0:21:33.11:0,33,1684	0/0:9,0:7:14.99:0,15,466	1/1:8,0:8:0.47:1,0,0	0/0:16,0:15:42.05:0,42,1888	0/0:9,0:8:18.06:0,18,1058	0/1:15,0:14:4.86:5,0,613	0/0:14,0:12:20.58:0,21,1173	0/0:16,0:16:24.08:0,24,1330	1/1:10,4:14:6.02:163,6,0	1/1:8,1:9:1.25:3,1,0	0/1:17,0:17:45.28:58,0,45	0/1:10,0:8:33.94:34,0,48	1/1:5,0:5:8.98:282,9,0	./.	1/1:23,0:20:3.48:107,3,0	0/0:15,0:15:18.06:0,18,994	0/1:7,0:7:0:0,0,0	0/0:27,0:24:33.08:0,33,1731	./.	1/1:14,0:12:15.48:647,15,0	1/1:7,2:9:12.04:539,12,0	0/0:7,0:7:21.07:0,21,1030
chr10	95790112	.	GCGCGCGCGCGCACA	G	1589.06	PASS	AB=1.000;AC=20;AF=0.435;AN=46;BaseQRankSum=6.348;DP=347;FS=3.083;HRun=0;HaplotypeScore=120.1260;InbreedingCoeff=0.6282;MQ=48.87;MQ0=21;MQRankSum=-6.553;QD=11.60;ReadPosRankSum=-0.654;VQSLOD=2.1705;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:0.47:1,0,0	1/1:5,0:5:0.47:1,0,0	./.	0/0:4,0:3:3.45:0,3,23	./.	0/0:15,0:14:24.08:0,24,1368	0/0:24,0:21:39.13:0,39,1751	0/0:10,0:8:14.94:0,15,405	./.	0/0:15,0:14:39.55:0,40,1601	0/0:9,0:8:18.06:0,18,912	0/0:13,0:12:12:0,12,539	0/0:15,0:13:23.24:0,23,1190	0/0:16,0:16:24.08:0,24,1141	1/1:13,0:13:6.02:181,6,0	1/1:8,1:9:1.25:3,1,0	1/1:17,0:17:2.53:111,3,0	0/1:11,0:9:21.69:117,0,22	1/1:5,0:5:5.70:222,6,0	./.	1/1:17,1:15:3.48:88,3,0	0/0:15,0:15:18.06:0,18,872	0/1:7,0:7:0:0,0,0	0/0:26,0:23:33.08:0,33,1498	./.	1/1:12,1:11:15.05:570,15,0	1/1:8,0:8:12.04:441,12,0	0/0:7,0:7:21.07:0,21,898
chr10	95790122	.	GCACA	G	752.88	PASS	AB=1.000;AC=15;AF=0.357;AN=42;BaseQRankSum=7.444;DP=318;FS=10.680;HRun=0;HaplotypeScore=90.6411;InbreedingCoeff=0.8146;MQ=51.92;MQ0=16;MQRankSum=-7.985;QD=10.60;ReadPosRankSum=1.664;VQSLOD=1.6427;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:5.95:0,6,98	./.	./.	0/0:4,0:3:2.98:0,3,22	./.	0/0:13,0:13:27.09:0,27,574	0/0:23,0:21:48.05:0,48,756	0/0:12,0:11:23.99:0,24,361	./.	0/0:15,0:14:42.07:0,42,653	0/0:9,0:8:18.95:0,19,320	0/0:13,0:12:18.06:0,18,263	0/0:16,0:14:33.03:0,33,559	0/0:17,0:17:36.09:0,36,533	1/1:10,0:10:6.01:60,6,0	./.	1/1:3,15:18:23.99:279,24,0	1/1:3,10:11:15.05:221,15,0	1/1:2,0:2:6.01:57,6,0	./.	1/1:5,3:6:3.01:34,3,0	0/0:12,0:12:21.07:0,21,351	0/1:7,0:7:0:0,0,0	0/0:24,0:21:33.34:0,33,498	./.	1/1:8,0:7:15.02:146,15,0	1/1:5,0:5:12.02:114,12,0	0/0:11,0:11:33.04:0,33,483
chr10	95790129	.	CGCGT	C	262.29	PASS	AB=0.920;AC=6;AF=0.120;AN=50;BaseQRankSum=7.351;DP=363;FS=8.757;HRun=0;HaplotypeScore=98.6190;InbreedingCoeff=0.1255;MQ=56.98;MQ0=9;MQRankSum=-7.132;QD=3.59;ReadPosRankSum=2.746;VQSLOD=1.2930;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:18.06:0,18,437	0/0:3,0:3:3.01:0,3,45	0/0:1,0:1:3.01:0,3,81	0/0:7,0:6:7.68:0,8,140	0/0:11,0:11:3.01:0,3,49	0/0:13,0:13:27.09:0,27,728	0/0:22,0:20:51.18:0,51,1322	0/0:15,0:15:45.15:0,45,1037	./.	0/0:14,0:14:42.14:0,42,1076	0/0:10,0:9:24.04:0,24,547	0/0:14,0:14:24.08:0,24,629	0/0:13,0:13:36.12:0,36,922	0/0:17,0:17:36.12:0,36,912	0/1:16,0:16:4.64:5,0,164	./.	0/1:10,9:19:13.33:135,0,13	1/1:9,4:12:20.11:210,20,0	0/0:8,0:8:6.36:0,6,335	./.	0/0:21,0:18:8.92:0,9,127	0/0:9,0:9:21.07:0,21,542	0/0:5,0:5:3:0,3,49	0/0:23,0:20:39.13:0,39,980	0/0:16,0:16:3.01:0,3,50	0/1:13,0:12:14.41:14,0,249	0/1:11,0:11:17.07:17,0,24	0/0:11,0:11:21.07:0,21,566
chr10	95790686	.	G	GA	1367.53	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.319;DP=606;FS=0.536;HRun=10;HaplotypeScore=65.5282;InbreedingCoeff=0.8612;MQ=60.94;MQ0=20;MQRankSum=0.185;QD=20.41;ReadPosRankSum=1.571;VQSLOD=4.6068;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:33:74.17:0,74,677	0/0:10,0:10:23.97:0,24,197	0/0:29,0:6:14.97:0,15,121	0/0:27,0:6:8.99:0,9,73	0/0:22,1:24:31.16:0,31,373	0/0:23,0:23:59.91:0,60,490	0/0:16,1:16:3.92:0,4,233	0/0:18,0:19:39.82:0,40,305	0/0:16,0:16:26.94:0,27,222	0/0:15,0:16:28.98:0,29,226	0/0:15,0:15:32.94:0,33,269	0/0:18,1:19:12.94:0,13,310	0/0:21,0:21:50.92:0,51,419	0/0:26,0:27:67.88:0,68,540	0/0:20,0:20:50.94:0,51,419	0/0:13,0:14:31.98:0,32,252	1/1:3,23:25:41.54:647,42,0	1/1:7,34:40:80.79:842,81,0	0/0:16,1:17:14.94:0,15,307	0/0:26,0:26:59.87:0,60,491	0/0:12,0:10:23.96:0,24,197	0/0:25,0:26:67.95:0,68,548	0/0:20,0:21:49.96:0,50,400	0/0:33,0:33:61.14:0,61,664	0/0:17,0:18:46.98:0,47,375	0/0:22,0:22:38.87:0,39,320	0/0:25,0:27:55.75:0,56,444	0/0:5,0:4:11.98:0,12,98
chr10	95796008	.	TCACCAGCCTGTCAC	T	2858.90	PASS	AB=0.933;AC=25;AF=0.521;AN=48;BaseQRankSum=7.333;DP=580;FS=35.560;HRun=0;HaplotypeScore=217.8128;InbreedingCoeff=0.6461;MQ=78.14;MQ0=0;MQRankSum=-6.068;QD=10.28;ReadPosRankSum=0.410;VQSLOD=1.4095;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:21.07:0,21,1034	0/0:11,0:11:9.03:0,9,581	./.	./.	0/0:14,0:14:12.01:0,12,656	1/1:10,2:12:3.01:78,3,0	1/1:29,0:29:3.01:74,3,0	./.	0/0:27,0:27:30.10:0,30,1690	1/1:12,4:16:9.50:191,10,0	1/1:9,2:11:6.02:230,6,0	1/1:28,3:31:10.28:457,10,0	1/1:19,5:24:6.02:230,6,0	1/1:23,7:30:3.01:74,3,0	0/0:26,0:26:27.09:0,27,1565	0/0:26,0:26:33.11:0,33,1700	1/1:19,6:25:11.16:459,11,0	1/1:20,9:29:12.04:327,12,0	0/0:18,0:18:6.02:0,6,399	0/0:12,0:12:9.03:0,9,571	0/0:38,0:38:33.11:0,33,1619	./.	1/1:5,3:8:6.02:230,6,0	1/1:31,9:40:12.04:460,12,0	0/0:10,0:10:3.01:0,3,199	0/1:13,1:14:99:109,0,193	0/0:16,0:16:9.03:0,9,458	1/1:8,1:9:3.01:115,3,0
chr10	95797406	.	AC	A	387.11	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=3.126;DP=525;FS=14.971;HRun=1;HaplotypeScore=84.4492;InbreedingCoeff=0.4542;MQ=39.59;MQ0=48;MQRankSum=-1.267;QD=10.46;ReadPosRankSum=0.218;VQSLOD=0.2593;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,15:20:41.18:444,41,0	0/0:6,0:6:17.99:0,18,193	0/0:49,0:4:12.04:0,12,151	0/0:58,0:10:26.30:0,26,310	0/0:22,0:17:22.51:0,23,241	0/0:19,0:17:21.51:0,22,251	0/0:26,0:26:19.62:0,20,274	0/0:26,0:25:75.23:0,75,960	0/0:11,0:9:15.30:0,15,210	0/0:24,0:23:63.48:0,63,832	0/0:24,0:24:18.83:0,19,204	0/0:16,0:13:15.05:0,15,179	0/0:6,0:5:3.01:0,3,46	0/0:5,0:5:4.56:0,5,43	0/0:7,0:7:9.03:0,9,136	0/0:12,0:10:18.06:0,18,259	0/0:18,0:18:45.14:0,45,615	0/0:12,0:12:33.11:0,33,443	0/0:11,0:10:29.31:0,29,370	0/0:11,0:11:21.05:0,21,276	0/0:21,0:19:11.98:0,12,161	0/0:21,0:18:23.26:0,23,329	0/0:16,0:14:20.38:0,20,278	0/0:17,0:15:15.05:0,15,192	0/0:16,0:14:17.79:0,18,254	0/0:22,0:21:57.66:0,58,825	0/0:12,0:12:15.05:0,15,203	0/1:14,0:14:48.77:49,0,255
chr10	95797408	.	ACACACACACACACACACACAC	A	761.48	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=0.281;DP=527;FS=7.726;HRun=0;HaplotypeScore=183.5773;InbreedingCoeff=0.3034;MQ=39.28;MQ0=49;MQRankSum=-1.956;QD=13.60;ReadPosRankSum=-1.731;VQSLOD=1.5920;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,5:20:12.63:847,13,0	0/0:6,0:6:15.05:0,15,450	0/0:52,0:3:3.01:0,3,163	0/0:59,0:11:18.06:0,18,679	0/0:23,0:18:25.29:0,25,1064	0/1:18,0:16:0.52:1,0,715	0/0:26,0:26:11.15:0,11,310	0/0:26,0:25:68.24:0,68,2461	0/0:11,0:9:13.96:0,14,729	0/0:25,0:24:62.99:0,63,2328	0/0:24,0:24:17.71:0,18,552	0/0:15,0:12:9.03:0,9,540	0/0:6,0:5:3.01:0,3,200	0/0:5,0:5:4.84:0,5,222	0/0:7,0:7:9.03:0,9,544	0/0:12,0:10:15.05:0,15,1149	0/0:18,0:18:42.11:0,42,2704	0/0:13,0:13:36.04:0,36,2134	0/0:11,0:10:20.05:0,20,756	0/0:10,0:10:12.04:0,12,894	0/0:21,0:19:3.88:0,4,264	0/0:21,0:18:8.54:0,9,998	0/1:15,0:13:3.91:4,0,498	0/0:17,0:15:11.74:0,12,444	0/0:17,0:15:16.30:0,16,1146	0/0:22,0:21:49.41:0,49,2697	0/0:11,0:11:12.04:0,12,554	0/0:13,0:13:25.68:0,26,702
chr10	95797425	.	CA	C	457.04	PASS	AB=0.936;AC=11;AF=0.196;AN=56;BaseQRankSum=-1.252;DP=472;FS=8.261;HRun=1;HaplotypeScore=83.1361;InbreedingCoeff=0.0221;MQ=49.42;MQ0=38;MQRankSum=-0.258;QD=3.52;ReadPosRankSum=1.439;VQSLOD=-0.1252;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:5.28:0,5,95	0/1:3,3:6:27.04:71,0,27	0/0:40,0:5:3:0,3,37	0/0:43,1:12:13.10:0,13,252	0/1:23,0:18:27.54:28,0,93	0/0:17,0:15:17.77:0,18,154	0/0:19,0:19:6:0,6,59	0/0:27,0:26:75.03:0,75,873	1/1:10,0:8:2.97:10,3,0	0/0:22,0:21:57.92:0,58,641	0/0:24,0:24:12.52:0,13,68	0/0:15,0:12:6.02:0,6,66	0/0:8,0:7:3:0,3,35	0/0:5,0:5:5.38:0,5,44	0/1:8,0:8:7.86:49,0,8	0/0:13,0:11:11.29:0,11,81	0/0:16,0:16:42.13:0,42,550	0/0:12,0:12:33.08:0,33,418	0/1:15,1:13:88.40:94,0,88	0/0:10,0:10:10.69:0,11,48	0/1:22,0:20:11.04:11,0,76	0/0:19,0:16:17.92:0,18,221	0/0:13,0:11:11.41:0,11,90	0/0:15,0:14:9.02:0,9,109	0/1:15,1:14:7.29:77,0,7	0/1:18,0:17:91.37:226,0,91	1/1:11,0:11:0.74:28,1,0	0/0:12,0:12:14.96:0,15,138
chr10	95797426	.	A	ACACAC	2583.79	PASS	AB=0.895;AC=31;AF=0.554;AN=56;BaseQRankSum=-2.397;DP=472;FS=2.127;HRun=0;HaplotypeScore=98.3254;InbreedingCoeff=0.2712;MQ=49.45;MQ0=38;MQRankSum=0.942;QD=9.57;ReadPosRankSum=1.961;VQSLOD=2.5211;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:24.07:0,24,295	1/1:6,0:6:8.28:102,8,0	0/0:39,0:6:1.87:0,2,36	0/0:45,0:12:1.50:0,2,228	1/1:6,13:18:5.96:247,6,0	0/1:17,0:15:13.80:14,0,120	0/0:18,0:18:1.52:0,2,4	0/0:27,0:26:56.62:0,57,780	1/1:3,5:9:9.52:234,10,0	0/0:22,0:21:0.76:0,1,351	0/1:25,0:26:9.30:50,0,9	1/1:15,0:12:6.02:87,6,0	1/1:8,0:7:2.99:23,3,0	1/1:5,0:5:4.19:13,4,0	1/1:4,4:8:12.04:262,12,0	1/1:3,1:11:12.02:184,12,0	0/0:16,0:16:28.67:0,29,277	0/0:11,0:11:28.36:0,28,281	0/1:6,7:12:30.82:340,0,31	1/1:1,7:10:5.06:122,5,0	1/1:10,0:20:5.59:33,6,0	0/1:19,0:16:3.24:26,0,3	0/0:12,0:11:12.91:0,13,128	0/1:15,0:14:25.29:25,0,25	0/1:7,0:14:3.55:195,0,4	1/1:6,11:17:6.99:606,7,0	1/1:0,10:11:6.02:157,6,0	0/1:12,0:12:35.42:35,0,45
chr10	95797429	.	C	CACACACAA	3562.55	PASS	AB=0.934;AC=38;AF=0.679;AN=56;BaseQRankSum=-2.587;DP=467;FS=4.763;HRun=0;HaplotypeScore=110.3819;InbreedingCoeff=-0.0737;MQ=51.02;MQ0=37;MQRankSum=-1.164;QD=9.84;ReadPosRankSum=-0.041;VQSLOD=1.3587;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:74.76:96,0,75	0/1:5,0:6:2.78:3,0,75	0/0:43,0:7:4.12:0,4,29	0/0:44,0:12:0.98:0,1,114	0/1:23,0:18:24.30:24,0,88	1/1:16,0:15:23.41:196,23,0	1/1:2,7:19:2.88:15,3,0	1/1:26,0:25:48.80:555,49,0	0/1:11,0:9:12.72:22,0,13	1/1:20,0:19:51.45:621,51,0	1/1:6,14:26:17.04:247,17,0	1/1:2,1:12:6.02:254,6,0	1/1:1,0:8:3.01:68,3,0	1/1:4,0:4:10.92:95,11,0	1/1:6,0:7:8.96:92,9,0	0/1:12,0:11:36.01:41,0,36	0/1:12,0:16:99:130,0,103	0/1:7,0:11:51.95:52,0,65	0/1:15,0:12:24.19:24,0,99	0/1:12,0:12:2.14:2,0,121	0/0:17,0:16:2.91:0,3,19	1/1:16,0:15:28.14:384,28,0	1/1:13,0:11:23.24:147,23,0	1/1:14,0:13:11.97:104,12,0	0/1:14,0:14:84.77:114,0,85	0/1:17,0:17:55.18:55,0,156	0/1:12,0:12:15.96:16,0,16	1/1:3,5:11:11.46:205,11,0
chr10	95797919	.	G	GA	6005.29	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-11.527;DP=649;FS=0.682;HRun=9;HaplotypeScore=57.5817;InbreedingCoeff=0.9305;MQ=62.27;MQ0=7;MQRankSum=1.065;QD=23.28;ReadPosRankSum=0.204;VQSLOD=5.5200;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,936	1/1:1,11:12:30.08:332,30,0	0/0:6,0:5:0.17:0,0,51	0/0:9,0:6:0.93:0,1,53	1/1:3,22:25:36.81:603,37,0	0/0:22,0:22:50.94:0,51,436	0/0:33,0:33:83.95:0,84,725	0/0:34,0:34:77.61:0,78,666	1/1:3,23:26:39.96:652,40,0	0/0:25,0:24:59.92:0,60,509	0/0:16,0:16:35.90:0,36,301	0/0:26,0:25:65.98:0,66,571	0/0:25,0:25:65.04:0,65,559	0/0:18,0:18:41.95:0,42,364	1/1:8,20:27:48.13:531,48,0	1/1:3,18:20:48.13:531,48,0	0/0:28,0:28:80.96:0,81,699	0/0:21,0:21:59.97:0,60,516	1/1:5,17:22:48.03:490,48,0	1/1:2,13:15:33.09:363,33,0	1/1:2,30:33:69.91:747,70,0	0/0:29,0:29:77.42:0,77,640	0/0:19,0:17:41.75:0,42,339	0/0:26,0:25:68.98:0,69,596	1/1:1,14:15:30:316,30,0	1/1:3,30:33:44.09:910,44,0	1/1:3,25:28:48.13:531,48,0	0/0:14,0:14:32.97:0,33,286
chr10	95798875	.	TA	T	834.29	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.069;DP=357;FS=23.177;HRun=8;HaplotypeScore=38.1461;InbreedingCoeff=0.9334;MQ=67.08;MQ0=1;MQRankSum=-3.248;QD=21.39;ReadPosRankSum=1.094;VQSLOD=1.9737;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.24:0,81,965	0/0:3,0:3:9.03:0,9,108	0/0:10,0:10:20.08:0,20,218	0/0:12,0:12:17.27:0,17,187	0/0:16,0:16:45.14:0,45,543	0/0:8,0:8:18.06:0,18,217	0/0:11,0:11:27.08:0,27,326	0/0:27,0:27:69.19:0,69,813	0/0:7,0:7:21.06:0,21,253	0/0:14,0:14:33.10:0,33,396	0/0:15,0:15:39.11:0,39,461	0/0:8,0:8:21.05:0,21,243	0/0:16,0:16:48.15:0,48,579	0/0:9,0:9:27.08:0,27,326	0/0:13,0:13:39.12:0,39,468	0/0:7,0:7:15.05:0,15,181	1/1:1,16:17:45.07:434,45,0	1/1:2,20:22:54.08:521,54,0	0/0:17,0:17:47.99:0,48,535	0/0:14,0:14:36.11:0,36,434	0/0:7,0:7:15.03:0,15,169	0/0:8,0:8:18.06:0,18,217	0/0:11,0:11:30.09:0,30,362	0/0:9,0:9:24.07:0,24,289	0/0:14,0:14:39.12:0,39,468	0/0:14,0:14:42.13:0,42,507	0/0:11,0:11:27.08:0,27,326	0/0:8,0:8:24.07:0,24,290
chr10	95798975	.	AAC	A	987.43	PASS	AC=16;AF=0.333;AN=48;BaseQRankSum=-1.069;DP=181;FS=9.525;HRun=0;HaplotypeScore=48.6200;InbreedingCoeff=0.6663;MQ=69.40;MQ0=0;MQRankSum=-1.988;QD=17.63;ReadPosRankSum=2.011;VQSLOD=2.5675;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,17:27:45.10:513,45,0	1/1:1,0:1:3:28,3,0	0/0:8,0:5:2.04:0,2,6	0/0:10,0:6:2.88:0,3,15	1/1:1,6:7:9.03:109,9,0	0/0:6,0:11:6:0,6,53	0/0:4,0:5:5.99:0,6,50	0/0:6,0:23:51.01:0,51,496	./.	0/0:4,0:5:9:0,9,79	0/0:3,0:6:9:0,9,79	0/0:6,0:7:14.99:0,15,144	0/0:4,0:6:12.01:0,12,128	0/0:2,0:3:6:0,6,51	1/1:3,0:3:3:25,3,0	./.	0/0:8,0:8:6.35:0,6,36	0/0:3,0:5:8.93:0,9,66	1/1:0,5:5:15.04:171,15,0	1/1:2,3:5:9.03:109,9,0	./.	0/0:1,0:1:3:0,3,25	0/0:1,0:2:3:0,3,26	0/0:7,0:7:14.97:0,15,121	./.	1/1:0,3:3:8.94:90,9,0	1/1:1,4:5:9.03:107,9,0	0/0:8,0:11:29.86:0,30,234
chr10	95799001	.	TAC	T	209.32	PASS	AB=1.000;AC=16;AF=0.320;AN=50;BaseQRankSum=-3.114;DP=158;FS=47.199;HRun=0;HaplotypeScore=55.8360;InbreedingCoeff=-0.0299;MQ=63.37;MQ0=1;MQRankSum=-2.094;QD=2.41;ReadPosRankSum=-2.531;VQSLOD=-0.4396;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:2.98:0,3,41	0/1:3,0:3:3.63:19,0,4	0/1:6,0:1:0:0,0,0	0/0:13,0:9:1.38:0,1,15	0/1:6,0:6:12.73:13,0,26	0/0:6,0:6:0.36:0,0,8	0/0:1,0:1:0.89:0,1,2	0/1:20,0:19:52.74:53,0,120	1/1:1,0:1:3:25,3,0	0/1:4,0:4:4.34:15,0,4	0/0:4,4:7:6.86:0,7,47	0/1:4,0:4:14.54:15,0,18	0/0:4,0:4:3.86:0,4,23	0/0:1,0:1:0.89:0,1,2	./.	0/1:1,0:1:0:0,0,0	1/1:14,0:14:8.88:60,9,0	0/0:5,0:5:2.94:0,3,25	0/0:7,0:6:14.17:0,14,91	0/1:4,0:4:13.61:14,0,27	./.	./.	0/0:1,0:1:2.98:0,3,22	0/0:1,0:1:2.92:0,3,17	0/1:5,0:5:0:0,0,0	0/1:6,0:6:10.75:44,0,11	0/1:8,0:8:1.66:43,0,2	0/1:5,0:5:15.98:30,0,16
chr10	95799004	.	ATATG	A	804.10	PASS	AB=0.902;AC=24;AF=0.480;AN=50;BaseQRankSum=0.955;DP=152;FS=37.104;HRun=0;HaplotypeScore=53.3354;InbreedingCoeff=-0.1121;MQ=66.67;MQ0=1;MQRankSum=0.080;QD=6.70;ReadPosRankSum=-0.229;VQSLOD=0.0324;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:23:29.86:329,30,0	0/0:4,0:4:9.01:0,9,103	0/1:6,0:2:0:0,0,0	0/0:11,0:8:3.10:0,3,75	0/1:5,0:5:17.95:18,0,43	0/1:5,1:6:22.07:22,0,26	1/1:0,1:1:3:25,3,0	0/1:16,2:17:94.46:214,0,94	0/0:1,0:1:3.01:0,3,49	1/1:3,1:4:3:28,3,0	1/1:6,1:6:2.76:25,3,0	0/1:1,1:2:15.44:19,0,15	0/1:3,1:4:19.01:19,0,29	1/1:0,1:1:3:25,3,0	./.	0/0:1,0:1:3.01:0,3,73	1/1:14,0:14:6.34:37,6,0	0/0:5,0:5:2.72:0,3,22	0/1:7,0:6:38.23:89,0,38	0/1:5,0:5:37.93:38,0,38	0/0:1,0:1:3:0,3,25	./.	./.	0/1:1,0:1:0:0,0,0	0/0:6,0:6:6.02:0,6,123	0/1:6,0:6:30.89:31,0,98	0/1:7,0:7:5.66:6,0,127	0/1:1,2:3:18.16:18,0,27
chr10	95799006	.	ATG	A	912.11	PASS	AB=1.000;AC=28;AF=0.560;AN=50;BaseQRankSum=3.317;DP=151;FS=69.701;HRun=0;HaplotypeScore=49.3705;InbreedingCoeff=0.1378;MQ=69.74;MQ0=1;MQRankSum=-0.763;QD=7.66;ReadPosRankSum=0.922;VQSLOD=0.2515;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,7:20:29.88:261,30,0	0/0:5,0:5:11.04:0,11,106	1/1:7,0:3:2.04:6,2,0	0/0:12,0:8:8.21:0,8,58	0/1:5,0:5:11.97:12,0,63	1/1:6,0:6:0.46:24,0,0	1/1:1,0:1:3:25,3,0	1/1:17,0:16:16.59:264,17,0	0/0:1,0:1:3:0,3,25	1/1:4,0:4:3.47:29,3,0	1/1:6,0:5:5.95:49,6,0	1/1:2,0:2:5.99:50,6,0	0/1:4,0:4:3.67:20,0,4	1/1:1,0:1:3:25,3,0	./.	0/0:1,0:1:3.01:0,3,48	1/1:14,0:14:8.88:60,9,0	0/0:5,0:5:0.21:0,0,1	0/1:7,0:6:15.77:114,0,16	0/1:6,0:6:56.66:57,0,57	0/0:1,0:1:3:0,3,25	./.	./.	0/1:1,0:1:0:0,0,0	0/0:6,0:6:6.02:0,6,99	0/1:7,0:7:27.89:28,0,104	0/1:8,0:8:14.24:14,0,101	0/1:3,0:3:1.99:19,0,2
chr10	95799014	.	ATATATAGATCC	A	398.61	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=3.814;DP=156;FS=0.000;HRun=0;HaplotypeScore=64.5870;InbreedingCoeff=0.3756;MQ=79.03;MQ0=1;MQRankSum=-3.775;QD=24.91;ReadPosRankSum=2.244;VQSLOD=2.1511;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,7:16:16.82:487,17,0	0/0:5,0:5:15.01:0,15,556	0/0:9,0:6:14.93:0,15,581	0/0:11,0:9:12.03:0,12,339	0/0:6,0:6:15.05:0,15,788	0/0:7,0:7:9.02:0,9,211	./.	0/0:18,0:17:45.15:0,45,1354	0/0:2,0:2:6.02:0,6,302	0/0:3,0:3:9.03:0,9,201	0/0:6,0:6:9.03:0,9,228	0/0:3,0:3:9.03:0,9,210	0/0:4,0:4:9.03:0,9,292	0/0:1,0:1:0:0,0,0	./.	0/0:1,0:1:3.01:0,3,178	0/0:14,0:14:23.71:0,24,571	0/0:7,0:7:12.04:0,12,394	0/0:6,0:5:15.04:0,15,506	0/0:6,0:6:18.06:0,18,746	0/0:5,0:5:15.05:0,15,626	0/0:1,0:1:3.01:0,3,67	0/0:1,0:1:3.01:0,3,67	0/0:1,0:1:3.01:0,3,74	0/0:7,0:7:9.03:0,9,487	0/0:5,0:5:12.04:0,12,657	0/0:7,0:7:17.85:0,18,695	0/0:1,0:1:3.01:0,3,101
chr10	95799020	.	AGATCC	A	220.26	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=3.886;DP=164;FS=0.000;HRun=0;HaplotypeScore=50.2677;InbreedingCoeff=0.2560;MQ=84.18;MQ0=0;MQRankSum=-3.325;QD=11.01;ReadPosRankSum=3.827;VQSLOD=1.4470;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,6:14:15.05:293,15,0	0/0:5,0:5:14.22:0,14,327	0/0:12,0:10:26.28:0,26,727	0/0:11,0:9:12.02:0,12,257	0/0:7,0:7:18.06:0,18,583	0/0:5,0:5:9.03:0,9,130	0/0:1,0:1:3.01:0,3,44	0/0:17,0:16:48.12:0,48,826	0/0:2,0:2:6.02:0,6,200	0/0:4,0:4:12.04:0,12,187	0/0:7,0:7:9.03:0,9,160	0/0:5,0:5:12.04:0,12,196	0/0:4,0:4:9.03:0,9,192	0/0:1,0:1:3.01:0,3,43	0/0:4,0:4:6.02:0,6,184	0/0:3,0:3:9.03:0,9,283	0/0:13,0:13:26.76:0,27,596	0/0:6,0:6:15.05:0,15,458	0/0:5,0:5:15.05:0,15,479	0/0:5,0:5:15.05:0,15,488	0/0:5,0:5:15.05:0,15,480	0/0:2,0:2:6.02:0,6,85	0/0:1,0:1:3.01:0,3,43	0/0:3,0:3:9.03:0,9,130	0/0:7,0:7:9.03:0,9,300	0/0:6,0:6:15.05:0,15,494	0/1:6,0:6:27.03:27,0,383	0/0:2,0:2:6.01:0,6,61
chr10	95800452	.	T	TAAAC	2343.55	PASS	AC=22;AF=0.478;AN=46;BaseQRankSum=-6.201;DP=498;FS=0.000;HRun=0;HaplotypeScore=45.6761;InbreedingCoeff=0.7457;MQ=23.39;MQ0=229;MQRankSum=0.370;QD=11.90;ReadPosRankSum=-1.156;VQSLOD=2.1376;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:10:12:0,12,151	0/0:7,0:4:3.01:0,3,48	./.	./.	./.	1/1:6,15:10:15.05:360,15,0	1/1:7,6:4:3.01:72,3,0	1/1:11,5:5:9.03:176,9,0	0/0:18,0:11:9.03:0,9,133	1/1:11,10:14:18.02:336,18,0	1/1:8,18:20:12.04:288,12,0	1/1:4,12:13:12.30:289,12,0	1/1:5,5:5:3.01:72,3,0	1/1:6,10:11:14.91:351,15,0	0/0:17,0:8:6.02:0,6,97	0/0:33,0:21:35.84:0,36,521	./.	0/0:6,0:3:2.04:0,2,6	0/0:12,0:6:9.03:0,9,132	0/0:33,0:24:32.98:0,33,434	0/0:10,0:1:3.01:0,3,34	1/1:6,9:11:9.03:216,9,0	1/1:6,13:10:5.95:144,6,0	1/1:6,10:5:9.03:216,9,0	0/0:27,0:19:23.91:0,24,373	0/0:19,0:12:20.43:0,20,294	0/0:15,0:6:15.02:0,15,215	./.
chr10	95804463	.	CAAG	C	1542.92	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.715;DP=702;FS=7.895;HRun=0;HaplotypeScore=98.0159;InbreedingCoeff=0.9998;MQ=83.32;MQ0=0;MQRankSum=-2.899;QD=37.63;ReadPosRankSum=4.121;VQSLOD=4.5240;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,166,3513	0/0:18,0:18:45.15:0,45,1005	0/0:21,0:21:57.13:0,57,1071	0/0:27,0:27:72.05:0,72,1309	0/0:31,0:31:81.24:0,81,1683	0/0:34,0:34:96.31:0,96,2023	0/0:26,0:26:72.23:0,72,1495	0/0:26,0:26:75.24:0,75,1598	0/0:24,0:24:69.22:0,69,1473	0/0:32,0:32:90.31:0,90,2010	0/0:15,0:15:36.11:0,36,747	0/0:26,0:26:75.26:0,75,1670	0/0:13,0:13:36.12:0,36,804	0/0:15,0:15:42.14:0,42,937	0/0:28,0:28:84.26:0,84,1772	0/0:26,0:26:69.24:0,69,1541	1/1:1,21:22:60.20:979,60,0	1/1:2,17:19:42.14:686,42,0	0/0:28,0:28:81.26:0,81,1665	0/0:21,0:21:63.20:0,63,1365	0/0:22,0:22:60.16:0,60,1212	0/0:16,0:16:45.14:0,45,961	0/0:30,0:30:87.27:0,87,1800	0/0:23,0:23:63.22:0,63,1389	0/0:20,0:20:57.20:0,57,1239	0/0:32,0:32:96.32:0,96,2105	0/0:27,0:27:81.27:0,81,1764	0/0:23,0:23:69.24:0,69,1499
chr10	95804644	.	G	GCTACATTCTATTCTGC	4895.97	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.190;DP=716;FS=5.259;HRun=0;HaplotypeScore=294.7479;InbreedingCoeff=0.9828;MQ=87.02;MQ0=0;MQRankSum=-8.156;QD=97.92;ReadPosRankSum=-1.019;VQSLOD=3.5014;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,126,4937	0/0:9,0:9:27.09:0,27,1034	0/0:30,0:30:54.14:0,54,1278	0/0:28,0:28:48.13:0,48,1052	0/0:25,0:25:69.22:0,69,2680	0/0:30,0:30:78.24:0,78,2930	0/0:26,0:26:63.20:0,63,2327	0/0:25,0:25:30.56:0,31,944	0/0:21,0:21:42.14:0,42,1736	0/0:22,0:22:57.20:0,57,2322	0/0:17,0:17:36.12:0,36,1578	0/0:22,0:22:48.16:0,48,1813	0/0:24,0:24:57.20:0,57,2206	0/0:19,0:19:48.13:0,48,1728	0/0:34,0:34:87.28:0,87,3498	0/0:22,0:22:57.18:0,57,2204	1/1:29,7:40:57.20:3821,57,0	1/1:8,2:10:15.05:1075,15,0	0/0:29,0:29:39.07:0,39,1059	0/0:28,0:28:66.21:0,66,2578	0/0:39,0:39:87.24:0,87,3041	0/0:26,0:26:57.20:0,57,2128	0/0:17,0:17:42.13:0,42,1460	0/0:32,0:32:93.28:0,93,3654	0/0:17,0:17:39.09:0,39,1279	0/0:33,0:33:75.26:0,75,3130	0/0:26,0:26:57.18:0,57,2203	0/0:8,0:8:15.05:0,15,630
chr10	95806738	.	G	GT	3555.73	PASS	AB=0.715;AC=39;AF=0.696;AN=56;BaseQRankSum=-3.756;DP=503;FS=0.626;HRun=14;HaplotypeScore=74.4083;InbreedingCoeff=-0.0838;MQ=73.42;MQ0=1;MQRankSum=1.172;QD=7.26;ReadPosRankSum=-1.198;VQSLOD=2.4495;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:40.65:74,0,41	1/1:2,7:9:14.95:122,15,0	0/1:19,0:17:3.34:3,0,18	0/0:8,0:7:7.93:0,8,43	0/1:10,14:25:22.39:179,0,22	0/1:11,9:20:33.81:108,0,34	1/1:5,5:10:15.45:129,15,0	0/1:13,9:22:6.29:145,0,6	1/1:7,1:14:8.68:55,9,0	1/1:8,15:24:25.67:333,26,0	0/1:9,17:26:13.95:241,0,14	1/1:9,17:26:8.79:164,9,0	0/1:3,5:9:10.31:36,0,10	0/1:2,13:16:4:70,0,4	0/1:8,11:20:29.93:129,0,30	1/1:6,16:24:18.24:167,18,0	0/1:7,0:7:0:0,0,0	0/0:5,0:5:2.03:0,2,6	1/1:9,8:20:9.23:168,9,0	1/1:5,16:22:41.56:318,42,0	1/1:4,4:8:0.79:116,1,0	0/1:6,15:21:14.45:140,0,14	0/1:6,5:11:24.63:42,0,25	1/1:7,13:20:21.75:208,22,0	1/1:9,17:26:3.55:136,4,0	1/1:9,9:19:17.76:127,18,0	0/1:12,21:33:2.60:220,0,3	1/1:3,5:9:11.16:126,11,0
chr10	95808398	.	TA	T	912.51	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.853;DP=579;FS=0.721;HRun=1;HaplotypeScore=54.5867;InbreedingCoeff=0.9735;MQ=66.49;MQ0=0;MQRankSum=-0.673;QD=24.66;ReadPosRankSum=1.655;VQSLOD=3.6152;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1535	0/0:7,0:7:21.03:0,21,247	0/0:11,0:7:18.03:0,18,210	0/0:7,0:7:10.87:0,11,103	0/0:30,0:30:87.21:0,87,1088	0/0:27,0:27:81.19:0,81,1008	0/0:18,0:18:54.16:0,54,698	0/0:39,0:39:99:0,113,1301	0/0:21,0:21:63.18:0,63,804	0/0:21,0:21:63.20:0,63,824	0/0:29,0:29:81.19:0,81,999	0/0:21,0:21:63.18:0,63,806	0/0:20,0:20:60.12:0,60,710	0/0:23,0:23:69.20:0,69,883	0/0:18,0:18:54.12:0,54,650	0/0:15,0:15:45.11:0,45,553	1/1:3,19:22:38.20:578,38,0	1/1:0,15:15:36.02:456,36,0	0/0:28,0:28:81.19:0,81,1014	0/0:22,0:22:66.01:0,66,849	0/0:19,0:19:50.94:0,51,537	0/0:10,0:10:30.09:0,30,384	0/0:12,0:12:36.12:0,36,478	0/0:18,0:18:54:0,54,624	0/0:21,0:21:58.13:0,58,747	0/0:20,0:20:60.08:0,60,715	0/0:29,0:29:87.09:0,87,1031	0/0:16,0:16:48.11:0,48,584
chr10	95809087	.	TAC	T	1378.66	PASS	AB=0.802;AC=29;AF=0.558;AN=52;BaseQRankSum=0.275;DP=472;FS=0.000;HRun=0;HaplotypeScore=83.5028;InbreedingCoeff=0.5214;MQ=54.07;MQ0=8;MQRankSum=0.443;QD=5.43;ReadPosRankSum=2.726;VQSLOD=2.4703;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:25:17.04:84,17,0	0/0:6,0:6:3:0,3,26	./.	./.	0/0:7,0:13:2.99:0,3,24	1/1:6,7:13:3.01:33,3,0	1/1:16,2:19:17.84:160,18,0	1/1:10,0:9:2.69:9,3,0	0/0:14,0:13:1.61:0,2,24	1/1:8,9:17:20.59:220,21,0	1/1:6,5:12:8.86:81,9,0	1/1:5,1:10:8.86:78,9,0	1/1:6,13:19:18.05:200,18,0	1/1:6,6:12:18.05:199,18,0	0/0:20,0:21:6.46:0,6,49	0/0:19,0:18:4.35:0,4,28	1/1:9,0:18:5.68:28,6,0	0/1:7,0:14:12.80:19,0,13	0/0:21,0:18:26.96:0,27,247	0/1:10,0:10:0.06:0,0,0	0/0:9,0:16:6:0,6,53	0/1:13,7:19:33.25:88,0,33	1/1:5,3:8:6.02:67,6,0	1/1:16,12:27:20.79:212,21,0	0/0:11,0:11:8.99:0,9,90	0/0:22,0:20:18.75:0,19,251	0/0:16,0:27:6.31:0,6,66	1/1:9,0:19:1.23:73,1,0
chr10	95809122	.	A	ACACACACA	1278.69	PASS	AB=1.000;AC=24;AF=0.480;AN=50;BaseQRankSum=-4.736;DP=538;FS=3.992;HRun=0;HaplotypeScore=133.7023;InbreedingCoeff=0.3210;MQ=51.19;MQ0=18;MQRankSum=0.594;QD=4.70;ReadPosRankSum=-5.361;VQSLOD=0.5624;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:17.08:0,17,287	1/1:8,0:8:6.01:92,6,0	./.	./.	./.	0/0:19,0:19:3.01:0,3,56	0/0:19,0:18:10.93:0,11,172	1/1:26,0:23:2.89:20,3,0	1/1:6,7:13:4.82:74,5,0	0/1:25,0:25:21.48:21,0,216	0/0:12,0:12:9.03:0,9,167	0/1:18,0:18:11.53:12,0,102	0/0:21,0:21:17.29:0,17,293	0/0:18,0:18:18.06:0,18,315	0/1:19,0:18:0:0,0,0	1/1:16,0:15:5.98:47,6,0	0/0:20,0:20:6.02:0,6,106	0/1:15,0:15:11.97:12,0,120	1/1:25,0:22:16.30:356,16,0	1/1:10,0:10:0.47:1,0,0	1/1:16,0:16:6.46:50,6,0	0/0:11,0:11:12.04:0,12,217	0/0:11,0:11:6.02:0,6,112	0/0:25,0:24:0.65:0,1,293	1/1:13,0:13:12.01:214,12,0	0/1:23,0:23:28.76:359,0,29	1/1:25,0:24:7.34:147,7,0	0/1:19,0:19:33.26:33,0,354
chr10	95809380	.	T	TA	680.39	PASS	AB=0.964;AC=8;AF=0.143;AN=56;BaseQRankSum=3.169;DP=318;FS=26.354;HRun=11;HaplotypeScore=41.8481;InbreedingCoeff=0.6368;MQ=61.63;MQ0=2;MQRankSum=-0.616;QD=9.45;ReadPosRankSum=0.753;VQSLOD=0.4682;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:35.29:225,35,0	0/0:4,0:4:11.95:0,12,93	0/0:8,0:9:2.33:0,2,80	0/0:9,0:3:2.84:0,3,14	0/1:12,1:13:3.58:4,0,159	0/0:12,0:12:20.91:0,21,163	0/0:5,0:4:11.95:0,12,93	0/0:40,0:40:80.62:0,81,626	0/0:6,0:6:17.92:0,18,137	0/0:13,0:14:31.90:0,32,237	0/0:9,0:9:16.25:0,16,136	0/0:6,0:7:16.95:0,17,120	0/1:2,0:2:0:0,0,0	0/0:6,0:6:14.92:0,15,114	0/0:3,0:3:8.97:0,9,70	0/0:13,0:14:41.50:0,42,309	1/1:1,16:17:33.07:335,33,0	1/1:5,14:19:6.82:251,7,0	0/0:12,0:12:20.91:0,21,162	0/0:10,0:10:20.91:0,21,163	0/0:5,0:5:14.94:0,15,114	0/0:1,0:1:2.99:0,3,23	0/0:10,0:10:23.89:0,24,183	0/0:4,0:4:8.96:0,9,70	0/0:6,0:6:14.93:0,15,115	0/0:22,0:23:43.84:0,44,331	0/0:17,0:19:42.92:0,43,312	0/0:17,1:17:17.55:0,18,318
chr10	95809390	.	A	AG	396.14	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=5.538;DP=350;FS=20.658;HRun=0;HaplotypeScore=45.0874;InbreedingCoeff=0.3670;MQ=62.11;MQ0=0;MQRankSum=-0.272;QD=6.95;ReadPosRankSum=3.297;VQSLOD=1.7214;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:36.12:475,36,0	0/0:7,0:7:21.01:0,21,240	0/0:11,0:11:27.10:0,27,237	0/0:3,0:1:2.92:0,3,17	0/0:19,0:19:48.86:0,49,554	0/0:10,0:10:27.07:0,27,344	0/0:6,0:5:15.04:0,15,192	0/0:44,0:44:99:0,123,1413	0/0:7,0:7:18.06:0,18,249	0/0:13,0:13:35.90:0,36,455	0/0:13,0:13:35.97:0,36,402	0/0:9,0:9:26.85:0,27,301	0/0:6,0:6:15:0,15,132	0/0:6,0:6:18.05:0,18,236	0/0:6,0:6:15.03:0,15,176	0/0:15,0:15:42.07:0,42,558	0/1:18,0:18:22.28:22,0,26	0/1:19,0:19:11.68:12,0,87	0/0:14,0:14:33.07:0,33,379	0/0:12,0:12:27.07:0,27,343	0/0:6,0:6:18.05:0,18,233	0/0:1,0:1:3.01:0,3,42	0/0:12,0:12:30.09:0,30,400	0/0:5,0:5:15.03:0,15,166	0/0:8,0:8:24.05:0,24,279	0/0:25,0:25:66.01:0,66,774	0/0:18,0:18:50.69:0,51,608	0/0:17,0:17:42.41:0,42,612
chr10	95809712	.	C	CTT	1711.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.445;DP=599;FS=1.529;HRun=0;HaplotypeScore=70.4542;InbreedingCoeff=0.9993;MQ=72.11;MQ0=0;MQRankSum=-3.430;QD=47.55;ReadPosRankSum=1.344;VQSLOD=4.9343;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,31:36:90.31:1807,90,0	0/0:11,0:11:33.03:0,33,499	0/0:14,0:14:39.10:0,39,587	0/0:27,0:27:78.26:0,78,1226	0/0:23,0:23:66.21:0,66,1051	0/0:21,0:21:57.19:0,57,919	0/0:23,0:23:66.19:0,66,1043	0/0:32,0:32:93.21:0,93,1390	0/0:19,0:19:57.19:0,57,929	0/0:18,0:18:51.17:0,51,830	0/0:20,0:20:57.19:0,57,922	0/0:30,0:30:90.31:0,90,1463	0/0:22,0:22:63.19:0,63,979	0/0:15,0:15:45.14:0,45,703	0/0:22,0:22:60.19:0,60,951	0/0:24,0:24:72.23:0,72,1150	0/0:28,0:28:78.27:0,78,1271	0/0:26,0:26:78.22:0,78,1240	0/0:17,0:17:48.10:0,48,723	0/0:17,0:17:48.15:0,48,756	0/0:17,0:17:51.17:0,51,831	0/0:11,0:11:33.07:0,33,506	0/0:22,0:22:63.21:0,63,1021	0/0:16,0:16:48.16:0,48,776	0/0:14,0:14:39.13:0,39,632	0/0:27,0:27:81.28:0,81,1313	0/0:26,0:26:72.25:0,72,1173	0/0:21,0:21:63.21:0,63,1010
chr10	95811277	.	G	GCTTCCAAGTTCAACAAGTT	6795.34	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.583;DP=700;FS=8.954;HRun=0;HaplotypeScore=335.6431;InbreedingCoeff=0.9953;MQ=85.37;MQ0=0;MQRankSum=-9.044;QD=205.92;ReadPosRankSum=-0.222;VQSLOD=4.1103;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,117,5685	0/0:11,0:11:30.09:0,30,1451	0/0:26,0:26:66.17:0,66,2372	0/0:20,0:21:45.05:0,45,1531	0/0:20,0:20:54.18:0,54,2234	0/0:16,0:16:48.15:0,48,2173	0/0:30,0:30:81.26:0,81,3552	0/0:24,0:24:69.19:0,69,2662	0/0:30,0:30:84.27:0,84,3931	0/0:31,0:31:72.24:0,72,3324	0/0:13,0:13:39.12:0,39,1824	0/0:29,0:29:78.23:0,78,3759	0/0:30,0:30:87.28:0,87,4310	0/0:28,0:28:84.29:0,84,4102	0/0:43,0:43:99:0,123,5894	0/0:32,0:32:90.27:0,90,4067	1/1:16,4:21:54.14:3911,54,0	1/1:8,3:12:33.11:2884,33,0	0/0:16,0:16:42.14:0,42,1804	0/0:21,0:21:54.19:0,54,2582	0/0:45,0:45:99:0,126,6130	0/0:18,0:18:54.19:0,54,2563	0/0:13,0:13:36.11:0,36,1575	0/0:29,0:29:81.26:0,81,4072	0/0:28,0:28:81.28:0,81,4259	0/0:29,0:29:84.29:0,84,4323	0/0:33,0:33:84.27:0,84,4023	0/0:8,0:8:18.06:0,18,862
chr10	95813022	.	GC	G	8775.40	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=9.014;DP=620;FS=4.272;HRun=1;HaplotypeScore=69.1693;InbreedingCoeff=0.9985;MQ=83.08;MQ0=0;MQRankSum=-2.236;QD=36.87;ReadPosRankSum=2.293;VQSLOD=5.4582;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1774	0/0:10,0:10:27.09:0,27,432	0/0:20,0:20:60.10:0,60,916	0/0:19,0:19:54.15:0,54,821	0/0:16,0:16:45.14:0,45,695	1/1:0,21:21:63.21:880,63,0	1/1:0,21:21:57.19:797,57,0	1/1:0,36:36:99:1461,108,0	0/0:16,0:16:39.03:0,39,597	1/1:0,12:12:36.12:504,36,0	1/1:0,19:19:51.17:713,51,0	1/1:0,26:25:66.22:920,66,0	1/1:0,15:15:33.03:440,33,0	1/1:0,23:23:54.18:755,54,0	0/0:25,0:25:75.24:0,75,1175	0/0:21,0:21:60.20:0,60,957	0/0:39,0:39:99:0,114,1817	0/0:30,0:30:90.31:0,90,1438	0/0:29,0:29:87.29:0,87,1364	0/0:20,0:20:60.19:0,60,936	0/0:39,0:39:99:0,105,1651	1/1:0,16:16:42.14:587,42,0	1/1:0,6:6:18.06:251,18,0	1/1:0,31:31:78.26:1090,78,0	0/0:21,0:21:63.21:0,63,1007	0/0:19,0:19:57.17:0,57,869	0/0:20,0:20:57.12:0,57,855	1/1:0,12:12:27.09:378,27,0
chr10	95813123	.	T	TC	1271.75	PASS	AB=0.950;AC=17;AF=0.304;AN=56;BaseQRankSum=-4.945;DP=559;FS=85.451;HRun=0;HaplotypeScore=77.3363;InbreedingCoeff=0.1304;MQ=43.91;MQ0=65;MQRankSum=8.314;QD=4.59;ReadPosRankSum=3.712;VQSLOD=0.1097;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:34:77.98:0,78,535	0/0:8,0:6:12.50:0,13,74	0/1:22,0:6:1.57:2,0,27	0/1:26,0:3:4.49:4,0,20	0/0:25,0:22:53.57:0,54,348	0/1:21,0:17:24.88:25,0,44	0/1:20,0:18:27.50:125,0,27	0/1:23,15:31:84.34:272,0,84	0/0:15,0:14:36:0,36,235	1/1:20,1:19:29.72:286,30,0	0/1:13,2:14:7.99:125,0,8	0/1:20,0:18:43.81:100,0,44	0/1:10,0:9:29.61:56,0,30	0/1:19,0:16:74.48:74,0,110	0/0:16,0:15:33.71:0,34,233	0/0:9,0:8:10.15:0,10,67	0/0:28,0:19:38.19:0,38,238	0/0:29,0:23:57.09:0,57,368	0/0:23,0:18:50.39:0,50,367	0/0:19,0:18:39.35:0,39,280	0/0:7,0:6:11.37:0,11,66	1/1:13,0:12:26.77:175,27,0	1/1:8,0:7:9.24:73,9,0	0/1:28,0:22:47.42:47,0,106	0/0:26,0:24:56.49:0,56,402	0/0:20,0:17:48.82:0,49,338	0/0:19,0:18:42.07:0,42,255	0/1:14,1:11:4.58:79,0,5
chr10	95816928	.	A	AG	3686.96	PASS	AB=0.731;AC=41;AF=0.732;AN=56;BaseQRankSum=-1.442;DP=568;FS=1.215;HRun=10;HaplotypeScore=113.3019;InbreedingCoeff=0.3602;MQ=77.95;MQ0=10;MQRankSum=-2.336;QD=8.86;ReadPosRankSum=4.586;VQSLOD=2.3165;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:9.73:32,10,0	1/1:3,3:8:11.61:98,12,0	0/0:77,0:40:34.52:0,35,327	0/0:45,0:20:19.51:0,20,197	1/1:7,7:17:23.30:198,23,0	1/1:10,4:14:10.13:117,10,0	0/1:8,9:17:24.87:155,0,25	0/0:20,0:20:35.93:0,36,292	1/1:4,15:23:37.82:364,38,0	0/1:10,8:18:9.68:79,0,10	1/1:8,5:14:14.95:140,15,0	0/1:5,15:23:13.37:247,0,13	1/1:9,4:24:17.08:86,17,0	1/1:11,7:19:5.09:225,5,0	1/1:7,10:18:15.76:143,16,0	1/1:8,9:21:32.93:317,33,0	1/1:20,1:21:42.30:221,42,0	0/1:14,0:14:8.38:39,0,8	0/1:8,6:14:5.05:127,0,5	1/1:11,7:18:11.95:112,12,0	0/1:11,11:22:4.62:129,0,5	1/1:7,6:13:11.95:112,12,0	0/1:13,2:16:15.58:36,0,16	1/1:4,10:15:30.04:306,30,0	1/1:10,3:16:15.31:125,15,0	1/1:7,7:14:14.93:129,15,0	1/1:8,8:17:14.73:147,15,0	0/0:9,0:9:17.96:0,18,148
chr10	95816938	.	GAGGAA	G	699.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.524;DP=503;FS=5.293;HRun=0;HaplotypeScore=116.2877;InbreedingCoeff=0.9558;MQ=82.16;MQ0=5;MQRankSum=-5.171;QD=29.13;ReadPosRankSum=-0.831;VQSLOD=2.8502;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:24:39.13:794,39,0	0/0:9,0:9:24.55:0,25,599	0/0:59,0:33:72.62:0,73,1620	0/0:39,0:21:54.46:0,54,1080	0/0:15,0:15:39.13:0,39,863	0/0:12,0:12:30.10:0,30,806	0/0:11,0:11:24.08:0,24,570	0/0:25,0:25:75.26:0,75,2010	0/0:20,0:20:42.14:0,42,944	0/0:12,0:12:24.08:0,24,615	0/0:13,0:13:36.12:0,36,910	0/0:24,0:24:51.17:0,51,1285	0/0:21,0:21:33.11:0,33,782	0/0:14,0:14:33.11:0,33,829	0/0:15,0:15:30.10:0,30,756	0/0:19,0:19:51.18:0,51,1269	0/0:18,0:18:54.19:0,54,1501	0/0:10,0:10:27.09:0,27,720	0/0:17,0:17:50.76:0,51,1261	0/0:18,0:18:41.65:0,42,1056	0/0:21,0:21:45.15:0,45,1051	0/0:9,0:9:21.07:0,21,531	0/0:11,0:11:24.08:0,24,641	0/0:16,0:16:39.13:0,39,936	0/0:15,0:15:13.74:0,14,816	0/0:14,0:14:33.11:0,33,816	0/0:11,0:10:18.06:0,18,427	0/0:9,0:9:24.08:0,24,724
chr10	95817023	.	GA	G	1273.66	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.915;DP=625;FS=0.605;HRun=5;HaplotypeScore=71.6444;InbreedingCoeff=0.9482;MQ=93.22;MQ0=0;MQRankSum=-2.309;QD=28.95;ReadPosRankSum=2.099;VQSLOD=4.1471;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.16:0,96,1216	0/0:11,0:11:30.10:0,30,404	0/0:29,0:29:81.27:0,81,1092	0/0:24,0:24:63.01:0,63,760	0/0:21,0:21:63.21:0,63,861	0/0:20,0:20:57.19:0,57,780	0/0:17,0:17:48.15:0,48,642	0/0:33,0:33:93.29:0,93,1231	0/0:20,0:20:60.20:0,60,821	0/0:30,0:30:87.29:0,87,1182	0/0:15,0:15:45.15:0,45,613	0/0:18,0:18:51.17:0,51,696	0/0:28,0:28:84.28:0,84,1149	0/0:22,0:22:66.17:0,66,869	0/0:27,0:27:78.25:0,78,1051	0/0:27,0:27:81.24:0,81,1076	1/1:1,25:26:72.20:817,72,0	1/1:1,17:18:51.15:578,51,0	0/0:23,0:23:66.22:0,66,903	0/0:26,0:26:75.25:0,75,1026	0/0:34,0:34:96.32:0,96,1313	0/0:14,0:14:42.14:0,42,565	0/0:19,0:19:54.18:0,54,729	0/0:23,0:23:69.21:0,69,925	0/0:17,0:17:48.14:0,48,639	0/0:27,0:27:72.22:0,72,955	0/0:19,0:19:54.16:0,54,722	0/0:2,0:2:6.02:0,6,82
chr10	95817303	.	CT	C	432.12	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.403;DP=599;FS=0.639;HRun=10;HaplotypeScore=76.3182;InbreedingCoeff=0.8473;MQ=74.80;MQ0=0;MQRankSum=-0.042;QD=16.62;ReadPosRankSum=-0.309;VQSLOD=3.8716;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:26:62.01:527,62,0	0/0:10,0:10:27.06:0,27,291	0/0:18,0:19:19.59:0,20,254	0/0:10,0:10:14.96:0,15,133	0/0:26,0:26:72.17:0,72,781	0/0:24,0:24:57.14:0,57,622	0/0:21,0:22:60:0,60,645	0/0:30,3:33:6.19:0,6,752	0/0:21,0:21:54.15:0,54,597	0/0:26,0:26:63.15:0,63,677	0/0:17,1:18:25.03:0,25,483	0/0:16,1:17:25.07:0,25,484	0/0:31,1:32:61.16:0,61,894	0/0:19,0:19:48.13:0,48,531	0/0:27,2:29:24.31:0,24,684	0/0:25,0:25:62.01:0,62,724	0/0:18,0:18:42.11:0,42,464	0/0:18,0:18:44.83:0,45,464	0/0:17,0:17:41.96:0,42,434	0/0:25,0:25:60.16:0,60,663	0/0:19,0:19:51.12:0,51,555	0/0:21,0:21:57.10:0,57,603	0/0:25,1:26:32.34:0,32,567	0/0:16,0:16:39.02:0,39,404	0/0:13,1:14:9.87:0,10,320	0/0:25,0:26:66:0,66,705	0/0:28,2:29:32.13:0,32,811	0/0:11,0:11:33.03:0,33,343
chr10	95819703	.	A	AAAACAAAC	9865.56	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-9.223;DP=718;FS=5.695;HRun=0;HaplotypeScore=163.7315;InbreedingCoeff=0.9349;MQ=58.22;MQ0=8;MQRankSum=-8.520;QD=34.14;ReadPosRankSum=-3.545;VQSLOD=3.7076;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:40:51.17:0,51,946	1/1:2,2:8:5.99:144,6,0	0/0:20,0:12:6.45:0,6,48	0/0:30,0:21:5.81:0,6,34	1/1:18,13:36:26.98:621,27,0	0/0:26,0:26:51.10:0,51,948	0/0:21,0:21:39.11:0,39,799	0/0:32,0:31:11.98:0,12,118	1/1:11,8:24:9.50:368,10,0	0/0:17,0:17:23.82:0,24,488	0/0:25,0:25:39.03:0,39,741	0/0:22,0:22:42.08:0,42,898	0/0:20,0:20:48.15:0,48,1077	0/0:23,0:23:42.13:0,42,871	1/1:13,16:34:36.12:1468,36,0	1/1:11,8:23:18.06:734,18,0	0/0:33,0:33:71.98:0,72,1510	0/0:26,0:26:45.12:0,45,981	1/1:17,0:20:27.65:589,28,0	1/1:10,16:31:45:1487,45,0	1/1:17,0:19:17.95:313,18,0	0/0:33,0:33:57.16:0,57,1154	0/0:19,0:20:11.95:0,12,720	0/0:33,0:33:66.15:0,66,1428	1/1:5,19:30:42.14:1713,42,0	1/1:16,10:33:41.12:1446,41,0	1/1:11,12:28:25.33:982,25,0	0/0:7,0:7:17.98:0,18,291
chr10	95821464	.	TACG	T	11002.91	PASS	AB=0.545;AC=21;AF=0.375;AN=56;BaseQRankSum=15.291;DP=691;FS=4.377;HRun=0;HaplotypeScore=102.3546;InbreedingCoeff=0.9214;MQ=88.51;MQ0=0;MQRankSum=-3.606;QD=42.16;ReadPosRankSum=2.459;VQSLOD=6.2048;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,2323	1/1:0,11:11:33.11:563,33,0	0/0:20,0:20:54.15:0,54,1042	0/0:31,0:31:79.29:0,79,1878	1/1:1,30:31:81.06:1212,81,0	0/0:27,0:27:78.25:0,78,1727	0/0:32,0:32:87.30:0,87,1929	0/0:41,0:41:99:0,123,2549	1/1:0,11:11:33.11:563,33,0	0/0:32,0:32:93.32:0,93,2057	0/0:18,0:18:54.17:0,54,1194	0/0:33,0:33:99:0,99,2167	0/0:39,0:39:99:0,114,2591	0/0:20,0:20:60.21:0,60,1383	1/1:0,27:27:69.20:1147,69,0	1/1:2,25:27:63.21:1048,63,0	0/0:23,0:23:69.24:0,69,1590	0/0:17,0:17:48.16:0,48,1077	1/1:1,21:22:63.20:1011,63,0	1/1:0,20:20:56.98:800,57,0	1/1:1,27:28:66.23:1125,66,0	0/0:26,0:26:78.21:0,78,1619	0/0:12,0:12:36.11:0,36,782	0/0:19,0:19:57.20:0,57,1263	1/1:0,27:27:69.24:1163,69,0	0/1:4,20:24:99:954,0,138	1/1:0,33:33:84.29:1418,84,0	0/0:5,0:5:15.05:0,15,346
chr10	95821734	.	AAT	A	764.01	PASS	AB=0.884;AC=6;AF=0.107;AN=56;BaseQRankSum=6.787;DP=494;FS=8.535;HRun=0;HaplotypeScore=58.1196;InbreedingCoeff=0.2150;MQ=71.03;MQ0=0;MQRankSum=-0.893;QD=9.92;ReadPosRankSum=0.763;VQSLOD=1.8531;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:26:63.20:788,63,0	0/1:7,2:9:50.99:51,0,273	0/1:11,1:12:19.47:19,0,227	0/0:7,0:7:6.02:0,6,99	0/0:22,1:23:28.69:0,29,989	0/0:17,1:19:13.74:0,14,727	0/0:21,0:21:45.15:0,45,737	0/0:38,0:38:87.29:0,87,1409	0/0:19,1:20:13.64:0,14,749	0/0:16,0:16:36.12:0,36,595	0/0:13,0:13:30.10:0,30,495	0/0:20,0:20:39.13:0,39,644	0/0:18,0:18:48.16:0,48,793	0/0:17,0:17:39.13:0,39,644	0/0:18,0:18:45.15:0,45,737	0/0:15,0:15:42.14:0,42,689	0/0:25,0:25:69.24:0,69,1139	0/1:21,2:23:14.91:15,0,789	0/0:8,0:8:15.03:0,15,202	0/0:26,0:28:69.22:0,69,1073	0/0:10,0:10:27.09:0,27,436	0/1:6,1:7:19.48:19,0,230	0/0:11,0:11:27.09:0,27,446	0/0:11,0:11:27.06:0,27,414	0/0:24,0:24:32.67:0,33,1039	0/0:17,0:17:45.15:0,45,728	0/0:19,0:19:51.15:0,51,796	0/0:18,1:19:4.61:0,5,607
chr10	95824687	.	TAA	T	1948.69	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-4.207;DP=478;FS=4.435;HRun=7;HaplotypeScore=83.3937;InbreedingCoeff=0.8312;MQ=67.69;MQ0=30;MQRankSum=5.144;QD=10.53;ReadPosRankSum=2.255;VQSLOD=0.0088;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:22.92:0,23,170	0/0:6,0:6:11.98:0,12,115	0/0:39,0:16:26.80:0,27,246	0/0:41,0:20:28.01:0,28,307	0/0:19,0:16:32.94:0,33,296	0/1:11,0:11:21.20:65,0,21	1/1:13,0:11:9.19:77,9,0	1/1:23,0:23:47.52:394,48,0	0/0:13,0:13:27:0,27,246	1/1:16,0:16:33.09:256,33,0	1/1:15,0:12:17.23:145,17,0	1/1:14,0:14:28.40:220,28,0	1/1:10,0:10:0.54:112,1,0	1/1:9,0:8:10.53:78,11,0	0/0:25,0:24:36.01:0,36,358	0/0:18,0:18:35.95:0,36,340	1/1:10,2:9:23.57:222,24,0	1/1:8,6:10:23.97:225,24,0	0/0:14,0:14:32.99:0,33,318	0/0:24,0:22:22.98:0,23,184	0/0:7,0:7:11.97:0,12,100	1/1:13,0:13:22.20:173,22,0	1/1:10,0:7:5.97:47,6,0	1/1:14,0:14:11.73:107,12,0	0/0:23,0:21:59.12:0,59,486	0/0:19,0:18:41.97:0,42,415	0/0:31,0:29:41.62:0,42,419	1/1:11,0:9:4.46:44,4,0
chr10	95824693	.	A	AAGAGAGAG	9252.12	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=-3.582;DP=574;FS=0.000;HRun=0;HaplotypeScore=146.3665;InbreedingCoeff=0.5477;MQ=59.31;MQ0=36;MQRankSum=-2.296;QD=20.56;ReadPosRankSum=0.242;VQSLOD=4.1027;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:11:12.04:163,12,0	1/1:6,0:6:9.01:221,9,0	0/0:43,0:15:2.87:0,3,40	0/0:50,0:18:12.04:0,12,197	1/1:20,0:24:21.07:748,21,0	1/1:17,0:17:5.97:103,6,0	1/1:14,0:11:2.50:9,2,0	1/1:22,0:22:17.54:243,18,0	1/1:9,4:15:6.02:242,6,0	1/1:19,0:17:22.32:372,22,0	0/1:13,0:9:0:0,0,0	1/1:16,0:16:12.04:186,12,0	1/1:14,0:14:12.04:206,12,0	1/1:10,0:9:4.83:19,5,0	1/1:13,16:32:33.11:1232,33,0	1/1:15,0:24:14.78:447,15,0	0/0:15,0:12:21.02:0,21,309	0/1:15,0:11:14.02:14,0,271	1/1:13,7:20:36.06:975,36,0	1/1:16,10:27:14.77:401,15,0	1/1:10,0:10:3.44:23,3,0	1/1:17,0:16:2.60:10,3,0	1/1:13,0:10:0.19:0,0,0	0/0:16,0:16:2.93:0,3,30	1/1:30,0:28:36.11:949,36,0	1/1:13,8:22:36.12:1069,36,0	1/1:17,18:35:36.02:1326,36,0	1/1:12,0:10:20.66:294,21,0
chr10	95826562	.	TTTTG	T	8780.32	PASS	AC=50;AF=0.962;AN=52;BaseQRankSum=-2.048;DP=570;FS=7.663;HRun=0;HaplotypeScore=110.3269;InbreedingCoeff=0.5034;MQ=65.97;MQ0=2;MQRankSum=-0.710;QD=17.53;ReadPosRankSum=3.011;VQSLOD=4.2130;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:24:10.92:95,11,0	1/1:3,6:9:18.06:283,18,0	./.	./.	1/1:8,23:31:66.02:902,66,0	1/1:10,0:23:30.02:272,30,0	1/1:7,0:17:9.01:84,9,0	0/0:26,0:30:5.70:0,6,17	1/1:4,10:14:21.07:330,21,0	1/1:12,0:24:25.96:224,26,0	1/1:9,0:20:17.97:167,18,0	1/1:5,0:15:24.03:223,24,0	1/1:4,0:16:24.02:222,24,0	1/1:9,12:21:30.10:472,30,0	1/1:5,17:22:45.15:703,45,0	1/1:9,17:25:30.10:472,30,0	1/1:8,0:15:11.61:94,12,0	1/1:10,0:23:14.69:123,15,0	1/1:17,7:24:21.07:330,21,0	1/1:9,16:25:45.08:655,45,0	1/1:7,15:22:39.13:613,39,0	1/1:5,0:17:20.70:179,21,0	1/1:4,0:14:1.82:9,2,0	1/1:8,0:17:5.87:53,6,0	1/1:6,16:23:45.15:688,45,0	1/1:9,19:29:60.18:898,60,0	1/1:10,17:27:42.14:660,42,0	1/1:0,0:3:3:28,3,0
chr10	95827041	.	CT	C	25918.29	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.508;DP=771;FS=7.538;HRun=2;HaplotypeScore=96.5860;InbreedingCoeff=0.9976;MQ=80.18;MQ0=0;MQRankSum=-10.653;QD=35.90;ReadPosRankSum=6.576;VQSLOD=4.4477;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,59:59:99:2255,175,0	1/1:0,10:10:30.10:389,30,0	0/0:31,0:31:90.29:0,90,1281	0/0:18,0:18:54.14:0,54,726	1/1:3,22:25:69.22:891,69,0	1/1:0,22:22:60.19:776,60,0	1/1:0,35:35:96.31:1247,96,0	1/1:0,37:37:99:1381,108,0	1/1:1,21:22:57.19:740,57,0	1/1:0,30:30:90.29:1167,90,0	1/1:0,13:13:39.13:506,39,0	1/1:0,32:32:84.15:1091,84,0	1/1:2,31:33:90.29:1168,90,0	1/1:0,39:39:99:1285,99,0	1/1:0,30:30:84.27:1091,84,0	1/1:0,31:31:81.16:1051,81,0	1/1:0,26:26:75.24:972,75,0	1/1:0,16:16:48.16:623,48,0	1/1:1,24:23:69.22:885,69,0	1/1:1,24:25:66.08:827,66,0	1/1:1,43:44:99:1519,117,0	1/1:0,28:28:78.25:1012,78,0	1/1:0,22:22:63.20:818,63,0	1/1:1,26:27:75.24:970,75,0	1/1:1,18:19:48.16:623,48,0	1/1:0,35:35:99:1346,105,0	1/1:2,27:29:78.25:1011,78,0	1/1:0,8:8:21.07:273,21,0
chr10	95827757	.	TTTGGTTGG	T	11409.84	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-7.505;DP=657;FS=2.414;HRun=0;HaplotypeScore=203.5557;InbreedingCoeff=0.9201;MQ=65.19;MQ0=2;MQRankSum=-12.807;QD=32.88;ReadPosRankSum=0.419;VQSLOD=4.4406;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:40:33.11:614,33,0	1/1:1,4:5:12.04:303,12,0	0/0:24,0:19:6.02:0,6,248	0/0:28,0:24:21.54:0,22,687	1/1:10,27:37:63.17:1463,63,0	0/0:6,0:19:35.96:0,36,295	0/0:13,0:32:41.98:0,42,407	0/0:24,0:24:18.06:0,18,403	1/1:6,16:22:42.14:1062,42,0	0/0:9,0:27:59.94:0,60,516	0/0:2,0:6:11.99:0,12,98	0/0:14,0:29:38.96:0,39,364	0/0:12,0:26:41.63:0,42,368	0/0:9,0:22:38.97:0,39,409	1/1:9,18:27:51.14:1234,51,0	1/1:7,16:23:36.12:910,36,0	1/1:13,0:24:18.06:333,18,0	1/1:8,0:13:18.06:335,18,0	1/1:9,15:23:45.12:1019,45,0	1/1:8,14:22:42.10:1006,42,0	1/1:26,2:27:2.92:20,3,0	0/0:7,0:17:29.98:0,30,269	0/0:6,0:18:31.24:0,31,309	0/0:7,0:28:56.94:0,57,467	1/1:9,10:19:27.05:626,27,0	1/1:14,18:32:1.80:1272,2,0	1/1:13,18:31:48.16:1213,48,0	0/0:3,0:10:20.97:0,21,172
chr10	95829237	.	A	AT	13855.47	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=-0.916;DP=529;FS=16.148;HRun=0;HaplotypeScore=121.5818;InbreedingCoeff=0.7419;MQ=71.97;MQ0=0;MQRankSum=-1.182;QD=28.39;ReadPosRankSum=5.907;VQSLOD=3.5958;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:35:91.24:1093,91,0	1/1:0,8:8:21.02:234,21,0	0/1:13,0:10:0.22:0,0,69	0/1:6,0:6:14.04:14,0,38	1/1:0,21:21:60.09:691,60,0	1/1:2,19:21:48.92:581,49,0	1/1:1,13:14:33.57:393,34,0	1/1:1,28:29:83.71:991,84,0	1/1:1,17:18:54.16:637,54,0	1/1:3,13:16:30.80:451,31,0	1/1:0,18:18:48.08:566,48,0	1/1:1,14:15:39.05:444,39,0	1/1:2,14:16:30.38:389,30,0	1/1:2,13:15:32.57:390,33,0	1/1:0,18:18:42.13:502,42,0	1/1:1,17:18:49.83:604,50,0	0/0:27,0:27:60.71:0,61,383	0/0:14,0:14:33.45:0,33,167	1/1:3,17:20:52.19:645,52,0	1/1:3,20:23:52.10:645,52,0	1/1:4,14:18:32.84:417,33,0	1/1:4,21:25:61.65:713,62,0	1/1:1,22:23:55.54:681,56,0	1/1:0,13:13:33.10:391,33,0	1/1:6,24:30:59.74:708,60,0	1/1:2,21:23:61.35:756,61,0	1/1:2,21:23:53.08:626,53,0	1/1:0,8:8:24.07:293,24,0
chr10	95829238	.	A	AT	15883.65	PASS	AB=1.000;AC=54;AF=0.964;AN=56;BaseQRankSum=-3.683;DP=541;FS=12.060;HRun=6;HaplotypeScore=119.0377;InbreedingCoeff=0.0675;MQ=70.40;MQ0=0;MQRankSum=-3.832;QD=29.36;ReadPosRankSum=3.387;VQSLOD=3.4934;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:93.29:1149,93,0	1/1:8,0:8:18.06:222,18,0	0/1:13,0:10:23.20:23,0,36	0/1:4,0:5:9.31:9,0,47	1/1:22,0:22:60.15:724,60,0	1/1:21,0:21:54.11:638,54,0	1/1:15,0:15:33.10:408,33,0	1/1:32,0:32:90.19:1054,90,0	1/1:18,0:18:54.17:662,54,0	1/1:19,0:19:45.07:511,45,0	1/1:19,0:19:51.05:592,51,0	1/1:15,0:15:39.56:466,40,0	1/1:17,0:17:36.08:423,36,0	1/1:15,0:15:36.10:433,36,0	1/1:19,0:19:48.08:559,48,0	1/1:20,0:20:57.11:671,57,0	1/1:3,24:27:60.17:735,60,0	1/1:0,13:13:33.11:413,33,0	1/1:20,0:20:54.17:661,54,0	1/1:23,0:23:54.17:666,54,0	1/1:17,0:17:36.11:445,36,0	1/1:25,0:25:66.60:778,67,0	1/1:25,0:25:60.62:723,61,0	1/1:13,0:13:33.10:408,33,0	1/1:30,0:30:65.48:774,65,0	1/1:25,0:25:69.09:793,69,0	1/1:20,0:21:54.57:648,55,0	1/1:8,0:8:24.08:295,24,0
chr10	95829910	.	T	TA	11511.28	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=1.467;DP=726;FS=6.202;HRun=3;HaplotypeScore=105.9335;InbreedingCoeff=0.9991;MQ=70.11;MQ0=0;MQRankSum=-5.277;QD=36.90;ReadPosRankSum=-4.039;VQSLOD=2.7697;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.27:0,87,1044	0/0:11,0:11:33.10:0,33,395	0/0:22,0:21:57.15:0,57,667	0/0:16,0:16:41.49:0,41,469	0/0:29,0:29:84.26:0,84,1008	1/1:2,24:26:72.24:1007,72,0	1/1:1,21:22:54.18:756,54,0	1/1:6,31:37:99:1318,99,0	0/0:31,0:31:90.28:0,90,1080	1/1:8,33:41:99:1592,117,0	1/1:4,24:28:72.24:1006,72,0	1/1:3,23:26:75.23:1017,75,0	1/1:0,28:28:84.28:1174,84,0	1/1:2,24:26:72.21:985,72,0	0/0:27,0:27:81.23:0,81,959	0/0:32,0:32:93.29:0,93,1116	0/0:21,0:21:60.13:0,60,683	0/0:32,0:32:84.24:0,84,993	0/0:23,0:23:63.19:0,63,756	0/0:25,0:25:72.20:0,72,852	0/0:32,0:32:87.27:0,87,1043	1/1:0,24:24:66.22:923,66,0	1/1:3,30:34:84.19:1125,84,0	1/1:0,13:12:24.03:315,24,0	0/0:31,0:30:93.29:0,93,1116	0/0:26,1:27:33.29:0,33,802	0/0:25,0:25:66.20:0,66,790	1/1:0,7:7:21.07:294,21,0
chr10	95829935	.	T	TAC	10198.75	PASS	AB=0.942;AC=26;AF=0.464;AN=56;BaseQRankSum=7.089;DP=704;FS=0.000;HRun=0;HaplotypeScore=122.3004;InbreedingCoeff=0.8215;MQ=62.37;MQ0=0;MQRankSum=-10.253;QD=30.26;ReadPosRankSum=-4.028;VQSLOD=5.0208;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:57.18:0,57,713	0/0:9,0:9:21.05:0,21,248	0/0:29,0:22:25.85:0,26,335	0/1:15,0:13:17.40:17,0,130	0/0:31,0:32:81.08:0,81,977	1/1:8,16:24:27.42:741,27,0	1/1:8,9:17:0.32:429,0,0	1/1:16,18:34:66.21:1029,66,0	0/0:26,0:26:69.22:0,69,863	1/1:10,31:42:99:1579,99,0	1/1:4,22:26:60.19:950,60,0	1/1:6,19:25:51.15:813,51,0	1/1:6,16:21:51.15:813,51,0	1/1:5,17:22:60.20:973,60,0	0/0:34,0:34:90.27:0,90,1113	0/0:28,0:28:72.23:0,72,901	0/0:24,0:24:57.18:0,57,713	0/0:24,0:24:57.18:0,57,713	0/0:29,0:29:51.16:0,51,637	0/0:26,0:26:69.20:0,69,838	0/0:23,0:23:47.88:0,48,588	1/1:6,18:24:54.18:882,54,0	1/1:8,23:31:81.28:1316,81,0	1/1:4,7:11:14.56:246,15,0	0/0:28,0:29:77.91:0,78,928	0/1:31,2:33:14.33:14,0,886	0/0:27,0:27:72.21:0,72,887	1/1:3,7:10:24.08:395,24,0
chr10	95829948	.	A	AC	1649.34	PASS	AB=0.978;AC=14;AF=0.250;AN=56;BaseQRankSum=19.759;DP=707;FS=2.511;HRun=1;HaplotypeScore=129.9292;InbreedingCoeff=-0.0991;MQ=60.04;MQ0=0;MQRankSum=-11.983;QD=5.41;ReadPosRankSum=1.993;VQSLOD=0.7183;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:69.19:0,69,932	0/0:10,0:10:26.95:0,27,345	0/0:28,0:22:5.09:0,5,440	0/1:12,1:9:18.17:18,0,133	0/0:31,0:31:87.21:0,87,1169	0/1:24,0:24:89.18:89,0,185	0/1:17,0:17:97.67:98,0,154	0/1:33,0:33:99:116,0,345	0/0:30,0:30:90.27:0,90,1200	0/1:36,1:37:13.42:257,0,13	0/1:28,0:28:99:136,0,142	0/1:25,0:25:67.79:145,0,68	0/1:22,0:21:68.41:128,0,68	0/1:25,1:27:99:189,0,170	0/0:36,0:36:99:0,105,1437	0/0:29,0:29:87.29:0,87,1203	0/0:25,0:25:75.24:0,75,1015	0/0:23,0:23:69.23:0,69,952	0/0:23,0:23:69.22:0,69,937	0/0:27,0:27:78.69:0,79,1028	0/0:24,0:24:69.22:0,69,929	1/1:21,0:21:28.39:255,28,0	0/1:34,1:35:99:318,0,152	0/1:10,0:10:3.24:40,0,3	0/0:26,0:25:78.05:0,78,1039	0/0:38,0:38:90.89:0,91,1320	0/0:24,0:24:72.22:0,72,987	0/1:12,1:13:22.55:23,0,148
chr10	95830885	.	ATTTC	A	3131.87	PASS	AB=0.988;AC=36;AF=0.643;AN=56;BaseQRankSum=-5.950;DP=469;FS=0.520;HRun=0;HaplotypeScore=96.7619;InbreedingCoeff=-0.0789;MQ=62.29;MQ0=8;MQRankSum=3.723;QD=7.40;ReadPosRankSum=3.270;VQSLOD=2.2699;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,1:20:4.68:158,5,0	1/1:8,0:8:5.53:119,6,0	0/0:20,0:8:14.93:0,15,144	0/0:18,0:10:8.09:0,8,128	1/1:21,0:20:26.33:172,26,0	0/0:8,0:8:8.83:0,9,58	0/1:12,0:13:5.26:5,0,120	0/1:27,0:27:99:102,0,197	1/1:10,0:10:13.88:116,14,0	0/1:24,0:24:74.38:161,0,74	0/1:23,0:22:72.86:73,0,96	0/1:17,0:17:35.14:35,0,137	1/1:8,0:8:2.06:73,2,0	0/1:12,0:12:45.21:87,0,45	1/1:13,1:14:23.71:180,24,0	0/1:16,0:16:11.78:71,0,12	1/1:21,1:22:25.06:292,25,0	1/1:20,0:18:40.24:307,40,0	1/1:19,1:19:35.60:336,36,0	1/1:15,1:16:1.75:135,2,0	0/1:7,0:7:0:0,0,0	0/1:13,0:13:76.02:136,0,76	0/1:18,0:18:22.54:23,0,135	0/1:17,0:17:47.68:48,0,129	1/1:17,1:18:26.51:262,27,0	0/1:17,1:18:0.35:112,0,0	0/1:24,1:23:10.26:215,0,10	0/1:14,0:11:65.51:78,0,66
chr10	95830890	.	TTTC	T	5220.07	PASS	AB=0.939;AC=39;AF=0.696;AN=56;BaseQRankSum=-6.454;DP=501;FS=9.320;HRun=0;HaplotypeScore=90.9302;InbreedingCoeff=0.0877;MQ=56.94;MQ0=11;MQRankSum=3.282;QD=11.50;ReadPosRankSum=1.921;VQSLOD=3.8258;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,2:25:22.42:247,22,0	1/1:6,4:10:20.85:236,21,0	0/0:20,0:8:15.25:0,15,136	0/0:16,0:8:8.50:0,9,104	1/1:24,0:22:38.68:271,39,0	0/0:11,0:11:9.65:0,10,50	0/1:16,0:16:28.30:28,0,99	0/1:29,0:28:99:149,0,109	1/1:8,1:9:21.82:181,22,0	0/1:25,0:25:10.22:246,0,10	0/1:23,0:22:33.29:126,0,33	0/1:13,0:13:69.43:83,0,69	1/1:9,0:9:4.45:93,4,0	0/1:14,2:16:2.39:181,0,2	1/1:16,0:15:34.40:269,34,0	1/1:16,2:18:31.27:237,31,0	1/1:19,4:23:18.35:444,18,0	1/1:16,4:18:39.82:470,40,0	1/1:17,2:18:38.60:392,39,0	1/1:18,1:19:28.87:237,29,0	0/1:0,6:6:0:0,0,0	0/1:14,0:14:31.09:159,0,31	0/1:15,0:15:45.74:48,0,46	0/1:20,0:20:51.72:52,0,60	1/1:18,3:21:43.33:454,43,0	1/1:17,2:19:3.57:196,4,0	1/1:24,2:24:13.54:341,14,0	0/1:16,1:14:49.36:82,0,49
chr10	95830891	.	TTC	T	6627.89	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=-6.325;DP=493;FS=1.239;HRun=0;HaplotypeScore=77.8347;InbreedingCoeff=0.4207;MQ=56.89;MQ0=11;MQRankSum=2.278;QD=14.50;ReadPosRankSum=0.197;VQSLOD=4.6472;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,6:24:34.60:331,35,0	1/1:9,1:10:23.47:221,23,0	0/0:20,0:8:14.70:0,15,129	0/0:16,0:8:7.85:0,8,81	1/1:4,20:22:39.07:320,39,0	1/1:11,0:11:6.15:21,6,0	0/1:16,0:16:13.27:70,0,13	0/1:29,0:28:16.13:220,0,16	1/1:8,0:8:23.21:214,23,0	1/1:24,0:24:40.54:327,41,0	1/1:20,1:20:13.71:221,14,0	1/1:13,0:13:6.12:131,6,0	1/1:9,0:9:5.58:134,6,0	1/1:14,1:15:23.39:255,23,0	1/1:12,4:15:36.46:414,36,0	1/1:15,3:18:38.76:391,39,0	1/1:19,4:23:17.14:419,17,0	1/1:19,1:18:43.37:431,43,0	1/1:17,2:18:31.82:418,32,0	1/1:16,2:18:35.38:293,35,0	0/1:6,0:6:0:0,0,0	1/1:14,0:14:20.74:212,21,0	1/1:15,0:15:14.28:144,14,0	0/1:20,0:20:0.93:83,0,1	1/1:13,8:21:51.82:551,52,0	1/1:18,1:19:13.87:252,14,0	1/1:22,3:23:34.97:437,35,0	1/1:17,0:14:1.57:118,2,0
chr10	95830892	.	TC	T	7481.06	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-1.287;DP=494;FS=2.379;HRun=1;HaplotypeScore=67.7475;InbreedingCoeff=0.8560;MQ=55.26;MQ0=20;MQRankSum=0.109;QD=16.30;ReadPosRankSum=1.715;VQSLOD=5.1569;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:24:46.68:336,47,0	1/1:10,0:10:21.85:197,22,0	0/0:19,0:7:14.74:0,15,124	0/0:16,0:8:6.67:0,7,71	1/1:22,2:22:39.39:272,39,0	1/1:10,0:10:21.15:130,21,0	1/1:14,2:16:33.18:200,33,0	1/1:28,1:28:50.71:384,51,0	1/1:8,0:8:22.53:197,23,0	1/1:24,0:24:61.25:456,61,0	1/1:18,1:18:43.09:346,43,0	1/1:13,0:13:36.85:264,37,0	1/1:8,1:9:14.99:137,15,0	1/1:15,0:15:35.82:300,36,0	1/1:13,3:15:38.51:351,39,0	1/1:15,3:17:40.62:356,41,0	1/1:25,0:23:14.94:354,15,0	1/1:19,2:18:46.89:390,47,0	1/1:19,0:18:36.32:411,36,0	1/1:5,14:18:34.47:308,34,0	0/1:6,0:6:0:0,0,0	1/1:13,0:13:37.20:269,37,0	1/1:13,1:14:33.99:261,34,0	1/1:21,0:20:26.94:174,27,0	1/1:21,0:21:51.75:444,52,0	1/1:17,2:19:22.99:261,23,0	1/1:21,3:22:37.71:474,38,0	1/1:18,0:14:33.14:211,33,0
chr10	95833306	.	GA	G	13144.50	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.507;DP=586;FS=0.990;HRun=8;HaplotypeScore=120.2235;InbreedingCoeff=0.9849;MQ=71.17;MQ0=1;MQRankSum=-5.102;QD=24.48;ReadPosRankSum=4.108;VQSLOD=3.9449;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:29:78.12:744,78,0	1/1:0,9:9:27.04:257,27,0	0/0:31,0:20:20.42:0,20,210	0/0:17,0:10:14.14:0,14,98	1/1:9,21:30:63.08:599,63,0	1/1:1,25:26:72.11:687,72,0	1/1:1,9:10:27.04:257,27,0	1/1:9,24:33:78.09:740,78,0	1/1:3,17:20:36.05:342,36,0	1/1:5,22:27:75.06:708,75,0	1/1:3,18:21:54.08:514,54,0	1/1:2,14:16:39.06:373,39,0	1/1:3,16:19:51.08:487,51,0	1/1:3,18:21:57.08:542,57,0	1/1:1,15:16:39.06:373,39,0	1/1:2,14:16:45.07:428,45,0	1/1:1,15:16:42.05:397,42,0	1/1:5,15:20:42.02:390,42,0	1/1:3,20:23:57.07:541,57,0	1/1:5,26:31:84.12:799,84,0	1/1:0,10:10:24.04:229,24,0	1/1:1,15:16:45.07:428,45,0	1/1:3,22:25:69.10:656,69,0	1/1:0,10:10:30.04:284,30,0	1/1:2,29:31:90.13:856,90,0	1/1:1,17:18:51.06:483,51,0	1/1:5,22:27:60.07:570,60,0	1/1:0,17:17:48.07:459,48,0
chr10	95833316	.	GTT	G	14319.07	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.692;DP=592;FS=1.000;HRun=10;HaplotypeScore=134.3487;InbreedingCoeff=0.9933;MQ=72.34;MQ0=1;MQRankSum=-4.531;QD=26.62;ReadPosRankSum=4.925;VQSLOD=3.8592;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,27:33:72.16:793,72,0	1/1:1,9:10:27.06:297,27,0	0/0:34,0:21:23.98:0,24,258	0/0:19,1:13:21:0,21,188	1/1:5,19:24:66.17:726,66,0	1/1:3,26:29:72.18:785,72,0	1/1:0,10:10:30.08:330,30,0	1/1:11,17:28:60.08:643,60,0	1/1:6,11:17:39.08:419,39,0	1/1:8,21:29:66.12:712,66,0	1/1:4,16:20:51.11:553,51,0	1/1:5,11:16:39.07:422,39,0	1/1:2,16:18:48.12:529,48,0	1/1:3,19:22:51.12:560,51,0	1/1:4,11:15:36.06:385,36,0	1/1:1,16:17:45.11:495,45,0	1/1:3,16:19:39.10:425,39,0	1/1:2,15:17:45.10:493,45,0	1/1:6,21:27:59.89:654,60,0	1/1:6,25:31:75.16:814,75,0	1/1:3,7:10:21.03:221,21,0	1/1:5,12:17:42.09:452,42,0	1/1:2,22:24:66.16:726,66,0	1/1:0,12:12:33.08:362,33,0	1/1:2,32:34:90.23:990,90,0	1/1:4,14:18:45.09:485,45,0	1/1:5,19:24:66.16:717,66,0	1/1:7,10:17:30.05:330,30,0
chr10	95834459	.	C	CATAGA	30761.90	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=8.581;DP=699;FS=0.000;HRun=0;HaplotypeScore=221.0004;InbreedingCoeff=0.9014;MQ=78.60;MQ0=0;MQRankSum=-11.504;QD=47.69;ReadPosRankSum=7.155;VQSLOD=4.6841;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,13:27:53.50:1140,54,0	1/1:5,5:10:21.60:372,22,0	0/0:30,0:30:81.11:0,81,1584	0/0:24,0:24:69.20:0,69,1544	1/1:10,27:38:63.18:1368,63,0	1/1:16,17:33:50.09:1301,50,0	1/1:10,4:14:18.51:342,19,0	1/1:22,17:39:61.44:1669,61,0	1/1:5,28:33:70.50:2013,71,0	1/1:7,25:32:64.48:1946,64,0	1/1:5,15:20:20.99:985,21,0	1/1:6,18:24:63.18:1371,63,0	1/1:6,18:24:51.16:1179,51,0	1/1:2,15:17:40.69:937,41,0	1/1:16,22:38:48.81:1976,49,0	1/1:7,23:30:57.08:1704,57,0	1/1:10,8:18:42.08:853,42,0	1/1:7,6:13:4.34:593,4,0	1/1:17,9:26:11.36:1085,11,0	1/1:2,9:15:30.10:723,30,0	1/1:11,9:20:31.56:534,32,0	1/1:8,12:20:42.09:822,42,0	1/1:11,15:26:30.78:1070,31,0	1/1:9,14:23:30.06:621,30,0	1/1:9,14:23:63.12:1222,63,0	1/1:12,19:35:59.18:2050,59,0	1/1:8,30:42:99:2520,108,0	1/1:1,4:5:15.05:365,15,0
chr10	95834460	.	C	CA	7244.25	PASS	AB=0.693;AC=45;AF=0.804;AN=56;BaseQRankSum=15.442;DP=699;FS=5.153;HRun=0;HaplotypeScore=249.4199;InbreedingCoeff=0.1512;MQ=79.66;MQ0=0;MQRankSum=-13.817;QD=11.27;ReadPosRankSum=10.167;VQSLOD=4.2572;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:15,13:28:13.09:228,13,0	0/1:5,5:10:23.94:64,0,24	0/0:29,0:29:87.19:0,87,1098	0/0:27,0:27:69.20:0,69,956	1/1:9,27:37:62.16:416,62,0	1/1:16,17:33:19.25:308,19,0	0/1:10,4:14:21.49:63,0,21	0/1:23,17:40:84.21:367,0,84	1/1:4,28:32:58.70:524,59,0	1/1:8,25:33:30.86:499,31,0	1/1:5,15:20:32.28:269,32,0	1/1:6,18:24:21.58:313,22,0	1/1:6,18:24:39.26:300,39,0	1/1:2,15:17:30.56:243,31,0	1/1:17,22:39:38.21:418,38,0	1/1:7,23:30:50.51:451,51,0	0/1:10,8:18:15.54:127,0,16	1/1:7,6:13:2.27:123,2,0	0/1:15,9:24:92.52:203,0,93	1/1:6,9:15:35.82:223,36,0	0/1:9,9:18:13.80:81,0,14	1/1:7,12:19:0.41:174,0,0	1/1:11,15:26:40.38:304,40,0	1/1:10,14:24:6.54:140,7,0	0/1:9,14:23:12.47:240,0,12	1/1:16,20:36:21.56:420,22,0	1/1:10,31:41:54.81:639,55,0	1/1:1,4:5:14.88:106,15,0
chr10	95834466	.	A	AT	2067.93	PASS	AB=0.984;AC=27;AF=0.482;AN=56;BaseQRankSum=15.421;DP=647;FS=9.504;HRun=0;HaplotypeScore=254.0687;InbreedingCoeff=-0.7144;MQ=83.53;MQ0=0;MQRankSum=-12.761;QD=3.51;ReadPosRankSum=10.355;VQSLOD=1.3350;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:56.18:56,0,60	0/1:8,0:8:34.57:35,0,104	0/0:28,0:28:81.23:0,81,1085	0/0:30,0:30:84.26:0,84,1173	0/1:37,1:38:72.45:216,0,72	0/1:27,0:27:76.56:96,0,77	1/1:7,0:7:8.78:28,9,0	0/1:35,0:35:70.96:71,0,539	0/1:33,0:33:97.17:122,0,97	0/1:32,0:32:99:117,0,176	0/1:20,0:20:45.97:66,0,46	0/1:22,0:22:42.65:77,0,43	0/1:20,0:20:2.71:79,0,3	0/1:19,0:19:18.18:91,0,18	0/1:34,4:38:99:163,0,150	0/1:26,2:28:11.88:131,0,12	0/1:16,0:16:66.99:67,0,97	0/1:12,0:12:8.97:9,0,222	0/1:20,0:20:17.02:17,0,366	0/1:17,0:17:54.37:54,0,65	0/1:15,0:15:14.48:50,0,14	0/1:19,0:19:28.13:57,0,28	0/1:17,0:23:40.93:110,0,41	0/1:19,0:19:30.55:89,0,31	0/1:17,0:17:1.67:110,0,2	0/1:33,0:33:99:107,0,349	0/1:39,0:39:54.11:176,0,54	0/1:6,0:6:8.82:26,0,9
chr10	95837124	.	T	TA	13379.55	PASS	AB=0.774;AC=52;AF=0.929;AN=56;BaseQRankSum=-7.192;DP=576;FS=5.996;HRun=10;HaplotypeScore=60.1454;InbreedingCoeff=0.5246;MQ=71.19;MQ0=0;MQRankSum=-0.951;QD=23.76;ReadPosRankSum=2.799;VQSLOD=5.7162;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:42.11:448,42,0	1/1:1,7:8:18.05:192,18,0	0/1:9,0:10:2.08:2,0,107	0/0:13,0:13:17.06:0,17,127	1/1:7,28:36:53.63:774,54,0	1/1:5,14:19:44.95:462,45,0	1/1:6,18:24:16.35:474,16,0	1/1:3,23:26:69.16:728,69,0	1/1:2,17:19:26.49:487,26,0	1/1:6,26:32:53.55:775,54,0	1/1:4,16:20:26.49:487,26,0	1/1:2,17:19:54.13:569,54,0	1/1:5,8:13:24.06:256,24,0	1/1:1,17:18:26.45:474,26,0	0/1:3,14:17:10.18:313,0,10	1/1:3,20:24:38.51:612,39,0	1/1:6,22:28:68.84:715,69,0	1/1:2,13:16:37.61:376,38,0	1/1:3,15:18:1.83:423,2,0	1/1:5,28:33:75.16:788,75,0	1/1:0,10:10:18.05:192,18,0	1/1:1,13:14:17.53:391,18,0	1/1:2,22:26:44.22:657,44,0	1/1:3,11:14:11.51:327,12,0	1/1:4,20:24:32.54:551,33,0	1/1:3,21:24:41.51:640,42,0	1/1:8,32:40:87.07:918,87,0	1/1:2,11:13:33.08:347,33,0
chr10	95837367	.	G	GTTT	14480.41	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-5.596;DP=632;FS=3.043;HRun=10;HaplotypeScore=76.7443;InbreedingCoeff=0.8588;MQ=71.03;MQ0=1;MQRankSum=-4.087;QD=26.19;ReadPosRankSum=4.415;VQSLOD=3.4713;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:24:27.04:465,27,0	1/1:2,3:7:15.03:238,15,0	0/0:18,0:16:30.25:0,30,310	0/1:21,0:21:4.84:5,0,267	1/1:4,18:27:63:938,63,0	1/1:3,20:24:36.08:639,36,0	1/1:6,11:17:23.74:461,24,0	0/0:41,0:42:43.39:0,43,907	1/1:4,10:14:11.25:180,11,0	1/1:7,25:34:72.16:1181,72,0	1/1:3,5:19:46.18:557,46,0	1/1:4,13:19:21.07:374,21,0	1/1:8,13:23:20.46:310,20,0	1/1:2,16:19:18.06:331,18,0	1/1:5,19:24:36.06:588,36,0	1/1:3,15:22:33.07:550,33,0	1/1:10,9:22:40.34:664,40,0	1/1:3,17:24:36.10:657,36,0	1/1:4,12:18:40.25:648,40,0	1/1:1,14:18:45:619,45,0	1/1:3,13:17:21.07:367,21,0	1/1:6,16:26:42.06:702,42,0	1/1:4,18:24:24.06:427,24,0	1/1:1,19:21:45.13:830,45,0	1/1:4,10:15:30.02:470,30,0	1/1:2,23:28:69.83:1184,70,0	1/1:9,28:40:66.12:1094,66,0	0/0:18,0:18:48.11:0,48,580
chr10	95838471	.	TAATAAATAAATAAATA	T	6838.32	PASS	AB=0.875;AC=39;AF=0.929;AN=42;BaseQRankSum=-0.064;DP=204;FS=0.000;HRun=0;HaplotypeScore=91.8786;InbreedingCoeff=0.0852;MQ=39.24;MQ0=10;MQRankSum=0.874;QD=42.47;ReadPosRankSum=1.598;VQSLOD=3.8921;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,1:6:7.05:127,0,7	1/1:2,1:3:3.01:133,3,0	./.	./.	1/1:0,1:1:3.01:133,3,0	1/1:4,12:15:24.08:977,24,0	1/1:2,2:4:3.01:133,3,0	0/0:23,0:15:3.01:0,3,177	1/1:4,3:7:9.03:399,9,0	1/1:5,0:5:3:27,3,0	./.	1/1:3,1:4:3.01:133,3,0	1/1:3,6:9:18.06:795,18,0	1/1:3,3:6:9.03:312,9,0	./.	1/1:2,3:5:9.03:399,9,0	1/1:16,8:23:18.06:798,18,0	1/1:7,1:8:6.02:243,6,0	1/1:12,7:17:21.06:821,21,0	1/1:3,1:4:3.01:133,3,0	1/1:5,1:6:3.01:64,3,0	./.	./.	./.	1/1:6,4:9:9.03:399,9,0	1/1:5,4:9:12.04:414,12,0	1/1:7,2:9:6.02:266,6,0	1/1:2,3:5:3.01:133,3,0
chr10	95839701	.	A	AG	27119.56	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.791;DP=643;FS=0.961;HRun=0;HaplotypeScore=189.2922;InbreedingCoeff=0.9217;MQ=61.70;MQ0=0;MQRankSum=-5.410;QD=43.60;ReadPosRankSum=4.332;VQSLOD=4.0728;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:51.17:814,51,0	1/1:0,11:11:33.11:523,33,0	0/0:13,0:14:20.39:0,20,309	0/0:7,0:7:5.49:0,5,82	1/1:1,33:34:93.46:1515,93,0	1/1:1,21:22:60.20:946,60,0	1/1:2,8:10:27.09:430,27,0	1/1:2,35:37:99:1700,108,0	1/1:2,20:22:63.21:1003,63,0	1/1:2,33:35:99:1667,105,0	1/1:3,33:36:96.80:1527,97,0	1/1:2,19:21:60.19:934,60,0	1/1:0,22:22:60.20:951,60,0	1/1:1,22:23:63.21:992,63,0	1/1:2,26:28:78.27:1233,78,0	1/1:0,27:27:75.26:1196,75,0	1/1:0,17:17:48.16:764,48,0	1/1:0,10:10:30.10:479,30,0	1/1:1,19:19:57.19:901,57,0	1/1:2,31:33:87.30:1373,87,0	1/1:0,7:7:18.06:287,18,0	1/1:3,22:25:66.23:1053,66,0	1/1:3,25:28:69.24:1093,69,0	1/1:0,7:7:15.03:240,15,0	1/1:2,31:33:90.31:1435,90,0	1/1:3,25:28:81.27:1271,81,0	1/1:3,36:38:99:1784,114,0	1/1:0,24:24:63.21:1008,63,0
chr10	95839745	.	T	TTAATGCATAA	73984.35	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.112;DP=679;FS=0.000;HRun=0;HaplotypeScore=225.1524;InbreedingCoeff=0.9924;MQ=61.13;MQ0=0;MQRankSum=-8.949;QD=113.65;ReadPosRankSum=1.458;VQSLOD=4.5560;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:16:42.10:2091,42,0	1/1:9,6:17:39.10:1712,39,0	0/0:20,0:20:60.20:0,60,1752	0/0:8,0:8:24.08:0,24,749	1/1:17,21:38:96.11:3754,96,0	1/1:13,16:30:87.08:3528,87,0	1/1:5,6:12:32.98:1209,33,0	1/1:27,10:37:99:3753,108,0	1/1:11,18:30:84.16:3527,84,0	1/1:16,20:38:99:4693,114,0	1/1:14,25:42:99:4706,108,0	1/1:6,8:15:42.07:1610,42,0	1/1:11,13:24:72.03:2773,72,0	1/1:11,8:19:57.06:2174,57,0	1/1:13,14:27:81.10:3101,81,0	1/1:4,17:21:60.17:2965,60,0	1/1:11,4:15:39.09:1488,39,0	1/1:7,5:12:36.08:1586,36,0	1/1:11,8:20:45.13:2002,45,0	1/1:9,25:35:99:4193,99,0	1/1:7,0:7:18:547,18,0	1/1:9,20:31:81.12:3599,81,0	1/1:10,17:29:77.99:3453,78,0	1/1:2,5:7:21.03:811,21,0	1/1:13,20:35:96.26:3995,96,0	1/1:9,18:29:81.28:4006,81,0	1/1:18,23:45:99:4873,114,0	1/1:9,9:19:45.11:1834,45,0
chr10	95839746	.	TCTTA	T	4418.84	PASS	AB=0.867;AC=25;AF=0.446;AN=56;BaseQRankSum=-5.798;DP=655;FS=1.055;HRun=0;HaplotypeScore=346.9699;InbreedingCoeff=-0.7983;MQ=61.61;MQ0=0;MQRankSum=-0.593;QD=7.16;ReadPosRankSum=-12.943;VQSLOD=-0.3706;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,1:15:40.87:41,0,371	0/1:14,2:16:99:101,0,296	0/0:20,0:20:59.42:0,59,1513	0/0:8,0:8:24.08:0,24,658	0/1:29,7:36:99:194,0,610	0/1:26,4:30:99:212,0,644	0/1:9,3:12:44.68:45,0,200	0/1:23,12:35:99:762,0,450	0/1:24,6:30:99:134,0,698	0/1:31,8:39:99:494,0,873	0/1:34,9:43:99:201,0,888	0/1:10,5:15:99:116,0,302	0/1:19,5:24:99:147,0,509	0/1:15,4:19:99:188,0,295	0/1:19,8:27:99:326,0,425	0/1:19,1:20:21.91:22,0,571	0/1:14,1:15:99:106,0,195	0/0:10,0:10:29.94:0,30,328	0/1:18,2:19:85.01:85,0,342	0/1:28,6:34:99:221,0,855	0/1:4,1:5:8.40:8,0,37	0/1:27,2:29:98.12:98,0,658	0/1:27,2:29:99:155,0,607	0/1:5,1:6:19.22:19,0,135	0/1:29,5:34:99:356,0,603	0/1:26,1:27:35.24:35,0,814	0/1:36,6:42:99:250,0,901	0/1:15,0:15:99:104,0,400
chr10	95840882	.	GA	G	7517.25	PASS	AB=0.830;AC=52;AF=0.929;AN=56;BaseQRankSum=-1.624;DP=576;FS=0.000;HRun=12;HaplotypeScore=168.0052;InbreedingCoeff=0.4091;MQ=66.79;MQ0=5;MQRankSum=-3.746;QD=14.08;ReadPosRankSum=4.828;VQSLOD=3.5432;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,22:33:71.47:521,71,0	1/1:2,3:5:13.86:87,14,0	0/1:63,2:33:17.28:17,0,211	0/0:40,2:20:11.23:0,11,75	1/1:4,12:16:32.33:234,32,0	1/1:0,9:9:26.90:209,27,0	1/1:8,18:27:33.56:393,34,0	0/1:17,14:31:14.20:273,0,14	1/1:5,10:15:20.11:219,20,0	1/1:5,15:21:55.81:420,56,0	1/1:3,9:12:32.86:251,33,0	1/1:6,16:22:59.19:439,59,0	1/1:3,18:21:56.28:425,56,0	1/1:2,15:18:49.84:373,50,0	1/1:6,15:21:53.26:396,53,0	1/1:5,17:23:52.83:400,53,0	1/1:6,15:20:49.13:370,49,0	1/1:12,8:19:27.25:210,27,0	1/1:4,11:14:32.86:255,33,0	1/1:3,9:12:32.23:234,32,0	1/1:5,9:14:19.35:129,19,0	1/1:3,6:9:25.54:167,26,0	1/1:6,14:21:49.76:354,50,0	1/1:8,19:25:35.43:271,35,0	1/1:8,9:17:34.02:229,34,0	1/1:6,8:14:34.60:244,35,0	1/1:6,13:19:47.12:351,47,0	1/1:0,2:2:5.98:46,6,0
chr10	95840901	.	GGGT	G	7914.98	PASS	AB=0.968;AC=43;AF=0.768;AN=56;BaseQRankSum=0.125;DP=601;FS=13.892;HRun=0;HaplotypeScore=203.5976;InbreedingCoeff=-0.0279;MQ=65.26;MQ0=6;MQRankSum=-6.162;QD=14.08;ReadPosRankSum=7.847;VQSLOD=3.0475;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,3:37:37.64:481,38,0	0/1:6,0:6:5.97:78,0,6	0/1:58,0:32:6.56:7,0,814	0/0:38,0:17:25.63:0,26,294	0/1:13,0:13:18.93:24,0,19	1/1:18,0:18:32.49:322,32,0	1/1:31,1:32:67.97:700,68,0	0/1:37,0:37:0.98:675,0,1	1/1:12,2:14:33.47:309,33,0	1/1:24,0:24:24.98:420,25,0	0/1:16,0:16:10.67:147,0,11	1/1:21,2:23:14.71:516,15,0	1/1:18,3:21:31.87:533,32,0	0/1:19,3:22:21.90:375,0,22	1/1:21,0:21:20.59:392,21,0	1/1:25,0:25:57.93:543,58,0	1/1:19,1:19:8.95:279,9,0	1/1:11,1:12:25.43:237,25,0	0/1:12,1:13:39.78:196,0,40	0/1:11,1:12:0.97:132,0,1	1/1:24,1:25:15.97:140,16,0	0/1:11,0:11:2.72:103,0,3	0/1:17,1:18:11.85:144,0,12	0/1:29,1:29:28.37:173,0,28	1/1:18,0:18:14.65:168,15,0	1/1:12,0:12:32.98:297,33,0	1/1:21,1:22:48.55:497,49,0	1/1:2,0:2:2.99:28,3,0
chr10	95840904	.	TGGG	T	14127.16	PASS	AB=0.965;AC=53;AF=0.946;AN=56;BaseQRankSum=-0.229;DP=595;FS=3.512;HRun=6;HaplotypeScore=177.2715;InbreedingCoeff=0.6068;MQ=64.41;MQ0=6;MQRankSum=-7.048;QD=25.45;ReadPosRankSum=5.222;VQSLOD=1.3352;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,29:36:68.69:891,69,0	1/1:0,6:6:11.98:161,12,0	0/1:53,0:32:5.98:6,0,857	0/0:39,0:20:33.03:0,33,501	1/1:3,11:14:3.01:48,3,0	1/1:1,15:16:39.01:561,39,0	1/1:4,28:32:78.05:1120,78,0	1/1:5,29:34:90.29:1414,90,0	1/1:3,12:15:38.68:529,39,0	1/1:3,18:21:60.12:881,60,0	1/1:3,12:15:18.05:264,18,0	1/1:5,19:24:54.13:828,54,0	1/1:5,16:21:51.12:778,51,0	1/1:6,17:23:42.03:600,42,0	1/1:3,18:21:48.05:706,48,0	1/1:1,25:26:66.03:939,66,0	1/1:5,15:19:33.05:485,33,0	1/1:3,9:12:27.04:377,27,0	1/1:8,5:13:24.05:349,24,0	1/1:2,11:13:18.01:255,18,0	1/1:3,24:27:33.24:349,33,0	1/1:2,9:11:20.94:248,21,0	1/1:5,12:17:15.05:237,15,0	1/1:4,26:29:29.17:369,29,0	1/1:2,15:17:21.02:305,21,0	1/1:1,11:12:36.10:542,36,0	1/1:3,18:21:51.14:778,51,0	1/1:1,2:3:8.98:108,9,0
chr10	95842282	.	ACGCG	A	4500.45	PASS	AB=0.982;AC=43;AF=0.768;AN=56;BaseQRankSum=-5.019;DP=446;FS=7.144;HRun=0;HaplotypeScore=144.3018;InbreedingCoeff=-0.0885;MQ=66.63;MQ0=6;MQRankSum=1.157;QD=11.11;ReadPosRankSum=3.876;VQSLOD=3.5548;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:32:9.06:322,0,9	1/1:6,0:7:15.04:201,15,0	1/1:8,0:8:2.68:11,3,0	0/1:10,0:9:21.94:22,0,33	1/1:3,12:17:3.01:51,3,0	1/1:18,0:18:2.61:191,3,0	1/1:27,0:27:31.01:425,31,0	1/1:17,0:17:15.05:210,15,0	1/1:5,18:24:30.09:468,30,0	0/1:28,0:28:21.04:344,0,21	0/1:12,0:13:11.23:129,0,11	0/1:15,0:14:0.70:93,0,1	0/1:12,0:12:7.34:67,0,7	0/1:14,0:14:18.41:102,0,18	1/1:7,8:16:9.03:153,9,0	1/1:6,2:9:12.04:189,12,0	0/1:13,0:13:5.19:51,0,5	1/1:18,0:17:20.15:307,20,0	1/1:1,0:4:5.05:44,5,0	1/1:6,8:17:9.02:130,9,0	0/0:12,0:22:0:0,0,0	0/0:17,0:17:2.81:0,3,20	1/1:12,0:13:7.27:97,7,0	0/1:21,0:21:7.71:87,0,8	1/1:3,6:11:3.01:51,3,0	1/1:14,5:20:30.55:418,31,0	1/1:7,4:13:18.06:263,18,0	1/1:3,0:2:6.02:75,6,0
chr10	95842296	.	G	GCACACA	1792.21	PASS	AB=0.931;AC=23;AF=0.411;AN=56;BaseQRankSum=-3.276;DP=434;FS=3.170;HRun=0;HaplotypeScore=171.6814;InbreedingCoeff=0.2534;MQ=49.04;MQ0=14;MQRankSum=-0.878;QD=7.83;ReadPosRankSum=-3.679;VQSLOD=1.6874;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,1:34:3.58:189,4,0	0/1:8,0:8:6.27:6,0,153	1/1:2,0:1:0.47:1,0,0	0/1:5,0:5:6.49:6,0,33	0/0:19,0:19:5.97:0,6,98	1/1:9,6:18:0.68:147,1,0	1/1:21,0:20:0.60:58,1,0	0/1:12,0:11:83.50:96,0,83	0/0:24,0:23:33.58:0,34,463	1/1:19,0:20:10.79:446,11,0	0/1:14,0:15:1.96:28,0,2	0/1:15,2:17:21.15:193,0,21	0/1:8,4:13:3.55:90,0,4	1/1:14,3:15:3.17:149,3,0	0/0:11,0:11:11.99:0,12,146	0/0:10,0:10:15.12:0,15,200	1/1:15,0:15:7.90:164,8,0	0/1:21,0:18:30.84:213,0,31	0/0:6,0:6:9.84:0,10,99	0/0:23,0:23:26.49:0,26,420	0/0:22,0:20:9.50:0,10,181	0/0:4,5:14:5.59:0,6,39	0/0:13,0:11:1.77:0,2,5	0/0:6,9:17:0.73:0,1,1	0/0:11,0:11:12.04:0,12,206	0/0:17,0:16:1.01:0,1,490	0/0:18,0:18:29.07:0,29,376	1/1:7,0:4:4.55:161,5,0
chr10	95842298	.	G	GCACACA	1651.77	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=-2.712;DP=428;FS=7.265;HRun=0;HaplotypeScore=169.7501;InbreedingCoeff=0.2872;MQ=48.43;MQ0=14;MQRankSum=-1.426;QD=7.34;ReadPosRankSum=-2.807;VQSLOD=1.6409;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:27:6.82:162,0,7	0/0:7,0:7:13.52:0,14,149	0/1:2,0:1:0:0,0,0	0/0:4,0:4:2.24:0,2,27	0/0:20,0:20:8.69:0,9,108	1/1:18,0:18:1.77:145,2,0	0/1:21,0:20:3.70:34,0,4	0/1:12,0:11:49.52:65,0,50	0/0:24,0:23:33.58:0,34,486	1/1:20,0:18:7.77:383,8,0	1/1:15,0:15:2.05:49,2,0	0/1:18,0:17:8.12:191,0,8	0/1:10,0:10:3.07:89,0,3	1/1:16,1:15:3.47:146,3,0	0/0:11,0:11:12.04:0,12,177	0/0:10,0:10:17.14:0,17,214	1/1:17,0:17:6.57:173,7,0	0/1:20,0:17:12.55:218,0,13	0/0:6,0:6:10.65:0,11,102	0/0:23,0:23:26.50:0,26,456	0/0:26,0:24:9.34:0,9,149	0/0:13,0:13:1.24:0,1,3	0/0:9,3:12:2.49:0,2,5	0/0:14,0:14:1.27:0,1,3	0/0:13,0:13:14.96:0,15,183	0/0:18,0:17:24.43:0,24,500	0/1:20,0:20:7.32:7,0,410	1/1:7,0:4:7.67:145,8,0
chr10	95843159	.	CCACACACACACA	C	5918.69	PASS	AB=0.786;AC=28;AF=0.560;AN=50;BaseQRankSum=4.777;DP=538;FS=1.550;HRun=0;HaplotypeScore=188.1603;InbreedingCoeff=0.5113;MQ=64.47;MQ0=14;MQRankSum=-5.079;QD=19.86;ReadPosRankSum=-1.048;VQSLOD=3.6948;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:3.01:0,3,87	1/1:9,3:12:12.04:413,12,0	./.	./.	1/1:12,9:24:15.52:454,16,0	1/1:10,0:15:0.99:3,1,0	1/1:11,0:16:4.04:10,4,0	0/0:21,0:21:9.01:0,9,295	1/1:9,5:14:11.58:393,12,0	0/0:11,0:18:11.91:0,12,230	0/1:12,0:12:38.23:46,0,38	0/1:7,0:16:4.82:5,0,53	0/0:10,0:15:1.72:0,2,53	0/1:17,0:23:6.58:54,0,7	1/1:14,7:24:9.79:991,10,0	1/1:14,11:26:24.08:787,24,0	0/0:14,0:16:5.35:0,5,209	0/0:10,0:16:9.50:0,10,150	1/1:9,3:11:12.03:316,12,0	1/1:12,7:20:18.53:599,19,0	./.	1/1:8,0:15:9.23:56,9,0	0/0:17,0:17:8.99:0,9,95	0/0:12,0:16:11.77:0,12,169	1/1:8,8:16:18.06:594,18,0	0/1:13,8:22:99:478,0,116	1/1:16,10:26:21.07:722,21,0	0/0:10,0:10:24.08:0,24,1034
chr10	95844561	.	T	TTATA	45059.98	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.353;DP=739;FS=7.616;HRun=0;HaplotypeScore=151.7130;InbreedingCoeff=0.9978;MQ=87.02;MQ0=0;MQRankSum=-12.677;QD=66.56;ReadPosRankSum=8.354;VQSLOD=6.0672;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:31:66.18:1841,66,0	1/1:0,0:8:21.07:466,21,0	0/0:35,0:36:99:0,104,1981	0/0:26,0:26:72.13:0,72,1342	1/1:1,0:26:51.18:1108,51,0	1/1:2,22:26:66.23:1912,66,0	1/1:2,21:23:69.24:1982,69,0	1/1:8,0:35:99:2137,102,0	1/1:1,0:17:45.15:951,45,0	1/1:5,20:27:81.25:2171,81,0	1/1:3,22:25:66.23:1891,66,0	1/1:1,21:23:63.22:1813,63,0	1/1:3,29:32:90.31:2580,90,0	1/1:3,25:30:81.28:2328,81,0	1/1:1,0:20:51.18:1097,51,0	1/1:2,0:26:72.25:1517,72,0	1/1:4,30:36:93.32:2623,93,0	1/1:1,13:14:42.14:1207,42,0	1/1:3,0:30:90.28:1795,90,0	1/1:2,0:34:81.23:1709,81,0	1/1:3,0:21:45.15:928,45,0	1/1:2,23:26:75.26:2149,75,0	1/1:2,36:39:99:2952,102,0	1/1:1,18:19:54.19:1547,54,0	1/1:2,0:29:78.27:1629,78,0	1/1:3,1:30:90.25:1760,90,0	1/1:3,0:36:99:2142,99,0	1/1:1,0:13:39.13:827,39,0
chr10	95845177	.	GA	G	15605.38	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=5.919;DP=646;FS=0.000;HRun=8;HaplotypeScore=207.5573;InbreedingCoeff=0.9992;MQ=79.72;MQ0=0;MQRankSum=-9.182;QD=25.62;ReadPosRankSum=5.700;VQSLOD=2.2827;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:34:93.14:898,93,0	1/1:0,10:10:30.05:291,30,0	0/0:21,0:21:51.15:0,51,604	0/0:16,0:16:38.97:0,39,422	1/1:2,25:27:63.09:608,63,0	1/1:4,21:25:63.10:608,63,0	1/1:3,23:26:69.11:666,69,0	1/1:0,32:32:96.14:922,96,0	1/1:3,19:22:54.08:522,54,0	1/1:1,18:19:30.52:495,31,0	1/1:1,23:24:63.09:608,63,0	1/1:5,18:23:51.07:492,51,0	1/1:1,17:18:54.09:521,54,0	1/1:1,17:18:48.08:463,48,0	1/1:0,26:26:78.13:753,78,0	1/1:0,27:27:78.13:760,78,0	1/1:2,20:22:60.10:579,60,0	1/1:2,14:16:42.07:405,42,0	1/1:2,13:15:39.06:376,39,0	1/1:7,26:33:81.12:781,81,0	1/1:1,16:17:44.56:428,45,0	1/1:2,28:31:86.17:816,86,0	1/1:1,17:18:51.08:492,51,0	1/1:2,25:27:66.09:637,66,0	1/1:3,26:29:32.87:601,33,0	1/1:2,28:30:81.11:780,81,0	1/1:1,27:28:78.12:753,78,0	1/1:0,12:12:36.06:348,36,0
chr10	95845234	.	TGCATACACACACACACACACAC	T	15780.44	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=3.010;DP=661;FS=1.864;HRun=0;HaplotypeScore=463.8730;InbreedingCoeff=0.9847;MQ=54.32;MQ0=6;MQRankSum=-11.883;QD=73.06;ReadPosRankSum=5.016;VQSLOD=3.1784;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:65:0,65,3736	0/0:6,0:6:18.04:0,18,804	0/0:35,0:16:36.12:0,36,1363	0/0:24,0:14:33.09:0,33,1660	0/0:24,0:24:51.17:0,51,2813	1/1:9,14:23:12.04:649,12,0	1/1:9,10:19:33.11:1778,33,0	0/0:35,0:35:93.32:0,93,3693	0/0:32,0:32:81.28:0,81,5091	1/1:9,7:16:45.15:1763,45,0	1/1:11,9:20:18.06:1010,18,0	1/1:10,19:29:45.11:2527,45,0	1/1:6,11:17:33.11:1834,33,0	1/1:4,7:11:24.08:1441,24,0	0/0:29,0:29:57.19:0,57,3219	0/0:33,0:33:75.23:0,75,4225	1/1:6,5:11:18.02:920,18,0	1/1:7,0:7:11.78:182,12,0	0/0:28,0:28:69.22:0,69,3537	0/0:32,0:32:72.23:0,72,3756	0/0:33,0:33:55.50:0,55,3679	1/1:11,10:22:24.08:1255,24,0	1/1:7,10:17:27.09:1515,27,0	1/1:18,6:24:18.06:906,18,0	0/0:20,0:20:45.15:0,45,2395	0/0:36,0:36:93.32:0,93,5651	0/0:31,0:31:78.25:0,78,4323	0/0:11,0:11:18.06:0,18,1106
chr10	95845238	.	TACAC	T	14103.63	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=0.396;DP=650;FS=17.122;HRun=0;HaplotypeScore=265.2842;InbreedingCoeff=0.8688;MQ=49.67;MQ0=7;MQRankSum=0.253;QD=24.19;ReadPosRankSum=4.261;VQSLOD=3.1946;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,23:37:56.78:904,57,0	1/1:4,3:7:18.05:272,18,0	0/0:37,0:16:21.07:0,21,443	0/0:22,0:12:14.23:0,14,403	1/1:8,16:24:42.14:694,42,0	1/1:21,0:21:9.01:84,9,0	1/1:19,0:19:26.77:234,27,0	1/1:12,22:35:63.17:953,63,0	1/1:6,26:34:75.24:1227,75,0	1/1:15,0:16:23.90:211,24,0	1/1:19,0:19:15.02:140,15,0	1/1:27,0:27:41.87:374,42,0	1/1:16,0:16:29.82:263,30,0	1/1:11,0:11:24.03:222,24,0	1/1:8,20:28:45.11:736,45,0	1/1:9,23:32:69.24:1164,69,0	1/1:11,0:11:15.02:138,15,0	./.	1/1:5,18:26:28.14:817,28,0	1/1:15,18:33:32:891,32,0	1/1:3,30:33:50.91:869,51,0	1/1:22,0:22:15.02:140,15,0	1/1:17,0:17:24.03:224,24,0	1/1:23,0:23:5.38:103,5,0	1/1:5,15:20:33.10:536,33,0	1/1:10,27:37:90.31:1529,90,0	1/1:5,23:28:69.20:1121,69,0	1/1:2,5:7:15.05:256,15,0
chr10	95845240	.	C	CT	573.29	PASS	AB=0.734;AC=10;AF=0.179;AN=56;BaseQRankSum=-0.851;DP=634;FS=0.769;HRun=0;HaplotypeScore=274.6579;InbreedingCoeff=0.1829;MQ=49.73;MQ0=8;MQRankSum=-6.107;QD=3.98;ReadPosRankSum=-0.780;VQSLOD=2.9006;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:71.14:0,71,490	0/0:7,0:7:20.47:0,20,152	0/0:39,0:17:39.07:0,39,512	0/0:25,0:13:30.08:0,30,388	0/0:24,0:24:52.04:0,52,376	0/1:14,6:20:0.09:0,0,3	0/1:10,6:16:19.84:41,0,20	0/0:33,0:33:93.51:0,94,807	0/0:34,0:34:77.12:0,77,444	0/1:7,7:15:6.64:301,0,7	0/0:10,7:17:1.82:0,2,8	0/1:19,6:25:29.80:33,0,30	0/1:11,3:14:28.43:32,0,28	0/0:8,2:10:7.80:0,8,22	0/0:27,0:27:57.81:0,58,424	0/0:32,0:32:77.81:0,78,479	0/1:5,5:10:8.14:10,0,8	1/1:1,6:7:12.04:183,12,0	0/0:25,0:25:69.16:0,69,499	0/0:33,0:33:75.26:0,75,567	0/0:33,0:33:54.29:0,54,320	0/0:12,7:19:6.23:0,6,17	0/1:11,4:16:13.78:35,0,14	0/1:7,14:21:2.53:79,0,3	0/0:21,0:21:43.46:0,43,346	0/0:33,0:33:94.48:0,94,556	0/0:31,0:31:80.67:0,81,520	0/0:7,0:7:17.21:0,17,111
chr10	95845554	.	GAGAGAGAGACAGAGAGAGAGAGAC	G	944.46	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=1.274;DP=701;FS=4.421;HRun=0;HaplotypeScore=386.0051;InbreedingCoeff=0.0043;MQ=59.81;MQ0=7;MQRankSum=3.516;QD=3.30;ReadPosRankSum=-7.904;VQSLOD=0.0608;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,112,9753	0/0:12,0:12:8.54:0,9,199	0/0:21,0:11:6.31:0,6,142	0/0:49,0:22:27.66:0,28,524	0/0:29,0:29:5.51:0,6,132	0/1:18,0:18:99:114,0,2098	0/0:22,0:22:33.11:0,33,1896	1/1:17,13:28:34.35:595,34,0	0/0:30,0:30:36.11:0,36,761	0/1:27,0:27:42.05:42,0,3660	0/1:20,0:20:52.97:53,0,931	0/1:23,0:23:8.88:9,0,2505	0/1:34,0:33:91.83:92,0,4963	0/0:13,0:12:27.09:0,27,2321	0/0:21,0:21:12.51:0,13,267	0/0:22,0:22:21.07:0,21,476	0/0:23,0:23:45.15:0,45,3054	0/0:22,0:22:54.11:0,54,2964	0/1:17,0:16:7.74:8,0,743	0/1:23,0:23:12.61:13,0,437	0/0:37,0:37:10.95:0,11,476	0/1:29,0:29:30.76:31,0,1877	0/1:23,0:23:22.99:23,0,1507	0/0:22,0:22:39.06:0,39,3443	0/0:19,0:19:18.05:0,18,358	0/1:29,0:29:0.04:0,0,1717	0/0:21,0:21:15.05:0,15,333	1/1:3,10:13:3.01:119,3,0
chr10	95845566	.	GAGAGAGAGAGAC	G	6632.25	PASS	AB=0.793;AC=26;AF=0.464;AN=56;BaseQRankSum=6.447;DP=671;FS=0.426;HRun=0;HaplotypeScore=232.3129;InbreedingCoeff=0.6550;MQ=59.99;MQ0=11;MQRankSum=-3.343;QD=20.10;ReadPosRankSum=-4.395;VQSLOD=3.1504;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,123,5152	1/1:1,11:12:9.37:327,9,0	0/0:26,0:14:18.48:0,18,325	0/0:51,0:29:43.50:0,43,854	1/1:4,24:28:5.55:217,6,0	0/0:16,0:16:15.43:0,15,878	0/0:23,0:23:18.67:0,19,852	1/1:19,0:17:26.70:203,27,0	1/1:7,23:30:30.10:1088,30,0	0/1:27,0:27:5.87:6,0,1573	0/0:18,0:18:9.37:0,9,375	0/0:19,0:19:18.33:0,18,1015	0/0:32,0:32:36.65:0,37,2140	0/0:13,0:12:24.40:0,24,1165	1/1:1,21:22:11.65:434,12,0	1/1:3,14:17:15.05:544,15,0	0/0:26,0:26:24.57:0,25,1146	0/0:20,0:20:34.23:0,34,1297	1/1:8,11:17:34.89:636,35,0	1/1:2,20:22:24.08:798,24,0	0/1:10,23:33:29.30:29,0,80	0/1:25,0:25:14.92:15,0,929	0/0:22,0:22:18.05:0,18,555	0/0:22,0:22:38.85:0,39,1532	1/1:1,15:16:15.05:544,15,0	0/1:8,20:28:99:1230,0,235	1/1:3,17:20:14.67:544,15,0	1/1:12,0:12:2.94:18,3,0
chr10	95845578	.	C	CAG	8522.23	PASS	AB=0.841;AC=33;AF=0.589;AN=56;BaseQRankSum=-5.287;DP=626;FS=3.988;HRun=0;HaplotypeScore=135.0816;InbreedingCoeff=0.6723;MQ=66.17;MQ0=7;MQRankSum=3.116;QD=22.85;ReadPosRankSum=2.946;VQSLOD=5.5668;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,111,1392	0/0:11,0:11:1.44:0,1,15	0/0:33,0:20:36.02:0,36,413	0/0:47,0:31:40.82:0,41,741	0/1:24,0:24:1.75:6,0,2	1/1:3,12:15:27.09:459,27,0	0/1:2,22:24:2.55:525,0,3	1/1:14,0:14:34.36:550,34,0	0/0:23,0:23:25.74:0,26,99	1/1:3,27:31:81.06:1222,81,0	1/1:3,15:18:18.06:306,18,0	1/1:2,17:20:27.09:459,27,0	1/1:5,30:36:80.68:1265,81,0	1/1:1,11:11:27.09:459,27,0	0/0:21,0:21:1.67:0,2,22	0/0:14,0:14:12.88:0,13,49	1/1:5,26:31:39.13:663,39,0	1/1:2,17:21:43.96:719,44,0	1/1:13,0:12:13.40:226,13,0	0/1:20,0:21:25.58:26,0,34	0/0:25,0:25:4.46:0,4,75	1/1:6,19:25:27.09:443,27,0	1/1:5,11:16:12.04:204,12,0	1/1:5,15:20:31.86:516,32,0	0/0:15,0:15:4.12:0,4,30	1/1:20,2:22:18.36:423,18,0	0/0:17,0:17:4.26:0,4,32	1/1:10,0:10:3.01:51,3,0
chr10	95846099	.	CCTTGAG	C	35646.80	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=3.275;DP=687;FS=3.100;HRun=0;HaplotypeScore=176.5698;InbreedingCoeff=0.9820;MQ=83.58;MQ0=0;MQRankSum=-12.669;QD=57.40;ReadPosRankSum=7.438;VQSLOD=4.5109;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,32:36:72.25:1691,72,0	1/1:1,12:13:27.09:649,27,0	0/0:29,0:29:81.26:0,81,2519	0/0:37,0:37:98.79:0,99,2813	1/1:2,34:36:78.27:1788,78,0	1/1:0,23:23:60.21:1442,60,0	1/1:2,25:27:75.26:1781,75,0	1/1:4,27:31:81.28:1870,81,0	1/1:2,16:18:42.14:1003,42,0	1/1:2,33:35:99:2448,102,0	1/1:1,19:20:54.19:1257,54,0	1/1:2,22:24:57.20:1360,57,0	1/1:1,23:24:60.21:1431,60,0	1/1:2,21:24:57.20:1356,57,0	1/1:1,22:23:63.22:1503,63,0	1/1:1,34:35:87.30:2078,87,0	1/1:2,18:20:36.12:819,36,0	1/1:2,11:13:24.08:577,24,0	1/1:0,10:10:30.10:682,30,0	1/1:2,33:35:93.32:2217,93,0	1/1:1,17:18:27.09:645,27,0	1/1:1,28:29:72.25:1688,72,0	1/1:0,25:25:57.14:1357,57,0	1/1:2,17:19:39.13:918,39,0	1/1:2,16:18:42.14:1001,42,0	1/1:1,25:26:72.25:1726,72,0	1/1:2,30:32:87.30:2072,87,0	1/1:0,7:7:12.04:288,12,0
chr10	95847023	.	G	GGTGTGTGTGTGTGT	11329.69	PASS	AB=0.840;AC=46;AF=0.821;AN=56;BaseQRankSum=0.437;DP=736;FS=49.929;HRun=0;HaplotypeScore=332.1689;InbreedingCoeff=0.6836;MQ=63.14;MQ0=3;MQRankSum=-1.628;QD=17.93;ReadPosRankSum=-4.560;VQSLOD=1.9227;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:44:99:0,105,2517	1/1:19,0:19:17.97:134,18,0	0/0:27,0:17:37.09:0,37,456	0/0:29,0:26:55.61:0,56,694	1/1:24,1:25:23.34:192,23,0	1/1:20,0:19:18.79:141,19,0	1/1:35,0:34:38.57:713,39,0	0/1:21,0:20:12.20:166,0,12	1/1:28,0:28:15.81:625,16,0	1/1:30,0:27:41.84:1144,42,0	1/1:12,0:11:8.83:80,9,0	1/1:32,0:32:27.33:473,27,0	1/1:23,1:22:29.12:440,29,0	1/1:31,0:30:26.49:480,26,0	1/1:28,0:28:33.76:422,34,0	1/1:14,10:31:12:644,12,0	1/1:29,0:29:35.21:733,35,0	1/1:11,0:11:16.45:667,16,0	1/1:20,0:19:30.41:561,30,0	1/1:21,0:21:21:275,21,0	1/1:45,0:43:27.03:261,27,0	1/1:38,0:37:8.16:379,8,0	1/1:34,0:31:10.87:410,11,0	1/1:26,0:26:17.66:204,18,0	1/1:26,0:25:18.30:206,18,0	1/1:27,0:27:68.79:1839,69,0	0/1:9,0:16:21.54:140,0,22	0/0:4,0:4:6.01:0,6,184
chr10	95847404	.	AT	A	11622.18	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.007;DP=529;FS=0.585;HRun=8;HaplotypeScore=104.9811;InbreedingCoeff=0.9667;MQ=73.68;MQ0=0;MQRankSum=-5.486;QD=24.73;ReadPosRankSum=2.569;VQSLOD=4.7888;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.23:0,75,906	1/1:0,8:8:18.03:174,18,0	0/0:18,0:17:32.81:0,33,312	0/0:14,0:13:10:0,10,227	1/1:4,13:17:36.05:348,36,0	1/1:0,30:30:90.15:869,90,0	1/1:0,16:16:36.06:347,36,0	1/1:3,27:30:81.11:776,81,0	1/1:2,10:12:21.03:203,21,0	1/1:2,24:26:69.10:666,69,0	1/1:2,12:14:30.04:290,30,0	1/1:2,19:21:54.09:521,54,0	1/1:2,15:17:45.07:434,45,0	1/1:1,13:14:39.06:377,39,0	1/1:1,31:32:87.14:840,87,0	1/1:4,26:30:66.06:629,66,0	1/1:2,19:21:57.09:550,57,0	1/1:0,13:13:39.06:377,39,0	1/1:4,12:16:36.05:348,36,0	1/1:1,15:16:39.06:376,39,0	1/1:1,9:10:27.04:261,27,0	1/1:2,18:20:51.08:492,51,0	1/1:1,19:20:42.07:405,42,0	1/1:0,5:5:12.02:116,12,0	1/1:2,17:19:51.08:492,51,0	1/1:2,25:27:75.11:719,75,0	1/1:0,21:21:63.10:608,63,0	1/1:1,14:15:42.07:406,42,0
chr10	95847738	.	TCA	T	6680.99	PASS	AB=0.737;AC=26;AF=0.464;AN=56;BaseQRankSum=23.033;DP=908;FS=30.670;HRun=0;HaplotypeScore=246.4027;InbreedingCoeff=-0.8633;MQ=39.52;MQ0=2;MQRankSum=-7.954;QD=7.83;ReadPosRankSum=5.292;VQSLOD=3.0547;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,14:36:99:304,0,957	0/1:9,5:14:81.99:82,0,437	0/0:29,0:21:63.22:0,63,1278	0/0:26,0:22:66.16:0,66,1087	0/1:18,16:33:99:123,0,830	0/1:19,15:32:99:360,0,937	0/1:21,16:37:99:261,0,1036	0/1:19,2:15:30.65:31,0,654	0/1:25,14:38:99:289,0,1111	0/1:21,14:31:99:566,0,908	0/1:15,7:22:77.13:77,0,662	0/1:31,16:45:99:267,0,1442	0/1:29,16:45:99:305,0,1453	0/1:25,22:44:99:395,0,1081	0/1:30,15:42:99:246,0,1386	0/1:29,14:42:99:483,0,1420	0/1:17,18:34:99:263,0,769	0/1:19,8:25:99:220,0,904	0/1:17,7:22:99:265,0,723	0/1:13,11:24:99:247,0,722	0/1:16,6:20:20.06:20,0,770	0/1:20,14:33:99:310,0,759	0/1:18,18:36:99:231,0,925	0/1:18,10:28:14.11:14,0,445	0/1:16,17:33:99:474,0,600	0/1:19,16:35:99:580,0,1017	0/1:34,12:44:99:247,0,1656	0/1:8,1:9:21.69:22,0,445
chr10	95847750	.	GTA	G	12229.64	PASS	AB=0.702;AC=27;AF=0.482;AN=56;BaseQRankSum=19.759;DP=857;FS=125.307;HRun=0;HaplotypeScore=221.0041;InbreedingCoeff=-0.7964;MQ=40.92;MQ0=5;MQRankSum=-6.917;QD=15.10;ReadPosRankSum=6.245;VQSLOD=2.0067;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,17:34:99:553,0,436	0/1:8,5:13:99:219,0,104	0/0:28,0:23:69.23:0,69,1357	0/0:19,0:17:44.29:0,44,855	0/1:18,19:36:99:504,0,212	0/1:20,16:33:99:577,0,303	0/1:17,18:35:99:621,0,341	0/1:14,2:10:73.53:74,0,305	0/1:21,17:37:99:551,0,440	0/1:18,15:30:99:660,0,595	0/1:13,7:20:99:215,0,289	0/1:28,18:44:99:589,0,561	0/1:25,17:42:99:654,0,587	0/1:20,22:39:99:828,0,296	0/1:24,15:36:99:596,0,447	0/1:26,16:41:99:575,0,703	0/1:11,18:28:99:624,0,153	0/1:15,9:22:99:293,0,562	0/1:12,8:19:99:285,0,511	0/1:10,14:24:99:396,0,216	0/1:11,8:18:99:177,0,345	0/1:17,16:32:99:543,0,312	0/1:16,21:37:99:669,0,299	1/1:17,11:27:8.99:121,9,0	0/1:14,19:33:99:658,0,203	0/1:17,20:37:99:710,0,763	0/1:31,15:44:99:510,0,781	0/1:6,1:7:27.68:28,0,315
chr10	95847753	.	G	GA	6797.77	PASS	AB=0.991;AC=36;AF=0.643;AN=56;BaseQRankSum=1.454;DP=870;FS=31.911;HRun=1;HaplotypeScore=662.7777;InbreedingCoeff=-0.3031;MQ=40.05;MQ0=5;MQRankSum=-4.682;QD=8.23;ReadPosRankSum=4.389;VQSLOD=1.7005;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,1:32:9.49:227,9,0	0/1:14,0:14:49.63:119,0,50	0/0:27,0:23:66.10:0,66,793	0/0:17,0:15:45.15:0,45,580	0/1:39,1:38:38.66:202,0,39	0/1:35,0:32:23.11:234,0,23	0/1:35,0:35:32.23:234,0,32	0/1:14,0:8:25.66:111,0,26	0/1:38,1:38:77.72:210,0,78	0/1:33,0:29:99:253,0,167	1/1:19,0:19:1.19:120,1,0	1/1:47,0:45:24.77:567,25,0	1/1:42,1:43:0.71:369,1,0	1/1:44,1:42:30.95:389,31,0	1/1:37,0:34:6.68:329,7,0	0/1:45,0:43:54.38:528,0,54	0/1:31,0:30:53.19:159,0,53	0/1:24,2:24:40:272,0,40	0/1:21,0:21:98.68:155,0,99	1/1:21,2:22:30.96:321,31,0	1/1:19,0:18:14.88:143,15,0	1/1:33,0:31:31.51:271,32,0	1/1:37,0:36:25.72:370,26,0	0/1:30,0:28:14.55:150,0,15	0/1:35,0:35:58.93:186,0,59	0/1:35,1:35:99:294,0,131	0/1:48,0:46:54.38:449,0,54	0/1:8,0:8:18.30:135,0,18
chr10	95848965	.	GGA	G	1997.58	PASS	AB=1.000;AC=44;AF=0.815;AN=54;BaseQRankSum=-4.865;DP=276;FS=0.670;HRun=0;HaplotypeScore=45.0436;InbreedingCoeff=0.2546;MQ=74.02;MQ0=0;MQRankSum=-2.924;QD=8.61;ReadPosRankSum=-2.912;VQSLOD=2.5212;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,2:20:10.54:230,11,0	1/1:5,0:5:5.15:45,5,0	0/0:14,0:12:27.21:0,27,254	0/0:14,0:10:15.20:0,15,221	1/1:5,1:6:15.34:131,15,0	1/1:6,0:6:2.99:24,3,0	1/1:13,0:13:3.41:132,3,0	1/1:14,1:15:32.44:238,32,0	1/1:13,0:13:7.76:107,8,0	1/1:10,0:10:12.49:64,12,0	1/1:5,0:5:2.50:9,2,0	0/1:11,0:11:24.25:49,0,24	1/1:5,0:5:5.85:33,6,0	0/1:8,0:8:27.41:27,0,52	1/1:12,0:12:10.87:73,11,0	1/1:11,1:12:9.56:161,10,0	0/1:18,0:18:45.29:45,0,150	0/1:6,0:6:27.15:51,0,27	1/1:4,1:5:14.95:132,15,0	1/1:6,0:6:11.44:91,11,0	./.	0/0:4,0:4:0.47:0,0,1	1/1:9,0:9:14.91:117,15,0	1/1:17,0:17:9.50:36,9,0	1/1:7,0:7:11.86:101,12,0	1/1:10,0:10:16.22:124,16,0	1/1:7,0:7:1.67:6,2,0	1/1:6,0:6:10.14:116,10,0
chr10	95848966	.	GA	G	3662.39	PASS	AB=0.500;AC=49;AF=0.907;AN=54;BaseQRankSum=-4.581;DP=262;FS=10.171;HRun=1;HaplotypeScore=34.4998;InbreedingCoeff=0.5632;MQ=75.60;MQ0=0;MQRankSum=-3.742;QD=16.50;ReadPosRankSum=-1.784;VQSLOD=1.9954;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,3:17:38.67:320,39,0	1/1:4,0:5:11.97:95,12,0	0/0:14,0:12:12.05:0,12,202	0/0:15,0:10:12.60:0,13,167	1/1:7,0:7:18.25:130,18,0	1/1:0,6:6:2.99:24,3,0	1/1:9,4:13:31.73:296,32,0	1/1:11,3:14:35.87:322,36,0	1/1:9,3:12:35.56:269,36,0	1/1:0,9:9:14.93:162,15,0	1/1:0,3:4:3.01:40,3,0	1/1:7,4:11:20.21:195,20,0	1/1:2,2:4:7.24:67,7,0	1/1:7,0:8:0.91:87,1,0	1/1:7,3:10:24.01:244,24,0	1/1:9,2:11:27.47:240,27,0	1/1:13,0:14:5.57:99,6,0	1/1:7,0:7:4.75:92,5,0	1/1:5,0:5:14.86:108,15,0	1/1:6,0:6:11.89:92,12,0	./.	0/1:0,4:4:0:0,0,0	1/1:6,2:8:14.91:117,15,0	1/1:0,16:16:15.03:189,15,0	1/1:7,0:7:16.95:124,17,0	1/1:8,3:11:17.97:148,18,0	1/1:0,7:7:6:62,6,0	1/1:6,0:6:17.92:141,18,0
chr10	95849624	.	ATTTGTTTGGT	A	28312.31	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=6.382;DP=653;FS=6.171;HRun=0;HaplotypeScore=261.5769;InbreedingCoeff=0.9476;MQ=75.50;MQ0=0;MQRankSum=-11.021;QD=49.76;ReadPosRankSum=7.131;VQSLOD=3.1408;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,22:35:72.24:2127,72,0	1/1:1,9:10:21.07:653,21,0	0/0:48,0:47:96.21:0,96,3323	0/0:36,0:33:70.17:0,70,2701	1/1:6,13:19:27.09:641,27,0	1/1:16,9:25:57.17:1241,57,0	1/1:20,5:25:57.18:1351,57,0	1/1:14,17:30:51.14:1209,51,0	1/1:4,27:31:63.22:1885,63,0	1/1:21,6:27:60.19:1383,60,0	1/1:11,8:19:42.14:1040,42,0	1/1:13,4:17:45.13:1047,45,0	1/1:18,6:24:57.19:1481,57,0	1/1:23,4:27:75.26:1842,75,0	1/1:6,25:31:56.80:1738,57,0	1/1:6,19:25:36.12:1006,36,0	1/1:7,5:12:27.09:672,27,0	1/1:7,1:8:9.03:207,9,0	1/1:13,14:27:42.13:967,42,0	1/1:9,25:34:63.21:1709,63,0	1/1:5,15:20:23.23:579,23,0	1/1:20,3:23:57.18:1274,57,0	1/1:15,8:23:45.13:856,45,0	1/1:15,5:20:29.08:644,29,0	1/1:4,8:12:21.07:638,21,0	1/1:12,9:21:21.07:620,21,0	1/1:3,14:17:39.13:1124,39,0	1/1:1,5:6:12.04:375,12,0
chr10	95849633	.	GT	G	5835.17	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=10.317;DP=590;FS=10.950;HRun=4;HaplotypeScore=219.3117;InbreedingCoeff=0.9237;MQ=68.19;MQ0=2;MQRankSum=-12.127;QD=11.72;ReadPosRankSum=7.245;VQSLOD=1.5836;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:58.89:216,59,0	1/1:10,0:10:17.10:62,17,0	0/0:49,0:45:99:0,101,1428	0/0:43,0:36:84.15:0,84,1105	1/1:13,1:14:25.25:147,25,0	1/1:15,8:23:53.45:350,53,0	1/1:15,9:24:53.75:408,54,0	1/1:23,0:22:42.37:246,42,0	1/1:28,0:28:50.96:184,51,0	1/1:15,11:26:56.53:435,57,0	1/1:8,7:15:39.89:266,40,0	1/1:8,9:17:41.57:284,42,0	1/1:9,14:24:53.94:396,54,0	1/1:4,21:25:72.35:553,72,0	1/1:27,0:27:45.59:160,46,0	1/1:21,0:21:29.74:114,30,0	1/1:6,4:10:25.17:172,25,0	1/1:5,1:6:8.38:69,8,0	1/1:21,0:21:34.56:210,35,0	1/1:30,0:30:54.41:255,54,0	1/1:18,0:18:20.03:97,20,0	1/1:8,13:21:56.03:438,56,0	1/1:13,7:20:42.91:289,43,0	1/1:12,7:19:28.35:194,28,0	1/1:10,0:10:17.32:69,17,0	1/1:10,0:10:17.33:64,17,0	1/1:16,0:16:32.18:126,32,0	1/1:5,0:5:9.49:32,9,0
chr10	95849635	.	T	TTG	5299.19	PASS	AB=0.993;AC=27;AF=0.482;AN=56;BaseQRankSum=1.789;DP=622;FS=9.715;HRun=0;HaplotypeScore=262.9524;InbreedingCoeff=-0.4532;MQ=63.40;MQ0=3;MQRankSum=-3.610;QD=10.27;ReadPosRankSum=0.055;VQSLOD=3.0929;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:40:99:387,0,263	0/0:9,0:9:19.57:0,20,90	0/0:48,0:42:76.11:0,76,1587	0/0:44,0:37:88.06:0,88,1279	0/1:15,0:15:52.94:53,0,130	1/1:23,0:23:22.16:589,22,0	0/1:27,2:29:91.58:368,0,92	0/1:29,0:28:99:372,0,155	0/1:28,0:28:99:101,0,165	1/1:23,1:24:12.78:423,13,0	0/1:16,0:16:8.83:200,0,9	0/1:17,1:18:39.01:214,0,39	0/1:23,0:23:1.55:102,0,2	0/1:28,0:28:39.21:78,0,39	0/1:28,0:28:99:100,0,181	0/1:20,0:20:78.58:128,0,79	0/1:14,0:14:74.87:108,0,75	1/1:9,0:9:10.51:104,11,0	0/1:17,0:17:41.13:407,0,41	0/1:28,0:28:99:249,0,156	0/1:20,0:20:30.62:289,0,31	0/1:24,1:25:36.55:244,0,37	0/1:19,0:19:2.80:405,0,3	0/1:20,0:20:34.15:163,0,34	0/1:12,0:12:27.01:27,0,89	0/1:14,0:14:72.10:116,0,72	0/1:17,0:17:70.92:71,0,123	0/0:5,0:5:11.19:0,11,50
chr10	95849638	.	GTTTGGT	G	12594.83	PASS	AB=0.891;AC=34;AF=0.607;AN=56;BaseQRankSum=14.376;DP=588;FS=3.080;HRun=0;HaplotypeScore=245.8034;InbreedingCoeff=-0.3661;MQ=61.32;MQ0=3;MQRankSum=-10.117;QD=25.50;ReadPosRankSum=13.511;VQSLOD=2.6248;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:36:99:716,0,299	0/1:10,0:10:40.04:223,0,40	0/0:51,0:44:99:0,123,3369	0/0:43,0:36:93.24:0,93,2531	0/1:15,0:15:99:145,0,202	1/1:10,7:18:46.61:673,47,0	0/1:19,7:29:99:689,0,168	0/1:25,0:25:99:328,0,455	1/1:28,0:28:12.63:663,13,0	1/1:11,8:21:1.79:700,2,0	1/1:9,6:16:3.11:584,3,0	0/1:9,8:18:25.70:619,0,26	1/1:6,14:21:57.19:1046,57,0	1/1:7,21:28:38.06:1359,38,0	0/1:27,0:27:55.42:595,0,55	1/1:19,0:19:35.87:375,36,0	0/1:9,4:13:99:308,0,127	0/1:4,1:5:42.41:83,0,42	0/1:17,0:17:99:282,0,160	0/1:26,0:26:99:534,0,106	0/1:17,0:17:89.52:181,0,90	0/1:10,13:24:57.57:833,0,58	0/1:10,7:17:0.18:424,0,0	0/1:9,7:16:44.43:323,0,44	0/1:12,0:12:99:204,0,217	0/1:15,0:15:99:198,0,389	0/1:16,0:16:82.65:369,0,83	1/1:5,0:5:12.04:142,12,0
chr10	95849660	.	C	CTGT	7699.12	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-0.270;DP=672;FS=6.525;HRun=0;HaplotypeScore=240.8984;InbreedingCoeff=0.9962;MQ=53.22;MQ0=7;MQRankSum=-3.950;QD=29.73;ReadPosRankSum=3.756;VQSLOD=3.8511;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:81.23:0,81,1129	0/0:13,0:13:39.11:0,39,548	0/0:47,0:31:43.96:0,44,702	0/0:38,0:31:52.78:0,53,708	0/0:22,0:22:51.10:0,51,663	1/1:13,4:21:27.09:432,27,0	1/1:12,17:30:60.20:1132,60,0	0/0:34,0:34:81.02:0,81,1045	0/0:31,0:31:51.16:0,51,750	1/1:13,7:21:45.11:664,45,0	1/1:17,1:19:36.09:498,36,0	1/1:11,10:21:42.14:708,42,0	1/1:21,0:21:48.14:630,48,0	1/1:25,13:38:78.26:1189,78,0	0/0:39,0:39:75:0,75,1022	0/0:23,0:23:45.05:0,45,569	1/1:12,4:16:24.06:370,24,0	1/1:2,12:14:24.08:474,24,0	0/0:13,0:12:33.06:0,33,433	0/0:22,0:22:54.17:0,54,798	0/0:23,0:23:30.07:0,30,397	1/1:16,8:24:51.16:769,51,0	1/1:8,5:13:27.02:484,27,0	1/1:12,9:21:21.96:349,22,0	0/0:12,0:12:27.09:0,27,410	0/0:19,0:19:57.01:0,57,713	0/0:23,0:23:57.09:0,57,767	0/0:6,0:6:15.03:0,15,205
chr10	95849872	.	AT	A	4364.03	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=9.800;DP=474;FS=3.755;HRun=5;HaplotypeScore=233.5795;InbreedingCoeff=0.6358;MQ=84.67;MQ0=7;MQRankSum=-9.929;QD=10.24;ReadPosRankSum=5.344;VQSLOD=1.4971;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,1:11:11.98:95,12,0	1/1:5,0:5:11.80:75,12,0	0/0:34,0:34:92.99:0,93,1164	0/0:14,0:14:36.12:0,36,481	1/1:34,0:34:44.17:284,44,0	1/1:16,0:16:26.54:168,27,0	1/1:10,0:9:11.81:76,12,0	1/1:17,3:18:20.78:162,21,0	1/1:15,1:16:30.88:230,31,0	1/1:20,0:19:35.56:245,36,0	1/1:20,0:23:1.04:78,1,0	1/1:11,0:10:26.58:170,27,0	1/1:18,0:17:35.54:236,36,0	1/1:12,0:11:21.20:142,21,0	1/1:21,1:22:47.37:313,47,0	1/1:19,1:20:38.51:271,39,0	1/1:11,0:11:11.81:76,12,0	1/1:4,0:4:2.97:20,3,0	1/1:9,1:10:14.80:108,15,0	1/1:31,0:30:50.19:320,50,0	1/1:5,1:5:2.95:19,3,0	1/1:30,0:29:53.21:348,53,0	1/1:17,0:17:32.44:219,32,0	1/1:11,1:11:3.12:32,3,0	1/1:19,0:19:35.46:232,35,0	1/1:25,1:25:38.23:235,38,0	1/1:15,2:16:23.70:174,24,0	1/1:4,0:4:5.89:38,6,0
chr10	95849874	.	T	TATCTCAG	26171.09	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=7.305;DP=328;FS=4.644;HRun=0;HaplotypeScore=157.8455;InbreedingCoeff=0.7747;MQ=99.20;MQ0=7;MQRankSum=-10.512;QD=93.47;ReadPosRankSum=5.807;VQSLOD=5.5963;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,6:8:21.07:742,21,0	1/1:0,4:4:12.04:479,12,0	0/0:35,0:35:98.99:0,99,2333	0/0:13,0:13:36.12:0,36,943	1/1:0,15:20:26.71:1681,27,0	1/1:0,8:9:27.09:1073,27,0	1/1:0,4:4:12.04:478,12,0	1/1:4,5:8:24.07:700,24,0	1/1:5,9:14:34.44:1206,34,0	1/1:3,10:14:36.12:1374,36,0	1/1:4,10:14:10.38:774,10,0	1/1:0,9:9:27.09:1075,27,0	1/1:0,11:13:36.12:1405,36,0	1/1:0,8:8:24.08:923,24,0	1/1:3,14:17:41.15:1776,41,0	1/1:3,11:14:42.13:1432,42,0	1/1:2,4:6:18.03:527,18,0	1/1:1,1:2:3.01:121,3,0	1/1:2,4:6:15.05:547,15,0	1/1:0,18:20:51.17:2002,51,0	1/1:2,1:2:6:143,6,0	1/1:0,18:20:54.18:2143,54,0	1/1:2,10:12:33.11:1230,33,0	1/1:3,2:4:9.03:306,9,0	1/1:2,12:14:39.12:1391,39,0	1/1:2,10:13:39.13:1434,39,0	1/1:2,7:10:24.08:948,24,0	1/1:1,2:3:9:261,9,0
chr10	95849879	.	T	TAAA	13467.74	PASS	AB=0.633;AC=50;AF=0.893;AN=56;BaseQRankSum=9.756;DP=307;FS=5.042;HRun=0;HaplotypeScore=182.8501;InbreedingCoeff=0.5437;MQ=94.15;MQ0=7;MQRankSum=-10.193;QD=50.63;ReadPosRankSum=8.144;VQSLOD=5.8023;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:3,6:8:0.76:294,0,1	1/1:0,4:4:12.04:252,12,0	0/0:28,0:28:70.86:0,71,1252	0/0:13,0:13:23.43:0,23,574	1/1:2,15:17:30.59:759,31,0	1/1:2,8:10:21.22:549,21,0	1/1:3,4:6:18.05:326,18,0	1/1:3,5:7:15.04:288,15,0	1/1:2,9:11:30.10:631,30,0	1/1:5,10:14:31.64:690,32,0	1/1:3,10:13:27.09:480,27,0	1/1:1,9:9:27.09:570,27,0	1/1:2,11:12:21.62:681,22,0	1/1:1,8:8:24.08:485,24,0	1/1:2,14:16:45.15:944,45,0	1/1:0,11:11:33.11:687,33,0	1/1:1,4:5:15.01:273,15,0	1/1:1,1:2:3.01:65,3,0	0/1:4,4:8:20.02:344,0,20	1/1:3,18:20:41.62:1073,42,0	1/1:1,1:1:3.01:63,3,0	1/1:3,18:20:54.19:1127,54,0	1/1:1,10:11:30.10:594,30,0	1/1:1,3:3:9.03:184,9,0	1/1:0,12:12:33.11:701,33,0	1/1:3,10:13:36.12:779,36,0	1/1:4,8:11:24.08:503,24,0	1/1:0,2:2:6.02:126,6,0
chr10	95850851	.	G	GTTT	5792.03	PASS	AB=1.000;AC=54;AF=0.964;AN=56;BaseQRankSum=-3.173;DP=599;FS=0.000;HRun=14;HaplotypeScore=123.1796;InbreedingCoeff=-0.0562;MQ=58.87;MQ0=2;MQRankSum=-2.125;QD=9.67;ReadPosRankSum=1.266;VQSLOD=2.1319;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:22.78:144,23,0	1/1:10,0:10:10.29:126,10,0	0/1:23,0:14:22.18:22,0,56	0/1:21,0:10:22.14:35,0,22	1/1:28,0:24:25.61:176,26,0	1/1:26,0:23:45.66:408,46,0	1/1:14,0:12:15.69:100,16,0	1/1:38,0:37:57.29:408,57,0	1/1:18,0:18:25.62:175,26,0	1/1:24,0:25:53.27:476,53,0	1/1:15,0:16:25.87:212,26,0	1/1:11,0:11:9.80:65,10,0	1/1:4,13:18:6.02:95,6,0	1/1:16,0:14:21.97:198,22,0	1/1:10,0:10:5.98:61,6,0	1/1:29,0:28:42.05:328,42,0	1/1:5,0:24:3.01:43,3,0	1/1:22,0:22:44.61:352,45,0	1/1:28,0:27:39.04:319,39,0	1/1:34,0:35:61.01:452,61,0	1/1:9,0:8:8.73:51,9,0	1/1:17,0:20:29.33:265,29,0	1/1:20,0:20:30.92:206,31,0	1/1:16,0:17:11.98:116,12,0	1/1:19,0:19:12.93:86,13,0	1/1:34,0:33:49.03:338,49,0	1/1:29,0:27:46.93:328,47,0	1/1:17,0:18:26.30:207,26,0
chr10	95850920	.	A	AT	19518.89	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.476;DP=483;FS=9.282;HRun=0;HaplotypeScore=121.1399;InbreedingCoeff=0.9802;MQ=70.84;MQ0=0;MQRankSum=-6.591;QD=41.98;ReadPosRankSum=4.457;VQSLOD=3.7404;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:57.19:844,57,0	1/1:0,10:10:30.07:425,30,0	0/0:12,0:12:33.09:0,33,442	0/0:6,0:6:11.93:0,12,142	1/1:0,16:16:48.12:691,48,0	1/1:0,26:26:72.24:1077,72,0	1/1:0,8:8:21.03:293,21,0	1/1:0,26:26:78.24:1121,78,0	1/1:0,13:13:33.11:492,33,0	1/1:0,20:20:60.20:896,60,0	1/1:1,21:22:63.21:933,63,0	1/1:0,11:11:30.10:449,30,0	1/1:1,12:13:36.12:527,36,0	1/1:0,11:11:33.11:493,33,0	1/1:0,12:12:33.07:468,33,0	1/1:0,21:21:60.20:893,60,0	1/1:0,20:20:57.19:858,57,0	1/1:0,13:13:39.13:592,39,0	1/1:0,14:14:39.13:578,39,0	1/1:0,31:31:90.30:1347,90,0	1/1:0,14:14:42.14:625,42,0	1/1:1,20:21:60.16:868,60,0	1/1:2,23:25:63.17:912,63,0	1/1:0,21:21:54.18:812,54,0	1/1:0,15:15:45.15:670,45,0	1/1:0,22:22:66.22:989,66,0	1/1:1,26:27:78.18:1125,78,0	1/1:0,12:12:36.12:539,36,0
chr10	95851495	.	G	GT	132.44	PASS	AC=10;AF=0.714;AN=14;BaseQRankSum=3.949;DP=60;FS=33.973;HRun=0;HaplotypeScore=33.7943;MQ=160.90;MQ0=4;MQRankSum=-3.779;QD=16.55;ReadPosRankSum=-4.147;VQSLOD=1.6996;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,1:2:5.91:50,6,0	./.	0/0:19,0:15:39.13:0,39,545	0/0:30,0:27:77.41:0,77,1017	./.	./.	./.	1/1:0,3:3:9.03:103,9,0	./.	./.	1/1:1,0:1:2.90:16,3,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:1,0:1:3.01:35,3,0	1/1:0,1:1:2.97:20,3,0	./.	./.	./.	./.	./.	./.	./.
chr10	95851496	.	AGC	A	266.35	PASS	AC=18;AF=0.818;AN=22;BaseQRankSum=4.396;DP=66;FS=15.550;HRun=0;HaplotypeScore=25.9475;InbreedingCoeff=0.4532;MQ=157.50;MQ0=3;MQRankSum=-4.067;QD=20.49;ReadPosRankSum=-4.859;VQSLOD=0.6230;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,1:2:5.99:56,6,0	./.	0/0:20,0:16:38.06:0,38,738	0/0:29,0:27:81.04:0,81,1486	./.	./.	./.	1/1:0,3:3:9.03:106,9,0	./.	1/1:1,0:1:3:28,3,0	1/1:1,0:1:2.97:20,3,0	./.	./.	1/1:1,0:1:3:25,3,0	./.	1/1:1,0:1:3:25,3,0	./.	./.	./.	1/1:1,0:1:3.01:36,3,0	1/1:1,1:2:5.98:47,6,0	1/1:1,0:1:3:25,3,0	./.	./.	./.	./.	./.	./.
chr10	95853047	.	G	GGAGACACT	21241.07	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-10.017;DP=519;FS=3.269;HRun=0;HaplotypeScore=122.0155;InbreedingCoeff=0.9837;MQ=90.72;MQ0=2;MQRankSum=-16.004;QD=89.25;ReadPosRankSum=3.583;VQSLOD=5.6668;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,15:33:45.15:1896,45,0	1/1:1,11:13:33.11:1397,33,0	0/0:28,0:28:75.17:0,75,1746	0/0:30,0:30:62.23:0,62,1442	1/1:5,11:16:33.11:1406,33,0	0/0:10,0:10:21.07:0,21,527	0/0:16,0:16:39.13:0,39,1045	0/0:31,0:31:75.21:0,75,1865	1/1:4,13:15:45.15:1825,45,0	0/0:19,0:19:57.20:0,57,1515	0/0:15,0:15:45.11:0,45,1111	0/0:12,0:12:33.11:0,33,886	0/0:14,0:14:33.11:0,33,886	0/0:10,0:10:21.07:0,21,564	1/1:5,16:22:54.19:2258,54,0	1/1:2,23:26:66.23:2817,66,0	0/0:20,0:20:45.15:0,45,1186	0/0:18,0:18:42.14:0,42,1127	1/1:7,12:20:42.14:1538,42,0	1/1:1,10:14:30.10:1273,30,0	1/1:2,2:7:6.02:256,6,0	0/0:13,0:13:33.10:0,33,785	0/0:19,0:19:48.16:0,48,1289	0/0:18,0:18:48.12:0,48,1191	1/1:6,17:24:54.19:2252,54,0	1/1:8,20:28:72.25:2928,72,0	1/1:2,14:17:33.11:1395,33,0	0/0:8,0:8:24.08:0,24,644
chr10	95853890	.	T	TGACC	22219.22	PASS	AB=0.559;AC=23;AF=0.411;AN=56;BaseQRankSum=-7.369;DP=787;FS=0.579;HRun=0;HaplotypeScore=157.4707;InbreedingCoeff=0.9251;MQ=76.25;MQ0=1;MQRankSum=-6.553;QD=57.71;ReadPosRankSum=3.034;VQSLOD=6.0035;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,54:57:99:3497,138,0	1/1:3,9:12:21.07:558,21,0	0/0:18,0:18:23.85:0,24,717	0/0:23,0:23:51.17:0,51,823	1/1:6,40:48:96.33:2504,96,0	0/0:18,0:18:54.18:0,54,982	0/0:20,0:20:54.17:0,54,959	0/0:34,0:34:81.26:0,81,1425	1/1:1,21:22:54.19:1437,54,0	0/0:29,0:29:78.22:0,78,1418	0/0:33,0:33:90.29:0,90,1607	0/0:29,0:29:81.28:0,81,1505	0/0:28,0:28:84.28:0,84,1525	0/0:28,0:28:84.27:0,84,1511	1/1:5,23:28:60.21:1584,60,0	1/1:5,27:33:72.21:1857,72,0	0/0:21,0:21:57.19:0,57,1011	0/0:20,0:20:57.20:0,57,1064	1/1:5,17:22:60.20:1490,60,0	1/1:3,27:30:75.26:1996,75,0	1/1:6,34:42:99:2637,99,0	0/0:27,0:27:81.26:0,81,1479	0/0:35,0:35:99:0,102,1842	0/0:31,0:31:90.31:0,90,1662	1/1:8,26:34:63.21:1621,63,0	0/1:7,24:33:74.13:1909,0,74	1/1:7,14:23:48.08:1129,48,0	0/0:8,0:8:24.08:0,24,448
chr10	95854547	.	CAA	C	11700.53	PASS	AB=0.600;AC=51;AF=0.911;AN=56;BaseQRankSum=-1.703;DP=539;FS=0.000;HRun=10;HaplotypeScore=90.3577;InbreedingCoeff=0.5877;MQ=57.24;MQ0=2;MQRankSum=1.776;QD=23.22;ReadPosRankSum=2.261;VQSLOD=4.5176;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,46:56:99:1360,109,0	1/1:2,3:4:6.01:67,6,0	0/0:17,0:10:6.02:0,6,88	0/0:18,0:4:2.84:0,3,14	1/1:4,18:22:45.10:502,45,0	1/1:3,16:19:42.11:468,42,0	1/1:5,18:23:42.10:468,42,0	1/1:7,27:32:75.05:809,75,0	1/1:0,13:13:33.09:368,33,0	1/1:5,19:23:54.11:586,54,0	1/1:5,13:18:36.08:401,36,0	1/1:0,11:11:27.07:301,27,0	1/1:2,10:12:21.05:234,21,0	1/1:4,15:19:33.08:368,33,0	1/1:4,15:19:42.10:468,42,0	1/1:4,16:20:36.08:401,36,0	1/1:2,24:26:63.17:701,63,0	1/1:1,12:13:30.05:322,30,0	0/1:4,8:12:11.75:240,0,12	1/1:2,12:14:33:351,33,0	1/1:3,5:8:12.02:134,12,0	1/1:1,13:14:36.09:399,36,0	1/1:3,13:16:33.09:366,33,0	1/1:3,20:23:45.11:502,45,0	1/1:7,16:23:27.05:301,27,0	1/1:1,19:22:51.07:626,51,0	1/1:5,26:31:56.98:724,57,0	1/1:0,7:7:21.06:234,21,0
chr10	95854862	.	G	GC	500.40	PASS	AB=0.979;AC=20;AF=0.357;AN=56;BaseQRankSum=0.939;DP=182;FS=0.000;HRun=0;HaplotypeScore=40.7409;InbreedingCoeff=0.5057;MQ=73.42;MQ0=0;MQRankSum=-1.416;QD=6.42;ReadPosRankSum=0.093;VQSLOD=3.0188;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,1:7:14.49:96,14,0	1/1:2,0:2:0.89:2,1,0	0/0:9,0:6:10.28:0,10,71	0/0:9,0:8:10.68:0,11,79	1/1:8,0:8:6.28:48,6,0	0/0:11,0:11:21.88:0,22,217	0/0:4,0:4:5.69:0,6,53	0/0:10,0:10:20.82:0,21,149	0/1:4,0:4:17.27:19,0,17	0/0:7,0:7:19.84:0,20,124	0/0:5,0:5:10.35:0,10,80	0/0:5,0:5:12.09:0,12,52	0/0:6,0:6:16.41:0,16,91	0/0:4,0:4:5.55:0,6,29	1/1:4,0:4:0.15:36,0,0	1/1:6,0:6:15.42:87,15,0	0/0:13,0:13:23.22:0,23,185	0/0:6,0:6:14.62:0,15,101	0/1:10,1:11:3.16:142,0,3	1/1:5,0:5:10.54:47,11,0	0/1:5,0:5:12.24:12,0,32	0/0:4,0:4:2.60:0,3,10	0/0:4,0:4:7.66:0,8,78	0/0:2,0:2:0:0,0,0	1/1:8,2:10:10.43:73,10,0	0/1:8,0:8:3.70:53,0,4	1/1:8,0:8:4.24:58,4,0	0/0:5,0:5:14.44:0,14,101
chr10	95854864	.	G	GCGC	2529.97	PASS	AB=0.831;AC=32;AF=0.571;AN=56;BaseQRankSum=-4.235;DP=188;FS=0.000;HRun=0;HaplotypeScore=45.2508;InbreedingCoeff=0.4235;MQ=70.56;MQ0=0;MQRankSum=-0.091;QD=20.57;ReadPosRankSum=1.092;VQSLOD=3.2045;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,3:8:18.01:294,18,0	1/1:0,2:2:3.01:63,3,0	0/0:9,0:6:6.54:0,7,115	0/0:9,0:8:17.22:0,17,174	1/1:5,3:8:12.03:183,12,0	0/0:11,0:12:17.28:0,17,147	0/1:1,0:4:4.45:4,0,17	0/1:12,0:12:26.45:28,0,26	1/1:2,2:4:8.97:142,9,0	0/0:4,0:7:0.23:0,0,11	0/1:3,0:5:2.04:2,0,12	1/1:3,0:4:7.48:29,7,0	0/1:4,0:7:9.99:36,0,10	0/1:4,0:4:4.25:5,0,4	1/1:2,2:4:12.04:210,12,0	1/1:2,3:6:18.06:323,18,0	0/0:10,0:12:6.58:0,7,46	0/1:6,0:6:12.82:42,0,13	1/1:8,3:11:21.89:416,22,0	1/1:1,4:6:12.02:173,12,0	1/1:3,2:6:5.49:49,5,0	0/0:0,0:4:0.47:0,0,1	0/0:4,0:5:6.41:0,6,19	0/0:2,0:2:0.89:0,1,2	1/1:3,6:10:12.02:214,12,0	1/1:2,5:8:15.03:232,15,0	1/1:1,6:8:14.78:257,15,0	0/0:4,0:5:8.10:0,8,22
chr10	95854909	.	GTT	G	5474.83	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.749;DP=248;FS=1.365;HRun=11;HaplotypeScore=41.3738;InbreedingCoeff=0.6645;MQ=67.75;MQ0=5;MQRankSum=-2.281;QD=25.46;ReadPosRankSum=3.098;VQSLOD=4.2020;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:36.09:383,36,0	1/1:0,2:2:6.02:64,6,0	0/0:18,0:8:15.04:0,15,192	0/0:14,0:10:14.56:0,15,127	1/1:1,8:10:23.79:235,24,0	1/1:4,8:12:18.01:191,18,0	1/1:0,2:2:6.02:64,6,0	1/1:8,19:27:57.08:597,57,0	1/1:0,3:3:9.02:96,9,0	1/1:1,9:9:24.05:255,24,0	1/1:0,7:7:21.05:223,21,0	1/1:1,7:8:21.05:223,21,0	1/1:2,8:10:24.04:255,24,0	1/1:0,3:3:9.02:96,9,0	1/1:1,4:5:9.01:96,9,0	1/1:0,6:6:18.05:192,18,0	1/1:4,17:21:51.08:541,51,0	1/1:1,10:11:27.06:287,27,0	1/1:2,9:11:30.06:310,30,0	1/1:0,3:3:9.02:96,9,0	1/1:0,3:3:9.02:96,9,0	1/1:0,2:2:6.02:64,6,0	1/1:1,3:4:9.02:96,9,0	1/1:0,2:2:6.02:64,6,0	1/1:4,8:12:21.03:217,21,0	1/1:0,14:14:39.08:414,39,0	1/1:1,7:7:18.04:192,18,0	1/1:1,5:6:12.03:128,12,0
chr10	95855948	.	T	TACATACACACACACACAC	5033.39	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=-8.273;DP=510;FS=1.797;HRun=0;HaplotypeScore=213.1599;InbreedingCoeff=0.1995;MQ=48.23;MQ0=12;MQRankSum=3.607;QD=13.14;ReadPosRankSum=0.392;VQSLOD=3.9452;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:14.79:183,15,0	1/1:5,0:5:9:125,9,0	0/0:51,0:20:36.69:0,37,355	0/0:43,0:20:48.17:0,48,422	1/1:16,0:14:20.95:168,21,0	0/1:17,0:16:76.10:131,0,76	0/1:17,0:16:89.74:199,0,90	0/1:39,0:37:99:438,0,531	1/1:2,7:21:3.95:262,4,0	0/1:15,0:15:99:124,0,200	0/1:12,0:11:99:232,0,142	0/0:6,0:6:8.91:0,9,65	0/1:6,0:6:15.04:15,0,34	0/0:10,0:10:5.99:0,6,48	1/1:14,0:14:26.99:314,27,0	1/1:17,0:16:19.10:361,19,0	0/1:26,0:25:98.78:142,0,99	0/1:12,0:12:57.01:113,0,57	1/1:13,0:12:32.95:626,33,0	1/1:26,0:25:35.91:295,36,0	1/1:25,0:24:26.73:212,27,0	0/1:10,0:9:13.68:14,0,24	0/0:11,0:11:20.94:0,21,165	0/1:19,0:19:66.92:90,0,67	1/1:16,0:16:23.97:200,24,0	1/1:16,0:15:33.75:379,34,0	1/1:19,0:19:41.88:409,42,0	0/0:6,0:6:18.03:0,18,645
chr10	95855950	.	C	CAT	2151.43	PASS	AB=0.928;AC=20;AF=0.357;AN=56;BaseQRankSum=-7.995;DP=502;FS=13.086;HRun=0;HaplotypeScore=112.3427;InbreedingCoeff=0.3006;MQ=47.17;MQ0=12;MQRankSum=3.519;QD=8.44;ReadPosRankSum=3.547;VQSLOD=2.6866;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:11.82:95,12,0	1/1:5,0:5:9:82,9,0	0/0:48,0:18:47.09:0,47,391	0/0:45,0:20:51.05:0,51,441	0/1:13,3:14:2.94:123,0,3	0/1:15,0:14:1.80:2,0,84	0/0:17,0:16:3.16:0,3,124	0/1:37,1:36:36.80:441,0,37	0/1:14,0:14:25.05:25,0,40	0/0:16,0:16:25.45:0,25,266	0/0:12,0:11:14.65:0,15,160	0/0:6,0:6:8.91:0,9,65	0/0:7,0:7:8.95:0,9,68	0/0:10,0:10:5.99:0,6,48	0/1:13,0:13:21.75:168,0,22	0/1:16,1:16:3.16:116,0,3	0/0:27,0:26:4.34:0,4,112	0/0:12,0:12:3.11:0,3,96	0/1:7,6:13:10.64:132,0,11	1/1:26,0:25:34.74:293,35,0	1/1:24,0:23:3.02:164,3,0	0/0:10,0:9:4.64:0,5,29	0/0:11,0:11:20.94:0,21,165	0/0:20,0:20:18.58:0,19,142	1/1:16,0:16:23.97:200,24,0	0/1:16,0:15:4.64:208,0,5	1/1:19,0:19:0.95:274,1,0	0/0:6,0:6:16.40:0,16,78
chr10	95856518	.	CGTGTGT	C	868.48	PASS	AB=0.856;AC=18;AF=0.333;AN=54;BaseQRankSum=5.817;DP=582;FS=8.393;HRun=0;HaplotypeScore=162.0692;InbreedingCoeff=0.3849;MQ=72.03;MQ0=8;MQRankSum=-4.040;QD=3.56;ReadPosRankSum=0.094;VQSLOD=2.2336;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:36:9.03:122,9,0	0/0:4,0:5:9.03:0,9,248	0/0:37,0:23:0.94:0,1,2	./.	0/0:27,0:28:36.09:0,36,762	1/1:13,3:16:2.96:19,3,0	1/1:20,1:23:9.23:107,9,0	0/0:38,0:36:4.34:0,4,25	0/0:11,0:11:18.04:0,18,396	0/1:22,0:22:2.74:37,0,3	0/1:7,2:10:11.44:93,0,11	0/1:13,2:15:21.12:52,0,21	0/1:15,5:20:13.92:111,0,14	1/1:14,1:16:12.03:185,12,0	0/0:27,0:28:36.06:0,36,730	0/0:13,0:17:33.09:0,33,794	0/1:21,0:29:7.43:39,0,7	0/1:16,0:17:29.49:29,0,48	0/0:15,0:15:8.97:0,9,76	0/0:10,0:15:17.85:0,18,395	0/0:27,0:27:24.07:0,24,552	0/0:11,3:14:0.89:0,1,2	1/1:4,6:10:6.02:121,6,0	1/1:24,4:26:6.02:122,6,0	0/0:13,0:15:21.06:0,21,440	0/0:29,0:29:24.96:0,25,440	0/0:24,0:24:46.19:0,46,711	0/0:5,0:8:8.95:0,9,120
chr10	95858000	.	CACACACACACACACACAA	C	5549.23	PASS	AB=0.958;AC=33;AF=0.589;AN=56;BaseQRankSum=1.780;DP=497;FS=5.514;HRun=0;HaplotypeScore=179.0136;InbreedingCoeff=0.0266;MQ=50.91;MQ0=18;MQRankSum=-1.428;QD=12.58;ReadPosRankSum=-1.360;VQSLOD=3.5102;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:54.76:55,0,671	0/0:4,0:4:6.02:0,6,309	0/0:8,0:3:9.02:0,9,96	0/0:17,0:10:30.04:0,30,388	0/1:8,0:8:30.84:31,0,452	1/1:2,17:19:9.03:469,9,0	1/1:4,22:26:5.96:313,6,0	0/1:27,0:24:80.70:81,0,1096	0/0:14,0:14:0.09:0,0,707	1/1:4,14:16:29.24:421,29,0	1/1:3,8:11:8.90:193,9,0	1/1:1,11:12:12.04:625,12,0	1/1:5,10:15:6.59:463,7,0	1/1:9,20:29:11.59:625,12,0	0/1:21,0:21:47.77:48,0,1333	0/1:19,0:19:92.53:93,0,1487	1/1:10,28:38:14.50:781,14,0	0/1:2,13:15:58.80:151,0,59	0/1:12,0:10:29.26:29,0,251	0/0:10,0:10:15.52:0,16,809	0/1:41,0:38:99:184,0,1696	1/1:3,9:12:11.93:599,12,0	1/1:3,10:12:7.85:191,8,0	1/1:4,24:27:3.39:18,3,0	0/1:19,0:19:59.70:60,0,1232	0/1:20,0:18:99:114,0,828	0/1:25,0:23:6.14:6,0,1889	0/0:3,0:3:3.01:0,3,142
chr10	95858014	.	CACAA	C	5182.72	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=3.375;DP=428;FS=12.339;HRun=0;HaplotypeScore=85.4901;InbreedingCoeff=0.4029;MQ=61.86;MQ0=14;MQRankSum=-5.010;QD=13.22;ReadPosRankSum=5.614;VQSLOD=2.8532;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:15:129,0,15	1/1:3,1:4:6.02:88,6,0	0/0:12,0:10:29.92:0,30,307	0/0:24,0:20:53.20:0,53,591	1/1:4,1:5:14.99:137,15,0	1/1:17,0:17:9.03:118,9,0	1/1:22,0:22:5.79:78,6,0	1/1:22,0:19:43.96:371,44,0	1/1:10,1:11:23.91:272,24,0	1/1:18,0:16:29.68:253,30,0	1/1:9,0:9:5.93:56,6,0	1/1:11,0:11:12.04:157,12,0	1/1:11,0:11:8.38:117,8,0	1/1:20,0:20:11.68:157,12,0	1/1:11,2:13:32.52:349,33,0	1/1:13,6:19:54.02:674,54,0	1/1:31,0:31:14.35:195,14,0	1/1:14,0:14:2.99:40,3,0	1/1:12,0:10:20.53:136,21,0	0/1:8,0:8:8.98:79,0,9	1/1:31,0:29:53.91:432,54,0	1/1:10,0:10:11.04:151,11,0	1/1:12,0:11:6.20:56,6,0	1/1:26,0:25:2.92:17,3,0	1/1:18,0:18:26.95:235,27,0	1/1:14,0:13:38.97:348,39,0	1/1:21,0:20:47.53:479,48,0	1/1:0,2:2:3.01:60,3,0
chr10	95858097	.	G	GCCTTATCTAC	18003.66	PASS	AB=0.575;AC=23;AF=0.411;AN=56;BaseQRankSum=-7.072;DP=498;FS=17.660;HRun=0;HaplotypeScore=135.4877;InbreedingCoeff=0.9222;MQ=83.90;MQ0=0;MQRankSum=-12.694;QD=82.97;ReadPosRankSum=0.107;VQSLOD=3.9091;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,12:23:36.12:1838,36,0	1/1:0,8:9:21.07:1076,21,0	0/0:16,0:16:33.04:0,33,942	0/0:30,0:30:57.16:0,57,1481	1/1:5,11:27:36.08:1317,36,0	0/0:13,0:13:24.08:0,24,756	0/0:13,0:13:39.10:0,39,1021	0/0:31,0:31:84.20:0,84,2199	1/1:5,8:14:30.10:1235,30,0	0/0:13,0:13:39.13:0,39,1082	0/0:22,0:22:57.18:0,57,1552	0/0:15,0:15:38.98:0,39,1228	0/0:12,0:12:33.11:0,33,1037	0/0:15,0:15:27.09:0,27,849	1/1:4,11:18:42.09:2146,42,0	1/1:3,10:19:30:1520,30,0	0/0:33,0:33:75.26:0,75,2304	0/0:8,0:8:18.06:0,18,567	1/1:9,3:16:42.14:1568,42,0	1/1:3,7:20:30.06:1222,30,0	1/1:5,5:12:21.07:729,21,0	0/0:18,0:18:42.11:0,42,1150	0/0:19,0:19:48.03:0,48,1224	0/0:18,0:18:48.15:0,48,1368	1/1:4,10:17:33.11:1474,33,0	0/1:6,8:22:17.49:2204,0,17	1/1:2,11:19:32.96:1674,33,0	0/0:5,0:5:15.05:0,15,448
chr10	95859125	.	C	CA	18804.47	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.829;DP=602;FS=16.926;HRun=1;HaplotypeScore=127.8758;InbreedingCoeff=0.9876;MQ=71.62;MQ0=1;MQRankSum=-5.499;QD=34.31;ReadPosRankSum=6.231;VQSLOD=2.9374;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:31:72.17:953,72,0	1/1:0,13:13:36.12:497,36,0	0/0:29,0:24:59.64:0,60,626	0/0:25,0:16:17.96:0,18,314	1/1:3,30:33:92.86:1172,93,0	1/1:1,18:19:42.13:574,42,0	1/1:0,13:13:33.11:459,33,0	1/1:0,20:20:57.16:771,57,0	1/1:0,23:23:60.20:817,60,0	1/1:0,23:23:69.19:908,69,0	1/1:11,2:13:26.86:274,27,0	1/1:0,22:22:63.21:860,63,0	1/1:1,21:22:54.16:720,54,0	1/1:0,18:18:45.15:608,45,0	1/1:0,26:26:66.22:909,66,0	1/1:0,26:26:66.22:921,66,0	1/1:0,20:20:48.16:647,48,0	1/1:0,15:14:36.12:499,36,0	1/1:3,20:23:63.07:764,63,0	1/1:32,4:36:98.77:1211,99,0	1/1:0,20:20:51.17:709,51,0	1/1:0,23:24:63.17:853,63,0	1/1:3,14:18:23.89:484,24,0	1/1:0,7:7:21.07:292,21,0	1/1:0,26:26:60.20:825,60,0	1/1:1,15:16:45.12:595,45,0	1/1:0,35:35:90.30:1235,90,0	1/1:0,6:6:18.06:248,18,0
chr10	95859131	.	C	CA	20204.72	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=2.015;DP=592;FS=27.974;HRun=0;HaplotypeScore=120.1742;InbreedingCoeff=0.8238;MQ=69.48;MQ0=1;MQRankSum=-6.570;QD=35.63;ReadPosRankSum=4.286;VQSLOD=2.9280;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,1:27:75.14:1002,75,0	1/1:14,0:14:42.11:557,42,0	0/0:24,0:21:47.38:0,47,574	0/1:19,0:14:0.82:1,0,295	1/1:28,3:31:90.30:1275,90,0	1/1:17,0:17:45.14:616,45,0	1/1:16,0:16:39.10:510,39,0	1/1:20,0:20:60.17:788,60,0	1/1:25,0:25:65.94:883,66,0	1/1:24,0:24:69.15:904,69,0	1/1:2,12:14:20.53:218,21,0	1/1:23,0:23:69.20:929,69,0	1/1:22,0:22:60.17:814,60,0	1/1:17,0:17:45.15:632,45,0	1/1:25,0:25:66.22:928,66,0	1/1:25,0:25:72.21:970,72,0	1/1:23,0:23:60.13:775,60,0	1/1:13,0:13:39.11:529,39,0	1/1:25,0:25:75.15:915,75,0	1/1:4,34:38:96.26:1312,96,0	1/1:21,0:21:63.14:800,63,0	1/1:25,0:25:66.20:911,66,0	1/1:18,0:18:51.11:642,51,0	1/1:8,0:8:24.05:316,24,0	1/1:22,0:22:60.20:844,60,0	1/1:15,0:15:45.13:601,45,0	1/1:34,0:34:93.29:1275,93,0	1/1:6,0:6:18.06:255,18,0
chr10	95859850	.	G	GAA	8531.97	PASS	AB=0.917;AC=52;AF=0.929;AN=56;BaseQRankSum=1.636;DP=405;FS=14.196;HRun=8;HaplotypeScore=120.7502;InbreedingCoeff=0.2759;MQ=36.46;MQ0=10;MQRankSum=-2.655;QD=21.49;ReadPosRankSum=0.661;VQSLOD=2.3774;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,26:35:77.54:1051,78,0	1/1:6,3:9:17.87:151,18,0	0/0:8,0:2:6.02:0,6,66	0/1:8,0:5:25.08:25,0,84	1/1:12,8:21:33.05:423,33,0	1/1:6,5:11:12.04:190,12,0	1/1:2,5:6:12.04:190,12,0	1/1:7,9:16:30.54:450,31,0	1/1:11,8:19:29.99:409,30,0	1/1:13,5:16:27.02:327,27,0	1/1:9,7:16:26.02:313,26,0	1/1:11,3:11:15.04:177,15,0	1/1:3,7:9:12.01:164,12,0	1/1:5,6:9:5.50:43,6,0	1/1:12,8:20:33.06:433,33,0	1/1:6,8:12:24.04:353,24,0	1/1:6,1:7:8.31:39,8,0	0/1:3,1:3:6.22:35,0,6	1/1:14,8:20:38.58:546,39,0	1/1:9,11:20:48.07:659,48,0	1/1:6,8:14:23.91:261,24,0	1/1:4,6:10:12.04:182,12,0	1/1:5,3:7:12:154,12,0	1/1:7,2:8:9.03:108,9,0	1/1:6,12:17:44.52:592,45,0	1/1:11,14:26:59.38:743,59,0	1/1:7,10:17:33.02:467,33,0	1/1:3,2:5:3.01:48,3,0
chr10	95859863	.	C	CAAAAAA	2378.57	PASS	AB=0.996;AC=39;AF=0.696;AN=56;BaseQRankSum=-5.547;DP=427;FS=0.484;HRun=9;HaplotypeScore=159.0096;InbreedingCoeff=-0.0434;MQ=44.31;MQ0=9;MQRankSum=-1.160;QD=6.02;ReadPosRankSum=-2.882;VQSLOD=-0.3047;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:41:99:137,0,332	0/1:9,0:9:1.79:2,0,97	0/1:19,0:10:7.57:8,0,102	0/0:11,0:8:24.08:0,24,393	0/1:18,0:18:16.22:60,0,16	1/1:6,1:14:6:104,6,0	1/1:16,0:11:8.96:82,9,0	1/1:21,0:18:17.97:170,18,0	0/1:15,0:15:0.65:1,0,128	1/1:5,13:15:26.94:402,27,0	1/1:15,0:13:10.73:97,11,0	1/1:9,0:6:9.03:144,9,0	1/1:9,0:8:11.65:73,12,0	1/1:5,0:3:5.85:73,6,0	0/0:21,0:21:8.72:0,9,230	0/1:16,0:14:7.23:7,0,152	1/1:10,0:7:15.36:157,15,0	0/1:5,0:2:28.36:28,0,41	0/1:15,0:14:23.70:24,0,113	0/1:21,0:21:58.20:134,0,58	0/1:12,0:12:27.16:27,0,74	1/1:9,1:9:6.02:136,6,0	1/1:4,0:13:12.04:231,12,0	1/1:9,0:6:12.42:177,12,0	0/1:21,0:19:20.41:20,0,213	0/1:24,0:24:95.66:96,0,193	0/1:19,0:19:17.47:17,0,138	1/1:5,0:5:6.02:138,6,0
chr10	95859871	.	AAGAAAG	A	6241.96	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=-1.373;DP=404;FS=14.822;HRun=0;HaplotypeScore=122.5332;InbreedingCoeff=-0.0471;MQ=54.16;MQ0=8;MQRankSum=-1.073;QD=17.29;ReadPosRankSum=1.627;VQSLOD=3.6807;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:38,2:39:89.24:967,89,0	1/1:9,0:9:18.02:214,18,0	0/0:24,0:14:39:0,39,699	0/0:14,0:10:30.06:0,30,786	1/1:16,0:16:29.10:331,29,0	0/1:12,0:12:30.84:31,0,36	0/1:16,0:11:25.96:66,0,26	0/1:19,0:16:29.42:29,0,215	1/1:12,2:14:29.89:424,30,0	0/1:17,0:14:99:121,0,240	1/1:7,0:5:0.77:48,1,0	0/1:8,0:5:48.34:80,0,48	0/0:5,0:4:5.97:0,6,74	0/1:6,0:4:32.34:32,0,35	1/1:19,0:19:30.33:500,30,0	1/1:12,1:12:33.02:422,33,0	0/1:8,0:5:30.47:87,0,30	0/1:5,0:3:41.48:41,0,85	1/1:17,0:16:47.08:475,47,0	1/1:20,0:20:47.03:444,47,0	1/1:12,0:12:4.34:213,4,0	0/1:5,0:4:25.17:25,0,30	0/1:16,0:14:52.96:53,0,93	0/1:8,0:6:28.49:28,0,59	1/1:19,0:20:34.03:566,34,0	1/1:24,0:24:10.41:586,10,0	1/1:23,0:23:38.45:428,38,0	0/1:6,0:6:27.56:31,0,28
chr10	95859872	.	AGAAAG	A	10766.04	PASS	AB=0.987;AC=39;AF=0.696;AN=56;BaseQRankSum=-4.722;DP=400;FS=20.674;HRun=0;HaplotypeScore=99.3966;InbreedingCoeff=-0.0719;MQ=55.99;MQ0=8;MQRankSum=-1.796;QD=29.82;ReadPosRankSum=0.304;VQSLOD=2.8206;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,30:39:95.94:1688,96,0	1/1:0,9:9:18.01:365,18,0	0/0:25,0:15:40.99:0,41,636	0/0:14,0:10:30.06:0,30,702	1/1:1,13:16:33.01:536,33,0	0/1:12,0:12:21.08:31,0,21	0/1:17,0:12:5.07:158,0,5	0/1:19,0:16:99:103,0,106	1/1:2,11:14:30.10:618,30,0	0/1:18,0:15:99:179,0,140	1/1:7,0:5:5.12:55,5,0	0/1:8,0:5:34.92:81,0,35	0/1:4,0:4:30.12:30,0,33	0/1:6,0:4:17.56:41,0,18	1/1:1,14:19:39.10:915,39,0	1/1:2,10:12:33.11:689,33,0	0/1:8,0:5:0.78:88,0,1	0/1:5,0:3:41.51:42,0,62	1/1:2,13:16:48.09:791,48,0	1/1:1,13:19:56.99:845,57,0	1/1:2,9:12:21.23:442,21,0	0/1:5,0:4:15.55:25,0,16	0/1:16,0:14:43.20:72,0,43	0/1:8,0:6:26.54:27,0,36	1/1:2,16:19:42.07:1006,42,0	1/1:6,12:22:26.59:1091,27,0	1/1:0,19:22:39.13:813,39,0	0/1:4,0:4:13.24:35,0,13
chr10	95859874	.	AAAG	A	3695.09	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=0.567;DP=407;FS=11.208;HRun=0;HaplotypeScore=115.4649;InbreedingCoeff=-0.0334;MQ=58.69;MQ0=7;MQRankSum=-2.159;QD=10.29;ReadPosRankSum=5.252;VQSLOD=2.3553;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:40,1:39:64.37:596,64,0	1/1:9,0:9:14.75:134,15,0	0/0:27,0:17:28.93:0,29,658	0/0:16,0:12:22.94:0,23,540	1/1:16,0:16:14.63:145,15,0	0/1:12,0:12:13.85:14,0,14	0/1:17,0:12:13.94:111,0,14	0/1:21,0:18:54.16:54,0,143	1/1:14,0:14:26.21:232,26,0	0/1:17,0:15:83.83:84,0,84	0/1:7,0:5:5.42:5,0,10	0/1:8,0:5:34.76:35,0,35	0/0:5,0:4:3.76:0,4,37	0/1:6,0:4:21.51:36,0,22	1/1:16,3:19:26.45:366,26,0	1/1:12,0:12:29.30:249,29,0	0/1:9,0:6:14.10:64,0,14	0/1:5,0:3:15.72:16,0,56	1/1:16,1:16:26:239,26,0	1/1:19,0:19:10.96:196,11,0	0/1:12,0:12:3.53:114,0,4	0/1:5,0:4:6.41:6,0,14	0/1:17,0:15:9.21:9,0,70	0/1:8,0:6:11.21:11,0,43	1/1:19,0:19:22.07:338,22,0	1/1:21,1:22:9.86:365,10,0	1/1:22,0:22:27.11:264,27,0	0/1:5,0:5:11.12:11,0,28
chr10	95860126	.	T	TACACACACACACAC	18560.87	PASS	AB=1.000;AC=46;AF=0.852;AN=54;BaseQRankSum=-2.158;DP=661;FS=1.556;HRun=0;HaplotypeScore=263.7516;InbreedingCoeff=0.6265;MQ=54.09;MQ0=4;MQRankSum=-6.705;QD=32.17;ReadPosRankSum=-0.361;VQSLOD=3.3614;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:3.94:264,0,4	1/1:8,0:8:3.01:73,3,0	0/0:35,0:27:27.06:0,27,514	0/0:26,0:26:21.02:0,21,436	1/1:17,5:22:9.50:514,10,0	1/1:18,6:26:17.99:877,18,0	1/1:29,4:34:8.55:506,9,0	1/1:33,0:26:30.09:890,30,0	1/1:18,7:25:35.15:2130,35,0	1/1:24,0:26:21.07:813,21,0	1/1:14,3:19:9.33:545,9,0	1/1:19,2:24:12.04:749,12,0	1/1:13,7:20:20.97:1223,21,0	1/1:18,3:23:9.50:546,10,0	1/1:30,4:35:18.06:1092,18,0	1/1:22,4:30:18.06:1124,18,0	0/0:18,0:18:45.09:0,45,1417	0/1:10,0:10:3.78:4,0,546	1/1:26,0:28:28.89:1035,29,0	1/1:20,4:26:24.08:1436,24,0	1/1:19,0:18:14.85:217,15,0	1/1:12,2:14:2.83:201,3,0	1/1:16,2:19:9.03:461,9,0	1/1:28,0:28:24.42:739,24,0	1/1:12,4:16:8.93:487,9,0	1/1:21,4:26:30.03:1327,30,0	1/1:22,5:29:27.09:1307,27,0	./.
chr10	95861178	.	TAAAAAAA	T	5897.46	PASS	AB=0.567;AC=21;AF=0.375;AN=56;BaseQRankSum=7.020;DP=488;FS=5.729;HRun=18;HaplotypeScore=115.5439;InbreedingCoeff=0.9075;MQ=65.41;MQ0=8;MQRankSum=-10.425;QD=32.76;ReadPosRankSum=5.752;VQSLOD=2.4453;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:63.19:0,63,1919	1/1:1,5:6:14.97:289,15,0	0/0:30,0:10:24.05:0,24,485	0/0:20,0:10:13.32:0,13,138	0/1:4,13:17:4.06:308,0,4	0/0:2,0:10:15.05:0,15,400	0/0:9,0:14:24.04:0,24,592	0/0:21,0:20:36.10:0,36,1041	1/1:2,16:18:35.91:692,36,0	0/0:4,0:13:30.10:0,30,787	0/0:4,0:13:21.54:0,22,547	0/0:15,0:20:45.14:0,45,1058	0/0:11,0:9:12.04:0,12,328	0/0:17,0:19:45.15:0,45,1134	1/1:2,15:17:42.02:806,42,0	1/1:2,11:14:29.94:542,30,0	0/0:15,0:19:45.15:0,45,1168	0/0:11,0:22:48.16:0,48,1352	1/1:8,12:19:35.66:578,36,0	1/1:7,8:15:11.10:212,11,0	1/1:7,5:12:5.73:115,6,0	0/0:8,0:14:30.10:0,30,760	0/0:8,0:18:43.82:0,44,846	0/0:7,0:17:33.10:0,33,849	1/1:2,15:17:32.94:637,33,0	1/1:6,21:27:62.95:1216,63,0	1/1:7,10:16:26.73:502,27,0	0/0:10,0:7:15.05:0,15,483
chr10	95861224	.	T	TAA	89.62	PASS	AB=0.700;AC=1;AF=0.018;AN=56;BaseQRankSum=3.322;DP=492;FS=2.044;HRun=0;HaplotypeScore=87.0174;InbreedingCoeff=-0.0196;MQ=57.12;MQ0=1;MQRankSum=-2.897;QD=12.80;ReadPosRankSum=0.571;VQSLOD=3.0584;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:54.18:0,54,869	0/0:6,0:6:12.04:0,12,195	0/0:20,0:15:45.15:0,45,692	0/0:23,0:19:43.90:0,44,613	0/0:13,0:13:30.10:0,30,486	0/0:16,0:16:39.13:0,39,633	0/0:18,0:18:45.11:0,45,703	0/0:33,0:33:84.27:0,84,1327	0/0:19,0:19:45.15:0,45,730	0/0:18,0:18:54.18:0,54,878	0/0:13,0:12:32.97:0,33,420	0/0:18,0:18:51.09:0,51,765	0/0:14,0:14:39.12:0,39,609	0/0:11,0:11:33.09:0,33,512	0/0:15,0:15:36.12:0,36,586	0/0:17,0:17:36.11:0,36,562	0/0:26,1:27:20.55:0,21,1186	0/0:17,0:17:43.85:0,44,714	0/0:18,0:18:54.14:0,54,851	0/0:14,0:14:39.13:0,39,635	0/0:19,0:19:36.09:0,36,534	0/0:12,0:11:30.06:0,30,460	0/0:11,0:11:24.08:0,24,391	0/0:20,0:20:57.17:0,57,903	0/0:23,0:23:66.23:0,66,1073	0/0:25,0:25:75.26:0,75,1212	0/0:18,0:18:54.18:0,54,878	0/1:4,3:7:99:164,0,124
chr10	95861557	.	GTGCTCTTGT	G	10078.77	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.618;DP=539;FS=2.912;HRun=0;HaplotypeScore=173.0102;InbreedingCoeff=0.9729;MQ=81.71;MQ0=0;MQRankSum=-14.502;QD=77.53;ReadPosRankSum=-0.793;VQSLOD=4.8541;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,5976	0/0:6,0:6:18.06:0,18,769	0/0:30,0:29:84.29:0,84,3622	0/0:28,0:28:73.71:0,74,2682	0/0:14,0:14:33.10:0,33,1404	1/1:0,18:18:54.19:1759,54,0	1/1:0,25:25:60.21:1914,60,0	0/0:31,0:31:87.30:0,87,4191	0/0:24,0:24:62.86:0,63,3144	1/1:0,11:11:27.09:880,27,0	1/1:0,12:12:27.09:834,27,0	1/1:0,16:16:39.13:1270,39,0	1/1:0,11:11:30.06:896,30,0	1/1:0,10:10:30.10:931,30,0	0/0:22,0:22:63.22:0,63,2977	0/0:23,0:23:69.24:0,69,3463	0/0:33,0:33:90.31:0,90,4535	0/0:21,0:20:57.15:0,57,2645	0/0:15,0:15:45.15:0,45,2198	0/0:28,0:28:81.28:0,81,3842	0/0:37,0:37:99:0,111,5277	1/1:0,8:7:21.07:618,21,0	1/1:0,10:10:21.05:684,21,0	1/1:0,9:9:9.03:293,9,0	0/0:15,0:15:42.14:0,42,2093	0/0:19,0:19:57.20:0,57,2856	0/0:18,0:17:54.19:0,54,2652	0/0:2,0:2:6.02:0,6,297
chr10	95861741	.	TA	T	12862.40	PASS	AB=0.929;AC=53;AF=0.946;AN=56;BaseQRankSum=-3.749;DP=599;FS=5.526;HRun=9;HaplotypeScore=71.4912;InbreedingCoeff=0.6086;MQ=69.44;MQ0=0;MQRankSum=-4.006;QD=21.84;ReadPosRankSum=2.941;VQSLOD=5.8645;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:29:69.03:631,69,0	1/1:3,9:12:27.01:247,27,0	0/1:12,1:13:6.41:6,0,184	0/0:9,0:10:9.35:0,9,173	1/1:4,23:27:37.42:597,37,0	1/1:7,24:31:66.03:604,66,0	1/1:3,14:17:42.01:384,42,0	1/1:7,30:37:87.04:796,87,0	1/1:3,17:20:45.02:412,45,0	1/1:3,22:25:66.03:604,66,0	1/1:3,26:29:71.98:650,72,0	1/1:4,23:27:54.02:494,54,0	1/1:1,11:12:33.02:301,33,0	1/1:1,16:17:48.03:439,48,0	1/1:3,20:23:54.02:494,54,0	1/1:1,10:11:27.01:247,27,0	1/1:2,23:25:69.03:631,69,0	1/1:3,12:15:36.02:329,36,0	1/1:2,9:11:27.01:247,27,0	1/1:3,33:36:92.98:838,93,0	1/1:4,19:23:54.03:494,54,0	1/1:2,24:26:37.37:588,37,0	1/1:4,25:29:72.03:659,72,0	1/1:2,16:18:36.02:329,36,0	1/1:2,21:23:57.03:522,57,0	1/1:2,23:25:69.03:631,69,0	1/1:1,26:27:71.99:659,72,0	1/1:0,1:1:3:27,3,0
chr10	95862548	.	GAA	G	6271.96	PASS	AB=0.702;AC=50;AF=0.893;AN=56;BaseQRankSum=-4.742;DP=519;FS=0.817;HRun=15;HaplotypeScore=62.0227;InbreedingCoeff=0.5408;MQ=56.41;MQ0=10;MQRankSum=-0.194;QD=12.93;ReadPosRankSum=2.444;VQSLOD=3.8009;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,28:37:59.36:557,59,0	1/1:4,6:10:17.82:158,18,0	0/0:21,0:3:8.76:0,9,70	0/0:13,0:5:5.99:0,6,63	1/1:6,18:25:9.83:410,10,0	1/1:4,16:21:23.54:300,24,0	1/1:3,17:18:32.99:291,33,0	1/1:4,1:15:27.73:114,28,0	1/1:4,9:13:17.59:144,18,0	1/1:2,14:16:38.95:337,39,0	1/1:2,11:14:32.70:268,33,0	1/1:2,13:15:12.53:230,13,0	1/1:2,9:12:17.64:142,18,0	1/1:6,9:15:11.85:105,12,0	1/1:6,17:23:26.74:282,27,0	1/1:4,14:17:32.78:290,33,0	1/1:11,21:35:10.84:305,11,0	1/1:12,10:21:46.14:348,46,0	1/1:4,18:22:49.40:421,49,0	1/1:9,14:23:31.86:299,32,0	1/1:6,9:17:14.32:214,14,0	0/1:8,5:13:1.16:134,0,1	0/1:8,5:12:14.64:43,0,15	1/1:5,9:15:17.49:188,17,0	1/1:3,8:11:15:132,15,0	1/1:13,5:19:26.57:246,27,0	1/1:9,14:24:26.48:267,26,0	1/1:2,0:8:10.96:47,11,0
chr10	95862960	.	AAC	A	2794.88	PASS	AB=0.965;AC=39;AF=0.696;AN=56;BaseQRankSum=-0.981;DP=607;FS=2.692;HRun=0;HaplotypeScore=144.1199;InbreedingCoeff=0.0747;MQ=62.82;MQ0=4;MQRankSum=8.231;QD=5.01;ReadPosRankSum=6.830;VQSLOD=2.6529;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:47,0:47:37.06:241,37,0	0/0:9,0:8:0.31:0,0,25	0/1:23,0:16:9.17:9,0,404	0/0:29,0:21:49.88:0,50,586	0/1:38,2:39:99:134,0,103	1/1:19,0:19:16.20:94,16,0	1/1:21,1:22:37.84:182,38,0	0/1:27,0:27:3.75:4,0,291	0/1:15,0:15:16.49:44,0,16	1/1:17,0:17:24.38:129,24,0	1/1:21,0:20:48.12:187,48,0	1/1:17,0:16:22.46:78,22,0	1/1:16,0:16:29.94:104,30,0	1/1:21,0:21:34.93:122,35,0	0/1:15,2:17:30.28:121,0,30	1/1:19,1:20:5.90:119,6,0	1/1:32,1:33:67.52:270,68,0	1/1:20,0:20:39.68:139,40,0	0/1:16,1:16:53.85:57,0,54	0/1:20,0:20:6.86:87,0,7	0/1:8,1:9:6.65:46,0,7	1/1:22,0:22:53.09:204,53,0	1/1:20,0:20:48.17:198,48,0	1/1:23,0:21:10.79:127,11,0	0/1:25,0:25:22.98:89,0,23	0/1:22,1:23:6.03:131,0,6	0/1:23,1:24:21.29:47,0,21	0/0:11,0:11:18.87:0,19,165
chr10	95862961	.	AC	A	15799.70	PASS	AB=0.940;AC=50;AF=0.893;AN=56;BaseQRankSum=-4.887;DP=594;FS=12.918;HRun=1;HaplotypeScore=88.0243;InbreedingCoeff=0.6007;MQ=62.96;MQ0=3;MQRankSum=-0.131;QD=29.10;ReadPosRankSum=4.555;VQSLOD=3.4289;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,44:47:87.94:1403,88,0	1/1:4,5:8:23.96:235,24,0	0/0:23,0:16:9.73:0,10,317	0/0:27,1:21:36.71:0,37,432	1/1:22,18:39:89.23:1014,89,0	1/1:1,17:18:35.94:539,36,0	1/1:1,21:22:57.10:750,57,0	0/1:25,1:26:56.84:89,0,57	1/1:11,3:14:41.90:419,42,0	1/1:1,16:17:44.02:607,44,0	1/1:4,17:20:57.11:752,57,0	1/1:0,16:15:27.09:377,27,0	1/1:0,16:16:36.12:502,36,0	1/1:0,20:20:42.14:586,42,0	1/1:11,5:16:41.70:464,42,0	1/1:15,4:19:57.03:643,57,0	1/1:1,32:33:81.23:1106,81,0	1/1:0,19:19:48.16:669,48,0	1/1:11,5:15:20.07:354,20,0	1/1:11,9:20:56.95:585,57,0	1/1:4,5:9:26.91:265,27,0	1/1:0,22:22:63.11:834,63,0	1/1:3,17:20:57.17:762,57,0	1/1:6,16:20:47.79:712,48,0	1/1:16,9:25:67.80:730,68,0	1/1:17,6:23:62.30:666,62,0	1/1:17,5:22:65.81:691,66,0	0/1:10,1:11:33.20:44,0,33
chr10	95862969	.	C	CA	5114.52	PASS	AB=0.969;AC=23;AF=0.411;AN=56;BaseQRankSum=-2.709;DP=618;FS=24.872;HRun=8;HaplotypeScore=132.8067;InbreedingCoeff=0.9305;MQ=68.56;MQ0=3;MQRankSum=-4.523;QD=20.30;ReadPosRankSum=-0.921;VQSLOD=3.0463;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,120,1077	1/1:5,5:9:26.47:211,26,0	0/0:26,0:19:45.85:0,46,371	0/1:30,0:25:11.30:11,0,245	1/1:24,19:42:96.33:835,96,0	0/0:17,0:17:42.02:0,42,383	0/0:25,1:26:49.26:0,49,515	0/0:30,0:30:72.33:0,72,640	1/1:9,4:13:33.57:269,34,0	0/0:19,0:19:48.01:0,48,435	0/0:21,0:20:54.75:0,55,481	0/0:18,0:17:33.02:0,33,301	0/0:15,0:15:36.01:0,36,324	0/0:19,0:19:45.01:0,45,405	1/1:8,8:16:47.04:400,47,0	1/1:13,5:18:53.45:515,53,0	0/0:33,0:33:78.03:0,78,707	0/0:21,0:21:48.03:0,48,437	1/1:6,10:15:45:464,45,0	1/1:12,7:19:46.79:385,47,0	1/1:5,5:10:26.39:236,26,0	0/0:22,0:22:60.03:0,60,546	0/0:20,0:20:60.03:0,60,547	0/0:21,0:19:51.02:0,51,466	1/1:19,8:28:53.10:535,53,0	1/1:18,6:24:60.25:605,60,0	1/1:17,7:24:70.41:648,70,0	0/0:8,0:8:24.01:0,24,220
chr10	95864983	.	TA	T	1665.36	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.995;DP=668;FS=4.603;HRun=1;HaplotypeScore=64.5482;InbreedingCoeff=0.9838;MQ=73.12;MQ0=0;MQRankSum=-1.447;QD=37.01;ReadPosRankSum=-2.480;VQSLOD=2.9621;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,154,2421	0/0:9,0:9:27.07:0,27,408	0/0:4,0:4:12.03:0,12,172	0/0:24,0:23:53.68:0,54,685	0/0:20,0:20:57.18:0,57,887	0/0:22,0:22:63.21:0,63,1007	0/0:30,0:30:90.31:0,90,1436	1/1:0,29:29:87.28:1200,87,0	0/0:24,0:24:72.23:0,72,1124	0/0:30,0:30:90.29:0,90,1398	0/0:18,0:18:48.16:0,48,767	0/0:20,0:20:60.20:0,60,957	0/0:17,0:17:51.17:0,51,815	0/0:26,0:26:78.25:0,78,1224	0/0:44,0:44:99:0,129,1992	0/0:26,0:26:78.27:0,78,1247	0/0:24,0:24:72.25:0,72,1151	0/0:14,0:14:42.14:0,42,663	0/0:26,0:26:75.24:0,75,1176	0/0:20,0:20:60.19:0,60,936	0/0:28,0:28:84.29:0,84,1343	0/0:23,0:23:66.21:0,66,1030	0/0:18,0:18:54.18:0,54,857	0/0:28,0:28:84.27:0,84,1319	0/0:15,0:15:45.15:0,45,717	0/0:26,0:26:78.26:0,78,1227	0/0:36,0:36:99:0,105,1679	1/1:0,16:16:42.14:587,42,0
chr10	95865239	.	T	TA	1987.66	PASS	AB=0.917;AC=5;AF=0.089;AN=56;BaseQRankSum=-9.935;DP=616;FS=14.498;HRun=8;HaplotypeScore=61.1125;InbreedingCoeff=0.7753;MQ=71.81;MQ0=0;MQRankSum=-1.536;QD=24.85;ReadPosRankSum=-3.524;VQSLOD=1.7834;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:93:0,93,841	0/0:9,0:9:24.01:0,24,220	0/0:12,0:12:14.21:0,14,116	0/1:10,0:11:21.10:27,0,21	0/0:30,0:30:78.01:0,78,705	0/0:20,0:20:57.02:0,57,517	0/0:13,0:13:35.98:0,36,318	1/1:6,35:41:99:1166,102,0	0/0:14,0:14:36.01:0,36,329	0/0:26,0:26:66.03:0,66,604	0/0:21,0:21:54.03:0,54,494	0/0:23,0:23:56.15:0,56,515	0/0:18,0:18:54.03:0,54,494	0/0:22,0:22:60.03:0,60,549	0/0:19,0:19:54.03:0,54,494	0/0:23,0:23:69.04:0,69,631	0/0:20,0:20:54.02:0,54,490	0/0:15,0:15:33.88:0,34,349	0/0:22,0:22:50.98:0,51,454	0/0:30,0:30:84.03:0,84,764	0/0:23,0:23:63.03:0,63,576	0/0:26,0:26:65.99:0,66,591	0/0:28,0:28:78:0,78,704	0/0:14,0:14:41.97:0,42,369	0/0:24,0:24:66:0,66,594	0/0:27,0:27:74.99:0,75,673	0/0:22,0:22:59.84:0,60,526	1/1:2,26:28:81.23:924,81,0
chr10	95867343	.	G	GA	749.73	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.801;DP=624;FS=4.872;HRun=10;HaplotypeScore=66.7197;InbreedingCoeff=0.9437;MQ=59.20;MQ0=0;MQRankSum=-0.809;QD=18.29;ReadPosRankSum=-3.375;VQSLOD=3.1346;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:48:97.85:0,98,794	0/0:8,0:8:23.94:0,24,193	0/0:9,0:7:14.49:0,14,106	0/0:6,0:5:14.77:0,15,110	0/0:23,0:26:66.03:0,66,509	0/0:20,0:20:50.78:0,51,416	0/0:22,0:22:44.90:0,45,369	1/1:10,25:34:72.65:768,73,0	0/0:25,0:24:62.90:0,63,517	0/0:21,0:19:47.94:0,48,394	0/0:13,0:13:32.95:0,33,271	0/0:24,0:24:50.93:0,51,419	0/0:21,0:22:55.95:0,56,446	0/0:20,0:18:35.92:0,36,293	0/0:35,0:35:86.87:0,87,714	0/0:26,0:26:71.91:0,72,591	0/0:33,0:29:71.87:0,72,588	0/0:23,0:22:55.91:0,56,443	0/0:27,0:27:49.55:0,50,382	0/0:21,0:22:52.90:0,53,417	0/0:20,1:21:15.89:0,16,334	0/0:14,0:14:32.94:0,33,268	0/0:19,0:19:50.93:0,51,419	0/0:20,0:18:44.91:0,45,369	0/0:26,0:29:72.01:0,72,556	0/0:25,0:25:56.90:0,57,468	0/0:20,0:21:40.96:0,41,326	1/1:2,4:6:9.02:96,9,0
chr10	95868198	.	AGACCC	A	1918.19	PASS	AB=0.964;AC=15;AF=0.278;AN=54;BaseQRankSum=-1.403;DP=322;FS=24.997;HRun=0;HaplotypeScore=87.2621;InbreedingCoeff=-0.3996;MQ=36.36;MQ0=9;MQRankSum=-0.676;QD=10.96;ReadPosRankSum=-2.067;VQSLOD=0.6507;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:17:18.66:0,19,268	0/0:4,0:2:5.81:0,6,46	0/0:7,0:1:3.01:0,3,35	./.	0/0:13,0:13:17.37:0,17,177	0/1:19,3:19:99:558,0,244	0/1:13,0:13:99:235,0,237	0/1:26,3:25:27.09:27,0,704	0/1:9,0:9:32.41:32,0,90	0/1:10,0:8:99:171,0,149	0/1:8,0:6:48.88:85,0,49	0/1:6,0:6:35.84:36,0,132	0/1:11,0:9:16.49:303,0,16	0/1:7,0:7:78.80:79,0,116	0/0:17,0:15:27.07:0,27,419	0/1:19,0:19:49.91:50,0,283	0/1:16,0:14:99:328,0,123	0/1:2,2:4:55.39:59,0,55	0/0:20,0:19:40.33:0,40,653	0/0:12,0:12:8.76:0,9,74	0/1:5,0:5:13.87:14,0,161	0/0:4,2:4:5.76:0,6,69	0/1:5,0:3:15.24:88,0,15	0/0:5,0:5:15.05:0,15,217	0/0:15,0:13:14.47:0,14,166	0/0:13,0:13:33.55:0,34,449	0/1:11,0:10:3.17:3,0,185	0/0:9,0:8:17.08:0,17,246
chr10	95868211	.	A	AAACAAAAAAAAAC	11493.31	PASS	AB=0.992;AC=44;AF=0.786;AN=56;BaseQRankSum=-1.038;DP=447;FS=7.934;HRun=0;HaplotypeScore=148.9288;InbreedingCoeff=0.1839;MQ=43.25;MQ0=9;MQRankSum=-2.463;QD=28.66;ReadPosRankSum=5.683;VQSLOD=3.2849;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:30:1.78:1047,2,0	1/1:5,0:4:11.93:173,12,0	0/0:26,0:5:14.85:0,15,151	0/0:15,0:4:2.54:0,3,47	1/1:4,12:22:17.62:565,18,0	0/1:28,0:26:31.97:546,0,32	0/1:12,0:12:41.44:224,0,41	0/1:35,0:31:99:102,0,195	1/1:2,7:15:10.44:284,10,0	1/1:15,0:12:5.20:244,5,0	1/1:10,0:7:7.47:95,7,0	1/1:6,0:6:0.40:40,0,0	0/1:16,0:14:10.50:307,0,11	0/1:4,0:4:1.29:82,0,1	1/1:4,14:19:15.37:753,15,0	1/1:18,0:18:41.49:917,41,0	1/1:14,0:13:24.24:426,24,0	1/1:3,0:3:1.35:40,1,0	1/1:25,0:24:35.77:1498,36,0	1/1:0,13:23:20.64:309,21,0	1/1:7,0:7:20.08:270,20,0	0/0:5,0:3:5.46:0,5,28	1/1:5,0:3:7.57:71,8,0	1/1:1,0:1:0.47:1,0,0	1/1:2,15:19:12.77:265,13,0	1/1:2,19:30:54.48:2402,54,0	1/1:15,0:16:33.11:610,33,0	0/1:18,0:18:99:223,0,144
chr10	95868212	.	A	AAC	1145.32	PASS	AB=0.971;AC=24;AF=0.429;AN=56;BaseQRankSum=2.025;DP=443;FS=29.154;HRun=0;HaplotypeScore=99.0597;InbreedingCoeff=-0.2361;MQ=43.70;MQ0=9;MQRankSum=-1.479;QD=3.74;ReadPosRankSum=3.424;VQSLOD=0.7043;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:33.57:34,0,54	0/1:6,0:4:13.88:15,0,14	0/0:27,0:6:14.89:0,15,142	0/0:15,0:4:5.83:0,6,52	0/1:21,0:21:12.94:13,0,66	0/1:28,0:26:51.22:267,0,51	0/1:12,0:12:60.95:109,0,61	0/0:35,0:31:75.82:0,76,649	0/1:14,0:14:2.89:16,0,3	0/1:15,1:13:49.57:59,0,50	1/1:11,0:8:11.67:96,12,0	0/1:3,5:8:10.99:53,0,11	0/1:17,0:15:10.12:131,0,10	0/1:4,0:4:6.29:46,0,6	0/1:20,0:19:41.15:41,0,64	0/0:18,0:18:18.26:0,18,168	1/1:14,0:13:17.34:188,17,0	1/1:3,0:3:5.96:45,6,0	0/1:23,1:23:88.74:89,0,122	0/0:22,0:22:13.72:0,14,71	0/1:7,0:7:0.48:0,0,33	0/1:5,0:3:9.91:10,0,14	0/1:5,0:3:9.06:9,0,18	0/0:1,0:1:0:0,0,0	0/1:19,0:17:7.47:7,0,23	0/1:28,0:29:59.85:70,0,60	0/1:16,0:16:7.35:7,0,52	0/0:19,0:18:42.85:0,43,345
chr10	95868213	.	A	AC	442.49	PASS	AB=0.854;AC=8;AF=0.143;AN=56;BaseQRankSum=1.330;DP=440;FS=2.060;HRun=0;HaplotypeScore=94.5430;InbreedingCoeff=-0.1355;MQ=44.17;MQ0=9;MQRankSum=-2.874;QD=3.09;ReadPosRankSum=1.668;VQSLOD=3.2226;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:23.96:24,0,51	0/1:4,2:4:5.15:5,0,34	0/0:27,0:6:17.86:0,18,163	0/1:14,0:4:8.24:8,0,47	0/1:19,0:19:11.17:11,0,106	0/0:28,0:26:59.13:0,59,333	0/0:12,0:12:17.65:0,18,146	0/0:36,0:32:80.60:0,81,726	0/0:14,0:14:3.48:0,3,25	0/0:17,0:14:26.43:0,26,193	0/0:11,0:8:8.88:0,9,34	0/0:8,0:8:2.22:0,2,47	0/0:17,0:15:31.34:0,31,183	0/0:4,0:4:9.65:0,10,39	0/0:21,0:20:1.08:0,1,29	0/0:15,2:17:21.98:0,22,196	0/0:13,0:12:15.14:0,15,76	0/0:4,0:4:5.34:0,5,21	0/1:16,7:22:99:228,0,129	0/0:22,0:22:22.30:0,22,147	0/1:4,3:8:9.11:75,0,9	0/0:5,0:3:5.81:0,6,34	0/0:5,0:3:8.64:0,9,49	0/0:1,0:1:0:0,0,0	0/0:17,0:15:8.93:0,9,70	0/1:29,0:29:99:152,0,170	0/1:10,7:17:64.49:64,0,96	0/0:18,0:17:44.29:0,44,371
chr10	95869168	.	TTGAATGAATGAA	T	12737.25	PASS	AB=0.612;AC=32;AF=0.571;AN=56;BaseQRankSum=11.279;DP=668;FS=2.545;HRun=0;HaplotypeScore=260.3972;InbreedingCoeff=0.5752;MQ=54.03;MQ0=0;MQRankSum=-11.682;QD=28.95;ReadPosRankSum=3.891;VQSLOD=4.0370;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:54.19:0,54,2699	1/1:1,7:8:15.05:506,15,0	0/0:17,0:13:6.02:0,6,262	0/0:23,0:20:29.13:0,29,979	1/1:6,28:34:59.94:1462,60,0	1/1:6,0:24:22.81:69,23,0	0/0:8,0:18:3.67:0,4,148	0/0:38,0:38:63.21:0,63,2832	1/1:7,17:24:36.12:1258,36,0	0/1:14,0:37:88.42:88,0,206	0/0:8,0:29:7.31:0,7,399	0/1:8,0:18:7.03:7,0,84	0/1:8,0:22:18.11:18,0,52	1/1:6,0:23:20.55:55,21,0	1/1:7,22:29:54.19:1870,54,0	1/1:9,23:32:44.98:1572,45,0	0/0:11,0:24:5.60:0,6,236	1/1:7,0:23:4.98:14,5,0	1/1:9,10:19:30.05:749,30,0	1/1:4,14:18:36.08:1088,36,0	1/1:20,11:31:8.96:177,9,0	0/0:4,0:18:2.28:0,2,172	0/1:5,0:19:13:13,0,24	0/0:11,0:24:2.59:0,3,47	1/1:6,13:19:27.09:943,27,0	1/1:12,19:31:57.19:1608,57,0	1/1:9,20:29:36.12:1239,36,0	0/0:11,0:12:30.10:0,30,1522
chr10	95870519	.	CTG	C	13277.73	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=16.665;DP=786;FS=3.917;HRun=0;HaplotypeScore=97.5522;InbreedingCoeff=0.9901;MQ=85.52;MQ0=0;MQRankSum=-2.864;QD=39.64;ReadPosRankSum=5.027;VQSLOD=7.0745;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,51:51:99:2157,141,0	1/1:0,10:10:30.10:459,30,0	0/0:38,0:38:86.71:0,87,1775	0/0:31,0:31:76.07:0,76,1383	1/1:0,21:21:60.20:917,60,0	0/0:21,0:21:63.21:0,63,1190	0/0:30,0:30:87.26:0,87,1571	0/0:19,0:19:57.17:0,57,1037	1/1:0,24:24:66.22:1010,66,0	0/0:34,0:34:96.32:0,96,1819	0/0:8,0:8:24.08:0,24,463	0/0:34,0:34:99:0,99,1868	0/0:34,0:34:99:0,102,1925	0/0:27,0:27:81.26:0,81,1519	1/1:2,33:35:87.30:1331,87,0	1/1:0,36:36:87.30:1331,87,0	0/0:47,0:46:99:0,132,2466	0/0:30,0:30:78.22:0,78,1455	1/1:2,20:22:60.17:859,60,0	1/1:1,19:20:55.44:867,55,0	1/1:2,42:44:99:1699,111,0	0/0:29,0:29:87.26:0,87,1611	0/0:18,0:18:54.19:0,54,1042	0/0:40,0:40:99:0,120,2306	1/1:3,17:20:48.16:735,48,0	1/1:4,22:26:8.28:903,8,0	1/1:1,25:26:66.22:1010,66,0	0/0:11,0:11:27.07:0,27,486
chr10	95870767	.	TTA	T	23616.36	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.130;DP=669;FS=8.121;HRun=0;HaplotypeScore=106.9122;InbreedingCoeff=0.9982;MQ=88.01;MQ0=0;MQRankSum=-10.923;QD=38.21;ReadPosRankSum=7.490;VQSLOD=6.5038;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,45:46:99:1853,126,0	1/1:1,8:9:24.04:328,24,0	0/0:20,0:20:48.14:0,48,772	0/0:31,0:31:80.56:0,81,1336	1/1:2,22:24:60.13:835,60,0	1/1:0,15:15:42.14:618,42,0	1/1:1,15:16:39.13:574,39,0	1/1:3,31:34:90.30:1324,90,0	1/1:0,15:15:42.14:618,42,0	1/1:1,25:26:75.22:1064,75,0	1/1:0,17:17:45.10:637,45,0	1/1:0,21:21:51.17:751,51,0	1/1:0,24:24:63.21:927,63,0	1/1:0,15:15:42.14:618,42,0	1/1:1,31:32:81.27:1193,81,0	1/1:1,21:22:60.20:883,60,0	1/1:1,30:31:81.27:1192,81,0	1/1:1,12:13:33.11:486,33,0	1/1:4,28:32:84.14:1179,84,0	1/1:2,26:28:69.23:1011,69,0	1/1:1,34:35:90.30:1325,90,0	1/1:0,18:18:45.11:638,45,0	1/1:0,20:20:51.13:724,51,0	1/1:2,25:27:63.14:927,63,0	1/1:1,12:13:27.09:398,27,0	1/1:1,22:23:66.21:952,66,0	1/1:0,32:32:93.31:1369,93,0	1/1:0,30:30:81.27:1192,81,0
chr10	95871851	.	C	CA	4656.30	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=-7.748;DP=550;FS=2.215;HRun=9;HaplotypeScore=55.3942;InbreedingCoeff=0.8705;MQ=60.60;MQ0=6;MQRankSum=-0.271;QD=18.48;ReadPosRankSum=1.582;VQSLOD=5.0903;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,1014	0/0:12,0:12:32.94:0,33,275	0/0:15,0:7:3.57:0,4,53	0/1:15,0:6:11.64:12,0,47	0/0:23,0:24:55.99:0,56,471	1/1:4,16:20:33.09:365,33,0	1/1:1,9:9:18.05:199,18,0	0/0:22,0:22:13.74:0,14,284	0/0:13,0:13:26.99:0,27,234	1/1:4,22:26:46.35:723,46,0	1/1:3,15:18:2.22:238,2,0	1/1:4,16:20:16.45:375,16,0	1/1:4,11:15:24.06:261,24,0	1/1:4,12:16:10.47:324,10,0	0/0:22,0:22:50.02:0,50,423	0/0:15,0:15:38.97:0,39,334	1/1:3,27:30:37.12:632,37,0	1/1:1,13:14:30.07:325,30,0	0/0:21,0:21:44:0,44,371	0/0:24,0:24:59.73:0,60,506	0/0:19,0:19:41.93:0,42,357	1/1:4,12:16:27.07:293,27,0	1/1:7,16:22:42.11:459,42,0	1/1:9,20:28:36.14:449,36,0	0/0:13,0:13:29.99:0,30,260	0/0:13,0:13:32.98:0,33,284	0/0:23,0:23:56.97:0,57,491	0/0:20,0:19:51.91:0,52,464
chr10	95878208	.	TAAAAAA	T	1389.72	PASS	AB=0.580;AC=18;AF=0.321;AN=56;BaseQRankSum=0.346;DP=349;FS=0.736;HRun=17;HaplotypeScore=65.2686;InbreedingCoeff=0.5524;MQ=64.15;MQ0=17;MQRankSum=-5.031;QD=19.57;ReadPosRankSum=3.641;VQSLOD=-0.5243;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:0,0:9:9.03:0,9,231	0/0:1,0:1:0:0,0,0	0/0:61,0:13:28.91:0,29,336	0/0:63,0:19:24.42:0,24,308	1/1:5,3:10:8.73:140,9,0	0/0:12,0:12:30.10:0,30,825	0/0:0,0:2:3.01:0,3,86	0/0:32,0:30:69.22:0,69,1789	1/1:1,3:4:8.97:157,9,0	0/0:8,0:11:24.08:0,24,681	0/0:2,0:3:9.03:0,9,238	0/0:6,0:6:15.05:0,15,363	0/0:2,0:3:9.03:0,9,204	0/0:2,0:3:6.02:0,6,117	1/1:2,3:5:2.87:52,3,0	1/1:1,5:6:12.01:210,12,0	0/0:9,0:21:48.16:0,48,1313	0/0:12,0:17:33.11:0,33,790	1/1:10,5:12:14.65:229,15,0	1/1:1,3:4:2.99:52,3,0	1/1:0,1:1:3.01:52,3,0	0/0:1,0:1:3.01:0,3,80	0/0:0,0:2:3.01:0,3,64	0/0:0,0:2:3.01:0,3,86	1/1:1,5:6:9.02:157,9,0	0/1:1,10:12:57.72:369,0,58	0/1:3,5:8:83.40:145,0,83	0/0:16,0:22:66.18:0,66,1594
chr10	95878553	.	ACCC	A	5321.30	PASS	AB=0.660;AC=50;AF=0.893;AN=56;BaseQRankSum=2.410;DP=372;FS=0.000;HRun=4;HaplotypeScore=106.7156;InbreedingCoeff=0.4249;MQ=31.36;MQ0=85;MQRankSum=0.810;QD=20.71;ReadPosRankSum=1.707;VQSLOD=1.2938;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:5,8:12:13.13:209,0,13	1/1:1,2:2:6.02:91,6,0	0/0:53,0:6:14.01:0,14,158	0/0:62,0:9:6.21:0,6,64	1/1:5,4:5:12.04:175,12,0	1/1:2,0:10:26.10:144,26,0	1/1:4,0:7:14.40:78,14,0	1/1:2,20:21:60.16:888,60,0	1/1:0,6:6:18.06:273,18,0	0/1:4,0:4:10.11:24,0,10	1/1:3,0:8:17.56:106,18,0	1/1:2,0:8:23.12:130,23,0	1/1:2,0:2:5.83:33,6,0	1/1:3,0:7:17.49:102,17,0	1/1:5,9:10:30.10:441,30,0	1/1:3,10:12:27.09:409,27,0	1/1:7,0:10:20.20:111,20,0	1/1:4,0:8:23.19:125,23,0	1/1:9,8:8:21.07:320,21,0	1/1:1,4:4:12.04:182,12,0	1/1:2,1:2:3.01:38,3,0	1/1:1,0:2:2.90:16,3,0	1/1:5,0:5:11.78:75,12,0	1/1:3,0:6:11.55:63,12,0	1/1:1,4:4:12.04:182,12,0	1/1:5,12:15:33.06:475,33,0	1/1:3,9:9:24.08:365,24,0	1/1:13,2:8:24.05:268,24,0
chr10	95879053	.	AG	A	10480.38	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=18.627;DP=607;FS=1.689;HRun=1;HaplotypeScore=90.2605;InbreedingCoeff=0.9871;MQ=65.15;MQ0=1;MQRankSum=1.783;QD=36.26;ReadPosRankSum=6.804;VQSLOD=4.6119;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:75.24:972,75,0	1/1:0,8:8:21.07:264,21,0	0/0:14,0:11:30.03:0,30,364	0/0:13,0:12:7.71:0,8,292	1/1:0,33:33:96.21:1201,96,0	0/0:30,0:30:90.24:0,90,1330	0/0:9,0:9:27.09:0,27,431	0/0:35,0:35:99:0,105,1614	1/1:0,29:29:81.26:1050,81,0	0/0:32,0:32:96.30:0,96,1507	0/0:26,0:26:78.25:0,78,1214	0/0:21,0:21:63.21:0,63,998	0/0:10,0:10:30.09:0,30,453	0/0:20,0:20:60.20:0,60,951	1/1:0,32:32:90.29:1167,90,0	1/1:1,25:26:69.22:895,69,0	0/0:24,0:24:69.19:0,69,1036	0/0:28,0:28:78.09:0,78,1100	1/1:0,23:22:66.19:836,66,0	1/1:0,31:31:93.27:1179,93,0	1/1:0,11:11:30.10:389,30,0	0/0:16,0:16:48.14:0,48,719	0/0:26,0:26:78.22:0,78,1169	0/0:8,0:8:24.08:0,24,375	1/1:0,12:12:36.12:467,36,0	1/1:0,23:23:69.22:894,69,0	1/1:0,33:33:90.29:1167,90,0	0/0:6,0:6:18.06:0,18,288
chr10	95879269	.	T	TA	8823.24	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=-11.095;DP=633;FS=5.345;HRun=7;HaplotypeScore=63.5042;InbreedingCoeff=0.9281;MQ=72.27;MQ0=0;MQRankSum=-0.893;QD=27.75;ReadPosRankSum=4.369;VQSLOD=5.5607;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,39:42:99:1372,114,0	1/1:0,9:9:23.99:270,24,0	0/0:11,0:11:25.26:0,25,226	0/1:9,0:10:13.48:13,0,44	1/1:6,27:33:72.18:850,72,0	0/0:23,0:23:65.30:0,65,610	0/0:22,0:22:54.06:0,54,512	0/0:35,0:35:86.81:0,87,808	1/1:1,21:22:60.18:722,60,0	0/0:29,0:29:72.09:0,72,689	0/0:25,0:25:69.09:0,69,660	0/0:24,0:24:69.11:0,69,666	0/0:19,0:19:48.03:0,48,446	0/0:20,0:20:54.03:0,54,500	1/1:4,25:29:69.21:831,69,0	1/1:3,27:30:56.96:686,57,0	0/0:33,0:33:86.99:0,87,799	0/0:12,0:12:35.98:0,36,331	1/1:8,16:24:48.12:563,48,0	1/1:6,20:26:60.14:706,60,0	1/1:1,18:19:51.16:614,51,0	0/0:13,0:13:39.06:0,39,376	0/0:25,0:25:75.12:0,75,724	0/0:19,0:19:50.98:0,51,468	1/1:0,12:12:36.11:433,36,0	1/1:0,24:24:72.16:827,72,0	1/1:4,34:37:78.24:937,78,0	0/0:5,0:5:15.02:0,15,145
chr10	95879811	.	ACTGACAG	A	9817.09	PASS	AC=46;AF=0.920;AN=50;BaseQRankSum=-1.239;DP=243;FS=17.993;HRun=0;HaplotypeScore=80.0056;InbreedingCoeff=0.4400;MQ=41.99;MQ0=1;MQRankSum=-2.430;QD=42.68;ReadPosRankSum=2.142;VQSLOD=3.3214;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,1:2:3.01:70,3,0	1/1:0,3:3:6.02:150,6,0	0/0:2,0:1:3.01:0,3,99	0/0:8,0:3:3:0,3,66	1/1:3,15:17:36.12:955,36,0	1/1:2,8:9:18.06:468,18,0	./.	1/1:1,11:7:21.07:565,21,0	1/1:0,7:6:6.02:161,6,0	1/1:1,16:16:45.14:1142,45,0	1/1:0,8:7:15.05:392,15,0	1/1:1,13:14:21.07:564,21,0	1/1:1,13:14:21.07:564,21,0	1/1:0,9:7:6.02:151,6,0	1/1:1,6:7:15.05:403,15,0	1/1:3,7:10:15.05:393,15,0	1/1:1,9:10:18.06:454,18,0	1/1:3,3:5:6.02:161,6,0	1/1:1,8:6:15.02:292,15,0	1/1:2,12:14:27.09:726,27,0	./.	./.	1/1:0,11:11:15.05:391,15,0	1/1:0,2:2:6.02:161,6,0	1/1:1,9:9:3.01:81,3,0	1/1:3,11:13:33.11:888,33,0	1/1:2,10:8:9.03:242,9,0	1/1:0,10:8:18.06:443,18,0
chr10	95880182	.	T	TAC	807.81	PASS	AC=20;AF=0.385;AN=52;BaseQRankSum=-3.233;DP=370;FS=0.925;HRun=0;HaplotypeScore=71.3449;InbreedingCoeff=0.8083;MQ=53.11;MQ0=80;MQRankSum=4.287;QD=6.68;ReadPosRankSum=0.852;VQSLOD=3.0894;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:14,0:7:5.96:0,6,90	0/0:29,0:10:11.67:0,12,117	0/0:11,0:11:14.93:0,15,117	1/1:8,8:10:4.23:16,4,0	1/1:16,0:10:20.55:160,21,0	0/0:21,0:10:23.15:0,23,178	0/0:12,0:9:5.95:0,6,44	1/1:8,0:7:16.39:112,16,0	1/1:7,0:7:5.99:50,6,0	1/1:11,0:9:12.94:120,13,0	1/1:15,0:10:14.79:117,15,0	1/1:14,0:11:11.91:103,12,0	0/0:21,0:14:5.94:0,6,44	0/0:14,0:12:8.90:0,9,65	0/0:23,0:12:32.96:0,33,323	0/0:13,0:12:32.99:0,33,331	0/0:10,0:4:12:0,12,107	0/0:7,0:6:14.87:0,15,108	0/0:15,0:7:14.91:0,15,113	1/1:7,0:6:14.65:107,15,0	1/1:3,0:2:2.68:11,3,0	1/1:24,0:20:23.24:204,23,0	0/0:7,0:7:2.94:0,3,18	0/0:20,0:17:41.76:0,42,335	0/0:10,0:9:19.44:0,19,158	0/0:9,0:6:11.50:0,12,59
chr10	95880183	.	ACACTCTCTCTCT	A	1556.61	PASS	AB=1.000;AC=12;AF=0.222;AN=54;BaseQRankSum=3.209;DP=371;FS=15.591;HRun=0;HaplotypeScore=97.8226;InbreedingCoeff=0.1288;MQ=53.05;MQ0=79;MQRankSum=-4.722;QD=13.78;ReadPosRankSum=0.721;VQSLOD=1.1494;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:1,0:1:0:0,0,0	0/0:14,0:7:12.47:0,12,140	0/0:29,0:10:11.42:0,11,121	0/1:10,0:10:60.06:65,0,60	0/0:16,0:10:4.26:0,4,107	0/0:18,0:11:23.93:0,24,566	1/1:20,1:10:23.93:235,24,0	0/1:12,0:9:12.98:64,0,13	0/0:8,0:7:18.05:0,18,378	0/0:8,0:8:5.99:0,6,50	0/0:11,0:9:18.03:0,18,584	0/0:15,0:10:14.81:0,15,140	0/0:14,0:11:14.98:0,15,465	0/0:19,0:14:5.94:0,6,43	0/1:14,0:12:51.55:52,0,60	0/0:22,0:12:32.87:0,33,683	0/0:13,0:12:32.98:0,33,687	0/1:10,0:4:15.95:232,0,16	0/1:7,0:6:64.94:69,0,65	0/0:15,0:7:14.93:0,15,114	0/0:7,0:6:11.99:0,12,100	0/0:4,0:3:6.02:0,6,213	0/0:25,0:20:29.92:0,30,781	0/0:7,0:7:2.94:0,3,18	0/1:19,0:16:99:437,0,161	0/1:10,0:9:77.45:165,0,77	1/1:3,1:6:12.04:389,12,0
chr10	95880185	.	ACTCTCTCTCTCTCT	A	1712.60	PASS	AB=0.767;AC=18;AF=0.409;AN=44;BaseQRankSum=3.007;DP=371;FS=0.000;HRun=0;HaplotypeScore=103.2889;InbreedingCoeff=0.4977;MQ=53.02;MQ0=79;MQRankSum=-4.336;QD=14.04;ReadPosRankSum=1.534;VQSLOD=1.3117;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:0,0:1:0:0,0,0	./.	0/0:29,0:10:3.85:0,4,22	1/1:7,1:9:2.89:114,3,0	0/0:16,0:10:4.26:0,4,132	0/0:18,0:12:15.05:0,15,573	1/1:19,0:9:2.98:21,3,0	1/1:8,0:8:3.01:106,3,0	0/0:7,0:6:12.04:0,12,400	./.	0/0:12,0:9:12.04:0,12,627	0/0:17,0:10:5.98:0,6,66	0/0:14,0:11:12.04:0,12,527	./.	1/1:12,1:12:2.49:115,2,0	0/0:23,0:13:21.07:0,21,640	0/0:13,0:13:21.07:0,21,734	1/1:8,0:4:9.03:270,9,0	0/1:4,0:6:13.97:75,0,14	1/1:15,0:7:2.98:21,3,0	./.	0/0:4,0:3:6.02:0,6,233	0/0:26,0:21:21.07:0,21,859	./.	1/1:10,4:15:21.07:680,21,0	0/1:8,0:9:63.50:214,0,64	1/1:9,0:6:12.01:247,12,0
chr10	95880933	.	AAAAAG	A	515.78	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=4.754;DP=527;FS=7.278;HRun=0;HaplotypeScore=98.9614;InbreedingCoeff=0.5987;MQ=62.81;MQ0=4;MQRankSum=-2.628;QD=8.74;ReadPosRankSum=-1.049;VQSLOD=1.6621;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,20:27:33.01:558,33,0	0/0:6,0:6:18.06:0,18,436	0/0:26,0:12:6.68:0,7,506	0/0:22,0:13:27.22:0,27,545	0/0:26,0:26:78.24:0,78,1808	0/0:19,0:19:54.18:0,54,1450	0/0:12,0:12:30.09:0,30,732	0/1:32,0:30:63.66:64,0,571	0/0:6,0:6:18.06:0,18,534	0/0:27,0:27:78.24:0,78,1897	0/0:25,0:25:75.25:0,75,1853	0/0:13,0:13:39.13:0,39,1045	0/0:9,0:9:27.09:0,27,764	0/0:18,0:18:42.09:0,42,1075	0/0:15,0:15:39.13:0,39,1004	0/0:14,0:14:39.13:0,39,1013	0/0:34,0:34:90.18:0,90,2450	0/0:21,0:21:60.20:0,60,1585	0/0:19,0:19:57.18:0,57,1456	0/0:12,0:12:36.12:0,36,1067	0/0:13,0:13:36.08:0,36,781	0/0:10,0:10:27.09:0,27,664	0/0:20,0:20:60.19:0,60,1523	0/0:22,0:20:57.19:0,57,1489	0/0:18,0:18:54.16:0,54,1365	0/0:24,0:24:66.22:0,66,1796	0/0:26,0:26:78.27:0,78,2138	0/0:11,0:11:33.10:0,33,381
chr10	95881522	.	ATG	A	334.98	PASS	AB=0.770;AC=6;AF=0.107;AN=56;BaseQRankSum=4.112;DP=628;FS=9.584;HRun=0;HaplotypeScore=103.2524;InbreedingCoeff=0.5416;MQ=56.93;MQ0=24;MQRankSum=-4.691;QD=2.77;ReadPosRankSum=-2.015;VQSLOD=0.9139;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:5,21:21:21.06:52,0,21	0/0:12,0:12:29.94:0,30,593	0/0:69,0:11:28.29:0,28,411	0/1:74,1:25:11.67:12,0,913	0/0:11,0:11:25.18:0,25,450	0/0:13,1:14:1.01:0,1,573	0/0:26,0:26:60.18:0,60,1092	1/1:6,3:7:17.99:198,18,0	0/0:20,0:20:60.21:0,60,1132	0/0:17,0:17:48.16:0,48,926	0/0:7,0:7:12.04:0,12,243	0/0:16,1:17:6.37:0,6,556	0/0:10,0:10:24.08:0,24,485	0/0:16,0:16:36.12:0,36,692	0/0:19,0:19:51.63:0,52,976	0/0:11,0:11:27.08:0,27,513	0/0:39,0:39:99:0,102,1930	0/0:22,0:21:60.21:0,60,1180	0/0:21,0:21:60.20:0,60,1145	0/0:15,0:15:39.13:0,39,781	0/0:54,0:54:99:0,147,2801	0/0:10,0:9:14.99:0,15,285	0/0:12,0:12:24.08:0,24,468	0/0:38,0:38:99:0,99,1844	0/0:13,0:12:27.09:0,27,536	0/0:17,0:17:48.07:0,48,940	0/0:16,0:16:48.16:0,48,953	1/1:1,9:7:21.01:206,21,0
chr10	95881531	.	CCAT	C	313	PASS	AB=0.887;AC=6;AF=0.107;AN=56;BaseQRankSum=7.309;DP=613;FS=16.822;HRun=0;HaplotypeScore=113.4517;InbreedingCoeff=0.5606;MQ=53.79;MQ0=31;MQRankSum=-5.976;QD=4.67;ReadPosRankSum=-2.791;VQSLOD=0.9151;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:23:10.31:119,10,0	0/0:12,0:12:30.10:0,30,652	0/0:61,0:10:6.90:0,7,373	0/0:60,1:17:19.96:0,20,692	0/0:13,0:11:27:0,27,653	0/0:15,0:14:9.28:0,9,536	0/0:30,0:30:44.87:0,45,1486	0/1:7,2:7:30.58:31,0,134	0/0:17,0:17:51.17:0,51,1218	0/0:17,0:16:45.14:0,45,1014	0/0:8,0:8:15.02:0,15,316	0/1:15,1:16:9.92:10,0,639	0/0:10,0:10:24.08:0,24,535	0/0:16,0:16:36.11:0,36,806	0/0:18,0:18:51.16:0,51,1174	0/0:12,0:12:30.10:0,30,719	0/0:36,0:36:98.88:0,99,2206	0/0:23,0:23:56.84:0,57,1328	0/0:19,0:16:45.15:0,45,1075	0/0:14,0:13:33.09:0,33,751	0/0:59,0:58:99:0,156,3563	0/0:8,0:7:8.99:0,9,222	0/0:12,0:12:24.03:0,24,480	0/0:37,0:37:85.68:0,86,2131	0/0:13,0:12:27.18:0,27,491	0/0:19,0:18:51.08:0,51,1242	0/0:16,0:16:48.15:0,48,1089	1/1:3,5:9:21.04:282,21,0
chr10	95881539	.	AC	A	394.73	PASS	AB=0.667;AC=5;AF=0.089;AN=56;BaseQRankSum=5.516;DP=603;FS=2.970;HRun=2;HaplotypeScore=98.6991;InbreedingCoeff=0.6307;MQ=52.22;MQ0=35;MQRankSum=-6.260;QD=6.47;ReadPosRankSum=-3.661;VQSLOD=-0.4676;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,15:24:3.39:66,3,0	0/0:9,0:9:21.02:0,21,254	0/0:51,0:8:12.83:0,13,168	0/0:52,0:13:23.76:0,24,239	0/0:14,0:12:29.93:0,30,402	0/0:12,0:11:16.97:0,17,158	0/0:28,1:29:18.19:0,18,590	0/1:10,10:15:51.74:281,0,52	0/0:19,1:20:54.73:0,55,799	0/0:19,0:18:46.02:0,46,539	0/0:8,0:8:14.84:0,15,124	0/0:14,0:16:34.15:0,34,288	0/0:10,0:10:17.88:0,18,184	0/0:16,0:16:32.94:0,33,401	0/0:16,0:16:41.50:0,42,578	0/0:13,0:13:32.59:0,33,419	0/0:34,0:34:81.85:0,82,1144	0/0:24,0:23:50.83:0,51,602	0/0:19,0:15:28.40:0,28,330	0/0:14,0:12:30.06:0,30,405	0/0:68,0:66:99:0,164,2185	0/0:8,0:7:8.96:0,9,100	0/0:10,0:10:14.98:0,15,162	0/0:36,0:37:86.12:0,86,810	0/0:8,0:7:11.36:0,11,109	0/0:18,0:17:43.82:0,44,527	0/0:17,0:17:47.96:0,48,528	1/1:4,7:8:17.86:164,18,0
chr10	95881540	.	C	CCACA	2779.93	PASS	AB=0.720;AC=21;AF=0.404;AN=52;BaseQRankSum=-1.688;DP=616;FS=3.545;HRun=0;HaplotypeScore=121.3065;InbreedingCoeff=0.5999;MQ=52.60;MQ0=34;MQRankSum=-1.901;QD=11.83;ReadPosRankSum=-1.736;VQSLOD=2.7439;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:25:0:0,0,0	0/0:9,0:9:9.02:0,9,120	./.	./.	0/0:13,0:12:6.02:0,6,204	1/1:8,3:13:6.02:138,6,0	0/1:18,10:32:99:219,0,167	1/1:22,0:21:19.30:255,19,0	0/0:20,0:21:38.92:0,39,642	1/1:15,4:20:18.06:358,18,0	1/1:3,5:10:6.02:140,6,0	1/1:9,4:18:20.29:334,20,0	1/1:7,2:10:3.01:71,3,0	0/1:10,6:16:9.96:133,0,10	0/0:14,0:16:33.09:0,33,480	0/0:10,0:13:18.04:0,18,239	0/0:29,0:34:49.16:0,49,626	0/0:16,0:22:44.31:0,44,541	0/0:14,0:15:13.96:0,14,147	0/0:14,0:12:14.25:0,14,169	0/0:65,0:66:75.74:0,76,1042	1/1:3,5:7:2.18:70,2,0	1/1:4,7:11:6.02:143,6,0	1/1:19,15:39:48.06:1096,48,0	0/0:6,0:7:2.67:0,3,28	0/0:13,0:17:2.89:0,3,108	0/0:12,0:17:36.09:0,36,463	0/0:9,0:8:2.98:0,3,22
chr10	95881563	.	CA	C	544.46	PASS	AB=0.914;AC=5;AF=0.089;AN=56;BaseQRankSum=7.359;DP=626;FS=0.721;HRun=1;HaplotypeScore=100.0067;InbreedingCoeff=0.6627;MQ=52.63;MQ0=20;MQRankSum=-4.979;QD=7.78;ReadPosRankSum=-3.199;VQSLOD=-0.2852;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,11:28:20.71:179,21,0	0/0:5,0:5:12.04:0,12,182	0/0:29,0:14:39.58:0,40,480	0/0:31,0:11:33.10:0,33,402	0/0:15,0:14:29.93:0,30,405	0/0:15,0:14:23.65:0,24,268	0/0:35,0:35:72.20:0,72,922	0/1:29,3:29:99:404,0,271	0/0:25,0:25:71.88:0,72,973	0/0:21,0:20:56.74:0,57,704	0/0:10,0:10:9.02:0,9,97	0/0:16,0:16:33.08:0,33,369	0/0:10,0:10:14.83:0,15,180	0/0:15,0:15:30.08:0,30,369	0/0:19,0:19:49.96:0,50,699	0/0:17,0:17:44.18:0,44,597	0/0:36,0:36:93.72:0,94,1281	0/0:30,0:28:76.67:0,77,1002	0/0:25,0:22:62.55:0,63,775	0/0:13,0:11:27.09:0,27,391	0/0:77,0:75:99:0,185,2487	0/0:15,1:15:18:0,18,202	0/0:15,0:15:24.06:0,24,293	0/0:32,0:32:72.04:0,72,787	0/0:7,0:7:7.82:0,8,68	0/0:25,0:25:66.76:0,67,813	0/0:17,0:17:43.34:0,43,544	1/1:5,0:4:6.02:82,6,0
chr10	95881567	.	C	CCAT	1344.66	PASS	AB=0.706;AC=5;AF=0.089;AN=56;BaseQRankSum=7.048;DP=629;FS=1.381;HRun=0;HaplotypeScore=123.9500;InbreedingCoeff=0.6258;MQ=58.71;MQ0=15;MQRankSum=-5.331;QD=17.69;ReadPosRankSum=-2.675;VQSLOD=2.7407;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,13:31:32.60:385,33,0	0/0:6,0:6:12.04:0,12,222	0/0:28,0:17:43.96:0,44,737	0/0:29,0:15:36.51:0,37,560	0/0:15,0:15:27.50:0,27,461	0/0:17,0:16:18.94:0,19,262	0/0:34,0:34:61.87:0,62,981	0/1:21,15:33:99:967,0,244	0/0:26,0:26:75.24:0,75,1287	0/0:20,0:19:35.04:0,35,594	0/0:10,0:10:1.26:0,1,52	0/0:17,0:17:16.51:0,17,256	0/0:10,0:10:12.51:0,13,195	0/0:16,0:16:22.07:0,22,450	0/0:18,0:18:51.15:0,51,887	0/0:19,0:19:51.12:0,51,807	0/0:36,0:36:96.26:0,96,1687	0/0:32,0:30:90.25:0,90,1450	0/0:25,0:23:69.22:0,69,1124	0/0:12,0:10:27.08:0,27,455	0/0:73,0:72:99:0,177,3109	0/0:15,0:14:10.44:0,10,166	0/0:15,0:15:16.96:0,17,317	0/0:31,0:31:31.89:0,32,386	0/0:7,0:7:9.01:0,9,109	0/0:26,0:26:69.18:0,69,1140	0/0:16,0:16:48.13:0,48,731	1/1:2,3:4:8.99:115,9,0
chr10	95881624	.	ACAAAAGGTCTCTCTTTTTT	A	3208.31	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.103;DP=538;FS=8.792;HRun=0;HaplotypeScore=269.9732;InbreedingCoeff=0.9492;MQ=89.77;MQ0=0;MQRankSum=-6.013;QD=68.26;ReadPosRankSum=-1.263;VQSLOD=1.7061;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,15:23:48.01:2126,48,0	0/0:4,0:4:12.04:0,12,1097	0/0:24,0:24:62.36:0,62,3057	0/0:22,0:22:57.13:0,57,2163	0/0:13,0:13:36.08:0,36,2526	0/0:16,0:16:42.09:0,42,2908	0/0:14,0:14:36.12:0,36,3070	1/1:1,20:21:59.72:896,60,0	0/0:20,0:20:57.17:0,57,4311	0/0:13,0:13:39.13:0,39,3123	0/0:9,0:9:27.08:0,27,2065	0/0:26,0:26:72.25:0,72,6362	0/0:11,0:11:33.10:0,33,2680	0/0:15,0:15:42.14:0,42,3314	0/0:23,0:23:69.17:0,69,5437	0/0:23,0:23:63.22:0,63,5127	0/0:34,0:34:96.31:0,96,8036	0/0:41,0:38:99:0,120,9684	0/0:34,0:34:96.32:0,96,6695	0/0:13,0:13:36.12:0,36,3284	0/0:35,0:35:96.30:0,96,7207	0/0:11,0:11:33.11:0,33,2313	0/0:15,0:15:39.12:0,39,2920	0/0:20,0:20:57.11:0,57,4613	0/0:8,0:8:24.08:0,24,2200	0/0:26,0:26:75.26:0,75,6389	0/0:21,0:21:60.20:0,60,4838	1/1:1,2:3:6.02:321,6,0
chr10	95881912	.	A	AATGCTTTAAATTCCTCGGAAGCGGAGG	141957.10	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=5.852;DP=805;FS=3.732;HRun=0;HaplotypeScore=509.6197;InbreedingCoeff=0.9999;MQ=80.47;MQ0=0;MQRankSum=-17.196;QD=214.44;ReadPosRankSum=2.239;VQSLOD=4.4906;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.33:0,96,5442	1/1:11,3:14:42.14:3927,42,0	0/0:35,0:35:85.53:0,86,3304	0/0:32,0:32:77.44:0,77,3768	1/1:28,3:34:81.28:6109,81,0	1/1:16,4:21:57.20:5388,57,0	1/1:30,0:30:84.25:5925,84,0	1/1:37,0:37:99:5400,99,0	1/1:37,3:40:99:9831,111,0	1/1:34,0:34:99:7954,99,0	1/1:26,1:27:66.23:5203,66,0	1/1:36,3:42:99:9695,108,0	1/1:30,0:30:87.30:7724,87,0	1/1:29,7:37:99:10439,105,0	1/1:37,7:47:99:11091,126,0	1/1:21,4:25:72.25:6088,72,0	0/0:24,0:24:69.24:0,69,4399	0/0:16,0:16:45.15:0,45,2869	1/1:22,1:25:60.15:3461,60,0	1/1:19,2:22:63.17:5428,63,0	1/1:28,0:28:66.18:3969,66,0	1/1:17,3:23:60.21:4945,60,0	1/1:23,2:28:63.18:5580,63,0	1/1:22,2:28:54.19:3648,54,0	1/1:14,1:16:42.10:2759,42,0	1/1:28,3:32:84.29:6967,84,0	1/1:24,2:30:84.24:6847,84,0	1/1:8,3:12:33.11:3579,33,0
chr10	95882524	.	T	TAAAA	2070.23	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=4.299;DP=261;FS=23.850;HRun=9;HaplotypeScore=94.9664;InbreedingCoeff=0.7956;MQ=62.59;MQ0=0;MQRankSum=-8.316;QD=26.89;ReadPosRankSum=-2.220;VQSLOD=-0.1844;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:21.05:0,21,307	1/1:2,1:3:9.03:150,9,0	0/0:10,0:8:4.74:0,5,175	0/1:12,0:9:8.77:9,0,197	1/1:7,3:10:20.82:341,21,0	0/0:16,0:16:45.15:0,45,650	0/0:7,0:7:15.03:0,15,219	0/0:17,0:17:45.13:0,45,652	1/1:0,2:2:3.01:72,3,0	0/0:20,0:20:42.06:0,42,602	0/0:17,0:17:36.07:0,36,525	0/0:6,0:6:18.06:0,18,263	0/0:4,0:5:15.03:0,15,199	0/0:6,0:6:15.03:0,15,199	1/1:2,0:2:3.01:44,3,0	1/1:6,1:7:18.03:225,18,0	0/0:18,0:18:44.96:0,45,609	0/0:17,0:18:49.38:0,49,703	1/1:4,0:3:6.02:86,6,0	1/1:3,4:7:21.01:374,21,0	1/1:5,0:5:6.01:91,6,0	0/0:5,0:6:9:0,9,132	0/0:15,0:15:26.77:0,27,395	0/0:7,0:7:8.99:0,9,132	1/1:8,1:10:23.71:287,24,0	1/1:4,3:6:14.91:255,15,0	1/1:6,2:8:24.01:343,24,0	0/0:7,0:7:17.77:0,18,263
chr10	95882571	.	TTTTTTG	T	1594.29	PASS	AB=0.947;AC=29;AF=0.518;AN=56;BaseQRankSum=3.577;DP=301;FS=0.000;HRun=0;HaplotypeScore=69.3493;InbreedingCoeff=-0.1632;MQ=73.02;MQ0=10;MQRankSum=-1.486;QD=8.18;ReadPosRankSum=3.980;VQSLOD=1.2910;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:21:37.48:37,0,145	1/1:0,3:3:2.92:59,3,0	0/0:37,0:12:19.38:0,19,330	0/0:23,0:13:31.10:0,31,315	0/1:3,4:7:24.14:71,0,24	0/1:20,0:20:39.36:50,0,39	1/1:4,0:4:7.80:42,8,0	0/1:7,0:7:22.17:80,0,22	1/1:1,7:8:5.97:66,6,0	0/1:10,0:10:12.14:82,0,12	0/1:13,0:13:9.78:10,0,94	0/1:6,0:6:3.71:4,0,57	0/1:8,0:8:44.26:44,0,44	0/1:6,0:6:24.42:24,0,67	0/0:0,3:3:0:0,0,0	1/1:5,2:7:3.89:70,4,0	0/0:24,0:24:66.15:0,66,1340	0/0:18,0:18:45.13:0,45,976	0/1:5,0:4:29.26:65,0,29	0/1:2,7:9:29.67:230,0,30	0/1:10,0:10:81.79:109,0,82	0/1:4,0:4:10.97:37,0,11	0/1:15,0:14:41.18:41,0,76	0/0:1,0:1:2.98:0,3,22	1/1:3,1:4:8.20:114,8,0	1/1:2,8:10:23.74:264,24,0	1/1:6,1:8:17.59:211,18,0	0/1:9,0:9:49.56:50,0,70
chr10	95882573	.	TTTTG	T	1962.62	PASS	AB=1.000;AC=36;AF=0.667;AN=54;BaseQRankSum=2.523;DP=282;FS=0.000;HRun=0;HaplotypeScore=59.3556;InbreedingCoeff=0.3631;MQ=78.94;MQ0=9;MQRankSum=-2.329;QD=13.00;ReadPosRankSum=3.701;VQSLOD=2.3833;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:9.13:0,9,187	1/1:3,0:3:2.97:37,3,0	0/0:36,0:13:22.31:0,22,278	0/0:25,0:15:31.78:0,32,277	0/1:7,0:7:13.60:80,0,14	1/1:1,17:18:18.06:267,18,0	1/1:3,0:3:9.01:116,9,0	0/1:9,0:9:27.94:28,0,67	1/1:8,0:8:5.95:44,6,0	1/1:9,0:9:17.73:154,18,0	1/1:9,2:11:25.12:201,25,0	1/1:3,0:3:4.13:33,4,0	1/1:4,1:5:10.79:100,11,0	1/1:5,0:5:8.58:58,9,0	0/0:3,0:3:0:0,0,0	1/1:6,0:6:5.11:49,5,0	0/0:25,0:25:61.93:0,62,806	0/0:18,0:18:39.08:0,39,579	0/1:3,0:3:16.65:41,0,17	0/1:9,0:9:12.68:138,0,13	0/1:9,0:9:36.50:90,0,36	1/1:0,4:4:8.94:85,9,0	1/1:3,7:9:14.46:177,14,0	./.	1/1:2,0:2:6.02:73,6,0	1/1:10,0:10:23.86:209,24,0	1/1:7,0:7:17.85:156,18,0	0/1:10,0:10:3.94:4,0,93
chr10	95882574	.	TTTG	T	1742.84	PASS	AB=1.000;AC=37;AF=0.685;AN=54;BaseQRankSum=2.418;DP=273;FS=0.585;HRun=0;HaplotypeScore=52.8734;InbreedingCoeff=0.4967;MQ=81.70;MQ0=5;MQRankSum=-2.659;QD=12.54;ReadPosRankSum=3.329;VQSLOD=2.6608;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:27.12:0,27,223	1/1:3,0:3:3.01:31,3,0	0/0:32,0:14:18.40:0,18,251	0/0:23,0:15:27.67:0,28,217	0/1:7,0:7:1.66:74,0,2	1/1:18,0:18:18.04:190,18,0	1/1:2,1:3:9.01:87,9,0	0/1:9,0:9:8.84:9,0,69	1/1:8,0:8:5.92:39,6,0	1/1:2,7:9:17.88:162,18,0	1/1:9,2:11:25.64:203,26,0	1/1:3,0:3:5.02:35,5,0	1/1:5,0:5:12.33:89,12,0	1/1:4,0:4:8.86:58,9,0	./.	1/1:4,0:4:5.26:45,5,0	0/0:24,0:24:51.74:0,52,586	0/0:17,0:17:36.85:0,37,418	0/1:3,0:3:7.37:41,0,7	0/1:9,0:9:3.13:112,0,3	0/1:8,0:8:20.34:68,0,20	1/1:4,0:4:8.94:71,9,0	1/1:8,1:8:14.82:135,15,0	1/1:1,0:1:3:26,3,0	1/1:2,0:2:6.01:61,6,0	1/1:10,0:10:23.85:192,24,0	1/1:9,0:9:23.88:197,24,0	0/0:10,0:10:12.57:0,13,111
chr10	95883367	.	AGGCTC	A	7690.22	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=12.412;DP=490;FS=2.380;HRun=0;HaplotypeScore=101.1387;InbreedingCoeff=0.9951;MQ=78.51;MQ0=0;MQRankSum=-6.993;QD=46.89;ReadPosRankSum=3.800;VQSLOD=4.9314;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:51.16:0,51,1427	0/0:9,0:9:27.09:0,27,808	0/0:12,0:12:30.10:0,30,771	0/0:16,0:16:36.61:0,37,1048	0/0:10,0:10:21.07:0,21,656	1/1:2,14:16:39.13:831,39,0	1/1:1,14:15:36.12:767,36,0	0/0:25,0:25:66.23:0,66,2035	0/0:20,0:20:60.18:0,60,1701	1/1:2,8:10:21.07:448,21,0	1/1:4,10:14:18.52:384,19,0	1/1:1,24:25:63.22:1342,63,0	1/1:0,18:18:48.16:1023,48,0	1/1:0,17:17:47.85:979,48,0	0/0:25,0:25:69.24:0,69,1996	0/0:15,0:15:42.14:0,42,1286	0/0:28,0:28:81.28:0,81,2399	0/0:17,0:16:48.14:0,48,1432	0/0:18,0:18:48.15:0,48,1402	0/0:10,0:10:27.09:0,27,736	0/0:62,0:62:99:0,172,5120	1/1:1,13:14:24.08:511,24,0	1/1:2,8:10:18.06:383,18,0	1/1:1,24:25:48.16:1023,48,0	0/0:11,0:11:33.11:0,33,1008	0/0:8,0:8:24.08:0,24,692	0/0:11,0:11:33.11:0,33,1032	0/0:8,0:8:24.08:0,24,750
chr10	95883808	.	T	TAC	897.32	PASS	AB=0.923;AC=7;AF=0.125;AN=56;BaseQRankSum=7.622;DP=248;FS=10.246;HRun=0;HaplotypeScore=54.7287;InbreedingCoeff=0.6418;MQ=69.65;MQ0=7;MQRankSum=-7.899;QD=18.69;ReadPosRankSum=-1.609;VQSLOD=2.4770;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,2:6:17.92:178,18,0	0/0:2,0:2:6.02:0,6,95	0/0:20,0:8:14.88:0,15,162	0/1:11,0:6:2.12:2,0,90	0/0:5,0:5:14.99:0,15,174	0/0:11,0:10:17.90:0,18,132	0/0:4,0:4:2.99:0,3,23	1/1:10,6:16:46.36:455,46,0	0/0:3,0:3:9.03:0,9,133	0/0:4,0:4:11.99:0,12,134	0/0:9,0:9:21.02:0,21,274	0/0:8,0:8:8.70:0,9,69	0/0:5,0:5:15.04:0,15,208	0/0:5,0:5:15.05:0,15,220	0/0:9,0:9:27.09:0,27,430	0/0:6,0:6:15.05:0,15,206	0/0:34,0:34:99:0,102,1649	0/0:25,0:25:75.24:0,75,1189	0/0:12,0:10:27.09:0,27,415	0/0:1,0:1:3.01:0,3,49	0/0:6,0:6:18.06:0,18,291	0/0:2,0:2:3.01:0,3,49	0/0:5,0:5:15.05:0,15,227	0/0:2,0:2:6.02:0,6,97	0/0:11,0:10:24.08:0,24,349	0/0:5,0:5:15.02:0,15,200	0/0:6,0:6:18.06:0,18,293	1/1:6,6:13:38.72:402,39,0
chr10	95883852	.	A	AT	1328.01	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=-2.216;DP=296;FS=14.665;HRun=4;HaplotypeScore=38.6057;InbreedingCoeff=0.6637;MQ=51.41;MQ0=8;MQRankSum=-5.387;QD=19.25;ReadPosRankSum=0.176;VQSLOD=1.8260;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:14:27.09:360,27,0	0/0:3,0:3:6.02:0,6,68	0/0:10,0:1:3.01:0,3,30	./.	0/0:7,0:7:12.82:0,13,156	0/0:9,0:9:24.07:0,24,264	0/0:9,0:9:18.05:0,18,199	1/1:8,17:24:48.59:620,49,0	0/1:13,0:13:3.81:4,0,321	0/0:8,0:8:21.06:0,21,237	0/0:16,0:15:36.10:0,36,405	0/0:3,0:3:9.02:0,9,100	0/0:4,0:4:12.02:0,12,125	0/0:3,0:3:6.02:0,6,68	0/0:10,0:10:24.07:0,24,271	0/0:9,0:9:8.05:0,8,142	0/0:35,0:35:96.27:0,96,1087	0/0:26,0:26:72.16:0,72,802	0/0:10,0:10:27.06:0,27,294	0/0:8,0:8:24.07:0,24,267	0/0:5,0:5:9.03:0,9,102	0/0:6,0:6:15.01:0,15,151	0/0:3,0:3:6.02:0,6,68	0/0:4,0:4:12.03:0,12,136	0/0:14,0:13:25.18:0,25,264	0/0:5,0:5:15.04:0,15,169	0/0:3,0:3:9.03:0,9,102	1/1:3,14:16:36.12:485,36,0
chr10	95884241	.	C	CTT	755.36	PASS	AB=0.744;AC=3;AF=0.054;AN=56;BaseQRankSum=6.530;DP=426;FS=9.086;HRun=3;HaplotypeScore=60.1463;InbreedingCoeff=0.0128;MQ=62.45;MQ0=6;MQRankSum=-5.279;QD=14.81;ReadPosRankSum=-2.208;VQSLOD=-0.6100;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:7,7:11:89.47:95,0,89	0/0:12,0:12:33.11:0,33,462	0/0:13,0:10:24.06:0,24,309	0/0:7,0:6:18.06:0,18,242	0/0:20,0:20:54.12:0,54,732	0/0:15,0:15:30.10:0,30,419	0/0:8,0:8:18:0,18,220	0/1:12,14:22:99:471,0,113	0/0:14,0:14:33.11:0,33,459	0/0:19,0:19:57.14:0,57,753	0/0:19,0:19:47.89:0,48,641	0/0:9,0:8:21.07:0,21,293	0/0:15,0:15:36.11:0,36,485	0/0:14,0:14:36.12:0,36,491	0/0:11,0:9:27.09:0,27,374	0/0:13,0:13:39.11:0,39,521	0/0:25,0:25:60.18:0,60,810	0/0:25,0:24:66.20:0,66,897	0/0:17,0:17:51.17:0,51,702	0/0:20,0:20:60.19:0,60,815	0/0:9,0:9:24.08:0,24,336	0/0:10,0:10:27.06:0,27,343	0/0:13,0:13:39.13:0,39,536	0/0:11,0:11:30.10:0,30,418	0/0:21,0:21:57.19:0,57,790	0/0:16,0:16:42.13:0,42,573	0/0:19,0:19:51.08:0,51,687	0/1:10,1:11:9.15:290,0,9
chr10	95884243	.	TTC	T	534.90	PASS	AB=0.889;AC=3;AF=0.054;AN=56;BaseQRankSum=6.635;DP=423;FS=9.731;HRun=0;HaplotypeScore=53.4915;InbreedingCoeff=-0.0566;MQ=62.27;MQ0=6;MQRankSum=-5.418;QD=10.70;ReadPosRankSum=-2.692;VQSLOD=1.5165;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:13,1:11:18.43:18,0,243	0/0:12,0:12:33.11:0,33,619	0/0:13,0:10:24.07:0,24,404	0/0:8,0:6:18.06:0,18,319	0/0:20,0:20:57.18:0,57,1031	0/0:15,0:15:39.13:0,39,689	0/0:8,0:8:18.06:0,18,319	0/1:25,0:21:99:391,0,249	0/0:14,0:14:33.11:0,33,623	0/0:20,0:20:57.19:0,57,1077	0/0:17,0:17:47.90:0,48,863	0/0:9,0:8:24.08:0,24,420	0/0:14,0:14:36.11:0,36,646	0/0:14,0:14:39.13:0,39,675	0/0:11,0:9:27.09:0,27,482	0/0:13,0:13:39.12:0,39,706	0/0:25,0:25:63.20:0,63,1117	0/0:25,0:24:66.21:0,66,1194	0/0:17,0:17:51.17:0,51,941	0/0:20,0:20:60.19:0,60,1084	0/0:8,0:8:24.08:0,24,456	0/0:10,0:10:27.07:0,27,441	0/0:13,0:13:39.13:0,39,720	0/0:11,0:11:30.10:0,30,561	0/0:21,0:21:57.19:0,57,1043	0/0:15,0:15:45.15:0,45,830	0/0:20,0:20:54.18:0,54,986	0/1:7,4:11:29.64:225,0,30
chr10	95884494	.	TCTGCTGTCCACCTGGGCA	T	1217.80	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.843;DP=508;FS=10.342;HRun=0;HaplotypeScore=232.3222;InbreedingCoeff=0.9205;MQ=84.77;MQ0=0;MQRankSum=-4.227;QD=29.00;ReadPosRankSum=-2.168;VQSLOD=0.8244;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:18:12.04:520,12,0	0/0:9,0:9:27.08:0,27,1938	0/0:11,0:11:33.08:0,33,1448	0/0:24,0:24:60.50:0,60,3764	0/0:20,0:20:57.18:0,57,4357	0/0:20,0:20:57.13:0,57,3910	0/0:28,0:28:78.24:0,78,5886	1/1:5,12:17:35.92:673,36,0	0/0:14,0:14:42.13:0,42,2797	0/0:15,0:15:39.13:0,39,3293	0/0:9,0:9:27.08:0,27,1822	0/0:16,0:16:41.79:0,42,3226	0/0:18,0:18:54.10:0,54,3913	0/0:17,0:17:42.13:0,42,3016	0/0:21,0:21:54.12:0,54,4282	0/0:16,0:16:45.15:0,45,3585	0/0:34,0:34:93.18:0,93,6438	0/0:18,0:18:42.14:0,42,3632	0/0:11,0:11:33.11:0,33,1915	0/0:23,0:23:69.23:0,69,5058	0/0:40,0:40:99:0,111,8372	0/0:11,0:11:27.09:0,27,2248	0/0:17,0:17:48.07:0,48,3228	0/0:20,0:20:54.19:0,54,4421	0/0:9,0:9:27.09:0,27,1996	0/0:20,0:20:54.18:0,54,4209	0/0:25,0:25:72.25:0,72,5862	1/1:4,2:6:3.01:152,3,0
chr10	95884630	.	AC	A	720.45	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.311;DP=510;FS=0.689;HRun=8;HaplotypeScore=64.3925;InbreedingCoeff=0.9165;MQ=78.70;MQ0=0;MQRankSum=-6.605;QD=13.85;ReadPosRankSum=-2.586;VQSLOD=2.9524;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,17:23:41.86:366,42,0	0/0:4,0:4:12.04:0,12,145	0/0:17,0:16:18.43:0,18,174	0/0:23,2:21:26.51:0,27,261	0/0:11,0:11:26.89:0,27,286	0/0:15,0:15:39.10:0,39,454	0/0:29,0:29:69.13:0,69,792	1/1:15,10:25:48.05:458,48,0	0/0:9,0:9:27.02:0,27,307	0/0:23,0:23:66.18:0,66,783	0/0:19,0:19:51.15:0,51,603	0/0:18,0:18:45.11:0,45,521	0/0:23,0:23:69.20:0,69,821	0/0:20,0:20:57.13:0,57,672	0/0:20,0:20:51.16:0,51,612	0/0:15,0:15:36.11:0,36,431	0/0:26,0:26:75.22:0,75,895	0/0:27,0:27:81.12:0,81,943	0/0:12,0:12:30.08:0,30,353	0/0:12,0:12:36.09:0,36,421	0/0:20,1:21:28.20:0,28,622	0/0:24,0:24:60.16:0,60,699	0/0:17,0:17:48.15:0,48,579	0/0:19,0:19:45.12:0,45,529	0/0:9,0:9:18.04:0,18,217	0/0:16,0:16:45.13:0,45,529	0/0:26,0:26:66.15:0,66,751	1/1:3,0:3:3:28,3,0
chr10	95884648	.	TC	T	1612.29	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=8.634;DP=514;FS=0.000;HRun=1;HaplotypeScore=61.5576;InbreedingCoeff=0.8246;MQ=74.78;MQ0=0;MQRankSum=-5.553;QD=24.80;ReadPosRankSum=-3.733;VQSLOD=2.4617;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:66.16:882,66,0	0/0:4,0:4:12.01:0,12,165	0/1:18,0:15:12.47:12,0,440	0/0:26,0:23:57.73:0,58,797	0/0:12,0:12:30.10:0,30,476	0/0:17,0:17:51.17:0,51,815	0/0:25,0:25:75.25:0,75,1185	1/1:2,15:17:51.16:695,51,0	0/0:14,0:14:42.14:0,42,669	0/0:25,0:25:69.24:0,69,1103	0/0:20,0:20:60.16:0,60,926	0/0:13,0:13:39.12:0,39,600	0/0:20,0:20:60.20:0,60,935	0/0:21,0:21:60.19:0,60,933	0/0:21,0:21:60.20:0,60,958	0/0:12,0:12:36.12:0,36,561	0/0:33,0:33:99:0,99,1558	0/0:26,0:26:73.69:0,74,1108	0/0:10,0:10:30.10:0,30,478	0/0:13,0:13:39.13:0,39,622	0/0:27,0:27:81.26:0,81,1270	0/0:28,0:28:78.24:0,78,1187	0/0:18,0:18:54.10:0,54,816	0/0:17,0:17:48.15:0,48,742	0/0:11,0:11:30.10:0,30,478	0/0:15,0:15:45.14:0,45,677	0/0:21,0:21:63.21:0,63,1004	1/1:0,4:4:12.04:168,12,0
chr10	95884872	.	T	TCCCCA	3504.01	PASS	AB=0.801;AC=12;AF=0.214;AN=56;BaseQRankSum=12.566;DP=593;FS=70.274;HRun=0;HaplotypeScore=136.1714;InbreedingCoeff=-0.2727;MQ=76.65;MQ0=0;MQRankSum=-11.162;QD=17.09;ReadPosRankSum=1.369;VQSLOD=0.3600;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,147,3195	0/1:5,2:7:99:128,0,265	0/0:18,0:18:51.17:0,51,1113	0/0:16,0:17:48.08:0,48,1042	0/1:18,9:27:99:493,0,839	0/0:21,0:21:63.22:0,63,1468	0/0:24,0:24:69.17:0,69,1425	0/0:19,0:19:55.05:0,55,1120	0/1:12,4:16:99:263,0,650	0/0:21,0:21:63.22:0,63,1465	0/0:16,0:16:48.16:0,48,1115	0/0:26,0:26:78.24:0,78,1719	0/0:27,0:27:81.28:0,81,1861	0/0:12,0:12:33.11:0,33,769	0/1:11,6:17:99:364,0,652	0/1:8,4:12:99:282,0,456	0/0:30,0:30:90.29:0,90,2023	0/0:37,0:37:99:0,111,2412	0/1:16,2:18:99:136,0,812	0/1:13,8:21:99:513,0,710	0/1:25,2:27:28.37:28,0,1574	0/0:17,0:17:51.18:0,51,1186	0/0:23,0:23:69.22:0,69,1560	0/0:28,0:28:81.28:0,81,1863	0/1:8,5:13:99:322,0,452	0/1:17,5:22:99:351,0,986	0/1:11,8:19:99:573,0,442	0/1:6,0:6:51.75:52,0,168
chr10	95885584	.	GACACACACACAC	G	1496.83	PASS	AB=0.821;AC=19;AF=0.413;AN=46;BaseQRankSum=6.322;DP=489;FS=19.233;HRun=0;HaplotypeScore=155.1364;InbreedingCoeff=0.4540;MQ=51.89;MQ0=27;MQRankSum=-4.806;QD=7.52;ReadPosRankSum=-1.100;VQSLOD=1.5441;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:17.78:0,18,868	./.	./.	./.	0/0:11,0:10:6.02:0,6,84	./.	1/1:11,0:12:3.01:81,3,0	0/0:21,0:21:9.03:0,9,204	0/1:9,0:12:1.40:1,0,12	0/1:19,6:25:99:390,0,113	./.	1/1:16,8:22:6.01:128,6,0	1/1:9,2:11:6.02:204,6,0	1/1:18,3:21:6.02:186,6,0	0/0:16,0:16:5.36:0,5,32	0/0:16,0:20:3.40:0,3,126	0/0:27,0:26:27.05:0,27,1210	0/0:21,0:21:27.56:0,28,1309	0/1:5,1:5:35.82:36,0,60	0/0:13,0:12:8.99:0,9,86	0/0:35,0:34:6.02:0,6,131	1/1:11,2:13:9.03:264,9,0	1/1:8,1:8:3.01:102,3,0	1/1:39,11:49:5.80:204,6,0	0/0:9,0:10:8.95:0,9,107	0/0:7,0:7:3.47:0,3,28	1/1:9,0:14:6.49:53,6,0	0/0:6,0:7:9.03:0,9,462
chr10	95887708	.	TA	T	6654.89	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-14.704;DP=432;FS=0.372;HRun=1;HaplotypeScore=60.5983;InbreedingCoeff=0.3917;MQ=62.69;MQ0=2;MQRankSum=1.476;QD=21.96;ReadPosRankSum=-4.143;VQSLOD=3.6738;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:52.52:0,53,169	1/1:0,5:5:15.05:209,15,0	0/0:12,0:6:11.94:0,12,114	0/0:10,1:6:10.21:0,10,92	1/1:0,20:20:60.12:789,60,0	0/0:23,0:23:23.78:0,24,126	0/0:6,0:6:11.12:0,11,32	0/1:28,0:25:36.08:36,0,301	1/1:1,13:14:33.11:461,33,0	0/1:21,0:21:21.75:22,0,51	0/0:10,0:10:16.72:0,17,48	0/1:12,0:12:2.82:3,0,36	0/1:12,0:12:15.32:58,0,15	0/1:6,0:6:13.27:13,0,15	1/1:0,11:11:30.10:419,30,0	1/1:0,13:13:27.09:377,27,0	0/0:24,0:24:26.62:0,27,120	0/1:21,0:21:5.86:6,0,81	1/1:2,10:12:29.86:385,30,0	1/1:0,23:23:68.68:842,69,0	1/1:0,12:12:33.11:460,33,0	0/1:6,0:6:8.74:26,0,9	0/1:6,0:6:13.60:14,0,18	0/1:8,0:8:18.54:27,0,19	1/1:0,30:30:72.24:1004,72,0	1/1:0,18:18:54.15:707,54,0	1/1:0,25:25:57.16:796,57,0	0/0:14,0:14:25.18:0,25,121
chr10	95888193	.	CTT	C	2354.74	PASS	AB=0.746;AC=20;AF=0.357;AN=56;BaseQRankSum=-5.795;DP=569;FS=13.700;HRun=15;HaplotypeScore=86.2019;InbreedingCoeff=0.6931;MQ=71.19;MQ0=4;MQRankSum=1.240;QD=10.11;ReadPosRankSum=4.592;VQSLOD=0.9522;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:36:54.05:0,54,557	0/0:1,0:6:9.98:0,10,34	0/1:29,0:15:8.87:9,0,87	0/0:19,0:12:10.80:0,11,67	0/0:5,0:20:7.74:0,8,98	1/1:7,14:22:29.80:308,30,0	1/1:5,19:24:38.88:343,39,0	0/0:9,0:40:60.46:0,60,414	0/0:7,0:11:12.99:0,13,75	1/1:8,23:31:53.64:470,54,0	1/1:2,17:19:35.78:309,36,0	1/1:8,11:20:35.53:294,36,0	0/1:4,11:16:0.23:146,0,0	1/1:3,8:12:4.94:95,5,0	0/0:8,0:31:58.92:0,59,278	0/0:5,1:19:5.28:0,5,117	0/0:8,0:15:15.01:0,15,139	0/0:3,0:24:33.02:0,33,313	0/0:13,0:22:34.26:0,34,217	0/1:10,1:13:5.59:6,0,107	0/0:8,0:17:14.96:0,15,104	0/1:4,5:12:3.69:51,0,4	1/1:1,10:13:17.57:188,18,0	1/1:1,20:22:32.79:335,33,0	0/0:4,0:11:12.99:0,13,74	0/0:15,0:30:24.19:0,24,212	0/0:2,1:17:6.39:0,6,77	0/0:14,0:15:35.90:0,36,300
chr10	95888509	.	GGATCTGAT	G	10602.43	PASS	AB=0.606;AC=25;AF=0.446;AN=56;BaseQRankSum=15.471;DP=602;FS=2.192;HRun=0;HaplotypeScore=159.0732;InbreedingCoeff=0.8973;MQ=54.49;MQ0=7;MQRankSum=-15.358;QD=50.97;ReadPosRankSum=-0.022;VQSLOD=4.8208;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:93.32:0,93,3877	1/1:2,9:10:17.99:485,18,0	0/0:30,0:23:66.22:0,66,2584	0/0:37,0:25:69.22:0,69,2561	1/1:2,16:18:30.02:725,30,0	0/0:29,0:29:87.28:0,87,3471	0/0:28,0:28:63.22:0,63,2483	1/1:6,9:15:24.08:606,24,0	1/1:2,15:17:39.13:1052,39,0	0/0:27,0:27:75.26:0,75,3222	0/0:20,0:20:51.18:0,51,2185	0/0:26,0:26:78.27:0,78,3279	0/0:25,0:25:63.22:0,63,2643	0/0:17,0:17:48.14:0,48,1820	1/1:4,20:24:57.20:1525,57,0	1/1:5,20:25:54.19:1443,54,0	0/0:31,0:31:87.30:0,87,3685	0/0:28,0:28:66.20:0,66,2725	1/1:3,5:7:15.05:405,15,0	1/1:3,13:15:36.12:915,36,0	1/1:4,4:8:3.01:72,3,0	0/0:19,0:19:57.20:0,57,2451	0/0:21,0:21:60.21:0,60,2472	0/0:19,0:19:29.75:0,30,1209	1/1:4,13:17:33.11:841,33,0	0/1:7,13:19:89.93:931,0,90	1/1:3,17:20:45.15:1197,45,0	1/1:2,7:9:15.05:405,15,0
chr10	95888614	.	GAGAGGA	G	4937.14	PASS	AB=0.800;AC=30;AF=0.536;AN=56;BaseQRankSum=1.298;DP=709;FS=14.956;HRun=0;HaplotypeScore=134.1558;InbreedingCoeff=0.7520;MQ=44.23;MQ0=35;MQRankSum=-2.372;QD=13.87;ReadPosRankSum=-1.455;VQSLOD=3.2641;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:21:15.52:159,16,0	1/1:7,1:8:9.03:146,9,0	0/0:62,0:8:20.74:0,21,347	0/0:76,0:12:24.55:0,25,411	1/1:15,3:17:18.06:292,18,0	0/0:25,0:25:48.03:0,48,729	0/0:20,0:20:54.11:0,54,1020	1/1:36,0:34:36.65:273,37,0	1/1:22,0:22:25.52:496,26,0	0/1:23,0:23:21.97:22,0,782	0/0:14,0:14:14.86:0,15,167	0/0:24,0:24:32.77:0,33,580	0/0:31,0:31:25.14:0,25,604	0/0:19,0:19:18.06:0,18,367	1/1:6,17:23:6.02:140,6,0	1/1:25,6:31:47.86:802,48,0	1/1:24,0:24:20.14:218,20,0	1/1:6,0:5:5.92:73,6,0	1/1:11,0:8:10.44:129,10,0	1/1:15,1:16:11.99:180,12,0	1/1:28,0:26:3.01:37,3,0	0/0:28,0:28:35.72:0,36,454	0/0:17,0:16:26.77:0,27,407	0/0:28,0:28:23.32:0,23,600	1/1:6,18:22:12.04:279,12,0	0/1:12,24:36:24.72:803,0,25	1/1:20,5:24:57.03:890,57,0	0/0:6,0:6:3.67:0,4,61
chr10	95888618	.	GGA	G	4326	PASS	AB=0.883;AC=34;AF=0.607;AN=56;BaseQRankSum=4.845;DP=663;FS=32.531;HRun=0;HaplotypeScore=100.6577;InbreedingCoeff=0.5546;MQ=43.27;MQ0=35;MQRankSum=-2.782;QD=10.87;ReadPosRankSum=-1.611;VQSLOD=2.7194;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,7:18:20.12:244,20,0	1/1:6,0:6:8.33:73,8,0	0/0:66,0:11:29.75:0,30,470	0/0:83,2:11:24.08:0,24,401	1/1:16,0:15:16.96:205,17,0	0/0:23,0:24:50.99:0,51,723	0/0:21,0:21:30.93:0,31,825	1/1:17,1:28:30.80:331,31,0	1/1:19,1:20:31.88:460,32,0	0/1:20,0:20:9.49:9,0,657	0/0:11,0:11:14.74:0,15,150	0/1:15,9:24:12.67:13,0,487	0/1:28,1:29:0.37:0,0,466	0/0:17,0:17:18.06:0,18,259	1/1:21,0:20:5.98:45,6,0	1/1:26,0:26:48.30:610,48,0	1/1:4,12:23:24.52:335,25,0	1/1:8,0:6:14.64:126,15,0	0/1:5,6:8:25.40:198,0,25	1/1:11,2:13:14.90:156,15,0	1/1:5,25:28:1.25:3,1,0	0/1:20,1:21:21.97:22,0,293	0/0:14,0:13:24.99:0,25,369	0/0:26,0:26:18.79:0,19,513	1/1:19,0:18:11.95:91,12,0	0/1:32,0:32:5.89:654,0,6	1/1:24,0:23:47.38:637,47,0	1/1:3,2:5:13.58:113,14,0
chr10	95888622	.	GAGAGGA	G	491.95	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=5.955;DP=617;FS=15.426;HRun=0;HaplotypeScore=131.7748;InbreedingCoeff=0.4358;MQ=43.11;MQ0=35;MQRankSum=1.429;QD=2.48;ReadPosRankSum=-0.167;VQSLOD=1.8435;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:19:14.50:157,14,0	1/1:2,0:2:1.42:4,1,0	0/0:67,0:11:32.69:0,33,799	0/0:86,0:11:27.56:0,28,712	0/0:13,0:12:3:0,3,33	0/0:24,0:24:51.17:0,51,1401	0/0:23,0:23:60.21:0,60,1641	1/1:22,0:21:24.42:145,24,0	0/0:14,0:14:5.32:0,5,124	0/0:19,0:19:44.98:0,45,1299	0/0:9,0:9:15.05:0,15,311	0/0:22,0:22:39:0,39,1070	0/0:27,0:27:30:0,30,946	0/0:18,0:18:24.08:0,24,638	0/0:19,0:18:6.38:0,6,50	0/1:24,0:24:31.83:32,0,127	1/1:17,5:22:11.28:156,11,0	1/1:9,0:8:5.93:73,6,0	0/0:12,0:9:8.15:0,8,125	0/1:7,0:7:16.41:31,0,16	1/1:25,0:23:3:28,3,0	0/0:20,0:20:36.11:0,36,845	0/0:13,0:12:27.09:0,27,790	0/0:27,0:27:45.15:0,45,1164	0/1:19,0:18:5.01:5,0,45	0/1:29,0:29:5.74:6,0,219	0/1:16,0:15:25.11:25,0,63	0/0:6,0:6:11.50:0,12,94
chr10	95888626	.	GGA	G	319.86	PASS	AB=0.984;AC=7;AF=0.125;AN=56;BaseQRankSum=4.760;DP=575;FS=35.615;HRun=0;HaplotypeScore=104.5252;InbreedingCoeff=0.4157;MQ=42.89;MQ0=34;MQRankSum=-3.686;QD=4.44;ReadPosRankSum=-1.738;VQSLOD=1.0308;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,7:14:17.01:216,17,0	0/0:2,0:2:5.97:0,6,60	0/0:66,0:11:31.91:0,32,566	0/0:90,0:14:35.71:0,36,634	0/0:11,0:10:14.95:0,15,203	0/0:22,0:22:57.05:0,57,1049	0/0:23,0:23:63.22:0,63,1215	0/1:25,0:24:33.69:34,0,163	0/0:12,0:12:30.08:0,30,383	0/0:17,0:17:48.16:0,48,937	0/0:7,0:7:15.05:0,15,297	0/0:17,0:17:8.83:0,9,677	0/0:24,0:24:15.74:0,16,695	0/0:16,0:16:27.09:0,27,526	0/0:17,0:16:12.02:0,12,141	0/0:24,0:24:57.96:0,58,661	0/1:19,1:20:13.82:69,0,14	1/1:6,1:7:9.84:94,10,0	0/0:14,0:11:28.76:0,29,389	0/0:7,0:7:6.79:0,7,143	0/0:23,0:21:7.61:0,8,72	0/0:18,0:18:40.44:0,40,730	0/0:14,0:13:30.15:0,30,587	0/0:25,0:25:45.15:0,45,889	0/0:15,0:14:13.82:0,14,141	0/0:23,0:23:53.96:0,54,567	0/0:16,0:15:44.27:0,44,503	0/1:5,0:5:43.73:44,0,59
chr10	95888647	.	AGAGGAAGAG	A	577.88	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.090;DP=559;FS=7.089;HRun=0;HaplotypeScore=153.0258;InbreedingCoeff=0.9248;MQ=53.26;MQ0=13;MQRankSum=-4.404;QD=21.40;ReadPosRankSum=-0.552;VQSLOD=1.8515;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:42.12:0,42,1077	0/0:6,0:6:18.06:0,18,671	0/0:47,0:16:24.08:0,24,709	0/0:69,0:16:23.10:0,23,592	0/0:16,0:16:30.03:0,30,1065	0/0:27,0:27:66.23:0,66,2839	0/0:23,0:23:63.22:0,63,2315	0/0:19,0:19:42.12:0,42,1154	0/0:18,0:18:48.16:0,48,1521	0/0:19,0:19:54.19:0,54,2439	0/0:7,0:7:21.07:0,21,472	0/0:18,0:18:51.18:0,51,1981	0/0:20,0:20:48.16:0,48,1938	0/0:16,0:16:39.13:0,39,1496	0/0:16,0:15:27.09:0,27,908	0/0:25,0:25:63.69:0,64,2140	1/1:11,5:16:20.57:432,21,0	1/1:3,8:11:8.74:258,9,0	0/0:15,0:12:18.01:0,18,438	0/0:9,0:9:21.07:0,21,705	0/0:25,0:23:14.57:0,15,525	0/0:14,0:14:30.10:0,30,1104	0/0:17,0:17:36.12:0,36,1452	0/0:23,0:23:47.99:0,48,1636	0/0:18,0:18:27.01:0,27,728	0/0:28,0:28:72.25:0,72,2324	0/0:15,0:15:36.08:0,36,1179	0/0:4,0:4:12.04:0,12,468
chr10	95888880	.	AC	A	868.64	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.668;DP=734;FS=3.558;HRun=3;HaplotypeScore=92.7543;InbreedingCoeff=0.9988;MQ=79.07;MQ0=0;MQRankSum=-1.892;QD=29.95;ReadPosRankSum=-2.689;VQSLOD=2.2802;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,150,2091	0/0:15,0:15:42.11:0,42,562	0/0:16,0:16:48.10:0,48,637	0/0:20,0:20:43.13:0,43,619	0/0:13,0:13:39.13:0,39,546	0/0:22,0:22:63.20:0,63,888	0/0:29,0:29:78.25:0,78,1103	1/1:2,19:21:57.16:693,57,0	0/0:27,0:27:78.25:0,78,1077	0/0:27,0:27:81.27:0,81,1142	0/0:15,0:15:39.07:0,39,518	0/0:42,0:42:99:0,126,1789	0/0:34,0:34:99:0,99,1423	0/0:31,0:31:93.28:0,93,1286	0/0:25,0:25:75.22:0,75,1019	0/0:32,0:32:93.30:0,93,1290	0/0:39,0:39:99:0,111,1595	0/0:27,0:27:81.26:0,81,1147	0/0:20,0:20:54.17:0,54,739	0/0:21,0:20:54.15:0,54,734	0/0:46,0:46:99:0,135,1865	0/0:19,0:19:54.16:0,54,744	0/0:24,0:24:72.13:0,72,1005	0/0:28,0:28:81.20:0,81,1073	0/0:20,0:20:57.12:0,57,778	0/0:34,0:34:99:0,99,1366	0/0:26,0:26:78.20:0,78,1054	1/1:0,8:8:24.08:297,24,0
chr10	95890208	.	GGT	G	1743.01	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=0.629;DP=692;FS=12.147;HRun=0;HaplotypeScore=145.4783;InbreedingCoeff=0.7933;MQ=68.37;MQ0=5;MQRankSum=3.395;QD=14.41;ReadPosRankSum=2.148;VQSLOD=2.9852;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,28:40:59.96:680,60,0	0/0:10,0:11:21:0,21,182	0/0:31,0:21:11.08:0,11,95	0/1:32,0:24:40.56:41,0,72	0/0:19,0:19:31.47:0,31,212	0/0:20,1:21:15.20:0,15,731	0/0:30,2:32:33.26:0,33,988	0/0:12,0:31:68.96:0,69,679	0/0:31,0:31:59.90:0,60,503	0/0:20,0:20:39.13:0,39,600	0/0:18,1:19:24.99:0,25,558	0/0:36,0:36:73.52:0,74,1428	0/0:23,0:23:60.20:0,60,943	0/0:21,0:21:42.09:0,42,631	0/0:27,0:27:44.96:0,45,381	0/0:17,0:17:32.93:0,33,275	1/1:5,27:32:66.20:791,66,0	1/1:4,9:17:38.45:380,38,0	0/0:20,0:20:29.83:0,30,237	0/0:18,0:18:35.27:0,35,267	0/0:31,0:31:6.12:0,6,46	0/0:20,0:20:48.13:0,48,696	0/0:18,0:18:45.15:0,45,716	0/0:45,3:49:51.46:0,51,1721	0/0:15,0:15:29.61:0,30,232	0/0:24,0:24:50.70:0,51,434	0/0:19,0:20:35.74:0,36,297	0/0:2,0:16:36:0,36,326
chr10	95890228	.	T	TGTGTGC	11598.15	PASS	AB=0.960;AC=23;AF=0.411;AN=56;BaseQRankSum=-7.614;DP=732;FS=9.138;HRun=0;HaplotypeScore=162.7749;InbreedingCoeff=0.8922;MQ=63.70;MQ0=7;MQRankSum=-9.762;QD=39.72;ReadPosRankSum=1.583;VQSLOD=4.1838;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,111,1391	1/1:2,5:9:21.07:674,21,0	0/0:24,0:11:10.92:0,11,79	0/1:23,0:15:29.30:29,0,182	1/1:2,13:19:18.06:586,18,0	0/0:20,0:20:60.16:0,60,1251	0/0:36,0:36:76.86:0,77,1775	0/0:31,0:31:7.40:0,7,524	1/1:2,23:34:57.03:1776,57,0	0/0:17,0:17:51.14:0,51,927	0/0:23,0:22:60.09:0,60,1090	0/0:39,0:39:99:0,117,2318	0/0:23,0:23:69.19:0,69,1475	0/0:21,0:21:60.10:0,60,1105	1/1:2,22:31:42.14:1415,42,0	1/1:3,14:20:33.11:1043,33,0	0/0:36,0:36:87.14:0,87,1296	0/0:17,0:17:48.04:0,48,716	1/1:5,10:19:50.61:854,51,0	1/1:4,16:25:30.10:987,30,0	1/1:9,19:35:5.83:136,6,0	0/0:16,0:16:45.14:0,45,1010	0/0:19,0:19:54.14:0,54,1171	0/0:51,0:51:99:0,150,2793	1/1:4,11:20:28.65:796,29,0	1/1:2,27:31:61.17:2020,61,0	1/1:5,13:25:39.13:1281,39,0	0/0:16,0:16:34.43:0,34,160
chr10	95890680	.	C	CTACCCTCTA	2008.45	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=2.404;DP=651;FS=19.061;HRun=0;HaplotypeScore=178.9520;InbreedingCoeff=0.8355;MQ=77.24;MQ0=0;MQRankSum=-5.903;QD=34.04;ReadPosRankSum=-4.009;VQSLOD=1.5555;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:87.26:0,87,2164	0/0:8,0:8:21.07:0,21,545	0/0:24,0:24:15.59:0,16,971	0/1:18,0:18:2.36:2,0,546	0/0:27,0:27:60.18:0,60,1493	0/0:23,0:23:48.12:0,48,1293	0/0:23,0:23:54.14:0,54,1432	1/1:19,8:28:48.14:1429,48,0	0/0:27,0:27:63.17:0,63,1692	0/0:27,0:27:63.22:0,63,1765	0/0:14,0:14:33.10:0,33,878	0/0:25,0:25:51.11:0,51,1300	0/0:15,0:15:42.14:0,42,1177	0/0:15,0:15:39.08:0,39,986	0/0:29,0:29:72.25:0,72,2007	0/0:25,0:25:72.21:0,72,1932	0/0:21,0:21:54.19:0,54,1522	0/0:12,0:12:27.09:0,27,769	0/0:23,0:23:48.16:0,48,1303	0/0:22,0:22:51.17:0,51,1406	0/0:39,0:39:84.29:0,84,2350	0/0:25,0:25:57.18:0,57,1383	0/0:19,0:19:42.13:0,42,1115	0/0:18,0:18:48.16:0,48,1317	0/0:19,0:19:48.13:0,48,1213	0/0:31,0:31:81.14:0,81,2065	0/0:35,0:35:78.20:0,78,2144	1/1:5,6:13:15.05:697,15,0
chr10	95890887	.	GCAGGAAGT	G	11094.63	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.932;DP=598;FS=17.355;HRun=0;HaplotypeScore=166.8557;InbreedingCoeff=0.9954;MQ=87.16;MQ0=0;MQRankSum=-15.931;QD=57.78;ReadPosRankSum=4.405;VQSLOD=3.8142;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.19:0,90,2545	1/1:0,7:7:15.05:401,15,0	0/0:31,0:31:84.12:0,84,2826	0/0:32,0:32:87.12:0,87,2810	1/1:0,16:16:24.05:583,24,0	0/0:25,0:25:72.23:0,72,2588	0/0:22,0:22:66.21:0,66,2630	0/0:30,0:30:87.26:0,87,2952	1/1:1,19:20:45.15:1288,45,0	0/0:28,0:28:84.17:0,84,2434	0/0:22,0:22:60.09:0,60,1559	0/0:27,0:27:81.22:0,81,3066	0/0:13,0:13:39.12:0,39,1585	0/0:16,0:16:48.14:0,48,1931	1/1:0,22:22:57.15:1491,57,0	1/1:0,20:20:51.18:1449,51,0	0/0:25,0:25:66.23:0,66,2563	0/0:25,0:25:72.25:0,72,2888	1/1:1,16:18:50.93:956,51,0	1/1:0,14:14:24.08:683,24,0	1/1:2,15:17:18.06:515,18,0	0/0:29,0:29:87.21:0,87,2820	0/0:23,0:23:66.14:0,66,2037	0/0:17,0:17:51.18:0,51,2138	1/1:1,7:8:21.07:570,21,0	1/1:0,27:27:72.21:1827,72,0	1/1:1,22:23:48.01:1331,48,0	0/0:11,0:11:33.11:0,33,1474
chr10	95891477	.	C	CAA	277.77	PASS	AB=0.702;AC=2;AF=0.037;AN=54;BaseQRankSum=5.689;DP=181;FS=42.700;HRun=0;HaplotypeScore=37.4054;InbreedingCoeff=-0.1075;MQ=105.77;MQ0=0;MQRankSum=5.370;QD=11.57;ReadPosRankSum=-1.031;VQSLOD=1.2201;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:24.08:0,24,391	0/0:1,0:1:3.01:0,3,49	0/1:5,8:13:64.46:285,0,64	0/1:8,3:11:79.60:80,0,186	0/0:2,0:2:6.02:0,6,97	0/0:2,0:2:3.01:0,3,49	0/0:11,0:11:30.10:0,30,489	0/0:4,0:4:12.04:0,12,195	0/0:2,0:2:6.02:0,6,87	0/0:2,0:2:6.02:0,6,94	0/0:1,0:1:3.01:0,3,49	0/0:8,0:8:24.08:0,24,391	0/0:3,0:3:9.03:0,9,147	0/0:5,0:5:15.05:0,15,240	0/0:5,0:5:15.05:0,15,245	0/0:3,0:3:9.03:0,9,147	0/0:16,0:16:44.97:0,45,733	0/0:23,0:23:69.24:0,69,1125	0/0:6,0:6:18.06:0,18,292	./.	0/0:24,0:24:72.25:0,72,1168	0/0:2,0:2:2.87:0,3,49	0/0:1,0:1:3.01:0,3,49	0/0:11,0:11:33.11:0,33,536	0/0:3,0:3:6.02:0,6,98	0/0:7,0:7:21.07:0,21,341	0/0:5,0:5:12.03:0,12,172	0/0:1,0:1:3.01:0,3,49
chr10	95891478	.	G	GACA	280.51	PASS	AB=0.702;AC=2;AF=0.037;AN=54;BaseQRankSum=5.103;DP=182;FS=36.643;HRun=0;HaplotypeScore=41.7253;InbreedingCoeff=-0.1085;MQ=105.57;MQ0=0;MQRankSum=5.010;QD=11.69;ReadPosRankSum=-1.434;VQSLOD=1.2377;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:24.08:0,24,447	0/0:1,0:1:3.01:0,3,56	0/1:5,5:13:81.58:283,0,82	0/1:8,2:11:84.25:84,0,196	0/0:2,0:2:6.02:0,6,109	0/0:2,0:2:3.01:0,3,56	0/0:11,0:11:30.10:0,30,559	0/0:4,0:4:12.04:0,12,222	0/0:2,0:2:6:0,6,79	0/0:2,0:2:6.02:0,6,99	0/0:1,0:1:3.01:0,3,56	0/0:8,0:8:24.08:0,24,435	0/0:3,0:3:9.03:0,9,168	0/0:5,0:5:15.05:0,15,273	0/0:5,0:5:15.05:0,15,280	0/0:3,0:3:9.03:0,9,168	0/0:16,0:16:45.15:0,45,838	0/0:23,0:23:69.24:0,69,1272	0/0:7,0:7:18.06:0,18,327	./.	0/0:24,0:24:72.23:0,72,1278	0/0:2,0:2:3.01:0,3,56	0/0:1,0:1:3.01:0,3,56	0/0:11,0:11:33.11:0,33,609	0/0:3,0:3:6.02:0,6,112	0/0:7,0:7:21.06:0,21,334	0/0:4,0:4:9.03:0,9,168	0/0:1,0:1:3.01:0,3,56
chr10	95892801	.	GGTTTTTTTTTTTTTTTTTTTTTTT	G	10645.51	PASS	AB=0.619;AC=28;AF=0.500;AN=56;BaseQRankSum=11.385;DP=575;FS=36.211;HRun=0;HaplotypeScore=232.2064;InbreedingCoeff=0.6422;MQ=68.55;MQ0=40;MQRankSum=-4.971;QD=33.48;ReadPosRankSum=6.425;VQSLOD=1.8738;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:28:12.04:403,12,0	1/1:1,10:11:20.88:1017,21,0	0/0:51,0:12:31.66:0,32,415	0/0:56,0:18:38.24:0,38,627	1/1:3,19:23:29.94:971,30,0	0/0:12,0:11:30.09:0,30,1781	0/0:7,0:7:21.06:0,21,1062	1/1:19,0:17:50.54:355,51,0	1/1:1,18:20:11.04:564,11,0	0/0:22,0:21:56.90:0,57,2459	0/0:14,0:13:39.12:0,39,2060	0/0:24,0:23:66.15:0,66,2752	0/0:11,0:10:30.02:0,30,1141	0/0:15,0:14:33.95:0,34,1304	1/1:0,20:21:8.07:553,8,0	1/1:0,18:18:20.38:1150,20,0	0/1:17,2:20:15.61:519,0,16	1/1:1,0:13:3.02:381,3,0	1/1:12,0:11:14.01:437,14,0	1/1:2,20:21:47.56:1315,48,0	0/1:1,18:19:12.08:182,0,12	0/0:17,0:14:42.03:0,42,1339	0/0:18,0:16:45.10:0,45,1655	0/0:10,0:7:19.58:0,20,827	0/1:5,18:20:41.42:812,0,41	0/1:4,28:31:99:1088,0,300	1/1:4,21:21:2.67:188,3,0	1/1:2,0:7:12.04:710,12,0
chr10	95893488	.	A	AGCT	2845.90	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.377;DP=826;FS=0.000;HRun=0;HaplotypeScore=114.3710;InbreedingCoeff=1.0000;MQ=84.25;MQ0=0;MQRankSum=-5.762;QD=64.68;ReadPosRankSum=-1.440;VQSLOD=4.4166;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,163,2918	0/0:18,0:18:51.15:0,51,911	0/0:25,0:25:66.19:0,66,1140	0/0:24,0:24:62.06:0,62,1037	0/0:18,0:18:54.19:0,54,996	0/0:32,0:32:96.30:0,96,1728	0/0:39,0:39:99:0,114,2047	1/1:4,23:30:87.18:1932,87,0	0/0:24,0:24:72.22:0,72,1271	0/0:36,0:36:99:0,108,1982	0/0:21,0:21:63.20:0,63,1130	0/0:40,0:40:99:0,120,2211	0/0:31,0:31:90.29:0,90,1615	0/0:31,0:31:93.29:0,93,1671	0/0:44,0:44:99:0,132,2382	0/0:29,0:29:84.29:0,84,1560	0/0:25,0:25:72.22:0,72,1288	0/0:24,0:24:69.21:0,69,1242	0/0:22,0:22:66.22:0,66,1193	0/0:30,0:30:90.31:0,90,1670	0/0:54,0:54:99:0,162,2917	0/0:21,0:21:63.22:0,63,1169	0/0:28,0:28:84.27:0,84,1532	0/0:26,0:26:78.27:0,78,1454	0/0:19,0:19:57.17:0,57,1030	0/0:36,0:36:99:0,102,1893	0/0:31,0:31:87.30:0,87,1607	1/1:0,14:14:42.14:1035,42,0
chr10	95894367	.	CCCAT	C	572.90	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.404;DP=455;FS=21.200;HRun=0;HaplotypeScore=80.9499;InbreedingCoeff=0.9391;MQ=88.33;MQ0=0;MQRankSum=-3.863;QD=35.81;ReadPosRankSum=-3.973;VQSLOD=0.7864;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.18:0,60,1557	0/0:7,0:7:21.07:0,21,575	0/0:20,0:20:42.29:0,42,1169	0/0:16,0:16:36.09:0,36,819	0/0:16,0:16:45.15:0,45,1216	0/0:17,0:17:51.18:0,51,1379	0/0:18,0:18:51.18:0,51,1342	1/1:1,13:13:36.10:633,36,0	0/0:13,0:13:33.11:0,33,903	0/0:14,0:14:39.13:0,39,1044	0/0:8,0:8:24.08:0,24,636	0/0:15,0:15:42.14:0,42,1150	0/0:16,0:16:48.16:0,48,1306	0/0:13,0:13:39.13:0,39,1068	0/0:14,0:14:39.12:0,39,1010	0/0:15,0:15:45.15:0,45,1224	0/0:32,0:32:87.30:0,87,2308	0/0:14,0:14:39.13:0,39,1068	0/0:12,0:12:36.12:0,36,945	0/0:15,0:15:45.15:0,45,1221	0/0:34,0:34:99:0,99,2669	0/0:18,0:18:51.15:0,51,1227	0/0:9,0:9:27.09:0,27,705	0/0:29,0:29:81.26:0,81,2139	0/0:15,0:15:45.15:0,45,1209	0/0:20,0:20:60.20:0,60,1561	0/0:15,0:15:42.14:0,42,1133	1/1:2,0:2:6:52,6,0
chr10	95894947	.	GTC	G	15630.46	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=12.767;DP=762;FS=7.734;HRun=0;HaplotypeScore=97.9506;InbreedingCoeff=0.9856;MQ=83.69;MQ0=0;MQRankSum=-1.804;QD=39.67;ReadPosRankSum=3.938;VQSLOD=6.8856;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,49:49:99:1898,129,0	1/1:0,11:11:33.11:486,33,0	0/0:30,0:30:87.21:0,87,1450	0/0:21,0:21:60.20:0,60,1071	1/1:0,12:12:33.11:486,33,0	0/0:24,0:24:69.24:0,69,1277	0/0:27,0:27:69.24:0,69,1276	0/0:27,0:27:75.26:0,75,1374	1/1:3,30:33:90.30:1324,90,0	0/0:32,0:32:93.31:0,93,1674	0/0:16,0:16:45.15:0,45,828	0/0:40,0:40:99:0,117,2161	0/0:37,0:37:99:0,105,1967	0/0:28,0:28:78.26:0,78,1434	1/1:0,40:40:99:1634,111,0	1/1:0,24:24:69.23:1015,69,0	1/1:1,28:29:78.26:1149,78,0	1/1:0,20:20:48.16:707,48,0	1/1:1,20:21:60.20:882,60,0	1/1:1,17:18:39.13:574,39,0	1/1:2,62:64:99:2474,169,0	0/0:25,0:25:75.26:0,75,1380	0/0:16,0:16:42.14:0,42,786	0/0:41,0:41:99:0,120,2247	1/1:0,21:21:54.18:794,54,0	1/1:0,21:21:63.21:927,63,0	1/1:1,30:31:87.29:1280,87,0	0/0:4,0:4:6.02:0,6,112
chr10	95894960	.	T	TTAC	1132.35	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.579;DP=722;FS=5.029;HRun=0;HaplotypeScore=158.9865;InbreedingCoeff=0.9404;MQ=83.77;MQ0=0;MQRankSum=-4.778;QD=53.92;ReadPosRankSum=-2.461;VQSLOD=4.5931;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,2277	0/0:13,0:13:36.12:0,36,671	0/0:26,0:26:69.24:0,69,1281	0/0:19,0:19:48.16:0,48,853	0/0:12,0:12:36.12:0,36,671	0/0:22,0:22:66.20:0,66,1158	0/0:21,0:21:63.22:0,63,1175	1/1:0,14:17:51.16:1158,51,0	0/0:32,0:32:90.31:0,90,1664	0/0:29,0:29:84.28:0,84,1525	0/0:16,0:16:45.14:0,45,809	0/0:40,0:40:99:0,117,2180	0/0:33,0:33:99:0,99,1834	0/0:29,0:29:84.29:0,84,1559	0/0:45,0:45:99:0,120,2164	0/0:22,0:22:63.22:0,63,1174	0/0:30,0:30:81.28:0,81,1510	0/0:18,0:18:48.16:0,48,883	0/0:21,0:21:63.20:0,63,1124	0/0:14,0:14:39.12:0,39,694	0/0:56,0:56:99:0,159,2910	0/0:25,0:25:72.25:0,72,1335	0/0:13,0:13:39.13:0,39,727	0/0:46,0:46:99:0,135,2462	0/0:18,0:18:48.16:0,48,895	0/0:23,0:23:69.24:0,69,1282	0/0:34,0:34:96.33:0,96,1762	1/1:0,1:4:5.75:86,6,0
chr10	95895474	.	AG	A	5332.36	PASS	AB=0.884;AC=55;AF=0.982;AN=56;BaseQRankSum=-2.815;DP=391;FS=7.954;HRun=3;HaplotypeScore=41.3681;InbreedingCoeff=0.0019;MQ=69.60;MQ0=15;MQRankSum=-0.934;QD=13.64;ReadPosRankSum=-0.590;VQSLOD=2.8110;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:29.14:220,29,0	1/1:7,0:5:8.98:72,9,0	1/1:36,4:5:11.98:99,12,0	0/1:33,5:12:16.96:82,0,17	1/1:13,0:13:20.76:155,21,0	1/1:8,0:8:20.64:147,21,0	1/1:7,1:8:20.97:173,21,0	1/1:10,0:12:23.49:153,23,0	1/1:15,0:15:38.98:330,39,0	1/1:7,6:12:15.97:123,16,0	1/1:1,10:11:23.59:153,24,0	1/1:10,0:9:17.88:141,18,0	1/1:13,0:12:26.66:204,27,0	1/1:11,0:10:23.96:198,24,0	1/1:12,0:12:26.92:217,27,0	1/1:18,0:18:32.03:354,32,0	1/1:20,0:20:47.77:371,48,0	1/1:18,0:18:35.87:286,36,0	1/1:13,0:13:28.12:219,28,0	1/1:1,13:15:38.23:235,38,0	1/1:13,0:12:29.94:245,30,0	1/1:8,0:8:14.90:123,15,0	1/1:7,1:7:2.71:14,3,0	1/1:10,0:10:23.79:180,24,0	1/1:12,0:12:29.34:216,29,0	1/1:9,0:9:26.89:217,27,0	1/1:16,0:16:41.50:306,41,0	1/1:6,0:7:14.80:98,15,0
chr10	95895476	.	GGTTTTTTT	G	2943.21	PASS	AB=0.993;AC=40;AF=0.714;AN=56;BaseQRankSum=-5.039;DP=398;FS=47.817;HRun=0;HaplotypeScore=90.1255;InbreedingCoeff=-0.4339;MQ=65.87;MQ0=18;MQRankSum=3.366;QD=7.39;ReadPosRankSum=-0.995;VQSLOD=-0.6070;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:60.84:61,0,390	1/1:6,0:4:8.98:72,9,0	1/1:42,0:4:11.99:101,12,0	0/1:39,0:12:90.26:90,0,189	0/1:15,0:15:46.81:47,0,433	1/1:8,0:8:18.66:143,19,0	1/1:6,0:7:21:256,21,0	0/1:15,0:14:98.99:99,0,149	0/1:16,0:16:99:215,0,237	1/1:11,0:10:8.94:112,9,0	1/1:10,0:10:19.23:181,19,0	1/1:9,0:8:11.95:119,12,0	1/1:12,0:11:21.26:185,21,0	1/1:11,0:10:8.46:155,8,0	0/1:11,0:11:93.55:94,0,289	0/1:20,0:20:99:130,0,832	0/1:20,0:20:40.74:41,0,677	0/1:14,0:15:99:107,0,326	0/1:14,0:12:99:141,0,156	0/1:18,0:18:99:100,0,544	0/1:11,0:10:99:141,0,146	1/1:6,0:6:11.46:117,11,0	1/1:2,6:7:1.68:50,2,0	1/1:9,0:9:22.61:161,23,0	0/1:15,0:15:62.72:63,0,714	0/1:11,0:11:50.62:51,0,330	0/1:16,0:17:51.55:52,0,703	0/1:9,0:8:19.40:19,0,312
chr10	95895506	.	G	GT	1168.82	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-5.526;DP=371;FS=0.000;HRun=0;HaplotypeScore=57.1972;InbreedingCoeff=0.3681;MQ=71.31;MQ0=18;MQRankSum=0.759;QD=4.36;ReadPosRankSum=1.551;VQSLOD=3.1150;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:6.55:31,7,0	1/1:5,0:5:2.79:22,3,0	0/0:43,0:10:11.69:0,12,123	0/0:45,0:14:13.66:0,14,167	0/1:9,0:9:1.64:12,0,2	1/1:12,0:12:8.56:37,9,0	1/1:10,0:10:0.05:1,0,0	1/1:0,12:12:36.12:535,36,0	1/1:7,0:6:2.42:7,2,0	1/1:9,0:8:2.36:10,2,0	0/0:13,0:13:0.72:0,1,3	1/1:7,0:6:3.93:27,4,0	0/1:8,0:8:0.01:1,0,0	0/1:10,0:10:8.84:17,0,9	1/1:10,0:10:1.15:1,1,0	1/1:12,0:12:17.73:98,18,0	0/1:18,0:18:0.61:1,0,8	0/1:12,0:12:3.90:4,0,5	1/1:10,0:9:7.94:39,8,0	1/1:18,0:18:8.73:40,9,0	1/1:5,0:5:1.93:4,2,0	1/1:8,0:8:2.20:4,2,0	1/1:18,0:18:6.14:15,6,0	1/1:7,0:7:1.58:3,2,0	1/1:8,0:8:9.81:68,10,0	1/1:9,0:9:3.23:30,3,0	1/1:14,0:14:11.91:66,12,0	1/1:7,9:14:15.05:225,15,0
chr10	95895614	.	C	CAA	609.60	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=-1.375;DP=451;FS=6.445;HRun=8;HaplotypeScore=75.4148;InbreedingCoeff=0.8705;MQ=56.33;MQ0=6;MQRankSum=-5.511;QD=25.40;ReadPosRankSum=-3.613;VQSLOD=2.4398;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:51.13:0,51,562	0/0:8,0:8:18.04:0,18,200	./.	0/0:10,0:6:5.89:0,6,22	0/0:16,0:16:23.80:0,24,262	0/0:21,0:21:39.05:0,39,434	0/0:13,0:13:20.98:0,21,219	1/1:15,6:20:46.88:628,47,0	0/0:12,0:11:20.89:0,21,228	0/0:16,0:16:30.04:0,30,324	0/0:26,0:26:45.59:0,46,490	0/0:11,0:11:33.05:0,33,340	0/0:10,0:10:24.05:0,24,262	0/0:15,0:14:33.03:0,33,345	0/0:15,0:14:36.08:0,36,389	0/0:19,0:19:41.98:0,42,455	0/0:33,0:33:75.14:0,75,810	0/0:21,0:21:54.04:0,54,594	0/0:12,0:12:27.06:0,27,294	0/0:15,0:15:17.95:0,18,168	0/0:10,0:9:18.05:0,18,199	0/0:15,0:15:29.83:0,30,298	0/0:21,0:21:38.63:0,39,421	0/0:20,0:20:25.17:0,25,446	0/0:23,0:22:45.12:0,45,498	0/0:12,0:11:21.04:0,21,232	0/0:22,0:21:39.03:0,39,408	1/1:2,1:3:6.02:93,6,0
chr10	95895623	.	GAA	G	3145.63	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=1.170;DP=465;FS=3.853;HRun=14;HaplotypeScore=62.2974;InbreedingCoeff=0.8864;MQ=57.79;MQ0=6;MQRankSum=3.957;QD=14.04;ReadPosRankSum=6.899;VQSLOD=2.3740;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,16:23:26.80:297,27,0	1/1:3,6:10:5.84:101,6,0	0/0:19,0:5:12.43:0,12,75	0/0:16,0:7:0.55:0,1,91	1/1:5,9:14:15.68:175,16,0	0/0:19,1:20:17.77:0,18,476	0/0:11,0:11:27.02:0,27,323	0/0:19,0:32:63.17:0,63,491	1/1:4,7:10:1.56:181,2,0	0/0:19,0:19:45.04:0,45,536	0/0:22,0:22:48.07:0,48,591	0/0:15,0:15:35.52:0,36,414	0/0:13,0:13:24.07:0,24,318	0/0:13,0:12:27.05:0,27,356	1/1:3,10:13:26.75:234,27,0	1/1:6,15:21:26.61:249,27,0	1/1:6,20:27:31.10:496,31,0	1/1:2,19:22:43.32:439,43,0	1/1:2,12:14:32.98:300,33,0	1/1:3,6:9:10.20:86,10,0	1/1:2,6:7:15.01:139,15,0	0/0:13,1:14:8.27:0,8,363	0/0:17,0:18:35.59:0,36,449	0/0:20,0:20:50.36:0,50,654	1/1:8,13:21:23.77:269,24,0	1/1:3,8:11:19.70:188,20,0	1/1:8,10:17:17.70:213,18,0	0/0:2,0:8:9.01:0,9,86
chr10	95896518	.	A	AT	890.35	PASS	AB=0.857;AC=5;AF=0.089;AN=56;BaseQRankSum=-5.323;DP=439;FS=7.138;HRun=9;HaplotypeScore=89.9262;InbreedingCoeff=0.4157;MQ=65.42;MQ0=0;MQRankSum=1.711;QD=14.84;ReadPosRankSum=-3.361;VQSLOD=2.8965;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,1:19:8.81:0,9,305	0/0:5,0:5:15:0,15,130	0/0:7,0:7:11.80:0,12,86	0/1:9,0:8:13.82:14,0,15	0/0:17,1:18:29.97:0,30,260	0/0:20,0:20:59.01:0,59,498	0/0:17,0:17:41.97:0,42,360	1/1:12,24:36:80.73:842,81,0	0/0:13,0:13:29.96:0,30,256	0/0:21,0:21:56.97:0,57,491	0/0:16,0:17:50.03:0,50,423	0/0:11,0:12:32.01:0,32,262	0/0:18,0:18:44.96:0,45,391	0/0:6,0:6:15:0,15,130	0/0:11,0:11:26.96:0,27,231	0/0:16,0:16:41.99:0,42,365	0/0:14,0:14:35.83:0,36,300	0/1:7,0:7:1.05:1,0,112	0/0:18,0:18:41.99:0,42,365	0/0:21,0:21:41.95:0,42,365	0/0:7,0:7:11.99:0,12,104	0/0:17,0:18:53.01:0,53,445	0/0:17,0:17:44.97:0,45,388	0/0:13,0:14:32.02:0,32,266	0/0:9,0:10:25.96:0,26,206	0/0:34,0:34:92.84:0,93,792	0/0:25,0:25:56.97:0,57,495	0/1:2,6:8:8:148,0,8
chr10	95896561	.	C	CTTCTTTCTTTTT	18521.72	PASS	AB=0.516;AC=31;AF=0.554;AN=56;BaseQRankSum=-7.291;DP=348;FS=12.380;HRun=0;HaplotypeScore=102.0635;InbreedingCoeff=0.8294;MQ=60.67;MQ0=0;MQRankSum=-11.386;QD=107.06;ReadPosRankSum=0.222;VQSLOD=4.3643;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,8:10:1.03:373,1,0	1/1:0,3:4:9.03:457,9,0	0/0:7,0:7:18.06:0,18,413	0/0:7,0:7:12.04:0,12,341	1/1:0,7:15:36.12:1184,36,0	0/0:17,0:17:51.16:0,51,1898	0/0:16,0:16:48.16:0,48,1767	1/1:25,0:23:66.23:2931,66,0	1/1:1,7:10:15.05:952,15,0	0/0:21,0:21:60.21:0,60,2106	0/0:17,0:17:51.18:0,51,1939	0/0:18,0:18:54.17:0,54,1852	0/0:15,0:15:42.12:0,42,1637	0/0:9,0:9:24.07:0,24,723	1/1:0,13:15:33.11:2094,33,0	1/1:0,5:8:6.02:381,6,0	1/1:1,6:15:15.05:878,15,0	1/1:0,5:7:9.03:571,9,0	1/1:2,11:14:36.12:1819,36,0	1/1:0,11:11:24.08:1371,24,0	1/1:1,1:2:6.02:232,6,0	0/0:14,0:14:42.14:0,42,1609	0/0:21,0:21:57.20:0,57,2052	0/0:13,0:13:36.08:0,36,1267	1/1:1,5:6:12.04:761,12,0	0/1:1,15:16:73.70:2538,0,74	1/1:1,10:11:27.09:1565,27,0	1/1:1,0:3:9.03:415,9,0
chr10	95896729	.	CATCT	C	1399.39	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.420;DP=367;FS=12.766;HRun=0;HaplotypeScore=72.2494;InbreedingCoeff=0.9159;MQ=94.92;MQ0=0;MQRankSum=-6.109;QD=55.98;ReadPosRankSum=-2.901;VQSLOD=3.6049;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:50.40:0,50,1371	0/0:4,0:4:9.02:0,9,198	0/0:25,0:24:28.13:0,28,1418	0/0:24,0:25:63.49:0,63,1739	0/0:10,0:10:30.09:0,30,805	0/0:16,0:15:42.14:0,42,1201	0/0:17,0:17:48.16:0,48,1378	1/1:0,20:20:60.19:1204,60,0	0/0:5,0:5:15.05:0,15,432	0/0:21,0:21:63.22:0,63,1816	0/0:18,0:18:54.19:0,54,1500	0/0:9,0:9:27.08:0,27,698	0/0:11,0:11:30.10:0,30,853	0/0:4,0:4:12.04:0,12,348	0/0:9,0:9:12.04:0,12,309	0/0:11,0:11:30.09:0,30,705	0/0:18,0:18:45.12:0,45,1146	0/0:13,0:13:39.13:0,39,1020	0/0:16,0:16:48.16:0,48,1305	0/0:8,0:8:21.07:0,21,608	0/0:16,0:16:39.05:0,39,1127	0/0:6,0:6:18.06:0,18,521	0/0:7,0:7:21.07:0,21,608	0/0:11,0:11:33.11:0,33,853	0/0:8,0:8:24.08:0,24,694	0/0:18,0:18:51.17:0,51,1444	0/0:15,0:15:45.15:0,45,1244	1/1:0,5:5:15.05:313,15,0
chr10	95896785	.	C	CT	969.13	PASS	AB=0.913;AC=29;AF=0.518;AN=56;BaseQRankSum=5.809;DP=322;FS=0.765;HRun=10;HaplotypeScore=45.8085;InbreedingCoeff=0.6133;MQ=50.92;MQ0=23;MQRankSum=-6.882;QD=5.27;ReadPosRankSum=-3.818;VQSLOD=-0.4427;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,4:8:8.96:75,9,0	0/1:2,0:2:0:0,0,0	0/1:29,0:7:6.95:7,0,16	0/0:15,0:5:1.77:0,2,5	1/1:7,4:8:3.01:32,3,0	0/0:20,0:19:38.90:0,39,320	0/0:13,0:10:20.95:0,21,172	1/1:12,0:10:7.98:32,8,0	1/1:1,6:5:9.02:96,9,0	0/0:10,0:10:17.95:0,18,148	0/0:15,0:14:26.95:0,27,222	0/0:14,0:13:35:0,35,277	0/0:12,0:11:17.94:0,18,147	0/0:7,0:6:11.98:0,12,98	1/1:4,10:14:12.91:115,13,0	1/1:3,4:6:5.95:50,6,0	1/1:11,3:12:14.87:109,15,0	1/1:7,0:6:5.29:21,5,0	0/1:12,7:15:0.58:200,0,1	0/1:8,2:9:37.21:52,0,37	1/1:4,3:4:0.47:1,0,0	0/0:7,0:7:17.97:0,18,147	0/0:7,0:9:11.98:0,12,98	0/0:15,0:15:32.95:0,33,271	1/1:4,3:5:8.76:76,9,0	1/1:3,8:9:21.05:223,21,0	1/1:3,2:5:5.76:64,6,0	0/1:10,0:10:0:1,0,0
chr10	95896873	.	C	CT	3731.50	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-3.987;DP=297;FS=0.557;HRun=9;HaplotypeScore=45.6825;InbreedingCoeff=0.8617;MQ=75.29;MQ0=14;MQRankSum=-4.353;QD=21.95;ReadPosRankSum=1.310;VQSLOD=4.1110;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,10:14:30:301,30,0	1/1:0,2:2:6.02:66,6,0	0/0:17,0:11:12.64:0,13,102	0/0:22,1:12:1.21:0,1,53	1/1:5,8:12:22.61:236,23,0	0/0:11,0:11:26.19:0,26,198	0/0:17,0:16:41.58:0,42,379	1/1:3,12:11:30.08:329,30,0	1/1:2,3:4:9.02:100,9,0	0/0:13,0:14:32.02:0,32,264	0/0:8,0:7:5.97:0,6,52	0/0:6,0:6:14.99:0,15,130	0/0:6,0:6:11.99:0,12,104	0/0:4,0:4:6:0,6,52	1/1:3,7:10:24.06:265,24,0	1/1:2,9:10:21.02:220,21,0	1/1:6,10:13:30.08:330,30,0	1/1:2,12:11:30.08:332,30,0	1/1:2,4:6:12.03:133,12,0	1/1:2,3:3:9.02:100,9,0	1/1:1,6:6:12.03:133,12,0	0/0:3,0:3:5.99:0,6,52	0/0:8,0:8:14.66:0,15,129	0/0:7,0:7:11.97:0,12,99	1/1:4,4:8:20.90:202,21,0	1/1:10,10:18:16.02:391,16,0	1/1:0,18:18:36.10:396,36,0	1/1:0,6:6:18.05:199,18,0
chr10	95896900	.	C	CT	910.70	PASS	AB=0.738;AC=22;AF=0.393;AN=56;BaseQRankSum=-4.293;DP=289;FS=0.000;HRun=15;HaplotypeScore=47.0366;InbreedingCoeff=0.3820;MQ=70.97;MQ0=22;MQRankSum=1.950;QD=6.32;ReadPosRankSum=-0.790;VQSLOD=1.6431;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,1:12:17.67:129,18,0	0/0:3,0:3:5.68:0,6,30	0/0:19,0:9:2.51:0,3,10	0/0:25,0:11:0.41:0,0,1	0/0:9,0:7:13.74:0,14,77	1/1:3,11:14:4.32:124,4,0	0/1:5,5:10:0.15:97,0,0	0/0:11,0:9:4.08:0,4,18	0/0:5,0:6:13.81:0,14,78	0/1:9,6:14:29.15:100,0,29	1/1:3,6:8:8.43:89,8,0	1/1:2,5:9:2.82:122,3,0	1/1:4,6:9:14.98:126,15,0	0/1:2,0:1:0:0,0,0	0/0:8,0:7:8.74:0,9,54	0/0:7,0:6:7.60:0,8,41	0/1:4,9:11:16.34:16,0,27	1/1:11,6:11:8.99:75,9,0	0/0:9,1:7:6.94:0,7,30	0/0:4,0:4:2.93:0,3,18	0/0:8,0:7:5.83:0,6,34	1/1:2,0:2:3:25,3,0	0/1:2,4:5:5.35:64,0,5	1/1:2,6:8:8.99:76,9,0	0/0:7,0:8:12.62:0,13,65	0/0:17,1:18:12.92:0,13,188	0/1:11,2:12:35.64:36,0,39	0/0:5,0:5:4.03:0,4,13
chr10	95897153	.	C	CT	2550.98	PASS	AB=0.571;AC=29;AF=0.537;AN=54;BaseQRankSum=1.516;DP=303;FS=14.879;HRun=12;HaplotypeScore=40.8744;InbreedingCoeff=0.7322;MQ=57.04;MQ0=5;MQRankSum=-1.287;QD=12.88;ReadPosRankSum=1.633;VQSLOD=1.8037;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:30:41.03:546,41,0	1/1:0,1:1:3:29,3,0	0/0:7,0:7:5.77:0,6,35	0/0:5,0:5:7.94:0,8,45	1/1:2,10:12:18.03:175,18,0	0/0:12,0:12:7.41:0,7,156	0/0:20,1:25:32.58:0,33,361	1/1:10,0:8:2.98:21,3,0	1/1:3,5:8:12.49:118,12,0	0/0:7,0:9:12.80:0,13,68	0/0:5,0:5:5.94:0,6,44	0/0:7,0:6:14.91:0,15,109	0/0:5,0:5:8.95:0,9,65	0/0:8,0:6:14.91:0,15,109	1/1:3,11:15:26.87:244,27,0	1/1:1,6:7:6.48:59,6,0	1/1:4,29:32:50.97:495,51,0	1/1:6,9:16:24.35:219,24,0	1/1:6,11:16:24.04:233,24,0	0/1:2,5:7:6.68:92,0,7	1/1:1,10:11:12.49:117,12,0	0/0:1,0:1:2.98:0,3,22	0/0:3,0:2:2.98:0,3,22	0/0:16,0:16:29.82:0,30,219	1/1:0,4:4:9.01:88,9,0	1/1:5,8:12:23.70:195,24,0	1/1:2,10:12:11.84:116,12,0	./.
chr10	95897226	.	C	CT	768.44	PASS	AB=0.939;AC=31;AF=0.705;AN=44;BaseQRankSum=0.447;DP=241;FS=3.907;HRun=17;HaplotypeScore=42.4004;InbreedingCoeff=0.2577;MQ=43.54;MQ0=19;MQRankSum=-0.924;QD=4.52;ReadPosRankSum=-2.772;VQSLOD=0.3449;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,1:20:31.22:183,31,0	./.	./.	0/0:24,0:5:2.72:0,3,15	1/1:6,0:5:2.96:19,3,0	1/1:9,0:12:17.15:89,17,0	1/1:6,0:5:9.61:51,10,0	0/1:5,0:3:0:0,0,0	./.	1/1:6,0:5:2.90:16,3,0	./.	1/1:3,0:3:3.81:19,4,0	./.	1/1:2,0:2:2.60:10,3,0	1/1:6,2:7:9.84:69,10,0	0/1:6,1:7:9.55:17,0,10	1/1:20,1:24:29.25:162,29,0	1/1:13,0:12:20.26:102,20,0	1/1:15,2:11:1.70:69,2,0	0/1:6,1:5:0:0,0,0	0/0:0,1:2:2.04:0,2,6	0/1:2,0:1:0:0,0,0	./.	0/1:2,0:2:0:0,0,0	0/1:8,1:7:9.56:17,0,10	0/1:11,1:10:3.63:50,0,4	1/1:3,0:3:0.89:2,1,0	0/0:2,0:4:2.04:0,2,6
chr10	95897473	.	CT	C	906.33	PASS	AB=0.725;AC=21;AF=0.389;AN=54;BaseQRankSum=-2.340;DP=423;FS=0.000;HRun=16;HaplotypeScore=77.4080;InbreedingCoeff=0.5584;MQ=61.71;MQ0=7;MQRankSum=2.904;QD=4.05;ReadPosRankSum=1.924;VQSLOD=0.8537;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,7:30:2.72:3,0,263	0/1:3,3:7:15.83:16,0,18	0/0:10,0:5:8.55:0,9,52	0/0:14,0:11:0.49:0,0,4	1/1:6,7:15:13.57:77,14,0	0/0:14,0:20:25.16:0,25,152	0/0:11,1:22:22.35:0,22,187	0/0:9,0:7:0:0,0,0	1/1:4,10:14:17.51:107,18,0	0/0:6,0:11:22.75:0,23,125	0/0:5,0:9:11.42:0,11,59	0/0:8,0:16:22.53:0,23,125	0/0:8,1:10:12.12:0,12,74	0/0:9,0:14:18.87:0,19,120	0/1:7,15:26:8.36:118,0,8	1/1:15,4:21:11.06:148,11,0	0/1:22,1:25:8.59:9,0,158	0/0:16,0:15:29.95:0,30,248	1/1:6,6:17:21.95:157,22,0	1/1:3,5:8:11.55:72,12,0	0/1:8,7:16:7.91:61,0,8	0/0:8,1:13:13.82:0,14,149	0/0:3,0:8:17.83:0,18,108	0/0:16,0:20:26.34:0,26,177	1/1:7,4:11:5.74:36,6,0	1/1:7,12:20:12.09:177,12,0	1/1:5,6:11:19.43:113,19,0	./.
chr10	95897841	.	C	CGGT	2442.01	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.073;DP=731;FS=10.352;HRun=0;HaplotypeScore=100.4468;InbreedingCoeff=0.9958;MQ=79.23;MQ0=0;MQRankSum=-7.423;QD=62.62;ReadPosRankSum=-3.806;VQSLOD=3.6729;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,2001	0/0:14,0:14:42.14:0,42,783	0/0:22,0:22:63.21:0,63,1079	0/0:22,0:22:63.22:0,63,1152	0/0:29,0:29:81.26:0,81,1479	0/0:16,0:16:45.15:0,45,839	0/0:32,0:32:96.32:0,96,1759	1/1:7,24:33:93.27:2120,93,0	0/0:27,0:27:81.28:0,81,1510	0/0:40,0:40:99:0,120,2203	0/0:23,0:23:66.23:0,66,1231	0/0:32,0:32:96.32:0,96,1759	0/0:22,0:22:66.23:0,66,1230	0/0:24,0:24:72.25:0,72,1314	0/0:53,0:53:99:0,157,2847	0/0:28,0:28:81.28:0,81,1510	0/0:32,0:32:96.30:0,96,1755	0/0:13,0:13:36.12:0,36,671	0/0:27,0:27:81.26:0,81,1439	0/0:20,0:20:60.15:0,60,1051	0/0:22,0:22:63.22:0,63,1175	0/0:21,0:21:63.22:0,63,1174	0/0:19,0:19:57.18:0,57,1031	0/0:26,0:26:78.27:0,78,1446	0/0:27,0:27:81.28:0,81,1510	0/0:35,0:35:99:0,102,1858	0/0:28,0:28:84.29:0,84,1554	1/1:0,6:6:18.06:442,18,0
chr10	95898150	.	T	TG	7463.58	PASS	AB=0.885;AC=21;AF=0.375;AN=56;BaseQRankSum=-14.422;DP=680;FS=13.785;HRun=5;HaplotypeScore=67.7902;InbreedingCoeff=0.9223;MQ=93.74;MQ0=0;MQRankSum=-2.733;QD=29.62;ReadPosRankSum=2.902;VQSLOD=4.2641;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:87.22:0,87,935	0/0:9,0:9:27.02:0,27,269	0/0:34,0:34:78.17:0,78,818	0/0:26,0:26:57.13:0,57,597	0/0:23,0:23:63.13:0,63,666	1/1:3,22:25:60.20:790,60,0	1/1:2,26:28:72.23:947,72,0	0/0:26,0:26:54.13:0,54,580	0/0:24,0:24:60.12:0,60,634	1/1:6,20:26:60.20:790,60,0	1/1:4,18:22:42.14:552,42,0	1/1:1,24:25:72.23:947,72,0	1/1:2,29:31:78.25:1022,78,0	1/1:2,22:24:60.19:788,60,0	0/0:40,0:40:99:0,111,1193	0/0:41,0:41:99:0,117,1249	0/0:26,0:26:66.14:0,66,700	0/0:21,0:21:57.14:0,57,613	0/0:16,0:16:39.04:0,39,398	0/0:17,0:17:41.96:0,42,451	0/0:33,0:33:90.21:0,90,958	1/1:1,10:11:27.09:355,27,0	1/1:0,12:12:30.10:395,30,0	1/1:2,23:25:63.20:828,63,0	0/0:20,0:20:60.12:0,60,628	0/1:20,3:23:49.27:49,0,564	0/0:27,0:27:75.19:0,75,806	0/0:11,0:11:18.04:0,18,193
chr10	95898388	.	TA	T	1510.54	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.877;DP=696;FS=14.565;HRun=5;HaplotypeScore=65.2436;InbreedingCoeff=0.9989;MQ=77.89;MQ0=0;MQRankSum=-0.147;QD=27.46;ReadPosRankSum=-1.801;VQSLOD=1.8025;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1460	0/0:9,0:9:27.09:0,27,369	0/0:21,0:21:58.72:0,59,737	0/0:10,0:10:27.09:0,27,354	0/0:30,0:30:81.27:0,81,1097	0/0:21,0:21:60.19:0,60,806	0/0:20,0:20:57.17:0,57,747	1/1:3,34:37:99:1156,102,0	0/0:26,0:26:72.21:0,72,951	0/0:41,0:41:99:0,114,1546	0/0:25,0:25:75.24:0,75,1009	0/0:19,0:19:48.16:0,48,656	0/0:20,0:20:57.14:0,57,718	0/0:29,0:29:78.25:0,78,1050	0/0:27,0:27:81.24:0,81,1075	0/0:29,0:29:87.27:0,87,1170	0/0:24,0:24:69.20:0,69,924	0/0:23,0:23:60.20:0,60,820	0/0:27,0:27:72.23:0,72,966	0/0:20,0:20:60.20:0,60,820	0/0:30,0:30:78.25:0,78,1047	0/0:20,0:20:60.17:0,60,788	0/0:13,0:13:39.13:0,39,533	0/0:27,0:27:81.26:0,81,1091	0/0:28,0:28:81.20:0,81,1084	0/0:31,0:31:93.30:0,93,1258	0/0:35,0:35:87.26:0,87,1157	1/1:0,18:18:42.12:476,42,0
chr10	95898561	.	A	AC	1346.60	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.067;DP=697;FS=8.344;HRun=0;HaplotypeScore=71.1330;InbreedingCoeff=0.9987;MQ=86.67;MQ0=0;MQRankSum=-3.801;QD=38.47;ReadPosRankSum=-0.198;VQSLOD=3.4426;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.19:0,75,1010	0/0:9,0:9:24.08:0,24,335	0/0:29,0:29:76.99:0,77,1119	0/0:18,0:18:50.99:0,51,663	0/0:24,0:24:69.23:0,69,960	0/0:23,0:23:69.22:0,69,945	0/0:23,0:23:69.23:0,69,960	1/1:3,22:25:62.94:989,63,0	0/0:20,0:20:60.20:0,60,838	0/0:28,0:28:84.27:0,84,1161	0/0:21,0:21:63.21:0,63,879	0/0:23,0:23:69.22:0,69,948	0/0:24,0:24:72.23:0,72,990	0/0:33,0:33:99:0,99,1385	0/0:38,0:38:99:0,114,1595	0/0:27,0:27:81.26:0,81,1115	0/0:31,0:31:93.31:0,93,1301	0/0:16,0:16:48.16:0,48,671	0/0:33,0:33:99:0,99,1342	0/0:18,0:18:54.18:0,54,755	0/0:38,0:38:99:0,111,1552	0/0:16,0:16:48.16:0,48,671	0/0:17,0:17:51.16:0,51,696	0/0:34,0:34:99:0,102,1386	0/0:17,0:17:51.17:0,51,713	0/0:33,0:33:99:0,99,1384	0/0:44,0:44:99:0,126,1744	1/1:0,10:10:30.10:479,30,0
chr10	95899397	.	C	CGTTT	1418.32	PASS	AB=0.769;AC=3;AF=0.054;AN=56;BaseQRankSum=0.481;DP=619;FS=4.120;HRun=0;HaplotypeScore=110.1962;InbreedingCoeff=0.6373;MQ=71.56;MQ0=0;MQRankSum=-3.091;QD=30.83;ReadPosRankSum=-1.064;VQSLOD=3.4708;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,120,1912	0/0:6,0:6:18.06:0,18,304	0/0:20,0:19:27.05:0,27,364	0/0:19,0:19:36.12:0,36,582	0/0:29,0:29:81.23:0,81,1313	0/0:18,0:18:45.03:0,45,668	0/0:33,0:33:57.18:0,57,937	0/1:21,6:30:23.29:483,0,23	0/0:26,0:26:60.16:0,60,976	0/0:31,0:31:84.28:0,84,1372	0/0:14,0:14:33.11:0,33,557	0/0:27,0:28:66.22:0,66,1089	0/0:20,0:20:54.17:0,54,886	0/0:13,0:13:36.12:0,36,597	0/0:25,0:25:66.15:0,66,1054	0/0:25,0:25:63.22:0,63,1060	0/0:35,0:35:87.24:0,87,1376	0/0:24,0:24:45.15:0,45,759	0/0:29,0:29:60.16:0,60,913	0/0:17,0:17:39.12:0,39,630	0/0:25,0:26:57.19:0,57,937	0/0:13,0:13:26.90:0,27,455	0/0:10,0:10:27.08:0,27,421	0/0:25,0:25:54.18:0,54,911	0/0:7,0:7:15.05:0,15,242	0/0:21,0:21:51.13:0,51,830	0/0:13,0:13:36.12:0,36,608	1/1:2,14:16:42.14:1042,42,0
chr10	95899517	.	GTTTTTT	G	7147.02	PASS	AB=0.590;AC=24;AF=0.429;AN=56;BaseQRankSum=6.561;DP=657;FS=1.253;HRun=18;HaplotypeScore=150.5584;InbreedingCoeff=0.8198;MQ=68.25;MQ0=9;MQRankSum=-10.649;QD=22.91;ReadPosRankSum=6.248;VQSLOD=0.7937;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:30:51.05:588,51,0	0/0:7,0:11:27.02:0,27,519	0/0:59,0:23:38.67:0,39,479	0/0:36,0:17:8.92:0,9,143	0/0:26,0:30:62.99:0,63,1408	1/1:5,14:21:51.88:770,52,0	1/1:7,15:23:32.71:508,33,0	0/0:23,0:23:39.45:0,39,731	0/0:14,0:15:26.27:0,26,514	1/1:10,26:40:67.42:1144,67,0	1/1:8,8:17:24.35:400,24,0	1/1:11,22:33:25.15:886,25,0	1/1:2,14:19:26.94:409,27,0	1/1:5,8:13:3.06:236,3,0	0/0:18,0:25:38.30:0,38,873	0/0:15,0:18:39.09:0,39,798	0/1:11,0:32:0.03:281,0,0	0/1:5,0:19:42.60:124,0,43	0/0:15,0:14:33.02:0,33,746	0/0:23,0:27:48.61:0,49,1080	0/0:15,0:16:27.07:0,27,585	1/1:3,18:22:50.91:826,51,0	1/1:6,15:24:3.47:501,3,0	1/1:3,16:19:29.61:474,30,0	0/0:11,0:23:30.10:0,30,664	0/0:21,0:21:51.16:0,51,1229	0/0:18,0:20:51.11:0,51,1149	0/0:4,0:3:6.02:0,6,139
chr10	95899524	.	T	TTTG	458.60	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.718;DP=627;FS=5.387;HRun=0;HaplotypeScore=143.4850;InbreedingCoeff=0.9209;MQ=63.62;MQ0=12;MQRankSum=-0.077;QD=20.85;ReadPosRankSum=-1.932;VQSLOD=2.9996;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:41.57:0,42,541	0/0:10,0:10:24.33:0,24,228	0/0:66,0:20:24.04:0,24,257	0/0:42,0:15:14.45:0,14,126	0/0:28,0:28:67.45:0,67,661	0/0:20,0:20:56.30:0,56,568	0/0:20,0:20:36.02:0,36,371	1/1:1,16:18:51.05:518,51,0	0/0:14,0:14:28.65:0,29,297	0/0:36,0:36:99:0,102,998	0/0:16,0:16:41.80:0,42,387	0/0:31,0:31:66.76:0,67,675	0/0:20,0:20:30.06:0,30,309	0/0:12,0:12:23.93:0,24,228	0/0:20,0:20:44.74:0,45,511	0/0:17,0:17:38.85:0,39,396	0/0:25,0:25:38.19:0,38,356	0/0:17,0:17:15.04:0,15,167	0/0:14,0:13:34.29:0,34,399	0/0:28,0:28:70.90:0,71,722	0/0:13,0:13:37.47:0,37,348	0/0:21,0:21:60.04:0,60,601	0/0:23,0:23:41.20:0,41,418	0/0:18,0:18:30.03:0,30,313	0/0:22,0:22:26.43:0,26,281	0/0:21,0:21:58.53:0,59,617	0/0:21,0:20:54.01:0,54,637	1/1:2,0:3:5.96:52,6,0
chr10	95899530	.	TTTTTTC	T	4565.29	PASS	AB=0.996;AC=19;AF=0.339;AN=56;BaseQRankSum=10.881;DP=627;FS=28.249;HRun=0;HaplotypeScore=147.8312;InbreedingCoeff=0.1286;MQ=62.79;MQ0=12;MQRankSum=-12.254;QD=13.27;ReadPosRankSum=9.453;VQSLOD=2.1309;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:3.24:397,0,3	0/0:9,0:9:19.19:0,19,395	0/0:69,0:22:1.99:0,2,375	0/1:44,0:17:1.10:1,0,158	0/0:24,0:24:50.23:0,50,1024	1/1:19,2:21:10.03:517,10,0	0/1:19,1:20:35.25:337,0,35	0/0:22,0:22:51.03:0,51,808	0/1:12,0:12:2.04:2,0,344	0/1:35,0:35:13.72:550,0,14	0/1:15,0:15:38.04:251,0,38	1/1:28,4:32:30.87:682,31,0	0/1:19,0:19:12.76:244,0,13	1/1:10,1:11:0.39:179,0,0	0/0:23,0:23:37.08:0,37,942	0/0:19,0:19:44.12:0,44,755	0/1:25,0:25:39:194,0,39	0/1:18,0:18:49.85:77,0,50	0/0:15,0:14:35.88:0,36,675	0/0:24,0:24:25.26:0,25,968	0/0:9,0:9:26.49:0,26,437	1/1:20,0:20:29.82:537,30,0	0/1:22,0:22:27.61:324,0,28	0/1:18,0:18:10.48:274,0,10	0/0:23,0:23:32.54:0,33,585	0/0:21,0:21:54.07:0,54,1091	0/0:21,0:20:47.98:0,48,946	0/0:4,0:3:6.02:0,6,152
chr10	95900245	.	GT	G	4044.59	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=15.389;DP=731;FS=0.381;HRun=2;HaplotypeScore=78.9078;InbreedingCoeff=0.9998;MQ=89.38;MQ0=0;MQRankSum=-1.313;QD=36.77;ReadPosRankSum=3.180;VQSLOD=4.2728;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,45:45:99:1592,123,0	0/0:15,0:15:42.13:0,42,610	0/0:30,0:30:71.07:0,71,1035	0/0:27,0:27:75.22:0,75,1037	0/0:23,0:23:66.21:0,66,968	0/0:20,0:20:60.20:0,60,888	0/0:24,0:24:72.23:0,72,1058	0/0:34,0:34:96.31:0,96,1402	0/0:25,0:25:75.25:0,75,1122	0/0:31,0:31:87.29:0,87,1304	0/0:12,0:12:33.11:0,33,493	0/0:32,0:32:96.33:0,96,1435	0/0:27,0:27:81.27:0,81,1208	0/0:29,0:29:81.26:0,81,1193	0/0:34,0:34:99:0,102,1508	0/0:22,0:22:63.20:0,63,918	1/1:0,35:35:99:1285,99,0	1/1:0,30:30:90.29:1168,90,0	0/0:20,0:19:57.17:0,57,825	0/0:25,0:25:72.20:0,72,1016	0/0:36,0:36:99:0,102,1526	0/0:24,0:24:72.24:0,72,1072	0/0:25,0:25:75.25:0,75,1124	0/0:26,0:26:78.26:0,78,1169	0/0:13,0:13:39.13:0,39,582	0/0:19,0:19:57.19:0,57,854	0/0:36,0:36:99:0,108,1574	0/0:12,0:12:36.12:0,36,539
chr10	95900518	.	C	CAAAT	1761.92	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.792;DP=516;FS=3.366;HRun=0;HaplotypeScore=93.8481;InbreedingCoeff=0.8811;MQ=65.44;MQ0=0;MQRankSum=-3.235;QD=40.04;ReadPosRankSum=-5.487;VQSLOD=2.6037;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.31:0,90,1531	0/0:10,0:10:21.06:0,21,338	0/0:12,0:11:12.04:0,12,206	0/0:16,0:16:25.43:0,25,519	0/0:24,0:24:57.19:0,57,968	0/0:13,0:12:39.12:0,39,650	0/0:17,0:17:36.12:0,36,621	1/1:9,25:36:84.26:1795,84,0	0/0:19,0:19:39.11:0,39,637	0/0:27,0:27:69.24:0,69,1193	0/0:18,0:18:45.14:0,45,727	0/0:13,0:13:30.10:0,30,504	0/0:7,0:7:21.07:0,21,354	0/0:16,0:16:30.10:0,30,506	0/0:16,0:16:36.12:0,36,621	0/0:15,0:15:36.11:0,36,570	0/0:13,0:13:30.10:0,30,522	0/0:22,0:22:51.16:0,51,853	0/0:21,0:21:54.17:0,54,879	0/0:20,0:20:54.18:0,54,910	0/0:13,0:13:30.10:0,30,510	0/0:17,0:17:48.14:0,48,752	0/0:17,0:17:33.08:0,33,479	0/0:17,0:17:42.14:0,42,717	0/0:22,0:22:57.19:0,57,971	0/0:25,0:25:66.22:0,66,1122	0/0:28,0:27:60.19:0,60,955	1/1:2,6:8:3.01:76,3,0
chr10	95900874	.	T	TCTTC	2563.48	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.091;DP=607;FS=1.403;HRun=0;HaplotypeScore=99.7819;InbreedingCoeff=0.9989;MQ=84.62;MQ0=0;MQRankSum=-4.310;QD=65.73;ReadPosRankSum=-0.840;VQSLOD=5.5520;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.27:0,90,1676	0/0:8,0:8:24.08:0,24,454	0/0:21,0:21:60.21:0,60,1139	0/0:25,0:25:66.23:0,66,1203	0/0:17,0:17:48.16:0,48,930	0/0:24,0:24:69.24:0,69,1337	0/0:16,0:16:48.16:0,48,930	1/1:5,13:20:60.17:1453,60,0	0/0:16,0:16:42.14:0,42,814	0/0:26,0:26:72.24:0,72,1361	0/0:22,0:22:60.21:0,60,1162	0/0:19,0:19:57.18:0,57,1070	0/0:25,0:25:72.25:0,72,1374	0/0:30,0:30:81.26:0,81,1535	0/0:29,0:29:84.29:0,84,1628	0/0:21,0:21:63.22:0,63,1220	0/0:32,0:32:90.29:0,90,1709	0/0:17,0:17:48.16:0,48,930	0/0:17,0:17:42.12:0,42,778	0/0:17,0:17:45.15:0,45,872	0/0:32,0:32:93.32:0,93,1782	0/0:15,0:15:45.15:0,45,872	0/0:17,0:17:51.16:0,51,955	0/0:25,0:25:69.24:0,69,1338	0/0:21,0:21:60.14:0,60,1044	0/0:26,0:25:78.27:0,78,1503	0/0:19,0:19:57.18:0,57,1071	1/1:0,18:18:45.15:1232,45,0
chr10	95900955	.	GT	G	1183.81	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.332;DP=632;FS=9.317;HRun=3;HaplotypeScore=63.9653;InbreedingCoeff=0.9814;MQ=76.99;MQ0=0;MQRankSum=-2.947;QD=29.60;ReadPosRankSum=-3.928;VQSLOD=1.2176;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,1896	0/0:10,0:10:30.10:0,30,431	0/0:17,0:17:44.86:0,45,578	0/0:11,0:11:21:0,21,259	0/0:22,0:22:60.20:0,60,864	0/0:25,0:25:72.24:0,72,1029	0/0:26,0:26:78.25:0,78,1104	1/1:3,30:33:93.29:1152,93,0	0/0:24,0:24:66.22:0,66,950	0/0:17,0:17:51.17:0,51,734	0/0:17,0:17:48.15:0,48,664	0/0:18,0:18:54.18:0,54,778	0/0:20,0:20:57.19:0,57,817	0/0:31,0:31:93.31:0,93,1335	0/0:36,0:35:99:0,105,1495	0/0:23,0:23:69.22:0,69,977	0/0:31,0:31:90.30:0,90,1296	0/0:19,0:18:54.14:0,54,754	0/0:21,0:21:63.21:0,63,903	0/0:17,0:17:48.16:0,48,688	0/0:33,0:33:96.31:0,96,1364	0/0:12,0:12:36.12:0,36,515	0/0:14,0:13:36.11:0,36,501	0/0:18,0:18:54.18:0,54,773	0/0:31,0:31:87.29:0,87,1252	0/0:29,0:29:84.28:0,84,1200	0/0:26,0:26:78.26:0,78,1123	1/1:3,4:7:12.04:149,12,0
chr10	95900980	.	T	TGA	2230.98	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.964;DP=666;FS=9.368;HRun=0;HaplotypeScore=80.0639;InbreedingCoeff=0.9977;MQ=87.70;MQ0=0;MQRankSum=-5.621;QD=48.50;ReadPosRankSum=-3.528;VQSLOD=2.9426;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,1867	0/0:8,0:8:24.08:0,24,353	0/0:30,0:30:71.21:0,71,1086	0/0:18,0:18:51.17:0,51,741	0/0:25,0:25:69.23:0,69,1012	0/0:26,0:26:78.25:0,78,1128	0/0:29,0:29:84.27:0,84,1216	1/1:5,30:37:99:1903,105,0	0/0:20,0:20:60.19:0,60,864	0/0:25,0:25:69.21:0,69,967	0/0:18,0:18:51.16:0,51,720	0/0:24,0:24:72.22:0,72,1022	0/0:19,0:19:54.17:0,54,775	0/0:30,0:30:87.29:0,87,1281	0/0:34,0:33:99:0,102,1443	0/0:25,0:25:75.24:0,75,1084	0/0:28,0:28:84.28:0,84,1235	0/0:21,0:20:60.18:0,60,861	0/0:21,0:21:57.17:0,57,790	0/0:15,0:15:45.15:0,45,660	0/0:35,0:35:96.27:0,96,1352	0/0:12,0:12:33.11:0,33,486	0/0:14,0:13:36.11:0,36,510	0/0:19,0:19:57.18:0,57,819	0/0:25,0:25:72.21:0,72,1020	0/0:26,0:26:78.25:0,78,1129	0/0:28,0:28:84.28:0,84,1236	1/1:1,8:9:24.08:449,24,0
chr10	95901320	.	A	AC	1840.37	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.939;DP=707;FS=2.004;HRun=0;HaplotypeScore=72.6799;InbreedingCoeff=0.9988;MQ=86.89;MQ0=0;MQRankSum=-1.232;QD=40.01;ReadPosRankSum=-2.704;VQSLOD=3.0917;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,150,2078	0/0:11,0:11:33.10:0,33,444	0/0:26,0:26:72.20:0,72,940	0/0:23,0:23:69.19:0,69,912	0/0:16,0:16:42.14:0,42,586	0/0:18,0:18:54.18:0,54,754	0/0:39,0:39:99:0,114,1524	1/1:0,35:35:99:1560,102,0	0/0:29,0:29:87.27:0,87,1198	0/0:26,0:26:78.25:0,78,1076	0/0:11,0:11:30.09:0,30,402	0/0:27,0:27:81.27:0,81,1127	0/0:31,0:31:93.31:0,93,1299	0/0:30,0:30:87.29:0,87,1207	0/0:41,0:41:99:0,120,1676	0/0:16,0:16:48.16:0,48,671	0/0:30,0:30:90.30:0,90,1258	0/0:19,0:19:54.14:0,54,716	0/0:18,0:18:54.14:0,54,718	0/0:12,0:12:33.08:0,33,427	0/0:53,0:53:99:0,156,2129	0/0:15,0:15:45.15:0,45,617	0/0:11,0:11:33.11:0,33,460	0/0:35,0:35:99:0,105,1447	0/0:21,0:21:54.17:0,54,737	0/0:19,0:19:57.19:0,57,797	0/0:34,0:33:99:0,102,1408	1/1:0,11:11:27.02:401,27,0
chr10	95902232	.	AAAACAAAAAACAAAAAAAC	A	1898.76	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.113;DP=593;FS=2.315;HRun=0;HaplotypeScore=291.1009;InbreedingCoeff=0.9492;MQ=62.52;MQ0=13;MQRankSum=-1.783;QD=51.32;ReadPosRankSum=-0.889;VQSLOD=2.8334;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:54:99:0,162,10497	0/0:3,0:3:9.03:0,9,569	0/0:69,0:17:31.96:0,32,887	0/0:48,0:20:46.21:0,46,1320	0/0:19,0:19:57.20:0,57,4393	0/0:16,0:16:42.13:0,42,2520	0/0:10,0:10:24.08:0,24,1396	1/1:1,29:30:83.71:1383,84,0	0/0:21,0:21:63.21:0,63,5063	0/0:14,0:14:36.12:0,36,1370	0/0:11,0:11:24.08:0,24,1234	0/0:10,0:10:24.08:0,24,1086	0/0:12,0:12:36.12:0,36,2002	0/0:18,0:18:37:0,37,1788	0/0:26,0:26:78.27:0,78,6295	0/0:20,0:20:60.19:0,60,3896	0/0:36,0:36:99:0,108,7496	0/0:16,0:16:45.15:0,45,3323	0/0:18,0:17:51.16:0,51,2861	0/0:17,0:17:51.17:0,51,3818	0/0:20,0:20:60.21:0,60,4842	0/0:8,0:7:21.07:0,21,1013	0/0:14,0:14:36.12:0,36,1547	0/0:16,0:16:31:0,31,1258	0/0:13,0:13:39.13:0,39,2831	0/0:23,0:22:66.23:0,66,4832	0/0:23,0:21:66.23:0,66,5601	1/1:0,7:7:12.04:632,12,0
chr10	95902243	.	C	CA	1967.41	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=5.904;DP=589;FS=1.543;HRun=7;HaplotypeScore=109.3002;InbreedingCoeff=0.8361;MQ=68.13;MQ0=14;MQRankSum=-5.435;QD=8.86;ReadPosRankSum=-4.211;VQSLOD=0.8689;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:99:0,120,1103	0/0:3,0:3:9.01:0,9,87	0/1:65,0:17:13.22:13,0,145	0/0:53,0:27:34.15:0,34,290	0/0:20,0:20:60.08:0,60,573	1/1:14,4:18:30.76:372,31,0	1/1:3,8:11:20.74:204,21,0	0/1:30,0:30:9.65:10,0,16	0/0:20,0:20:60.10:0,60,579	1/1:7,7:14:18.52:207,19,0	1/1:3,6:9:18.70:173,19,0	1/1:1,8:9:17.94:172,18,0	1/1:7,7:14:20.49:226,20,0	1/1:1,15:16:28.31:302,28,0	0/0:26,0:26:72.10:0,72,689	0/0:17,0:17:48.08:0,48,463	0/0:33,0:33:90.07:0,90,838	0/0:16,0:16:42.06:0,42,406	0/0:23,0:22:50.64:0,51,463	0/0:15,0:15:44.55:0,45,410	0/0:25,0:25:72.08:0,72,682	1/1:5,3:7:17.86:165,18,0	1/1:6,6:12:14.95:134,15,0	1/1:5,11:16:18.05:206,18,0	0/0:13,0:13:36.04:0,36,341	0/0:26,0:25:39.41:0,39,577	0/0:24,0:22:69.08:0,69,654	0/0:7,0:7:8.88:0,9,28
chr10	95902420	.	AC	A	1207.02	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.697;DP=670;FS=11.229;HRun=1;HaplotypeScore=84.6336;InbreedingCoeff=0.9996;MQ=88.53;MQ0=1;MQRankSum=-1.531;QD=34.49;ReadPosRankSum=-1.411;VQSLOD=2.0053;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,2074	0/0:12,0:12:36.12:0,36,573	0/0:29,0:29:87.27:0,87,1346	0/0:24,0:24:72.22:0,72,1121	0/0:31,0:31:93.32:0,93,1484	0/0:20,0:20:54.16:0,54,838	0/0:28,0:28:78.25:0,78,1219	1/1:0,25:25:69.18:909,69,0	0/0:21,0:21:63.20:0,63,976	0/0:21,0:21:60.20:0,60,956	0/0:16,0:16:45.14:0,45,693	0/0:28,0:28:81.26:0,81,1268	0/0:12,0:12:36.10:0,36,547	0/0:26,0:26:75.26:0,75,1197	0/0:28,0:28:84.26:0,84,1292	0/0:18,0:18:54.18:0,54,861	0/0:31,0:31:90.28:0,90,1391	0/0:30,0:30:90.27:0,90,1381	0/0:16,0:16:48.15:0,48,742	0/0:17,0:17:51.17:0,51,810	0/0:42,0:41:99:0,120,1894	0/0:16,0:16:48.15:0,48,740	0/0:20,0:20:60.20:0,60,941	0/0:30,0:30:90.31:0,90,1428	0/0:20,0:20:60.20:0,60,951	0/0:26,0:26:78.25:0,78,1204	0/0:29,0:29:84.29:0,84,1338	1/1:0,10:10:30.10:419,30,0
chr10	95903077	.	A	AT	1554.85	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.597;DP=672;FS=16.301;HRun=1;HaplotypeScore=72.4221;InbreedingCoeff=0.9969;MQ=90.65;MQ0=0;MQRankSum=-4.128;QD=40.92;ReadPosRankSum=-2.078;VQSLOD=1.5194;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.17:0,51,713	0/0:13,0:13:36.12:0,36,500	0/0:26,0:26:75.20:0,75,974	0/0:26,0:26:72.17:0,72,943	0/0:12,0:12:30.10:0,30,419	0/0:13,0:13:36.12:0,36,503	0/0:38,0:38:99:0,108,1510	1/1:1,24:25:69.24:1101,69,0	0/0:30,0:30:84.28:0,84,1167	0/0:21,0:21:63.21:0,63,879	0/0:8,0:8:21.07:0,21,294	0/0:25,0:25:75.24:0,75,1030	0/0:32,0:32:93.31:0,93,1299	0/0:36,0:36:99:0,108,1507	0/0:37,0:37:99:0,108,1509	0/0:37,0:36:99:0,111,1517	0/0:30,0:30:87.24:0,87,1174	0/0:31,0:31:90.26:0,90,1219	0/0:15,0:15:45.14:0,45,613	0/0:18,0:18:51.16:0,51,694	0/0:42,0:42:99:0,123,1700	0/0:15,0:15:45.15:0,45,627	0/0:10,0:10:27.09:0,27,378	0/0:32,0:32:96.30:0,96,1323	0/0:20,0:20:60.17:0,60,803	0/0:20,0:20:60.20:0,60,837	0/0:29,0:28:87.29:0,87,1213	1/1:0,13:13:36.12:575,36,0
chr10	95904186	.	AG	A	956.59	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.544;DP=650;FS=3.089;HRun=5;HaplotypeScore=63.8113;InbreedingCoeff=0.9431;MQ=88.54;MQ0=0;MQRankSum=-0.696;QD=27.33;ReadPosRankSum=-4.415;VQSLOD=1.5866;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,114,1521	0/0:16,0:16:42.12:0,42,556	0/0:29,0:29:71.36:0,71,949	0/0:18,0:18:33.56:0,34,473	0/0:25,0:25:75.24:0,75,1007	0/0:21,0:21:57.18:0,57,763	0/0:31,0:31:93.27:0,93,1236	1/1:2,31:33:90.22:1000,90,0	0/0:17,0:17:48.16:0,48,655	0/0:24,0:24:72.23:0,72,957	0/0:13,0:13:30.10:0,30,410	0/0:23,0:23:69.23:0,69,938	0/0:19,0:19:51.14:0,51,663	0/0:23,0:23:69.22:0,69,926	0/0:24,0:24:63.20:0,63,846	0/0:30,0:30:87.28:0,87,1175	0/0:26,0:26:72.22:0,72,965	0/0:24,0:24:69.23:0,69,939	0/0:22,0:22:63.20:0,63,845	0/0:22,0:22:60.18:0,60,789	0/0:32,0:32:96.32:0,96,1311	0/0:25,0:25:75.21:0,75,976	0/0:23,0:23:60.12:0,60,779	0/0:18,0:18:48.16:0,48,656	0/0:20,0:20:57.18:0,57,763	0/0:29,0:29:81.27:0,81,1107	0/0:19,0:19:45.15:0,45,614	1/1:0,2:2:6.02:68,6,0
chr10	95904260	.	CTTAAA	C	738.77	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.607;DP=584;FS=3.485;HRun=0;HaplotypeScore=105.7580;InbreedingCoeff=0.8663;MQ=72.63;MQ0=0;MQRankSum=-4.178;QD=41.04;ReadPosRankSum=-2.024;VQSLOD=3.0650;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,147,4794	0/0:10,0:10:30.10:0,30,995	0/0:7,0:7:20.93:0,21,312	0/0:13,0:13:8.20:0,8,633	0/0:15,0:15:45.15:0,45,1494	0/0:12,0:12:36.11:0,36,1124	0/0:28,0:28:84.29:0,84,2648	1/1:3,14:17:39.08:781,39,0	0/0:17,0:17:51.18:0,51,1696	0/0:21,0:22:63.22:0,63,2046	0/0:15,0:15:45.15:0,45,1498	0/0:18,0:18:54.19:0,54,1799	0/0:18,0:18:54.19:0,54,1777	0/0:21,0:21:63.22:0,63,2050	0/0:28,0:28:84.29:0,84,2797	0/0:30,0:30:90.31:0,90,2932	0/0:35,0:35:99:0,105,3438	0/0:32,0:32:96.33:0,96,3120	0/0:18,0:18:54.19:0,54,1791	0/0:21,0:21:63.22:0,63,2069	0/0:16,0:16:48.16:0,48,1571	0/0:28,0:28:84.29:0,84,2744	0/0:13,0:13:39.12:0,39,1222	0/0:28,0:28:84.29:0,84,2763	0/0:16,0:16:48.16:0,48,1552	0/0:31,0:31:90.31:0,90,2994	0/0:25,0:25:75.26:0,75,2486	1/1:0,1:1:3.01:67,3,0
chr10	95905526	.	A	AT	4425.71	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-11.814;DP=652;FS=2.013;HRun=11;HaplotypeScore=71.6788;InbreedingCoeff=0.9892;MQ=75.35;MQ0=0;MQRankSum=1.859;QD=21.28;ReadPosRankSum=0.946;VQSLOD=5.7053;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,134,1022	0/0:15,0:15:35.83:0,36,279	0/0:14,0:13:11.21:0,11,108	0/0:18,0:18:26.36:0,26,193	0/0:34,0:34:86.64:0,87,671	1/1:3,23:27:68.97:684,69,0	1/1:3,17:20:43.17:480,43,0	0/0:5,0:30:48.61:0,49,140	0/0:16,0:16:38.84:0,39,302	1/1:11,23:35:68.09:649,68,0	1/1:1,19:20:48.10:487,48,0	1/1:4,15:19:39.08:396,39,0	1/1:5,9:14:20.91:212,21,0	1/1:3,8:12:14.64:177,15,0	0/0:28,0:29:76.72:0,77,584	0/0:26,0:26:65.70:0,66,505	0/0:32,0:32:80.53:0,81,610	0/0:19,0:19:49.85:0,50,377	0/0:21,0:21:44.39:0,44,324	0/0:29,0:29:43.37:0,43,483	0/0:18,0:18:47.69:0,48,363	1/1:3,18:22:47.81:439,48,0	1/1:2,21:24:57.02:567,57,0	1/1:2,13:15:33.07:335,33,0	0/0:27,0:27:71.62:0,72,547	0/0:26,0:26:16.42:0,16,390	0/0:26,0:27:64.75:0,65,493	0/0:1,0:14:29.44:0,29,96
chr10	95906966	.	GCGGTTTTCCTC	G	2724.19	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.950;DP=566;FS=8.420;HRun=0;HaplotypeScore=177.4691;InbreedingCoeff=0.9993;MQ=82.79;MQ0=0;MQRankSum=-5.956;QD=75.67;ReadPosRankSum=-1.658;VQSLOD=2.7752;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.27:0,93,4526	0/0:11,0:11:30.09:0,30,1580	0/0:16,0:16:45.13:0,45,2089	0/0:22,0:22:64.46:0,64,2650	0/0:36,0:36:99:0,105,5365	0/0:22,0:21:63.22:0,63,3416	0/0:17,0:17:45.15:0,45,2594	1/1:1,21:22:63.18:1669,63,0	0/0:13,0:13:39.13:0,39,2250	0/0:21,0:19:57.20:0,57,3101	0/0:23,0:23:66.23:0,66,3776	0/0:15,0:15:45.07:0,45,2356	0/0:11,0:11:33.10:0,33,1630	0/0:26,0:26:75.26:0,75,4031	0/0:20,0:20:57.18:0,57,3043	0/0:16,0:16:45.15:0,45,2501	0/0:23,0:23:69.21:0,69,3760	0/0:12,0:12:36.11:0,36,1800	0/0:13,0:13:36.11:0,36,1785	0/0:40,0:40:99:0,117,6149	0/0:16,0:16:48.16:0,48,2649	0/0:22,0:22:66.23:0,66,3712	0/0:15,0:15:45.15:0,45,2594	0/0:16,0:16:45.15:0,45,2377	0/0:21,0:21:60.19:0,60,3222	0/0:19,0:19:57.19:0,57,3055	0/0:32,0:32:93.31:0,93,5076	1/1:1,13:14:33.11:1177,33,0
chr10	95907214	.	TA	T	1372.48	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.104;DP=540;FS=2.110;HRun=2;HaplotypeScore=67.2704;InbreedingCoeff=0.9489;MQ=89.24;MQ0=0;MQRankSum=-3.827;QD=33.48;ReadPosRankSum=-4.086;VQSLOD=2.2366;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.30:0,96,1398	0/0:10,0:10:30.09:0,30,430	0/0:18,0:18:51.13:0,51,721	0/0:22,0:22:63.21:0,63,920	0/0:22,0:22:66.19:0,66,947	0/0:21,0:20:63.21:0,63,943	0/0:24,0:24:69.21:0,69,995	1/1:2,36:38:99:1370,108,0	0/0:18,0:17:51.17:0,51,764	0/0:20,0:20:60.20:0,60,883	0/0:7,0:7:21.07:0,21,315	0/0:25,0:25:75.25:0,75,1124	0/0:11,0:11:30.10:0,30,450	0/0:14,0:14:39.12:0,39,564	0/0:20,0:20:60.20:0,60,894	0/0:18,0:18:54.18:0,54,809	0/0:28,0:28:84.26:0,84,1233	0/0:13,0:13:33.07:0,33,469	0/0:20,0:20:54.18:0,54,792	0/0:18,0:18:48.16:0,48,709	0/0:31,0:31:93.31:0,93,1391	0/0:8,0:8:21.07:0,21,315	0/0:4,0:4:12.03:0,12,162	0/0:19,0:19:51.16:0,51,744	0/0:12,0:12:36.12:0,36,540	0/0:28,0:28:84.28:0,84,1259	0/0:35,0:35:99:0,105,1555	1/1:0,3:3:9.03:117,9,0
chr10	95907356	.	G	GC	5424.55	PASS	AB=0.684;AC=51;AF=0.911;AN=56;BaseQRankSum=-1.203;DP=390;FS=24.523;HRun=1;HaplotypeScore=61.8940;InbreedingCoeff=0.7247;MQ=68.40;MQ0=6;MQRankSum=-3.163;QD=16.39;ReadPosRankSum=2.614;VQSLOD=3.5485;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:41.56:320,42,0	1/1:6,0:6:17.62:124,18,0	0/0:38,1:19:39.71:0,40,375	0/0:20,0:11:17.36:0,17,141	1/1:11,0:11:32.64:247,33,0	1/1:15,0:15:6.02:67,6,0	1/1:15,0:15:23.85:188,24,0	1/1:23,0:23:58.90:445,59,0	1/1:14,0:14:35.65:283,36,0	1/1:20,0:20:50.07:452,50,0	1/1:15,1:16:35.40:252,35,0	1/1:12,0:12:3.01:37,3,0	0/1:7,6:13:0:0,0,0	1/1:8,0:8:15.02:164,15,0	1/1:12,0:12:25.93:172,26,0	1/1:16,0:16:41.39:307,41,0	1/1:17,1:18:50.29:396,50,0	1/1:8,0:8:14.96:124,15,0	1/1:15,0:13:35.49:271,35,0	1/1:16,0:16:41.35:319,41,0	1/1:9,0:9:17.99:156,18,0	1/1:11,0:11:17.58:119,18,0	1/1:1,10:11:8.73:75,9,0	1/1:3,0:3:3.01:31,3,0	1/1:7,0:6:13.78:105,14,0	1/1:13,0:13:38.67:319,39,0	1/1:10,0:10:26.86:209,27,0	1/1:13,0:13:35.28:246,35,0
chr10	95907357	.	C	CCA	5591.94	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.887;DP=433;FS=17.828;HRun=0;HaplotypeScore=85.7381;InbreedingCoeff=0.7316;MQ=66.34;MQ0=9;MQRankSum=-3.117;QD=15.28;ReadPosRankSum=1.570;VQSLOD=3.2861;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:18:44.97:308,45,0	1/1:4,0:6:16.50:111,16,0	0/0:40,0:19:37.50:0,37,381	0/0:25,0:10:14.45:0,14,136	1/1:10,0:11:32.60:245,33,0	1/1:4,2:20:6.02:100,6,0	1/1:16,0:16:35.66:262,36,0	1/1:16,0:21:56:418,56,0	1/1:11,0:14:34.94:277,35,0	1/1:10,17:28:58.51:540,59,0	1/1:5,17:23:45.48:323,45,0	1/1:2,11:16:3.01:56,3,0	1/1:16,0:16:11.72:71,12,0	1/1:8,0:8:17.98:183,18,0	1/1:7,0:11:22.05:144,22,0	1/1:9,0:16:39.32:274,39,0	1/1:17,0:21:48.29:370,48,0	1/1:8,0:8:14.95:123,15,0	1/1:12,0:12:31.68:242,32,0	1/1:11,0:16:42.85:310,43,0	1/1:7,0:7:17.99:156,18,0	1/1:4,8:14:18.06:140,18,0	1/1:11,0:11:8.73:84,9,0	1/1:1,1:6:3.01:44,3,0	1/1:5,0:6:11.13:92,11,0	1/1:9,0:13:37.61:292,38,0	1/1:9,0:10:26.69:201,27,0	1/1:10,0:13:33:226,33,0
chr10	95907399	.	G	GT	822.43	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.420;DP=522;FS=1.719;HRun=6;HaplotypeScore=63.6803;InbreedingCoeff=0.9911;MQ=75.21;MQ0=1;MQRankSum=-2.110;QD=28.36;ReadPosRankSum=0.064;VQSLOD=4.2226;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.12:0,90,892	0/0:12,0:12:30.03:0,30,295	0/0:26,0:18:25.33:0,25,406	0/0:20,0:11:26.89:0,27,259	0/0:19,0:19:45.08:0,45,447	0/0:16,0:16:32.99:0,33,312	0/0:15,0:15:39.07:0,39,391	1/1:4,17:21:51.16:642,51,0	0/0:16,0:16:48.08:0,48,475	0/0:21,0:21:48.10:0,48,490	0/0:13,0:13:33.06:0,33,331	0/0:13,0:13:27.06:0,27,274	0/0:18,0:18:47.94:0,48,472	0/0:18,0:18:51.09:0,51,508	0/0:22,0:22:63.12:0,63,634	0/0:26,0:26:72.12:0,72,712	0/0:24,0:24:63.14:0,63,642	0/0:22,0:22:60.13:0,60,610	0/0:24,0:24:63.13:0,63,637	0/0:14,0:14:33.07:0,33,337	0/0:17,0:17:51.12:0,51,520	0/0:11,0:11:27.04:0,27,263	0/0:6,0:6:18.03:0,18,178	0/0:13,0:13:27.04:0,27,265	0/0:14,0:14:38.46:0,38,352	0/0:32,0:33:81.14:0,81,809	0/0:25,0:25:63.13:0,63,641	1/1:0,8:8:24.08:302,24,0
chr10	95907858	.	ACC	A	652.52	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.789;DP=370;FS=44.130;HRun=2;HaplotypeScore=61.1096;InbreedingCoeff=0.7871;MQ=75.39;MQ0=0;MQRankSum=-3.668;QD=25.10;ReadPosRankSum=0.529;VQSLOD=-0.0128;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:9.01:0,9,89	0/0:4,0:4:12.03:0,12,167	0/0:23,0:20:56.66:0,57,911	0/0:17,0:16:36.12:0,36,654	0/0:14,0:15:3.02:0,3,314	0/0:18,0:18:22.09:0,22,408	0/0:16,0:16:22.58:0,23,406	1/1:3,18:21:53.62:567,54,0	0/0:17,0:17:48.09:0,48,683	0/0:12,0:12:21.06:0,21,340	0/0:8,0:8:21.03:0,21,301	0/0:13,0:13:34.53:0,35,491	0/0:11,0:11:27.52:0,28,412	0/0:9,0:10:8.56:0,9,279	0/0:9,0:9:17.06:0,17,216	0/0:12,0:12:26.96:0,27,399	0/0:20,0:20:27.60:0,28,193	0/0:16,0:16:14.31:0,14,110	0/0:15,0:15:24:0,24,632	0/0:10,0:10:24.87:0,25,303	0/0:19,0:19:43.42:0,43,693	0/0:11,0:11:29.92:0,30,410	0/0:7,0:7:9.27:0,9,139	0/0:16,0:16:30.87:0,31,572	0/0:10,0:10:16.27:0,16,304	0/0:8,0:9:23.28:0,23,322	0/0:14,0:14:11.75:0,12,374	1/1:0,5:5:15.04:203,15,0
chr10	95908829	.	CT	C	1093.02	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.926;DP=666;FS=0.662;HRun=2;HaplotypeScore=64.5255;InbreedingCoeff=0.9948;MQ=88.58;MQ0=0;MQRankSum=-2.873;QD=29.54;ReadPosRankSum=-3.603;VQSLOD=2.3520;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1687	0/0:8,0:8:24.08:0,24,358	0/0:23,0:23:67.45:0,67,940	0/0:26,1:27:70.22:0,70,1101	0/0:18,0:18:54.18:0,54,805	0/0:21,0:21:60.19:0,60,873	0/0:24,0:24:72.21:0,72,1016	1/1:1,26:27:78.21:979,78,0	0/0:31,0:31:93.28:0,93,1333	0/0:25,0:25:75.22:0,75,1100	0/0:22,0:22:66.17:0,66,963	0/0:22,0:22:66.22:0,66,989	0/0:26,0:26:75.25:0,75,1101	0/0:22,0:22:63.20:0,63,926	0/0:32,0:32:96.31:0,96,1414	0/0:27,0:27:81.27:0,81,1213	0/0:33,0:33:99:0,99,1394	0/0:22,0:22:60.19:0,60,878	0/0:19,0:19:54.17:0,54,787	0/0:23,0:23:69.21:0,69,994	0/0:24,0:24:69.23:0,69,1027	0/0:21,0:21:63.19:0,63,905	0/0:15,0:15:45.15:0,45,674	0/0:31,0:31:93.29:0,93,1354	0/0:18,0:18:54.17:0,54,773	0/0:27,0:27:81.27:0,81,1213	0/0:29,0:28:81.26:0,81,1182	1/1:1,9:10:18.06:234,18,0
chr10	95908984	.	T	TTCTC	2188.35	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.284;DP=714;FS=15.255;HRun=0;HaplotypeScore=121.5656;InbreedingCoeff=0.9988;MQ=78.09;MQ0=1;MQRankSum=-3.385;QD=57.59;ReadPosRankSum=-2.991;VQSLOD=3.3367;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:54.83:0,55,1664	0/0:16,0:16:42.12:0,42,757	0/0:28,0:28:47.48:0,47,878	0/0:22,0:20:24.40:0,24,718	0/0:28,0:28:78.22:0,78,1438	0/0:34,0:34:96.32:0,96,1747	0/0:21,0:21:60.21:0,60,1135	1/1:3,21:26:72.14:1514,72,0	0/0:33,0:33:99:0,99,1710	0/0:32,0:32:87.24:0,87,1535	0/0:18,0:18:54.18:0,54,992	0/0:21,0:21:63.21:0,63,1161	0/0:22,0:22:63.21:0,63,1147	0/0:21,0:21:60.19:0,60,1103	0/0:39,0:39:99:0,117,2165	0/0:29,0:29:87.27:0,87,1543	0/0:25,0:25:75.23:0,75,1348	0/0:15,0:15:45.09:0,45,771	0/0:16,0:16:42.14:0,42,765	0/0:20,0:20:57.20:0,57,1078	0/0:33,0:33:90.27:0,90,1665	0/0:23,0:23:63.20:0,63,1126	0/0:28,0:28:84.20:0,84,1488	0/0:25,0:25:75.24:0,75,1385	0/0:28,0:28:81.26:0,81,1472	0/0:28,0:28:75.25:0,75,1388	0/0:39,0:38:99:0,114,2155	1/1:3,9:12:33.10:796,33,0
chr10	95909181	.	ACTTCTAGCTGCTGAGCCATCT	A	14996.27	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.265;DP=666;FS=0.872;HRun=0;HaplotypeScore=341.1574;InbreedingCoeff=0.9695;MQ=65.35;MQ0=1;MQRankSum=-13.411;QD=76.12;ReadPosRankSum=4.981;VQSLOD=3.6486;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,9940	0/0:5,0:5:15.05:0,15,1306	0/0:29,0:21:56.37:0,56,3323	0/0:34,0:29:81.28:0,81,4720	0/0:7,0:7:21.07:0,21,1683	1/1:7,23:30:45.15:2649,45,0	1/1:5,15:20:15.05:883,15,0	0/0:33,0:33:99:0,99,7536	0/0:32,0:32:90.30:0,90,8258	1/1:6,15:21:42.11:1908,42,0	1/1:2,6:8:6.02:353,6,0	1/1:5,19:24:42.62:2474,43,0	1/1:4,17:21:30.10:1768,30,0	1/1:4,23:27:37.07:2056,37,0	0/0:28,0:28:81.28:0,81,7830	0/0:29,0:29:87.28:0,87,7124	0/0:35,0:35:99:0,105,9078	0/0:30,0:30:90.24:0,90,7885	0/0:12,0:12:27.08:0,27,1942	0/0:20,0:20:54.13:0,54,4060	0/0:42,0:42:99:0,126,11642	1/1:2,13:15:27.09:1358,27,0	1/1:3,8:11:18.06:1017,18,0	1/1:4,16:20:9.50:531,10,0	0/0:18,0:18:54.19:0,54,5164	0/0:20,0:20:57.18:0,57,4455	0/0:38,0:36:99:0,111,9829	0/0:16,0:16:48.14:0,48,3912
chr10	95909221	.	C	CT	1302.07	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.556;DP=649;FS=8.861;HRun=1;HaplotypeScore=154.2980;InbreedingCoeff=0.9930;MQ=71.55;MQ0=0;MQRankSum=-0.137;QD=35.19;ReadPosRankSum=-3.733;VQSLOD=1.2682;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1526	0/0:12,0:12:36.12:0,36,467	0/0:18,0:17:24.93:0,25,506	0/0:29,0:26:51.08:0,51,772	0/0:16,0:16:42.10:0,42,502	0/0:26,0:26:62.89:0,63,700	0/0:17,0:17:30:0,30,339	1/1:2,25:27:75.22:1054,75,0	0/0:28,0:28:75.16:0,75,912	0/0:15,0:15:42.02:0,42,501	0/0:10,0:10:21.05:0,21,246	0/0:25,0:25:59.78:0,60,712	0/0:19,0:19:44.95:0,45,503	0/0:28,0:28:56.82:0,57,637	0/0:24,0:24:69.21:0,69,877	0/0:24,0:24:72.23:0,72,934	0/0:36,0:36:99:0,108,1401	0/0:30,0:30:87.26:0,87,1111	0/0:14,0:14:39.11:0,39,480	0/0:12,0:12:33.11:0,33,428	0/0:49,0:49:99:0,138,1715	0/0:18,0:18:36.10:0,36,450	0/0:14,0:14:21.05:0,21,258	0/0:17,0:17:24.03:0,24,291	0/0:30,0:30:90.28:0,90,1155	0/0:28,0:28:78.22:0,78,964	0/0:33,0:32:99:0,99,1278	1/1:0,10:10:29.93:370,30,0
chr10	95909285	.	T	TGTGAGCCGCA	2930.73	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.359;DP=740;FS=5.771;HRun=0;HaplotypeScore=236.9155;InbreedingCoeff=0.9981;MQ=77.53;MQ0=1;MQRankSum=-5.555;QD=88.81;ReadPosRankSum=-4.265;VQSLOD=1.9437;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,114,3515	0/0:17,0:17:48.16:0,48,1549	0/0:15,0:15:23.21:0,23,696	0/0:18,0:18:36.43:0,36,959	0/0:21,0:21:60.21:0,60,1886	0/0:22,0:22:57.20:0,57,1808	0/0:26,0:26:78.27:0,78,2503	1/1:15,6:22:57.11:2301,57,0	0/0:18,0:18:48.16:0,48,1539	0/0:36,0:36:99:0,108,3402	0/0:18,0:18:51.16:0,51,1591	0/0:32,0:32:90.31:0,90,2831	0/0:25,0:25:63.22:0,63,2024	0/0:29,0:29:78.27:0,78,2393	0/0:26,0:26:75.24:0,75,2279	0/0:37,0:37:99:0,105,3306	0/0:44,0:44:99:0,123,3760	0/0:26,0:26:72.25:0,72,2322	0/0:20,0:20:54.17:0,54,1578	0/0:26,0:26:75.24:0,75,2300	0/0:39,0:39:99:0,99,3016	0/0:29,0:29:84.29:0,84,2571	0/0:14,0:14:39.11:0,39,1055	0/0:29,0:28:60.21:0,60,1912	0/0:23,0:23:60.21:0,60,1871	0/0:39,0:39:99:0,111,3434	0/0:36,0:36:99:0,105,3281	1/1:7,3:10:27.04:751,27,0
chr10	95909406	.	TG	T	544.20	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.849;DP=718;FS=14.566;HRun=2;HaplotypeScore=80.4437;InbreedingCoeff=0.9974;MQ=89.19;MQ0=0;MQRankSum=-3.051;QD=24.74;ReadPosRankSum=-1.901;VQSLOD=1.9135;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.26:0,93,1331	0/0:11,0:11:30.10:0,30,449	0/0:34,0:34:99:0,102,1508	0/0:26,0:26:52.85:0,53,808	0/0:23,0:23:66.22:0,66,987	0/0:24,0:24:63.21:0,63,944	0/0:21,0:21:60.20:0,60,900	1/1:0,13:13:33.05:392,33,0	0/0:20,0:20:57.19:0,57,854	0/0:27,0:27:78.26:0,78,1168	0/0:14,0:14:33.11:0,33,486	0/0:28,0:28:84.27:0,84,1238	0/0:21,0:21:53.93:0,54,805	0/0:37,0:37:99:0,99,1466	0/0:23,0:23:69.23:0,69,1034	0/0:29,0:29:87.29:0,87,1286	0/0:46,0:46:99:0,138,2069	0/0:22,0:22:66.16:0,66,924	0/0:24,0:24:69.23:0,69,1034	0/0:29,0:29:60.20:0,60,899	0/0:44,0:44:99:0,126,1845	0/0:21,0:21:60.20:0,60,899	0/0:24,0:24:63.20:0,63,926	0/0:41,0:41:99:0,123,1821	0/0:18,0:18:54.16:0,54,788	0/0:24,0:24:69.23:0,69,1016	0/0:33,0:33:96.31:0,96,1403	1/1:0,9:9:21.05:272,21,0
chr10	95910256	.	CA	C	5247.38	PASS	AB=0.781;AC=48;AF=0.889;AN=54;BaseQRankSum=-4.508;DP=535;FS=0.000;HRun=9;HaplotypeScore=65.0929;InbreedingCoeff=0.5593;MQ=66.03;MQ0=30;MQRankSum=1.985;QD=10.47;ReadPosRankSum=6.410;VQSLOD=3.1297;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,19:31:60:540,60,0	1/1:0,0:6:10.19:30,10,0	0/1:43,1:22:1.82:2,0,311	0/0:32,0:12:15.25:0,15,127	1/1:2,0:15:21.17:68,21,0	1/1:3,21:23:53.06:473,53,0	1/1:8,22:27:25.16:364,25,0	./.	1/1:2,0:8:10.18:30,10,0	1/1:1,20:18:54.01:489,54,0	1/1:3,17:15:42.02:383,42,0	1/1:5,12:15:19.81:310,20,0	0/1:4,10:13:52.67:211,0,53	1/1:0,15:14:27.01:247,27,0	1/1:3,0:16:24.44:72,24,0	1/1:6,0:26:32.58:96,33,0	1/1:4,17:20:33.53:385,34,0	1/1:5,27:27:57.02:521,57,0	1/1:7,0:14:15.37:48,15,0	1/1:1,0:12:16.29:48,16,0	1/1:2,0:7:10.18:30,10,0	1/1:3,12:14:26.05:226,26,0	1/1:3,6:9:12.01:110,12,0	1/1:1,21:22:44.89:412,45,0	1/1:3,0:7:6.11:18,6,0	1/1:2,0:14:25.64:81,26,0	1/1:1,0:14:18.33:54,18,0	0/0:2,0:1:3.01:0,3,34
chr10	95910354	.	CA	C	1673.57	PASS	AB=0.638;AC=18;AF=0.346;AN=52;BaseQRankSum=-4.229;DP=430;FS=0.461;HRun=14;HaplotypeScore=56.7332;InbreedingCoeff=0.7759;MQ=56.16;MQ0=43;MQRankSum=2.909;QD=11.01;ReadPosRankSum=3.783;VQSLOD=3.3185;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,1:12:3.32:0,3,153	0/0:5,0:4:12.01:0,12,111	0/0:12,0:7:17.50:0,18,125	0/0:5,0:3:5.62:0,6,42	0/0:19,0:18:44.68:0,45,359	1/1:8,17:25:49.58:334,50,0	1/1:3,11:13:16.90:109,17,0	./.	0/0:12,0:11:23.72:0,24,195	1/1:3,19:22:58.55:396,59,0	1/1:3,9:13:29.68:191,30,0	1/1:10,8:15:28.66:185,29,0	0/1:6,3:10:10.97:70,0,11	1/1:6,3:8:19.23:120,19,0	0/0:18,0:17:38.08:0,38,323	0/0:13,0:13:29.58:0,30,227	0/0:19,0:13:15:0,15,134	0/0:22,0:18:34.80:0,35,275	0/0:27,1:18:27.35:0,27,379	0/0:18,0:16:44.65:0,45,373	0/0:15,1:15:12.45:0,12,258	1/1:2,8:11:20.78:144,21,0	0/1:2,7:9:35.02:82,0,35	1/1:3,12:17:37.23:241,37,0	0/0:19,1:17:18.34:0,18,301	0/0:19,0:19:47.65:0,48,403	0/0:21,1:21:26.85:0,27,365	./.
chr10	95910620	.	TA	T	4209.28	PASS	AB=0.520;AC=27;AF=0.482;AN=56;BaseQRankSum=-4.846;DP=420;FS=17.735;HRun=11;HaplotypeScore=55.7810;InbreedingCoeff=0.8736;MQ=65.61;MQ0=1;MQRankSum=1.494;QD=17.91;ReadPosRankSum=2.660;VQSLOD=2.8876;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:56.93:468,57,0	1/1:0,2:2:5.99:49,6,0	0/0:11,0:8:15.80:0,16,185	0/0:10,0:4:9.02:0,9,88	1/1:0,17:17:49.88:391,50,0	0/0:16,0:16:48.12:0,48,512	0/0:8,0:7:21.05:0,21,223	0/0:36,1:34:62.55:0,63,855	1/1:1,17:18:23.74:345,24,0	0/0:17,0:17:45.11:0,45,479	0/0:10,0:9:24.06:0,24,256	0/0:12,0:12:33.07:0,33,344	0/0:17,0:17:51.06:0,51,521	0/0:8,0:8:24.04:0,24,245	1/1:2,18:20:50.94:419,51,0	1/1:3,17:20:41.45:330,41,0	1/1:2,18:20:44.93:369,45,0	1/1:6,19:25:5.21:367,5,0	1/1:2,10:12:29.95:246,30,0	1/1:2,15:16:10.06:288,10,0	1/1:2,8:10:23.97:197,24,0	0/0:5,0:5:12.03:0,12,128	0/0:8,0:8:18.05:0,18,191	0/0:14,2:16:14.45:0,14,354	0/1:1,11:13:2.98:174,0,3	1/1:5,11:16:3.96:239,4,0	1/1:3,15:19:22.78:326,23,0	0/0:9,0:9:18.05:0,18,192
chr10	95912073	.	CT	C	14490.65	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=14.127;DP=711;FS=12.036;HRun=2;HaplotypeScore=78.5578;InbreedingCoeff=0.9965;MQ=77.75;MQ0=0;MQRankSum=-3.359;QD=35.96;ReadPosRankSum=2.120;VQSLOD=4.5883;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:90.29:1168,90,0	1/1:0,9:9:24.08:311,24,0	0/0:30,0:30:84.18:0,84,1127	0/0:28,0:28:78.22:0,78,1115	1/1:2,18:20:54.18:701,54,0	0/0:22,0:22:63.20:0,63,920	0/0:25,0:25:75.25:0,75,1104	1/1:1,30:31:90.26:1139,90,0	1/1:0,28:28:81.26:1051,81,0	0/0:29,0:29:87.28:0,87,1272	0/0:17,0:17:45.14:0,45,639	0/0:29,0:29:87.27:0,87,1266	0/0:30,0:30:90.29:0,90,1322	0/0:32,0:32:90.28:0,90,1309	1/1:0,41:41:99:1557,120,0	1/1:1,23:24:69.22:896,69,0	1/1:0,35:35:99:1285,99,0	1/1:0,25:25:66.21:857,66,0	1/1:0,16:15:45.15:584,45,0	1/1:1,20:21:57.19:740,57,0	1/1:1,38:39:99:1324,102,0	0/0:17,0:17:51.15:0,51,726	0/0:18,0:18:51.15:0,51,725	0/0:31,0:31:93.32:0,93,1393	1/1:0,17:17:48.16:623,48,0	1/1:1,19:20:15.21:695,15,0	1/1:0,35:35:99:1324,102,0	1/1:0,7:7:18.06:234,18,0
chr10	95912528	.	A	ATT	9502.70	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-11.285;DP=726;FS=0.629;HRun=10;HaplotypeScore=90.6195;InbreedingCoeff=0.9879;MQ=67.02;MQ0=2;MQRankSum=0.897;QD=30.75;ReadPosRankSum=0.274;VQSLOD=5.0491;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,103,1032	1/1:1,11:14:30.45:386,30,0	0/0:11,0:9:11.96:0,12,113	0/0:10,0:10:9.79:0,10,85	1/1:4,25:29:65.98:832,66,0	0/0:22,0:22:60.12:0,60,610	0/0:24,0:26:53.54:0,54,582	0/0:37,0:38:98.93:0,99,982	1/1:4,13:19:38.62:545,39,0	0/0:30,0:30:72.11:0,72,732	0/0:26,0:25:66.09:0,66,659	0/0:22,0:23:56.81:0,57,554	0/0:22,0:22:57.04:0,57,564	0/0:20,0:20:22.86:0,23,515	1/1:5,32:37:75.25:1102,75,0	1/1:6,29:34:69.23:1029,69,0	0/0:18,0:19:44.81:0,45,502	0/0:28,0:32:86.22:0,86,819	1/1:5,19:25:53.66:746,54,0	1/1:4,27:32:80.63:1089,81,0	1/1:1,14:15:39.13:581,39,0	0/0:35,0:35:87.15:0,87,878	0/0:25,0:25:48.01:0,48,477	0/0:21,0:21:54.03:0,54,531	1/1:3,21:24:45.11:645,45,0	1/1:10,36:47:29.54:1473,30,0	1/1:3,28:31:72.08:1075,72,0	0/0:18,0:19:53.79:0,54,512
chr10	95912898	.	G	GTTTTTTTGTT	8807.80	PASS	AB=0.991;AC=29;AF=0.518;AN=56;BaseQRankSum=-6.197;DP=691;FS=10.846;HRun=0;HaplotypeScore=194.4845;InbreedingCoeff=0.7554;MQ=41.89;MQ0=23;MQRankSum=-10.410;QD=23.55;ReadPosRankSum=-4.650;VQSLOD=2.3323;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:33:26.78:73,0,27	1/1:1,6:10:12.04:432,12,0	0/0:39,0:11:19.43:0,19,189	0/0:44,0:11:11.40:0,11,139	1/1:4,15:25:18.05:603,18,0	0/0:16,0:15:30.54:0,31,488	0/0:21,0:18:49.08:0,49,556	1/1:26,0:25:7.56:231,8,0	1/1:4,16:21:18.91:680,19,0	0/0:28,0:26:53.84:0,54,954	0/0:26,0:25:25.73:0,26,540	0/0:24,0:22:41.38:0,41,566	0/0:22,0:18:35.70:0,36,529	0/0:22,0:20:47.92:0,48,678	1/1:1,13:17:14.99:443,15,0	1/1:2,13:19:27.09:1338,27,0	1/1:24,0:22:15.64:129,16,0	0/1:26,0:21:33.84:34,0,83	1/1:25,0:25:71.64:1367,72,0	1/1:2,12:18:14.86:427,15,0	1/1:8,0:15:18.06:400,18,0	0/0:26,0:23:38.75:0,39,502	0/0:23,0:18:32.29:0,32,356	0/0:25,0:22:54.76:0,55,842	1/1:4,25:34:20.98:753,21,0	1/1:25,0:27:9.84:1162,10,0	1/1:8,16:25:15.52:688,16,0	0/1:9,0:9:8.25:47,0,8
chr10	95912903	.	GTT	G	113.84	PASS	AB=0.873;AC=7;AF=0.125;AN=56;BaseQRankSum=-2.640;DP=675;FS=1.566;HRun=15;HaplotypeScore=141.6793;InbreedingCoeff=-0.1510;MQ=39.75;MQ0=33;MQRankSum=-3.322;QD=0.60;ReadPosRankSum=-3.514;VQSLOD=0.1177;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:33:20.97:21,0,71	0/0:8,0:8:13.42:0,13,102	0/0:34,0:9:2.64:0,3,17	0/0:42,0:9:2.26:0,2,14	0/0:20,0:22:20.82:0,21,183	0/0:11,3:13:26.92:0,27,214	0/1:16,7:18:70.19:70,0,176	0/0:27,0:26:32.74:0,33,190	0/0:20,0:20:20.26:0,20,189	0/1:20,7:25:78.99:79,0,225	0/0:21,4:24:16.71:0,17,278	0/0:20,2:20:30.85:0,31,319	0/0:17,4:17:41.37:0,41,315	0/0:18,4:20:44.77:0,45,353	0/0:22,0:21:16.15:0,16,135	0/0:20,0:18:30.07:0,30,353	0/1:26,0:23:25.09:25,0,27	0/1:24,0:19:17.56:18,0,65	0/0:25,0:23:53.04:0,53,432	0/0:19,0:17:17.63:0,18,145	0/0:15,0:14:15.41:0,15,139	0/1:16,9:21:19.77:20,0,178	0/0:17,6:18:28.41:0,28,193	0/1:20,6:23:7.75:8,0,259	0/0:33,0:33:24.01:0,24,261	0/0:23,0:25:54.14:0,54,436	0/0:20,0:20:26.19:0,26,276	0/0:14,0:11:12.36:0,12,48
chr10	95912907	.	T	TG	3211.86	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-7.438;DP=671;FS=3.342;HRun=0;HaplotypeScore=123.6237;InbreedingCoeff=0.8606;MQ=37.50;MQ0=38;MQRankSum=6.938;QD=12.12;ReadPosRankSum=6.162;VQSLOD=4.5082;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:32:81.09:0,81,578	0/0:8,0:8:14.05:0,14,77	0/1:28,0:5:1.76:2,0,38	0/0:36,0:5:0.17:0,0,48	0/0:22,0:22:14.03:0,14,123	1/1:6,8:12:16.91:210,17,0	1/1:16,8:19:6.05:246,6,0	0/0:28,0:27:68.37:0,68,428	0/0:20,0:20:21.58:0,22,176	1/1:21,9:29:29.70:416,30,0	1/1:12,12:23:58.28:435,58,0	1/1:7,14:18:50.75:398,51,0	1/1:12,13:21:47.90:356,48,0	1/1:10,13:20:53.26:408,53,0	0/0:22,0:20:11.82:0,12,96	0/0:21,0:18:29.54:0,30,220	0/0:27,0:24:24.47:0,24,176	0/0:24,0:19:43.89:0,44,347	0/0:27,0:22:47.82:0,48,420	0/0:17,1:16:10.72:0,11,120	0/0:16,0:14:13.73:0,14,111	1/1:18,8:22:39.77:308,40,0	1/1:13,10:18:27.30:272,27,0	1/1:9,17:23:46.92:370,47,0	0/0:33,0:32:17.54:0,18,188	0/0:28,1:24:4.96:0,5,212	0/0:23,0:21:29.44:0,29,251	0/0:13,0:10:27.18:0,27,185
chr10	95912910	.	T	TTG	3689.98	PASS	AB=0.947;AC=23;AF=0.411;AN=56;BaseQRankSum=-5.599;DP=671;FS=0.810;HRun=0;HaplotypeScore=128.8789;InbreedingCoeff=0.5620;MQ=37.51;MQ0=39;MQRankSum=4.195;QD=11.08;ReadPosRankSum=6.636;VQSLOD=3.1840;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:34:71.56:0,72,549	0/0:8,0:8:4.89:0,5,32	0/0:25,0:3:5.97:0,6,51	0/0:35,0:5:2.30:0,2,47	0/0:21,0:21:15.98:0,16,125	1/1:7,8:13:26.01:280,26,0	1/1:16,8:19:5.55:250,6,0	0/0:27,0:26:64.18:0,64,400	0/0:19,0:19:16.40:0,16,106	1/1:19,9:28:50.96:450,51,0	1/1:12,12:23:24.08:362,24,0	1/1:9,14:19:50.02:485,50,0	1/1:11,13:21:49.50:457,50,0	1/1:10,12:19:32.47:383,32,0	0/0:22,0:20:3.29:0,3,73	0/0:21,0:18:23.07:0,23,126	0/0:27,0:23:4.18:0,4,89	0/0:24,0:19:40.14:0,40,331	0/1:28,0:22:9.80:10,0,282	0/1:18,0:16:1.40:1,0,71	0/1:15,0:13:3.60:4,0,81	0/1:18,8:22:3.17:239,0,3	1/1:13,10:18:1.65:250,2,0	1/1:10,17:24:42.24:424,42,0	0/0:31,0:30:22.89:0,23,165	0/1:32,1:27:94.36:94,0,169	0/0:23,0:21:23.67:0,24,224	0/0:13,0:10:26.79:0,27,170
chr10	95913180	.	T	TACTACATGCCTACATG	10770.87	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.649;DP=710;FS=2.597;HRun=0;HaplotypeScore=317.4235;InbreedingCoeff=0.9983;MQ=82.10;MQ0=0;MQRankSum=-11.353;QD=136.34;ReadPosRankSum=-0.288;VQSLOD=4.3977;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,15:43:65.82:4800,66,0	0/0:8,0:8:24.08:0,24,1136	0/0:15,0:15:39.13:0,39,1326	0/0:27,0:27:63.98:0,64,2708	0/0:21,0:21:44.73:0,45,1729	0/0:23,0:23:66.23:0,66,2880	0/0:39,0:39:99:0,111,4520	0/0:22,0:22:57.18:0,57,2316	0/0:21,0:21:63.21:0,63,2614	0/0:29,0:29:81.27:0,81,3346	0/0:12,0:12:36.11:0,36,1403	0/0:33,0:33:93.32:0,93,3598	0/0:36,0:36:93.29:0,93,3752	0/0:27,0:26:72.25:0,72,3207	0/0:31,0:31:90.31:0,90,4003	0/0:21,0:21:63.19:0,63,2605	1/1:11,8:21:54.19:3981,54,0	1/1:9,4:15:33.11:1990,33,0	0/0:16,0:16:42.13:0,42,1698	0/0:13,0:13:36.12:0,36,1586	0/0:81,0:81:99:0,235,9709	0/0:22,0:21:54.19:0,54,2274	0/0:12,0:11:27.09:0,27,1213	0/0:38,0:38:96.33:0,96,4062	0/0:24,0:23:66.23:0,66,2753	0/0:26,0:26:72.25:0,72,3105	0/0:24,0:24:66.23:0,66,2805	0/0:10,0:10:27.09:0,27,1179
chr10	95913818	.	T	TATC	3712.77	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-8.203;DP=496;FS=2.493;HRun=0;HaplotypeScore=74.1811;InbreedingCoeff=0.9949;MQ=86.99;MQ0=0;MQRankSum=-2.613;QD=50.86;ReadPosRankSum=3.025;VQSLOD=6.0658;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:57.08:1259,57,0	0/0:13,0:13:39.13:0,39,665	0/0:19,0:19:48.16:0,48,766	0/0:15,0:15:38.63:0,39,584	0/0:9,0:9:20.93:0,21,299	0/0:15,0:15:45.15:0,45,767	0/0:22,0:22:66.14:0,66,1091	1/1:4,5:9:18.06:379,18,0	0/0:22,0:22:66.16:0,66,1092	0/0:19,0:19:39.12:0,39,640	0/0:18,0:18:48.12:0,48,786	0/0:17,0:17:45.15:0,45,732	0/0:21,0:21:60.21:0,60,1022	0/0:21,0:21:60.21:0,60,1022	0/0:27,0:27:78.24:0,78,1277	0/0:23,0:23:66.21:0,66,1077	1/1:0,11:11:18.06:415,18,0	1/1:0,16:16:42.14:968,42,0	0/0:13,0:13:39.12:0,39,615	0/0:21,0:21:54.18:0,54,913	0/0:32,0:32:93.32:0,93,1583	0/0:13,0:13:30.09:0,30,484	0/0:14,0:14:38.49:0,38,617	0/0:20,0:20:60.19:0,60,990	0/0:22,0:22:62.58:0,63,1031	0/0:14,0:14:42.14:0,42,711	0/0:13,0:13:39.13:0,39,664	1/1:1,11:12:30.10:691,30,0
chr10	95914060	.	T	TTTTG	1447.48	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.385;DP=631;FS=17.007;HRun=0;HaplotypeScore=109.5013;InbreedingCoeff=0.9869;MQ=72.32;MQ0=2;MQRankSum=-2.723;QD=30.80;ReadPosRankSum=-3.189;VQSLOD=1.7004;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:80.84:0,81,1209	0/0:13,0:13:24.08:0,24,391	0/0:36,0:28:20.92:0,21,253	0/0:26,0:22:27.06:0,27,388	0/0:24,0:24:54.18:0,54,879	0/0:14,0:14:33.10:0,33,514	0/0:20,0:20:45.15:0,45,733	1/1:18,5:32:23.11:622,23,0	0/0:23,0:23:51.13:0,51,735	0/0:27,0:27:51.07:0,51,727	0/0:16,0:16:39.13:0,39,635	0/0:23,0:23:54.14:0,54,786	0/0:16,0:16:36.12:0,36,586	0/0:25,0:25:57.17:0,57,882	0/0:34,0:34:81.25:0,81,1253	0/0:19,0:19:39.13:0,39,633	0/0:26,0:28:66.17:0,66,982	0/0:31,0:31:61.40:0,61,1015	0/0:15,0:14:21.06:0,21,299	0/0:20,0:20:54.17:0,54,835	0/0:24,0:25:52.72:0,53,814	0/0:12,0:12:18.06:0,18,288	0/0:17,0:17:27.09:0,27,440	0/0:23,0:23:57.19:0,57,924	0/0:12,0:12:24.06:0,24,366	0/0:22,0:23:57.16:0,57,837	0/0:23,0:23:51.17:0,51,806	1/1:2,13:15:39.13:947,39,0
chr10	95914801	.	A	AG	539.68	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.411;DP=720;FS=10.979;HRun=0;HaplotypeScore=87.1259;InbreedingCoeff=0.9677;MQ=87.26;MQ0=1;MQRankSum=-6.414;QD=22.49;ReadPosRankSum=-0.933;VQSLOD=4.3363;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,2049	0/0:20,0:20:60.17:0,60,814	0/0:28,0:28:78.15:0,78,1028	0/0:21,0:21:54.08:0,54,675	0/0:25,0:25:72.24:0,72,1005	0/0:19,0:18:54.18:0,54,749	0/0:27,0:27:81.24:0,81,1098	1/1:10,11:21:23:561,23,0	0/0:26,0:26:78.26:0,78,1091	0/0:32,0:32:90.30:0,90,1254	0/0:23,0:23:66.22:0,66,923	0/0:25,0:25:72.24:0,72,1006	0/0:31,0:31:93.30:0,93,1286	0/0:19,0:19:57.17:0,57,779	0/0:35,0:35:99:0,105,1451	0/0:28,0:28:84.28:0,84,1175	0/0:31,0:31:93.31:0,93,1300	0/0:18,0:18:51.17:0,51,713	0/0:12,0:12:33.09:0,33,443	0/0:29,0:29:84.28:0,84,1175	0/0:37,0:37:99:0,108,1489	0/0:26,0:26:78.25:0,78,1075	0/0:29,0:29:87.29:0,87,1213	0/0:23,0:23:69.22:0,69,949	0/0:23,0:23:66.22:0,66,923	0/0:23,0:23:69.23:0,69,953	0/0:36,0:36:99:0,108,1486	1/1:0,3:3:9.02:92,9,0
chr10	95914804	.	G	GAGAGGTGAAGT	3127.58	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.566;DP=713;FS=18.440;HRun=0;HaplotypeScore=230.1085;InbreedingCoeff=0.9693;MQ=85.96;MQ0=1;MQRankSum=-6.077;QD=125.10;ReadPosRankSum=-1.372;VQSLOD=2.5099;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,5064	0/0:18,0:18:54.18:0,54,1925	0/0:27,0:27:68.41:0,68,2268	0/0:19,0:19:51.79:0,52,1349	0/0:25,0:25:75.25:0,75,2655	0/0:17,0:16:48.16:0,48,1604	0/0:26,0:26:75.21:0,75,2390	1/1:14,8:22:66.20:2762,66,0	0/0:26,0:26:78.25:0,78,2727	0/0:31,0:31:84.28:0,84,2841	0/0:22,0:22:66.23:0,66,2406	0/0:24,0:24:72.24:0,72,2419	0/0:32,0:32:93.30:0,93,3226	0/0:22,0:22:60.16:0,60,1901	0/0:35,0:35:99:0,105,3710	0/0:28,0:28:84.27:0,84,2904	0/0:32,0:32:93.32:0,93,3250	0/0:18,0:18:54.12:0,54,1744	0/0:14,0:14:39.03:0,39,1022	0/0:29,0:29:84.25:0,84,2752	0/0:38,0:38:99:0,111,3738	0/0:24,0:24:72.19:0,72,2525	0/0:27,0:27:81.26:0,81,2805	0/0:24,0:24:69.19:0,69,2309	0/0:24,0:24:72.20:0,72,2378	0/0:24,0:24:72.22:0,72,2393	0/0:34,0:34:99:0,102,3457	1/1:0,3:3:9.03:480,9,0
chr10	95915977	.	CA	C	941.24	PASS	AB=0.970;AC=9;AF=0.161;AN=56;BaseQRankSum=16.271;DP=661;FS=0.000;HRun=1;HaplotypeScore=92.1149;InbreedingCoeff=0.8133;MQ=77.05;MQ0=0;MQRankSum=-0.106;QD=6.27;ReadPosRankSum=3.183;VQSLOD=0.5561;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:47,2:49:4.77:341,5,0	0/0:8,0:8:24.08:0,24,350	0/0:22,1:23:56.68:0,57,715	0/0:16,0:15:42.07:0,42,554	0/0:23,0:23:67.06:0,67,865	0/0:16,0:16:48.14:0,48,678	0/0:29,0:29:84.26:0,84,1202	0/1:31,1:32:71.02:140,0,71	0/0:31,0:31:90.27:0,90,1260	0/0:27,0:27:78.25:0,78,1121	0/0:7,0:7:21.07:0,21,290	0/0:18,0:18:54.18:0,54,780	0/0:18,0:18:51.13:0,51,716	0/0:27,0:27:81.24:0,81,1125	0/0:30,0:30:87.27:0,87,1247	0/0:34,0:34:99:0,99,1305	1/1:39,0:39:73.98:348,74,0	1/1:26,0:26:59.40:234,59,0	0/0:19,0:19:57.17:0,57,791	0/0:15,0:15:42.13:0,42,576	0/0:51,0:51:99:0,153,2083	0/0:22,0:22:63.10:0,63,830	0/0:18,0:18:47.84:0,48,615	0/0:24,0:24:69.18:0,69,946	0/0:17,0:16:51.17:0,51,698	0/0:18,0:18:54.15:0,54,744	0/0:20,0:20:60.13:0,60,823	1/1:4,0:4:9.31:32,9,0
chr10	95915978	.	AC	A	4307.73	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=15.148;DP=666;FS=0.000;HRun=6;HaplotypeScore=81.2997;InbreedingCoeff=0.9913;MQ=76.97;MQ0=0;MQRankSum=-0.170;QD=28.91;ReadPosRankSum=2.021;VQSLOD=5.3920;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,43:49:99:1320,123,0	0/0:8,0:8:24.08:0,24,316	0/0:23,0:23:48.06:0,48,559	0/0:16,0:15:33.11:0,33,426	0/0:24,0:24:57.19:0,57,750	0/0:17,0:17:48.16:0,48,629	0/0:31,0:31:90.24:0,90,1126	1/1:5,26:31:81.19:860,81,0	0/0:32,0:32:90.26:0,90,1141	0/0:27,0:27:75.24:0,75,974	0/0:7,0:7:21.07:0,21,276	0/0:20,0:20:57.14:0,57,716	0/0:18,0:18:51.16:0,51,651	0/0:27,0:27:78.24:0,78,1003	0/0:30,0:30:90.27:0,90,1157	0/0:34,0:34:81.24:0,81,1038	1/1:1,38:39:99:1193,111,0	1/1:0,26:26:74.96:806,75,0	0/0:19,0:19:51.17:0,51,671	0/0:15,0:15:45.14:0,45,578	0/0:53,0:53:99:0,141,1825	0/0:21,0:21:51.14:0,51,642	0/0:18,0:18:45.12:0,45,574	0/0:24,0:24:66.16:0,66,836	0/0:17,0:16:51.17:0,51,671	0/0:16,0:16:48.15:0,48,617	0/0:20,0:20:57.15:0,57,718	1/1:0,4:4:12.03:129,12,0
chr10	95917270	.	C	CT	10641.77	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=11.229;DP=588;FS=8.601;HRun=5;HaplotypeScore=93.0773;InbreedingCoeff=0.9565;MQ=86.56;MQ0=0;MQRankSum=-1.787;QD=28.45;ReadPosRankSum=3.315;VQSLOD=4.8733;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,31:36:78.25:1002,78,0	1/1:0,8:8:24.08:309,24,0	0/0:40,0:33:48.65:0,49,531	0/1:29,0:23:1.48:1,0,223	1/1:3,27:30:75.24:959,75,0	0/0:21,0:21:60.14:0,60,638	0/0:19,0:19:48.09:0,48,495	1/1:2,24:26:72.18:861,72,0	1/1:1,19:20:54.16:680,54,0	0/0:15,0:15:45.10:0,45,470	0/0:23,0:23:67.34:0,67,689	0/0:12,0:12:36.09:0,36,387	0/0:19,0:19:48.12:0,48,514	0/0:20,0:20:57.13:0,57,604	1/1:0,19:19:48.16:619,48,0	1/1:1,20:21:39.13:503,39,0	1/1:3,22:25:54.17:694,54,0	1/1:1,15:16:30.10:387,30,0	1/1:5,19:24:60.14:708,60,0	1/1:1,18:19:51.11:636,51,0	1/1:2,25:27:66.21:848,66,0	0/0:14,0:14:39.08:0,39,409	0/0:18,0:18:48.12:0,48,515	0/0:13,0:13:36.07:0,36,378	1/1:0,16:16:42.13:532,42,0	1/1:4,24:28:42.98:861,43,0	1/1:0,20:20:54.17:696,54,0	1/1:1,9:10:27.09:346,27,0
chr10	95917484	.	A	AC	1266.08	PASS	AB=0.897;AC=18;AF=0.321;AN=56;BaseQRankSum=-3.695;DP=411;FS=9.591;HRun=9;HaplotypeScore=96.6496;InbreedingCoeff=0.6196;MQ=74.30;MQ0=0;MQRankSum=-0.826;QD=8.98;ReadPosRankSum=-2.783;VQSLOD=1.1619;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:23.97:0,24,208	0/0:4,0:4:5.04:0,5,40	0/0:32,0:29:58.47:0,58,471	0/0:26,0:23:24.04:0,24,191	0/0:20,0:20:32.97:0,33,286	1/1:12,3:15:8.72:72,9,0	1/1:9,15:24:19.03:418,19,0	0/0:6,0:20:24.43:0,24,72	0/0:17,0:17:26.97:0,27,234	0/1:7,2:9:8.02:128,0,8	0/1:8,0:8:20.02:28,0,20	1/1:10,3:13:9.01:91,9,0	1/1:7,2:9:12.02:125,12,0	1/1:4,3:7:11.90:85,12,0	0/0:23,0:23:35.44:0,35,307	0/1:16,0:17:4.15:4,0,185	0/0:16,0:14:35.68:0,36,291	0/0:12,0:12:26.98:0,27,234	0/0:7,0:7:14.99:0,15,128	0/0:16,0:16:21.45:0,21,182	0/0:20,0:20:23.83:0,24,202	0/1:7,3:10:19.92:26,0,20	1/1:4,3:7:9.01:91,9,0	1/1:13,9:22:44.89:388,45,0	0/0:12,0:12:23.99:0,24,208	0/0:13,0:13:23.99:0,24,208	0/0:10,0:10:17.94:0,18,149	0/0:2,0:3:2.04:0,2,6
chr10	95917499	.	ATC	A	155.50	PASS	AB=0.969;AC=9;AF=0.161;AN=56;BaseQRankSum=-1.135;DP=423;FS=0.776;HRun=0;HaplotypeScore=155.2013;InbreedingCoeff=0.0607;MQ=62.71;MQ0=6;MQRankSum=-0.330;QD=1.44;ReadPosRankSum=4.023;VQSLOD=2.3085;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:14:14.33:77,14,0	0/0:4,0:4:5.23:0,5,56	0/0:49,0:31:62.58:0,63,852	0/0:25,0:21:42.08:0,42,550	0/0:24,0:24:33.57:0,34,329	0/0:8,0:8:11.40:0,11,37	0/1:16,3:19:22.15:82,0,22	0/0:20,0:20:32.73:0,33,298	0/0:17,0:17:19.53:0,20,110	0/1:8,0:8:11.40:13,0,11	0/1:10,1:11:27.90:30,0,28	0/0:8,0:8:10.90:0,11,37	0/1:6,0:6:4.38:4,0,22	0/0:9,0:9:16.09:0,16,55	0/0:24,0:24:31.98:0,32,192	0/0:18,0:18:29.21:0,29,233	0/1:16,0:14:46.42:46,0,50	0/1:12,0:12:23.48:23,0,77	0/0:13,0:12:22.10:0,22,162	0/0:20,0:20:21.94:0,22,169	0/0:19,0:19:19.50:0,19,192	0/0:4,0:4:3.29:0,3,11	0/0:7,0:7:9.86:0,10,30	0/1:21,0:21:18.22:18,0,27	0/0:16,0:16:22.28:0,22,130	0/0:16,0:16:37.98:0,38,328	0/0:11,0:11:28.77:0,29,271	0/0:2,0:2:2.60:0,3,10
chr10	95917506	.	T	TCACA	3975.97	PASS	AB=0.831;AC=21;AF=0.375;AN=56;BaseQRankSum=-4.198;DP=466;FS=5.271;HRun=0;HaplotypeScore=185.7041;InbreedingCoeff=0.5820;MQ=55.11;MQ0=10;MQRankSum=-3.297;QD=20.18;ReadPosRankSum=-2.898;VQSLOD=2.8011;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:18.06:0,18,298	0/0:4,0:4:6.02:0,6,82	0/0:56,0:29:81.14:0,81,1339	0/0:29,0:20:44.71:0,45,723	0/0:23,0:23:36.10:0,36,474	1/1:4,8:14:17.78:431,18,0	1/1:16,5:21:19.29:409,19,0	0/0:12,0:12:35.60:0,36,469	0/0:15,0:15:23.98:0,24,347	0/1:4,6:12:4.71:397,0,5	1/1:3,11:14:18.40:430,18,0	1/1:1,10:11:18.06:438,18,0	1/1:1,7:9:11.48:289,11,0	1/1:2,8:10:18.06:438,18,0	0/0:25,0:25:42.12:0,42,589	0/0:18,0:18:36.12:0,36,546	0/0:14,0:13:42.10:0,42,682	0/0:12,0:12:30.07:0,30,448	0/1:13,0:12:29.37:29,0,330	0/0:18,0:18:27.08:0,27,382	0/1:25,0:25:27.93:28,0,275	0/1:2,4:10:17.35:276,0,17	1/1:2,6:8:9.03:216,9,0	1/1:16,14:32:19.48:573,19,0	0/0:15,0:15:29.99:0,30,424	0/1:18,0:17:23.70:24,0,609	0/0:11,0:11:33.11:0,33,571	0/0:1,0:1:3.01:0,3,39
chr10	95917508	.	TCA	T	915.32	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=7.110;DP=488;FS=2.590;HRun=0;HaplotypeScore=177.0648;InbreedingCoeff=0.2432;MQ=52.74;MQ0=13;MQRankSum=-4.740;QD=3.74;ReadPosRankSum=0.648;VQSLOD=2.8756;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,5:17:19.30:190,19,0	0/1:4,0:4:6.60:7,0,27	0/0:58,0:28:38.34:0,38,456	0/0:30,0:19:29.74:0,30,303	0/1:23,0:23:5.69:6,0,112	0/0:16,0:16:20.98:0,21,178	0/0:23,0:23:20.93:0,21,214	0/1:13,0:13:5.04:5,0,50	1/1:15,0:15:10.47:51,10,0	0/0:13,0:13:26.92:0,27,233	0/0:15,0:15:21.09:0,21,145	0/0:13,0:13:23.62:0,24,196	0/0:10,0:10:14.99:0,15,129	0/0:10,0:10:20.03:0,20,162	1/1:25,0:25:3.07:93,3,0	0/1:18,0:18:60.16:62,0,60	1/1:9,7:14:29:258,29,0	1/1:10,3:14:9.62:152,10,0	0/1:12,0:10:23.73:47,0,24	0/1:18,0:18:28.84:45,0,29	0/1:24,0:24:12.15:12,0,44	0/0:12,0:12:14.92:0,15,120	0/0:9,0:9:15.58:0,16,111	0/0:33,0:33:25.24:0,25,213	0/1:15,0:15:1.98:70,0,2	0/1:18,0:17:48.14:48,0,94	0/1:11,0:11:39.68:40,0,93	1/1:1,0:1:2.60:10,3,0
chr10	95917517	.	CACACACACACAATA	C	7979.71	PASS	AB=0.842;AC=21;AF=0.375;AN=56;BaseQRankSum=1.715;DP=525;FS=6.105;HRun=0;HaplotypeScore=234.7616;InbreedingCoeff=0.2663;MQ=44.42;MQ0=19;MQRankSum=-3.412;QD=30.34;ReadPosRankSum=6.220;VQSLOD=3.1740;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:24:7.39:7,0,188	0/1:3,1:4:9.48:148,0,9	0/0:68,0:29:43.61:0,44,1015	0/1:35,0:20:21.79:22,0,726	0/1:8,10:18:99:513,0,137	0/0:18,0:18:28.09:0,28,1161	0/0:26,0:26:43.95:0,44,1476	0/1:14,0:14:54.33:54,0,118	1/1:0,13:13:14.79:595,15,0	0/0:17,0:17:39.13:0,39,1523	0/0:15,0:15:21.14:0,21,672	0/0:17,0:17:29.36:0,29,1396	0/0:10,0:10:11.45:0,11,467	0/0:10,0:10:19.48:0,19,630	1/1:12,10:22:15.14:1124,15,0	1/1:8,9:17:24.02:1033,24,0	0/0:14,0:12:31.28:0,31,302	0/1:11,0:11:99:131,0,171	0/1:8,4:9:54.84:576,0,55	1/1:4,14:18:8.09:673,8,0	0/1:21,4:25:84.24:139,0,84	0/0:14,0:14:11.06:0,11,872	0/0:14,0:13:25.05:0,25,898	0/0:38,0:37:45.17:0,45,1506	1/1:7,6:14:6.11:813,6,0	0/1:2,21:22:66.03:1454,0,66	1/1:6,5:11:23.99:698,24,0	0/0:1,0:1:3.01:0,3,48
chr10	95917527	.	CAATA	C	3061.13	PASS	AB=0.920;AC=25;AF=0.446;AN=56;BaseQRankSum=9.075;DP=571;FS=6.971;HRun=0;HaplotypeScore=215.1933;InbreedingCoeff=0.0942;MQ=42.68;MQ0=18;MQRankSum=-6.539;QD=9.69;ReadPosRankSum=3.854;VQSLOD=2.1894;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,1:26:16.02:16,0,85	0/1:5,0:5:9.48:80,0,9	0/0:68,0:26:42.70:0,43,1154	0/1:35,3:22:34.65:35,0,932	0/1:18,5:23:38.14:169,0,38	0/0:19,0:19:2.64:0,3,758	0/0:24,1:25:36.62:0,37,985	1/1:5,7:12:32.94:543,33,0	1/1:13,0:13:14.84:140,15,0	0/0:20,0:20:51.17:0,51,971	0/0:17,0:17:2.22:0,2,679	0/0:21,0:21:9.74:0,10,827	0/0:12,0:12:2.03:0,2,389	0/0:14,0:14:15.37:0,15,655	1/1:16,3:20:15.09:281,15,0	1/1:13,5:18:26.30:300,26,0	0/1:16,3:17:89.78:90,0,120	0/1:7,4:11:18.43:193,0,18	0/1:10,2:11:34:213,0,34	0/1:17,0:17:7.89:148,0,8	0/1:29,0:29:54.10:54,0,117	0/1:15,0:15:17.94:18,0,458	0/0:17,0:16:17.89:0,18,669	0/0:41,1:41:45.81:0,46,1034	1/1:14,4:18:5.70:195,6,0	0/1:23,0:22:4.90:467,0,5	1/1:10,3:13:4.07:245,4,0	1/1:0,1:1:3.01:50,3,0
chr10	95917531	.	A	AAC	906.43	PASS	AB=0.976;AC=15;AF=0.268;AN=56;BaseQRankSum=3.404;DP=601;FS=8.868;HRun=0;HaplotypeScore=222.2350;InbreedingCoeff=-0.1254;MQ=42.94;MQ0=20;MQRankSum=-3.669;QD=3.43;ReadPosRankSum=0.745;VQSLOD=1.7345;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,1:26:15.94:46,0,16	1/1:5,0:5:6.35:44,6,0	0/0:70,0:24:42.99:0,43,510	0/0:36,0:22:37.75:0,38,436	0/1:24,0:24:17.35:75,0,17	0/0:19,0:19:36.10:0,36,444	0/0:21,0:21:40.97:0,41,502	0/1:11,0:11:36.35:36,0,66	0/1:16,0:16:25.35:31,0,25	0/0:22,0:22:47.02:0,47,515	0/0:18,0:18:36.02:0,36,423	0/0:23,0:23:35.71:0,36,529	0/0:12,0:12:21.05:0,21,248	0/0:17,0:17:39.09:0,39,449	0/1:23,0:23:50.47:50,0,72	0/1:23,0:23:28.53:104,0,29	0/1:15,5:18:8.56:308,0,9	0/1:11,1:12:3.37:135,0,3	0/1:15,0:12:26.63:40,0,27	0/1:16,0:16:26.60:27,0,50	0/1:34,0:34:10.03:17,0,10	0/0:18,0:17:24.63:0,25,294	0/0:17,0:16:24.22:0,24,362	0/0:41,0:41:61.91:0,62,669	0/0:19,0:19:8.50:0,9,68	0/1:24,0:23:27.89:148,0,28	0/1:13,0:13:0.42:0,0,43	0/0:1,0:1:2.74:0,3,12
chr10	95917602	.	T	TCA	477.54	PASS	AB=0.915;AC=7;AF=0.125;AN=56;BaseQRankSum=4.214;DP=725;FS=3.640;HRun=0;HaplotypeScore=312.8078;InbreedingCoeff=0.3398;MQ=48.09;MQ0=7;MQRankSum=-3.726;QD=6.37;ReadPosRankSum=-3.344;VQSLOD=1.9862;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,11:31:18.86:212,0,19	0/1:8,0:8:15.12:15,0,197	0/0:40,0:15:8.42:0,8,189	0/0:27,0:14:18.33:0,18,182	0/0:37,0:37:48.49:0,48,596	0/0:29,0:29:63.08:0,63,626	0/0:21,0:21:43.85:0,44,462	0/1:8,0:9:39.38:39,0,63	0/0:28,0:28:52.08:0,52,578	0/0:26,0:25:62.91:0,63,750	0/0:30,0:30:67.15:0,67,839	0/0:30,0:30:63.20:0,63,798	0/0:25,0:25:68.70:0,69,801	0/0:30,0:30:74.61:0,75,874	0/0:31,0:31:35.28:0,35,517	0/0:25,0:25:38.66:0,39,496	1/1:11,3:12:8.49:122,8,0	1/1:7,4:11:2.60:215,3,0	0/0:21,0:14:7.96:0,8,273	0/0:19,0:19:37:0,37,458	0/0:40,0:39:23.10:0,23,272	0/0:33,0:33:81.51:0,82,795	0/0:21,0:21:38.54:0,39,474	0/0:45,0:44:40.96:0,41,517	0/0:27,0:27:39.99:0,40,410	0/0:38,0:37:89.99:0,90,1081	0/0:21,0:21:41.41:0,41,477	0/0:6,0:6:1.18:0,1,109
chr10	95917620	.	A	AAAAT	2046.05	PASS	AB=0.879;AC=20;AF=0.357;AN=56;BaseQRankSum=8.242;DP=745;FS=2.767;HRun=0;HaplotypeScore=329.5117;InbreedingCoeff=-0.5538;MQ=42.83;MQ0=9;MQRankSum=-6.489;QD=4.01;ReadPosRankSum=-9.674;VQSLOD=-0.3856;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,1:25:99:118,0,174	0/1:7,4:11:95.58:96,0,287	0/0:43,0:14:6.09:0,6,615	0/0:32,0:12:27.97:0,28,433	0/1:31,7:38:52.46:52,0,945	0/1:22,5:28:99:190,0,738	0/1:18,0:18:34.76:35,0,583	0/0:23,0:21:24.03:0,24,348	0/1:22,4:26:98.30:98,0,874	0/1:25,5:29:99:336,0,983	0/1:31,3:34:11.01:11,0,1210	0/1:27,3:30:94.49:94,0,1104	0/1:21,4:25:99:105,0,1073	0/0:29,1:30:28.94:0,29,1396	0/1:25,7:32:99:170,0,716	0/0:23,1:24:12.08:0,12,805	0/1:10,2:11:97.36:182,0,97	0/1:11,0:11:50.32:50,0,291	0/1:20,1:15:38.37:38,0,491	0/1:17,7:24:99:152,0,672	0/0:36,1:35:15.07:0,15,450	0/1:22,13:35:99:226,0,944	0/1:19,2:21:3.55:4,0,776	0/0:33,5:37:21.10:0,21,735	0/1:24,4:27:47.87:48,0,609	0/1:36,3:38:99:159,0,1551	0/1:20,1:21:39.90:40,0,685	0/0:8,0:8:13.86:0,14,168
chr10	95917621	.	C	CAT	1172.16	PASS	AB=0.876;AC=19;AF=0.339;AN=56;BaseQRankSum=6.628;DP=766;FS=4.340;HRun=0;HaplotypeScore=321.6372;InbreedingCoeff=-0.5029;MQ=43.16;MQ0=8;MQRankSum=-4.891;QD=2.17;ReadPosRankSum=-10.057;VQSLOD=-0.2008;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:19.51:0,20,76	0/1:7,4:11:29.06:29,0,224	0/0:43,0:14:23.04:0,23,372	0/0:34,0:12:26.78:0,27,289	0/1:31,7:38:47.84:48,0,665	0/1:22,6:28:99:129,0,549	0/0:18,0:18:6.71:0,7,423	0/0:24,0:22:17.65:0,18,237	0/1:22,4:27:77.43:77,0,587	0/1:26,5:30:99:180,0,668	0/1:31,3:34:34.29:34,0,837	0/1:28,3:31:67.97:68,0,772	0/1:21,4:25:69.86:70,0,752	0/0:27,1:34:56.04:0,56,966	0/1:25,7:32:99:105,0,474	0/0:24,1:26:26.02:0,26,568	0/0:13,0:12:11.11:0,11,33	0/1:11,0:11:17.50:18,0,52	0/1:19,0:15:2.30:2,0,322	0/1:18,7:25:99:129,0,471	0/1:36,1:35:17.05:17,0,272	0/1:23,13:36:99:140,0,688	0/1:21,2:23:7.74:8,0,531	0/1:34,5:38:18.89:19,0,433	0/1:26,4:29:99:118,0,403	0/1:38,3:40:99:124,0,996	0/1:20,1:21:14.47:14,0,454	0/0:8,0:8:12.46:0,12,103
chr10	95917622	.	ACACT	A	4657.22	PASS	AB=0.962;AC=26;AF=0.464;AN=56;BaseQRankSum=0.478;DP=766;FS=1.079;HRun=0;HaplotypeScore=319.5068;InbreedingCoeff=-0.5699;MQ=43.29;MQ0=8;MQRankSum=-2.340;QD=7.14;ReadPosRankSum=-11.380;VQSLOD=0.0929;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:24:29.63:77,0,30	0/1:11,0:11:59.31:59,0,314	0/0:41,0:14:23.21:0,23,473	0/0:35,0:12:17.44:0,17,274	0/1:35,3:38:99:323,0,1030	0/1:26,2:28:99:253,0,765	0/0:19,0:19:10.47:0,10,391	0/1:17,3:22:24.23:178,0,24	0/1:26,1:27:99:178,0,814	0/1:27,3:29:99:170,0,907	0/1:32,2:34:99:115,0,1250	0/1:31,1:32:99:128,0,965	0/1:25,0:25:71.64:72,0,905	0/1:34,0:34:45.15:45,0,1046	0/1:32,1:33:99:380,0,585	0/1:25,1:26:76.41:76,0,748	0/1:13,0:12:3.69:21,0,4	1/1:11,0:11:18.63:239,19,0	0/0:18,0:13:26.16:0,26,398	0/1:22,3:25:99:487,0,685	0/1:37,0:35:54.11:54,0,224	0/1:33,4:37:99:841,0,956	0/1:22,1:23:99:162,0,611	0/1:37,1:37:99:112,0,361	0/1:29,1:29:99:350,0,461	0/1:41,0:40:99:156,0,1371	0/1:21,0:21:30.81:31,0,673	1/1:5,3:8:10.25:150,10,0
chr10	95917624	.	ACT	A	2484.61	PASS	AB=0.988;AC=26;AF=0.464;AN=56;BaseQRankSum=0.786;DP=765;FS=3.304;HRun=0;HaplotypeScore=304.6752;InbreedingCoeff=-0.7033;MQ=43.57;MQ0=8;MQRankSum=-2.334;QD=3.62;ReadPosRankSum=-10.376;VQSLOD=-0.3207;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,2:23:92.67:107,0,93	0/1:11,0:11:5.98:6,0,226	0/0:45,0:13:14.75:0,15,428	0/1:34,0:12:4.68:5,0,208	0/1:38,0:38:99:126,0,688	0/1:27,0:27:70.76:71,0,519	0/0:17,0:17:11.64:0,12,319	0/1:19,7:24:11.05:212,0,11	0/1:28,0:28:99:120,0,575	0/1:29,0:29:55.88:56,0,658	0/1:35,0:35:47.08:47,0,827	0/1:34,0:34:92.53:93,0,688	0/1:25,0:25:33.85:34,0,691	0/1:34,0:34:21.40:21,0,783	0/1:34,0:34:99:212,0,416	0/1:23,0:23:24.70:25,0,563	0/1:14,0:13:30.58:77,0,31	1/1:9,2:11:4.91:121,5,0	0/0:17,0:13:18.92:0,19,333	0/1:25,0:25:99:177,0,462	0/1:37,0:35:68.17:68,0,151	0/1:37,0:37:99:341,0,696	0/1:24,0:24:99:121,0,428	0/1:35,0:34:52.47:52,0,314	0/1:30,0:29:99:224,0,342	0/1:43,0:42:99:224,0,962	0/1:20,0:20:27.52:28,0,476	0/1:8,0:8:7.89:74,0,8
chr10	95917630	.	ACT	A	679.08	PASS	AB=0.990;AC=15;AF=0.268;AN=56;BaseQRankSum=-5.622;DP=764;FS=0.410;HRun=0;HaplotypeScore=307.5055;InbreedingCoeff=-0.1615;MQ=43.63;MQ0=15;MQRankSum=5.018;QD=2.05;ReadPosRankSum=-6.841;VQSLOD=0.5646;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:16.52:0,17,109	0/1:9,0:9:1.88:2,0,109	0/0:46,0:12:11.53:0,12,323	0/0:32,0:11:7.25:0,7,259	0/0:38,1:39:7.09:0,7,340	0/0:28,0:28:10.27:0,10,338	0/1:21,0:21:81.92:82,0,130	0/1:23,4:25:5.24:283,0,5	0/0:29,0:29:32.40:0,32,361	0/0:29,0:29:6.90:0,7,371	0/0:33,0:33:9.68:0,10,272	0/0:33,0:33:22.34:0,22,405	0/1:24,0:24:57.39:57,0,265	0/1:32,0:32:55.86:56,0,268	0/0:32,0:32:19.53:0,20,273	0/0:30,0:30:11.14:0,11,329	0/0:11,0:11:26.76:0,27,233	0/1:12,0:12:18.47:88,0,18	0/1:17,0:14:21.26:21,0,179	0/0:26,0:26:17.27:0,17,308	0/1:36,0:34:71.03:71,0,80	0/0:37,0:37:19.09:0,19,354	0/1:23,0:23:17.91:18,0,270	0/1:33,0:32:34.37:34,0,108	0/1:30,0:29:24.92:25,0,199	0/1:41,0:40:17.54:18,0,481	0/1:19,0:19:5.35:5,0,230	1/1:8,0:8:17.64:75,18,0
chr10	95917632	.	TCACA	T	189.37	PASS	AB=0.853;AC=3;AF=0.054;AN=56;BaseQRankSum=6.059;DP=760;FS=0.000;HRun=0;HaplotypeScore=329.3423;InbreedingCoeff=0.5041;MQ=43.77;MQ0=14;MQRankSum=-4.062;QD=5.12;ReadPosRankSum=2.558;VQSLOD=1.5370;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:20.99:0,21,296	0/0:9,0:9:17.71:0,18,301	0/0:42,0:10:15.03:0,15,453	0/0:33,0:11:22.08:0,22,334	0/0:37,0:37:68.98:0,69,1048	0/0:28,0:28:50.42:0,50,805	0/0:19,0:19:29.84:0,30,370	0/1:24,5:27:99:259,0,202	0/0:28,0:28:53.09:0,53,890	0/0:32,0:32:78.34:0,78,1209	0/0:32,0:32:71.97:0,72,1157	0/0:33,0:33:63.47:0,63,1082	0/0:23,0:23:48.60:0,49,840	0/0:31,0:31:59.81:0,60,1000	0/0:31,0:31:30.33:0,30,653	0/0:29,0:29:51.29:0,51,829	0/0:12,0:12:22.01:0,22,327	0/0:12,0:12:4.15:0,4,129	0/0:16,0:13:27.09:0,27,437	0/0:26,0:26:44.01:0,44,733	0/0:37,0:36:23.05:0,23,294	0/0:38,0:38:54.99:0,55,911	0/0:24,0:24:49.60:0,50,659	0/0:34,0:33:28.12:0,28,349	0/0:28,0:27:43.28:0,43,566	0/0:41,0:40:99:0,111,1597	0/0:20,0:20:42.87:0,43,717	1/1:8,0:8:7.74:25,8,0
chr10	95917642	.	ACAAAAT	A	475.57	PASS	AB=0.916;AC=4;AF=0.071;AN=56;BaseQRankSum=7.313;DP=783;FS=8.453;HRun=0;HaplotypeScore=345.0048;InbreedingCoeff=-0.0888;MQ=45.23;MQ0=13;MQRankSum=-3.706;QD=4.71;ReadPosRankSum=-1.633;VQSLOD=0.7998;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:13.99:0,14,354	0/0:8,0:8:13.77:0,14,252	0/1:45,0:12:13.32:13,0,428	0/0:35,0:13:16.93:0,17,360	0/0:44,0:44:59.73:0,60,1839	0/0:29,0:29:63.19:0,63,1406	0/0:23,0:23:18.85:0,19,1039	0/1:34,1:34:99:262,0,1004	0/0:30,0:30:77.84:0,78,1334	0/0:30,0:30:73.18:0,73,1665	0/0:32,0:32:78.65:0,79,1191	0/0:33,0:33:92.58:0,93,1725	0/0:23,0:23:62.93:0,63,1123	0/0:28,0:28:59.88:0,60,1195	0/0:31,0:31:79.16:0,79,1466	0/0:30,0:30:69.58:0,70,1272	0/0:15,0:15:0.50:0,1,307	0/1:12,0:12:47.15:47,0,200	0/0:13,0:11:23.20:0,23,539	0/0:24,0:24:72.10:0,72,1375	0/0:41,0:40:36.90:0,37,1192	0/0:38,0:38:99:0,114,2061	0/0:23,0:23:37.26:0,37,1290	0/0:33,0:33:52.70:0,53,1250	0/0:30,0:29:42.27:0,42,1325	0/0:40,0:39:99:0,108,2419	0/0:20,0:20:16.27:0,16,801	0/1:5,4:9:59.68:260,0,60
chr10	95917644	.	AAAAT	A	407.78	PASS	AB=0.910;AC=6;AF=0.107;AN=56;BaseQRankSum=8.579;DP=787;FS=0.000;HRun=0;HaplotypeScore=325.0609;InbreedingCoeff=-0.1260;MQ=45.50;MQ0=12;MQRankSum=-4.686;QD=2.98;ReadPosRankSum=-1.937;VQSLOD=1.5172;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,2:28:7.84:0,8,395	0/0:8,0:8:18.40:0,18,289	0/1:44,0:12:1.93:2,0,388	0/0:36,0:13:6.18:0,6,307	0/0:44,0:44:57.75:0,58,1702	0/0:26,2:28:13.94:0,14,1274	0/1:20,2:22:22.11:22,0,1026	0/1:36,2:37:99:105,0,1270	0/0:30,0:30:63.62:0,64,1323	0/0:29,0:29:67.20:0,67,1413	0/0:33,0:33:78.07:0,78,1159	0/0:35,0:35:99:0,99,1883	0/0:23,0:23:47.48:0,47,1109	0/0:27,1:28:63:0,63,1246	0/0:31,0:31:40.24:0,40,1402	0/0:30,0:30:69.36:0,69,1240	0/0:15,0:15:2.72:0,3,320	0/1:10,1:11:79.92:80,0,213	0/1:12,1:11:8.70:9,0,462	0/0:23,1:24:68.18:0,68,1282	0/0:41,0:40:15.64:0,16,1111	0/0:38,0:38:99:0,109,1818	0/0:23,0:23:33.97:0,34,1303	0/0:34,0:34:22.52:0,23,1308	0/0:31,0:30:37.77:0,38,1347	0/0:40,0:39:99:0,111,2442	0/0:20,0:20:18.21:0,18,785	0/1:6,3:9:57.18:305,0,57
chr10	95917648	.	TCA	T	844.57	PASS	AB=0.604;AC=4;AF=0.071;AN=56;BaseQRankSum=3.615;DP=796;FS=23.090;HRun=0;HaplotypeScore=310.1879;InbreedingCoeff=0.2934;MQ=44.29;MQ0=11;MQRankSum=-2.490;QD=14.56;ReadPosRankSum=-2.016;VQSLOD=1.9858;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,18:30:3.14:469,3,0	0/0:8,0:8:12:0,12,170	0/0:41,0:10:14.28:0,14,192	0/0:37,0:12:14.01:0,14,171	0/0:44,0:44:49.18:0,49,1082	0/0:27,0:27:42.20:0,42,803	0/0:21,0:21:15.65:0,16,601	0/0:43,0:42:75.98:0,76,786	0/0:29,0:29:48.15:0,48,768	0/0:29,0:29:53.09:0,53,765	0/0:31,0:31:46.84:0,47,644	0/0:38,0:38:83.08:0,83,1164	0/0:23,0:23:41.76:0,42,635	0/0:27,0:27:33.71:0,34,556	0/0:32,0:32:71.28:0,71,1090	0/0:30,1:31:10:0,10,636	0/1:4,11:15:19.61:275,0,20	0/1:5,7:12:17.28:203,0,17	0/0:14,0:12:13.98:0,14,231	0/0:22,0:22:39.32:0,39,743	0/0:42,0:43:58.66:0,59,931	0/0:35,0:35:53.70:0,54,1108	0/0:24,0:24:53.32:0,53,794	0/0:37,0:37:52.03:0,52,858	0/0:33,0:32:58.19:0,58,900	0/0:38,1:38:19.26:0,19,965	0/0:19,0:19:16.21:0,16,410	0/0:10,0:10:12.97:0,13,68
chr10	95917678	.	T	TCA	71.57	PASS	AB=0.974;AC=8;AF=0.143;AN=56;BaseQRankSum=9.362;DP=878;FS=2.047;HRun=0;HaplotypeScore=294.0775;InbreedingCoeff=0.0910;MQ=45.91;MQ0=11;MQRankSum=-7.244;QD=0.44;ReadPosRankSum=-3.808;VQSLOD=1.4055;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,2:35:21.30:0,21,646	0/1:10,0:10:13.71:14,0,226	0/0:38,0:12:28.73:0,29,269	0/0:41,0:15:35.32:0,35,406	0/1:39,0:39:0.65:1,0,659	0/0:26,0:26:50.87:0,51,526	0/1:31,3:34:87.74:88,0,784	0/0:29,0:35:54.46:0,54,384	0/0:28,0:28:60.08:0,60,751	0/0:34,1:35:25.45:0,25,1098	0/0:24,0:24:44.93:0,45,632	0/0:39,0:39:99:0,99,1158	0/0:23,0:23:35.99:0,36,574	0/0:38,0:38:77.91:0,78,872	0/0:33,0:33:63.34:0,63,870	0/1:35,1:36:2.20:2,0,800	0/0:20,0:20:30.08:0,30,487	0/1:18,1:19:8.35:8,0,452	0/0:18,0:15:30.09:0,30,372	0/0:22,0:22:48.62:0,49,561	0/0:69,5:73:1.89:0,2,930	0/0:40,0:40:72.09:0,72,878	0/0:25,0:25:45.88:0,46,768	0/0:49,3:52:77.66:0,78,981	0/0:36,0:35:21.66:0,22,828	0/0:32,1:33:37.65:0,38,985	0/1:18,0:18:48.61:49,0,278	1/1:5,0:6:4.55:28,5,0
chr10	95917692	.	T	TCA	586.72	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.768;DP=935;FS=5.401;HRun=0;HaplotypeScore=270.3194;InbreedingCoeff=0.9636;MQ=49.72;MQ0=11;MQRankSum=-5.535;QD=16.30;ReadPosRankSum=-3.782;VQSLOD=2.5013;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:75.14:0,75,909	0/0:9,0:9:18.06:0,18,227	0/0:50,0:20:41.80:0,42,478	0/0:59,0:21:25.89:0,26,372	0/0:40,0:40:68.80:0,69,860	0/0:26,0:26:29.28:0,29,540	0/0:37,0:37:71.35:0,71,900	1/1:23,9:32:41.13:567,41,0	0/0:29,0:29:58.96:0,59,714	0/0:39,0:39:96.11:0,96,1173	0/0:27,0:27:53.80:0,54,652	0/0:37,0:37:78.25:0,78,984	0/0:27,0:27:75.24:0,75,941	0/0:38,0:38:84.18:0,84,1060	0/0:37,0:37:84.24:0,84,1024	0/0:38,0:38:57.22:0,57,887	0/0:24,0:24:33.11:0,33,416	0/0:21,0:21:48.15:0,48,600	0/0:16,0:14:33.11:0,33,413	0/0:22,0:22:33.11:0,33,413	0/0:82,0:81:89.24:0,89,1346	0/0:32,0:31:69.11:0,69,838	0/0:26,0:26:47.52:0,48,707	0/0:52,0:52:89.91:0,90,1122	0/0:35,0:35:74.89:0,75,899	0/0:32,0:32:84.25:0,84,1032	0/0:18,0:18:32.94:0,33,408	1/1:0,3:4:9.03:134,9,0
chr10	95917723	.	ACACT	A	10540.26	PASS	AB=0.571;AC=21;AF=0.375;AN=56;BaseQRankSum=3.990;DP=941;FS=3.048;HRun=0;HaplotypeScore=243.3648;InbreedingCoeff=0.9183;MQ=69.67;MQ0=12;MQRankSum=-1.868;QD=34.33;ReadPosRankSum=6.180;VQSLOD=4.8167;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:69.50:0,69,1687	1/1:1,8:9:21.07:377,21,0	0/0:79,0:54:99:0,121,2493	0/0:103,0:57:99:0,122,2030	1/1:3,26:29:57.20:1020,57,0	0/0:24,0:24:60.21:0,60,1528	0/0:39,0:39:93.32:0,93,2303	0/0:49,0:48:99:0,127,2667	1/1:6,24:30:60.20:1043,60,0	0/0:33,0:33:87.30:0,87,2194	0/0:17,0:17:42.11:0,42,982	0/0:30,0:30:81.26:0,81,2022	0/0:29,0:29:81.28:0,81,2040	0/0:39,0:39:96.33:0,96,2429	1/1:3,30:33:75.16:1293,75,0	1/1:7,22:29:60.20:1059,60,0	0/0:25,0:25:24.08:0,24,622	0/0:22,0:22:57.15:0,57,1382	1/1:5,19:23:60.17:936,60,0	1/1:2,10:12:27.09:484,27,0	1/1:11,68:78:87.76:2118,88,0	0/0:21,0:20:54.17:0,54,1339	0/0:22,0:22:53.82:0,54,1222	0/0:51,0:51:75.24:0,75,1829	1/1:3,24:27:44.95:808,45,0	0/1:4,12:16:35.77:648,0,36	1/1:0,19:19:42.14:753,42,0	0/0:5,0:5:12:0,12,253
chr10	95917769	.	CCTCCCTCTCTCTCTCTCT	C	2171.28	PASS	AB=0.879;AC=6;AF=0.107;AN=56;BaseQRankSum=0.033;DP=707;FS=9.132;HRun=0;HaplotypeScore=358.6804;InbreedingCoeff=0.2055;MQ=57.76;MQ0=8;MQRankSum=-4.820;QD=22.16;ReadPosRankSum=0.340;VQSLOD=0.8437;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,3:26:90.40:891,0,90	0/0:12,0:12:23.64:0,24,627	0/0:23,0:19:31.78:0,32,938	0/0:43,0:33:66.56:0,67,1689	0/0:23,0:23:29.71:0,30,483	0/0:22,0:23:56.97:0,57,2229	0/0:36,0:35:63.20:0,63,1855	0/1:34,0:32:99:402,0,319	0/0:32,0:31:63.20:0,63,2908	0/0:23,0:23:64.55:0,65,2235	0/0:11,0:11:8.81:0,9,212	0/0:23,0:23:57.97:0,58,2248	0/0:27,0:27:73.53:0,74,2564	0/0:31,0:29:69.08:0,69,2491	0/0:37,0:36:47.32:0,47,1679	0/0:23,0:23:44.90:0,45,1093	1/1:1,16:18:9.03:382,9,0	0/1:11,2:14:99:582,0,130	0/0:24,0:23:57.13:0,57,2039	0/0:20,0:18:26.59:0,27,1007	0/0:55,0:54:82.82:0,83,2182	0/0:18,0:16:10.91:0,11,319	0/0:22,0:22:33.37:0,33,1494	0/0:39,0:38:39.65:0,40,1102	0/0:20,0:20:30.88:0,31,810	0/0:27,0:25:67.72:0,68,3114	0/0:17,0:17:39.86:0,40,1130	0/1:5,0:5:38.91:39,0,183
chr10	95917773	.	C	CCTCTCTCTCTCT	8565.60	PASS	AB=0.963;AC=46;AF=0.852;AN=54;BaseQRankSum=-5.102;DP=684;FS=16.482;HRun=0;HaplotypeScore=308.8588;InbreedingCoeff=0.1678;MQ=53.98;MQ0=10;MQRankSum=2.265;QD=14.07;ReadPosRankSum=-0.661;VQSLOD=2.0193;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:25:25.82:26,0,64	1/1:10,0:10:5.85:110,6,0	./.	0/0:38,0:26:0.71:0,1,1	1/1:20,1:21:3.27:14,3,0	1/1:25,0:24:24.04:454,24,0	1/1:34,0:33:30.57:822,31,0	1/1:29,0:28:1.98:41,2,0	1/1:34,1:34:23.96:666,24,0	1/1:25,0:25:38.45:610,38,0	1/1:11,0:11:0.47:1,0,0	1/1:24,0:24:19.68:379,20,0	1/1:25,0:26:36.94:931,37,0	1/1:33,0:31:36.10:804,36,0	1/1:36,0:35:23.90:573,24,0	1/1:22,0:23:18.06:541,18,0	0/0:17,0:17:5.05:0,5,90	0/1:12,0:12:86.76:87,0,209	1/1:23,0:22:14.99:295,15,0	1/1:20,0:18:3.95:65,4,0	1/1:47,1:47:6.14:147,6,0	1/1:19,0:17:5.71:70,6,0	1/1:19,0:20:13.60:321,14,0	0/1:38,0:38:46.76:293,0,47	1/1:20,0:20:3.01:49,3,0	1/1:24,2:24:34:1234,34,0	1/1:16,0:16:0.47:1,0,0	0/1:6,0:7:12.17:34,0,12
chr10	95917962	.	A	AGGGTTGG	2823.82	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.219;DP=736;FS=3.369;HRun=0;HaplotypeScore=179.3811;InbreedingCoeff=0.9417;MQ=87.85;MQ0=0;MQRankSum=-5.804;QD=65.67;ReadPosRankSum=-5.951;VQSLOD=2.5640;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,144,3424	0/0:9,0:9:27.09:0,27,625	0/0:40,0:40:93.25:0,93,2090	0/0:19,0:19:23.93:0,24,823	0/0:34,0:34:90.27:0,90,2164	0/0:20,0:20:54.19:0,54,1311	0/0:25,0:25:60.21:0,60,1367	1/1:23,13:40:84.27:2703,84,0	0/0:39,0:39:99:0,105,2482	0/0:28,0:28:69.23:0,69,1637	0/0:23,0:23:63.21:0,63,1479	0/0:18,0:18:54.19:0,54,1331	0/0:31,0:31:84.29:0,84,2047	0/0:33,0:33:81.24:0,81,1835	0/0:40,0:39:96.29:0,96,2231	0/0:22,0:22:66.21:0,66,1577	0/0:22,0:22:57.20:0,57,1394	0/0:20,0:20:54.14:0,54,1243	0/0:25,0:25:57.19:0,57,1314	0/0:23,0:23:66.23:0,66,1590	0/0:12,0:12:30.10:0,30,717	0/0:23,0:23:57.19:0,57,1404	0/0:27,0:27:78.27:0,78,1886	0/0:25,0:25:63.22:0,63,1514	0/0:24,0:24:69.23:0,69,1633	0/0:33,0:33:84.27:0,84,1938	0/0:24,0:24:57.20:0,57,1401	1/1:1,2:3:6.02:233,6,0
chr10	95918330	.	CTCCTGAGTCTCTTTCCTCTCAG	C	1169.43	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.741;DP=750;FS=0.000;HRun=0;HaplotypeScore=412.8057;InbreedingCoeff=0.9413;MQ=88.56;MQ0=0;MQRankSum=-0.272;QD=40.33;ReadPosRankSum=-2.661;VQSLOD=0.5603;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,105,9785	0/0:8,0:8:24.08:0,24,2193	0/0:29,0:29:87.30:0,87,5951	0/0:33,0:33:55.25:0,55,3488	0/0:21,0:21:57.20:0,57,4981	0/0:21,0:21:63.22:0,63,5897	0/0:25,0:25:69.24:0,69,6304	1/1:17,8:25:24.08:921,24,0	0/0:33,0:33:90.31:0,90,8467	0/0:26,0:26:72.25:0,72,6281	0/0:22,0:22:60.21:0,60,5382	0/0:40,0:40:99:0,108,10171	0/0:26,0:26:78.25:0,78,7165	0/0:33,0:33:90.31:0,90,8766	0/0:31,0:31:75.26:0,75,6380	0/0:34,0:34:99:0,102,9287	0/0:32,0:32:81.26:0,81,7611	0/0:23,0:23:66.23:0,66,6003	0/0:26,0:26:75.25:0,75,5819	0/0:21,0:21:57.20:0,57,5654	0/0:48,0:48:99:0,135,11964	0/0:18,0:18:51.18:0,51,4915	0/0:15,0:15:42.14:0,42,4217	0/0:35,0:35:93.21:0,93,7643	0/0:12,0:12:36.12:0,36,3577	0/0:35,0:35:96.33:0,96,9224	0/0:31,0:31:81.28:0,81,7732	1/1:2,2:4:6.02:359,6,0
chr10	95919147	.	ACCCACTC	A	2481.41	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.284;DP=802;FS=8.929;HRun=0;HaplotypeScore=187.3878;InbreedingCoeff=0.9913;MQ=81.91;MQ0=0;MQRankSum=-7.441;QD=59.08;ReadPosRankSum=-2.616;VQSLOD=2.1901;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,166,6426	0/0:9,0:9:27.09:0,27,989	0/0:22,0:22:63.22:0,63,2364	0/0:22,0:22:66.22:0,66,2229	0/0:22,0:22:66.23:0,66,2605	0/0:21,0:21:63.22:0,63,2434	0/0:32,0:32:93.30:0,93,3553	1/1:3,32:35:93.30:2210,93,0	0/0:34,0:34:99:0,102,3978	0/0:42,0:42:99:0,126,4830	0/0:20,0:20:57.20:0,57,2278	0/0:31,0:31:87.30:0,87,3452	0/0:25,0:25:66.23:0,66,2621	0/0:33,0:33:99:0,99,3959	0/0:45,0:45:99:0,129,5102	0/0:31,0:31:90.29:0,90,3484	0/0:29,0:29:87.30:0,87,3395	0/0:19,0:19:54.19:0,54,2159	0/0:17,0:17:51.17:0,51,1891	0/0:29,0:29:84.27:0,84,3175	0/0:45,0:45:99:0,126,4964	0/0:29,0:29:84.27:0,84,3250	0/0:19,0:19:57.20:0,57,2171	0/0:33,0:33:99:0,99,3922	0/0:28,0:28:81.28:0,81,3240	0/0:23,0:23:69.24:0,69,2711	0/0:41,0:41:99:0,120,4663	1/1:0,7:7:15.05:389,15,0
chr10	95919418	.	G	GATGTCATGCATATATT	3921.66	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.816;DP=717;FS=26.796;HRun=0;HaplotypeScore=300.4157;InbreedingCoeff=0.7572;MQ=75.54;MQ0=0;MQRankSum=-4.351;QD=67.61;ReadPosRankSum=-7.499;VQSLOD=1.3053;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:93.18:0,93,3197	0/0:9,0:9:24.05:0,24,799	0/0:13,0:13:1.04:0,1,189	0/0:22,0:22:6.49:0,6,284	0/0:16,0:16:27.08:0,27,948	0/0:22,0:22:45.07:0,45,1197	0/0:26,0:26:60.02:0,60,1177	1/1:50,0:50:99:3692,114,0	0/0:32,0:32:78.19:0,78,2875	0/0:36,0:36:83.92:0,84,2460	0/0:19,0:19:48.11:0,48,1481	0/0:25,0:25:72.15:0,72,2349	0/0:23,0:23:57.18:0,57,2316	0/0:31,0:31:72.13:0,72,2407	0/0:35,0:35:81.14:0,81,2309	0/0:33,0:33:81.20:0,81,2821	0/0:18,0:18:42.07:0,42,1286	0/0:22,0:22:50.61:0,51,2021	0/0:30,0:30:75.13:0,75,2029	0/0:24,0:24:51.12:0,51,1784	0/0:36,0:36:90.22:0,90,3066	0/0:25,0:25:60.10:0,60,1585	0/0:20,0:20:42.12:0,42,1531	0/0:18,0:18:45.04:0,45,1355	0/0:20,0:20:48.11:0,48,1592	0/0:25,0:25:60.19:0,60,2326	0/0:32,0:32:69.15:0,69,2643	1/1:0,7:8:3.01:230,3,0
chr10	95919633	.	TCTCTCTC	T	481.24	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-2.488;DP=489;FS=3.271;HRun=0;HaplotypeScore=114.9698;InbreedingCoeff=0.0166;MQ=36.41;MQ0=33;MQRankSum=-4.489;QD=2.60;ReadPosRankSum=-9.656;VQSLOD=0.2630;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:24.95:0,25,739	0/0:10,0:9:11.07:0,11,223	0/0:30,0:8:11.46:0,11,223	0/0:42,0:6:7.16:0,7,260	0/1:22,0:20:34.87:35,0,197	0/0:12,0:12:15.02:0,15,380	0/0:13,0:12:14.54:0,15,423	1/1:9,8:13:28.77:410,29,0	0/0:14,0:10:10.26:0,10,402	0/0:21,0:20:46.53:0,47,1042	0/0:16,0:15:7.96:0,8,282	0/0:11,0:11:11.96:0,12,182	0/0:10,0:10:11.58:0,12,165	0/0:9,0:8:2.96:0,3,43	0/1:21,0:21:30.19:30,0,751	0/1:13,0:12:39.06:39,0,137	0/0:24,0:22:27.94:0,28,806	0/0:15,0:14:23.37:0,23,474	0/1:20,0:15:18.12:18,0,762	0/1:16,0:15:1.16:1,0,326	0/0:10,0:10:11.89:0,12,192	0/1:18,0:18:7.95:8,0,252	0/1:12,0:12:10.28:10,0,183	0/0:10,0:10:5.99:0,6,122	0/1:20,0:20:20.13:20,0,428	0/0:25,0:23:29.39:0,29,1408	0/1:23,0:20:34.34:34,0,487	1/1:3,0:2:3:25,3,0
chr10	95919635	.	TC	T	105.10	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=2.042;DP=480;FS=3.145;HRun=1;HaplotypeScore=95.3923;InbreedingCoeff=0.2725;MQ=33.76;MQ0=32;MQRankSum=-0.565;QD=6.18;ReadPosRankSum=-2.371;VQSLOD=-0.2072;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:27.03:0,27,338	0/0:10,0:9:8.55:0,9,112	0/0:27,1:7:15.02:0,15,195	0/0:39,0:5:9.03:0,9,133	0/0:20,0:18:4.57:0,5,69	0/0:13,0:13:15.05:0,15,217	0/0:14,0:13:14.54:0,15,219	1/1:14,3:13:2.36:181,2,0	0/0:14,0:10:18.05:0,18,217	0/0:22,0:21:54.13:0,54,710	0/0:17,0:16:11.01:0,11,143	0/0:9,0:9:8.99:0,9,103	0/0:11,0:11:8.85:0,9,103	0/0:10,0:9:2.90:0,3,31	0/0:21,0:21:29.90:0,30,388	0/0:13,0:12:8.61:0,9,102	0/0:24,0:22:28.63:0,29,343	0/0:14,0:13:21.02:0,21,249	0/0:21,0:16:39.12:0,39,531	0/0:15,0:14:12:0,12,156	0/0:8,0:8:5.03:0,5,68	0/0:18,0:18:8.97:0,9,129	0/0:12,0:12:5.81:0,6,91	0/0:10,0:10:5.97:0,6,67	0/0:18,0:18:11.81:0,12,154	0/0:26,0:24:59.57:0,60,809	0/0:24,0:21:23.84:0,24,322	./.
chr10	95920233	.	CCT	C	1250.08	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.395;DP=552;FS=4.423;HRun=0;HaplotypeScore=73.8228;InbreedingCoeff=0.9983;MQ=74.66;MQ0=1;MQRankSum=-9.452;QD=34.72;ReadPosRankSum=-0.267;VQSLOD=5.6058;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.29:0,96,1771	0/0:15,0:15:42.14:0,42,791	0/0:25,0:24:60.65:0,61,1101	0/0:18,0:16:38.84:0,39,735	0/0:20,0:20:60.21:0,60,1150	0/0:14,0:14:42.14:0,42,802	0/0:16,0:16:45.15:0,45,852	1/1:4,23:27:71.45:1019,71,0	0/0:19,0:19:57.18:0,57,1051	0/0:27,0:27:78.27:0,78,1499	0/0:10,0:10:30.10:0,30,543	0/0:19,0:19:57.20:0,57,1088	0/0:17,0:17:51.16:0,51,924	0/0:11,0:11:33.11:0,33,629	0/0:22,0:22:60.21:0,60,1149	0/0:15,0:15:45.14:0,45,830	0/0:22,0:22:60.19:0,60,1126	0/0:18,0:18:54.18:0,54,1022	0/0:20,0:20:60.15:0,60,1089	0/0:17,0:17:51.17:0,51,943	0/0:23,0:23:66.23:0,66,1237	0/0:26,0:26:78.27:0,78,1505	0/0:24,0:24:72.25:0,72,1389	0/0:24,0:24:72.23:0,72,1338	0/0:11,0:11:33.11:0,33,614	0/0:27,0:27:81.28:0,81,1546	0/0:24,0:23:72.22:0,72,1289	1/1:1,8:9:24.08:352,24,0
chr10	95920239	.	AT	A	648.38	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.851;DP=538;FS=6.888;HRun=9;HaplotypeScore=63.6078;InbreedingCoeff=0.9971;MQ=77.45;MQ0=1;MQRankSum=-7.305;QD=17.52;ReadPosRankSum=-1.493;VQSLOD=3.2779;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:27,2:29:56.76:0,57,895	0/0:13,0:13:36.08:0,36,396	0/0:23,0:23:56.48:0,56,565	0/0:16,0:14:30.52:0,31,308	0/0:19,0:19:51.13:0,51,566	0/0:15,0:16:41.96:0,42,465	0/0:15,0:15:30.09:0,30,346	1/1:13,16:29:65.59:551,66,0	0/0:18,0:18:51.11:0,51,558	0/0:23,0:23:63.18:0,63,720	0/0:10,0:10:30.07:0,30,330	0/0:18,0:18:51.11:0,51,567	0/0:18,0:18:45.12:0,45,511	0/0:12,0:12:30.09:0,30,346	0/0:22,0:22:66.15:0,66,739	0/0:17,1:18:26.67:0,27,549	0/0:22,0:22:63.16:0,63,714	0/0:21,0:21:60.18:0,60,691	0/0:21,0:21:57.16:0,57,649	0/0:15,0:15:45.13:0,45,519	0/0:22,0:23:56.99:0,57,628	0/0:25,0:25:60.18:0,60,693	0/0:22,0:22:63.18:0,63,719	0/0:21,0:21:60.17:0,60,683	0/0:11,0:11:33.10:0,33,381	0/0:27,0:27:75.21:0,75,855	0/0:22,0:21:60.18:0,60,691	1/1:0,8:8:24.01:218,24,0
chr10	95920908	.	A	ATG	2946.17	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.423;DP=1013;FS=5.372;HRun=0;HaplotypeScore=141.9800;InbreedingCoeff=0.9999;MQ=65.23;MQ0=0;MQRankSum=-7.038;QD=43.97;ReadPosRankSum=-3.100;VQSLOD=3.6724;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:78.24:0,78,1053	0/0:15,0:14:36.12:0,36,493	0/0:49,0:43:88.22:0,88,1269	0/0:36,0:33:58.15:0,58,779	0/0:33,0:33:84.25:0,84,1120	0/0:23,0:23:63.13:0,63,809	0/0:40,0:40:99:0,108,1349	1/1:3,45:48:99:2324,135,0	0/0:39,0:39:99:0,111,1490	0/0:41,0:41:99:0,120,1604	0/0:20,0:20:51.16:0,51,684	0/0:37,0:37:99:0,99,1325	0/0:45,0:45:99:0,126,1668	0/0:44,0:44:99:0,126,1680	0/0:49,0:49:99:0,138,1863	0/0:33,0:33:84.15:0,84,1017	0/0:22,0:22:57.13:0,57,744	0/0:26,0:26:72.20:0,72,954	0/0:34,0:34:66.18:0,66,857	0/0:51,0:51:99:0,144,1960	0/0:70,0:70:99:0,174,2297	0/0:38,0:38:81.27:0,81,1112	0/0:25,0:25:63.17:0,63,849	0/0:37,0:37:99:0,108,1358	0/0:19,0:19:48.16:0,48,658	0/0:45,0:45:99:0,123,1641	0/0:42,0:42:99:0,114,1515	1/1:3,16:19:42.14:744,42,0
chr10	95921057	.	GTGTGTATGTC	G	565.37	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=9.882;DP=1004;FS=0.000;HRun=0;HaplotypeScore=296.8051;InbreedingCoeff=0.6910;MQ=52.27;MQ0=16;MQRankSum=-8.110;QD=5.09;ReadPosRankSum=-3.855;VQSLOD=1.2297;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,10:30:1.05:45,1,0	0/0:14,0:14:33.11:0,33,1527	0/0:39,0:12:20.33:0,20,436	0/0:37,0:8:17.38:0,17,403	0/0:44,0:44:99:0,120,4419	0/0:19,0:19:40.73:0,41,1785	0/0:30,0:30:69.07:0,69,2906	0/1:37,0:31:99:157,0,245	0/0:41,0:41:88.14:0,88,4281	0/0:41,0:41:99:0,123,5180	0/0:29,0:29:81.24:0,81,3202	0/0:43,0:43:99:0,99,4198	0/0:40,0:40:96.24:0,96,3791	0/0:41,0:41:99:0,111,5144	0/0:50,0:49:99:0,114,5261	0/0:50,0:50:99:0,102,4895	1/1:12,0:12:10.85:100,11,0	1/1:18,1:19:36.92:333,37,0	0/0:37,0:29:76.85:0,77,2269	0/0:40,0:40:99:0,105,4323	0/0:100,0:93:99:0,199,8374	0/0:30,0:29:87.23:0,87,3520	0/0:28,0:28:78.25:0,78,3437	0/0:44,0:44:99:0,102,4273	0/0:18,0:18:54.18:0,54,2190	0/0:52,0:52:99:0,135,6093	0/0:26,0:26:57.11:0,57,2290	0/1:12,0:12:1.11:70,0,1
chr10	95921059	.	GTGTATGTC	G	1068.47	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=8.901;DP=1000;FS=2.120;HRun=0;HaplotypeScore=259.3302;InbreedingCoeff=0.5589;MQ=52.12;MQ0=19;MQRankSum=-7.790;QD=6.98;ReadPosRankSum=-4.618;VQSLOD=1.8831;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:1.10:45,1,0	0/0:13,0:13:33.11:0,33,1287	0/0:35,0:11:14.91:0,15,353	0/1:40,0:9:2.92:3,0,335	0/0:43,0:43:99:0,123,3955	0/0:19,0:19:41.20:0,41,1621	0/0:31,0:31:74.93:0,75,2588	0/1:39,0:33:93.18:93,0,315	0/0:41,0:41:64.37:0,64,3578	0/0:42,0:42:99:0,126,4561	0/0:29,0:29:81.22:0,81,2760	0/0:41,0:41:99:0,99,3641	0/0:39,0:39:94.30:0,94,3298	0/0:40,0:40:99:0,111,4348	0/0:49,0:48:99:0,120,4558	0/0:49,0:49:99:0,102,4208	1/1:10,2:12:13.37:231,13,0	1/1:15,4:19:33.33:811,33,0	0/0:38,0:29:79.38:0,79,2063	0/0:39,0:39:99:0,105,3743	0/0:101,0:94:99:0,201,7222	0/0:30,0:29:87.23:0,87,3066	0/0:28,0:28:81.26:0,81,2994	0/0:45,0:45:99:0,99,3723	0/0:18,0:18:53.97:0,54,1854	0/0:51,0:51:99:0,138,5276	0/0:26,0:26:57.09:0,57,1963	0/1:12,0:12:11.71:27,0,12
chr10	95921067	.	C	CTG	646.34	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=3.987;DP=976;FS=5.135;HRun=0;HaplotypeScore=167.7259;InbreedingCoeff=0.6430;MQ=53.91;MQ0=19;MQRankSum=-5.346;QD=6.21;ReadPosRankSum=-6.572;VQSLOD=1.1046;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:0:0,0,0	0/0:12,0:12:27.09:0,27,338	0/0:36,0:13:12.91:0,13,134	0/0:41,0:10:9:0,9,97	0/0:42,0:42:78.22:0,78,950	0/0:19,0:19:35.04:0,35,445	0/0:33,0:34:65.83:0,66,783	1/1:23,11:30:44.50:588,45,0	0/0:42,0:42:86.28:0,86,1038	0/0:41,0:41:99:0,99,1225	0/0:27,0:27:60.16:0,60,747	0/0:39,0:40:78.04:0,78,922	0/0:34,0:34:69.22:0,69,862	0/0:41,0:41:99:0,105,1293	0/0:47,0:46:99:0,117,1435	0/0:48,0:48:93.28:0,93,1149	0/1:13,0:13:5.92:11,0,6	0/1:19,0:19:19.89:29,0,20	0/0:34,0:24:41.13:0,41,540	0/0:37,0:37:81.23:0,81,987	0/0:102,1:96:99:0,110,1871	0/0:27,0:26:62.99:0,63,762	0/0:28,0:28:71.32:0,71,897	0/0:46,0:46:84.24:0,84,1028	0/0:19,0:19:42.13:0,42,525	0/0:46,0:46:99:0,126,1554	0/0:26,0:27:62.87:0,63,708	1/1:5,4:9:16.04:150,16,0
chr10	95921071	.	G	GTC	492.73	PASS	AB=0.917;AC=5;AF=0.089;AN=56;BaseQRankSum=4.944;DP=969;FS=4.117;HRun=0;HaplotypeScore=170.8487;InbreedingCoeff=0.1500;MQ=53.77;MQ0=21;MQRankSum=-3.778;QD=6.48;ReadPosRankSum=-2.450;VQSLOD=2.8266;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:4.41:0,4,37	0/0:11,0:11:27.09:0,27,406	0/0:42,0:13:20.97:0,21,243	0/0:46,0:13:23.88:0,24,244	0/0:35,0:35:96.22:0,96,1331	0/0:18,0:19:43.36:0,43,602	0/0:35,0:35:80.98:0,81,1097	0/1:27,6:28:44.50:511,0,45	0/0:38,0:38:99:0,99,1407	0/0:40,0:40:99:0,120,1698	0/0:26,0:26:71.98:0,72,1002	0/0:42,0:42:99:0,111,1424	0/0:32,0:32:81.20:0,81,1148	0/0:40,0:40:99:0,111,1649	0/0:46,0:46:99:0,123,1830	0/0:50,0:49:99:0,105,1509	0/1:14,0:14:7.21:7,0,42	0/1:17,0:19:31.18:31,0,102	0/0:33,0:24:68.84:0,69,851	0/0:33,0:33:99:0,99,1383	0/0:101,0:93:99:0,163,2577	0/0:27,0:26:75.20:0,75,1070	0/0:28,0:28:83.24:0,83,1175	0/0:47,0:47:88.99:0,89,1449	0/0:18,0:18:54.13:0,54,741	0/0:49,0:49:99:0,144,2070	0/0:25,0:26:72.03:0,72,999	1/1:10,0:10:0.17:49,0,0
chr10	95921105	.	CTA	C	614.40	PASS	AB=0.717;AC=5;AF=0.089;AN=56;BaseQRankSum=7.683;DP=998;FS=0.000;HRun=0;HaplotypeScore=231.3393;InbreedingCoeff=0.3430;MQ=53.77;MQ0=19;MQRankSum=-8.941;QD=7.49;ReadPosRankSum=-1.803;VQSLOD=2.9458;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,5:47:36.12:0,36,506	0/0:9,1:10:21:0,21,306	0/0:51,0:17:39.51:0,40,520	0/0:65,0:22:34.69:0,35,576	0/0:35,0:35:90.21:0,90,1456	0/0:12,0:12:22.19:0,22,442	0/0:34,0:34:80.99:0,81,1275	1/1:10,2:19:34.91:275,35,0	0/0:35,6:41:99:0,99,1621	0/0:42,1:41:99:0,116,1931	0/0:13,0:13:30.44:0,30,436	0/0:34,1:35:68.93:0,69,1150	0/0:32,0:32:79.86:0,80,1294	0/0:41,0:41:99:0,99,1728	0/0:43,7:48:99:0,115,1752	0/0:44,4:47:77.96:0,78,1333	0/1:16,6:22:99:181,0,215	0/1:20,5:25:99:171,0,564	0/0:30,1:24:38.52:0,39,935	0/0:30,4:34:84.39:0,84,1417	0/0:85,1:80:99:0,156,2571	0/0:28,0:28:63.13:0,63,1108	0/0:28,0:28:61.74:0,62,1264	0/0:43,0:43:84.21:0,84,1441	0/0:18,1:19:51.14:0,51,857	0/0:53,5:57:91.94:0,92,2148	0/0:31,0:30:81.17:0,81,1412	0/1:1,0:8:19.77:112,0,20
chr10	95921121	.	CTG	C	373.48	PASS	AB=0.973;AC=7;AF=0.125;AN=56;BaseQRankSum=6.650;DP=1021;FS=9.123;HRun=0;HaplotypeScore=281.4947;InbreedingCoeff=0.2584;MQ=49.42;MQ0=26;MQRankSum=-0.209;QD=1.94;ReadPosRankSum=-0.069;VQSLOD=1.0302;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:55,0:53:29.97:186,30,0	0/0:9,0:9:2.99:0,3,32	0/0:28,0:7:8.06:0,8,102	0/0:45,0:15:13.28:0,13,71	0/0:36,0:35:14.58:0,15,262	0/0:15,0:15:22.16:0,22,246	0/0:38,0:37:61.90:0,62,940	0/0:33,0:19:11.61:0,12,64	0/0:43,0:43:50.95:0,51,515	0/0:42,0:39:95.08:0,95,1361	0/0:15,0:15:17.95:0,18,244	0/0:35,1:36:52.45:0,52,677	0/1:40,0:40:1.43:1,0,622	0/0:39,0:39:62.27:0,62,864	0/0:48,0:46:33.81:0,34,335	0/0:54,0:54:31.09:0,31,425	0/1:31,0:31:22.19:157,0,22	0/1:29,0:29:62.84:140,0,63	0/1:28,1:24:8.08:8,0,180	0/0:37,0:36:12.60:0,13,258	0/0:83,0:74:25.55:0,26,425	0/0:30,1:31:9.29:0,9,597	0/0:33,0:33:65.13:0,65,860	0/0:42,0:40:66.17:0,66,1013	0/0:21,0:19:12.22:0,12,251	0/0:61,0:60:48.20:0,48,753	0/0:38,0:37:32.22:0,32,517	0/1:8,1:9:1.75:3,0,2
chr10	95921133	.	GTC	G	3530.65	PASS	AB=0.921;AC=20;AF=0.357;AN=56;BaseQRankSum=5.537;DP=952;FS=0.710;HRun=0;HaplotypeScore=253.5155;InbreedingCoeff=-0.0511;MQ=47.22;MQ0=28;MQRankSum=-0.147;QD=5.49;ReadPosRankSum=-7.554;VQSLOD=1.2289;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:9,46:53:33.06:446,33,0	0/0:6,0:6:2.47:0,2,9	0/0:11,0:3:5.95:0,6,42	0/1:27,0:6:2.30:2,0,12	0/1:34,0:33:15.85:196,0,16	0/0:16,0:16:7.75:0,8,164	0/0:38,0:37:11.38:0,11,628	0/1:28,0:12:10.17:130,0,10	0/1:37,0:37:83.28:163,0,83	0/0:41,0:38:75.60:0,76,1149	0/0:16,0:16:17.86:0,18,160	0/0:41,0:41:24.25:0,24,555	0/1:38,0:38:19.26:19,0,469	0/0:30,0:30:53.14:0,53,610	0/1:49,0:47:1.08:296,0,1	0/1:56,3:58:50.42:56,0,50	0/1:8,25:33:2.59:344,0,3	0/1:10,20:30:20.30:343,0,20	1/1:25,0:19:12.40:132,12,0	0/1:25,1:25:19.29:151,0,19	0/1:72,2:65:22.47:388,0,22	0/0:32,0:31:24.57:0,25,527	0/0:33,0:33:48.79:0,49,632	0/0:41,0:39:60.06:0,60,808	0/1:20,1:19:15.11:133,0,15	0/1:56,2:56:99:420,0,118	0/1:39,1:39:77:246,0,77	1/1:7,0:7:2.21:65,2,0
chr10	95921135	.	CTCTG	C	3631.07	PASS	AB=0.903;AC=18;AF=0.321;AN=56;BaseQRankSum=7.256;DP=940;FS=6.222;HRun=0;HaplotypeScore=272.7289;InbreedingCoeff=-0.2406;MQ=47.24;MQ0=29;MQRankSum=-0.882;QD=5.71;ReadPosRankSum=-5.873;VQSLOD=0.5668;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:54,0:53:26.91:102,27,0	0/0:2,4:6:0.47:0,0,1	0/0:12,0:3:5.95:0,6,42	0/1:23,0:6:1.67:10,0,2	0/1:33,2:34:54.14:181,0,54	0/0:16,0:16:19.94:0,20,290	0/0:38,0:36:25.75:0,26,926	0/1:29,2:13:80.62:247,0,81	0/1:35,2:37:99:296,0,147	0/0:38,0:35:78.28:0,78,1586	0/0:17,0:17:22.92:0,23,223	0/0:41,0:41:27.70:0,28,821	0/1:39,0:39:0.40:0,0,692	0/0:31,0:31:53.70:0,54,775	0/1:45,4:47:99:416,0,111	0/1:28,30:57:99:165,0,131	0/1:34,0:34:44.04:44,0,53	0/1:28,1:29:16.06:73,0,16	0/1:12,10:16:22.17:231,0,22	0/1:25,1:25:60.91:99,0,61	0/1:71,2:64:80.29:410,0,80	0/0:32,0:31:23.48:0,23,764	0/0:32,0:31:59.96:0,60,922	0/0:41,0:39:60.06:0,60,1047	0/1:19,1:18:14.96:176,0,15	0/1:53,4:55:99:676,0,224	0/1:36,3:38:99:434,0,132	0/1:4,1:7:34.20:71,0,34
chr10	95921137	.	CTG	C	1200.68	PASS	AB=0.975;AC=18;AF=0.346;AN=52;BaseQRankSum=4.540;DP=946;FS=0.000;HRun=0;HaplotypeScore=263.6387;InbreedingCoeff=-0.3922;MQ=46.28;MQ0=29;MQRankSum=-2.082;QD=1.86;ReadPosRankSum=-3.482;VQSLOD=1.5498;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:54,0:52:29.50:185,29,0	0/0:6,0:6:2.99:0,3,31	./.	./.	0/0:33,1:33:21.01:0,21,226	0/1:14,1:15:20.84:21,0,90	0/1:40,1:40:19.74:20,0,383	0/1:33,0:16:13.30:13,0,83	0/1:37,1:38:97.85:98,0,400	0/0:38,1:36:33.29:0,33,816	0/0:17,0:17:6.22:0,6,64	0/0:41,1:42:5.63:0,6,434	0/1:42,1:43:34.94:35,0,321	0/0:30,1:31:26.16:0,26,306	0/1:48,0:46:80.51:81,0,264	0/1:54,1:54:86.38:86,0,273	0/1:39,0:39:99:120,0,149	0/1:30,0:30:61.39:115,0,61	0/1:22,0:15:78.17:78,0,111	0/0:24,0:23:7.08:0,7,205	0/1:74,0:65:38.60:39,0,347	0/0:29,1:30:18.92:0,19,376	0/1:30,2:31:5.70:6,0,320	0/0:42,0:40:33.03:0,33,479	0/1:19,0:17:53.05:53,0,162	0/1:55,2:55:99:177,0,481	0/1:38,1:38:99:192,0,382	0/1:6,1:7:29.88:38,0,30
chr10	95921155	.	G	GTGTGTGTC	5652.45	PASS	AB=0.808;AC=40;AF=0.741;AN=54;BaseQRankSum=-2.464;DP=990;FS=22.569;HRun=0;HaplotypeScore=325.3744;InbreedingCoeff=0.5327;MQ=49.20;MQ0=22;MQRankSum=2.256;QD=6.39;ReadPosRankSum=-0.290;VQSLOD=2.2708;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:56,0:56:99:108,0,147	1/1:9,0:9:8.70:63,9,0	0/0:8,0:3:8.98:0,9,73	0/0:17,0:10:19.66:0,20,145	1/1:31,0:30:15.86:118,16,0	0/1:5,9:19:0:0,0,0	1/1:43,0:41:32.16:401,32,0	0/0:39,0:26:15.69:0,16,240	1/1:40,0:40:38.65:323,39,0	1/1:17,18:35:46.21:762,46,0	0/1:7,13:20:0.12:1,0,0	1/1:15,29:51:9.03:295,9,0	1/1:11,26:43:18.06:540,18,0	./.	1/1:49,0:48:38.03:319,38,0	1/1:59,0:58:59.91:538,60,0	0/1:46,0:46:99:199,0,109	0/1:25,0:25:26.03:26,0,89	1/1:30,0:20:29.30:205,29,0	1/1:26,0:25:20.90:164,21,0	1/1:63,0:55:29.16:277,29,0	1/1:17,18:36:0.47:1,0,0	0/1:14,11:27:0:0,0,0	1/1:21,0:52:6.01:115,6,0	1/1:28,0:25:20.93:171,21,0	1/1:54,0:52:67.05:650,67,0	1/1:37,0:36:46.63:377,47,0	0/0:9,0:9:11.02:0,11,87
chr10	95921726	.	TG	T	753.41	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.725;DP=823;FS=0.705;HRun=7;HaplotypeScore=81.1052;InbreedingCoeff=0.9974;MQ=83.58;MQ0=0;MQRankSum=0.839;QD=19.83;ReadPosRankSum=-1.506;VQSLOD=2.8547;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.22:0,87,1039	0/0:9,0:9:27.09:0,27,340	0/0:20,0:20:54.16:0,54,651	0/0:32,1:33:69.87:0,70,821	0/0:23,0:23:63.17:0,63,758	0/0:20,0:20:51.15:0,51,630	0/0:27,0:27:78.25:0,78,981	1/1:5,23:28:66.12:660,66,0	0/0:31,0:31:84.27:0,84,1056	0/0:41,0:41:99:0,105,1307	0/0:19,0:19:51.13:0,51,604	0/0:43,0:43:99:0,105,1284	0/0:43,0:43:99:0,123,1535	0/0:32,0:32:90.27:0,90,1118	0/0:36,0:36:99:0,102,1234	0/0:36,0:36:99:0,108,1346	0/0:29,0:29:84.24:0,84,1040	0/0:24,0:24:66.19:0,66,814	0/0:24,0:24:63.17:0,63,755	0/0:23,0:23:66.20:0,66,817	0/0:84,0:84:99:0,235,2930	0/0:25,0:25:72.22:0,72,892	0/0:24,0:24:63.19:0,63,779	0/0:27,0:27:78.25:0,78,981	0/0:25,0:25:63.19:0,63,770	0/0:26,0:26:69.20:0,69,835	0/0:28,0:28:72.15:0,72,872	1/1:1,9:10:21.05:214,21,0
chr10	95922166	.	TG	T	1528.56	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.897;DP=797;FS=0.589;HRun=1;HaplotypeScore=104.7303;InbreedingCoeff=0.9975;MQ=79.98;MQ0=0;MQRankSum=-1.562;QD=37.28;ReadPosRankSum=-2.999;VQSLOD=2.6659;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,148,2350	0/0:11,0:11:30.10:0,30,480	0/0:24,0:23:69.16:0,69,1001	0/0:27,0:27:66.21:0,66,960	0/0:30,0:30:87.30:0,87,1381	0/0:27,0:27:81.28:0,81,1290	0/0:31,0:31:93.32:0,93,1485	1/1:0,34:34:99:1356,102,0	0/0:35,0:35:99:0,105,1667	0/0:27,0:27:81.28:0,81,1295	0/0:17,0:17:51.17:0,51,810	0/0:41,0:41:99:0,123,1964	0/0:33,0:33:99:0,99,1581	0/0:33,0:33:99:0,99,1579	0/0:31,0:31:93.32:0,93,1482	0/0:41,0:41:99:0,123,1967	0/0:30,0:30:90.31:0,90,1438	0/0:27,0:27:81.26:0,81,1262	0/0:23,0:23:66.23:0,66,1055	0/0:14,0:14:42.14:0,42,669	0/0:74,0:74:99:0,223,3495	0/0:17,0:17:51.16:0,51,793	0/0:12,0:12:33.09:0,33,496	0/0:25,0:25:72.25:0,72,1148	0/0:21,0:21:63.21:0,63,1007	0/0:34,0:34:99:0,102,1617	0/0:21,0:21:63.21:0,63,1004	1/1:0,7:7:21.07:294,21,0
chr10	95922830	.	TTGTGTG	T	5795.95	PASS	AB=0.727;AC=33;AF=0.611;AN=54;BaseQRankSum=3.512;DP=659;FS=34.778;HRun=0;HaplotypeScore=164.6161;InbreedingCoeff=0.1157;MQ=71.03;MQ0=7;MQRankSum=-3.038;QD=11.06;ReadPosRankSum=0.820;VQSLOD=2.7807;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:27:18.06:252,18,0	1/1:2,7:9:9.03:184,9,0	0/0:31,0:22:2.50:0,2,9	0/0:29,0:26:11.93:0,12,112	0/1:13,2:18:5.95:114,0,6	1/1:13,1:21:9.54:91,10,0	0/1:17,0:24:18.97:19,0,46	0/0:19,0:21:14.75:0,15,108	1/1:12,15:28:42.12:796,42,0	0/0:11,0:21:9.96:0,10,152	0/0:12,0:15:0.16:0,0,7	0/1:16,3:26:15.26:200,0,15	0/1:12,0:19:0.79:1,0,23	1/1:9,0:22:8.02:18,8,0	0/1:12,8:20:4.10:229,0,4	1/1:19,24:44:55.70:1051,56,0	./.	1/1:6,0:15:6.02:84,6,0	1/1:6,6:12:16.30:310,16,0	0/1:7,18:25:6.78:459,0,7	0/1:42,0:42:56.78:189,0,57	1/1:7,0:14:6.76:68,7,0	1/1:11,1:17:2.85:81,3,0	0/1:13,0:28:7.59:8,0,25	0/1:13,11:25:1.90:544,0,2	1/1:19,9:31:16.88:507,17,0	0/1:17,15:35:5.78:559,0,6	0/1:13,0:21:31.56:34,0,32
chr10	95923459	.	GA	G	455.03	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.201;DP=414;FS=3.052;HRun=8;HaplotypeScore=45.2135;InbreedingCoeff=0.9178;MQ=75.55;MQ0=1;MQRankSum=-3.897;QD=15.17;ReadPosRankSum=-1.931;VQSLOD=2.9041;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.18:0,60,725	0/0:2,0:2:6.02:0,6,72	0/0:14,0:14:27.08:0,27,323	0/0:13,0:13:26.05:0,26,284	0/0:29,0:29:81.25:0,81,978	0/0:23,0:23:63.18:0,63,750	0/0:20,0:20:60.18:0,60,725	1/1:8,15:22:40.29:373,40,0	0/0:8,0:8:24.07:0,24,290	0/0:16,0:16:39.09:0,39,447	0/0:30,0:30:72.22:0,72,870	0/0:9,0:9:24.07:0,24,289	0/0:8,0:8:21.06:0,21,246	0/0:9,0:9:24.07:0,24,290	0/0:9,0:9:24.07:0,24,290	0/0:7,0:7:15.05:0,15,181	0/0:34,0:34:87.25:0,87,1039	0/0:20,0:20:60.18:0,60,724	0/0:8,0:8:15.05:0,15,181	0/0:13,0:13:30.09:0,30,362	0/0:10,0:10:19.30:0,19,220	0/0:9,0:9:27.07:0,27,314	0/0:16,0:16:36.11:0,36,435	0/0:7,0:7:18.06:0,18,217	0/0:12,0:12:33.09:0,33,390	0/0:17,0:17:48.14:0,48,570	0/0:18,0:18:51.16:0,51,616	1/1:0,7:7:21.03:203,21,0
chr10	95923560	.	C	CAAAAAAAAAAA	15424.08	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=10.317;DP=444;FS=13.027;HRun=8;HaplotypeScore=146.4638;InbreedingCoeff=0.9726;MQ=61.61;MQ0=9;MQRankSum=-13.227;QD=58.20;ReadPosRankSum=-5.987;VQSLOD=-0.1573;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:26:48.16:1364,48,0	1/1:2,0:9:9.03:385,9,0	0/0:9,0:9:23.61:0,24,444	0/0:15,0:11:15.11:0,15,484	1/1:17,7:31:54.19:2196,54,0	0/0:29,0:29:81.18:0,81,2152	0/0:14,0:14:42.14:0,42,1148	1/1:27,0:23:44.55:430,45,0	1/1:12,0:12:30.10:939,30,0	0/0:18,0:18:41.85:0,42,1008	0/0:13,0:13:39.13:0,39,1059	0/0:13,0:13:33.08:0,33,907	0/0:12,0:12:33.11:0,33,919	0/0:17,0:16:33.04:0,33,942	1/1:10,0:8:18:558,18,0	1/1:14,0:14:30.10:1110,30,0	1/1:9,0:22:36.12:1120,36,0	1/1:4,0:11:27.09:926,27,0	1/1:16,1:16:36.11:984,36,0	1/1:8,0:15:15.05:518,15,0	1/1:3,1:7:9.03:363,9,0	0/0:6,0:5:12.02:0,12,342	0/0:14,0:14:36:0,36,993	0/0:19,0:18:51.14:0,51,1395	1/1:14,1:15:42.14:1473,42,0	1/1:17,0:15:39.13:1463,39,0	1/1:19,0:18:36.12:1205,36,0	1/1:9,0:9:20.80:391,21,0
chr10	95923818	.	TA	T	4695.29	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-3.905;DP=494;FS=3.145;HRun=8;HaplotypeScore=68.5277;InbreedingCoeff=0.9914;MQ=69.94;MQ0=0;MQRankSum=-1.753;QD=24.08;ReadPosRankSum=1.012;VQSLOD=5.7178;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.08:0,60,692	1/1:0,8:7:18.03:174,18,0	0/0:14,0:13:28.55:0,29,355	0/0:14,0:12:13.53:0,14,218	1/1:1,25:26:66.02:624,66,0	0/0:1,0:22:57.50:0,58,292	0/0:1,0:8:17.37:0,17,98	0/0:35,0:35:93.27:0,93,1104	1/1:1,18:19:48.08:463,48,0	0/0:4,0:18:40.22:0,40,205	0/0:1,0:21:57.50:0,58,292	0/0:2,0:11:20.13:0,20,102	0/0:1,0:17:43.09:0,43,219	0/0:4,0:13:22.97:0,23,117	1/1:2,9:11:27.04:261,27,0	1/1:2,12:14:30.04:290,30,0	0/0:20,0:20:57.16:0,57,675	0/0:29,0:29:75.20:0,75,891	1/1:1,24:25:72.09:684,72,0	1/1:2,13:15:36.06:347,36,0	1/1:0,8:8:21.03:203,21,0	0/0:2,0:10:20.19:0,20,106	0/0:2,0:21:48.81:0,49,248	0/0:1,0:10:25.88:0,26,132	1/1:0,17:17:45.07:434,45,0	1/1:4,22:28:42.60:607,43,0	1/1:2,22:24:63.09:608,63,0	0/0:15,0:15:39.06:0,39,432
chr10	95923947	.	C	CT	5934.68	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=12.631;DP=559;FS=2.051;HRun=7;HaplotypeScore=70.6270;InbreedingCoeff=0.9903;MQ=71.03;MQ0=4;MQRankSum=-1.820;QD=28.53;ReadPosRankSum=1.686;VQSLOD=5.6590;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.11:0,69,666	1/1:2,8:10:21.06:253,21,0	0/0:26,0:19:40.75:0,41,331	0/0:25,0:20:33.81:0,34,364	1/1:4,24:28:63.19:761,63,0	0/0:20,0:20:54.09:0,54,521	0/0:14,0:14:39.06:0,39,376	0/0:23,0:23:54.08:0,54,521	1/1:1,17:18:48.15:580,48,0	0/0:23,0:23:63.10:0,63,605	0/0:24,0:24:63.10:0,63,608	0/0:22,0:22:60.07:0,60,571	0/0:20,0:20:60.10:0,60,579	0/0:25,0:25:66.10:0,66,637	1/1:1,11:12:33.10:398,33,0	1/1:2,8:10:21.06:254,21,0	0/0:24,0:24:60.08:0,60,577	0/0:21,0:21:54.08:0,54,521	1/1:4,16:20:48.15:580,48,0	1/1:2,14:16:39.12:468,39,0	1/1:3,16:19:48.15:577,48,0	0/0:19,0:19:57.07:0,57,540	0/0:12,0:12:30.05:0,30,290	0/0:19,0:19:48.08:0,48,463	1/1:5,18:23:48.15:580,48,0	1/1:1,27:28:78.24:942,78,0	1/1:7,17:24:45.14:542,45,0	0/0:9,0:9:9.01:0,9,87
chr10	95924170	.	T	TC	4015.60	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-13.963;DP=790;FS=7.312;HRun=2;HaplotypeScore=86.0626;InbreedingCoeff=0.9970;MQ=84.53;MQ0=0;MQRankSum=-4.489;QD=37.88;ReadPosRankSum=1.583;VQSLOD=4.0864;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,46:47:99:1899,132,0	0/0:14,0:14:42.13:0,42,521	0/0:19,0:19:34.61:0,35,496	0/0:28,0:28:73.71:0,74,829	0/0:36,0:36:99:0,105,1276	0/0:14,0:14:42.09:0,42,503	0/0:40,0:40:99:0,111,1351	0/0:27,0:27:78.21:0,78,943	0/0:26,0:26:72.21:0,72,879	0/0:26,0:26:72.22:0,72,883	0/0:18,0:18:54.16:0,54,657	0/0:28,0:28:81.24:0,81,991	0/0:32,0:32:96.29:0,96,1178	0/0:33,0:33:96.30:0,96,1189	0/0:29,0:29:81.23:0,81,981	0/0:26,0:26:75.23:0,75,919	1/1:0,25:25:63.21:907,63,0	1/1:0,34:34:84.28:1209,84,0	0/0:23,0:23:66.19:0,66,806	0/0:26,0:26:78.25:0,78,966	0/0:80,0:80:99:0,229,2815	0/0:21,0:21:63.20:0,63,780	0/0:20,0:20:54.15:0,54,656	0/0:37,0:37:99:0,99,1227	0/0:23,0:23:66.21:0,66,818	0/0:27,0:27:78.23:0,78,947	0/0:25,0:25:75.24:0,75,930	0/0:6,0:6:18.06:0,18,223
chr10	95924771	.	CAA	C	526.58	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.972;DP=621;FS=0.858;HRun=4;HaplotypeScore=88.3326;InbreedingCoeff=0.9935;MQ=71.41;MQ0=1;MQRankSum=-4.695;QD=26.33;ReadPosRankSum=-0.692;VQSLOD=1.9891;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,150,2661	0/0:7,0:7:21.07:0,21,392	0/0:25,0:20:52.06:0,52,919	0/0:24,0:22:51.95:0,52,741	0/0:16,0:16:42.11:0,42,667	0/0:19,0:19:51.15:0,51,907	0/0:27,0:27:78.25:0,78,1365	1/1:7,7:14:35.36:398,35,0	0/0:26,0:26:78.13:0,78,1398	0/0:23,0:23:63.21:0,63,1123	0/0:30,0:30:87.25:0,87,1536	0/0:18,0:18:48.16:0,48,870	0/0:32,0:32:96.29:0,96,1630	0/0:17,0:17:51.17:0,51,950	0/0:18,0:18:54.18:0,54,983	0/0:15,0:15:45.15:0,45,793	0/0:35,0:35:99:0,102,1850	0/0:25,0:25:72.25:0,72,1333	0/0:25,0:25:75.23:0,75,1343	0/0:23,0:23:69.19:0,69,1138	0/0:36,0:36:99:0,108,1943	0/0:17,0:17:51.15:0,51,866	0/0:20,0:20:60.16:0,60,1067	0/0:24,0:24:72.25:0,72,1318	0/0:11,0:11:33.11:0,33,611	0/0:20,0:20:57.20:0,57,1053	0/0:17,0:17:51.17:0,51,934	1/1:0,6:6:18.06:248,18,0
chr10	95924778	.	AAG	A	856.11	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.938;DP=603;FS=0.000;HRun=0;HaplotypeScore=82.6890;InbreedingCoeff=0.9967;MQ=70.66;MQ0=0;MQRankSum=-3.643;QD=35.67;ReadPosRankSum=-2.881;VQSLOD=4.9790;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,150,2984	0/0:8,0:8:24.08:0,24,483	0/0:24,0:20:56.55:0,57,1065	0/0:21,0:19:49.28:0,49,887	0/0:14,0:14:39.13:0,39,756	0/0:16,0:16:48.16:0,48,964	0/0:26,0:26:78.27:0,78,1556	1/1:4,13:17:49.85:657,50,0	0/0:25,0:25:75.24:0,75,1487	0/0:24,0:24:72.25:0,72,1458	0/0:26,0:26:78.27:0,78,1582	0/0:17,0:17:51.17:0,51,1020	0/0:30,0:30:90.29:0,90,1778	0/0:16,0:16:48.16:0,48,964	0/0:19,0:19:57.20:0,57,1147	0/0:15,0:15:45.15:0,45,914	0/0:32,0:32:96.33:0,96,1934	0/0:25,0:25:75.26:0,75,1488	0/0:25,0:25:75.26:0,75,1484	0/0:20,0:20:60.21:0,60,1218	0/0:37,0:37:99:0,111,2242	0/0:17,0:17:51.17:0,51,1021	0/0:18,0:18:54.19:0,54,1096	0/0:26,0:26:78.27:0,78,1558	0/0:11,0:11:33.11:0,33,670	0/0:20,0:20:57.19:0,57,1124	0/0:16,0:16:48.16:0,48,973	1/1:1,6:7:21.07:320,21,0
chr10	95924954	.	CT	C	9153.91	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=13.943;DP=672;FS=4.854;HRun=2;HaplotypeScore=66.5846;InbreedingCoeff=0.9603;MQ=69.36;MQ0=0;MQRankSum=-1.935;QD=34.81;ReadPosRankSum=3.464;VQSLOD=5.3341;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,2048	1/1:1,5:6:15.05:194,15,0	0/0:13,0:13:39.10:0,39,561	0/0:20,0:20:57.15:0,57,829	1/1:1,18:19:51.12:642,51,0	0/0:23,0:23:69.18:0,69,1008	0/0:26,0:26:75.25:0,75,1122	0/0:30,0:30:90.30:0,90,1331	1/1:1,29:30:90.03:1141,90,0	0/0:15,0:15:45.15:0,45,657	0/0:13,0:13:39.12:0,39,564	0/0:31,0:31:93.31:0,93,1373	0/0:35,0:35:99:0,105,1574	0/0:25,0:25:72.24:0,72,1075	1/1:0,32:32:90.29:1168,90,0	1/1:0,27:27:63.20:818,63,0	0/0:32,0:32:93.26:0,93,1331	0/0:22,0:22:66.22:0,66,987	1/1:0,22:22:66.18:815,66,0	1/1:0,19:19:54.17:695,54,0	1/1:0,42:42:99:1441,111,0	0/0:17,0:17:48.13:0,48,677	0/0:19,0:19:57.18:0,57,833	0/0:33,0:33:93.28:0,93,1352	1/1:1,26:27:72.23:934,72,0	1/1:1,15:16:0.16:487,0,0	1/1:1,22:23:63.20:818,63,0	0/0:8,0:8:24.08:0,24,360
chr10	95925435	.	CT	C	1820.59	PASS	AB=0.895;AC=23;AF=0.411;AN=56;BaseQRankSum=-2.794;DP=322;FS=7.626;HRun=12;HaplotypeScore=80.6936;InbreedingCoeff=0.8502;MQ=65.63;MQ0=1;MQRankSum=0.437;QD=12.82;ReadPosRankSum=0.366;VQSLOD=3.4005;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:20:32.62:0,33,166	1/1:0,5:5:14.94:116,15,0	0/0:8,0:8:17.81:0,18,153	0/0:6,0:6:11.98:0,12,107	1/1:4,15:19:44.80:348,45,0	0/0:3,0:3:5.98:0,6,51	0/1:15,2:17:7.39:7,0,294	0/0:22,0:23:32.47:0,32,291	1/1:1,5:6:17.82:131,18,0	0/0:9,0:9:15.02:0,15,148	0/0:14,0:14:24.05:0,24,244	0/0:8,0:8:20.85:0,21,188	0/0:5,0:5:8.97:0,9,74	0/0:1,0:1:3.01:0,3,30	1/1:4,8:12:20.89:162,21,0	1/1:2,7:9:23.19:171,23,0	0/0:5,0:25:63.19:0,63,341	0/0:3,0:14:22.73:0,23,115	1/1:12,10:22:4.44:207,4,0	1/1:1,8:9:23.90:186,24,0	1/1:2,9:11:29.80:225,30,0	0/0:12,0:12:33.07:0,33,335	0/0:14,0:14:33.07:0,33,335	0/0:9,0:9:24.05:0,24,244	1/1:3,7:10:18.23:158,18,0	1/1:3,10:13:30.33:231,30,0	1/1:3,5:8:11.95:93,12,0	0/0:7,0:7:20.96:0,21,199
chr10	95926433	.	TTGG	T	15497.21	PASS	AC=30;AF=0.556;AN=54;BaseQRankSum=13.969;DP=654;FS=11.911;HRun=0;HaplotypeScore=107.5656;InbreedingCoeff=0.9968;MQ=76.43;MQ0=0;MQRankSum=-5.812;QD=41.55;ReadPosRankSum=4.430;VQSLOD=5.6984;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:42:99:1852,105,0	1/1:1,12:13:30.10:529,30,0	0/0:29,0:29:78.26:0,78,1665	0/0:25,0:25:67.97:0,68,1447	1/1:1,25:26:54.16:952,54,0	0/0:33,0:33:99:0,99,2311	0/0:23,0:23:66.23:0,66,1534	1/1:3,29:32:87.28:1493,87,0	1/1:0,21:21:57.20:1005,57,0	0/0:30,0:30:81.28:0,81,1884	0/0:14,0:14:42.14:0,42,948	0/0:30,0:30:84.29:0,84,1967	0/0:20,0:20:60.16:0,60,1280	0/0:17,0:17:51.18:0,51,1181	1/1:0,18:18:48.16:846,48,0	1/1:1,18:19:51.17:900,51,0	1/1:2,20:22:51.17:900,51,0	1/1:1,17:18:39.13:688,39,0	1/1:1,16:16:45.14:764,45,0	1/1:1,29:30:63.13:1043,63,0	1/1:0,41:41:72.24:1270,72,0	0/0:13,0:13:39.12:0,39,812	0/0:15,0:15:42.14:0,42,970	0/0:32,0:32:96.33:0,96,2221	1/1:1,22:23:60.21:1058,60,0	1/1:1,29:30:13.62:1353,14,0	1/1:2,19:21:48.16:845,48,0	./.
chr10	95927875	.	T	TGGTCC	7385.92	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.644;DP=770;FS=10.075;HRun=0;HaplotypeScore=147.2409;InbreedingCoeff=0.9997;MQ=78.37;MQ0=0;MQRankSum=-7.706;QD=67.14;ReadPosRankSum=1.920;VQSLOD=5.6755;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,32:38:87.25:2483,87,0	0/0:11,0:11:33.11:0,33,649	0/0:20,0:20:51.17:0,51,949	0/0:20,0:20:48.16:0,48,964	0/0:12,0:12:30.09:0,30,584	0/0:25,0:25:63.22:0,63,1305	0/0:44,0:44:99:0,126,2423	0/0:17,0:17:48.16:0,48,980	0/0:28,0:28:75.26:0,75,1537	0/0:30,0:30:84.28:0,84,1660	0/0:27,0:27:72.23:0,72,1448	0/0:31,0:31:87.30:0,87,1803	0/0:29,0:29:78.27:0,78,1584	0/0:36,0:36:96.32:0,96,1952	0/0:31,0:31:81.26:0,81,1642	0/0:21,0:21:63.22:0,63,1306	1/1:7,30:41:90.31:2691,90,0	1/1:3,25:31:72.25:2211,72,0	0/0:18,0:18:48.16:0,48,994	0/0:22,0:22:57.20:0,57,1182	0/0:72,0:72:99:0,202,4085	0/0:21,0:21:54.17:0,54,1083	0/0:17,0:17:48.14:0,48,920	0/0:31,0:31:93.27:0,93,1831	0/0:29,0:29:84.29:0,84,1741	0/0:32,0:32:90.30:0,90,1830	0/0:24,0:24:69.19:0,69,1335	0/0:12,0:12:36.12:0,36,746
chr10	95928077	.	GCACGCACA	G	895.25	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.848;DP=827;FS=5.238;HRun=0;HaplotypeScore=200.6681;InbreedingCoeff=0.9638;MQ=63.26;MQ0=3;MQRankSum=0.393;QD=22.38;ReadPosRankSum=-3.739;VQSLOD=2.5314;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,102,3277	0/0:12,0:12:27.09:0,27,1030	0/0:24,0:17:29.50:0,29,697	0/0:21,0:18:28.31:0,28,767	0/0:14,0:14:42.14:0,42,1606	0/0:32,0:32:81.28:0,81,3167	0/0:34,0:34:84.27:0,84,3023	1/1:4,23:25:58.67:767,59,0	0/0:38,0:38:96.27:0,96,3352	0/0:34,0:34:84.28:0,84,2906	0/0:8,0:8:18.05:0,18,555	0/0:44,0:44:99:0,117,4492	0/0:22,0:22:63.18:0,63,2201	0/0:37,0:37:99:0,99,3435	0/0:25,0:25:66.23:0,66,2628	0/0:24,0:24:60.21:0,60,2211	0/0:31,0:31:84.21:0,84,2751	0/0:40,0:40:99:0,111,3926	0/0:25,0:24:54.16:0,54,1699	0/0:14,0:14:39.12:0,39,1233	0/0:97,0:97:99:0,271,8763	0/0:15,0:15:36.12:0,36,1516	0/0:15,0:15:39.12:0,39,1454	0/0:53,0:53:99:0,134,5282	0/0:20,0:20:54.19:0,54,2060	0/0:43,0:43:99:0,123,4430	0/0:23,0:23:60.15:0,60,1805	1/1:0,13:13:9.03:242,9,0
chr10	95929001	.	G	GA	5993.59	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-8.308;DP=477;FS=7.899;HRun=7;HaplotypeScore=48.8349;InbreedingCoeff=0.9905;MQ=78.80;MQ0=0;MQRankSum=-1.998;QD=32.05;ReadPosRankSum=1.176;VQSLOD=4.6472;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:39.05:0,39,371	1/1:0,8:8:24.07:290,24,0	0/0:15,1:16:11.58:0,12,208	0/0:8,0:8:20.91:0,21,180	1/1:3,26:29:84.05:946,84,0	0/0:25,0:25:69.09:0,69,661	0/0:14,0:14:33.01:0,33,306	0/0:30,0:30:63.01:0,63,585	1/1:1,14:15:45.13:534,45,0	0/0:21,0:21:62.13:0,62,585	0/0:24,0:24:72.11:0,72,691	0/0:13,0:13:39.05:0,39,371	0/0:12,0:12:36.04:0,36,341	0/0:20,0:20:57.09:0,57,550	1/1:1,14:15:45.13:533,45,0	1/1:1,11:12:27.08:326,27,0	0/0:26,0:26:78.11:0,78,747	0/0:15,0:15:42.07:0,42,405	1/1:3,15:18:45.14:543,45,0	1/1:3,25:28:75.22:896,75,0	1/1:1,12:13:36.11:435,36,0	0/0:15,0:15:42.07:0,42,405	0/0:21,0:21:60.05:0,60,569	0/0:5,0:5:15.02:0,15,145	1/1:2,11:13:39.07:446,39,0	1/1:2,12:14:39.12:471,39,0	1/1:7,15:22:51.06:574,51,0	0/0:8,0:8:18.03:0,18,174
chr10	95929077	.	A	AT	8002.48	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=0.056;DP=434;FS=1.871;HRun=8;HaplotypeScore=52.3201;InbreedingCoeff=0.8916;MQ=69.16;MQ0=1;MQRankSum=0.397;QD=26.50;ReadPosRankSum=0.220;VQSLOD=5.4491;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:54.16:623,54,0	1/1:3,3:6:15.02:160,15,0	0/0:8,0:5:8.67:0,9,61	0/1:7,0:5:3.95:4,0,22	1/1:6,22:28:81.17:891,81,0	0/0:10,0:10:27.01:0,27,247	0/0:9,0:9:24.01:0,24,220	1/1:2,0:30:72.25:456,72,0	1/1:4,10:14:33.10:381,33,0	0/0:21,0:21:60.02:0,60,545	0/0:20,0:20:47.96:0,48,421	0/0:15,0:15:39.01:0,39,357	0/0:12,0:12:27.01:0,27,247	0/0:20,0:20:57.03:0,57,521	1/1:2,12:14:39.11:447,39,0	1/1:2,8:10:30.06:326,30,0	1/1:2,24:26:66.20:762,66,0	1/1:2,17:19:51.15:589,51,0	1/1:12,15:27:55.95:602,56,0	1/1:7,18:25:63.14:691,63,0	1/1:0,2:2:6.02:69,6,0	0/0:4,0:4:12.01:0,12,110	0/0:12,0:12:27.01:0,27,247	0/0:1,0:1:2.99:0,3,23	1/1:1,16:17:48.14:548,48,0	1/1:4,16:20:51.15:589,51,0	1/1:2,20:22:63.19:727,63,0	1/1:1,0:13:23.44:139,23,0
chr10	95929719	.	G	GGT	1628.17	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.052;DP=658;FS=0.000;HRun=0;HaplotypeScore=76.9276;InbreedingCoeff=0.9990;MQ=92.43;MQ0=0;MQRankSum=-1.611;QD=45.23;ReadPosRankSum=-2.622;VQSLOD=3.7728;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,144,2063	0/0:9,0:9:27.08:0,27,369	0/0:29,0:29:72.11:0,72,1004	0/0:26,0:26:72.18:0,72,1013	0/0:20,0:20:60.19:0,60,842	0/0:13,0:12:39.13:0,39,559	0/0:21,0:21:63.21:0,63,902	1/1:2,21:25:72.20:1200,72,0	0/0:29,0:29:78.26:0,78,1117	0/0:21,0:21:63.21:0,63,902	0/0:13,0:13:36.09:0,36,478	0/0:22,0:22:57.19:0,57,816	0/0:16,0:16:48.16:0,48,686	0/0:25,0:25:75.24:0,75,1056	0/0:33,0:33:96.30:0,96,1340	0/0:38,0:38:99:0,108,1528	0/0:28,0:28:81.16:0,81,1160	0/0:25,0:25:72.24:0,72,1029	0/0:28,0:28:78.25:0,78,1097	0/0:16,0:16:45.12:0,45,592	0/0:33,0:33:96.28:0,96,1319	0/0:14,0:14:42.13:0,42,580	0/0:19,0:19:54.16:0,54,734	0/0:31,0:31:93.30:0,93,1309	0/0:14,0:14:36.12:0,36,516	0/0:24,0:24:69.23:0,69,989	0/0:23,0:23:63.21:0,63,902	1/1:0,11:11:30.10:550,30,0
chr10	95930400	.	T	TCTCCCACGTG	76896.30	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.330;DP=802;FS=3.945;HRun=0;HaplotypeScore=234.3421;InbreedingCoeff=0.9894;MQ=69.04;MQ0=2;MQRankSum=-10.059;QD=101.85;ReadPosRankSum=6.605;VQSLOD=4.9034;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,13:28:36.12:1718,36,0	1/1:4,5:10:24.08:1192,24,0	0/0:24,0:23:57.18:0,57,1647	0/0:22,0:23:54.97:0,55,1679	1/1:9,14:25:33.11:1728,33,0	1/1:11,13:25:51.13:2398,51,0	1/1:16,8:26:57.20:2660,57,0	1/1:17,11:32:75.23:3168,75,0	1/1:14,22:38:92:4885,92,0	1/1:14,23:42:99:5716,126,0	1/1:6,12:21:30.10:1497,30,0	1/1:11,31:43:99:5526,111,0	1/1:9,26:38:93.32:4498,93,0	1/1:11,18:33:81.28:3987,81,0	1/1:16,28:48:99:5478,108,0	1/1:15,22:41:93.28:4605,93,0	1/1:7,6:15:33.11:1524,33,0	1/1:2,9:12:27.09:1292,27,0	1/1:14,4:21:57.14:1900,57,0	1/1:10,21:34:66.23:3402,66,0	1/1:13,9:27:36.12:1662,36,0	1/1:13,18:35:57.20:2890,57,0	1/1:6,9:20:33.11:1723,33,0	1/1:16,11:29:33.05:1533,33,0	1/1:11,20:32:60.21:2999,60,0	1/1:14,25:42:99:5096,111,0	1/1:10,18:30:63.22:3039,63,0	1/1:2,3:5:15.05:783,15,0
chr10	95930653	.	CA	C	1245.13	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.680;DP=757;FS=6.215;HRun=2;HaplotypeScore=96.6035;InbreedingCoeff=0.9692;MQ=86.59;MQ0=0;MQRankSum=-1.767;QD=32.77;ReadPosRankSum=-2.458;VQSLOD=2.3954;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,1994	0/0:12,0:12:36.12:0,36,539	0/0:36,0:35:98.39:0,98,1337	0/0:31,0:31:82.22:0,82,1155	0/0:26,0:26:75.12:0,75,1048	0/0:29,0:29:81.27:0,81,1213	0/0:24,0:24:72.24:0,72,1078	1/1:0,33:33:99:1243,99,0	0/0:21,0:21:63.15:0,63,879	0/0:34,0:34:99:0,99,1478	0/0:23,0:23:66.22:0,66,987	0/0:26,0:26:78.24:0,78,1130	0/0:29,0:29:87.28:0,87,1265	0/0:21,0:21:63.21:0,63,942	0/0:38,0:38:99:0,114,1671	0/0:27,0:27:78.26:0,78,1149	0/0:26,0:26:78.24:0,78,1129	0/0:21,0:21:60.08:0,60,824	0/0:29,0:29:87.28:0,87,1265	0/0:23,0:23:63.08:0,63,850	0/0:23,0:23:66.21:0,66,968	0/0:28,0:28:81.17:0,81,1142	0/0:26,0:26:78.11:0,78,1055	0/0:28,0:28:81.25:0,81,1175	0/0:30,0:30:90.22:0,90,1266	0/0:35,0:35:99:0,105,1554	0/0:28,0:28:81.25:0,81,1174	1/1:0,5:5:9.03:116,9,0
chr10	95932396	.	T	TC	709.64	PASS	AB=0.655;AC=5;AF=0.104;AN=48;BaseQRankSum=-3.359;DP=323;FS=3.326;HRun=1;HaplotypeScore=57.7857;InbreedingCoeff=0.6805;MQ=35.35;MQ0=56;MQRankSum=-0.763;QD=12.90;ReadPosRankSum=-0.608;VQSLOD=2.0832;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,12:13:17.99:229,18,0	0/0:4,0:4:9.03:0,9,115	./.	./.	0/0:9,0:8:9.01:0,9,99	0/0:16,0:13:32.86:0,33,334	0/0:9,0:6:12.04:0,12,153	./.	0/0:9,1:9:8.04:0,8,199	0/0:17,0:14:36.07:0,36,432	0/0:5,0:3:6.02:0,6,77	0/0:12,0:10:24.04:0,24,250	0/0:10,0:10:21.03:0,21,242	0/0:12,0:9:18.04:0,18,207	0/0:19,0:19:48.05:0,48,543	0/0:12,0:11:21.06:0,21,248	1/1:11,8:15:29.97:410,30,0	0/1:9,9:12:1.87:193,0,2	0/0:20,0:19:41.98:0,42,483	0/0:5,0:5:12.04:0,12,153	0/0:5,0:3:6.02:0,6,77	0/0:8,0:7:18.06:0,18,229	0/0:11,0:8:15.05:0,15,191	0/0:12,1:10:6.02:0,6,77	0/0:10,0:7:15.05:0,15,191	0/0:24,0:21:51.16:0,51,637	0/0:23,0:20:44.97:0,45,508	./.
chr10	95932648	.	AGAAGGAAG	A	930.31	PASS	AB=1.000;AC=23;AF=0.460;AN=50;BaseQRankSum=-1.938;DP=167;FS=0.000;HRun=0;HaplotypeScore=41.2517;InbreedingCoeff=0.4830;MQ=81.05;MQ0=6;MQRankSum=1.202;QD=13.89;ReadPosRankSum=-0.093;VQSLOD=1.0074;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:6.08:0,6,15	./.	0/0:18,0:10:12.02:0,12,146	0/0:20,0:14:15.04:0,15,255	0/0:4,0:4:0.89:0,1,2	1/1:7,0:7:12.01:146,12,0	1/1:6,0:6:9.03:150,9,0	1/1:5,0:7:5.94:41,6,0	0/0:4,0:4:3.33:0,3,8	1/1:2,5:7:12:221,12,0	1/1:3,0:3:3.01:50,3,0	1/1:7,0:6:9.03:131,9,0	1/1:5,0:5:3.01:50,3,0	1/1:3,0:3:2.60:10,3,0	0/0:5,0:5:8.50:0,8,60	./.	0/0:6,0:6:2.13:0,2,5	0/0:6,0:6:7.53:0,8,51	0/0:4,0:4:0.94:0,1,2	0/0:4,0:3:4.82:0,5,33	0/0:11,0:10:3.13:0,3,7	1/1:2,0:2:3:25,3,0	1/1:5,0:5:6.02:83,6,0	0/1:9,0:8:18.60:157,0,19	0/0:2,0:2:1.25:0,1,3	1/1:6,0:6:2.40:20,2,0	0/0:3,0:3:2.97:0,3,20	./.
chr10	95933304	.	AT	A	930.19	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.592;DP=629;FS=0.000;HRun=7;HaplotypeScore=69.9562;InbreedingCoeff=0.9600;MQ=68.55;MQ0=0;MQRankSum=1.290;QD=18.60;ReadPosRankSum=-3.559;VQSLOD=2.6701;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,110,826	0/0:13,0:13:36.08:0,36,422	0/0:9,1:9:9.37:0,9,221	0/0:16,0:14:14.75:0,15,180	0/0:37,0:37:99:0,108,1293	0/0:25,0:25:69.21:0,69,857	0/0:19,0:19:48.14:0,48,590	1/1:7,29:36:87.15:866,87,0	0/0:17,0:17:42.13:0,42,527	0/0:34,0:34:87.24:0,87,1052	0/0:27,0:27:66.20:0,66,818	0/0:21,0:21:63.18:0,63,772	0/0:14,0:14:39.11:0,39,479	0/0:11,0:11:33.07:0,33,387	0/0:21,0:21:60.18:0,60,742	0/0:26,0:25:78.22:0,78,955	0/0:36,0:36:99:0,104,751	0/0:36,0:36:99:0,101,737	0/0:21,0:21:42.10:0,42,511	0/0:26,0:26:72.22:0,72,894	0/0:16,0:16:39.11:0,39,477	0/0:14,0:14:42.12:0,42,516	0/0:19,0:19:51.16:0,51,630	0/0:15,0:15:39.12:0,39,490	0/0:15,0:15:42.13:0,42,518	0/0:20,0:20:57.14:0,57,688	0/0:32,0:32:87.27:0,87,1082	1/1:7,7:14:18.04:184,18,0
chr10	95933454	.	T	TTC	1510.64	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.519;DP=714;FS=3.153;HRun=0;HaplotypeScore=84.9239;InbreedingCoeff=0.9667;MQ=74.75;MQ0=0;MQRankSum=-0.254;QD=39.75;ReadPosRankSum=-3.791;VQSLOD=4.4514;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,123,1664	0/0:7,0:7:21.07:0,21,284	0/0:26,0:26:50.67:0,51,693	0/0:19,0:19:28.47:0,28,449	0/0:23,0:23:66.20:0,66,875	0/0:26,0:26:66.22:0,66,892	0/0:39,0:39:99:0,108,1460	1/1:5,28:34:87.28:1467,87,0	0/0:22,0:22:63.21:0,63,851	0/0:18,0:18:51.16:0,51,664	0/0:12,0:12:36.12:0,36,487	0/0:19,0:19:48.14:0,48,632	0/0:17,0:17:45.14:0,45,593	0/0:28,0:28:81.26:0,81,1079	0/0:29,0:29:78.26:0,78,1055	0/0:24,0:24:66.16:0,66,844	0/0:29,0:29:75.18:0,75,961	0/0:24,0:24:69.23:0,69,933	0/0:30,0:30:75.25:0,75,1011	0/0:24,0:24:63.21:0,63,852	0/0:59,0:59:99:0,156,2076	0/0:14,0:14:39.13:0,39,527	0/0:24,0:24:66.21:0,66,878	0/0:34,0:34:96.26:0,96,1261	0/0:21,0:20:63.13:0,63,812	0/0:31,0:31:84.27:0,84,1124	0/0:29,0:29:81.25:0,81,1078	1/1:0,3:4:9.03:158,9,0
chr10	95934149	.	TAATGGAGA	T	1763.42	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.250;DP=663;FS=0.736;HRun=0;HaplotypeScore=160.9948;InbreedingCoeff=0.9904;MQ=79.98;MQ0=0;MQRankSum=-5.752;QD=56.88;ReadPosRankSum=-2.425;VQSLOD=2.7614;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,4925	0/0:8,0:8:24.08:0,24,1050	0/0:17,0:17:51.18:0,51,1997	0/0:16,0:16:28.98:0,29,1685	0/0:25,0:25:72.25:0,72,3036	0/0:22,0:22:66.23:0,66,2990	0/0:28,0:28:84.26:0,84,3469	1/1:4,20:24:60.05:1444,60,0	0/0:15,0:15:45.15:0,45,1936	0/0:27,0:26:78.26:0,78,3363	0/0:18,0:18:51.17:0,51,1950	0/0:24,0:24:72.23:0,72,2898	0/0:21,0:21:63.22:0,63,2733	0/0:27,0:27:81.28:0,81,3493	0/0:28,0:28:84.28:0,84,3639	0/0:34,0:34:99:0,99,4172	0/0:29,0:29:84.29:0,84,3774	0/0:27,0:27:78.25:0,78,3368	0/0:23,0:23:66.23:0,66,2853	0/0:28,0:28:84.29:0,84,3661	0/0:38,0:38:99:0,111,4322	0/0:22,0:22:66.22:0,66,2827	0/0:21,0:21:63.22:0,63,2555	0/0:30,0:30:90.31:0,90,3968	0/0:22,0:22:66.23:0,66,2983	0/0:26,0:26:78.27:0,78,3308	0/0:18,0:18:54.17:0,54,2279	1/1:1,6:7:15.05:438,15,0
chr10	95934437	.	TAAAA	T	4449.18	PASS	AB=0.618;AC=24;AF=0.429;AN=56;BaseQRankSum=7.359;DP=644;FS=2.885;HRun=17;HaplotypeScore=130.7214;InbreedingCoeff=0.8322;MQ=63.14;MQ0=4;MQRankSum=-3.853;QD=16.98;ReadPosRankSum=5.348;VQSLOD=2.1939;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:49:99:0,111,1466	1/1:2,7:9:12.78:180,13,0	0/0:38,0:21:28.82:0,29,367	0/0:28,0:17:19.22:0,19,264	1/1:7,11:20:18.61:215,19,0	0/0:22,0:24:63.18:0,63,1112	0/0:11,0:14:33.02:0,33,529	0/1:9,0:29:15.72:16,0,37	1/1:5,12:18:9.03:341,9,0	0/0:17,0:19:47.96:0,48,758	0/0:17,0:17:42.11:0,42,704	0/0:20,0:21:36.07:0,36,519	0/0:23,0:25:51.15:0,51,864	0/0:19,0:23:54.10:0,54,938	1/1:4,19:23:45.07:537,45,0	1/1:8,14:26:41.24:464,41,0	0/0:30,0:31:88.89:0,89,1222	0/0:28,0:32:76.61:0,77,1024	1/1:7,12:20:32.66:418,33,0	1/1:2,15:19:32.31:386,32,0	1/1:4,15:19:23.81:304,24,0	0/0:17,0:19:33.01:0,33,500	0/0:15,0:16:35.01:0,35,472	0/0:18,0:21:48.63:0,49,931	1/1:4,15:19:37.12:457,37,0	0/1:9,10:20:18.98:331,0,19	1/1:10,23:34:60.44:752,60,0	1/1:1,1:5:7.99:50,8,0
chr10	95936242	.	TG	T	11741.51	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.087;DP=775;FS=1.524;HRun=1;HaplotypeScore=78.4470;InbreedingCoeff=0.9998;MQ=83.11;MQ0=0;MQRankSum=-1.795;QD=39.01;ReadPosRankSum=1.648;VQSLOD=5.5494;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,123,1935	1/1:0,12:12:36.12:504,36,0	0/0:23,0:23:69.21:0,69,1030	0/0:22,0:22:66.19:0,66,1002	1/1:0,27:27:72.24:1007,72,0	0/0:23,0:23:69.24:0,69,1103	0/0:29,0:29:87.30:0,87,1386	0/0:36,0:36:99:0,102,1627	1/1:0,20:20:60.20:838,60,0	0/0:19,0:19:54.08:0,54,831	0/0:16,0:16:48.15:0,48,743	0/0:37,0:37:99:0,111,1752	0/0:35,0:35:99:0,105,1654	0/0:30,0:30:90.31:0,90,1435	1/1:0,28:28:81.27:1133,81,0	1/1:0,32:32:96.32:1343,96,0	0/0:36,0:36:99:0,108,1723	0/0:36,0:35:99:0,108,1723	1/1:0,15:15:45.15:630,45,0	1/1:0,24:24:63.21:881,63,0	1/1:0,60:60:99:2182,157,0	0/0:24,0:24:72.23:0,72,1128	0/0:18,0:18:51.17:0,51,812	0/0:36,0:36:99:0,105,1655	1/1:0,19:19:51.17:713,51,0	1/1:2,32:34:51.34:1294,51,0	1/1:0,30:30:87.29:1217,87,0	0/0:9,0:9:27.09:0,27,432
chr10	95937387	.	CTTGT	C	1506.24	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.571;DP=771;FS=10.013;HRun=0;HaplotypeScore=124.2330;InbreedingCoeff=0.9979;MQ=85.06;MQ0=0;MQRankSum=-5.904;QD=39.64;ReadPosRankSum=-4.786;VQSLOD=1.9093;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,150,3843	0/0:13,0:13:39.13:0,39,1053	0/0:26,0:26:69.24:0,69,1795	0/0:24,0:24:69.24:0,69,1745	0/0:21,0:21:63.22:0,63,1617	0/0:28,0:28:78.27:0,78,2096	0/0:21,0:21:57.20:0,57,1532	1/1:7,24:31:72.21:1229,72,0	0/0:33,0:33:99:0,99,2625	0/0:32,0:32:90.31:0,90,2385	0/0:15,0:15:45.14:0,45,1142	0/0:39,0:39:99:0,117,3021	0/0:26,0:26:78.22:0,78,2009	0/0:27,0:27:75.24:0,75,1960	0/0:49,0:49:99:0,144,3741	0/0:29,0:28:87.30:0,87,2274	0/0:24,0:24:72.25:0,72,1864	0/0:24,0:24:69.20:0,69,1766	0/0:27,0:27:78.26:0,78,1949	0/0:20,0:20:51.17:0,51,1252	0/0:41,0:41:99:0,114,2937	0/0:27,0:27:75.20:0,75,1862	0/0:19,0:19:51.17:0,51,1241	0/0:25,0:25:75.26:0,75,1971	0/0:29,0:29:81.28:0,81,2146	0/0:27,0:27:75.24:0,75,1814	0/0:30,0:29:90.27:0,90,2243	1/1:0,7:7:21.07:398,21,0
chr10	95940951	.	AAAAAATGTC	A	1868.52	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.870;DP=628;FS=0.781;HRun=0;HaplotypeScore=169.5787;InbreedingCoeff=0.9025;MQ=80.26;MQ0=0;MQRankSum=-6.007;QD=71.87;ReadPosRankSum=-2.141;VQSLOD=2.9793;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,5153	0/0:11,0:11:33.11:0,33,1567	0/0:20,0:20:50.62:0,51,1819	0/0:16,0:16:38.33:0,38,1304	0/0:32,0:32:90.26:0,90,3957	0/0:18,0:18:54.16:0,54,2335	0/0:30,0:30:90.29:0,90,4127	1/1:2,23:25:66.19:1886,66,0	0/0:22,0:22:63.22:0,63,3104	0/0:25,0:25:69.24:0,69,3396	0/0:17,0:17:48.16:0,48,2347	0/0:28,0:28:84.27:0,84,3758	0/0:25,0:25:72.25:0,72,3482	0/0:24,0:24:72.25:0,72,3497	0/0:33,0:33:99:0,99,4702	0/0:24,0:24:72.25:0,72,3395	0/0:30,0:30:90.31:0,90,4271	0/0:17,0:17:51.18:0,51,2386	0/0:19,0:19:57.20:0,57,2751	0/0:15,0:15:45.15:0,45,2147	0/0:25,0:25:72.25:0,72,3421	0/0:19,0:19:54.19:0,54,2545	0/0:20,0:20:60.21:0,60,2797	0/0:28,0:28:81.28:0,81,3865	0/0:28,0:28:78.27:0,78,3599	0/0:28,0:28:84.29:0,84,4100	0/0:13,0:13:39.13:0,39,1925	1/1:0,1:1:3.01:92,3,0
chr10	95941820	.	AT	A	7426.59	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=14.046;DP=487;FS=4.563;HRun=8;HaplotypeScore=71.9132;InbreedingCoeff=0.9605;MQ=64.44;MQ0=0;MQRankSum=-2.206;QD=24.59;ReadPosRankSum=1.329;VQSLOD=5.7807;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:99:975,102,0	1/1:1,6:7:12.02:116,12,0	0/0:10,0:8:9:0,9,86	0/0:14,0:12:18.94:0,19,211	1/1:4,19:23:53.60:440,54,0	0/0:22,0:22:63.19:0,63,761	0/0:13,0:13:36.11:0,36,435	1/1:7,34:41:99:977,102,0	1/1:2,18:20:51.08:492,51,0	0/0:19,0:19:57.17:0,57,688	0/0:17,0:17:42.12:0,42,497	0/0:18,0:18:54.15:0,54,638	0/0:16,0:16:45.14:0,45,543	0/0:14,0:14:42.11:0,42,494	1/1:1,20:21:57.09:550,57,0	1/1:0,11:11:30.05:290,30,0	1/1:0,22:22:62.95:608,63,0	1/1:3,18:21:54.09:521,54,0	1/1:0,10:10:30.05:290,30,0	1/1:1,18:19:45.07:434,45,0	1/1:2,11:13:33.05:319,33,0	0/0:8,0:8:21.05:0,21,242	0/0:14,0:14:42.13:0,42,504	0/0:20,0:20:54.12:0,54,636	1/1:1,22:23:60.03:568,60,0	1/1:2,12:14:2.80:304,3,0	1/1:0,12:12:33.05:319,33,0	1/1:1,8:9:24:223,24,0
chr10	95942154	.	C	CG	1130.55	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.822;DP=426;FS=17.982;HRun=1;HaplotypeScore=41.6191;InbreedingCoeff=0.9852;MQ=83.04;MQ0=1;MQRankSum=0.494;QD=36.47;ReadPosRankSum=-2.528;VQSLOD=1.2890;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.22:0,69,895	0/0:6,0:6:15.05:0,15,192	0/0:12,0:12:36.10:0,36,442	0/0:16,0:16:33.95:0,34,452	0/0:18,0:18:48.16:0,48,621	0/0:19,0:19:54.16:0,54,687	0/0:17,0:17:51.08:0,51,624	1/1:0,21:21:60.20:892,60,0	0/0:6,0:6:18.03:0,18,204	0/0:18,0:18:54.18:0,54,701	0/0:12,0:12:36.12:0,36,467	0/0:9,0:9:27.07:0,27,336	0/0:10,0:10:30.10:0,30,390	0/0:14,0:13:36.10:0,36,453	0/0:19,0:19:57.15:0,57,721	0/0:14,0:14:42.14:0,42,545	0/0:17,0:17:45.15:0,45,584	0/0:20,0:20:54.18:0,54,699	0/0:13,0:13:39.13:0,39,506	0/0:20,0:20:54.13:0,54,681	0/0:12,0:12:36.12:0,36,465	0/0:12,0:12:30.10:0,30,389	0/0:18,0:18:51.14:0,51,645	0/0:16,0:16:48.11:0,48,604	0/0:19,0:19:54.16:0,54,686	0/0:21,0:21:60.19:0,60,779	0/0:14,0:13:39.13:0,39,505	1/1:2,8:10:24.08:359,24,0
chr10	95942764	.	CA	C	18654.47	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.883;DP=787;FS=16.144;HRun=7;HaplotypeScore=86.5672;InbreedingCoeff=0.9892;MQ=75.09;MQ0=0;MQRankSum=-7.009;QD=25.04;ReadPosRankSum=6.547;VQSLOD=3.3809;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,53:56:99:1469,144,0	1/1:0,9:9:18.04:184,18,0	0/0:27,0:26:58.68:0,59,630	0/0:15,0:15:16.46:0,16,338	1/1:3,28:31:78.05:759,78,0	1/1:1,12:13:27.06:275,27,0	1/1:3,27:30:51.11:520,51,0	1/1:5,30:35:87.15:865,87,0	1/1:2,26:28:69.16:704,69,0	1/1:1,36:37:99:1060,105,0	1/1:1,22:23:63.10:631,63,0	1/1:3,24:27:63.14:643,63,0	1/1:0,27:27:66.15:673,66,0	1/1:0,28:28:78.18:796,78,0	1/1:1,34:35:87.19:885,87,0	1/1:1,22:23:51.12:520,51,0	1/1:4,26:30:72.16:735,72,0	1/1:3,28:31:69.16:704,69,0	1/1:0,25:25:75.17:765,75,0	1/1:2,25:27:69.15:701,69,0	1/1:0,41:41:99:1009,99,0	1/1:0,20:20:51.11:518,51,0	1/1:0,16:16:35.69:367,36,0	1/1:5,40:45:99:1101,108,0	1/1:3,22:25:66.15:673,66,0	1/1:2,36:38:99:1100,108,0	1/1:3,24:27:63.10:632,63,0	1/1:0,18:18:36.08:367,36,0
chr10	95943563	.	AG	A	1031.09	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.105;DP=504;FS=0.000;HRun=6;HaplotypeScore=52.9003;InbreedingCoeff=0.9866;MQ=72.23;MQ0=1;MQRankSum=-0.812;QD=23.98;ReadPosRankSum=-1.073;VQSLOD=2.6379;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.20:0,63,829	0/0:9,0:9:27.08:0,27,344	0/0:23,0:21:51.16:0,51,648	0/0:21,0:18:42.13:0,42,536	0/0:15,0:15:39.11:0,39,495	0/0:23,0:23:69.22:0,69,893	0/0:20,0:20:57.19:0,57,749	1/1:2,21:23:63.14:669,63,0	0/0:6,0:6:15.05:0,15,197	0/0:24,0:24:69.16:0,69,871	0/0:19,0:19:48.16:0,48,632	0/0:16,0:16:48.16:0,48,631	0/0:12,0:12:33.10:0,33,420	0/0:12,0:12:36.10:0,36,459	0/0:6,0:6:18.06:0,18,236	0/0:13,0:13:36.12:0,36,473	0/0:25,0:25:72.23:0,72,945	0/0:16,0:16:42.13:0,42,539	0/0:14,0:14:36.12:0,36,468	0/0:17,0:17:51.14:0,51,641	0/0:37,0:37:99:0,102,1326	0/0:20,0:20:54.18:0,54,709	0/0:25,0:25:69.22:0,69,901	0/0:29,0:29:81.25:0,81,1053	0/0:13,0:13:36.12:0,36,474	0/0:10,0:10:30.05:0,30,375	0/0:15,0:15:45.15:0,45,592	1/1:1,19:20:45.11:484,45,0
chr10	95944566	.	C	CAG	18966.77	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-12.924;DP=758;FS=4.886;HRun=0;HaplotypeScore=84.9974;InbreedingCoeff=0.9994;MQ=78.86;MQ0=0;MQRankSum=-1.301;QD=51.26;ReadPosRankSum=3.393;VQSLOD=5.6402;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,40:42:99:2144,111,0	1/1:0,11:11:33.11:637,33,0	0/0:19,0:19:45.60:0,46,646	0/0:21,0:21:47.64:0,48,648	1/1:2,20:22:54.19:1041,54,0	0/0:28,0:28:84.27:0,84,1264	0/0:53,0:53:99:0,150,2250	0/0:35,0:35:96.32:0,96,1450	1/1:0,25:25:69.24:1333,69,0	0/0:28,0:28:84.27:0,84,1266	0/0:13,0:13:36.12:0,36,551	0/0:33,0:33:96.30:0,96,1441	0/0:37,0:37:99:0,105,1560	0/0:29,0:29:87.22:0,87,1260	1/1:1,46:48:99:2414,127,0	1/1:2,29:31:75.26:1449,75,0	1/1:2,31:33:90.31:1738,90,0	1/1:0,18:18:48.16:927,48,0	1/1:1,17:19:55.06:1013,55,0	1/1:2,18:20:48.16:915,48,0	1/1:0,33:32:93.32:1796,93,0	0/0:20,0:20:60.19:0,60,897	0/0:27,0:27:75.25:0,75,1127	0/0:37,0:37:99:0,111,1697	1/1:0,19:19:54.19:1043,54,0	1/1:1,30:32:50.36:1706,50,0	1/1:0,17:17:42.14:811,42,0	0/0:8,0:8:21.07:0,21,317
chr10	95946194	.	G	GGA	4650.34	PASS	AB=0.779;AC=22;AF=0.423;AN=52;BaseQRankSum=0.881;DP=438;FS=49.430;HRun=0;HaplotypeScore=139.0509;InbreedingCoeff=0.7804;MQ=38.88;MQ0=18;MQRankSum=-6.158;QD=21.63;ReadPosRankSum=1.320;VQSLOD=3.1263;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:31:17.62:18,0,116	0/0:9,0:9:3.90:0,4,270	./.	./.	0/0:21,0:21:44.88:0,45,613	1/1:6,16:22:50.60:901,51,0	1/1:3,10:11:24.08:457,24,0	0/0:11,0:10:24.01:0,24,357	0/0:15,0:15:17.86:0,18,236	1/1:11,14:22:42.12:749,42,0	1/1:7,12:18:21.07:418,21,0	1/1:4,10:15:9.03:155,9,0	1/1:6,9:15:15.01:233,15,0	1/1:5,8:12:20.90:373,21,0	0/0:28,0:28:60:0,60,874	0/0:18,0:18:38.73:0,39,556	0/1:10,0:12:10.72:11,0,36	0/0:5,0:9:7.19:0,7,51	0/0:12,0:12:21.02:0,21,338	0/0:23,0:21:47.96:0,48,697	0/0:11,0:11:18.03:0,18,212	1/1:6,6:12:26.70:383,27,0	1/1:12,9:21:39.10:661,39,0	1/1:3,10:10:17.99:292,18,0	0/0:17,0:17:30.04:0,30,454	0/0:14,0:13:30.05:0,30,443	0/0:23,0:20:16.80:0,17,539	0/0:9,0:8:5.98:0,6,97
chr10	95948515	.	G	GA	1071.54	PASS	AB=0.983;AC=16;AF=0.286;AN=56;BaseQRankSum=1.291;DP=428;FS=5.131;HRun=10;HaplotypeScore=62.1234;InbreedingCoeff=0.5015;MQ=53.96;MQ0=25;MQRankSum=-8.020;QD=7.00;ReadPosRankSum=-0.141;VQSLOD=1.3998;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,17:21:45.11:478,45,0	0/0:3,0:3:5.99:0,6,49	0/1:25,1:6:11.21:11,0,32	0/0:17,0:5:5.98:0,6,49	0/0:21,0:21:35.94:0,36,296	0/0:15,0:14:6.56:0,7,42	1/1:6,0:5:4:10,4,0	0/0:25,0:21:56.88:0,57,460	0/0:11,0:11:14.98:0,15,123	0/0:14,0:13:3.59:0,4,34	0/0:8,0:6:2.87:0,3,12	1/1:15,0:12:7.46:42,7,0	1/1:12,0:11:1.33:13,1,0	0/1:15,0:13:5.78:6,0,21	0/0:16,1:16:4.04:0,4,239	0/0:14,0:14:33.83:0,34,272	1/1:2,12:14:33.08:350,33,0	1/1:2,11:13:30.08:320,30,0	0/0:19,0:18:4.43:0,4,236	0/0:14,0:15:29.76:0,30,236	0/0:5,0:4:5.99:0,6,49	0/1:18,0:18:5.22:5,0,11	0/1:8,0:8:1:2,0,1	0/0:10,0:8:6.09:0,6,31	0/0:22,0:21:47.30:0,47,373	0/0:12,0:13:36.29:0,36,274	0/0:24,1:25:30.89:0,31,454	0/0:17,0:15:22.18:0,22,174
chr10	95948524	.	AAT	A	2043	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=10.512;DP=420;FS=0.488;HRun=0;HaplotypeScore=63.4343;InbreedingCoeff=0.7107;MQ=53.72;MQ0=21;MQRankSum=-2.358;QD=10.81;ReadPosRankSum=-1.784;VQSLOD=2.9708;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:33.81:0,34,141	0/0:2,1:3:6.02:0,6,99	0/0:28,0:6:11.52:0,12,137	0/0:19,0:5:11.39:0,11,125	0/1:21,0:18:8.44:8,0,551	1/1:13,1:13:27.97:359,28,0	1/1:5,2:6:9.03:118,9,0	0/0:24,0:22:63.11:0,63,959	0/0:11,0:10:14.08:0,14,247	1/1:11,6:16:40.54:438,41,0	1/1:9,1:8:10.19:99,10,0	1/1:10,6:13:23.73:264,24,0	1/1:5,5:9:12.04:158,12,0	1/1:12,2:13:27.49:320,27,0	0/0:16,0:15:13.06:0,13,498	0/0:15,0:14:35.03:0,35,561	0/0:13,0:13:26.53:0,27,114	0/0:13,0:12:7.81:0,8,70	0/0:17,0:17:47.13:0,47,647	0/0:14,0:14:18.24:0,18,463	0/0:3,0:2:6.02:0,6,99	1/1:17,0:17:24.45:265,24,0	1/1:4,1:5:9.03:114,9,0	1/1:9,1:8:9.82:77,10,0	0/1:22,0:21:5.76:6,0,648	0/0:16,0:16:41.32:0,41,629	0/1:26,0:26:24.40:24,0,841	0/0:17,0:15:21.90:0,22,333
chr10	95948527	.	A	AG	2584.79	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=10.138;DP=433;FS=0.954;HRun=0;HaplotypeScore=63.0635;InbreedingCoeff=0.7303;MQ=52.89;MQ0=20;MQRankSum=-1.882;QD=14.77;ReadPosRankSum=-3.100;VQSLOD=3.8577;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:44.86:0,45,413	0/0:5,0:4:6.02:0,6,84	0/0:28,0:6:10.85:0,11,130	0/0:19,0:5:12.03:0,12,149	0/0:22,0:19:1.48:0,1,482	1/1:3,11:13:30.10:404,30,0	1/1:4,1:4:9.03:118,9,0	0/0:26,0:22:61.09:0,61,830	0/0:9,0:12:14.81:0,15,209	1/1:15,3:17:44.89:478,45,0	1/1:6,5:9:14.99:172,15,0	1/1:13,6:13:30.07:380,30,0	1/1:9,2:10:12.02:158,12,0	1/1:7,9:15:35.67:397,36,0	0/0:11,0:15:25.97:0,26,412	0/0:13,0:14:38.80:0,39,511	0/0:12,0:12:36.01:0,36,355	0/0:12,0:11:28.60:0,29,275	0/0:18,0:18:51.17:0,51,694	0/0:14,0:14:24.10:0,24,436	0/0:3,0:3:6.02:0,6,84	1/1:2,14:16:27.08:341,27,0	1/1:4,3:6:11.87:128,12,0	1/1:8,1:7:10.53:79,11,0	0/0:21,0:20:3.55:0,4,560	0/1:24,0:24:99:112,0,546	0/1:25,0:25:24.17:24,0,670	0/0:13,0:12:18.78:0,19,293
chr10	95948579	.	AAG	A	509.16	PASS	AB=0.660;AC=4;AF=0.071;AN=56;BaseQRankSum=6.363;DP=476;FS=7.805;HRun=0;HaplotypeScore=80.6467;InbreedingCoeff=0.4445;MQ=47.01;MQ0=33;MQRankSum=-4.259;QD=17.56;ReadPosRankSum=0.037;VQSLOD=2.8846;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:9,5:12:4.80:251,0,5	0/0:7,0:6:12.04:0,12,167	0/0:4,0:1:3.01:0,3,37	0/0:2,0:1:3.01:0,3,37	0/0:26,0:24:61.06:0,61,806	0/0:15,0:14:36.12:0,36,523	0/0:15,0:11:30.10:0,30,380	0/0:29,0:8:24.08:0,24,296	0/0:18,0:17:39.13:0,39,587	0/0:26,0:23:69.22:0,69,969	0/0:20,0:17:39.60:0,40,528	0/0:22,0:16:39.13:0,39,575	0/0:18,0:17:36.12:0,36,488	0/0:17,0:16:42.14:0,42,593	0/0:21,0:20:48.15:0,48,610	0/0:23,0:22:60.19:0,60,824	0/1:2,5:7:18.97:165,0,19	1/1:4,4:7:17.99:206,18,0	0/0:19,0:12:33.10:0,33,429	0/0:19,0:19:51.16:0,51,669	0/0:4,0:4:12.04:0,12,150	0/0:11,0:11:27.09:0,27,384	0/0:24,0:23:66.21:0,66,868	0/0:13,0:13:39.12:0,39,510	0/0:13,0:13:39.13:0,39,555	0/0:30,0:29:87.29:0,87,1378	0/0:28,0:28:78.49:0,78,1034	0/0:23,0:22:57.18:0,57,743
chr10	95948605	.	G	GA	6065.40	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-8.235;DP=572;FS=14.451;HRun=3;HaplotypeScore=71.0640;InbreedingCoeff=0.9855;MQ=58.52;MQ0=8;MQRankSum=0.995;QD=29.16;ReadPosRankSum=2.183;VQSLOD=3.2734;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:42.13:0,42,500	0/0:10,0:9:21.05:0,21,239	0/0:12,0:9:24.07:0,24,286	0/0:10,0:9:11.85:0,12,125	0/0:25,0:24:61.93:0,62,693	1/1:3,19:22:57.19:774,57,0	1/1:3,13:14:33.07:425,33,0	0/0:39,0:36:93.28:0,93,1103	0/0:20,0:19:30.08:0,30,358	1/1:7,21:25:60.18:788,60,0	1/1:7,16:20:46.39:606,46,0	1/1:7,16:18:38.49:496,38,0	1/1:0,17:16:39.13:530,39,0	1/1:4,14:18:33.11:447,33,0	0/0:23,0:22:48.15:0,48,573	0/0:20,0:19:54.17:0,54,645	0/0:23,0:23:63.13:0,63,716	0/0:17,0:17:48.15:0,48,573	0/0:24,0:21:60.18:0,60,716	0/0:22,0:22:58.99:0,59,686	0/0:4,0:4:9.03:0,9,108	1/1:6,9:15:33.09:416,33,0	1/1:3,25:27:66:892,66,0	1/1:1,17:18:51.17:692,51,0	0/0:15,0:15:42.01:0,42,454	0/0:31,1:32:32.35:0,32,810	0/0:26,0:26:63.18:0,63,674	0/0:24,0:24:48.83:0,49,670
chr10	95948921	.	GCGCGCACGCGCACACACACACACACA	G	10816.01	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=6.756;DP=543;FS=5.600;HRun=0;HaplotypeScore=335.0705;InbreedingCoeff=0.9311;MQ=61.90;MQ0=3;MQRankSum=-8.225;QD=62.52;ReadPosRankSum=4.395;VQSLOD=3.0835;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.10:0,75,3165	0/0:8,0:8:15.03:0,15,557	0/0:13,0:12:30.07:0,30,853	0/0:14,0:11:21.62:0,22,494	0/0:24,0:24:57.18:0,57,2201	1/1:0,10:10:6.02:426,6,0	1/1:0,15:15:2.88:90,3,0	0/0:23,0:23:60.15:0,60,2092	0/0:21,0:21:54.09:0,54,1877	1/1:0,20:20:51.17:2406,51,0	1/1:1,10:11:9.03:499,9,0	1/1:1,0:21:32.91:1342,33,0	1/1:0,19:19:27.09:1810,27,0	1/1:0,11:12:15.05:1044,15,0	0/0:28,0:27:66.21:0,66,2075	0/0:16,0:16:30.09:0,30,1039	0/0:23,0:23:59.14:0,59,3044	0/0:24,0:24:60.15:0,60,4243	0/0:14,0:14:36.12:0,36,1122	0/0:26,0:25:63.17:0,63,2468	0/0:24,0:24:26.01:0,26,1451	1/1:0,19:20:33.11:1651,33,0	1/1:0,26:26:14.89:919,15,0	1/1:1,18:19:9.03:629,9,0	0/0:19,0:19:45.14:0,45,1656	0/0:26,0:26:75.22:0,75,2786	0/0:23,0:23:63.18:0,63,1785	0/0:16,0:16:33.11:0,33,1647
chr10	95948931	.	GCACACACACACA	G	10077.11	PASS	AB=1.000;AC=38;AF=0.731;AN=52;BaseQRankSum=6.416;DP=549;FS=1.403;HRun=0;HaplotypeScore=207.3288;InbreedingCoeff=0.5602;MQ=52.47;MQ0=12;MQRankSum=-5.369;QD=24.76;ReadPosRankSum=1.751;VQSLOD=4.0155;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:30:15:0,15,387	1/1:4,4:8:5.59:207,6,0	./.	./.	1/1:11,14:25:24.05:795,24,0	1/1:11,0:11:6.02:167,6,0	0/1:15,0:15:0:0,0,0	0/0:20,0:20:24.90:0,25,566	1/1:9,13:22:15.05:518,15,0	1/1:22,0:21:15.77:702,16,0	0/1:13,0:11:18.17:158,0,18	1/1:21,0:21:25.19:603,25,0	1/1:19,0:19:24.08:666,24,0	1/1:12,0:12:15.05:418,15,0	1/1:13,15:28:27.09:826,27,0	1/1:3,12:15:2.21:603,2,0	0/0:18,0:27:21.07:0,21,843	0/0:19,0:27:30.08:0,30,1385	1/1:8,4:13:9.46:312,9,0	1/1:14,9:23:6.05:542,6,0	0/1:22,0:21:88.42:88,0,153	0/1:20,0:20:8.38:402,0,8	1/1:26,0:26:11.99:280,12,0	1/1:20,0:19:9.03:242,9,0	1/1:7,12:20:12.04:325,12,0	1/1:14,12:28:31.45:1176,31,0	1/1:8,11:20:33.11:1045,33,0	0/0:9,0:17:12.04:0,12,274
chr10	95949658	.	CGTGGGTG	C	11511.72	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=16.597;DP=732;FS=17.576;HRun=0;HaplotypeScore=180.1455;InbreedingCoeff=0.9978;MQ=81.32;MQ0=0;MQRankSum=-16.921;QD=52.81;ReadPosRankSum=1.671;VQSLOD=3.8260;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,160,6477	0/0:9,0:9:24.07:0,24,886	0/0:19,0:19:51.17:0,51,1789	0/0:29,0:29:81.28:0,81,3015	0/0:27,0:27:81.28:0,81,3210	1/1:0,25:25:63.21:1649,63,0	1/1:4,16:20:30.10:807,30,0	0/0:29,0:29:75.26:0,75,2924	0/0:35,0:35:99:0,99,3857	1/1:1,25:26:75.23:1833,75,0	1/1:2,19:21:27.09:727,27,0	1/1:3,20:23:57.20:1532,57,0	1/1:5,27:32:69.24:1857,69,0	1/1:2,17:19:42.14:1089,42,0	0/0:32,0:32:90.31:0,90,3685	0/0:19,0:19:57.18:0,57,2099	0/0:38,0:38:99:0,111,4416	0/0:35,0:35:99:0,102,3993	0/0:15,0:15:45.15:0,45,1798	0/0:17,0:17:51.17:0,51,2006	0/0:52,0:52:99:0,147,5672	1/1:0,14:14:24.08:646,24,0	1/1:1,13:14:18.06:485,18,0	1/1:2,22:24:33.11:888,33,0	0/0:26,0:26:78.27:0,78,3145	0/0:29,0:29:81.28:0,81,3300	0/0:39,0:39:99:0,117,4713	0/0:10,0:10:30.10:0,30,1229
chr10	95950746	.	CA	C	1253.98	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.365;DP=852;FS=0.649;HRun=1;HaplotypeScore=80.7189;InbreedingCoeff=0.9979;MQ=85.45;MQ0=0;MQRankSum=-0.394;QD=33.00;ReadPosRankSum=-3.387;VQSLOD=2.5020;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,162,2505	0/0:16,0:16:48.13:0,48,720	0/0:24,0:24:72.21:0,72,1066	0/0:30,0:30:87.23:0,87,1299	0/0:25,0:25:72.23:0,72,1111	0/0:25,0:25:75.24:0,75,1172	0/0:37,0:37:99:0,111,1764	1/1:0,30:30:81.13:1082,81,0	0/0:30,0:30:90.29:0,90,1411	0/0:23,0:23:69.23:0,69,1083	0/0:19,0:19:57.18:0,57,883	0/0:37,0:37:99:0,111,1700	0/0:43,0:43:99:0,129,2035	0/0:32,0:32:96.26:0,96,1400	0/0:29,0:29:87.30:0,87,1389	0/0:32,0:32:96.27:0,96,1440	0/0:51,0:51:99:0,153,2391	0/0:34,0:34:99:0,102,1575	0/0:22,0:22:66.22:0,66,1034	0/0:19,0:19:57.16:0,57,863	0/0:56,0:56:99:0,165,2490	0/0:31,0:31:93.32:0,93,1484	0/0:19,0:19:57.19:0,57,910	0/0:40,0:40:99:0,117,1819	0/0:20,0:20:60.17:0,60,891	0/0:31,0:31:93.29:0,93,1425	0/0:35,0:35:99:0,105,1630	1/1:0,8:8:21.07:293,21,0
chr10	95951817	.	TTTTATTTATTTATTTATTTATTTATTTATTTA	T	9905.64	PASS	AB=0.821;AC=33;AF=0.635;AN=52;BaseQRankSum=8.512;DP=412;FS=9.372;HRun=0;HaplotypeScore=318.2136;InbreedingCoeff=-0.1098;MQ=61.48;MQ0=0;MQRankSum=-4.036;QD=28.55;ReadPosRankSum=3.367;VQSLOD=2.0053;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:18:93.15:93,0,635	0/1:6,0:8:98.39:271,0,98	./.	./.	0/1:15,0:21:99:259,0,270	1/1:9,9:18:14.35:1211,14,0	0/1:12,0:12:0.01:0,0,0	0/0:37,0:37:63.14:0,63,756	0/0:7,0:7:9.02:0,9,110	1/1:11,8:19:23.53:952,24,0	1/1:8,4:12:12.04:930,12,0	1/1:16,7:23:9.03:722,9,0	1/1:11,4:15:9.03:734,9,0	1/1:13,3:16:6.02:475,6,0	0/1:11,0:13:99:128,0,121	0/1:16,0:19:99:131,0,109	1/1:10,3:13:6.02:488,6,0	0/1:15,0:21:99:111,0,196	0/1:19,0:21:99:268,0,131	0/1:9,0:11:28.79:277,0,29	0/0:12,0:12:12.01:0,12,125	1/1:6,0:6:9.02:159,9,0	1/1:7,2:9:6.02:489,6,0	1/1:10,5:15:8.84:715,9,0	0/1:12,0:17:92.27:552,0,92	0/1:10,0:14:99:259,0,243	0/1:11,0:16:98.58:412,0,99	0/1:6,0:9:99:268,0,135
chr10	95951843	.	TTA	T	1027.30	PASS	AC=42;AF=0.840;AN=50;BaseQRankSum=6.255;DP=166;FS=0.944;HRun=0;HaplotypeScore=87.9554;InbreedingCoeff=0.4078;MQ=45.05;MQ0=1;MQRankSum=-1.811;QD=8.03;ReadPosRankSum=3.453;VQSLOD=3.3872;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:16.11:0,16,400	1/1:5,0:5:5.75:30,6,0	./.	./.	1/1:9,0:9:17.67:112,18,0	1/1:9,0:9:13.65:64,14,0	./.	1/1:9,8:17:21.05:284,21,0	1/1:2,0:2:3.01:44,3,0	1/1:8,0:8:1.59:32,2,0	1/1:4,0:4:10.51:43,11,0	1/1:7,0:7:8.05:36,8,0	1/1:4,0:4:8.52:42,9,0	1/1:3,0:3:5.21:22,5,0	1/1:6,0:6:2.88:15,3,0	1/1:5,0:5:2.88:15,3,0	1/1:3,0:3:5.68:27,6,0	0/0:14,0:14:1.05:0,1,211	1/1:6,0:6:5.75:30,6,0	1/1:3,0:3:5.75:30,6,0	0/0:3,0:3:1.55:0,2,4	0/0:2,0:2:3.11:0,3,9	1/1:2,0:2:5.68:28,6,0	1/1:5,0:5:8.05:36,8,0	1/1:8,0:8:11.74:81,12,0	1/1:9,0:9:11.75:98,12,0	1/1:9,0:8:8.63:45,9,0	1/1:4,0:4:5.75:30,6,0
chr10	95952068	.	GA	G	5484.21	PASS	AB=0.708;AC=51;AF=0.911;AN=56;BaseQRankSum=-0.177;DP=566;FS=43.179;HRun=13;HaplotypeScore=82.5189;InbreedingCoeff=0.1987;MQ=73.68;MQ0=3;MQRankSum=-0.083;QD=10.16;ReadPosRankSum=4.195;VQSLOD=1.0708;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,29:37:83.48:613,83,0	1/1:2,3:6:10.97:72,11,0	0/0:25,0:19:0.64:0,1,97	0/1:12,1:14:9.83:10,0,42	0/1:7,6:14:7:114,0,7	1/1:4,0:24:36.61:105,37,0	1/1:4,0:20:24.42:71,24,0	0/1:13,20:33:43.89:336,0,44	1/1:6,13:19:29.78:219,30,0	1/1:2,1:24:42.90:137,43,0	1/1:3,0:20:26.45:77,26,0	1/1:5,0:21:32.58:94,33,0	1/1:4,0:14:18.31:53,18,0	1/1:5,0:20:28.50:82,28,0	1/1:5,15:21:20.54:305,21,0	1/1:1,16:17:41.74:306,42,0	1/1:8,31:42:88.65:614,89,0	1/1:2,25:29:75.65:537,76,0	1/1:8,15:23:46.73:333,47,0	1/1:5,13:19:11.59:237,12,0	1/1:2,9:11:26.82:195,27,0	1/1:0,0:8:16.30:47,16,0	1/1:3,0:11:19.26:68,19,0	1/1:4,0:31:48.87:141,49,0	1/1:4,6:10:14.90:109,15,0	1/1:7,12:22:38.87:258,39,0	1/1:4,16:22:27.44:241,27,0	1/1:0,5:5:14.91:109,15,0
chr10	95952586	.	G	GA	5221.53	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-12.087;DP=606;FS=5.309;HRun=9;HaplotypeScore=60.8518;InbreedingCoeff=0.9637;MQ=76.22;MQ0=1;MQRankSum=-2.142;QD=24.51;ReadPosRankSum=2.324;VQSLOD=5.8409;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:49.33:0,49,576	0/0:16,0:16:38.99:0,39,338	0/0:13,0:11:19.52:0,20,161	0/0:24,0:21:37.89:0,38,258	0/0:27,0:27:68.97:0,69,599	1/1:3,11:14:4.02:273,4,0	1/1:5,23:28:51.14:564,51,0	0/0:23,0:23:62.97:0,63,543	0/0:28,0:28:68.96:0,69,599	1/1:6,22:29:43.42:678,43,0	1/1:1,11:12:7.03:306,7,0	1/1:0,17:17:42.11:465,42,0	1/1:0,26:26:66.18:730,66,0	1/1:4,24:28:60.16:664,60,0	0/0:26,0:26:65.98:0,66,573	0/0:22,0:22:50.97:0,51,443	0/0:31,0:32:88.96:0,89,752	0/0:21,0:21:47.84:0,48,405	0/0:13,0:13:32.99:0,33,286	0/0:25,0:25:47.49:0,47,571	0/0:21,0:21:53.99:0,54,469	1/1:3,19:22:30.59:547,31,0	1/1:3,17:20:51.14:564,51,0	1/1:2,15:17:39.11:431,39,0	0/0:19,0:19:50.95:0,51,438	0/0:21,0:21:50.98:0,51,443	0/0:22,1:23:32.80:0,33,514	0/0:14,0:14:41.99:0,42,364
chr10	95953009	.	G	GA	3566.41	PASS	AB=0.933;AC=23;AF=0.411;AN=56;BaseQRankSum=-6.353;DP=702;FS=7.507;HRun=12;HaplotypeScore=94.0964;InbreedingCoeff=0.7578;MQ=72.93;MQ0=1;MQRankSum=0.509;QD=10.77;ReadPosRankSum=-1.857;VQSLOD=2.5201;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:41:82.46:0,82,597	0/0:10,0:10:23.86:0,24,175	0/0:33,0:19:22.62:0,23,155	0/0:38,0:29:29.75:0,30,196	0/0:20,0:22:41.39:0,41,279	1/1:8,14:26:29.97:273,30,0	1/1:8,12:21:13.96:232,14,0	0/0:23,1:24:11.82:0,12,253	0/0:16,0:16:32.74:0,33,241	1/1:20,13:34:61.87:543,62,0	1/1:6,22:28:50.48:497,50,0	1/1:7,23:31:22.49:410,22,0	1/1:10,17:28:10.03:388,10,0	1/1:6,10:16:18.03:175,18,0	0/1:24,2:29:6.63:7,0,266	0/0:23,0:23:50.64:0,51,370	0/0:22,0:22:41.59:0,42,306	0/0:24,2:28:1.10:0,1,338	0/1:24,1:26:0.94:1,0,247	0/0:19,0:20:46.76:0,47,334	0/0:21,0:22:46.71:0,47,334	1/1:12,13:25:5.50:367,6,0	1/1:6,13:20:26.88:248,27,0	1/1:7,12:20:26:396,26,0	0/0:18,0:18:35.71:0,36,262	0/1:22,3:27:29.79:30,0,282	0/0:26,0:25:59.56:0,60,438	0/0:26,0:26:44.45:0,44,318
chr10	95953828	.	TTA	T	7388.88	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.507;DP=612;FS=13.069;HRun=0;HaplotypeScore=71.2557;InbreedingCoeff=0.9986;MQ=80.54;MQ0=0;MQRankSum=-4.042;QD=40.38;ReadPosRankSum=2.237;VQSLOD=5.6446;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,2147	0/0:6,0:6:18.06:0,18,334	0/0:22,0:22:63.20:0,63,1155	0/0:15,0:15:39.11:0,39,689	0/0:26,0:26:75.23:0,75,1381	1/1:0,23:23:60.20:918,60,0	1/1:0,26:26:75.25:1148,75,0	0/0:39,0:39:99:0,111,2041	0/0:15,0:15:45.15:0,45,869	1/1:1,21:22:63.21:964,63,0	1/1:0,11:11:33.03:467,33,0	1/1:0,18:18:45.15:680,45,0	1/1:1,19:20:48.16:734,48,0	1/1:1,13:14:30.10:459,30,0	0/0:17,0:17:51.16:0,51,949	0/0:17,0:17:51.16:0,51,951	0/0:34,0:34:99:0,99,1911	0/0:28,0:27:81.28:0,81,1525	0/0:22,0:22:63.21:0,63,1173	0/0:31,0:31:90.31:0,90,1738	0/0:24,0:24:72.20:0,72,1319	1/1:0,12:12:33.11:505,33,0	1/1:0,15:15:42.14:643,42,0	1/1:0,22:22:57.19:873,57,0	0/0:17,0:17:51.17:0,51,984	0/0:27,1:28:38.28:0,38,1449	0/0:30,0:30:81.23:0,81,1492	0/0:20,0:20:60.21:0,60,1158
chr10	95956594	.	T	TGATG	7295.29	PASS	AC=32;AF=0.615;AN=52;BaseQRankSum=-3.586;DP=762;FS=2.154;HRun=0;HaplotypeScore=120.2098;InbreedingCoeff=0.9159;MQ=58.84;MQ0=8;MQRankSum=-3.887;QD=15.59;ReadPosRankSum=-0.729;VQSLOD=4.6342;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,15:38:22.32:495,22,0	1/1:10,8:20:18.06:422,18,0	./.	./.	1/1:8,12:22:15.05:352,15,0	0/0:21,0:22:35.80:0,36,529	0/0:31,0:30:27.09:0,27,392	1/1:40,0:39:9.03:127,9,0	1/1:4,16:21:33.11:775,33,0	0/0:27,0:27:36.12:0,36,556	0/0:14,0:14:17.86:0,18,278	0/0:34,0:34:48.13:0,48,689	0/0:33,0:33:57.19:0,57,881	0/0:31,0:31:60.20:0,60,902	1/1:12,22:34:57.20:1338,57,0	1/1:19,14:32:27.09:634,27,0	1/1:10,11:21:9.03:211,9,0	1/1:10,17:27:27.09:634,27,0	1/1:16,0:17:9.92:132,10,0	1/1:11,0:21:21.96:333,22,0	1/1:23,1:42:0.20:0,0,0	0/0:24,0:24:29.38:0,29,454	0/0:21,0:21:30.10:0,30,455	0/0:22,0:22:30.10:0,30,462	1/1:19,12:33:21.54:494,22,0	1/1:14,0:32:3.22:457,3,0	1/1:18,1:41:24.08:435,24,0	1/1:10,0:23:27.09:456,27,0
chr10	95960989	.	CTT	C	4239.72	PASS	AB=0.929;AC=27;AF=0.482;AN=56;BaseQRankSum=8.739;DP=534;FS=10.549;HRun=14;HaplotypeScore=82.4356;InbreedingCoeff=0.9191;MQ=75.23;MQ0=12;MQRankSum=0.549;QD=15.94;ReadPosRankSum=6.446;VQSLOD=2.9616;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,22:29:62.94:580,63,0	0/0:7,0:8:14.47:0,14,136	0/0:36,0:18:23.15:0,23,219	0/1:23,0:16:3:3,0,136	0/0:17,0:18:42.99:0,43,469	1/1:4,18:22:44.96:414,45,0	1/1:4,12:16:36.01:333,36,0	0/0:24,0:24:39.11:0,39,523	0/0:16,0:16:39.08:0,39,488	1/1:4,12:15:35.98:332,36,0	1/1:1,11:13:29.18:261,29,0	1/1:7,14:21:38.71:345,39,0	1/1:2,15:17:30.02:278,30,0	1/1:2,9:12:3.76:170,4,0	0/0:15,0:16:33.05:0,33,426	0/0:23,0:23:59.27:0,59,759	1/1:6,15:21:34.65:343,35,0	1/1:0,24:25:56.93:574,57,0	0/0:20,0:21:43.37:0,43,557	0/0:18,0:20:41.97:0,42,505	0/0:14,0:14:16.27:0,16,193	1/1:1,9:10:15.45:140,15,0	1/1:1,13:14:23.88:222,24,0	1/1:7,10:20:25.83:246,26,0	0/0:18,0:20:46.92:0,47,642	0/0:27,0:27:65.68:0,66,844	0/0:20,0:21:37.55:0,38,588	0/0:3,0:4:11.49:0,11,114
chr10	95961687	.	CCT	C	1949.79	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.579;DP=835;FS=6.754;HRun=0;HaplotypeScore=95.4948;InbreedingCoeff=0.9998;MQ=81.75;MQ0=0;MQRankSum=-4.546;QD=39.79;ReadPosRankSum=1.751;VQSLOD=5.4329;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,49:49:99:2045,126,0	0/0:15,0:15:45.15:0,45,912	0/0:19,0:20:57.14:0,57,1056	0/0:24,0:24:56.75:0,57,998	0/0:23,0:23:69.21:0,69,1336	0/0:32,0:32:96.33:0,96,1948	0/0:39,0:39:99:0,114,2230	0/0:29,0:29:87.28:0,87,1670	0/0:36,0:36:99:0,108,2087	0/0:24,0:24:72.24:0,72,1430	0/0:20,0:20:60.20:0,60,1181	0/0:28,0:28:84.24:0,84,1561	0/0:28,0:28:84.27:0,84,1667	0/0:32,0:32:96.32:0,96,1912	0/0:47,0:47:99:0,141,2793	0/0:47,0:47:99:0,141,2683	0/0:33,0:33:99:0,99,1912	0/0:29,0:29:87.13:0,87,1485	0/0:20,0:20:57.15:0,57,988	0/0:22,0:22:66.22:0,66,1305	0/0:71,0:71:99:0,214,4235	0/0:24,0:24:72.24:0,72,1408	0/0:25,0:25:75.24:0,75,1478	0/0:37,0:37:99:0,111,2216	0/0:16,0:16:48.16:0,48,928	0/0:28,0:28:84.26:0,84,1590	0/0:25,0:25:75.26:0,75,1521	0/0:12,0:12:36.12:0,36,716
chr10	95961962	.	T	TGAC	1059.23	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.811;DP=685;FS=15.249;HRun=0;HaplotypeScore=95.2422;InbreedingCoeff=0.9989;MQ=85.03;MQ0=0;MQRankSum=-2.450;QD=35.31;ReadPosRankSum=1.100;VQSLOD=3.1522;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:30:51.17:1154,51,0	0/0:10,0:10:30.10:0,30,499	0/0:22,0:22:50.93:0,51,810	0/0:26,0:26:68.54:0,69,1009	0/0:24,0:24:69.24:0,69,1149	0/0:16,0:16:45.15:0,45,750	0/0:27,0:27:81.26:0,81,1322	0/0:44,0:44:99:0,117,1873	0/0:24,0:24:69.24:0,69,1150	0/0:28,0:28:84.29:0,84,1399	0/0:20,0:20:60.21:0,60,1000	0/0:23,0:23:66.23:0,66,1093	0/0:30,0:30:87.27:0,87,1394	0/0:26,0:26:72.25:0,72,1188	0/0:27,0:27:75.24:0,75,1219	0/0:27,0:27:78.27:0,78,1299	0/0:37,0:37:99:0,108,1799	0/0:26,0:26:75.26:0,75,1249	0/0:21,0:21:48.08:0,48,868	0/0:15,0:15:45.15:0,45,750	0/0:20,0:20:57.18:0,57,923	0/0:27,0:27:72.25:0,72,1194	0/0:23,0:23:69.24:0,69,1149	0/0:30,0:30:87.30:0,87,1443	0/0:23,0:23:66.21:0,66,1063	0/0:24,0:24:63.20:0,63,1003	0/0:25,0:25:69.20:0,69,1084	0/0:10,0:10:30.10:0,30,500
chr10	95966819	.	T	TA	11595.97	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-2.538;DP=693;FS=2.049;HRun=10;HaplotypeScore=91.7552;InbreedingCoeff=0.6446;MQ=68.35;MQ0=0;MQRankSum=-1.898;QD=17.28;ReadPosRankSum=3.317;VQSLOD=5.3356;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,29:35:53.58:775,54,0	1/1:0,8:8:24.06:255,24,0	0/0:19,0:18:12.27:0,12,103	0/1:16,0:14:11.32:11,0,124	1/1:7,35:44:86.42:1090,86,0	1/1:4,1:28:56.69:282,57,0	1/1:2,1:19:42.95:233,43,0	1/1:8,18:26:54.11:560,54,0	1/1:5,25:30:69.17:734,69,0	1/1:3,2:36:92.01:491,92,0	1/1:3,1:21:50.17:274,50,0	1/1:4,0:19:37:191,37,0	1/1:5,1:23:45.70:253,46,0	1/1:0,1:24:54.38:291,54,0	1/1:6,24:30:42.23:648,42,0	1/1:2,15:17:45.11:480,45,0	1/1:5,1:57:99:602,117,0	1/1:4,1:35:71.46:376,71,0	1/1:1,17:19:53.95:549,54,0	1/1:4,31:34:84.13:866,84,0	1/1:3,5:8:15.04:160,15,0	1/1:1,0:13:34.51:187,35,0	1/1:2,0:21:45.52:228,46,0	1/1:1,0:14:34.16:171,34,0	1/1:4,20:24:45.11:480,45,0	1/1:8,12:20:32.63:345,33,0	1/1:5,32:37:53.44:775,53,0	1/1:2,10:12:27.07:288,27,0
chr10	95968425	.	TTGTGTGTG	T	2899.63	PASS	AB=0.924;AC=35;AF=0.673;AN=52;BaseQRankSum=4.199;DP=626;FS=20.390;HRun=0;HaplotypeScore=171.3543;InbreedingCoeff=0.2350;MQ=65.55;MQ0=17;MQRankSum=-4.424;QD=6.70;ReadPosRankSum=-1.541;VQSLOD=1.3315;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:41:26.97:0,27,764	1/1:3,0:3:6.02:149,6,0	./.	./.	1/1:11,5:16:12:242,12,0	0/1:14,0:18:27.81:29,0,28	0/1:19,0:20:23.76:24,0,36	0/0:25,0:24:12.51:0,13,285	1/1:15,4:18:12.04:297,12,0	0/1:19,0:19:17.12:17,0,24	0/1:9,0:11:17.48:62,0,17	1/1:20,1:22:5.93:91,6,0	1/1:16,1:21:11.89:133,12,0	1/1:15,0:20:11.85:83,12,0	1/1:22,8:33:27.56:630,28,0	1/1:17,9:25:6.49:149,6,0	0/0:22,0:29:25.34:0,25,322	1/1:13,0:16:5.92:40,6,0	0/0:24,0:24:4.68:0,5,24	1/1:8,3:11:12:232,12,0	0/1:41,0:41:12.85:139,0,13	1/1:10,0:13:2.90:16,3,0	1/1:8,1:10:5.99:95,6,0	0/1:31,0:31:30.15:102,0,30	1/1:16,5:21:6.02:149,6,0	0/1:29,0:29:12.52:115,0,13	1/1:15,10:26:12.04:279,12,0	0/0:11,0:14:12.02:0,12,305
chr10	95968643	.	T	TG	2774.80	PASS	AB=0.616;AC=19;AF=0.339;AN=56;BaseQRankSum=-5.781;DP=517;FS=7.078;HRun=9;HaplotypeScore=66.5638;InbreedingCoeff=0.4295;MQ=78.70;MQ0=0;MQRankSum=-2.118;QD=12.91;ReadPosRankSum=-2.192;VQSLOD=2.6812;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:42:99:0,105,865	1/1:1,7:8:11.87:126,12,0	0/0:17,0:17:41.59:0,42,328	0/0:13,0:13:11.62:0,12,146	0/1:5,11:16:24.87:205,0,25	0/0:17,0:17:37.93:0,38,309	0/0:29,0:29:59.95:0,60,517	1/1:14,11:25:0.98:225,1,0	1/1:3,10:13:4.02:273,4,0	0/0:24,0:24:56.35:0,56,476	0/0:7,0:7:14.92:0,15,121	0/0:19,0:19:50.97:0,51,438	0/0:14,0:14:29.98:0,30,260	0/0:16,0:16:38.99:0,39,338	1/1:12,8:20:6.76:285,7,0	0/1:6,11:17:5.04:157,0,5	0/0:31,0:31:80.97:0,81,702	0/0:20,0:20:59.99:0,60,521	1/1:4,12:16:30.05:314,30,0	0/1:6,10:16:2:200,0,2	0/1:13,13:26:10:356,0,10	0/0:17,0:17:23.98:0,24,208	0/0:17,0:17:29.97:0,30,259	0/0:18,0:19:53.02:0,53,449	0/1:5,12:17:8.01:148,0,8	0/1:3,4:7:34.01:115,0,34	0/1:9,16:25:13.01:323,0,13	1/1:2,7:9:21.06:230,21,0
chr10	95969662	.	A	AT	10721.73	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-16.087;DP=833;FS=2.248;HRun=6;HaplotypeScore=78.3292;InbreedingCoeff=0.9999;MQ=82.79;MQ0=0;MQRankSum=-0.228;QD=31.17;ReadPosRankSum=2.627;VQSLOD=5.5024;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,159,1596	0/0:14,0:14:33.06:0,33,330	0/0:24,0:25:43.74:0,44,423	0/0:23,0:23:43.04:0,43,476	0/0:33,0:33:87.16:0,87,873	1/1:1,27:28:66.21:826,66,0	1/1:2,29:31:72.23:906,72,0	0/0:43,0:43:99:0,111,1132	0/0:22,0:22:63.14:0,63,642	1/1:2,38:40:99:1383,111,0	1/1:0,23:23:60.15:724,60,0	1/1:3,19:22:48.15:604,48,0	1/1:1,22:23:63.20:793,63,0	1/1:3,34:37:93.30:1169,93,0	0/0:36,0:36:99:0,108,1095	0/0:24,0:24:66.15:0,66,673	1/1:1,29:30:75.24:943,75,0	1/1:0,20:20:57.18:716,57,0	0/0:27,0:27:69.13:0,69,697	0/0:30,0:30:90.18:0,90,906	0/0:42,0:42:99:0,117,1193	1/1:3,32:35:75.19:922,75,0	1/1:2,27:29:72.23:906,72,0	1/1:0,26:26:66.21:830,66,0	0/0:34,0:34:96.21:0,96,979	0/0:34,0:34:58.48:0,58,888	0/0:37,0:36:99:0,105,1064	0/0:10,0:10:30.07:0,30,306
chr10	95976360	.	TTCCCTCCCTCCCTCCCTCCTTCCCTCTA	T	6666.08	PASS	AB=0.577;AC=25;AF=0.481;AN=52;BaseQRankSum=6.106;DP=309;FS=22.807;HRun=0;HaplotypeScore=166.3401;InbreedingCoeff=0.6288;MQ=59.81;MQ0=8;MQRankSum=-4.321;QD=36.63;ReadPosRankSum=2.628;VQSLOD=2.4802;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:15.05:635,15,0	./.	0/0:25,0:8:1.43:0,1,70	0/0:14,0:5:3.01:0,3,104	0/0:5,0:5:6.02:0,6,310	1/1:4,17:21:18.06:1237,18,0	1/1:17,0:16:15.05:761,15,0	0/0:14,0:14:18.59:0,19,775	0/0:4,0:4:2.99:0,3,24	1/1:3,10:13:20.72:426,21,0	1/1:5,10:15:8.99:285,9,0	0/1:4,11:15:4.60:827,0,5	1/1:5,10:15:9.03:509,9,0	1/1:5,8:13:9.03:625,9,0	0/0:10,0:10:18.06:0,18,648	0/0:6,0:6:15.05:0,15,838	1/1:7,7:14:3.01:218,3,0	1/1:5,0:5:3.01:111,3,0	0/0:7,0:6:9.03:0,9,187	./.	0/0:14,0:14:21.54:0,22,1452	1/1:4,9:13:9.03:602,9,0	1/1:1,8:9:3.01:212,3,0	1/1:5,13:18:2.72:218,3,0	0/0:5,0:5:6.02:0,6,274	0/0:5,0:5:3.01:0,3,161	0/0:13,0:13:21.07:0,21,1816	0/0:4,0:3:6.02:0,6,256
chr10	95976378	.	C	CT	571.72	PASS	AB=0.909;AC=14;AF=0.259;AN=54;BaseQRankSum=4.812;DP=253;FS=0.000;HRun=1;HaplotypeScore=71.0513;InbreedingCoeff=0.1273;MQ=56.01;MQ0=8;MQRankSum=-3.003;QD=4.20;ReadPosRankSum=4.358;VQSLOD=0.3448;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,4:12:28.63:181,0,29	./.	0/1:27,0:7:29.56:30,0,40	0/0:20,0:5:1.47:0,1,152	0/0:6,0:6:12.04:0,12,168	0/1:17,0:17:7.57:44,0,8	0/1:5,6:10:41.67:127,0,42	0/0:10,0:10:19.78:0,20,256	0/0:1,0:1:2.99:0,3,24	1/1:10,0:10:9.02:123,9,0	1/1:10,0:10:4.26:50,4,0	0/1:14,0:14:3.51:27,0,4	0/1:11,0:11:11.01:11,0,17	1/1:8,0:8:4.74:23,5,0	0/0:7,0:7:17.59:0,18,249	0/0:7,0:7:18.06:0,18,252	0/0:7,0:7:0:0,0,0	0/1:6,1:7:30.70:85,0,31	0/0:6,0:6:18.06:0,18,250	0/0:2,0:2:6.02:0,6,82	0/0:12,0:12:24.05:0,24,336	0/1:9,0:9:5.31:18,0,5	0/0:8,0:8:1.02:0,1,3	0/0:13,0:13:2.04:0,2,6	0/0:4,0:4:9.03:0,9,124	0/0:2,0:2:6.02:0,6,81	0/0:9,0:9:27.09:0,27,378	0/0:3,0:2:6.02:0,6,84
chr10	95976381	.	TCCC	T	289.87	PASS	AB=0.930;AC=22;AF=0.407;AN=54;BaseQRankSum=7.804;DP=260;FS=1.712;HRun=3;HaplotypeScore=70.6084;InbreedingCoeff=0.3760;MQ=53.81;MQ0=8;MQRankSum=-4.810;QD=1.72;ReadPosRankSum=5.160;VQSLOD=-0.6265;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,3:14:55.50:56,0,87	./.	0/1:24,0:6:0.34:0,0,92	0/0:20,0:5:14.98:0,15,305	0/0:6,0:6:12.04:0,12,296	1/1:17,0:17:15.34:105,15,0	0/1:13,2:14:21.91:22,0,162	0/0:8,0:8:18.06:0,18,444	0/0:1,0:1:3.01:0,3,62	0/1:10,0:10:3.71:4,0,33	1/1:10,0:10:5.72:33,6,0	1/1:14,0:14:6.54:59,7,0	1/1:11,0:11:0.61:27,1,0	0/1:9,0:9:29.41:31,0,29	0/0:8,0:8:21.06:0,21,432	0/0:7,0:7:21.07:0,21,485	1/1:7,0:7:2.98:21,3,0	0/1:6,1:7:0.06:0,0,88	0/0:6,0:6:18.06:0,18,390	0/0:3,0:3:9.03:0,9,198	0/0:12,0:12:24.08:0,24,583	1/1:9,0:9:8.89:60,9,0	1/1:8,0:8:2.88:15,3,0	1/1:13,0:13:2.90:21,3,0	0/0:4,0:4:9.03:0,9,212	0/0:2,0:2:6.02:0,6,148	0/0:10,0:10:30.10:0,30,733	0/0:3,0:2:6.02:0,6,115
chr10	95976386	.	CTA	C	203.71	PASS	AB=0.946;AC=19;AF=0.352;AN=54;BaseQRankSum=7.619;DP=262;FS=3.853;HRun=0;HaplotypeScore=69.3860;InbreedingCoeff=0.3678;MQ=54.09;MQ0=7;MQRankSum=-5.526;QD=1.46;ReadPosRankSum=4.593;VQSLOD=1.1580;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,3:17:56:66,0,56	./.	0/0:25,0:6:1.20:0,1,128	0/0:22,0:5:12.93:0,13,233	0/0:6,0:6:15.02:0,15,221	1/1:17,0:17:16.70:84,17,0	0/1:13,2:14:32.56:33,0,103	0/0:8,0:8:15.04:0,15,258	0/0:3,0:3:9.01:0,9,130	0/1:10,0:10:5.29:5,0,22	1/1:10,0:10:2.83:14,3,0	1/1:14,0:14:9.72:48,10,0	0/1:11,0:11:1.31:14,0,1	0/1:9,0:9:18.69:19,0,19	0/0:7,0:7:15.05:0,15,281	0/0:7,0:7:18.03:0,18,273	1/1:7,0:7:2.84:14,3,0	0/0:7,1:8:1.40:0,1,94	0/0:4,0:4:9.03:0,9,172	0/0:3,0:3:9.03:0,9,173	0/0:10,0:10:21.06:0,21,370	1/1:9,0:9:8.62:46,9,0	1/1:8,0:8:2.37:8,2,0	1/1:13,0:13:2.77:14,3,0	0/0:2,0:2:6.02:0,6,116	0/0:4,0:4:12.03:0,12,200	0/0:11,0:11:30.10:0,30,564	0/0:1,0:1:3.01:0,3,58
chr10	95979786	.	T	TTTAA	6839.08	PASS	AB=0.958;AC=27;AF=0.500;AN=54;BaseQRankSum=-11.536;DP=425;FS=2.888;HRun=0;HaplotypeScore=61.2354;InbreedingCoeff=0.8257;MQ=63.03;MQ0=0;MQRankSum=1.386;QD=31.37;ReadPosRankSum=1.972;VQSLOD=4.2040;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,18:26:39.13:948,39,0	0/0:7,0:7:12.04:0,12,196	0/0:3,0:3:0:0,0,0	./.	0/0:25,0:25:63.20:0,63,989	1/1:0,19:19:45.15:1094,45,0	1/1:3,4:7:9.03:219,9,0	0/0:28,0:28:45.14:0,45,695	0/0:10,0:10:24.07:0,24,363	1/1:7,10:17:30.10:707,30,0	1/1:7,12:19:30.10:674,30,0	1/1:1,3:4:6.02:146,6,0	1/1:9,4:14:9.03:218,9,0	1/1:4,6:10:15.05:365,15,0	0/0:12,0:12:21.07:0,21,343	0/0:18,0:18:30.09:0,30,463	1/1:10,13:23:30.10:729,30,0	1/1:13,13:27:6.99:911,7,0	0/0:22,0:22:36.10:0,36,536	0/0:19,0:19:48.15:0,48,753	0/0:5,0:5:9.03:0,9,147	1/1:3,3:7:9.03:219,9,0	1/1:8,5:13:12.51:293,13,0	1/1:5,4:9:12.93:293,13,0	0/0:25,0:25:57.18:0,57,895	0/1:22,0:23:24.47:24,0,681	0/0:17,0:17:39.13:0,39,631	0/0:15,0:15:24.08:0,24,384
chr10	95983710	.	A	AG	8950.28	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-7.752;DP=713;FS=18.353;HRun=6;HaplotypeScore=77.4347;InbreedingCoeff=0.9988;MQ=68.81;MQ0=0;MQRankSum=0.018;QD=26.32;ReadPosRankSum=-0.438;VQSLOD=3.1001;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:46,0:46:99:734,118,0	1/1:1,8:9:21.05:250,21,0	0/0:23,0:20:28.41:0,28,321	0/0:20,0:16:25.54:0,26,263	1/1:3,20:23:54.06:635,54,0	0/0:23,0:23:57.11:0,57,575	0/0:27,0:27:66.14:0,66,673	1/1:2,20:22:54.13:656,54,0	1/1:1,17:18:42.13:528,42,0	0/0:31,0:31:84.18:0,84,853	0/0:15,0:15:36.08:0,36,367	0/0:35,0:35:96.19:0,96,968	0/0:26,0:26:69.12:0,69,689	0/0:29,0:29:84.17:0,84,848	1/1:1,27:28:60.19:755,60,0	1/1:4,17:21:45.14:566,45,0	0/0:37,0:37:99:0,99,1010	0/0:34,0:34:87.19:0,87,887	1/1:1,15:16:42.06:480,42,0	1/1:1,16:17:42.13:525,42,0	1/1:5,54:60:99:1524,123,0	0/0:22,0:22:47.19:0,47,487	0/0:9,0:9:26.98:0,27,261	0/0:42,0:42:99:0,117,1188	1/1:2,26:28:69.22:865,69,0	1/1:2,16:18:48.15:602,48,0	1/1:5,18:22:39.12:491,39,0	1/1:1,10:11:27.09:340,27,0
chr10	95983711	.	G	GA	3796.66	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=17.694;DP=714;FS=17.430;HRun=1;HaplotypeScore=94.5236;InbreedingCoeff=0.6555;MQ=68.75;MQ0=0;MQRankSum=-1.842;QD=11.00;ReadPosRankSum=3.733;VQSLOD=0.5278;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,46:46:99:1704,120,0	0/1:10,0:10:7.20:53,0,7	0/0:23,0:20:44.34:0,44,530	0/0:20,0:16:41.70:0,42,458	1/1:23,0:23:9.38:171,9,0	0/0:23,0:23:69.09:0,69,884	0/0:25,0:25:75.21:0,75,996	0/1:22,0:22:2.66:145,0,3	1/1:18,0:18:15.01:131,15,0	0/0:30,0:30:87.28:0,87,1197	0/0:15,0:15:42.10:0,42,550	0/0:36,0:36:99:0,105,1407	0/0:25,0:25:75.22:0,75,1008	0/0:29,0:29:87.28:0,87,1192	1/1:28,0:28:32.44:205,32,0	0/1:21,0:21:52.28:122,0,52	0/0:36,0:36:99:0,108,1457	0/0:35,0:35:96.25:0,96,1277	0/1:17,0:17:6.12:118,0,6	1/1:18,0:18:26.03:164,26,0	1/1:60,0:60:5.57:363,6,0	0/0:22,0:22:63.14:0,63,796	0/0:9,0:9:27.08:0,27,362	0/0:41,0:41:99:0,123,1681	1/1:28,0:28:15.80:239,16,0	1/1:19,0:19:19.42:154,19,0	0/1:23,0:22:44.15:121,0,44	1/1:12,0:12:24.81:108,25,0
chr10	95983996	.	C	CT	1394.34	PASS	AB=0.788;AC=24;AF=0.429;AN=56;BaseQRankSum=-3.570;DP=610;FS=2.160;HRun=16;HaplotypeScore=88.6511;InbreedingCoeff=-0.0706;MQ=72.90;MQ0=7;MQRankSum=-0.908;QD=3.87;ReadPosRankSum=1.478;VQSLOD=1.1312;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,1:31:11.53:0,12,67	0/0:4,0:6:7.83:0,8,39	0/0:63,0:18:3.24:0,3,44	0/0:58,0:23:3.03:0,3,47	0/0:15,0:19:29.30:0,29,150	0/1:8,7:16:46.81:70,0,47	1/1:2,7:9:1.20:103,1,0	0/1:28,4:36:46.42:171,0,46	0/0:11,0:14:20.59:0,21,99	0/1:13,9:22:20.49:128,0,20	1/1:4,1:8:4.76:72,5,0	0/1:10,5:15:43.20:62,0,43	0/1:6,9:15:7.78:39,0,8	0/1:7,8:16:17.87:68,0,18	0/0:17,0:18:30.22:0,30,161	0/0:12,0:13:25.19:0,25,137	0/1:19,15:36:99:117,0,113	0/1:9,8:19:63.17:63,0,63	0/0:23,0:26:19.92:0,20,170	0/1:20,1:24:10.57:11,0,83	0/1:6,3:11:5.28:5,0,58	1/1:12,13:24:24.35:181,24,0	1/1:8,9:18:24.09:168,24,0	0/1:6,7:13:29.33:75,0,29	0/1:16,0:17:22.83:23,0,55	0/1:13,0:14:13.19:13,0,28	0/1:23,1:30:0.72:1,0,152	1/1:4,9:16:16.64:194,17,0
chr10	95984869	.	A	ACAT	20101.39	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-14.180;DP=623;FS=0.301;HRun=0;HaplotypeScore=85.1233;InbreedingCoeff=0.9951;MQ=74.13;MQ0=0;MQRankSum=-8.493;QD=62.23;ReadPosRankSum=2.128;VQSLOD=6.6263;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,35:39:99:2436,99,0	1/1:0,4:4:12.04:295,12,0	0/0:16,0:16:39.13:0,39,661	0/0:18,0:17:44.87:0,45,747	1/1:1,15:17:36.12:885,36,0	0/0:21,0:21:63.19:0,63,1104	0/0:22,0:22:63.20:0,63,1137	1/1:8,29:38:99:2514,105,0	1/1:1,21:23:63.22:1551,63,0	0/0:14,0:14:42.14:0,42,783	0/0:10,0:10:30.09:0,30,527	0/0:22,0:22:66.21:0,66,1187	0/0:28,0:28:81.28:0,81,1509	0/0:21,0:21:60.21:0,60,1106	1/1:0,22:23:63.22:1550,63,0	1/1:2,31:33:91.55:2219,92,0	0/0:43,0:43:99:0,126,2339	0/0:32,0:32:96.31:0,96,1745	1/1:2,12:15:45.15:1070,45,0	1/1:1,19:20:51.18:1255,51,0	1/1:3,18:24:35.65:883,36,0	0/0:10,0:10:30.10:0,30,554	0/0:12,0:12:33.10:0,33,584	0/0:31,0:31:90.31:0,90,1644	1/1:1,23:24:60.21:1477,60,0	1/1:2,24:27:26.55:1676,27,0	1/1:0,25:26:69.24:1699,69,0	1/1:0,9:9:24.08:591,24,0
chr10	95985082	.	T	TG	2624.49	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=4.796;DP=535;FS=9.247;HRun=1;HaplotypeScore=75.8053;InbreedingCoeff=0.8674;MQ=72.96;MQ0=24;MQRankSum=-0.991;QD=13.19;ReadPosRankSum=2.452;VQSLOD=2.0085;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:73.48:0,73,533	0/0:7,0:7:6.47:0,6,52	0/0:54,0:24:30.40:0,30,336	0/0:40,0:16:24.37:0,24,226	0/0:27,0:27:61.98:0,62,509	1/1:2,4:6:0.11:24,0,0	1/1:15,0:14:23.94:258,24,0	0/0:27,0:25:46.30:0,46,396	0/0:17,0:14:25.97:0,26,168	1/1:16,0:16:27.51:298,28,0	1/1:24,0:22:48.33:458,48,0	1/1:14,0:12:29.90:250,30,0	1/1:12,0:12:15.62:167,16,0	1/1:15,0:15:32.97:299,33,0	0/0:17,0:16:42.74:0,43,339	0/0:21,0:21:31.76:0,32,239	1/1:19,0:19:31.39:306,31,0	1/1:20,0:19:33.15:280,33,0	0/0:16,0:15:38.92:0,39,327	0/0:19,0:19:42.39:0,42,337	0/0:11,0:10:23.95:0,24,198	1/1:0,10:10:17.81:147,18,0	1/1:14,2:16:29.84:260,30,0	1/1:12,0:12:11.75:76,12,0	0/0:15,0:13:29.93:0,30,250	0/1:20,0:19:22.03:22,0,254	0/0:27,0:24:56.65:0,57,410	0/0:7,0:5:15:0,15,130
chr10	95985288	.	T	TA	2503.13	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.681;DP=629;FS=6.371;HRun=4;HaplotypeScore=60.8165;InbreedingCoeff=0.9617;MQ=84.12;MQ0=0;MQRankSum=-1.607;QD=34.77;ReadPosRankSum=1.967;VQSLOD=4.2901;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:96.27:0,96,1088	0/0:3,0:3:9.03:0,9,102	0/0:27,0:27:67.05:0,67,739	0/0:23,0:23:23.01:0,23,543	0/0:18,0:18:51.13:0,51,567	0/0:16,0:16:45.11:0,45,501	0/0:25,0:25:72.20:0,72,808	0/0:23,0:23:63.16:0,63,699	0/0:20,0:20:60.16:0,60,671	0/0:27,0:27:78.21:0,78,876	0/0:14,0:14:42.12:0,42,476	0/0:23,0:22:66.18:0,66,741	0/0:11,0:11:33.09:0,33,373	0/0:22,0:22:63.15:0,63,696	0/0:31,0:31:93.26:0,93,1047	0/0:33,0:33:93.22:0,93,1026	1/1:1,46:47:99:1764,129,0	1/1:1,24:25:63.21:861,63,0	0/0:19,0:19:54.14:0,54,603	0/0:22,0:22:66.19:0,66,748	0/0:28,0:28:78.22:0,78,884	0/0:17,0:17:51.14:0,51,571	0/0:16,0:16:48.14:0,48,544	0/0:25,0:25:72.20:0,72,817	0/0:25,0:25:69.20:0,69,783	0/0:18,0:18:51.13:0,51,569	0/0:29,0:29:87.23:0,87,973	0/0:5,0:5:15.04:0,15,170
chr10	95985755	.	CT	C	1019.51	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=10.973;DP=630;FS=3.179;HRun=10;HaplotypeScore=69.7863;InbreedingCoeff=0.7782;MQ=66.55;MQ0=1;MQRankSum=-0.945;QD=17.28;ReadPosRankSum=-2.791;VQSLOD=3.4094;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:41,1:42:76.20:0,76,1057	0/0:5,0:5:15.03:0,15,158	0/0:11,0:10:18.04:0,18,185	0/1:9,0:9:13.78:14,0,114	0/0:35,0:35:90.19:0,90,962	0/0:30,0:30:81.19:0,81,878	0/0:22,0:22:63.16:0,63,689	1/1:10,23:33:80.92:692,81,0	0/0:15,0:15:42.11:0,42,464	0/0:21,0:21:54.14:0,54,591	0/0:18,0:18:51.05:0,51,524	0/0:16,0:17:38.94:0,39,412	0/0:21,0:21:57.15:0,57,631	0/0:22,0:22:63.16:0,63,688	0/0:16,0:16:42.09:0,42,455	0/0:22,1:23:31.10:0,31,571	0/0:19,0:19:51.56:0,52,543	0/0:19,1:20:28.09:0,28,538	0/0:23,0:24:36.98:0,37,590	0/0:30,0:30:57.52:0,58,837	0/0:28,0:28:69.66:0,70,764	0/0:32,3:35:62.21:0,62,953	0/0:18,1:19:25.05:0,25,492	0/0:12,0:12:33.02:0,33,349	0/0:26,0:26:75.18:0,75,809	0/0:31,0:31:75.04:0,75,810	0/0:28,1:29:37.93:0,38,602	1/1:0,17:17:50.99:443,51,0
chr10	95986672	.	AAAAAAC	A	1632.65	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-0.108;DP=567;FS=44.485;HRun=0;HaplotypeScore=199.9876;InbreedingCoeff=0.9837;MQ=58.89;MQ0=0;MQRankSum=-8.342;QD=35.49;ReadPosRankSum=-1.891;VQSLOD=1.5488;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,19:24:51.17:1065,51,0	0/0:11,0:11:21.54:0,22,689	0/0:19,0:15:24.01:0,24,582	0/0:12,0:11:21.07:0,21,647	0/0:31,0:31:81.27:0,81,2616	0/0:17,0:17:45.15:0,45,1503	0/0:17,0:17:33.11:0,33,1088	1/1:12,6:18:21.07:449,21,0	0/0:16,0:16:36.12:0,36,1157	0/0:15,0:15:39.13:0,39,1303	0/0:21,0:21:57.20:0,57,1877	0/0:24,0:24:63.22:0,63,2105	0/0:18,0:18:45.14:0,45,1348	0/0:21,0:21:51.18:0,51,1620	0/0:20,0:20:45.14:0,45,1428	0/0:21,0:21:45.15:0,45,1486	0/0:27,0:27:75.25:0,75,2357	0/0:21,0:20:45.11:0,45,1407	0/0:25,0:25:60.19:0,60,1918	0/0:25,0:25:60.19:0,60,1862	0/0:20,0:20:42.13:0,42,1316	0/0:17,0:17:36.12:0,36,1154	0/0:22,0:22:57.18:0,57,1668	0/0:24,0:24:63.22:0,63,2105	0/0:21,0:21:45.15:0,45,1440	0/0:30,0:30:69.23:0,69,2214	0/0:26,0:26:75.24:0,75,2263	1/1:0,4:4:12.04:257,12,0
chr10	95986700	.	C	CA	21253.76	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.705;DP=533;FS=2.895;HRun=0;HaplotypeScore=85.9550;InbreedingCoeff=0.9686;MQ=77.82;MQ0=0;MQRankSum=-8.558;QD=42.51;ReadPosRankSum=4.948;VQSLOD=5.2363;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:60.20:953,60,0	1/1:0,6:6:12.04:192,12,0	0/0:15,0:15:36.12:0,36,490	0/0:18,0:17:38.22:0,38,510	1/1:0,30:30:75.26:1198,75,0	1/1:0,16:16:42.14:671,42,0	1/1:0,18:18:45.15:709,45,0	1/1:0,15:15:45.14:695,45,0	1/1:0,11:11:33.11:526,33,0	1/1:0,14:14:39.13:620,39,0	1/1:0,22:22:60.20:959,60,0	1/1:0,23:23:60.20:958,60,0	1/1:0,14:14:33.11:527,33,0	1/1:0,21:21:60.19:933,60,0	1/1:0,17:17:44.97:718,45,0	1/1:0,20:20:57.19:910,57,0	1/1:0,26:26:69.24:1102,69,0	1/1:0,23:22:60.20:958,60,0	1/1:0,21:21:63.19:960,63,0	1/1:0,15:15:45.15:719,45,0	1/1:2,18:20:48.16:767,48,0	1/1:0,15:15:36.12:575,36,0	1/1:0,17:17:45.15:719,45,0	1/1:0,29:29:81.28:1293,81,0	1/1:0,21:21:60.20:958,60,0	1/1:1,23:24:66.23:1054,66,0	1/1:0,29:29:87.30:1388,87,0	1/1:0,5:5:12.04:191,12,0
chr10	95987904	.	GAC	G	984.91	PASS	AB=0.920;AC=17;AF=0.304;AN=56;BaseQRankSum=8.503;DP=318;FS=34.789;HRun=0;HaplotypeScore=65.0554;InbreedingCoeff=-0.1076;MQ=61.64;MQ0=1;MQRankSum=-0.632;QD=5.13;ReadPosRankSum=8.285;VQSLOD=0.0247;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,3:18:99:105,0,104	0/0:6,0:6:11.57:0,12,91	0/1:11,0:9:7.95:8,0,86	0/0:5,0:5:9.01:0,9,86	0/0:7,0:7:11.86:0,12,113	0/1:7,4:11:55.11:99,0,55	0/1:16,1:17:60.07:60,0,136	0/1:12,0:12:16.78:17,0,121	0/0:13,0:13:32.81:0,33,329	0/1:8,0:8:26.43:48,0,26	0/1:4,0:4:9.30:19,0,9	0/1:14,1:15:83.27:104,0,83	0/1:15,3:18:16.46:135,0,16	1/1:14,5:20:26.70:258,27,0	0/0:11,0:11:5.54:0,6,134	0/0:11,0:11:16.79:0,17,265	0/1:19,1:20:24.67:25,0,194	0/0:8,0:8:19.55:0,20,99	0/0:6,0:6:17.85:0,18,150	0/0:11,0:11:17.96:0,18,193	0/0:16,0:16:0.59:0,1,169	0/1:7,2:9:38.91:59,0,39	1/1:5,2:7:15.61:115,16,0	0/1:16,3:19:90.06:97,0,90	0/0:12,0:11:27.69:0,28,237	0/0:11,0:10:22.73:0,23,192	0/0:9,0:9:17.82:0,18,143	0/1:3,0:3:1.89:2,0,37
chr10	95987907	.	ACC	A	2561.22	PASS	AB=0.865;AC=30;AF=0.536;AN=56;BaseQRankSum=-0.898;DP=320;FS=31.641;HRun=12;HaplotypeScore=68.9204;InbreedingCoeff=0.5749;MQ=63.90;MQ0=1;MQRankSum=1.476;QD=11.54;ReadPosRankSum=4.320;VQSLOD=0.0793;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,7:20:24.01:243,24,0	0/0:3,0:3:5.98:0,6,50	0/1:14,0:12:14.97:15,0,61	0/0:6,0:4:1.55:0,2,4	0/0:7,0:7:5.98:0,6,65	1/1:8,3:11:18.02:180,18,0	1/1:11,6:17:17.81:165,18,0	1/1:4,6:11:14.71:134,15,0	0/0:13,0:15:22.92:0,23,177	1/1:2,6:8:18.03:183,18,0	1/1:2,2:4:5.99:61,6,0	1/1:6,9:15:27.04:274,27,0	1/1:9,7:17:35.77:341,36,0	1/1:6,13:20:47.15:468,47,0	0/1:6,2:11:41.96:42,0,42	0/0:12,0:12:20.74:0,21,236	0/1:16,1:20:47.30:47,0,57	0/0:4,0:8:14.97:0,15,53	0/0:5,0:6:2.22:0,2,7	0/0:8,0:8:9:0,9,105	0/1:14,0:15:5.37:5,0,45	1/1:6,3:9:8.97:91,9,0	1/1:2,4:7:20.78:193,21,0	1/1:9,9:19:29.74:286,30,0	0/0:11,0:11:17:0,17,166	0/0:9,0:9:10.50:0,10,81	0/0:11,0:11:11.67:0,12,79	1/1:2,1:3:3:30,3,0
chr10	95987937	.	G	GAGGAAGGAAGGA	22177.18	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=2.654;DP=404;FS=19.855;HRun=0;HaplotypeScore=164.9255;InbreedingCoeff=0.8045;MQ=44.28;MQ0=8;MQRankSum=-5.459;QD=65.23;ReadPosRankSum=3.517;VQSLOD=3.4240;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:0.38:0,0,460	1/1:6,0:6:12.03:497,12,0	0/0:21,0:9:2.93:0,3,102	0/0:8,0:4:6.02:0,6,117	1/1:12,1:13:20.97:521,21,0	1/1:9,3:12:18.02:756,18,0	1/1:18,1:19:15.05:728,15,0	0/0:16,0:16:36.08:0,36,661	1/1:23,0:22:21.07:879,21,0	1/1:8,2:11:24.08:1241,24,0	1/1:1,8:9:18.02:766,18,0	1/1:10,6:16:30.10:1746,30,0	1/1:12,10:22:24.07:1265,24,0	1/1:12,8:21:36.11:1956,36,0	1/1:25,0:25:39.13:1852,39,0	1/1:15,0:15:24.08:807,24,0	1/1:9,6:16:15.05:858,15,0	1/1:3,1:4:9.03:532,9,0	1/1:13,0:12:21.07:602,21,0	1/1:13,0:13:18.05:580,18,0	1/1:12,0:12:30.06:990,30,0	1/1:6,5:10:18.06:801,18,0	1/1:10,2:12:15.05:604,15,0	1/1:16,2:17:15.05:759,15,0	1/1:8,0:8:12.03:482,12,0	1/1:21,1:21:39.07:1760,39,0	1/1:19,0:18:27.08:1195,27,0	0/0:5,0:4:12.04:0,12,363
chr10	95987958	.	ATACAAAGTGAGACCCCCCATCTAAAG	A	4511.52	PASS	AB=0.943;AC=21;AF=0.375;AN=56;BaseQRankSum=10.961;DP=289;FS=41.040;HRun=0;HaplotypeScore=209.9613;InbreedingCoeff=-0.6148;MQ=40.12;MQ0=21;MQRankSum=-4.707;QD=21.08;ReadPosRankSum=2.072;VQSLOD=2.7447;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:27.09:0,27,1815	0/1:4,1:5:99:166,0,618	0/0:20,0:5:11.87:0,12,205	0/0:10,0:4:9:0,9,169	0/1:10,1:11:26.76:27,0,1340	0/1:6,0:6:99:115,0,910	0/1:9,0:9:17.09:17,0,845	0/0:16,0:16:45.14:0,45,1070	0/1:13,1:14:99:145,0,2349	0/1:10,0:10:58.92:59,0,1016	0/1:9,0:9:99:158,0,817	0/1:11,0:11:99:251,0,622	0/1:13,0:13:99:280,0,953	0/1:14,0:14:99:381,0,739	0/1:15,3:18:99:491,0,2232	0/1:6,4:10:99:839,0,1172	0/1:9,0:9:99:268,0,447	0/1:6,0:6:26.54:27,0,838	0/0:3,0:3:9.03:0,9,144	0/1:8,1:9:99:157,0,1515	0/0:11,0:11:33.11:0,33,871	0/1:8,0:7:99:159,0,445	0/1:6,0:6:73.59:74,0,553	0/1:7,0:7:67.45:67,0,633	0/1:5,1:6:99:163,0,1114	0/1:15,1:15:99:179,0,1625	0/1:14,3:17:99:490,0,3236	0/0:5,0:4:12.04:0,12,1098
chr10	95988023	.	A	ACC	5717.88	PASS	AC=50;AF=0.962;AN=52;BaseQRankSum=-1.150;DP=203;FS=0.000;HRun=6;HaplotypeScore=53.7523;InbreedingCoeff=0.2933;MQ=54.39;MQ0=16;MQRankSum=-1.703;QD=32.67;ReadPosRankSum=1.441;VQSLOD=4.1741;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:7:6.01:58,6,0	1/1:3,3:6:9.03:150,9,0	./.	0/0:13,0:6:2.45:0,2,36	1/1:1,10:10:18.06:303,18,0	1/1:2,3:5:15.01:223,15,0	1/1:0,7:6:18.06:304,18,0	./.	1/1:1,10:11:24.05:406,24,0	1/1:0,5:5:15.03:226,15,0	1/1:1,6:7:18.06:304,18,0	1/1:0,3:3:8.99:121,9,0	1/1:2,8:10:24.08:400,24,0	1/1:0,6:6:15.05:251,15,0	1/1:5,8:12:18:304,18,0	1/1:4,5:9:15.04:253,15,0	1/1:0,2:2:6.02:101,6,0	1/1:1,2:3:6.02:102,6,0	1/1:2,1:3:3.01:51,3,0	1/1:3,4:7:9.03:152,9,0	1/1:1,3:4:9.03:152,9,0	1/1:2,8:10:18.06:303,18,0	1/1:1,2:3:6.02:101,6,0	1/1:2,2:4:8.94:107,9,0	1/1:1,5:6:12.04:203,12,0	1/1:2,9:11:27.06:451,27,0	1/1:6,10:17:33.05:538,33,0	1/1:1,4:4:9.03:152,9,0
chr10	95989042	.	A	ACC	418.58	PASS	AB=0.556;AC=9;AF=0.90;AN=10;BaseQRankSum=-1.739;DP=42;FS=0.000;HRun=6;HaplotypeScore=32.8561;MQ=17.83;MQ0=24;MQRankSum=-1.107;QD=32.20;ReadPosRankSum=-1.739;VQSLOD=2.0309;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,1:1:3.01:51,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/1:1,4:5:21.53:188,0,22	./.	./.	1/1:1,2:3:6.02:101,6,0	./.	1/1:0,3:2:6.02:101,6,0	1/1:0,1:1:3.01:51,3,0	./.	./.
chr10	95991224	.	T	TGTGC	8622.06	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=-3.131;DP=617;FS=1.308;HRun=0;HaplotypeScore=137.5227;InbreedingCoeff=0.4567;MQ=62.98;MQ0=5;MQRankSum=0.244;QD=15.13;ReadPosRankSum=3.501;VQSLOD=4.7450;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:38:54.19:1011,54,0	1/1:3,8:12:18.06:430,18,0	0/0:25,0:18:9.42:0,9,82	0/0:22,0:19:9.50:0,9,125	1/1:13,6:20:11.96:287,12,0	1/1:13,0:13:0.35:16,0,0	1/1:36,0:36:32.16:220,32,0	1/1:16,0:15:3:27,3,0	1/1:14,10:26:24.08:570,24,0	1/1:21,0:20:24.37:252,24,0	0/1:7,0:7:0:0,0,0	1/1:31,0:31:3.46:25,3,0	0/1:19,0:19:2.38:9,0,2	1/1:28,0:28:3.35:83,3,0	1/1:13,15:28:30.10:718,30,0	1/1:15,11:26:33.11:773,33,0	1/1:34,0:34:27.67:221,28,0	1/1:23,0:23:31.70:289,32,0	1/1:15,3:18:9.03:215,9,0	1/1:4,3:8:6.02:144,6,0	1/1:25,25:50:54.05:1291,54,0	1/1:6,0:6:5.97:45,6,0	1/1:12,0:12:2.98:21,3,0	1/1:29,0:29:21.01:274,21,0	1/1:9,9:19:24.08:574,24,0	1/1:20,8:29:27.08:575,27,0	1/1:5,7:13:21.07:500,21,0	1/1:4,0:6:3.01:54,3,0
chr10	95991232	.	C	CGTGT	5428.43	PASS	AB=0.998;AC=20;AF=0.357;AN=56;BaseQRankSum=5.955;DP=605;FS=4.970;HRun=0;HaplotypeScore=140.2921;InbreedingCoeff=-0.2913;MQ=58.10;MQ0=6;MQRankSum=3.334;QD=12.92;ReadPosRankSum=13.505;VQSLOD=1.5830;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:3,29:33:54.19:1454,54,0	1/1:11,0:11:3.11:299,3,0	0/0:26,0:18:29.22:0,29,367	0/0:22,0:18:41.67:0,42,424	0/1:18,0:18:99:162,0,147	0/0:9,0:9:10.75:0,11,74	0/0:40,0:40:25.15:0,25,219	0/0:15,0:14:25.40:0,25,194	0/1:24,0:24:99:351,0,137	0/1:20,0:19:61.95:62,0,147	0/0:5,0:5:2.90:0,3,21	0/0:31,0:31:23.36:0,23,190	0/0:18,0:18:25.71:0,26,187	0/1:31,0:31:8.53:9,0,212	0/1:26,0:26:99:425,0,141	0/1:23,1:24:76.81:541,0,77	0/1:31,0:31:1.63:2,0,209	0/1:22,0:22:53.17:85,0,53	0/1:16,0:15:99:135,0,184	0/1:7,0:7:27.96:93,0,28	0/1:58,0:57:99:757,0,381	0/0:6,0:6:2.80:0,3,27	0/0:13,0:13:16.64:0,17,124	0/1:31,0:31:73.09:73,0,129	0/1:18,0:18:99:339,0,134	0/1:26,0:26:99:303,0,234	0/1:17,0:16:99:320,0,121	0/1:7,0:7:20.16:20,0,68
chr10	95992103	.	A	AAC	6118.59	PASS	AB=0.638;AC=20;AF=0.357;AN=56;BaseQRankSum=-11.101;DP=741;FS=1.233;HRun=0;HaplotypeScore=101.3613;InbreedingCoeff=0.1660;MQ=66.50;MQ0=19;MQRankSum=0.591;QD=16.45;ReadPosRankSum=2.288;VQSLOD=4.9578;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:40:5.70:29,6,0	0/0:6,0:7:14.88:0,15,151	0/0:43,0:19:12.03:0,12,131	0/0:42,0:20:10.26:0,10,101	0/0:21,0:22:53.96:0,54,578	0/1:10,9:20:96.88:249,0,97	0/1:17,18:36:99:548,0,128	1/1:12,0:16:14.64:80,15,0	0/0:21,0:23:47.80:0,48,511	1/1:8,13:21:39.13:595,39,0	0/1:10,8:20:19.06:330,0,19	0/1:13,19:35:92.65:637,0,93	0/1:9,11:22:40.30:469,0,40	0/1:6,15:25:23.66:559,0,24	0/0:22,0:24:50.80:0,51,535	0/0:28,0:31:12.53:0,13,496	0/1:14,15:29:99:594,0,103	1/1:5,14:20:36.12:558,36,0	0/0:10,0:12:17.37:0,17,161	0/0:15,0:18:20.89:0,21,219	0/0:75,0:75:89.24:0,89,1299	0/1:7,17:26:14.03:522,0,14	0/1:4,2:8:25.47:84,0,25	0/1:19,25:45:34.08:848,0,34	0/0:20,0:20:54.14:0,54,608	0/0:28,0:31:68.69:0,69,722	0/0:19,0:19:36.10:0,36,413	1/1:1,0:3:5.09:19,5,0
chr10	95992560	.	GA	G	1548.44	PASS	AB=0.754;AC=37;AF=0.661;AN=56;BaseQRankSum=-0.717;DP=602;FS=1.270;HRun=17;HaplotypeScore=66.2482;InbreedingCoeff=-0.1226;MQ=53.15;MQ0=53;MQRankSum=2.382;QD=3.04;ReadPosRankSum=2.511;VQSLOD=-0.6209;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:21:22.19:0,22,125	1/1:2,5:8:13.64:70,14,0	0/0:37,0:4:5.30:0,5,25	0/0:32,1:9:4.57:0,5,57	0/1:21,1:22:24.19:24,0,25	0/1:10,8:18:12.36:38,0,12	1/1:6,10:15:2.43:110,2,0	0/1:28,4:29:16.99:17,0,147	1/1:6,11:16:10.50:55,11,0	1/1:10,2:14:7.67:37,8,0	1/1:4,6:9:5.71:33,6,0	0/1:11,12:23:48.28:58,0,48	1/1:7,8:16:10.35:56,10,0	0/1:14,5:19:12.82:30,0,13	1/1:6,14:21:16.68:92,17,0	1/1:12,4:16:22.92:121,23,0	1/1:24,14:42:62.41:311,62,0	0/1:15,15:31:0.35:85,0,0	0/1:15,11:25:37.19:112,0,37	0/1:14,2:16:22.34:55,0,22	1/1:6,6:12:1.55:39,2,0	0/1:9,6:16:13.18:28,0,13	1/1:3,4:7:1.94:6,2,0	0/1:10,5:16:10.31:42,0,10	0/1:9,9:19:20.89:57,0,21	1/1:12,12:25:11.86:145,12,0	0/1:12,17:30:36.62:77,0,37	0/1:15,0:16:9.69:10,0,104
chr10	95995041	.	C	CTTTT	8768.73	PASS	AB=0.790;AC=49;AF=0.875;AN=56;BaseQRankSum=-0.711;DP=494;FS=11.370;HRun=13;HaplotypeScore=109.0468;InbreedingCoeff=0.4145;MQ=64.68;MQ0=0;MQRankSum=-4.900;QD=18.86;ReadPosRankSum=-3.741;VQSLOD=1.3279;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:33:42.37:297,42,0	1/1:3,0:7:15.05:266,15,0	0/0:17,0:12:14.85:0,15,172	0/0:12,0:6:3.42:0,3,30	1/1:33,0:34:63.02:715,63,0	1/1:8,3:13:13.47:176,13,0	1/1:8,9:20:25.28:371,25,0	0/1:18,0:40:62.81:302,0,63	1/1:13,1:16:32.24:408,32,0	1/1:12,2:21:33.09:574,33,0	1/1:2,6:15:29.89:413,30,0	1/1:8,3:13:15.05:237,15,0	1/1:2,7:9:3.01:66,3,0	1/1:4,1:6:8.99:123,9,0	1/1:16,0:18:26.08:477,26,0	1/1:10,0:15:11.25:181,11,0	1/1:10,2:18:17.97:320,18,0	1/1:9,1:10:2.41:291,2,0	1/1:10,0:15:29.31:467,29,0	1/1:25,0:33:66.12:749,66,0	0/1:4,0:4:0:0,0,0	1/1:5,6:12:23.97:357,24,0	1/1:7,4:17:18.06:339,18,0	1/1:4,5:9:9.03:189,9,0	1/1:6,0:11:7.58:125,8,0	1/1:25,0:27:64.60:968,65,0	1/1:9,0:14:14.26:241,14,0	0/1:18,0:27:27.70:114,0,28
chr10	95995448	.	AT	A	5752.77	PASS	AB=0.634;AC=27;AF=0.482;AN=56;BaseQRankSum=8.802;DP=595;FS=10.564;HRun=10;HaplotypeScore=61.0174;InbreedingCoeff=0.9073;MQ=62.36;MQ0=11;MQRankSum=0.078;QD=17.59;ReadPosRankSum=0.725;VQSLOD=4.8635;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,31:34:80.97:703,81,0	1/1:0,7:7:18:156,18,0	0/0:7,0:3:3:0,3,29	0/0:20,0:13:11.90:0,12,204	1/1:16,11:24:47.94:411,48,0	0/0:23,1:25:17.12:0,17,617	0/0:19,0:20:53.98:0,54,578	1/1:3,32:35:76.10:784,76,0	1/1:6,16:22:56.97:491,57,0	0/0:16,0:15:39.10:0,39,424	0/0:25,0:25:60.10:0,60,631	0/0:13,0:14:41.95:0,42,445	0/0:14,0:14:35.67:0,36,364	0/0:10,0:9:24.06:0,24,266	1/1:6,25:31:14.85:357,15,0	1/1:5,27:32:62.98:547,63,0	0/0:34,0:35:98.93:0,99,1056	0/0:26,0:25:50.15:0,50,709	1/1:7,17:23:18.20:383,18,0	1/1:7,18:25:41.96:364,42,0	1/1:2,11:11:26.99:234,27,0	0/0:15,0:15:29.87:0,30,312	0/0:18,0:15:39.11:0,39,431	0/0:21,0:20:51.14:0,51,564	1/1:1,16:18:38.02:318,38,0	0/1:11,15:24:6.38:409,0,6	1/1:3,15:16:41.98:365,42,0	1/1:6,8:13:26.97:230,27,0
chr10	95995542	.	TTC	T	427.68	PASS	AB=0.982;AC=16;AF=0.286;AN=56;BaseQRankSum=-1.510;DP=534;FS=11.116;HRun=0;HaplotypeScore=105.1869;InbreedingCoeff=0.1624;MQ=47.76;MQ0=39;MQRankSum=0.513;QD=1.56;ReadPosRankSum=1.876;VQSLOD=1.4006;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:9.53:70,10,0	0/1:8,1:8:18.01:47,0,18	0/0:15,1:8:7.85:0,8,99	0/0:14,0:2:1.23:0,1,3	0/1:28,1:22:19.54:37,0,20	0/0:10,0:8:11.30:0,11,43	0/0:18,0:13:23.86:0,24,91	0/1:28,0:23:9.49:9,0,85	0/1:14,0:11:13.43:32,0,13	0/0:28,0:25:53.90:0,54,280	0/0:24,0:23:32.16:0,32,139	0/0:10,0:8:8.89:0,9,36	0/0:12,0:10:15.58:0,16,87	0/0:10,0:11:11.20:0,11,39	1/1:30,0:30:14.73:136,15,0	1/1:19,0:17:31.10:114,31,0	0/0:27,0:24:17.42:0,17,184	0/0:15,0:12:15.95:0,16,49	0/1:21,0:18:2.47:2,0,138	0/1:20,0:16:22.29:22,0,68	0/0:15,0:11:0.68:0,1,82	0/0:16,0:15:26:0,26,110	0/0:24,0:21:22.88:0,23,113	0/0:19,0:18:24.49:0,24,102	0/1:17,0:14:0.44:31,0,0	0/1:22,0:21:1.65:2,0,131	0/1:19,1:16:63.14:66,0,63	0/1:22,0:18:20.77:21,0,40
chr10	95995544	.	CTT	C	5571.59	PASS	AB=0.648;AC=50;AF=0.893;AN=56;BaseQRankSum=-3.011;DP=540;FS=12.572;HRun=14;HaplotypeScore=93.7345;InbreedingCoeff=0.4729;MQ=51.65;MQ0=35;MQRankSum=1.971;QD=11.12;ReadPosRankSum=6.993;VQSLOD=2.0624;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,16:23:41.28:466,41,0	1/1:4,4:8:17.56:149,18,0	0/0:20,0:12:16.27:0,16,168	0/0:17,0:3:4.77:0,5,25	1/1:13,14:22:35.91:331,36,0	1/1:5,0:8:16.45:71,16,0	1/1:8,0:15:24.04:114,24,0	1/1:11,16:23:29.52:341,30,0	1/1:7,7:11:2.96:147,3,0	1/1:8,0:24:43.72:188,44,0	1/1:11,0:24:44.36:191,44,0	1/1:3,0:9:22.43:96,22,0	1/1:8,0:12:10.19:61,10,0	1/1:2,0:10:21.95:95,22,0	1/1:6,22:29:46.58:586,47,0	1/1:3,16:17:45.05:415,45,0	1/1:12,0:22:24.64:149,25,0	1/1:5,0:13:22.04:110,22,0	1/1:10,8:16:14.82:186,15,0	1/1:8,11:16:10.37:225,10,0	0/1:8,4:12:2.36:89,0,2	1/1:9,0:16:0.84:71,1,0	0/1:8,0:22:4.09:102,0,4	1/1:7,0:19:37.01:171,37,0	1/1:6,11:14:26.96:250,27,0	1/1:9,12:22:47.40:404,47,0	1/1:11,9:17:3.08:223,3,0	1/1:9,12:18:32.80:341,33,0
chr10	95995605	.	ACT	A	13902.32	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=6.231;DP=521;FS=0.469;HRun=0;HaplotypeScore=80.2618;InbreedingCoeff=0.9795;MQ=51.63;MQ0=7;MQRankSum=2.434;QD=34.41;ReadPosRankSum=4.726;VQSLOD=7.2412;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.29:0,84,1511	1/1:0,5:5:15.05:210,15,0	0/0:12,0:7:15.02:0,15,223	0/0:15,0:6:15.05:0,15,241	1/1:1,16:16:30.10:419,30,0	1/1:0,18:18:48.16:672,48,0	1/1:2,21:23:57.19:798,57,0	0/0:42,0:36:96.31:0,96,1636	1/1:1,21:21:51.09:671,51,0	1/1:0,19:18:51.17:714,51,0	1/1:4,11:14:39.08:506,39,0	1/1:0,23:23:66.18:901,66,0	1/1:1,17:18:48.16:669,48,0	1/1:2,13:15:39.13:546,39,0	1/1:1,24:25:66.22:923,66,0	1/1:0,25:24:60:818,60,0	1/1:1,18:19:45.15:627,45,0	1/1:0,24:24:66.22:921,66,0	1/1:2,13:14:36.12:503,36,0	1/1:1,16:16:42.14:587,42,0	1/1:1,17:18:45.15:630,45,0	1/1:0,11:11:27.09:378,27,0	1/1:2,8:9:18.02:229,18,0	1/1:0,19:19:51.09:670,51,0	1/1:1,5:5:12.04:168,12,0	1/1:5,14:19:45.15:629,45,0	1/1:0,21:21:51.17:713,51,0	0/0:19,0:19:54.19:0,54,972
chr10	95995843	.	CTT	C	3075.16	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=-4.246;DP=569;FS=7.397;HRun=12;HaplotypeScore=80.8643;InbreedingCoeff=0.8489;MQ=63.83;MQ0=5;MQRankSum=1.493;QD=12.65;ReadPosRankSum=5.872;VQSLOD=1.8642;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:41:59.78:0,60,751	0/0:5,0:8:14.34:0,14,132	0/0:27,0:9:8.04:0,8,89	0/1:22,0:9:18.39:18,0,65	0/0:26,0:26:53.23:0,53,485	1/1:2,11:13:18.02:183,18,0	1/1:4,11:14:18.28:235,18,0	0/0:24,0:24:47.15:0,47,611	0/0:5,0:16:18.04:0,18,212	1/1:5,14:20:47.76:453,48,0	1/1:8,16:24:32.05:371,32,0	1/1:5,12:17:24:236,24,0	1/1:12,3:15:33.03:327,33,0	1/1:6,8:14:9.13:113,9,0	0/0:5,0:17:6.01:0,6,73	0/0:5,0:21:15.02:0,15,152	1/1:7,27:34:47.67:486,48,0	1/1:8,14:22:13.70:202,14,0	0/0:12,0:23:39.24:0,39,347	0/0:18,0:23:41.49:0,41,364	0/0:9,0:10:19.22:0,19,169	1/1:3,11:13:27.04:268,27,0	1/1:4,10:13:14.39:132,14,0	1/1:3,16:19:27.04:269,27,0	0/0:13,0:16:35.83:0,36,350	0/0:7,2:26:0.77:0,1,448	0/0:7,0:23:29.50:0,29,269	0/0:16,0:16:24.51:0,25,306
chr10	95995856	.	C	CT	384.40	PASS	AB=0.984;AC=10;AF=0.179;AN=56;BaseQRankSum=-3.720;DP=575;FS=1.522;HRun=13;HaplotypeScore=84.7350;InbreedingCoeff=0.3535;MQ=59.95;MQ0=6;MQRankSum=-1.543;QD=2.27;ReadPosRankSum=-1.424;VQSLOD=-0.3638;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,28:44:8.52:190,9,0	0/0:6,0:6:5.87:0,6,38	0/0:25,0:6:6.79:0,7,30	0/0:23,0:9:1.71:0,2,6	0/1:32,0:30:19.18:19,0,110	0/0:20,0:20:8.61:0,9,169	0/0:19,0:21:48.57:0,49,316	1/1:10,8:20:20.29:195,20,0	0/0:17,0:17:9.51:0,10,71	0/1:20,0:20:3.74:4,0,114	0/0:22,0:24:21.55:0,22,134	0/0:14,0:14:17.01:0,17,106	0/0:12,0:13:19.66:0,20,121	0/0:10,0:11:9.76:0,10,52	0/0:19,0:18:11.79:0,12,82	0/0:18,0:18:10.42:0,10,61	0/0:33,0:34:48.77:0,49,325	0/0:25,0:24:38.53:0,39,262	0/0:17,0:17:16:0,16,89	0/0:24,0:22:8.04:0,8,73	0/0:9,0:10:4.15:0,4,13	0/0:12,0:11:7.42:0,7,45	0/1:18,0:15:7.70:8,0,49	0/0:19,0:18:3.92:0,4,135	0/1:14,1:15:31.66:32,0,58	0/0:28,1:30:13.14:0,13,191	0/0:22,0:21:8.67:0,9,65	1/1:5,11:16:9.01:82,9,0
chr10	95995948	.	C	CTTT	5052.69	PASS	AB=0.773;AC=50;AF=0.893;AN=56;BaseQRankSum=0.533;DP=523;FS=8.027;HRun=14;HaplotypeScore=93.8564;InbreedingCoeff=0.4946;MQ=63.59;MQ0=10;MQRankSum=-0.959;QD=10.75;ReadPosRankSum=-0.538;VQSLOD=1.9485;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:32.49:0,32,502	1/1:2,0:4:5.98:46,6,0	0/1:24,0:5:15.17:15,0,24	0/0:20,0:7:9.15:0,9,52	1/1:7,2:31:55.20:447,55,0	1/1:3,0:21:10.62:246,11,0	1/1:10,0:26:26.90:204,27,0	1/1:8,0:24:20.99:89,21,0	1/1:2,0:11:13.20:93,13,0	1/1:5,1:20:38.88:354,39,0	1/1:18,0:24:27.52:182,28,0	1/1:4,1:11:10.54:102,11,0	1/1:5,0:13:14.96:142,15,0	1/1:3,0:13:14.94:113,15,0	1/1:5,0:18:21.63:144,22,0	0/1:2,1:12:6.83:161,0,7	1/1:15,1:31:64.08:557,64,0	1/1:16,0:25:53.16:369,53,0	1/1:10,0:17:12.34:79,12,0	1/1:4,1:16:26.87:241,27,0	1/1:2,0:5:7.22:48,7,0	1/1:3,0:18:28.35:208,28,0	1/1:4,0:16:25.82:196,26,0	1/1:6,1:12:19.28:154,19,0	1/1:7,2:18:28.36:254,28,0	1/1:22,0:25:30.83:313,31,0	1/1:2,3:16:26.43:271,26,0	1/1:6,0:12:1.25:27,1,0
chr10	95996687	.	G	GTA	377.57	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=0.059;DP=670;FS=17.420;HRun=0;HaplotypeScore=134.0091;InbreedingCoeff=0.9580;MQ=63.86;MQ0=2;MQRankSum=-1.146;QD=20.98;ReadPosRankSum=-1.547;VQSLOD=2.5033;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:15.05:305,15,0	0/0:13,0:13:36.12:0,36,584	0/0:31,0:25:72.24:0,72,1075	0/0:28,0:21:54.08:0,54,817	0/0:24,0:24:69.22:0,69,1078	0/0:19,0:18:49.41:0,49,777	0/0:38,1:39:56.56:0,57,1727	./.	0/0:26,0:26:72.24:0,72,1151	0/0:27,0:27:75.25:0,75,1202	0/0:11,0:11:21.07:0,21,342	0/0:26,0:26:78.27:0,78,1272	0/0:24,0:23:57.19:0,57,930	0/0:32,0:32:90.28:0,90,1413	0/0:28,0:28:81.25:0,81,1274	0/0:29,0:29:81.26:0,81,1297	0/0:35,1:35:99:0,105,1684	0/0:39,0:39:99:0,117,1909	0/0:10,0:10:30.09:0,30,467	0/0:17,0:17:51.17:0,51,832	0/0:59,1:59:99:0,172,2764	0/0:20,0:20:45.09:0,45,653	0/0:14,0:14:36.11:0,36,562	0/0:30,0:30:90.29:0,90,1444	0/0:25,0:25:69.20:0,69,1091	0/0:17,0:17:48.16:0,48,777	0/0:26,0:26:69.22:0,69,1102	1/1:0,3:3:9.03:183,9,0
chr10	95997003	.	GTC	G	406.26	PASS	AB=0.622;AC=18;AF=0.692;AN=26;BaseQRankSum=5.092;DP=322;FS=17.319;HRun=0;HaplotypeScore=14.4768;InbreedingCoeff=0.2382;MQ=23.59;MQ0=133;MQRankSum=0.157;QD=3.39;ReadPosRankSum=-1.071;VQSLOD=-0.1919;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:22:36.11:0,36,640	./.	./.	./.	./.	1/1:5,9:7:3.01:44,3,0	./.	0/0:26,0:14:39.04:0,39,618	./.	0/1:5,5:4:47.11:79,0,47	./.	./.	1/1:1,10:8:3.01:44,3,0	1/1:6,2:3:3.01:36,3,0	./.	1/1:3,0:3:2.98:22,3,0	1/1:19,0:6:2.78:18,3,0	1/1:8,9:5:3.01:42,3,0	./.	./.	1/1:13,0:6:2.97:20,3,0	./.	./.	1/1:8,2:5:2.97:20,3,0	./.	0/1:4,11:7:38.15:192,0,38	./.	0/0:8,0:3:9.03:0,9,168
chr10	95997271	.	AAGGGGTCCC	A	2185.54	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.274;DP=703;FS=3.595;HRun=0;HaplotypeScore=187.9284;InbreedingCoeff=0.9026;MQ=87.09;MQ0=0;MQRankSum=-5.179;QD=66.23;ReadPosRankSum=-2.939;VQSLOD=3.1207;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,4870	0/0:13,0:13:39.13:0,39,1933	0/0:24,0:24:72.23:0,72,3149	0/0:26,0:26:75.18:0,75,3036	0/0:23,0:23:69.24:0,69,3160	0/0:17,0:17:51.18:0,51,2398	0/0:28,0:28:84.22:0,84,3841	1/1:3,28:29:78.24:2200,78,0	0/0:34,0:33:99:0,99,4777	0/0:27,0:27:78.27:0,78,3828	0/0:12,0:12:36.11:0,36,1536	0/0:24,0:24:72.22:0,72,2965	0/0:20,0:20:60.21:0,60,2884	0/0:39,0:39:99:0,117,5523	0/0:34,0:34:99:0,102,4877	0/0:33,0:33:93.31:0,93,4466	0/0:21,0:21:63.22:0,63,3043	0/0:23,0:23:69.24:0,69,3358	0/0:16,0:15:45.15:0,45,2107	0/0:22,0:22:60.21:0,60,2801	0/0:59,0:58:99:0,175,8244	0/0:23,0:23:60.07:0,60,2728	0/0:19,0:19:57.20:0,57,2717	0/0:25,0:25:75.26:0,75,3601	0/0:23,0:23:66.23:0,66,2952	0/0:36,0:34:99:0,102,4877	0/0:14,0:13:39.12:0,39,1779	1/1:0,2:2:3.01:95,3,0
chr10	95999537	.	T	TG	1643.92	PASS	AB=0.769;AC=20;AF=0.357;AN=56;BaseQRankSum=-7.504;DP=559;FS=13.955;HRun=10;HaplotypeScore=101.4958;InbreedingCoeff=0.4631;MQ=76.85;MQ0=4;MQRankSum=0.283;QD=6.45;ReadPosRankSum=-0.497;VQSLOD=0.4335;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:49:50.75:0,51,173	0/0:8,0:8:23.11:0,23,157	0/0:41,0:27:4:0,4,89	0/1:22,0:11:14.34:14,0,18	0/0:19,0:21:49:0,49,337	1/1:8,8:17:1.12:169,1,0	1/1:17,9:27:17.68:325,18,0	0/0:28,0:28:13.49:0,13,257	0/0:21,0:22:36.29:0,36,251	0/1:6,7:13:8.14:79,0,8	0/1:16,2:18:0.31:94,0,0	1/1:10,1:11:3.01:32,3,0	1/1:5,8:13:6.02:64,6,0	0/1:9,6:15:4.64:54,0,5	0/0:24,0:25:49.81:0,50,340	0/0:17,0:17:39.74:0,40,273	0/1:20,19:39:66:236,0,66	1/1:10,17:28:29.89:288,30,0	0/0:16,0:16:27.74:0,28,192	0/0:16,0:17:28.30:0,28,203	0/0:16,0:17:27.20:0,27,175	1/1:3,10:13:4.71:177,5,0	1/1:11,1:12:20.91:183,21,0	0/1:14,13:27:17.22:109,0,17	0/0:8,0:8:23.33:0,23,178	0/0:14,0:14:10.07:0,10,49	0/0:17,0:17:41.41:0,41,326	0/0:2,0:2:5.99:0,6,49
chr10	96001930	.	T	TTTTC	24158.86	PASS	AB=0.806;AC=50;AF=0.893;AN=56;BaseQRankSum=-6.573;DP=592;FS=11.979;HRun=0;HaplotypeScore=84.1941;InbreedingCoeff=0.5973;MQ=68.93;MQ0=0;MQRankSum=-4.182;QD=43.77;ReadPosRankSum=4.446;VQSLOD=4.2991;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:19.64:160,0,20	1/1:4,12:16:33.11:813,33,0	0/0:16,0:15:23.90:0,24,311	0/0:24,0:21:22.82:0,23,358	1/1:7,31:39:84.01:1713,84,0	1/1:7,17:25:45.15:1088,45,0	1/1:3,8:11:24.08:557,24,0	1/1:30,0:29:39.18:573,39,0	1/1:7,12:20:27.09:649,27,0	1/1:3,24:28:75.25:1747,75,0	1/1:4,26:30:78.02:1632,78,0	0/1:4,7:11:23.81:562,0,24	1/1:3,12:15:30.10:739,30,0	1/1:5,8:13:21.07:517,21,0	1/1:3,16:19:33.11:813,33,0	1/1:5,19:24:42.14:1013,42,0	1/1:3,27:31:69.23:1653,69,0	1/1:8,12:20:27.09:665,27,0	1/1:8,13:24:53.98:1091,54,0	1/1:5,17:22:48.16:1140,48,0	1/1:5,18:23:57.19:1329,57,0	1/1:8,13:23:41.97:832,42,0	1/1:2,20:23:45.05:1089,45,0	1/1:2,10:12:21.07:517,21,0	1/1:3,14:18:36.12:887,36,0	1/1:9,20:29:63.15:1416,63,0	1/1:2,16:19:36.12:886,36,0	1/1:15,0:15:6:78,6,0
chr10	96001942	.	C	CTTTCTTTTT	8099.38	PASS	AB=0.976;AC=32;AF=0.571;AN=56;BaseQRankSum=7.496;DP=559;FS=24.628;HRun=0;HaplotypeScore=182.1758;InbreedingCoeff=-0.5099;MQ=71.47;MQ0=0;MQRankSum=-2.178;QD=15.46;ReadPosRankSum=12.028;VQSLOD=1.4017;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:3,7:14:12.44:460,0,12	0/1:18,0:18:99:200,0,150	0/0:13,0:14:9.72:0,10,551	0/0:21,0:18:29.47:0,29,594	0/1:35,0:35:39.05:556,0,39	0/1:25,0:25:98.72:254,0,99	0/1:12,0:12:59.21:124,0,59	1/1:28,0:27:68.90:1015,69,0	0/1:14,0:14:12.62:157,0,13	0/1:27,0:27:12.11:493,0,12	0/1:30,0:30:46.32:507,0,46	0/1:13,0:13:99:142,0,154	0/1:15,0:15:76.97:186,0,77	1/1:9,0:9:0.97:135,1,0	0/1:21,0:21:53.05:206,0,53	0/1:21,0:21:20.93:295,0,21	0/1:32,0:32:30.06:426,0,30	0/1:17,0:17:76.03:163,0,76	0/1:21,0:21:95.17:344,0,95	1/1:19,0:19:4.25:355,4,0	0/1:23,0:23:68.82:372,0,69	0/1:22,0:22:99:223,0,184	0/1:23,0:23:13.10:266,0,13	1/1:11,0:11:20.92:158,21,0	0/1:18,0:18:91.37:268,0,91	1/1:24,0:24:15.25:419,15,0	0/1:21,0:21:48.23:225,0,48	1/1:3,0:9:6:150,6,0
chr10	96003767	.	GA	G	4811.36	PASS	AB=0.558;AC=50;AF=0.893;AN=56;BaseQRankSum=-4.946;DP=385;FS=19.329;HRun=10;HaplotypeScore=45.5048;InbreedingCoeff=0.5666;MQ=84.71;MQ0=5;MQRankSum=-2.512;QD=15.98;ReadPosRankSum=5.106;VQSLOD=3.4819;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:16.01:164,16,0	1/1:0,4:4:9:78,9,0	0/0:47,0:20:27.36:0,27,190	0/0:35,0:15:12.10:0,12,120	1/1:4,7:11:20.99:182,21,0	1/1:2,10:12:23.99:208,24,0	1/1:2,9:10:20.99:182,21,0	1/1:28,0:28:27.92:194,28,0	0/1:2,6:8:6.48:112,0,6	1/1:3,9:12:26.99:234,27,0	1/1:3,6:9:14.99:130,15,0	1/1:3,5:8:12:104,12,0	1/1:2,8:10:23.99:208,24,0	1/1:3,6:9:12:104,12,0	1/1:1,5:6:12:104,12,0	1/1:1,11:12:23.99:208,24,0	1/1:1,27:28:68.99:599,69,0	1/1:4,21:25:50.99:443,51,0	1/1:1,20:22:61.94:507,62,0	1/1:2,4:6:12:104,12,0	1/1:1,5:6:15:130,15,0	1/1:0,2:2:6:52,6,0	1/1:1,3:4:9:78,9,0	1/1:1,1:2:5.93:40,6,0	1/1:4,8:12:14.99:130,15,0	0/1:2,10:12:0.19:226,0,0	1/1:4,11:15:23.99:208,24,0	1/1:6,0:6:16.86:80,17,0
chr10	96003777	.	AT	A	1803.40	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=-3.586;DP=382;FS=5.658;HRun=3;HaplotypeScore=55.8536;InbreedingCoeff=0.4926;MQ=77.12;MQ0=6;MQRankSum=-2.912;QD=15.96;ReadPosRankSum=4.314;VQSLOD=3.1715;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:47.97:623,48,0	0/0:5,0:5:0.71:0,1,37	0/0:51,0:19:15.24:0,15,231	0/0:37,0:13:17.38:0,17,151	1/1:7,0:7:2.86:20,3,0	0/0:12,0:12:4.42:0,4,48	0/0:9,0:8:1.42:0,1,4	1/1:1,34:35:99:1068,102,0	1/1:6,0:6:0.34:1,0,0	0/0:10,0:10:13.45:0,13,43	0/0:8,0:8:7.23:0,7,70	0/0:6,0:6:2.19:0,2,5	0/0:8,0:8:4.37:0,4,10	0/0:8,0:8:7.64:0,8,53	0/1:5,0:4:0.35:1,0,0	0/0:11,0:11:1.83:0,2,5	0/0:32,0:32:4.29:0,4,104	0/1:26,0:26:1.27:1,0,71	0/0:27,0:27:29.68:0,30,204	1/1:4,0:4:0.13:1,0,0	0/0:5,0:5:1.83:0,2,4	0/0:2,0:2:1.36:0,1,3	0/0:3,0:3:1.41:0,1,3	1/1:2,0:2:0.47:1,0,0	0/0:10,0:10:10.01:0,10,61	0/0:12,0:12:9.69:0,10,76	0/0:13,0:13:3.49:0,3,42	1/1:0,6:6:18.06:222,18,0
chr10	96004557	.	GGACAGC	G	16171.41	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=6.048;DP=439;FS=1.501;HRun=0;HaplotypeScore=137.3858;InbreedingCoeff=0.9258;MQ=32.34;MQ0=20;MQRankSum=-4.229;QD=47.15;ReadPosRankSum=4.874;VQSLOD=4.6266;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:16:20.55:0,21,647	1/1:1,7:7:21.07:484,21,0	0/0:14,0:4:11.99:0,12,335	0/0:12,0:1:3.01:0,3,105	1/1:1,10:11:24.08:553,24,0	1/1:2,12:13:33.11:760,33,0	1/1:1,8:9:21.07:484,21,0	0/0:31,0:21:48.12:0,48,1558	1/1:2,16:18:30.06:642,30,0	1/1:0,10:9:24.08:553,24,0	1/1:2,14:15:33.11:759,33,0	1/1:2,20:22:48.16:1105,48,0	1/1:3,16:17:42.14:967,42,0	1/1:4,13:16:30.10:691,30,0	1/1:2,20:21:51.18:1175,51,0	1/1:6,21:27:48.12:1056,48,0	1/1:4,8:10:15.05:344,15,0	1/1:1,8:9:24.08:553,24,0	1/1:3,7:10:21.07:484,21,0	1/1:4,13:16:39.13:890,39,0	1/1:2,5:4:12.04:276,12,0	1/1:3,15:18:30.10:691,30,0	1/1:3,13:14:33.11:760,33,0	1/1:4,4:6:11.67:227,12,0	1/1:4,9:13:24.08:553,24,0	1/1:3,23:25:66.18:1472,66,0	1/1:4,10:14:30.10:691,30,0	0/0:20,0:13:30.10:0,30,1049
chr10	96004608	.	AAAAAAAGATC	A	17501.11	PASS	AB=0.542;AC=45;AF=0.804;AN=56;BaseQRankSum=0.535;DP=346;FS=25.230;HRun=0;HaplotypeScore=150.2568;InbreedingCoeff=0.7827;MQ=51.31;MQ0=2;MQRankSum=-6.300;QD=71.43;ReadPosRankSum=3.709;VQSLOD=2.7954;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:39.13:0,39,766	1/1:0,3:3:9.03:274,9,0	0/0:14,0:7:15.45:0,15,439	0/0:8,0:5:15.05:0,15,474	1/1:0,20:20:51.18:1555,51,0	1/1:0,5:5:15.05:471,15,0	1/1:0,8:8:15.05:467,15,0	0/0:43,0:40:99:0,117,2650	1/1:0,3:2:6.02:188,6,0	1/1:0,15:13:36.11:935,36,0	1/1:0,19:18:48.16:1465,48,0	1/1:0,6:6:18.06:541,18,0	1/1:0,9:9:27.09:848,27,0	1/1:0,4:4:12.04:355,12,0	1/1:1,9:10:30.10:837,30,0	1/1:1,10:10:30.10:902,30,0	1/1:0,2:2:2.99:94,3,0	0/1:2,11:13:40.50:759,0,41	1/1:0,5:5:12.04:241,12,0	1/1:0,20:20:57.20:1617,57,0	1/1:0,8:8:12.04:337,12,0	1/1:0,7:7:21.07:654,21,0	1/1:0,16:15:36.12:1130,36,0	1/1:1,7:8:12:262,12,0	1/1:1,18:18:19.23:1106,19,0	1/1:0,14:14:42.14:1240,42,0	1/1:0,20:20:42.11:1223,42,0	0/0:17,0:16:39.13:0,39,960
chr10	96004611	.	AAAAG	A	6013.26	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=5.126;DP=348;FS=0.922;HRun=0;HaplotypeScore=157.0661;InbreedingCoeff=0.7182;MQ=54.82;MQ0=2;MQRankSum=-3.862;QD=18.45;ReadPosRankSum=4.496;VQSLOD=4.6094;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:36.07:594,36,0	1/1:3,0:3:8.97:72,9,0	0/0:14,0:9:23.81:0,24,274	0/0:8,0:5:14.87:0,15,141	1/1:20,0:20:50.88:421,51,0	1/1:7,0:7:20.82:161,21,0	1/1:8,0:8:14.99:125,15,0	1/1:42,1:41:27.18:480,27,0	1/1:4,0:3:8.94:69,9,0	1/1:15,0:13:32.05:246,32,0	1/1:19,0:18:47.92:402,48,0	1/1:7,0:7:20.90:163,21,0	1/1:9,0:9:26.99:231,27,0	1/1:4,0:4:11.95:96,12,0	1/1:10,0:10:29.79:228,30,0	1/1:11,0:10:29.92:248,30,0	1/1:2,0:2:2.99:26,3,0	1/1:12,0:12:2.70:178,3,0	1/1:5,0:5:9.27:50,9,0	1/1:20,0:20:56.68:444,57,0	1/1:8,0:8:11.92:93,12,0	1/1:7,0:7:20.98:176,21,0	1/1:16,0:15:35.99:308,36,0	1/1:8,0:8:8.92:68,9,0	1/1:18,0:17:35.97:304,36,0	1/1:14,0:13:41.84:341,42,0	1/1:20,0:20:38.95:327,39,0	1/1:17,0:16:33.79:163,34,0
chr10	96004612	.	AAAG	A	5685.45	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=3.335;DP=345;FS=2.441;HRun=0;HaplotypeScore=152.7958;InbreedingCoeff=0.7076;MQ=54.97;MQ0=1;MQRankSum=-4.136;QD=17.55;ReadPosRankSum=3.233;VQSLOD=4.8807;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:36.01:331,36,0	1/1:3,0:3:8.94:73,9,0	0/0:14,0:9:23.79:0,24,231	0/0:7,0:5:4.80:0,5,77	1/1:20,0:20:50.39:333,50,0	1/1:7,0:7:20.66:132,21,0	1/1:8,0:8:14.82:98,15,0	1/1:7,34:40:97.79:1128,98,0	1/1:4,0:3:8.88:57,9,0	1/1:15,0:13:31.94:200,32,0	1/1:19,0:18:47.45:314,47,0	1/1:7,0:7:19.33:120,19,0	1/1:9,0:9:26.70:178,27,0	1/1:4,0:4:10.46:63,10,0	1/1:10,0:10:24.77:146,25,0	1/1:11,0:10:29.63:195,30,0	1/1:2,0:2:2.96:20,3,0	1/1:12,0:12:14.86:147,15,0	1/1:5,0:5:9.24:44,9,0	1/1:20,0:20:53.14:337,53,0	1/1:8,0:8:11.83:76,12,0	1/1:7,0:7:20.74:137,21,0	1/1:16,0:15:35.61:237,36,0	1/1:8,0:8:8.86:57,9,0	1/1:18,0:17:35.59:237,36,0	1/1:14,0:13:41.45:271,41,0	1/1:20,0:20:36.85:241,37,0	1/1:2,15:16:36.11:513,36,0
chr10	96004792	.	C	CCTGGGAATTTA	42753.11	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.416;DP=389;FS=23.724;HRun=0;HaplotypeScore=104.4567;InbreedingCoeff=0.9326;MQ=65.85;MQ0=0;MQRankSum=-7.931;QD=117.78;ReadPosRankSum=3.721;VQSLOD=3.2267;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,7:17:33.11:1752,33,0	1/1:2,3:6:12.04:593,12,0	0/0:10,0:10:29.28:0,29,707	0/0:16,0:14:38.84:0,39,945	1/1:6,10:17:45.15:2442,45,0	1/1:5,5:15:27.09:1350,27,0	1/1:5,9:18:42.14:2163,42,0	1/1:13,5:21:51.17:2323,51,0	1/1:4,5:11:27.09:1495,27,0	1/1:4,6:13:27.09:1456,27,0	1/1:2,9:14:33.11:1897,33,0	1/1:2,4:6:18.06:854,18,0	1/1:7,5:12:36.12:1957,36,0	1/1:0,4:6:12.04:690,12,0	1/1:3,10:14:33.11:1899,33,0	1/1:5,6:13:27.09:1428,27,0	1/1:5,9:17:39.13:1930,39,0	1/1:6,10:21:45.13:2382,45,0	1/1:12,7:20:57.17:2392,57,0	1/1:10,7:19:57.20:2801,57,0	1/1:9,0:9:15.02:515,15,0	1/1:3,4:8:18.06:925,18,0	1/1:4,4:9:21.07:932,21,0	1/1:6,4:15:21.07:1093,21,0	1/1:5,9:15:36.12:2005,36,0	1/1:8,13:24:60.21:3298,60,0	1/1:5,5:14:30.10:1607,30,0	1/1:1,3:4:12.04:574,12,0
chr10	96004893	.	C	CA	2986.34	PASS	AB=0.807;AC=28;AF=0.500;AN=56;BaseQRankSum=0.424;DP=499;FS=1.902;HRun=14;HaplotypeScore=63.8027;InbreedingCoeff=0.5103;MQ=47.09;MQ0=25;MQRankSum=-2.783;QD=9.25;ReadPosRankSum=-1.255;VQSLOD=2.6340;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,3:23:46.08:265,46,0	1/1:2,7:9:18.46:157,18,0	0/0:11,0:2:5.88:0,6,36	0/1:8,0:6:5.36:21,0,5	1/1:5,23:29:68.51:553,69,0	0/0:21,0:22:58.14:0,58,371	0/0:13,0:10:26.53:0,27,170	1/1:18,0:28:43.09:239,43,0	0/1:6,13:20:0.48:223,0,0	0/0:18,0:14:26.55:0,27,172	0/1:12,2:14:0.27:0,0,103	0/0:11,0:9:20.69:0,21,134	0/0:10,0:10:26.51:0,27,169	0/0:19,1:20:12.82:0,13,199	0/1:13,8:19:26.17:142,0,26	1/1:3,12:14:18.87:224,19,0	0/0:24,0:23:49.24:0,49,324	0/1:16,1:16:17.38:17,0,115	1/1:4,6:9:23.03:191,23,0	1/1:8,17:26:28.64:356,29,0	1/1:6,3:5:9:79,9,0	0/1:15,0:16:1.14:1,0,98	0/0:21,1:18:6.05:0,6,166	0/0:19,2:23:46.32:0,46,294	1/1:1,10:10:26.83:218,27,0	0/1:12,9:20:8.50:176,0,9	0/1:8,12:21:37.36:208,0,37	1/1:9,0:11:22.73:113,23,0
chr10	96005867	.	C	CT	2520.06	PASS	AB=0.718;AC=27;AF=0.482;AN=56;BaseQRankSum=-2.729;DP=401;FS=3.587;HRun=13;HaplotypeScore=48.9701;InbreedingCoeff=0.6925;MQ=69.50;MQ0=8;MQRankSum=-3.587;QD=10.63;ReadPosRankSum=-0.632;VQSLOD=2.6462;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:19:5.82:85,6,0	0/1:1,3:4:6.78:72,0,7	0/0:23,0:7:5.87:0,6,37	0/1:24,0:16:24.59:25,0,27	1/1:5,7:11:20.14:163,20,0	0/0:13,0:13:29.17:0,29,190	0/0:11,0:10:14.85:0,15,103	1/1:25,0:21:29.38:165,29,0	1/1:1,9:10:18.02:167,18,0	0/0:18,0:18:38.60:0,39,266	0/0:12,0:11:23.76:0,24,161	0/0:17,0:17:41.45:0,41,280	0/0:8,0:8:23.76:0,24,163	0/0:14,0:14:35.68:0,36,245	0/1:4,10:13:2.56:121,0,3	1/1:2,15:17:30.03:279,30,0	0/0:17,1:18:11.27:0,11,222	0/0:16,0:15:32.64:0,33,226	1/1:12,11:19:12.12:238,12,0	1/1:2,8:9:0.44:147,0,0	1/1:0,6:6:11.97:103,12,0	0/0:2,0:2:2.96:0,3,21	0/0:3,0:3:2.95:0,3,21	0/0:8,0:8:18.93:0,19,113	1/1:0,13:13:27.03:251,27,0	1/1:9,16:24:26.85:402,27,0	1/1:4,18:24:33.46:413,33,0	1/1:9,0:8:19.92:98,20,0
chr10	96005880	.	T	TTTA	1124.01	PASS	AB=0.830;AC=7;AF=0.125;AN=56;BaseQRankSum=-2.945;DP=387;FS=8.706;HRun=0;HaplotypeScore=59.7730;InbreedingCoeff=0.5269;MQ=56.63;MQ0=21;MQRankSum=-3.952;QD=11.96;ReadPosRankSum=-3.969;VQSLOD=1.0584;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:3,0:17:1.24:90,0,1	0/0:5,0:5:13.61:0,14,69	0/0:10,0:2:4.99:0,5,24	0/1:16,0:9:14.60:15,0,87	0/0:10,0:9:18.38:0,18,77	0/0:13,0:13:35.99:0,36,447	0/0:7,0:6:17.99:0,18,240	1/1:3,18:23:68.89:745,69,0	0/0:11,0:10:18.44:0,18,79	0/0:19,0:19:50.99:0,51,652	0/0:11,0:10:23.81:0,24,331	0/0:17,0:17:50.82:0,51,638	0/0:9,0:9:27.06:0,27,375	0/0:15,0:15:42.01:0,42,563	0/0:14,0:13:21.93:0,22,134	0/0:18,0:18:20.15:0,20,118	0/0:18,0:16:44.73:0,45,605	0/0:18,0:13:39.05:0,39,531	0/1:20,0:16:1.84:2,0,152	0/0:10,0:9:24.42:0,24,143	0/0:8,0:7:9:0,9,42	0/0:1,0:1:3.01:0,3,44	0/0:1,0:1:3.01:0,3,44	0/0:9,0:8:21.05:0,21,260	0/0:15,0:15:29.25:0,29,124	0/0:25,0:24:26.26:0,26,241	0/0:29,0:27:39.65:0,40,225	1/1:2,6:8:21.07:407,21,0
chr10	96008420	.	G	GGTTT	1659.66	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-6.320;DP=606;FS=9.365;HRun=0;HaplotypeScore=94.8241;InbreedingCoeff=0.8226;MQ=67.24;MQ0=0;MQRankSum=-2.595;QD=25.93;ReadPosRankSum=-4.690;VQSLOD=1.3212;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.27:0,90,1430	0/0:12,0:12:33.10:0,33,517	0/1:19,0:17:4.73:5,0,475	0/0:14,0:13:27.97:0,28,342	0/0:35,0:35:90.29:0,90,1465	0/0:19,0:19:42.14:0,42,690	0/0:20,0:20:45.13:0,45,724	1/1:18,17:36:66.18:1331,66,0	0/0:14,0:14:39.13:0,39,650	0/0:32,0:32:87.20:0,87,1332	0/0:27,0:27:66.22:0,66,1081	0/0:14,0:14:36.11:0,36,579	0/0:14,0:14:39.12:0,39,631	0/0:23,0:23:51.17:0,51,856	0/0:21,0:21:57.19:0,57,957	0/0:27,0:27:69.22:0,69,1133	0/0:35,0:34:84.25:0,84,1342	0/0:14,0:14:30.10:0,30,504	0/0:26,0:26:51.12:0,51,783	0/0:28,0:28:75.26:0,75,1256	0/0:17,0:17:39.13:0,39,655	0/0:16,0:16:42.14:0,42,701	0/0:16,0:16:42.12:0,42,655	0/0:16,0:16:39.13:0,39,655	0/0:13,0:13:27.09:0,27,453	0/0:35,0:35:90.29:0,90,1459	0/0:22,0:22:63.18:0,63,996	1/1:2,7:9:18.06:447,18,0
chr10	96008835	.	T	TTCTCTC	20672.69	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.463;DP=534;FS=10.083;HRun=0;HaplotypeScore=119.9799;InbreedingCoeff=0.7200;MQ=58.31;MQ0=7;MQRankSum=-4.639;QD=43.34;ReadPosRankSum=3.176;VQSLOD=3.9920;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:20:20.54:545,21,0	1/1:3,9:13:24.08:796,24,0	0/0:31,0:19:20.96:0,21,375	0/0:25,0:21:23.80:0,24,389	1/1:10,18:27:45.15:1353,45,0	1/1:17,0:17:36.12:1031,36,0	1/1:8,0:8:12.04:353,12,0	1/1:38,0:33:30.03:584,30,0	1/1:2,15:18:45.15:1490,45,0	1/1:28,1:28:54.18:1468,54,0	1/1:26,0:26:38.87:1047,39,0	1/1:14,0:14:36.12:1030,36,0	1/1:15,1:16:21.07:625,21,0	1/1:12,0:12:24.08:696,24,0	1/1:6,16:21:45.15:1462,45,0	1/1:6,7:12:18.06:565,18,0	1/1:11,0:11:18.06:521,18,0	1/1:10,0:9:3.01:82,3,0	1/1:11,10:23:36.12:1062,36,0	1/1:10,6:16:27.09:827,27,0	1/1:11,8:19:3.01:99,3,0	1/1:10,0:10:9.03:258,9,0	1/1:10,0:10:5.75:171,6,0	1/1:7,0:6:6.02:136,6,0	1/1:3,15:20:39.13:1281,39,0	1/1:15,17:31:57.16:1637,57,0	1/1:7,12:21:42.14:1222,42,0	1/1:11,0:19:14.92:331,15,0
chr10	96008851	.	C	CTCTCTCT	20836.04	PASS	AB=0.985;AC=39;AF=0.696;AN=56;BaseQRankSum=1.005;DP=514;FS=8.997;HRun=0;HaplotypeScore=111.9567;InbreedingCoeff=-0.1290;MQ=45.99;MQ0=20;MQRankSum=-6.985;QD=44.24;ReadPosRankSum=7.082;VQSLOD=3.2099;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,2:22:24.08:794,24,0	0/1:15,0:14:47.68:510,0,48	0/0:23,0:13:24.12:0,24,450	0/0:19,0:14:26.39:0,26,458	0/1:24,0:23:46.56:1036,0,47	1/1:1,15:18:39.13:1463,39,0	1/1:3,4:9:15.01:471,15,0	0/1:36,0:25:99:557,0,216	0/1:20,0:20:29.65:927,0,30	1/1:10,18:29:69.70:2113,70,0	1/1:3,23:28:51.06:1633,51,0	1/1:1,13:14:39.09:1448,39,0	1/1:5,8:15:24.08:902,24,0	1/1:2,11:14:27.09:999,27,0	0/1:23,0:22:23.64:1040,0,24	0/1:12,0:11:27.80:380,0,28	1/1:4,8:12:15.22:682,15,0	1/1:7,0:8:3.59:346,4,0	0/1:19,0:18:80.31:705,0,80	0/1:13,1:16:12.75:754,0,13	0/1:11,0:11:16.91:118,0,17	1/1:3,5:10:18.06:530,18,0	1/1:3,6:10:8.76:288,9,0	1/1:3,0:5:6.02:136,6,0	0/1:25,0:25:81.28:786,0,81	0/1:25,1:25:63.47:1124,0,63	0/1:21,0:21:96.23:756,0,96	0/1:13,0:13:99:337,0,99
chr10	96009701	.	G	GC	3550.06	PASS	AB=0.775;AC=45;AF=0.804;AN=56;BaseQRankSum=-1.630;DP=388;FS=0.645;HRun=9;HaplotypeScore=60.5519;InbreedingCoeff=0.5495;MQ=70.84;MQ0=11;MQRankSum=-2.264;QD=12.08;ReadPosRankSum=0.255;VQSLOD=2.8732;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:25:51.39:222,51,0	1/1:1,2:3:9.02:99,9,0	0/0:31,0:18:14.81:0,15,275	0/0:42,0:22:39.39:0,39,293	1/1:0,5:6:7.59:126,8,0	1/1:3,6:11:11.77:96,12,0	1/1:13,0:16:16.07:124,16,0	0/0:13,0:13:23.99:0,24,208	1/1:7,12:20:38.94:411,39,0	1/1:4,1:5:5.84:42,6,0	1/1:7,0:6:5.72:30,6,0	1/1:9,1:15:26.33:187,26,0	1/1:9,0:13:14.20:72,14,0	1/1:7,0:8:14.77:96,15,0	0/1:8,13:21:12.46:326,0,12	1/1:5,13:18:33.05:352,33,0	1/1:7,0:12:5.79:32,6,0	1/1:3,0:14:20.84:102,21,0	1/1:4,9:13:0.97:226,1,0	0/1:7,5:12:50.99:165,0,51	1/1:8,12:20:12.02:133,12,0	1/1:5,0:6:5.82:36,6,0	1/1:2,1:4:3.01:34,3,0	0/1:10,0:10:0:0,0,0	1/1:2,4:7:11.87:114,12,0	1/1:2,9:11:27.07:294,27,0	1/1:2,8:10:21.48:233,21,0	0/0:8,0:8:17.98:0,18,156
chr10	96009705	.	C	CCA	1243.64	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=-0.524;DP=404;FS=19.843;HRun=0;HaplotypeScore=75.4956;InbreedingCoeff=0.0247;MQ=62.78;MQ0=22;MQRankSum=-1.291;QD=8.58;ReadPosRankSum=0.754;VQSLOD=1.7201;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,21:23:63.10:1015,63,0	0/0:5,0:4:4.79:0,5,17	0/0:34,0:15:37.53:0,38,568	0/0:50,0:20:54.05:0,54,687	0/0:8,0:8:12.17:0,12,54	0/1:12,0:12:14.65:29,0,15	0/1:20,0:20:21.86:22,0,49	0/0:14,0:14:36.48:0,36,454	0/0:18,0:18:25.62:0,26,178	0/1:8,0:6:9.66:10,0,27	1/1:5,0:4:5.97:47,6,0	0/1:13,0:13:14.99:83,0,15	0/1:11,0:11:42.86:62,0,43	0/1:7,0:7:25.28:60,0,25	0/0:19,0:19:36.25:0,36,202	0/0:19,0:19:39.38:0,39,192	0/1:14,0:12:3.68:4,0,50	0/1:13,0:13:37.56:43,0,38	0/0:12,0:12:23.79:0,24,127	0/0:15,0:15:26.17:0,26,222	0/0:21,0:21:12.86:0,13,61	0/1:7,0:7:20.41:20,0,67	0/0:4,0:4:8.49:0,8,59	0/0:9,0:9:6:0,6,52	0/1:8,0:8:5.77:6,0,35	0/0:11,0:11:15.33:0,15,89	0/0:12,0:12:17.30:0,17,60	0/0:8,0:8:24.05:0,24,320
chr10	96009713	.	T	TTGTG	5654.83	PASS	AC=48;AF=0.960;AN=50;BaseQRankSum=-4.306;DP=503;FS=13.454;HRun=0;HaplotypeScore=166.9353;InbreedingCoeff=0.3631;MQ=49.84;MQ0=27;MQRankSum=1.233;QD=14.54;ReadPosRankSum=-2.817;VQSLOD=3.1991;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:23:20.39:0,20,175	1/1:4,1:5:3.01:71,3,0	./.	./.	./.	1/1:8,1:10:9.01:149,9,0	1/1:18,1:23:11.95:246,12,0	1/1:18,0:17:8.98:110,9,0	1/1:26,2:29:23.93:449,24,0	1/1:10,5:13:24.06:388,24,0	1/1:6,3:8:5.89:139,6,0	1/1:12,1:15:18.06:327,18,0	1/1:15,0:17:18.06:377,18,0	1/1:9,2:11:15.03:291,15,0	1/1:26,0:26:8.90:144,9,0	1/1:19,1:24:33.11:635,33,0	1/1:17,0:15:20.74:311,21,0	1/1:13,0:13:6.02:119,6,0	1/1:15,0:15:11.94:160,12,0	1/1:22,0:22:14.94:281,15,0	1/1:24,0:24:17.91:360,18,0	1/1:7,1:8:3.01:71,3,0	1/1:9,1:8:6.02:135,6,0	1/1:15,1:16:3.01:71,3,0	1/1:14,0:14:11.93:208,12,0	1/1:22,1:23:24.59:411,25,0	1/1:13,0:14:9.03:150,9,0	1/1:6,0:7:3.01:52,3,0
chr10	96010659	.	C	CTG	318.50	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.571;DP=580;FS=43.034;HRun=0;HaplotypeScore=124.7222;InbreedingCoeff=0.9345;MQ=55.53;MQ0=23;MQRankSum=-4.254;QD=10.62;ReadPosRankSum=-3.075;VQSLOD=0.8831;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:37:54.50:0,54,369	0/0:6,0:6:8.80:0,9,111	0/0:17,0:8:18.03:0,18,231	0/0:41,0:15:29.70:0,30,322	0/0:29,0:28:50.91:0,51,706	0/0:18,0:18:18.06:0,18,261	0/0:20,0:20:39.11:0,39,549	1/1:13,0:12:28.19:285,28,0	0/0:11,0:11:15.05:0,15,212	0/0:20,0:20:59.98:0,60,789	0/0:22,0:19:32.92:0,33,477	0/0:16,0:16:33:0,33,453	0/0:15,0:15:35.85:0,36,500	0/0:9,0:9:21.05:0,21,284	0/0:28,0:26:54.18:0,54,785	0/0:16,0:16:44.98:0,45,555	0/0:21,0:22:39.05:0,39,750	0/0:24,0:23:57.19:0,57,816	0/0:26,0:21:62.96:0,63,842	0/0:20,0:20:48.16:0,48,711	0/0:21,0:20:33.04:0,33,475	0/0:22,0:22:32.58:0,33,487	0/0:13,0:13:36.12:0,36,524	0/0:21,0:21:36.12:0,36,509	0/0:16,0:16:36.11:0,36,509	0/0:31,0:30:69.36:0,69,1003	0/0:26,0:26:54.15:0,54,716	1/1:5,12:16:12.01:150,12,0
chr10	96010661	.	CTGTG	C	8522.80	PASS	AB=0.636;AC=46;AF=0.821;AN=56;BaseQRankSum=-3.581;DP=576;FS=33.679;HRun=0;HaplotypeScore=108.2368;InbreedingCoeff=0.5953;MQ=54.80;MQ0=22;MQRankSum=4.952;QD=17.15;ReadPosRankSum=4.854;VQSLOD=2.4950;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,4:37:6.42:390,6,0	1/1:5,0:6:5.82:92,6,0	0/0:16,0:8:3.01:0,3,51	0/0:35,0:11:12.04:0,12,213	1/1:14,13:26:17.60:291,18,0	0/1:8,9:18:0.54:134,0,1	1/1:6,15:21:27.09:438,27,0	0/0:14,0:13:25.80:0,26,399	1/1:3,8:11:6.02:97,6,0	1/1:19,0:21:36.03:425,36,0	1/1:8,14:19:17.65:291,18,0	1/1:8,8:17:17.42:251,17,0	1/1:3,10:15:26.82:417,27,0	1/1:7,1:9:6.02:94,6,0	1/1:8,18:26:38.92:632,39,0	1/1:5,9:16:30.09:451,30,0	0/1:9,12:22:4.82:453,0,5	1/1:9,16:24:2.47:592,2,0	1/1:18,9:22:24.08:373,24,0	1/1:9,9:20:27.09:423,27,0	1/1:7,14:23:13.96:376,14,0	1/1:6,15:22:10.64:307,11,0	1/1:6,6:13:18.06:292,18,0	1/1:3,18:21:27.09:438,27,0	1/1:8,8:16:12.04:195,12,0	1/1:13,16:29:33.07:461,33,0	1/1:6,20:27:39.07:611,39,0	0/0:13,0:12:4.83:0,5,47
chr10	96011429	.	A	AG	1518.05	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.724;DP=724;FS=4.865;HRun=4;HaplotypeScore=67.9385;InbreedingCoeff=0.9988;MQ=83.17;MQ0=0;MQRankSum=-0.720;QD=29.77;ReadPosRankSum=-4.257;VQSLOD=1.6448;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,120,1350	0/0:17,0:17:45.13:0,45,510	0/0:18,0:17:36.10:0,36,408	0/0:26,0:26:66.15:0,66,731	0/0:25,0:25:69.20:0,69,782	0/0:25,0:25:66.17:0,66,739	0/0:28,0:28:75.21:0,75,851	1/1:4,32:36:96.32:1311,96,0	0/0:18,0:18:51.13:0,51,569	0/0:20,0:20:54.15:0,54,612	0/0:22,0:22:57.15:0,57,635	0/0:24,0:24:69.15:0,69,760	0/0:22,0:22:60.17:0,60,681	0/0:25,0:25:66.19:0,66,746	0/0:34,0:34:96.26:0,96,1080	0/0:21,0:21:54.15:0,54,613	0/0:36,0:36:96.23:0,96,1075	0/0:18,0:18:51.14:0,51,578	0/0:28,0:28:81.19:0,81,898	0/0:20,0:20:48.12:0,48,534	0/0:53,0:53:99:0,141,1599	0/0:34,0:33:96.24:0,96,1068	0/0:16,0:16:45.13:0,45,510	0/0:23,0:23:57.16:0,57,647	0/0:20,0:20:48.12:0,48,535	0/0:34,0:33:84.22:0,84,944	0/0:18,0:16:42.10:0,42,465	1/1:1,14:15:24.08:328,24,0
chr10	96011693	.	CA	C	2625.53	PASS	AC=26;AF=0.481;AN=54;BaseQRankSum=-8.833;DP=453;FS=1.469;HRun=12;HaplotypeScore=89.4957;InbreedingCoeff=0.9361;MQ=46.89;MQ0=29;MQRankSum=1.516;QD=12.75;ReadPosRankSum=2.240;VQSLOD=3.9349;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:7:7.70:0,8,42	0/0:9,0:9:23.41:0,23,163	0/0:24,0:5:7.23:0,7,34	0/0:28,0:7:14.72:0,15,113	0/0:14,0:14:37.45:0,37,224	1/1:6,7:12:17.89:135,18,0	1/1:7,11:17:28.27:210,28,0	1/1:2,0:1:2.04:6,2,0	0/0:16,0:15:31.69:0,32,184	1/1:9,14:21:35.77:277,36,0	1/1:5,15:18:32.30:240,32,0	1/1:3,7:10:11.58:150,12,0	1/1:7,10:17:32.57:249,33,0	1/1:2,4:5:14.94:115,15,0	0/0:12,0:11:28.61:0,29,160	0/0:14,0:12:29.19:0,29,206	1/1:9,19:28:44.02:452,44,0	1/1:4,9:12:15.98:168,16,0	0/0:26,0:23:47.52:0,48,286	0/0:15,0:14:31.77:0,32,192	0/0:14,0:12:24.18:0,24,136	1/1:6,18:23:56.63:430,57,0	1/1:9,10:18:38.81:296,39,0	1/1:5,7:11:14.94:115,15,0	0/0:16,0:16:22.36:0,22,147	0/0:22,0:20:27.99:0,28,148	0/0:25,0:22:29.62:0,30,177	./.
chr10	96011716	.	AAC	A	422.43	PASS	AB=0.827;AC=5;AF=0.089;AN=56;BaseQRankSum=2.470;DP=487;FS=34.866;HRun=0;HaplotypeScore=107.2603;InbreedingCoeff=0.3111;MQ=60.45;MQ0=17;MQRankSum=-3.149;QD=5.95;ReadPosRankSum=-2.630;VQSLOD=1.0939;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:8:7.82:0,8,43	0/0:15,0:15:42.03:0,42,637	0/1:34,0:17:13.29:13,0,348	0/0:41,0:12:4.26:0,4,228	0/0:19,0:19:57.16:0,57,990	0/0:11,0:10:18.49:0,18,445	0/0:18,0:18:48.01:0,48,794	0/1:1,10:11:9.87:420,0,10	0/0:15,0:14:39.13:0,39,726	0/0:20,0:19:57.19:0,57,973	0/0:19,0:17:48.16:0,48,849	0/0:12,0:12:33.11:0,33,578	0/0:11,0:11:32.45:0,32,518	0/0:7,0:6:18.06:0,18,314	0/0:14,0:13:36.12:0,36,648	0/0:12,0:10:24.08:0,24,416	0/0:32,0:32:81.36:0,81,1384	0/0:13,0:13:33.11:0,33,542	0/0:27,0:25:66.16:0,66,1075	0/0:18,0:18:54.18:0,54,946	0/1:21,1:21:0.16:0,0,747	0/0:27,0:26:78.26:0,78,1347	0/0:16,0:16:45.15:0,45,808	0/0:10,0:10:18.06:0,18,311	0/0:12,0:12:33.11:0,33,622	0/0:16,0:15:45.15:0,45,789	0/0:20,0:20:52.61:0,53,860	1/1:1,3:3:6.02:92,6,0
chr10	96012423	.	G	GGT	1560.81	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.280;DP=755;FS=0.000;HRun=0;HaplotypeScore=85.9079;InbreedingCoeff=0.9837;MQ=79.53;MQ0=0;MQRankSum=-0.878;QD=42.18;ReadPosRankSum=-4.131;VQSLOD=3.9600;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,138,1961	0/0:11,0:11:33.11:0,33,486	0/0:26,0:26:78.23:0,78,1069	0/0:13,0:13:36.09:0,36,472	0/0:23,0:23:63.16:0,63,884	0/0:15,0:15:45.13:0,45,641	0/0:28,0:28:81.25:0,81,1170	1/1:4,28:33:81.25:1453,81,0	0/0:32,0:32:93.30:0,93,1339	0/0:18,0:18:51.17:0,51,750	0/0:25,0:25:63.13:0,63,846	0/0:40,0:40:99:0,117,1684	0/0:33,0:33:99:0,99,1458	0/0:24,0:24:66.21:0,66,951	0/0:27,0:27:81.27:0,81,1188	0/0:29,0:29:87.27:0,87,1246	0/0:29,0:29:87.29:0,87,1280	0/0:24,0:24:63.19:0,63,907	0/0:21,0:21:54.18:0,54,794	0/0:27,0:27:66.17:0,66,927	0/0:50,0:50:99:0,138,1991	0/0:22,0:22:60.19:0,60,864	0/0:28,0:28:75.25:0,75,1099	0/0:29,0:29:75.25:0,75,1104	0/0:19,0:19:54.18:0,54,795	0/0:33,0:33:96.32:0,96,1412	0/0:41,0:41:99:0,117,1721	1/1:0,4:4:12.04:225,12,0
chr10	96014270	.	TTG	T	1170.88	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=0.942;DP=500;FS=12.137;HRun=0;HaplotypeScore=73.7797;InbreedingCoeff=0.4271;MQ=81.42;MQ0=4;MQRankSum=-1.976;QD=9.60;ReadPosRankSum=-5.089;VQSLOD=0.7648;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:25.19:0,25,182	0/0:8,0:8:17.84:0,18,228	0/0:30,0:23:31.25:0,31,349	0/1:17,0:11:7.66:8,0,156	0/0:29,0:29:76.85:0,77,753	0/0:21,0:21:40.38:0,40,471	0/0:11,0:11:14.95:0,15,215	1/1:33,6:39:97.49:957,97,0	0/0:9,0:9:27.06:0,27,347	0/1:25,0:25:11.56:12,0,482	0/0:16,0:16:29.64:0,30,476	0/0:17,0:17:21.55:0,22,420	0/0:10,0:10:20.78:0,21,208	0/0:19,0:19:29.94:0,30,307	0/0:21,0:21:37.87:0,38,521	0/0:23,0:23:59.88:0,60,739	0/0:21,0:21:35.57:0,36,340	0/1:15,0:15:36.59:37,0,244	0/0:15,0:15:31.06:0,31,414	0/0:18,0:18:46.37:0,46,545	0/0:8,0:8:20.35:0,20,228	0/1:5,0:5:4.87:5,0,92	0/0:13,0:13:14.25:0,14,287	0/0:8,0:8:14.90:0,15,142	0/0:18,0:18:35.89:0,36,428	0/0:29,0:29:76.67:0,77,870	0/0:19,0:19:56.70:0,57,694	1/1:19,2:20:10.74:291,11,0
chr10	96014271	.	TG	T	1491.09	PASS	AB=0.976;AC=8;AF=0.143;AN=56;BaseQRankSum=0.784;DP=514;FS=17.905;HRun=1;HaplotypeScore=68.7072;InbreedingCoeff=0.3995;MQ=80.23;MQ0=4;MQRankSum=-3.122;QD=12.32;ReadPosRankSum=-5.010;VQSLOD=-0.1992;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:11.53:0,12,122	0/0:8,0:8:14.81:0,15,155	0/0:29,1:22:31.73:0,32,347	0/1:16,1:11:2.37:2,0,138	0/0:28,1:29:53.04:0,53,575	0/0:23,0:23:38.72:0,39,337	0/0:12,0:12:14.48:0,14,138	1/1:30,8:38:99:1068,113,0	0/0:11,0:11:26.73:0,27,268	0/1:24,1:25:19.17:19,0,344	0/0:17,0:17:28.94:0,29,333	0/0:17,1:18:9.92:0,10,273	0/0:11,0:11:14.63:0,15,125	0/0:19,0:19:29.64:0,30,223	0/0:19,2:21:5.51:0,6,372	0/0:22,0:22:53.94:0,54,521	0/0:23,0:23:34.34:0,34,243	0/1:15,0:15:51.04:51,0,179	0/0:16,1:17:12.33:0,12,323	0/0:20,0:20:41.87:0,42,412	0/0:8,0:8:19.71:0,20,193	0/1:5,0:5:14.38:14,0,52	0/0:13,1:14:14.20:0,14,227	0/0:9,0:9:14.60:0,15,97	0/0:16,0:16:34.04:0,34,316	0/0:29,0:29:75.30:0,75,709	0/0:21,0:21:49.65:0,50,530	1/1:14,7:20:50.49:479,50,0
chr10	96014632	.	GTAGACACCGTTACCCACTGAGC	G	1273.96	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.053;DP=673;FS=0.000;HRun=0;HaplotypeScore=369.3717;InbreedingCoeff=0.9681;MQ=69.44;MQ0=0;MQRankSum=-3.179;QD=55.39;ReadPosRankSum=-3.064;VQSLOD=1.0005;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,12371	0/0:9,0:9:24.08:0,24,2448	0/0:19,0:19:57.10:0,57,3603	0/0:20,0:20:57.20:0,57,3773	0/0:29,0:29:87.04:0,87,7653	0/0:20,0:20:60.21:0,60,5679	0/0:29,0:29:87.28:0,87,7650	1/1:0,20:20:59.68:823,60,0	0/0:19,0:19:57.18:0,57,5370	0/0:26,0:26:78.26:0,78,6496	0/0:13,0:13:39.13:0,39,3806	0/0:32,0:32:96.33:0,96,8915	0/0:18,0:18:54.19:0,54,5137	0/0:19,0:19:57.20:0,57,5732	0/0:32,0:32:96.33:0,96,9899	0/0:33,0:33:99:0,99,9980	0/0:28,0:28:84.26:0,84,7845	0/0:22,0:22:66.23:0,66,6270	0/0:23,0:23:69.24:0,69,5496	0/0:16,0:16:48.16:0,48,4446	0/0:59,0:59:99:0,175,15621	0/0:23,0:23:66.23:0,66,6013	0/0:18,0:18:54.19:0,54,5611	0/0:33,0:33:93.30:0,93,8836	0/0:12,0:12:36.12:0,36,3504	0/0:30,0:30:87.28:0,87,7462	0/0:23,0:23:69.24:0,69,6409	1/1:0,3:3:9.03:565,9,0
chr10	96015495	.	A	ATTTGTTT	15792.03	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.850;DP=474;FS=24.719;HRun=0;HaplotypeScore=110.8821;InbreedingCoeff=0.7594;MQ=55.20;MQ0=4;MQRankSum=-3.414;QD=34.63;ReadPosRankSum=0.411;VQSLOD=2.8876;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:26:51.14:1286,51,0	1/1:0,0:2:6.02:198,6,0	0/0:10,0:7:13.74:0,14,152	0/0:8,0:8:7.96:0,8,91	1/1:3,0:13:15:223,15,0	1/1:4,0:16:12.04:396,12,0	1/1:7,2:14:23.78:504,24,0	1/1:8,26:37:99:1928,105,0	1/1:5,0:15:21:542,21,0	1/1:6,2:28:69.03:1043,69,0	1/1:3,0:19:21.07:554,21,0	1/1:4,1:18:15.05:385,15,0	1/1:5,0:12:8.50:159,9,0	1/1:10,0:9:14.97:152,15,0	1/1:6,0:16:15.05:354,15,0	1/1:5,0:18:30.07:735,30,0	1/1:6,0:29:33.04:948,33,0	1/1:0,1:15:9.03:314,9,0	1/1:24,0:24:60.59:884,61,0	1/1:1,0:11:20.99:549,21,0	1/1:2,0:9:12.02:261,12,0	1/1:5,2:14:17.86:366,18,0	1/1:4,0:14:26.92:592,27,0	1/1:1,0:8:12.04:396,12,0	1/1:2,0:17:21.07:692,21,0	1/1:9,0:29:76.12:1422,76,0	1/1:8,0:20:24.08:568,24,0	1/1:8,5:13:11.99:339,12,0
chr10	96015497	.	T	TTG	4510.04	PASS	AB=0.948;AC=46;AF=0.821;AN=56;BaseQRankSum=-1.766;DP=430;FS=10.290;HRun=0;HaplotypeScore=124.4709;InbreedingCoeff=0.2441;MQ=54.39;MQ0=4;MQRankSum=-1.234;QD=10.95;ReadPosRankSum=5.262;VQSLOD=4.0087;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:27:13.78:259,14,0	1/1:2,0:2:6:55,6,0	0/0:10,0:7:14.48:0,14,146	0/0:8,0:8:11.50:0,11,140	1/1:11,0:11:11.78:81,12,0	1/1:14,0:14:12.01:109,12,0	1/1:12,0:12:6.76:146,7,0	1/1:35,0:33:25.13:448,25,0	1/1:12,0:12:20.74:166,21,0	1/1:22,0:22:19.20:373,19,0	0/1:19,0:19:3.22:109,0,3	1/1:16,0:15:11.73:100,12,0	1/1:11,0:11:2.74:27,3,0	0/1:6,5:10:1.82:90,0,2	0/1:14,0:14:19.20:45,0,19	1/1:18,0:18:18.06:164,18,0	1/1:25,0:25:22.18:249,22,0	1/1:13,0:13:9:82,9,0	1/1:7,16:23:22.28:545,22,0	1/1:11,0:10:17.93:154,18,0	1/1:7,0:7:8.94:74,9,0	0/1:12,0:11:8.69:87,0,9	1/1:14,0:14:23.07:180,23,0	1/1:8,0:8:12.01:111,12,0	0/1:18,0:15:1.44:166,0,1	1/1:28,0:28:20.89:527,21,0	1/1:21,0:20:10.62:111,11,0	0/1:8,0:8:25.33:52,0,25
chr10	96015498	.	T	TG	1647.20	PASS	AB=0.987;AC=31;AF=0.554;AN=56;BaseQRankSum=9.268;DP=422;FS=3.025;HRun=0;HaplotypeScore=88.3637;InbreedingCoeff=-0.3969;MQ=54.07;MQ0=4;MQRankSum=-1.478;QD=4.08;ReadPosRankSum=7.240;VQSLOD=2.8911;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:55.58:56,0,124	1/1:2,0:2:5.60:25,6,0	0/0:10,0:7:14.93:0,15,141	0/0:8,0:8:12.48:0,12,132	0/1:10,1:11:5.20:78,0,5	1/1:14,0:14:11.23:52,11,0	0/1:12,0:12:7.21:7,0,79	0/1:35,0:33:29.91:317,0,30	0/1:10,1:11:0.56:76,0,1	0/1:19,0:19:79.49:114,0,79	0/1:18,0:18:14.95:48,0,15	0/1:16,0:15:5.82:37,0,6	0/1:11,0:11:3.99:4,0,31	0/1:10,0:9:23.44:23,0,46	0/1:14,0:14:4.46:4,0,86	0/1:18,0:18:44.19:44,0,73	0/1:25,0:25:47:61,0,47	1/1:12,0:12:8.39:38,8,0	0/1:20,2:23:27.11:295,0,27	1/1:11,0:10:16.91:81,17,0	0/1:7,0:7:8.49:29,0,8	0/1:11,0:10:9.54:43,0,10	0/1:13,0:13:31.73:46,0,32	1/1:8,0:8:11.23:52,11,0	0/1:18,0:15:5.32:65,0,5	0/1:29,0:29:99:187,0,116	0/1:22,0:21:15.23:15,0,78	0/1:8,0:8:8.18:8,0,63
chr10	96017044	.	T	TG	8153.28	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-14.819;DP=724;FS=3.985;HRun=7;HaplotypeScore=67.4139;InbreedingCoeff=0.9993;MQ=83.70;MQ0=0;MQRankSum=-6.731;QD=29.76;ReadPosRankSum=2.606;VQSLOD=5.4677;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,144,1374	1/1:1,12:13:36.11:435,36,0	0/0:15,0:15:37.82:0,38,335	0/0:32,0:32:55.15:0,55,614	1/1:2,27:29:72.22:869,72,0	0/0:23,0:23:63.08:0,63,601	0/0:43,0:43:99:0,114,1101	0/0:23,0:23:51.06:0,51,488	1/1:1,17:18:45.14:544,45,0	0/0:21,0:21:51.07:0,51,488	0/0:16,0:16:42:0,42,390	0/0:31,0:31:75.10:0,75,719	0/0:16,0:16:48.08:0,48,463	0/0:22,0:22:54.03:0,54,512	1/1:3,24:27:75.23:902,75,0	1/1:1,32:33:93.29:1124,93,0	0/0:44,0:44:99:0,120,1159	0/0:29,0:29:81.12:0,81,782	1/1:4,13:17:36.11:435,36,0	1/1:2,19:21:45.11:529,45,0	1/1:4,48:51:99:1470,123,0	0/0:24,0:24:59.96:0,60,565	0/0:13,0:13:33.04:0,33,315	0/0:36,0:36:99:0,99,956	1/1:3,16:19:48.15:580,48,0	1/1:3,20:23:57.12:650,57,0	1/1:1,21:22:51.16:616,51,0	0/0:7,0:7:21.03:0,21,203
chr10	96017547	.	GC	G	2818.08	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=6.280;DP=310;FS=9.322;HRun=5;HaplotypeScore=39.2329;InbreedingCoeff=0.8598;MQ=86.53;MQ0=0;MQRankSum=-1.636;QD=24.94;ReadPosRankSum=0.399;VQSLOD=1.7560;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:42.05:0,42,543	1/1:0,1:1:3.01:34,3,0	0/0:14,0:14:20.28:0,20,277	0/0:20,0:17:27.55:0,28,313	1/1:0,4:4:9.03:102,9,0	0/0:8,0:8:24.08:0,24,328	0/0:15,0:15:38.34:0,38,497	0/0:7,0:7:21.06:0,21,273	1/1:0,8:8:18.05:203,18,0	0/0:12,0:12:30.08:0,30,408	0/0:5,0:5:12.04:0,12,162	0/0:15,0:15:42.14:0,42,570	0/0:8,0:8:24.07:0,24,308	0/0:11,0:11:33.07:0,33,415	1/1:2,4:6:12.03:136,12,0	1/1:0,2:2:6.02:68,6,0	0/0:17,0:17:51.17:0,51,694	0/0:17,0:17:51.16:0,51,679	1/1:5,14:19:42.03:441,42,0	1/1:0,1:1:3.01:34,3,0	1/1:1,48:49:99:1394,123,0	0/0:7,0:7:18.06:0,18,245	0/0:2,0:2:0:0,0,0	0/0:22,0:22:63.20:0,63,844	1/1:0,3:3:6.02:68,6,0	1/1:2,14:16:36.10:406,36,0	1/1:0,4:4:12.03:136,12,0	0/0:3,0:3:9.03:0,9,123
chr10	96018263	.	C	CTTT	4193.62	PASS	AB=0.645;AC=47;AF=0.839;AN=56;BaseQRankSum=0.301;DP=473;FS=2.172;HRun=11;HaplotypeScore=81.4507;InbreedingCoeff=0.2120;MQ=65.27;MQ0=9;MQRankSum=1.670;QD=9.49;ReadPosRankSum=3.352;VQSLOD=-0.2503;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:31:38.86:299,39,0	1/1:2,0:3:5.86:38,6,0	0/1:47,0:20:5.45:5,0,183	0/0:31,0:11:5.06:0,5,76	1/1:4,1:11:9.40:196,9,0	1/1:1,0:13:11.21:24,11,0	1/1:3,0:12:9.97:22,10,0	1/1:7,15:23:49.70:683,50,0	1/1:1,0:8:20.83:154,21,0	1/1:2,0:17:37.42:279,37,0	1/1:0,0:8:17.94:140,18,0	1/1:0,0:8:12.02:54,12,0	0/1:5,0:13:2.82:3,0,27	0/1:3,0:9:5.95:6,0,7	1/1:1,0:12:20.77:160,21,0	1/1:4,1:15:41.20:340,41,0	0/1:11,0:50:39.43:39,0,47	0/1:5,0:30:36.87:61,0,37	1/1:7,0:21:39.94:319,40,0	1/1:1,0:11:26.90:207,27,0	1/1:3,0:14:23.90:181,24,0	1/1:4,0:5:10.21:75,10,0	0/1:3,0:8:3.20:3,0,27	0/1:4,0:16:8.28:15,0,8	1/1:4,0:10:11.95:92,12,0	1/1:4,1:22:46.42:406,46,0	1/1:1,0:14:35.78:268,36,0	1/1:6,2:10:10.56:125,11,0
chr10	96020170	.	TA	T	1466.76	PASS	AB=0.750;AC=28;AF=0.500;AN=56;BaseQRankSum=6.897;DP=547;FS=1.959;HRun=17;HaplotypeScore=66.9787;InbreedingCoeff=0.2433;MQ=71.23;MQ0=0;MQRankSum=1.115;QD=3.79;ReadPosRankSum=2.230;VQSLOD=0.3149;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,11:19:21.12:111,21,0	0/1:2,5:8:7.21:56,0,7	0/1:33,1:18:10.23:10,0,66	0/0:11,0:6:3.85:0,4,22	1/1:9,17:29:8.71:181,9,0	0/1:23,7:31:48.58:49,0,198	0/0:14,3:17:19.12:0,19,239	1/1:7,1:25:38.31:121,38,0	1/1:6,7:14:21.45:120,21,0	0/0:21,1:26:21.65:0,22,232	0/1:21,4:26:17.02:17,0,148	0/0:23,1:25:18.12:0,18,236	0/1:8,2:10:1.90:2,0,69	0/0:9,0:10:17.68:0,18,117	1/1:8,12:22:9.21:138,9,0	1/1:8,19:32:33.88:266,34,0	0/0:14,2:18:3.25:0,3,130	0/0:20,1:22:19.60:0,20,243	0/1:8,8:17:35.64:104,0,36	0/1:13,8:23:21.29:74,0,21	0/1:3,7:10:12.72:50,0,13	0/1:19,3:24:2.57:3,0,259	0/0:13,1:15:7.04:0,7,137	0/0:15,0:16:2.89:0,3,113	1/1:1,3:11:18.87:79,19,0	1/1:8,11:21:30.07:161,30,0	0/1:10,9:22:15.47:101,0,15	1/1:5,0:8:4.10:10,4,0
chr10	96021445	.	TTCTCTCTCTCTC	T	1621.17	PASS	AB=0.905;AC=18;AF=0.333;AN=54;BaseQRankSum=0.539;DP=594;FS=5.837;HRun=0;HaplotypeScore=199.6970;InbreedingCoeff=0.3794;MQ=54.94;MQ0=9;MQRankSum=-2.154;QD=7.37;ReadPosRankSum=2.144;VQSLOD=2.1722;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:22.35:0,22,233	0/0:8,0:8:6:0,6,72	./.	0/0:21,0:16:0.77:0,1,2	0/0:15,0:15:18.02:0,18,288	1/1:10,13:22:9.03:232,9,0	0/1:20,14:34:99:150,0,123	0/0:39,0:54:40.41:0,40,370	0/0:24,0:25:36.11:0,36,876	0/1:17,0:17:67.24:212,0,67	1/1:10,15:24:8.76:113,9,0	0/1:16,10:26:40.08:222,0,40	1/1:12,0:12:7.97:213,8,0	0/0:9,0:22:2.29:0,2,17	0/0:17,0:21:20.82:0,21,324	0/0:21,0:23:18.50:0,18,227	1/1:18,0:17:2.60:248,3,0	0/1:6,0:5:29.68:30,0,55	0/0:21,0:17:24.04:0,24,403	0/0:21,0:21:16.34:0,16,454	0/0:26,0:25:8.90:0,9,186	1/1:6,9:15:11.93:269,12,0	1/1:8,7:15:3.01:41,3,0	0/1:14,0:13:0:0,0,0	0/0:17,0:21:35.86:0,36,483	0/0:24,0:26:59.68:0,60,1340	0/0:12,0:18:23.98:0,24,383	0/1:15,0:14:57.27:57,0,102
chr10	96021533	.	CTCTCTT	C	3634.17	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-2.795;DP=492;FS=5.483;HRun=0;HaplotypeScore=152.1524;InbreedingCoeff=-0.2711;MQ=62.29;MQ0=6;MQRankSum=2.296;QD=7.85;ReadPosRankSum=-1.035;VQSLOD=2.1080;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,28:40:14.70:212,15,0	0/1:6,0:6:37.90:38,0,62	0/0:13,0:11:26.89:0,27,265	0/1:31,0:18:19.17:19,0,177	0/1:18,0:17:11.34:144,0,11	0/1:18,0:17:12.41:164,0,12	0/1:13,0:13:4.86:58,0,5	1/1:24,0:23:5.40:243,5,0	0/1:21,0:20:87.89:123,0,88	0/1:22,0:22:99:214,0,115	1/1:18,0:18:13.27:186,13,0	1/1:25,0:25:40.90:303,41,0	0/1:14,0:14:39.01:130,0,39	1/1:19,0:18:9.38:223,9,0	0/1:18,0:18:12.52:61,0,13	1/1:18,0:18:24.42:174,24,0	0/1:14,0:14:35.39:93,0,35	0/1:9,0:8:3.59:86,0,4	0/1:10,0:10:36.29:162,0,36	1/1:16,0:16:22.98:153,23,0	0/1:10,0:10:4.22:16,0,4	1/1:11,0:11:21.18:145,21,0	0/1:12,0:12:3.53:107,0,4	1/1:14,0:13:1.80:43,2,0	0/0:16,0:15:14.54:0,15,168	0/1:26,0:24:99:230,0,278	0/1:23,0:23:90.94:226,0,91	0/1:12,0:11:44.46:81,0,44
chr10	96021748	.	GA	G	3962.25	PASS	AB=0.769;AC=24;AF=0.429;AN=56;BaseQRankSum=7.177;DP=614;FS=2.543;HRun=11;HaplotypeScore=76.3612;InbreedingCoeff=0.7390;MQ=76.38;MQ0=8;MQRankSum=2.050;QD=11.48;ReadPosRankSum=3.173;VQSLOD=3.5497;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:8,22:30:30.09:402,0,30	1/1:0,6:6:14.98:123,15,0	0/1:55,2:29:10.30:10,0,242	0/1:52,1:29:50.44:50,0,98	0/1:4,12:17:0:195,0,0	0/0:18,0:18:45.10:0,45,472	0/0:15,1:17:17.24:0,17,352	0/0:36,0:35:75.18:0,75,792	1/1:3,13:16:26.96:222,27,0	0/0:13,0:13:36.09:0,36,380	0/0:20,2:22:29.49:0,29,517	0/0:19,1:20:25.99:0,26,472	0/0:17,0:18:47.92:0,48,477	0/0:12,0:12:27.07:0,27,288	1/1:3,15:18:27.52:306,28,0	1/1:3,17:20:35.95:295,36,0	0/0:33,2:36:46.35:0,46,877	0/0:10,0:11:23.89:0,24,237	1/1:5,15:21:43.96:350,44,0	1/1:7,28:35:80.88:665,81,0	1/1:0,3:3:8.99:74,9,0	0/0:13,0:15:35.91:0,36,359	0/0:21,0:22:59.98:0,60,619	0/0:14,0:14:39.10:0,39,415	1/1:3,24:27:53.93:443,54,0	1/1:3,21:24:33.91:482,34,0	1/1:3,14:17:41.95:345,42,0	0/0:15,0:15:33.08:0,33,351
chr10	96022165	.	G	GT	17245.73	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.532;DP=797;FS=2.483;HRun=10;HaplotypeScore=77.4234;InbreedingCoeff=0.8957;MQ=73.13;MQ0=0;MQRankSum=-4.801;QD=22.34;ReadPosRankSum=1.472;VQSLOD=5.7473;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,2:49:91.24:492,91,0	1/1:2,12:14:11.46:327,11,0	0/0:14,0:14:23.28:0,23,195	0/0:10,0:11:8.19:0,8,114	1/1:9,30:39:75.02:770,75,0	1/1:3,20:23:48.09:496,48,0	1/1:4,16:20:48.12:510,48,0	1/1:10,25:35:69.13:723,69,0	1/1:1,26:30:64.99:694,65,0	1/1:4,33:38:99:1014,99,0	1/1:4,19:23:54.14:576,54,0	1/1:0,18:19:47.99:494,48,0	1/1:3,24:28:78.01:804,78,0	1/1:6,17:23:7.63:485,8,0	1/1:6,29:38:62.14:819,62,0	1/1:4,23:27:41.52:647,42,0	1/1:1,22:26:62.66:618,63,0	1/1:6,15:21:39.98:417,40,0	1/1:7,20:30:68.69:674,69,0	1/1:2,32:37:99:998,102,0	1/1:5,31:37:59.40:821,59,0	1/1:5,24:30:50.39:701,50,0	1/1:7,11:18:39.08:403,39,0	1/1:3,27:30:72.18:768,72,0	1/1:5,28:36:62.14:818,62,0	1/1:6,32:38:90.18:935,90,0	1/1:12,27:39:13.11:740,13,0	1/1:5,18:24:29.33:501,29,0
chr10	96022729	.	AT	A	1969.34	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=3.761;DP=240;FS=7.168;HRun=2;HaplotypeScore=59.3150;InbreedingCoeff=0.5631;MQ=68.34;MQ0=0;MQRankSum=-0.285;QD=13.58;ReadPosRankSum=-3.515;VQSLOD=1.1598;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,7:9:20.14:168,20,0	1/1:1,0:1:3:25,3,0	0/1:7,0:5:19.63:20,0,42	0/1:1,0:1:0:0,0,0	1/1:5,13:18:42.75:360,43,0	0/1:14,0:14:15.09:15,0,144	0/0:4,0:4:7.06:0,7,57	0/0:17,0:17:12.27:0,12,46	1/1:2,0:2:1.25:3,1,0	0/0:15,0:15:33.31:0,33,202	0/0:12,0:12:4.71:0,5,142	0/0:6,0:6:10.56:0,11,67	0/0:11,0:11:25.44:0,25,195	0/1:7,0:7:14.35:14,0,53	1/1:1,5:6:16.24:134,16,0	1/1:3,4:7:15.88:133,16,0	0/0:7,0:7:10.50:0,11,83	0/1:11,0:11:3.47:3,0,124	1/1:2,6:7:14.72:145,15,0	1/1:2,8:10:25.77:216,26,0	1/1:0,5:5:11.97:96,12,0	0/0:2,0:2:1.17:0,1,18	0/0:8,0:8:20.58:0,21,122	0/0:8,0:8:12.57:0,13,102	1/1:0,9:9:24.02:231,24,0	1/1:4,12:16:42.43:358,42,0	1/1:3,11:14:29.48:240,29,0	0/0:5,0:5:5.77:0,6,14
chr10	96022807	.	CA	C	785.90	PASS	AC=30;AF=0.938;AN=32;BaseQRankSum=-1.733;DP=58;FS=0.000;HRun=4;HaplotypeScore=13.0489;InbreedingCoeff=0.0722;MQ=48.10;MQ0=0;MQRankSum=-1.733;QD=20.68;ReadPosRankSum=1.467;VQSLOD=1.8186;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,1:3:3.01:35,3,0	./.	0/0:2,0:1:3:0,3,28	./.	./.	1/1:0,3:3:9.03:105,9,0	./.	1/1:1,6:7:15.04:175,15,0	1/1:0,1:1:3.01:35,3,0	1/1:0,1:1:3.01:35,3,0	1/1:0,5:4:9.03:105,9,0	1/1:1,1:2:3.01:35,3,0	1/1:0,2:2:6.02:68,6,0	1/1:0,1:1:3.01:35,3,0	1/1:1,1:2:3.01:35,3,0	1/1:0,3:3:3.01:35,3,0	./.	./.	1/1:0,3:2:6.02:70,6,0	./.	./.	1/1:0,2:1:3.01:35,3,0	1/1:0,2:2:3.01:35,3,0	./.	./.	1/1:0,1:1:3.01:35,3,0	./.	./.
chr10	96025784	.	TTTTTTTC	T	1482.63	PASS	AB=0.977;AC=24;AF=0.429;AN=56;BaseQRankSum=2.298;DP=444;FS=39.298;HRun=0;HaplotypeScore=93.8853;InbreedingCoeff=-0.3888;MQ=37.96;MQ0=40;MQRankSum=-1.248;QD=4.81;ReadPosRankSum=4.907;VQSLOD=-0.0792;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:26:59.99:125,0,60	0/1:7,0:6:17.48:17,0,21	0/0:17,0:4:7.56:0,8,98	0/0:15,0:3:3.31:0,3,11	0/0:25,0:21:3.23:0,3,175	0/1:9,2:9:19.77:153,0,20	1/1:11,0:9:17.32:124,17,0	0/1:18,0:16:26.78:27,0,107	0/1:14,0:13:55.50:55,0,93	0/1:20,1:19:8.93:232,0,9	0/1:9,1:9:22.42:77,0,22	0/1:10,0:10:29.40:29,0,30	0/1:7,0:7:25.30:58,0,25	0/1:11,0:10:20.33:50,0,20	0/1:15,0:14:7.95:8,0,249	1/1:11,1:12:7.95:143,8,0	0/0:37,0:34:79.63:0,80,1568	0/0:22,0:19:36.03:0,36,800	0/1:16,0:13:79.91:80,0,119	0/1:19,0:15:47.61:48,0,76	0/0:7,0:5:6.63:0,7,47	0/1:17,1:17:29.34:84,0,29	1/1:11,1:7:12.26:113,12,0	0/1:12,1:13:28.40:90,0,28	0/0:13,0:10:1.07:0,1,75	0/1:24,0:23:92.92:93,0,309	0/1:20,0:20:22.02:22,0,325	0/1:9,0:6:15.58:16,0,53
chr10	96025785	.	TTTTTTC	T	1956.23	PASS	AB=0.956;AC=31;AF=0.554;AN=56;BaseQRankSum=3.380;DP=415;FS=32.519;HRun=0;HaplotypeScore=80.8283;InbreedingCoeff=-0.0404;MQ=37.95;MQ0=39;MQRankSum=-1.685;QD=6.48;ReadPosRankSum=6.492;VQSLOD=-0.1424;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:24:9.72:239,10,0	0/1:7,0:6:2.01:38,0,2	0/0:16,0:4:8.31:0,8,80	0/0:14,0:2:2.29:0,2,6	0/0:24,0:21:6.80:0,7,120	0/1:10,0:9:3.46:118,0,3	1/1:10,0:8:17.65:178,18,0	0/1:15,0:13:12.56:13,0,167	0/1:13,0:12:30.49:72,0,30	1/1:14,2:14:10.30:265,10,0	0/1:8,1:8:6.74:62,0,7	0/1:1,8:9:14.74:52,0,15	1/1:6,0:6:12.23:98,12,0	0/1:10,0:9:2.87:51,0,3	0/1:15,0:14:37.46:37,0,140	1/1:9,0:9:18.73:179,19,0	0/0:37,0:34:75.43:0,75,1312	0/0:22,0:19:33.53:0,34,642	0/1:15,0:12:64.55:108,0,65	0/1:18,0:14:39.57:47,0,40	0/1:7,0:5:2.70:3,0,21	1/1:16,1:16:17.81:126,18,0	1/1:11,1:7:15.95:109,16,0	1/1:11,1:12:6.22:132,6,0	0/1:12,0:9:8.18:16,0,8	0/1:23,0:22:99:115,0,167	0/1:20,0:20:57.89:58,0,199	0/1:8,0:5:9.89:10,0,66
chr10	96025786	.	TTTTTC	T	2143.28	PASS	AB=0.987;AC=37;AF=0.661;AN=56;BaseQRankSum=4.179;DP=401;FS=17.100;HRun=0;HaplotypeScore=71.8189;InbreedingCoeff=0.2411;MQ=35.50;MQ0=39;MQRankSum=0.439;QD=7.65;ReadPosRankSum=6.192;VQSLOD=-0.0528;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,1:21:11.35:219,11,0	1/1:5,1:5:7.81:79,8,0	0/0:13,0:2:3.01:0,3,34	0/0:12,0:1:0.47:0,0,1	0/0:23,0:20:1.05:0,1,59	1/1:11,0:9:13.04:127,13,0	1/1:9,1:8:17.71:172,18,0	0/0:15,0:13:7:0,7,180	1/1:13,0:12:7.98:101,8,0	1/1:17,0:15:19.71:235,20,0	1/1:10,0:9:1.08:72,1,0	1/1:9,0:9:2.80:44,3,0	1/1:5,0:5:11.42:80,11,0	1/1:10,0:9:7.21:75,7,0	0/1:15,0:14:52.25:109,0,52	1/1:9,0:9:16.68:145,17,0	0/0:36,0:33:74.20:0,74,1057	0/0:22,0:19:33.08:0,33,504	0/1:15,0:12:23.91:126,0,24	0/1:17,0:13:12.42:55,0,12	0/1:8,0:6:8.09:15,0,8	1/1:15,1:15:11.63:79,12,0	1/1:12,0:7:14.64:120,15,0	1/1:10,0:10:9.58:119,10,0	1/1:11,1:9:11.15:57,11,0	0/1:21,1:21:75.28:170,0,75	0/1:19,1:20:85.59:107,0,86	0/1:8,0:5:4.48:4,0,62
chr10	96025787	.	TTTTC	T	2431.04	PASS	AB=0.964;AC=40;AF=0.714;AN=56;BaseQRankSum=4.873;DP=391;FS=6.721;HRun=0;HaplotypeScore=65.2900;InbreedingCoeff=0.4529;MQ=35.86;MQ0=39;MQRankSum=-2.310;QD=8.50;ReadPosRankSum=5.013;VQSLOD=0.9381;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:21:11.27:185,11,0	1/1:6,0:5:8.92:86,9,0	0/0:11,0:2:3.01:0,3,39	0/0:12,0:1:0.47:0,0,1	0/1:21,0:18:13.07:13,0,16	1/1:11,0:9:12.25:130,12,0	1/1:10,0:8:20.82:169,21,0	0/0:15,0:13:19.30:0,19,202	1/1:11,2:12:18.37:145,18,0	1/1:20,0:18:30.91:276,31,0	0/1:10,0:9:4.43:62,0,4	1/1:8,0:8:3.01:37,3,0	1/1:6,0:6:11.79:92,12,0	1/1:8,0:7:6.64:63,7,0	1/1:13,2:14:3.29:192,3,0	1/1:9,0:9:14.02:123,14,0	0/0:36,0:33:64.39:0,64,791	0/0:21,0:18:32.93:0,33,380	1/1:6,7:11:10.67:173,11,0	1/1:15,0:11:12.51:98,13,0	1/1:8,0:6:0.96:29,1,0	1/1:16,0:15:14.20:96,14,0	1/1:12,0:7:15.78:102,16,0	1/1:10,0:10:8.19:104,8,0	1/1:11,0:8:11.96:96,12,0	0/1:19,1:19:5.59:200,0,6	0/1:17,2:19:31.08:127,0,31	0/0:10,0:7:7.91:0,8,108
chr10	96025788	.	TTTC	T	2611.74	PASS	AC=44;AF=0.815;AN=54;BaseQRankSum=4.455;DP=375;FS=0.000;HRun=0;HaplotypeScore=60.0107;InbreedingCoeff=0.7143;MQ=35.57;MQ0=40;MQRankSum=-1.259;QD=9.46;ReadPosRankSum=3.355;VQSLOD=2.6822;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:20:22.63:184,23,0	1/1:3,3:5:9.02:97,9,0	0/0:10,0:2:3:0,3,29	./.	1/1:8,12:17:1.46:35,1,0	1/1:10,0:8:12.61:117,13,0	1/1:11,0:8:20.58:137,21,0	0/0:15,0:13:28.38:0,28,247	1/1:11,1:11:19.82:167,20,0	1/1:21,0:19:32.68:253,33,0	1/1:9,0:8:2.79:72,3,0	1/1:8,0:8:3.01:31,3,0	1/1:7,0:7:14.08:101,14,0	1/1:8,0:7:7.07:60,7,0	1/1:11,3:13:28.08:296,28,0	1/1:9,0:9:14.61:109,15,0	0/0:33,0:30:55.92:0,56,569	0/0:20,0:17:26.85:0,27,250	1/1:12,0:10:18.93:159,19,0	1/1:14,1:11:15.74:120,16,0	1/1:5,1:4:1.89:38,2,0	1/1:15,0:14:14.53:76,15,0	1/1:12,0:7:17.20:108,17,0	1/1:10,0:10:13.37:113,13,0	1/1:4,7:8:12.04:153,12,0	1/1:6,12:17:27.94:233,28,0	1/1:16,2:18:7.26:118,7,0	0/0:10,0:7:13.28:0,13,115
chr10	96025789	.	TTC	T	2530.08	PASS	AC=44;AF=0.815;AN=54;BaseQRankSum=2.680;DP=358;FS=2.541;HRun=0;HaplotypeScore=54.3287;InbreedingCoeff=0.7856;MQ=35.22;MQ0=36;MQRankSum=-1.136;QD=9.51;ReadPosRankSum=1.866;VQSLOD=3.3190;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:21:31.37:212,31,0	1/1:4,1:5:9:84,9,0	0/0:9,0:2:2.97:0,3,20	./.	1/1:18,0:15:2.61:23,3,0	1/1:10,0:8:15.65:122,16,0	1/1:11,0:8:19.68:119,20,0	0/0:15,0:13:33.50:0,33,251	1/1:11,0:11:20.23:137,20,0	1/1:21,0:19:34.31:235,34,0	1/1:9,0:8:10.84:85,11,0	1/1:8,0:8:2.99:24,3,0	1/1:7,0:7:14.30:102,14,0	1/1:9,0:8:15.62:101,16,0	1/1:12,1:13:35.52:284,36,0	1/1:9,0:9:17.37:103,17,0	0/0:29,0:26:38.35:0,38,370	0/0:19,0:16:21.56:0,22,169	1/1:9,0:8:19.52:147,20,0	1/1:14,0:10:15.87:109,16,0	1/1:6,0:4:2.67:26,3,0	1/1:15,0:14:20.51:137,21,0	1/1:12,0:7:17.44:106,17,0	1/1:10,0:10:15.96:110,16,0	1/1:11,0:8:11.98:99,12,0	1/1:16,0:16:28.97:208,29,0	1/1:7,8:15:14.31:125,14,0	0/0:10,0:7:16.51:0,17,122
chr10	96025790	.	TC	T	2487.32	PASS	AC=44;AF=0.815;AN=54;BaseQRankSum=2.365;DP=339;FS=8.384;HRun=2;HaplotypeScore=49.5854;InbreedingCoeff=0.8022;MQ=35.70;MQ0=34;MQRankSum=-1.053;QD=9.60;ReadPosRankSum=1.230;VQSLOD=0.8034;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:20:38.21:228,38,0	1/1:5,0:5:8.88:58,9,0	0/0:7,0:2:2.80:0,3,13	./.	1/1:15,0:13:2.94:18,3,0	1/1:10,0:8:18.42:115,18,0	1/1:11,0:8:20.09:115,20,0	0/0:13,0:12:35.14:0,35,236	1/1:11,0:11:20.08:123,20,0	1/1:6,14:18:35.28:236,35,0	1/1:7,1:8:17.35:97,17,0	1/1:8,0:8:2.92:17,3,0	1/1:7,1:8:18.22:121,18,0	1/1:9,0:8:20.69:134,21,0	1/1:12,1:13:35.49:232,35,0	1/1:9,0:9:20.48:126,20,0	0/0:27,0:24:38.39:0,38,318	0/0:17,0:14:14.98:0,15,128	1/1:9,0:8:20.76:139,21,0	1/1:13,0:10:18.24:110,18,0	1/1:6,0:4:2.97:20,3,0	1/1:15,0:14:28.77:177,29,0	1/1:12,0:7:17.39:98,17,0	1/1:10,0:10:20.50:127,21,0	1/1:11,0:8:11.80:73,12,0	1/1:16,0:15:29.49:198,29,0	1/1:14,0:14:14.68:93,15,0	0/0:10,0:7:17.63:0,18,128
chr10	96025907	.	CTG	C	937.38	PASS	AB=0.888;AC=29;AF=0.518;AN=56;BaseQRankSum=7.127;DP=533;FS=1.187;HRun=0;HaplotypeScore=121.4408;InbreedingCoeff=0.1243;MQ=48.03;MQ0=18;MQRankSum=-2.271;QD=2.78;ReadPosRankSum=1.313;VQSLOD=2.6482;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:2.22:7,2,0	0/1:6,1:6:23.94:24,0,120	0/0:43,0:19:26.92:0,27,256	0/0:51,0:21:13.38:0,13,179	0/1:17,1:18:41.86:42,0,351	1/1:11,4:15:5.70:32,6,0	1/1:16,2:18:8.95:67,9,0	0/1:32,2:32:50.60:183,0,51	0/0:13,0:13:23.47:0,23,347	0/1:15,8:23:8.11:201,0,8	1/1:13,6:19:2.99:24,3,0	0/1:9,2:11:11.46:51,0,11	1/1:4,3:7:14.76:96,15,0	0/1:9,2:12:1.53:52,0,2	0/1:18,1:19:5.92:6,0,344	0/0:7,0:7:0.96:0,1,21	0/1:21,2:22:57.23:57,0,553	0/0:17,0:17:39.05:0,39,572	0/0:18,0:16:23.80:0,24,336	0/1:20,0:20:23.42:23,0,623	0/0:37,1:38:51.46:0,51,1213	1/1:8,6:14:5.99:49,6,0	1/1:12,5:17:2.99:24,3,0	1/1:15,0:15:2.99:24,3,0	0/1:11,3:14:2.88:3,0,415	0/1:20,2:22:29.79:30,0,486	0/0:9,0:9:21.07:0,21,323	1/1:3,5:8:15.82:116,16,0
chr10	96025929	.	CTCTG	C	707.90	PASS	AB=0.862;AC=13;AF=0.232;AN=56;BaseQRankSum=10.664;DP=653;FS=28.447;HRun=0;HaplotypeScore=164.5786;InbreedingCoeff=-0.1054;MQ=43.44;MQ0=33;MQRankSum=-2.922;QD=2.85;ReadPosRankSum=-2.052;VQSLOD=1.0005;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:23:8.29:8,0,50	0/0:5,0:4:11.95:0,12,223	0/0:44,0:12:22.70:0,23,314	0/0:63,0:14:20.16:0,20,314	0/0:26,0:25:54.13:0,54,1203	0/1:11,4:15:76.73:77,0,131	0/1:29,2:31:10.40:10,0,591	0/1:51,3:42:39.98:40,0,1895	0/0:14,0:13:17.82:0,18,686	0/1:19,8:27:99:269,0,673	0/0:11,6:17:15.05:0,15,341	0/1:13,2:15:20.33:20,0,123	0/1:10,3:13:99:124,0,185	0/1:11,3:15:51.48:51,0,126	0/0:23,0:23:33.06:0,33,760	1/1:9,0:9:11.67:98,12,0	0/0:25,0:24:31.72:0,32,1233	0/0:15,0:15:42.10:0,42,987	0/0:21,0:13:22.04:0,22,425	0/0:20,0:20:37.17:0,37,1155	0/0:60,0:56:99:0,144,3458	0/0:9,6:15:9:0,9,206	0/1:12,5:17:6.44:6,0,39	0/1:13,0:13:27.92:28,0,73	0/0:16,0:16:39.07:0,39,757	0/0:26,0:25:69.11:0,69,1366	0/0:13,0:13:33.05:0,33,691	0/1:9,5:14:99:130,0,282
chr10	96026017	.	CTG	C	4250.16	PASS	AB=0.748;AC=20;AF=0.357;AN=56;BaseQRankSum=6.385;DP=816;FS=0.796;HRun=0;HaplotypeScore=189.4032;InbreedingCoeff=0.7780;MQ=47.10;MQ0=35;MQRankSum=2.347;QD=15.68;ReadPosRankSum=0.886;VQSLOD=4.6142;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:50:38.31:0,38,604	0/0:12,0:11:28.65:0,29,443	0/0:33,0:11:15.88:0,16,209	0/0:37,0:6:0.93:0,1,38	0/0:22,0:22:48.06:0,48,716	1/1:6,15:19:24.07:305,24,0	1/1:16,15:31:35.14:604,35,0	0/0:66,0:47:61.20:0,61,1309	0/0:20,0:20:33:0,33,504	1/1:19,19:35:31.30:899,31,0	1/1:4,11:15:27.09:344,27,0	1/1:11,12:22:36.53:431,37,0	1/1:6,11:17:23.85:304,24,0	0/1:5,14:17:14.61:172,0,15	0/0:26,0:26:17.52:0,18,775	0/0:27,0:27:68.89:0,69,1062	0/0:19,0:19:51.17:0,51,798	0/1:21,2:22:20.73:21,0,581	0/0:26,0:17:36.12:0,36,541	0/0:21,0:21:62.24:0,62,977	0/0:104,1:101:99:0,143,2903	1/1:13,14:28:21.45:485,21,0	1/1:5,18:22:24.08:304,24,0	1/1:15,18:30:30.10:381,30,0	0/0:20,0:20:45.14:0,45,704	0/0:31,0:30:84.29:0,84,1358	0/0:14,1:15:1.17:0,1,463	0/0:11,0:11:24.08:0,24,396
chr10	96026079	.	CTG	C	2589.47	PASS	AB=0.785;AC=18;AF=0.346;AN=52;BaseQRankSum=7.719;DP=754;FS=10.298;HRun=0;HaplotypeScore=157.1445;InbreedingCoeff=0.7976;MQ=40.72;MQ0=66;MQRankSum=-2.771;QD=11.61;ReadPosRankSum=-0.873;VQSLOD=2.9035;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:43:31.68:0,32,472	0/0:12,0:11:11.66:0,12,111	./.	./.	0/0:23,0:23:15.03:0,15,228	1/1:8,10:17:9.03:112,9,0	0/1:20,13:32:0.59:372,0,1	0/0:65,0:49:29.23:0,29,997	0/0:21,0:21:12.04:0,12,199	1/1:20,25:41:56.20:978,56,0	1/1:8,4:11:9.02:100,9,0	1/1:7,12:19:24.55:303,25,0	1/1:6,9:14:14.51:156,15,0	1/1:6,8:14:12.51:146,13,0	0/0:25,0:25:21.04:0,21,291	0/0:22,0:21:19.37:0,19,232	0/0:42,0:41:99:0,104,1662	0/0:32,0:31:84.20:0,84,1337	0/0:21,0:8:20.86:0,21,307	0/0:20,0:15:11.96:0,12,145	0/0:86,1:76:77.70:0,78,1239	1/1:13,17:24:30.09:375,30,0	1/1:6,8:11:12.03:142,12,0	0/1:19,4:23:9.96:98,0,10	0/0:16,1:16:6.02:0,6,98	0/0:34,2:29:15.62:0,16,735	0/0:9,0:9:8.99:0,9,100	0/0:9,0:8:14.77:0,15,175
chr10	96026091	.	CTG	C	713.59	PASS	AB=0.933;AC=17;AF=0.315;AN=54;BaseQRankSum=5.298;DP=717;FS=1.202;HRun=0;HaplotypeScore=149.4155;InbreedingCoeff=-0.1182;MQ=38.94;MQ0=66;MQRankSum=-7.213;QD=1.69;ReadPosRankSum=-3.784;VQSLOD=1.4003;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,4:38:7.94:8,0,271	0/0:8,1:9:1.56:0,2,4	0/0:16,0:2:5.48:0,5,24	./.	0/0:20,0:20:12.02:0,12,165	0/0:17,0:17:3.07:0,3,11	0/0:28,0:27:18.86:0,19,92	0/1:41,18:39:99:481,0,378	0/0:22,1:23:9.03:0,9,128	0/1:46,0:42:24.08:24,0,157	1/1:11,0:10:0.89:2,1,0	1/1:19,0:19:0.24:16,0,0	1/1:13,0:12:3.44:12,3,0	0/1:16,0:16:3.41:3,0,6	0/0:22,0:22:6.02:0,6,94	0/1:14,7:20:87.46:87,0,98	0/0:46,0:45:99:0,102,1599	0/0:32,0:32:84.20:0,84,1328	0/1:28,0:10:45.15:45,0,154	0/0:20,0:15:7.85:0,8,66	0/1:68,4:62:21.87:22,0,476	0/1:27,0:22:3.58:4,0,31	0/0:12,0:9:6.96:0,7,23	0/1:23,0:24:13.05:13,0,16	0/0:18,0:17:3:0,3,25	0/1:27,4:24:99:129,0,320	0/0:12,0:12:5.69:0,6,62	0/1:10,0:9:4.35:4,0,53
chr10	96026103	.	CTG	C	3740.05	PASS	AB=0.947;AC=29;AF=0.558;AN=52;BaseQRankSum=3.341;DP=692;FS=2.333;HRun=0;HaplotypeScore=126.0035;InbreedingCoeff=0.3564;MQ=38.99;MQ0=47;MQRankSum=-0.993;QD=8.24;ReadPosRankSum=-3.254;VQSLOD=3.0504;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:38,4:38:0.34:247,0,0	0/0:5,1:7:1.09:0,1,3	0/0:16,0:3:8.89:0,9,68	0/0:22,0:1:2.50:0,2,9	0/0:22,0:22:0:0,0,0	1/1:10,2:13:3.01:35,3,0	1/1:24,10:31:42.02:495,42,0	1/1:36,18:33:17.52:562,18,0	0/0:21,1:22:1.55:0,2,4	1/1:21,22:39:47.75:903,48,0	1/1:5,6:10:3.01:38,3,0	1/1:11,7:18:12.39:133,12,0	1/1:7,6:12:11.97:129,12,0	1/1:6,10:16:12.27:153,12,0	./.	1/1:16,8:23:12.18:284,12,0	0/0:47,0:46:78.86:0,79,1598	0/0:35,0:35:83.97:0,84,1243	0/1:26,0:9:30.05:48,0,30	./.	0/1:71,3:64:93.58:154,0,94	1/1:15,7:18:17.87:179,18,0	1/1:6,4:8:9.03:110,9,0	1/1:16,4:20:1.20:3,1,0	0/0:17,0:16:2.37:0,2,8	0/1:21,4:20:37.55:240,0,38	0/0:12,0:12:2.98:0,3,22	0/1:8,0:9:13.15:29,0,13
chr10	96026105	.	G	GTGTGTGTC	5175.57	PASS	AB=0.947;AC=29;AF=0.558;AN=52;BaseQRankSum=-3.276;DP=730;FS=10.338;HRun=0;HaplotypeScore=168.4447;InbreedingCoeff=0.2666;MQ=39.76;MQ0=48;MQRankSum=-2.233;QD=10.11;ReadPosRankSum=-3.940;VQSLOD=1.9968;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,5:37:22.41:517,22,0	0/1:7,0:7:0:0,0,0	0/0:16,0:3:8.90:0,9,69	0/0:23,0:1:2.50:0,2,9	0/1:3,16:24:0.11:0,0,0	1/1:12,0:12:5.67:53,6,0	0/1:35,0:32:99:188,0,110	1/1:56,0:35:75.09:1332,75,0	1/1:2,20:26:3.01:129,3,0	0/1:45,0:40:99:144,0,497	1/1:11,0:10:2.80:13,3,0	0/1:21,0:21:23.74:24,0,89	0/1:13,0:12:7.75:8,0,63	0/1:16,0:16:22.47:52,0,22	./.	1/1:26,0:25:20.66:492,21,0	0/0:47,0:46:71.59:0,72,2387	0/0:36,0:36:78.89:0,79,1905	1/1:18,8:10:23.65:519,24,0	./.	0/1:77,1:67:38.35:397,0,38	0/0:22,0:18:14.02:0,14,149	0/0:11,0:9:9.03:0,9,147	0/1:22,0:22:1.59:33,0,2	0/0:3,14:17:2.37:0,2,8	1/1:22,2:19:24.87:875,25,0	1/1:1,10:14:3.01:130,3,0	1/1:2,7:13:9.03:271,9,0
chr10	96026111	.	GTGTGTC	G	731.65	PASS	AB=0.989;AC=9;AF=0.167;AN=54;BaseQRankSum=-0.073;DP=730;FS=10.427;HRun=0;HaplotypeScore=172.6608;InbreedingCoeff=-0.0689;MQ=39.54;MQ0=40;MQRankSum=-2.619;QD=2.47;ReadPosRankSum=-4.194;VQSLOD=0.8214;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:44,1:41:99:184,0,364	0/0:7,0:7:5.92:0,6,42	0/0:21,0:3:9.02:0,9,119	0/0:27,0:1:3:0,3,25	0/0:22,0:22:7.20:0,7,63	0/0:11,0:11:5.74:0,6,65	0/0:33,0:30:49.28:0,49,650	0/1:52,1:33:99:123,0,426	0/1:27,0:27:30.01:47,0,30	0/0:45,0:40:75.24:0,75,1138	0/0:10,0:9:3.01:0,3,46	0/0:21,0:21:20.65:0,21,210	0/0:11,0:11:11.38:0,11,126	0/0:15,0:15:11.79:0,12,167	0/1:22,0:22:6.99:18,0,7	0/0:27,1:27:7.95:0,8,280	0/0:48,0:47:99:0,117,3208	0/0:34,0:34:91.82:0,92,2643	0/1:24,0:11:99:158,0,191	./.	0/1:79,0:67:99:227,0,272	0/0:22,0:18:14.02:0,14,150	0/0:11,0:9:9.03:0,9,140	1/1:21,0:21:2.82:19,3,0	0/0:19,0:18:5.85:0,6,63	0/1:24,1:21:87.93:88,0,400	0/0:15,0:15:8.44:0,8,52	0/0:14,0:14:9.84:0,10,84
chr10	96026135	.	ATCTGTGTGTGTG	A	1705.85	PASS	AB=0.864;AC=15;AF=0.288;AN=52;BaseQRankSum=1.189;DP=713;FS=2.713;HRun=0;HaplotypeScore=219.2514;InbreedingCoeff=0.5642;MQ=39.44;MQ0=46;MQRankSum=-1.823;QD=12.27;ReadPosRankSum=1.899;VQSLOD=2.5026;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:45:50.70:0,51,2327	0/0:8,0:8:8.95:0,9,262	./.	./.	0/0:22,0:22:25.17:0,25,924	1/1:5,3:8:2.95:102,3,0	1/1:25,0:21:21.07:424,21,0	0/0:39,0:24:6.02:0,6,95	0/0:29,0:29:21.07:0,21,989	0/1:29,4:28:25.27:649,0,25	0/1:8,1:9:0:0,0,0	1/1:9,8:17:5.73:403,6,0	1/1:7,0:7:3:72,3,0	1/1:7,4:11:2.49:100,2,0	0/0:27,0:27:23.87:0,24,899	0/0:37,0:37:57.07:0,57,2281	0/0:49,0:47:75.28:0,75,2940	0/0:34,0:33:48.16:0,48,2341	0/0:24,0:11:15.05:0,15,385	0/0:20,0:17:3.01:0,3,121	0/0:87,0:77:45.29:0,45,1729	0/1:9,3:9:0.10:0,0,0	0/0:8,1:6:0:0,0,0	1/1:14,3:17:3:100,3,0	0/0:18,0:16:5.69:0,6,300	0/0:37,0:29:61.45:0,61,2207	0/0:14,0:14:11.85:0,12,352	0/0:13,0:13:6.02:0,6,327
chr10	96026195	.	TTGTGTGTGTCTCTG	T	3962.97	PASS	AB=0.800;AC=19;AF=0.339;AN=56;BaseQRankSum=4.059;DP=806;FS=49.538;HRun=0;HaplotypeScore=342.9702;InbreedingCoeff=0.8824;MQ=47.57;MQ0=25;MQRankSum=-4.127;QD=18.52;ReadPosRankSum=-3.515;VQSLOD=0.3007;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:74,0:72:80.80:0,81,3213	1/1:6,0:6:5.96:45,6,0	0/0:52,0:11:17.93:0,18,245	0/0:54,0:14:26.48:0,26,323	1/1:15,5:20:26.86:235,27,0	0/0:23,0:22:47.44:0,47,2015	0/0:37,0:37:72.16:0,72,3189	0/0:45,0:38:90.23:0,90,2819	1/1:16,6:22:41.67:359,42,0	0/0:38,0:37:97.91:0,98,3727	0/0:16,0:16:27.09:0,27,1128	0/0:32,0:31:49:0,49,2602	0/0:14,0:14:36.12:0,36,1436	0/0:21,0:21:42.14:0,42,2079	1/1:18,5:23:26.91:483,27,0	0/0:31,0:31:26.14:0,26,1737	0/0:41,0:39:96.28:0,96,4290	0/0:35,0:35:72.48:0,72,3350	1/1:9,5:11:29.99:827,30,0	1/1:7,5:11:14.46:89,14,0	1/1:57,1:52:12.39:182,12,0	0/0:21,0:21:42.14:0,42,1795	0/0:15,0:15:21.07:0,21,889	0/0:33,0:33:24.08:0,24,974	1/1:6,7:12:11.90:85,12,0	0/1:24,8:31:41.94:1224,0,42	1/1:11,3:14:17.98:435,18,0	0/0:9,0:9:12.04:0,12,701
chr10	96026235	.	C	CTG	2875.67	PASS	AB=0.669;AC=16;AF=0.308;AN=52;BaseQRankSum=7.390;DP=757;FS=4.908;HRun=0;HaplotypeScore=263.6939;InbreedingCoeff=0.6310;MQ=38.42;MQ0=47;MQRankSum=-4.574;QD=12.29;ReadPosRankSum=-4.077;VQSLOD=2.1229;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:56:63.43:0,63,758	0/1:1,2:3:30.86:36,0,31	./.	./.	0/1:9,6:14:19.70:103,0,20	0/0:28,0:26:42.26:0,42,513	0/0:37,0:35:41.97:0,42,526	0/0:38,0:30:57.12:0,57,673	1/1:10,14:24:50.53:577,51,0	0/0:47,0:40:72.93:0,73,862	0/0:15,0:15:21.52:0,22,230	0/0:24,0:22:34.05:0,34,482	0/0:13,0:13:30.09:0,30,364	0/0:20,0:19:39.12:0,39,483	0/1:7,7:14:13.74:134,0,14	0/0:18,0:17:24.38:0,24,272	0/0:44,0:43:99:0,105,1245	0/0:35,0:34:80.52:0,81,953	1/1:20,8:14:36:478,36,0	0/1:9,7:16:10.51:186,0,11	1/1:51,17:58:17.68:318,18,0	0/0:20,0:20:39.12:0,39,462	0/0:14,0:14:11.94:0,12,141	0/0:27,0:27:12.04:0,12,152	1/1:9,4:10:17.76:144,18,0	1/1:19,16:33:17.30:801,17,0	1/1:9,8:16:18.03:285,18,0	0/0:5,0:5:12.04:0,12,152
chr10	96026259	.	GTC	G	1013.43	PASS	AB=0.985;AC=22;AF=0.440;AN=50;BaseQRankSum=5.131;DP=731;FS=7.026;HRun=0;HaplotypeScore=254.7782;InbreedingCoeff=0.2141;MQ=38.05;MQ0=62;MQRankSum=-5.826;QD=2.73;ReadPosRankSum=-2.903;VQSLOD=1.0114;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:34:6.80:0,7,161	0/1:8,0:7:16.89:17,0,150	./.	./.	0/0:21,0:20:8.05:0,8,287	0/1:22,1:20:25.10:70,0,25	1/1:37,0:29:4.80:43,5,0	0/1:54,0:22:25.91:26,0,45	0/0:26,0:26:1.84:0,2,438	1/1:42,0:34:46.19:408,46,0	1/1:11,0:10:3.01:36,3,0	0/1:18,0:16:6.92:64,0,7	1/1:11,0:10:11.95:121,12,0	1/1:19,0:17:15.41:140,15,0	0/0:18,0:17:15.03:0,15,229	0/1:19,0:17:32.75:33,0,41	0/0:41,0:40:29.18:0,29,1193	0/1:34,3:36:24.34:24,0,1013	0/1:29,0:12:21.77:22,0,220	0/0:16,0:16:17.65:0,18,276	0/0:83,2:75:80.91:0,81,1036	1/1:22,0:20:5.85:51,6,0	./.	1/1:23,0:22:14.47:117,14,0	0/0:12,0:10:12.50:0,12,163	0/0:50,0:42:8.04:0,8,977	0/1:17,0:16:11.29:11,0,211	0/0:7,0:7:8.42:0,8,76
chr10	96026271	.	G	GTC	875.79	PASS	AB=0.992;AC=8;AF=0.148;AN=54;BaseQRankSum=2.379;DP=739;FS=2.273;HRun=0;HaplotypeScore=241.3389;InbreedingCoeff=0.5445;MQ=39.14;MQ0=56;MQRankSum=-2.484;QD=6.39;ReadPosRankSum=1.643;VQSLOD=3.2835;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,10:32:31.04:554,31,0	0/0:9,0:8:23.50:0,23,270	1/1:12,0:1:2.04:6,2,0	./.	0/0:18,0:18:23.93:0,24,313	0/0:23,0:20:14.99:0,15,94	0/0:37,0:29:32.14:0,32,277	0/1:60,0:24:49.83:147,0,50	0/0:31,0:31:42.46:0,42,530	0/0:35,0:30:51.67:0,52,419	0/0:14,0:13:12.17:0,12,82	0/0:14,0:12:13.54:0,14,83	0/0:10,0:8:16.76:0,17,107	0/0:15,0:13:9.86:0,10,110	0/0:22,0:21:27.04:0,27,328	1/1:5,16:18:17.62:284,18,0	0/0:37,0:36:69.59:0,70,1131	0/0:33,0:32:78.06:0,78,971	0/0:30,0:15:41.84:0,42,419	0/0:16,0:16:18.06:0,18,270	0/0:90,0:79:99:0,112,1472	0/0:20,0:18:5.86:0,6,40	0/0:9,0:9:3:0,3,25	0/0:24,0:23:23.53:0,24,163	0/0:15,0:13:21.03:0,21,254	0/0:51,0:45:89.51:0,90,1224	0/0:19,0:18:32.98:0,33,349	0/1:9,0:9:22.32:22,0,61
chr10	96026275	.	GTC	G	1286.06	PASS	AB=0.995;AC=24;AF=0.462;AN=52;BaseQRankSum=5.590;DP=731;FS=2.707;HRun=0;HaplotypeScore=231.4391;InbreedingCoeff=0.5106;MQ=39.52;MQ0=55;MQRankSum=-4.412;QD=3.61;ReadPosRankSum=-2.537;VQSLOD=1.9970;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,1:29:4.28:52,4,0	0/1:9,0:8:0.92:1,0,229	0/0:19,0:1:3.01:0,3,32	./.	0/0:18,0:18:11.98:0,12,306	0/1:23,0:21:6.26:54,0,6	0/1:34,1:27:47.09:126,0,47	1/1:58,0:24:44.91:295,45,0	0/0:32,0:31:31.99:0,32,655	1/1:36,0:32:35:425,35,0	1/1:13,0:12:7.75:38,8,0	0/1:14,0:12:9.54:19,0,10	1/1:9,0:7:11.67:69,12,0	1/1:17,0:15:14.57:57,15,0	0/0:21,0:20:30.03:0,30,401	1/1:20,0:18:7.33:48,7,0	0/1:37,0:36:23.48:23,0,922	0/0:32,1:32:23.85:0,24,656	0/0:31,0:15:44.70:0,45,490	0/0:14,0:14:18.06:0,18,327	0/0:86,5:82:99:0,104,1755	1/1:20,0:18:8.84:74,9,0	./.	1/1:24,0:23:14.71:135,15,0	0/0:15,0:13:21:0,21,283	0/0:50,2:47:35.42:0,35,1470	0/0:17,0:17:21.39:0,21,328	0/1:9,0:9:6.40:56,0,6
chr10	96026277	.	CTGTGTGTGTGTGTG	C	1531.63	PASS	AB=0.927;AC=19;AF=0.352;AN=54;BaseQRankSum=1.619;DP=738;FS=14.261;HRun=0;HaplotypeScore=325.6017;InbreedingCoeff=0.4161;MQ=39.84;MQ0=53;MQRankSum=-4.365;QD=5.41;ReadPosRankSum=-5.833;VQSLOD=0.4124;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:38.36:0,38,1087	0/0:9,0:8:8.53:0,9,374	0/0:20,0:2:6.02:0,6,84	./.	0/0:18,0:18:24.27:0,24,526	1/1:24,1:23:8.44:64,8,0	0/1:35,0:27:11.12:105,0,11	0/1:58,0:25:26.47:325,0,26	0/0:32,0:31:37.57:0,38,981	0/1:32,3:32:25.13:697,0,25	1/1:12,0:11:4.93:28,5,0	1/1:11,3:12:12.50:106,13,0	1/1:10,0:8:6.42:50,6,0	0/1:14,2:15:5.09:34,0,5	0/0:23,0:22:12.77:0,13,446	0/1:16,0:16:22.22:22,0,259	0/0:35,0:36:74.13:0,74,3248	0/0:30,0:32:65.97:0,66,1896	0/0:34,0:17:35.63:0,36,512	0/0:14,0:14:18.04:0,18,626	0/0:96,0:86:69.98:0,70,1789	1/1:17,2:17:9.03:60,9,0	0/1:5,2:7:0.25:0,0,0	1/1:25,0:24:15.26:121,15,0	0/0:14,0:12:20.13:0,20,286	0/0:52,0:47:64.35:0,64,2411	0/0:17,0:17:20.66:0,21,597	0/1:9,0:9:93.90:94,0,226
chr10	96026283	.	G	GTC	73.60	PASS	AB=0.985;AC=9;AF=0.161;AN=56;BaseQRankSum=6.309;DP=758;FS=5.622;HRun=0;HaplotypeScore=226.3928;InbreedingCoeff=0.0036;MQ=40.14;MQ0=46;MQRankSum=1.033;QD=0.40;ReadPosRankSum=-0.069;VQSLOD=2.2698;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:31:30.15:44,0,30	0/0:10,0:9:23.96:0,24,309	0/0:28,0:3:9.01:0,9,104	0/0:27,0:2:3:0,3,25	0/0:18,0:18:23.98:0,24,345	0/0:23,0:20:0.34:0,0,139	0/1:36,0:29:37.34:37,0,335	0/0:59,0:28:38.91:0,39,292	0/0:32,0:31:48.09:0,48,683	0/1:34,0:31:7.66:8,0,517	0/0:11,0:10:9.49:0,9,107	0/1:15,1:14:42.59:43,0,107	0/1:10,0:8:9.87:10,0,42	0/1:15,0:14:9.56:10,0,92	0/0:24,0:23:33.08:0,33,480	1/1:20,0:18:9.22:43,9,0	0/0:38,0:37:63.79:0,64,1132	0/0:31,0:30:80.37:0,80,848	0/0:29,0:18:50.94:0,51,646	0/0:17,0:17:18.06:0,18,271	0/0:103,0:94:99:0,135,1894	0/1:19,1:18:14.73:15,0,55	0/0:8,0:8:3.01:0,3,45	0/0:22,2:23:18.55:0,19,347	0/0:15,0:13:21.07:0,21,320	0/0:51,0:47:99:0,106,1520	0/0:17,0:17:29.98:0,30,380	0/0:9,0:9:23.70:0,24,236
chr10	96026291	.	G	GTC	1960.06	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=-0.727;DP=747;FS=7.172;HRun=0;HaplotypeScore=197.2015;InbreedingCoeff=0.4506;MQ=42.86;MQ0=40;MQRankSum=-0.572;QD=4.22;ReadPosRankSum=-4.728;VQSLOD=0.7473;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:28:14.51:490,15,0	0/1:12,0:11:6.69:7,0,103	0/0:35,0:5:12:0,12,128	0/0:33,0:6:11.36:0,11,88	0/0:22,0:22:12.39:0,12,95	1/1:14,0:13:4.88:30,5,0	1/1:33,0:26:1.22:95,1,0	1/1:55,0:31:16.21:486,16,0	0/0:32,0:31:12.98:0,13,186	0/1:35,0:32:29.52:226,0,30	1/1:9,0:8:5.35:29,5,0	1/1:12,1:12:14.86:121,15,0	1/1:10,0:8:1.35:3,1,0	0/0:11,0:10:1.01:0,1,3	0/0:27,0:26:11.95:0,12,112	1/1:22,0:20:1.81:266,2,0	0/0:37,0:36:84.91:0,85,1090	0/0:27,0:26:50.41:0,50,651	0/0:28,0:14:22.23:0,22,134	0/1:15,0:15:4.92:5,0,72	0/1:107,0:98:99:128,0,369	1/1:18,1:16:4.79:26,5,0	0/1:7,0:7:0:0,0,0	1/1:18,2:19:12.36:71,12,0	0/0:15,0:14:19.46:0,19,92	0/1:53,0:49:40.76:41,0,353	0/0:14,0:14:14.07:0,14,111	1/1:11,0:11:14.46:117,14,0
chr10	96026362	.	AGT	A	9425.66	PASS	AB=0.961;AC=42;AF=0.750;AN=56;BaseQRankSum=1.113;DP=768;FS=4.563;HRun=0;HaplotypeScore=116.4876;InbreedingCoeff=0.8036;MQ=50.15;MQ0=28;MQRankSum=5.549;QD=16.20;ReadPosRankSum=3.210;VQSLOD=4.6459;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:29.93:0,30,460	1/1:1,8:9:6.02:76,6,0	0/0:47,0:14:18.02:0,18,227	0/1:42,0:17:0.70:1,0,292	1/1:3,13:16:18.06:227,18,0	1/1:10,12:22:21.05:249,21,0	1/1:11,6:17:21.07:264,21,0	0/0:37,0:32:44.67:0,45,575	1/1:9,10:17:5.09:141,5,0	1/1:26,24:47:99:1302,111,0	1/1:5,9:14:12.04:151,12,0	1/1:9,10:18:35.97:388,36,0	1/1:1,15:14:21.07:259,21,0	1/1:3,17:19:21.07:265,21,0	1/1:6,22:28:15.05:189,15,0	0/0:23,1:24:44.84:0,45,559	0/0:30,0:30:68.12:0,68,1125	0/1:16,1:17:20.61:21,0,480	1/1:10,12:15:24.05:286,24,0	1/1:1,18:19:24.08:303,24,0	1/1:48,45:90:99:2371,177,0	1/1:10,11:18:27.08:335,27,0	1/1:3,14:16:18.06:227,18,0	1/1:20,25:44:62.50:775,62,0	1/1:4,20:23:27.09:341,27,0	1/1:21,18:35:75.20:1027,75,0	1/1:2,10:11:18.06:227,18,0	0/0:14,0:14:35.06:0,35,371
chr10	96026373	.	GTGTC	G	1345.55	PASS	AB=0.964;AC=16;AF=0.286;AN=56;BaseQRankSum=10.876;DP=769;FS=0.783;HRun=0;HaplotypeScore=156.0110;InbreedingCoeff=0.5366;MQ=47.95;MQ0=31;MQRankSum=4.370;QD=4.84;ReadPosRankSum=2.533;VQSLOD=2.6403;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:39.05:0,39,861	0/0:8,0:8:5.75:0,6,30	0/0:54,0:14:38.94:0,39,563	0/0:46,0:17:18.77:0,19,598	0/0:15,0:15:19.96:0,20,109	1/1:20,0:20:19.35:94,19,0	0/1:15,0:14:36.03:114,0,36	0/0:31,0:25:66.92:0,67,1084	0/0:14,0:13:14.51:0,15,95	1/1:50,2:49:14.78:543,15,0	1/1:10,0:10:11.10:50,11,0	1/1:22,1:21:0.14:172,0,0	0/1:16,0:15:0.17:73,0,0	0/1:19,1:19:0.14:67,0,0	0/0:24,0:24:17.37:0,17,101	0/0:26,0:26:54:0,54,966	0/0:25,0:25:54.32:0,54,1856	0/0:16,0:16:23.09:0,23,882	0/0:24,0:16:41.03:0,41,312	0/0:18,0:18:11.19:0,11,95	0/0:107,0:103:99:0,142,1214	0/1:20,3:20:7.81:73,0,8	0/1:16,1:16:2.35:58,0,2	1/1:41,0:40:15.26:251,15,0	0/0:20,0:19:25.88:0,26,137	0/1:41,0:37:25.68:26,0,351	0/0:11,0:10:20.26:0,20,125	0/0:14,0:14:18.35:0,18,583
chr10	96026457	.	C	CTG	920.49	PASS	AB=0.759;AC=7;AF=0.125;AN=56;BaseQRankSum=-1.584;DP=837;FS=0.000;HRun=0;HaplotypeScore=130.9180;InbreedingCoeff=0.6082;MQ=42.16;MQ0=59;MQRankSum=-3.719;QD=9.11;ReadPosRankSum=-0.579;VQSLOD=3.2895;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,9:38:3.25:352,3,0	0/0:15,0:15:24.07:0,24,294	0/0:41,0:4:5.85:0,6,52	0/0:44,0:4:3:0,3,29	0/0:24,0:23:38.95:0,39,476	0/0:21,0:20:16.50:0,17,226	0/0:30,0:25:19.57:0,20,204	0/1:28,13:22:8.32:335,0,8	0/0:28,0:28:45:0,45,524	0/0:42,0:32:43.48:0,43,648	0/0:19,0:16:12.04:0,12,153	0/0:21,0:18:17.31:0,17,189	0/0:11,0:9:9.01:0,9,93	0/0:15,0:13:12.02:0,12,152	0/0:28,0:28:51.13:0,51,622	1/1:10,1:11:5.23:61,5,0	0/0:29,0:28:43.45:0,43,652	0/0:29,0:27:57.92:0,58,755	0/0:30,0:21:45.04:0,45,507	0/0:19,0:18:24.07:0,24,295	0/0:133,0:125:99:0,222,2775	0/0:23,0:19:23.96:0,24,272	0/0:12,0:10:3.01:0,3,38	0/0:35,0:33:24.08:0,24,299	0/0:23,0:23:53.93:0,54,623	0/0:46,0:43:93.90:0,94,1164	0/0:15,0:15:24.07:0,24,290	1/1:0,7:7:18.06:301,18,0
chr10	96026459	.	GTGTGTGTGTC	G	960.71	PASS	AB=0.975;AC=17;AF=0.327;AN=52;BaseQRankSum=2.994;DP=847;FS=8.066;HRun=0;HaplotypeScore=197.2840;InbreedingCoeff=0.5900;MQ=41.90;MQ0=61;MQRankSum=-1.198;QD=4.04;ReadPosRankSum=1.320;VQSLOD=2.1144;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:37:21:0,21,299	0/0:15,0:15:17.85:0,18,596	0/0:40,0:4:3.01:0,3,40	./.	0/0:26,0:24:33.11:0,33,1071	1/1:20,0:19:12.04:214,12,0	1/1:30,1:26:8.37:82,8,0	0/0:43,0:23:8.21:0,8,359	0/0:27,0:27:32.93:0,33,1463	0/1:41,1:32:55.90:203,0,56	1/1:16,3:16:6.02:142,6,0	1/1:17,5:18:1.99:89,2,0	1/1:5,5:8:5.95:83,6,0	0/0:14,2:13:0.47:0,0,1	0/0:28,0:28:42.35:0,42,1290	1/1:11,0:11:5.95:56,6,0	0/0:30,0:28:15.30:0,15,2058	0/0:29,0:27:65.71:0,66,2088	0/0:32,0:21:18.05:0,18,453	0/0:19,0:18:23.56:0,24,777	0/0:135,0:127:99:0,200,7336	1/1:20,4:20:12.04:219,12,0	./.	0/1:34,2:34:38.75:39,0,84	0/1:23,0:23:0.83:1,0,1127	0/0:46,0:43:52.44:0,52,2355	0/0:16,0:16:21.07:0,21,687	0/0:7,0:7:18.06:0,18,494
chr10	96026461	.	GTGTGTGTC	G	484.27	PASS	AB=0.994;AC=10;AF=0.179;AN=56;BaseQRankSum=5.097;DP=851;FS=0.725;HRun=0;HaplotypeScore=181.1442;InbreedingCoeff=-0.0769;MQ=41.48;MQ0=61;MQRankSum=-0.632;QD=2.06;ReadPosRankSum=0.339;VQSLOD=2.3615;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:38,2:36:36.60:92,0,37	0/0:16,0:15:24.08:0,24,739	0/0:38,0:3:6.02:0,6,92	0/0:42,0:2:3:0,3,29	0/0:27,0:25:45.15:0,45,1467	0/1:19,0:18:48.70:49,0,63	0/0:33,0:27:5.82:0,6,125	0/1:49,0:25:99:161,0,371	0/0:27,0:27:45.14:0,45,1622	0/1:42,0:32:32.67:33,0,619	0/1:17,0:14:53.26:53,0,64	0/1:24,0:19:54.72:55,0,114	0/1:10,0:8:32.88:33,0,46	0/0:16,0:13:12.51:0,13,153	0/0:28,0:28:55.07:0,55,1642	1/1:8,2:10:5.33:104,5,0	0/0:30,0:28:35.03:0,35,2166	0/0:29,0:27:77.67:0,78,2391	0/0:33,0:21:45.08:0,45,872	0/0:19,0:18:30.10:0,30,983	0/0:137,0:127:99:0,260,8608	0/1:24,0:20:47.35:47,0,95	0/0:13,0:11:3.01:0,3,38	0/0:35,0:33:26.74:0,27,326	0/0:22,0:22:53.52:0,54,1445	0/0:48,0:45:99:0,110,3164	0/0:16,0:16:24.08:0,24,852	0/0:7,0:7:4.07:0,4,210
chr10	96026469	.	CTG	C	67.65	PASS	AB=0.988;AC=8;AF=0.148;AN=54;BaseQRankSum=7.264;DP=864;FS=23.047;HRun=0;HaplotypeScore=133.0493;InbreedingCoeff=0.0357;MQ=41.21;MQ0=74;MQRankSum=-5.908;QD=0.35;ReadPosRankSum=1.177;VQSLOD=1.2720;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:38:24.85:0,25,347	0/1:15,0:14:5.33:5,0,286	0/0:29,0:3:8.70:0,9,81	./.	0/0:27,0:23:45.15:0,45,747	0/0:22,0:20:15.04:0,15,111	0/1:36,0:28:9.32:9,0,125	0/0:50,1:21:41.69:0,42,562	0/0:28,0:28:18.74:0,19,696	0/1:53,0:38:9.39:9,0,430	0/0:20,0:15:11.76:0,12,100	0/1:24,0:19:29.52:30,0,38	0/0:14,0:10:3.33:0,3,21	0/0:13,0:10:9.03:0,9,141	0/0:29,0:29:28.68:0,29,816	1/1:9,0:9:5.74:31,6,0	0/0:30,1:29:44.72:0,45,1012	0/1:30,1:29:9.88:10,0,1003	0/0:38,0:18:36.03:0,36,504	0/0:21,0:20:7.60:0,8,485	0/0:130,1:121:99:0,240,3987	0/0:25,0:19:14.60:0,15,124	0/0:14,0:12:3.01:0,3,47	0/0:31,3:33:16.22:0,16,145	0/1:23,1:24:97.16:97,0,515	0/0:49,0:44:92.87:0,93,1615	0/0:14,0:14:20.93:0,21,359	0/0:7,0:7:18.06:0,18,297
chr10	96026477	.	GTC	G	345.79	PASS	AB=0.915;AC=13;AF=0.241;AN=54;BaseQRankSum=9.254;DP=836;FS=18.349;HRun=0;HaplotypeScore=127.7484;InbreedingCoeff=-0.2288;MQ=41.26;MQ0=77;MQRankSum=-3.640;QD=1.13;ReadPosRankSum=-0.823;VQSLOD=1.0056;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,5:37:31.20:0,31,499	0/1:12,2:13:24.32:24,0,293	0/0:21,0:3:8.55:0,9,85	./.	0/0:29,1:25:48.12:0,48,811	0/1:22,2:22:27.76:28,0,72	0/1:32,2:25:19.85:40,0,20	0/0:51,0:21:56.88:0,57,744	0/0:23,3:26:2.51:0,3,780	0/1:46,3:34:37.33:37,0,355	0/1:18,3:15:4.34:4,0,62	0/1:18,4:17:31.79:79,0,32	0/1:17,0:12:7.24:7,0,64	0/0:8,3:8:11.99:0,12,123	0/0:23,4:27:10.36:0,10,813	0/1:6,3:9:0.29:31,0,0	0/0:33,1:32:31.95:0,32,1131	0/1:28,2:28:32.39:32,0,1149	0/0:34,0:15:32.02:0,32,452	0/1:21,1:21:12.35:12,0,535	0/0:119,5:113:99:0,223,4326	0/1:26,0:20:45.07:45,0,83	0/1:15,0:13:2.03:2,0,20	0/0:34,0:32:10.98:0,11,72	0/1:18,4:22:99:145,0,577	0/0:50,0:44:32.05:0,32,1766	0/0:15,0:15:26.91:0,27,446	0/0:7,0:7:18.06:0,18,333
chr10	96026479	.	CTG	C	519.81	PASS	AB=0.967;AC=11;AF=0.204;AN=54;BaseQRankSum=5.958;DP=835;FS=21.081;HRun=0;HaplotypeScore=126.4021;InbreedingCoeff=-0.0460;MQ=41.28;MQ0=79;MQRankSum=-1.562;QD=2.03;ReadPosRankSum=-1.790;VQSLOD=0.5726;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:37:36.06:0,36,460	0/1:13,0:13:8.34:8,0,242	0/0:20,0:3:3.01:0,3,52	./.	0/0:28,0:24:39.13:0,39,670	0/1:17,5:20:99:123,0,119	1/1:33,1:25:8.20:75,8,0	0/0:52,0:23:57.05:0,57,796	0/0:26,0:26:22.22:0,22,737	0/1:51,2:37:89.71:90,0,443	0/1:20,1:15:56.15:56,0,82	0/1:21,0:16:62.76:83,0,63	0/0:17,0:12:5.74:0,6,190	0/0:10,0:7:3.01:0,3,52	0/0:27,0:27:18.62:0,19,640	0/1:10,0:10:3.10:13,0,3	0/0:35,0:33:67.45:0,67,1148	0/0:30,0:28:27.95:0,28,1070	0/0:37,0:16:30.07:0,30,404	0/0:23,0:22:10.59:0,11,509	0/0:121,0:110:99:0,227,3842	0/1:25,0:19:99:128,0,168	0/0:15,0:13:2.92:0,3,17	0/1:33,1:32:29.72:30,0,144	0/1:22,0:22:57.63:58,0,529	0/0:49,1:44:40.36:0,40,1657	0/0:15,0:15:26.95:0,27,450	0/0:7,0:7:18.06:0,18,296
chr10	96026495	.	GTC	G	307.65	PASS	AB=0.938;AC=6;AF=0.111;AN=54;BaseQRankSum=7.009;DP=793;FS=0.000;HRun=0;HaplotypeScore=122.9756;InbreedingCoeff=0.1433;MQ=42.07;MQ0=75;MQRankSum=2.106;QD=2.56;ReadPosRankSum=-3.755;VQSLOD=1.2405;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,14:37:43.84:284,0,44	0/0:12,0:11:20.99:0,21,306	0/0:4,0:1:2.99:0,3,23	./.	0/0:30,0:25:45.05:0,45,791	0/0:22,0:21:5.55:0,6,404	0/0:31,0:23:8.38:0,8,90	0/0:55,0:24:60.46:0,60,927	0/0:26,0:26:53.59:0,54,912	0/0:47,0:31:58.59:0,59,1150	0/1:19,0:13:24.20:24,0,122	0/1:24,0:19:20.54:21,0,286	0/0:16,0:11:11.75:0,12,363	0/0:9,0:6:5.99:0,6,79	0/0:19,0:19:35.33:0,35,613	1/1:8,3:11:8.68:92,9,0	0/0:34,0:32:71.63:0,72,1331	0/0:31,0:29:82.22:0,82,1366	0/0:42,0:20:33.23:0,33,691	0/0:22,0:21:39.06:0,39,619	0/0:122,0:112:99:0,218,4000	0/1:24,0:19:5.74:6,0,360	0/0:16,0:13:3.01:0,3,57	0/0:32,0:30:18.06:0,18,335	0/0:22,0:20:44.92:0,45,661	0/0:49,0:43:99:0,104,1831	0/0:15,0:15:32.98:0,33,587	0/0:12,0:11:26.93:0,27,439
chr10	96026497	.	CTGTG	C	275.04	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=5.592;DP=802;FS=3.558;HRun=0;HaplotypeScore=141.9316;InbreedingCoeff=0.7986;MQ=42.07;MQ0=76;MQRankSum=2.601;QD=4.91;ReadPosRankSum=-1.180;VQSLOD=1.9167;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:43,2:40:24.11:294,24,0	0/0:11,0:11:18.02:0,18,341	./.	./.	0/0:30,0:25:42.14:0,42,919	0/0:20,0:20:19.29:0,19,589	0/0:30,0:25:9.54:0,10,137	0/0:58,0:26:54.14:0,54,1095	0/0:26,0:26:51.16:0,51,1144	0/0:50,0:31:69.13:0,69,1514	0/0:20,0:14:14.93:0,15,277	0/0:24,0:20:21.34:0,21,381	0/0:16,0:11:24.05:0,24,516	0/0:9,0:6:6.02:0,6,123	0/0:18,0:19:36.01:0,36,764	1/1:10,1:11:8.97:93,9,0	0/0:33,0:31:56.63:0,57,1667	0/0:31,0:29:76.71:0,77,1642	0/0:40,0:20:51.01:0,51,961	0/0:23,0:22:30.06:0,30,691	0/0:123,0:113:99:0,220,5101	0/0:24,0:19:26.12:0,26,527	0/0:15,0:12:3.01:0,3,78	0/0:31,2:31:18.06:0,18,451	0/0:24,0:22:36.57:0,37,777	0/0:49,0:43:99:0,102,2206	0/0:15,0:15:32.93:0,33,704	0/0:12,0:11:21.07:0,21,487
chr10	96026553	.	C	CTG	972.51	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.790;DP=779;FS=7.675;HRun=0;HaplotypeScore=127.8014;InbreedingCoeff=0.7865;MQ=44.87;MQ0=36;MQRankSum=-7.352;QD=13.89;ReadPosRankSum=-3.216;VQSLOD=2.0636;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:59:62.18:0,62,722	0/0:9,0:9:6.02:0,6,75	0/0:54,0:15:23.66:0,24,227	0/0:48,0:13:17.70:0,18,183	0/0:20,0:19:14.95:0,15,173	0/0:17,0:18:29.92:0,30,373	0/0:23,0:22:32.87:0,33,394	1/1:58,5:38:66.08:843,66,0	0/0:21,0:20:30.73:0,31,396	0/0:39,0:33:52.63:0,53,667	0/0:9,0:9:15.01:0,15,159	0/0:20,0:20:26.89:0,27,337	0/0:13,0:11:3.02:0,3,171	0/0:13,0:12:24.01:0,24,287	0/0:24,0:24:32.76:0,33,364	0/0:14,0:13:17.96:0,18,204	0/0:25,0:22:48.13:0,48,576	0/0:22,0:22:47.86:0,48,506	0/0:34,0:24:53.76:0,54,573	0/0:16,0:16:14.93:0,15,174	0/0:95,0:89:99:0,109,1537	0/0:22,0:21:26.82:0,27,312	0/0:15,0:14:5.93:0,6,74	0/0:31,0:30:36.11:0,36,449	0/0:12,0:12:18.06:0,18,225	0/0:36,0:32:67.54:0,68,734	0/0:10,0:10:15:0,15,171	1/1:5,2:6:15.05:247,15,0
chr10	96026585	.	CTCTGTG	C	1295.67	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=7.952;DP=683;FS=3.019;HRun=0;HaplotypeScore=144.8270;InbreedingCoeff=0.1288;MQ=43.59;MQ0=38;MQRankSum=-3.268;QD=3.86;ReadPosRankSum=-1.270;VQSLOD=2.3411;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:43,8:52:50.46:511,50,0	0/1:8,0:8:8.17:96,0,8	0/0:46,0:15:37.58:0,38,292	0/0:47,0:11:20:0,20,210	0/0:15,0:14:5.81:0,6,48	0/1:24,0:22:1.47:1,0,217	0/1:24,0:22:0.63:1,0,273	1/1:29,0:12:20.25:147,20,0	0/1:21,0:21:35.70:36,0,135	0/1:32,0:30:14.73:15,0,846	0/0:9,0:10:5.99:0,6,48	0/1:22,0:21:17.48:17,0,164	0/1:10,0:8:19.91:20,0,66	0/0:16,0:16:23.95:0,24,272	0/1:29,0:28:11.50:12,0,218	1/1:9,2:12:18.02:251,18,0	0/0:24,0:20:47.67:0,48,1115	0/0:16,0:15:10.20:0,10,542	0/1:26,0:15:38.33:38,0,214	0/0:14,0:13:11.75:0,12,99	0/0:83,0:76:93.55:0,94,823	0/0:20,0:17:10.06:0,10,329	0/0:10,0:9:2.97:0,3,24	0/0:28,0:25:32.78:0,33,407	0/0:15,0:15:17.98:0,18,150	0/1:23,0:18:99:212,0,217	0/1:14,0:14:20.53:21,0,53	1/1:6,0:5:11.95:92,12,0
chr10	96026587	.	CTGTGTG	C	1072.24	PASS	AB=0.799;AC=20;AF=0.385;AN=52;BaseQRankSum=0.491;DP=694;FS=1.923;HRun=0;HaplotypeScore=149.3254;InbreedingCoeff=0.4234;MQ=43.34;MQ0=38;MQRankSum=-2.551;QD=3.34;ReadPosRankSum=-0.921;VQSLOD=2.6395;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:56,0:54:11.03:133,11,0	1/1:4,3:8:12.02:188,12,0	0/0:48,0:15:3.01:0,3,44	0/0:50,0:11:3.48:0,3,45	0/1:6,9:14:0:0,0,0	0/0:23,0:21:5.51:0,6,76	0/0:26,0:25:7.35:0,7,136	0/0:30,0:11:3.48:0,3,30	1/1:13,7:21:5.75:100,6,0	0/0:33,0:31:46.27:0,46,763	./.	0/0:23,0:22:4.75:0,5,33	0/1:7,0:10:8.13:8,0,41	0/0:15,0:16:9.01:0,9,127	0/1:16,9:28:33.13:54,0,33	1/1:13,0:12:9.03:144,9,0	0/0:22,0:20:33.06:0,33,899	0/0:16,0:16:20.28:0,20,464	1/1:22,1:14:12.03:168,12,0	0/1:7,4:11:0.07:0,0,0	1/1:71,10:75:2.36:8,2,0	0/0:20,0:17:11.63:0,12,209	0/1:9,0:9:0.02:0,0,0	0/0:30,0:27:14.56:0,15,329	0/0:10,3:14:0:0,0,0	0/1:17,6:19:74.44:386,0,74	1/1:7,6:14:2.29:35,2,0	./.
chr10	96027058	.	A	ACC	4527.66	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-5.229;DP=453;FS=20.520;HRun=8;HaplotypeScore=59.1428;InbreedingCoeff=0.9649;MQ=78.74;MQ0=0;MQRankSum=-0.121;QD=20.86;ReadPosRankSum=-0.414;VQSLOD=1.8153;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:29:34.90:120,35,0	0/0:10,0:10:24.02:0,24,254	0/0:13,0:13:23.22:0,23,217	0/0:13,0:12:21.03:0,21,221	0/0:18,0:18:45.12:0,45,501	1/1:5,16:23:33.11:524,33,0	1/1:3,19:27:52.11:680,52,0	1/1:5,8:13:21.07:331,21,0	0/0:14,0:14:33.06:0,33,368	1/1:9,6:15:22.89:338,23,0	1/1:1,8:10:15.05:238,15,0	1/1:1,11:14:29.07:398,29,0	1/1:1,13:15:24.08:381,24,0	1/1:0,9:9:12.04:190,12,0	0/0:9,0:9:21.03:0,21,234	1/1:1,0:6:12.48:43,12,0	0/0:39,0:39:99:0,105,1171	0/0:12,0:12:36.10:0,36,401	0/0:18,0:18:36.07:0,36,401	0/0:11,0:11:24.04:0,24,267	0/0:31,0:31:87.21:0,87,959	1/1:2,7:9:18.02:258,18,0	1/1:1,5:7:5.51:57,6,0	1/1:3,27:33:53.67:818,54,0	0/0:15,0:15:39.10:0,39,434	0/0:16,0:17:44.85:0,45,480	0/0:16,0:16:39.07:0,39,425	1/1:0,3:7:11.53:151,12,0
chr10	96027269	.	C	CA	5085.51	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-9.921;DP=556;FS=2.124;HRun=7;HaplotypeScore=56.6049;InbreedingCoeff=0.9988;MQ=71.22;MQ0=0;MQRankSum=1.528;QD=28.89;ReadPosRankSum=0.708;VQSLOD=5.4430;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1159	0/0:11,0:11:33.05:0,33,319	0/0:20,0:20:45.05:0,45,428	0/0:19,0:18:34.92:0,35,391	0/0:21,0:21:63.10:0,63,608	1/1:3,16:18:39.12:471,39,0	1/1:5,6:11:24.03:271,24,0	0/0:28,0:28:69.09:0,69,661	0/0:12,0:12:33.05:0,33,319	1/1:2,24:24:66.20:797,66,0	1/1:4,12:16:39.12:469,39,0	1/1:1,16:17:48.15:580,48,0	1/1:1,14:15:42.13:507,42,0	1/1:2,8:10:21.06:254,21,0	0/0:12,0:12:30.05:0,30,290	0/0:16,0:16:45.07:0,45,435	0/0:28,0:27:75.08:0,75,711	0/0:20,0:20:54.08:0,54,521	0/0:18,0:17:42.06:0,42,406	0/0:22,0:22:63.10:0,63,608	0/0:34,0:34:93.15:0,93,898	1/1:3,15:18:42.13:504,42,0	1/1:3,12:15:33.10:399,33,0	1/1:3,26:29:69.21:833,69,0	0/0:10,0:10:30.05:0,30,290	0/0:23,0:23:60.09:0,60,579	0/0:26,0:26:72.11:0,72,694	0/0:15,0:15:42.07:0,42,406
chr10	96027358	.	GTT	G	4548.13	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=7.202;DP=564;FS=3.166;HRun=11;HaplotypeScore=75.4599;InbreedingCoeff=0.9872;MQ=64.47;MQ0=4;MQRankSum=0.555;QD=24.45;ReadPosRankSum=2.229;VQSLOD=4.9358;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:37:82.35:0,82,282	0/0:14,0:14:30.07:0,30,436	0/0:11,0:9:10.84:0,11,128	0/0:10,0:10:11.89:0,12,127	0/0:21,0:22:57.19:0,57,865	1/1:2,17:20:50.80:507,51,0	1/1:4,16:18:33.08:350,33,0	0/0:32,0:32:69.18:0,69,995	0/0:14,0:14:36.07:0,36,521	1/1:4,17:21:57.08:588,57,0	1/1:2,16:18:48.11:509,48,0	1/1:4,16:21:48.11:510,48,0	1/1:0,11:11:27.07:287,27,0	1/1:1,20:19:42.11:447,42,0	0/0:20,0:20:57.16:0,57,852	0/0:2,1:23:18.49:0,18,131	0/0:35,0:34:87.30:0,87,1328	0/0:18,0:18:45.15:0,45,685	0/0:25,0:25:57.02:0,57,790	0/0:19,0:22:60.03:0,60,788	0/0:15,0:15:39.06:0,39,548	1/1:5,10:14:33.05:350,33,0	1/1:4,9:13:32.80:331,33,0	1/1:6,20:22:63.16:668,63,0	0/0:11,0:10:30.10:0,30,456	0/0:27,1:29:52.33:0,52,1145	0/0:26,0:28:62.04:0,62,852	0/0:10,0:10:21.07:0,21,323
chr10	96027467	.	CATGTGG	C	3954.98	PASS	AB=0.559;AC=19;AF=0.365;AN=52;BaseQRankSum=10.707;DP=629;FS=4.482;HRun=0;HaplotypeScore=115.6756;InbreedingCoeff=0.8726;MQ=31.05;MQ0=109;MQRankSum=-3.789;QD=21.04;ReadPosRankSum=0.338;VQSLOD=2.6591;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:34:75.26:0,75,2598	0/0:15,0:13:39.13:0,39,1384	./.	./.	0/0:29,0:24:36.12:0,36,1267	1/1:3,11:11:6.02:153,6,0	0/1:4,15:13:99:144,0,103	0/0:27,0:21:60.10:0,60,1990	0/0:24,0:21:57.20:0,57,2141	1/1:5,19:14:27.05:634,27,0	1/1:2,20:17:21.07:536,21,0	1/1:6,12:6:15.05:383,15,0	1/1:2,22:18:26.76:689,27,0	1/1:2,18:14:15.05:383,15,0	0/0:25,0:20:39.13:0,39,1403	0/0:21,0:17:45.11:0,45,1684	0/0:50,0:31:60.16:0,60,2154	0/0:33,0:12:30.10:0,30,1126	0/0:21,0:18:48.10:0,48,1583	0/0:29,0:26:54.19:0,54,2020	0/0:31,0:24:59.87:0,60,2212	1/1:0,16:14:14.98:324,15,0	1/1:0,15:12:24.03:554,24,0	1/1:5,11:10:5.81:153,6,0	0/0:20,0:18:45.15:0,45,1645	0/0:26,0:17:50.76:0,51,1812	0/0:29,0:26:57.16:0,57,2046	0/0:17,0:11:29.99:0,30,1126
chr10	96028364	.	AGT	A	1219.79	PASS	AB=0.938;AC=19;AF=0.339;AN=56;BaseQRankSum=4.520;DP=329;FS=0.989;HRun=0;HaplotypeScore=62.3078;InbreedingCoeff=0.8279;MQ=69.96;MQ0=3;MQRankSum=-0.095;QD=9.68;ReadPosRankSum=7.113;VQSLOD=2.9817;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:21.93:0,22,144	1/1:6,0:6:16.18:73,16,0	0/0:24,0:13:26.12:0,26,433	0/0:23,0:13:29.88:0,30,405	1/1:8,0:8:19.76:109,20,0	0/0:13,0:13:30.09:0,30,475	0/0:20,0:20:54.15:0,54,802	0/0:6,0:6:15.49:0,15,187	1/1:12,0:12:32.92:155,33,0	0/0:11,0:11:27.08:0,27,398	0/0:5,0:5:15.05:0,15,242	0/0:11,0:11:30.06:0,30,414	0/0:9,0:9:24.07:0,24,379	0/0:7,0:7:21:0,21,302	1/1:14,0:14:17.23:116,17,0	0/0:5,0:5:11.59:0,12,69	0/0:17,0:17:41.63:0,42,631	0/0:11,0:11:28.23:0,28,392	1/1:9,1:10:17.75:104,18,0	1/1:13,1:14:12.13:216,12,0	0/1:28,2:29:99:189,0,102	0/0:6,0:6:18.05:0,18,276	0/0:4,0:4:12.04:0,12,196	0/0:20,0:20:45.05:0,45,596	1/1:9,0:9:2.67:123,3,0	1/1:10,2:12:32.87:210,33,0	1/1:11,0:11:8.58:127,9,0	0/0:2,0:2:3.01:0,3,48
chr10	96028366	.	TGG	T	3531.27	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-6.025;DP=334;FS=1.595;HRun=9;HaplotypeScore=56.6297;InbreedingCoeff=0.9093;MQ=72.28;MQ0=1;MQRankSum=0.334;QD=28.71;ReadPosRankSum=6.034;VQSLOD=3.3946;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:11:20.84:0,21,101	1/1:0,6:6:18.05:210,18,0	0/0:24,0:15:33.09:0,33,476	0/0:20,0:11:21.06:0,21,279	1/1:1,7:8:21.06:242,21,0	0/0:14,0:14:27.07:0,27,307	0/0:20,0:20:46.93:0,47,491	0/0:4,0:4:6.49:0,6,100	1/1:0,12:12:36.11:419,36,0	0/0:11,0:11:21.04:0,21,235	0/0:5,0:5:15.01:0,15,153	0/0:11,0:11:8.26:0,8,236	0/0:9,0:9:1.38:0,1,224	0/0:8,0:8:18.05:0,18,220	1/1:1,13:14:36.11:419,36,0	0/0:1,0:5:7.49:0,7,26	0/0:24,0:24:53.64:0,54,735	0/0:13,0:13:35.55:0,36,453	1/1:2,7:9:24.06:268,24,0	1/1:3,10:13:36.10:418,36,0	1/1:10,20:29:51.12:588,51,0	0/0:5,0:5:15.03:0,15,161	0/0:4,0:4:12.03:0,12,140	0/0:20,0:20:33.01:0,33,318	1/1:1,7:8:24.06:271,24,0	1/1:3,9:12:33.09:382,33,0	1/1:1,10:11:27.08:314,27,0	0/0:3,0:3:9.01:0,9,100
chr10	96028548	.	TTGTC	T	3682.80	PASS	AC=24;AF=0.480;AN=50;BaseQRankSum=5.064;DP=645;FS=2.006;HRun=0;HaplotypeScore=139.0551;InbreedingCoeff=0.8238;MQ=65.25;MQ0=8;MQRankSum=3.414;QD=13.85;ReadPosRankSum=1.216;VQSLOD=3.2636;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:31:1.55:5,2,0	./.	./.	./.	1/1:13,8:20:18.02:252,18,0	0/0:18,0:27:12.04:0,12,174	0/0:24,0:27:14.55:0,15,293	0/0:42,0:40:17.42:0,17,278	1/1:14,18:32:48.16:744,48,0	0/0:37,0:38:54.17:0,54,966	1/1:26,0:26:0.95:2,1,0	0/0:16,0:22:9.01:0,9,120	0/0:21,0:21:11.99:0,12,184	0/0:20,0:23:9.01:0,9,140	1/1:5,5:10:12.04:186,12,0	1/1:5,0:17:18.01:164,18,0	0/0:16,0:16:24.55:0,25,565	0/0:21,0:20:35.61:0,36,778	1/1:17,4:21:15.05:232,15,0	1/1:4,5:9:9.03:139,9,0	1/1:29,21:50:51.17:790,51,0	0/0:26,0:26:9:0,9,157	0/0:21,0:21:5.95:0,6,131	0/0:24,0:27:5.84:0,6,85	1/1:4,6:10:15.05:232,15,0	1/1:6,13:19:39.11:563,39,0	1/1:12,8:19:24.08:372,24,0	0/0:9,0:9:2.99:0,3,24
chr10	96028895	.	CGTGTGTGT	C	2396.36	PASS	AB=0.952;AC=34;AF=0.680;AN=50;BaseQRankSum=6.360;DP=566;FS=0.761;HRun=0;HaplotypeScore=143.8711;InbreedingCoeff=0.3475;MQ=54.89;MQ0=17;MQRankSum=-4.788;QD=6.55;ReadPosRankSum=0.409;VQSLOD=2.2857;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:30:3.01:56,3,0	./.	./.	0/0:22,0:9:2.98:0,3,21	0/0:14,0:14:1.83:0,2,22	1/1:11,13:24:18.06:432,18,0	1/1:21,9:29:6.49:151,6,0	0/0:13,0:12:9:0,9,91	1/1:18,0:16:10.58:265,11,0	1/1:21,8:29:23.12:338,23,0	1/1:10,0:10:3:25,3,0	1/1:14,7:22:6.99:203,7,0	1/1:14,9:23:10.61:292,11,0	1/1:12,9:21:8.90:226,9,0	0/1:18,0:18:13.35:13,0,42	1/1:7,0:14:15.05:280,15,0	0/0:25,0:32:51.17:0,51,1694	0/0:16,0:25:21.05:0,21,510	1/1:13,0:13:0.78:22,1,0	./.	0/0:51,0:50:3.01:0,3,49	1/1:3,5:8:0.47:1,0,0	0/1:13,2:16:0:0,0,0	1/1:17,7:24:2.80:13,3,0	1/1:19,0:18:2.84:68,3,0	0/1:25,0:24:87.06:87,0,134	0/1:15,0:15:34.24:43,0,34	1/1:3,0:3:3.01:32,3,0
chr10	96028931	.	TGTGTGTGC	T	2785.99	PASS	AB=0.997;AC=26;AF=0.500;AN=52;BaseQRankSum=4.614;DP=471;FS=3.238;HRun=0;HaplotypeScore=126.8717;InbreedingCoeff=0.1042;MQ=54.03;MQ0=19;MQRankSum=-3.410;QD=9.32;ReadPosRankSum=4.254;VQSLOD=2.4015;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:25:16.59:17,0,131	1/1:3,0:3:1.15:3,1,0	0/0:3,0:1:2.90:0,3,16	./.	1/1:14,0:14:3.82:17,4,0	0/1:18,0:18:51.09:311,0,51	0/1:24,0:22:97.56:98,0,122	0/1:15,0:12:3.97:166,0,4	1/1:18,6:22:41.40:563,41,0	0/1:21,0:21:99:155,0,177	0/0:8,0:8:2.82:0,3,23	0/1:20,0:20:99:135,0,191	0/1:17,0:16:61.16:210,0,61	0/1:16,0:16:99:145,0,107	0/1:14,0:14:12.95:66,0,13	1/1:7,0:7:15.05:202,15,0	0/0:37,0:37:96.33:0,96,2164	0/0:22,0:20:35.94:0,36,631	1/1:7,0:6:14.74:115,15,0	./.	0/0:45,0:44:2.99:0,3,24	0/0:10,0:10:11.28:0,11,86	0/0:9,0:8:8.76:0,9,53	0/0:24,0:24:8.14:0,8,167	1/1:3,19:20:5.77:103,6,0	0/1:28,1:28:0.63:439,0,1	1/1:16,1:16:9.40:119,9,0	1/1:3,0:3:8.60:88,9,0
chr10	96028933	.	TGTGTGC	T	2465.03	PASS	AB=1.000;AC=28;AF=0.560;AN=50;BaseQRankSum=3.131;DP=473;FS=2.376;HRun=0;HaplotypeScore=124.2070;InbreedingCoeff=0.2264;MQ=54.39;MQ0=19;MQRankSum=-3.312;QD=8.47;ReadPosRankSum=4.554;VQSLOD=2.3304;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:31:14.61:0,15,248	1/1:3,0:3:9:95,9,0	0/0:3,0:1:2.90:0,3,16	./.	1/1:3,9:12:1.83:4,2,0	0/1:18,0:18:45.04:132,0,45	0/1:25,0:23:28.74:29,0,139	1/1:13,0:10:18.45:162,18,0	1/1:23,0:22:38.96:431,39,0	0/1:20,0:20:32.15:32,0,210	0/0:6,0:6:2.99:0,3,23	0/1:20,0:20:55.42:55,0,188	0/1:18,0:17:74.95:75,0,77	0/1:16,0:16:45.85:46,0,107	1/1:1,12:13:6.02:144,6,0	0/1:9,0:9:2:136,0,2	0/0:38,0:38:99:0,99,1701	0/0:22,0:20:38.89:0,39,507	1/1:1,7:7:17.74:184,18,0	./.	./.	0/0:10,0:10:11.46:0,11,86	0/0:10,0:9:11.39:0,11,94	0/1:25,0:25:15.43:15,0,170	1/1:22,0:20:5.87:78,6,0	1/1:4,23:26:39.14:840,39,0	1/1:3,11:13:5.84:83,6,0	1/1:4,0:4:11.59:94,12,0
chr10	96029417	.	CG	C	2852.42	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=4.212;DP=404;FS=10.638;HRun=2;HaplotypeScore=52.6610;InbreedingCoeff=0.9439;MQ=50.68;MQ0=5;MQRankSum=0.277;QD=17.83;ReadPosRankSum=5.175;VQSLOD=2.6893;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:41.82:0,42,396	0/0:6,0:6:17.96:0,18,179	0/0:6,0:2:5.91:0,6,39	./.	0/0:18,0:17:30.86:0,31,341	1/1:5,14:19:35.97:389,36,0	1/1:3,11:14:26.96:300,27,0	0/0:13,0:13:26.63:0,27,218	0/0:12,0:12:26.42:0,26,256	1/1:3,11:14:26.75:238,27,0	1/1:5,7:12:35.84:354,36,0	1/1:4,10:14:23.80:259,24,0	1/1:2,9:11:1.42:131,1,0	1/1:1,15:16:24.05:285,24,0	0/0:11,0:11:21.92:0,22,219	0/0:9,0:9:26.88:0,27,256	0/0:34,0:34:71.38:0,71,893	0/0:21,0:21:43.91:0,44,597	0/0:15,0:15:25.27:0,25,361	0/0:8,0:8:19.65:0,20,162	0/0:18,0:17:33.30:0,33,280	1/1:3,12:15:23.96:250,24,0	1/1:13,5:19:37.82:334,38,0	1/1:4,22:25:45.04:523,45,0	0/0:13,0:12:24.04:0,24,252	0/0:8,0:8:20.97:0,21,207	0/0:14,0:14:23.98:0,24,241	0/0:13,0:12:23.88:0,24,272
chr10	96029418	.	GGA	G	1144.72	PASS	AB=0.900;AC=13;AF=0.241;AN=54;BaseQRankSum=7.291;DP=441;FS=1.509;HRun=0;HaplotypeScore=66.0565;InbreedingCoeff=0.2561;MQ=52.17;MQ0=5;MQRankSum=1.161;QD=6.69;ReadPosRankSum=7.626;VQSLOD=2.5015;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:47.84:0,48,554	0/0:6,0:6:18:0,18,243	0/0:6,0:2:5.85:0,6,46	./.	0/0:22,0:21:58.30:0,58,607	0/1:17,3:21:5.43:207,0,5	1/1:11,0:11:20.47:87,20,0	0/0:13,0:13:28.69:0,29,311	0/0:15,0:15:29.88:0,30,354	0/1:14,1:16:52.40:126,0,52	1/1:12,2:14:7.33:184,7,0	0/1:12,2:14:28.10:118,0,28	0/1:12,0:12:14.78:15,0,50	0/1:18,0:19:41.91:67,0,42	0/0:12,0:12:24.03:0,24,310	0/0:11,0:11:27.07:0,27,372	0/0:37,0:37:98.26:0,98,1402	0/0:20,0:21:55.93:0,56,897	0/0:19,0:18:34.84:0,35,504	0/0:9,0:9:26.71:0,27,228	0/0:18,0:18:34.20:0,34,339	0/1:14,1:15:6.88:80,0,7	0/1:16,4:21:46.16:232,0,46	1/1:26,2:27:2.05:187,2,0	0/0:14,0:13:23.85:0,24,324	0/0:11,0:11:32.70:0,33,329	0/0:15,0:15:26.96:0,27,332	0/0:14,0:13:30.95:0,31,403
chr10	96029433	.	ACG	A	579.13	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.860;DP=480;FS=8.356;HRun=0;HaplotypeScore=77.4332;InbreedingCoeff=0.7562;MQ=66.80;MQ0=2;MQRankSum=-3.375;QD=21.45;ReadPosRankSum=-4.059;VQSLOD=1.9537;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:50.43:0,50,586	0/0:3,0:3:8.95:0,9,89	0/0:18,0:13:31.59:0,32,401	0/0:4,0:2:4.83:0,5,48	0/0:19,0:19:36.43:0,36,620	0/0:21,0:21:56.12:0,56,676	0/0:14,0:14:32.33:0,32,434	1/1:0,4:16:40.30:484,40,0	0/0:9,0:9:8.93:0,9,116	0/0:32,0:32:83.76:0,84,1108	0/0:13,0:13:34.03:0,34,366	0/0:15,0:15:17.66:0,18,378	0/0:9,0:9:0.42:0,0,237	0/0:20,0:20:43.50:0,44,571	0/0:15,0:15:27.07:0,27,330	0/0:11,0:11:23.93:0,24,240	0/0:36,0:36:97.03:0,97,1368	0/0:24,0:24:63.03:0,63,908	0/0:26,0:26:78.22:0,78,1041	0/0:10,0:10:30.08:0,30,364	0/0:15,0:15:10.26:0,10,142	0/0:18,0:18:22.88:0,23,364	0/0:19,0:19:30.41:0,30,522	0/0:25,0:24:60.01:0,60,704	0/0:12,0:12:20.86:0,21,265	0/0:16,0:16:48.06:0,48,631	0/0:19,0:19:17.78:0,18,190	1/1:0,11:11:15.05:212,15,0
chr10	96029438	.	AG	A	259.71	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.752;DP=477;FS=0.000;HRun=1;HaplotypeScore=69.4473;InbreedingCoeff=0.9261;MQ=73.49;MQ0=1;MQRankSum=-0.407;QD=8.66;ReadPosRankSum=-3.090;VQSLOD=-0.2842;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:66.10:0,66,932	0/0:3,0:3:9:0,9,116	0/0:19,0:15:42.13:0,42,640	0/0:7,0:6:11.51:0,12,156	0/0:18,0:18:48.15:0,48,738	0/0:20,0:20:57.19:0,57,906	0/0:12,0:12:36.12:0,36,574	1/1:13,3:16:29.34:222,29,0	0/0:9,0:9:12.02:0,12,164	0/0:31,0:31:87.27:0,87,1312	0/0:14,0:14:33.08:0,33,465	0/0:15,0:15:38.16:0,38,574	0/0:9,0:9:24.04:0,24,326	0/0:18,0:18:45.15:0,45,707	0/0:15,0:15:33.11:0,33,524	0/0:11,0:11:21.07:0,21,331	0/0:35,0:35:96.28:0,96,1469	0/0:26,0:26:69.20:0,69,1036	0/0:27,0:27:72.25:0,72,1138	0/0:11,0:11:33.10:0,33,495	0/0:15,0:15:17.79:0,18,254	0/0:14,0:14:24.08:0,24,383	0/0:21,0:21:48.15:0,48,740	0/0:21,0:20:57.19:0,57,887	0/0:12,0:12:21.07:0,21,333	0/0:17,0:17:48.16:0,48,759	0/0:16,0:16:21.05:0,21,311	1/1:12,2:14:23.18:158,23,0
chr10	96029577	.	T	TAGA	14948.46	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-13.116;DP=600;FS=8.897;HRun=0;HaplotypeScore=80.7881;InbreedingCoeff=0.9951;MQ=67.85;MQ0=0;MQRankSum=-6.786;QD=51.37;ReadPosRankSum=1.502;VQSLOD=7.1140;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,42:49:99:2641,120,0	0/0:9,0:9:24.08:0,24,386	0/0:20,0:20:54.17:0,54,824	0/0:25,0:25:57.15:0,57,816	0/0:17,0:17:45.15:0,45,723	1/1:3,19:22:51.18:1123,51,0	1/1:3,20:23:60.21:1309,60,0	1/1:7,19:26:60.21:1317,60,0	0/0:33,0:33:84.29:0,84,1331	1/1:1,15:17:51.16:1079,51,0	1/1:2,4:6:15.05:316,15,0	1/1:2,15:18:27.09:595,27,0	1/1:0,20:23:53.74:1188,54,0	1/1:5,21:26:57.20:1257,57,0	0/0:22,0:22:57.18:0,57,893	1/1:2,11:13:33.11:727,33,0	0/0:37,0:37:99:0,108,1702	0/0:19,0:19:54.18:0,54,863	0/0:15,0:15:42.14:0,42,675	0/0:11,0:11:33.11:0,33,530	0/0:47,0:47:99:0,135,2140	1/1:3,13:16:39.13:833,39,0	1/1:2,13:15:36.12:778,36,0	1/1:2,24:27:66.23:1456,66,0	0/0:11,0:11:30.10:0,30,482	0/0:17,0:17:48.12:0,48,743	0/0:26,0:26:72.24:0,72,1148	1/1:5,5:10:15.05:329,15,0
chr10	96030391	.	A	AAAAG	890.73	PASS	AB=0.913;AC=7;AF=0.125;AN=56;BaseQRankSum=-1.819;DP=541;FS=2.917;HRun=0;HaplotypeScore=101.8380;InbreedingCoeff=0.1344;MQ=52.73;MQ0=16;MQRankSum=1.502;QD=6.80;ReadPosRankSum=0.076;VQSLOD=1.7319;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:46,2:48:17.70:470,0,18	0/0:5,0:5:14.56:0,15,118	0/0:17,0:4:8.72:0,9,53	0/1:18,0:7:7.31:7,0,19	0/0:10,0:9:20.24:0,20,170	0/0:18,0:17:20.84:0,21,343	0/0:16,0:16:21.03:0,21,281	0/1:34,1:33:99:362,0,177	0/0:18,0:18:40.41:0,40,293	0/0:12,0:12:12.80:0,13,164	0/0:17,0:16:23.27:0,23,332	0/0:17,0:16:18.79:0,19,269	0/0:16,0:16:30.51:0,31,231	0/1:15,0:15:12.25:12,0,187	0/0:30,0:30:39.33:0,39,353	0/1:5,5:12:7.16:130,0,7	0/0:45,0:42:99:0,108,1173	0/0:21,0:20:44.50:0,44,470	0/0:33,0:30:73.59:0,74,610	0/0:13,0:13:29.35:0,29,275	0/0:5,0:4:8.93:0,9,93	0/0:16,0:14:20.85:0,21,252	0/0:16,0:15:17.77:0,18,189	0/0:21,0:21:29.66:0,30,310	0/0:12,0:12:31.29:0,31,193	0/0:26,0:24:64.49:0,64,466	0/0:26,0:25:27.90:0,28,219	1/1:3,0:2:3.01:32,3,0
chr10	96030392	.	A	AAAG	932.77	PASS	AB=0.778;AC=6;AF=0.107;AN=56;BaseQRankSum=-3.527;DP=538;FS=0.635;HRun=0;HaplotypeScore=92.3858;InbreedingCoeff=0.3650;MQ=53.89;MQ0=14;MQRankSum=-0.043;QD=9.52;ReadPosRankSum=2.768;VQSLOD=3.1134;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,29:49:7.46:674,0,7	0/0:5,0:5:14.29:0,14,112	0/0:17,0:4:6.64:0,7,61	0/0:20,0:9:1.47:0,1,27	0/0:10,0:9:19.88:0,20,164	0/0:18,0:17:35.64:0,36,343	0/0:16,0:16:21.02:0,21,249	0/1:35,0:33:99:178,0,226	0/0:18,0:18:41.22:0,41,287	0/0:11,0:11:22.84:0,23,201	0/0:17,0:16:10.42:0,10,368	0/0:17,0:16:38.23:0,38,319	0/0:16,0:16:37.45:0,37,283	0/0:16,0:16:20.36:0,20,206	0/0:29,0:29:40.04:0,40,353	1/1:10,2:12:0.31:160,0,0	0/0:42,0:39:99:0,109,1127	0/0:20,0:19:44.69:0,45,451	0/0:32,0:30:73.80:0,74,606	0/0:13,0:13:32.49:0,32,303	0/0:5,0:4:11.85:0,12,105	0/0:15,0:13:35.46:0,35,307	0/0:16,0:15:26.11:0,26,224	0/0:22,0:22:29.84:0,30,305	0/0:12,0:12:31.78:0,32,211	0/0:26,0:24:64.51:0,65,463	0/0:27,0:26:27.82:0,28,228	1/1:2,0:2:3.01:32,3,0
chr10	96031093	.	TTA	T	2087.35	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=0.773;DP=460;FS=24.646;HRun=0;HaplotypeScore=71.8493;InbreedingCoeff=0.9487;MQ=73.27;MQ0=12;MQRankSum=2.101;QD=16.44;ReadPosRankSum=1.182;VQSLOD=1.3811;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:47.14:0,47,412	0/0:3,0:3:5.92:0,6,40	0/0:34,0:16:35.10:0,35,339	0/0:52,0:22:47.49:0,47,406	0/0:8,0:8:23.81:0,24,175	1/1:19,1:20:41.63:349,42,0	1/1:13,0:13:35.93:294,36,0	0/0:33,0:33:89.46:0,89,754	0/0:20,0:19:50.82:0,51,461	1/1:1,19:20:40.84:434,41,0	1/1:9,0:9:11.98:99,12,0	1/1:7,0:7:17.92:142,18,0	1/1:11,1:12:29.87:238,30,0	1/1:12,1:13:34.28:255,34,0	0/0:18,0:18:44.92:0,45,390	0/0:28,0:28:54.79:0,55,388	0/0:19,0:16:34.28:0,34,245	0/0:14,0:14:16.89:0,17,172	0/0:11,0:11:29.82:0,30,238	0/0:5,0:5:8.81:0,9,58	0/0:17,0:16:38.89:0,39,328	1/1:16,0:16:36.82:297,37,0	1/1:8,0:8:19.16:127,19,0	1/1:9,0:9:8.96:69,9,0	0/0:4,0:4:8.99:0,9,75	0/0:18,0:18:53.15:0,53,436	0/0:12,0:12:28.95:0,29,205	0/0:13,0:11:26.92:0,27,275
chr10	96031095	.	ATCTCTCTC	A	626.81	PASS	AB=0.994;AC=9;AF=0.173;AN=52;BaseQRankSum=3.442;DP=484;FS=1.188;HRun=0;HaplotypeScore=124.0150;InbreedingCoeff=0.0959;MQ=71.32;MQ0=15;MQRankSum=-4.038;QD=3.23;ReadPosRankSum=-0.674;VQSLOD=2.4845;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,1:21:59.54:86,0,60	./.	0/1:34,0:16:0:0,0,0	0/1:52,0:22:0:0,0,0	0/0:8,0:8:0.47:0,0,1	0/1:21,0:21:26.33:38,0,26	0/0:13,0:13:5.98:0,6,47	0/0:35,0:35:14.74:0,15,105	0/0:22,0:21:17.90:0,18,250	0/0:24,0:24:10.32:0,10,69	0/0:10,0:10:3:0,3,25	0/0:8,0:8:3.46:0,3,24	0/1:13,0:13:5.16:5,0,12	0/1:13,0:13:39.83:53,0,40	0/0:19,0:19:15:0,15,188	1/1:16,12:28:21.07:520,21,0	0/0:14,0:18:5.99:0,6,49	0/0:9,0:15:6.01:0,6,89	0/0:12,0:12:3.44:0,3,21	0/0:1,0:5:5.88:0,6,36	0/0:18,0:16:13.78:0,14,101	0/0:16,0:16:2.99:0,3,24	0/1:11,0:11:14.79:46,0,15	0/0:9,0:9:3.46:0,3,25	./.	0/0:18,0:19:12.40:0,12,91	0/0:14,0:13:2.94:0,3,18	0/0:14,0:12:15.04:0,15,426
chr10	96031143	.	CTT	C	1894.53	PASS	AB=0.994;AC=28;AF=0.500;AN=56;BaseQRankSum=-1.945;DP=374;FS=4.680;HRun=3;HaplotypeScore=74.6091;InbreedingCoeff=0.3062;MQ=56.83;MQ0=23;MQRankSum=3.487;QD=7.80;ReadPosRankSum=1.871;VQSLOD=0.4218;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:24:41.76:42,0,230	0/0:1,0:1:2.96:0,3,19	0/1:15,0:6:19.49:19,0,21	0/0:22,0:13:4.13:0,4,98	0/1:9,0:7:27.82:35,0,28	1/1:15,0:15:31.48:258,31,0	1/1:19,0:19:38.59:317,39,0	0/0:23,0:18:44.20:0,44,353	0/1:14,0:13:68.10:72,0,68	1/1:12,0:11:30.78:242,31,0	1/1:3,6:9:5.99:49,6,0	1/1:14,0:13:32.80:253,33,0	1/1:8,0:8:20.66:144,21,0	1/1:12,0:12:24.31:184,24,0	0/1:14,0:14:10.88:11,0,35	0/0:25,0:25:33.61:0,34,296	0/1:19,1:18:0.67:1,0,189	0/0:20,0:16:23.35:0,23,205	0/0:13,0:11:2.23:0,2,120	0/0:6,0:6:4.20:0,4,22	0/1:14,0:11:11.15:37,0,11	1/1:10,0:10:17.58:149,18,0	1/1:5,5:9:2.04:19,2,0	1/1:15,0:14:23.70:192,24,0	0/0:4,0:4:8.90:0,9,60	0/1:7,0:6:28.18:55,0,28	0/0:4,0:3:3.85:0,4,22	0/0:13,0:11:12.82:0,13,254
chr10	96031350	.	G	GA	9314.09	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-15.096;DP=629;FS=3.621;HRun=1;HaplotypeScore=67.2302;InbreedingCoeff=0.9888;MQ=77.15;MQ0=2;MQRankSum=0.650;QD=39.47;ReadPosRankSum=2.750;VQSLOD=5.6821;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,1766	0/0:3,0:3:9.03:0,9,116	0/0:22,0:22:27.02:0,27,486	0/0:39,0:34:57.92:0,58,798	0/0:14,0:14:42.13:0,42,531	1/1:0,23:23:66.22:976,66,0	1/1:0,19:19:48.16:711,48,0	0/0:19,0:19:54.12:0,54,636	0/0:19,0:19:51.15:0,51,647	1/1:2,25:27:75.25:1110,75,0	1/1:1,18:19:51.17:754,51,0	1/1:0,24:24:63.21:932,63,0	1/1:0,20:20:57.19:843,57,0	1/1:0,20:20:51.17:753,51,0	0/0:23,0:23:63.19:0,63,802	0/0:25,0:25:75.22:0,75,945	0/0:32,0:32:93.25:0,93,1158	0/0:21,0:21:59.17:0,59,712	0/0:20,0:20:57.17:0,57,714	0/0:15,0:15:42.14:0,42,543	0/0:20,0:20:60.19:0,60,765	1/1:0,34:34:96.32:1417,96,0	1/1:1,19:20:51.05:755,51,0	1/1:0,30:30:72.24:1062,72,0	0/0:14,0:14:42.12:0,42,520	0/0:26,1:27:36.84:0,37,966	0/0:25,0:24:69.19:0,69,854	0/0:5,0:5:15.01:0,15,175
chr10	96032441	.	CTCAGGAATCAGGTGACTTCACCAGAACCT	C	19768.22	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=13.375;DP=582;FS=2.069;HRun=0;HaplotypeScore=331.7694;InbreedingCoeff=0.8894;MQ=43.90;MQ0=57;MQRankSum=-13.315;QD=88.65;ReadPosRankSum=5.734;VQSLOD=3.2182;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,16:23:36.12:2637,36,0	0/0:8,0:7:15.05:0,15,1444	0/0:21,0:1:3.01:0,3,293	0/0:20,0:2:6.02:0,6,607	0/0:24,0:20:48.16:0,48,4623	1/1:1,7:8:15.05:1164,15,0	1/1:11,8:16:12.04:931,12,0	1/1:20,0:12:5.98:69,6,0	0/0:28,0:27:75.72:0,76,8497	1/1:6,3:9:12.04:931,12,0	1/1:2,5:5:9.03:697,9,0	1/1:9,14:20:39.13:3026,39,0	1/1:8,14:17:36.12:2794,36,0	1/1:8,4:6:9.03:698,9,0	0/0:27,0:27:66.23:0,66,7821	1/1:11,5:16:12.04:931,12,0	0/0:41,0:41:99:0,108,12664	0/0:23,0:21:50.91:0,51,6062	0/0:22,0:17:51.18:0,51,4985	0/0:22,0:16:39.13:0,39,4525	0/0:43,0:41:99:0,100,11678	1/1:8,10:13:24.08:1860,24,0	1/1:7,7:11:18.53:1386,19,0	1/1:11,16:25:32.64:2411,33,0	0/0:16,0:15:30.10:0,30,2446	0/0:35,0:29:78.27:0,78,9630	0/0:29,0:28:81.28:0,81,9725	1/1:2,1:3:3.01:233,3,0
chr10	96032496	.	AG	A	6757.62	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-0.412;DP=610;FS=2.063;HRun=2;HaplotypeScore=152.6118;InbreedingCoeff=0.9735;MQ=49.83;MQ0=63;MQRankSum=10.272;QD=30.30;ReadPosRankSum=2.882;VQSLOD=4.5575;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:57.17:0,57,831	1/1:1,8:7:17.87:233,18,0	0/0:22,0:2:6.02:0,6,80	0/0:25,0:6:15.01:0,15,174	1/1:2,17:14:24.07:299,24,0	0/0:17,0:17:42.10:0,42,603	0/0:21,0:17:39.13:0,39,583	0/0:26,0:17:51.13:0,51,732	1/1:2,21:23:57.18:740,57,0	0/0:14,0:11:33.11:0,33,494	0/0:9,0:5:12.04:0,12,169	0/0:27,0:24:72.24:0,72,1077	0/0:22,0:20:54.17:0,54,787	0/0:14,0:13:39.12:0,39,565	1/1:0,22:22:63.20:818,63,0	0/0:13,0:13:39.13:0,39,584	0/0:44,0:43:99:0,117,1734	0/0:29,1:29:33.39:0,33,991	1/1:3,13:13:36.09:450,36,0	1/1:5,17:15:33.06:409,33,0	1/1:2,30:32:72.21:935,72,0	0/0:21,0:16:36.12:0,36,538	0/0:16,0:14:30.09:0,30,430	0/0:31,0:29:51.64:0,52,763	1/1:1,18:19:39:498,39,0	1/1:0,35:35:99:1364,105,0	1/1:0,26:26:78.25:1011,78,0	0/0:7,0:7:15.05:0,15,218
chr10	96033425	.	TAACAA	T	7620.23	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=7.110;DP=438;FS=28.001;HRun=0;HaplotypeScore=120.9745;InbreedingCoeff=0.8712;MQ=53.64;MQ0=2;MQRankSum=-7.404;QD=21.17;ReadPosRankSum=-0.150;VQSLOD=2.7745;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,16:23:20.99:321,21,0	1/1:2,0:7:9.03:105,9,0	0/0:19,0:12:12.48:0,12,216	0/0:24,0:11:18.03:0,18,331	1/1:4,0:24:27.08:310,27,0	1/1:2,18:20:38.59:658,39,0	1/1:5,10:15:30.06:526,30,0	1/1:12,12:24:36.11:634,36,0	1/1:3,0:14:27.08:315,27,0	1/1:5,11:16:33.11:611,33,0	1/1:5,10:15:29.96:453,30,0	1/1:5,8:13:12.04:225,12,0	1/1:2,11:13:15.05:281,15,0	1/1:3,4:7:6.02:113,6,0	1/1:4,0:17:33.10:383,33,0	1/1:4,15:19:27.02:436,27,0	0/0:16,0:16:30.10:0,30,760	0/0:19,0:19:33.11:0,33,918	1/1:4,0:11:13.38:146,13,0	1/1:3,0:15:18.05:209,18,0	1/1:5,0:13:9.03:105,9,0	1/1:2,9:11:15.01:245,15,0	1/1:3,9:12:14.41:244,14,0	1/1:3,8:11:18.06:316,18,0	1/1:6,0:18:18.05:210,18,0	1/1:2,0:17:28.38:279,28,0	1/1:6,0:20:33.10:384,33,0	1/1:0,3:3:6.02:113,6,0
chr10	96033957	.	C	CAAG	18226.50	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=0.408;DP=682;FS=9.189;HRun=0;HaplotypeScore=171.1398;InbreedingCoeff=0.9983;MQ=77.65;MQ0=0;MQRankSum=-15.730;QD=55.57;ReadPosRankSum=-4.599;VQSLOD=4.1976;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:11,34:45:99:2217,111,0	0/0:11,0:11:33.11:0,33,550	0/0:20,0:20:42.14:0,42,640	0/0:21,0:21:26.20:0,26,663	0/0:17,0:17:45.13:0,45,698	1/1:4,19:23:60.12:1217,60,0	1/1:7,24:31:93.21:1874,93,0	1/1:12,29:40:99:2369,111,0	0/0:20,0:20:60.20:0,60,993	1/1:5,14:19:57.18:1170,57,0	1/1:3,8:11:24.08:528,24,0	1/1:6,17:23:60.21:1317,60,0	1/1:4,17:21:57.20:1268,57,0	1/1:0,16:16:48.12:1037,48,0	0/0:32,0:32:81.23:0,81,1290	1/1:6,31:37:99:2344,108,0	0/0:35,0:35:99:0,99,1641	0/0:34,0:34:96.30:0,96,1566	0/0:24,0:24:72.22:0,72,1173	0/0:21,0:21:57.18:0,57,912	0/0:40,0:40:99:0,105,1697	1/1:3,10:12:30.06:610,30,0	1/1:5,12:17:48.01:785,48,0	1/1:6,19:24:54.14:1089,54,0	0/0:19,0:19:51.17:0,51,845	0/0:25,0:25:60.20:0,60,995	0/0:35,0:35:93.26:0,93,1480	1/1:2,4:6:18.06:400,18,0
chr10	96033978	.	C	CTG	26343.77	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-2.123;DP=642;FS=2.916;HRun=0;HaplotypeScore=117.5367;InbreedingCoeff=0.9948;MQ=78.05;MQ0=1;MQRankSum=-10.998;QD=49.61;ReadPosRankSum=1.199;VQSLOD=5.6468;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,34:41:99:1860,99,0	1/1:0,12:12:33.07:599,33,0	0/0:17,0:17:51.17:0,51,752	0/0:25,0:25:67.11:0,67,985	1/1:1,15:17:42.14:808,42,0	1/1:5,14:19:54.12:958,54,0	1/1:4,24:29:72.25:1360,72,0	1/1:3,22:24:72.20:1312,72,0	1/1:0,20:20:57.20:1100,57,0	1/1:0,21:22:63.22:1192,63,0	1/1:1,11:13:27.09:517,27,0	1/1:2,17:19:57.20:1090,57,0	1/1:3,17:20:57.20:1072,57,0	1/1:2,17:19:48.15:886,48,0	1/1:1,25:27:75.26:1448,75,0	1/1:0,32:32:93.22:1784,93,0	0/0:33,0:33:96.27:0,96,1421	0/0:36,0:36:99:0,102,1535	1/1:1,26:28:84.26:1584,84,0	1/1:0,22:22:63.22:1210,63,0	1/1:3,37:41:96.33:1853,96,0	1/1:1,9:9:27.09:491,27,0	1/1:4,10:14:33.11:596,33,0	1/1:3,20:23:54.18:978,54,0	1/1:1,16:17:36.12:695,36,0	1/1:1,20:20:57.20:1101,57,0	1/1:1,32:34:81.28:1562,81,0	1/1:0,6:6:15.05:288,15,0
chr10	96034325	.	GA	G	3544.62	PASS	AB=0.824;AC=47;AF=0.839;AN=56;BaseQRankSum=2.930;DP=312;FS=17.518;HRun=8;HaplotypeScore=46.4883;InbreedingCoeff=0.6684;MQ=37.94;MQ0=36;MQRankSum=-4.786;QD=14.77;ReadPosRankSum=3.268;VQSLOD=1.9372;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,11:13:26.99:251,27,0	1/1:3,2:5:5.84:43,6,0	0/0:10,0:1:0.47:0,0,1	0/0:21,1:4:5.96:0,6,55	1/1:2,6:8:18:165,18,0	1/1:6,5:8:17.60:169,18,0	1/1:7,12:19:35.49:340,35,0	1/1:6,8:9:21.03:203,21,0	1/1:4,8:12:24.03:229,24,0	1/1:5,2:5:5.99:58,6,0	1/1:2,6:8:12:111,12,0	1/1:2,6:8:17.99:174,18,0	1/1:0,5:5:15.02:145,15,0	1/1:1,6:5:12.02:115,12,0	1/1:2,4:6:18.03:173,18,0	1/1:4,4:7:12.01:116,12,0	0/0:30,0:29:50.07:0,50,525	0/0:10,0:8:15.50:0,16,170	1/1:6,2:4:6:58,6,0	0/1:11,3:13:0.03:0,0,0	1/1:4,2:4:6.01:58,6,0	1/1:3,2:3:2.98:29,3,0	1/1:8,3:10:11.63:107,12,0	1/1:6,13:18:35.59:342,36,0	1/1:3,10:12:21.03:201,21,0	1/1:2,9:11:27.03:257,27,0	1/1:6,7:12:15.02:143,15,0	1/1:2,2:3:6.01:58,6,0
chr10	96034333	.	AGAACC	A	1938.52	PASS	AB=0.900;AC=25;AF=0.446;AN=56;BaseQRankSum=6.241;DP=356;FS=13.430;HRun=0;HaplotypeScore=74.4058;InbreedingCoeff=0.0997;MQ=37.76;MQ0=30;MQRankSum=-1.208;QD=7.82;ReadPosRankSum=-0.660;VQSLOD=0.8489;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:26:34.04:34,0,383	1/1:5,2:7:17.93:205,18,0	0/0:10,0:1:3.01:0,3,48	0/1:18,0:5:0.94:1,0,96	1/1:10,2:12:2.02:201,2,0	0/1:12,1:10:99:100,0,109	0/1:20,0:22:97.93:98,0,293	0/0:17,0:9:26.38:0,26,219	1/1:9,6:15:25.48:234,25,0	0/0:5,0:6:11.83:0,12,82	0/1:11,0:10:81.92:82,0,137	0/0:9,0:9:12.24:0,12,235	0/1:6,0:6:32.54:33,0,137	0/0:6,0:4:11.98:0,12,99	1/1:9,0:9:11.11:107,11,0	0/0:6,0:6:2.48:0,2,159	0/0:31,1:32:21.16:0,21,926	0/0:10,0:7:17.97:0,18,245	0/1:7,0:7:23.86:53,0,24	0/1:6,10:13:8.95:217,0,9	1/1:4,0:3:8.43:89,8,0	0/0:5,0:3:8.59:0,9,50	0/1:6,1:7:72.26:86,0,72	0/1:22,0:21:76.42:76,0,215	1/1:17,0:17:6.30:119,6,0	0/1:12,0:12:40.71:162,0,41	1/1:12,1:11:17.20:219,17,0	0/0:4,0:2:5.96:0,6,46
chr10	96034337	.	CCAAAA	C	1847.12	PASS	AB=0.950;AC=26;AF=0.464;AN=56;BaseQRankSum=3.196;DP=350;FS=12.668;HRun=0;HaplotypeScore=74.5649;InbreedingCoeff=0.3862;MQ=37.37;MQ0=25;MQRankSum=-2.035;QD=8.28;ReadPosRankSum=0.583;VQSLOD=0.6013;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:26:2.11:2,0,431	1/1:2,4:8:17.57:204,18,0	0/0:13,0:2:4.83:0,5,63	0/0:20,0:6:16.60:0,17,193	1/1:10,1:12:8.97:167,9,0	0/1:13,0:10:22.81:23,0,142	0/1:20,0:21:13.78:14,0,276	0/0:16,0:9:21.83:0,22,124	1/1:12,2:15:32.61:289,33,0	0/0:7,0:7:16.91:0,17,104	0/1:10,0:9:25.23:25,0,95	0/0:9,0:10:22.40:0,22,168	0/1:6,0:6:15.99:16,0,120	0/0:6,0:4:11.85:0,12,79	1/1:2,2:8:17.36:150,17,0	0/0:7,0:6:7.39:0,7,215	0/0:28,0:30:63.25:0,63,1000	0/0:8,0:5:12.01:0,12,160	1/1:2,3:6:14.99:183,15,0	1/1:13,3:13:23.82:251,24,0	1/1:5,0:3:8.91:71,9,0	0/0:6,0:3:8.81:0,9,61	0/1:9,0:7:18.37:18,0,57	0/1:20,0:19:21.41:21,0,172	1/1:9,10:19:29.52:222,30,0	0/1:8,3:11:7.09:212,0,7	1/1:11,1:10:23.39:174,23,0	0/0:4,0:2:5.91:0,6,38
chr10	96035757	.	G	GA	5452.61	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=8.479;DP=551;FS=0.000;HRun=0;HaplotypeScore=129.0357;InbreedingCoeff=0.9565;MQ=81.58;MQ0=0;MQRankSum=-12.390;QD=23.10;ReadPosRankSum=-1.315;VQSLOD=5.2968;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,17:22:28.06:469,28,0	0/0:14,0:14:39.13:0,39,537	0/0:26,0:26:67.94:0,68,847	0/0:14,0:14:11.02:0,11,277	0/0:36,0:36:99:0,105,1434	1/1:4,16:20:45.26:501,45,0	1/1:7,9:16:2.99:329,3,0	1/1:8,18:26:47.89:674,48,0	0/0:13,0:13:39.13:0,39,529	1/1:4,11:15:34.17:374,34,0	1/1:3,15:19:47.62:428,48,0	1/1:6,7:13:9.62:278,10,0	1/1:4,8:12:27.06:281,27,0	1/1:1,14:15:18.28:424,18,0	0/0:20,0:20:51.16:0,51,673	1/1:2,3:5:11.97:109,12,0	0/0:42,0:42:99:0,120,1675	0/0:21,0:21:51.17:0,51,708	0/0:12,0:12:36.12:0,36,503	0/0:32,0:32:96.31:0,96,1322	0/0:17,0:17:47.59:0,48,577	1/1:7,14:20:42.53:442,43,0	1/1:6,18:24:54.64:578,55,0	1/1:5,9:14:16.31:205,16,0	0/0:18,0:18:54.14:0,54,731	0/0:28,0:28:81.25:0,81,1109	0/0:22,0:22:60.20:0,60,821	1/1:2,10:12:32.84:360,33,0
chr10	96035779	.	C	CTA	22170.67	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-4.360;DP=555;FS=2.514;HRun=0;HaplotypeScore=91.1637;InbreedingCoeff=0.9942;MQ=79.43;MQ0=1;MQRankSum=-9.285;QD=48.51;ReadPosRankSum=0.890;VQSLOD=5.9544;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:23:48.16:924,48,0	1/1:0,16:17:48.16:919,48,0	0/0:20,0:20:50.65:0,51,740	0/0:15,0:15:42.11:0,42,612	1/1:2,31:33:84.29:1621,84,0	1/1:2,19:21:57.20:1093,57,0	1/1:5,17:22:48.14:891,48,0	1/1:6,20:28:81.23:1431,81,0	1/1:0,10:11:30.10:579,30,0	1/1:2,18:21:57.16:1030,57,0	1/1:5,15:20:45.15:866,45,0	1/1:1,9:11:27.09:520,27,0	1/1:2,12:13:33.11:635,33,0	1/1:4,10:14:36.12:665,36,0	1/1:2,17:19:45.15:865,45,0	1/1:4,1:5:15.05:286,15,0	0/0:40,0:40:99:0,120,1815	0/0:23,0:23:60.19:0,60,895	1/1:1,16:17:51.16:951,51,0	1/1:3,31:34:93.32:1793,93,0	1/1:2,18:20:51.17:985,51,0	1/1:2,12:13:24.08:462,24,0	1/1:1,23:24:66.23:1270,66,0	1/1:1,14:16:30.10:578,30,0	1/1:0,17:17:48.16:917,48,0	1/1:0,23:23:69.24:1333,69,0	1/1:1,20:21:51.17:984,51,0	1/1:2,8:10:30.10:571,30,0
chr10	96036231	.	CA	C	9587	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=12.784;DP=649;FS=2.919;HRun=3;HaplotypeScore=68.7163;InbreedingCoeff=0.9997;MQ=90.99;MQ0=0;MQRankSum=-2.560;QD=32.61;ReadPosRankSum=4.588;VQSLOD=5.2632;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:78.24:966,78,0	1/1:0,11:11:30.09:371,30,0	0/0:29,0:29:63.71:0,64,1013	0/0:26,0:26:67.48:0,67,869	1/1:0,17:17:39.12:483,39,0	0/0:17,0:17:51.17:0,51,728	0/0:40,0:40:99:0,120,1654	0/0:24,0:24:72.22:0,72,981	1/1:0,27:27:81.25:1004,81,0	0/0:17,0:17:51.16:0,51,711	0/0:10,0:10:27.02:0,27,363	0/0:23,0:23:69.22:0,69,975	0/0:20,0:20:60.14:0,60,784	0/0:28,0:28:78.17:0,78,1028	1/1:1,26:27:69.22:855,69,0	1/1:1,17:18:45.14:558,45,0	0/0:29,0:29:84.26:0,84,1188	0/0:19,0:19:54.16:0,54,758	1/1:0,21:21:60.09:684,60,0	1/1:1,21:22:60.15:724,60,0	1/1:2,53:55:99:1747,141,0	0/0:19,0:19:48.15:0,48,667	0/0:14,0:14:33.08:0,33,450	0/0:22,0:22:60.18:0,60,841	1/1:0,10:10:30.09:371,30,0	1/1:1,28:29:44.04:971,44,0	1/1:0,26:26:69.22:852,69,0	0/0:18,0:18:54.18:0,54,777
chr10	96036558	.	G	GACAGACAGAC	3782.91	PASS	AB=0.870;AC=20;AF=0.370;AN=54;BaseQRankSum=0.233;DP=625;FS=0.000;HRun=0;HaplotypeScore=192.8101;InbreedingCoeff=0.0296;MQ=53.39;MQ0=22;MQRankSum=-5.002;QD=11.64;ReadPosRankSum=-0.575;VQSLOD=2.5256;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:60.60:0,61,726	1/1:2,4:8:6.02:288,6,0	0/0:33,0:19:32.52:0,33,567	0/0:40,0:23:43.70:0,44,895	0/1:29,0:28:19.41:66,0,19	0/1:16,0:16:27.96:54,0,28	1/1:8,0:25:2.64:35,3,0	0/0:38,0:37:96.15:0,96,2075	0/1:5,9:17:37.23:134,0,37	1/1:15,0:16:6.48:502,6,0	./.	0/1:14,0:16:47.14:333,0,47	0/1:15,0:19:4.20:342,0,4	0/1:11,0:15:27.21:39,0,27	0/0:12,9:24:14.95:0,15,118	0/0:25,0:25:35.48:0,35,434	0/0:20,0:20:51.05:0,51,1330	0/0:25,0:24:63.03:0,63,1442	0/1:24,0:21:88.45:530,0,88	0/0:9,7:18:8.66:0,9,62	1/1:18,0:14:5.85:99,6,0	0/1:13,0:17:12.92:105,0,13	0/1:14,0:15:5.08:104,0,5	0/1:20,0:26:0.99:136,0,1	0/0:7,3:12:4.61:0,5,44	0/1:35,0:32:99:781,0,192	0/1:20,0:15:42.41:234,0,42	0/0:9,0:7:21.07:0,21,681
chr10	96036644	.	C	CT	7646.53	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-12.011;DP=605;FS=0.000;HRun=4;HaplotypeScore=78.7790;InbreedingCoeff=0.9993;MQ=82.79;MQ0=0;MQRankSum=-2.186;QD=35.08;ReadPosRankSum=2.176;VQSLOD=5.2209;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,105,1188	0/0:13,0:13:30.09:0,30,340	0/0:24,0:24:51.67:0,52,658	0/0:14,0:14:33.06:0,33,347	0/0:23,0:23:60.17:0,60,680	1/1:1,16:16:39.13:533,39,0	1/1:2,21:22:57.19:779,57,0	0/0:33,0:33:90.25:0,90,1013	0/0:15,0:15:33.09:0,33,374	1/1:1,21:22:63.21:857,63,0	1/1:1,20:21:57.19:780,57,0	1/1:2,20:22:54.18:739,54,0	1/1:1,28:29:75.21:1005,75,0	1/1:1,14:15:39.13:533,39,0	0/0:18,0:18:42.12:0,42,476	0/0:23,0:23:63.18:0,63,715	0/0:20,0:20:60.15:0,60,669	0/0:17,0:17:48.14:0,48,544	0/0:17,0:17:48.13:0,48,536	0/0:20,0:20:54.14:0,54,602	0/0:26,0:26:66.19:0,66,748	1/1:1,16:17:45.15:616,45,0	1/1:1,22:23:54.18:738,54,0	1/1:1,28:29:78.24:1067,78,0	0/0:14,0:14:39.11:0,39,442	0/0:23,1:24:22.14:0,22,640	0/0:26,0:25:69.20:0,69,783	0/0:19,0:19:51.15:0,51,578
chr10	96036843	.	GAAAA	G	4347.14	PASS	AB=0.523;AC=23;AF=0.411;AN=56;BaseQRankSum=6.633;DP=504;FS=1.264;HRun=13;HaplotypeScore=105.0729;InbreedingCoeff=0.8941;MQ=74.20;MQ0=1;MQRankSum=-2.026;QD=21.96;ReadPosRankSum=7.896;VQSLOD=3.1626;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:3,0:34:16.42:42,0,16	0/0:5,0:5:9.03:0,9,217	0/0:18,0:14:20.22:0,20,241	0/0:23,0:19:19.28:0,19,284	0/0:16,0:18:45.11:0,45,826	1/1:2,19:21:45:606,45,0	1/1:1,16:18:40.83:575,41,0	0/0:8,0:38:84.11:0,84,542	0/0:9,0:11:30.05:0,30,578	1/1:3,9:12:24.02:351,24,0	1/1:2,12:14:26.87:341,27,0	1/1:1,15:16:30.09:439,30,0	1/1:3,14:17:30.08:439,30,0	1/1:3,16:19:44.94:628,45,0	0/0:15,0:16:42.14:0,42,894	1/1:1,0:8:6.19:17,6,0	0/0:25,0:28:81.20:0,81,1518	0/0:18,0:20:54.15:0,54,1120	0/0:17,0:22:57.18:0,57,1121	0/0:16,0:17:42.12:0,42,867	0/0:27,0:31:78.16:0,78,1596	1/1:2,12:14:29.98:410,30,0	1/1:1,9:10:9.93:146,10,0	1/1:3,11:15:25.27:354,25,0	0/0:14,0:14:36.11:0,36,732	0/0:18,0:18:45.15:0,45,952	0/0:15,0:18:42.11:0,42,780	0/0:0,0:7:15.63:0,16,99
chr10	96037897	.	C	CCATA	13302.06	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=9.601;DP=587;FS=1.957;HRun=0;HaplotypeScore=106.7471;InbreedingCoeff=0.9697;MQ=83.60;MQ0=1;MQRankSum=-8.412;QD=54.52;ReadPosRankSum=-0.463;VQSLOD=5.9007;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.33:0,96,1726	0/0:7,0:7:18.06:0,18,324	0/0:27,0:26:39.99:0,40,828	0/0:13,0:13:13.50:0,14,539	0/0:15,0:15:39.13:0,39,701	1/1:3,13:15:30.10:779,30,0	1/1:12,18:31:67.47:1638,67,0	1/1:7,16:26:57.17:1378,57,0	0/0:24,0:24:63.22:0,63,1145	1/1:2,18:22:63.19:1543,63,0	1/1:6,9:15:30.10:782,30,0	1/1:2,23:26:63.69:1647,64,0	1/1:2,15:17:39.13:1020,39,0	1/1:2,24:26:69.24:1796,69,0	0/0:29,0:29:81.28:0,81,1466	0/0:13,0:13:33.11:0,33,600	0/0:37,0:37:99:0,111,2009	0/0:18,0:18:51.17:0,51,903	0/0:16,0:16:39.13:0,39,706	0/0:16,0:16:48.16:0,48,871	0/0:36,0:36:96.30:0,96,1713	1/1:3,10:13:24.08:627,24,0	1/1:5,6:12:18.06:467,18,0	1/1:8,23:32:60.21:1547,60,0	0/0:16,0:16:39.13:0,39,699	0/0:17,0:17:51.17:0,51,925	0/0:24,0:24:72.25:0,72,1299	1/1:4,3:7:3.01:78,3,0
chr10	96038123	.	TAGCACAGGGTTTGGATGC	T	1184.41	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.248;DP=653;FS=4.243;HRun=0;HaplotypeScore=290.5193;InbreedingCoeff=0.9011;MQ=82.57;MQ0=0;MQRankSum=-4.129;QD=98.70;ReadPosRankSum=-2.096;VQSLOD=2.2576;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,172,13749	0/0:11,0:11:33.11:0,33,2680	0/0:20,0:20:60.10:0,60,3751	0/0:20,0:20:54.19:0,54,3217	0/0:22,0:22:66.21:0,66,5089	0/0:17,0:10:27.09:0,27,2196	0/0:27,0:21:60.21:0,60,4409	1/1:0,11:11:33.11:1227,33,0	0/0:21,0:21:63.22:0,63,5250	0/0:17,0:10:27.09:0,27,2026	0/0:13,0:11:30.10:0,30,2557	0/0:35,0:23:59.95:0,60,4298	0/0:18,0:15:36.12:0,36,3084	0/0:22,0:19:57.20:0,57,4242	0/0:36,0:36:99:0,108,8671	0/0:18,0:18:54.19:0,54,4383	0/0:37,0:37:99:0,111,8528	0/0:19,0:19:57.20:0,57,4498	0/0:22,0:22:66.23:0,66,4534	0/0:18,0:18:54.19:0,54,4543	0/0:51,0:51:99:0,154,12510	0/0:22,0:19:57.18:0,57,3725	0/0:21,0:16:44.78:0,45,3509	0/0:34,0:32:87.04:0,87,6813	0/0:17,0:17:51.18:0,51,3816	0/0:23,0:23:66.23:0,66,4853	0/0:23,0:23:69.24:0,69,5692	1/1:0,0:1:3.01:67,3,0
chr10	96038161	.	GTC	G	4891.81	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.107;DP=612;FS=48.501;HRun=0;HaplotypeScore=78.2320;InbreedingCoeff=0.9783;MQ=85.04;MQ0=0;MQRankSum=-3.675;QD=24.96;ReadPosRankSum=1.989;VQSLOD=3.0343;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,166,3047	0/0:11,0:11:30.10:0,30,562	0/0:27,0:27:75.24:0,75,1335	0/0:20,0:20:60.18:0,60,1047	0/0:18,0:18:54.18:0,54,997	1/1:1,16:11:18.06:265,18,0	1/1:0,21:14:33.11:486,33,0	0/0:13,0:12:24.08:0,24,433	0/0:25,0:25:75.22:0,75,1354	1/1:0,13:9:27.09:394,27,0	1/1:0,18:16:39.13:574,39,0	1/1:0,29:16:26.98:398,27,0	1/1:1,13:10:15.05:221,15,0	1/1:0,18:12:33.11:486,33,0	0/0:32,0:32:93.31:0,93,1700	0/0:21,0:21:63.20:0,63,1149	0/0:32,0:32:96.33:0,96,1769	0/0:24,0:24:72.25:0,72,1315	0/0:20,0:20:54.14:0,54,976	0/0:14,0:14:39.13:0,39,719	0/0:38,0:38:99:0,111,2050	1/1:1,18:15:36.12:530,36,0	1/1:0,19:14:36.12:530,36,0	1/1:2,26:27:69.23:1009,69,0	0/0:18,0:18:54.17:0,54,972	0/0:19,1:20:16.01:0,16,962	0/0:26,0:26:75.24:0,75,1373	0/0:2,0:2:6.02:0,6,112
chr10	96038383	.	A	ATT	487.03	PASS	AC=12;AF=0.273;AN=44;BaseQRankSum=6.073;DP=510;FS=28.006;HRun=0;HaplotypeScore=65.4112;InbreedingCoeff=0.8288;MQ=66.00;MQ0=39;MQRankSum=-6.251;QD=6.76;ReadPosRankSum=-3.646;VQSLOD=0.7868;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,3:47:99:0,138,2246	0/0:3,0:3:9:0,9,99	0/0:11,0:10:27.09:0,27,427	0/0:20,0:18:49.77:0,50,574	0/0:24,0:24:69.24:0,69,1120	1/1:1,15:2:3.01:56,3,0	./.	./.	0/0:44,8:44:99:0,132,2150	1/1:1,9:3:8.99:124,9,0	1/1:5,7:4:12.04:195,12,0	1/1:0,11:3:3.01:56,3,0	./.	./.	0/0:34,0:34:99:0,102,1609	0/0:15,0:15:45.11:0,45,683	0/0:41,2:41:99:0,120,1904	0/0:26,1:27:27.13:0,27,1115	0/0:23,0:23:63.20:0,63,1001	0/0:11,0:11:33.11:0,33,532	0/0:29,0:29:87.30:0,87,1418	1/1:0,12:5:9.03:150,9,0	1/1:2,9:2:3.01:53,3,0	./.	0/0:14,0:14:42.11:0,42,652	0/0:24,0:23:65.43:0,65,1010	0/0:29,0:29:84.20:0,84,1265	./.
chr10	96038451	.	A	ACAG	1013.41	PASS	AC=14;AF=0.280;AN=50;BaseQRankSum=7.089;DP=524;FS=25.857;HRun=0;HaplotypeScore=81.4069;InbreedingCoeff=0.8055;MQ=55.96;MQ0=41;MQRankSum=-5.296;QD=20.68;ReadPosRankSum=-1.754;VQSLOD=1.5320;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:51:99:0,138,2142	0/0:12,0:12:33.11:0,33,503	0/0:30,0:9:15:0,15,197	0/0:31,0:15:29.95:0,30,387	0/0:29,0:29:81.19:0,81,1222	0/0:10,3:5:12.04:0,12,192	0/0:6,0:3:0.29:0,0,44	./.	0/0:46,0:42:99:0,123,1882	1/1:3,2:4:11.99:203,12,0	1/1:1,9:7:15.05:330,15,0	1/1:1,4:1:3.01:66,3,0	./.	./.	0/0:27,0:27:72.18:0,72,1081	0/0:17,0:17:51.17:0,51,818	0/0:37,0:36:90.26:0,90,1394	0/0:23,0:23:36.28:0,36,836	0/0:20,0:18:45.09:0,45,646	0/0:18,0:18:51.09:0,51,756	0/0:34,0:33:96.28:0,96,1492	1/1:4,9:8:15.05:314,15,0	1/1:1,10:4:6.02:132,6,0	1/1:2,1:3:3.01:66,3,0	0/0:18,0:17:48.09:0,48,710	0/0:28,1:28:81.24:0,81,1271	0/0:24,0:24:57.11:0,57,880	1/1:0,1:1:3.01:66,3,0
chr10	96040840	.	CA	C	11726.23	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=14.639;DP=700;FS=5.720;HRun=3;HaplotypeScore=73.5525;InbreedingCoeff=0.9972;MQ=94.56;MQ0=0;MQRankSum=-2.418;QD=33.03;ReadPosRankSum=3.450;VQSLOD=5.4624;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,59:61:99:2007,163,0	0/0:7,0:7:21.07:0,21,302	0/0:32,0:32:64.59:0,65,835	0/0:30,0:30:56.30:0,56,718	0/0:20,0:20:57.16:0,57,784	1/1:1,23:24:66.21:817,66,0	1/1:1,14:15:36.11:446,36,0	1/1:0,34:34:99:1251,102,0	0/0:37,0:37:99:0,108,1535	1/1:1,32:33:93.23:1108,93,0	1/1:0,15:15:45.14:558,45,0	1/1:1,26:27:72.23:892,72,0	1/1:0,21:21:63.20:780,63,0	1/1:0,18:18:39.12:483,39,0	0/0:25,0:25:72.23:0,72,1018	1/1:0,35:35:87.27:1078,87,0	0/0:23,0:23:66.14:0,66,856	0/0:25,0:25:72.22:0,72,1016	0/0:26,0:26:78.26:0,78,1119	0/0:15,0:15:45.15:0,45,647	0/0:45,0:45:99:0,129,1779	1/1:1,20:21:51.16:632,51,0	1/1:2,19:21:48.15:595,48,0	1/1:1,24:25:72.23:892,72,0	0/0:15,0:15:42.11:0,42,568	0/0:18,0:18:51.17:0,51,733	0/0:27,0:27:78.24:0,78,1086	1/1:0,5:5:15.05:186,15,0
chr10	96042153	.	C	CGG	3074.19	PASS	AB=0.897;AC=23;AF=0.411;AN=56;BaseQRankSum=2.686;DP=365;FS=2.006;HRun=3;HaplotypeScore=63.3127;InbreedingCoeff=0.6290;MQ=48.96;MQ0=35;MQRankSum=-6.721;QD=22.28;ReadPosRankSum=-0.483;VQSLOD=1.3338;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:16:33.10:0,33,395	0/0:5,0:4:9.03:0,9,113	0/0:43,1:6:2.08:0,2,90	0/0:27,0:5:1.58:0,2,6	0/0:15,0:15:39.12:0,39,505	1/1:7,12:18:48.16:747,48,0	1/1:8,10:18:48.11:694,48,0	0/1:12,0:12:33.43:33,0,122	0/0:13,0:12:32.99:0,33,404	1/1:8,4:10:21.07:338,21,0	1/1:10,3:13:33.11:499,33,0	1/1:3,2:4:9.03:149,9,0	1/1:4,0:4:9.49:123,9,0	1/1:5,0:3:5.95:69,6,0	0/0:11,0:11:30.08:0,30,383	0/0:5,0:3:9.03:0,9,124	0/0:24,0:22:48.11:0,48,605	0/0:12,0:11:21.07:0,21,269	0/0:11,0:7:11.24:0,11,194	0/0:8,0:7:15.02:0,15,162	0/0:12,0:8:18.05:0,18,229	1/1:6,1:7:8.62:111,9,0	1/1:4,2:5:3.01:50,3,0	1/1:6,4:9:18.53:296,19,0	0/0:11,0:10:18.05:0,18,222	0/1:17,2:18:99:120,0,174	0/0:10,0:10:11.06:0,11,158	0/1:5,0:5:43.90:44,0,66
chr10	96042170	.	A	AAAC	1772.60	PASS	AB=0.771;AC=20;AF=0.357;AN=56;BaseQRankSum=6.434;DP=461;FS=10.918;HRun=0;HaplotypeScore=78.6850;InbreedingCoeff=0.7732;MQ=61.42;MQ0=25;MQRankSum=-4.292;QD=13.33;ReadPosRankSum=4.157;VQSLOD=2.3529;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:47.59:0,48,422	0/0:3,0:3:8.87:0,9,65	0/0:68,0:15:25.25:0,25,254	0/0:51,0:14:16.68:0,17,129	0/0:17,0:17:50.88:0,51,496	1/1:4,8:19:5.18:447,5,0	1/1:7,10:19:19.84:411,20,0	0/0:16,0:16:29.90:0,30,261	0/0:13,0:12:28.78:0,29,241	0/1:4,5:9:0.37:188,0,0	1/1:6,7:14:14.64:241,15,0	1/1:4,2:5:12:138,12,0	1/1:2,0:8:5.90:41,6,0	1/1:3,1:2:2.64:42,3,0	0/0:13,0:13:38.95:0,39,424	0/0:5,0:3:8.89:0,9,59	0/0:28,0:27:74.85:0,75,783	0/0:19,0:18:42.87:0,43,363	0/0:10,0:9:23.25:0,23,210	0/0:11,0:10:23.95:0,24,218	0/0:13,0:11:20.80:0,21,183	1/1:5,0:6:11.07:107,11,0	1/1:6,2:7:12:146,12,0	1/1:4,10:15:11.44:186,11,0	0/0:11,0:10:26.73:0,27,213	0/1:20,1:22:23.01:23,0,502	0/0:14,0:14:35.77:0,36,310	0/0:7,0:7:19.34:0,19,124
chr10	96042677	.	GAC	G	271.15	PASS	AB=0.947;AC=12;AF=0.240;AN=50;BaseQRankSum=1.678;DP=615;FS=14.069;HRun=0;HaplotypeScore=131.6945;InbreedingCoeff=-0.0682;MQ=69.51;MQ0=15;MQRankSum=1.780;QD=1.13;ReadPosRankSum=0.566;VQSLOD=1.5437;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:18.42:0,18,178	0/0:11,0:11:6.02:0,6,80	./.	./.	0/1:18,3:20:68:68,0,177	0/0:18,0:18:0:0,0,0	0/1:27,0:26:0:0,0,0	0/0:28,0:28:22.45:0,22,116	0/1:17,0:16:21.24:21,0,61	0/0:20,0:19:27.88:0,28,278	./.	0/0:11,0:11:2.96:0,3,19	0/0:9,0:9:2.99:0,3,24	1/1:7,0:6:2.68:11,3,0	0/1:17,3:20:54.39:54,0,176	0/0:4,0:6:15.01:0,15,158	0/1:23,3:27:99:138,0,100	0/1:21,1:21:11.08:11,0,226	0/0:14,0:12:8.90:0,9,103	0/1:18,0:19:29.33:29,0,138	0/0:25,0:25:5.17:0,5,109	0/1:23,0:21:2.06:2,0,39	0/0:15,0:14:3.01:0,3,34	0/1:25,0:24:0.10:1,0,0	0/0:12,0:13:8.98:0,9,107	0/1:29,0:29:57.96:58,0,135	0/0:10,0:10:15.05:0,15,209	0/0:8,0:8:8.49:0,8,78
chr10	96042733	.	C	CAAGGTAGGGTT	16521.82	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=6.167;DP=480;FS=4.483;HRun=0;HaplotypeScore=168.9230;InbreedingCoeff=0.9766;MQ=62.72;MQ0=13;MQRankSum=-14.192;QD=116.35;ReadPosRankSum=-6.736;VQSLOD=3.1866;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:84.10:0,84,2656	0/0:9,0:9:18.06:0,18,592	0/0:37,0:17:35.84:0,36,928	0/0:39,0:28:49.48:0,49,1436	0/0:16,0:16:45.12:0,45,1436	1/1:10,7:19:48.12:2427,48,0	1/1:18,8:27:66.16:3062,66,0	0/0:27,0:27:57.17:0,57,1599	0/0:14,0:14:39.12:0,39,1236	1/1:11,7:19:48.16:2544,48,0	1/1:6,3:11:24.04:1119,24,0	1/1:6,8:15:42.14:2154,42,0	1/1:3,3:6:18.06:892,18,0	1/1:3,2:6:9.03:494,9,0	0/0:16,0:16:45.14:0,45,1352	0/0:10,0:10:27.07:0,27,776	0/0:23,0:22:45.12:0,45,1301	0/0:21,0:21:51.12:0,51,1434	0/0:8,0:8:18.05:0,18,437	0/0:13,0:13:36.11:0,36,1035	0/0:26,0:26:69.19:0,69,2137	1/1:6,7:13:36.09:1738,36,0	1/1:4,5:10:27.02:1332,27,0	1/1:9,5:15:16.39:760,16,0	0/0:11,0:11:30.09:0,30,888	0/0:15,0:15:42.14:0,42,1401	0/0:16,0:16:42.12:0,42,1202	0/0:4,0:4:9.03:0,9,266
chr10	96043198	.	ACTCAGGCTGGGTTC	A	6523.78	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=11.289;DP=499;FS=66.533;HRun=0;HaplotypeScore=193.2007;InbreedingCoeff=0.9095;MQ=88.40;MQ0=0;MQRankSum=-11.133;QD=55.76;ReadPosRankSum=1.956;VQSLOD=2.0864;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:39.13:0,39,2314	0/0:7,0:7:21.07:0,21,1276	0/0:24,0:24:55.08:0,55,2720	0/0:21,0:21:48.13:0,48,2184	0/0:16,0:16:45.15:0,45,2287	1/1:8,2:10:6.02:246,6,0	1/1:2,9:11:15.05:616,15,0	1/1:8,4:12:9.02:274,9,0	0/0:24,0:24:63.20:0,63,3747	1/1:4,9:13:27.06:817,27,0	1/1:4,6:10:9.03:199,9,0	1/1:1,9:10:27.09:1109,27,0	1/1:1,6:7:18.06:739,18,0	1/1:4,6:10:18.02:636,18,0	0/0:28,0:28:72.25:0,72,4601	0/0:11,0:11:30.10:0,30,1783	0/0:45,0:45:99:0,123,8015	0/0:23,0:23:57.20:0,57,3382	0/0:23,0:23:51.15:0,51,2631	0/0:13,0:13:36.12:0,36,2358	0/0:50,0:50:99:0,138,8206	1/1:3,13:16:30.10:1232,30,0	1/1:2,6:8:12.04:408,12,0	1/1:5,2:7:3.01:123,3,0	0/0:23,0:23:54.19:0,54,3483	0/0:25,0:25:72.24:0,72,4296	0/0:30,0:30:78.27:0,78,5081	1/1:2,1:3:3.01:123,3,0
chr10	96049533	.	TTTG	T	1689.59	PASS	AB=0.938;AC=24;AF=0.462;AN=52;BaseQRankSum=10.824;DP=417;FS=57.343;HRun=0;HaplotypeScore=78.2071;InbreedingCoeff=0.8439;MQ=69.69;MQ0=9;MQRankSum=-10.640;QD=11.34;ReadPosRankSum=-2.942;VQSLOD=0.6849;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,3:21:28.77:324,29,0	0/0:4,0:4:6.02:0,6,117	0/0:45,0:14:30.44:0,30,317	0/1:45,0:25:10.44:10,0,383	0/0:15,0:15:39.06:0,39,693	1/1:6,1:7:18.31:152,18,0	1/1:8,2:10:20.50:184,21,0	./.	0/0:15,0:15:30.10:0,30,588	1/1:15,0:15:34.70:215,35,0	1/1:8,1:9:26.68:201,27,0	1/1:5,1:6:14.72:121,15,0	1/1:4,0:4:9.76:85,10,0	1/1:3,2:5:14.88:169,15,0	0/0:7,0:7:17.98:0,18,310	1/1:3,1:4:9.80:88,10,0	0/0:45,0:45:99:0,117,2189	0/0:30,0:30:68.95:0,69,1422	0/0:20,0:20:57.17:0,57,1063	0/0:11,0:10:30.10:0,30,588	0/0:17,0:16:48.03:0,48,736	1/1:8,0:8:20.69:138,21,0	0/1:6,1:7:1.02:85,0,1	1/1:8,0:8:14.42:125,14,0	0/0:20,0:20:60.09:0,60,1004	0/0:20,0:20:39.37:0,39,1021	0/0:19,0:19:48:0,48,895	./.
chr10	96049534	.	TTG	T	2798.19	PASS	AB=1.000;AC=25;AF=0.481;AN=52;BaseQRankSum=10.315;DP=417;FS=63.037;HRun=0;HaplotypeScore=66.4818;InbreedingCoeff=0.8935;MQ=68.56;MQ0=9;MQRankSum=-10.650;QD=18.78;ReadPosRankSum=-3.078;VQSLOD=0.9042;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,10:21:44.66:468,45,0	0/0:4,0:4:6.02:0,6,92	0/0:44,0:14:20.03:0,20,227	0/1:45,0:25:7.70:8,0,323	0/0:15,0:15:38.58:0,39,547	1/1:2,5:7:20.98:249,21,0	1/1:8,2:10:29.72:285,30,0	./.	0/0:15,0:15:30.10:0,30,465	1/1:9,6:15:44.63:434,45,0	1/1:5,4:9:26.88:293,27,0	1/1:3,3:6:15.04:198,15,0	1/1:1,3:4:12.01:144,12,0	1/1:3,2:5:15.03:174,15,0	0/0:7,0:7:17.98:0,18,249	1/1:2,2:4:11.98:135,12,0	0/0:44,0:44:99:0,117,1753	0/0:31,0:31:71.88:0,72,1153	0/0:21,0:21:59.81:0,60,842	0/0:11,0:10:30.10:0,30,465	0/0:17,0:16:48.01:0,48,589	1/1:4,4:8:20.94:235,21,0	1/1:2,5:7:15.47:174,15,0	1/1:1,7:8:14.82:216,15,0	0/0:20,0:20:60.09:0,60,818	0/0:18,1:19:13.60:0,14,778	0/0:19,0:19:47.84:0,48,712	./.
chr10	96049535	.	TG	T	2177.55	PASS	AB=0.989;AC=26;AF=0.500;AN=52;BaseQRankSum=10.628;DP=416;FS=82.408;HRun=1;HaplotypeScore=61.9482;InbreedingCoeff=0.8140;MQ=68.67;MQ0=9;MQRankSum=-10.762;QD=11.34;ReadPosRankSum=-3.191;VQSLOD=-0.3424;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,4:21:47.75:381,48,0	0/0:5,0:5:5.97:0,6,69	0/1:44,0:14:12.79:13,0,154	0/1:44,1:25:26.34:26,0,230	0/0:15,0:15:34.47:0,34,415	1/1:7,0:7:20.93:167,21,0	1/1:6,4:10:29.95:293,30,0	./.	0/0:15,0:15:30.09:0,30,355	1/1:12,3:15:44.89:403,45,0	1/1:7,2:9:26.66:211,27,0	1/1:4,1:5:15:136,15,0	1/1:4,0:4:11.97:97,12,0	1/1:5,0:5:14.96:120,15,0	0/0:7,0:7:17.97:0,18,194	1/1:3,1:4:12:115,12,0	0/0:45,0:45:99:0,117,1347	0/0:31,0:31:71.81:0,72,901	0/0:20,0:20:59.82:0,60,656	0/0:11,0:10:30.09:0,30,355	0/0:17,0:16:47.97:0,48,476	1/1:6,1:7:20.90:163,21,0	1/1:6,1:7:17.88:134,18,0	1/1:7,1:8:14.54:128,15,0	0/0:20,0:20:60.05:0,60,645	0/0:19,0:19:31.51:0,32,610	0/0:19,0:19:47.86:0,48,546	./.
chr10	96049553	.	CT	C	1527.50	PASS	AB=0.909;AC=25;AF=0.481;AN=52;BaseQRankSum=9.131;DP=430;FS=26.733;HRun=7;HaplotypeScore=65.1357;InbreedingCoeff=0.8573;MQ=64.43;MQ0=18;MQRankSum=-7.512;QD=11.31;ReadPosRankSum=-2.305;VQSLOD=0.3461;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,12:22:29.99:288,30,0	0/0:6,0:6:18.06:0,18,220	0/0:37,0:9:18.01:0,18,196	0/0:41,0:19:25.82:0,26,289	0/0:14,0:14:36.12:0,36,453	1/1:2,2:4:11.98:110,12,0	1/1:7,5:11:15.01:150,15,0	./.	0/0:17,0:17:39.12:0,39,479	1/1:6,6:12:20.81:197,21,0	1/1:4,7:11:14.99:152,15,0	1/1:6,4:10:15.02:152,15,0	1/1:3,3:5:6:61,6,0	1/1:3,4:7:15.03:151,15,0	0/0:13,0:11:27.07:0,27,326	1/1:5,7:12:11.46:199,11,0	0/0:45,0:45:99:0,123,1514	0/0:40,0:40:99:0,102,1267	0/0:19,0:19:38.96:0,39,466	0/0:9,0:8:21.07:0,21,261	0/0:15,0:14:30.09:0,30,373	1/1:3,4:7:15.02:147,15,0	1/1:5,0:5:5.98:59,6,0	1/1:7,0:7:6.01:60,6,0	0/0:18,0:18:48.14:0,48,578	0/1:18,2:20:9.98:10,0,515	0/0:21,0:21:44.89:0,45,565	./.
chr10	96049584	.	GGC	G	144.01	PASS	AB=0.909;AC=3;AF=0.060;AN=50;BaseQRankSum=4.600;DP=434;FS=12.340;HRun=0;HaplotypeScore=75.4256;InbreedingCoeff=0.5809;MQ=50.38;MQ0=13;MQRankSum=-4.509;QD=8.00;ReadPosRankSum=0.029;VQSLOD=2.2299;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:39.09:0,39,745	0/0:10,0:10:30.10:0,30,606	./.	./.	0/0:18,0:18:54.17:0,54,1059	0/0:12,0:12:33.07:0,33,606	0/0:15,0:13:30.10:0,30,586	1/1:1,7:7:21.01:228,21,0	0/0:16,0:16:42.14:0,42,828	0/0:13,0:12:30.10:0,30,580	0/0:15,0:15:39.13:0,39,779	0/0:14,0:14:39.09:0,39,717	0/0:3,0:3:6.02:0,6,122	0/1:9,1:10:18.76:19,0,454	0/0:11,0:10:30.10:0,30,609	0/0:15,0:15:36.11:0,36,689	0/0:42,0:42:99:0,120,2418	0/0:49,0:48:99:0,144,2920	0/0:16,0:12:36.09:0,36,688	0/0:8,0:8:24.07:0,24,451	0/0:27,0:26:72.25:0,72,1443	0/0:15,0:15:42.10:0,42,771	0/0:6,0:6:18.06:0,18,365	0/0:6,0:6:12.04:0,12,242	0/0:19,0:19:54.19:0,54,1091	0/0:25,0:25:72.25:0,72,1458	0/0:21,0:20:47.84:0,48,957	./.
chr10	96049590	.	G	GTC	219.65	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=4.774;DP=432;FS=12.608;HRun=0;HaplotypeScore=66.9339;InbreedingCoeff=0.7542;MQ=50.79;MQ0=14;MQRankSum=-4.531;QD=27.46;ReadPosRankSum=-1.026;VQSLOD=3.6832;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:33.11:0,33,537	0/0:10,0:10:30.10:0,30,480	0/0:12,0:2:2.74:0,3,12	./.	0/0:18,0:17:51.17:0,51,826	0/0:10,0:10:27.09:0,27,440	0/0:14,0:12:33.09:0,33,510	1/1:1,7:7:21.07:311,21,0	0/0:16,0:16:36.12:0,36,587	0/0:11,0:10:27.09:0,27,440	0/0:14,0:14:39.13:0,39,634	0/0:13,0:13:39.13:0,39,634	0/0:3,0:3:6.02:0,6,98	0/0:9,1:10:18.73:0,19,337	0/0:12,0:11:33.11:0,33,526	0/0:15,0:15:36.12:0,36,576	0/0:41,0:41:99:0,114,1834	0/0:54,0:53:99:0,159,2499	0/0:15,0:11:33.11:0,33,538	0/0:10,0:10:30.10:0,30,480	0/0:27,0:26:72.18:0,72,1142	0/0:13,0:13:39.13:0,39,624	0/0:8,0:8:21.06:0,21,318	0/0:6,0:6:12.04:0,12,196	0/0:17,0:17:45.15:0,45,728	0/0:25,0:25:72.25:0,72,1169	0/0:20,0:19:48.64:0,49,781	./.
chr10	96049736	.	ATCTG	A	1351.49	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.324;DP=661;FS=19.249;HRun=0;HaplotypeScore=119.0839;InbreedingCoeff=0.9965;MQ=70.37;MQ0=0;MQRankSum=-2.605;QD=28.16;ReadPosRankSum=-0.480;VQSLOD=2.2003;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.31:0,90,2233	0/0:17,0:17:44.86:0,45,982	0/0:18,0:18:33.11:0,33,728	0/0:21,0:21:39.13:0,39,917	0/0:24,0:24:60.18:0,60,1468	0/0:16,0:15:39.13:0,39,958	0/0:20,0:20:48.16:0,48,1158	1/1:8,17:25:51.07:766,51,0	0/0:17,0:17:36.12:0,36,914	0/0:28,0:28:60.21:0,60,1478	0/0:28,0:28:69.24:0,69,1717	0/0:21,0:21:51.16:0,51,1236	0/0:12,0:12:27.09:0,27,685	0/0:14,0:14:33.11:0,33,817	0/0:21,0:21:57.20:0,57,1443	0/0:34,0:34:87.30:0,87,2172	0/0:31,0:31:72.23:0,72,1760	0/0:31,0:31:81.28:0,81,1988	0/0:14,0:14:24.08:0,24,596	0/0:21,0:21:45.15:0,45,1068	0/0:19,0:19:54.17:0,54,1261	0/0:25,0:25:51.18:0,51,1232	0/0:24,0:24:54.19:0,54,1371	0/0:15,0:15:27.09:0,27,678	0/0:25,0:25:57.20:0,57,1439	0/0:49,0:49:99:0,117,2938	0/0:34,0:34:78.27:0,78,1942	1/1:8,15:23:24.43:706,24,0
chr10	96050959	.	A	AC	4163.36	PASS	AB=0.733;AC=27;AF=0.482;AN=56;BaseQRankSum=11.649;DP=588;FS=4.334;HRun=1;HaplotypeScore=78.4692;InbreedingCoeff=0.8413;MQ=67.05;MQ0=0;MQRankSum=-8.021;QD=14.46;ReadPosRankSum=1.222;VQSLOD=3.2122;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,27:33:30.52:759,31,0	0/0:16,0:16:48.16:0,48,671	0/0:10,0:10:20.09:0,20,265	0/0:12,0:10:20.67:0,21,175	0/0:19,0:19:57.17:0,57,759	1/1:11,14:24:37.79:447,38,0	1/1:9,7:16:14.61:162,15,0	1/1:24,11:35:19.08:482,19,0	0/0:11,0:11:33.11:0,33,461	1/1:17,8:24:20.18:255,20,0	1/1:13,15:28:6.07:303,6,0	1/1:6,4:10:0.08:119,0,0	1/1:6,9:15:20.63:250,21,0	1/1:9,6:15:3.69:160,4,0	0/0:24,0:24:72.24:0,72,1007	1/1:8,11:19:38.14:430,38,0	0/0:27,0:27:81.24:0,81,1108	0/0:29,0:29:84.27:0,84,1152	0/0:32,0:32:90.28:0,90,1227	0/0:31,0:31:90.27:0,90,1214	0/0:14,0:14:39.13:0,39,544	1/1:11,8:19:5.14:156,5,0	1/1:8,13:22:32.67:358,33,0	0/1:7,4:11:9.41:24,0,9	0/0:22,0:22:57.18:0,57,778	0/0:23,0:23:69.22:0,69,948	0/0:30,0:30:87.28:0,87,1190	1/1:7,8:15:25.74:259,26,0
chr10	96051572	.	AC	A	8673.58	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.665;DP=733;FS=0.000;HRun=2;HaplotypeScore=72.2567;InbreedingCoeff=0.9995;MQ=83.84;MQ0=0;MQRankSum=-3.234;QD=36.14;ReadPosRankSum=0.323;VQSLOD=5.1625;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,2141	0/0:10,0:10:30.09:0,30,429	0/0:33,0:33:96.30:0,96,1361	0/0:24,0:23:66.01:0,66,867	0/0:16,0:16:48.16:0,48,719	1/1:0,15:15:39.13:506,39,0	1/1:0,27:27:75.24:972,75,0	0/0:35,0:35:99:0,102,1508	0/0:23,0:23:69.23:0,69,1033	1/1:0,36:36:99:1385,108,0	1/1:0,19:19:54.18:701,54,0	1/1:0,21:21:63.20:818,63,0	1/1:0,18:18:51.17:662,51,0	1/1:0,24:24:57.19:740,57,0	0/0:36,0:36:99:0,102,1507	0/0:21,0:21:63.21:0,63,944	0/0:26,0:26:72.24:0,72,1079	0/0:40,0:40:99:0,114,1649	0/0:15,0:15:45.15:0,45,674	0/0:23,0:23:69.21:0,69,990	0/0:49,0:49:99:0,144,2113	1/1:1,24:25:72.19:905,72,0	1/1:0,26:26:75.24:973,75,0	1/1:0,29:29:78.25:1013,78,0	0/0:11,0:11:30.10:0,30,449	0/0:35,2:37:30.44:0,30,1449	0/0:36,0:35:99:0,108,1606	0/0:8,0:8:24.06:0,24,339
chr10	96051916	.	GT	G	7386.72	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=15.055;DP=655;FS=1.697;HRun=6;HaplotypeScore=68.8565;InbreedingCoeff=0.9990;MQ=61.42;MQ0=1;MQRankSum=1.125;QD=26.48;ReadPosRankSum=1.369;VQSLOD=5.3393;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:75.99:0,76,1219	0/0:9,0:9:24.08:0,24,326	0/0:16,0:13:21.18:0,21,329	0/0:13,0:10:30.08:0,30,369	0/0:23,0:23:69.20:0,69,908	1/1:4,20:24:51.14:575,51,0	1/1:0,16:16:45.13:508,45,0	1/1:34,0:34:66.15:435,66,0	0/0:24,0:24:66.22:0,66,898	1/1:0,27:27:81.22:909,81,0	1/1:1,22:23:63.17:706,63,0	1/1:2,26:28:69.20:783,69,0	1/1:2,19:21:51.14:577,51,0	1/1:0,17:17:42.12:476,42,0	0/0:25,0:25:72.21:0,72,951	0/0:27,0:27:78.25:0,78,1046	0/0:35,0:35:93.25:0,93,1217	0/0:27,0:27:56.97:0,57,840	0/0:16,0:15:36.12:0,36,488	0/0:33,0:33:93.31:0,93,1267	0/0:13,0:13:39.12:0,39,517	1/1:0,17:17:45.13:510,45,0	1/1:1,32:33:91.05:1019,91,0	1/1:2,22:24:63.65:714,64,0	0/0:20,0:20:54.18:0,54,737	0/0:24,1:25:41.19:0,41,919	0/0:36,0:36:99:0,108,1455	1/1:15,0:15:29.10:174,29,0
chr10	96051921	.	TG	T	3492.17	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=18.495;DP=666;FS=2.456;HRun=1;HaplotypeScore=81.3171;InbreedingCoeff=0.7874;MQ=60.24;MQ0=1;MQRankSum=0.832;QD=12.13;ReadPosRankSum=3.063;VQSLOD=2.5019;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,100,1385	0/0:8,0:8:24.06:0,24,327	0/0:15,0:12:34.96:0,35,397	0/0:16,0:13:39:0,39,440	0/0:24,0:24:72.22:0,72,1023	1/1:20,0:20:43.88:170,44,0	1/1:16,0:16:37.33:138,37,0	1/1:1,37:38:99:1424,108,0	0/0:22,0:22:66.19:0,66,929	0/1:31,0:31:37.08:132,0,37	1/1:23,0:23:32.80:212,33,0	1/1:27,0:27:36.73:197,37,0	1/1:20,0:20:22.03:146,22,0	0/1:19,0:19:5.55:101,0,6	0/0:25,0:25:72.23:0,72,1021	0/0:26,0:26:78.19:0,78,1035	0/0:34,0:34:96.20:0,96,1306	0/0:26,4:30:23.71:0,24,847	0/0:16,0:15:45.10:0,45,565	0/0:32,0:32:96.29:0,96,1337	0/0:13,0:13:39.13:0,39,566	1/1:17,0:17:24.41:133,24,0	1/1:33,0:33:55.62:270,56,0	0/1:27,0:27:30.68:151,0,31	0/0:18,0:18:54.17:0,54,758	0/0:26,0:26:71.10:0,71,959	0/0:38,0:38:99:0,114,1537	1/1:0,17:17:30.10:417,30,0
chr10	96054180	.	GCA	G	10805.68	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=13.178;DP=1095;FS=1.849;HRun=0;HaplotypeScore=151.1964;InbreedingCoeff=0.9995;MQ=58.41;MQ0=31;MQRankSum=1.201;QD=27.50;ReadPosRankSum=1.809;VQSLOD=5.6792;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:47:62.79:0,63,618	0/0:17,0:17:45.15:0,45,748	0/0:62,1:17:43.96:0,44,661	0/0:85,0:34:75.74:0,76,1099	0/0:23,0:23:48.16:0,48,798	1/1:2,20:22:57.18:719,57,0	1/1:5,42:47:99:1401,111,0	1/1:13,29:41:84.27:1060,84,0	0/0:45,0:45:99:0,129,2127	1/1:6,20:25:60.19:754,60,0	1/1:1,12:13:33.11:416,33,0	1/1:6,26:32:48.66:708,49,0	1/1:5,24:28:66.21:833,66,0	1/1:2,33:34:75.22:946,75,0	0/0:51,0:51:99:0,120,1987	0/0:9,0:41:90.05:0,90,836	0/0:45,0:45:99:0,123,2019	0/0:36,1:37:57.94:0,58,1419	0/0:26,2:25:22.31:0,22,849	0/0:32,1:33:30.68:0,31,970	0/0:95,2:95:99:0,214,3529	1/1:3,22:24:45.04:568,45,0	1/1:7,20:27:48:606,48,0	1/1:5,66:71:99:2082,166,0	0/0:27,0:27:72.22:0,72,1141	0/0:37,0:36:84.27:0,84,1355	0/0:22,0:21:66.23:0,66,1091	1/1:4,19:23:44.65:711,45,0
chr10	96054828	.	CAGCAGGGAAGTCGCATGGCGAGGGGCTGA	C	10044.83	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=11.007;DP=515;FS=15.521;HRun=0;HaplotypeScore=371.7124;InbreedingCoeff=0.9361;MQ=84.78;MQ0=0;MQRankSum=-10.043;QD=83.02;ReadPosRankSum=5.969;VQSLOD=2.7795;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,10962	0/0:6,0:6:15.05:0,15,1491	0/0:14,0:14:27.09:0,27,1683	0/0:22,0:22:63.22:0,63,3819	0/0:18,0:18:48.15:0,48,4400	1/1:3,3:6:6.02:461,6,0	1/1:5,8:13:9.03:692,9,0	0/0:25,0:25:60.20:0,60,3384	0/0:19,0:19:54.19:0,54,6277	1/1:1,9:10:27.07:1641,27,0	1/1:7,4:11:6.02:461,6,0	1/1:10,7:17:21.07:1611,21,0	1/1:4,5:9:18.06:1384,18,0	1/1:7,10:17:15.05:1153,15,0	0/0:23,0:23:63.22:0,63,6382	0/0:13,0:13:39.13:0,39,4353	0/0:39,0:39:99:0,114,12425	0/0:35,0:35:96.30:0,96,10661	0/0:17,0:17:51.18:0,51,4101	0/0:15,0:15:42.14:0,42,4642	0/0:39,0:39:99:0,114,13458	1/1:8,6:14:15.05:1053,15,0	1/1:4,6:10:9.03:692,9,0	1/1:7,7:14:12.04:897,12,0	0/0:28,0:28:84.27:0,84,8337	0/0:16,0:16:39.13:0,39,4542	0/0:19,0:19:57.20:0,57,6012	0/0:7,0:7:21.07:0,21,2346
chr10	96055002	.	A	AC	477.71	PASS	AB=0.848;AC=28;AF=0.500;AN=56;BaseQRankSum=13.502;DP=413;FS=1.069;HRun=10;HaplotypeScore=107.3157;InbreedingCoeff=0.7281;MQ=67.26;MQ0=1;MQRankSum=-12.598;QD=2.18;ReadPosRankSum=-0.810;VQSLOD=-0.2493;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:59.96:223,60,0	0/0:2,0:2:5.99:0,6,49	0/0:13,0:13:23.38:0,23,159	0/0:14,0:14:9.93:0,10,112	0/0:9,0:9:17.97:0,18,148	1/1:11,0:11:10.43:28,10,0	1/1:12,0:13:6.77:17,7,0	0/1:23,0:23:47.58:48,0,104	0/0:21,0:22:55.96:0,56,447	1/1:19,0:20:11.96:41,12,0	1/1:9,0:9:9.63:26,10,0	1/1:8,0:8:6.76:16,7,0	1/1:10,0:10:3.38:9,3,0	1/1:18,0:18:13.76:33,14,0	0/0:17,0:17:38.92:0,39,319	1/1:11,0:11:11.83:73,12,0	0/1:9,7:16:46.01:46,0,79	0/0:19,0:19:44.89:0,45,363	0/0:16,0:16:35.14:0,35,273	0/0:7,0:7:11.96:0,12,98	0/0:23,1:24:13.78:0,14,303	1/1:18,0:18:19.12:50,19,0	1/1:11,0:11:7.58:22,8,0	1/1:14,0:14:9.18:27,9,0	0/0:13,0:13:29.92:0,30,243	0/0:14,0:14:32.93:0,33,266	0/0:22,0:23:28.84:0,29,374	1/1:6,0:6:7.79:30,8,0
chr10	96055010	.	C	CA	581.51	PASS	AB=0.888;AC=9;AF=0.161;AN=56;BaseQRankSum=7.059;DP=415;FS=12.733;HRun=0;HaplotypeScore=114.2402;InbreedingCoeff=0.5741;MQ=64.39;MQ0=1;MQRankSum=-7.486;QD=6.61;ReadPosRankSum=-0.917;VQSLOD=2.8338;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:30:53.68:354,54,0	0/0:2,0:2:6.02:0,6,84	0/0:12,0:11:32.67:0,33,373	0/0:12,0:11:24.83:0,25,320	0/0:15,0:15:38.84:0,39,414	0/0:12,0:12:12.71:0,13,84	0/0:10,0:9:16.51:0,17,77	0/1:13,7:20:48.28:153,0,48	0/0:21,0:21:57.10:0,57,769	0/0:20,0:20:35.37:0,35,212	0/1:9,0:9:0.58:1,0,31	0/0:9,0:9:18.84:0,19,82	0/0:6,0:6:14.23:0,14,89	0/0:16,0:16:33.19:0,33,159	0/0:19,0:19:48.13:0,48,621	1/1:2,9:11:27.09:157,27,0	0/0:18,0:18:15.21:0,15,244	0/0:19,0:19:57.14:0,57,726	0/0:17,0:17:42.09:0,42,536	0/0:7,0:7:15.04:0,15,190	0/0:24,0:24:56.19:0,56,727	0/0:16,1:17:8.46:0,8,108	0/0:10,1:11:5.26:0,5,93	0/1:11,1:12:5.24:5,0,48	0/0:15,0:15:36.10:0,36,459	0/0:22,0:22:42.10:0,42,522	0/0:23,0:23:57.97:0,58,735	1/1:3,3:6:7.79:56,8,0
chr10	96055011	.	C	CACACACA	16223.39	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=6.121;DP=456;FS=0.801;HRun=0;HaplotypeScore=140.1639;InbreedingCoeff=0.9711;MQ=62.52;MQ0=1;MQRankSum=-14.217;QD=71.78;ReadPosRankSum=0.693;VQSLOD=4.9736;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:33:75.21:2213,75,0	0/0:3,0:3:6.02:0,6,168	0/0:12,0:11:32.56:0,33,628	0/0:12,0:11:33.09:0,33,653	0/0:17,0:17:36.11:0,36,796	1/1:8,8:16:36.11:1237,36,0	1/1:9,5:13:30.05:883,30,0	1/1:24,7:32:84.76:2467,85,0	0/0:21,0:21:57.20:0,57,1565	1/1:13,10:25:60.17:1921,60,0	1/1:4,6:10:18.06:664,18,0	1/1:2,6:9:21.07:774,21,0	1/1:3,3:7:9.01:358,9,0	1/1:0,12:15:33.11:1311,33,0	0/0:19,0:19:48.13:0,48,1167	1/1:4,0:13:28.57:901,29,0	0/0:17,0:17:27.09:0,27,675	0/0:20,0:20:54.16:0,54,1337	0/0:17,0:17:45.14:0,45,1108	0/0:8,0:8:15.05:0,15,412	0/0:24,0:24:58.82:0,59,1476	1/1:6,12:20:42.60:1472,43,0	1/1:4,4:9:18.02:590,18,0	1/1:6,6:16:27.08:948,27,0	0/0:16,0:16:39.11:0,39,960	0/0:21,0:21:45.14:0,45,1099	0/0:23,0:23:57.03:0,57,1500	1/1:4,2:7:18.06:485,18,0
chr10	96055045	.	T	TG	4665.09	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-1.357;DP=515;FS=2.771;HRun=7;HaplotypeScore=92.2703;InbreedingCoeff=0.9890;MQ=69.55;MQ0=3;MQRankSum=-4.631;QD=24.30;ReadPosRankSum=-1.605;VQSLOD=4.3897;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:65.79:0,66,585	0/0:9,0:9:24.03:0,24,227	0/0:25,0:16:13.98:0,14,241	0/0:25,0:19:14.08:0,14,170	0/0:28,0:28:81.08:0,81,762	1/1:5,12:17:30.09:362,30,0	1/1:2,11:13:27.08:326,27,0	1/1:9,22:31:66.15:763,66,0	0/0:17,0:17:48.05:0,48,453	1/1:5,22:27:66.17:762,66,0	1/1:1,15:16:32.96:361,33,0	1/1:4,4:8:15.03:168,15,0	1/1:12,1:13:23.99:233,24,0	1/1:1,6:7:21.06:251,21,0	0/0:19,0:19:57.08:0,57,546	0/0:8,0:8:21.03:0,21,202	0/0:26,0:26:63.02:0,63,587	0/0:21,0:21:63.04:0,63,596	0/0:20,0:20:48.03:0,48,451	0/0:15,0:15:42:0,42,382	0/0:16,0:16:42.04:0,42,394	1/1:5,16:21:45.09:520,45,0	1/1:3,11:14:30.09:361,30,0	1/1:2,12:14:29.96:341,30,0	0/0:25,0:25:48.02:0,48,450	0/0:21,0:21:48.02:0,48,444	0/0:19,0:19:50.93:0,51,461	1/1:1,10:11:18.06:217,18,0
chr10	96056100	.	T	TTCCAC	4907.14	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.162;DP=550;FS=1.755;HRun=0;HaplotypeScore=122.6324;InbreedingCoeff=0.9508;MQ=78.61;MQ0=0;MQRankSum=-10.691;QD=79.15;ReadPosRankSum=-0.466;VQSLOD=6.6591;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:28:68.92:2129,69,0	0/0:1,0:1:3.01:0,3,70	0/0:19,0:19:54.19:0,54,1190	0/0:15,0:13:27.09:0,27,597	0/0:27,0:27:78.27:0,78,1784	0/0:15,0:15:45.15:0,45,1049	0/0:37,0:37:99:0,108,2489	1/1:2,12:17:45.09:1238,45,0	0/0:17,0:17:51.18:0,51,1182	0/0:16,0:16:45.15:0,45,1047	0/0:16,0:16:45.15:0,45,1048	0/0:17,0:17:48.14:0,48,1070	0/0:18,0:18:54.19:0,54,1254	0/0:18,0:18:54.19:0,54,1253	0/0:12,0:12:36.12:0,36,839	1/1:0,8:8:24.08:776,24,0	0/0:31,0:31:90.28:0,90,1955	0/0:36,0:36:99:0,108,2517	0/0:23,0:23:69.19:0,69,1514	0/0:14,0:14:42.14:0,42,979	0/0:55,0:55:99:0,166,3797	0/0:11,0:11:30.10:0,30,699	0/0:8,0:8:24.08:0,24,559	0/0:32,0:32:90.31:0,90,2030	0/0:11,0:11:33.11:0,33,750	0/0:19,0:19:57.19:0,57,1286	0/0:20,0:20:60.21:0,60,1397	1/1:0,8:9:24.08:765,24,0
chr10	96056656	.	T	TTG	1611.76	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-6.234;DP=468;FS=21.331;HRun=0;HaplotypeScore=85.2556;InbreedingCoeff=0.4156;MQ=69.03;MQ0=2;MQRankSum=0.154;QD=5.70;ReadPosRankSum=-1.752;VQSLOD=1.0733;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:39.84:0,40,199	0/0:3,0:3:3.01:0,3,37	0/1:18,0:13:11.09:11,0,135	0/0:21,0:12:12.02:0,12,128	0/1:15,0:15:21.97:22,0,45	1/1:9,8:16:23.97:330,24,0	1/1:12,9:21:14.95:240,15,0	0/1:17,0:17:48.93:103,0,49	0/0:14,0:14:25.81:0,26,93	1/1:2,3:5:8.99:95,9,0	1/1:3,0:3:2.90:16,3,0	1/1:8,6:14:6.02:96,6,0	1/1:7,6:13:6.02:96,6,0	1/1:11,0:11:11.81:115,12,0	0/0:13,0:13:14.98:0,15,148	0/0:13,0:13:22.71:0,23,116	0/0:25,0:25:37.87:0,38,523	0/0:24,0:24:36.02:0,36,377	0/1:11,0:11:0:0,0,0	0/0:10,0:10:14.47:0,14,47	0/1:60,0:60:80.44:80,0,125	1/1:5,0:5:2.90:17,3,0	1/1:5,4:9:3.01:48,3,0	1/1:24,14:37:23.82:361,24,0	0/0:11,0:11:15.66:0,16,50	0/1:23,0:23:9.95:159,0,10	0/0:22,0:22:12.40:0,12,106	0/1:3,0:3:9.10:9,0,9
chr10	96056667	.	TGTGG	T	1264.21	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-3.484;DP=454;FS=10.808;HRun=0;HaplotypeScore=88.7204;InbreedingCoeff=0.3889;MQ=67.71;MQ0=3;MQRankSum=-0.244;QD=13.74;ReadPosRankSum=0.352;VQSLOD=2.4886;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:30:45.15:863,45,0	0/0:2,0:2:3.01:0,3,81	0/0:19,0:13:23.44:0,23,395	0/0:21,0:12:26.81:0,27,389	0/1:18,0:17:11.09:11,0,464	0/0:18,0:17:45:0,45,607	0/0:23,0:22:44.32:0,44,529	0/1:21,0:21:51.14:51,0,482	0/0:13,0:13:15.80:0,16,586	0/0:5,0:5:14.95:0,15,151	0/0:2,0:2:6.02:0,6,121	0/0:14,0:14:18.01:0,18,218	0/0:13,0:13:23.96:0,24,259	0/0:11,0:11:18.89:0,19,245	0/0:17,0:17:20.82:0,21,365	1/1:1,11:12:23.92:466,24,0	0/0:25,0:25:57.61:0,58,1145	0/0:24,0:24:48.08:0,48,880	0/0:4,0:4:11.98:0,12,101	0/1:11,0:11:10.85:11,0,377	0/0:50,0:50:99:0,135,1911	0/0:5,0:5:2.99:0,3,53	0/0:6,0:6:5.96:0,6,78	0/0:35,0:33:56.43:0,56,762	0/0:12,0:12:8.96:0,9,410	0/0:21,0:21:28.70:0,29,569	0/0:18,0:18:24.83:0,25,753	0/0:4,0:4:8.54:0,9,125
chr10	96056668	.	GT	G	341.46	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.040;DP=455;FS=5.152;HRun=1;HaplotypeScore=76.4304;InbreedingCoeff=0.7134;MQ=66.74;MQ0=3;MQRankSum=-2.679;QD=8.76;ReadPosRankSum=2.026;VQSLOD=1.3453;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:41.65:295,42,0	0/0:4,0:4:2.97:0,3,40	0/0:18,0:12:16.54:0,17,225	0/0:21,0:12:26.88:0,27,257	0/0:19,0:18:47.15:0,47,455	0/0:18,0:17:14.05:0,14,236	0/0:21,1:21:32.07:0,32,232	0/0:20,0:20:48.58:0,49,437	0/0:14,0:14:41.18:0,41,443	0/0:5,0:5:11.91:0,12,90	0/0:3,0:3:6:0,6,69	0/0:15,0:15:14.70:0,15,105	0/0:14,0:14:23.73:0,24,170	0/0:15,1:16:18.67:0,19,136	0/0:11,5:16:17.74:0,18,192	1/1:11,1:12:23.63:166,24,0	0/0:26,0:26:53.17:0,53,598	0/0:20,3:23:35.94:0,36,408	0/0:4,0:4:11.60:0,12,89	0/0:11,0:11:32.48:0,32,331	0/0:47,0:47:99:0,135,1464	0/0:5,0:5:2.97:0,3,30	0/0:5,0:5:5.89:0,6,38	0/0:37,0:35:40.91:0,41,335	0/0:12,0:12:35.65:0,36,376	0/0:20,0:20:50.28:0,50,496	0/0:17,0:17:47.71:0,48,543	0/0:4,0:4:12:0,12,120
chr10	96057598	.	TCG	T	1844.92	PASS	AB=0.959;AC=19;AF=0.339;AN=56;BaseQRankSum=10.483;DP=587;FS=4.482;HRun=0;HaplotypeScore=93.6438;InbreedingCoeff=0.4101;MQ=69.81;MQ0=11;MQRankSum=-0.289;QD=7.07;ReadPosRankSum=1.631;VQSLOD=2.8160;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:25:2.89:194,3,0	0/0:10,0:10:27.07:0,27,474	0/0:29,0:22:62.97:0,63,1163	0/0:28,0:15:35.52:0,36,556	0/0:15,0:15:45.06:0,45,723	0/1:32,0:32:44.08:44,0,53	0/1:18,0:18:6.43:6,0,46	1/1:25,0:23:65.39:492,65,0	0/0:20,0:20:39.09:0,39,656	1/1:18,0:18:48.91:361,49,0	0/1:15,0:15:28.53:57,0,29	0/1:17,2:18:25.05:66,0,25	0/1:14,1:15:32.55:37,0,33	0/1:14,1:15:6.65:198,0,7	0/0:28,0:28:66.13:0,66,1169	0/0:18,0:18:5.72:0,6,45	0/0:20,0:20:30.10:0,30,539	0/0:17,0:17:45.01:0,45,828	0/0:24,0:24:66.49:0,66,996	0/0:23,0:23:56.28:0,56,1073	0/0:35,0:35:87.17:0,87,1535	0/1:13,1:14:5.28:5,0,64	1/1:13,1:13:9.38:66,9,0	1/1:29,1:29:5.68:170,6,0	0/0:15,0:15:35.96:0,36,657	0/0:26,0:26:78.26:0,78,1513	0/0:18,0:18:50.74:0,51,958	1/1:19,0:17:44.67:331,45,0
chr10	96057599	.	CGT	C	4459.15	PASS	AB=0.517;AC=25;AF=0.463;AN=54;BaseQRankSum=4.846;DP=579;FS=9.373;HRun=0;HaplotypeScore=84.3096;InbreedingCoeff=0.8644;MQ=67.33;MQ0=12;MQRankSum=-0.187;QD=16.95;ReadPosRankSum=-1.234;VQSLOD=3.8427;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:27:53.22:635,53,0	0/0:10,0:10:24.04:0,24,331	0/0:26,0:19:55.05:0,55,902	0/0:28,0:15:31.88:0,32,474	0/0:13,0:13:36.03:0,36,542	1/1:30,0:30:12.02:119,12,0	1/1:18,0:18:3.01:36,3,0	1/1:3,22:23:66.19:933,66,0	0/0:20,0:20:36.11:0,36,565	1/1:0,18:18:51.13:673,51,0	0/1:1,13:15:8.96:206,0,9	1/1:19,0:18:5.53:116,6,0	1/1:15,0:15:8.68:104,9,0	1/1:16,0:16:33.05:455,33,0	0/0:28,0:28:59.92:0,60,878	./.	0/0:20,0:20:30.10:0,30,472	0/0:16,0:16:45.15:0,45,718	0/0:21,0:21:56.89:0,57,797	0/0:23,0:23:52.18:0,52,846	0/0:34,0:34:78.24:0,78,1167	1/1:15,0:15:8.84:76,9,0	1/1:2,12:13:11.52:143,12,0	1/1:3,27:29:24.07:322,24,0	0/0:15,0:15:32.97:0,33,522	0/0:25,0:25:75.25:0,75,1289	0/0:21,0:20:36.83:0,37,766	1/1:18,0:17:45.15:642,45,0
chr10	96057601	.	TGTTC	T	4209.68	PASS	AB=0.984;AC=24;AF=0.444;AN=54;BaseQRankSum=3.957;DP=565;FS=7.826;HRun=0;HaplotypeScore=99.0980;InbreedingCoeff=0.7767;MQ=64.69;MQ0=12;MQRankSum=1.140;QD=16.38;ReadPosRankSum=-0.266;VQSLOD=2.1637;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:24:56.66:639,57,0	0/0:9,0:9:24.06:0,24,343	0/0:26,0:19:55.05:0,55,902	0/0:25,0:12:31.98:0,32,474	0/0:12,0:12:36.10:0,36,646	1/1:1,29:29:12.04:250,12,0	1/1:1,16:17:5.81:69,6,0	1/1:26,0:24:66.67:934,67,0	0/0:20,0:20:36.11:0,36,679	1/1:19,0:19:41.33:504,41,0	0/1:15,0:15:6.11:185,0,6	1/1:5,1:16:1.95:199,2,0	1/1:3,11:15:8.51:142,9,0	1/1:15,0:15:32.90:455,33,0	0/0:26,0:26:58.36:0,58,850	./.	0/0:20,0:20:30.10:0,30,497	0/0:17,0:17:45.15:0,45,841	0/0:19,0:19:56.90:0,57,804	0/0:24,0:24:57.73:0,58,914	0/0:35,0:35:84.23:0,84,1267	1/1:2,10:12:8.73:85,9,0	1/1:14,0:13:4.93:25,5,0	0/1:29,1:29:38.39:83,0,38	0/0:15,0:15:38.03:0,38,588	0/0:25,0:25:75.25:0,75,1423	0/0:20,0:19:54.12:0,54,844	1/1:20,0:19:45.08:639,45,0
chr10	96057603	.	T	TTC	513.92	PASS	AB=0.946;AC=25;AF=0.463;AN=54;BaseQRankSum=-2.115;DP=606;FS=11.982;HRun=0;HaplotypeScore=123.2666;InbreedingCoeff=0.4321;MQ=61.44;MQ0=15;MQRankSum=-1.179;QD=1.41;ReadPosRankSum=-1.889;VQSLOD=1.2804;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:27:3.96:15,4,0	0/0:8,0:8:0.47:0,0,1	./.	0/1:24,0:11:0:0,0,0	0/0:14,0:14:11.86:0,12,109	0/0:31,0:29:8.95:0,9,42	0/0:17,0:17:3.48:0,3,33	1/1:29,0:27:6.19:30,6,0	0/1:11,7:21:32.56:33,0,65	0/0:23,0:23:10.88:0,11,62	0/1:15,0:16:2.77:6,0,3	0/0:16,0:16:6.62:0,7,30	0/0:15,0:15:1.52:0,2,9	0/1:14,0:14:0:0,0,0	0/0:17,0:27:11.19:0,11,56	0/1:19,0:19:0:0,0,0	1/1:11,10:23:3.01:44,3,0	0/1:20,0:20:35.57:202,0,36	1/1:22,0:21:3.94:29,4,0	1/1:26,0:26:4.24:28,4,0	1/1:36,0:36:9.36:95,9,0	0/1:12,0:12:0.07:0,0,0	0/0:17,0:16:12.75:0,13,70	0/0:34,0:32:23.45:0,23,162	0/0:14,0:14:5.70:0,6,49	1/1:26,0:26:12.75:96,13,0	1/1:22,0:21:10.98:86,11,0	1/1:25,0:23:0.88:2,1,0
chr10	96057647	.	T	TTC	244.81	PASS	AB=0.919;AC=8;AF=0.143;AN=56;BaseQRankSum=1.605;DP=611;FS=17.205;HRun=0;HaplotypeScore=112.3296;InbreedingCoeff=0.2793;MQ=64.88;MQ0=22;MQRankSum=-0.932;QD=2.40;ReadPosRankSum=-2.358;VQSLOD=0.9309;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,12:22:26.28:32,0,26	0/1:12,0:12:7.43:7,0,151	0/0:30,0:15:14.05:0,14,179	0/0:57,0:20:7.85:0,8,197	0/0:18,0:18:30.06:0,30,344	0/0:20,0:18:30.02:0,30,339	0/0:25,0:25:53.89:0,54,613	1/1:19,0:18:7.98:59,8,0	0/0:23,0:23:28.52:0,29,378	0/0:18,0:17:22.55:0,23,235	0/0:20,0:20:11.81:0,12,133	0/0:25,0:24:44.66:0,45,535	0/0:19,0:19:21.65:0,22,211	0/0:13,0:12:33.02:0,33,379	0/0:28,0:27:50.63:0,51,564	0/1:16,0:16:12.66:257,0,13	0/0:26,0:26:26.48:0,26,440	0/0:25,0:25:39.56:0,40,419	0/0:13,0:12:12.02:0,12,133	0/0:7,0:7:8.73:0,9,69	0/0:25,0:24:24.81:0,25,250	0/0:19,0:19:38.56:0,39,425	0/0:16,0:16:23.87:0,24,287	0/0:48,0:45:97.24:0,97,1069	0/0:21,0:20:37.81:0,38,405	0/1:17,0:17:3.10:3,0,205	0/0:11,0:10:14.85:0,15,157	1/1:13,0:13:0.47:1,0,0
chr10	96058266	.	T	TA	5735.56	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=2.558;DP=565;FS=1.539;HRun=10;HaplotypeScore=69.3523;InbreedingCoeff=0.9750;MQ=66.71;MQ0=0;MQRankSum=0.839;QD=23.41;ReadPosRankSum=-0.187;VQSLOD=5.4865;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:91.92:0,92,744	0/0:5,0:5:8.96:0,9,71	0/0:10,0:9:12.69:0,13,84	0/0:6,0:6:7.95:0,8,52	0/0:23,0:23:53.91:0,54,443	1/1:1,18:19:42.11:448,42,0	1/1:3,18:21:51.13:544,51,0	1/1:5,11:17:35.87:347,36,0	0/0:19,0:19:50.91:0,51,415	1/1:2,20:22:57.11:592,57,0	1/1:2,18:20:31.94:477,32,0	1/1:1,24:25:69.17:736,69,0	1/1:3,13:16:32.88:340,33,0	1/1:8,13:21:17.42:378,17,0	0/0:15,0:15:35.94:0,36,296	0/0:18,0:18:53.91:0,54,440	0/0:39,0:39:99:0,102,834	0/0:20,0:20:50.86:0,51,409	0/0:11,0:11:26.95:0,27,222	0/0:23,0:23:62.93:0,63,517	0/0:17,0:17:35.93:0,36,296	1/1:5,18:23:48.12:512,48,0	1/1:5,19:24:48.59:513,49,0	1/1:3,11:16:16.78:355,17,0	0/0:25,0:25:62.90:0,63,516	0/0:36,0:36:83.87:0,84,688	0/0:21,0:21:50.88:0,51,414	1/1:1,19:21:47.95:494,48,0
chr10	96059170	.	TG	T	5417.67	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=11.165;DP=535;FS=1.137;HRun=3;HaplotypeScore=51.3778;InbreedingCoeff=0.9798;MQ=86.48;MQ0=0;MQRankSum=-2.212;QD=33.03;ReadPosRankSum=2.763;VQSLOD=5.1389;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,1784	0/0:5,0:5:15.05:0,15,216	0/0:18,0:18:51.14:0,51,694	0/0:21,0:21:58.30:0,58,816	0/0:12,0:12:36.12:0,36,517	1/1:0,14:14:39.12:483,39,0	1/1:0,27:27:63.20:781,63,0	0/0:19,0:19:48.14:0,48,658	0/0:17,0:17:51.17:0,51,726	1/1:0,18:18:54.16:657,54,0	1/1:1,3:4:9.03:112,9,0	1/1:1,20:21:54.17:670,54,0	1/1:0,11:11:33.10:409,33,0	1/1:0,25:25:69.22:855,69,0	0/0:15,0:15:42.13:0,42,588	0/0:23,0:23:66.21:0,66,931	0/0:37,0:37:99:0,111,1577	0/0:34,0:34:99:0,102,1427	0/0:13,0:13:39.13:0,39,562	0/0:9,0:9:27.09:0,27,389	0/0:33,0:33:99:0,99,1422	1/1:0,12:12:27.08:335,27,0	1/1:0,3:3:9.03:112,9,0	1/1:1,28:29:81.25:1004,81,0	0/0:15,0:15:45.13:0,45,626	0/0:18,0:18:54.18:0,54,778	0/0:28,0:28:84.27:0,84,1185	0/0:10,0:10:30.07:0,30,393
chr10	96110240	.	CA	C	424.04	PASS	AB=0.771;AC=12;AF=0.214;AN=56;BaseQRankSum=-1.601;DP=555;FS=0.000;HRun=17;HaplotypeScore=120.8558;InbreedingCoeff=0.1659;MQ=71.06;MQ0=2;MQRankSum=4.617;QD=2.15;ReadPosRankSum=3.647;VQSLOD=-0.4034;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:36,1:38:65.25:65,0,235	1/1:3,2:5:2.87:17,3,0	0/0:32,0:20:23.40:0,23,153	0/0:30,0:24:14.39:0,14,91	0/1:10,11:24:5.53:99,0,6	0/0:16,0:17:30.25:0,30,168	0/0:10,0:14:21.60:0,22,107	0/0:17,0:17:5.26:0,5,109	0/0:15,0:16:33.61:0,34,182	0/0:22,0:22:38.45:0,38,222	0/0:11,0:11:24.94:0,25,125	0/0:18,0:19:44.63:0,45,237	0/0:23,0:22:40.72:0,41,243	0/0:16,0:16:28.29:0,28,155	0/1:14,2:18:0.96:73,0,1	0/0:20,0:21:12.96:0,13,172	0/0:24,0:26:30.53:0,31,298	0/0:23,1:25:33.23:0,33,299	0/1:20,0:21:46.95:49,0,47	0/1:11,8:21:57.07:74,0,57	0/1:4,3:7:10.77:11,0,18	0/0:5,0:5:5.37:0,5,24	0/0:16,0:22:38.19:0,38,186	0/0:14,0:18:8.15:0,8,43	1/1:19,3:23:20.67:113,21,0	0/1:17,4:22:35.82:36,0,48	0/1:7,9:17:22.99:41,0,23	0/0:22,0:22:14.02:0,14,171
chr10	96110725	.	GC	G	1149.56	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.149;DP=575;FS=12.007;HRun=2;HaplotypeScore=58.4929;InbreedingCoeff=0.9904;MQ=85.99;MQ0=0;MQRankSum=-1.821;QD=32.84;ReadPosRankSum=-1.621;VQSLOD=1.9373;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:81.19:0,81,1166	0/0:11,0:11:30.10:0,30,449	0/0:22,0:21:53.65:0,54,693	0/0:19,0:19:48.05:0,48,652	0/0:22,0:22:66.20:0,66,948	0/0:25,0:25:75.14:0,75,1062	0/0:15,0:15:45.11:0,45,649	1/1:2,25:27:75.23:959,75,0	0/0:18,0:18:54.09:0,54,743	0/0:34,0:34:99:0,99,1442	0/0:14,0:14:42.14:0,42,629	0/0:12,0:12:36.09:0,36,510	0/0:5,0:5:15.05:0,15,223	0/0:20,0:20:57.15:0,57,792	0/0:22,0:22:63.20:0,63,921	0/0:18,0:18:54.18:0,54,809	0/0:38,0:38:99:0,111,1578	0/0:20,0:20:60.18:0,60,859	0/0:12,0:12:33.08:0,33,454	0/0:26,0:26:75.25:0,75,1115	0/0:27,0:27:78.25:0,78,1148	0/0:15,0:15:45.15:0,45,674	0/0:25,0:25:74.88:0,75,1025	0/0:20,0:20:57.17:0,57,815	0/0:19,0:19:57.19:0,57,854	0/0:24,0:24:71.86:0,72,1001	0/0:24,0:24:72.21:0,72,1035	1/1:0,8:8:24.08:311,24,0
chr10	96112326	.	A	AGT	1206.09	PASS	AB=0.815;AC=40;AF=0.769;AN=52;BaseQRankSum=1.663;DP=570;FS=10.857;HRun=0;HaplotypeScore=100.1847;InbreedingCoeff=0.3111;MQ=67.27;MQ0=14;MQRankSum=-2.466;QD=3.13;ReadPosRankSum=-0.757;VQSLOD=1.4753;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,16:32:54.97:82,0,55	1/1:4,0:3:2.99:24,3,0	0/0:60,0:24:9.91:0,10,99	0/0:56,0:30:19.18:0,19,177	1/1:21,0:20:11.74:81,12,0	./.	0/1:35,0:34:2.48:29,0,2	1/1:39,0:35:9.97:127,10,0	1/1:4,0:15:3:26,3,0	1/1:32,0:30:27.35:186,27,0	1/1:11,0:11:2.99:24,3,0	1/1:14,0:14:5.22:27,5,0	1/1:16,0:15:12.59:75,13,0	1/1:13,0:12:2.52:23,3,0	1/1:17,0:17:5.94:46,6,0	0/1:5,11:16:12.03:241,0,12	0/0:21,0:21:39.05:0,39,415	0/0:8,0:12:11.80:0,12,102	1/1:13,0:13:8.46:54,8,0	1/1:8,0:7:3.47:26,3,0	./.	1/1:16,0:14:2.71:25,3,0	1/1:9,0:8:0.47:1,0,0	0/1:21,0:19:18.22:40,0,18	1/1:11,0:10:2.54:24,3,0	1/1:19,0:18:20.77:150,21,0	1/1:19,0:20:6.42:45,6,0	1/1:3,0:2:1.55:4,2,0
chr10	96112352	.	TGA	T	557.22	PASS	AB=0.982;AC=23;AF=0.460;AN=50;BaseQRankSum=0.041;DP=499;FS=0.000;HRun=0;HaplotypeScore=98.8747;InbreedingCoeff=0.4601;MQ=41.05;MQ0=14;MQRankSum=0.913;QD=2.13;ReadPosRankSum=0.868;VQSLOD=1.5908;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:16.68:17,0,105	./.	1/1:24,0:7:0.47:1,0,0	./.	1/1:19,1:19:12.01:129,12,0	1/1:12,1:13:3.01:33,3,0	0/0:27,0:27:15.03:0,15,186	0/0:33,0:29:7.38:0,7,90	0/0:12,0:11:11.50:0,12,102	0/1:27,0:30:25.17:25,0,225	0/0:13,0:14:12.03:0,12,146	0/0:18,0:19:18.46:0,18,233	0/0:15,0:16:9.43:0,9,73	0/0:13,0:12:2.75:0,3,44	1/1:11,1:16:5.84:47,6,0	0/1:20,0:20:47.10:47,0,148	0/0:18,0:19:18.46:0,18,189	0/0:11,0:11:6.47:0,6,54	1/1:7,5:11:17.07:138,17,0	1/1:7,3:10:0.47:1,0,0	0/1:15,0:13:0:0,0,0	0/1:13,0:13:0:0,0,0	0/0:12,0:11:9.01:0,9,101	0/0:23,0:21:14.93:0,15,156	1/1:13,0:13:8.86:77,9,0	1/1:23,0:22:3.73:119,4,0	1/1:12,1:13:8.27:81,8,0	./.
chr10	96115145	.	TA	T	1944.71	PASS	AB=0.889;AC=23;AF=0.411;AN=56;BaseQRankSum=7.843;DP=383;FS=6.925;HRun=12;HaplotypeScore=54.6889;InbreedingCoeff=0.8685;MQ=66.10;MQ0=4;MQRankSum=-2.205;QD=15.31;ReadPosRankSum=2.205;VQSLOD=4.5171;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:25:27.87:0,28,462	0/1:7,1:8:2.19:2,0,162	0/0:17,0:12:23.88:0,24,197	0/0:16,0:10:12.92:0,13,88	0/0:23,0:22:33.05:0,33,328	1/1:2,15:17:44.76:342,45,0	1/1:1,13:14:32.87:255,33,0	0/0:31,0:28:63.10:0,63,626	1/1:1,5:6:11.95:93,12,0	1/1:2,15:17:44.83:348,45,0	1/1:3,16:19:14.42:294,14,0	1/1:1,12:13:29.89:232,30,0	1/1:1,14:16:27.09:311,27,0	1/1:1,7:7:20.92:162,21,0	0/0:7,0:7:15.03:0,15,152	0/0:7,0:7:9.02:0,9,91	0/0:22,0:23:59.94:0,60,586	0/0:11,0:11:30.05:0,30,298	0/0:16,0:16:40.12:0,40,371	0/0:8,0:9:26.64:0,27,253	0/0:11,0:11:21.01:0,21,204	1/1:0,1:1:2.99:23,3,0	1/1:3,3:6:8.96:70,9,0	1/1:1,1:1:2.99:23,3,0	0/0:11,0:11:21.04:0,21,213	0/0:21,0:20:49.34:0,49,490	0/0:19,0:20:44.87:0,45,429	0/0:7,0:7:15.03:0,15,151
chr10	96115317	.	AG	A	6057.63	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=-2.941;DP=168;FS=10.831;HRun=1;HaplotypeScore=41.4800;InbreedingCoeff=0.3061;MQ=54.15;MQ0=0;MQRankSum=-2.504;QD=37.63;ReadPosRankSum=0.225;VQSLOD=4.0757;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:36.12:501,36,0	1/1:0,4:4:9.03:125,9,0	1/1:0,1:1:3.01:42,3,0	0/0:5,2:6:5.96:0,6,97	1/1:0,6:5:15.05:209,15,0	1/1:2,4:6:15.01:187,15,0	1/1:0,1:1:3.01:42,3,0	1/1:0,16:16:48.15:655,48,0	1/1:0,2:2:6.02:84,6,0	1/1:0,9:9:27.09:376,27,0	1/1:0,6:6:18.06:250,18,0	./.	1/1:0,2:2:6.02:84,6,0	1/1:2,2:4:12.02:149,12,0	1/1:0,8:8:24.04:313,24,0	1/1:0,2:2:6.02:84,6,0	1/1:0,10:9:24.04:313,24,0	1/1:0,4:4:12.04:167,12,0	1/1:2,14:15:42.14:572,42,0	1/1:0,3:3:9.03:125,9,0	1/1:0,6:6:12.04:167,12,0	1/1:0,2:2:6.02:84,6,0	1/1:0,4:4:9.03:125,9,0	1/1:1,2:3:6.01:68,6,0	1/1:1,12:13:39.13:543,39,0	1/1:0,8:8:24.08:334,24,0	1/1:0,1:1:3.01:42,3,0	1/1:0,11:11:30.10:415,30,0
chr10	96115783	.	AGAAG	A	2969.62	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-4.459;DP=478;FS=2.860;HRun=0;HaplotypeScore=104.8814;InbreedingCoeff=0.1454;MQ=72.21;MQ0=3;MQRankSum=0.569;QD=10.76;ReadPosRankSum=2.677;VQSLOD=3.0080;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:30:99:164,0,222	0/0:4,0:4:5.95:0,6,71	0/0:16,0:15:18.66:0,19,214	0/0:21,0:21:37.91:0,38,406	0/0:14,0:14:30.01:0,30,294	0/1:18,0:18:99:185,0,151	1/1:19,0:19:28.05:362,28,0	1/1:20,0:19:47.98:429,48,0	0/1:12,0:12:89.74:112,0,90	1/1:2,16:17:51.06:595,51,0	1/1:10,1:11:20.93:171,21,0	1/1:2,17:19:11.91:171,12,0	0/1:16,0:16:92.91:172,0,93	0/1:14,0:13:84.08:142,0,84	0/0:18,0:18:5.81:0,6,65	0/1:17,0:17:56.98:57,0,188	0/0:37,0:37:82.98:0,83,1469	0/0:26,0:26:68.81:0,69,895	0/0:14,0:11:26.80:0,27,281	0/1:18,0:18:15.10:15,0,449	0/1:12,0:12:23.04:23,0,121	0/1:11,0:11:73.03:135,0,73	0/1:7,0:7:31.36:83,0,31	0/1:30,0:30:99:275,0,272	0/0:14,0:15:15.05:0,15,263	0/0:20,0:20:54.03:0,54,567	0/0:17,0:17:17.93:0,18,387	1/1:3,0:3:8.96:69,9,0
chr10	96115791	.	G	GGAAGGAAA	4068.12	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-6.694;DP=469;FS=0.921;HRun=0;HaplotypeScore=137.3530;InbreedingCoeff=0.9219;MQ=66.72;MQ0=3;MQRankSum=-0.186;QD=29.69;ReadPosRankSum=-3.207;VQSLOD=3.0479;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:31:65.32:0,65,887	1/1:0,3:4:3.01:131,3,0	0/0:13,0:12:8.43:0,8,167	0/0:16,0:17:31.94:0,32,328	1/1:12,0:12:30.44:310,30,0	0/0:16,0:16:39.58:0,40,512	0/0:19,0:19:26.88:0,27,324	0/0:20,0:19:38.89:0,39,332	0/0:10,0:10:29.96:0,30,391	0/0:19,0:18:47.52:0,48,529	0/0:11,0:11:29.72:0,30,225	0/0:17,0:17:10.27:0,10,114	0/0:17,0:17:18.01:0,18,496	0/0:13,0:12:31.09:0,31,422	1/1:0,14:19:6.02:236,6,0	0/0:9,0:18:36.02:0,36,509	0/0:34,0:34:96.04:0,96,1480	0/0:26,0:26:52.26:0,52,875	1/1:14,0:11:23.96:299,24,0	1/1:18,0:18:51.09:644,51,0	1/1:13,0:13:32.91:269,33,0	0/0:12,0:12:25.38:0,25,314	0/0:6,0:6:15.03:0,15,209	0/0:29,0:29:49.73:0,50,877	1/1:1,20:21:15.05:556,15,0	1/1:3,12:20:43.07:1130,43,0	1/1:16,0:16:44.96:493,45,0	0/0:3,0:3:8.97:0,9,71
chr10	96115862	.	ACAGGCAGGCAGGCAGG	A	3456.22	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=6.657;DP=406;FS=0.567;HRun=0;HaplotypeScore=186.6935;InbreedingCoeff=0.6203;MQ=55.79;MQ0=3;MQRankSum=-6.427;QD=21.20;ReadPosRankSum=0.147;VQSLOD=2.7574;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:38.41:0,38,918	0/1:6,0:6:1.41:1,0,82	0/0:15,0:6:2.98:0,3,62	0/1:18,0:10:0.02:0,0,172	0/0:10,0:10:3.61:0,4,78	1/1:10,0:8:9:137,9,0	1/1:23,0:22:36.03:594,36,0	0/0:9,0:8:6.02:0,6,91	1/1:9,0:8:18.06:462,18,0	1/1:10,0:9:3.01:80,3,0	1/1:4,8:12:15.05:257,15,0	1/1:17,0:14:29.99:695,30,0	1/1:15,0:15:24.08:584,24,0	1/1:12,0:11:17.95:254,18,0	0/0:19,0:18:25.75:0,26,422	0/0:16,0:16:30.10:0,30,821	0/0:24,0:24:51.18:0,51,2066	0/0:24,0:24:57.14:0,57,2034	0/0:8,0:7:6.90:0,7,84	0/0:12,0:15:3.44:0,3,69	0/0:22,0:22:18.21:0,18,275	1/1:6,0:5:3.01:59,3,0	1/1:3,0:3:3.01:80,3,0	0/1:22,0:21:49.09:253,0,49	0/0:14,0:14:9:0,9,124	0/0:18,0:17:5.58:0,6,136	0/0:14,0:14:27.60:0,28,430	0/0:5,0:4:5.98:0,6,89
chr10	96115884	.	AGGCAGGCAGGC	A	1380.45	PASS	AB=0.903;AC=14;AF=0.250;AN=56;BaseQRankSum=7.407;DP=315;FS=2.128;HRun=0;HaplotypeScore=106.9528;InbreedingCoeff=0.1255;MQ=48.78;MQ0=26;MQRankSum=-8.423;QD=11.80;ReadPosRankSum=3.082;VQSLOD=1.8410;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:41.60:0,42,936	0/0:6,0:6:16.54:0,17,119	0/0:7,0:2:4.26:0,4,71	0/0:9,0:5:9.02:0,9,201	0/0:5,0:4:8.59:0,9,61	0/1:10,1:8:34.75:35,0,52	0/1:26,0:18:10.28:210,0,10	0/0:9,0:7:21.07:0,21,302	0/1:7,2:8:0.95:261,0,1	0/1:5,0:2:26.52:52,0,27	1/1:8,1:9:3.45:69,3,0	0/1:13,4:14:72.46:404,0,72	0/1:7,5:12:22.87:324,0,23	0/1:9,0:7:22.90:53,0,23	0/0:22,0:20:49.59:0,50,499	0/0:16,0:16:36.12:0,36,783	0/0:19,0:19:54.05:0,54,2040	0/0:21,0:19:54.17:0,54,2003	0/0:9,0:8:20.58:0,21,202	0/0:5,0:4:8.92:0,9,104	0/0:22,0:16:29.09:0,29,295	1/1:2,1:2:3.01:37,3,0	1/1:1,0:1:3.01:38,3,0	0/1:14,0:13:50.38:50,0,185	0/0:5,0:4:10.60:0,11,98	0/0:7,0:5:13.71:0,14,141	0/0:13,0:12:30.85:0,31,362	0/0:4,0:3:5.95:0,6,101
chr10	96116009	.	CA	C	1356.54	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.328;DP=451;FS=6.243;HRun=2;HaplotypeScore=53.5128;InbreedingCoeff=0.9505;MQ=81.12;MQ0=0;MQRankSum=-1.344;QD=35.70;ReadPosRankSum=-1.918;VQSLOD=3.0812;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.30:0,96,1398	0/0:7,0:7:21.07:0,21,315	0/0:19,0:19:40.40:0,40,703	0/0:17,0:16:45.03:0,45,611	0/0:9,0:9:27.09:0,27,405	0/0:6,0:6:18.06:0,18,270	0/0:21,0:21:60.17:0,60,862	1/1:0,29:29:87.28:1127,87,0	0/0:17,0:17:51.17:0,51,764	0/0:9,0:9:24.08:0,24,358	0/0:3,0:3:9.03:0,9,135	0/0:19,0:19:54.17:0,54,787	0/0:15,0:15:45.15:0,45,672	0/0:21,0:20:57.16:0,57,830	0/0:26,0:26:78.25:0,78,1148	0/0:14,0:14:42.13:0,42,608	0/0:25,0:25:75.25:0,75,1124	0/0:18,0:18:51.09:0,51,714	0/0:19,0:18:54.18:0,54,808	0/0:7,0:7:18.06:0,18,265	0/0:26,0:26:72.24:0,72,1078	0/0:5,0:5:15.05:0,15,225	0/0:9,0:9:27.09:0,27,404	0/0:19,0:19:54.18:0,54,808	0/0:9,0:9:27.07:0,27,372	0/0:17,0:17:51.17:0,51,763	0/0:22,0:22:63.20:0,63,924	1/1:0,9:9:27.09:350,27,0
chr10	96116190	.	ATCTC	A	9713.81	PASS	AB=0.913;AC=27;AF=0.482;AN=56;BaseQRankSum=16.047;DP=511;FS=5.059;HRun=0;HaplotypeScore=100.8522;InbreedingCoeff=0.8970;MQ=86.35;MQ0=0;MQRankSum=-9.169;QD=43.37;ReadPosRankSum=2.084;VQSLOD=5.4285;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,163,4264	0/0:3,0:3:9.03:0,9,243	0/0:20,0:20:54.19:0,54,1330	0/0:22,0:22:54.14:0,54,1329	0/0:10,0:10:30.10:0,30,797	1/1:0,7:7:21.07:399,21,0	1/1:6,25:31:75.26:1423,75,0	1/1:3,24:27:72.25:1359,72,0	1/1:0,22:22:60.21:1134,60,0	1/1:1,11:12:33.11:626,33,0	1/1:1,3:4:9.03:171,9,0	1/1:1,16:17:45.15:854,45,0	1/1:0,11:11:30.10:570,30,0	1/1:2,23:25:60.21:1139,60,0	0/0:27,0:27:81.28:0,81,2174	0/0:17,0:17:48.16:0,48,1287	0/0:27,0:27:78.27:0,78,2057	0/0:15,0:15:39.08:0,39,936	0/0:15,0:15:39.12:0,39,965	0/0:9,0:9:27.09:0,27,727	0/0:44,0:44:99:0,132,3543	1/1:0,3:3:9.03:164,9,0	1/1:0,4:4:12.04:228,12,0	1/1:2,28:30:68.90:1310,69,0	0/0:8,0:8:24.06:0,24,567	0/1:19,2:21:53.70:54,0,1387	0/0:15,0:15:42.14:0,42,1124	1/1:4,6:10:15.05:285,15,0
chr10	96116465	.	G	GC	5571.05	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=0.963;DP=400;FS=16.374;HRun=6;HaplotypeScore=62.0200;InbreedingCoeff=0.9561;MQ=82.80;MQ0=0;MQRankSum=-2.202;QD=19.01;ReadPosRankSum=-0.043;VQSLOD=3.2130;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.15:0,84,845	1/1:2,7:9:21.07:264,21,0	0/0:11,0:11:17.90:0,18,168	0/0:17,0:15:16.52:0,17,121	1/1:1,8:9:20.71:263,21,0	1/1:0,2:14:31.32:159,31,0	1/1:3,0:14:25.57:130,26,0	1/1:6,1:34:76.86:429,77,0	1/1:4,0:19:34.12:174,34,0	1/1:0,0:4:8.63:44,9,0	1/1:1,0:6:11.40:58,11,0	1/1:0,2:10:17.08:87,17,0	1/1:0,1:13:25.60:131,26,0	1/1:2,0:7:16.88:84,17,0	1/1:0,12:12:36.12:453,36,0	0/0:18,0:18:32.16:0,32,443	0/0:23,0:23:69.16:0,69,704	0/0:9,0:9:21.04:0,21,214	1/1:2,13:15:42.13:517,42,0	1/1:2,15:17:42.13:528,42,0	1/1:0,21:21:48.15:604,48,0	1/1:2,1:13:22.68:113,23,0	1/1:1,0:10:22.76:115,23,0	1/1:4,0:18:28.24:145,28,0	1/1:1,4:6:9.03:113,9,0	1/1:0,15:15:45.14:566,45,0	1/1:3,12:16:36.11:448,36,0	1/1:1,0:11:28.41:145,28,0
chr10	96116766	.	A	ATTG	7296.54	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.341;DP=516;FS=0.817;HRun=0;HaplotypeScore=87.2034;InbreedingCoeff=0.9889;MQ=67.75;MQ0=0;MQRankSum=-3.519;QD=53.26;ReadPosRankSum=1.487;VQSLOD=7.1916;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,2257	1/1:0,3:5:9.03:216,9,0	0/0:22,0:22:57.19:0,57,1003	0/0:24,0:24:69.24:0,69,1257	1/1:0,13:15:35.91:620,36,0	0/0:12,0:12:33.10:0,33,574	0/0:24,0:24:69.21:0,69,1220	0/0:29,0:29:87.22:0,87,1489	0/0:19,0:19:48.16:0,48,888	0/0:12,0:12:36.11:0,36,592	0/0:6,0:6:18.06:0,18,331	0/0:22,0:22:63.20:0,63,1138	0/0:17,0:17:51.17:0,51,949	0/0:15,0:15:39.13:0,39,727	1/1:2,12:16:42.13:946,42,0	0/0:17,0:17:51.16:0,51,912	0/0:32,0:32:93.32:0,93,1733	0/0:20,0:20:60.16:0,60,1065	1/1:4,8:12:30.09:659,30,0	1/1:0,9:9:27.02:557,27,0	1/1:2,32:33:75.90:1418,76,0	0/0:13,0:13:36.12:0,36,658	0/0:12,0:12:33.11:0,33,615	0/0:26,0:26:78.25:0,78,1375	1/1:0,9:9:24.01:517,24,0	1/1:0,19:21:63.17:1366,63,0	1/1:0,16:15:42.14:997,42,0	0/0:16,0:16:48.16:0,48,885
chr10	96116894	.	AT	A	2045.05	PASS	AB=0.952;AC=39;AF=0.722;AN=54;BaseQRankSum=6.387;DP=329;FS=2.594;HRun=6;HaplotypeScore=63.0774;InbreedingCoeff=0.7198;MQ=82.96;MQ0=1;MQRankSum=-0.430;QD=10.71;ReadPosRankSum=0.545;VQSLOD=1.3771;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:60.11:0,60,724	1/1:1,7:8:6.01:64,6,0	0/1:19,1:17:3:3,0,97	0/0:11,0:10:2.19:0,2,43	1/1:2,2:5:5.95:50,6,0	1/1:3,5:8:17.87:174,18,0	1/1:1,12:13:21.05:225,21,0	0/0:18,0:18:47.96:0,48,450	1/1:3,0:3:8.56:44,9,0	1/1:1,6:9:9.02:96,9,0	1/1:1,0:9:4.95:23,5,0	1/1:2,5:7:3.01:32,3,0	1/1:3,4:7:12.03:130,12,0	1/1:1,3:5:9.02:96,9,0	1/1:4,7:12:20.07:197,20,0	0/0:5,0:5:6.48:0,6,65	0/0:38,0:37:88.89:0,89,1019	0/0:23,0:22:57.14:0,57,708	1/1:1,8:11:19.66:139,20,0	1/1:4,5:9:3:32,3,0	1/1:6,1:8:13.81:89,14,0	1/1:1,4:6:9.02:96,9,0	./.	1/1:2,12:13:18.04:192,18,0	1/1:0,8:9:10.97:87,11,0	1/1:4,8:12:20.62:173,21,0	1/1:3,13:16:27.07:288,27,0	0/0:10,0:10:24.06:0,24,253
chr10	96116908	.	G	GGC	923.34	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-5.374;DP=341;FS=5.553;HRun=0;HaplotypeScore=77.8150;InbreedingCoeff=0.7259;MQ=87.92;MQ0=1;MQRankSum=-2.110;QD=26.38;ReadPosRankSum=0.267;VQSLOD=4.0250;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.16:0,66,839	0/0:8,0:8:11.91:0,12,86	0/0:26,0:24:32.98:0,33,313	0/0:12,0:10:16.11:0,16,127	0/0:6,0:6:11.98:0,12,99	0/1:8,0:8:0.50:1,0,131	0/0:14,0:14:35.62:0,36,267	1/1:3,14:18:41.62:581,42,0	0/0:2,0:2:2.96:0,3,19	0/0:11,0:11:23.86:0,24,192	0/0:8,0:8:15.35:0,15,135	0/0:9,0:9:17.88:0,18,151	0/0:5,0:5:14.81:0,15,102	0/0:8,0:8:20.82:0,21,172	0/0:14,0:14:41.65:0,42,342	0/0:4,0:4:12.04:0,12,157	0/0:36,0:35:99:0,102,1322	0/0:26,0:25:72.22:0,72,973	0/0:11,0:11:26.94:0,27,217	0/0:9,0:9:23.62:0,24,206	0/0:7,0:7:21:0,21,208	0/0:10,0:10:26.93:0,27,223	0/0:8,0:8:8.26:0,8,76	0/0:12,0:11:29.81:0,30,231	0/0:8,0:8:17.19:0,17,162	0/0:12,0:12:35.25:0,35,280	0/0:13,0:13:32.74:0,33,280	1/1:0,9:9:27.09:462,27,0
chr10	96116943	.	T	TCTCTC	995.30	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-1.408;DP=387;FS=4.630;HRun=0;HaplotypeScore=119.6224;InbreedingCoeff=0.7019;MQ=57.56;MQ0=7;MQRankSum=-5.224;QD=26.19;ReadPosRankSum=0.120;VQSLOD=3.2253;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:66.11:0,66,1350	0/0:7,0:7:17.95:0,18,310	0/0:29,0:12:21.03:0,21,277	0/0:12,0:5:12.04:0,12,237	0/0:12,0:12:23.98:0,24,437	0/0:8,0:6:11.03:0,11,96	0/0:14,0:14:39.05:0,39,583	1/1:17,4:19:26.16:910,26,0	0/0:5,0:5:6.82:0,7,43	0/0:11,0:10:25.78:0,26,409	0/0:15,0:15:29.01:0,29,413	0/1:12,0:12:2.39:2,0,133	0/0:5,0:5:14.71:0,15,171	0/0:9,0:9:24.78:0,25,278	0/0:10,0:10:25.33:0,25,507	0/0:5,0:5:12.04:0,12,275	0/0:37,0:35:87.23:0,87,1821	0/0:27,0:27:70.12:0,70,1382	0/0:18,0:18:41.84:0,42,679	0/0:16,0:16:30.89:0,31,500	0/0:10,0:10:27.05:0,27,504	0/0:12,0:12:22.63:0,23,297	0/0:7,0:7:16.11:0,16,182	0/0:7,0:6:6.02:0,6,104	0/0:10,0:10:15.81:0,16,229	0/0:17,0:16:27.52:0,28,477	0/0:13,0:13:36.12:0,36,637	1/1:5,0:4:10.28:199,10,0
chr10	96117280	.	TGGGACA	T	19253.19	PASS	AB=0.957;AC=41;AF=0.732;AN=56;BaseQRankSum=13.363;DP=605;FS=7.033;HRun=0;HaplotypeScore=166.7134;InbreedingCoeff=0.8977;MQ=83.33;MQ0=0;MQRankSum=-17.785;QD=47.19;ReadPosRankSum=4.716;VQSLOD=4.4858;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,3826	1/1:1,4:5:11.99:259,12,0	0/0:21,0:21:60.19:0,60,1970	0/0:33,0:32:88.01:0,88,2633	1/1:1,13:14:17.88:442,18,0	1/1:0,19:19:51.17:1182,51,0	1/1:3,29:32:54.18:1234,54,0	0/0:32,0:32:93.30:0,93,3108	1/1:2,27:29:72.08:1698,72,0	1/1:0,16:16:48.12:1081,48,0	1/1:0,10:10:14.67:333,15,0	1/1:3,36:39:93.32:2207,93,0	1/1:0,17:17:48.15:1160,48,0	1/1:1,27:28:63.22:1512,63,0	1/1:3,29:32:72.25:1715,72,0	0/1:21,1:22:7.56:8,0,2160	0/0:32,0:32:96.32:0,96,3415	0/0:27,0:27:81.25:0,81,2821	1/1:5,12:17:30.10:717,30,0	1/1:0,9:10:21.07:517,21,0	1/1:3,22:25:23.21:589,23,0	1/1:0,15:15:24.08:554,24,0	1/1:1,9:10:15.05:333,15,0	1/1:1,9:10:8.70:221,9,0	1/1:2,9:11:18.06:407,18,0	1/1:1,23:24:66.23:1615,66,0	1/1:0,23:23:60.21:1470,60,0	0/0:9,0:9:27.09:0,27,988
chr10	96118306	.	ACG	A	1095.75	PASS	AB=0.905;AC=18;AF=0.321;AN=56;BaseQRankSum=6.061;DP=780;FS=5.985;HRun=0;HaplotypeScore=217.9932;InbreedingCoeff=0.5100;MQ=45.81;MQ0=11;MQRankSum=1.434;QD=4.07;ReadPosRankSum=-3.493;VQSLOD=1.7930;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,129,2209	0/0:20,0:19:26.39:0,26,512	0/0:22,0:5:6.42:0,6,32	0/0:47,0:14:16.61:0,17,365	0/0:36,0:35:23.47:0,23,417	1/1:18,2:20:4.91:96,5,0	0/1:26,2:28:0.20:225,0,0	0/0:35,0:30:77.32:0,77,1087	0/1:18,5:22:23.73:28,0,24	0/1:34,4:38:51.77:427,0,52	1/1:7,1:8:6:51,6,0	0/1:35,3:38:3.99:96,0,4	0/1:18,2:19:4.56:30,0,5	1/1:19,5:24:14.80:90,15,0	0/0:29,0:28:9.03:0,9,174	0/0:30,0:30:81.16:0,81,1394	0/0:29,0:29:75.07:0,75,1226	0/0:22,0:21:63.10:0,63,1037	0/1:13,1:13:22.10:22,0,396	0/0:32,0:32:38.82:0,39,690	0/0:53,0:51:38.50:0,38,618	1/1:17,1:17:10.87:70,11,0	1/1:7,3:10:5.95:44,6,0	1/1:26,2:28:18.08:98,18,0	0/0:29,0:29:27.08:0,27,488	0/0:43,0:41:73.92:0,74,1279	0/0:19,0:19:13.86:0,14,203	0/0:19,0:19:37.65:0,38,640
chr10	96118321	.	CAT	C	1197.23	PASS	AB=0.979;AC=23;AF=0.411;AN=56;BaseQRankSum=10.624;DP=946;FS=2.443;HRun=0;HaplotypeScore=252.7626;InbreedingCoeff=0.2210;MQ=38.65;MQ0=27;MQRankSum=-4.010;QD=2.77;ReadPosRankSum=-3.926;VQSLOD=2.1596;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,138,2364	0/0:30,0:29:1.46:0,1,193	0/0:52,0:7:14.90:0,15,232	0/0:80,0:15:10.10:0,10,317	0/0:41,2:42:14.60:0,15,138	1/1:20,0:20:0.94:50,1,0	0/1:28,0:28:10.59:151,0,11	0/1:43,2:35:11.57:12,0,465	0/1:25,0:23:16.05:16,0,23	0/1:38,0:37:72.79:354,0,73	1/1:12,0:12:6.14:36,6,0	1/1:39,0:39:4.92:150,5,0	0/1:22,0:21:15.22:75,0,15	1/1:27,0:27:9.62:45,10,0	0/0:36,0:35:9.01:0,9,88	0/0:29,0:29:68.76:0,69,1342	0/0:35,0:35:99:0,99,1656	0/0:22,0:21:48.60:0,49,957	0/1:12,2:12:81.83:82,0,130	0/0:35,1:36:30.01:0,30,265	0/0:56,4:58:26.79:0,27,232	1/1:17,0:16:7.87:44,8,0	1/1:12,0:12:8.95:68,9,0	1/1:26,0:25:10.11:43,10,0	0/0:40,1:41:25.24:0,25,217	0/1:55,1:53:99:172,0,563	0/1:23,0:23:11.49:74,0,11	0/1:28,0:28:3.34:3,0,294
chr10	96118323	.	T	TAC	2794.93	PASS	AB=0.962;AC=26;AF=0.464;AN=56;BaseQRankSum=2.054;DP=971;FS=0.935;HRun=0;HaplotypeScore=256.4779;InbreedingCoeff=0.3727;MQ=37.26;MQ0=29;MQRankSum=-4.353;QD=4.83;ReadPosRankSum=-1.503;VQSLOD=2.4012;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,117,1362	1/1:20,9:30:14.93:228,15,0	0/0:55,0:7:16.86:0,17,179	0/0:84,0:15:17.60:0,18,215	1/1:24,18:42:12.51:192,13,0	0/0:18,0:19:4.12:0,4,13	0/1:28,0:28:21.64:22,0,57	0/1:45,0:35:1.43:256,0,1	0/0:25,0:23:5.37:0,5,35	0/1:38,0:37:45.63:46,0,194	1/1:12,0:12:1.62:9,2,0	0/1:41,0:41:2.63:3,0,39	0/0:25,0:24:1.35:0,1,73	0/1:29,0:29:11.05:11,0,27	1/1:29,4:33:5.90:94,6,0	0/0:27,0:29:74.14:0,74,842	0/0:36,0:36:84.23:0,84,983	0/0:20,0:21:50.93:0,51,567	1/1:15,2:15:26.43:263,26,0	1/1:18,19:37:11.23:190,11,0	1/1:45,14:57:21.06:305,21,0	0/0:18,0:17:2.81:0,3,17	0/1:12,0:12:9.21:18,0,9	0/0:26,0:25:11.51:0,12,66	1/1:36,9:45:11.58:153,12,0	0/1:44,14:56:71.76:879,0,72	0/1:21,3:24:0.93:137,0,1	1/1:20,1:25:17.38:175,17,0
chr10	96118329	.	C	CAT	1099.22	PASS	AB=0.989;AC=14;AF=0.250;AN=56;BaseQRankSum=6.222;DP=1040;FS=13.970;HRun=0;HaplotypeScore=280.1150;InbreedingCoeff=-0.1770;MQ=36.63;MQ0=32;MQRankSum=-3.500;QD=2.19;ReadPosRankSum=3.345;VQSLOD=1.0252;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,141,1970	0/1:33,1:32:99:102,0,108	0/0:57,0:8:19.26:0,19,252	0/0:91,0:17:41.49:0,41,463	0/1:46,0:45:7.77:83,0,8	0/0:20,0:20:8.92:0,9,86	0/0:30,0:31:21.88:0,22,305	0/1:47,0:37:99:119,0,412	0/1:28,0:26:4.45:4,0,122	0/0:41,0:40:27.34:0,27,673	0/0:11,0:11:5.80:0,6,40	0/0:46,0:49:35.48:0,35,297	0/1:29,0:28:8.44:8,0,175	0/0:36,0:37:2.80:0,3,77	1/1:40,0:39:5.84:44,6,0	0/0:29,0:29:81.08:0,81,1152	0/0:36,0:36:93.25:0,93,1344	0/0:26,0:25:60.11:0,60,817	0/1:18,0:16:86.57:87,0,101	0/1:36,0:36:68.22:71,0,68	0/1:58,5:60:22.14:107,0,22	0/0:17,0:16:11.99:0,12,114	0/0:13,0:13:5.53:0,6,62	0/0:27,0:28:11.91:0,12,160	0/1:46,0:46:32.40:61,0,32	0/1:60,0:57:99:422,0,357	0/1:28,0:28:65.23:65,0,83	0/1:26,1:27:77.94:78,0,122
chr10	96118333	.	C	CAT	1370.55	PASS	AB=0.963;AC=14;AF=0.250;AN=56;BaseQRankSum=4.010;DP=1046;FS=13.015;HRun=0;HaplotypeScore=282.2701;InbreedingCoeff=0.1674;MQ=36.12;MQ0=31;MQRankSum=-3.281;QD=3.07;ReadPosRankSum=1.996;VQSLOD=0.7735;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,138,1948	0/1:31,0:29:59.06:87,0,59	0/0:56,0:8:20.89:0,21,241	0/0:94,0:21:37.08:0,37,491	1/1:46,0:45:12.19:98,12,0	0/0:20,0:20:8.92:0,9,87	0/0:30,0:30:16.21:0,16,259	0/1:41,6:37:99:330,0,289	0/0:32,0:30:23.82:0,24,197	0/0:44,0:43:77.28:0,77,762	0/0:11,0:11:5.80:0,6,39	0/0:47,0:47:34.63:0,35,289	0/0:29,0:28:31.80:0,32,245	0/0:40,0:40:0.21:0,0,75	1/1:38,0:37:5.84:44,6,0	0/0:31,0:31:87.04:0,87,1195	0/0:33,0:33:90.27:0,90,1322	0/0:25,0:24:66.02:0,66,852	0/1:19,1:17:97.45:135,0,97	1/1:35,0:35:11.63:94,12,0	0/1:62,1:60:3.24:112,0,3	0/0:18,0:17:9:0,9,90	0/0:13,0:13:5.99:0,6,60	0/0:28,0:27:11.91:0,12,159	0/1:49,0:49:31.38:61,0,31	0/1:62,0:60:99:419,0,377	0/1:28,0:28:61.63:63,0,62	0/1:23,3:26:91.54:92,0,99
chr10	96118351	.	CAT	C	1481.02	PASS	AB=0.955;AC=12;AF=0.214;AN=56;BaseQRankSum=10.389;DP=1115;FS=26.690;HRun=0;HaplotypeScore=291.3796;InbreedingCoeff=0.2414;MQ=37.01;MQ0=28;MQRankSum=-9.178;QD=4.09;ReadPosRankSum=1.001;VQSLOD=1.6300;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,112,2189	0/1:30,0:28:15.64:16,0,71	0/0:62,0:12:32.96:0,33,444	0/0:91,0:24:47.95:0,48,833	0/0:47,0:46:10.63:0,11,61	0/0:22,4:26:11.39:0,11,203	0/0:35,2:37:29.42:0,29,454	1/1:48,1:41:28.08:499,28,0	0/0:28,5:31:20.31:0,20,319	0/1:40,6:43:99:189,0,1015	0/0:12,3:15:5.96:0,6,116	0/0:48,8:56:57.04:0,57,781	0/1:26,5:30:62.51:63,0,257	0/0:36,4:40:0.40:0,0,162	0/0:44,0:44:4.06:0,4,29	0/0:28,0:28:50.23:0,50,1158	0/0:41,0:41:88.62:0,89,1905	0/0:25,0:24:42:0,42,1178	0/1:23,0:19:42.32:42,0,86	0/0:34,1:35:5.22:0,5,58	0/1:65,1:63:11.02:11,0,18	0/0:19,0:19:9.03:0,9,173	0/0:13,1:14:2.24:0,2,110	0/0:31,2:32:11.93:0,12,231	0/0:56,2:58:9.56:0,10,78	0/1:67,0:66:99:511,0,166	1/1:29,0:29:20.06:166,20,0	1/1:20,1:21:15.90:147,16,0
chr10	96118353	.	TAC	T	2166.84	PASS	AB=0.856;AC=16;AF=0.286;AN=56;BaseQRankSum=5.217;DP=1129;FS=5.369;HRun=0;HaplotypeScore=299.0846;InbreedingCoeff=0.2937;MQ=36.89;MQ0=25;MQRankSum=-7.219;QD=4.88;ReadPosRankSum=-0.972;VQSLOD=2.0287;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,1:49:82.52:0,83,1801	0/1:15,14:28:28.51:46,0,29	0/0:62,0:12:21.03:0,21,313	0/0:88,1:24:45.50:0,45,665	1/1:32,14:47:3.08:13,3,0	0/0:29,0:29:10.92:0,11,181	0/0:38,0:39:23.86:0,24,368	1/1:25,28:45:60.02:887,60,0	0/0:32,0:30:17.48:0,17,275	0/1:45,1:44:40.03:40,0,1005	0/0:14,0:14:5.96:0,6,100	0/0:61,0:61:57.85:0,58,788	0/1:32,0:31:20.53:21,0,281	0/0:44,0:44:9.59:0,10,151	0/0:38,8:46:1.06:0,1,4	0/0:28,0:28:63.15:0,63,965	0/0:39,2:41:32.60:0,33,1523	0/0:24,1:24:28.40:0,28,1003	0/1:22,1:19:25.33:25,0,117	1/1:21,11:34:1.76:5,2,0	1/1:61,4:63:8.89:85,9,0	0/0:19,1:20:9.03:0,9,149	0/0:16,0:16:8.94:0,9,113	0/0:32,0:31:11.93:0,12,200	0/0:40,17:58:0.33:0,0,2	0/1:46,21:66:99:800,0,214	0/1:20,9:29:53.96:231,0,54	1/1:11,8:19:6.78:176,7,0
chr10	96118366	.	ACG	A	1068.35	PASS	AB=0.983;AC=12;AF=0.214;AN=56;BaseQRankSum=7.457;DP=1061;FS=8.810;HRun=0;HaplotypeScore=285.6101;InbreedingCoeff=0.0884;MQ=37.45;MQ0=11;MQRankSum=-7.554;QD=2.58;ReadPosRankSum=0.569;VQSLOD=0.6594;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,121,2055	0/1:22,1:22:25.23:28,0,25	0/0:49,1:10:14.23:0,14,318	0/0:67,0:25:42.70:0,43,735	1/1:37,0:37:3.46:25,3,0	0/0:27,0:27:10.75:0,11,194	0/0:39,0:39:23.35:0,23,403	0/1:67,0:57:99:318,0,320	0/0:31,0:30:17.36:0,17,303	0/0:41,0:38:36.53:0,37,1245	0/0:14,0:14:5.96:0,6,115	0/0:60,0:60:60.94:0,61,903	0/1:30,0:30:9.40:9,0,351	0/0:46,0:46:7.60:0,8,189	0/0:43,0:43:1.06:0,1,4	0/0:26,0:26:63.14:0,63,1112	0/0:40,0:40:75.51:0,76,1777	0/0:24,0:24:50.30:0,50,1216	0/0:19,0:17:20.20:0,20,264	0/1:30,0:30:0:1,0,0	0/1:51,1:54:8.05:8,0,12	0/0:19,0:19:9.03:0,9,170	0/0:14,0:15:6.02:0,6,116	0/0:32,0:32:11.66:0,12,231	1/1:54,2:56:2.12:11,2,0	0/1:65,2:65:99:519,0,397	0/1:29,0:29:70:159,0,70	0/1:20,0:20:37.19:126,0,37
chr10	96118368	.	GCACTCACACTCGTACACA	G	2293.69	PASS	AB=0.992;AC=13;AF=0.232;AN=56;BaseQRankSum=7.768;DP=1043;FS=4.557;HRun=0;HaplotypeScore=415.7163;InbreedingCoeff=-0.1058;MQ=37.32;MQ0=9;MQRankSum=-8.246;QD=5.06;ReadPosRankSum=-2.277;VQSLOD=0.7920;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,121,7923	0/1:22,1:22:14.76:30,0,15	0/0:52,0:10:21.43:0,21,501	0/1:63,0:24:2.88:3,0,1106	1/1:35,0:35:0.47:2,0,0	0/0:26,0:26:7.09:0,7,282	0/0:39,0:39:25.39:0,25,574	0/1:71,0:61:26.16:26,0,3185	0/0:31,0:30:18.91:0,19,859	0/1:40,0:36:26.86:27,0,2326	0/0:14,0:14:5.46:0,5,367	0/0:59,0:59:58.38:0,58,1701	0/1:29,0:29:99:115,0,566	0/0:45,0:45:10.96:0,11,412	0/0:43,0:43:4.04:0,4,33	0/0:25,0:25:60.18:0,60,3624	0/0:41,0:41:99:0,114,7106	0/0:25,0:25:72.23:0,72,4761	0/1:21,0:20:2.13:2,0,526	0/0:27,1:28:1.49:0,1,16	0/0:53,0:53:1.73:0,2,21	0/0:18,0:18:9.03:0,9,431	0/0:14,0:14:6.02:0,6,154	0/0:31,0:31:13.14:0,13,547	1/1:54,1:56:1.38:5,1,0	0/1:64,2:63:99:1538,0,2105	0/1:29,0:29:99:564,0,424	0/1:20,0:20:99:113,0,482
chr10	96118373	.	CACACTCGT	C	1051.57	PASS	AB=0.951;AC=11;AF=0.196;AN=56;BaseQRankSum=8.450;DP=1028;FS=1.252;HRun=0;HaplotypeScore=328.9475;InbreedingCoeff=-0.0803;MQ=38.32;MQ0=8;MQRankSum=-6.767;QD=2.93;ReadPosRankSum=-0.251;VQSLOD=1.3075;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,121,4670	0/1:23,0:22:16.62:17,0,57	0/0:45,0:11:20.64:0,21,506	0/0:59,0:24:18.45:0,18,963	0/1:34,0:34:0:1,0,0	0/1:19,5:24:7.99:8,0,179	0/0:37,2:39:14.20:0,14,305	0/0:74,0:64:99:0,159,3704	0/0:27,3:29:15.97:0,16,461	0/1:37,1:34:99:133,0,1952	0/0:11,3:14:5.62:0,6,170	0/0:52,6:58:48.45:0,48,1061	0/1:22,5:27:99:183,0,410	0/1:40,4:44:1.24:1,0,324	0/0:43,0:43:3.98:0,4,33	0/0:25,0:25:60.21:0,60,2255	0/0:40,0:40:91.24:0,91,4091	0/0:30,0:30:84.27:0,84,3137	0/0:25,0:23:12.96:0,13,831	0/0:26,0:26:2.35:0,2,19	0/0:55,0:55:6.26:0,6,168	0/0:16,2:18:9.03:0,9,236	0/0:13,0:13:6.01:0,6,87	0/0:28,3:31:11.47:0,11,282	1/1:57,0:57:0.76:2,1,0	0/1:66,0:63:99:538,0,2095	0/1:30,0:30:99:269,0,433	0/1:16,0:16:25.11:25,0,548
chr10	96118377	.	CTCGT	C	1077.16	PASS	AB=0.946;AC=13;AF=0.232;AN=56;BaseQRankSum=8.938;DP=995;FS=1.798;HRun=0;HaplotypeScore=288.6556;InbreedingCoeff=-0.1593;MQ=38.88;MQ0=8;MQRankSum=-7.754;QD=2.55;ReadPosRankSum=-0.169;VQSLOD=2.1558;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,127,3398	0/1:21,0:21:16.11:16,0,57	0/0:43,0:11:23.29:0,23,508	0/1:50,0:22:1.15:1,0,892	0/1:29,3:32:0:1,0,0	0/1:22,2:24:13.61:14,0,164	0/0:35,2:37:14.75:0,15,306	0/0:75,0:65:99:0,111,3047	0/0:27,2:29:16.51:0,17,333	0/1:33,3:33:99:129,0,1463	0/0:14,0:14:5.86:0,6,144	0/0:55,3:58:43.30:0,43,710	0/1:25,2:27:99:128,0,251	0/1:38,2:41:32:32,0,269	0/0:38,2:40:2.98:0,3,15	0/0:24,0:24:63.22:0,63,1744	0/0:39,0:39:94.45:0,94,2934	0/0:31,0:31:90.29:0,90,2406	0/1:23,1:22:12.86:13,0,707	0/0:26,1:27:2.17:0,2,19	0/0:41,9:50:6.64:0,7,131	0/0:18,0:18:9.03:0,9,172	0/0:10,2:12:6.01:0,6,74	0/0:29,1:30:11.43:0,11,241	1/1:52,4:56:0.18:1,0,0	0/1:61,4:62:99:580,0,1574	0/1:29,1:30:99:243,0,308	0/1:14,1:15:53.61:54,0,415
chr10	96118379	.	CGT	C	999.60	PASS	AB=0.972;AC=12;AF=0.214;AN=56;BaseQRankSum=10.372;DP=974;FS=7.506;HRun=0;HaplotypeScore=266.9650;InbreedingCoeff=-0.1401;MQ=38.80;MQ0=7;MQRankSum=-8.778;QD=2.55;ReadPosRankSum=1.757;VQSLOD=1.4700;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,124,2329	0/0:20,0:20:4.57:0,5,49	0/0:42,0:10:16.65:0,17,365	0/1:48,0:22:22.53:23,0,663	1/1:30,2:32:0.47:1,0,0	0/1:24,0:24:16.74:17,0,109	0/0:33,1:34:13.56:0,14,179	0/0:73,1:64:99:0,150,2118	0/0:29,0:29:16.06:0,16,297	0/1:33,0:30:58.52:59,0,899	0/0:13,0:13:5.96:0,6,122	0/0:53,3:56:30.15:0,30,421	0/1:26,1:27:99:145,0,156	0/1:41,0:41:8.14:8,0,195	0/0:41,0:41:1.96:0,2,5	0/0:24,0:24:63.21:0,63,1197	0/0:39,0:39:93.79:0,94,2045	0/0:31,0:31:90.31:0,90,1714	0/1:21,0:19:49.41:49,0,465	0/0:26,0:26:2.68:0,3,20	0/0:45,5:50:4.19:0,4,57	0/0:16,1:17:9.03:0,9,168	0/0:10,1:11:3.01:0,3,58	0/0:28,1:29:8.76:0,9,169	0/1:55,1:56:0.62:1,0,1	0/1:63,1:61:99:568,0,807	0/1:30,0:30:99:240,0,130	0/1:11,4:15:21.70:22,0,279
chr10	96118380	.	GTA	G	909.62	PASS	AB=0.922;AC=12;AF=0.214;AN=56;BaseQRankSum=9.638;DP=968;FS=23.502;HRun=0;HaplotypeScore=263.8379;InbreedingCoeff=-0.1009;MQ=38.05;MQ0=7;MQRankSum=-8.574;QD=2.13;ReadPosRankSum=2.695;VQSLOD=0.9145;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,116,2203	0/0:19,1:20:5.70:0,6,37	0/0:40,0:10:20:0,20,337	0/0:47,0:21:34.58:0,35,518	1/1:27,4:31:0.34:1,0,0	0/1:22,1:23:4.20:4,0,71	0/0:34,1:35:8.99:0,9,70	0/0:75,0:65:99:0,116,1632	0/0:29,0:29:16.06:0,16,267	0/1:33,0:30:31.99:32,0,644	0/0:13,0:13:5.96:0,6,111	0/1:55,0:55:23.22:23,0,250	0/1:25,1:26:63.68:64,0,122	0/1:39,1:41:2.50:2,0,124	0/0:33,8:41:1.96:0,2,5	0/0:25,0:25:66.17:0,66,1158	0/0:38,0:38:99:0,101,1957	0/0:31,0:31:90.26:0,90,1685	0/1:18,2:18:73.76:74,0,425	0/0:23,3:26:2.85:0,3,16	0/1:49,1:50:6.80:7,0,20	0/0:16,0:16:9.02:0,9,121	0/0:11,0:11:3.01:0,3,38	0/0:29,0:29:8.85:0,9,136	0/1:47,9:56:0.40:1,0,0	0/1:54,8:60:99:533,0,605	0/1:18,12:30:99:294,0,105	0/0:17,0:17:19.69:0,20,233
chr10	96118381	.	TAC	T	787.98	PASS	AB=0.959;AC=13;AF=0.232;AN=56;BaseQRankSum=7.638;DP=987;FS=14.939;HRun=0;HaplotypeScore=269.4645;InbreedingCoeff=-0.0576;MQ=37.94;MQ0=6;MQRankSum=-6.894;QD=1.54;ReadPosRankSum=3.493;VQSLOD=0.9869;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:88.98:0,89,1701	0/0:20,0:20:2.82:0,3,16	0/0:41,0:10:15.05:0,15,249	0/0:47,0:19:19.24:0,19,261	1/1:31,0:31:0.34:1,0,0	0/0:21,3:24:2.55:0,3,33	0/1:32,4:36:0.16:0,0,0	0/1:76,0:71:81.85:82,0,677	0/0:24,4:28:14.80:0,15,157	0/1:29,4:31:63.54:64,0,304	0/0:14,1:15:5.69:0,6,63	0/1:51,4:55:99:110,0,137	0/1:22,5:27:36.71:37,0,114	0/0:34,6:40:3.93:0,4,39	0/0:42,0:41:0.94:0,1,3	0/0:26,0:26:60.05:0,60,884	0/0:39,0:39:99:0,103,1576	0/0:31,0:31:86.83:0,87,1341	0/1:21,0:19:22.50:22,0,245	0/1:26,0:26:0:0,0,0	0/1:51,1:52:18.43:32,0,18	0/0:13,4:17:11.67:0,12,82	0/0:12,1:13:8.26:0,8,37	0/0:26,3:29:5.85:0,6,66	0/1:56,0:56:0.34:1,0,0	0/1:63,0:60:99:382,0,293	0/1:30,0:30:43.53:184,0,44	0/0:17,0:17:11.19:0,11,109
chr10	96118385	.	C	CACACATACAT	3838.13	PASS	AB=0.963;AC=24;AF=0.429;AN=56;BaseQRankSum=6.762;DP=1013;FS=12.155;HRun=0;HaplotypeScore=364.0584;InbreedingCoeff=0.0744;MQ=37.80;MQ0=7;MQRankSum=-5.301;QD=6.84;ReadPosRankSum=2.270;VQSLOD=0.8967;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,116,2842	1/1:22,0:22:4.81:38,5,0	0/0:45,0:12:23.60:0,24,348	0/0:47,0:18:25.37:0,25,430	0/0:30,1:32:0.39:0,0,1	1/1:24,2:26:1.23:19,1,0	1/1:33,0:33:6.22:43,6,0	0/1:83,0:72:99:212,0,780	1/1:29,1:29:14.98:145,15,0	0/1:31,1:30:45.15:754,0,45	1/1:15,0:15:5.14:47,5,0	0/1:49,7:56:25.70:358,0,26	0/1:26,1:27:91.16:135,0,91	1/1:37,3:40:2.81:107,3,0	0/0:42,0:42:2.99:0,3,17	0/0:27,0:27:68.91:0,69,1220	0/0:41,0:41:99:0,107,2636	0/0:31,0:31:90.20:0,90,2155	0/1:24,0:22:25.68:303,0,26	0/0:26,0:27:5.54:0,6,40	0/0:56,0:57:11.58:0,12,74	0/1:16,1:17:8.46:62,0,8	0/1:11,2:13:16:16,0,37	1/1:27,2:29:6.63:49,7,0	0/0:53,0:56:0.45:0,0,2	0/1:63,0:62:99:987,0,110	0/1:30,0:31:22.41:190,0,22	0/1:18,0:18:99:375,0,147
chr10	96118391	.	C	CAT	2704.32	PASS	AB=0.921;AC=12;AF=0.214;AN=56;BaseQRankSum=3.853;DP=981;FS=6.128;HRun=0;HaplotypeScore=272.9287;InbreedingCoeff=-0.2139;MQ=37.63;MQ0=8;MQRankSum=-6.867;QD=6.20;ReadPosRankSum=1.843;VQSLOD=2.6263;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,116,1664	0/0:10,11:21:11.66:0,12,79	0/0:54,0:15:33.35:0,33,372	0/0:42,0:14:21.43:0,21,283	0/0:24,9:33:2.51:0,3,24	0/0:22,1:23:6.76:0,7,37	1/1:27,1:28:0.39:1,0,0	0/1:58,22:69:99:1300,0,310	0/0:33,0:32:25.49:0,25,160	0/1:29,0:27:24.26:24,0,183	0/0:13,0:13:5.72:0,6,29	0/1:51,3:54:69.84:90,0,70	0/1:27,0:27:26.87:27,0,109	0/1:32,0:32:2.28:2,0,16	0/0:37,6:42:3.58:0,4,21	0/0:28,1:29:68.99:0,69,942	0/0:41,0:41:99:0,105,1595	0/0:33,0:33:87.65:0,88,1332	0/1:21,1:20:99:110,0,148	0/0:23,4:27:8.87:0,9,73	0/1:46,1:50:54.94:68,0,55	0/0:18,0:18:10.08:0,10,47	0/0:10,0:10:8.83:0,9,62	0/0:24,0:24:5.27:0,5,31	0/0:45,12:57:2.84:0,3,25	0/1:52,14:65:99:891,0,282	0/1:27,4:31:99:150,0,126	0/1:14,2:16:66.13:177,0,66
chr10	96118393	.	CAT	C	1441.91	PASS	AB=0.992;AC=25;AF=0.446;AN=56;BaseQRankSum=6.655;DP=962;FS=1.266;HRun=0;HaplotypeScore=262.3588;InbreedingCoeff=-0.1032;MQ=39.09;MQ0=8;MQRankSum=-4.823;QD=2.17;ReadPosRankSum=-6.801;VQSLOD=0.6424;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,107,1847	0/1:18,0:18:8.34:20,0,8	0/0:52,0:16:14.65:0,15,340	0/0:40,0:14:25.89:0,26,272	1/1:30,0:30:5.85:48,6,0	0/1:22,1:23:14.38:25,0,14	1/1:26,1:27:0:2,0,0	0/1:81,0:70:99:188,0,1035	0/1:33,0:32:73.91:87,0,74	0/1:28,0:26:99:120,0,242	0/0:13,0:13:5.64:0,6,46	0/1:51,0:51:53.49:53,0,88	0/1:27,1:28:34.47:78,0,34	0/1:35,1:36:9.56:28,0,10	1/1:43,0:42:1.28:15,1,0	0/0:31,0:31:41.33:0,41,898	0/0:41,0:41:81.92:0,82,1680	0/0:33,0:33:59.52:0,60,1383	0/1:22,0:20:59.92:60,0,205	1/1:22,2:24:8.90:73,9,0	0/1:48,0:48:66.42:66,0,71	0/0:18,0:18:0.24:0,0,21	1/1:9,1:10:8.32:38,8,0	0/0:26,0:26:5.82:0,6,49	1/1:54,0:54:4.82:45,5,0	0/1:63,0:61:99:355,0,282	0/1:27,0:27:50.83:213,0,51	0/1:17,0:17:53.14:93,0,53
chr10	96118395	.	TACACACAC	T	602.16	PASS	AB=0.959;AC=15;AF=0.268;AN=56;BaseQRankSum=4.054;DP=960;FS=29.754;HRun=0;HaplotypeScore=319.6268;InbreedingCoeff=0.1133;MQ=39.06;MQ0=7;MQRankSum=-2.742;QD=1.63;ReadPosRankSum=-6.379;VQSLOD=0.5144;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,115,4066	0/0:16,0:16:6.02:0,6,109	0/0:50,0:17:30.50:0,30,949	0/0:38,0:13:27.56:0,28,663	0/1:27,0:28:0.26:0,0,16	1/1:17,4:23:3.95:19,4,0	0/0:25,1:28:0.28:0,0,1	0/0:82,0:72:99:0,140,3249	0/1:32,1:33:99:199,0,114	0/1:24,1:24:99:241,0,668	0/0:9,3:12:5.04:0,5,49	0/0:40,5:53:14.72:0,15,442	0/1:26,1:28:99:107,0,214	0/1:29,5:37:26.49:26,0,48	0/0:43,0:44:5.38:0,5,29	0/0:31,0:31:64.66:0,65,1967	0/0:38,0:40:99:0,111,3813	0/0:30,0:32:90.19:0,90,3215	0/0:22,0:21:35.30:0,35,506	0/1:25,0:25:3.50:4,0,19	0/0:48,0:48:11.60:0,12,233	0/1:13,2:16:0.41:0,0,45	1/1:7,1:11:10.75:84,11,0	0/0:21,3:26:2.67:0,3,25	1/1:53,0:53:3.62:9,4,0	0/1:62,0:60:9.03:9,0,1583	0/1:27,0:27:48.32:48,0,218	0/0:18,0:18:33.43:0,33,534
chr10	96118403	.	C	CACAT	1768.92	PASS	AB=0.998;AC=24;AF=0.429;AN=56;BaseQRankSum=8.756;DP=921;FS=11.735;HRun=0;HaplotypeScore=277.3587;InbreedingCoeff=0.2911;MQ=40.54;MQ0=7;MQRankSum=-5.618;QD=3.48;ReadPosRankSum=-3.456;VQSLOD=0.5737;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,108,1857	0/0:16,0:16:5.99:0,6,50	0/0:52,0:21:35.60:0,36,578	0/0:43,0:16:23.39:0,23,400	0/0:33,0:33:5.70:0,6,54	1/1:21,1:23:2.16:17,2,0	0/1:29,0:29:0.18:1,0,0	0/1:79,0:69:55.40:55,0,885	1/1:29,1:29:24.53:194,25,0	0/1:25,0:25:19.16:448,0,19	0/0:12,0:12:0.47:0,0,1	1/1:46,2:51:8.31:187,8,0	1/1:24,1:25:7.11:181,7,0	1/1:38,1:39:5.34:50,5,0	0/1:44,0:43:0.60:1,0,10	0/0:24,0:25:54.60:0,55,932	0/0:41,0:41:99:0,111,1747	0/0:30,0:30:80.28:0,80,1405	0/1:18,0:17:7.27:7,0,150	0/0:23,0:23:8.61:0,9,59	0/0:47,0:47:21.19:0,21,181	1/1:15,0:15:3.01:45,3,0	1/1:10,0:10:11.99:108,12,0	1/1:23,1:24:0.25:1,0,0	0/0:47,0:47:1.11:0,1,19	0/1:57,0:56:99:441,0,362	0/1:23,0:23:61.16:61,0,77	0/1:16,0:16:58.96:138,0,59
chr10	96118404	.	A	ATG	1573.67	PASS	AB=0.828;AC=28;AF=0.500;AN=56;BaseQRankSum=2.725;DP=915;FS=68.952;HRun=0;HaplotypeScore=255.2743;InbreedingCoeff=0.2487;MQ=40.61;MQ0=7;MQRankSum=-3.365;QD=2.91;ReadPosRankSum=-3.308;VQSLOD=-0.0305;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,1821	0/1:15,0:15:12.97:13,0,69	0/0:50,0:20:46.89:0,47,638	0/0:41,0:16:41.61:0,42,597	1/1:33,0:33:9.28:41,9,0	1/1:22,1:23:2.14:35,2,0	0/1:17,8:29:0.28:0,0,1	0/0:78,0:68:65.67:0,66,1515	1/1:30,0:29:13.99:335,14,0	0/1:13,12:29:16.02:477,0,16	0/1:7,5:12:0:0,0,0	0/1:34,16:53:62.58:94,0,63	0/1:19,5:25:62.41:212,0,62	1/1:28,10:39:1.94:74,2,0	1/1:44,0:43:1.28:5,1,0	0/0:24,0:24:56.22:0,56,876	0/0:41,0:41:99:0,117,1727	0/0:29,0:29:81.21:0,81,1262	0/1:18,0:17:84.42:84,0,141	1/1:23,0:23:8.27:40,8,0	0/0:48,0:48:9.54:0,10,153	1/1:11,4:15:3.01:60,3,0	1/1:10,0:10:12.04:208,12,0	0/1:13,11:25:0.29:0,0,0	1/1:45,0:45:1.41:5,1,0	0/1:56,0:54:37.84:38,0,438	0/0:23,0:23:6.06:0,6,64	0/1:16,0:16:19.70:20,0,213
chr10	96118520	.	TTTTG	T	5964.62	PASS	AB=0.535;AC=17;AF=0.304;AN=56;BaseQRankSum=8.959;DP=507;FS=7.173;HRun=0;HaplotypeScore=89.9442;InbreedingCoeff=0.9077;MQ=58.88;MQ0=2;MQRankSum=-3.186;QD=34.68;ReadPosRankSum=1.912;VQSLOD=4.2681;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:66.22:0,66,1448	1/1:3,13:16:27.05:435,27,0	0/0:21,0:16:32.04:0,32,574	0/0:11,0:8:23.93:0,24,392	1/1:2,15:17:42.09:669,42,0	0/0:14,0:14:42.14:0,42,1033	0/0:12,0:12:30.09:0,30,634	0/0:22,0:21:45.08:0,45,901	0/0:14,0:14:39.13:0,39,910	0/0:27,0:27:72.23:0,72,1548	0/0:10,0:10:23.99:0,24,515	0/0:16,0:16:42.07:0,42,1008	0/0:14,0:14:33.11:0,33,703	0/0:12,0:12:33.11:0,33,660	1/1:3,8:11:9.03:162,9,0	0/0:18,0:18:48.16:0,48,1127	0/0:19,0:19:48.16:0,48,1179	0/0:28,0:28:54:0,54,1774	1/1:2,17:18:51.13:769,51,0	1/1:0,21:21:54.15:892,54,0	1/1:3,18:21:30.10:523,30,0	0/0:10,0:9:21.07:0,21,439	0/0:17,0:17:48.16:0,48,1078	0/0:17,0:17:42.61:0,43,846	1/1:3,29:32:60.21:1077,60,0	0/1:3,20:23:13.38:953,0,13	1/1:0,12:12:27.09:485,27,0	0/0:27,0:27:75.19:0,75,1622
chr10	96118631	.	TG	T	608.22	PASS	AC=34;AF=1.000;AN=34;DP=68;FS=0.000;HRun=3;HaplotypeScore=19.3935;InbreedingCoeff=-0.1338;MQ=31.65;MQ0=2;QD=10.67;VQSLOD=1.2104;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:8.94:77,9,0	1/1:2,1:3:3.01:36,3,0	./.	./.	./.	1/1:0,2:2:2.97:20,3,0	./.	1/1:4,2:5:3.01:37,3,0	1/1:0,3:2:5.93:40,6,0	1/1:1,2:3:3.01:37,3,0	./.	1/1:2,1:3:2.94:18,3,0	1/1:2,1:3:5.92:39,6,0	1/1:0,1:1:2.97:20,3,0	1/1:0,5:5:8.90:60,9,0	1/1:3,5:8:17.88:139,18,0	1/1:3,1:4:2.99:24,3,0	./.	./.	./.	./.	./.	./.	1/1:0,3:3:2.97:20,3,0	1/1:1,0:1:2.96:19,3,0	1/1:2,1:3:3.01:37,3,0	1/1:1,2:3:5.90:37,6,0	1/1:1,0:1:2.99:24,3,0
chr10	96119551	.	TATA	T	412.29	PASS	AC=12;AF=1.000;AN=12;DP=97;FS=0.000;HRun=0;HaplotypeScore=37.2947;MQ=8.83;MQ0=88;QD=17.18;VQSLOD=2.8625;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,1:1:3.01:53,3,0	./.	./.	1/1:2,1:1:3.01:53,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:2,1:1:3.01:53,3,0	./.	./.	./.	1/1:4,1:1:3.01:55,3,0	1/1:2,4:4:12.04:213,12,0	./.	./.	./.	./.	1/1:4,1:1:3.01:53,3,0	./.	./.	./.
chr10	96119565	.	T	TA	386.52	PASS	AC=28;AF=1.000;AN=28;DP=109;FS=0.000;HRun=1;HaplotypeScore=35.2416;InbreedingCoeff=-0.1153;MQ=14.02;MQ0=82;QD=6.55;VQSLOD=0.5102;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,1:1:2.98:22,3,0	./.	./.	1/1:2,2:2:3.79:18,4,0	1/1:5,1:1:2.92:17,3,0	./.	./.	./.	./.	1/1:3,0:1:3.01:31,3,0	./.	1/1:5,1:2:5.95:50,6,0	1/1:2,1:1:2.92:17,3,0	1/1:2,1:1:2.88:15,3,0	./.	./.	./.	1/1:3,1:1:2.98:21,3,0	1/1:1,5:5:14.50:80,15,0	./.	./.	1/1:2,1:1:2.90:16,3,0	./.	1/1:5,2:3:8.85:65,9,0	1/1:3,1:1:2.97:20,3,0	1/1:2,2:2:5.94:41,6,0	1/1:4,0:1:3.01:46,3,0
chr10	96119693	.	A	AAG	1691.25	PASS	AC=16;AF=0.320;AN=50;BaseQRankSum=0.889;DP=255;FS=4.466;HRun=0;HaplotypeScore=51.0949;InbreedingCoeff=0.8559;MQ=35.56;MQ0=71;MQRankSum=-4.505;QD=24.87;ReadPosRankSum=0.362;VQSLOD=3.9328;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:14:33.11:0,33,459	./.	./.	./.	1/1:1,8:8:24.08:396,24,0	0/0:11,0:9:24.08:0,24,336	0/0:11,0:9:18.04:0,18,229	0/0:17,0:2:3.01:0,3,42	0/0:8,0:7:18.02:0,18,229	0/0:10,0:7:17.94:0,18,252	0/0:8,0:7:18.02:0,18,230	0/0:13,0:8:15.05:0,15,210	0/0:10,0:7:18.06:0,18,249	0/0:10,0:7:18.05:0,18,235	1/1:3,3:4:12.04:215,12,0	0/0:12,0:8:24.08:0,24,336	0/0:15,0:14:30.10:0,30,419	0/0:12,0:5:9.03:0,9,126	1/1:7,3:4:9.03:162,9,0	1/1:1,5:4:6.02:108,6,0	1/1:5,3:3:6.02:108,6,0	0/0:7,0:5:9.03:0,9,126	0/0:9,0:7:18.06:0,18,252	0/0:5,0:3:9.03:0,9,126	1/1:2,9:10:21.07:376,21,0	1/1:1,8:8:18.06:324,18,0	1/1:5,3:4:12.03:186,12,0	0/0:5,0:4:9.03:0,9,126
chr10	96119745	.	C	CT	1369.80	PASS	AB=0.841;AC=22;AF=0.393;AN=56;BaseQRankSum=-2.189;DP=358;FS=5.198;HRun=12;HaplotypeScore=60.4272;InbreedingCoeff=0.2534;MQ=62.19;MQ0=10;MQRankSum=-2.489;QD=7.36;ReadPosRankSum=-0.500;VQSLOD=2.0850;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:26:12.43:0,12,237	1/1:0,4:4:9.01:88,9,0	0/0:13,0:10:9.76:0,10,64	0/1:16,0:12:5.59:6,0,20	1/1:5,7:11:18.03:175,18,0	0/0:17,1:18:7.70:0,8,202	0/1:15,2:20:9.53:10,0,243	0/0:21,0:16:22.80:0,23,155	0/1:9,1:10:12.25:12,0,76	0/0:11,0:12:22.84:0,23,157	0/1:6,1:8:15.18:15,0,57	0/1:11,1:12:9.23:9,0,94	0/0:11,0:11:26.84:0,27,197	0/1:7,1:9:28.69:29,0,73	0/1:2,5:6:9.82:73,0,10	0/1:12,2:15:23.43:23,0,168	0/0:30,1:30:46.80:0,47,486	0/0:7,0:7:10.97:0,11,72	0/1:10,3:9:6.89:102,0,7	1/1:3,11:15:30:301,30,0	1/1:3,5:8:17.95:157,18,0	0/0:12,0:10:23.85:0,24,175	0/0:7,0:6:11.91:0,12,88	0/0:8,0:7:11.93:0,12,88	1/1:4,9:13:8.01:226,8,0	1/1:6,3:10:10.06:126,10,0	0/1:3,9:13:2.49:202,0,2	0/0:1,0:1:2.98:0,3,22
chr10	96120854	.	A	ATTT	931.35	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.645;DP=522;FS=7.133;HRun=10;HaplotypeScore=78.1047;InbreedingCoeff=0.9933;MQ=62.51;MQ0=3;MQRankSum=-3.707;QD=21.17;ReadPosRankSum=-2.715;VQSLOD=1.3669;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:55.49:0,55,688	0/0:14,0:13:39.11:0,39,474	0/0:10,0:10:20.86:0,21,216	0/0:10,0:8:24.06:0,24,281	0/0:27,0:27:57.05:0,57,680	0/0:16,0:16:39.01:0,39,457	0/0:18,0:17:45.12:0,45,535	1/1:18,5:22:36.63:528,37,0	0/0:15,0:16:37.46:0,37,471	0/0:29,0:29:57.05:0,57,682	0/0:12,0:11:27.05:0,27,328	0/0:22,0:22:51.08:0,51,568	0/0:15,0:15:41.48:0,41,482	0/0:13,0:13:33.08:0,33,389	0/0:16,0:16:42.11:0,42,498	0/0:13,0:13:39.12:0,39,474	0/0:22,0:22:43.57:0,44,501	0/0:14,0:13:27.07:0,27,328	0/0:31,0:31:78.16:0,78,932	0/0:25,0:25:66.07:0,66,745	0/0:25,0:25:63.12:0,63,765	0/0:11,0:12:27:0,27,309	0/0:17,0:17:48.11:0,48,556	0/0:15,0:15:24.02:0,24,292	0/0:19,0:19:36.04:0,36,438	0/0:20,0:20:48.07:0,48,573	0/0:21,0:21:45.09:0,45,534	1/1:9,11:20:29.13:525,29,0
chr10	96122493	.	CGG	C	7901.60	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=6.950;DP=605;FS=2.712;HRun=5;HaplotypeScore=155.4358;InbreedingCoeff=0.9920;MQ=62.69;MQ0=9;MQRankSum=-5.787;QD=18.46;ReadPosRankSum=-0.296;VQSLOD=1.5442;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.57:0,67,965	1/1:5,6:10:27.01:246,27,0	0/0:36,0:19:16.01:0,16,386	0/0:25,0:18:36.24:0,36,366	1/1:16,4:20:35.31:277,35,0	1/1:9,7:16:28.36:256,28,0	1/1:9,6:15:27.02:248,27,0	1/1:19,0:19:50.58:375,51,0	1/1:9,11:20:59.70:508,60,0	1/1:0,16:17:47.82:409,48,0	1/1:8,5:13:30:265,30,0	1/1:11,9:20:47.46:396,47,0	1/1:9,9:18:41.47:346,41,0	1/1:8,9:17:50.87:431,51,0	1/1:13,10:23:59.21:515,59,0	0/0:16,0:16:45.70:0,46,577	0/0:41,0:41:99:0,100,1385	0/0:32,0:32:78.28:0,78,1133	1/1:20,0:15:35.94:303,36,0	1/1:11,5:16:17.94:159,18,0	1/1:23,2:25:41.84:334,42,0	1/1:9,3:10:23.99:207,24,0	1/1:15,6:21:23.61:202,24,0	1/1:17,5:22:24.37:199,24,0	1/1:20,13:31:86.97:761,87,0	1/1:12,7:18:47.98:444,48,0	1/1:29,15:43:99:871,104,0	1/1:5,2:7:17.95:149,18,0
chr10	96122495	.	GGGGTGTGTGT	G	12809.48	PASS	AB=0.976;AC=41;AF=0.732;AN=56;BaseQRankSum=5.782;DP=599;FS=2.568;HRun=0;HaplotypeScore=216.6980;InbreedingCoeff=0.7540;MQ=61.70;MQ0=10;MQRankSum=-6.291;QD=30.72;ReadPosRankSum=-0.752;VQSLOD=4.5665;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.15:0,78,2737	1/1:11,0:10:27.06:657,27,0	0/0:35,0:18:19.14:0,19,821	0/0:28,0:19:43.72:0,44,888	1/1:19,0:20:35.97:422,36,0	1/1:16,0:16:31.28:447,31,0	1/1:15,0:15:27.05:358,27,0	1/1:1,16:17:50.59:400,51,0	1/1:20,0:20:25.41:538,25,0	1/1:17,0:17:45.86:491,46,0	0/1:12,0:13:1.81:258,0,2	0/1:20,0:20:67.53:476,0,68	0/1:18,0:18:2.38:513,0,2	1/1:17,0:17:51.03:626,51,0	1/1:22,0:22:57.01:1157,57,0	0/0:16,0:16:48.13:0,48,1647	0/0:41,0:41:99:0,117,3746	0/0:34,0:34:96.24:0,96,3356	1/1:19,0:14:35.97:323,36,0	1/1:5,10:15:17.97:457,18,0	1/1:24,0:24:44.86:437,45,0	1/1:11,0:10:2.44:226,2,0	1/1:7,0:20:23.43:379,23,0	1/1:22,0:22:23.72:228,24,0	1/1:32,0:30:87.06:1555,87,0	1/1:19,0:17:48.03:871,48,0	1/1:41,0:39:99:1727,104,0	1/1:7,0:7:17.96:263,18,0
chr10	96122497	.	GGT	G	1688.14	PASS	AB=0.975;AC=44;AF=0.846;AN=52;BaseQRankSum=10.675;DP=595;FS=0.534;HRun=0;HaplotypeScore=175.8524;InbreedingCoeff=0.2401;MQ=61.71;MQ0=10;MQRankSum=-8.553;QD=3.19;ReadPosRankSum=0.398;VQSLOD=2.7590;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,2:30:25.79:0,26,631	1/1:11,0:10:17.04:82,17,0	0/1:35,0:18:0.83:1,0,19	0/1:28,0:19:3.92:4,0,69	1/1:20,0:20:2.09:12,2,0	1/1:14,0:14:2.17:56,2,0	1/1:15,0:15:17.04:83,17,0	./.	1/1:21,0:21:33.59:156,34,0	1/1:17,0:17:19.89:96,20,0	1/1:13,0:13:14.20:70,14,0	1/1:20,0:20:25.70:132,26,0	1/1:18,0:18:22.73:111,23,0	1/1:17,0:17:20.88:118,21,0	1/1:21,0:21:19.57:119,20,0	0/1:16,0:16:13.47:13,0,279	0/1:39,3:42:7.81:8,0,666	0/1:28,1:32:13.34:13,0,633	./.	1/1:15,0:15:14.20:70,14,0	1/1:24,0:24:2.84:14,3,0	1/1:12,0:10:8.48:42,8,0	1/1:20,0:20:17.78:86,18,0	0/1:21,0:21:3.45:32,0,3	1/1:32,0:30:34.09:167,34,0	1/1:18,0:16:22.38:105,22,0	1/1:40,0:38:42.61:208,43,0	1/1:7,0:7:5.68:28,6,0
chr10	96122519	.	TGTGTGTGTGTGC	T	7374.96	PASS	AB=0.994;AC=30;AF=0.536;AN=56;BaseQRankSum=10.100;DP=612;FS=0.000;HRun=0;HaplotypeScore=261.0457;InbreedingCoeff=-0.0488;MQ=49.31;MQ0=11;MQRankSum=-7.998;QD=17.31;ReadPosRankSum=4.017;VQSLOD=3.2859;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:76.05:0,76,3720	1/1:12,0:11:8.60:452,9,0	0/0:35,0:18:44.22:0,44,1089	0/0:34,0:22:29.13:0,29,1209	0/1:17,0:17:43.70:157,0,44	0/1:16,0:16:67.80:219,0,68	0/1:21,0:21:99:123,0,158	1/1:22,0:22:2.91:107,3,0	0/1:20,0:20:77.23:77,0,232	0/1:17,0:17:33.82:175,0,34	0/1:13,0:13:61:61,0,117	0/1:20,0:20:99:175,0,284	0/1:19,0:19:99:236,0,116	0/1:21,0:21:99:254,0,202	0/1:23,0:23:84.94:562,0,85	0/0:17,0:17:51.11:0,51,2017	0/0:36,0:36:93.22:0,93,4169	0/0:31,0:32:90.19:0,90,3994	1/1:17,0:15:19.03:140,19,0	1/1:21,0:21:26.69:622,27,0	1/1:26,0:26:9.73:324,10,0	0/1:15,0:13:57.50:58,0,74	1/1:22,0:22:13.35:253,13,0	0/1:25,0:25:51.55:84,0,52	0/1:27,1:27:72.42:767,0,72	0/1:19,1:18:99:457,0,115	1/1:24,2:24:54.07:1789,54,0	1/1:5,0:5:14.69:283,15,0
chr10	96122521	.	TGTGTGTGTGC	T	11790.77	PASS	AB=0.994;AC=36;AF=0.643;AN=56;BaseQRankSum=7.729;DP=593;FS=1.174;HRun=0;HaplotypeScore=218.3842;InbreedingCoeff=0.3865;MQ=48.76;MQ0=10;MQRankSum=-6.642;QD=28.76;ReadPosRankSum=1.540;VQSLOD=4.4026;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:75.79:0,76,3154	1/1:10,2:11:27.15:663,27,0	0/0:34,0:19:47.17:0,47,786	0/0:32,0:20:29.12:0,29,966	1/1:17,1:18:13:303,13,0	1/1:16,1:17:18.55:438,19,0	0/1:20,0:20:42.34:321,0,42	1/1:21,0:21:34.03:312,34,0	0/1:20,0:20:22.12:436,0,22	1/1:17,0:17:38.91:506,39,0	0/1:12,0:12:8.03:197,0,8	0/1:19,0:19:74.33:425,0,74	0/1:19,0:19:17.12:505,0,17	0/1:23,0:23:63.22:618,0,63	1/1:21,1:22:37.35:1079,37,0	0/0:18,0:18:45.07:0,45,1574	0/0:35,0:35:87.20:0,87,3444	0/0:32,0:32:90.19:0,90,3335	1/1:13,0:11:29.98:267,30,0	1/1:18,4:22:39.75:675,40,0	1/1:22,2:24:34.54:413,35,0	0/1:14,0:12:7.74:160,0,8	1/1:20,1:21:28.95:416,29,0	1/1:23,0:23:6.77:258,7,0	1/1:25,2:26:55.72:1291,56,0	0/1:18,1:17:9.25:781,0,9	1/1:9,13:22:54.16:1442,54,0	1/1:3,2:5:14.72:287,15,0
chr10	96122523	.	TGTGTGTGC	T	13960.51	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=7.452;DP=567;FS=0.000;HRun=0;HaplotypeScore=185.4354;InbreedingCoeff=0.9847;MQ=50.45;MQ0=9;MQRankSum=-7.375;QD=35.52;ReadPosRankSum=1.001;VQSLOD=4.5738;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:75.75:0,76,2520	1/1:7,4:10:27:530,27,0	0/0:29,0:18:32.09:0,32,452	0/0:32,0:21:32.03:0,32,833	1/1:11,3:14:29.55:286,30,0	1/1:15,1:16:36.95:632,37,0	1/1:18,1:19:29.50:594,29,0	1/1:19,0:19:32.06:303,32,0	1/1:18,0:18:47.97:1124,48,0	1/1:16,0:16:45.05:834,45,0	1/1:12,1:13:18.04:400,18,0	1/1:14,3:17:14.63:587,15,0	1/1:14,3:17:35.98:735,36,0	1/1:22,1:23:34.88:1036,35,0	1/1:11,9:20:56.69:944,57,0	0/0:16,0:16:45.04:0,45,1263	0/0:33,0:33:84.12:0,84,2709	0/0:32,0:32:90.16:0,90,2684	1/1:13,0:11:32.90:275,33,0	1/1:21,1:22:40.38:540,40,0	1/1:25,0:25:41.37:400,41,0	1/1:14,0:12:12.50:264,12,0	1/1:19,1:20:29.36:607,29,0	1/1:24,0:24:32.90:537,33,0	1/1:16,10:25:68.49:1169,68,0	1/1:15,4:17:27.83:783,28,0	1/1:22,0:21:54.16:1175,54,0	1/1:5,0:5:14.69:204,15,0
chr10	96122525	.	TGTGTGC	T	11720.77	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=6.983;DP=546;FS=0.384;HRun=0;HaplotypeScore=167.4090;InbreedingCoeff=0.9870;MQ=50.76;MQ0=7;MQRankSum=-7.269;QD=30.84;ReadPosRankSum=1.128;VQSLOD=4.5942;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:69.62:0,70,1942	1/1:11,0:10:26.99:413,27,0	0/0:24,0:13:32.03:0,32,408	0/0:32,0:21:31.99:0,32,661	1/1:15,0:15:31.99:279,32,0	1/1:11,5:16:41.99:518,42,0	1/1:12,5:17:41.98:575,42,0	1/1:19,0:19:31.59:303,32,0	1/1:6,11:17:51.03:885,51,0	1/1:9,7:16:45.04:641,45,0	1/1:8,3:11:18.06:358,18,0	1/1:9,5:14:33.03:549,33,0	1/1:9,6:15:39.05:618,39,0	1/1:15,8:23:65.80:878,66,0	1/1:20,0:20:56.69:758,57,0	0/0:15,0:15:44.99:0,45,1003	0/0:31,0:31:78.12:0,78,2128	0/0:32,0:32:88.90:0,89,2108	1/1:11,0:11:32.90:275,33,0	1/1:21,0:21:36.30:443,36,0	1/1:27,0:27:44.16:395,44,0	1/1:12,3:13:11.40:184,11,0	1/1:14,4:18:29.48:458,29,0	1/1:16,5:21:35.29:421,35,0	1/1:26,0:25:68.97:942,69,0	1/1:18,1:17:46.29:687,46,0	1/1:23,0:22:57.15:965,57,0	1/1:5,0:5:14.69:176,15,0
chr10	96122529	.	TGC	T	7849.94	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=6.521;DP=550;FS=0.000;HRun=0;HaplotypeScore=144.0436;InbreedingCoeff=0.9822;MQ=55.32;MQ0=3;MQRankSum=-7.059;QD=20.44;ReadPosRankSum=1.196;VQSLOD=5.2202;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:57.42:0,57,837	1/1:10,0:10:26.95:242,27,0	0/0:28,0:16:35:0,35,338	0/0:31,0:20:25.49:0,25,365	1/1:15,0:15:26.83:241,27,0	1/1:16,0:16:37.93:310,38,0	1/1:17,0:17:41.94:369,42,0	1/1:20,0:20:40.60:387,41,0	1/1:17,0:17:50.93:454,51,0	1/1:17,0:17:51.01:481,51,0	1/1:7,4:11:18.02:171,18,0	1/1:13,1:14:33.04:324,33,0	1/1:16,0:16:41.87:371,42,0	1/1:24,0:24:71.37:595,71,0	1/1:21,0:21:58.82:481,59,0	0/0:14,0:14:35.95:0,36,450	0/0:31,0:31:43.81:0,44,937	0/0:32,0:32:67.65:0,68,935	1/1:11,0:11:32.90:275,33,0	1/1:21,0:21:43.05:355,43,0	1/1:28,0:28:47.18:393,47,0	1/1:4,10:14:9.01:87,9,0	1/1:17,0:17:32.78:274,33,0	1/1:22,1:23:36.44:307,36,0	1/1:26,0:25:68.90:605,69,0	1/1:18,0:17:50.96:464,51,0	1/1:23,0:22:57.07:543,57,0	1/1:5,0:5:14.68:120,15,0
chr10	96123405	.	CA	C	7588.98	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.714;DP=728;FS=0.293;HRun=5;HaplotypeScore=73.0516;InbreedingCoeff=0.9824;MQ=90.74;MQ0=0;MQRankSum=-2.931;QD=30.48;ReadPosRankSum=2.292;VQSLOD=5.4887;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,141,1928	1/1:1,12:13:36.10:408,36,0	0/0:26,0:26:72.20:0,72,958	0/0:33,0:33:81.01:0,81,985	1/1:2,19:21:54.15:611,54,0	0/0:28,0:28:72.22:0,72,954	0/0:29,0:29:87.22:0,87,1136	0/0:19,0:19:54.18:0,54,738	0/0:26,0:26:75.25:0,75,1022	0/0:22,0:22:60.20:0,60,820	0/0:4,0:4:6.02:0,6,82	0/0:28,0:28:84.25:0,84,1107	0/0:27,0:27:69.21:0,69,927	0/0:32,0:32:90.29:0,90,1215	1/1:4,35:39:99:1123,99,0	0/0:27,0:27:81.26:0,81,1091	0/0:35,0:35:99:0,105,1421	0/0:30,0:30:87.29:0,87,1187	1/1:0,17:17:51.15:578,51,0	1/1:2,20:22:54.15:613,54,0	1/1:3,59:62:99:1940,171,0	0/0:14,0:14:39.13:0,39,533	0/0:8,0:8:18.05:0,18,232	0/0:25,0:25:75.25:0,75,1024	1/1:0,20:20:60.17:680,60,0	1/1:3,28:31:43.14:854,43,0	1/1:0,24:24:69.20:783,69,0	0/0:14,0:14:39.13:0,39,533
chr10	96123875	.	A	AT	1810.68	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.744;DP=649;FS=4.222;HRun=6;HaplotypeScore=60.9211;InbreedingCoeff=0.9879;MQ=66.54;MQ0=0;MQRankSum=-4.498;QD=30.18;ReadPosRankSum=2.991;VQSLOD=4.4701;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:37:99:1321,105,0	0/0:6,0:6:18.04:0,18,184	0/0:15,0:13:17.85:0,18,156	0/0:17,0:17:45.54:0,46,427	0/0:26,0:26:69.14:0,69,696	0/0:25,0:25:69.16:0,69,704	0/0:29,0:29:78.15:0,78,788	0/0:27,0:27:66.12:0,66,668	0/0:18,0:18:54.04:0,54,538	0/0:22,0:22:54.12:0,54,551	0/0:18,0:18:51.10:0,51,513	0/0:27,0:27:75.15:0,75,757	0/0:35,0:35:87.19:0,87,887	0/0:29,0:29:81.18:0,81,825	0/0:37,0:37:99:0,99,1010	1/1:4,19:23:23.56:611,24,0	0/0:31,0:31:78.17:0,78,796	0/0:16,0:16:42.01:0,42,406	0/0:28,0:27:66.14:0,66,672	0/0:10,0:10:30.07:0,30,306	0/0:21,0:21:54.12:0,54,550	0/0:15,0:15:33.07:0,33,337	0/0:20,0:20:57.13:0,57,581	0/0:27,0:27:60.13:0,60,612	0/0:19,0:19:51.10:0,51,511	0/0:33,0:33:87.16:0,87,873	0/0:29,0:29:72.13:0,72,725	0/0:9,0:9:21.04:0,21,214
chr10	96125224	.	T	TA	4643.93	PASS	AB=0.900;AC=19;AF=0.339;AN=56;BaseQRankSum=-14.194;DP=513;FS=2.799;HRun=8;HaplotypeScore=64.3251;InbreedingCoeff=0.8934;MQ=73.67;MQ0=0;MQRankSum=-0.472;QD=26.39;ReadPosRankSum=-0.208;VQSLOD=5.5069;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.02:0,90,818	1/1:0,9:9:27.08:312,27,0	0/0:12,0:12:21.88:0,22,194	0/1:6,0:9:9.67:10,0,63	1/1:2,11:13:30.09:346,30,0	0/0:28,0:28:78.03:0,78,709	0/0:18,0:18:47.99:0,48,428	0/0:29,0:29:77.78:0,78,710	0/0:13,0:13:30.01:0,30,275	0/0:18,0:18:51.03:0,51,467	0/0:12,0:12:33:0,33,298	0/0:20,0:20:44.99:0,45,407	0/0:17,0:17:45.02:0,45,412	0/0:15,0:15:39.02:0,39,357	1/1:3,14:17:42.12:485,42,0	0/0:23,0:23:69.04:0,69,631	0/0:28,0:28:75.03:0,75,686	0/0:15,0:15:39.02:0,39,357	1/1:3,9:12:24.06:268,24,0	1/1:1,21:22:66.14:746,66,0	1/1:5,33:38:96.29:1108,96,0	0/0:15,0:15:39.01:0,39,357	0/0:14,0:14:42.02:0,42,384	0/0:24,0:24:54.02:0,54,494	1/1:2,14:16:33.10:381,33,0	1/1:6,10:16:5.63:319,6,0	1/1:4,20:24:60.13:670,60,0	0/0:2,0:2:6:0,6,55
chr10	96125343	.	C	CA	1272.45	PASS	AB=0.826;AC=29;AF=0.518;AN=56;BaseQRankSum=-0.700;DP=522;FS=3.373;HRun=17;HaplotypeScore=75.2519;InbreedingCoeff=0.1275;MQ=50.37;MQ0=26;MQRankSum=-0.183;QD=3.93;ReadPosRankSum=-2.001;VQSLOD=0.3433;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:33:33.17:0,33,108	1/1:6,1:7:11.75:79,12,0	0/0:22,1:8:11.67:0,12,54	0/1:13,0:5:5.49:5,0,17	1/1:11,4:17:8.67:125,9,0	0/1:6,7:13:0.72:65,0,1	0/1:11,3:14:9.78:35,0,10	0/0:19,0:23:25.56:0,26,100	0/1:8,0:9:6.64:7,0,9	0/1:16,5:23:7.96:130,0,8	1/1:6,2:10:8.82:59,9,0	0/1:13,3:20:23.14:41,0,23	1/1:12,3:13:18.74:108,19,0	0/1:10,0:10:3.73:38,0,4	1/1:16,4:18:5.36:118,5,0	0/0:11,0:22:19.82:0,20,71	0/0:50,3:53:19.02:0,19,277	0/0:23,0:24:18.82:0,19,95	1/1:18,3:20:5.34:116,5,0	0/1:15,2:19:22.07:66,0,22	0/1:11,2:13:13.12:71,0,13	0/1:12,1:15:5.86:26,0,6	0/1:9,3:12:10.07:35,0,10	0/1:13,5:17:20.83:21,0,26	0/1:10,6:15:10.29:81,0,10	1/1:15,2:16:21.04:141,21,0	1/1:8,4:16:11.81:82,12,0	0/0:5,0:8:6.90:0,7,27
chr10	96126565	.	T	TG	913.40	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-0.689;DP=162;FS=5.232;HRun=7;HaplotypeScore=26.1262;InbreedingCoeff=0.5617;MQ=101.76;MQ0=1;MQRankSum=-2.498;QD=9.04;ReadPosRankSum=2.589;VQSLOD=-0.2161;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:15.01:0,15,139	1/1:1,5:6:6.02:72,6,0	0/1:18,0:15:11.92:12,0,110	0/0:24,0:19:31.35:0,31,289	1/1:1,3:4:9.03:109,9,0	1/1:2,0:6:11.46:58,11,0	1/1:3,0:8:5.72:28,6,0	0/0:10,0:10:27.04:0,27,260	0/0:1,0:1:2.37:0,2,8	1/1:3,0:5:5.72:29,6,0	1/1:2,0:6:7.27:33,7,0	1/1:5,0:5:2.37:8,2,0	1/1:2,0:3:2.60:10,3,0	1/1:1,0:5:8.63:44,9,0	1/1:0,4:4:3.01:36,3,0	0/0:4,0:4:9.01:0,9,87	0/0:7,0:7:18.02:0,18,174	0/0:8,0:8:21.03:0,21,203	1/1:0,1:1:3.01:36,3,0	1/1:0,3:3:9.03:109,9,0	1/1:4,5:9:9.03:109,9,0	1/1:0,0:1:2.84:14,3,0	1/1:1,0:4:8.59:44,9,0	1/1:1,0:2:2.88:15,3,0	1/1:1,3:4:9.03:109,9,0	1/1:1,5:6:15.05:181,15,0	1/1:1,0:1:3.01:35,3,0	0/0:1,0:1:3:0,3,27
chr10	96126732	.	C	CTTT	4363.53	PASS	AB=0.850;AC=45;AF=0.804;AN=56;BaseQRankSum=1.897;DP=421;FS=0.678;HRun=16;HaplotypeScore=83.1254;InbreedingCoeff=0.4877;MQ=73.66;MQ0=4;MQRankSum=-3.881;QD=13.03;ReadPosRankSum=-5.616;VQSLOD=0.9538;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:38:14.55:0,15,425	1/1:0,3:4:6.02:99,6,0	0/1:26,0:10:29.91:30,0,31	0/1:24,0:13:9.26:9,0,40	1/1:10,0:10:9.61:93,10,0	1/1:8,2:16:6.02:93,6,0	1/1:9,6:16:15.05:203,15,0	1/1:17,0:31:6.14:191,6,0	1/1:9,8:18:32.11:422,32,0	1/1:8,1:13:17.99:205,18,0	1/1:5,0:8:10.98:89,11,0	1/1:4,3:9:15.05:197,15,0	1/1:4,3:9:15.05:215,15,0	1/1:12,2:18:27.09:382,27,0	1/1:3,8:15:15:194,15,0	0/0:7,0:9:20.75:0,21,184	0/0:14,0:20:3.45:0,3,194	0/0:17,0:19:22.80:0,23,212	1/1:2,3:14:27.04:362,27,0	1/1:3,1:11:24:288,24,0	1/1:3,5:10:6.02:99,6,0	1/1:3,0:3:6.02:89,6,0	1/1:1,4:7:10.59:148,11,0	1/1:5,0:8:3.01:39,3,0	1/1:5,1:13:14.99:163,15,0	1/1:6,3:12:18.18:270,18,0	1/1:6,9:18:28.55:377,29,0	0/1:5,1:17:11.79:105,0,12
chr10	96127429	.	AC	A	7878.05	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=16.993;DP=682;FS=1.717;HRun=2;HaplotypeScore=105.2979;InbreedingCoeff=0.9999;MQ=84.64;MQ0=0;MQRankSum=-2.385;QD=35.17;ReadPosRankSum=2.768;VQSLOD=4.9453;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1789	1/1:0,11:11:33.11:428,33,0	0/0:22,0:22:66.22:0,66,958	0/0:24,0:24:71.48:0,71,937	1/1:0,24:25:66.21:856,66,0	0/0:16,0:16:48.16:0,48,701	0/0:21,0:21:63.15:0,63,880	0/0:25,0:25:69.22:0,69,997	0/0:20,0:20:60.20:0,60,894	0/0:24,0:24:69.22:0,69,1010	0/0:15,0:15:42.13:0,42,606	0/0:29,0:29:84.25:0,84,1215	0/0:30,0:30:90.28:0,90,1302	0/0:20,0:20:60.19:0,60,868	1/1:1,38:39:99:1310,102,0	0/0:29,0:29:84.27:0,84,1238	0/0:50,0:50:99:0,147,2178	0/0:31,0:31:90.25:0,90,1285	1/1:0,19:19:57.16:723,57,0	1/1:3,19:22:60.14:759,60,0	1/1:0,50:51:99:1778,138,0	0/0:15,0:15:45.13:0,45,651	0/0:20,0:20:57.09:0,57,803	0/0:17,0:17:48.16:0,48,716	1/1:0,16:16:42.14:545,42,0	1/1:0,25:26:78.19:975,78,0	1/1:0,15:15:39.13:504,39,0	0/0:10,0:10:30.10:0,30,449
chr10	96127606	.	G	GA	10443.71	PASS	AB=0.600;AC=42;AF=0.750;AN=56;BaseQRankSum=-10.971;DP=768;FS=1.873;HRun=10;HaplotypeScore=81.4624;InbreedingCoeff=0.7997;MQ=74.55;MQ0=0;MQRankSum=-1.581;QD=19.59;ReadPosRankSum=0.389;VQSLOD=5.5224;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:75,1:79:99:0,151,1393	1/1:0,10:10:24.06:254,24,0	0/0:34,0:27:22.57:0,23,206	0/0:27,0:23:26.41:0,26,215	0/1:12,19:31:27.37:478,0,27	1/1:5,22:27:54.14:572,54,0	1/1:7,20:28:29.34:498,29,0	1/1:7,28:35:25.69:592,26,0	1/1:2,17:19:36.09:381,36,0	1/1:3,24:27:70.70:663,71,0	1/1:4,17:22:38.83:369,39,0	1/1:3,25:28:32.52:545,33,0	1/1:3,17:21:44.90:446,45,0	1/1:6,17:23:14.45:349,14,0	1/1:5,25:30:59.94:635,60,0	0/0:28,0:28:71.85:0,72,583	0/0:40,0:40:99:0,114,932	0/0:24,0:24:53.16:0,53,418	1/1:8,11:19:8.37:271,8,0	1/1:6,23:30:25.64:565,26,0	1/1:6,21:27:26.50:484,26,0	1/1:3,22:25:65.86:668,66,0	1/1:3,22:25:57.14:604,57,0	0/1:3,13:18:10.56:316,0,11	1/1:1,18:21:47.79:473,48,0	1/1:7,17:24:42.07:429,42,0	1/1:5,19:25:57.14:603,57,0	1/1:2,15:18:19.11:247,19,0
chr10	96128100	.	AGAACC	A	2466.54	PASS	AB=0.930;AC=19;AF=0.339;AN=56;BaseQRankSum=4.725;DP=487;FS=58.879;HRun=0;HaplotypeScore=84.7336;InbreedingCoeff=-0.5421;MQ=41.19;MQ0=18;MQRankSum=-4.125;QD=7.52;ReadPosRankSum=-1.131;VQSLOD=-0.6089;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:27:78.24:0,78,1734	0/1:4,0:4:56.12:56,0,141	0/0:5,0:3:2.71:0,3,65	0/1:4,0:3:19.65:20,0,53	0/1:23,0:23:36.65:37,0,334	0/1:20,0:18:21.89:22,0,538	0/1:12,0:10:8.23:8,0,354	0/1:29,1:28:99:156,0,686	0/0:14,0:12:3.53:0,4,383	0/1:24,0:20:99:241,0,661	0/1:16,0:13:65.94:66,0,330	0/1:16,2:16:99:176,0,363	0/0:12,0:10:18.04:0,18,328	0/1:13,0:11:12.94:13,0,367	0/1:24,3:27:99:390,0,891	0/0:22,0:21:60.03:0,60,1270	0/0:34,0:31:90.31:0,90,2241	0/0:24,0:22:59.93:0,60,1122	0/1:19,4:22:99:281,0,638	0/1:17,1:17:99:204,0,552	0/1:3,2:5:46.61:47,0,121	0/1:8,0:8:43.10:43,0,155	0/1:22,1:22:99:175,0,662	0/0:7,0:7:5.98:0,6,71	0/1:21,3:24:99:149,0,187	0/1:14,3:16:99:269,0,506	0/1:15,3:16:99:270,0,416	0/0:9,0:8:20.92:0,21,312
chr10	96128518	.	T	TA	1110.56	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.794;DP=660;FS=0.000;HRun=6;HaplotypeScore=75.2992;InbreedingCoeff=0.9839;MQ=79.31;MQ0=0;MQRankSum=-1.400;QD=27.09;ReadPosRankSum=-2.103;VQSLOD=3.1200;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,144,1461	0/0:13,0:13:36.08:0,36,367	0/0:20,0:20:51.04:0,51,494	0/0:16,0:16:39.05:0,39,386	0/0:21,0:21:45.09:0,45,459	0/0:26,0:26:69.15:0,69,704	0/0:22,0:22:60.14:0,60,612	1/1:5,25:30:69.21:855,69,0	0/0:26,0:26:66.15:0,66,673	0/0:22,0:22:42.08:0,42,429	0/0:24,0:24:57.13:0,57,582	0/0:18,0:18:51.11:0,51,520	0/0:17,0:17:48.11:0,48,490	0/0:23,0:23:66.14:0,66,667	0/0:26,0:26:69.14:0,69,697	0/0:30,0:30:84.19:0,84,857	0/0:29,0:29:84.19:0,84,857	0/0:21,0:21:57.13:0,57,581	0/0:30,0:30:75.15:0,75,758	0/0:25,0:25:63.14:0,63,643	0/0:32,0:32:90.17:0,90,909	0/0:14,0:14:39.09:0,39,398	0/0:8,0:8:12.02:0,12,122	0/0:29,0:29:84.14:0,84,840	0/0:24,0:24:51.11:0,51,520	0/0:29,0:29:78.17:0,78,796	0/0:19,0:18:51.12:0,51,520	1/1:1,10:11:30.10:377,30,0
chr10	96128696	.	TTTTA	T	1265.34	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.502;DP=527;FS=9.190;HRun=0;HaplotypeScore=83.6980;InbreedingCoeff=0.9820;MQ=67.85;MQ0=1;MQRankSum=-3.870;QD=32.44;ReadPosRankSum=-0.468;VQSLOD=2.4294;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.30:0,96,2332	0/0:6,0:6:15.05:0,15,364	0/0:17,0:14:37.44:0,37,722	0/0:9,0:6:15.02:0,15,287	0/0:20,0:20:60.21:0,60,1509	0/0:18,0:18:48.15:0,48,1172	0/0:18,0:18:48.06:0,48,1107	1/1:10,16:26:48.12:744,48,0	0/0:14,0:14:30.10:0,30,753	0/0:14,0:14:38.91:0,39,953	0/0:19,0:19:54.17:0,54,1281	0/0:11,0:11:33.11:0,33,842	0/0:9,0:9:24.08:0,24,617	0/0:23,0:23:63.20:0,63,1506	0/0:25,0:25:69.24:0,69,1752	0/0:30,0:30:81.28:0,81,2030	0/0:25,0:25:69.24:0,69,1773	0/0:21,0:20:54.18:0,54,1385	0/0:24,0:24:60.19:0,60,1417	0/0:24,0:24:66.23:0,66,1666	0/0:16,0:16:45.15:0,45,1126	0/0:10,0:10:30.10:0,30,750	0/0:21,0:21:57.20:0,57,1455	0/0:17,0:17:48.16:0,48,1191	0/0:18,0:18:54.19:0,54,1355	0/0:16,0:16:48.16:0,48,1142	0/0:29,0:29:78.27:0,78,1961	1/1:0,13:13:36.12:643,36,0
chr10	96128920	.	T	TAA	2417.36	PASS	AB=0.785;AC=33;AF=0.589;AN=56;BaseQRankSum=-1.133;DP=516;FS=1.840;HRun=16;HaplotypeScore=88.4491;InbreedingCoeff=0.3490;MQ=61.23;MQ0=3;MQRankSum=-0.331;QD=6.70;ReadPosRankSum=-4.803;VQSLOD=-0.7218;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:30:39.26:0,39,288	1/1:9,0:9:12.94:83,13,0	0/0:14,0:6:8.44:0,8,52	0/1:11,0:7:14.36:16,0,14	0/1:11,0:10:6.85:56,0,7	0/1:9,10:24:3.27:117,0,3	1/1:7,3:19:21.72:152,22,0	0/0:3,0:23:49.61:0,50,208	1/1:3,8:13:14.02:127,14,0	0/1:13,7:25:16.84:157,0,17	0/1:6,2:20:17.34:130,0,17	1/1:4,15:22:22.29:209,22,0	0/1:6,12:21:7.43:116,0,7	0/1:6,12:19:1.70:161,0,2	0/1:29,0:29:21.34:136,0,21	0/0:17,0:24:31.23:0,31,200	0/0:23,0:26:49.41:0,49,343	0/0:21,0:23:25.52:0,26,174	0/1:19,0:19:15.88:136,0,16	1/1:12,0:12:8.92:75,9,0	1/1:7,0:7:3.45:23,3,0	1/1:1,0:8:15.51:95,16,0	1/1:4,11:16:15.46:159,15,0	1/1:4,7:15:16.85:140,17,0	1/1:15,0:14:7.16:201,7,0	1/1:14,0:14:16.41:103,16,0	1/1:31,0:30:25.70:217,26,0	0/0:6,0:13:15.85:0,16,68
chr10	96129896	.	CA	C	5110.21	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=10.662;DP=443;FS=8.279;HRun=4;HaplotypeScore=46.3189;InbreedingCoeff=0.9756;MQ=86.08;MQ0=0;MQRankSum=-1.570;QD=32.97;ReadPosRankSum=2.042;VQSLOD=5.1049;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.25:0,75,1050	0/0:14,0:14:42.14:0,42,587	0/0:14,0:14:39.07:0,39,483	0/0:14,0:14:31.31:0,31,437	0/0:16,0:16:45.15:0,45,627	1/1:1,6:7:18.05:216,18,0	1/1:0,31:31:90.28:1080,90,0	0/0:9,0:9:24.08:0,24,333	1/1:0,8:8:24.07:288,24,0	1/1:0,19:19:57.13:647,57,0	1/1:0,9:9:24.07:288,24,0	1/1:0,14:14:39.12:468,39,0	1/1:0,9:9:24.07:288,24,0	1/1:2,14:16:39.12:468,39,0	0/0:4,0:4:12.02:0,12,138	0/0:9,0:9:27.09:0,27,378	0/0:42,0:42:99:0,123,1649	0/0:30,0:30:90.26:0,90,1238	0/0:17,0:17:45.13:0,45,594	0/0:3,0:3:6.02:0,6,84	0/0:45,0:45:99:0,126,1741	1/1:1,9:10:18.05:216,18,0	1/1:0,7:7:21.06:252,21,0	1/1:0,25:25:75.23:900,75,0	0/0:14,0:14:39.13:0,39,545	0/0:15,0:15:36.12:0,36,504	0/0:9,0:9:27.06:0,27,357	0/0:7,0:7:21.07:0,21,293
chr10	96130488	.	TTG	T	8950.15	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.741;DP=645;FS=3.594;HRun=0;HaplotypeScore=77.1658;InbreedingCoeff=0.9975;MQ=82.53;MQ0=3;MQRankSum=1.102;QD=39.78;ReadPosRankSum=4.079;VQSLOD=6.8302;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.19:0,57,1033	0/0:15,0:15:45.03:0,45,751	0/0:24,0:24:59.34:0,59,1035	0/0:14,0:14:14.94:0,15,498	0/0:17,0:17:51.17:0,51,919	1/1:0,18:18:48.16:734,48,0	1/1:0,18:18:51.17:781,51,0	0/0:31,0:30:84.24:0,84,1435	1/1:0,12:12:30.10:457,30,0	1/1:0,27:27:81.21:1135,81,0	1/1:0,15:15:42.07:591,42,0	1/1:3,30:33:75.25:1148,75,0	1/1:0,20:20:48.16:733,48,0	1/1:0,16:16:42.14:643,42,0	0/0:26,0:26:78.24:0,78,1343	0/0:32,1:33:50.39:0,50,1598	0/0:28,0:26:78.23:0,78,1315	0/0:11,0:11:33.11:0,33,603	0/0:24,0:24:69.17:0,69,1165	0/0:27,0:27:81.16:0,81,1353	0/0:26,0:26:75.23:0,75,1330	1/1:0,21:20:60.16:892,60,0	1/1:0,27:27:75.25:1148,75,0	1/1:0,18:18:45.15:689,45,0	0/0:38,0:38:99:0,114,1965	0/0:39,0:39:99:0,114,2042	0/0:30,0:30:81.27:0,81,1481	0/0:17,0:17:51.17:0,51,926
chr10	96133203	.	C	CAA	5110.85	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=2.400;DP=696;FS=0.454;HRun=12;HaplotypeScore=133.3493;InbreedingCoeff=0.8529;MQ=72.75;MQ0=7;MQRankSum=-4.240;QD=10.24;ReadPosRankSum=-0.314;VQSLOD=2.8977;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:23.56:0,24,240	1/1:11,0:12:14.38:119,14,0	0/0:43,0:28:19.12:0,19,109	0/1:39,0:22:10.06:10,0,20	1/1:27,0:28:41.39:296,41,0	1/1:4,17:22:18.05:239,18,0	1/1:16,1:18:31.24:294,31,0	0/0:20,0:33:25.39:0,25,186	1/1:8,10:19:15.04:193,15,0	1/1:8,13:24:38.19:379,38,0	1/1:3,14:19:26.15:279,26,0	1/1:17,5:24:40.62:475,41,0	1/1:5,15:21:23.55:286,24,0	1/1:6,2:19:15.45:147,15,0	1/1:33,0:35:41.69:312,42,0	0/0:33,0:35:52.46:0,52,519	0/0:21,0:22:44.98:0,45,344	0/0:18,0:18:40.14:0,40,348	1/1:19,0:20:34.34:232,34,0	1/1:16,0:22:37.86:297,38,0	1/1:9,0:9:0.47:1,0,0	1/1:5,9:13:13.48:118,13,0	1/1:6,22:30:4.44:337,4,0	1/1:7,18:23:20.74:260,21,0	1/1:28,0:33:39.41:297,39,0	1/1:22,0:21:28.44:181,28,0	1/1:36,0:40:47.86:358,48,0	0/0:15,0:22:22.72:0,23,100
chr10	96134564	.	A	AGT	467.96	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=-4.801;DP=738;FS=1.222;HRun=0;HaplotypeScore=91.8573;InbreedingCoeff=0.8651;MQ=47.09;MQ0=109;MQRankSum=1.772;QD=39.00;ReadPosRankSum=0.668;VQSLOD=5.3402;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:20:54.18:0,54,795	0/0:15,0:15:39.13:0,39,574	./.	./.	0/0:49,0:46:99:0,117,1702	0/0:14,0:12:18.04:0,18,244	0/0:25,0:23:36.12:0,36,529	0/0:66,0:7:21.07:0,21,306	0/0:9,0:8:9.03:0,9,133	0/0:25,0:19:54.18:0,54,790	0/0:8,0:7:15.05:0,15,221	0/0:10,0:10:21.07:0,21,308	0/0:12,0:12:33.11:0,33,485	0/0:16,0:16:30.10:0,30,441	0/0:62,0:57:99:0,132,1924	0/0:39,0:39:99:0,99,1420	1/1:1,11:11:30.10:562,30,0	0/0:18,0:17:42.14:0,42,618	0/0:27,0:11:30.10:0,30,442	0/0:64,0:60:99:0,172,2518	0/0:31,0:25:69.23:0,69,1006	0/0:26,0:24:42.14:0,42,618	0/0:13,0:13:33.11:0,33,486	0/0:4,0:4:9.03:0,9,133	0/0:33,0:30:75.25:0,75,1113	0/0:52,0:47:99:0,138,2023	0/0:40,0:38:99:0,99,1458	0/0:7,0:7:21.07:0,21,309
chr10	96134621	.	TACTC	T	5998.10	PASS	AB=0.763;AC=9;AF=0.237;AN=38;BaseQRankSum=-2.873;DP=712;FS=12.960;HRun=0;HaplotypeScore=107.6096;InbreedingCoeff=-0.3616;MQ=50.71;MQ0=128;MQRankSum=0.936;QD=13.27;ReadPosRankSum=0.839;VQSLOD=3.3329;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:16:33.09:0,33,860	0/1:10,7:17:99:329,0,525	0/0:15,0:5:15.02:0,15,289	0/0:10,0:6:15.04:0,15,310	0/1:22,33:53:99:1201,0,1178	./.	0/0:5,0:2:3.01:0,3,83	./.	./.	0/0:12,0:6:18.06:0,18,484	./.	0/0:14,0:7:3.01:0,3,83	./.	./.	0/1:32,40:66:99:553,0,1777	0/0:33,0:30:53.78:0,54,1448	0/0:8,0:8:18.03:0,18,418	0/0:23,0:19:39.07:0,39,902	0/1:26,7:19:99:367,0,672	0/1:53,29:77:99:1703,0,2501	0/1:34,4:28:99:139,0,1242	./.	0/0:5,0:4:3.01:0,3,83	./.	0/1:27,8:33:99:476,0,1058	0/1:51,16:62:99:775,0,2552	0/1:40,13:47:99:456,0,1541	./.
chr10	96134848	.	T	TC	2570.16	PASS	AB=0.770;AC=10;AF=0.200;AN=50;BaseQRankSum=-0.686;DP=1219;FS=6.640;HRun=1;HaplotypeScore=63.7285;InbreedingCoeff=-0.0351;MQ=25.86;MQ0=337;MQRankSum=2.365;QD=5.19;ReadPosRankSum=1.205;VQSLOD=0.4134;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:9:9.03:0,9,117	0/0:10,3:3:3.01:0,3,39	./.	./.	0/1:21,34:32:9.62:413,0,10	0/0:63,0:24:30.10:0,30,389	./.	0/0:31,0:9:24.08:0,24,312	0/0:59,0:26:27.09:0,27,351	0/0:67,0:22:60.16:0,60,747	0/0:45,0:22:12.03:0,12,156	0/0:77,0:29:21.07:0,21,273	0/0:59,0:27:15.03:0,15,195	0/0:38,0:17:18.06:0,18,233	1/1:11,25:25:21.07:315,21,0	0/1:94,31:55:77.22:859,0,77	0/0:13,0:10:12.04:0,12,156	0/0:19,0:15:18.06:0,18,232	0/1:35,10:17:99:132,0,419	0/1:71,19:43:99:355,0,167	0/1:17,7:13:56.89:204,0,57	0/0:64,0:26:15.05:0,15,195	0/0:58,0:22:24.08:0,24,311	0/0:22,0:6:6.02:0,6,78	0/1:16,11:15:23.64:165,0,24	0/1:34,9:16:44.76:45,0,461	0/1:36,14:25:99:227,0,165	0/0:12,0:8:6.02:0,6,78
chr10	96134948	.	AC	A	7237.98	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=10.255;DP=718;FS=3.075;HRun=4;HaplotypeScore=104.8440;InbreedingCoeff=0.9974;MQ=82.63;MQ0=0;MQRankSum=0.096;QD=29.54;ReadPosRankSum=3.512;VQSLOD=4.6067;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39.09:0,39,523	1/1:1,17:18:51.16:612,51,0	0/0:25,0:25:69.22:0,69,940	0/0:28,0:28:75.25:0,75,1042	1/1:5,34:39:92.30:1092,92,0	0/0:35,0:35:87.29:0,87,1212	0/0:17,0:17:45.12:0,45,608	0/0:35,0:35:96.31:0,96,1320	0/0:29,0:29:78.26:0,78,1084	0/0:24,0:24:66.21:0,66,906	0/0:20,0:20:36.10:0,36,474	0/0:44,0:44:99:0,120,1640	0/0:36,0:36:90.25:0,90,1233	0/0:23,0:23:48.16:0,48,671	1/1:2,24:26:69.21:825,69,0	0/0:32,0:32:87.18:0,87,1140	0/0:12,0:12:33.09:0,33,444	0/0:12,0:12:30.09:0,30,403	1/1:4,15:19:48.15:575,48,0	1/1:4,24:28:64.26:885,64,0	1/1:1,26:27:72.22:864,72,0	0/0:30,0:30:60.20:0,60,835	0/0:24,0:24:54.03:0,54,666	0/0:20,0:20:57.19:0,57,797	1/1:5,31:36:75.23:899,75,0	1/1:3,18:21:15.17:587,15,0	1/1:0,31:31:75.08:899,75,0	0/0:13,0:13:39.13:0,39,546
chr10	96137058	.	T	TA	4004.44	PASS	AB=0.923;AC=19;AF=0.339;AN=56;BaseQRankSum=-0.257;DP=676;FS=3.103;HRun=11;HaplotypeScore=137.5879;InbreedingCoeff=0.8963;MQ=75.43;MQ0=0;MQRankSum=-1.489;QD=16.69;ReadPosRankSum=-2.367;VQSLOD=2.3015;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:29:16.77:0,17,423	1/1:0,6:6:18.04:183,18,0	0/0:15,0:17:9.19:0,9,76	0/0:25,0:25:29.51:0,30,191	1/1:10,12:22:12.82:305,13,0	0/0:24,0:24:53.55:0,54,397	0/0:25,0:25:56.73:0,57,441	0/0:44,0:44:86.55:0,87,667	0/0:21,1:22:17.38:0,17,318	0/0:30,0:30:59.44:0,59,447	0/0:20,0:20:38.59:0,39,269	0/0:27,0:27:56.67:0,57,436	0/0:28,0:28:50.61:0,51,383	0/0:25,0:26:44.72:0,45,348	1/1:16,20:37:46.41:748,46,0	0/0:42,0:42:92.55:0,93,717	0/0:24,0:25:52.73:0,53,397	0/0:14,0:15:31.53:0,32,251	1/1:16,5:21:5.83:250,6,0	1/1:10,13:24:56.62:498,57,0	1/1:10,13:23:56.97:542,57,0	0/0:12,0:12:20.83:0,21,157	0/1:11,1:12:3.81:4,0,73	0/0:13,0:13:23.86:0,24,182	1/1:13,11:24:44.93:417,45,0	1/1:19,13:32:29.48:424,29,0	1/1:21,18:39:14.26:635,14,0	0/0:12,0:12:8.90:0,9,67
chr10	96137116	.	TGTTTCCCCA	T	40084.89	PASS	AB=0.519;AC=43;AF=0.768;AN=56;BaseQRankSum=14.548;DP=661;FS=1.118;HRun=0;HaplotypeScore=229.6731;InbreedingCoeff=0.8648;MQ=68.24;MQ0=0;MQRankSum=-17.113;QD=77.83;ReadPosRankSum=0.067;VQSLOD=4.7360;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.29:0,84,3856	1/1:0,9:9:27.09:846,27,0	0/0:22,0:22:66.12:0,66,2474	0/0:11,0:11:30.10:0,30,1265	1/1:1,29:30:78.18:2385,78,0	1/1:1,25:26:69.24:2166,69,0	1/1:5,17:22:51.18:1602,51,0	1/1:4,40:44:99:3642,120,0	0/1:2,25:27:70.15:2199,0,70	1/1:2,28:30:81.28:2556,81,0	1/1:1,21:22:60.21:1852,60,0	1/1:3,22:25:63.22:1976,63,0	1/1:6,29:34:75.26:2364,75,0	1/1:3,18:21:57.20:1786,57,0	1/1:3,22:25:63.22:1986,63,0	0/0:45,0:45:99:0,135,6464	0/0:25,0:25:75.26:0,75,3567	0/0:13,0:13:39.13:0,39,1935	1/1:5,9:14:27.05:776,27,0	1/1:1,26:27:72.25:2248,72,0	1/1:2,11:13:15.05:468,15,0	1/1:2,17:19:42.14:1308,42,0	1/1:0,17:17:48.16:1514,48,0	1/1:2,11:13:21.07:663,21,0	1/1:5,26:31:78.27:2413,78,0	1/1:3,25:28:75.26:2306,75,0	1/1:2,34:36:93.32:2934,93,0	1/1:0,1:1:3.01:95,3,0
chr10	96137467	.	C	CAA	1215.18	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-5.834;DP=670;FS=1.324;HRun=10;HaplotypeScore=84.9331;InbreedingCoeff=0.7888;MQ=69.72;MQ0=0;MQRankSum=-0.239;QD=21.70;ReadPosRankSum=-1.834;VQSLOD=2.8518;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:71.75:0,72,775	0/0:9,0:12:2.22:0,2,187	0/0:14,0:14:14.52:0,15,118	0/1:10,0:10:0.75:1,0,74	0/0:36,0:36:75.10:0,75,760	0/0:22,0:22:48:0,48,473	0/0:26,0:28:71.83:0,72,697	1/1:8,20:31:66.14:880,66,0	0/0:27,0:27:66.09:0,66,665	0/0:16,0:17:44.82:0,45,439	0/0:25,0:25:57.07:0,57,579	0/0:27,0:27:69.05:0,69,682	0/0:24,0:25:62.86:0,63,622	0/0:13,0:14:41.83:0,42,408	0/0:32,0:33:74.80:0,75,738	0/0:38,0:39:98.90:0,99,981	0/0:22,0:22:57.08:0,57,580	0/0:14,0:15:33.05:0,33,336	0/0:22,0:23:56.81:0,57,554	0/0:30,0:30:60.06:0,60,609	0/0:30,0:30:80.72:0,81,823	0/0:33,0:34:86.84:0,87,847	0/0:25,0:25:69.13:0,69,694	0/0:14,0:15:38.81:0,39,378	0/0:20,0:20:44.85:0,45,439	0/0:20,0:20:54.10:0,54,549	0/0:27,0:28:74.84:0,75,734	1/1:3,10:14:32.60:456,33,0
chr10	96137929	.	AG	A	6272.21	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=12.179;DP=523;FS=0.355;HRun=3;HaplotypeScore=51.6346;InbreedingCoeff=0.9888;MQ=81.74;MQ0=0;MQRankSum=-1.947;QD=33.54;ReadPosRankSum=1.349;VQSLOD=4.9997;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:93.27:0,93,1284	0/0:7,0:7:21.07:0,21,302	0/0:12,0:12:36.10:0,36,467	0/0:16,0:16:47.90:0,48,657	0/0:12,0:12:36.12:0,36,518	1/1:0,18:18:54.17:670,54,0	1/1:0,29:29:69.22:856,69,0	0/0:25,0:25:66.21:0,66,934	1/1:2,14:16:39.12:484,39,0	1/1:0,13:13:36.10:433,36,0	1/1:0,11:11:33.10:409,33,0	1/1:0,33:33:99:1228,99,0	1/1:1,13:14:36.11:446,36,0	1/1:1,21:22:63.20:781,63,0	0/0:24,0:24:66.22:0,66,951	0/0:14,0:14:42.13:0,42,588	0/0:30,0:30:90.28:0,90,1259	0/0:35,0:35:99:0,105,1492	0/0:16,0:16:48.16:0,48,691	0/0:14,0:14:39.13:0,39,562	0/0:42,0:42:99:0,126,1770	1/1:0,13:13:36.11:446,36,0	1/1:0,6:6:18.06:223,18,0	1/1:2,10:12:24.07:298,24,0	0/0:14,0:14:39.13:0,39,562	0/0:18,1:19:19.99:0,20,740	0/0:20,0:20:60.20:0,60,862	0/0:4,0:4:9.03:0,9,130
chr10	96140186	.	C	CAG	15298.68	PASS	AB=0.941;AC=23;AF=0.411;AN=56;BaseQRankSum=-15.117;DP=716;FS=6.274;HRun=0;HaplotypeScore=85.5884;InbreedingCoeff=0.9325;MQ=81.09;MQ0=1;MQRankSum=-2.790;QD=46.78;ReadPosRankSum=4.029;VQSLOD=6.0129;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1540	0/0:11,0:11:33.10:0,33,478	0/0:16,0:16:45.12:0,45,639	0/0:23,0:23:69.01:0,69,983	0/0:31,0:31:87.28:0,87,1297	1/1:0,30:30:78.27:1507,78,0	1/1:4,29:33:81.28:1546,81,0	0/0:33,0:33:90.31:0,90,1374	1/1:0,22:22:54.19:1042,54,0	1/1:1,27:28:81.24:1485,81,0	1/1:2,20:23:57.09:1099,57,0	1/1:4,37:41:99:2066,108,0	1/1:0,27:27:69.24:1332,69,0	1/1:0,31:31:78.27:1506,78,0	0/0:39,0:39:99:0,117,1769	0/0:39,0:39:99:0,114,1725	0/0:21,0:21:63.20:0,63,941	0/0:19,0:19:57.16:0,57,847	0/0:17,0:17:51.15:0,51,739	0/0:16,0:16:48.16:0,48,733	0/0:35,0:35:99:0,102,1557	1/1:2,15:17:42.14:811,42,0	1/1:1,25:26:72.25:1389,72,0	1/1:4,29:32:78.27:1506,78,0	0/0:19,0:19:57.16:0,57,830	0/1:15,1:16:9.83:10,0,621	0/0:29,0:28:87.30:0,87,1326	0/0:7,0:7:21.03:0,21,277
chr10	96143101	.	AT	A	16153.54	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=10.983;DP=674;FS=10.807;HRun=5;HaplotypeScore=67.0678;InbreedingCoeff=0.9987;MQ=84.99;MQ0=0;MQRankSum=-3.923;QD=30.77;ReadPosRankSum=2.727;VQSLOD=5.0440;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.28:0,96,1279	1/1:0,16:16:48.14:544,48,0	0/0:16,0:16:41.61:0,42,517	0/0:26,0:26:72.02:0,72,920	1/1:2,47:49:99:1463,129,0	1/1:0,19:19:57.16:646,57,0	1/1:0,20:20:60.17:680,60,0	1/1:3,36:39:99:1224,108,0	1/1:4,20:24:57.16:647,57,0	1/1:0,29:29:84.24:952,84,0	1/1:0,17:17:48.14:544,48,0	1/1:0,22:22:63.18:715,63,0	1/1:0,25:25:66.19:749,66,0	1/1:0,25:25:72.21:816,72,0	1/1:3,21:24:60.17:681,60,0	0/0:23,0:23:63.21:0,63,859	0/0:24,0:24:72.24:0,72,982	0/0:26,0:26:72.24:0,72,981	1/1:3,23:26:69.18:774,69,0	1/1:0,18:18:48.13:544,48,0	1/1:0,35:35:99:1157,102,0	1/1:0,14:14:33.09:374,33,0	1/1:3,8:11:21.06:238,21,0	1/1:0,19:19:51.15:579,51,0	1/1:2,22:24:60.17:681,60,0	1/1:1,32:33:96.27:1089,96,0	1/1:2,24:26:69.20:783,69,0	1/1:2,8:10:24.07:272,24,0
chr10	96143256	.	T	TTTTTG	10437.24	PASS	AB=0.600;AC=21;AF=0.375;AN=56;BaseQRankSum=-12.749;DP=645;FS=3.311;HRun=0;HaplotypeScore=127.3500;InbreedingCoeff=0.9155;MQ=68.21;MQ0=1;MQRankSum=-1.542;QD=46.18;ReadPosRankSum=2.141;VQSLOD=4.9157;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:93.28:0,93,1646	0/0:7,0:7:21.03:0,21,327	0/0:30,0:25:10.35:0,10,255	0/0:22,0:19:18.94:0,19,339	0/0:36,0:36:77.61:0,78,1380	1/1:5,15:24:48.16:1366,48,0	1/1:6,13:21:27.09:772,27,0	0/0:29,0:29:48.06:0,48,764	1/1:6,14:21:39.13:1117,39,0	1/1:10,14:26:41.94:938,42,0	1/1:3,6:10:21.07:549,21,0	1/1:8,15:25:33.11:944,33,0	0/1:8,14:24:17.01:974,0,17	1/1:5,11:19:36.12:1028,36,0	0/0:31,0:31:84.28:0,84,1543	0/0:29,0:29:66.22:0,66,1205	0/0:27,0:27:72.22:0,72,1285	0/0:25,0:25:63.04:0,63,1071	0/0:19,0:19:39.11:0,39,664	0/0:28,0:28:57.18:0,57,1035	0/0:24,0:24:63.17:0,63,1098	1/1:6,12:20:38.91:917,39,0	1/1:5,6:12:21.07:543,21,0	1/1:4,16:24:45.15:1290,45,0	0/0:20,0:20:57.19:0,57,1033	0/0:24,0:24:63.13:0,63,1028	0/0:19,0:19:39.12:0,39,684	0/0:8,0:8:21.07:0,21,393
chr10	96144736	.	G	GTCA	12380.09	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-13.862;DP=637;FS=6.855;HRun=0;HaplotypeScore=100.8770;InbreedingCoeff=0.9902;MQ=88.51;MQ0=0;MQRankSum=-7.298;QD=51.80;ReadPosRankSum=4.820;VQSLOD=7.2042;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1701	0/0:6,0:6:18.06:0,18,292	0/0:20,0:20:51.09:0,51,768	0/0:29,0:29:78.25:0,78,1203	0/0:11,0:11:33.06:0,33,465	1/1:2,13:15:36.12:804,36,0	1/1:2,21:23:60.21:1336,60,0	0/0:27,0:27:66.23:0,66,1077	1/1:1,16:17:42.14:937,42,0	1/1:2,18:21:51.16:1082,51,0	1/1:3,15:19:33.11:731,33,0	1/1:3,28:32:75.26:1672,75,0	1/1:2,22:24:63.22:1404,63,0	1/1:2,26:29:78.27:1741,78,0	0/0:32,0:32:96.31:0,96,1543	0/0:26,0:26:72.25:0,72,1164	0/0:32,0:32:90.27:0,90,1420	0/0:27,0:27:75.26:0,75,1225	0/0:24,0:24:54.13:0,54,851	0/0:13,0:13:33.11:0,33,531	0/0:59,0:59:99:0,169,2728	1/1:1,11:12:9.03:200,9,0	1/1:0,18:18:42.62:934,43,0	1/1:0,28:29:69.24:1539,69,0	0/0:13,0:13:36.11:0,36,565	0/0:16,0:16:48.16:0,48,784	0/0:18,0:18:54.18:0,54,880	0/0:9,0:9:27.09:0,27,441
chr10	96144861	.	GA	G	1120.77	PASS	AB=0.929;AC=6;AF=0.107;AN=56;BaseQRankSum=7.199;DP=633;FS=5.081;HRun=11;HaplotypeScore=67.2840;InbreedingCoeff=0.5233;MQ=73.60;MQ0=0;MQRankSum=-0.297;QD=10.01;ReadPosRankSum=2.336;VQSLOD=2.9333;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,37:39:95.89:788,96,0	0/0:10,1:11:5.43:0,5,263	0/1:22,1:21:14.71:15,0,182	0/0:18,0:16:15.99:0,16,130	0/0:37,3:40:16.23:0,16,773	0/0:20,1:21:35.49:0,35,575	0/0:20,0:20:54.13:0,54,569	0/0:26,3:29:11.08:0,11,608	0/0:22,2:24:19.68:0,20,596	0/0:11,0:11:23.89:0,24,238	0/0:24,0:24:36.19:0,36,568	0/0:27,0:27:75.15:0,75,784	0/0:20,1:21:35.40:0,35,543	0/0:14,0:14:39.10:0,39,416	0/0:40,0:40:80.97:0,81,1019	1/1:1,22:23:53.92:443,54,0	0/0:21,0:21:57.13:0,57,595	0/0:15,2:17:1.84:0,2,431	0/0:23,0:24:56.98:0,57,590	0/0:20,0:22:47.11:0,47,520	0/0:21,0:21:51.13:0,51,544	0/0:25,0:26:69.04:0,69,718	0/0:21,0:21:48.11:0,48,504	0/0:16,2:18:1.87:0,2,428	0/0:18,0:18:45.11:0,45,480	0/0:25,0:25:66.16:0,66,696	0/1:23,3:27:4.83:5,0,545	0/0:8,0:8:21.05:0,21,224
chr10	96145282	.	T	TA	9448.43	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-16.286;DP=719;FS=1.659;HRun=3;HaplotypeScore=63.6222;InbreedingCoeff=0.9987;MQ=90.38;MQ0=0;MQRankSum=-7.746;QD=37.79;ReadPosRankSum=0.697;VQSLOD=5.2919;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,1259	1/1:1,13:14:39.13:546,39,0	0/0:26,0:26:71.94:0,72,817	0/0:29,0:29:77.66:0,78,879	1/1:4,21:25:63.21:879,63,0	0/0:22,0:21:66.17:0,66,767	0/0:16,0:16:42.10:0,42,480	0/0:38,0:37:99:0,99,1179	0/0:14,0:14:42.12:0,42,493	0/0:26,0:26:66.20:0,66,784	0/0:25,0:25:66.19:0,66,780	0/0:27,0:27:78.22:0,78,923	0/0:30,0:30:84.24:0,84,995	0/0:23,0:23:69:0,69,805	1/1:0,36:36:99:1470,105,0	0/0:38,0:38:99:0,111,1309	0/0:20,0:20:60.17:0,60,707	0/0:24,0:24:63.19:0,63,756	1/1:3,17:20:54.16:720,54,0	1/1:0,35:35:99:1377,105,0	1/1:1,28:29:75.25:1050,75,0	0/0:24,0:24:69.20:0,69,819	0/0:19,0:19:48.13:0,48,565	0/0:24,0:24:69.20:0,69,816	1/1:2,32:34:90.30:1260,90,0	1/1:1,28:29:51.29:1139,51,0	1/1:2,26:28:72.24:1008,72,0	0/0:6,0:6:18.06:0,18,216
chr10	96146055	.	A	AT	6035.75	PASS	AB=0.571;AC=29;AF=0.518;AN=56;BaseQRankSum=-10.582;DP=509;FS=3.253;HRun=10;HaplotypeScore=45.6188;InbreedingCoeff=0.9364;MQ=64.11;MQ0=3;MQRankSum=1.227;QD=23.13;ReadPosRankSum=0.227;VQSLOD=5.5424;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:31:63.02:643,63,0	0/0:6,0:6:14.98:0,15,123	0/0:12,0:7:14.11:0,14,90	0/0:11,0:8:11.88:0,12,89	0/0:30,0:30:71.82:0,72,582	1/1:4,14:18:47.71:488,48,0	0/1:3,9:12:0.55:200,0,1	1/1:7,35:41:86.41:1037,86,0	1/1:2,11:13:24.06:255,24,0	1/1:1,12:13:36.07:370,36,0	1/1:4,25:29:66.08:687,66,0	1/1:3,20:23:47.19:537,47,0	1/1:2,13:15:33.08:351,33,0	1/1:4,11:15:9.84:238,10,0	0/0:21,0:21:38.89:0,39,315	1/1:2,16:18:42.11:448,42,0	0/0:21,0:21:50.88:0,51,409	0/0:19,0:19:47.90:0,48,390	0/0:22,1:23:15.95:0,16,337	0/0:22,0:22:56.93:0,57,468	0/0:9,0:8:20.89:0,21,161	1/1:0,4:4:11.95:113,12,0	1/1:2,10:12:27.06:285,27,0	1/1:0,7:7:18.05:192,18,0	0/0:24,0:23:53.91:0,54,443	0/0:22,1:23:24.93:0,25,408	0/0:27,0:26:59.90:0,60,492	1/1:1,8:9:18.05:192,18,0
chr10	96146192	.	CGT	C	3462.49	PASS	AB=0.881;AC=24;AF=0.429;AN=56;BaseQRankSum=1.020;DP=599;FS=2.014;HRun=0;HaplotypeScore=157.7867;InbreedingCoeff=0.4624;MQ=64.16;MQ0=9;MQRankSum=-2.946;QD=13.42;ReadPosRankSum=-0.396;VQSLOD=3.3801;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:2.59:0,3,371	0/0:7,0:7:9:0,9,79	0/0:17,0:7:2.96:0,3,19	0/0:31,0:26:17.08:0,17,190	0/0:23,0:26:6.18:0,6,140	1/1:7,10:18:23.87:290,24,0	0/1:14,5:20:15.46:318,0,15	0/0:41,0:40:36.25:0,36,332	1/1:3,5:8:12.01:131,12,0	1/1:14,4:16:32.89:370,33,0	1/1:9,5:15:26.88:289,27,0	1/1:11,11:22:32.86:334,33,0	1/1:8,4:12:30.03:325,30,0	1/1:9,14:23:48.15:581,48,0	0/1:13,0:14:14.40:14,0,94	0/0:17,0:17:4.19:0,4,225	0/0:46,1:47:78.81:0,79,1609	0/0:30,0:29:51.22:0,51,1085	0/1:17,0:18:21.61:22,0,128	0/0:19,0:21:0.19:0,0,88	0/0:32,0:35:29.95:0,30,306	0/1:2,6:9:0:0,0,0	1/1:5,7:12:20.72:252,21,0	1/1:12,11:22:42.13:507,42,0	0/1:23,0:24:19.39:19,0,56	0/1:15,1:18:10.32:10,0,272	0/0:11,0:18:4.62:0,5,169	0/0:13,0:13:5.72:0,6,266
chr10	96146202	.	TGTGTGTGTGC	T	2456.41	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=3.999;DP=591;FS=0.484;HRun=0;HaplotypeScore=228.9644;InbreedingCoeff=0.1063;MQ=54.12;MQ0=15;MQRankSum=-2.638;QD=10.11;ReadPosRankSum=-1.680;VQSLOD=1.6703;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:99:147,0,159	0/0:6,0:6:5.67:0,6,30	0/0:13,0:3:3.01:0,3,38	0/0:23,0:18:43.39:0,43,435	0/1:27,0:27:1.59:2,0,176	0/0:18,0:18:27.56:0,28,689	0/0:22,0:22:40.18:0,40,795	1/1:4,28:30:80.92:1096,81,0	0/0:9,0:9:15.03:0,15,230	0/0:19,0:16:35.99:0,36,635	0/0:12,0:12:30.07:0,30,478	0/0:24,0:23:45.07:0,45,651	0/0:13,0:13:32.97:0,33,614	0/0:23,0:23:53.71:0,54,1013	0/1:14,0:14:38.33:98,0,38	0/1:19,0:19:99:166,0,122	0/0:52,0:52:99:0,141,4171	0/0:31,0:30:84.84:0,85,3183	0/1:21,0:19:99:108,0,204	0/1:21,0:21:14.44:14,0,105	0/0:41,0:37:16.52:0,17,165	1/1:8,0:8:0.47:2,0,0	0/0:13,0:13:23.57:0,24,414	0/0:29,0:27:51.31:0,51,919	0/1:20,0:20:63.56:64,0,94	0/1:18,0:15:72.52:73,0,225	0/1:17,0:17:36.87:37,0,110	1/1:10,2:12:36.08:811,36,0
chr10	96146206	.	TGTGTGCGC	T	2636.28	PASS	AB=0.821;AC=20;AF=0.357;AN=56;BaseQRankSum=3.748;DP=578;FS=4.092;HRun=0;HaplotypeScore=210.6560;InbreedingCoeff=0.1369;MQ=53.30;MQ0=17;MQRankSum=-3.073;QD=9.32;ReadPosRankSum=0.725;VQSLOD=2.1788;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:99:305,0,107	1/1:0,6:6:8.51:44,9,0	0/0:10,0:1:3.01:0,3,32	0/1:20,0:15:16.96:17,0,67	0/1:9,15:24:65.34:106,0,65	0/0:19,0:19:29.46:0,29,404	0/0:21,0:21:5.33:0,5,547	0/0:30,0:28:2.91:0,3,115	0/0:10,0:10:14.91:0,15,197	0/0:17,0:15:34.39:0,34,431	0/0:11,0:11:23.92:0,24,275	0/0:25,0:24:41.59:0,42,508	0/1:13,0:13:15.23:15,0,331	0/0:23,0:23:51.86:0,52,606	0/1:4,10:14:3.41:300,0,3	0/1:17,0:17:90.17:117,0,90	0/0:54,0:54:99:0,138,3753	0/0:31,0:30:83.70:0,84,2786	0/1:13,7:18:86.32:466,0,86	0/1:7,13:20:72.57:78,0,73	0/1:40,0:35:66.56:215,0,67	1/1:8,0:8:0.47:2,0,0	0/0:15,0:15:28.81:0,29,372	0/0:28,0:26:44.51:0,45,599	1/1:3,15:18:11.07:252,11,0	0/1:10,10:16:99:442,0,133	1/1:8,9:17:22.28:264,22,0	1/1:11,0:11:25.71:187,26,0
chr10	96146224	.	CGTGT	C	3221.30	PASS	AB=0.969;AC=36;AF=0.692;AN=52;BaseQRankSum=5.334;DP=578;FS=17.688;HRun=0;HaplotypeScore=178.3426;InbreedingCoeff=0.2855;MQ=50.53;MQ0=16;MQRankSum=-3.484;QD=7.06;ReadPosRankSum=3.202;VQSLOD=1.6826;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:36:19.24:19,0,244	0/0:7,0:7:3.01:0,3,46	./.	./.	0/1:25,0:25:4.05:4,0,37	1/1:9,11:23:14.85:355,15,0	1/1:10,5:15:18.64:277,19,0	0/0:34,0:32:15.91:0,16,108	1/1:1,12:13:15.05:246,15,0	1/1:9,14:21:38.29:465,38,0	1/1:5,4:9:6.02:90,6,0	1/1:11,22:32:23.87:384,24,0	1/1:4,8:12:17.98:262,18,0	1/1:10,14:26:33.09:505,33,0	0/1:14,0:14:35.43:35,0,71	1/1:19,0:19:9.01:83,9,0	0/0:40,0:46:43.82:0,44,1693	0/0:27,0:29:61.41:0,61,1061	0/1:17,0:15:30.07:30,0,79	0/1:18,0:20:2.09:2,0,23	1/1:19,0:42:0.47:1,0,0	1/1:5,3:8:6.12:58,6,0	1/1:2,9:11:15.05:236,15,0	1/1:17,14:31:17.68:226,18,0	0/1:21,0:21:7.85:8,0,131	0/1:19,0:15:35.81:42,0,36	0/1:18,0:18:5.80:6,0,98	1/1:9,0:9:6.01:56,6,0
chr10	96146232	.	T	TGC	258.19	PASS	AB=0.919;AC=4;AF=0.077;AN=52;BaseQRankSum=0.301;DP=557;FS=6.646;HRun=0;HaplotypeScore=177.5737;InbreedingCoeff=0.2580;MQ=50.42;MQ0=13;MQRankSum=-0.116;QD=3.40;ReadPosRankSum=-2.939;VQSLOD=1.8812;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:40:22.73:23,0,128	0/0:5,0:5:5.63:0,6,30	./.	./.	0/0:19,0:19:5.58:0,6,39	0/0:24,0:24:38.71:0,39,282	0/0:17,0:17:35.82:0,36,287	0/1:25,6:29:89.09:312,0,89	0/0:15,0:15:26.76:0,27,191	0/0:25,0:23:51.86:0,52,405	0/0:7,0:7:8.97:0,9,79	0/0:34,0:33:44.45:0,44,331	0/0:13,0:12:26.77:0,27,199	0/0:24,0:24:50.61:0,51,372	0/0:14,0:13:23.60:0,24,163	0/0:19,0:19:8.73:0,9,49	0/0:43,0:43:99:0,105,1322	0/0:29,0:29:78.03:0,78,924	0/0:19,0:17:41.52:0,42,299	0/0:20,0:20:14.25:0,14,83	0/0:45,0:39:7.58:0,8,63	0/0:9,0:9:4.87:0,5,45	0/0:11,0:11:18.34:0,18,140	0/0:31,0:30:29.56:0,30,251	0/0:18,0:18:23.09:0,23,139	0/0:21,0:17:36.65:0,37,225	0/0:18,0:18:32.30:0,32,214	1/1:5,0:5:6.27:27,6,0
chr10	96150476	.	C	CGGAA	9275.48	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-13.289;DP=740;FS=7.427;HRun=0;HaplotypeScore=145.7905;InbreedingCoeff=0.9774;MQ=66.10;MQ0=4;MQRankSum=1.286;QD=32.78;ReadPosRankSum=-2.308;VQSLOD=4.2179;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:50:90.62:0,91,1633	1/1:5,8:14:18.06:437,18,0	0/0:33,0:23:6.50:0,6,304	0/0:36,0:32:33.27:0,33,403	1/1:8,23:32:63.15:1339,63,0	0/0:30,0:30:69.21:0,69,1072	0/0:29,0:29:69.21:0,69,1072	1/1:22,0:20:20.08:248,20,0	0/0:24,0:24:60.19:0,60,938	0/0:22,0:22:48.16:0,48,757	0/0:11,0:11:24.08:0,24,368	0/0:28,0:28:66.21:0,66,1043	0/0:12,0:12:27.09:0,27,428	0/0:22,0:22:36.11:0,36,558	1/1:8,28:36:36.09:874,36,0	0/0:33,0:33:72.20:0,72,1080	0/0:37,0:37:87.18:0,87,1304	0/0:26,0:26:45.15:0,45,724	1/1:16,8:24:27.09:549,27,0	1/1:2,14:18:41.75:654,42,0	1/1:12,30:43:72.25:1712,72,0	0/0:10,0:10:15.03:0,15,198	0/0:26,0:27:35.26:0,35,805	0/0:26,0:26:45.13:0,45,697	1/1:2,19:21:30.06:675,30,0	1/1:6,22:29:69.21:1505,69,0	1/1:10,20:32:45.15:1091,45,0	1/1:12,0:12:12.51:192,13,0
chr10	96153460	.	C	CA	11232.64	PASS	AB=0.581;AC=46;AF=0.821;AN=56;BaseQRankSum=-9.528;DP=548;FS=4.774;HRun=9;HaplotypeScore=55.0183;InbreedingCoeff=0.7447;MQ=65.76;MQ0=2;MQRankSum=-1.201;QD=24.00;ReadPosRankSum=0.379;VQSLOD=5.6879;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:24:51.14:561,51,0	1/1:0,5:5:15.04:166,15,0	0/0:10,0:8:17.98:0,18,156	0/0:16,0:12:32.88:0,33,274	1/1:1,13:15:15.85:373,16,0	1/1:2,16:18:42.11:462,42,0	1/1:3,14:17:42.11:465,42,0	1/1:10,22:32:43.14:701,43,0	1/1:3,13:16:30.08:332,30,0	1/1:8,20:28:60.13:641,60,0	1/1:3,13:16:33.09:365,33,0	1/1:2,21:23:57.02:630,57,0	1/1:3,17:20:16.06:406,16,0	1/1:4,20:24:34.11:605,34,0	0/1:4,16:20:27.03:414,0,27	1/1:4,22:26:63.17:697,63,0	0/0:27,0:28:62:0,62,527	0/0:26,0:26:53.97:0,54,469	1/1:5,16:20:51.14:564,51,0	0/1:6,11:17:15.94:283,0,16	1/1:3,10:13:27.07:299,27,0	1/1:5,9:14:15.04:166,15,0	1/1:3,17:20:42.11:457,42,0	1/1:6,7:13:24.06:265,24,0	1/1:1,20:21:51.14:564,51,0	1/1:0,22:22:63.16:688,63,0	1/1:2,30:32:74.99:830,75,0	1/1:1,10:10:27.07:299,27,0
chr10	96153717	.	AT	A	1915.86	PASS	AB=0.899;AC=24;AF=0.429;AN=56;BaseQRankSum=1.798;DP=438;FS=0.439;HRun=13;HaplotypeScore=57.4171;InbreedingCoeff=0.7915;MQ=72.58;MQ0=1;MQRankSum=0.135;QD=11.01;ReadPosRankSum=2.391;VQSLOD=3.2060;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:15:32.87:0,33,295	0/0:4,0:4:6.01:0,6,58	0/0:34,0:18:15.43:0,15,125	0/0:22,0:12:8.36:0,8,82	0/1:18,2:19:26.40:26,0,243	1/1:0,14:14:29.83:219,30,0	1/1:4,10:14:29.82:219,30,0	0/0:32,1:35:61.20:0,61,696	1/1:1,12:14:35.79:263,36,0	1/1:4,12:17:10.78:223,11,0	1/1:3,16:19:40.73:286,41,0	1/1:2,8:11:22.91:159,23,0	1/1:4,8:12:18.77:134,19,0	1/1:2,10:12:26.84:197,27,0	0/0:13,1:14:24.03:0,24,228	0/0:16,0:16:39:0,39,363	0/0:13,0:14:35.89:0,36,335	0/0:20,0:22:41:0,41,398	0/1:14,2:16:12.23:12,0,201	0/0:17,1:18:14.13:0,14,291	0/0:2,0:2:3:0,3,29	1/1:2,4:6:11.92:88,12,0	1/1:4,9:13:26.80:197,27,0	1/1:0,6:6:14.91:109,15,0	0/0:14,0:14:26.91:0,27,244	0/0:13,0:13:24.02:0,24,227	0/0:23,1:24:32.15:0,32,462	0/0:17,0:17:42.03:0,42,396
chr10	96154743	.	GA	G	1237.35	PASS	AB=0.814;AC=24;AF=0.429;AN=56;BaseQRankSum=3.287;DP=434;FS=3.469;HRun=15;HaplotypeScore=78.1485;InbreedingCoeff=0.3312;MQ=55.40;MQ0=22;MQRankSum=-0.867;QD=5.33;ReadPosRankSum=-0.344;VQSLOD=2.5515;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:27:50.83:0,51,436	0/0:7,0:6:14.97:0,15,126	0/1:28,0:8:12.87:13,0,50	0/1:24,0:9:16.26:16,0,42	0/0:9,2:12:7.62:0,8,179	1/1:4,11:15:28.61:179,29,0	1/1:4,6:11:19.77:121,20,0	0/1:10,2:11:17.54:18,0,108	0/1:3,5:7:11.51:62,0,12	0/1:11,9:17:6.15:136,0,6	0/1:11,7:18:29.42:29,0,113	1/1:4,2:5:5.89:37,6,0	1/1:1,6:7:11.72:73,12,0	1/1:3,10:13:29.54:192,30,0	0/0:13,0:15:29.76:0,30,238	0/0:13,1:15:10.58:0,11,206	0/0:31,0:30:74.98:0,75,658	0/0:19,0:19:41.95:0,42,362	0/0:15,2:18:12.12:0,12,317	0/0:7,0:9:4.53:0,5,134	0/1:5,1:4:3.04:14,0,3	1/1:3,5:7:14.73:96,15,0	1/1:5,10:13:2.37:137,2,0	1/1:9,13:21:31.83:241,32,0	0/0:9,0:9:20.76:0,21,159	0/1:11,5:16:60.52:61,0,130	0/0:18,3:22:1.13:0,1,302	0/0:13,1:12:4.56:0,5,148
chr10	96156734	.	TC	T	4617.20	PASS	AB=0.952;AC=50;AF=0.893;AN=56;BaseQRankSum=-4.480;DP=386;FS=1.221;HRun=1;HaplotypeScore=60.0192;InbreedingCoeff=0.1395;MQ=54.66;MQ0=3;MQRankSum=-0.272;QD=12.55;ReadPosRankSum=-0.280;VQSLOD=3.1909;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:18:6.58:34,7,0	1/1:6,1:7:5.75:100,6,0	0/1:19,1:10:14.24:14,0,83	0/0:18,0:7:3.90:0,4,99	1/1:18,1:19:26.06:282,26,0	1/1:13,0:13:37.10:261,37,0	1/1:11,1:12:23.24:138,23,0	1/1:4,22:26:34.82:370,35,0	1/1:9,0:9:22.03:153,22,0	1/1:15,0:14:41.33:306,41,0	1/1:7,0:6:16.38:105,16,0	1/1:9,0:9:22.85:158,23,0	1/1:8,0:8:15.64:127,16,0	1/1:12,0:11:28.52:175,29,0	1/1:16,3:19:32.54:375,33,0	1/1:15,0:15:26.45:288,26,0	0/1:22,0:22:20.01:20,0,273	0/1:19,0:19:11.22:11,0,188	1/1:16,1:16:33.20:336,33,0	1/1:10,0:10:20.33:182,20,0	0/1:5,1:6:8.87:57,0,9	1/1:3,0:3:5.93:40,6,0	1/1:0,7:7:3.37:17,3,0	1/1:6,1:7:10.99:68,11,0	1/1:15,2:17:15.67:282,16,0	1/1:13,0:13:14.53:147,15,0	1/1:19,2:19:20.94:281,21,0	1/1:17,0:17:41.08:292,41,0
chr10	96156999	.	GAAGATT	G	18964.96	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=8.369;DP=443;FS=0.000;HRun=0;HaplotypeScore=122.6474;InbreedingCoeff=0.8855;MQ=86.71;MQ0=0;MQRankSum=-11.673;QD=53.42;ReadPosRankSum=4.078;VQSLOD=4.7697;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,5:7:12.04:271,12,0	1/1:0,9:9:27.09:573,27,0	0/0:24,0:24:59.90:0,60,1908	0/0:19,0:19:44.82:0,45,1405	1/1:2,21:23:51.17:1116,51,0	1/1:1,20:21:57.20:1275,57,0	1/1:2,3:5:3.01:38,3,0	1/1:3,16:19:48.16:1033,48,0	1/1:2,5:7:12.04:271,12,0	1/1:4,20:24:60.21:1356,60,0	1/1:0,10:10:21.07:411,21,0	1/1:2,9:11:21.07:475,21,0	1/1:0,12:12:33.11:746,33,0	1/1:4,19:23:51.17:1121,51,0	1/1:0,30:30:87.30:1955,87,0	1/1:3,13:16:39.13:870,39,0	0/0:29,0:29:75.24:0,75,2402	0/0:16,0:16:39.13:0,39,1270	1/1:3,10:13:30.10:620,30,0	1/1:2,15:17:45.15:926,45,0	1/1:1,9:10:21.07:322,21,0	1/1:0,5:5:15.05:335,15,0	1/1:2,14:16:36.59:781,37,0	1/1:1,2:3:3.01:38,3,0	1/1:1,7:8:21.07:445,21,0	1/1:2,24:26:72.25:1628,72,0	1/1:3,29:31:81.28:1816,81,0	1/1:0,8:8:24.08:543,24,0
chr10	96158983	.	GGAAGGGGCTGGCGAGATCACTTATAGT	G	5282.45	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.765;DP=644;FS=1.569;HRun=0;HaplotypeScore=434.8550;InbreedingCoeff=0.9982;MQ=88.28;MQ0=0;MQRankSum=-8.728;QD=91.08;ReadPosRankSum=2.750;VQSLOD=3.1724;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:42.14:2694,42,0	0/0:11,0:11:33.11:0,33,3610	0/0:26,0:26:72.15:0,72,3358	0/0:23,0:23:54.17:0,54,4297	0/0:21,0:21:51.16:0,51,3001	0/0:21,0:21:51.18:0,51,5483	0/0:33,0:33:84.28:0,84,7538	0/0:26,0:26:69.22:0,69,4573	0/0:23,0:23:69.20:0,69,5619	0/0:22,0:22:56.22:0,56,4484	0/0:19,0:19:45.15:0,45,3582	0/0:9,0:9:27.09:0,27,2972	0/0:20,0:20:57.18:0,57,5695	0/0:16,0:16:45.15:0,45,4039	0/0:36,0:36:96.31:0,96,9430	1/1:1,26:27:36.12:2589,36,0	0/0:28,0:28:75.26:0,75,7146	0/0:26,0:26:72.23:0,72,7586	0/0:16,0:16:45.15:0,45,3478	0/0:20,0:20:60.21:0,60,4423	0/0:45,0:45:99:0,126,12634	0/0:20,0:20:57.18:0,57,4547	0/0:15,0:15:39.13:0,39,2831	0/0:33,0:33:90.30:0,90,9177	0/0:27,0:27:75.25:0,75,5138	0/0:22,0:22:63.22:0,63,5420	0/0:20,0:20:57.20:0,57,5799	0/0:8,0:8:24.08:0,24,2720
chr10	96159553	.	TTA	T	663.45	PASS	AB=0.957;AC=18;AF=0.333;AN=54;BaseQRankSum=3.766;DP=328;FS=12.046;HRun=0;HaplotypeScore=43.9258;InbreedingCoeff=0.4363;MQ=41.21;MQ0=28;MQRankSum=0.086;QD=5.72;ReadPosRankSum=-0.718;VQSLOD=0.4534;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:17.37:0,17,96	0/0:8,0:8:24:0,24,281	0/0:8,0:3:2.92:0,3,18	0/0:8,0:4:8.99:0,9,81	0/0:16,0:15:44.71:0,45,483	0/1:17,2:19:31.79:131,0,32	1/1:4,1:4:5.51:51,6,0	0/0:22,0:19:13.88:0,14,175	0/1:7,0:7:12.59:22,0,13	0/1:24,1:24:11.18:215,0,11	1/1:7,3:10:12.93:102,13,0	0/1:8,0:6:6.95:7,0,16	0/1:6,1:6:0.64:70,0,1	1/1:10,1:10:12.77:142,13,0	0/0:11,0:11:21.07:0,21,275	0/0:6,0:5:14.07:0,14,85	0/0:20,0:15:38.27:0,38,381	0/0:18,0:10:20.98:0,21,272	0/0:21,0:19:43.51:0,44,564	0/0:8,0:8:23.82:0,24,234	./.	1/1:4,0:4:8.54:43,9,0	1/1:5,0:4:0.97:10,1,0	1/1:4,1:4:5.85:34,6,0	0/0:9,0:9:20.96:0,21,257	0/0:22,0:21:61.14:0,61,683	0/0:18,0:17:36.01:0,36,428	0/1:10,0:4:7.50:7,0,29
chr10	96159554	.	TA	T	1204.85	PASS	AC=22;AF=0.423;AN=52;BaseQRankSum=1.360;DP=314;FS=3.293;HRun=3;HaplotypeScore=36.2046;InbreedingCoeff=0.8614;MQ=40.70;MQ0=30;MQRankSum=0.576;QD=12.05;ReadPosRankSum=-0.332;VQSLOD=1.6169;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:37.73:0,38,226	0/0:8,0:8:23.92:0,24,200	./.	0/0:7,0:3:5.83:0,6,34	0/0:16,0:15:38.55:0,39,318	1/1:11,7:18:31.47:302,31,0	1/1:4,1:4:8.80:54,9,0	0/0:23,0:20:43.92:0,44,289	1/1:1,6:7:5.94:53,6,0	1/1:17,5:21:44.46:364,44,0	1/1:8,1:9:20.62:131,21,0	1/1:3,5:6:5.88:53,6,0	1/1:5,2:6:14.66:109,15,0	1/1:9,2:10:26.42:181,26,0	0/0:11,0:11:20.90:0,21,179	0/0:6,0:5:14.65:0,15,91	0/0:20,0:14:35.09:0,35,242	0/0:19,0:10:20.76:0,21,196	0/0:19,0:17:47.71:0,48,418	0/0:8,0:8:23.39:0,23,178	./.	1/1:0,4:4:8.96:89,9,0	1/1:2,2:3:3.01:35,3,0	1/1:4,1:4:5.36:33,5,0	0/0:7,0:7:17.95:0,18,161	0/0:19,0:18:51.64:0,52,435	0/0:16,0:15:35.90:0,36,310	0/0:10,0:4:5.50:0,5,37
chr10	96161759	.	ATT	A	2913.95	PASS	AB=0.577;AC=32;AF=0.571;AN=56;BaseQRankSum=-2.754;DP=361;FS=5.466;HRun=14;HaplotypeScore=63.5081;InbreedingCoeff=0.6737;MQ=70.18;MQ0=5;MQRankSum=-1.142;QD=13.31;ReadPosRankSum=1.232;VQSLOD=2.5503;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,10:15:26.73:234,27,0	0/0:1,0:2:2.50:0,2,9	0/0:13,0:8:9:0,9,92	0/0:12,0:9:14.71:0,15,154	0/0:1,1:15:5.43:0,5,79	1/1:1,14:15:36.03:333,36,0	1/1:1,6:7:15.01:139,15,0	1/1:4,23:28:55.09:549,55,0	1/1:1,3:4:9:83,9,0	1/1:4,14:19:38.69:345,39,0	1/1:1,9:12:0.42:97,0,0	1/1:4,7:11:14.92:139,15,0	1/1:3,3:5:8.99:83,9,0	1/1:7,10:17:23.97:222,24,0	0/0:3,0:12:19.96:0,20,69	1/1:1,8:10:20.73:178,21,0	0/0:20,0:22:48.09:0,48,548	0/0:19,0:18:47.59:0,48,585	0/1:6,3:19:46.93:47,0,91	0/0:4,0:13:21.23:0,21,119	0/0:2,0:10:15.73:0,16,54	1/1:1,2:3:3:28,3,0	1/1:2,5:9:20.50:163,21,0	1/1:7,3:10:8.96:83,9,0	0/0:4,0:11:22.46:0,22,78	0/1:3,1:13:31.40:31,0,51	0/0:0,1:12:0.19:0,0,59	1/1:3,15:16:39.03:361,39,0
chr10	96161777	.	G	GATTT	947.10	PASS	AC=4;AF=0.087;AN=46;BaseQRankSum=-4.068;DP=332;FS=0.000;HRun=0;HaplotypeScore=80.1540;InbreedingCoeff=0.6080;MQ=48.83;MQ0=29;MQRankSum=-4.872;QD=17.54;ReadPosRankSum=-2.698;VQSLOD=2.6952;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:11:21.07:0,21,336	./.	./.	./.	0/0:16,0:16:21.07:0,21,349	0/0:20,0:20:51.17:0,51,843	0/0:5,0:4:3.01:0,3,50	1/1:30,7:32:36.11:835,36,0	0/0:5,0:5:6.02:0,6,100	0/0:13,0:12:21.07:0,21,350	0/0:10,0:9:3.01:0,3,50	0/0:8,0:7:9.02:0,9,125	0/0:8,0:6:3:0,3,25	0/0:9,0:9:9.03:0,9,150	0/0:13,0:13:27.09:0,27,443	0/0:10,0:10:11.99:0,12,200	0/0:24,0:19:33.11:0,33,525	0/0:20,0:15:33.11:0,33,549	0/0:24,0:20:27.06:0,27,416	0/0:11,0:11:9.03:0,9,149	./.	./.	0/0:8,0:8:15.05:0,15,235	0/0:5,0:5:5.99:0,6,99	0/0:10,0:10:24.08:0,24,400	0/0:13,0:11:24.04:0,24,369	0/0:12,0:12:27.09:0,27,449	1/1:13,3:12:9.03:221,9,0
chr10	96161920	.	CG	C	92.08	PASS	AC=2;AF=0.040;AN=50;BaseQRankSum=3.230;DP=339;FS=4.675;HRun=3;HaplotypeScore=49.9945;InbreedingCoeff=0.6554;MQ=38.83;MQ0=69;MQRankSum=-2.839;QD=6.14;ReadPosRankSum=-1.547;VQSLOD=-0.0528;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:20:8:0,8,566	0/0:4,0:4:12.04:0,12,172	./.	./.	0/0:21,0:19:42.14:0,42,602	0/0:21,0:17:36.12:0,36,517	0/0:15,0:11:24.08:0,24,344	1/1:10,5:5:15.05:180,15,0	0/0:12,0:11:27.09:0,27,387	0/0:13,0:12:27.09:0,27,383	0/0:9,0:8:18.06:0,18,257	0/0:6,0:6:18.06:0,18,237	0/0:7,0:6:18.04:0,18,239	0/0:6,0:6:12.04:0,12,173	0/0:10,0:10:21.07:0,21,301	0/0:12,0:12:26.79:0,27,364	0/0:27,0:22:51.03:0,51,686	0/0:24,0:16:36.04:0,36,494	0/0:19,0:16:42.13:0,42,582	0/0:6,0:4:9.03:0,9,129	0/0:25,0:10:24.08:0,24,345	0/0:3,0:3:6.02:0,6,86	0/0:5,0:4:6.02:0,6,86	0/0:13,0:11:21.07:0,21,301	0/0:9,0:6:12:0,12,149	0/0:14,0:11:30.10:0,30,430	0/0:15,0:14:36.12:0,36,516	./.
chr10	96163556	.	T	TCAAA	7455.04	PASS	AB=0.700;AC=21;AF=0.375;AN=56;BaseQRankSum=-10.379;DP=652;FS=1.901;HRun=0;HaplotypeScore=109.3400;InbreedingCoeff=0.8801;MQ=59.19;MQ0=5;MQRankSum=0.198;QD=31.06;ReadPosRankSum=-0.948;VQSLOD=4.8329;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:43:69.08:0,69,643	1/1:4,7:11:21.07:499,21,0	0/0:24,0:15:11.91:0,12,107	0/0:17,0:13:9.03:0,9,136	1/1:11,18:30:66.22:1395,66,0	0/0:27,0:26:60.20:0,60,942	0/0:19,0:20:27.07:0,27,384	1/1:46,0:46:33.56:562,34,0	0/0:23,0:23:48.15:0,48,733	0/0:28,0:28:48.16:0,48,748	0/0:26,0:26:45.14:0,45,686	0/0:16,0:16:30.10:0,30,472	0/0:10,0:10:15.05:0,15,232	0/0:13,0:13:24.08:0,24,378	1/1:7,15:24:39.13:914,39,0	0/0:7,0:28:57.06:0,57,528	0/0:35,0:35:69.17:0,69,1010	0/0:42,0:42:66.09:0,66,1039	1/1:13,6:19:18.06:404,18,0	1/1:12,16:29:48.16:1094,48,0	1/1:7,10:18:21.07:499,21,0	0/0:13,0:13:27.06:0,27,375	0/0:14,0:14:30.10:0,30,469	0/0:32,0:33:57.07:0,57,773	1/1:3,9:12:27.09:642,27,0	0/1:12,9:21:20.17:540,0,20	1/1:8,15:26:36.12:855,36,0	1/1:1,0:4:3.01:52,3,0
chr10	96163811	.	AGTTT	A	9281.71	PASS	AB=0.550;AC=17;AF=0.304;AN=56;BaseQRankSum=14.097;DP=635;FS=6.316;HRun=0;HaplotypeScore=109.7313;InbreedingCoeff=0.9157;MQ=88.48;MQ0=1;MQRankSum=-3.464;QD=47.36;ReadPosRankSum=3.687;VQSLOD=5.6959;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.32:0,93,2511	1/1:1,11:12:27.09:513,27,0	0/0:21,0:21:54.17:0,54,1363	0/0:28,0:28:77.16:0,77,1927	1/1:3,18:21:48.12:874,48,0	0/0:23,0:23:69.24:0,69,1832	0/0:21,0:21:63.22:0,63,1701	0/0:30,0:30:84.28:0,84,2154	0/0:19,0:19:51.17:0,51,1292	0/0:26,0:26:72.25:0,72,1944	0/0:19,0:19:54.19:0,54,1453	0/0:20,0:20:60.21:0,60,1618	0/0:22,0:22:63.22:0,63,1696	0/0:29,0:29:78.27:0,78,2094	1/1:1,28:29:78.27:1479,78,0	0/0:28,0:28:78.27:0,78,2078	0/0:22,0:22:66.23:0,66,1775	0/0:24,0:24:69.22:0,69,1799	1/1:3,13:16:42.14:797,42,0	1/1:1,18:19:48.16:910,48,0	1/1:2,26:28:72.25:1367,72,0	0/0:14,0:14:42.13:0,42,1077	0/0:12,0:12:36.12:0,36,966	0/0:28,0:28:84.29:0,84,2232	1/1:1,16:17:45.15:854,45,0	0/1:4,18:22:23.87:894,0,24	1/1:1,31:31:84.29:1595,84,0	0/0:22,0:22:63.20:0,63,1645
chr10	96166889	.	TC	T	4763.32	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.085;DP=765;FS=0.000;HRun=1;HaplotypeScore=73.1915;InbreedingCoeff=0.9999;MQ=84.84;MQ0=0;MQRankSum=-1.662;QD=39.69;ReadPosRankSum=0.595;VQSLOD=5.3061;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:99:1468,105,0	0/0:14,0:14:39.13:0,39,623	0/0:28,0:28:81.27:0,81,1279	0/0:19,0:20:46.75:0,47,803	0/0:24,0:24:72.21:0,72,1104	0/0:20,0:20:60.19:0,60,934	0/0:42,0:42:99:0,126,1919	1/1:0,30:30:90.29:1240,90,0	0/0:23,0:23:69.24:0,69,1101	0/0:24,0:24:72.25:0,72,1152	0/0:21,0:21:60.20:0,60,945	0/0:32,0:32:96.33:0,96,1523	0/0:31,0:31:93.29:0,93,1441	0/0:38,0:38:99:0,111,1752	0/0:28,0:28:84.27:0,84,1320	1/1:0,41:41:99:1594,114,0	0/0:31,0:31:93.30:0,93,1464	0/0:18,0:18:54.16:0,54,838	0/0:25,0:25:75.26:0,75,1198	0/0:17,0:17:51.16:0,51,789	0/0:73,0:73:99:0,217,3379	0/0:21,0:21:63.21:0,63,1005	0/0:17,0:17:48.15:0,48,744	0/0:27,0:27:81.28:0,81,1292	0/0:15,0:15:42.14:0,42,671	0/0:33,0:33:99:0,99,1541	0/0:23,0:23:66.21:0,66,1031	1/1:0,11:11:33.11:462,33,0
chr10	96166982	.	A	AGT	7881.79	PASS	AB=0.663;AC=18;AF=0.321;AN=56;BaseQRankSum=-7.653;DP=791;FS=9.924;HRun=0;HaplotypeScore=108.0782;InbreedingCoeff=0.6198;MQ=68.24;MQ0=4;MQRankSum=-1.152;QD=23.81;ReadPosRankSum=0.022;VQSLOD=4.8432;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:31:50.96:467,51,0	0/1:7,3:11:55.62:127,0,56	0/0:24,0:18:3.09:0,3,156	0/0:32,0:24:4.12:0,4,128	0/1:11,12:24:60.83:502,0,61	0/0:14,0:16:35.94:0,36,403	0/0:37,0:37:69.13:0,69,774	0/0:33,0:33:48.13:0,48,549	0/0:22,0:23:57:0,57,650	0/0:25,0:26:47.23:0,47,526	0/0:16,0:16:36.11:0,36,424	0/0:40,0:40:96.12:0,96,1110	0/0:32,0:33:75.04:0,75,851	0/0:24,1:25:15.85:0,16,659	1/1:6,33:39:83.90:1326,84,0	1/1:17,3:43:93.07:974,93,0	0/0:38,0:40:89.91:0,90,1005	0/0:21,0:22:47.91:0,48,515	0/1:10,10:20:2.26:416,0,2	1/1:6,27:36:42.92:1148,43,0	1/1:14,37:51:39.90:1101,40,0	0/0:23,0:23:60.18:0,60,706	0/0:23,0:23:56.79:0,57,628	0/0:29,0:29:35.20:0,35,647	1/1:12,11:25:0.78:486,1,0	0/1:8,19:29:29.72:814,0,30	1/1:5,16:22:33.11:521,33,0	0/0:15,0:17:41.79:0,42,452
chr10	96168874	.	C	CT	7784.03	PASS	AB=0.549;AC=29;AF=0.518;AN=56;BaseQRankSum=-16.109;DP=612;FS=14.183;HRun=10;HaplotypeScore=80.5388;InbreedingCoeff=0.9083;MQ=67.36;MQ0=1;MQRankSum=-0.891;QD=23.59;ReadPosRankSum=-0.313;VQSLOD=4.0813;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,25:31:47.54:711,48,0	0/0:2,0:12:20.37:0,20,59	0/0:13,0:12:13.84:0,14,119	0/0:14,0:13:2.81:0,3,104	0/0:1,0:29:55:0,55,159	1/1:2,15:17:39.10:416,39,0	1/1:3,8:11:24.06:256,24,0	1/1:10,22:32:40.91:639,41,0	1/1:2,9:11:24.06:256,24,0	1/1:7,20:27:63.14:656,63,0	1/1:5,28:33:56.57:807,57,0	1/1:3,18:21:51.13:544,51,0	1/1:2,21:23:57.01:605,57,0	1/1:3,17:20:54.03:549,54,0	0/0:1,0:21:34.63:0,35,100	1/1:4,19:23:26.48:486,26,0	0/0:38,0:38:99:0,108,879	0/0:19,0:19:41.94:0,42,345	0/0:3,0:23:40.11:0,40,124	0/0:1,0:29:57.04:0,57,165	0/0:0,0:9:18.33:0,18,53	1/1:3,22:25:59.93:605,60,0	0/1:5,23:28:4.72:570,0,5	1/1:0,4:4:9.02:96,9,0	0/0:0,0:33:61.11:0,61,177	0/0:3,0:24:41.92:0,42,125	0/0:6,0:18:24.43:0,24,71	1/1:3,19:23:56.98:590,57,0
chr10	96170150	.	TG	T	14181.99	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=17.627;DP=669;FS=0.910;HRun=1;HaplotypeScore=88.1460;InbreedingCoeff=0.9994;MQ=83.72;MQ0=0;MQRankSum=-2.049;QD=38.85;ReadPosRankSum=3.268;VQSLOD=5.3997;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:99:1425,102,0	0/0:19,0:19:57.18:0,57,883	0/0:19,0:19:51.17:0,51,795	0/0:19,0:19:55.74:0,56,852	0/0:16,0:16:45.13:0,45,691	1/1:1,19:20:51.17:709,51,0	1/1:0,21:21:57.19:797,57,0	1/1:0,19:19:57.16:777,57,0	1/1:0,27:27:81.27:1133,81,0	1/1:0,22:22:66.19:888,66,0	1/1:0,13:13:33.11:461,33,0	1/1:0,29:29:81.27:1133,81,0	1/1:0,27:27:81.27:1133,81,0	1/1:1,34:35:99:1366,99,0	0/0:32,0:32:96.33:0,96,1534	1/1:0,25:25:72.24:1007,72,0	0/0:43,0:43:99:0,126,1988	0/0:27,0:27:81.28:0,81,1295	0/0:18,0:17:54.14:0,54,808	0/0:11,0:11:33.11:0,33,527	0/0:47,0:47:99:0,141,2224	1/1:0,18:18:42.14:584,42,0	1/1:0,9:9:21.07:293,21,0	1/1:0,41:41:99:1636,117,0	0/0:15,0:15:45.15:0,45,718	0/0:21,0:21:63.21:0,63,1006	0/0:17,0:17:45.15:0,45,715	1/1:0,22:22:60.20:839,60,0
chr10	96170960	.	GCC	G	2410.93	PASS	AB=0.905;AC=31;AF=0.554;AN=56;BaseQRankSum=7.449;DP=397;FS=28.677;HRun=13;HaplotypeScore=57.8373;InbreedingCoeff=0.5903;MQ=68.46;MQ0=1;MQRankSum=-0.522;QD=8.77;ReadPosRankSum=4.987;VQSLOD=0.1166;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:32:54.85:239,55,0	0/0:3,0:3:6.02:0,6,85	0/0:6,0:6:6.01:0,6,71	0/1:10,0:9:14.42:14,0,49	0/0:4,0:4:5.99:0,6,50	1/1:3,8:12:7.30:84,7,0	1/1:7,16:26:35.47:314,35,0	1/1:8,12:20:36.01:349,36,0	1/1:6,7:14:17.67:157,18,0	1/1:8,3:11:2.83:73,3,0	1/1:5,0:5:2.93:23,3,0	1/1:7,13:21:35.70:332,36,0	1/1:4,10:16:23.46:198,23,0	1/1:6,6:12:5.67:58,6,0	0/0:5,0:8:16.97:0,17,148	1/1:0,0:18:46.66:203,47,0	0/0:23,1:28:25.91:0,26,490	0/0:22,0:27:47.06:0,47,529	0/0:13,0:13:11.97:0,12,113	0/0:3,0:3:3:0,3,27	0/1:29,2:33:11.15:11,0,258	1/1:1,5:6:9.48:88,9,0	0/0:3,0:4:0:0,0,0	1/1:7,16:23:20.16:382,20,0	0/0:10,0:11:17.54:0,18,206	0/1:8,1:9:20.11:20,0,40	0/0:11,0:14:20.48:0,20,190	1/1:2,2:4:6:58,6,0
chr10	96172679	.	TAA	T	20539.80	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=8.296;DP=646;FS=2.626;HRun=5;HaplotypeScore=83.4797;InbreedingCoeff=0.9954;MQ=77.62;MQ0=9;MQRankSum=-2.014;QD=36.55;ReadPosRankSum=4.440;VQSLOD=4.3447;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:66.22:924,66,0	1/1:0,5:5:15.05:210,15,0	0/0:16,0:16:34.70:0,35,571	0/0:12,0:12:33.07:0,33,551	1/1:4,27:31:72.24:1008,72,0	1/1:0,23:23:60.20:840,60,0	1/1:0,19:19:45.15:630,45,0	1/1:2,19:21:57.19:797,57,0	1/1:1,27:27:72.24:1008,72,0	1/1:0,28:28:81.23:1097,81,0	1/1:3,20:23:57.19:797,57,0	1/1:0,26:25:69.23:966,69,0	1/1:1,23:24:59.97:839,60,0	1/1:1,24:24:63.21:882,63,0	1/1:0,32:32:90.30:1260,90,0	1/1:1,27:28:63.21:882,63,0	0/0:22,0:22:66.18:0,66,1175	0/0:34,0:34:99:0,102,1814	1/1:0,21:21:63.21:881,63,0	1/1:1,29:30:78.26:1092,78,0	1/1:4,12:14:33.11:462,33,0	1/1:0,20:20:57.19:798,57,0	1/1:1,27:25:66.22:924,66,0	1/1:1,16:17:45.15:630,45,0	1/1:1,16:17:44.62:629,45,0	1/1:1,25:26:75.21:1013,75,0	1/1:1,30:30:84.28:1176,84,0	1/1:0,19:19:57.19:798,57,0
chr10	96173931	.	C	CT	4812.17	PASS	AB=0.691;AC=26;AF=0.464;AN=56;BaseQRankSum=-3.678;DP=714;FS=2.076;HRun=13;HaplotypeScore=82.8306;InbreedingCoeff=0.3687;MQ=71.02;MQ0=5;MQRankSum=0.072;QD=11.35;ReadPosRankSum=-0.794;VQSLOD=4.4750;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:10,27:38:16.01:458,0,16	0/0:8,0:9:10.89:0,11,66	0/0:43,0:23:7.13:0,7,63	0/0:20,0:11:4.50:0,4,32	0/0:31,0:31:21.29:0,21,266	1/1:3,13:17:3.28:161,3,0	0/1:6,18:25:1.42:381,0,1	0/1:19,14:35:13.67:292,0,14	1/1:7,11:20:29.74:252,30,0	0/1:12,17:30:18.13:280,0,18	1/1:7,16:25:51.28:439,51,0	0/1:9,17:29:22.53:237,0,23	1/1:6,15:21:18.47:312,18,0	1/1:3,19:22:42.05:390,42,0	0/0:42,3:46:47.58:0,48,580	1/1:6,20:26:47.92:429,48,0	0/0:30,2:32:9.64:0,10,381	0/0:14,0:15:37.71:0,38,252	0/1:23,3:27:33.05:33,0,155	0/0:14,0:14:27.94:0,28,186	0/0:20,0:23:42.07:0,42,265	1/1:5,16:21:32.71:293,33,0	0/1:10,14:27:33.47:246,0,33	1/1:2,24:28:50.73:445,51,0	0/0:26,1:28:1.12:0,1,287	0/1:16,1:20:12.77:13,0,164	0/0:26,0:27:60.24:0,60,393	1/1:7,3:12:20.29:151,20,0
chr10	96178459	.	TTA	T	100.96	PASS	AB=0.875;AC=13;AF=0.260;AN=50;BaseQRankSum=5.230;DP=211;FS=2.646;HRun=0;HaplotypeScore=60.9189;InbreedingCoeff=0.2118;MQ=80.05;MQ0=2;MQRankSum=0.572;QD=2.02;ReadPosRankSum=4.573;VQSLOD=0.8543;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:6,1:7:11.98:12,0,42	0/0:2,0:2:6.01:0,6,70	0/0:13,0:9:6.79:0,7,194	0/0:23,0:11:6.43:0,6,94	0/0:7,0:7:21.07:0,21,337	0/1:6,3:8:30.58:86,0,31	1/1:3,0:3:1.67:4,2,0	0/0:25,0:25:23.82:0,24,465	0/1:2,1:3:16.35:16,0,36	0/1:4,0:4:22.96:23,0,27	0/0:1,0:1:3.01:0,3,33	./.	1/1:1,1:2:4.55:29,5,0	1/1:0,1:1:2.97:20,3,0	0/0:3,0:3:8.98:0,9,108	1/1:0,2:2:5.93:41,6,0	0/0:19,0:19:57.19:0,57,1053	0/0:19,0:19:57.19:0,57,1116	0/0:21,0:18:54.08:0,54,860	0/0:2,0:2:6.02:0,6,121	0/0:1,0:1:3.01:0,3,61	./.	./.	0/0:3,0:3:8.97:0,9,76	0/0:12,0:12:33.08:0,33,533	0/0:4,0:4:11.99:0,12,151	0/0:5,0:4:14.84:0,15,153	0/1:19,0:19:5.05:5,0,233
chr10	96178564	.	CTGAAAAAATTTTTTATTATTTTTTTTTTGTTGTTTTTTTTTTT	C	4551.37	PASS	AC=38;AF=0.826;AN=46;BaseQRankSum=-0.294;DP=255;FS=15.925;HRun=0;HaplotypeScore=199.8231;InbreedingCoeff=0.5228;MQ=62.72;MQ0=17;MQRankSum=-5.044;QD=32.51;ReadPosRankSum=1.462;VQSLOD=2.9814;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:3.01:125,3,0	1/1:6,2:8:3.01:125,3,0	0/0:24,0:7:11.99:0,12,155	0/0:28,0:5:10.69:0,11,189	1/1:8,6:14:6.02:176,6,0	1/1:2,3:5:3.01:322,3,0	./.	1/1:15,0:15:13.28:418,13,0	./.	1/1:3,3:6:6.02:429,6,0	1/1:5,0:5:12.04:410,12,0	1/1:2,2:4:3.01:125,3,0	1/1:3,0:3:3.01:106,3,0	./.	1/1:3,3:6:6.02:165,6,0	1/1:2,0:2:3.01:123,3,0	0/0:18,0:17:42.14:0,42,5401	0/0:30,0:28:75.26:0,75,9801	1/1:10,0:8:9.03:248,9,0	1/1:10,0:10:3.01:124,3,0	1/1:4,0:4:9.03:312,9,0	./.	1/1:2,0:2:3.01:56,3,0	./.	1/1:13,0:13:15.05:465,15,0	1/1:11,0:10:12.04:333,12,0	1/1:10,0:10:6.02:274,6,0	1/1:3,0:3:6.02:216,6,0
chr10	96178578	.	T	TAAATTA	4235.80	PASS	AC=40;AF=0.800;AN=50;BaseQRankSum=1.602;DP=237;FS=16.826;HRun=0;HaplotypeScore=49.5563;InbreedingCoeff=0.5558;MQ=81.84;MQ0=10;MQRankSum=-5.296;QD=51.03;ReadPosRankSum=-2.144;VQSLOD=2.7719;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,4:7:3.01:107,3,0	1/1:4,0:4:5.99:128,6,0	0/0:42,0:15:13.38:0,13,146	0/0:52,0:15:19.36:0,19,291	1/1:10,0:10:6.02:159,6,0	0/0:3,0:3:2.94:0,3,18	./.	1/1:3,4:8:21.07:603,21,0	1/1:2,0:2:3.01:54,3,0	1/1:3,0:3:6.02:174,6,0	1/1:0,3:4:12.04:359,12,0	1/1:3,0:3:6.02:215,6,0	1/1:0,0:1:3.01:106,3,0	1/1:2,0:2:3.01:75,3,0	1/1:5,0:5:9.03:196,9,0	1/1:0,1:1:3.01:105,3,0	0/0:18,0:17:51.15:0,51,1192	0/0:32,0:30:90.31:0,90,2180	1/1:1,0:4:9.03:248,9,0	1/1:0,2:2:3.01:105,3,0	1/1:1,3:3:9.03:278,9,0	./.	1/1:1,0:1:3.01:56,3,0	./.	1/1:2,1:9:18.06:522,18,0	1/1:1,0:5:12.04:333,12,0	1/1:0,5:6:6.02:216,6,0	1/1:0,1:2:6.02:197,6,0
chr10	96179695	.	AAC	A	64.49	PASS	AB=0.942;AC=6;AF=0.111;AN=54;BaseQRankSum=2.258;DP=624;FS=4.410;HRun=0;HaplotypeScore=145.7898;InbreedingCoeff=0.0138;MQ=59.38;MQ0=9;MQRankSum=-1.699;QD=0.42;ReadPosRankSum=-2.700;VQSLOD=1.8266;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:1.15:0,1,55	0/0:9,0:9:5.90:0,6,43	0/0:32,0:19:15.03:0,15,213	0/0:38,0:29:8.61:0,9,143	0/0:14,0:14:0:0,0,0	0/1:27,0:27:39.75:40,0,47	0/0:33,0:29:9.64:0,10,113	0/0:26,0:27:13.95:0,14,148	0/0:23,0:23:9.33:0,9,58	0/0:22,0:21:25.65:0,26,146	0/0:13,0:13:5.42:0,5,26	1/1:20,0:18:0.18:20,0,0	0/0:24,0:24:18.62:0,19,104	0/0:25,0:24:0.94:0,1,41	0/0:11,0:11:8.93:0,9,72	0/0:12,0:12:2.96:0,3,23	0/1:47,9:57:61.91:62,0,1304	0/1:25,3:27:45.72:46,0,616	0/0:18,0:17:22.39:0,22,133	0/0:16,0:16:3.20:0,3,12	0/0:30,0:29:8.13:0,8,72	0/0:15,0:15:4.16:0,4,21	0/1:20,0:20:3.57:4,0,47	0/0:29,0:28:7.13:0,7,19	0/0:13,0:13:8.95:0,9,68	0/0:18,0:17:24.93:0,25,172	0/0:14,0:13:12.45:0,12,104	./.
chr10	96179711	.	C	CGG	533.64	PASS	AB=0.848;AC=7;AF=0.125;AN=56;BaseQRankSum=6.248;DP=645;FS=61.607;HRun=0;HaplotypeScore=159.6435;InbreedingCoeff=-0.1309;MQ=46.47;MQ0=15;MQRankSum=-4.606;QD=3.95;ReadPosRankSum=-1.542;VQSLOD=0.7384;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:18.13:0,18,206	0/0:9,0:9:12.03:0,12,147	0/0:32,0:10:30.10:0,30,478	0/0:40,0:26:70.33:0,70,1020	0/0:17,0:17:14.89:0,15,203	0/0:23,7:30:6.71:0,7,305	0/0:34,3:33:38.34:0,38,468	0/0:29,0:25:75.15:0,75,901	0/1:16,5:20:60.13:126,0,60	0/1:16,4:19:99:186,0,330	0/1:14,0:14:9.57:25,0,10	0/0:20,4:22:14.29:0,14,177	0/1:18,6:23:99:154,0,238	0/1:15,8:22:99:134,0,170	0/0:9,0:9:11.78:0,12,162	0/0:15,0:15:5.66:0,6,55	0/0:57,0:57:99:0,158,2279	0/0:30,1:30:35.53:0,36,1226	0/0:16,0:15:41.93:0,42,480	0/0:15,0:15:9.90:0,10,118	0/0:33,0:31:41.47:0,41,550	0/1:15,0:15:29.26:29,0,66	0/1:12,6:18:6.40:6,0,38	0/0:28,4:31:16.44:0,16,186	0/0:13,0:13:18.04:0,18,234	0/0:21,0:20:47.19:0,47,578	0/0:15,0:14:32.03:0,32,388	0/0:4,0:4:8.90:0,9,82
chr10	96179717	.	C	CGG	2899.68	PASS	AB=0.816;AC=16;AF=0.286;AN=56;BaseQRankSum=2.699;DP=663;FS=25.465;HRun=0;HaplotypeScore=159.4886;InbreedingCoeff=-0.2189;MQ=45.49;MQ0=13;MQRankSum=-4.036;QD=8.05;ReadPosRankSum=-4.015;VQSLOD=1.3927;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:19,13:30:74.60:75,0,117	0/0:9,0:9:12.04:0,12,166	0/0:29,0:10:30.10:0,30,470	0/0:36,0:23:51.54:0,52,778	0/0:18,0:18:17.91:0,18,268	0/1:27,7:34:99:386,0,218	0/1:22,14:32:5.36:5,0,297	0/1:21,10:27:99:351,0,451	0/1:14,5:19:32.86:306,0,33	0/1:21,4:24:99:433,0,312	0/1:15,0:15:6.56:88,0,7	0/1:21,4:23:99:147,0,124	0/1:19,6:24:99:314,0,189	0/1:19,8:26:99:481,0,111	0/0:11,0:11:14.77:0,15,187	1/1:5,10:15:9.36:113,9,0	0/0:54,0:54:99:0,146,2171	0/0:32,0:31:90.20:0,90,1293	0/0:17,0:16:37.69:0,38,369	0/0:13,0:13:5.64:0,6,66	0/0:32,0:30:34.48:0,34,408	0/1:18,0:18:53.25:182,0,53	0/1:8,12:21:34.13:34,0,37	0/1:29,4:32:71.91:72,0,138	0/0:15,0:15:24.05:0,24,292	0/0:23,0:22:56.32:0,56,717	0/0:14,0:13:25.88:0,26,339	0/1:3,1:4:29.41:74,0,29
chr10	96182043	.	AC	A	1192.49	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=2.107;DP=237;FS=3.729;HRun=1;HaplotypeScore=29.3220;InbreedingCoeff=0.8914;MQ=92.04;MQ0=0;MQRankSum=-1.372;QD=33.12;ReadPosRankSum=-2.229;VQSLOD=2.5858;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:21.03:271,21,0	0/0:3,0:3:9.03:0,9,144	0/0:16,0:16:48.07:0,48,710	0/0:11,0:11:16.81:0,17,458	0/0:5,0:5:15.05:0,15,215	0/0:10,0:10:30.02:0,30,437	0/0:11,0:11:33.09:0,33,502	1/1:0,18:18:54.17:739,54,0	0/0:9,0:9:27.09:0,27,425	0/0:9,0:9:27.08:0,27,408	0/0:8,0:8:24.08:0,24,361	0/0:6,0:6:18.06:0,18,277	0/0:9,0:9:27.09:0,27,428	0/0:6,0:6:18.04:0,18,263	0/0:6,0:6:18.04:0,18,263	1/1:0,4:4:12.04:168,12,0	0/0:6,0:6:18.06:0,18,287	0/0:6,0:6:12.02:0,12,168	0/0:7,0:7:21.07:0,21,336	0/0:15,0:15:42.14:0,42,671	0/0:10,0:10:30.10:0,30,476	0/0:7,0:7:21.07:0,21,323	0/0:10,0:10:30.02:0,30,440	0/0:1,0:1:3.01:0,3,48	0/0:15,0:15:45.15:0,45,718	0/0:7,0:7:21.07:0,21,336	0/0:8,0:8:21.07:0,21,335	1/1:0,7:7:12.04:167,12,0
chr10	96182744	.	AT	A	7899.19	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=18.161;DP=695;FS=2.584;HRun=1;HaplotypeScore=85.9739;InbreedingCoeff=0.9961;MQ=91.07;MQ0=0;MQRankSum=-2.787;QD=35.26;ReadPosRankSum=0.949;VQSLOD=4.9040;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,2100	1/1:0,11:11:33.07:439,33,0	0/0:31,0:31:93.30:0,93,1455	0/0:23,0:23:69.21:0,69,1072	1/1:1,27:28:75.15:987,75,0	0/0:28,0:28:78.27:0,78,1243	0/0:30,0:30:90.26:0,90,1364	0/0:26,0:26:78.26:0,78,1225	0/0:31,0:31:93.30:0,93,1450	0/0:32,0:32:93.32:0,93,1484	0/0:16,0:16:48.16:0,48,760	0/0:30,0:30:90.26:0,90,1367	0/0:38,0:38:99:0,114,1768	0/0:30,0:30:90.31:0,90,1436	1/1:0,23:23:56.89:796,57,0	0/0:19,0:19:57.19:0,57,911	0/0:22,0:22:66.23:0,66,1054	0/0:11,0:11:33.11:0,33,527	1/1:0,22:22:65.96:827,66,0	1/1:0,20:20:54.08:709,54,0	1/1:0,43:43:99:1503,111,0	0/0:13,0:13:36.12:0,36,575	0/0:5,0:5:15.03:0,15,213	0/0:35,0:35:99:0,105,1647	1/1:0,18:18:45.14:614,45,0	1/1:0,24:24:72:896,72,0	1/1:0,35:35:81.27:1130,81,0	0/0:6,0:6:18.06:0,18,287
chr10	96185008	.	CTG	C	100.64	PASS	AB=0.933;AC=10;AF=0.217;AN=46;BaseQRankSum=0.271;DP=1695;FS=1.158;HRun=0;HaplotypeScore=109.9892;InbreedingCoeff=0.1711;MQ=23.58;MQ0=563;MQRankSum=2.168;QD=0.17;ReadPosRankSum=-1.266;VQSLOD=2.0899;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:86,2:45:2.90:0,3,51	0/0:24,2:11:12.04:0,12,179	./.	./.	./.	0/1:28,3:13:0:0,0,0	0/1:78,1:37:16.31:16,0,238	0/0:69,0:18:39.10:0,39,652	0/0:40,3:20:9.03:0,9,154	0/0:83,0:36:28.82:0,29,1278	./.	0/1:80,7:52:41.58:48,0,42	0/0:57,5:27:6.02:0,6,89	0/0:54,5:31:0.93:0,1,3	0/0:93,7:54:5.93:0,6,87	1/1:41,6:17:2.94:39,3,0	0/0:33,0:30:12.04:0,12,206	0/0:46,0:42:18.95:0,19,357	0/1:46,1:21:24.42:24,0,721	0/0:55,1:30:5.63:0,6,102	0/1:199,7:90:30.16:30,0,94	0/0:49,1:32:3.01:0,3,52	1/1:38,0:22:5.98:59,6,0	0/1:54,14:28:0.01:0,0,0	0/0:54,1:20:1.24:0,1,3	0/0:81,0:38:51.35:0,51,1233	0/0:52,0:33:4.24:0,4,47	./.
chr10	96185064	.	C	CTG	2469.43	PASS	AB=0.783;AC=18;AF=0.346;AN=52;BaseQRankSum=-2.066;DP=1999;DS;FS=3.397;HRun=0;HaplotypeScore=155.5459;InbreedingCoeff=0.2811;MQ=28.76;MQ0=519;MQRankSum=0.537;QD=2.96;ReadPosRankSum=-3.692;VQSLOD=1.9926;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:64,41:55:5.26:101,5,0	0/1:38,0:18:13.05:13,0,105	./.	./.	0/0:78,6:43:29.90:0,30,392	0/1:23,12:15:0:0,0,0	0/0:65,1:22:3.01:0,3,36	0/0:49,0:4:3.01:0,3,36	0/1:31,20:30:2.80:286,0,3	0/1:66,14:40:99:545,0,646	0/1:36,8:27:27.40:142,0,27	0/1:48,38:56:7.26:453,0,7	0/1:34,40:40:8.19:403,0,8	1/1:25,31:28:15.02:257,15,0	0/0:116,3:84:39.01:0,39,512	1/1:14,30:28:4.55:101,5,0	0/0:47,0:46:26.91:0,27,353	0/0:46,0:36:51.16:0,51,663	0/0:66,2:25:11.76:0,12,706	0/0:87,4:59:36.05:0,36,443	0/0:237,13:161:68.75:0,69,870	0/1:37,9:24:0:0,0,0	0/1:34,8:25:0:0,0,0	1/1:62,42:64:14.99:223,15,0	0/0:81,4:39:15.04:0,15,184	0/0:108,3:46:57.72:0,58,1355	0/0:70,4:48:40.24:0,40,549	0/1:13,13:23:25.98:98,0,26
chr10	96185442	.	AC	A	6178.46	PASS	AB=0.676;AC=15;AF=0.268;AN=56;BaseQRankSum=6.918;DP=1730;DS;FS=13.340;HRun=1;HaplotypeScore=287.7529;InbreedingCoeff=-0.2381;MQ=38.28;MQ0=322;MQRankSum=-2.736;QD=10.16;ReadPosRankSum=-0.538;VQSLOD=0.7627;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,30:39:99:676,0,275	0/0:34,0:27:52.41:0,52,805	0/0:67,1:5:12.04:0,12,181	0/0:85,0:6:6.69:0,7,225	0/0:78,0:53:78.47:0,78,1237	0/1:10,14:18:99:412,0,102	0/1:13,27:31:66.05:303,0,66	0/1:24,8:9:14.83:15,0,315	0/1:28,28:46:99:618,0,466	0/1:44,21:34:99:642,0,468	0/1:10,11:14:72.21:72,0,83	0/1:34,32:57:99:582,0,409	0/1:33,26:52:99:650,0,622	0/1:30,24:43:99:566,0,512	0/0:107,0:92:99:0,190,2940	0/1:15,25:36:99:824,0,158	0/0:53,0:41:99:0,104,1545	0/0:41,0:31:84.29:0,84,1326	0/0:58,0:14:39.13:0,39,623	0/0:83,0:59:99:0,99,1568	0/0:205,0:174:99:0,358,5609	0/1:22,13:26:99:134,0,253	0/0:29,11:30:0.88:0,1,311	0/1:34,33:53:99:600,0,546	0/0:90,0:67:99:0,104,1585	0/0:124,0:78:99:0,214,3332	0/0:56,0:47:99:0,117,1864	1/1:2,2:3:6.02:84,6,0
chr10	96185479	.	GAC	G	1134.45	PASS	AB=0.818;AC=17;AF=0.327;AN=52;BaseQRankSum=9.612;DP=1115;DS;FS=30.626;HRun=0;HaplotypeScore=214.0706;InbreedingCoeff=-0.0840;MQ=49.05;MQ0=80;MQRankSum=-4.152;QD=2.49;ReadPosRankSum=2.370;VQSLOD=1.2915;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,9:9:15.05:211,15,0	0/0:20,5:20:9.50:0,9,837	0/0:76,0:40:99:0,120,1772	0/0:103,0:53:99:0,128,2030	0/1:32,8:34:11.41:11,0,1062	0/0:11,4:7:8.45:0,8,45	0/0:22,2:17:4.27:0,4,21	./.	0/1:17,11:22:62.56:63,0,111	0/1:29,0:19:7.13:7,0,81	1/1:8,0:7:0.47:1,0,0	0/1:28,10:30:99:135,0,113	0/1:24,5:26:71.89:185,0,72	0/1:21,8:22:24.18:24,0,78	0/1:70,22:78:99:222,0,2287	./.	0/0:51,1:42:99:0,108,1841	0/1:28,4:25:19.94:20,0,933	0/0:27,0:27:80.75:0,81,1424	0/0:43,4:43:67.28:0,67,1887	0/0:155,11:155:99:0,331,7233	0/1:9,2:9:12.24:37,0,12	0/0:23,0:19:10.82:0,11,63	0/1:20,21:30:99:101,0,101	0/0:44,10:45:46:0,46,1318	0/1:49,15:46:99:226,0,1628	0/0:30,8:33:8.13:0,8,1085	1/1:0,2:1:3.01:44,3,0
chr10	96185510	.	CTG	C	66.88	PASS	AB=0.836;AC=9;AF=0.167;AN=54;BaseQRankSum=5.938;DP=954;FS=5.381;HRun=0;HaplotypeScore=145.0412;InbreedingCoeff=0.1363;MQ=44.97;MQ0=112;MQRankSum=-5.139;QD=0.41;ReadPosRankSum=-3.825;VQSLOD=1.1696;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,5:3:4.87:17,5,0	0/0:24,0:19:42.14:0,42,719	0/1:66,0:9:12.48:12,0,97	0/0:62,0:20:23.50:0,23,302	0/0:31,0:28:65.97:0,66,1127	0/0:9,4:4:3.01:0,3,51	0/0:18,1:13:1.12:0,1,287	0/0:8,1:4:12:0,12,131	0/1:14,4:12:18.31:18,0,282	0/0:23,1:14:21.04:0,21,311	./.	0/0:24,6:21:12:0,12,174	0/1:16,3:17:56.45:56,0,220	0/1:12,6:9:33.36:33,0,45	0/0:82,2:70:99:0,135,2565	1/1:2,4:4:2.97:37,3,0	0/0:52,0:50:99:0,131,2177	0/0:37,1:35:87.30:0,87,1487	0/0:35,0:19:39.13:0,39,669	0/0:46,0:44:99:0,111,1867	0/0:144,5:138:99:0,297,5566	0/0:7,0:4:12.04:0,12,204	0/0:17,0:13:12.04:0,12,204	0/1:18,9:18:24.22:24,0,234	0/0:43,0:37:66.23:0,66,1124	0/0:66,0:49:99:0,126,2161	0/0:37,0:33:84.03:0,84,1426	0/0:1,0:1:3.01:0,3,51
chr10	96185596	.	C	CTG	10965.59	PASS	AB=0.703;AC=19;AF=0.339;AN=56;BaseQRankSum=-13.000;DP=1351;FS=0.590;HRun=0;HaplotypeScore=154.1883;InbreedingCoeff=0.5682;MQ=44.65;MQ0=191;MQRankSum=4.400;QD=23.43;ReadPosRankSum=0.009;VQSLOD=5.1575;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:59:99:0,153,1915	0/0:23,1:19:32.97:0,33,376	0/0:83,0:3:3.01:0,3,39	0/1:85,0:7:15.09:15,0,129	0/0:61,4:52:75.20:0,75,966	0/1:10,18:23:99:519,0,112	0/1:17,17:27:43.05:451,0,43	0/0:33,0:27:60.19:0,60,787	1/1:13,23:30:69.24:1167,69,0	0/1:18,27:36:94.84:1326,0,95	1/1:8,21:24:11.40:783,11,0	1/1:11,25:28:69.24:1183,69,0	1/1:9,30:32:14.55:1314,15,0	1/1:9,24:27:69.24:1178,69,0	0/0:75,0:63:99:0,124,1778	0/0:34,0:33:84.20:0,84,1057	0/0:41,0:38:79.33:0,79,1261	0/0:31,0:31:81.18:0,81,1025	0/0:50,0:20:54.15:0,54,679	0/0:64,3:54:99:0,99,1280	0/0:124,1:115:99:0,284,3665	1/1:14,24:33:41.49:1262,41,0	0/1:11,18:26:21.64:816,0,22	1/1:11,25:31:57.18:951,57,0	0/0:57,2:49:76.06:0,76,927	0/0:85,1:65:99:0,118,2116	0/0:38,1:36:90.24:0,90,1149	0/0:7,0:7:12.04:0,12,148
chr10	96190720	.	AAACCTCGCC	A	15205.32	PASS	AB=0.523;AC=17;AF=0.304;AN=56;BaseQRankSum=17.885;DP=692;FS=0.319;HRun=0;HaplotypeScore=202.0755;InbreedingCoeff=0.9139;MQ=83.17;MQ0=0;MQRankSum=-17.989;QD=73.81;ReadPosRankSum=3.680;VQSLOD=4.5699;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,5745	1/1:0,8:8:18.06:551,18,0	0/0:26,0:27:56.39:0,56,2821	0/0:23,0:21:60.12:0,60,2331	1/1:3,25:28:69.19:1989,69,0	0/0:19,0:19:54.19:0,54,2555	0/0:21,0:21:57.18:0,57,2585	0/0:19,0:19:48.16:0,48,1958	0/0:32,0:32:93.31:0,93,4207	0/0:24,0:24:72.25:0,72,3224	0/0:16,0:16:48.16:0,48,2117	0/0:30,0:30:87.30:0,87,3935	0/0:34,0:34:99:0,99,4514	0/0:37,0:37:99:0,105,5024	1/1:3,23:26:66.23:2021,66,0	0/0:17,0:17:51.18:0,51,2440	0/0:33,0:33:93.31:0,93,4159	0/0:19,0:19:57.20:0,57,2615	1/1:6,17:23:51.16:1371,51,0	1/1:2,24:26:69.19:2006,69,0	1/1:1,12:13:30.10:831,30,0	0/0:26,0:26:72.25:0,72,3271	0/0:31,0:31:90.30:0,90,4218	0/0:24,0:24:72.25:0,72,3269	1/1:0,19:19:54.19:1654,54,0	0/1:2,21:23:82.78:1730,0,83	1/1:4,36:40:99:3052,102,0	0/0:11,0:11:27.09:0,27,1302
chr10	96192274	.	AG	A	9062.33	PASS	AB=0.931;AC=23;AF=0.411;AN=56;BaseQRankSum=15.526;DP=669;FS=6.706;HRun=1;HaplotypeScore=65.5517;InbreedingCoeff=0.9519;MQ=74.45;MQ0=0;MQRankSum=0.376;QD=34.59;ReadPosRankSum=3.179;VQSLOD=4.5977;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,2043	0/0:9,0:9:27.08:0,27,408	0/0:22,0:22:49.32:0,49,823	0/0:19,0:19:47.48:0,47,672	0/0:20,0:20:60.20:0,60,953	1/1:0,24:24:66.22:923,66,0	1/1:0,21:21:51.17:713,51,0	0/0:42,0:42:99:0,126,1888	1/1:0,17:17:45.15:629,45,0	1/1:0,38:38:99:1530,114,0	1/1:0,27:27:78.26:1089,78,0	1/1:0,17:17:48.16:671,48,0	1/1:0,20:20:57.15:775,57,0	1/1:0,21:21:55.43:758,55,0	0/0:38,0:38:99:0,114,1798	0/0:18,0:18:54.12:0,54,833	0/0:32,0:32:96.31:0,96,1508	0/0:31,0:31:90.29:0,90,1413	0/0:22,0:22:66.22:0,66,1033	0/0:34,0:34:99:0,99,1576	0/0:22,0:22:66.23:0,66,1055	1/1:0,20:20:54.18:755,54,0	1/1:0,16:16:48.16:671,48,0	1/1:0,14:14:39.13:545,39,0	0/0:16,0:16:48.13:0,48,720	0/1:25,2:27:2.62:3,0,1098	0/0:26,0:26:78.21:0,78,1217	0/0:12,0:12:36.12:0,36,575
chr10	96192971	.	GA	G	1185.03	PASS	AB=0.822;AC=25;AF=0.446;AN=56;BaseQRankSum=1.247;DP=462;FS=0.462;HRun=16;HaplotypeScore=63.8581;InbreedingCoeff=0.6232;MQ=56.46;MQ0=22;MQRankSum=3.046;QD=4.47;ReadPosRankSum=1.414;VQSLOD=1.1394;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:37:34.53:100,35,0	0/1:2,8:10:3.10:72,0,3	0/0:26,1:4:11.02:0,11,55	0/1:29,0:8:5.84:6,0,27	1/1:7,20:28:34.24:296,34,0	0/0:15,1:14:17.38:0,17,232	0/1:8,0:8:1.53:2,0,63	1/1:10,11:21:4.24:143,4,0	0/1:7,1:8:0.48:0,0,73	0/0:18,0:19:45.94:0,46,354	0/0:21,1:23:43.05:0,43,297	0/0:10,0:9:5.98:0,6,154	0/0:10,0:9:16.72:0,17,118	0/0:8,0:8:17.07:0,17,116	0/0:7,0:7:3:0,3,25	1/1:3,0:11:10.14:29,10,0	0/0:20,1:20:26.39:0,26,298	0/0:16,0:15:35.65:0,36,280	0/1:9,9:19:2.70:132,0,3	1/1:4,4:11:18.52:96,19,0	1/1:2,1:3:5.87:35,6,0	0/0:11,0:12:8.83:0,9,170	0/0:14,0:15:26.50:0,27,193	0/0:7,0:8:11.99:0,12,101	1/1:6,12:18:3.34:124,3,0	1/1:7,12:20:6.89:141,7,0	1/1:8,13:20:16.42:95,16,0	1/1:9,7:14:17.42:105,17,0
chr10	96193312	.	CT	C	1396.70	PASS	AB=0.776;AC=19;AF=0.339;AN=56;BaseQRankSum=5.476;DP=552;FS=21.004;HRun=15;HaplotypeScore=63.5674;InbreedingCoeff=0.4166;MQ=62.22;MQ0=2;MQRankSum=0.007;QD=5.50;ReadPosRankSum=4.625;VQSLOD=0.7367;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:25:47.71:0,48,385	1/1:4,8:13:25.58:160,26,0	0/1:15,1:10:15.76:16,0,53	0/0:13,1:9:10.96:0,11,62	1/1:11,17:30:40.31:245,40,0	0/0:27,1:31:35.83:0,36,462	0/0:13,0:14:35.83:0,36,304	0/0:20,0:36:62.37:0,62,382	0/0:10,0:10:20.99:0,21,182	0/1:23,4:27:17.10:17,0,345	0/0:24,3:28:14.58:0,15,396	0/0:11,0:11:17.79:0,18,140	0/1:13,4:17:30.76:31,0,241	0/0:11,0:11:14.03:0,14,111	1/1:4,14:19:37.47:236,37,0	0/0:15,2:18:9.31:0,9,314	0/0:25,2:29:46.20:0,46,469	0/0:13,1:15:9.40:0,9,171	0/1:6,6:15:46.32:100,0,46	1/1:5,13:18:6.03:165,6,0	0/1:7,4:13:44.47:44,0,77	0/1:23,3:26:3.82:4,0,336	0/0:25,1:27:34.54:0,35,409	0/0:15,0:15:37.03:0,37,292	1/1:3,13:17:14.10:210,14,0	1/1:7,11:20:27.48:165,27,0	0/1:8,14:23:9.29:193,0,9	0/0:6,1:13:7.23:0,7,146
chr10	96193855	.	AC	A	8935.86	PASS	AB=1.000;AC=55;AF=0.982;AN=56;BaseQRankSum=0.877;DP=646;FS=0.000;HRun=3;HaplotypeScore=128.6882;InbreedingCoeff=-0.0201;MQ=79.81;MQ0=0;MQRankSum=-0.982;QD=13.83;ReadPosRankSum=5.571;VQSLOD=3.9334;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,41:42:99:636,111,0	1/1:0,6:6:17.33:93,17,0	1/1:16,0:17:33.06:202,33,0	0/1:12,0:12:33.28:107,0,33	1/1:2,27:29:75.68:429,76,0	1/1:3,25:28:69.57:386,70,0	1/1:0,29:29:72.08:390,72,0	1/1:0,31:31:88.79:461,89,0	1/1:2,22:24:19.08:270,19,0	1/1:0,23:23:62.31:310,62,0	1/1:1,25:26:71.70:396,72,0	1/1:0,22:22:57.66:305,58,0	1/1:3,28:31:75.11:416,75,0	1/1:1,21:22:57.73:312,58,0	1/1:3,23:26:11.22:248,11,0	1/1:1,21:22:60.47:318,60,0	1/1:0,17:17:49.09:265,49,0	1/1:2,17:19:46.05:251,46,0	1/1:0,19:19:54.57:311,55,0	1/1:1,20:21:55.38:333,55,0	1/1:1,25:26:59.36:320,59,0	1/1:0,15:15:43.45:242,43,0	1/1:2,23:25:47.96:301,48,0	1/1:0,17:17:46.03:240,46,0	1/1:3,32:35:85.34:458,85,0	1/1:0,30:30:83.29:442,83,0	1/1:1,21:22:55.31:321,55,0	1/1:0,10:10:29.10:172,29,0
chr10	96194666	.	C	CAA	7330.86	PASS	AB=0.575;AC=45;AF=0.804;AN=56;BaseQRankSum=-1.434;DP=525;FS=3.025;HRun=3;HaplotypeScore=100.6016;InbreedingCoeff=0.5937;MQ=61.78;MQ0=8;MQRankSum=0.171;QD=15.66;ReadPosRankSum=-0.440;VQSLOD=1.8323;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:22:49.42:303,49,0	0/1:3,7:10:10.42:118,0,10	0/0:12,0:8:17.67:0,18,133	0/0:16,0:7:4.62:0,5,42	1/1:4,18:22:29.77:270,30,0	1/1:15,0:15:44.14:364,44,0	1/1:18,0:18:47.73:360,48,0	1/1:36,0:34:95.80:851,96,0	1/1:22,0:22:54.09:367,54,0	1/1:20,0:20:51.19:416,51,0	1/1:17,0:16:39.87:347,40,0	1/1:22,0:22:41.86:332,42,0	1/1:19,0:19:44.45:336,44,0	1/1:18,0:19:52.79:381,53,0	1/1:3,23:26:2.97:20,3,0	1/1:19,0:19:44.44:286,44,0	0/0:19,0:18:44.72:0,45,400	0/0:10,0:10:20.68:0,21,192	1/1:20,0:19:33.73:359,34,0	1/1:18,3:21:47.70:506,48,0	0/1:5,12:19:0.91:97,0,1	1/1:15,0:16:38.50:290,39,0	1/1:13,0:13:29.90:245,30,0	1/1:21,0:19:41.30:285,41,0	0/1:3,10:14:16.93:49,0,17	1/1:2,21:26:51.07:584,51,0	1/1:4,17:20:5.91:109,6,0	1/1:1,6:6:3.01:55,3,0
chr10	96194671	.	AGAG	A	904.17	PASS	AB=0.787;AC=12;AF=0.214;AN=56;BaseQRankSum=11.574;DP=516;FS=9.693;HRun=0;HaplotypeScore=119.8532;InbreedingCoeff=-0.3072;MQ=59.82;MQ0=9;MQRankSum=-4.550;QD=4.00;ReadPosRankSum=3.143;VQSLOD=1.1424;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:22:57.31:57,0,74	0/0:8,0:8:12.02:0,12,236	0/0:11,0:7:17.95:0,18,206	0/1:16,0:7:28.68:29,0,52	0/0:26,0:26:32.90:0,33,503	0/0:13,2:15:15.18:0,15,182	0/1:13,3:17:18.32:18,0,155	0/0:38,0:36:98.04:0,98,542	0/1:10,11:21:99:285,0,107	0/1:19,3:22:80.76:81,0,150	0/0:15,0:14:0.06:0,0,110	0/1:12,6:21:99:164,0,159	0/1:14,1:18:77.10:77,0,116	0/1:12,4:17:99:104,0,109	0/0:21,0:21:12.04:0,12,229	0/1:11,0:19:51.60:52,0,101	0/0:18,0:17:51.17:0,51,806	0/0:9,0:9:20.82:0,21,420	0/0:22,0:21:55.23:0,55,627	0/0:19,0:19:40.99:0,41,515	0/0:19,0:19:11.88:0,12,281	0/1:14,2:18:41.26:41,0,70	0/1:13,1:15:24.24:24,0,85	0/1:11,6:17:82:120,0,82	0/0:14,0:14:12.04:0,12,251	0/0:28,0:27:77.26:0,77,1062	0/0:19,0:17:12.04:0,12,244	0/0:7,0:6:3.01:0,3,68
chr10	96194809	.	GA	G	6552.26	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.678;DP=571;FS=3.989;HRun=2;HaplotypeScore=54.5065;InbreedingCoeff=0.9984;MQ=58.50;MQ0=1;MQRankSum=0.488;QD=34.13;ReadPosRankSum=0.422;VQSLOD=4.8680;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1528	1/1:0,14:14:42.14:545,42,0	0/0:22,0:20:60.13:0,60,832	0/0:25,0:16:42.12:0,42,592	1/1:0,20:20:42.14:540,42,0	0/0:25,0:25:72.24:0,72,1079	0/0:26,0:26:78.26:0,78,1169	0/0:38,0:36:99:0,105,1531	0/0:10,0:10:30.10:0,30,449	0/0:19,0:19:57.19:0,57,855	0/0:13,0:13:39.13:0,39,585	0/0:15,0:15:42.14:0,42,624	0/0:19,0:19:57.17:0,57,817	0/0:8,0:8:21.07:0,21,315	1/1:0,26:26:75.24:974,75,0	0/0:15,0:15:45.15:0,45,674	0/0:28,0:28:78.26:0,78,1169	0/0:18,0:18:54.14:0,54,761	1/1:0,17:16:45.11:566,45,0	1/1:0,11:11:27.09:350,27,0	1/1:2,34:36:96.31:1246,96,0	0/0:9,0:9:24.08:0,24,359	0/0:13,0:13:36.12:0,36,539	0/0:33,0:32:90.30:0,90,1349	1/1:0,16:16:45.15:584,45,0	1/1:2,23:25:69.22:892,69,0	1/1:1,26:27:66.21:855,66,0	0/0:8,0:8:24.08:0,24,359
chr10	96194896	.	GA	G	6690.96	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=5.454;DP=519;FS=2.718;HRun=11;HaplotypeScore=56.2239;InbreedingCoeff=0.8646;MQ=61.84;MQ0=7;MQRankSum=-1.009;QD=15.97;ReadPosRankSum=-0.704;VQSLOD=5.3026;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:65.92:542,66,0	1/1:3,6:9:23.94:193,24,0	0/0:26,0:4:3:0,3,25	0/0:22,0:9:18:0,18,165	1/1:11,14:25:47.90:393,48,0	1/1:7,17:25:23.98:393,24,0	1/1:1,11:12:23.96:197,24,0	1/1:9,18:26:49.91:409,50,0	1/1:3,7:10:20.97:172,21,0	1/1:7,13:21:11.98:294,12,0	1/1:5,10:16:28.99:228,29,0	1/1:5,8:13:20.96:172,21,0	1/1:2,9:12:11.02:80,11,0	1/1:1,12:13:26.95:222,27,0	1/1:7,12:19:3.93:239,4,0	1/1:4,10:14:29.95:246,30,0	0/0:30,0:30:72.18:0,72,768	0/0:22,0:21:45.11:0,45,479	1/1:11,16:26:56.88:462,57,0	1/1:5,15:18:44.94:369,45,0	1/1:5,8:13:23.96:197,24,0	1/1:3,12:15:32.95:271,33,0	1/1:6,9:15:20.26:170,20,0	1/1:7,15:21:32.94:271,33,0	1/1:3,12:14:32.95:271,33,0	1/1:7,11:18:8.19:264,8,0	1/1:7,16:23:53.91:440,54,0	1/1:1,8:9:23.97:197,24,0
chr10	96195093	.	C	CA	777.63	PASS	AB=0.917;AC=5;AF=0.089;AN=56;BaseQRankSum=-7.031;DP=429;FS=3.578;HRun=9;HaplotypeScore=54.3443;InbreedingCoeff=0.7239;MQ=75.14;MQ0=0;MQRankSum=-0.070;QD=16.55;ReadPosRankSum=1.153;VQSLOD=3.7865;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:63.17:697,63,0	0/0:6,0:6:18:0,18,156	0/0:15,0:13:20.71:0,21,161	0/0:9,0:8:0.82:0,1,46	0/0:28,0:28:77.94:0,78,668	0/0:19,0:19:56.99:0,57,495	0/0:9,0:9:23.96:0,24,204	0/0:35,0:35:80.93:0,81,701	0/0:12,0:12:35.99:0,36,313	0/0:25,0:25:65.99:0,66,573	0/0:13,0:13:29.98:0,30,260	0/0:10,0:10:29.99:0,30,260	0/0:13,0:13:38.99:0,39,339	0/0:9,0:9:26.99:0,27,234	0/0:14,0:14:38.74:0,39,324	1/1:1,10:11:18.05:199,18,0	0/0:23,0:23:59.98:0,60,521	0/0:30,0:30:77.97:0,78,677	0/0:22,1:23:26.80:0,27,462	0/0:18,1:19:11.80:0,12,331	0/0:3,0:3:9:0,9,78	0/0:3,0:3:9:0,9,78	0/0:7,0:7:21:0,21,182	0/0:7,0:7:17.99:0,18,156	0/0:20,0:20:56.99:0,57,495	0/0:14,0:14:41.99:0,42,365	0/0:16,0:16:47.99:0,48,417	0/1:10,1:11:0.19:0,0,227
chr10	96197200	.	CG	C	4500.25	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=-2.365;DP=484;FS=2.974;HRun=2;HaplotypeScore=83.3323;InbreedingCoeff=0.6647;MQ=55.54;MQ0=7;MQRankSum=-2.547;QD=10.07;ReadPosRankSum=-3.583;VQSLOD=1.5331;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:33.01:210,33,0	1/1:19,0:19:13.08:84,13,0	0/1:6,0:5:2.30:2,0,15	0/1:6,0:5:7.75:8,0,20	1/1:20,1:21:18.58:182,19,0	1/1:13,3:16:26.58:263,27,0	1/1:16,2:18:12.08:183,12,0	1/1:23,0:22:39.69:264,40,0	1/1:7,1:8:19.14:140,19,0	1/1:22,2:24:43.02:377,43,0	1/1:18,1:19:15.92:149,16,0	1/1:17,2:18:8.55:178,9,0	1/1:14,2:16:8.24:127,8,0	1/1:11,1:12:11.81:160,12,0	1/1:13,0:13:11.94:48,12,0	1/1:8,1:9:18.88:144,19,0	0/0:24,0:24:60.18:0,60,638	0/0:13,0:13:33.04:0,33,420	1/1:20,0:18:30.68:197,31,0	1/1:32,0:31:53.78:351,54,0	1/1:12,0:11:17.99:114,18,0	1/1:24,1:25:18.79:190,19,0	1/1:21,2:23:25.23:237,25,0	1/1:17,5:22:18.95:242,19,0	1/1:15,0:15:20.86:158,21,0	1/1:16,0:16:31.80:207,32,0	1/1:20,0:20:25.63:162,26,0	1/1:9,0:8:22.51:123,23,0
chr10	96197201	.	G	GA	1156.30	PASS	AB=0.791;AC=21;AF=0.375;AN=56;BaseQRankSum=1.383;DP=502;FS=9.910;HRun=0;HaplotypeScore=102.2268;InbreedingCoeff=0.0924;MQ=57.20;MQ0=7;MQRankSum=2.562;QD=4.19;ReadPosRankSum=-3.011;VQSLOD=1.9447;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,6:27:11:87,0,11	0/1:8,10:18:25.49:56,0,25	0/1:6,0:5:0.10:0,0,10	0/0:8,0:6:7.21:0,7,66	0/1:9,12:21:33.82:97,0,34	0/0:14,0:16:3.41:0,3,78	0/0:18,0:19:27.57:0,28,132	0/1:18,6:23:23.06:71,0,23	0/1:6,0:7:2.86:17,0,3	0/0:25,0:26:18.05:0,18,70	0/0:20,0:20:25.31:0,25,119	0/1:18,1:18:22.30:22,0,72	0/0:16,0:16:26.08:0,26,127	0/0:12,0:13:2.17:0,2,48	0/1:11,4:15:40.67:86,0,41	1/1:5,1:11:8.83:72,9,0	0/0:26,0:26:63.08:0,63,816	0/0:13,0:13:33.04:0,33,435	0/1:12,5:17:10.10:95,0,10	1/1:21,11:31:4.89:274,5,0	0/1:6,5:11:25.54:61,0,26	0/0:24,0:24:46.23:0,46,227	0/0:22,0:23:9.02:0,9,112	0/0:22,0:22:38.60:0,39,165	1/1:8,8:17:3.22:54,3,0	0/1:13,4:17:6.64:73,0,7	1/1:18,3:22:0.57:106,1,0	1/1:3,6:8:16.87:149,17,0
chr10	96199888	.	GCACA	G	1126.83	PASS	AB=0.963;AC=39;AF=0.780;AN=50;BaseQRankSum=7.020;DP=481;FS=0.929;HRun=0;HaplotypeScore=123.1078;InbreedingCoeff=0.4644;MQ=51.98;MQ0=23;MQRankSum=-4.387;QD=3.41;ReadPosRankSum=2.045;VQSLOD=2.4602;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:5,0:5:0.11:0,0,0	./.	./.	1/1:9,1:9:3.01:36,3,0	1/1:13,0:13:5.68:39,6,0	0/0:21,0:21:0.47:0,0,1	0/0:16,0:14:5.89:0,6,37	1/1:12,0:12:12.01:110,12,0	0/1:9,0:8:2.37:21,0,2	1/1:10,0:10:2.90:16,3,0	1/1:23,0:21:17.45:138,17,0	1/1:20,0:18:11.78:104,12,0	1/1:19,0:18:10.51:78,11,0	1/1:17,0:16:9:92,9,0	0/1:7,0:7:0:0,0,0	0/0:34,0:33:44.72:0,45,689	0/0:31,0:28:29.16:0,29,432	1/1:15,1:15:11.71:83,12,0	1/1:11,1:12:6.02:70,6,0	1/1:33,0:27:3.01:39,3,0	1/1:9,0:9:2.94:18,3,0	1/1:19,0:19:5.22:34,5,0	1/1:36,0:32:9.81:72,10,0	1/1:21,0:21:6.02:67,6,0	1/1:18,1:19:11.86:149,12,0	1/1:12,0:12:6.01:65,6,0	1/1:6,0:4:3:27,3,0
chr10	96199934	.	A	ACGCGCG	3182.23	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=0.007;DP=567;FS=3.274;HRun=0;HaplotypeScore=155.7823;InbreedingCoeff=0.8989;MQ=49.71;MQ0=26;MQRankSum=-1.089;QD=18.50;ReadPosRankSum=-1.645;VQSLOD=3.0847;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:45:21.07:0,21,479	1/1:12,0:11:17.96:429,18,0	0/0:19,0:12:33.03:0,33,584	0/0:25,0:9:26.98:0,27,549	1/1:10,0:9:17.60:304,18,0	0/0:18,0:17:26.99:0,27,525	0/0:19,0:19:21.06:0,21,483	0/0:2,0:7:18.05:0,18,333	0/0:16,0:16:28.74:0,29,516	0/0:15,0:14:39.11:0,39,758	0/0:11,0:11:12.50:0,12,226	0/0:23,0:22:29.94:0,30,562	0/0:23,0:21:31.89:0,32,537	0/0:23,0:23:40.11:0,40,737	1/1:14,0:13:15.19:298,15,0	0/0:6,0:5:6.02:0,6,123	0/0:36,0:35:77.42:0,77,1536	0/0:27,0:24:65:0,65,1210	1/1:25,0:20:13.73:454,14,0	1/1:15,0:14:20.85:368,21,0	1/1:9,20:29:2.60:10,3,0	0/0:11,0:11:12.51:0,13,277	0/0:18,0:18:12.04:0,12,267	0/0:45,0:44:48.49:0,48,942	1/1:17,0:17:15.65:355,16,0	1/1:25,0:25:53.66:816,54,0	1/1:22,0:21:15.05:352,15,0	0/0:4,0:2:3.01:0,3,42
chr10	96200020	.	C	CA	10171.65	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-13.464;DP=595;FS=1.026;HRun=4;HaplotypeScore=63.4555;InbreedingCoeff=0.9950;MQ=91.75;MQ0=0;MQRankSum=-2.101;QD=33.24;ReadPosRankSum=1.854;VQSLOD=5.5074;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,28:32:72.24:984,72,0	0/0:6,0:6:18.05:0,18,204	0/0:26,0:26:14.12:0,14,632	0/0:32,0:32:71.35:0,71,737	0/0:27,0:27:78.21:0,78,874	1/1:1,26:27:69.23:944,69,0	1/1:1,16:17:33.11:451,33,0	1/1:1,18:19:50.89:681,51,0	1/1:1,13:14:36.08:471,36,0	1/1:4,22:26:66.18:867,66,0	1/1:1,14:15:42.14:575,42,0	1/1:1,17:18:51.17:698,51,0	1/1:4,20:24:57.19:780,57,0	1/1:2,19:21:42.14:575,42,0	0/0:18,0:18:51.15:0,51,579	1/1:0,11:11:30.10:410,30,0	0/0:30,0:30:87.25:0,87,987	0/0:28,0:28:84.17:0,84,926	0/0:20,0:20:48.14:0,48,545	0/0:23,0:23:60.17:0,60,680	0/0:14,0:14:21.06:0,21,238	1/1:2,20:22:54.15:719,54,0	1/1:0,24:24:69.23:944,69,0	1/1:3,26:29:60.16:800,60,0	0/0:23,0:23:57.16:0,57,647	0/0:19,0:19:51.14:0,51,578	0/0:23,0:23:63.16:0,63,705	1/1:1,6:7:21.06:275,21,0
chr10	96200972	.	CA	C	13278.17	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=5.384;DP=617;FS=29.822;HRun=1;HaplotypeScore=106.6983;InbreedingCoeff=0.9951;MQ=76.96;MQ0=0;MQRankSum=-5.250;QD=24.41;ReadPosRankSum=4.818;VQSLOD=3.2597;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,39:41:99:1030,108,0	1/1:0,8:8:15.02:143,15,0	0/0:18,0:18:45.97:0,46,568	0/0:18,0:18:45.41:0,45,652	1/1:6,23:29:66.11:629,66,0	1/1:1,25:26:69.11:658,69,0	1/1:2,19:21:57.09:543,57,0	1/1:9,25:34:69.08:647,69,0	1/1:2,25:27:69.11:658,69,0	1/1:1,25:26:75.12:715,75,0	1/1:0,16:16:45.07:429,45,0	1/1:1,22:23:66.11:629,66,0	1/1:5,17:22:57.07:533,57,0	1/1:1,16:17:45.07:429,45,0	1/1:3,24:27:69.11:658,69,0	1/1:2,21:23:60.10:572,60,0	0/0:22,0:22:53.08:0,53,964	0/0:15,0:15:42.09:0,42,608	1/1:5,20:25:63.09:597,63,0	1/1:3,8:11:26.26:236,26,0	1/1:3,26:29:78.12:744,78,0	1/1:3,13:16:36.06:343,36,0	1/1:0,16:16:42.07:400,42,0	1/1:3,26:29:72.12:687,72,0	1/1:1,13:14:39.06:372,39,0	1/1:1,25:26:72.09:679,72,0	1/1:4,22:26:66.11:629,66,0	1/1:1,11:12:33.05:315,33,0
chr10	96203356	.	CA	C	2733.09	PASS	AB=0.754;AC=27;AF=0.482;AN=56;BaseQRankSum=10.053;DP=584;FS=1.688;HRun=14;HaplotypeScore=70.9292;InbreedingCoeff=0.5273;MQ=75.04;MQ0=3;MQRankSum=-1.334;QD=7.81;ReadPosRankSum=3.927;VQSLOD=2.9768;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,25:36:43.68:421,44,0	0/0:5,0:5:12.01:0,12,111	0/1:24,1:17:11.94:12,0,83	0/1:21,0:16:19.58:20,0,30	0/0:27,0:27:53.96:0,54,482	1/1:3,28:32:73.44:499,73,0	1/1:3,12:17:30.81:197,31,0	1/1:4,0:32:56.90:166,57,0	0/1:8,12:20:1.21:138,0,1	0/1:12,12:24:31.76:165,0,32	1/1:9,13:22:32.59:226,33,0	1/1:6,4:10:14.76:102,15,0	0/1:17,4:22:55.74:110,0,56	1/1:8,9:17:23.67:163,24,0	0/0:27,0:27:33.40:0,33,424	0/1:5,8:13:1.01:137,0,1	0/0:21,2:23:2.94:0,3,326	0/0:22,0:22:41.80:0,42,341	0/0:15,0:17:41.51:0,42,346	0/0:26,4:32:12.28:0,12,467	0/0:9,0:9:21:0,21,186	1/1:2,10:13:25.81:170,26,0	0/1:7,15:23:6.43:188,0,6	1/1:4,11:15:29.67:204,30,0	0/0:27,0:27:66:0,66,592	0/0:18,3:21:12.76:0,13,388	0/0:23,1:24:33.41:0,33,429	1/1:3,0:7:6.09:18,6,0
chr10	96203690	.	T	TAA	2718.18	PASS	AB=0.849;AC=19;AF=0.339;AN=56;BaseQRankSum=-0.600;DP=611;FS=0.420;HRun=14;HaplotypeScore=106.0107;InbreedingCoeff=0.7593;MQ=77.65;MQ0=1;MQRankSum=0.923;QD=10.07;ReadPosRankSum=-4.965;VQSLOD=1.0413;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:37:48.44:0,48,395	0/1:4,2:8:49.55:50,0,51	0/0:28,0:22:10.23:0,10,67	0/1:28,0:26:1.72:2,0,78	1/1:12,15:32:46.23:559,46,0	0/0:20,0:20:14.76:0,15,260	0/0:12,0:15:35.01:0,35,255	0/0:17,0:17:20.45:0,20,158	0/0:14,0:16:35.34:0,35,270	0/0:21,0:22:35.38:0,35,285	0/1:17,1:22:30.75:31,0,208	0/0:15,0:15:26.50:0,26,212	0/0:15,0:17:26.22:0,26,199	0/0:12,0:14:23.02:0,23,164	1/1:12,9:35:43.63:424,44,0	0/0:18,0:19:17.64:0,18,191	0/0:23,0:25:47.33:0,47,387	0/0:17,0:20:17.62:0,18,259	1/1:9,6:17:15.46:263,15,0	1/1:12,5:32:56.70:472,57,0	1/1:7,1:15:11.94:77,12,0	0/0:19,0:21:25.47:0,25,222	0/0:24,0:25:27.69:0,28,276	0/0:15,0:18:38.63:0,39,313	1/1:5,9:16:25.21:266,25,0	1/1:14,20:35:15.77:547,16,0	1/1:9,15:29:11.49:231,11,0	0/0:7,0:10:14.36:0,14,128
chr10	96206656	.	ATTAGGT	A	15693.52	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=19.075;DP=702;FS=0.000;HRun=0;HaplotypeScore=158.4187;InbreedingCoeff=0.9950;MQ=87.92;MQ0=0;MQRankSum=-19.193;QD=66.78;ReadPosRankSum=0.408;VQSLOD=4.9691;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.30:0,87,3141	1/1:0,9:9:27.09:686,27,0	0/0:32,0:32:96.31:0,96,3374	0/0:27,0:27:81.28:0,81,2793	1/1:0,36:36:84.18:2009,84,0	0/0:25,0:25:75.26:0,75,2697	0/0:19,0:19:57.20:0,57,2146	0/0:24,0:24:72.24:0,72,2499	0/0:28,0:28:84.29:0,84,3163	0/0:31,0:31:93.31:0,93,3305	0/0:22,0:22:66.23:0,66,2412	0/0:36,0:36:99:0,108,4016	0/0:32,0:32:96.33:0,96,3476	0/0:31,0:31:93.32:0,93,3403	1/1:0,19:19:57.19:1399,57,0	0/0:34,0:34:99:0,102,3656	0/0:17,0:17:51.18:0,51,1849	0/0:12,0:12:36.12:0,36,1338	1/1:0,19:19:57.18:1318,57,0	1/1:0,26:26:69.24:1700,69,0	1/1:0,18:18:39.13:862,39,0	0/0:22,0:22:66.23:0,66,2473	0/0:19,0:19:57.20:0,57,2146	0/0:21,0:21:63.22:0,63,2370	1/1:0,27:27:75.26:1848,75,0	1/1:0,35:35:99:2663,105,0	1/1:0,46:46:99:3209,126,0	0/0:6,0:6:12.04:0,12,452
chr10	96207543	.	TA	T	2796.90	PASS	AC=22;AF=0.407;AN=54;BaseQRankSum=8.959;DP=502;FS=1.263;HRun=12;HaplotypeScore=49.1452;InbreedingCoeff=0.9665;MQ=68.66;MQ0=0;MQRankSum=1.453;QD=13.64;ReadPosRankSum=3.375;VQSLOD=3.9028;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:11:26.89:209,27,0	1/1:3,6:9:17.92:139,18,0	0/0:11,0:11:14.66:0,15,106	./.	1/1:9,16:26:34.83:261,35,0	0/0:18,1:19:27.49:0,27,409	0/0:11,0:12:29.89:0,30,288	0/0:29,0:29:68.48:0,68,670	0/0:18,2:20:24.81:0,25,416	0/0:28,0:28:63.08:0,63,626	0/0:14,1:15:12.52:0,13,287	0/0:11,2:13:3.81:0,4,214	0/0:20,1:21:51.09:0,51,510	0/0:18,2:20:18.83:0,19,362	1/1:8,14:22:38.81:302,39,0	1/1:0,13:13:23.91:186,24,0	0/0:17,1:18:27.87:0,28,463	0/0:11,0:11:26.94:0,27,234	1/1:6,7:16:26.80:167,27,0	1/1:5,22:27:56.61:432,57,0	1/1:1,8:9:20.92:163,21,0	0/0:30,0:29:72.11:0,72,721	0/0:21,0:21:47.97:0,48,457	0/0:10,0:10:24.05:0,24,244	1/1:1,16:17:41.79:320,42,0	1/1:8,25:34:45.48:513,45,0	1/1:5,16:21:41.81:325,42,0	0/0:15,0:15:39.05:0,39,386
chr10	96207846	.	C	CAAA	3962.66	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=2.448;DP=498;FS=7.790;HRun=15;HaplotypeScore=112.0767;InbreedingCoeff=0.6692;MQ=48.80;MQ0=4;MQRankSum=-4.187;QD=8.88;ReadPosRankSum=-3.601;VQSLOD=-0.3947;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,2:28:30.10:417,30,0	1/1:7,0:6:7.12:45,7,0	0/1:5,0:2:0:0,0,0	0/0:6,0:4:3.70:0,4,12	1/1:29,0:24:21.74:116,22,0	1/1:11,0:12:22.69:183,23,0	1/1:11,1:13:25.17:234,25,0	1/1:24,1:27:33.94:327,34,0	1/1:7,10:18:11.52:156,12,0	1/1:8,9:18:20.98:255,21,0	1/1:13,2:16:26.40:272,26,0	1/1:19,3:21:28.55:238,29,0	1/1:19,1:18:32.75:295,33,0	1/1:4,6:12:9.01:122,9,0	0/1:14,0:11:0:0,0,0	1/1:13,2:17:33.43:312,33,0	0/0:19,0:22:31.20:0,31,357	0/0:22,0:23:7.06:0,7,334	1/1:20,0:15:13.40:69,13,0	1/1:31,0:29:24.03:100,24,0	1/1:3,0:3:2.96:19,3,0	1/1:6,2:12:19.20:167,19,0	1/1:9,1:11:16.04:150,16,0	1/1:6,2:10:5.97:48,6,0	1/1:17,0:16:15.48:47,15,0	1/1:33,0:33:45.79:219,46,0	1/1:29,0:25:6.73:38,7,0	1/1:7,4:11:9.03:136,9,0
chr10	96212118	.	TTAC	T	8600.69	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=16.169;DP=588;FS=5.926;HRun=0;HaplotypeScore=81.6787;InbreedingCoeff=0.9927;MQ=86.17;MQ0=0;MQRankSum=-6.666;QD=43.88;ReadPosRankSum=1.199;VQSLOD=5.9684;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.22:0,63,1436	1/1:0,9:9:24.08:409,24,0	0/0:23,0:23:65.99:0,66,1275	0/0:16,0:16:16.52:0,17,926	1/1:1,24:25:59.93:887,60,0	0/0:24,0:23:66.21:0,66,1446	0/0:14,0:14:42.12:0,42,845	0/0:22,0:22:63.20:0,63,1338	0/0:21,0:21:57.20:0,57,1314	0/0:30,0:30:90.31:0,90,2063	0/0:28,0:28:84.29:0,84,1920	0/0:24,0:24:72.23:0,72,1581	0/0:17,0:17:45.15:0,45,1037	0/0:24,0:24:66.23:0,66,1522	1/1:0,21:21:51.09:807,51,0	0/0:19,0:19:54.19:0,54,1228	0/0:21,0:21:63.22:0,63,1392	0/0:19,0:19:48.16:0,48,995	1/1:0,23:23:69.22:1112,69,0	1/1:0,33:33:96.23:1572,96,0	1/1:0,6:6:12.04:205,12,0	0/0:16,0:16:45.15:0,45,1003	0/0:28,0:28:78.22:0,78,1698	0/0:10,0:10:24.07:0,24,509	1/1:0,19:19:48.16:818,48,0	1/1:2,40:42:54.20:1925,54,0	1/1:0,18:18:51.17:866,51,0	0/0:14,0:14:33.11:0,33,760
chr10	96212212	.	T	TC	10069.97	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-15.648;DP=537;FS=0.000;HRun=2;HaplotypeScore=50.5858;InbreedingCoeff=0.9696;MQ=72.04;MQ0=0;MQRankSum=-1.477;QD=36.75;ReadPosRankSum=2.487;VQSLOD=5.2147;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:54.18:777,54,0	0/0:10,0:10:30.01:0,30,351	0/0:17,0:13:31.56:0,32,269	0/0:7,0:7:2.21:0,2,93	0/0:25,0:25:72.06:0,72,837	1/1:1,22:23:53.97:747,54,0	1/1:0,10:10:27.09:389,27,0	1/1:1,19:20:57.16:769,57,0	1/1:0,11:11:24.08:346,24,0	1/1:0,29:29:87.27:1231,87,0	1/1:1,29:30:75.18:1044,75,0	1/1:1,16:17:45.15:648,45,0	1/1:3,11:14:36.11:495,36,0	1/1:1,17:18:45.15:639,45,0	0/0:14,0:14:39.12:0,39,483	1/1:0,14:14:33.11:475,33,0	0/0:26,0:26:75.22:0,75,912	0/0:20,0:19:57.17:0,57,693	0/0:23,0:23:66.20:0,66,808	0/0:28,0:28:78.18:0,78,935	0/0:7,0:7:21.07:0,21,260	1/1:1,20:21:57.19:801,57,0	1/1:1,25:26:69.23:983,69,0	1/1:1,5:6:15.05:216,15,0	0/0:31,0:31:81.23:0,81,990	0/0:28,1:29:41.05:0,41,949	0/0:26,0:26:78.25:0,78,966	1/1:0,13:13:39.01:512,39,0
chr10	96212884	.	GAACA	G	1269.78	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.049;DP=633;FS=9.070;HRun=0;HaplotypeScore=105.9624;InbreedingCoeff=0.9990;MQ=73.85;MQ0=1;MQRankSum=-2.018;QD=38.48;ReadPosRankSum=-1.576;VQSLOD=3.2596;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.20:0,63,1506	0/0:11,0:11:30.10:0,30,705	0/0:26,0:24:50.85:0,51,1009	0/0:29,0:29:42.75:0,43,1378	0/0:37,0:37:90.30:0,90,2164	0/0:34,0:34:84.29:0,84,2037	0/0:20,0:20:50.84:0,51,1146	1/1:4,18:22:54.16:866,54,0	0/0:16,0:16:48.16:0,48,1223	0/0:25,0:25:66.22:0,66,1619	0/0:30,0:30:78.27:0,78,1848	0/0:16,0:16:39.13:0,39,939	0/0:17,0:17:42.13:0,42,1003	0/0:21,0:21:54.19:0,54,1334	0/0:19,0:19:54.19:0,54,1321	0/0:27,0:27:72.16:0,72,1617	0/0:23,0:23:60.21:0,60,1500	0/0:25,0:25:66.20:0,66,1575	0/0:15,0:15:33.06:0,33,748	0/0:30,0:30:66.22:0,66,1591	0/0:15,0:15:33.07:0,33,683	0/0:23,0:23:63.22:0,63,1571	0/0:20,0:20:57.17:0,57,1308	0/0:16,0:16:33.11:0,33,807	0/0:26,0:26:72.25:0,72,1791	0/0:27,0:27:72.25:0,72,1768	0/0:29,0:29:63.22:0,63,1603	1/1:1,10:11:30.10:525,30,0
chr10	96212980	.	AAAAACAAAAC	A	14805	PASS	AC=36;AF=0.692;AN=52;BaseQRankSum=8.914;DP=430;FS=12.161;HRun=0;HaplotypeScore=175.2299;InbreedingCoeff=0.9463;MQ=63.83;MQ0=3;MQRankSum=-7.533;QD=53.64;ReadPosRankSum=2.839;VQSLOD=3.8039;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:12.04:0,12,607	1/1:3,6:9:18.06:552,18,0	0/0:28,0:18:24.08:0,24,895	0/0:27,0:22:36.74:0,37,1119	1/1:10,17:27:45.15:1381,45,0	1/1:2,14:16:42.14:1287,42,0	1/1:4,6:10:18.06:552,18,0	0/0:25,0:25:53.77:0,54,2357	1/1:6,7:13:21.07:641,21,0	1/1:8,4:12:12.04:368,12,0	1/1:6,6:12:15.05:458,15,0	1/1:4,3:7:6.02:184,6,0	1/1:6,10:16:30.10:920,30,0	1/1:4,11:15:30.10:920,30,0	1/1:1,9:10:27.09:828,27,0	0/0:17,0:17:30.10:0,30,1467	0/0:21,0:21:39.12:0,39,1672	0/0:15,0:15:33.11:0,33,1439	1/1:9,2:11:6.02:184,6,0	1/1:13,12:25:30.10:919,30,0	./.	1/1:8,9:17:27.09:828,27,0	1/1:4,12:16:36.12:1105,36,0	./.	1/1:4,17:21:45.15:1380,45,0	1/1:1,15:16:45.15:1378,45,0	1/1:11,12:23:30.10:920,30,0	0/0:8,0:8:24.08:0,24,1216
chr10	96213172	.	C	CCAA	2445.02	PASS	AB=0.893;AC=28;AF=0.500;AN=56;BaseQRankSum=-1.745;DP=360;FS=46.100;HRun=0;HaplotypeScore=156.4508;InbreedingCoeff=-0.3520;MQ=42.49;MQ0=1;MQRankSum=0.871;QD=7.91;ReadPosRankSum=-4.864;VQSLOD=0.0564;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:8:15.08:0,15,89	0/1:9,1:11:29.16:77,0,29	0/1:7,0:5:21.59:22,0,24	0/1:4,0:2:0.97:1,0,16	0/1:17,9:25:43.18:248,0,43	0/1:12,0:11:8.65:101,0,9	1/1:9,0:11:20.01:158,20,0	0/1:14,1:21:75.90:96,0,76	0/1:5,0:5:7.46:16,0,7	0/1:21,0:21:29.47:288,0,29	0/1:24,0:23:13.87:223,0,14	0/1:8,0:7:7.01:24,0,7	0/1:5,0:3:7.67:29,0,8	1/1:4,0:5:8.20:67,8,0	0/1:10,1:13:56.97:57,0,84	0/0:10,0:13:6.94:0,7,115	0/0:14,0:14:20.75:0,21,242	0/0:15,0:16:29.95:0,30,282	0/1:8,0:8:5.74:124,0,6	0/1:28,3:30:74.13:302,0,74	0/1:1,0:1:0:0,0,0	0/1:11,0:14:40.44:150,0,40	1/1:15,0:16:4.79:198,5,0	1/1:3,0:2:1.25:3,1,0	0/1:15,1:16:50.24:181,0,50	0/1:12,1:16:93.33:127,0,93	0/1:16,0:15:58.42:58,0,94	0/1:3,3:6:16.20:51,0,16
chr10	96213641	.	T	TAAATCTGG	11464.54	PASS	AB=0.833;AC=53;AF=0.981;AN=54;BaseQRankSum=-0.689;DP=229;FS=6.480;HRun=0;HaplotypeScore=307.0246;InbreedingCoeff=-0.0617;MQ=59.50;MQ0=0;MQRankSum=-2.186;QD=51.88;ReadPosRankSum=0.119;VQSLOD=3.8210;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:12.04:208,12,0	1/1:6,0:6:12.04:296,12,0	1/1:1,1:5:15.05:333,15,0	0/1:4,0:5:13.95:192,0,14	1/1:13,0:13:18.02:333,18,0	1/1:17,0:17:33.11:831,33,0	1/1:3,0:3:6.02:159,6,0	1/1:8,0:9:24.08:852,24,0	1/1:8,0:8:18.06:549,18,0	1/1:15,0:15:30.10:799,30,0	1/1:17,0:17:30.09:557,30,0	1/1:10,0:10:15.05:453,15,0	1/1:8,0:8:18.06:639,18,0	1/1:6,0:6:18.06:582,18,0	1/1:9,0:9:24.07:604,24,0	1/1:6,0:6:14.78:323,15,0	1/1:9,0:9:8.99:212,9,0	1/1:3,0:3:3.01:96,3,0	1/1:6,0:6:15.04:372,15,0	1/1:12,0:12:30.06:723,30,0	1/1:1,0:1:3.01:40,3,0	1/1:10,0:10:21.07:650,21,0	1/1:7,0:7:9.03:224,9,0	1/1:1,0:1:3.01:93,3,0	1/1:15,0:15:33.10:605,33,0	1/1:10,0:10:21.07:684,21,0	./.	1/1:2,0:2:1.29:55,1,0
chr10	96214196	.	C	CTTAG	22540.42	PASS	AB=0.621;AC=47;AF=0.839;AN=56;BaseQRankSum=-7.746;DP=518;FS=5.221;HRun=0;HaplotypeScore=67.6916;InbreedingCoeff=0.8443;MQ=70.38;MQ0=0;MQRankSum=-3.573;QD=48.47;ReadPosRankSum=2.928;VQSLOD=5.2100;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,16:20:45.15:1102,45,0	1/1:2,5:7:6.02:147,6,0	0/0:15,0:15:27.09:0,27,437	0/0:13,0:12:24.08:0,24,383	1/1:5,30:36:84.28:1927,84,0	1/1:4,9:14:27.09:660,27,0	1/1:6,12:18:24.08:590,24,0	1/1:14,19:37:72.18:1355,72,0	1/1:2,10:12:33.11:773,33,0	1/1:6,17:24:57.15:1267,57,0	1/1:4,13:17:33.11:805,33,0	1/1:1,12:13:27.09:663,27,0	1/1:5,11:17:33.11:770,33,0	1/1:3,22:25:54.19:1323,54,0	1/1:4,12:16:36.12:846,36,0	0/1:7,11:18:14.75:634,0,15	0/0:10,0:10:27.09:0,27,426	0/0:15,0:15:42.14:0,42,687	1/1:7,10:18:36.11:733,36,0	1/1:6,16:23:42.14:994,42,0	1/1:2,16:18:42.10:978,42,0	1/1:2,11:13:30.10:733,30,0	1/1:5,13:18:42.14:976,42,0	1/1:3,11:14:30.10:737,30,0	1/1:2,17:19:45.15:1105,45,0	1/1:5,27:33:84.25:1931,84,0	1/1:4,17:21:42.14:977,42,0	1/1:2,7:12:21.07:516,21,0
chr10	96214384	.	C	CA	7865.40	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-11.141;DP=571;FS=0.694;HRun=1;HaplotypeScore=64.6498;InbreedingCoeff=0.9697;MQ=64.78;MQ0=2;MQRankSum=-0.115;QD=37.63;ReadPosRankSum=1.433;VQSLOD=5.3042;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,147,1909	0/0:7,0:7:15.05:0,15,195	0/0:20,0:15:32.43:0,32,458	0/0:16,0:14:21.30:0,21,248	0/0:32,0:32:87.27:0,87,1115	1/1:1,19:20:42.14:629,42,0	1/1:0,23:23:63.21:944,63,0	0/0:38,0:38:99:0,108,1367	1/1:0,20:20:51.17:764,51,0	1/1:0,21:21:63.21:935,63,0	1/1:0,18:18:48.13:695,48,0	1/1:0,10:10:23.92:350,24,0	1/1:1,23:24:57.19:854,57,0	1/1:0,25:25:66.22:989,66,0	0/0:21,0:21:63.19:0,63,802	0/0:20,0:20:60.20:0,60,779	0/0:19,0:19:54.17:0,54,698	0/0:17,0:17:45.12:0,45,566	0/0:20,0:20:60.19:0,60,779	0/0:20,0:20:48.14:0,48,608	0/0:31,0:31:90.28:0,90,1155	1/1:0,12:12:36.08:515,36,0	1/1:0,8:8:15.05:213,15,0	1/1:1,27:28:66.22:978,66,0	0/0:16,0:16:36.12:0,36,467	0/0:16,0:16:48.16:0,48,623	0/0:18,0:18:51.15:0,51,647	0/0:1,0:1:3.01:0,3,39
chr10	96214509	.	A	ATATT	10519.57	PASS	AB=0.958;AC=19;AF=0.339;AN=56;BaseQRankSum=-7.514;DP=615;FS=17.231;HRun=0;HaplotypeScore=116.9105;InbreedingCoeff=0.9215;MQ=70.15;MQ0=0;MQRankSum=-4.874;QD=45.74;ReadPosRankSum=-0.444;VQSLOD=4.4798;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,99,1655	1/1:5,5:9:21.03:471,21,0	0/0:14,0:14:27.05:0,27,373	0/0:13,0:13:27.43:0,27,410	1/1:11,21:31:69.14:1460,69,0	0/0:20,0:20:45.15:0,45,773	0/0:14,0:13:30.10:0,30,494	0/0:34,0:34:72.19:0,72,1114	0/0:26,0:26:51.17:0,51,871	0/0:28,0:28:72.24:0,72,1206	0/0:25,0:25:63.21:0,63,1049	0/0:16,0:16:42.14:0,42,697	0/0:18,0:18:48.16:0,48,788	0/0:26,0:26:63.18:0,63,1024	1/1:11,11:22:45.11:1023,45,0	0/1:22,1:23:14.94:15,0,915	0/0:23,0:23:57.19:0,57,968	0/0:26,0:24:66.23:0,66,1128	1/1:12,7:18:36.09:727,36,0	1/1:8,17:25:66.17:1483,66,0	1/1:8,11:19:39.12:920,39,0	0/0:15,0:15:36.11:0,36,584	0/0:20,0:20:42.14:0,42,721	0/0:13,0:13:33.11:0,33,566	1/1:14,18:32:75.22:1744,75,0	1/1:8,11:19:48.12:1029,48,0	1/1:5,24:29:66.23:1647,66,0	0/0:14,0:14:27.09:0,27,464
chr10	96216541	.	C	CCAT	1168.56	PASS	AB=0.976;AC=9;AF=0.161;AN=56;BaseQRankSum=8.658;DP=780;FS=1.673;HRun=0;HaplotypeScore=223.5888;InbreedingCoeff=0.0421;MQ=57.06;MQ0=19;MQRankSum=-2.399;QD=5.10;ReadPosRankSum=-5.123;VQSLOD=1.8235;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:64.08:0,64,923	0/1:19,0:19:60.90:61,0,132	0/0:31,0:21:53.52:0,54,832	0/0:25,0:17:45.15:0,45,703	0/1:32,0:31:99:118,0,322	0/0:31,0:31:74.20:0,74,1267	0/0:25,0:25:47.65:0,48,747	0/0:35,0:33:77.88:0,78,1011	0/0:27,0:27:57.64:0,58,938	0/0:37,0:35:68.69:0,69,1230	0/0:29,0:25:42.13:0,42,779	0/0:25,0:24:50.57:0,51,864	0/0:27,0:27:70.97:0,71,1126	0/0:19,0:17:45.10:0,45,700	0/1:29,2:30:99:280,0,148	0/0:33,0:33:81.18:0,81,1259	0/0:24,0:24:51.13:0,51,804	0/0:18,0:18:38.29:0,38,659	0/1:18,0:17:99:122,0,234	0/1:34,1:35:14.15:14,0,318	0/0:43,0:43:5.88:0,6,91	0/0:27,0:26:29.71:0,30,606	0/0:29,0:28:38.04:0,38,738	0/0:27,0:27:56.69:0,57,929	1/1:21,0:21:9.92:179,10,0	0/1:38,0:37:99:276,0,397	0/1:32,3:35:99:260,0,123	0/0:5,0:4:11.51:0,12,66
chr10	96216552	.	C	CCAT	3924.42	PASS	AB=0.792;AC=10;AF=0.179;AN=56;BaseQRankSum=-0.243;DP=795;FS=10.637;HRun=0;HaplotypeScore=224.1803;InbreedingCoeff=0.0267;MQ=52.27;MQ0=26;MQRankSum=2.361;QD=14.64;ReadPosRankSum=-0.128;VQSLOD=2.2406;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:62.71:0,63,705	0/1:5,13:18:34.64:59,0,35	0/0:26,0:16:36.07:0,36,496	0/0:22,0:12:33.11:0,33,498	1/1:34,0:33:15.87:617,16,0	0/0:31,0:31:38.62:0,39,502	0/0:24,0:22:41.86:0,42,406	0/0:34,0:31:77.86:0,78,774	0/0:31,0:30:6.77:0,7,414	0/0:36,0:34:46.69:0,47,631	0/0:31,0:27:40:0,40,425	0/1:21,0:20:23.75:24,0,333	0/0:24,0:24:32.42:0,32,473	0/0:20,0:18:45.72:0,46,348	0/1:31,0:30:69.78:971,0,70	0/0:32,0:32:83.73:0,84,751	0/1:28,0:28:0.93:1,0,686	0/0:16,0:16:42.14:0,42,667	0/1:22,0:21:99:488,0,175	0/1:9,29:38:34.06:616,0,34	0/0:10,36:45:8.65:0,9,136	0/0:31,0:30:41.66:0,42,339	0/0:30,0:29:32.37:0,32,352	0/0:28,0:28:59.57:0,60,597	0/0:11,15:26:19.05:0,19,211	0/1:10,28:37:42.16:1135,0,42	0/1:14,24:38:13.53:14,0,263	0/0:5,0:4:11.70:0,12,112
chr10	96216555	.	TC	T	2312.06	PASS	AB=0.812;AC=6;AF=0.107;AN=56;BaseQRankSum=0.386;DP=780;FS=19.243;HRun=2;HaplotypeScore=211.5450;InbreedingCoeff=-0.1215;MQ=50.92;MQ0=28;MQRankSum=5.023;QD=13.21;ReadPosRankSum=1.988;VQSLOD=1.1296;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:69.79:0,70,1012	0/1:15,0:15:29.33:29,0,78	0/0:23,0:13:37.89:0,38,491	0/0:21,0:11:33.11:0,33,483	0/1:13,22:34:50.70:372,0,51	0/0:30,0:30:81.25:0,81,1166	0/0:25,0:22:43.70:0,44,621	0/0:33,0:29:84.20:0,84,1165	0/0:30,0:29:72.23:0,72,1038	0/0:35,0:33:93.27:0,93,1332	0/0:31,0:27:50.20:0,50,690	0/0:19,0:18:51.16:0,51,713	0/0:23,0:23:60.06:0,60,826	0/0:20,0:18:51.16:0,51,740	0/1:11,19:30:99:555,0,299	0/0:31,0:31:87.27:0,87,1260	0/0:27,0:27:57.16:0,57,739	0/0:16,0:16:44.98:0,45,630	0/1:10,12:21:99:346,0,321	0/1:36,0:36:99:399,0,101	0/0:46,0:45:15.05:0,15,219	0/0:32,0:31:56.84:0,57,768	0/0:29,0:28:46.41:0,46,678	0/0:27,1:28:62.95:0,63,922	0/0:25,0:26:25.33:0,25,361	0/1:37,0:36:99:735,0,181	0/0:38,0:38:30.55:0,31,461	0/0:6,0:5:14.75:0,15,160
chr10	96216565	.	CATCT	C	1647.69	PASS	AB=1.000;AC=32;AF=0.640;AN=50;BaseQRankSum=-8.078;DP=750;FS=0.606;HRun=0;HaplotypeScore=243.4408;InbreedingCoeff=-0.5614;MQ=47.37;MQ0=30;MQRankSum=3.565;QD=2.39;ReadPosRankSum=-8.620;VQSLOD=0.2981;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:32:53.16:62,0,53	0/1:18,0:18:27.04:38,0,27	./.	./.	0/1:30,0:29:15.79:16,0,85	0/1:29,0:29:42.80:43,0,96	0/1:27,0:23:10.99:42,0,11	./.	0/1:30,0:29:66.81:67,0,99	0/1:31,0:29:32.27:32,0,86	0/1:28,0:24:15.93:16,0,83	0/1:20,0:19:6.40:6,0,78	0/1:20,0:20:30.98:31,0,32	0/1:22,0:20:23.60:111,0,24	0/1:36,0:35:99:157,0,230	1/1:31,0:31:12.85:104,13,0	1/1:10,18:28:21.96:320,22,0	1/1:13,0:20:3:28,3,0	0/1:21,0:20:66.74:67,0,74	1/1:38,0:38:9.66:164,10,0	0/1:42,0:41:46.42:126,0,46	0/1:32,0:31:14.48:47,0,14	1/1:27,0:26:9.22:67,9,0	1/1:22,0:23:2.37:23,2,0	0/1:27,0:27:5.06:5,0,224	0/1:33,0:32:79.69:80,0,171	0/1:36,0:36:93.50:93,0,371	1/1:5,0:4:5.43:48,5,0
chr10	96216901	.	T	TA	6251.77	PASS	AB=1.000;AC=47;AF=0.870;AN=54;BaseQRankSum=-0.178;DP=501;FS=11.883;HRun=11;HaplotypeScore=83.7530;InbreedingCoeff=0.8063;MQ=63.54;MQ0=0;MQRankSum=-3.916;QD=13.83;ReadPosRankSum=2.454;VQSLOD=3.9750;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:26:31.45:454,31,0	1/1:10,0:10:16.79:77,17,0	0/0:16,0:14:19.80:0,20,164	0/1:9,0:8:2.64:3,0,42	1/1:26,0:26:35.05:223,35,0	1/1:2,14:16:36.07:365,36,0	1/1:3,5:8:12.02:122,12,0	1/1:11,20:31:60.11:602,60,0	1/1:7,15:23:4.11:326,4,0	1/1:4,12:16:30.05:298,30,0	1/1:5,18:20:27.17:399,27,0	1/1:5,5:10:11.66:120,12,0	1/1:7,14:21:30.06:305,30,0	1/1:2,17:19:42.23:452,42,0	1/1:19,0:20:25.22:116,25,0	1/1:3,13:16:12.68:312,13,0	0/0:22,0:22:59.68:0,60,451	0/0:11,0:11:23.86:0,24,181	1/1:13,0:13:9.94:97,10,0	1/1:35,0:35:48.10:285,48,0	1/1:12,0:12:16.59:74,17,0	1/1:3,11:14:27.05:274,27,0	1/1:1,24:24:54.11:548,54,0	1/1:1,4:5:12.02:122,12,0	1/1:23,0:23:47.56:218,48,0	1/1:23,0:23:45.65:216,46,0	1/1:27,0:27:41.64:242,42,0	./.
chr10	96216908	.	A	AAAAAG	12221.76	PASS	AC=18;AF=0.333;AN=54;BaseQRankSum=-14.317;DP=510;FS=1.650;HRun=0;HaplotypeScore=104.4829;InbreedingCoeff=0.9821;MQ=64.43;MQ0=0;MQRankSum=-5.112;QD=58.48;ReadPosRankSum=-1.591;VQSLOD=4.8641;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:56.53:0,57,446	1/1:2,6:8:24.08:638,24,0	0/0:15,0:13:26.24:0,26,452	0/0:10,0:8:11.58:0,12,192	1/1:2,23:25:66.02:1647,66,0	0/0:17,0:17:44.61:0,45,322	0/0:5,0:5:11.87:0,12,81	0/0:29,0:29:71.39:0,71,525	0/0:22,0:22:47.64:0,48,410	0/0:14,0:14:32.70:0,33,235	0/0:23,0:20:47.56:0,48,371	0/0:9,0:9:17.82:0,18,132	0/0:18,0:18:32.46:0,32,229	0/0:19,0:19:47.52:0,48,357	1/1:9,11:22:39.09:946,39,0	0/0:15,0:15:38.64:0,39,307	0/0:25,0:25:66.18:0,66,1141	0/0:11,0:11:27.08:0,27,477	1/1:2,11:18:51.12:1117,51,0	1/1:6,28:38:99:2398,102,0	1/1:2,6:10:15.05:427,15,0	0/0:12,0:12:29.67:0,30,202	0/0:26,0:25:59.16:0,59,409	0/0:5,0:5:14.84:0,15,101	1/1:1,27:28:54.18:1492,54,0	1/1:2,22:25:38.70:1632,39,0	1/1:3,24:35:71.05:1925,71,0	./.
chr10	96217732	.	GCC	G	15160.62	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=16.788;DP=718;FS=0.886;HRun=5;HaplotypeScore=90.1826;InbreedingCoeff=0.9999;MQ=81.31;MQ0=0;MQRankSum=-3.451;QD=38.00;ReadPosRankSum=3.562;VQSLOD=4.2451;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,39:40:99:1596,114,0	0/0:12,0:12:30.10:0,30,550	0/0:23,0:23:63.21:0,63,1114	0/0:19,0:19:45.14:0,45,786	0/0:27,0:27:75.24:0,75,1339	1/1:0,22:22:60.20:840,60,0	1/1:1,30:31:84.28:1176,84,0	1/1:1,29:30:87.28:1199,87,0	1/1:2,24:26:60.20:840,60,0	1/1:1,30:31:87.29:1218,87,0	1/1:3,25:28:75.21:1028,75,0	1/1:1,23:24:63.21:882,63,0	1/1:2,34:36:99:1386,99,0	1/1:0,28:28:84.28:1175,84,0	0/0:29,0:29:87.30:0,87,1589	1/1:2,22:24:57.19:798,57,0	0/0:20,0:20:60.21:0,60,1094	0/0:13,0:13:36.09:0,36,622	0/0:29,0:29:87.29:0,87,1531	0/0:25,0:25:75.26:0,75,1366	0/0:38,0:38:99:0,108,1926	1/1:3,23:26:66.22:924,66,0	1/1:0,17:17:51.17:714,51,0	1/1:0,25:25:66.20:924,66,0	0/0:18,0:18:51.17:0,51,928	0/0:33,0:33:96.33:0,96,1753	0/0:33,0:33:99:0,99,1806	1/1:0,11:11:33.11:462,33,0
chr10	96218459	.	AC	A	11699.98	PASS	AB=0.931;AC=23;AF=0.411;AN=56;BaseQRankSum=15.025;DP=757;FS=9.106;HRun=2;HaplotypeScore=74.2485;InbreedingCoeff=0.9540;MQ=83.39;MQ0=0;MQRankSum=-1.174;QD=34.72;ReadPosRankSum=5.889;VQSLOD=4.6449;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,157,2485	0/0:5,0:5:15.05:0,15,240	0/0:22,0:21:60.18:0,60,911	0/0:22,0:22:57.05:0,57,782	0/0:28,0:28:78.27:0,78,1247	1/1:0,25:25:60.20:839,60,0	1/1:0,22:22:60.20:839,60,0	0/0:36,0:36:99:0,105,1628	1/1:0,37:37:99:1425,102,0	1/1:1,29:30:88.85:1221,89,0	1/1:0,27:27:72.24:1001,72,0	1/1:0,31:31:81.27:1133,81,0	1/1:0,21:21:57.19:796,57,0	1/1:0,30:30:72.24:1006,72,0	0/0:28,0:28:84.27:0,84,1319	0/0:22,0:22:66.23:0,66,1055	0/0:27,0:27:75.26:0,75,1199	0/0:15,0:15:45.15:0,45,719	0/0:15,0:15:45.15:0,45,714	0/0:37,0:37:99:0,111,1745	0/0:42,0:42:99:0,123,1887	1/1:0,26:26:72.24:1006,72,0	1/1:0,30:30:90.30:1259,90,0	1/1:0,31:31:84.16:1174,84,0	0/0:25,0:25:72.25:0,72,1151	0/1:25,2:27:0.53:1,0,1116	0/0:39,0:37:99:0,117,1798	0/0:4,0:4:12.04:0,12,192
chr10	96221610	.	ACACACACACACTCTCTCT	A	11816.03	PASS	AB=0.996;AC=30;AF=0.536;AN=56;BaseQRankSum=6.865;DP=706;FS=23.543;HRun=0;HaplotypeScore=291.6114;InbreedingCoeff=0.2835;MQ=45.25;MQ0=20;MQRankSum=-4.450;QD=21.84;ReadPosRankSum=5.823;VQSLOD=2.1107;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,28:40:10.78:610,11,0	0/0:11,0:11:20:0,20,382	0/0:19,0:6:12.49:0,12,231	0/0:32,0:12:36.06:0,36,863	0/1:36,0:36:99:99,0,331	1/1:28,2:30:9.13:941,9,0	1/1:25,0:25:15.04:473,15,0	0/0:37,0:35:91.55:0,92,1717	1/1:26,1:27:48.16:1639,48,0	1/1:22,0:22:30.12:1207,30,0	0/1:22,1:22:6.91:470,0,7	0/1:26,0:25:24.87:487,0,25	1/1:28,2:29:42.14:1470,42,0	1/1:22,0:22:18.06:575,18,0	0/1:24,0:24:75.25:75,0,91	1/1:8,9:16:18.06:886,18,0	0/0:15,0:15:42.03:0,42,2690	0/0:18,0:17:50.54:0,51,2631	0/1:19,0:19:99:433,0,229	0/1:26,0:26:63.12:63,0,284	0/1:33,0:31:4.22:4,0,126	1/1:17,1:18:18.06:678,18,0	1/1:24,1:25:10.08:1005,10,0	0/1:33,0:33:14.36:108,0,14	0/0:23,0:23:31.39:0,31,545	0/1:31,0:31:99:499,0,725	0/1:32,0:32:92.60:93,0,403	0/0:10,0:10:12.04:0,12,446
chr10	96221612	.	ACACACACACTCTCTCT	A	15295.91	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=9.809;DP=692;FS=7.214;HRun=0;HaplotypeScore=258.4335;InbreedingCoeff=0.4241;MQ=45.73;MQ0=20;MQRankSum=-7.131;QD=27.96;ReadPosRankSum=8.261;VQSLOD=2.1537;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:36:13.62:494,14,0	0/0:11,0:11:11.10:0,11,205	0/0:17,0:4:9.03:0,9,160	0/0:34,0:14:33.55:0,34,847	0/1:34,0:34:99:146,0,186	1/1:4,26:30:30.10:1341,30,0	1/1:3,21:24:15.05:705,15,0	0/0:39,0:37:87.82:0,88,1275	1/1:3,24:27:48.16:2221,48,0	1/1:2,21:23:48.11:1566,48,0	1/1:4,20:23:15.05:593,15,0	1/1:2,22:23:18.06:781,18,0	1/1:4,25:28:42.14:1848,42,0	1/1:2,21:23:18.06:854,18,0	1/1:24,0:24:22.86:204,23,0	1/1:14,0:13:18.06:714,18,0	0/0:16,0:16:44.94:0,45,2523	0/0:18,0:17:49.98:0,50,2358	0/1:17,0:17:75.73:511,0,76	0/1:26,0:26:99:121,0,123	0/1:32,0:30:18.54:19,0,66	1/1:5,14:18:18.06:808,18,0	1/1:2,24:26:30.20:1412,30,0	1/1:5,26:31:2.65:143,3,0	0/1:23,0:23:8.12:8,0,269	0/1:31,0:31:99:616,0,437	0/1:29,0:29:99:192,0,137	0/0:10,0:10:12.04:0,12,351
chr10	96221616	.	ACACACTCTCTCT	A	14539.60	PASS	AB=0.979;AC=42;AF=0.750;AN=56;BaseQRankSum=10.601;DP=674;FS=5.282;HRun=0;HaplotypeScore=227.6087;InbreedingCoeff=0.5316;MQ=46.65;MQ0=20;MQRankSum=-7.044;QD=25.11;ReadPosRankSum=7.571;VQSLOD=2.4278;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:35:12.04:364,12,0	0/1:9,0:9:9.19:84,0,9	0/0:20,0:5:15.02:0,15,438	0/0:29,0:15:42.58:0,43,1118	1/1:30,3:33:2.02:433,2,0	1/1:29,0:29:30.10:889,30,0	1/1:24,0:24:15.05:464,15,0	0/1:39,0:37:34.87:35,0,422	1/1:27,0:27:48.16:1491,48,0	1/1:22,0:22:48.11:1187,48,0	1/1:23,0:22:15.05:421,15,0	1/1:23,0:22:18.06:502,18,0	1/1:29,0:28:42.14:1248,42,0	1/1:22,0:22:18.06:564,18,0	1/1:22,2:24:33.11:713,33,0	1/1:14,0:13:18.06:546,18,0	0/0:17,0:17:47.79:0,48,2065	0/0:18,0:17:45.99:0,46,1897	1/1:7,10:17:19.88:792,20,0	1/1:23,4:27:5.18:532,5,0	0/1:29,0:27:18.40:50,0,18	1/1:18,0:17:18.06:559,18,0	1/1:25,0:25:30.30:949,30,0	1/1:27,0:27:2.75:95,3,0	1/1:21,0:21:20.75:388,21,0	0/1:29,3:32:75.76:1378,0,76	1/1:27,2:29:40.47:855,40,0	0/0:10,0:10:12.04:0,12,181
chr10	96221618	.	ACACTCTCTCT	A	15719.38	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=7.307;DP=660;FS=5.848;HRun=0;HaplotypeScore=206.8808;InbreedingCoeff=0.7451;MQ=47.82;MQ0=20;MQRankSum=-6.732;QD=27.63;ReadPosRankSum=5.633;VQSLOD=3.7207;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:35:12.04:323,12,0	1/1:7,1:8:12.91:238,13,0	0/0:20,0:7:13.78:0,14,542	0/0:28,0:15:42.49:0,42,1093	1/1:8,23:31:27.01:739,27,0	1/1:29,0:29:30.02:746,30,0	1/1:24,0:24:15.05:396,15,0	0/1:37,0:35:99:106,0,244	1/1:27,0:27:48.16:1282,48,0	1/1:22,0:22:48.04:1078,48,0	1/1:23,0:22:15.05:367,15,0	1/1:23,0:22:17.98:418,18,0	1/1:29,0:28:42.06:1067,42,0	1/1:22,0:22:18.06:483,18,0	1/1:2,23:25:33.11:1036,33,0	1/1:14,0:13:18.06:479,18,0	0/0:16,0:16:41.72:0,42,1786	0/0:17,0:16:42.57:0,43,1650	1/1:15,2:17:37.76:845,38,0	1/1:7,19:26:29.77:857,30,0	1/1:10,19:27:2.58:101,3,0	1/1:18,0:17:18.06:475,18,0	1/1:25,0:25:29.70:809,30,0	1/1:27,0:27:2.88:81,3,0	1/1:2,15:17:20.76:707,21,0	1/1:5,26:31:4.92:1857,5,0	1/1:4,25:29:45.32:1231,45,0	0/0:1,0:10:6.75:0,7,76
chr10	96221620	.	ACTCT	A	6034.92	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=9.735;DP=650;FS=8.190;HRun=0;HaplotypeScore=201.5450;InbreedingCoeff=0.8463;MQ=48.34;MQ0=17;MQRankSum=-6.632;QD=10.51;ReadPosRankSum=5.094;VQSLOD=3.3003;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:35:12.01:112,12,0	1/1:3,0:8:9.01:84,9,0	0/0:19,0:7:13.57:0,14,284	0/0:23,0:16:29.62:0,30,519	1/1:30,0:31:24.03:240,24,0	1/1:28,0:29:27.03:252,27,0	1/1:24,0:24:15.02:144,15,0	1/1:17,17:32:32.45:679,32,0	1/1:26,0:27:48.06:456,48,0	1/1:21,0:22:39.06:399,39,0	1/1:23,0:22:14.98:138,15,0	1/1:23,0:22:15.02:141,15,0	1/1:28,0:28:39.05:368,39,0	1/1:22,0:22:18.02:170,18,0	1/1:25,0:25:33.05:322,33,0	1/1:13,0:13:18.02:168,18,0	0/0:17,0:17:47.76:0,48,960	0/0:17,0:16:38.80:0,39,737	1/1:17,0:17:30.08:335,30,0	1/1:26,0:26:27.04:259,27,0	1/1:27,0:25:2.74:28,3,0	1/1:18,0:17:18.02:169,18,0	1/1:25,0:25:29.45:279,29,0	1/1:27,0:27:3:28,3,0	1/1:17,0:17:20.76:196,21,0	1/1:31,0:31:23.46:588,23,0	1/1:28,0:29:39.04:362,39,0	1/1:10,0:10:8.94:119,9,0
chr10	96222565	.	G	GTA	1515.67	PASS	AB=1.000;AC=26;AF=0.500;AN=52;BaseQRankSum=-1.449;DP=374;FS=7.267;HRun=0;HaplotypeScore=58.8529;InbreedingCoeff=0.2903;MQ=42.95;MQ0=10;MQRankSum=5.273;QD=7.02;ReadPosRankSum=1.041;VQSLOD=1.9966;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:15:2.66:145,3,0	0/0:7,0:7:8.93:0,9,65	./.	0/0:14,0:7:14.72:0,15,165	./.	0/0:9,14:22:2.37:0,2,9	1/1:15,0:14:4.62:166,5,0	0/1:26,0:24:99:177,0,110	1/1:9,0:9:11.57:99,12,0	0/1:16,0:16:8.25:137,0,8	1/1:7,0:7:11.98:121,12,0	1/1:14,0:14:15.85:165,16,0	0/1:6,0:6:7.10:38,0,7	1/1:16,0:16:11.29:58,11,0	0/0:22,0:21:14.85:0,15,104	1/1:18,0:16:26.97:276,27,0	0/0:14,0:14:20.92:0,21,135	0/1:14,0:14:11.99:12,0,177	0/0:21,0:21:11.53:0,12,266	0/0:8,0:7:5.95:0,6,43	0/1:10,0:8:12.64:25,0,13	0/1:9,0:9:5.54:19,0,6	1/1:10,0:9:14.94:118,15,0	1/1:10,0:10:2.66:24,3,0	0/0:11,0:11:14.16:0,14,115	0/0:16,0:16:23.38:0,23,178	0/1:16,0:16:21.71:22,0,84	0/1:4,0:4:6.53:89,0,7
chr10	96222567	.	G	GTA	369.02	PASS	AB=1.000;AC=12;AF=0.231;AN=52;BaseQRankSum=-1.705;DP=354;FS=13.462;HRun=0;HaplotypeScore=62.2299;InbreedingCoeff=0.2147;MQ=39.71;MQ0=10;MQRankSum=0.612;QD=3.10;ReadPosRankSum=0.961;VQSLOD=0.6592;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:11.18:0,11,56	0/1:7,0:7:14.14:25,0,14	./.	0/0:12,0:5:7.52:0,8,90	./.	0/0:21,0:20:1.57:0,2,5	0/0:14,0:13:16.98:0,17,75	0/0:23,0:21:8.40:0,8,184	0/0:9,0:9:10.78:0,11,44	0/0:15,0:15:35.97:0,36,180	0/0:7,0:7:6.09:0,6,33	0/0:14,0:14:15.14:0,15,85	0/0:6,0:6:11.32:0,11,41	0/0:15,0:15:8.18:0,8,49	1/1:22,0:21:11.92:91,12,0	0/0:18,0:16:13.24:0,13,57	0/0:14,0:14:18.44:0,18,120	0/1:13,0:13:1.05:1,0,173	0/1:20,0:20:99:127,0,105	1/1:8,0:7:5.97:46,6,0	0/1:10,0:8:11.63:12,0,26	0/0:9,0:9:5.65:0,6,32	0/0:10,0:9:12.85:0,13,49	0/0:9,0:9:2.53:0,3,12	1/1:11,0:11:14.54:121,15,0	0/1:14,0:14:32.15:32,0,79	0/1:14,0:14:25.48:61,0,25	0/0:4,0:4:2.76:0,3,35
chr10	96222819	.	C	CTG	45.63	PASS	AC=10;AF=0.833;AN=12;BaseQRankSum=-0.742;DP=39;FS=0.000;HRun=0;HaplotypeScore=34.0759;MQ=76.98;MQ0=0;MQRankSum=-0.742;QD=3.51;ReadPosRankSum=0.742;VQSLOD=1.1792;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,0:2:2.94:18,3,0	1/1:1,0:1:2.99:23,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:5,0:5:8.90:61,9,0	./.	./.	./.	./.	./.	0/0:3,0:3:2.05:0,2,6	1/1:4,0:4:2.84:14,3,0	./.	./.	1/1:1,0:1:0.47:1,0,0
chr10	96222846	.	TA	T	163.29	PASS	AC=14;AF=1.000;AN=14;DP=42;FS=0.000;HRun=1;HaplotypeScore=13.9526;MQ=32.10;MQ0=0;QD=12.56;VQSLOD=1.8199;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,0:2:2.50:9,2,0	./.	./.	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:39,3,0	./.	./.	./.	1/1:0,1:1:0.47:1,0,0	./.	./.	./.	1/1:0,3:3:9.01:105,9,0	./.	./.	./.	./.	./.	./.	1/1:3,1:4:3.01:42,3,0	./.	1/1:0,1:1:0.89:2,1,0	1/1:0,1:1:3.01:34,3,0
chr10	96222847	.	A	AT	133.71	PASS	AC=14;AF=1.000;AN=14;DP=42;FS=0.000;HRun=1;HaplotypeScore=14.1183;MQ=32.10;MQ0=0;QD=10.29;VQSLOD=1.2163;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,2:2:3.01:48,3,0	./.	./.	./.	./.	./.	./.	./.	1/1:1,0:1:3.01:39,3,0	./.	./.	./.	1/1:1,0:1:0.47:1,0,0	./.	./.	./.	1/1:3,0:3:8.21:67,8,0	./.	./.	./.	./.	./.	./.	1/1:1,3:4:3.01:30,3,0	./.	1/1:1,0:1:0.89:2,1,0	1/1:1,0:1:2.88:15,3,0
chr10	96223425	.	T	TAA	647.86	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=2.011;DP=570;FS=8.542;HRun=12;HaplotypeScore=78.9231;InbreedingCoeff=0.5780;MQ=73.08;MQ0=0;MQRankSum=0.155;QD=7.71;ReadPosRankSum=-1.319;VQSLOD=0.3601;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,17:25:15.67:483,16,0	0/0:13,0:13:2.04:0,2,197	0/1:25,0:22:34.21:34,0,62	0/1:24,0:14:9.46:9,0,66	0/0:26,0:28:62.51:0,63,551	0/0:25,0:26:62.93:0,63,630	0/0:12,0:12:29.97:0,30,278	0/0:25,0:27:53.41:0,53,467	0/0:17,0:18:44.75:0,45,401	0/0:27,0:27:62.89:0,63,580	0/0:23,0:24:53.72:0,54,483	0/0:16,0:18:44.49:0,44,384	0/0:22,0:22:44.94:0,45,416	0/0:19,0:19:41.99:0,42,389	0/0:16,0:17:37.99:0,38,358	1/1:3,7:10:18.06:252,18,0	0/0:24,0:25:62.72:0,63,567	0/0:14,0:16:20.75:0,21,241	0/0:22,0:24:32.73:0,33,399	0/0:28,0:30:80.50:0,81,718	0/0:8,0:8:21:0,21,190	0/0:19,0:19:44.93:0,45,404	0/0:9,0:12:29.22:0,29,230	0/0:15,0:16:35.86:0,36,380	0/0:24,0:24:56.92:0,57,527	0/0:25,0:25:50.83:0,51,467	0/0:23,0:24:53.64:0,54,478	0/0:11,0:12:23.93:0,24,222
chr10	96225783	.	G	GTTTC	32035	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-4.571;DP=617;FS=2.340;HRun=0;HaplotypeScore=91.5383;InbreedingCoeff=0.9884;MQ=76.41;MQ0=1;MQRankSum=-6.188;QD=58.78;ReadPosRankSum=2.889;VQSLOD=6.5146;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,34:41:93.32:2356,93,0	1/1:0,10:10:24.08:619,24,0	0/0:22,0:22:42:0,42,696	0/0:11,0:11:12.44:0,12,411	1/1:5,22:28:72.21:1711,72,0	1/1:4,18:22:54.19:1374,54,0	1/1:4,26:31:81.28:2068,81,0	1/1:23,13:38:63.17:1464,63,0	1/1:1,9:10:24.55:620,25,0	1/1:3,19:23:60.21:1514,60,0	1/1:0,11:14:30.10:771,30,0	1/1:3,19:23:57.20:1466,57,0	1/1:1,15:16:42.10:989,42,0	1/1:3,25:28:75.26:1935,75,0	1/1:2,25:25:63.22:1614,63,0	1/1:10,19:30:60.21:1510,60,0	0/0:22,0:22:66.23:0,66,1171	0/0:17,0:17:51.10:0,51,816	1/1:7,11:17:36.07:772,36,0	1/1:4,20:24:66.23:1618,66,0	1/1:1,12:13:30.10:737,30,0	1/1:3,19:24:57.20:1470,57,0	1/1:6,17:24:54.19:1367,54,0	1/1:6,16:22:57.20:1406,57,0	1/1:2,14:16:45.15:1141,45,0	1/1:4,20:25:72.23:1731,72,0	1/1:8,19:27:51.18:1316,51,0	1/1:1,6:7:18.06:465,18,0
chr10	96227740	.	TTAATA	T	16622.68	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=7.090;DP=427;FS=2.011;HRun=0;HaplotypeScore=91.7104;InbreedingCoeff=0.8948;MQ=69.84;MQ0=0;MQRankSum=-5.179;QD=45.29;ReadPosRankSum=3.402;VQSLOD=5.0387;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,6:8:12.04:238,12,0	1/1:3,4:7:9.03:179,9,0	0/0:9,0:9:17.73:0,18,411	0/0:12,0:11:20.86:0,21,569	1/1:7,20:27:51.17:986,51,0	1/1:0,8:8:21.07:417,21,0	1/1:1,4:5:9.03:179,9,0	1/1:6,20:26:60.18:1094,60,0	1/1:0,17:17:45.15:893,45,0	1/1:5,22:27:66.22:1249,66,0	1/1:3,21:24:57.20:1132,57,0	1/1:1,15:16:39.13:774,39,0	1/1:0,11:11:21.07:417,21,0	1/1:2,9:11:27.09:536,27,0	1/1:1,21:22:57.20:1131,57,0	1/1:1,18:19:51.18:1012,51,0	0/0:28,0:27:69.24:0,69,1951	0/0:10,0:10:24.08:0,24,670	1/1:1,12:13:36.12:701,36,0	1/1:3,15:18:45.15:865,45,0	1/1:3,4:7:9.03:179,9,0	1/1:1,12:13:33.11:650,33,0	1/1:2,8:10:18.06:357,18,0	0/0:0,1:1:0:0,0,0	1/1:2,22:24:57.20:1132,57,0	1/1:2,17:19:48.16:952,48,0	1/1:4,23:27:63.22:1250,63,0	1/1:0,8:8:15.05:298,15,0
chr10	96228028	.	G	GTT	3947.76	PASS	AC=28;AF=0.519;AN=54;BaseQRankSum=-7.141;DP=274;FS=15.812;HRun=10;HaplotypeScore=31.8555;InbreedingCoeff=0.8940;MQ=77.25;MQ0=7;MQRankSum=-1.314;QD=29.03;ReadPosRankSum=-0.166;VQSLOD=1.6728;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:14:32.08:420,32,0	0/0:3,0:3:6.01:0,6,61	0/0:13,0:11:10.17:0,10,78	0/0:7,0:6:2.01:0,2,32	0/0:13,0:12:30.06:0,30,305	1/1:1,9:10:20.56:277,21,0	1/1:1,7:9:24.03:317,24,0	1/1:12,9:21:41.62:569,42,0	1/1:2,4:6:12.04:179,12,0	1/1:3,11:15:38.41:514,38,0	1/1:2,2:5:13.90:151,14,0	1/1:4,10:14:27.09:402,27,0	1/1:3,4:7:12.04:179,12,0	1/1:1,3:4:6.02:90,6,0	0/0:12,0:11:30.06:0,30,302	1/1:1,6:7:15.05:224,15,0	0/0:9,0:8:24.05:0,24,244	0/0:13,0:13:30.04:0,30,305	0/0:17,0:17:48.09:0,48,483	0/0:8,0:8:15.03:0,15,153	0/0:10,0:10:11.98:0,12,122	1/1:2,5:7:15.05:223,15,0	1/1:1,3:4:6.02:89,6,0	./.	0/0:8,0:8:21.04:0,21,214	0/0:13,0:12:30.06:0,30,305	0/0:10,0:10:21.01:0,21,214	1/1:2,7:7:21.07:313,21,0
chr10	96228441	.	G	GCT	128.95	PASS	AB=0.948;AC=5;AF=0.167;AN=30;BaseQRankSum=2.889;DP=958;FS=0.000;HRun=0;HaplotypeScore=16.3496;InbreedingCoeff=0.0412;MQ=8.03;MQ0=870;MQRankSum=0.053;QD=1.10;ReadPosRankSum=-1.123;VQSLOD=0.6182;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/0:34,0:8:15.05:0,15,219	0/0:30,0:3:9.03:0,9,132	1/1:27,0:1:3.01:40,3,0	./.	0/1:30,2:4:46.96:47,0,79	0/1:19,1:5:41:41,0,162	./.	0/0:32,0:5:12.04:0,12,176	./.	0/0:33,0:5:15.05:0,15,220	0/0:45,0:3:9.03:0,9,132	0/1:36,2:4:35.06:100,0,35	0/0:41,0:4:12.04:0,12,176	0/0:39,0:1:3.01:0,3,44	./.	./.	./.	0/0:17,0:4:9.03:0,9,131	./.	0/0:19,0:1:3.01:0,3,44	./.	0/0:41,0:10:30.10:0,30,441	0/0:30,1:10:27.02:0,27,370	./.
chr10	96229830	.	GTC	G	3480.45	PASS	AB=0.881;AC=25;AF=0.446;AN=56;BaseQRankSum=-4.031;DP=749;FS=6.389;HRun=0;HaplotypeScore=197.2301;InbreedingCoeff=-0.3630;MQ=44.19;MQ0=23;MQRankSum=-1.603;QD=5.80;ReadPosRankSum=-3.545;VQSLOD=2.1224;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,3:26:24.64:25,0,74	1/1:4,3:6:2.98:38,3,0	0/0:18,0:6:6.04:0,6,54	0/0:38,0:4:5.98:0,6,47	0/1:18,21:36:4.83:206,0,5	0/1:30,0:30:67.90:79,0,68	0/1:38,0:37:63.71:144,0,64	0/1:25,0:21:21.71:111,0,22	0/0:17,0:17:10.75:0,11,84	0/1:25,0:23:41.90:77,0,42	0/0:21,0:21:7.38:0,7,36	0/1:35,0:35:65.30:124,0,65	0/1:24,0:24:92.74:94,0,93	0/1:26,0:26:24.75:67,0,25	1/1:25,13:38:17.46:215,17,0	0/1:28,3:31:22.08:22,0,297	0/0:35,0:35:74.41:0,74,1355	0/0:19,0:19:45.08:0,45,601	0/1:12,14:25:15.93:369,0,16	0/1:13,8:16:14.06:32,0,14	0/1:23,15:37:40.24:269,0,40	0/1:34,0:31:16.57:33,0,17	0/1:15,0:14:14.35:37,0,14	0/1:35,0:35:5.27:52,0,5	0/1:8,6:12:13.16:101,0,13	1/1:13,20:31:53.26:830,53,0	0/1:14,17:31:4.45:540,0,4	0/1:6,0:6:14.96:16,0,15
chr10	96229837	.	T	TCA	306.75	PASS	AB=0.667;AC=3;AF=0.054;AN=56;BaseQRankSum=2.803;DP=734;FS=4.580;HRun=0;HaplotypeScore=218.3036;InbreedingCoeff=0.3897;MQ=43.99;MQ0=20;MQRankSum=-4.896;QD=11.36;ReadPosRankSum=-2.508;VQSLOD=2.5690;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:7.24:0,7,48	0/0:6,0:5:5.92:0,6,39	0/0:21,0:6:8.19:0,8,130	0/0:32,0:5:5.86:0,6,66	0/0:38,0:34:20.51:0,21,138	0/0:29,0:29:44.78:0,45,429	0/0:39,0:37:63.71:0,64,562	1/1:18,5:20:12.72:323,13,0	0/0:16,0:16:23.40:0,23,223	0/0:24,0:22:22.73:0,23,350	0/0:21,0:20:4.87:0,5,76	0/0:34,0:34:36.19:0,36,378	0/0:23,0:23:0.42:0,0,297	0/0:27,0:27:25.44:0,25,213	0/0:42,0:41:27.57:0,28,200	0/0:31,0:31:22.09:0,22,198	0/0:36,0:35:99:0,99,1424	0/0:20,0:20:54.08:0,54,724	0/0:23,0:20:53.23:0,53,388	0/0:23,0:19:26.76:0,27,192	0/0:37,0:37:35.49:0,35,250	0/0:32,0:29:22.70:0,23,166	0/0:15,0:14:13.99:0,14,108	0/0:34,0:34:27.92:0,28,144	0/0:16,0:14:8.65:0,9,57	0/0:36,0:34:88.20:0,88,643	0/0:30,0:28:56.65:0,57,375	0/1:2,2:4:11.09:83,0,11
chr10	96229839	.	T	TCA	4954.26	PASS	AB=0.732;AC=18;AF=0.321;AN=56;BaseQRankSum=-0.643;DP=722;FS=19.348;HRun=0;HaplotypeScore=201.9248;InbreedingCoeff=0.3222;MQ=43.88;MQ0=20;MQRankSum=0.442;QD=15.88;ReadPosRankSum=3.142;VQSLOD=3.3302;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:4.14:0,4,44	0/0:6,0:5:2.96:0,3,19	0/0:21,0:6:8.26:0,8,120	0/0:29,0:5:5.91:0,6,68	0/0:38,0:34:17.60:0,18,114	0/1:15,14:29:15.45:402,0,15	0/1:29,10:37:9.12:439,0,9	1/1:21,0:18:12.44:310,12,0	0/1:9,7:16:21.29:230,0,21	1/1:14,9:21:40.37:598,40,0	0/1:4,16:19:17.52:258,0,18	1/1:18,16:34:28.26:567,28,0	0/1:15,7:22:26.20:314,0,26	1/1:10,17:27:45.07:664,45,0	0/0:43,0:42:21.58:0,22,151	0/0:29,0:29:13.33:0,13,188	0/0:35,0:34:99:0,102,1444	0/0:20,0:20:51.09:0,51,683	0/0:26,0:22:53.38:0,53,391	0/0:22,0:18:23.60:0,24,173	0/0:35,0:35:35.50:0,36,252	0/1:15,14:27:3.37:272,0,3	0/1:8,5:13:22.19:173,0,22	1/1:15,19:34:28.38:644,28,0	0/0:16,0:14:8.12:0,8,56	0/0:37,0:35:94.10:0,94,687	0/0:31,0:29:56.76:0,57,386	0/1:4,0:4:10.90:84,0,11
chr10	96229885	.	C	CGAGAGT	3044.47	PASS	AB=0.975;AC=26;AF=0.481;AN=54;BaseQRankSum=1.790;DP=704;FS=12.926;HRun=0;HaplotypeScore=239.6792;InbreedingCoeff=0.2411;MQ=44.28;MQ0=29;MQRankSum=-5.463;QD=6.74;ReadPosRankSum=2.427;VQSLOD=0.5555;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:20:2.99:0,3,25	0/1:10,0:10:21.47:21,0,23	./.	0/0:24,0:3:0.13:0,0,1	0/0:37,0:33:15.35:0,15,93	1/1:24,0:23:24.99:277,25,0	0/1:34,0:28:12.77:91,0,13	1/1:37,0:35:57.78:642,58,0	1/1:29,2:29:1.66:181,2,0	1/1:25,2:26:21.78:568,22,0	0/1:15,2:16:6.14:145,0,6	1/1:24,0:22:14.56:106,15,0	1/1:23,3:25:10.47:522,10,0	0/1:27,3:27:59.49:171,0,59	0/0:32,0:32:14.55:0,15,154	0/0:20,0:20:7.07:0,7,92	0/0:35,0:35:95.61:0,96,1375	0/0:20,0:20:56.85:0,57,877	0/1:22,0:18:33.30:33,0,101	0/0:23,0:19:5.19:0,5,33	0/1:32,0:29:14.34:14,0,129	1/1:26,2:26:4.41:30,4,0	1/1:19,1:19:7.07:68,7,0	1/1:34,1:35:14.65:152,15,0	0/0:17,0:17:11.02:0,11,60	0/1:31,0:29:99:154,0,143	0/1:24,0:22:45.06:45,0,65	0/0:6,0:4:2.50:0,2,9
chr10	96229895	.	AGC	A	3472.93	PASS	AB=0.920;AC=29;AF=0.518;AN=56;BaseQRankSum=-3.994;DP=715;FS=11.155;HRun=0;HaplotypeScore=196.8348;InbreedingCoeff=-0.1395;MQ=49.44;MQ0=29;MQRankSum=3.960;QD=5.88;ReadPosRankSum=-0.382;VQSLOD=2.1270;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:20:2.51:7,3,0	0/0:14,0:14:5.68:0,6,26	0/1:18,0:3:1.32:1,0,6	0/0:27,0:7:4.17:0,4,28	0/1:32,0:27:1.37:117,0,1	0/1:19,2:20:99:185,0,134	0/1:26,10:30:12.34:252,0,12	0/1:43,0:41:8.58:9,0,229	0/1:20,9:27:33.29:198,0,33	0/1:30,0:28:99:423,0,186	0/1:19,4:21:99:264,0,137	0/1:25,0:23:0.03:0,0,79	0/1:22,6:27:99:263,0,106	0/1:22,9:28:70.14:409,0,70	1/1:29,0:29:16.25:143,16,0	0/1:17,0:17:22.15:22,0,119	0/0:35,0:34:81.12:0,81,1457	0/0:20,0:20:44.71:0,45,886	0/1:21,0:17:9.16:94,0,9	0/1:22,0:19:12.41:16,0,12	1/1:31,0:28:40.89:299,41,0	0/0:28,0:26:12.93:0,13,42	0/1:10,6:15:13.53:126,0,14	0/1:32,0:32:37.11:37,0,79	1/1:23,0:22:0.84:45,1,0	1/1:34,0:32:32.93:410,33,0	1/1:24,0:22:9.53:155,10,0	0/1:4,0:3:0:0,0,0
chr10	96229897	.	C	CGAGA	5258.45	PASS	AB=0.878;AC=43;AF=0.768;AN=56;BaseQRankSum=5.604;DP=716;FS=7.448;HRun=0;HaplotypeScore=205.8683;InbreedingCoeff=0.2686;MQ=50.46;MQ0=28;MQRankSum=-2.273;QD=8.36;ReadPosRankSum=-4.195;VQSLOD=2.6056;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:14,9:25:2.63:12,3,0	1/1:12,0:13:5.45:82,5,0	1/1:19,0:3:2.34:7,2,0	0/0:30,0:8:0.44:0,0,15	1/1:32,0:27:19.33:127,19,0	0/1:18,1:20:15.50:319,0,15	1/1:32,1:27:20.81:279,21,0	0/1:21,0:41:28.33:59,0,28	1/1:23,5:28:29.55:368,30,0	1/1:13,15:28:53.88:805,54,0	0/1:18,2:20:53.84:329,0,54	1/1:12,10:23:8.50:97,8,0	1/1:24,4:27:38.57:553,39,0	1/1:22,6:27:7.18:573,7,0	1/1:23,0:29:26.81:132,27,0	0/1:10,9:20:39.25:39,0,43	0/0:33,0:32:66.24:0,66,1047	0/0:19,0:20:25.71:0,26,648	1/1:22,0:19:23.13:209,23,0	1/1:21,0:20:2.92:18,3,0	1/1:19,0:25:31.97:229,32,0	1/1:28,0:26:3.28:18,3,0	1/1:11,4:14:18.46:298,18,0	1/1:14,16:32:9.09:133,9,0	1/1:21,0:20:4.82:18,5,0	1/1:33,0:32:40.66:403,41,0	0/1:24,0:22:10.61:150,0,11	0/0:0,0:3:3:0,3,28
chr10	96229899	.	A	AGAGC	4939.33	PASS	AB=0.962;AC=39;AF=0.696;AN=56;BaseQRankSum=8.370;DP=730;FS=4.052;HRun=0;HaplotypeScore=209.6392;InbreedingCoeff=0.1285;MQ=52.25;MQ0=30;MQRankSum=-3.105;QD=7.35;ReadPosRankSum=-1.312;VQSLOD=3.3530;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:25:0.55:1,0,1	0/1:4,10:14:8.01:92,0,8	0/1:19,0:3:0.57:1,0,4	0/1:33,0:10:2.65:3,0,37	1/1:13,20:28:23.18:187,23,0	0/1:21,0:20:24.68:150,0,25	0/1:33,0:27:21.57:87,0,22	0/1:41,0:40:45.66:192,0,46	1/1:30,0:28:2.51:204,3,0	1/1:31,0:29:34.39:481,34,0	0/1:23,0:21:86.66:148,0,87	0/1:27,0:25:17.95:50,0,18	1/1:28,0:27:46.31:420,46,0	0/1:29,0:26:1.79:303,0,2	1/1:24,5:29:38.14:322,38,0	0/1:20,0:20:39.62:75,0,40	0/0:33,0:32:55.60:0,56,1312	0/0:21,0:21:11.41:0,11,785	1/1:24,1:19:24.91:307,25,0	1/1:10,14:21:2.84:22,3,0	1/1:25,0:23:31.28:347,31,0	1/1:11,17:28:2.85:18,3,0	1/1:17,0:16:18.38:178,18,0	1/1:30,0:30:6.68:76,7,0	1/1:7,15:21:12.22:83,12,0	1/1:15,19:33:73.35:798,73,0	1/1:14,10:22:21.65:397,22,0	0/0:4,0:3:2.84:0,3,14
chr10	96229901	.	A	AGC	2312.77	PASS	AB=0.981;AC=24;AF=0.429;AN=56;BaseQRankSum=7.263;DP=734;FS=6.015;HRun=0;HaplotypeScore=200.3241;InbreedingCoeff=-0.4163;MQ=52.44;MQ0=30;MQRankSum=-7.180;QD=3.90;ReadPosRankSum=0.584;VQSLOD=2.1138;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:26:16.67:17,0,18	0/1:15,1:16:47.92:89,0,48	0/1:19,0:3:2.79:3,0,28	0/0:34,0:11:8.75:0,9,52	0/1:31,2:28:8.02:149,0,8	0/1:22,0:21:37.22:37,0,141	0/0:32,0:26:23.45:0,23,171	0/1:41,0:40:5.88:501,0,6	0/1:30,0:28:19.36:19,0,100	0/1:31,0:29:95.72:96,0,210	0/1:24,1:23:69.87:70,0,233	0/1:26,0:24:32.36:32,0,45	0/1:27,0:26:99:159,0,120	0/1:28,0:25:44.78:45,0,231	0/1:28,3:31:45.88:247,0,46	0/1:20,0:20:45.39:45,0,64	0/0:32,0:31:89.98:0,90,1252	0/0:20,1:21:9.45:0,9,730	0/1:25,0:19:88.41:88,0,97	0/1:23,1:21:45.28:45,0,59	0/1:25,1:23:57.42:57,0,64	0/1:28,1:27:6.53:7,0,18	0/0:18,0:17:7.61:0,8,124	0/1:28,0:28:6.23:18,0,6	1/1:21,2:22:11.98:157,12,0	0/1:37,1:35:58.75:289,0,59	1/1:22,1:22:21.02:300,21,0	0/0:4,0:3:0:0,0,0
chr10	96231068	.	C	CAAAA	9204.39	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-7.919;DP=470;FS=1.294;HRun=10;HaplotypeScore=109.0447;InbreedingCoeff=0.9003;MQ=71.29;MQ0=0;MQRankSum=-5.293;QD=35.40;ReadPosRankSum=-3.047;VQSLOD=3.2312;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:41:72.84:475,73,0	1/1:4,5:9:9.50:213,10,0	0/0:11,0:11:11.86:0,12,140	0/0:8,0:9:1.74:0,2,82	1/1:8,19:27:63.17:1210,63,0	0/0:3,0:19:24.70:0,25,125	0/0:1,0:17:22.95:0,23,92	1/1:12,13:30:69.21:1422,69,0	0/0:2,0:10:8.70:0,9,21	0/0:3,0:22:17.75:0,18,52	0/0:4,0:19:24.69:0,25,131	0/0:1,0:11:9.95:0,10,25	0/0:3,0:9:4.95:0,5,13	0/0:4,0:15:15.15:0,15,73	1/1:3,8:14:25.64:490,26,0	1/1:4,0:14:19.93:145,20,0	0/0:15,0:15:36.10:0,36,510	0/0:22,0:22:54.15:0,54,764	1/1:7,8:17:35.33:722,35,0	1/1:7,8:16:31.92:600,32,0	1/1:1,3:7:13.86:242,14,0	0/0:5,0:9:9.47:0,9,59	0/0:3,0:13:12.44:0,12,31	0/0:2,0:9:8.63:0,9,22	1/1:2,9:14:27.09:589,27,0	1/1:4,14:21:57.19:1224,57,0	1/1:10,14:25:33.11:746,33,0	1/1:4,18:24:51.17:1125,51,0
chr10	96231645	.	GT	G	5457.14	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.493;DP=488;FS=2.729;HRun=2;HaplotypeScore=48.1979;InbreedingCoeff=0.9920;MQ=78.30;MQ0=0;MQRankSum=-3.132;QD=36.63;ReadPosRankSum=3.179;VQSLOD=5.3117;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:36.12:0,36,526	1/1:0,8:8:24.08:312,24,0	0/0:22,0:22:54.04:0,54,854	0/0:17,0:17:48.08:0,48,616	1/1:0,21:21:63.20:818,63,0	0/0:33,0:33:99:0,99,1462	0/0:14,0:14:42.13:0,42,609	0/0:41,0:41:99:0,120,1730	0/0:15,0:15:45.15:0,45,674	0/0:18,0:18:54.18:0,54,810	0/0:17,0:17:51.17:0,51,764	0/0:16,0:16:48.16:0,48,718	0/0:25,0:25:75.23:0,75,1102	0/0:12,0:12:36.12:0,36,539	1/1:0,14:14:39.13:506,39,0	0/0:19,0:19:54.18:0,54,809	0/0:19,0:19:54.18:0,54,809	0/0:10,0:10:27.09:0,27,405	1/1:0,10:10:30.07:362,30,0	1/1:0,15:15:45.15:584,45,0	1/1:0,15:15:42.14:545,42,0	0/0:9,0:9:27.09:0,27,405	0/0:19,0:19:54.17:0,54,791	0/0:16,0:16:48.14:0,48,696	1/1:1,16:17:45.15:584,45,0	1/1:2,19:21:15.22:695,15,0	1/1:0,28:28:81.26:1051,81,0	0/0:4,0:4:12.04:0,12,179
chr10	96231890	.	AAAGC	A	10463.05	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.881;DP=634;FS=6.030;HRun=0;HaplotypeScore=107.8570;InbreedingCoeff=0.9994;MQ=83.20;MQ0=2;MQRankSum=-6.326;QD=48.00;ReadPosRankSum=2.551;VQSLOD=5.7916;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.24:0,75,1961	1/1:0,9:9:24.08:456,24,0	0/0:15,0:15:29.78:0,30,935	0/0:24,0:24:66.22:0,66,1586	1/1:0,40:39:99:2114,114,0	0/0:31,0:31:93.32:0,93,2501	0/0:20,0:20:60.21:0,60,1580	0/0:28,0:28:75.25:0,75,1946	0/0:17,0:17:48.16:0,48,1293	0/0:22,0:22:54.18:0,54,1423	0/0:21,0:21:63.22:0,63,1695	0/0:25,0:25:69.24:0,69,1836	0/0:24,0:24:66.23:0,66,1737	0/0:20,0:20:60.21:0,60,1614	1/1:0,24:23:60.21:1138,60,0	0/0:22,0:22:66.23:0,66,1772	0/0:31,0:31:93.32:0,93,2398	0/0:19,0:19:54.19:0,54,1402	1/1:2,20:21:60.16:1075,60,0	1/1:5,27:32:78.23:1422,78,0	1/1:1,18:19:42.14:798,42,0	0/0:25,0:25:74.47:0,74,1924	0/0:15,0:15:45.15:0,45,1215	0/0:22,0:22:66.22:0,66,1735	1/1:0,14:14:33.11:605,33,0	1/1:1,22:23:66.20:1207,66,0	1/1:1,34:35:86.91:1649,87,0	0/0:9,0:9:27.09:0,27,729
chr10	96232114	.	C	CTA	9437.24	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-13.739;DP=542;FS=0.000;HRun=0;HaplotypeScore=64.8688;InbreedingCoeff=0.9922;MQ=92.36;MQ0=0;MQRankSum=-2.268;QD=53.32;ReadPosRankSum=1.441;VQSLOD=5.4574;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:57.19:0,57,912	1/1:0,7:7:15.05:305,15,0	0/0:23,0:23:60.20:0,60,947	0/0:23,0:23:62.93:0,63,925	1/1:0,16:16:42.14:829,42,0	0/0:15,0:15:39.12:0,39,612	0/0:18,0:18:54.17:0,54,856	0/0:35,0:35:87.27:0,87,1329	0/0:20,0:20:60.20:0,60,971	0/0:13,0:13:30.10:0,30,490	0/0:13,0:13:36.12:0,36,587	0/0:18,0:18:54.18:0,54,881	0/0:13,0:13:36.12:0,36,582	0/0:23,0:23:69.24:0,69,1126	1/1:0,24:24:63.22:1280,63,0	0/0:28,0:28:84.29:0,84,1362	0/0:16,0:16:45.15:0,45,734	0/0:12,0:12:33.11:0,33,538	1/1:2,12:14:39.07:693,39,0	1/1:2,16:19:48.16:903,48,0	1/1:0,29:29:84.29:1707,84,0	0/0:23,0:23:63.20:0,63,995	0/0:9,0:9:27.09:0,27,441	0/0:35,0:35:99:0,105,1638	1/1:0,10:11:27.09:549,27,0	1/1:1,15:16:48.15:917,48,0	1/1:1,39:41:99:2255,111,0	0/0:5,0:5:12.04:0,12,196
chr10	96232796	.	GT	G	6701.04	PASS	AB=0.719;AC=51;AF=0.911;AN=56;BaseQRankSum=3.928;DP=373;FS=10.958;HRun=1;HaplotypeScore=296.0876;InbreedingCoeff=0.1872;MQ=47.39;MQ0=0;MQRankSum=-0.466;QD=18.01;ReadPosRankSum=6.593;VQSLOD=2.8938;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:23:32.81:353,33,0	0/1:1,2:3:10.94:33,0,11	0/1:8,0:8:3.07:99,0,3	0/0:1,0:1:3.01:0,3,38	1/1:2,15:17:41.79:314,42,0	1/1:1,11:12:32.85:249,33,0	1/1:2,12:14:2.04:230,2,0	1/1:2,17:19:33.50:327,33,0	1/1:1,15:16:44.80:341,45,0	1/1:1,18:19:54.81:382,55,0	1/1:1,12:13:18.99:258,19,0	1/1:2,10:12:29.85:223,30,0	1/1:1,14:15:32.87:252,33,0	1/1:1,17:18:50.77:385,51,0	1/1:4,13:17:20.96:278,21,0	1/1:2,21:23:62.72:476,63,0	1/1:0,7:7:20.88:154,21,0	1/1:1,4:5:11.89:84,12,0	1/1:3,13:16:34.94:252,35,0	1/1:1,10:11:12.94:199,13,0	1/1:1,6:7:14.91:109,15,0	1/1:2,14:16:22.83:275,23,0	1/1:0,9:9:21.78:157,22,0	1/1:0,8:8:14.93:114,15,0	0/1:2,8:10:9.93:145,0,10	1/1:5,16:21:39.73:394,40,0	1/1:1,23:24:51.03:483,51,0	1/1:1,7:8:2.97:133,3,0
chr10	96233092	.	C	CCATGAAGAATTAC	14688.43	PASS	AB=0.667;AC=50;AF=0.962;AN=52;BaseQRankSum=-0.529;DP=173;FS=28.882;HRun=0;HaplotypeScore=160.1345;InbreedingCoeff=-0.0817;MQ=79.14;MQ0=0;MQRankSum=-3.081;QD=88.48;ReadPosRankSum=1.819;VQSLOD=3.0074;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:33.07:1315,33,0	1/1:3,0:3:9.03:419,9,0	0/1:4,0:8:14.20:588,0,14	0/1:3,1:6:21.12:250,0,21	1/1:5,0:5:12.04:514,12,0	./.	1/1:8,0:8:9.03:424,9,0	1/1:16,0:16:39.42:1268,39,0	1/1:9,0:9:18.06:861,18,0	1/1:7,0:7:12.04:416,12,0	1/1:3,0:3:9.03:311,9,0	1/1:2,0:2:6.02:337,6,0	1/1:4,0:4:9.03:365,9,0	1/1:6,0:6:8.99:354,9,0	1/1:7,0:7:6.02:334,6,0	1/1:5,0:5:8.90:60,9,0	1/1:5,0:5:15.05:719,15,0	1/1:4,0:4:9.03:460,9,0	1/1:12,0:12:24.04:1177,24,0	1/1:7,0:7:18.06:959,18,0	1/1:3,0:3:9.03:455,9,0	1/1:5,0:5:8.99:311,9,0	1/1:4,0:4:6.02:260,6,0	1/1:5,0:5:12.04:647,12,0	1/1:7,0:7:21.07:1022,21,0	1/1:5,0:5:12.04:464,12,0	1/1:5,0:5:12.04:400,12,0	./.
chr10	96235184	.	TTTCATTCA	T	464.55	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.929;DP=518;FS=1.007;HRun=0;HaplotypeScore=125.9174;InbreedingCoeff=0.8471;MQ=75.80;MQ0=0;MQRankSum=2.271;QD=22.12;ReadPosRankSum=-3.465;VQSLOD=2.6537;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.15:0,78,2792	0/0:3,0:3:6.02:0,6,256	0/0:31,0:29:45.66:0,46,1552	0/0:17,0:16:18.47:0,18,900	0/0:25,0:25:72.25:0,72,2837	0/0:13,0:13:36.10:0,36,1320	0/0:19,0:19:48.14:0,48,1746	1/1:5,12:17:35.70:493,36,0	0/0:24,0:24:63.22:0,63,2577	0/0:24,0:24:57.16:0,57,1995	0/0:14,0:15:36.12:0,36,1248	0/0:16,0:16:45.13:0,45,1644	0/0:16,0:16:48.08:0,48,1690	0/0:14,0:14:39.11:0,39,1460	0/0:10,0:10:27.08:0,27,1050	0/0:13,0:13:33.10:0,33,1294	0/0:21,0:21:57.18:0,57,2089	0/0:18,0:18:54.19:0,54,2130	0/0:17,0:17:42.06:0,42,1046	0/0:19,0:19:57.13:0,57,1832	0/0:36,0:36:99:0,102,3594	0/0:10,0:10:27.08:0,27,1038	0/0:19,0:19:54.17:0,54,2138	0/0:26,0:26:72.13:0,72,2478	0/0:18,0:18:54.15:0,54,1954	0/0:22,0:22:63.20:0,63,2298	0/0:22,0:22:63.14:0,63,2212	1/1:3,1:4:3.01:80,3,0
chr10	96236792	.	A	AT	1144.46	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.090;DP=672;FS=11.972;HRun=7;HaplotypeScore=83.0947;InbreedingCoeff=0.9866;MQ=76.34;MQ0=0;MQRankSum=-0.838;QD=27.25;ReadPosRankSum=-0.952;VQSLOD=3.0295;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,99,949	0/0:10,0:10:27.04:0,27,261	0/0:22,0:22:47.81:0,48,449	0/0:16,1:17:13.20:0,13,284	0/0:31,0:31:81.09:0,81,770	0/0:24,0:24:66.11:0,66,637	0/0:17,0:17:30.03:0,30,290	1/1:3,26:29:75.23:904,75,0	0/0:26,0:26:72.11:0,72,695	0/0:40,0:40:99:0,108,1040	0/0:26,0:26:72.11:0,72,695	0/0:20,0:20:51.07:0,51,492	0/0:27,0:27:72.05:0,72,680	0/0:23,0:23:57.04:0,57,541	0/0:20,0:20:60.10:0,60,579	0/0:22,0:22:63.10:0,63,608	0/0:22,0:21:45.75:0,46,459	0/0:22,0:22:57.09:0,57,550	0/0:22,0:22:57.08:0,57,546	0/0:29,0:29:75.12:0,75,724	0/0:12,0:12:33.05:0,33,318	0/0:31,0:31:78.12:0,78,753	0/0:21,0:21:54.09:0,54,521	0/0:14,0:14:39.06:0,39,377	0/0:29,0:29:87.14:0,87,840	0/0:22,0:22:63.10:0,63,608	0/0:37,0:36:99:0,102,979	1/1:2,11:13:30.09:362,30,0
chr10	96238444	.	CAAA	C	2332.49	PASS	AB=0.690;AC=17;AF=0.304;AN=56;BaseQRankSum=-3.703;DP=431;FS=8.926;HRun=15;HaplotypeScore=77.7571;InbreedingCoeff=0.8353;MQ=54.17;MQ0=18;MQRankSum=0.220;QD=14.95;ReadPosRankSum=2.021;VQSLOD=1.9302;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:49.28:0,49,443	1/1:3,6:8:14.98:168,15,0	0/0:10,0:5:1.66:0,2,117	0/0:7,0:3:7.64:0,8,53	1/1:8,16:24:35.94:387,36,0	0/0:8,0:13:16.25:0,16,200	0/0:8,0:17:28.08:0,28,231	0/0:27,0:26:60.03:0,60,643	0/0:8,0:14:22.18:0,22,204	0/0:7,0:16:32.37:0,32,237	0/0:8,0:21:47.74:0,48,388	0/0:7,0:11:14.94:0,15,143	0/0:7,0:17:22.12:0,22,186	0/0:5,0:8:14.93:0,15,142	1/1:5,5:11:16.34:168,16,0	0/0:10,0:9:20.99:0,21,211	0/0:17,0:17:39.59:0,40,622	0/0:14,0:14:30.08:0,30,494	0/1:11,7:18:29.72:225,0,30	1/1:6,10:16:29.91:332,30,0	1/1:4,5:7:15.01:168,15,0	0/0:1,0:4:8.93:0,9,65	0/0:4,0:13:20.91:0,21,175	0/0:3,0:5:14.63:0,15,97	1/1:8,14:21:34.46:401,34,0	1/1:6,13:19:38.85:419,39,0	1/1:10,11:18:23.49:268,23,0	0/0:19,0:17:9.71:0,10,487
chr10	96238458	.	AAT	A	1036.81	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.942;DP=404;FS=1.704;HRun=0;HaplotypeScore=72.5646;InbreedingCoeff=0.7652;MQ=60.56;MQ0=7;MQRankSum=-0.090;QD=11.39;ReadPosRankSum=-1.994;VQSLOD=3.1723;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,5:25:27.34:393,27,0	0/0:10,0:9:17.08:0,17,120	0/0:16,0:7:16.84:0,17,199	0/0:8,0:4:6.88:0,7,59	0/0:21,0:20:37.88:0,38,179	0/0:11,0:11:14.21:0,14,154	0/0:12,0:12:15.44:0,15,151	1/1:35,0:34:14.59:442,15,0	0/0:11,0:11:21.49:0,21,189	0/0:15,0:14:34.56:0,35,218	0/0:21,0:20:53.11:0,53,370	0/0:9,0:9:17.77:0,18,143	0/0:12,0:12:13.54:0,14,108	0/0:10,0:9:23.73:0,24,188	0/0:10,0:10:16.20:0,16,84	1/1:13,0:13:24.33:228,24,0	0/0:18,0:18:39.02:0,39,497	0/0:11,0:11:27.02:0,27,375	0/0:14,0:13:26.87:0,27,158	0/0:14,0:14:26.06:0,26,151	0/0:7,0:7:15.25:0,15,74	0/0:5,0:5:11.88:0,12,85	0/0:14,0:14:29.63:0,30,215	0/0:5,0:5:8.88:0,9,59	0/0:20,0:20:42.56:0,43,229	0/0:18,0:17:36.40:0,36,196	0/0:21,0:19:32.99:0,33,214	0/1:18,0:17:10.92:120,0,11
chr10	96238459	.	AT	A	1771.21	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-3.301;DP=396;FS=1.646;HRun=1;HaplotypeScore=62.4184;InbreedingCoeff=0.8966;MQ=61.85;MQ0=7;MQRankSum=-0.358;QD=21.87;ReadPosRankSum=-2.246;VQSLOD=3.1459;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,6:22:57.11:492,57,0	0/0:10,0:9:23:0,23,149	0/0:16,0:7:17.85:0,18,175	0/0:9,0:5:8.89:0,9,76	0/0:22,0:21:45.86:0,46,275	0/0:11,0:11:15.82:0,16,115	0/0:12,0:12:20:0,20,119	1/1:3,30:32:50.27:832,50,0	0/0:10,1:11:15.37:0,15,121	0/0:15,1:15:25.68:0,26,175	0/0:20,0:19:32.05:0,32,194	0/0:8,0:8:10.89:0,11,85	0/0:12,0:12:4.63:0,5,79	0/0:10,0:9:17.61:0,18,134	0/0:10,0:10:24.66:0,25,135	1/1:7,5:12:34.78:352,35,0	0/0:18,0:18:34.08:0,34,358	0/0:10,0:10:25.86:0,26,272	0/0:15,0:14:37.20:0,37,232	0/0:15,0:15:39.15:0,39,234	0/0:7,0:7:19.24:0,19,103	0/0:5,0:5:10.05:0,10,61	0/0:14,0:14:23.99:0,24,140	0/0:5,0:5:9.62:0,10,58	0/0:20,0:20:51.51:0,52,317	0/0:18,0:17:43.88:0,44,272	0/0:21,0:19:42.04:0,42,260	1/1:10,4:13:28.50:255,29,0
chr10	96239798	.	C	CATTAAACTTCAATTCCATGTA	131759.54	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=1.474;DP=712;FS=1.556;HRun=0;HaplotypeScore=341.1358;InbreedingCoeff=0.9953;MQ=60.96;MQ0=0;MQRankSum=-12.600;QD=204.91;ReadPosRankSum=2.654;VQSLOD=4.5600;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,5:20:54.19:4526,54,0	1/1:4,2:9:18.06:1676,18,0	0/0:12,0:12:36.10:0,36,1230	0/0:16,0:16:39.11:0,39,1466	1/1:19,8:32:81.23:5428,81,0	1/1:19,13:37:96.33:8380,96,0	1/1:27,4:31:84.29:6623,84,0	1/1:45,0:45:99:6739,132,0	1/1:21,9:34:81.28:7341,81,0	1/1:21,5:27:78.27:5974,78,0	1/1:13,3:20:39.13:3347,39,0	1/1:19,10:29:87.30:7573,87,0	1/1:17,10:34:78.27:6327,78,0	1/1:22,8:33:90.31:7499,90,0	1/1:19,9:29:84.29:6793,84,0	1/1:22,10:36:93.32:7949,93,0	0/0:27,0:27:81.28:0,81,4112	0/0:14,0:14:42.14:0,42,2249	1/1:13,2:17:45.15:3012,45,0	1/1:16,7:29:75.17:4979,75,0	1/1:18,0:18:33.06:1821,33,0	1/1:10,4:15:42.10:2940,42,0	1/1:10,3:15:39.61:2918,40,0	1/1:6,7:15:39.09:2726,39,0	1/1:19,9:29:84.29:6801,84,0	1/1:24,10:39:99:8207,114,0	1/1:30,10:43:99:10489,123,0	1/1:4,2:7:18.06:1689,18,0
chr10	96242037	.	A	AGAGAGAGAGAGAG	12367.56	PASS	AB=0.858;AC=27;AF=0.482;AN=56;BaseQRankSum=-3.720;DP=457;FS=5.040;HRun=0;HaplotypeScore=139.1207;InbreedingCoeff=-0.2476;MQ=41.15;MQ0=41;MQRankSum=-6.070;QD=40.55;ReadPosRankSum=2.394;VQSLOD=4.0255;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:23:42.60:705,0,43	0/1:8,0:8:18.25:165,0,18	0/0:49,0:5:11.83:0,12,263	0/0:50,0:8:10.64:0,11,256	0/1:14,3:19:32.48:905,0,32	1/1:7,2:10:18.04:1033,18,0	0/1:15,0:15:39.54:305,0,40	0/1:20,0:21:46.44:606,0,46	0/0:8,0:8:6.40:0,6,52	0/1:10,1:9:35.29:849,0,35	0/1:10,0:11:32.46:88,0,32	0/1:7,0:8:14.32:133,0,14	0/1:4,0:7:30.02:252,0,30	0/1:8,3:9:35.49:572,0,35	1/1:6,1:11:9.01:578,9,0	0/1:12,0:15:88.61:879,0,89	0/0:20,0:19:36.04:0,36,831	0/0:17,0:14:30.09:0,30,718	0/1:13,1:10:1.94:680,0,2	0/1:9,0:10:46.35:408,0,46	0/0:5,0:4:3:0,3,27	0/1:13,0:14:42.23:175,0,42	1/1:10,3:15:11.30:735,11,0	0/1:11,0:10:54.70:533,0,55	1/1:10,2:11:12.03:631,12,0	0/1:24,0:23:77.59:1220,0,78	1/1:8,0:12:20.43:611,20,0	0/1:5,0:6:17.92:304,0,18
chr10	96243361	.	TTTTTTTTTG	T	3427.91	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=7.817;DP=549;FS=4.474;HRun=0;HaplotypeScore=187.8954;InbreedingCoeff=0.1433;MQ=64.59;MQ0=12;MQRankSum=-6.280;QD=8.20;ReadPosRankSum=4.480;VQSLOD=1.8524;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:35:40.20:52,0,40	1/1:7,0:7:15.03:205,15,0	0/1:40,0:16:16.47:16,0,39	0/0:34,0:17:10.88:0,11,263	1/1:26,0:26:55.01:415,55,0	0/1:17,0:15:33.67:40,0,34	1/1:18,0:17:1.53:128,2,0	0/0:19,0:17:0.35:0,0,285	0/0:12,0:12:6.25:0,6,36	0/1:29,0:26:26.49:52,0,26	0/1:18,0:18:40.94:105,0,41	0/1:17,0:17:1.64:2,0,15	0/1:15,0:14:13.89:14,0,79	0/1:16,0:14:13.24:13,0,34	1/1:22,1:23:44.65:373,45,0	0/0:6,0:6:7.49:0,7,44	0/0:29,0:29:87.26:0,87,3500	0/0:21,0:20:48.13:0,48,1779	0/1:15,0:13:13.87:125,0,14	1/1:22,1:23:41.46:409,41,0	1/1:15,0:15:12.70:63,13,0	0/1:11,0:11:11.87:22,0,12	0/1:13,0:11:18.41:20,0,18	1/1:13,0:13:8.69:63,9,0	1/1:10,0:9:24.41:251,24,0	1/1:17,0:17:32.56:339,33,0	1/1:36,2:38:73.45:721,73,0	0/0:10,0:9:21.80:0,22,309
chr10	96243364	.	TTTTTTG	T	9062.08	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=5.688;DP=537;FS=0.523;HRun=0;HaplotypeScore=135.8391;InbreedingCoeff=0.3871;MQ=61.60;MQ0=13;MQRankSum=-4.207;QD=18.61;ReadPosRankSum=-2.001;VQSLOD=4.2805;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:32:44.56:441,45,0	1/1:0,5:5:14.98:263,15,0	0/1:37,0:13:13.59:30,0,14	0/1:37,0:16:1.42:1,0,188	1/1:5,21:26:63.04:1062,63,0	1/1:18,0:16:20.86:178,21,0	1/1:14,1:14:13.12:262,13,0	0/1:18,0:16:39.20:82,0,39	1/1:10,0:10:9.35:52,9,0	1/1:31,0:28:48.28:392,48,0	1/1:17,0:17:24.06:202,24,0	1/1:16,0:16:19.92:135,20,0	1/1:14,1:14:17.65:176,18,0	1/1:13,0:11:0.19:71,0,0	1/1:5,17:22:44.64:897,45,0	1/1:8,0:8:6.98:28,7,0	0/0:29,0:29:87.26:0,87,2503	0/0:21,0:20:48.11:0,48,1307	1/1:10,3:11:26.37:312,26,0	1/1:7,17:24:48.01:795,48,0	1/1:6,8:14:17.56:290,18,0	1/1:11,0:11:2.54:139,3,0	1/1:12,1:11:11.94:112,12,0	1/1:13,0:13:9.47:109,9,0	1/1:6,5:10:27.08:511,27,0	1/1:4,13:17:35.58:743,36,0	1/1:12,26:38:87.07:1741,87,0	0/1:11,0:10:38.09:38,0,57
chr10	96243365	.	TTTTTG	T	7445.60	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=5.869;DP=539;FS=3.946;HRun=0;HaplotypeScore=132.0504;InbreedingCoeff=0.4248;MQ=60.50;MQ0=13;MQRankSum=-3.852;QD=15.23;ReadPosRankSum=-3.173;VQSLOD=3.9105;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:32:48.33:439,48,0	1/1:5,0:5:14.98:187,15,0	0/1:37,0:13:7.54:40,0,8	0/1:39,0:15:5.39:5,0,153	1/1:25,1:26:62.95:764,63,0	1/1:18,0:16:23.85:179,24,0	1/1:15,0:14:7.63:233,8,0	0/1:18,0:16:3.93:135,0,4	1/1:10,0:10:7.20:59,7,0	1/1:32,0:29:59.85:443,60,0	1/1:17,0:17:25.65:206,26,0	1/1:16,0:16:15.12:119,15,0	1/1:15,0:14:18.58:180,19,0	1/1:12,0:10:9.86:81,10,0	1/1:22,0:22:43.70:622,44,0	1/1:8,0:8:10.15:72,10,0	0/0:29,0:29:87.26:0,87,2184	0/0:21,0:20:48.08:0,48,1133	1/1:12,1:11:4.65:229,5,0	1/1:23,1:24:48:604,48,0	1/1:12,1:13:17.83:208,18,0	1/1:11,0:11:6.29:144,6,0	1/1:13,0:11:12.43:115,12,0	1/1:13,0:13:9.46:107,9,0	1/1:11,1:11:27.08:398,27,0	1/1:17,0:17:35.99:562,36,0	1/1:38,0:38:86.89:1242,87,0	0/1:11,0:10:3.31:73,0,3
chr10	96243369	.	TG	T	6523.76	PASS	AB=0.926;AC=50;AF=0.893;AN=56;BaseQRankSum=8.187;DP=509;FS=7.192;HRun=1;HaplotypeScore=96.7890;InbreedingCoeff=0.6591;MQ=56.70;MQ0=13;MQRankSum=-4.964;QD=14.34;ReadPosRankSum=-2.916;VQSLOD=3.0288;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:30:78.83:587,79,0	1/1:5,0:5:14.82:102,15,0	0/1:31,5:10:13.37:27,0,13	0/1:36,1:13:4.84:5,0,49	1/1:24,0:24:61.95:430,62,0	1/1:18,0:16:33.07:246,33,0	1/1:14,0:13:34.57:231,35,0	1/1:16,1:15:40.69:327,41,0	1/1:8,0:8:21.88:144,22,0	1/1:28,1:26:75.59:607,76,0	1/1:15,0:15:28.34:219,28,0	1/1:14,0:14:32.02:206,32,0	1/1:15,0:14:37.91:265,38,0	1/1:12,0:10:28.98:209,29,0	1/1:20,0:20:43.20:308,43,0	1/1:7,0:7:13.15:99,13,0	0/0:32,0:32:95.49:0,95,963	0/0:22,0:21:57.05:0,57,569	1/1:14,0:11:25.71:195,26,0	1/1:19,0:19:47.56:338,48,0	1/1:10,0:10:17.39:113,17,0	1/1:10,0:10:21.48:177,21,0	1/1:10,0:8:19.20:152,19,0	1/1:12,2:13:9.36:83,9,0	1/1:12,0:11:24.79:190,25,0	1/1:16,1:17:47.23:333,47,0	1/1:31,2:33:86.32:642,86,0	1/1:11,2:12:35.78:290,36,0
chr10	96243764	.	CAT	C	23025.60	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=4.948;DP=706;FS=5.426;HRun=0;HaplotypeScore=88.5753;InbreedingCoeff=0.9966;MQ=86.30;MQ0=3;MQRankSum=-7.921;QD=37.26;ReadPosRankSum=3.834;VQSLOD=6.8534;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:78.26:1092,78,0	1/1:0,7:7:21.07:294,21,0	0/0:28,0:28:75.24:0,75,1244	0/0:18,0:18:48.16:0,48,812	1/1:0,29:29:81.27:1134,81,0	1/1:2,26:28:72.24:1008,72,0	1/1:1,21:22:57.19:798,57,0	1/1:3,36:39:99:1496,108,0	1/1:2,33:35:87.29:1219,87,0	1/1:2,21:23:66.22:921,66,0	1/1:2,21:23:60.20:840,60,0	1/1:1,28:29:84.28:1177,84,0	1/1:1,26:27:72.24:1008,72,0	1/1:3,30:33:78.26:1092,78,0	1/1:2,26:28:69.23:966,69,0	1/1:1,30:31:90.30:1261,90,0	0/0:25,0:25:72.25:0,72,1296	0/0:17,0:17:51.17:0,51,918	1/1:2,23:25:69.21:948,69,0	1/1:0,28:26:72.24:1008,72,0	1/1:2,21:23:57.19:798,57,0	1/1:2,16:18:45.15:630,45,0	1/1:0,26:26:66.22:924,66,0	1/1:0,23:23:63.21:882,63,0	1/1:0,28:28:78.26:1092,78,0	1/1:2,23:24:66.22:924,66,0	1/1:0,31:31:90.30:1260,90,0	1/1:0,7:6:18.06:252,18,0
chr10	96244611	.	AGAACC	A	982.09	PASS	AB=0.930;AC=19;AF=0.528;AN=36;BaseQRankSum=4.997;DP=238;FS=2.110;HRun=0;HaplotypeScore=75.2598;InbreedingCoeff=-0.3646;MQ=48.70;MQ0=13;MQRankSum=-3.032;QD=5.37;ReadPosRankSum=-0.898;VQSLOD=1.7905;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,3:5:5.28:98,5,0	0/1:5,0:5:62.31:63,0,62	0/0:6,0:1:3.01:0,3,63	0/0:8,0:6:2.96:0,3,45	0/1:24,1:25:72.75:73,0,298	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:59,3,0	0/1:10,1:10:16.51:17,0,269	./.	0/1:28,2:27:76.34:76,0,893	0/0:35,0:35:71.63:0,72,1641	0/1:19,0:19:55.71:56,0,697	0/1:21,1:22:99:335,0,426	0/1:8,1:8:54.88:55,0,153	./.	1/1:0,1:1:2.04:6,2,0	0/1:1,2:3:2.30:15,0,2	0/1:11,0:9:51.16:51,0,202	0/1:22,1:21:99:112,0,687	0/1:12,0:12:20.79:21,0,276	1/1:5,0:3:8.95:68,9,0
chr10	96244721	.	GA	G	774.86	PASS	AB=0.750;AC=15;AF=0.278;AN=54;BaseQRankSum=3.875;DP=449;FS=8.281;HRun=14;HaplotypeScore=63.6988;InbreedingCoeff=0.4252;MQ=54.21;MQ0=10;MQRankSum=0.929;QD=5.10;ReadPosRankSum=2.367;VQSLOD=1.7772;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,2:25:24.78:0,25,487	1/1:0,7:7:8.92:62,9,0	0/0:12,2:4:1.94:0,2,11	0/0:12,0:3:4.22:0,4,37	1/1:19,10:28:8.42:184,8,0	0/1:6,0:7:8.04:8,0,68	0/0:12,0:13:20.02:0,20,203	0/0:16,0:15:27.02:0,27,245	0/0:11,0:11:27.01:0,27,245	0/0:20,0:21:40.10:0,40,341	0/0:17,1:18:42.04:0,42,386	0/0:24,1:24:27.41:0,27,385	0/0:20,0:21:32.62:0,33,455	0/0:14,0:14:29.79:0,30,234	0/1:7,10:16:2.29:102,0,2	0/0:14,0:14:32.85:0,33,278	0/0:25,0:24:30.52:0,31,417	0/0:19,7:26:12.19:0,12,220	1/1:8,7:13:16.38:123,16,0	1/1:9,15:24:0.65:148,1,0	0/1:5,2:7:18.94:32,0,19	0/0:13,0:15:27.92:0,28,211	0/0:12,0:12:3.62:0,4,163	0/0:9,0:7:18.02:0,18,166	0/1:7,7:14:23.40:82,0,23	0/1:10,6:16:10.72:67,0,11	1/1:6,8:14:6.20:130,6,0	./.
chr10	96245361	.	GTTTAATA	G	12583.81	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.841;DP=579;FS=8.803;HRun=0;HaplotypeScore=138.5965;InbreedingCoeff=0.9972;MQ=79.17;MQ0=0;MQRankSum=-16.386;QD=57.99;ReadPosRankSum=1.210;VQSLOD=4.7870;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.21:0,84,2979	0/0:6,0:6:18.06:0,18,720	0/0:17,0:17:39.12:0,39,1460	0/0:21,0:21:58.90:0,59,1905	0/0:21,0:21:60.19:0,60,2300	1/1:2,19:21:33.11:805,33,0	1/1:3,12:15:24.08:617,24,0	0/0:43,0:43:99:0,111,4297	1/1:1,17:18:48.16:1196,48,0	1/1:0,24:24:72.25:1837,72,0	1/1:1,24:25:69.24:1621,69,0	1/1:0,14:14:36.12:911,36,0	1/1:0,22:22:51.18:1322,51,0	1/1:0,14:14:36.12:929,36,0	0/0:22,0:22:60.18:0,60,2138	0/0:12,0:12:33.11:0,33,1318	0/0:16,0:16:48.15:0,48,1746	0/0:22,0:22:60.21:0,60,2271	0/0:23,0:23:60.21:0,60,2303	0/0:28,0:28:84.27:0,84,3199	0/0:22,0:22:66.22:0,66,2526	1/1:1,27:28:72.25:1746,72,0	1/1:1,20:21:48.16:1133,48,0	1/1:1,14:15:17.90:466,18,0	0/0:16,0:16:45.15:0,45,1724	0/0:18,0:18:51.18:0,51,1947	0/0:34,0:34:99:0,99,3624	0/0:13,0:13:39.13:0,39,1558
chr10	96246240	.	TTTTTCTTTTTTTTTTTTTTGGGTC	T	1897.35	PASS	AB=0.625;AC=21;AF=0.375;AN=56;BaseQRankSum=-7.372;DP=450;FS=41.362;HRun=0;HaplotypeScore=204.1243;InbreedingCoeff=0.7755;MQ=49.66;MQ0=19;MQRankSum=4.522;QD=16.79;ReadPosRankSum=-5.511;VQSLOD=-0.5289;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:8.06:0,8,811	0/0:7,0:7:21.07:0,21,1085	0/0:68,0:11:0.21:0,0,304	0/0:53,0:6:4.67:0,5,81	0/0:21,0:21:57.19:0,57,3264	1/1:6,0:6:8:52,8,0	1/1:16,2:18:7.90:501,8,0	0/0:20,0:19:17.63:0,18,957	1/1:2,0:2:5:26,5,0	1/1:18,0:18:17.55:135,18,0	1/1:8,0:7:8.89:58,9,0	1/1:5,0:5:13.49:86,13,0	1/1:5,0:5:10.34:204,10,0	1/1:12,1:13:9.16:257,9,0	0/0:9,0:8:18:0,18,1165	0/0:9,0:9:21.06:0,21,347	0/0:22,0:22:44.88:0,45,2928	0/0:6,0:6:15.05:0,15,1206	0/0:15,0:15:38.99:0,39,1769	0/0:15,0:15:29.13:0,29,1630	0/0:3,0:3:9.03:0,9,286	1/1:11,0:10:23.87:192,24,0	0/1:6,9:15:10.40:179,0,10	1/1:11,1:12:16.71:408,17,0	0/0:17,0:17:38.85:0,39,2203	0/0:25,0:25:32.42:0,32,3163	0/0:21,0:20:19.49:0,19,2630	0/0:5,0:4:12.04:0,12,361
chr10	96246258	.	TTGGGTC	T	3839.07	PASS	AB=1.000;AC=35;AF=0.648;AN=54;BaseQRankSum=-6.620;DP=366;FS=7.145;HRun=0;HaplotypeScore=73.5289;InbreedingCoeff=0.4349;MQ=36.21;MQ0=17;MQRankSum=0.211;QD=19.20;ReadPosRankSum=-2.269;VQSLOD=1.4327;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:19.88:359,20,0	0/1:6,0:6:5.27:5,0,124	0/0:41,0:2:4.26:0,4,57	./.	0/0:23,0:23:15.06:0,15,627	1/1:6,0:6:15.01:271,15,0	1/1:15,0:15:9.03:148,9,0	1/1:10,0:10:24.69:254,25,0	1/1:3,0:3:8.99:146,9,0	1/1:8,0:8:17.99:313,18,0	1/1:2,8:9:8.79:53,9,0	1/1:5,1:6:14.88:233,15,0	1/1:3,0:3:9.03:175,9,0	1/1:10,0:9:18.06:362,18,0	0/0:14,0:13:19.86:0,20,322	1/1:8,0:8:18.06:341,18,0	0/0:25,0:24:19.07:0,19,645	0/1:7,0:7:14.11:14,0,187	0/0:14,0:14:6.18:0,6,427	0/0:11,0:11:11.92:0,12,281	0/1:4,0:4:3.49:3,0,65	1/1:10,0:10:26.98:518,27,0	1/1:9,0:9:3.01:49,3,0	1/1:13,0:11:18.06:348,18,0	0/1:17,0:17:99:124,0,324	0/1:20,0:20:0.37:0,0,545	0/1:20,0:19:66.27:66,0,432	0/1:5,0:4:3.25:57,0,3
chr10	96246259	.	TGGGTC	T	3911.99	PASS	AB=0.861;AC=34;AF=0.607;AN=56;BaseQRankSum=-5.225;DP=333;FS=5.971;HRun=0;HaplotypeScore=63.4690;InbreedingCoeff=0.4660;MQ=37.06;MQ0=16;MQRankSum=-2.012;QD=19.46;ReadPosRankSum=-0.953;VQSLOD=2.0612;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:8:19.62:360,20,0	0/1:5,0:5:3.30:3,0,130	0/0:36,0:2:3.01:0,3,54	0/1:31,1:1:0:0,0,0	0/0:20,0:20:2.68:0,3,550	1/1:0,6:6:15.02:272,15,0	1/1:15,0:15:9.03:128,9,0	1/1:2,8:10:24.30:281,24,0	1/1:0,3:3:9:148,9,0	1/1:0,8:8:18.02:316,18,0	1/1:10,0:9:8.87:57,9,0	1/1:2,4:6:14.91:234,15,0	1/1:1,1:3:9.03:168,9,0	1/1:1,9:9:18.06:356,18,0	0/0:11,0:12:22.29:0,22,292	1/1:0,8:8:18.06:364,18,0	0/0:23,0:22:19.42:0,19,585	0/1:6,0:7:27.41:27,0,157	0/0:13,0:13:5.82:0,6,399	0/0:8,0:8:17.33:0,17,250	0/0:2,0:2:0.10:0,0,66	1/1:1,9:10:27.02:521,27,0	1/1:9,0:9:3.01:42,3,0	1/1:3,10:11:18.06:335,18,0	0/1:11,0:14:99:130,0,296	0/0:17,0:17:14.74:0,15,560	0/1:13,0:18:99:112,0,399	0/1:3,2:4:3.13:57,0,3
chr10	96248871	.	TGTTC	T	2393.85	PASS	AB=1.000;AC=37;AF=0.685;AN=54;BaseQRankSum=0.692;DP=286;FS=1.837;HRun=0;HaplotypeScore=42.2048;InbreedingCoeff=0.0628;MQ=37.93;MQ0=60;MQRankSum=0.272;QD=8.97;ReadPosRankSum=-0.999;VQSLOD=2.0577;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:8:22.89:284,23,0	0/0:7,0:6:3.91:0,4,142	0/0:2,0:1:1.25:0,1,3	0/0:2,0:1:2.97:0,3,20	0/1:24,0:23:99:106,0,463	1/1:8,0:8:21.06:262,21,0	1/1:6,0:5:12.92:152,13,0	1/1:1,9:9:24.08:314,24,0	1/1:5,0:2:6.02:80,6,0	1/1:4,5:6:5.19:46,5,0	1/1:11,0:8:23.97:253,24,0	1/1:9,0:8:19.61:259,20,0	1/1:4,0:4:9.03:118,9,0	1/1:1,0:1:3.01:33,3,0	0/1:7,0:6:50.60:51,0,150	1/1:6,0:4:12.01:142,12,0	0/1:29,0:21:52.10:52,0,496	0/1:17,0:9:27.35:27,0,256	0/1:16,0:12:90.52:91,0,281	0/1:19,0:16:24.61:25,0,347	0/0:5,0:3:5.95:0,6,83	1/1:1,1:2:3.01:31,3,0	1/1:6,0:5:7.54:65,8,0	1/1:11,0:8:6.93:80,7,0	0/1:14,0:13:4.93:5,0,262	0/1:16,0:10:71.46:71,0,129	0/1:22,0:22:1.40:1,0,494	./.
chr10	96249047	.	A	ATTCAT	10507.27	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-8.540;DP=421;FS=5.764;HRun=0;HaplotypeScore=79.5376;InbreedingCoeff=0.9887;MQ=79.83;MQ0=0;MQRankSum=-5.803;QD=78.41;ReadPosRankSum=3.773;VQSLOD=6.7799;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:60.18:0,60,1260	0/0:5,0:5:15.05:0,15,326	0/0:18,0:18:46.88:0,47,919	0/0:6,0:6:18.06:0,18,347	0/0:19,0:19:57.20:0,57,1238	1/1:3,13:16:39.13:1216,39,0	1/1:5,8:13:33.11:944,33,0	0/0:32,0:31:90.31:0,90,1905	1/1:1,11:12:36.12:1130,36,0	1/1:2,9:11:30.10:949,30,0	1/1:0,9:9:24.08:761,24,0	1/1:2,9:11:33.11:968,33,0	1/1:1,9:13:24.08:760,24,0	1/1:2,5:7:21.07:648,21,0	0/0:16,0:16:45.15:0,45,975	0/0:7,0:7:21.07:0,21,434	0/0:13,0:13:39.13:0,39,846	0/0:16,0:16:45.12:0,45,926	0/0:28,0:28:78.27:0,78,1674	0/0:30,0:30:81.28:0,81,1750	0/0:12,0:12:33.10:0,33,675	1/1:3,5:8:24.08:663,24,0	1/1:5,16:22:51.18:1519,51,0	1/1:2,10:12:30.10:949,30,0	0/0:6,0:6:18.04:0,18,349	0/0:22,0:22:60.20:0,60,1255	0/0:28,0:27:75.23:0,75,1549	0/0:4,0:4:12.04:0,12,261
chr10	96249083	.	CAAA	C	1900.72	PASS	AB=0.564;AC=19;AF=0.339;AN=56;BaseQRankSum=0.013;DP=440;FS=2.326;HRun=17;HaplotypeScore=82.4553;InbreedingCoeff=0.8325;MQ=69.34;MQ0=3;MQRankSum=3.289;QD=11.38;ReadPosRankSum=6.651;VQSLOD=0.5231;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:5,3:22:49.02:49,0,204	1/1:2,1:4:1.56:28,2,0	0/0:21,0:13:7.92:0,8,189	0/0:19,0:9:8.43:0,8,84	1/1:6,13:22:34.25:303,34,0	0/0:10,0:17:40.15:0,40,344	0/0:7,0:11:19.21:0,19,183	0/0:24,0:31:39.57:0,40,546	0/0:7,0:7:5.96:0,6,44	0/0:5,0:9:23.95:0,24,224	0/0:8,0:15:26.46:0,26,238	0/0:6,0:9:20.95:0,21,214	0/0:15,0:19:35.90:0,36,344	0/0:8,0:10:24.02:0,24,275	1/1:3,8:13:19.52:200,20,0	0/0:2,0:9:20.95:0,21,178	0/0:13,1:18:17.30:0,17,635	0/0:17,0:21:39.06:0,39,573	1/1:8,11:24:34.06:313,34,0	1/1:4,16:21:18.70:348,19,0	1/1:4,8:14:14.84:153,15,0	0/0:8,0:14:32.96:0,33,342	0/0:10,0:19:38.44:0,38,351	0/0:10,0:12:22.27:0,22,246	1/1:1,6:7:11.99:123,12,0	1/1:6,12:18:32.67:338,33,0	1/1:6,13:21:26.65:250,27,0	0/0:6,0:8:13.23:0,13,145
chr10	96249269	.	T	TA	1089.51	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-8.251;DP=519;FS=11.105;HRun=12;HaplotypeScore=57.4692;InbreedingCoeff=0.8950;MQ=74.97;MQ0=0;MQRankSum=1.725;QD=15.79;ReadPosRankSum=-2.832;VQSLOD=2.8654;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:18:14.15:299,14,0	0/0:3,0:3:8.95:0,9,66	0/0:19,0:21:9.98:0,10,111	0/0:14,0:14:14.67:0,15,99	0/0:27,0:27:65.43:0,65,469	0/0:17,0:19:33.33:0,33,314	0/0:13,0:13:35.80:0,36,263	1/1:9,18:27:34.89:450,35,0	0/0:16,0:17:40.74:0,41,286	0/0:18,0:20:42.80:0,43,296	0/0:14,0:14:35.54:0,36,252	0/0:16,0:16:41.73:0,42,304	0/0:24,0:24:59.63:0,60,436	0/0:17,0:17:38.72:0,39,283	0/0:21,0:21:56.51:0,57,401	1/1:3,17:20:39.06:380,39,0	0/0:21,0:23:60.72:0,61,424	0/0:23,0:25:42.17:0,42,400	0/0:15,0:20:43.44:0,43,268	0/0:25,2:27:2.04:0,2,275	0/0:15,0:15:26.82:0,27,197	0/0:17,0:17:31.69:0,32,211	0/0:23,0:23:56.62:0,57,413	0/0:6,0:7:19.92:0,20,135	0/0:18,0:18:44.53:0,45,315	0/0:26,0:26:26.80:0,27,349	0/0:20,1:21:15.53:0,16,277	1/1:0,4:4:12.02:115,12,0
chr10	96250126	.	T	TGCCCAGCC	53012.13	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-10.852;DP=652;FS=16.795;HRun=0;HaplotypeScore=122.3589;InbreedingCoeff=0.9690;MQ=82.43;MQ0=0;MQRankSum=-12.446;QD=94.33;ReadPosRankSum=3.366;VQSLOD=4.3773;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:27:48.16:2214,48,0	1/1:0,10:10:30.10:1385,30,0	0/0:31,0:31:80.76:0,81,2127	0/0:22,0:22:55.63:0,56,1542	1/1:1,20:28:66.18:2741,66,0	1/1:2,13:20:36.12:1661,36,0	1/1:2,13:22:39.13:1719,39,0	1/1:0,8:23:69.18:2078,69,0	1/1:1,18:26:51.17:2354,51,0	1/1:0,21:30:78.22:3293,78,0	1/1:0,10:16:27.09:1245,27,0	1/1:1,23:27:66.23:3046,66,0	1/1:1,21:31:66.23:3042,66,0	1/1:0,22:29:63.22:2906,63,0	1/1:0,26:32:75.26:3460,75,0	1/1:2,17:22:48.16:2215,48,0	0/0:23,0:23:69.24:0,69,1878	0/0:14,0:14:42.14:0,42,1267	1/1:0,12:22:66.18:2552,66,0	1/1:1,16:27:66.22:2438,66,0	1/1:3,9:21:27.09:1246,27,0	1/1:1,17:22:48.16:2212,48,0	1/1:2,9:22:23.77:1105,24,0	1/1:1,12:16:21.07:968,21,0	1/1:0,12:14:36.12:1662,36,0	1/1:0,22:33:99:3751,99,0	1/1:0,22:30:75.26:3444,75,0	1/1:0,10:10:6.02:277,6,0
chr10	96250637	.	A	AG	3036.64	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-12.069;DP=689;FS=16.654;HRun=6;HaplotypeScore=64.0051;InbreedingCoeff=0.9982;MQ=74.48;MQ0=0;MQRankSum=-0.728;QD=30.07;ReadPosRankSum=-2.159;VQSLOD=1.7117;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:28:69.05:845,69,0	0/0:13,0:13:39.09:0,39,397	0/0:39,0:31:65.55:0,66,700	0/0:24,0:20:25.79:0,26,343	0/0:36,0:36:99:0,99,1009	0/0:26,0:25:69.14:0,69,697	0/0:31,0:31:87.15:0,87,871	1/1:4,27:31:78.17:918,78,0	0/0:19,0:19:51.11:0,51,520	0/0:30,0:30:87.19:0,87,887	0/0:25,0:25:69.14:0,69,699	0/0:25,0:25:66.15:0,66,673	0/0:16,0:16:42.05:0,42,418	0/0:23,0:23:63.14:0,63,643	0/0:30,0:30:87.20:0,87,887	1/1:1,30:31:81.26:1019,81,0	0/0:25,0:25:72.13:0,72,725	0/0:12,0:12:36.08:0,36,367	0/0:26,0:26:54.07:0,54,542	0/0:28,0:28:81.18:0,81,825	0/0:26,0:26:66.13:0,66,666	0/0:9,0:9:21.04:0,21,214	0/0:17,0:17:48.11:0,48,490	0/0:14,0:14:30.06:0,30,302	0/0:22,0:22:63.12:0,63,634	0/0:37,0:37:99:0,102,1039	0/0:35,0:35:99:0,102,1026	1/1:0,11:11:33.11:415,33,0
chr10	96250884	.	TA	T	3513.54	PASS	AB=0.727;AC=23;AF=0.411;AN=56;BaseQRankSum=10.337;DP=541;FS=5.689;HRun=11;HaplotypeScore=64.0401;InbreedingCoeff=0.9164;MQ=66.38;MQ0=2;MQRankSum=1.296;QD=17.93;ReadPosRankSum=2.951;VQSLOD=4.8157;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.11:0,63,652	0/0:9,0:9:18.05:0,18,192	0/0:25,0:18:14.42:0,14,163	0/0:13,1:11:13.19:0,13,132	0/0:34,0:34:84.14:0,84,868	1/1:2,16:19:46.98:374,47,0	1/1:3,6:9:17.97:148,18,0	0/0:25,0:25:57.10:0,57,589	1/1:3,11:14:29.96:246,30,0	1/1:1,24:25:62.90:514,63,0	1/1:5,16:21:41.93:344,42,0	1/1:1,17:19:46.98:375,47,0	1/1:1,16:17:41.95:345,42,0	1/1:2,16:18:44.91:364,45,0	0/0:23,1:24:35.50:0,36,575	0/0:18,1:19:26.49:0,26,481	0/0:22,0:23:65.97:0,66,670	0/0:29,0:29:62.54:0,63,617	0/0:23,0:24:58.39:0,58,610	0/0:23,0:23:29.97:0,30,506	0/1:5,3:8:52.92:53,0,83	1/1:2,14:16:38.81:302,39,0	1/1:4,16:21:37.85:301,38,0	1/1:1,8:9:17.98:148,18,0	0/0:22,0:22:54.12:0,54,568	0/0:19,1:20:32.49:0,32,544	0/0:21,1:22:38.56:0,39,586	0/0:10,0:10:29.73:0,30,290
chr10	96251308	.	ATTC	A	10229.04	PASS	AC=28;AF=0.519;AN=54;BaseQRankSum=14.535;DP=506;FS=23.467;HRun=0;HaplotypeScore=75.0021;InbreedingCoeff=0.9920;MQ=72.74;MQ0=0;MQRankSum=-2.676;QD=39.96;ReadPosRankSum=0.713;VQSLOD=3.5445;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:51.13:780,51,0	0/0:4,0:4:12.04:0,12,265	0/0:7,0:7:15.05:0,15,312	0/0:10,0:10:27.09:0,27,577	0/0:24,0:24:72.25:0,72,1590	1/1:1,27:28:66.23:1060,66,0	1/1:1,8:9:21.07:337,21,0	1/1:2,28:30:84.26:1297,84,0	1/1:1,17:18:42.14:675,42,0	1/1:2,21:23:63.17:953,63,0	1/1:0,16:16:42.06:595,42,0	1/1:2,14:16:39.13:627,39,0	1/1:1,14:15:39.13:627,39,0	1/1:0,12:12:33.11:530,33,0	0/0:21,0:21:60.21:0,60,1325	1/1:0,19:19:51.17:819,51,0	0/0:23,0:23:51.18:0,51,1111	0/0:25,0:25:75.26:0,75,1652	0/0:28,0:28:75.26:0,75,1656	0/0:21,0:21:60.19:0,60,1284	0/0:13,0:13:36.12:0,36,776	1/1:2,18:20:54.18:868,54,0	1/1:0,16:16:45.15:723,45,0	1/1:0,13:13:21.07:338,21,0	0/0:26,0:26:78.27:0,78,1722	0/0:21,0:21:60.21:0,60,1325	0/0:25,0:25:69.24:0,69,1504	./.
chr10	96252501	.	G	GA	3018.15	PASS	AB=0.777;AC=29;AF=0.537;AN=54;BaseQRankSum=-2.649;DP=485;FS=3.084;HRun=13;HaplotypeScore=94.1992;InbreedingCoeff=0.2637;MQ=71.39;MQ0=5;MQRankSum=-2.501;QD=9.96;ReadPosRankSum=-1.968;VQSLOD=2.8046;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,6:18:11.97:220,12,0	1/1:3,6:9:0.40:139,0,0	0/0:45,0:17:7.68:0,8,53	0/0:42,1:17:14.11:0,14,77	0/1:25,9:34:84.11:281,0,84	1/1:8,5:14:5.53:204,6,0	0/1:4,1:5:11.59:42,0,12	0/1:8,10:18:5.15:232,0,5	1/1:6,6:12:8.92:203,9,0	1/1:11,11:22:13.28:241,13,0	1/1:13,10:23:15.33:267,15,0	1/1:4,4:9:5.17:78,5,0	0/1:5,2:7:5.68:78,0,6	0/1:12,3:15:12.99:89,0,13	1/1:8,11:19:35.83:292,36,0	1/1:12,10:22:6.22:190,6,0	0/0:18,0:18:22.43:0,22,141	0/0:10,0:10:14.80:0,15,103	0/0:11,0:13:28.44:0,28,164	0/0:19,0:19:38.62:0,39,265	0/0:5,0:5:11.71:0,12,73	0/1:4,2:6:8.62:63,0,9	0/1:9,4:14:21.90:81,0,22	./.	0/1:16,6:25:40.59:197,0,41	1/1:17,6:23:12.40:245,12,0	0/0:21,0:22:30.55:0,31,210	0/1:7,1:8:8.64:56,0,9
chr10	96256076	.	AT	A	17469.07	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=3.530;DP=540;FS=1.797;HRun=2;HaplotypeScore=54.8382;InbreedingCoeff=0.9704;MQ=69.78;MQ0=0;MQRankSum=-3.112;QD=35.87;ReadPosRankSum=1.300;VQSLOD=5.2572;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:48.16:620,48,0	1/1:1,5:6:12.04:156,12,0	0/0:9,0:9:27.09:0,27,394	0/0:5,0:5:15.05:0,15,225	1/1:0,38:38:99:1357,108,0	1/1:0,20:20:60.19:778,60,0	1/1:0,15:15:45.15:584,45,0	1/1:1,31:32:90.29:1165,90,0	1/1:0,15:15:45.15:584,45,0	1/1:0,26:26:78.23:984,78,0	1/1:1,22:23:63.20:817,63,0	1/1:0,13:13:36.12:467,36,0	1/1:0,25:25:69.22:896,69,0	1/1:0,17:17:45.15:584,45,0	1/1:1,27:28:75.24:974,75,0	1/1:3,22:25:66.21:857,66,0	0/0:23,0:23:69.22:0,69,1013	0/0:16,0:16:45.15:0,45,674	1/1:1,20:21:60.16:749,60,0	1/1:1,35:36:99:1264,102,0	1/1:0,10:10:30.10:390,30,0	1/1:1,14:15:39.13:506,39,0	1/1:0,21:21:51.17:662,51,0	1/1:0,12:12:36.12:467,36,0	1/1:0,10:10:27.09:351,27,0	1/1:0,27:27:81.26:1051,81,0	1/1:0,30:30:84.27:1088,84,0	1/1:0,4:4:9.03:116,9,0
chr10	96256762	.	CGT	C	1539.54	PASS	AB=0.844;AC=20;AF=0.417;AN=48;BaseQRankSum=-1.435;DP=631;FS=7.166;HRun=0;HaplotypeScore=90.0785;InbreedingCoeff=0.3941;MQ=60.02;MQ0=20;MQRankSum=1.510;QD=5.11;ReadPosRankSum=-0.083;VQSLOD=2.1309;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:27:6.02:0,6,80	0/0:3,0:3:0.47:0,0,1	./.	./.	0/0:25,0:23:11.64:0,12,108	0/1:10,3:12:26.31:26,0,38	1/1:29,4:34:47.34:441,47,0	./.	0/1:24,11:34:19.44:202,0,19	1/1:22,5:27:9.02:97,9,0	1/1:8,4:12:6.02:65,6,0	1/1:14,5:19:6.01:63,6,0	1/1:10,5:15:12.03:129,12,0	1/1:26,3:30:17.88:175,18,0	0/0:22,0:24:9:0,9,78	0/0:16,0:24:18:0,18,166	0/0:31,0:41:30.05:0,30,336	0/1:28,2:31:76.84:77,0,255	0/0:12,0:12:5.98:0,6,48	0/0:9,0:9:0:0,0,0	0/0:44,0:40:12:0,12,112	0/1:12,6:17:29.31:114,0,29	1/1:13,3:16:11.86:111,12,0	0/1:19,5:22:8.66:201,0,9	0/1:26,0:25:0:0,0,0	0/0:21,0:24:25.19:0,25,214	0/0:24,0:28:15.87:0,16,142	./.
chr10	96256997	.	AAAG	A	10542.13	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.595;DP=653;FS=3.539;HRun=0;HaplotypeScore=106.2712;InbreedingCoeff=0.9914;MQ=74.94;MQ0=0;MQRankSum=-4.138;QD=42.68;ReadPosRankSum=2.796;VQSLOD=6.5103;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.29:0,84,1902	0/0:3,0:3:9.03:0,9,203	0/0:19,0:19:45.15:0,45,987	0/0:13,0:13:27.09:0,27,605	0/0:26,0:25:75.26:0,75,1697	1/1:0,26:26:69.24:1149,69,0	1/1:1,13:14:36.12:600,36,0	0/0:36,0:36:99:0,102,2311	1/1:2,18:20:48.16:800,48,0	1/1:4,31:35:93.32:1547,93,0	1/1:0,24:24:66.18:1060,66,0	1/1:2,12:14:33.11:548,33,0	1/1:2,30:32:81.28:1345,81,0	1/1:1,15:16:45.15:750,45,0	0/0:31,0:31:90.27:0,90,1974	0/0:30,0:30:90.30:0,90,1975	0/0:27,0:27:78.27:0,78,1750	0/0:20,0:20:57.20:0,57,1271	0/0:32,0:32:96.33:0,96,2161	0/0:19,0:19:54.19:0,54,1213	0/0:29,0:29:78.27:0,78,1768	1/1:5,17:22:48.16:800,48,0	1/1:1,30:31:83.91:1395,84,0	1/1:1,12:13:33.11:550,33,0	0/0:23,0:23:66.23:0,66,1495	0/0:27,1:28:34.30:0,34,1777	0/0:29,0:28:87.30:0,87,1944	0/0:12,0:12:36.12:0,36,816
chr10	96258442	.	C	CA	1638.24	PASS	AB=0.664;AC=35;AF=0.625;AN=56;BaseQRankSum=0.668;DP=398;FS=2.434;HRun=15;HaplotypeScore=62.4739;InbreedingCoeff=0.3978;MQ=56.96;MQ0=9;MQRankSum=-2.234;QD=5.89;ReadPosRankSum=-3.602;VQSLOD=1.5817;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:27:37.51:0,38,118	1/1:3,0:4:10.09:57,10,0	1/1:16,0:8:2.90:17,3,0	0/0:6,0:4:0.42:0,0,0	1/1:8,2:15:8.70:49,9,0	0/1:4,9:15:1.02:117,0,1	0/1:4,6:12:1.17:106,0,1	0/0:7,0:27:35.19:0,35,101	0/1:10,8:18:6.22:159,0,6	0/1:13,5:18:13.11:121,0,13	0/1:10,8:20:10.20:217,0,10	1/1:1,3:6:11.67:90,12,0	1/1:5,5:10:3:25,3,0	1/1:8,2:9:3:25,3,0	1/1:8,0:13:14.20:71,14,0	0/0:0,0:6:12.22:0,12,35	0/0:21,2:26:14.71:0,15,289	0/0:18,0:18:32.22:0,32,194	1/1:9,0:16:22.68:113,23,0	1/1:10,0:11:9.39:43,9,0	1/1:4,0:5:4.66:20,5,0	1/1:4,7:10:14.94:120,15,0	0/1:8,5:12:8.67:42,0,9	0/1:3,7:11:6.41:47,0,6	1/1:9,0:16:25.43:120,25,0	1/1:11,0:16:24:120,24,0	1/1:9,0:14:23.58:135,24,0	0/0:3,0:8:8.12:0,8,23
chr10	96258661	.	T	TA	5562.66	PASS	AB=0.839;AC=49;AF=0.875;AN=56;BaseQRankSum=1.118;DP=459;FS=3.058;HRun=12;HaplotypeScore=79.1434;InbreedingCoeff=0.4567;MQ=70.05;MQ0=0;MQRankSum=-1.983;QD=13.15;ReadPosRankSum=-2.244;VQSLOD=4.5315;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,12:19:24.35:220,24,0	1/1:2,0:5:11.42:59,11,0	0/1:13,1:13:36.21:36,0,50	0/1:11,0:8:28.51:29,0,30	1/1:8,0:29:56.35:294,56,0	1/1:4,11:16:16.99:313,17,0	1/1:1,6:8:20.87:189,21,0	1/1:4,1:24:51.51:274,52,0	1/1:1,11:12:27.04:263,27,0	1/1:7,17:24:45.06:434,45,0	1/1:9,14:23:23.10:373,23,0	1/1:1,15:16:36.06:350,36,0	1/1:4,10:14:36.05:347,36,0	1/1:3,6:9:18.50:176,19,0	1/1:8,0:17:25.57:129,26,0	1/1:3,12:15:36.06:350,36,0	0/0:20,0:20:50.66:0,51,369	0/0:16,0:16:32.77:0,33,241	1/1:11,1:18:19.37:82,19,0	1/1:4,0:16:34.62:194,35,0	1/1:1,0:13:17.16:91,17,0	1/1:1,7:8:15.02:146,15,0	1/1:3,10:13:2.13:182,2,0	0/1:3,8:11:16.78:177,0,17	1/1:6,1:12:22.44:108,22,0	1/1:12,0:34:70.11:391,70,0	1/1:9,1:21:25.79:136,26,0	1/1:2,0:19:42.70:217,43,0
chr10	96260500	.	C	CA	10660.76	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=3.801;DP=560;FS=15.240;HRun=2;HaplotypeScore=87.8233;InbreedingCoeff=0.9623;MQ=69.49;MQ0=0;MQRankSum=-1.418;QD=20.94;ReadPosRankSum=0.712;VQSLOD=3.5675;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:21.49:207,21,0	1/1:9,0:9:11.98:114,12,0	0/0:14,0:11:18.42:0,18,205	0/0:8,0:6:8.14:0,8,87	1/1:37,0:37:98.50:943,99,0	1/1:17,3:19:45.08:492,45,0	1/1:14,1:15:27.07:294,27,0	1/1:23,0:23:64.09:555,64,0	1/1:16,1:17:24.06:260,24,0	1/1:22,1:22:62.94:585,63,0	1/1:20,4:25:60.07:667,60,0	1/1:21,1:21:39.10:421,39,0	1/1:20,1:21:48.10:489,48,0	1/1:16,1:17:32.75:352,33,0	1/1:18,1:19:18.05:201,18,0	1/1:16,0:16:30.06:300,30,0	0/0:13,0:13:35.97:0,36,380	0/0:16,0:16:48.08:0,48,536	1/1:22,0:22:65.91:623,66,0	1/1:33,0:33:82.32:707,82,0	1/1:18,0:18:24.06:252,24,0	1/1:13,1:14:39.02:409,39,0	1/1:22,0:22:42.02:438,42,0	1/1:14,2:16:31.63:342,32,0	1/1:27,0:27:39.56:404,40,0	1/1:29,1:30:84.06:834,84,0	1/1:36,0:36:57.51:582,58,0	1/1:9,0:9:18.04:188,18,0
chr10	96260502	.	A	AATT	18055.73	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-1.013;DP=598;FS=9.715;HRun=0;HaplotypeScore=95.2748;InbreedingCoeff=0.9646;MQ=67.82;MQ0=0;MQRankSum=-1.929;QD=33.07;ReadPosRankSum=0.945;VQSLOD=5.2111;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:21:33.06:623,33,0	1/1:1,5:9:11.99:192,12,0	0/0:14,0:11:18.44:0,18,233	0/0:7,0:5:8.13:0,8,93	1/1:1,29:39:99:1728,109,0	1/1:5,1:19:39.18:514,39,0	1/1:2,0:16:29.96:372,30,0	1/1:3,22:27:75.06:1176,75,0	1/1:1,1:17:23.97:326,24,0	1/1:2,1:24:68.47:728,68,0	1/1:8,3:25:43.37:759,43,0	1/1:2,1:22:39.02:538,39,0	1/1:3,0:25:51.16:660,51,0	1/1:1,0:19:32.67:412,33,0	1/1:3,15:20:21.04:431,21,0	1/1:0,13:17:30.10:631,30,0	0/0:13,0:13:38.82:0,39,529	0/0:18,0:18:47.97:0,48,735	1/1:1,18:24:70.58:1014,71,0	1/1:1,27:33:89.82:1491,90,0	1/1:1,13:19:24.97:484,25,0	1/1:1,0:15:41.89:489,42,0	1/1:0,1:21:42.05:558,42,0	1/1:3,0:17:32.63:396,33,0	1/1:1,24:29:42.14:929,42,0	1/1:5,26:37:99:1846,105,0	1/1:4,29:39:66.12:1390,66,0	1/1:0,7:9:18.06:368,18,0
chr10	96260665	.	GTTATCCTTTGACCCACCACGC	G	23405.95	PASS	AB=0.607;AC=29;AF=0.518;AN=56;BaseQRankSum=15.943;DP=512;FS=10.138;HRun=0;HaplotypeScore=287.0978;InbreedingCoeff=0.9120;MQ=97.16;MQ0=0;MQRankSum=-15.532;QD=112.53;ReadPosRankSum=6.250;VQSLOD=3.0432;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,11:15:18.06:1072,18,0	0/0:13,0:13:39.13:0,39,3660	0/0:27,0:27:77.94:0,78,5197	0/0:35,0:34:93.27:0,93,7161	0/0:22,0:22:63.22:0,63,6101	1/1:5,19:24:45.15:2679,45,0	1/1:1,6:7:12.04:646,12,0	1/1:5,6:11:18.06:860,18,0	1/1:1,8:9:18.06:1072,18,0	0/1:6,11:17:99:1680,0,240	1/1:4,16:20:42.14:2500,42,0	1/1:1,13:13:30.10:1786,30,0	1/1:3,17:20:36.12:2139,36,0	1/1:1,10:11:24.08:1428,24,0	0/0:23,0:23:69.24:0,69,6461	1/1:3,8:12:27.09:1608,27,0	0/0:24,0:24:72.21:0,72,6577	0/0:12,0:12:33.11:0,33,2965	0/0:21,0:21:60.17:0,60,4699	0/0:21,0:21:60.21:0,60,5309	0/0:30,0:30:90.30:0,90,8343	1/1:2,16:18:45.15:2679,45,0	1/1:3,12:15:33.11:1956,33,0	1/1:5,4:9:12.04:586,12,0	0/0:20,0:20:60.21:0,60,5360	0/0:27,0:27:81.26:0,81,6921	0/0:29,0:29:87.28:0,87,7783	1/1:0,6:6:12.04:715,12,0
chr10	96261229	.	A	AT	2348.08	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.670;DP=571;FS=3.347;HRun=1;HaplotypeScore=51.8535;InbreedingCoeff=0.9545;MQ=80.57;MQ0=0;MQRankSum=-3.732;QD=39.80;ReadPosRankSum=0.213;VQSLOD=4.0478;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:37:99:1526,102,0	0/0:9,0:9:24.08:0,24,312	0/0:17,0:17:45.14:0,45,562	0/0:11,0:11:33.08:0,33,409	0/0:27,0:27:81.26:0,81,1039	0/0:15,0:15:45.15:0,45,583	0/0:4,0:4:12.04:0,12,156	0/0:40,0:40:99:0,111,1428	0/0:15,0:15:45.13:0,45,568	0/0:26,0:26:78.24:0,78,1000	0/0:12,0:12:36.12:0,36,467	0/0:23,0:23:69.19:0,69,867	0/0:18,0:18:54.16:0,54,687	0/0:14,0:14:39.13:0,39,505	0/0:21,0:21:60.19:0,60,779	1/1:0,22:22:63.21:944,63,0	0/0:20,0:20:60.12:0,60,742	0/0:20,0:20:60.19:0,60,777	0/0:18,0:18:51.14:0,51,622	0/0:26,0:26:75.23:0,75,959	0/0:33,0:33:99:0,99,1270	0/0:10,0:10:30.07:0,30,362	0/0:19,0:19:54.18:0,54,699	0/0:23,0:23:63.20:0,63,818	0/0:30,0:30:90.29:0,90,1167	0/0:31,0:31:87.28:0,87,1130	0/0:27,0:27:81.25:0,81,1035	0/0:3,0:3:9.03:0,9,117
chr10	96263482	.	A	AT	7519.16	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-16.201;DP=696;FS=0.000;HRun=8;HaplotypeScore=63.6041;InbreedingCoeff=0.9991;MQ=82.31;MQ0=0;MQRankSum=-1.982;QD=29.14;ReadPosRankSum=2.723;VQSLOD=4.9870;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:27.01:0,27,247	0/0:15,0:15:45.01:0,45,407	0/0:22,0:22:44.93:0,45,393	0/0:18,0:18:39.82:0,40,327	0/0:29,0:29:80.99:0,81,730	1/1:2,29:31:81.24:935,81,0	1/1:3,11:14:30.09:346,30,0	0/0:38,0:38:90:0,90,817	1/1:1,8:9:21.06:242,21,0	1/1:5,22:27:69.20:788,69,0	1/1:2,16:18:45.13:519,45,0	1/1:0,27:27:69.21:796,69,0	1/1:5,20:25:60.18:692,60,0	1/1:1,22:23:63.19:727,63,0	0/0:28,0:28:75.04:0,75,686	0/0:26,1:27:37.35:0,37,580	0/0:25,0:25:40.58:0,41,551	0/0:17,0:17:41.92:0,42,363	0/0:31,0:31:75.02:0,75,685	0/0:30,0:30:78.01:0,78,711	0/0:34,0:34:90.03:0,90,818	1/1:2,28:31:78.06:880,78,0	1/1:1,33:34:87.26:1004,87,0	1/1:1,18:19:51.15:589,51,0	0/0:26,0:26:72.03:0,72,659	0/0:31,0:31:84.03:0,84,765	0/0:40,0:39:99:0,122,1096	0/0:16,0:16:39.49:0,39,357
chr10	96264545	.	AC	A	7668.80	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=10.338;DP=532;FS=11.782;HRun=2;HaplotypeScore=55.0150;InbreedingCoeff=0.9991;MQ=80.46;MQ0=0;MQRankSum=-3.103;QD=35.67;ReadPosRankSum=3.336;VQSLOD=4.4457;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.14:0,42,629	0/0:7,0:7:21.07:0,21,310	0/0:14,0:14:39.12:0,39,536	0/0:20,0:20:54.07:0,54,742	0/0:22,0:22:54.18:0,54,794	1/1:0,22:22:63.20:817,63,0	1/1:0,22:22:63.20:817,63,0	0/0:22,0:22:63.20:0,63,914	1/1:0,19:19:57.19:740,57,0	1/1:0,27:26:78.25:1011,78,0	1/1:0,17:17:45.15:584,45,0	1/1:0,23:23:57.19:740,57,0	1/1:0,24:22:63.20:818,63,0	1/1:0,19:19:51.17:662,51,0	0/0:24,0:24:72.23:0,72,1059	0/0:22,0:22:63.21:0,63,944	0/0:29,0:29:87.29:0,87,1288	0/0:19,0:19:54.18:0,54,804	0/0:19,0:19:51.17:0,51,757	0/0:20,0:20:54.17:0,54,776	0/0:18,0:18:51.17:0,51,753	1/1:1,11:12:30.10:390,30,0	1/1:1,18:19:54.18:701,54,0	1/1:0,11:10:30.10:389,30,0	0/0:14,0:14:36.10:0,36,516	0/0:14,0:14:42.14:0,42,613	0/0:29,0:29:87.25:0,87,1274	0/0:9,0:9:27.09:0,27,405
chr10	96266253	.	A	AT	645.84	PASS	AB=0.955;AC=6;AF=0.107;AN=56;BaseQRankSum=-6.471;DP=491;FS=4.680;HRun=11;HaplotypeScore=49.5930;InbreedingCoeff=0.6480;MQ=71.96;MQ0=0;MQRankSum=-1.488;QD=8.18;ReadPosRankSum=-0.223;VQSLOD=1.7762;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:36.07:365,36,0	0/0:9,0:9:23.91:0,24,186	0/1:28,0:17:8.75:9,0,51	0/0:8,0:7:8.75:0,9,64	0/0:32,1:33:41.21:0,41,499	0/0:14,0:14:35.84:0,36,276	0/1:9,1:10:6.53:7,0,138	0/0:21,0:21:49.82:0,50,372	0/0:17,0:17:44.80:0,45,346	0/0:17,0:17:38.81:0,39,302	0/0:17,0:19:48.90:0,49,360	0/0:15,0:16:43.87:0,44,331	0/0:13,0:13:38.82:0,39,296	0/0:12,0:14:27.96:0,28,198	0/0:14,0:14:32.84:0,33,255	1/1:5,14:19:39.08:396,39,0	0/0:17,0:19:45.89:0,46,337	0/0:18,0:18:38.81:0,39,298	0/0:20,0:20:50.78:0,51,392	0/0:23,0:23:59.76:0,60,464	0/0:10,0:11:22.95:0,23,168	0/0:13,0:14:25.91:0,26,192	0/0:25,0:25:35.95:0,36,417	0/0:9,0:9:23.87:0,24,181	0/0:26,0:26:68.71:0,69,533	0/0:16,0:16:38.82:0,39,302	0/0:25,0:26:64.72:0,65,489	0/0:9,0:9:23.91:0,24,186
chr10	96266370	.	CT	C	7582.30	PASS	AB=0.950;AC=47;AF=0.870;AN=54;BaseQRankSum=1.427;DP=461;FS=0.584;HRun=10;HaplotypeScore=51.3450;InbreedingCoeff=0.8750;MQ=80.04;MQ0=1;MQRankSum=0.695;QD=18.68;ReadPosRankSum=4.081;VQSLOD=5.4037;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:77.98:677,78,0	./.	0/1:18,1:17:1.19:1,0,133	0/0:14,0:14:21.18:0,21,180	1/1:1,21:23:64.96:540,65,0	1/1:2,7:9:14.99:130,15,0	1/1:4,11:15:20.99:182,21,0	1/1:7,13:20:8.79:302,9,0	1/1:3,7:10:20.99:182,21,0	1/1:0,20:20:56.98:495,57,0	1/1:3,14:17:38.80:315,39,0	1/1:1,20:21:47.99:417,48,0	1/1:2,9:11:23.99:207,24,0	1/1:2,10:12:26.98:234,27,0	1/1:2,11:13:32.98:287,33,0	1/1:2,17:19:38.98:339,39,0	0/0:24,0:24:45.11:0,45,488	0/0:17,0:16:42.08:0,42,451	1/1:5,17:22:50.98:443,51,0	1/1:3,20:23:50.96:443,51,0	1/1:4,15:19:32.98:286,33,0	1/1:2,7:9:17.97:156,18,0	1/1:0,14:14:35.92:305,36,0	1/1:3,4:7:11.99:104,12,0	1/1:3,16:19:41.99:365,42,0	1/1:6,14:20:41.98:365,42,0	1/1:1,21:22:59.99:521,60,0	1/1:1,11:12:32.99:287,33,0
chr10	96267203	.	GACACACAC	G	2341.35	PASS	AB=0.846;AC=20;AF=0.357;AN=56;BaseQRankSum=2.778;DP=685;FS=5.230;HRun=0;HaplotypeScore=209.2935;InbreedingCoeff=0.6337;MQ=55.42;MQ0=34;MQRankSum=-3.165;QD=8.80;ReadPosRankSum=-0.941;VQSLOD=2.0800;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:3.01:0,3,32	0/0:6,0:6:5.81:0,6,120	0/0:46,0:16:6.02:0,6,111	0/0:58,0:26:3.90:0,4,71	0/0:25,0:25:18.06:0,18,576	1/1:8,15:23:1.06:2,1,0	1/1:25,4:28:9.44:72,9,0	0/0:32,0:29:21.71:0,22,271	1/1:10,11:20:6.02:146,6,0	1/1:17,12:29:42.06:751,42,0	0/0:5,12:19:0:0,0,0	1/1:17,4:22:30.55:506,31,0	1/1:8,22:29:28.34:576,28,0	0/1:19,1:22:14.25:125,0,14	0/0:26,0:25:14.88:0,15,414	1/1:27,0:29:16.25:253,16,0	0/0:25,0:24:42.14:0,42,852	0/0:14,0:13:15.05:0,15,402	0/0:15,0:13:12.03:0,12,265	0/0:20,0:20:12.01:0,12,236	0/0:23,0:19:18.04:0,18,407	1/1:11,13:23:0.47:1,0,0	1/1:10,9:22:5.99:50,6,0	0/1:10,1:12:10.90:39,0,11	0/0:21,0:21:24.08:0,24,801	0/0:24,0:22:48.16:0,48,1047	0/0:21,0:20:39.24:0,39,758	0/0:7,0:7:13.23:0,13,269
chr10	96267227	.	CACACACACACAG	C	1569.12	PASS	AB=0.996;AC=13;AF=0.232;AN=56;BaseQRankSum=3.366;DP=655;FS=7.971;HRun=0;HaplotypeScore=232.6837;InbreedingCoeff=0.0509;MQ=43.34;MQ0=30;MQRankSum=-2.654;QD=5.53;ReadPosRankSum=1.483;VQSLOD=1.1784;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,28:35:3.01:0,3,34	0/0:6,0:6:10.45:0,10,200	0/0:10,0:2:6.02:0,6,154	0/0:22,0:5:10.26:0,10,159	0/0:31,0:31:29.06:0,29,795	0/1:26,0:26:7.97:8,0,89	0/0:31,0:28:13.15:0,13,119	0/0:28,0:24:60.78:0,61,659	0/1:21,0:20:40.44:40,0,67	0/1:29,1:28:89.83:562,0,90	0/1:21,0:20:15.44:15,0,40	1/1:22,0:22:9.73:253,10,0	0/1:33,0:32:99:226,0,102	0/1:19,0:19:99:144,0,123	0/0:32,0:31:27.78:0,28,623	1/1:6,30:39:18.06:400,18,0	0/1:29,0:27:28.10:28,0,1159	0/0:14,0:13:15.94:0,16,553	0/0:13,0:12:9.57:0,10,367	0/0:22,0:22:23.23:0,23,369	0/0:22,0:17:18.95:0,19,547	0/1:24,0:22:15.50:41,0,15	0/0:25,0:24:12.55:0,13,116	0/1:20,0:19:9.87:10,0,99	0/0:18,0:18:27.09:0,27,996	0/0:24,0:24:57.23:0,57,1468	0/0:26,0:25:22.17:0,22,1018	0/0:11,0:11:29.05:0,29,659
chr10	96267229	.	CACACACACAG	C	1978.75	PASS	AB=0.959;AC=15;AF=0.268;AN=56;BaseQRankSum=2.157;DP=640;FS=1.808;HRun=0;HaplotypeScore=214.4565;InbreedingCoeff=-0.1174;MQ=43.43;MQ0=26;MQRankSum=-4.162;QD=5.87;ReadPosRankSum=2.103;VQSLOD=2.6698;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:3.01:0,3,32	0/0:6,0:6:10.14:0,10,133	0/0:8,0:2:6.02:0,6,111	0/0:16,0:3:3.90:0,4,70	0/0:31,0:31:25.30:0,25,615	0/1:28,0:28:25.13:25,0,84	0/1:29,0:26:51.27:51,0,62	0/0:27,0:23:42.44:0,42,407	0/1:20,0:20:65.81:83,0,66	0/1:29,0:27:60.31:733,0,60	0/1:20,1:20:18.43:18,0,20	1/1:21,2:23:1.02:276,1,0	0/1:31,0:30:90.17:367,0,90	0/1:8,10:18:86.07:114,0,86	0/0:32,0:31:27.12:0,27,474	1/1:38,0:39:18.01:288,18,0	0/1:31,0:29:81.67:82,0,821	0/0:14,0:13:15.94:0,16,426	0/0:12,0:12:6.57:0,7,284	0/0:22,0:22:23.17:0,23,320	0/0:22,0:17:18.51:0,19,408	0/1:23,0:21:36.46:37,0,36	0/1:25,0:24:28.98:29,0,112	0/1:19,0:18:33.24:33,0,71	0/0:17,0:17:26.88:0,27,806	0/0:24,0:25:59.69:0,60,1179	0/0:25,0:24:10.34:0,10,783	0/0:11,0:11:27.01:0,27,526
chr10	96267237	.	CAG	C	1051.62	PASS	AB=0.958;AC=27;AF=0.519;AN=52;BaseQRankSum=4.030;DP=606;FS=33.101;HRun=0;HaplotypeScore=167.7411;InbreedingCoeff=0.1344;MQ=43.88;MQ0=16;MQRankSum=1.991;QD=2.52;ReadPosRankSum=1.239;VQSLOD=1.2063;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:5,0:5:5.85:34,6,0	./.	0/0:3,0:3:8.87:0,9,61	1/1:29,1:32:0.89:90,1,0	0/1:26,0:26:21.16:21,0,107	0/0:24,0:21:14.93:0,15,118	0/0:32,0:28:26.71:0,27,181	0/0:18,0:17:9.32:0,9,80	0/1:28,1:28:89.93:90,0,191	0/1:21,0:20:15.43:15,0,41	0/1:20,0:20:10.33:10,0,118	0/1:32,0:32:20.44:20,0,128	0/0:20,0:20:17.71:0,18,134	1/1:26,3:31:20.55:136,21,0	1/1:38,1:39:8.90:65,9,0	1/1:25,1:25:2.90:267,3,0	1/1:6,8:13:2.13:32,2,0	1/1:10,0:11:8.52:43,9,0	0/1:20,0:21:24.87:57,0,25	1/1:19,0:14:2.90:16,3,0	0/1:24,0:23:27.87:28,0,101	0/0:24,0:23:17.97:0,18,146	0/0:21,0:20:12.36:0,12,90	0/1:15,1:17:17.63:18,0,41	1/1:23,0:23:12.28:152,12,0	0/1:19,1:24:20.27:127,0,20	0/0:10,0:10:12.51:0,13,169
chr10	96270297	.	CT	C	3954.31	PASS	AB=0.744;AC=29;AF=0.518;AN=56;BaseQRankSum=8.872;DP=595;FS=10.359;HRun=12;HaplotypeScore=69.5178;InbreedingCoeff=0.6443;MQ=75.10;MQ0=0;MQRankSum=-0.723;QD=10.75;ReadPosRankSum=3.514;VQSLOD=2.2841;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,48:59:69.19:701,69,0	0/0:7,0:7:15.02:0,15,145	0/1:18,0:17:20.15:20,0,167	0/1:15,0:13:12.47:12,0,130	0/0:12,0:14:20.58:0,21,292	0/1:8,22:31:29.69:293,0,30	1/1:8,19:27:4.55:322,5,0	1/1:10,0:28:35.49:102,35,0	1/1:4,11:17:30.96:221,31,0	1/1:2,19:22:52.79:397,53,0	0/1:3,7:11:22.27:119,0,22	1/1:2,12:14:15.97:175,16,0	1/1:6,16:22:32.82:254,33,0	0/1:6,8:15:1.55:159,0,2	0/0:22,1:26:38.86:0,39,582	1/1:2,21:24:36.61:402,37,0	0/0:21,1:22:41.49:0,41,477	0/0:22,2:28:17.61:0,18,543	0/0:18,1:19:30.82:0,31,319	0/0:16,1:18:24.69:0,25,412	0/0:20,0:20:13.21:0,13,237	1/1:2,10:12:14.53:154,15,0	1/1:2,13:15:20.51:159,21,0	1/1:4,22:26:29.32:411,29,0	0/0:20,1:21:24.71:0,25,381	0/0:23,0:26:53.90:0,54,510	0/0:25,0:25:48.04:0,48,456	1/1:2,0:11:18.33:53,18,0
chr10	96272498	.	TAA	T	1033.16	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=-0.160;DP=360;FS=20.907;HRun=15;HaplotypeScore=64.7932;InbreedingCoeff=0.6952;MQ=71.94;MQ0=4;MQRankSum=0.148;QD=6.98;ReadPosRankSum=0.927;VQSLOD=-0.6701;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:19:11.89:0,12,207	0/0:5,0:5:5.55:0,6,34	0/0:17,0:11:11.98:0,12,116	0/0:9,0:9:8.28:0,8,59	0/0:15,0:15:2.96:0,3,19	1/1:2,8:10:20.89:185,21,0	1/1:4,2:7:11.68:87,12,0	0/0:21,0:22:41.57:0,42,478	1/1:8,2:11:2.22:47,2,0	1/1:7,5:12:23.41:192,23,0	1/1:6,6:12:17.82:157,18,0	1/1:9,0:9:2.79:26,3,0	1/1:8,3:11:11.90:106,12,0	1/1:3,1:3:2.99:23,3,0	0/0:10,0:10:4.62:0,5,33	0/0:3,0:5:10.97:0,11,75	0/0:29,0:32:61.75:0,62,610	0/0:11,0:11:21.91:0,22,252	0/0:7,0:7:2.04:0,2,14	0/0:19,0:19:6.83:0,7,51	0/1:10,0:10:0.26:0,0,0	1/1:6,4:10:10.92:96,11,0	1/1:9,4:13:17.59:139,18,0	1/1:13,5:19:20.51:165,21,0	0/0:13,0:13:8.09:0,8,44	0/1:20,0:20:1.39:1,0,13	0/0:19,0:19:9.63:0,10,58	0/0:6,0:5:12.02:0,12,130
chr10	96272509	.	A	AG	671.15	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=-0.952;DP=350;FS=2.823;HRun=0;HaplotypeScore=62.8863;InbreedingCoeff=0.7323;MQ=55.97;MQ0=6;MQRankSum=-1.782;QD=7.80;ReadPosRankSum=2.352;VQSLOD=3.1326;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:59.49:0,59,452	1/1:4,0:4:8.79:54,9,0	0/0:12,0:6:14.56:0,15,119	0/1:7,0:5:3.86:4,0,22	1/1:0,10:10:2.06:7,2,0	0/0:14,0:14:38.43:0,38,247	0/0:12,0:12:26.64:0,27,174	0/0:22,0:22:58.70:0,59,481	0/0:13,0:13:29.76:0,30,213	0/0:12,0:12:32.57:0,33,216	0/0:19,0:19:44.54:0,45,312	0/0:13,0:13:23.73:0,24,160	0/0:14,0:14:38.58:0,39,261	0/0:7,0:6:11.85:0,12,79	1/1:9,0:9:23.25:138,23,0	0/0:7,0:6:14.88:0,15,105	0/0:31,0:31:60.28:0,60,654	0/0:9,0:9:23.25:0,23,261	0/1:3,0:3:3.05:38,0,3	1/1:14,0:14:1.89:130,2,0	1/1:4,0:4:1.65:22,2,0	0/0:10,0:10:22.55:0,23,143	0/0:20,0:19:28.52:0,29,187	0/0:16,0:16:35.53:0,36,233	1/1:1,7:8:3.85:55,4,0	1/1:14,0:14:29.49:216,29,0	1/1:13,0:13:24.99:186,25,0	0/0:6,0:5:14.98:0,15,137
chr10	96272550	.	A	AC	4629.41	PASS	AC=34;AF=1.000;AN=34;DP=167;FS=0.000;HRun=1;HaplotypeScore=32.0392;InbreedingCoeff=-0.0248;MQ=29.91;MQ0=6;QD=28.40;VQSLOD=4.3851;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:21.07:314,21,0	./.	./.	./.	./.	1/1:1,8:9:21.07:293,21,0	1/1:2,9:11:24.07:339,24,0	1/1:3,8:11:30.10:435,30,0	1/1:0,5:5:9.03:134,9,0	1/1:0,10:10:30.10:449,30,0	1/1:1,11:12:21.07:314,21,0	1/1:0,7:7:12.04:179,12,0	1/1:1,12:13:33.11:492,33,0	1/1:1,4:4:9.03:125,9,0	./.	1/1:1,5:5:11.91:179,12,0	1/1:3,14:15:30.10:449,30,0	1/1:0,5:5:12.04:180,12,0	./.	./.	./.	1/1:0,9:9:21.07:303,21,0	1/1:3,13:15:18.06:269,18,0	1/1:2,8:9:6.90:84,7,0	./.	./.	./.	1/1:0,2:2:6.02:90,6,0
chr10	96272607	.	A	ACC	33.46	PASS	AB=0.921;AC=8;AF=0.200;AN=40;BaseQRankSum=3.583;DP=254;FS=8.210;HRun=0;HaplotypeScore=76.4310;InbreedingCoeff=-0.1802;MQ=41.82;MQ0=12;MQRankSum=0.328;QD=0.29;ReadPosRankSum=-4.486;VQSLOD=-0.5874;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:10:19.56:0,20,187	./.	0/0:19,0:3:6.02:0,6,78	0/0:11,0:3:2.82:0,3,12	./.	0/0:10,0:9:16.29:0,16,200	0/1:5,0:5:3.33:3,0,130	0/1:34,1:33:12.90:13,0,710	0/1:13,1:14:13.45:13,0,215	0/1:14,0:13:9.25:9,0,227	0/0:18,0:18:15.88:0,16,330	0/1:11,1:12:37.69:44,0,38	0/0:12,0:12:26.72:0,27,294	0/0:6,0:6:8.86:0,9,92	./.	0/0:14,0:14:40.34:0,40,467	0/0:23,0:21:43.37:0,43,561	0/0:4,0:3:9.03:0,9,128	0/0:1,0:1:3.01:0,3,47	./.	./.	0/1:16,1:16:15.27:15,0,331	0/1:13,2:15:44:44,0,221	0/1:3,2:4:1.77:3,0,2	./.	./.	./.	0/0:8,0:5:15.04:0,15,188
chr10	96272692	.	G	GC	15757.42	PASS	AB=0.682;AC=54;AF=0.964;AN=56;BaseQRankSum=0.446;DP=410;FS=0.000;HRun=0;HaplotypeScore=160.6694;InbreedingCoeff=-0.0432;MQ=65.14;MQ0=0;MQRankSum=-2.201;QD=38.43;ReadPosRankSum=2.600;VQSLOD=4.1306;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,9:11:22.99:347,23,0	1/1:0,2:2:6.02:95,6,0	0/1:3,6:9:9.44:220,0,9	0/1:9,3:13:14.93:224,0,15	1/1:0,18:18:33.11:518,33,0	1/1:1,10:11:29.95:414,30,0	1/1:1,6:7:15.05:237,15,0	1/1:6,16:22:56.99:801,57,0	1/1:0,14:14:42.07:632,42,0	1/1:3,16:19:51.16:789,51,0	1/1:1,15:16:27.09:423,27,0	1/1:1,19:20:59.93:829,60,0	1/1:0,16:16:45.09:681,45,0	1/1:0,11:11:27.02:397,27,0	1/1:2,33:36:99:1524,99,0	1/1:0,13:13:39.06:588,39,0	1/1:0,12:12:36.12:571,36,0	1/1:0,3:3:9.03:143,9,0	1/1:1,14:14:42.12:634,42,0	1/1:1,13:14:36.12:568,36,0	1/1:3,8:11:17.99:255,18,0	1/1:2,18:20:51.11:776,51,0	1/1:0,16:16:42.14:658,42,0	1/1:1,5:6:11.63:158,12,0	1/1:0,10:10:24.08:380,24,0	1/1:3,24:27:81.19:1230,81,0	1/1:1,31:32:90.30:1379,90,0	1/1:0,6:6:18.06:286,18,0
chr10	96273005	.	AGAG	A	2089.80	PASS	AB=0.853;AC=16;AF=0.286;AN=56;BaseQRankSum=12.745;DP=671;FS=3.392;HRun=0;HaplotypeScore=157.5382;InbreedingCoeff=0.7901;MQ=43.05;MQ0=35;MQRankSum=-9.614;QD=15.14;ReadPosRankSum=-0.142;VQSLOD=3.4611;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:75.13:0,75,1435	1/1:5,7:11:24.06:292,24,0	0/0:51,0:8:11.52:0,12,147	0/0:66,0:9:8.69:0,9,158	1/1:7,9:16:27.27:314,27,0	0/0:18,0:17:39.13:0,39,804	0/0:28,0:27:45.03:0,45,771	0/0:22,0:17:32.92:0,33,492	0/0:15,0:14:39.10:0,39,716	0/0:23,0:20:57.17:0,57,1062	0/0:22,0:22:66.16:0,66,1249	0/0:20,0:17:22.41:0,22,820	0/0:19,0:19:31.61:0,32,893	0/0:28,0:26:66.20:0,66,1333	1/1:10,8:18:12.28:245,12,0	0/0:33,0:33:76.80:0,77,1591	0/0:45,0:45:84.45:0,84,2116	0/0:25,0:25:30.96:0,31,1175	1/1:10,3:11:29.90:283,30,0	1/1:7,4:11:20.97:217,21,0	0/1:17,1:16:53.55:54,0,54	0/0:20,0:20:54:0,54,880	0/0:14,0:14:14.52:0,15,671	0/0:27,0:27:63.14:0,63,1165	1/1:5,7:12:20.99:242,21,0	0/1:15,7:21:86.98:359,0,87	1/1:8,8:16:9.74:281,10,0	0/0:15,0:13:27.07:0,27,528
chr10	96273024	.	GAGA	G	2457.48	PASS	AB=0.779;AC=15;AF=0.268;AN=56;BaseQRankSum=12.320;DP=614;FS=7.573;HRun=0;HaplotypeScore=156.1595;InbreedingCoeff=0.6957;MQ=45.21;MQ0=37;MQRankSum=-10.309;QD=23.40;ReadPosRankSum=-0.732;VQSLOD=3.0915;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:68.92:0,69,1190	1/1:2,6:7:21.03:274,21,0	0/0:43,1:11:4.21:0,4,214	0/0:67,0:10:12.34:0,12,179	1/1:2,11:13:27.49:400,27,0	0/0:16,0:15:42.06:0,42,801	0/0:14,0:14:36.11:0,36,762	0/0:28,0:23:56.97:0,57,986	0/0:19,0:19:54.17:0,54,1081	0/0:23,0:21:63.22:0,63,1413	0/0:22,0:21:57.07:0,57,1110	0/0:20,0:18:45.15:0,45,960	0/0:18,0:18:53.92:0,54,1152	0/0:26,0:24:69.14:0,69,1400	1/1:1,10:11:29.96:354,30,0	0/0:32,0:32:93.17:0,93,1861	0/0:42,0:43:99:0,103,2405	0/0:28,1:29:24.42:0,24,1663	0/1:10,4:9:31.73:201,0,32	1/1:0,5:5:15.05:224,15,0	0/1:11,1:11:45.21:67,0,45	0/0:17,0:17:45.11:0,45,894	0/0:14,0:14:41.57:0,42,780	0/0:26,0:26:52.12:0,52,1214	1/1:3,8:11:23.95:280,24,0	0/1:7,10:17:99:392,0,113	1/1:3,10:13:32.97:457,33,0	0/0:16,0:14:24.04:0,24,452
chr10	96273071	.	A	AGAAGAG	4302.25	PASS	AB=0.997;AC=26;AF=0.464;AN=56;BaseQRankSum=4.881;DP=548;FS=5.549;HRun=0;HaplotypeScore=227.1127;InbreedingCoeff=-0.3478;MQ=37.99;MQ0=24;MQRankSum=-4.414;QD=10.37;ReadPosRankSum=2.222;VQSLOD=3.5689;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:40:79.56:832,80,0	0/1:9,0:9:41.89:42,0,162	0/0:21,0:2:2.68:0,3,11	0/0:25,0:7:17.33:0,17,202	0/1:23,0:20:52.66:53,0,155	0/1:17,0:16:33.90:243,0,34	0/1:10,0:8:25.97:26,0,61	1/1:17,0:12:29.83:322,30,0	0/1:19,0:17:29.89:378,0,30	0/1:23,0:21:99:222,0,172	0/1:11,0:9:20.91:31,0,21	0/0:15,0:13:11.95:0,12,94	0/1:16,0:14:81.21:164,0,81	0/1:20,0:20:99:234,0,138	0/1:21,0:18:46.99:47,0,159	1/1:27,0:27:65.73:632,66,0	0/0:30,0:29:76.64:0,77,1265	0/0:26,0:26:71.96:0,72,1258	0/1:13,0:10:18.28:18,0,171	0/1:15,0:12:32.62:63,0,33	0/0:16,0:11:10.15:0,10,95	0/1:14,0:14:37.84:209,0,38	0/1:13,0:12:23.89:179,0,24	0/1:19,0:19:65.10:200,0,65	0/1:24,0:21:99:220,0,127	0/1:31,0:26:56.21:56,0,382	0/1:22,0:20:24.38:24,0,385	1/1:1,8:8:3.01:107,3,0
chr10	96273088	.	A	AGAG	984.79	PASS	AB=0.826;AC=3;AF=0.056;AN=54;BaseQRankSum=-0.564;DP=582;FS=1.336;HRun=0;HaplotypeScore=244.9873;InbreedingCoeff=-0.0850;MQ=34.54;MQ0=26;MQRankSum=-2.732;QD=11.72;ReadPosRankSum=4.764;VQSLOD=3.2511;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,19:39:80.15:540,0,80	0/0:13,0:13:32.44:0,32,337	./.	0/0:11,0:3:6.02:0,6,105	0/0:26,0:21:39.85:0,40,389	0/0:13,0:11:14.17:0,14,139	0/0:11,0:9:3.01:0,3,43	0/0:25,0:16:43.76:0,44,452	0/0:19,0:16:38.86:0,39,296	0/0:19,0:17:32.25:0,32,369	0/0:12,0:10:18.67:0,19,182	0/0:13,0:11:3.01:0,3,47	0/0:17,0:15:42:0,42,427	0/0:16,0:15:38.08:0,38,337	0/0:30,0:27:54.52:0,55,604	0/1:21,5:27:99:530,0,191	0/0:32,0:31:78.22:0,78,1247	0/0:26,0:26:53.78:0,54,1177	0/0:17,0:13:38.31:0,38,406	0/0:21,0:17:43.92:0,44,392	0/1:17,0:11:7.57:8,0,122	0/0:15,0:15:16.72:0,17,132	0/0:12,0:11:5.92:0,6,90	0/0:18,0:15:5.30:0,5,209	0/0:31,0:28:35.05:0,35,577	0/0:42,0:37:88.04:0,88,888	0/0:37,0:32:65.61:0,66,948	0/0:11,0:9:2.26:0,2,15
chr10	96273092	.	G	GGAGGAGGAA	9350.55	PASS	AB=1.000;AC=38;AF=0.704;AN=54;BaseQRankSum=4.627;DP=619;FS=16.733;HRun=0;HaplotypeScore=282.8789;InbreedingCoeff=0.2073;MQ=34.36;MQ0=26;MQRankSum=-6.124;QD=17.68;ReadPosRankSum=-3.330;VQSLOD=2.0386;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:38:38.49:426,38,0	0/1:14,0:14:40.83:227,0,41	./.	0/0:8,0:3:6.01:0,6,83	0/1:25,0:20:99:233,0,103	1/1:13,0:11:30.04:592,30,0	1/1:10,0:8:3.01:76,3,0	1/1:42,0:25:43.98:352,44,0	1/1:19,0:16:42.10:793,42,0	1/1:20,0:18:44.99:676,45,0	1/1:14,0:12:29.53:225,30,0	0/0:2,11:14:2.50:0,2,9	1/1:18,0:16:41.85:507,42,0	1/1:16,0:15:41.91:614,42,0	0/1:30,0:27:41.48:389,0,41	1/1:29,0:29:41.37:524,41,0	0/0:31,0:30:58.72:0,59,1295	0/0:27,0:27:67.58:0,68,1526	0/1:26,0:21:96.50:204,0,96	1/1:24,0:20:28.49:334,28,0	0/1:18,0:12:11.01:11,0,50	1/1:15,0:15:32.96:488,33,0	1/1:13,0:12:26.94:439,27,0	1/1:19,0:16:23.26:441,23,0	0/1:36,0:33:20.63:675,0,21	0/1:42,0:37:66.81:674,0,67	0/1:37,0:32:99:302,0,186	1/1:10,0:8:11.90:147,12,0
chr10	96273110	.	AGAG	A	1338.31	PASS	AB=0.992;AC=23;AF=0.411;AN=56;BaseQRankSum=4.756;DP=746;FS=13.076;HRun=0;HaplotypeScore=268.6976;InbreedingCoeff=0.3268;MQ=35.67;MQ0=28;MQRankSum=-5.836;QD=3.62;ReadPosRankSum=-4.235;VQSLOD=0.3228;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:38:47.03:47,0,370	0/0:20,0:20:41.43:0,41,536	0/0:21,0:2:2.93:0,3,18	0/0:29,0:5:11.42:0,11,75	0/0:32,0:27:17.46:0,17,435	1/1:17,0:15:19.82:130,20,0	1/1:14,0:12:11.80:91,12,0	0/1:52,0:34:12.82:13,0,302	1/1:17,0:15:0.02:83,0,0	0/1:24,0:22:48.95:215,0,49	1/1:16,0:14:13.47:88,13,0	1/1:18,0:16:15.33:106,15,0	1/1:17,1:17:2.26:127,2,0	0/1:19,0:18:39.87:122,0,40	0/0:38,0:35:24.49:0,24,604	0/0:31,0:31:15.69:0,16,650	0/0:30,1:29:49.25:0,49,1109	0/0:26,0:26:69.86:0,70,1066	0/1:34,0:28:28.58:29,0,287	0/0:32,0:28:35.51:0,36,532	0/0:16,0:16:32.89:0,33,280	1/1:16,0:16:6.10:82,6,0	0/1:14,0:13:5.80:116,0,6	1/1:19,0:18:1.61:100,2,0	0/0:47,0:45:5.75:0,6,754	0/1:49,3:46:99:172,0,635	0/0:38,0:33:59.94:0,60,752	0/0:14,0:12:26.78:0,27,308
chr10	96273128	.	AGAG	A	1954.06	PASS	AB=0.981;AC=24;AF=0.429;AN=56;BaseQRankSum=8.834;DP=889;FS=3.065;HRun=0;HaplotypeScore=263.9331;InbreedingCoeff=0.1618;MQ=38.63;MQ0=40;MQRankSum=-5.435;QD=4.05;ReadPosRankSum=-0.005;VQSLOD=2.1284;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:93.17:0,93,1615	0/0:24,1:25:30.05:0,30,1206	0/0:73,0:7:18.02:0,18,262	0/0:76,0:11:33.01:0,33,466	0/1:30,1:28:83.27:83,0,776	1/1:14,0:12:14.16:93,14,0	1/1:14,1:13:8.04:106,8,0	0/0:52,0:34:71.22:0,71,1358	0/1:16,0:15:6.22:79,0,6	0/1:32,0:29:40.75:282,0,41	1/1:19,0:17:19.56:136,20,0	1/1:20,0:19:17.66:127,18,0	0/1:18,0:17:5.10:99,0,5	0/1:23,0:22:19.21:206,0,19	0/1:38,0:36:35.07:35,0,926	0/0:33,0:33:88.92:0,89,1900	0/0:29,0:28:74.96:0,75,1526	0/0:27,0:27:75.08:0,75,1457	0/0:32,2:29:67.84:0,68,1149	0/1:35,3:33:99:137,0,786	0/1:21,0:21:2.84:3,0,697	1/1:21,0:21:19.21:156,19,0	0/1:13,0:13:47.92:94,0,48	1/1:18,0:17:14.56:158,15,0	0/1:45,4:48:99:275,0,1223	0/1:54,0:48:39.14:39,0,1650	0/1:40,2:37:34.95:35,0,1043	0/0:15,0:14:38.87:0,39,735
chr10	96273131	.	G	GGAA	4541.65	PASS	AB=0.880;AC=30;AF=0.536;AN=56;BaseQRankSum=9.553;DP=900;FS=14.988;HRun=0;HaplotypeScore=254.6629;InbreedingCoeff=0.1904;MQ=39.09;MQ0=40;MQRankSum=-6.584;QD=8.33;ReadPosRankSum=3.834;VQSLOD=2.6872;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:67.94:0,68,909	0/1:26,0:26:60.82:61,0,872	0/0:78,1:8:20.99:0,21,263	0/0:80,0:11:32.97:0,33,416	0/1:25,6:28:99:202,0,446	1/1:14,0:12:9.17:84,9,0	1/1:15,0:13:3.08:84,3,0	0/0:51,0:34:83.05:0,83,956	1/1:16,0:15:14.99:109,15,0	1/1:31,0:30:19.99:236,20,0	1/1:20,0:18:34.25:221,34,0	1/1:20,0:19:1.32:50,1,0	1/1:18,0:17:1.52:164,2,0	1/1:23,0:22:26.19:239,26,0	0/1:27,12:37:99:345,0,653	0/0:33,0:33:38.87:0,39,798	0/0:29,0:28:76.32:0,76,1145	0/0:26,0:26:66.65:0,67,1020	0/1:35,0:30:22.66:23,0,733	0/1:28,10:33:99:437,0,566	0/1:19,2:22:14.90:15,0,611	1/1:20,0:20:29.68:196,30,0	0/1:14,0:14:27.85:109,0,28	1/1:18,0:17:23.83:164,24,0	0/1:42,8:48:99:828,0,820	0/1:46,8:48:99:440,0,1047	0/1:30,11:37:99:535,0,645	0/0:15,0:14:14.63:0,15,547
chr10	96273922	.	A	AC	1858.36	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.729;DP=819;FS=1.181;HRun=2;HaplotypeScore=78.4579;InbreedingCoeff=0.9999;MQ=87.71;MQ0=0;MQRankSum=-0.795;QD=38.72;ReadPosRankSum=-1.086;VQSLOD=3.6436;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,1285	0/0:13,0:13:36.09:0,36,431	0/0:30,0:30:84.26:0,84,1033	0/0:26,0:26:67.25:0,67,752	0/0:34,0:34:99:0,99,1224	0/0:28,0:28:84.26:0,84,1041	0/0:35,0:35:99:0,102,1239	1/1:1,32:32:96.32:1375,96,0	0/0:30,0:30:90.28:0,90,1115	0/0:25,0:25:69.22:0,69,856	0/0:19,0:19:57.18:0,57,705	0/0:37,0:37:99:0,111,1347	0/0:30,0:30:87.25:0,87,1054	0/0:36,0:36:99:0,105,1299	0/0:37,0:37:99:0,111,1333	0/0:32,0:32:90.28:0,90,1116	0/0:36,0:36:99:0,99,1197	0/0:30,0:30:87.27:0,87,1076	0/0:17,0:17:48.14:0,48,583	0/0:32,0:32:87.27:0,87,1078	0/0:55,0:55:99:0,159,1958	0/0:32,0:32:87.23:0,87,1050	0/0:18,0:18:51.16:0,51,631	0/0:28,0:28:84.26:0,84,1041	0/0:17,0:17:51.13:0,51,605	0/0:30,0:30:84.26:0,84,1041	0/0:26,0:26:78.24:0,78,965	1/1:0,15:15:42.14:605,42,0
chr10	96274378	.	A	AT	10937.11	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=0.347;DP=447;FS=1.831;HRun=0;HaplotypeScore=63.5887;InbreedingCoeff=0.9453;MQ=69.09;MQ0=2;MQRankSum=0.238;QD=30.64;ReadPosRankSum=0.910;VQSLOD=4.5896;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:93.23:1164,93,0	1/1:0,7:7:15.03:193,15,0	0/0:24,0:12:17.62:0,18,158	0/0:14,0:6:10.45:0,10,77	1/1:1,17:18:42.10:541,42,0	1/1:0,9:10:24.07:294,24,0	1/1:0,13:13:21.06:271,21,0	1/1:1,23:25:47.74:708,48,0	1/1:0,10:10:27.09:349,27,0	1/1:1,12:13:36.02:407,36,0	1/1:0,17:17:45.03:553,45,0	1/1:0,11:11:30.10:387,30,0	1/1:0,6:6:12.04:155,12,0	1/1:0,13:13:27.09:348,27,0	1/1:0,19:19:36.05:444,36,0	1/1:0,9:8:12.04:155,12,0	0/0:33,0:33:79.72:0,80,1004	0/0:19,0:19:47.52:0,48,639	1/1:1,16:16:46.34:539,46,0	1/1:1,10:11:30.08:383,30,0	1/1:1,11:12:23.80:307,24,0	1/1:0,3:3:9.03:116,9,0	1/1:0,13:13:36.03:442,36,0	1/1:0,22:22:57.19:737,57,0	1/1:1,16:17:33.11:427,33,0	1/1:0,17:17:51.17:658,51,0	1/1:0,14:14:36.12:466,36,0	1/1:0,23:23:69.22:892,69,0
chr10	96274510	.	C	CA	2929.55	PASS	AB=0.780;AC=37;AF=0.661;AN=56;BaseQRankSum=-4.113;DP=483;FS=0.000;HRun=15;HaplotypeScore=63.6131;InbreedingCoeff=0.1372;MQ=53.95;MQ0=16;MQRankSum=2.615;QD=7.13;ReadPosRankSum=-0.819;VQSLOD=2.2553;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,20:32:14.12:247,14,0	0/1:8,3:9:0.26:89,0,0	0/1:13,0:5:5.21:11,0,5	0/0:8,0:5:8.83:0,9,54	0/1:10,15:27:8.80:283,0,9	1/1:11,10:20:5.84:253,6,0	0/1:14,3:16:14.59:15,0,24	0/1:19,3:23:27.44:27,0,145	1/1:4,1:8:11.81:85,12,0	1/1:15,8:22:15.12:182,15,0	0/1:11,7:19:8.71:138,0,9	1/1:10,9:18:20.98:236,21,0	1/1:4,7:11:7.97:80,8,0	0/1:11,6:15:21.26:48,0,21	1/1:7,7:14:11.99:101,12,0	1/1:4,8:11:2.35:88,2,0	0/0:31,0:40:73.99:0,74,393	0/0:16,0:17:31.28:0,31,182	1/1:6,7:12:20.20:148,20,0	0/1:12,5:17:21.98:91,0,22	0/1:8,4:13:0.62:53,0,1	0/1:8,3:11:14.34:96,0,14	0/1:9,6:15:49.02:49,0,51	1/1:7,5:14:17.67:128,18,0	1/1:8,8:13:20.94:170,21,0	1/1:9,15:22:44.70:356,45,0	1/1:5,7:12:15.45:127,15,0	0/0:7,0:7:8.69:0,9,54
chr10	96275348	.	GA	G	7863.91	PASS	AB=0.689;AC=44;AF=0.786;AN=56;BaseQRankSum=7.756;DP=564;FS=0.000;HRun=11;HaplotypeScore=56.5466;InbreedingCoeff=0.7539;MQ=75.34;MQ0=0;MQRankSum=-1.310;QD=17.02;ReadPosRankSum=3.675;VQSLOD=5.6557;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,17:22:47.93:394,48,0	1/1:0,14:14:38.95:320,39,0	0/1:12,3:14:50.74:51,0,104	0/0:13,1:12:11.45:0,11,92	1/1:4,19:23:24.94:411,25,0	1/1:5,18:23:44.93:369,45,0	1/1:3,15:18:32.94:271,33,0	0/0:31,1:33:41.34:0,41,623	1/1:2,14:16:41.94:345,42,0	1/1:0,17:17:50.90:411,51,0	1/1:10,19:30:23.94:392,24,0	1/1:3,19:22:21.95:387,22,0	1/1:3,15:17:35.95:296,36,0	0/1:2,9:12:5.98:152,0,6	1/1:4,21:26:58.96:474,59,0	1/1:6,14:22:43.01:332,43,0	0/0:22,1:23:32.96:0,33,545	0/0:16,1:17:11.92:0,12,328	1/1:5,9:15:2.04:201,2,0	1/1:3,16:20:43.95:351,44,0	1/1:4,13:17:38.95:320,39,0	1/1:4,18:22:24.93:411,25,0	1/1:5,15:21:40.96:326,41,0	1/1:1,9:10:26.96:222,27,0	1/1:5,15:20:41.94:345,42,0	1/1:8,25:33:42.90:559,43,0	1/1:4,21:26:64.95:523,65,0	0/0:15,0:15:39.10:0,39,416
chr10	96275858	.	CAAGATGGAATCTG	C	10657.02	PASS	AB=0.542;AC=21;AF=0.375;AN=56;BaseQRankSum=13.933;DP=577;FS=39.593;HRun=0;HaplotypeScore=227.8990;InbreedingCoeff=0.8891;MQ=85.13;MQ0=0;MQRankSum=-13.512;QD=86.64;ReadPosRankSum=3.221;VQSLOD=3.1864;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,7712	1/1:0,10:10:27.09:1078,27,0	0/0:27,0:27:78.26:0,78,3757	0/0:29,0:29:75.26:0,75,4030	1/1:1,16:18:27.09:1043,27,0	0/0:26,0:26:66.23:0,66,4140	0/0:31,0:31:87.30:0,87,5198	1/1:4,6:10:18.06:510,18,0	0/0:28,0:28:69.24:0,69,4242	0/0:28,0:28:78.26:0,78,4789	0/0:19,0:19:57.18:0,57,3222	0/0:20,0:20:57.20:0,57,3559	0/0:27,0:27:75.26:0,75,4698	0/0:19,0:19:54.19:0,54,3541	1/1:2,11:13:30.10:1198,30,0	0/0:27,0:27:78.27:0,78,5007	0/0:33,0:33:93.32:0,93,5871	0/0:22,0:22:60.21:0,60,3751	1/1:3,3:6:9.03:360,9,0	1/1:2,11:13:33.11:1291,33,0	1/1:1,3:4:9.03:277,9,0	0/0:21,0:21:63.21:0,63,3844	0/0:16,0:16:45.15:0,45,2865	0/0:37,0:37:90.31:0,90,5209	1/1:3,14:18:45.15:1797,45,0	0/1:2,11:13:99:1186,0,147	1/1:0,16:16:41.98:1676,42,0	1/1:0,2:2:6.02:240,6,0
chr10	96275953	.	TTTTTTTTCCCCG	T	4324.19	PASS	AB=0.971;AC=20;AF=0.357;AN=56;BaseQRankSum=9.494;DP=529;FS=20.199;HRun=0;HaplotypeScore=150.0749;InbreedingCoeff=-0.3178;MQ=52.42;MQ0=31;MQRankSum=-5.662;QD=14.46;ReadPosRankSum=3.554;VQSLOD=2.5918;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:32:3.57:0,4,1478	0/1:9,0:8:33.19:33,0,419	0/0:33,0:13:32.45:0,32,551	0/0:25,0:8:18.02:0,18,283	0/1:17,0:15:81.46:81,0,685	1/1:16,0:14:4.85:423,5,0	0/1:26,1:24:45.24:385,0,45	0/0:22,0:20:52.17:0,52,1286	0/1:26,1:27:99:548,0,156	0/1:15,0:15:76.79:341,0,77	0/1:14,2:15:12.63:393,0,13	0/1:17,0:16:99:201,0,126	0/1:18,0:18:46.68:342,0,47	0/1:13,0:13:68.12:147,0,68	0/0:7,0:6:15.04:0,15,349	0/0:16,0:14:30:0,30,580	0/0:30,0:26:58.75:0,59,2150	0/0:36,0:34:87.29:0,87,2858	0/1:22,0:18:99:104,0,1152	0/1:10,0:10:51.07:51,0,101	1/1:5,0:1:3.01:60,3,0	0/1:8,5:13:19.84:364,0,20	0/1:23,0:23:55.72:291,0,56	0/1:28,0:27:99:393,0,221	0/0:12,0:8:18.03:0,18,392	0/1:14,0:13:99:127,0,570	0/1:9,0:8:39.08:39,0,507	0/0:12,0:11:33.11:0,33,798
chr10	96275954	.	TTTTTTTCCCCG	T	5434.42	PASS	AB=0.897;AC=27;AF=0.482;AN=56;BaseQRankSum=8.561;DP=494;FS=14.536;HRun=0;HaplotypeScore=128.0621;InbreedingCoeff=0.2050;MQ=50.72;MQ0=31;MQRankSum=-4.226;QD=17.76;ReadPosRankSum=3.255;VQSLOD=2.6985;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:32:39.86:40,0,1144	0/1:9,0:8:33.84:34,0,324	0/0:30,0:11:29.20:0,29,466	0/0:24,0:7:17.97:0,18,268	0/1:17,0:15:81.98:82,0,528	1/1:5,10:14:20.89:563,21,0	1/1:10,15:22:10.19:517,10,0	0/0:21,0:18:45.14:0,45,1069	1/1:13,10:23:25.60:759,26,0	0/1:4,8:12:3.24:429,0,3	1/1:4,11:14:15.55:455,16,0	0/1:8,6:13:12.23:223,0,12	1/1:15,0:16:23.51:447,24,0	0/1:11,0:12:10.14:157,0,10	0/0:7,0:6:15.03:0,15,284	0/0:16,0:14:25.98:0,26,442	0/0:31,0:27:61.45:0,61,2044	0/0:35,0:33:87.28:0,87,2554	0/1:22,0:18:99:105,0,951	0/1:10,0:10:53.97:54,0,83	1/1:5,0:1:3.01:60,3,0	1/1:9,2:12:17.53:376,18,0	1/1:4,13:17:14.39:436,14,0	0/1:10,13:23:99:534,0,136	0/0:12,0:8:17.42:0,17,298	0/1:13,0:12:99:126,0,433	0/1:9,0:8:39.08:39,0,417	0/0:12,0:11:33.11:0,33,694
chr10	96275955	.	TTTTTTCCCCG	T	5023.41	PASS	AB=0.988;AC=30;AF=0.536;AN=56;BaseQRankSum=9.936;DP=462;FS=26.568;HRun=0;HaplotypeScore=113.8528;InbreedingCoeff=0.2559;MQ=50.76;MQ0=31;MQRankSum=-3.481;QD=17.38;ReadPosRankSum=4.545;VQSLOD=1.5886;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:32:99:115,0,850	0/1:9,0:8:35.64:36,0,232	0/0:29,0:11:22.59:0,23,386	0/0:23,0:7:13.15:0,13,238	0/1:15,0:13:85.48:85,0,388	1/1:15,0:13:21.07:472,21,0	1/1:21,1:19:10.90:482,11,0	0/0:22,0:19:49.22:0,49,933	1/1:13,1:15:27.09:647,27,0	1/1:11,0:11:17.89:391,18,0	1/1:15,0:14:19.09:414,19,0	1/1:9,0:8:8.84:212,9,0	1/1:12,0:12:21.07:407,21,0	0/1:8,0:8:7.40:151,0,7	0/0:7,0:6:15:0,15,233	0/1:17,0:15:6.68:7,0,288	0/0:33,0:29:67.11:0,67,2009	0/0:35,0:33:87.24:0,87,2300	0/1:22,0:18:99:116,0,734	0/1:10,0:10:65.14:70,0,65	1/1:5,0:1:3.01:60,3,0	1/1:10,0:10:17.93:347,18,0	1/1:14,1:15:14.85:390,15,0	0/1:18,2:21:79.33:450,0,79	0/0:12,0:8:16.85:0,17,235	0/1:13,0:12:99:132,0,310	0/1:9,0:8:39.10:39,0,339	0/0:12,0:11:33.08:0,33,621
chr10	96275959	.	TTCCCCG	T	4743.31	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=9.133;DP=430;FS=45.154;HRun=0;HaplotypeScore=85.6340;InbreedingCoeff=0.2692;MQ=49.99;MQ0=30;MQRankSum=-3.856;QD=16.59;ReadPosRankSum=7.250;VQSLOD=2.0649;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:33:99:374,0,136	0/1:10,0:9:30.43:47,0,30	0/0:20,0:7:16.56:0,17,167	0/0:13,0:6:10.79:0,11,169	0/1:14,0:12:39.30:102,0,39	1/1:14,1:13:21.07:379,21,0	1/1:22,0:19:11.57:377,12,0	0/0:18,0:16:35.13:0,35,498	1/1:15,0:15:27.09:489,27,0	1/1:10,0:10:18.06:348,18,0	1/1:14,0:13:17.60:286,18,0	1/1:8,0:7:9.03:164,9,0	1/1:12,0:12:21.07:405,21,0	1/1:4,5:9:8.53:140,9,0	0/0:7,0:6:8.45:0,8,40	0/1:18,0:16:49.50:177,0,50	0/0:31,0:27:57.05:0,57,1363	0/0:30,0:29:67.93:0,68,1593	0/1:21,0:17:99:187,0,129	0/1:10,0:10:8.34:110,0,8	1/1:7,0:3:3.01:60,3,0	1/1:10,0:10:18.02:300,18,0	1/1:14,0:14:15.05:261,15,0	0/1:18,0:18:56.90:334,0,57	0/0:11,0:7:3.43:0,3,8	0/1:12,0:11:25.27:159,0,25	0/1:10,0:9:43.76:44,0,57	0/0:9,0:9:27.08:0,27,378
chr10	96275960	.	TCCCCG	T	4812.30	PASS	AB=0.947;AC=39;AF=0.750;AN=52;BaseQRankSum=5.686;DP=328;FS=19.166;HRun=0;HaplotypeScore=68.5598;InbreedingCoeff=0.7084;MQ=53.37;MQ0=29;MQRankSum=-5.768;QD=22.81;ReadPosRankSum=6.248;VQSLOD=2.7502;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,12:18:24.08:507,24,0	1/1:0,3:3:3.01:60,3,0	0/0:16,0:6:14.05:0,14,154	0/0:11,0:6:12.91:0,13,137	1/1:2,2:2:6.02:120,6,0	1/1:14,1:13:21.07:350,21,0	1/1:19,2:19:11.57:350,12,0	0/0:17,0:14:33.05:0,33,471	1/1:13,2:15:27.09:438,27,0	1/1:8,2:10:18.06:320,18,0	1/1:14,0:13:18.02:247,18,0	1/1:7,1:7:9.03:151,9,0	1/1:2,10:12:21.07:398,21,0	1/1:7,0:8:9.03:134,9,0	./.	1/1:1,9:10:12.04:251,12,0	0/0:28,0:24:51.17:0,51,1313	0/0:29,0:27:68.33:0,68,1615	1/1:3,4:4:12.04:249,12,0	1/1:0,4:5:6.02:120,6,0	1/1:3,3:3:3.01:60,3,0	1/1:8,2:10:18.02:286,18,0	1/1:14,0:14:15.05:228,15,0	0/1:17,1:18:56.96:301,0,57	./.	1/1:1,3:4:9.03:180,9,0	1/1:1,3:3:3.01:60,3,0	0/0:10,0:9:27.08:0,27,378
chr10	96279192	.	GT	G	442.92	PASS	AB=0.896;AC=7;AF=0.130;AN=54;BaseQRankSum=6.735;DP=597;FS=5.636;HRun=8;HaplotypeScore=72.0246;InbreedingCoeff=0.8256;MQ=50.16;MQ0=12;MQRankSum=-3.662;QD=5.54;ReadPosRankSum=1.434;VQSLOD=0.3417;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,11:14:27.04:260,27,0	0/0:12,0:12:30.09:0,30,362	0/0:13,0:11:23.56:0,24,222	0/0:16,0:9:10.06:0,10,88	0/0:35,2:36:11.32:0,11,687	0/0:26,0:25:69.17:0,69,817	0/0:9,0:9:24.07:0,24,288	0/0:34,0:32:78.18:0,78,896	0/0:21,0:21:48.01:0,48,543	0/0:30,0:30:72.21:0,72,858	0/0:28,2:30:46.29:0,46,839	0/0:21,0:19:54.16:0,54,649	0/0:19,0:19:50.98:0,51,549	0/0:20,0:18:47.93:0,48,518	0/0:20,0:19:50.95:0,51,571	1/1:6,4:10:12.01:116,12,0	1/1:4,9:13:21.03:203,21,0	./.	0/0:20,1:21:10.14:0,10,406	0/0:29,2:31:55.32:0,55,946	0/0:20,1:21:31.20:0,31,622	0/0:17,0:17:42.09:0,42,488	0/0:22,0:22:48.15:0,48,576	0/0:14,0:14:33.10:0,33,399	0/0:14,0:14:30.09:0,30,362	0/1:38,5:43:4.19:4,0,954	0/0:37,2:38:44.97:0,45,1097	0/0:26,0:26:63.18:0,63,748
chr10	96279462	.	CAG	C	38.74	PASS	AB=0.915;AC=5;AF=0.119;AN=42;BaseQRankSum=0.261;DP=343;FS=1.413;HRun=0;HaplotypeScore=62.7977;InbreedingCoeff=0.0443;MQ=57.63;MQ0=115;MQRankSum=0.403;QD=0.59;ReadPosRankSum=0.518;VQSLOD=1.1593;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:2:3.01:0,3,39	0/0:9,1:10:27.09:0,27,426	0/1:28,0:11:25.20:25,0,166	0/0:26,0:10:7.27:0,7,173	0/0:20,0:19:42.14:0,42,775	0/0:12,0:3:9.03:0,9,151	0/0:6,0:3:3.01:0,3,58	./.	./.	0/1:12,4:14:52.69:53,0,570	0/0:25,2:27:33:0,33,991	./.	0/0:9,0:2:3.01:0,3,58	./.	0/0:11,0:3:3.01:0,3,58	0/0:7,2:4:3.01:0,3,58	1/1:3,1:1:3.01:46,3,0	./.	./.	0/0:13,0:12:17.42:0,17,270	./.	0/0:11,0:11:27.09:0,27,504	0/0:10,0:9:18.06:0,18,345	0/0:4,0:3:9.03:0,9,165	0/0:12,0:11:24.08:0,24,449	0/1:16,1:10:18.80:19,0,365	0/0:20,3:18:42.14:0,42,764	0/0:12,0:12:24.08:0,24,431
chr10	96279481	.	AAAAAAAAC	A	1978.35	PASS	AB=0.819;AC=22;AF=0.458;AN=48;BaseQRankSum=-3.284;DP=304;FS=0.705;HRun=0;HaplotypeScore=74.3259;InbreedingCoeff=0.3074;MQ=63.43;MQ0=44;MQRankSum=-2.646;QD=15.95;ReadPosRankSum=2.984;VQSLOD=1.9756;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:3:3.01:0,3,91	0/0:11,0:10:26.76:0,27,200	0/0:45,0:15:13.33:0,13,410	0/0:29,0:12:20.01:0,20,190	0/1:19,0:18:32.56:33,0,83	1/1:4,3:5:3.63:139,4,0	./.	./.	1/1:2,0:1:2.97:20,3,0	0/1:7,7:12:99:465,0,244	0/1:8,14:22:28.22:526,0,28	1/1:1,3:4:2.86:69,3,0	1/1:1,0:1:2.97:20,3,0	1/1:4,0:1:2.97:20,3,0	1/1:6,0:4:2.92:17,3,0	0/0:6,0:5:9.01:0,9,162	0/0:2,0:1:3.01:0,3,99	0/0:8,0:2:0.47:0,0,1	./.	0/0:22,0:21:21.81:0,22,195	./.	1/1:5,6:10:23.22:500,23,0	1/1:7,6:12:1.44:235,1,0	1/1:2,1:3:2.94:71,3,0	0/0:11,0:11:4.31:0,4,114	0/0:10,0:7:11.88:0,12,93	0/1:18,0:13:15.44:15,0,119	0/0:15,0:15:23.58:0,24,362
chr10	96279483	.	AAAAAAC	A	1964.12	PASS	AB=0.992;AC=33;AF=0.688;AN=48;BaseQRankSum=-1.369;DP=300;FS=2.683;HRun=0;HaplotypeScore=68.1966;InbreedingCoeff=0.1547;MQ=63.89;MQ0=39;MQRankSum=-3.277;QD=8.58;ReadPosRankSum=2.697;VQSLOD=1.7057;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:3:3.01:0,3,60	0/1:11,0:10:0.66:32,0,1	0/0:44,0:15:21.34:0,21,266	0/1:30,0:12:1.94:2,0,111	1/1:17,2:18:31.70:265,32,0	1/1:7,0:5:8.98:128,9,0	./.	./.	1/1:2,0:1:2.97:20,3,0	0/1:14,0:12:99:282,0,133	1/1:21,0:21:7.43:329,7,0	1/1:4,0:4:2.73:42,3,0	1/1:1,0:1:2.97:20,3,0	1/1:4,0:1:2.97:20,3,0	1/1:3,3:4:3.01:58,3,0	0/1:7,0:6:8.88:9,0,107	0/0:2,0:1:3.01:0,3,70	0/0:8,0:2:0:0,0,0	./.	0/1:22,0:21:39.55:40,0,76	./.	1/1:13,0:12:27:350,27,0	1/1:13,0:12:17.95:197,18,0	1/1:3,0:3:3.01:45,3,0	1/1:11,0:11:21.76:124,22,0	1/1:8,0:7:7.56:35,8,0	0/1:17,1:13:16.63:103,0,17	0/1:15,0:15:1.91:2,0,169
chr10	96279484	.	AAAAAC	A	2310.75	PASS	AB=0.989;AC=34;AF=0.708;AN=48;BaseQRankSum=-2.198;DP=298;FS=0.000;HRun=0;HaplotypeScore=63.5943;InbreedingCoeff=0.2930;MQ=64.11;MQ0=37;MQRankSum=-3.769;QD=11.73;ReadPosRankSum=2.286;VQSLOD=2.0923;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:3:3.01:0,3,40	1/1:11,0:10:20.21:157,20,0	0/0:44,0:15:18.54:0,19,248	0/0:30,0:12:11.46:0,11,110	1/1:18,1:18:40.55:406,41,0	1/1:7,0:5:9.46:99,9,0	./.	./.	1/1:2,0:1:2.97:20,3,0	0/1:15,0:13:99:258,0,105	1/1:21,0:21:5.13:290,5,0	1/1:4,0:4:2.81:36,3,0	1/1:1,0:1:2.97:20,3,0	1/1:3,0:1:2.97:20,3,0	1/1:6,0:4:3.01:40,3,0	0/1:7,0:6:9.08:9,0,74	0/0:2,0:1:3.01:0,3,56	0/0:8,0:2:0:0,0,0	./.	0/1:21,1:21:49.98:107,0,50	./.	1/1:12,0:11:29.90:326,30,0	1/1:13,0:12:17.91:174,18,0	1/1:3,0:3:3.01:39,3,0	1/1:10,1:11:24.35:205,24,0	1/1:8,0:7:11.43:73,11,0	1/1:16,1:13:11.01:170,11,0	0/1:15,0:15:6.77:7,0,117
chr10	96279485	.	AAAAC	A	2606.05	PASS	AB=0.989;AC=34;AF=0.708;AN=48;BaseQRankSum=-3.585;DP=293;FS=0.830;HRun=0;HaplotypeScore=58.9458;InbreedingCoeff=0.2475;MQ=64.66;MQ0=34;MQRankSum=-5.446;QD=13.36;ReadPosRankSum=1.242;VQSLOD=2.3360;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:3:3.01:0,3,40	1/1:6,5:10:24.87:320,25,0	0/0:42,0:13:8.07:0,8,205	0/0:29,0:12:5.35:0,5,92	1/1:17,2:18:43.59:396,44,0	1/1:6,0:5:9.74:83,10,0	./.	./.	1/1:2,0:1:2.97:20,3,0	0/1:15,0:13:68.22:231,0,68	1/1:21,0:21:18.70:258,19,0	1/1:4,0:4:2.90:31,3,0	1/1:1,0:1:2.97:20,3,0	1/1:2,0:1:2.97:20,3,0	1/1:5,0:4:3.01:34,3,0	0/1:7,0:6:15.52:16,0,34	0/0:2,0:1:3.01:0,3,42	0/0:8,0:2:0:0,0,0	./.	0/1:21,1:21:15.84:122,0,16	./.	1/1:12,0:11:29.89:287,30,0	1/1:12,0:11:17.76:152,18,0	1/1:3,0:3:3.01:33,3,0	1/1:7,4:11:26.65:289,27,0	1/1:6,2:7:9.87:114,10,0	1/1:17,2:15:32.66:284,33,0	0/1:15,0:15:38.18:38,0,71
chr10	96279487	.	AAC	A	2256.98	PASS	AB=0.988;AC=39;AF=0.813;AN=48;BaseQRankSum=-3.082;DP=278;FS=0.000;HRun=0;HaplotypeScore=53.2856;InbreedingCoeff=0.2921;MQ=62.68;MQ0=27;MQRankSum=-5.312;QD=8.89;ReadPosRankSum=0.962;VQSLOD=2.8480;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:3:2.74:0,3,12	1/1:11,0:10:26.97:241,27,0	0/1:38,0:12:13.04:13,0,125	0/1:25,1:11:2.79:3,0,65	1/1:20,0:18:48.39:327,48,0	1/1:6,0:5:8.46:51,8,0	./.	./.	1/1:2,0:2:5.94:41,6,0	1/1:15,0:13:14.65:176,15,0	1/1:18,0:19:29.39:199,29,0	1/1:4,0:4:2.98:21,3,0	1/1:1,0:1:2.97:20,3,0	1/1:3,0:2:5.94:41,6,0	1/1:5,0:4:2.99:23,3,0	0/1:7,0:6:1.09:47,0,1	0/0:2,0:1:2.84:0,3,14	0/0:8,0:2:0:0,0,0	./.	1/1:8,14:21:14.21:203,14,0	./.	1/1:10,0:10:29.73:212,30,0	1/1:11,0:10:17.85:127,18,0	1/1:3,0:3:2.98:22,3,0	1/1:11,0:11:29.22:214,29,0	1/1:7,0:6:11.93:89,12,0	1/1:18,0:15:32.69:224,33,0	1/1:14,0:14:7.68:78,8,0
chr10	96279488	.	AC	A	2026.62	PASS	AB=1.000;AC=42;AF=0.875;AN=48;BaseQRankSum=-3.677;DP=273;FS=3.995;HRun=1;HaplotypeScore=49.7284;InbreedingCoeff=0.2967;MQ=59.40;MQ0=26;MQRankSum=-5.257;QD=9.13;ReadPosRankSum=1.507;VQSLOD=1.2856;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:3:0.47:1,0,0	1/1:8,3:10:26.73:187,27,0	0/0:35,0:12:3.93:0,4,120	0/1:23,0:9:5.57:6,0,26	1/1:17,3:18:48.19:296,48,0	0/1:6,0:5:2.71:24,0,3	1/1:3,0:3:2.97:20,3,0	./.	1/1:2,0:2:5.94:41,6,0	1/1:15,0:13:35.62:186,36,0	1/1:18,1:19:28.05:164,28,0	1/1:4,0:4:2.88:15,3,0	1/1:1,0:1:2.97:20,3,0	1/1:3,0:2:5.94:41,6,0	1/1:5,0:4:2.92:17,3,0	1/1:7,0:6:8.87:59,9,0	0/0:2,0:1:0.47:0,0,1	./.	./.	1/1:20,2:21:14.03:151,14,0	./.	1/1:10,1:10:29.17:165,29,0	1/1:10,1:10:17.58:106,18,0	1/1:3,0:3:2.90:16,3,0	1/1:10,1:11:29.60:193,30,0	1/1:7,0:6:11.82:77,12,0	1/1:17,0:14:33.66:200,34,0	1/1:14,0:14:22.34:146,22,0
chr10	96279492	.	AAAC	A	34.54	PASS	AB=0.979;AC=15;AF=0.300;AN=50;BaseQRankSum=5.314;DP=272;FS=9.638;HRun=0;HaplotypeScore=60.9964;InbreedingCoeff=-0.0089;MQ=59.28;MQ0=38;MQRankSum=-2.785;QD=0.26;ReadPosRankSum=5.436;VQSLOD=-0.3288;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:3:3.01:0,3,55	0/1:10,2:11:20.50:21,0,79	0/0:31,0:11:13.73:0,14,225	0/0:24,0:10:20.94:0,21,167	0/1:18,1:17:7.63:8,0,106	0/1:7,0:5:2:2,0,5	0/0:3,0:3:2.90:0,3,16	./.	0/0:2,0:2:5.40:0,5,25	0/0:17,0:14:11.65:0,12,257	0/1:18,0:18:10.20:10,0,28	1/1:5,0:4:2.49:9,2,0	0/0:1,0:1:2.80:0,3,13	0/0:3,0:2:5.78:0,6,31	1/1:4,0:3:2.74:12,3,0	0/1:9,0:8:2.27:2,0,105	0/0:4,0:1:3.01:0,3,64	0/0:8,0:2:0:0,0,0	./.	0/1:20,0:19:29.50:30,0,80	./.	0/1:10,0:9:2.20:37,0,2	0/0:11,0:10:0.07:0,0,36	1/1:1,0:1:0.89:2,1,0	0/0:10,1:11:25.14:0,25,156	0/0:8,0:7:11.49:0,11,89	0/1:16,0:13:17.96:18,0,36	0/1:11,0:11:5.12:5,0,61
chr10	96279798	.	CAAAAAA	C	2622.04	PASS	AB=0.643;AC=21;AF=0.375;AN=56;BaseQRankSum=1.179;DP=405;FS=12.515;HRun=18;HaplotypeScore=76.3168;InbreedingCoeff=0.8202;MQ=61.73;MQ0=7;MQRankSum=-9.276;QD=24.51;ReadPosRankSum=4.390;VQSLOD=-0.5476;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:20:15.05:0,15,403	0/0:3,0:9:15:0,15,340	0/0:28,0:12:14.65:0,15,193	0/0:19,0:7:12.35:0,12,69	0/0:29,0:28:51.13:0,51,1045	1/1:1,9:9:15.04:254,15,0	1/1:4,0:4:2.50:95,2,0	0/0:16,0:19:39.07:0,39,877	1/1:1,4:5:8.91:152,9,0	1/1:6,13:20:41.88:692,42,0	1/1:4,8:13:23.69:382,24,0	0/1:4,4:9:9.26:172,0,9	1/1:2,2:4:5.96:102,6,0	1/1:2,7:9:17.62:265,18,0	0/0:8,0:8:21.05:0,21,480	0/0:1,0:8:6.02:0,6,127	0/0:8,0:14:18.06:0,18,392	0/0:12,0:15:39.12:0,39,1004	0/0:11,0:18:42.13:0,42,971	0/0:12,0:12:24.08:0,24,619	0/0:5,0:12:15.05:0,15,323	1/1:1,8:10:14.75:218,15,0	1/1:2,9:11:24:394,24,0	1/1:6,6:12:5.64:101,6,0	0/0:7,0:24:21.07:0,21,475	0/0:12,0:19:30.10:0,30,714	0/0:8,0:22:12.48:0,12,188	0/0:12,0:16:39.09:0,39,953
chr10	96280682	.	GTTGCCTCCC	G	8317	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.046;DP=546;FS=32.505;HRun=0;HaplotypeScore=209.2296;InbreedingCoeff=0.9968;MQ=83.15;MQ0=0;MQRankSum=-15.220;QD=73.60;ReadPosRankSum=3.831;VQSLOD=3.1150;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,160,7367	0/0:11,0:11:33.11:0,33,1667	0/0:17,0:17:45.01:0,45,1855	0/0:26,0:26:78.05:0,78,2810	0/0:16,0:16:48.16:0,48,2284	1/1:0,14:14:42.14:1103,42,0	1/1:2,9:11:33.06:769,33,0	0/0:30,0:30:90.29:0,90,4199	1/1:0,11:11:33.11:877,33,0	1/1:1,10:11:33.11:834,33,0	1/1:0,12:12:36.09:878,36,0	1/1:0,6:6:18.06:462,18,0	1/1:0,11:11:33.11:860,33,0	1/1:1,8:9:24.08:630,24,0	0/0:27,0:27:81.28:0,81,4021	0/0:28,0:28:84.29:0,84,4251	0/0:49,0:49:99:0,144,7040	0/0:20,0:20:60.21:0,60,2882	0/0:18,0:18:51.18:0,51,2208	0/0:17,0:17:48.42:0,48,2292	0/0:50,0:50:99:0,147,7011	1/1:0,10:10:30.10:794,30,0	1/1:0,7:7:18.06:467,18,0	1/1:2,9:11:27.07:643,27,0	0/0:19,0:19:57.20:0,57,2789	0/0:17,0:17:51.18:0,51,2486	0/0:25,0:25:75.26:0,75,3666	0/0:9,0:9:27.07:0,27,1236
chr10	96280692	.	AT	A	1569.33	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.810;DP=539;FS=28.410;HRun=1;HaplotypeScore=139.9528;InbreedingCoeff=0.9954;MQ=85.78;MQ0=0;MQRankSum=-15.581;QD=14.67;ReadPosRankSum=4.506;VQSLOD=1.8871;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,2191	0/0:12,0:12:36.12:0,36,576	0/0:17,0:17:47.99:0,48,695	0/0:24,0:24:62.62:0,63,851	0/0:16,0:16:48.15:0,48,740	1/1:0,14:14:41.34:264,41,0	1/1:0,9:9:26.28:154,26,0	0/0:28,0:28:84.24:0,84,1293	1/1:0,11:11:32.37:200,32,0	1/1:0,10:10:29.10:186,29,0	1/1:0,12:12:31.74:182,32,0	1/1:0,6:6:16.95:100,17,0	1/1:0,11:11:32.22:195,32,0	1/1:0,8:8:23.58:148,24,0	0/0:30,0:30:90.29:0,90,1398	0/0:32,0:32:96.33:0,96,1532	0/0:48,0:48:99:0,144,2240	0/0:22,0:22:66.17:0,66,1002	0/0:19,0:19:54.17:0,54,827	0/0:17,0:17:48.15:0,48,744	0/0:46,0:46:99:0,135,2107	1/1:0,10:10:28.72:160,29,0	1/1:0,7:7:17.11:96,17,0	1/1:0,9:9:21.12:112,21,0	0/0:21,0:21:63.18:0,63,954	0/0:17,0:17:51.17:0,51,816	0/0:27,0:27:81.28:0,81,1291	0/0:8,0:8:24.08:0,24,384
chr10	96280695	.	CTCCG	C	5992.42	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.051;DP=540;FS=29.312;HRun=0;HaplotypeScore=159.7517;InbreedingCoeff=0.9973;MQ=85.14;MQ0=0;MQRankSum=-15.586;QD=54.98;ReadPosRankSum=4.194;VQSLOD=3.8409;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,4060	0/0:12,0:12:36.11:0,36,979	0/0:17,0:17:51.17:0,51,1337	0/0:23,0:22:65.03:0,65,1609	0/0:17,0:17:51.18:0,51,1469	1/1:0,14:14:42.14:827,42,0	1/1:0,9:9:27.09:507,27,0	0/0:25,0:25:75.26:0,75,2090	1/1:0,11:11:33.11:633,33,0	1/1:0,10:10:30.10:579,30,0	1/1:0,12:12:34.36:612,34,0	1/1:1,6:7:21.05:368,21,0	1/1:1,10:11:33.11:636,33,0	1/1:1,8:9:27.07:493,27,0	0/0:30,0:30:87.30:0,87,2498	0/0:33,0:33:99:0,99,2864	0/0:45,0:45:99:0,135,3771	0/0:23,0:23:69.24:0,69,1973	0/0:19,0:19:54.19:0,54,1504	0/0:15,0:15:45.15:0,45,1298	0/0:47,0:47:99:0,138,3972	1/1:0,10:10:30.10:551,30,0	1/1:0,7:7:18.06:314,18,0	1/1:0,9:9:27.09:472,27,0	0/0:23,0:23:69.22:0,69,1886	0/0:17,0:17:51.18:0,51,1478	0/0:28,0:28:84.29:0,84,2415	0/0:8,0:8:24.08:0,24,695
chr10	96281260	.	T	TTTTTG	20835.37	PASS	AB=0.944;AC=31;AF=0.554;AN=56;BaseQRankSum=-12.847;DP=689;FS=9.428;HRun=0;HaplotypeScore=114.6672;InbreedingCoeff=0.9260;MQ=74.30;MQ0=2;MQRankSum=-3.618;QD=50.45;ReadPosRankSum=1.594;VQSLOD=5.1655;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,34:46:99:2838,99,0	0/0:10,0:10:27.09:0,27,514	0/0:26,0:25:29.65:0,30,404	0/0:31,0:25:31.09:0,31,501	0/0:24,0:24:54.81:0,55,1035	1/1:7,13:21:42.14:1195,42,0	1/1:8,17:26:33.11:943,33,0	0/0:34,0:34:63.13:0,63,982	1/1:3,12:16:33.11:957,33,0	1/1:12,25:37:77.25:2217,77,0	1/1:0,10:11:27.09:777,27,0	1/1:6,14:20:45.15:1293,45,0	1/1:6,17:23:42.14:1202,42,0	1/1:7,13:20:36.12:1044,36,0	0/0:23,0:23:57.16:0,57,1020	1/1:9,17:26:51.17:1479,51,0	1/1:4,26:31:57.19:1656,57,0	1/1:6,16:22:42.10:1140,42,0	0/0:18,0:18:30.09:0,30,528	0/0:25,0:25:54.14:0,54,952	0/0:27,0:27:72.25:0,72,1325	1/1:7,19:27:48.07:1207,48,0	1/1:5,17:23:43.18:1160,43,0	1/1:7,21:28:57.20:1643,57,0	0/0:28,0:28:72.08:0,72,1328	0/1:32,2:34:84.13:84,0,1416	0/0:20,0:18:39.11:0,39,709	0/0:10,0:10:18.01:0,18,243
chr10	96282217	.	CG	C	8551.84	PASS	AB=1.000;AC=43;AF=0.796;AN=54;BaseQRankSum=-1.425;DP=415;FS=4.144;HRun=5;HaplotypeScore=66.2753;InbreedingCoeff=0.7927;MQ=62.72;MQ0=1;MQRankSum=0.263;QD=24.72;ReadPosRankSum=5.658;VQSLOD=3.8482;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,5:5:15.04:170,15,0	0/0:11,0:8:21.07:0,21,280	0/0:9,0:8:20.74:0,21,254	1/1:4,12:16:33.09:373,33,0	1/1:0,16:16:30.09:339,30,0	1/1:0,19:19:42.12:475,42,0	0/0:18,0:18:49:0,49,604	1/1:3,15:18:45.10:489,45,0	1/1:1,21:22:56.83:587,57,0	1/1:3,16:19:39.11:442,39,0	1/1:3,19:22:54.15:611,54,0	1/1:1,14:15:30.05:338,30,0	1/1:3,18:20:39.11:439,39,0	1/1:4,13:17:30.09:340,30,0	0/1:6,0:6:7.61:76,0,8	1/1:6,1:7:0.69:13,1,0	0/0:4,5:9:0.43:0,0,2	1/1:2,9:10:24.07:272,24,0	1/1:1,10:10:24.07:271,24,0	1/1:1,24:25:60.17:680,60,0	1/1:3,11:14:30.08:340,30,0	1/1:3,13:16:39.11:441,39,0	1/1:1,18:19:42.12:476,42,0	1/1:0,8:8:24.07:272,24,0	1/1:1,25:26:72.20:815,72,0	1/1:1,12:13:27.03:293,27,0	0/0:6,0:6:15.05:0,15,203
chr10	96282219	.	G	GGGT	72.79	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=-3.446;DP=410;FS=5.976;HRun=0;HaplotypeScore=113.0924;InbreedingCoeff=0.6077;MQ=61.30;MQ0=1;MQRankSum=-3.695;QD=1.35;ReadPosRankSum=-5.956;VQSLOD=-0.4847;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,6:14:2.85:36,3,0	0/0:6,0:6:13.10:0,13,81	0/0:13,0:9:24.08:0,24,384	0/0:9,0:8:20.99:0,21,321	0/0:14,0:14:0.99:0,1,172	0/0:16,0:16:29.24:0,29,185	0/0:19,0:19:41.54:0,42,279	0/0:19,0:19:51.65:0,52,720	0/0:18,0:18:17.92:0,18,232	0/1:22,0:22:9.35:9,0,245	0/0:18,0:18:38.51:0,39,255	0/0:24,0:24:40.56:0,41,367	0/0:14,0:14:25.68:0,26,178	0/0:18,0:17:34.47:0,34,232	0/0:14,0:14:29.67:0,30,199	1/1:5,0:5:13.42:86,13,0	1/1:4,0:4:5.93:61,6,0	0/1:8,0:8:0.30:12,0,0	0/0:10,0:9:4.54:0,5,101	0/0:11,0:10:23.74:0,24,160	0/0:27,0:27:63.12:0,63,422	0/0:17,0:17:35.66:0,36,248	0/0:16,0:16:38.51:0,39,255	0/0:19,0:19:41.54:0,42,279	0/0:8,0:8:12.41:0,12,128	0/0:27,0:27:41.83:0,42,409	0/0:13,0:13:27.18:0,27,180	0/0:6,0:6:15.05:0,15,245
chr10	96282401	.	TA	T	2124.66	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=7.966;DP=432;FS=2.390;HRun=13;HaplotypeScore=114.1929;InbreedingCoeff=0.8827;MQ=56.67;MQ0=6;MQRankSum=-0.847;QD=8.11;ReadPosRankSum=3.694;VQSLOD=2.8866;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:62.98:0,63,582	1/1:1,0:8:12.69:37,13,0	0/0:14,0:5:11.17:0,11,75	0/0:15,0:5:8.64:0,9,51	1/1:3,1:15:16.97:62,17,0	1/1:5,11:17:32.78:241,33,0	1/1:2,11:12:26.83:197,27,0	0/0:27,0:28:56.92:0,57,534	1/1:3,11:14:26.81:197,27,0	1/1:6,21:27:62.58:455,63,0	1/1:4,12:17:17.82:131,18,0	1/1:4,12:17:28.81:203,29,0	1/1:0,7:7:14.88:109,15,0	1/1:3,7:9:20.87:153,21,0	1/1:2,0:13:20.37:59,20,0	0/0:10,1:11:5.07:0,5,196	0/0:27,1:29:37.20:0,37,522	0/0:27,0:26:51.97:0,52,498	1/1:5,0:10:10.17:29,10,0	1/1:5,0:11:11.04:31,11,0	1/1:4,0:10:6.08:18,6,0	1/1:2,6:8:11.89:87,12,0	1/1:4,8:14:15.88:99,16,0	1/1:4,8:12:8.53:65,9,0	1/1:1,0:10:14.24:41,14,0	1/1:6,1:20:27.41:92,27,0	1/1:4,0:7:6.10:18,6,0	0/0:16,0:16:30.03:0,30,284
chr10	96282423	.	GGTGTGTGTGTGTGTGTGTGTGT	G	848.70	PASS	AB=0.988;AC=11;AF=0.229;AN=48;BaseQRankSum=1.263;DP=401;FS=2.091;HRun=0;HaplotypeScore=245.7354;InbreedingCoeff=0.1944;MQ=54.29;MQ0=29;MQRankSum=-0.706;QD=5.44;ReadPosRankSum=-0.272;VQSLOD=2.6334;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:70.58:129,0,71	0/0:7,0:7:12:0,12,120	0/0:21,0:8:6.02:0,6,106	0/0:20,0:7:9.03:0,9,177	0/0:15,0:16:21.07:0,21,534	0/1:14,0:13:1.36:2,0,1	./.	1/1:20,8:27:25.12:217,25,0	0/0:15,0:12:2.60:0,3,10	0/1:21,0:21:32.40:32,0,61	./.	0/0:12,0:12:2.27:0,2,10	0/1:7,0:7:1.29:1,0,18	0/0:7,0:6:5.78:0,6,26	0/0:18,0:16:9.03:0,9,162	0/0:10,0:8:2.99:0,3,24	1/1:20,0:19:5.33:27,5,0	0/1:18,0:18:84.86:253,0,85	0/0:14,0:14:20.97:0,21,398	0/0:6,0:6:3.01:0,3,49	0/0:18,0:14:12.04:0,12,339	./.	./.	0/1:6,0:5:0:0,0,0	0/0:13,0:12:6.02:0,6,125	0/0:20,0:18:21.06:0,21,509	0/0:7,0:7:12.89:0,13,166	0/1:14,0:11:5.71:314,0,6
chr10	96282432	.	G	GTC	1134.04	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=7.460;DP=382;FS=0.000;HRun=0;HaplotypeScore=116.5942;InbreedingCoeff=0.6186;MQ=47.73;MQ0=64;MQRankSum=-1.717;QD=7.13;ReadPosRankSum=1.821;VQSLOD=3.2095;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:19:38.16:0,38,279	0/1:11,0:10:8.71:9,0,82	0/0:19,0:6:5.43:0,5,82	0/0:19,0:6:11.88:0,12,96	0/0:20,0:18:17.08:0,17,205	1/1:11,2:12:26.20:210,26,0	1/1:10,1:7:11.85:81,12,0	0/0:20,0:18:41.95:0,42,350	1/1:10,1:8:12:107,12,0	1/1:18,1:18:53.62:422,54,0	1/1:11,2:11:11.98:99,12,0	1/1:10,2:10:11.96:116,12,0	1/1:4,2:6:11.77:76,12,0	1/1:5,1:4:11.90:108,12,0	0/1:17,0:15:5.79:6,0,93	0/0:6,0:4:5.97:0,6,45	0/0:17,0:13:23.60:0,24,162	0/0:17,0:14:0.50:0,1,170	0/0:15,0:13:28.91:0,29,249	0/0:7,0:6:8.95:0,9,68	0/0:22,0:14:14.70:0,15,156	1/1:8,0:5:2.99:24,3,0	1/1:7,2:8:2.95:23,3,0	1/1:9,0:6:3:25,3,0	0/0:12,0:10:17.97:0,18,147	0/0:18,0:16:18.06:0,18,294	0/0:8,0:6:11.92:0,12,90	0/1:14,0:9:25.54:26,0,73
chr10	96282450	.	G	GTC	221.88	PASS	AB=0.977;AC=11;AF=0.220;AN=50;BaseQRankSum=2.476;DP=334;FS=7.474;HRun=0;HaplotypeScore=99.5412;InbreedingCoeff=-0.0200;MQ=33.39;MQ0=81;MQRankSum=-0.218;QD=1.76;ReadPosRankSum=5.910;VQSLOD=0.4272;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:12:20.47:0,20,134	0/1:10,0:9:9.83:10,0,51	0/0:3,0:2:5.97:0,6,45	0/0:8,0:3:8.98:0,9,74	0/0:24,0:22:11.03:0,11,156	0/1:9,0:8:6.49:6,0,8	./.	0/1:18,0:12:58.08:123,0,58	1/1:7,0:4:1.55:4,2,0	0/0:15,0:14:25.14:0,25,149	./.	0/1:12,0:8:8.24:8,0,9	0/0:4,0:4:8.39:0,8,40	0/1:5,0:3:4.89:5,0,23	0/1:19,0:16:2.89:3,0,104	0/0:4,0:2:2.98:0,3,21	0/0:15,0:10:5.55:0,6,34	0/1:16,0:10:6.19:6,0,90	0/0:10,0:8:19.80:0,20,148	0/0:5,0:3:2.99:0,3,24	0/0:26,0:18:11.46:0,11,133	./.	0/0:8,0:7:0:0,0,0	0/1:11,0:5:0:0,0,0	0/0:11,0:9:5.99:0,6,50	0/0:19,0:16:41.33:0,41,296	0/0:11,0:8:12.81:0,13,91	0/1:14,5:13:99:168,0,120
chr10	96282466	.	G	GTC	508.39	PASS	AB=0.947;AC=20;AF=0.526;AN=38;BaseQRankSum=0.546;DP=334;FS=7.409;HRun=0;HaplotypeScore=100.2464;InbreedingCoeff=0.1662;MQ=34.57;MQ0=76;MQRankSum=-1.986;QD=3.56;ReadPosRankSum=1.986;VQSLOD=1.8327;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:24:25.30:0,25,152	0/1:8,0:7:13.73:20,0,14	./.	./.	1/1:23,3:24:3.74:78,4,0	1/1:4,0:3:3.01:47,3,0	./.	0/0:24,0:18:29.50:0,29,192	1/1:4,0:1:3.01:37,3,0	1/1:7,0:6:8.97:93,9,0	./.	1/1:9,0:5:3.01:48,3,0	1/1:4,0:4:5.90:37,6,0	1/1:4,0:2:5.97:68,6,0	0/1:13,5:15:24.68:68,0,25	0/0:8,0:6:11.84:0,12,80	0/0:25,0:20:10.93:0,11,77	0/0:22,0:17:16.27:0,16,137	0/1:8,1:7:36.96:53,0,37	./.	0/0:31,0:23:5.36:0,5,52	./.	./.	./.	./.	0/1:17,0:14:79.62:80,0,89	0/1:13,0:10:12.87:13,0,25	0/1:20,0:15:6.39:6,0,123
chr10	96282476	.	GTGTCTGTGTC	G	1559.11	PASS	AB=0.916;AC=33;AF=0.688;AN=48;BaseQRankSum=-0.042;DP=358;FS=3.673;HRun=0;HaplotypeScore=120.5315;InbreedingCoeff=0.5016;MQ=35.67;MQ0=66;MQRankSum=-1.150;QD=6.75;ReadPosRankSum=0.651;VQSLOD=2.4227;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:25:26.44:0,26,122	1/1:7,0:6:1.64:5,2,0	./.	./.	0/1:7,18:23:13.59:14,0,64	1/1:11,0:8:5.72:29,6,0	0/1:11,0:4:0:0,0,0	0/0:32,0:24:51.52:0,52,939	1/1:8,0:5:5.64:29,6,0	1/1:11,0:9:12.80:66,13,0	./.	1/1:7,0:4:2.88:15,3,0	1/1:6,0:6:2.88:15,3,0	1/1:7,0:6:6.21:33,6,0	1/1:19,0:17:14.63:236,15,0	0/0:9,0:7:9.45:0,9,53	0/1:24,0:21:1.88:17,0,2	1/1:24,0:18:6.04:154,6,0	1/1:8,0:5:15.05:311,15,0	./.	0/0:29,0:25:5.61:0,6,49	1/1:5,0:1:2.90:16,3,0	0/1:4,0:4:0:0,0,0	0/1:13,0:8:0.08:0,0,0	1/1:14,0:11:3.01:54,3,0	1/1:13,0:10:26.83:433,27,0	1/1:13,0:11:15.01:280,15,0	0/0:18,0:13:30.60:0,31,680
chr10	96282482	.	GTGTC	G	1042.49	PASS	AB=1.000;AC=32;AF=0.667;AN=48;BaseQRankSum=4.580;DP=369;FS=7.527;HRun=0;HaplotypeScore=93.0302;InbreedingCoeff=0.2414;MQ=37.19;MQ0=65;MQRankSum=0.647;QD=4.34;ReadPosRankSum=1.504;VQSLOD=1.2184;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:28:2.47:68,2,0	0/0:6,1:6:0.47:0,0,1	./.	0/0:7,0:1:3.01:0,3,38	0/0:24,0:22:8.75:0,9,119	1/1:9,0:6:5.64:27,6,0	0/1:12,0:5:0.01:0,0,0	0/0:32,0:24:66.22:0,66,1012	1/1:9,0:6:6.93:31,7,0	0/1:13,0:11:6.01:31,0,6	./.	1/1:5,0:2:2.84:14,3,0	1/1:6,0:6:5.68:28,6,0	1/1:6,0:6:5.72:31,6,0	0/1:16,0:14:61.25:132,0,61	1/1:10,0:8:1.41:24,1,0	0/1:27,0:23:6.86:7,0,16	1/1:21,0:16:7.23:56,7,0	1/1:6,2:5:0.79:195,1,0	./.	./.	1/1:5,0:1:2.90:16,3,0	1/1:5,0:5:4.69:21,5,0	0/1:13,0:9:0:0,0,0	1/1:5,9:11:3.01:36,3,0	0/1:13,0:10:38.29:250,0,38	1/1:5,9:12:14.99:212,15,0	0/0:16,0:12:35.77:0,36,600
chr10	96282484	.	GTC	G	752.46	PASS	AB=0.941;AC=33;AF=0.688;AN=48;BaseQRankSum=5.548;DP=378;FS=6.130;HRun=0;HaplotypeScore=88.6617;InbreedingCoeff=0.2337;MQ=38.14;MQ0=62;MQRankSum=1.325;QD=2.96;ReadPosRankSum=1.341;VQSLOD=1.4450;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:28:10.61:51,11,0	1/1:7,0:6:2.90:16,3,0	./.	0/0:13,1:3:0.76:0,1,17	0/0:24,0:22:8.83:0,9,157	1/1:11,0:8:7.46:32,7,0	0/1:15,0:8:0:0,0,0	0/0:30,0:24:66.21:0,66,1134	1/1:7,1:6:6.60:31,7,0	0/1:13,0:11:1.43:56,0,1	./.	1/1:6,0:3:2.84:14,3,0	1/1:6,0:6:5.68:28,6,0	1/1:6,0:6:5.77:31,6,0	0/1:16,1:15:63.57:64,0,87	1/1:10,0:8:6.57:33,7,0	0/1:12,15:23:26.85:74,0,27	1/1:10,12:16:20.46:249,20,0	0/1:8,0:5:35.26:50,0,35	./.	./.	1/1:5,0:1:2.88:15,3,0	1/1:5,0:5:4.82:20,5,0	0/1:14,0:10:0.06:0,0,0	1/1:14,0:10:0.47:1,0,0	0/1:13,0:10:53.71:54,0,107	1/1:13,1:12:14.05:75,14,0	0/0:16,0:12:35.54:0,36,573
chr10	96282488	.	GTGTC	G	1551.60	PASS	AB=0.855;AC=29;AF=0.580;AN=50;BaseQRankSum=4.522;DP=403;FS=0.000;HRun=0;HaplotypeScore=93.2690;InbreedingCoeff=0.4638;MQ=42.95;MQ0=62;MQRankSum=0.720;QD=6.84;ReadPosRankSum=2.179;VQSLOD=1.4090;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:31:18.37:104,18,0	0/0:7,0:6:3.01:0,3,40	0/0:11,0:3:4.19:0,4,21	0/0:23,0:6:8.20:0,8,126	0/0:24,0:22:8.75:0,9,109	1/1:7,7:11:18.06:292,18,0	0/1:5,9:8:0:0,0,0	0/0:32,0:26:72.18:0,72,1065	1/1:3,5:6:9.03:152,9,0	1/1:6,7:11:24.06:380,24,0	./.	1/1:5,2:5:9.03:144,9,0	1/1:1,5:6:8.94:116,9,0	1/1:0,7:7:5.96:99,6,0	0/0:17,0:15:4.34:0,4,82	1/1:11,0:9:6.79:31,7,0	1/1:28,0:24:6.21:44,6,0	1/1:22,0:16:22.51:92,23,0	0/1:9,0:5:27.90:36,0,28	./.	./.	1/1:4,3:3:3.01:49,3,0	1/1:3,2:5:6.02:91,6,0	0/1:6,7:10:0:0,0,0	0/0:14,0:10:0.47:0,0,1	0/1:13,0:10:8.69:9,0,101	0/1:13,0:11:18.07:71,0,18	0/0:14,0:10:27.09:0,27,533
chr10	96282490	.	GTC	G	1320.94	PASS	AB=0.986;AC=27;AF=0.500;AN=54;BaseQRankSum=3.318;DP=411;FS=16.392;HRun=0;HaplotypeScore=88.0524;InbreedingCoeff=0.5388;MQ=43.22;MQ0=61;MQRankSum=-0.687;QD=6.32;ReadPosRankSum=1.196;VQSLOD=1.6612;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,25:30:33.04:476,33,0	0/1:7,0:6:0.28:0,0,43	0/0:13,0:3:0.47:0,0,1	0/0:26,0:8:6.66:0,7,153	0/0:23,0:21:8.50:0,9,94	1/1:13,0:11:16.72:96,17,0	0/1:14,0:8:0:0,0,0	0/0:33,0:27:75.13:0,75,1256	1/1:9,0:7:11.22:67,11,0	1/1:13,0:11:18.75:92,19,0	0/0:4,0:3:1.55:0,2,4	1/1:7,0:5:8.39:47,8,0	1/1:6,0:6:8.70:48,9,0	1/1:7,0:7:5.80:31,6,0	0/0:17,1:16:23.61:0,24,208	1/1:3,8:9:15.05:229,15,0	0/1:27,0:23:10.23:91,0,10	1/1:22,0:16:22.63:273,23,0	0/0:9,0:5:12.81:0,13,88	./.	0/0:26,0:22:3:0,3,25	1/1:7,0:3:2.90:16,3,0	1/1:5,0:5:4.90:18,5,0	0/1:13,0:9:0.06:0,0,0	0/0:14,0:10:3:0,3,27	0/0:14,0:11:1.52:0,2,210	0/1:12,1:11:6.61:7,0,47	0/0:14,0:10:27.09:0,27,511
chr10	96282494	.	G	GTC	623.01	PASS	AB=0.964;AC=21;AF=0.389;AN=54;BaseQRankSum=2.374;DP=429;FS=9.172;HRun=0;HaplotypeScore=96.4588;InbreedingCoeff=0.3277;MQ=45.97;MQ0=53;MQRankSum=-2.340;QD=3.64;ReadPosRankSum=0.275;VQSLOD=1.7491;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:32:16.90:17,0,250	0/0:8,0:8:6.02:0,6,89	0/0:21,0:4:5.95:0,6,52	0/0:27,1:10:18.85:0,19,207	0/0:20,0:19:5.94:0,6,55	1/1:13,0:11:17.97:158,18,0	0/0:15,0:9:2.99:0,3,24	0/0:34,0:29:71.98:0,72,1047	1/1:9,0:8:8.12:89,8,0	1/1:12,0:10:1.98:185,2,0	1/1:4,0:3:2.22:7,2,0	1/1:7,0:5:8.98:77,9,0	1/1:7,0:7:4.21:61,4,0	0/1:8,0:8:10.96:55,0,11	0/0:20,0:18:26.81:0,27,298	0/0:11,0:9:14.99:0,15,132	0/1:24,2:22:37.90:38,0,74	0/1:22,1:19:17.99:18,0,164	0/0:9,0:6:6.40:0,6,117	./.	0/0:27,0:24:6:0,6,67	1/1:6,0:3:3.01:33,3,0	1/1:5,0:5:5.52:47,6,0	0/0:17,0:13:11.92:0,12,88	0/0:13,0:9:2.96:0,3,19	0/1:13,1:13:4.09:4,0,337	0/0:13,0:11:1.16:0,1,114	0/0:13,0:9:27.09:0,27,408
chr10	96283473	.	TGCATTAAGACCG	T	3226.07	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.175;DP=680;FS=17.877;HRun=0;HaplotypeScore=241.7728;InbreedingCoeff=0.9641;MQ=85.26;MQ0=0;MQRankSum=-9.317;QD=38.41;ReadPosRankSum=2.380;VQSLOD=1.9626;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,25:35:39.13:1350,39,0	0/0:9,0:9:27.09:0,27,1411	0/0:25,0:25:60.18:0,60,2687	0/0:20,0:20:42.06:0,42,1539	0/0:25,0:25:60.21:0,60,3443	0/0:33,0:33:84.29:0,84,4757	0/0:22,0:22:60.21:0,60,3446	0/0:37,0:37:78.21:0,78,3832	0/0:31,0:31:78.25:0,78,4245	0/0:33,0:33:93.32:0,93,5286	0/0:25,0:25:60.20:0,60,3409	0/0:23,0:23:45.15:0,45,2549	0/0:26,0:26:75.26:0,75,4185	0/0:24,0:24:57.18:0,57,2984	0/0:32,0:32:69.22:0,69,3737	1/1:7,17:24:36.12:1296,36,0	1/1:3,7:10:15.05:517,15,0	1/1:9,6:15:6.02:216,6,0	0/0:24,0:24:60.21:0,60,3050	0/0:19,0:19:51.18:0,51,2641	0/0:34,0:34:87.28:0,87,4621	0/0:22,0:22:57.20:0,57,3298	0/0:18,0:18:45.15:0,45,2582	0/0:22,0:22:60.20:0,60,3281	0/0:23,0:23:66.23:0,66,3863	0/0:25,0:25:69.24:0,69,3925	0/0:37,0:37:99:0,99,5769	0/0:7,0:7:21.07:0,21,1260
chr10	96283908	.	GTTTA	G	2662.11	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=4.747;DP=533;FS=2.800;HRun=0;HaplotypeScore=210.9258;InbreedingCoeff=0.6674;MQ=55.18;MQ0=5;MQRankSum=-5.035;QD=7.97;ReadPosRankSum=2.471;VQSLOD=2.4822;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:48.40:0,48,353	1/1:7,0:7:6.01:54,6,0	0/0:44,0:24:29.39:0,29,408	0/1:35,0:19:13.49:13,0,219	0/0:16,0:16:15:0,15,46	1/1:16,1:17:37.25:249,37,0	1/1:9,0:8:16.87:82,17,0	0/0:45,0:45:99:0,117,1323	1/1:13,0:13:27.69:142,28,0	1/1:14,6:20:47.44:405,47,0	1/1:17,0:17:23.08:208,23,0	1/1:16,0:16:31.80:199,32,0	1/1:15,0:15:34.45:183,34,0	1/1:12,1:13:31.52:167,32,0	0/1:23,0:23:10.53:112,0,11	0/0:20,0:20:41.86:0,42,427	0/0:30,0:30:65.21:0,65,582	0/0:13,0:13:21.09:0,21,189	1/1:20,0:19:35.33:195,35,0	0/1:19,0:19:10.32:34,0,10	1/1:12,0:10:14.58:100,15,0	1/1:14,0:14:19.32:94,19,0	1/1:13,2:15:30.37:204,30,0	1/1:11,0:11:22.74:138,23,0	1/1:12,0:13:6.06:100,6,0	1/1:18,0:17:23.69:156,24,0	0/1:26,0:25:20.47:33,0,20	0/0:11,0:11:29.91:0,30,399
chr10	96283910	.	TTA	T	5134.15	PASS	AB=0.971;AC=19;AF=0.339;AN=56;BaseQRankSum=2.307;DP=518;FS=6.102;HRun=0;HaplotypeScore=184.9676;InbreedingCoeff=0.8966;MQ=53.92;MQ0=5;MQRankSum=-4.878;QD=28.52;ReadPosRankSum=2.449;VQSLOD=5.8775;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.14:0,54,831	1/1:0,6:7:18.06:262,18,0	0/0:40,0:23:41.35:0,41,724	0/1:32,1:17:5.80:6,0,324	1/1:1,8:15:27.01:360,27,0	0/0:16,0:16:32.36:0,32,329	0/0:9,0:8:23.96:0,24,240	0/0:46,0:46:98.92:0,99,2244	0/0:12,0:12:32.88:0,33,313	0/0:21,0:21:37.54:0,38,354	0/0:16,0:16:38.89:0,39,423	0/0:16,0:16:28.29:0,28,401	0/0:16,0:16:41.81:0,42,426	0/0:13,0:13:38.79:0,39,375	1/1:0,20:23:69.23:1029,69,0	0/0:19,0:19:57.19:0,57,990	0/0:29,0:29:69.67:0,70,1192	0/0:14,0:14:27.35:0,27,463	1/1:2,6:16:48.15:690,48,0	1/1:2,8:18:33.07:462,33,0	1/1:1,7:7:0.87:155,1,0	0/0:13,0:13:38.63:0,39,392	0/0:15,0:15:39.04:0,39,398	0/0:11,0:11:23.19:0,23,190	1/1:2,10:13:33.11:488,33,0	1/1:3,12:17:51.14:676,51,0	1/1:3,23:25:66.22:1006,66,0	0/0:11,0:11:33.03:0,33,477
chr10	96283928	.	GT	G	4779.51	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=2.691;DP=541;FS=8.024;HRun=3;HaplotypeScore=210.9409;InbreedingCoeff=0.8892;MQ=41.57;MQ0=6;MQRankSum=-2.616;QD=24.76;ReadPosRankSum=2.703;VQSLOD=3.1272;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:98.92:99,0,146	0/0:7,0:7:20.22:0,20,145	0/0:26,0:14:15.04:0,15,409	0/0:29,0:17:46.95:0,47,620	0/0:20,0:20:32.27:0,32,362	1/1:15,1:16:45.12:492,45,0	1/1:10,0:9:27:272,27,0	0/0:45,0:46:99:0,119,1617	1/1:11,2:13:33.09:373,33,0	1/1:23,2:25:63.11:665,63,0	1/1:14,2:16:45.12:494,45,0	1/1:13,1:14:36.46:382,36,0	1/1:16,1:17:48.12:528,48,0	1/1:13,0:13:32.76:346,33,0	0/0:27,0:27:78.81:0,79,633	0/0:16,0:16:6.49:0,6,174	0/0:29,0:29:73.71:0,74,877	0/0:17,0:17:23.30:0,23,361	0/0:22,0:20:43.45:0,43,305	0/0:21,0:21:43.70:0,44,340	0/0:9,0:7:13.60:0,14,77	1/1:17,1:18:44.95:501,45,0	1/1:16,1:17:51.13:562,51,0	1/1:11,0:11:5.34:64,5,0	0/0:14,0:14:34.60:0,35,266	0/0:25,0:24:39.78:0,40,455	0/0:25,0:25:74.83:0,75,636	0/0:13,0:13:27.08:0,27,369
chr10	96283929	.	T	TTG	4489.12	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=3.986;DP=531;FS=9.522;HRun=0;HaplotypeScore=223.4534;InbreedingCoeff=0.7730;MQ=40.13;MQ0=6;MQRankSum=-6.423;QD=20.78;ReadPosRankSum=2.230;VQSLOD=4.1078;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:81.28:81,0,187	0/0:7,0:7:10.27:0,10,117	0/0:25,0:14:13.22:0,13,434	0/0:28,0:16:40.74:0,41,640	0/0:19,0:19:22.35:0,22,313	1/1:8,7:15:45.05:456,45,0	1/1:6,4:9:26.88:220,27,0	0/0:42,0:42:96.83:0,97,1697	1/1:6,7:13:36.04:366,36,0	1/1:14,11:25:63.07:690,63,0	1/1:5,11:16:47.98:463,48,0	1/1:4,10:14:35.97:325,36,0	1/1:5,12:17:47.99:446,48,0	1/1:4,9:13:33.04:340,33,0	0/0:27,0:27:49.99:0,50,569	0/1:15,0:15:17.82:18,0,167	0/0:29,0:29:73.12:0,73,934	0/0:18,0:18:17.57:0,18,426	0/0:22,0:20:36.71:0,37,228	0/0:20,0:20:41.14:0,41,323	0/1:9,0:7:14.84:15,0,74	1/1:9,9:18:47.97:427,48,0	1/1:7,10:17:50.98:466,51,0	1/1:10,1:11:16.74:175,17,0	0/0:14,0:14:26.54:0,27,260	0/0:25,0:24:20.62:0,21,381	0/0:25,0:25:74.40:0,74,616	0/0:13,0:13:27.08:0,27,370
chr10	96283932	.	GT	G	3934.38	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=13.316;DP=527;FS=14.173;HRun=3;HaplotypeScore=214.6254;InbreedingCoeff=0.6700;MQ=40.97;MQ0=6;MQRankSum=-7.650;QD=10.17;ReadPosRankSum=5.501;VQSLOD=-0.0197;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,1:22:50.50:341,51,0	1/1:7,0:7:13.74:70,14,0	0/0:26,0:15:24.68:0,25,447	0/0:31,0:19:54.17:0,54,721	1/1:18,0:18:13.64:96,14,0	1/1:6,9:15:40.73:194,41,0	1/1:6,4:10:22.57:124,23,0	0/0:41,0:42:99:0,114,1334	1/1:5,7:12:28.81:120,29,0	1/1:10,14:24:61.02:382,61,0	1/1:2,13:15:34.40:133,34,0	1/1:3,11:14:28.84:117,29,0	1/1:4,13:17:39.71:177,40,0	1/1:1,10:11:25.22:110,25,0	1/1:27,0:27:62.57:263,63,0	1/1:13,2:15:41.54:324,42,0	0/0:29,0:29:1.36:0,1,245	0/1:19,0:19:55.94:56,0,87	0/1:22,0:20:2.38:141,0,2	1/1:18,0:18:38.24:165,38,0	1/1:12,0:10:14.49:85,14,0	1/1:8,9:17:35.98:142,36,0	1/1:6,12:18:40.43:168,40,0	1/1:6,1:7:4.28:22,4,0	1/1:14,1:15:40.55:195,41,0	0/1:25,0:24:3.88:248,0,4	1/1:27,0:27:57.57:261,58,0	0/0:12,0:12:24.08:0,24,344
chr10	96283933	.	T	TTG	10168.36	PASS	AB=0.882;AC=44;AF=0.786;AN=56;BaseQRankSum=12.306;DP=528;FS=10.811;HRun=0;HaplotypeScore=206.2548;InbreedingCoeff=0.5790;MQ=41.11;MQ0=6;MQRankSum=-7.351;QD=24.27;ReadPosRankSum=5.740;VQSLOD=4.5819;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,14:22:51.69:798,52,0	1/1:4,3:7:14.43:166,14,0	0/0:25,0:15:32.57:0,33,482	0/0:30,0:19:54.18:0,54,782	1/1:11,7:18:42.33:356,42,0	1/1:10,5:15:45.02:481,45,0	1/1:8,4:12:27.51:373,28,0	0/0:42,0:42:95.89:0,96,1553	1/1:7,3:10:30.01:324,30,0	1/1:17,7:24:64.04:817,64,0	1/1:13,2:15:39.94:354,40,0	1/1:13,1:14:35.66:298,36,0	1/1:14,3:17:47.84:475,48,0	1/1:11,1:12:32.95:315,33,0	1/1:11,16:27:70.79:666,71,0	1/1:6,10:16:45.03:669,45,0	0/1:29,0:29:90.56:91,0,218	0/1:19,0:19:99:162,0,112	0/1:17,6:21:4.42:388,0,4	1/1:11,8:19:44.99:431,45,0	1/1:10,2:10:19.57:208,20,0	1/1:11,5:16:41.90:444,42,0	1/1:13,4:17:48.06:464,48,0	1/1:6,2:8:4.74:74,5,0	1/1:9,6:15:45.04:421,45,0	0/1:16,9:24:10.48:662,0,10	1/1:8,19:27:75.54:729,76,0	0/0:12,0:12:24.08:0,24,345
chr10	96283936	.	GT	G	3919.55	PASS	AB=0.773;AC=46;AF=0.821;AN=56;BaseQRankSum=6.571;DP=518;FS=10.987;HRun=3;HaplotypeScore=211.6187;InbreedingCoeff=0.4794;MQ=41.40;MQ0=6;MQRankSum=-4.197;QD=8.73;ReadPosRankSum=3.012;VQSLOD=-0.0014;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,2:22:40.27:247,40,0	1/1:1,4:5:6.87:48,7,0	0/0:24,0:16:37.21:0,37,502	0/0:33,0:23:60.06:0,60,793	0/1:11,8:19:13.23:13,0,64	1/1:5,9:14:36.80:161,37,0	1/1:8,5:12:25.90:139,26,0	0/1:35,0:35:99:225,0,606	1/1:3,7:10:25.76:106,26,0	1/1:7,14:21:57.55:360,58,0	1/1:4,12:16:38.98:167,39,0	1/1:1,12:13:33.11:142,33,0	1/1:4,13:17:41.99:185,42,0	1/1:3,9:12:27.24:106,27,0	1/1:6,20:26:6.66:107,7,0	1/1:13,2:15:43.55:284,44,0	1/1:26,0:26:34.53:257,35,0	1/1:13,1:19:30.32:192,30,0	0/1:17,7:22:10.65:142,0,11	1/1:10,10:20:18.82:173,19,0	1/1:7,3:8:16.22:102,16,0	1/1:6,11:17:36.51:152,37,0	1/1:5,12:17:37.02:152,37,0	1/1:6,2:8:7.22:41,7,0	1/1:7,8:15:14.87:85,15,0	1/1:13,12:24:2.75:226,3,0	0/1:11,19:28:2.53:109,0,3	0/0:12,0:12:24.05:0,24,285
chr10	96283937	.	T	TTG	11471.58	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=10.381;DP=520;FS=18.062;HRun=0;HaplotypeScore=195.7487;InbreedingCoeff=0.9581;MQ=39.04;MQ0=7;MQRankSum=-7.372;QD=27.58;ReadPosRankSum=5.637;VQSLOD=4.5944;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,16:21:46.93:565,47,0	1/1:5,0:5:15.02:169,15,0	0/0:24,0:16:38.80:0,39,528	0/0:33,0:23:59.87:0,60,854	1/1:12,7:19:34.79:387,35,0	1/1:9,5:14:41.99:410,42,0	1/1:7,6:12:29.91:328,30,0	0/0:35,0:34:42.10:0,42,751	1/1:7,3:10:30:291,30,0	1/1:15,7:22:58.74:716,59,0	1/1:13,3:17:40.89:367,41,0	1/1:12,1:13:38.85:317,39,0	1/1:14,3:17:47.83:439,48,0	1/1:11,1:12:32.91:271,33,0	1/1:21,5:26:77.83:738,78,0	1/1:5,10:15:44.56:557,45,0	1/1:7,19:26:58.86:887,59,0	1/1:10,9:19:38.99:537,39,0	1/1:18,6:22:11.08:551,11,0	1/1:15,5:20:53.92:621,54,0	1/1:5,5:8:16.73:218,17,0	1/1:12,5:17:44.85:407,45,0	1/1:13,4:17:46.66:427,47,0	1/1:6,2:8:7.68:78,8,0	1/1:8,7:15:45.05:500,45,0	1/1:19,7:25:17.19:798,17,0	1/1:24,6:28:86.92:893,87,0	0/0:12,0:12:24:0,24,282
chr10	96283940	.	GT	G	9007.60	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=10.506;DP=525;FS=16.182;HRun=3;HaplotypeScore=194.7862;InbreedingCoeff=0.8192;MQ=42.01;MQ0=4;MQRankSum=-7.327;QD=19.84;ReadPosRankSum=5.960;VQSLOD=2.7341;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,15:21:51.99:386,52,0	1/1:1,4:5:14.16:90,14,0	0/0:22,0:15:42.13:0,42,545	0/0:32,0:24:57.01:0,57,817	1/1:10,8:18:26.90:152,27,0	1/1:0,14:14:42.11:461,42,0	1/1:3,10:12:32.89:315,33,0	0/1:34,0:33:99:242,0,363	1/1:2,10:12:36.10:405,36,0	1/1:1,21:22:66.15:707,66,0	1/1:0,17:17:51.14:568,51,0	1/1:0,13:13:39.11:436,39,0	1/1:0,18:18:48.13:530,48,0	1/1:2,10:12:31.33:345,31,0	1/1:6,20:26:69.19:322,69,0	1/1:3,12:15:44.74:356,45,0	1/1:26,1:27:62.90:415,63,0	1/1:16,2:18:35.20:250,35,0	1/1:14,10:23:54.86:375,55,0	1/1:6,12:18:49.16:289,49,0	1/1:7,3:8:20.47:145,20,0	1/1:3,14:17:44.92:491,45,0	1/1:1,16:17:48.11:518,48,0	1/1:6,4:10:11.69:122,12,0	1/1:6,9:15:41.08:217,41,0	1/1:14,12:25:64.43:453,64,0	1/1:11,21:31:80.74:417,81,0	0/0:17,0:17:20.77:0,21,197
chr10	96283941	.	T	TTG	16323.80	PASS	AB=0.575;AC=50;AF=0.893;AN=56;BaseQRankSum=9.625;DP=558;FS=7.302;HRun=0;HaplotypeScore=193.7235;InbreedingCoeff=0.6197;MQ=42.78;MQ0=4;MQRankSum=-8.421;QD=32.45;ReadPosRankSum=6.347;VQSLOD=5.5817;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,2:23:57.04:842,57,0	1/1:5,0:5:15.04:179,15,0	0/0:23,0:16:42.13:0,42,595	0/0:32,0:25:69.02:0,69,940	1/1:12,7:19:47.60:506,48,0	1/1:15,0:15:45.10:525,45,0	1/1:14,0:14:39.07:553,39,0	0/1:10,23:34:99:955,0,226	1/1:14,0:14:42.10:493,42,0	1/1:24,0:24:72.22:990,72,0	1/1:17,0:17:47.82:514,48,0	1/1:15,0:15:42.08:445,42,0	1/1:18,0:18:48.10:539,48,0	1/1:12,0:12:31.29:307,31,0	1/1:21,5:26:78.12:875,78,0	1/1:15,0:15:45.06:692,45,0	1/1:14,18:32:75.11:1050,75,0	1/1:12,8:20:39.12:621,39,0	1/1:22,4:25:60.91:847,61,0	1/1:19,3:22:63.16:848,63,0	1/1:7,5:10:24.03:288,24,0	1/1:18,1:19:51.09:647,51,0	1/1:17,0:17:48.06:543,48,0	1/1:12,0:12:17.55:268,18,0	1/1:9,6:15:45.12:529,45,0	1/1:19,7:25:66.48:993,66,0	1/1:26,6:30:93.17:1086,93,0	0/1:4,13:17:99:189,0,140
chr10	96284493	.	AT	A	3593.94	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-6.646;DP=433;FS=0.827;HRun=10;HaplotypeScore=62.1474;InbreedingCoeff=0.9829;MQ=76.74;MQ0=1;MQRankSum=-0.157;QD=21.39;ReadPosRankSum=2.328;VQSLOD=4.6456;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39.09:0,39,422	1/1:0,7:7:21:182,21,0	0/0:11,0:8:14.49:0,14,124	0/0:20,0:19:25.79:0,26,255	1/1:2,33:35:35.63:765,36,0	0/0:4,0:23:48.02:0,48,253	0/0:6,0:15:28.76:0,29,171	0/0:23,0:24:66:0,66,704	0/0:3,0:14:28.57:0,29,154	0/0:5,0:18:38.97:0,39,191	0/0:4,0:16:31.41:0,31,168	0/0:2,0:7:17.21:0,17,104	0/0:0,0:7:19.89:0,20,99	0/0:2,0:13:25.73:0,26,139	1/1:2,9:11:23.88:208,24,0	0/0:15,0:15:39.07:0,39,408	0/0:18,0:18:51.12:0,51,555	0/0:18,0:18:51.06:0,51,537	1/1:3,15:18:44.96:386,45,0	1/1:3,20:23:53.97:468,54,0	1/1:0,8:8:21:182,21,0	0/0:1,0:7:17.04:0,17,85	0/0:1,0:13:28.57:0,29,161	0/0:0,0:7:19.89:0,20,99	1/1:2,10:12:15.52:220,16,0	1/1:3,17:21:39.63:427,40,0	1/1:3,30:33:86.98:755,87,0	0/0:4,0:4:12.03:0,12,133
chr10	96284879	.	GA	G	1513.78	PASS	AB=0.824;AC=21;AF=0.375;AN=56;BaseQRankSum=-7.813;DP=490;FS=12.214;HRun=13;HaplotypeScore=82.1783;InbreedingCoeff=0.6845;MQ=49.83;MQ0=18;MQRankSum=3.617;QD=7.11;ReadPosRankSum=4.695;VQSLOD=1.2491;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:32:37.16:0,37,203	0/0:4,0:9:8.37:0,8,36	0/0:11,1:5:8.83:0,9,70	0/1:7,1:5:2.02:2,0,24	0/0:7,0:32:26.74:0,27,149	1/1:7,12:17:32.65:258,33,0	0/0:16,0:16:23.16:0,23,247	0/1:23,3:24:8.93:9,0,365	1/1:7,9:15:20.77:153,21,0	0/1:8,9:17:1.52:149,0,2	1/1:4,14:18:26.76:197,27,0	0/1:8,7:15:5.38:129,0,5	1/1:1,9:10:17.89:130,18,0	1/1:0,11:11:23.86:175,24,0	0/0:5,0:12:17.43:0,17,82	0/0:9,0:18:27.17:0,27,163	0/0:4,0:22:37.15:0,37,195	0/0:8,0:25:34.97:0,35,174	0/0:6,0:13:22.73:0,23,114	0/0:9,0:22:29.73:0,30,148	0/0:8,0:7:0.47:0,0,1	1/1:2,9:11:22.16:158,22,0	1/1:5,11:16:17.83:131,18,0	1/1:4,12:15:29.81:219,30,0	0/0:14,0:16:30.38:0,30,177	0/0:7,0:21:32.96:0,33,184	0/1:8,0:28:1.21:1,0,25	0/0:8,0:5:9:0,9,81
chr10	96285428	.	GA	G	2418.25	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.553;DP=627;FS=11.302;HRun=11;HaplotypeScore=72.4633;InbreedingCoeff=0.9385;MQ=72.94;MQ0=0;MQRankSum=-3.989;QD=19.35;ReadPosRankSum=5.727;VQSLOD=3.7331;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,34:38:92.85:764,93,0	0/0:5,0:5:15.03:0,15,153	0/0:18,0:18:39.05:0,39,382	0/0:26,0:22:36.13:0,36,303	0/0:28,0:28:66.17:0,66,704	0/0:20,0:19:48.11:0,48,504	0/0:14,0:15:38.91:0,39,388	0/0:7,0:33:73.59:0,74,375	0/0:20,0:20:45.09:0,45,465	0/0:25,0:27:59.73:0,60,589	0/0:18,0:18:39.08:0,39,406	0/0:11,0:11:24.06:0,24,256	0/0:14,0:14:33.04:0,33,339	0/0:19,0:19:45.09:0,45,466	0/0:18,0:18:39.09:0,39,410	1/1:5,33:38:98.86:813,99,0	1/1:5,27:32:71.79:632,72,0	1/1:1,16:17:44.95:369,45,0	0/0:30,0:33:77.76:0,78,774	0/0:21,0:21:57.12:0,57,593	0/0:17,2:19:1.84:0,2,430	0/0:17,0:17:45.10:0,45,472	0/0:18,0:20:53.80:0,54,540	0/0:24,0:24:60.10:0,60,611	0/0:25,0:27:68.95:0,69,681	0/0:30,0:30:81.20:0,81,863	0/0:23,0:24:68.99:0,69,710	0/0:4,0:15:20.19:0,20,119
chr10	96285595	.	A	ATT	9869.31	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=3.604;DP=579;FS=4.229;HRun=9;HaplotypeScore=90.3012;InbreedingCoeff=0.9872;MQ=76.68;MQ0=1;MQRankSum=-2.820;QD=19.66;ReadPosRankSum=3.994;VQSLOD=3.7065;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:17:42.42:145,42,0	1/1:1,0:9:14.97:51,15,0	0/0:17,0:17:30.05:0,30,315	0/0:16,0:15:17.73:0,18,181	1/1:1,0:31:55.37:199,55,0	1/1:4,16:21:44.64:655,45,0	1/1:2,22:24:63.21:970,63,0	0/0:31,0:31:72.11:0,72,754	1/1:0,18:19:48.16:739,48,0	1/1:2,26:32:86.74:1252,87,0	1/1:1,20:22:63.08:865,63,0	1/1:1,18:18:32.79:508,33,0	1/1:1,13:14:33.11:508,33,0	1/1:3,15:18:42.14:646,42,0	1/1:1,0:18:39.47:135,39,0	1/1:3,0:20:42.42:146,42,0	1/1:4,0:21:42.42:145,42,0	1/1:3,0:11:17.47:60,17,0	1/1:7,0:29:55.38:200,55,0	1/1:1,0:27:57.39:197,57,0	1/1:3,0:23:18.49:131,18,0	1/1:5,11:16:30.06:435,30,0	1/1:3,25:30:68.60:1023,69,0	1/1:1,6:9:23.05:294,23,0	1/1:1,0:19:39.93:137,40,0	1/1:5,0:33:70.37:255,70,0	1/1:0,0:20:49.78:171,50,0	0/0:13,0:13:33.07:0,33,351
chr10	96286480	.	AAGAGAGAG	A	1776.30	PASS	AB=1.000;AC=15;AF=0.288;AN=52;BaseQRankSum=4.255;DP=501;FS=8.332;HRun=0;HaplotypeScore=131.2863;InbreedingCoeff=0.8234;MQ=66.52;MQ0=2;MQRankSum=-6.499;QD=10.45;ReadPosRankSum=1.497;VQSLOD=2.0789;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:22:30.08:0,30,883	1/1:3,6:10:13.28:229,13,0	./.	0/1:24,0:17:0.01:0,0,0	1/1:19,10:30:12:222,12,0	0/0:12,0:12:18.06:0,18,601	0/0:16,0:20:31.66:0,32,910	0/0:24,0:24:6.49:0,6,149	0/0:8,0:18:11.66:0,12,461	0/0:21,0:23:21.07:0,21,663	0/0:15,0:16:15.05:0,15,434	0/0:8,0:11:20.94:0,21,512	0/0:15,0:16:21.07:0,21,767	0/0:9,0:9:9.03:0,9,285	1/1:12,8:21:12.04:260,12,0	0/0:14,0:13:24.08:0,24,865	0/0:17,0:23:30.10:0,30,964	0/0:16,0:16:25.64:0,26,713	0/0:14,0:14:0.89:0,1,2	1/1:8,6:14:9.03:221,9,0	./.	0/0:17,0:25:15.05:0,15,410	0/0:14,0:14:24.08:0,24,739	0/0:5,0:9:9.03:0,9,332	1/1:22,5:27:15.05:371,15,0	1/1:21,4:26:17.92:370,18,0	1/1:11,6:18:11.97:280,12,0	0/0:11,0:13:3.01:0,3,55
chr10	96287095	.	AATTACCTGCTCCCTCTGAC	A	2752.52	PASS	AC=24;AF=0.522;AN=46;BaseQRankSum=6.728;DP=328;FS=16.093;HRun=0;HaplotypeScore=189.5258;InbreedingCoeff=0.7821;MQ=67.71;MQ0=0;MQRankSum=-4.708;QD=26.99;ReadPosRankSum=1.739;VQSLOD=1.4036;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,2:12:6.01:55,6,0	0/0:10,0:10:30.10:0,30,2675	0/0:14,0:13:29.50:0,29,1533	0/0:12,0:11:27.09:0,27,1674	0/0:33,0:32:93.31:0,93,8019	./.	./.	1/1:16,0:16:3:27,3,0	1/1:5,2:7:6.02:314,6,0	1/1:6,3:9:9.03:469,9,0	1/1:8,2:10:9.03:349,9,0	1/1:5,2:7:6.02:313,6,0	1/1:7,0:7:2.92:17,3,0	1/1:8,0:8:6:53,6,0	0/0:17,0:17:51.18:0,51,4023	1/1:5,5:10:18.06:817,18,0	1/1:4,2:6:9.02:339,9,0	./.	0/0:32,0:32:96.33:0,96,6656	0/0:21,0:21:60.19:0,60,4469	0/0:7,0:7:21.07:0,21,1460	./.	1/1:7,1:8:3.01:156,3,0	1/1:2,0:2:2.97:20,3,0	0/0:20,0:20:57.13:0,57,3787	0/0:28,0:28:84.29:0,84,7121	0/0:14,0:14:42.14:0,42,3407	./.
chr10	96287118	.	GATTC	G	793.62	PASS	AC=14;AF=0.389;AN=36;BaseQRankSum=6.856;DP=245;FS=27.845;HRun=0;HaplotypeScore=101.2949;InbreedingCoeff=0.8444;MQ=56.46;MQ0=7;MQRankSum=-6.704;QD=46.68;ReadPosRankSum=3.981;VQSLOD=1.9166;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:14,0:14:42.14:0,42,1216	0/0:16,0:10:30.08:0,30,774	0/0:13,0:12:33.10:0,33,894	0/0:38,0:38:99:0,114,3152	./.	./.	./.	1/1:0,2:2:6.02:111,6,0	1/1:0,3:3:9.03:167,9,0	1/1:0,2:2:6.02:109,6,0	1/1:0,2:2:6.02:111,6,0	./.	./.	0/0:16,0:16:48.16:0,48,1353	1/1:0,5:5:15.05:277,15,0	1/1:0,2:2:6.02:112,6,0	./.	0/0:34,0:30:90.31:0,90,2514	0/0:22,0:22:63.22:0,63,1786	0/0:8,0:8:24.08:0,24,695	./.	1/1:0,1:1:3.01:54,3,0	./.	0/0:17,0:17:51.18:0,51,1477	0/0:27,0:27:81.28:0,81,2323	0/0:21,0:21:63.22:0,63,1703	./.
chr10	96287125	.	ACCCCC	A	875.93	PASS	AC=14;AF=0.389;AN=36;BaseQRankSum=6.861;DP=248;FS=27.876;HRun=5;HaplotypeScore=109.9071;InbreedingCoeff=0.8444;MQ=57.36;MQ0=7;MQRankSum=-6.652;QD=51.53;ReadPosRankSum=4.085;VQSLOD=0.4810;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:14,0:14:42.14:0,42,1398	0/0:16,0:10:27.08:0,27,834	0/0:14,0:14:42.14:0,42,1309	0/0:36,0:36:99:0,108,3481	./.	./.	./.	1/1:0,2:2:6.02:121,6,0	1/1:0,3:3:9.03:183,9,0	1/1:0,2:2:6.02:119,6,0	1/1:0,2:2:6.02:121,6,0	./.	./.	0/0:16,0:16:48.16:0,48,1598	1/1:0,5:5:15.05:301,15,0	1/1:0,2:2:6.02:120,6,0	./.	0/0:34,0:30:90.31:0,90,2974	0/0:22,0:22:66.23:0,66,2132	0/0:8,0:8:24.08:0,24,793	./.	1/1:0,1:1:3.01:59,3,0	./.	0/0:19,0:19:57.20:0,57,1881	0/0:28,0:28:81.25:0,81,2545	0/0:22,0:22:66.23:0,66,2145	./.
chr10	96287139	.	TAAGG	T	901.62	PASS	AC=20;AF=0.476;AN=42;BaseQRankSum=7.332;DP=259;FS=40.724;HRun=0;HaplotypeScore=91.1997;InbreedingCoeff=0.7779;MQ=73.48;MQ0=4;MQRankSum=-5.441;QD=40.98;ReadPosRankSum=2.516;VQSLOD=1.6308;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:13,0:13:39.13:0,39,1089	0/0:17,0:12:36.12:0,36,963	0/0:16,0:16:48.16:0,48,1261	0/0:34,0:34:99:0,99,2704	1/1:1,0:1:3.01:48,3,0	1/1:1,0:1:3.01:34,3,0	./.	1/1:0,2:2:6.02:110,6,0	1/1:0,3:3:9.03:167,9,0	1/1:0,4:4:6.02:108,6,0	1/1:0,2:2:6.02:110,6,0	./.	./.	0/0:16,0:16:48.16:0,48,1269	1/1:0,5:5:15.05:274,15,0	1/1:0,2:2:6.02:109,6,0	./.	0/0:32,0:30:90.30:0,90,2448	0/0:25,0:25:72.25:0,72,1989	0/0:12,0:12:36.12:0,36,992	1/1:1,0:1:3.01:49,3,0	1/1:0,1:1:3.01:54,3,0	./.	0/0:19,0:19:57.20:0,57,1594	0/0:28,0:28:84.29:0,84,2349	0/0:23,0:23:69.23:0,69,1834	./.
chr10	96287642	.	GAGGCAGGCAGGCAGGCAGGC	G	3903.45	PASS	AC=20;AF=0.385;AN=52;BaseQRankSum=0.703;DP=452;FS=11.336;HRun=0;HaplotypeScore=185.3253;InbreedingCoeff=0.7330;MQ=53.81;MQ0=2;MQRankSum=-3.302;QD=26.55;ReadPosRankSum=1.679;VQSLOD=2.0158;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:35:23.22:0,23,183	0/0:4,0:3:6.02:0,6,84	./.	0/0:20,0:12:14.30:0,14,97	0/0:9,0:11:2.94:0,3,18	1/1:4,11:15:9.03:485,9,0	1/1:4,10:14:3.01:162,3,0	0/0:28,0:28:36.11:0,36,725	1/1:5,11:16:15.05:809,15,0	1/1:5,0:5:3.01:40,3,0	./.	1/1:9,8:17:9.03:485,9,0	1/1:4,14:18:21.07:1132,21,0	1/1:8,6:14:9.03:485,9,0	0/0:13,0:21:27.07:0,27,727	0/0:6,0:14:11.90:0,12,85	0/0:10,0:25:8.93:0,9,64	0/0:7,0:13:11.58:0,12,101	0/0:16,0:16:15.04:0,15,265	0/0:12,0:12:12.03:0,12,225	0/0:28,0:39:24.04:0,24,358	1/1:7,4:11:3.01:162,3,0	1/1:8,0:8:6.02:95,6,0	1/1:10,19:29:3.01:50,3,0	0/0:7,0:10:6.02:0,6,139	0/0:6,0:10:15.05:0,15,509	0/0:10,0:21:39.08:0,39,1115	0/0:2,0:2:5.81:0,6,60
chr10	96287984	.	GAAA	G	3928.42	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=1.487;DP=516;FS=3.956;HRun=12;HaplotypeScore=135.9703;InbreedingCoeff=0.9546;MQ=56.51;MQ0=22;MQRankSum=-6.211;QD=23.67;ReadPosRankSum=4.194;VQSLOD=2.0152;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:22:38.20:233,38,0	1/1:0,8:7:17.77:212,18,0	0/0:76,0:20:50.59:0,51,742	0/0:65,1:17:31.24:0,31,395	1/1:4,16:21:44.66:567,45,0	0/0:16,0:16:44.40:0,44,598	0/0:16,0:16:42.14:0,42,640	0/0:5,0:30:81.20:0,81,1061	0/0:16,0:16:48.11:0,48,646	0/0:20,0:20:56.78:0,57,705	0/0:14,0:14:26.87:0,27,342	0/0:15,0:15:38.84:0,39,509	0/0:17,0:17:36.08:0,36,480	0/0:12,0:13:31.15:0,31,363	1/1:1,10:11:30.07:379,30,0	1/1:1,0:10:26.93:162,27,0	1/1:2,0:12:31.44:185,31,0	1/1:5,0:9:8.70:54,9,0	1/1:4,7:11:27.07:339,27,0	1/1:1,9:10:21.03:265,21,0	1/1:1,4:5:0.64:34,1,0	0/0:14,0:14:35.68:0,36,460	0/0:11,0:11:27.04:0,27,358	0/0:9,0:9:21.07:0,21,293	1/1:2,10:12:33.08:402,33,0	1/1:1,14:15:42.13:528,42,0	1/1:4,15:18:45.13:568,45,0	0/0:3,0:12:24.07:0,24,324
chr10	96287995	.	A	AAG	5347.24	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=-10.779;DP=477;FS=13.889;HRun=0;HaplotypeScore=136.3967;InbreedingCoeff=0.8904;MQ=67.82;MQ0=10;MQRankSum=2.235;QD=26.60;ReadPosRankSum=2.054;VQSLOD=5.7038;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:44.47:0,44,297	0/0:9,0:8:17.70:0,18,122	0/0:57,0:26:43.05:0,43,479	0/0:52,0:19:29.10:0,29,302	0/0:24,0:24:65.07:0,65,446	1/1:3,9:16:45.01:613,45,0	1/1:6,9:16:36.10:520,36,0	0/1:32,0:32:99:141,0,152	1/1:3,12:15:36.12:580,36,0	1/1:4,13:19:47.86:668,48,0	1/1:4,8:12:21.07:336,21,0	1/1:3,11:14:33.11:533,33,0	1/1:5,11:17:36.04:512,36,0	1/1:7,5:12:21.06:300,21,0	0/0:12,0:12:29.60:0,30,205	0/0:10,0:10:29.46:0,29,193	0/0:13,0:13:31.42:0,31,201	0/0:6,0:6:8.82:0,9,60	0/0:12,0:12:27.88:0,28,187	0/0:14,0:14:32.64:0,33,223	0/0:4,0:4:2.98:0,3,21	1/1:4,7:13:35.98:479,36,0	1/1:8,4:13:20.71:283,21,0	1/1:2,5:10:23.81:292,24,0	0/0:10,0:10:29.67:0,30,204	0/0:16,0:16:41.54:0,42,286	0/0:18,0:17:47.45:0,47,323	1/1:12,0:12:17.20:90,17,0
chr10	96288028	.	A	AT	12193.92	PASS	AC=46;AF=0.852;AN=54;BaseQRankSum=6.887;DP=416;FS=4.563;HRun=2;HaplotypeScore=102.4036;InbreedingCoeff=0.9589;MQ=85.39;MQ0=0;MQRankSum=-11.526;QD=36.73;ReadPosRankSum=4.519;VQSLOD=4.9877;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:27.09:388,27,0	1/1:0,4:4:12.04:172,12,0	0/0:19,0:19:51.13:0,51,618	0/0:26,0:25:60.01:0,60,725	1/1:3,26:29:63.07:902,63,0	1/1:3,19:22:63.18:868,63,0	1/1:4,12:16:39.09:537,39,0	0/0:26,0:26:69.22:0,69,856	1/1:1,11:12:33.11:472,33,0	1/1:2,21:23:66.21:948,66,0	1/1:0,7:7:18.06:259,18,0	1/1:0,8:8:24.08:345,24,0	1/1:1,14:15:42.14:604,42,0	1/1:1,11:12:33.11:474,33,0	1/1:0,10:10:27.09:387,27,0	1/1:1,19:20:51.17:732,51,0	1/1:2,14:16:36.12:517,36,0	1/1:0,3:3:6.02:86,6,0	1/1:2,12:14:36.12:518,36,0	1/1:0,11:11:30.06:408,30,0	./.	1/1:1,11:12:33.11:474,33,0	1/1:1,15:16:42.14:604,42,0	1/1:0,10:10:27.09:388,27,0	1/1:1,12:13:33.11:472,33,0	1/1:2,19:21:60.20:862,60,0	1/1:0,20:20:54.18:776,54,0	0/0:12,0:12:30.09:0,30,372
chr10	96288064	.	GT	G	1646.48	PASS	AB=0.687;AC=23;AF=0.411;AN=56;BaseQRankSum=-3.364;DP=462;FS=14.279;HRun=14;HaplotypeScore=129.6775;InbreedingCoeff=0.5877;MQ=75.67;MQ0=1;MQRankSum=6.395;QD=7.80;ReadPosRankSum=3.388;VQSLOD=1.1187;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:32.80:0,33,205	0/0:2,0:2:5.81:0,6,35	0/0:45,1:26:22.52:0,23,270	0/1:24,1:21:28.69:29,0,56	0/0:24,0:24:36.53:0,37,210	1/1:8,11:22:13.96:216,14,0	1/1:3,15:19:34.71:230,35,0	0/1:12,16:30:16.05:219,0,16	1/1:3,8:11:14.87:103,15,0	1/1:8,6:15:25.33:157,25,0	0/1:2,4:6:12.96:67,0,13	1/1:2,2:4:5.95:41,6,0	1/1:3,8:11:26.72:184,27,0	0/1:5,9:14:1.43:118,0,1	0/0:10,0:9:14.71:0,15,93	0/0:25,0:24:49.77:0,50,315	0/0:20,0:20:24.25:0,24,142	0/0:9,0:8:15.20:0,15,98	0/0:11,0:11:11.86:0,12,80	0/0:26,0:26:60.14:0,60,350	0/0:1,0:1:0.47:0,0,1	1/1:4,8:12:14.06:101,14,0	1/1:4,9:14:7.33:166,7,0	0/1:6,6:14:30.79:90,0,31	0/0:14,0:14:32.16:0,32,192	0/0:20,0:19:56.01:0,56,364	0/0:25,0:23:42.61:0,43,264	1/1:8,4:13:19.80:126,20,0
chr10	96288502	.	AC	A	23383.66	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=7.098;DP=715;FS=5.685;HRun=2;HaplotypeScore=102.3527;InbreedingCoeff=0.9955;MQ=85.56;MQ0=0;MQRankSum=-9.284;QD=36.88;ReadPosRankSum=8.487;VQSLOD=3.6815;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,50:50:99:1908,147,0	1/1:0,7:7:18.06:234,18,0	0/0:26,0:26:78.24:0,78,1129	0/0:29,0:29:67.51:0,68,1063	1/1:0,28:28:75.24:974,75,0	1/1:0,18:18:48.16:623,48,0	1/1:0,20:20:51.17:662,51,0	0/0:20,0:20:48.15:0,48,701	1/1:0,30:30:81.26:1052,81,0	1/1:0,22:22:66.21:857,66,0	1/1:0,24:24:69.22:896,69,0	1/1:0,31:31:87.15:1129,87,0	1/1:0,24:24:72.23:934,72,0	1/1:1,24:25:72.23:935,72,0	1/1:0,33:33:99:1286,99,0	1/1:0,27:27:75.24:974,75,0	1/1:0,33:33:93.30:1208,93,0	1/1:0,22:22:63.20:818,63,0	1/1:0,18:18:51.14:636,51,0	1/1:0,26:26:75.24:974,75,0	1/1:0,28:28:81.26:1052,81,0	1/1:1,25:26:72.23:935,72,0	1/1:1,25:26:75.24:974,75,0	1/1:1,33:34:96.31:1247,96,0	1/1:0,15:15:39.13:506,39,0	1/1:0,36:36:99:1402,108,0	1/1:0,31:31:90.29:1169,90,0	0/0:6,0:6:18.03:0,18,247
chr10	96289913	.	T	TA	7694.72	PASS	AB=0.944;AC=23;AF=0.411;AN=56;BaseQRankSum=-12.829;DP=706;FS=0.983;HRun=9;HaplotypeScore=73.4472;InbreedingCoeff=0.9430;MQ=67.88;MQ0=0;MQRankSum=-0.905;QD=23.97;ReadPosRankSum=0.815;VQSLOD=5.6112;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,111,962	0/0:11,0:11:29.96:0,30,255	0/1:15,1:13:0.99:1,0,116	0/0:20,2:19:10.91:0,11,238	0/0:33,0:33:89.83:0,90,760	1/1:0,25:26:75.04:811,75,0	1/1:2,22:24:54.15:597,54,0	0/0:32,0:32:65.95:0,66,567	1/1:4,20:24:55.39:600,55,0	1/1:8,22:30:63.17:697,63,0	1/1:7,24:31:69.06:728,69,0	1/1:3,20:23:57.15:631,57,0	1/1:4,25:29:69.19:763,69,0	1/1:6,38:44:99:1196,109,0	0/0:24,0:24:62.97:0,63,547	0/0:25,0:24:26.61:0,27,392	0/0:21,0:21:56.95:0,57,490	0/0:20,0:20:56.98:0,57,493	0/0:18,0:18:41.96:0,42,361	0/0:31,0:31:86.97:0,87,752	0/0:20,1:21:23.79:0,24,432	1/1:1,9:10:24.06:266,24,0	1/1:6,25:31:66.18:727,66,0	1/1:6,25:32:63:678,63,0	0/0:10,0:10:17.98:0,18,156	0/0:37,0:37:92.97:0,93,804	0/0:35,1:36:62.77:0,63,766	0/0:3,0:3:9:0,9,78
chr10	96290765	.	TG	T	3957.43	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=3.602;DP=491;FS=1.467;HRun=2;HaplotypeScore=120.5983;InbreedingCoeff=0.6737;MQ=65.57;MQ0=2;MQRankSum=-7.038;QD=10.07;ReadPosRankSum=0.681;VQSLOD=1.6316;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,1:27:16.70:65,17,0	0/1:7,0:7:13.18:39,0,13	0/0:26,0:19:32.17:0,32,379	0/0:16,1:10:27.34:0,27,259	1/1:13,3:18:43.16:268,43,0	1/1:16,2:19:25.34:156,25,0	1/1:10,1:11:13.89:76,14,0	0/0:42,0:42:99:0,114,1016	1/1:2,0:3:5.79:38,6,0	1/1:16,3:22:29.19:324,29,0	1/1:19,6:26:55.11:445,55,0	1/1:10,1:11:2.69:8,3,0	1/1:10,1:11:18.84:106,19,0	1/1:8,0:8:4.76:23,5,0	1/1:18,1:20:38.09:202,38,0	1/1:6,2:10:3.30:90,3,0	1/1:26,0:29:6.84:185,7,0	1/1:14,1:18:17.90:146,18,0	1/1:17,1:19:52.95:371,53,0	1/1:20,2:23:51.89:297,52,0	1/1:10,0:10:25.39:142,25,0	1/1:8,1:10:18.47:109,18,0	1/1:16,5:21:13.40:189,13,0	0/1:9,0:7:0.40:22,0,0	1/1:15,2:19:28.34:173,28,0	1/1:18,1:19:53.53:345,54,0	1/1:13,2:15:29.54:140,30,0	0/0:13,0:13:39.02:0,39,354
chr10	96290766	.	G	GTTT	6731.11	PASS	AB=0.829;AC=41;AF=0.732;AN=56;BaseQRankSum=2.716;DP=490;FS=5.608;HRun=6;HaplotypeScore=126.5654;InbreedingCoeff=0.3226;MQ=65.49;MQ0=2;MQRankSum=-6.337;QD=17.17;ReadPosRankSum=2.500;VQSLOD=1.2019;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:26:17.81:223,18,0	1/1:7,0:7:8.87:101,9,0	0/0:26,0:19:40.37:0,40,547	0/0:18,0:11:26.59:0,27,371	1/1:12,3:18:36.79:504,37,0	1/1:14,0:20:0.55:278,1,0	1/1:2,0:11:10.36:182,10,0	0/0:41,0:41:99:0,109,1381	1/1:4,0:3:1.30:6,1,0	0/1:23,0:22:9.63:161,0,10	0/1:21,1:26:10.94:270,0,11	1/1:3,0:11:3.01:40,3,0	1/1:9,0:12:13.02:155,13,0	0/1:1,0:8:3.09:32,0,3	1/1:4,13:19:35.47:640,35,0	0/1:9,0:10:30.61:46,0,31	0/1:27,0:29:45.04:191,0,45	0/1:8,1:18:6.68:89,0,7	1/1:16,3:19:39.99:465,40,0	1/1:13,9:22:53.02:814,53,0	1/1:5,5:10:13.15:174,13,0	1/1:2,0:10:5.34:126,5,0	1/1:17,0:21:26.57:289,27,0	0/1:9,0:7:6.41:11,0,6	1/1:11,8:19:37.64:550,38,0	1/1:4,13:19:45.13:723,45,0	1/1:6,9:15:42.68:661,43,0	0/0:13,0:13:39.12:0,39,480
chr10	96290767	.	G	GT	3407.61	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=0.681;DP=501;FS=14.154;HRun=9;HaplotypeScore=132.1317;InbreedingCoeff=0.3660;MQ=64.57;MQ0=2;MQRankSum=-2.980;QD=7.47;ReadPosRankSum=2.834;VQSLOD=0.6366;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:15.18:73,15,0	1/1:3,0:8:8.58:45,9,0	0/0:26,0:19:20.68:0,21,176	0/0:18,0:11:20.90:0,21,166	1/1:22,0:22:22.85:123,23,0	1/1:21,0:21:12.34:114,12,0	1/1:11,0:11:16.48:82,16,0	1/1:10,29:41:37.73:831,38,0	1/1:4,0:3:2.22:7,2,0	1/1:24,0:23:0.21:99,0,0	1/1:27,0:26:14.04:148,14,0	1/1:12,0:11:4.12:18,4,0	1/1:12,0:12:15.51:80,16,0	1/1:5,0:5:3.73:17,4,0	1/1:21,0:21:31.95:169,32,0	0/1:10,0:10:4.23:4,0,21	0/1:31,0:30:43.77:60,0,44	0/1:18,0:17:7.23:47,0,7	1/1:23,0:21:17.16:82,17,0	1/1:24,0:24:39.48:218,39,0	1/1:10,0:10:11.62:68,12,0	1/1:9,0:9:12:61,12,0	1/1:20,0:21:24.77:153,25,0	0/1:9,0:7:10.55:12,0,11	1/1:19,0:19:29.45:139,29,0	1/1:20,0:20:32.76:180,33,0	1/1:16,0:16:29.85:148,30,0	1/1:0,13:13:39.11:431,39,0
chr10	96291027	.	A	AGT	5422.57	PASS	AB=0.928;AC=26;AF=0.464;AN=56;BaseQRankSum=-6.355;DP=643;FS=45.809;HRun=0;HaplotypeScore=121.2593;InbreedingCoeff=0.5431;MQ=63.67;MQ0=9;MQRankSum=-0.499;QD=16.43;ReadPosRankSum=2.473;VQSLOD=2.8103;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:42:0,42,497	0/1:4,0:4:5.64:6,0,27	0/0:38,0:26:13.77:0,14,191	0/0:35,0:20:17.95:0,18,404	0/0:14,0:14:12.02:0,12,131	1/1:6,11:17:17.79:255,18,0	1/1:10,13:24:12.84:341,13,0	0/0:34,0:34:69.20:0,69,825	1/1:7,23:31:51.17:823,51,0	1/1:7,17:23:48.16:741,48,0	1/1:5,8:13:12.04:178,12,0	1/1:8,10:19:29.20:484,29,0	1/1:6,15:22:24.07:365,24,0	1/1:6,21:26:47.95:741,48,0	0/1:26,0:26:4.52:5,0,132	0/0:24,0:23:31.94:0,32,217	0/0:28,0:28:17.48:0,17,232	0/0:15,0:14:26.30:0,26,151	0/0:17,0:17:19.49:0,19,313	0/0:14,0:13:0.31:0,0,69	0/0:40,0:39:27.75:0,28,317	1/1:3,5:8:9.03:145,9,0	0/1:9,12:21:15.74:217,0,16	1/1:6,30:36:56.50:945,57,0	0/1:10,0:10:20.54:21,0,97	0/1:28,2:26:99:121,0,405	0/1:17,0:17:34.07:34,0,149	0/0:10,0:10:27.08:0,27,329
chr10	96291044	.	C	CTGTG	4644.98	PASS	AB=0.971;AC=27;AF=0.482;AN=56;BaseQRankSum=-1.644;DP=662;FS=0.501;HRun=0;HaplotypeScore=141.9790;InbreedingCoeff=0.6988;MQ=58.71;MQ0=18;MQRankSum=-2.794;QD=12.83;ReadPosRankSum=1.115;VQSLOD=4.3229;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,25:45:47.61:1012,48,0	1/1:2,0:5:6.02:105,6,0	0/0:45,0:22:11.90:0,12,218	0/1:50,0:28:27.44:27,0,373	1/1:7,0:15:0.44:1,0,0	0/0:15,0:15:23.93:0,24,230	0/0:19,0:19:29.91:0,30,278	0/0:36,0:36:48:0,48,963	0/0:30,0:30:46.69:0,47,430	0/0:24,0:22:38.97:0,39,413	0/0:14,0:14:20.94:0,21,186	0/0:14,0:14:38.65:0,39,315	0/1:20,0:20:12.58:13,0,195	0/0:23,0:22:42.52:0,43,308	1/1:15,0:30:15.05:262,15,0	1/1:7,12:18:24.08:593,24,0	1/1:8,17:26:44.37:982,44,0	1/1:4,11:16:32.54:631,33,0	1/1:10,0:20:14.17:177,14,0	1/1:8,0:12:12.01:153,12,0	1/1:41,0:40:9.89:132,10,0	0/0:7,0:7:14.97:0,15,159	0/0:22,0:21:32.66:0,33,341	0/0:38,0:38:48.27:0,48,589	1/1:7,0:7:2.48:32,2,0	0/1:28,0:27:32.82:161,0,33	1/1:7,0:20:21.07:365,21,0	0/0:12,0:12:33.11:0,33,525
chr10	96291504	.	TCTTTA	T	721.18	PASS	AB=0.760;AC=9;AF=0.173;AN=52;BaseQRankSum=2.045;DP=242;FS=12.772;HRun=0;HaplotypeScore=67.0973;InbreedingCoeff=0.1054;MQ=49.49;MQ0=4;MQRankSum=-4.797;QD=11.82;ReadPosRankSum=1.017;VQSLOD=0.8348;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:36.12:0,36,739	1/1:1,1:2:3.01:70,3,0	0/0:5,0:2:6.02:0,6,151	0/0:8,0:3:6.02:0,6,151	0/0:4,0:4:6.02:0,6,180	0/0:16,0:16:45.15:0,45,1423	0/0:7,0:7:21.07:0,21,689	0/0:40,0:35:99:0,105,3429	0/0:3,0:3:9.03:0,9,300	0/0:10,0:10:30.10:0,30,947	0/0:11,0:11:33.11:0,33,990	0/0:3,0:3:9.03:0,9,289	0/0:2,0:2:6.02:0,6,157	0/0:6,0:6:18.06:0,18,454	./.	0/0:4,0:4:9.03:0,9,203	0/0:31,0:31:83.48:0,83,2102	0/1:25,1:25:0.57:1,0,1630	0/1:8,5:13:99:266,0,510	1/1:0,1:1:3.01:70,3,0	0/0:1,0:1:3.01:0,3,95	0/0:2,0:2:6.02:0,6,200	./.	0/0:2,0:2:6.02:0,6,194	0/1:3,5:8:99:257,0,278	0/1:3,1:4:56.53:57,0,288	0/1:4,3:5:99:126,0,187	0/0:11,0:11:33.11:0,33,1057
chr10	96291509	.	A	AAAAT	2376.45	PASS	AC=16;AF=0.320;AN=50;BaseQRankSum=-2.510;DP=238;FS=6.945;HRun=0;HaplotypeScore=61.2270;InbreedingCoeff=0.5776;MQ=52.45;MQ0=2;MQRankSum=-1.326;QD=25.55;ReadPosRankSum=0.798;VQSLOD=2.6286;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:0,0:15:33.04:0,33,307	1/1:2,0:2:0.88:2,1,0	0/0:6,0:3:3:0,3,49	0/0:7,0:3:3.01:0,3,49	./.	0/0:16,0:16:30.10:0,30,491	0/0:7,0:7:18.06:0,18,295	0/0:36,0:34:63.21:0,63,1007	0/0:3,0:3:6:0,6,72	0/0:9,0:9:18.06:0,18,295	0/0:10,0:10:18.06:0,18,294	0/0:3,0:3:6.02:0,6,98	0/0:2,0:2:3.01:0,3,49	0/0:4,0:4:6.02:0,6,98	./.	0/0:1,0:4:6.01:0,6,56	1/1:11,20:31:54.19:1317,54,0	1/1:9,18:26:47.65:1085,48,0	1/1:12,0:12:4.88:31,5,0	1/1:2,0:2:3.48:56,3,0	1/1:4,0:4:2.75:23,3,0	0/0:2,0:2:3.01:0,3,49	./.	0/0:2,0:2:6.02:0,6,98	1/1:9,0:9:1.89:4,2,0	0/0:4,0:4:5.90:0,6,98	1/1:6,0:5:0.47:1,0,0	0/0:12,0:12:27.09:0,27,437
chr10	96291650	.	TA	T	2685.13	PASS	AB=0.857;AC=21;AF=0.389;AN=54;BaseQRankSum=5.152;DP=315;FS=36.700;HRun=5;HaplotypeScore=55.5590;InbreedingCoeff=0.8565;MQ=64.19;MQ0=0;MQRankSum=0.197;QD=26.07;ReadPosRankSum=0.972;VQSLOD=1.3115;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:39.13:0,39,525	0/0:3,0:3:9.03:0,9,123	0/0:4,0:3:6.02:0,6,82	0/0:7,0:7:10.26:0,10,96	0/0:8,0:8:21.07:0,21,287	1/1:0,16:16:48.14:544,48,0	1/1:0,12:12:30.08:338,30,0	0/0:38,0:38:99:0,99,1333	1/1:0,7:7:21.06:238,21,0	1/1:2,12:14:36.09:397,36,0	1/1:0,16:16:45.13:508,45,0	1/1:1,10:11:21.06:238,21,0	1/1:0,4:4:9.03:102,9,0	1/1:0,5:5:15.04:170,15,0	0/0:5,0:5:15.05:0,15,204	0/0:5,0:5:12.04:0,12,164	0/0:35,0:35:99:0,99,1335	0/0:25,0:25:69.16:0,69,896	0/0:17,0:17:48.16:0,48,649	0/0:4,0:4:12.04:0,12,164	0/0:10,0:10:27.05:0,27,348	./.	1/1:1,7:8:21.06:238,21,0	1/1:0,4:4:9.02:102,9,0	0/0:18,0:18:51.17:0,51,692	0/1:5,1:6:18.98:19,0,149	0/0:13,0:13:39.13:0,39,531	0/0:5,0:5:15.05:0,15,205
chr10	96291807	.	A	ATGTCGAG	33012.10	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-2.596;DP=472;FS=21.579;HRun=0;HaplotypeScore=125.5743;InbreedingCoeff=0.9694;MQ=82.74;MQ0=0;MQRankSum=-12.621;QD=82.74;ReadPosRankSum=6.303;VQSLOD=3.6027;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,22:30:57.19:2364,57,0	1/1:0,9:10:24.08:1003,24,0	0/0:23,0:23:63.15:0,63,1598	0/0:18,0:18:45.12:0,45,1098	1/1:3,10:16:23.87:1000,24,0	1/1:4,0:20:48.16:1716,48,0	1/1:7,0:23:57.20:1916,57,0	0/0:27,0:27:72.24:0,72,1913	1/1:6,0:17:36.12:1222,36,0	1/1:6,0:21:63.21:2010,63,0	1/1:3,0:12:15.05:535,15,0	1/1:3,0:22:44.99:1591,45,0	1/1:3,0:14:12.11:1061,12,0	1/1:5,0:13:30.10:1036,30,0	1/1:6,12:19:36.12:1503,36,0	1/1:2,7:10:24.08:1001,24,0	1/1:5,14:23:42.14:1754,42,0	1/1:4,10:15:36.12:1506,36,0	1/1:6,8:17:51.18:1932,51,0	1/1:3,5:10:21.07:875,21,0	1/1:5,6:14:19.31:754,19,0	1/1:2,0:14:36.12:1269,36,0	1/1:4,0:11:12.04:422,12,0	1/1:5,0:15:27.09:961,27,0	1/1:5,8:14:33.11:1378,33,0	1/1:7,14:24:72.20:2584,72,0	1/1:5,8:15:39.13:1617,39,0	0/0:5,0:5:15.05:0,15,419
chr10	96292436	.	AACACACAC	A	3989.05	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=6.086;DP=531;FS=123.640;HRun=0;HaplotypeScore=165.9221;InbreedingCoeff=0.8579;MQ=53.39;MQ0=5;MQRankSum=-5.537;QD=30.22;ReadPosRankSum=1.569;VQSLOD=0.5084;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:6.02:0,6,193	0/0:11,0:11:12.04:0,12,400	0/0:32,0:22:18.95:0,19,687	0/0:42,0:28:33.46:0,33,1149	0/0:18,0:19:6.76:0,7,143	1/1:8,6:14:18.06:458,18,0	1/1:11,2:13:7.13:154,7,0	0/0:29,0:29:57.20:0,57,2160	1/1:1,8:9:24.08:598,24,0	1/1:2,7:11:27.09:627,27,0	1/1:5,12:17:26.75:286,27,0	1/1:2,3:5:9.03:195,9,0	1/1:1,10:11:26.63:508,27,0	1/1:5,2:7:5.99:96,6,0	0/0:23,0:28:15.24:0,15,377	0/0:16,0:16:15.05:0,15,502	0/0:22,0:29:16.52:0,17,522	0/0:14,0:18:21.07:0,21,714	0/0:18,0:17:37.67:0,38,1265	0/0:18,0:23:7.17:0,7,140	0/0:28,0:34:4.48:0,4,119	1/1:7,6:13:12.04:302,12,0	1/1:4,9:13:27.34:457,27,0	1/1:13,6:19:13.08:309,13,0	0/0:18,0:23:5.20:0,5,93	0/0:23,0:22:48.16:0,48,1705	0/0:15,0:15:21:0,21,599	0/0:7,0:7:9.03:0,9,334
chr10	96292798	.	T	TC	1160.41	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.912;DP=722;FS=1.421;HRun=4;HaplotypeScore=72.4184;InbreedingCoeff=0.8984;MQ=78.25;MQ0=0;MQRankSum=-0.964;QD=33.15;ReadPosRankSum=-3.800;VQSLOD=2.5079;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,126,1424	0/0:10,0:10:18.05:0,18,204	0/0:34,0:31:76:0,76,847	0/0:26,0:25:69.08:0,69,747	0/0:29,0:29:78.22:0,78,883	0/0:15,0:15:39.11:0,39,442	0/0:26,0:26:66.19:0,66,748	1/1:2,30:32:90.30:1228,90,0	0/0:26,0:26:78.19:0,78,865	0/0:27,0:27:78.22:0,78,885	0/0:15,0:15:39.11:0,39,440	0/0:27,0:27:75.21:0,75,851	0/0:25,0:25:69.20:0,69,783	0/0:32,0:32:96.24:0,96,1069	0/0:36,0:36:99:0,99,1113	0/0:37,0:37:99:0,108,1225	0/0:14,0:14:36.10:0,36,408	0/0:19,0:19:51.14:0,51,578	0/0:23,0:23:51.12:0,51,563	0/0:26,0:26:69.20:0,69,781	0/0:41,0:41:99:0,108,1195	0/0:13,0:13:36.09:0,36,399	0/0:22,0:22:60.17:0,60,678	0/0:30,0:30:87.22:0,87,974	0/0:20,0:20:54.09:0,54,581	0/0:32,0:32:87.25:0,87,986	0/0:34,0:34:99:0,99,1123	1/1:2,1:3:3.01:41,3,0
chr10	96293527	.	GCACATATA	G	1949.01	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=6.763;DP=319;FS=9.200;HRun=0;HaplotypeScore=88.8903;InbreedingCoeff=0.1766;MQ=60.34;MQ0=15;MQRankSum=-2.565;QD=14.23;ReadPosRankSum=4.342;VQSLOD=1.1053;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,15:20:5.99:0,6,49	0/0:7,0:6:8.62:0,9,222	0/0:20,0:4:6.02:0,6,128	0/0:21,0:9:1.40:0,1,51	0/0:13,0:12:24.06:0,24,550	0/1:13,0:12:9.98:186,0,10	0/1:4,0:4:15.95:74,0,16	0/1:15,0:15:99:298,0,139	0/1:11,0:11:36.32:70,0,36	1/1:12,1:11:12.21:164,12,0	0/1:14,0:12:49.43:122,0,49	1/1:9,0:9:2.66:46,3,0	0/1:9,0:9:7.03:159,0,7	1/1:10,0:9:15.05:215,15,0	0/0:10,0:9:18.05:0,18,467	0/1:5,0:5:14.97:43,0,15	0/1:11,0:11:0.45:139,0,0	0/1:9,0:9:2.94:197,0,3	0/0:15,0:14:42.08:0,42,998	0/0:13,0:13:26.93:0,27,541	0/0:11,0:8:3.01:0,3,100	0/0:4,0:4:0:0,0,0	0/0:7,0:6:0:0,0,0	1/1:3,0:3:3.01:46,3,0	0/0:15,0:15:24.05:0,24,548	0/0:16,0:16:0.16:0,0,1089	0/0:9,0:9:11.22:0,11,453	1/1:11,0:11:27.03:351,27,0
chr10	96293528	.	CACATATAT	C	3520.28	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=2.005;DP=313;FS=2.295;HRun=0;HaplotypeScore=82.9154;InbreedingCoeff=0.5789;MQ=58.81;MQ0=15;MQRankSum=-3.383;QD=20.71;ReadPosRankSum=1.004;VQSLOD=2.6340;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:3:25,3,0	0/0:7,0:6:5.58:0,6,147	0/0:17,0:3:6.02:0,6,116	0/0:21,0:9:5.23:0,5,62	0/0:12,0:11:20.27:0,20,352	1/1:13,0:12:11.99:285,12,0	1/1:4,0:4:6.02:127,6,0	1/1:6,8:14:24.08:502,24,0	1/1:10,0:10:8.51:149,9,0	1/1:3,10:11:16.57:286,17,0	0/1:13,0:11:20.45:225,0,20	1/1:9,0:9:3.12:55,3,0	1/1:9,0:9:14.96:251,15,0	1/1:10,0:9:15.99:328,16,0	0/0:10,0:9:15.05:0,15,317	1/1:5,0:5:3.01:73,3,0	1/1:11,0:11:13.87:251,14,0	1/1:9,0:9:21:354,21,0	0/0:15,0:14:34.27:0,34,635	0/0:14,0:14:18.30:0,18,318	0/0:11,0:8:3.01:0,3,75	0/0:0,4:4:0:0,0,0	0/0:1,6:6:0:0,0,0	1/1:3,0:3:3.01:71,3,0	0/0:15,0:15:18.04:0,18,353	0/1:16,0:16:15.13:15,0,721	0/0:9,0:9:4.23:0,4,318	1/1:11,0:11:27.09:523,27,0
chr10	96293532	.	TATATACATACACACAC	T	3739.96	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=1.298;DP=303;FS=4.274;HRun=0;HaplotypeScore=101.5370;InbreedingCoeff=0.6121;MQ=56.22;MQ0=22;MQRankSum=-2.351;QD=22.39;ReadPosRankSum=0.430;VQSLOD=1.4067;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:17:3:25,3,0	0/0:7,0:6:8.29:0,8,201	0/0:16,0:3:6.02:0,6,116	0/0:20,0:7:5.21:0,5,32	0/0:12,0:11:21.06:0,21,522	1/1:13,0:12:12:285,12,0	1/1:2,0:3:6.02:127,6,0	1/1:8,0:8:24.08:502,24,0	1/1:10,0:10:8.54:149,9,0	1/1:13,0:11:16.90:287,17,0	0/1:12,0:10:88.62:225,0,89	1/1:8,0:9:3.02:55,3,0	1/1:10,0:9:14.55:251,15,0	1/1:11,0:9:15.99:331,16,0	0/0:9,0:8:15.05:0,15,317	1/1:3,0:4:3.01:73,3,0	1/1:10,1:14:15.36:332,15,0	1/1:7,1:9:21:472,21,0	0/0:14,0:13:36.12:0,36,817	0/0:12,0:12:20.77:0,21,459	0/0:11,0:8:3.01:0,3,75	0/0:4,0:4:0:0,0,0	0/0:7,0:6:0:0,0,0	1/1:5,0:3:3.01:71,3,0	0/0:14,0:14:18.51:0,19,354	0/1:16,0:16:8.84:9,0,870	0/0:10,0:9:23.78:0,24,517	1/1:9,2:11:18.36:546,18,0
chr10	96293540	.	TACACACAC	T	1155	PASS	AB=1.000;AC=19;AF=0.528;AN=36;BaseQRankSum=-1.812;DP=297;FS=12.478;HRun=0;HaplotypeScore=83.2022;InbreedingCoeff=0.3448;MQ=52.75;MQ0=33;MQRankSum=1.670;QD=10.22;ReadPosRankSum=1.883;VQSLOD=1.0042;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:5,2:6:3.01:74,3,0	./.	./.	1/1:10,1:10:6.02:103,6,0	./.	./.	0/0:9,0:9:1.55:0,2,4	0/0:8,0:8:0:0,0,0	0/0:13,0:11:0:0,0,0	0/0:11,0:9:3.01:0,3,73	0/0:9,0:9:0:0,0,0	0/0:10,0:7:0.47:0,0,1	1/1:11,0:9:0.47:1,0,0	0/0:6,4:9:0.47:0,0,1	./.	1/1:14,0:14:4.74:34,5,0	1/1:8,0:7:6:79,6,0	1/1:16,0:14:12.04:268,12,0	1/1:7,2:10:5.85:123,6,0	./.	./.	./.	./.	0/0:13,0:13:0:0,0,0	1/1:12,1:13:12.04:280,12,0	1/1:11,1:10:11.87:264,12,0	0/1:11,0:10:13.68:23,0,14
chr10	96293584	.	CACACACACATATATATATATATATATATATATATATATAT	C	3716.99	PASS	AB=1.000;AC=21;AF=0.618;AN=34;BaseQRankSum=1.589;DP=271;FS=7.459;HRun=0;HaplotypeScore=144.8070;InbreedingCoeff=0.3129;MQ=32.00;MQ0=45;MQRankSum=2.142;QD=28.81;ReadPosRankSum=3.642;VQSLOD=2.1134;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:5,0:4:7.27:321,7,0	./.	./.	1/1:9,0:7:6.02:103,6,0	./.	0/0:8,0:7:0.47:0,0,1	0/0:19,0:18:6.67:0,7,32	1/1:10,0:10:3.01:234,3,0	0/1:14,0:12:24.80:221,0,25	0/0:7,0:6:3.01:0,3,73	0/0:6,0:6:0.47:0,0,1	./.	./.	./.	./.	1/1:15,0:12:13.21:516,13,0	1/1:12,0:10:12.03:418,12,0	1/1:9,0:7:2.50:462,3,0	1/1:10,0:10:9.03:367,9,0	./.	./.	./.	0/1:15,0:11:0:0,0,0	0/0:6,11:14:0.47:0,0,1	1/1:13,0:12:13.30:542,13,0	1/1:11,0:8:14.98:283,15,0	0/1:6,0:5:10.67:251,0,11
chr10	96293592	.	CATATATATATATATATATATATATATATATATATATAT	C	2898.74	PASS	AB=0.777;AC=17;AF=0.531;AN=32;BaseQRankSum=0.802;DP=268;FS=14.356;HRun=0;HaplotypeScore=139.2797;InbreedingCoeff=0.1750;MQ=35.19;MQ0=31;MQRankSum=-1.764;QD=23.38;ReadPosRankSum=3.331;VQSLOD=1.6166;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:13:3:0,3,28	0/1:3,0:4:9.99:187,0,10	./.	./.	0/0:6,0:5:4.97:0,5,18	./.	./.	1/1:18,0:17:25.45:170,25,0	1/1:4,8:12:3.01:285,3,0	1/1:6,7:13:6.19:363,6,0	./.	0/0:4,3:7:0.47:0,0,1	./.	./.	./.	./.	1/1:13,1:12:8.17:593,8,0	1/1:5,8:11:11.02:510,11,0	0/1:6,0:6:99:155,0,112	0/1:5,0:9:14.32:184,0,14	./.	./.	./.	0/1:5,11:13:0:0,0,0	0/0:16,0:14:0.47:0,0,1	0/1:11,1:11:99:266,0,159	0/0:9,0:9:16.14:0,16,153	1/1:4,1:5:5.69:300,6,0
chr10	96294004	.	TCA	T	3881.58	PASS	AC=44;AF=0.815;AN=54;BaseQRankSum=0.533;DP=353;FS=6.575;HRun=0;HaplotypeScore=100.0114;InbreedingCoeff=0.8279;MQ=61.22;MQ0=6;MQRankSum=-1.863;QD=14.48;ReadPosRankSum=4.095;VQSLOD=3.1234;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:17:14.75:119,15,0	1/1:8,0:8:23.97:202,24,0	0/0:12,0:9:27.08:0,27,428	0/0:28,0:17:8.30:0,8,444	1/1:10,0:10:20.95:170,21,0	1/1:18,0:18:41.76:321,42,0	1/1:17,0:17:35.86:290,36,0	0/0:21,0:21:59.89:0,60,540	1/1:11,0:11:23.95:197,24,0	1/1:15,0:15:7.08:255,7,0	1/1:3,0:3:5.99:50,6,0	1/1:5,0:5:9.40:67,9,0	1/1:8,0:8:17.70:122,18,0	1/1:6,0:5:6.46:49,6,0	1/1:15,1:14:24.39:198,24,0	1/1:12,0:12:26.93:220,27,0	1/1:16,0:15:18.33:136,18,0	1/1:8,0:8:11.94:91,12,0	1/1:8,0:8:23.95:201,24,0	1/1:9,0:8:14.99:138,15,0	1/1:22,0:21:32.90:261,33,0	0/0:0,8:8:0:0,0,0	./.	1/1:19,0:18:20.42:175,20,0	1/1:6,0:6:11.94:93,12,0	1/1:17,0:16:39.78:325,40,0	1/1:15,0:15:29.11:203,29,0	0/0:9,0:9:27.02:0,27,324
chr10	96294015	.	CTTTCTCTT	C	6071.63	PASS	AB=0.964;AC=49;AF=0.942;AN=52;BaseQRankSum=3.164;DP=323;FS=2.784;HRun=0;HaplotypeScore=95.7288;InbreedingCoeff=0.4173;MQ=56.17;MQ0=42;MQRankSum=-2.530;QD=20.31;ReadPosRankSum=0.041;VQSLOD=4.1859;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:13:8.61:145,9,0	1/1:8,0:7:21.05:309,21,0	0/0:11,0:8:23.79:0,24,378	0/1:26,0:16:14.29:14,0,365	1/1:7,0:7:12.02:166,12,0	1/1:19,0:17:39.11:559,39,0	1/1:14,0:12:24.03:295,24,0	1/1:2,15:16:45.10:619,45,0	1/1:11,0:10:20.71:345,21,0	1/1:12,0:8:19.88:292,20,0	1/1:2,0:2:6.02:100,6,0	1/1:3,0:3:9.03:136,9,0	1/1:4,0:3:6.02:71,6,0	1/1:6,0:5:6.02:98,6,0	1/1:14,0:12:21.06:309,21,0	1/1:10,0:9:21.07:347,21,0	1/1:17,0:13:18.01:245,18,0	1/1:12,0:6:8.99:111,9,0	1/1:5,0:4:12.03:174,12,0	1/1:7,0:6:12.03:167,12,0	1/1:20,0:14:18.01:237,18,0	./.	./.	1/1:24,0:17:17.61:272,18,0	1/1:6,0:5:9.03:130,9,0	1/1:14,0:10:30.05:436,30,0	1/1:15,0:14:33.02:407,33,0	1/1:9,0:8:11.94:90,12,0
chr10	96295069	.	CA	C	3541.80	PASS	AB=0.838;AC=23;AF=0.411;AN=56;BaseQRankSum=-13.473;DP=561;FS=18.110;HRun=12;HaplotypeScore=148.8856;InbreedingCoeff=0.8152;MQ=66.08;MQ0=3;MQRankSum=-1.355;QD=14.34;ReadPosRankSum=-1.791;VQSLOD=2.0190;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:43.27:0,43,235	0/0:10,0:10:20.93:0,21,94	0/1:20,0:13:10.94:18,0,11	0/0:18,0:14:17.69:0,18,156	0/0:25,0:26:46.65:0,47,215	1/1:3,16:19:49.17:373,49,0	1/1:5,8:13:27.76:208,28,0	0/0:21,0:22:24.33:0,24,141	1/1:3,19:22:44.82:347,45,0	1/1:7,22:29:54.89:511,55,0	1/1:3,16:20:47.31:356,47,0	1/1:4,13:17:38.83:299,39,0	1/1:5,12:17:41.83:323,42,0	1/1:2,11:13:23.46:242,23,0	0/0:19,0:19:48.21:0,48,199	0/0:24,0:24:54.82:0,55,295	0/0:20,0:20:36.80:0,37,168	0/0:24,0:24:44.73:0,45,190	0/0:23,0:21:42.61:0,43,201	0/0:24,0:24:30.13:0,30,154	0/0:17,0:17:32.14:0,32,132	0/1:3,13:16:1.66:235,0,2	1/1:3,16:19:44.74:341,45,0	1/1:4,12:16:20.11:274,20,0	0/0:24,0:24:49.87:0,50,222	0/1:24,1:25:14.31:14,0,111	0/0:27,0:26:47.35:0,47,213	0/0:15,0:15:28.44:0,28,141
chr10	96295072	.	A	AC	7901.46	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-14.787;DP=572;FS=10.744;HRun=0;HaplotypeScore=139.8487;InbreedingCoeff=0.9992;MQ=65.89;MQ0=3;MQRankSum=4.053;QD=31.86;ReadPosRankSum=2.274;VQSLOD=3.4449;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:51.15:0,51,269	1/1:1,11:12:30.07:391,30,0	0/0:21,0:13:26.86:0,27,232	0/0:15,0:12:31.53:0,32,308	1/1:2,25:27:70.50:849,70,0	0/0:19,0:19:51.85:0,52,400	0/0:14,0:14:38.71:0,39,309	0/0:23,0:23:58.04:0,58,318	0/0:22,0:22:49.88:0,50,376	0/0:28,1:29:46.01:0,46,597	0/0:21,0:21:59.21:0,59,447	0/0:18,0:18:44.82:0,45,342	0/0:16,0:16:47.53:0,48,347	0/0:13,0:13:37.46:0,37,271	1/1:0,19:19:54.18:716,54,0	0/0:25,0:25:60.19:0,60,372	1/1:0,19:19:54.17:701,54,0	1/1:0,25:25:57.19:748,57,0	1/1:2,21:22:58.28:701,58,0	1/1:1,24:25:66.02:800,66,0	1/1:0,18:18:36.12:478,36,0	0/0:17,0:17:46.72:0,47,346	0/0:20,0:20:58.65:0,59,437	0/0:16,0:16:42.42:0,42,319	1/1:0,25:25:69.22:903,69,0	1/1:3,23:26:22.14:776,22,0	1/1:2,26:28:66.06:837,66,0	0/0:15,0:15:34.56:0,35,199
chr10	96295081	.	A	AC	5421.50	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-9.556;DP=590;FS=1.023;HRun=2;HaplotypeScore=154.6614;InbreedingCoeff=0.9098;MQ=72.03;MQ0=3;MQRankSum=-4.305;QD=16.63;ReadPosRankSum=-0.370;VQSLOD=4.7326;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:45.04:551,45,0	0/0:13,0:13:34.06:0,34,145	0/0:23,0:16:7.76:0,8,134	0/0:16,0:14:29.81:0,30,241	0/0:28,0:28:44.62:0,45,256	1/1:21,0:21:58.52:340,59,0	1/1:13,0:13:37.23:234,37,0	1/1:4,0:28:68.62:538,69,0	1/1:22,0:22:50.41:339,50,0	1/1:32,0:32:71.56:482,72,0	1/1:21,0:21:53.70:322,54,0	1/1:19,0:19:52.80:339,53,0	1/1:17,0:17:49.53:308,50,0	1/1:15,0:15:41.66:243,42,0	0/0:21,0:21:47.77:0,48,193	1/1:2,22:24:51.04:652,51,0	0/0:18,0:18:35.18:0,35,140	0/0:25,0:25:29.95:0,30,159	0/0:23,0:22:1.39:0,1,172	0/0:23,0:23:50.48:0,50,215	0/0:18,0:18:41.38:0,41,173	1/1:20,0:20:36:253,36,0	1/1:20,0:20:52.95:309,53,0	1/1:15,0:15:42.29:259,42,0	0/0:29,0:29:71.24:0,71,296	0/1:26,0:26:3.20:3,0,201	0/0:26,0:26:37.57:0,38,180	1/1:0,1:13:29.93:250,30,0
chr10	96296121	.	TC	T	1921.68	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=8.903;DP=657;FS=1.731;HRun=3;HaplotypeScore=56.3007;InbreedingCoeff=0.9334;MQ=54.03;MQ0=39;MQRankSum=1.504;QD=28.26;ReadPosRankSum=0.081;VQSLOD=2.6820;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,36:38:93.29:1153,93,0	0/0:12,0:12:36.08:0,36,477	./.	0/0:25,0:5:15.05:0,15,203	0/0:25,0:24:63.19:0,63,887	0/0:14,0:13:39.13:0,39,562	0/0:26,0:25:72.23:0,72,1005	0/0:31,0:27:75.25:0,75,1060	0/0:27,0:23:69.23:0,69,994	0/0:27,0:25:72.24:0,72,1021	0/0:11,0:7:21.06:0,21,285	0/0:30,0:28:72.24:0,72,1037	0/0:23,0:19:57.19:0,57,816	0/0:11,0:10:30.10:0,30,431	0/0:24,0:21:57.16:0,57,768	1/1:3,24:26:72.23:890,72,0	0/0:30,0:30:90.30:0,90,1296	0/0:27,0:25:60.20:0,60,863	0/0:21,0:17:48.16:0,48,689	0/0:22,0:22:57.18:0,57,803	0/0:34,0:33:96.31:0,96,1363	0/0:22,0:22:63.21:0,63,904	0/0:21,0:19:51.16:0,51,716	0/0:31,0:30:87.28:0,87,1235	0/0:18,1:18:5.54:0,6,525	0/0:22,0:21:57.15:0,57,798	0/0:25,0:24:72.19:0,72,992	0/0:8,0:8:24.08:0,24,346
chr10	96296627	.	TA	T	11649.80	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-9.512;DP=581;FS=0.403;HRun=7;HaplotypeScore=67.5418;InbreedingCoeff=0.9973;MQ=71.48;MQ0=0;MQRankSum=-0.464;QD=25.89;ReadPosRankSum=5.051;VQSLOD=5.2089;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:75.24:0,75,943	1/1:1,12:13:33.07:337,33,0	0/0:20,0:18:40.54:0,41,465	0/0:15,0:15:18:0,18,201	1/1:1,23:24:66.15:673,66,0	1/1:2,19:21:48.11:490,48,0	1/1:3,17:20:45.10:459,45,0	0/0:4,0:29:68.54:0,69,347	1/1:3,22:25:66.15:673,66,0	1/1:3,19:21:57.10:572,57,0	1/1:1,23:24:66.15:673,66,0	1/1:0,14:14:42.10:427,42,0	1/1:1,16:17:48.11:490,48,0	1/1:2,15:17:42.10:428,42,0	1/1:3,18:21:48.10:490,48,0	0/0:17,1:18:20.55:0,21,573	1/1:1,14:15:42.10:429,42,0	1/1:3,19:22:37.72:532,38,0	1/1:3,13:15:39.05:383,39,0	1/1:2,27:29:78.17:795,78,0	1/1:1,17:18:42.10:429,42,0	1/1:2,15:17:42.09:427,42,0	1/1:2,20:22:54.12:551,54,0	1/1:3,13:16:39.09:398,39,0	1/1:1,26:27:69.16:704,69,0	1/1:4,28:32:84.10:831,84,0	1/1:0,18:18:45.10:459,45,0	0/0:3,0:19:45.76:0,46,251
chr10	96297036	.	A	AGT	1164.42	PASS	AB=0.604;AC=15;AF=0.268;AN=56;BaseQRankSum=1.822;DP=414;FS=7.139;HRun=0;HaplotypeScore=76.8310;InbreedingCoeff=0.2175;MQ=71.23;MQ0=1;MQRankSum=0.085;QD=8.14;ReadPosRankSum=1.095;VQSLOD=2.0147;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1623	0/0:3,0:4:7.89:0,8,66	0/0:11,0:8:15.45:0,15,155	0/1:9,0:7:0.12:29,0,0	0/0:5,0:17:12.56:0,13,179	0/1:4,0:23:30.85:244,0,31	1/1:4,0:16:2.41:159,2,0	0/0:9,0:25:24.07:0,24,320	0/1:1,0:11:8.27:118,0,8	0/1:3,0:14:73.67:74,0,74	0/1:0,1:12:6.90:99,0,7	1/1:0,0:10:15.16:130,15,0	0/1:3,0:8:6.44:83,0,6	0/1:2,0:12:30.74:114,0,31	0/0:2,0:12:24.23:0,24,111	0/0:12,0:12:36.07:0,36,486	0/0:4,0:32:11.69:0,12,261	0/0:3,0:17:3.68:0,4,117	0/0:7,0:15:32.06:0,32,241	0/0:4,0:15:12.57:0,13,164	0/0:1,0:7:16.21:0,16,79	1/1:0,0:7:17.49:120,17,0	0/1:3,0:10:66.28:66,0,73	0/1:2,0:10:6.12:95,0,6	0/0:5,0:14:33.70:0,34,273	0/0:6,0:17:9.56:0,10,222	0/0:4,0:23:8.18:0,8,177	0/0:2,0:11:14.51:0,15,76
chr10	96297294	.	AT	A	339.80	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=1.371;DP=229;FS=10.964;HRun=8;HaplotypeScore=30.6532;InbreedingCoeff=0.7266;MQ=67.95;MQ0=0;MQRankSum=0.817;QD=14.77;ReadPosRankSum=-1.717;VQSLOD=1.4284;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:41.29:0,41,526	0/0:4,0:4:12.04:0,12,145	0/0:7,0:7:7.75:0,8,177	0/0:5,0:3:9.03:0,9,104	0/0:6,0:6:15.05:0,15,181	0/0:9,0:9:24.07:0,24,290	0/0:2,0:2:6.02:0,6,72	1/1:2,12:14:33.03:312,33,0	0/0:7,0:7:18.06:0,18,217	0/0:8,0:8:24.07:0,24,290	0/0:16,0:16:45.14:0,45,543	0/0:7,0:7:18.06:0,18,217	0/0:8,0:8:21.06:0,21,244	0/0:5,0:5:12.02:0,12,132	0/0:10,0:9:24.07:0,24,290	0/0:6,0:6:15.05:0,15,181	0/0:15,0:15:39.08:0,39,447	0/0:17,0:17:42.13:0,42,507	0/0:10,0:10:26.87:0,27,303	0/0:8,0:8:24.07:0,24,290	0/0:1,0:1:3.01:0,3,36	./.	0/0:9,0:9:27.05:0,27,310	0/0:2,0:2:5.95:0,6,54	0/0:10,0:10:27.07:0,27,314	0/0:12,0:12:36.11:0,36,433	0/0:6,0:6:15.05:0,15,181	1/1:1,8:9:15.02:145,15,0
chr10	96298541	.	AAAAG	A	1704.04	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=15.275;DP=627;FS=2.213;HRun=0;HaplotypeScore=136.2205;InbreedingCoeff=0.9176;MQ=60.76;MQ0=3;MQRankSum=-3.938;QD=7.19;ReadPosRankSum=1.632;VQSLOD=2.8756;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,165,3674	1/1:12,0:12:22.33:116,22,0	0/0:14,0:5:12.87:0,13,123	0/0:16,0:12:30.05:0,30,510	1/1:21,0:20:33.53:174,34,0	0/0:15,0:15:42.14:0,42,960	0/0:25,0:24:66.23:0,66,1558	0/0:35,0:34:96.21:0,96,1956	0/0:18,0:18:42.14:0,42,972	0/0:27,0:27:66.93:0,67,1472	0/0:20,0:20:45.15:0,45,1052	0/0:29,0:29:66.21:0,66,1551	0/0:17,0:17:39.12:0,39,852	0/0:17,0:17:45.15:0,45,1115	1/1:24,0:24:25.56:129,26,0	0/0:18,0:18:54.14:0,54,1210	1/1:23,1:24:24.21:229,24,0	1/1:26,0:26:42.61:214,43,0	1/1:16,1:16:32.16:229,32,0	1/1:20,1:21:32.32:207,32,0	1/1:25,0:25:28.33:143,28,0	0/0:16,0:16:44.86:0,45,879	0/0:14,0:14:36.11:0,36,842	0/0:39,0:39:81.75:0,82,1850	1/1:17,0:17:19.88:100,20,0	0/1:23,0:22:99:174,0,103	1/1:26,1:27:29.08:210,29,0	0/0:8,0:8:24.08:0,24,594
chr10	96298542	.	AAAG	A	5751.05	PASS	AB=0.575;AC=21;AF=0.375;AN=56;BaseQRankSum=13.583;DP=626;FS=3.204;HRun=0;HaplotypeScore=110.4965;InbreedingCoeff=0.9183;MQ=60.88;MQ0=3;MQRankSum=-3.806;QD=24.68;ReadPosRankSum=1.547;VQSLOD=5.0490;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,170,3183	1/1:1,11:12:23.97:306,24,0	0/0:14,0:5:12.44:0,12,106	0/0:16,0:12:29.83:0,30,413	1/1:1,20:20:41.42:543,41,0	0/0:15,0:15:42.13:0,42,791	0/0:25,0:24:66.21:0,66,1319	0/0:38,0:37:99:0,105,1853	0/0:18,0:18:42.11:0,42,795	0/0:26,0:26:69.81:0,70,1284	0/0:19,0:19:48.04:0,48,903	0/0:29,0:29:66.21:0,66,1322	0/0:17,0:17:39.09:0,39,729	0/0:17,0:17:45.15:0,45,930	1/1:2,20:22:30.07:436,30,0	0/0:20,0:20:60.16:0,60,1079	1/1:3,21:24:37.13:664,37,0	1/1:1,25:26:45.15:694,45,0	1/1:5,11:15:38.76:471,39,0	1/1:6,15:21:38.75:512,39,0	1/1:1,23:24:36.04:502,36,0	0/0:16,0:16:48.11:0,48,796	0/0:14,0:14:36.10:0,36,706	0/0:39,0:39:81.28:0,81,1612	1/1:2,15:17:21.07:324,21,0	0/1:6,17:22:64.29:668,0,64	1/1:7,20:27:45.45:631,45,0	0/0:8,0:8:24.08:0,24,495
chr10	96298543	.	AAG	A	2906.89	PASS	AB=0.920;AC=21;AF=0.375;AN=56;BaseQRankSum=15.607;DP=632;FS=7.176;HRun=0;HaplotypeScore=109.6699;InbreedingCoeff=0.9202;MQ=62.58;MQ0=3;MQRankSum=-3.889;QD=12.53;ReadPosRankSum=1.066;VQSLOD=2.8854;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,157,2555	1/1:11,0:11:23.69:167,24,0	0/0:16,0:7:15.26:0,15,114	0/0:16,0:12:29.66:0,30,340	1/1:20,1:20:39.50:284,39,0	0/0:15,0:15:42.12:0,42,645	0/0:26,0:25:72.19:0,72,1106	0/0:40,0:39:99:0,111,1566	0/0:18,0:18:41.95:0,42,638	0/0:26,0:26:66.51:0,67,1058	0/0:19,0:19:43.01:0,43,705	0/0:28,0:28:66.20:0,66,1067	0/0:16,0:16:39.09:0,39,595	0/0:17,0:17:45.15:0,45,747	1/1:22,0:22:29.87:227,30,0	0/0:21,0:21:63.14:0,63,905	1/1:24,0:24:45.36:345,45,0	1/1:26,0:26:44.83:346,45,0	1/1:15,1:15:38.75:311,39,0	1/1:20,1:21:38.70:305,39,0	1/1:24,0:24:35.82:270,36,0	0/0:17,0:17:51.09:0,51,682	0/0:16,0:16:42.07:0,42,620	0/0:39,0:39:81.26:0,81,1277	1/1:17,0:17:20.92:161,21,0	0/1:21,2:22:41.95:355,0,42	1/1:25,2:27:47.37:357,47,0	0/0:8,0:8:24.08:0,24,397
chr10	96299470	.	AAAG	A	2676.22	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.493;DP=724;FS=6.801;HRun=0;HaplotypeScore=110.4458;InbreedingCoeff=0.9973;MQ=79.63;MQ0=0;MQRankSum=-0.397;QD=37.69;ReadPosRankSum=4.050;VQSLOD=4.4398;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,45:45:99:1699,102,0	0/0:9,0:9:27.09:0,27,528	0/0:21,0:21:56.55:0,57,1156	0/0:23,0:23:61.99:0,62,1174	0/0:26,0:26:51.09:0,51,928	0/0:23,0:23:66.23:0,66,1466	0/0:33,0:33:96.33:0,96,2169	0/0:35,0:35:96.33:0,96,2157	0/0:31,0:31:90.31:0,90,2008	0/0:38,0:38:99:0,111,2505	0/0:18,0:18:54.19:0,54,1160	0/0:38,0:38:99:0,111,2514	0/0:25,0:25:75.26:0,75,1700	0/0:23,0:23:69.24:0,69,1544	0/0:27,0:27:81.28:0,81,1707	1/1:2,24:26:66.23:1099,66,0	0/0:18,0:18:39.13:0,39,788	0/0:9,0:9:21.07:0,21,404	0/0:24,0:24:54.16:0,54,1022	0/0:38,0:38:99:0,108,2176	0/0:28,0:28:66.14:0,66,1248	0/0:24,0:24:69.24:0,69,1552	0/0:18,0:18:54.18:0,54,1177	0/0:25,0:25:72.25:0,72,1620	0/0:31,0:31:90.31:0,90,1908	0/0:25,0:25:66.23:0,66,1375	0/0:31,0:31:90.31:0,90,1963	0/0:12,0:12:36.12:0,36,809
chr10	96299752	.	TA	T	3602.79	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=1.926;DP=435;FS=32.442;HRun=10;HaplotypeScore=61.8117;InbreedingCoeff=0.9737;MQ=74.27;MQ0=0;MQRankSum=1.404;QD=21.45;ReadPosRankSum=2.951;VQSLOD=2.3025;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1186	0/0:2,0:2:6.02:0,6,66	0/0:11,0:11:20.90:0,21,198	0/0:9,0:9:11.96:0,12,108	0/0:11,1:14:15.72:0,16,367	1/1:0,16:16:41.99:365,42,0	1/1:1,11:12:32.99:287,33,0	0/0:18,0:18:23.24:0,23,128	1/1:0,21:21:56.99:495,57,0	1/1:2,17:19:20.79:399,21,0	1/1:0,19:19:50.99:443,51,0	1/1:3,10:13:29.99:260,30,0	1/1:4,12:16:29.98:261,30,0	1/1:0,7:7:18:156,18,0	0/0:12,0:12:30.08:0,30,332	0/0:12,0:12:33.08:0,33,357	0/0:21,0:20:60.16:0,60,663	0/0:19,0:19:48.13:0,48,531	0/0:21,0:21:54.15:0,54,597	0/0:17,0:17:39.01:0,39,397	0/0:19,0:19:54.13:0,54,587	1/1:1,15:16:32.98:287,33,0	1/1:1,10:11:29.99:260,30,0	1/1:0,18:18:44.99:391,45,0	0/0:12,0:12:33.05:0,33,352	0/0:18,1:19:25.08:0,25,505	0/0:16,0:16:39.09:0,39,423	0/0:7,0:7:16.74:0,17,105
chr10	96300768	.	C	CAGCCAGTTGTG	23677.85	PASS	AB=0.617;AC=21;AF=0.375;AN=56;BaseQRankSum=-3.653;DP=675;FS=69.225;HRun=0;HaplotypeScore=221.4188;InbreedingCoeff=0.9156;MQ=73.88;MQ0=0;MQRankSum=-18.275;QD=103.40;ReadPosRankSum=-1.190;VQSLOD=2.1759;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,4789	1/1:5,3:9:15.05:749,15,0	0/0:24,0:23:48.16:0,48,1424	0/0:29,0:29:78.18:0,78,2282	1/1:14,5:20:21.30:645,21,0	0/0:16,0:15:42.14:0,42,1457	0/0:33,0:33:93.32:0,93,3175	0/0:38,0:38:96.32:0,96,2989	0/0:40,0:40:99:0,114,3798	0/0:33,0:33:90.29:0,90,2919	0/0:16,0:16:45.15:0,45,1454	0/0:31,0:31:87.30:0,87,2917	0/0:23,0:23:69.21:0,69,2204	0/0:26,0:26:75.18:0,75,2322	1/1:17,18:38:84.29:3929,84,0	0/0:21,0:21:60.19:0,60,1903	1/1:17,3:19:44.34:1953,44,0	1/1:6,6:12:30.10:1373,30,0	1/1:14,6:20:46.63:2317,47,0	1/1:5,9:15:42.14:1915,42,0	1/1:6,5:14:17.99:648,18,0	0/0:16,0:16:39.13:0,39,1243	0/0:23,0:23:66.21:0,66,2127	0/0:21,0:21:63.22:0,63,2035	1/1:9,8:17:45.15:2088,45,0	0/1:11,15:29:22.90:3373,0,23	1/1:8,24:35:96.33:4688,96,0	0/0:6,0:6:12.04:0,12,417
chr10	96300843	.	AG	A	2814.04	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.983;DP=546;FS=2.665;HRun=1;HaplotypeScore=125.1296;InbreedingCoeff=0.9879;MQ=87.52;MQ0=0;MQRankSum=-16.917;QD=21.48;ReadPosRankSum=3.992;VQSLOD=4.0334;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1915	1/1:0,4:4:11.98:96,12,0	0/0:30,0:30:86.76:0,87,1268	0/0:21,0:21:63.19:0,63,892	1/1:1,14:15:44.86:347,45,0	0/0:23,0:23:66.23:0,66,1053	0/0:23,0:23:66.23:0,66,1055	0/0:37,0:37:99:0,108,1684	0/0:33,0:33:99:0,99,1531	0/0:32,0:32:96.30:0,96,1468	0/0:25,0:25:72.25:0,72,1150	0/0:29,0:29:87.30:0,87,1391	0/0:12,0:12:36.12:0,36,573	0/0:25,0:25:75.25:0,75,1185	1/1:0,23:23:68.89:559,69,0	0/0:27,0:27:81.28:0,81,1295	1/1:0,7:7:17.98:147,18,0	1/1:0,5:5:14.48:109,14,0	1/1:0,5:5:14.99:131,15,0	1/1:0,15:15:41.93:340,42,0	1/1:2,7:9:17.19:125,17,0	0/0:13,0:13:39.13:0,39,621	0/0:22,0:22:66.23:0,66,1055	0/0:13,0:13:36.12:0,36,571	1/1:0,15:15:44.92:360,45,0	1/1:0,21:21:62.98:543,63,0	1/1:1,11:12:35.82:281,36,0	0/0:10,0:10:30.10:0,30,480
chr10	96300845	.	CTTGACCTA	C	8893.42	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=17.089;DP=553;FS=2.641;HRun=0;HaplotypeScore=185.4680;InbreedingCoeff=0.9897;MQ=88.26;MQ0=0;MQRankSum=-17.074;QD=68.41;ReadPosRankSum=3.981;VQSLOD=5.1726;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,5100	1/1:0,4:4:12.04:280,12,0	0/0:29,0:30:84.76:0,85,3264	0/0:21,0:21:63.22:0,63,2506	1/1:1,14:15:45.15:1040,45,0	0/0:23,0:23:68.72:0,69,2892	0/0:24,0:24:72.25:0,72,3174	0/0:37,0:37:99:0,105,4458	0/0:32,0:32:96.33:0,96,4140	0/0:32,0:32:93.28:0,93,4082	0/0:28,0:28:81.28:0,81,3585	0/0:29,0:29:87.29:0,87,3630	0/0:12,0:12:36.12:0,36,1582	0/0:25,0:25:72.25:0,72,3185	1/1:0,23:23:69.24:1616,69,0	0/0:29,0:29:87.30:0,87,3920	1/1:0,7:7:21.07:452,21,0	1/1:0,5:5:15.05:337,15,0	1/1:0,5:5:15.05:361,15,0	1/1:0,15:15:42.14:983,42,0	1/1:1,7:8:21.07:432,21,0	0/0:13,0:13:39.13:0,39,1700	0/0:22,0:22:66.23:0,66,2927	0/0:16,0:16:45.15:0,45,1897	1/1:0,15:15:45.15:1049,45,0	1/1:0,21:21:63.22:1508,63,0	1/1:1,11:12:36.12:835,36,0	0/0:10,0:10:30.05:0,30,1024
chr10	96301090	.	TCATTGAG	T	8850.28	PASS	AB=0.526;AC=21;AF=0.375;AN=56;BaseQRankSum=14.671;DP=526;FS=4.746;HRun=0;HaplotypeScore=120.2264;InbreedingCoeff=0.8911;MQ=83.84;MQ0=0;MQRankSum=-14.846;QD=55.66;ReadPosRankSum=3.062;VQSLOD=4.9613;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.16:0,66,2434	1/1:2,0:2:3.01:79,3,0	0/0:25,0:25:75.25:0,75,2731	0/0:13,0:13:39.13:0,39,1463	1/1:1,7:8:12.04:315,12,0	0/0:25,0:25:75.24:0,75,2913	0/0:18,0:18:54.19:0,54,2062	0/0:26,0:26:77.75:0,78,2933	0/0:23,0:23:69.24:0,69,2689	0/0:26,0:26:75.26:0,75,2953	0/0:29,0:29:81.28:0,81,3206	0/0:20,0:20:60.21:0,60,2405	0/0:17,0:17:51.18:0,51,1918	0/0:17,0:17:51.18:0,51,1984	1/1:0,15:15:36.12:922,36,0	0/0:15,0:15:45.15:0,45,1791	1/1:3,18:21:39.13:1026,39,0	1/1:3,10:13:21.07:548,21,0	1/1:0,17:17:51.16:1258,51,0	1/1:1,22:22:51.18:1341,51,0	1/1:1,11:12:18.02:402,18,0	0/0:25,0:25:63.22:0,63,2437	0/0:29,0:29:84.29:0,84,3320	0/0:21,0:21:63.19:0,63,2384	1/1:0,14:14:30.10:789,30,0	0/1:2,18:20:64.09:1302,0,64	1/1:0,14:14:33.11:868,33,0	0/0:15,0:15:45.11:0,45,1550
chr10	96301378	.	GTA	G	1991.78	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=13.615;DP=487;FS=28.075;HRun=0;HaplotypeScore=103.4128;InbreedingCoeff=0.9347;MQ=76.72;MQ0=10;MQRankSum=-4.707;QD=12.22;ReadPosRankSum=4.308;VQSLOD=1.7041;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:55.45:0,55,411	1/1:8,0:8:23.93:192,24,0	0/0:32,0:27:68.71:0,69,612	0/0:30,0:24:59.74:0,60,547	1/1:7,0:7:2.66:23,3,0	0/0:22,0:22:56.94:0,57,495	0/0:24,0:23:47.91:0,48,429	0/0:19,0:18:47.81:0,48,397	0/0:17,0:17:36.02:0,36,371	0/0:19,0:19:47.77:0,48,453	0/0:15,0:15:27:0,27,254	0/0:14,0:14:23.98:0,24,253	0/0:13,0:13:35.94:0,36,354	0/0:19,0:18:41.24:0,41,342	1/1:9,0:9:11.91:90,12,0	0/0:16,0:16:34.75:0,35,252	1/1:18,0:18:34.93:245,35,0	1/1:12,0:12:32.90:264,33,0	1/1:3,13:15:38.51:283,39,0	1/1:6,0:6:11.95:94,12,0	1/1:41,0:38:38.86:306,39,0	0/0:15,0:15:32.95:0,33,320	0/0:9,0:9:18.02:0,18,217	0/0:23,0:23:42.43:0,42,401	1/1:9,0:8:20.93:172,21,0	1/1:24,0:24:5.69:369,6,0	1/1:13,0:13:7.91:169,8,0	0/0:10,0:10:27:0,27,325
chr10	96301380	.	ATATGTG	A	2364.97	PASS	AB=0.824;AC=21;AF=0.375;AN=56;BaseQRankSum=13.729;DP=502;FS=33.223;HRun=0;HaplotypeScore=131.2733;InbreedingCoeff=0.8694;MQ=73.58;MQ0=12;MQRankSum=-4.789;QD=14.60;ReadPosRankSum=4.524;VQSLOD=0.8723;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:55.26:0,55,432	1/1:8,0:8:23.96:240,24,0	0/0:29,0:24:68.71:0,69,612	0/0:30,0:24:59.74:0,60,547	1/1:7,0:7:2.73:23,3,0	0/0:25,0:25:59.97:0,60,698	0/0:25,0:24:50.94:0,51,647	0/0:19,0:18:47.85:0,48,400	0/0:17,0:17:36.11:0,36,630	0/0:18,0:18:50.98:0,51,738	0/0:16,0:16:27:0,27,358	0/0:15,0:15:23.99:0,24,411	0/0:15,0:15:41.96:0,42,595	0/0:23,0:22:44.78:0,45,574	1/1:9,0:9:12.79:92,13,0	0/0:17,0:17:34.55:0,35,250	1/1:18,0:18:34.72:244,35,0	1/1:9,0:12:22.39:307,22,0	1/1:18,0:17:39.92:285,40,0	1/1:6,0:5:11.95:94,12,0	1/1:38,0:35:39.75:308,40,0	0/0:19,0:19:39:0,39,632	0/0:11,0:11:21.03:0,21,402	0/0:25,0:25:42.43:0,42,567	1/1:6,3:9:21.02:292,21,0	1/1:20,2:22:5.71:457,6,0	0/1:11,2:14:19.87:235,0,20	0/0:11,0:11:30.01:0,30,613
chr10	96301382	.	A	ATG	722.31	PASS	AB=0.893;AC=17;AF=0.405;AN=42;BaseQRankSum=-4.090;DP=520;FS=2.310;HRun=0;HaplotypeScore=111.5976;InbreedingCoeff=-0.0082;MQ=67.71;MQ0=16;MQRankSum=1.042;QD=2.96;ReadPosRankSum=0.156;VQSLOD=2.3698;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:5.68:0,6,28	./.	./.	./.	./.	0/1:19,6:26:14.30:79,0,14	0/1:21,4:24:34.85:35,0,37	./.	1/1:11,7:21:15.14:219,15,0	0/1:21,0:21:5.52:124,0,6	1/1:9,6:16:6.02:88,6,0	0/1:8,7:15:22.78:79,0,23	0/1:19,0:17:7.11:7,0,18	0/1:14,9:23:7.69:102,0,8	1/1:10,0:10:1.25:3,1,0	0/0:13,0:19:5.68:0,6,28	0/1:17,0:16:0:1,0,0	0/0:12,0:12:5.68:0,6,28	./.	./.	0/0:41,0:37:0.68:0,1,2	0/0:21,0:21:0.81:0,1,49	0/1:11,0:11:34.50:35,0,37	1/1:18,10:29:6.01:70,6,0	0/0:10,0:9:8.18:0,8,37	0/0:21,0:21:5.37:0,5,27	0/0:14,0:14:5.68:0,6,28	0/1:10,0:10:9.97:10,0,73
chr10	96301455	.	GAATAA	G	6865.47	PASS	AB=0.542;AC=21;AF=0.375;AN=56;BaseQRankSum=7.264;DP=448;FS=2.665;HRun=0;HaplotypeScore=109.4500;InbreedingCoeff=0.9130;MQ=76.54;MQ0=2;MQRankSum=-10.014;QD=41.11;ReadPosRankSum=1.005;VQSLOD=4.8634;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.21:0,60,1764	1/1:0,5:5:15.05:304,15,0	0/0:18,0:13:33.11:0,33,859	0/0:19,0:15:36.12:0,36,1013	1/1:1,10:11:12.04:243,12,0	0/0:10,0:10:27.09:0,27,818	0/0:17,0:17:42.14:0,42,1273	0/0:31,0:31:78.27:0,78,2260	0/0:20,0:20:48.16:0,48,1395	0/0:11,0:11:33.11:0,33,1000	0/0:10,0:10:27.09:0,27,780	0/0:12,0:12:36.12:0,36,1014	0/0:21,0:21:63.22:0,63,1760	0/0:16,0:16:42.14:0,42,1253	1/1:3,9:12:27.09:547,27,0	0/0:11,0:11:24.08:0,24,705	1/1:4,20:24:36.12:730,36,0	1/1:5,7:12:15.05:304,15,0	1/1:1,9:10:27.06:442,27,0	1/1:1,20:21:45.15:911,45,0	1/1:1,14:15:24.08:477,24,0	0/0:24,0:24:63.22:0,63,1831	0/0:15,0:15:45.15:0,45,1351	0/0:13,0:13:30.06:0,30,796	1/1:1,17:18:45.15:910,45,0	0/1:2,11:13:54.86:598,0,55	1/1:2,24:26:69.24:1400,69,0	0/0:10,0:10:30.10:0,30,850
chr10	96301977	.	CG	C	5963.18	PASS	AB=0.533;AC=21;AF=0.375;AN=56;BaseQRankSum=14.624;DP=548;FS=16.445;HRun=4;HaplotypeScore=79.0514;InbreedingCoeff=0.9396;MQ=93.54;MQ0=0;MQRankSum=-2.059;QD=30.27;ReadPosRankSum=3.661;VQSLOD=3.4988;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,108,1414	1/1:0,9:9:27.08:323,27,0	0/0:25,0:25:66.18:0,66,886	0/0:24,0:24:69.20:0,69,942	1/1:1,12:13:24.03:272,24,0	0/0:22,0:22:57.03:0,57,729	0/0:21,0:21:54.16:0,54,736	0/0:24,0:23:60.19:0,60,820	0/0:20,0:20:60.20:0,60,838	0/0:25,0:26:72.22:0,72,959	0/0:11,0:11:27.04:0,27,323	0/0:24,0:24:72.24:0,72,1000	0/0:18,0:18:51.07:0,51,655	0/0:18,0:18:54.15:0,54,718	1/1:0,16:16:45.14:535,45,0	0/0:15,0:15:45.14:0,45,612	1/1:1,23:24:51.16:612,51,0	1/1:0,23:23:66.20:791,66,0	1/1:3,14:17:43:495,43,0	1/1:3,15:18:48.09:547,48,0	1/1:5,30:35:96.11:1112,96,0	0/0:10,0:10:27.08:0,27,358	0/0:14,0:14:42.08:0,42,508	0/0:29,0:29:84.22:0,84,1120	1/1:1,6:7:5.08:200,5,0	0/1:2,14:16:0.84:436,0,1	1/1:2,17:19:54.16:641,54,0	0/0:10,0:10:30.08:0,30,401
chr10	96301981	.	GT	G	1519.10	PASS	AB=0.985;AC=18;AF=0.321;AN=56;BaseQRankSum=16.899;DP=554;FS=18.606;HRun=5;HaplotypeScore=93.7433;InbreedingCoeff=0.7113;MQ=96.74;MQ0=0;MQRankSum=-3.333;QD=7.63;ReadPosRankSum=4.192;VQSLOD=0.0188;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1433	1/1:9,0:9:24.19:114,24,0	0/0:28,0:28:70.97:0,71,929	0/0:27,0:27:69.09:0,69,909	0/1:12,0:12:13.22:42,0,13	0/0:20,0:20:51.15:0,51,663	0/0:19,0:19:54.17:0,54,720	0/0:24,0:23:66.19:0,66,841	0/0:20,0:20:60.19:0,60,805	0/0:26,0:26:78.09:0,78,1002	0/0:9,0:9:18.06:0,18,246	0/0:26,0:26:75.21:0,75,975	0/0:18,0:18:45.14:0,45,600	0/0:17,0:17:48.15:0,48,642	1/1:16,0:16:37.76:160,38,0	0/0:16,0:16:48.15:0,48,639	0/1:27,0:27:34.53:132,0,35	1/1:25,0:25:16.76:211,17,0	1/1:16,0:16:31.84:115,32,0	1/1:15,1:16:39.79:186,40,0	1/1:32,4:36:40.85:370,41,0	0/0:10,0:10:27.06:0,27,338	0/0:15,0:15:39.11:0,39,501	0/0:30,0:30:84.23:0,84,1109	0/1:8,0:8:6.51:43,0,7	0/1:15,1:16:4.93:118,0,5	1/1:17,1:18:48.27:231,48,0	0/0:10,0:10:27.09:0,27,369
chr10	96302120	.	C	CA	10819.69	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-13.074;DP=600;FS=4.021;HRun=3;HaplotypeScore=125.2194;InbreedingCoeff=0.9896;MQ=94.47;MQ0=0;MQRankSum=-2.543;QD=40.52;ReadPosRankSum=4.965;VQSLOD=3.5770;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,44:45:99:1762,120,0	0/0:10,0:10:30.10:0,30,389	0/0:28,0:28:75.11:0,75,903	0/0:26,0:26:78.23:0,78,983	0/0:20,0:20:60.20:0,60,778	1/1:1,18:19:51.17:764,51,0	1/1:1,17:18:48.16:720,48,0	0/0:29,0:29:84.27:0,84,1090	1/1:0,25:25:75.25:1124,75,0	1/1:1,31:32:51.43:1244,51,0	1/1:1,12:13:36.08:514,36,0	1/1:1,26:27:69.23:1034,69,0	1/1:0,13:13:39.13:575,39,0	1/1:0,19:19:54.18:809,54,0	0/0:18,0:18:54.16:0,54,686	1/1:0,5:5:15.05:225,15,0	0/0:32,0:32:96.31:0,96,1245	0/0:34,0:34:93.27:0,93,1172	0/0:19,0:19:57.15:0,57,709	0/0:23,0:23:66.20:0,66,840	0/0:33,0:33:96.28:0,96,1227	1/1:0,12:12:30.10:450,30,0	1/1:0,15:15:45.15:663,45,0	1/1:1,23:24:63.21:936,63,0	0/0:19,0:19:57.18:0,57,739	0/0:17,1:18:9.19:0,9,604	0/0:16,0:16:48.16:0,48,623	0/0:8,0:8:24.08:0,24,312
chr10	96303137	.	T	TTTC	3124.72	PASS	AB=0.737;AC=9;AF=0.161;AN=56;BaseQRankSum=-9.349;DP=509;FS=213.096;HRun=0;HaplotypeScore=106.7461;InbreedingCoeff=-0.1960;MQ=73.59;MQ0=0;MQRankSum=-9.267;QD=18.06;ReadPosRankSum=-0.443;VQSLOD=-0.0672;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.11:0,60,863	0/0:3,0:3:1.20:0,1,19	0/0:23,0:21:33.72:0,34,665	0/0:19,0:19:41.12:0,41,440	0/1:14,6:20:99:240,0,172	0/0:12,0:12:36.05:0,36,453	0/0:9,0:9:24.07:0,24,351	0/0:22,0:22:66.14:0,66,901	0/0:16,0:16:48.14:0,48,706	0/0:26,0:26:72.20:0,72,1026	0/0:25,0:25:63.19:0,63,959	0/0:18,0:18:48.15:0,48,749	0/0:20,0:20:54.16:0,54,801	0/0:22,0:22:66.15:0,66,907	0/1:14,4:18:99:267,0,154	0/0:25,0:25:65.21:0,65,926	0/1:8,5:14:64.08:232,0,64	0/1:5,5:10:16.31:306,0,16	0/1:9,10:20:81.79:673,0,82	0/1:15,11:26:99:489,0,232	0/0:11,1:11:23.67:0,24,154	0/0:20,0:20:56.15:0,56,704	0/0:20,0:20:60.18:0,60,894	0/0:14,0:14:39.10:0,39,544	0/1:14,5:18:99:375,0,149	0/1:20,7:27:99:344,0,277	0/1:12,6:17:99:338,0,163	0/0:10,0:10:27.56:0,28,420
chr10	96303172	.	TCC	T	6771.08	PASS	AB=0.500;AC=27;AF=0.482;AN=56;BaseQRankSum=-6.041;DP=409;FS=30.294;HRun=10;HaplotypeScore=63.0380;InbreedingCoeff=0.8452;MQ=85.80;MQ0=1;MQRankSum=-0.467;QD=25.84;ReadPosRankSum=3.114;VQSLOD=2.5903;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,1:24:19.47:0,19,138	0/0:0,0:2:3:0,3,29	0/0:18,0:17:35.75:0,36,481	0/0:12,0:13:28.65:0,29,415	0/0:6,0:7:5.98:0,6,67	1/1:1,17:18:45.12:502,45,0	1/1:1,6:7:15.04:167,15,0	1/1:8,23:31:63.14:702,63,0	1/1:3,17:20:51.11:569,51,0	1/1:0,24:24:66.17:736,66,0	1/1:2,29:31:69.16:769,69,0	1/1:0,13:13:36.10:401,36,0	1/1:0,25:25:69.19:769,69,0	1/1:2,19:21:54.13:602,54,0	0/0:6,0:11:24.02:0,24,266	0/1:0,2:20:15.96:16,0,103	0/0:12,0:12:27.09:0,27,429	0/0:5,0:6:18.06:0,18,267	0/0:5,0:8:15.04:0,15,175	0/0:12,0:15:21.01:0,21,249	0/0:4,0:10:7.22:0,7,70	1/1:2,13:15:35.97:401,36,0	1/1:2,17:19:51.13:569,51,0	1/1:0,15:15:42.11:468,42,0	0/0:5,0:6:11.99:0,12,127	0/0:7,0:8:9.02:0,9,116	0/0:5,0:6:8.98:0,9,77	1/1:0,3:3:9.02:100,9,0
chr10	96303682	.	G	GCCATCAAGAGCA	33399.28	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-2.937;DP=656;FS=1.348;HRun=0;HaplotypeScore=222.4705;InbreedingCoeff=0.9987;MQ=74.78;MQ0=0;MQRankSum=-19.395;QD=126.04;ReadPosRankSum=-0.882;VQSLOD=4.7090;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,105,3538	1/1:7,6:14:36.12:1768,36,0	0/0:23,0:23:52.77:0,53,2006	0/0:31,0:31:86.46:0,86,2564	1/1:14,11:26:66.22:2588,66,0	0/0:14,0:14:36.12:0,36,1288	0/0:32,0:32:87.28:0,87,2899	0/0:36,0:36:96.29:0,96,2955	0/0:20,0:20:54.17:0,54,1857	0/0:17,0:17:45.15:0,45,1691	0/0:9,0:9:24.08:0,24,840	0/0:24,0:24:72.23:0,72,2581	0/0:23,0:23:66.23:0,66,2317	0/0:26,0:26:78.23:0,78,2608	1/1:16,10:28:78.27:3969,78,0	0/0:26,0:26:69.20:0,69,2291	1/1:11,6:19:39.13:1979,39,0	1/1:4,4:8:24.08:1269,24,0	1/1:21,5:27:72.25:3189,72,0	1/1:10,11:22:60.20:2578,60,0	1/1:16,10:30:57.20:3183,57,0	0/0:9,0:9:21.07:0,21,790	0/0:16,0:16:33.10:0,33,1110	0/0:32,0:32:87.30:0,87,3105	1/1:6,13:20:54.18:2811,54,0	1/1:13,15:30:84.25:4517,84,0	1/1:12,23:39:99:5549,105,0	0/0:12,0:12:36.12:0,36,1354
chr10	96303859	.	AC	A	8778.48	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=13.110;DP=692;FS=6.122;HRun=1;HaplotypeScore=68.8941;InbreedingCoeff=0.9997;MQ=72.75;MQ0=0;MQRankSum=2.420;QD=35.25;ReadPosRankSum=5.633;VQSLOD=4.7177;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1382	0/0:16,0:16:48.13:0,48,663	0/0:17,0:17:45.03:0,45,594	0/0:19,0:19:49.34:0,49,600	0/0:32,0:32:95.84:0,96,1232	1/1:0,26:26:60.20:830,60,0	1/1:0,14:14:24.08:334,24,0	0/0:47,0:49:99:0,141,1820	1/1:0,26:26:69.23:958,69,0	1/1:0,35:35:99:1383,105,0	1/1:0,20:20:60.11:790,60,0	1/1:0,24:24:63.21:873,63,0	1/1:0,15:15:39.13:541,39,0	1/1:1,21:22:57.19:783,57,0	0/0:24,0:24:66.70:0,67,884	0/0:28,0:28:84.23:0,84,1151	0/0:27,0:27:80.90:0,81,995	0/0:25,0:25:69.12:0,69,949	0/0:25,0:25:72.07:0,72,886	0/0:19,0:19:54.14:0,54,744	0/0:21,0:21:63.18:0,63,856	1/1:0,22:22:53.98:673,54,0	1/1:0,21:21:54.18:741,54,0	1/1:0,24:24:63.21:875,63,0	0/0:24,0:24:72.01:0,72,933	0/0:29,0:29:84.03:0,84,1078	0/0:38,0:38:99:0,114,1458	0/0:14,0:14:42.09:0,42,568
chr10	96304879	.	GAGA	G	82.99	PASS	AB=0.894;AC=4;AF=0.077;AN=52;BaseQRankSum=-0.321;DP=269;FS=5.250;HRun=0;HaplotypeScore=76.1944;InbreedingCoeff=-0.0414;MQ=24.62;MQ0=51;MQRankSum=0.039;QD=1.73;ReadPosRankSum=-2.571;VQSLOD=0.8901;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:8:10.03:0,10,55	0/0:4,0:4:6.02:0,6,90	./.	./.	0/1:13,0:11:12.15:12,0,89	0/0:14,0:10:11.84:0,12,102	0/1:21,0:5:40.82:59,0,41	0/0:36,0:25:59.76:0,60,325	0/0:5,0:3:3.43:0,3,20	0/0:9,0:6:8.16:0,8,49	0/0:8,0:5:0.47:0,0,1	0/0:11,0:7:9.75:0,10,101	0/0:6,0:5:2.96:0,3,19	0/0:8,0:5:8.91:0,9,61	0/0:11,0:7:9.03:0,9,155	0/0:7,0:4:6.40:0,6,40	0/1:6,1:6:39.63:40,0,61	0/0:3,0:2:2.88:0,3,15	0/1:4,3:4:14.39:74,0,14	0/0:9,0:6:14.83:0,15,186	0/0:16,0:10:14.87:0,15,107	0/0:9,0:5:5.93:0,6,65	0/0:9,0:7:5.93:0,6,40	0/0:8,0:3:1.55:0,2,4	0/0:11,0:9:12.03:0,12,192	0/0:15,0:9:21.38:0,21,277	0/0:5,0:5:9.03:0,9,144	0/0:3,0:2:1.87:0,2,16
chr10	96304949	.	AGTT	A	5366.42	PASS	AB=0.550;AC=51;AF=0.911;AN=56;BaseQRankSum=4.323;DP=374;FS=41.468;HRun=0;HaplotypeScore=83.2923;InbreedingCoeff=0.4600;MQ=66.54;MQ0=3;MQRankSum=-4.710;QD=16.36;ReadPosRankSum=1.960;VQSLOD=2.6905;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:22:2.96:19,3,0	1/1:0,4:4:2.90:16,3,0	0/0:26,0:19:48.14:0,48,886	0/0:20,0:18:41.30:0,41,735	1/1:0,16:16:12.03:140,12,0	1/1:0,10:10:5.94:41,6,0	1/1:16,0:12:27.03:313,27,0	1/1:3,26:28:55.12:945,55,0	1/1:11,0:11:32.77:323,33,0	1/1:0,18:18:29.91:345,30,0	1/1:0,10:10:5.98:57,6,0	0/1:2,9:10:21.94:59,0,22	1/1:0,10:10:5.97:62,6,0	1/1:0,8:8:5.92:40,6,0	1/1:14,0:12:27.05:354,27,0	1/1:7,1:7:17.96:195,18,0	1/1:0,7:7:3.01:46,3,0	1/1:4,0:4:9.03:130,9,0	1/1:5,10:14:29.79:322,30,0	1/1:11,2:13:38.75:413,39,0	1/1:12,0:12:23.99:286,24,0	1/1:0,16:16:23.81:209,24,0	1/1:0,14:14:12.04:144,12,0	1/1:0,6:6:6.02:73,6,0	1/1:0,14:14:8.99:104,9,0	1/1:0,17:17:41.92:442,42,0	1/1:0,13:13:9.02:109,9,0	1/1:0,9:9:12.04:179,12,0
chr10	96305624	.	A	ATTGT	17258.10	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-12.198;DP=632;FS=9.194;HRun=0;HaplotypeScore=99.0540;InbreedingCoeff=0.9977;MQ=81.66;MQ0=0;MQRankSum=-4.078;QD=63.22;ReadPosRankSum=0.805;VQSLOD=6.9084;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,126,2324	1/1:3,14:17:42.10:1015,42,0	0/0:15,0:15:45.15:0,45,797	0/0:20,0:20:48.16:0,48,838	1/1:1,15:16:42.06:919,42,0	0/0:21,0:21:60.21:0,60,1120	0/0:26,0:26:69.24:0,69,1280	0/0:41,0:41:99:0,117,2142	0/0:26,0:26:78.25:0,78,1424	0/0:20,0:20:60.20:0,60,1098	0/0:17,0:17:48.16:0,48,890	0/0:21,0:21:57.18:0,57,1031	0/0:20,0:20:60.21:0,60,1119	0/0:20,0:20:57.19:0,57,1064	1/1:1,21:21:60.21:1600,60,0	0/0:12,0:12:36.12:0,36,672	1/1:1,26:27:75.21:1940,75,0	1/1:2,17:19:51.10:1234,51,0	1/1:12,14:29:75.19:1767,75,0	1/1:2,17:21:57.19:1465,57,0	1/1:4,38:45:99:2601,111,0	0/0:14,0:14:39.13:0,39,728	0/0:15,0:15:45.14:0,45,803	0/0:20,0:20:51.17:0,51,952	1/1:5,15:20:45.11:1096,45,0	1/1:2,25:31:37.27:2125,37,0	1/1:3,23:26:60.61:1495,61,0	0/0:5,0:5:15.05:0,15,280
chr10	96306088	.	TC	T	1592.34	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.607;DP=631;FS=1.257;HRun=2;HaplotypeScore=65.6698;InbreedingCoeff=0.9993;MQ=95.68;MQ0=0;MQRankSum=-4.604;QD=33.88;ReadPosRankSum=3.992;VQSLOD=3.8837;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.26:0,78,1169	0/0:9,0:9:27.09:0,27,404	0/0:31,0:31:87.29:0,87,1294	0/0:29,0:29:72.24:0,72,1070	0/0:17,0:17:48.02:0,48,705	0/0:17,0:17:51.17:0,51,755	0/0:36,0:36:99:0,105,1574	0/0:31,0:31:90.30:0,90,1349	0/0:23,0:23:63.21:0,63,944	0/0:26,0:26:78.26:0,78,1153	0/0:15,0:15:42.14:0,42,629	0/0:15,0:15:45.14:0,45,655	0/0:21,0:21:63.21:0,63,943	0/0:22,0:22:66.21:0,66,969	0/0:28,0:28:84.28:0,84,1254	0/0:16,0:16:48.16:0,48,718	1/1:0,25:25:72.23:935,72,0	1/1:1,21:22:60.18:779,60,0	0/0:18,0:18:54.17:0,54,789	0/0:11,0:11:33.11:0,33,494	0/0:37,0:37:99:0,108,1597	0/0:15,0:15:45.13:0,45,636	0/0:18,0:18:51.16:0,51,738	0/0:48,0:48:99:0,144,2112	0/0:14,0:14:39.12:0,39,566	0/0:17,0:17:48.16:0,48,719	0/0:20,0:19:60.16:0,60,871	0/0:21,0:21:63.21:0,63,943
chr10	96306478	.	CT	C	2445.10	PASS	AB=0.871;AC=30;AF=0.536;AN=56;BaseQRankSum=2.948;DP=441;FS=19.306;HRun=12;HaplotypeScore=61.0791;InbreedingCoeff=0.6598;MQ=69.07;MQ0=3;MQRankSum=1.472;QD=9.98;ReadPosRankSum=3.006;VQSLOD=1.0712;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,2:31:25.64:0,26,610	0/0:3,0:3:6.01:0,6,61	0/0:16,1:12:12.74:0,13,144	0/0:16,0:10:14.85:0,15,126	0/0:8,0:8:18.51:0,19,184	1/1:1,14:15:38.85:302,39,0	1/1:4,17:21:50.78:395,51,0	1/1:13,10:25:33.90:244,34,0	1/1:2,10:12:23.89:186,24,0	1/1:3,11:14:29.87:232,30,0	1/1:1,4:6:13.99:99,14,0	1/1:3,14:17:12.29:232,12,0	1/1:2,14:16:35.84:278,36,0	1/1:3,3:6:5.95:46,6,0	0/1:17,2:20:20.25:20,0,212	0/1:13,2:15:2.18:2,0,162	0/0:34,4:38:30.94:0,31,694	0/0:17,1:19:11.94:0,12,317	0/0:18,1:18:18.80:0,19,355	0/1:7,1:9:5.44:5,0,97	0/1:18,5:25:18.78:19,0,359	1/1:1,9:10:23.90:186,24,0	1/1:2,4:6:2.91:23,3,0	1/1:5,18:24:50.30:377,50,0	0/0:9,0:9:18.04:0,18,183	0/0:11,0:11:24.03:0,24,234	0/0:22,1:22:18.75:0,19,338	1/1:3,0:2:2.02:6,2,0
chr10	96306564	.	TCACA	T	3589.58	PASS	AC=22;AF=0.423;AN=52;BaseQRankSum=5.048;DP=243;FS=1.444;HRun=0;HaplotypeScore=57.7990;InbreedingCoeff=0.9044;MQ=82.28;MQ0=4;MQRankSum=-8.536;QD=40.33;ReadPosRankSum=-2.087;VQSLOD=3.3284;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:27.09:0,27,657	1/1:0,2:2:6.02:120,6,0	0/0:29,0:22:58.78:0,59,1262	0/0:29,0:19:23.25:0,23,689	1/1:3,5:8:15.03:259,15,0	0/0:3,0:3:6.02:0,6,166	0/0:11,0:11:30.10:0,30,747	./.	0/0:5,0:5:12.04:0,12,290	0/0:11,0:11:33.11:0,33,856	0/0:7,0:7:17.99:0,18,477	0/0:6,0:6:12.04:0,12,298	0/0:6,0:6:15.05:0,15,412	0/0:2,0:2:6.02:0,6,122	1/1:0,7:7:12.04:239,12,0	0/0:4,0:4:12.04:0,12,320	1/1:5,3:8:21.07:360,21,0	1/1:6,2:8:24.05:397,24,0	1/1:2,8:9:27.09:532,27,0	1/1:2,7:9:17.98:271,18,0	1/1:3,5:8:8.97:152,9,0	0/0:10,0:10:27.09:0,27,728	0/0:10,0:10:21.07:0,21,544	0/0:4,0:4:9.03:0,9,248	1/1:3,4:7:15.05:285,15,0	1/1:0,10:9:24.08:446,24,0	1/1:3,9:12:29.32:530,29,0	./.
chr10	96306565	.	CACA	C	1761.86	PASS	AC=22;AF=0.423;AN=52;BaseQRankSum=7.419;DP=241;FS=1.446;HRun=0;HaplotypeScore=59.6981;InbreedingCoeff=0.8994;MQ=82.59;MQ0=3;MQRankSum=-7.855;QD=20.25;ReadPosRankSum=-2.033;VQSLOD=3.1279;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:27.09:0,27,583	1/1:2,0:2:6.01:58,6,0	0/0:25,0:22:44.14:0,44,1075	0/0:30,0:19:26.09:0,26,604	1/1:7,1:8:14.39:122,14,0	0/0:3,0:3:6.02:0,6,142	0/0:11,0:11:30.10:0,30,630	./.	0/0:5,0:5:12.04:0,12,256	0/0:11,0:11:33.11:0,33,736	0/0:7,0:7:17.99:0,18,406	0/0:6,0:6:12.04:0,12,262	0/0:6,0:6:15.05:0,15,353	0/0:2,0:2:6.02:0,6,103	1/1:7,0:7:12.02:117,12,0	0/0:4,0:4:12.04:0,12,282	1/1:6,1:7:21.05:239,21,0	1/1:6,2:8:24.02:276,24,0	1/1:8,2:9:27.04:263,27,0	1/1:7,1:8:17.94:149,18,0	1/1:6,2:8:6.84:61,7,0	0/0:10,0:10:27.09:0,27,617	0/0:10,0:10:21.07:0,21,453	0/0:4,0:4:9.03:0,9,212	1/1:4,3:7:15:135,15,0	1/1:10,0:9:24.05:262,24,0	1/1:10,2:12:29.14:285,29,0	./.
chr10	96306583	.	C	CTT	2851.75	PASS	AB=1.000;AC=50;AF=0.926;AN=54;BaseQRankSum=-0.447;DP=295;FS=38.157;HRun=15;HaplotypeScore=98.5728;InbreedingCoeff=0.3924;MQ=69.34;MQ0=15;MQRankSum=-4.255;QD=10.68;ReadPosRankSum=-1.726;VQSLOD=-0.7256;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:13:14.98:142,15,0	1/1:3,1:4:3.01:38,3,0	0/0:28,0:17:9.49:0,9,90	0/1:21,0:10:2.47:2,0,6	1/1:13,3:15:9.94:60,10,0	1/1:4,0:4:11.98:105,12,0	1/1:15,0:13:20.93:186,21,0	0/1:2,0:1:0:0,0,0	1/1:8,0:8:18.03:176,18,0	1/1:13,0:12:20.85:187,21,0	1/1:12,0:14:23.37:200,23,0	1/1:4,0:2:3.89:33,4,0	1/1:7,0:6:10.26:94,10,0	1/1:10,0:8:20.83:193,21,0	1/1:5,0:7:15.24:140,15,0	1/1:7,0:7:9.02:88,9,0	1/1:7,1:10:0.42:132,0,0	1/1:6,1:9:14.37:125,14,0	1/1:13,1:17:25.11:214,25,0	1/1:7,5:12:21.88:191,22,0	1/1:4,3:9:8.02:56,8,0	1/1:5,0:5:4.82:36,5,0	1/1:7,0:8:10.26:89,10,0	1/1:5,0:7:3:29,3,0	1/1:10,4:16:16.64:114,17,0	1/1:4,1:6:9:87,9,0	1/1:13,2:17:24.58:239,25,0	./.
chr10	96307577	.	GGTACCATC	G	481.99	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=3.089;DP=567;FS=1.301;HRun=0;HaplotypeScore=158.9119;InbreedingCoeff=0.8996;MQ=73.61;MQ0=0;MQRankSum=-2.748;QD=26.78;ReadPosRankSum=-2.184;VQSLOD=3.2071;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.25:0,72,2906	0/0:9,0:9:24.08:0,24,976	0/0:8,0:8:9.55:0,10,436	0/0:11,0:11:18.06:0,18,575	0/0:9,0:9:18.06:0,18,679	0/0:18,0:18:48.16:0,48,1967	0/0:24,0:24:60.21:0,60,2555	1/1:9,9:18:24.08:575,24,0	0/0:23,0:23:66.23:0,66,2660	0/0:34,0:34:84.29:0,84,3457	0/0:6,0:6:12.04:0,12,479	0/0:34,0:34:90.31:0,90,3803	0/0:21,0:21:57.20:0,57,2280	0/0:22,0:22:63.22:0,63,2633	0/0:20,0:20:42.14:0,42,1790	0/0:23,0:23:57.16:0,57,2149	0/0:33,0:33:87.30:0,87,3652	0/0:25,0:25:69.24:0,69,2949	0/0:22,0:22:57.20:0,57,2314	0/0:14,0:14:36.12:0,36,1358	0/0:60,0:60:99:0,160,6572	0/0:15,0:15:39.13:0,39,1658	0/0:13,0:13:30.57:0,31,1284	0/0:25,0:25:69.24:0,69,2936	0/0:11,0:11:18.53:0,19,758	0/0:18,0:18:51.18:0,51,2143	0/0:24,0:24:63.20:0,63,2382	./.
chr10	96307667	.	G	GCGGACCAT	6664.19	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-5.275;DP=678;FS=4.921;HRun=0;HaplotypeScore=160.4438;InbreedingCoeff=0.9951;MQ=88.46;MQ0=0;MQRankSum=-12.087;QD=68.00;ReadPosRankSum=-1.879;VQSLOD=4.5674;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,22:40:69.24:2764,69,0	0/0:14,0:14:39.12:0,39,944	0/0:32,0:32:72.23:0,72,1819	0/0:19,0:19:42.11:0,42,1016	0/0:27,0:27:75.26:0,75,2012	0/0:28,0:28:75.26:0,75,1998	0/0:25,0:25:60.21:0,60,1611	1/1:23,8:31:39.13:1525,39,0	0/0:24,0:24:54.19:0,54,1450	0/0:17,0:17:51.18:0,51,1353	0/0:11,0:11:27.09:0,27,725	0/0:29,0:29:72.25:0,72,1932	0/0:14,0:14:36.12:0,36,960	0/0:27,0:27:66.23:0,66,1759	0/0:26,0:26:72.25:0,72,1902	1/1:9,12:22:42.14:1734,42,0	0/0:24,0:24:66.23:0,66,1704	0/0:24,0:24:63.22:0,63,1636	0/0:29,0:29:69.24:0,69,1810	0/0:20,0:20:54.19:0,54,1450	0/0:62,0:62:99:0,147,3797	0/0:26,0:26:72.23:0,72,1872	0/0:15,0:15:33.11:0,33,863	0/0:27,0:27:75.21:0,75,1953	0/0:13,0:13:36.12:0,36,967	0/0:26,0:25:75.26:0,75,1988	0/0:21,0:21:54.19:0,54,1450	1/1:0,5:5:15.05:641,15,0
chr10	96309075	.	G	GGGCCAGAGCA	57561.98	PASS	AB=0.972;AC=49;AF=0.875;AN=56;BaseQRankSum=-6.160;DP=664;FS=1.775;HRun=0;HaplotypeScore=180.9457;InbreedingCoeff=0.8054;MQ=77.75;MQ0=0;MQRankSum=-15.163;QD=99.76;ReadPosRankSum=0.632;VQSLOD=5.2480;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,3471	1/1:4,6:10:30.10:1486,30,0	0/0:22,0:22:57.20:0,57,1698	0/0:25,0:25:66.22:0,66,1804	1/1:11,7:20:17.36:928,17,0	1/1:8,15:25:57.20:2891,57,0	1/1:13,13:28:69.15:3260,69,0	1/1:27,4:35:99:4316,105,0	1/1:13,18:35:78.27:3952,78,0	1/1:6,7:17:51.13:2088,51,0	1/1:4,3:7:15.05:733,15,0	1/1:10,18:30:81.28:4064,81,0	1/1:11,10:22:48.16:2513,48,0	1/1:6,14:23:51.17:2535,51,0	1/1:11,20:33:75.26:3886,75,0	0/1:34,1:34:65.07:65,0,2822	1/1:11,12:24:57.20:2640,57,0	1/1:8,8:19:42.14:2025,42,0	1/1:19,5:30:87.28:3128,87,0	1/1:13,7:22:40.29:1665,40,0	1/1:12,8:27:11.84:591,12,0	1/1:9,9:22:36.12:1814,36,0	1/1:4,7:12:27.08:1287,27,0	1/1:12,7:21:38.89:1747,39,0	1/1:8,11:21:45.15:2181,45,0	1/1:9,18:30:90.27:4024,90,0	1/1:6,18:26:63.22:3265,63,0	1/1:0,3:3:9.03:476,9,0
chr10	96309573	.	C	CG	14005.33	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-15.937;DP=642;FS=5.318;HRun=4;HaplotypeScore=57.9017;InbreedingCoeff=0.9986;MQ=89.08;MQ0=0;MQRankSum=-3.165;QD=35.10;ReadPosRankSum=1.909;VQSLOD=5.4859;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:96.32:1312,96,0	0/0:13,0:13:39.11:0,39,442	0/0:29,0:29:79.77:0,80,876	0/0:19,0:19:48.07:0,48,515	0/0:23,0:23:63.18:0,63,714	1/1:1,23:24:63.21:861,63,0	1/1:2,20:22:54.18:738,54,0	1/1:3,25:29:75.16:959,75,0	1/1:2,20:22:60.20:818,60,0	1/1:3,16:19:48.16:657,48,0	1/1:0,25:25:63.21:861,63,0	1/1:0,25:25:60.20:820,60,0	1/1:2,19:21:54.17:726,54,0	1/1:1,22:23:60.20:820,60,0	0/0:21,0:21:57.16:0,57,646	1/1:1,17:17:48.16:656,48,0	1/1:3,40:43:99:1559,114,0	1/1:0,13:13:30.10:410,30,0	0/0:17,0:17:42.12:0,42,475	0/0:22,0:22:57.14:0,57,636	0/0:31,0:31:87.23:0,87,975	1/1:4,26:30:72.20:963,72,0	1/1:2,13:15:39.13:533,39,0	1/1:3,26:29:78.26:1066,78,0	0/0:11,0:11:27.07:0,27,306	0/0:23,0:23:66.14:0,66,726	0/0:34,0:33:96.27:0,96,1088	1/1:0,6:6:18.06:246,18,0
chr10	96309739	.	TGGA	T	7908.77	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.711;DP=619;FS=10.220;HRun=0;HaplotypeScore=95.3790;InbreedingCoeff=0.9935;MQ=83.56;MQ0=0;MQRankSum=-2.926;QD=40.56;ReadPosRankSum=1.408;VQSLOD=6.0214;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:99:0,114,2488	1/1:1,7:8:21.07:343,21,0	0/0:19,0:19:54.15:0,54,944	0/0:27,0:26:72.25:0,72,1490	1/1:1,18:19:42.06:628,42,0	0/0:16,0:16:48.16:0,48,1047	0/0:21,0:21:60.21:0,60,1341	0/0:27,0:27:69.24:0,69,1505	0/0:24,0:24:72.25:0,72,1573	0/0:29,0:29:84.29:0,84,1817	0/0:21,0:21:63.22:0,63,1406	0/0:22,0:22:66.23:0,66,1449	0/0:17,0:17:51.17:0,51,1113	0/0:18,0:18:51.17:0,51,1073	1/1:0,22:22:63.22:1029,63,0	0/0:18,0:18:54.19:0,54,1189	0/0:31,0:31:90.31:0,90,1941	0/0:29,0:29:87.30:0,87,1941	1/1:2,23:25:66.20:1013,66,0	1/1:2,12:14:33.07:510,33,0	1/1:0,28:28:78.22:1245,78,0	0/0:19,0:19:51.17:0,51,1063	0/0:15,0:15:42.14:0,42,937	0/0:14,0:14:39.13:0,39,848	1/1:2,17:19:42.14:686,42,0	1/1:6,24:30:11.20:1133,11,0	1/1:0,30:30:81.28:1323,81,0	0/0:17,0:17:48.16:0,48,1072
chr10	96311310	.	CACAT	C	565.09	PASS	AB=0.879;AC=6;AF=0.111;AN=54;BaseQRankSum=5.590;DP=932;FS=18.210;HRun=0;HaplotypeScore=425.0732;InbreedingCoeff=0.0571;MQ=37.87;MQ0=4;MQRankSum=-6.429;QD=2.78;ReadPosRankSum=-0.747;VQSLOD=0.2441;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:15,3:18:27.56:28,0,478	0/0:23,0:6:16.83:0,17,360	0/0:39,0:11:27.05:0,27,538	0/0:27,10:35:33.16:0,33,812	0/0:28,0:28:6:0,6,70	0/0:13,4:17:7.97:0,8,51	0/1:66,16:80:99:466,0,2431	0/0:26,0:26:11.26:0,11,107	0/1:44,8:51:99:142,0,1158	0/0:39,0:39:29.96:0,30,329	0/0:38,0:38:8.84:0,9,82	0/0:34,0:34:8.98:0,9,93	0/0:33,0:33:8.26:0,8,91	0/0:53,17:70:20.51:0,21,619	1/1:8,3:29:1.21:35,1,0	0/0:16,0:16:9.28:0,9,272	0/0:21,1:22:19.75:0,20,345	0/1:21,1:22:9.87:10,0,634	0/0:29,5:32:43.06:0,43,1106	0/0:36,1:37:26.01:0,26,517	0/0:26,10:36:15.45:0,15,116	0/0:40,10:50:45.40:0,45,419	0/0:16,2:18:15.43:0,15,141	0/0:17,2:19:30.20:0,30,766	0/0:34,9:42:13.42:0,13,1651	0/0:34,7:41:47.08:0,47,1118	0/0:18,0:18:9.03:0,9,197
chr10	96311316	.	T	TAC	354.22	PASS	AB=0.995;AC=19;AF=0.352;AN=54;BaseQRankSum=5.921;DP=837;FS=24.918;HRun=0;HaplotypeScore=390.3776;InbreedingCoeff=0.0793;MQ=36.87;MQ0=3;MQRankSum=-3.765;QD=0.77;ReadPosRankSum=2.036;VQSLOD=0.4738;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:18,0:18:7.93:0,8,202	0/0:16,0:5:8.23:0,8,157	0/0:27,0:8:17.42:0,17,217	0/0:34,0:32:26.09:0,26,310	0/0:27,0:27:2.89:0,3,17	1/1:16,0:16:1.97:7,2,0	0/1:67,0:65:99:206,0,395	1/1:25,0:25:0.80:3,1,0	0/1:46,0:45:64.23:64,0,203	1/1:32,0:32:2.51:7,3,0	0/1:34,0:34:0:0,0,0	0/1:34,0:34:0:0,0,0	0/0:31,0:31:2.83:0,3,17	0/0:69,0:69:13.83:0,14,219	1/1:18,4:22:0.51:31,1,0	0/1:15,0:15:24.46:24,0,52	0/1:20,0:21:20.77:21,0,57	0/0:19,0:19:2.12:0,2,390	0/0:33,0:31:38.13:0,38,530	0/1:31,0:31:2.91:3,0,155	1/1:33,0:33:0.94:3,1,0	0/1:44,0:44:7.95:8,0,31	0/0:16,0:17:0.05:0,0,1	0/0:19,0:19:26.74:0,27,326	0/1:40,0:39:99:103,0,688	0/0:40,0:40:6.42:0,6,475	0/0:18,0:18:9.03:0,9,121
chr10	96311318	.	CAT	C	977.30	PASS	AB=0.867;AC=12;AF=0.214;AN=56;BaseQRankSum=5.403;DP=815;FS=25.338;HRun=0;HaplotypeScore=382.2817;InbreedingCoeff=-0.0916;MQ=36.53;MQ0=2;MQRankSum=-6.848;QD=3.16;ReadPosRankSum=2.307;VQSLOD=0.8640;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:6,2:8:0:0,0,0	0/1:14,3:17:12.64:13,0,257	0/0:14,0:5:14.86:0,15,197	0/0:26,0:8:17.38:0,17,246	0/0:22,10:30:24.35:0,24,411	0/0:27,0:27:3:0,3,25	1/1:12,4:16:1.25:4,1,0	0/1:48,16:62:99:314,0,883	0/0:26,0:26:4.11:0,4,45	0/1:37,8:44:99:450,0,170	0/1:32,0:32:7.12:7,0,40	0/0:34,0:34:0:0,0,0	0/0:33,0:33:2.94:0,3,18	0/0:31,0:31:5.68:0,6,48	0/0:46,17:63:13.18:0,13,293	0/0:18,3:21:1.68:0,2,6	0/1:13,2:15:34.73:35,0,58	0/1:15,6:21:72.78:239,0,73	0/1:17,1:18:33.04:33,0,393	0/0:28,5:31:39.91:0,40,731	0/1:27,2:29:0.75:1,0,182	0/0:22,10:32:2.69:0,3,25	0/1:35,9:44:4.56:5,0,140	0/0:13,4:17:5.93:0,6,49	0/0:17,2:19:27.50:0,27,387	0/0:31,9:39:8.10:0,8,931	0/0:33,7:40:27.27:0,27,716	0/0:18,0:18:8.94:0,9,66
chr10	96311320	.	TAC	T	1237.49	PASS	AB=0.803;AC=19;AF=0.365;AN=52;BaseQRankSum=1.318;DP=778;FS=13.187;HRun=0;HaplotypeScore=370.4227;InbreedingCoeff=0.2321;MQ=34.68;MQ0=1;MQRankSum=-3.215;QD=2.81;ReadPosRankSum=-0.903;VQSLOD=0.8745;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:16,0:16:1.85:2,0,165	0/0:11,0:4:9.02:0,9,132	0/0:23,0:8:12.01:0,12,174	0/0:32,0:30:18.36:0,18,319	0/1:1,25:26:0:0,0,0	1/1:10,6:16:6.70:37,7,0	0/1:51,0:60:99:155,0,418	1/1:4,21:25:2.69:13,3,0	0/1:19,21:39:92.42:876,0,92	1/1:5,25:30:2.88:41,3,0	0/0:2,32:34:0:0,0,0	0/1:1,31:32:0:0,0,0	0/1:5,25:30:0.03:0,0,0	0/0:60,0:60:13.18:0,13,259	0/0:21,0:21:2.80:0,3,8	0/1:7,0:15:7.13:7,0,19	0/1:14,0:20:26.38:105,0,26	0/0:18,0:18:2.27:0,2,306	0/0:33,0:31:36.93:0,37,625	0/0:28,0:28:9.90:0,10,142	0/1:12,20:32:0.31:0,0,1	1/1:24,18:42:10.39:125,10,0	0/1:14,0:15:0.01:0,0,1	0/0:15,0:15:15.52:0,16,261	0/0:38,0:37:48.86:0,49,967	0/1:39,0:39:8.05:8,0,655	./.
chr10	96311323	.	A	ACT	322.35	PASS	AB=0.990;AC=13;AF=0.250;AN=52;BaseQRankSum=3.042;DP=731;FS=2.224;HRun=0;HaplotypeScore=358.7152;InbreedingCoeff=0.0109;MQ=33.91;MQ0=0;MQRankSum=-2.622;QD=0.93;ReadPosRankSum=-0.650;VQSLOD=1.5363;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:16,0:16:4.05:0,4,147	0/0:11,0:4:12.01:0,12,153	0/0:15,0:6:12.02:0,12,161	0/0:31,0:29:20.38:0,20,256	0/1:25,1:26:0:0,0,0	0/0:14,0:14:3.85:0,4,23	0/1:59,0:58:99:304,0,197	0/1:24,0:24:0.27:0,0,0	0/1:37,0:37:6.44:6,0,354	0/0:28,0:28:2.54:0,3,12	0/1:33,0:33:0:0,0,0	0/0:32,0:32:2.70:0,3,20	0/0:27,0:27:0:0,0,0	0/0:60,0:60:16.03:0,16,236	0/0:21,0:21:3.40:0,3,21	0/1:14,0:14:16.89:35,0,17	0/1:18,0:18:3.34:3,0,68	0/1:18,0:18:47.14:47,0,268	0/0:32,0:30:35.51:0,36,519	0/0:23,1:24:7.96:0,8,137	1/1:31,0:31:0.34:1,0,0	0/0:37,1:38:16.02:0,16,111	0/1:11,0:11:0.01:0,0,0	0/0:14,0:14:15.05:0,15,222	0/1:34,2:35:25.59:26,0,714	0/1:39,0:39:9.56:10,0,472	./.
chr10	96311503	.	AAG	A	649.17	PASS	AB=0.871;AC=8;AF=0.143;AN=56;BaseQRankSum=14.998;DP=1369;FS=49.974;HRun=0;HaplotypeScore=525.4449;InbreedingCoeff=0.0151;MQ=44.14;MQ0=5;MQRankSum=-10.194;QD=1.80;ReadPosRankSum=3.142;VQSLOD=-0.4142;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,3:16:1.48:17,1,0	0/0:21,6:27:56.10:0,56,988	0/0:46,1:21:63.21:0,63,1155	0/0:35,4:14:35.28:0,35,603	0/0:47,5:51:99:0,110,2115	0/0:30,9:39:36.76:0,37,634	0/1:14,4:18:4.12:4,0,354	0/0:56,0:47:51.83:0,52,2057	0/0:58,11:69:42.36:0,42,1593	0/1:91,21:113:99:445,0,4556	0/0:32,7:39:83.64:0,84,1505	0/0:48,4:53:64.27:0,64,1064	0/1:42,10:53:22.17:22,0,866	0/0:40,5:45:16.79:0,17,966	0/0:79,11:90:54.04:0,54,1560	0/1:38,7:45:27.22:187,0,27	0/0:24,4:28:54.08:0,54,1012	0/1:38,3:40:69.50:69,0,1729	0/0:20,1:21:35.32:0,35,1162	0/0:68,7:74:99:0,185,3268	0/0:65,3:67:99:0,133,2627	0/0:48,10:58:98.31:0,98,1984	0/0:38,11:49:98.04:0,98,1900	0/0:29,11:40:41.58:0,42,853	0/0:34,1:33:88.23:0,88,1483	0/1:69,6:74:31.23:31,0,3362	0/0:46,6:53:1.82:0,2,1410	0/0:23,1:24:33.12:0,33,1032
chr10	96311542	.	C	CAT	398.06	PASS	AB=0.600;AC=3;AF=0.054;AN=56;BaseQRankSum=-0.887;DP=1322;FS=1.105;HRun=0;HaplotypeScore=409.4549;InbreedingCoeff=0.6164;MQ=45.67;MQ0=12;MQRankSum=1.820;QD=6.03;ReadPosRankSum=-2.037;VQSLOD=1.7234;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,16:27:9.03:153,9,0	0/0:22,0:24:42.53:0,43,472	0/0:24,0:9:11.99:0,12,126	0/0:26,0:10:20.69:0,21,211	0/0:63,0:62:98.03:0,98,1489	0/0:46,0:46:27.06:0,27,327	0/0:24,0:24:32.56:0,33,384	0/0:44,0:42:99:0,100,1142	0/0:70,0:72:72.67:0,73,902	0/0:111,0:112:99:0,309,3648	0/0:47,0:49:96.26:0,96,1202	0/0:54,0:54:56.86:0,57,699	0/0:58,0:58:53.76:0,54,624	0/0:36,0:36:33.07:0,33,413	0/0:69,0:73:71.98:0,72,872	0/1:13,24:38:10.62:342,0,11	0/0:27,0:26:36.06:0,36,447	0/0:29,0:29:61.69:0,62,748	0/0:21,0:16:36.12:0,36,467	0/0:69,0:71:99:0,117,1457	0/0:65,0:65:99:0,129,1661	0/0:60,0:62:99:0,108,1345	0/0:53,0:55:99:0,108,1328	0/0:42,0:41:42.07:0,42,485	0/0:33,0:32:60.16:0,60,747	0/0:65,0:67:99:0,162,1878	0/0:52,0:51:77.59:0,78,960	0/0:20,0:21:39.56:0,40,488
chr10	96311580	.	TAC	T	155.49	PASS	AB=0.889;AC=3;AF=0.054;AN=56;BaseQRankSum=5.494;DP=1318;FS=0.975;HRun=0;HaplotypeScore=310.1746;InbreedingCoeff=0.4644;MQ=44.73;MQ0=37;MQRankSum=-3.702;QD=4.71;ReadPosRankSum=-3.642;VQSLOD=2.0370;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:33:24.08:0,24,415	0/0:22,0:22:27.09:0,27,467	0/0:40,0:13:33.05:0,33,511	0/0:44,0:15:35.94:0,36,563	0/0:56,0:53:96.33:0,96,1657	0/0:39,0:39:21.07:0,21,349	0/0:38,0:38:59.80:0,60,1006	0/0:69,1:59:99:0,126,2113	0/0:70,0:70:61.61:0,62,1053	0/0:114,0:109:99:0,273,4717	0/0:44,0:44:72.22:0,72,1172	0/0:46,0:47:41.78:0,42,695	0/0:41,0:41:44.73:0,45,734	0/0:38,0:38:41.66:0,42,691	0/0:52,0:51:69.21:0,69,1149	0/0:48,0:47:24.37:0,24,853	1/1:17,0:16:2.76:59,3,0	0/1:14,2:15:24.40:188,0,24	0/0:24,0:13:33.11:0,33,559	0/0:61,1:61:94.21:0,94,1516	0/0:76,0:74:99:0,184,2982	0/0:56,0:56:99:0,105,1780	0/0:53,0:53:90.29:0,90,1516	0/0:34,0:34:50.38:0,50,873	0/0:41,5:45:47.36:0,47,754	0/0:74,0:73:99:0,139,2886	0/0:48,0:47:77.97:0,78,1286	0/0:15,0:15:22:0,22,408
chr10	96311596	.	TATAC	T	295.26	PASS	AB=0.826;AC=4;AF=0.071;AN=56;BaseQRankSum=8.622;DP=1335;FS=11.442;HRun=0;HaplotypeScore=333.0497;InbreedingCoeff=0.3990;MQ=45.08;MQ0=51;MQRankSum=-3.268;QD=3.56;ReadPosRankSum=-3.197;VQSLOD=0.7053;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,5:42:10.74:0,11,792	0/0:24,0:24:29.70:0,30,660	0/0:45,0:12:29.13:0,29,571	0/0:43,0:12:8.58:0,9,432	0/0:55,0:50:99:0,99,2245	0/0:33,0:33:14.76:0,15,345	0/0:35,0:36:65.95:0,66,1705	0/0:59,0:43:99:0,99,1829	0/0:60,0:60:62.06:0,62,1526	0/0:109,0:103:99:0,227,6493	0/0:40,0:40:57.18:0,57,1423	0/0:50,0:51:63.06:0,63,1522	0/0:43,0:43:53.97:0,54,1367	0/0:36,0:36:54.10:0,54,1463	0/0:64,1:62:99:0,108,2556	0/1:58,0:57:99:106,0,1672	1/1:9,1:9:11.12:117,11,0	0/1:7,8:15:46.42:182,0,46	0/0:23,0:13:39.13:0,39,980	0/0:57,0:55:99:0,100,2319	0/0:85,1:78:99:0,145,4637	0/0:57,0:56:93.18:0,93,2333	0/0:57,0:57:96.27:0,96,2329	0/0:33,0:33:52.79:0,53,1305	0/0:47,0:46:38.50:0,39,1073	0/0:80,0:79:99:0,169,4648	0/0:54,0:52:99:0,99,2314	0/0:14,0:14:16.88:0,17,280
chr10	96311600	.	C	CAT	356.34	PASS	AB=0.941;AC=4;AF=0.071;AN=56;BaseQRankSum=8.931;DP=1350;FS=16.620;HRun=0;HaplotypeScore=300.2315;InbreedingCoeff=0.4335;MQ=44.94;MQ0=50;MQRankSum=-2.477;QD=4.14;ReadPosRankSum=-2.791;VQSLOD=0.8708;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:43:13.13:0,13,456	0/0:24,0:24:29.88:0,30,248	0/0:45,0:10:27:0,27,343	0/0:42,0:10:24.05:0,24,312	0/0:48,0:44:83.60:0,84,721	0/0:31,0:31:15.02:0,15,206	0/0:38,0:38:71.70:0,72,1025	0/0:57,0:39:50.20:0,50,988	0/0:65,0:65:71.66:0,72,958	0/0:107,0:101:99:0,209,3679	0/0:38,0:39:54.15:0,54,780	0/0:52,0:53:65.83:0,66,931	0/0:46,0:46:57.10:0,57,818	0/0:37,0:36:53.92:0,54,826	0/0:71,0:67:66.33:0,66,812	0/1:62,0:61:6.73:7,0,984	1/1:6,2:8:9.94:193,10,0	0/1:13,2:15:19.46:260,0,19	0/0:24,0:15:38.52:0,39,406	0/0:59,0:55:88.86:0,89,674	0/0:93,0:85:99:0,122,1533	0/0:61,0:60:90.15:0,90,1287	0/0:53,0:53:87.15:0,87,1261	0/0:34,0:34:40.97:0,41,722	0/0:46,0:45:43.90:0,44,387	0/0:81,0:80:99:0,108,1510	0/0:52,0:50:41.53:0,42,611	0/0:10,0:10:11.99:0,12,153
chr10	96311608	.	T	TAC	12883.33	PASS	AB=0.774;AC=15;AF=0.268;AN=56;BaseQRankSum=-15.582;DP=1374;FS=8.455;HRun=0;HaplotypeScore=254.5827;InbreedingCoeff=0.3792;MQ=45.84;MQ0=55;MQRankSum=6.231;QD=21.65;ReadPosRankSum=2.068;VQSLOD=3.7238;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:41:29.46:0,29,359	1/1:3,20:25:20.70:357,21,0	0/0:46,0:7:8.76:0,9,90	0/0:40,0:7:1.81:0,2,105	1/1:19,27:43:75.22:1199,75,0	0/0:30,0:31:12.51:0,13,156	0/0:37,0:37:63.03:0,63,815	0/1:47,0:31:13.69:14,0,150	0/0:67,0:67:72.67:0,73,899	0/0:93,0:101:99:0,216,2931	0/0:35,0:37:45.15:0,45,584	0/0:50,0:50:66.20:0,66,839	0/0:47,0:48:69.12:0,69,861	0/0:35,0:34:48.15:0,48,624	0/1:38,44:78:82.36:1913,0,82	0/0:68,0:67:90.26:0,90,1122	0/0:11,0:11:16.78:0,17,167	0/0:15,0:15:20.69:0,21,151	0/1:18,9:20:64.90:592,0,65	1/1:28,31:55:80.26:1644,80,0	0/1:49,53:93:99:2520,0,135	0/0:53,0:53:75.16:0,75,974	0/0:45,0:53:75.15:0,75,974	0/0:35,0:35:47.47:0,47,656	0/1:10,19:44:42.87:520,0,43	0/1:33,48:86:99:2704,0,161	1/1:11,43:53:16.53:1384,17,0	0/1:9,0:10:0.21:36,0,0
chr10	96311638	.	CACACAT	C	721.66	PASS	AB=0.949;AC=5;AF=0.089;AN=56;BaseQRankSum=8.647;DP=1237;FS=2.797;HRun=0;HaplotypeScore=340.2834;InbreedingCoeff=0.2168;MQ=45.53;MQ0=39;MQRankSum=-7.706;QD=3.57;ReadPosRankSum=-1.083;VQSLOD=1.1291;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:40:36.12:0,36,1243	0/0:19,0:19:15.05:0,15,529	0/0:49,0:12:35.15:0,35,1097	0/0:49,0:12:29.84:0,30,894	0/0:33,0:30:47.99:0,48,1633	0/0:25,0:25:17.81:0,18,600	0/0:32,0:32:66.12:0,66,2097	0/0:29,0:12:26.26:0,26,622	0/0:54,0:54:69.38:0,69,2312	0/1:86,12:93:99:588,0,6236	0/0:33,0:33:29.69:0,30,1056	0/0:43,0:42:65.06:0,65,2247	0/0:37,0:37:60.13:0,60,2041	0/0:32,0:31:60.21:0,60,1826	0/0:77,0:73:99:0,169,5778	0/0:67,0:66:84.28:0,84,2871	0/1:13,0:12:25.60:26,0,905	0/0:16,0:15:42.14:0,42,1287	0/0:22,0:20:60.15:0,60,1896	0/0:53,1:45:52.54:0,53,2880	0/0:105,0:96:99:0,217,7039	0/0:43,1:41:51.18:0,51,1735	0/0:45,2:47:51.17:0,51,1667	0/0:35,0:35:41.84:0,42,1287	0/0:39,9:46:37.67:0,38,1215	0/1:83,4:82:99:165,0,6533	0/0:42,0:41:82.23:0,82,2633	1/1:4,0:3:3.01:55,3,0
chr10	96311641	.	A	ACT	134.73	PASS	AB=0.965;AC=5;AF=0.089;AN=56;BaseQRankSum=8.100;DP=1201;FS=5.866;HRun=0;HaplotypeScore=281.7114;InbreedingCoeff=0.2367;MQ=45.56;MQ0=38;MQRankSum=-6.891;QD=0.68;ReadPosRankSum=-1.860;VQSLOD=1.3453;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:38:35.86:0,36,550	0/0:19,0:19:15:0,15,230	0/0:50,0:12:33.11:0,33,487	0/0:47,0:11:30.10:0,30,444	0/0:33,0:29:48.16:0,48,734	0/0:21,0:21:18.53:0,19,277	0/0:31,0:31:65.85:0,66,983	0/0:26,0:12:25.26:0,25,341	0/0:53,0:53:72.67:0,73,1075	0/1:92,2:89:99:154,0,2839	0/0:30,1:31:33.09:0,33,482	0/0:42,0:41:65.97:0,66,989	0/0:35,0:35:59.91:0,60,906	0/0:32,0:31:60.12:0,60,877	0/0:78,0:74:99:0,168,2569	0/0:66,0:65:84.29:0,84,1285	0/1:14,1:14:27.35:27,0,382	0/0:16,0:15:42.09:0,42,613	0/0:22,0:20:60.15:0,60,871	0/0:53,0:44:51.70:0,52,1292	0/0:101,0:92:99:0,217,3246	0/0:40,0:37:51.17:0,51,780	0/0:43,2:45:51.17:0,51,780	0/0:34,0:34:38.52:0,39,609	0/0:44,3:45:36.98:0,37,553	0/1:84,2:81:5.07:5,0,2859	0/0:40,0:39:82.06:0,82,1233	1/1:2,1:2:3.01:55,3,0
chr10	96311672	.	T	TGA	132.94	PASS	AB=0.806;AC=2;AF=0.036;AN=56;BaseQRankSum=7.519;DP=851;FS=4.774;HRun=0;HaplotypeScore=175.2284;InbreedingCoeff=0.0340;MQ=43.12;MQ0=45;MQRankSum=-6.905;QD=1.62;ReadPosRankSum=-3.906;VQSLOD=1.6862;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:23.84:0,24,379	0/0:11,0:11:8.99:0,9,141	0/0:27,0:5:12.04:0,12,183	0/0:30,0:8:24.03:0,24,306	0/0:19,0:16:27.09:0,27,441	0/0:16,0:16:9.23:0,9,192	0/0:24,0:23:45.94:0,46,697	0/0:36,0:10:18.06:0,18,275	0/0:30,0:30:48.63:0,49,774	0/1:49,8:51:99:183,0,1721	0/0:16,0:16:18.06:0,18,294	0/0:29,0:27:55.41:0,55,849	0/0:24,0:24:39.13:0,39,619	0/0:19,0:18:42.14:0,42,662	0/0:66,0:61:99:0,138,2246	0/0:48,0:46:51.16:0,51,808	0/0:14,0:13:24.08:0,24,392	0/0:13,0:12:33.11:0,33,508	0/0:18,0:14:39.13:0,39,636	0/0:33,1:25:10.67:0,11,841	0/0:84,0:69:99:0,150,2383	0/0:27,1:26:25.24:0,25,424	0/0:25,2:27:33.11:0,33,523	0/0:26,0:25:20.99:0,21,335	0/1:16,9:24:38.91:39,0,261	0/0:64,2:54:72.88:0,73,2278	0/0:26,0:23:51.09:0,51,806	0/0:3,0:2:2.04:0,2,6
chr10	96311704	.	C	CTCATACAG	9181.83	PASS	AB=0.991;AC=47;AF=0.839;AN=56;BaseQRankSum=-3.884;DP=678;FS=1.787;HRun=0;HaplotypeScore=148.9160;InbreedingCoeff=0.1950;MQ=38.81;MQ0=67;MQRankSum=7.300;QD=15.59;ReadPosRankSum=0.189;VQSLOD=3.9155;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,1:20:2.90:47,3,0	1/1:8,0:7:6.01:75,6,0	0/0:46,0:1:3:0,3,26	0/0:43,0:9:24.02:0,24,305	1/1:21,1:19:30.04:472,30,0	1/1:20,0:20:3.75:188,4,0	1/1:16,0:13:12.63:379,13,0	0/1:28,0:8:32.09:32,0,42	1/1:27,0:26:44.55:511,45,0	1/1:37,0:34:32.58:1087,33,0	1/1:17,0:16:18:283,18,0	1/1:22,0:19:23.89:299,24,0	1/1:13,0:13:4.77:68,5,0	1/1:18,0:17:11.96:213,12,0	1/1:44,8:47:99:1298,102,0	1/1:29,1:28:11.43:100,11,0	0/1:15,0:14:2.41:147,0,2	0/1:11,0:10:8.03:244,0,8	1/1:23,1:9:5.99:307,6,0	1/1:19,0:17:25.69:291,26,0	1/1:48,3:38:80.97:892,81,0	1/1:13,0:12:5.98:47,6,0	1/1:18,0:18:4.26:132,4,0	1/1:16,1:16:11.83:145,12,0	1/1:19,0:17:10.96:136,11,0	0/1:40,2:31:6.49:1366,0,6	1/1:18,1:17:35.87:361,36,0	0/1:10,0:9:5.73:61,0,6
chr10	96311744	.	TATACACACACATACACAC	T	2823.48	PASS	AB=0.890;AC=11;AF=0.196;AN=56;BaseQRankSum=-2.519;DP=1111;FS=24.379;HRun=0;HaplotypeScore=435.4983;InbreedingCoeff=-0.0912;MQ=43.67;MQ0=42;MQRankSum=-1.474;QD=7.65;ReadPosRankSum=-3.448;VQSLOD=0.4755;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:6.54:0,7,198	0/0:22,0:21:54.02:0,54,2403	0/0:42,0:12:17.22:0,17,317	0/0:45,0:15:10.34:0,10,312	0/0:38,0:35:66.23:0,66,2708	0/0:19,4:23:23.85:0,24,706	0/1:24,0:23:24.08:24,0,1006	0/0:72,0:37:90.28:0,90,2727	0/1:55,11:60:99:256,0,2135	0/1:55,6:58:99:1774,0,2796	0/1:21,5:26:97.60:98,0,381	0/1:38,8:43:99:387,0,1552	0/1:30,7:34:99:260,0,1145	0/1:36,4:36:17.85:18,0,1471	0/0:83,0:79:99:0,223,10145	0/0:45,0:44:56.72:0,57,1757	0/0:24,0:24:46.22:0,46,1525	0/0:26,0:26:71.93:0,72,2147	0/0:25,0:15:45.10:0,45,1699	0/0:30,0:31:33.11:0,33,1393	0/0:91,0:78:99:0,180,7445	1/1:11,3:14:3.01:57,3,0	0/1:22,3:24:55.89:56,0,366	0/1:27,1:28:40.84:41,0,805	0/0:27,0:25:32.91:0,33,1259	0/0:51,0:47:99:0,132,4928	0/0:45,0:43:99:0,114,4356	0/0:17,0:17:36.06:0,36,951
chr10	96311832	.	TATACACACAC	T	5528.12	PASS	AB=0.997;AC=31;AF=0.554;AN=56;BaseQRankSum=-0.511;DP=1014;FS=40.249;HRun=0;HaplotypeScore=288.1158;InbreedingCoeff=0.1338;MQ=46.22;MQ0=59;MQRankSum=-0.958;QD=8.24;ReadPosRankSum=-5.898;VQSLOD=1.4241;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:2.84:0,3,14	0/1:22,0:21:99:226,0,892	0/0:41,0:7:21.07:0,21,527	0/0:53,0:7:18.04:0,18,359	0/1:53,0:52:65.44:65,0,3705	1/1:17,0:15:11.77:271,12,0	1/1:14,0:14:3.01:51,3,0	0/0:20,0:4:5.93:0,6,40	0/1:43,0:41:64.53:183,0,65	1/1:40,1:36:62.16:1378,62,0	1/1:23,2:23:20.94:374,21,0	1/1:39,1:40:1:300,1,0	0/1:24,1:25:32.44:268,0,32	1/1:21,1:19:14.21:195,14,0	0/0:88,1:87:99:0,151,4732	0/1:37,0:35:8.99:9,0,24	0/1:18,0:17:0.30:0,0,13	1/1:10,0:10:2.44:138,2,0	0/1:27,0:19:99:144,0,960	0/1:55,0:55:99:259,0,3230	0/1:102,0:98:99:195,0,6255	1/1:24,4:26:42.14:1077,42,0	1/1:16,1:17:15.89:296,16,0	1/1:28,1:27:3.01:49,3,0	0/1:40,0:40:11.37:11,0,2851	0/0:73,0:68:55.26:0,55,5128	0/0:45,0:45:78.25:0,78,2854	0/1:6,0:6:1.64:37,0,2
chr10	96311838	.	C	CACACAT	691.35	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=8.968;DP=1036;FS=55.656;HRun=0;HaplotypeScore=262.1257;InbreedingCoeff=-0.0102;MQ=46.15;MQ0=53;MQRankSum=-1.207;QD=2.17;ReadPosRankSum=-5.720;VQSLOD=-0.7143;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,1:23:3.01:48,3,0	0/1:21,0:21:23.35:23,0,495	0/0:48,0:8:21.04:0,21,341	0/0:57,0:8:21.06:0,21,338	0/0:57,0:56:46.16:0,46,2024	0/1:18,0:16:7.63:8,0,9	0/0:12,0:11:6:0,6,55	0/0:23,0:5:2.97:0,3,20	0/0:37,0:36:13.09:0,13,134	0/1:49,0:43:99:137,0,232	0/1:26,0:24:54.83:80,0,55	0/0:31,0:31:16.30:0,16,171	0/0:28,0:28:29.40:0,29,188	0/0:21,0:20:3.57:0,4,98	0/0:87,0:85:99:0,138,2651	1/1:33,3:33:11.90:187,12,0	0/1:15,0:15:7.55:8,0,10	0/1:9,0:9:28.39:28,0,32	0/0:29,0:20:14.39:0,14,550	0/1:57,0:57:5.93:6,0,1657	0/0:96,0:92:96.50:0,96,3545	0/1:36,0:34:50.27:238,0,50	0/1:21,0:21:32.96:33,0,88	0/0:32,0:30:8.63:0,9,60	0/0:38,0:38:45.96:0,46,1581	0/0:78,0:74:99:0,116,2793	0/0:43,0:43:78.22:0,78,1547	0/1:6,0:6:20.95:48,0,21
chr10	96311857	.	ACT	A	57.03	PASS	AB=0.971;AC=8;AF=0.148;AN=54;BaseQRankSum=6.086;DP=965;FS=51.963;HRun=0;HaplotypeScore=190.6638;InbreedingCoeff=0.0784;MQ=47.08;MQ0=99;MQRankSum=-0.481;QD=0.48;ReadPosRankSum=-4.421;VQSLOD=-0.5008;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:18,0:18:39.12:0,39,674	0/0:65,0:7:20.97:0,21,290	0/0:61,0:8:14.22:0,14,292	0/0:51,0:48:99:0,132,2445	0/1:17,1:16:74.07:74,0,341	0/0:15,0:13:23.58:0,24,386	0/0:34,2:18:16.51:0,17,596	0/0:27,1:28:32.73:0,33,564	0/0:56,0:51:47.54:0,48,2283	0/0:22,1:21:4.28:0,4,710	0/1:26,2:26:30.81:31,0,270	0/0:17,0:16:22.20:0,22,363	0/1:16,1:15:7.20:7,0,394	0/0:81,0:78:99:0,144,2688	1/1:19,0:18:5.32:46,5,0	0/1:14,0:13:0.48:0,0,43	0/0:7,0:7:5.55:0,6,220	0/0:19,0:15:45.14:0,45,810	0/0:54,0:54:99:0,135,2434	0/0:95,1:91:99:0,235,4295	0/0:40,0:35:76.50:0,76,1323	0/1:18,0:17:9.18:9,0,526	0/0:24,1:20:30:0,30,465	0/0:35,0:34:84.29:0,84,1592	0/0:75,0:70:99:0,208,3887	0/0:29,0:29:69.03:0,69,1291	0/1:4,0:4:9.27:9,0,67
chr10	96311903	.	TCATATACA	T	1056.52	PASS	AB=0.833;AC=8;AF=0.143;AN=56;BaseQRankSum=1.544;DP=967;FS=5.780;HRun=0;HaplotypeScore=264.3976;InbreedingCoeff=0.6884;MQ=47.80;MQ0=54;MQRankSum=-5.603;QD=16.51;ReadPosRankSum=-2.372;VQSLOD=1.9789;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:0.30:0,0,0	0/0:18,0:18:33.10:0,33,1064	0/0:51,0:9:14.69:0,15,168	0/0:56,0:2:3.01:0,3,39	0/0:34,0:29:81.72:0,82,2687	0/0:22,0:20:31.90:0,32,1104	0/0:33,0:30:35.75:0,36,1158	1/1:29,2:19:29.96:399,30,0	0/0:47,0:45:61.48:0,61,2135	0/0:76,0:70:99:0,205,6593	0/0:18,0:17:42.14:0,42,1597	0/0:32,0:29:34.97:0,35,1133	0/0:29,0:27:40.76:0,41,1023	0/0:29,0:26:37.07:0,37,1540	0/0:69,0:65:85.45:0,85,3368	0/0:14,0:13:5.23:0,5,42	1/1:3,6:9:11.79:262,12,0	0/1:4,4:8:48.41:378,0,48	0/0:32,0:19:50.72:0,51,1438	0/0:47,0:45:99:0,123,4159	0/0:80,0:72:99:0,172,5764	0/0:48,0:39:99:0,105,3387	0/0:21,0:20:48.16:0,48,1741	0/0:39,0:32:40.27:0,40,1157	0/0:23,0:22:48.12:0,48,1412	0/0:55,0:52:99:0,135,4248	0/0:30,0:26:47.77:0,48,1119	1/1:1,2:3:6.02:154,6,0
chr10	96311932	.	T	TAC	16686.71	PASS	AB=0.784;AC=47;AF=0.839;AN=56;BaseQRankSum=-7.595;DP=924;FS=16.579;HRun=0;HaplotypeScore=174.3130;InbreedingCoeff=0.5220;MQ=49.30;MQ0=50;MQRankSum=7.237;QD=20.63;ReadPosRankSum=3.704;VQSLOD=3.7632;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:0.56:3,1,0	1/1:2,12:14:14.84:259,15,0	0/0:55,0:14:23.99:0,24,278	0/0:51,0:15:36.57:0,37,453	1/1:15,17:27:57.06:927,57,0	1/1:11,14:24:17.11:533,17,0	1/1:7,23:29:6.02:104,6,0	0/0:9,0:4:5.79:0,6,37	1/1:5,47:50:45.15:778,45,0	1/1:32,25:54:97.68:1568,98,0	1/1:14,5:19:2.96:607,3,0	1/1:3,40:42:30.10:520,30,0	1/1:3,31:32:29.90:518,30,0	1/1:4,32:34:33.11:571,33,0	1/1:5,63:66:99:1693,99,0	0/1:18,0:17:10:10,0,29	1/1:8,0:8:6.62:27,7,0	1/1:8,0:8:12.06:132,12,0	0/1:13,8:13:15.51:361,0,16	1/1:15,28:41:96.07:1563,96,0	1/1:35,44:73:85.40:1729,85,0	1/1:16,21:32:60.32:989,60,0	1/1:8,15:22:60.17:973,60,0	0/1:16,23:34:0.25:262,0,0	1/1:2,17:19:33.11:571,33,0	1/1:31,20:46:81.24:1365,81,0	1/1:2,22:20:33.11:571,33,0	1/1:8,0:8:6.38:52,6,0
chr10	96311939	.	ATACACT	A	608.75	PASS	AB=0.971;AC=16;AF=0.286;AN=56;BaseQRankSum=-1.280;DP=843;FS=3.397;HRun=0;HaplotypeScore=247.5911;InbreedingCoeff=0.0966;MQ=50.03;MQ0=47;MQRankSum=1.205;QD=1.93;ReadPosRankSum=-9.399;VQSLOD=0.1730;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:3.68:17,4,0	0/0:14,0:14:16.67:0,17,470	0/0:64,0:17:38.90:0,39,749	0/0:50,0:17:30.42:0,30,1093	0/1:27,0:22:16.95:17,0,1175	0/1:26,0:24:37.75:38,0,603	0/0:25,0:25:11.94:0,12,320	0/0:4,0:2:6.02:0,6,119	0/0:51,0:48:38.48:0,38,906	0/1:40,0:38:61.33:61,0,1934	0/1:18,0:18:37.47:37,0,736	0/0:46,0:44:44.04:0,44,868	0/0:32,0:30:34.90:0,35,766	0/0:33,0:32:34.37:0,34,700	0/0:65,0:62:97.43:0,97,2380	0/1:17,0:17:22.12:38,0,22	1/1:8,0:8:8.77:51,9,0	0/1:3,2:5:0.98:178,0,1	0/1:18,0:12:13.60:14,0,627	0/0:37,0:35:15.82:0,16,1928	0/1:71,0:66:99:130,0,1685	0/0:30,0:23:9.28:0,9,1180	0/1:22,0:21:17.86:18,0,1067	0/0:34,0:29:24.37:0,24,383	0/0:20,0:19:36.12:0,36,958	0/1:39,0:34:78.02:78,0,2019	0/0:22,0:18:39.03:0,39,869	1/1:6,2:8:9.02:97,9,0
chr10	96311942	.	CACTCAT	C	257.08	PASS	AB=0.965;AC=7;AF=0.125;AN=56;BaseQRankSum=4.453;DP=816;FS=1.638;HRun=0;HaplotypeScore=245.3296;InbreedingCoeff=0.3767;MQ=49.72;MQ0=43;MQRankSum=-2.769;QD=4.76;ReadPosRankSum=-6.884;VQSLOD=0.8586;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,2:16:3.81:50,4,0	0/0:13,0:13:22.32:0,22,656	0/0:69,0:18:27:0,27,671	0/0:48,0:18:33.43:0,33,900	0/0:26,0:21:52.05:0,52,1776	0/0:23,0:21:35.54:0,36,922	0/0:25,0:25:11.94:0,12,411	0/0:3,0:2:5.99:0,6,83	0/0:49,0:46:53.32:0,53,1476	0/0:37,0:35:84.43:0,84,2989	0/0:15,0:15:41.56:0,42,1185	0/0:44,0:42:44.50:0,45,1300	0/0:31,0:29:38.01:0,38,1174	0/0:33,0:32:41.49:0,41,1184	0/0:63,0:60:99:0,99,3472	0/1:15,2:17:10.15:124,0,10	0/1:8,0:8:16.76:17,0,37	0/1:5,0:5:38.55:107,0,39	0/0:16,0:11:7.17:0,7,911	0/0:36,0:34:82.31:0,82,3014	0/0:72,0:67:71.55:0,72,2800	0/0:30,0:23:59.60:0,60,1893	0/0:21,0:20:53.19:0,53,1769	0/0:31,0:27:21.51:0,22,610	0/0:20,0:19:39.13:0,39,1321	0/0:35,0:30:68.79:0,69,2816	0/0:22,0:18:42.14:0,42,1323	1/1:8,0:8:6.02:84,6,0
chr10	96311944	.	CTCATAT	C	434.98	PASS	AB=0.888;AC=9;AF=0.161;AN=56;BaseQRankSum=7.300;DP=812;FS=10.495;HRun=0;HaplotypeScore=240.6904;InbreedingCoeff=0.4682;MQ=49.70;MQ0=41;MQRankSum=-4.504;QD=6.21;ReadPosRankSum=-5.689;VQSLOD=-0.6708;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,6:16:4.17:68,4,0	0/0:12,0:12:22.28:0,22,674	0/0:70,0:19:34.09:0,34,751	0/0:50,0:18:33.25:0,33,715	0/0:25,0:20:54.61:0,55,1800	0/0:24,1:23:41.47:0,41,1121	0/0:25,0:26:15.05:0,15,537	0/0:2,0:1:3.01:0,3,41	0/0:50,0:47:55.09:0,55,1458	0/0:35,0:34:70.49:0,70,3052	0/0:15,0:15:20.11:0,20,1160	0/0:44,0:42:47.51:0,48,1389	0/0:31,0:29:38.01:0,38,1184	0/0:33,0:32:41.47:0,41,1117	0/0:62,0:59:84.39:0,84,3419	1/1:6,11:17:4.81:183,5,0	0/1:7,1:8:25.70:26,0,48	0/1:4,1:5:21.51:166,0,22	0/1:15,0:12:7.76:8,0,1118	0/0:36,0:34:90:0,90,2978	0/0:67,0:62:71.62:0,72,2806	0/0:32,0:25:44.23:0,44,2066	0/0:20,0:19:57.14:0,57,1765	0/0:28,0:25:20.27:0,20,604	0/0:19,1:19:39.12:0,39,1349	0/0:34,0:29:72.56:0,73,2887	0/0:22,0:18:42.14:0,42,1372	1/1:6,2:8:8.92:120,9,0
chr10	96311958	.	CACACACAT	C	180.25	PASS	AB=0.941;AC=7;AF=0.125;AN=56;BaseQRankSum=6.471;DP=818;FS=5.302;HRun=0;HaplotypeScore=262.6850;InbreedingCoeff=0.1307;MQ=48.19;MQ0=34;MQRankSum=-6.619;QD=1.96;ReadPosRankSum=-6.339;VQSLOD=0.7061;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:42.50:42,0,67	0/0:10,0:10:21.04:0,21,682	0/0:72,0:16:38.36:0,38,791	0/0:50,0:14:15.26:0,15,560	0/0:23,0:20:51.65:0,52,2012	0/0:23,0:22:41.96:0,42,1357	0/0:32,0:31:26.82:0,27,947	0/1:24,0:14:65.55:66,0,75	0/0:43,0:40:35.27:0,35,1256	0/0:31,0:30:81.28:0,81,3292	0/0:13,0:13:39.13:0,39,1524	0/0:43,0:42:28.15:0,28,1246	0/0:31,0:30:41.02:0,41,1346	0/0:30,0:29:23.43:0,23,865	0/0:56,0:55:77.28:0,77,3186	0/1:25,0:23:18.43:18,0,286	1/1:9,0:9:3.62:20,4,0	0/1:5,1:6:8.77:74,0,9	0/0:18,0:14:33.01:0,33,1065	0/0:33,0:31:72.06:0,72,2850	0/0:65,1:63:86.88:0,87,3564	0/0:30,0:25:60.21:0,60,2308	0/0:18,0:18:47.70:0,48,1957	0/0:24,0:21:19.19:0,19,619	0/0:19,0:19:32.93:0,33,1250	0/0:38,0:34:93.32:0,93,3670	0/0:22,0:18:42.14:0,42,1668	0/1:9,2:11:26.47:87,0,26
chr10	96312006	.	TACACACACAC	T	3985.08	PASS	AB=0.915;AC=16;AF=0.308;AN=52;BaseQRankSum=-3.434;DP=713;FS=0.519;HRun=0;HaplotypeScore=260.1570;InbreedingCoeff=0.7692;MQ=44.79;MQ0=30;MQRankSum=-0.415;QD=17.03;ReadPosRankSum=0.214;VQSLOD=1.8424;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:10.80:0,11,320	1/1:7,2:10:12.04:262,12,0	./.	./.	1/1:11,1:13:12.98:247,13,0	0/0:19,0:19:36.08:0,36,1023	0/0:28,0:28:36.56:0,37,769	0/0:44,0:33:33.07:0,33,515	0/0:27,0:27:39.10:0,39,1031	0/0:30,0:29:57.19:0,57,1596	0/0:27,0:27:26.28:0,26,852	0/0:40,0:42:39.33:0,39,672	0/0:22,0:22:30.09:0,30,647	0/0:15,0:18:17.97:0,18,359	1/1:25,8:40:51.07:1325,51,0	0/0:24,0:22:11.27:0,11,477	0/0:12,0:20:38.22:0,38,653	0/0:6,0:8:16.79:0,17,147	1/1:22,1:16:9.21:203,9,0	1/1:12,1:14:12.17:195,12,0	0/1:60,1:58:6.38:370,0,6	0/0:22,0:22:19.28:0,19,306	0/0:21,0:23:24.58:0,25,574	0/0:23,0:25:25.02:0,25,809	1/1:14,4:20:23.60:420,24,0	0/1:31,4:33:73.79:841,0,74	1/1:13,0:13:6.02:121,6,0	0/0:15,0:13:11.96:0,12,190
chr10	96312272	.	AG	A	4965.57	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.379;DP=671;FS=1.173;HRun=1;HaplotypeScore=72.2997;InbreedingCoeff=0.9998;MQ=88.22;MQ0=0;MQRankSum=-3.437;QD=40.04;ReadPosRankSum=-0.500;VQSLOD=5.1617;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,2197	0/0:13,0:13:39.13:0,39,623	0/0:25,0:25:67.23:0,67,1069	0/0:30,0:30:82.40:0,82,1227	0/0:15,0:15:45.15:0,45,719	0/0:20,0:20:60.19:0,60,936	0/0:28,0:28:84.26:0,84,1305	1/1:1,39:40:99:1637,120,0	0/0:20,0:20:60.20:0,60,959	0/0:22,0:22:66.18:0,66,1018	0/0:17,0:17:51.17:0,51,815	0/0:32,0:32:96.33:0,96,1534	0/0:12,0:12:36.12:0,36,576	0/0:17,0:17:51.17:0,51,815	0/0:23,0:23:69.21:0,69,1057	0/0:19,0:19:57.19:0,57,911	1/1:0,40:40:99:1553,111,0	1/1:1,24:25:75.12:1022,75,0	0/0:25,0:25:75.25:0,75,1180	0/0:22,0:22:63.21:0,63,1006	0/0:36,0:36:99:0,108,1726	0/0:25,0:25:69.23:0,69,1093	0/0:13,0:13:39.13:0,39,623	0/0:27,0:27:81.22:0,81,1243	0/0:12,0:12:33.11:0,33,517	0/0:24,0:24:72.24:0,72,1129	0/0:24,0:24:72.23:0,72,1102	1/1:0,19:19:54.18:754,54,0
chr10	96312617	.	TC	T	7628.63	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=9.598;DP=675;FS=3.021;HRun=3;HaplotypeScore=71.1042;InbreedingCoeff=0.9997;MQ=88.76;MQ0=0;MQRankSum=-6.500;QD=34.21;ReadPosRankSum=2.621;VQSLOD=5.6015;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,150,2101	1/1:0,12:12:36.03:426,36,0	0/0:29,0:29:72.23:0,72,1018	0/0:20,0:20:48.16:0,48,658	1/1:1,13:14:42.13:520,42,0	0/0:25,0:25:75.25:0,75,1079	0/0:39,0:39:99:0,108,1554	0/0:22,0:22:63.21:0,63,907	0/0:16,0:16:45.15:0,45,648	0/0:22,0:22:63.21:0,63,906	0/0:18,0:18:48.16:0,48,682	0/0:25,0:25:72.24:0,72,1036	0/0:19,0:19:57.19:0,57,818	0/0:12,0:12:36.12:0,36,518	1/1:1,21:22:60.19:744,60,0	0/0:20,0:20:60.20:0,60,863	0/0:29,0:29:87.28:0,87,1234	0/0:32,0:32:96.31:0,96,1364	1/1:1,19:20:57.18:706,57,0	1/1:0,13:13:39.12:483,39,0	1/1:2,79:81:99:2749,223,0	0/0:18,0:18:54.14:0,54,707	0/0:14,0:14:42.11:0,42,568	0/0:28,0:28:78.26:0,78,1123	1/1:0,10:10:27.08:335,27,0	1/1:1,24:25:32.02:848,32,0	1/1:2,24:26:66.21:818,66,0	0/0:13,0:13:39.13:0,39,562
chr10	96312877	.	GTTTT	G	4197.01	PASS	AB=0.637;AC=19;AF=0.339;AN=56;BaseQRankSum=7.048;DP=540;FS=10.599;HRun=15;HaplotypeScore=113.3902;InbreedingCoeff=0.6919;MQ=76.73;MQ0=4;MQRankSum=-5.744;QD=18.57;ReadPosRankSum=4.663;VQSLOD=1.2519;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:30:87.17:0,87,1485	1/1:0,9:9:24:304,24,0	0/1:37,0:19:0.78:1,0,195	0/0:30,0:20:26.46:0,26,224	1/1:1,9:10:17.94:244,18,0	0/0:15,0:17:48.16:0,48,981	0/0:10,0:15:36.12:0,36,764	0/1:5,0:22:14.34:14,0,46	0/0:17,0:18:52.37:0,52,922	0/0:17,0:18:51.01:0,51,817	0/0:12,0:13:27.09:0,27,586	0/0:17,0:16:33.09:0,33,613	0/0:13,0:15:39.05:0,39,823	0/0:14,0:20:36.07:0,36,676	0/1:6,16:24:12.51:545,0,13	0/0:4,0:15:27.08:0,27,521	0/0:15,0:28:66.22:0,66,1232	0/0:8,0:19:14.97:0,15,282	1/1:4,12:18:37.21:406,37,0	1/1:1,17:19:46.24:598,46,0	0/1:8,14:22:1.18:352,0,1	0/0:18,0:22:51.15:0,51,962	0/0:12,0:15:35.32:0,35,685	0/0:17,0:21:60.11:0,60,1187	1/1:3,10:13:27.01:368,27,0	1/1:5,17:24:60.07:779,60,0	1/1:2,12:15:42.09:543,42,0	0/1:1,1:9:6.13:43,0,6
chr10	96314013	.	CT	C	1219.28	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=6.356;DP=588;FS=1.467;HRun=1;HaplotypeScore=50.0742;InbreedingCoeff=0.9856;MQ=49.84;MQ0=38;MQRankSum=3.487;QD=22.58;ReadPosRankSum=1.761;VQSLOD=3.7794;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:39:81.25:0,81,1265	0/0:9,0:9:21:0,21,260	./.	./.	0/0:22,0:22:54.17:0,54,835	0/0:13,0:13:15.05:0,15,237	0/0:23,0:17:42.11:0,42,618	0/0:24,0:20:60.20:0,60,949	0/0:31,0:25:69.22:0,69,1077	0/0:21,0:18:51.14:0,51,751	0/0:30,0:28:54.11:0,54,789	0/0:21,0:19:36.11:0,36,552	0/0:10,0:8:21.07:0,21,335	0/0:21,0:19:42.14:0,42,667	0/0:21,0:20:48.10:0,48,721	0/0:13,0:11:24.07:0,24,358	1/1:5,26:28:60.20:838,60,0	1/1:6,17:20:36.12:502,36,0	0/0:30,0:22:63.21:0,63,1002	0/0:20,0:19:51.17:0,51,811	0/0:45,0:40:66.17:0,66,1024	0/0:12,0:12:30.09:0,30,454	0/0:16,0:15:42.14:0,42,661	0/0:26,0:25:57.19:0,57,909	0/0:16,0:16:33.10:0,33,505	0/0:29,0:26:78.24:0,78,1199	0/0:26,0:21:50.98:0,51,789	0/0:9,0:9:27.09:0,27,428
chr10	96314112	.	TGTTTG	T	5890.52	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=8.073;DP=588;FS=4.356;HRun=0;HaplotypeScore=119.3593;InbreedingCoeff=0.9977;MQ=71.96;MQ0=3;MQRankSum=-3.158;QD=34.65;ReadPosRankSum=-0.250;VQSLOD=4.6994;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,114,3303	1/1:3,9:12:20.83:367,21,0	0/0:35,0:21:39.44:0,39,703	0/0:35,0:24:39.61:0,40,777	1/1:5,9:14:26.99:407,27,0	0/0:17,0:17:48.16:0,48,1407	0/0:19,0:19:45.15:0,45,1310	0/0:23,0:23:42.14:0,42,1099	0/0:18,0:18:51.18:0,51,1356	0/0:16,0:16:39.12:0,39,1022	0/0:20,0:20:48.16:0,48,1365	0/0:21,0:20:54.19:0,54,1576	0/0:12,0:12:30.07:0,30,783	0/0:18,0:18:51.18:0,51,1485	1/1:3,9:12:24.08:465,24,0	0/0:21,0:21:54.19:0,54,1538	0/0:33,0:33:81.28:0,81,2324	0/0:20,0:20:51.17:0,51,1495	1/1:12,7:19:21:271,21,0	1/1:0,17:17:48:850,48,0	1/1:9,13:21:29.85:573,30,0	0/0:12,0:12:30.10:0,30,879	0/0:20,0:20:60.19:0,60,1644	0/0:21,0:21:45.15:0,45,1319	1/1:4,17:21:48.12:892,48,0	1/1:5,21:26:63.14:1039,63,0	1/1:5,22:26:54.18:1026,54,0	0/0:11,0:11:27.09:0,27,728
chr10	96314575	.	A	AT	12647.39	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-2.253;DP=522;FS=1.794;HRun=8;HaplotypeScore=64.8775;InbreedingCoeff=0.9440;MQ=60.78;MQ0=7;MQRankSum=2.316;QD=27.74;ReadPosRankSum=5.171;VQSLOD=5.0498;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,39:40:99:1246,108,0	1/1:1,5:6:17.79:185,18,0	0/0:8,0:5:8.94:0,9,73	0/0:10,0:6:5.72:0,6,36	1/1:1,21:22:57.17:655,57,0	1/1:1,20:21:54.16:623,54,0	1/1:5,15:20:36.11:415,36,0	0/0:31,1:32:58.32:0,58,768	1/1:2,18:20:48.14:554,48,0	1/1:0,19:19:57.17:658,57,0	1/1:3,27:30:53.72:853,54,0	1/1:0,7:7:21.06:242,21,0	1/1:3,13:16:39.07:435,39,0	1/1:1,9:10:21.06:242,21,0	1/1:2,14:16:42.12:485,42,0	1/1:1,11:12:27.08:312,27,0	1/1:8,19:27:32.65:645,33,0	1/1:2,26:24:60.04:671,60,0	1/1:5,24:28:72.21:830,72,0	1/1:1,11:12:30.09:345,30,0	1/1:0,7:8:21.06:240,21,0	1/1:5,8:13:24:260,24,0	1/1:2,20:21:54.16:623,54,0	1/1:0,12:12:30.09:346,30,0	1/1:3,20:23:57.09:640,57,0	1/1:1,17:17:45.13:519,45,0	1/1:5,19:24:54.16:622,54,0	0/0:16,0:16:48.03:0,48,439
chr10	96314804	.	T	TA	1680.26	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=-4.807;DP=599;FS=13.702;HRun=1;HaplotypeScore=72.3284;InbreedingCoeff=0.9617;MQ=46.56;MQ0=72;MQRankSum=0.654;QD=33.61;ReadPosRankSum=2.493;VQSLOD=2.2344;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:29:57.01:0,57,693	0/0:6,0:6:18.06:0,18,251	0/0:14,0:3:9.02:0,9,99	./.	0/0:25,0:24:60.14:0,60,793	0/0:29,0:25:48.07:0,48,623	0/0:25,0:22:56.99:0,57,658	0/0:38,0:25:69.20:0,69,912	0/0:17,0:16:30.09:0,30,404	0/0:22,0:19:57.19:0,57,790	0/0:12,0:12:24.04:0,24,309	0/0:14,0:14:27.09:0,27,377	0/0:17,0:16:45.14:0,45,611	0/0:14,0:14:33.07:0,33,435	0/0:22,0:19:45.04:0,45,561	0/0:23,0:23:60.11:0,60,793	1/1:0,28:27:72.24:1115,72,0	1/1:0,22:19:45.15:686,45,0	0/0:14,0:7:21.06:0,21,273	0/0:26,0:26:60.15:0,60,800	0/0:23,0:16:38.82:0,39,544	0/0:21,0:20:39.11:0,39,514	0/0:15,0:12:36.11:0,36,487	0/0:28,0:23:60.11:0,60,776	0/0:20,0:20:48.02:0,48,623	0/0:20,0:19:54.14:0,54,705	0/0:40,0:37:78.09:0,78,996	0/0:15,0:13:24.03:0,24,335
chr10	96315157	.	CAA	C	6750.62	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=6.596;DP=539;FS=2.454;HRun=10;HaplotypeScore=71.4948;InbreedingCoeff=0.9903;MQ=56.62;MQ0=0;MQRankSum=2.801;QD=27.78;ReadPosRankSum=3.834;VQSLOD=5.2107;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:22:54.65:0,55,837	0/0:10,0:10:27.09:0,27,428	0/0:8,0:5:14.26:0,14,190	0/0:11,0:9:16.86:0,17,210	0/0:36,0:36:96.33:0,96,1514	1/1:3,17:20:42.11:468,42,0	1/1:0,20:20:54.15:602,54,0	0/0:26,0:26:54.18:0,54,856	1/1:0,16:16:45.12:500,45,0	1/1:1,22:23:66.16:725,66,0	1/1:0,13:13:39.11:433,39,0	1/1:3,25:27:54.14:602,54,0	1/1:1,16:17:42.11:468,42,0	1/1:3,18:21:54.14:602,54,0	0/0:20,0:20:54.18:0,54,857	0/0:12,0:12:30.07:0,30,449	1/1:3,15:18:42.11:468,42,0	1/1:4,4:8:12.02:134,12,0	0/0:24,0:23:56.68:0,57,865	0/0:25,0:25:69.24:0,69,1095	0/0:13,0:13:36.12:0,36,570	1/1:1,17:18:48.13:533,48,0	1/1:0,20:20:57.15:635,57,0	1/1:1,19:21:53.87:580,54,0	0/0:22,0:22:60.20:0,60,925	0/0:26,0:26:72.19:0,72,1074	0/0:33,0:34:84.27:0,84,1272	0/0:6,0:6:18.05:0,18,264
chr10	96315866	.	GTC	G	4504.62	PASS	AB=0.873;AC=36;AF=0.667;AN=54;BaseQRankSum=0.238;DP=798;FS=15.167;HRun=0;HaplotypeScore=184.6297;InbreedingCoeff=0.4710;MQ=46.12;MQ0=60;MQRankSum=2.239;QD=7.67;ReadPosRankSum=3.049;VQSLOD=3.5297;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:31:12.83:106,0,13	0/1:9,0:7:3.93:71,0,4	0/0:30,0:20:33.79:0,34,563	0/0:39,0:24:65.83:0,66,903	1/1:11,0:10:11.03:89,11,0	1/1:19,5:18:33.27:317,33,0	1/1:22,7:23:29.42:240,29,0	0/0:54,0:41:95.77:0,96,1020	1/1:16,6:21:33.84:300,34,0	1/1:37,7:36:29.56:672,30,0	./.	0/1:19,9:26:18.50:149,0,19	1/1:22,5:25:31.41:343,31,0	1/1:25,5:27:25.13:216,25,0	1/1:32,1:32:35.74:294,36,0	0/1:21,4:23:35.29:186,0,35	0/0:30,0:26:17.95:0,18,196	0/0:25,0:23:53.05:0,53,551	1/1:20,2:16:20.08:244,20,0	0/1:23,0:18:53.71:103,0,54	0/1:32,50:71:3.91:4,0,93	1/1:17,7:22:24.01:239,24,0	1/1:14,4:16:17.97:147,18,0	1/1:30,13:37:17.81:161,18,0	1/1:11,1:9:4.73:66,5,0	1/1:27,3:26:3.31:405,3,0	1/1:15,0:14:3.39:154,3,0	0/0:21,0:21:9.44:0,9,613
chr10	96315868	.	C	CTGTG	925.47	PASS	AB=0.986;AC=19;AF=0.352;AN=54;BaseQRankSum=-3.250;DP=792;FS=0.618;HRun=0;HaplotypeScore=211.3229;InbreedingCoeff=-0.0059;MQ=44.15;MQ0=65;MQRankSum=2.480;QD=2.26;ReadPosRankSum=-3.914;VQSLOD=1.9752;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:29:16.61:0,17,151	0/0:9,0:7:6.20:0,6,58	0/0:29,0:19:16.92:0,17,192	0/0:36,0:22:24.53:0,25,293	1/1:9,0:8:3.46:25,3,0	0/1:23,0:18:13.67:79,0,14	0/1:28,0:22:8.02:44,0,8	0/1:57,0:42:57.92:58,0,265	1/1:21,0:20:5.27:99,5,0	0/1:47,0:36:40.55:199,0,41	./.	0/0:29,0:27:9.83:0,10,91	0/1:27,0:25:40.22:40,0,41	0/1:30,0:27:14.64:79,0,15	0/0:31,0:30:8.18:0,8,65	0/0:26,0:23:15.66:0,16,241	0/0:11,20:27:4.86:0,5,74	0/1:21,3:22:99:236,0,281	0/1:23,0:16:7.19:33,0,7	0/1:23,0:18:37.83:38,0,182	0/0:83,0:72:12.46:0,12,148	0/1:24,0:22:7.91:33,0,8	1/1:16,0:14:2.38:23,2,0	1/1:45,0:39:10.26:80,10,0	0/1:12,0:8:12.56:20,0,13	0/0:27,0:23:25.05:0,25,202	0/0:14,0:13:20.03:0,20,151	0/0:20,0:20:2.24:0,2,189
chr10	96315874	.	GTGTC	G	3848.96	PASS	AB=0.977;AC=35;AF=0.648;AN=54;BaseQRankSum=-4.843;DP=774;FS=7.298;HRun=0;HaplotypeScore=188.5309;InbreedingCoeff=-0.2324;MQ=40.11;MQ0=76;MQRankSum=3.078;QD=5.38;ReadPosRankSum=-1.110;VQSLOD=1.7697;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:27:5.53:6,0,21	0/1:9,0:7:28.88:39,0,29	0/0:21,0:12:3.69:0,4,85	0/0:26,0:12:5.64:0,6,160	1/1:9,0:8:6.46:49,6,0	1/1:19,5:18:33:378,33,0	1/1:25,5:24:18.78:286,19,0	0/1:56,0:37:99:223,0,364	1/1:16,6:20:29.93:291,30,0	0/1:42,5:32:11.81:558,0,12	./.	0/1:19,9:26:70.80:134,0,71	1/1:22,5:25:35.53:356,36,0	1/1:28,5:29:26.69:274,27,0	0/1:31,0:30:32.69:51,0,33	0/1:25,0:22:36.03:140,0,36	0/1:31,0:27:24.08:24,0,107	0/1:23,0:21:99:165,0,520	0/1:23,0:15:13.28:116,0,13	0/1:24,0:19:60.08:60,0,185	0/1:86,0:72:3.05:3,0,177	1/1:16,6:20:18:188,18,0	1/1:12,4:13:11.99:101,12,0	1/1:33,12:39:14.36:155,14,0	1/1:12,0:8:7.25:71,7,0	0/1:23,0:19:81.81:82,0,164	0/1:15,0:14:54.02:54,0,74	0/1:20,0:20:46.90:47,0,265
chr10	96315876	.	GTC	G	3963.04	PASS	AB=0.970;AC=36;AF=0.667;AN=54;BaseQRankSum=-3.997;DP=762;FS=7.347;HRun=0;HaplotypeScore=174.6256;InbreedingCoeff=-0.1549;MQ=39.53;MQ0=76;MQRankSum=4.091;QD=5.59;ReadPosRankSum=-0.304;VQSLOD=2.7436;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:26:26.05:26,0,37	0/1:8,0:6:4.60:59,0,5	0/0:18,0:10:4.78:0,5,100	0/0:23,0:11:6.05:0,6,178	1/1:10,0:9:13.78:99,14,0	1/1:24,0:18:32.82:317,33,0	1/1:28,1:23:9.50:205,10,0	0/1:38,18:37:99:300,0,246	1/1:22,0:20:27.85:249,28,0	0/1:47,0:31:4.16:528,0,4	./.	0/1:28,0:26:57.72:108,0,58	1/1:27,0:25:28.43:320,28,0	1/1:33,0:29:25.44:217,25,0	1/1:28,0:27:17.80:153,18,0	0/1:23,1:21:36.76:159,0,37	0/1:28,0:24:25.19:25,0,68	0/1:22,1:21:99:111,0,391	0/1:23,0:15:18.78:125,0,19	0/1:26,0:21:86.64:107,0,87	0/1:86,0:72:3.43:3,0,118	1/1:22,0:20:18:183,18,0	1/1:15,0:12:11.98:98,12,0	1/1:45,0:39:12.10:116,12,0	1/1:12,0:8:8.04:74,8,0	0/1:23,1:20:69.21:210,0,69	0/1:15,1:14:1.36:132,0,1	0/1:19,0:19:37.12:37,0,166
chr10	96315896	.	CTG	C	285.13	PASS	AB=0.972;AC=14;AF=0.269;AN=52;BaseQRankSum=0.900;DP=797;FS=12.881;HRun=0;HaplotypeScore=205.5183;InbreedingCoeff=0.0865;MQ=33.79;MQ0=90;MQRankSum=1.644;QD=1.06;ReadPosRankSum=-2.449;VQSLOD=1.4625;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:30:3.11:3,0,239	0/1:16,0:14:16.67:36,0,17	./.	./.	0/0:15,1:14:2.14:0,2,22	0/0:27,0:20:7.72:0,8,73	0/0:32,1:26:14.76:0,15,106	0/0:74,0:36:75.61:0,76,778	1/1:23,0:20:1.44:14,1,0	0/0:43,0:25:13.94:0,14,224	1/1:16,0:12:1.25:3,1,0	0/0:31,0:28:11.17:0,11,127	0/0:26,0:22:14.05:0,14,113	0/0:32,0:27:5.96:0,6,44	0/1:35,3:36:21.64:68,0,22	0/0:22,0:20:14.08:0,14,309	0/0:26,0:23:10.22:0,10,74	0/0:22,0:20:16.78:0,17,397	0/0:16,0:10:11.85:0,12,79	0/1:29,1:24:51.16:101,0,51	0/0:92,1:74:5.01:0,5,122	0/1:24,0:22:0.51:1,0,12	0/1:17,0:12:0:0,0,0	0/0:44,0:37:11.83:0,12,72	1/1:18,1:13:3.21:37,3,0	0/1:25,2:23:85.64:86,0,89	0/1:19,1:18:59.48:64,0,59	0/0:23,0:23:31.95:0,32,292
chr10	96315906	.	GTC	G	1948.63	PASS	AB=0.930;AC=32;AF=0.615;AN=52;BaseQRankSum=-2.408;DP=809;FS=4.355;HRun=0;HaplotypeScore=196.6292;InbreedingCoeff=-0.2016;MQ=33.61;MQ0=89;MQRankSum=6.022;QD=2.76;ReadPosRankSum=-2.897;VQSLOD=2.3669;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,1:30:81.03:81,0,139	1/1:13,0:11:14.78:105,15,0	./.	./.	1/1:17,0:15:16.88:140,17,0	0/1:28,1:22:19.73:119,0,20	0/1:32,7:32:8.97:9,0,62	0/0:84,0:47:99:0,100,876	1/1:21,5:23:21.53:207,22,0	0/1:44,5:29:99:197,0,110	1/1:12,3:11:5.98:49,6,0	0/1:27,5:30:37.64:38,0,76	0/1:25,2:22:24.62:79,0,25	0/1:28,0:23:8.07:32,0,8	0/1:39,0:37:1.20:63,0,1	0/0:19,1:18:24.72:0,25,185	0/1:17,1:15:21.57:22,0,56	0/1:23,0:21:95.45:95,0,326	1/1:11,0:7:9.38:65,9,0	0/1:30,0:24:14.08:121,0,14	0/1:87,1:67:54.52:57,0,55	1/1:20,5:23:8.91:63,9,0	0/1:15,3:13:0:0,0,0	0/1:47,2:42:1.83:57,0,2	1/1:20,0:14:23.47:171,23,0	0/1:10,12:18:64.33:153,0,64	1/1:24,0:22:27.26:163,27,0	0/1:23,0:23:18.72:19,0,378
chr10	96315908	.	CTG	C	117.84	PASS	AB=0.952;AC=11;AF=0.212;AN=52;BaseQRankSum=2.388;DP=814;FS=3.745;HRun=0;HaplotypeScore=202.8392;InbreedingCoeff=0.0599;MQ=33.85;MQ0=93;MQRankSum=2.002;QD=0.62;ReadPosRankSum=-0.244;VQSLOD=2.5390;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:39,1:31:56.88:93,0,57	0/0:13,0:11:5.59:0,6,35	./.	./.	0/0:17,1:16:5.07:0,5,43	0/0:30,0:23:1.09:0,1,53	0/0:39,0:32:2.91:0,3,50	0/0:82,0:46:90.58:0,91,1080	0/1:24,2:24:9.60:18,0,10	0/0:49,0:29:3.10:0,3,140	1/1:16,0:11:1.70:5,2,0	0/0:31,0:29:8.72:0,9,74	0/0:25,0:20:11.19:0,11,65	0/0:29,1:24:4.37:0,4,50	0/0:36,2:36:3:0,3,33	0/1:18,1:17:28.83:29,0,46	0/1:16,1:15:25.48:25,0,58	0/0:23,0:21:12.71:0,13,222	0/0:10,0:6:8.88:0,9,59	0/0:30,0:24:5.36:0,5,38	0/0:89,0:68:17.46:0,17,124	1/1:26,0:23:2.44:6,2,0	0/0:20,0:15:2.97:0,3,25	0/0:48,0:41:7.44:0,7,50	1/1:21,0:15:4.20:18,4,0	0/0:24,0:20:18.58:0,19,172	0/0:24,0:22:23.76:0,24,139	0/1:22,1:23:48.78:49,0,486
chr10	96315912	.	G	GTA	390.43	PASS	AB=0.902;AC=6;AF=0.115;AN=52;BaseQRankSum=2.505;DP=833;FS=5.691;HRun=0;HaplotypeScore=204.7040;InbreedingCoeff=-0.1558;MQ=34.93;MQ0=95;MQRankSum=-3.353;QD=1.53;ReadPosRankSum=5.234;VQSLOD=1.8289;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,2:33:7.29:7,0,338	0/0:15,0:13:20.90:0,21,161	./.	./.	0/0:19,0:17:21.38:0,21,162	0/0:30,0:23:18.02:0,18,140	0/0:40,0:32:12.28:0,12,107	0/0:83,0:45:65.54:0,66,1264	0/0:29,0:25:20.38:0,20,151	0/0:49,0:30:28.87:0,29,325	0/0:16,0:11:6.47:0,6,52	0/1:30,3:30:35.60:36,0,119	0/0:25,1:20:27.85:0,28,174	0/0:20,7:25:5.27:0,5,37	0/0:26,8:38:14.90:0,15,130	0/0:19,0:17:20.98:0,21,232	0/0:17,0:15:11.46:0,11,101	0/1:16,7:21:99:339,0,127	0/0:14,0:8:23.76:0,24,172	0/0:30,0:24:8.97:0,9,167	0/1:86,2:68:22.64:23,0,198	0/0:23,2:22:8.84:0,9,58	0/0:17,1:14:3:0,3,25	0/1:35,5:40:27.15:85,0,27	0/0:21,0:15:19.88:0,20,153	0/0:27,0:24:40.73:0,41,344	0/0:27,0:25:13.94:0,14,252	0/1:23,0:23:19.02:19,0,598
chr10	96315920	.	GTGTC	G	1866.81	PASS	AB=0.921;AC=21;AF=0.404;AN=52;BaseQRankSum=0.030;DP=822;FS=0.963;HRun=0;HaplotypeScore=187.4720;InbreedingCoeff=0.2666;MQ=37.00;MQ0=89;MQRankSum=3.871;QD=4.20;ReadPosRankSum=-2.387;VQSLOD=2.0411;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:35:73.75:162,0,74	0/0:14,0:12:21.66:0,22,241	./.	./.	0/0:20,0:18:32.82:0,33,303	1/1:30,1:24:0.56:166,1,0	0/1:35,7:34:23.76:106,0,24	0/0:82,0:52:99:0,102,1717	1/1:26,5:27:26.64:342,27,0	0/1:39,5:26:99:297,0,115	1/1:12,3:10:8.97:70,9,0	0/1:28,5:30:51.31:109,0,51	1/1:26,2:22:19.94:194,20,0	1/1:31,0:25:8.97:111,9,0	0/0:37,0:35:14.51:0,15,153	0/0:19,0:17:9.19:0,9,55	0/1:16,2:15:22.42:22,0,57	0/1:20,0:18:82.04:82,0,465	0/0:15,0:10:27:0,27,303	0/0:29,0:23:30:0,30,317	0/0:82,0:65:32.05:0,32,431	1/1:20,5:22:17.98:150,18,0	0/1:14,3:13:0:0,0,0	0/1:42,2:37:9.60:119,0,10	0/0:20,0:14:18.18:0,18,168	0/0:26,0:24:42.23:0,42,584	0/0:27,0:25:35.83:0,36,472	0/1:22,0:22:99:110,0,882
chr10	96315922	.	GTC	G	2177.54	PASS	AB=0.981;AC=23;AF=0.426;AN=54;BaseQRankSum=1.332;DP=812;FS=0.000;HRun=0;HaplotypeScore=162.5906;InbreedingCoeff=0.3320;MQ=37.32;MQ0=88;MQRankSum=4.761;QD=4.74;ReadPosRankSum=-0.979;VQSLOD=2.9375;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:43,1:35:10.26:364,0,10	0/0:14,0:12:9.81:0,10,156	./.	0/0:7,0:1:3:0,3,27	0/0:20,0:18:32.96:0,33,311	1/1:30,0:23:16.83:201,17,0	0/1:40,1:34:32.77:127,0,33	0/0:76,0:50:94.41:0,94,1566	1/1:32,0:28:28.46:323,28,0	0/1:42,0:25:69.09:249,0,69	1/1:15,1:11:11.98:102,12,0	0/1:33,0:30:37.47:97,0,37	1/1:28,0:22:13.89:172,14,0	1/1:31,0:25:13.57:124,14,0	0/0:37,0:35:17.49:0,17,151	1/1:18,2:18:17.77:182,18,0	0/1:17,0:15:28.26:28,0,52	0/1:20,0:18:50.88:51,0,328	0/0:16,0:10:28.32:0,28,250	0/0:27,0:23:29.99:0,30,278	0/0:79,0:62:31.84:0,32,362	1/1:25,0:22:17.85:135,18,0	0/1:16,0:12:0:0,0,0	0/1:43,0:36:8.55:112,0,9	0/0:19,0:14:11.32:0,11,142	0/0:25,0:23:14.53:0,15,483	0/0:29,0:27:27.96:0,28,459	0/1:18,3:21:97.95:98,0,614
chr10	96315999	.	TGTATCTGTGTCTGTGTGTGC	T	1562.03	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.670;DP=858;FS=0.000;HRun=0;HaplotypeScore=405.9879;InbreedingCoeff=0.9973;MQ=60.69;MQ0=2;MQRankSum=-8.299;QD=22.97;ReadPosRankSum=-7.616;VQSLOD=-0.0403;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,28:41:34.83:965,35,0	0/0:15,0:15:39.13:0,39,2907	0/0:40,0:28:45.15:0,45,2355	0/0:41,0:30:31.91:0,32,1737	0/0:22,0:22:54.19:0,54,4591	0/0:33,0:32:73.62:0,74,5505	0/0:25,0:24:32.33:0,32,2568	0/0:43,0:43:75.24:0,75,4090	0/0:44,0:44:99:0,107,7575	0/0:34,0:33:66.20:0,66,4718	0/0:22,0:22:51.14:0,51,3130	0/0:37,0:35:84.29:0,84,6482	0/0:26,0:26:66.21:0,66,4275	0/0:27,0:27:62.35:0,62,5164	0/0:39,0:39:99:0,99,7581	1/1:3,22:25:24.08:718,24,0	0/0:27,0:26:75.26:0,75,5694	0/0:38,0:38:77.89:0,78,5639	0/0:26,0:23:48.15:0,48,2801	0/0:28,0:28:78.20:0,78,5639	0/0:47,0:46:66.14:0,66,4994	0/0:24,0:23:45.14:0,45,3114	0/0:18,0:18:34.35:0,34,2823	0/0:38,0:38:81.47:0,81,5954	0/0:21,0:20:48.16:0,48,3962	0/0:33,0:33:81.25:0,81,6210	0/0:34,0:34:72.25:0,72,4764	0/0:8,0:8:24.08:0,24,1974
chr10	96317535	.	G	GTACAGGCACTCTGGTTC	54285.78	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-5.431;DP=674;FS=21.108;HRun=0;HaplotypeScore=226.8966;InbreedingCoeff=0.9893;MQ=77.45;MQ0=0;MQRankSum=-16.016;QD=120.64;ReadPosRankSum=1.546;VQSLOD=2.7817;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,160,6883	1/1:4,3:10:21.03:1250,21,0	0/0:17,0:17:45.11:0,45,1447	0/0:27,0:27:68.40:0,68,2084	1/1:4,7:25:27.09:1657,27,0	1/1:3,10:20:39.13:2938,39,0	1/1:18,8:42:72.24:4294,72,0	0/0:33,0:33:90.29:0,90,3497	1/1:1,11:29:39.13:3265,39,0	1/1:6,6:22:56.35:3085,56,0	1/1:3,4:16:24.08:1949,24,0	1/1:4,13:24:48.16:3828,48,0	1/1:6,6:20:38.74:2595,39,0	1/1:3,9:20:33.11:2556,33,0	1/1:2,15:29:51.35:4252,51,0	0/0:30,0:30:90.30:0,90,3947	0/0:36,0:36:99:0,105,4895	0/0:21,0:21:60.19:0,60,2681	1/1:6,4:22:60.19:3319,60,0	1/1:7,7:25:48.05:2537,48,0	1/1:5,3:16:18.06:1249,18,0	1/1:5,11:29:39.13:3008,39,0	1/1:6,7:19:35.87:2331,36,0	1/1:8,3:21:15.05:952,15,0	1/1:4,5:18:27.09:2046,27,0	1/1:11,9:29:81.25:4785,81,0	1/1:3,7:11:30.10:2388,30,0	0/0:4,0:4:12.04:0,12,500
chr10	96317705	.	G	GT	574.61	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.062;DP=544;FS=14.586;HRun=0;HaplotypeScore=141.9655;InbreedingCoeff=0.9920;MQ=63.96;MQ0=5;MQRankSum=-2.666;QD=17.41;ReadPosRankSum=-1.862;VQSLOD=4.0435;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:24.01:300,24,0	0/0:9,0:9:27.04:0,27,338	0/0:17,0:16:44.45:0,44,547	0/0:15,0:14:23.67:0,24,379	0/0:23,0:23:60.20:0,60,832	0/0:17,0:15:36.08:0,36,480	0/0:34,0:34:87.03:0,87,1065	0/0:23,0:23:66.16:0,66,877	0/0:14,0:14:42.14:0,42,586	0/0:25,0:24:72.24:0,72,996	0/0:19,0:19:57.19:0,57,793	0/0:17,0:17:45.15:0,45,627	0/0:10,0:10:27.05:0,27,350	0/0:11,0:11:33.02:0,33,416	0/0:20,0:20:51.13:0,51,685	1/1:0,13:13:30.03:395,30,0	0/0:40,0:40:99:0,114,1557	0/0:31,0:31:90.30:0,90,1259	0/0:24,0:24:72.20:0,72,968	0/0:12,0:12:24.07:0,24,318	0/0:19,1:17:23.98:0,24,312	0/0:20,0:20:54.18:0,54,748	0/0:23,0:23:60.10:0,60,832	0/0:25,0:25:62.93:0,63,857	0/0:13,0:12:39.13:0,39,544	0/0:21,0:21:60.20:0,60,837	0/0:20,0:20:51.17:0,51,707	0/0:8,0:7:21.07:0,21,294
chr10	96317732	.	GTGCTTA	G	13140.08	PASS	AB=0.522;AC=39;AF=0.750;AN=52;BaseQRankSum=13.920;DP=367;FS=12.710;HRun=0;HaplotypeScore=117.2857;InbreedingCoeff=0.8295;MQ=40.55;MQ0=8;MQRankSum=-9.573;QD=51.33;ReadPosRankSum=3.373;VQSLOD=4.4949;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,6:6:15.05:347,15,0	0/0:6,0:5:9.03:0,9,226	0/0:3,0:2:6.02:0,6,197	1/1:0,15:15:32.85:791,33,0	1/1:1,14:13:30.10:732,30,0	0/1:2,22:24:99:1022,0,135	0/0:29,0:29:87.29:0,87,3099	1/1:0,11:11:33.11:777,33,0	1/1:3,13:15:34.68:833,35,0	1/1:3,10:11:22.21:436,22,0	1/1:0,11:11:24.08:564,24,0	1/1:0,7:7:21.07:502,21,0	1/1:3,7:10:12.89:483,13,0	1/1:2,7:9:16.98:500,17,0	./.	0/0:38,0:38:99:0,102,3711	0/0:28,0:27:78.27:0,78,2936	1/1:1,15:16:45.14:1018,45,0	1/1:9,0:8:5.99:79,6,0	1/1:3,10:10:24.08:545,24,0	1/1:0,11:11:30.10:701,30,0	1/1:0,16:16:42.11:963,42,0	1/1:5,14:19:42.85:904,43,0	1/1:1,8:8:21.07:455,21,0	1/1:2,13:15:37.61:905,38,0	1/1:0,11:11:23.66:582,24,0	0/0:7,0:6:18.04:0,18,589
chr10	96317734	.	GCTTACC	G	13204.99	PASS	AB=1.000;AC=39;AF=0.750;AN=52;BaseQRankSum=13.832;DP=363;FS=7.554;HRun=0;HaplotypeScore=115.2371;InbreedingCoeff=0.8202;MQ=37.73;MQ0=10;MQRankSum=-10.029;QD=52.61;ReadPosRankSum=3.876;VQSLOD=4.7539;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:6,0:6:15.05:362,15,0	0/0:5,0:4:9.01:0,9,142	0/0:3,0:2:6.02:0,6,178	1/1:15,0:15:32.85:782,33,0	1/1:15,0:13:30.10:704,30,0	0/1:25,0:24:99:1016,0,174	0/0:29,0:29:87.30:0,87,3230	1/1:11,0:11:33.11:787,33,0	1/1:16,0:15:36.12:861,36,0	1/1:12,0:10:21.04:455,21,0	1/1:11,0:11:24.08:573,24,0	1/1:7,0:7:21.07:498,21,0	1/1:9,0:9:21.07:496,21,0	1/1:8,1:9:21.07:489,21,0	./.	0/0:39,0:39:99:0,105,3702	0/0:29,0:28:81.28:0,81,3030	1/1:15,1:16:42.11:992,42,0	1/1:1,7:7:3.01:74,3,0	1/1:13,0:10:24.08:572,24,0	1/1:11,0:11:30.10:717,30,0	1/1:16,0:16:42.11:1016,42,0	1/1:16,0:16:36.12:865,36,0	1/1:9,0:7:21.06:455,21,0	1/1:15,0:15:39.13:931,39,0	1/1:11,0:11:23.98:560,24,0	0/0:6,0:5:15.05:0,15,565
chr10	96317790	.	C	CA	2305.29	PASS	AB=0.786;AC=19;AF=0.352;AN=54;BaseQRankSum=-1.503;DP=473;FS=1.454;HRun=13;HaplotypeScore=100.1906;InbreedingCoeff=0.3770;MQ=52.80;MQ0=14;MQRankSum=-1.030;QD=9.08;ReadPosRankSum=0.081;VQSLOD=3.0026;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,4:8:14.85:126,15,0	0/0:13,0:8:15.99:0,16,86	0/0:8,0:5:3.21:0,3,19	0/1:11,11:20:2.01:236,0,2	0/0:21,0:20:42.90:0,43,291	0/1:17,3:21:32.83:33,0,185	0/0:22,0:21:27.40:0,27,181	0/0:21,2:24:14.20:0,14,266	0/0:18,0:17:35.40:0,35,235	0/0:10,0:10:16.90:0,17,107	0/0:20,0:19:39.86:0,40,252	0/0:13,0:13:20.59:0,21,138	0/0:17,0:17:37.46:0,37,241	1/1:4,14:19:9.07:216,9,0	0/0:1,0:1:1.25:0,1,3	1/1:14,25:40:23.12:448,23,0	1/1:11,14:23:13.77:305,14,0	1/1:12,15:27:30.18:435,30,0	1/1:5,7:12:6.62:202,7,0	0/1:6,1:6:18.91:19,0,32	0/0:16,1:17:6.89:0,7,183	0/1:9,1:11:7.91:8,0,88	0/0:25,1:26:31.62:0,32,361	0/1:8,11:19:13.60:191,0,14	0/1:12,3:15:20.18:108,0,20	0/1:16,6:23:28.31:160,0,28	0/0:2,0:3:5:0,5,26
chr10	96318224	.	TCAGCAGGAGTTCA	T	3043.02	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.309;DP=560;FS=23.338;HRun=0;HaplotypeScore=197.5732;InbreedingCoeff=0.9875;MQ=90.44;MQ0=0;MQRankSum=-8.714;QD=78.03;ReadPosRankSum=1.841;VQSLOD=1.5073;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,16:21:45.15:1757,45,0	0/0:15,0:15:45.15:0,45,2788	0/0:35,0:34:96.09:0,96,4373	0/0:21,0:20:52.89:0,53,2639	0/0:26,0:26:75.24:0,75,4409	0/0:24,0:24:72.25:0,72,4424	0/0:24,0:24:66.23:0,66,4136	0/0:30,0:30:78.27:0,78,4637	0/0:18,0:18:54.19:0,54,3239	0/0:20,0:20:51.17:0,51,2906	0/0:18,0:18:48.16:0,48,2909	0/0:18,0:18:42.09:0,42,2261	0/0:18,0:18:51.18:0,51,3117	0/0:13,0:13:36.12:0,36,2331	0/0:28,0:28:81.28:0,81,5081	1/1:0,17:17:36.12:1408,36,0	0/0:24,0:24:72.23:0,72,4471	0/0:15,0:15:42.14:0,42,2492	0/0:25,0:24:63.22:0,63,3679	0/0:13,0:13:36.12:0,36,2125	0/0:29,0:29:75.26:0,75,4244	0/0:8,0:8:18.06:0,18,1152	0/0:14,0:14:42.14:0,42,2397	0/0:22,0:22:60.21:0,60,3783	0/0:15,0:15:36.12:0,36,2306	0/0:26,0:26:75.24:0,75,4332	0/0:14,0:13:42.14:0,42,2633	0/0:8,0:8:15.05:0,15,940
chr10	96319461	.	CA	C	2321.39	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=11.440;DP=567;FS=24.252;HRun=1;HaplotypeScore=55.8588;InbreedingCoeff=0.9962;MQ=73.62;MQ0=0;MQRankSum=-1.370;QD=38.69;ReadPosRankSum=1.795;VQSLOD=1.7144;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:81.26:0,81,1259	0/0:7,0:7:21.06:0,21,312	0/0:28,0:28:84.26:0,84,1247	0/0:24,0:24:45.05:0,45,885	0/0:19,0:19:57.16:0,57,861	0/0:25,0:25:75.24:0,75,1169	0/0:20,0:20:60.20:0,60,956	0/0:20,0:20:57.10:0,57,812	0/0:15,0:15:45.11:0,45,645	0/0:17,0:17:51.17:0,51,795	0/0:21,0:21:63.21:0,63,1004	0/0:24,0:24:69.22:0,69,1078	0/0:12,0:12:36.12:0,36,575	0/0:9,0:9:24.08:0,24,383	0/0:24,0:24:72.25:0,72,1150	0/0:20,0:20:60.17:0,60,890	1/1:1,31:32:96.28:1316,96,0	1/1:0,28:28:81.27:1127,81,0	0/0:14,0:14:42.11:0,42,603	0/0:13,0:13:39.13:0,39,623	0/0:30,0:30:90.24:0,90,1380	0/0:19,0:19:57.16:0,57,842	0/0:22,0:22:66.20:0,66,1019	0/0:24,0:24:72.25:0,72,1149	0/0:20,0:20:60.20:0,60,958	0/0:25,0:25:75.24:0,75,1140	0/0:18,0:18:54.14:0,54,791	0/0:9,0:9:27.07:0,27,407
chr10	96319590	.	C	CA	2850.90	PASS	AB=0.703;AC=42;AF=0.750;AN=56;BaseQRankSum=-0.401;DP=534;FS=10.468;HRun=14;HaplotypeScore=85.8061;InbreedingCoeff=0.1668;MQ=55.20;MQ0=18;MQRankSum=-0.206;QD=6.09;ReadPosRankSum=-1.511;VQSLOD=1.4312;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,15:24:10.33:152,0,10	1/1:5,2:11:17.39:114,17,0	0/1:10,1:9:10.09:10,0,34	0/0:17,0:14:6.59:0,7,70	1/1:6,1:23:15.80:152,16,0	1/1:7,11:19:0.70:141,1,0	1/1:10,8:17:14.13:231,14,0	1/1:25,0:25:25.85:140,26,0	0/1:7,7:12:1.27:114,0,1	1/1:13,7:19:1.73:140,2,0	0/1:13,8:22:14.61:115,0,15	0/1:5,8:13:10.29:37,0,10	1/1:11,3:16:8.84:67,9,0	0/1:3,4:8:0.69:102,0,1	1/1:7,1:14:9.11:49,9,0	1/1:7,8:16:1.57:125,2,0	0/0:20,0:21:28.85:0,29,154	0/0:23,1:26:8.62:0,9,253	1/1:9,4:14:20.51:145,21,0	1/1:12,5:28:34.86:214,35,0	1/1:10,0:18:14.20:71,14,0	0/1:20,6:26:35.53:80,0,36	1/1:10,9:19:10.57:206,11,0	0/1:12,12:25:18.95:144,0,19	1/1:8,0:13:10.36:65,10,0	1/1:16,2:24:28.04:181,28,0	1/1:9,3:16:23.79:156,24,0	1/1:7,0:10:11.36:57,11,0
chr10	96320933	.	CT	C	1255.68	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.295;DP=635;FS=1.966;HRun=7;HaplotypeScore=62.3106;InbreedingCoeff=0.9972;MQ=80.92;MQ0=0;MQRankSum=-2.300;QD=23.69;ReadPosRankSum=2.356;VQSLOD=3.9455;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,1283	0/0:8,0:8:24.08:0,24,300	0/0:22,0:22:63.15:0,63,757	0/0:11,0:11:25.87:0,26,241	0/0:33,0:32:99:0,99,1226	0/0:20,0:20:60.18:0,60,742	0/0:23,0:23:63.20:0,63,792	0/0:23,0:23:66.21:0,66,829	0/0:24,0:24:63.18:0,63,767	0/0:23,0:23:69.21:0,69,854	0/0:18,0:18:54.17:0,54,678	0/0:19,0:19:54.17:0,54,678	0/0:19,0:19:57.18:0,57,717	0/0:18,0:18:51.15:0,51,628	0/0:30,0:30:87.28:0,87,1093	0/0:19,0:19:54.17:0,54,679	1/1:3,27:30:69.15:704,69,0	1/1:0,23:23:66.15:673,66,0	0/0:24,0:24:66.21:0,66,827	0/0:18,0:18:48.15:0,48,593	0/0:27,0:27:75.24:0,75,942	0/0:20,0:20:60.18:0,60,742	0/0:26,0:26:72.23:0,72,906	0/0:23,0:23:63.20:0,63,793	0/0:24,0:24:72.23:0,72,906	0/0:26,0:26:75.23:0,75,931	0/0:38,0:38:99:0,111,1383	0/0:8,0:8:24.08:0,24,302
chr10	96321143	.	GC	G	1178.30	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.060;DP=491;FS=1.533;HRun=1;HaplotypeScore=70.7544;InbreedingCoeff=0.9386;MQ=74.65;MQ0=3;MQRankSum=-2.691;QD=35.71;ReadPosRankSum=1.456;VQSLOD=3.9047;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,135,2152	0/0:2,0:2:6.02:0,6,96	0/0:13,0:13:34.19:0,34,456	0/0:11,0:10:23.27:0,23,298	0/0:24,0:24:69.21:0,69,1057	0/0:22,0:22:66.19:0,66,999	0/0:15,0:15:45.15:0,45,720	0/0:28,0:28:81.26:0,81,1271	0/0:22,0:21:57.18:0,57,888	0/0:23,0:23:69.24:0,69,1104	0/0:20,0:20:60.20:0,60,951	0/0:8,0:8:18.06:0,18,288	0/0:17,0:17:45.13:0,45,688	0/0:12,0:12:36.11:0,36,553	0/0:12,0:12:26.99:0,27,432	0/0:18,0:18:51.17:0,51,815	1/1:0,16:16:48.16:671,48,0	1/1:0,17:16:45.15:629,45,0	0/0:10,0:9:27.09:0,27,431	0/0:15,0:15:45.15:0,45,719	0/0:24,0:24:60.19:0,60,936	0/0:13,0:13:36.12:0,36,576	0/0:16,0:16:38.80:0,39,623	0/0:19,0:19:57.19:0,57,905	0/0:13,0:13:39.12:0,39,601	0/0:22,0:22:66.23:0,66,1053	0/0:25,0:24:69.24:0,69,1103	0/0:6,0:6:18.06:0,18,288
chr10	96321182	.	T	TAA	9341.72	PASS	AB=0.710;AC=47;AF=0.839;AN=56;BaseQRankSum=-8.666;DP=492;FS=11.288;HRun=10;HaplotypeScore=79.6273;InbreedingCoeff=0.6220;MQ=65.91;MQ0=3;MQRankSum=-0.633;QD=21.93;ReadPosRankSum=-2.110;VQSLOD=2.6238;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:37:65.45:0,65,354	1/1:0,7:7:8.99:109,9,0	0/0:16,0:17:11.09:0,11,241	0/0:12,0:9:11.96:0,12,117	1/1:5,23:28:63.07:863,63,0	1/1:4,17:21:42.14:626,42,0	1/1:3,15:19:29.59:412,30,0	1/1:8,1:35:62.55:306,63,0	1/1:3,16:20:6.86:379,7,0	1/1:5,14:21:47.56:545,48,0	1/1:4,12:16:33.03:442,33,0	1/1:5,8:13:9.87:111,10,0	1/1:0,14:14:30.10:448,30,0	1/1:4,6:12:25.27:303,25,0	1/1:3,12:15:24.04:333,24,0	0/1:2,0:17:6.24:6,0,115	1/1:11,0:18:33.48:299,33,0	1/1:5,1:11:18.03:187,18,0	0/1:4,8:13:3.43:314,0,3	1/1:2,13:15:39.02:508,39,0	1/1:0,17:20:35.09:464,35,0	1/1:2,10:13:29.93:347,30,0	1/1:3,15:19:26.58:367,27,0	1/1:0,8:10:20.50:233,21,0	0/1:2,9:12:3.91:295,0,4	1/1:2,18:20:54.11:721,54,0	1/1:5,21:27:49.90:688,50,0	1/1:1,0:6:9.86:35,10,0
chr10	96321302	.	T	TAA	1486	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.760;DP=581;FS=0.619;HRun=9;HaplotypeScore=73.0105;InbreedingCoeff=0.9759;MQ=76.72;MQ0=0;MQRankSum=0.571;QD=28.58;ReadPosRankSum=2.440;VQSLOD=3.8716;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:37:74.73:1099,75,0	0/0:11,0:11:30.07:0,30,319	0/0:21,0:21:35.96:0,36,365	0/0:9,0:9:11.34:0,11,84	0/0:20,0:20:51.08:0,51,532	0/0:24,0:25:68.90:0,69,714	0/0:26,0:26:72.16:0,72,758	0/0:34,0:35:86.28:0,86,876	0/0:16,0:17:47.79:0,48,470	0/0:34,0:34:93.22:0,93,990	0/0:20,0:20:60.15:0,60,639	0/0:18,0:18:16.85:0,17,390	0/0:17,0:17:39.04:0,39,405	0/0:14,0:14:39.07:0,39,407	0/0:20,0:20:51.12:0,51,543	1/1:1,14:15:33.11:508,33,0	0/0:24,0:23:63.11:0,63,658	0/0:24,0:24:63.14:0,63,670	0/0:15,0:15:42.08:0,42,441	0/0:25,0:24:66.16:0,66,701	0/0:14,0:14:42.11:0,42,447	0/0:17,0:17:48.12:0,48,511	0/0:26,0:26:69.15:0,69,734	0/0:16,0:16:45.10:0,45,479	0/0:15,0:15:42.08:0,42,436	0/0:25,0:25:56.97:0,57,583	0/0:28,0:28:75.15:0,75,789	0/0:13,0:13:33.05:0,33,351
chr10	96321698	.	CAA	C	2079.13	PASS	AB=0.684;AC=29;AF=0.518;AN=56;BaseQRankSum=-0.470;DP=538;FS=0.863;HRun=17;HaplotypeScore=98.5403;InbreedingCoeff=0.3341;MQ=53.09;MQ0=11;MQRankSum=0.663;QD=6.38;ReadPosRankSum=3.349;VQSLOD=0.1847;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,4:40:26.49:26,0,291	0/1:6,1:8:12.88:13,0,44	0/0:20,0:6:8.92:0,9,72	0/0:22,0:12:8.01:0,8,147	0/1:9,3:21:37.51:38,0,180	1/1:3,9:12:23.83:190,24,0	1/1:2,8:11:26.90:209,27,0	0/0:20,0:27:45.01:0,45,462	1/1:6,4:12:20.60:150,21,0	1/1:4,9:18:23:232,23,0	1/1:4,14:18:22.70:278,23,0	1/1:5,8:14:23.59:178,24,0	1/1:6,6:12:17.77:141,18,0	0/1:5,3:9:0.39:39,0,0	0/0:3,0:11:17.95:0,18,100	0/1:8,3:18:42.49:42,0,54	0/0:36,1:40:68.05:0,68,817	0/0:23,1:29:43.34:0,43,600	0/1:13,2:16:20.09:20,0,109	0/1:7,2:14:29.45:29,0,69	0/1:5,2:13:25.32:25,0,92	1/1:6,14:24:22.12:304,22,0	1/1:9,9:22:29.03:229,29,0	1/1:7,10:15:14.66:118,15,0	0/0:7,1:12:1.89:0,2,144	0/1:10,2:18:12.32:12,0,149	0/0:12,1:26:8.45:0,8,105	0/0:17,0:15:31.24:0,31,311
chr10	96322613	.	TAA	T	8547.50	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-6.686;DP=607;FS=12.598;HRun=12;HaplotypeScore=90.8126;InbreedingCoeff=0.9427;MQ=76.11;MQ0=6;MQRankSum=3.025;QD=21.16;ReadPosRankSum=4.356;VQSLOD=2.9195;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,1:29:1.80:0,2,214	1/1:1,4:5:6:61,6,0	0/0:32,0:26:39.38:0,39,467	0/0:28,0:20:37.39:0,37,336	1/1:6,15:22:47.72:454,48,0	1/1:2,8:10:23.77:225,24,0	1/1:1,10:10:27.06:275,27,0	0/0:25,0:26:51.15:0,51,722	1/1:5,16:21:33.06:335,33,0	1/1:7,23:30:63.08:634,63,0	1/1:3,15:18:41.04:411,41,0	1/1:1,20:21:48.10:487,48,0	1/1:3,7:9:18.03:183,18,0	1/1:2,9:10:18.01:182,18,0	1/1:4,20:23:48.09:488,48,0	0/0:3,0:20:37.43:0,37,131	0/0:4,0:26:46.38:0,46,200	0/0:4,0:17:30.46:0,30,141	1/1:3,20:22:57.07:561,57,0	1/1:3,28:31:75.11:762,75,0	1/1:1,29:30:69.15:701,69,0	1/1:3,9:12:22.79:241,23,0	1/1:6,19:25:53.89:531,54,0	1/1:2,20:21:45.08:458,45,0	1/1:1,20:21:56.87:561,57,0	1/1:3,20:24:53.85:601,54,0	1/1:10,19:29:20.83:398,21,0	0/0:13,0:13:33.07:0,33,434
chr10	96322809	.	TA	T	679.44	PASS	AB=0.764;AC=15;AF=0.278;AN=54;BaseQRankSum=2.734;DP=328;FS=12.419;HRun=9;HaplotypeScore=39.2429;InbreedingCoeff=0.5645;MQ=57.20;MQ0=46;MQRankSum=-2.771;QD=6.66;ReadPosRankSum=2.684;VQSLOD=0.0269;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:8:14.09:0,14,73	1/1:2,3:4:3:27,3,0	0/0:34,0:17:13.17:0,13,222	0/0:14,0:2:6.02:0,6,67	0/1:7,6:10:19.58:92,0,20	0/1:15,1:13:3.33:3,0,193	0/0:7,0:3:3.01:0,3,35	0/0:28,0:25:66.03:0,66,725	0/0:15,0:13:15.12:0,15,202	0/0:12,0:9:18.05:0,18,207	0/0:8,0:7:12.04:0,12,138	0/0:9,0:7:12.04:0,12,138	0/0:8,0:6:12.04:0,12,138	0/0:9,0:6:15.04:0,15,173	0/1:7,7:10:15.33:118,0,15	0/0:9,0:14:15.44:0,15,89	0/0:2,0:3:2.96:0,3,19	0/0:5,0:7:17.15:0,17,90	1/1:4,3:5:9:81,9,0	1/1:1,8:8:15.01:134,15,0	./.	0/0:8,0:6:11.02:0,11,122	0/0:10,0:8:21.02:0,21,227	0/0:6,0:4:6.02:0,6,66	1/1:4,9:8:12.01:108,12,0	1/1:3,10:12:24.01:217,24,0	1/1:4,7:7:8.90:70,9,0	0/0:7,0:7:21.05:0,21,233
chr10	96322930	.	A	AAC	340.40	PASS	AB=0.941;AC=4;AF=0.182;AN=22;BaseQRankSum=-1.382;DP=228;FS=3.254;HRun=0;HaplotypeScore=44.1744;InbreedingCoeff=0.2904;MQ=22.09;MQ0=60;MQRankSum=1.245;QD=7.24;ReadPosRankSum=1.039;VQSLOD=2.4926;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:4:0.18:0,0,3	./.	0/0:38,0:5:12.85:0,13,121	0/0:53,0:8:14.01:0,14,93	0/0:12,0:11:0:0,0,0	./.	./.	0/1:26,4:23:14.26:306,0,14	./.	./.	./.	./.	./.	./.	0/0:1,0:1:2.84:0,3,14	0/0:8,0:6:8.27:0,8,34	0/0:10,0:5:4.07:0,4,34	0/0:9,0:3:3.01:0,3,38	./.	./.	./.	./.	./.	./.	./.	0/0:9,0:4:5.39:0,5,23	./.	1/1:5,1:6:11.77:119,12,0
chr10	96322938	.	C	CA	1452.73	PASS	AB=1.000;AC=41;AF=0.854;AN=48;BaseQRankSum=2.110;DP=332;FS=0.000;HRun=20;HaplotypeScore=109.9591;InbreedingCoeff=0.4680;MQ=27.01;MQ0=50;MQRankSum=2.587;QD=5.98;ReadPosRankSum=-0.669;VQSLOD=1.1984;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:4:4.41:14,4,0	1/1:7,0:6:8.79:29,9,0	0/0:43,0:7:5.13:0,5,71	0/1:58,0:8:11.41:11,0,25	./.	1/1:4,0:4:8.39:39,8,0	1/1:6,0:5:13.72:62,14,0	1/1:16,11:21:38.23:409,38,0	1/1:8,0:6:13.91:65,14,0	1/1:11,0:10:24.54:113,25,0	1/1:15,0:13:30.78:147,31,0	1/1:5,0:5:14.33:77,14,0	1/1:8,0:6:13.89:66,14,0	1/1:8,0:8:14.02:73,14,0	1/1:7,0:7:8.27:27,8,0	1/1:10,0:8:4.93:16,5,0	0/0:8,0:5:6.07:0,6,37	0/0:7,0:4:2.95:0,3,20	1/1:4,0:1:2.60:10,3,0	./.	./.	./.	1/1:6,0:6:12.95:61,13,0	1/1:6,0:4:5.65:28,6,0	1/1:10,0:10:15.49:49,15,0	1/1:12,0:7:2.88:15,3,0	1/1:13,0:10:18.26:59,18,0	1/1:5,4:8:18.05:207,18,0
chr10	96322946	.	ACAAAAAAACC	A	4002.01	PASS	AB=0.667;AC=45;AF=0.833;AN=54;BaseQRankSum=-5.399;DP=373;FS=5.292;HRun=0;HaplotypeScore=84.7261;InbreedingCoeff=0.6677;MQ=35.68;MQ0=50;MQRankSum=-1.230;QD=17.95;ReadPosRankSum=2.277;VQSLOD=1.6406;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:5:9.85:72,10,0	1/1:7,0:6:18.06:340,18,0	0/0:50,0:12:25.65:0,26,254	0/0:60,0:8:14.67:0,15,137	1/1:2,14:14:9.03:129,9,0	1/1:8,0:7:15.06:69,15,0	1/1:8,0:7:13.74:49,14,0	0/0:28,0:22:38.39:0,38,312	1/1:9,0:7:14.70:61,15,0	1/1:14,0:13:24.92:118,25,0	1/1:18,0:16:32.33:154,32,0	1/1:7,0:7:17.54:82,18,0	1/1:9,0:7:16.74:69,17,0	1/1:9,0:9:18.60:133,19,0	1/1:10,0:10:21.07:407,21,0	1/1:4,0:7:15:136,15,0	1/1:6,0:5:2.52:12,3,0	1/1:10,0:6:5.68:40,6,0	1/1:5,0:2:6.02:123,6,0	1/1:0,14:14:6.02:83,6,0	1/1:3,0:3:9.03:185,9,0	./.	1/1:6,0:6:9.50:29,10,0	1/1:6,0:4:4.87:16,5,0	1/1:13,0:13:39.13:751,39,0	0/1:7,7:9:19.90:307,0,20	1/1:14,0:11:33.11:636,33,0	0/0:9,0:8:14.84:0,15,418
chr10	96322949	.	AAAAAAC	A	397.13	PASS	AB=0.975;AC=19;AF=0.352;AN=54;BaseQRankSum=5.333;DP=385;FS=14.895;HRun=0;HaplotypeScore=85.7486;InbreedingCoeff=0.5767;MQ=38.38;MQ0=46;MQRankSum=-0.442;QD=3.45;ReadPosRankSum=1.828;VQSLOD=0.7309;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:6,1:5:0.61:82,0,1	1/1:7,0:6:9.02:23,9,0	0/0:56,0:15:37.20:0,37,400	0/0:64,0:10:20.97:0,21,256	0/1:16,0:14:0.06:14,0,0	0/0:11,0:10:18.26:0,18,124	0/0:8,0:7:17.93:0,18,139	0/0:29,0:23:37.99:0,38,439	0/0:8,0:7:17.83:0,18,129	0/0:15,0:14:21.59:0,22,243	0/0:17,0:16:41.33:0,41,299	0/0:8,0:8:17.58:0,18,130	0/0:9,0:7:20.82:0,21,156	0/0:9,0:9:10.95:0,11,101	1/1:10,0:10:12.34:37,12,0	1/1:6,6:9:14.49:160,14,0	0/1:6,0:5:26.72:33,0,27	0/1:9,0:6:31.98:60,0,32	1/1:5,0:2:4.56:17,5,0	0/0:14,0:14:0.72:0,1,3	1/1:3,0:3:6.91:26,7,0	./.	0/0:7,0:7:14.33:0,14,116	0/0:6,0:4:5.98:0,6,47	1/1:13,0:13:19.55:63,20,0	0/1:13,0:9:10.80:11,0,51	1/1:14,0:11:19.66:55,20,0	0/0:9,0:8:16.78:0,17,310
chr10	96322950	.	AAAAAC	A	254.09	PASS	AB=0.861;AC=8;AF=0.148;AN=54;BaseQRankSum=3.619;DP=387;FS=2.475;HRun=0;HaplotypeScore=83.6413;InbreedingCoeff=0.4034;MQ=38.58;MQ0=44;MQRankSum=-1.410;QD=4.03;ReadPosRankSum=-0.020;VQSLOD=1.8195;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,1:5:7.01:72,7,0	0/0:7,0:6:16.14:0,16,68	0/0:55,0:15:30.20:0,30,400	0/0:65,0:11:20.96:0,21,261	0/1:16,0:14:4.55:13,0,5	0/0:11,0:10:19.41:0,19,189	0/0:8,0:7:18.05:0,18,207	0/0:29,0:23:53.65:0,54,529	0/0:8,0:7:18.03:0,18,194	0/0:17,0:16:37.51:0,38,418	0/0:16,0:16:41.70:0,42,427	0/0:8,0:8:17.81:0,18,186	0/0:8,0:7:21.06:0,21,236	0/0:9,0:9:17.07:0,17,171	0/0:10,0:10:17.54:0,18,71	1/1:12,0:9:14.07:150,14,0	0/1:4,2:5:10.38:74,0,10	0/1:5,4:6:32.32:74,0,32	0/0:6,0:2:4.23:0,4,14	0/0:14,0:14:0.82:0,1,3	0/0:3,0:3:2.99:0,3,8	./.	0/0:7,0:7:14.92:0,15,172	0/0:7,0:5:8.24:0,8,75	0/0:13,0:13:31.81:0,32,134	0/1:13,0:9:3.13:3,0,47	0/0:14,0:11:28.61:0,29,115	0/0:9,0:8:17.32:0,17,284
chr10	96322954	.	AC	A	1981.50	PASS	AB=0.968;AC=32;AF=0.593;AN=54;BaseQRankSum=-4.348;DP=381;FS=0.000;HRun=3;HaplotypeScore=61.0020;InbreedingCoeff=0.4696;MQ=42.04;MQ0=35;MQRankSum=1.261;QD=9.86;ReadPosRankSum=-1.794;VQSLOD=0.3818;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:4:7.73:49,8,0	1/1:1,6:6:18.06:220,18,0	0/0:55,0:16:5.05:0,5,168	0/0:65,0:12:25.94:0,26,200	1/1:15,0:14:8.89:72,9,0	0/1:10,0:10:47.91:48,0,49	0/0:9,0:8:1.40:0,1,74	0/1:23,0:19:9.15:9,0,102	0/0:10,0:9:1:0,1,67	0/1:17,0:16:1.59:2,0,130	0/0:17,0:17:8.66:0,9,165	0/1:8,0:8:0.25:0,0,67	0/0:9,0:8:19.73:0,20,102	0/1:7,1:8:1.52:2,0,55	1/1:0,11:11:21.07:257,21,0	1/1:11,0:9:17.49:113,17,0	1/1:3,0:4:6.60:34,7,0	1/1:8,0:5:5.57:31,6,0	1/1:5,3:4:11.93:112,12,0	1/1:14,0:14:5.88:51,6,0	1/1:1,4:5:9.03:111,9,0	./.	0/0:7,0:7:13.10:0,13,78	0/1:4,0:4:9.73:10,0,24	1/1:0,13:13:39.12:477,39,0	1/1:13,0:9:6.69:159,7,0	1/1:0,15:13:33.10:403,33,0	0/0:8,0:7:16.37:0,16,74
chr10	96323578	.	C	CT	6916.30	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=2.852;DP=520;FS=6.022;HRun=2;HaplotypeScore=86.6068;InbreedingCoeff=0.0500;MQ=72.65;MQ0=9;MQRankSum=-2.950;QD=14.94;ReadPosRankSum=7.442;VQSLOD=4.3194;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:46,0:46:86.16:820,86,0	0/1:13,0:13:26.93:27,0,48	0/0:37,0:14:25.91:0,26,250	0/1:22,0:14:1.34:1,0,154	0/1:14,0:14:14.52:15,0,76	1/1:0,22:22:57.18:759,57,0	1/1:4,9:13:17.96:204,18,0	0/1:18,0:18:11.79:12,0,96	1/1:3,8:11:15.05:198,15,0	1/1:8,15:22:53.21:615,53,0	1/1:3,17:20:50.64:520,51,0	1/1:7,8:15:20.84:211,21,0	1/1:4,5:9:26.47:250,26,0	1/1:2,11:13:23.93:273,24,0	0/1:19,0:19:22.39:22,0,92	1/1:19,0:18:45.08:444,45,0	1/1:2,24:26:42.14:600,42,0	1/1:1,26:27:66.15:911,66,0	0/0:19,0:18:2.24:0,2,135	0/1:16,0:16:42.01:56,0,42	0/1:11,0:11:10.72:11,0,58	1/1:2,9:11:27.01:321,27,0	1/1:3,4:7:8.99:96,9,0	1/1:6,12:18:36.04:435,36,0	0/1:15,0:15:17.77:37,0,18	0/1:25,0:25:23.36:23,0,76	0/1:17,0:17:27.72:28,0,50	1/1:13,0:13:1.10:28,1,0
chr10	96323580	.	T	TA	6449.62	PASS	AB=0.969;AC=50;AF=0.893;AN=56;BaseQRankSum=-4.661;DP=560;FS=2.408;HRun=11;HaplotypeScore=104.2485;InbreedingCoeff=0.2473;MQ=72.19;MQ0=9;MQRankSum=0.331;QD=12.43;ReadPosRankSum=5.741;VQSLOD=4.7169;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:49:87.77:529,88,0	1/1:3,12:15:26.95:250,27,0	0/0:40,0:16:11.81:0,12,86	0/1:26,0:14:3.46:3,0,75	1/1:4,12:16:34.22:315,34,0	1/1:23,0:23:56.67:337,57,0	1/1:12,0:12:13.13:79,13,0	1/1:9,14:22:45.43:421,45,0	1/1:10,0:10:3.25:75,3,0	1/1:26,0:26:7.01:165,7,0	0/1:22,0:22:9.97:143,0,10	0/1:12,0:14:8.15:38,0,8	1/1:10,0:10:3.52:107,4,0	1/1:12,0:13:19.61:124,20,0	1/1:5,16:21:39.08:396,39,0	1/1:0,0:19:43.89:259,44,0	1/1:25,0:25:8.79:227,9,0	1/1:27,0:27:41.45:354,41,0	1/1:8,13:19:14.63:315,15,0	1/1:4,13:17:42.01:405,42,0	1/1:4,7:11:18.04:183,18,0	1/1:15,0:15:12.21:132,12,0	0/1:11,0:11:15.25:29,0,15	1/1:16,0:18:16.94:161,17,0	1/1:2,16:18:7.29:252,7,0	1/1:5,21:26:56.82:546,57,0	1/1:3,14:17:30.06:305,30,0	1/1:1,9:12:32.81:301,33,0
chr10	96323590	.	AAG	A	1461.79	PASS	AB=0.970;AC=21;AF=0.375;AN=56;BaseQRankSum=5.987;DP=557;FS=33.383;HRun=0;HaplotypeScore=121.9047;InbreedingCoeff=0.7803;MQ=68.52;MQ0=10;MQRankSum=-0.957;QD=6.93;ReadPosRankSum=-3.093;VQSLOD=1.2353;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,108,1127	0/0:13,0:13:26.99:0,27,276	0/0:44,0:17:21.85:0,22,308	0/0:27,0:11:13.70:0,14,177	0/0:17,0:17:21.45:0,21,411	1/1:22,0:22:21.89:162,22,0	1/1:11,1:12:8.06:118,8,0	0/0:25,0:24:51.34:0,51,488	0/1:9,1:10:0.78:74,0,1	1/1:24,5:28:54.90:387,55,0	1/1:25,1:26:9.31:259,9,0	1/1:13,1:14:7.37:90,7,0	1/1:8,1:9:14.93:96,15,0	1/1:13,1:14:8.70:90,9,0	0/0:17,0:17:41.96:0,42,374	0/0:19,0:18:47.20:0,47,494	0/0:21,0:21:56.62:0,57,668	0/0:27,0:27:74.76:0,75,851	0/0:19,0:17:30.24:0,30,397	0/0:17,0:17:50.49:0,50,438	0/0:9,0:9:24:0,24,234	1/1:20,0:20:9.17:161,9,0	0/1:15,0:15:13.04:93,0,13	1/1:16,0:16:14.66:130,15,0	0/0:19,0:19:31.74:0,32,311	0/1:24,0:24:1.76:2,0,459	0/0:14,0:14:30:0,30,275	0/0:14,0:14:39:0,39,352
chr10	96324409	.	T	TCTC	1258.64	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=2.256;DP=369;FS=0.000;HRun=0;HaplotypeScore=92.0020;InbreedingCoeff=0.3440;MQ=54.35;MQ0=22;MQRankSum=-3.593;QD=5.52;ReadPosRankSum=-0.343;VQSLOD=2.2478;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,9:21:21.07:383,21,0	1/1:7,0:7:9.15:66,9,0	0/0:27,0:12:3.01:0,3,41	0/0:27,0:8:2.02:0,2,19	1/1:8,0:8:2.97:20,3,0	0/1:9,0:7:3.74:4,0,15	0/1:15,0:15:26.68:27,0,27	0/0:29,0:25:28.73:0,29,434	1/1:11,0:11:3.70:161,4,0	1/1:4,0:4:6.86:64,7,0	0/1:7,0:7:3.08:3,0,19	1/1:5,0:4:3:25,3,0	0/1:9,0:9:7.84:20,0,8	1/1:8,0:8:5.87:35,6,0	1/1:13,0:12:8.64:56,9,0	1/1:8,5:12:8.45:138,8,0	0/0:20,0:18:42.12:0,42,563	0/0:11,0:10:18.06:0,18,258	1/1:10,0:9:2.64:12,3,0	1/1:12,0:10:6.89:50,7,0	1/1:14,0:11:9.01:92,9,0	0/1:9,0:5:14.15:14,0,41	0/1:7,0:5:5.78:6,0,31	0/0:15,0:12:0.89:0,1,2	1/1:14,0:12:5.38:53,5,0	1/1:24,0:23:9.31:114,9,0	1/1:8,0:8:11.77:88,12,0	0/0:12,0:11:18.06:0,18,250
chr10	96324428	.	CCCT	C	1832.71	PASS	AB=0.890;AC=41;AF=0.732;AN=56;BaseQRankSum=4.555;DP=301;FS=3.248;HRun=0;HaplotypeScore=71.4444;InbreedingCoeff=0.4093;MQ=49.43;MQ0=26;MQRankSum=-6.582;QD=8.29;ReadPosRankSum=-1.263;VQSLOD=1.9952;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,2:15:52.42:90,0,52	1/1:7,0:7:16.09:106,16,0	0/0:26,0:6:9.29:0,9,131	0/1:52,0:10:5.65:6,0,146	1/1:1,4:5:3.01:37,3,0	1/1:7,0:5:3.26:15,3,0	0/1:5,4:9:30.03:176,0,30	0/0:21,0:19:44.05:0,44,1047	1/1:3,3:7:18.01:215,18,0	1/1:4,0:4:8.47:71,8,0	1/1:8,1:8:12.82:97,13,0	1/1:3,0:2:3:25,3,0	1/1:4,1:5:5.80:67,6,0	1/1:0,4:4:9.03:106,9,0	1/1:8,3:10:20.88:190,21,0	0/1:9,0:8:13.72:14,0,18	0/0:17,0:16:42.12:0,42,862	0/0:7,0:6:18.06:0,18,442	1/1:4,0:3:7.46:48,7,0	0/1:6,1:5:0.91:76,0,1	1/1:9,0:6:8.93:100,9,0	1/1:8,0:4:1.81:35,2,0	1/1:5,0:3:8.22:39,8,0	1/1:3,6:6:2.80:13,3,0	1/1:13,0:10:16.86:129,17,0	1/1:12,1:13:25.57:203,26,0	1/1:5,1:6:17.86:150,18,0	0/0:9,0:8:21.07:0,21,479
chr10	96324435	.	CCCT	C	58.07	PASS	AB=0.931;AC=17;AF=0.327;AN=52;BaseQRankSum=3.191;DP=285;FS=0.000;HRun=0;HaplotypeScore=86.0234;InbreedingCoeff=0.1318;MQ=51.21;MQ0=19;MQRankSum=-4.051;QD=0.65;ReadPosRankSum=0.499;VQSLOD=1.5781;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:23.44:0,23,349	0/1:3,1:4:13.09:28,0,13	0/0:30,0:5:3.01:0,3,64	0/0:60,0:12:20.87:0,21,360	1/1:7,0:7:1.54:13,2,0	0/1:6,0:5:0.08:0,0,36	1/1:9,0:9:1.15:3,1,0	0/0:21,0:20:36.11:0,36,665	1/1:6,0:6:4.56:32,5,0	0/0:5,0:5:2.88:0,3,15	0/1:10,1:10:1.74:2,0,37	./.	0/0:4,0:4:6.45:0,6,61	./.	0/0:10,0:9:7.76:0,8,39	0/0:8,0:8:0.37:0,0,157	0/0:11,0:10:21.07:0,21,446	0/0:7,0:6:15.05:0,15,314	0/1:2,1:3:3.81:48,0,4	0/1:8,0:7:3.12:3,0,12	1/1:7,0:5:2.94:18,3,0	0/0:4,0:3:8.96:0,9,96	0/1:3,0:3:15.09:15,0,29	0/0:7,0:5:2.96:0,3,19	0/1:14,0:11:1.54:2,0,18	0/1:9,1:10:20.44:20,0,75	0/1:2,0:2:0:1,0,0	0/0:8,0:8:24.03:0,24,418
chr10	96324450	.	T	TC	554.70	PASS	AB=0.945;AC=19;AF=0.396;AN=48;BaseQRankSum=5.531;DP=236;FS=0.929;HRun=1;HaplotypeScore=94.1625;InbreedingCoeff=-0.0186;MQ=53.37;MQ0=14;MQRankSum=-4.975;QD=5.84;ReadPosRankSum=-2.058;VQSLOD=-0.2045;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:14.40:0,14,245	1/1:5,0:5:4.52:52,5,0	0/0:33,0:4:5.69:0,6,50	0/0:60,0:13:3.76:0,4,212	0/1:5,0:5:0.89:15,0,1	0/1:4,1:4:0.32:3,0,0	1/1:4,0:4:1.70:10,2,0	0/1:16,2:16:2.22:2,0,480	0/0:1,0:1:2.22:0,2,7	0/1:5,0:5:20.38:49,0,20	0/1:7,0:8:44:44,0,53	./.	./.	./.	0/1:5,0:4:3.11:62,0,3	0/0:7,0:7:12.81:0,13,171	0/0:8,0:8:21.07:0,21,273	0/0:7,0:6:12:0,12,137	0/1:4,0:3:20.72:21,0,23	0/1:6,2:8:17.89:158,0,18	0/1:5,0:5:12.21:32,0,12	1/1:2,0:2:3.01:40,3,0	0/0:5,0:5:2.97:0,3,39	./.	0/1:11,2:12:71.73:138,0,72	0/1:6,0:6:47.71:55,0,48	1/1:1,0:1:2.60:10,3,0	0/0:7,0:7:15.05:0,15,199
chr10	96324451	.	CTT	C	660.90	PASS	AB=0.767;AC=15;AF=0.313;AN=48;BaseQRankSum=3.879;DP=234;FS=6.848;HRun=2;HaplotypeScore=88.4907;InbreedingCoeff=0.0513;MQ=53.46;MQ0=14;MQRankSum=-4.953;QD=10.17;ReadPosRankSum=-0.893;VQSLOD=0.0449;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:12.37:0,12,364	0/1:4,1:5:22.61:23,0,54	0/0:33,0:4:5.60:0,6,71	0/0:58,1:12:18.18:0,18,339	1/1:4,1:5:5.96:20,6,0	0/0:4,1:4:5.35:0,5,29	1/1:3,1:4:5.90:36,6,0	0/0:19,0:16:36.98:0,37,804	0/0:1,0:1:2.04:0,2,6	0/1:5,1:5:43.18:70,0,43	0/1:4,3:7:63.10:78,0,63	./.	./.	./.	1/1:3,2:4:2.41:80,2,0	0/0:7,0:7:1.05:0,1,222	0/0:8,0:8:21.07:0,21,423	0/0:7,0:6:14.22:0,14,210	0/1:3,1:3:32.93:40,0,33	0/1:4,4:8:27.13:189,0,27	0/0:4,1:5:4.89:0,5,38	1/1:0,2:2:3.01:40,3,0	0/0:3,1:4:5.90:0,6,57	./.	0/1:9,4:12:24.15:157,0,24	0/1:4,2:6:63.30:69,0,63	0/0:1,0:1:2.98:0,3,22	0/0:7,0:7:19.79:0,20,325
chr10	96324453	.	TCTC	T	356.73	PASS	AB=0.831;AC=18;AF=0.391;AN=46;BaseQRankSum=3.141;DP=245;FS=17.234;HRun=0;HaplotypeScore=96.0403;InbreedingCoeff=0.1850;MQ=52.37;MQ0=14;MQRankSum=-4.960;QD=4.52;ReadPosRankSum=-1.663;VQSLOD=0.3151;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:11:17.25:0,17,291	0/1:5,1:6:6.80:7,0,36	0/0:31,0:4:3.45:0,3,22	0/0:60,0:12:14.65:0,15,262	1/1:4,1:5:4.17:40,4,0	1/1:5,0:4:1.43:5,1,0	0/0:4,0:4:2.22:0,2,7	0/0:20,0:16:40.67:0,41,755	./.	0/0:6,0:5:6.92:0,7,30	1/1:6,1:7:1.77:17,2,0	./.	./.	./.	0/1:3,2:4:7.16:28,0,7	0/1:6,0:8:77.64:78,0,180	0/0:9,0:9:18.04:0,18,319	0/0:5,0:4:12.03:0,12,188	0/1:6,1:5:13.39:63,0,13	0/1:8,0:8:19.52:50,0,20	0/0:3,1:4:4.56:0,5,32	0/0:3,0:2:2.37:0,2,8	1/1:4,1:5:3.56:10,4,0	./.	0/1:9,5:13:1.72:151,0,2	1/1:8,0:8:2.34:39,2,0	1/1:1,0:1:0.89:2,1,0	0/0:9,0:9:11.07:0,11,348
chr10	96324468	.	TCTC	T	694.41	PASS	AB=0.962;AC=20;AF=0.435;AN=46;BaseQRankSum=0.278;DP=283;FS=1.105;HRun=0;HaplotypeScore=99.0580;InbreedingCoeff=0.0496;MQ=38.30;MQ0=33;MQRankSum=1.723;QD=4.34;ReadPosRankSum=3.087;VQSLOD=1.3878;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,2:10:28.90:31,0,29	0/1:10,0:10:7.72:46,0,8	./.	./.	0/0:10,0:9:3.48:0,3,31	1/1:3,0:4:0.74:4,1,0	0/0:6,0:6:2.31:0,2,33	1/1:22,0:15:30.02:352,30,0	0/0:4,0:4:7.13:0,7,50	0/1:12,0:10:6.58:7,0,102	0/0:7,0:6:5.17:0,5,21	./.	./.	./.	0/1:8,0:6:0.30:1,0,0	0/1:9,2:10:0.48:78,0,0	0/0:7,0:6:6:0,6,72	0/0:4,0:3:6.02:0,6,79	0/0:12,0:5:1.13:0,1,49	0/1:12,0:11:44.98:78,0,45	1/1:11,0:7:0.25:15,0,0	1/1:6,0:5:1.78:5,2,0	1/1:9,0:7:4.26:10,4,0	0/0:2,0:1:0:0,0,0	1/1:13,0:13:4.44:53,4,0	0/1:16,0:13:37:37,0,53	0/0:3,0:3:2.73:0,3,20	0/1:13,0:13:39.52:103,0,40
chr10	96325419	.	CAAA	C	3559.04	PASS	AB=0.952;AC=26;AF=0.464;AN=56;BaseQRankSum=-0.638;DP=457;FS=2.007;HRun=13;HaplotypeScore=155.7244;InbreedingCoeff=0.8073;MQ=43.72;MQ0=8;MQRankSum=-1.072;QD=17.45;ReadPosRankSum=8.449;VQSLOD=0.4563;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:19:36.82:0,37,425	0/0:6,0:7:12.61:0,13,127	0/0:17,0:5:3.01:0,3,58	0/0:21,0:11:5.94:0,6,45	0/0:27,0:27:24.32:0,24,291	1/1:16,2:18:41.47:340,41,0	1/1:6,8:14:30.01:313,30,0	1/1:17,3:20:23.43:331,23,0	1/1:10,6:16:41.77:359,42,0	1/1:6,6:12:27.05:312,27,0	1/1:9,6:14:26.99:294,27,0	1/1:11,5:16:35.58:309,36,0	1/1:8,3:10:26.88:249,27,0	1/1:6,4:11:13.47:232,13,0	0/0:25,0:25:27.82:0,28,529	0/0:16,0:17:28.45:0,28,415	0/0:12,0:14:22.65:0,23,109	0/0:10,0:12:17:0,17,102	0/0:17,0:18:35.13:0,35,394	0/0:16,0:17:39.75:0,40,457	0/0:6,0:6:6.34:0,6,27	1/1:13,4:17:29.85:281,30,0	1/1:10,7:17:38.85:350,39,0	1/1:9,3:12:16.36:165,16,0	0/0:23,0:22:45.03:0,45,573	0/1:17,0:17:1.77:2,0,282	0/0:16,0:16:5.76:0,6,481	0/1:5,0:5:21.40:21,0,111
chr10	96325420	.	AAAAAAAAAAAAACAAAAAC	A	10470.54	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-7.649;DP=460;FS=0.428;HRun=0;HaplotypeScore=269.2793;InbreedingCoeff=0.8469;MQ=42.59;MQ0=9;MQRankSum=-2.964;QD=59.83;ReadPosRankSum=9.212;VQSLOD=2.9582;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:19:41.03:0,41,997	0/0:9,0:9:19.34:0,19,787	0/0:18,0:5:3.01:0,3,134	0/0:21,0:10:5.97:0,6,44	0/0:29,0:27:51.98:0,52,1827	1/1:10,8:18:41.82:1514,42,0	1/1:13,0:13:30.04:671,30,0	0/1:21,0:20:42.55:43,0,278	1/1:12,4:16:42.11:1424,42,0	1/1:12,0:12:27.05:502,27,0	1/1:13,1:13:27.06:590,27,0	1/1:11,5:16:36.09:1201,36,0	1/1:7,4:10:27.06:859,27,0	1/1:7,3:10:15.24:783,15,0	0/0:27,0:27:56.61:0,57,2489	0/0:17,0:16:28.45:0,28,1601	0/0:17,0:15:25.83:0,26,704	0/0:13,0:12:20.20:0,20,397	0/0:20,0:18:40.53:0,41,1574	0/0:18,0:17:45.12:0,45,2198	0/0:6,0:6:8.44:0,8,47	1/1:12,4:16:30.05:909,30,0	1/1:12,5:17:39.10:1345,39,0	1/1:8,3:11:21:630,21,0	0/0:25,0:23:61.54:0,62,3048	0/0:21,0:18:8.27:0,8,1558	0/0:16,0:16:5.82:0,6,2378	0/0:5,0:5:14.82:0,15,131
chr10	96325427	.	A	AAAC	3413.93	PASS	AB=0.967;AC=17;AF=0.304;AN=56;BaseQRankSum=-7.118;DP=464;FS=2.586;HRun=0;HaplotypeScore=174.1573;InbreedingCoeff=0.0184;MQ=39.07;MQ0=12;MQRankSum=1.890;QD=17.97;ReadPosRankSum=5.069;VQSLOD=3.6846;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:21:12.42:0,12,234	0/0:8,0:8:19.08:0,19,161	0/0:15,0:1:3.01:0,3,46	0/0:22,0:5:5.72:0,6,44	0/0:30,0:28:46.65:0,47,290	0/1:14,1:15:99:220,0,104	1/1:12,0:12:30.05:474,30,0	0/1:20,0:18:80.06:80,0,118	0/1:14,1:15:41.80:364,0,42	1/1:10,1:11:27.06:396,27,0	1/1:10,1:10:21.73:358,22,0	0/1:14,0:14:87.78:247,0,88	0/1:10,0:10:41.83:173,0,42	0/1:10,0:10:19.33:243,0,19	0/0:25,0:25:31.89:0,32,299	0/1:17,0:16:4.49:4,0,118	0/0:22,0:20:32.42:0,32,188	0/0:14,0:13:31.72:0,32,191	0/0:31,0:28:43.02:0,43,367	0/0:18,0:16:5.77:0,6,219	0/0:5,0:5:6.34:0,6,27	0/1:11,0:11:42.86:242,0,43	0/1:14,0:14:56.26:381,0,56	0/1:9,1:11:19.51:166,0,20	0/0:28,0:25:16.54:0,17,290	0/0:25,0:22:13.41:0,13,278	0/1:18,0:17:64.93:65,0,208	0/0:5,0:5:6.04:0,6,107
chr10	96325429	.	A	AC	339.92	PASS	AB=0.955;AC=11;AF=0.196;AN=56;BaseQRankSum=-2.852;DP=469;FS=0.550;HRun=0;HaplotypeScore=172.6064;InbreedingCoeff=0.0669;MQ=38.71;MQ0=12;MQRankSum=-2.249;QD=3.09;ReadPosRankSum=2.990;VQSLOD=2.8579;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:24:53.37:0,53,360	0/0:8,0:8:23.77:0,24,168	0/0:15,0:1:3.01:0,3,42	0/0:22,0:5:5.84:0,6,42	0/0:30,0:28:56:0,56,337	0/1:15,0:15:28.02:28,0,47	1/1:11,0:11:6.38:53,6,0	0/1:16,5:19:75.25:222,0,75	0/1:15,0:15:21.80:22,0,34	0/1:10,0:10:10.01:53,0,10	1/1:11,0:10:1.19:30,1,0	0/0:14,0:14:13.68:0,14,70	0/1:10,0:9:20.74:23,0,21	0/1:10,0:10:30.58:46,0,31	0/0:25,0:25:46.31:0,46,330	0/0:16,0:16:22.42:0,22,230	0/0:24,0:21:44.48:0,44,273	0/0:15,0:14:38.09:0,38,239	0/0:31,0:29:45.53:0,46,419	0/0:18,0:16:45.47:0,45,311	0/0:5,0:5:5.26:0,5,36	0/0:10,0:10:6.03:0,6,41	0/0:13,0:13:5.01:0,5,51	0/0:11,0:11:7.89:0,8,39	0/0:27,1:25:35.85:0,36,380	0/0:26,0:23:55.44:0,55,352	0/0:18,0:17:37.23:0,37,277	0/1:6,1:7:1.94:2,0,94
chr10	96325435	.	A	AGC	143.21	PASS	AB=0.636;AC=1;AF=0.018;AN=56;BaseQRankSum=1.450;DP=458;FS=9.101;HRun=0;HaplotypeScore=185.8083;InbreedingCoeff=-0.0340;MQ=34.46;MQ0=13;MQRankSum=-1.571;QD=20.46;ReadPosRankSum=-1.723;VQSLOD=3.1762;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:24:57.61:0,58,614	0/0:9,0:9:26.95:0,27,300	0/0:17,0:2:3.01:0,3,49	0/0:24,0:3:2.85:0,3,49	0/0:32,0:29:61.04:0,61,675	0/0:12,0:12:34.08:0,34,240	0/0:9,0:9:22.57:0,23,233	0/0:23,0:21:61.25:0,61,814	0/0:13,0:13:34.43:0,34,275	0/0:9,0:9:21.04:0,21,263	0/0:9,0:8:19.29:0,19,244	0/0:14,0:14:34.65:0,35,295	0/0:9,0:8:20.45:0,20,119	0/0:8,0:8:22.91:0,23,180	0/0:23,0:23:53.77:0,54,669	0/0:19,0:18:36.26:0,36,370	0/0:24,0:21:56.62:0,57,653	0/0:13,0:12:33.09:0,33,421	0/0:34,0:30:85.08:0,85,909	0/0:19,0:17:50.16:0,50,530	0/0:4,0:4:8.99:0,9,94	0/0:9,0:9:26.24:0,26,225	0/0:13,0:13:38.12:0,38,337	0/0:9,0:9:20.54:0,21,182	0/0:25,0:22:66.16:0,66,800	0/0:26,0:23:63:0,63,681	0/0:17,0:16:47.91:0,48,521	0/1:3,4:7:99:217,0,132
chr10	96325437	.	AAC	A	2567.35	PASS	AB=0.983;AC=35;AF=0.625;AN=56;BaseQRankSum=-1.948;DP=466;FS=31.874;HRun=0;HaplotypeScore=171.1651;InbreedingCoeff=-0.4350;MQ=33.44;MQ0=13;MQRankSum=0.799;QD=6.03;ReadPosRankSum=-4.693;VQSLOD=0.8662;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,3:22:13.28:283,0,13	0/1:9,0:9:5.19:52,0,5	0/0:16,1:2:2.98:0,3,49	0/0:23,0:2:2.99:0,3,24	1/1:31,0:28:1.18:234,1,0	1/1:13,0:13:14.90:145,15,0	0/1:9,1:10:9.16:9,0,34	0/1:22,1:21:13.76:48,0,14	1/1:16,0:16:6.28:144,6,0	0/1:10,0:10:21.52:58,0,22	0/1:9,0:8:25:39,0,25	0/1:17,0:17:17.02:130,0,17	1/1:9,0:8:1.65:68,2,0	0/1:9,0:9:19.73:49,0,20	0/1:23,0:23:56.77:88,0,57	0/1:18,1:18:47.83:116,0,48	1/1:24,0:21:21.38:167,21,0	0/1:12,0:11:24.49:105,0,24	1/1:33,1:30:0.10:329,0,0	0/1:19,0:17:41.20:79,0,41	1/1:3,0:3:2.83:18,3,0	0/1:10,0:10:41.86:57,0,42	1/1:14,0:14:9.02:102,9,0	0/1:11,0:11:10.30:55,0,10	0/1:23,0:20:58.38:76,0,58	0/1:26,0:23:32.73:171,0,33	0/1:18,0:17:55.55:56,0,61	1/1:7,1:8:11.21:40,11,0
chr10	96325438	.	AC	A	3717.14	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=0.370;DP=462;FS=33.279;HRun=1;HaplotypeScore=161.9403;InbreedingCoeff=-0.0707;MQ=33.32;MQ0=13;MQRankSum=0.151;QD=8.81;ReadPosRankSum=1.761;VQSLOD=-0.6669;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:22:15.28:253,15,0	1/1:9,0:9:16.70:124,17,0	0/0:16,0:2:2.97:0,3,38	0/0:23,0:2:2.99:0,3,24	1/1:28,2:27:53.17:374,53,0	1/1:12,1:13:4.68:80,5,0	0/1:10,0:10:25.50:36,0,26	1/1:23,0:21:35.57:146,36,0	0/1:16,0:16:3.48:120,0,3	0/1:9,0:9:33.82:48,0,34	0/1:11,0:9:20.46:20,0,45	0/1:15,0:15:19.65:91,0,20	1/1:8,0:7:2.46:50,2,0	0/1:9,0:9:12.25:47,0,12	1/1:22,1:23:35.41:217,35,0	1/1:19,0:18:8.81:149,9,0	1/1:23,0:20:33.16:291,33,0	0/1:12,0:11:18.50:150,0,19	1/1:32,2:30:70.26:457,70,0	1/1:19,0:17:28.33:159,28,0	1/1:3,0:3:3.83:20,4,0	0/1:10,0:10:39.01:40,0,39	0/1:16,0:16:18.53:60,0,19	0/1:10,0:10:6.53:33,0,7	1/1:23,0:20:41.84:232,42,0	1/1:25,0:22:42.16:289,42,0	1/1:18,0:17:31.62:153,32,0	1/1:8,0:8:17.14:77,17,0
chr10	96325439	.	CA	C	609.71	PASS	AB=0.966;AC=18;AF=0.321;AN=56;BaseQRankSum=7.183;DP=506;FS=2.252;HRun=9;HaplotypeScore=196.9453;InbreedingCoeff=-0.0158;MQ=33.09;MQ0=14;MQRankSum=-2.695;QD=2.28;ReadPosRankSum=3.308;VQSLOD=-0.1908;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,7:23:3.82:138,0,4	0/1:8,0:8:1.65:2,0,62	0/0:17,0:2:5.98:0,6,54	0/0:27,0:1:0:0,0,0	0/1:30,0:27:12.24:12,0,60	0/1:17,0:17:3.84:54,0,4	0/1:11,0:11:4.07:85,0,4	0/0:24,0:22:45.33:0,45,300	1/1:18,1:19:18.12:110,18,0	0/1:13,0:13:7.50:7,0,32	0/1:13,0:11:6.08:6,0,25	0/1:21,0:21:11.48:11,0,53	1/1:9,0:8:9.78:49,10,0	0/1:12,0:12:13.35:51,0,13	0/0:24,0:24:26.74:0,27,158	0/1:14,6:19:19.58:98,0,20	0/1:23,1:21:15.89:16,0,45	0/0:14,0:13:10.27:0,10,62	0/0:36,0:32:21.03:0,21,184	0/0:19,0:17:31:0,31,203	0/0:3,0:3:3.83:0,4,20	0/1:13,0:13:6.24:46,0,6	0/1:19,0:19:22.11:69,0,22	0/1:12,0:12:9.59:13,0,10	0/0:23,0:20:19.94:0,20,186	0/0:25,0:22:15.62:0,16,133	0/0:17,1:17:16.17:0,16,186	0/0:8,0:8:9.43:0,9,53
chr10	96325443	.	A	AC	797.13	PASS	AB=0.974;AC=20;AF=0.357;AN=56;BaseQRankSum=-0.642;DP=504;FS=0.851;HRun=0;HaplotypeScore=176.8831;InbreedingCoeff=-0.2403;MQ=33.72;MQ0=15;MQRankSum=-0.191;QD=2.33;ReadPosRankSum=1.977;VQSLOD=3.1794;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:23:43.21:0,43,305	0/1:8,0:8:6.55:7,0,98	0/0:19,0:2:5.98:0,6,62	0/1:29,0:1:0:0,0,0	0/1:29,0:26:87.76:88,0,88	0/0:16,0:16:16.19:0,16,158	0/1:10,0:10:11.19:25,0,11	0/1:23,0:21:37.72:75,0,38	0/1:21,0:21:0.05:0,0,132	0/1:14,0:14:29.49:29,0,77	0/1:10,0:9:19.03:19,0,60	0/0:20,0:20:4.84:0,5,131	0/0:9,0:9:10.88:0,11,74	0/0:11,0:11:10.85:0,11,82	0/1:16,7:22:34.39:34,0,134	0/0:21,0:20:52.12:0,52,301	0/1:24,1:23:33.88:34,0,84	0/0:15,0:14:10.41:0,10,78	0/1:37,0:31:99:111,0,137	0/1:19,0:18:99:105,0,103	1/1:3,0:3:1.82:13,2,0	0/0:11,0:11:16.41:0,16,96	0/1:18,0:18:11.93:12,0,119	0/0:13,0:13:15.86:0,16,160	0/1:23,0:20:35.98:145,0,36	0/1:27,0:24:79.75:80,0,133	0/1:16,1:17:78.28:116,0,78	1/1:4,0:4:8.64:59,9,0
chr10	96325444	.	A	AC	1759.73	PASS	AB=0.835;AC=18;AF=0.321;AN=56;BaseQRankSum=-1.042;DP=501;FS=7.989;HRun=0;HaplotypeScore=172.3703;InbreedingCoeff=-0.0993;MQ=33.93;MQ0=15;MQRankSum=-1.482;QD=6.59;ReadPosRankSum=-2.201;VQSLOD=2.5113;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:24:73.21:147,0,73	0/0:8,0:8:17.36:0,17,174	0/0:19,0:2:5.98:0,6,62	0/1:30,0:1:0:0,0,0	0/0:29,0:26:47.36:0,47,272	0/1:15,2:17:29.77:30,0,124	0/1:5,5:10:1.05:154,0,1	0/0:21,0:20:4.59:0,5,381	0/1:18,4:22:99:127,0,108	0/1:8,4:12:51.83:131,0,52	0/1:7,3:9:50.94:100,0,51	0/1:16,3:19:61.01:61,0,120	0/1:7,1:8:11.29:11,0,64	0/1:8,3:11:49.60:50,0,61	0/0:23,0:22:37.16:0,37,256	0/1:18,0:19:72.78:85,0,73	1/1:15,10:23:19.21:534,19,0	1/1:7,6:13:11.05:315,11,0	0/0:38,0:32:63.31:0,63,439	0/0:20,0:18:47.38:0,47,309	0/0:3,0:3:3.84:0,4,21	0/1:8,2:10:20.88:21,0,70	0/1:12,6:18:99:143,0,101	0/1:11,3:14:13.40:13,0,124	0/0:23,0:20:54.73:0,55,314	0/0:27,0:24:45.19:0,45,342	0/0:18,0:17:41.76:0,42,284	0/0:4,0:4:4.21:0,4,64
chr10	96325449	.	CA	C	241.73	PASS	AB=0.772;AC=5;AF=0.089;AN=56;BaseQRankSum=4.242;DP=505;FS=0.600;HRun=9;HaplotypeScore=179.3160;InbreedingCoeff=0.2027;MQ=38.88;MQ0=14;MQRankSum=-4.421;QD=3.31;ReadPosRankSum=-1.345;VQSLOD=-0.2707;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,11:24:42.20:149,0,42	0/0:8,0:8:20.37:0,20,231	0/0:17,0:3:2.45:0,2,75	0/0:27,1:3:3.01:0,3,35	0/0:25,0:23:41.71:0,42,443	0/0:16,1:18:28.38:0,28,336	0/1:6,0:10:29.02:29,0,102	0/0:21,0:19:57.13:0,57,721	0/0:19,0:21:16.12:0,16,429	0/1:13,1:15:0.72:1,0,305	0/0:9,0:8:9.43:0,9,168	0/0:19,0:19:38.01:0,38,399	0/0:9,0:10:17.67:0,18,234	0/0:10,0:12:2.08:0,2,203	0/0:22,0:21:35.84:0,36,364	1/1:13,7:19:9.45:170,9,0	0/0:21,0:20:7.81:0,8,465	0/0:14,0:14:39.07:0,39,459	0/0:40,0:35:86.60:0,87,870	0/0:18,0:16:45.08:0,45,519	0/0:4,0:4:6:0,6,63	0/0:10,0:11:13.63:0,14,213	0/0:18,0:20:18.27:0,18,370	0/0:13,0:14:33.96:0,34,365	0/0:26,0:23:63.73:0,64,717	0/0:25,0:23:55.56:0,56,555	0/0:19,0:18:49.73:0,50,485	0/0:5,0:4:9.02:0,9,111
chr10	96325461	.	C	CA	655.08	PASS	AB=0.952;AC=12;AF=0.214;AN=56;BaseQRankSum=4.488;DP=528;FS=3.820;HRun=5;HaplotypeScore=180.5944;InbreedingCoeff=0.0414;MQ=51.23;MQ0=14;MQRankSum=-5.628;QD=3.18;ReadPosRankSum=0.596;VQSLOD=-0.5480;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,11:27:12.54:251,13,0	0/1:7,1:8:29.40:70,0,29	0/0:28,0:10:10.18:0,10,130	0/0:37,0:10:1.84:0,2,78	0/0:26,2:26:9.41:0,9,513	0/0:19,0:19:51.11:0,51,556	0/0:7,0:7:9.02:0,9,100	0/0:22,0:21:36.02:0,36,498	0/0:24,0:24:56.67:0,57,625	0/0:14,0:14:38.30:0,38,403	0/0:8,0:7:18.05:0,18,202	0/0:19,0:19:54.14:0,54,588	0/0:12,0:12:33.08:0,33,357	0/0:13,0:13:33.07:0,33,353	0/1:22,0:21:17.55:18,0,130	1/1:12,6:18:1.82:209,2,0	0/0:25,0:24:64.46:0,64,682	0/0:16,0:16:42.07:0,42,453	0/1:31,1:29:28.39:28,0,437	0/1:15,2:15:99:114,0,253	0/1:4,0:4:12.28:12,0,28	0/0:10,0:10:30.07:0,30,324	0/0:18,1:19:10.31:0,10,439	0/0:14,0:14:39.09:0,39,418	0/1:26,1:24:47.81:48,0,411	0/1:23,1:22:10.93:11,0,319	0/1:20,0:19:44.33:44,0,269	0/0:5,0:4:9.02:0,9,100
chr10	96325462	.	AAAAC	A	1208.27	PASS	AB=0.932;AC=4;AF=0.071;AN=56;BaseQRankSum=1.258;DP=525;FS=2.676;HRun=0;HaplotypeScore=199.0834;InbreedingCoeff=0.3409;MQ=51.56;MQ0=13;MQRankSum=-4.194;QD=23.24;ReadPosRankSum=0.648;VQSLOD=3.6542;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,10:25:13.78:787,14,0	0/0:7,0:7:1.42:0,1,104	0/0:28,0:10:5.53:0,6,237	0/0:38,0:10:13.62:0,14,164	0/0:28,0:26:31.27:0,31,756	0/0:19,0:19:46.48:0,46,551	0/0:7,0:7:9.03:0,9,169	0/0:22,0:21:41.30:0,41,729	0/0:23,0:23:14.16:0,14,741	0/0:14,0:14:35.91:0,36,608	0/0:10,0:9:24.82:0,25,345	0/0:20,0:20:38.23:0,38,684	0/0:12,0:12:24.33:0,24,390	0/0:13,0:13:32.16:0,32,480	0/0:22,0:21:30.06:0,30,421	0/1:16,3:18:45.62:517,0,46	0/0:26,0:24:42.78:0,43,818	0/0:16,0:16:35.73:0,36,473	0/0:31,0:28:45.47:0,45,717	0/0:17,0:15:36.20:0,36,530	0/1:4,0:4:13.56:14,0,38	0/0:10,0:10:26.58:0,27,348	0/0:19,0:19:42.99:0,43,603	0/0:15,0:15:31.20:0,31,426	0/0:27,0:24:36.87:0,37,610	0/0:25,0:22:30.94:0,31,472	0/0:19,0:19:23.87:0,24,714	0/0:5,0:4:11.71:0,12,197
chr10	96325466	.	C	CA	996.28	PASS	AB=0.912;AC=12;AF=0.214;AN=56;BaseQRankSum=3.705;DP=522;FS=14.098;HRun=4;HaplotypeScore=174.3319;InbreedingCoeff=0.1368;MQ=54.18;MQ0=13;MQRankSum=-5.177;QD=5.11;ReadPosRankSum=0.156;VQSLOD=-0.6148;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,11:24:23.57:298,24,0	0/1:4,1:5:6.57:41,0,7	0/0:27,0:11:18.64:0,19,205	0/0:39,1:13:5.86:0,6,77	0/0:25,1:25:33.35:0,33,288	0/0:19,0:19:32.58:0,33,145	0/0:7,0:7:6.74:0,7,36	0/0:22,0:21:51.14:0,51,405	0/0:22,0:22:4.14:0,4,134	0/0:13,0:13:31.50:0,32,237	0/0:11,0:10:23.97:0,24,135	0/0:21,0:21:32.71:0,33,168	0/0:12,0:12:18.32:0,18,101	0/0:15,0:15:21.84:0,22,149	0/1:20,1:20:51.23:51,0,91	1/1:13,7:19:10.86:327,11,0	0/0:25,0:23:60.48:0,60,471	0/0:17,0:17:34.86:0,35,308	0/1:24,4:25:99:124,0,155	0/1:18,2:18:55.83:56,0,135	0/1:4,0:4:8.11:8,0,9	0/0:10,0:10:18.01:0,18,72	0/0:18,0:18:7.12:0,7,123	0/0:15,0:15:24.17:0,24,137	0/1:23,3:23:99:128,0,156	0/1:22,2:21:34.88:35,0,127	0/1:17,2:19:85.20:85,0,151	0/0:6,0:5:11.40:0,11,75
chr10	96325470	.	C	CA	5811.95	PASS	AB=0.892;AC=36;AF=0.643;AN=56;BaseQRankSum=-5.337;DP=535;FS=7.101;HRun=9;HaplotypeScore=157.4403;InbreedingCoeff=0.0608;MQ=59.12;MQ0=11;MQRankSum=1.003;QD=13.03;ReadPosRankSum=0.684;VQSLOD=3.1249;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:17.22:0,17,120	0/1:5,0:5:9.36:26,0,9	0/0:31,0:14:15.73:0,16,127	0/1:45,0:16:3.34:3,0,116	0/0:27,0:26:42.33:0,42,291	1/1:0,20:20:54.15:597,54,0	1/1:1,4:5:9.02:100,9,0	1/1:7,15:22:19.01:417,19,0	1/1:1,20:21:63.17:694,63,0	1/1:2,9:14:35.58:332,36,0	1/1:2,10:11:4.02:273,4,0	1/1:3,18:21:53.64:618,54,0	0/1:2,13:15:12.08:326,0,12	0/1:2,13:15:6.08:356,0,6	0/1:21,0:20:50.32:50,0,90	0/1:19,0:19:23.23:23,0,69	1/1:10,0:24:48.93:273,49,0	1/1:5,0:18:22.73:114,23,0	0/1:30,0:27:99:107,0,174	0/1:19,0:18:12.08:12,0,135	0/0:4,0:4:2.01:0,2,13	1/1:0,11:11:33.09:362,33,0	1/1:2,14:16:31.56:477,32,0	1/1:2,12:15:35.93:379,36,0	0/1:26,0:23:82.86:83,0,160	0/1:24,0:21:43.95:44,0,130	0/1:20,0:20:58.92:59,0,171	0/1:3,4:6:14.02:88,0,14
chr10	96326790	.	A	ACCCTGGTGCATC	9829.91	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-9.445;DP=435;FS=13.402;HRun=0;HaplotypeScore=160.0626;InbreedingCoeff=0.9735;MQ=87.37;MQ0=0;MQRankSum=-11.123;QD=114.30;ReadPosRankSum=-1.670;VQSLOD=4.2616;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,10:26:42.10:2293,42,0	0/0:3,0:3:9.03:0,9,348	0/0:18,0:18:36.14:0,36,1404	0/0:18,0:18:51.16:0,51,1469	0/0:21,0:21:57.20:0,57,2195	0/0:23,0:23:66.23:0,66,2480	0/0:19,0:19:54.16:0,54,1880	1/1:7,1:10:30.10:1411,30,0	0/0:10,0:10:30.09:0,30,1062	0/0:14,0:14:39.13:0,39,1475	0/0:11,0:11:33.11:0,33,1202	0/0:22,0:22:60.21:0,60,2245	0/0:13,0:13:36.12:0,36,1319	0/0:14,0:14:42.14:0,42,1570	0/0:23,0:23:66.21:0,66,2326	1/1:5,10:15:45.15:2486,45,0	1/1:5,2:9:9.03:562,9,0	1/1:4,4:13:18.06:881,18,0	0/0:14,0:14:42.14:0,42,1362	0/0:11,0:11:33.11:0,33,1148	0/0:20,0:19:54.19:0,54,1962	0/0:16,0:16:48.16:0,48,1817	0/0:7,0:7:21.06:0,21,720	0/0:17,0:17:51.18:0,51,1868	0/0:20,0:20:57.20:0,57,2051	0/0:14,0:14:39.13:0,39,1506	0/0:21,0:21:63.20:0,63,2089	1/1:2,11:13:36.12:2197,36,0
chr10	96326863	.	CTTCTTTTTTTTTTT	C	980.30	PASS	AB=0.951;AC=13;AF=0.232;AN=56;BaseQRankSum=-0.854;DP=319;FS=11.217;HRun=0;HaplotypeScore=109.2326;InbreedingCoeff=0.3396;MQ=70.73;MQ0=20;MQRankSum=2.555;QD=11.27;ReadPosRankSum=4.133;VQSLOD=1.2843;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:36.25:0,36,827	1/1:1,0:1:2.98:21,3,0	0/0:29,0:11:26.19:0,26,303	0/0:41,0:11:4.84:0,5,77	0/1:13,0:13:3.76:57,0,4	0/0:17,0:16:36.05:0,36,1296	0/0:7,0:7:9.87:0,10,352	0/0:14,0:11:29.95:0,30,568	0/0:5,0:5:15.02:0,15,359	0/0:17,0:17:46.92:0,47,1475	0/0:11,0:11:30.05:0,30,855	0/0:13,0:12:29.94:0,30,432	0/1:6,0:5:2.80:3,0,260	0/0:9,0:9:23.91:0,24,411	1/1:13,0:12:22.40:193,22,0	0/0:7,0:7:11.96:0,12,369	0/0:11,0:11:17.96:0,18,404	0/0:10,0:7:12.01:0,12,313	0/1:8,0:8:20.72:113,0,21	0/1:5,1:5:1.68:157,0,2	1/1:6,0:6:9.84:71,10,0	0/0:10,0:10:26.95:0,27,407	0/0:5,0:5:14.95:0,15,164	0/0:5,0:5:12.75:0,13,81	0/1:10,0:10:5.81:86,0,6	0/1:9,3:12:27.73:202,0,28	0/1:12,0:12:53.80:235,0,54	0/0:6,0:6:8.97:0,9,221
chr10	96326865	.	TC	T	1523.19	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-1.954;DP=301;FS=11.187;HRun=1;HaplotypeScore=42.2629;InbreedingCoeff=0.6873;MQ=66.99;MQ0=20;MQRankSum=0.600;QD=14.93;ReadPosRankSum=0.895;VQSLOD=1.8443;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:17.81:0,18,129	1/1:1,0:1:3:27,3,0	0/0:27,0:9:19.55:0,20,133	0/0:40,0:10:3.80:0,4,61	1/1:2,7:9:23.79:170,24,0	0/0:17,0:16:31.89:0,32,254	0/0:5,0:5:9.79:0,10,88	0/0:14,0:11:29.87:0,30,250	0/0:5,0:5:10.71:0,11,100	0/0:17,0:17:9.57:0,10,204	0/1:12,0:12:6.75:7,0,96	0/0:11,0:10:20.61:0,21,184	0/1:6,0:5:18.42:18,0,36	0/0:9,0:9:16.98:0,17,152	1/1:13,0:12:35.99:317,36,0	0/0:5,0:5:11.64:0,12,72	0/0:10,0:10:17.81:0,18,124	0/1:10,0:7:7.85:8,0,39	1/1:7,0:7:20.98:180,21,0	1/1:6,0:5:14.96:125,15,0	1/1:5,0:5:11.92:89,12,0	0/0:9,0:9:18.27:0,18,157	0/0:5,0:5:11.26:0,11,90	0/0:5,0:5:9.44:0,9,71	1/1:9,0:9:24.49:218,24,0	1/1:12,0:12:29.98:263,30,0	1/1:12,0:12:35.94:304,36,0	0/0:5,0:5:8.67:0,9,52
chr10	96327941	.	A	AT	3418.78	PASS	AB=0.867;AC=20;AF=0.357;AN=56;BaseQRankSum=-6.184;DP=498;FS=6.323;HRun=11;HaplotypeScore=95.7159;InbreedingCoeff=0.5449;MQ=66.83;MQ0=0;MQRankSum=-0.138;QD=14.13;ReadPosRankSum=-0.170;VQSLOD=3.6207;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:56.28:0,56,427	0/1:5,5:10:3.26:107,0,3	0/0:3,0:4:1.28:0,1,24	0/0:19,0:19:14.47:0,14,101	0/1:9,11:20:12.99:186,0,13	0/0:20,0:20:50.71:0,51,387	0/0:21,0:21:53.77:0,54,413	0/0:26,0:27:58.74:0,59,441	0/0:16,0:16:38.77:0,39,295	0/1:14,0:14:15.89:16,0,75	0/1:13,0:13:1.87:2,0,71	0/0:14,0:14:25.92:0,26,192	0/0:13,0:13:32.78:0,33,247	0/0:13,0:13:26.88:0,27,206	1/1:2,17:19:24.87:433,25,0	0/0:17,0:16:26.82:0,27,207	0/1:15,1:16:0.60:1,0,174	0/0:14,0:15:40.88:0,41,308	1/1:1,19:20:36.84:540,37,0	1/1:4,19:23:41.45:517,41,0	1/1:4,12:16:0.81:190,1,0	0/0:18,0:18:33.87:0,34,309	0/1:16,1:18:0.52:1,0,221	0/0:21,0:21:44.82:0,45,347	1/1:13,18:32:43.81:594,44,0	1/1:6,19:25:1.81:498,2,0	1/1:2,14:16:33.07:334,33,0	0/0:15,1:16:11.29:0,11,258
chr10	96327951	.	T	TA	718.50	PASS	AB=0.937;AC=12;AF=0.214;AN=56;BaseQRankSum=7.891;DP=505;FS=1.312;HRun=0;HaplotypeScore=101.8446;InbreedingCoeff=-0.0026;MQ=66.63;MQ0=1;MQRankSum=-1.876;QD=3.49;ReadPosRankSum=4.419;VQSLOD=3.2892;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:64.96:0,65,822	0/1:8,1:9:27.18:28,0,27	0/0:6,0:6:6.96:0,7,95	0/0:19,0:18:31.54:0,32,253	0/1:15,3:18:73.47:73,0,106	0/0:23,0:23:35.94:0,36,763	0/0:20,0:20:60.15:0,60,780	0/0:26,0:26:75.04:0,75,925	0/0:18,0:18:51.07:0,51,623	0/1:10,2:12:43.49:43,0,238	0/1:13,1:14:12.91:13,0,209	0/0:14,0:13:32.20:0,32,371	0/0:14,0:14:42.08:0,42,510	0/0:14,0:14:36.03:0,36,431	0/1:20,0:20:51.35:59,0,51	0/0:18,0:17:50.92:0,51,535	0/0:15,0:15:36.09:0,36,450	0/0:14,0:14:42.03:0,42,553	0/1:21,0:21:34.96:35,0,36	0/1:22,2:24:35.54:124,0,36	0/0:19,0:19:2.40:0,2,131	0/0:17,1:18:20.73:0,21,558	0/1:15,1:16:9.97:10,0,428	0/0:22,0:22:54.03:0,54,678	1/1:22,9:31:19.75:332,20,0	0/1:24,1:25:73.17:98,0,73	0/1:16,0:16:0.46:57,0,0	0/0:17,0:17:44.47:0,44,603
chr10	96328051	.	TAC	T	63.86	PASS	AB=0.968;AC=20;AF=0.667;AN=30;BaseQRankSum=-1.268;DP=337;FS=0.000;HRun=0;HaplotypeScore=60.0011;InbreedingCoeff=0.2144;MQ=54.04;MQ0=20;MQRankSum=-0.592;QD=0.51;ReadPosRankSum=-0.085;VQSLOD=0.7362;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:7,0:7:2.37:8,2,0	./.	./.	./.	1/1:11,0:11:2.62:32,3,0	0/1:12,0:12:25.45:25,0,38	./.	./.	./.	1/1:9,2:10:0.47:1,0,0	1/1:6,0:6:0.89:2,1,0	1/1:6,3:9:3:32,3,0	0/1:7,0:7:0:0,0,0	1/1:11,0:11:5.12:22,5,0	0/1:8,1:9:0:0,0,0	./.	0/0:17,0:16:1.69:0,2,17	./.	./.	1/1:17,0:16:2.97:20,3,0	0/1:9,1:10:0:0,0,0	./.	0/0:14,4:17:0:0,0,0	./.	0/1:11,0:11:0.07:0,0,0	./.	0/1:3,0:3:0:0,0,0
chr10	96329029	.	G	GA	2835.94	PASS	AB=0.813;AC=36;AF=0.643;AN=56;BaseQRankSum=0.232;DP=577;FS=9.072;HRun=13;HaplotypeScore=61.9601;InbreedingCoeff=0.6964;MQ=55.65;MQ0=9;MQRankSum=-1.575;QD=7.73;ReadPosRankSum=0.924;VQSLOD=1.8831;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:21:25.80:138,26,0	0/1:10,2:13:29.86:30,0,103	1/1:16,0:7:2.74:12,3,0	0/0:10,0:5:5.91:0,6,40	0/0:32,0:34:40.81:0,41,393	1/1:5,17:22:36.48:328,36,0	1/1:4,14:18:15.02:139,15,0	1/1:16,0:27:22.68:132,23,0	1/1:6,15:22:6.18:202,6,0	1/1:8,17:27:0.97:396,1,0	1/1:5,12:17:6.98:186,7,0	1/1:7,21:28:9.45:230,9,0	1/1:8,9:15:9.01:84,9,0	1/1:4,16:19:17.97:159,18,0	0/0:21,0:23:26.97:0,27,252	1/1:15,0:16:15.86:92,16,0	1/1:6,0:22:19.89:100,20,0	1/1:6,0:17:17.04:86,17,0	0/0:21,0:19:22.79:0,23,224	0/0:27,0:27:34.23:0,34,329	0/0:18,0:21:17.39:0,17,219	1/1:5,10:14:6.45:202,6,0	1/1:4,7:11:6.33:189,6,0	0/1:13,6:19:3.99:244,0,4	0/0:24,0:23:30.78:0,31,307	0/0:28,0:28:12.31:0,12,202	0/0:18,2:20:7.64:0,8,197	1/1:4,0:16:17.04:86,17,0
chr10	96329362	.	A	AT	8237.40	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-15.196;DP=744;FS=1.684;HRun=5;HaplotypeScore=66.6101;InbreedingCoeff=0.9708;MQ=68.40;MQ0=0;MQRankSum=-1.455;QD=33.90;ReadPosRankSum=2.133;VQSLOD=5.2836;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,1160	1/1:1,12:13:33.11:434,33,0	0/0:18,0:15:40.18:0,40,404	0/0:17,0:16:18.99:0,19,356	1/1:0,39:39:99:1540,117,0	0/0:29,0:29:75.18:0,75,805	0/0:19,0:19:48.12:0,48,516	0/0:40,0:40:99:0,108,1153	0/0:25,0:25:69.17:0,69,742	0/0:41,0:41:99:0,114,1219	0/0:39,0:39:99:0,99,1064	0/0:24,0:24:69.17:0,69,740	0/0:14,0:14:39.10:0,39,419	0/0:22,0:22:63.16:0,63,677	1/1:3,27:30:69.22:908,69,0	0/0:26,0:26:78.18:0,78,830	0/0:28,0:28:78.19:0,78,838	0/0:25,0:25:66.13:0,66,697	1/1:4,19:23:57.16:730,57,0	1/1:2,38:40:99:1423,111,0	1/1:3,10:13:30.10:395,30,0	0/0:21,0:20:57.14:0,57,612	0/0:28,0:28:81.20:0,81,870	0/0:23,0:23:60.13:0,60,637	1/1:4,25:29:72.23:948,72,0	1/1:4,28:32:2.91:993,3,0	1/1:0,23:23:66.21:867,66,0	0/0:23,0:23:66.17:0,66,708
chr10	96330850	.	A	AG	9792.78	PASS	AB=0.761;AC=34;AF=0.630;AN=54;BaseQRankSum=-3.715;DP=396;FS=1.969;HRun=1;HaplotypeScore=45.2767;InbreedingCoeff=0.8292;MQ=51.86;MQ0=26;MQRankSum=-4.320;QD=38.71;ReadPosRankSum=2.203;VQSLOD=5.2324;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:75.26:1198,75,0	0/0:5,0:5:12.04:0,12,168	./.	0/0:20,0:5:5.28:0,5,82	0/0:17,0:16:45.15:0,45,629	1/1:1,14:15:39.13:622,39,0	1/1:3,19:20:54.18:862,54,0	1/1:2,12:14:29.76:478,30,0	1/1:0,11:11:33.11:527,33,0	1/1:0,14:14:39.13:622,39,0	1/1:1,5:6:15.05:240,15,0	1/1:0,13:13:30.10:479,30,0	1/1:0,17:17:45.15:716,45,0	1/1:0,13:13:36.12:575,36,0	0/0:17,0:17:48.15:0,48,654	1/1:0,13:13:36.12:570,36,0	1/1:0,21:20:54.18:862,54,0	1/1:0,18:18:54.18:863,54,0	0/0:21,0:18:48.11:0,48,621	0/0:11,0:11:33.11:0,33,449	0/0:7,0:7:21.07:0,21,293	0/1:3,7:10:23.85:216,0,24	1/1:0,10:10:21.07:335,21,0	1/1:0,7:7:21.07:335,21,0	0/0:14,0:14:39.13:0,39,544	0/1:13,1:14:5.84:6,0,503	0/0:13,0:13:33.08:0,33,441	1/1:1,6:6:18.06:288,18,0
chr10	96330896	.	GA	G	2397.24	PASS	AB=0.712;AC=31;AF=0.574;AN=54;BaseQRankSum=6.376;DP=351;FS=0.565;HRun=9;HaplotypeScore=75.8439;InbreedingCoeff=0.6461;MQ=37.99;MQ0=19;MQRankSum=-6.627;QD=11.58;ReadPosRankSum=-0.224;VQSLOD=2.9350;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,13:24:26.92:242,27,0	0/0:4,0:4:12.04:0,12,138	./.	0/0:14,0:1:2.50:0,2,9	0/0:18,0:18:33.10:0,33,380	1/1:0,15:15:36.01:328,36,0	0/1:6,6:10:13.61:144,0,14	1/1:6,10:14:30.01:273,30,0	1/1:5,4:9:8.63:104,9,0	1/1:10,7:16:23.99:215,24,0	1/1:1,4:5:9:82,9,0	1/1:5,7:12:11.99:110,12,0	1/1:5,9:14:20.99:192,21,0	1/1:5,8:13:23.84:207,24,0	0/0:17,0:17:35.78:0,36,368	1/1:3,4:7:11.99:110,12,0	1/1:8,9:15:20.97:192,21,0	1/1:11,4:14:8.81:82,9,0	0/0:21,0:19:51.05:0,51,541	0/0:10,0:10:9.61:0,10,79	0/0:3,0:3:3.01:0,3,35	0/1:4,1:5:18.41:18,0,60	0/1:3,4:7:19.57:94,0,20	1/1:3,3:5:3:27,3,0	0/0:16,0:15:26.97:0,27,293	0/0:18,1:19:11.67:0,12,374	0/0:16,0:16:32.83:0,33,329	1/1:7,6:10:20.87:176,21,0
chr10	96330905	.	AG	A	1578.41	PASS	AB=0.965;AC=29;AF=0.537;AN=54;BaseQRankSum=9.875;DP=425;FS=162.689;HRun=1;HaplotypeScore=74.4771;InbreedingCoeff=-0.1419;MQ=36.61;MQ0=26;MQRankSum=-1.996;QD=4.47;ReadPosRankSum=0.319;VQSLOD=-0.1175;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,5:35:99:195,0,100	0/0:5,0:4:10.85:0,11,127	./.	0/1:22,0:2:0.02:0,0,9	0/1:23,0:23:10.72:11,0,470	1/1:17,0:17:5.91:108,6,0	0/1:11,0:10:13.17:82,0,13	0/1:18,1:18:9.14:108,0,9	0/1:7,0:7:24.36:28,0,24	0/1:16,1:15:30.73:123,0,31	0/1:9,1:9:15.19:55,0,15	1/1:14,0:14:27.83:152,28,0	1/1:15,0:15:32.39:162,32,0	1/1:13,0:13:8.77:97,9,0	0/0:17,0:17:14.68:0,15,360	1/1:7,2:9:0.40:47,0,0	1/1:17,2:17:6.85:133,7,0	1/1:16,0:15:15.01:141,15,0	0/0:22,0:21:30.47:0,30,578	0/0:15,0:14:3.46:0,3,142	0/0:3,0:3:8.89:0,9,76	0/1:7,0:7:14.90:15,0,81	0/1:10,0:10:35.61:73,0,36	0/1:8,0:7:4.47:4,0,11	0/1:19,0:18:54.12:54,0,328	0/1:25,0:25:78.24:78,0,476	0/1:17,0:16:19.94:20,0,315	0/1:16,1:13:37.18:57,0,37
chr10	96332016	.	GGT	G	3496.37	PASS	AB=0.927;AC=24;AF=0.444;AN=54;BaseQRankSum=7.341;DP=645;FS=1.017;HRun=0;HaplotypeScore=102.7550;InbreedingCoeff=0.6292;MQ=66.53;MQ0=5;MQRankSum=3.680;QD=9.85;ReadPosRankSum=3.528;VQSLOD=3.5691;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:38:23.97:0,24,238	1/1:3,5:7:9.03:101,9,0	0/0:21,0:14:2.99:0,3,24	./.	1/1:16,5:22:11.87:114,12,0	0/0:18,0:18:0.66:0,1,135	0/1:17,1:19:8.98:9,0,288	0/0:24,0:27:32.88:0,33,305	0/0:14,0:15:12.04:0,12,173	1/1:16,0:26:22.90:120,23,0	1/1:8,0:14:8.52:42,9,0	0/1:26,0:26:27.87:28,0,418	0/0:15,0:15:21.04:0,21,291	0/1:18,0:18:12.33:12,0,233	1/1:15,20:36:50.98:550,51,0	0/0:10,0:18:5.97:0,6,52	0/0:26,1:37:17.95:0,18,477	0/0:9,0:13:12.02:0,12,141	0/1:19,9:27:0.78:247,0,1	1/1:14,9:22:26.82:288,27,0	1/1:32,31:63:69.20:772,69,0	0/0:9,0:9:9.03:0,9,137	0/0:17,0:17:18.05:0,18,250	0/0:26,0:26:48.57:0,49,643	1/1:6,10:17:26.86:281,27,0	1/1:13,16:29:23.27:463,23,0	1/1:11,15:26:42.12:469,42,0	0/0:9,0:12:14.99:0,15,128
chr10	96332158	.	G	GT	14538.14	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=2.923;DP=670;FS=6.058;HRun=1;HaplotypeScore=147.5919;InbreedingCoeff=0.9997;MQ=89.90;MQ0=0;MQRankSum=-13.106;QD=39.19;ReadPosRankSum=1.836;VQSLOD=4.0771;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,39:45:99:1469,102,0	0/0:10,0:10:30.09:0,30,358	0/0:43,0:43:99:0,116,1461	0/0:30,0:29:78.08:0,78,977	0/0:28,0:28:81.19:0,81,928	1/1:1,17:18:48.13:693,48,0	1/1:6,23:29:75.19:1075,75,0	1/1:0,16:16:48.12:675,48,0	1/1:2,18:20:57.19:851,57,0	1/1:0,29:29:84.28:1251,84,0	1/1:0,10:10:30.10:448,30,0	1/1:0,23:23:69.23:1032,69,0	1/1:0,16:16:48.16:717,48,0	1/1:2,14:16:42.14:627,42,0	0/0:24,0:24:72.17:0,72,820	1/1:1,24:25:69.23:1031,69,0	1/1:0,36:36:93.32:1392,93,0	1/1:0,14:14:39.13:584,39,0	0/0:28,0:28:84.16:0,84,941	0/0:17,0:17:38.30:0,38,474	0/0:28,0:28:81.22:0,81,957	1/1:3,19:22:51.10:735,51,0	1/1:0,20:20:60.16:873,60,0	1/1:3,13:16:27.02:374,27,0	0/0:21,0:21:63.19:0,63,749	0/0:30,0:30:87.23:0,87,1013	0/0:40,0:40:99:0,116,1383	1/1:1,15:16:48.16:710,48,0
chr10	96332182	.	TTTTTTG	T	9073.51	PASS	AB=0.935;AC=31;AF=0.554;AN=56;BaseQRankSum=10.654;DP=613;FS=1.680;HRun=0;HaplotypeScore=199.1522;InbreedingCoeff=0.8923;MQ=72.13;MQ0=0;MQRankSum=-15.035;QD=30.25;ReadPosRankSum=1.744;VQSLOD=4.2824;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,20:42:63.19:1191,63,0	0/0:9,0:9:12.04:0,12,349	0/0:38,0:37:33.11:0,33,766	0/0:24,0:21:37.68:0,38,970	0/0:26,0:26:69.23:0,69,2071	1/1:4,11:15:33.11:685,33,0	1/1:13,8:21:36.05:584,36,0	1/1:8,14:22:48.15:942,48,0	1/1:6,18:24:42.14:852,42,0	1/1:5,17:22:54.18:1085,54,0	1/1:4,1:5:3.01:62,3,0	1/1:8,11:19:33.11:684,33,0	1/1:8,4:12:21.07:340,21,0	1/1:5,11:16:33.07:616,33,0	0/0:21,0:21:51.18:0,51,1621	1/1:6,15:21:45.07:811,45,0	0/0:38,0:38:72.19:0,72,2140	0/0:19,0:19:45.14:0,45,1388	0/0:29,0:28:39.13:0,39,1091	0/0:17,0:17:39.13:0,39,1164	0/0:31,0:31:63.21:0,63,1915	1/1:6,5:11:15.01:219,15,0	1/1:8,9:17:18.05:337,18,0	1/1:9,6:15:18.02:295,18,0	0/0:24,0:24:57.19:0,57,1769	0/1:27,2:29:58.09:58,0,1758	0/0:37,0:37:93.30:0,93,2757	1/1:3,5:8:15.05:312,15,0
chr10	96332200	.	GTT	G	1783.18	PASS	AB=0.938;AC=15;AF=0.268;AN=56;BaseQRankSum=17.596;DP=608;FS=2.410;HRun=5;HaplotypeScore=155.8585;InbreedingCoeff=-0.3599;MQ=56.10;MQ0=1;MQRankSum=-14.117;QD=6.09;ReadPosRankSum=6.002;VQSLOD=-0.7213;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,3:44:99:272,0,567	0/0:6,0:6:15.05:0,15,263	0/0:20,0:18:48.14:0,48,723	0/0:32,0:28:71.05:0,71,1089	0/0:28,0:28:84.27:0,84,1451	0/1:15,0:15:29.12:153,0,29	0/1:20,2:22:99:157,0,331	0/1:32,2:34:99:156,0,438	0/1:25,1:26:99:150,0,348	0/1:23,2:25:99:241,0,142	0/1:7,0:7:7.83:8,0,203	0/1:21,0:21:99:110,0,313	0/1:9,4:13:99:175,0,162	0/1:12,1:13:48.10:100,0,48	0/0:21,0:21:60.21:0,60,1083	0/1:20,1:21:99:140,0,205	0/0:35,0:35:87.20:0,87,1436	0/0:21,0:21:57.14:0,57,968	0/0:24,0:23:57.19:0,57,985	0/0:15,0:15:45.15:0,45,804	0/0:26,0:26:75.25:0,75,1331	0/1:10,2:12:66.90:67,0,224	0/1:15,1:16:56.43:56,0,361	0/1:15,1:16:99:108,0,145	0/0:24,0:24:72.23:0,72,1240	0/0:27,0:27:61.95:0,62,1335	0/0:35,0:35:99:0,105,1839	0/1:7,0:7:18.62:48,0,19
chr10	96332422	.	A	AAC	849.16	PASS	AB=0.872;AC=28;AF=0.583;AN=48;BaseQRankSum=1.532;DP=644;FS=10.253;HRun=0;HaplotypeScore=136.9430;InbreedingCoeff=0.5279;MQ=66.17;MQ0=20;MQRankSum=-0.659;QD=2.49;ReadPosRankSum=-1.200;VQSLOD=1.9600;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,10:42:3.01:44,3,0	0/0:10,0:14:11.36:0,11,56	./.	./.	1/1:12,0:12:2.98:22,3,0	1/1:24,0:24:8.56:93,9,0	1/1:33,0:30:11.84:86,12,0	./.	1/1:30,0:29:12.86:100,13,0	1/1:20,0:20:8.98:75,9,0	0/1:10,0:8:0.03:0,0,1	1/1:26,0:25:6.79:34,7,0	1/1:17,0:17:8.97:71,9,0	1/1:13,0:12:8.99:74,9,0	0/0:17,0:19:2.84:0,3,14	0/1:20,10:32:22.09:212,0,22	0/0:16,0:18:5.68:0,6,28	0/0:18,0:30:10.95:0,11,55	1/1:16,0:16:0.47:1,0,0	0/0:17,0:19:5.81:0,6,46	0/0:40,0:38:2.98:0,3,32	1/1:18,0:17:6.01:66,6,0	1/1:19,0:19:6.01:61,6,0	1/1:28,0:28:5.88:68,6,0	0/0:9,0:10:2.84:0,3,14	0/0:13,0:18:6.11:0,6,28	0/0:19,0:19:8.14:0,8,93	./.
chr10	96332439	.	A	ACG	474.20	PASS	AB=0.965;AC=9;AF=0.161;AN=56;BaseQRankSum=8.652;DP=668;FS=14.951;HRun=0;HaplotypeScore=114.7574;InbreedingCoeff=-0.2006;MQ=48.91;MQ0=30;MQRankSum=1.186;QD=2.27;ReadPosRankSum=0.871;VQSLOD=1.5209;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:44:46.90:0,47,487	0/0:13,0:13:29.87:0,30,232	0/0:34,0:8:17.93:0,18,159	0/0:41,0:13:28.27:0,28,271	0/0:15,0:14:27.83:0,28,220	0/1:22,0:20:11.93:12,0,95	0/1:37,0:34:99:152,0,252	0/0:22,0:21:52.60:0,53,409	0/1:26,0:25:28.97:125,0,29	0/1:14,7:22:67.37:67,0,219	0/0:9,0:7:8.59:0,9,50	0/0:23,0:22:7.92:0,8,110	0/1:16,0:16:53.76:54,0,77	0/1:16,0:15:17.46:140,0,17	0/0:26,0:24:53.91:0,54,442	0/1:32,0:32:15.29:15,0,353	0/0:22,0:22:47.81:0,48,374	0/0:29,0:29:58.61:0,59,422	0/0:18,0:17:44.78:0,45,357	0/0:22,0:22:50.91:0,51,436	0/0:52,0:50:99:0,132,1086	0/1:18,0:17:35.11:35,0,43	0/1:19,1:19:10.73:11,0,102	0/0:23,4:28:2.72:0,3,104	0/0:16,0:15:26.96:0,27,221	0/0:19,0:18:53.95:0,54,464	0/0:18,0:18:41.64:0,42,382	0/0:5,0:4:11.97:0,12,96
chr10	96333341	.	G	GA	523.25	PASS	AB=0.821;AC=22;AF=0.393;AN=56;BaseQRankSum=-4.499;DP=356;FS=5.325;HRun=15;HaplotypeScore=73.1405;InbreedingCoeff=0.2672;MQ=55.48;MQ0=4;MQRankSum=0.037;QD=3.33;ReadPosRankSum=-2.969;VQSLOD=-0.1592;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:19:10.02:0,10,29	1/1:1,1:2:3:25,3,0	0/1:9,0:7:11.55:12,0,22	0/1:9,1:5:10.92:11,0,22	0/1:8,5:14:2.75:69,0,3	0/0:20,0:21:12.67:0,13,75	0/1:14,0:15:5.63:6,0,76	0/0:9,0:26:28.39:0,28,82	1/1:4,0:4:2.96:19,3,0	0/0:18,1:21:1.70:0,2,79	0/0:6,0:6:5.79:0,6,35	0/0:10,0:10:5.74:0,6,36	1/1:9,2:11:3.47:27,3,0	0/0:6,0:7:13.71:0,14,77	0/1:5,4:10:39.83:56,0,40	0/0:6,0:13:6.07:0,6,18	0/0:20,0:23:37.09:0,37,252	0/0:22,0:24:16.88:0,17,152	1/1:5,7:11:7.56:122,8,0	1/1:4,3:6:6.43:46,6,0	0/1:7,6:13:6.03:64,0,6	0/1:9,0:10:3.40:3,0,41	0/0:11,0:8:5.67:0,6,36	0/0:12,0:13:13.61:0,14,74	1/1:2,5:7:16.23:129,16,0	1/1:11,3:15:11.81:86,12,0	0/1:8,9:17:12.02:20,0,12	0/0:3,0:5:4.05:0,4,12
chr10	96334047	.	G	GTTT	1505.67	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=1.941;DP=474;FS=11.208;HRun=13;HaplotypeScore=85.8430;InbreedingCoeff=0.8291;MQ=58.84;MQ0=1;MQRankSum=0.189;QD=12.34;ReadPosRankSum=-0.449;VQSLOD=0.4519;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,12:24:27.07:408,27,0	0/0:13,0:13:23.78:0,24,258	0/0:15,0:11:3.43:0,3,43	0/1:8,0:4:0:0,0,0	0/0:21,0:21:26.53:0,27,290	0/0:19,0:20:35.84:0,36,371	0/0:13,0:14:21.87:0,22,255	1/1:11,4:15:19.31:293,19,0	0/0:15,0:17:31.37:0,31,329	0/0:23,0:23:20.50:0,21,214	0/0:17,0:18:29.73:0,30,304	0/1:14,0:14:30.35:30,0,111	0/0:15,0:16:31.44:0,31,352	0/0:9,0:9:20.99:0,21,218	0/0:15,0:16:28.15:0,28,305	1/1:1,7:11:24.02:336,24,0	1/1:6,1:18:29.89:256,30,0	1/1:3,0:23:23.91:182,24,0	0/0:21,0:22:26.84:0,27,262	0/0:14,0:15:20.64:0,21,226	0/0:18,0:20:18.94:0,19,208	0/0:18,0:19:25.38:0,25,249	0/0:15,0:17:26.69:0,27,261	0/0:13,0:13:20.79:0,21,211	0/0:10,0:11:14.67:0,15,147	0/0:25,0:26:25.59:0,26,289	0/0:24,0:25:30.38:0,30,380	1/1:5,3:9:12.91:185,13,0
chr10	96334126	.	CCT	C	1992.66	PASS	AB=1.000;AC=27;AF=0.540;AN=50;BaseQRankSum=2.180;DP=350;FS=1.369;HRun=0;HaplotypeScore=59.0315;InbreedingCoeff=0.7264;MQ=71.72;MQ0=18;MQRankSum=-1.705;QD=13.74;ReadPosRankSum=2.510;VQSLOD=3.4757;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:24.04:0,24,364	1/1:4,0:4:0.47:1,0,0	0/0:28,0:20:33.30:0,33,408	0/0:40,0:22:17.29:0,17,436	1/1:11,0:11:0.53:1,1,0	1/1:16,2:18:44.90:450,45,0	1/1:12,0:12:23.94:257,24,0	0/0:26,0:26:53.55:0,54,767	1/1:6,1:7:15.05:190,15,0	1/1:0,9:9:24.08:301,24,0	1/1:1,5:5:8.89:59,9,0	1/1:3,9:11:6.02:77,6,0	1/1:11,3:14:30.03:341,30,0	1/1:3,9:12:12.04:148,12,0	0/0:8,0:8:2.99:0,3,25	0/0:7,0:7:18.06:0,18,285	./.	0/1:11,0:9:0.01:0,0,0	0/0:10,0:9:2.02:0,2,24	./.	./.	1/1:2,8:10:14.85:116,15,0	1/1:4,6:8:15.03:159,15,0	1/1:7,2:7:6.01:64,6,0	0/0:9,0:9:0.94:0,1,2	0/0:12,0:12:2.46:0,2,5	0/0:13,0:13:4.16:0,4,45	0/0:6,0:6:11.52:0,12,122
chr10	96334260	.	CCA	C	187.68	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-1.497;DP=352;FS=11.271;HRun=0;HaplotypeScore=37.0903;InbreedingCoeff=0.4031;MQ=61.39;MQ0=64;MQRankSum=-0.026;QD=2.76;ReadPosRankSum=-0.091;VQSLOD=-0.0196;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:2,12:14:0:0,0,0	0/0:8,0:4:6:0,6,52	0/0:34,0:9:23.87:0,24,269	0/1:29,0:11:2.19:2,0,77	0/0:18,0:13:26.53:0,27,196	0/0:9,0:3:5.95:0,6,42	0/0:10,0:7:4.78:0,5,18	1/1:9,0:9:15.47:133,15,0	0/0:7,0:4:8.96:0,9,70	0/0:15,0:14:26.72:0,27,191	0/0:8,0:4:11.97:0,12,99	0/0:8,0:6:14.91:0,15,118	0/0:10,0:5:10.77:0,11,74	0/0:9,0:5:14.23:0,14,85	0/0:9,0:8:9.76:0,10,70	1/1:3,1:4:5.91:60,6,0	0/1:12,0:10:19.04:52,0,19	0/1:14,0:10:19.62:64,0,20	0/0:10,0:5:14.80:0,15,110	0/0:17,0:12:17.87:0,18,136	0/0:10,0:8:12.86:0,13,99	0/0:13,0:7:11.97:0,12,99	0/0:15,0:14:20.89:0,21,161	0/0:15,0:8:20.11:0,20,127	0/0:14,0:7:17.55:0,18,133	0/0:13,0:12:21.84:0,22,130	0/0:12,0:11:26.12:0,26,206	0/0:6,0:4:0:0,0,0
chr10	96335133	.	AG	A	8065	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=5.834;DP=466;FS=21.449;HRun=2;HaplotypeScore=146.5381;InbreedingCoeff=0.8577;MQ=63.21;MQ0=4;MQRankSum=-6.532;QD=18.93;ReadPosRankSum=5.219;VQSLOD=3.4264;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,8:23:47.53:398,48,0	1/1:2,7:9:25.77:206,26,0	0/0:19,0:14:31.51:0,32,372	0/0:20,0:16:26.67:0,27,424	1/1:11,9:20:47.50:337,48,0	1/1:6,14:20:44.43:358,44,0	1/1:6,12:18:44.83:361,45,0	1/1:12,13:25:67.18:688,67,0	1/1:7,11:18:40.70:322,41,0	1/1:9,17:26:71.86:607,72,0	1/1:7,12:19:44.67:337,45,0	1/1:5,9:14:41.72:336,42,0	1/1:5,3:8:11.95:93,12,0	1/1:8,14:22:50.87:423,51,0	1/1:5,6:11:23.95:198,24,0	1/1:10,9:19:46.52:368,47,0	1/1:8,7:15:15.43:190,15,0	1/1:12,8:18:5.44:241,5,0	1/1:14,8:22:65.12:492,65,0	1/1:7,8:13:35.77:277,36,0	1/1:5,4:9:12.86:101,13,0	1/1:9,8:17:41.76:320,42,0	1/1:3,8:11:29.88:237,30,0	1/1:7,3:10:8.95:68,9,0	1/1:0,3:3:9:78,9,0	1/1:7,15:22:64.69:523,65,0	1/1:8,11:19:43.69:349,44,0	1/1:8,1:9:23.06:156,23,0
chr10	96335134	.	GGTT	G	11394.51	PASS	AB=0.990;AC=46;AF=0.821;AN=56;BaseQRankSum=-0.521;DP=477;FS=5.573;HRun=0;HaplotypeScore=150.3619;InbreedingCoeff=0.2779;MQ=62.49;MQ0=5;MQRankSum=-5.738;QD=26.13;ReadPosRankSum=4.384;VQSLOD=4.2767;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:29:16.06:16,0,165	1/1:7,2:9:27.09:380,27,0	0/0:19,0:14:32.24:0,32,497	0/0:22,0:16:8.46:0,8,649	1/1:9,11:20:47.92:611,48,0	1/1:14,6:19:45.12:628,45,0	1/1:12,6:18:45.09:633,45,0	0/1:26,0:26:40.38:40,0,130	1/1:11,7:18:42.14:592,42,0	1/1:17,9:26:72.19:1023,72,0	1/1:12,7:19:45.13:640,45,0	1/1:14,0:14:41.91:542,42,0	1/1:3,5:8:11.91:191,12,0	1/1:16,7:23:15.11:702,15,0	1/1:7,4:11:24.08:358,24,0	0/1:12,0:22:60.25:121,0,60	0/1:15,0:16:19.32:217,0,19	0/1:19,0:17:40.57:270,0,41	1/1:8,14:22:66.13:964,66,0	1/1:10,4:12:35.93:435,36,0	1/1:4,5:9:15.30:188,15,0	1/1:8,8:16:42.10:611,42,0	1/1:8,3:11:30.10:429,30,0	1/1:3,7:10:9.01:132,9,0	1/1:3,0:3:9.03:125,9,0	1/1:15,7:22:66.16:890,66,0	1/1:11,8:19:45.15:652,45,0	0/1:10,0:9:4.24:4,0,79
chr10	96335138	.	T	TG	340.43	PASS	AB=0.607;AC=2;AF=0.036;AN=56;BaseQRankSum=2.515;DP=490;FS=0.684;HRun=0;HaplotypeScore=180.2807;InbreedingCoeff=-0.0457;MQ=58.14;MQ0=8;MQRankSum=-4.096;QD=6.68;ReadPosRankSum=1.378;VQSLOD=3.6200;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,20:29:88.40:265,0,88	0/0:9,0:9:24.68:0,25,146	0/0:20,0:12:21.75:0,22,300	0/0:25,0:17:25.28:0,25,391	0/0:20,0:20:30.84:0,31,187	0/0:20,0:19:44.16:0,44,288	0/0:21,0:20:40.39:0,40,251	0/0:30,0:30:81.86:0,82,648	0/0:18,0:18:41.14:0,41,265	0/0:27,0:26:61.60:0,62,374	0/0:19,0:19:36.09:0,36,223	0/0:14,0:14:35.14:0,35,267	0/0:7,0:7:11.86:0,12,81	0/0:22,0:22:50.48:0,50,313	0/0:13,0:13:22.92:0,23,150	0/1:7,13:20:99:164,0,117	0/0:18,0:18:23.17:0,23,307	0/0:19,0:17:41.73:0,42,371	0/0:23,0:23:59.28:0,59,437	0/0:15,0:12:27.81:0,28,173	0/0:8,0:8:14.60:0,15,96	0/0:16,0:16:35.58:0,36,222	0/0:11,0:10:27.51:0,28,177	0/0:11,0:11:5.92:0,6,39	0/0:3,0:3:8.83:0,9,53	0/0:22,0:22:56.98:0,57,363	0/0:19,0:19:40.51:0,41,241	0/0:9,0:8:20.37:0,20,129
chr10	96335140	.	TTTTTTG	T	10343.64	PASS	AB=0.600;AC=39;AF=0.696;AN=56;BaseQRankSum=2.870;DP=483;FS=3.828;HRun=0;HaplotypeScore=180.1181;InbreedingCoeff=0.8909;MQ=55.55;MQ0=9;MQRankSum=-3.605;QD=33.47;ReadPosRankSum=4.980;VQSLOD=4.2793;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:76.39:0,76,1531	1/1:2,7:9:23.18:377,23,0	0/0:21,0:11:23.11:0,23,354	0/0:22,0:16:30.06:0,30,651	1/1:11,8:20:38.30:452,38,0	1/1:5,14:19:47.86:713,48,0	1/1:9,12:21:20.59:704,21,0	0/0:32,0:32:68.11:0,68,1408	1/1:9,11:20:46.99:748,47,0	1/1:8,17:24:65.47:940,65,0	1/1:6,12:18:47.34:627,47,0	1/1:4,9:13:32.02:447,32,0	1/1:3,3:6:14.79:154,15,0	0/1:7,14:21:47.02:718,0,47	1/1:8,6:14:32.92:478,33,0	0/0:20,0:20:13.29:0,13,771	0/0:19,0:19:24.68:0,25,299	0/0:17,0:15:19.01:0,19,284	1/1:14,8:22:57.87:620,58,0	1/1:6,8:11:26.95:427,27,0	1/1:4,4:8:14.94:208,15,0	1/1:7,8:15:38.62:504,39,0	1/1:3,8:10:29.85:437,30,0	1/1:6,3:9:14.87:186,15,0	1/1:0,3:3:9.03:157,9,0	1/1:7,15:22:56.45:835,56,0	1/1:7,11:18:41.01:613,41,0	0/0:9,0:8:21.02:0,21,491
chr10	96335142	.	T	TTTG	2431.15	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=-10.509;DP=495;FS=3.534;HRun=0;HaplotypeScore=191.8911;InbreedingCoeff=0.6544;MQ=52.07;MQ0=9;MQRankSum=2.256;QD=19.77;ReadPosRankSum=-5.068;VQSLOD=2.6363;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:30:80.63:847,81,0	0/0:9,0:9:19.57:0,20,161	0/0:20,0:10:0.21:0,0,204	0/0:25,0:16:3.42:0,3,281	0/0:18,0:18:8.68:0,9,148	0/0:20,0:19:32.87:0,33,296	0/0:24,0:23:32.57:0,33,301	1/1:19,13:31:78.08:814,78,0	0/0:20,0:20:35.70:0,36,288	0/0:29,0:28:38.72:0,39,386	0/0:20,0:20:25.92:0,26,263	0/0:11,0:11:16.96:0,17,166	0/1:7,0:7:2.92:3,0,34	0/0:21,0:21:35.50:0,35,313	0/0:16,0:16:20.79:0,21,196	1/1:20,0:20:51.65:526,52,0	0/0:19,0:19:47.98:0,48,435	0/0:17,0:15:45.02:0,45,423	0/1:23,0:22:7.98:8,0,167	0/0:15,0:12:19.95:0,20,170	0/0:10,0:10:10.33:0,10,96	0/0:14,0:14:4.60:0,5,147	0/0:12,0:11:15.75:0,16,164	0/0:10,0:10:11.11:0,11,95	0/0:3,0:3:8.95:0,9,66	0/0:21,0:21:29.95:0,30,310	0/0:17,0:17:23.40:0,23,237	1/1:2,6:8:20.96:393,21,0
chr10	96335143	.	TTTG	T	6896.97	PASS	AB=0.885;AC=43;AF=0.768;AN=56;BaseQRankSum=3.660;DP=499;FS=1.904;HRun=0;HaplotypeScore=169.2482;InbreedingCoeff=0.5417;MQ=51.88;MQ0=9;MQRankSum=-2.860;QD=16.99;ReadPosRankSum=3.567;VQSLOD=4.7220;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:82.58:0,83,801	1/1:9,0:9:23.96:221,24,0	0/1:22,0:10:13.83:14,0,171	0/1:25,0:16:5.85:6,0,295	1/1:19,0:19:38.52:302,39,0	1/1:20,0:19:51.55:440,52,0	1/1:23,0:22:45.20:459,45,0	0/0:31,0:30:69.68:0,70,769	1/1:21,0:21:45.61:407,46,0	1/1:30,0:29:71.88:643,72,0	1/1:19,0:19:50.71:420,51,0	1/1:11,0:11:26.60:247,27,0	1/1:7,0:7:15.58:107,16,0	0/1:21,0:21:11.35:382,0,11	1/1:16,0:16:36.59:311,37,0	0/0:21,0:21:54.12:0,54,526	0/1:12,7:19:4.19:277,0,4	0/1:10,8:16:30.44:255,0,30	1/1:23,0:22:39.15:312,39,0	1/1:15,0:12:29.92:268,30,0	1/1:10,0:10:19.76:158,20,0	1/1:14,0:14:36.23:293,36,0	1/1:12,0:11:31.49:269,31,0	1/1:10,0:10:17.90:141,18,0	1/1:3,0:3:9.01:88,9,0	1/1:19,0:19:54.70:492,55,0	1/1:19,0:19:43.71:384,44,0	0/0:9,0:8:20.55:0,21,247
chr10	96335720	.	GA	G	7109.26	PASS	AB=0.945;AC=45;AF=0.804;AN=56;BaseQRankSum=3.408;DP=524;FS=7.169;HRun=8;HaplotypeScore=101.9702;InbreedingCoeff=0.8703;MQ=58.07;MQ0=9;MQRankSum=-2.657;QD=16.69;ReadPosRankSum=3.613;VQSLOD=4.4180;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:82:0,82,931	1/1:1,4:5:9.01:87,9,0	0/0:25,3:9:9.03:0,9,104	0/1:48,2:14:6.15:6,0,144	1/1:6,18:24:33.03:318,33,0	1/1:4,12:16:33.05:318,33,0	1/1:2,13:15:24.03:231,24,0	0/0:8,0:8:17.07:0,17,176	1/1:7,10:17:33.04:313,33,0	1/1:6,18:24:57:526,57,0	1/1:2,8:10:24.02:227,24,0	1/1:5,10:14:30.01:280,30,0	1/1:3,5:8:18.02:168,18,0	1/1:3,13:16:30.04:289,30,0	1/1:5,15:20:36.05:348,36,0	0/0:16,0:19:38.20:0,38,402	1/1:12,27:39:85.43:797,85,0	1/1:4,12:16:39.05:375,39,0	1/1:7,13:20:39.06:376,39,0	1/1:4,15:19:39.04:371,39,0	1/1:2,6:8:18.03:173,18,0	1/1:6,12:18:30.04:289,30,0	1/1:3,11:14:26.83:259,27,0	1/1:5,12:17:23.89:224,24,0	1/1:1,13:14:24.02:231,24,0	1/1:2,20:22:57.08:544,57,0	1/1:8,9:17:39.01:358,39,0	0/0:4,0:4:12.04:0,12,145
chr10	96335728	.	AG	A	2665.16	PASS	AB=0.977;AC=39;AF=0.696;AN=56;BaseQRankSum=3.537;DP=614;FS=120.664;HRun=1;HaplotypeScore=149.4173;InbreedingCoeff=-0.1956;MQ=47.87;MQ0=19;MQRankSum=1.543;QD=4.65;ReadPosRankSum=4.560;VQSLOD=0.3910;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:23.86:0,24,923	1/1:5,0:5:9.01:51,9,0	0/1:44,1:7:0.20:0,0,109	0/1:52,2:10:9.30:9,0,145	0/1:30,1:31:97.36:108,0,97	1/1:14,0:14:21.69:110,22,0	0/1:17,0:17:32.64:42,0,33	0/1:16,0:16:93.79:94,0,221	1/1:19,3:22:20.82:250,21,0	0/1:23,2:25:23.96:131,0,24	0/1:15,0:15:23.85:49,0,24	1/1:18,0:18:27.74:209,28,0	1/1:6,0:6:12.56:59,13,0	1/1:21,0:21:1.91:86,2,0	1/1:19,1:20:3.21:100,3,0	0/1:19,1:20:22.73:23,0,360	1/1:41,2:44:23.53:398,24,0	1/1:17,1:18:26.65:188,27,0	0/1:25,0:24:55.31:79,0,55	0/1:18,0:18:33.53:54,0,34	0/1:12,0:12:13.55:59,0,14	0/1:17,1:18:13.91:99,0,14	1/1:13,0:13:20.66:100,21,0	1/1:18,2:19:8.06:109,8,0	0/1:15,0:15:48.95:86,0,49	0/1:28,1:29:66.32:96,0,66	1/1:20,2:23:14.13:240,14,0	0/1:7,0:7:1.85:2,0,150
chr10	96335732	.	TA	T	5896.79	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=3.659;DP=602;FS=29.335;HRun=11;HaplotypeScore=137.0925;InbreedingCoeff=0.7368;MQ=49.14;MQ0=21;MQRankSum=-5.067;QD=12.60;ReadPosRankSum=2.449;VQSLOD=2.6512;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:83.06:0,83,715	1/1:3,1:4:2.99:24,3,0	0/0:47,0:7:10.71:0,11,71	0/1:52,0:10:10.94:11,0,19	1/1:15,16:31:65.63:475,66,0	1/1:7,6:13:25.72:214,26,0	1/1:3,9:13:31.87:241,32,0	0/0:21,0:20:4.85:0,5,35	1/1:14,8:22:37.74:264,38,0	1/1:14,9:23:46.60:388,47,0	1/1:8,9:17:21.86:223,22,0	1/1:10,7:18:40.89:262,41,0	1/1:2,5:7:10.95:111,11,0	1/1:9,10:19:7.82:222,8,0	1/1:14,5:19:34.81:246,35,0	0/0:20,0:20:20.59:0,21,266	1/1:28,13:40:83.36:601,83,0	1/1:7,9:17:43.62:319,44,0	1/1:13,13:25:40.59:320,41,0	1/1:13,6:19:35.44:276,35,0	1/1:6,6:12:27.36:200,27,0	1/1:10,9:19:45.66:325,46,0	1/1:3,7:10:20.93:165,21,0	1/1:11,8:18:9.97:99,10,0	1/1:6,9:15:38.89:311,39,0	1/1:15,13:28:27.03:359,27,0	1/1:16,7:23:29.31:239,29,0	0/0:7,0:7:1.10:0,1,5
chr10	96335740	.	AAAAG	A	6571.48	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=6.814;DP=610;FS=8.158;HRun=0;HaplotypeScore=161.7974;InbreedingCoeff=0.7988;MQ=48.50;MQ0=23;MQRankSum=-4.106;QD=13.12;ReadPosRankSum=-0.940;VQSLOD=3.9571;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:32.42:0,32,969	1/1:2,0:2:5.37:34,5,0	0/0:50,0:6:11.09:0,11,124	0/1:50,0:10:0.35:0,0,26	1/1:27,1:28:60.13:436,60,0	1/1:14,0:14:21.91:245,22,0	1/1:13,0:13:31.66:266,32,0	1/1:26,0:25:46.38:400,46,0	1/1:19,0:19:43.04:417,43,0	1/1:29,0:28:29.52:313,30,0	1/1:16,0:16:29.33:177,29,0	1/1:22,0:21:56.52:431,57,0	1/1:6,0:6:14.57:78,15,0	1/1:17,0:17:19.91:217,20,0	1/1:14,1:15:29.72:219,30,0	0/0:18,0:18:5.94:0,6,438	1/1:40,1:40:82.37:705,82,0	1/1:16,1:17:27.63:254,28,0	1/1:27,0:26:18.18:371,18,0	1/1:14,0:14:25.21:144,25,0	1/1:13,0:13:10.92:150,11,0	1/1:21,0:21:25.31:316,25,0	1/1:11,0:11:16.80:104,17,0	1/1:22,0:20:9.54:149,10,0	1/1:15,0:15:15.38:133,15,0	1/1:30,0:30:48.28:354,48,0	1/1:24,0:24:60.68:530,61,0	1/1:9,0:8:16.39:127,16,0
chr10	96335744	.	GAAA	G	2933.37	PASS	AB=0.849;AC=42;AF=0.750;AN=56;BaseQRankSum=7.391;DP=611;FS=0.541;HRun=17;HaplotypeScore=166.5052;InbreedingCoeff=0.5328;MQ=49.40;MQ0=23;MQRankSum=-3.529;QD=6.29;ReadPosRankSum=2.300;VQSLOD=-0.6735;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:40:83.57:0,84,930	1/1:2,0:2:2.92:20,3,0	0/0:51,0:6:11.81:0,12,128	0/1:48,0:11:8.81:25,0,9	1/1:18,7:26:21.74:165,22,0	1/1:8,3:13:17.45:114,17,0	1/1:5,1:12:20.94:137,21,0	0/0:28,0:27:15.03:0,15,103	1/1:13,0:19:29.13:145,29,0	1/1:24,2:28:15.49:135,15,0	1/1:14,0:17:1.57:27,2,0	1/1:17,1:21:36.56:193,37,0	0/1:5,0:7:0.86:19,0,1	1/1:13,1:17:16.54:88,17,0	1/1:15,1:17:23.21:139,23,0	0/0:17,0:17:34.69:0,35,412	1/1:33,7:40:47.28:428,47,0	1/1:14,3:18:18.74:154,19,0	1/1:12,14:25:24.81:331,25,0	1/1:11,1:14:4.05:52,4,0	0/1:11,2:14:12.94:46,0,13	1/1:14,1:21:24.84:131,25,0	1/1:9,0:11:5.43:22,5,0	1/1:16,1:20:3.46:41,3,0	0/1:12,2:15:0.86:40,0,1	1/1:23,7:30:23.60:246,24,0	1/1:13,8:23:53.19:407,53,0	0/0:9,0:8:4.19:0,4,21
chr10	96337672	.	A	AT	2549.73	PASS	AB=0.926;AC=45;AF=0.865;AN=52;BaseQRankSum=1.710;DP=242;FS=20.813;HRun=3;HaplotypeScore=49.7693;InbreedingCoeff=0.3218;MQ=76.81;MQ0=27;MQRankSum=-1.727;QD=11.54;ReadPosRankSum=-0.363;VQSLOD=0.4113;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:11:21.03:0,21,235	1/1:1,2:3:6.01:65,6,0	0/1:40,0:12:54.76:55,0,86	0/1:38,0:12:8.62:9,0,92	1/1:3,1:4:3.47:29,3,0	1/1:3,10:13:30.01:322,30,0	1/1:0,3:1:3:27,3,0	1/1:11,1:10:15.22:148,15,0	1/1:2,5:7:20.70:180,21,0	1/1:1,3:4:3.92:86,4,0	1/1:2,0:2:0.47:1,0,0	1/1:1,6:7:15.02:146,15,0	1/1:1,0:1:3:25,3,0	1/1:1,1:2:6:53,6,0	1/1:2,4:6:11.52:107,12,0	0/0:7,0:7:15.04:0,15,170	1/1:3,0:11:14.45:89,14,0	1/1:2,0:7:14.81:100,15,0	1/1:5,9:10:19.03:246,19,0	1/1:1,3:4:9.02:90,9,0	./.	1/1:0,1:1:3:29,3,0	1/1:1,2:3:6.90:60,7,0	./.	0/1:5,2:7:10.17:72,0,10	1/1:2,6:8:21.03:208,21,0	1/1:5,5:9:24.01:229,24,0	1/1:5,7:12:30.05:314,30,0
chr10	96337682	.	A	AAG	3942.58	PASS	AB=0.777;AC=44;AF=0.786;AN=56;BaseQRankSum=-0.777;DP=243;FS=61.778;HRun=0;HaplotypeScore=46.3157;InbreedingCoeff=0.4436;MQ=78.12;MQ0=24;MQRankSum=-3.886;QD=24.80;ReadPosRankSum=2.203;VQSLOD=1.4520;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:10:18.06:0,18,249	1/1:1,3:4:11.99:158,12,0	0/0:30,0:11:18.05:0,18,226	0/0:33,0:13:8.73:0,9,148	1/1:3,4:7:11.87:126,12,0	1/1:2,11:13:33.06:458,33,0	1/1:0,3:1:3.01:38,3,0	0/1:7,3:7:0.92:192,0,1	1/1:1,5:7:18.52:227,19,0	0/1:2,3:5:9.41:114,0,9	1/1:1,1:2:3.01:52,3,0	1/1:2,6:8:12.03:165,12,0	1/1:1,0:1:2.94:18,3,0	1/1:1,1:2:3.01:40,3,0	1/1:2,5:7:3.84:187,4,0	0/0:6,0:6:12.04:0,12,173	1/1:2,0:11:11.78:93,12,0	1/1:1,0:6:9.01:88,9,0	1/1:4,13:14:14.31:423,14,0	1/1:2,4:6:10.98:185,11,0	0/1:1,0:1:0:0,0,0	1/1:1,1:2:3.01:40,3,0	1/1:1,3:4:9.03:133,9,0	1/1:2,1:2:3.01:50,3,0	0/1:3,2:5:55.06:71,0,55	1/1:2,7:9:27.04:347,27,0	1/1:5,7:11:27.04:369,27,0	1/1:4,8:12:24.06:368,24,0
chr10	96337730	.	CT	C	1197.28	PASS	AB=0.656;AC=42;AF=0.750;AN=56;BaseQRankSum=-0.945;DP=318;FS=0.000;HRun=16;HaplotypeScore=48.6403;InbreedingCoeff=0.3979;MQ=50.29;MQ0=41;MQRankSum=-1.886;QD=4.99;ReadPosRankSum=2.308;VQSLOD=1.3812;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,1:16:20.87:0,21,164	1/1:0,3:4:10.86:59,11,0	0/0:19,0:5:10.42:0,10,53	0/0:22,0:9:11.96:0,12,56	1/1:3,10:11:17.64:107,18,0	0/1:7,6:12:35.52:38,0,36	0/1:3,7:9:3.66:76,0,4	0/1:17,6:13:12.18:40,0,12	1/1:4,3:8:7.89:42,8,0	1/1:2,5:7:11.52:71,12,0	0/0:2,5:8:0:0,0,0	1/1:2,6:10:9.96:48,10,0	1/1:3,1:2:1.82:5,2,0	1/1:0,3:3:2.94:18,3,0	1/1:3,4:7:7.91:42,8,0	0/0:7,0:7:5.96:0,6,44	1/1:7,15:19:21.73:119,22,0	1/1:3,6:8:8.81:54,9,0	1/1:19,1:17:13.15:68,13,0	1/1:5,7:12:24.78:154,25,0	1/1:6,1:6:0.40:1,0,0	1/1:0,8:8:8.83:54,9,0	1/1:2,3:6:4.91:24,5,0	0/1:3,8:10:29.67:69,0,30	1/1:1,6:5:8.50:53,8,0	1/1:5,3:8:8.67:53,9,0	1/1:2,11:14:21.64:119,22,0	1/1:2,3:4:7.90:41,8,0
chr10	96337745	.	TTC	T	45.62	PASS	AB=0.977;AC=13;AF=0.232;AN=56;BaseQRankSum=4.370;DP=325;FS=21.506;HRun=0;HaplotypeScore=51.6192;InbreedingCoeff=-0.1707;MQ=48.93;MQ0=39;MQRankSum=-3.768;QD=0.36;ReadPosRankSum=-0.094;VQSLOD=-0.1286;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:20:36.42:0,36,394	0/1:4,0:4:11.59:12,0,17	0/0:15,0:4:8.89:0,9,106	0/0:12,0:6:11.73:0,12,81	0/0:15,0:13:2.70:0,3,65	0/1:13,1:12:10.06:10,0,142	0/1:11,1:9:31.63:32,0,57	0/1:18,0:10:19.62:20,0,95	0/1:8,0:8:4.80:5,0,33	0/0:8,0:7:17:0,17,114	0/0:7,1:8:2.94:0,3,18	0/1:11,0:11:6.50:7,0,9	0/1:5,0:3:8.72:9,0,11	0/0:5,0:4:2.04:0,2,6	0/0:7,1:6:4.69:0,5,46	0/0:5,0:5:8.75:0,9,85	0/0:27,0:21:10.98:0,11,159	0/0:10,0:8:11.75:0,12,70	0/1:14,2:14:65.43:65,0,106	0/1:15,0:13:5.73:6,0,42	1/1:8,0:7:0.02:0,0,0	0/0:11,0:10:5.50:0,6,60	0/1:7,0:7:5.73:6,0,16	0/0:13,0:12:20.61:0,21,243	0/0:9,1:7:11.74:0,12,72	0/1:9,0:7:0.13:0,0,54	0/0:18,0:16:10.87:0,11,82	0/0:7,0:5:9.15:0,9,55
chr10	96337853	.	CG	C	1765.44	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.440;DP=491;FS=4.683;HRun=1;HaplotypeScore=52.3348;InbreedingCoeff=0.9739;MQ=86.11;MQ0=0;MQRankSum=-1.882;QD=37.56;ReadPosRankSum=0.220;VQSLOD=3.8290;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:93.31:1300,93,0	0/0:5,0:5:15.04:0,15,216	0/0:21,0:21:49.91:0,50,915	0/0:28,0:29:63.27:0,63,977	0/0:13,0:13:39.13:0,39,620	0/0:18,0:18:48.16:0,48,762	0/0:30,0:30:84.29:0,84,1335	0/0:29,0:29:84.23:0,84,1289	0/0:21,0:21:54.15:0,54,813	0/0:12,0:12:36.11:0,36,552	0/0:13,0:13:36.11:0,36,553	0/0:13,0:13:39.09:0,39,594	0/0:10,0:10:24.08:0,24,383	0/0:12,0:12:33.10:0,33,504	0/0:17,0:17:51.17:0,51,814	1/1:0,15:15:42.14:587,42,0	0/0:38,0:38:99:0,102,1623	0/0:27,0:27:78.27:0,78,1245	0/0:20,0:20:60.20:0,60,957	0/0:6,0:6:18.06:0,18,287	0/0:35,0:35:96.29:0,96,1464	0/0:7,0:7:21.07:0,21,335	0/0:7,0:7:21.07:0,21,330	0/0:14,0:14:36.12:0,36,575	0/0:10,0:10:27.09:0,27,431	0/0:18,0:18:51.09:0,51,736	0/0:14,0:14:39.11:0,39,591	0/0:5,0:5:15.05:0,15,239
chr10	96338230	.	TC	T	8930.97	PASS	AB=0.519;AC=21;AF=0.375;AN=56;BaseQRankSum=13.582;DP=597;FS=7.713;HRun=2;HaplotypeScore=60.3560;InbreedingCoeff=0.9275;MQ=67.81;MQ0=0;MQRankSum=-1.266;QD=35.72;ReadPosRankSum=4.373;VQSLOD=5.1882;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1515	1/1:0,6:6:18.06:234,18,0	0/0:14,0:14:41.81:0,42,581	0/0:10,0:10:30.02:0,30,420	1/1:0,26:26:69.22:896,69,0	0/0:11,0:11:33.10:0,33,474	0/0:30,0:30:90.25:0,90,1304	0/0:41,0:41:99:0,120,1760	0/0:18,0:18:54.18:0,54,803	0/0:28,0:28:84.28:0,84,1258	0/0:17,0:17:51.17:0,51,764	0/0:19,0:19:57.19:0,57,854	0/0:24,0:24:69.23:0,69,1034	0/0:28,0:28:84.28:0,84,1257	1/1:0,28:28:81.26:1052,81,0	0/0:20,0:20:60.20:0,60,897	1/1:0,26:26:66.21:857,66,0	1/1:0,25:25:72.23:935,72,0	1/1:1,20:21:60.07:696,60,0	1/1:0,25:25:72.19:916,72,0	1/1:0,16:16:45.15:584,45,0	0/0:17,0:17:51.17:0,51,764	0/0:12,0:12:36.12:0,36,539	0/0:16,0:16:48.16:0,48,712	1/1:1,22:23:63.20:818,63,0	0/1:2,25:27:8.61:892,0,9	1/1:0,27:27:81.26:1051,81,0	0/0:4,0:4:12.04:0,12,180
chr10	96340633	.	T	TAA	8754.34	PASS	AB=0.818;AC=44;AF=0.786;AN=56;BaseQRankSum=0.300;DP=616;FS=5.680;HRun=11;HaplotypeScore=92.0296;InbreedingCoeff=0.7572;MQ=72.59;MQ0=0;MQRankSum=0.733;QD=17.40;ReadPosRankSum=0.165;VQSLOD=3.9227;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:30:62.74:0,63,594	1/1:1,9:10:24.08:348,24,0	0/0:16,0:15:5.85:0,6,23	0/1:19,0:16:20.17:20,0,114	1/1:5,17:23:59.37:698,59,0	1/1:3,0:26:52.28:180,52,0	0/1:9,0:21:51.78:52,0,53	0/0:35,0:35:74.99:0,75,724	1/1:4,0:17:27.20:94,27,0	1/1:9,0:32:58.38:226,58,0	1/1:5,0:16:25.26:84,25,0	1/1:1,0:16:32.44:111,32,0	1/1:2,0:16:34.93:120,35,0	1/1:5,0:18:19.96:69,20,0	1/1:4,24:29:47.94:810,48,0	0/0:23,0:26:59.81:0,60,561	1/1:4,18:23:45.15:652,45,0	1/1:6,13:22:53.61:680,54,0	1/1:14,20:35:69.91:910,70,0	1/1:6,22:31:77.50:995,77,0	1/1:2,9:11:21.07:304,21,0	1/1:2,0:24:46.44:161,46,0	1/1:6,0:17:22:74,22,0	1/1:1,0:16:32.44:111,32,0	1/1:1,17:20:36.12:506,36,0	1/1:8,16:28:53.62:678,54,0	1/1:4,27:32:60.20:869,60,0	0/0:5,0:5:15.02:0,15,145
chr10	96341524	.	C	CCA	18609.27	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-14.424;DP=844;FS=2.101;HRun=0;HaplotypeScore=126.6584;InbreedingCoeff=0.9856;MQ=78.36;MQ0=0;MQRankSum=-5.135;QD=50.98;ReadPosRankSum=1.556;VQSLOD=5.2292;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,181,2628	0/0:23,0:23:66.20:0,66,950	0/0:21,0:21:57:0,57,749	0/0:18,0:18:42.40:0,42,615	0/0:31,0:31:87.29:0,87,1281	1/1:0,26:27:72.25:1347,72,0	1/1:5,35:40:99:1944,108,0	1/1:4,37:43:99:2102,120,0	1/1:4,23:27:78.27:1431,78,0	1/1:1,29:30:90.29:1654,90,0	1/1:2,23:25:69.21:1245,69,0	1/1:2,30:32:93.32:1739,93,0	1/1:4,20:24:69.13:1200,69,0	1/1:1,20:21:57.18:1035,57,0	0/0:39,0:38:99:0,114,1659	0/0:34,1:35:43.14:0,43,1340	0/0:32,0:32:90.29:0,90,1307	0/0:20,0:20:54.15:0,54,769	0/0:23,0:23:69.23:0,69,1016	0/0:29,0:29:84.26:0,84,1197	0/0:51,0:51:99:0,141,2014	1/1:2,29:31:87.28:1592,87,0	1/1:3,24:27:75.19:1365,75,0	1/1:3,33:36:99:1842,99,0	0/0:27,0:27:78.26:0,78,1147	0/0:32,1:33:43.28:0,43,1322	0/0:34,0:34:99:0,102,1483	1/1:0,2:2:6.02:112,6,0
chr10	96341588	.	C	CAGA	18694.67	PASS	AB=0.935;AC=27;AF=0.482;AN=56;BaseQRankSum=-10.334;DP=865;FS=4.713;HRun=0;HaplotypeScore=132.1318;InbreedingCoeff=0.9001;MQ=75.20;MQ0=0;MQRankSum=-5.929;QD=48.31;ReadPosRankSum=-0.326;VQSLOD=6.5655;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,127,2572	0/0:12,0:12:36.08:0,36,537	0/0:20,0:20:37.27:0,37,603	0/0:16,0:16:2.92:0,3,480	0/0:27,0:27:78.27:0,78,1265	1/1:10,12:22:51.10:942,51,0	1/1:10,32:42:99:2336,117,0	1/1:6,32:42:99:1886,99,0	1/1:3,25:29:78.27:1724,78,0	1/1:5,28:34:87.26:1835,87,0	1/1:3,15:18:48.16:1042,48,0	1/1:3,36:41:96.04:2056,96,0	1/1:4,21:26:66.21:1384,66,0	1/1:4,12:16:45.14:928,45,0	0/0:50,0:49:99:0,138,2177	0/0:52,0:52:99:0,135,2150	0/0:44,0:44:99:0,126,2032	0/0:25,0:25:69.24:0,69,1126	0/0:25,0:25:69.22:0,69,1083	0/0:34,0:34:96.33:0,96,1564	0/0:44,0:44:99:0,126,1932	1/1:5,21:26:69.21:1434,69,0	1/1:4,22:26:60.68:1325,61,0	1/1:6,25:31:69.22:1475,69,0	0/0:31,0:31:93.32:0,93,1514	0/1:27,2:29:58.66:59,0,1007	0/0:40,0:40:99:0,120,1847	1/1:0,5:5:12.04:268,12,0
chr10	96343834	.	C	CATT	30730.96	PASS	AB=0.536;AC=47;AF=0.839;AN=56;BaseQRankSum=-11.015;DP=659;FS=2.435;HRun=0;HaplotypeScore=79.5300;InbreedingCoeff=0.8302;MQ=83.11;MQ0=0;MQRankSum=-8.441;QD=55.17;ReadPosRankSum=3.139;VQSLOD=7.2658;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.23:0,75,1218	1/1:2,11:14:36:717,36,0	0/0:31,0:31:77.19:0,77,1262	0/0:19,0:19:48.02:0,48,636	1/1:2,34:37:95.92:1917,96,0	1/1:3,23:28:60.12:1263,60,0	1/1:1,11:12:27.09:611,27,0	1/1:5,28:34:96.30:2052,96,0	0/1:2,13:15:16.85:646,0,17	1/1:2,20:22:63.22:1398,63,0	1/1:1,20:21:60.08:1259,60,0	1/1:0,18:18:54.12:1172,54,0	1/1:2,18:20:51:1007,51,0	1/1:1,20:23:54.12:1172,54,0	1/1:3,22:25:63.08:1327,63,0	0/0:26,0:26:75.26:0,75,1249	1/1:4,22:26:66.14:1401,66,0	1/1:3,8:13:24.08:543,24,0	1/1:4,13:18:51.18:1152,51,0	1/1:2,41:43:99:2760,129,0	1/1:1,17:18:48.16:1087,48,0	1/1:3,21:25:69.11:1451,69,0	1/1:3,20:24:62.96:1378,63,0	1/1:0,21:21:54.19:1223,54,0	1/1:2,25:27:63.17:1378,63,0	1/1:2,27:30:90.28:1912,90,0	1/1:6,33:40:90.06:1836,90,0	1/1:0,2:2:3.01:68,3,0
chr10	96344296	.	AGTACTT	A	12068.72	PASS	AB=0.526;AC=21;AF=0.375;AN=56;BaseQRankSum=17.018;DP=665;FS=2.267;HRun=0;HaplotypeScore=148.2531;InbreedingCoeff=0.8937;MQ=79.52;MQ0=0;MQRankSum=-16.768;QD=50.92;ReadPosRankSum=0.763;VQSLOD=5.0185;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.28:0,93,3212	1/1:2,11:13:33.11:775,33,0	0/0:16,0:16:45.15:0,45,1376	0/0:24,0:24:72.25:0,72,2358	1/1:1,32:33:60.08:1232,60,0	0/0:28,0:28:84.29:0,84,2979	0/0:32,0:32:96.28:0,96,3197	0/0:28,0:28:84.26:0,84,2761	0/0:22,0:22:63.22:0,63,2199	0/0:21,0:21:60.20:0,60,2000	0/0:26,0:26:78.20:0,78,2634	0/0:26,0:26:78.27:0,78,2764	0/0:32,0:32:84.29:0,84,2860	0/0:22,0:22:63.22:0,63,2243	1/1:1,32:33:87.23:1999,87,0	0/0:38,0:38:99:0,105,3702	1/1:5,10:15:21.07:495,21,0	1/1:2,6:8:12.04:283,12,0	1/1:1,15:16:45.12:947,45,0	1/1:0,18:18:51.14:1153,51,0	1/1:4,17:21:27.05:586,27,0	0/0:24,0:24:72.20:0,72,2407	0/0:17,0:17:48.15:0,48,1570	0/0:37,0:37:99:0,105,3677	1/1:0,15:15:39.13:875,39,0	0/1:3,27:30:99:1753,0,231	1/1:3,32:34:87.26:1970,87,0	0/0:1,0:1:3.01:0,3,107
chr10	96344419	.	CT	C	7959.17	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=14.341;DP=555;FS=17.434;HRun=4;HaplotypeScore=54.9692;InbreedingCoeff=0.9983;MQ=71.68;MQ0=0;MQRankSum=-4.529;QD=31.84;ReadPosRankSum=1.503;VQSLOD=3.2040;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,135,1871	1/1:1,9:10:27.08:324,27,0	0/0:12,0:12:26.98:0,27,351	0/0:14,0:13:38.83:0,39,486	1/1:0,23:23:60.12:700,60,0	0/0:31,0:31:87.24:0,87,1153	0/0:20,0:20:60.19:0,60,823	1/1:1,28:29:81.24:960,81,0	0/0:14,0:14:36.12:0,36,504	0/0:22,0:22:54.16:0,54,724	0/0:16,0:16:45.14:0,45,613	0/0:29,0:29:81.24:0,81,1085	0/0:16,0:16:45.14:0,45,612	0/0:20,0:20:54.13:0,54,677	1/1:0,22:22:60.14:703,60,0	0/0:20,0:20:60.18:0,60,807	1/1:1,25:26:69.21:827,69,0	1/1:0,22:22:54.17:648,54,0	1/1:2,14:16:42.13:504,42,0	1/1:0,12:12:36.11:431,36,0	1/1:0,22:22:60.14:703,60,0	0/0:14,0:14:42.05:0,42,528	0/0:9,0:9:24.07:0,24,318	0/0:20,0:20:60.10:0,60,793	1/1:0,16:16:42.13:504,42,0	1/1:1,23:24:69.21:827,69,0	1/1:0,20:20:51.16:611,51,0	1/1:0,8:8:18.06:216,18,0
chr10	96345174	.	T	TG	1610.83	PASS	AC=32;AF=0.889;AN=36;BaseQRankSum=-0.838;DP=267;FS=0.000;HRun=1;HaplotypeScore=9.5258;InbreedingCoeff=0.3355;MQ=16.48;MQ0=162;MQRankSum=1.117;QD=10.67;ReadPosRankSum=-1.304;VQSLOD=0.7040;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:2:3.01:0,3,39	1/1:0,7:5:14.96:174,15,0	./.	./.	1/1:2,6:4:9.03:134,9,0	1/1:0,11:4:9.03:134,9,0	1/1:1,7:1:2.94:18,3,0	./.	1/1:1,7:2:6.02:90,6,0	1/1:0,7:5:15.05:225,15,0	1/1:1,13:10:3.01:45,3,0	1/1:0,15:5:8.82:134,9,0	1/1:1,3:1:3.01:45,3,0	1/1:1,11:1:3.01:45,3,0	./.	0/0:14,0:2:6.02:0,6,78	1/1:0,13:2:6.02:90,6,0	./.	./.	1/1:0,9:5:8.99:110,9,0	./.	./.	./.	./.	1/1:0,9:5:12:154,12,0	1/1:2,15:5:15.05:225,15,0	1/1:0,7:1:3.01:45,3,0	1/1:0,2:1:3.01:45,3,0
chr10	96346853	.	AAT	A	317.55	PASS	AB=0.868;AC=8;AF=0.235;AN=34;BaseQRankSum=5.067;DP=369;FS=16.226;HRun=0;HaplotypeScore=34.2590;InbreedingCoeff=0.1368;MQ=42.47;MQ0=258;MQRankSum=0.941;QD=2.52;ReadPosRankSum=-0.535;VQSLOD=0.0058;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:3:5.81:0,6,58	./.	0/1:19,0:3:0.38:0,0,20	0/1:22,0:9:6.59:7,0,45	./.	0/0:11,0:3:9.03:0,9,126	./.	./.	0/0:17,0:6:11.54:0,12,124	0/0:24,0:5:11.86:0,12,109	0/0:12,0:1:2.92:0,3,17	0/0:18,0:15:24.25:0,24,294	0/1:15,0:4:3.39:3,0,75	0/0:10,0:5:11.97:0,12,140	0/1:7,11:5:7.70:36,0,8	0/0:15,0:8:8.01:0,8,101	0/0:6,11:1:2.37:0,2,8	./.	./.	./.	./.	./.	./.	0/1:9,0:2:6.01:6,0,36	./.	0/1:7,16:7:0.96:146,0,1	1/1:7,13:10:17.97:226,18,0	0/0:4,0:2:5.88:0,6,35
chr10	96347844	.	C	CT	1861.93	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-0.574;DP=372;FS=2.427;HRun=1;HaplotypeScore=46.9405;InbreedingCoeff=0.8645;MQ=68.40;MQ0=3;MQRankSum=-0.505;QD=13.11;ReadPosRankSum=2.874;VQSLOD=2.7092;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:10:23.96:0,24,144	1/1:0,3:3:3.01:39,3,0	0/0:17,0:9:7.75:0,8,122	0/0:15,0:9:11.84:0,12,97	1/1:3,13:16:12.98:159,13,0	0/0:18,0:18:43.79:0,44,417	0/0:11,0:11:18.03:0,18,194	0/0:19,0:19:47.73:0,48,451	0/0:10,0:10:30.04:0,30,309	0/0:22,0:22:54.06:0,54,536	0/0:17,0:17:44.94:0,45,409	0/0:13,0:13:28.47:0,28,228	0/0:21,0:21:44.90:0,45,410	0/0:12,0:11:32.72:0,33,291	1/1:9,4:13:33.49:300,33,0	0/0:9,0:8:22.74:0,23,175	1/1:5,10:15:10.84:100,11,0	1/1:4,15:19:26.82:337,27,0	1/1:6,14:20:45.50:425,45,0	1/1:7,13:20:0.23:221,0,0	1/1:2,4:6:9.03:121,9,0	0/0:7,0:7:20.91:0,21,181	0/0:11,0:11:18.80:0,19,148	0/0:8,0:8:20.99:0,21,208	1/1:4,6:10:5.09:25,5,0	1/1:1,4:5:9.02:109,9,0	1/1:4,11:15:10.12:231,10,0	0/0:7,0:7:17.98:0,18,168
chr10	96348178	.	A	AG	6920.69	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-8.491;DP=533;FS=8.481;HRun=0;HaplotypeScore=56.8947;InbreedingCoeff=0.9873;MQ=67.81;MQ0=1;MQRankSum=0.373;QD=30.49;ReadPosRankSum=0.984;VQSLOD=3.9902;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1496	1/1:0,6:6:8.90:128,9,0	0/0:12,0:10:29.78:0,30,274	0/0:12,0:12:32.90:0,33,351	1/1:1,23:24:56.98:792,57,0	0/0:29,0:29:87.21:0,87,1163	0/0:6,0:6:18.05:0,18,235	0/0:30,0:28:81.15:0,81,995	0/0:14,0:14:39.08:0,39,475	0/0:26,0:26:78.20:0,78,973	0/0:19,0:19:57.17:0,57,766	0/0:18,0:18:45.14:0,45,605	0/0:16,0:16:43.43:0,43,546	0/0:10,0:10:27.08:0,27,358	1/1:1,19:20:36.59:515,37,0	0/0:28,0:28:75.22:0,75,992	1/1:1,23:24:57.19:813,57,0	1/1:1,13:14:42.12:580,42,0	1/1:3,11:14:32.59:412,33,0	1/1:1,26:27:63.04:879,63,0	1/1:1,11:12:18.06:257,18,0	0/0:9,0:9:24.08:0,24,334	0/0:13,0:13:39.13:0,39,535	0/0:6,0:6:18.04:0,18,217	1/1:3,24:27:50.29:799,50,0	1/1:4,19:23:39.24:667,39,0	1/1:3,33:36:66.77:1079,67,0	0/0:19,0:19:57.19:0,57,789
chr10	96348300	.	G	GCCC	14119.39	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=12.053;DP=614;FS=4.190;HRun=3;HaplotypeScore=93.0514;InbreedingCoeff=0.9975;MQ=80.75;MQ0=0;MQRankSum=-5.821;QD=54.94;ReadPosRankSum=0.963;VQSLOD=4.4871;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1775	0/0:5,0:5:15.05:0,15,240	0/0:20,0:20:54.18:0,54,836	0/0:25,0:25:51.21:0,51,935	0/0:21,0:21:48.16:0,48,764	1/1:1,22:23:57.20:1264,57,0	1/1:4,12:18:36.05:720,36,0	1/1:8,24:32:87.28:1900,87,0	1/1:0,24:26:66.23:1493,66,0	1/1:4,24:29:84.25:1755,84,0	1/1:1,14:16:39.13:884,39,0	1/1:0,14:14:42.14:922,42,0	1/1:3,11:13:39.10:809,39,0	1/1:1,12:13:39.13:856,39,0	0/0:21,0:21:63.20:0,63,985	0/0:30,0:30:81.26:0,81,1273	0/0:33,0:33:96.33:0,96,1525	0/0:10,0:10:24.08:0,24,384	0/0:16,0:16:45.14:0,45,696	0/0:20,0:20:57.19:0,57,912	0/0:46,0:46:99:0,126,1991	1/1:4,14:18:39.13:855,39,0	1/1:4,16:20:42.10:902,42,0	1/1:3,15:18:39.09:836,39,0	0/0:19,0:19:54.18:0,54,864	0/0:30,0:30:90.29:0,90,1394	0/0:23,0:22:63.21:0,63,1007	1/1:0,15:15:42.14:924,42,0
chr10	96349010	.	A	AGG	2412.01	PASS	AB=0.990;AC=35;AF=0.625;AN=56;BaseQRankSum=-1.095;DP=559;FS=4.040;HRun=1;HaplotypeScore=129.7891;InbreedingCoeff=0.2486;MQ=70.70;MQ0=5;MQRankSum=-3.053;QD=5.52;ReadPosRankSum=-1.178;VQSLOD=-0.5625;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:21.53:0,22,137	1/1:11,0:11:14.94:60,15,0	0/1:15,0:11:0:0,0,139	0/0:13,0:14:1.13:0,1,241	0/1:23,0:23:38.52:75,0,39	1/1:33,1:34:26.79:251,27,0	1/1:19,1:19:24.40:145,24,0	0/1:45,0:45:54.80:55,0,68	1/1:19,1:20:14.33:129,14,0	0/1:25,0:25:33.98:100,0,34	1/1:20,1:20:6.27:149,6,0	0/1:23,0:23:8.26:136,0,8	1/1:11,0:11:16.22:90,16,0	0/1:12,0:12:8.38:35,0,8	1/1:24,1:25:15.15:213,15,0	0/0:28,0:28:22.22:0,22,104	0/0:28,0:28:48.32:0,48,414	0/0:10,0:10:0.79:0,1,100	1/1:13,1:14:6.97:129,7,0	1/1:28,1:28:13.96:206,14,0	1/1:10,0:10:0.53:67,1,0	0/1:18,1:19:24.45:94,0,24	1/1:22,0:22:34.33:197,34,0	0/1:7,0:7:3.83:22,0,4	1/1:13,1:14:32.29:174,32,0	0/1:25,1:24:14.37:201,0,14	1/1:11,0:11:13.76:61,14,0	0/0:9,0:9:16.46:0,16,50
chr10	96349012	.	G	GA	4650.09	PASS	AB=0.729;AC=36;AF=0.643;AN=56;BaseQRankSum=-8.726;DP=615;FS=1.276;HRun=14;HaplotypeScore=127.9331;InbreedingCoeff=0.5668;MQ=71.29;MQ0=5;MQRankSum=0.316;QD=10.59;ReadPosRankSum=-0.578;VQSLOD=3.3592;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:52.10:0,52,187	1/1:3,9:12:21:185,21,0	0/1:21,0:12:2.16:2,0,19	0/0:19,0:16:13.11:0,13,94	1/1:9,18:27:3.36:245,3,0	1/1:13,23:36:32.84:514,33,0	1/1:10,9:19:35.16:308,35,0	0/0:43,0:45:67.18:0,67,243	1/1:14,8:22:31.01:355,31,0	0/1:21,7:28:25.57:187,0,26	1/1:8,11:18:7.56:170,8,0	1/1:8,16:24:16.45:247,16,0	1/1:4,10:14:14.99:128,15,0	1/1:7,7:14:1.75:139,2,0	1/1:16,12:28:15.27:360,15,0	0/0:28,0:28:42.77:0,43,135	0/0:28,0:28:61.38:0,61,398	0/0:12,0:12:23.14:0,23,138	1/1:8,9:17:9.11:209,9,0	1/1:11,19:30:21.79:325,22,0	0/1:4,6:10:2.09:92,0,2	0/1:7,14:21:2.36:213,0,2	1/1:6,15:21:27.42:231,27,0	0/1:4,4:8:1.04:21,0,1	1/1:4,14:18:32.83:278,33,0	0/1:16,14:28:25.76:257,0,26	1/1:2,15:17:21:185,21,0	0/0:9,0:10:14.23:0,14,42
chr10	96349453	.	ACGCGCGCGCG	A	2857.08	PASS	AB=0.985;AC=36;AF=0.692;AN=52;BaseQRankSum=-0.755;DP=391;FS=34.735;HRun=0;HaplotypeScore=139.2371;InbreedingCoeff=-0.2589;MQ=46.74;MQ0=2;MQRankSum=-2.220;QD=8.16;ReadPosRankSum=-0.433;VQSLOD=1.0770;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:40:78.75:900,0,79	1/1:9,0:9:6:85,6,0	0/0:13,0:7:15:0,15,135	0/1:16,0:13:6.79:7,0,136	1/1:17,2:19:4.35:27,4,0	1/1:19,0:18:9:125,9,0	1/1:17,0:17:6.01:86,6,0	0/1:22,0:22:41.92:309,0,42	1/1:11,0:11:2.99:24,3,0	0/1:15,0:15:83.77:268,0,84	./.	1/1:18,0:18:0.47:1,0,0	0/1:7,0:7:24.74:136,0,25	0/1:17,0:17:17.08:70,0,17	1/1:15,0:16:3.01:37,3,0	0/1:16,0:15:99:443,0,102	0/1:9,1:10:64.20:88,0,64	0/1:8,0:8:13.98:14,0,23	0/1:9,0:8:19.08:19,0,36	1/1:14,0:14:2.54:19,3,0	1/1:7,0:6:6.02:115,6,0	1/1:7,0:7:3.88:27,4,0	1/1:16,0:15:3:25,3,0	./.	1/1:8,2:11:3.01:54,3,0	0/1:14,1:14:91.58:92,0,187	0/1:11,0:11:30.72:31,0,91	0/0:3,0:3:2.68:0,3,11
chr10	96349461	.	GCGCA	G	1028.84	PASS	AB=0.963;AC=25;AF=0.500;AN=50;BaseQRankSum=-0.978;DP=231;FS=19.772;HRun=0;HaplotypeScore=88.4923;InbreedingCoeff=0.2605;MQ=55.91;MQ0=2;MQRankSum=-1.813;QD=7.40;ReadPosRankSum=2.927;VQSLOD=0.5777;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:36.11:280,36,0	0/1:4,0:4:4.49:4,0,32	0/0:8,0:5:7.60:0,8,71	0/0:8,0:5:2.53:0,3,11	0/0:14,0:14:20.20:0,20,139	1/1:9,0:8:2.87:46,3,0	1/1:7,0:7:3.01:46,3,0	1/1:10,0:10:8.17:199,8,0	./.	0/1:8,2:10:37.22:178,0,37	./.	0/1:9,1:10:0:0,0,0	1/1:4,0:4:5.65:116,6,0	0/1:10,0:10:22.76:38,0,23	0/0:9,0:9:1.17:0,1,83	1/1:11,0:10:18.03:172,18,0	0/1:6,0:6:17.73:18,0,112	0/0:2,0:2:3.01:0,3,33	0/0:2,0:2:6:0,6,59	0/0:8,0:8:20.79:0,21,145	1/1:5,0:4:5.64:26,6,0	1/1:5,0:5:2.98:23,3,0	./.	1/1:3,0:3:2.96:19,3,0	0/0:11,0:11:1.17:0,1,83	0/1:8,0:8:15.39:15,0,202	0/0:8,0:8:12.04:0,12,155	0/1:2,0:2:0:0,0,0
chr10	96349465	.	A	ACG	464.68	PASS	AB=1.000;AC=19;AF=0.380;AN=50;BaseQRankSum=-3.085;DP=239;FS=15.580;HRun=0;HaplotypeScore=101.6107;InbreedingCoeff=0.6200;MQ=66.48;MQ0=2;MQRankSum=-0.016;QD=6.64;ReadPosRankSum=1.395;VQSLOD=2.4220;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:21.65:0,22,104	0/0:4,0:4:8.54:0,9,51	0/0:9,0:9:10.55:0,11,91	0/0:7,0:5:3.38:0,3,10	0/0:13,0:13:21.24:0,21,141	1/1:9,0:9:2.74:12,3,0	1/1:7,0:7:2.80:13,3,0	0/1:13,0:13:7.93:144,0,8	1/1:5,0:5:2.99:24,3,0	1/1:10,0:10:26.61:175,27,0	./.	0/0:10,0:10:0:0,0,0	1/1:4,0:4:11.12:57,11,0	1/1:10,0:11:8.55:91,9,0	0/0:10,0:10:17.80:0,18,119	0/0:9,0:8:16.31:0,16,71	0/0:8,0:8:11.46:0,11,98	1/1:2,0:2:2.22:7,2,0	0/0:7,0:7:8.96:0,9,70	0/0:8,0:8:23.79:0,24,168	0/0:6,0:5:11.91:0,12,86	1/1:5,0:5:3:41,3,0	./.	1/1:4,0:4:5.97:62,6,0	0/0:11,0:11:17.79:0,18,120	0/0:11,0:11:2.76:0,3,100	0/0:6,0:6:11.88:0,12,81	./.
chr10	96349513	.	G	GAA	2082.83	PASS	AB=0.811;AC=22;AF=0.393;AN=56;BaseQRankSum=-1.564;DP=482;FS=0.000;HRun=14;HaplotypeScore=107.0570;InbreedingCoeff=0.6794;MQ=66.55;MQ0=1;MQRankSum=-1.148;QD=10.16;ReadPosRankSum=-3.987;VQSLOD=1.3943;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:38:43.21:0,43,362	1/1:2,7:11:26.40:303,26,0	0/0:28,0:17:9.18:0,9,58	0/1:15,0:9:15.84:17,0,16	1/1:8,5:16:20.84:164,21,0	0/0:14,0:16:17.33:0,17,137	0/0:14,0:14:26.68:0,27,225	0/0:19,0:25:43.25:0,43,296	0/0:11,0:11:26.86:0,27,225	0/0:13,0:15:29.15:0,29,223	0/0:10,0:10:8.85:0,9,117	0/0:20,0:22:44.08:0,44,349	0/0:12,0:15:16.52:0,17,159	0/0:14,0:17:25.88:0,26,185	1/1:7,7:19:13.32:170,13,0	0/0:21,0:26:37.58:0,38,334	1/1:8,12:23:31.72:343,32,0	1/1:1,6:7:3.01:39,3,0	1/1:4,7:14:26.98:293,27,0	0/1:4,9:14:9.85:188,0,10	1/1:2,1:5:7.75:56,8,0	0/0:12,0:15:17.20:0,17,165	0/1:17,0:18:5.54:6,0,143	0/0:12,0:13:12.86:0,13,165	0/1:12,8:22:4.05:151,0,4	1/1:9,13:25:41.98:406,42,0	1/1:4,10:16:14.39:150,14,0	0/0:7,0:10:20.40:0,20,149
chr10	96350418	.	GA	G	2237.15	PASS	AB=0.826;AC=27;AF=0.482;AN=56;BaseQRankSum=-5.227;DP=482;FS=5.026;HRun=14;HaplotypeScore=76.1563;InbreedingCoeff=0.7179;MQ=48.90;MQ0=42;MQRankSum=4.497;QD=8.95;ReadPosRankSum=1.076;VQSLOD=3.0986;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:41.19:0,41,361	0/0:1,0:1:2.90:0,3,16	0/0:48,0:7:2.84:0,3,24	0/1:45,0:9:7.30:7,0,63	0/0:13,0:13:34.46:0,34,281	1/1:2,9:11:26.63:217,27,0	1/1:2,11:12:20.95:169,21,0	1/1:7,17:23:28.41:353,28,0	1/1:2,12:13:11.94:92,12,0	1/1:3,9:11:23.93:193,24,0	1/1:4,17:21:39.19:312,39,0	1/1:18,6:22:33.28:343,33,0	1/1:0,14:14:5.99:48,6,0	1/1:1,11:12:14.91:113,15,0	0/0:21,0:19:30.23:0,30,222	0/0:17,0:14:19.84:0,20,190	0/0:20,1:20:13.33:0,13,252	0/0:10,0:10:17.71:0,18,149	0/0:21,0:16:44.49:0,44,384	0/0:13,0:13:33.93:0,34,236	0/0:6,0:5:14.40:0,14,101	0/1:3,7:9:10.98:123,0,11	1/1:2,11:12:23.90:192,24,0	1/1:3,18:19:20.95:169,21,0	0/1:7,1:8:8.15:8,0,55	0/0:15,0:13:8.74:0,9,224	0/0:19,0:15:12.05:0,12,148	1/1:7,1:8:14.84:112,15,0
chr10	96350433	.	AAAAAC	A	2981.91	PASS	AB=0.595;AC=20;AF=0.357;AN=56;BaseQRankSum=0.961;DP=497;FS=7.742;HRun=0;HaplotypeScore=96.1042;InbreedingCoeff=0.7259;MQ=47.89;MQ0=31;MQRankSum=-4.830;QD=19.24;ReadPosRankSum=1.247;VQSLOD=2.4810;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:48.16:0,48,1230	1/1:1,0:1:3.01:57,3,0	0/0:48,0:7:6.91:0,7,160	0/0:43,0:8:8.52:0,9,141	1/1:6,10:16:21.07:363,21,0	0/0:13,0:13:33.58:0,34,799	0/0:17,0:16:30.10:0,30,699	0/0:28,0:27:67.11:0,67,1670	0/0:16,0:15:11.16:0,11,162	0/0:10,0:9:15.05:0,15,349	0/0:21,0:21:36.12:0,36,893	0/0:20,0:19:45.15:0,45,1101	0/0:15,0:15:3.01:0,3,85	0/0:13,0:13:20.78:0,21,481	1/1:8,13:20:20.96:354,21,0	0/0:17,0:16:27.09:0,27,671	1/1:8,11:19:15.05:283,15,0	1/1:5,5:9:9.03:170,9,0	1/1:14,9:17:27.09:493,27,0	0/1:4,9:13:43.17:433,0,43	1/1:8,1:8:12.04:209,12,0	0/0:8,0:8:18.02:0,18,354	0/0:13,0:13:24.08:0,24,629	0/0:23,0:22:29.99:0,30,590	1/1:3,2:5:6.02:93,6,0	0/1:5,10:14:22.38:392,0,22	1/1:10,13:20:18.06:335,18,0	0/0:10,0:10:24.08:0,24,575
chr10	96350650	.	T	TA	1575.52	PASS	AB=0.904;AC=24;AF=0.444;AN=54;BaseQRankSum=-0.515;DP=335;FS=9.144;HRun=13;HaplotypeScore=48.8283;InbreedingCoeff=0.5360;MQ=49.80;MQ0=14;MQRankSum=1.724;QD=9.55;ReadPosRankSum=-0.026;VQSLOD=1.7297;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:29:40.56:0,41,269	./.	0/0:4,0:2:5.85:0,6,36	0/1:8,0:3:14.36:20,0,14	0/0:7,0:7:11.86:0,12,82	1/1:6,14:20:36.04:334,36,0	1/1:5,4:10:14.88:124,15,0	0/0:24,0:19:29.66:0,30,205	1/1:5,5:9:15.02:139,15,0	1/1:7,7:13:15:135,15,0	1/1:5,11:16:27.03:250,27,0	1/1:1,5:5:12.01:111,12,0	1/1:8,7:16:29.83:257,30,0	0/1:8,2:9:11.57:47,0,12	0/0:11,0:10:26.73:0,27,183	0/1:13,1:13:7.04:7,0,102	0/1:14,3:16:56.71:57,0,97	0/0:18,2:20:10.71:0,11,211	0/0:9,0:8:13.06:0,13,73	0/0:7,1:7:20.83:0,21,144	0/0:4,0:2:2.98:0,3,21	1/1:5,3:7:11.68:94,12,0	1/1:3,2:5:5.93:45,6,0	1/1:4,6:9:0.46:147,0,0	0/0:3,0:3:2.96:0,3,21	0/0:10,0:6:8.29:0,8,49	0/0:13,0:13:32.65:0,33,222	0/0:21,1:22:1.86:0,2,157
chr10	96350721	.	AGACC	A	963.03	PASS	AB=0.980;AC=23;AF=0.411;AN=56;BaseQRankSum=7.646;DP=357;FS=12.042;HRun=0;HaplotypeScore=95.6251;InbreedingCoeff=-0.3047;MQ=51.50;MQ0=12;MQRankSum=-5.213;QD=4.03;ReadPosRankSum=4.309;VQSLOD=0.1333;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:1.64:0,2,138	0/1:8,0:8:24.83:25,0,25	0/1:30,0:7:28.38:28,0,61	0/0:19,0:10:25.52:0,26,215	0/1:13,1:14:20.79:83,0,21	0/1:12,0:11:38.79:46,0,39	0/1:9,0:9:8.97:22,0,9	0/0:17,0:16:1.40:0,1,78	1/1:12,0:12:12.22:72,12,0	0/0:4,0:4:10.64:0,11,57	1/1:7,1:7:8.46:108,8,0	0/1:16,0:16:11.56:164,0,12	0/1:13,0:13:12.94:78,0,13	1/1:6,0:6:9.51:65,10,0	0/1:11,0:11:17.64:18,0,91	0/0:21,1:21:14.35:0,14,114	0/1:10,1:10:29.26:29,0,93	0/1:10,0:9:33.14:33,0,51	0/1:15,1:14:99:111,0,119	0/1:9,0:9:18.23:18,0,66	0/0:1,0:1:2.50:0,2,9	0/1:9,0:9:7.83:50,0,8	0/1:8,0:8:7.73:27,0,8	0/1:8,0:7:37.95:38,0,41	0/1:11,2:13:99:100,0,119	0/0:13,0:13:11.46:0,11,215	0/0:13,1:13:20.33:0,20,156	0/1:16,0:14:11.84:12,0,34
chr10	96350722	.	GACCAAAAAAAA	G	4447.19	PASS	AB=0.692;AC=25;AF=0.446;AN=56;BaseQRankSum=0.214;DP=359;FS=6.836;HRun=0;HaplotypeScore=122.2023;InbreedingCoeff=0.6862;MQ=51.18;MQ0=12;MQRankSum=1.809;QD=29.45;ReadPosRankSum=2.307;VQSLOD=3.5779;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:47.46:0,47,1044	0/0:5,0:8:17.92:0,18,226	0/0:29,0:7:3.35:0,3,54	0/0:19,0:10:10.85:0,11,371	0/0:8,0:14:30.63:0,31,414	1/1:6,6:11:25.39:405,25,0	1/1:1,8:9:8.95:191,9,0	1/1:2,15:16:40.80:367,41,0	1/1:1,11:12:15.04:378,15,0	1/1:4,0:4:8.15:99,8,0	1/1:5,2:7:17.99:324,18,0	1/1:2,13:15:39.02:1006,39,0	1/1:2,11:13:18.37:530,18,0	1/1:1,5:6:6.86:344,7,0	0/0:7,0:13:15.30:0,15,243	0/0:22,0:21:36.12:0,36,1024	0/0:8,0:10:2.01:0,2,266	0/0:6,0:10:17.42:0,17,235	0/0:8,0:15:37.43:0,37,556	0/0:7,0:9:23.32:0,23,363	0/0:0,0:1:3.01:0,3,37	1/1:1,8:9:17.85:262,18,0	0/1:2,6:8:9.90:112,0,10	1/1:6,2:7:17.75:191,18,0	0/1:7,0:14:44.24:44,0,472	0/0:7,0:11:32.86:0,33,359	0/0:9,0:12:19.41:0,19,353	0/1:4,12:14:5:193,0,5
chr10	96350723	.	ACC	A	1800.21	PASS	AB=0.981;AC=43;AF=0.768;AN=56;BaseQRankSum=2.416;DP=351;FS=1.920;HRun=2;HaplotypeScore=82.5393;InbreedingCoeff=-0.0012;MQ=51.31;MQ0=13;MQRankSum=-0.077;QD=5.44;ReadPosRankSum=3.993;VQSLOD=-0.1280;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,20:26:43.11:277,43,0	1/1:8,0:8:9.55:46,10,0	0/1:27,0:6:16.13:16,0,42	0/0:19,0:10:5.83:0,6,30	1/1:15,0:15:8.01:96,8,0	1/1:11,1:11:13.75:96,14,0	1/1:9,0:9:5.82:34,6,0	1/1:16,0:15:2.41:23,2,0	1/1:11,1:12:14.78:99,15,0	1/1:4,0:4:6.75:20,7,0	1/1:7,0:6:5.17:109,5,0	1/1:14,1:15:31.95:218,32,0	1/1:13,0:13:18.59:112,19,0	1/1:6,0:6:6.77:66,7,0	0/1:13,0:13:19.33:19,0,38	1/1:1,20:20:35.89:281,36,0	1/1:10,1:9:6.07:52,6,0	0/1:11,0:10:23.12:25,0,23	0/1:17,0:15:14.91:61,0,15	0/1:8,1:9:1.64:38,0,2	0/0:1,0:1:1.82:0,2,5	0/1:9,0:9:5.70:57,0,6	1/1:8,0:8:0.61:15,1,0	1/1:6,1:6:12.25:62,12,0	0/1:13,1:14:34.29:63,0,34	1/1:11,0:11:5.25:37,5,0	0/1:13,0:11:0.24:0,0,7	0/1:16,0:14:11.53:19,0,12
chr10	96351017	.	GC	G	19112.59	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=3.119;DP=655;FS=16.039;HRun=2;HaplotypeScore=72.2389;InbreedingCoeff=0.9993;MQ=75.77;MQ0=0;MQRankSum=-3.843;QD=33.65;ReadPosRankSum=4.585;VQSLOD=3.3818;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.17:0,84,1195	1/1:0,9:8:24.04:292,24,0	0/0:16,0:16:41.79:0,42,547	0/0:16,0:16:48.16:0,48,691	1/1:0,29:29:63.09:777,63,0	1/1:0,22:22:57.19:740,57,0	1/1:1,17:18:42.14:543,42,0	1/1:4,28:32:75.22:944,75,0	1/1:0,21:21:51.17:662,51,0	1/1:1,22:23:66.21:854,66,0	1/1:0,13:13:33.11:428,33,0	1/1:0,26:26:66.21:852,66,0	1/1:0,28:28:78.25:1012,78,0	1/1:0,21:21:57.19:738,57,0	1/1:0,23:23:54.18:701,54,0	0/0:27,0:27:81.26:0,81,1191	1/1:0,27:27:69.22:895,69,0	1/1:1,17:18:51.17:662,51,0	1/1:1,21:22:63.19:803,63,0	1/1:1,27:28:75.20:954,75,0	1/1:1,19:20:48.16:622,48,0	1/1:1,31:32:78.22:994,78,0	1/1:0,27:27:72.05:934,72,0	1/1:0,24:24:72.23:935,72,0	1/1:0,15:15:39.13:506,39,0	1/1:0,29:29:84.27:1088,84,0	1/1:0,39:39:99:1360,105,0	1/1:0,22:22:63.20:818,63,0
chr10	96351264	.	GC	G	4124.41	PASS	AB=0.529;AC=51;AF=0.911;AN=56;BaseQRankSum=5.247;DP=198;FS=11.634;HRun=5;HaplotypeScore=78.3683;InbreedingCoeff=0.4588;MQ=55.34;MQ0=11;MQRankSum=-4.091;QD=23.70;ReadPosRankSum=3.199;VQSLOD=2.3267;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,6:7:12.03:128,12,0	1/1:0,5:5:15.04:170,15,0	0/0:16,0:10:24.56:0,25,339	0/0:8,0:6:18.01:0,18,224	1/1:1,7:7:15.04:170,15,0	1/1:0,9:9:24.07:272,24,0	1/1:2,1:1:3.01:34,3,0	1/1:0,7:7:21.03:218,21,0	1/1:3,5:6:12.03:136,12,0	1/1:2,6:6:18.04:195,18,0	1/1:0,5:5:15.04:169,15,0	1/1:1,2:2:6.02:68,6,0	0/1:1,8:9:8.71:152,0,9	1/1:1,8:9:24.07:272,24,0	1/1:2,10:10:27.08:305,27,0	1/1:0,10:10:30.09:340,30,0	1/1:0,3:3:6.02:68,6,0	1/1:2,3:4:9.03:102,9,0	1/1:2,0:2:6.01:60,6,0	1/1:2,8:9:15.04:170,15,0	1/1:3,7:8:6.02:68,6,0	1/1:0,4:4:12.03:136,12,0	1/1:0,3:3:6.02:68,6,0	1/1:1,6:6:18.05:204,18,0	1/1:0,11:11:24.07:272,24,0	1/1:2,7:8:1.71:215,2,0	1/1:0,2:2:6.02:68,6,0	1/1:0,5:5:6.02:68,6,0
chr10	96351424	.	A	ATGAT	14591.59	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-11.582;DP=671;FS=0.321;HRun=0;HaplotypeScore=110.5977;InbreedingCoeff=0.9952;MQ=79.35;MQ0=0;MQRankSum=-1.320;QD=56.12;ReadPosRankSum=3.242;VQSLOD=6.4318;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:63.22:0,63,1146	1/1:2,5:7:12.04:314,12,0	0/0:20,0:20:48.16:0,48,846	0/0:17,0:17:39.11:0,39,662	1/1:3,28:36:66.03:1391,66,0	0/0:24,0:24:57.20:0,57,1036	0/0:25,0:25:57.19:0,57,1035	0/0:35,0:35:96.32:0,96,1693	0/0:16,0:16:42.14:0,42,752	0/0:28,0:28:81.22:0,81,1383	0/0:26,0:26:66.20:0,66,1139	0/0:26,0:26:66.23:0,66,1184	0/0:25,0:25:72.25:0,72,1308	0/0:22,0:22:57.20:0,57,1032	1/1:6,25:32:72.25:1882,72,0	0/0:26,0:26:62.88:0,63,1087	1/1:2,19:21:51.18:1317,51,0	1/1:3,14:17:33.11:864,33,0	1/1:1,12:13:36.12:896,36,0	1/1:3,25:30:78.19:1927,78,0	1/1:3,25:28:72.72:1843,73,0	0/0:26,0:26:78.25:0,78,1381	0/0:36,0:36:99:0,99,1742	0/0:21,0:21:48.12:0,48,828	1/1:2,18:22:51.17:1208,51,0	1/1:5,20:25:60.16:1501,60,0	1/1:7,21:29:57.19:1448,57,0	0/0:9,0:9:24.08:0,24,415
chr10	96351625	.	C	CAATAA	35570.72	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.404;DP=625;FS=1.518;HRun=0;HaplotypeScore=86.3602;InbreedingCoeff=0.9786;MQ=79.71;MQ0=0;MQRankSum=-8.770;QD=60.60;ReadPosRankSum=5.070;VQSLOD=5.6000;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:26:57.19:1639,57,0	1/1:4,12:16:33.11:993,33,0	0/0:25,0:25:58.67:0,59,938	0/0:13,0:13:30.08:0,30,556	1/1:6,21:29:60.16:1660,60,0	1/1:4,16:23:36.12:1084,36,0	1/1:7,12:19:30.10:899,30,0	1/1:19,17:41:75.20:1771,75,0	1/1:2,13:16:33.11:993,33,0	1/1:5,29:36:96.28:2714,96,0	1/1:4,18:24:45.10:1119,45,0	1/1:3,16:20:54.19:1610,54,0	1/1:4,8:13:27.09:798,27,0	1/1:5,11:16:30.07:818,30,0	1/1:4,25:29:75.26:2191,75,0	1/1:6,19:26:60.21:1762,60,0	1/1:3,15:20:51.13:1410,51,0	1/1:0,9:9:18.06:542,18,0	1/1:6,20:28:72.24:1975,72,0	1/1:6,22:29:57.19:1715,57,0	1/1:1,5:6:12.04:362,12,0	1/1:3,15:17:36.02:1027,36,0	1/1:8,20:28:63.21:1826,63,0	1/1:4,13:17:39.13:1172,39,0	1/1:3,17:22:51.17:1531,51,0	1/1:5,15:20:48.16:1412,48,0	1/1:7,16:27:51.17:1534,51,0	1/1:6,17:24:36.08:1014,36,0
chr10	96352215	.	TGCCACTTGGTCTGAGCC	T	18390.69	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=17.621;DP=598;FS=7.638;HRun=0;HaplotypeScore=256.8498;InbreedingCoeff=0.9823;MQ=83.15;MQ0=0;MQRankSum=-12.578;QD=76.63;ReadPosRankSum=2.750;VQSLOD=3.5305;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,8866	0/0:8,0:8:24.08:0,24,1785	0/0:17,0:17:48.13:0,48,2133	0/0:24,0:24:49.22:0,49,2471	0/0:23,0:23:69.22:0,69,4960	1/1:1,23:24:27.09:1326,27,0	1/1:0,14:14:9.03:442,9,0	1/1:0,21:21:61.67:702,62,0	1/1:0,17:17:27.09:1325,27,0	1/1:1,13:13:38.89:1281,39,0	1/1:2,16:18:41.63:1662,42,0	1/1:2,37:39:78.27:3830,78,0	1/1:1,16:17:36.12:1767,36,0	1/1:1,17:18:39.13:1913,39,0	0/0:30,0:30:87.23:0,87,5832	0/0:25,0:25:75.19:0,75,4591	0/0:43,0:42:99:0,129,8974	0/0:13,0:13:39.11:0,39,2651	0/0:14,0:14:42.09:0,42,2049	0/0:22,0:22:60.16:0,60,4144	0/0:25,0:25:69.21:0,69,4583	1/1:1,16:16:35.91:1635,36,0	1/1:0,12:10:19.31:887,19,0	1/1:1,21:22:24.08:1179,24,0	0/0:13,0:13:39.12:0,39,2710	0/0:24,0:24:69.22:0,69,5114	0/0:28,0:28:78.13:0,78,4828	1/1:0,7:7:9.03:442,9,0
chr10	96353555	.	CTA	C	20891.78	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.390;DP=709;FS=0.000;HRun=0;HaplotypeScore=93.1463;InbreedingCoeff=0.9926;MQ=71.49;MQ0=5;MQRankSum=-6.612;QD=30.63;ReadPosRankSum=4.007;VQSLOD=6.8068;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,31:39:87.28:1119,87,0	1/1:0,12:12:32.94:425,33,0	0/0:13,0:13:26.97:0,27,356	0/0:14,0:14:17.71:0,18,272	1/1:2,28:30:72.23:926,72,0	1/1:3,21:24:57.19:733,57,0	1/1:1,20:21:48.16:618,48,0	1/1:11,24:33:72.22:913,72,0	1/1:5,26:31:72.23:926,72,0	1/1:5,28:31:81.24:1015,81,0	1/1:1,10:9:21.07:270,21,0	1/1:6,31:36:69.22:887,69,0	1/1:2,21:23:60.19:772,60,0	1/1:3,17:20:51.17:656,51,0	1/1:5,32:37:90.29:1158,90,0	1/1:4,30:33:81.26:1042,81,0	1/1:0,24:24:69.22:888,69,0	1/1:1,13:14:33.11:423,33,0	1/1:4,25:28:72.21:906,72,0	1/1:4,21:25:60.19:772,60,0	1/1:1,19:20:45.15:579,45,0	1/1:3,27:30:78.25:1004,78,0	1/1:1,21:22:60.20:772,60,0	1/1:1,15:16:42.14:540,42,0	1/1:2,22:24:63.20:808,63,0	1/1:2,27:29:78.25:1004,78,0	1/1:6,32:38:84.27:1080,84,0	1/1:0,24:24:51.17:656,51,0
chr10	96353714	.	G	GACATTA	59917.53	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.183;DP=788;FS=30.317;HRun=0;HaplotypeScore=163.4031;InbreedingCoeff=0.9993;MQ=74.77;MQ0=0;MQRankSum=-11.649;QD=81.74;ReadPosRankSum=4.981;VQSLOD=3.4988;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,29:40:92.23:3006,92,0	1/1:2,8:10:30.03:999,30,0	0/0:28,0:28:64.47:0,64,1566	0/0:27,0:27:75.26:0,75,1708	1/1:7,20:31:71.98:1856,72,0	1/1:7,21:29:80.99:2540,81,0	1/1:5,17:25:57.19:1924,57,0	1/1:16,14:34:99:3037,99,0	1/1:12,23:38:99:3274,99,0	1/1:2,21:28:81.26:2582,81,0	1/1:4,11:16:38.89:1052,39,0	1/1:6,31:44:99:3261,102,0	1/1:8,28:36:96.26:3224,96,0	1/1:11,22:35:96.12:2990,96,0	1/1:7,43:52:99:4098,138,0	1/1:3,38:45:99:3998,117,0	1/1:5,17:24:54.19:1912,54,0	1/1:2,11:13:36.12:1308,36,0	1/1:8,15:25:72.23:2439,72,0	1/1:5,19:24:69.10:1985,69,0	1/1:4,12:18:35.91:1016,36,0	1/1:5,15:20:51.17:1622,51,0	1/1:5,14:19:50.92:1404,51,0	1/1:1,21:23:38.99:1165,39,0	1/1:1,20:26:63.22:2174,63,0	1/1:10,23:36:99:3595,108,0	1/1:3,22:31:71.98:2429,72,0	1/1:1,9:10:30.10:1028,30,0
chr10	96355062	.	T	TA	4633.97	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-8.416;DP=475;FS=37.832;HRun=12;HaplotypeScore=75.7560;InbreedingCoeff=0.7490;MQ=60.08;MQ0=1;MQRankSum=0.923;QD=12.94;ReadPosRankSum=0.219;VQSLOD=2.1043;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:33:48.83:0,49,143	1/1:0,9:9:24.04:233,24,0	0/0:12,0:10:2.68:0,3,100	0/1:12,0:9:8.12:8,0,50	1/1:2,21:24:53.78:480,54,0	1/1:6,1:23:20.36:101,20,0	1/1:2,0:5:8.52:43,9,0	0/0:5,0:35:58.58:0,59,171	1/1:3,0:11:20.46:104,20,0	1/1:7,0:20:38.73:233,39,0	1/1:5,1:21:37.42:206,37,0	1/1:3,0:11:22.73:114,23,0	1/1:2,0:7:8.99:44,9,0	1/1:3,0:10:11.36:57,11,0	1/1:6,10:16:11.14:270,11,0	0/0:2,0:13:20.36:0,20,60	1/1:5,21:27:16.11:467,16,0	1/1:4,17:21:7.26:394,7,0	1/1:5,14:20:16.82:298,17,0	1/1:6,8:15:20.87:189,21,0	1/1:1,3:4:9.01:88,9,0	1/1:3,0:6:5.68:29,6,0	1/1:7,0:16:17.51:87,18,0	1/1:7,0:10:8.52:43,9,0	1/1:0,23:23:60.09:579,60,0	1/1:7,14:21:18.80:268,19,0	1/1:5,16:20:14.15:299,14,0	0/0:2,0:18:37.61:0,38,123
chr10	96355460	.	GT	G	3878.76	PASS	AB=0.615;AC=25;AF=0.446;AN=56;BaseQRankSum=6.446;DP=554;FS=2.170;HRun=10;HaplotypeScore=98.7663;InbreedingCoeff=0.8731;MQ=64.67;MQ0=8;MQRankSum=-2.927;QD=16.23;ReadPosRankSum=-1.904;VQSLOD=3.3795;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:86.42:0,86,496	1/1:0,1:1:3:26,3,0	0/0:55,0:19:36.39:0,36,314	0/0:37,0:12:10.84:0,11,110	1/1:4,18:22:33.10:374,33,0	0/0:16,0:16:34.22:0,34,424	0/0:16,0:16:45.12:0,45,498	1/1:4,25:29:74.86:628,75,0	0/0:10,0:10:27.06:0,27,289	0/0:18,0:18:51.14:0,51,559	0/0:21,0:21:57.15:0,57,629	0/0:27,1:28:43.03:0,43,669	0/0:12,1:13:22.64:0,23,322	0/0:6,0:6:12.02:0,12,124	1/1:5,18:23:35.88:302,36,0	0/0:12,0:12:2.62:0,3,106	1/1:6,23:29:35.57:295,36,0	1/1:1,19:20:38.83:326,39,0	0/1:6,10:16:6.10:160,0,6	1/1:2,11:13:28.49:278,28,0	1/1:2,6:8:8.90:68,9,0	0/0:10,0:10:30.08:0,30,331	0/0:19,0:19:39.39:0,39,522	0/0:14,0:14:21.87:0,22,382	1/1:8,5:13:29.46:226,29,0	1/1:14,9:23:58.23:453,58,0	1/1:4,8:12:29.14:223,29,0	1/1:11,19:30:47.60:519,48,0
chr10	96355477	.	TA	T	2655.76	PASS	AB=0.964;AC=23;AF=0.411;AN=56;BaseQRankSum=3.754;DP=570;FS=1.684;HRun=1;HaplotypeScore=105.9086;InbreedingCoeff=0.9004;MQ=62.60;MQ0=9;MQRankSum=-4.413;QD=12.41;ReadPosRankSum=-5.563;VQSLOD=0.2838;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:96.97:0,97,535	1/1:2,0:2:3.85:22,4,0	0/0:51,1:19:17.21:0,17,282	0/0:42,0:10:10.86:0,11,68	1/1:21,3:24:51.38:383,51,0	0/0:13,0:13:17.71:0,18,115	0/0:20,0:20:36.92:0,37,179	0/0:24,0:24:72.18:0,72,819	0/0:16,0:16:30.95:0,31,148	0/0:19,0:19:39.45:0,39,175	0/1:25,1:27:5.77:6,0,124	0/0:23,0:23:41.95:0,42,227	0/0:13,0:13:14.89:0,15,118	0/0:9,0:9:13.10:0,13,65	1/1:28,2:30:56.32:405,56,0	0/0:11,0:11:28.80:0,29,164	1/1:24,1:25:31.92:176,32,0	1/1:18,3:21:35.72:293,36,0	1/1:11,3:13:32.24:263,32,0	1/1:17,1:18:42.70:306,43,0	1/1:5,2:7:11.92:125,12,0	0/0:11,0:11:27.75:0,28,127	0/0:24,0:24:40.15:0,40,231	0/0:16,0:16:25.30:0,25,150	1/1:9,2:11:25.71:204,26,0	1/1:20,2:22:57.90:425,58,0	1/1:10,3:13:33.66:267,34,0	0/0:21,0:21:53.90:0,54,589
chr10	96355478	.	A	AT	1084.50	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=-4.926;DP=577;FS=11.223;HRun=9;HaplotypeScore=114.6843;InbreedingCoeff=0.5094;MQ=62.38;MQ0=10;MQRankSum=0.662;QD=7.64;ReadPosRankSum=-0.354;VQSLOD=0.7375;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,32:40:78.21:863,78,0	0/1:2,0:2:0:0,0,0	0/0:53,0:20:17.65:0,18,185	0/1:41,0:10:0.02:42,0,0	0/1:24,0:24:11.98:12,0,35	0/0:13,0:13:29.99:0,30,259	0/0:20,0:20:50.94:0,51,432	0/0:25,0:25:48.76:0,49,501	0/0:16,0:16:38.87:0,39,335	0/0:20,0:20:44.91:0,45,380	0/0:27,0:27:22.73:0,23,399	0/0:23,0:23:50.93:0,51,434	0/0:14,0:14:29.94:0,30,253	0/0:10,0:10:26.89:0,27,218	0/0:30,0:30:11.81:0,12,120	1/1:1,10:11:27.03:279,27,0	0/0:25,0:25:23.09:0,23,119	0/0:20,0:20:28.05:0,28,137	0/0:14,0:13:4.16:0,4,11	0/0:18,0:18:23.53:0,24,132	0/0:7,0:7:1.49:0,1,5	0/0:11,0:11:29.99:0,30,260	0/0:24,0:24:62.92:0,63,533	0/0:17,0:17:38.96:0,39,337	0/0:11,0:11:5.56:0,6,26	0/1:22,0:22:26.39:26,0,36	0/0:14,0:14:1.91:0,2,38	0/0:20,0:21:32.02:0,32,266
chr10	96356019	.	C	CT	2510.16	PASS	AB=0.850;AC=27;AF=0.482;AN=56;BaseQRankSum=0.688;DP=563;FS=0.406;HRun=13;HaplotypeScore=74.7634;InbreedingCoeff=0.4611;MQ=75.05;MQ0=2;MQRankSum=0.214;QD=7.52;ReadPosRankSum=-1.623;VQSLOD=2.3285;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:34,3:39:21.55:22,0,306	0/0:5,0:5:11.86:0,12,82	0/0:22,0:17:13.90:0,14,116	0/0:15,0:11:9.77:0,10,61	0/0:9,0:10:22.74:0,23,146	0/1:11,17:31:0.53:202,0,1	1/1:3,14:17:6.92:203,7,0	1/1:12,11:25:22.85:265,23,0	1/1:7,16:22:30.76:267,31,0	1/1:6,16:23:21.88:366,22,0	1/1:5,10:16:9.10:188,9,0	1/1:12,8:20:39.40:303,39,0	1/1:1,10:10:15.02:139,15,0	1/1:12,5:18:7.51:198,8,0	0/0:27,0:30:71.39:0,71,469	0/0:33,1:36:34.99:0,35,364	0/0:22,0:23:59.48:0,59,411	0/1:19,1:21:9.31:9,0,193	0/0:22,1:25:1.43:0,1,234	0/1:18,1:19:24.80:25,0,117	0/0:21,0:21:35.20:0,35,245	0/1:5,8:13:20.14:118,0,20	1/1:4,10:15:14.65:162,15,0	1/1:7,2:21:34.41:200,34,0	0/0:14,0:16:12.07:0,12,193	0/1:16,3:18:23.39:23,0,141	0/0:23,0:25:36.27:0,36,236	0/1:2,0:2:14.57:20,0,15
chr10	96357449	.	CCTT	C	12795.16	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=1.306;DP=544;FS=5.666;HRun=0;HaplotypeScore=90.6405;InbreedingCoeff=0.9991;MQ=73.23;MQ0=0;MQRankSum=-4.542;QD=44.43;ReadPosRankSum=3.276;VQSLOD=6.7549;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,35:36:99:1653,99,0	1/1:0,13:13:39.13:665,39,0	0/0:18,0:18:48.16:0,48,1080	0/0:18,0:18:41.89:0,42,798	1/1:0,27:27:78.26:1263,78,0	0/0:18,0:18:54.19:0,54,1220	0/0:27,0:27:81.25:0,81,1761	1/1:0,19:19:57.19:951,57,0	0/0:24,0:24:72.25:0,72,1658	0/0:19,0:19:57.20:0,57,1290	0/0:24,0:24:69.19:0,69,1495	0/0:20,0:20:57.20:0,57,1314	0/0:12,0:12:36.12:0,36,829	0/0:21,0:21:60.21:0,60,1379	1/1:1,27:28:78.27:1330,78,0	1/1:1,11:12:27.09:460,27,0	1/1:1,23:24:57.20:972,57,0	1/1:0,21:21:51.17:870,51,0	1/1:0,15:15:45.15:747,45,0	1/1:1,17:18:45.15:767,45,0	1/1:1,14:15:33.11:563,33,0	0/0:19,0:19:54.19:0,54,1244	0/0:12,0:12:33.10:0,33,669	0/0:24,0:24:69.24:0,69,1545	1/1:1,11:12:30.10:512,30,0	1/1:0,16:16:48.14:764,48,0	1/1:0,19:19:54.18:920,54,0	1/1:1,12:13:21.07:358,21,0
chr10	96357654	.	TC	T	5030.36	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=-3.065;DP=358;FS=3.368;HRun=11;HaplotypeScore=52.1544;InbreedingCoeff=0.6618;MQ=76.94;MQ0=0;MQRankSum=-4.757;QD=15.20;ReadPosRankSum=3.952;VQSLOD=5.4197;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,1:8:5.94:45,6,0	1/1:2,1:3:2.99:25,3,0	0/0:16,0:15:18.10:0,18,190	0/0:10,0:9:12.47:0,12,123	1/1:1,5:8:11.02:80,11,0	1/1:4,13:17:32.96:271,33,0	1/1:5,16:21:38.94:320,39,0	1/1:12,0:24:8.96:33,9,0	1/1:2,11:13:32.96:271,33,0	1/1:0,6:6:17.98:148,18,0	1/1:1,3:4:8.99:73,9,0	1/1:3,14:17:41.91:339,42,0	1/1:0,5:5:14.98:123,15,0	1/1:1,13:14:35.96:295,36,0	1/1:3,6:9:20.96:172,21,0	1/1:1,13:14:32.21:269,32,0	1/1:5,25:31:73.92:597,74,0	1/1:2,13:15:31.99:252,32,0	1/1:10,7:18:23.46:179,23,0	./.	1/1:11,1:12:18.68:132,19,0	1/1:2,3:5:11.99:98,12,0	1/1:3,4:7:17.98:147,18,0	1/1:3,32:35:77.91:640,78,0	1/1:5,7:12:6.34:175,6,0	1/1:2,4:6:8.97:74,9,0	1/1:13,7:20:4.22:238,4,0	1/1:0,0:6:12.22:35,12,0
chr10	96357783	.	GTTTTTTT	G	2742.40	PASS	AB=0.895;AC=21;AF=0.389;AN=54;BaseQRankSum=4.740;DP=437;FS=33.842;HRun=18;HaplotypeScore=129.2133;InbreedingCoeff=0.8680;MQ=64.63;MQ0=15;MQRankSum=-8.228;QD=29.81;ReadPosRankSum=3.832;VQSLOD=-0.1349;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:20:45.15:0,45,1044	0/0:3,0:8:21.07:0,21,533	0/0:79,0:23:52.91:0,53,765	0/0:85,0:22:29.83:0,30,445	0/0:7,0:13:33.10:0,33,709	1/1:6,8:15:26.64:506,27,0	1/1:1,6:7:17.98:347,18,0	0/0:15,0:19:36.12:0,36,846	1/1:2,5:6:12:230,12,0	1/1:5,4:8:11.86:232,12,0	1/1:3,10:13:29.99:578,30,0	1/1:2,2:2:6.02:116,6,0	./.	1/1:0,3:3:9.03:174,9,0	0/0:5,0:7:15.05:0,15,431	0/0:5,0:7:18.06:0,18,416	0/0:14,0:18:42.14:0,42,1253	0/1:15,0:16:1.94:2,0,1003	0/0:19,0:24:56.69:0,57,1442	0/0:3,0:8:21.07:0,21,531	0/0:4,0:5:9.03:0,9,221	1/1:3,4:10:24:413,24,0	1/1:0,5:5:15.05:289,15,0	1/1:0,2:2:3.01:58,3,0	0/0:8,0:13:30.10:0,30,746	0/0:10,0:14:33.11:0,33,822	0/0:9,0:13:30.10:0,30,750	0/0:6,0:6:12.04:0,12,322
chr10	96357833	.	TG	T	1350.16	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=10.266;DP=349;FS=7.196;HRun=1;HaplotypeScore=113.2378;InbreedingCoeff=0.8800;MQ=68.11;MQ0=4;MQRankSum=-7.560;QD=15.52;ReadPosRankSum=-2.133;VQSLOD=2.6434;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:0.43:0,0,262	0/0:7,0:7:21.04:0,21,236	0/0:32,0:21:47.14:0,47,593	0/0:26,1:20:23.02:0,23,399	0/0:21,0:21:10.65:0,11,552	1/1:9,4:13:32.74:238,33,0	1/1:1,2:3:8.62:87,9,0	0/0:19,0:19:48.30:0,48,578	1/1:5,2:6:13.74:87,14,0	1/1:7,5:12:34.04:303,34,0	1/1:14,4:18:46.74:254,47,0	1/1:6,0:6:12.10:49,12,0	1/1:2,1:3:6.08:43,6,0	1/1:1,3:4:11.71:120,12,0	0/0:8,0:8:24.07:0,24,287	0/0:19,0:19:57.16:0,57,682	0/0:18,0:18:46.01:0,46,581	0/0:13,0:13:36.10:0,36,424	0/0:21,0:20:36.26:0,36,718	0/0:8,0:8:18.73:0,19,276	0/0:6,0:6:9.03:0,9,109	1/1:7,3:10:25.43:201,25,0	1/1:8,1:9:22.31:137,22,0	1/1:1,1:2:5.60:43,6,0	0/0:11,0:11:10.42:0,10,276	0/0:18,0:18:12.39:0,12,497	0/0:19,0:19:21.95:0,22,486	0/0:4,0:4:11.90:0,12,122
chr10	96357837	.	T	TTTG	11200.64	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.625;DP=351;FS=0.000;HRun=0;HaplotypeScore=95.5349;InbreedingCoeff=0.7319;MQ=62.84;MQ0=4;MQRankSum=-1.582;QD=37.09;ReadPosRankSum=3.753;VQSLOD=5.3500;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,8:13:24.08:476,24,0	1/1:1,5:6:15.05:305,15,0	0/0:26,0:18:18.01:0,18,208	0/0:21,0:17:19.32:0,19,220	1/1:4,19:23:57.18:1055,57,0	1/1:7,0:13:20.74:271,21,0	1/1:2,0:3:3.01:43,3,0	1/1:8,11:21:37.47:691,37,0	1/1:4,0:6:14.96:189,15,0	1/1:8,0:12:20.99:257,21,0	1/1:8,0:18:35.78:470,36,0	1/1:3,0:6:16.29:204,16,0	1/1:3,0:3:6.83:48,7,0	1/1:4,0:4:5.69:55,6,0	1/1:0,8:8:24.08:489,24,0	1/1:3,16:19:48.16:977,48,0	1/1:7,10:18:38.91:709,39,0	1/1:4,11:15:32.98:625,33,0	1/1:17,5:22:20.90:386,21,0	1/1:7,2:9:19.11:263,19,0	1/1:3,4:7:9.03:183,9,0	1/1:4,0:10:21.05:270,21,0	1/1:4,0:9:26.65:315,27,0	1/1:1,0:2:5.69:54,6,0	1/1:4,8:12:30.02:550,30,0	1/1:0,18:18:54.18:1072,54,0	1/1:6,12:19:50.84:1001,51,0	1/1:1,3:4:12.04:240,12,0
chr10	96357862	.	TA	T	652.79	PASS	AB=0.943;AC=22;AF=0.393;AN=56;BaseQRankSum=9.810;DP=391;FS=13.475;HRun=1;HaplotypeScore=107.1187;InbreedingCoeff=0.6985;MQ=68.52;MQ0=5;MQRankSum=-8.056;QD=5.53;ReadPosRankSum=0.627;VQSLOD=-0.7488;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:45.13:0,45,590	0/0:6,0:6:17.98:0,18,205	0/0:34,3:16:37.98:0,38,421	0/1:39,4:23:22.82:23,0,177	0/0:26,0:26:75.25:0,75,1014	1/1:10,0:10:10.38:88,10,0	1/1:4,0:4:9.67:40,10,0	0/0:29,0:29:87.14:0,87,1077	1/1:7,0:6:16.97:94,17,0	0/1:8,0:8:3.10:32,0,3	1/1:12,2:14:17.32:163,17,0	1/1:6,1:7:19.56:109,20,0	1/1:2,1:3:8.44:56,8,0	1/1:1,0:1:3:25,3,0	0/0:14,0:13:39.10:0,39,511	0/0:19,0:19:45.81:0,46,689	0/0:19,0:19:46.39:0,46,701	0/0:19,0:19:33.13:0,33,620	0/0:17,0:17:50.43:0,50,573	0/0:13,0:13:27.24:0,27,423	0/0:5,0:5:15.05:0,15,204	0/1:5,1:6:0.25:47,0,0	1/1:7,2:9:22.50:156,22,0	1/1:1,0:1:2.74:12,3,0	0/0:13,0:13:28.85:0,29,464	0/0:22,0:22:66.19:0,66,867	0/0:18,0:18:50.74:0,51,616	0/1:4,0:4:4.41:4,0,107
chr10	96357863	.	AT	A	1500.28	PASS	AB=0.979;AC=23;AF=0.411;AN=56;BaseQRankSum=6.618;DP=401;FS=4.778;HRun=8;HaplotypeScore=106.4220;InbreedingCoeff=0.8434;MQ=69.05;MQ0=6;MQRankSum=-8.064;QD=12.61;ReadPosRankSum=0.268;VQSLOD=3.0685;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.13:0,42,507	0/0:6,0:6:15.04:0,15,178	0/0:39,0:16:23.62:0,24,305	0/1:45,1:23:10.54:11,0,116	0/0:28,0:28:81.22:0,81,955	1/1:3,8:11:27.04:260,27,0	1/1:0,4:4:12.02:116,12,0	0/0:29,0:29:72.22:0,72,869	1/1:2,5:6:15.91:147,16,0	1/1:1,7:8:21.03:203,21,0	1/1:4,10:14:38.57:342,39,0	1/1:2,6:8:23.39:204,23,0	1/1:2,1:3:6.48:58,6,0	1/1:0,1:1:3:29,3,0	0/0:14,0:13:39.09:0,39,456	0/0:18,1:19:25.21:0,25,587	0/0:20,0:20:54.17:0,54,652	0/0:18,0:18:44.64:0,45,542	0/0:17,0:17:39.12:0,39,471	0/0:13,0:13:35.70:0,36,409	0/0:5,0:5:15.05:0,15,181	1/1:2,4:6:12:115,12,0	1/1:4,5:9:22.57:199,23,0	1/1:0,1:1:3:29,3,0	0/0:13,0:13:33.57:0,34,399	0/0:22,0:22:63.19:0,63,761	0/0:18,0:18:44.87:0,45,541	0/0:4,0:4:9.91:0,10,111
chr10	96357900	.	CTT	C	2591.20	PASS	AB=0.713;AC=44;AF=0.815;AN=54;BaseQRankSum=-1.969;DP=394;FS=5.839;HRun=14;HaplotypeScore=72.4746;InbreedingCoeff=0.5635;MQ=54.67;MQ0=32;MQRankSum=1.675;QD=9.67;ReadPosRankSum=4.719;VQSLOD=1.9412;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,15:21:35.70:316,36,0	1/1:4,2:5:8.98:78,9,0	0/0:32,0:4:3.01:0,3,32	0/0:67,0:20:17.81:0,18,96	1/1:13,13:25:29.68:277,30,0	1/1:4,0:13:21.69:92,22,0	0/1:3,0:4:0.71:7,0,1	0/0:15,0:21:24.02:0,24,211	1/1:2,0:4:5.45:24,5,0	1/1:2,0:7:11.83:49,12,0	1/1:8,0:14:0.80:37,1,0	1/1:3,0:11:10.84:47,11,0	1/1:1,0:2:2.74:12,3,0	1/1:2,0:6:8.21:36,8,0	1/1:4,7:12:17.55:188,18,0	1/1:9,6:16:26.66:219,27,0	0/1:8,7:18:0.54:139,0,1	1/1:5,6:14:17.60:215,18,0	1/1:6,7:14:26.70:226,27,0	1/1:9,7:16:26.62:227,27,0	1/1:3,1:3:5.75:40,6,0	1/1:1,0:5:10.96:47,11,0	1/1:4,1:7:5.70:40,6,0	./.	1/1:5,5:11:17.63:150,18,0	1/1:12,4:15:20.66:175,21,0	1/1:6,4:10:11.68:95,12,0	0/0:2,0:2:2.98:0,3,21
chr10	96357913	.	TTC	T	153.80	PASS	AB=1.000;AC=14;AF=0.259;AN=54;BaseQRankSum=0.151;DP=326;FS=4.229;HRun=0;HaplotypeScore=61.0699;InbreedingCoeff=-0.0192;MQ=47.94;MQ0=29;MQRankSum=4.414;QD=1.07;ReadPosRankSum=4.914;VQSLOD=0.9645;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,1:20:1.07:81,1,0	1/1:5,0:4:3.92:14,4,0	0/0:17,0:2:3.01:0,3,42	0/0:38,2:12:2.48:0,2,81	0/1:21,0:20:15.14:15,0,40	0/0:10,0:10:17.26:0,17,71	0/0:7,0:7:8.29:0,8,48	0/0:19,0:15:32.80:0,33,287	0/0:5,0:4:8.38:0,8,43	0/0:8,0:8:15.28:0,15,72	0/0:11,0:11:14.44:0,14,78	0/0:10,0:8:6.34:0,6,19	0/0:3,0:2:1.25:0,1,3	0/0:7,0:5:4.99:0,5,16	0/1:13,0:11:19.83:20,0,48	0/1:14,0:14:5.52:6,0,55	0/0:19,0:17:2.63:0,3,91	0/1:14,0:14:14.24:27,0,14	1/1:13,0:10:4.76:42,5,0	0/1:12,0:12:21.58:24,0,22	0/0:4,1:3:1.06:0,1,7	0/0:5,0:5:9.23:0,9,38	0/0:10,0:9:1.48:0,1,43	./.	0/1:8,0:8:12.42:12,0,30	0/1:15,0:13:33.05:33,0,102	0/1:8,0:7:13.40:19,0,13	0/0:6,0:5:11.86:0,12,95
chr10	96357992	.	CT	C	358.30	PASS	AB=0.947;AC=5;AF=0.089;AN=56;BaseQRankSum=1.857;DP=365;FS=1.614;HRun=10;HaplotypeScore=47.5194;InbreedingCoeff=0.5437;MQ=78.31;MQ0=16;MQRankSum=1.298;QD=7.03;ReadPosRankSum=-1.828;VQSLOD=0.7423;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:43.06:0,43,666	0/0:4,0:4:9.02:0,9,99	0/0:42,0:23:59.15:0,59,547	0/0:28,0:15:13.98:0,14,190	0/0:10,0:10:24.05:0,24,256	0/0:9,0:8:24.06:0,24,258	0/0:14,0:13:10.39:0,10,308	1/1:12,19:27:48.83:415,49,0	0/0:16,1:16:19.05:0,19,417	0/0:11,0:11:27.07:0,27,291	0/0:4,0:3:9.02:0,9,99	0/0:18,0:18:48.07:0,48,500	0/0:4,0:4:9.02:0,9,99	0/0:10,0:9:24.48:0,24,242	0/0:12,0:11:30.01:0,30,299	0/0:7,0:7:21:0,21,208	0/0:23,0:23:57.15:0,57,626	0/0:10,1:11:0.97:0,1,208	0/1:17,1:16:7.47:7,0,329	0/0:3,0:3:9.02:0,9,99	0/0:11,0:11:24.06:0,24,265	0/0:1,0:1:3.01:0,3,33	0/0:8,0:8:24.05:0,24,252	0/0:8,0:8:24.05:0,24,255	0/0:9,0:9:27.07:0,27,296	0/0:14,0:14:15.69:0,16,340	0/0:13,0:13:33.07:0,33,355	1/1:0,2:2:6:52,6,0
chr10	96358901	.	T	TA	2255.08	PASS	AB=0.818;AC=38;AF=0.704;AN=54;BaseQRankSum=1.968;DP=255;FS=18.761;HRun=11;HaplotypeScore=51.7566;InbreedingCoeff=0.7203;MQ=77.15;MQ0=1;MQRankSum=1.004;QD=14.46;ReadPosRankSum=-2.958;VQSLOD=1.5150;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:20:43.67:0,44,320	1/1:0,4:4:11.98:111,12,0	0/1:17,0:12:6.16:6,0,26	0/0:15,0:10:2.80:0,3,23	1/1:3,11:14:30.02:294,30,0	1/1:7,0:10:20.63:131,21,0	1/1:4,0:10:17.35:96,17,0	0/0:10,0:10:20.92:0,21,162	./.	1/1:6,0:8:17.73:113,18,0	1/1:5,0:8:11.72:70,12,0	1/1:1,0:5:11.68:68,12,0	1/1:1,0:4:8.85:57,9,0	1/1:1,0:6:14.77:102,15,0	0/1:3,4:7:8.18:107,0,8	0/0:7,0:8:19.97:0,20,145	0/0:20,0:20:44.72:0,45,340	0/0:12,0:12:26.89:0,27,209	1/1:2,8:10:24.02:235,24,0	1/1:1,9:10:27.02:264,27,0	1/1:0,2:2:6:55,6,0	1/1:0,0:4:5.87:35,6,0	1/1:3,1:10:23.71:172,24,0	1/1:2,0:3:3.01:30,3,0	1/1:1,8:9:18.04:183,18,0	1/1:2,4:6:11.98:105,12,0	1/1:1,7:8:21.04:213,21,0	0/0:11,0:11:26.87:0,27,209
chr10	96358929	.	T	TA	695.87	PASS	AB=0.667;AC=25;AF=0.446;AN=56;BaseQRankSum=3.942;DP=193;FS=5.279;HRun=10;HaplotypeScore=45.7812;InbreedingCoeff=0.7153;MQ=79.70;MQ0=1;MQRankSum=-5.708;QD=9.94;ReadPosRankSum=-0.561;VQSLOD=1.8182;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:23.94:0,24,197	0/0:5,0:5:14.96:0,15,120	0/0:12,0:9:17.54:0,18,136	0/0:18,0:12:17.38:0,17,124	0/0:11,0:11:26.87:0,27,213	1/1:8,0:8:19.89:98,20,0	1/1:9,0:9:19.92:99,20,0	1/1:2,8:10:27.01:262,27,0	1/1:1,0:1:2.84:14,3,0	1/1:5,0:6:11.56:71,12,0	1/1:7,0:7:14.20:70,14,0	1/1:3,0:3:2.84:14,3,0	1/1:3,0:3:5.59:26,6,0	1/1:1,0:1:2.84:14,3,0	0/0:5,0:5:14.98:0,15,123	0/0:6,0:6:17.98:0,18,148	0/0:14,1:15:3.97:0,4,239	0/0:6,0:6:8.99:0,9,74	0/0:9,0:9:23.95:0,24,197	0/0:8,0:8:23.97:0,24,197	0/0:2,0:2:2.99:0,3,25	1/1:1,0:1:2.84:14,3,0	1/1:8,0:8:8.43:40,8,0	1/1:3,0:3:5.68:28,6,0	0/0:5,0:6:11.02:0,11,80	0/0:3,0:3:8.99:0,9,74	0/0:6,0:6:14.98:0,15,123	0/1:5,5:10:6.59:142,0,7
chr10	96358937	.	A	AAAAG	2650.46	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=7.369;DP=179;FS=2.393;HRun=0;HaplotypeScore=48.9460;InbreedingCoeff=0.8194;MQ=85.58;MQ0=0;MQRankSum=-8.807;QD=57.62;ReadPosRankSum=0.999;VQSLOD=4.2890;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:27.05:0,27,433	0/0:5,0:5:15.05:0,15,247	0/0:13,0:11:23.64:0,24,313	0/0:16,0:11:18.90:0,19,232	0/0:9,0:9:27.09:0,27,454	1/1:0,7:7:21.07:531,21,0	1/1:1,8:9:24.08:601,24,0	0/0:11,0:11:30.16:0,30,169	1/1:0,1:1:3.01:76,3,0	1/1:5,1:6:17.92:326,18,0	1/1:2,5:7:21.07:510,21,0	1/1:2,1:3:5.98:96,6,0	1/1:1,1:3:9.03:151,9,0	1/1:0,1:1:3.01:76,3,0	0/0:5,0:5:15.05:0,15,255	0/0:6,0:6:18.06:0,18,302	0/0:12,0:12:35.91:0,36,570	0/0:3,0:3:9.03:0,9,153	0/0:9,0:9:24.06:0,24,382	0/0:8,0:8:24.08:0,24,404	0/0:2,0:2:3:0,3,51	1/1:0,1:1:3.01:76,3,0	1/1:3,2:6:12.04:257,12,0	1/1:0,2:2:6.02:152,6,0	0/0:6,0:6:12.04:0,12,185	0/0:3,0:3:9.03:0,9,153	0/0:5,0:5:15.05:0,15,255	0/0:8,0:8:16.97:0,17,118
chr10	96360414	.	ATGTG	A	1047.29	PASS	AB=0.810;AC=33;AF=0.868;AN=38;BaseQRankSum=2.310;DP=663;FS=0.000;HRun=0;HaplotypeScore=112.5715;InbreedingCoeff=0.1754;MQ=67.50;MQ0=13;MQRankSum=0.959;QD=2.63;ReadPosRankSum=2.239;VQSLOD=1.9491;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:9,0:11:9.01:84,9,0	./.	./.	1/1:16,0:18:2.97:20,3,0	./.	1/1:22,5:27:3.07:46,3,0	./.	0/0:18,0:18:0:0,0,0	1/1:23,2:25:4.31:85,4,0	./.	1/1:19,2:21:9.50:138,10,0	1/1:13,0:17:3:26,3,0	1/1:18,2:20:3.01:46,3,0	1/1:28,2:30:9.49:120,9,0	1/1:21,0:33:14.96:139,15,0	1/1:19,0:27:2.30:9,2,0	1/1:24,0:33:12.01:112,12,0	./.	1/1:18,0:21:3:28,3,0	./.	1/1:24,4:27:2.88:46,3,0	0/1:13,4:17:0:0,0,0	1/1:25,9:34:6.02:91,6,0	1/1:10,1:14:6.01:74,6,0	0/0:17,0:17:0.47:0,0,1	1/1:18,0:22:5.89:59,6,0	./.
chr10	96361538	.	CAATAAAATAA	C	6663.78	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-4.365;DP=456;FS=7.552;HRun=0;HaplotypeScore=128.5931;InbreedingCoeff=0.3308;MQ=61.89;MQ0=10;MQRankSum=0.094;QD=17.26;ReadPosRankSum=6.714;VQSLOD=2.3325;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,24:37:30.10:903,30,0	1/1:3,4:6:3.01:90,3,0	0/0:15,0:7:3.48:0,3,41	0/0:36,0:20:25.39:0,25,255	1/1:7,18:25:17.93:331,18,0	0/1:9,0:8:11.39:21,0,11	1/1:8,0:8:2.88:15,3,0	1/1:36,0:32:21.01:282,21,0	1/1:13,0:13:10.06:52,10,0	1/1:16,0:14:8.69:48,9,0	0/1:11,0:11:19.59:66,0,20	0/0:10,0:10:0.47:0,0,1	1/1:5,0:5:8.80:53,9,0	0/1:9,0:9:13.85:17,0,14	1/1:8,17:25:27.09:813,27,0	1/1:10,15:24:24.08:723,24,0	1/1:5,14:17:12:291,12,0	1/1:11,8:19:10.23:203,10,0	1/1:10,6:12:14.99:191,15,0	1/1:6,10:16:20.98:492,21,0	1/1:8,0:8:2.95:20,3,0	0/0:9,0:9:2.97:0,3,20	1/1:4,0:4:2.88:15,3,0	1/1:3,0:3:1.67:17,2,0	1/1:5,10:15:15.01:381,15,0	1/1:11,17:28:42.07:1020,42,0	1/1:11,9:20:11.62:361,12,0	1/1:2,9:11:12:258,12,0
chr10	96361561	.	TAAAATAA	T	4312.03	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=7.858;DP=403;FS=22.416;HRun=0;HaplotypeScore=103.0539;InbreedingCoeff=-0.0987;MQ=60.69;MQ0=8;MQRankSum=-6.685;QD=14.09;ReadPosRankSum=10.649;VQSLOD=0.7668;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:31:99:372,0,243	0/1:9,0:8:18.36:18,0,262	0/0:22,0:12:29.76:0,30,396	0/0:37,0:19:37.62:0,38,398	0/1:25,0:25:72.92:73,0,587	1/1:1,7:7:9.03:202,9,0	1/1:1,7:8:3.01:79,3,0	0/0:29,0:29:16.49:0,16,620	1/1:5,2:7:21.07:405,21,0	1/1:1,7:7:12.28:292,12,0	1/1:2,12:13:27.09:500,27,0	1/1:1,7:8:3.01:63,3,0	1/1:4,1:5:9.88:206,10,0	1/1:1,5:6:6.02:123,6,0	0/1:20,0:20:99:339,0,184	0/1:17,0:16:99:306,0,102	0/1:17,0:16:99:109,0,113	0/1:17,0:17:77.19:77,0,169	0/1:16,0:14:8.43:8,0,384	0/1:15,0:15:99:172,0,322	0/0:7,0:7:11.44:0,11,150	1/1:1,3:3:3.01:44,3,0	1/1:0,2:2:6.02:114,6,0	1/1:4,0:4:4.36:78,4,0	0/1:15,0:15:99:139,0,236	0/1:24,0:24:99:375,0,201	0/1:13,0:13:99:145,0,155	0/1:11,0:11:73.68:74,0,138
chr10	96362318	.	TC	T	3737.07	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=6.991;DP=740;FS=0.417;HRun=2;HaplotypeScore=69.4264;InbreedingCoeff=0.9505;MQ=51.02;MQ0=75;MQRankSum=3.901;QD=30.14;ReadPosRankSum=4.074;VQSLOD=3.2030;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:32:78.25:1012,78,0	0/0:16,0:15:42:0,42,627	0/0:18,0:1:3:0,3,26	./.	0/0:23,0:23:51.15:0,51,721	0/0:20,0:15:36.10:0,36,502	0/0:22,0:20:33.10:0,33,469	0/0:29,0:7:21.05:0,21,293	0/0:20,0:20:57.19:0,57,853	0/0:29,0:26:75.14:0,75,1042	0/0:24,0:23:57.13:0,57,775	0/0:35,0:34:78.20:0,78,1105	0/0:23,0:23:69.16:0,69,965	0/0:33,0:31:78.22:0,78,1142	0/0:30,0:29:72.03:0,72,1041	1/1:0,37:36:96.31:1246,96,0	1/1:0,25:25:60.20:779,60,0	1/1:1,27:28:54.15:700,54,0	0/0:27,0:18:51.15:0,51,737	0/0:22,0:22:66.18:0,66,958	0/0:30,0:29:75.25:0,75,1122	0/0:29,0:26:51.14:0,51,738	0/0:20,0:19:48.16:0,48,715	0/0:40,0:40:87.27:0,87,1265	0/0:23,0:23:51.15:0,51,725	0/0:23,0:22:63.16:0,63,895	0/0:39,0:39:87.21:0,87,1292	0/0:7,0:7:21.06:0,21,295
chr10	96363222	.	GAAAAAAAGAACA	G	405.19	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=-1.646;DP=479;FS=24.893;HRun=0;HaplotypeScore=147.2634;InbreedingCoeff=0.7957;MQ=41.94;MQ0=43;MQRankSum=-0.682;QD=11.58;ReadPosRankSum=2.383;VQSLOD=1.1354;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:33:59.73:0,60,882	0/0:9,0:9:24.05:0,24,529	./.	0/0:4,0:1:3.01:0,3,123	0/0:11,0:9:11.98:0,12,299	0/0:17,0:14:33.10:0,33,967	0/0:25,0:20:42.29:0,42,1465	0/0:23,0:20:47.95:0,48,1438	0/0:17,0:16:38.92:0,39,1093	0/0:22,0:21:47.95:0,48,1470	0/0:19,0:17:39.08:0,39,1067	0/0:23,0:21:44.78:0,45,1238	0/0:19,0:16:32.88:0,33,850	0/0:15,0:13:32.99:0,33,1022	0/0:26,0:25:42.25:0,42,794	0/0:23,0:23:41.95:0,42,586	1/1:16,0:14:30.02:409,30,0	1/1:10,9:12:3.01:105,3,0	0/0:12,0:10:30.07:0,30,627	0/0:18,0:16:29.87:0,30,652	0/0:18,0:15:26.89:0,27,595	0/0:13,0:12:26.95:0,27,662	0/0:18,0:15:26.86:0,27,736	0/0:10,0:10:26.97:0,27,817	0/0:14,0:13:33.09:0,33,576	0/0:19,0:18:46.69:0,47,995	0/0:17,0:14:30.37:0,30,624	0/0:9,0:6:15.05:0,15,309
chr10	96363227	.	AAAGAAC	A	762.44	PASS	AB=0.986;AC=20;AF=0.370;AN=54;BaseQRankSum=1.813;DP=492;FS=20.984;HRun=0;HaplotypeScore=100.5822;InbreedingCoeff=-0.3230;MQ=41.23;MQ0=39;MQRankSum=-1.974;QD=2.21;ReadPosRankSum=-3.420;VQSLOD=-0.6117;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:32:20.14:20,0,343	0/1:11,0:11:21.36:21,0,238	./.	0/0:4,0:1:3.01:0,3,54	0/1:12,0:10:16.46:16,0,89	0/0:16,0:13:5.89:0,6,455	0/0:22,0:17:44.10:0,44,861	0/0:21,0:21:40.10:0,40,923	0/0:17,0:16:9.07:0,9,576	0/1:24,0:23:13.78:14,0,923	0/1:19,0:17:25.49:25,0,558	0/0:21,0:19:44.23:0,44,626	0/1:17,0:14:6.41:6,0,352	0/1:14,0:13:74.22:74,0,481	0/1:27,0:26:32:32,0,274	0/1:22,0:22:23.21:23,0,230	1/1:14,0:12:30.02:409,30,0	1/1:18,0:11:3.01:58,3,0	0/1:13,5:17:66.33:66,0,341	0/0:18,0:16:2.01:0,2,312	0/1:19,0:16:6.09:6,0,249	0/1:13,0:13:18.24:18,0,400	0/1:20,0:17:59.54:60,0,447	0/0:11,0:10:26.95:0,27,465	0/0:14,0:13:20.55:0,21,387	0/1:22,0:21:49.39:49,0,591	0/1:24,0:21:6.46:6,0,345	0/1:10,0:7:12.35:12,0,122
chr10	96364119	.	TGCGC	T	1888.66	PASS	AB=0.810;AC=20;AF=0.455;AN=44;BaseQRankSum=4.557;DP=378;FS=2.339;HRun=0;HaplotypeScore=86.5635;InbreedingCoeff=0.5807;MQ=68.98;MQ0=2;MQRankSum=-5.772;QD=12.03;ReadPosRankSum=-0.901;VQSLOD=3.0259;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:17.60:0,18,1068	1/1:2,4:6:3.01:51,3,0	./.	0/0:12,0:7:0:0,0,0	./.	0/0:6,0:15:1.52:0,2,16	0/0:5,0:18:9.47:0,9,92	1/1:4,16:20:47.72:608,48,0	./.	0/0:2,0:11:17.07:0,17,205	./.	./.	0/1:5,0:7:1.78:2,0,104	./.	1/1:2,12:14:2.79:51,3,0	0/0:4,0:4:9.03:0,9,224	0/0:23,0:24:54.77:0,55,1357	0/0:25,0:25:47.61:0,48,902	1/1:7,7:14:20.98:246,21,0	1/1:4,10:14:3.48:52,3,0	1/1:12,24:36:9.03:151,9,0	0/0:1,0:6:0.58:0,1,4	0/0:8,0:18:3.25:0,3,38	0/0:4,0:12:11.96:0,12,145	1/1:2,6:8:3.48:52,3,0	0/1:5,8:13:5.18:382,0,5	1/1:2,14:16:20.92:325,21,0	1/1:8,1:9:11.99:123,12,0
chr10	96364138	.	T	TCG	82.48	PASS	AB=1.000;AC=14;AF=0.269;AN=52;BaseQRankSum=1.591;DP=381;FS=37.594;HRun=0;HaplotypeScore=94.7481;InbreedingCoeff=0.2240;MQ=50.08;MQ0=8;MQRankSum=1.831;QD=0.63;ReadPosRankSum=-0.366;VQSLOD=-0.0365;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:36:22.36:22,0,369	0/0:4,0:4:2.94:0,3,18	./.	0/1:3,0:1:0:0,0,0	./.	0/0:11,0:11:0.55:0,1,2	0/1:16,0:14:3.83:33,0,4	0/0:20,0:20:53.44:0,53,366	1/1:3,0:4:0.47:1,0,0	0/1:12,0:11:1.45:1,0,99	0/0:8,0:8:2.98:0,3,22	0/1:6,0:8:11.31:20,0,11	1/1:5,0:5:8.62:52,9,0	0/0:6,0:6:2.68:0,3,11	0/0:17,0:17:5.74:0,6,45	0/1:9,0:9:5.80:6,0,68	0/0:26,0:26:52.46:0,52,521	0/0:19,4:24:11.40:0,11,294	0/0:16,0:15:35.08:0,35,228	0/0:15,0:15:2.76:0,3,20	0/0:41,0:39:8.06:0,8,64	0/1:10,0:9:0.01:0,0,0	0/1:12,0:12:11.03:31,0,11	1/1:13,0:13:9.57:44,10,0	0/0:11,0:11:9.90:0,10,101	0/0:14,0:13:18.23:0,18,235	0/0:16,0:16:20.53:0,21,127	0/0:3,0:3:8.98:0,9,74
chr10	96364139	.	CGT	C	71.02	PASS	AB=0.982;AC=14;AF=0.292;AN=48;BaseQRankSum=1.935;DP=385;FS=1.487;HRun=0;HaplotypeScore=84.9238;InbreedingCoeff=0.2764;MQ=49.62;MQ0=8;MQRankSum=-0.129;QD=0.48;ReadPosRankSum=-0.146;VQSLOD=1.4291;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:36:3.91:0,4,334	./.	./.	./.	./.	0/0:11,0:11:0:0,0,0	0/0:17,0:14:6.48:0,6,66	0/0:20,0:20:0.89:0,1,2	0/0:4,0:4:3:0,3,26	0/0:12,0:11:9.02:0,9,110	0/0:7,0:8:2.97:0,3,20	0/0:8,0:8:6:0,6,52	0/0:2,0:4:6.28:0,6,36	0/0:6,0:6:2.97:0,3,20	1/1:18,0:18:3.01:32,3,0	0/0:9,0:9:8.98:0,9,86	0/1:26,1:27:33.61:34,0,298	0/0:22,0:24:21.04:0,21,247	1/1:15,0:15:0.17:27,0,0	1/1:14,0:15:0.47:1,0,0	1/1:39,2:39:2.62:18,3,0	0/0:10,0:10:0.65:0,1,4	0/0:13,0:13:3:0,3,26	0/0:14,0:14:9:0,9,78	0/1:11,0:11:10.65:11,0,56	0/0:15,0:14:3.01:0,3,31	1/1:15,1:16:2.99:24,3,0	1/1:1,1:3:5.85:46,6,0
chr10	96364660	.	C	CCT	7599.43	PASS	AB=0.700;AC=40;AF=0.714;AN=56;BaseQRankSum=-1.123;DP=526;FS=1.623;HRun=0;HaplotypeScore=95.6592;InbreedingCoeff=0.4215;MQ=65.38;MQ0=4;MQRankSum=-2.676;QD=18.27;ReadPosRankSum=0.005;VQSLOD=4.8355;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:47.93:0,48,523	1/1:2,0:6:6.47:54,6,0	0/0:32,0:21:16.01:0,16,187	0/1:29,0:21:15.55:16,0,165	1/1:3,2:6:6.01:74,6,0	1/1:4,8:12:24.08:386,24,0	0/1:10,22:32:48.98:762,0,49	1/1:20,1:25:23.85:182,24,0	1/1:2,16:18:45.15:725,45,0	1/1:6,15:23:42.11:629,42,0	1/1:4,6:10:15.05:242,15,0	1/1:3,19:23:48.16:774,48,0	0/1:4,9:13:42.16:357,0,42	0/1:3,8:11:15.29:268,0,15	1/1:15,0:34:59.71:503,60,0	0/0:14,0:14:33.10:0,33,396	0/0:23,0:24:63.01:0,63,729	0/0:14,0:16:41.96:0,42,487	1/1:8,0:14:17.96:151,18,0	1/1:4,1:8:12.01:127,12,0	1/1:14,0:33:26.34:212,26,0	0/1:7,9:16:51.61:221,0,52	0/1:6,2:8:39.38:39,0,64	1/1:5,22:27:29.83:980,30,0	1/1:6,0:16:26.99:237,27,0	1/1:14,1:26:40.02:346,40,0	1/1:2,0:16:32.99:289,33,0	1/1:4,0:8:3:26,3,0
chr10	96365966	.	C	CAAT	13066.80	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-14.991;DP=615;FS=0.665;HRun=0;HaplotypeScore=93.8442;InbreedingCoeff=0.9994;MQ=92.17;MQ0=0;MQRankSum=-7.230;QD=59.13;ReadPosRankSum=0.970;VQSLOD=6.6756;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1112	1/1:0,8:8:24.08:567,24,0	0/0:31,0:31:87.27:0,87,1496	0/0:23,0:23:62.77:0,63,1021	1/1:7,9:17:27.01:584,27,0	0/0:26,0:26:75.23:0,75,1261	0/0:30,0:30:90.31:0,90,1588	1/1:5,26:32:90.30:2000,90,0	0/0:21,0:21:63.22:0,63,1111	0/0:22,0:22:63.21:0,63,1070	0/0:11,0:11:30.10:0,30,528	0/0:19,0:19:54.19:0,54,953	0/0:19,0:19:54.16:0,54,922	0/0:17,0:17:51.16:0,51,872	1/1:0,21:21:54.19:1270,54,0	0/0:26,0:26:75.08:0,75,720	0/0:28,0:28:81.13:0,81,780	0/0:33,0:33:96.10:0,96,909	1/1:1,13:15:42.14:992,42,0	1/1:2,14:17:39.09:871,39,0	1/1:0,24:26:63.22:1467,63,0	0/0:12,0:12:33.11:0,33,582	0/0:13,0:13:39.12:0,39,650	0/0:25,0:25:69.22:0,69,1188	1/1:0,16:16:45.15:1063,45,0	1/1:1,29:30:37.37:1994,37,0	1/1:1,22:24:60.18:1414,60,0	1/1:3,10:15:36.12:844,36,0
chr10	96366775	.	GA	G	1391.15	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=7.184;DP=424;FS=6.328;HRun=8;HaplotypeScore=42.6970;InbreedingCoeff=0.9458;MQ=69.66;MQ0=0;MQRankSum=-0.193;QD=22.81;ReadPosRankSum=1.252;VQSLOD=3.8285;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.24:0,78,942	0/0:7,0:7:15.05:0,15,180	0/0:9,0:6:10.83:0,11,99	./.	0/0:20,0:20:48.14:0,48,568	0/0:20,0:20:51.15:0,51,605	0/0:11,0:11:30.09:0,30,362	0/0:6,0:25:46.06:0,46,228	0/0:9,0:9:27.08:0,27,325	0/0:15,0:15:42.13:0,42,507	0/0:16,0:16:37.67:0,38,437	0/0:12,0:12:33.10:0,33,398	0/0:8,0:8:21.06:0,21,254	0/0:9,0:9:24.07:0,24,289	0/0:9,0:9:24.07:0,24,289	0/0:18,0:18:48.15:0,48,578	1/1:5,31:36:92.17:875,92,0	1/1:2,23:25:66.08:637,66,0	0/0:18,0:18:48.15:0,48,578	0/0:10,0:10:27.07:0,27,314	0/0:7,0:7:21.05:0,21,244	0/0:4,0:4:12.03:0,12,135	0/0:13,0:13:33.10:0,33,391	0/0:9,0:9:24.06:0,24,277	0/0:17,0:17:48.15:0,48,579	0/0:24,0:24:57.16:0,57,675	0/0:22,0:22:63.16:0,63,730	0/0:4,0:15:19.47:0,19,95
chr10	96366956	.	AACACACACAC	A	480.55	PASS	AB=1.000;AC=11;AF=0.212;AN=52;BaseQRankSum=3.093;DP=383;FS=7.128;HRun=0;HaplotypeScore=108.8003;InbreedingCoeff=0.5198;MQ=53.44;MQ0=11;MQRankSum=-2.416;QD=6.96;ReadPosRankSum=1.293;VQSLOD=1.4733;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:30.10:0,30,996	1/1:5,0:5:3:26,3,0	./.	./.	1/1:9,6:12:0.73:137,1,0	0/0:14,0:13:15.44:0,15,435	0/0:28,0:27:24.38:0,24,850	0/0:16,0:16:6.01:0,6,66	0/1:11,0:11:3.97:4,0,437	0/0:11,0:11:21.07:0,21,806	0/0:9,0:9:9.03:0,9,438	0/0:11,0:14:18.05:0,18,470	0/0:5,0:4:3.01:0,3,97	0/0:14,0:14:33.11:0,33,1345	0/0:6,4:11:3.01:0,3,36	0/0:11,0:11:18.06:0,18,795	0/0:13,0:13:11.53:0,12,327	0/0:19,0:19:18.03:0,18,522	0/0:8,0:6:0.94:0,1,2	1/1:9,6:14:8.69:200,9,0	0/0:17,0:15:0:0,0,0	0/0:9,0:9:18.05:0,18,519	0/0:5,0:7:9.03:0,9,319	0/0:29,0:38:25.82:0,26,1027	1/1:6,1:8:3.01:70,3,0	0/0:8,1:8:2.37:0,2,8	1/1:11,3:12:3.30:173,3,0	0/0:6,0:7:9.03:0,9,255
chr10	96367007	.	A	ACACA	179.75	PASS	AB=0.980;AC=20;AF=0.400;AN=50;BaseQRankSum=0.636;DP=472;FS=5.621;HRun=0;HaplotypeScore=96.8458;InbreedingCoeff=-0.0391;MQ=63.02;MQ0=17;MQRankSum=1.310;QD=0.59;ReadPosRankSum=-1.933;VQSLOD=1.3311;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:12.81:0,13,181	./.	./.	0/1:45,0:26:0.19:0,0,1	0/0:14,0:14:2.72:0,3,28	0/1:25,0:25:21.77:22,0,25	0/1:21,0:20:17.64:18,0,81	1/1:16,0:16:0.89:2,1,0	0/1:14,0:14:0.55:1,0,83	0/0:14,0:14:8.92:0,9,94	0/0:9,0:8:9.02:0,9,118	0/1:13,0:13:3.52:4,0,64	0/1:7,0:6:0:0,0,0	0/1:20,0:19:7.49:7,0,120	./.	0/1:14,0:13:30.77:31,0,173	1/1:17,0:16:10.74:137,11,0	0/1:17,4:25:45.56:46,0,64	1/1:13,0:13:0.89:2,1,0	0/0:13,0:13:0.89:0,1,2	1/1:22,0:20:0.45:1,0,0	0/0:6,0:6:0.82:0,1,34	0/1:7,0:7:19.18:21,0,19	0/1:31,0:31:6.38:6,0,132	0/0:9,0:9:3:0,3,28	0/1:12,0:9:0:0,0,0	0/0:12,0:11:5.55:0,6,55	0/0:7,0:7:3:0,3,28
chr10	96367284	.	CT	C	4659.79	PASS	AB=0.605;AC=39;AF=0.696;AN=56;BaseQRankSum=-11.065;DP=490;FS=21.662;HRun=11;HaplotypeScore=65.5976;InbreedingCoeff=0.7904;MQ=80.31;MQ0=12;MQRankSum=1.879;QD=16.01;ReadPosRankSum=3.656;VQSLOD=3.8894;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:27:51.79:0,52,253	1/1:1,3:4:8.99:74,9,0	0/0:38,0:23:8.73:0,9,193	0/0:33,1:22:5.85:0,6,153	1/1:2,9:11:20.96:172,21,0	1/1:4,10:14:29.96:246,30,0	0/1:8,15:22:32.31:272,0,32	0/0:23,0:31:41.37:0,41,230	1/1:3,9:13:28.99:228,29,0	1/1:5,8:12:23.97:197,24,0	1/1:2,5:6:14.98:122,15,0	1/1:1,15:16:23.06:280,23,0	1/1:0,16:16:35.96:295,36,0	1/1:3,12:15:26.96:222,27,0	1/1:1,13:16:43.03:332,43,0	0/0:7,1:17:1.23:0,1,96	0/0:16,0:26:30.32:0,30,174	0/0:5,0:22:42.75:0,43,221	1/1:14,26:39:42.44:543,42,0	1/1:1,7:8:17.98:148,18,0	1/1:2,14:16:29.96:246,30,0	1/1:2,8:10:14.95:164,15,0	1/1:1,5:6:14.98:123,15,0	1/1:1,18:19:35.96:295,36,0	1/1:2,5:8:11.02:80,11,0	1/1:2,20:22:55.74:448,56,0	1/1:7,7:14:20.96:172,21,0	0/0:1,0:1:2.84:0,3,14
chr10	96367293	.	TTTC	T	146.34	PASS	AB=0.889;AC=4;AF=0.071;AN=56;BaseQRankSum=-1.655;DP=443;FS=6.397;HRun=0;HaplotypeScore=89.4185;InbreedingCoeff=0.2782;MQ=74.48;MQ0=12;MQRankSum=-0.902;QD=3.05;ReadPosRankSum=-4.034;VQSLOD=-0.2886;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:21.37:0,21,682	0/0:3,0:3:8.73:0,9,60	0/0:33,0:18:27.12:0,27,228	0/0:30,0:18:10.09:0,10,246	0/0:12,0:12:26.27:0,26,217	0/0:11,0:11:29.89:0,30,236	0/0:23,0:22:55.92:0,56,472	0/1:21,4:25:99:99,0,325	0/0:11,0:11:32.15:0,32,249	0/0:12,0:11:32.40:0,32,237	0/0:6,0:5:14.10:0,14,92	0/0:18,0:18:44.82:0,45,351	0/0:17,0:17:38.60:0,39,291	0/0:12,0:12:26.44:0,26,192	0/0:15,0:14:42.78:0,43,300	0/0:17,0:15:30.07:0,30,386	0/1:20,2:21:99:130,0,399	0/0:20,0:20:46.64:0,47,546	0/0:32,0:31:64.35:0,64,521	0/0:7,0:7:17.71:0,18,131	0/0:14,0:14:29.68:0,30,228	0/0:9,0:9:23.96:0,24,223	0/0:6,0:6:17.69:0,18,128	0/0:19,0:19:38.35:0,38,287	0/0:7,0:7:14.13:0,14,94	0/0:20,0:20:43.33:0,43,381	0/0:11,0:11:29.89:0,30,234	1/1:0,1:1:2.94:18,3,0
chr10	96367604	.	GCCACC	G	1304.98	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.369;DP=416;FS=0.925;HRun=0;HaplotypeScore=79.9201;InbreedingCoeff=0.8069;MQ=96.33;MQ0=0;MQRankSum=-5.401;QD=52.20;ReadPosRankSum=-3.124;VQSLOD=2.7028;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.26:0,90,2692	0/0:2,0:2:6.02:0,6,194	0/0:22,0:22:63.20:0,63,1787	0/0:19,0:19:57.18:0,57,1512	0/0:5,0:5:15.05:0,15,485	0/0:10,0:10:30.10:0,30,946	0/0:21,0:21:63.22:0,63,1959	1/1:1,23:24:66.19:1347,66,0	0/0:17,0:17:51.13:0,51,1570	0/0:4,0:4:12.04:0,12,374	0/0:9,0:9:27.08:0,27,788	0/0:15,0:15:45.15:0,45,1390	0/0:15,0:15:45.15:0,45,1424	0/0:17,0:17:51.18:0,51,1589	0/0:15,0:15:45.15:0,45,1371	0/0:24,0:24:72.25:0,72,2213	0/0:27,0:27:81.24:0,81,2351	0/0:20,0:20:54.15:0,54,1580	0/0:12,0:12:33.10:0,33,996	0/0:8,0:8:24.08:0,24,775	0/0:38,0:38:99:0,108,3324	0/0:6,0:6:15.05:0,15,484	0/0:4,0:4:12.04:0,12,355	0/0:17,0:17:48.16:0,48,1551	0/0:7,0:7:21.07:0,21,678	0/0:15,0:15:42.14:0,42,1312	0/0:12,0:11:33.11:0,33,1045	1/1:0,1:1:3.01:67,3,0
chr10	96367802	.	T	TCCAACAA	4795.62	PASS	AB=0.834;AC=41;AF=0.732;AN=56;BaseQRankSum=3.063;DP=388;FS=5.275;HRun=0;HaplotypeScore=112.5595;InbreedingCoeff=0.0029;MQ=69.01;MQ0=1;MQRankSum=-2.305;QD=13.66;ReadPosRankSum=0.536;VQSLOD=3.4254;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:84.30:162,0,84	1/1:0,0:3:5.91:39,6,0	0/0:18,0:14:39.06:0,39,777	0/0:19,0:17:43.98:0,44,946	1/1:0,0:10:22.19:147,22,0	1/1:5,1:23:24.54:544,25,0	1/1:3,0:17:11.96:154,12,0	0/1:38,0:38:17.20:616,0,17	1/1:1,0:12:9.03:253,9,0	1/1:6,0:6:15.01:238,15,0	0/1:1,0:5:16.87:88,0,17	1/1:2,0:8:9.03:256,9,0	1/1:1,0:15:8.77:187,9,0	1/1:4,1:13:15.05:378,15,0	1/1:0,0:16:14.74:102,15,0	0/1:34,0:34:99:209,0,240	0/1:27,0:27:43.89:44,0,267	0/1:3,0:15:31.73:32,0,72	0/1:1,0:20:38.64:375,0,39	1/1:0,0:4:8.79:54,9,0	1/1:0,0:10:5.97:45,6,0	0/1:1,0:5:8.55:99,0,9	0/1:4,0:4:0.60:68,0,1	0/1:5,0:5:24.21:79,0,24	1/1:1,0:7:11.90:85,12,0	1/1:2,0:16:28.19:396,28,0	1/1:0,0:14:14.85:140,15,0	0/1:5,0:5:5.54:6,0,57
chr10	96367828	.	CAAT	C	1455.83	PASS	AB=1.000;AC=24;AF=0.444;AN=54;BaseQRankSum=-3.832;DP=334;FS=0.591;HRun=0;HaplotypeScore=91.6983;InbreedingCoeff=-0.2600;MQ=50.38;MQ0=0;MQRankSum=2.521;QD=5.00;ReadPosRankSum=-8.672;VQSLOD=-0.0249;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,4:23:33.56:244,34,0	0/1:2,0:2:9.18:18,0,9	0/0:7,0:5:2.98:0,3,21	0/0:10,0:9:3:0,3,25	0/0:8,0:8:15.04:0,15,94	0/1:19,0:19:85.28:85,0,123	0/1:11,0:11:28.25:60,0,28	1/1:36,0:34:25.38:191,25,0	0/1:11,0:11:34.87:35,0,48	0/0:5,0:5:12.04:0,12,204	0/0:3,0:3:6.02:0,6,80	0/0:4,0:4:6.83:0,7,46	0/1:11,0:11:14.65:15,0,49	0/1:8,0:8:14.62:15,0,27	0/1:13,0:13:27.37:27,0,52	1/1:20,9:29:53.80:568,54,0	0/1:23,0:23:2.70:3,0,223	0/1:12,0:12:14.86:18,0,15	0/1:27,0:27:66.03:66,0,165	0/0:3,0:3:5.85:0,6,48	0/1:11,0:11:13.42:59,0,13	0/1:4,0:4:17.04:17,0,17	./.	1/1:6,0:6:0.44:1,0,0	0/1:12,0:12:43.68:54,0,44	0/1:18,0:18:81.65:101,0,82	0/1:12,0:12:6.35:6,0,70	0/1:3,0:3:17.54:31,0,18
chr10	96368070	.	C	CAG	4742.84	PASS	AB=0.650;AC=10;AF=0.179;AN=56;BaseQRankSum=7.670;DP=628;FS=30.107;HRun=0;HaplotypeScore=102.3300;InbreedingCoeff=0.7528;MQ=55.45;MQ0=15;MQRankSum=-3.676;QD=26.65;ReadPosRankSum=-0.187;VQSLOD=3.3783;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,19:33:47.69:775,48,0	0/0:3,0:3:9.03:0,9,128	0/0:52,0:19:46.73:0,47,420	0/0:59,0:21:24.34:0,24,441	0/0:12,0:12:32.99:0,33,370	0/0:14,0:14:33.02:0,33,391	0/0:33,0:33:89.79:0,90,1135	1/1:39,6:45:67.52:1180,68,0	0/0:13,0:13:33.02:0,33,373	0/0:10,0:10:30.06:0,30,346	0/0:11,0:11:33.04:0,33,380	0/0:21,0:21:57.12:0,57,736	0/0:12,0:12:32.94:0,33,363	0/0:12,0:12:36.09:0,36,474	0/0:26,0:26:72.18:0,72,951	1/1:6,18:24:40.96:836,41,0	1/1:18,20:35:71.91:1227,72,0	0/1:18,9:27:14.74:574,0,15	0/0:21,0:20:59.93:0,60,594	0/0:11,0:11:33.02:0,33,376	0/0:42,0:41:96.03:0,96,1066	0/0:6,0:6:18.03:0,18,219	0/0:11,0:11:33:0,33,386	0/0:31,0:32:66.64:0,67,863	0/0:15,0:15:42.06:0,42,504	0/0:18,0:16:47.90:0,48,496	0/0:14,0:14:39.03:0,39,444	0/1:2,9:11:13.89:150,0,14
chr10	96368158	.	T	TCA	6167.89	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.748;DP=419;FS=10.424;HRun=0;HaplotypeScore=67.2864;InbreedingCoeff=0.9861;MQ=69.00;MQ0=1;MQRankSum=-7.514;QD=47.08;ReadPosRankSum=0.130;VQSLOD=5.4972;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:32:72.25:1318,72,0	0/0:6,0:6:15.01:0,15,177	0/0:13,0:12:33.06:0,33,446	0/0:32,0:32:86.31:0,86,1198	0/0:8,0:8:18.06:0,18,265	0/0:12,0:12:24.08:0,24,353	0/0:19,0:19:48.15:0,48,685	1/1:4,22:28:78.21:1295,78,0	0/0:10,0:10:30.10:0,30,442	0/0:9,0:9:27.09:0,27,397	0/0:14,0:14:39.13:0,39,563	0/0:13,0:13:36.11:0,36,510	0/0:8,0:8:24.08:0,24,353	0/0:17,0:17:48.16:0,48,706	0/0:11,0:11:30.10:0,30,442	1/1:0,17:17:48.16:880,48,0	1/1:5,22:28:69.24:1285,69,0	1/1:1,17:18:51.17:940,51,0	0/0:12,0:12:33.11:0,33,485	0/0:6,0:6:15.05:0,15,221	0/0:27,0:26:78.22:0,78,1116	0/0:6,0:6:18.06:0,18,265	0/0:6,0:6:18.06:0,18,265	0/0:18,0:18:48.16:0,48,705	0/0:9,0:9:21.07:0,21,309	0/0:16,0:16:48.12:0,48,682	0/0:16,0:16:48.16:0,48,702	1/1:0,8:8:24.08:449,24,0
chr10	96368660	.	C	CAAAAAAAAA	22267.37	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=11.806;DP=546;FS=3.172;HRun=6;HaplotypeScore=219.5127;InbreedingCoeff=0.4882;MQ=55.04;MQ0=1;MQRankSum=-10.766;QD=46.78;ReadPosRankSum=-4.224;VQSLOD=-0.5056;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:25:99:414,0,456	1/1:7,2:11:27.55:803,28,0	0/1:20,0:16:0.14:0,0,383	0/0:11,0:10:11.48:0,11,362	1/1:25,5:33:89.06:2208,89,0	1/1:15,0:17:41.95:1004,42,0	1/1:15,2:16:39.85:802,40,0	0/0:33,0:32:72.90:0,73,1517	1/1:10,0:11:30.07:800,30,0	1/1:23,0:24:45.97:949,46,0	1/1:16,0:16:39.10:835,39,0	1/1:14,0:13:38.83:759,39,0	1/1:9,0:10:27.09:708,27,0	1/1:15,0:14:42.06:814,42,0	1/1:9,1:10:30.09:909,30,0	0/1:21,0:21:99:643,0,171	0/1:19,0:19:99:281,0,318	0/1:12,0:12:99:108,0,263	1/1:23,0:22:51.11:1184,51,0	1/1:15,3:20:45.15:1414,45,0	1/1:10,1:10:10.59:242,11,0	1/1:18,1:22:51.11:1334,51,0	1/1:25,0:26:66.08:1165,66,0	1/1:10,0:12:15.52:366,16,0	1/1:15,2:16:37.27:821,37,0	1/1:30,6:38:93.15:2310,93,0	1/1:15,4:20:52.67:1394,53,0	0/0:26,0:26:74.51:0,75,1690
chr10	96368661	.	A	AAAAAAC	10165.10	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=7.794;DP=559;FS=9.721;HRun=0;HaplotypeScore=240.4790;InbreedingCoeff=0.6161;MQ=51.71;MQ0=1;MQRankSum=-8.889;QD=20.83;ReadPosRankSum=0.314;VQSLOD=3.2076;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,11:31:36.12:1092,36,0	0/1:11,0:11:0.85:235,0,1	0/1:20,0:16:9.81:10,0,66	0/0:11,0:10:9.01:0,9,150	1/1:34,0:34:47.50:635,47,0	1/1:17,0:17:8.64:336,9,0	1/1:16,0:15:14.17:214,14,0	0/0:34,0:33:36.51:0,37,703	1/1:12,0:12:18.06:255,18,0	1/1:24,0:24:23.33:331,23,0	1/1:17,0:16:28.59:292,29,0	1/1:16,0:13:12.91:171,13,0	1/1:11,0:10:3.12:267,3,0	1/1:17,0:14:17.27:207,17,0	1/1:12,0:11:20.98:298,21,0	1/1:4,17:21:45.15:1465,45,0	1/1:12,7:21:21.07:684,21,0	1/1:12,4:17:21.07:624,21,0	1/1:23,0:21:6.33:283,6,0	1/1:20,0:20:36.05:508,36,0	1/1:10,0:9:3.01:52,3,0	1/1:23,0:22:29.63:412,30,0	1/1:26,0:25:19.28:263,19,0	1/1:12,0:12:9.39:110,9,0	1/1:19,0:16:13.51:202,14,0	1/1:37,0:37:50.73:770,51,0	1/1:20,0:20:21.08:451,21,0	0/0:26,0:26:63.20:0,63,1262
chr10	96368665	.	AAC	A	2414.06	PASS	AB=0.986;AC=22;AF=0.393;AN=56;BaseQRankSum=-3.811;DP=554;FS=24.925;HRun=0;HaplotypeScore=180.5965;InbreedingCoeff=-0.3720;MQ=52.01;MQ0=1;MQRankSum=-0.148;QD=6.56;ReadPosRankSum=-3.489;VQSLOD=1.4329;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:82.71:0,83,985	0/1:11,0:11:33.96:96,0,34	0/0:21,0:17:15.40:0,15,492	0/0:14,0:13:32.37:0,32,374	0/1:33,0:33:69.74:199,0,70	0/1:18,0:18:65.14:65,0,129	0/1:17,1:17:43.45:185,0,43	0/0:31,0:30:81.24:0,81,1319	0/1:11,0:11:76.27:100,0,76	0/1:19,1:20:99:161,0,103	0/1:16,0:15:69.80:70,0,116	0/1:16,1:14:24.06:205,0,24	0/1:12,0:11:29.86:30,0,99	0/1:18,0:15:50.74:175,0,51	0/1:12,0:11:62.85:89,0,63	0/0:23,0:23:63.12:0,63,712	0/0:21,0:21:51.09:0,51,650	0/0:17,0:17:41.93:0,42,503	0/1:25,0:22:88.16:202,0,88	0/1:20,0:20:49.07:49,0,125	1/1:9,0:8:2.45:40,2,0	0/1:20,1:20:67.88:177,0,68	0/1:25,0:24:30.19:289,0,30	1/1:11,0:11:7.89:71,8,0	0/1:17,1:15:4.52:115,0,5	0/1:35,0:35:99:199,0,132	0/1:18,0:18:61.12:61,0,126	0/0:26,0:26:78.26:0,78,1290
chr10	96368667	.	C	CA	5512.39	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=10.903;DP=568;FS=5.529;HRun=6;HaplotypeScore=172.8193;InbreedingCoeff=0.7363;MQ=53.87;MQ0=1;MQRankSum=-8.649;QD=13.09;ReadPosRankSum=1.195;VQSLOD=2.8587;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:27.42:0,27,538	1/1:5,6:11:18.60:201,19,0	0/0:22,0:18:21.45:0,21,363	0/0:16,0:15:2.02:0,2,176	1/1:16,19:35:63.06:513,63,0	1/1:11,9:20:27.67:319,28,0	1/1:13,6:18:21.23:258,21,0	0/0:33,0:32:80.90:0,81,836	1/1:8,5:14:17.37:187,17,0	1/1:11,8:19:20:332,20,0	1/1:7,11:17:39.84:391,40,0	1/1:12,6:15:11.28:157,11,0	1/1:3,9:11:30.01:303,30,0	1/1:13,5:15:16.06:184,16,0	1/1:6,7:12:19.02:193,19,0	0/1:23,0:23:52.07:52,0,142	0/1:20,0:20:5.65:6,0,239	0/0:17,0:17:16.31:0,16,297	1/1:17,9:23:37.11:351,37,0	1/1:6,11:17:39.26:373,39,0	1/1:8,2:9:9.85:64,10,0	1/1:11,10:20:32.10:334,32,0	1/1:21,6:26:5.95:194,6,0	1/1:6,4:10:7.45:89,7,0	1/1:14,4:15:19.11:155,19,0	1/1:17,16:34:52.50:527,53,0	1/1:7,10:18:34.73:330,35,0	0/0:26,0:26:66.16:0,66,709
chr10	96368671	.	AAC	A	2541.18	PASS	AB=0.947;AC=34;AF=0.607;AN=56;BaseQRankSum=-2.244;DP=577;FS=10.836;HRun=0;HaplotypeScore=188.6210;InbreedingCoeff=0.4429;MQ=55.57;MQ0=1;MQRankSum=-2.744;QD=6.62;ReadPosRankSum=-5.112;VQSLOD=1.3175;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:81.03:0,81,1096	1/1:8,2:10:3.80:84,4,0	0/0:21,0:17:44.65:0,45,689	0/0:19,0:18:47.21:0,47,571	1/1:30,5:35:1.56:220,2,0	1/1:19,1:20:2.61:85,3,0	1/1:18,0:17:17.21:189,17,0	0/0:35,0:34:94.40:0,94,1357	0/1:13,1:14:3.98:107,0,4	1/1:20,0:20:5.53:192,6,0	0/1:19,0:18:9.92:79,0,10	1/1:19,0:16:18.57:184,19,0	0/1:12,0:11:2.43:31,0,2	1/1:19,0:16:17.98:201,18,0	1/1:12,3:14:6.94:91,7,0	0/0:23,0:23:63.18:0,63,794	0/0:20,0:20:48.14:0,48,659	0/0:16,0:16:39.13:0,39,612	1/1:21,5:23:31.06:268,31,0	0/1:17,0:17:6.80:63,0,7	1/1:10,2:11:1.04:39,1,0	1/1:21,0:20:11.39:196,11,0	1/1:25,1:25:28.47:295,28,0	1/1:10,0:10:8.21:74,8,0	1/1:17,3:17:0.97:111,1,0	0/1:27,6:33:12.57:168,0,13	0/1:16,2:18:22.23:50,0,22	0/0:27,0:27:54.42:0,54,1221
chr10	96368672	.	AC	A	4510.82	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=9.987;DP=575;FS=0.349;HRun=1;HaplotypeScore=176.0851;InbreedingCoeff=0.9633;MQ=56.83;MQ0=1;MQRankSum=-9.193;QD=11.84;ReadPosRankSum=2.379;VQSLOD=3.5937;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:80.67:0,81,820	1/1:9,1:10:26.14:134,26,0	0/0:22,0:18:48.58:0,49,598	0/0:19,0:18:43.64:0,44,436	1/1:33,0:33:74.46:388,74,0	1/1:20,1:21:37.29:252,37,0	1/1:15,3:17:40.66:253,41,0	0/0:34,0:33:94.17:0,94,1138	1/1:11,3:14:16.96:136,17,0	1/1:15,4:19:36.73:259,37,0	1/1:17,2:18:37.68:184,38,0	1/1:18,1:16:34.15:207,34,0	1/1:12,0:11:29.66:137,30,0	1/1:18,1:16:45.75:298,46,0	1/1:15,0:14:30.62:162,31,0	0/0:23,0:23:62.70:0,63,567	0/0:20,0:20:47.87:0,48,483	0/0:17,0:17:39.02:0,39,477	1/1:26,0:23:61.36:366,61,0	1/1:17,0:17:40.80:210,41,0	1/1:11,1:11:2.54:44,3,0	1/1:17,4:20:55.64:303,56,0	1/1:18,8:25:55.42:416,55,0	1/1:11,0:11:13.81:75,14,0	1/1:17,1:15:26.12:156,26,0	1/1:30,2:32:57.94:341,58,0	1/1:19,0:19:38.99:189,39,0	0/0:27,0:27:54.42:0,54,988
chr10	96368673	.	C	CA	7011.25	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=9.162;DP=580;FS=2.721;HRun=5;HaplotypeScore=169.0215;InbreedingCoeff=0.7248;MQ=57.80;MQ0=1;MQRankSum=-8.980;QD=16.34;ReadPosRankSum=3.386;VQSLOD=3.2914;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:11.42:0,11,387	1/1:3,7:10:12.43:229,12,0	0/0:22,0:18:27.04:0,27,344	0/0:19,0:19:34.96:0,35,388	1/1:11,22:33:62.71:685,63,0	1/1:6,15:21:28.63:381,29,0	1/1:8,10:17:20.49:300,20,0	0/0:33,0:32:71.93:0,72,765	1/1:6,8:14:20.77:301,21,0	1/1:8,12:20:21.81:411,22,0	1/1:5,16:20:35.29:394,35,0	1/1:12,7:16:26.33:384,26,0	1/1:3,9:11:27.55:304,28,0	1/1:13,6:16:19.83:247,20,0	1/1:4,7:14:13.44:229,13,0	0/1:23,0:23:51.71:52,0,126	0/1:20,0:20:19.49:19,0,154	0/0:17,0:17:15.58:0,16,287	1/1:17,10:24:32.69:500,33,0	1/1:6,12:18:44.99:490,45,0	1/1:6,6:11:3.70:69,4,0	1/1:7,15:21:35.71:445,36,0	1/1:15,11:25:4.49:211,4,0	1/1:4,7:11:6.20:81,6,0	1/1:6,11:14:16.50:234,16,0	1/1:13,19:32:49.10:656,49,0	1/1:6,13:19:31.46:390,31,0	0/0:27,0:27:76.96:0,77,834
chr10	96369990	.	A	ATG	4095.33	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-12.133;DP=777;FS=16.201;HRun=0;HaplotypeScore=92.5257;InbreedingCoeff=0.9328;MQ=60.80;MQ0=2;MQRankSum=0.292;QD=33.03;ReadPosRankSum=4.242;VQSLOD=5.1085;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,45:50:96.33:1584,96,0	0/0:17,0:17:48.14:0,48,586	0/0:14,0:8:7.66:0,8,91	0/0:11,0:6:3.01:0,3,33	0/0:24,0:24:57.16:0,57,698	0/0:35,0:34:90.24:0,90,1084	0/0:22,0:22:63.17:0,63,760	0/0:40,0:40:90.07:0,90,1025	0/0:31,0:32:84.05:0,84,985	0/0:31,0:31:69.22:0,69,862	0/0:20,0:20:51.12:0,51,597	0/0:34,0:34:87.24:0,87,1048	0/0:22,0:22:57.10:0,57,643	0/0:30,0:30:81.15:0,81,940	0/0:31,0:31:87.18:0,87,1005	1/1:3,23:26:57.19:940,57,0	1/1:1,29:30:60.21:990,60,0	1/1:5,13:18:36.12:581,36,0	0/0:8,0:8:24.05:0,24,268	0/0:36,0:36:90.16:0,90,1041	0/0:36,0:36:90.27:0,90,1110	0/0:27,0:27:68.97:0,69,797	0/0:31,0:32:75.13:0,75,855	0/0:26,0:26:66.18:0,66,797	0/0:35,0:35:84.23:0,84,1011	0/0:35,0:35:87.25:0,87,1062	0/0:24,0:24:63.13:0,63,731	0/0:31,0:31:93.03:0,93,1096
chr10	96370749	.	T	TAA	3793.40	PASS	AB=0.605;AC=20;AF=0.357;AN=56;BaseQRankSum=-1.323;DP=585;FS=1.308;HRun=14;HaplotypeScore=86.4162;InbreedingCoeff=0.8162;MQ=77.37;MQ0=1;MQRankSum=0.206;QD=15.68;ReadPosRankSum=-1.754;VQSLOD=2.5735;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:23:49.76:0,50,422	1/1:1,6:7:12.04:157,12,0	0/0:18,0:11:7.68:0,8,77	0/0:20,0:18:7.62:0,8,53	1/1:5,21:32:68.06:716,68,0	0/0:22,0:26:38.56:0,39,438	0/0:23,0:23:50.79:0,51,426	1/1:10,2:29:15.78:182,16,0	0/0:17,0:18:18.72:0,19,158	0/0:22,0:23:38.70:0,39,365	0/0:26,0:25:47.57:0,48,390	0/0:30,0:31:30.04:0,30,377	0/0:21,0:22:50.48:0,50,401	0/0:16,0:16:35.82:0,36,300	1/1:3,13:23:38.31:365,38,0	0/0:26,0:26:50.64:0,51,422	0/0:15,0:15:32.40:0,32,275	0/0:17,0:21:38.24:0,38,340	1/1:5,11:17:35.45:423,35,0	1/1:4,14:21:38.69:423,39,0	1/1:4,8:16:19.79:213,20,0	0/0:12,0:12:20.74:0,21,165	0/0:16,0:19:37.33:0,37,323	0/0:3,0:3:5.92:0,6,50	0/1:13,14:32:24.01:417,0,24	1/1:21,3:28:21.24:441,21,0	1/1:8,11:23:40.61:417,41,0	0/1:4,0:14:5.37:40,0,5
chr10	96371138	.	CAAA	C	8661.31	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-2.062;DP=537;FS=0.000;HRun=13;HaplotypeScore=104.8595;InbreedingCoeff=0.8488;MQ=56.90;MQ0=11;MQRankSum=-2.015;QD=18.39;ReadPosRankSum=8.042;VQSLOD=3.0118;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,32:41:13.71:741,14,0	1/1:1,0:3:2.94:18,3,0	0/0:12,0:5:12.51:0,13,110	0/0:12,0:6:5.27:0,5,135	1/1:1,0:31:37.80:364,38,0	1/1:1,18:19:33.10:397,33,0	1/1:0,13:12:27.08:328,27,0	0/0:7,0:31:45.48:0,45,198	1/1:2,15:17:36.09:434,36,0	1/1:1,18:18:51.15:610,51,0	1/1:0,16:17:44.96:505,45,0	1/1:2,22:25:54.07:638,54,0	1/1:3,12:15:13.08:311,13,0	1/1:3,16:18:24.05:292,24,0	1/1:2,0:16:17.63:107,18,0	1/1:3,11:14:27.07:328,27,0	1/1:3,27:30:52.52:753,53,0	1/1:4,22:26:8.04:500,8,0	1/1:4,1:21:30.62:212,31,0	1/1:3,0:21:35.73:242,36,0	1/1:2,0:4:8.55:46,9,0	1/1:1,16:15:29.94:338,30,0	1/1:4,14:15:36.09:433,36,0	1/1:5,18:23:42.07:506,42,0	1/1:6,0:18:29.38:178,29,0	1/1:1,0:19:25.44:185,25,0	1/1:3,0:18:32.34:196,32,0	0/0:2,0:7:10.46:0,10,40
chr10	96372192	.	GA	G	9503.92	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-4.524;DP=553;FS=0.000;HRun=9;HaplotypeScore=60.2482;InbreedingCoeff=0.9930;MQ=73.67;MQ0=0;MQRankSum=0.611;QD=23.88;ReadPosRankSum=3.904;VQSLOD=5.4719;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:30:65.65:0,66,348	1/1:0,8:8:14.85:137,15,0	0/0:9,0:9:15.04:0,15,173	0/0:10,0:10:18.04:0,18,198	1/1:1,18:19:51.02:466,51,0	1/1:1,27:28:72.04:659,72,0	1/1:1,10:11:30.01:275,30,0	0/0:33,0:33:84.23:0,84,954	1/1:1,17:18:51.03:467,51,0	1/1:2,19:21:51.01:462,51,0	1/1:1,21:22:57.03:522,57,0	1/1:1,23:24:63.03:577,63,0	1/1:2,19:21:48.02:439,48,0	1/1:1,17:18:51.03:467,51,0	1/1:3,22:25:57.03:522,57,0	0/0:3,0:21:51.17:0,51,260	0/0:2,0:13:28.56:0,29,154	0/0:2,0:21:48.46:0,48,266	1/1:0,24:24:69.02:623,69,0	1/1:2,16:18:48.01:439,48,0	1/1:0,16:16:45.02:412,45,0	1/1:3,21:24:54.02:493,54,0	1/1:0,13:13:39.02:357,39,0	1/1:0,13:13:36.02:329,36,0	1/1:2,18:20:54.03:493,54,0	1/1:1,28:29:81.02:735,81,0	1/1:2,24:26:69.04:631,69,0	0/0:18,0:18:51.15:0,51,588
chr10	96372575	.	G	GA	2623.24	PASS	AB=0.594;AC=6;AF=0.107;AN=56;BaseQRankSum=13.353;DP=628;FS=5.641;HRun=5;HaplotypeScore=70.2106;InbreedingCoeff=0.5870;MQ=60.98;MQ0=15;MQRankSum=1.511;QD=22.42;ReadPosRankSum=1.133;VQSLOD=2.6364;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,28:36:38.29:843,0,38	0/0:8,0:8:21.05:0,21,226	0/0:17,0:6:3.97:0,4,89	0/0:23,0:12:16.54:0,17,178	0/0:27,0:27:78.19:0,78,833	0/0:25,0:25:75.17:0,75,798	0/0:18,0:18:51.10:0,51,538	0/0:40,0:38:95.94:0,96,1020	0/0:16,0:16:48.12:0,48,515	0/0:31,0:31:87.21:0,87,924	0/0:21,0:21:51.09:0,51,529	0/0:19,0:18:48.12:0,48,515	0/0:15,0:15:45.09:0,45,473	0/0:13,0:13:36.07:0,36,376	0/0:23,0:23:66.16:0,66,708	1/1:5,22:27:53.98:668,54,0	1/1:1,28:29:66.21:818,66,0	0/1:10,15:24:29.56:430,0,30	0/0:20,0:19:48.12:0,48,515	0/0:26,0:26:72.18:0,72,773	0/0:18,0:18:48.12:0,48,515	0/0:20,0:20:54.13:0,54,580	0/0:20,0:20:54.14:0,54,580	0/0:31,0:31:93.18:0,93,979	0/0:16,0:16:42.08:0,42,441	0/0:19,0:19:54.14:0,54,579	0/0:26,0:26:72.18:0,72,773	0/0:18,0:18:54.14:0,54,580
chr10	96373186	.	TCTCTGAGA	T	23548.22	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=13.459;DP=520;FS=9.964;HRun=0;HaplotypeScore=187.9241;InbreedingCoeff=0.9505;MQ=75.24;MQ0=0;MQRankSum=-14.748;QD=69.26;ReadPosRankSum=4.212;VQSLOD=4.0989;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,4210	1/1:0,5:5:3.01:90,3,0	0/0:21,0:21:62.86:0,63,2192	0/0:24,0:24:56.29:0,56,2060	1/1:2,25:27:66.19:1732,66,0	1/1:12,22:33:95.81:2181,96,0	1/1:2,14:16:45.05:1205,45,0	0/0:33,0:33:93.25:0,93,3688	1/1:2,12:14:42.13:1148,42,0	1/1:2,14:16:45.11:1214,45,0	1/1:2,14:16:39.12:1094,39,0	1/1:4,18:22:63.19:1735,63,0	1/1:1,8:8:24.07:657,24,0	1/1:3,13:15:45.03:1140,45,0	1/1:1,18:18:54.16:1553,54,0	0/0:22,0:22:66.21:0,66,2852	0/0:23,0:23:60.18:0,60,2454	0/0:15,0:15:42.14:0,42,1852	1/1:0,16:15:44.42:1010,44,0	1/1:4,20:24:57.13:1624,57,0	1/1:5,3:7:6:114,6,0	1/1:2,10:12:30.09:793,30,0	1/1:1,11:12:24.08:717,24,0	1/1:2,6:8:15.03:331,15,0	1/1:1,21:22:60.21:1793,60,0	1/1:3,14:17:48.09:1310,48,0	1/1:3,24:26:75.22:2107,75,0	0/0:8,0:8:24.08:0,24,1106
chr10	96373239	.	TAAGTA	T	17112.47	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=15.283;DP=513;FS=6.026;HRun=0;HaplotypeScore=165.7762;InbreedingCoeff=0.9833;MQ=77.66;MQ0=0;MQRankSum=-11.998;QD=46.76;ReadPosRankSum=4.883;VQSLOD=4.8359;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.32:0,93,2836	1/1:0,6:6:9.03:192,9,0	0/0:17,0:17:51.18:0,51,1510	0/0:17,0:17:42.09:0,42,1172	1/1:2,28:30:78.20:1555,78,0	1/1:5,22:26:57.20:1213,57,0	1/1:4,20:24:45.15:947,45,0	0/0:25,0:25:69.24:0,69,2139	1/1:2,14:16:39.13:830,39,0	1/1:4,13:17:36.09:711,36,0	1/1:3,19:22:54.19:1146,54,0	1/1:0,14:14:42.14:884,42,0	1/1:1,8:8:24.08:511,24,0	1/1:2,18:20:51.18:1084,51,0	1/1:3,15:17:36.12:756,36,0	0/0:17,0:17:48.16:0,48,1453	0/0:18,0:18:51.18:0,51,1572	0/0:15,0:15:45.15:0,45,1358	1/1:4,4:8:12.04:255,12,0	1/1:0,24:24:65.96:1351,66,0	1/1:4,19:23:36.04:677,36,0	1/1:2,11:13:30.10:628,30,0	1/1:0,18:18:51.18:1083,51,0	1/1:3,16:19:32.72:610,33,0	1/1:1,19:20:45.15:957,45,0	1/1:4,14:18:39.13:830,39,0	1/1:4,16:20:42.14:893,42,0	0/0:7,0:7:18.06:0,18,563
chr10	96373452	.	A	AGAG	667.48	PASS	AB=0.968;AC=19;AF=0.352;AN=54;BaseQRankSum=4.870;DP=346;FS=12.116;HRun=0;HaplotypeScore=68.2367;InbreedingCoeff=0.2734;MQ=39.34;MQ0=31;MQRankSum=-0.069;QD=5.17;ReadPosRankSum=6.180;VQSLOD=0.3235;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:15.39:0,15,473	0/0:2,0:2:2.04:0,2,6	0/0:48,0:6:9.03:0,9,132	0/0:34,0:6:17.58:0,18,164	0/0:10,0:9:5.35:0,5,21	1/1:9,0:7:2.90:16,3,0	0/0:16,0:14:0.47:0,0,1	0/1:23,0:23:99:146,0,163	0/0:11,0:10:0:0,0,0	0/1:14,0:11:5.48:31,0,5	0/0:9,0:9:0:0,0,0	1/1:11,0:11:11.81:125,12,0	0/0:9,0:8:1.82:0,2,5	1/1:5,0:5:0.23:44,0,0	1/1:5,0:5:3.01:36,3,0	0/0:14,0:13:33.65:0,34,388	0/1:14,0:11:15.56:16,0,170	0/0:17,0:16:28.08:0,28,250	0/0:7,0:4:7.85:0,8,63	0/1:5,0:4:0.69:17,0,1	0/1:5,0:6:1.08:5,0,1	./.	0/0:8,0:7:0:0,0,0	1/1:6,0:6:5.37:33,5,0	0/1:10,0:10:0.74:29,0,1	0/0:6,0:5:1.12:0,1,69	0/1:7,0:6:39.79:40,0,64	1/1:7,5:10:14.24:273,14,0
chr10	96373454	.	A	AGAGAG	1444.09	PASS	AB=1.000;AC=31;AF=0.596;AN=52;BaseQRankSum=4.744;DP=327;FS=0.000;HRun=0;HaplotypeScore=70.7540;InbreedingCoeff=0.1447;MQ=39.16;MQ0=30;MQRankSum=1.425;QD=7.41;ReadPosRankSum=5.476;VQSLOD=0.5508;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:23:2.06:2,0,348	1/1:2,0:2:2.76:13,3,0	0/0:43,0:5:8.95:0,9,144	0/0:31,0:5:13.85:0,14,176	0/0:10,0:9:2.60:0,3,7	1/1:9,0:7:2.94:18,3,0	1/1:17,0:15:5.66:29,6,0	0/1:21,0:21:78.66:260,0,79	0/0:11,0:10:0:0,0,0	1/1:15,0:12:7.03:140,7,0	0/0:9,0:9:0:0,0,0	1/1:12,0:12:11.99:198,12,0	0/1:9,0:8:0:0,0,0	1/1:5,0:5:1.04:39,1,0	1/1:1,4:5:3.01:68,3,0	0/0:13,0:12:6.27:0,6,261	0/1:11,0:8:31.30:65,0,31	0/1:14,0:13:29.96:88,0,30	0/0:7,0:3:5.98:0,6,80	1/1:5,0:4:1.37:50,1,0	1/1:6,0:6:1.61:35,2,0	./.	./.	1/1:6,0:6:5.56:79,6,0	1/1:11,0:10:1.34:64,1,0	0/1:6,0:5:14.70:21,0,15	0/1:7,0:6:35.56:79,0,36	1/1:9,1:7:16.45:335,16,0
chr10	96374391	.	T	TA	2724.02	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-5.258;DP=625;FS=0.432;HRun=7;HaplotypeScore=108.7915;InbreedingCoeff=0.9967;MQ=70.04;MQ0=0;MQRankSum=-0.988;QD=26.19;ReadPosRankSum=0.563;VQSLOD=3.1810;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,31:36:69.21:833,69,0	0/0:15,0:15:30.04:0,30,289	0/0:18,0:17:26.60:0,27,270	0/0:22,0:17:17.71:0,18,230	0/0:27,0:27:81.09:0,81,766	0/0:25,0:24:68.93:0,69,645	0/0:19,0:19:47.99:0,48,441	0/0:21,0:21:51.06:0,51,488	0/0:16,0:16:38.11:0,38,369	0/0:16,0:16:47.44:0,47,440	0/0:19,0:19:54.07:0,54,516	0/0:21,0:21:54.07:0,54,515	0/0:25,0:25:72.09:0,72,687	0/0:16,0:16:33.01:0,33,306	0/0:24,0:24:69.09:0,69,661	1/1:2,22:24:63.19:761,63,0	1/1:1,31:32:81.18:960,81,0	1/1:4,8:12:30:331,30,0	0/0:26,0:26:60.06:0,60,568	0/0:17,0:17:42.02:0,42,396	0/0:25,0:25:60.07:0,60,572	0/0:17,0:17:47.73:0,48,438	0/0:24,0:24:51.02:0,51,478	0/0:19,0:19:51.04:0,51,479	0/0:24,0:24:63.10:0,63,608	0/0:32,0:32:78.07:0,78,733	0/0:42,0:42:90.12:0,90,860	0/0:10,0:10:30.05:0,30,290
chr10	96374408	.	CT	C	2921.49	PASS	AB=0.984;AC=29;AF=0.518;AN=56;BaseQRankSum=2.555;DP=592;FS=5.336;HRun=4;HaplotypeScore=114.2369;InbreedingCoeff=0.1817;MQ=73.49;MQ0=0;MQRankSum=-0.940;QD=6.79;ReadPosRankSum=-2.927;VQSLOD=-0.5543;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:6.72:0,7,113	1/1:13,0:13:29.95:150,30,0	0/0:20,0:18:39.36:0,39,429	0/0:19,1:13:10.79:0,11,204	1/1:28,0:28:54.21:335,54,0	0/0:25,0:24:32.59:0,33,160	0/1:16,0:16:41.73:42,0,44	0/0:17,0:17:42.09:0,42,537	0/1:17,2:19:66.25:66,0,82	0/1:22,0:22:36.01:90,0,36	0/1:20,1:21:42.25:42,0,84	0/1:19,0:19:34.31:34,0,71	0/1:25,1:26:97.10:127,0,97	0/1:17,0:17:12.99:13,0,100	1/1:23,0:23:37.34:287,37,0	0/1:22,0:22:44.31:131,0,44	0/0:26,0:26:33.57:0,34,178	0/1:14,0:14:13.55:14,0,96	1/1:24,0:24:46.80:299,47,0	1/1:15,1:16:20.60:151,21,0	1/1:18,0:18:41.94:224,42,0	0/1:20,0:20:27.29:27,0,91	0/1:21,0:21:23.54:24,0,99	0/0:15,0:15:4.62:0,5,65	1/1:21,0:21:45.65:205,46,0	1/1:29,0:29:69.36:416,69,0	1/1:41,0:41:89.98:439,90,0	0/0:9,0:9:23.55:0,24,285
chr10	96374411	.	T	TA	4565.53	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-6.514;DP=598;FS=2.995;HRun=0;HaplotypeScore=116.7954;InbreedingCoeff=0.8871;MQ=74.08;MQ0=0;MQRankSum=-1.939;QD=19.18;ReadPosRankSum=1.413;VQSLOD=6.2389;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:30:35.94:0,36,314	1/1:1,11:13:27.93:297,28,0	0/0:21,0:19:47.63:0,48,494	0/1:21,0:14:13:13,0,185	1/1:6,23:29:23.21:562,23,0	0/0:24,0:23:68.25:0,68,380	0/0:17,0:17:39.36:0,39,209	0/0:17,0:17:45.14:0,45,609	0/0:19,1:20:22.06:0,22,246	0/0:22,0:22:50.78:0,51,234	0/0:21,0:21:50.80:0,51,281	0/0:19,0:19:46.51:0,47,253	0/0:26,0:26:56.54:0,57,326	0/0:16,0:16:41.48:0,41,251	1/1:12,13:25:4.02:419,4,0	0/0:18,0:21:17.85:0,18,193	0/0:27,0:28:72.86:0,73,423	0/0:12,0:14:35.91:0,36,232	1/1:7,12:21:15.38:379,15,0	1/1:3,13:16:12.66:313,13,0	1/1:2,16:18:33.08:497,33,0	0/0:20,0:20:51.84:0,52,285	0/0:23,0:23:12.43:0,12,258	0/0:12,0:12:32.90:0,33,183	1/1:1,19:20:48.67:525,49,0	1/1:13,18:31:47.11:634,47,0	1/1:8,36:44:83.58:927,84,0	0/0:8,0:8:23.11:0,23,299
chr10	96374814	.	GAGAGAT	G	1905.80	PASS	AB=0.953;AC=33;AF=0.589;AN=56;BaseQRankSum=2.547;DP=520;FS=5.758;HRun=0;HaplotypeScore=171.3941;InbreedingCoeff=0.3806;MQ=62.83;MQ0=26;MQRankSum=-0.166;QD=7.16;ReadPosRankSum=-1.318;VQSLOD=2.2195;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:13:7.61:8,0,19	0/0:1,0:1:3.01:0,3,38	0/0:78,0:24:41.35:0,41,394	0/0:103,0:32:42.09:0,42,475	0/1:21,3:24:32.31:32,0,401	1/1:16,2:16:33:270,33,0	1/1:12,2:14:22.64:161,23,0	0/1:15,0:14:62.97:63,0,167	1/1:13,0:12:21.59:183,22,0	1/1:10,1:10:27.37:221,27,0	1/1:7,0:6:6.01:63,6,0	1/1:11,1:12:10.16:97,10,0	1/1:12,1:13:28.95:251,29,0	1/1:6,1:7:6.94:55,7,0	0/0:19,1:20:16.32:0,16,584	1/1:8,0:8:7.49:27,7,0	1/1:14,0:14:3.64:44,4,0	0/1:11,0:11:11.06:11,0,14	0/0:7,0:6:5.38:0,5,59	0/0:13,0:12:18.91:0,19,134	0/0:17,0:14:25.11:0,25,266	1/1:6,0:6:8.80:66,9,0	1/1:10,3:13:9.90:192,10,0	1/1:13,0:13:23.93:187,24,0	0/1:12,1:13:21.94:22,0,143	0/1:24,5:29:99:116,0,501	0/0:14,0:14:23:0,23,454	0/1:9,0:8:31.68:32,0,81
chr10	96374819	.	ATGAG	A	1214.67	PASS	AB=0.552;AC=7;AF=0.125;AN=56;BaseQRankSum=2.742;DP=518;FS=0.757;HRun=0;HaplotypeScore=167.2264;InbreedingCoeff=0.7100;MQ=65.91;MQ0=25;MQRankSum=-5.992;QD=24.79;ReadPosRankSum=2.391;VQSLOD=3.2899;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:3,9:13:4.63:114,0,5	0/0:1,0:1:3.01:0,3,42	0/0:82,0:26:16.44:0,16,796	0/0:108,0:34:43.07:0,43,867	0/0:20,0:20:27.27:0,27,884	0/0:18,0:16:31.04:0,31,500	0/0:16,0:17:36.12:0,36,544	0/0:18,0:17:48.10:0,48,752	0/0:14,0:13:22.03:0,22,367	0/0:12,0:11:27.46:0,27,420	0/0:6,0:6:9.87:0,10,129	0/0:11,0:11:21.07:0,21,334	0/0:13,0:13:27.52:0,28,405	0/0:7,0:7:8.43:0,8,134	0/0:16,0:16:39.13:0,39,721	1/1:1,7:8:9.03:185,9,0	1/1:1,7:14:26.92:475,27,0	1/1:0,4:11:30.10:583,30,0	0/0:6,0:4:6.01:0,6,97	0/0:14,0:13:27.96:0,28,472	0/0:14,0:12:8.53:0,9,407	0/0:6,0:6:8.84:0,9,158	0/0:14,0:14:33.11:0,33,548	0/0:14,0:15:24.13:0,24,452	0/0:12,0:12:36.12:0,36,653	0/0:25,0:25:66.55:0,67,1174	0/0:13,0:13:8.12:0,8,536	0/0:7,0:6:15.52:0,16,254
chr10	96374823	.	G	GA	341.54	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=4.781;DP=524;FS=6.121;HRun=1;HaplotypeScore=158.2475;InbreedingCoeff=0.7643;MQ=66.65;MQ0=24;MQRankSum=-5.235;QD=6.10;ReadPosRankSum=1.671;VQSLOD=0.6753;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,3:12:4.45:35,4,0	0/0:2,0:1:3.01:0,3,42	0/0:79,0:28:37.81:0,38,567	0/0:112,2:36:28.67:0,29,589	0/0:19,0:19:47.71:0,48,671	0/0:18,0:16:34.93:0,35,470	0/0:17,0:18:39.12:0,39,514	0/0:18,0:17:51.12:0,51,672	0/0:16,0:15:29.88:0,30,408	0/0:12,0:11:28.96:0,29,417	0/1:7,0:7:1.31:1,0,115	0/0:13,0:13:24.08:0,24,337	0/0:14,0:14:36.12:0,36,488	0/0:7,0:7:8.76:0,9,124	0/0:15,0:15:39.13:0,39,545	1/1:8,0:8:8.90:61,9,0	1/1:8,6:14:19.28:154,19,0	1/1:5,6:12:26.63:236,27,0	0/0:5,0:3:6.02:0,6,84	0/0:13,0:12:30.08:0,30,401	0/0:13,0:11:23.67:0,24,314	0/0:6,0:6:8.85:0,9,126	0/0:14,0:14:33.11:0,33,461	0/0:15,0:15:29.62:0,30,407	0/0:12,0:12:36.12:0,36,494	0/0:25,0:25:66.22:0,66,931	0/0:12,0:12:31.46:0,31,415	0/0:5,0:5:15.05:0,15,210
chr10	96374839	.	A	AAGG	13528.74	PASS	AC=46;AF=0.852;AN=54;BaseQRankSum=1.863;DP=508;FS=20.611;HRun=0;HaplotypeScore=127.8757;InbreedingCoeff=0.8790;MQ=69.79;MQ0=10;MQRankSum=-0.630;QD=41.63;ReadPosRankSum=5.980;VQSLOD=4.0707;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,7:13:24.01:420,24,0	./.	0/0:58,0:29:12.16:0,12,276	0/0:86,0:35:4.37:0,4,382	1/1:3,19:22:47.92:965,48,0	1/1:5,12:16:33.11:677,33,0	1/1:3,19:22:51.07:1066,51,0	0/0:28,0:28:57.09:0,57,755	1/1:4,11:13:27.09:568,27,0	1/1:1,13:14:36.06:663,36,0	1/1:2,5:8:15.05:315,15,0	1/1:2,12:14:33.11:670,33,0	1/1:4,15:19:45.15:939,45,0	1/1:2,3:5:9.03:177,9,0	1/1:4,11:15:27.09:550,27,0	1/1:1,10:11:21.07:440,21,0	1/1:7,8:15:24.02:446,24,0	1/1:6,7:13:13.06:498,13,0	1/1:1,4:4:9.03:187,9,0	1/1:0,11:11:27.09:551,27,0	1/1:2,13:14:21.07:442,21,0	1/1:0,7:7:9.03:189,9,0	1/1:3,11:14:30.10:622,30,0	1/1:2,14:16:30.10:631,30,0	1/1:2,13:15:39.13:804,39,0	1/1:2,20:22:63.20:1250,63,0	1/1:6,8:14:26.71:458,27,0	0/0:5,0:5:12.04:0,12,179
chr10	96374879	.	AGAG	A	141.21	PASS	AB=0.954;AC=8;AF=0.148;AN=54;BaseQRankSum=-0.367;DP=418;FS=0.755;HRun=0;HaplotypeScore=114.2142;InbreedingCoeff=0.0596;MQ=43.38;MQ0=35;MQRankSum=-6.714;QD=1.16;ReadPosRankSum=-1.507;VQSLOD=1.4507;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:13:1.62:2,0,165	0/0:2,0:1:3.01:0,3,58	./.	0/0:15,0:2:2.04:0,2,6	0/0:18,0:17:42.13:0,42,783	0/1:15,2:14:32.54:33,0,473	0/0:23,0:20:54.14:0,54,993	0/0:25,0:20:53.84:0,54,624	0/0:16,0:15:24.82:0,25,518	0/1:25,0:22:22.57:23,0,852	0/0:12,0:12:0.87:0,1,338	0/1:18,3:20:43.60:44,0,771	0/0:20,1:20:51.01:0,51,954	0/1:9,0:9:18.91:19,0,225	0/0:11,0:10:21.07:0,21,421	0/0:16,0:14:29.44:0,29,244	1/1:14,0:13:9.75:137,10,0	0/1:15,0:13:12.62:13,0,119	0/0:6,0:5:12.04:0,12,260	0/0:8,0:8:21.05:0,21,361	0/0:16,0:12:30.09:0,30,525	0/0:16,1:16:8.99:0,9,291	0/0:13,0:12:22.68:0,23,523	0/0:14,0:11:27.04:0,27,479	0/0:13,0:11:33.11:0,33,710	0/0:23,0:21:60.18:0,60,1210	0/0:11,0:10:9.15:0,9,454	0/0:5,0:4:5.35:0,5,29
chr10	96375305	.	A	ACGTT	36195.87	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=5.949;DP=704;FS=24.677;HRun=0;HaplotypeScore=169.8950;InbreedingCoeff=0.9980;MQ=68.94;MQ0=0;MQRankSum=-8.904;QD=58.29;ReadPosRankSum=2.229;VQSLOD=4.1923;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,21:33:63.16:1602,63,0	1/1:2,11:14:33.07:857,33,0	0/0:17,0:17:40.93:0,41,664	0/0:13,0:13:24:0,24,346	1/1:8,10:18:29.93:709,30,0	1/1:6,21:30:72.25:1944,72,0	1/1:11,22:36:87.25:2228,87,0	0/0:31,0:30:72.24:0,72,1399	1/1:6,18:24:66.23:1773,66,0	1/1:11,20:31:75.26:2024,75,0	1/1:3,3:9:21.46:439,21,0	1/1:10,25:38:96.24:2416,96,0	1/1:5,26:32:90.31:2412,90,0	1/1:3,17:21:48.16:1280,48,0	1/1:5,21:27:63.22:1664,63,0	1/1:3,20:25:60.21:1675,60,0	1/1:4,17:23:57.19:1487,57,0	1/1:4,15:20:48.16:1329,48,0	1/1:8,6:17:42.14:1004,42,0	1/1:2,10:14:36.09:860,36,0	1/1:10,28:42:56.23:1412,56,0	1/1:5,12:21:36.08:877,36,0	1/1:5,12:19:42:980,42,0	1/1:7,44:52:99:2851,105,0	1/1:6,12:20:38.92:909,39,0	1/1:8,15:25:60.19:1492,60,0	1/1:4,23:28:75.22:1972,75,0	0/0:22,0:22:63.22:0,63,1258
chr10	96375459	.	GGAGCTACACA	G	4130.83	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.726;DP=596;FS=1.201;HRun=0;HaplotypeScore=186.3093;InbreedingCoeff=0.9874;MQ=63.01;MQ0=1;MQRankSum=-9.967;QD=75.11;ReadPosRankSum=-0.016;VQSLOD=3.1734;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,9:15:30.10:906,30,0	0/0:12,0:12:36.12:0,36,1728	0/0:30,0:16:10.77:0,11,842	0/0:34,0:22:24.49:0,24,1443	0/0:15,0:15:45.15:0,45,2274	0/0:15,0:15:39.13:0,39,1870	0/0:30,0:30:84.27:0,84,4004	0/0:24,0:24:63.19:0,63,2812	0/0:22,0:22:54.19:0,54,2790	0/0:23,0:23:66.23:0,66,3347	0/0:15,0:15:42.14:0,42,2225	0/0:31,0:31:84.27:0,84,4159	0/0:20,0:20:54.19:0,54,2733	0/0:15,0:15:45.15:0,45,2296	0/0:26,0:26:75.26:0,75,3672	1/1:3,15:18:48.16:1516,48,0	1/1:2,10:12:33.11:1038,33,0	1/1:3,7:10:24.08:671,24,0	0/0:21,0:20:60.21:0,60,2919	0/0:21,0:21:63.22:0,63,3253	0/0:20,0:20:54.17:0,54,2502	0/0:30,0:30:87.29:0,87,4330	0/0:29,0:29:76.14:0,76,3663	0/0:30,0:30:72.25:0,72,3718	0/0:20,0:20:57.20:0,57,2911	0/0:22,0:22:66.23:0,66,3474	0/0:23,0:23:66.23:0,66,3280	0/0:13,0:13:39.13:0,39,2064
chr10	96375484	.	T	TCAAAA	3007.58	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=10.340;DP=703;FS=10.168;HRun=0;HaplotypeScore=171.2027;InbreedingCoeff=0.8577;MQ=63.48;MQ0=7;MQRankSum=-8.830;QD=21.64;ReadPosRankSum=-1.879;VQSLOD=2.0973;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,10:22:45.15:1143,45,0	0/0:9,0:9:21.07:0,21,373	0/0:43,0:19:12.69:0,13,357	0/1:71,0:41:33.63:34,0,423	0/0:19,0:19:48.16:0,48,871	0/0:16,0:16:39.10:0,39,637	0/0:34,0:34:55.97:0,56,1236	0/0:20,0:20:45.15:0,45,777	0/0:23,0:23:51.17:0,51,941	0/0:29,0:29:66.22:0,66,1192	0/0:21,0:21:54.17:0,54,949	0/0:34,0:34:66.22:0,66,1144	0/0:19,0:19:33.11:0,33,588	0/0:17,0:17:33.11:0,33,590	0/0:32,0:32:75.25:0,75,1353	1/1:10,10:20:36.12:939,36,0	1/1:11,5:16:30.10:718,30,0	1/1:8,2:10:18.05:338,18,0	0/0:23,0:22:27.07:0,27,432	0/0:28,0:28:72.25:0,72,1251	0/0:18,0:18:45.15:0,45,800	0/0:31,0:31:66.22:0,66,1153	0/0:33,0:33:68.95:0,69,1244	0/0:26,0:26:36.11:0,36,628	0/0:24,0:24:66.20:0,66,1135	0/0:28,0:28:69.24:0,69,1250	0/0:26,0:26:69.24:0,69,1260	0/0:11,0:11:33.11:0,33,618
chr10	96375527	.	C	CACAA	3933.11	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.490;DP=713;FS=0.509;HRun=0;HaplotypeScore=161.5264;InbreedingCoeff=0.9571;MQ=62.67;MQ0=4;MQRankSum=-6.397;QD=46.27;ReadPosRankSum=-0.569;VQSLOD=3.9110;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,16:26:42.14:1009,42,0	0/0:8,0:8:18.06:0,18,291	0/0:43,0:31:36.61:0,37,778	0/0:47,0:35:47.02:0,47,709	0/0:24,0:24:63.22:0,63,1079	0/0:13,0:13:33.57:0,34,161	0/0:26,0:26:47.98:0,48,245	0/0:33,0:33:69.19:0,69,1045	0/0:21,0:21:53.51:0,54,279	0/0:34,0:34:78.54:0,79,384	0/0:17,0:17:39.58:0,40,213	0/0:30,0:30:67.13:0,67,320	0/0:23,0:23:46.67:0,47,235	0/0:15,0:15:33.55:0,34,161	0/0:31,0:31:78.25:0,78,1306	1/1:6,20:30:66.16:1506,66,0	1/1:6,13:19:42.14:993,42,0	1/1:5,5:10:4.33:425,4,0	0/0:16,0:15:36.10:0,36,546	0/0:28,0:28:66.23:0,66,1129	0/0:24,0:24:63.14:0,63,970	0/0:27,0:27:58.96:0,59,296	0/0:33,0:33:67.02:0,67,332	0/0:26,0:26:69.95:0,70,335	0/0:27,0:27:63.19:0,63,1052	0/0:33,0:33:90.23:0,90,1432	0/0:28,0:28:78.21:0,78,1230	0/0:19,0:20:42.13:0,42,672
chr10	96375537	.	C	CA	9010.59	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-8.760;DP=716;FS=0.950;HRun=6;HaplotypeScore=96.8656;InbreedingCoeff=0.7681;MQ=66.90;MQ0=2;MQRankSum=-0.228;QD=24.62;ReadPosRankSum=5.517;VQSLOD=4.3633;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:2.35:76,2,0	0/0:7,0:7:21.03:0,21,207	0/0:37,0:27:55.05:0,55,614	0/0:37,0:31:59.39:0,59,572	0/0:25,0:25:72.16:0,72,734	1/1:1,14:15:36.12:453,36,0	1/1:6,22:28:56.67:685,57,0	0/0:33,0:33:84.11:0,84,824	1/1:3,20:23:54.17:679,54,0	1/1:2,32:34:93.28:1154,93,0	1/1:3,15:18:37:455,37,0	1/1:0,31:31:84.27:1057,84,0	1/1:1,21:22:60.19:755,60,0	1/1:1,18:19:48.15:603,48,0	0/0:33,0:33:96.20:0,96,972	0/1:31,0:31:10.77:111,0,11	0/1:19,0:19:46.04:100,0,46	0/1:9,0:9:12.05:51,0,12	0/0:19,0:18:36.07:0,36,364	0/0:26,0:26:75.15:0,75,758	0/0:27,0:27:75.16:0,75,759	1/1:3,25:28:69.22:867,69,0	1/1:5,30:35:76.13:945,76,0	1/1:0,29:29:81.26:1019,81,0	0/0:26,0:26:69.15:0,69,703	0/0:35,0:35:96.21:0,96,973	0/0:28,0:28:78.17:0,78,796	0/0:15,0:15:41.76:0,42,409
chr10	96376082	.	A	AAACC	2187.87	PASS	AB=0.565;AC=7;AF=0.125;AN=56;BaseQRankSum=0.883;DP=340;FS=30.700;HRun=0;HaplotypeScore=73.4193;InbreedingCoeff=0.7710;MQ=89.00;MQ0=4;MQRankSum=-8.446;QD=42.07;ReadPosRankSum=0.648;VQSLOD=1.3547;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,12:15:27.09:648,27,0	0/0:5,0:5:15.05:0,15,276	0/0:24,0:24:57.18:0,57,971	0/0:20,0:19:48.16:0,48,829	0/0:7,0:7:11.86:0,12,201	0/0:12,0:12:27.09:0,27,497	0/0:21,0:21:54.19:0,54,985	0/0:20,0:20:48.16:0,48,881	0/0:9,0:9:24.08:0,24,442	0/0:12,0:12:36.11:0,36,631	0/0:9,0:9:24.08:0,24,425	0/0:13,0:13:33.11:0,33,604	0/0:11,0:11:33.11:0,33,597	0/0:16,0:15:35.86:0,36,658	0/0:10,0:10:27.09:0,27,495	0/1:3,10:13:22.10:755,0,22	1/1:4,8:12:21.07:536,21,0	1/1:4,8:12:15.05:395,15,0	0/0:4,0:4:9.03:0,9,166	0/0:7,0:7:12.04:0,12,219	0/0:14,0:14:33.11:0,33,582	0/0:11,0:11:30.10:0,30,552	0/0:7,0:6:18.06:0,18,320	0/0:24,0:22:57.12:0,57,978	0/0:5,0:5:9.03:0,9,144	0/0:11,0:11:33.11:0,33,594	0/0:11,0:11:24.08:0,24,421	0/0:5,0:5:15.05:0,15,276
chr10	96376130	.	T	TG	237.41	PASS	AB=0.870;AC=4;AF=0.087;AN=46;BaseQRankSum=-0.562;DP=200;FS=1.700;HRun=1;HaplotypeScore=35.5888;InbreedingCoeff=0.1874;MQ=38.89;MQ0=42;MQRankSum=-0.340;QD=7.66;ReadPosRankSum=-1.109;VQSLOD=0.2779;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:4:0:0,0,0	0/0:1,0:1:2.99:0,3,24	0/0:7,0:3:6.02:0,6,76	0/0:10,0:2:0:0,0,0	0/0:7,0:3:3.01:0,3,39	0/0:10,0:9:15.05:0,15,190	0/0:17,0:15:15.39:0,15,188	0/1:13,7:13:47.07:282,0,47	0/0:9,0:8:2.08:0,2,36	0/0:8,0:5:12.03:0,12,142	0/0:6,0:5:6.02:0,6,76	0/0:9,0:7:4.59:0,5,74	0/0:8,0:6:15.04:0,15,181	0/0:14,0:12:11.95:0,12,117	./.	0/0:12,0:12:4.94:0,5,74	./.	0/0:7,0:6:8.75:0,9,115	0/0:1,0:1:2.97:0,3,20	./.	./.	0/0:4,0:4:4.26:0,4,42	0/0:8,0:6:6.02:0,6,76	0/0:11,0:9:8.84:0,9,114	./.	0/0:5,0:3:6.02:0,6,74	0/0:2,0:2:5.94:0,6,41	1/1:4,0:2:4.26:43,4,0
chr10	96376160	.	TG	T	222.42	PASS	AB=0.600;AC=19;AF=0.864;AN=22;BaseQRankSum=1.827;DP=105;FS=0.000;HRun=2;HaplotypeScore=17.2443;InbreedingCoeff=0.1327;MQ=28.09;MQ0=34;MQRankSum=-0.315;QD=3.90;ReadPosRankSum=0.063;VQSLOD=0.1196;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/0:5,0:1:0.89:0,1,2	1/1:0,5:4:3.01:38,3,0	1/1:3,9:10:3.48:40,3,0	1/1:8,2:5:3.75:34,4,0	./.	1/1:4,2:3:6.02:77,6,0	./.	1/1:2,4:4:0.89:2,1,0	1/1:1,2:2:2.74:12,3,0	./.	./.	1/1:4,2:6:0.40:1,0,0	./.	0/1:1,2:3:0.39:34,0,0	./.	./.	./.	./.	./.	./.	./.	1/1:4,0:1:2.96:19,3,0	./.	1/1:1,1:1:3.01:38,3,0
chr10	96376552	.	GTAA	G	792.18	PASS	AB=0.722;AC=21;AF=0.525;AN=40;BaseQRankSum=1.674;DP=143;FS=0.000;HRun=0;HaplotypeScore=22.2593;InbreedingCoeff=0.3426;MQ=22.06;MQ0=52;MQRankSum=0.952;QD=9.11;ReadPosRankSum=0.624;VQSLOD=1.5997;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,8:12:2.37:9,2,0	./.	./.	./.	./.	1/1:6,3:7:8.78:85,9,0	1/1:6,5:7:8.35:78,8,0	0/1:4,4:6:23.81:139,0,24	0/0:3,0:3:1.55:0,2,4	1/1:0,3:3:9.03:152,9,0	0/1:4,1:3:0:0,0,0	0/0:3,0:1:0:0,0,0	./.	0/0:4,0:1:0.47:0,0,1	./.	0/0:3,1:3:0.33:0,0,1	0/0:5,1:3:0.64:0,1,1	0/0:4,0:1:1.25:0,1,3	1/1:1,3:3:9.03:157,9,0	0/0:3,1:2:0.47:0,0,1	0/1:4,0:4:0:0,0,0	1/1:2,1:1:1.55:4,2,0	./.	0/0:9,1:3:0:0,0,0	1/1:4,0:2:5.81:64,6,0	1/1:9,1:6:5.98:72,6,0	1/1:2,2:3:8.99:122,9,0	./.
chr10	96376554	.	A	AG	678.14	PASS	AB=0.986;AC=29;AF=0.630;AN=46;BaseQRankSum=-0.388;DP=175;FS=0.000;HRun=0;HaplotypeScore=57.2923;InbreedingCoeff=0.3616;MQ=23.27;MQ0=53;MQRankSum=-0.776;QD=4.58;ReadPosRankSum=1.487;VQSLOD=3.0371;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:11:0:0,0,0	0/0:3,0:1:0.47:0,0,1	./.	./.	0/1:6,1:4:0.19:0,0,0	1/1:8,4:9:6.49:84,6,0	1/1:12,1:10:3.69:36,4,0	0/1:8,0:6:4.27:93,0,4	0/0:2,2:4:0.80:0,1,2	1/1:8,0:7:15.49:159,15,0	1/1:4,1:3:0.31:0,0,0	0/1:6,0:4:0.16:1,0,0	0/1:4,0:1:0:0,0,0	0/1:6,0:3:0.01:0,0,0	0/0:6,2:4:0:0,0,0	0/1:3,0:2:0:0,0,0	1/1:5,0:2:0.08:1,0,0	./.	1/1:5,0:3:9.03:103,9,0	0/0:5,2:5:2.64:0,3,9	0/1:9,0:5:0.02:0,0,0	1/1:4,0:2:0.94:3,1,0	./.	0/1:12,0:5:0:0,0,0	1/1:4,2:4:3.48:37,3,0	1/1:8,5:9:10.85:101,11,0	1/1:5,1:4:12.02:143,12,0	./.
chr10	96377028	.	C	CA	668.57	PASS	AB=0.950;AC=34;AF=0.654;AN=52;BaseQRankSum=5.412;DP=232;FS=8.520;HRun=8;HaplotypeScore=75.9616;InbreedingCoeff=0.5284;MQ=39.30;MQ0=14;MQRankSum=-4.575;QD=5.39;ReadPosRankSum=-0.847;VQSLOD=0.1985;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:7:3.72:0,4,22	1/1:7,1:7:7.14:40,7,0	./.	./.	0/1:8,1:9:7.67:18,0,8	1/1:12,1:11:23.39:184,23,0	1/1:5,1:6:6.02:66,6,0	0/0:26,0:25:71.90:0,72,629	1/1:4,1:5:9.27:69,9,0	0/0:9,1:7:3.64:0,4,18	1/1:5,1:6:3.89:35,4,0	1/1:2,0:2:2.99:24,3,0	0/1:9,0:8:0:0,0,0	1/1:4,1:5:3.89:34,4,0	0/0:7,0:6:3.37:0,3,17	0/0:10,0:10:8.37:0,8,41	0/0:17,0:14:17.69:0,18,129	0/0:8,0:6:8.43:0,8,51	1/1:7,0:7:3.35:26,3,0	1/1:8,0:7:2.74:12,3,0	1/1:3,0:3:0.47:1,0,0	1/1:2,3:5:12.02:124,12,0	1/1:7,1:6:4.25:36,4,0	1/1:2,1:3:3.01:32,3,0	1/1:10,0:11:14.88:69,15,0	1/1:9,0:8:4.55:30,5,0	1/1:7,0:6:6.42:30,6,0	0/0:11,0:11:23.06:0,23,117
chr10	96377033	.	AAAAT	A	539.84	PASS	AB=1.000;AC=26;AF=0.619;AN=42;BaseQRankSum=1.024;DP=197;FS=8.425;HRun=0;HaplotypeScore=73.5689;InbreedingCoeff=0.4533;MQ=35.92;MQ0=13;MQRankSum=-0.029;QD=4.57;ReadPosRankSum=1.904;VQSLOD=0.6122;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:5:3:28,3,0	0/0:5,0:4:9:0,9,81	./.	./.	1/1:8,0:8:2.04:6,2,0	1/1:13,0:11:15.06:107,15,0	1/1:4,0:4:4.74:15,5,0	1/1:26,0:25:8.93:65,9,0	1/1:5,0:5:3:26,3,0	./.	./.	./.	./.	1/1:4,0:4:2.04:6,2,0	0/0:6,0:5:1.25:0,1,3	1/1:9,0:9:3:28,3,0	0/0:15,0:12:4.71:0,5,18	1/1:7,0:5:3:28,3,0	0/1:9,0:9:1.34:1,0,21	0/0:2,0:1:3:0,3,26	0/0:2,0:2:3:0,3,28	1/1:4,0:4:5.22:32,5,0	1/1:6,0:4:2.37:8,2,0	./.	0/0:10,0:10:13.68:0,14,111	0/1:7,0:6:2.82:3,0,43	0/0:6,0:5:11.97:0,12,98	1/1:2,8:10:21.07:323,21,0
chr10	96377036	.	AT	A	830.35	PASS	AB=0.893;AC=35;AF=0.673;AN=52;BaseQRankSum=3.771;DP=174;FS=11.206;HRun=1;HaplotypeScore=61.4759;InbreedingCoeff=0.2103;MQ=33.73;MQ0=7;MQRankSum=-4.285;QD=7.28;ReadPosRankSum=0.699;VQSLOD=-0.4224;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:5:3.43:18,0,3	0/1:4,0:4:7.23:12,0,7	./.	./.	1/1:2,5:7:8.05:40,8,0	1/1:4,7:9:22.87:152,23,0	1/1:3,1:4:5.75:30,6,0	0/0:28,0:27:34.18:0,34,734	1/1:3,2:5:11.80:103,12,0	0/0:6,0:5:0.38:0,0,4	1/1:3,0:3:5.80:32,6,0	1/1:1,0:1:2.04:6,2,0	0/1:3,0:2:0.41:0,0,0	1/1:3,0:3:5.84:40,6,0	1/1:2,3:4:8.73:68,9,0	1/1:6,1:7:0.35:56,0,0	0/0:13,1:11:13.15:0,13,103	0/1:5,1:4:5.10:41,0,5	1/1:6,3:9:13.09:122,13,0	0/0:1,1:1:2.37:0,2,8	0/0:2,0:2:0.46:0,0,1	1/1:3,1:4:11.59:68,12,0	1/1:4,1:3:6.34:25,6,0	1/1:2,0:2:2.49:9,2,0	0/1:7,3:10:4.06:44,0,4	1/1:3,2:4:0.74:38,1,0	0/1:2,3:4:4.02:31,0,4	0/1:10,0:10:18.89:28,0,19
chr10	96377037	.	T	TA	1029.73	PASS	AB=0.903;AC=35;AF=0.673;AN=52;BaseQRankSum=4.175;DP=173;FS=14.148;HRun=8;HaplotypeScore=60.8196;InbreedingCoeff=0.4852;MQ=33.40;MQ0=7;MQRankSum=-4.922;QD=11.57;ReadPosRankSum=1.035;VQSLOD=1.1554;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:5.44:0,5,31	1/1:2,2:4:5.72:76,6,0	./.	./.	0/1:6,1:7:9.83:10,0,13	1/1:11,0:9:20.36:162,20,0	1/1:4,0:4:6.02:67,6,0	0/0:28,0:27:29.49:0,29,701	1/1:4,0:4:4.80:44,5,0	0/0:6,0:5:2.63:0,3,17	1/1:3,0:3:3.89:35,4,0	1/1:1,0:1:2.99:24,3,0	0/1:3,0:2:0:0,0,0	1/1:3,0:3:3.01:31,3,0	0/1:4,1:4:11.01:23,0,11	0/0:7,0:7:11.48:0,11,54	0/0:14,0:11:17.70:0,18,145	0/0:6,0:4:9.75:0,10,59	1/1:6,3:9:5.80:103,6,0	1/1:1,1:1:3.01:38,3,0	1/1:1,1:2:3.01:33,3,0	1/1:4,0:4:12.02:124,12,0	1/1:5,0:3:4.25:36,4,0	1/1:2,0:2:3.01:32,3,0	1/1:6,4:10:20.51:172,21,0	1/1:3,2:4:9.02:99,9,0	1/1:3,2:4:8.51:85,9,0	0/0:10,0:10:23.11:0,23,121
chr10	96377039	.	AAT	A	534.58	PASS	AB=1.000;AC=34;AF=0.654;AN=52;BaseQRankSum=4.135;DP=171;FS=1.676;HRun=0;HaplotypeScore=64.7597;InbreedingCoeff=0.2422;MQ=33.06;MQ0=7;MQRankSum=-3.465;QD=5.35;ReadPosRankSum=2.616;VQSLOD=2.5277;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:5:6.28:6,0,17	1/1:4,0:4:0.46:9,0,0	./.	./.	0/1:7,0:7:4.38:55,0,4	1/1:4,6:8:19.21:111,19,0	1/1:3,1:4:5.54:25,6,0	0/0:28,0:27:74.92:0,75,892	1/1:3,1:4:3.95:29,4,0	0/0:6,0:5:2.46:0,2,18	1/1:3,0:3:3.99:15,4,0	1/1:1,0:1:1.82:5,2,0	0/1:3,0:2:0:0,0,0	1/1:2,0:2:2.68:11,3,0	0/1:5,0:4:5.36:34,0,5	0/0:7,0:7:2.47:0,2,44	0/0:14,0:11:17.74:0,18,162	0/0:6,0:4:2.47:0,2,31	1/1:9,0:9:11.24:133,11,0	0/0:2,0:1:1.55:0,2,4	1/1:2,0:2:2.04:6,2,0	1/1:3,1:4:11.32:58,11,0	1/1:4,1:3:4.61:17,5,0	1/1:2,0:2:2.74:12,3,0	0/1:10,0:10:3.85:78,0,4	1/1:4,1:4:3.99:28,4,0	1/1:5,0:4:2.82:27,3,0	0/1:10,0:10:15.96:16,0,28
chr10	96377040	.	AT	A	641.28	PASS	AB=1.000;AC=39;AF=0.780;AN=50;BaseQRankSum=6.730;DP=153;FS=1.702;HRun=1;HaplotypeScore=61.7006;InbreedingCoeff=0.4249;MQ=33.55;MQ0=7;MQRankSum=-5.490;QD=7.13;ReadPosRankSum=1.595;VQSLOD=0.8457;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:5:1.20:1,0,18	1/1:4,0:4:7.43:37,7,0	./.	./.	1/1:6,1:7:7.20:32,7,0	1/1:8,1:8:18.22:93,18,0	1/1:2,0:2:5.19:20,5,0	0/0:28,0:27:78.01:0,78,962	1/1:3,0:3:8.33:42,8,0	0/0:3,0:2:2.69:0,3,18	1/1:1,0:1:2.68:11,3,0	1/1:1,0:1:0.89:2,1,0	./.	1/1:1,0:1:2.68:11,3,0	1/1:5,0:4:8.91:75,9,0	0/1:6,0:6:16.38:17,0,16	0/0:13,0:10:17.09:0,17,157	0/1:6,0:4:13.20:13,0,26	1/1:8,1:9:21.48:158,21,0	1/1:2,0:1:2.04:6,2,0	1/1:1,0:1:0.89:2,1,0	1/1:4,0:4:10.90:49,11,0	1/1:2,0:1:2.60:10,3,0	1/1:1,1:2:1.25:3,1,0	1/1:9,1:10:20.70:96,21,0	1/1:5,0:4:9.88:54,10,0	1/1:3,2:4:10.39:55,10,0	0/0:10,0:10:9.15:0,9,56
chr10	96377041	.	T	TA	622.43	PASS	AB=0.875;AC=35;AF=0.729;AN=48;BaseQRankSum=3.976;DP=150;FS=19.691;HRun=3;HaplotypeScore=59.3562;InbreedingCoeff=0.5054;MQ=32.92;MQ0=7;MQRankSum=-3.163;QD=8.53;ReadPosRankSum=2.290;VQSLOD=-0.2412;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:5.47:0,5,29	1/1:2,3:5:7.47:66,7,0	./.	./.	0/1:6,1:7:2.18:26,0,2	1/1:8,0:8:4.15:33,4,0	1/1:2,0:2:5.67:28,6,0	0/0:27,0:26:75.11:0,75,847	1/1:3,0:3:1.17:11,1,0	./.	1/1:1,0:1:2.92:17,3,0	1/1:1,0:1:2.88:15,3,0	./.	1/1:1,0:1:2.68:11,3,0	1/1:4,1:4:0.46:19,0,0	0/0:6,0:6:10.58:0,11,49	0/0:12,0:9:11.93:0,12,109	0/0:6,0:4:11.02:0,11,55	1/1:7,2:9:8.20:91,8,0	1/1:1,1:1:3.01:30,3,0	1/1:0,1:1:3.01:33,3,0	1/1:4,0:4:10.42:49,10,0	1/1:2,0:1:2.84:14,3,0	1/1:2,0:2:2.88:15,3,0	1/1:6,4:10:17.70:155,18,0	1/1:3,2:4:7.57:69,8,0	1/1:3,2:4:9.02:93,9,0	0/0:10,0:10:23.61:0,24,140
chr10	96377045	.	T	TA	691.92	PASS	AB=1.000;AC=34;AF=0.708;AN=48;BaseQRankSum=3.813;DP=138;FS=28.661;HRun=3;HaplotypeScore=59.6100;InbreedingCoeff=0.4137;MQ=32.11;MQ0=6;MQRankSum=-3.640;QD=9.10;ReadPosRankSum=0.700;VQSLOD=-0.2992;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:0.47:0,0,1	1/1:2,3:5:11.52:127,12,0	./.	./.	1/1:2,4:6:5.95:51,6,0	0/0:8,0:8:2.66:0,3,15	1/1:2,0:2:2.49:6,2,0	0/0:28,0:27:66.19:0,66,773	0/0:2,0:2:1.44:0,1,5	./.	1/1:1,0:1:1.25:3,1,0	0/0:1,0:1:1.25:0,1,3	./.	1/1:1,0:1:1.55:4,2,0	1/1:1,3:3:5.96:51,6,0	1/1:5,0:5:1.20:3,1,0	0/1:10,0:7:9.62:10,0,65	1/1:5,0:4:0.09:10,0,0	1/1:4,3:7:11.92:114,12,0	1/1:0,2:1:3.01:38,3,0	1/1:0,1:1:3.01:35,3,0	0/1:4,0:4:0.15:0,0,1	1/1:2,0:1:0.89:2,1,0	1/1:2,0:2:0.47:1,0,0	1/1:4,4:9:18.06:175,18,0	1/1:2,3:4:4.69:74,5,0	1/1:1,4:4:11.79:113,12,0	0/0:10,0:10:26.09:0,26,160
chr10	96377048	.	AT	A	331.47	PASS	AB=0.985;AC=28;AF=0.560;AN=50;BaseQRankSum=6.555;DP=127;FS=8.113;HRun=1;HaplotypeScore=58.3570;InbreedingCoeff=0.3531;MQ=32.47;MQ0=5;MQRankSum=-3.127;QD=5.10;ReadPosRankSum=1.029;VQSLOD=0.1159;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,1:3:2.10:19,2,0	0/1:4,0:4:6.08:6,0,36	./.	0/1:4,0:1:0:0,0,0	0/0:5,0:5:8.84:0,9,58	1/1:8,0:8:18.30:106,18,0	1/1:2,0:2:5.81:32,6,0	0/0:23,0:23:66.09:0,66,804	1/1:3,0:3:5.84:34,6,0	./.	1/1:2,0:2:4.20:22,4,0	1/1:2,0:2:2.60:10,3,0	./.	1/1:1,0:1:2.99:23,3,0	0/0:3,0:2:5.74:0,6,30	1/1:3,0:4:8.33:52,8,0	0/1:9,1:7:41.07:41,0,79	1/1:2,2:4:8.93:68,9,0	0/1:5,0:5:6.39:6,0,30	0/0:2,0:1:2.92:0,3,17	0/0:2,0:2:2.95:0,3,19	1/1:4,0:4:7.64:39,8,0	1/1:2,0:1:2.92:17,3,0	0/1:2,0:2:0:0,0,0	0/0:7,0:7:7.77:0,8,68	0/0:4,0:3:3.84:0,4,31	0/1:5,0:4:7.24:7,0,21	0/0:11,0:11:14.78:0,15,102
chr10	96377052	.	AT	A	414.40	PASS	AB=1.000;AC=30;AF=0.556;AN=54;BaseQRankSum=7.867;DP=128;FS=0.000;HRun=1;HaplotypeScore=60.2363;InbreedingCoeff=0.4054;MQ=33.87;MQ0=5;MQRankSum=-4.301;QD=6.28;ReadPosRankSum=-0.913;VQSLOD=0.0703;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,1:3:2.05:16,2,0	0/0:4,0:4:11.77:0,12,143	./.	0/0:5,0:2:2.69:0,3,13	0/0:3,0:3:5.89:0,6,86	1/1:2,6:8:20.37:111,20,0	1/1:1,1:2:5.83:33,6,0	0/0:22,0:22:66.06:0,66,784	1/1:4,1:5:5.83:34,6,0	1/1:1,0:1:2.94:18,3,0	1/1:2,0:2:2.96:19,3,0	1/1:3,0:3:5.64:27,6,0	1/1:4,0:3:7.77:31,8,0	1/1:2,0:2:5.03:29,5,0	0/0:2,0:1:3.01:0,3,41	1/1:4,0:4:8.17:39,8,0	0/1:11,0:9:59.84:60,0,75	1/1:4,1:5:11.67:88,12,0	0/1:6,0:6:6.05:6,0,127	0/0:1,0:1:3.01:0,3,45	0/0:2,0:2:6.02:0,6,83	1/1:1,1:2:5.87:35,6,0	1/1:0,1:1:2.92:17,3,0	0/1:2,0:2:0:0,0,0	0/0:6,0:6:8.19:0,8,205	0/0:4,0:3:1.75:0,2,84	0/1:5,0:4:16.48:16,0,77	0/0:10,0:10:11.81:0,12,96
chr10	96377055	.	AAT	A	316.72	PASS	AB=1.000;AC=32;AF=0.593;AN=54;BaseQRankSum=7.106;DP=166;FS=4.083;HRun=0;HaplotypeScore=92.2443;InbreedingCoeff=0.3228;MQ=33.21;MQ0=3;MQRankSum=-4.167;QD=2.71;ReadPosRankSum=-0.621;VQSLOD=1.6312;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:13:7.38:41,7,0	0/0:4,0:4:12:0,12,174	./.	0/0:3,0:2:2.90:0,3,42	0/0:3,0:3:6.02:0,6,83	1/1:6,6:11:17.46:95,17,0	1/1:2,1:3:1.41:3,1,0	0/0:21,0:21:63.01:0,63,759	1/1:4,1:5:2.97:20,3,0	1/1:5,0:5:1.08:3,1,0	1/1:3,0:3:1.57:14,2,0	1/1:5,0:5:5.72:28,6,0	1/1:5,0:4:2.01:14,2,0	1/1:4,0:4:3.52:13,4,0	0/0:3,0:2:6.02:0,6,83	1/1:6,0:6:6.33:37,6,0	0/1:11,0:9:16.17:16,0,88	1/1:12,0:12:17.98:105,18,0	0/1:6,0:6:19.24:19,0,161	0/0:1,0:1:3.01:0,3,56	0/0:2,0:2:6.02:0,6,98	1/1:2,1:3:3.27:20,3,0	1/1:4,1:5:1.43:3,1,0	1/1:4,0:4:4.97:18,5,0	0/0:6,0:6:8.27:0,8,242	0/0:4,0:3:5.29:0,5,111	0/1:5,0:4:14.03:14,0,101	0/1:10,0:10:12.27:12,0,67
chr10	96377064	.	AT	A	605.11	PASS	AB=0.986;AC=27;AF=0.500;AN=54;BaseQRankSum=9.936;DP=188;FS=0.635;HRun=1;HaplotypeScore=100.9801;InbreedingCoeff=0.4590;MQ=39.67;MQ0=2;MQRankSum=-5.350;QD=5.71;ReadPosRankSum=-1.625;VQSLOD=-0.1296;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:9.73:0,10,91	0/0:5,0:5:15.02:0,15,198	./.	0/0:3,0:3:2.90:0,3,42	0/0:3,0:3:9.03:0,9,129	1/1:6,7:12:28:188,28,0	1/1:2,2:4:8.51:78,9,0	0/0:26,0:26:77.02:0,77,881	1/1:5,2:7:7.23:60,7,0	1/1:8,0:7:8.99:32,9,0	1/1:6,0:6:6.97:28,7,0	1/1:6,0:6:9.29:26,9,0	1/1:7,0:6:8.58:26,9,0	1/1:4,0:4:4.26:36,4,0	0/0:3,0:2:6.02:0,6,83	0/1:3,0:3:0.82:1,0,25	0/1:11,0:10:19.60:46,0,20	0/1:12,1:13:17.97:79,0,18	0/0:7,0:7:21.06:0,21,280	0/0:1,0:1:3.01:0,3,46	0/0:2,0:2:6.02:0,6,87	1/1:1,2:3:7.24:60,7,0	1/1:7,1:8:10.47:53,10,0	1/1:5,0:5:8.89:40,9,0	0/0:6,0:6:12.23:0,12,219	0/1:3,0:3:11.77:12,0,82	0/1:4,0:4:23.16:23,0,79	0/0:10,0:10:12.22:0,12,96
chr10	96377068	.	AT	A	1114.80	PASS	AB=1.000;AC=28;AF=0.519;AN=54;BaseQRankSum=9.196;DP=195;FS=11.303;HRun=1;HaplotypeScore=100.5338;InbreedingCoeff=0.7754;MQ=43.38;MQ0=2;MQRankSum=-3.914;QD=10.52;ReadPosRankSum=-0.883;VQSLOD=0.3316;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:8.78:0,9,129	0/0:5,0:5:15.05:0,15,218	./.	0/0:3,0:4:6.76:0,7,64	0/0:3,0:3:9.03:0,9,129	1/1:13,0:12:35.41:251,35,0	1/1:4,0:4:11.93:90,12,0	0/0:26,0:26:72.11:0,72,867	1/1:8,0:8:8.86:60,9,0	1/1:9,0:8:19.18:128,19,0	1/1:5,1:6:11.38:67,11,0	1/1:6,0:6:14.72:94,15,0	1/1:6,1:6:16.05:88,16,0	1/1:5,0:4:10.43:52,10,0	0/0:3,0:2:6.02:0,6,83	0/1:3,0:3:0.16:0,0,35	1/1:10,1:10:20.17:118,20,0	1/1:9,5:14:17.59:122,18,0	0/0:7,0:7:21.07:0,21,289	0/0:1,0:1:3.01:0,3,46	0/0:3,0:3:9.03:0,9,128	1/1:3,0:3:8.92:64,9,0	1/1:9,0:9:17.83:125,18,0	1/1:5,0:5:7.94:55,8,0	0/0:6,0:6:18.06:0,18,244	0/1:3,0:3:1.82:2,0,83	0/0:5,0:5:11.19:0,11,118	0/0:10,0:10:12.22:0,12,96
chr10	96377070	.	AAATAAAT	A	1687.27	PASS	AB=1.000;AC=29;AF=0.537;AN=54;BaseQRankSum=9.492;DP=204;FS=0.000;HRun=0;HaplotypeScore=121.9310;InbreedingCoeff=0.5395;MQ=47.17;MQ0=1;MQRankSum=-5.203;QD=12.98;ReadPosRankSum=-0.578;VQSLOD=2.2257;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:72.88:73,0,77	0/0:5,0:5:15.04:0,15,327	./.	0/1:5,0:5:9.03:9,0,26	0/0:3,0:3:8.81:0,9,78	1/1:9,4:12:35.68:432,36,0	1/1:4,0:4:11.92:97,12,0	0/0:26,0:26:63.08:0,63,688	1/1:7,1:8:8.79:102,9,0	1/1:9,0:8:11.37:115,11,0	1/1:6,0:6:9.75:60,10,0	1/1:6,0:6:14.76:97,15,0	1/1:7,0:6:17.66:109,18,0	1/1:5,0:4:10.20:53,10,0	0/0:3,0:3:9.03:0,9,126	0/1:4,0:4:27.61:47,0,28	0/1:11,0:11:28.25:97,0,28	1/1:15,0:14:30.15:282,30,0	0/0:7,0:7:21.05:0,21,276	0/0:1,0:1:3.01:0,3,86	0/0:3,0:3:9.03:0,9,154	1/1:2,1:3:8.96:115,9,0	1/1:9,0:9:17.82:133,18,0	1/1:5,0:5:7.24:58,7,0	0/0:7,0:7:20.98:0,21,416	0/1:4,0:4:5.83:6,0,195	0/0:5,0:5:15.05:0,15,296	0/0:11,0:11:29.82:0,30,241
chr10	96377072	.	AT	A	1156.98	PASS	AB=0.964;AC=28;AF=0.519;AN=54;BaseQRankSum=9.086;DP=203;FS=5.736;HRun=1;HaplotypeScore=100.5673;InbreedingCoeff=0.6026;MQ=47.34;MQ0=1;MQRankSum=-4.960;QD=9.26;ReadPosRankSum=-0.108;VQSLOD=0.9361;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,1:16:30.99:31,0,66	0/0:5,0:5:15.05:0,15,219	./.	0/0:4,0:5:2.10:0,2,69	0/0:3,0:3:9.03:0,9,120	1/1:11,2:12:35.21:237,35,0	1/1:4,1:5:11.88:81,12,0	0/0:24,0:24:66.05:0,66,782	1/1:7,0:7:5.81:34,6,0	1/1:9,0:8:16.13:123,16,0	1/1:5,1:6:11.22:63,11,0	1/1:6,0:6:14.74:95,15,0	1/1:6,1:6:16.68:94,17,0	1/1:5,0:4:10.92:58,11,0	0/0:3,0:3:9.03:0,9,125	0/1:4,0:4:15.68:32,0,16	0/1:10,1:11:8.88:73,0,9	1/1:9,6:14:24.52:181,25,0	0/0:7,0:7:21.06:0,21,280	0/0:1,0:1:3.01:0,3,45	0/0:3,0:3:9.03:0,9,129	1/1:3,0:3:8.83:57,9,0	1/1:8,1:9:17.80:121,18,0	1/1:5,0:5:11.73:72,12,0	0/0:8,0:8:24.01:0,24,279	0/1:4,0:4:2.69:3,0,121	0/0:5,0:5:14.69:0,15,163	0/0:11,0:11:14.78:0,15,116
chr10	96377076	.	A	AAG	1921.62	PASS	AB=0.807;AC=20;AF=0.370;AN=54;BaseQRankSum=5.537;DP=221;FS=17.883;HRun=0;HaplotypeScore=105.9764;InbreedingCoeff=0.5999;MQ=48.40;MQ0=1;MQRankSum=-4.050;QD=23.15;ReadPosRankSum=2.502;VQSLOD=2.9854;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:18:14.01:0,14,260	0/0:6,0:6:18.02:0,18,263	./.	0/1:6,0:6:5.90:6,0,96	0/0:3,0:3:9.03:0,9,146	1/1:7,6:12:1.13:283,1,0	0/1:3,2:5:15.12:98,0,15	0/0:25,0:25:19.85:0,20,757	1/1:6,1:7:5.99:77,6,0	1/1:2,6:8:8.91:331,9,0	1/1:2,4:6:12.04:193,12,0	1/1:3,4:7:15.05:252,15,0	1/1:3,4:6:18.03:257,18,0	0/1:3,2:4:0.73:111,0,1	0/0:3,0:3:9.03:0,9,146	0/0:6,0:6:14.87:0,15,115	0/0:13,0:13:4.80:0,5,113	0/0:12,0:15:15.15:0,15,168	0/0:10,0:10:24.05:0,24,342	0/0:1,0:1:3.01:0,3,49	0/0:4,0:4:12.03:0,12,173	0/1:3,1:4:1.14:75,0,1	1/1:3,6:9:5.45:253,5,0	1/1:0,4:5:11.87:167,12,0	0/0:8,0:8:23.97:0,24,355	0/0:4,0:4:11.40:0,11,155	0/0:5,0:5:15.02:0,15,186	0/0:13,0:13:35.94:0,36,355
chr10	96377086	.	AAAAG	A	1061.53	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=7.215;DP=287;FS=4.280;HRun=0;HaplotypeScore=120.4933;InbreedingCoeff=0.4027;MQ=58.92;MQ0=0;MQRankSum=-4.742;QD=9.23;ReadPosRankSum=3.485;VQSLOD=2.8203;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:29.86:0,30,341	0/0:8,0:8:24.07:0,24,473	0/0:13,0:9:14.78:0,15,203	0/0:8,0:7:12.50:0,13,214	0/0:5,0:5:14.97:0,15,308	1/1:13,3:15:30.74:316,31,0	0/1:9,0:9:49.30:49,0,96	0/0:24,0:24:57.06:0,57,1235	1/1:7,1:8:8.17:80,8,0	0/1:12,0:11:39.37:93,0,39	0/1:11,0:11:38.76:63,0,39	0/1:11,0:11:39.29:89,0,39	1/1:8,0:8:22.99:158,23,0	0/1:9,0:8:4.23:99,0,4	0/0:5,0:5:15.05:0,15,308	0/1:6,0:6:7.41:7,0,148	0/0:13,0:13:17.61:0,18,243	0/0:21,0:20:37.64:0,38,329	0/0:11,0:11:33.11:0,33,726	0/0:3,0:3:8.96:0,9,125	0/0:6,0:6:18.06:0,18,396	1/1:3,1:4:11.50:101,11,0	1/1:12,0:12:17.71:114,18,0	0/1:9,0:9:63.09:75,0,63	0/0:8,0:9:23.12:0,23,503	0/0:6,0:6:18.06:0,18,418	0/0:6,0:6:18.04:0,18,350	0/0:15,0:15:41.88:0,42,805
chr10	96377089	.	AG	A	531.89	PASS	AB=0.981;AC=18;AF=0.321;AN=56;BaseQRankSum=6.282;DP=294;FS=11.549;HRun=1;HaplotypeScore=105.9349;InbreedingCoeff=0.5183;MQ=63.04;MQ0=0;MQRankSum=-3.656;QD=3.67;ReadPosRankSum=2.373;VQSLOD=-0.6741;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:2.99:70,3,0	0/0:8,0:8:23.63:0,24,239	0/0:14,0:10:7.44:0,7,90	0/0:9,0:8:14.97:0,15,137	0/0:5,0:5:14.96:0,15,164	0/1:14,2:15:1.23:80,0,1	0/0:7,1:8:9.16:0,9,86	0/0:21,0:21:57.05:0,57,651	0/1:9,0:9:3.99:15,0,4	0/0:13,0:12:5.77:0,6,64	0/1:13,0:13:26.46:65,0,26	0/1:12,0:12:24.41:24,0,30	1/1:8,1:9:5.94:62,6,0	1/1:11,0:10:5.35:109,5,0	0/0:6,0:6:17.70:0,18,170	1/1:6,0:6:13.58:66,14,0	1/1:13,0:13:7.27:57,7,0	1/1:21,0:20:32.28:127,32,0	0/0:11,0:11:30.30:0,30,338	0/0:4,0:4:11.94:0,12,104	0/0:6,0:6:18.04:0,18,208	0/1:4,0:4:1.26:30,0,1	0/1:11,0:11:0.37:2,0,0	0/0:9,0:9:8.50:0,8,61	0/0:9,0:9:10.01:0,10,246	0/0:6,0:6:18.06:0,18,220	0/0:6,0:6:16.86:0,17,181	0/0:14,0:14:42:0,42,487
chr10	96377090	.	G	GAAA	3713.21	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=4.116;DP=305;FS=3.280;HRun=9;HaplotypeScore=107.8756;InbreedingCoeff=0.9439;MQ=62.73;MQ0=0;MQRankSum=-6.942;QD=30.19;ReadPosRankSum=1.720;VQSLOD=2.7349;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:19:21.45:0,21,138	0/0:8,0:8:24.07:0,24,286	0/0:14,0:10:15.77:0,16,141	0/0:10,0:9:11.83:0,12,122	0/0:6,0:6:12.01:0,12,152	1/1:5,10:15:36.07:572,36,0	1/1:3,4:8:16.85:243,17,0	0/0:22,0:22:51.12:0,51,631	1/1:1,8:9:9.03:162,9,0	1/1:5,7:12:29.55:484,30,0	1/1:3,10:15:26.96:367,27,0	1/1:3,10:14:20.74:357,21,0	1/1:2,8:10:24:416,24,0	1/1:7,3:11:29.14:317,29,0	0/0:7,0:7:15:0,15,176	0/0:1,0:6:16.45:0,16,81	0/0:2,0:13:24.46:0,24,122	0/0:7,0:20:30.65:0,31,183	0/0:9,0:11:26.95:0,27,305	0/0:4,0:4:9.01:0,9,100	0/0:6,0:6:18.06:0,18,225	1/1:1,3:4:12.03:188,12,0	1/1:1,10:12:18.06:353,18,0	1/1:2,7:10:15.48:254,15,0	0/0:9,0:9:10.43:0,10,217	0/0:6,0:6:18.06:0,18,227	0/0:6,0:6:11.92:0,12,150	0/0:14,0:14:39.10:0,39,488
chr10	96377337	.	GAC	G	428.68	PASS	AB=0.917;AC=5;AF=0.089;AN=56;BaseQRankSum=7.465;DP=478;FS=32.667;HRun=0;HaplotypeScore=133.4386;InbreedingCoeff=0.2970;MQ=76.48;MQ0=14;MQRankSum=-5.604;QD=5.29;ReadPosRankSum=1.544;VQSLOD=1.6041;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,2:21:26.50:137,0,27	0/0:6,0:6:17.66:0,18,151	0/0:54,0:25:63.86:0,64,706	0/0:43,1:18:38.97:0,39,433	0/0:8,0:9:23.66:0,24,285	0/0:16,0:17:41.91:0,42,406	0/0:19,0:18:32.37:0,32,336	0/0:21,2:23:57.43:0,57,426	0/0:12,0:12:30.80:0,31,256	0/0:10,0:11:17.09:0,17,227	0/0:7,0:7:18:0,18,199	0/0:15,0:18:26.91:0,27,236	0/0:17,0:18:43.43:0,43,398	0/0:18,0:18:45.12:0,45,372	0/0:23,0:22:40.67:0,41,440	0/1:21,5:26:71.55:251,0,72	0/1:24,0:23:58.83:101,0,59	1/1:10,0:10:13.92:61,14,0	0/0:9,0:9:27:0,27,273	0/0:13,0:13:37.74:0,38,404	0/0:7,0:7:11.22:0,11,108	0/0:9,0:10:17.14:0,17,244	0/0:9,0:9:23.13:0,23,251	0/0:14,0:14:23.04:0,23,185	0/0:14,0:14:21.03:0,21,274	0/0:13,0:13:26.38:0,26,377	0/0:22,0:22:44.27:0,44,526	0/0:6,0:5:7.05:0,7,71
chr10	96377338	.	ACC	A	1792.17	PASS	AB=0.887;AC=22;AF=0.393;AN=56;BaseQRankSum=7.212;DP=480;FS=34.899;HRun=11;HaplotypeScore=127.6101;InbreedingCoeff=0.1031;MQ=75.27;MQ0=15;MQRankSum=-5.011;QD=6.84;ReadPosRankSum=2.023;VQSLOD=-0.4701;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,6:21:47.28:390,47,0	0/0:5,0:5:7.58:0,8,41	0/0:55,0:24:41.56:0,42,320	0/0:45,0:19:24.44:0,24,229	0/0:9,0:9:13.80:0,14,132	0/0:14,0:17:0.41:0,0,129	0/1:15,0:19:20.46:20,0,105	0/1:23,0:22:28.25:28,0,65	0/1:10,0:13:15.13:15,0,79	0/1:10,0:11:24.85:25,0,86	0/0:7,0:7:10.09:0,10,70	0/1:16,0:17:37.56:39,0,38	0/1:15,0:18:8.79:9,0,77	0/1:16,0:18:12.73:13,0,57	0/0:23,0:22:16.65:0,17,223	1/1:17,7:25:59.67:578,60,0	1/1:15,9:23:52.67:494,53,0	1/1:7,3:10:27.03:266,27,0	0/0:7,0:8:15.85:0,16,106	0/1:11,0:13:12.10:12,0,135	0/1:6,1:7:8.99:9,0,34	0/0:10,0:10:10.19:0,10,96	0/1:8,0:9:0.95:1,0,109	0/1:12,1:14:16.38:16,0,18	0/0:13,0:13:12.90:0,13,118	0/1:12,0:14:2.23:2,0,157	0/0:21,0:22:12.22:0,12,272	1/1:5,0:5:7.62:52,8,0
chr10	96377352	.	AAAAAAACAAAAAAAACCCC	A	3934.99	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=0.867;DP=481;FS=1.400;HRun=0;HaplotypeScore=239.3159;InbreedingCoeff=0.8493;MQ=57.46;MQ0=31;MQRankSum=-3.406;QD=34.52;ReadPosRankSum=2.447;VQSLOD=2.0745;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:71.64:0,72,1364	0/0:4,0:3:9.03:0,9,414	0/0:75,0:19:25.05:0,25,1057	0/0:58,0:19:30.23:0,30,1649	0/0:7,0:7:17.75:0,18,1014	1/1:8,4:12:9.97:601,10,0	1/1:12,3:15:12.02:472,12,0	0/0:28,0:23:66.18:0,66,3298	1/1:7,3:10:17.47:501,17,0	1/1:6,2:8:6.23:304,6,0	1/1:6,0:6:2.96:6,3,0	1/1:10,4:14:15.51:613,16,0	1/1:11,4:15:15:610,15,0	1/1:8,2:10:7.17:304,7,0	0/0:23,0:22:36.56:0,37,2057	0/0:21,0:21:57.08:0,57,1028	0/0:20,0:19:36.06:0,36,809	0/0:10,0:10:15.03:0,15,296	0/0:13,0:12:30.10:0,30,1932	0/0:12,0:12:26.73:0,27,1746	0/0:12,0:12:14.24:0,14,742	1/1:6,1:7:6.96:201,7,0	1/1:6,1:7:6.95:175,7,0	1/1:9,1:10:0.90:147,1,0	0/0:13,0:13:15.05:0,15,804	0/0:16,0:16:21.68:0,22,2468	0/0:22,0:22:44.63:0,45,2192	0/0:5,0:4:12.04:0,12,724
chr10	96377358	.	AC	A	1902.54	PASS	AB=0.985;AC=30;AF=0.536;AN=56;BaseQRankSum=6.899;DP=459;FS=7.196;HRun=1;HaplotypeScore=119.7832;InbreedingCoeff=0.2591;MQ=59.58;MQ0=31;MQRankSum=-6.032;QD=5.87;ReadPosRankSum=2.450;VQSLOD=0.5445;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,15:34:64.99:562,65,0	0/1:4,0:4:18.68:35,0,19	0/1:73,2:19:11.11:11,0,150	0/1:57,1:20:32.04:32,0,103	0/0:7,0:7:2.16:0,2,35	0/1:11,0:11:7:54,0,7	0/1:11,0:10:4.58:40,0,5	0/0:30,1:26:42.06:0,42,272	0/1:7,1:8:8.87:40,0,9	0/1:4,0:4:8.42:29,0,8	1/1:3,0:3:1.72:3,2,0	1/1:6,0:6:11.70:69,12,0	1/1:7,0:7:14.66:77,15,0	1/1:7,0:7:8.91:43,9,0	0/0:21,0:20:21.68:0,22,127	1/1:15,11:26:58.89:579,59,0	1/1:12,8:20:39.02:344,39,0	1/1:5,2:7:12.94:110,13,0	0/0:16,0:15:5.17:0,5,113	0/0:12,0:12:22.90:0,23,117	0/1:13,0:13:0.86:1,0,42	1/1:4,0:4:3.40:19,3,0	0/1:5,0:5:11.65:12,0,13	1/1:7,0:7:3.40:18,3,0	0/1:13,0:13:1.95:2,0,35	0/0:18,0:18:15.69:0,16,121	0/0:25,0:25:36.06:0,36,226	0/0:5,0:4:5.59:0,6,28
chr10	96377363	.	AAAAACCC	A	4226.60	PASS	AC=28;AF=0.519;AN=54;BaseQRankSum=7.931;DP=415;FS=7.231;HRun=0;HaplotypeScore=140.5883;InbreedingCoeff=0.8520;MQ=65.22;MQ0=31;MQRankSum=-9.186;QD=36.44;ReadPosRankSum=3.106;VQSLOD=4.1854;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,11:38:48.14:1204,48,0	0/0:5,0:4:12.02:0,12,244	0/0:74,0:21:43.42:0,43,1189	0/0:56,0:21:44.36:0,44,1255	0/0:6,0:6:18.05:0,18,405	1/1:4,0:4:12.04:194,12,0	1/1:4,0:3:12:166,12,0	0/0:31,0:26:72.19:0,72,1626	1/1:4,0:4:9.03:145,9,0	1/1:2,0:2:6.02:97,6,0	./.	1/1:4,0:4:12.04:193,12,0	1/1:4,0:4:12.04:194,12,0	1/1:2,0:2:6.02:97,6,0	0/0:21,0:20:30.56:0,31,731	1/1:16,9:25:31.79:970,32,0	1/1:10,8:18:27.23:598,27,0	1/1:6,1:7:15.02:222,15,0	0/0:17,0:16:45.14:0,45,1039	0/0:11,0:11:33.11:0,33,787	0/0:15,0:15:18.06:0,18,427	1/1:1,0:1:3.01:49,3,0	1/1:2,0:2:3.01:48,3,0	1/1:1,0:1:3.01:49,3,0	0/0:14,0:14:11.45:0,11,316	0/0:17,0:17:51.17:0,51,1272	0/0:23,0:23:42.23:0,42,921	0/0:7,0:6:12:0,12,264
chr10	96377364	.	AAAACCC	A	3844.27	PASS	AC=28;AF=0.519;AN=54;BaseQRankSum=8.344;DP=418;FS=5.340;HRun=0;HaplotypeScore=136.7082;InbreedingCoeff=0.8484;MQ=68.57;MQ0=31;MQRankSum=-8.731;QD=33.43;ReadPosRankSum=3.350;VQSLOD=3.3275;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:36,2:38:37.13:1113,37,0	0/0:5,0:4:12.03:0,12,224	0/0:76,0:22:46.26:0,46,1206	0/0:59,0:23:21.66:0,22,1172	0/0:6,0:6:18.05:0,18,335	1/1:4,0:4:12.04:166,12,0	1/1:4,0:3:12.01:146,12,0	0/0:30,0:25:72.23:0,72,1441	1/1:4,0:4:9.03:125,9,0	1/1:2,0:2:6.02:83,6,0	./.	1/1:4,0:4:12.04:166,12,0	1/1:4,0:4:12.04:166,12,0	1/1:2,0:2:6.02:83,6,0	0/0:21,0:20:30.57:0,31,622	1/1:23,1:24:50.06:937,50,0	1/1:18,0:18:15.72:538,16,0	1/1:6,1:7:14.98:196,15,0	0/0:18,0:17:48.14:0,48,922	0/0:11,0:11:33.11:0,33,682	0/0:15,0:15:18.06:0,18,356	1/1:1,0:1:3.01:41,3,0	1/1:2,0:2:3.01:41,3,0	1/1:1,0:1:3.01:42,3,0	0/0:14,0:14:10.36:0,10,268	0/0:17,0:17:51.17:0,51,1119	0/0:24,0:24:41.70:0,42,782	0/0:7,0:6:12.01:0,12,223
chr10	96377367	.	AC	A	3733.06	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=1.571;DP=401;FS=19.785;HRun=4;HaplotypeScore=107.5694;InbreedingCoeff=0.6079;MQ=72.41;MQ0=28;MQRankSum=-4.756;QD=13.83;ReadPosRankSum=4.248;VQSLOD=1.8958;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:30:52.99:210,53,0	1/1:2,2:3:6.02:67,6,0	0/0:72,1:24:39.84:0,40,378	0/0:55,1:21:30.44:0,30,381	1/1:1,7:8:15.03:160,15,0	1/1:5,0:5:8.88:28,9,0	1/1:5,0:5:10.80:33,11,0	1/1:5,26:26:60.39:595,60,0	1/1:9,0:9:15.69:46,16,0	1/1:2,0:2:4.44:14,4,0	./.	1/1:5,0:5:8.88:28,9,0	1/1:5,0:5:10.92:34,11,0	1/1:3,0:3:5.69:17,6,0	1/1:1,17:18:24.01:268,24,0	1/1:12,0:17:36.03:135,36,0	1/1:11,0:16:21.03:74,21,0	1/1:3,0:4:7.12:25,7,0	1/1:1,16:16:45.04:479,45,0	1/1:3,8:11:29.94:310,30,0	1/1:2,13:15:17.79:191,18,0	1/1:1,0:1:2.22:7,2,0	1/1:3,0:3:3.47:10,3,0	1/1:2,0:2:4.26:13,4,0	1/1:1,12:13:11.94:111,12,0	1/1:2,15:17:47.94:446,48,0	1/1:2,21:23:29.78:341,30,0	1/1:1,4:5:9:93,9,0
chr10	96379668	.	CACG	C	3819.83	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=11.362;DP=781;FS=7.329;HRun=0;HaplotypeScore=112.8659;InbreedingCoeff=0.9916;MQ=92.16;MQ0=0;MQRankSum=-3.283;QD=41.98;ReadPosRankSum=2.608;VQSLOD=5.2871;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,42:43:99:1736,108,0	0/0:6,0:6:15.05:0,15,345	0/0:36,0:36:99:0,102,2165	0/0:32,0:32:93.25:0,93,1915	0/0:13,0:13:33.10:0,33,712	0/0:23,0:23:69.18:0,69,1522	0/0:26,0:26:78.09:0,78,1595	0/0:31,0:31:87.30:0,87,1984	0/0:36,0:36:99:0,108,2481	0/0:27,0:27:75.22:0,75,1662	0/0:17,0:17:48.16:0,48,1092	0/0:49,0:49:99:0,144,3285	0/0:26,0:26:78.27:0,78,1791	0/0:27,0:27:75.21:0,75,1636	0/0:47,0:47:99:0,135,3096	1/1:3,45:48:99:2084,123,0	0/0:24,0:24:63.22:0,63,1436	0/0:19,0:19:54.08:0,54,1177	0/0:26,0:26:78.22:0,78,1695	0/0:19,0:19:57.18:0,57,1256	0/0:44,0:44:99:0,117,2694	0/0:16,0:16:48.12:0,48,1044	0/0:16,0:16:48.15:0,48,1061	0/0:27,0:27:75.24:0,75,1677	0/0:12,0:12:36.12:0,36,829	0/0:35,0:35:99:0,99,2279	0/0:44,0:44:99:0,129,2944	0/0:12,0:12:36.12:0,36,829
chr10	96379892	.	C	CGTGT	6492.26	PASS	AB=0.756;AC=36;AF=0.643;AN=56;BaseQRankSum=3.494;DP=597;FS=1.513;HRun=0;HaplotypeScore=206.6440;InbreedingCoeff=0.6324;MQ=60.80;MQ0=6;MQRankSum=-4.616;QD=15.64;ReadPosRankSum=-3.891;VQSLOD=3.8253;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:36:25.32:190,25,0	0/0:6,0:6:8.90:0,9,61	0/0:35,0:17:17.17:0,17,268	0/0:28,0:13:14.65:0,15,190	0/0:14,0:14:13.96:0,14,104	1/1:5,14:19:15.05:371,15,0	1/1:10,13:23:18.06:447,18,0	1/1:8,0:18:1.19:149,1,0	1/1:5,18:24:42.14:1043,42,0	1/1:12,10:22:44.96:860,45,0	0/1:4,4:8:0:0,0,0	0/1:7,15:23:18.06:663,0,18	1/1:8,8:16:33.08:699,33,0	1/1:2,13:18:29.89:683,30,0	0/0:20,0:21:32.64:0,33,229	1/1:9,0:26:5.66:112,6,0	0/0:40,0:41:81.25:0,81,1348	0/0:26,0:26:72.20:0,72,1151	0/1:13,0:17:15.49:122,0,15	1/1:7,0:13:15.26:66,15,0	1/1:10,0:43:47.30:230,47,0	1/1:5,11:16:12.04:300,12,0	1/1:4,7:13:5.81:87,6,0	1/1:9,24:34:5.32:149,5,0	0/0:11,0:11:11.69:0,12,87	0/1:21,1:22:99:144,0,120	1/1:6,0:16:25.21:115,25,0	1/1:1,0:6:13.99:63,14,0
chr10	96379906	.	TCTGTGTGTGTGTGCGCGCGCGC	T	6621.28	PASS	AB=0.749;AC=10;AF=0.179;AN=56;BaseQRankSum=2.957;DP=579;FS=0.000;HRun=0;HaplotypeScore=328.4630;InbreedingCoeff=0.7251;MQ=51.42;MQ0=7;MQRankSum=-6.948;QD=64.28;ReadPosRankSum=0.503;VQSLOD=2.9085;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:50.53:0,51,4341	1/1:0,6:6:9.03:564,9,0	0/0:28,0:9:17.02:0,17,434	0/1:24,0:11:4.36:4,0,266	1/1:0,16:16:19.31:1124,19,0	0/0:20,0:20:20.10:0,20,1304	0/0:28,0:29:50.20:0,50,3112	0/0:21,0:19:48.15:0,48,2555	0/0:20,0:20:45.15:0,45,3506	0/0:18,0:18:34.18:0,34,3080	0/0:10,0:10:7.46:0,7,444	0/0:22,0:22:36.32:0,36,2621	0/0:14,0:14:17.21:0,17,2698	0/0:16,0:16:33.11:0,33,2729	1/1:1,21:22:33.58:2062,34,0	0/0:21,0:22:42.13:0,42,2890	0/0:37,0:37:84.81:0,85,8383	0/0:30,0:30:90.22:0,90,7570	0/0:12,0:12:33.96:0,34,1471	0/0:14,0:14:26.30:0,26,1964	0/0:45,0:45:72.25:0,72,5737	0/0:17,0:17:31.17:0,31,1739	0/0:11,0:11:9.03:0,9,717	0/0:32,0:32:14.03:0,14,824	1/1:0,12:12:18.06:1094,18,0	0/1:3,19:22:99:1773,0,378	0/0:15,0:15:42.14:0,42,3202	0/0:5,0:5:15.05:0,15,1344
chr10	96380355	.	TAACTG	T	12229.58	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=9.461;DP=724;FS=5.131;HRun=0;HaplotypeScore=172.8617;InbreedingCoeff=0.9736;MQ=81.86;MQ0=0;MQRankSum=-16.964;QD=48.92;ReadPosRankSum=-0.391;VQSLOD=4.8842;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.33:0,96,2891	1/1:1,11:12:30.10:629,30,0	0/0:21,0:21:51.17:0,51,1453	0/0:28,0:28:72.22:0,72,1826	1/1:1,24:25:59.95:1238,60,0	0/0:25,0:25:75.26:0,75,2223	0/0:24,0:24:69.22:0,69,2036	1/1:4,33:37:96.30:1880,96,0	0/0:29,0:29:84.29:0,84,2560	0/0:37,0:37:99:0,108,3335	0/0:16,0:16:48.16:0,48,1470	0/0:27,0:27:75.26:0,75,2291	0/0:39,0:39:99:0,114,3496	0/0:36,0:36:99:0,99,2972	1/1:2,33:35:90.31:1886,90,0	0/0:31,0:31:87.30:0,87,2649	0/0:28,0:28:78.27:0,78,2349	0/0:28,0:28:78.27:0,78,2375	1/1:2,13:15:36.12:755,36,0	1/1:3,22:25:60.17:1205,60,0	1/1:2,3:5:3.01:63,3,0	0/0:15,0:15:45.15:0,45,1344	0/0:23,0:23:66.23:0,66,2045	0/0:32,0:32:90.31:0,90,2661	1/1:3,15:18:42.14:880,42,0	1/1:1,29:30:87.28:1771,87,0	1/1:6,30:35:75.26:1545,75,0	1/1:5,7:12:18.06:377,18,0
chr10	96380514	.	T	TC	8849.52	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=9.300;DP=674;FS=0.974;HRun=2;HaplotypeScore=84.5890;InbreedingCoeff=0.9997;MQ=87.52;MQ0=2;MQRankSum=-4.737;QD=37.50;ReadPosRankSum=-0.952;VQSLOD=4.8827;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:99:0,111,1358	1/1:0,8:8:24.08:345,24,0	0/0:28,0:28:67.50:0,68,794	0/0:31,0:30:72.12:0,72,858	1/1:2,16:18:47.99:638,48,0	0/0:29,0:29:81.24:0,81,992	0/0:32,0:32:90.27:0,90,1104	1/1:0,25:25:75.24:1060,75,0	0/0:25,0:25:72.23:0,72,890	0/0:26,0:26:75.23:0,75,921	0/0:16,0:16:45.11:0,45,524	0/0:23,0:23:69.22:0,69,852	0/0:24,0:24:69.20:0,69,855	0/0:24,0:24:72.20:0,72,867	1/1:1,21:22:54.18:776,54,0	0/0:17,0:17:48.07:0,48,560	0/0:32,0:32:96.30:0,96,1189	0/0:19,0:19:48.15:0,48,595	1/1:1,21:22:57.18:801,57,0	1/1:0,25:25:69.13:945,69,0	1/1:0,33:33:84.28:1209,84,0	0/0:23,0:23:63.20:0,63,779	0/0:26,0:26:72.18:0,72,875	0/0:24,0:24:72.17:0,72,862	1/1:1,22:23:54.11:752,54,0	1/1:3,28:31:53.42:1201,53,0	1/1:1,16:17:42.14:604,42,0	1/1:0,12:12:36.12:518,36,0
chr10	96381062	.	GA	G	624.49	PASS	AB=0.821;AC=12;AF=0.250;AN=48;BaseQRankSum=-3.844;DP=331;FS=3.357;HRun=10;HaplotypeScore=66.6985;InbreedingCoeff=0.6861;MQ=75.22;MQ0=2;MQRankSum=-0.219;QD=8.44;ReadPosRankSum=-3.404;VQSLOD=1.6301;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:66.14:0,66,705	./.	0/1:12,1:11:7.63:8,0,74	0/0:16,0:12:10.57:0,11,81	./.	0/0:23,0:24:59.98:0,60,636	0/0:22,0:22:35.15:0,35,496	1/1:2,11:13:10.15:214,10,0	0/0:14,0:14:36.08:0,36,390	0/0:15,0:15:24.05:0,24,256	0/0:9,0:9:18.05:0,18,199	0/0:18,0:18:38.98:0,39,387	0/0:11,0:11:20.99:0,21,217	0/0:8,0:8:9.50:0,9,101	./.	0/0:13,0:13:33.09:0,33,365	0/0:18,0:18:25.31:0,25,268	0/0:25,0:25:53.15:0,53,554	1/1:1,10:12:28.95:235,29,0	0/1:6,4:10:18.51:67,0,19	1/1:6,8:14:14.98:130,15,0	0/0:8,0:8:24.06:0,24,265	0/0:8,0:9:17.87:0,18,171	0/0:13,0:13:26.99:0,27,282	./.	0/0:2,0:2:6.02:0,6,66	1/1:4,4:8:11.77:104,12,0	1/1:3,1:4:2.99:26,3,0
chr10	96381077	.	TCA	T	1531.15	PASS	AB=0.903;AC=19;AF=0.396;AN=48;BaseQRankSum=1.460;DP=296;FS=7.615;HRun=0;HaplotypeScore=62.7498;InbreedingCoeff=-0.0557;MQ=79.70;MQ0=3;MQRankSum=-0.166;QD=7.36;ReadPosRankSum=9.115;VQSLOD=0.7322;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,3:26:10.72:265,0,11	./.	0/0:18,0:16:30.07:0,30,325	0/0:11,0:7:10.30:0,10,92	./.	0/1:21,2:23:72.35:168,0,72	0/1:18,2:20:63.87:137,0,64	0/0:12,0:12:23.99:0,24,225	0/1:15,0:15:42.50:71,0,43	0/1:13,2:15:70.48:185,0,70	0/1:7,1:8:4.50:84,0,4	0/1:8,7:15:9.48:155,0,9	0/1:9,0:9:7.85:48,0,8	1/1:5,1:6:7.59:41,8,0	./.	0/1:13,1:14:17.15:79,0,17	0/0:16,0:16:12.57:0,13,163	0/1:23,1:24:10.50:11,0,242	0/0:10,0:10:26.88:0,27,260	0/0:4,0:5:8.60:0,9,42	0/0:10,0:10:17.93:0,18,162	1/1:8,1:9:1.72:124,2,0	1/1:6,4:10:3.93:175,4,0	0/1:10,2:12:22.66:106,0,23	./.	1/1:2,0:2:5.83:33,6,0	0/0:4,0:4:5.74:0,6,38	0/0:1,0:1:3.01:0,3,51
chr10	96381079	.	ACC	A	3888.89	PASS	AC=28;AF=0.583;AN=48;BaseQRankSum=-7.736;DP=291;FS=2.161;HRun=11;HaplotypeScore=54.3415;InbreedingCoeff=0.8521;MQ=81.16;MQ0=3;MQRankSum=1.613;QD=21.49;ReadPosRankSum=5.060;VQSLOD=2.7640;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,18:27:56.20:602,56,0	./.	0/0:18,0:16:28.38:0,28,269	0/0:11,0:7:5.74:0,6,52	./.	1/1:8,14:22:42.06:437,42,0	1/1:6,13:19:36.06:382,36,0	0/0:10,0:10:6.01:0,6,70	1/1:3,12:15:27.06:288,27,0	1/1:8,7:15:30.05:306,30,0	1/1:2,6:8:18.04:191,18,0	1/1:9,6:15:30.06:318,30,0	1/1:1,7:8:15.03:160,15,0	1/1:2,3:5:9.02:96,9,0	./.	1/1:3,12:15:33.06:351,33,0	0/0:13,0:15:24.63:0,25,99	0/0:14,0:23:13.13:0,13,140	0/0:11,0:11:14.96:0,15,161	0/0:5,0:5:6:0,6,54	0/0:11,0:11:10.26:0,10,101	1/1:2,7:9:24.06:253,24,0	1/1:7,3:10:24.06:253,24,0	1/1:4,7:11:18.03:189,18,0	./.	1/1:0,2:2:6.02:64,6,0	0/0:4,0:4:5.98:0,6,50	0/0:1,0:1:3.01:0,3,39
chr10	96382092	.	TCACACA	T	14219.11	PASS	AB=0.615;AC=47;AF=0.839;AN=56;BaseQRankSum=9.085;DP=696;FS=0.458;HRun=0;HaplotypeScore=178.3664;InbreedingCoeff=0.8003;MQ=65.72;MQ0=4;MQRankSum=-10.943;QD=25.44;ReadPosRankSum=-0.186;VQSLOD=4.2605;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,35:47:33.15:971,33,0	1/1:1,0:6:6.51:85,7,0	0/0:42,0:29:42.06:0,42,835	0/0:37,0:29:39.29:0,39,1091	1/1:4,0:18:13.66:275,14,0	1/1:7,11:18:37.37:696,37,0	1/1:12,20:33:21.79:906,22,0	1/1:9,0:28:46.66:427,47,0	1/1:9,21:31:51.17:1005,51,0	1/1:4,18:23:57.16:1077,57,0	1/1:2,13:15:30.03:512,30,0	1/1:5,27:32:63.21:1179,63,0	1/1:11,19:30:60.21:1270,60,0	1/1:9,16:25:39.13:754,39,0	1/1:4,0:24:43.03:588,43,0	1/1:5,15:20:33.11:678,33,0	0/0:35,0:36:90.29:0,90,2749	0/0:18,0:20:45.11:0,45,1237	1/1:6,0:17:5.84:293,6,0	1/1:2,0:16:6.20:195,6,0	1/1:13,0:41:24.03:298,24,0	1/1:3,13:16:39.13:699,39,0	1/1:5,11:16:18.05:382,18,0	0/1:12,20:32:6.97:361,0,7	1/1:6,0:21:30.10:419,30,0	1/1:5,0:30:62.96:812,63,0	1/1:6,0:13:12.04:168,12,0	1/1:0,0:7:13.59:169,14,0
chr10	96382409	.	G	GTGCA	12254.44	PASS	AB=0.569;AC=21;AF=0.375;AN=56;BaseQRankSum=-7.071;DP=717;FS=0.692;HRun=0;HaplotypeScore=189.9697;InbreedingCoeff=0.9179;MQ=78.05;MQ0=0;MQRankSum=-11.193;QD=49.81;ReadPosRankSum=0.377;VQSLOD=4.8812;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,141,2470	1/1:1,7:8:18.06:470,18,0	0/0:20,0:20:54.18:0,54,961	0/0:17,0:17:45.09:0,45,717	1/1:7,13:20:39.13:991,39,0	0/0:19,0:19:54.19:0,54,980	0/0:31,0:31:81.28:0,81,1468	1/1:14,7:23:42.13:996,42,0	0/0:26,0:26:72.23:0,72,1270	0/0:26,0:26:63.22:0,63,1138	0/0:26,0:26:72.23:0,72,1279	0/0:34,0:34:93.32:0,93,1690	0/0:28,0:28:75.26:0,75,1364	0/0:20,0:20:57.16:0,57,975	1/1:5,31:36:81.28:2120,81,0	0/0:33,0:33:96.33:0,96,1746	0/0:38,0:38:99:0,108,1919	0/0:32,0:32:87.30:0,87,1570	1/1:7,7:15:36.10:886,36,0	1/1:7,13:22:33.11:860,33,0	1/1:14,14:31:30.10:779,30,0	0/0:23,0:23:63.22:0,63,1137	0/0:18,0:18:42.14:0,42,764	0/0:29,0:29:81.28:0,81,1462	1/1:2,17:20:45.15:1177,45,0	0/1:7,22:29:33.40:1704,0,33	1/1:2,29:32:75.26:1958,75,0	1/1:6,4:10:12.04:314,12,0
chr10	96382504	.	A	AT	3067.47	PASS	AB=0.795;AC=26;AF=0.464;AN=56;BaseQRankSum=-9.640;DP=679;FS=3.385;HRun=14;HaplotypeScore=95.8234;InbreedingCoeff=0.6280;MQ=71.46;MQ0=0;MQRankSum=1.020;QD=8.84;ReadPosRankSum=0.462;VQSLOD=3.0826;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:10,21:32:39.47:301,0,39	0/0:2,0:5:4.06:0,4,12	0/1:21,0:19:21.36:21,0,28	0/1:13,0:12:4.35:4,0,38	0/0:6,0:33:44.66:0,45,129	1/1:5,19:24:38.99:342,39,0	1/1:7,14:22:1.57:127,2,0	0/0:35,4:40:17.13:0,17,356	1/1:6,13:20:7.49:167,7,0	1/1:12,19:31:18.35:398,18,0	1/1:10,9:19:11.98:221,12,0	1/1:5,12:17:21.84:179,22,0	1/1:5,20:25:1.76:137,2,0	1/1:7,11:18:24.88:213,25,0	0/0:7,0:28:45.25:0,45,131	1/1:9,17:26:16.70:264,17,0	0/0:35,1:37:17.33:0,17,324	0/0:4,0:21:35.53:0,36,113	0/0:10,1:13:7.30:0,7,158	0/0:32,0:34:47.25:0,47,286	0/0:23,0:24:23.39:0,23,153	1/1:8,14:22:24:211,24,0	0/1:10,23:34:3.99:323,0,4	1/1:5,16:22:28.57:361,29,0	0/0:4,0:18:30.53:0,31,88	0/0:7,0:29:44.25:0,44,127	0/0:36,0:36:73.62:0,74,480	0/0:13,1:14:6.17:0,6,166
chr10	96383106	.	GGTGTGTGTGTGTGTGT	G	5496.28	PASS	AB=0.861;AC=30;AF=0.577;AN=52;BaseQRankSum=7.371;DP=387;FS=59.706;HRun=0;HaplotypeScore=163.9483;InbreedingCoeff=0.4696;MQ=67.85;MQ0=5;MQRankSum=-4.649;QD=26.42;ReadPosRankSum=1.866;VQSLOD=2.2944;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:31:18:0,18,698	0/0:5,0:5:5.95:0,6,44	0/0:25,0:15:12.02:0,12,117	0/0:21,0:14:9.01:0,9,85	0/1:8,0:8:99:148,0,120	1/1:3,8:11:3.01:133,3,0	0/1:9,11:20:14.12:125,0,14	./.	1/1:3,6:9:15.05:665,15,0	1/1:6,9:15:19.44:658,19,0	1/1:1,5:6:12:419,12,0	1/1:6,6:13:15.05:582,15,0	1/1:5,0:6:11.98:209,12,0	1/1:3,6:10:9.03:378,9,0	0/1:14,0:14:70.91:173,0,71	0/0:13,0:17:24.01:0,24,764	0/0:6,0:12:12:0,12,451	0/0:30,0:29:62.53:0,63,2105	1/1:14,0:16:6.02:224,6,0	1/1:3,0:9:9.03:335,9,0	0/1:8,0:9:0:0,0,0	1/1:3,7:9:14.88:168,15,0	1/1:4,1:6:12.03:324,12,0	0/1:5,8:13:12.54:71,0,13	0/1:14,0:14:76.77:213,0,77	0/0:9,0:9:17.94:0,18,162	1/1:13,0:18:18.06:671,18,0	./.
chr10	96383120	.	T	TAC	124.04	PASS	AB=1.000;AC=6;AF=0.111;AN=54;BaseQRankSum=-0.497;DP=329;FS=0.000;HRun=0;HaplotypeScore=93.5426;InbreedingCoeff=0.4267;MQ=53.63;MQ0=10;MQRankSum=1.061;QD=4.43;ReadPosRankSum=-3.828;VQSLOD=1.4599;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:32.06:0,32,385	0/0:6,0:6:5.98:0,6,76	0/0:23,0:11:30.10:0,30,445	0/0:25,0:8:21:0,21,320	0/1:12,0:12:10.59:11,0,167	0/0:10,0:10:8.92:0,9,107	0/0:18,0:18:20.70:0,21,271	1/1:0,4:5:15.02:188,15,0	0/0:6,0:6:14.51:0,15,80	0/0:13,0:13:35.59:0,36,428	0/0:6,0:6:14.73:0,15,116	0/0:11,0:10:14.25:0,14,79	0/0:5,0:5:14.92:0,15,165	0/0:7,0:7:8.68:0,9,47	0/0:15,0:15:27.07:0,27,338	0/0:18,0:17:42.10:0,42,594	0/0:14,0:14:26.73:0,27,337	0/0:33,0:31:86.28:0,86,1131	0/0:3,0:2:5.60:0,6,26	0/0:6,0:6:8.39:0,8,40	1/1:1,0:1:3.01:31,3,0	0/0:9,0:8:18.04:0,18,205	0/0:5,0:5:14.81:0,15,169	0/1:10,0:10:13.47:13,0,39	0/0:16,0:16:20.78:0,21,274	0/0:14,0:14:11.31:0,11,325	0/0:7,0:7:16.73:0,17,78	./.
chr10	96383131	.	GTGTGTGTGTGTGTT	G	4515.27	PASS	AB=0.993;AC=27;AF=0.540;AN=50;BaseQRankSum=4.311;DP=351;FS=3.738;HRun=0;HaplotypeScore=139.2887;InbreedingCoeff=-0.1422;MQ=51.52;MQ0=12;MQRankSum=-4.122;QD=18.97;ReadPosRankSum=4.027;VQSLOD=3.7099;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:20.58:0,21,882	1/1:6,0:6:2.99:24,3,0	0/0:22,0:11:1.21:0,1,209	0/1:26,0:8:11.89:12,0,145	0/1:19,2:21:28.24:473,0,28	0/1:9,0:9:14.98:73,0,15	0/1:18,0:18:65.09:65,0,73	./.	0/1:10,0:10:69.89:372,0,70	0/1:17,0:17:99:300,0,107	0/1:11,0:11:46.76:225,0,47	0/1:13,0:12:73.89:398,0,74	0/1:6,0:6:56.48:68,0,56	0/1:8,0:8:14.95:228,0,15	1/1:5,11:16:12.04:426,12,0	0/0:18,0:17:24.06:0,24,1105	0/0:13,0:13:10.27:0,10,841	0/0:30,0:28:26.82:0,27,1826	1/1:4,0:2:6.02:196,6,0	1/1:6,0:6:9.03:294,9,0	./.	0/1:9,0:8:23.61:24,0,46	0/1:7,0:7:61.42:144,0,61	0/1:11,0:11:18.26:18,0,22	1/1:6,9:15:9.03:343,9,0	1/1:18,0:18:30.18:245,30,0	1/1:7,0:7:18.06:587,18,0	./.
chr10	96383135	.	GTGTGTGTGTT	G	3140.17	PASS	AB=1.000;AC=28;AF=0.560;AN=50;BaseQRankSum=4.774;DP=364;FS=4.721;HRun=0;HaplotypeScore=128.2616;InbreedingCoeff=-0.0842;MQ=51.65;MQ0=12;MQRankSum=-4.342;QD=11.21;ReadPosRankSum=4.988;VQSLOD=1.9628;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:24.94:0,25,634	1/1:3,5:8:3.48:96,3,0	0/1:22,0:12:12.03:12,0,118	0/1:29,0:9:8.93:9,0,123	1/1:21,0:21:5.88:402,6,0	0/1:9,0:9:14.98:45,0,15	0/1:21,0:21:28.21:28,0,145	./.	0/1:10,0:10:69.89:233,0,70	0/1:20,0:20:99:179,0,183	0/1:11,0:11:48.90:140,0,49	0/1:13,0:12:73.89:240,0,74	0/1:7,0:7:37.39:37,0,74	0/1:8,0:8:14.95:145,0,15	1/1:16,0:16:12.04:298,12,0	0/0:19,0:18:26.98:0,27,829	0/0:15,0:15:16.23:0,16,651	0/1:30,0:28:80.40:80,0,1069	1/1:4,0:2:6.02:140,6,0	1/1:6,0:6:9.03:210,9,0	./.	0/0:9,0:8:2.99:0,3,50	0/1:7,0:7:61.89:88,0,62	0/0:11,0:11:4.17:0,4,30	1/1:15,0:15:9.03:222,9,0	1/1:16,0:16:36.95:282,37,0	1/1:7,0:7:18.06:419,18,0	./.
chr10	96385980	.	TTTTTTCC	T	1597.61	PASS	AB=0.961;AC=13;AF=0.232;AN=56;BaseQRankSum=6.266;DP=666;FS=12.773;HRun=0;HaplotypeScore=144.6986;InbreedingCoeff=0.0957;MQ=63.86;MQ0=12;MQRankSum=-0.402;QD=6.92;ReadPosRankSum=3.877;VQSLOD=1.9909;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:69.61:0,70,1234	0/1:7,0:7:20.45:108,0,20	0/0:67,0:17:25.42:0,25,651	0/0:63,0:16:20.47:0,20,513	0/1:18,15:33:28.12:426,0,28	0/1:25,0:25:4.65:5,0,507	0/1:22,0:22:38.35:38,0,689	0/0:33,0:33:88.90:0,89,1551	0/0:12,0:12:27.07:0,27,475	0/1:22,0:22:31.44:31,0,572	0/1:16,0:16:38.44:38,0,220	0/0:15,0:15:6.80:0,7,586	0/0:17,0:17:22.28:0,22,444	0/0:13,0:12:23.41:0,23,328	1/1:18,0:18:23.57:238,24,0	0/0:23,0:23:37.92:0,38,918	0/0:28,0:28:81.23:0,81,2028	0/0:15,0:14:42.14:0,42,1082	0/0:22,0:22:52.50:0,52,1164	0/0:29,0:29:80.24:0,80,1333	0/0:12,0:12:18.06:0,18,399	0/1:18,0:17:7.50:8,0,429	0/1:25,0:24:51.82:52,0,622	0/0:21,0:21:5.81:0,6,409	1/1:21,1:22:15.47:286,15,0	0/1:22,1:23:20.27:529,0,20	0/0:24,0:24:46.70:0,47,816	0/0:11,0:10:24.05:0,24,492
chr10	96385981	.	TTTTTCC	T	2437.57	PASS	AB=0.987;AC=17;AF=0.304;AN=56;BaseQRankSum=5.551;DP=657;FS=17.788;HRun=0;HaplotypeScore=131.1629;InbreedingCoeff=0.3185;MQ=64.19;MQ0=12;MQRankSum=-0.108;QD=10.11;ReadPosRankSum=4.234;VQSLOD=1.4805;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:63.19:0,63,949	1/1:2,3:5:0.14:130,0,0	0/0:68,0:17:9.67:0,10,557	0/0:63,0:17:23.25:0,23,473	1/1:25,2:27:41.59:561,42,0	0/1:24,1:25:43.07:43,0,384	0/1:22,0:22:99:110,0,509	0/0:33,0:33:66.35:0,66,1192	0/0:12,0:12:24.07:0,24,349	0/1:22,0:22:52.97:53,0,386	0/1:16,0:16:78.07:78,0,153	0/0:15,0:15:1.06:0,1,411	0/0:17,0:17:22.27:0,22,369	0/0:13,0:12:19.82:0,20,234	1/1:3,14:17:23.66:397,24,0	0/0:24,0:24:50.61:0,51,768	0/0:27,0:27:78.26:0,78,1709	0/0:16,0:15:45.08:0,45,989	0/0:22,0:22:33.92:0,34,948	0/0:31,0:31:82.41:0,82,1062	0/0:13,0:13:21.07:0,21,372	0/1:17,1:17:60.83:61,0,247	0/1:26,0:25:87.24:87,0,467	0/1:21,0:21:33.10:33,0,244	1/1:2,20:22:18:390,18,0	1/1:5,15:20:50.71:674,51,0	0/0:22,0:22:46.22:0,46,668	0/0:10,0:9:24.04:0,24,427
chr10	96385983	.	TTTCC	T	3182.67	PASS	AB=0.979;AC=18;AF=0.321;AN=56;BaseQRankSum=6.009;DP=632;FS=21.173;HRun=0;HaplotypeScore=107.2393;InbreedingCoeff=0.2718;MQ=64.16;MQ0=12;MQRankSum=0.003;QD=12.73;ReadPosRankSum=5.105;VQSLOD=1.4038;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:58.79:0,59,686	1/1:5,0:5:0.22:97,0,0	0/0:66,0:16:24.21:0,24,376	0/0:59,0:16:20.38:0,20,408	1/1:23,0:23:46.30:530,46,0	0/1:26,0:26:51.80:52,0,122	0/1:23,0:23:99:300,0,199	0/0:32,0:32:54.46:0,54,852	0/0:11,0:11:14.74:0,15,126	0/1:21,2:23:63.82:316,0,64	0/1:16,0:16:39.65:242,0,40	0/1:15,0:15:59.34:59,0,132	0/0:17,0:17:14.60:0,15,180	0/0:10,0:9:7.61:0,8,68	1/1:17,0:17:23.91:294,24,0	0/0:22,0:22:49.24:0,49,534	0/0:27,0:27:71.25:0,71,1067	0/0:14,0:13:39.11:0,39,663	0/0:22,0:23:10.43:0,10,669	0/0:29,0:29:14.36:0,14,613	0/0:13,0:13:21.06:0,21,295	0/1:16,0:15:38.55:214,0,39	0/1:25,0:24:99:114,0,155	0/1:18,2:20:35.12:294,0,35	1/1:22,0:22:20.12:259,20,0	1/1:19,0:19:50.53:594,51,0	0/0:21,0:21:41.06:0,41,478	0/0:10,0:9:23.95:0,24,327
chr10	96385984	.	TTCC	T	3849.08	PASS	AB=0.989;AC=24;AF=0.429;AN=56;BaseQRankSum=3.528;DP=618;FS=12.346;HRun=0;HaplotypeScore=97.0064;InbreedingCoeff=0.3731;MQ=64.64;MQ0=12;MQRankSum=0.307;QD=13.95;ReadPosRankSum=3.282;VQSLOD=2.1794;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:66.04:0,66,789	1/1:5,0:5:0.26:85,0,0	0/0:64,0:16:18.05:0,18,302	0/0:58,0:17:22.94:0,23,384	1/1:23,0:23:47.54:521,48,0	0/1:22,0:22:51.06:51,0,56	0/1:23,1:24:55.81:421,0,56	0/0:32,0:32:70.07:0,70,838	0/1:9,0:9:5.90:6,0,26	0/1:18,1:19:11.61:371,0,12	0/1:16,0:16:6.75:319,0,7	0/1:14,0:14:49.81:138,0,50	0/1:17,0:17:16.66:17,0,71	1/1:9,0:8:2.27:21,2,0	1/1:17,0:17:24.06:261,24,0	0/0:24,0:24:28.90:0,29,478	0/0:25,0:25:38.41:0,38,742	0/0:14,0:13:38.68:0,39,539	0/0:21,0:21:34.20:0,34,607	0/0:28,0:28:46.18:0,46,581	0/0:15,0:15:27.08:0,27,378	1/1:14,1:14:11.92:260,12,0	0/1:24,0:23:35.48:119,0,35	1/1:20,1:21:18.16:479,18,0	1/1:22,0:22:20.73:221,21,0	1/1:19,0:19:49.90:561,50,0	0/0:21,0:21:41.60:0,42,479	0/0:10,0:9:22.29:0,22,292
chr10	96385985	.	TCC	T	4251.69	PASS	AB=0.559;AC=31;AF=0.554;AN=56;BaseQRankSum=1.093;DP=600;FS=16.042;HRun=5;HaplotypeScore=87.2776;InbreedingCoeff=0.8446;MQ=65.69;MQ0=12;MQRankSum=-1.221;QD=16.42;ReadPosRankSum=3.102;VQSLOD=1.3761;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:69.17:0,69,865	1/1:5,0:5:0.24:72,0,0	0/0:63,0:17:22.63:0,23,330	0/0:56,0:16:23.31:0,23,373	1/1:22,1:23:48.06:509,48,0	0/1:4,15:19:2.96:52,0,3	1/1:21,1:22:48.06:538,48,0	0/0:32,0:32:80.88:0,81,921	1/1:7,0:7:3.01:35,3,0	1/1:18,1:19:38.67:446,39,0	1/1:4,12:16:15.21:394,15,0	1/1:13,0:14:17.90:200,18,0	1/1:5,11:16:5.96:56,6,0	1/1:3,4:6:3.01:41,3,0	1/1:16,1:17:24.01:224,24,0	0/0:24,0:24:49.09:0,49,544	0/0:23,0:23:59.21:0,59,637	0/0:14,0:13:34.93:0,35,489	0/0:21,0:21:50.90:0,51,650	0/0:29,0:29:59.03:0,59,654	0/0:15,0:15:27.01:0,27,368	1/1:11,1:11:27.04:298,27,0	1/1:7,13:19:11.47:138,11,0	1/1:21,0:21:48.10:544,48,0	1/1:22,0:22:21:183,21,0	1/1:19,0:19:47.77:521,48,0	0/0:23,0:23:48.05:0,48,586	0/0:9,0:8:21.04:0,21,273
chr10	96385989	.	CCT	C	1376.67	PASS	AB=0.918;AC=27;AF=0.482;AN=56;BaseQRankSum=6.663;DP=540;FS=2.544;HRun=0;HaplotypeScore=89.3025;InbreedingCoeff=0.5829;MQ=65.62;MQ0=7;MQRankSum=-0.793;QD=5.86;ReadPosRankSum=3.901;VQSLOD=2.8924;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:75.12:0,75,831	1/1:5,0:5:7.43:30,7,0	0/0:53,0:14:27.87:0,28,379	0/0:41,0:12:30.23:0,30,408	1/1:21,2:23:5.91:207,6,0	0/1:18,0:18:15.66:17,0,16	1/1:16,2:18:19.61:193,20,0	0/0:35,0:35:74.25:0,74,1183	0/1:3,4:7:35.36:35,0,41	0/1:19,0:19:51.62:52,0,89	1/1:13,1:14:34.71:232,35,0	1/1:8,1:9:13.83:85,14,0	1/1:11,0:11:2.92:19,3,0	0/1:7,0:6:18.94:26,0,19	1/1:16,1:17:20.51:116,21,0	0/0:17,0:17:39.11:0,39,450	0/0:20,0:20:36.08:0,36,589	0/0:13,0:12:36.09:0,36,617	0/0:22,0:22:59.94:0,60,903	0/0:25,0:25:51.10:0,51,865	0/0:13,0:13:27.09:0,27,480	1/1:11,0:10:19.13:98,19,0	1/1:15,1:15:10.86:75,11,0	1/1:16,2:18:26.75:233,27,0	1/1:21,0:21:16.56:58,17,0	0/1:20,1:21:33.30:109,0,33	0/0:22,0:22:47.88:0,48,781	0/0:10,0:9:21.04:0,21,329
chr10	96386491	.	G	GA	12234.67	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-16.901;DP=797;FS=1.872;HRun=3;HaplotypeScore=75.5165;InbreedingCoeff=0.9991;MQ=89.11;MQ0=0;MQRankSum=-3.272;QD=36.74;ReadPosRankSum=3.851;VQSLOD=5.4636;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,1582	0/0:8,0:8:21.06:0,21,252	0/0:25,0:25:75.20:0,75,854	0/0:33,0:33:84.15:0,84,949	0/0:23,0:23:66.20:0,66,792	1/1:1,22:23:66.22:924,66,0	1/1:2,42:44:99:1512,108,0	0/0:37,0:37:99:0,102,1205	1/1:1,29:30:75.25:1049,75,0	1/1:3,31:34:93.28:1265,93,0	1/1:0,22:22:63.17:860,63,0	1/1:0,41:41:99:1554,111,0	1/1:3,20:23:51.17:714,51,0	1/1:0,30:30:90.30:1260,90,0	0/0:28,0:28:81.23:0,81,960	0/0:23,0:23:66.20:0,66,792	0/0:29,0:29:84.22:0,84,980	0/0:30,0:30:84.22:0,84,993	0/0:14,0:14:39.11:0,39,458	0/0:26,0:26:75.23:0,75,900	0/0:51,0:51:99:0,144,1725	1/1:2,34:36:96.32:1333,96,0	1/1:1,22:23:54.18:756,54,0	1/1:2,25:27:72.24:1008,72,0	0/0:21,0:21:60.14:0,60,693	0/0:29,1:30:39.23:0,39,894	0/0:30,0:30:84.24:0,84,993	0/0:9,0:9:24:0,24,246
chr10	96386995	.	CAG	C	1984.38	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.537;DP=647;FS=2.599;HRun=0;HaplotypeScore=73.6038;InbreedingCoeff=0.9465;MQ=65.21;MQ0=1;MQRankSum=-3.327;QD=34.81;ReadPosRankSum=0.768;VQSLOD=5.9161;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,35:37:99:1418,99,0	0/0:3,0:3:6.02:0,6,110	0/0:14,0:13:39.13:0,39,702	0/0:14,0:14:42.14:0,42,708	0/0:35,0:35:99:0,99,1773	0/0:21,0:21:60.21:0,60,1090	0/0:25,0:25:75.26:0,75,1365	0/0:33,0:33:96.33:0,96,1755	0/0:17,0:17:45.15:0,45,825	0/0:29,0:29:84.28:0,84,1509	0/0:15,0:15:42.14:0,42,769	0/0:22,0:22:66.23:0,66,1185	0/0:21,0:21:63.22:0,63,1155	0/0:20,0:20:60.21:0,60,1099	0/0:21,0:21:60.19:0,60,1070	1/1:2,18:20:48.16:688,48,0	0/0:29,0:29:78.27:0,78,1429	0/0:19,0:19:54.19:0,54,990	0/0:14,0:14:42.14:0,42,770	0/0:30,0:30:90.31:0,90,1630	0/0:39,0:39:99:0,117,2103	0/0:13,0:13:36.12:0,36,660	0/0:28,0:28:78.27:0,78,1429	0/0:18,0:18:51.17:0,51,924	0/0:30,0:30:87.30:0,87,1585	0/0:33,0:33:93.32:0,93,1698	0/0:40,0:40:99:0,120,2156	0/0:7,0:7:21.07:0,21,385
chr10	96387287	.	CTTG	C	9172.64	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=18.816;DP=678;FS=3.143;HRun=0;HaplotypeScore=112.4856;InbreedingCoeff=0.9997;MQ=76.06;MQ0=0;MQRankSum=-3.480;QD=41.13;ReadPosRankSum=4.456;VQSLOD=6.0214;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.31:0,96,2100	0/0:10,0:10:27.09:0,27,603	0/0:15,0:15:39.10:0,39,745	0/0:17,0:17:38.27:0,38,795	0/0:32,0:32:96.33:0,96,2119	1/1:1,19:20:54.18:882,54,0	1/1:4,22:26:45.15:734,45,0	0/0:34,0:34:81.28:0,81,1809	1/1:0,23:23:54.18:881,54,0	1/1:0,19:19:57.18:906,57,0	1/1:0,14:14:39.13:637,39,0	1/1:1,29:30:78.11:1273,78,0	1/1:2,16:18:48.16:773,48,0	1/1:1,22:23:60.20:979,60,0	0/0:27,0:26:75.17:0,75,1581	0/0:19,0:19:32.21:0,32,1181	0/0:28,0:28:84.22:0,84,1705	0/0:25,0:25:72.21:0,72,1512	0/0:34,0:34:99:0,99,2083	0/0:34,0:34:93.32:0,93,2072	0/0:52,0:52:99:0,144,3208	1/1:0,16:16:45.15:735,45,0	1/1:2,18:20:48.16:784,48,0	1/1:0,14:14:36.12:588,36,0	0/0:22,0:22:66.20:0,66,1390	0/0:28,0:28:84.27:0,84,1794	0/0:30,0:30:87.26:0,87,1814	0/0:14,0:14:42.14:0,42,938
chr10	96387443	.	AT	A	4258.45	PASS	AB=0.707;AC=51;AF=0.911;AN=56;BaseQRankSum=-0.371;DP=531;FS=2.977;HRun=14;HaplotypeScore=78.2921;InbreedingCoeff=0.3802;MQ=81.42;MQ0=1;MQRankSum=-3.097;QD=8.30;ReadPosRankSum=4.194;VQSLOD=4.3689;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:28:52.76:332,53,0	0/1:2,8:10:7.01:102,0,7	0/1:20,1:19:1.03:1,0,98	0/0:18,0:15:7.45:0,7,83	1/1:5,17:23:21.24:279,21,0	1/1:2,0:15:24.43:72,24,0	1/1:1,0:15:23.65:68,24,0	1/1:10,16:28:41.71:255,42,0	1/1:1,0:16:20.36:60,20,0	1/1:4,0:22:35.07:101,35,0	1/1:3,0:20:27.27:84,27,0	1/1:3,0:24:36.43:107,36,0	1/1:3,0:9:12.21:36,12,0	1/1:2,0:20:28.50:84,29,0	1/1:6,19:26:46.63:314,47,0	1/1:4,15:20:28.80:191,29,0	1/1:4,11:17:39.73:256,40,0	1/1:5,17:22:10.79:219,11,0	1/1:7,14:22:18.99:266,19,0	1/1:5,18:24:27.64:324,28,0	0/1:6,6:13:68.17:80,0,68	1/1:4,0:24:34.59:102,35,0	1/1:1,0:16:24.43:71,24,0	1/1:0,0:15:24.44:72,24,0	1/1:2,13:16:0.97:142,1,0	1/1:5,13:19:17.85:246,18,0	1/1:4,17:22:43.53:293,44,0	1/1:0,5:5:14.88:103,15,0
chr10	96387888	.	AAAAG	A	1330.92	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.978;DP=569;FS=0.730;HRun=0;HaplotypeScore=86.3833;InbreedingCoeff=0.9800;MQ=63.13;MQ0=13;MQRankSum=1.409;QD=27.73;ReadPosRankSum=2.714;VQSLOD=3.6291;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:35:60.21:1114,60,0	0/0:14,0:14:39.13:0,39,1022	0/0:27,0:16:25.09:0,25,588	0/0:22,0:7:13.81:0,14,154	0/0:23,0:23:51.17:0,51,1261	0/0:19,0:19:51.18:0,51,1279	0/0:20,0:20:51.17:0,51,1251	0/0:30,0:27:69.19:0,69,1572	0/0:7,0:7:18.06:0,18,480	0/0:20,0:19:51.16:0,51,1251	0/0:22,0:21:54.19:0,54,1337	0/0:21,0:21:49.41:0,49,1237	0/0:15,0:15:39.06:0,39,935	0/0:17,0:17:39.13:0,39,984	0/0:15,0:15:42.14:0,42,1106	1/1:0,12:11:18.06:337,18,0	0/0:36,0:36:99:0,99,2265	0/0:40,0:40:99:0,102,2482	0/0:18,0:18:54.16:0,54,1218	0/0:19,0:19:54.18:0,54,1303	0/0:13,0:13:36.12:0,36,845	0/0:19,0:19:48.16:0,48,1256	0/0:14,0:14:38.97:0,39,925	0/0:19,0:19:51.17:0,51,1252	0/0:21,0:21:54.18:0,54,1366	0/0:23,0:23:66.21:0,66,1593	0/0:15,0:15:42.14:0,42,1094	0/0:12,0:12:36.12:0,36,957
chr10	96388184	.	G	GC	20708.63	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-9.926;DP=646;FS=0.000;HRun=5;HaplotypeScore=54.4744;InbreedingCoeff=0.9993;MQ=93.74;MQ0=1;MQRankSum=-11.907;QD=35.46;ReadPosRankSum=6.881;VQSLOD=3.5990;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,51:56:99:1933,147,0	1/1:0,10:10:30.10:395,30,0	0/0:32,0:32:78.17:0,78,823	0/0:30,0:29:78.16:0,78,813	1/1:4,32:36:93.07:1207,93,0	1/1:0,17:17:51.17:671,51,0	1/1:1,27:28:72.23:947,72,0	1/1:2,19:21:54.15:693,54,0	1/1:0,21:21:48.16:631,48,0	1/1:0,19:19:57.17:736,57,0	1/1:0,16:16:48.16:631,48,0	1/1:2,34:36:96.31:1263,96,0	1/1:1,19:20:48.16:630,48,0	1/1:1,26:27:75.24:986,75,0	1/1:0,25:25:72.23:947,72,0	1/1:1,26:27:69.22:907,69,0	1/1:1,17:18:51.17:671,51,0	1/1:3,23:26:69.22:908,69,0	1/1:2,11:13:33.08:417,33,0	1/1:0,13:13:32.98:375,33,0	1/1:1,29:30:84.27:1105,84,0	1/1:2,15:17:45.15:591,45,0	1/1:1,11:12:33.11:433,33,0	1/1:0,22:22:63.20:829,63,0	1/1:0,15:15:45.15:592,45,0	1/1:2,16:18:48.16:631,48,0	1/1:1,24:25:75.24:985,75,0	1/1:1,15:16:45.15:592,45,0
chr10	96389274	.	ACACCC	A	11441.31	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-15.054;DP=490;FS=0.000;HRun=0;HaplotypeScore=154.3887;InbreedingCoeff=0.6084;MQ=66.26;MQ0=0;MQRankSum=-1.678;QD=34.88;ReadPosRankSum=-0.549;VQSLOD=4.3872;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:17:32.85:268,33,0	0/0:3,0:3:8.97:0,9,94	0/1:15,0:12:22.06:22,0,701	0/0:12,0:11:9.62:0,10,462	0/1:20,0:20:32.85:33,0,335	1/1:1,23:23:54.19:1195,54,0	1/1:0,17:17:30.10:660,30,0	0/1:24,0:25:46.08:46,0,499	1/1:0,10:10:21.07:466,21,0	1/1:0,23:23:69.21:1438,69,0	1/1:2,32:34:87.30:1912,87,0	1/1:1,12:13:33.11:730,33,0	1/1:2,14:17:39.13:829,39,0	1/1:1,17:18:39.13:862,39,0	0/1:21,0:21:18.55:19,0,297	1/1:0,0:14:35.91:312,36,0	0/0:13,0:13:33.11:0,33,638	0/0:14,0:14:36.08:0,36,631	0/0:9,0:9:4.82:0,5,150	0/0:24,0:24:49.44:0,49,468	0/0:24,0:24:64.85:0,65,518	1/1:0,13:13:36.12:796,36,0	1/1:1,16:17:48.16:1045,48,0	1/1:0,17:16:36.12:797,36,0	0/0:19,0:18:56.56:0,57,485	0/0:16,0:16:30.09:0,30,355	0/0:28,0:26:29.29:0,29,568	0/1:12,0:12:12.80:13,0,199
chr10	96389276	.	AC	A	2011.11	PASS	AB=0.974;AC=48;AF=0.857;AN=56;BaseQRankSum=-2.540;DP=486;FS=2.217;HRun=10;HaplotypeScore=153.5616;InbreedingCoeff=0.1060;MQ=66.09;MQ0=0;MQRankSum=3.917;QD=4.16;ReadPosRankSum=5.731;VQSLOD=0.1612;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:17:23.45:72,23,0	0/0:3,0:3:1.21:0,1,9	0/1:15,0:12:2.12:2,0,101	0/1:9,1:10:10.21:10,0,76	0/1:20,0:20:7.63:24,0,8	1/1:23,0:22:39.96:125,40,0	1/1:17,0:17:22.20:69,22,0	0/1:23,2:25:20.40:20,0,34	1/1:10,0:10:15.54:48,16,0	1/1:23,0:23:46.78:146,47,0	1/1:33,0:33:64.35:202,64,0	1/1:12,0:12:24.42:77,24,0	1/1:16,0:17:29.74:105,30,0	1/1:17,0:17:28.86:90,29,0	1/1:20,0:20:26.84:95,27,0	1/1:14,0:14:26.28:80,26,0	1/1:2,11:13:26.98:234,27,0	1/1:2,12:14:29.98:260,30,0	1/1:8,0:11:2.68:14,3,0	1/1:24,0:24:6.95:38,7,0	1/1:25,0:25:13.08:41,13,0	1/1:13,0:13:27.26:91,27,0	1/1:17,0:17:35.92:114,36,0	1/1:17,0:16:26.64:83,27,0	0/1:19,0:18:19.45:19,0,23	0/1:16,0:16:7.93:22,0,8	1/1:27,0:25:4.40:28,4,0	1/1:12,0:12:13.16:32,13,0
chr10	96389278	.	C	CA	4841.76	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-11.235;DP=495;FS=7.958;HRun=0;HaplotypeScore=148.1355;InbreedingCoeff=0.9851;MQ=66.40;MQ0=0;MQRankSum=0.639;QD=23.06;ReadPosRankSum=-0.872;VQSLOD=4.5504;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:18.67:0,19,55	1/1:1,2:3:8.97:76,9,0	0/0:15,0:11:24.69:0,25,268	0/0:12,0:11:19.22:0,19,231	1/1:8,14:22:40.15:352,40,0	0/0:23,0:22:40.57:0,41,132	0/0:17,0:17:23.26:0,23,75	1/1:9,18:27:61.42:561,61,0	0/0:10,0:10:15.54:0,16,51	0/0:23,0:23:48.41:0,48,158	0/0:33,0:33:66.88:0,67,221	0/0:12,0:12:24.88:0,25,81	0/0:17,0:17:29.26:0,29,95	0/0:17,0:17:29.47:0,29,96	1/1:5,14:19:56.92:503,57,0	0/0:14,0:14:20.15:0,20,57	0/0:13,0:13:32.70:0,33,229	0/0:14,0:14:35.63:0,36,249	1/1:3,8:11:23.98:226,24,0	1/1:7,17:24:68.59:608,69,0	1/1:5,22:27:50.40:615,50,0	0/0:13,0:13:26.79:0,27,87	0/0:17,0:17:37.13:0,37,127	0/0:17,0:16:27.10:0,27,87	1/1:4,16:19:39.51:465,40,0	1/1:4,14:18:47.92:432,48,0	1/1:7,22:27:83.76:733,84,0	1/1:0,10:10:29.98:272,30,0
chr10	96389282	.	C	CA	4544.34	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-10.445;DP=508;FS=8.589;HRun=0;HaplotypeScore=150.3513;InbreedingCoeff=0.9895;MQ=65.88;MQ0=0;MQRankSum=1.831;QD=21.04;ReadPosRankSum=-1.155;VQSLOD=5.1653;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:35.92:0,36,294	1/1:1,2:3:8.95:70,9,0	0/0:15,0:11:24.80:0,25,279	0/0:12,0:11:21.26:0,21,234	1/1:7,14:21:28.23:336,28,0	0/0:23,0:22:53.71:0,54,410	0/0:17,0:17:29.62:0,30,196	1/1:10,18:28:71.32:527,71,0	0/0:10,0:10:20.96:0,21,171	0/0:22,0:22:62.16:0,62,447	0/0:34,0:34:86.19:0,86,634	0/0:12,0:12:32.82:0,33,251	0/0:17,0:17:41.48:0,41,293	0/0:19,0:19:44.67:0,45,328	1/1:5,14:19:56.92:484,57,0	0/0:15,0:15:37.03:0,37,287	0/0:15,0:15:35.60:0,36,246	0/0:14,0:14:35.48:0,35,233	1/1:4,8:12:32.95:295,33,0	1/1:7,17:24:26.90:458,27,0	1/1:5,22:27:68.37:576,68,0	0/0:14,0:14:35.80:0,36,273	0/0:17,0:17:46.93:0,47,341	0/0:17,0:16:35.82:0,36,275	1/1:4,16:19:46.86:448,47,0	1/1:7,14:21:50.14:408,50,0	1/1:8,22:28:80.80:677,81,0	1/1:1,9:11:32.02:264,32,0
chr10	96390493	.	C	CCT	2741.35	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.650;DP=642;FS=4.062;HRun=0;HaplotypeScore=73.9339;InbreedingCoeff=0.9992;MQ=77.68;MQ0=2;MQRankSum=-4.083;QD=40.31;ReadPosRankSum=2.217;VQSLOD=5.4788;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,117,1619	0/0:10,0:10:30.10:0,30,420	0/0:21,0:21:52.03:0,52,707	0/0:16,0:16:35.70:0,36,491	0/0:21,0:21:63.21:0,63,882	0/0:19,0:19:51.15:0,51,696	0/0:21,0:21:60.20:0,60,839	0/0:23,0:23:51.16:0,51,698	0/0:16,0:16:45.15:0,45,630	0/0:22,0:22:60.20:0,60,839	0/0:25,0:25:72.24:0,72,1006	0/0:19,0:19:57.17:0,57,764	0/0:14,0:14:39.13:0,39,545	0/0:21,0:21:63.17:0,63,831	0/0:24,0:24:72.24:0,72,1007	0/0:20,0:20:57.19:0,57,798	1/1:4,29:33:75.26:1351,75,0	1/1:1,33:33:84.29:1512,84,0	0/0:28,0:28:57.16:0,57,739	0/0:25,0:25:69.22:0,69,948	0/0:13,0:13:33.11:0,33,461	0/0:24,0:24:66.21:0,66,906	0/0:31,0:31:90.30:0,90,1260	0/0:16,0:16:45.13:0,45,611	0/0:33,0:33:90.28:0,90,1242	0/0:24,0:24:63.20:0,63,865	0/0:32,0:32:96.30:0,96,1326	0/0:12,0:12:30.10:0,30,420
chr10	96391086	.	CT	C	3748.26	PASS	AB=0.721;AC=45;AF=0.804;AN=56;BaseQRankSum=1.534;DP=602;FS=16.291;HRun=15;HaplotypeScore=75.7058;InbreedingCoeff=0.2706;MQ=70.02;MQ0=5;MQRankSum=2.085;QD=7.32;ReadPosRankSum=2.825;VQSLOD=1.1186;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:11,22:36:5.12:274,0,5	1/1:5,2:11:16.98:81,17,0	0/1:35,0:17:13.26:13,0,24	0/0:34,0:16:1.87:0,2,16	1/1:16,8:30:4.48:185,4,0	1/1:11,9:22:13.11:196,13,0	1/1:3,13:17:11.01:191,11,0	1/1:14,13:31:1.10:216,1,0	1/1:4,10:18:28.82:158,29,0	1/1:5,11:19:32.56:185,33,0	1/1:12,11:25:30.21:184,30,0	1/1:10,5:17:4.05:127,4,0	1/1:11,5:17:28.44:177,28,0	1/1:11,10:23:3.80:247,4,0	0/1:9,7:17:7.79:70,0,8	1/1:13,8:23:6.56:129,7,0	0/0:31,3:34:7.22:0,7,445	0/0:18,1:21:24.45:0,24,334	1/1:12,9:21:8.68:172,9,0	0/1:10,6:19:3.82:77,0,4	1/1:8,2:13:20.78:136,21,0	0/1:7,5:13:7.21:73,0,7	1/1:8,9:18:31.42:196,31,0	1/1:5,12:17:16.75:144,17,0	1/1:6,10:19:4.96:110,5,0	1/1:10,1:12:12.82:69,13,0	1/1:9,16:28:23.93:255,24,0	1/1:2,4:7:13.85:83,14,0
chr10	96392611	.	CACAT	C	4855.74	PASS	AB=0.987;AC=24;AF=0.444;AN=54;BaseQRankSum=10.712;DP=631;FS=24.989;HRun=0;HaplotypeScore=147.1294;InbreedingCoeff=-0.5748;MQ=59.88;MQ0=17;MQRankSum=-2.584;QD=10.46;ReadPosRankSum=10.071;VQSLOD=1.8970;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:28,1:29:83.44:244,0,83	0/1:9,1:9:9.93:180,0,10	0/0:36,0:20:29.19:0,29,647	0/0:38,0:17:35.93:0,36,343	0/1:14,0:14:34.95:88,0,35	0/1:18,0:18:32.26:184,0,32	0/1:29,0:29:86.91:244,0,87	0/0:28,0:27:15.12:0,15,251	0/1:19,1:20:67.36:337,0,67	0/1:27,0:26:61.45:377,0,61	0/1:14,0:13:48.23:105,0,48	0/1:31,0:31:99:422,0,120	0/1:28,0:28:50.30:298,0,50	1/1:29,0:29:14.96:474,15,0	0/1:28,0:28:93.11:235,0,93	0/1:11,0:11:57.20:106,0,57	0/1:13,0:13:56.14:80,0,56	1/1:9,0:8:0.78:114,1,0	0/1:11,0:11:30.94:48,0,31	./.	0/0:55,0:52:5.51:0,6,109	0/1:14,0:14:42.16:101,0,42	0/1:18,1:19:40.95:136,0,41	0/1:39,0:39:85.81:425,0,86	0/1:30,0:29:99:282,0,155	0/1:19,1:19:44.20:327,0,44	0/1:21,0:20:30.43:50,0,30	0/0:3,0:3:1.78:0,2,44
chr10	96392615	.	TACAC	T	10161.79	PASS	AB=1.000;AC=48;AF=0.889;AN=54;BaseQRankSum=0.789;DP=629;FS=3.257;HRun=0;HaplotypeScore=126.8538;InbreedingCoeff=0.6118;MQ=59.09;MQ0=18;MQRankSum=2.806;QD=18.54;ReadPosRankSum=4.412;VQSLOD=4.7116;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,24:32:33.58:561,34,0	1/1:3,7:9:18.06:302,18,0	0/0:35,0:19:29.99:0,30,419	0/0:40,0:17:7.22:0,7,138	1/1:5,9:14:12.04:203,12,0	1/1:4,14:18:21.07:354,21,0	1/1:7,20:29:33.11:560,33,0	0/1:28,0:27:16.07:116,0,16	1/1:7,16:23:35.38:599,35,0	1/1:8,18:25:54.14:837,54,0	1/1:4,9:12:14.79:254,15,0	1/1:9,23:32:47.83:813,48,0	1/1:6,19:25:41.81:625,42,0	1/1:4,25:28:54.11:898,54,0	1/1:6,19:26:33.11:537,33,0	1/1:4,7:11:14.78:254,15,0	1/1:13,0:13:14.86:191,15,0	1/1:8,0:7:14.54:212,15,0	1/1:9,0:9:12.80:92,13,0	./.	0/1:56,0:53:0.04:0,0,0	1/1:3,11:14:11.83:203,12,0	1/1:7,13:20:15.05:248,15,0	1/1:10,28:39:51.17:863,51,0	1/1:10,20:29:38.80:661,39,0	1/1:6,13:18:42.13:643,42,0	1/1:22,0:21:11.40:111,11,0	1/1:1,0:1:3:26,3,0
chr10	96392619	.	CACA	C	1537.39	PASS	AB=0.982;AC=21;AF=0.375;AN=56;BaseQRankSum=7.408;DP=612;FS=18.935;HRun=0;HaplotypeScore=143.3147;InbreedingCoeff=-0.4590;MQ=58.67;MQ0=18;MQRankSum=-0.053;QD=3.70;ReadPosRankSum=12.458;VQSLOD=-0.2395;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:89.30:89,0,110	0/1:10,0:9:35.69:47,0,36	0/0:32,0:16:32.54:0,33,682	0/0:41,0:16:32.87:0,33,459	0/1:13,0:13:30.78:31,0,59	0/1:17,0:17:53.58:54,0,87	0/1:30,0:30:79.84:80,0,184	0/0:30,0:29:59.71:0,60,690	0/1:23,0:23:84.92:85,0,146	0/1:25,0:24:99:108,0,152	0/1:11,0:10:22.07:43,0,22	0/1:28,0:28:97.30:135,0,97	0/1:25,0:25:86.13:86,0,130	0/1:29,0:28:26.41:147,0,26	0/1:24,0:24:40.09:100,0,40	0/1:9,0:9:39.80:40,0,43	1/1:4,9:13:16.25:138,16,0	0/1:5,5:9:1.05:127,0,1	0/0:10,0:10:15.23:0,15,104	0/0:6,0:6:2.97:0,3,20	0/0:53,0:50:12.04:0,12,153	0/1:13,0:13:30.58:31,0,59	0/1:20,0:20:34.07:34,0,57	0/1:35,0:35:75.75:143,0,76	0/1:31,0:30:88.63:89,0,300	0/1:20,0:18:82.23:91,0,82	0/0:22,0:21:1.10:0,1,52	0/0:2,0:2:5.81:0,6,47
chr10	96392621	.	CACACACACACACAG	C	1924.91	PASS	AB=0.798;AC=12;AF=0.214;AN=56;BaseQRankSum=-5.375;DP=613;FS=1.257;HRun=0;HaplotypeScore=225.4608;InbreedingCoeff=0.6203;MQ=57.48;MQ0=19;MQRankSum=-0.621;QD=13.01;ReadPosRankSum=-3.372;VQSLOD=1.6775;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:38.37:0,38,1137	0/0:10,0:9:18.06:0,18,561	0/0:33,0:17:35.40:0,35,537	0/0:44,0:17:12.40:0,12,165	0/0:13,0:13:14.98:0,15,424	0/0:17,0:17:24.08:0,24,666	0/0:28,0:28:42.14:0,42,1229	0/1:9,19:27:88.26:848,0,88	0/0:23,0:23:43.09:0,43,1263	0/1:25,0:24:20.90:21,0,988	0/0:12,0:11:18.95:0,19,561	0/0:29,0:29:51.18:0,51,1582	0/0:24,0:24:24.10:0,24,1017	0/0:29,0:28:57.67:0,58,1706	0/0:23,0:23:33.10:0,33,1008	0/0:8,0:8:15.52:0,16,511	0/0:12,0:12:2.44:0,2,165	0/0:9,0:8:13.53:0,14,279	1/1:2,9:11:29.54:493,30,0	1/1:0,6:6:3.01:36,3,0	1/1:9,45:51:3.48:49,3,0	0/0:13,0:13:12.02:0,12,303	0/0:19,0:19:15.05:0,15,516	0/0:36,0:36:56.94:0,57,1608	0/0:30,0:29:42.62:0,43,1242	0/0:19,0:17:19.32:0,19,925	1/1:3,19:21:14.12:507,14,0	1/1:2,0:2:6.02:132,6,0
chr10	96394633	.	ATTTTTCTT	A	1722.90	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.940;DP=702;FS=3.823;HRun=0;HaplotypeScore=171.1627;InbreedingCoeff=0.9583;MQ=64.91;MQ0=1;MQRankSum=-8.352;QD=35.16;ReadPosRankSum=1.985;VQSLOD=3.0036;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,4015	0/0:14,0:14:42.14:0,42,1725	0/0:18,0:17:37:0,37,1148	0/0:11,0:7:8.98:0,9,172	0/0:31,0:31:78.27:0,78,3105	0/0:24,0:24:69.24:0,69,2802	0/0:38,0:38:99:0,99,3734	0/0:47,0:47:99:0,114,4435	0/0:18,0:18:48.15:0,48,1767	0/0:20,0:20:57.18:0,57,2146	0/0:18,0:18:39.13:0,39,1491	0/0:26,0:26:63.09:0,63,2176	0/0:33,0:33:84.27:0,84,3234	0/0:21,0:21:39.13:0,39,1411	0/0:35,0:34:96.31:0,96,3678	0/0:39,0:39:99:0,108,4212	1/1:9,16:25:32.60:842,33,0	1/1:8,16:24:13.43:998,13,0	0/0:32,0:32:72.25:0,72,2549	0/0:20,0:20:51.17:0,51,1966	0/0:15,0:15:45.14:0,45,1603	0/0:20,0:20:51.18:0,51,2024	0/0:17,0:17:39.13:0,39,1600	0/0:31,0:31:84.24:0,84,3256	0/0:22,0:22:54.19:0,54,2277	0/0:24,0:24:57.19:0,57,2027	0/0:23,0:23:51.16:0,51,1943	0/0:20,0:19:33.11:0,33,1300
chr10	96398328	.	A	AAC	1266.12	PASS	AB=0.955;AC=38;AF=0.731;AN=52;BaseQRankSum=1.799;DP=531;FS=0.701;HRun=0;HaplotypeScore=156.2529;InbreedingCoeff=0.1304;MQ=64.77;MQ0=4;MQRankSum=-3.813;QD=2.83;ReadPosRankSum=-2.364;VQSLOD=2.4737;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:0:0,0,0	./.	0/0:38,0:26:31.53:0,32,355	0/0:38,0:25:24.89:0,25,239	1/1:3,0:3:3:25,3,0	1/1:17,0:17:11.92:109,12,0	1/1:27,9:38:20.56:220,21,0	1/1:13,0:11:5.34:23,5,0	1/1:18,0:19:12:104,12,0	1/1:16,0:16:18.81:155,19,0	0/1:4,1:5:0:0,0,0	1/1:26,1:28:17.81:167,18,0	0/1:21,0:23:6.15:67,0,6	1/1:25,0:26:3:26,3,0	0/1:15,0:15:0:0,0,0	1/1:21,0:19:2.74:19,3,0	0/1:32,0:32:4.92:5,0,175	0/1:25,0:25:11.06:11,0,115	1/1:11,1:12:23.33:165,23,0	./.	1/1:25,0:24:3.45:23,3,0	1/1:10,0:9:3:26,3,0	1/1:17,0:17:3:26,3,0	0/1:29,0:29:16.34:19,0,16	0/1:13,0:13:16.61:24,0,17	0/1:22,0:21:44.21:59,0,44	1/1:5,3:7:11.74:98,12,0	0/1:3,1:4:9.85:39,0,10
chr10	96398345	.	A	ACACACACACGCACG	8551.37	PASS	AB=0.847;AC=43;AF=0.796;AN=54;BaseQRankSum=-5.282;DP=660;FS=7.877;HRun=0;HaplotypeScore=233.7737;InbreedingCoeff=0.3394;MQ=50.52;MQ0=4;MQRankSum=-3.098;QD=15.84;ReadPosRankSum=-0.421;VQSLOD=2.4232;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:0.10:0,0,1	./.	0/0:38,0:21:33.52:0,34,1005	0/0:40,0:26:29.36:0,29,657	1/1:6,0:6:2.97:25,3,0	1/1:18,0:19:18.53:511,19,0	1/1:43,0:43:39.46:568,39,0	1/1:12,0:10:23.79:192,24,0	1/1:2,16:28:12.04:765,12,0	1/1:1,10:22:39.33:891,39,0	0/0:4,0:4:0.47:0,0,1	1/1:3,28:46:23.20:1380,23,0	1/1:4,18:30:4.45:758,4,0	1/1:2,21:33:3.01:210,3,0	1/1:23,0:23:3.47:26,3,0	1/1:23,0:21:8.73:102,9,0	0/1:30,0:30:91.96:92,0,806	0/1:27,0:27:99:130,0,673	1/1:23,0:23:64.64:734,65,0	1/1:6,0:6:3:25,3,0	1/1:26,0:24:14.33:131,14,0	1/1:4,11:17:3.48:210,3,0	1/1:1,14:24:3.01:210,3,0	0/1:6,22:40:2.29:233,0,2	1/1:15,0:14:9.43:111,9,0	1/1:23,0:23:65.96:776,66,0	1/1:16,0:15:28.88:274,29,0	1/1:7,0:7:11.12:199,11,0
chr10	96398347	.	ACG	A	568.32	PASS	AB=0.967;AC=15;AF=0.278;AN=54;BaseQRankSum=-0.317;DP=630;FS=1.188;HRun=0;HaplotypeScore=181.2169;InbreedingCoeff=-0.2123;MQ=49.76;MQ0=4;MQRankSum=-0.674;QD=2.10;ReadPosRankSum=0.796;VQSLOD=2.7478;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:31:21.58:0,22,79	./.	0/0:37,0:20:19.98:0,20,547	0/0:36,1:24:20.57:0,21,331	1/1:6,0:6:2.88:25,3,0	0/1:18,1:19:3.98:4,0,136	0/1:42,0:42:36.05:36,0,168	0/1:9,2:9:19.37:27,0,19	0/0:26,0:26:17.95:0,18,147	0/0:17,0:17:34.97:0,35,257	0/1:4,0:4:0:0,0,0	0/0:44,0:44:35.89:0,36,289	0/0:28,0:28:20.74:0,21,157	0/0:28,0:28:2.89:0,3,26	0/0:21,0:21:2.62:0,3,24	0/0:23,0:21:25.77:0,26,121	0/1:27,4:31:99:141,0,195	0/1:26,2:28:99:245,0,101	0/1:23,0:23:76.44:76,0,188	0/0:6,0:6:2.97:0,3,20	0/1:24,0:22:25.36:25,0,59	0/1:18,0:17:0.94:1,0,56	0/0:21,0:21:2.89:0,3,26	0/0:34,0:34:8.87:0,9,71	0/1:16,0:15:17.99:18,0,52	0/1:24,1:25:58.24:58,0,290	0/1:16,0:15:42.06:42,0,115	0/1:7,0:7:8.16:8,0,122
chr10	96398363	.	G	GCGCA	225.19	PASS	AB=0.909;AC=6;AF=0.107;AN=56;BaseQRankSum=4.877;DP=626;FS=4.538;HRun=0;HaplotypeScore=197.5467;InbreedingCoeff=0.0514;MQ=50.49;MQ0=2;MQRankSum=-3.484;QD=1.86;ReadPosRankSum=0.299;VQSLOD=2.5768;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,18:34:3.12:85,3,0	0/0:6,0:6:3:0,3,25	0/0:36,0:22:56.39:0,56,963	0/0:29,0:21:41.39:0,41,639	0/0:6,0:6:9:0,9,135	0/0:19,0:19:28.51:0,29,502	0/0:43,0:43:49.52:0,50,909	0/0:15,0:13:30.06:0,30,534	0/0:23,0:23:0.85:0,1,281	0/1:22,0:22:2.72:3,0,685	0/0:5,0:5:2.86:0,3,60	0/0:48,0:48:41.29:0,41,721	0/0:26,0:26:0.78:0,1,192	0/0:22,0:22:4.56:0,5,64	0/0:21,0:21:14.74:0,15,263	0/1:12,16:27:47.84:219,0,48	0/0:30,0:30:49.55:0,50,797	0/0:27,0:27:67.49:0,67,1027	0/1:21,0:21:17.52:18,0,476	0/0:11,0:11:14.99:0,15,223	0/0:22,0:20:20.82:0,21,378	0/1:15,0:15:9.01:9,0,170	0/0:21,0:21:7.40:0,7,124	0/0:28,0:28:8.94:0,9,111	0/0:17,0:16:17.75:0,18,318	0/0:22,0:22:46.61:0,47,916	0/0:19,0:18:22.10:0,22,445	0/0:9,0:9:17.18:0,17,425
chr10	96398695	.	GCTCTCCCTGCTGGGTA	G	4433.87	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.298;DP=614;FS=11.174;HRun=0;HaplotypeScore=256.9246;InbreedingCoeff=0.9930;MQ=80.78;MQ0=0;MQRankSum=-9.565;QD=88.68;ReadPosRankSum=0.810;VQSLOD=3.2756;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:69.24:2972,69,0	0/0:8,0:8:24.08:0,24,1659	0/0:26,0:26:78.27:0,78,5109	0/0:12,0:12:36.12:0,36,2293	0/0:17,0:17:48.16:0,48,3874	0/0:10,0:10:30.10:0,30,2194	0/0:23,0:23:69.22:0,69,4758	0/0:12,0:12:36.12:0,36,2557	0/0:17,0:17:51.16:0,51,3653	0/0:27,0:27:81.25:0,81,5158	0/0:8,0:8:21.07:0,21,1566	0/0:38,0:38:99:0,114,8642	0/0:15,0:15:45.15:0,45,3435	0/0:38,0:38:99:0,114,8001	0/0:16,0:16:48.16:0,48,3141	1/1:0,16:16:30.10:1462,30,0	0/0:36,0:36:99:0,108,8594	0/0:34,0:34:99:0,102,7579	0/0:22,0:22:63.21:0,63,4281	0/0:7,0:7:21.07:0,21,1495	0/0:66,0:66:99:0,199,14611	0/0:19,0:19:57.20:0,57,4411	0/0:9,0:9:24.08:0,24,1782	0/0:34,0:34:99:0,102,7895	0/0:15,0:15:45.15:0,45,3451	0/0:21,0:21:63.22:0,63,4463	0/0:23,0:23:66.23:0,66,4827	0/0:11,0:11:33.11:0,33,2353
chr10	96399626	.	TTTGA	T	7757.44	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.746;DP=769;FS=0.333;HRun=0;HaplotypeScore=124.3063;InbreedingCoeff=0.9999;MQ=79.82;MQ0=1;MQRankSum=-5.845;QD=46.73;ReadPosRankSum=-0.099;VQSLOD=5.4662;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:93.30:0,93,2319	0/0:12,0:12:36.12:0,36,943	0/0:19,0:19:42.14:0,42,1042	0/0:21,0:21:51.17:0,51,1194	0/0:32,0:32:93.30:0,93,2319	0/0:28,0:28:78.24:0,78,1930	0/0:15,0:15:45.15:0,45,1168	1/1:3,28:31:84.27:1458,84,0	0/0:24,0:24:69.24:0,69,1788	0/0:38,0:38:99:0,105,2662	0/0:25,0:25:72.25:0,72,1829	0/0:25,0:25:72.25:0,72,1859	0/0:23,0:23:63.22:0,63,1643	0/0:30,0:30:81.28:0,81,2121	0/0:43,0:43:99:0,126,3148	0/0:38,0:38:99:0,108,2703	0/0:21,0:21:60.21:0,60,1552	0/0:22,0:22:60.21:0,60,1552	1/1:2,16:18:48.14:813,48,0	1/1:0,34:33:93.28:1656,93,0	1/1:2,29:31:76.46:1380,76,0	0/0:32,0:32:90.28:0,90,2231	0/0:33,0:33:93.31:0,93,2324	0/0:27,0:27:78.27:0,78,2037	0/0:27,0:27:75.26:0,75,1900	0/0:32,0:32:90.30:0,90,2245	1/1:2,35:37:96.33:1742,96,0	1/1:0,15:15:39.13:709,39,0
chr10	96401909	.	AGG	A	2189.85	PASS	AB=0.828;AC=41;AF=0.732;AN=56;BaseQRankSum=-5.872;DP=425;FS=17.219;HRun=13;HaplotypeScore=60.2040;InbreedingCoeff=0.2780;MQ=80.26;MQ0=4;MQRankSum=-0.112;QD=6.44;ReadPosRankSum=3.383;VQSLOD=-0.7591;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:13,1:17:9.19:21,0,9	1/1:0,1:1:3:29,3,0	0/0:32,0:19:35.54:0,36,389	0/0:28,0:20:16.06:0,16,245	0/1:10,0:12:2.26:15,0,2	1/1:6,6:13:14.44:103,14,0	1/1:4,12:17:26.88:248,27,0	1/1:14,6:20:17.93:163,18,0	1/1:8,10:19:17.74:155,18,0	1/1:22,0:23:11.32:67,11,0	1/1:8,1:11:8.49:53,8,0	1/1:9,7:18:5.50:84,6,0	1/1:10,8:18:20.99:196,21,0	1/1:5,0:5:9:83,9,0	0/0:15,0:16:10.71:0,11,47	0/1:6,1:18:34.46:34,0,38	0/1:16,0:17:36.80:37,0,43	1/1:11,2:15:0.79:76,1,0	0/1:8,2:10:4.31:32,0,4	0/1:15,0:15:6.37:46,0,6	1/1:5,4:12:20.22:146,20,0	1/1:3,7:10:9:83,9,0	1/1:9,0:9:6.42:51,6,0	1/1:3,6:10:20.72:178,21,0	0/0:9,0:9:0.89:0,1,2	0/1:10,0:15:3.76:4,0,5	1/1:18,9:29:44.81:396,45,0	1/1:4,0:4:5.69:49,6,0
chr10	96402715	.	CGGTGCT	C	12001.82	PASS	AB=0.550;AC=43;AF=0.796;AN=54;BaseQRankSum=5.068;DP=512;FS=10.119;HRun=0;HaplotypeScore=117.2585;InbreedingCoeff=0.8185;MQ=63.21;MQ0=0;MQRankSum=-9.896;QD=28.31;ReadPosRankSum=1.916;VQSLOD=3.7998;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:75.23:0,75,2121	1/1:5,2:7:9.03:176,9,0	0/0:11,0:10:21.05:0,21,363	0/0:17,0:17:33.11:0,33,723	1/1:5,12:17:8.77:60,9,0	1/1:5,12:17:33.11:710,33,0	1/1:8,25:33:42.08:909,42,0	1/1:5,7:12:21.06:392,21,0	1/1:1,28:29:60.21:1301,60,0	1/1:3,8:11:24.08:507,24,0	0/0:0,9:9:0:0,0,0	1/1:5,26:32:51.14:1101,51,0	1/1:4,15:19:35.70:781,36,0	1/1:1,22:23:51.17:1075,51,0	1/1:4,14:18:27.09:585,27,0	0/0:14,0:14:39.13:0,39,1284	1/1:8,25:33:37.37:801,37,0	1/1:3,19:22:33.11:687,33,0	1/1:5,11:16:29.82:474,30,0	./.	1/1:17,30:47:6.02:130,6,0	1/1:2,6:8:6.02:125,6,0	0/1:2,9:11:0:0,0,0	1/1:5,21:26:24.08:492,24,0	1/1:3,10:13:15.05:324,15,0	1/1:1,11:12:32.98:600,33,0	1/1:2,13:15:33.07:671,33,0	1/1:3,0:3:6.02:98,6,0
chr10	96402719	.	GCTGGT	G	3960.60	PASS	AB=0.986;AC=27;AF=0.482;AN=56;BaseQRankSum=13.000;DP=480;FS=9.412;HRun=0;HaplotypeScore=130.3948;InbreedingCoeff=-0.1714;MQ=65.14;MQ0=0;MQRankSum=-12.902;QD=10.48;ReadPosRankSum=9.407;VQSLOD=0.7117;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.30:0,87,2542	0/1:4,0:4:27.66:48,0,28	0/0:16,0:12:36.12:0,36,797	0/0:17,0:17:50.90:0,51,1144	0/0:16,0:16:14.89:0,15,134	0/1:14,1:15:74.72:246,0,75	0/1:31,0:30:99:305,0,159	0/1:9,0:9:66.80:109,0,67	1/1:29,0:29:24.04:485,24,0	0/1:10,1:11:84.01:165,0,84	0/1:9,0:9:0:0,0,0	0/1:30,1:31:56.87:382,0,57	0/1:18,0:18:71.49:271,0,71	1/1:23,0:23:46.24:415,46,0	0/1:17,1:18:99:196,0,115	0/0:14,0:14:42.14:0,42,1338	0/1:30,0:30:99:249,0,147	0/1:22,0:22:43.60:225,0,44	0/1:14,0:14:99:99,0,121	0/1:3,0:3:3.02:3,0,69	0/1:41,0:41:13.61:14,0,353	1/1:6,0:6:5.98:48,6,0	0/0:10,0:10:2.61:0,3,38	0/1:25,0:25:51.87:155,0,52	1/1:11,0:11:14.99:129,15,0	1/1:11,0:11:5.35:172,5,0	0/1:15,0:15:57.62:225,0,58	0/1:2,0:2:1.18:21,0,1
chr10	96403632	.	A	ATTT	950.90	PASS	AB=0.962;AC=10;AF=0.179;AN=56;BaseQRankSum=4.104;DP=411;FS=0.000;HRun=14;HaplotypeScore=68.1809;InbreedingCoeff=0.6654;MQ=58.34;MQ0=2;MQRankSum=-1.015;QD=9.51;ReadPosRankSum=-0.022;VQSLOD=-0.2700;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:23:4.61:227,5,0	0/0:4,0:4:6:0,6,62	0/1:11,0:6:1.82:2,0,25	0/0:8,0:5:8.49:0,8,64	0/0:18,0:20:41.84:0,42,418	0/0:24,0:26:55.53:0,56,569	0/0:13,0:13:14.63:0,15,145	0/0:28,0:30:47.86:0,48,508	0/0:8,0:8:8.74:0,9,92	0/0:10,0:11:14.68:0,15,153	0/0:10,0:10:17.78:0,18,173	0/0:15,0:15:18.21:0,18,349	0/0:16,0:16:26.40:0,26,259	0/0:5,0:6:11.78:0,12,110	0/0:9,0:9:23.99:0,24,246	1/1:4,1:12:20.92:187,21,0	1/1:10,8:23:28.22:328,28,0	1/1:8,7:17:24:354,24,0	0/0:13,0:14:20.66:0,21,201	0/0:13,0:13:4.63:0,5,188	0/0:15,0:15:26.78:0,27,264	0/0:5,0:5:2.86:0,3,31	0/1:10,0:11:3.17:3,0,149	0/0:12,0:13:14.14:0,14,139	0/0:13,0:14:22.51:0,23,244	0/0:20,0:20:48.04:0,48,493	0/0:20,0:20:35.73:0,36,369	0/0:19,0:20:41.84:0,42,418
chr10	96403839	.	CT	C	622.59	PASS	AB=0.817;AC=11;AF=0.196;AN=56;BaseQRankSum=-0.727;DP=453;FS=2.059;HRun=14;HaplotypeScore=70.8761;InbreedingCoeff=0.3115;MQ=59.40;MQ0=3;MQRankSum=5.513;QD=4.54;ReadPosRankSum=2.659;VQSLOD=1.7189;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,13:32:38.69:244,39,0	0/0:3,0:5:9.72:0,10,78	0/0:11,1:8:3.48:0,3,36	0/0:14,0:8:3.46:0,3,25	0/0:10,0:18:19.16:0,19,194	0/0:14,2:16:3.89:0,4,167	0/0:19,1:20:10.36:0,10,301	0/0:11,0:15:26.19:0,26,135	0/1:9,2:11:2.51:3,0,93	0/1:11,3:14:34.80:35,0,122	0/0:6,0:8:11.85:0,12,98	0/0:19,0:19:38.94:0,39,341	0/1:13,1:13:5.62:6,0,83	0/0:17,0:16:35.90:0,36,306	0/0:7,0:12:2.04:0,2,94	0/1:3,4:7:19.29:32,0,19	1/1:10,21:32:12.60:271,13,0	1/1:7,11:17:27.80:176,28,0	0/0:20,0:26:40.88:0,41,240	0/0:2,0:3:2.80:0,3,13	0/0:12,0:15:12.16:0,12,55	0/1:4,1:5:8.70:9,0,59	0/0:11,2:13:2.48:0,2,153	0/0:20,2:22:12.44:0,12,252	0/0:5,0:13:11.85:0,12,98	0/0:11,0:16:17.40:0,17,103	0/0:7,0:27:35.33:0,35,174	0/0:9,0:15:20.93:0,21,110
chr10	96404791	.	T	TA	2476.95	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-8.130;DP=582;FS=1.980;HRun=9;HaplotypeScore=60.3974;InbreedingCoeff=0.8789;MQ=71.30;MQ0=4;MQRankSum=0.702;QD=18.21;ReadPosRankSum=-1.382;VQSLOD=3.4225;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:98.94:0,99,853	1/1:1,7:7:12.03:130,12,0	0/1:30,0:18:11.72:12,0,257	0/0:26,0:18:12.66:0,13,176	1/1:2,28:30:81.22:894,81,0	0/0:21,0:21:56.94:0,57,487	0/0:15,0:15:38.94:0,39,331	0/0:32,0:32:62.84:0,63,535	0/0:21,0:21:56.97:0,57,492	0/0:28,0:28:68.97:0,69,599	0/0:18,0:18:44.98:0,45,390	0/0:13,0:13:26.98:0,27,234	0/0:24,0:24:62.97:0,63,547	0/0:14,0:14:41.98:0,42,361	1/1:1,19:20:48.13:531,48,0	0/0:17,0:17:41.99:0,42,365	0/0:29,0:28:68.98:0,69,599	0/0:11,0:11:17.97:0,18,152	0/0:16,0:16:47.97:0,48,413	0/0:11,0:11:32.99:0,33,286	0/0:14,0:14:38.99:0,39,338	0/0:14,0:14:38.96:0,39,331	0/0:21,0:21:53.98:0,54,468	0/0:26,1:27:43.67:0,44,597	1/1:3,16:19:33.09:365,33,0	1/1:7,22:29:66.16:721,66,0	0/0:23,0:24:56:0,56,474	0/0:13,0:13:35.98:0,36,312
chr10	96405301	.	G	GT	6629.94	PASS	AB=0.923;AC=23;AF=0.411;AN=56;BaseQRankSum=-14.137;DP=556;FS=12.419;HRun=6;HaplotypeScore=56.0762;InbreedingCoeff=0.9252;MQ=74.21;MQ0=0;MQRankSum=-0.528;QD=28.95;ReadPosRankSum=1.758;VQSLOD=4.6763;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:81.15:0,81,817	0/0:7,0:7:18.04:0,18,184	0/0:19,0:19:44.89:0,45,421	0/0:7,0:6:12:0,12,113	0/0:22,0:22:60.09:0,60,601	1/1:0,33:33:90.29:1132,90,0	1/1:1,15:16:33.11:415,33,0	0/0:32,0:32:75.15:0,75,758	1/1:1,22:24:66.21:829,66,0	1/1:4,15:19:48.14:590,48,0	1/1:1,5:6:15.05:189,15,0	1/1:2,20:22:60.19:752,60,0	1/1:4,30:35:90.29:1131,90,0	1/1:1,18:19:45.14:566,45,0	0/0:24,0:24:72.10:0,72,707	0/0:22,0:22:66.10:0,66,656	0/0:26,0:26:66.15:0,66,673	0/0:20,0:20:45.09:0,45,459	0/0:18,0:18:39.06:0,39,389	0/0:24,0:24:66.14:0,66,673	0/0:8,0:8:24.04:0,24,237	1/1:1,12:13:30.10:377,30,0	1/1:1,7:8:24.08:300,24,0	1/1:0,10:10:27.09:340,27,0	0/0:24,0:24:63.09:0,63,630	0/1:22,2:24:9.33:9,0,546	0/0:28,0:28:81.18:0,81,825	0/0:14,0:14:39.09:0,39,398
chr10	96405350	.	C	CAT	3967.54	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-7.125;DP=481;FS=10.131;HRun=0;HaplotypeScore=68.8859;InbreedingCoeff=0.9647;MQ=75.94;MQ0=0;MQRankSum=-1.195;QD=46.68;ReadPosRankSum=3.044;VQSLOD=4.1900;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:29:69.24:1272,69,0	0/0:5,0:5:15.05:0,15,221	0/0:13,0:13:25.58:0,26,464	0/0:15,0:15:31.65:0,32,424	0/0:21,0:20:57.17:0,57,801	0/0:22,0:22:63.19:0,63,890	0/0:10,0:10:24.08:0,24,353	0/0:33,0:33:99:0,99,1423	0/0:19,0:19:54.14:0,54,771	0/0:15,0:15:25.15:0,25,598	0/0:8,0:8:24.08:0,24,353	0/0:23,0:23:66.22:0,66,966	0/0:27,0:27:75.22:0,75,1049	0/0:10,0:10:30.10:0,30,441	0/0:24,0:24:69.22:0,69,998	1/1:0,13:13:36.12:674,36,0	1/1:0,22:23:60.21:1123,60,0	1/1:0,17:20:48.16:899,48,0	0/0:20,0:20:54.17:0,54,778	0/0:18,0:18:54.15:0,54,738	0/0:12,0:12:36.10:0,36,491	0/0:13,0:13:39.10:0,39,535	0/0:2,0:2:6.02:0,6,88	0/0:14,0:14:36.08:0,36,506	0/0:15,0:15:45.08:0,45,600	0/0:15,0:15:42.12:0,42,583	0/0:30,0:30:87.26:0,87,1227	0/0:12,0:12:27.04:0,27,337
chr10	96405542	.	T	TA	466.77	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=-1.251;DP=271;FS=17.530;HRun=3;HaplotypeScore=36.3497;InbreedingCoeff=0.4823;MQ=51.07;MQ0=9;MQRankSum=2.737;QD=8.05;ReadPosRankSum=2.872;VQSLOD=-0.5721;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:15.84:0,16,155	0/0:1,0:1:2.94:0,3,18	1/1:8,0:3:3:26,3,0	0/0:2,0:1:0.89:0,1,2	0/0:7,0:6:11.77:0,12,73	0/0:13,0:13:11.06:0,11,78	0/0:5,0:5:12.20:0,12,70	0/0:30,0:25:62.74:0,63,552	0/0:6,0:6:1.83:0,2,4	0/0:12,0:11:27.92:0,28,190	0/0:3,0:3:1.96:0,2,16	0/0:11,0:11:5.48:0,5,39	0/0:8,0:8:4.97:0,5,51	0/0:4,0:4:9.26:0,9,52	0/0:6,0:6:14.66:0,15,90	0/1:9,0:9:2.41:2,0,29	1/1:6,15:21:26.02:390,26,0	1/1:4,12:16:19.32:175,19,0	0/0:19,0:18:38.70:0,39,297	0/0:4,0:4:6.41:0,6,43	0/0:5,0:5:14.87:0,15,136	0/0:3,0:3:2.94:0,3,18	0/0:7,0:7:5.88:0,6,37	0/1:3,0:3:0.97:1,0,13	0/0:11,0:11:23.51:0,24,145	0/0:8,0:7:17.72:0,18,116	0/0:10,0:10:20.63:0,21,141	0/0:21,0:21:20.68:0,21,171
chr10	96409179	.	GTGC	G	2079.68	PASS	AB=0.950;AC=12;AF=0.222;AN=54;BaseQRankSum=8.997;DP=648;FS=12.136;HRun=0;HaplotypeScore=93.6990;InbreedingCoeff=0.6672;MQ=71.22;MQ0=2;MQRankSum=-1.871;QD=11.88;ReadPosRankSum=-0.714;VQSLOD=2.4581;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:30.10:0,30,578	0/0:4,0:4:6.02:0,6,120	0/0:15,0:14:14.72:0,15,221	0/1:31,0:28:1.18:1,0,476	0/0:19,0:19:9.03:0,9,169	0/0:12,0:12:12.04:0,12,230	0/0:46,0:46:99:0,105,2070	1/1:16,3:19:9.03:127,9,0	0/0:19,0:19:57.20:0,57,1132	0/0:16,0:16:6.49:0,6,104	0/0:11,0:11:6.02:0,6,107	0/0:31,1:32:39.12:0,39,1505	0/0:28,1:29:30.09:0,30,1341	0/0:29,0:29:66.23:0,66,1307	0/0:28,0:28:63.22:0,63,1242	0/0:29,0:29:69.24:0,69,1363	0/0:43,0:43:99:0,105,2093	0/0:29,0:29:78.27:0,78,1549	1/1:4,2:6:5.94:62,6,0	./.	1/1:39,39:78:84.28:1180,84,0	0/0:10,0:10:2.99:0,3,24	0/1:8,1:9:33.13:33,0,93	0/0:34,0:34:78.27:0,78,1564	0/0:15,0:15:18.06:0,18,360	0/0:14,0:14:9.02:0,9,147	1/1:6,21:27:48.16:671,48,0	1/1:0,5:5:12.04:169,12,0
chr10	96412816	.	TA	T	777.29	PASS	AC=12;AF=0.240;AN=50;BaseQRankSum=2.944;DP=189;FS=1.724;HRun=11;HaplotypeScore=19.6056;InbreedingCoeff=0.7725;MQ=54.54;MQ0=11;MQRankSum=-3.251;QD=14.95;ReadPosRankSum=-0.854;VQSLOD=2.3433;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:17.96:0,18,177	0/0:2,0:2:6.02:0,6,64	0/0:23,0:4:0.89:0,1,2	0/0:18,0:4:5.66:0,6,43	0/0:14,0:14:39.10:0,39,414	0/0:4,0:4:11.96:0,12,114	0/0:2,0:2:5.97:0,6,52	1/1:2,12:12:15.99:228,16,0	0/0:5,0:5:15.04:0,15,159	0/0:5,0:5:15.04:0,15,160	0/0:7,0:7:21.05:0,21,224	0/0:4,0:4:12.01:0,12,119	0/0:1,0:1:3.01:0,3,32	0/0:3,0:3:9.02:0,9,96	0/0:10,0:10:17.62:0,18,246	0/0:4,0:4:12.03:0,12,128	0/0:8,0:8:18.04:0,18,191	0/0:9,0:9:27.07:0,27,288	1/1:4,5:5:14.98:123,15,0	1/1:0,2:2:5.99:49,6,0	1/1:2,2:3:5.99:49,6,0	./.	./.	./.	0/0:4,0:4:9.02:0,9,96	0/0:6,0:6:18.05:0,18,192	1/1:0,12:12:32.96:271,33,0	1/1:0,11:11:26.97:222,27,0
chr10	96413118	.	T	TAATA	3484.04	PASS	AC=10;AF=0.200;AN=50;BaseQRankSum=-5.452;DP=340;FS=3.636;HRun=0;HaplotypeScore=63.7279;InbreedingCoeff=0.8323;MQ=51.84;MQ0=5;MQRankSum=-5.795;QD=35.55;ReadPosRankSum=-0.049;VQSLOD=3.4541;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:33:0,33,453	0/0:5,0:5:3.01:0,3,49	./.	0/0:5,0:3:9.03:0,9,133	0/0:19,0:19:48.07:0,48,705	0/0:13,0:13:33.11:0,33,542	0/0:6,0:6:9.03:0,9,146	1/1:19,15:33:68.69:1106,69,0	0/0:4,0:4:12:0,12,168	0/0:21,0:21:39.11:0,39,593	0/0:13,0:13:39.06:0,39,586	0/0:9,0:9:18.05:0,18,271	0/0:7,0:7:15.05:0,15,240	0/0:11,0:11:21.06:0,21,323	0/0:11,0:11:21.06:0,21,311	0/0:10,0:10:18.05:0,18,261	0/0:21,0:21:39.13:0,39,639	0/0:23,0:23:51.10:0,51,758	1/1:9,4:15:21.96:528,22,0	1/1:0,4:6:12.04:292,12,0	./.	./.	0/0:3,0:3:3.01:0,3,49	0/0:1,0:1:2.97:0,3,20	0/0:15,0:15:33.10:0,33,499	0/0:19,0:19:42.14:0,42,668	1/1:6,8:14:24.08:584,24,0	1/1:5,18:26:14.42:974,14,0
chr10	96414816	.	GGTTT	G	10217.95	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.848;DP=584;FS=1.476;HRun=0;HaplotypeScore=99.8404;InbreedingCoeff=0.9998;MQ=79.82;MQ0=0;MQRankSum=-7.746;QD=45.21;ReadPosRankSum=3.706;VQSLOD=4.9581;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,44:45:93.32:1735,93,0	0/0:16,0:16:45.15:0,45,1197	0/0:35,0:35:93.31:0,93,2368	0/0:19,0:19:51.17:0,51,1195	0/0:18,0:18:51.18:0,51,1350	0/0:27,0:27:75.26:0,75,1962	0/0:22,0:22:60.21:0,60,1495	1/1:3,20:23:60.16:1024,60,0	0/0:20,0:20:57.18:0,57,1455	0/0:21,0:21:57.20:0,57,1521	0/0:16,0:16:42.14:0,42,1120	0/0:20,0:20:60.16:0,60,1470	0/0:27,0:27:81.28:0,81,2126	0/0:13,0:13:39.13:0,39,1024	0/0:20,0:20:60.21:0,60,1563	1/1:2,19:21:54.19:1008,54,0	1/1:1,19:20:45.15:839,45,0	1/1:1,19:20:51.17:951,51,0	1/1:3,21:24:63.20:1137,63,0	1/1:0,15:15:39.13:727,39,0	1/1:2,12:14:36.12:672,36,0	0/0:14,0:14:36.12:0,36,935	0/0:12,0:12:33.11:0,33,874	0/0:15,0:15:42.11:0,42,1000	0/0:20,0:20:51.62:0,52,1295	0/0:23,0:23:60.20:0,60,1508	1/1:2,31:33:81.28:1510,81,0	1/1:0,11:11:33.11:616,33,0
chr10	96415218	.	A	AAAAAAAAAAAATAAAAT	7146.36	PASS	AB=0.519;AC=19;AF=0.339;AN=56;BaseQRankSum=8.628;DP=527;FS=2.040;HRun=0;HaplotypeScore=208.0408;InbreedingCoeff=0.8787;MQ=66.11;MQ0=8;MQRankSum=-10.774;QD=48.29;ReadPosRankSum=-4.516;VQSLOD=3.4277;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:3,6:18:12.04:821,12,0	0/0:13,0:13:36:0,36,1086	0/0:21,0:13:7.05:0,7,224	0/0:22,0:15:28.18:0,28,357	0/0:25,0:25:48.54:0,49,1816	0/0:19,0:19:54.17:0,54,2011	0/0:18,0:17:48.05:0,48,1580	1/1:18,0:26:62.92:1234,63,0	0/0:20,0:20:45.15:0,45,1780	0/0:28,0:28:72.02:0,72,2356	0/0:22,0:22:45.03:0,45,1819	0/0:24,0:24:50.68:0,51,1962	0/0:21,0:20:53.36:0,53,1930	0/0:19,0:19:45.11:0,45,1868	0/0:16,0:16:45.15:0,45,1828	1/1:6,1:7:12.03:496,12,0	1/1:1,0:20:21.07:932,21,0	0/1:1,0:14:79.96:378,0,80	1/1:9,0:10:29.91:715,30,0	1/1:18,0:18:41.94:871,42,0	1/1:8,0:8:16.80:338,17,0	0/0:10,0:10:27.06:0,27,1001	0/0:22,0:22:59.92:0,60,2345	0/0:31,0:30:72.23:0,72,2801	0/0:19,0:19:38.54:0,39,1188	0/0:29,0:28:75.05:0,75,2814	1/1:20,0:17:38.69:1090,39,0	1/1:4,0:4:6.02:271,6,0
chr10	96416552	.	GAGGAATCTCA	G	1515.05	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.654;DP=721;FS=0.000;HRun=0;HaplotypeScore=209.5920;InbreedingCoeff=0.9960;MQ=85.71;MQ0=0;MQRankSum=-7.008;QD=42.08;ReadPosRankSum=2.374;VQSLOD=2.8037;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,4919	0/0:9,0:9:27.09:0,27,1371	0/0:23,0:23:69.23:0,69,2903	0/0:25,0:25:66.23:0,66,3093	0/0:22,0:22:57.20:0,57,2830	0/0:32,0:32:90.26:0,90,4389	0/0:17,0:17:51.18:0,51,2633	0/0:46,0:46:99:0,129,6264	0/0:27,0:27:81.26:0,81,4095	0/0:34,0:34:96.33:0,96,4953	0/0:18,0:18:54.16:0,54,2425	0/0:30,0:30:90.31:0,90,4702	0/0:28,0:28:84.29:0,84,4167	0/0:26,0:26:72.25:0,72,3632	0/0:31,0:31:93.32:0,93,4728	0/0:28,0:28:78.27:0,78,3975	1/1:4,16:20:30.06:946,30,0	1/1:5,11:16:21.06:690,21,0	0/0:13,0:13:36.12:0,36,1751	0/0:23,0:23:63.22:0,63,3249	0/0:43,0:43:99:0,120,6120	0/0:17,0:17:51.18:0,51,2595	0/0:25,0:25:75.21:0,75,3506	0/0:33,0:33:96.30:0,96,4756	0/0:27,0:27:78.27:0,78,3986	0/0:34,0:34:99:0,99,4982	0/0:29,0:29:87.26:0,87,4257	0/0:10,0:10:24.08:0,24,1099
chr10	96418270	.	G	GCTGCT	561.54	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=4.277;DP=1021;FS=8.982;HRun=0;HaplotypeScore=304.2101;InbreedingCoeff=0.6838;MQ=80.66;MQ0=6;MQRankSum=-0.357;QD=3.98;ReadPosRankSum=-3.017;VQSLOD=0.7063;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,29:44:2.83:86,3,0	0/0:11,0:11:21.03:0,21,349	0/1:61,0:43:5.37:5,0,436	0/0:103,0:73:5.70:0,6,704	0/0:25,0:25:60.15:0,60,1043	0/0:26,0:26:60.21:0,60,1098	0/0:39,0:39:63.05:0,63,1088	0/0:33,0:33:37.84:0,38,615	0/0:31,0:31:78.10:0,78,1378	0/0:29,0:29:51.17:0,51,893	0/0:15,0:15:33.11:0,33,608	0/0:30,0:30:54.19:0,54,984	0/0:36,0:36:67.98:0,68,1221	0/0:38,0:38:72.19:0,72,1212	0/0:32,0:32:54.19:0,54,996	1/1:11,24:36:20.91:582,21,0	0/0:34,0:34:69.01:0,69,1056	0/0:28,0:28:60.21:0,60,1109	0/0:26,0:26:31.29:0,31,468	0/0:24,0:24:42.14:0,42,766	0/0:96,0:96:99:0,219,3622	0/0:29,0:29:54:0,54,970	0/0:31,0:31:69.17:0,69,1117	0/0:65,0:65:99:0,145,2533	0/0:26,0:26:53.92:0,54,962	0/0:34,0:34:84.23:0,84,1470	0/0:22,0:22:48.16:0,48,868	0/0:17,0:17:41.95:0,42,670
chr10	96418372	.	ACTGCTCTGCT	A	6948.77	PASS	AB=0.859;AC=34;AF=0.607;AN=56;BaseQRankSum=3.757;DP=955;FS=0.949;HRun=0;HaplotypeScore=311.1275;InbreedingCoeff=0.4830;MQ=77.16;MQ0=21;MQRankSum=-5.395;QD=12.45;ReadPosRankSum=1.665;VQSLOD=2.9546;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:26:34.83:58,0,35	0/0:9,0:9:17.82:0,18,630	0/0:85,0:50:49.54:0,50,980	0/0:109,0:54:35.70:0,36,576	0/0:37,0:37:87.24:0,87,3164	1/1:4,18:22:9.03:238,9,0	1/1:11,39:50:15.02:387,15,0	1/1:7,14:21:42.11:694,42,0	1/1:4,30:34:18.06:531,18,0	1/1:6,24:30:65.44:1508,65,0	1/1:3,12:15:2.64:91,3,0	1/1:5,31:36:12.28:368,12,0	1/1:4,25:29:21.06:565,21,0	1/1:9,29:38:2.99:92,3,0	0/0:42,0:42:87.28:0,87,3686	0/1:29,0:29:65.88:527,0,66	0/1:20,0:20:27.10:27,0,148	0/1:14,0:14:36.35:36,0,198	1/1:18,10:26:2.06:546,2,0	1/1:11,2:13:24.06:522,24,0	0/1:25,60:84:0:0,0,0	1/1:6,22:28:1.86:71,2,0	0/1:4,13:17:0.14:0,0,0	0/0:18,41:59:2.88:0,3,17	0/0:19,0:19:39.13:0,39,1706	0/0:33,0:33:78.24:0,78,2273	1/1:0,18:18:20.80:594,21,0	1/1:0,4:4:3.01:92,3,0
chr10	96418392	.	TCTGCTCTGCA	T	5428.11	PASS	AB=0.996;AC=23;AF=0.411;AN=56;BaseQRankSum=7.223;DP=1010;FS=2.847;HRun=0;HaplotypeScore=326.4740;InbreedingCoeff=-0.1932;MQ=80.54;MQ0=29;MQRankSum=-4.090;QD=8.85;ReadPosRankSum=4.787;VQSLOD=2.9084;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,3:25:26.73:326,27,0	0/0:10,0:10:14.84:0,15,627	0/0:119,0:66:16.23:0,16,844	0/1:157,0:69:64.18:64,0,647	0/0:39,0:39:86.68:0,87,2792	0/1:21,0:21:14.51:171,0,15	0/1:49,0:49:99:271,0,163	0/1:16,0:16:15.02:308,0,15	0/1:34,0:34:47.91:394,0,48	0/1:33,0:33:99:964,0,110	0/1:14,0:14:13.98:68,0,14	0/1:37,0:37:99:265,0,120	0/1:30,0:30:88.98:405,0,89	0/1:38,0:38:52.85:53,0,125	0/0:47,0:47:99:0,100,3648	1/1:4,28:32:24.08:708,24,0	0/1:16,0:16:44.78:79,0,45	0/1:13,0:14:86.22:86,0,94	0/1:19,0:17:56.39:387,0,56	0/1:10,0:10:0.93:331,0,1	0/0:77,0:76:14.41:0,14,122	1/1:22,0:22:2.93:54,3,0	0/1:14,0:14:0:0,0,0	0/0:55,0:55:17.44:0,17,131	0/0:18,0:18:40.94:0,41,1616	0/0:32,0:32:65.08:0,65,1833	0/1:21,0:21:36.23:435,0,36	0/1:7,0:7:48.96:60,0,49
chr10	96418429	.	A	ACTGCTCTGCT	2088.32	PASS	AB=0.886;AC=14;AF=0.250;AN=56;BaseQRankSum=4.008;DP=849;FS=19.118;HRun=0;HaplotypeScore=350.1744;InbreedingCoeff=0.5520;MQ=87.04;MQ0=10;MQRankSum=-1.501;QD=6.23;ReadPosRankSum=-2.513;VQSLOD=0.8134;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:41.71:0,42,819	1/1:9,0:9:15.04:227,15,0	0/1:77,0:46:55.46:55,0,108	0/1:108,0:66:99:174,0,256	1/1:22,0:22:8.99:76,9,0	0/0:13,0:13:27.03:0,27,620	0/0:51,0:51:81.24:0,81,2195	0/0:16,0:16:36.06:0,36,591	0/0:28,0:28:38.94:0,39,897	0/0:25,0:25:50.15:0,50,1076	0/0:12,0:10:14.90:0,15,369	0/0:43,0:43:53.51:0,54,1401	0/0:31,0:31:48.52:0,49,1198	0/0:29,0:29:35.97:0,36,939	1/1:45,0:45:14.23:149,14,0	0/0:29,0:29:25.81:0,26,314	0/1:7,11:23:99:416,0,146	0/1:10,0:10:99:422,0,182	0/0:9,0:9:21.06:0,21,511	0/0:9,0:9:5.87:0,6,113	0/0:85,0:85:99:0,120,2767	0/0:20,0:20:20.64:0,21,553	0/0:14,0:14:16.30:0,16,441	0/0:49,0:49:50.64:0,51,1472	1/1:15,0:15:5.82:52,6,0	1/1:20,0:20:51.78:693,52,0	0/0:15,0:15:20.96:0,21,445	0/0:8,0:8:21.07:0,21,518
chr10	96418449	.	T	TCTGCA	1677.31	PASS	AB=0.839;AC=10;AF=0.179;AN=56;BaseQRankSum=3.114;DP=883;FS=5.259;HRun=0;HaplotypeScore=305.7905;InbreedingCoeff=0.2813;MQ=91.46;MQ0=8;MQRankSum=-1.050;QD=4.85;ReadPosRankSum=-2.733;VQSLOD=1.4825;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:50.10:0,50,866	0/1:1,8:9:15.34:343,0,15	0/1:77,0:47:15.03:15,0,354	0/1:127,0:79:45.76:46,0,790	0/0:2,15:19:0:0,0,2	0/0:13,0:13:30.01:0,30,518	0/0:51,0:51:99:0,111,2199	0/0:22,0:22:66.17:0,66,1087	0/0:24,0:24:33.03:0,33,681	0/0:22,0:22:63.10:0,63,1151	0/0:11,0:9:21.07:0,21,396	0/0:39,0:39:63.13:0,63,1225	0/0:35,0:35:73.06:0,73,1216	0/0:26,0:26:38.46:0,38,808	1/1:2,40:46:4.22:104,4,0	0/0:28,0:28:47.51:0,48,592	0/1:31,0:31:76.80:77,0,366	0/1:13,0:14:39.62:40,0,296	0/0:18,0:18:48.13:0,48,901	0/0:12,0:12:2.32:0,2,62	0/0:82,0:82:99:0,131,2692	0/0:19,0:19:23.81:0,24,503	0/0:15,0:15:19.31:0,19,380	0/0:47,0:47:57.03:0,57,1156	0/1:1,12:13:0.08:0,0,0	1/1:5,23:28:20.92:1194,21,0	0/0:16,0:16:33.04:0,33,583	0/0:8,0:8:21.03:0,21,397
chr10	96418484	.	ACTGCTCTGCACTGCTCTGCT	A	12286.30	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=-5.792;DP=854;FS=0.000;HRun=0;HaplotypeScore=417.6043;InbreedingCoeff=0.8488;MQ=86.72;MQ0=24;MQRankSum=0.452;QD=29.05;ReadPosRankSum=1.754;VQSLOD=2.1618;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:58.65:0,59,1865	0/0:8,0:8:11.85:0,12,235	0/0:86,0:46:39.12:0,39,786	0/0:162,0:77:22.07:0,22,499	0/0:19,0:19:23.89:0,24,894	1/1:13,0:13:30.05:565,30,0	1/1:30,0:30:56.83:865,57,0	1/1:8,18:25:50.96:555,51,0	1/1:20,0:20:38.42:792,38,0	1/1:21,0:21:51.07:1129,51,0	1/1:9,0:8:14.93:124,15,0	1/1:25,0:25:50.70:1130,51,0	1/1:28,0:28:48.53:967,49,0	1/1:23,0:23:35.72:779,36,0	0/0:43,0:43:41.67:0,42,2030	0/1:38,0:38:3.70:4,0,2593	0/0:27,0:27:4.76:0,5,336	0/1:15,0:15:1.11:1,0,473	1/1:1,13:11:30.07:592,30,0	1/1:0,14:14:2.87:19,3,0	1/1:62,0:62:99:2047,122,0	1/1:15,0:15:30.02:545,30,0	1/1:10,0:10:21.02:407,21,0	1/1:36,0:36:44.28:774,44,0	0/0:19,0:19:30.05:0,30,1138	0/0:26,0:26:69.02:0,69,2008	1/1:12,0:12:20.95:407,21,0	1/1:12,0:12:27.04:584,27,0
chr10	96418532	.	GCTCTA	G	689.51	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=9.686;DP=959;FS=2.138;HRun=0;HaplotypeScore=272.7533;InbreedingCoeff=0.4178;MQ=86.32;MQ0=21;MQRankSum=-2.218;QD=6.05;ReadPosRankSum=0.163;VQSLOD=2.2270;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:80.85:0,81,1476	0/0:12,0:12:36:0,36,440	0/0:117,0:69:68.69:0,69,1031	0/0:177,0:91:39.84:0,40,1045	0/0:24,0:24:68.85:0,69,1161	0/1:17,0:17:9.77:10,0,178	0/0:39,0:39:41.78:0,42,495	0/0:21,0:21:21.38:0,21,348	0/0:30,0:30:16.93:0,17,233	0/0:33,0:33:44.80:0,45,514	0/0:11,0:11:17.32:0,17,147	0/0:30,0:30:48.82:0,49,440	0/0:24,0:24:11.11:0,11,182	0/0:29,0:29:24.12:0,24,241	0/0:44,0:44:90.11:0,90,1949	0/0:33,0:33:71.58:0,72,1874	1/1:9,5:14:9.46:206,9,0	1/1:12,6:17:35.92:576,36,0	0/1:15,0:14:5.97:6,0,121	0/0:19,0:19:21.98:0,22,158	0/0:50,0:49:67.95:0,68,620	0/0:19,0:19:11.82:0,12,305	0/0:28,0:28:49.98:0,50,550	0/1:41,0:41:7.49:7,0,309	0/0:22,0:22:63.08:0,63,1227	0/0:34,0:34:99:0,102,1833	0/0:13,0:13:22.89:0,23,163	0/1:9,0:9:20.46:20,0,55
chr10	96418553	.	CGCTGCTCTGT	C	223.85	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.044;DP=912;FS=1.789;HRun=0;HaplotypeScore=334.5370;InbreedingCoeff=0.9532;MQ=95.22;MQ0=7;MQRankSum=-2.582;QD=7.00;ReadPosRankSum=-5.244;VQSLOD=0.5383;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:77.88:0,78,3498	0/0:14,0:14:42.14:0,42,1799	0/0:68,0:61:34.28:0,34,2802	0/0:112,0:87:76.42:0,76,3562	0/0:24,0:24:66.23:0,66,3032	0/0:20,0:20:44.94:0,45,2201	0/0:43,0:43:91.04:0,91,4248	0/0:19,0:19:48.16:0,48,1807	0/0:38,0:38:87.24:0,87,3518	0/0:37,0:37:99:0,108,4742	0/0:19,0:19:45.15:0,45,1941	0/0:35,0:35:84.29:0,84,3839	0/0:22,0:22:45.38:0,45,2061	0/0:40,0:40:68.83:0,69,3254	0/0:40,0:40:87.30:0,87,4036	0/0:34,0:34:81.21:0,81,3313	1/1:13,1:14:8.10:100,8,0	1/1:6,12:18:14.91:233,15,0	0/0:16,0:16:39.13:0,39,1792	0/0:19,0:19:36.12:0,36,1789	0/0:51,0:51:99:0,102,4857	0/0:23,0:23:63.22:0,63,2819	0/0:30,0:30:84.29:0,84,4026	0/0:51,0:51:93.25:0,93,4340	0/0:27,0:27:72.23:0,72,3047	0/0:35,0:35:99:0,102,4840	0/0:13,0:13:36.08:0,36,1475	0/0:11,0:11:33.11:0,33,1534
chr10	96423708	.	AAAAAAAGAAC	A	466.95	PASS	AB=0.947;AC=8;AF=0.148;AN=54;BaseQRankSum=5.096;DP=360;FS=9.560;HRun=0;HaplotypeScore=98.4339;InbreedingCoeff=-0.1946;MQ=39.24;MQ0=32;MQRankSum=-2.524;QD=3.36;ReadPosRankSum=-1.311;VQSLOD=0.9449;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,1:24:99:330,0,251	0/1:6,0:6:4.42:4,0,64	0/0:2,0:1:3.01:0,3,42	./.	0/1:16,1:17:52.39:52,0,219	0/0:11,0:10:21.86:0,22,427	0/0:15,0:11:27.02:0,27,426	0/0:13,0:12:14.51:0,15,287	0/0:3,0:3:5.91:0,6,55	0/0:14,0:12:8.96:0,9,218	0/0:17,0:16:30.96:0,31,426	0/0:10,0:10:14.75:0,15,181	0/0:10,0:10:23.90:0,24,435	0/0:11,0:11:21.07:0,21,334	0/1:14,0:14:53.55:54,0,333	0/1:9,9:18:94.64:95,0,207	0/1:22,0:12:14.73:15,0,267	0/0:22,0:18:31.32:0,31,699	0/0:14,0:13:28.56:0,29,419	0/0:14,0:12:29.86:0,30,307	0/0:8,0:8:17.57:0,18,268	0/0:8,0:8:5.91:0,6,105	0/0:15,0:12:21.02:0,21,261	0/0:7,0:3:9.03:0,9,128	0/1:18,0:17:37:37,0,346	0/1:19,0:17:7.01:7,0,472	0/0:9,0:9:20.65:0,21,269	0/0:13,0:6:6.79:0,7,102
chr10	96428251	.	TAC	T	826.64	PASS	AB=0.910;AC=14;AF=0.280;AN=50;BaseQRankSum=3.988;DP=828;FS=0.000;HRun=0;HaplotypeScore=103.2030;InbreedingCoeff=-0.0154;MQ=57.64;MQ0=18;MQRankSum=1.704;QD=2.10;ReadPosRankSum=0.965;VQSLOD=1.9729;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,12:40:20.89:210,21,0	0/0:14,0:14:16.83:0,17,203	./.	./.	0/0:16,0:14:12.02:0,12,152	0/1:24,5:29:14.10:14,0,180	0/1:31,5:36:99:112,0,224	0/0:26,0:24:9.42:0,9,79	0/1:33,0:32:85.04:85,0,257	0/1:28,0:28:7.61:8,0,204	0/0:13,0:13:6.02:0,6,88	0/1:26,8:34:38.25:38,0,202	0/1:31,1:33:45.09:45,0,224	0/1:28,2:30:11.08:11,0,225	0/0:34,0:33:17.63:0,18,387	1/1:27,15:43:35.76:354,36,0	0/0:18,0:34:47.64:0,48,493	0/0:29,0:35:42.02:0,42,509	0/0:13,0:14:8.98:0,9,90	0/0:12,0:22:17.99:0,18,155	0/0:67,1:69:48.95:0,49,885	0/1:19,2:21:8.72:9,0,250	0/1:16,2:18:23.25:23,0,167	0/1:38,7:44:73.57:74,0,511	0/0:16,0:16:24.08:0,24,348	0/0:25,0:25:18.02:0,18,240	0/0:14,0:20:5.21:0,5,204	./.
chr10	96432945	.	TA	T	3671.92	PASS	AB=0.618;AC=48;AF=0.857;AN=56;BaseQRankSum=-0.221;DP=430;FS=11.575;HRun=15;HaplotypeScore=50.8185;InbreedingCoeff=0.1377;MQ=69.05;MQ0=7;MQRankSum=-1.694;QD=9.77;ReadPosRankSum=2.049;VQSLOD=2.1854;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,2:25:11.89:87,12,0	1/1:1,2:4:10.85:61,11,0	0/0:26,0:8:2.83:0,3,27	0/0:26,1:12:0.93:0,1,52	1/1:4,17:23:17.68:220,18,0	1/1:8,12:20:33.89:240,34,0	1/1:5,6:10:5.72:38,6,0	1/1:5,17:23:41.89:257,42,0	1/1:5,6:11:23.63:153,24,0	1/1:2,9:11:29.37:183,29,0	1/1:7,7:15:2.29:133,2,0	1/1:4,8:12:26.58:173,27,0	1/1:2,3:6:10.89:63,11,0	1/1:3,4:7:5.89:38,6,0	0/1:5,5:11:29.92:79,0,30	1/1:3,0:10:12.20:35,12,0	0/1:12,12:25:1.16:226,0,1	1/1:3,10:13:23.53:154,24,0	1/1:5,17:22:27.73:292,28,0	1/1:5,10:17:13.21:196,13,0	0/1:4,8:12:19.22:131,0,19	1/1:2,2:4:5.81:38,6,0	1/1:5,11:16:35.41:230,35,0	1/1:2,3:4:5.87:38,6,0	0/1:4,13:17:18.44:108,0,18	1/1:6,8:13:0.20:126,0,0	1/1:6,7:14:12.21:115,12,0	1/1:6,17:22:40.39:256,40,0
chr10	96433539	.	CT	C	105.66	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.342;DP=677;FS=11.112;HRun=4;HaplotypeScore=104.6667;InbreedingCoeff=0.8094;MQ=77.71;MQ0=8;MQRankSum=1.235;QD=4.06;ReadPosRankSum=1.596;VQSLOD=-0.3443;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:62.12:0,62,348	0/0:7,0:7:16.61:0,17,152	0/0:38,0:23:52.87:0,53,439	0/0:35,0:18:18.58:0,19,183	0/0:31,0:31:76.29:0,76,706	0/0:32,0:32:63.18:0,63,677	0/0:15,0:15:29.80:0,30,275	0/0:28,0:28:71.41:0,71,706	0/0:19,0:19:32.98:0,33,334	0/0:34,0:34:81.37:0,81,806	0/0:27,0:27:66.31:0,66,659	0/0:21,0:21:51.01:0,51,501	0/0:30,0:30:66.03:0,66,648	0/0:22,0:22:32.99:0,33,307	0/0:24,0:24:64.45:0,64,640	0/0:29,0:29:73.68:0,74,339	1/1:17,2:19:7.89:173,8,0	1/1:4,3:7:1.07:30,1,0	0/0:21,0:21:48:0,48,475	0/0:30,0:30:82.13:0,82,754	0/0:17,0:17:43.87:0,44,439	0/0:22,0:22:51.29:0,51,499	0/0:25,0:25:53.12:0,53,518	0/0:17,0:17:33.03:0,33,362	0/0:15,0:15:26.39:0,26,252	0/0:27,0:27:58.89:0,59,654	0/0:32,0:32:60.55:0,61,647	0/0:21,0:20:30.42:0,30,254
chr10	96433543	.	T	TA	1613.08	PASS	AB=0.749;AC=22;AF=0.393;AN=56;BaseQRankSum=-6.311;DP=713;FS=0.865;HRun=17;HaplotypeScore=101.4871;InbreedingCoeff=-0.3456;MQ=74.39;MQ0=8;MQRankSum=2.116;QD=3.37;ReadPosRankSum=-2.922;VQSLOD=-0.3266;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:28:25.72:0,26,73	0/0:5,0:7:9.65:0,10,42	0/0:43,0:22:9.36:0,9,63	0/0:36,0:18:2.14:0,2,28	0/0:23,1:34:30:0,30,209	0/1:15,15:32:56.53:113,0,57	0/1:8,5:15:9:46,0,9	0/1:16,14:31:21.10:134,0,21	0/1:8,10:18:28.69:50,0,29	0/1:20,19:40:29.60:226,0,30	0/1:19,9:29:67.50:112,0,68	0/1:18,3:22:15.33:155,0,15	0/1:18,13:32:7.37:122,0,7	0/1:12,13:25:22.99:23,0,54	0/0:21,0:27:48.08:0,48,232	0/0:2,0:28:48.65:0,49,135	0/1:21,0:21:34.73:37,0,35	0/1:8,0:8:9.13:25,0,9	1/1:12,2:20:12.96:163,13,0	1/1:14,18:32:10.62:230,11,0	0/1:11,5:18:34.38:34,0,57	0/1:11,10:22:42.06:42,0,54	0/1:19,8:29:45.68:46,0,72	0/1:8,7:15:41.98:42,0,64	0/1:17,0:21:9.69:10,0,98	0/0:24,0:28:53.01:0,53,265	0/1:13,16:30:57.41:128,0,57	0/1:9,7:18:20.25:43,0,20
chr10	96434068	.	AG	A	16415.82	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=12.171;DP=653;FS=0.331;HRun=1;HaplotypeScore=117.3311;InbreedingCoeff=0.9996;MQ=63.58;MQ0=2;MQRankSum=-2.516;QD=35.23;ReadPosRankSum=1.339;VQSLOD=4.5621;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:48.16:658,48,0	0/0:15,0:15:45.15:0,45,639	0/0:28,0:21:57.14:0,57,724	0/0:19,0:17:44.80:0,45,544	0/0:27,0:27:81.21:0,81,1077	1/1:0,16:16:42.14:570,42,0	1/1:0,19:19:45.11:603,45,0	1/1:0,33:33:96.18:1184,96,0	1/1:0,17:17:45.15:628,45,0	1/1:1,37:37:99:1371,105,0	1/1:0,19:19:57.10:734,57,0	1/1:0,25:25:60.16:837,60,0	1/1:3,24:26:72.22:956,72,0	1/1:0,17:17:29.89:402,30,0	0/0:32,0:32:93.25:0,93,1252	1/1:0,16:16:36.12:497,36,0	1/1:0,34:34:84.19:1143,84,0	1/1:0,15:15:42.14:576,42,0	1/1:1,18:19:31.24:683,31,0	1/1:0,26:26:75.22:1013,75,0	1/1:0,16:16:39.13:544,39,0	1/1:1,21:22:59.80:857,60,0	1/1:0,15:15:36.12:498,36,0	1/1:0,26:26:66.22:906,66,0	0/0:33,0:33:96.31:0,96,1335	0/0:33,0:33:99:0,99,1340	1/1:0,38:38:99:1398,102,0	1/1:1,8:9:27.07:357,27,0
chr10	96435398	.	CA	C	569.30	PASS	AB=0.825;AC=12;AF=0.222;AN=54;BaseQRankSum=-4.018;DP=315;FS=0.691;HRun=14;HaplotypeScore=43.2014;InbreedingCoeff=0.4379;MQ=56.98;MQ0=10;MQRankSum=4.865;QD=6.26;ReadPosRankSum=1.664;VQSLOD=1.7209;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:12:19.13:0,19,104	1/1:1,2:3:5.94:41,6,0	0/0:18,0:7:13.87:0,14,101	0/1:10,0:3:4.18:4,0,18	1/1:5,8:12:17.85:123,18,0	0/0:11,0:8:9.86:0,10,65	0/0:5,0:4:3.87:0,4,23	0/0:21,0:13:5.95:0,6,37	0/0:7,0:6:7.62:0,8,41	0/0:13,0:12:22.23:0,22,124	0/0:6,0:6:1.70:0,2,17	1/1:5,0:2:1.82:7,2,0	0/0:4,0:2:0:0,0,0	0/0:9,0:8:6.80:0,7,40	0/1:6,10:18:3.71:186,0,4	0/0:4,0:3:8.92:0,9,63	0/0:29,1:31:17.23:0,17,496	0/0:21,2:23:15.47:0,15,286	0/0:20,0:15:19.83:0,20,117	0/0:4,0:3:5.91:0,6,38	0/0:5,0:2:2.96:0,3,19	./.	0/0:3,0:3:2.94:0,3,18	0/1:8,0:7:0.02:0,0,0	1/1:3,13:17:34.75:232,35,0	0/1:9,7:16:11.09:117,0,11	0/0:11,0:8:12.28:0,12,78	0/0:13,0:13:24.79:0,25,151
chr10	96436112	.	G	GC	5435.64	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-10.101;DP=653;FS=7.238;HRun=3;HaplotypeScore=81.9749;InbreedingCoeff=0.9948;MQ=71.26;MQ0=0;MQRankSum=-1.029;QD=36.24;ReadPosRankSum=2.088;VQSLOD=5.3196;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:93.28:0,93,1115	1/1:0,9:9:21.07:294,21,0	0/0:10,0:10:29.64:0,30,265	0/0:17,0:17:23.72:0,24,476	1/1:1,22:23:60.20:839,60,0	0/0:21,0:21:63.19:0,63,756	0/0:33,0:33:93.28:0,93,1116	0/0:32,0:32:87.27:0,87,1044	0/0:21,0:21:63.18:0,63,744	0/0:24,0:24:65.94:0,66,767	0/0:13,0:13:27.08:0,27,324	0/0:31,0:31:81.23:0,81,960	0/0:29,0:29:84.24:0,84,996	0/0:32,0:32:93.29:0,93,1114	1/1:2,22:24:63.21:882,63,0	0/0:23,0:23:60.18:0,60,720	1/1:5,23:28:72.19:968,72,0	1/1:3,20:23:63.17:859,63,0	0/0:15,0:15:42.13:0,42,504	0/0:14,0:14:36.11:0,36,431	0/0:60,0:60:99:0,144,1711	0/0:4,0:5:14.26:0,14,151	0/0:10,0:10:30.09:0,30,360	0/0:31,0:31:87.27:0,87,1044	1/1:2,19:21:54.18:755,54,0	1/1:2,20:22:60.20:838,60,0	0/0:32,0:32:81.25:0,81,972	0/0:12,0:12:27.08:0,27,324
chr10	96436157	.	AATT	A	8396.74	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=2.849;DP=606;FS=20.324;HRun=0;HaplotypeScore=109.3664;InbreedingCoeff=0.9955;MQ=79.29;MQ0=0;MQRankSum=-6.390;QD=40.76;ReadPosRankSum=2.132;VQSLOD=4.6834;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.31:0,96,2149	0/0:6,0:6:18.06:0,18,415	0/0:21,0:21:51.18:0,51,1123	0/0:19,0:19:51.13:0,51,1030	0/0:20,0:20:60.21:0,60,1374	0/0:20,0:20:57.20:0,57,1314	0/0:25,0:25:75.26:0,75,1729	1/1:1,31:32:93.32:1574,93,0	0/0:18,0:18:51.18:0,51,1176	0/0:26,0:26:72.25:0,72,1652	0/0:9,0:9:24.08:0,24,554	0/0:25,0:25:66.23:0,66,1522	0/0:23,0:23:66.21:0,66,1446	0/0:29,0:29:87.28:0,87,1931	0/0:23,0:23:63.22:0,63,1444	0/0:17,0:17:51.18:0,51,1176	1/1:1,26:27:57.19:944,57,0	1/1:4,16:20:48.16:807,48,0	1/1:1,16:17:45.14:734,45,0	1/1:0,13:13:33.11:549,33,0	1/1:3,61:64:99:2457,145,0	0/0:10,0:10:30.10:0,30,692	0/0:13,0:13:39.13:0,39,899	0/0:22,0:22:66.23:0,66,1520	0/0:15,0:15:39.13:0,39,897	0/0:27,0:27:81.27:0,81,1817	1/1:2,26:28:63.22:1075,63,0	1/1:0,5:5:15.05:256,15,0
chr10	96436352	.	AT	A	1315.42	PASS	AB=0.813;AC=15;AF=0.268;AN=56;BaseQRankSum=0.257;DP=393;FS=3.124;HRun=15;HaplotypeScore=63.6932;InbreedingCoeff=0.5746;MQ=55.16;MQ0=21;MQRankSum=0.294;QD=9.40;ReadPosRankSum=-0.086;VQSLOD=2.9975;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:22:36.68:0,37,169	0/1:6,1:7:1.53:2,0,100	0/0:35,0:8:2.04:0,2,6	0/0:30,0:6:2.90:0,3,16	0/1:16,5:20:44.18:44,0,136	0/0:15,0:15:28.52:0,29,144	0/0:5,0:5:11.64:0,12,68	1/1:3,17:20:50.14:326,50,0	0/0:6,0:5:11.23:0,11,52	0/0:15,0:15:26.98:0,27,126	0/0:12,1:13:9.22:0,9,105	0/0:6,0:6:14.15:0,14,71	0/0:4,0:3:2.96:0,3,19	0/0:8,0:8:11.52:0,12,66	0/1:4,2:6:4.27:4,0,90	0/0:6,0:6:5.36:0,5,22	0/0:16,0:16:30.71:0,31,137	0/0:24,0:22:38.40:0,38,171	1/1:12,15:27:40.70:268,41,0	1/1:4,12:17:40.28:255,40,0	1/1:2,2:4:5.83:38,6,0	0/0:2,0:2:2.97:0,3,20	0/0:8,0:8:11.09:0,11,52	0/0:4,0:4:5.23:0,5,35	0/0:13,1:13:4.71:0,5,161	0/0:14,1:15:13.59:0,14,225	1/1:6,10:15:32.29:209,32,0	1/1:3,18:21:53.05:345,53,0
chr10	96436354	.	T	TA	353.59	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.224;DP=402;FS=0.904;HRun=0;HaplotypeScore=69.9357;InbreedingCoeff=0.7449;MQ=54.29;MQ0=25;MQRankSum=-1.383;QD=11.05;ReadPosRankSum=1.572;VQSLOD=4.0281;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,17:22:14.73:372,15,0	0/0:8,0:8:21.05:0,21,250	0/0:35,0:8:4.32:0,4,87	0/0:31,0:6:7.71:0,8,44	0/0:21,0:19:45.92:0,46,462	0/0:16,0:16:41.96:0,42,476	0/0:6,0:5:15:0,15,176	0/0:22,0:22:59.97:0,60,517	0/0:6,0:5:14.98:0,15,178	0/0:17,0:15:44.62:0,45,453	0/0:14,0:14:35.77:0,36,421	0/0:6,0:6:17.93:0,18,187	0/0:5,0:4:8.64:0,9,71	0/0:8,0:8:23.82:0,24,228	0/0:6,0:6:15.04:0,15,191	1/1:1,5:6:8.96:91,9,0	0/0:14,0:15:30.12:0,30,180	0/0:23,0:21:43.70:0,44,262	0/0:28,0:28:78.80:0,79,667	0/0:18,0:18:50.90:0,51,423	0/0:4,0:4:11.97:0,12,98	0/0:2,0:2:5.95:0,6,56	0/0:8,0:8:23.45:0,23,202	0/0:4,0:4:12.03:0,12,149	0/0:15,0:14:39.05:0,39,421	0/0:15,0:15:45.08:0,45,517	0/0:16,0:15:44.98:0,45,390	0/0:21,0:20:59.98:0,60,521
chr10	96436355	.	T	TTA	1775.08	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=1.121;DP=399;FS=2.059;HRun=0;HaplotypeScore=71.4541;InbreedingCoeff=0.8875;MQ=53.68;MQ0=28;MQRankSum=2.217;QD=11.99;ReadPosRankSum=3.035;VQSLOD=3.1610;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:20:37.95:0,38,301	0/0:8,0:8:21.04:0,21,273	0/0:35,0:8:14.75:0,15,96	0/0:31,0:6:5.89:0,6,38	0/0:22,0:20:47.99:0,48,520	0/0:14,0:15:38.19:0,38,384	0/0:6,0:5:14.91:0,15,162	1/1:21,0:21:17.72:113,18,0	0/0:6,0:5:14.71:0,15,148	0/0:15,0:13:37.27:0,37,325	0/0:14,0:14:37.24:0,37,363	0/0:6,0:6:17.46:0,17,162	0/0:5,0:4:9.92:0,10,66	0/0:8,0:8:22.82:0,23,191	0/0:6,0:6:15.05:0,15,214	0/0:5,0:5:0.55:0,1,49	1/1:3,13:16:28.67:488,29,0	1/1:5,18:21:41.94:593,42,0	1/1:27,0:27:50.74:331,51,0	1/1:19,0:18:28.88:133,29,0	1/1:4,0:4:9.31:51,9,0	0/0:2,0:2:5.69:0,6,50	0/0:7,0:8:18.91:0,19,144	0/0:4,0:4:12.04:0,12,138	0/0:16,0:15:36.06:0,36,420	0/0:15,0:14:41.46:0,41,513	1/1:16,0:15:25.95:134,26,0	1/1:22,0:20:33.53:133,34,0
chr10	96437359	.	T	TCC	3008.58	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-11.189;DP=752;FS=1.673;HRun=4;HaplotypeScore=88.7254;InbreedingCoeff=0.9998;MQ=86.72;MQ0=0;MQRankSum=-4.361;QD=42.37;ReadPosRankSum=3.002;VQSLOD=2.8431;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,39:45:99:1943,108,0	0/0:12,0:12:36.12:0,36,480	0/0:28,0:28:78.24:0,78,1013	0/0:24,0:23:61.39:0,61,731	0/0:24,0:24:69.16:0,69,855	0/0:13,0:13:36.12:0,36,480	0/0:24,0:24:66.16:0,66,845	0/0:37,0:37:99:0,108,1427	0/0:30,0:30:84.27:0,84,1120	0/0:41,0:41:99:0,108,1427	0/0:23,0:23:66.21:0,66,880	0/0:31,0:31:84.25:0,84,1089	0/0:35,0:35:99:0,99,1320	0/0:34,0:34:93.29:0,93,1225	0/0:33,0:33:93.30:0,93,1240	1/1:1,24:26:66.23:1188,66,0	0/0:30,0:30:84.25:0,84,1103	0/0:18,0:18:51.13:0,51,661	0/0:17,0:17:45.14:0,45,586	0/0:24,0:24:72.24:0,72,960	0/0:31,0:31:81.25:0,81,1065	0/0:18,0:18:51.13:0,51,661	0/0:27,0:27:69.18:0,69,899	0/0:30,0:30:90.30:0,90,1199	0/0:25,0:25:72.21:0,72,940	0/0:29,0:29:84.27:0,84,1120	0/0:28,0:27:75.21:0,75,954	0/0:15,0:15:45.15:0,45,599
chr10	96438551	.	T	TACAC	8912.80	PASS	AB=0.662;AC=47;AF=0.904;AN=52;BaseQRankSum=-3.036;DP=689;FS=0.000;HRun=0;HaplotypeScore=147.7776;InbreedingCoeff=0.1479;MQ=68.85;MQ0=4;MQRankSum=-0.363;QD=14.68;ReadPosRankSum=2.392;VQSLOD=4.5244;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:46,0:45:18.02:259,18,0	1/1:12,0:17:3.01:52,3,0	./.	0/0:31,0:26:3.01:0,3,35	1/1:14,0:14:15.03:211,15,0	1/1:23,13:37:27.08:587,27,0	0/1:16,13:30:23.26:476,0,23	1/1:31,0:31:29.88:364,30,0	1/1:8,14:22:18.06:428,18,0	1/1:25,11:38:50.83:892,51,0	1/1:11,4:17:15.05:322,15,0	0/1:6,8:16:26.53:339,0,27	1/1:11,7:19:15.05:328,15,0	1/1:8,9:20:17.80:369,18,0	./.	1/1:14,0:22:8.72:111,9,0	1/1:14,0:14:8.93:68,9,0	0/1:12,1:22:6.49:15,0,6	1/1:10,4:14:17.72:307,18,0	1/1:10,7:20:11.78:226,12,0	1/1:13,20:33:27.09:642,27,0	1/1:12,12:24:13.12:307,13,0	1/1:15,9:26:20.54:381,21,0	1/1:21,20:43:41.88:940,42,0	1/1:19,0:19:6.46:49,6,0	1/1:28,0:27:50.32:427,50,0	1/1:8,10:22:35.44:694,35,0	1/1:7,0:7:6.02:119,6,0
chr10	96439102	.	G	GA	1472.13	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.433;DP=798;FS=0.628;HRun=1;HaplotypeScore=75.3374;InbreedingCoeff=0.9989;MQ=80.76;MQ0=0;MQRankSum=-0.947;QD=34.24;ReadPosRankSum=2.020;VQSLOD=3.6748;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,1747	0/0:15,0:15:45.15:0,45,582	0/0:25,0:25:71.23:0,71,873	0/0:15,0:15:39.13:0,39,505	0/0:24,0:24:72.23:0,72,932	0/0:24,0:24:66.20:0,66,840	0/0:25,0:25:72.23:0,72,930	0/0:32,0:32:93.29:0,93,1183	0/0:28,0:28:78.25:0,78,1012	0/0:37,0:36:99:0,105,1339	0/0:22,0:22:66.21:0,66,855	0/0:41,0:41:99:0,123,1596	0/0:36,0:36:99:0,105,1357	0/0:22,0:22:60.19:0,60,779	0/0:34,0:34:96.28:0,96,1227	0/0:46,0:46:99:0,132,1666	1/1:0,22:22:54.14:784,54,0	1/1:1,20:21:54.18:809,54,0	0/0:16,0:16:42.14:0,42,544	0/0:30,0:30:78.24:0,78,997	0/0:37,0:37:99:0,111,1439	0/0:31,0:31:93.30:0,93,1205	0/0:26,0:26:78.25:0,78,1012	0/0:31,0:31:90.29:0,90,1165	0/0:30,0:30:90.24:0,90,1134	0/0:32,0:32:96.30:0,96,1230	0/0:40,0:40:99:0,111,1408	0/0:9,0:9:24.08:0,24,311
chr10	96439958	.	A	AG	221.66	PASS	AB=0.871;AC=5;AF=0.093;AN=54;BaseQRankSum=1.897;DP=320;FS=10.770;HRun=0;HaplotypeScore=80.5119;InbreedingCoeff=-0.1063;MQ=50.53;MQ0=2;MQRankSum=-4.307;QD=4.35;ReadPosRankSum=-2.685;VQSLOD=1.3519;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:28.33:0,28,370	0/0:4,0:4:12.01:0,12,148	0/0:15,0:7:17.72:0,18,195	./.	0/0:17,0:17:51.14:0,51,677	0/1:9,6:14:75.66:141,0,76	0/1:4,5:9:42.59:120,0,43	0/0:21,0:17:4.84:0,5,299	0/0:2,0:2:2.68:0,3,11	0/1:15,0:15:40.28:40,0,102	0/0:8,0:9:4.82:0,5,58	0/0:8,0:8:20.34:0,20,164	0/0:8,0:8:16.92:0,17,89	0/0:10,0:10:25.82:0,26,143	0/0:10,0:10:30.09:0,30,402	0/0:5,0:5:12.03:0,12,154	0/0:17,0:17:29.23:0,29,329	0/0:13,0:13:23.21:0,23,205	0/0:9,0:8:23.35:0,23,165	0/0:14,0:14:36.83:0,37,209	0/1:4,0:4:6.75:7,0,14	0/0:5,0:5:14.55:0,15,91	0/0:7,0:8:8.89:0,9,43	0/0:11,0:11:2.84:0,3,97	0/0:16,0:16:48.15:0,48,642	0/0:20,0:20:60.19:0,60,810	0/0:19,0:19:39.91:0,40,284	0/1:8,0:8:25.35:25,0,79
chr10	96439959	.	A	AAAGG	6447.36	PASS	AB=0.830;AC=34;AF=0.607;AN=56;BaseQRankSum=3.150;DP=340;FS=21.337;HRun=0;HaplotypeScore=90.3955;InbreedingCoeff=0.3306;MQ=48.33;MQ0=2;MQRankSum=-7.931;QD=25.48;ReadPosRankSum=1.440;VQSLOD=2.8722;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:17.82:22,0,18	0/0:3,0:3:9.03:0,9,156	0/0:15,0:7:12.04:0,12,173	0/1:8,0:2:0:0,0,0	0/0:18,0:18:48.16:0,48,810	1/1:9,7:15:32.78:627,33,0	1/1:6,3:9:3.71:280,4,0	1/1:23,0:19:32.48:702,32,0	1/1:0,1:2:3.01:75,3,0	1/1:5,7:16:31.71:590,32,0	1/1:3,2:9:9.03:223,9,0	0/1:8,1:9:74.20:247,0,74	1/1:4,4:8:18.06:387,18,0	0/1:7,4:11:80.48:355,0,80	0/0:10,0:10:24.08:0,24,400	0/0:5,0:5:9.49:0,9,32	1/1:10,1:24:23.98:309,24,0	1/1:7,1:16:12.04:212,12,0	0/1:8,3:10:21.72:421,0,22	0/1:12,2:14:49.42:495,0,49	0/1:2,2:4:30.30:47,0,30	1/1:5,0:5:2.30:116,2,0	1/1:8,1:9:12.04:274,12,0	1/1:6,6:12:7.67:383,8,0	0/0:16,0:16:42.14:0,42,715	0/0:20,0:20:57.19:0,57,956	0/1:10,9:19:35.20:569,0,35	1/1:5,3:9:8.91:113,9,0
chr10	96439967	.	GAAAAAAGA	G	825.61	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=-1.537;DP=349;FS=6.578;HRun=0;HaplotypeScore=118.4495;InbreedingCoeff=0.3917;MQ=46.07;MQ0=4;MQRankSum=-1.127;QD=10.07;ReadPosRankSum=-0.524;VQSLOD=1.9798;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:23.95:497,24,0	0/0:4,0:4:12.04:0,12,535	0/0:15,0:7:17.35:0,17,205	0/0:7,0:1:0.47:0,0,1	0/0:19,0:19:54.17:0,54,2073	0/0:17,0:16:21.05:0,21,916	0/1:9,0:9:4.61:5,0,338	0/1:29,0:25:93.58:94,0,558	0/0:3,0:3:5.93:0,6,124	0/0:17,0:17:23.01:0,23,779	0/0:8,0:8:15.05:0,15,349	0/1:11,0:11:15.99:16,0,424	0/0:8,0:8:18.06:0,18,529	0/0:12,0:12:33.09:0,33,783	0/0:9,0:9:27.02:0,27,651	1/1:0,5:6:12.04:335,12,0	0/0:23,0:23:15.06:0,15,901	0/0:11,0:11:18.06:0,18,599	0/0:13,0:10:29.05:0,29,570	0/0:14,0:14:42.14:0,42,983	0/0:5,0:5:9.42:0,9,94	0/0:6,0:6:18.05:0,18,376	0/0:10,0:10:15.03:0,15,386	0/1:12,0:12:18.79:19,0,206	0/0:17,0:17:45.15:0,45,1945	0/0:21,0:21:60.18:0,60,2019	0/0:18,0:18:35.74:0,36,1024	0/0:10,0:10:15.04:0,15,303
chr10	96439970	.	A	AAAAAAGAAAGAAAG	11401.95	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=5.304;DP=347;FS=26.524;HRun=0;HaplotypeScore=137.0960;InbreedingCoeff=0.7558;MQ=45.89;MQ0=4;MQRankSum=-7.246;QD=49.57;ReadPosRankSum=-0.260;VQSLOD=2.3823;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:11.51:12,0,349	0/0:4,0:4:12.04:0,12,387	0/0:16,0:6:11.09:0,11,150	0/0:8,0:2:0.47:0,0,1	0/0:18,0:18:51.17:0,51,1672	1/1:16,0:16:41.97:548,42,0	1/1:10,0:10:21.43:294,21,0	1/1:29,0:26:61.54:842,62,0	1/1:3,0:4:6.02:93,6,0	1/1:17,0:17:35.16:670,35,0	1/1:8,0:8:15.05:216,15,0	1/1:8,1:10:27.01:588,27,0	1/1:7,2:9:21.05:820,21,0	1/1:11,2:13:36.11:1106,36,0	0/0:9,0:9:24.06:0,24,490	0/0:6,0:6:7.37:0,7,274	0/0:20,0:20:17.97:0,18,352	0/1:10,0:10:93.84:111,0,94	1/1:13,1:11:26.99:738,27,0	1/1:10,4:14:42.14:1610,42,0	1/1:5,0:5:6.89:113,7,0	1/1:5,1:6:18.06:759,18,0	1/1:2,2:10:15.04:524,15,0	1/1:12,1:13:16.52:841,17,0	0/0:15,0:15:45.15:0,45,1570	0/0:21,0:21:57.18:0,57,1669	1/1:12,4:17:36.12:1260,36,0	1/1:8,0:8:15.05:256,15,0
chr10	96444204	.	TAA	T	8491.15	PASS	AB=0.605;AC=36;AF=0.643;AN=56;BaseQRankSum=-13.580;DP=639;FS=1.125;HRun=12;HaplotypeScore=93.2116;InbreedingCoeff=0.8366;MQ=74.34;MQ0=1;MQRankSum=-0.500;QD=19.39;ReadPosRankSum=2.184;VQSLOD=4.4023;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,1:22:0.70:1,0,124	0/1:6,1:16:28.50:29,0,38	0/0:21,0:18:19.67:0,20,373	0/0:17,0:16:29.88:0,30,304	0/0:5,0:23:41.19:0,41,228	1/1:3,32:35:77.68:845,78,0	1/1:2,14:16:36.08:366,36,0	1/1:7,19:27:51.46:541,51,0	1/1:3,16:20:32.80:317,33,0	1/1:7,32:40:69.62:897,70,0	1/1:7,16:23:45.86:446,46,0	1/1:5,19:26:53.58:512,54,0	1/1:3,30:33:75.16:763,75,0	1/1:1,16:17:48.11:488,48,0	0/0:4,1:20:1.89:0,2,75	0/0:3,0:30:62.77:0,63,255	0/0:3,0:16:22.46:0,22,79	0/0:1,0:19:34.93:0,35,123	1/1:7,9:17:8.42:243,8,0	1/1:6,27:33:46.54:674,47,0	1/1:4,13:17:24.49:324,24,0	1/1:2,19:22:49.22:495,49,0	1/1:2,15:17:42.06:427,42,0	1/1:1,12:14:32.81:317,33,0	0/0:2,0:23:34.93:0,35,123	0/0:6,1:32:39.33:0,39,261	1/1:8,27:35:65.86:653,66,0	1/1:0,7:7:15.03:153,15,0
chr10	96445048	.	C	CA	14647.07	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.299;DP=569;FS=5.342;HRun=8;HaplotypeScore=51.6427;InbreedingCoeff=0.9827;MQ=72.03;MQ0=1;MQRankSum=-7.409;QD=27.69;ReadPosRankSum=5.132;VQSLOD=5.0614;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,24:33:71.67:788,72,0	1/1:3,11:14:24.07:277,24,0	0/0:24,0:19:44.31:0,44,378	0/0:16,0:12:18.68:0,19,167	1/1:5,26:31:81.09:888,81,0	1/1:0,19:19:51.15:589,51,0	1/1:0,15:15:39.12:450,39,0	1/1:4,26:30:78.20:879,78,0	1/1:3,19:22:48.14:554,48,0	1/1:3,24:27:69.16:767,69,0	1/1:5,17:22:54.09:595,54,0	1/1:1,13:14:27.08:312,27,0	1/1:2,16:18:14.67:423,15,0	1/1:1,14:15:39.05:433,39,0	1/1:1,13:14:39.12:450,39,0	1/1:3,22:25:48.14:554,48,0	1/1:1,30:31:81.24:935,81,0	1/1:3,18:21:48.14:554,48,0	1/1:2,18:21:57.09:640,57,0	1/1:2,24:26:72.15:814,72,0	1/1:2,7:9:21.06:242,21,0	1/1:2,12:14:39.11:447,39,0	1/1:1,8:9:24.07:277,24,0	1/1:1,18:19:48.14:554,48,0	1/1:0,12:12:33.10:381,33,0	1/1:3,21:24:63.19:727,63,0	1/1:3,20:23:51.15:589,51,0	1/1:5,15:20:47.73:529,48,0
chr10	96445229	.	CA	C	3474.68	PASS	AB=0.642;AC=45;AF=0.804;AN=56;BaseQRankSum=0.336;DP=609;FS=14.466;HRun=13;HaplotypeScore=75.1005;InbreedingCoeff=0.1477;MQ=59.38;MQ0=34;MQRankSum=1.988;QD=7.41;ReadPosRankSum=5.048;VQSLOD=0.8721;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,15:23:26.80:197,27,0	1/1:3,0:10:14.43:43,14,0	0/0:69,0:15:18.72:0,19,120	0/0:70,1:13:9.72:0,10,77	1/1:5,0:29:33.09:99,33,0	1/1:8,18:29:50.53:345,51,0	1/1:3,2:5:10.68:66,11,0	1/1:11,19:29:13.09:343,13,0	1/1:6,8:14:8.91:83,9,0	1/1:5,14:17:3.40:178,3,0	0/1:8,13:16:31.48:161,0,31	1/1:5,10:15:5.50:172,5,0	0/1:4,3:6:20.25:35,0,20	1/1:11,8:18:11.79:114,12,0	1/1:2,0:16:18.51:55,19,0	0/1:6,6:12:8.32:110,0,8	1/1:2,0:20:16.29:48,16,0	1/1:4,1:21:19.64:89,20,0	0/1:13,15:28:0.08:281,0,0	0/1:7,14:20:44.37:179,0,44	1/1:2,3:6:10.93:72,11,0	1/1:3,10:13:1.43:150,1,0	0/1:7,11:18:2.07:126,0,2	1/1:5,3:8:10.19:56,10,0	1/1:4,0:17:24.44:72,24,0	1/1:3,1:22:34.15:119,34,0	0/1:11,12:23:17.99:168,0,18	1/1:3,9:11:4.16:115,4,0
chr10	96446961	.	A	AATAAAT	596.52	PASS	AB=0.809;AC=6;AF=0.107;AN=56;BaseQRankSum=5.895;DP=273;FS=18.378;HRun=0;HaplotypeScore=55.1504;InbreedingCoeff=-0.1608;MQ=55.63;MQ0=1;MQRankSum=-1.970;QD=7.75;ReadPosRankSum=-1.636;VQSLOD=-0.0560;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:60.16:0,60,1288	0/0:2,0:2:6.02:0,6,119	0/0:4,0:1:3.01:0,3,48	0/0:5,0:3:9.03:0,9,185	0/0:12,0:12:36.11:0,36,722	0/0:12,0:11:33.07:0,33,612	0/0:3,0:3:9.01:0,9,98	0/1:33,0:32:99:247,0,824	0/0:8,0:8:18.04:0,18,290	0/0:18,0:18:51.17:0,51,1125	0/0:5,0:5:15.04:0,15,266	0/0:3,0:3:9.01:0,9,96	0/0:4,0:4:12.04:0,12,235	0/0:5,0:5:15:0,15,211	0/0:10,0:10:18.06:0,18,338	0/0:4,0:4:6.02:0,6,148	0/0:20,0:19:54.15:0,54,1141	0/0:16,0:16:9.93:0,10,934	0/1:14,0:14:44.96:45,0,339	0/1:2,1:7:75.44:144,0,75	0/1:2,0:3:56.18:61,0,56	0/0:1,0:1:3.01:0,3,74	0/0:10,0:10:30.09:0,30,663	0/0:4,0:3:9.03:0,9,219	0/0:11,0:11:30.09:0,30,589	0/0:18,0:18:51.17:0,51,1133	0/1:8,0:10:46.32:46,0,291	0/1:6,0:9:99:176,0,199
chr10	96448710	.	T	TAG	33.28	PASS	AB=0.981;AC=14;AF=0.250;AN=56;BaseQRankSum=7.246;DP=662;FS=9.235;HRun=0;HaplotypeScore=230.6138;InbreedingCoeff=0.2767;MQ=38.08;MQ0=2;MQRankSum=-5.476;QD=0.15;ReadPosRankSum=-3.827;VQSLOD=0.8321;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:5.04:0,5,51	0/0:5,0:4:3.01:0,3,43	0/0:19,0:16:39.08:0,39,535	0/0:16,0:13:32.78:0,33,448	0/0:16,1:17:2.98:0,3,46	0/0:16,0:16:0.47:0,0,2	0/0:23,0:23:2.99:0,3,36	0/0:29,0:28:70.43:0,70,991	1/1:33,0:33:0.84:2,1,0	0/1:52,1:52:99:101,0,933	0/1:18,0:18:0:0,0,0	0/0:35,1:36:1.28:0,1,12	1/1:35,1:36:0.85:2,1,0	1/1:30,1:31:2.56:7,3,0	0/0:44,2:46:6.24:0,6,111	0/0:55,2:57:11.46:0,11,222	0/1:15,1:16:3.15:3,0,40	0/1:7,0:7:11.05:11,0,81	0/0:14,0:14:11.73:0,12,347	0/0:22,0:22:20.99:0,21,315	0/0:24,0:24:20.58:0,21,278	1/1:15,0:16:0.89:2,1,0	1/1:17,0:17:0.83:2,1,0	0/0:13,1:14:0.46:0,0,2	0/0:22,0:22:10.60:0,11,217	0/0:27,1:28:21.41:0,21,722	0/0:19,0:19:15.82:0,16,261	0/0:10,0:10:12.01:0,12,154
chr10	96448716	.	G	GACGC	773.38	PASS	AB=0.952;AC=12;AF=0.214;AN=56;BaseQRankSum=6.664;DP=746;FS=49.218;HRun=0;HaplotypeScore=256.4640;InbreedingCoeff=0.0911;MQ=38.34;MQ0=2;MQRankSum=-3.435;QD=2.50;ReadPosRankSum=2.723;VQSLOD=1.3348;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:7.58:0,8,112	0/0:6,0:5:6.02:0,6,107	0/0:25,0:22:60.02:0,60,1011	0/0:22,0:17:42.14:0,42,721	0/0:19,0:20:3.01:0,3,59	0/1:13,1:16:0.10:0,0,0	0/0:22,1:23:3:0,3,59	0/1:28,8:35:99:322,0,1194	0/0:33,1:34:4.31:0,4,22	0/1:64,0:64:99:207,0,1696	0/1:20,0:21:0.03:0,0,0	0/1:36,1:37:0.44:0,0,1	1/1:36,1:37:1.96:24,2,0	0/0:30,1:31:1.41:0,1,3	0/0:42,4:46:22.01:0,22,337	0/0:61,3:64:38.19:0,38,652	0/0:14,3:17:14.03:0,14,142	0/0:7,0:7:9.43:0,9,182	0/1:16,0:16:22.34:22,0,550	0/0:31,0:31:36.12:0,36,656	0/0:28,0:28:41.18:0,41,702	0/0:22,0:22:0.47:0,0,1	0/0:17,0:17:1.36:0,1,4	0/1:16,0:16:0.09:0,0,0	0/0:24,0:24:17.55:0,18,299	0/1:32,2:34:99:273,0,1114	0/1:21,0:21:10.95:11,0,371	0/1:10,0:10:32.88:33,0,223
chr10	96448744	.	TAGACACAC	T	9370.33	PASS	AB=0.826;AC=24;AF=0.429;AN=56;BaseQRankSum=12.236;DP=1030;FS=132.364;HRun=0;HaplotypeScore=344.4396;InbreedingCoeff=0.6550;MQ=42.78;MQ0=4;MQRankSum=-13.415;QD=19.12;ReadPosRankSum=1.410;VQSLOD=0.5519;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:48.16:0,48,1608	0/0:11,0:10:27.09:0,27,1020	0/0:49,0:39:87.19:0,87,2330	0/0:41,0:34:81.77:0,82,2323	0/0:35,0:37:42.14:0,42,1507	1/1:10,6:19:19.83:501,20,0	1/1:5,19:31:3.88:397,4,0	0/0:50,0:51:12.06:0,12,3402	1/1:11,24:39:28.13:1123,28,0	0/1:30,50:83:99:2896,0,299	1/1:14,10:27:17.96:454,18,0	1/1:21,10:39:26.52:745,27,0	1/1:12,17:37:25.61:674,26,0	1/1:10,22:39:27.32:824,27,0	0/0:46,0:55:82.53:0,83,3171	0/0:63,2:75:35.83:0,36,4506	0/0:22,0:22:46.88:0,47,1482	0/0:16,0:16:43.01:0,43,1427	0/0:21,0:22:49.51:0,50,1658	0/0:47,0:49:98.87:0,99,3795	0/0:44,0:44:55.21:0,55,3272	1/1:21,10:34:35.08:946,35,0	1/1:6,22:31:21.17:569,21,0	1/1:8,8:16:3.31:84,3,0	0/0:32,0:34:58.74:0,59,2397	0/1:44,1:48:99:111,0,3673	0/1:30,0:33:21.58:22,0,2524	0/1:10,0:12:23.14:23,0,775
chr10	96448906	.	GACAC	G	13088.86	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-3.296;DP=1011;FS=14.249;HRun=0;HaplotypeScore=243.8394;InbreedingCoeff=0.9636;MQ=50.47;MQ0=8;MQRankSum=1.641;QD=21.18;ReadPosRankSum=3.671;VQSLOD=3.3495;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:44:53.92:0,54,1160	0/0:5,0:10:14.91:0,15,193	0/0:48,0:24:22.37:0,22,644	0/0:56,0:29:38.31:0,38,649	0/0:8,0:25:3.46:0,3,24	1/1:4,14:19:12.04:200,12,0	1/1:13,23:36:33.11:532,33,0	1/1:16,25:41:75.16:1084,75,0	1/1:12,29:41:60.05:885,60,0	1/1:22,22:41:74.43:1171,74,0	1/1:8,20:29:30.03:467,30,0	1/1:14,27:41:45.09:705,45,0	1/1:6,29:36:69.05:1090,69,0	1/1:8,27:36:49.93:696,50,0	0/0:15,0:51:47.07:0,47,431	0/0:47,1:48:95.89:0,96,2209	0/0:11,0:26:54.15:0,54,981	0/0:11,0:24:36.10:0,36,627	1/1:5,8:13:24.04:345,24,0	1/1:8,18:27:23.81:398,24,0	1/1:18,74:95:99:2448,134,0	1/1:9,35:42:18.06:300,18,0	1/1:7,10:17:18.02:268,18,0	1/1:13,37:51:48.32:1257,48,0	0/0:21,0:29:31.43:0,31,515	0/0:6,1:31:15.27:0,15,1002	1/1:9,28:37:53.96:895,54,0	1/1:4,7:11:21.07:348,21,0
chr10	96450233	.	TA	T	1107.44	PASS	AB=0.795;AC=14;AF=0.259;AN=54;BaseQRankSum=-1.443;DP=397;FS=0.000;HRun=13;HaplotypeScore=57.9590;InbreedingCoeff=0.5628;MQ=73.64;MQ0=2;MQRankSum=-0.575;QD=7.69;ReadPosRankSum=-1.205;VQSLOD=1.8968;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:47.97:0,48,437	0/0:2,0:2:5.78:0,6,31	0/0:25,0:16:19.99:0,20,219	0/0:21,0:13:2.99:0,3,41	0/0:21,1:22:36.63:0,37,316	0/0:18,1:19:29.27:0,29,440	0/0:9,0:11:9.35:0,9,155	1/1:18,21:39:62.24:447,62,0	0/1:8,1:9:0.76:1,0,144	0/1:15,1:17:9.12:9,0,197	0/0:14,2:17:4.92:0,5,183	0/0:7,0:7:12.02:0,12,116	0/1:6,2:8:6.89:7,0,102	0/0:5,0:5:15.02:0,15,146	0/0:12,0:12:29.76:0,30,187	0/0:11,0:11:24.02:0,24,224	0/0:20,0:20:57.08:0,57,548	0/0:15,0:17:26.78:0,27,246	1/1:8,11:18:24.37:194,24,0	1/1:3,11:17:10.19:170,10,0	1/1:0,3:3:8.95:66,9,0	./.	0/0:7,1:8:17.92:0,18,160	0/0:3,0:3:9.01:0,9,87	0/0:13,0:13:38.14:0,38,248	0/0:19,0:19:48.58:0,49,273	1/1:8,10:18:29.76:216,30,0	0/1:4,9:14:17.09:168,0,17
chr10	96452126	.	AATTATATTTAAAAAGTAATAAACATGGAAGGTTTTTTTTACATTATTTCAG	A	5847.77	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=6.982;DP=424;FS=16.816;HRun=0;HaplotypeScore=499.4851;InbreedingCoeff=0.8718;MQ=77.77;MQ0=2;MQRankSum=-5.366;QD=208.85;ReadPosRankSum=4.220;VQSLOD=3.1551;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:60.21:0,60,8729	1/1:0,5:5:9.03:1174,9,0	0/0:12,0:12:36.10:0,36,1665	0/0:14,0:14:35.69:0,36,2108	1/1:0,5:5:9.03:701,9,0	0/0:23,0:23:69.24:0,69,12345	0/0:13,0:13:39.13:0,39,4295	0/0:30,0:29:90.31:0,90,7269	0/0:16,0:16:48.16:0,48,7700	0/0:23,0:23:69.24:0,69,9700	0/0:19,0:19:57.20:0,57,9784	0/0:19,0:19:54.19:0,54,7659	0/0:26,0:26:78.27:0,78,11116	0/0:17,0:17:51.17:0,51,5851	1/1:0,2:2:3.01:391,3,0	0/0:17,0:17:51.17:0,51,6064	1/1:0,2:2:3.01:391,3,0	1/1:0,2:2:6.02:783,6,0	0/0:15,0:15:45.15:0,45,3414	0/0:30,0:30:90.31:0,90,12828	0/0:11,0:11:33.11:0,33,5588	0/0:15,0:15:45.14:0,45,5465	0/0:26,0:26:78.25:0,78,12451	0/0:10,0:10:27.09:0,27,3610	1/1:0,5:5:9.03:1163,9,0	1/1:0,5:5:12.04:1246,12,0	0/0:27,0:27:81.28:0,81,12495	0/0:13,0:13:39.13:0,39,7120
chr10	96453814	.	CA	C	10287.17	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.044;DP=502;FS=49.663;HRun=9;HaplotypeScore=61.6262;InbreedingCoeff=0.9833;MQ=75.91;MQ0=0;MQRankSum=-5.998;QD=21.61;ReadPosRankSum=4.860;VQSLOD=2.0612;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,14:20:48.02:439,48,0	1/1:0,6:6:18.01:165,18,0	0/0:12,0:13:18.40:0,18,281	0/0:13,0:13:30.06:0,30,311	1/1:1,28:29:68.03:653,68,0	1/1:2,15:17:39.02:357,39,0	1/1:1,12:13:24.01:220,24,0	1/1:6,23:29:59.81:511,60,0	1/1:1,16:17:48.03:439,48,0	1/1:2,16:18:48.02:439,48,0	1/1:3,13:16:36.01:329,36,0	1/1:1,19:20:48.02:439,48,0	1/1:0,18:18:45.02:412,45,0	1/1:2,13:15:39.02:357,39,0	1/1:2,8:10:21.01:192,21,0	1/1:6,16:22:48.01:439,48,0	1/1:3,13:16:30.90:276,31,0	1/1:5,23:28:35.75:547,36,0	1/1:4,9:13:26.97:242,27,0	1/1:1,14:15:38.97:349,39,0	1/1:1,13:14:33.02:302,33,0	1/1:1,8:9:18:165,18,0	1/1:4,17:21:41.60:384,42,0	1/1:2,16:18:45.02:412,45,0	1/1:0,17:17:48.03:439,48,0	1/1:5,22:27:69.01:627,69,0	1/1:1,29:30:78.04:714,78,0	1/1:2,16:18:48.01:439,48,0
chr10	96453859	.	T	TA	445.79	PASS	AB=0.877;AC=6;AF=0.107;AN=56;BaseQRankSum=-2.087;DP=506;FS=9.506;HRun=12;HaplotypeScore=77.7845;InbreedingCoeff=0.3807;MQ=72.75;MQ0=2;MQRankSum=-1.536;QD=4.60;ReadPosRankSum=-2.397;VQSLOD=0.6196;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:7,16:23:4.20:278,0,4	0/0:4,0:4:11.93:0,12,88	0/0:29,0:19:1.96:0,2,67	0/1:19,0:8:4.21:16,0,4	0/0:23,0:24:44.65:0,45,345	0/0:13,0:13:20.18:0,20,167	0/0:7,0:7:14.88:0,15,107	0/0:26,0:27:61.38:0,61,427	0/0:18,0:18:44.70:0,45,328	0/0:18,0:20:18.18:0,18,245	0/1:21,2:23:4.98:5,0,296	0/0:18,0:18:43.10:0,43,279	0/0:22,0:22:44.50:0,44,326	0/0:11,0:11:32.81:0,33,241	0/0:18,0:19:49.71:0,50,351	1/1:3,9:12:27.04:262,27,0	0/0:18,0:19:38.26:0,38,251	0/0:28,1:30:41.48:0,41,452	0/0:17,1:18:6.63:0,7,210	0/0:20,0:20:35.46:0,35,296	0/0:9,0:9:17.89:0,18,131	0/0:9,0:10:19.88:0,20,137	0/0:20,0:20:26.56:0,27,277	0/0:13,0:13:35.79:0,36,262	0/0:18,0:18:29.78:0,30,217	0/1:19,0:20:5.35:5,0,167	0/0:24,0:27:52.74:0,53,348	0/0:13,0:13:29.61:0,30,210
chr10	96454926	.	A	AAGAAAGAG	2494.98	PASS	AB=0.981;AC=22;AF=0.393;AN=56;BaseQRankSum=8.035;DP=474;FS=3.082;HRun=0;HaplotypeScore=144.7343;InbreedingCoeff=-0.5367;MQ=58.11;MQ0=3;MQRankSum=-4.384;QD=6.91;ReadPosRankSum=-2.111;VQSLOD=2.4228;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:39.04:0,39,577	0/0:5,0:5:2.42:0,2,21	0/0:17,0:13:23.94:0,24,218	0/1:17,0:10:1.62:2,0,49	0/1:21,0:21:71.87:256,0,72	0/1:20,0:20:68.67:69,0,119	0/1:16,0:12:31.21:53,0,31	0/1:27,0:27:27.09:27,0,308	0/1:16,0:15:5.01:155,0,5	0/1:20,0:19:91.83:181,0,92	0/1:13,0:13:28.94:101,0,29	0/1:13,0:11:53.04:194,0,53	0/1:11,0:11:38.91:78,0,39	0/1:24,0:24:99:238,0,119	0/1:18,0:18:49.48:202,0,49	0/0:10,0:10:17.95:0,18,256	0/0:21,0:21:33.04:0,33,561	0/0:26,0:26:45.40:0,45,592	0/1:12,0:12:81.30:81,0,132	0/1:23,0:23:38.33:172,0,38	0/1:11,0:11:17.13:17,0,42	0/1:16,0:16:40.09:40,0,124	0/1:19,0:18:63.27:63,0,126	0/1:13,0:13:3.93:330,0,4	0/1:18,0:18:45.67:46,0,57	0/1:3,7:12:0.63:273,0,1	0/1:16,0:16:65.03:65,0,88	0/1:5,0:4:6.05:6,0,35
chr10	96454930	.	AAGAGAGAG	A	592.68	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=-1.556;DP=489;FS=1.299;HRun=0;HaplotypeScore=134.2831;InbreedingCoeff=0.5530;MQ=57.17;MQ0=7;MQRankSum=-4.525;QD=13.17;ReadPosRankSum=0.379;VQSLOD=2.8610;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,26:33:21.07:476,21,0	0/0:6,0:6:6.02:0,6,100	0/0:17,0:13:2.98:0,3,21	./.	0/0:11,0:24:21.07:0,21,545	0/0:21,0:21:24.03:0,24,533	0/0:16,0:12:15.05:0,15,303	0/0:22,0:22:36.09:0,36,512	0/0:16,0:15:19.86:0,20,471	0/0:21,0:20:45.15:0,45,1105	0/0:13,0:13:21.06:0,21,554	0/0:15,0:13:12.02:0,12,250	0/0:11,0:11:3.01:0,3,85	0/0:22,0:22:7.25:0,7,78	0/0:7,0:19:27.09:0,27,789	1/1:4,6:10:8.96:227,9,0	0/0:5,0:21:29.94:0,30,261	0/0:12,0:26:28.59:0,29,231	0/0:14,0:14:21.04:0,21,369	0/0:25,0:25:38:0,38,895	0/0:11,0:10:6.02:0,6,164	0/0:16,0:16:14.89:0,15,334	0/0:19,0:18:3.01:0,3,91	0/0:14,0:14:11.71:0,12,299	0/0:5,0:21:15.51:0,16,361	0/0:12,0:13:35.66:0,36,805	0/0:16,0:16:3.01:0,3,107	0/0:6,0:4:6.02:0,6,79
chr10	96454960	.	G	GAGAGAGAGAGAGAGAGAA	9340.02	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-2.301;DP=540;FS=16.440;HRun=0;HaplotypeScore=218.4518;InbreedingCoeff=0.6959;MQ=52.71;MQ0=6;MQRankSum=-2.210;QD=24.01;ReadPosRankSum=-2.265;VQSLOD=2.4176;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:41.90:0,42,767	0/1:7,0:7:7.01:7,0,107	0/0:8,0:6:14.60:0,15,147	0/0:8,0:5:15.04:0,15,171	0/1:19,0:18:65.38:119,0,65	1/1:22,0:22:36.06:559,36,0	1/1:19,0:15:41.83:472,42,0	1/1:33,0:33:65.02:925,65,0	1/1:17,0:16:30.52:639,31,0	1/1:25,0:24:63.12:1176,63,0	1/1:23,0:23:57.88:792,58,0	1/1:16,0:14:32.79:729,33,0	1/1:2,1:21:3.48:244,3,0	1/1:17,0:17:18.38:162,18,0	0/0:19,0:19:24.42:0,24,249	0/0:12,0:12:23.97:0,24,450	0/0:24,0:23:42.07:0,42,1211	0/0:24,0:24:31.24:0,31,960	1/1:13,0:12:29.52:415,30,0	1/1:32,0:32:61.50:863,61,0	1/1:16,0:15:27.47:381,27,0	1/1:14,0:14:25.37:391,25,0	1/1:2,13:24:4.84:238,5,0	1/1:14,0:14:24.46:457,24,0	0/0:21,0:21:10.54:0,11,177	0/1:19,0:19:99:240,0,157	1/1:1,10:21:3.01:255,3,0	1/1:15,0:14:31.25:277,31,0
chr10	96457070	.	G	GA	8996.14	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-17.514;DP=736;FS=0.615;HRun=4;HaplotypeScore=65.1820;InbreedingCoeff=0.9987;MQ=80.41;MQ0=0;MQRankSum=-1.926;QD=35.98;ReadPosRankSum=4.218;VQSLOD=4.9680;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,43:44:99:1457,108,0	1/1:0,13:13:36.12:492,36,0	0/0:28,0:27:72.17:0,72,796	0/0:16,0:16:40.93:0,41,443	1/1:4,16:20:48.16:657,48,0	0/0:25,0:25:66.16:0,66,735	0/0:19,0:19:48.14:0,48,544	0/0:32,0:32:84.24:0,84,952	0/0:21,0:21:63.16:0,63,703	0/0:28,0:28:81.21:0,81,902	0/0:19,0:19:57.16:0,57,647	0/0:50,0:50:99:0,147,1666	0/0:29,0:29:81.20:0,81,899	0/0:26,0:26:78.22:0,78,885	1/1:2,44:46:99:1723,126,0	1/1:4,25:29:44.22:992,44,0	1/1:2,25:27:75.25:1026,75,0	1/1:1,24:25:66.22:903,66,0	0/0:23,0:23:63.18:0,63,713	0/0:27,0:27:75.21:0,75,850	0/0:31,0:31:90.26:0,90,1021	0/0:17,0:17:48.14:0,48,544	0/0:21,0:21:60.17:0,60,680	0/0:16,0:16:45.09:0,45,496	1/1:1,16:17:42.14:575,42,0	1/1:0,29:29:87.26:1171,87,0	0/0:52,0:52:99:0,150,1691	0/0:6,0:6:18.05:0,18,204
chr10	96458335	.	T	TTCTCTC	6722.73	PASS	AB=0.950;AC=40;AF=0.714;AN=56;BaseQRankSum=-4.039;DP=710;FS=13.159;HRun=0;HaplotypeScore=193.7048;InbreedingCoeff=0.4088;MQ=64.40;MQ0=8;MQRankSum=-0.371;QD=11.79;ReadPosRankSum=0.892;VQSLOD=3.0016;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:26.93:0,27,321	1/1:16,0:16:15.05:271,15,0	0/0:25,0:17:3.01:0,3,60	0/0:32,0:21:12.04:0,12,224	1/1:21,0:21:12.01:209,12,0	1/1:17,0:17:3.01:75,3,0	1/1:25,0:24:4.57:312,5,0	1/1:41,0:40:33.79:414,34,0	1/1:21,1:22:15.02:200,15,0	1/1:25,0:24:22.63:451,23,0	0/1:18,0:18:5.72:167,0,6	0/1:24,0:24:9.59:143,0,10	1/1:15,0:15:17.24:319,17,0	1/1:25,0:25:21.04:346,21,0	1/1:25,0:25:9.01:177,9,0	0/0:25,0:25:42.03:0,42,610	0/1:28,0:28:0:0,0,0	0/0:15,0:15:5.91:0,6,58	0/1:26,0:26:41.70:157,0,42	1/1:21,0:21:14.97:297,15,0	0/1:29,0:28:20.74:344,0,21	1/1:20,0:18:8.97:218,9,0	1/1:20,0:19:8.56:199,9,0	0/1:16,10:27:5.27:14,0,5	1/1:37,0:37:15.99:314,16,0	1/1:36,0:35:53.60:1184,54,0	1/1:32,0:32:4.45:620,4,0	1/1:19,0:18:12.04:290,12,0
chr10	96458338	.	TC	T	279.75	PASS	AB=0.718;AC=2;AF=0.036;AN=56;BaseQRankSum=5.735;DP=707;FS=6.166;HRun=1;HaplotypeScore=141.4034;InbreedingCoeff=0.2816;MQ=62.50;MQ0=10;MQRankSum=-0.581;QD=4.18;ReadPosRankSum=0.690;VQSLOD=0.2473;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,12:42:42.61:117,0,43	0/0:18,0:18:25.57:0,26,339	0/0:23,0:15:45.13:0,45,554	0/0:32,0:21:59.93:0,60,771	0/0:19,0:19:36.12:0,36,489	0/0:16,0:16:33.09:0,33,420	0/0:27,0:26:51.17:0,51,692	0/0:40,0:39:99:0,115,1456	0/0:21,0:21:26.70:0,27,359	0/0:24,0:23:63.02:0,63,789	0/0:19,0:19:18.06:0,18,257	0/0:25,0:25:30.73:0,31,410	0/0:16,0:16:22.84:0,23,421	0/0:24,0:24:36.37:0,36,589	0/0:24,0:24:33.09:0,33,422	0/1:12,13:25:2.10:251,0,2	0/0:32,0:32:21.40:0,21,243	0/0:16,0:16:19.35:0,19,204	0/0:24,0:24:70.85:0,71,859	0/0:21,0:21:37:0,37,474	0/0:29,0:27:54.16:0,54,731	0/0:18,0:16:24.02:0,24,331	0/0:21,0:20:30.10:0,30,408	0/0:28,0:27:23.42:0,23,271	0/0:34,0:34:47.90:0,48,623	0/0:40,0:38:99:0,108,1342	0/0:31,0:31:79.85:0,80,996	0/0:18,0:17:36.12:0,36,470
chr10	96458340	.	TCTC	T	495.66	PASS	AB=0.718;AC=2;AF=0.036;AN=56;BaseQRankSum=5.185;DP=707;FS=13.755;HRun=0;HaplotypeScore=158.6098;InbreedingCoeff=-0.0354;MQ=60.05;MQ0=11;MQRankSum=0.108;QD=7.40;ReadPosRankSum=2.138;VQSLOD=1.9603;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,11:42:80.07:177,0,80	0/0:19,0:19:28.01:0,28,444	0/0:21,0:13:39.13:0,39,519	0/0:31,0:20:57.15:0,57,830	0/0:19,0:19:36.10:0,36,627	0/0:15,0:15:30.09:0,30,433	0/0:29,0:28:51.64:0,52,899	0/0:39,0:38:99:0,113,1758	0/0:20,0:20:23.57:0,24,434	0/0:23,0:22:63.21:0,63,1084	0/0:20,0:20:18.06:0,18,352	0/0:25,0:25:30.73:0,31,506	0/0:17,0:17:20.62:0,21,575	0/0:24,0:24:28.91:0,29,744	0/0:26,0:26:39.13:0,39,593	0/1:12,12:25:21.72:407,0,22	0/0:34,0:34:21.05:0,21,245	0/0:17,0:17:6.71:0,7,179	0/0:26,0:25:75.20:0,75,1159	0/0:21,0:21:37.36:0,37,583	0/0:28,0:26:51.17:0,51,957	0/0:17,0:15:21.06:0,21,376	0/0:21,0:20:30.08:0,30,502	0/0:28,0:27:24.08:0,24,364	0/0:33,0:33:44.89:0,45,705	0/0:40,0:38:99:0,110,1937	0/0:29,0:29:75.06:0,75,1279	0/0:18,0:17:36.12:0,36,562
chr10	96458360	.	TCTCTCTCACACA	T	150.77	PASS	AB=0.810;AC=5;AF=0.089;AN=56;BaseQRankSum=0.385;DP=644;FS=9.383;HRun=0;HaplotypeScore=212.9651;InbreedingCoeff=-0.0933;MQ=46.03;MQ0=20;MQRankSum=-2.642;QD=1.20;ReadPosRankSum=-1.701;VQSLOD=1.5710;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:49:30.30:0,30,957	0/0:17,0:17:2.55:0,3,276	0/0:9,0:3:9.03:0,9,152	0/0:15,0:7:18.06:0,18,395	0/0:18,0:18:27.07:0,27,568	0/0:14,0:14:15.52:0,16,433	0/0:26,0:24:32.58:0,33,826	0/1:30,0:29:0.99:1,0,1012	0/0:21,0:19:11.66:0,12,360	0/0:21,0:19:35.89:0,36,1146	0/0:21,0:21:16.77:0,17,427	0/0:23,0:23:12.51:0,13,302	0/0:16,0:15:30.51:0,31,780	0/0:22,0:22:27.09:0,27,696	0/0:25,0:25:30.52:0,31,656	0/1:29,0:27:3.77:4,0,972	0/1:4,26:29:11.01:11,0,38	0/1:1,17:18:53.70:221,0,54	0/1:19,0:18:7.61:8,0,748	0/0:20,0:19:25.42:0,25,584	0/0:24,0:21:32.60:0,33,897	0/0:23,0:21:18.07:0,18,372	0/0:17,0:16:12.23:0,12,318	0/0:31,0:30:33.11:0,33,943	0/0:27,0:27:24.42:0,24,517	0/0:32,0:30:88.76:0,89,2351	0/0:22,0:22:54.62:0,55,1520	0/0:21,0:19:21.04:0,21,386
chr10	96458362	.	TCTCTCA	T	358.03	PASS	AB=0.959;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.004;DP=649;FS=3.444;HRun=0;HaplotypeScore=177.5978;InbreedingCoeff=-0.1146;MQ=45.87;MQ0=21;MQRankSum=3.590;QD=1.89;ReadPosRankSum=1.671;VQSLOD=2.2753;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,21:49:36.34:36,0,146	0/1:17,0:17:47.15:47,0,155	0/0:9,0:3:8.90:0,9,73	0/0:13,0:5:14.78:0,15,215	0/1:19,0:19:42.85:43,0,298	0/0:13,0:13:14.80:0,15,193	0/0:27,0:25:32.53:0,33,509	0/0:32,0:31:51.93:0,52,707	0/0:21,0:19:11.56:0,12,242	0/0:23,0:20:52.82:0,53,612	0/0:21,0:21:16.56:0,17,243	0/0:22,0:22:12.51:0,13,198	0/0:16,0:15:23.95:0,24,361	0/0:24,0:24:24.02:0,24,434	0/1:26,0:26:66.57:67,0,168	0/1:29,0:27:99:169,0,108	0/0:29,0:28:1.68:0,2,5	0/1:18,0:18:12.82:75,0,13	0/0:19,0:18:31.08:0,31,435	0/0:20,0:19:24.51:0,25,354	0/0:25,0:22:35.95:0,36,573	0/0:25,0:23:20.60:0,21,267	0/0:19,0:17:11.86:0,12,200	0/0:30,0:30:35.78:0,36,347	0/1:27,0:27:50.10:50,0,224	0/0:31,0:29:6.52:0,7,1249	0/0:22,0:22:53.80:0,54,843	0/0:18,0:17:15.03:0,15,215
chr10	96458382	.	ACACACACT	A	954.84	PASS	AB=0.962;AC=10;AF=0.192;AN=52;BaseQRankSum=5.695;DP=697;FS=14.700;HRun=0;HaplotypeScore=210.6020;InbreedingCoeff=-0.2519;MQ=47.26;MQ0=26;MQRankSum=-5.513;QD=3.87;ReadPosRankSum=3.022;VQSLOD=1.5579;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:50:74.31:0,74,1788	0/0:16,0:16:13.39:0,13,243	./.	./.	0/0:22,0:21:22.22:0,22,560	0/0:18,0:18:32.80:0,33,784	0/0:34,0:32:38.40:0,38,818	0/1:22,20:38:99:567,0,251	0/0:26,0:24:16.99:0,17,336	0/1:27,0:22:99:129,0,929	0/1:20,0:20:22.57:23,0,341	0/0:22,0:22:11.75:0,12,211	0/1:16,0:15:13.78:14,0,478	0/1:23,0:23:7.02:7,0,108	0/0:26,0:26:33.55:0,34,675	0/0:27,0:25:57.15:0,57,1505	0/0:27,0:26:4.41:0,4,52	0/1:23,0:23:41.17:41,0,160	0/1:16,1:16:99:192,0,113	0/0:29,0:28:7.24:0,7,999	0/1:37,0:31:44.09:44,0,520	0/0:34,0:32:25.25:0,25,338	0/0:22,0:21:20.49:0,20,318	0/0:32,0:32:33.13:0,33,1466	0/0:25,0:25:7.92:0,8,435	0/0:35,0:31:1.05:0,1,1070	0/1:25,0:25:69.68:70,0,695	0/1:17,0:16:0.43:0,0,102
chr10	96459308	.	C	CCCT	4266.33	PASS	AB=0.938;AC=52;AF=0.963;AN=54;BaseQRankSum=-2.276;DP=250;FS=11.931;HRun=0;HaplotypeScore=287.3469;InbreedingCoeff=-0.0985;MQ=58.71;MQ0=0;MQRankSum=-2.397;QD=17.20;ReadPosRankSum=-0.548;VQSLOD=3.3150;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,1:14:24.08:372,24,0	1/1:7,0:7:8.53:84,9,0	0/1:5,0:4:25.13:92,0,25	0/1:6,0:6:12.40:48,0,12	1/1:12,0:12:18.06:244,18,0	1/1:10,0:10:4.83:44,5,0	1/1:11,0:11:15.05:241,15,0	1/1:4,0:4:9.03:132,9,0	1/1:6,0:6:3.48:34,3,0	1/1:7,0:7:9.03:119,9,0	1/1:7,0:7:3.19:113,3,0	1/1:11,0:11:9.27:171,9,0	1/1:4,0:4:6.02:90,6,0	1/1:11,1:12:13.77:138,14,0	1/1:8,0:8:12.04:184,12,0	1/1:12,0:12:12.51:167,13,0	1/1:2,0:2:3.01:40,3,0	1/1:6,0:6:6.02:92,6,0	1/1:5,0:5:12.04:178,12,0	1/1:19,0:19:9.38:331,9,0	./.	1/1:9,0:9:7.05:136,7,0	1/1:10,2:12:13.63:208,14,0	1/1:7,0:7:9.03:116,9,0	1/1:16,0:16:15.33:208,15,0	1/1:10,0:10:27.07:371,27,0	1/1:19,0:18:17.55:202,18,0	1/1:6,0:6:9.03:112,9,0
chr10	96462415	.	G	GC	10677.24	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-14.143;DP=637;FS=1.023;HRun=6;HaplotypeScore=61.3036;InbreedingCoeff=0.9710;MQ=85.76;MQ0=0;MQRankSum=-2.908;QD=29.91;ReadPosRankSum=-0.863;VQSLOD=5.1031;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,99,1010	0/0:5,0:5:15.03:0,15,153	0/0:23,0:23:39.04:0,39,379	0/0:24,0:24:44.43:0,44,475	0/0:19,0:19:48.09:0,48,482	1/1:2,17:19:42.13:528,42,0	1/1:2,40:42:99:1321,105,0	1/1:7,21:28:63.11:738,63,0	1/1:4,21:25:60.19:753,60,0	1/1:1,16:17:45.14:566,45,0	1/1:2,7:8:21.07:263,21,0	1/1:0,32:32:72.23:906,72,0	1/1:3,20:23:57.18:715,57,0	1/1:0,17:17:45.14:566,45,0	0/0:41,0:41:99:0,114,1156	0/0:22,0:22:63.14:0,63,642	0/0:32,0:32:81.16:0,81,819	0/0:23,0:23:63.12:0,63,635	1/1:3,10:13:36.11:441,36,0	1/1:1,11:12:30.10:377,30,0	1/1:5,36:41:93.30:1170,93,0	1/1:1,7:8:18.06:226,18,0	1/1:0,14:15:36.11:447,36,0	1/1:6,27:33:78.25:981,78,0	0/0:21,0:21:48.10:0,48,489	0/0:29,0:29:81.17:0,81,820	1/1:2,17:19:51.16:642,51,0	1/1:1,3:4:3.01:38,3,0
chr10	96462663	.	A	AGCAGGCAGGCAG	2597.26	PASS	AB=0.978;AC=37;AF=0.771;AN=48;BaseQRankSum=0.551;DP=397;FS=0.000;HRun=0;HaplotypeScore=122.8838;InbreedingCoeff=0.4601;MQ=52.83;MQ0=8;MQRankSum=-1.194;QD=7.71;ReadPosRankSum=-0.637;VQSLOD=1.7582;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:14.94:0,15,271	0/0:5,0:5:1.12:0,1,3	./.	0/0:5,0:5:5.99:0,6,60	1/1:1,0:2:3.01:45,3,0	1/1:14,1:16:26.76:478,27,0	1/1:44,0:43:36.88:377,37,0	./.	1/1:14,0:14:18.02:248,18,0	1/1:9,0:8:5.96:43,6,0	1/1:4,2:6:5.98:58,6,0	1/1:19,6:27:5.12:181,5,0	1/1:12,0:11:9:99,9,0	1/1:9,6:15:3.01:174,3,0	0/1:13,0:13:6.29:56,0,6	0/0:11,0:11:15.04:0,15,256	1/1:19,0:31:6.02:152,6,0	1/1:19,0:26:6.02:153,6,0	./.	./.	1/1:31,0:30:14.57:186,15,0	1/1:8,0:8:3.01:32,3,0	0/1:5,0:4:0:0,0,0	1/1:19,17:37:0.47:1,0,0	1/1:6,0:6:6:54,6,0	0/1:11,0:9:0:0,0,0	1/1:14,0:14:12.02:218,12,0	1/1:6,0:5:3.01:174,3,0
chr10	96462954	.	CT	C	1528.67	PASS	AB=0.978;AC=9;AF=0.161;AN=56;BaseQRankSum=6.802;DP=609;FS=9.872;HRun=3;HaplotypeScore=73.8424;InbreedingCoeff=0.3507;MQ=73.65;MQ0=0;MQRankSum=-2.308;QD=8.54;ReadPosRankSum=0.867;VQSLOD=0.0914;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:40.27:81,0,40	0/0:16,0:16:36.02:0,36,131	0/0:18,0:18:54.02:0,54,668	0/0:21,0:20:39.85:0,40,595	0/1:10,0:10:25.35:25,0,33	0/0:29,0:29:87.27:0,87,1199	0/0:21,0:21:57.17:0,57,784	0/0:29,0:29:67.54:0,68,975	0/0:21,0:21:63.13:0,63,812	0/0:24,0:24:72.23:0,72,1015	0/0:8,0:8:21.04:0,21,265	0/0:27,0:27:72.21:0,72,983	0/0:20,0:20:60.16:0,60,803	0/0:24,0:24:72.21:0,72,980	0/1:25,1:26:63.60:174,0,64	0/1:34,0:34:10.33:22,0,10	1/1:1,20:21:45.14:555,45,0	1/1:1,24:25:63.20:777,63,0	0/0:22,0:22:63.18:0,63,840	0/0:14,0:14:39.13:0,39,560	0/0:18,0:18:54.16:0,54,752	0/0:28,0:28:84.24:0,84,1149	0/0:20,0:20:60.18:0,60,827	0/0:17,0:17:51.14:0,51,695	0/0:18,0:18:13.71:0,14,98	0/1:23,2:25:46.78:47,0,123	0/0:27,0:27:81.22:0,81,1107	0/0:8,0:8:21.07:0,21,301
chr10	96462957	.	TA	T	1902.44	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.180;DP=614;FS=3.584;HRun=9;HaplotypeScore=73.2385;InbreedingCoeff=0.9953;MQ=74.69;MQ0=0;MQRankSum=-2.657;QD=16.26;ReadPosRankSum=2.962;VQSLOD=4.1128;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,34:38:87.04:796,87,0	0/0:15,0:15:45.13:0,45,518	0/0:18,0:18:42.03:0,42,442	0/0:21,0:20:42.10:0,42,456	0/0:9,0:9:21.06:0,21,240	0/0:29,0:29:78.23:0,78,900	0/0:19,0:19:54.14:0,54,612	0/0:24,1:25:29.84:0,30,596	0/0:24,0:24:63.14:0,63,689	0/0:25,0:25:72.16:0,72,798	0/0:7,0:7:18.04:0,18,198	0/0:25,0:25:63.19:0,63,727	0/0:21,0:21:54.11:0,54,589	0/0:25,0:25:66.18:0,66,753	0/0:25,0:25:44.79:0,45,592	1/1:1,32:33:93.05:851,93,0	1/1:20,0:20:40.82:183,41,0	1/1:26,0:26:39.99:233,40,0	0/0:23,0:23:63.17:0,63,710	0/0:15,0:15:42.11:0,42,474	0/0:18,0:18:51.11:0,51,574	0/0:29,0:29:81.22:0,81,916	0/0:22,0:22:63.15:0,63,699	0/0:17,0:17:45.12:0,45,510	0/0:18,0:18:51.14:0,51,580	0/0:29,0:29:63.07:0,63,828	0/0:31,0:31:87.06:0,87,943	0/0:7,0:7:21.06:0,21,242
chr10	96464097	.	A	AAC	453.06	PASS	AB=0.776;AC=4;AF=0.071;AN=56;BaseQRankSum=1.772;DP=552;FS=29.000;HRun=0;HaplotypeScore=77.2793;InbreedingCoeff=0.5056;MQ=53.22;MQ0=23;MQRankSum=0.676;QD=4.82;ReadPosRankSum=5.069;VQSLOD=0.9282;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:8,18:31:4.89:281,0,5	0/0:2,0:2:5.81:0,6,34	0/0:53,0:4:11.53:0,12,78	0/1:44,0:13:1.09:1,0,102	0/0:38,0:38:55.07:0,55,500	0/0:21,0:21:58.16:0,58,490	0/0:10,0:10:22.55:0,23,191	0/0:38,0:38:82.24:0,82,644	0/0:12,0:12:27.42:0,27,227	0/0:24,0:23:64:0,64,491	0/0:28,0:27:66.45:0,66,517	0/0:12,0:12:16.06:0,16,121	0/0:7,0:7:11.22:0,11,112	0/0:10,0:10:21.72:0,22,163	0/0:5,0:5:5.03:0,5,37	1/1:6,3:18:26.07:276,26,0	0/0:26,0:25:66.71:0,67,504	0/0:23,0:21:51.64:0,52,390	0/0:18,0:17:46.51:0,47,410	0/0:14,0:14:31.48:0,31,237	0/0:6,0:5:14.95:0,15,120	0/0:5,0:5:14.23:0,14,92	0/0:12,0:12:17.60:0,18,149	0/0:5,0:5:13.82:0,14,116	0/0:21,0:21:25.92:0,26,219	0/0:26,0:24:55.69:0,56,390	0/0:24,0:23:56.21:0,56,447	0/0:18,0:16:39.37:0,39,280
chr10	96464924	.	A	AT	1521.33	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=-8.967;DP=641;FS=31.719;HRun=8;HaplotypeScore=93.4689;InbreedingCoeff=0.6375;MQ=64.21;MQ0=0;MQRankSum=0.164;QD=18.55;ReadPosRankSum=-0.881;VQSLOD=1.7683;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,30:37:90.23:1022,90,0	0/0:13,0:13:33.02:0,33,302	0/1:12,0:11:36.53:37,0,109	0/1:9,0:8:14.04:14,0,16	0/0:27,0:28:80.08:0,80,720	0/0:23,0:23:57.02:0,57,522	0/0:17,0:17:51.03:0,51,466	0/0:25,0:25:66.01:0,66,597	0/0:26,0:26:75.03:0,75,686	0/0:29,0:29:87.05:0,87,796	0/0:18,0:18:45.02:0,45,412	0/0:29,0:29:66.01:0,66,598	0/0:28,0:28:81.04:0,81,741	0/0:19,0:19:50.99:0,51,458	0/0:35,0:34:86.08:0,86,775	1/1:5,18:24:29.68:584,30,0	0/0:36,0:36:96.05:0,96,879	0/0:29,0:29:71.98:0,72,651	0/0:19,0:19:51.03:0,51,467	0/0:26,0:26:69.02:0,69,627	0/0:17,0:17:48.03:0,48,439	0/0:12,0:12:33.02:0,33,302	0/0:22,0:22:60.03:0,60,549	0/0:18,0:18:54.03:0,54,494	0/0:24,0:23:66.03:0,66,604	0/0:34,0:34:85.28:0,85,772	0/0:18,0:18:48.03:0,48,439	0/0:14,0:14:39.02:0,39,357
chr10	96465460	.	C	CCATCTCTG	8322.95	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-7.344;DP=611;FS=4.330;HRun=0;HaplotypeScore=152.1728;InbreedingCoeff=0.9615;MQ=74.94;MQ0=0;MQRankSum=-10.260;QD=59.03;ReadPosRankSum=-1.919;VQSLOD=4.3453;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,111,2822	0/0:7,0:7:18.06:0,18,481	0/0:18,0:18:39.13:0,39,890	0/0:15,0:15:39.12:0,39,1031	0/0:33,0:33:87.30:0,87,2287	0/0:25,0:25:63.20:0,63,1603	0/0:27,0:27:63.21:0,63,1608	1/1:22,14:38:69.21:2207,69,0	0/0:13,0:13:33.11:0,33,829	0/0:29,0:29:78.27:0,78,2037	0/0:20,0:20:51.16:0,51,1280	0/0:23,0:23:69.24:0,69,1773	0/0:20,0:20:57.18:0,57,1403	0/0:18,0:18:54.19:0,54,1448	0/0:19,0:19:48.16:0,48,1201	0/0:19,0:19:54.19:0,54,1451	0/0:22,0:22:63.22:0,63,1692	0/0:31,0:31:81.23:0,81,1996	1/1:15,8:24:27.09:1074,27,0	1/1:10,15:26:39.13:1670,39,0	1/1:17,10:28:24.08:1012,24,0	0/0:21,0:21:51.18:0,51,1376	0/0:20,0:20:60.21:0,60,1603	0/0:14,0:14:39.13:0,39,1048	0/0:14,0:14:39.13:0,39,1042	0/0:21,0:21:60.20:0,60,1505	1/1:6,15:23:54.18:2311,54,0	1/1:2,0:2:3.01:48,3,0
chr10	96466784	.	A	AC	696.90	PASS	AB=0.984;AC=21;AF=0.375;AN=56;BaseQRankSum=7.386;DP=465;FS=28.003;HRun=0;HaplotypeScore=76.8245;InbreedingCoeff=-0.0054;MQ=57.20;MQ0=8;MQRankSum=2.831;QD=2.70;ReadPosRankSum=6.912;VQSLOD=0.8496;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:33.98:0,34,209	1/1:3,0:2:4.46:19,4,0	0/0:32,0:11:26.89:0,27,225	0/0:16,0:9:5.39:0,5,83	0/1:22,0:22:1.68:24,0,2	0/1:12,0:11:35.23:56,0,35	0/0:17,0:16:0.88:0,1,60	0/1:17,0:17:40.29:40,0,133	0/1:18,0:18:7.87:30,0,8	0/1:15,0:14:13.47:13,0,64	0/1:17,0:15:3.46:40,0,3	0/1:14,0:14:1.48:1,0,66	0/1:13,0:13:47.82:56,0,48	0/0:16,0:13:6.86:0,7,44	0/1:12,1:13:1.22:64,0,1	0/0:15,0:15:25.24:0,25,150	0/0:11,0:11:10.34:0,10,87	0/0:20,0:19:16.26:0,16,154	0/1:25,0:22:77.88:119,0,78	0/1:12,0:12:5.01:5,0,85	0/0:15,0:13:1.36:0,1,3	1/1:18,0:18:0.51:74,1,0	0/1:16,1:17:11.44:67,0,11	0/1:10,1:11:8.36:34,0,8	1/1:4,8:12:2.88:49,3,0	1/1:19,0:19:11.90:158,12,0	0/0:8,0:8:3.22:0,3,13	0/0:16,0:16:14.15:0,14,136
chr10	96466786	.	A	AC	1431.56	PASS	AB=0.987;AC=40;AF=0.714;AN=56;BaseQRankSum=-1.688;DP=402;FS=25.321;HRun=0;HaplotypeScore=81.4301;InbreedingCoeff=0.3365;MQ=64.30;MQ0=7;MQRankSum=0.253;QD=5.01;ReadPosRankSum=5.059;VQSLOD=1.2491;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:17.97:0,18,81	1/1:3,0:2:4.43:19,4,0	0/0:34,0:13:26.91:0,27,228	0/0:17,0:10:22.75:0,23,154	1/1:19,1:20:6:52,6,0	1/1:9,0:9:16.14:88,16,0	1/1:13,2:14:7.42:43,7,0	0/1:14,0:14:25.77:76,0,26	1/1:16,2:18:2.55:67,3,0	1/1:10,1:11:4.80:37,5,0	1/1:13,0:11:16.40:74,16,0	1/1:8,0:8:5.54:37,6,0	1/1:8,1:9:7.86:83,8,0	1/1:12,1:11:7.88:34,8,0	1/1:7,2:9:14.70:106,15,0	0/0:14,0:14:15.99:0,16,65	0/1:10,0:10:2.78:11,0,3	0/1:18,0:17:13.03:13,0,29	0/1:21,0:19:1.91:124,0,2	0/1:10,0:10:11.97:41,0,12	0/0:14,0:13:0.47:0,0,1	1/1:12,4:16:24.93:134,25,0	1/1:15,0:15:21.84:125,22,0	1/1:10,0:10:5.75:46,6,0	1/1:7,1:8:11.96:101,12,0	1/1:16,0:16:42.49:239,42,0	1/1:8,0:8:2.64:12,3,0	0/1:11,1:12:8.03:35,0,8
chr10	96466787	.	A	ACACT	8846	PASS	AB=0.552;AC=49;AF=0.907;AN=54;BaseQRankSum=-3.870;DP=422;FS=3.462;HRun=0;HaplotypeScore=73.9311;InbreedingCoeff=0.6292;MQ=64.63;MQ0=7;MQRankSum=-5.929;QD=25.20;ReadPosRankSum=2.326;VQSLOD=4.0657;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:32:36.66:58,0,37	1/1:6,0:5:12.01:164,12,0	0/0:35,0:14:31.79:0,32,454	0/0:16,0:10:26.05:0,26,312	1/1:6,14:22:8.82:107,9,0	1/1:6,0:9:18.06:314,18,0	1/1:1,0:11:9.03:144,9,0	1/1:4,1:13:30.10:587,30,0	1/1:7,10:22:21.07:373,21,0	1/1:8,6:16:27.02:445,27,0	1/1:2,8:12:18.06:356,18,0	1/1:7,1:13:14.87:251,15,0	1/1:9,1:12:24.07:440,24,0	1/1:3,7:11:6.49:138,6,0	1/1:4,0:12:17.89:297,18,0	1/1:6,5:12:11.91:194,12,0	1/1:7,0:8:12.03:201,12,0	1/1:12,0:12:23.79:391,24,0	1/1:9,13:23:60.20:1209,60,0	1/1:3,6:9:15.05:305,15,0	./.	1/1:3,0:16:27.09:470,27,0	1/1:7,3:15:33.02:532,33,0	1/1:3,8:11:9.03:175,9,0	1/1:7,0:8:12.04:184,12,0	1/1:15,0:18:51.14:911,51,0	1/1:3,0:10:12.04:225,12,0	1/1:4,3:11:18.06:375,18,0
chr10	96466789	.	A	AC	274.92	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=-0.773;DP=403;FS=2.246;HRun=1;HaplotypeScore=80.3988;InbreedingCoeff=0.6033;MQ=71.07;MQ0=6;MQRankSum=-2.277;QD=13.75;ReadPosRankSum=-0.054;VQSLOD=2.7593;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:5.21:0,5,29	0/0:6,0:5:14.79:0,15,135	0/0:33,1:16:18.09:0,18,384	0/0:18,0:12:10.12:0,10,243	0/0:22,0:22:8.65:0,9,66	0/0:8,0:8:15:0,15,101	0/0:13,0:12:11.60:0,12,71	0/0:13,0:13:22.61:0,23,118	0/0:20,0:20:20.29:0,20,150	0/0:14,0:14:7.24:0,7,166	0/0:10,0:10:11.02:0,11,65	0/0:14,0:14:16.75:0,17,113	0/0:10,0:10:21.10:0,21,143	0/0:14,0:12:10.79:0,11,108	0/0:15,0:15:3.39:0,3,87	0/0:8,0:8:5.57:0,6,60	1/1:1,6:8:11.99:134,12,0	1/1:2,9:11:24.06:255,24,0	0/0:24,0:24:44.87:0,45,243	0/0:6,0:6:8.70:0,9,54	./.	0/0:15,0:15:22.12:0,22,131	0/0:13,0:13:22.32:0,22,191	0/0:11,0:11:7.02:0,7,37	0/0:9,0:9:14.20:0,14,111	0/0:20,0:20:39.84:0,40,260	0/0:9,0:9:7.15:0,7,41	0/0:10,0:10:10.23:0,10,77
chr10	96466790	.	T	TCA	561.13	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=-2.906;DP=415;FS=2.217;HRun=0;HaplotypeScore=88.3102;InbreedingCoeff=0.8320;MQ=72.78;MQ0=5;MQRankSum=-4.362;QD=22.45;ReadPosRankSum=0.585;VQSLOD=4.0124;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:9:0,9,88	0/0:6,0:5:14.96:0,15,176	0/0:34,0:18:41.01:0,41,577	0/0:19,0:12:22.67:0,23,310	0/0:22,0:22:12.02:0,12,123	0/0:8,0:8:18.04:0,18,205	0/0:13,0:12:11.75:0,12,107	0/0:15,0:15:39:0,39,397	0/0:20,0:20:24.01:0,24,255	0/0:14,0:14:26.98:0,27,280	0/0:10,0:10:17.97:0,18,150	0/0:15,0:15:18.03:0,18,203	0/0:10,0:10:27.05:0,27,298	0/0:15,0:13:15.02:0,15,184	0/0:16,0:16:27.04:0,27,286	0/0:8,0:8:8.97:0,9,78	1/1:4,6:10:20.92:248,21,0	1/1:8,7:15:30.10:433,30,0	0/0:24,0:24:63.12:0,63,696	0/0:6,0:6:15.01:0,15,141	./.	0/0:16,0:16:27.01:0,27,257	0/0:12,0:13:32.91:0,33,300	0/0:11,0:11:9.01:0,9,102	0/0:9,0:9:15.05:0,15,204	0/0:21,0:21:51.09:0,51,564	0/0:10,0:10:11.95:0,12,125	0/0:9,0:9:21.01:0,21,218
chr10	96467452	.	AAAT	A	2287.53	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.715;DP=630;FS=0.540;HRun=0;HaplotypeScore=85.9691;InbreedingCoeff=0.9946;MQ=78.50;MQ0=0;MQRankSum=-2.892;QD=37.50;ReadPosRankSum=2.506;VQSLOD=4.4695;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.31:0,90,1948	0/0:15,0:15:42.14:0,42,911	0/0:18,0:18:51.11:0,51,993	0/0:12,0:12:17.35:0,17,334	0/0:22,0:22:66.20:0,66,1412	0/0:22,0:22:63.22:0,63,1376	0/0:19,0:19:42.13:0,42,884	0/0:23,0:23:63.22:0,63,1366	0/0:15,0:15:42.14:0,42,908	0/0:38,0:38:99:0,111,2379	0/0:20,0:20:51.18:0,51,1126	0/0:26,0:26:72.22:0,72,1489	0/0:25,0:25:72.23:0,72,1516	0/0:16,0:16:42.14:0,42,927	0/0:28,0:28:78.25:0,78,1665	0/0:16,0:16:48.16:0,48,1059	1/1:0,35:35:80.90:1301,81,0	1/1:0,26:26:69.24:1108,69,0	0/0:18,0:18:51.18:0,51,1126	0/0:27,0:27:81.28:0,81,1787	0/0:23,0:23:63.22:0,63,1352	0/0:28,0:28:81.26:0,81,1722	0/0:21,0:21:57.18:0,57,1216	0/0:16,0:16:48.16:0,48,1060	0/0:32,0:32:96.32:0,96,2063	0/0:23,0:23:69.23:0,69,1464	0/0:25,0:25:69.24:0,69,1507	0/0:10,0:10:27.09:0,27,596
chr10	96467829	.	T	TA	5590.78	PASS	AB=0.670;AC=30;AF=0.536;AN=56;BaseQRankSum=-9.792;DP=519;FS=4.657;HRun=11;HaplotypeScore=64.4000;InbreedingCoeff=0.5269;MQ=72.66;MQ0=0;MQRankSum=-1.385;QD=16.69;ReadPosRankSum=2.506;VQSLOD=5.9982;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:27:54.80:0,55,400	0/0:7,0:7:14.93:0,15,116	0/0:13,0:13:2.43:0,2,63	0/0:15,0:16:15.10:0,15,105	0/0:21,0:23:37.38:0,37,262	0/1:8,11:19:50.84:258,0,51	1/1:3,16:20:4.15:366,4,0	0/1:17,16:33:52.06:396,0,52	0/1:1,11:12:3.04:187,0,3	1/1:3,8:11:0.77:180,1,0	1/1:6,15:22:42.01:405,42,0	1/1:3,15:18:39.08:396,39,0	1/1:1,7:8:21.04:213,21,0	1/1:5,8:13:27.05:271,27,0	0/0:16,0:16:38.77:0,39,294	0/0:23,1:26:27.29:0,27,368	0/0:2,0:22:36.66:0,37,106	0/0:1,0:13:20.37:0,20,59	1/1:5,10:16:29.18:319,29,0	1/1:3,13:16:27.01:263,27,0	1/1:6,12:18:15.84:342,16,0	0/1:14,12:26:74.13:221,0,74	1/1:6,19:26:43.33:475,43,0	0/1:3,9:12:9.22:214,0,9	0/1:10,1:11:6.53:7,0,139	0/0:20,1:21:23.31:0,23,359	1/1:3,23:25:43.09:611,43,0	1/1:6,20:27:45.04:467,45,0
chr10	96468074	.	T	TC	345.14	PASS	AB=0.931;AC=8;AF=0.143;AN=56;BaseQRankSum=0.963;DP=488;FS=3.144;HRun=0;HaplotypeScore=91.6355;InbreedingCoeff=0.2322;MQ=68.27;MQ0=6;MQRankSum=1.806;QD=3.60;ReadPosRankSum=-0.119;VQSLOD=3.2453;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:65.15:0,65,600	0/1:2,0:2:0:0,0,0	0/0:28,0:12:17.64:0,18,119	0/0:19,0:13:1.86:0,2,40	0/0:13,0:13:14.49:0,14,85	0/0:32,0:31:73.77:0,74,798	0/0:17,0:17:42.25:0,42,415	0/1:15,0:14:68.04:95,0,68	0/0:16,0:16:34.61:0,35,393	0/0:14,0:14:35.90:0,36,348	0/0:8,0:8:12.33:0,12,79	0/0:19,0:19:39.32:0,39,354	0/0:19,0:19:50.76:0,51,476	0/0:22,0:22:56.69:0,57,478	0/0:19,0:19:14.71:0,15,123	0/0:21,0:21:53.99:0,54,585	0/0:29,0:29:77.64:0,78,883	0/0:20,0:20:48.66:0,49,467	0/1:13,1:14:46.30:111,0,46	1/1:7,0:7:9.92:48,10,0	0/1:16,1:17:17.45:29,0,17	0/0:15,0:15:38.86:0,39,385	0/0:7,0:7:14.95:0,15,142	0/0:14,0:14:32.94:0,33,378	0/0:11,0:11:17.13:0,17,120	0/0:21,0:21:23.67:0,24,243	0/1:24,5:28:48.80:139,0,49	0/1:10,2:12:3.83:53,0,4
chr10	96468075	.	T	TCC	1799.39	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-5.833;DP=476;FS=1.879;HRun=2;HaplotypeScore=99.3862;InbreedingCoeff=0.8397;MQ=67.89;MQ0=6;MQRankSum=1.634;QD=15.51;ReadPosRankSum=-0.279;VQSLOD=0.8380;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:57.11:0,57,721	0/0:2,0:2:3.01:0,3,34	0/0:26,0:11:2.79:0,3,88	0/1:19,0:13:3.15:3,0,73	0/0:11,0:11:17.84:0,18,185	0/0:32,0:31:69.11:0,69,922	0/0:17,0:17:39.05:0,39,452	1/1:5,10:15:30.04:399,30,0	0/0:16,0:16:42.12:0,42,549	0/0:13,0:13:33.11:0,33,449	0/0:8,0:8:15.05:0,15,178	0/0:18,0:18:36.05:0,36,428	0/0:18,0:18:39.09:0,39,491	0/0:22,0:22:39.11:0,39,511	0/0:18,0:18:21:0,21,250	0/0:21,0:21:51.13:0,51,665	0/0:27,0:27:69.22:0,69,965	0/0:21,0:21:45.10:0,45,579	1/1:10,3:13:30.05:395,30,0	1/1:2,5:8:12.04:185,12,0	1/1:4,13:18:9.01:114,9,0	0/0:13,0:13:36.07:0,36,467	0/0:7,0:7:15.03:0,15,182	0/0:14,0:14:27.07:0,27,368	0/0:11,0:11:26.90:0,27,275	0/0:19,0:19:38.05:0,38,390	1/1:12,16:27:42.10:583,42,0	1/1:2,9:13:21.07:300,21,0
chr10	96468107	.	CCTAGG	C	11046.19	PASS	AB=0.525;AC=25;AF=0.463;AN=54;BaseQRankSum=3.898;DP=438;FS=0.826;HRun=0;HaplotypeScore=87.8316;InbreedingCoeff=0.8884;MQ=49.25;MQ0=18;MQRankSum=-8.204;QD=50.90;ReadPosRankSum=2.119;VQSLOD=4.7918;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:3,29:31:26.01:1257,0,26	0/0:5,0:5:15.05:0,15,485	./.	0/0:8,0:3:0:0,0,0	0/0:4,0:4:12.04:0,12,364	1/1:3,22:23:59.97:1060,60,0	1/1:0,17:17:36.01:696,36,0	0/0:22,0:20:51.18:0,51,1630	1/1:1,19:20:57.20:1253,57,0	1/1:1,10:10:30.10:667,30,0	1/1:0,9:9:20.99:374,21,0	1/1:0,19:19:51.17:1108,51,0	1/1:0,16:16:48.12:1013,48,0	1/1:0,14:14:39.13:869,39,0	0/0:12,0:12:21.07:0,21,678	1/1:0,21:21:57.16:1224,57,0	0/0:35,0:35:99:0,102,3223	0/0:21,0:21:60.21:0,60,1872	0/0:15,0:13:39.13:0,39,1244	0/0:8,0:8:15.05:0,15,472	0/0:26,0:24:39.13:0,39,1227	1/1:0,9:9:23.91:391,24,0	1/1:0,8:8:24.08:534,24,0	1/1:1,15:16:27.09:601,27,0	0/0:13,0:12:36.12:0,36,1163	0/0:10,0:10:30.10:0,30,928	0/0:19,0:19:27.09:0,27,872	0/0:14,0:12:18.06:0,18,580
chr10	96468343	.	G	GCAGA	2365.32	PASS	AB=0.563;AC=7;AF=0.130;AN=54;BaseQRankSum=-8.958;DP=520;FS=12.940;HRun=0;HaplotypeScore=85.3224;InbreedingCoeff=0.7233;MQ=77.16;MQ0=0;MQRankSum=0.042;QD=45.49;ReadPosRankSum=1.168;VQSLOD=3.2660;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,129,2142	./.	0/0:24,0:23:50.25:0,50,865	0/0:19,0:20:48:0,48,652	1/1:1,7:9:17.99:401,18,0	0/0:15,0:15:36.11:0,36,617	0/0:20,0:20:48.12:0,48,801	0/0:23,0:23:66.15:0,66,1016	0/0:24,0:24:57.17:0,57,958	0/0:13,0:13:36.07:0,36,558	0/0:6,0:6:6.02:0,6,108	0/0:18,0:18:42.08:0,42,718	0/0:26,0:26:66.19:0,66,1125	0/0:19,0:19:51.17:0,51,889	1/1:1,18:21:42.14:1090,42,0	0/0:21,0:21:54.16:0,54,904	0/0:33,0:33:90.22:0,90,1452	0/0:20,0:20:51.13:0,51,882	0/0:25,0:25:62.58:0,63,1073	0/0:8,0:8:24.03:0,24,369	0/0:41,0:41:99:0,114,2003	0/0:6,0:6:15.02:0,15,211	0/0:4,0:4:12.03:0,12,187	0/0:32,0:32:87.08:0,87,1534	1/1:1,3:4:6.02:156,6,0	0/1:4,14:18:11.83:857,0,12	0/0:18,0:18:48.16:0,48,849	0/0:1,0:1:3.01:0,3,54
chr10	96468857	.	TAAAAC	T	764.24	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.972;DP=708;FS=13.665;HRun=0;HaplotypeScore=133.1273;InbreedingCoeff=0.9779;MQ=68.28;MQ0=2;MQRankSum=0.506;QD=21.84;ReadPosRankSum=1.702;VQSLOD=2.7600;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,105,2792	0/0:10,0:10:21.07:0,21,563	0/0:24,0:21:21.07:0,21,366	0/0:33,0:28:26.34:0,26,460	0/0:24,0:24:60.21:0,60,1596	0/0:28,0:28:72.24:0,72,1852	0/0:23,0:23:48.16:0,48,1321	0/0:29,0:29:48.16:0,48,1211	0/0:23,0:23:42.14:0,42,1097	0/0:20,0:20:54.19:0,54,1536	0/0:26,0:26:54.18:0,54,1438	0/0:33,0:33:69.22:0,69,1799	0/0:29,0:29:63.22:0,63,1780	0/0:20,0:20:45.15:0,45,1278	0/0:23,0:23:63.22:0,63,1792	0/0:30,0:30:66.19:0,66,1678	1/1:10,12:22:27.09:497,27,0	1/1:2,11:13:21.07:387,21,0	0/0:19,0:19:12.66:0,13,690	0/0:31,0:31:66.22:0,66,1782	0/0:33,0:33:66.23:0,66,1824	0/0:14,0:14:39.13:0,39,1045	0/0:27,0:27:66.23:0,66,1661	0/0:35,0:35:57.19:0,57,1625	0/0:26,0:26:60.21:0,60,1590	0/0:29,0:29:66.22:0,66,1775	0/0:24,0:23:63.21:0,63,1734	0/0:9,0:8:24.08:0,24,682
chr10	96471213	.	CAGT	C	2831.19	PASS	AB=0.786;AC=48;AF=0.923;AN=52;BaseQRankSum=-1.865;DP=331;FS=0.000;HRun=0;HaplotypeScore=62.2014;InbreedingCoeff=0.2257;MQ=67.09;MQ0=4;MQRankSum=2.136;QD=9.63;ReadPosRankSum=3.415;VQSLOD=2.6112;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,3:20:29.87:237,30,0	1/1:2,0:2:3:27,3,0	0/1:14,0:9:0.87:1,0,11	0/0:20,0:16:7.97:0,8,97	1/1:11,0:11:23.97:200,24,0	1/1:9,0:9:8.59:78,9,0	1/1:17,0:17:23.91:194,24,0	1/1:9,11:19:32.92:267,33,0	1/1:2,9:11:3:27,3,0	1/1:8,4:12:14.95:118,15,0	./.	1/1:7,0:7:6.01:58,6,0	1/1:4,0:4:3:25,3,0	1/1:11,0:11:3.01:31,3,0	1/1:3,7:10:3.01:42,3,0	0/1:3,9:12:18.36:89,0,18	1/1:16,0:16:5.97:63,6,0	1/1:19,0:19:38.73:313,39,0	1/1:10,3:12:9.01:85,9,0	1/1:6,0:6:13.41:92,13,0	1/1:28,0:27:20.08:322,20,0	./.	1/1:7,0:7:2.55:20,3,0	1/1:18,0:18:44.94:374,45,0	1/1:5,0:5:8.93:66,9,0	1/1:3,5:8:15:144,15,0	1/1:8,0:8:5.99:49,6,0	1/1:6,0:6:2.98:22,3,0
chr10	96471235	.	AGTAGTGGTG	A	2772.22	PASS	AB=1.000;AC=40;AF=0.741;AN=54;BaseQRankSum=-5.205;DP=268;FS=2.454;HRun=0;HaplotypeScore=78.1676;InbreedingCoeff=0.1025;MQ=55.80;MQ0=11;MQRankSum=1.335;QD=11.70;ReadPosRankSum=1.174;VQSLOD=1.8713;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:99:155,0,168	0/1:3,0:3:7.67:21,0,8	0/1:8,0:3:0.87:1,0,11	0/0:11,0:8:8.07:0,8,97	1/1:9,0:9:23.97:200,24,0	1/1:6,0:5:7.78:77,8,0	1/1:16,0:14:21.86:191,22,0	1/1:21,0:14:32.92:267,33,0	1/1:9,0:9:3:27,3,0	1/1:6,0:6:14.95:118,15,0	./.	0/1:7,0:7:11.61:90,0,12	0/1:2,0:2:1.83:20,0,2	1/1:2,0:10:2.98:23,3,0	0/0:7,0:7:3.01:0,3,54	0/1:14,0:13:84.53:85,0,199	1/1:0,18:18:5.99:183,6,0	1/1:18,0:18:45.23:408,45,0	1/1:11,0:8:12.16:97,12,0	1/1:5,0:5:13.41:92,13,0	1/1:20,0:19:20.82:323,21,0	0/0:5,0:5:3:0,3,29	1/1:0,0:6:2.36:19,2,0	1/1:17,0:17:40.69:332,41,0	0/1:3,0:3:35.82:36,0,58	0/1:6,0:5:38.93:87,0,39	1/1:2,0:2:5.99:49,6,0	1/1:2,0:2:3.45:23,3,0
chr10	96471935	.	G	GCATC	12215	PASS	AB=0.818;AC=38;AF=0.679;AN=56;BaseQRankSum=-11.466;DP=890;FS=1.681;HRun=0;HaplotypeScore=154.3943;InbreedingCoeff=0.6083;MQ=61.96;MQ0=20;MQRankSum=3.158;QD=18.31;ReadPosRankSum=-0.555;VQSLOD=4.5242;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:35:21.61:0,22,200	0/0:9,0:16:11.61:0,12,94	0/0:27,0:14:8.75:0,9,73	0/0:32,0:20:11.71:0,12,134	0/0:8,0:27:1.32:0,1,167	1/1:9,9:22:9.03:213,9,0	1/1:40,0:40:36.06:620,36,0	1/1:49,0:46:20.73:140,21,0	1/1:13,23:37:48.64:1122,49,0	1/1:14,20:39:75.61:1400,76,0	1/1:4,12:16:21.07:481,21,0	1/1:17,17:34:27.09:622,27,0	0/1:14,21:36:8.50:737,0,8	1/1:15,18:33:33.11:776,33,0	0/0:16,0:40:20.39:0,20,334	0/0:14,0:46:27.91:0,28,252	1/1:11,13:24:21.07:497,21,0	0/1:12,11:26:83.49:399,0,83	1/1:27,0:23:24.07:385,24,0	1/1:24,0:24:39.13:683,39,0	1/1:59,0:58:57.19:1040,57,0	1/1:12,24:36:26.58:578,27,0	1/1:9,12:23:26.91:584,27,0	1/1:12,25:38:30.10:711,30,0	0/1:8,0:22:14.98:15,0,190	0/1:16,0:33:73.39:73,0,241	1/1:34,0:34:41.69:790,42,0	1/1:13,0:13:18.06:347,18,0
chr10	96471939	.	C	CCATG	10926.55	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-2.044;DP=882;FS=9.194;HRun=0;HaplotypeScore=160.3018;InbreedingCoeff=-0.2255;MQ=60.56;MQ0=21;MQRankSum=-0.233;QD=15.28;ReadPosRankSum=7.011;VQSLOD=3.4842;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:64.83:0,65,507	0/0:16,0:16:29.96:0,30,268	0/1:23,0:11:42.30:92,0,42	0/0:30,0:18:20.95:0,21,437	0/1:27,0:27:41.05:41,0,373	0/1:25,0:25:99:99,0,214	0/1:37,0:37:99:234,0,470	1/1:46,0:43:99:899,110,0	0/1:35,0:35:98.28:635,0,98	0/1:41,0:40:99:640,0,245	0/1:17,0:17:41.85:291,0,42	0/1:35,0:35:99:318,0,290	0/1:34,0:34:99:480,0,200	0/1:32,0:32:99:453,0,156	0/0:39,0:39:9.34:0,9,586	0/0:46,0:46:65.95:0,66,617	0/1:24,0:24:99:272,0,147	0/1:24,0:24:99:225,0,280	1/1:9,19:24:27.16:789,27,0	1/1:3,20:24:50.94:1067,51,0	1/1:1,57:60:57.20:1504,57,0	0/1:35,0:35:99:305,0,160	0/1:23,0:23:99:313,0,158	0/1:42,0:42:99:388,0,259	0/1:21,0:21:49.89:50,0,315	0/1:33,0:32:99:217,0,518	1/1:2,31:34:41.51:1131,42,0	1/1:2,12:13:18.06:484,18,0
chr10	96472410	.	CTGTAGAA	C	811.40	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.461;DP=621;FS=32.627;HRun=0;HaplotypeScore=138.0216;InbreedingCoeff=0.9415;MQ=83.27;MQ0=0;MQRankSum=-5.725;QD=67.62;ReadPosRankSum=2.607;VQSLOD=1.7492;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:6.02:154,6,0	0/0:12,0:12:36.12:0,36,1345	0/0:22,0:22:60.20:0,60,2000	0/0:16,0:16:39.13:0,39,1320	0/0:27,0:27:78.25:0,78,2902	0/0:31,0:31:90.29:0,90,3420	0/0:20,0:20:57.18:0,57,2052	0/0:39,0:39:99:0,99,3782	0/0:24,0:24:72.23:0,72,2700	0/0:38,0:38:99:0,105,4159	0/0:30,0:30:90.31:0,90,3522	0/0:15,0:15:39.13:0,39,1547	0/0:22,0:22:60.21:0,60,2373	0/0:9,0:9:24.08:0,24,952	0/0:15,0:15:39.13:0,39,1472	1/1:0,10:10:30.10:769,30,0	0/0:23,0:23:69.22:0,69,2520	0/0:15,0:15:45.11:0,45,1680	0/0:26,0:26:78.27:0,78,2979	0/0:29,0:29:78.27:0,78,3067	0/0:30,0:30:81.28:0,81,3137	0/0:36,0:36:99:0,105,3877	0/0:30,0:30:78.27:0,78,3002	0/0:10,0:10:27.09:0,27,1053	0/0:31,0:31:87.30:0,87,3422	0/0:20,0:20:60.21:0,60,2381	0/0:22,0:22:60.21:0,60,2376	0/0:17,0:17:51.18:0,51,2023
chr10	96472534	.	G	GTACAC	11228.76	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.940;DP=658;FS=27.829;HRun=0;HaplotypeScore=115.4091;InbreedingCoeff=0.9982;MQ=83.25;MQ0=0;MQRankSum=-7.183;QD=70.18;ReadPosRankSum=-1.972;VQSLOD=3.3080;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.31:0,90,1850	0/0:11,0:11:30.10:0,30,609	0/0:18,0:18:42.14:0,42,799	0/0:26,0:26:35.57:0,36,1096	0/0:17,0:17:48.16:0,48,988	0/0:23,0:23:57.20:0,57,1181	0/0:28,0:28:69.24:0,69,1430	1/1:16,28:45:99:3048,114,0	0/0:29,0:29:84.29:0,84,1740	0/0:23,0:23:63.21:0,63,1260	0/0:20,0:20:51.15:0,51,969	0/0:34,0:34:99:0,99,2003	0/0:37,0:37:99:0,105,2126	0/0:18,0:18:48.16:0,48,969	0/0:22,0:22:66.23:0,66,1368	0/0:14,0:14:39.13:0,39,760	0/0:19,0:19:54.19:0,54,1113	0/0:19,0:19:48.16:0,48,987	1/1:7,7:16:42.11:1213,42,0	1/1:5,25:30:75.26:2298,75,0	1/1:7,23:31:60.21:1843,60,0	0/0:26,0:26:75.24:0,75,1489	0/0:17,0:17:51.18:0,51,1055	0/0:22,0:22:60.21:0,60,1243	0/0:20,0:20:51.18:0,51,1048	0/0:25,0:25:66.23:0,66,1359	1/1:4,21:28:75.26:2274,75,0	1/1:3,7:10:18.06:553,18,0
chr10	96474509	.	T	TA	589.51	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.227;DP=626;FS=0.000;HRun=10;HaplotypeScore=66.8424;InbreedingCoeff=0.9412;MQ=73.63;MQ0=0;MQRankSum=-0.541;QD=16.38;ReadPosRankSum=0.271;VQSLOD=3.8852;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,108,877	0/0:10,0:10:26.97:0,27,222	0/0:25,0:24:31.96:0,32,276	0/0:13,0:13:13.81:0,14,126	0/0:26,0:26:53.74:0,54,443	0/0:23,0:23:56.83:0,57,456	0/0:29,0:30:70.89:0,71,565	0/0:36,0:36:71.79:0,72,584	0/0:24,0:24:59.92:0,60,492	0/0:34,0:34:67.76:0,68,534	0/0:20,0:21:46.92:0,47,369	0/0:20,0:20:56.88:0,57,461	0/0:14,0:14:32.94:0,33,271	0/0:17,0:17:40.98:0,41,326	0/0:19,0:19:56.92:0,57,465	0/0:17,0:17:44.94:0,45,369	1/1:4,16:20:17.46:391,17,0	1/1:4,12:16:30.07:317,30,0	0/0:16,0:16:35.94:0,36,296	0/0:34,0:34:86.85:0,87,711	0/0:12,0:12:32.95:0,33,271	0/0:22,0:22:50.93:0,51,418	0/0:15,0:15:32.90:0,33,266	0/0:24,1:25:39.91:0,40,532	0/0:15,0:16:34.89:0,35,268	0/0:31,0:31:44.86:0,45,518	0/0:36,0:36:89.80:0,90,730	0/0:9,0:9:7.06:0,7,134
chr10	96474614	.	GCTTTT	G	5235.98	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.828;DP=584;FS=12.896;HRun=0;HaplotypeScore=110.3319;InbreedingCoeff=0.9973;MQ=84.94;MQ0=0;MQRankSum=-5.354;QD=44.00;ReadPosRankSum=0.440;VQSLOD=4.0173;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,4165	0/0:17,0:17:48.16:0,48,1343	0/0:15,0:14:36.09:0,36,823	0/0:27,0:28:45.47:0,45,1605	0/0:22,0:22:60.20:0,60,1677	0/0:22,0:22:63.19:0,63,1788	0/0:21,0:21:60.18:0,60,1724	1/1:2,21:22:60.11:1162,60,0	0/0:22,0:22:60.19:0,60,1749	0/0:26,0:26:78.26:0,78,2267	0/0:15,0:15:45.15:0,45,1395	0/0:24,0:24:72.22:0,72,2085	0/0:26,0:26:78.27:0,78,2404	0/0:13,0:13:39.11:0,39,1060	0/0:20,0:20:54.17:0,54,1555	0/0:9,0:9:27.08:0,27,771	0/0:25,0:25:75.23:0,75,2173	0/0:8,0:8:24.07:0,24,667	1/1:1,14:15:42.09:703,42,0	1/1:2,24:26:60.13:1106,60,0	1/1:3,11:14:24.08:504,24,0	0/0:23,0:23:66.17:0,66,1749	0/0:18,0:18:54.16:0,54,1539	0/0:20,0:20:60.21:0,60,1825	0/0:17,0:17:45.15:0,45,1276	0/0:28,0:28:84.28:0,84,2521	1/1:5,25:30:66.23:1384,66,0	1/1:0,11:11:18.06:378,18,0
chr10	96475041	.	A	AGAG	32098.77	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.927;DP=720;FS=0.000;HRun=0;HaplotypeScore=83.2358;InbreedingCoeff=0.9605;MQ=68.05;MQ0=0;MQRankSum=-6.067;QD=47.41;ReadPosRankSum=6.136;VQSLOD=6.3895;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,42:50:93.32:2060,93,0	1/1:2,10:12:24.01:486,24,0	0/0:25,0:24:54.11:0,54,735	0/0:18,0:17:8.02:0,8,335	1/1:1,16:17:39.09:822,39,0	1/1:1,18:19:39.13:870,39,0	1/1:4,23:29:57.20:1271,57,0	1/1:3,21:24:63.17:1157,63,0	1/1:2,25:27:57.20:1270,57,0	1/1:3,29:33:93.32:2007,93,0	1/1:2,20:22:48.08:1020,48,0	1/1:3,29:32:75.26:1672,75,0	1/1:3,23:26:47.88:1055,48,0	1/1:2,31:33:75.26:1668,75,0	1/1:0,29:30:66.23:1472,66,0	1/1:3,17:20:42.14:934,42,0	1/1:4,25:29:60.21:1338,60,0	1/1:3,16:19:30.10:669,30,0	1/1:5,18:27:66.10:1174,66,0	1/1:2,18:20:48.12:953,48,0	1/1:2,38:40:75.19:1589,75,0	1/1:2,20:23:51.18:1135,51,0	1/1:0,20:20:51.13:1081,51,0	1/1:3,36:39:90.31:1996,90,0	1/1:1,16:17:39.13:870,39,0	1/1:5,29:37:93.29:1990,93,0	1/1:4,14:18:33.11:735,33,0	1/1:0,14:14:36.12:803,36,0
chr10	96475353	.	GCC	G	3227.04	PASS	AB=0.619;AC=23;AF=0.411;AN=56;BaseQRankSum=-0.444;DP=379;FS=1.096;HRun=11;HaplotypeScore=58.5817;InbreedingCoeff=0.6628;MQ=77.25;MQ0=2;MQRankSum=1.086;QD=14.47;ReadPosRankSum=5.913;VQSLOD=1.5284;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:15.04:0,15,199	0/0:2,0:6:2.75:0,3,38	0/0:9,0:9:11.37:0,11,88	0/0:17,0:15:11.07:0,11,120	0/0:3,0:3:3:0,3,28	1/1:1,10:10:21.05:223,21,0	1/1:7,11:18:27.04:287,27,0	0/0:14,0:14:9.02:0,9,110	1/1:1,17:18:42.10:447,42,0	1/1:5,8:13:24.01:255,24,0	0/1:3,4:7:14.97:55,0,15	1/1:5,12:18:35.78:363,36,0	1/1:4,11:15:27.04:287,27,0	1/1:6,18:27:20.84:334,21,0	0/0:6,0:10:9.49:0,9,104	0/0:8,0:8:15.01:0,15,202	0/1:6,2:24:18.89:19,0,133	0/1:6,1:13:11.92:12,0,102	0/0:12,0:13:23.44:0,23,251	0/0:6,0:6:9:0,9,96	0/0:19,0:22:24.19:0,24,298	1/1:4,12:17:26.78:267,27,0	1/1:6,10:17:14.79:214,15,0	1/1:1,24:24:63.16:670,63,0	0/0:14,0:15:14.98:0,15,143	0/0:4,0:4:6.01:0,6,74	0/0:10,0:10:15.04:0,15,199	0/0:2,0:3:5.48:0,5,32
chr10	96476946	.	C	CA	5715	PASS	AB=0.727;AC=22;AF=0.393;AN=56;BaseQRankSum=-11.189;DP=606;FS=1.973;HRun=9;HaplotypeScore=58.4994;InbreedingCoeff=0.8918;MQ=62.52;MQ0=11;MQRankSum=2.595;QD=22.77;ReadPosRankSum=2.364;VQSLOD=5.7860;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:47.96:0,48,412	0/0:7,0:7:14.99:0,15,130	0/0:30,0:11:20.65:0,21,178	0/0:23,0:12:11.44:0,11,145	0/0:25,0:26:20.32:0,20,390	1/1:2,26:28:66.18:730,66,0	1/1:6,19:25:31.10:571,31,0	0/0:28,0:28:65.95:0,66,570	1/1:2,19:21:31.10:571,31,0	1/1:4,22:25:45.98:718,46,0	1/1:3,11:14:27.07:299,27,0	1/1:2,17:20:44.95:476,45,0	0/1:1,9:10:1.98:208,0,2	1/1:1,15:16:36.10:398,36,0	0/0:23,0:23:53.96:0,54,468	0/0:22,0:22:59.95:0,60,511	0/0:29,0:29:83.96:0,84,724	0/0:23,0:23:65.98:0,66,573	0/0:29,0:21:49.78:0,50,408	0/0:20,0:20:29.30:0,29,418	0/0:27,0:27:74.97:0,75,647	1/1:1,12:13:36.10:398,36,0	1/1:2,18:21:53.98:578,54,0	1/1:4,26:30:69.19:763,69,0	0/0:14,0:14:38.73:0,39,324	0/1:24,2:26:3.40:3,0,428	0/0:29,0:28:71.96:0,72,625	0/0:5,0:5:15:0,15,130
chr10	96477117	.	T	TA	3872.90	PASS	AB=0.749;AC=47;AF=0.839;AN=56;BaseQRankSum=-1.393;DP=546;FS=1.657;HRun=14;HaplotypeScore=77.0501;InbreedingCoeff=-0.1657;MQ=59.60;MQ0=16;MQRankSum=1.164;QD=7.09;ReadPosRankSum=0.019;VQSLOD=2.7583;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,18:24:4.68:158,5,0	1/1:0,0:5:11.49:62,11,0	0/1:34,0:10:6.37:6,0,19	0/1:24,0:9:12.24:21,0,12	1/1:2,0:9:8.02:41,8,0	0/1:8,15:23:14.27:134,0,14	1/1:13,16:26:9.28:196,9,0	1/1:17,19:36:35.70:407,36,0	1/1:6,9:15:15:132,15,0	0/1:7,4:13:1.57:90,0,2	1/1:6,4:10:14.31:151,14,0	0/1:4,12:17:4.39:79,0,4	1/1:3,4:6:3:26,3,0	0/1:15,5:20:18.48:213,0,18	1/1:4,2:22:18.88:107,19,0	1/1:6,8:14:1.27:115,1,0	0/1:14,2:30:12.24:153,0,12	1/1:17,1:20:21:192,21,0	0/1:16,5:18:2.30:78,0,2	1/1:9,12:21:38.05:297,38,0	1/1:6,10:17:13.31:118,13,0	1/1:6,6:12:3:141,3,0	1/1:8,3:11:16.72:138,17,0	1/1:4,15:19:18.88:161,19,0	1/1:6,0:13:11.52:69,12,0	1/1:12,0:29:45.49:228,45,0	0/1:8,8:14:4.05:233,0,4	1/1:7,13:21:4.25:128,4,0
chr10	96477283	.	T	TA	862.89	PASS	AB=0.879;AC=16;AF=0.286;AN=56;BaseQRankSum=-1.753;DP=421;FS=16.142;HRun=13;HaplotypeScore=51.0634;InbreedingCoeff=0.2419;MQ=75.12;MQ0=7;MQRankSum=-1.170;QD=4.61;ReadPosRankSum=0.416;VQSLOD=0.3223;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,1:22:0.90:0,1,143	1/1:2,5:7:9.01:84,9,0	0/1:24,0:17:14.15:20,0,14	0/0:14,0:8:4.63:0,5,24	0/1:7,11:18:28.87:176,0,29	0/1:13,1:15:4.44:4,0,89	0/1:10,0:10:5.24:5,0,85	0/1:26,3:32:43.96:44,0,94	0/1:12,1:14:1.95:2,0,119	0/0:17,0:17:29.66:0,30,205	0/0:10,0:10:20.72:0,21,140	0/0:13,0:12:17.76:0,18,123	0/1:4,1:5:18.94:19,0,32	0/0:10,0:10:17.76:0,18,123	1/1:6,12:17:18.02:167,18,0	0/0:12,0:12:22.85:0,23,150	0/0:15,1:16:4:0,4,126	0/0:27,0:29:60.54:0,61,399	0/0:21,0:23:40.60:0,41,272	0/1:6,2:8:34.86:35,0,82	0/0:16,0:16:20.64:0,21,143	0/0:4,0:4:5.89:0,6,40	0/0:8,0:8:14.83:0,15,103	0/0:9,0:9:17.74:0,18,121	1/1:4,8:12:6.40:194,6,0	1/1:8,14:22:30.03:279,30,0	0/0:12,0:12:20.66:0,21,136	0/0:16,0:16:13.17:0,13,204
chr10	96477480	.	C	CT	4409.42	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-1.647;DP=375;FS=41.320;HRun=2;HaplotypeScore=51.4037;InbreedingCoeff=0.7631;MQ=56.60;MQ0=5;MQRankSum=-2.059;QD=14.13;ReadPosRankSum=0.471;VQSLOD=1.8843;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:28:48.93:222,49,0	1/1:1,5:6:11.07:125,11,0	0/0:7,0:6:4.32:0,4,61	0/0:3,0:2:2.98:0,3,21	1/1:11,9:19:46.59:440,47,0	1/1:22,0:22:19.73:96,20,0	1/1:10,1:11:29.31:195,29,0	1/1:16,2:16:38.85:347,39,0	1/1:13,0:13:15.58:81,16,0	1/1:18,0:18:48.16:331,48,0	1/1:13,0:13:30.01:166,30,0	1/1:4,1:5:9.48:88,9,0	1/1:7,0:7:12.78:56,13,0	1/1:14,0:14:21.82:151,22,0	1/1:0,12:12:18.01:215,18,0	1/1:6,1:7:16.51:112,17,0	0/0:31,0:31:62.78:0,63,550	0/0:22,0:22:55.86:0,56,495	1/1:4,14:17:47.78:411,48,0	1/1:7,1:8:17.26:179,17,0	1/1:3,0:2:3.01:35,3,0	1/1:6,1:7:14:95,14,0	1/1:13,0:12:20.89:120,21,0	1/1:5,0:4:6.24:21,6,0	1/1:1,14:15:23.94:266,24,0	1/1:12,8:18:52.87:463,53,0	1/1:12,0:12:9.02:99,9,0	1/1:3,13:15:9.90:97,10,0
chr10	96477482	.	T	TTA	3832.64	PASS	AB=0.833;AC=46;AF=0.821;AN=56;BaseQRankSum=-1.403;DP=412;FS=87.365;HRun=0;HaplotypeScore=69.5039;InbreedingCoeff=0.4692;MQ=57.26;MQ0=5;MQRankSum=-3.191;QD=11.47;ReadPosRankSum=2.106;VQSLOD=0.0653;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:29:19.80:145,20,0	1/1:6,0:6:1.15:58,1,0	0/0:13,0:8:0.09:0,0,71	0/0:4,0:2:2.96:0,3,21	1/1:20,0:21:31.76:306,32,0	0/1:22,0:23:6.22:28,0,6	1/1:7,0:11:22.88:138,23,0	1/1:15,2:16:41.83:395,42,0	1/1:13,0:13:11.34:70,11,0	1/1:18,0:18:32.02:283,32,0	1/1:13,0:15:18.03:123,18,0	1/1:6,0:6:3.28:60,3,0	1/1:6,0:7:1.17:24,1,0	1/1:13,0:13:9.37:122,9,0	1/1:14,0:14:5.37:134,5,0	1/1:7,0:7:13.43:100,13,0	0/0:29,0:34:49.09:0,49,655	0/0:25,0:27:65.12:0,65,652	1/1:19,2:20:53.57:495,54,0	1/1:1,7:10:18.04:251,18,0	0/1:2,1:3:7.05:74,0,7	1/1:7,0:7:10.97:62,11,0	1/1:11,0:11:9.54:79,10,0	1/1:5,0:4:0.95:4,1,0	1/1:17,1:18:10.30:199,10,0	1/1:25,0:24:49.86:350,50,0	1/1:1,10:14:12.04:208,12,0	1/1:15,1:15:11.97:125,12,0
chr10	96478984	.	AAC	A	3832.12	PASS	AB=0.938;AC=13;AF=0.232;AN=56;BaseQRankSum=4.257;DP=795;FS=4.688;HRun=0;HaplotypeScore=124.8538;InbreedingCoeff=0.8628;MQ=65.70;MQ0=9;MQRankSum=2.440;QD=20.28;ReadPosRankSum=0.570;VQSLOD=3.4814;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:36:44.58:0,45,731	0/0:9,0:9:21.07:0,21,333	0/0:53,1:28:4.80:0,5,386	0/0:34,0:29:31.72:0,32,378	0/0:24,2:26:14.16:0,14,902	0/0:35,0:35:66.16:0,66,1004	0/0:26,0:26:45.05:0,45,569	1/1:7,25:32:72.65:854,73,0	0/0:33,0:33:65.92:0,66,928	0/0:28,0:28:66.21:0,66,1033	0/0:20,0:20:29.34:0,29,546	0/0:27,1:28:19.98:0,20,805	0/0:26,0:26:60.20:0,60,955	0/0:25,0:25:39.13:0,39,618	0/0:31,0:31:73.50:0,74,1217	0/0:37,0:37:54.06:0,54,761	0/0:22,0:22:48.10:0,48,704	0/0:17,0:17:48.16:0,48,769	1/1:7,16:22:51.05:600,51,0	1/1:7,20:28:56.15:534,56,0	1/1:8,40:48:84.26:1041,84,0	0/0:44,1:45:47:0,47,1210	0/0:22,0:22:10.38:0,10,650	0/1:28,2:30:60.28:60,0,603	0/0:21,0:21:48.16:0,48,778	0/0:30,0:30:35.05:0,35,1082	1/1:2,18:20:39.02:482,39,0	1/1:1,7:8:21.07:260,21,0
chr10	96479013	.	C	CACAT	11739.06	PASS	AB=0.582;AC=24;AF=0.429;AN=56;BaseQRankSum=-13.416;DP=797;FS=3.150;HRun=0;HaplotypeScore=147.5924;InbreedingCoeff=0.8602;MQ=59.14;MQ0=10;MQRankSum=2.702;QD=30.02;ReadPosRankSum=3.912;VQSLOD=4.7581;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,22:31:21.01:638,21,0	0/0:8,0:8:18.03:0,18,249	0/0:46,0:28:39.05:0,39,448	0/0:27,0:17:20.07:0,20,247	0/0:28,0:28:65.94:0,66,1049	1/1:12,26:38:48.16:1170,48,0	1/1:7,10:18:15.02:370,15,0	0/0:40,0:40:65.54:0,66,847	1/1:13,23:36:36.12:879,36,0	1/1:2,26:33:86.45:1736,86,0	1/1:7,14:21:29.86:658,30,0	0/1:12,21:35:7.91:919,0,8	1/1:8,22:30:45.05:1108,45,0	1/1:8,22:30:31.66:744,32,0	0/0:30,0:30:75.18:0,75,1111	0/1:6,21:28:19.85:637,0,20	0/0:27,0:27:63.55:0,64,960	0/0:18,0:18:43.39:0,43,684	0/0:20,0:19:42.08:0,42,616	0/0:24,0:24:39.13:0,39,644	0/0:44,0:43:78.07:0,78,1029	1/1:12,27:40:55.07:1272,55,0	1/1:7,17:25:27.56:666,28,0	1/1:7,17:25:40.95:941,41,0	0/0:21,0:21:51.13:0,51,772	0/0:30,0:30:66.21:0,66,1050	0/0:31,0:31:63.05:0,63,970	0/0:12,0:12:27.06:0,27,420
chr10	96479665	.	TGTGTG	T	1127.56	PASS	AB=0.820;AC=16;AF=0.286;AN=56;BaseQRankSum=11.360;DP=436;FS=41.906;HRun=0;HaplotypeScore=132.7559;InbreedingCoeff=-0.3666;MQ=60.13;MQ0=10;MQRankSum=-8.316;QD=5.22;ReadPosRankSum=2.298;VQSLOD=0.8162;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:24.88:0,25,390	0/1:4,6:10:6.13:198,0,6	0/0:20,0:13:28.55:0,29,350	0/0:19,0:11:33.08:0,33,396	0/1:11,4:15:59.19:151,0,59	0/1:12,1:13:66.84:67,0,101	0/1:12,3:15:85.19:102,0,85	0/0:13,0:13:37.81:0,38,225	0/1:11,1:11:15.27:15,0,83	0/0:15,0:15:36.69:0,37,260	0/0:12,0:13:26.58:0,27,176	0/1:8,1:9:19.08:19,0,73	0/1:7,3:10:91.07:91,0,115	0/1:11,2:13:23.06:69,0,23	0/1:11,2:13:36.47:84,0,36	0/0:17,0:17:35.52:0,36,769	0/0:32,0:33:16.99:0,17,318	0/0:14,0:13:24.12:0,24,181	0/0:11,0:11:26.23:0,26,161	0/1:15,0:19:55.47:55,0,156	0/0:23,0:21:40.48:0,40,372	0/1:10,1:11:8.51:9,0,94	0/1:17,1:20:22.34:22,0,179	0/1:13,0:17:75.86:76,0,121	0/0:9,1:10:20.18:0,20,117	0/1:10,3:12:91.28:122,0,91	0/1:10,0:19:98.77:187,0,99	0/1:3,0:4:17.72:18,0,26
chr10	96479764	.	CTT	C	1882.24	PASS	AB=0.799;AC=24;AF=0.429;AN=56;BaseQRankSum=-3.381;DP=465;FS=9.344;HRun=17;HaplotypeScore=80.0393;InbreedingCoeff=0.6268;MQ=72.76;MQ0=9;MQRankSum=4.816;QD=8.67;ReadPosRankSum=5.462;VQSLOD=0.6008;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:24:50.04:0,50,460	0/0:5,0:6:3:0,3,29	0/0:30,0:18:8.85:0,9,39	0/0:24,0:15:8.67:0,9,43	0/0:21,0:23:33.23:0,33,286	0/1:9,8:17:6.45:172,0,6	1/1:2,13:15:23.61:189,24,0	0/0:17,0:20:38.80:0,39,347	1/1:9,8:16:0.90:84,1,0	1/1:8,11:21:33.51:278,34,0	1/1:5,5:12:5.35:127,5,0	1/1:7,4:12:2.52:42,3,0	1/1:5,8:12:29.19:207,29,0	0/1:9,1:11:22.35:51,0,22	0/0:19,0:21:26.01:0,26,232	0/0:12,0:13:3.86:0,4,232	1/1:8,6:16:18.97:123,19,0	1/1:4,7:10:11.70:86,12,0	0/1:15,0:15:0.07:0,0,100	0/0:7,0:14:29.15:0,29,236	0/0:4,0:7:8.71:0,9,68	1/1:4,10:14:23.72:190,24,0	0/1:8,6:15:0.07:141,0,0	1/1:13,12:25:50.04:387,50,0	0/0:4,0:14:18:0,18,178	0/0:18,0:25:53.09:0,53,433	0/0:15,1:16:9.29:0,9,287	0/0:4,0:5:9.91:0,10,102
chr10	96481203	.	G	GC	3018.16	PASS	AB=0.568;AC=20;AF=0.357;AN=56;BaseQRankSum=-0.697;DP=387;FS=1.782;HRun=4;HaplotypeScore=89.0766;InbreedingCoeff=0.8398;MQ=50.44;MQ0=4;MQRankSum=3.230;QD=22.36;ReadPosRankSum=1.288;VQSLOD=2.7001;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:18.04:0,18,204	0/0:10,0:10:18.05:0,18,206	0/0:22,0:10:23.35:0,23,230	0/0:24,0:16:34.89:0,35,386	0/0:21,0:20:30.04:0,30,326	1/1:1,15:16:36.03:450,36,0	1/1:3,14:15:36.06:453,36,0	0/0:13,0:12:30.04:0,30,313	1/1:2,8:10:15.01:184,15,0	0/1:2,10:12:3.93:337,0,4	0/1:4,9:13:15.95:183,0,16	1/1:2,10:12:18.06:246,18,0	1/1:0,8:8:18.53:247,19,0	1/1:1,12:13:30.06:388,30,0	0/0:10,0:10:15.04:0,15,170	0/0:13,0:13:27.07:0,27,305	0/0:16,0:16:15:0,15,152	0/0:7,0:7:15.04:0,15,167	0/0:18,0:18:36.23:0,36,543	0/0:5,0:5:15.03:0,15,161	0/0:13,0:13:11.74:0,12,134	1/1:1,8:8:18.06:236,18,0	1/1:4,9:13:27.06:345,27,0	1/1:3,9:12:14.95:163,15,0	0/0:14,0:13:12.03:0,12,136	0/0:23,0:22:39.32:0,39,671	0/0:12,0:12:29.87:0,30,308	0/0:13,0:13:36.06:0,36,382
chr10	96481208	.	T	TACACAC	5793.85	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-0.871;DP=417;FS=5.562;HRun=0;HaplotypeScore=130.1517;InbreedingCoeff=0.2178;MQ=47.34;MQ0=7;MQRankSum=0.128;QD=14.56;ReadPosRankSum=1.733;VQSLOD=3.6735;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,3:21:11.95:239,12,0	1/1:8,2:10:12.04:288,12,0	0/0:19,0:8:8.73:0,9,74	0/1:25,0:16:3.82:4,0,190	1/1:18,2:19:6:91,6,0	1/1:16,0:15:17.81:129,18,0	1/1:14,0:12:18.83:166,19,0	1/1:18,0:16:27.09:483,27,0	1/1:10,0:9:10.94:73,11,0	1/1:12,0:12:11.62:120,12,0	0/1:15,0:15:9.59:54,0,10	0/1:11,0:11:12.84:73,0,13	1/1:10,0:10:11.63:81,12,0	1/1:15,0:16:14.97:159,15,0	1/1:7,1:8:3.01:63,3,0	1/1:13,2:15:18.06:420,18,0	1/1:7,0:18:5.96:116,6,0	1/1:9,0:10:17.80:334,18,0	1/1:17,2:20:30.05:677,30,0	1/1:8,0:8:9.03:180,9,0	1/1:14,0:14:3.48:75,3,0	1/1:10,0:9:8.97:71,9,0	1/1:12,0:12:11.97:98,12,0	1/1:13,0:13:6.19:43,6,0	1/1:10,4:13:3.01:73,3,0	1/1:21,3:23:36.11:902,36,0	1/1:16,0:18:20.99:453,21,0	1/1:13,0:14:15.05:327,15,0
chr10	96481259	.	AGGGGGGGGGG	A	3729.93	PASS	AB=0.841;AC=32;AF=0.593;AN=54;BaseQRankSum=-2.043;DP=377;FS=4.454;HRun=14;HaplotypeScore=106.4009;InbreedingCoeff=0.1993;MQ=34.12;MQ0=33;MQRankSum=1.286;QD=14.08;ReadPosRankSum=2.684;VQSLOD=-0.1266;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,1:26:37.09:291,0,37	0/1:6,0:6:41.17:81,0,41	0/0:16,0:5:12.04:0,12,384	0/0:28,0:6:17.89:0,18,369	1/1:12,8:19:6.01:123,6,0	1/1:15,5:18:8.96:260,9,0	./.	1/1:14,11:19:6.02:98,6,0	0/0:11,4:13:1.78:0,2,43	1/1:6,2:8:8.96:250,9,0	1/1:11,4:13:3.01:87,3,0	1/1:8,4:10:5.99:77,6,0	0/1:8,0:6:39.09:165,0,39	1/1:10,4:12:5.92:173,6,0	1/1:8,1:7:5.98:174,6,0	1/1:3,2:6:6.01:134,6,0	0/0:10,0:7:10.59:0,11,260	0/0:10,0:7:6.49:0,6,163	1/1:15,5:16:26.88:597,27,0	1/1:8,2:10:2.72:160,3,0	0/0:9,1:8:0:0,0,0	0/0:7,1:6:0:0,0,0	0/0:4,7:10:2.04:0,2,6	1/1:13,2:12:0.18:83,0,0	0/1:6,5:9:9.85:70,0,10	0/1:7,8:14:4.18:586,0,4	0/1:10,3:13:82.46:236,0,82	1/1:7,3:7:2.80:85,3,0
chr10	96482502	.	TTATTAC	T	5773.45	PASS	AB=0.533;AC=9;AF=0.161;AN=56;BaseQRankSum=13.339;DP=660;FS=4.418;HRun=0;HaplotypeScore=139.8238;InbreedingCoeff=0.8673;MQ=80.23;MQ0=0;MQRankSum=-12.725;QD=48.11;ReadPosRankSum=0.605;VQSLOD=4.5762;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.28:0,93,3047	1/1:1,13:14:30.10:679,30,0	0/0:22,0:22:60.20:0,60,1880	0/0:14,0:14:32.14:0,32,838	1/1:0,21:21:51.01:963,51,0	0/0:16,0:16:39.13:0,39,1351	0/0:16,0:16:48.16:0,48,1663	0/0:39,0:39:99:0,105,3532	0/0:22,0:22:63.22:0,63,2181	0/0:32,0:32:90.30:0,90,3009	0/0:27,0:27:69.24:0,69,2349	0/0:22,0:22:66.23:0,66,2286	0/0:21,0:21:57.20:0,57,1875	0/0:21,0:21:57.20:0,57,1964	1/1:3,27:30:63.22:1425,63,0	0/0:34,0:34:99:0,99,3365	0/0:29,0:29:75.26:0,75,2373	0/0:22,0:22:66.23:0,66,2268	0/0:14,0:14:36.12:0,36,1231	0/0:23,0:23:60.21:0,60,2041	0/0:13,0:13:36.12:0,36,1131	0/0:25,0:25:72.25:0,72,2494	0/0:24,0:24:63.22:0,63,2163	0/0:20,0:20:54.19:0,54,1870	1/1:6,17:23:42.14:950,42,0	0/1:4,28:32:81.64:1757,0,82	0/0:36,0:35:99:0,102,3449	0/0:14,0:14:39.11:0,39,1230
chr10	96484427	.	C	CAA	5778.92	PASS	AB=0.813;AC=54;AF=0.964;AN=56;BaseQRankSum=-2.951;DP=126;FS=27.520;HRun=0;HaplotypeScore=14.3928;InbreedingCoeff=-0.0962;MQ=66.78;MQ0=0;MQRankSum=-2.951;QD=45.86;ReadPosRankSum=2.711;VQSLOD=3.0924;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:4:12.04:243,12,0	1/1:0,3:3:9.03:181,9,0	0/1:2,1:3:24.41:54,0,24	0/1:6,1:5:4.02:55,0,4	1/1:0,6:6:18.02:317,18,0	1/1:0,2:3:6.02:121,6,0	1/1:0,4:5:6.02:122,6,0	1/1:0,3:3:9.02:147,9,0	1/1:0,4:4:9.03:182,9,0	1/1:0,8:8:24.08:487,24,0	1/1:0,10:10:30.10:599,30,0	1/1:0,2:2:3.01:61,3,0	1/1:0,2:2:6.02:121,6,0	1/1:0,5:5:15.05:303,15,0	1/1:0,2:2:6.02:121,6,0	1/1:0,1:1:3.01:61,3,0	1/1:0,3:4:9.03:171,9,0	1/1:0,6:6:12.04:241,12,0	1/1:0,8:4:12.04:243,12,0	1/1:0,6:6:18.06:365,18,0	1/1:0,5:5:8.99:142,9,0	1/1:0,1:1:3.01:61,3,0	1/1:0,6:6:18.06:347,18,0	1/1:0,5:5:6.02:122,6,0	1/1:0,2:2:6.02:121,6,0	1/1:0,6:6:18.06:365,18,0	1/1:0,4:4:9.03:182,9,0	1/1:0,4:4:12.04:243,12,0
chr10	96484495	.	C	CTCT	3517.81	PASS	AB=1.000;AC=51;AF=0.981;AN=52;DP=144;FS=0.000;HRun=0;HaplotypeScore=169.1509;InbreedingCoeff=0.1714;MQ=35.50;MQ0=0;QD=24.43;VQSLOD=3.6135;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,2:4:8.99:74,9,0	1/1:1,2:3:6.01:58,6,0	./.	0/1:3,0:2:0:0,0,0	1/1:1,7:8:17.93:137,18,0	1/1:1,8:9:26.99:235,27,0	1/1:3,6:9:27.01:271,27,0	1/1:3,5:5:15.04:164,15,0	1/1:2,5:7:20.98:207,21,0	1/1:3,2:5:9.02:91,9,0	1/1:0,4:4:11.95:91,12,0	1/1:2,2:4:12:149,12,0	1/1:4,8:12:35.94:376,36,0	1/1:2,3:5:14.93:114,15,0	1/1:3,2:5:12.01:113,12,0	1/1:1,6:7:21.01:223,21,0	1/1:2,4:6:18.01:167,18,0	1/1:0,1:1:3:28,3,0	1/1:2,1:3:9.01:124,9,0	1/1:4,2:6:14.99:190,15,0	1/1:3,2:5:12:103,12,0	1/1:1,6:7:20.98:212,21,0	1/1:1,2:3:5.96:45,6,0	1/1:1,1:2:2.98:22,3,0	1/1:3,0:3:6:51,6,0	1/1:5,3:8:15.03:158,15,0	1/1:3,4:7:14.95:116,15,0	./.
chr10	96484868	.	A	AC	452.92	PASS	AB=0.944;AC=16;AF=0.308;AN=52;BaseQRankSum=-2.598;DP=432;FS=0.000;HRun=0;HaplotypeScore=108.4791;InbreedingCoeff=-0.1187;MQ=26.32;MQ0=51;MQRankSum=0.143;QD=2.50;ReadPosRankSum=1.295;VQSLOD=2.3723;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:22:39.80:40,0,106	./.	0/0:62,0:9:11.86:0,12,80	0/0:69,0:6:8.92:0,9,68	0/0:13,0:11:11.85:0,12,89	0/1:15,1:14:57.71:58,0,68	0/1:13,1:13:4.36:89,0,4	0/0:18,0:18:21.39:0,21,120	0/1:13,0:13:32.02:32,0,43	0/1:18,3:18:38.74:121,0,39	1/1:6,1:6:3.52:15,4,0	0/1:7,0:7:3.31:3,0,34	0/1:5,0:4:5.23:5,0,23	0/1:15,0:13:28.29:28,0,51	0/1:17,0:15:29.69:30,0,100	0/1:10,1:9:21.31:21,0,50	0/0:15,0:14:14.88:0,15,150	0/0:8,0:8:18.55:0,19,118	0/0:19,0:16:32.31:0,32,156	0/0:3,0:1:1.82:0,2,5	0/0:14,0:11:9.32:0,9,63	./.	0/1:3,3:5:8.78:78,0,9	1/1:12,1:9:4.55:30,5,0	0/0:5,0:4:7.57:0,8,37	0/1:13,0:12:49.27:49,0,56	0/0:18,0:18:36.30:0,36,203	0/0:5,0:5:7.21:0,7,31
chr10	96484874	.	ACC	A	3085.77	PASS	AB=0.874;AC=36;AF=0.692;AN=52;BaseQRankSum=-0.906;DP=429;FS=4.010;HRun=2;HaplotypeScore=101.4426;InbreedingCoeff=0.0057;MQ=28.05;MQ0=52;MQRankSum=0.438;QD=11.22;ReadPosRankSum=-2.713;VQSLOD=-0.2250;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:20,3:22:40.71:296,0,41	./.	0/0:71,1:10:2.81:0,3,103	0/0:75,0:6:8.95:0,9,83	1/1:10,3:11:13.55:94,14,0	0/1:12,3:13:66.21:104,0,66	0/1:10,2:12:35.06:38,0,35	1/1:8,7:15:25.64:319,26,0	0/1:14,0:14:25.53:26,0,28	0/1:17,3:17:91.31:91,0,92	1/1:5,1:5:8.40:61,8,0	1/1:5,1:6:8.65:55,9,0	0/1:3,1:3:14.37:14,0,17	1/1:10,4:13:18.84:220,19,0	1/1:17,1:16:7.08:151,7,0	0/1:8,2:8:2.16:87,0,2	1/1:11,4:14:15.56:123,16,0	0/1:2,2:4:11.11:30,0,11	1/1:13,5:16:47.79:534,48,0	1/1:2,1:1:3.01:36,3,0	1/1:11,2:10:19.54:193,20,0	./.	0/0:5,0:4:8.22:0,8,37	0/1:10,0:8:6.49:20,0,6	1/1:5,0:4:5.98:48,6,0	1/1:12,0:11:12.95:121,13,0	1/1:6,11:17:42.07:514,42,0	0/1:6,0:7:22.65:68,0,23
chr10	96484881	.	AACC	A	1760.89	PASS	AB=1.000;AC=36;AF=0.667;AN=54;BaseQRankSum=0.804;DP=442;FS=24.755;HRun=0;HaplotypeScore=108.9309;InbreedingCoeff=-0.1970;MQ=28.10;MQ0=58;MQRankSum=1.577;QD=5.13;ReadPosRankSum=-2.293;VQSLOD=0.6931;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:23:56.73:274,0,57	1/1:2,0:1:3:28,3,0	0/1:79,0:11:14.16:14,0,193	0/0:84,0:7:8.59:0,9,83	0/1:11,0:9:18.78:19,0,44	0/1:15,0:13:95.05:95,0,104	0/1:13,0:13:3.83:4,0,128	1/1:15,1:15:20.46:175,20,0	0/0:14,0:14:6.20:0,6,125	0/1:20,0:16:57.65:58,0,159	1/1:7,0:6:4.64:44,5,0	0/1:6,0:6:11.53:12,0,19	1/1:4,0:3:5.44:28,5,0	0/1:13,0:12:51.62:153,0,52	0/1:18,0:16:36.43:36,0,121	0/1:10,0:8:46.89:47,0,75	1/1:9,0:7:11.76:67,12,0	1/1:4,0:4:9.45:66,9,0	1/1:19,0:16:20.26:281,20,0	1/1:3,0:1:3.01:34,3,0	1/1:10,2:9:18.54:162,19,0	./.	0/1:7,0:6:23.71:24,0,49	0/1:12,0:9:2.19:2,0,17	1/1:3,0:3:4.41:15,4,0	0/1:12,0:11:25.76:26,0,81	1/1:15,1:17:25.92:217,26,0	0/1:7,0:7:25.73:41,0,26
chr10	96484883	.	CCA	C	882.08	PASS	AB=0.978;AC=25;AF=0.463;AN=54;BaseQRankSum=1.128;DP=446;FS=15.369;HRun=0;HaplotypeScore=108.4103;InbreedingCoeff=-0.1908;MQ=28.23;MQ0=62;MQRankSum=-2.193;QD=3.74;ReadPosRankSum=-3.780;VQSLOD=0.2042;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:23:45.78:123,0,46	0/1:3,0:2:1.60:16,0,2	0/0:81,0:12:13.32:0,13,223	0/0:84,0:7:1.86:0,2,64	0/0:11,0:9:4.89:0,5,71	0/1:14,0:12:42.99:43,0,67	0/0:13,0:13:9.97:0,10,108	1/1:9,3:11:19.28:122,19,0	0/0:13,0:13:21.74:0,22,151	0/1:20,0:16:27.53:28,0,115	0/1:7,0:6:9.09:9,0,27	0/1:6,0:6:6.95:7,0,30	0/1:5,0:4:0.43:1,0,0	0/1:12,0:11:43.95:60,0,44	0/1:19,0:18:45.55:46,0,110	0/1:10,0:8:12.55:13,0,58	0/1:11,0:7:8.21:26,0,8	0/1:5,0:4:1.78:27,0,2	0/1:12,6:16:6.02:231,0,6	1/1:4,0:2:2.91:18,3,0	1/1:10,2:9:4.11:71,4,0	./.	0/0:7,0:6:4.33:0,4,60	0/1:13,0:9:3.61:4,0,25	0/1:3,0:3:1.15:1,0,1	0/1:12,0:11:23.54:24,0,73	1/1:16,2:17:2.12:136,2,0	0/1:6,1:7:24.30:24,0,29
chr10	96484894	.	ACC	A	2837.42	PASS	AB=0.911;AC=38;AF=0.679;AN=56;BaseQRankSum=-0.627;DP=424;FS=1.261;HRun=2;HaplotypeScore=94.0980;InbreedingCoeff=-0.1491;MQ=39.18;MQ0=44;MQRankSum=-0.157;QD=10.63;ReadPosRankSum=-2.205;VQSLOD=-0.1420;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:23:17.12:422,17,0	1/1:4,0:2:0.89:2,1,0	0/0:85,1:18:36.10:0,36,308	0/0:70,0:6:2.67:0,3,36	1/1:10,0:9:2.86:94,3,0	0/1:14,2:15:11.66:159,0,12	0/1:15,1:16:29.31:29,0,54	0/1:8,2:9:12.21:180,0,12	0/1:15,0:15:14.31:28,0,14	0/1:17,3:17:1.11:119,0,1	0/1:8,0:7:22.29:33,0,22	0/1:4,1:4:0.61:38,0,1	1/1:3,0:3:2.92:17,3,0	1/1:9,2:11:16.22:146,16,0	0/1:16,1:16:21.30:165,0,21	1/1:7,1:7:8.38:101,8,0	0/1:9,3:9:7.38:184,0,7	1/1:4,1:4:11.07:127,11,0	1/1:11,3:13:37.58:417,38,0	1/1:4,0:4:6.02:78,6,0	1/1:10,2:10:14.27:124,14,0	1/1:2,0:1:2.80:13,3,0	0/1:5,0:5:12.57:13,0,17	0/1:13,0:10:4.76:41,0,5	1/1:4,0:4:5.54:25,6,0	0/1:11,1:11:8.35:137,0,8	0/1:8,5:12:3.62:252,0,4	0/1:4,0:4:2.83:40,0,3
chr10	96484895	.	CCAAAA	C	1109.41	PASS	AB=0.934;AC=17;AF=0.304;AN=56;BaseQRankSum=1.223;DP=419;FS=9.373;HRun=0;HaplotypeScore=110.3952;InbreedingCoeff=0.1268;MQ=39.42;MQ0=43;MQRankSum=-2.197;QD=8.47;ReadPosRankSum=0.480;VQSLOD=1.9782;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:23:89.51:90,0,195	0/0:4,0:2:6.02:0,6,87	0/0:85,0:18:37.76:0,38,481	0/0:71,0:5:2.90:0,3,16	0/1:7,0:9:9.35:9,0,157	0/0:16,0:15:29.80:0,30,384	0/0:16,0:16:30.49:0,30,460	0/1:6,2:9:46.23:144,0,46	0/0:15,0:15:23.81:0,24,288	0/0:19,0:17:15.14:0,15,344	0/1:8,0:7:0.58:1,0,160	0/1:5,0:4:6.60:7,0,92	0/0:3,0:3:2.99:0,3,23	0/0:11,0:11:2.31:0,2,174	0/0:17,0:16:23.27:0,23,509	0/0:6,0:7:19.32:0,19,174	0/1:12,0:9:37.41:37,0,38	1/1:5,0:4:7.27:37,7,0	1/1:6,6:11:31.63:462,32,0	1/1:0,4:4:6.02:94,6,0	1/1:6,4:9:13.52:108,14,0	0/0:2,0:1:2.84:0,3,14	0/0:5,0:5:5.53:0,6,165	0/0:13,0:10:1.67:0,2,132	0/0:4,0:4:6.01:0,6,59	0/1:13,0:12:0.78:1,0,299	0/1:10,2:11:32.46:201,0,32	0/1:4,1:5:47.12:78,0,47
chr10	96484907	.	A	AC	1390.74	PASS	AB=0.801;AC=18;AF=0.321;AN=56;BaseQRankSum=-3.012;DP=394;FS=9.255;HRun=0;HaplotypeScore=99.3037;InbreedingCoeff=0.3223;MQ=46.08;MQ0=26;MQRankSum=0.775;QD=10.01;ReadPosRankSum=2.721;VQSLOD=3.8174;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:59.11:0,59,369	0/0:4,0:2:4.24:0,4,27	0/0:57,0:19:12.09:0,12,184	0/0:47,0:6:4.66:0,5,22	0/0:10,0:9:13.64:0,14,78	0/1:14,2:16:53.30:121,0,53	1/1:19,1:20:46.99:399,47,0	0/0:12,0:11:28.81:0,29,216	0/1:6,9:15:20.50:86,0,20	0/1:6,9:14:12.15:227,0,12	1/1:2,7:9:9.70:139,10,0	0/1:3,6:8:14.59:30,0,15	0/1:2,2:4:8.09:8,0,9	0/1:15,0:15:10.94:169,0,11	0/0:19,0:18:32.35:0,32,217	0/0:9,0:9:18.73:0,19,99	0/0:14,0:11:0.24:0,0,44	0/1:5,0:4:3.69:8,0,4	0/0:14,0:13:38.45:0,38,262	0/0:7,0:7:11.83:0,12,77	0/1:9,0:8:1.06:1,0,81	1/1:4,0:4:11.82:89,12,0	1/1:3,2:5:14.94:138,15,0	1/1:12,1:10:17.66:150,18,0	0/0:4,0:4:4.41:0,4,14	0/0:14,0:14:32.77:0,33,236	0/0:13,0:12:26.12:0,26,176	0/0:4,0:4:8.77:0,9,54
chr10	96484913	.	A	AAGTGTCATAGG	2372.91	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.012;DP=364;FS=2.109;HRun=0;HaplotypeScore=146.7594;InbreedingCoeff=0.7040;MQ=49.76;MQ0=13;MQRankSum=-4.424;QD=98.87;ReadPosRankSum=1.836;VQSLOD=3.4863;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:39.13:0,39,1349	0/0:4,0:2:6.02:0,6,214	0/0:35,0:14:38.90:0,39,784	0/0:31,0:6:11.22:0,11,194	0/0:11,0:10:24.08:0,24,752	0/0:11,0:11:24.08:0,24,856	0/0:20,0:20:51.18:0,51,1649	0/0:19,0:15:40.01:0,40,1026	0/0:11,0:11:3.01:0,3,107	0/0:13,0:13:32.84:0,33,881	0/0:10,0:10:18.06:0,18,628	0/0:9,0:8:3.01:0,3,107	0/0:5,0:5:6.02:0,6,142	0/0:11,0:11:30.10:0,30,1010	0/0:16,0:15:21.07:0,21,611	0/0:10,0:10:15.05:0,15,435	1/1:5,7:14:33.11:1772,33,0	1/1:7,1:7:18.06:720,18,0	0/0:19,0:16:48.12:0,48,1409	0/0:9,0:9:18.06:0,18,568	0/0:13,0:12:21.05:0,21,528	0/0:5,0:5:12.04:0,12,412	0/0:6,0:6:12:0,12,341	0/0:9,0:7:18.06:0,18,640	0/0:6,0:6:12.04:0,12,329	0/0:11,0:11:33.11:0,33,1014	0/0:13,0:12:29.95:0,30,816	0/0:7,0:7:18.01:0,18,389
chr10	96485131	.	T	TGAGA	691.24	PASS	AC=22;AF=0.917;AN=24;BaseQRankSum=-1.756;DP=28;FS=0.000;HRun=0;HaplotypeScore=13.9039;InbreedingCoeff=0.0241;MQ=93.05;MQ0=1;MQRankSum=-0.070;QD=31.42;ReadPosRankSum=-1.756;VQSLOD=2.7772;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:2:0.55:16,1,0	1/1:0,0:1:3.01:48,3,0	1/1:1,1:2:6.02:195,6,0	0/0:1,0:1:1.25:0,1,3	./.	./.	1/1:1,0:1:2.99:24,3,0	1/1:2,0:1:3.01:55,3,0	./.	./.	./.	1/1:2,0:2:3.01:50,3,0	./.	1/1:1,0:1:3.01:50,3,0	./.	./.	1/1:3,0:3:2.98:22,3,0	./.	1/1:3,0:3:9.02:134,9,0	1/1:2,0:2:3.01:41,3,0	./.	./.	./.	./.	1/1:1,0:3:9.03:130,9,0	./.	./.	./.
chr10	96485310	.	C	CT	1589.04	PASS	AB=0.725;AC=14;AF=0.250;AN=56;BaseQRankSum=0.338;DP=311;FS=6.225;HRun=8;HaplotypeScore=36.6647;InbreedingCoeff=0.7903;MQ=56.24;MQ0=12;MQRankSum=-3.346;QD=18.26;ReadPosRankSum=2.464;VQSLOD=2.9746;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:14:33.01:0,33,301	1/1:0,3:3:9.03:104,9,0	0/0:25,0:11:23.91:0,24,200	0/0:17,0:10:20.03:0,20,166	1/1:2,18:19:42.12:482,42,0	0/0:8,0:8:18.01:0,18,164	0/0:13,0:13:35.97:0,36,321	0/0:24,0:23:48.01:0,48,439	0/0:3,0:3:9:0,9,82	0/0:10,0:10:24.01:0,24,220	0/0:14,0:12:15.83:0,16,256	0/0:11,0:11:27.01:0,27,247	0/0:6,0:6:18.01:0,18,165	0/1:9,1:10:7.50:8,0,192	1/1:1,7:8:15.04:171,15,0	0/0:2,0:2:6:0,6,55	1/1:11,0:11:26.99:231,27,0	1/1:8,0:8:23.48:185,23,0	0/0:11,0:11:16.58:0,17,209	0/0:11,0:10:30.02:0,30,274	0/0:9,0:8:21.01:0,21,191	0/0:9,0:9:21.01:0,21,192	0/0:9,0:9:17.97:0,18,165	0/0:13,0:12:33.01:0,33,301	0/1:2,11:12:0.37:250,0,0	1/1:1,11:12:30.09:344,30,0	0/0:10,0:9:27.01:0,27,247	0/0:2,0:1:3:0,3,27
chr10	96485311	.	T	TC	919.82	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=6.797;DP=316;FS=4.348;HRun=1;HaplotypeScore=40.8393;InbreedingCoeff=0.6883;MQ=55.82;MQ0=13;MQRankSum=-3.051;QD=11.36;ReadPosRankSum=2.958;VQSLOD=2.0111;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:14:39.05:0,39,500	1/1:3,0:3:7.97:36,8,0	0/0:26,0:11:25.68:0,26,276	0/0:17,0:10:20.17:0,20,272	1/1:20,0:19:20.21:140,20,0	0/0:8,0:8:18.06:0,18,249	0/0:13,0:13:39.08:0,39,486	0/0:23,0:22:54.16:0,54,715	0/0:3,0:3:9.03:0,9,118	0/0:10,0:10:27.03:0,27,346	0/0:14,0:12:31.35:0,31,417	0/0:11,0:11:27.09:0,27,368	0/0:7,0:6:18.06:0,18,243	0/0:10,0:10:15.34:0,15,325	0/1:8,0:8:20.79:21,0,23	0/0:2,0:2:6.02:0,6,84	1/1:5,9:13:30.01:407,30,0	1/1:4,7:10:24.08:333,24,0	0/0:11,0:11:28.90:0,29,361	0/0:10,0:10:30.10:0,30,415	0/0:9,0:8:24.04:0,24,305	0/0:9,0:9:21.07:0,21,279	0/0:10,0:10:21.03:0,21,263	0/0:13,0:12:36.08:0,36,465	0/1:13,0:12:17.09:72,0,17	1/1:12,0:12:7.39:82,7,0	0/0:11,0:10:27.09:0,27,375	0/0:2,0:1:3.01:0,3,42
chr10	96485324	.	C	CT	497.61	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.084;DP=331;FS=1.573;HRun=8;HaplotypeScore=45.3951;InbreedingCoeff=0.7511;MQ=48.28;MQ0=15;MQRankSum=-5.748;QD=18.43;ReadPosRankSum=-0.044;VQSLOD=3.1504;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:14:36.02:0,36,329	0/0:4,0:4:9:0,9,82	0/0:20,0:6:8.88:0,9,82	0/0:13,0:6:9:0,9,80	0/0:23,0:22:32.93:0,33,295	0/0:7,0:7:15.01:0,15,137	0/0:13,0:13:39.02:0,39,357	0/0:21,0:20:38.99:0,39,353	0/0:4,0:4:9:0,9,82	0/0:10,0:10:17.95:0,18,156	0/0:17,0:15:26.99:0,27,246	0/0:15,0:15:26.98:0,27,247	0/0:7,0:6:11.99:0,12,110	0/0:11,0:11:24:0,24,219	0/0:8,0:8:21.01:0,21,191	0/0:2,0:2:6:0,6,55	1/1:3,11:13:27.08:311,27,0	1/1:4,9:12:29.63:307,30,0	0/0:15,0:15:35.02:0,35,325	0/0:11,0:11:14.98:0,15,137	0/0:9,0:9:23.05:0,23,198	0/0:10,0:9:24.01:0,24,219	0/0:11,0:11:20.97:0,21,192	0/0:15,0:14:38.97:0,39,357	0/0:13,0:12:21:0,21,190	0/0:12,0:12:30.02:0,30,274	0/0:14,0:13:36.01:0,36,329	0/0:2,0:1:3:0,3,27
chr10	96488006	.	TAGAC	T	872.66	PASS	AB=0.947;AC=5;AF=0.089;AN=56;BaseQRankSum=0.517;DP=778;FS=1.376;HRun=0;HaplotypeScore=149.8411;InbreedingCoeff=-0.1100;MQ=59.98;MQ0=12;MQRankSum=-0.987;QD=5.02;ReadPosRankSum=-6.291;VQSLOD=0.1642;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:63.12:0,63,1336	0/0:8,0:8:10.72:0,11,133	0/0:40,0:28:36.05:0,36,635	0/0:27,0:21:29.27:0,29,636	0/1:31,0:31:11.95:12,0,369	0/0:27,0:26:75.23:0,75,1624	0/0:33,0:33:78.27:0,78,1773	0/1:25,14:36:99:612,0,103	0/0:38,0:38:90.31:0,90,2102	0/0:31,0:31:75.26:0,75,1726	0/0:23,0:23:45.15:0,45,1016	0/0:22,0:22:51.18:0,51,1234	0/0:26,0:26:66.21:0,66,1480	0/0:15,0:15:42.14:0,42,959	0/0:40,0:37:5.78:0,6,497	0/0:39,0:39:86.40:0,86,2290	0/0:24,0:24:63.22:0,63,1460	0/0:21,0:21:43.86:0,44,942	0/1:22,0:18:58.42:58,0,288	0/0:25,0:23:28.35:0,28,333	0/1:43,0:43:8.40:8,0,616	0/0:19,0:19:45.14:0,45,1047	0/0:17,0:17:45.15:0,45,1054	0/0:22,0:22:47.93:0,48,1000	0/0:21,0:20:27.09:0,27,376	0/1:39,0:39:99:294,0,757	0/0:30,1:30:1.01:0,1,429	0/0:18,0:18:35.85:0,36,473
chr10	96488010	.	C	CAGAT	11247.23	PASS	AB=0.649;AC=21;AF=0.375;AN=56;BaseQRankSum=-14.327;DP=766;FS=5.641;HRun=0;HaplotypeScore=113.5613;InbreedingCoeff=0.9394;MQ=59.09;MQ0=10;MQRankSum=1.560;QD=35.82;ReadPosRankSum=4.153;VQSLOD=4.6955;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:90:0,90,1216	1/1:0,8:8:9.03:243,9,0	0/0:35,0:26:62.05:0,62,772	0/0:25,0:19:37.32:0,37,626	1/1:1,29:30:36.12:966,36,0	0/0:26,0:25:75.22:0,75,1336	0/0:33,0:33:96.23:0,96,1546	1/1:37,0:34:75.18:1022,75,0	0/0:37,0:37:99:0,105,1779	0/0:30,0:30:84.25:0,84,1468	0/0:22,0:22:41.05:0,41,877	0/0:23,0:23:66.14:0,66,1086	0/0:28,0:28:78.15:0,78,1269	0/0:14,0:14:42.12:0,42,724	1/1:0,38:36:45.15:1211,45,0	0/0:40,0:40:99:0,111,1925	0/0:24,0:24:72.19:0,72,1243	0/0:21,0:21:57.03:0,57,883	0/1:11,11:20:3.31:631,0,3	1/1:1,26:27:27.09:725,27,0	1/1:0,42:42:57.20:1512,57,0	0/0:20,0:20:54:0,54,884	0/0:17,0:17:48.15:0,48,857	0/0:21,0:21:53.95:0,54,849	1/1:0,21:20:27.09:728,27,0	1/1:1,34:35:99:2210,102,0	1/1:6,25:30:39.13:1029,39,0	1/1:0,18:18:36.12:971,36,0
chr10	96489419	.	CT	C	2336.42	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.718;DP=570;FS=3.633;HRun=3;HaplotypeScore=61.2277;InbreedingCoeff=0.9984;MQ=77.75;MQ0=0;MQRankSum=-1.467;QD=29.21;ReadPosRankSum=1.357;VQSLOD=3.0394;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:81.27:0,81,1165	1/1:0,11:11:24.08:298,24,0	0/0:24,0:23:57.12:0,57,742	0/0:26,0:26:62.95:0,63,763	1/1:1,24:25:57.14:689,57,0	0/0:17,0:17:51.17:0,51,734	0/0:33,0:33:93.27:0,93,1285	0/0:32,0:32:90.29:0,90,1261	0/0:24,0:24:69.23:0,69,993	0/0:24,0:24:72.22:0,72,1004	0/0:28,0:28:81.26:0,81,1141	0/0:19,0:19:54.18:0,54,771	0/0:22,0:22:66.22:0,66,950	0/0:23,0:23:60.18:0,60,841	1/1:0,16:16:45.14:558,45,0	0/0:16,0:16:48.15:0,48,675	0/0:20,0:20:57.18:0,57,802	0/0:12,0:12:33.08:0,33,450	0/0:21,0:21:63.19:0,63,884	0/0:22,0:22:63.21:0,63,907	0/0:19,0:19:57.19:0,57,808	0/0:12,0:12:36.11:0,36,501	0/0:12,0:12:36.11:0,36,501	0/0:20,0:20:60.20:0,60,864	1/1:1,8:9:21.07:260,21,0	1/1:0,19:19:57.18:706,57,0	0/0:19,0:19:54.18:0,54,778	0/0:16,0:16:42.14:0,42,605
chr10	96490220	.	CT	C	6340.15	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=13.042;DP=586;FS=10.812;HRun=10;HaplotypeScore=58.0518;InbreedingCoeff=0.8908;MQ=73.81;MQ0=0;MQRankSum=-0.166;QD=19.88;ReadPosRankSum=0.231;VQSLOD=5.1854;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.09:0,57,608	1/1:1,9:10:26.98:234,27,0	0/0:12,0:12:17.21:0,17,153	0/1:12,0:12:17.04:17,0,86	1/1:2,20:22:59.99:521,60,0	0/0:20,0:20:31.12:0,31,571	0/0:16,0:16:48.13:0,48,531	1/1:10,24:34:71.91:611,72,0	0/0:27,1:28:46.09:0,46,708	0/0:25,1:26:31.09:0,31,564	0/0:23,1:24:40.10:0,40,657	0/0:18,2:20:22.02:0,22,443	0/0:15,0:15:39.10:0,39,429	0/0:17,1:18:24.85:0,25,475	1/1:4,25:29:68.98:599,69,0	0/0:17,0:17:51:0,51,524	1/1:3,15:18:35.99:312,36,0	1/1:2,17:20:50.03:423,50,0	1/1:1,27:28:80.96:697,81,0	1/1:2,29:31:77.79:654,78,0	1/1:6,16:22:38.89:329,39,0	0/0:13,0:13:27.07:0,27,299	0/0:24,5:29:0.03:0,0,670	0/0:9,0:9:21.06:0,21,232	1/1:2,19:21:47.99:417,48,0	1/1:7,25:32:44.77:614,45,0	1/1:2,30:32:83.97:729,84,0	1/1:1,7:8:21:182,21,0
chr10	96491019	.	T	TA	1848.71	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-10.008;DP=587;FS=1.767;HRun=6;HaplotypeScore=58.0684;InbreedingCoeff=0.9609;MQ=67.68;MQ0=0;MQRankSum=-0.203;QD=31.87;ReadPosRankSum=0.591;VQSLOD=4.1241;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,41:42:99:1505,120,0	0/0:5,0:5:15.03:0,15,153	0/0:14,0:13:33.02:0,33,309	0/0:13,0:12:14.81:0,15,170	0/0:22,0:21:63.13:0,63,636	0/0:22,0:22:57.13:0,57,582	0/0:26,0:26:63.12:0,63,635	0/0:34,0:34:78.15:0,78,784	0/0:22,0:22:60.14:0,60,612	0/0:31,0:31:84.17:0,84,850	0/0:24,0:24:60.13:0,60,612	0/0:22,0:22:66.15:0,66,673	0/0:24,0:24:60.09:0,60,605	0/0:17,0:17:48.11:0,48,490	0/0:18,0:18:45.10:0,45,459	1/1:3,13:16:11.52:460,12,0	0/0:22,0:22:63.14:0,63,643	0/0:16,0:16:42.08:0,42,421	0/0:21,0:21:54.12:0,54,551	0/0:22,0:22:57.13:0,57,582	0/0:30,0:30:84.19:0,84,857	0/0:7,0:7:18.04:0,18,184	0/0:12,0:12:36.07:0,36,361	0/0:14,0:14:36.08:0,36,367	0/0:14,0:14:30.06:0,30,306	0/0:33,0:33:87.19:0,87,888	0/0:25,0:25:75.16:0,75,759	0/0:19,0:19:57.13:0,57,582
chr10	96491555	.	AC	A	10569.78	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.658;DP=532;FS=14.724;HRun=9;HaplotypeScore=63.9637;InbreedingCoeff=0.9771;MQ=79.30;MQ0=0;MQRankSum=-7.251;QD=21.14;ReadPosRankSum=4.815;VQSLOD=4.1423;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:26:56.05:500,56,0	1/1:1,7:8:21.01:192,21,0	0/0:20,0:19:38.78:0,39,420	0/0:12,0:12:26.70:0,27,244	1/1:4,20:24:54.01:492,54,0	1/1:1,14:15:33.02:302,33,0	1/1:4,13:17:33.01:302,33,0	1/1:10,30:40:71.93:640,72,0	1/1:1,14:15:42.02:384,42,0	1/1:2,19:21:54.02:493,54,0	1/1:2,15:18:47.06:417,47,0	1/1:4,12:17:19.48:338,19,0	1/1:1,15:16:41.80:384,42,0	1/1:3,10:13:27.01:247,27,0	1/1:3,29:32:81.04:741,81,0	1/1:3,20:23:32.44:470,32,0	1/1:2,13:15:39.02:357,39,0	1/1:2,20:22:51.91:469,52,0	1/1:4,11:15:33.01:302,33,0	1/1:4,21:25:63.02:576,63,0	1/1:4,12:16:30.01:275,30,0	1/1:1,17:18:42.02:384,42,0	1/1:2,16:18:33.01:302,33,0	1/1:2,15:17:45.02:412,45,0	1/1:2,25:27:72.04:659,72,0	1/1:1,14:15:42.02:384,42,0	1/1:2,19:21:48.02:439,48,0	1/1:1,5:6:12.01:110,12,0
chr10	96492545	.	CT	C	1823.23	PASS	AB=0.732;AC=30;AF=0.536;AN=56;BaseQRankSum=2.247;DP=560;FS=11.917;HRun=14;HaplotypeScore=70.3025;InbreedingCoeff=0.0035;MQ=60.80;MQ0=7;MQRankSum=-0.428;QD=4.72;ReadPosRankSum=5.780;VQSLOD=0.5980;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:53:99:0,110,866	1/1:5,1:6:5.75:34,6,0	0/0:16,0:8:11.89:0,12,89	0/0:11,0:7:13.77:0,14,98	0/1:9,8:19:14.80:53,0,15	0/1:9,6:15:8.04:88,0,8	0/1:4,9:13:4.14:120,0,4	0/1:12,3:14:45.62:46,0,62	1/1:8,12:20:22.69:149,23,0	1/1:6,6:13:8.01:63,8,0	0/1:6,5:11:45.09:79,0,45	0/1:19,12:31:39.11:50,0,39	0/1:11,7:18:13.11:66,0,13	0/1:15,3:17:4.85:15,0,5	1/1:5,9:14:26.72:185,27,0	0/0:8,0:12:14.66:0,15,105	0/0:39,2:40:64.64:0,65,798	0/0:41,0:41:85.80:0,86,738	0/1:11,1:11:16.93:36,0,17	0/1:14,3:16:29.93:62,0,30	1/1:13,6:21:15.98:109,16,0	0/1:10,5:15:7.67:34,0,8	1/1:12,6:18:17.01:122,17,0	0/1:18,15:34:18.58:289,0,19	1/1:7,11:19:31.69:211,32,0	0/1:10,11:22:12.16:135,0,12	0/1:11,7:18:16.94:36,0,17	1/1:7,6:13:2.95:21,3,0
chr10	96492704	.	AAC	A	7827.46	PASS	AB=0.517;AC=50;AF=0.962;AN=52;DP=219;FS=0.000;HRun=0;HaplotypeScore=224.5098;InbreedingCoeff=0.3983;MQ=28.68;MQ0=0;QD=35.74;VQSLOD=4.5644;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:12:164,12,0	1/1:0,3:3:8.99:116,9,0	./.	./.	0/1:1,7:8:0.28:0,0,1	1/1:0,7:7:20.94:239,21,0	1/1:0,5:5:12:166,12,0	1/1:0,7:7:21.07:334,21,0	1/1:0,7:7:21.07:338,21,0	1/1:0,7:7:21.07:335,21,0	1/1:0,4:4:6.02:97,6,0	1/1:0,17:17:51.13:767,51,0	1/1:0,13:13:36.07:515,36,0	1/1:1,11:12:36.11:557,36,0	1/1:1,10:11:30.10:483,30,0	1/1:0,12:12:33.07:506,33,0	1/1:0,12:11:24:330,24,0	1/1:1,4:5:12:166,12,0	1/1:0,3:3:6.02:98,6,0	1/1:0,3:3:6.02:97,6,0	1/1:0,17:17:16.94:245,17,0	1/1:0,9:9:20.88:250,21,0	1/1:2,7:9:21.07:334,21,0	0/1:0,2:2:0:0,0,0	1/1:0,5:5:15.01:198,15,0	1/1:1,15:16:48.16:764,48,0	1/1:0,10:9:27.09:436,27,0	1/1:0,6:6:18.06:292,18,0
chr10	96492716	.	CT	C	6688.13	PASS	AB=0.538;AC=47;AF=0.940;AN=50;DP=259;FS=0.000;HRun=2;HaplotypeScore=278.6633;InbreedingCoeff=0.4316;MQ=28.70;MQ0=0;QD=26.23;VQSLOD=3.9633;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,7:10:9.03:110,9,0	0/0:0,3:3:0:0,0,0	./.	./.	0/1:1,6:7:0.06:0,0,0	1/1:3,9:12:18.06:224,18,0	1/1:0,7:7:18.06:226,18,0	1/1:2,9:11:26.57:312,27,0	1/1:0,10:10:27.09:340,27,0	1/1:0,7:7:21.07:266,21,0	1/1:0,3:3:5.98:57,6,0	1/1:1,21:22:60.18:737,60,0	1/1:1,16:17:41.35:500,41,0	1/1:0,15:15:42.13:522,42,0	1/1:1,10:11:30.10:378,30,0	1/1:0,13:13:36.12:456,36,0	1/1:1,12:12:18.06:227,18,0	1/1:0,7:7:12.04:155,12,0	1/1:0,6:6:18.05:221,18,0	1/1:0,4:4:6.02:75,6,0	1/1:2,19:21:24.01:301,24,0	1/1:3,6:9:11.69:150,12,0	1/1:0,10:10:18.05:213,18,0	./.	1/1:0,6:6:12.04:152,12,0	1/1:1,15:16:44.87:537,45,0	1/1:0,11:10:30.10:376,30,0	1/1:0,7:7:12.04:153,12,0
chr10	96492722	.	G	GT	8441.33	PASS	AB=0.500;AC=47;AF=0.979;AN=48;DP=270;FS=0.000;HRun=1;HaplotypeScore=301.7560;InbreedingCoeff=0.3556;MQ=28.71;MQ0=0;QD=31.85;VQSLOD=3.6808;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:8.96:131,9,0	./.	./.	./.	0/1:0,7:7:0:0,0,0	1/1:0,9:9:18.06:267,18,0	1/1:0,8:8:18.06:266,18,0	1/1:0,11:11:33.03:485,33,0	1/1:0,12:12:30.10:450,30,0	1/1:2,6:8:21.07:326,21,0	1/1:2,2:4:6.01:68,6,0	1/1:0,23:23:63.21:900,63,0	1/1:1,16:17:47.99:648,48,0	1/1:4,16:20:42.13:592,42,0	1/1:2,13:15:30.10:441,30,0	1/1:1,14:15:42.14:620,42,0	1/1:2,9:10:21.07:297,21,0	1/1:1,6:7:15.05:226,15,0	1/1:3,6:9:21.02:293,21,0	1/1:0,4:4:6.02:87,6,0	1/1:2,17:19:24.01:348,24,0	1/1:0,7:7:12.04:174,12,0	1/1:0,10:10:18.06:246,18,0	./.	1/1:0,6:6:11.93:150,12,0	1/1:1,17:18:54.05:771,54,0	1/1:0,11:10:30.10:451,30,0	1/1:2,7:9:15:206,15,0
chr10	96492726	.	TA	T	7141.64	PASS	AC=46;AF=0.920;AN=50;DP=268;FS=0.000;HRun=2;HaplotypeScore=301.3226;InbreedingCoeff=0.4482;MQ=28.71;MQ0=0;QD=27.90;VQSLOD=3.7231;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:9.03:113,9,0	0/0:1,2:3:0:0,0,0	./.	./.	0/0:0,7:7:0:0,0,1	1/1:0,9:9:18.06:225,18,0	1/1:0,8:8:18.06:222,18,0	1/1:1,10:11:29.76:352,30,0	1/1:0,12:12:30.10:377,30,0	1/1:0,8:8:24.08:310,24,0	1/1:0,4:4:6.02:76,6,0	1/1:0,23:23:63.17:768,63,0	1/1:0,17:17:44.61:507,45,0	1/1:0,20:20:42.13:514,42,0	1/1:0,15:15:30.09:371,30,0	1/1:0,15:15:42.12:514,42,0	1/1:1,10:10:21.07:260,21,0	1/1:0,7:7:15.05:194,15,0	1/1:0,9:9:27.03:313,27,0	1/1:0,4:4:6.02:75,6,0	1/1:2,17:19:24.01:293,24,0	1/1:0,6:6:12.04:148,12,0	1/1:1,9:10:18.06:222,18,0	./.	1/1:0,6:6:9.03:113,9,0	1/1:1,17:18:50.74:605,51,0	1/1:0,11:10:30.10:378,30,0	1/1:0,8:8:15.05:191,15,0
chr10	96492732	.	TG	T	6800.80	PASS	AC=48;AF=0.923;AN=52;BaseQRankSum=1.415;DP=277;FS=0.000;HRun=3;HaplotypeScore=300.2630;InbreedingCoeff=0.4145;MQ=32.44;MQ0=0;MQRankSum=-0.521;QD=25.57;ReadPosRankSum=1.415;VQSLOD=3.3972;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,4:6:6.02:74,6,0	0/0:0,2:2:0:0,0,0	1/1:1,0:1:1.55:4,2,0	./.	0/0:2,4:6:0:0,0,0	1/1:0,11:11:18.06:223,18,0	1/1:1,8:9:18.06:222,18,0	1/1:1,8:9:24.07:294,24,0	1/1:0,14:14:36.11:445,36,0	1/1:3,6:9:14.99:186,15,0	1/1:0,4:4:6.02:74,6,0	1/1:1,22:23:60.19:742,60,0	1/1:1,17:18:45.14:556,45,0	1/1:0,23:23:45.14:556,45,0	1/1:0,15:15:36.11:445,36,0	1/1:1,15:16:39.12:482,39,0	1/1:0,10:9:21.07:260,21,0	1/1:0,7:7:15.05:186,15,0	1/1:4,8:12:23.98:297,24,0	1/1:0,3:3:6.02:74,6,0	1/1:2,17:19:24.01:296,24,0	1/1:3,3:6:9.03:111,9,0	1/1:1,9:10:18.06:222,18,0	./.	1/1:3,3:6:5.96:74,6,0	1/1:5,12:17:35.23:424,35,0	1/1:0,11:10:30.09:367,30,0	1/1:2,5:7:15.05:186,15,0
chr10	96493999	.	G	GCC	382.27	PASS	AC=18;AF=1.000;AN=18;BaseQRankSum=-1.261;DP=28;FS=0.000;HRun=0;HaplotypeScore=67.9223;MQ=29.00;MQ0=0;MQRankSum=-0.473;QD=14.70;ReadPosRankSum=-1.576;VQSLOD=2.9823;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:3:27,3,0	./.	./.	./.	./.	./.	1/1:0,4:4:8.91:65,9,0	./.	./.	1/1:1,1:2:5.22:34,5,0	./.	1/1:0,1:1:1.82:5,2,0	./.	1/1:0,1:1:2.60:10,3,0	./.	./.	1/1:1,4:5:3.30:49,3,0	1/1:0,5:5:15.04:172,15,0	./.	./.	1/1:0,5:5:12.39:88,12,0	./.	1/1:0,2:2:0.83:2,1,0	./.	./.	./.	./.	./.
chr10	96495183	.	CT	C	2212.21	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-0.551;DP=517;FS=0.427;HRun=13;HaplotypeScore=88.2026;InbreedingCoeff=0.9461;MQ=65.99;MQ0=8;MQRankSum=0.678;QD=11.06;ReadPosRankSum=4.836;VQSLOD=3.4696;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:24.59:0,25,165	0/0:1,0:9:20:0,20,105	0/0:48,0:14:16.97:0,17,115	0/0:22,0:6:2.53:0,3,10	0/0:10,0:36:66.13:0,66,363	1/1:1,18:19:38.77:282,39,0	1/1:3,9:14:28.10:184,28,0	0/0:29,0:29:61.11:0,61,443	1/1:2,9:11:17.89:130,18,0	1/1:7,17:24:48.77:317,49,0	1/1:2,15:18:45.72:301,46,0	1/1:5,12:17:24.73:176,25,0	1/1:1,11:14:32.33:218,32,0	1/1:0,7:8:19.93:136,20,0	0/0:2,0:13:22.76:0,23,115	0/0:16,0:16:10.50:0,10,74	1/1:20,0:20:25.44:111,25,0	1/1:12,0:12:16.87:72,17,0	0/0:22,0:22:19.79:0,20,250	0/0:18,0:18:24:0,24,247	0/0:8,0:8:8.90:0,9,60	1/1:1,11:13:26.55:182,27,0	1/1:4,12:17:24.49:165,24,0	1/1:5,8:13:16.86:164,17,0	0/0:4,0:17:31.40:0,31,163	0/0:6,0:20:47.28:0,47,251	0/0:17,1:18:10.27:0,10,163	0/0:11,0:11:31.89:0,32,206
chr10	96495194	.	T	TA	312.53	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=3.823;DP=516;FS=7.997;HRun=0;HaplotypeScore=101.9256;InbreedingCoeff=0.4671;MQ=67.02;MQ0=10;MQRankSum=-1.367;QD=5.12;ReadPosRankSum=2.829;VQSLOD=3.0184;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:42.29:0,42,304	0/0:9,0:9:9.28:0,9,52	0/0:52,0:15:26.46:0,26,206	0/0:26,0:6:0.11:0,0,54	0/0:34,0:34:62.08:0,62,346	0/0:19,0:19:13.35:0,13,50	0/0:12,0:12:13.56:0,14,64	0/0:29,0:29:85.83:0,86,773	0/0:11,0:11:8.10:0,8,51	0/0:20,0:20:4.11:0,4,79	0/0:20,0:20:26.60:0,27,155	0/1:16,0:16:5.78:6,0,62	0/0:14,0:14:10:0,10,48	0/0:9,0:9:5.72:0,6,24	0/0:15,0:15:19.02:0,19,124	0/0:17,0:17:29.07:0,29,144	1/1:10,9:19:10.54:235,11,0	1/1:5,7:12:19.79:186,20,0	0/0:22,0:22:65.56:0,66,596	0/0:16,0:16:45.66:0,46,455	0/0:6,0:6:8.92:0,9,61	0/0:14,0:14:13.47:0,13,71	0/1:14,0:14:6.72:7,0,28	0/0:11,0:11:14.88:0,15,89	0/0:16,0:16:20.51:0,21,153	0/0:24,0:24:49.81:0,50,331	0/0:19,0:19:32.80:0,33,285	0/0:11,0:11:32.72:0,33,243
chr10	96495196	.	T	TA	4805.42	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-7.464;DP=514;FS=18.657;HRun=9;HaplotypeScore=87.3277;InbreedingCoeff=0.8441;MQ=68.21;MQ0=10;MQRankSum=0.389;QD=14.83;ReadPosRankSum=3.489;VQSLOD=3.6098;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:27:22.73:0,23,68	0/0:8,0:8:6.77:0,7,26	0/0:51,0:16:21.52:0,22,111	0/1:25,0:6:7.76:8,0,44	0/0:33,0:33:45.20:0,45,215	1/1:19,0:19:41.10:255,41,0	1/1:12,0:12:30.88:187,31,0	1/1:6,23:30:65.51:565,66,0	1/1:12,0:12:26.72:187,27,0	1/1:20,0:20:47.18:330,47,0	1/1:20,0:20:47.34:317,47,0	1/1:15,0:15:32.59:220,33,0	1/1:14,0:14:29.64:198,30,0	1/1:9,0:9:23.72:161,24,0	0/0:15,0:15:12.16:0,12,55	0/0:4,0:18:16.12:0,16,48	1/1:18,0:20:47.82:341,48,0	1/1:12,0:13:32.85:255,33,0	1/1:5,15:21:21.94:381,22,0	1/1:9,7:17:25.70:216,26,0	1/1:0,6:6:9.02:97,9,0	1/1:15,0:15:32.48:220,32,0	1/1:14,0:14:23.63:154,24,0	1/1:12,0:12:29.57:183,30,0	0/0:14,0:14:4.27:0,4,40	0/0:23,0:23:27.39:0,27,122	1/1:4,15:19:3.37:204,3,0	1/1:1,10:11:31.63:328,32,0
chr10	96496921	.	AT	A	1918.66	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=8.600;DP=316;FS=3.239;HRun=8;HaplotypeScore=41.1687;InbreedingCoeff=0.6627;MQ=73.05;MQ0=6;MQRankSum=-0.584;QD=14.76;ReadPosRankSum=1.197;VQSLOD=3.1124;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:51.11:0,51,599	0/0:2,0:2:3.01:0,3,36	0/0:7,0:6:5.47:0,5,25	0/1:9,0:8:10.66:11,0,45	0/0:21,0:21:60.17:0,60,713	0/0:22,0:21:54.11:0,54,626	0/0:6,0:6:12.02:0,12,132	1/1:8,22:27:66.10:637,66,0	0/0:7,0:7:21.05:0,21,243	0/0:12,0:12:30.09:0,30,361	0/0:10,0:10:27.08:0,27,324	0/0:3,0:3:9.03:0,9,109	0/0:4,0:4:12.04:0,12,145	0/0:2,0:2:3.01:0,3,36	0/0:5,0:5:9.03:0,9,109	0/0:10,0:10:24.07:0,24,289	0/1:25,0:25:0.21:0,0,24	0/0:18,0:18:3.64:0,4,64	1/1:4,13:16:39.06:377,39,0	1/1:2,11:12:27.04:261,27,0	1/1:0,4:4:9.01:87,9,0	0/0:2,0:2:3.01:0,3,36	0/0:6,0:6:15.05:0,15,180	0/0:2,0:2:3.01:0,3,36	0/0:12,0:12:30.07:0,30,347	0/0:15,0:15:42.13:0,42,503	1/1:5,8:12:24.03:232,24,0	1/1:2,17:19:51.08:493,51,0
chr10	96496922	.	T	TA	671.63	PASS	AB=0.903;AC=5;AF=0.089;AN=56;BaseQRankSum=8.288;DP=313;FS=25.463;HRun=1;HaplotypeScore=44.8684;InbreedingCoeff=0.4782;MQ=73.35;MQ0=6;MQRankSum=-1.290;QD=9.88;ReadPosRankSum=1.756;VQSLOD=-0.3420;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.12:0,57,739	0/0:2,0:2:5.99:0,6,64	0/0:7,0:6:4.92:0,5,81	0/0:9,0:8:2.73:0,3,50	0/0:21,0:21:63.19:0,63,835	0/0:22,0:21:60.13:0,60,768	0/0:5,0:5:14.96:0,15,169	0/1:25,3:24:49.41:49,0,178	0/0:7,0:7:21.06:0,21,279	0/0:12,0:12:30.10:0,30,412	0/0:10,0:10:30.08:0,30,387	0/0:3,0:3:9.03:0,9,119	0/0:4,0:4:12.04:0,12,167	0/0:2,0:2:3.01:0,3,42	0/0:5,0:5:12.03:0,12,153	0/0:10,0:10:30.08:0,30,381	1/1:8,14:23:30.65:431,31,0	1/1:4,13:17:16.21:317,16,0	0/0:16,1:16:33.98:0,34,175	0/0:13,1:13:31.40:0,31,145	0/0:5,0:5:7.49:0,7,27	0/0:2,0:2:6.01:0,6,69	0/0:7,0:7:18.05:0,18,229	0/0:2,0:2:6.01:0,6,68	0/0:12,0:12:33.09:0,33,415	0/0:15,0:15:45.14:0,45,590	0/0:13,1:13:3.63:0,4,135	0/0:19,0:19:48.42:0,48,203
chr10	96496923	.	T	TATA	1138.06	PASS	AB=0.729;AC=3;AF=0.054;AN=56;BaseQRankSum=8.546;DP=311;FS=8.919;HRun=0;HaplotypeScore=57.2688;InbreedingCoeff=0.0548;MQ=73.49;MQ0=6;MQRankSum=-0.404;QD=24.21;ReadPosRankSum=2.942;VQSLOD=2.6508;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:55.05:0,55,947	0/0:1,0:1:3.01:0,3,56	0/1:7,0:6:1.68:2,0,96	0/0:9,0:8:14.65:0,15,148	0/0:22,0:22:63.22:0,63,1160	0/0:22,0:21:63.18:0,63,1061	0/0:5,0:5:15.05:0,15,268	0/0:28,0:24:75.18:0,75,831	0/0:8,0:8:21.07:0,21,387	0/0:12,0:12:33.11:0,33,597	0/0:9,0:9:27.09:0,27,475	0/0:3,0:3:9.03:0,9,167	0/0:4,0:4:12.04:0,12,223	0/0:1,0:1:3.01:0,3,56	0/0:5,0:5:15.01:0,15,239	0/0:9,0:9:27.08:0,27,468	0/1:9,9:23:4.37:630,0,4	0/1:4,13:17:23.90:596,0,24	0/0:17,0:16:48.07:0,48,503	0/0:13,0:12:36.08:0,36,387	0/0:5,0:5:12.01:0,12,117	0/0:2,0:2:6.02:0,6,106	0/0:7,0:7:21.04:0,21,324	0/0:2,0:2:6.01:0,6,83	0/0:12,0:12:30.10:0,30,521	0/0:15,0:15:45.14:0,45,781	0/0:13,0:12:35.56:0,36,376	0/0:21,0:21:57.11:0,57,577
chr10	96497068	.	C	CT	1572.30	PASS	AB=0.840;AC=23;AF=0.411;AN=56;BaseQRankSum=-3.323;DP=414;FS=1.135;HRun=14;HaplotypeScore=49.0431;InbreedingCoeff=0.5497;MQ=82.83;MQ0=3;MQRankSum=-1.162;QD=7.71;ReadPosRankSum=-1.814;VQSLOD=1.7316;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:29.07:0,29,179	1/1:1,5:6:11.91:91,12,0	0/1:28,0:18:2.73:3,0,36	0/0:28,0:17:0.38:0,0,35	0/1:12,12:24:9.14:144,0,9	0/0:22,1:25:24.79:0,25,267	0/0:13,1:14:3.21:0,3,146	1/1:10,10:20:7.54:176,8,0	0/0:7,0:7:8.33:0,8,57	0/1:12,0:12:2.13:2,0,108	0/0:21,0:21:17.13:0,17,216	0/0:5,0:5:8.79:0,9,56	0/0:7,0:7:13.84:0,14,83	0/0:10,0:13:19.67:0,20,118	1/1:1,9:11:14.84:120,15,0	0/0:12,1:13:0.26:0,0,127	0/0:20,0:22:45.35:0,45,280	0/0:16,0:16:19.17:0,19,159	1/1:4,7:13:12.85:180,13,0	1/1:2,12:15:26.84:214,27,0	1/1:4,6:11:29.79:241,30,0	0/1:8,1:9:5.74:6,0,91	0/0:13,0:13:17.61:0,18,114	0/0:5,0:5:8.82:0,9,58	1/1:4,8:12:14.94:123,15,0	0/1:8,11:19:26.67:144,0,27	1/1:4,11:15:10.43:188,10,0	1/1:0,9:9:15:132,15,0
chr10	96499031	.	GT	G	6027.96	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.634;DP=589;FS=0.000;HRun=9;HaplotypeScore=115.8112;InbreedingCoeff=0.9019;MQ=74.16;MQ0=4;MQRankSum=-3.249;QD=11.31;ReadPosRankSum=5.383;VQSLOD=3.5532;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:39.01:357,39,0	1/1:9,0:9:23.07:140,23,0	0/0:35,0:21:23.74:0,24,227	0/0:20,0:18:20.75:0,21,208	1/1:21,0:21:49.67:293,50,0	1/1:20,0:20:35.07:207,35,0	1/1:22,1:23:49.71:295,50,0	1/1:32,0:32:57.38:204,57,0	1/1:21,0:21:40.96:244,41,0	1/1:17,0:17:44.09:282,44,0	1/1:16,2:18:43.79:257,44,0	1/1:22,2:23:55.64:340,56,0	1/1:15,0:15:32.16:190,32,0	1/1:17,1:18:38.02:225,38,0	1/1:20,0:20:43.83:260,44,0	1/1:3,9:12:12:110,12,0	1/1:23,0:23:55.56:329,56,0	1/1:20,0:20:38.01:224,38,0	1/1:27,0:27:49.99:173,50,0	1/1:23,0:22:42.49:134,42,0	1/1:28,0:28:23.42:76,23,0	1/1:20,0:20:40.92:243,41,0	1/1:13,1:14:35.09:208,35,0	1/1:34,0:34:84.81:501,85,0	1/1:19,0:18:38:225,38,0	1/1:26,1:27:67.29:403,67,0	1/1:21,0:21:31.54:101,32,0	1/1:1,0:1:2.04:6,2,0
chr10	96499038	.	TTTGG	T	5720.91	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-13.556;DP=605;FS=7.923;HRun=0;HaplotypeScore=151.5872;InbreedingCoeff=0.9611;MQ=76.08;MQ0=4;MQRankSum=-6.039;QD=43.34;ReadPosRankSum=-2.082;VQSLOD=4.5332;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:48.14:0,48,673	0/0:9,0:9:20.36:0,20,101	0/0:39,0:24:35.20:0,35,702	0/0:25,0:21:55.65:0,56,792	0/0:19,0:19:48.80:0,49,272	0/0:20,0:20:34.09:0,34,171	0/0:24,0:24:51.09:0,51,255	1/1:0,32:32:96.29:1601,96,0	0/0:21,0:21:42.77:0,43,220	0/0:21,0:21:42.43:0,42,199	0/0:20,0:20:46.67:0,47,257	0/0:24,0:23:54.14:0,54,300	0/0:15,0:15:34.20:0,34,180	0/0:19,0:19:36.93:0,37,185	0/0:21,0:21:48.33:0,48,251	0/0:11,0:11:18.06:0,18,266	0/0:24,0:24:56.98:0,57,316	0/0:18,0:18:36.93:0,37,186	1/1:0,26:26:78.24:1314,78,0	1/1:1,25:25:75.20:1272,75,0	1/1:0,27:27:36.11:638,36,0	0/0:22,0:22:40.72:0,41,225	0/0:13,0:13:34.05:0,34,170	0/0:37,0:37:68.22:0,68,385	0/0:19,0:18:45.92:0,46,262	0/0:25,0:25:62.59:0,63,308	1/1:0,20:20:45.15:838,45,0	1/1:0,1:1:3.01:58,3,0
chr10	96499039	.	TTG	T	13421.41	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-5.925;DP=598;FS=13.645;HRun=0;HaplotypeScore=102.9600;InbreedingCoeff=0.9068;MQ=75.47;MQ0=4;MQRankSum=-4.567;QD=26.90;ReadPosRankSum=6.830;VQSLOD=4.8682;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:32.37:0,32,110	1/1:0,9:9:23.90:322,24,0	0/0:38,0:23:4.46:0,4,268	0/0:24,0:20:24.26:0,24,360	1/1:1,18:19:32.69:702,33,0	1/1:0,20:20:36.12:519,36,0	1/1:1,23:24:54.15:758,54,0	1/1:32,0:32:84.37:394,84,0	1/1:1,20:21:42.08:582,42,0	1/1:0,21:21:59.90:651,60,0	1/1:2,18:20:47.96:638,48,0	1/1:2,22:23:50.43:774,50,0	1/1:0,14:14:33.11:476,33,0	1/1:1,18:19:39.12:563,39,0	1/1:0,20:20:48.11:669,48,0	0/0:11,0:11:14.13:0,14,72	1/1:1,23:24:37.63:800,38,0	1/1:0,18:18:39.13:562,39,0	1/1:26,0:26:70.92:332,71,0	1/1:26,0:25:67.43:318,67,0	1/1:27,0:27:33.83:163,34,0	1/1:0,22:22:53.95:682,54,0	1/1:1,12:13:36.12:520,36,0	1/1:0,36:37:87.27:1235,87,0	1/1:1,16:16:37.03:560,37,0	1/1:1,24:25:75.03:990,75,0	1/1:20,0:20:42.09:198,42,0	1/1:1,0:1:2.80:13,3,0
chr10	96499507	.	TTC	T	826.29	PASS	AB=0.989;AC=21;AF=0.375;AN=56;BaseQRankSum=9.135;DP=536;FS=32.695;HRun=0;HaplotypeScore=95.6948;InbreedingCoeff=-0.3299;MQ=54.12;MQ0=33;MQRankSum=-1.899;QD=2.25;ReadPosRankSum=7.846;VQSLOD=-0.2585;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:52.01:0,52,476	0/0:3,0:3:8.76:0,9,52	0/1:58,0:17:4.40:4,0,115	0/0:48,0:14:0.11:0,0,111	0/0:23,0:22:8.30:0,8,302	0/1:18,1:19:39.21:39,0,97	0/0:13,0:13:3.49:0,3,105	0/1:18,0:18:18.30:18,0,135	0/1:19,0:19:61.84:62,0,72	0/1:24,0:23:43.15:43,0,180	0/1:17,0:16:61.24:61,0,90	1/1:13,0:13:12.36:88,12,0	0/1:14,1:15:57.12:66,0,57	0/1:10,0:10:5.23:5,0,57	0/0:14,1:15:9.59:0,10,189	0/0:13,0:13:33.11:0,33,434	0/1:26,0:26:84.41:84,0,104	0/1:24,0:23:43.49:43,0,93	0/1:20,0:16:10.32:10,0,108	0/1:12,0:11:31.60:83,0,32	0/1:15,0:14:3.79:4,0,135	0/1:9,0:9:34.21:34,0,36	0/1:20,1:20:5.48:72,0,5	0/1:14,0:14:45.27:66,0,45	0/0:15,0:15:12.87:0,13,162	0/0:20,0:20:51.23:0,51,413	0/1:26,1:27:99:169,0,139	1/1:7,0:7:2.61:29,3,0
chr10	96499509	.	CTT	C	3753.39	PASS	AB=0.640;AC=37;AF=0.661;AN=56;BaseQRankSum=-2.061;DP=528;FS=7.777;HRun=16;HaplotypeScore=86.8059;InbreedingCoeff=0.7207;MQ=52.55;MQ0=34;MQRankSum=2.680;QD=11.17;ReadPosRankSum=4.574;VQSLOD=2.5579;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:18:22.87:0,23,333	0/0:2,0:3:2.37:0,2,9	0/0:55,0:14:5.28:0,5,46	0/0:47,0:14:6.01:0,6,63	0/0:13,1:21:14.49:0,14,56	1/1:9,9:19:33.41:271,33,0	1/1:6,6:13:20.55:162,21,0	1/1:12,6:18:14.01:124,14,0	1/1:6,11:18:35.56:287,36,0	0/1:8,16:23:3.60:240,0,4	1/1:9,8:16:26.35:197,26,0	1/1:3,10:13:23.59:175,24,0	1/1:8,5:15:22.15:153,22,0	1/1:5,5:10:11.36:84,11,0	0/1:7,0:15:2.29:2,0,71	0/0:10,1:13:13.37:0,13,390	1/1:10,15:27:24.87:272,25,0	1/1:6,17:22:38.85:326,39,0	0/1:10,7:16:2.72:132,0,3	1/1:7,4:11:20.39:151,20,0	1/1:8,6:14:10.95:86,11,0	1/1:3,5:9:17.67:137,18,0	1/1:5,15:20:38.67:312,39,0	1/1:5,7:13:20.68:162,21,0	0/0:8,0:14:14.83:0,15,68	0/0:15,1:19:4.55:0,5,184	1/1:13,13:26:39.64:359,40,0	1/1:1,4:7:16.56:122,17,0
chr10	96499548	.	G	GTTTTTGT	8584.04	PASS	AB=0.696;AC=25;AF=0.446;AN=56;BaseQRankSum=-4.298;DP=399;FS=2.136;HRun=0;HaplotypeScore=160.0591;InbreedingCoeff=0.7810;MQ=61.10;MQ0=5;MQRankSum=-5.033;QD=52.02;ReadPosRankSum=-1.698;VQSLOD=4.2809;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,9:18:33.11:1157,33,0	1/1:1,1:2:3.01:110,3,0	0/0:30,0:22:7.22:0,7,160	0/0:28,0:16:0.50:0,1,79	1/1:4,4:8:18.06:583,18,0	0/0:16,0:16:27.09:0,27,574	0/0:6,0:6:6.02:0,6,136	1/1:19,0:18:27.09:818,27,0	0/0:12,0:12:18.06:0,18,402	0/0:23,0:22:30.10:0,30,644	0/0:10,0:10:27.09:0,27,612	0/0:15,0:15:15.05:0,15,317	0/0:11,0:11:15.05:0,15,338	0/0:10,0:10:18.06:0,18,408	1/1:5,8:13:24.08:878,24,0	1/1:8,4:12:18.06:614,18,0	0/0:16,0:16:12.04:0,12,242	0/0:18,0:17:20.67:0,21,443	1/1:16,5:19:27.09:860,27,0	1/1:6,7:13:24.08:878,24,0	1/1:7,1:8:6.02:220,6,0	0/0:12,0:12:18.05:0,18,366	0/0:17,0:17:15.05:0,15,340	0/0:10,0:10:6.02:0,6,136	1/1:4,2:6:9.03:317,9,0	0/1:9,7:16:99:979,0,100	1/1:13,8:21:30.09:1012,30,0	1/1:6,1:7:9:158,9,0
chr10	96499605	.	C	CT	3880.10	PASS	AC=46;AF=1.000;AN=46;DP=108;FS=0.000;HRun=0;HaplotypeScore=75.4402;InbreedingCoeff=-0.0688;MQ=28.55;MQ0=0;QD=37.31;VQSLOD=3.6938;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:21.07:327,21,0	./.	./.	./.	1/1:0,2:2:3.01:45,3,0	1/1:0,6:6:18.06:279,18,0	1/1:0,2:2:3.01:48,3,0	1/1:0,2:2:6.02:96,6,0	./.	1/1:0,7:7:21.07:334,21,0	1/1:1,2:2:3.01:45,3,0	1/1:1,5:5:12.04:185,12,0	1/1:0,2:2:6.02:94,6,0	1/1:1,4:4:9.03:142,9,0	1/1:0,5:5:15.05:234,15,0	1/1:0,4:4:12.04:190,12,0	1/1:0,2:2:6.02:93,6,0	1/1:0,6:6:15.05:238,15,0	1/1:0,3:3:9.03:143,9,0	1/1:0,4:4:9.03:139,9,0	1/1:0,2:2:6.02:94,6,0	1/1:0,5:5:15.05:230,15,0	1/1:0,3:3:9.03:126,9,0	1/1:1,6:7:9.03:139,9,0	./.	1/1:1,8:9:24.08:379,24,0	1/1:1,9:9:15.05:233,15,0	1/1:0,1:1:3.01:48,3,0
chr10	96499609	.	GC	G	2619.50	PASS	AC=44;AF=1.000;AN=44;DP=106;FS=0.000;HRun=3;HaplotypeScore=79.8454;InbreedingCoeff=-0.0779;MQ=28.17;MQ0=0;QD=25.94;VQSLOD=2.7054;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:18.05:215,18,0	./.	./.	./.	1/1:1,1:2:3.01:35,3,0	1/1:0,6:6:18.05:215,18,0	./.	1/1:1,1:2:3.01:37,3,0	./.	1/1:0,7:7:21.07:259,21,0	1/1:0,3:2:3.01:34,3,0	1/1:0,6:5:12.04:143,12,0	1/1:1,1:2:3.01:36,3,0	1/1:0,5:4:9.03:110,9,0	1/1:1,4:5:12.04:144,12,0	1/1:1,3:4:9.03:110,9,0	1/1:0,2:2:6.02:71,6,0	1/1:0,6:6:15.05:184,15,0	1/1:1,2:3:6.02:74,6,0	1/1:1,3:4:9.03:106,9,0	1/1:0,2:2:3.01:35,3,0	1/1:0,5:5:15.05:177,15,0	1/1:0,3:3:9.01:95,9,0	1/1:0,7:7:9.03:107,9,0	./.	1/1:0,8:8:24.07:293,24,0	1/1:4,6:9:15.05:178,15,0	1/1:0,1:1:3.01:37,3,0
chr10	96499872	.	AATT	A	58.64	PASS	AC=8;AF=0.500;AN=16;BaseQRankSum=0.312;DP=25;FS=0.000;HRun=0;HaplotypeScore=29.7452;MQ=23.41;MQ0=6;MQRankSum=-2.281;QD=6.52;ReadPosRankSum=-1.656;VQSLOD=1.1447;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:1:2.80:0,3,13	./.	./.	./.	./.	./.	1/1:2,1:1:2.97:20,3,0	0/0:2,0:2:6.02:0,6,141	./.	./.	./.	./.	./.	./.	./.	0/0:2,0:2:5.49:0,5,24	1/1:0,2:2:6:68,6,0	./.	./.	./.	1/1:0,1:2:5.68:39,6,0	./.	./.	1/1:0,2:2:2.25:20,2,0	0/0:1,0:1:2.80:0,3,13	./.	./.	./.
chr10	96499885	.	T	TC	76.23	PASS	AC=12;AF=0.857;AN=14;DP=12;FS=0.000;HRun=0;HaplotypeScore=36.4228;MQ=27.44;MQ0=1;QD=8.47;VQSLOD=2.8525;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:3.01:47,3,0	./.	./.	./.	./.	./.	0/0:0,1:1:0:0,0,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,2:2:5.98:47,6,0	1/1:0,2:2:3.43:20,3,0	./.	./.	./.	1/1:0,1:1:1.82:5,2,0	./.	./.	1/1:0,2:2:0.89:2,1,0	1/1:0,1:1:2.99:23,3,0	./.	./.	./.
chr10	96503712	.	TA	T	3994.38	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=1.618;DP=491;FS=3.106;HRun=13;HaplotypeScore=81.5073;InbreedingCoeff=0.8109;MQ=74.11;MQ0=3;MQRankSum=1.816;QD=12.18;ReadPosRankSum=4.850;VQSLOD=3.8631;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,4:43:27.13:0,27,716	1/1:2,3:5:5.93:44,6,0	0/0:47,0:20:13.48:0,13,116	0/1:33,0:21:14.23:14,0,78	1/1:2,10:12:23.79:171,24,0	1/1:2,12:14:23.85:175,24,0	1/1:2,19:22:46.77:334,47,0	0/1:29,0:29:2.29:2,0,409	1/1:5,12:18:39.96:271,40,0	1/1:1,11:12:32.81:241,33,0	1/1:3,7:10:23.75:168,24,0	1/1:4,11:15:20.87:153,21,0	1/1:3,9:12:23.83:175,24,0	1/1:2,10:13:28.88:203,29,0	1/1:0,6:7:19.93:137,20,0	0/0:7,0:7:21.03:0,21,204	1/1:2,21:25:57.77:406,58,0	1/1:3,20:24:23.58:327,24,0	0/0:17,0:16:32.96:0,33,296	0/0:12,0:12:9.45:0,9,181	0/0:7,0:7:15.02:0,15,146	1/1:1,2:3:5.96:44,6,0	1/1:1,3:4:8.95:66,9,0	1/1:3,12:15:23.83:175,24,0	1/1:4,25:29:62.53:459,63,0	1/1:3,21:24:36.43:430,36,0	0/0:14,0:14:39:0,39,363	0/0:15,0:15:17.48:0,17,169
chr10	96503878	.	C	CA	1692.97	PASS	AB=0.844;AC=37;AF=0.661;AN=56;BaseQRankSum=3.256;DP=368;FS=2.270;HRun=15;HaplotypeScore=65.7623;InbreedingCoeff=0.5518;MQ=78.96;MQ0=0;MQRankSum=-3.491;QD=6.39;ReadPosRankSum=-4.247;VQSLOD=1.4996;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:26.92:0,27,264	0/0:6,0:6:8.75:0,9,54	0/0:17,0:13:2.69:0,3,23	0/1:13,0:10:1.98:4,0,2	0/0:13,0:14:10.68:0,11,59	1/1:9,10:19:35.96:302,36,0	1/1:2,8:10:5.99:50,6,0	1/1:14,1:18:15.06:91,15,0	1/1:8,3:12:26.60:187,27,0	1/1:4,11:17:11.68:180,12,0	1/1:4,3:7:9.88:77,10,0	0/1:10,2:12:16.91:76,0,17	1/1:4,6:10:8.95:69,9,0	1/1:10,0:10:19.13:135,19,0	0/1:5,2:7:13.38:13,0,42	0/0:9,0:9:13.99:0,14,79	1/1:7,2:27:16.03:90,16,0	1/1:2,0:6:5.68:28,6,0	1/1:14,0:15:23.32:127,23,0	1/1:19,0:19:22.03:118,22,0	1/1:8,0:7:5.81:31,6,0	1/1:2,5:7:2.96:19,3,0	0/1:2,3:6:0:0,0,0	0/1:10,1:11:20.99:57,0,21	0/0:11,0:13:13.70:0,14,78	0/0:11,0:13:27.55:0,28,155	1/1:16,0:15:28.71:151,29,0	1/1:6,0:12:14.20:71,14,0
chr10	96503965	.	GGT	G	3929.39	PASS	AB=0.860;AC=13;AF=0.232;AN=56;BaseQRankSum=-6.854;DP=461;FS=0.000;HRun=0;HaplotypeScore=114.8369;InbreedingCoeff=0.7204;MQ=57.71;MQ0=10;MQRankSum=-0.465;QD=27.29;ReadPosRankSum=-0.679;VQSLOD=4.7163;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:29:23.47:117,0,23	0/0:8,0:8:17.56:0,18,127	0/0:29,0:11:27.55:0,28,410	0/0:43,0:17:11.02:0,11,175	0/0:18,0:18:42.81:0,43,368	0/0:16,0:16:48:0,48,602	0/0:8,0:8:24.01:0,24,240	1/1:3,18:20:32.19:570,32,0	0/0:12,0:12:30.07:0,30,368	0/0:15,0:15:45.14:0,45,560	0/0:13,0:12:30.06:0,30,378	0/0:14,0:15:45.06:0,45,526	0/0:6,0:6:18.06:0,18,239	0/0:9,0:9:27.05:0,27,337	0/0:8,0:8:17.74:0,18,154	0/1:2,0:11:17.34:20,0,17	0/0:38,0:38:62.33:0,62,930	0/0:21,0:21:38.28:0,38,512	0/1:6,15:19:2.96:699,0,3	1/1:3,16:16:48.08:692,48,0	1/1:1,6:7:17.83:229,18,0	0/0:5,0:5:15:0,15,166	0/0:6,0:6:12.04:0,12,154	0/0:10,0:10:29.87:0,30,326	0/0:17,0:17:37.73:0,38,263	0/0:20,0:20:56.26:0,56,537	1/1:6,15:21:63.07:926,63,0	1/1:0,14:14:42.14:677,42,0
chr10	96503966	.	G	GT	3498.61	PASS	AB=0.738;AC=24;AF=0.429;AN=56;BaseQRankSum=-6.605;DP=468;FS=2.588;HRun=9;HaplotypeScore=115.6182;InbreedingCoeff=0.8268;MQ=57.20;MQ0=10;MQRankSum=-2.533;QD=21.46;ReadPosRankSum=-2.333;VQSLOD=2.2683;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:62.71:656,63,0	0/0:7,0:7:15.45:0,15,79	0/0:29,0:11:16.86:0,17,116	0/0:43,0:17:12.60:0,13,88	0/0:19,0:19:35.81:0,36,183	1/1:5,11:16:20.08:345,20,0	1/1:4,3:7:12.01:121,12,0	0/0:21,0:20:21.48:0,21,71	1/1:3,8:11:27.07:299,27,0	1/1:6,11:16:45.05:472,45,0	1/1:5,10:14:3.91:245,4,0	1/1:6,11:17:44.77:430,45,0	1/1:2,5:7:17.33:171,17,0	0/1:7,3:10:5.06:154,0,5	0/0:8,0:8:12.61:0,13,60	1/1:11,0:11:26.25:260,26,0	0/0:38,0:38:56.97:0,57,528	0/0:20,0:21:42.75:0,43,328	0/0:23,0:19:40.17:0,40,145	0/0:18,0:15:28.66:0,29,87	0/0:7,0:7:8.06:0,8,31	1/1:1,4:5:12.03:127,12,0	1/1:2,2:6:8.69:61,9,0	0/1:7,5:12:5.06:157,0,5	0/0:17,0:17:31.95:0,32,128	0/0:20,0:20:49.04:0,49,244	0/0:20,0:20:38.79:0,39,118	0/0:14,0:14:31.08:0,31,96
chr10	96503971	.	TTTTTG	T	3913.63	PASS	AB=0.937;AC=13;AF=0.232;AN=56;BaseQRankSum=-10.723;DP=468;FS=2.323;HRun=0;HaplotypeScore=139.8713;InbreedingCoeff=0.6541;MQ=56.93;MQ0=10;MQRankSum=4.170;QD=23.86;ReadPosRankSum=2.574;VQSLOD=3.4659;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:63.20:0,63,1228	1/1:0,7:7:18.06:296,18,0	0/1:28,0:11:7.23:25,0,7	0/0:42,0:16:4.15:0,4,14	1/1:3,18:21:42.02:654,42,0	0/0:15,0:15:33.11:0,33,688	0/0:6,0:6:12.02:0,12,193	0/0:19,0:18:26.91:0,27,344	0/0:10,0:10:21.07:0,21,464	0/0:17,0:16:33.11:0,33,667	0/0:16,0:15:27.09:0,27,488	0/0:17,0:17:36.10:0,36,625	0/0:7,0:7:18.06:0,18,379	0/0:9,0:9:9.03:0,9,141	1/1:1,6:7:12.04:221,12,0	0/0:12,0:12:24.06:0,24,379	0/1:34,3:37:38.86:598,0,39	0/1:20,3:23:17.54:571,0,18	0/0:22,0:18:27.55:0,28,392	0/0:18,0:15:36.07:0,36,406	0/0:9,0:9:18.02:0,18,206	0/0:6,0:6:18.06:0,18,340	0/0:6,0:6:6.02:0,6,132	0/0:12,0:12:24.07:0,24,389	1/1:1,17:18:36.12:664,36,0	1/1:4,18:22:51.16:885,51,0	0/0:20,0:20:36.11:0,36,458	0/0:14,0:14:27.08:0,27,337
chr10	96503991	.	GT	G	191.53	PASS	AB=0.845;AC=3;AF=0.054;AN=56;BaseQRankSum=1.909;DP=454;FS=2.016;HRun=5;HaplotypeScore=114.8744;InbreedingCoeff=0.0112;MQ=48.20;MQ0=9;MQRankSum=-2.594;QD=2.62;ReadPosRankSum=-0.098;VQSLOD=-0.5489;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:74.66:0,75,923	0/0:8,0:8:9.35:0,9,60	0/1:15,0:6:14.60:15,0,15	0/0:27,1:7:11.06:0,11,112	0/0:25,0:25:44.87:0,45,466	0/0:19,0:19:32.89:0,33,336	0/0:7,0:7:18.06:0,18,239	0/0:23,0:20:33.10:0,33,433	0/0:12,0:13:36.05:0,36,443	0/0:22,0:21:60.11:0,60,746	0/0:16,0:15:36.04:0,36,423	0/0:11,0:12:33.01:0,33,376	0/0:9,0:9:24:0,24,275	0/0:3,0:3:9.01:0,9,99	0/0:6,0:6:3.54:0,4,7	0/0:13,0:13:30.08:0,30,374	0/1:23,10:32:99:141,0,207	0/1:19,4:24:88.88:134,0,89	0/0:21,0:19:54.06:0,54,645	0/0:18,0:15:39.13:0,39,525	0/0:12,0:12:27.09:0,27,368	0/0:9,0:9:26.96:0,27,284	0/0:5,0:5:8.97:0,9,78	0/0:15,0:15:41.86:0,42,440	0/0:19,0:19:16.65:0,17,101	0/0:25,0:25:45.19:0,45,404	0/0:15,0:15:42.14:0,42,573	0/0:11,0:11:33.05:0,33,385
chr10	96503997	.	GT	G	854.74	PASS	AB=0.917;AC=6;AF=0.107;AN=56;BaseQRankSum=-0.993;DP=444;FS=17.065;HRun=5;HaplotypeScore=105.8310;InbreedingCoeff=0.2665;MQ=48.42;MQ0=9;MQRankSum=0.340;QD=8.46;ReadPosRankSum=-0.120;VQSLOD=0.2378;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.19:0,72,946	0/0:9,0:9:15.05:0,15,187	0/0:15,1:7:4.74:0,5,22	0/0:26,0:5:11.63:0,12,127	0/0:25,0:25:34.35:0,34,678	0/0:18,0:18:32.88:0,33,313	0/0:9,0:9:27.09:0,27,350	0/0:20,0:16:27.07:0,27,317	0/0:14,0:14:39.09:0,39,473	0/0:23,0:22:60.10:0,60,737	0/0:15,0:14:36.07:0,36,452	0/0:12,0:12:32.88:0,33,357	0/0:9,0:9:24:0,24,268	0/0:4,0:4:12.04:0,12,152	0/1:5,0:5:2.37:2,0,100	0/0:13,0:13:24.08:0,24,328	0/1:17,17:33:11.40:566,0,11	1/1:13,5:18:35.62:366,36,0	0/0:20,0:19:54.15:0,54,640	0/0:17,0:14:36.10:0,36,410	0/0:12,0:12:27.09:0,27,339	0/0:9,0:9:23.94:0,24,251	0/0:5,0:5:12:0,12,134	0/0:14,0:15:37.37:0,37,487	0/1:19,0:19:15.49:15,0,328	0/1:25,0:25:28.49:28,0,592	0/0:15,0:15:39.12:0,39,477	0/0:7,0:7:21.04:0,21,247
chr10	96504003	.	G	GT	3177.80	PASS	AB=0.831;AC=22;AF=0.393;AN=56;BaseQRankSum=-0.260;DP=450;FS=0.000;HRun=5;HaplotypeScore=95.8567;InbreedingCoeff=0.0861;MQ=48.17;MQ0=8;MQRankSum=-5.429;QD=13.82;ReadPosRankSum=1.609;VQSLOD=2.5096;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.21:0,72,816	0/0:8,0:8:18.05:0,18,203	0/0:17,0:8:18:0,18,182	0/0:27,0:6:14.97:0,15,154	0/0:26,0:26:63.18:0,63,714	0/1:16,3:19:66.40:179,0,66	0/1:9,2:11:48.78:49,0,271	0/1:10,8:14:20.57:295,0,21	0/1:8,6:14:99:236,0,163	0/1:15,7:21:99:174,0,338	0/1:15,2:16:99:130,0,264	0/1:10,4:14:54.98:197,0,55	0/1:8,2:10:72.92:96,0,73	0/1:3,1:4:28.88:29,0,80	0/0:5,0:5:15.04:0,15,170	0/0:11,0:11:27.06:0,27,297	0/0:34,0:33:84.14:0,84,820	0/0:20,0:20:56.35:0,56,587	1/1:10,9:19:24.13:462,24,0	1/1:0,16:13:36.12:491,36,0	1/1:5,8:13:24.08:328,24,0	0/1:8,1:9:53.05:53,0,134	0/1:6,0:6:43.67:44,0,86	0/1:17,2:19:47.15:47,0,377	0/0:20,0:20:48.12:0,48,533	0/0:26,0:26:78.10:0,78,846	1/1:5,9:14:33.10:433,33,0	1/1:2,3:5:9.03:123,9,0
chr10	96504425	.	CGCTCGCTAGGCAAGCGCTCTA	C	10523.45	PASS	AC=30;AF=0.625;AN=48;BaseQRankSum=10.150;DP=351;FS=8.343;HRun=0;HaplotypeScore=163.1700;InbreedingCoeff=0.8172;MQ=46.22;MQ0=9;MQRankSum=-9.972;QD=61.90;ReadPosRankSum=1.386;VQSLOD=4.0775;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:45.15:0,45,4155	0/0:10,0:9:20.94:0,21,1805	0/0:9,0:5:12.01:0,12,370	0/0:15,0:7:3.99:0,4,160	0/0:19,0:19:39.13:0,39,3523	1/1:3,8:8:6.02:337,6,0	./.	./.	1/1:4,7:10:9.03:505,9,0	1/1:7,9:14:24.08:1305,24,0	1/1:7,4:10:6.02:283,6,0	1/1:0,8:7:18.06:1010,18,0	1/1:4,13:14:33.11:1848,33,0	1/1:4,4:7:12.04:673,12,0	0/0:11,0:11:27.09:0,27,2464	0/0:18,0:17:45.15:0,45,3998	1/1:8,8:16:15.05:803,15,0	1/1:2,5:7:6.02:337,6,0	1/1:12,2:12:6.02:337,6,0	1/1:5,9:12:18.06:1001,18,0	1/1:13,0:11:0.47:1,0,0	1/1:2,7:9:24.08:1303,24,0	1/1:3,5:8:12.04:612,12,0	1/1:3,4:7:3.01:168,3,0	0/0:9,0:9:18.06:0,18,1759	0/0:33,0:32:81.28:0,81,6607	./.	./.
chr10	96504660	.	T	TCAGAACGAACG	13053.25	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-7.767;DP=582;FS=2.407;HRun=0;HaplotypeScore=195.7571;InbreedingCoeff=0.9758;MQ=88.88;MQ0=0;MQRankSum=-13.113;QD=115.52;ReadPosRankSum=-4.248;VQSLOD=4.3565;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.26:0,75,2486	0/0:16,0:15:45.14:0,45,1492	0/0:26,0:26:39.85:0,40,1829	0/0:26,0:25:61.50:0,62,1555	0/0:18,0:18:45.15:0,45,1492	0/0:16,0:16:45.15:0,45,1542	0/0:26,0:26:72.23:0,72,2385	1/1:15,8:26:75.20:3175,75,0	0/0:27,0:27:75.26:0,75,2525	0/0:18,0:18:42.14:0,42,1428	0/0:12,0:12:33.09:0,33,1022	0/0:22,0:22:66.21:0,66,2228	0/0:18,0:18:48.16:0,48,1672	0/0:18,0:18:48.16:0,48,1559	0/0:23,0:23:66.23:0,66,2249	0/0:17,0:17:45.15:0,45,1542	0/0:48,0:48:99:0,135,4202	0/0:29,0:29:84.28:0,84,2656	1/1:5,8:15:42.10:1813,42,0	1/1:3,9:13:33.11:1807,33,0	1/1:22,14:38:87.30:3559,87,0	0/0:13,0:13:36.11:0,36,1179	0/0:9,0:9:24.07:0,24,694	0/0:34,0:34:93.30:0,93,3071	0/0:3,0:3:9.03:0,9,315	0/0:24,0:24:72.25:0,72,2456	1/1:4,9:16:42.14:2191,42,0	1/1:0,3:5:9.03:509,9,0
chr10	96505556	.	GAA	G	1672.78	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=2.832;DP=438;FS=1.530;HRun=15;HaplotypeScore=63.7235;InbreedingCoeff=0.8694;MQ=59.09;MQ0=24;MQRankSum=2.100;QD=9.56;ReadPosRankSum=5.977;VQSLOD=1.5099;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,18:25:42.02:442,42,0	1/1:0,0:6:16.47:70,16,0	0/0:16,0:6:11.44:0,11,59	0/0:16,0:10:6.80:0,7,65	1/1:4,0:15:24.40:105,24,0	0/0:17,0:16:35.98:0,36,389	0/0:16,0:16:13.05:0,13,272	0/0:9,0:7:8.94:0,9,78	0/0:11,0:11:33.01:0,33,393	0/0:22,0:24:31.48:0,31,609	0/0:19,0:19:41.41:0,41,467	0/0:14,0:14:27:0,27,293	0/0:10,0:10:23.97:0,24,261	0/0:10,0:10:21.05:0,21,244	1/1:3,0:14:19.18:82,19,0	1/1:3,5:6:14.99:132,15,0	1/1:12,22:35:11.61:419,12,0	1/1:10,13:22:26.79:282,27,0	0/0:12,0:9:3.97:0,4,195	0/0:11,0:12:15.67:0,16,87	0/0:3,0:3:3.44:0,3,21	0/0:5,0:7:8.97:0,9,89	0/0:10,0:11:14.52:0,15,155	0/0:25,0:25:47.35:0,47,515	1/1:4,1:17:27.64:132,28,0	1/1:8,2:23:47.57:215,48,0	0/0:19,0:18:29.16:0,29,239	0/0:6,0:4:2.99:0,3,23
chr10	96505671	.	GA	G	1117.26	PASS	AB=0.846;AC=23;AF=0.411;AN=56;BaseQRankSum=-0.318;DP=389;FS=0.538;HRun=14;HaplotypeScore=57.6978;InbreedingCoeff=0.4964;MQ=53.87;MQ0=13;MQRankSum=4.185;QD=5.20;ReadPosRankSum=3.848;VQSLOD=1.7924;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:19:20.76:0,21,121	0/0:3,0:3:3:0,3,28	0/0:4,0:2:2.99:0,3,24	0/1:6,0:3:14.33:14,0,19	0/1:12,4:16:22.67:23,0,94	1/1:8,13:22:9.88:204,10,0	1/1:14,12:20:4.84:178,5,0	0/0:5,0:10:29.02:0,29,169	0/1:6,2:8:2.84:32,0,3	1/1:3,3:7:10.91:65,11,0	1/1:4,5:8:11.83:82,12,0	1/1:9,5:14:5.68:41,6,0	1/1:5,6:12:10.92:67,11,0	1/1:5,9:15:20.80:144,21,0	0/0:9,2:11:3.35:0,3,153	0/0:9,0:15:13.85:0,14,64	0/1:29,4:34:13.38:13,0,431	0/0:23,1:25:29.22:0,29,409	0/0:12,0:7:8.77:0,9,52	0/0:16,0:15:20.29:0,20,117	0/0:9,0:9:11.72:0,12,73	0/1:7,4:11:41.65:46,0,42	1/1:4,4:8:10.94:68,11,0	1/1:3,19:26:52.76:332,53,0	0/0:12,0:13:15.41:0,15,158	0/0:13,0:13:11.97:0,12,100	0/0:8,0:7:7.06:0,7,39	0/0:11,0:11:17.31:0,17,98
chr10	96505712	.	C	CAT	2098.03	PASS	AB=0.889;AC=20;AF=0.357;AN=56;BaseQRankSum=0.431;DP=447;FS=21.677;HRun=0;HaplotypeScore=93.1616;InbreedingCoeff=0.2701;MQ=57.97;MQ0=14;MQRankSum=-0.144;QD=7.80;ReadPosRankSum=-1.797;VQSLOD=1.4139;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:47.74:0,48,421	0/0:1,0:1:2.97:0,3,20	0/0:23,0:17:27.21:0,27,270	0/0:14,0:9:23.82:0,24,184	0/0:14,0:16:35.72:0,36,288	0/1:21,0:21:21.60:22,0,167	0/1:26,0:26:3.22:3,0,257	1/1:25,0:25:71.88:631,72,0	0/1:3,0:11:33.10:33,0,84	0/0:13,0:13:2.37:0,2,175	0/1:6,0:8:10.58:11,0,56	0/1:14,0:14:23.53:24,0,120	0/0:9,0:10:14.50:0,15,95	0/0:8,0:6:5.83:0,6,45	0/0:6,0:7:17.93:0,18,143	0/0:8,0:10:10.64:0,11,274	0/1:28,0:28:41.35:41,0,205	0/0:21,0:21:4.21:0,4,176	1/1:2,22:23:65.90:625,66,0	1/1:3,11:14:7.03:163,7,0	1/1:10,27:36:5.53:270,6,0	0/1:13,0:13:17.89:18,0,116	0/0:7,0:8:11.64:0,12,83	0/1:20,0:21:19.35:19,0,151	0/0:8,0:9:17.31:0,17,124	0/0:7,0:7:20.66:0,21,159	1/1:3,8:10:17.72:248,18,0	1/1:2,7:7:9.03:170,9,0
chr10	96505941	.	AAATTTGGGTAGAAGGTT	A	6789.80	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.923;DP=627;FS=0.000;HRun=0;HaplotypeScore=280.7290;InbreedingCoeff=0.9860;MQ=90.01;MQ0=0;MQRankSum=-7.884;QD=73.01;ReadPosRankSum=-1.720;VQSLOD=3.7599;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,135,9438	0/0:13,0:13:39.12:0,39,3022	0/0:23,0:23:60.20:0,60,3449	0/0:28,0:28:84.29:0,84,5333	0/0:18,0:18:48.12:0,48,3524	0/0:25,0:25:72.25:0,72,5421	0/0:38,0:38:99:0,114,8297	1/1:8,15:23:45.09:1457,45,0	0/0:17,0:17:48.16:0,48,3815	0/0:25,0:25:75.26:0,75,5550	0/0:25,0:25:69.24:0,69,5260	0/0:32,0:32:93.28:0,93,6671	0/0:25,0:25:75.26:0,75,5815	0/0:14,0:14:39.13:0,39,3259	0/0:24,0:24:69.24:0,69,5550	0/0:24,0:24:72.24:0,72,4795	0/0:28,0:28:78.27:0,78,5433	0/0:15,0:15:45.15:0,45,3625	1/1:7,8:15:24.07:757,24,0	1/1:2,11:12:18.06:817,18,0	1/1:3,16:19:39.13:1674,39,0	0/0:22,0:22:63.22:0,63,4913	0/0:19,0:19:51.18:0,51,3819	0/0:29,0:29:87.28:0,87,6490	0/0:15,0:15:45.15:0,45,3173	0/0:27,0:27:78.27:0,78,6103	1/1:5,14:18:33.11:1638,33,0	1/1:0,4:4:9.03:447,9,0
chr10	96506565	.	AAG	A	429.66	PASS	AB=0.871;AC=7;AF=0.125;AN=56;BaseQRankSum=8.476;DP=595;FS=17.661;HRun=0;HaplotypeScore=121.7889;InbreedingCoeff=-0.1425;MQ=55.74;MQ0=5;MQRankSum=-7.447;QD=2.47;ReadPosRankSum=-3.457;VQSLOD=0.3187;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:34:0,34,630	0/0:12,0:12:33.11:0,33,636	0/0:34,0:11:24.44:0,24,393	0/0:22,0:9:21.52:0,22,272	0/0:26,0:26:78.27:0,78,1502	0/0:18,0:18:54.18:0,54,977	0/0:18,1:19:51.17:0,51,984	0/0:21,1:22:57.19:0,57,1038	0/0:22,0:21:35.95:0,36,649	0/0:24,0:23:66.23:0,66,1258	0/0:13,0:13:33.11:0,33,634	0/0:18,0:18:33.10:0,33,603	0/0:18,0:18:54.18:0,54,990	0/0:13,0:13:18.06:0,18,346	0/0:15,0:15:45.15:0,45,840	0/0:16,0:11:24.08:0,24,457	0/1:31,0:31:47.45:47,0,1283	0/1:28,0:28:15.28:15,0,852	0/1:27,2:29:16.92:17,0,1358	0/1:20,10:30:99:232,0,1016	0/1:9,6:14:49.72:50,0,459	0/0:19,0:19:51.17:0,51,937	0/0:13,0:13:39.12:0,39,719	0/0:29,0:30:67.31:0,67,1369	0/0:19,0:19:57.20:0,57,1096	0/0:20,0:20:60.20:0,60,1095	0/1:22,4:26:99:119,0,1138	0/1:12,3:15:79.43:79,0,593
chr10	96506579	.	G	GAAGA	7405.02	PASS	AB=1.000;AC=40;AF=0.741;AN=54;BaseQRankSum=4.568;DP=614;FS=9.020;HRun=0;HaplotypeScore=132.8135;InbreedingCoeff=0.7504;MQ=54.58;MQ0=5;MQRankSum=-4.537;QD=15.49;ReadPosRankSum=-2.854;VQSLOD=3.6317;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:29:34.43:34,0,55	0/0:11,0:11:30.10:0,30,481	./.	0/0:19,0:8:8.88:0,9,61	0/0:25,0:25:57.15:0,57,825	1/1:12,3:14:27.08:532,27,0	1/1:23,0:23:27.48:412,27,0	1/1:33,0:31:23.06:165,23,0	1/1:9,17:26:24.08:528,24,0	1/1:9,18:26:54.17:1103,54,0	1/1:4,8:12:23.95:299,24,0	1/1:5,12:17:9.03:216,9,0	1/1:20,2:21:45:860,45,0	1/1:3,11:13:6.02:150,6,0	0/0:16,0:16:33.09:0,33,479	0/1:1,0:10:2.65:3,0,86	1/1:33,0:34:46.26:427,46,0	1/1:27,0:27:41.63:395,42,0	1/1:29,0:26:16.40:146,16,0	1/1:28,0:28:35.55:273,36,0	1/1:17,0:16:1.47:67,1,0	1/1:6,10:16:27.09:507,27,0	1/1:8,6:15:10.28:219,10,0	1/1:27,5:32:51.37:715,51,0	0/0:22,0:22:57.14:0,57,805	0/0:15,0:15:11.22:0,11,481	1/1:26,0:26:25.20:192,25,0	1/1:17,0:17:17.39:161,17,0
chr10	96506619	.	A	AAAGC	5240.48	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=0.798;DP=563;FS=2.874;HRun=0;HaplotypeScore=153.0288;InbreedingCoeff=0.9755;MQ=49.81;MQ0=6;MQRankSum=-0.862;QD=26.87;ReadPosRankSum=0.004;VQSLOD=4.8548;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:50.95:0,51,636	0/0:11,0:11:21.06:0,21,327	0/0:23,0:9:8.47:0,8,135	0/0:20,0:15:27.57:0,28,315	0/0:21,0:21:20.99:0,21,286	1/1:6,7:12:8.80:60,9,0	1/1:15,0:15:21.07:475,21,0	0/0:28,0:26:30.05:0,30,382	1/1:21,5:25:40.17:896,40,0	1/1:20,4:23:40.50:751,40,0	1/1:12,0:12:17.94:283,18,0	1/1:13,3:15:21.03:353,21,0	1/1:16,3:18:29.28:613,29,0	1/1:15,3:15:26.91:434,27,0	0/0:15,0:15:36.10:0,36,553	0/0:19,0:14:27.07:0,27,398	0/0:29,0:29:46.87:0,47,667	0/0:31,0:31:56.56:0,57,762	0/0:24,0:23:33.01:0,33,385	0/0:27,0:27:33.04:0,33,468	0/0:20,0:18:36.06:0,36,495	1/1:12,2:13:20.84:350,21,0	1/1:10,0:10:20.99:237,21,0	1/1:23,4:28:42.44:788,42,0	0/0:23,0:23:54.15:0,54,823	0/0:14,0:14:24.08:0,24,377	0/0:20,0:20:20.39:0,20,250	0/0:16,0:16:30.04:0,30,408
chr10	96506911	.	T	TTTTG	16112.74	PASS	AB=0.644;AC=34;AF=0.607;AN=56;BaseQRankSum=-12.439;DP=644;FS=3.785;HRun=0;HaplotypeScore=106.1202;InbreedingCoeff=0.8498;MQ=67.56;MQ0=1;MQRankSum=0.241;QD=39.30;ReadPosRankSum=0.643;VQSLOD=5.2131;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:8,15:25:6.40:816,0,6	1/1:4,8:13:21.07:504,21,0	0/0:25,0:19:18.01:0,18,236	0/0:20,0:18:17.77:0,18,263	1/1:11,12:23:39.13:924,39,0	1/1:9,15:25:45.15:1072,45,0	1/1:9,15:23:30.10:722,30,0	0/0:36,0:35:20.16:0,20,459	1/1:12,12:26:39.13:924,39,0	1/1:7,23:30:69.11:1412,69,0	1/1:7,10:18:30.10:694,30,0	1/1:7,15:21:39.13:938,39,0	1/1:6,12:18:36.12:867,36,0	1/1:8,9:18:27.09:642,27,0	1/1:8,18:25:45.15:1080,45,0	1/1:3,10:15:30.10:722,30,0	0/0:34,0:34:81.23:0,81,1223	0/0:19,0:19:33.11:0,33,531	0/0:22,0:19:17.52:0,18,281	0/0:19,0:19:9.02:0,9,108	0/0:21,0:21:24.20:0,24,483	0/1:10,8:18:18.23:585,0,18	1/1:5,11:17:36.12:861,36,0	1/1:5,24:31:54.19:1300,54,0	1/1:10,16:26:36.12:866,36,0	1/1:18,15:32:50.30:1186,50,0	0/0:19,0:19:39.12:0,39,460	0/0:19,0:19:22.11:0,22,379
chr10	96507300	.	G	GT	4108.22	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.430;DP=559;FS=8.436;HRun=1;HaplotypeScore=53.9738;InbreedingCoeff=0.9967;MQ=90.28;MQ0=0;MQRankSum=1.815;QD=39.89;ReadPosRankSum=-2.061;VQSLOD=2.9884;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:93.18:0,93,1144	0/0:11,0:11:33.11:0,33,421	0/0:23,0:23:66.12:0,66,750	0/0:23,0:23:66.15:0,66,786	0/0:34,0:34:96.30:0,96,1232	0/0:19,0:19:51.16:0,51,660	0/0:15,0:15:45.15:0,45,584	1/1:1,19:20:54.16:766,54,0	0/0:23,0:23:69.22:0,69,895	0/0:26,0:26:75.71:0,76,962	0/0:14,0:14:39.10:0,39,477	0/0:17,0:17:51.17:0,51,661	0/0:21,0:21:60.17:0,60,750	0/0:17,0:17:51.12:0,51,642	0/0:19,0:19:57.19:0,57,738	0/0:19,0:19:51.13:0,51,629	0/0:19,0:19:54.12:0,54,666	0/0:27,0:27:81.26:0,81,1051	1/1:0,20:20:60.17:840,60,0	1/1:1,17:18:45.07:617,45,0	1/1:1,14:15:42.14:629,42,0	0/0:18,0:18:54.18:0,54,700	0/0:22,0:22:66.20:0,66,841	0/0:14,0:14:39.11:0,39,489	0/0:16,0:16:48.13:0,48,596	0/0:27,0:27:75.22:0,75,930	1/1:0,25:25:69.23:1031,69,0	1/1:0,5:5:15.05:225,15,0
chr10	96507758	.	GATA	G	8401.85	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=5.725;DP=348;FS=8.136;HRun=0;HaplotypeScore=93.4900;InbreedingCoeff=0.9343;MQ=63.07;MQ0=0;MQRankSum=-6.476;QD=35.60;ReadPosRankSum=0.427;VQSLOD=4.9708;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.25:0,81,1642	0/0:2,0:2:6.02:0,6,134	0/0:5,0:5:6:0,6,61	0/0:9,0:8:14.54:0,15,201	0/0:22,0:22:54.19:0,54,1166	1/1:1,4:5:12.04:195,12,0	1/1:1,9:10:24.08:387,24,0	1/1:5,22:27:78.26:1245,78,0	1/1:0,9:9:21.07:339,21,0	1/1:0,14:14:38.89:636,39,0	1/1:4,6:10:15.05:241,15,0	1/1:1,7:8:15.05:245,15,0	1/1:0,8:8:24.08:376,24,0	1/1:5,11:16:21.07:342,21,0	0/0:5,0:5:9.03:0,9,201	0/0:10,0:10:27.09:0,27,567	1/1:5,16:20:51.11:777,51,0	1/1:8,7:15:24.08:388,24,0	1/1:4,5:9:21.07:336,21,0	1/1:3,10:13:27.09:432,27,0	1/1:4,7:11:27.09:439,27,0	1/1:1,9:10:18.06:294,18,0	1/1:3,12:15:27.09:440,27,0	1/1:1,11:11:20.69:314,21,0	0/0:10,0:10:24.08:0,24,527	0/0:18,0:18:51.16:0,51,1081	1/1:1,16:16:48.16:781,48,0	1/1:3,3:6:12.04:196,12,0
chr10	96507761	.	A	AG	1001.84	PASS	AB=0.962;AC=17;AF=0.304;AN=56;BaseQRankSum=1.504;DP=343;FS=49.329;HRun=0;HaplotypeScore=110.3978;InbreedingCoeff=-0.1043;MQ=65.48;MQ0=0;MQRankSum=-6.957;QD=4.91;ReadPosRankSum=-6.486;VQSLOD=0.7581;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.26:0,84,1155	0/0:2,0:2:6.02:0,6,84	0/0:7,0:6:7.72:0,8,42	0/0:12,0:9:17.94:0,18,202	0/0:21,0:21:54.18:0,54,754	0/1:4,1:5:2.94:22,0,3	0/1:9,0:9:0.68:86,0,1	0/1:27,0:27:17.90:84,0,18	0/1:9,0:9:2.11:63,0,2	0/1:15,0:15:7.32:65,0,7	0/1:9,1:10:62.60:80,0,63	0/1:8,0:8:13.95:14,0,36	1/1:8,0:8:5.01:70,5,0	0/1:14,0:14:33.37:33,0,79	0/0:4,0:4:9.03:0,9,126	0/0:10,0:10:27.09:0,27,378	0/1:20,1:20:8.97:86,0,9	0/1:13,1:14:45.76:52,0,46	0/1:6,2:8:15.56:82,0,16	0/1:12,0:12:26.93:104,0,27	0/1:11,0:11:8.79:71,0,9	0/0:10,0:10:16.38:0,16,79	0/1:15,0:15:63.30:85,0,63	0/0:11,0:10:7.18:0,7,18	0/0:10,0:10:24.08:0,24,336	0/0:17,0:17:51.17:0,51,714	0/1:18,0:16:2.88:162,0,3	0/0:6,0:6:8.84:0,9,37
chr10	96507778	.	AT	A	2254.42	PASS	AB=0.903;AC=23;AF=0.411;AN=56;BaseQRankSum=-0.595;DP=380;FS=22.407;HRun=10;HaplotypeScore=118.9961;InbreedingCoeff=0.8800;MQ=75.46;MQ0=1;MQRankSum=-4.667;QD=14.27;ReadPosRankSum=0.176;VQSLOD=2.1443;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:58.15:0,58,658	1/1:1,2:3:8.99:76,9,0	0/1:24,1:16:1.26:1,0,79	0/0:38,0:21:2.86:0,3,127	1/1:5,14:20:46.88:382,47,0	0/0:8,0:8:23.97:0,24,242	0/0:8,0:8:15:0,15,152	1/1:12,14:26:47.88:402,48,0	0/0:10,0:10:24:0,24,242	0/0:13,0:13:23.80:0,24,242	0/0:12,0:12:33.09:0,33,365	0/0:10,0:10:15.04:0,15,166	0/0:9,0:9:19.80:0,20,189	0/0:11,0:11:24.06:0,24,258	1/1:0,5:5:15:130,15,0	0/0:9,0:9:12:0,12,117	0/0:21,0:21:21.50:0,21,346	0/0:10,0:10:27.07:0,27,298	1/1:3,4:9:18.14:137,18,0	1/1:1,10:11:29.92:252,30,0	1/1:3,5:8:17.77:131,18,0	0/0:8,0:8:15.04:0,15,166	0/0:14,1:15:7.06:0,7,306	0/0:10,0:9:24.01:0,24,244	1/1:0,8:8:24:210,24,0	1/1:2,14:16:11.75:319,12,0	1/1:5,15:19:39.93:361,40,0	1/1:1,3:4:8.90:68,9,0
chr10	96507799	.	CA	C	1178.32	PASS	AB=0.714;AC=26;AF=0.464;AN=56;BaseQRankSum=-3.303;DP=481;FS=2.123;HRun=15;HaplotypeScore=133.0329;InbreedingCoeff=0.7109;MQ=68.71;MQ0=5;MQRankSum=1.535;QD=5.41;ReadPosRankSum=4.039;VQSLOD=2.3153;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,2:33:37.96:0,38,443	0/0:3,0:7:13.68:0,14,54	0/0:53,0:21:28.41:0,28,205	0/1:56,1:27:11.24:11,0,88	0/0:18,0:29:59.37:0,59,300	0/1:4,6:10:2.90:111,0,3	1/1:3,3:6:8.83:58,9,0	0/0:13,0:18:37.71:0,38,225	1/1:5,3:9:16.25:91,16,0	1/1:6,5:13:21.68:126,22,0	0/1:4,16:20:2.41:237,0,2	1/1:7,4:12:3.90:87,4,0	1/1:7,6:13:12.36:124,12,0	1/1:8,4:12:7.58:73,8,0	0/0:4,0:14:22.73:0,23,114	0/1:4,4:9:1.52:2,0,92	1/1:4,0:21:29.86:85,30,0	1/1:2,0:9:14.25:41,14,0	0/0:8,0:14:25.88:0,26,152	0/0:10,1:17:21.48:0,21,212	0/0:7,0:11:21.50:0,21,148	1/1:1,2:4:7.94:44,8,0	1/1:4,11:16:37.49:236,37,0	1/1:2,4:5:8.85:58,9,0	0/0:5,0:17:28.51:0,29,138	0/0:14,0:20:41.38:0,41,216	0/0:7,1:22:41.15:0,41,292	0/0:3,0:4:5.82:0,6,35
chr10	96507825	.	C	CA	2507.42	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-5.125;DP=477;FS=0.994;HRun=7;HaplotypeScore=96.2693;InbreedingCoeff=0.8600;MQ=68.04;MQ0=6;MQRankSum=-0.571;QD=15.67;ReadPosRankSum=-1.752;VQSLOD=3.3064;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:68.91:0,69,649	0/0:10,0:10:16.28:0,16,207	0/0:38,0:16:28.17:0,28,177	0/1:49,0:20:17.84:18,0,76	0/0:28,0:28:47.90:0,48,457	0/0:11,0:11:30.05:0,30,288	0/0:8,0:8:15.01:0,15,139	1/1:7,22:28:66.20:797,66,0	0/0:10,0:10:30.03:0,30,281	0/0:17,0:17:39.03:0,39,367	0/0:28,0:28:75.09:0,75,711	0/0:10,0:10:21.02:0,21,202	0/0:12,0:12:30.02:0,30,279	0/0:9,0:9:27.04:0,27,258	0/0:12,0:12:12.54:0,13,164	0/0:9,0:9:14.91:0,15,142	0/0:21,0:20:57.07:0,57,543	0/0:7,0:7:17.98:0,18,164	1/1:13,7:20:32.95:366,33,0	1/1:4,12:16:33.10:398,33,0	1/1:2,8:10:24.07:287,24,0	0/0:3,0:3:6.01:0,6,58	0/0:17,0:17:42.04:0,42,395	0/0:5,0:4:12.02:0,12,116	0/0:17,0:17:28.45:0,28,235	0/0:17,0:17:27.01:0,27,257	1/1:10,17:26:48.15:576,48,0	1/1:1,8:9:21.06:254,21,0
chr10	96511415	.	G	GT	2274.30	PASS	AB=0.753;AC=34;AF=0.607;AN=56;BaseQRankSum=2.129;DP=417;FS=7.875;HRun=13;HaplotypeScore=62.5006;InbreedingCoeff=0.1969;MQ=61.34;MQ0=3;MQRankSum=-1.755;QD=7.31;ReadPosRankSum=0.293;VQSLOD=2.0326;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,2:36:30.77:0,31,457	0/0:5,0:5:5.87:0,6,41	0/0:16,0:8:3.52:0,4,38	0/1:21,1:13:41.99:42,0,45	0/1:16,1:17:3.24:3,0,105	0/1:3,6:9:11.53:47,0,12	1/1:1,13:14:33.04:306,33,0	1/1:8,1:21:44.52:267,45,0	0/1:6,6:13:13.90:102,0,14	1/1:2,13:16:15.28:263,15,0	1/1:7,11:18:0.43:138,0,0	0/1:5,9:15:14.52:123,0,15	1/1:3,5:10:20.54:154,21,0	1/1:1,6:7:11.99:111,12,0	0/0:14,0:14:35.64:0,36,243	0/1:12,4:16:78.62:79,0,109	0/1:24,2:26:32.88:33,0,236	0/1:17,4:22:34.34:34,0,211	1/1:4,2:11:23.33:157,23,0	1/1:6,1:10:11.77:81,12,0	1/1:4,0:12:3.69:27,4,0	0/1:2,6:8:8.58:109,0,9	0/1:6,7:14:0.46:131,0,0	1/1:1,12:13:17.98:160,18,0	0/0:16,0:17:14.44:0,14,178	0/0:16,1:17:13.74:0,14,235	1/1:1,0:3:5.68:29,6,0	1/1:5,0:11:11.36:58,11,0
chr10	96512256	.	A	AACCACACATT	3200.65	PASS	AB=0.803;AC=40;AF=0.952;AN=42;BaseQRankSum=-2.593;DP=74;FS=13.582;HRun=0;HaplotypeScore=27.6653;InbreedingCoeff=-0.1667;MQ=62.97;MQ0=0;MQRankSum=0.620;QD=43.84;ReadPosRankSum=-1.193;VQSLOD=1.2233;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:3.01:86,3,0	./.	0/1:8,0:7:6.27:415,0,6	0/1:7,1:12:50.14:688,0,50	1/1:2,0:2:3.01:75,3,0	1/1:2,0:2:6.02:136,6,0	1/1:3,0:3:8.99:151,9,0	1/1:4,0:4:9.02:164,9,0	./.	1/1:4,0:4:9.49:209,9,0	./.	1/1:1,0:1:3.01:57,3,0	1/1:3,0:3:8.97:101,9,0	1/1:2,0:2:5.98:79,6,0	1/1:2,0:2:3:25,3,0	1/1:5,0:5:12.03:238,12,0	1/1:2,0:2:3:25,3,0	./.	1/1:1,0:1:3.01:42,3,0	./.	1/1:8,0:8:12.03:240,12,0	./.	1/1:1,0:1:3.01:50,3,0	1/1:5,0:5:6.02:117,6,0	1/1:1,0:1:2.99:23,3,0	./.	1/1:1,0:1:3.01:107,3,0	1/1:3,0:3:9.03:265,9,0
chr10	96555257	.	TTTTC	T	1879.82	PASS	AB=0.938;AC=34;AF=0.607;AN=56;BaseQRankSum=-2.821;DP=233;FS=55.880;HRun=0;HaplotypeScore=51.0844;InbreedingCoeff=-0.1699;MQ=46.26;MQ0=15;MQRankSum=1.916;QD=9.08;ReadPosRankSum=1.843;VQSLOD=-0.0714;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,1:11:12.42:119,0,12	0/1:3,0:3:16.70:17,0,44	0/0:16,0:6:13.11:0,13,131	0/1:11,0:8:3.12:3,0,89	0/1:15,0:15:26.63:168,0,27	0/1:9,0:9:12.73:101,0,13	1/1:1,6:8:2.72:46,3,0	0/0:5,0:5:9.39:0,9,58	1/1:7,0:7:8.52:77,9,0	1/1:3,2:5:8.71:100,9,0	1/1:5,0:4:12.03:133,12,0	0/0:2,0:2:2.94:0,3,18	1/1:5,0:4:5.51:43,6,0	0/0:2,0:2:0:0,0,0	0/1:11,1:11:8.53:189,0,9	1/1:4,0:4:3.42:59,3,0	0/1:12,1:12:29.27:118,0,29	0/1:13,1:13:18.85:124,0,19	0/1:5,1:6:24.53:56,0,25	0/1:15,1:13:5.52:131,0,6	1/1:6,0:3:3.57:40,4,0	1/1:4,0:4:5.73:53,6,0	0/1:2,1:3:11.93:40,0,12	1/1:8,0:8:14.55:103,15,0	0/1:6,1:7:51.67:107,0,52	0/1:7,0:7:14.57:15,0,42	0/1:16,0:13:52.14:52,0,70	1/1:10,0:9:20.47:147,20,0
chr10	96555258	.	TTTC	T	2320.74	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=-2.334;DP=193;FS=9.783;HRun=0;HaplotypeScore=35.0568;InbreedingCoeff=0.2877;MQ=48.98;MQ0=14;MQRankSum=0.757;QD=13.04;ReadPosRankSum=0.821;VQSLOD=1.6865;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:8:17.41:129,17,0	0/1:3,0:3:11.44:20,0,11	0/0:12,0:6:11.42:0,11,81	0/1:9,0:7:2.63:3,0,43	1/1:15,0:15:28.99:240,29,0	1/1:7,0:7:17.79:124,18,0	1/1:7,0:7:3:32,3,0	0/1:5,0:5:2.76:10,0,3	1/1:6,0:6:12:103,12,0	1/1:4,0:4:8.97:81,9,0	1/1:6,0:5:15.02:143,15,0	0/0:1,0:1:0:0,0,0	1/1:5,0:4:8.94:69,9,0	0/0:1,0:1:0:0,0,0	1/1:12,1:12:26.56:251,27,0	1/1:3,0:3:4.73:55,5,0	1/1:8,1:10:20.37:149,20,0	1/1:12,0:11:16.28:156,16,0	1/1:3,1:4:5.79:53,6,0	1/1:15,0:12:18.76:148,19,0	1/1:5,0:2:5.94:43,6,0	1/1:3,0:3:6:53,6,0	1/1:3,0:3:9.01:83,9,0	1/1:5,0:5:14.82:104,15,0	0/1:7,0:7:4.94:93,0,5	1/1:3,0:3:5.80:53,6,0	1/1:9,0:7:8.38:75,8,0	1/1:8,1:8:22.71:174,23,0
chr10	96555510	.	C	CA	4381.25	PASS	AB=0.913;AC=23;AF=0.411;AN=56;BaseQRankSum=4.578;DP=531;FS=7.516;HRun=8;HaplotypeScore=67.2079;InbreedingCoeff=0.8998;MQ=65.31;MQ0=4;MQRankSum=-6.521;QD=25.04;ReadPosRankSum=-1.486;VQSLOD=5.0238;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,1114	0/0:9,0:9:21:0,21,192	0/0:15,0:11:2.20:0,2,187	0/0:24,0:22:10.86:0,11,251	0/0:37,0:37:79.65:0,80,828	1/1:3,12:15:42.11:474,42,0	1/1:8,8:16:30.08:340,30,0	0/0:23,0:23:53.44:0,53,493	1/1:6,11:16:39.07:426,39,0	1/1:1,16:18:45.13:512,45,0	1/1:2,12:14:36.11:416,36,0	1/1:1,8:9:24.07:277,24,0	1/1:4,10:14:39.10:430,39,0	1/1:4,15:19:48.14:553,48,0	0/0:24,0:24:63.03:0,63,576	0/0:13,0:13:36.01:0,36,329	0/0:38,0:38:96.03:0,96,878	0/0:28,0:27:75.03:0,75,686	0/0:20,0:20:54.03:0,54,494	0/0:18,0:18:45.01:0,45,409	0/0:15,0:15:35.98:0,36,319	1/1:2,7:9:24.06:265,24,0	1/1:0,11:10:30.09:346,30,0	1/1:3,9:12:30.07:334,30,0	0/0:17,0:17:45.02:0,45,408	0/1:19,2:21:9.14:9,0,431	0/0:21,0:20:60.03:0,60,549	0/0:10,0:10:30.02:0,30,275
chr10	96555536	.	C	CA	4016.68	PASS	AB=0.923;AC=23;AF=0.411;AN=56;BaseQRankSum=5.358;DP=585;FS=2.733;HRun=8;HaplotypeScore=72.4552;InbreedingCoeff=0.9092;MQ=64.41;MQ0=2;MQRankSum=-7.479;QD=21.25;ReadPosRankSum=0.572;VQSLOD=3.8122;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:41:99:0,113,1005	0/0:11,0:11:33.02:0,33,302	0/0:27,0:20:39.06:0,39,357	0/0:26,0:25:61.76:0,62,506	0/0:39,1:40:67.91:0,68,865	1/1:5,13:18:39.11:446,39,0	1/1:1,13:14:36.11:415,36,0	0/0:32,0:32:77.94:0,78,685	1/1:4,8:11:21.05:234,21,0	1/1:6,17:23:48.09:523,48,0	1/1:5,13:18:42.12:476,42,0	1/1:1,5:6:18.04:198,18,0	1/1:6,11:17:5.72:309,6,0	1/1:6,14:20:14.63:404,15,0	0/0:22,0:22:57.02:0,57,518	0/0:16,0:16:44.96:0,45,399	0/0:37,0:37:99:0,102,918	0/0:30,0:30:55.52:0,56,682	0/0:23,0:23:62.97:0,63,564	0/0:22,0:22:57.02:0,57,521	0/0:9,0:9:24.01:0,24,220	1/1:1,8:10:20.98:213,21,0	1/1:3,12:14:36.10:407,36,0	1/1:1,11:12:33.10:381,33,0	0/0:18,0:18:51.03:0,51,466	0/1:22,2:24:12.22:12,0,393	0/0:21,0:20:51:0,51,463	0/0:21,0:21:63.03:0,63,576
chr10	96557119	.	ACG	A	1341.03	PASS	AB=0.989;AC=27;AF=0.482;AN=56;BaseQRankSum=-1.478;DP=582;FS=6.931;HRun=0;HaplotypeScore=171.5483;InbreedingCoeff=-0.3766;MQ=47.46;MQ0=11;MQRankSum=0.708;QD=2.84;ReadPosRankSum=-4.665;VQSLOD=0.2891;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,4:42:50.04:50,0,99	0/1:12,0:12:3.62:17,0,4	0/0:36,0:16:27.74:0,28,487	0/0:26,1:17:34.96:0,35,515	1/1:25,0:25:11.82:178,12,0	0/1:25,0:24:76.01:76,0,118	0/1:29,0:27:45.06:45,0,169	0/1:32,0:31:20.59:21,0,271	0/1:14,0:14:35.56:48,0,36	0/1:21,0:20:74.25:74,0,182	0/0:8,0:8:8.59:0,9,43	0/1:21,0:19:50.01:50,0,72	0/1:13,1:13:6.41:42,0,6	0/1:14,0:14:13.53:35,0,14	1/1:19,0:20:16.70:110,17,0	0/1:11,0:11:21.38:21,0,44	1/1:17,0:16:4.82:108,5,0	0/1:19,0:19:99:103,0,105	0/1:18,0:16:42.98:43,0,132	0/0:25,0:25:2.79:0,3,135	0/1:22,0:20:33.36:33,0,89	0/1:20,0:18:14.05:14,0,53	0/1:16,0:16:3.15:3,0,137	0/1:20,0:19:40.29:56,0,40	1/1:20,0:20:3.70:87,4,0	0/1:25,0:25:31.78:249,0,32	0/0:12,0:12:10.87:0,11,75	0/1:15,0:14:39.21:39,0,112
chr10	96557121	.	G	GCACA	4600.55	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=2.336;DP=583;FS=1.699;HRun=0;HaplotypeScore=176.7537;InbreedingCoeff=0.3934;MQ=46.32;MQ0=12;MQRankSum=0.184;QD=8.86;ReadPosRankSum=-0.407;VQSLOD=4.1179;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,33:44:18.51:355,19,0	1/1:12,0:12:8.40:193,8,0	0/0:36,0:13:26.62:0,27,340	0/0:26,0:15:19.91:0,20,312	1/1:24,0:24:9.44:73,9,0	1/1:26,0:25:21.03:278,21,0	1/1:31,0:28:30.20:381,30,0	1/1:31,0:30:16.20:194,16,0	1/1:12,1:13:18.12:237,18,0	1/1:20,0:19:39.63:448,40,0	1/1:7,0:7:9:99,9,0	1/1:19,0:17:24.20:290,24,0	0/1:14,0:13:8.13:126,0,8	1/1:14,0:14:9.35:121,9,0	1/1:22,0:22:14.44:137,14,0	1/1:1,10:13:9.03:205,9,0	0/1:17,0:16:3.75:39,0,4	0/1:19,0:19:75.94:86,0,76	1/1:18,0:16:27.87:152,28,0	1/1:24,0:24:7.47:63,7,0	1/1:25,0:23:16.67:131,17,0	1/1:20,0:18:9:128,9,0	1/1:16,0:16:20.97:262,21,0	1/1:19,0:19:16.56:205,17,0	1/1:20,0:20:12.37:90,12,0	1/1:24,0:24:4.34:169,4,0	1/1:11,0:11:9.08:90,9,0	1/1:15,0:14:4.21:47,4,0
chr10	96557123	.	ACG	A	3446.85	PASS	AB=0.993;AC=43;AF=0.768;AN=56;BaseQRankSum=-3.713;DP=587;FS=5.807;HRun=0;HaplotypeScore=164.5370;InbreedingCoeff=0.0741;MQ=44.87;MQ0=12;MQRankSum=5.117;QD=6.60;ReadPosRankSum=-6.049;VQSLOD=1.1964;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:42,3:45:15.88:100,0,16	0/1:12,0:12:3.03:18,0,3	0/0:40,0:15:25.45:0,25,286	0/0:25,0:13:16.29:0,16,249	1/1:24,0:24:13.65:180,14,0	1/1:26,0:25:13.27:147,13,0	1/1:30,0:27:10.85:183,11,0	0/1:32,0:31:56.82:360,0,57	1/1:13,1:14:6.22:104,6,0	1/1:22,0:21:8.56:263,9,0	1/1:7,0:7:8.77:74,9,0	1/1:19,0:17:15.21:208,15,0	0/1:14,0:13:6.82:53,0,7	1/1:14,0:14:7.08:43,7,0	1/1:22,0:22:16.73:115,17,0	0/1:13,0:13:9.22:22,0,9	1/1:17,0:16:6.85:119,7,0	0/1:19,0:19:99:105,0,104	0/1:18,0:16:6.32:158,0,6	1/1:23,0:23:26.66:198,27,0	1/1:26,0:24:6.25:127,6,0	1/1:20,0:18:6.47:52,6,0	1/1:15,0:15:10.63:108,11,0	1/1:20,0:19:15.78:124,16,0	1/1:21,0:21:6.28:111,6,0	0/1:25,0:25:26.41:280,0,26	1/1:11,0:11:11.62:80,12,0	0/1:13,0:12:0.91:115,0,1
chr10	96557127	.	A	ACG	578.44	PASS	AB=0.954;AC=16;AF=0.286;AN=56;BaseQRankSum=2.229;DP=593;FS=1.231;HRun=0;HaplotypeScore=176.3226;InbreedingCoeff=-0.2530;MQ=44.95;MQ0=11;MQRankSum=0.570;QD=2.01;ReadPosRankSum=1.341;VQSLOD=2.4132;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:42:20.18:20,0,61	0/1:11,0:11:2.65:3,0,39	0/0:42,0:16:41.85:0,42,445	0/0:26,0:13:33:0,33,391	0/0:24,0:24:28.24:0,28,219	0/1:26,0:25:63.18:63,0,144	0/1:28,0:25:86.67:130,0,87	0/0:33,0:32:66.94:0,67,520	0/1:15,0:15:36.91:40,0,37	0/1:22,0:21:95.77:98,0,96	1/1:5,0:5:3:25,3,0	0/1:17,0:15:71.41:71,0,75	0/1:17,0:16:9.77:10,0,92	0/1:8,6:15:23.18:23,0,40	0/1:22,0:22:15.76:16,0,77	0/1:14,0:14:39.12:44,0,39	0/0:18,0:17:23.09:0,23,137	0/0:19,0:19:38.37:0,38,280	0/0:20,0:18:40.90:0,41,267	0/0:25,0:25:24.37:0,24,194	0/0:27,0:25:11.67:0,12,103	0/1:10,9:17:38.03:44,0,38	0/1:15,0:15:13.87:81,0,14	0/1:20,0:19:38.35:66,0,38	0/0:23,0:23:9.71:0,10,141	0/0:23,0:23:55.88:0,56,456	0/0:11,0:11:20.46:0,20,139	0/0:14,0:13:26.25:0,26,191
chr10	96558013	.	T	TGG	919.66	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=8.320;DP=409;FS=15.510;HRun=7;HaplotypeScore=65.6824;InbreedingCoeff=0.9431;MQ=85.08;MQ0=2;MQRankSum=-4.136;QD=7.48;ReadPosRankSum=-0.073;VQSLOD=-0.4123;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,7:10:12.04:197,12,0	0/0:6,0:6:18.05:0,18,210	0/0:38,0:28:27.91:0,28,435	0/0:36,0:19:5.95:0,6,225	0/0:20,0:20:39.11:0,39,453	1/1:2,0:16:24.50:87,25,0	1/1:1,0:10:17.47:62,17,0	0/0:31,0:31:72.16:0,72,813	1/1:0,0:8:14.97:53,15,0	1/1:3,0:17:32.44:114,32,0	1/1:0,0:11:17.47:62,17,0	1/1:0,0:7:17.47:61,17,0	1/1:1,0:7:9.98:35,10,0	1/1:0,0:9:22.46:79,22,0	0/0:12,0:12:24.05:0,24,278	1/1:1,8:10:18.06:291,18,0	0/0:21,0:21:57.16:0,57,661	0/0:21,0:21:51.15:0,51,594	0/0:14,0:14:36.05:0,36,394	0/0:8,0:8:21.06:0,21,245	0/0:10,0:10:24.05:0,24,269	1/1:1,0:6:9.08:34,9,0	1/1:0,0:6:9.98:35,10,0	1/1:0,0:6:9.98:35,10,0	0/0:10,0:10:24.05:0,24,267	0/0:18,0:18:51.15:0,51,592	0/0:18,0:18:42.11:0,42,488	0/0:19,0:19:57.17:0,57,664
chr10	96560127	.	CAG	C	3059	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.952;DP=603;FS=10.519;HRun=0;HaplotypeScore=71.0728;InbreedingCoeff=0.9978;MQ=82.80;MQ0=0;MQRankSum=-1.552;QD=36.86;ReadPosRankSum=2.971;VQSLOD=5.4147;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1968	1/1:0,7:7:21.07:294,21,0	0/0:17,0:17:41.80:0,42,764	0/0:18,0:18:45.15:0,45,774	1/1:1,18:19:51.17:713,51,0	0/0:30,0:29:87.30:0,87,1567	0/0:39,0:39:99:0,108,1926	0/0:37,0:37:96.31:0,96,1659	0/0:23,0:23:66.23:0,66,1189	0/0:29,0:29:84.28:0,84,1462	0/0:17,0:17:51.17:0,51,905	0/0:13,0:13:39.12:0,39,673	0/0:21,0:21:63.20:0,63,1106	0/0:8,0:8:21.07:0,21,378	1/1:0,13:13:36.12:504,36,0	0/0:23,0:23:63.19:0,63,1079	0/0:20,0:20:60.19:0,60,1051	0/0:20,0:20:60.20:0,60,1054	0/0:28,0:28:81.28:0,81,1440	0/0:22,0:22:63.18:0,63,1062	0/0:19,0:19:57.20:0,57,1026	0/0:22,0:22:60.21:0,60,1074	0/0:18,0:18:45.14:0,45,781	0/0:26,0:26:78.27:0,78,1385	1/1:0,16:16:42.14:588,42,0	1/1:0,28:28:81.27:1135,81,0	0/0:23,0:23:66.23:0,66,1172	0/0:9,0:9:27.09:0,27,486
chr10	96560564	.	CAA	C	4864.81	PASS	AB=0.668;AC=46;AF=0.821;AN=56;BaseQRankSum=-2.071;DP=569;FS=3.770;HRun=15;HaplotypeScore=71.9728;InbreedingCoeff=0.4707;MQ=48.04;MQ0=64;MQRankSum=0.373;QD=9.34;ReadPosRankSum=0.750;VQSLOD=3.1530;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:33:58.37:332,58,0	0/0:1,0:8:7.35:0,7,26	0/1:31,0:4:6.15:6,0,34	0/0:31,1:1:2.37:0,2,8	0/1:4,3:26:37.18:37,0,71	1/1:2,17:20:26.43:265,26,0	1/1:8,16:19:32.97:290,33,0	1/1:7,3:29:63.99:360,64,0	1/1:3,13:14:35.74:302,36,0	1/1:4,14:19:29.76:307,30,0	1/1:7,12:19:26.87:237,27,0	1/1:1,10:13:17.10:193,17,0	1/1:4,9:13:18.05:203,18,0	1/1:2,5:7:8.99:79,9,0	0/0:3,0:7:7.49:0,7,26	1/1:9,0:9:17.58:108,18,0	1/1:10,22:29:53.52:459,54,0	1/1:4,16:19:41.03:349,41,0	1/1:11,1:19:27.91:173,28,0	1/1:5,1:19:19.09:102,19,0	1/1:2,0:7:12.76:59,13,0	1/1:4,8:12:20.72:170,21,0	1/1:6,16:23:35.30:332,35,0	1/1:7,15:20:23.95:211,24,0	0/1:3,1:18:2.53:3,0,57	0/1:7,3:22:63.85:64,0,115	1/1:10,0:23:23.04:91,23,0	1/1:8,0:13:28.07:132,28,0
chr10	96560577	.	AAAT	A	1007.95	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=-3.557;DP=597;FS=0.000;HRun=0;HaplotypeScore=100.2188;InbreedingCoeff=0.4589;MQ=56.26;MQ0=49;MQRankSum=-4.692;QD=9.98;ReadPosRankSum=1.512;VQSLOD=3.1066;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,29:32:63:837,63,0	0/0:10,0:10:19.86:0,20,171	0/0:41,0:9:19.33:0,19,181	0/0:37,0:2:2.86:0,3,19	0/0:32,0:31:56.38:0,56,684	0/0:23,0:22:1.47:0,1,151	0/0:18,0:17:21.19:0,21,88	0/1:35,0:34:32.82:33,0,141	0/0:17,0:15:14.60:0,15,85	0/1:22,0:22:27.62:28,0,194	0/0:18,0:18:31.80:0,32,187	0/0:15,0:15:10.18:0,10,114	0/0:14,0:13:29.42:0,29,155	0/0:10,0:10:18.61:0,19,115	0/0:7,0:6:12.02:0,12,123	1/1:0,10:10:18.05:244,18,0	0/0:33,0:28:14.79:0,15,121	0/0:22,0:22:36.60:0,37,178	0/0:22,0:19:24.08:0,24,155	0/0:25,0:23:33.25:0,33,235	0/0:7,0:6:7.58:0,8,27	0/0:14,0:13:15.72:0,16,109	0/0:25,0:24:26.65:0,27,226	0/0:21,0:20:4.35:0,4,114	0/0:18,0:18:34.97:0,35,321	0/0:25,0:24:52.38:0,52,529	0/0:25,0:23:32.82:0,33,177	0/0:17,0:14:13.79:0,14,63
chr10	96562011	.	AC	A	973.94	PASS	AB=0.987;AC=23;AF=0.411;AN=56;BaseQRankSum=2.760;DP=366;FS=3.689;HRun=11;HaplotypeScore=46.5018;InbreedingCoeff=0.4285;MQ=61.64;MQ0=15;MQRankSum=1.716;QD=5.50;ReadPosRankSum=3.403;VQSLOD=0.8978;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:29:32.84:257,33,0	1/1:4,8:12:14.96:122,15,0	0/0:33,0:11:20.62:0,21,157	0/0:35,0:11:8.21:0,8,69	1/1:8,7:15:23.62:178,24,0	0/1:11,0:11:14.97:15,0,40	0/1:9,1:10:9.24:9,0,57	0/0:15,0:15:5.95:0,6,85	0/0:6,0:6:8.86:0,9,60	0/1:12,0:11:6.52:7,0,50	0/1:12,0:12:8.54:9,0,56	0/0:13,0:13:20.54:0,21,136	0/0:11,0:11:12.81:0,13,117	0/0:14,0:14:8.21:0,8,75	1/1:1,5:7:17.01:128,17,0	1/1:0,7:7:5.99:49,6,0	0/0:21,0:20:47.40:0,47,396	0/0:17,0:16:18.50:0,18,192	0/1:13,0:13:7.63:8,0,18	0/1:7,0:7:5.47:5,0,36	0/0:4,0:4:2.73:0,3,26	0/0:3,0:3:5.98:0,6,47	0/0:7,0:7:8.77:0,9,52	1/1:3,0:3:5.75:30,6,0	1/1:7,4:11:18.61:130,19,0	1/1:2,12:14:36.47:213,36,0	0/1:13,0:13:0.62:1,0,70	0/0:7,0:6:5.87:0,6,39
chr10	96562022	.	CAA	C	766.94	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-1.302;DP=421;FS=10.731;HRun=10;HaplotypeScore=57.9588;InbreedingCoeff=0.7151;MQ=62.96;MQ0=24;MQRankSum=0.978;QD=6.73;ReadPosRankSum=2.633;VQSLOD=-0.7408;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:45.56:0,46,541	0/0:11,0:10:21.03:0,21,227	0/0:53,0:14:10.40:0,10,256	0/0:49,0:12:17.83:0,18,113	0/0:18,0:18:43.98:0,44,478	1/1:4,6:10:6.01:67,6,0	1/1:4,7:11:8.91:83,9,0	0/0:9,0:10:13.78:0,14,103	1/1:2,5:7:3.01:33,3,0	1/1:5,9:13:18:183,18,0	1/1:2,9:11:15.02:165,15,0	1/1:4,9:13:12.02:131,12,0	1/1:7,9:16:3:34,3,0	1/1:4,11:15:9.02:100,9,0	0/0:7,0:7:20.09:0,20,225	0/0:9,0:9:9.50:0,9,119	0/0:26,0:25:50.94:0,51,711	0/0:17,0:16:35.79:0,36,431	0/0:4,0:10:1.32:0,1,59	0/0:5,0:9:2.37:0,2,8	0/0:6,0:6:6.47:0,6,54	1/1:3,0:3:6:57,6,0	1/1:1,6:7:5.71:67,6,0	1/1:7,0:6:3.57:34,4,0	0/0:8,0:8:21.06:0,21,250	0/0:19,0:19:33.07:0,33,361	0/0:7,0:18:1.96:0,2,39	0/0:5,0:4:1.55:0,2,4
chr10	96564711	.	T	TA	574.76	PASS	AB=0.955;AC=8;AF=0.143;AN=56;BaseQRankSum=-2.315;DP=567;FS=1.236;HRun=14;HaplotypeScore=73.2444;InbreedingCoeff=0.3605;MQ=71.62;MQ0=0;MQRankSum=-0.075;QD=4.79;ReadPosRankSum=-0.315;VQSLOD=1.9145;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:19:34.34:0,34,214	0/0:11,0:13:14.36:0,14,145	0/0:23,0:14:1.84:0,2,26	0/0:12,0:7:6.06:0,6,36	0/0:30,0:32:36.93:0,37,334	0/0:21,0:22:55.14:0,55,348	0/1:10,0:11:0.67:1,0,113	0/0:30,0:30:52.12:0,52,331	0/0:28,2:30:16.15:0,16,224	0/1:25,2:27:2.03:2,0,197	0/0:16,0:17:34.40:0,34,216	0/0:17,0:17:26.49:0,26,173	0/0:18,0:18:34.67:0,35,229	0/0:18,0:20:26.11:0,26,219	0/0:18,0:19:37.37:0,37,235	0/0:15,0:15:35.43:0,35,230	1/1:3,18:22:35.83:304,36,0	1/1:5,20:25:15.44:380,15,0	0/0:16,1:17:0.17:0,0,126	0/0:28,2:30:1.97:0,2,249	0/0:9,0:11:15.77:0,16,88	0/1:13,1:14:8.73:9,0,78	0/0:22,0:22:36.22:0,36,259	0/0:19,0:20:37.44:0,37,236	0/1:19,1:20:6.71:7,0,191	0/0:20,0:20:44.29:0,44,288	0/0:33,2:37:27.31:0,27,416	0/0:3,0:3:5.89:0,6,38
chr10	96566056	.	TAA	T	3975.20	PASS	AB=0.675;AC=48;AF=0.857;AN=56;BaseQRankSum=-3.477;DP=498;FS=2.252;HRun=17;HaplotypeScore=74.0742;InbreedingCoeff=0.1634;MQ=77.00;MQ0=1;MQRankSum=-0.863;QD=8.49;ReadPosRankSum=3.295;VQSLOD=0.9944;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,11:31:24.50:214,25,0	0/1:2,3:6:17.18:57,0,17	0/0:30,0:18:20.91:0,21,185	0/1:15,0:13:7.88:8,0,56	1/1:7,15:24:24.14:186,24,0	1/1:10,6:18:26.08:189,26,0	1/1:3,9:13:25.16:199,25,0	1/1:9,1:28:43.85:197,44,0	1/1:7,16:25:41.15:308,41,0	1/1:12,11:25:29.21:264,29,0	1/1:5,8:14:23.55:178,24,0	1/1:3,6:10:17.18:129,17,0	0/1:4,6:11:0.94:110,0,1	1/1:4,6:11:17.34:130,17,0	1/1:4,6:11:11.76:134,12,0	1/1:8,14:24:23.25:217,23,0	0/1:7,3:20:40.66:41,0,75	0/1:5,5:19:66.52:87,0,67	1/1:4,2:15:29.26:155,29,0	1/1:7,0:13:13.51:58,14,0	1/1:3,0:11:7.85:34,8,0	0/1:9,10:19:19.88:101,0,20	1/1:4,6:15:19.85:169,20,0	1/1:4,5:11:17.33:118,17,0	1/1:5,11:18:27.86:211,28,0	1/1:7,11:19:29.27:264,29,0	1/1:10,1:24:24.56:116,25,0	1/1:9,0:18:24.45:104,24,0
chr10	96566880	.	ACAGTTTG	A	1018.03	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.955;DP=645;FS=6.952;HRun=0;HaplotypeScore=147.8671;InbreedingCoeff=0.9178;MQ=91.50;MQ0=0;MQRankSum=-5.891;QD=42.42;ReadPosRankSum=1.118;VQSLOD=2.7828;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,4892	0/0:2,0:2:6.02:0,6,235	0/0:35,0:35:72.18:0,72,2689	0/0:19,0:19:54.16:0,54,1651	0/0:26,0:26:75.26:0,75,2805	0/0:17,0:17:42.14:0,42,1517	0/0:20,0:20:57.20:0,57,2049	0/0:31,0:31:75.26:0,75,2864	0/0:16,0:16:45.15:0,45,1764	0/0:28,0:28:81.27:0,81,2941	0/0:15,0:15:42.14:0,42,1566	0/0:26,0:26:72.25:0,72,2800	0/0:23,0:23:69.24:0,69,2562	0/0:25,0:25:66.23:0,66,2583	0/0:29,0:29:81.28:0,81,3010	0/0:20,0:20:54.17:0,54,1942	1/1:2,15:17:36.12:906,36,0	1/1:1,6:7:9.03:226,9,0	0/0:24,0:24:66.23:0,66,2319	0/0:30,0:30:87.30:0,87,3301	0/0:26,0:26:72.25:0,72,2784	0/0:15,0:15:42.14:0,42,1586	0/0:18,0:18:48.16:0,48,1795	0/0:24,0:24:69.22:0,69,2605	0/0:24,0:24:72.24:0,72,2620	0/0:26,0:26:72.25:0,72,2760	0/0:29,0:29:84.27:0,84,3011	0/0:26,0:26:78.27:0,78,3035
chr10	96568823	.	T	TA	2234.26	PASS	AB=0.810;AC=26;AF=0.500;AN=52;BaseQRankSum=-0.081;DP=385;FS=1.618;HRun=8;HaplotypeScore=36.7407;InbreedingCoeff=0.7916;MQ=40.11;MQ0=42;MQRankSum=-1.271;QD=10.02;ReadPosRankSum=-1.141;VQSLOD=0.6101;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:23:18.01:0,18,165	1/1:0,0:7:19.89:101,20,0	./.	./.	1/1:2,0:11:16.78:87,17,0	0/0:15,0:14:21.01:0,21,192	0/0:11,0:8:15.01:0,15,137	1/1:4,23:17:42.10:464,42,0	0/0:15,0:15:30.02:0,30,274	0/0:11,0:10:9.19:0,9,226	0/0:18,0:16:30.02:0,30,275	0/0:12,0:12:30:0,30,270	0/0:10,0:8:11.96:0,12,102	0/0:6,0:6:6:0,6,55	1/1:0,2:6:11.36:58,11,0	0/0:12,0:12:30:0,30,270	1/1:1,10:9:6.02:69,6,0	1/1:4,14:13:6.02:69,6,0	1/1:3,15:13:33.10:381,33,0	1/1:1,12:12:30.09:346,30,0	1/1:0,17:16:6.02:69,6,0	0/0:5,0:5:9:0,9,82	0/0:11,0:10:8.90:0,9,82	0/1:19,0:14:1.85:2,0,22	1/1:5,0:24:42.85:226,43,0	0/1:5,0:11:4.43:86,0,4	1/1:5,15:19:18.05:200,18,0	1/1:1,17:15:24.07:277,24,0
chr10	96569872	.	GT	G	3627	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=7.858;DP=523;FS=19.314;HRun=4;HaplotypeScore=66.3157;InbreedingCoeff=0.9855;MQ=82.05;MQ0=3;MQRankSum=-0.429;QD=23.25;ReadPosRankSum=4.302;VQSLOD=2.1003;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1280	0/0:8,0:8:18.04:0,18,219	0/0:41,0:26:13.24:0,13,195	0/0:19,0:12:23.58:0,24,178	0/0:31,0:31:90.17:0,90,1052	1/1:1,16:17:30.09:358,30,0	1/1:4,18:22:31.13:378,31,0	0/0:26,0:25:62.30:0,62,906	1/1:0,14:14:30.09:357,30,0	1/1:2,21:23:66.03:683,66,0	1/1:1,12:13:29.40:351,29,0	1/1:0,9:9:21.06:250,21,0	1/1:1,5:6:18.03:200,18,0	1/1:3,10:13:23.94:286,24,0	0/0:17,0:17:50.08:0,50,581	0/0:10,0:10:24.07:0,24,316	0/0:31,0:31:86.95:0,87,1012	0/0:31,0:31:80.66:0,81,1041	0/0:17,0:17:46.60:0,47,559	0/0:23,0:23:66.12:0,66,799	0/0:11,0:11:33.08:0,33,412	1/1:5,14:19:37.90:428,38,0	1/1:2,11:13:15.32:193,15,0	1/1:0,7:7:12.04:143,12,0	0/0:12,0:12:36.09:0,36,455	0/0:19,0:19:32.90:0,33,595	0/0:26,0:26:67.74:0,68,874	0/0:8,0:8:23.98:0,24,261
chr10	96569875	.	TTA	T	612.86	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=12.195;DP=513;FS=20.854;HRun=0;HaplotypeScore=83.9374;InbreedingCoeff=0.7268;MQ=81.67;MQ0=3;MQRankSum=-1.756;QD=4.03;ReadPosRankSum=4.837;VQSLOD=0.5980;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1826	0/0:6,0:6:18.05:0,18,307	0/0:39,0:25:22.79:0,23,332	0/0:19,0:12:25.96:0,26,211	0/0:32,0:32:96.14:0,96,1564	1/1:16,0:16:18.17:53,18,0	1/1:19,1:20:6.38:83,6,0	0/0:26,0:25:77.91:0,78,1343	1/1:14,0:14:18.17:53,18,0	1/1:22,1:23:40.95:250,41,0	0/1:13,0:13:9.25:23,0,9	1/1:9,0:9:12.72:37,13,0	1/1:6,1:7:15.11:113,15,0	1/1:10,0:10:14.54:42,15,0	0/0:18,0:18:45.94:0,46,835	0/0:8,0:8:24.07:0,24,441	0/0:29,0:29:87.05:0,87,1408	0/0:32,0:32:90.16:0,90,1566	0/0:16,0:16:48.08:0,48,829	0/0:23,0:23:50.86:0,51,1095	0/0:11,0:11:33.10:0,33,601	1/1:16,1:17:4.35:122,4,0	0/1:14,0:14:26.22:27,0,26	0/1:9,0:9:7.77:8,0,33	0/0:12,0:12:36.09:0,36,620	0/0:19,0:19:53.69:0,54,857	0/0:26,0:26:69.15:0,69,1246	0/0:8,0:8:24.06:0,24,379
chr10	96569876	.	TA	T	704.22	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=11.881;DP=517;FS=19.145;HRun=12;HaplotypeScore=74.9965;InbreedingCoeff=0.5504;MQ=81.48;MQ0=3;MQRankSum=0.503;QD=3.83;ReadPosRankSum=2.999;VQSLOD=0.0558;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:84.09:0,84,826	0/0:6,0:6:12.02:0,12,122	0/0:41,0:26:13.89:0,14,185	0/1:19,0:12:3.36:3,0,43	0/0:28,1:30:48.67:0,49,643	1/1:17,0:17:7.82:80,8,0	0/1:21,0:21:18.95:85,0,19	0/0:25,1:25:42.94:0,43,606	1/1:14,0:14:26.64:106,27,0	1/1:23,0:23:38.92:158,39,0	0/1:14,0:14:12.62:76,0,13	1/1:9,0:9:18.32:71,18,0	1/1:7,0:7:19.18:88,19,0	1/1:11,0:11:21.07:84,21,0	0/0:18,0:18:32.02:0,32,368	0/0:8,0:8:21.04:0,21,213	0/0:27,0:27:61.81:0,62,598	0/0:29,2:31:34.65:0,35,698	0/0:16,1:17:21.83:0,22,391	0/0:23,0:23:32.77:0,33,461	0/0:11,0:11:27.05:0,27,273	1/1:17,0:17:6.85:84,7,0	0/1:14,0:14:32.68:33,0,37	0/1:9,0:9:28.08:28,0,29	0/0:13,0:13:30.05:0,30,299	0/0:17,1:18:17.40:0,17,346	0/0:22,1:27:39.69:0,40,551	0/1:9,0:9:0.97:1,0,125
chr10	96570053	.	GA	G	1122.17	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.325;DP=470;FS=0.597;HRun=8;HaplotypeScore=68.3610;InbreedingCoeff=0.9917;MQ=88.03;MQ0=0;MQRankSum=-4.674;QD=22.44;ReadPosRankSum=0.834;VQSLOD=4.1481;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:99:983,102,0	0/0:6,0:6:18.06:0,18,217	0/0:25,0:25:48:0,48,510	0/0:17,0:17:30.07:0,30,331	0/0:16,0:16:39.58:0,40,461	0/0:14,0:14:39.12:0,39,471	0/0:18,0:18:51.14:0,51,605	0/0:30,0:30:81.20:0,81,961	0/0:16,0:16:48.13:0,48,568	0/0:18,0:18:48.13:0,48,567	0/0:12,0:12:36.09:0,36,422	0/0:11,0:11:33.10:0,33,398	0/0:9,0:9:27.08:0,27,325	0/0:12,0:12:33.05:0,33,365	0/0:22,0:22:60.18:0,60,725	1/1:1,10:11:27.04:261,27,0	0/0:27,0:27:75.18:0,75,877	0/0:11,0:11:33.10:0,33,399	0/0:19,0:19:54.14:0,54,622	0/0:15,0:15:42.13:0,42,507	0/0:15,0:15:36.11:0,36,434	0/0:15,0:15:45.14:0,45,543	0/0:13,0:13:39.11:0,39,459	0/0:7,0:7:21.05:0,21,241	0/0:12,0:12:36.10:0,36,424	0/0:19,0:19:54.17:0,54,652	0/0:23,0:23:63.18:0,63,749	0/0:18,0:18:51.16:0,51,616
chr10	96570758	.	CATATATATATAT	C	1802.80	PASS	AB=0.848;AC=24;AF=0.571;AN=42;BaseQRankSum=1.607;DP=273;FS=0.000;HRun=0;HaplotypeScore=115.8257;InbreedingCoeff=0.4136;MQ=63.95;MQ0=5;MQRankSum=-1.783;QD=12.18;ReadPosRankSum=1.916;VQSLOD=2.2077;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:13,0:8:0:0,0,0	0/0:16,0:8:6.02:0,6,84	./.	1/1:3,3:6:6.02:150,6,0	0/0:14,2:19:0.93:0,1,2	0/1:18,0:18:0:0,0,0	1/1:7,1:9:3.01:84,3,0	1/1:12,4:17:13.58:498,14,0	0/1:6,1:12:0:0,0,0	1/1:5,3:8:2.34:9,2,0	1/1:1,0:3:3:84,3,0	0/1:5,1:8:0:0,0,0	0/0:5,0:4:3.01:0,3,166	0/0:2,0:3:3.48:0,3,151	1/1:11,0:16:8.67:245,9,0	1/1:11,0:9:5.38:77,5,0	1/1:8,0:9:3.01:84,3,0	0/0:12,0:18:0:0,0,0	./.	./.	./.	0/1:6,0:6:0:0,0,0	./.	0/0:1,0:1:0.89:0,1,2	1/1:10,0:18:26.03:593,26,0	1/1:3,0:6:3.01:84,3,0
chr10	96570815	.	A	ATG	3938.52	PASS	AB=0.748;AC=39;AF=0.696;AN=56;BaseQRankSum=1.118;DP=413;FS=7.602;HRun=0;HaplotypeScore=127.0025;InbreedingCoeff=-0.1231;MQ=47.11;MQ0=11;MQRankSum=0.256;QD=10.76;ReadPosRankSum=2.690;VQSLOD=3.1814;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:3,11:15:17.22:125,0,17	1/1:0,5:5:9.03:146,9,0	0/0:23,0:2:5.80:0,6,44	0/0:19,0:3:2.44:0,2,19	1/1:5,0:5:3.01:45,3,0	1/1:3,12:15:1.76:132,2,0	0/1:8,15:23:49.72:80,0,50	0/1:34,0:32:55:185,0,55	0/1:4,12:16:49.68:85,0,50	1/1:11,12:23:45.86:559,46,0	0/1:10,12:22:30.72:43,0,31	0/1:3,10:13:27.51:75,0,28	1/1:4,12:16:11.87:160,12,0	1/1:3,10:12:6.02:97,6,0	0/1:2,4:6:21.47:180,0,21	1/1:1,4:5:6.02:98,6,0	1/1:2,13:15:19.30:254,19,0	1/1:11,3:14:15.14:426,15,0	0/1:13,0:11:2.58:137,0,3	0/1:20,0:20:24.15:200,0,24	0/1:20,0:20:24.51:70,0,25	1/1:1,8:9:6.02:97,6,0	0/1:9,8:17:49.09:85,0,49	1/1:2,8:10:2.60:48,3,0	0/0:1,4:5:3:0,3,25	1/1:0,9:9:24.08:378,24,0	1/1:21,0:21:15.04:171,15,0	1/1:6,0:6:6.01:61,6,0
chr10	96570830	.	T	TGC	2913.88	PASS	AB=0.950;AC=30;AF=0.536;AN=56;BaseQRankSum=5.077;DP=453;FS=1.278;HRun=0;HaplotypeScore=119.4401;InbreedingCoeff=-0.4604;MQ=53.79;MQ0=12;MQRankSum=-0.041;QD=7.47;ReadPosRankSum=8.560;VQSLOD=2.6013;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:49.83:50,0,91	0/1:6,0:6:29.83:61,0,30	0/0:30,0:3:8.97:0,9,82	0/0:25,0:6:5.88:0,6,56	0/1:1,1:6:18.86:44,0,19	0/1:16,0:16:56.71:57,0,68	0/1:22,0:22:24.29:24,0,147	1/1:14,18:30:47.65:545,48,0	0/1:19,0:19:23.30:23,0,165	0/1:24,0:24:89.86:233,0,90	0/1:18,0:19:14.68:15,0,49	0/1:18,0:18:20.57:21,0,159	0/1:17,0:17:49.39:54,0,49	0/1:14,0:13:15.88:38,0,16	0/1:7,0:7:47.28:78,0,47	0/1:7,0:7:35.59:36,0,38	0/1:16,1:17:23.92:145,0,24	0/1:15,0:15:49.55:176,0,50	1/1:6,7:11:23.87:300,24,0	1/1:4,14:19:5.65:395,6,0	0/1:5,15:21:0.40:145,0,0	0/1:11,0:11:37.74:39,0,38	0/1:19,0:19:26.48:26,0,134	0/1:11,0:11:18.67:19,0,39	0/0:7,0:7:9:0,9,89	0/1:12,0:11:44.53:185,0,45	1/1:5,14:19:15.05:261,15,0	1/1:1,7:8:6.02:105,6,0
chr10	96571387	.	C	CATAG	12138.94	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-14.223;DP=721;FS=13.822;HRun=0;HaplotypeScore=115.2620;InbreedingCoeff=0.9973;MQ=72.90;MQ0=0;MQRankSum=-6.763;QD=58.36;ReadPosRankSum=0.427;VQSLOD=5.7104;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,2033	0/0:14,0:14:42.14:0,42,774	0/0:17,0:17:48.16:0,48,882	0/0:15,0:15:39.13:0,39,710	0/0:23,0:23:63.19:0,63,1143	0/0:20,0:20:54.17:0,54,977	0/0:34,0:34:81.26:0,81,1472	1/1:7,16:24:63.21:1506,63,0	0/0:42,0:42:99:0,126,2274	0/0:26,0:26:69.22:0,69,1195	0/0:6,0:6:15.04:0,15,251	0/0:33,0:33:90.31:0,90,1639	0/0:33,0:33:93.32:0,93,1735	0/0:28,0:28:84.28:0,84,1539	0/0:40,0:40:99:0,114,2089	0/0:21,0:21:60.21:0,60,1120	1/1:4,21:25:57.20:1518,57,0	1/1:1,27:29:66.22:1734,66,0	1/1:9,14:24:54.17:1370,54,0	1/1:4,17:21:45.15:1199,45,0	1/1:4,48:55:99:2660,101,0	0/0:28,0:28:78.26:0,78,1426	0/0:17,0:17:42.10:0,42,722	0/0:32,0:32:93.32:0,93,1735	0/0:14,0:14:39.13:0,39,728	0/0:29,0:29:72.24:0,72,1291	1/1:2,13:14:39.13:1031,39,0	1/1:0,15:15:42.14:1120,42,0
chr10	96571970	.	AAGAG	A	6821.29	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-6.335;DP=588;FS=8.503;HRun=0;HaplotypeScore=130.8987;InbreedingCoeff=0.9378;MQ=63.83;MQ0=7;MQRankSum=3.082;QD=33.44;ReadPosRankSum=5.841;VQSLOD=4.5093;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:35:48.15:0,48,827	0/0:2,0:3:3.01:0,3,53	0/0:32,0:24:41.97:0,42,822	0/0:26,0:18:21.48:0,21,405	0/0:8,0:31:45.83:0,46,838	1/1:4,12:15:24.08:403,24,0	1/1:4,18:22:48.16:806,48,0	0/0:33,0:37:67.10:0,67,1244	1/1:1,13:14:30.10:504,30,0	1/1:7,18:26:57.19:930,57,0	1/1:5,9:14:27.05:423,27,0	1/1:1,11:11:30.10:504,30,0	1/1:1,16:17:45.15:755,45,0	1/1:6,17:23:45.15:756,45,0	0/0:7,0:19:38.09:0,38,642	0/0:4,0:19:48.16:0,48,835	0/0:15,0:15:12.04:0,12,208	0/0:14,0:14:21.03:0,21,346	0/0:13,0:15:27.05:0,27,516	0/0:21,0:29:11.78:0,12,193	0/0:18,0:21:2.49:0,2,29	1/1:7,16:23:42.14:705,42,0	1/1:5,11:17:30.09:481,30,0	1/1:4,16:19:33.11:554,33,0	0/0:3,0:21:42.14:0,42,739	0/0:10,0:26:65.02:0,65,1127	0/0:11,0:22:39.13:0,39,674	0/0:6,0:14:39.11:0,39,692
chr10	96572278	.	G	GT	8209.10	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-14.833;DP=538;FS=2.177;HRun=9;HaplotypeScore=70.9538;InbreedingCoeff=0.9841;MQ=71.38;MQ0=0;MQRankSum=1.062;QD=23.39;ReadPosRankSum=1.292;VQSLOD=5.7943;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,2:33:71.35:393,71,0	1/1:1,5:6:12.03:133,12,0	0/0:10,0:10:17.98:0,18,156	0/0:15,0:15:32.91:0,33,274	1/1:2,24:27:60.63:664,61,0	1/1:1,28:29:55.20:837,55,0	1/1:0,19:20:56.99:612,57,0	0/0:4,0:28:35.58:0,36,109	1/1:6,14:20:36.10:398,36,0	1/1:7,20:27:40.05:639,40,0	1/1:3,13:16:42.07:448,42,0	1/1:4,13:17:13.05:372,13,0	1/1:2,10:12:24.06:265,24,0	1/1:2,16:18:45.12:496,45,0	1/1:3,6:9:15.04:166,15,0	1/1:2,0:13:28.53:147,29,0	0/0:0,0:19:36.67:0,37,108	0/0:5,0:22:30.33:0,30,89	0/0:2,0:20:33.06:0,33,98	0/0:2,0:22:36.66:0,37,108	0/0:4,0:23:36.66:0,37,108	1/1:0,17:18:48.13:531,48,0	1/1:2,20:22:45.12:498,45,0	1/1:3,10:13:24.06:266,24,0	1/1:3,21:24:53.85:597,54,0	1/1:5,22:27:69.16:747,69,0	0/0:3,0:18:24.44:0,24,72	0/0:2,0:10:14.26:0,14,42
chr10	96572394	.	T	TAACTAAAAAA	10185.50	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=9.556;DP=456;FS=3.133;HRun=0;HaplotypeScore=147.6742;InbreedingCoeff=0.9693;MQ=67.59;MQ0=0;MQRankSum=-12.275;QD=97.94;ReadPosRankSum=-1.118;VQSLOD=4.5558;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.27:0,90,2717	0/0:9,0:9:27.09:0,27,872	0/0:7,0:6:11.40:0,11,303	0/0:7,0:7:7.67:0,8,364	0/0:30,0:30:78.26:0,78,2437	0/0:13,0:13:39.13:0,39,1297	0/0:21,0:21:60.21:0,60,1967	1/1:16,4:20:54.19:1659,54,0	0/0:17,0:17:48.16:0,48,1597	0/0:25,0:25:69.23:0,69,2208	0/0:24,0:24:66.22:0,66,2114	0/0:14,0:14:42.13:0,42,1247	0/0:14,0:14:42.14:0,42,1372	0/0:17,0:17:42.13:0,42,1381	0/0:12,0:12:36.10:0,36,1016	0/0:8,0:8:24.07:0,24,725	1/1:11,7:18:45.22:1614,45,0	1/1:8,1:9:24.04:708,24,0	1/1:11,3:15:42.14:1447,42,0	1/1:2,14:17:45.15:2083,45,0	1/1:2,0:3:8.99:140,9,0	0/0:19,0:19:57.18:0,57,1785	0/0:19,0:19:57.20:0,57,1797	0/0:21,0:21:63.20:0,63,1975	0/0:16,0:16:45.15:0,45,1345	0/0:27,0:27:78.26:0,78,2446	1/1:5,10:15:45.15:1822,45,0	1/1:3,4:7:18.06:713,18,0
chr10	96572398	.	TG	T	1010.56	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.976;DP=431;FS=0.000;HRun=1;HaplotypeScore=83.5881;InbreedingCoeff=0.9520;MQ=67.57;MQ0=0;MQRankSum=-12.155;QD=12.03;ReadPosRankSum=0.771;VQSLOD=1.9598;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.27:0,93,1415	0/0:9,0:9:27.09:0,27,429	0/0:7,0:5:6.94:0,7,143	0/0:7,0:7:20.11:0,20,234	0/0:28,0:28:84.26:0,84,1293	0/0:13,0:13:39.13:0,39,623	0/0:23,0:23:69.20:0,69,1050	1/1:14,4:18:28.21:197,28,0	0/0:16,0:16:48.16:0,48,767	0/0:25,0:25:75.22:0,75,1172	0/0:23,0:23:69.24:0,69,1103	0/0:15,0:15:45.15:0,45,717	0/0:15,0:15:45.15:0,45,717	0/0:17,0:17:50.19:0,50,750	0/0:11,0:11:33.11:0,33,523	0/0:7,0:7:21.07:0,21,336	1/1:6,7:13:25.71:172,26,0	1/1:5,1:6:10.26:63,10,0	1/1:6,4:10:14.68:94,15,0	1/1:0,15:15:44:279,44,0	1/1:1,1:2:5.97:50,6,0	0/0:19,0:19:57.18:0,57,886	0/0:20,0:20:60.19:0,60,916	0/0:20,0:20:60.19:0,60,934	0/0:14,0:14:42.14:0,42,671	0/0:27,0:27:81.26:0,81,1250	1/1:4,10:14:36.56:247,37,0	1/1:2,4:6:14.90:108,15,0
chr10	96572412	.	AT	A	2033.46	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.721;DP=468;FS=9.248;HRun=10;HaplotypeScore=81.3845;InbreedingCoeff=0.9449;MQ=62.86;MQ0=0;MQRankSum=-9.163;QD=16.53;ReadPosRankSum=-2.616;VQSLOD=2.7378;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:93.07:0,93,1001	0/0:10,0:10:24.06:0,24,265	0/0:6,0:3:6.01:0,6,64	0/0:8,0:8:6.29:0,6,44	0/0:28,0:31:80.83:0,81,837	0/0:14,1:15:16.06:0,16,405	0/0:24,1:25:43.13:0,43,704	1/1:5,19:24:26.82:462,27,0	0/0:19,0:19:48.13:0,48,531	0/0:18,0:18:42.09:0,42,453	0/0:19,0:19:48.13:0,48,531	0/0:15,0:16:44.95:0,45,479	0/0:11,0:11:27.07:0,27,298	0/0:16,0:16:42.11:0,42,464	0/0:12,0:12:33.09:0,33,365	0/0:8,0:8:12.02:0,12,124	1/1:2,13:15:32.99:286,33,0	1/1:0,9:9:26.99:234,27,0	1/1:4,12:16:35.96:312,36,0	1/1:7,17:24:16.15:267,16,0	1/1:3,7:10:17.96:156,18,0	0/0:17,0:17:42.10:0,42,457	0/0:19,0:19:45.12:0,45,498	0/0:21,0:22:56.97:0,57,603	0/0:11,1:15:8.85:0,9,329	0/0:23,0:24:60:0,60,645	1/1:4,11:15:32.98:286,33,0	1/1:0,10:10:26.99:234,27,0
chr10	96573136	.	CT	C	6198.09	PASS	AB=0.654;AC=50;AF=0.893;AN=56;BaseQRankSum=0.166;DP=545;FS=2.071;HRun=12;HaplotypeScore=56.2751;InbreedingCoeff=0.2367;MQ=57.19;MQ0=11;MQRankSum=0.180;QD=11.72;ReadPosRankSum=2.596;VQSLOD=4.5798;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:31:50.76:395,51,0	1/1:1,10:11:17.93:139,18,0	0/1:17,2:6:8.03:8,0,28	0/0:14,2:9:8.30:0,8,66	1/1:2,21:23:47.80:368,48,0	1/1:4,15:19:38.83:302,39,0	1/1:0,14:13:26.90:209,27,0	1/1:10,15:25:44.29:347,44,0	1/1:2,12:15:13.99:99,14,0	1/1:9,21:28:27.16:387,27,0	1/1:2,15:16:32.83:249,33,0	1/1:2,6:8:11:76,11,0	1/1:3,9:12:17.93:139,18,0	1/1:0,8:8:8.97:70,9,0	1/1:3,12:14:23.88:186,24,0	1/1:0,6:6:8.97:70,9,0	0/1:9,37:45:17.81:419,0,18	0/1:4,7:13:43.87:58,0,44	1/1:9,18:28:14.19:390,14,0	1/1:8,20:29:54.85:405,55,0	1/1:0,8:8:14.94:116,15,0	1/1:3,13:16:23.75:185,24,0	1/1:5,15:19:26.83:208,27,0	1/1:3,12:15:30.17:217,30,0	0/1:7,21:29:6.12:302,0,6	1/1:6,19:25:28.36:330,28,0	1/1:8,19:26:21.69:292,22,0	1/1:4,11:14:29.87:232,30,0
chr10	96573724	.	C	CTT	2005.97	PASS	AB=0.672;AC=22;AF=0.393;AN=56;BaseQRankSum=0.687;DP=543;FS=6.858;HRun=14;HaplotypeScore=87.4379;InbreedingCoeff=0.6344;MQ=74.92;MQ0=7;MQRankSum=-1.413;QD=8.29;ReadPosRankSum=-4.158;VQSLOD=0.3886;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:29:22.53:0,23,263	1/1:2,2:10:15.33:112,15,0	0/0:31,0:21:2.64:0,3,34	0/0:30,0:20:11.25:0,11,61	1/1:6,0:18:13.73:79,14,0	0/0:19,0:20:20.63:0,21,215	0/0:18,0:20:32.11:0,32,247	1/1:13,7:22:33.89:319,34,0	0/0:16,0:16:13.85:0,14,104	0/0:21,0:21:20.03:0,20,159	0/0:18,0:19:0.79:0,1,139	0/0:11,0:11:14.65:0,15,125	0/0:14,0:15:18.78:0,19,145	0/0:13,0:16:14.36:0,14,111	1/1:4,1:14:18.46:128,18,0	0/0:15,0:15:20.48:0,20,175	0/1:8,2:25:5.35:119,0,5	1/1:17,2:20:32:331,32,0	1/1:10,7:21:25.81:287,26,0	1/1:7,14:21:39.35:399,39,0	1/1:8,7:16:14.77:126,15,0	0/0:17,0:17:20.40:0,20,172	0/0:16,0:17:26.47:0,26,208	0/0:17,0:18:20.64:0,21,217	0/1:6,0:15:14.01:28,0,14	0/1:15,0:23:21.98:89,0,22	0/1:13,7:21:13.12:86,0,13	1/1:2,11:16:9.02:107,9,0
chr10	96573916	.	TTCTCTCTCTCTCTCTCTC	T	3519.84	PASS	AB=0.737;AC=22;AF=0.393;AN=56;BaseQRankSum=4.333;DP=476;FS=3.984;HRun=0;HaplotypeScore=186.2818;InbreedingCoeff=0.4511;MQ=67.82;MQ0=9;MQRankSum=-3.712;QD=13.86;ReadPosRankSum=-1.140;VQSLOD=2.6260;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:36:3.67:162,0,4	0/0:4,0:4:3.01:0,3,99	0/1:29,0:15:0:0,0,0	0/0:37,0:19:9.86:0,10,96	0/0:11,0:12:6.02:0,6,160	0/1:13,1:16:16.08:180,0,16	1/1:17,2:18:9.03:332,9,0	0/0:16,0:13:15:0,15,211	0/1:6,11:17:28.64:454,0,29	0/1:12,8:20:12.91:402,0,13	1/1:7,1:10:6.02:119,6,0	1/1:8,4:12:3.01:78,3,0	1/1:8,10:18:12.12:691,12,0	1/1:15,0:15:8.92:192,9,0	0/0:9,0:14:15.05:0,15,616	1/1:4,0:11:9.03:302,9,0	0/0:13,0:17:14.48:0,14,444	0/0:20,0:20:21.05:0,21,741	0/0:18,0:15:8.62:0,9,270	0/0:11,0:15:15.05:0,15,732	0/0:21,0:22:15.50:0,15,482	0/1:8,7:15:22.87:102,0,23	1/1:7,5:13:8.58:214,9,0	1/1:19,2:21:11.98:290,12,0	0/0:9,0:13:6.02:0,6,123	0/0:12,0:12:24.08:0,24,999	0/0:6,0:6:6.02:0,6,388	0/0:10,0:10:16.27:0,16,388
chr10	96575157	.	A	ATT	2099.59	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-1.892;DP=412;FS=6.401;HRun=5;HaplotypeScore=71.3583;InbreedingCoeff=0.8863;MQ=63.73;MQ0=8;MQRankSum=3.087;QD=19.09;ReadPosRankSum=-0.857;VQSLOD=0.2830;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:64.09:0,64,739	0/0:5,0:5:14.91:0,15,167	0/0:16,0:5:8.87:0,9,84	0/0:17,0:9:4.12:0,4,22	0/0:17,0:17:35.51:0,36,437	1/1:1,18:20:15.01:217,15,0	1/1:1,9:10:6.02:105,6,0	0/0:38,0:38:98.97:0,99,1101	1/1:5,1:6:12.02:159,12,0	1/1:3,13:16:36.07:556,36,0	1/1:4,12:16:21.03:399,21,0	1/1:1,10:11:12:161,12,0	1/1:1,7:8:12.04:210,12,0	1/1:1,7:8:6.02:105,6,0	0/0:9,0:9:23.99:0,24,271	0/0:9,0:9:24.07:0,24,305	0/0:38,0:37:81.13:0,81,975	0/0:20,0:19:45.11:0,45,549	0/0:30,0:30:64.92:0,65,927	0/0:10,0:10:30.08:0,30,359	0/0:9,0:9:20.09:0,20,232	1/1:2,0:2:6.02:105,6,0	1/1:2,2:3:9.02:132,9,0	1/1:1,8:9:10.28:160,10,0	0/0:13,0:13:24.04:0,24,275	0/0:18,0:18:41.96:0,42,466	0/0:9,0:8:15.05:0,15,187	0/0:9,0:9:18.04:0,18,214
chr10	96575167	.	TTGTGTGTGTGTGTGTG	T	1200.79	PASS	AB=1.000;AC=9;AF=0.173;AN=52;BaseQRankSum=1.671;DP=400;FS=6.672;HRun=0;HaplotypeScore=145.1822;InbreedingCoeff=0.4958;MQ=57.58;MQ0=14;MQRankSum=-0.440;QD=14.13;ReadPosRankSum=-1.305;VQSLOD=2.0779;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:37:50.70:0,51,2588	0/0:5,0:6:9.03:0,9,569	0/0:14,0:3:3.01:0,3,65	./.	0/0:15,0:15:8.75:0,9,371	0/0:19,0:19:6.02:0,6,376	0/0:11,0:12:9.03:0,9,480	0/1:25,0:25:27.99:133,0,28	0/0:5,0:6:6.02:0,6,299	0/0:12,0:12:15.05:0,15,732	0/0:13,0:14:15.05:0,15,759	0/0:8,0:10:12.04:0,12,634	./.	0/0:7,0:8:3.01:0,3,169	0/0:7,0:8:12.04:0,12,831	0/0:8,0:10:6.02:0,6,375	0/0:24,0:36:42.54:0,43,1006	0/0:15,0:20:24.04:0,24,670	1/1:21,11:32:29.18:551,29,0	1/1:3,8:11:11.99:317,12,0	0/0:12,0:10:2.84:0,3,14	0/0:2,0:2:6.02:0,6,198	0/0:4,0:4:9.03:0,9,391	0/0:9,0:9:3.01:0,3,167	0/0:8,0:14:9.03:0,9,568	0/0:21,0:20:33.11:0,33,1704	1/1:5,5:9:6.02:208,6,0	1/1:5,2:6:3.01:132,3,0
chr10	96576553	.	TG	T	1605.04	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.861;DP=444;FS=1.215;HRun=4;HaplotypeScore=58.8062;InbreedingCoeff=0.8926;MQ=81.43;MQ0=0;MQRankSum=-3.354;QD=32.10;ReadPosRankSum=3.013;VQSLOD=4.2101;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.25:0,87,1215	0/0:1,0:1:3.01:0,3,43	0/0:31,0:30:84.28:0,84,1193	0/0:22,0:18:50.04:0,50,685	0/0:12,0:12:30.09:0,30,427	0/0:15,0:15:45.12:0,45,606	0/0:27,0:27:75.25:0,75,1078	0/0:14,0:13:36.08:0,36,495	0/0:13,0:13:33.11:0,33,459	0/0:16,0:16:48.16:0,48,686	0/0:6,0:6:18.06:0,18,259	0/0:13,0:13:36.11:0,36,501	0/0:15,0:15:42.07:0,42,545	0/0:9,0:9:27.08:0,27,370	0/0:11,0:11:30.10:0,30,431	0/0:5,0:4:12.04:0,12,173	1/1:0,26:26:72.18:871,72,0	1/1:0,24:24:69.22:855,69,0	0/0:15,0:14:39.12:0,39,543	0/0:7,0:7:21.05:0,21,283	0/0:27,0:27:75.24:0,75,1061	0/0:15,0:15:45.15:0,45,645	0/0:9,0:9:27.09:0,27,385	0/0:31,0:31:90.30:0,90,1293	0/0:16,0:16:45.15:0,45,648	0/0:14,0:14:42.14:0,42,604	0/0:11,0:11:30.06:0,30,407	0/0:7,0:7:18.04:0,18,240
chr10	96576736	.	CA	C	1135.81	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=3.606;DP=323;FS=3.401;HRun=3;HaplotypeScore=56.2948;InbreedingCoeff=0.6802;MQ=74.66;MQ0=0;MQRankSum=-2.975;QD=19.25;ReadPosRankSum=5.978;VQSLOD=3.2375;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:41.71:0,42,367	0/0:6,0:6:14.94:0,15,176	0/0:13,0:9:10.89:0,11,108	0/1:20,0:18:12.09:12,0,148	0/0:14,0:14:42.10:0,42,504	0/0:11,0:11:29.89:0,30,262	0/0:17,0:17:38.96:0,39,380	0/0:4,0:4:11.98:0,12,103	0/0:10,0:10:16.54:0,17,136	0/0:13,0:13:32.80:0,33,278	0/0:3,0:3:6.01:0,6,70	0/0:8,0:8:18.02:0,18,167	0/0:7,0:7:18:0,18,190	0/0:7,0:7:12.48:0,12,110	0/0:11,0:10:33.04:0,33,425	0/0:5,0:5:12.02:0,12,115	1/1:0,23:23:60.19:736,60,0	1/1:0,16:16:42.13:516,42,0	0/0:16,0:16:36.03:0,36,371	0/0:9,0:9:14.89:0,15,117	0/0:10,0:9:17.58:0,18,171	0/0:11,0:11:28.26:0,28,247	0/0:8,0:8:15.01:0,15,150	0/0:10,0:9:23.25:0,23,217	0/0:14,0:14:36.10:0,36,452	0/0:18,0:18:54.17:0,54,701	0/0:6,0:6:13.25:0,13,111	0/0:9,0:9:20.42:0,20,163
chr10	96577121	.	A	AACCACAACCACC	5471.70	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=0.332;DP=544;FS=20.534;HRun=0;HaplotypeScore=196.6548;InbreedingCoeff=0.1794;MQ=77.27;MQ0=0;MQRankSum=-9.578;QD=50.66;ReadPosRankSum=-4.211;VQSLOD=2.4101;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,105,3565	0/0:12,0:12:33.11:0,33,1125	0/0:30,0:26:50.98:0,51,994	0/0:31,0:30:45.09:0,45,1208	0/0:20,0:20:45.13:0,45,1348	0/0:24,0:24:60.19:0,60,1941	0/0:25,0:25:60.20:0,60,1980	0/1:18,0:18:39.84:781,0,40	0/0:13,0:13:33.11:0,33,1138	0/0:20,0:20:48.15:0,48,1529	0/0:12,0:12:27.08:0,27,838	0/0:21,0:21:44.68:0,45,1645	0/0:34,0:34:78.24:0,78,2500	0/0:19,0:19:51.13:0,51,1637	0/0:28,0:28:69.23:0,69,2332	0/0:16,0:16:30.10:0,30,1061	0/1:14,0:14:76.85:474,0,77	0/1:6,0:6:51.93:125,0,52	0/1:9,0:9:2.93:704,0,3	0/1:9,0:9:10.05:167,0,10	1/1:26,4:32:4.59:1347,5,0	0/0:18,0:18:34.23:0,34,1609	0/0:8,0:8:15.05:0,15,474	0/0:22,0:22:57.16:0,57,1851	0/0:17,0:17:39.13:0,39,1222	0/0:25,0:25:57.19:0,57,1870	0/1:14,0:14:4.88:1413,0,5	0/1:6,0:6:8.95:460,0,9
chr10	96577127	.	A	AACCACCACCACC	6213.53	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-3.848;DP=565;FS=8.869;HRun=0;HaplotypeScore=197.6644;InbreedingCoeff=0.9366;MQ=73.81;MQ0=0;MQRankSum=-7.711;QD=50.93;ReadPosRankSum=-4.417;VQSLOD=2.9052;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,114,3580	0/0:13,0:13:39.11:0,39,1215	0/0:32,0:28:45.70:0,46,961	0/0:29,0:28:42.14:0,42,1150	0/0:17,0:17:39.13:0,39,1304	0/0:24,0:24:60.21:0,60,2036	0/0:24,0:24:60.19:0,60,2007	1/1:14,0:14:18.04:632,18,0	0/0:12,0:12:33.11:0,33,1166	0/0:22,0:22:45.15:0,45,1466	0/0:12,0:12:24.08:0,24,831	0/0:21,0:21:51.14:0,51,1619	0/0:34,0:34:78.25:0,78,2520	0/0:19,0:19:51.16:0,51,1626	0/0:29,0:29:69.22:0,69,2313	0/0:14,0:14:30.10:0,30,1065	1/1:16,0:16:20.99:514,21,0	1/1:4,0:9:3.01:158,3,0	1/1:4,3:13:33.10:1466,33,0	1/1:7,2:12:6.02:213,6,0	1/1:34,1:35:30.05:1109,30,0	0/0:20,0:20:51.15:0,51,1644	0/0:9,0:9:15.05:0,15,502	0/0:23,0:23:54.17:0,54,1834	0/0:20,0:20:48.10:0,48,1288	0/0:25,0:25:57.17:0,57,1854	1/1:5,8:18:27.09:1589,27,0	1/1:1,4:5:9.03:534,9,0
chr10	96577574	.	CATATATATATATATATATAT	C	4478.67	PASS	AB=0.707;AC=30;AF=0.625;AN=48;BaseQRankSum=1.860;DP=294;FS=0.000;HRun=0;HaplotypeScore=148.9820;InbreedingCoeff=0.0419;MQ=58.37;MQ0=6;MQRankSum=-1.615;QD=20.45;ReadPosRankSum=4.714;VQSLOD=3.1460;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:25:8.84:93,0,9	1/1:4,0:7:6.02:199,6,0	0/0:17,0:3:0.94:0,1,1	0/0:39,0:12:10.39:0,10,179	0/1:6,0:8:38.97:90,0,39	0/1:5,0:11:37.40:111,0,37	./.	1/1:19,12:31:36.08:776,36,0	1/1:1,0:4:2.96:19,3,0	0/1:7,0:8:10.48:10,0,129	0/0:5,0:10:2.96:0,3,25	0/0:3,0:3:6.01:0,6,114	1/1:0,0:1:3.01:59,3,0	1/1:0,0:3:5.91:38,6,0	1/1:1,0:3:3.01:99,3,0	0/1:4,1:5:8.83:156,0,9	0/1:11,0:21:5.09:132,0,5	1/1:7,0:15:6.02:279,6,0	1/1:12,7:19:10.63:309,11,0	1/1:5,8:14:17.92:547,18,0	./.	./.	0/0:1,0:2:3.01:0,3,41	./.	0/1:3,0:8:34.28:253,0,34	0/1:4,0:10:12.15:332,0,12	1/1:2,15:17:15.05:812,15,0	1/1:6,2:8:3.01:162,3,0
chr10	96577587	.	A	AACG	191.91	PASS	AB=0.936;AC=13;AF=0.260;AN=50;BaseQRankSum=-1.010;DP=252;FS=3.481;HRun=0;HaplotypeScore=101.3210;InbreedingCoeff=-0.1427;MQ=55.67;MQ0=11;MQRankSum=-0.662;QD=1.57;ReadPosRankSum=-1.468;VQSLOD=1.4338;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,1:22:43.45:43,0,103	0/0:6,0:5:8.93:0,9,65	1/1:15,0:3:1.25:3,1,0	0/0:39,0:13:12.80:0,13,166	0/1:6,2:8:37.67:38,0,114	0/1:10,0:10:4.69:5,0,158	./.	0/1:24,0:24:3.23:3,0,544	0/0:3,0:3:2.99:0,3,23	0/1:6,0:5:10.94:11,0,146	1/1:8,0:8:1.80:7,2,0	0/0:5,0:5:9.03:0,9,144	0/0:2,0:2:6:0,6,56	0/0:3,0:3:5.98:0,6,46	0/0:3,0:3:2.97:0,3,20	0/1:2,2:4:11.64:50,0,12	0/0:17,0:16:7.08:0,7,70	0/0:10,0:10:7.08:0,7,76	0/1:10,0:11:2.44:2,0,116	0/0:14,0:14:19.63:0,20,216	0/0:6,0:4:2.54:0,3,21	./.	0/0:1,0:1:3.01:0,3,37	./.	0/1:7,0:7:59.73:60,0,86	0/1:6,0:6:48.43:92,0,48	0/0:16,0:16:17.92:0,18,142	0/0:4,0:4:8.95:0,9,79
chr10	96577846	.	CT	C	1561.03	PASS	AB=0.674;AC=40;AF=0.714;AN=56;BaseQRankSum=-1.212;DP=560;FS=2.693;HRun=17;HaplotypeScore=73.3515;InbreedingCoeff=0.2751;MQ=80.82;MQ0=8;MQRankSum=3.274;QD=4.09;ReadPosRankSum=1.627;VQSLOD=0.9305;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,2:38:15.21:92,15,0	1/1:3,3:7:7.79:38,8,0	0/0:49,0:19:14.32:0,14,71	0/0:62,0:34:5.58:0,6,71	0/1:7,10:19:12.21:112,0,12	1/1:5,8:15:15.64:78,16,0	1/1:6,10:17:11.03:57,11,0	0/1:15,6:24:8.27:85,0,8	0/1:8,15:25:1.22:71,0,1	1/1:13,2:19:10.18:95,10,0	1/1:5,4:9:10.67:56,11,0	1/1:14,2:18:23.38:117,23,0	0/1:7,0:9:13.83:14,0,14	1/1:2,11:14:13.68:72,14,0	1/1:1,14:18:23.58:116,24,0	1/1:6,1:12:11:40,11,0	0/0:21,0:41:42.99:0,43,349	0/0:15,0:25:43.90:0,44,287	1/1:7,12:19:32.43:180,32,0	1/1:7,1:9:10.70:55,11,0	1/1:5,1:10:7.81:38,8,0	0/1:5,3:9:4.34:68,0,4	1/1:2,2:12:7.29:39,7,0	1/1:2,10:14:10.07:46,10,0	0/1:3,3:7:13.06:28,0,13	1/1:7,9:18:27.20:144,27,0	0/1:11,13:24:25.31:67,0,25	0/1:7,6:14:13.02:25,0,13
chr10	96579077	.	CAGAAATT	C	960.30	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.115;DP=405;FS=19.246;HRun=0;HaplotypeScore=96.3061;InbreedingCoeff=0.9478;MQ=80.71;MQ0=2;MQRankSum=-6.295;QD=40.01;ReadPosRankSum=1.896;VQSLOD=1.5748;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.22:0,63,2224	0/0:13,0:13:36.12:0,36,1323	0/0:17,0:15:36.05:0,36,862	0/0:11,0:10:27.04:0,27,550	0/0:15,0:15:45.15:0,45,1782	0/0:25,0:25:75.24:0,75,2722	0/0:9,0:9:24.08:0,24,769	0/0:28,0:28:81.27:0,81,2941	0/0:10,0:10:27.09:0,27,1022	0/0:12,0:12:36.12:0,36,1355	0/0:12,0:12:36.12:0,36,1439	0/0:15,0:15:45.15:0,45,1738	0/0:14,0:14:42.14:0,42,1459	0/0:13,0:13:33.11:0,33,1151	0/0:15,0:15:45.15:0,45,1687	0/0:4,0:4:12.04:0,12,435	1/1:1,14:14:30.10:768,30,0	1/1:2,7:9:12.04:309,12,0	0/0:29,0:29:81.28:0,81,2974	0/0:11,0:11:27.09:0,27,1065	0/0:5,0:5:12.04:0,12,450	0/0:7,0:7:21.07:0,21,770	0/0:16,0:16:45.15:0,45,1710	0/0:12,0:12:33.11:0,33,1025	0/0:13,0:13:39.12:0,39,1452	0/0:15,0:15:42.14:0,42,1656	0/0:26,0:26:75.22:0,75,2468	0/0:12,0:12:36.12:0,36,1174
chr10	96579609	.	CT	C	1472.79	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.166;DP=640;FS=9.436;HRun=2;HaplotypeScore=90.5155;InbreedingCoeff=0.9909;MQ=71.38;MQ0=0;MQRankSum=-2.443;QD=33.47;ReadPosRankSum=1.364;VQSLOD=3.2917;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,157,2296	0/0:5,0:5:15.05:0,15,218	0/0:20,0:18:51.17:0,51,749	0/0:20,0:20:60.19:0,60,830	0/0:25,0:25:60.19:0,60,874	0/0:15,0:15:45.13:0,45,637	0/0:36,0:36:99:0,102,1460	0/0:30,0:30:84.27:0,84,1209	0/0:23,0:23:66.22:0,66,988	0/0:25,0:25:72.20:0,72,1054	0/0:12,0:12:30.10:0,30,449	0/0:24,0:24:72.24:0,72,1054	0/0:22,0:22:63.20:0,63,923	0/0:26,0:26:72.24:0,72,1061	0/0:26,1:27:36.29:0,36,1001	0/0:15,0:15:42.13:0,42,610	1/1:1,26:26:78.18:975,78,0	1/1:1,16:17:48.16:619,48,0	0/0:21,0:21:60.20:0,60,899	0/0:21,0:21:63.16:0,63,898	0/0:41,0:41:99:0,111,1617	0/0:14,0:14:33.05:0,33,433	0/0:13,0:13:30.06:0,30,419	0/0:19,0:19:54.17:0,54,790	0/0:11,0:11:33.11:0,33,495	0/0:37,0:37:99:0,108,1568	0/0:28,0:28:81.27:0,81,1205	0/0:11,0:11:33.11:0,33,494
chr10	96579669	.	CTA	C	18712.46	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.678;DP=549;FS=8.692;HRun=0;HaplotypeScore=78.4066;InbreedingCoeff=0.9717;MQ=73.33;MQ0=0;MQRankSum=-8.610;QD=36.33;ReadPosRankSum=6.478;VQSLOD=7.0083;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,43:43:99:1718,120,0	1/1:0,6:6:18.06:257,18,0	0/0:18,0:18:48.12:0,48,778	0/0:16,0:16:42.13:0,42,653	1/1:0,25:25:54.16:773,54,0	1/1:1,16:17:45.15:644,45,0	1/1:2,31:33:81.27:1160,81,0	1/1:2,16:18:48.15:669,48,0	1/1:2,16:18:48.16:687,48,0	1/1:1,20:21:57.19:816,57,0	1/1:0,13:13:27.09:387,27,0	1/1:0,17:17:51.17:730,51,0	1/1:1,19:20:45.15:645,45,0	1/1:0,22:22:57.19:816,57,0	1/1:1,21:22:54.18:772,54,0	1/1:2,19:21:51.17:730,51,0	1/1:2,27:28:69.23:987,69,0	1/1:2,13:15:42.14:599,42,0	1/1:4,14:18:42.13:584,42,0	1/1:0,21:21:57.19:816,57,0	1/1:1,28:29:78.26:1117,78,0	1/1:1,17:18:42.14:601,42,0	1/1:0,13:13:30.10:430,30,0	1/1:0,15:15:42.14:601,42,0	1/1:1,6:7:15.05:215,15,0	1/1:1,23:24:66.15:885,66,0	1/1:2,24:26:63.21:902,63,0	1/1:0,4:4:12.04:172,12,0
chr10	96579856	.	C	CT	2577.91	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-9.411;DP=525;FS=1.510;HRun=8;HaplotypeScore=61.6308;InbreedingCoeff=0.8776;MQ=58.32;MQ0=9;MQRankSum=-2.305;QD=19.68;ReadPosRankSum=-2.919;VQSLOD=2.7450;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:71.86:0,72,645	0/0:5,0:5:12.01:0,12,110	0/1:7,0:7:14.05:14,0,29	0/0:9,0:9:10.54:0,11,71	0/0:31,0:31:50.97:0,51,456	0/0:17,0:17:33:0,33,302	0/0:24,0:24:44.04:0,44,390	1/1:17,19:35:44.69:736,45,0	0/0:17,0:17:39.01:0,39,356	0/0:17,0:17:39.01:0,39,357	0/0:21,0:21:42.01:0,42,384	0/0:18,0:18:39.01:0,39,357	0/0:17,0:17:26.85:0,27,247	0/0:13,0:13:27:0,27,247	0/0:16,0:16:33.48:0,33,301	0/0:12,0:12:30.01:0,30,275	0/0:24,0:20:50.93:0,51,448	0/0:13,0:9:15:0,15,137	1/1:6,11:16:36.08:395,36,0	1/1:3,9:12:27.04:297,27,0	1/1:4,18:22:42.12:483,42,0	0/0:18,0:15:27.01:0,27,247	0/0:8,0:8:11.99:0,12,110	0/0:25,0:25:53.98:0,54,487	0/0:18,0:18:39:0,39,357	0/0:33,0:32:63.01:0,63,576	1/1:3,24:26:60.13:669,60,0	1/1:5,5:9:15.04:173,15,0
chr10	96580144	.	GT	G	663.87	PASS	AB=0.909;AC=5;AF=0.089;AN=56;BaseQRankSum=-0.550;DP=502;FS=5.881;HRun=8;HaplotypeScore=85.1631;InbreedingCoeff=0.6769;MQ=66.33;MQ0=6;MQRankSum=0.433;QD=15.44;ReadPosRankSum=3.963;VQSLOD=3.7856;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:72.21:0,72,859	0/0:5,0:5:11.97:0,12,127	0/0:31,0:14:1.66:0,2,242	0/0:29,0:15:6.02:0,6,185	0/0:25,0:24:57.17:0,57,683	0/0:7,0:7:18.05:0,18,215	0/0:15,0:15:27.04:0,27,309	0/0:32,0:32:55.29:0,55,917	0/0:15,0:15:14.98:0,15,163	0/0:23,0:23:48.09:0,48,545	0/0:22,0:22:54.11:0,54,630	0/0:9,0:9:24.07:0,24,290	0/0:10,0:10:18.05:0,18,207	0/0:17,0:17:39.12:0,39,468	0/0:11,0:11:21.06:0,21,254	0/0:11,0:11:33.08:0,33,377	1/1:0,17:17:48.08:463,48,0	1/1:1,15:16:33.05:319,33,0	0/0:28,0:27:78.24:0,78,941	0/0:18,0:19:57.02:0,57,645	0/0:13,0:13:27.08:0,27,326	0/1:9,1:10:7.84:8,0,188	0/0:18,0:18:26.61:0,27,301	0/0:12,0:12:15.03:0,15,170	0/0:14,0:14:27.08:0,27,326	0/0:24,0:24:69.15:0,69,803	0/0:25,0:25:72.19:0,72,836	0/0:13,0:13:33.10:0,33,398
chr10	96580165	.	G	GTTTT	5341.67	PASS	AB=0.713;AC=34;AF=0.607;AN=56;BaseQRankSum=8.926;DP=521;FS=2.439;HRun=9;HaplotypeScore=106.0891;InbreedingCoeff=0.6229;MQ=60.30;MQ0=6;MQRankSum=-1.312;QD=15.66;ReadPosRankSum=-0.460;VQSLOD=1.8333;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:31:28.13:358,0,28	1/1:3,0:9:17.97:147,18,0	0/0:23,0:10:8.95:0,9,130	0/1:30,0:18:4.95:5,0,137	0/1:19,0:31:29.90:430,0,30	1/1:1,7:11:15.05:300,15,0	1/1:8,11:21:21.54:360,22,0	0/0:30,0:31:57.55:0,58,773	1/1:2,11:15:12.04:241,12,0	1/1:9,1:20:38.77:429,39,0	1/1:3,18:24:50:736,50,0	1/1:6,2:9:14.46:274,14,0	1/1:3,0:12:9.03:200,9,0	1/1:7,7:15:13.60:259,14,0	1/1:3,0:14:1.79:128,2,0	1/1:0,0:9:23.69:167,24,0	0/0:20,0:20:37.24:0,37,611	0/0:15,0:16:36.06:0,36,479	0/0:25,0:24:57.06:0,57,704	0/0:19,0:19:54.17:0,54,758	0/0:13,0:13:30.09:0,30,413	1/1:6,9:14:23.95:291,24,0	1/1:6,13:20:21.07:354,21,0	1/1:2,8:10:2.07:70,2,0	0/1:4,0:17:16.35:182,0,16	1/1:8,1:26:11.53:411,12,0	0/0:25,0:25:69.18:0,69,985	0/0:7,0:7:9.01:0,9,128
chr10	96580174	.	TG	T	2458.57	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=11.606;DP=478;FS=1.275;HRun=1;HaplotypeScore=81.9996;InbreedingCoeff=0.8934;MQ=58.02;MQ0=2;MQRankSum=-2.038;QD=8.39;ReadPosRankSum=0.415;VQSLOD=0.9522;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:43.66:328,44,0	1/1:10,0:10:25.14:139,25,0	0/0:17,0:10:20.20:0,20,255	0/0:18,1:13:19.22:0,19,300	1/1:29,2:30:47.75:330,48,0	1/1:11,0:10:12.98:55,13,0	1/1:13,3:16:20.40:106,20,0	0/0:31,0:31:72.02:0,72,945	1/1:14,1:15:13.85:76,14,0	1/1:14,3:17:28.52:188,29,0	1/1:24,1:25:43.34:252,43,0	1/1:8,0:8:0.20:51,0,0	1/1:11,0:11:4.99:20,5,0	1/1:10,0:10:6.98:64,7,0	1/1:13,0:13:20.52:120,21,0	1/1:10,0:10:26.38:164,26,0	0/0:19,0:19:51.05:0,51,608	0/0:14,0:14:29.15:0,29,442	0/0:23,0:23:66.10:0,66,771	0/0:18,0:18:53.85:0,54,703	0/0:15,0:15:39.08:0,39,472	1/1:11,3:13:17.30:107,17,0	1/1:12,5:17:20.67:137,21,0	1/1:9,0:9:5.46:35,5,0	1/1:17,1:18:18.02:153,18,0	1/1:24,1:25:52.76:348,53,0	0/0:25,0:25:75.23:0,75,988	0/0:3,0:3:9.03:0,9,113
chr10	96580345	.	TTTGTTGTTGTTG	T	6775.84	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=-1.089;DP=537;FS=4.511;HRun=0;HaplotypeScore=214.2629;InbreedingCoeff=0.8106;MQ=71.42;MQ0=4;MQRankSum=-9.649;QD=36.63;ReadPosRankSum=1.726;VQSLOD=3.9801;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:84.11:0,84,3857	0/0:2,0:7:14.96:0,15,165	0/0:26,0:21:21.07:0,21,867	0/0:23,0:22:21.06:0,21,543	0/0:8,0:34:81.18:0,81,1120	1/1:3,10:13:15.05:528,15,0	1/1:7,13:20:21.07:739,21,0	0/0:24,0:34:57.12:0,57,1216	1/1:1,13:14:24.08:844,24,0	1/1:6,9:15:21.07:739,21,0	1/1:3,9:11:14.97:439,15,0	1/1:6,8:14:15.05:526,15,0	1/1:5,8:13:12.04:422,12,0	1/1:5,17:22:33.11:1104,33,0	0/0:4,0:21:54.14:0,54,640	0/0:10,0:10:18.02:0,18,546	0/1:15,0:15:72.58:133,0,73	0/1:10,0:10:81.70:85,0,82	0/0:20,0:29:50.99:0,51,1164	0/0:4,0:20:50.84:0,51,1462	0/0:8,0:21:45.12:0,45,1198	1/1:4,8:12:20.90:562,21,0	1/1:4,9:13:20.54:549,21,0	1/1:4,8:12:3:106,3,0	0/0:7,0:21:32.80:0,33,379	0/0:2,0:22:60.17:0,60,867	0/0:10,0:34:66.14:0,66,1941	0/0:1,0:13:36.11:0,36,1097
chr10	96580353	.	TGTTGTTG	T	3175.44	PASS	AB=0.963;AC=20;AF=0.357;AN=56;BaseQRankSum=14.563;DP=516;FS=2.764;HRun=0;HaplotypeScore=168.8578;InbreedingCoeff=-0.2480;MQ=61.99;MQ0=4;MQRankSum=-14.580;QD=11.85;ReadPosRankSum=6.463;VQSLOD=2.4017;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,3564	0/1:7,0:7:38.83:39,0,117	0/0:26,0:20:60.20:0,60,1421	0/0:22,0:21:63.13:0,63,1115	0/1:31,0:31:99:143,0,333	1/1:11,0:11:15.05:218,15,0	0/1:18,0:18:99:268,0,176	0/0:31,0:31:90.30:0,90,1489	1/1:13,0:13:24.08:348,24,0	0/1:13,0:13:99:271,0,137	0/1:11,0:10:99:147,0,176	0/1:12,0:12:98.17:189,0,98	0/1:11,0:11:87.94:153,0,88	0/1:21,0:21:99:390,0,132	0/1:19,0:19:38.63:186,0,39	0/0:11,0:11:33.11:0,33,793	0/1:8,5:13:41.22:222,0,41	0/1:5,4:9:51.08:169,0,51	0/0:28,0:27:81.26:0,81,1269	0/0:20,0:20:57.19:0,57,930	0/0:22,0:22:60.20:0,60,933	0/1:12,0:12:99:185,0,221	0/1:13,0:13:99:143,0,111	0/1:11,0:11:31.55:32,0,109	0/1:21,0:21:86.38:86,0,224	0/1:22,0:22:99:160,0,158	0/0:34,0:34:87.27:0,87,1357	0/0:15,0:15:42.14:0,42,641
chr10	96580588	.	T	TC	448.62	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=-1.474;DP=362;FS=0.000;HRun=1;HaplotypeScore=77.1789;InbreedingCoeff=0.8913;MQ=48.52;MQ0=5;MQRankSum=-2.243;QD=16.62;ReadPosRankSum=0.583;VQSLOD=3.6543;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:17:29.82:352,30,0	0/0:10,0:10:21.05:0,21,244	./.	0/0:7,0:3:0:0,0,0	0/0:19,0:19:27.03:0,27,301	0/0:9,0:7:15.05:0,15,190	0/0:16,0:13:32.87:0,33,310	0/0:19,0:19:50.77:0,51,572	0/0:14,0:14:39.05:0,39,430	0/0:17,0:16:38.87:0,39,439	0/0:14,0:13:23.86:0,24,270	0/0:9,0:9:24.06:0,24,276	0/0:10,0:9:20.99:0,21,215	0/0:12,0:12:35.89:0,36,364	0/0:10,0:10:18.06:0,18,231	1/1:0,10:10:15.05:214,15,0	0/0:13,0:13:29.87:0,30,288	0/0:7,0:7:20.94:0,21,191	0/0:18,0:18:51.09:0,51,609	0/0:17,0:17:45.13:0,45,553	0/0:7,0:6:18.02:0,18,187	0/0:13,0:13:17.83:0,18,175	0/0:18,0:17:30.05:0,30,353	0/0:10,0:10:20.96:0,21,222	0/0:15,0:15:27.03:0,27,303	0/0:15,0:15:36.08:0,36,416	0/0:22,0:21:48.15:0,48,615	0/0:12,0:12:27.03:0,27,300
chr10	96580786	.	T	TG	251.79	PASS	AB=0.756;AC=2;AF=0.036;AN=56;BaseQRankSum=5.841;DP=791;FS=5.564;HRun=3;HaplotypeScore=119.1474;InbreedingCoeff=-0.0393;MQ=56.37;MQ0=12;MQRankSum=-4.256;QD=5.60;ReadPosRankSum=-0.391;VQSLOD=0.2090;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,116,1344	0/0:12,0:12:28.33:0,28,327	0/0:44,0:23:53.80:0,54,612	0/0:46,0:25:71.85:0,72,792	0/0:21,0:21:42.13:0,42,504	0/0:21,0:21:54.15:0,54,636	0/0:38,0:38:99:0,108,1281	0/0:29,0:30:83.06:0,83,968	0/0:30,0:30:87.27:0,87,1044	0/0:36,0:36:93.29:0,93,1116	0/0:19,0:19:29.27:0,29,359	0/0:43,0:43:99:0,105,1245	0/0:17,0:17:48.13:0,48,562	0/0:27,0:27:75.23:0,75,899	0/0:13,0:13:36.11:0,36,431	0/0:32,0:32:87.27:0,87,1044	0/1:17,5:22:99:213,0,214	0/1:13,10:23:99:128,0,293	0/0:19,0:18:51.15:0,51,602	0/0:20,0:20:45.14:0,45,540	0/0:79,0:79:99:0,223,2650	0/0:31,0:30:39.05:0,39,456	0/0:14,0:14:23.88:0,24,288	0/0:21,0:21:57.13:0,57,667	0/0:21,0:21:38.67:0,39,467	0/0:45,0:44:99:0,117,1386	0/0:19,0:19:48.11:0,48,550	0/0:3,0:3:9.03:0,9,108
chr10	96582367	.	TA	T	715.19	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.498;DP=503;FS=16.009;HRun=6;HaplotypeScore=54.6019;InbreedingCoeff=0.9803;MQ=67.36;MQ0=0;MQRankSum=-0.201;QD=26.49;ReadPosRankSum=0.818;VQSLOD=2.2544;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.23:0,78,997	0/0:10,0:10:30.10:0,30,395	0/0:12,0:11:21.68:0,22,246	0/0:15,0:13:22.74:0,23,236	0/0:16,0:16:45.08:0,45,570	0/0:19,0:19:54.09:0,54,661	0/0:24,0:24:69.12:0,69,869	0/0:25,0:25:63.20:0,63,816	0/0:14,0:14:36.11:0,36,458	0/0:15,0:15:42.14:0,42,552	0/0:18,0:18:51.17:0,51,670	0/0:12,0:12:33.10:0,33,416	0/0:18,0:18:45.12:0,45,563	0/0:20,0:20:51.16:0,51,665	0/0:24,0:24:57.18:0,57,736	0/0:16,0:16:45.09:0,45,566	1/1:0,15:15:42.11:450,42,0	1/1:0,12:12:36.09:386,36,0	0/0:33,0:33:87.28:0,87,1145	0/0:28,0:28:75.23:0,75,971	0/0:17,0:17:45.10:0,45,548	0/0:5,0:5:12.04:0,12,157	0/0:15,0:15:42.11:0,42,523	0/0:22,0:22:60.20:0,60,789	0/0:13,0:13:30.10:0,30,395	0/0:28,0:28:72.22:0,72,921	0/0:17,0:17:51.11:0,51,636	0/0:12,0:12:36.12:0,36,474
chr10	96582750	.	T	TA	1217.28	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.562;DP=594;FS=4.830;HRun=8;HaplotypeScore=60.0520;InbreedingCoeff=0.9388;MQ=69.74;MQ0=1;MQRankSum=-1.014;QD=27.67;ReadPosRankSum=-0.739;VQSLOD=4.0929;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:48.02:0,48,439	0/0:11,0:11:30.02:0,30,275	0/0:10,0:8:11.49:0,11,120	0/0:17,0:9:6.88:0,7,55	0/0:32,0:32:81.04:0,81,741	0/0:24,0:24:63.01:0,63,572	0/0:18,0:18:51.01:0,51,461	0/0:28,0:28:59.98:0,60,543	0/0:19,0:19:53.99:0,54,483	0/0:26,0:25:72.04:0,72,659	0/0:22,0:22:54.02:0,54,494	0/0:22,0:22:60.03:0,60,549	0/0:24,0:24:69.02:0,69,627	0/0:25,0:25:57.01:0,57,517	0/0:30,0:30:81.02:0,81,737	0/0:15,0:15:39.02:0,39,357	1/1:1,20:21:57.17:658,57,0	1/1:2,21:23:60.17:681,60,0	0/0:23,0:23:59.01:0,59,523	0/0:29,0:29:87.02:0,87,790	0/0:24,0:24:50.96:0,51,454	0/0:10,0:10:27.01:0,27,247	0/0:25,0:25:60:0,60,545	0/0:23,0:23:63.03:0,63,577	0/0:17,0:17:45:0,45,406	0/0:27,0:27:75.02:0,75,680	0/0:17,0:17:50.25:0,50,446	0/0:13,0:13:39.02:0,39,357
chr10	96584125	.	CTGCGTGCG	C	5885.28	PASS	AC=36;AF=0.750;AN=48;BaseQRankSum=-5.577;DP=455;FS=5.526;HRun=0;HaplotypeScore=106.8604;InbreedingCoeff=0.7372;MQ=55.45;MQ0=4;MQRankSum=-5.742;QD=21.17;ReadPosRankSum=-0.844;VQSLOD=3.8710;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,9:22:6.02:113,6,0	1/1:0,4:4:9.03:223,9,0	./.	./.	1/1:5,6:11:12.04:208,12,0	1/1:4,12:16:15.05:317,15,0	1/1:12,20:32:39.13:827,39,0	0/0:6,0:7:2.74:0,3,12	1/1:14,11:25:30.10:754,30,0	1/1:6,4:9:12.01:250,12,0	1/1:4,4:8:3.01:34,3,0	1/1:8,8:15:6.02:149,6,0	1/1:3,5:8:5.58:147,6,0	1/1:6,15:21:18.06:447,18,0	1/1:5,5:10:9.03:221,9,0	1/1:6,10:16:18.06:421,18,0	1/1:16,10:26:12.04:279,12,0	1/1:10,11:21:18.06:456,18,0	0/0:22,0:26:12.57:0,13,90	0/0:1,0:4:5.87:0,6,46	0/0:36,0:64:44.02:0,44,358	1/1:3,1:4:9.03:186,9,0	./.	./.	1/1:4,8:12:9.03:189,9,0	1/1:14,2:16:30.09:664,30,0	0/0:4,0:11:17.97:0,18,147	0/0:2,0:5:5.90:0,6,40
chr10	96584240	.	GT	G	10288.56	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=8.115;DP=459;FS=6.940;HRun=1;HaplotypeScore=54.0229;InbreedingCoeff=0.9862;MQ=71.20;MQ0=0;MQRankSum=0.334;QD=37.28;ReadPosRankSum=3.542;VQSLOD=5.0303;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:99:1380,102,0	1/1:0,4:4:9.03:126,9,0	0/0:12,0:12:36.09:0,36,507	0/0:18,0:17:48.15:0,48,732	1/1:0,16:16:45.15:628,45,0	1/1:0,10:10:24.08:335,24,0	1/1:0,27:27:75.25:1047,75,0	0/0:23,0:23:69.24:0,69,1099	1/1:0,11:11:30.10:419,30,0	1/1:0,20:20:60.20:838,60,0	1/1:0,14:14:42.14:580,42,0	1/1:1,11:12:36.12:491,36,0	1/1:0,9:9:18.06:252,18,0	1/1:0,12:12:24.08:335,24,0	1/1:0,9:9:27.09:377,27,0	1/1:0,14:14:42.14:586,42,0	0/0:22,0:22:63.20:0,63,951	0/0:13,0:13:39.04:0,39,565	0/0:21,0:21:60.18:0,60,915	0/0:9,0:9:27.09:0,27,428	0/0:39,0:39:99:0,114,1766	1/1:0,6:6:15.05:210,15,0	1/1:0,9:9:24.08:336,24,0	1/1:0,27:27:66.22:922,66,0	1/1:5,20:25:66.18:901,66,0	1/1:0,13:13:39.11:526,39,0	0/0:8,0:8:24.08:0,24,383	0/0:18,0:18:54.18:0,54,862
chr10	96584287	.	C	CAAG	301.70	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.485;DP=384;FS=3.633;HRun=0;HaplotypeScore=93.7723;InbreedingCoeff=0.9026;MQ=63.93;MQ0=4;MQRankSum=-3.645;QD=37.71;ReadPosRankSum=1.697;VQSLOD=4.2485;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.16:0,60,1071	0/0:7,0:7:18.06:0,18,316	0/0:22,0:14:36.12:0,36,629	0/0:14,0:9:21.53:0,22,327	0/0:15,0:15:36.12:0,36,671	0/0:15,0:14:33.11:0,33,609	0/0:21,0:21:54.19:0,54,1004	0/0:30,0:29:81.27:0,81,1466	0/0:13,0:13:33.11:0,33,586	0/0:16,0:16:45.62:0,46,811	0/0:10,0:10:30.10:0,30,548	0/0:8,0:8:24.08:0,24,447	0/0:10,0:10:21.03:0,21,352	0/0:11,0:10:24.05:0,24,404	0/0:5,0:5:15.05:0,15,277	0/0:11,0:11:30.10:0,30,559	1/1:2,2:4:12.04:225,12,0	1/1:1,3:4:9.03:185,9,0	0/0:29,0:28:81.28:0,81,1475	0/0:4,0:4:12.04:0,12,205	0/0:17,0:17:48.15:0,48,864	0/0:4,0:4:12.04:0,12,223	0/0:9,0:9:24.08:0,24,446	0/0:15,0:15:42.14:0,42,783	0/0:16,0:16:42.62:0,43,784	0/0:14,0:14:39.13:0,39,723	0/0:15,0:15:39.13:0,39,710	0/0:23,0:23:60.20:0,60,1080
chr10	96584289	.	T	TTTTC	3525.93	PASS	AB=1.000;AC=47;AF=0.940;AN=50;BaseQRankSum=-1.696;DP=417;FS=0.000;HRun=0;HaplotypeScore=102.8189;InbreedingCoeff=0.2745;MQ=61.52;MQ0=6;MQRankSum=1.477;QD=10.19;ReadPosRankSum=-1.404;VQSLOD=2.0843;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:17.96:228,18,0	1/1:9,0:8:17.87:192,18,0	./.	./.	1/1:20,0:18:26.82:265,27,0	1/1:14,0:13:8.82:54,9,0	1/1:23,0:21:5.99:48,6,0	./.	1/1:13,0:13:14.91:198,15,0	1/1:19,0:18:12:177,12,0	1/1:13,0:12:11.95:94,12,0	1/1:9,0:8:5.88:36,6,0	1/1:11,0:10:8.63:48,9,0	1/1:12,0:10:8.63:85,9,0	1/1:5,0:5:5.87:35,6,0	1/1:12,0:12:3.01:40,3,0	0/0:4,0:4:1.55:0,2,4	0/1:3,0:3:0:0,0,0	1/1:20,8:27:23.97:492,24,0	1/1:3,2:6:6.02:107,6,0	1/1:16,0:16:5.92:39,6,0	1/1:5,0:5:5.85:34,6,0	1/1:11,0:9:14.85:149,15,0	1/1:15,0:15:5.85:34,6,0	1/1:21,0:20:20.87:241,21,0	1/1:16,0:14:11.93:111,12,0	1/1:8,7:16:18.06:411,18,0	1/1:15,9:24:18.06:410,18,0
chr10	96584325	.	C	CT	1121.35	PASS	AB=0.703;AC=5;AF=0.093;AN=54;BaseQRankSum=0.151;DP=368;FS=2.399;HRun=3;HaplotypeScore=69.9603;InbreedingCoeff=-0.0637;MQ=47.28;MQ0=19;MQRankSum=1.680;QD=13.67;ReadPosRankSum=1.119;VQSLOD=2.7167;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:57.78:0,58,638	0/1:6,5:10:99:133,0,123	./.	0/0:5,0:2:1.82:0,2,5	0/1:14,6:18:99:203,0,268	0/0:15,0:14:33.10:0,33,395	0/0:12,0:9:24.07:0,24,286	0/0:29,0:17:45.11:0,45,518	0/0:11,0:11:24.13:0,24,263	0/0:15,0:13:35.98:0,36,386	0/0:14,0:13:39.12:0,39,464	0/0:8,0:7:18.06:0,18,215	0/0:10,0:9:18.06:0,18,215	0/0:11,0:9:20.80:0,21,228	0/1:5,2:7:85.24:85,0,122	0/0:10,0:10:27.07:0,27,311	0/0:11,0:10:24.04:0,24,277	0/0:7,0:7:21.06:0,21,251	0/0:20,0:15:26.91:0,27,309	0/0:5,0:5:9.02:0,9,102	0/0:6,0:6:15.03:0,15,167	0/0:6,0:6:12.04:0,12,143	0/0:11,0:9:25.63:0,26,290	0/0:13,0:13:39.12:0,39,467	0/1:9,18:25:99:620,0,146	0/1:9,8:15:99:196,0,245	0/0:12,0:12:10.27:0,10,112	0/0:25,0:24:43.68:0,44,508
chr10	96584344	.	TC	T	498.81	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.108;DP=347;FS=2.022;HRun=1;HaplotypeScore=69.9456;InbreedingCoeff=0.8218;MQ=49.29;MQ0=8;MQRankSum=-4.786;QD=22.67;ReadPosRankSum=-1.391;VQSLOD=3.3517;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:60.03:0,60,668	0/0:10,0:9:26.71:0,27,244	0/0:7,0:2:6.01:0,6,61	0/0:5,0:1:0.47:0,0,1	0/0:22,0:20:56.88:0,57,578	0/0:18,0:17:45.04:0,45,453	0/0:10,0:7:18.03:0,18,188	0/0:24,0:19:46.45:0,46,556	0/0:12,0:12:32.83:0,33,310	0/0:13,0:12:32.78:0,33,377	0/0:14,0:13:39.04:0,39,431	0/0:8,0:7:21.05:0,21,228	0/0:7,0:6:18.04:0,18,196	0/0:9,0:7:20.91:0,21,213	0/0:5,0:5:14.98:0,15,159	0/0:10,0:10:26.99:0,27,280	1/1:3,9:11:29.94:329,30,0	1/1:2,8:10:20.85:289,21,0	0/0:16,0:14:41.98:0,42,414	0/0:6,0:6:15.03:0,15,179	0/0:4,0:4:8.97:0,9,90	0/0:4,0:4:8.95:0,9,78	0/0:9,0:7:20.87:0,21,167	0/0:12,0:12:29.79:0,30,274	0/0:23,0:22:63.16:0,63,741	0/0:17,0:15:45.12:0,45,517	0/0:16,0:16:38.92:0,39,367	0/0:22,0:22:51.09:0,51,558
chr10	96584352	.	TAG	T	340.50	PASS	AB=0.813;AC=12;AF=0.214;AN=56;BaseQRankSum=5.472;DP=317;FS=16.284;HRun=0;HaplotypeScore=66.3442;InbreedingCoeff=-0.2796;MQ=53.40;MQ0=5;MQRankSum=-4.569;QD=2.68;ReadPosRankSum=-2.412;VQSLOD=0.0458;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,2:21:24.49:24,0,859	0/1:5,1:5:25.62:26,0,205	0/0:8,0:2:6.02:0,6,96	0/0:7,0:3:6.02:0,6,72	0/1:15,1:15:0.69:1,0,695	0/1:13,6:18:89.32:89,0,663	0/0:7,0:6:18.06:0,18,314	0/0:27,0:25:72.25:0,72,1315	0/1:8,2:10:13.48:13,0,397	0/1:14,1:14:6.90:7,0,618	0/0:12,1:12:33.07:0,33,561	0/1:6,2:7:70.56:71,0,226	0/1:5,2:6:73.52:74,0,192	0/1:6,2:6:20.53:21,0,255	0/0:5,0:5:15.05:0,15,263	0/0:10,0:10:27.09:0,27,488	0/0:9,0:9:13.65:0,14,187	0/0:9,0:9:26.45:0,26,345	0/0:18,0:17:11.28:0,11,734	0/0:6,0:6:15.05:0,15,278	0/0:2,0:2:3.01:0,3,56	0/1:1,1:2:39.77:40,0,49	0/1:3,2:3:46.36:77,0,46	0/1:6,3:9:41.93:42,0,256	0/0:21,0:21:60.21:0,60,1098	0/0:12,0:10:30.10:0,30,535	0/0:17,0:17:42.14:0,42,747	0/0:18,0:18:51.17:0,51,935
chr10	96584363	.	AT	A	471.80	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.210;DP=330;FS=6.774;HRun=3;HaplotypeScore=60.0251;InbreedingCoeff=0.7688;MQ=55.97;MQ0=5;MQRankSum=-4.262;QD=20.51;ReadPosRankSum=-0.631;VQSLOD=2.6508;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:57.14:0,57,747	0/0:6,0:5:15.05:0,15,213	0/0:6,0:3:8.86:0,9,100	0/0:6,0:2:5.99:0,6,65	0/0:17,0:16:42.12:0,42,571	0/0:17,0:16:47.93:0,48,627	0/0:9,0:8:21.07:0,21,295	0/0:24,0:23:66.21:0,66,934	0/0:9,0:9:27.09:0,27,380	0/0:19,0:18:44.81:0,45,588	0/0:13,0:12:30.10:0,30,428	0/0:9,0:8:24.04:0,24,290	0/0:9,0:8:24.04:0,24,287	0/0:5,0:4:9.03:0,9,130	0/0:6,0:6:18.06:0,18,256	0/0:13,0:13:33.09:0,33,437	1/1:2,11:13:19.87:225,20,0	1/1:0,10:10:30.09:366,30,0	0/0:16,0:14:42.12:0,42,574	0/0:6,0:6:15.05:0,15,215	0/0:3,0:3:6.02:0,6,86	0/0:3,0:3:9.02:0,9,107	0/0:3,0:2:5.85:0,6,58	0/0:10,0:10:21.07:0,21,285	0/0:23,0:23:60.20:0,60,840	0/0:13,0:11:30.06:0,30,405	0/0:19,0:19:51.17:0,51,718	0/0:17,0:17:48.14:0,48,672
chr10	96584587	.	CA	C	1030.29	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.005;DP=478;FS=0.671;HRun=4;HaplotypeScore=55.8469;InbreedingCoeff=0.8865;MQ=75.49;MQ0=0;MQRankSum=-1.110;QD=23.42;ReadPosRankSum=0.069;VQSLOD=2.4565;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.30:0,96,1325	0/0:5,0:4:9.03:0,9,126	0/0:9,0:9:24.08:0,24,335	0/0:13,0:13:34.54:0,35,436	0/0:25,0:24:60.20:0,60,839	0/0:17,0:17:48.15:0,48,650	0/0:25,0:25:66.20:0,66,880	0/0:23,0:23:60.16:0,60,817	0/0:17,0:17:48.08:0,48,620	0/0:21,0:21:60.19:0,60,816	0/0:10,0:10:30.09:0,30,399	0/0:10,0:10:27.09:0,27,373	0/0:11,0:11:30.06:0,30,394	0/0:13,0:13:39.13:0,39,540	0/0:20,0:20:57.15:0,57,775	0/0:26,0:26:75.24:0,75,1032	1/1:2,25:27:60.18:720,60,0	1/1:1,16:17:36.11:432,36,0	0/0:15,0:15:42.14:0,42,587	0/0:16,0:16:48.16:0,48,672	0/0:9,0:9:27.08:0,27,361	0/0:7,0:7:21.07:0,21,290	0/0:9,0:9:21.06:0,21,276	0/0:17,0:17:48.16:0,48,665	0/0:18,0:18:54.18:0,54,756	0/0:24,0:24:69.22:0,69,949	0/0:27,0:27:72.24:0,72,1004	0/0:12,1:13:3.09:0,3,416
chr10	96584715	.	C	CT	3373.74	PASS	AB=0.716;AC=48;AF=0.857;AN=56;BaseQRankSum=-2.536;DP=459;FS=6.191;HRun=15;HaplotypeScore=52.4820;InbreedingCoeff=0.0487;MQ=59.64;MQ0=11;MQRankSum=0.694;QD=7.69;ReadPosRankSum=1.154;VQSLOD=2.5133;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:32:44.19:265,44,0	1/1:1,3:4:8.99:75,9,0	0/0:20,0:6:4.67:0,5,23	0/1:15,1:11:2.01:2,0,8	0/1:11,18:32:30.91:215,0,31	0/1:7,8:16:23.51:69,0,24	1/1:15,7:26:24.10:248,24,0	1/1:11,9:21:16.53:149,17,0	1/1:12,2:14:2.57:106,3,0	1/1:15,6:21:27.70:208,28,0	1/1:6,7:14:24.05:168,24,0	1/1:13,1:14:10.56:63,11,0	1/1:3,5:8:2.90:16,3,0	1/1:8,0:8:3.66:78,4,0	1/1:6,10:16:11.98:99,12,0	1/1:13,0:13:4.69:79,5,0	1/1:7,0:21:11.42:59,11,0	1/1:18,0:24:33.70:176,34,0	1/1:10,6:16:20.82:166,21,0	1/1:5,2:9:18.91:130,19,0	1/1:7,4:11:5.97:149,6,0	1/1:2,4:7:8.92:67,9,0	0/1:4,6:12:12.40:100,0,12	1/1:12,7:20:8.60:250,9,0	0/1:9,2:11:7.80:29,0,8	1/1:13,7:21:17.39:231,17,0	0/1:8,9:18:19.76:125,0,20	1/1:4,2:6:5.99:50,6,0
chr10	96584719	.	T	TC	895.32	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.362;DP=454;FS=3.856;HRun=0;HaplotypeScore=61.3788;InbreedingCoeff=0.8116;MQ=59.42;MQ0=13;MQRankSum=-2.895;QD=18.27;ReadPosRankSum=2.498;VQSLOD=5.9981;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,28:35:20.21:650,20,0	0/0:6,0:6:2.23:0,2,45	0/0:22,0:6:16.70:0,17,139	0/0:17,0:11:21.38:0,21,240	0/0:31,0:31:60.71:0,61,469	0/0:15,0:15:23.61:0,24,208	0/0:23,0:23:42.26:0,42,326	0/0:21,0:21:34.36:0,34,306	0/0:16,0:15:25.14:0,25,208	0/0:19,0:19:43.15:0,43,286	0/0:15,0:14:26.04:0,26,179	0/0:13,0:13:32.49:0,32,224	0/0:8,0:8:9.89:0,10,82	0/0:8,0:8:17.96:0,18,127	0/0:15,0:15:17.16:0,17,112	1/1:7,6:13:35.93:365,36,0	0/0:22,0:20:20.42:0,20,135	0/0:24,0:23:50.57:0,51,303	0/0:15,0:14:27.08:0,27,191	0/0:8,0:8:9.35:0,9,58	0/0:12,0:12:20.31:0,20,123	0/0:8,0:8:9.68:0,10,58	0/0:12,0:12:19.98:0,20,158	0/0:20,0:19:30.62:0,31,224	0/0:10,0:10:28.07:0,28,224	0/0:21,0:21:36.73:0,37,273	0/0:16,0:16:24.95:0,25,221	0/0:8,0:6:13.77:0,14,108
chr10	96584905	.	A	AT	1036.91	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.976;DP=434;FS=8.747;HRun=11;HaplotypeScore=52.1402;InbreedingCoeff=0.7774;MQ=56.05;MQ0=13;MQRankSum=1.862;QD=16.46;ReadPosRankSum=1.827;VQSLOD=4.2517;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:82.70:0,83,631	0/0:5,0:5:11.89:0,12,86	0/0:6,0:1:2.99:0,3,23	0/0:11,0:6:8.91:0,9,66	0/0:26,0:26:71.71:0,72,555	0/0:11,0:11:32.87:0,33,255	0/0:16,0:15:23.80:0,24,185	0/0:20,1:19:50.69:0,51,384	0/0:15,0:15:35.84:0,36,275	0/0:20,0:19:42.23:0,42,325	0/0:11,0:11:20.90:0,21,162	0/0:17,0:17:50.81:0,51,394	0/0:8,0:8:23.91:0,24,185	0/0:10,0:10:25.06:0,25,164	0/0:9,0:9:26.88:0,27,205	0/0:10,0:10:29.89:0,30,232	1/1:6,24:27:16.66:532,17,0	1/1:2,30:32:62.96:623,63,0	0/0:16,0:12:28.90:0,29,213	0/0:12,1:14:1.44:0,1,177	0/0:15,0:14:32.86:0,33,255	0/0:6,0:6:14.94:0,15,115	0/0:11,0:11:32.86:0,33,253	0/0:17,0:17:38.79:0,39,299	0/0:13,0:12:32.87:0,33,255	0/0:27,0:28:73.58:0,74,552	0/0:15,0:16:41.06:0,41,306	0/0:8,0:8:23.91:0,24,186
chr10	96585360	.	C	CCCT	2896.98	PASS	AB=0.988;AC=32;AF=0.615;AN=52;BaseQRankSum=-3.623;DP=214;FS=8.081;HRun=0;HaplotypeScore=133.9245;InbreedingCoeff=0.1115;MQ=50.30;MQ0=0;MQRankSum=-1.031;QD=17.35;ReadPosRankSum=-1.739;VQSLOD=2.7558;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:10:34.09:34,0,59	0/1:4,0:4:14.33:14,0,21	0/0:4,0:4:4.99:0,5,30	0/1:9,0:7:46.89:47,0,70	0/1:14,0:14:15.48:15,0,75	1/1:2,3:5:11.80:250,12,0	1/1:4,4:8:17.78:282,18,0	0/0:7,0:7:2.83:0,3,17	1/1:5,4:9:23.89:463,24,0	1/1:2,3:5:15.05:327,15,0	1/1:1,3:6:5.84:132,6,0	1/1:5,1:6:14.92:215,15,0	1/1:4,3:8:23.80:364,24,0	1/1:2,3:5:11.38:214,11,0	0/1:15,0:15:12.63:13,0,142	0/1:7,0:7:1.71:2,0,50	./.	./.	0/1:12,0:12:65.42:81,0,65	0/1:13,0:13:19.02:68,0,19	0/0:17,0:17:7.16:0,7,40	1/1:1,2:3:6.02:134,6,0	1/1:2,5:7:12.04:267,12,0	1/1:2,1:3:5.91:81,6,0	0/0:11,0:10:15.50:0,16,95	0/1:6,1:7:52.26:52,0,53	0/1:10,0:10:11.74:12,0,96	0/0:7,0:7:20.45:0,20,120
chr10	96585735	.	TCTTC	T	7470.20	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=5.861;DP=593;FS=6.407;HRun=0;HaplotypeScore=121.6669;InbreedingCoeff=0.8216;MQ=53.33;MQ0=2;MQRankSum=0.112;QD=30.24;ReadPosRankSum=2.669;VQSLOD=4.4392;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:75.17:0,75,1567	0/0:2,0:2:3.01:0,3,31	0/0:26,0:14:26.80:0,27,370	0/0:22,0:18:9.02:0,9,296	0/0:30,0:30:52.73:0,53,664	1/1:14,13:27:66.19:1039,66,0	1/1:11,6:16:33:423,33,0	0/0:35,0:34:56.97:0,57,944	1/1:12,7:19:48.07:677,48,0	1/1:4,24:28:69.04:985,69,0	1/1:9,4:13:30.05:437,30,0	1/1:10,12:22:57.14:881,57,0	1/1:13,10:22:51.09:752,51,0	1/1:9,9:18:51.09:756,51,0	0/0:20,0:20:29.06:0,29,316	0/0:21,0:21:60.08:0,60,1106	0/1:16,0:15:76.88:77,0,113	0/1:20,0:19:99:210,0,99	0/0:20,0:20:42:0,42,748	0/0:19,0:19:54.03:0,54,1129	0/0:25,0:25:54.09:0,54,996	1/1:9,7:16:38.44:493,38,0	1/1:4,5:9:23.96:343,24,0	1/1:11,8:19:29.97:397,30,0	0/0:15,0:15:27.03:0,27,356	0/0:25,0:25:55.20:0,55,740	0/0:27,0:27:66.10:0,66,1167	0/0:22,0:22:65.98:0,66,1138
chr10	96585751	.	CCTTT	C	3730.87	PASS	AB=0.993;AC=21;AF=0.375;AN=56;BaseQRankSum=8.180;DP=581;FS=5.471;HRun=0;HaplotypeScore=134.9956;InbreedingCoeff=0.3293;MQ=52.82;MQ0=9;MQRankSum=-1.960;QD=13.18;ReadPosRankSum=3.714;VQSLOD=2.8279;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:78.10:0,78,1568	0/0:5,0:5:10.47:0,10,42	0/0:30,0:9:12.39:0,12,157	0/1:28,0:13:12.71:13,0,274	0/0:30,0:29:16.60:0,17,265	1/1:24,0:24:18:488,18,0	0/1:14,0:13:18.12:149,0,18	0/0:26,0:25:42.12:0,42,789	0/1:20,0:20:30.98:255,0,31	1/1:27,0:27:0.59:319,1,0	0/1:14,0:14:37:179,0,37	1/1:20,0:20:48:460,48,0	1/1:20,0:19:38.99:365,39,0	1/1:18,0:17:39.02:385,39,0	0/1:18,0:18:2.69:3,0,70	0/0:20,0:20:39.13:0,39,831	0/1:14,1:14:99:202,0,121	1/1:15,5:18:32.99:471,33,0	0/0:21,0:21:47.98:0,48,751	0/0:24,0:24:63.11:0,63,1230	0/0:23,0:23:45.10:0,45,855	0/1:15,0:15:0.21:168,0,0	0/1:11,0:11:46.29:136,0,46	0/1:19,0:19:53.90:138,0,54	0/0:12,0:12:25.04:0,25,174	0/0:22,0:22:14.80:0,15,297	0/0:25,0:25:48.12:0,48,898	0/0:24,0:24:56.88:0,57,966
chr10	96585760	.	C	CTT	1433.20	PASS	AB=0.917;AC=15;AF=0.268;AN=56;BaseQRankSum=6.869;DP=545;FS=2.001;HRun=3;HaplotypeScore=121.3339;InbreedingCoeff=-0.0851;MQ=53.07;MQ0=13;MQRankSum=-1.389;QD=6.43;ReadPosRankSum=-0.421;VQSLOD=-0.0006;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:87.25:0,87,1178	0/0:6,0:6:14.05:0,14,153	0/0:26,0:7:13.71:0,14,167	0/0:29,1:12:9.86:0,10,215	0/0:26,0:25:44.09:0,44,539	0/1:20,2:22:99:118,0,103	0/1:8,2:10:17.56:18,0,58	0/0:25,0:24:54.18:0,54,755	0/1:13,3:16:97.47:100,0,97	0/1:24,0:23:99:128,0,136	0/1:12,2:14:99:121,0,109	1/1:19,0:19:5.62:199,6,0	1/1:17,1:17:2.66:161,3,0	0/1:18,2:19:80.04:172,0,80	0/0:15,0:16:20.94:0,21,240	0/0:15,0:15:39.13:0,39,544	0/1:14,1:14:99:188,0,164	0/1:17,2:17:20.55:252,0,21	0/0:22,0:22:56.82:0,57,666	0/0:26,0:26:72.20:0,72,969	0/0:16,0:16:45.13:0,45,606	0/1:14,0:14:68.50:68,0,153	0/1:10,1:11:50.32:50,0,207	0/1:20,0:20:17.88:18,0,254	0/0:12,0:12:27.08:0,27,351	0/0:20,0:21:59.34:0,59,743	0/0:21,0:21:57.15:0,57,790	0/0:24,0:24:59.77:0,60,714
chr10	96585771	.	TTTTTC	T	2657.80	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=6.736;DP=534;FS=13.883;HRun=0;HaplotypeScore=132.9760;InbreedingCoeff=0.4283;MQ=49.62;MQ0=22;MQRankSum=-7.678;QD=11.36;ReadPosRankSum=3.339;VQSLOD=2.1638;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:93.23:0,93,2144	1/1:1,7:8:20.86:350,21,0	0/1:22,0:3:5.73:6,0,18	0/0:28,0:9:21.24:0,21,201	1/1:3,21:23:32.99:532,33,0	0/1:24,0:24:40.97:41,0,221	0/1:13,0:12:23.67:24,0,176	0/0:23,0:23:57.13:0,57,1140	0/1:16,0:16:56.41:56,0,179	0/0:23,0:21:10.72:0,11,408	0/0:15,0:14:14.14:0,14,205	0/1:20,0:20:25.04:25,0,111	0/1:14,0:13:9.17:9,0,113	0/0:17,0:16:13.45:0,13,250	1/1:3,16:18:18.06:348,18,0	0/0:15,0:15:42.47:0,42,844	0/1:18,0:15:41.74:42,0,55	1/1:22,0:20:6.05:206,6,0	0/0:18,0:17:45.10:0,45,842	0/0:28,0:28:77.83:0,78,1672	0/0:13,0:13:39.09:0,39,825	0/0:11,0:11:14.87:0,15,241	0/0:11,0:11:22.35:0,22,368	0/0:19,0:17:20.43:0,20,354	1/1:2,8:9:18.06:362,18,0	1/1:5,19:24:40.50:848,41,0	0/0:26,0:24:60.08:0,60,1321	0/0:17,0:17:50.35:0,50,878
chr10	96585772	.	TTTTC	T	1925.65	PASS	AB=0.979;AC=15;AF=0.268;AN=56;BaseQRankSum=3.941;DP=532;FS=0.463;HRun=0;HaplotypeScore=123.8723;InbreedingCoeff=0.7143;MQ=49.34;MQ0=25;MQRankSum=-4.984;QD=11.74;ReadPosRankSum=-0.229;VQSLOD=3.2631;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:93.26:0,93,1866	1/1:8,1:8:20.55:248,21,0	0/1:22,0:3:4.57:5,0,23	0/0:29,0:9:7.54:0,8,127	1/1:24,0:23:32.99:373,33,0	0/0:24,1:25:24.68:0,25,427	0/0:13,0:12:22.70:0,23,238	0/0:23,0:23:57.13:0,57,1019	0/0:16,0:16:20.77:0,21,276	0/0:21,0:19:22.53:0,23,451	0/1:14,1:14:13.75:14,0,246	0/0:19,0:19:7.71:0,8,187	0/0:14,0:13:25.61:0,26,206	0/0:16,0:15:44.01:0,44,408	1/1:20,0:18:18.06:234,18,0	0/0:15,0:15:42.59:0,43,779	0/1:18,0:15:72.71:73,0,73	1/1:21,1:20:34.15:314,34,0	0/0:18,0:17:45.11:0,45,755	0/0:28,0:28:76.50:0,77,1449	0/0:13,0:13:39.08:0,39,711	0/0:10,0:10:23.83:0,24,320	0/0:12,0:12:10.42:0,10,391	0/0:19,0:17:41.74:0,42,530	1/1:10,0:9:18.06:231,18,0	1/1:22,2:24:30.37:625,30,0	0/0:26,0:24:60.10:0,60,1173	0/0:15,0:15:44.86:0,45,743
chr10	96585773	.	TTTC	T	1939.32	PASS	AB=0.964;AC=16;AF=0.286;AN=56;BaseQRankSum=4.750;DP=529;FS=0.448;HRun=0;HaplotypeScore=114.7547;InbreedingCoeff=0.6618;MQ=49.19;MQ0=25;MQRankSum=-5.862;QD=9.84;ReadPosRankSum=-0.646;VQSLOD=3.2814;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:93.14:0,93,1537	1/1:9,0:8:19.26:192,19,0	0/1:21,0:2:11.80:12,0,21	0/1:29,0:9:4.70:5,0,79	1/1:24,0:23:32.97:327,33,0	0/0:24,0:24:24.19:0,24,379	0/0:13,0:12:24.59:0,25,241	0/0:24,0:24:60.07:0,60,896	0/0:15,0:15:27.36:0,27,234	0/0:21,0:19:43.39:0,43,461	0/0:15,0:14:10.52:0,11,199	0/1:19,0:19:18.57:19,0,143	0/0:14,0:13:16.47:0,16,158	0/0:16,0:15:35.04:0,35,322	1/1:20,0:18:18.05:201,18,0	0/0:15,0:15:42.57:0,43,662	0/1:15,3:15:36.56:177,0,37	1/1:18,5:20:41.90:477,42,0	0/0:17,0:16:45.10:0,45,656	0/0:28,0:28:74.09:0,74,1197	0/0:13,0:13:39.06:0,39,602	0/0:10,0:10:23.76:0,24,276	0/0:12,0:12:27.19:0,27,330	0/0:19,0:17:40.81:0,41,451	1/1:10,0:9:18.04:196,18,0	1/1:24,0:24:27.25:527,27,0	0/0:25,0:23:60.10:0,60,991	0/0:15,0:15:44.83:0,45,625
chr10	96585775	.	TC	T	1176.15	PASS	AB=0.912;AC=14;AF=0.250;AN=56;BaseQRankSum=4.829;DP=520;FS=2.130;HRun=1;HaplotypeScore=98.7525;InbreedingCoeff=0.7553;MQ=49.07;MQ0=25;MQRankSum=-5.230;QD=8.22;ReadPosRankSum=0.301;VQSLOD=0.8535;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:89.86:0,90,959	1/1:9,0:8:12:112,12,0	0/1:21,0:2:8.64:10,0,9	0/0:29,0:9:2.86:0,3,92	1/1:22,0:21:32.73:233,33,0	0/0:23,0:23:44.90:0,45,277	0/0:12,0:12:12.91:0,13,141	0/0:24,0:24:59.95:0,60,609	0/0:14,0:14:19.95:0,20,135	0/0:21,0:19:39.10:0,39,346	0/0:15,0:14:6.25:0,6,95	0/0:20,0:20:27.74:0,28,174	0/0:14,0:13:12.35:0,12,159	0/0:15,0:14:35.73:0,36,208	1/1:19,1:18:17.87:135,18,0	0/0:15,0:15:32.39:0,32,407	0/1:11,3:11:11.10:93,0,11	1/1:21,2:20:40.74:282,41,0	0/0:18,0:17:47.82:0,48,462	0/0:28,0:28:69.35:0,69,726	0/0:13,0:13:34.63:0,35,388	0/0:9,0:9:6.71:0,7,137	0/0:11,0:11:28.48:0,28,185	0/0:19,0:17:40.24:0,40,233	1/1:10,0:9:17.77:127,18,0	1/1:23,1:24:18.91:371,19,0	0/0:23,0:21:59.78:0,60,633	0/0:15,0:15:38.15:0,38,387
chr10	96585776	.	C	CT	2567.23	PASS	AB=0.853;AC=25;AF=0.446;AN=56;BaseQRankSum=2.975;DP=532;FS=9.786;HRun=11;HaplotypeScore=97.3778;InbreedingCoeff=0.3251;MQ=48.59;MQ0=25;MQRankSum=-6.247;QD=8.42;ReadPosRankSum=-1.445;VQSLOD=1.5493;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,2:38:18.90:0,19,502	1/1:9,0:8:13.45:94,13,0	0/0:21,0:2:2.98:0,3,22	0/1:28,0:8:0.96:1,0,11	0/1:22,0:21:5.26:32,0,5	1/1:6,17:23:27.08:437,27,0	1/1:6,8:13:0.55:169,1,0	0/0:24,0:24:32.80:0,33,254	1/1:4,10:14:30.05:297,30,0	0/1:15,6:20:19.49:165,0,19	0/1:7,7:16:2.94:155,0,3	1/1:7,12:21:26.74:244,27,0	1/1:9,8:16:3.47:167,3,0	1/1:9,6:14:3.80:213,4,0	0/0:20,0:18:0.90:0,1,8	0/0:14,0:14:29.75:0,30,225	0/1:15,0:12:3.26:50,0,3	0/1:23,0:20:15.54:31,0,16	0/0:19,0:18:23.85:0,24,186	0/0:27,0:28:59.49:0,59,438	0/0:12,0:13:28.93:0,29,215	0/1:5,5:10:2.24:151,0,2	0/1:4,7:12:42.37:140,0,42	1/1:3,15:17:35.91:349,36,0	0/0:10,0:9:3.54:0,4,9	0/1:24,0:24:29.60:51,0,30	0/0:22,1:21:20.20:0,20,331	0/0:15,0:16:25.92:0,26,192
chr10	96585890	.	T	TTTCC	7083.29	PASS	AB=0.940;AC=34;AF=0.607;AN=56;BaseQRankSum=-2.626;DP=538;FS=7.781;HRun=0;HaplotypeScore=98.8713;InbreedingCoeff=0.3624;MQ=57.38;MQ0=22;MQRankSum=-0.700;QD=17.75;ReadPosRankSum=-0.394;VQSLOD=3.4628;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:20:17.10:258,0,17	0/1:12,0:12:29.84:134,0,30	0/0:18,0:4:11.75:0,12,81	0/1:19,0:5:3.23:3,0,11	0/1:19,0:19:99:122,0,173	1/1:3,27:31:0.39:314,0,0	1/1:13,1:13:32.88:340,33,0	0/0:18,0:10:29.93:0,30,255	1/1:3,14:18:18.06:401,18,0	1/1:3,28:31:89.74:1409,90,0	1/1:2,13:16:38.74:602,39,0	0/1:1,10:12:11.02:88,0,11	1/1:1,15:16:15.05:368,15,0	1/1:10,2:12:28.96:297,29,0	0/1:20,0:20:69.67:214,0,70	0/1:12,0:11:11.98:115,0,12	1/1:17,0:16:20.55:292,21,0	1/1:6,1:22:12.04:223,12,0	0/0:11,0:16:39.04:0,39,424	0/0:14,0:25:71.91:0,72,708	0/0:7,0:13:26.98:0,27,267	1/1:3,15:19:18.48:397,18,0	1/1:2,16:19:3.88:465,4,0	1/1:2,25:30:29.13:707,29,0	1/1:1,18:19:6.02:155,6,0	0/1:16,0:16:81.83:178,0,82	0/0:15,0:28:59.86:0,60,579	0/0:11,0:18:41.98:0,42,405
chr10	96586365	.	AGTGTGTGTGT	A	2932.59	PASS	AB=0.883;AC=31;AF=0.574;AN=54;BaseQRankSum=2.892;DP=536;FS=1.575;HRun=0;HaplotypeScore=187.8611;InbreedingCoeff=0.4451;MQ=46.76;MQ0=23;MQRankSum=-4.880;QD=9.16;ReadPosRankSum=0.080;VQSLOD=2.6012;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:19.57:0,20,812	0/0:14,0:15:17.29:0,17,623	0/0:17,0:4:3.01:0,3,89	0/0:26,0:10:12.51:0,13,281	0/0:28,0:29:27.09:0,27,1073	1/1:10,9:17:17.92:249,18,0	1/1:14,0:15:3.01:47,3,0	0/1:27,0:25:14.90:15,0,161	1/1:9,5:14:8.99:178,9,0	1/1:11,5:15:18.06:537,18,0	1/1:10,3:12:2.97:20,3,0	1/1:7,5:12:15.01:379,15,0	1/1:5,4:9:21.07:576,21,0	1/1:4,6:9:3.48:90,3,0	0/0:26,0:24:23.76:0,24,930	0/0:25,0:27:29.96:0,30,1152	1/1:24,0:24:12.04:303,12,0	1/1:18,0:17:6.02:140,6,0	0/1:16,0:16:25.06:25,0,43	0/1:13,0:17:59.51:60,0,91	0/1:24,0:21:25.07:25,0,26	./.	1/1:13,2:15:5.77:40,6,0	1/1:25,3:28:8.99:144,9,0	0/0:11,0:11:9.40:0,9,392	0/0:15,0:15:30.10:0,30,1311	1/1:14,1:15:6.02:144,6,0	0/1:13,1:21:32.92:151,0,33
chr10	96586391	.	TGTGTGTGTGTGTGTGG	T	916.59	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=5.152;DP=503;FS=4.962;HRun=0;HaplotypeScore=230.4131;InbreedingCoeff=0.3683;MQ=39.63;MQ0=35;MQRankSum=-6.289;QD=9.75;ReadPosRankSum=1.248;VQSLOD=2.4477;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:26.64:0,27,1431	0/0:13,0:13:14.04:0,14,1154	0/0:7,0:1:3.01:0,3,153	0/0:12,0:4:12.04:0,12,484	0/0:30,0:29:44.91:0,45,2153	0/0:23,0:19:38.71:0,39,636	0/0:14,0:11:10.39:0,10,128	0/0:20,0:17:47.62:0,48,1197	0/0:15,0:14:27.47:0,27,375	0/0:19,0:18:10.68:0,11,788	0/0:8,0:7:6.02:0,6,127	0/1:15,0:14:15.48:15,0,248	0/1:16,0:15:69.30:69,0,251	0/1:13,0:12:12.44:12,0,102	0/0:20,0:17:37.87:0,38,1735	0/0:24,0:24:42.67:0,43,1908	1/1:10,6:16:11.96:672,12,0	1/1:1,16:16:6.02:276,6,0	0/0:19,0:18:18.08:0,18,604	0/0:15,0:11:18.06:0,18,460	0/0:22,0:18:26.38:0,26,573	0/0:16,0:16:15.25:0,15,159	0/0:19,0:17:20.92:0,21,482	0/0:32,0:31:37.84:0,38,505	0/0:11,0:10:15.01:0,15,743	0/0:18,0:17:48.82:0,49,2467	0/1:16,0:16:1.23:1,0,3	0/0:16,0:13:27.87:0,28,585
chr10	96586396	.	GTGTGTGTGT	G	1726.55	PASS	AB=0.952;AC=18;AF=0.321;AN=56;BaseQRankSum=4.738;DP=468;FS=43.935;HRun=0;HaplotypeScore=184.3453;InbreedingCoeff=-0.1515;MQ=38.73;MQ0=30;MQRankSum=-5.907;QD=6.56;ReadPosRankSum=4.126;VQSLOD=1.4910;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:23.03:0,23,751	0/0:13,0:13:26.06:0,26,688	0/0:4,0:1:3.01:0,3,67	0/0:6,0:4:12.04:0,12,224	0/0:28,0:27:36.02:0,36,1138	0/1:21,0:17:29.21:150,0,29	1/1:13,0:9:4.86:47,5,0	0/0:19,0:16:17.64:0,18,536	0/1:10,1:11:9.82:124,0,10	0/1:17,1:17:99:291,0,280	0/1:6,0:5:0.97:15,0,1	0/1:14,1:14:88.79:201,0,89	0/1:14,2:16:99:365,0,110	0/1:11,1:11:20.98:44,0,21	0/0:19,0:17:35.74:0,36,948	0/0:22,0:22:31.41:0,31,960	0/1:19,0:18:99:219,0,215	1/1:16,0:16:6.02:112,6,0	0/0:15,0:14:9.82:0,10,254	0/1:15,1:12:38.17:38,0,56	0/1:16,0:13:7.85:24,0,8	0/0:17,1:18:8.92:0,9,90	0/1:17,3:18:20.08:20,0,115	0/1:29,0:28:23.20:69,0,23	0/0:12,0:11:11.87:0,12,394	0/0:17,0:16:48.16:0,48,1515	0/1:18,0:18:43.09:85,0,43	0/1:15,0:12:83.89:84,0,100
chr10	96586398	.	GTGTGTGTGGAGAGA	G	2158.27	PASS	AB=0.990;AC=21;AF=0.375;AN=56;BaseQRankSum=1.126;DP=465;FS=25.496;HRun=0;HaplotypeScore=207.0107;InbreedingCoeff=0.0859;MQ=38.73;MQ0=31;MQRankSum=-6.636;QD=7.24;ReadPosRankSum=2.309;VQSLOD=1.0728;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:31:22.34:22,0,599	0/0:13,0:13:26.80:0,27,889	0/0:3,0:1:3.01:0,3,66	0/0:5,0:3:9.03:0,9,163	0/0:27,0:26:39.11:0,39,1289	0/1:20,0:16:79.76:80,0,288	0/0:13,0:9:6.49:0,6,165	0/1:17,0:14:65.80:122,0,66	0/0:11,0:11:11.57:0,12,206	0/1:18,0:17:99:248,0,508	0/0:6,0:5:1.87:0,2,6	0/1:15,0:14:99:144,0,414	0/1:18,0:16:99:230,0,645	0/1:13,0:12:46.70:47,0,335	0/0:20,0:18:39.47:0,39,1302	0/1:22,0:22:8.90:9,0,914	0/1:20,0:19:99:185,0,358	1/1:17,0:17:5.91:72,6,0	1/1:15,0:14:21.07:393,21,0	1/1:14,0:11:11.95:191,12,0	0/1:15,0:13:6.13:80,0,6	0/0:18,0:18:15.05:0,15,462	0/0:21,0:19:26.69:0,27,707	0/1:29,0:28:21.15:21,0,785	0/0:12,0:11:12.04:0,12,414	0/0:18,0:17:51.17:0,51,1802	1/1:5,12:17:8.85:228,9,0	1/1:14,0:11:15.02:266,15,0
chr10	96586459	.	C	CAG	17435.60	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-7.123;DP=560;FS=7.543;HRun=0;HaplotypeScore=94.7377;InbreedingCoeff=0.9945;MQ=78.66;MQ0=1;MQRankSum=0.392;QD=48.70;ReadPosRankSum=4.178;VQSLOD=6.0306;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:69.24:1290,69,0	1/1:0,9:9:24.08:448,24,0	0/0:21,0:20:59.20:0,59,793	0/0:31,0:26:54.49:0,54,869	1/1:2,18:20:48.16:899,48,0	1/1:1,17:18:51.17:955,51,0	1/1:3,19:22:57.20:1067,57,0	0/0:26,0:26:72.24:0,72,1047	1/1:0,15:15:39.13:730,39,0	1/1:2,15:17:48.16:895,48,0	1/1:0,17:17:51.17:955,51,0	1/1:2,16:18:45.15:838,45,0	1/1:3,18:21:54.19:1011,54,0	1/1:1,17:18:51.17:955,51,0	1/1:2,22:24:60.20:1124,60,0	1/1:0,22:22:63.22:1178,63,0	0/0:22,0:22:57.11:0,57,774	0/0:14,0:14:21.07:0,21,309	0/0:22,0:21:63.20:0,63,907	0/0:20,0:20:60.20:0,60,880	0/0:19,0:19:57.15:0,57,815	1/1:1,24:25:57.19:1061,57,0	1/1:0,23:23:63.22:1179,63,0	1/1:1,21:22:48.16:898,48,0	1/1:0,16:16:42.14:787,42,0	1/1:0,21:21:63.22:1166,63,0	0/0:22,0:22:42.08:0,42,574	0/0:4,0:4:12.04:0,12,177
chr10	96588444	.	C	CCG	1150.07	PASS	AB=0.883;AC=30;AF=0.600;AN=50;BaseQRankSum=7.348;DP=358;FS=4.122;HRun=0;HaplotypeScore=52.9697;InbreedingCoeff=0.4882;MQ=36.13;MQ0=84;MQRankSum=4.781;QD=5.87;ReadPosRankSum=-0.019;VQSLOD=2.1191;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:10:16.01:84,16,0	1/1:6,0:3:4.23:25,4,0	./.	./.	1/1:14,0:8:6.47:56,6,0	1/1:1,6:6:3.01:39,3,0	1/1:4,9:9:3.01:39,3,0	0/0:31,0:23:60.14:0,60,894	1/1:4,0:4:12.01:152,12,0	1/1:3,8:8:8.69:78,9,0	./.	0/1:5,7:8:17.28:94,0,17	1/1:9,0:3:9.02:124,9,0	1/1:10,0:6:17.99:203,18,0	1/1:12,0:5:8.46:33,8,0	1/1:10,0:5:9.40:37,9,0	0/1:19,0:12:11.10:65,0,11	0/1:17,0:8:3.14:19,0,3	0/0:14,0:9:21.07:0,21,328	0/0:14,0:12:23.74:0,24,362	0/0:17,0:13:33.50:0,33,429	0/0:2,7:8:0.47:0,0,1	0/0:4,9:9:0:0,0,0	0/1:16,2:9:52.46:66,0,52	1/1:8,0:6:8.55:40,9,0	1/1:10,0:7:18.80:167,19,0	0/0:15,0:14:32.89:0,33,440	0/0:31,0:13:21.17:0,21,268
chr10	96589033	.	GA	G	4189.12	PASS	AB=0.892;AC=34;AF=0.607;AN=56;BaseQRankSum=0.750;DP=598;FS=3.979;HRun=13;HaplotypeScore=69.4541;InbreedingCoeff=0.5935;MQ=66.19;MQ0=4;MQRankSum=0.179;QD=10.37;ReadPosRankSum=4.520;VQSLOD=3.3821;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:86.92:0,87,810	1/1:3,4:7:5.90:43,6,0	0/1:31,1:14:20.53:30,0,21	0/1:33,0:15:10.42:10,0,95	1/1:7,31:38:80.39:591,80,0	1/1:1,10:15:2.84:148,3,0	1/1:5,19:24:7.41:331,7,0	0/0:11,0:21:37.58:0,38,241	1/1:5,15:21:31.82:225,32,0	1/1:8,12:19:11.62:238,12,0	1/1:6,11:17:29.55:209,30,0	1/1:5,11:16:2.69:151,3,0	1/1:5,10:17:24.93:165,25,0	1/1:3,11:14:3.61:189,4,0	1/1:3,20:24:52.62:378,53,0	0/0:7,0:13:29.25:0,29,192	0/0:28,2:30:22.23:0,22,516	0/0:30,1:30:23.15:0,23,531	0/0:4,0:18:43.24:0,43,245	0/0:4,0:14:31.91:0,32,195	0/0:6,1:12:1.60:0,2,123	1/1:6,12:18:26.80:197,27,0	1/1:2,11:13:23.82:175,24,0	1/1:7,28:36:78.59:559,79,0	0/1:6,11:17:9.26:95,0,9	1/1:8,23:32:17.38:448,17,0	0/0:5,0:17:22.78:0,23,143	0/1:3,0:9:7.37:7,0,48
chr10	96589570	.	A	AG	491.15	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.211;DP=400;FS=10.988;HRun=1;HaplotypeScore=65.7499;InbreedingCoeff=0.6499;MQ=69.62;MQ0=0;MQRankSum=-0.439;QD=14.03;ReadPosRankSum=1.963;VQSLOD=1.8258;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:46.21:0,46,261	0/0:6,0:6:16.49:0,16,144	0/0:23,0:11:15.55:0,16,161	0/0:21,0:12:14.35:0,14,111	0/0:13,0:13:20.74:0,21,172	0/0:13,0:13:12.44:0,12,119	0/0:10,0:10:15.79:0,16,129	0/0:20,0:21:38.80:0,39,325	0/0:13,0:13:4.72:0,5,31	0/0:15,0:14:26.24:0,26,244	0/0:21,0:21:31.29:0,31,201	0/0:8,0:8:7.56:0,8,57	0/0:9,0:9:8.99:0,9,76	0/0:7,0:7:12.77:0,13,67	0/0:19,0:19:51:0,51,468	0/0:8,0:8:10.27:0,10,105	1/1:13,10:22:49.96:555,50,0	1/1:2,10:12:3.01:44,3,0	0/0:21,0:22:60.08:0,60,579	0/0:14,0:15:38.88:0,39,336	0/0:14,0:15:35.89:0,36,301	0/0:7,0:7:5.94:0,6,43	0/0:22,0:22:17.42:0,17,112	0/0:7,0:7:14.39:0,14,101	0/0:4,0:4:10.05:0,10,78	0/0:13,0:13:32.80:0,33,297	0/0:16,0:16:32.96:0,33,313	0/0:5,0:5:12.01:0,12,115
chr10	96589902	.	C	CCAA	4691.24	PASS	AB=0.562;AC=25;AF=0.446;AN=56;BaseQRankSum=2.974;DP=616;FS=10.117;HRun=0;HaplotypeScore=135.1506;InbreedingCoeff=0.1667;MQ=72.53;MQ0=1;MQRankSum=-7.567;QD=12.12;ReadPosRankSum=3.245;VQSLOD=4.1179;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:28:19.97:339,20,0	1/1:1,0:9:0.21:240,0,0	0/0:25,0:22:56.38:0,56,731	0/0:18,0:19:40.44:0,40,625	0/1:6,0:17:30.89:275,0,31	0/1:4,0:21:58.08:187,0,58	0/1:5,0:26:48.57:117,0,49	0/0:5,0:25:38.34:0,38,336	0/1:4,0:24:11.01:187,0,11	0/1:5,0:30:25.63:367,0,26	1/1:3,0:23:11.46:269,11,0	1/1:2,0:23:8.93:205,9,0	1/1:1,0:9:3.82:59,4,0	0/1:4,0:18:30.97:151,0,31	1/1:2,1:26:16.50:687,16,0	0/1:9,0:19:99:159,0,118	0/0:3,0:22:61.97:0,62,677	0/0:0,0:16:42.12:0,42,483	0/0:1,0:15:21.63:0,22,196	0/0:2,0:20:56.68:0,57,334	0/0:5,0:35:83.54:0,84,540	1/1:0,0:14:33.78:206,34,0	0/1:3,0:19:47.38:125,0,47	0/1:4,0:35:51.48:205,0,51	0/1:3,0:18:1.10:350,0,1	0/1:5,0:24:30.04:564,0,30	0/0:6,0:30:49.40:0,49,411	0/0:0,0:20:26.48:0,26,163
chr10	96590021	.	AACACAC	A	9386.49	PASS	AB=0.715;AC=41;AF=0.732;AN=56;BaseQRankSum=5.360;DP=654;FS=0.741;HRun=0;HaplotypeScore=163.3160;InbreedingCoeff=0.4005;MQ=66.58;MQ0=11;MQRankSum=-4.931;QD=17.91;ReadPosRankSum=4.245;VQSLOD=3.9806;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,6:26:15.05:313,15,0	1/1:4,5:10:15.05:292,15,0	0/0:38,0:14:6.02:0,6,105	0/0:41,0:19:2.42:0,2,151	1/1:15,16:32:30.06:567,30,0	1/1:5,16:21:33.11:688,33,0	0/1:18,10:29:25.64:274,0,26	0/1:24,1:34:76.07:76,0,225	1/1:8,14:23:40.02:794,40,0	1/1:9,11:20:39.13:798,39,0	1/1:8,10:20:16.62:287,17,0	1/1:10,14:24:30.10:626,30,0	1/1:6,2:8:3.01:63,3,0	1/1:10,11:21:23.82:500,24,0	1/1:7,14:21:36.12:751,36,0	1/1:8,10:20:30.10:584,30,0	0/0:20,0:18:3.01:0,3,86	0/0:15,0:13:21.03:0,21,424	0/1:8,0:15:36.59:37,0,49	0/1:12,0:17:45.44:95,0,45	0/1:30,0:66:2.77:3,0,139	1/1:11,9:20:27.09:526,27,0	1/1:7,6:18:26.42:439,26,0	1/1:9,7:17:12.04:250,12,0	1/1:3,12:15:24.08:500,24,0	1/1:15,17:32:45.15:916,45,0	0/0:11,0:15:3.47:0,3,39	1/1:6,0:11:3.54:7,4,0
chr10	96590494	.	AGG	A	5603.25	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-0.713;DP=514;FS=2.235;HRun=9;HaplotypeScore=74.2849;InbreedingCoeff=0.9869;MQ=67.95;MQ0=1;MQRankSum=0.727;QD=27.74;ReadPosRankSum=5.100;VQSLOD=4.9216;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:25:39.94:0,40,214	0/0:2,0:9:14.97:0,15,53	0/0:7,0:7:12.03:0,12,170	0/0:6,0:6:12.04:0,12,184	0/0:3,0:24:48.62:0,49,184	1/1:1,15:16:45.13:523,45,0	1/1:3,17:20:42.12:489,42,0	0/0:12,0:12:24.08:0,24,376	1/1:2,17:19:42.11:489,42,0	1/1:1,16:17:45.07:507,45,0	1/1:2,9:11:27.04:300,27,0	1/1:1,21:21:60.18:699,60,0	1/1:4,17:21:51.14:594,51,0	1/1:0,18:18:42.12:489,42,0	0/0:5,0:21:42.42:0,42,150	0/0:1,0:20:47.90:0,48,181	0/0:33,0:33:87.30:0,87,1405	0/0:21,0:20:60.20:0,60,974	0/0:17,0:17:33.11:0,33,539	0/0:11,0:12:18.05:0,18,248	0/0:19,0:19:51.13:0,51,755	1/1:2,18:20:42.07:474,42,0	1/1:1,11:13:23.80:341,24,0	1/1:5,20:25:60.16:697,60,0	0/0:5,0:23:34.48:0,34,121	0/0:4,0:22:48.90:0,49,213	0/0:21,0:21:58.07:0,58,903	0/0:20,0:20:49.05:0,49,784
chr10	96592111	.	T	TC	2655.11	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-9.662;DP=626;FS=5.711;HRun=6;HaplotypeScore=66.4780;InbreedingCoeff=0.9997;MQ=89.11;MQ0=0;MQRankSum=-1.680;QD=29.83;ReadPosRankSum=-0.998;VQSLOD=3.9567;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.21:0,93,948	1/1:2,9:11:27.09:340,27,0	0/0:27,0:27:60.11:0,60,609	0/0:22,0:22:48.07:0,48,476	1/1:3,20:23:60.17:739,60,0	0/0:21,0:21:54.12:0,54,551	0/0:19,0:19:54.06:0,54,533	0/0:30,0:30:66.14:0,66,669	0/0:23,0:23:63.12:0,63,636	0/0:28,0:28:66.13:0,66,667	0/0:13,0:13:33.07:0,33,335	0/0:23,0:23:66.15:0,66,672	0/0:19,0:19:54.12:0,54,551	0/0:21,0:21:57.11:0,57,574	1/1:3,18:21:51.16:642,51,0	0/0:19,0:19:51.11:0,51,520	0/0:19,0:19:51.11:0,51,520	0/0:21,0:21:48.08:0,48,481	0/0:13,0:13:36.05:0,36,354	0/0:20,0:20:57.13:0,57,581	0/0:34,0:34:93.21:0,93,949	0/0:31,0:31:69.07:0,69,728	0/0:24,0:24:65.88:0,66,654	0/0:25,0:25:69.13:0,69,695	1/1:4,13:17:42.09:506,42,0	1/1:1,16:17:48.15:604,48,0	0/0:29,0:29:78.16:0,78,789	0/0:23,0:23:69.16:0,69,704
chr10	96593360	.	TTC	T	9708.92	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.420;DP=710;FS=2.893;HRun=0;HaplotypeScore=88.9085;InbreedingCoeff=0.9900;MQ=86.75;MQ0=3;MQRankSum=-7.266;QD=37.06;ReadPosRankSum=1.355;VQSLOD=6.9864;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,181,3250	0/0:13,0:13:39.13:0,39,710	0/0:23,0:23:49.84:0,50,938	0/0:26,0:25:66.17:0,66,1032	0/0:24,0:24:63.22:0,63,1145	1/1:3,20:23:57.19:817,57,0	1/1:2,33:35:93.31:1333,93,0	0/0:29,0:29:81.26:0,81,1431	1/1:0,29:28:78.26:1118,78,0	1/1:0,29:29:87.24:1182,87,0	1/1:0,15:15:38.89:513,39,0	1/1:0,20:20:57.19:817,57,0	1/1:1,27:27:69.23:989,69,0	1/1:0,21:21:51.17:730,51,0	0/0:26,0:26:78.25:0,78,1379	0/0:16,1:17:8.18:0,8,827	0/0:23,0:23:69.23:0,69,1213	0/0:24,0:24:72.24:0,72,1285	0/0:23,0:23:66.18:0,66,1148	0/0:14,0:14:42.14:0,42,754	0/0:50,0:50:99:0,144,2604	1/1:1,13:13:33.07:450,33,0	1/1:0,15:15:42.14:602,42,0	1/1:0,33:33:81.27:1161,81,0	0/0:21,0:21:57.18:0,57,1005	0/0:34,1:35:56.34:0,56,1670	0/0:27,0:27:78.27:0,78,1417	0/0:10,0:10:30.10:0,30,550
chr10	96594323	.	T	TA	584.94	PASS	AB=0.835;AC=10;AF=0.179;AN=56;BaseQRankSum=5.358;DP=416;FS=0.000;HRun=1;HaplotypeScore=59.7554;InbreedingCoeff=0.4040;MQ=66.98;MQ0=0;MQRankSum=-0.493;QD=8.36;ReadPosRankSum=-2.072;VQSLOD=0.1416;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:7.82:0,8,231	1/1:3,5:8:0.62:108,1,0	0/0:5,0:5:14.99:0,15,165	0/0:4,0:4:8.89:0,9,94	0/1:4,9:13:0.90:168,0,1	0/0:17,0:17:16.37:0,16,134	0/0:7,0:7:19.01:0,19,84	0/0:35,0:35:99:0,102,1313	0/0:13,0:13:32.88:0,33,136	0/0:26,0:26:34.93:0,35,177	0/0:18,0:18:20.84:0,21,155	0/0:9,0:9:24.02:0,24,99	0/0:12,0:12:32.39:0,32,138	0/0:9,0:9:1.05:0,1,75	1/1:3,4:7:6.83:102,7,0	0/0:19,0:19:23.98:0,24,162	0/0:25,0:25:69.23:0,69,957	0/0:17,0:17:51.14:0,51,672	0/0:19,0:19:54.15:0,54,706	0/0:18,0:18:54.17:0,54,739	0/0:6,0:6:18.06:0,18,252	0/0:11,0:11:4.94:0,5,87	0/1:13,0:13:6.94:7,0,95	0/1:7,0:7:20.45:20,0,38	1/1:2,5:7:9.61:138,10,0	0/1:10,5:15:15.89:182,0,16	0/0:33,0:33:99:0,99,1375	0/0:15,0:15:45.15:0,45,625
chr10	96594324	.	T	TA	472.33	PASS	AB=0.750;AC=9;AF=0.161;AN=56;BaseQRankSum=8.073;DP=408;FS=1.428;HRun=0;HaplotypeScore=59.7508;InbreedingCoeff=0.5705;MQ=67.11;MQ0=0;MQRankSum=-0.251;QD=9.84;ReadPosRankSum=0.135;VQSLOD=3.6450;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.07:0,72,372	1/1:3,5:8:3.62:91,4,0	0/0:5,0:5:14.62:0,15,159	0/0:4,0:4:11.88:0,12,119	1/1:4,9:13:6.75:166,7,0	0/0:18,0:18:0.78:0,1,164	0/0:7,0:7:20.02:0,20,105	0/0:33,0:33:96.30:0,96,1286	0/0:14,0:14:36.94:0,37,183	0/0:26,0:26:67.80:0,68,277	0/0:18,0:18:51.19:0,51,254	0/0:9,0:9:0.85:0,1,87	0/0:12,0:12:34.22:0,34,174	0/0:9,0:9:25.86:0,26,136	1/1:2,3:6:2.08:76,2,0	0/0:19,0:19:53.23:0,53,256	0/0:25,0:25:72.20:0,72,984	0/0:17,0:17:51.14:0,51,674	0/0:18,0:18:54.16:0,54,710	0/0:17,0:17:51.17:0,51,713	0/0:7,0:7:18.06:0,18,252	0/0:10,0:10:28.48:0,28,142	0/0:12,0:12:34.43:0,34,180	0/0:5,0:5:14.31:0,14,73	1/1:1,5:6:3.82:109,4,0	0/1:10,5:15:30.19:159,0,30	0/0:33,0:33:99:0,99,1383	0/0:15,0:15:45.15:0,45,628
chr10	96594446	.	A	AGACT	2436.02	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.535;DP=520;FS=1.542;HRun=0;HaplotypeScore=100.4924;InbreedingCoeff=0.9908;MQ=81.66;MQ0=1;MQRankSum=-5.078;QD=67.67;ReadPosRankSum=4.193;VQSLOD=5.8267;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.30:0,96,1704	0/0:5,0:5:15.05:0,15,280	0/0:23,0:23:60.21:0,60,1097	0/0:19,0:19:45.15:0,45,771	0/0:16,0:16:45.14:0,45,808	0/0:19,0:19:57.20:0,57,1064	0/0:13,0:13:39.13:0,39,728	0/0:35,0:35:96.27:0,96,1697	0/0:15,0:15:45.15:0,45,840	0/0:24,0:24:69.24:0,69,1286	0/0:22,0:22:63.22:0,63,1168	0/0:16,0:16:42.14:0,42,775	0/0:24,0:24:69.24:0,69,1288	0/0:17,0:17:48.16:0,48,889	0/0:13,0:13:39.13:0,39,717	0/0:10,0:10:27.09:0,27,493	1/1:1,24:24:66.23:1759,66,0	1/1:0,11:11:30.10:799,30,0	0/0:15,0:15:42.13:0,42,746	0/0:22,0:22:63.22:0,63,1165	0/0:25,0:25:66.21:0,66,1200	0/0:15,0:15:45.14:0,45,810	0/0:11,0:11:33.11:0,33,616	0/0:17,0:17:48.16:0,48,885	0/0:22,0:22:63.22:0,63,1175	0/0:15,0:15:45.15:0,45,839	0/0:14,0:14:42.14:0,42,773	0/0:23,0:23:57.20:0,57,1064
chr10	96594516	.	C	CTTGTTTGA	3554.21	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.192;DP=527;FS=7.146;HRun=0;HaplotypeScore=170.2584;InbreedingCoeff=0.9890;MQ=82.40;MQ0=1;MQRankSum=-9.155;QD=96.06;ReadPosRankSum=-0.253;VQSLOD=3.6731;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,123,3323	0/0:6,0:6:15.05:0,15,375	0/0:19,0:18:38.71:0,39,922	0/0:24,0:23:54.15:0,54,1258	0/0:14,0:14:42.14:0,42,1123	0/0:19,0:19:54.19:0,54,1482	0/0:19,0:19:57.20:0,57,1498	0/0:19,0:19:54.19:0,54,1482	0/0:17,0:17:42.14:0,42,1164	0/0:15,0:15:42.14:0,42,1120	0/0:21,0:21:54.18:0,54,1475	0/0:15,0:15:36.12:0,36,990	0/0:13,0:13:33.11:0,33,913	0/0:14,0:14:36.12:0,36,981	0/0:22,0:22:57.30:0,57,1626	0/0:19,0:19:42.14:0,42,1164	1/1:8,13:22:48.16:1957,48,0	1/1:6,8:14:39.13:1597,39,0	0/0:11,0:11:33.11:0,33,896	0/0:15,0:15:39.12:0,39,1020	0/0:43,0:43:99:0,120,3265	0/0:9,0:9:21.07:0,21,580	0/0:10,0:10:30.06:0,30,768	0/0:28,0:28:78.27:0,78,2091	0/0:17,0:17:48.16:0,48,1309	0/0:17,0:17:42.14:0,42,1108	0/0:17,0:17:45.15:0,45,1207	0/0:19,0:19:48.15:0,48,1223
chr10	96595873	.	A	ATG	1846.47	PASS	AB=0.851;AC=11;AF=0.204;AN=54;BaseQRankSum=-4.853;DP=823;FS=0.545;HRun=0;HaplotypeScore=118.1004;InbreedingCoeff=0.1012;MQ=52.14;MQ0=28;MQRankSum=2.033;QD=6.92;ReadPosRankSum=-1.003;VQSLOD=3.1685;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:43,1:51:38.02:38,0,723	0/0:14,0:15:38.92:0,39,410	./.	0/0:78,0:21:2.74:0,3,12	0/0:16,0:19:13.79:0,14,310	0/0:18,0:22:38.49:0,38,369	0/0:26,0:27:18.09:0,18,419	0/1:19,7:27:35.62:260,0,36	0/0:29,0:30:56.84:0,57,616	0/0:24,0:27:35.03:0,35,355	0/0:16,0:17:20.48:0,20,196	0/0:24,0:26:50.58:0,51,528	0/1:17,1:21:7.44:7,0,310	0/0:23,0:24:10.70:0,11,506	0/0:21,1:25:7.57:0,8,461	0/0:19,0:21:47.78:0,48,494	0/0:11,0:17:7.72:0,8,34	0/0:15,0:23:11.50:0,11,63	0/1:16,3:18:50.59:108,0,51	0/1:12,7:20:46.34:77,0,46	0/1:37,25:69:64.16:809,0,64	0/0:16,0:16:35.92:0,36,378	0/1:19,1:23:4.48:4,0,328	0/0:38,0:43:71.34:0,71,724	0/0:19,0:20:38.89:0,39,386	0/0:23,0:24:32.43:0,32,333	1/1:5,12:17:0.66:337,1,0	1/1:7,10:17:24.07:349,24,0
chr10	96596218	.	A	AGT	2407.95	PASS	AB=0.849;AC=29;AF=0.580;AN=50;BaseQRankSum=-5.878;DP=658;FS=35.798;HRun=0;HaplotypeScore=112.3339;InbreedingCoeff=-0.0654;MQ=69.77;MQ0=21;MQRankSum=2.184;QD=5.40;ReadPosRankSum=-2.376;VQSLOD=0.6552;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:40:25.47:0,25,135	0/0:2,0:9:11.36:0,11,56	./.	./.	./.	0/1:14,8:23:35.42:201,0,35	0/1:25,16:44:99:194,0,133	1/1:24,0:24:9.47:111,9,0	0/1:15,5:22:88.25:155,0,88	0/1:12,0:12:13:97,0,13	0/1:18,0:18:16.02:83,0,16	0/1:18,6:24:40.08:197,0,40	1/1:6,3:8:3.01:45,3,0	1/1:18,8:27:0.64:165,1,0	0/0:5,0:13:5.68:0,6,28	0/0:6,0:18:17.04:0,17,84	1/1:18,0:16:5.97:46,6,0	1/1:16,0:16:8.04:65,8,0	1/1:15,4:19:12.04:179,12,0	0/1:13,3:16:35.72:36,0,56	0/1:53,20:77:99:231,0,101	0/1:16,0:16:20.76:89,0,21	1/1:9,0:9:3.01:31,3,0	0/1:21,11:33:87:464,0,87	0/0:8,0:20:14.91:0,15,90	0/1:12,0:14:14.70:15,0,15	1/1:5,6:12:9.49:117,9,0	1/1:5,2:7:4.26:48,4,0
chr10	96596258	.	T	TGTGTGTGC	311.34	PASS	AB=0.762;AC=4;AF=0.071;AN=56;BaseQRankSum=2.747;DP=608;FS=5.032;HRun=0;HaplotypeScore=163.4433;InbreedingCoeff=-0.0231;MQ=56.41;MQ0=13;MQRankSum=-2.575;QD=4.79;ReadPosRankSum=-1.519;VQSLOD=2.0522;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:81.09:0,81,1040	0/0:13,0:13:18.03:0,18,316	0/0:26,0:14:15.95:0,16,215	0/0:24,0:14:38.63:0,39,386	0/0:20,0:20:20.84:0,21,161	0/0:24,0:24:53.93:0,54,538	0/0:44,0:44:83.74:0,84,988	0/0:16,0:16:14.73:0,15,295	0/0:19,0:19:35.63:0,36,524	0/0:16,0:16:42.45:0,42,383	0/0:12,0:12:20.63:0,21,191	0/0:27,0:25:59.97:0,60,604	0/0:10,0:9:17.97:0,18,148	0/0:25,0:24:53.94:0,54,497	0/0:19,0:18:26.77:0,27,304	0/0:18,0:18:27.48:0,27,460	0/1:0,21:27:18.33:128,0,18	0/1:3,1:17:7.72:264,0,8	0/0:19,0:19:48.41:0,48,400	0/0:15,0:15:35.90:0,36,417	0/0:66,0:65:99:0,106,1061	0/1:13,0:13:13.95:14,0,103	0/1:7,0:7:8.61:9,0,92	0/0:32,0:32:78.89:0,79,941	0/0:24,0:23:35.93:0,36,585	0/0:12,0:12:0.06:0,0,216	0/0:16,0:16:20.31:0,20,236	0/0:5,0:5:5.10:0,5,70
chr10	96597378	.	CG	C	1365.96	PASS	AB=0.879;AC=15;AF=0.268;AN=56;BaseQRankSum=4.953;DP=462;FS=10.438;HRun=10;HaplotypeScore=57.3741;InbreedingCoeff=0.5034;MQ=77.08;MQ0=0;MQRankSum=-1.610;QD=8.87;ReadPosRankSum=3.143;VQSLOD=1.1255;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:24:3.31:0,3,15	0/0:8,0:8:17.78:0,18,127	0/1:16,0:16:21.98:22,0,165	0/0:8,1:9:15.91:0,16,147	0/1:10,0:10:0:0,0,0	0/0:12,1:13:0.98:0,1,219	0/0:20,0:20:42.04:0,42,423	1/1:11,9:20:23.93:208,24,0	0/0:11,0:11:27:0,27,268	0/0:16,0:16:39.08:0,39,408	0/0:9,0:9:18.03:0,18,184	0/1:8,2:10:13.82:14,0,87	0/0:12,0:12:26.98:0,27,246	0/1:13,0:14:1.41:1,0,192	0/0:10,0:18:14.63:0,15,87	0/0:7,0:11:6.22:0,6,30	0/0:33,2:37:22.68:0,23,616	0/0:35,1:36:55.64:0,56,793	1/1:8,13:22:41.47:345,41,0	1/1:2,5:7:5.98:52,6,0	1/1:3,28:31:68.98:599,69,0	0/0:16,0:16:26.99:0,27,261	0/0:6,0:6:6:0,6,58	0/0:35,1:36:67.11:0,67,916	0/0:3,0:9:2.84:0,3,14	0/0:11,0:17:13.75:0,14,84	1/1:5,10:15:23.98:205,24,0	0/1:2,7:9:18.18:89,0,18
chr10	96597959	.	A	AACCTCTCG	1611.78	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.801;DP=485;FS=2.066;HRun=0;HaplotypeScore=122.4452;InbreedingCoeff=0.9869;MQ=90.15;MQ0=0;MQRankSum=-4.808;QD=76.75;ReadPosRankSum=-0.410;VQSLOD=3.7677;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.20:0,57,1658	0/0:7,0:7:21.07:0,21,572	0/0:17,0:17:38.55:0,39,986	0/0:31,0:30:59.11:0,59,1542	0/0:21,0:21:60.12:0,60,1621	0/0:11,0:11:33.11:0,33,967	0/0:15,0:15:45.14:0,45,1225	0/0:33,0:33:87.26:0,87,2237	0/0:15,0:15:36.07:0,36,885	0/0:34,0:34:93.31:0,93,2665	0/0:20,0:20:51.18:0,51,1438	0/0:17,0:17:51.18:0,51,1458	0/0:11,0:11:27.09:0,27,772	0/0:11,0:11:33.11:0,33,937	0/0:12,0:12:24.08:0,24,703	0/0:17,0:17:45.15:0,45,1281	1/1:3,7:13:27.09:1113,27,0	1/1:1,5:8:15.05:617,15,0	0/0:16,0:16:48.13:0,48,1339	0/0:17,0:17:42.12:0,42,1076	0/0:11,0:11:33.11:0,33,937	0/0:13,0:13:36.11:0,36,920	0/0:15,0:15:42.14:0,42,1195	0/0:19,0:19:57.18:0,57,1596	0/0:13,0:13:36.08:0,36,986	0/0:24,0:24:72.25:0,72,2074	0/0:30,0:29:90.26:0,90,2413	0/0:13,0:13:39.13:0,39,1132
chr10	96598070	.	ATTT	A	3528.47	PASS	AB=0.649;AC=36;AF=0.643;AN=56;BaseQRankSum=-3.612;DP=496;FS=0.488;HRun=17;HaplotypeScore=79.9215;InbreedingCoeff=0.8071;MQ=64.44;MQ0=23;MQRankSum=-0.846;QD=14.06;ReadPosRankSum=5.454;VQSLOD=1.3873;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:21:14.33:168,0,14	1/1:1,3:4:8.96:92,9,0	0/0:51,0:14:5.96:0,6,117	0/0:56,0:23:15.90:0,16,139	1/1:4,11:14:17.84:159,18,0	1/1:5,11:16:23.85:233,24,0	1/1:2,10:12:24.02:246,24,0	0/0:28,0:41:69.49:0,69,924	1/1:5,7:13:16.52:182,17,0	1/1:7,10:17:32.65:308,33,0	1/1:5,13:17:35.75:356,36,0	1/1:5,6:11:17.89:177,18,0	1/1:5,5:7:14.93:154,15,0	1/1:3,2:5:8.78:78,9,0	1/1:4,5:10:10.60:119,11,0	1/1:5,1:16:26.28:170,26,0	0/0:11,0:18:32.50:0,33,319	0/1:6,1:11:5.67:6,0,180	0/0:11,0:14:21.06:0,21,293	0/0:12,0:13:27.09:0,27,403	0/0:4,0:8:18.06:0,18,259	1/1:5,6:10:14.87:154,15,0	1/1:3,5:10:14.50:140,15,0	1/1:1,10:12:32.90:325,33,0	1/1:5,11:16:29.89:295,30,0	1/1:9,4:14:16.31:165,16,0	0/0:9,0:14:28.30:0,28,398	0/0:14,0:20:31.32:0,31,405
chr10	96598282	.	C	CT	412.37	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.887;DP=303;FS=0.000;HRun=1;HaplotypeScore=173.3163;InbreedingCoeff=0.7152;MQ=33.92;MQ0=1;MQRankSum=-1.286;QD=24.26;ReadPosRankSum=-0.711;VQSLOD=3.1608;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:30.10:0,30,380	0/0:5,0:5:12.04:0,12,155	0/0:4,0:2:5.98:0,6,59	0/0:7,0:4:12.04:0,12,155	0/0:10,0:10:24.08:0,24,306	0/0:10,0:10:15.05:0,15,194	0/0:20,0:20:39.11:0,39,487	0/0:18,0:18:51.03:0,51,590	0/0:13,0:12:36.12:0,36,462	0/0:17,0:17:48.16:0,48,621	0/0:9,0:9:24.08:0,24,308	0/0:19,0:19:45.15:0,45,578	0/0:5,0:5:15.03:0,15,179	0/0:11,0:10:18.05:0,18,219	0/0:11,0:11:21.07:0,21,268	0/0:11,0:11:30.10:0,30,388	1/1:2,9:10:21.07:314,21,0	1/1:0,6:6:15.05:215,15,0	0/0:19,0:19:33.03:0,33,409	0/0:5,0:5:12.04:0,12,155	0/0:7,0:7:9.03:0,9,116	0/0:2,0:2:6.02:0,6,78	0/0:2,0:2:6.02:0,6,78	0/0:5,0:5:3.01:0,3,39	0/0:15,0:15:42.14:0,42,543	0/0:15,0:15:36.12:0,36,467	0/0:23,0:22:60.19:0,60,776	0/0:7,0:7:21.07:0,21,272
chr10	96598476	.	T	TA	845.14	PASS	AB=0.931;AC=6;AF=0.107;AN=56;BaseQRankSum=-0.577;DP=397;FS=7.281;HRun=8;HaplotypeScore=75.8647;InbreedingCoeff=0.4676;MQ=76.82;MQ0=3;MQRankSum=0.856;QD=10.06;ReadPosRankSum=1.463;VQSLOD=1.9371;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:71.93:0,72,635	0/0:1,0:1:3:0,3,27	0/1:36,1:13:2.95:3,0,61	0/0:46,0:25:6.96:0,7,59	0/0:14,0:14:36.02:0,36,329	0/0:13,0:13:35.89:0,36,316	0/0:11,0:11:20.96:0,21,184	0/0:37,0:37:98.96:0,99,879	0/1:7,1:8:8.83:9,0,168	0/0:17,0:17:38.99:0,39,349	0/0:14,0:14:38.74:0,39,334	0/0:10,0:10:26.97:0,27,235	0/0:2,0:2:5.97:0,6,47	0/0:2,0:2:5.98:0,6,49	0/0:6,0:6:8.97:0,9,73	0/0:8,0:8:20.94:0,21,174	1/1:0,22:22:51.15:584,51,0	1/1:3,14:17:33.10:376,33,0	0/0:21,0:21:53.89:0,54,475	0/0:11,0:11:30.01:0,30,275	0/0:4,0:4:6:0,6,55	0/0:2,0:2:5.99:0,6,50	0/0:3,0:3:9:0,9,82	0/0:1,0:1:3:0,3,27	0/0:13,0:13:32.98:0,33,287	0/0:20,0:20:50.91:0,51,445	0/0:20,0:20:50.95:0,51,449	0/0:9,0:9:27.01:0,27,247
chr10	96599575	.	C	CGT	996.22	PASS	AB=0.976;AC=30;AF=0.682;AN=44;BaseQRankSum=-1.479;DP=457;FS=18.379;HRun=0;HaplotypeScore=76.7686;InbreedingCoeff=0.1370;MQ=58.65;MQ0=11;MQRankSum=-1.928;QD=3.38;ReadPosRankSum=-1.690;VQSLOD=0.4999;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:0:0,0,0	0/0:5,0:5:3:0,3,32	./.	./.	1/1:11,4:15:3.01:44,3,0	1/1:14,0:14:3:28,3,0	1/1:17,0:21:12.03:149,12,0	./.	1/1:12,0:20:11.91:102,12,0	1/1:17,0:17:19.13:156,19,0	1/1:5,3:8:6.02:88,6,0	0/1:15,0:15:15.65:84,0,16	1/1:14,0:16:6.46:50,6,0	1/1:4,1:11:6:52,6,0	0/0:16,2:18:3:0,3,32	1/1:9,1:11:6.48:71,6,0	0/1:16,0:25:21.69:22,0,32	0/1:22,0:29:17.43:17,0,98	0/0:9,0:9:2.84:0,3,14	0/1:12,0:16:7.97:8,0,8	./.	1/1:14,0:14:6.79:45,7,0	1/1:9,0:11:6.01:57,6,0	./.	0/1:10,1:12:26.13:38,0,26	1/1:15,0:13:14.56:116,15,0	0/0:10,0:14:2.13:0,2,40	./.
chr10	96599621	.	TGC	T	424.09	PASS	AB=0.980;AC=13;AF=0.232;AN=56;BaseQRankSum=2.806;DP=427;FS=0.599;HRun=0;HaplotypeScore=73.2457;InbreedingCoeff=-0.0322;MQ=66.97;MQ0=10;MQRankSum=-1.388;QD=2.02;ReadPosRankSum=-1.838;VQSLOD=1.1546;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:21.04:254,21,0	0/0:5,0:5:11.94:0,12,123	0/0:24,0:18:44.18:0,44,447	0/1:24,0:14:43.32:43,0,225	0/0:14,0:14:8.94:0,9,72	0/0:11,0:11:11.87:0,12,101	0/1:22,3:23:81.17:81,0,280	0/0:18,0:16:34.34:0,34,222	0/0:10,0:10:18.96:0,19,183	0/1:21,0:21:48.58:49,0,256	0/1:10,0:10:14.62:15,0,43	0/1:19,0:19:8.07:8,0,244	0/1:11,1:11:8.98:9,0,84	0/0:11,0:11:8.93:0,9,75	0/0:15,0:14:17.59:0,18,146	1/1:8,0:8:0.57:43,1,0	0/1:25,0:24:35.72:36,0,173	0/1:34,0:34:27.65:28,0,326	0/0:10,0:8:8.84:0,9,67	0/0:10,0:10:5.09:0,5,89	0/0:12,0:11:12.49:0,12,124	0/1:10,0:10:8.33:8,0,51	0/0:12,0:11:9.91:0,10,82	0/0:25,0:25:12.85:0,13,98	0/0:9,0:9:17.91:0,18,172	0/0:16,1:15:2.56:0,3,307	0/0:13,0:13:14.23:0,14,123	0/0:1,0:1:2.97:0,3,20
chr10	96599935	.	G	GAACTGGCTGAGACCCACGTAACGAT	30769.41	PASS	AB=0.756;AC=54;AF=0.964;AN=56;BaseQRankSum=-1.146;DP=238;FS=32.849;HRun=0;HaplotypeScore=279.0536;InbreedingCoeff=-0.0625;MQ=76.87;MQ0=1;MQRankSum=-3.404;QD=129.28;ReadPosRankSum=1.764;VQSLOD=2.7902;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:24.04:1658,24,0	1/1:4,0:4:6.02:436,6,0	0/1:9,0:11:99:894,0,100	0/1:4,1:7:17.09:1107,0,17	1/1:12,0:12:27.85:1353,28,0	1/1:12,0:12:29.81:1099,30,0	1/1:6,0:6:13.29:669,13,0	1/1:18,0:18:51.18:3768,51,0	1/1:11,0:11:27.01:1563,27,0	1/1:13,0:13:35.32:2064,35,0	1/1:6,0:6:15.04:686,15,0	1/1:13,0:13:30.02:2240,30,0	1/1:8,0:8:14.79:839,15,0	1/1:8,0:8:18.06:1510,18,0	1/1:11,0:11:14.97:769,15,0	1/1:8,0:8:18.06:925,18,0	1/1:10,0:10:20.99:941,21,0	1/1:4,0:4:9.03:502,9,0	1/1:6,0:6:15.05:724,15,0	1/1:9,0:9:20.99:1117,21,0	1/1:4,0:4:9:381,9,0	1/1:4,0:4:8.92:108,9,0	1/1:3,0:3:6.02:335,6,0	1/1:4,0:4:5.93:40,6,0	1/1:5,0:5:15.04:683,15,0	1/1:17,0:17:48.14:2717,48,0	1/1:9,0:9:20.94:1379,21,0	1/1:4,0:4:9.03:262,9,0
chr10	96600655	.	AC	A	1316.64	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.321;DP=659;FS=3.425;HRun=7;HaplotypeScore=67.9439;InbreedingCoeff=0.9991;MQ=95.71;MQ0=0;MQRankSum=-1.729;QD=23.10;ReadPosRankSum=1.449;VQSLOD=4.0837;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,112,1380	0/0:10,0:10:30.10:0,30,377	0/0:33,0:33:77:0,77,901	0/0:28,0:28:49.32:0,49,673	0/0:18,0:18:48.14:0,48,584	0/0:25,0:25:72.23:0,72,904	0/0:23,0:23:66.19:0,66,816	0/0:31,0:31:60.19:0,60,746	0/0:25,0:25:66.20:0,66,818	0/0:27,0:27:81.24:0,81,1005	0/0:20,0:20:51.12:0,51,594	0/0:21,0:21:54.15:0,54,655	0/0:12,0:12:36.12:0,36,453	0/0:21,0:21:57.17:0,57,704	0/0:19,0:19:51.15:0,51,629	0/0:16,0:16:45.13:0,45,553	1/1:3,36:39:93.21:949,93,0	1/1:1,17:18:48.11:490,48,0	0/0:16,0:16:42.03:0,42,481	0/0:20,0:20:45.12:0,45,541	0/0:51,0:51:99:0,147,1793	0/0:22,0:22:54.17:0,54,675	0/0:18,0:18:51.16:0,51,641	0/0:24,0:24:72.22:0,72,893	0/0:21,0:21:60.18:0,60,739	0/0:21,0:21:51.16:0,51,641	0/0:26,0:26:75.21:0,75,907	0/0:9,0:9:27.09:0,27,338
chr10	96601124	.	AT	A	3136.61	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=8.300;DP=524;FS=0.373;HRun=12;HaplotypeScore=62.2400;InbreedingCoeff=0.9609;MQ=76.78;MQ0=0;MQRankSum=-0.277;QD=16.00;ReadPosRankSum=2.219;VQSLOD=4.6880;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.13:0,66,670	0/0:9,0:10:26.89:0,27,258	0/0:11,0:10:11.27:0,11,78	0/0:13,0:12:5.16:0,5,55	0/0:28,1:29:42.88:0,43,611	1/1:3,18:21:50.80:395,51,0	1/1:6,8:14:14.91:116,15,0	0/0:35,2:37:31.67:0,32,667	1/1:3,11:14:32.87:255,33,0	1/1:2,20:23:60.82:451,61,0	1/1:6,15:21:38.80:302,39,0	1/1:1,15:17:43.87:331,44,0	1/1:4,5:10:16.95:122,17,0	1/1:1,11:12:26.88:209,27,0	0/0:22,1:23:33.88:0,34,525	0/0:14,1:15:15.75:0,16,317	0/0:3,0:21:39.91:0,40,208	0/0:2,0:12:19.89:0,20,100	0/0:12,0:12:18.04:0,18,183	0/0:14,0:14:18.04:0,18,344	0/0:17,2:19:24.84:0,25,425	1/1:0,18:18:53.75:413,54,0	1/1:6,17:23:50.80:395,51,0	1/1:4,19:23:47.80:371,48,0	0/0:23,0:25:50.90:0,51,485	0/0:16,1:17:9.82:0,10,276	0/0:25,1:26:42.86:0,43,605	0/0:18,0:18:51.08:0,51,509
chr10	96603453	.	AGTC	A	1127.34	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.593;DP=677;FS=0.769;HRun=0;HaplotypeScore=94.4966;InbreedingCoeff=0.9955;MQ=90.01;MQ0=0;MQRankSum=-2.491;QD=32.21;ReadPosRankSum=1.541;VQSLOD=4.0290;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,2352	0/0:6,0:6:18.06:0,18,408	0/0:31,0:31:84.27:0,84,1762	0/0:24,0:24:72.14:0,72,1502	0/0:37,0:37:99:0,108,2338	0/0:25,0:25:75.17:0,75,1558	0/0:31,0:31:90.29:0,90,1967	0/0:25,0:25:69.19:0,69,1493	0/0:21,0:21:60.15:0,60,1267	0/0:27,0:27:75.26:0,75,1695	0/0:34,0:34:99:0,99,2163	0/0:23,0:23:63.22:0,63,1395	0/0:15,0:15:39.13:0,39,883	0/0:21,0:21:60.21:0,60,1333	0/0:31,0:31:93.32:0,93,2079	0/0:21,0:21:63.22:0,63,1427	1/1:0,21:21:42.14:699,42,0	1/1:1,13:14:33.11:550,33,0	0/0:34,0:34:93.26:0,93,1989	0/0:21,0:21:63.22:0,63,1408	0/0:37,0:37:99:0,102,2207	0/0:21,0:21:57.20:0,57,1284	0/0:26,0:26:75.17:0,75,1581	0/0:18,0:18:51.16:0,51,1111	0/0:14,0:14:42.14:0,42,933	0/0:28,0:28:78.27:0,78,1751	0/0:25,0:25:69.24:0,69,1560	0/0:11,0:11:33.11:0,33,747
chr10	96603564	.	C	CT	8131.30	PASS	AB=0.975;AC=38;AF=0.679;AN=56;BaseQRankSum=-11.202;DP=664;FS=4.803;HRun=11;HaplotypeScore=76.5293;InbreedingCoeff=0.8540;MQ=83.42;MQ0=0;MQRankSum=0.111;QD=17.34;ReadPosRankSum=1.268;VQSLOD=5.9495;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,29:36:45.90:647,46,0	1/1:2,8:10:21.04:213,21,0	0/0:18,0:22:29.04:0,29,192	0/1:18,0:17:9.90:10,0,16	1/1:4,30:35:86.77:810,87,0	1/1:3,16:20:41.92:409,42,0	1/1:5,21:26:33.88:524,34,0	0/0:38,1:39:80.60:0,81,625	1/1:7,20:27:34.63:498,35,0	1/1:9,25:34:66.12:663,66,0	1/1:4,10:14:30.02:294,30,0	1/1:2,16:18:36.06:361,36,0	1/1:5,15:20:33.06:334,33,0	1/1:4,11:15:3.83:216,4,0	1/1:1,20:21:33.07:335,33,0	1/1:6,15:21:18.85:373,19,0	0/1:23,0:23:0.61:1,0,189	0/0:18,0:18:16.20:0,16,170	0/0:30,1:32:52.26:0,52,577	0/0:23,0:25:60.85:0,61,453	0/0:14,0:14:35.85:0,36,278	1/1:6,15:23:30.54:461,31,0	1/1:5,21:26:15.39:343,15,0	1/1:6,16:22:15.84:342,16,0	1/1:1,20:22:50.94:502,51,0	1/1:9,28:37:60.93:799,61,0	0/0:30,0:32:72.75:0,73,546	0/0:13,0:13:20.86:0,21,162
chr10	96603742	.	CGTGT	C	6405	PASS	AB=0.584;AC=29;AF=0.518;AN=56;BaseQRankSum=-10.163;DP=682;FS=1.829;HRun=0;HaplotypeScore=137.6170;InbreedingCoeff=0.4992;MQ=63.95;MQ0=10;MQRankSum=1.847;QD=14.66;ReadPosRankSum=3.286;VQSLOD=4.6200;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,2:39:85.55:86,0,155	0/1:0,2:6:30.78:80,0,31	0/0:45,0:18:21.07:0,21,414	0/0:44,0:22:24.06:0,24,425	0/1:9,3:35:78.67:79,0,192	1/1:10,17:27:29.16:753,29,0	1/1:7,11:21:32.36:590,32,0	0/0:22,0:22:27.07:0,27,477	1/1:7,15:22:32.58:666,33,0	1/1:16,10:26:33.10:499,33,0	1/1:13,16:30:51.16:783,51,0	1/1:6,10:19:36.10:520,36,0	1/1:7,12:20:17.54:424,18,0	1/1:11,13:25:33.11:512,33,0	0/1:9,2:26:97.85:98,0,125	0/1:6,2:21:91.66:92,0,96	0/0:13,0:17:12.04:0,12,209	0/0:7,0:14:21.04:0,21,354	0/0:16,0:19:18.47:0,18,273	0/0:11,0:21:30.10:0,30,601	0/0:18,0:30:24.02:0,24,440	1/1:8,8:16:24.08:388,24,0	1/1:8,9:19:20.91:298,21,0	1/1:16,13:29:21.07:339,21,0	0/1:6,1:23:7.02:7,0,130	0/1:13,5:30:99:192,0,120	0/0:4,0:23:51.17:0,51,889	0/0:2,0:8:15.05:0,15,263
chr10	96604369	.	G	GT	1766.74	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.894;DP=566;FS=16.113;HRun=1;HaplotypeScore=53.8195;InbreedingCoeff=0.9945;MQ=80.22;MQ0=0;MQRankSum=-0.799;QD=36.06;ReadPosRankSum=1.795;VQSLOD=2.0102;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1321	0/0:10,0:10:30.10:0,30,389	0/0:21,0:21:49.85:0,50,578	0/0:15,0:15:17.85:0,18,398	0/0:14,0:14:42.14:0,42,543	0/0:18,0:18:54.17:0,54,698	0/0:25,0:25:75.20:0,75,941	0/0:24,0:24:69.22:0,69,893	0/0:26,0:26:75.24:0,75,972	0/0:28,0:28:81.25:0,81,1036	0/0:9,0:9:27.09:0,27,350	0/0:15,0:15:45.15:0,45,584	0/0:15,0:15:42.14:0,42,545	0/0:20,0:20:57.19:0,57,740	0/0:27,0:27:81.26:0,81,1051	0/0:18,0:18:54.18:0,54,700	1/1:0,29:29:72.24:1079,72,0	1/1:0,20:20:54.18:809,54,0	0/0:21,0:21:60.19:0,60,777	0/0:11,0:11:30.10:0,30,390	0/0:25,0:25:69.21:0,69,881	0/0:19,0:19:51.15:0,51,646	0/0:14,0:14:42.13:0,42,537	0/0:23,0:23:69.20:0,69,878	0/0:13,0:13:39.12:0,39,497	0/0:26,0:26:78.25:0,78,999	0/0:29,0:29:84.26:0,84,1073	0/0:15,0:15:45.15:0,45,584
chr10	96604486	.	AT	A	1039.46	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.732;DP=529;FS=0.641;HRun=6;HaplotypeScore=51.3353;InbreedingCoeff=0.9785;MQ=73.75;MQ0=0;MQRankSum=-0.139;QD=25.35;ReadPosRankSum=0.798;VQSLOD=3.5007;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1478	0/0:5,0:5:12.03:0,12,144	0/0:12,0:12:27.06:0,27,303	0/0:19,0:19:43.89:0,44,489	0/0:21,0:21:54.17:0,54,698	0/0:13,0:13:39.13:0,39,513	0/0:19,0:19:57.19:0,57,750	0/0:38,0:38:93.28:0,93,1188	0/0:19,0:19:57.18:0,57,731	0/0:18,0:18:51.17:0,51,670	0/0:17,0:17:49.04:0,49,633	0/0:13,0:13:39.12:0,39,501	0/0:20,0:20:57.17:0,57,734	0/0:23,0:23:63.20:0,63,829	0/0:21,0:21:63.20:0,63,829	0/0:23,0:23:60.20:0,60,789	1/1:2,28:30:81.20:871,81,0	1/1:0,11:11:27.07:290,27,0	0/0:24,0:24:48.16:0,48,632	0/0:16,0:16:39.13:0,39,513	0/0:18,0:18:54.18:0,54,710	0/0:9,0:9:27.08:0,27,345	0/0:12,0:12:33.09:0,33,419	0/0:23,0:23:66.21:0,66,868	0/0:18,0:18:54.18:0,54,709	0/0:22,0:22:57.19:0,57,750	0/0:18,0:17:54.18:0,54,705	0/0:7,0:7:18.06:0,18,237
chr10	96604624	.	C	CTTTTTTTCTTTTT	2879.90	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.482;DP=437;FS=39.568;HRun=0;HaplotypeScore=166.1444;InbreedingCoeff=0.9258;MQ=64.82;MQ0=2;MQRankSum=-7.580;QD=77.84;ReadPosRankSum=-2.226;VQSLOD=1.1993;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.03:0,60,1856	0/0:7,0:7:18.06:0,18,583	0/0:11,0:9:13.98:0,14,143	0/0:11,0:8:5.84:0,6,122	0/0:29,0:29:77.99:0,78,1791	0/0:11,0:11:30.10:0,30,1089	0/0:14,0:14:32.15:0,32,1096	0/0:27,0:27:45.05:0,45,1048	0/0:16,0:16:42.08:0,42,1161	0/0:19,0:19:36.10:0,36,1038	0/0:13,0:13:32.85:0,33,782	0/0:12,0:12:23.98:0,24,529	0/0:14,0:14:29.98:0,30,664	0/0:16,0:16:33.04:0,33,945	0/0:14,0:14:32.94:0,33,807	0/0:17,0:17:33.02:0,33,703	1/1:22,4:26:42.12:1934,42,0	1/1:10,1:11:25.64:1067,26,0	0/0:11,0:11:30.07:0,30,760	0/0:10,0:10:18.50:0,18,481	0/0:22,0:22:54.09:0,54,1546	0/0:10,0:10:27.01:0,27,805	0/0:18,0:18:38.93:0,39,1074	0/0:19,0:19:48.11:0,48,1346	0/0:10,0:10:27.01:0,27,851	0/0:20,0:20:54.08:0,54,1540	0/0:14,0:14:32.98:0,33,936	0/0:10,0:10:27.06:0,27,811
chr10	96604700	.	ACCC	A	10839.28	PASS	AC=40;AF=0.741;AN=54;BaseQRankSum=-6.251;DP=438;FS=2.499;HRun=10;HaplotypeScore=86.1074;InbreedingCoeff=0.9641;MQ=71.83;MQ0=2;MQRankSum=-0.699;QD=32.55;ReadPosRankSum=9.342;VQSLOD=3.3886;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,19:24:57.17:758,57,0	1/1:3,9:12:24.06:327,24,0	0/0:32,0:19:47.98:0,48,687	0/0:23,0:14:26.55:0,27,370	1/1:2,16:21:38.35:510,38,0	1/1:2,9:11:24.07:327,24,0	1/1:1,14:15:39.13:532,39,0	0/0:4,0:8:9.02:0,9,115	1/1:2,13:15:39.12:532,39,0	1/1:1,21:22:60.19:814,60,0	1/1:1,16:17:45.14:614,45,0	1/1:2,17:19:48.16:655,48,0	1/1:2,11:13:33.09:450,33,0	1/1:0,10:10:18.06:245,18,0	1/1:2,15:17:45.14:614,45,0	1/1:5,8:13:27.06:368,27,0	1/1:1,30:31:81.26:1105,81,0	1/1:1,17:18:45.10:614,45,0	0/0:3,0:5:8.24:0,8,94	./.	0/0:8,0:9:15.04:0,15,256	1/1:1,8:9:24.07:328,24,0	1/1:1,13:14:36.11:491,36,0	1/1:2,11:13:24.07:328,24,0	1/1:1,13:14:39.12:532,39,0	1/1:6,19:25:51.12:695,51,0	0/0:13,0:19:51.17:0,51,835	0/0:0,0:4:12.04:0,12,173
chr10	96604742	.	AT	A	2241.11	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-1.560;DP=430;FS=0.927;HRun=9;HaplotypeScore=81.9002;InbreedingCoeff=0.8931;MQ=62.63;MQ0=2;MQRankSum=-0.374;QD=18.07;ReadPosRankSum=-2.218;VQSLOD=3.2051;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:28:71.99:648,72,0	0/0:5,0:5:8.58:0,9,44	0/0:24,0:18:44.86:0,45,423	0/0:18,0:10:20.27:0,20,252	0/0:18,0:17:27.66:0,28,161	0/0:18,0:18:48.14:0,48,554	0/0:12,0:12:36.11:0,36,415	1/1:1,19:20:57.02:517,57,0	0/0:15,0:16:35.94:0,36,395	0/0:24,0:24:51.14:0,51,581	0/0:15,0:15:42.08:0,42,470	0/0:15,0:15:45.12:0,45,510	0/0:14,0:14:30.06:0,30,324	0/0:9,0:9:24.03:0,24,262	0/0:15,0:15:7.97:0,8,142	1/1:1,8:9:24:216,24,0	0/0:31,0:31:72.19:0,72,817	0/0:23,0:23:60.16:0,60,680	1/1:1,6:7:18.01:165,18,0	1/1:2,11:12:32.96:292,33,0	1/1:1,8:9:18:161,18,0	0/0:7,0:7:14.99:0,15,148	0/0:13,0:13:33.09:0,33,372	0/0:10,0:10:24.07:0,24,274	0/1:18,0:18:8.46:8,0,160	0/0:18,0:18:17.25:0,17,182	1/1:2,12:14:33.49:302,33,0	1/1:0,6:6:15.01:137,15,0
chr10	96605820	.	C	CAG	434.98	PASS	AB=0.756;AC=2;AF=0.036;AN=56;BaseQRankSum=1.609;DP=786;FS=1.017;HRun=0;HaplotypeScore=161.4451;InbreedingCoeff=0.2637;MQ=54.33;MQ0=10;MQRankSum=-5.854;QD=16.11;ReadPosRankSum=0.635;VQSLOD=3.7317;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,120,1755	0/0:12,0:12:27.09:0,27,413	0/0:27,0:15:41.65:0,42,515	0/0:35,0:17:29.65:0,30,437	0/0:25,0:25:51.11:0,51,726	0/0:26,0:26:47.69:0,48,702	0/0:33,0:32:72.24:0,72,1092	0/0:43,0:42:95.03:0,95,1528	0/0:30,0:30:63.20:0,63,940	0/0:24,0:24:72.23:0,72,1079	0/0:25,0:24:51.13:0,51,714	0/0:21,0:21:60.17:0,60,887	0/0:34,0:34:90.29:0,90,1354	0/0:26,0:26:54.18:0,54,824	0/0:41,0:41:99:0,114,1678	0/0:33,0:33:92.85:0,93,1388	0/1:10,3:11:2.70:125,0,3	0/1:8,6:14:20.86:399,0,21	0/0:15,0:13:37.90:0,38,480	0/0:28,0:28:55.32:0,55,755	0/0:44,0:44:72.10:0,72,1002	0/0:20,0:20:45.13:0,45,665	0/0:29,0:29:66.19:0,66,959	0/0:53,0:53:99:0,105,1598	0/0:26,0:26:50.98:0,51,736	0/0:34,0:34:99:0,102,1434	0/0:23,0:23:43.80:0,44,621	0/0:7,0:7:12.04:0,12,179
chr10	96605832	.	CAG	C	218.57	PASS	AB=0.987;AC=9;AF=0.161;AN=56;BaseQRankSum=3.018;DP=804;FS=0.000;HRun=0;HaplotypeScore=176.8665;InbreedingCoeff=0.3076;MQ=50.39;MQ0=20;MQRankSum=-3.009;QD=1.45;ReadPosRankSum=-4.026;VQSLOD=0.8504;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:43.42:0,43,756	0/0:10,0:10:27.09:0,27,469	0/0:32,0:10:20.63:0,21,227	0/0:40,0:10:17.28:0,17,160	0/0:26,0:26:57.11:0,57,896	0/0:28,0:28:26.10:0,26,477	0/0:34,0:33:60.05:0,60,817	0/1:40,1:39:49.03:49,0,797	0/0:27,0:27:59.82:0,60,965	0/0:23,0:23:45.25:0,45,956	0/0:26,0:25:41.51:0,42,748	0/0:18,0:18:47.22:0,47,598	0/0:36,0:36:85.62:0,86,1110	0/0:29,0:29:36.68:0,37,770	0/0:44,0:43:99:0,117,1811	0/0:33,0:33:9.68:0,10,413	1/1:12,0:11:5.87:36,6,0	1/1:7,3:10:9.80:152,10,0	0/1:15,0:12:43.55:44,0,90	0/0:24,0:24:38.96:0,39,383	0/1:43,0:43:63.89:64,0,398	0/0:23,0:23:39.30:0,39,676	0/0:30,0:30:54.82:0,55,832	0/0:52,0:52:96.21:0,96,1584	0/0:27,0:27:33.31:0,33,888	0/0:41,0:40:95.35:0,95,1538	0/1:23,1:24:3.08:3,0,270	0/1:6,0:6:5.73:6,0,78
chr10	96605834	.	G	GACAC	3096.44	PASS	AB=0.754;AC=15;AF=0.268;AN=56;BaseQRankSum=-8.217;DP=798;FS=19.399;HRun=0;HaplotypeScore=196.1366;InbreedingCoeff=0.8156;MQ=50.09;MQ0=20;MQRankSum=-1.141;QD=17.40;ReadPosRankSum=-5.808;VQSLOD=1.2079;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:50:92.15:0,92,1217	0/0:11,0:11:24.03:0,24,284	0/0:30,0:7:14.62:0,15,167	0/0:39,0:8:11.02:0,11,96	0/0:25,0:25:51.10:0,51,617	0/0:28,0:28:24.16:0,24,387	0/0:32,0:32:29.64:0,30,444	0/1:31,13:44:42.41:658,0,42	0/0:28,0:28:43.70:0,44,564	0/0:24,0:24:33.91:0,34,627	0/0:28,0:27:36.57:0,37,454	0/0:17,0:17:27.02:0,27,327	0/0:34,0:34:48.83:0,49,651	0/0:26,0:26:36.56:0,37,461	0/0:43,0:43:84.22:0,84,1038	0/0:31,0:31:63.73:0,64,979	1/1:10,0:10:1.72:4,2,0	1/1:8,0:8:2.70:24,3,0	1/1:6,9:12:29.91:490,30,0	1/1:10,12:24:26.83:599,27,0	1/1:30,10:42:50.39:904,50,0	0/0:23,0:23:26.90:0,27,351	0/0:30,0:30:36.11:0,36,489	0/0:53,0:53:78.23:0,78,983	0/0:26,0:26:53.92:0,54,692	0/0:40,0:39:85.04:0,85,1026	1/1:7,16:27:21.28:446,21,0	1/1:4,1:6:8.52:153,9,0
chr10	96605856	.	C	CGA	10665.17	PASS	AB=0.671;AC=32;AF=0.571;AN=56;BaseQRankSum=-4.594;DP=815;FS=19.947;HRun=0;HaplotypeScore=181.6094;InbreedingCoeff=0.4620;MQ=48.59;MQ0=31;MQRankSum=3.764;QD=18.78;ReadPosRankSum=5.011;VQSLOD=3.5672;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:51,0:51:43.66:783,44,0	0/1:2,9:11:9.55:347,0,10	0/0:40,0:9:15:0,15,142	0/0:46,0:10:20.96:0,21,198	0/1:12,13:26:22.83:579,0,23	0/1:17,8:26:10.18:204,0,10	1/1:28,5:32:12.52:200,13,0	0/0:34,0:32:37.06:0,37,531	1/1:15,11:27:44.38:662,44,0	1/1:24,11:35:32.53:861,33,0	0/1:13,15:27:6.26:406,0,6	1/1:13,3:16:23.75:323,24,0	1/1:17,10:27:21.97:658,22,0	0/1:16,11:27:3.54:387,0,4	1/1:22,16:37:44.65:1200,45,0	1/1:32,0:32:42.37:430,42,0	0/1:1,0:4:3.94:44,0,4	1/1:3,0:6:6.40:92,6,0	0/0:19,0:17:35.01:0,35,308	0/0:25,0:25:48.36:0,48,443	0/0:40,0:40:65.74:0,66,667	0/1:16,9:25:15.98:242,0,16	0/1:12,13:25:67.62:311,0,68	1/1:37,16:53:68.72:1019,69,0	1/1:11,23:34:29.84:486,30,0	1/1:7,37:43:60.95:1431,61,0	0/0:31,0:31:48.21:0,48,500	0/0:11,0:10:16.57:0,17,169
chr10	96605905	.	CAGAG	C	6347.74	PASS	AB=0.986;AC=24;AF=0.429;AN=56;BaseQRankSum=10.038;DP=808;FS=2.184;HRun=0;HaplotypeScore=215.2542;InbreedingCoeff=0.8416;MQ=57.17;MQ0=12;MQRankSum=-2.796;QD=18.45;ReadPosRankSum=0.502;VQSLOD=4.6760;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,129,3358	0/0:9,0:9:27.04:0,27,585	0/1:35,0:13:22.82:23,0,479	0/0:68,0:18:4.36:0,4,236	0/0:26,0:25:69.11:0,69,1641	1/1:1,20:21:11.64:457,12,0	1/1:3,27:30:26.72:406,27,0	0/0:38,0:37:99:0,99,2307	1/1:2,22:24:16.31:298,16,0	1/1:2,33:34:93.32:1775,93,0	1/1:2,16:18:11.26:98,11,0	1/1:1,21:22:25.02:453,25,0	1/1:0,28:28:51.76:853,52,0	1/1:2,23:25:36.47:631,36,0	0/0:27,0:26:78.25:0,78,2002	0/0:27,0:27:75.26:0,75,2014	0/0:5,0:5:9.01:0,9,186	0/1:7,0:7:2.03:2,0,69	0/0:25,0:20:60.20:0,60,1473	0/0:29,0:29:68.74:0,69,1626	0/0:50,0:50:99:0,132,3165	1/1:2,23:25:22.64:424,23,0	1/1:1,24:25:20.21:290,20,0	1/1:4,44:48:39.78:637,40,0	0/0:21,0:21:44.65:0,45,1087	0/0:38,0:37:99:0,102,2492	0/0:31,0:31:63.13:0,63,1646	0/0:23,0:23:66.23:0,66,1695
chr10	96605946	.	GAC	G	33.83	PASS	AB=0.960;AC=5;AF=0.089;AN=56;BaseQRankSum=5.164;DP=837;FS=0.990;HRun=0;HaplotypeScore=176.4446;InbreedingCoeff=0.1860;MQ=56.30;MQ0=12;MQRankSum=-2.943;QD=0.42;ReadPosRankSum=-3.703;VQSLOD=1.8599;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,99,1552	0/0:11,0:11:32.52:0,33,404	0/0:64,0:27:52.52:0,53,719	0/0:77,0:31:41.74:0,42,601	0/0:23,1:23:16.02:0,16,806	0/0:20,0:20:32.09:0,32,466	0/1:27,1:28:57.70:58,0,297	0/0:46,2:48:42.48:0,42,1460	0/0:21,0:21:31.44:0,31,466	0/0:43,0:42:98.72:0,99,1445	0/1:18,1:19:17.10:17,0,279	0/0:27,0:27:37.99:0,38,551	0/0:32,0:32:46.19:0,46,746	0/0:19,0:19:33.06:0,33,468	0/0:26,0:26:65.78:0,66,992	0/0:30,0:30:57.18:0,57,922	0/0:5,0:4:3.73:0,4,16	1/1:6,0:6:2.24:32,2,0	0/0:12,0:12:21.05:0,21,318	0/0:32,0:32:68.32:0,68,1093	0/0:55,0:55:99:0,114,1793	0/0:25,0:25:30.07:0,30,433	0/1:27,1:28:37.32:37,0,562	0/0:44,0:44:52.87:0,53,805	0/0:17,0:18:19.64:0,20,624	0/0:28,0:28:71.88:0,72,1028	0/0:24,0:24:38.96:0,39,528	0/0:26,0:26:66.19:0,66,1038
chr10	96605980	.	CAGAG	C	124.20	PASS	AB=0.683;AC=2;AF=0.036;AN=56;BaseQRankSum=5.925;DP=810;FS=13.810;HRun=0;HaplotypeScore=199.7505;InbreedingCoeff=0.0428;MQ=63.56;MQ0=16;MQRankSum=-2.337;QD=6.54;ReadPosRankSum=-2.622;VQSLOD=1.4829;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:87.30:0,87,2218	0/0:8,0:8:21.07:0,21,536	0/0:56,0:29:48.61:0,49,981	0/0:90,0:39:10.31:0,10,737	0/0:28,0:27:60.20:0,60,1508	0/0:20,0:20:39.08:0,39,929	0/0:30,0:29:48.14:0,48,1205	0/0:34,0:33:81.22:0,81,1949	0/0:20,0:19:30.10:0,30,753	0/0:30,0:27:78.25:0,78,1836	0/0:17,0:17:26.81:0,27,683	0/0:20,0:20:24.08:0,24,633	0/0:25,0:25:27.09:0,27,703	0/0:18,0:18:11.97:0,12,256	0/0:33,0:33:87.23:0,87,2058	0/0:30,0:30:60.21:0,60,1484	0/1:4,3:6:26.55:69,0,27	0/1:6,5:12:10.06:144,0,10	0/0:13,0:11:29.92:0,30,520	0/0:32,0:32:72.07:0,72,1797	0/0:58,0:57:99:0,129,3037	0/0:25,0:25:23.91:0,24,633	0/0:30,0:30:48.01:0,48,1262	0/0:35,0:35:41.98:0,42,1108	0/0:18,0:18:42.14:0,42,1069	0/0:32,0:33:93.31:0,93,2278	0/0:26,0:26:50.66:0,51,1145	0/0:21,0:21:60.21:0,60,1510
chr10	96606006	.	AAG	A	7941.62	PASS	AB=0.998;AC=45;AF=0.804;AN=56;BaseQRankSum=-4.034;DP=721;FS=0.000;HRun=0;HaplotypeScore=151.5417;InbreedingCoeff=-0.0427;MQ=64.55;MQ0=28;MQRankSum=3.061;QD=11.19;ReadPosRankSum=2.697;VQSLOD=4.4196;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,23:38:48.08:570,48,0	1/1:3,7:10:14.56:181,15,0	0/1:58,0:26:10.43:10,0,210	0/1:89,1:33:25.10:25,0,74	1/1:4,18:22:42.04:472,42,0	0/1:16,0:16:6.62:54,0,7	0/1:23,0:21:25.87:75,0,26	1/1:11,20:29:42.13:508,42,0	1/1:15,0:14:9.51:42,10,0	0/1:30,0:24:32.12:112,0,32	0/0:11,0:11:2.94:0,3,25	0/1:11,0:11:24.42:64,0,24	0/1:21,0:21:0.62:57,0,1	0/1:15,0:15:1.78:55,0,2	1/1:5,22:27:57.17:692,57,0	1/1:3,24:28:50.99:596,51,0	1/1:2,4:6:8.96:91,9,0	1/1:6,6:12:17.04:172,17,0	1/1:4,13:17:39.08:455,39,0	1/1:7,21:28:50.94:583,51,0	1/1:16,36:50:72.22:874,72,0	0/1:17,0:17:13.32:103,0,13	1/1:24,0:24:8.42:52,8,0	1/1:25,0:25:8.37:54,8,0	1/1:9,4:13:24.06:271,24,0	1/1:8,26:33:81.06:910,81,0	1/1:1,26:28:45.85:609,46,0	1/1:10,8:17:21.06:255,21,0
chr10	96606024	.	GAC	G	5015.60	PASS	AB=0.996;AC=38;AF=0.679;AN=56;BaseQRankSum=5.803;DP=686;FS=0.441;HRun=0;HaplotypeScore=163.6593;InbreedingCoeff=-0.2128;MQ=53.35;MQ0=29;MQRankSum=2.657;QD=8.40;ReadPosRankSum=10.169;VQSLOD=3.5761;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:58.38:161,0,58	0/1:11,0:11:39.44:59,0,39	0/0:31,0:9:3.65:0,4,155	0/0:58,0:11:1.68:0,2,44	0/1:30,0:30:99:99,0,145	1/1:12,4:15:28.51:287,29,0	1/1:19,5:22:27.27:309,27,0	0/1:40,0:37:99:114,0,254	1/1:14,4:17:29.23:250,29,0	1/1:17,10:20:55.42:558,55,0	1/1:15,2:17:20.85:164,21,0	1/1:13,2:15:11.68:240,12,0	1/1:1,20:20:22.25:205,22,0	1/1:1,14:15:19.08:190,19,0	0/1:31,0:31:99:155,0,120	0/1:30,0:30:26.46:146,0,26	0/1:10,0:10:17.64:18,0,72	0/1:15,0:15:39.65:72,0,40	0/1:18,0:15:2.28:116,0,2	0/1:27,0:27:29.62:139,0,30	0/1:46,0:44:2.45:225,0,2	1/1:17,4:22:23.06:394,23,0	1/1:13,7:20:26.53:250,27,0	1/1:18,5:23:32.64:314,33,0	0/1:10,0:10:25.97:49,0,26	0/1:32,2:32:12.86:255,0,13	0/1:33,0:33:67.52:165,0,68	1/1:11,0:9:2.86:83,3,0
chr10	96606028	.	GAGAGAGAGAC	G	1831.64	PASS	AB=0.971;AC=25;AF=0.463;AN=54;BaseQRankSum=8.603;DP=684;FS=1.660;HRun=0;HaplotypeScore=248.8742;InbreedingCoeff=0.8373;MQ=51.90;MQ0=28;MQRankSum=-4.952;QD=6.68;ReadPosRankSum=-2.813;VQSLOD=2.2504;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:69.16:0,69,2161	0/0:12,0:12:18.06:0,18,536	1/1:26,0:7:2.37:8,2,0	./.	0/0:30,0:30:63.22:0,63,2096	1/1:14,2:15:8.87:59,9,0	1/1:20,0:18:13.67:127,14,0	0/0:42,0:39:72.11:0,72,1335	1/1:14,4:17:22.89:175,23,0	1/1:22,5:21:34.95:459,35,0	1/1:15,1:16:11.88:88,12,0	1/1:13,1:14:3.20:57,3,0	1/1:17,4:20:20.65:312,21,0	1/1:12,4:16:15.05:219,15,0	0/0:33,0:33:87.23:0,87,2333	0/0:31,0:31:60.19:0,60,1784	0/0:10,0:10:17.50:0,18,187	0/0:17,0:17:11.12:0,11,408	0/0:19,0:16:35.48:0,35,1008	0/0:28,0:28:63.17:0,63,1580	0/0:48,0:46:90.23:0,90,2702	1/1:22,0:22:21.83:214,22,0	1/1:17,4:21:9.48:72,9,0	1/1:23,0:23:17.62:202,18,0	0/0:10,0:10:18.04:0,18,561	0/1:33,1:32:50.28:50,0,2097	0/0:35,0:35:75.24:0,75,2438	0/0:11,0:9:24.08:0,24,1042
chr10	96606048	.	C	CAG	682.90	PASS	AB=0.757;AC=6;AF=0.107;AN=56;BaseQRankSum=2.406;DP=658;FS=14.837;HRun=0;HaplotypeScore=171.0667;InbreedingCoeff=0.5530;MQ=53.13;MQ0=18;MQRankSum=-2.416;QD=7.19;ReadPosRankSum=-1.305;VQSLOD=2.0149;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:86.61:0,87,1040	0/0:10,0:10:15.05:0,15,188	1/1:14,0:2:2.60:10,3,0	0/1:41,0:11:25.74:39,0,26	0/0:31,0:31:69.18:0,69,831	0/0:11,0:10:12.01:0,12,145	0/0:19,0:17:21.03:0,21,250	0/0:44,0:44:87.20:0,87,1037	0/0:17,0:16:29.74:0,30,310	0/0:26,0:20:36.58:0,37,438	0/0:11,0:11:12.02:0,12,132	0/0:15,0:15:12.01:0,12,123	0/0:16,0:15:11.21:0,11,157	0/0:18,0:18:30.02:0,30,301	0/0:33,0:33:66.17:0,66,796	0/0:28,0:28:51.14:0,51,616	1/1:2,14:16:21.07:341,21,0	0/1:4,16:20:4.79:415,0,5	0/0:21,0:16:30.09:0,30,370	0/0:31,0:31:63.13:0,63,731	0/0:47,0:45:92.04:0,92,1086	0/0:21,0:21:26.35:0,26,302	0/0:20,0:20:17.52:0,18,212	0/0:19,0:19:15.02:0,15,208	0/0:8,0:8:18.05:0,18,213	0/0:30,0:28:69.17:0,69,830	0/0:32,0:32:53.08:0,53,808	0/0:14,0:12:30.09:0,30,375
chr10	96606278	.	TTTTTTTTTC	T	1148.84	PASS	AB=0.968;AC=16;AF=0.286;AN=56;BaseQRankSum=5.380;DP=471;FS=40.603;HRun=0;HaplotypeScore=109.9053;InbreedingCoeff=-0.1957;MQ=56.40;MQ0=9;MQRankSum=-2.794;QD=5.27;ReadPosRankSum=-0.353;VQSLOD=-0.3317;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:22.84:0,23,1747	0/1:7,0:7:3.13:3,0,379	0/0:34,0:5:9.49:0,9,195	0/0:20,0:9:15.53:0,16,142	0/0:21,0:21:63.11:0,63,1459	0/1:23,0:22:50.08:50,0,92	0/1:12,0:12:99:105,0,144	0/1:18,0:17:13.65:14,0,1159	0/1:17,0:17:50.16:50,0,101	0/1:12,0:8:8.54:94,0,9	0/1:15,0:15:25.62:26,0,49	0/1:10,0:10:14.33:14,0,23	0/1:15,0:15:58.83:59,0,164	0/1:8,0:8:99:113,0,139	0/0:16,0:16:20.97:0,21,1142	0/0:13,0:13:36.10:0,36,974	0/1:4,18:22:16.88:336,0,17	1/1:15,2:16:20.82:307,21,0	0/1:13,0:13:4.05:4,0,703	0/0:21,0:21:55.99:0,56,1397	0/1:7,0:7:5.18:5,0,397	0/0:10,0:10:11.96:0,12,116	0/0:16,0:16:13.04:0,13,185	0/1:22,0:21:75.65:126,0,76	0/0:14,0:13:12.46:0,12,781	0/0:14,0:14:39.07:0,39,864	0/0:22,0:21:6.54:0,7,1079	0/0:13,0:10:6.50:0,7,498
chr10	96606279	.	TTTTTTTTC	T	1566.72	PASS	AB=0.988;AC=22;AF=0.393;AN=56;BaseQRankSum=4.230;DP=447;FS=52.603;HRun=0;HaplotypeScore=97.2436;InbreedingCoeff=-0.0378;MQ=56.45;MQ0=9;MQRankSum=-1.574;QD=5.50;ReadPosRankSum=0.515;VQSLOD=-0.2843;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:41:34.40:34,0,1410	0/1:7,0:7:3.64:4,0,295	0/0:32,0:6:12.17:0,12,183	0/0:19,0:9:18.44:0,18,137	0/0:21,0:21:43.27:0,43,1169	0/1:20,0:19:25.38:108,0,25	0/1:10,1:10:36.70:169,0,37	0/1:18,0:17:30.32:30,0,974	0/1:14,1:15:0.21:147,0,0	1/1:11,1:8:13.96:153,14,0	0/1:13,0:13:12.13:29,0,12	0/1:9,0:9:0.65:29,0,1	0/1:14,0:14:76.45:116,0,76	0/1:8,0:8:60.65:138,0,61	0/0:16,0:16:20.95:0,21,947	0/0:12,0:12:33.11:0,33,786	0/1:19,1:20:1.08:293,0,1	1/1:12,0:11:18.42:249,18,0	0/1:14,0:14:24.80:25,0,570	0/0:20,0:20:30.12:0,30,1081	0/1:7,0:7:5.22:5,0,334	0/1:11,0:11:13.70:14,0,28	0/1:14,0:14:3.26:3,0,99	1/1:19,0:18:4.62:184,5,0	0/0:14,0:13:7.18:0,7,608	0/0:14,0:14:33.95:0,34,669	0/1:20,0:20:0.31:0,0,827	0/0:13,0:10:6.45:0,6,398
chr10	96606280	.	TTTTTTTC	T	1962.65	PASS	AB=0.951;AC=30;AF=0.536;AN=56;BaseQRankSum=3.103;DP=424;FS=44.652;HRun=0;HaplotypeScore=86.1370;InbreedingCoeff=0.1685;MQ=57.19;MQ0=9;MQRankSum=-1.689;QD=6.54;ReadPosRankSum=0.950;VQSLOD=-0.0502;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:41:58.62:59,0,1112	0/1:7,0:7:4.15:4,0,218	0/0:32,0:6:12.16:0,12,159	0/0:17,0:9:5.61:0,6,110	0/1:22,0:22:8.40:8,0,846	1/1:3,14:16:8.79:152,9,0	1/1:8,2:9:20.40:259,20,0	0/1:18,0:17:32.99:33,0,782	1/1:11,0:11:20.29:192,20,0	1/1:9,0:6:14.32:138,14,0	1/1:11,0:11:5.67:39,6,0	1/1:7,0:7:6:61,6,0	0/1:13,0:13:2.30:151,0,2	0/1:5,0:6:9.77:122,0,10	0/0:16,0:16:20.89:0,21,760	0/0:12,0:12:33.11:0,33,641	1/1:20,0:20:14.83:272,15,0	1/1:12,0:11:20.94:256,21,0	0/1:14,0:14:31.59:32,0,431	0/0:19,0:19:28.75:0,29,845	0/1:7,0:7:5.70:6,0,261	0/1:9,0:9:11.76:14,0,12	0/1:3,11:14:28.33:28,0,51	1/1:15,2:16:24.99:284,25,0	0/1:15,0:14:32.86:33,0,454	0/0:14,0:14:30.52:0,31,517	0/1:20,0:20:1.24:1,0,633	0/0:13,0:10:3.41:0,3,284
chr10	96606281	.	TTTTTTC	T	2034.43	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=2.901;DP=411;FS=49.821;HRun=0;HaplotypeScore=80.0289;InbreedingCoeff=0.2221;MQ=57.22;MQ0=8;MQRankSum=-1.638;QD=6.92;ReadPosRankSum=1.210;VQSLOD=-0.2950;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:41:67.89:68,0,822	0/1:6,0:6:8.95:9,0,134	0/0:29,0:8:18.15:0,18,183	0/0:17,0:8:0.88:0,1,71	0/1:22,0:22:29.71:30,0,590	1/1:16,0:15:9:123,9,0	1/1:8,0:7:20.84:226,21,0	0/1:20,0:19:68.99:69,0,606	1/1:10,0:10:20.04:174,20,0	1/1:11,0:8:20.30:172,20,0	1/1:0,11:11:5.89:39,6,0	1/1:7,0:7:11.76:81,12,0	1/1:8,1:9:16.17:156,16,0	1/1:4,0:4:8.52:122,9,0	0/0:16,0:16:20.18:0,20,581	0/0:13,0:13:9.71:0,10,461	1/1:20,0:20:15.01:245,15,0	1/1:12,0:11:20.94:240,21,0	0/1:14,0:14:73.58:74,0,302	0/0:18,0:18:22.41:0,22,594	0/1:7,0:7:8.26:8,0,185	1/1:10,0:10:2.76:19,3,0	0/1:13,0:13:17.11:17,0,17	1/1:16,0:15:25.23:251,25,0	0/1:17,0:16:83.42:83,0,319	0/0:12,0:12:21.85:0,22,369	0/1:20,0:20:11.04:11,0,463	0/0:12,0:9:1.53:0,2,170
chr10	96606285	.	TTC	T	3105.80	PASS	AB=0.989;AC=43;AF=0.768;AN=56;BaseQRankSum=1.758;DP=407;FS=88.674;HRun=0;HaplotypeScore=57.4418;InbreedingCoeff=-0.1613;MQ=56.42;MQ0=9;MQRankSum=-0.117;QD=8.15;ReadPosRankSum=7.025;VQSLOD=-0.7264;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:37:70.65:246,0,71	1/1:3,2:5:1.36:77,1,0	0/0:26,0:8:17.15:0,17,119	0/1:19,1:10:19.55:20,0,89	0/1:20,0:20:43.90:142,0,44	1/1:16,0:15:8.96:69,9,0	1/1:8,0:7:20.79:146,21,0	0/1:20,0:19:69.78:160,0,70	1/1:10,0:10:20.23:157,20,0	1/1:15,0:12:32.29:253,32,0	1/1:11,0:11:5.93:39,6,0	1/1:9,0:9:17.53:129,18,0	1/1:8,0:8:20.84:157,21,0	1/1:4,0:4:11.96:94,12,0	0/1:15,0:15:47.09:85,0,47	0/1:9,0:9:35.42:48,0,35	1/1:20,0:20:14.95:115,15,0	1/1:13,0:12:23.75:180,24,0	0/1:11,0:12:22.73:106,0,23	0/1:16,0:16:48.73:86,0,49	0/1:8,0:8:20.39:82,0,20	1/1:13,0:13:11.87:79,12,0	1/1:12,0:12:2.11:19,2,0	1/1:16,0:15:28.94:219,29,0	1/1:17,1:17:3.34:222,3,0	0/1:12,0:12:14.87:100,0,15	0/1:20,0:20:5.31:146,0,5	1/1:14,0:11:10.48:85,10,0
chr10	96606286	.	TC	T	3820.17	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-3.365;DP=383;FS=7.390;HRun=3;HaplotypeScore=50.7436;InbreedingCoeff=0.4990;MQ=56.10;MQ0=9;MQRankSum=0.596;QD=10.64;ReadPosRankSum=2.249;VQSLOD=1.2470;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:35.10:308,35,0	1/1:5,0:5:8.87:65,9,0	0/0:24,0:8:15.13:0,15,111	0/1:19,0:9:6.98:7,0,83	1/1:18,0:18:28.13:195,28,0	1/1:16,0:15:8.82:55,9,0	1/1:8,0:7:20.60:126,21,0	1/1:21,1:21:35.66:248,36,0	1/1:10,0:10:20.76:146,21,0	1/1:15,0:12:32.22:246,32,0	1/1:11,0:11:5.93:39,6,0	1/1:9,0:9:17.75:129,18,0	1/1:8,0:8:20.79:150,21,0	1/1:4,0:4:11.81:81,12,0	1/1:10,0:10:17.88:135,18,0	1/1:8,0:8:14.87:110,15,0	1/1:20,0:20:14.65:87,15,0	1/1:14,0:13:26.53:183,27,0	1/1:11,0:11:17.88:133,18,0	1/1:14,0:14:18.50:122,19,0	1/1:9,0:9:17.97:148,18,0	1/1:2,11:13:11.87:79,12,0	1/1:11,0:11:2.98:21,3,0	1/1:16,0:15:29.25:206,29,0	1/1:16,1:17:32.91:279,33,0	1/1:10,0:10:22.42:160,22,0	1/1:15,1:17:36.97:272,37,0	1/1:12,0:9:14.23:92,14,0
chr10	96606427	.	A	ATT	6155.06	PASS	AB=0.780;AC=36;AF=0.643;AN=56;BaseQRankSum=-12.073;DP=523;FS=0.385;HRun=10;HaplotypeScore=89.8132;InbreedingCoeff=0.8885;MQ=66.34;MQ0=0;MQRankSum=2.270;QD=18.05;ReadPosRankSum=-2.067;VQSLOD=3.3559;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:27:44.79:158,45,0	0/1:3,0:14:2.04:95,0,2	0/0:16,0:15:16.68:0,17,175	0/1:5,0:5:4.04:4,0,6	1/1:6,0:27:47.77:178,48,0	1/1:6,13:20:41.63:590,42,0	1/1:3,11:14:30.10:441,30,0	0/0:6,0:22:43.78:0,44,189	1/1:2,11:13:21.07:306,21,0	1/1:4,26:31:75.24:1082,75,0	1/1:3,17:23:59.31:712,59,0	1/1:3,6:11:30.05:388,30,0	1/1:3,8:11:12.04:179,12,0	1/1:2,13:15:27.09:402,27,0	1/1:6,1:16:26.16:146,26,0	1/1:5,0:25:39.93:140,40,0	0/0:2,0:27:61.26:0,61,265	0/0:0,0:24:57.26:0,57,247	0/0:2,0:19:36.45:0,36,162	0/0:2,0:24:51.97:0,52,238	0/0:1,0:18:43.91:0,44,190	1/1:1,14:15:33.03:441,33,0	1/1:3,14:19:28.24:329,28,0	1/1:2,17:20:24.08:358,24,0	1/1:1,0:19:9.92:101,10,0	1/1:3,0:13:23.43:106,23,0	0/0:4,0:23:46.64:0,47,202	0/0:0,0:8:21.96:0,22,95
chr10	96607422	.	CG	C	12182.99	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=5.624;DP=581;FS=3.263;HRun=2;HaplotypeScore=128.6004;InbreedingCoeff=0.9978;MQ=86.05;MQ0=0;MQRankSum=-2.177;QD=33.20;ReadPosRankSum=4.371;VQSLOD=4.4206;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:39:99:1437,111,0	1/1:0,7:7:21.07:272,21,0	0/0:24,0:24:66.17:0,66,906	0/0:16,0:15:39.04:0,39,503	1/1:0,28:28:78.25:1005,78,0	1/1:0,15:15:42.14:545,42,0	1/1:0,25:25:59.78:778,60,0	0/0:15,0:15:45.15:0,45,657	1/1:0,24:24:60.20:779,60,0	1/1:0,21:21:60.19:770,60,0	1/1:1,20:21:54.17:678,54,0	1/1:0,19:19:48.16:623,48,0	1/1:2,11:13:21.07:272,21,0	1/1:1,19:19:54.18:701,54,0	1/1:0,22:22:60.20:779,60,0	1/1:0,15:15:36.12:467,36,0	0/0:22,0:22:66.22:0,66,983	0/0:22,0:22:66.22:0,66,980	0/0:25,0:25:69.19:0,69,971	0/0:23,0:23:66.22:0,66,982	0/0:38,0:38:99:0,111,1624	1/1:1,21:22:48.15:619,48,0	1/1:2,12:14:24.06:311,24,0	1/1:0,20:20:57.18:740,57,0	1/1:3,18:21:51.17:661,51,0	1/1:0,21:21:60.16:746,60,0	0/0:21,0:21:60.20:0,60,891	0/0:8,0:8:21.07:0,21,314
chr10	96607546	.	T	TA	8628.54	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=12.003;DP=574;FS=4.886;HRun=9;HaplotypeScore=83.5387;InbreedingCoeff=0.8443;MQ=72.65;MQ0=0;MQRankSum=-0.196;QD=20.40;ReadPosRankSum=6.647;VQSLOD=4.8984;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,39:46:93.21:1029,93,0	1/1:1,7:8:15.04:166,15,0	0/0:11,0:9:4.90:0,5,36	0/1:22,0:18:31.21:31,0,56	1/1:3,13:16:33.09:365,33,0	1/1:3,17:20:42.11:465,42,0	1/1:5,16:21:39.11:431,39,0	0/0:29,0:29:62.85:0,63,529	1/1:5,14:19:33.09:365,33,0	1/1:4,14:18:19.06:429,19,0	1/1:4,16:20:48.09:516,48,0	1/1:4,12:16:36.10:396,36,0	1/1:1,10:11:21.06:232,21,0	1/1:0,19:19:39.11:432,39,0	1/1:5,14:19:36.10:399,36,0	1/1:1,15:16:36.10:399,36,0	1/1:25,0:25:10:174,10,0	1/1:31,1:32:2.98:242,3,0	0/0:32,0:32:65.85:0,66,551	0/0:24,0:24:53.90:0,54,452	0/0:21,0:21:41.96:0,42,359	1/1:2,7:9:23.94:234,24,0	1/1:2,12:14:36.10:398,36,0	1/1:1,19:20:51.14:565,51,0	1/1:3,24:27:60.16:664,60,0	1/1:3,22:25:66.10:697,66,0	0/0:21,0:21:50.85:0,51,425	0/0:13,0:13:35.99:0,36,312
chr10	96607905	.	TGAGAGAGAGAGAGAGAGAGAGAGAGA	T	2348.09	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=7.541;DP=528;FS=46.878;HRun=0;HaplotypeScore=294.6468;InbreedingCoeff=0.8524;MQ=73.82;MQ0=10;MQRankSum=-0.872;QD=33.54;ReadPosRankSum=0.056;VQSLOD=1.4390;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:33.11:0,33,2795	1/1:2,3:5:6.02:392,6,0	./.	0/0:34,0:17:5.30:0,5,60	1/1:10,4:14:6.02:70,6,0	0/0:13,0:12:18.06:0,18,1016	0/0:16,0:19:17.42:0,17,1121	0/0:29,0:29:42.14:0,42,1848	0/0:21,0:19:27.09:0,27,2208	0/0:19,0:18:24.08:0,24,1532	0/0:19,0:18:21.06:0,21,728	0/0:5,0:5:6.02:0,6,480	0/0:16,0:15:21.07:0,21,1601	0/0:15,0:15:21.07:0,21,1061	1/1:9,7:16:9.03:606,9,0	0/0:21,0:21:45.15:0,45,3510	0/0:26,0:30:33.11:0,33,2832	0/0:22,0:22:30.10:0,30,2640	0/0:18,0:18:27.09:0,27,1658	0/0:25,0:25:39.12:0,39,2293	0/0:13,0:13:21.07:0,21,1695	0/0:14,0:14:15.05:0,15,829	0/0:18,0:18:33.10:0,33,1580	0/0:18,0:21:24.08:0,24,2233	1/1:12,6:18:15.05:881,15,0	1/1:7,10:17:20.72:555,21,0	0/0:11,0:11:9.03:0,9,836	0/0:11,0:11:18.05:0,18,923
chr10	96609772	.	TCCTTCCTTCCTC	T	332.35	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.595;DP=395;FS=3.232;HRun=0;HaplotypeScore=165.6534;InbreedingCoeff=0.8083;MQ=59.24;MQ0=13;MQRankSum=-2.735;QD=16.62;ReadPosRankSum=-1.135;VQSLOD=2.7621;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:39.42:0,39,1588	0/0:7,0:7:20.09:0,20,687	0/0:11,0:5:8.69:0,9,87	0/0:15,0:10:20.72:0,21,386	0/0:11,0:11:30.10:0,30,1244	0/0:12,0:12:33.10:0,33,1316	0/0:13,0:13:36.58:0,37,1462	0/0:26,0:23:63.19:0,63,1304	0/0:14,0:14:35.58:0,36,1412	0/0:14,0:14:42.14:0,42,1672	0/0:4,0:3:9.03:0,9,178	0/0:14,0:14:42.14:0,42,1691	0/0:7,0:7:14.53:0,15,717	0/0:14,0:14:39.13:0,39,1591	0/0:15,0:14:32:0,32,1400	0/0:17,0:16:42.13:0,42,1629	1/1:1,12:13:3.01:113,3,0	1/1:6,1:7:15.03:324,15,0	0/0:19,0:17:45.13:0,45,859	0/0:14,0:14:36.12:0,36,843	0/0:21,0:20:47.42:0,47,973	0/0:13,0:13:33.10:0,33,1227	0/0:19,0:18:51.16:0,51,1954	0/0:19,0:19:51.17:0,51,2121	0/0:21,0:21:57.16:0,57,1865	0/0:13,0:13:39.13:0,39,1455	0/0:16,0:16:40.30:0,40,900	0/0:4,0:4:12.03:0,12,306
chr10	96609780	.	TCCTCCCTCCCTCCCTCCCTG	T	1665.95	PASS	AB=0.916;AC=13;AF=0.232;AN=56;BaseQRankSum=-4.491;DP=373;FS=1.087;HRun=0;HaplotypeScore=205.7394;InbreedingCoeff=-0.2253;MQ=55.10;MQ0=14;MQRankSum=0.958;QD=9.52;ReadPosRankSum=-7.141;VQSLOD=0.4643;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:28.38:0,28,1549	0/1:7,0:7:4.90:5,0,1001	0/1:10,0:2:0:0,0,0	0/0:15,0:7:11.14:0,11,117	0/0:13,0:13:30.98:0,31,1340	0/1:12,0:12:8.61:9,0,569	0/0:14,0:13:36.98:0,37,1280	0/1:10,12:19:76.09:509,0,76	0/0:12,0:12:36.10:0,36,1762	0/0:13,0:13:24.45:0,24,1488	0/1:7,0:6:14.91:15,0,149	0/0:14,0:14:7.93:0,8,1050	0/0:7,0:7:18.53:0,19,878	0/0:14,0:14:24.22:0,24,848	0/0:13,0:12:6.19:0,6,1460	0/1:14,0:13:2.54:3,0,760	0/0:12,0:12:3.01:0,3,51	0/0:5,0:5:12:0,12,258	0/1:9,10:16:99:266,0,458	0/1:5,10:15:99:357,0,436	0/1:21,0:20:99:197,0,1052	0/0:11,0:11:10.84:0,11,1033	0/1:17,0:16:2.21:2,0,1545	0/0:19,0:19:11.48:0,11,1956	0/0:14,0:14:32.36:0,32,1404	0/1:12,0:12:8.98:9,0,1131	0/1:15,0:15:99:284,0,701	0/1:4,0:4:99:147,0,151
chr10	96609841	.	CGTGT	C	160.89	PASS	AB=0.811;AC=9;AF=0.180;AN=50;BaseQRankSum=-2.643;DP=288;FS=20.291;HRun=0;HaplotypeScore=67.1312;InbreedingCoeff=-0.0679;MQ=52.94;MQ0=15;MQRankSum=0.512;QD=1.49;ReadPosRankSum=0.831;VQSLOD=-0.3283;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,3:22:3.01:47,3,0	0/0:3,0:3:2.50:0,2,9	./.	./.	0/0:10,0:10:9.02:0,9,164	0/1:4,3:7:7.45:41,0,7	0/1:12,5:18:26.35:36,0,26	0/0:9,0:8:3.01:0,3,46	0/1:9,3:14:26.84:36,0,27	0/0:10,0:10:3.01:0,3,38	0/1:12,2:13:35.12:35,0,61	0/0:3,0:3:2.68:0,3,11	0/0:3,0:4:2.74:0,3,12	0/1:5,1:6:6.48:41,0,6	0/0:10,0:10:12.04:0,12,235	0/0:1,0:2:2.74:0,3,12	0/0:19,0:18:36.66:0,37,520	0/0:8,0:7:6.02:0,6,112	0/0:4,0:4:9.03:0,9,153	0/0:5,0:6:9.03:0,9,170	0/0:17,0:23:8.99:0,9,125	0/1:7,0:7:6.74:14,0,7	./.	0/1:13,1:18:36.18:36,0,87	0/0:12,0:12:9.03:0,9,187	0/0:9,0:12:18.02:0,18,255	0/0:6,0:6:3.01:0,3,55	0/0:3,0:1:3.01:0,3,68
chr10	96609878	.	G	GTGTA	1078.26	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=1.290;DP=382;FS=5.581;HRun=0;HaplotypeScore=69.6630;InbreedingCoeff=0.4608;MQ=63.53;MQ0=24;MQRankSum=-0.152;QD=16.34;ReadPosRankSum=2.918;VQSLOD=2.5333;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:32.92:0,33,271	0/0:4,0:4:11.96:0,12,104	0/0:30,0:14:34.77:0,35,322	0/0:39,0:7:17.99:0,18,163	0/0:8,0:7:11.97:0,12,126	0/0:13,0:13:29.94:0,30,251	0/0:24,0:24:47.89:0,48,409	0/0:11,0:11:28.74:0,29,232	0/0:10,0:10:21.01:0,21,207	0/0:11,0:11:29.98:0,30,264	0/0:17,0:17:32.82:0,33,274	0/0:7,0:7:17.95:0,18,142	0/0:4,0:4:11.98:0,12,106	0/0:9,0:9:23.97:0,24,213	0/1:11,0:11:52.77:75,0,53	0/0:8,0:8:20.96:0,21,183	1/1:19,5:24:46.07:796,46,0	1/1:12,1:11:26.86:279,27,0	0/1:10,0:9:45.57:46,0,140	0/1:8,0:8:25.05:25,0,81	0/0:24,0:23:21.83:0,22,157	0/0:12,0:12:29.53:0,30,224	0/0:9,0:9:20.96:0,21,170	0/0:23,0:22:50.86:0,51,478	0/0:8,0:8:14.85:0,15,146	0/0:11,0:11:24.80:0,25,177	0/0:9,0:9:17.95:0,18,143	0/0:3,0:2:5.99:0,6,48
chr10	96609974	.	ACC	A	1385.01	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.991;DP=490;FS=2.342;HRun=3;HaplotypeScore=58.6875;InbreedingCoeff=0.9843;MQ=93.73;MQ0=2;MQRankSum=-3.669;QD=28.27;ReadPosRankSum=2.442;VQSLOD=2.8894;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.22:0,75,1377	0/0:7,0:7:21.06:0,21,375	0/0:27,0:25:48.55:0,49,1047	0/0:24,0:23:67.37:0,67,1049	0/0:28,0:28:84.28:0,84,1579	0/0:14,0:14:42.12:0,42,739	0/0:22,0:22:66.21:0,66,1234	0/0:30,0:30:87.30:0,87,1658	0/0:13,0:13:39.13:0,39,736	0/0:24,0:24:72.24:0,72,1321	0/0:19,0:19:57.20:0,57,1085	0/0:19,0:19:57.20:0,57,1100	0/0:13,0:13:39.12:0,39,709	0/0:10,0:10:30.05:0,30,501	0/0:15,0:15:36.12:0,36,687	0/0:12,0:12:36.12:0,36,695	1/1:2,28:30:17.95:830,18,0	1/1:0,19:19:45.15:675,45,0	0/0:14,0:14:39.13:0,39,738	0/0:23,0:23:69.23:0,69,1290	0/0:15,0:15:44.99:0,45,720	0/0:9,0:9:27.09:0,27,522	0/0:13,0:13:36.12:0,36,695	0/0:18,0:18:54.19:0,54,1031	0/0:12,0:12:36.12:0,36,695	0/0:17,0:17:51.17:0,51,940	0/0:12,0:12:33.11:0,33,609	0/0:5,0:5:15.05:0,15,289
chr10	96611419	.	CTG	C	2251.35	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.385;DP=664;FS=8.546;HRun=0;HaplotypeScore=80.2904;InbreedingCoeff=0.9917;MQ=84.79;MQ0=1;MQRankSum=-2.343;QD=42.48;ReadPosRankSum=2.185;VQSLOD=5.0588;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,2632	0/0:11,0:11:33.11:0,33,644	0/0:28,0:27:78.26:0,78,1504	0/0:24,0:24:66.22:0,66,1290	0/0:19,0:19:57.18:0,57,1105	0/0:24,0:24:69.24:0,69,1402	0/0:37,0:37:99:0,111,2255	0/0:24,0:24:69.24:0,69,1389	0/0:25,0:25:75.24:0,75,1488	0/0:26,0:26:75.26:0,75,1521	0/0:12,0:12:36.12:0,36,731	0/0:21,0:21:63.22:0,63,1261	0/0:13,0:13:39.13:0,39,779	0/0:23,0:23:69.22:0,69,1351	0/0:24,0:24:72.25:0,72,1452	0/0:26,0:26:78.26:0,78,1515	1/1:0,34:34:96.33:1565,96,0	1/1:0,19:19:51.17:808,51,0	0/0:23,0:23:66.22:0,66,1306	0/0:26,0:26:72.21:0,72,1356	0/0:34,0:34:99:0,99,1927	0/0:20,0:20:60.19:0,60,1174	0/0:20,0:20:60.21:0,60,1208	0/0:40,0:40:99:0,114,2259	0/0:17,0:17:51.18:0,51,1036	0/0:20,0:20:60.21:0,60,1220	0/0:24,0:24:72.25:0,72,1437	0/0:5,0:5:15.05:0,15,305
chr10	96613226	.	C	CTG	2435.02	PASS	AB=0.809;AC=20;AF=0.370;AN=54;BaseQRankSum=-6.740;DP=633;FS=4.441;HRun=0;HaplotypeScore=109.9437;InbreedingCoeff=0.2421;MQ=64.43;MQ0=17;MQRankSum=5.071;QD=7.45;ReadPosRankSum=-0.652;VQSLOD=3.2022;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,9:48:53.85:97,0,54	0/1:5,0:10:0.02:0,0,31	0/0:33,0:15:0:0,0,0	./.	0/0:10,0:22:6.27:0,6,33	1/1:14,5:19:12.04:169,12,0	1/1:19,8:27:15.05:223,15,0	0/0:27,0:27:0.89:0,1,2	0/1:19,8:27:14.45:204,0,14	1/1:14,11:24:24.08:351,24,0	0/1:14,0:14:45.20:51,0,45	0/1:9,10:19:31.10:285,0,31	0/1:6,6:12:23.49:80,0,23	1/1:14,10:24:18.01:267,18,0	0/0:11,0:23:22.71:0,23,112	1/1:11,8:21:20.81:274,21,0	0/0:26,0:28:14.83:0,15,125	0/1:21,2:23:20.28:20,0,195	0/0:12,0:14:3.75:0,4,17	0/0:4,0:11:2.84:0,3,14	0/0:29,0:30:2.84:0,3,14	1/1:10,7:18:3.01:45,3,0	0/0:16,0:16:6:0,6,57	0/1:19,17:39:1.53:534,0,2	0/0:12,0:23:8.52:0,9,42	0/0:17,0:26:8.52:0,9,42	0/0:18,0:23:14.20:0,14,70	0/0:3,0:5:5.68:0,6,28
chr10	96614010	.	TC	T	798.24	PASS	AB=0.967;AC=6;AF=0.107;AN=56;BaseQRankSum=6.844;DP=395;FS=4.185;HRun=7;HaplotypeScore=39.0534;InbreedingCoeff=0.6859;MQ=81.55;MQ0=0;MQRankSum=-0.951;QD=12.47;ReadPosRankSum=2.070;VQSLOD=1.8167;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:66.15:673,66,0	0/0:10,0:10:30.08:0,30,361	0/1:14,0:14:0.10:0,0,260	0/1:13,1:14:4.71:5,0,196	0/0:11,0:11:33.11:0,33,415	0/0:17,0:17:48.14:0,48,588	0/0:24,0:24:60.19:0,60,750	0/0:25,0:25:53.87:0,54,609	0/0:13,0:13:33.09:0,33,402	0/0:8,0:8:24.08:0,24,302	0/0:2,0:2:6.02:0,6,75	0/0:20,0:20:51.14:0,51,618	0/0:14,0:14:42.13:0,42,528	0/0:12,0:12:36.10:0,36,439	0/0:16,0:16:42.13:0,42,528	1/1:2,7:9:24.05:244,24,0	0/0:16,0:16:39.12:0,39,489	0/0:11,0:11:33.11:0,33,415	0/0:15,0:15:36.09:0,36,438	0/0:15,0:15:45.14:0,45,566	0/0:27,0:27:78.24:0,78,968	0/0:8,0:8:24.08:0,24,302	0/0:5,0:5:15.05:0,15,189	0/0:24,0:24:63.20:0,63,786	0/0:4,0:4:12.04:0,12,151	0/0:10,0:10:27.09:0,27,339	0/0:18,0:16:54.17:0,54,678	0/0:6,0:6:18.06:0,18,226
chr10	96614145	.	A	AG	204.08	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.585;DP=206;FS=2.955;HRun=6;HaplotypeScore=22.9877;InbreedingCoeff=0.6496;MQ=88.64;MQ0=1;MQRankSum=-0.940;QD=22.68;ReadPosRankSum=-0.506;VQSLOD=1.7940;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:33.08:0,33,354	0/0:2,0:2:3:0,3,31	0/0:13,0:9:4.34:0,4,86	0/0:16,0:16:23.01:0,23,243	0/0:5,0:5:15.02:0,15,153	0/0:6,0:6:12.03:0,12,129	0/0:14,0:14:30.07:0,30,322	0/0:5,0:5:12.03:0,12,128	0/0:6,0:6:18.03:0,18,185	0/0:4,0:4:9.02:0,9,94	0/0:7,0:7:15.04:0,15,161	0/0:9,0:9:27.07:0,27,290	0/0:6,0:6:18.05:0,18,193	0/0:5,0:5:15.02:0,15,152	0/0:9,0:9:27.07:0,27,290	0/0:7,0:7:15.04:0,15,161	1/1:1,5:6:15.05:197,15,0	1/1:0,3:3:9.03:117,9,0	0/0:6,0:6:8.99:0,9,85	0/0:7,0:7:15.04:0,15,161	0/0:10,0:10:27.07:0,27,289	0/0:10,0:10:30.08:0,30,322	0/0:5,0:5:12.02:0,12,121	0/0:7,0:7:18.05:0,18,193	0/0:8,0:8:21.05:0,21,225	0/0:7,0:7:21.04:0,21,219	0/0:8,0:8:18.04:0,18,193	0/0:1,0:1:3.01:0,3,32
chr10	96614224	.	T	TC	1314.79	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.421;DP=346;FS=3.836;HRun=0;HaplotypeScore=38.9324;InbreedingCoeff=0.9662;MQ=81.24;MQ0=0;MQRankSum=-3.395;QD=35.53;ReadPosRankSum=0.722;VQSLOD=3.0292;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.21:0,63,879	0/0:5,0:5:15.05:0,15,210	0/0:17,0:17:45.15:0,45,619	0/0:13,0:12:33.08:0,33,414	0/0:13,0:13:36.12:0,36,503	0/0:11,0:11:33.11:0,33,461	0/0:13,0:13:36.10:0,36,485	0/0:19,0:19:51.12:0,51,664	0/0:4,0:4:12.04:0,12,168	0/0:15,0:15:42.14:0,42,588	0/0:13,0:13:39.13:0,39,540	0/0:6,0:6:18.06:0,18,252	0/0:8,0:8:24.08:0,24,336	0/0:9,0:9:27.09:0,27,377	0/0:14,0:14:42.14:0,42,587	0/0:11,0:11:30.10:0,30,419	1/1:0,21:21:54.18:861,54,0	1/1:0,16:16:36.12:575,36,0	0/0:8,0:8:24.08:0,24,336	0/0:12,0:12:36.12:0,36,503	0/0:25,0:25:75.25:0,75,1049	0/0:9,0:9:27.09:0,27,377	0/0:8,0:8:24.08:0,24,335	0/0:11,0:11:33.11:0,33,461	0/0:10,0:10:30.10:0,30,420	0/0:13,0:13:39.12:0,39,531	0/0:11,0:10:33.11:0,33,461	0/0:10,0:10:24.08:0,24,335
chr10	96614834	.	GT	G	1431.26	PASS	AB=0.733;AC=24;AF=0.429;AN=56;BaseQRankSum=-3.871;DP=577;FS=5.019;HRun=16;HaplotypeScore=83.6923;InbreedingCoeff=0.6231;MQ=68.75;MQ0=1;MQRankSum=0.552;QD=5.08;ReadPosRankSum=3.476;VQSLOD=2.5105;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:25,10:35:31.29:54,0,31	1/1:0,7:7:17.65:108,18,0	0/0:21,0:15:7.06:0,7,28	0/1:13,0:14:22.51:34,0,23	1/1:11,17:28:11.60:187,12,0	0/0:6,0:18:20.31:0,20,126	0/0:16,1:22:47.14:0,47,330	1/1:21,5:28:11.22:71,11,0	0/0:9,0:22:20.27:0,20,125	0/0:16,0:30:44.55:0,45,271	0/0:13,0:24:49.83:0,50,310	0/0:6,0:12:21.69:0,22,136	0/0:13,0:20:23.16:0,23,146	0/0:4,0:13:8.64:0,9,47	1/1:5,9:14:1.01:103,1,0	0/1:3,10:13:26.74:84,0,27	0/0:9,0:27:37.52:0,38,188	0/0:8,0:20:35.23:0,35,184	1/1:10,15:26:17.86:214,18,0	1/1:15,5:25:5.42:111,5,0	0/1:6,7:13:5.20:72,0,5	0/0:8,0:24:39.77:0,40,231	0/0:14,0:24:28.38:0,28,184	0/0:13,0:18:26.01:0,26,156	1/1:5,10:15:7.58:125,8,0	1/1:11,10:24:27.23:155,27,0	1/1:11,15:27:42.99:257,43,0	1/1:4,7:12:10.70:60,11,0
chr10	96615060	.	T	TG	10292.95	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.023;DP=600;FS=2.470;HRun=2;HaplotypeScore=333.3264;InbreedingCoeff=0.9028;MQ=36.86;MQ0=0;MQRankSum=-1.396;QD=17.42;ReadPosRankSum=3.377;VQSLOD=4.0096;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:29:67.72:431,68,0	1/1:2,7:9:26.76:214,27,0	0/0:5,0:5:9.60:0,10,45	0/0:4,0:4:5.70:0,6,23	1/1:10,17:27:60.76:425,61,0	1/1:9,21:30:83.34:573,83,0	1/1:7,15:22:51.32:401,51,0	1/1:12,20:32:65.49:561,65,0	1/1:6,14:20:55.09:405,55,0	1/1:14,24:38:79.03:804,79,0	1/1:8,15:23:50.82:299,51,0	1/1:5,22:27:76.71:547,77,0	1/1:6,16:22:56.21:385,56,0	1/1:4,18:22:48:295,48,0	1/1:7,27:34:96.33:655,96,0	1/1:1,21:22:61.07:427,61,0	1/1:4,7:11:19.40:139,19,0	1/1:7,7:14:33.95:237,34,0	1/1:4,10:14:35.93:330,36,0	1/1:5,23:28:78.30:476,78,0	1/1:5,8:13:21.04:128,21,0	1/1:7,16:23:52.51:369,53,0	1/1:7,25:32:71.26:402,71,0	1/1:5,10:15:32.68:214,33,0	1/1:4,18:22:61.72:390,62,0	1/1:5,15:20:49.89:479,50,0	1/1:8,23:31:59.92:550,60,0	1/1:3,8:10:23.63:158,24,0
chr10	96615493	.	CTGTA	C	8516.62	PASS	AB=0.986;AC=32;AF=0.593;AN=54;BaseQRankSum=-5.059;DP=677;FS=2.645;HRun=0;HaplotypeScore=134.3793;InbreedingCoeff=0.8502;MQ=63.35;MQ0=4;MQRankSum=0.528;QD=18.97;ReadPosRankSum=3.359;VQSLOD=4.8907;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,16:34:45.62:701,46,0	0/0:5,0:11:14.03:0,14,183	./.	0/0:16,0:14:2.97:0,3,20	0/0:17,0:28:36.11:0,36,613	1/1:10,14:24:42.14:654,42,0	1/1:14,11:25:27.09:420,27,0	0/1:43,0:43:0.86:1,0,475	1/1:11,22:33:57.19:888,57,0	1/1:18,17:35:51.16:767,51,0	1/1:8,13:21:30.10:467,30,0	1/1:9,17:26:45.15:701,45,0	1/1:8,14:22:42.14:654,42,0	1/1:9,14:23:33.11:514,33,0	0/0:9,0:26:54.18:0,54,957	1/1:9,11:20:27.09:420,27,0	1/1:11,13:24:30.10:467,30,0	1/1:7,8:15:15.61:319,16,0	0/0:13,0:19:21.07:0,21,362	0/0:11,0:21:24.07:0,24,388	0/0:12,0:23:33.08:0,33,557	1/1:13,15:28:45.15:701,45,0	1/1:9,8:17:20.94:327,21,0	1/1:10,14:23:33.11:514,33,0	0/0:16,0:25:12.03:0,12,181	0/1:34,1:35:1.56:2,0,883	0/0:16,0:33:48.16:0,48,851	0/0:9,0:8:3.01:0,3,52
chr10	96618233	.	G	GA	3842.63	PASS	AB=0.857;AC=51;AF=0.911;AN=56;BaseQRankSum=0.009;DP=478;FS=20.181;HRun=12;HaplotypeScore=69.8117;InbreedingCoeff=0.3542;MQ=53.47;MQ0=9;MQRankSum=-1.192;QD=8.16;ReadPosRankSum=1.918;VQSLOD=0.7937;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,41:57:55.27:803,55,0	0/1:4,1:5:20.25:20,0,35	0/0:7,0:4:9.82:0,10,54	0/1:7,0:5:0.41:0,0,40	0/1:11,5:17:9.11:207,0,9	1/1:5,1:14:17.04:85,17,0	1/1:9,2:21:40.51:230,41,0	1/1:8,0:13:19.14:88,19,0	1/1:6,2:14:22.94:145,23,0	1/1:10,0:19:19.30:104,19,0	1/1:8,1:19:29.42:161,29,0	1/1:2,0:8:5.90:38,6,0	1/1:7,0:12:22.02:106,22,0	1/1:3,8:10:12.91:118,13,0	1/1:4,11:14:14.76:136,15,0	1/1:5,9:14:5.08:201,5,0	1/1:16,1:30:14.87:88,15,0	1/1:2,0:18:19.89:100,20,0	1/1:4,0:15:22.01:112,22,0	1/1:7,0:22:22.84:120,23,0	1/1:0,0:15:14.27:73,14,0	1/1:3,0:12:23.22:118,23,0	1/1:1,1:15:23.32:119,23,0	1/1:8,1:30:15.12:133,15,0	1/1:3,9:12:17.90:161,18,0	1/1:8,16:24:8.49:304,8,0	1/1:3,1:16:11.27:56,11,0	1/1:6,0:5:2.84:14,3,0
chr10	96618833	.	A	AC	1287.12	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=2.134;DP=656;FS=4.979;HRun=7;HaplotypeScore=75.5019;InbreedingCoeff=0.7939;MQ=79.33;MQ0=1;MQRankSum=-1.699;QD=11.10;ReadPosRankSum=0.913;VQSLOD=2.1632;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,37:46:63.19:761,63,0	0/0:5,0:5:15.02:0,15,145	0/0:26,0:21:20.41:0,20,216	0/0:25,0:25:22.46:0,22,338	0/0:24,1:25:26.05:0,26,494	0/0:20,0:20:54.04:0,54,503	0/0:29,0:29:75.05:0,75,695	0/0:25,0:25:42.01:0,42,389	0/0:21,0:21:50.56:0,51,471	0/0:20,0:20:57.04:0,57,531	0/0:18,0:18:42.05:0,42,399	0/0:21,0:21:33.76:0,34,511	0/0:23,0:23:63.05:0,63,593	0/0:17,0:17:45.06:0,45,431	0/0:22,0:22:50.40:0,50,459	1/1:3,16:19:7.24:369,7,0	1/1:26,0:26:31.55:178,32,0	1/1:21,0:21:3.17:117,3,0	0/0:18,0:18:32.95:0,33,288	0/0:23,0:23:54.02:0,54,496	0/0:28,0:28:69.44:0,69,627	0/0:25,0:25:65.86:0,66,609	0/0:22,0:22:26.42:0,26,415	0/0:40,0:40:93.12:0,93,889	0/0:26,0:26:63.05:0,63,593	0/0:29,0:28:68.98:0,69,635	0/0:32,0:32:90.09:0,90,848	0/1:4,0:4:13.07:13,0,46
chr10	96618840	.	C	CT	1433.94	PASS	AB=0.986;AC=7;AF=0.125;AN=56;BaseQRankSum=0.029;DP=644;FS=9.784;HRun=7;HaplotypeScore=76.7632;InbreedingCoeff=0.5119;MQ=75.73;MQ0=1;MQRankSum=-1.636;QD=10.17;ReadPosRankSum=1.211;VQSLOD=1.0868;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:47,0:47:45.96:153,0,46	0/0:8,0:8:20.98:0,21,189	0/1:21,1:17:5.16:5,0,234	0/0:23,0:23:33.06:0,33,326	0/0:25,0:25:21.86:0,22,452	0/0:21,0:21:51.06:0,51,487	0/0:27,0:27:63.06:0,63,594	0/0:22,0:22:39.02:0,39,362	0/0:18,0:18:54.06:0,54,512	0/0:21,0:21:47.95:0,48,440	0/0:20,0:20:47.80:0,48,426	0/0:22,0:22:51.23:0,51,504	0/0:24,0:24:65.98:0,66,608	0/0:19,0:19:51.02:0,51,478	0/0:22,0:22:57.02:0,57,522	0/1:22,0:22:85.61:86,0,98	1/1:1,26:27:60.18:718,60,0	1/1:3,20:23:51.16:611,51,0	0/0:15,0:15:29.78:0,30,255	0/0:21,0:21:46.91:0,47,417	0/0:24,0:24:57.05:0,57,541	0/0:26,0:26:68.80:0,69,632	0/0:21,0:21:33.19:0,33,382	0/0:32,0:32:90.14:0,90,867	0/0:25,0:25:57.86:0,58,561	0/0:29,0:28:71.62:0,72,642	0/0:34,0:34:89.42:0,89,820	0/0:4,0:4:6.01:0,6,58
chr10	96619270	.	C	CA	932.49	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.861;DP=544;FS=23.107;HRun=1;HaplotypeScore=102.9515;InbreedingCoeff=0.9458;MQ=72.78;MQ0=9;MQRankSum=-3.861;QD=28.26;ReadPosRankSum=2.135;VQSLOD=2.1870;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:87.27:0,87,1127	0/0:12,0:12:23.96:0,24,257	0/0:41,0:20:59.84:0,60,699	0/0:40,0:24:69.14:0,69,835	0/0:16,0:16:27.09:0,27,350	0/0:18,0:18:36.12:0,36,467	0/0:28,0:28:54.13:0,54,681	0/0:19,0:19:57.17:0,57,715	0/0:18,0:18:45.09:0,45,538	0/0:18,0:17:41.72:0,42,479	0/0:11,0:11:27.09:0,27,350	0/0:16,0:14:24.55:0,25,312	0/0:7,0:7:15.05:0,15,187	0/0:11,0:11:24.03:0,24,282	0/0:20,0:20:45.15:0,45,583	0/0:9,0:9:20.98:0,21,235	1/1:2,20:21:54.13:764,54,0	1/1:2,9:9:18.14:288,18,0	0/0:17,0:16:48.14:0,48,603	0/0:13,0:13:21.07:0,21,265	0/0:40,0:40:99:0,102,1258	0/0:17,0:17:45.15:0,45,583	0/0:9,0:9:21.07:0,21,273	0/0:25,0:25:41.65:0,42,543	0/0:16,0:15:36.12:0,36,461	0/0:16,0:16:37.63:0,38,448	0/0:22,0:22:18.75:0,19,178	0/0:15,0:15:9.02:0,9,100
chr10	96619271	.	ATG	A	138.26	PASS	AB=0.974;AC=14;AF=0.250;AN=56;BaseQRankSum=3.589;DP=555;FS=0.000;HRun=0;HaplotypeScore=111.5658;InbreedingCoeff=0.0967;MQ=72.29;MQ0=11;MQRankSum=-3.080;QD=0.82;ReadPosRankSum=-0.193;VQSLOD=1.5090;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:65.85:0,66,890	0/1:11,1:12:13.07:13,0,103	0/0:41,0:20:12:0,12,157	0/0:39,0:24:19.33:0,19,223	0/0:16,0:16:9.03:0,9,117	0/0:18,0:18:22.84:0,23,274	0/0:28,0:28:0.44:0,0,439	0/0:19,0:19:0.35:0,0,23	0/1:20,0:19:49.85:50,0,222	0/1:19,1:18:45.47:45,0,186	0/0:11,0:11:12.04:0,12,161	0/0:16,0:14:23.52:0,24,253	0/1:7,0:7:12.26:12,0,59	0/0:10,1:11:20.53:0,21,264	0/0:21,0:21:34.53:0,35,378	0/1:10,0:10:56.60:57,0,125	1/1:20,0:21:4.63:26,5,0	0/1:10,0:9:4.85:5,0,10	0/0:17,0:16:1.36:0,1,3	1/1:12,0:12:2.80:13,3,0	0/0:40,0:40:9.07:0,9,39	0/0:16,1:17:35.93:0,36,453	0/0:10,0:10:21.07:0,21,296	0/0:26,0:26:29.73:0,30,370	0/0:18,0:17:22.73:0,23,339	0/1:16,0:16:15.33:15,0,189	0/1:24,0:24:14.84:15,0,29	1/1:15,0:15:8.22:36,8,0
chr10	96619284	.	TGTGTGTGC	T	2939.68	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=8.483;DP=564;FS=0.930;HRun=0;HaplotypeScore=151.9869;InbreedingCoeff=0.1796;MQ=56.01;MQ0=12;MQRankSum=-4.145;QD=7.95;ReadPosRankSum=-1.668;VQSLOD=2.3531;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:68.64:0,69,1100	0/1:14,0:14:18.92:259,0,19	0/1:32,0:11:1.64:2,0,24	0/1:27,0:11:28.14:28,0,68	0/0:19,0:19:8.68:0,9,61	0/0:18,0:18:15.37:0,15,172	0/0:27,0:27:24.06:0,24,343	1/1:17,0:17:29.84:232,30,0	0/1:18,0:17:3.46:3,0,108	0/1:24,0:22:54.91:159,0,55	0/0:12,0:12:11.92:0,12,109	0/0:21,0:19:6.57:0,7,82	0/1:11,0:11:33.74:51,0,34	0/0:11,0:11:9.98:0,10,122	0/1:20,0:20:99:211,0,154	0/0:13,0:13:23.80:0,24,309	1/1:21,0:20:53.62:455,54,0	0/1:10,0:8:12.11:109,0,12	1/1:15,0:14:12.44:195,12,0	1/1:2,6:8:3.48:83,3,0	1/1:51,0:50:83.34:806,83,0	0/0:21,0:21:31.14:0,31,269	0/0:11,0:11:20.48:0,20,141	0/1:28,0:28:4.10:4,0,131	0/1:17,0:16:63.97:64,0,134	0/1:17,0:17:36.19:282,0,36	1/1:24,0:24:5.87:90,6,0	1/1:16,0:16:5.29:88,5,0
chr10	96619286	.	TGTGTGC	T	3233.06	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=8.561;DP=563;FS=1.987;HRun=0;HaplotypeScore=136.8805;InbreedingCoeff=-0.0541;MQ=55.91;MQ0=13;MQRankSum=-2.059;QD=7.52;ReadPosRankSum=-1.072;VQSLOD=2.3237;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:68.60:0,69,903	0/1:14,0:14:18.96:135,0,19	0/1:29,0:9:1.64:2,0,24	0/1:26,0:10:28.14:28,0,68	0/0:19,0:19:8.63:0,9,61	0/1:19,0:19:25.49:25,0,154	0/0:27,0:27:23.90:0,24,270	1/1:15,0:15:32.81:253,33,0	0/1:17,0:16:75.43:111,0,75	0/1:24,0:22:20.32:240,0,20	0/0:12,0:12:11.89:0,12,87	0/1:21,0:19:34.82:35,0,75	0/1:11,0:11:33.36:74,0,33	0/1:13,0:13:45.56:46,0,103	0/1:20,0:20:83.77:84,0,155	0/1:12,0:12:2.91:3,0,192	1/1:22,0:21:46.95:418,47,0	0/1:8,0:7:5.90:95,0,6	1/1:16,0:16:8.60:252,9,0	1/1:8,0:8:6.01:75,6,0	1/1:52,0:50:99:907,108,0	0/0:22,0:22:31.11:0,31,236	0/0:12,0:12:20.28:0,20,141	0/1:29,0:29:42.22:42,0,130	0/1:17,0:16:12.39:12,0,146	0/1:17,0:17:39.63:193,0,40	1/1:3,21:24:7.19:242,7,0	1/1:15,1:16:9:139,9,0
chr10	96619288	.	TGTGC	T	2696.10	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=9.373;DP=568;FS=4.692;HRun=0;HaplotypeScore=124.9646;InbreedingCoeff=0.0787;MQ=54.78;MQ0=13;MQRankSum=-2.226;QD=6.83;ReadPosRankSum=-0.513;VQSLOD=2.3904;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:61.92:0,62,713	0/1:14,0:14:19.72:67,0,20	0/1:28,0:8:1.64:2,0,24	0/1:24,0:8:28.14:28,0,68	0/0:19,0:19:8.61:0,9,61	0/0:19,0:19:5.85:0,6,123	0/0:29,0:29:2.83:0,3,221	1/1:15,0:15:33.28:254,33,0	0/1:17,0:16:54.24:54,0,72	0/1:23,0:21:20.48:209,0,20	0/0:14,0:14:11.89:0,12,87	0/1:21,0:19:3.12:3,0,74	0/1:12,0:12:33.42:42,0,33	0/1:13,0:13:13.36:13,0,136	0/1:21,0:21:28.46:28,0,155	0/1:13,0:13:17.79:18,0,147	1/1:22,0:21:46.94:390,47,0	1/1:8,0:7:15.88:102,16,0	1/1:16,0:16:7.39:250,7,0	1/1:8,0:8:6.01:61,6,0	1/1:53,0:51:99:918,113,0	0/0:21,0:21:31.12:0,31,254	0/0:13,0:13:20.43:0,20,141	0/1:30,0:30:10.72:11,0,130	0/0:17,0:16:1.60:0,2,148	0/1:17,0:17:51.01:172,0,51	1/1:24,0:24:7.43:124,7,0	1/1:3,13:16:9.03:128,9,0
chr10	96619290	.	TGC	T	2314.83	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=8.390;DP=554;FS=10.282;HRun=0;HaplotypeScore=111.5829;InbreedingCoeff=0.2789;MQ=54.56;MQ0=13;MQRankSum=-0.169;QD=7.30;ReadPosRankSum=-0.548;VQSLOD=2.6214;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:58.49:0,58,613	0/1:14,0:14:10.09:10,0,31	0/1:24,0:5:1.63:2,0,24	0/1:23,0:8:28.14:28,0,68	0/0:18,0:18:8.63:0,9,61	0/0:18,0:18:13.93:0,14,114	0/0:28,0:28:2.70:0,3,221	1/1:2,11:13:28.48:247,28,0	0/1:18,0:17:0.44:0,0,89	0/1:23,0:21:24.43:200,0,24	0/0:12,0:12:11.89:0,12,87	0/0:19,0:17:9.04:0,9,84	0/1:12,0:12:29.39:29,0,35	0/1:13,0:13:3.42:3,0,112	0/0:22,0:22:19.60:0,20,183	0/1:14,0:14:33.34:33,0,107	1/1:19,3:21:46.61:362,47,0	1/1:9,0:8:7.85:75,8,0	1/1:4,12:16:2.49:244,2,0	1/1:8,0:8:5.98:47,6,0	1/1:52,0:50:99:916,113,0	0/0:15,5:20:31.10:0,31,231	0/0:13,0:13:20.71:0,21,142	0/0:29,0:29:0.28:0,0,133	0/0:17,0:16:14.28:0,14,161	0/1:16,0:16:64.23:157,0,64	1/1:23,1:24:7.76:70,8,0	1/1:16,0:16:8.96:68,9,0
chr10	96619292	.	CGTGTGT	C	1695.22	PASS	AB=0.810;AC=33;AF=0.660;AN=50;BaseQRankSum=0.726;DP=550;FS=1.835;HRun=0;HaplotypeScore=139.1670;InbreedingCoeff=0.0835;MQ=54.76;MQ0=13;MQRankSum=-1.652;QD=4.05;ReadPosRankSum=1.660;VQSLOD=2.7739;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:33.07:0,33,661	1/1:3,0:14:15.05:208,15,0	./.	./.	0/1:4,0:18:0.25:0,0,0	0/1:9,11:20:56.71:57,0,75	0/1:14,13:27:8.93:9,0,19	0/1:13,0:13:0:0,0,0	1/1:8,8:16:9.92:175,10,0	1/1:9,12:19:27.52:365,28,0	./.	1/1:7,12:17:1.50:59,2,0	1/1:5,7:12:4.97:68,5,0	0/1:6,3:13:1.18:116,0,1	1/1:11,0:22:12.04:167,12,0	0/0:14,0:14:20.77:0,21,229	0/1:21,0:21:40.04:44,0,40	0/1:7,0:8:18.24:18,0,43	1/1:16,0:16:1.27:3,1,0	1/1:8,0:8:2.97:37,3,0	0/1:54,0:52:35.37:39,0,35	0/0:18,0:19:1.55:0,2,4	0/1:9,5:14:0:0,0,0	1/1:13,15:28:5.05:68,5,0	1/1:10,0:16:2.06:40,2,0	0/1:7,0:16:1.60:108,0,2	0/1:24,0:24:8.63:160,0,9	1/1:16,0:16:5.71:86,6,0
chr10	96619328	.	T	TGC	343.78	PASS	AB=0.551;AC=3;AF=0.054;AN=56;BaseQRankSum=-0.370;DP=554;FS=7.122;HRun=0;HaplotypeScore=111.4167;InbreedingCoeff=0.6199;MQ=79.46;MQ0=9;MQRankSum=-0.725;QD=5.83;ReadPosRankSum=0.338;VQSLOD=2.7605;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,35:43:8.57:246,0,9	0/0:15,0:15:26.89:0,27,215	0/0:33,0:25:65.15:0,65,635	0/0:38,0:28:70.84:0,71,717	0/0:23,0:22:17.67:0,18,136	0/0:20,0:20:21.35:0,21,163	0/0:28,0:28:41.97:0,42,367	0/0:24,0:23:66.02:0,66,594	0/0:15,0:15:20.97:0,21,173	0/0:21,0:21:51.83:0,52,436	0/0:13,0:13:14.79:0,15,107	0/0:19,0:17:17.96:0,18,145	0/0:9,0:9:11.87:0,12,86	0/0:13,0:13:20.78:0,21,169	0/0:19,0:19:23.96:0,24,196	1/1:16,0:16:20.33:202,20,0	0/0:25,0:24:44.88:0,45,371	0/0:15,0:13:35.90:0,36,294	0/0:11,0:10:23.99:0,24,208	0/0:10,0:10:23.98:0,24,202	0/0:38,0:36:73.04:0,73,583	0/0:13,0:13:14.97:0,15,121	0/0:11,0:11:14.95:0,15,120	0/0:28,0:27:26.85:0,27,212	0/0:12,0:12:11.99:0,12,100	0/0:16,0:16:41.30:0,41,346	0/0:17,0:17:35.51:0,36,257	0/0:9,0:9:12:0,12,114
chr10	96619743	.	ATGTGTGTG	A	613.95	PASS	AB=0.667;AC=3;AF=0.056;AN=54;BaseQRankSum=4.145;DP=503;FS=2.789;HRun=0;HaplotypeScore=139.6326;InbreedingCoeff=0.3708;MQ=58.06;MQ0=8;MQRankSum=-4.564;QD=15.74;ReadPosRankSum=0.547;VQSLOD=3.0557;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:29:45.15:0,45,1663	0/0:1,0:3:3.01:0,3,105	0/0:11,0:4:3:0,3,29	./.	0/0:17,0:21:15:0,15,220	0/0:18,0:19:37.68:0,38,1400	0/0:26,0:26:48.15:0,48,1684	0/0:30,0:29:33.56:0,34,912	0/0:14,0:14:18.06:0,18,682	0/0:20,0:20:42.14:0,42,1604	0/0:16,0:18:36.12:0,36,1080	0/0:10,0:10:18.06:0,18,630	0/0:17,0:17:24.08:0,24,910	0/0:12,0:13:30.08:0,30,974	0/0:7,0:10:3.01:0,3,104	0/0:6,0:10:3.01:0,3,105	1/1:12,9:20:12.04:296,12,0	0/1:9,8:18:57.57:416,0,58	0/0:22,0:21:24.08:0,24,781	0/0:15,0:15:6.02:0,6,154	0/0:27,0:25:11.83:0,12,387	0/0:14,0:15:30.10:0,30,1067	0/0:14,0:13:12.04:0,12,474	0/0:31,0:31:66.23:0,66,2663	0/0:12,0:13:0.47:0,0,1	0/0:21,0:29:55.74:0,56,1848	0/0:14,0:20:12.02:0,12,309	0/0:11,0:11:24.08:0,24,878
chr10	96619778	.	T	TGTGTGC	2473.04	PASS	AB=0.898;AC=20;AF=0.385;AN=52;BaseQRankSum=-3.859;DP=486;FS=13.412;HRun=0;HaplotypeScore=134.0791;InbreedingCoeff=0.6370;MQ=56.04;MQ0=8;MQRankSum=-4.349;QD=11.19;ReadPosRankSum=-1.447;VQSLOD=1.9570;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:96.95:271,0,97	1/1:4,0:4:8.95:102,9,0	0/0:6,0:2:2.94:0,3,18	./.	0/1:8,1:24:0.03:0,0,0	0/0:19,0:19:34.30:0,34,567	0/0:29,0:29:71.33:0,71,762	1/1:21,0:19:42.43:293,42,0	0/0:10,0:10:25.72:0,26,299	0/0:22,0:22:32.60:0,33,669	0/0:17,0:17:38.82:0,39,461	0/0:11,0:11:29.92:0,30,377	0/0:9,0:9:26.94:0,27,355	0/0:18,0:18:50.50:0,50,612	1/1:11,0:11:11.25:148,11,0	0/1:12,0:12:19.64:20,0,53	0/0:18,0:18:23.79:0,24,246	0/0:15,0:15:32.73:0,33,397	1/1:10,0:21:43.21:440,43,0	1/1:4,15:20:3.01:108,3,0	1/1:26,0:24:4.30:200,4,0	0/0:23,0:23:53.56:0,54,558	0/0:13,0:12:23.83:0,24,191	0/0:31,0:31:86.70:0,87,1320	./.	0/1:26,0:26:13.24:503,0,13	1/1:14,1:15:17.58:191,18,0	1/1:13,0:13:33.66:382,34,0
chr10	96620124	.	A	AG	1000.05	PASS	AB=0.977;AC=5;AF=0.089;AN=56;BaseQRankSum=2.070;DP=574;FS=11.348;HRun=6;HaplotypeScore=112.5622;InbreedingCoeff=0.8085;MQ=81.68;MQ0=3;MQRankSum=-0.357;QD=10.53;ReadPosRankSum=2.304;VQSLOD=1.0323;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,105,703	0/0:9,0:9:27.06:0,27,275	0/1:40,1:28:7.24:7,0,259	0/0:21,0:16:27.71:0,28,229	0/0:21,0:21:60.12:0,60,603	0/0:24,0:24:72.12:0,72,713	0/0:19,0:19:45.07:0,45,446	0/0:20,0:20:44.73:0,45,344	0/0:11,0:11:33.03:0,33,313	0/0:24,0:24:66.10:0,66,653	0/0:21,0:21:56.81:0,57,538	0/0:14,0:14:33.02:0,33,309	0/0:13,0:13:38.90:0,39,372	0/0:14,0:14:39.05:0,39,382	0/0:18,0:18:48.10:0,48,484	0/0:13,0:13:31.47:0,31,208	1/1:5,27:32:42.54:558,43,0	1/1:5,16:21:54.04:561,54,0	0/0:25,0:25:67.86:0,68,512	0/0:19,0:19:45.91:0,46,321	0/0:16,0:16:38.41:0,38,275	0/0:17,0:17:48.06:0,48,470	0/0:17,0:17:45.05:0,45,442	0/0:17,0:17:42.06:0,42,414	0/0:17,0:17:45.09:0,45,454	0/0:30,0:29:87.18:0,87,882	0/0:19,0:19:42.96:0,43,257	0/0:16,0:16:31.60:0,32,183
chr10	96620132	.	C	CT	5389.76	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=-8.585;DP=576;FS=1.999;HRun=8;HaplotypeScore=102.1222;InbreedingCoeff=0.6662;MQ=81.70;MQ0=3;MQRankSum=-1.202;QD=17.79;ReadPosRankSum=-0.523;VQSLOD=4.3625;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,37:46:75.15:1033,75,0	0/0:9,0:9:24.01:0,24,220	0/0:44,0:30:21.18:0,21,261	0/0:19,0:14:21.82:0,22,147	0/0:23,0:22:60:0,60,541	0/1:26,0:26:17.01:17,0,109	0/0:16,0:16:7.04:0,7,76	1/1:4,18:22:48.08:525,48,0	0/0:11,0:11:7.20:0,7,61	0/0:23,0:23:40.15:0,40,138	0/1:22,0:22:10.99:11,0,96	0/1:12,0:12:30.07:30,0,33	0/0:13,0:13:2.76:0,3,60	0/0:13,0:13:27.12:0,27,96	0/0:17,0:17:45.02:0,45,412	1/1:1,12:13:36.10:412,36,0	1/1:31,0:31:29.40:558,29,0	1/1:20,0:20:56.83:588,57,0	1/1:7,20:27:60.16:675,60,0	1/1:4,13:17:39.07:433,39,0	1/1:4,11:15:18.31:316,18,0	0/1:18,0:18:16.04:16,0,68	0/0:17,0:17:19.25:0,19,101	0/0:16,0:16:30.54:0,31,100	0/0:21,0:21:53.99:0,54,483	0/0:31,0:30:81.38:0,81,690	1/1:2,18:20:42.08:467,42,0	1/1:3,11:14:27.08:309,27,0
chr10	96626762	.	A	AGGCATTCG	2084.15	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.483;DP=654;FS=1.838;HRun=0;HaplotypeScore=162.8786;InbreedingCoeff=0.9903;MQ=86.98;MQ0=0;MQRankSum=-7.092;QD=65.13;ReadPosRankSum=0.316;VQSLOD=3.3290;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,175,4725	0/0:5,0:5:15.03:0,15,368	0/0:28,0:28:75.25:0,75,1935	0/0:17,0:17:44.88:0,45,1076	0/0:14,0:14:33.11:0,33,907	0/0:17,0:17:51.18:0,51,1452	0/0:29,0:29:87.28:0,87,2381	0/0:43,0:43:99:0,120,3073	0/0:19,0:19:54.19:0,54,1515	0/0:25,0:25:75.22:0,75,1973	0/0:18,0:18:54.17:0,54,1454	0/0:28,0:28:81.25:0,81,2191	0/0:19,0:19:54.17:0,54,1469	0/0:17,0:17:48.16:0,48,1338	0/0:21,0:21:63.22:0,63,1746	0/0:22,0:22:63.21:0,63,1686	1/1:8,8:20:30.10:1172,30,0	1/1:6,6:12:27.09:1033,27,0	0/0:23,0:23:63.22:0,63,1713	0/0:21,0:21:60.21:0,60,1658	0/0:50,0:50:99:0,147,3771	0/0:32,0:32:81.24:0,81,2321	0/0:18,0:18:51.18:0,51,1438	0/0:28,0:28:81.28:0,81,2307	0/0:14,0:14:36.12:0,36,1033	0/0:20,0:20:57.20:0,57,1586	0/0:22,0:22:63.22:0,63,1806	0/0:11,0:11:27.09:0,27,775
chr10	96626908	.	TAA	T	1665.17	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.150;DP=551;FS=7.363;HRun=3;HaplotypeScore=65.3857;InbreedingCoeff=0.9974;MQ=87.61;MQ0=0;MQRankSum=-1.560;QD=37.00;ReadPosRankSum=3.265;VQSLOD=2.9805;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:99:0,108,2043	0/0:7,0:7:21.07:0,21,387	0/0:17,0:17:51.17:0,51,981	0/0:23,0:23:60.16:0,60,1079	0/0:24,0:24:69.23:0,69,1289	0/0:21,0:21:63.20:0,63,1128	0/0:14,0:14:42.13:0,42,749	0/0:31,0:31:93.28:0,93,1723	0/0:17,0:17:48.16:0,48,872	0/0:33,0:33:96.30:0,96,1717	0/0:19,0:19:54.18:0,54,1007	0/0:13,0:13:39.13:0,39,744	0/0:17,0:17:48.16:0,48,888	0/0:18,0:18:54.19:0,54,1021	0/0:13,0:13:39.11:0,39,688	0/0:10,0:10:30.10:0,30,579	1/1:0,23:23:63.21:962,63,0	1/1:1,21:22:54.18:825,54,0	0/0:19,0:19:57.13:0,57,938	0/0:19,0:19:54.15:0,54,948	0/0:20,0:20:60.18:0,60,1094	0/0:13,0:13:36.12:0,36,696	0/0:23,0:23:63.18:0,63,1120	0/0:13,0:13:36.12:0,36,695	0/0:20,0:20:60.21:0,60,1151	0/0:25,0:25:75.25:0,75,1390	0/0:22,0:22:66.21:0,66,1241	0/0:16,0:16:48.13:0,48,837
chr10	96627926	.	A	AT	909.14	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.284;DP=425;FS=3.719;HRun=5;HaplotypeScore=43.5662;InbreedingCoeff=0.9291;MQ=75.58;MQ0=0;MQRankSum=-3.463;QD=25.98;ReadPosRankSum=1.289;VQSLOD=3.0111;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:99:0,108,1141	0/0:8,0:8:18.03:0,18,187	0/0:9,0:9:21.04:0,21,216	0/0:12,0:12:23.35:0,23,206	0/0:19,0:19:45.11:0,45,483	0/0:19,0:19:57.09:0,57,585	0/0:14,0:14:36.09:0,36,387	0/0:30,0:30:71.99:0,72,718	0/0:7,0:7:21.05:0,21,225	0/0:20,0:20:54.14:0,54,580	0/0:10,0:10:26.10:0,26,264	0/0:9,0:9:27.07:0,27,290	0/0:9,0:9:27.07:0,27,290	0/0:12,0:12:33.08:0,33,353	0/0:23,0:23:63.12:0,63,654	0/0:12,0:12:33.08:0,33,354	1/1:6,16:22:54.09:657,54,0	1/1:3,10:13:30.05:373,30,0	0/0:14,0:13:30.07:0,30,317	0/0:19,0:19:51.13:0,51,548	0/0:9,0:9:24.06:0,24,258	0/0:3,0:3:6.01:0,6,64	0/0:14,0:14:36.09:0,36,387	0/0:12,0:12:36.09:0,36,386	0/0:19,0:19:47.90:0,48,509	0/0:20,0:20:60.13:0,60,636	0/0:23,0:23:57.10:0,57,594	0/0:5,0:5:15.04:0,15,161
chr10	96627979	.	T	TA	1596.97	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.395;DP=458;FS=2.267;HRun=1;HaplotypeScore=44.6177;InbreedingCoeff=0.9101;MQ=56.45;MQ0=1;MQRankSum=0.613;QD=39.92;ReadPosRankSum=-0.089;VQSLOD=3.7964;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1636	0/0:2,0:2:5.93:0,6,59	0/0:13,0:8:24.08:0,24,323	0/0:15,0:8:20.98:0,21,255	0/0:18,0:18:48.16:0,48,671	0/0:18,0:18:54.18:0,54,753	0/0:16,0:16:48.16:0,48,671	0/0:30,0:30:90.28:0,90,1212	0/0:14,0:14:42.14:0,42,587	0/0:18,0:18:54.16:0,54,736	0/0:11,0:11:27.08:0,27,361	0/0:19,0:19:54.17:0,54,738	0/0:7,0:7:18.06:0,18,252	0/0:14,0:14:42.14:0,42,587	0/0:22,0:22:63.21:0,63,879	0/0:15,0:15:45.14:0,45,611	1/1:0,25:25:66.23:1051,66,0	1/1:0,15:15:42.14:667,42,0	0/0:10,0:10:30.10:0,30,418	0/0:13,0:13:39.13:0,39,545	0/0:18,0:18:54.16:0,54,737	0/0:7,0:7:18.06:0,18,252	0/0:14,0:14:39.13:0,39,544	0/0:14,0:14:42.14:0,42,587	0/0:11,0:11:30.10:0,30,419	0/0:29,0:29:87.28:0,87,1203	0/0:28,0:27:81.27:0,81,1129	0/0:3,0:3:9.03:0,9,126
chr10	96628334	.	ATTACATTTTAAAAAAGCCAGATGTGGGGTTGGGGAT	A	168.24	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=2.839;DP=316;FS=3.170;HRun=0;HaplotypeScore=157.6002;InbreedingCoeff=0.3168;MQ=41.92;MQ0=28;MQRankSum=-2.328;QD=14.02;ReadPosRankSum=-1.197;VQSLOD=2.6038;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:4:5.11:0,5,385	0/0:6,0:1:2.22:0,2,7	0/0:5,0:1:3.01:0,3,53	0/0:10,0:8:9.03:0,9,476	0/0:16,0:14:30.10:0,30,3359	0/0:13,0:12:15.05:0,15,1147	0/0:30,0:21:63.22:0,63,4587	0/0:10,0:10:18.04:0,18,1549	0/0:20,0:17:51.18:0,51,5338	0/0:14,0:13:27.09:0,27,1762	0/0:7,0:7:12.04:0,12,1063	0/0:7,0:7:12.04:0,12,653	0/0:4,0:4:6.02:0,6,262	0/0:8,0:8:21.07:0,21,1666	./.	0/0:11,3:9:3.01:0,3,133	1/1:6,6:8:3.01:245,3,0	0/0:19,0:15:45.15:0,45,4059	0/0:15,0:13:27.09:0,27,2064	0/0:10,0:5:12.01:0,12,738	0/0:8,0:7:15.05:0,15,1551	0/0:14,0:13:27.09:0,27,1879	0/0:16,0:12:29.42:0,29,2605	0/0:11,0:6:9.01:0,9,544	0/0:9,0:7:21.05:0,21,1492	0/0:21,0:19:27.56:0,28,2168	0/0:5,0:4:3.01:0,3,244
chr10	96628460	.	A	ATCTG	4025.39	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-7.806;DP=529;FS=0.000;HRun=0;HaplotypeScore=97.1357;InbreedingCoeff=0.9567;MQ=61.01;MQ0=3;MQRankSum=-1.220;QD=31.70;ReadPosRankSum=-2.267;VQSLOD=2.7051;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:42.11:0,42,624	0/0:8,0:8:15.05:0,15,246	0/0:17,0:12:24.07:0,24,341	0/0:18,0:16:26.29:0,26,358	0/0:23,0:23:47.95:0,48,782	0/0:28,0:28:65.81:0,66,1041	0/0:20,0:20:42.14:0,42,671	1/1:31,3:32:48:697,48,0	0/0:14,0:14:24.07:0,24,367	0/0:15,0:15:27.09:0,27,442	0/0:22,0:22:51.12:0,51,790	0/0:15,0:15:24.05:0,24,344	0/0:15,0:15:24.05:0,24,345	0/0:16,0:16:30.10:0,30,491	0/0:17,0:17:36.12:0,36,590	0/0:9,0:9:21.07:0,21,344	0/0:27,0:26:54.18:0,54,881	0/0:15,0:15:15.05:0,15,246	1/1:17,11:27:33.09:755,33,0	1/1:4,18:21:51.18:1242,51,0	1/1:4,13:19:27.09:658,27,0	0/0:21,0:21:39.13:0,39,634	0/0:14,0:14:33.11:0,33,539	0/0:36,0:35:66.23:0,66,1081	0/0:6,0:6:9.03:0,9,147	0/0:21,0:21:54.18:0,54,886	1/1:12,6:18:24:528,24,0	1/1:3,2:5:6.02:146,6,0
chr10	96628519	.	A	AGT	1024.64	PASS	AB=0.736;AC=3;AF=0.054;AN=56;BaseQRankSum=5.852;DP=603;FS=36.537;HRun=0;HaplotypeScore=139.7359;InbreedingCoeff=0.1050;MQ=60.07;MQ0=12;MQRankSum=0.053;QD=15.07;ReadPosRankSum=-2.115;VQSLOD=1.6945;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:38:26.43:0,26,302	0/0:10,0:10:7.12:0,7,198	0/0:34,0:17:48.01:0,48,613	0/0:36,0:15:5.46:0,5,350	0/0:20,0:20:9.87:0,10,249	0/0:23,0:23:46.18:0,46,505	0/0:23,0:22:18.76:0,19,277	0/0:28,0:27:35.39:0,35,824	0/0:14,0:14:19.63:0,20,193	0/0:15,0:14:30.48:0,30,409	0/0:22,0:20:20.21:0,20,241	0/0:19,0:19:14.65:0,15,204	0/0:14,0:14:10.88:0,11,151	0/0:18,0:17:13.34:0,13,352	0/0:24,0:24:8.44:0,8,321	0/0:12,0:12:16.30:0,16,214	0/1:14,25:38:3.81:756,0,4	0/1:7,14:20:9.27:356,0,9	0/0:21,0:20:6.28:0,6,639	0/0:20,0:19:29.82:0,30,350	0/0:28,0:27:35.14:0,35,421	0/0:16,0:16:23.19:0,23,334	0/0:12,0:12:5.60:0,6,226	0/0:40,0:40:71.18:0,71,721	0/1:8,0:8:5.04:5,0,33	0/0:24,0:23:49.79:0,50,764	0/0:16,0:16:18.04:0,18,187	0/0:4,0:3:9.02:0,9,104
chr10	96628521	.	A	AGTGT	5896.80	PASS	AB=0.917;AC=45;AF=0.833;AN=54;BaseQRankSum=0.433;DP=644;FS=6.928;HRun=0;HaplotypeScore=148.9939;InbreedingCoeff=0.2889;MQ=57.20;MQ0=13;MQRankSum=1.701;QD=10.78;ReadPosRankSum=-1.427;VQSLOD=3.7145;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:37:9.47:102,9,0	1/1:4,0:10:7.92:73,8,0	0/0:37,0:15:3.01:0,3,48	0/0:37,0:13:3.01:0,3,44	1/1:21,0:21:3.01:45,3,0	1/1:11,8:21:17.80:372,18,0	1/1:12,9:24:12.87:185,13,0	1/1:31,0:30:21.19:201,21,0	1/1:7,7:16:14.79:300,15,0	1/1:12,6:19:20.96:367,21,0	1/1:14,5:20:8.77:156,9,0	1/1:5,12:19:29.57:600,30,0	1/1:7,6:14:14.45:239,14,0	0/1:14,6:20:26.95:381,0,27	1/1:13,1:24:13.09:162,13,0	1/1:12,0:18:6.02:101,6,0	0/1:40,0:39:43.47:467,0,43	0/1:23,0:22:30.20:307,0,30	1/1:22,0:21:15.02:252,15,0	1/1:19,0:19:6.01:75,6,0	1/1:30,0:29:15.01:189,15,0	0/0:10,1:18:6.48:0,6,77	1/1:10,2:13:5.75:84,6,0	1/1:16,22:44:41.61:889,42,0	1/1:1,0:9:5.05:58,5,0	1/1:16,0:23:15.02:187,15,0	1/1:8,0:21:6.14:105,6,0	./.
chr10	96633936	.	G	GACAGCCAGGACACTGTGTCT	38236.09	PASS	AB=0.819;AC=53;AF=0.946;AN=56;BaseQRankSum=-2.296;DP=420;FS=8.129;HRun=0;HaplotypeScore=568.6644;InbreedingCoeff=-0.0579;MQ=64.26;MQ0=0;MQRankSum=-1.290;QD=91.04;ReadPosRankSum=2.364;VQSLOD=3.9310;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:24.33:1374,24,0	1/1:10,0:10:17.79:555,18,0	0/1:9,0:11:5.40:1254,0,5	0/1:4,1:11:28.70:1118,0,29	1/1:14,0:13:9.65:386,10,0	1/1:12,0:12:26.30:1406,26,0	0/1:9,0:8:0.76:687,0,1	1/1:18,0:17:48.12:2585,48,0	1/1:21,0:20:36.59:1940,37,0	1/1:31,0:31:74.22:3879,74,0	1/1:10,0:10:9.49:534,9,0	1/1:17,0:16:28.18:1329,28,0	1/1:23,0:23:38.36:1561,38,0	1/1:13,0:13:20.03:910,20,0	1/1:19,0:19:30.26:1313,30,0	1/1:29,0:29:64.68:2864,65,0	1/1:10,0:10:21.04:1028,21,0	1/1:4,0:4:6.49:231,6,0	1/1:6,0:6:14.54:498,15,0	1/1:19,0:18:32.62:1598,33,0	1/1:16,0:16:25.51:953,26,0	1/1:22,0:21:35.70:1377,36,0	1/1:13,0:13:16.40:1052,16,0	1/1:8,0:8:8.71:584,9,0	1/1:16,0:16:34.46:1646,34,0	1/1:13,0:13:27.75:1760,28,0	1/1:15,0:15:36.73:2721,37,0	1/1:12,0:12:7.91:1092,8,0
chr10	96633937	.	A	ACAGCCAGGACACTGTGTCT	2233.42	PASS	AB=0.759;AC=26;AF=0.929;AN=28;BaseQRankSum=-1.452;DP=43;FS=6.429;HRun=0;HaplotypeScore=34.5684;InbreedingCoeff=-0.2370;MQ=155.48;MQ0=0;MQRankSum=-0.691;QD=58.77;ReadPosRankSum=-1.244;VQSLOD=1.2666;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:3.01:47,3,0	./.	0/1:4,1:9:8.41:1126,0,8	0/1:6,0:7:40.74:386,0,41	./.	./.	./.	1/1:2,0:2:3.01:55,3,0	./.	./.	1/1:1,0:1:3.01:91,3,0	1/1:1,0:1:3.01:50,3,0	./.	1/1:1,0:1:3:25,3,0	1/1:3,0:3:3.01:50,3,0	1/1:1,0:1:2.98:22,3,0	1/1:3,0:3:2.98:22,3,0	./.	1/1:1,0:1:3.01:110,3,0	1/1:1,0:1:3.01:49,3,0	1/1:3,0:3:9.01:216,9,0	1/1:3,0:3:8.98:72,9,0	./.	./.	./.	./.	./.	./.
chr10	96634127	.	ATG	A	7114.60	PASS	AB=0.771;AC=18;AF=0.321;AN=56;BaseQRankSum=5.835;DP=1602;FS=8.515;HRun=0;HaplotypeScore=243.8295;InbreedingCoeff=0.6427;MQ=40.15;MQ0=102;MQRankSum=0.278;QD=11.51;ReadPosRankSum=0.446;VQSLOD=3.3599;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:44:50.92:0,51,846	0/1:12,9:16:4.38:291,0,4	0/0:27,0:5:12.03:0,12,159	0/0:41,0:4:9.03:0,9,148	1/1:30,15:44:24.06:304,24,0	0/0:42,0:38:51.65:0,52,884	0/0:55,0:45:48.13:0,48,812	0/1:75,11:21:25.61:71,0,26	0/0:68,0:59:91.69:0,92,1461	0/0:106,0:99:99:0,256,4041	0/0:45,0:41:60.19:0,60,1008	0/0:77,0:70:84.05:0,84,1432	0/0:67,0:62:99:0,99,1681	0/0:65,0:51:51.17:0,51,847	1/1:32,36:59:40.13:506,40,0	0/0:78,0:69:96.26:0,96,1624	0/0:48,0:46:75.73:0,76,1238	0/0:53,0:49:72.21:0,72,1449	0/1:26,10:22:92.73:354,0,93	1/1:24,29:52:84.26:1102,84,0	1/1:74,63:112:99:2104,162,0	0/0:58,0:56:93.32:0,93,1582	0/0:45,0:40:63.20:0,63,1057	0/0:53,1:49:64.44:0,64,1066	1/1:23,20:39:16.91:272,17,0	0/1:43,29:62:99:1181,0,224	1/1:21,13:32:29.51:527,30,0	1/1:10,13:22:1.12:403,1,0
chr10	96634135	.	GTA	G	2316.83	PASS	AB=0.992;AC=16;AF=0.286;AN=56;BaseQRankSum=8.993;DP=1558;FS=3.812;HRun=0;HaplotypeScore=272.1085;InbreedingCoeff=0.5090;MQ=40.52;MQ0=107;MQRankSum=2.563;QD=3.82;ReadPosRankSum=2.368;VQSLOD=2.6219;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,1:41:33.94:0,34,926	1/1:21,0:16:13.55:130,14,0	0/0:24,0:5:12.04:0,12,210	0/0:39,0:4:9.03:0,9,161	1/1:41,0:40:20.10:109,20,0	0/0:41,0:38:53.16:0,53,981	0/0:51,0:42:47.98:0,48,925	0/1:92,1:24:30.95:31,0,190	0/0:72,0:62:99:0,104,1708	0/0:107,1:101:99:0,255,4275	0/0:40,0:37:57.20:0,57,1087	0/0:74,0:66:89.78:0,90,1603	0/0:66,0:61:99:0,108,1926	0/0:60,1:46:57.08:0,57,916	0/1:66,1:57:50.24:158,0,50	0/0:71,1:63:99:0,99,1857	0/0:48,0:45:84.14:0,84,1401	0/0:59,1:56:72.15:0,72,1599	0/1:36,0:23:77.16:118,0,77	1/1:45,0:42:55.85:402,56,0	1/1:136,6:117:41.59:697,42,0	0/0:54,0:51:96.27:0,96,1737	0/0:37,0:33:60.21:0,60,1129	0/0:54,0:49:73.73:0,74,1239	0/1:41,1:38:51.38:85,0,51	0/1:71,0:61:99:412,0,234	1/1:27,0:26:31.71:211,32,0	0/1:20,0:19:0.22:152,0,0
chr10	96634162	.	TG	T	3042.04	PASS	AB=0.654;AC=9;AF=0.161;AN=56;BaseQRankSum=-3.276;DP=1507;FS=6.418;HRun=1;HaplotypeScore=263.2764;InbreedingCoeff=0.7747;MQ=40.20;MQ0=125;MQRankSum=3.808;QD=12.78;ReadPosRankSum=-1.215;VQSLOD=2.1249;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:39:51.05:0,51,814	1/1:6,9:9:6.01:84,6,0	0/0:12,0:3:6.02:0,6,86	0/0:12,0:2:3.01:0,3,44	1/1:17,21:36:18.06:252,18,0	0/0:40,0:36:60.88:0,61,925	0/0:54,1:45:33.86:0,34,561	0/0:122,0:47:99:0,117,1619	0/0:74,0:61:99:0,120,1893	0/0:92,0:78:99:0,196,3075	0/0:36,0:33:57.19:0,57,901	0/0:66,0:57:90.78:0,91,1429	0/0:56,0:52:82.82:0,83,1420	0/0:61,0:46:63.21:0,63,998	1/1:20,49:58:59.02:872,59,0	0/0:68,0:58:99:0,99,1527	0/0:51,0:48:96.50:0,96,1461	0/0:47,0:44:99:0,104,1518	0/0:47,0:27:54.06:0,54,771	0/0:40,0:36:78.25:0,78,1195	0/0:156,0:125:99:0,179,2822	0/0:50,0:45:75.26:0,75,1188	0/0:33,0:29:57.18:0,57,886	0/0:53,0:48:66.23:0,66,1053	1/1:14,34:44:48.43:655,48,0	0/1:32,36:58:99:1336,0,338	0/0:30,0:28:48.16:0,48,744	0/0:19,0:18:48.12:0,48,708
chr10	96634197	.	A	ATG	13841.51	PASS	AB=0.865;AC=35;AF=0.625;AN=56;BaseQRankSum=-7.102;DP=1446;FS=2.428;HRun=0;HaplotypeScore=226.6838;InbreedingCoeff=0.4837;MQ=40.46;MQ0=113;MQRankSum=1.584;QD=11.66;ReadPosRankSum=-0.559;VQSLOD=4.1585;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:35:2.54:3,0,85	0/0:16,0:11:9.03:0,9,113	0/0:3,0:2:5.81:0,6,49	0/0:9,0:1:3.01:0,3,32	0/0:33,0:31:36.10:0,36,437	1/1:35,0:33:48.59:530,49,0	1/1:45,0:39:5.70:47,6,0	0/1:106,6:34:37.94:287,0,38	1/1:76,1:69:99:1335,123,0	1/1:89,0:67:99:1495,118,0	1/1:27,0:25:38.05:374,38,0	1/1:77,0:68:99:1043,99,0	1/1:57,0:54:81.50:928,82,0	1/1:72,0:57:87.20:951,87,0	0/0:67,0:60:99:0,108,1338	0/1:41,0:56:3.53:4,0,145	1/1:32,17:46:37.68:1013,38,0	0/1:31,16:47:54.73:956,0,55	0/1:31,7:24:59.99:545,0,60	1/1:18,15:27:21.07:336,21,0	1/1:87,35:94:99:1588,99,0	1/1:48,0:42:60.13:649,60,0	1/1:32,0:27:45.12:495,45,0	1/1:50,0:46:69.15:748,69,0	0/0:46,0:43:50.43:0,50,760	0/0:82,0:79:59.25:0,59,1787	0/1:27,8:31:0.70:471,0,1	0/1:7,5:12:31.49:43,0,31
chr10	96634201	.	G	GTA	4345.81	PASS	AB=0.995;AC=28;AF=0.500;AN=56;BaseQRankSum=2.032;DP=1419;FS=5.550;HRun=0;HaplotypeScore=256.6008;InbreedingCoeff=0.0870;MQ=40.83;MQ0=105;MQRankSum=5.794;QD=3.90;ReadPosRankSum=6.937;VQSLOD=2.7752;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:35:43.79:44,0,108	0/0:17,0:12:9.03:0,9,138	0/0:3,0:2:6.02:0,6,80	0/0:9,0:1:3.01:0,3,46	0/0:32,0:31:36.12:0,36,548	1/1:36,1:34:16.53:112,17,0	0/0:43,1:38:4.20:0,4,28	0/1:110,0:31:93.16:93,0,267	1/1:77,0:67:4.77:243,5,0	0/1:90,0:69:99:351,0,255	0/1:26,0:25:1.24:53,0,1	1/1:76,0:67:23.62:186,24,0	0/1:56,0:52:57.36:174,0,57	1/1:69,0:55:27.21:198,27,0	0/0:68,0:59:99:0,117,1690	0/1:64,0:56:61.65:62,0,267	0/1:47,0:44:91.97:461,0,92	0/1:47,2:46:99:501,0,155	0/1:39,0:24:25.05:305,0,25	1/1:32,0:26:20.94:167,21,0	1/1:115,1:90:97.94:792,98,0	0/1:48,0:43:1.17:106,0,1	0/1:35,0:30:46.92:86,0,47	1/1:52,0:46:13.39:146,13,0	0/0:46,0:44:52.95:0,53,971	0/0:87,0:81:99:0,150,2428	1/1:35,0:32:1.34:253,1,0	0/1:10,0:10:13.63:14,0,76
chr10	96634205	.	G	GTA	18635.23	PASS	AB=0.983;AC=34;AF=0.607;AN=56;BaseQRankSum=-11.413;DP=1408;FS=3.552;HRun=0;HaplotypeScore=206.1265;InbreedingCoeff=0.3184;MQ=41.21;MQ0=100;MQRankSum=3.739;QD=15.61;ReadPosRankSum=0.702;VQSLOD=4.8905;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:35:1.47:0,1,102	0/0:16,0:14:12.03:0,12,163	0/0:3,0:2:6.02:0,6,79	0/0:9,0:1:3.01:0,3,45	0/0:30,0:29:36.12:0,36,548	1/1:19,19:35:53.91:958,54,0	1/1:36,13:41:17.44:189,17,0	0/1:109,0:29:91.83:92,0,255	1/1:33,44:67:99:2371,132,0	1/1:50,39:70:99:2696,107,0	1/1:15,12:26:42.13:713,42,0	1/1:39,36:65:99:1939,110,0	1/1:25,30:51:99:1753,105,0	1/1:45,26:57:99:1768,102,0	0/0:69,0:60:99:0,120,1725	0/1:60,1:54:99:135,0,192	0/1:47,0:43:74.25:445,0,74	0/1:47,1:45:61.38:465,0,61	0/1:36,0:24:86.19:354,0,86	1/1:26,2:25:20.93:165,21,0	1/1:104,9:84:97.93:792,98,0	1/1:24,29:48:69.20:1214,69,0	1/1:20,15:31:57.11:960,57,0	1/1:21,25:43:75.21:1352,75,0	0/0:44,0:42:53.48:0,53,971	0/1:84,4:81:12.63:13,0,2298	0/1:29,2:33:39.59:246,0,40	0/1:10,0:10:16.59:17,0,33
chr10	96634766	.	GCACACACA	G	276.01	PASS	AB=0.955;AC=6;AF=0.111;AN=54;BaseQRankSum=1.672;DP=499;FS=2.749;HRun=0;HaplotypeScore=128.5946;InbreedingCoeff=0.2707;MQ=64.49;MQ0=19;MQRankSum=-1.297;QD=3.21;ReadPosRankSum=0.513;VQSLOD=2.3216;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:2.98:0,3,21	0/0:7,0:7:2.90:0,3,30	./.	0/0:30,0:11:3:0,3,27	0/0:11,0:9:3:0,3,27	0/0:15,0:15:10.59:0,11,303	0/0:29,0:27:33.57:0,34,894	0/0:19,0:19:22.88:0,23,481	0/0:16,0:16:12.94:0,13,284	0/0:22,0:20:30.08:0,30,587	0/0:6,0:5:3.48:0,3,76	0/0:15,0:15:15.05:0,15,454	0/0:8,0:8:12.04:0,12,261	0/0:12,0:11:9.03:0,9,318	0/1:18,1:19:48.89:49,0,144	0/0:5,0:14:17.73:0,18,380	1/1:13,9:22:9.03:157,9,0	1/1:17,0:17:3.01:66,3,0	0/0:11,0:10:4.57:0,5,113	0/0:14,0:14:18.03:0,18,451	0/0:26,0:26:17.71:0,18,524	0/0:15,0:15:9.03:0,9,260	0/0:13,0:12:20.99:0,21,476	0/0:32,0:32:32.97:0,33,911	0/0:10,0:9:6.86:0,7,41	0/1:26,0:25:99:120,0,528	0/0:18,0:17:18.06:0,18,591	0/0:8,0:8:14.97:0,15,237
chr10	96634799	.	CACACACACAG	C	201.84	PASS	AB=0.930;AC=4;AF=0.071;AN=56;BaseQRankSum=0.004;DP=498;FS=0.000;HRun=0;HaplotypeScore=138.0696;InbreedingCoeff=-0.1123;MQ=46.49;MQ0=14;MQRankSum=0.749;QD=1.87;ReadPosRankSum=1.151;VQSLOD=2.5863;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:42.19:0,42,583	0/0:6,0:6:2.90:0,3,30	0/0:5,0:2:5.95:0,6,43	0/0:8,0:2:2.98:0,3,21	0/0:18,0:14:3.01:0,3,52	0/0:18,0:17:28.85:0,29,540	0/0:23,0:21:48.94:0,49,1048	0/0:19,0:18:46.79:0,47,798	0/0:16,0:15:12.94:0,13,288	0/0:24,0:23:66.01:0,66,1152	0/0:10,0:9:9.48:0,9,143	0/0:18,0:18:14.97:0,15,482	0/0:10,0:9:15.05:0,15,364	0/0:18,0:16:12.92:0,13,375	0/1:23,0:20:29.72:30,0,170	0/0:15,0:15:26.55:0,27,603	0/1:30,0:29:99:139,0,293	0/1:11,7:17:75.65:76,0,158	0/0:14,0:11:13.60:0,14,395	0/0:13,0:13:31.40:0,31,538	0/0:17,0:16:18.65:0,19,534	0/0:14,0:14:21.06:0,21,484	0/0:12,0:12:23.93:0,24,494	0/0:29,0:29:36.02:0,36,965	0/0:14,0:13:6.86:0,7,41	0/1:37,0:32:65.78:66,0,1103	0/0:16,0:14:21.07:0,21,690	0/0:7,0:7:14.97:0,15,237
chr10	96634805	.	CACAG	C	104.97	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-1.865;DP=502;FS=20.165;HRun=0;HaplotypeScore=110.5295;InbreedingCoeff=-0.1258;MQ=46.78;MQ0=17;MQRankSum=3.314;QD=0.48;ReadPosRankSum=-0.085;VQSLOD=0.9297;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,20:45:44.57:0,45,360	0/0:3,0:3:2.99:0,3,24	0/0:5,0:4:5.11:0,5,60	0/0:5,0:3:5.96:0,6,44	1/1:10,0:14:2.98:21,3,0	0/0:20,0:19:15.42:0,15,294	0/1:29,0:27:22.66:23,0,327	0/0:19,0:16:28.25:0,28,167	0/1:17,0:16:32.90:33,0,57	0/0:24,0:22:36.05:0,36,508	0/0:11,0:10:10.80:0,11,79	0/1:18,0:18:6.74:7,0,107	0/0:11,0:10:2.56:0,3,79	0/0:18,0:16:12.78:0,13,89	0/1:22,0:19:38.84:39,0,90	0/0:15,0:15:23.35:0,23,153	0/1:30,0:29:50.40:50,0,223	0/1:19,0:18:8.92:9,0,175	0/0:13,0:10:0.06:0,0,90	0/0:12,0:12:27.68:0,28,222	0/0:17,0:16:14.39:0,14,116	0/1:14,0:14:2.47:2,0,163	0/0:8,0:14:23.70:0,24,180	0/0:26,0:26:13.82:0,14,207	0/1:5,0:14:14.89:32,0,15	0/1:37,0:32:24.54:25,0,536	0/0:18,0:16:26.99:0,27,277	0/0:5,0:4:8.94:0,9,67
chr10	96634807	.	C	CAGAGAGAG	6473.54	PASS	AB=0.794;AC=33;AF=0.688;AN=48;BaseQRankSum=1.447;DP=538;FS=0.000;HRun=0;HaplotypeScore=132.9734;InbreedingCoeff=0.6430;MQ=46.04;MQ0=18;MQRankSum=-2.662;QD=17.78;ReadPosRankSum=-1.862;VQSLOD=3.7868;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:44.64:0,45,1081	./.	0/0:6,0:5:15.01:0,15,230	0/0:5,0:3:6.02:0,6,148	./.	1/1:22,0:21:27.98:744,28,0	1/1:30,0:28:27.09:716,27,0	1/1:22,0:18:4.78:89,5,0	0/1:9,0:17:0.11:0,0,0	1/1:25,0:23:41.58:1028,42,0	1/1:12,0:11:9.03:249,9,0	1/1:11,6:21:3.18:123,3,0	1/1:7,5:13:3.01:91,3,0	./.	1/1:26,0:22:6.01:81,6,0	0/0:14,0:14:24.55:0,25,575	0/0:31,0:30:47.30:0,47,1052	0/0:19,0:18:30.10:0,30,717	1/1:12,0:13:18.06:498,18,0	1/1:13,0:13:15.92:340,16,0	1/1:19,0:17:3.01:50,3,0	0/1:14,0:14:18.44:305,0,18	1/1:13,1:14:8.96:69,9,0	0/1:18,9:30:0.06:0,0,0	./.	1/1:42,0:37:65.40:1654,65,0	1/1:19,0:18:17.09:390,17,0	1/1:6,0:5:4.56:44,5,0
chr10	96635867	.	CTGTGTGTGTG	C	6417.94	PASS	AB=0.710;AC=44;AF=0.815;AN=54;BaseQRankSum=3.019;DP=736;FS=7.089;HRun=0;HaplotypeScore=222.5100;InbreedingCoeff=-0.1443;MQ=48.53;MQ0=18;MQRankSum=-1.697;QD=9.68;ReadPosRankSum=4.586;VQSLOD=2.8472;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:53:8.88:188,9,0	0/1:9,1:16:5.90:111,0,6	./.	0/0:39,0:12:3.01:0,3,42	0/1:14,1:22:33.66:50,0,34	0/1:11,0:26:7.54:110,0,8	1/1:17,8:25:2.80:90,3,0	1/1:22,9:31:19.84:262,20,0	1/1:14,14:28:15.05:428,15,0	1/1:10,12:22:1.54:792,2,0	1/1:6,4:10:3.48:91,3,0	1/1:12,11:25:12.30:340,12,0	1/1:7,8:14:8.99:269,9,0	1/1:11,15:26:11.63:360,12,0	1/1:8,0:20:6.01:59,6,0	1/1:13,0:24:24.08:558,24,0	0/1:25,0:45:99:251,0,180	0/1:19,1:26:99:138,0,179	1/1:11,4:14:11.86:308,12,0	1/1:9,6:17:5.86:119,6,0	0/1:28,12:40:17.31:169,0,17	1/1:13,12:25:5.31:437,5,0	1/1:12,1:15:9.03:138,9,0	1/1:22,23:48:12.82:342,13,0	0/1:13,0:27:18.03:153,0,18	0/1:22,1:37:63.02:294,0,63	1/1:9,10:19:9.03:270,9,0	1/1:4,1:5:3.01:90,3,0
chr10	96637018	.	T	TGAACGAAC	23970.53	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.953;DP=664;FS=0.749;HRun=0;HaplotypeScore=142.4541;InbreedingCoeff=0.8471;MQ=69.11;MQ0=0;MQRankSum=-8.088;QD=39.17;ReadPosRankSum=4.129;VQSLOD=4.2390;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,17:36:39.13:1513,39,0	1/1:3,8:14:9.03:311,9,0	0/0:27,0:25:38.90:0,39,648	0/0:25,0:24:39.12:0,39,767	1/1:12,6:30:17.76:414,18,0	1/1:5,9:16:21.07:875,21,0	1/1:3,18:25:24.08:1001,24,0	1/1:40,0:40:85.59:1307,86,0	1/1:4,21:33:29.55:1364,30,0	1/1:11,13:28:35.21:1133,35,0	1/1:4,5:13:9.03:375,9,0	1/1:7,6:19:18.06:744,18,0	1/1:5,9:15:21.07:868,21,0	1/1:5,13:20:27.09:1116,27,0	1/1:10,16:28:33.11:1323,33,0	1/1:3,21:29:30.10:1251,30,0	1/1:5,9:17:15.05:606,15,0	1/1:4,10:15:6.02:251,6,0	1/1:8,6:22:41.91:1124,42,0	1/1:10,13:27:38.66:1190,39,0	1/1:8,14:25:9.03:243,9,0	1/1:6,15:26:32.79:1148,33,0	1/1:7,8:20:20.96:765,21,0	1/1:7,18:29:27.09:907,27,0	1/1:2,9:13:18.06:731,18,0	1/1:7,17:29:55.94:1290,56,0	1/1:15,12:29:27.09:1120,27,0	1/1:0,8:14:24.08:1001,24,0
chr10	96637629	.	TA	T	3147.92	PASS	AB=0.952;AC=31;AF=0.554;AN=56;BaseQRankSum=-0.257;DP=424;FS=8.454;HRun=13;HaplotypeScore=99.7515;InbreedingCoeff=0.8987;MQ=73.36;MQ0=1;MQRankSum=-1.957;QD=12.54;ReadPosRankSum=4.545;VQSLOD=3.1252;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,21:28:24.47:343,24,0	1/1:2,4:6:11.93:88,12,0	0/0:21,0:15:6.91:0,7,65	0/1:19,0:13:13.35:13,0,50	1/1:7,15:22:23.63:250,24,0	0/0:2,0:9:25.81:0,26,142	0/0:5,0:11:28.79:0,29,162	1/1:6,11:17:32.77:240,33,0	0/0:2,0:17:23.01:0,23,134	0/0:6,0:19:43.05:0,43,244	0/0:5,0:14:28.85:0,29,162	0/0:5,0:20:34.51:0,35,209	0/0:3,0:9:21.44:0,21,126	0/0:5,0:7:14.50:0,15,91	1/1:1,11:11:29.82:218,30,0	1/1:2,12:15:34.84:247,35,0	1/1:2,5:8:13.85:86,14,0	1/1:3,9:13:28.88:203,29,0	1/1:3,16:20:27.58:331,28,0	1/1:1,8:10:25.89:181,26,0	1/1:2,11:13:24.31:176,24,0	0/0:4,0:13:22.73:0,23,114	0/0:7,0:13:17:0,17,84	0/0:6,1:20:12.57:0,13,159	1/1:4,8:12:17.88:131,18,0	1/1:3,28:32:49.70:540,50,0	1/1:4,7:12:25.79:174,26,0	1/1:3,7:10:20.83:153,21,0
chr10	96637669	.	TG	T	1104.18	PASS	AB=0.805;AC=12;AF=0.214;AN=56;BaseQRankSum=7.229;DP=524;FS=0.000;HRun=2;HaplotypeScore=220.9481;InbreedingCoeff=-0.2905;MQ=53.33;MQ0=10;MQRankSum=-7.892;QD=5.78;ReadPosRankSum=-2.145;VQSLOD=-0.4526;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:29:81.09:0,81,1143	0/1:7,3:10:57.99:58,0,146	0/0:48,0:18:49.89:0,50,574	0/0:42,0:19:41.12:0,41,481	0/0:24,7:31:6.02:0,6,83	0/0:14,0:13:26.64:0,27,359	0/0:11,1:12:33.11:0,33,490	0/1:6,10:16:99:287,0,162	0/0:16,3:19:29.68:0,30,366	0/0:25,1:26:34.64:0,35,878	0/0:17,1:18:20.45:0,20,288	0/0:17,1:18:33.27:0,33,394	0/0:7,0:7:20.05:0,20,245	0/1:11,1:12:12.49:12,0,235	0/1:12,6:18:29.67:30,0,54	0/0:15,0:15:40.68:0,41,560	0/1:6,9:14:56.52:171,0,57	0/1:7,3:10:90.23:90,0,179	0/1:10,0:9:29.41:29,0,194	0/0:10,7:17:8.98:0,9,100	0/0:9,2:10:3.01:0,3,43	0/0:8,0:8:14.83:0,15,217	0/0:16,0:16:20.51:0,21,283	0/1:22,1:23:13.44:13,0,291	0/1:17,6:22:22.45:22,0,199	0/1:20,5:25:99:254,0,310	0/1:14,5:19:83.34:219,0,83	0/1:8,2:10:66.22:66,0,124
chr10	96637675	.	GTA	G	312.91	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=5.877;DP=560;FS=1.116;HRun=0;HaplotypeScore=250.0679;InbreedingCoeff=0.2046;MQ=46.47;MQ0=12;MQRankSum=-7.518;QD=1.61;ReadPosRankSum=-2.635;VQSLOD=1.9461;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:75.17:0,75,1337	0/1:11,0:11:3.91:31,0,4	0/0:47,0:18:45.34:0,45,676	0/0:49,0:21:32:0,32,543	0/0:32,0:32:2.79:0,3,27	0/0:14,0:13:24.08:0,24,456	0/0:14,0:14:30.57:0,31,579	1/1:23,0:22:2.68:108,3,0	0/0:20,0:20:35.65:0,36,551	0/0:25,1:26:4.54:0,5,934	0/0:16,0:16:14.72:0,15,245	0/0:18,1:19:38.20:0,38,563	0/0:7,0:7:20.59:0,21,307	0/0:14,0:14:21.99:0,22,411	1/1:18,0:18:2.21:13,2,0	0/0:15,0:15:45.02:0,45,760	1/1:18,0:17:9.01:66,9,0	0/1:11,0:11:26.19:30,0,26	0/1:9,0:8:10.68:42,0,11	0/1:18,0:18:0.03:0,0,0	0/0:12,0:11:0.47:0,0,1	0/0:8,0:8:15.05:0,15,261	0/0:18,0:18:21.05:0,21,359	0/0:22,2:25:17.83:0,18,422	0/1:22,0:21:15.27:33,0,15	0/1:29,0:29:78.81:79,0,92	0/1:25,0:24:29.65:30,0,38	0/1:10,0:10:19.65:30,0,20
chr10	96637678	.	TGTGCG	T	1860.57	PASS	AB=0.980;AC=21;AF=0.375;AN=56;BaseQRankSum=7.874;DP=565;FS=2.205;HRun=0;HaplotypeScore=264.9201;InbreedingCoeff=0.2622;MQ=47.09;MQ0=12;MQRankSum=-7.944;QD=7.13;ReadPosRankSum=-0.171;VQSLOD=1.8943;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:75.04:0,75,2178	1/1:11,0:11:15.04:113,15,0	0/0:48,0:16:37.97:0,38,860	0/0:53,0:21:48.13:0,48,979	0/0:31,1:32:2.48:0,2,16	0/0:12,0:12:23.86:0,24,708	0/0:17,0:17:13.31:0,13,855	0/1:19,2:20:0.68:284,0,1	0/0:21,0:21:12.40:0,12,813	0/1:29,0:29:88.64:89,0,1476	0/0:15,0:15:11.53:0,12,222	0/0:19,0:19:36.50:0,36,835	0/1:10,0:10:6.91:7,0,450	0/0:13,0:13:16.87:0,17,738	0/1:16,1:17:4.17:35,0,4	0/0:15,0:15:41.99:0,42,1128	1/1:18,0:17:5.45:141,5,0	0/1:10,0:10:33.07:70,0,33	0/1:7,0:6:28.31:44,0,28	1/1:16,1:17:2.85:35,3,0	1/1:10,0:9:0.47:1,0,0	0/0:9,0:9:15.05:0,15,463	0/0:19,0:19:18.04:0,18,506	0/1:27,0:27:4.23:4,0,535	1/1:21,1:21:7.63:222,8,0	0/1:27,1:28:99:463,0,105	1/1:24,1:24:11.62:350,12,0	0/1:9,0:9:16.82:173,0,17
chr10	96637680	.	TGC	T	574.24	PASS	AB=0.829;AC=14;AF=0.259;AN=54;BaseQRankSum=7.279;DP=571;FS=7.295;HRun=0;HaplotypeScore=254.0979;InbreedingCoeff=-0.1603;MQ=46.87;MQ0=12;MQRankSum=-6.933;QD=2.39;ReadPosRankSum=-2.711;VQSLOD=1.3254;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:30:79.94:0,80,1371	0/1:8,2:11:15.50:37,0,16	0/0:48,0:17:37.02:0,37,530	0/0:53,1:21:30.79:0,31,484	0/0:26,4:32:2.79:0,3,36	0/0:13,1:13:26.83:0,27,459	0/0:14,3:17:8.79:0,9,533	0/1:18,2:19:63.08:67,0,63	0/0:18,4:22:23.76:0,24,548	0/1:27,2:30:19.09:19,0,962	0/0:14,1:15:8.61:0,9,149	0/0:16,2:19:35.26:0,35,541	0/0:10,0:10:11.19:0,11,336	0/0:11,2:13:9.20:0,9,443	1/1:13,4:17:2.68:47,3,0	0/0:14,0:14:42.04:0,42,740	0/1:14,4:18:47.69:106,0,48	0/1:8,2:10:34.02:34,0,62	0/1:5,1:5:17.32:21,0,17	0/1:10,8:17:0:0,0,0	./.	0/0:9,0:9:15.05:0,15,287	0/0:16,2:18:18.02:0,18,316	0/1:25,2:27:19.05:19,0,356	0/1:16,4:20:11.36:11,0,13	0/1:20,7:27:99:194,0,139	0/1:16,9:24:67.58:112,0,68	0/1:8,1:9:19.77:52,0,20
chr10	96637682	.	CG	C	697.69	PASS	AB=0.972;AC=20;AF=0.357;AN=56;BaseQRankSum=7.744;DP=582;FS=0.000;HRun=2;HaplotypeScore=254.1697;InbreedingCoeff=0.3361;MQ=45.24;MQ0=14;MQRankSum=-6.677;QD=2.89;ReadPosRankSum=0.608;VQSLOD=-0.4956;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:84.24:0,84,1224	1/1:11,0:11:12.88:73,13,0	0/0:52,0:17:20.34:0,20,505	0/0:55,1:20:48.12:0,48,578	0/1:29,3:32:0:0,0,0	0/0:14,0:13:25.72:0,26,360	0/0:17,0:17:14.97:0,15,429	0/1:21,0:19:15.29:53,0,15	0/0:22,0:22:40.57:0,41,536	0/0:30,0:30:51.25:0,51,966	0/0:15,0:15:10.41:0,10,115	0/0:19,0:19:20.34:0,20,425	0/1:11,0:11:10.68:11,0,268	0/0:13,0:13:22.48:0,22,355	0/1:16,1:17:2.70:3,0,3	0/0:15,0:15:42.02:0,42,575	0/1:19,0:18:10.92:59,0,11	1/1:11,0:11:7.98:37,8,0	1/1:7,0:5:0.05:32,0,0	1/1:13,3:17:2.67:13,3,0	1/1:7,1:9:0.89:2,1,0	0/0:9,0:9:14.83:0,15,225	0/0:18,0:18:17.50:0,18,245	0/0:23,1:26:14.61:0,15,280	0/1:21,1:21:6.98:193,0,7	0/1:29,0:29:64.72:149,0,65	0/1:24,1:24:5.21:126,0,5	1/1:7,1:8:2.28:105,2,0
chr10	96637683	.	G	GTAT	5766.18	PASS	AB=0.822;AC=26;AF=0.464;AN=56;BaseQRankSum=8.060;DP=647;FS=1.333;HRun=0;HaplotypeScore=298.6070;InbreedingCoeff=0.7157;MQ=43.81;MQ0=14;MQRankSum=-7.177;QD=17.85;ReadPosRankSum=-0.768;VQSLOD=3.7782;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:84.27:0,84,1509	1/1:4,5:10:15.36:288,15,0	0/0:55,0:17:30.82:0,31,647	0/0:56,0:20:48.13:0,48,706	0/1:14,16:31:0.07:0,0,0	0/0:15,0:15:25.41:0,25,446	0/0:21,0:21:4.81:0,5,539	1/1:15,15:30:7.31:818,7,0	0/0:22,0:22:32.85:0,33,556	0/0:30,0:30:11.24:0,11,966	0/0:15,0:15:5.23:0,5,126	0/0:19,0:19:19.50:0,19,519	0/1:11,0:11:1.59:2,0,304	0/0:14,0:14:20.30:0,20,443	1/1:12,10:23:9.60:120,10,0	0/0:14,0:14:42.02:0,42,711	1/1:9,10:20:27.60:546,28,0	1/1:9,3:13:17.11:349,17,0	1/1:14,0:13:20.70:608,21,0	1/1:25,2:26:6.08:123,6,0	1/1:16,1:16:3.45:22,3,0	0/0:10,0:10:14.45:0,14,277	0/0:18,0:18:16.83:0,17,299	0/1:26,0:26:5.23:5,0,336	0/1:11,13:23:5.47:409,0,5	1/1:22,15:38:33.04:1377,33,0	1/1:17,10:26:21.69:812,22,0	1/1:3,4:7:20.39:287,20,0
chr10	96637693	.	TGCG	T	1972.09	PASS	AB=0.838;AC=13;AF=0.232;AN=56;BaseQRankSum=7.313;DP=675;FS=1.568;HRun=0;HaplotypeScore=278.8939;InbreedingCoeff=-0.0369;MQ=38.01;MQ0=16;MQRankSum=-8.488;QD=6.85;ReadPosRankSum=-1.118;VQSLOD=2.2285;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:32:84.08:0,84,1856	0/1:6,5:11:51.67:218,0,52	0/0:48,3:13:30.03:0,30,524	0/0:49,0:12:31.96:0,32,438	0/1:26,6:30:0:0,0,0	0/0:16,0:15:12.41:0,12,444	0/0:21,0:21:47.86:0,48,740	0/1:34,5:36:99:224,0,662	0/0:22,0:22:41.54:0,42,701	0/0:28,0:29:63.52:0,64,1285	0/1:15,0:15:2.83:3,0,197	0/0:21,0:21:45.78:0,46,760	0/0:11,0:11:29.89:0,30,480	0/0:13,0:14:24.54:0,25,581	1/1:18,9:27:13.44:173,13,0	0/0:16,0:16:45.11:0,45,971	0/1:14,9:22:99:351,0,350	0/1:10,5:13:99:116,0,270	0/0:23,0:22:47.74:0,48,1057	0/0:23,2:24:2.12:0,2,21	0/1:21,2:22:4.15:4,0,130	0/0:9,0:9:11.95:0,12,280	0/0:18,0:18:14.89:0,15,337	0/0:28,0:28:31.08:0,31,423	0/1:15,9:23:94.09:149,0,94	0/1:33,10:43:99:548,0,1392	0/1:29,0:28:99:296,0,441	0/1:6,1:7:37.32:37,0,163
chr10	96637694	.	GC	G	963.64	PASS	AB=0.915;AC=11;AF=0.196;AN=56;BaseQRankSum=7.669;DP=673;FS=2.350;HRun=1;HaplotypeScore=269.9573;InbreedingCoeff=-0.0573;MQ=38.26;MQ0=16;MQRankSum=-6.125;QD=3.98;ReadPosRankSum=-0.562;VQSLOD=-0.2630;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:31:81.11:0,81,1255	0/1:9,2:11:29.65:118,0,30	0/0:49,1:13:30.02:0,30,399	0/0:48,0:12:32.88:0,33,362	0/0:23,9:30:2.76:0,3,24	0/0:16,0:15:25.30:0,25,312	0/0:21,0:21:33.54:0,34,480	0/1:42,0:39:97.51:98,0,653	0/0:22,0:22:39.28:0,39,472	0/0:29,0:29:48.53:0,49,831	0/0:16,0:16:10.59:0,11,144	0/0:21,0:21:35.26:0,35,525	0/0:11,0:11:26.29:0,26,294	0/0:14,0:14:30.20:0,30,403	1/1:21,5:26:10.94:91,11,0	0/0:16,0:16:42.14:0,42,664	0/1:20,3:22:99:149,0,246	0/1:13,2:13:53.27:53,0,196	0/0:23,0:23:12.37:0,12,818	0/0:22,2:23:2.15:0,2,21	0/1:23,0:22:3.14:3,0,86	0/0:9,0:9:11.82:0,12,190	0/0:18,0:18:14.54:0,15,240	0/0:26,1:27:24.48:0,24,293	0/1:18,6:23:49.04:49,0,75	0/1:35,7:42:99:149,0,1065	0/1:27,1:27:99:338,0,290	0/1:8,0:8:62.46:62,0,118
chr10	96637695	.	C	CGTATGT	2727.26	PASS	AB=0.894;AC=16;AF=0.286;AN=56;BaseQRankSum=9.441;DP=679;FS=3.832;HRun=0;HaplotypeScore=300.5692;InbreedingCoeff=-0.4421;MQ=38.29;MQ0=15;MQRankSum=-7.462;QD=8.63;ReadPosRankSum=-0.267;VQSLOD=2.2152;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:78.27:0,78,1895	0/1:11,0:11:21.52:22,0,84	0/0:51,0:14:26.95:0,27,400	0/0:48,0:12:26.27:0,26,334	0/0:32,0:30:2.72:0,3,21	0/1:12,3:15:51.75:52,0,325	0/1:15,3:21:99:317,0,483	0/0:42,0:39:73.11:0,73,900	0/1:12,5:21:99:304,0,351	0/1:19,7:28:99:864,0,975	0/0:12,4:17:8.29:0,8,158	0/1:17,2:21:99:181,0,496	0/1:7,5:11:99:474,0,312	0/1:12,1:14:87.63:88,0,411	0/0:26,0:26:6.88:0,7,41	0/0:16,0:16:42.08:0,42,911	0/1:24,0:23:99:106,0,245	0/1:15,0:13:76.15:76,0,189	0/0:27,0:26:27.51:0,28,753	0/0:24,0:23:2.59:0,3,15	0/0:24,0:23:8.50:0,8,114	0/1:7,2:9:27.44:27,0,278	0/1:11,5:19:25.78:26,0,302	0/1:21,5:27:88.57:89,0,257	0/0:24,0:23:8.86:0,9,115	0/1:41,0:41:54.73:55,0,1127	0/1:28,0:27:99:147,0,358	0/1:8,0:8:55.94:56,0,167
chr10	96637696	.	G	GT	1173.17	PASS	AB=0.907;AC=13;AF=0.232;AN=56;BaseQRankSum=10.077;DP=700;FS=0.461;HRun=0;HaplotypeScore=279.3959;InbreedingCoeff=-0.1753;MQ=37.95;MQ0=18;MQRankSum=-6.037;QD=3.94;ReadPosRankSum=-1.622;VQSLOD=2.7436;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:81.24:0,81,1109	0/1:10,0:11:25.37:144,0,25	0/0:51,0:12:27:0,27,317	0/0:49,0:12:30.04:0,30,334	0/0:30,1:31:2.99:0,3,40	0/0:16,0:15:16.16:0,16,251	0/0:21,0:21:28.02:0,28,432	0/1:43,2:42:99:146,0,631	0/0:21,0:21:24.06:0,24,395	0/1:28,0:28:15.30:15,0,602	0/0:17,0:17:7.54:0,8,130	0/0:20,1:21:31.73:0,32,441	0/1:12,0:11:20.74:21,0,182	0/0:13,0:14:26.07:0,26,363	1/1:29,0:29:5.55:71,6,0	0/0:16,0:16:45.11:0,45,605	0/1:24,1:24:99:142,0,227	0/1:15,0:13:52.89:53,0,211	0/0:29,1:28:25.44:0,25,841	0/0:13,11:23:2.92:0,3,21	0/1:20,6:25:38.62:39,0,75	0/0:9,0:9:11.69:0,12,166	0/0:19,0:19:13.40:0,13,205	0/0:26,2:27:10.32:0,10,213	0/1:25,0:25:63.53:77,0,64	0/1:43,1:44:99:219,0,909	0/1:16,12:27:99:337,0,266	0/1:5,4:9:61.42:61,0,113
chr10	96637722	.	G	GCGTA	1392.71	PASS	AB=0.924;AC=12;AF=0.214;AN=56;BaseQRankSum=9.218;DP=751;FS=2.907;HRun=0;HaplotypeScore=320.1552;InbreedingCoeff=-0.0838;MQ=40.84;MQ0=20;MQRankSum=-7.140;QD=4.66;ReadPosRankSum=6.623;VQSLOD=1.4457;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:99:0,138,2705	0/1:8,2:10:36.18:100,0,36	0/0:33,0:7:17.42:0,17,291	0/0:44,0:19:47.95:0,48,784	0/1:22,9:30:0.21:0,0,1	0/0:19,0:18:6.17:0,6,134	0/1:28,0:28:50.01:50,0,119	0/0:36,0:34:72.92:0,73,961	0/1:21,0:21:28.01:28,0,190	0/1:30,0:29:17.48:17,0,341	0/0:21,0:21:13.16:0,13,100	0/0:23,0:22:4.35:0,4,250	0/1:15,0:13:3.23:3,0,194	0/1:18,0:18:3.49:3,0,106	1/1:24,11:34:1.56:259,2,0	0/0:19,0:19:51.17:0,51,941	0/0:25,0:24:48.86:0,49,560	0/0:16,0:14:36.06:0,36,419	0/0:32,0:27:50.09:0,50,809	0/0:27,0:26:2.99:0,3,25	0/0:32,0:31:14.96:0,15,152	0/0:11,0:11:15.31:0,15,141	0/0:22,0:22:16.09:0,16,108	0/0:32,0:30:13.32:0,13,103	0/1:21,8:28:50.45:224,0,50	0/1:40,9:47:99:752,0,807	0/1:33,0:32:91.03:91,0,403	0/0:10,0:10:7.39:0,7,125
chr10	96637726	.	G	GCTA	3045.02	PASS	AB=0.793;AC=11;AF=0.196;AN=56;BaseQRankSum=3.546;DP=746;FS=46.583;HRun=0;HaplotypeScore=297.4971;InbreedingCoeff=-0.2458;MQ=41.20;MQ0=18;MQRankSum=-6.071;QD=12.69;ReadPosRankSum=-3.961;VQSLOD=1.4673;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:99:0,141,2513	0/0:6,0:10:9.79:0,10,121	0/0:33,0:8:18.06:0,18,309	0/0:44,0:21:54.05:0,54,934	0/0:27,0:30:2.78:0,3,23	0/1:15,3:17:75.28:248,0,75	0/1:27,1:29:99:245,0,205	0/0:29,0:27:81.02:0,81,1272	0/1:13,6:20:99:540,0,139	0/1:22,4:26:99:447,0,436	0/1:13,4:20:9.60:114,0,10	0/1:16,6:24:99:388,0,272	0/1:11,4:14:99:329,0,196	0/1:9,7:18:99:435,0,117	0/0:33,0:33:13.99:0,14,151	0/0:19,0:19:51.16:0,51,870	0/0:26,0:25:54.99:0,55,809	0/0:16,0:14:36.04:0,36,504	0/0:31,0:27:70.35:0,70,1022	0/0:27,0:27:6:0,6,80	0/0:33,0:32:21.04:0,21,329	0/1:8,2:12:95.33:189,0,95	0/1:19,3:24:99:105,0,202	0/1:25,6:29:99:151,0,242	0/0:26,0:28:21.04:0,21,247	0/0:46,0:46:99:0,135,1609	0/0:30,0:33:59.73:0,60,906	0/0:7,0:10:20.18:0,20,258
chr10	96637731	.	TGTGTGTGC	T	1582	PASS	AB=0.965;AC=24;AF=0.429;AN=56;BaseQRankSum=3.678;DP=720;FS=2.548;HRun=0;HaplotypeScore=331.3529;InbreedingCoeff=-0.4924;MQ=43.10;MQ0=15;MQRankSum=-1.996;QD=2.84;ReadPosRankSum=1.170;VQSLOD=1.3055;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,144,5204	0/0:9,0:9:1.03:0,1,122	0/0:30,0:11:32.11:0,32,684	0/0:32,0:19:53.11:0,53,1199	1/1:26,0:26:5.99:40,6,0	0/1:18,0:17:12.82:13,0,54	0/1:30,0:30:87.77:88,0,108	0/1:25,4:27:99:340,0,1081	0/1:20,0:20:28.06:28,0,147	0/1:27,0:26:11.51:12,0,541	0/0:20,0:20:6.89:0,7,63	0/1:24,0:23:80.99:81,0,255	0/1:17,0:15:23.95:24,0,252	0/1:19,0:19:29.34:29,0,167	0/1:34,0:33:12.86:136,0,13	0/0:20,0:20:56.92:0,57,1757	0/1:26,0:25:32.56:33,0,202	0/1:16,0:14:22.86:23,0,179	0/1:25,1:20:62.08:62,0,666	0/1:22,8:29:14.60:34,0,15	1/1:32,1:32:11.74:72,12,0	0/1:12,0:12:11.78:12,0,48	0/1:26,0:26:51.17:51,0,55	0/1:31,0:29:9.18:9,0,87	0/1:29,0:28:52.50:83,0,53	0/1:43,0:41:99:158,0,1090	0/1:26,6:31:99:301,0,225	0/1:7,2:9:99:114,0,176
chr10	96637735	.	TGTGC	T	2520.31	PASS	AB=0.981;AC=27;AF=0.482;AN=56;BaseQRankSum=0.572;DP=700;FS=0.844;HRun=0;HaplotypeScore=287.1375;InbreedingCoeff=-0.2877;MQ=47.20;MQ0=13;MQRankSum=-2.141;QD=4.66;ReadPosRankSum=-2.761;VQSLOD=1.6607;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,144,3242	0/0:7,0:7:1.51:0,2,36	0/0:31,0:14:41.12:0,41,576	0/0:32,0:21:54.15:0,54,775	1/1:24,0:24:5.17:40,5,0	0/1:18,0:17:4.24:41,0,4	0/1:31,0:31:23.17:147,0,23	0/1:31,0:29:99:374,0,571	0/1:21,0:21:53.22:94,0,53	0/1:25,0:24:67.03:67,0,125	0/0:17,0:17:5.89:0,6,52	0/1:23,0:22:70.18:116,0,70	0/1:18,0:16:79.15:127,0,79	0/1:17,0:17:23.35:72,0,23	0/1:36,0:35:33.93:105,0,34	0/0:20,0:20:56.77:0,57,1062	0/1:21,5:25:18.71:231,0,19	0/1:12,3:14:18.09:213,0,18	0/1:26,0:22:99:179,0,361	1/1:27,0:26:8.51:68,9,0	1/1:32,0:31:10.28:112,10,0	1/1:10,0:10:5.19:48,5,0	1/1:25,0:25:12.09:110,12,0	0/1:30,0:29:15.80:76,0,16	0/1:27,0:27:34.20:64,0,34	0/1:42,0:40:99:111,0,530	0/1:28,0:27:99:219,0,111	0/1:9,0:9:75.44:75,0,81
chr10	96638183	.	A	AT	7256.75	PASS	AB=0.600;AC=25;AF=0.446;AN=56;BaseQRankSum=-13.140;DP=573;FS=0.000;HRun=9;HaplotypeScore=62.2570;InbreedingCoeff=0.9049;MQ=75.57;MQ0=0;MQRankSum=-2.449;QD=25.73;ReadPosRankSum=0.618;VQSLOD=5.3815;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,129,1119	1/1:0,2:2:6.02:66,6,0	0/0:7,0:7:8.98:0,9,78	0/0:22,0:22:27.28:0,27,260	1/1:0,13:13:33.01:338,33,0	0/0:14,0:14:35.96:0,36,309	0/0:32,0:32:83.98:0,84,729	1/1:6,12:18:13.03:361,13,0	0/0:18,0:18:53.96:0,54,460	0/0:20,0:20:50.96:0,51,436	0/0:7,0:7:14.99:0,15,130	0/0:16,0:16:38.98:0,39,339	0/0:17,0:17:44.94:0,45,384	0/0:19,0:19:50.99:0,51,442	1/1:4,24:28:69.13:749,69,0	0/0:24,0:24:59.91:0,60,508	1/1:4,40:46:99:1256,117,0	1/1:3,37:40:99:1127,102,0	1/1:5,16:21:48.11:521,48,0	1/1:0,7:7:18.05:196,18,0	1/1:5,37:43:99:1109,102,0	0/0:7,0:7:21:0,21,182	0/0:6,0:6:17.98:0,18,153	0/0:31,0:34:93.05:0,93,766	0/1:3,6:9:8.01:148,0,8	1/1:4,21:25:69.06:735,69,0	1/1:5,14:19:18.84:418,19,0	1/1:2,8:10:21.06:232,21,0
chr10	96638433	.	CT	C	3011.97	PASS	AC=24;AF=0.444;AN=54;BaseQRankSum=4.753;DP=295;FS=3.408;HRun=6;HaplotypeScore=48.5089;InbreedingCoeff=0.9447;MQ=75.82;MQ0=1;MQRankSum=-4.080;QD=21.67;ReadPosRankSum=1.943;VQSLOD=2.8908;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:39.06:0,39,477	1/1:0,8:8:8.97:83,9,0	0/0:6,0:5:8.99:0,9,86	0/0:18,0:15:16.47:0,16,161	1/1:0,10:10:29.92:273,30,0	0/0:14,0:14:39.03:0,39,461	0/0:8,0:8:9.01:0,9,103	1/1:1,19:19:54.09:551,54,0	0/0:3,0:3:9.01:0,9,103	0/0:12,0:12:33.10:0,33,411	0/0:12,0:11:27.09:0,27,355	0/0:10,0:10:15.04:0,15,182	0/0:15,0:15:33.05:0,33,370	0/0:7,0:7:18.05:0,18,222	1/1:2,3:5:9.02:97,9,0	0/0:9,0:9:27.06:0,27,326	1/1:2,16:18:39.10:418,39,0	1/1:1,20:21:36.09:383,36,0	1/1:3,11:14:33.05:337,33,0	1/1:1,6:7:17.94:158,18,0	./.	0/0:8,0:8:21.04:0,21,246	0/0:11,0:11:26.87:0,27,295	0/0:6,0:6:15.01:0,15,152	1/1:1,10:11:30.07:318,30,0	1/1:2,7:9:21.05:225,21,0	1/1:1,7:8:14.40:136,14,0	1/1:0,8:8:24.06:252,24,0
chr10	96640006	.	GTCT	G	2162.21	PASS	AB=0.719;AC=18;AF=0.321;AN=56;BaseQRankSum=13.578;DP=495;FS=6.908;HRun=0;HaplotypeScore=194.6361;InbreedingCoeff=-0.4936;MQ=86.73;MQ0=0;MQRankSum=-11.549;QD=7.23;ReadPosRankSum=5.598;VQSLOD=1.9371;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,2723	0/1:6,5:11:99:141,0,154	0/0:22,0:22:66.23:0,66,1543	0/0:21,0:21:63.05:0,63,1430	0/0:11,4:15:16.98:0,17,378	0/1:10,10:20:99:232,0,330	0/1:14,5:19:82.53:83,0,548	0/0:18,0:18:13.60:0,14,574	0/1:8,12:20:99:245,0,321	0/1:11,7:18:99:157,0,430	0/0:12,4:16:13.35:0,13,518	0/1:5,15:20:99:302,0,196	0/1:3,10:13:69.14:225,0,69	0/1:4,7:18:59.14:165,0,59	0/1:8,7:15:99:146,0,297	0/0:18,0:18:54.19:0,54,1306	0/1:15,4:19:27.85:28,0,537	0/1:11,3:14:51.10:51,0,386	0/1:16,6:22:99:139,0,510	0/1:10,8:18:81.78:82,0,457	0/0:24,1:25:12.06:0,12,556	0/0:8,5:13:15.94:0,16,514	0/0:6,3:9:1.49:0,1,365	0/1:14,3:17:23.06:23,0,351	0/1:11,7:18:99:129,0,399	0/1:13,2:15:14.36:14,0,406	0/1:8,9:17:99:146,0,300	0/1:4,1:5:12.39:12,0,188
chr10	96640010	.	GGTGGCCTATAAGCT	G	11170.80	PASS	AB=0.725;AC=21;AF=0.375;AN=56;BaseQRankSum=15.758;DP=480;FS=11.687;HRun=0;HaplotypeScore=261.1586;InbreedingCoeff=-0.5993;MQ=88.16;MQ0=0;MQRankSum=-12.866;QD=34.80;ReadPosRankSum=11.451;VQSLOD=1.5755;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,134,7116	0/1:5,5:10:70.52:506,0,71	0/0:23,0:23:69.20:0,69,2181	0/0:21,0:21:63.13:0,63,2099	0/0:11,4:15:29.81:0,30,296	0/1:8,10:18:99:981,0,138	0/1:13,5:18:99:467,0,289	0/0:14,0:14:42.08:0,42,436	0/1:8,12:20:99:1207,0,132	0/1:10,7:17:99:682,0,154	0/1:12,3:15:53.94:54,0,317	0/1:5,15:20:91.14:1444,0,91	0/1:2,10:12:20.40:993,0,20	0/1:11,7:18:75.33:776,0,75	0/1:8,7:15:99:678,0,215	0/0:17,0:17:51.18:0,51,2939	0/1:14,4:18:99:162,0,351	0/1:10,3:13:99:317,0,217	0/1:15,6:21:99:571,0,328	0/1:9,8:17:99:467,0,281	0/0:23,1:24:24.06:0,24,363	0/1:8,5:13:64.36:64,0,260	0/1:6,3:9:77.39:77,0,182	0/1:12,3:15:99:176,0,146	0/1:9,7:16:99:608,0,221	0/1:13,2:15:99:168,0,266	0/1:7,9:16:99:683,0,217	0/1:4,1:5:89.22:89,0,128
chr10	96640438	.	TATATATATAC	T	2322.54	PASS	AB=1.000;AC=29;AF=0.630;AN=46;BaseQRankSum=0.522;DP=190;FS=7.359;HRun=0;HaplotypeScore=73.1104;InbreedingCoeff=0.2215;MQ=59.06;MQ0=1;MQRankSum=-2.475;QD=14.61;ReadPosRankSum=-2.893;VQSLOD=0.3120;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:3,0:3:3.85:7,0,4	0/0:2,0:2:6.02:0,6,71	0/0:1,0:1:2.74:0,3,12	0/0:9,0:3:2.75:0,3,37	0/0:3,0:3:5.99:0,6,49	1/1:12,0:12:2.64:14,3,0	1/1:2,0:2:2.99:24,3,0	1/1:8,31:39:86.80:948,87,0	1/1:2,0:2:2.50:9,2,0	1/1:2,0:2:2.96:19,3,0	./.	0/1:8,0:8:12.01:14,0,12	1/1:4,0:4:2.50:9,2,0	1/1:3,0:3:2.37:8,2,0	0/0:2,0:2:5.98:0,6,47	./.	0/1:26,0:26:12.52:13,0,1665	0/1:22,0:22:17.79:18,0,1148	1/1:1,13:14:32.90:486,33,0	./.	1/1:1,0:1:2.97:20,3,0	1/1:3,0:3:2.37:8,2,0	./.	./.	0/0:5,0:5:5.99:0,6,54	0/1:2,0:2:16.96:17,0,21	1/1:2,5:7:15.05:397,15,0	1/1:2,7:8:15.05:452,15,0
chr10	96640442	.	TATATAC	T	2808.72	PASS	AB=1.000;AC=40;AF=0.870;AN=46;BaseQRankSum=1.247;DP=188;FS=0.000;HRun=0;HaplotypeScore=62.6714;InbreedingCoeff=0.1183;MQ=56.44;MQ0=1;MQRankSum=-4.204;QD=16.33;ReadPosRankSum=-3.588;VQSLOD=1.3078;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:5.64:26,6,0	1/1:2,0:2:5.65:28,6,0	0/0:1,0:1:2.50:0,2,9	0/0:8,0:2:2.80:0,3,37	1/1:3,1:4:6:60,6,0	1/1:1,11:12:15.05:313,15,0	1/1:2,0:2:2.99:24,3,0	1/1:35,0:35:87.94:749,88,0	1/1:0,3:3:3.01:68,3,0	1/1:2,0:2:5.91:38,6,0	./.	1/1:0,8:8:12.04:244,12,0	1/1:1,3:4:3.01:68,3,0	1/1:1,2:3:3.01:69,3,0	1/1:2,0:2:5.98:47,6,0	./.	0/1:27,0:27:99:163,0,803	0/1:23,0:24:91.20:91,0,465	1/1:14,0:14:32.88:320,33,0	./.	1/1:1,0:1:2.97:20,3,0	1/1:0,3:3:3.01:69,3,0	./.	./.	1/1:5,0:5:5.92:42,6,0	1/1:2,0:2:5.96:43,6,0	1/1:7,0:7:15:205,15,0	1/1:9,0:8:15.05:234,15,0
chr10	96640444	.	TATAC	T	2631.54	PASS	AB=0.982;AC=40;AF=0.870;AN=46;BaseQRankSum=0.847;DP=186;FS=0.000;HRun=0;HaplotypeScore=55.5754;InbreedingCoeff=0.1276;MQ=56.09;MQ0=1;MQRankSum=-3.274;QD=15.39;ReadPosRankSum=-3.239;VQSLOD=2.4539;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:5.64:26,6,0	1/1:0,2:2:6.02:112,6,0	0/0:1,0:1:2.60:0,3,10	0/0:8,0:2:2.80:0,3,37	1/1:1,4:5:5.93:74,6,0	1/1:11,0:11:15.05:185,15,0	1/1:2,0:2:2.99:24,3,0	1/1:32,0:32:90.33:700,90,0	1/1:3,0:3:3.01:35,3,0	1/1:3,0:3:8.87:57,9,0	./.	1/1:8,0:8:11.97:124,12,0	1/1:4,0:4:3.01:35,3,0	1/1:3,0:3:3.01:35,3,0	1/1:0,2:2:6.02:113,6,0	./.	0/1:26,1:27:99:219,0,439	0/1:25,0:25:99:167,0,216	1/1:14,0:14:32.88:278,33,0	./.	1/1:1,0:1:2.97:20,3,0	1/1:3,0:3:3.01:35,3,0	./.	./.	1/1:0,5:5:6.02:113,6,0	1/1:0,2:2:6:79,6,0	1/1:7,0:7:14.97:148,15,0	1/1:9,0:8:15.04:164,15,0
chr10	96640446	.	TAC	T	2089.43	PASS	AB=0.962;AC=40;AF=0.870;AN=46;BaseQRankSum=1.385;DP=187;FS=4.966;HRun=0;HaplotypeScore=52.3938;InbreedingCoeff=0.1418;MQ=55.91;MQ0=1;MQRankSum=-2.538;QD=12.36;ReadPosRankSum=-3.300;VQSLOD=2.3404;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:8.44:40,8,0	1/1:2,0:2:5.98:47,6,0	0/0:1,0:1:2.68:0,3,11	0/0:8,0:2:2.80:0,3,36	1/1:5,0:5:5.92:41,6,0	1/1:11,0:11:14.83:99,15,0	1/1:2,0:2:2.99:24,3,0	1/1:31,0:31:90.38:645,90,0	1/1:3,0:3:2.98:21,3,0	1/1:3,0:3:8.87:57,9,0	./.	1/1:8,0:8:11.87:82,12,0	1/1:3,0:3:2.98:21,3,0	1/1:3,0:3:2.98:21,3,0	1/1:2,0:2:5.99:47,6,0	./.	0/1:28,0:28:72.67:224,0,73	0/1:22,2:24:10.30:275,0,10	1/1:13,0:13:32.72:236,33,0	./.	1/1:1,0:1:2.97:20,3,0	1/1:3,0:3:2.98:21,3,0	./.	./.	1/1:5,0:5:5.98:47,6,0	1/1:2,0:2:5.98:46,6,0	1/1:7,0:7:14.74:92,15,0	1/1:9,0:8:14.77:94,15,0
chr10	96640778	.	GGTAGTGC	G	17896.74	PASS	AC=46;AF=0.852;AN=54;BaseQRankSum=9.844;DP=478;FS=4.487;HRun=0;HaplotypeScore=137.7677;InbreedingCoeff=0.9513;MQ=78.34;MQ0=0;MQRankSum=-12.663;QD=45.89;ReadPosRankSum=3.747;VQSLOD=4.7294;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,3884	./.	0/0:16,0:16:36.12:0,36,1082	0/0:18,0:18:42.14:0,42,1229	1/1:0,12:12:21.05:520,21,0	1/1:3,9:12:24.08:595,24,0	1/1:3,19:22:51.18:1263,51,0	1/1:6,17:23:30.09:659,30,0	1/1:5,15:20:36.12:892,36,0	1/1:4,12:16:33.11:818,33,0	1/1:0,6:6:15.05:371,15,0	1/1:2,19:21:51.18:1263,51,0	1/1:4,12:16:33.11:818,33,0	1/1:6,16:22:54.19:1336,54,0	1/1:5,21:26:51.18:1263,51,0	0/0:17,0:17:42.14:0,42,1630	1/1:9,11:20:30.10:743,30,0	1/1:5,11:16:33.11:818,33,0	1/1:3,10:13:27.09:669,27,0	1/1:0,9:9:27.09:669,27,0	1/1:23,25:48:33.58:808,34,0	1/1:1,9:10:27.09:669,27,0	1/1:2,8:10:27.09:668,27,0	1/1:3,11:14:6.02:149,6,0	1/1:1,6:7:12.04:297,12,0	1/1:2,18:20:51.17:1197,51,0	1/1:3,17:20:42.14:1040,42,0	1/1:0,7:7:15.05:372,15,0
chr10	96640930	.	C	CA	2487.94	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.188;DP=594;FS=0.371;HRun=0;HaplotypeScore=231.0850;InbreedingCoeff=0.9970;MQ=88.45;MQ0=0;MQRankSum=-15.285;QD=17.52;ReadPosRankSum=2.226;VQSLOD=3.6200;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,1720	0/0:9,0:9:24.06:0,24,317	0/0:25,0:24:72.22:0,72,947	0/0:29,0:29:75.19:0,75,971	0/0:22,0:22:63.20:0,63,860	1/1:12,0:12:32.59:265,33,0	1/1:17,5:22:47.26:307,47,0	0/0:42,0:42:99:0,114,1569	1/1:11,1:12:35.37:256,35,0	1/1:13,0:13:37.17:276,37,0	1/1:9,0:9:23.71:213,24,0	1/1:17,0:17:50.23:413,50,0	1/1:6,1:7:17.58:145,18,0	1/1:13,0:13:38.06:264,38,0	0/0:26,0:26:72.23:0,72,990	0/0:22,0:22:66.21:0,66,903	0/0:33,0:33:90.30:0,90,1254	0/0:21,0:21:60.17:0,60,818	0/0:20,0:20:57.19:0,57,795	0/0:30,0:30:90.22:0,90,1182	0/0:59,0:59:99:0,162,2167	1/1:12,0:12:29.30:219,29,0	1/1:8,1:9:25.47:223,25,0	1/1:16,0:15:20.50:133,20,0	0/0:12,0:12:33.11:0,33,460	0/0:25,0:25:66.21:0,66,909	0/0:22,0:22:66.22:0,66,921	0/0:12,0:12:36.12:0,36,503
chr10	96641384	.	GGTCA	G	9134.28	PASS	AB=0.529;AC=21;AF=0.375;AN=56;BaseQRankSum=14.844;DP=591;FS=3.482;HRun=0;HaplotypeScore=102.4456;InbreedingCoeff=0.9500;MQ=87.76;MQ0=1;MQRankSum=-4.479;QD=38.87;ReadPosRankSum=2.382;VQSLOD=5.2131;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.28:0,81,2039	1/1:1,4:5:15.05:257,15,0	0/0:24,0:24:48.14:0,48,1099	0/0:22,0:21:48.06:0,48,1083	1/1:6,16:22:48.05:808,48,0	0/0:22,0:22:51.18:0,51,1280	0/0:19,0:19:39.13:0,39,970	1/1:7,13:20:36.12:618,36,0	0/0:19,0:19:42.14:0,42,1058	0/0:40,0:40:99:0,111,2771	0/0:23,0:23:36.12:0,36,896	0/0:4,0:4:9.03:0,9,227	0/0:12,0:12:33.11:0,33,797	0/0:15,0:15:42.14:0,42,1023	1/1:1,17:17:42.14:721,42,0	0/0:35,0:35:96.33:0,96,2417	0/0:26,0:26:69.24:0,69,1737	0/0:17,0:17:36.12:0,36,907	1/1:6,20:26:60.20:1017,60,0	1/1:7,17:24:45.15:773,45,0	1/1:3,23:26:60.21:1030,60,0	0/0:16,0:16:42.14:0,42,998	0/0:16,0:16:42.13:0,42,1000	0/0:17,0:17:48.16:0,48,1177	1/1:2,19:21:45.15:772,45,0	0/1:3,24:27:0.34:1131,0,0	1/1:2,24:26:66.23:1131,66,0	1/1:0,20:20:51.17:876,51,0
chr10	96642025	.	TACAC	T	17581.83	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=11.263;DP=780;FS=7.267;HRun=0;HaplotypeScore=223.9513;InbreedingCoeff=0.9708;MQ=56.86;MQ0=5;MQRankSum=-4.252;QD=28.27;ReadPosRankSum=1.399;VQSLOD=3.4279;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,1:60:99:0,159,3839	1/1:0,8:8:24.08:412,24,0	0/0:34,0:21:37.54:0,38,641	0/0:31,0:23:36.90:0,37,871	1/1:4,21:25:25.91:462,26,0	1/1:2,19:21:45.15:772,45,0	1/1:8,26:35:6.47:464,6,0	1/1:10,14:24:42.13:682,42,0	1/1:6,24:30:63.21:1066,63,0	1/1:6,24:30:69.20:1120,69,0	1/1:4,15:20:30.10:515,30,0	1/1:8,24:32:54.18:927,54,0	1/1:3,23:26:54.18:926,54,0	1/1:3,29:32:66.23:1124,66,0	1/1:6,27:34:57.19:954,57,0	0/0:31,1:33:35.57:0,36,1938	1/1:6,23:29:45.15:772,45,0	1/1:2,21:23:42.14:721,42,0	1/1:8,11:19:30.10:493,30,0	1/1:3,16:19:39.13:667,39,0	1/1:10,43:53:65.98:1133,66,0	1/1:10,20:31:38.14:643,38,0	1/1:3,18:21:27.09:464,27,0	1/1:12,20:32:29.62:515,30,0	1/1:3,21:24:51.17:875,51,0	1/1:4,18:22:54.17:895,54,0	1/1:3,16:19:36.12:618,36,0	1/1:3,10:13:21.07:360,21,0
chr10	96642566	.	GGTGTGTGTGTGTGT	G	9944.39	PASS	AB=0.829;AC=42;AF=0.778;AN=54;BaseQRankSum=9.519;DP=507;FS=3.232;HRun=0;HaplotypeScore=200.7185;InbreedingCoeff=0.4665;MQ=65.13;MQ0=14;MQRankSum=-6.814;QD=26.88;ReadPosRankSum=2.036;VQSLOD=4.1666;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:84.27:0,84,4185	0/1:6,0:6:0:0,0,0	0/0:39,0:21:6.02:0,6,168	0/0:30,0:20:9.03:0,9,332	1/1:9,0:12:9.03:292,9,0	0/1:14,11:25:9.84:878,0,10	0/1:15,5:20:9.83:343,0,10	1/1:11,0:14:6.38:52,6,0	1/1:9,7:16:12.04:472,12,0	1/1:3,6:9:15.05:393,15,0	1/1:5,8:13:9.02:354,9,0	1/1:7,11:18:27.09:1063,27,0	1/1:10,0:10:6.02:102,6,0	1/1:4,10:15:24.08:924,24,0	1/1:4,0:16:27.09:868,27,0	0/0:12,0:15:33.11:0,33,1885	1/1:11,0:16:12.04:391,12,0	0/1:11,0:14:91.72:92,0,111	1/1:14,0:19:5.99:120,6,0	1/1:8,0:18:24.08:782,24,0	1/1:22,0:26:3.01:85,3,0	1/1:7,2:9:6.49:236,6,0	1/1:8,1:10:6.02:216,6,0	1/1:18,6:24:6.02:236,6,0	1/1:7,0:15:21.07:682,21,0	1/1:12,0:20:20.10:593,20,0	1/1:13,0:22:24.08:770,24,0	./.
chr10	96642800	.	A	AG	13114.33	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=5.085;DP=521;FS=0.488;HRun=7;HaplotypeScore=74.7989;InbreedingCoeff=0.9742;MQ=75.63;MQ0=0;MQRankSum=-6.014;QD=29.67;ReadPosRankSum=1.931;VQSLOD=5.3617;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.09:0,78,741	1/1:1,4:5:12.04:145,12,0	0/0:16,0:16:41.40:0,41,375	0/0:12,0:12:36:0,36,332	1/1:3,22:25:66.14:777,66,0	1/1:2,17:19:51.09:598,51,0	1/1:3,13:16:39.12:471,39,0	1/1:7,24:31:63.62:735,64,0	1/1:3,12:15:36.06:414,36,0	1/1:6,20:26:60.18:722,60,0	1/1:2,15:17:36.06:416,36,0	1/1:1,17:18:48.08:561,48,0	1/1:1,18:19:54.17:652,54,0	1/1:0,15:15:42.13:505,42,0	1/1:1,24:25:60.18:725,60,0	0/0:23,0:23:60.07:0,60,569	1/1:2,14:16:10.15:406,10,0	1/1:2,22:24:63.19:759,63,0	1/1:1,10:11:30.09:362,30,0	1/1:4,19:23:54.17:650,54,0	1/1:2,16:18:51.13:602,51,0	1/1:0,14:14:42.04:484,42,0	1/1:2,14:16:36.11:434,36,0	1/1:2,5:7:15.05:181,15,0	1/1:2,14:16:39.12:466,39,0	1/1:3,21:25:75.04:854,75,0	1/1:3,25:28:63.19:761,63,0	1/1:0,13:13:36.11:435,36,0
chr10	96644124	.	TGTG	T	3775.01	PASS	AB=0.996;AC=30;AF=0.536;AN=56;BaseQRankSum=2.740;DP=338;FS=1.690;HRun=0;HaplotypeScore=71.4932;InbreedingCoeff=0.4919;MQ=66.69;MQ0=7;MQRankSum=-2.048;QD=15.80;ReadPosRankSum=6.432;VQSLOD=2.9138;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:39.10:0,39,425	0/0:7,0:7:20.91:0,21,174	0/0:19,0:17:41.60:0,42,645	0/0:9,0:8:18.91:0,19,200	0/0:15,0:12:32.85:0,33,268	1/1:6,0:6:14.72:89,15,0	1/1:6,0:6:14.80:101,15,0	0/1:26,0:26:58.91:273,0,59	1/1:7,0:7:17.76:120,18,0	1/1:15,0:15:11.71:197,12,0	0/1:9,0:9:7.16:77,0,7	1/1:8,0:8:17.71:113,18,0	0/1:5,0:5:10.16:56,0,10	0/1:5,0:5:6.09:49,0,6	0/0:8,1:8:20.88:0,21,155	0/0:10,0:10:21.06:0,21,229	1/1:2,14:15:27.09:473,27,0	1/1:1,24:25:54.18:946,54,0	0/1:19,0:15:16.56:145,0,17	1/1:9,0:9:7.65:131,8,0	0/1:18,0:18:68.32:147,0,68	1/1:6,0:6:11.82:78,12,0	1/1:13,0:13:15.73:199,16,0	0/1:12,0:12:0.30:103,0,0	0/0:8,0:8:23.89:0,24,183	0/0:6,0:6:17.91:0,18,137	0/1:18,0:18:0.42:196,0,0	1/1:15,0:15:44.35:283,44,0
chr10	96644126	.	TGGG	T	6815.66	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-8.837;DP=334;FS=11.038;HRun=9;HaplotypeScore=61.2615;InbreedingCoeff=0.9163;MQ=67.17;MQ0=7;MQRankSum=-1.948;QD=27.82;ReadPosRankSum=3.296;VQSLOD=2.0889;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:39.13:0,39,515	0/0:2,0:7:17.93:0,18,138	0/0:20,0:18:35.59:0,36,656	0/1:9,0:8:1.43:1,0,174	0/0:5,0:11:26.91:0,27,211	1/1:0,6:6:15.05:213,15,0	1/1:0,5:5:15.05:213,15,0	1/1:7,20:26:57.18:791,57,0	1/1:0,7:7:18.06:255,18,0	1/1:1,14:15:42.13:578,42,0	1/1:1,8:9:15.05:213,15,0	1/1:0,8:8:18.06:255,18,0	1/1:1,4:5:12.04:170,12,0	1/1:0,5:5:9.03:128,9,0	0/0:1,0:8:20.92:0,21,163	0/0:9,0:9:21.07:0,21,277	1/1:15,0:15:27.01:239,27,0	1/1:24,0:24:54.02:481,54,0	1/1:4,14:15:30.10:425,30,0	1/1:0,10:10:24.07:341,24,0	1/1:5,13:18:33.10:468,33,0	1/1:0,6:6:12.04:170,12,0	1/1:1,12:13:30.10:425,30,0	1/1:1,11:12:21.07:298,21,0	0/0:2,0:9:17.93:0,18,140	0/0:0,0:6:17.94:0,18,144	1/1:2,14:16:36.12:511,36,0	1/1:0,15:15:45.15:639,45,0
chr10	96644127	.	G	GT	749.25	PASS	AB=0.988;AC=7;AF=0.125;AN=56;BaseQRankSum=-6.573;DP=332;FS=7.741;HRun=1;HaplotypeScore=70.2060;InbreedingCoeff=0.6682;MQ=67.30;MQ0=7;MQRankSum=2.342;QD=8.23;ReadPosRankSum=-0.399;VQSLOD=0.3418;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:39.13:557,39,0	0/0:7,0:7:18.98:0,19,100	0/0:20,0:18:44.88:0,45,478	0/0:9,0:8:13.25:0,13,126	0/0:12,2:11:29.77:0,30,156	0/0:6,0:6:14.62:0,15,85	0/0:5,0:5:14.54:0,15,81	0/1:26,1:26:15.75:16,0,289	0/0:7,0:7:17.55:0,18,101	0/0:15,0:15:43.96:0,44,271	0/0:9,0:9:17.62:0,18,110	0/0:8,0:8:17.53:0,18,101	0/0:5,0:5:14.70:0,15,94	0/0:5,0:5:11.71:0,12,69	0/0:9,0:8:18.17:0,18,70	1/1:0,9:9:21.07:300,21,0	0/1:15,0:14:0.04:3,0,0	0/1:24,0:24:0:7,0,0	0/0:17,1:14:15.73:0,16,163	0/0:10,0:10:26.36:0,26,155	0/0:18,0:18:47.13:0,47,308	0/0:6,0:6:11.67:0,12,67	0/0:13,0:13:32.11:0,32,185	0/0:11,0:11:20.47:0,20,119	0/0:9,0:9:21.58:0,22,112	0/0:6,0:6:15.82:0,16,64	0/0:16,0:16:38.05:0,38,221	0/0:15,0:15:43.87:0,44,253
chr10	96646182	.	T	TA	1670.41	PASS	AB=0.972;AC=13;AF=0.241;AN=54;BaseQRankSum=-3.794;DP=329;FS=2.751;HRun=9;HaplotypeScore=45.2631;InbreedingCoeff=0.6628;MQ=79.63;MQ0=0;MQRankSum=1.065;QD=15.76;ReadPosRankSum=-0.247;VQSLOD=3.3830;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:38.98:0,39,338	1/1:3,5:8:12.03:133,12,0	0/1:14,0:12:8.63:9,0,51	0/0:12,0:12:1:0,1,83	1/1:6,15:21:22.07:469,22,0	0/0:9,0:9:26.99:0,27,234	0/0:7,0:7:11.99:0,12,104	0/0:13,0:13:32.98:0,33,286	0/0:8,0:8:14.99:0,15,130	0/0:15,0:15:38.98:0,39,339	0/0:18,0:18:44.98:0,45,390	./.	0/0:10,0:10:26.99:0,27,234	0/0:7,0:7:21:0,21,182	1/1:0,9:9:27.07:299,27,0	0/0:5,0:5:11.99:0,12,104	0/0:18,0:18:38.98:0,39,338	0/0:27,0:27:62.97:0,63,547	0/1:9,1:11:4.17:4,0,182	0/0:13,0:13:29.99:0,30,260	0/0:6,0:6:18:0,18,156	0/0:4,0:4:12:0,12,104	0/0:13,0:13:32.99:0,33,286	0/0:13,0:13:32.99:0,33,286	1/1:4,11:15:33.09:365,33,0	1/1:4,16:20:28.10:537,28,0	0/1:8,0:8:30.56:31,0,132	0/0:7,0:7:17.99:0,18,156
chr10	96646221	.	GCA	G	440.06	PASS	AB=0.851;AC=32;AF=0.667;AN=48;BaseQRankSum=4.055;DP=317;FS=3.969;HRun=0;HaplotypeScore=54.5790;InbreedingCoeff=0.2083;MQ=54.48;MQ0=8;MQRankSum=-0.989;QD=2.15;ReadPosRankSum=-0.214;VQSLOD=0.7889;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:25:11.36:56,11,0	1/1:3,0:4:2.84:14,3,0	./.	./.	1/1:15,0:18:3.31:15,3,0	0/1:10,2:12:20.94:24,0,21	0/1:7,1:8:23.21:23,0,74	./.	0/1:6,2:8:20.18:20,0,120	1/1:11,0:13:3.31:15,3,0	1/1:6,1:10:8.69:60,9,0	0/0:3,0:3:3.01:0,3,44	0/1:5,1:6:23.23:23,0,54	0/0:8,0:9:0.39:0,0,203	1/1:4,0:6:8.67:52,9,0	1/1:5,0:6:2.84:14,3,0	1/1:9,0:10:2.84:14,3,0	1/1:17,0:21:2.73:14,3,0	1/1:10,3:13:3:32,3,0	1/1:13,1:13:7.83:70,8,0	1/1:8,3:10:6.01:64,6,0	0/0:10,0:9:9.03:0,9,133	0/0:6,0:6:3.01:0,3,41	0/0:12,0:17:9:0,9,77	./.	1/1:14,0:16:8.52:42,9,0	0/0:8,0:8:6.02:0,6,88	1/1:3,0:3:3.01:32,3,0
chr10	96646322	.	ATCTTTC	A	1796.84	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=1.447;DP=409;FS=2.857;HRun=0;HaplotypeScore=100.5760;InbreedingCoeff=0.9201;MQ=66.67;MQ0=4;MQRankSum=0.376;QD=13.82;ReadPosRankSum=3.202;VQSLOD=2.7245;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:21.70:0,22,292	0/0:7,0:7:12.90:0,13,112	0/0:31,0:20:48.51:0,49,501	0/0:31,0:18:32.53:0,33,437	0/0:19,0:19:10.81:0,11,333	1/1:10,0:10:23.84:181,24,0	1/1:13,0:13:12.29:214,12,0	0/0:21,0:21:53.07:0,53,446	1/1:13,0:13:20.86:205,21,0	1/1:14,0:13:36.05:344,36,0	1/1:14,0:14:23.34:181,23,0	1/1:6,0:6:8.92:65,9,0	1/1:13,0:13:35.67:263,36,0	1/1:7,1:8:11.98:99,12,0	0/0:7,0:7:19.67:0,20,157	0/0:11,0:11:7.44:0,7,196	0/0:15,0:15:38.97:0,39,671	0/0:15,0:15:24.84:0,25,659	0/0:12,0:12:32.96:0,33,284	0/0:14,0:14:35.96:0,36,338	0/0:14,0:14:12.80:0,13,344	1/1:5,0:5:8.99:75,9,0	1/1:0,9:9:2.88:70,3,0	1/1:25,0:23:35.62:316,36,0	0/0:16,0:16:20.46:0,20,319	0/0:20,0:20:28.24:0,28,429	0/0:10,0:10:26.89:0,27,439	0/0:19,0:19:44:0,44,429
chr10	96646326	.	TTCTCTCTC	T	366.87	PASS	AB=0.957;AC=15;AF=0.326;AN=46;BaseQRankSum=3.682;DP=425;FS=0.000;HRun=0;HaplotypeScore=121.5160;InbreedingCoeff=0.3131;MQ=64.28;MQ0=9;MQRankSum=-2.763;QD=2.84;ReadPosRankSum=0.123;VQSLOD=2.0101;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:17:3.01:56,3,0	1/1:7,0:7:3:32,3,0	./.	./.	0/1:15,2:17:6.65:149,0,7	./.	0/1:12,0:12:41.54:42,0,63	0/0:25,0:21:8.22:0,8,73	1/1:13,0:13:2.37:8,2,0	0/0:16,0:15:12.03:0,12,99	./.	0/0:6,0:6:3.01:0,3,43	0/0:13,0:13:0.47:0,0,1	0/1:7,0:7:0:0,0,0	./.	1/1:9,0:10:3.01:56,3,0	0/0:15,0:16:15.05:0,15,556	0/0:24,0:24:33.11:0,33,927	0/0:14,0:14:6.02:0,6,154	0/0:16,0:16:9.03:0,9,244	0/0:16,0:15:8.90:0,9,321	0/0:5,0:5:3.01:0,3,43	1/1:9,0:9:2.24:8,2,0	0/0:25,0:23:5.61:0,6,67	0/1:14,2:15:12.85:132,0,13	0/1:21,0:21:0.02:13,0,0	0/0:10,0:10:15.05:0,15,437	0/0:19,0:19:14.26:0,14,295
chr10	96646654	.	ACT	A	9985.89	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-1.918;DP=617;FS=0.980;HRun=0;HaplotypeScore=91.9331;InbreedingCoeff=0.9988;MQ=86.26;MQ0=2;MQRankSum=-2.606;QD=36.85;ReadPosRankSum=3.828;VQSLOD=7.2620;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,99,1775	0/0:14,0:14:42.11:0,42,543	0/0:28,0:28:78.09:0,78,1261	0/0:17,0:17:45.12:0,45,720	0/0:25,0:25:72.23:0,72,925	1/1:0,15:15:45.15:630,45,0	1/1:1,29:30:72.24:1002,72,0	0/0:32,0:32:87.05:0,87,1075	1/1:0,19:19:57.19:798,57,0	1/1:0,26:26:78.26:1092,78,0	1/1:0,26:26:72.24:1008,72,0	1/1:0,19:19:54.18:756,54,0	1/1:1,16:16:39.13:546,39,0	1/1:2,24:26:69.23:961,69,0	0/0:32,0:32:96.31:0,96,1285	0/0:16,0:15:45.15:0,45,809	1/1:1,19:20:54.18:756,54,0	1/1:0,14:14:42.07:546,42,0	0/0:19,0:19:54.19:0,54,965	0/0:31,0:31:93.32:0,93,1636	0/0:18,0:18:51.17:0,51,918	1/1:4,16:20:45.15:630,45,0	1/1:0,18:18:51.17:714,51,0	1/1:1,20:20:39.13:546,39,0	0/0:17,0:17:51.16:0,51,649	0/0:20,1:21:18.18:0,18,719	0/0:28,0:28:84.25:0,84,1475	0/0:10,0:10:30.10:0,30,415
chr10	96647048	.	A	ACTCT	615.59	PASS	AB=1.000;AC=22;AF=0.440;AN=50;BaseQRankSum=-1.595;DP=558;FS=5.859;HRun=0;HaplotypeScore=116.0381;InbreedingCoeff=0.3421;MQ=64.05;MQ0=16;MQRankSum=-0.313;QD=2.22;ReadPosRankSum=-3.794;VQSLOD=0.7800;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:0.47:0,0,1	0/0:10,0:12:3:0,3,28	./.	./.	0/0:19,0:21:2.92:0,3,22	0/1:34,0:34:17.37:17,0,40	1/1:11,0:12:2.74:12,3,0	1/1:41,0:39:2.66:6,3,0	1/1:10,3:14:11.78:220,12,0	1/1:13,0:13:4.26:42,4,0	0/1:22,0:22:36.73:85,0,37	0/1:22,0:22:32.49:57,0,32	0/0:15,0:15:3:0,3,32	0/0:9,0:9:2.60:0,3,45	0/0:15,0:21:14.87:0,15,111	0/0:10,0:10:9.03:0,9,137	0/0:17,0:17:15.05:0,15,229	0/0:17,0:18:17.01:0,17,233	1/1:17,0:17:3.90:42,4,0	0/1:23,0:22:0:0,0,0	./.	1/1:15,0:15:2.70:25,3,0	1/1:16,0:16:5.38:64,5,0	1/1:9,7:16:3.01:69,3,0	0/0:17,0:22:8.80:0,9,69	0/0:14,0:21:9.48:0,9,84	1/1:24,4:30:6.49:125,6,0	0/0:21,0:22:2.39:0,2,26
chr10	96647486	.	C	CA	3618.57	PASS	AB=0.765;AC=39;AF=0.696;AN=56;BaseQRankSum=-4.657;DP=525;FS=1.592;HRun=15;HaplotypeScore=91.6443;InbreedingCoeff=0.4129;MQ=69.92;MQ0=7;MQRankSum=-0.815;QD=8.22;ReadPosRankSum=-1.741;VQSLOD=2.5683;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,2:27:40.10:270,40,0	0/0:2,0:7:12.55:0,13,37	0/1:48,0:19:32.54:33,0,51	0/1:31,1:21:7.38:32,0,7	0/0:5,0:22:39.15:0,39,116	0/1:9,6:16:2.27:174,0,2	1/1:6,2:9:11.70:75,12,0	1/1:13,16:28:14.39:198,14,0	1/1:6,3:9:11.97:98,12,0	0/1:9,12:22:3.16:180,0,3	1/1:13,10:24:0.80:277,1,0	0/1:6,3:9:0.04:106,0,0	1/1:1,6:7:8.90:66,9,0	1/1:6,3:9:17.78:129,18,0	0/0:5,0:17:24.39:0,24,71	1/1:10,0:13:8.11:117,8,0	1/1:16,2:30:58.33:334,58,0	1/1:15,2:23:38.01:246,38,0	0/1:18,8:27:27.97:115,0,28	1/1:6,14:20:32.77:247,33,0	1/1:3,5:9:2.16:45,2,0	1/1:0,2:3:8.83:64,9,0	1/1:6,8:14:29.96:249,30,0	1/1:1,5:6:8.99:76,9,0	0/0:5,0:18:28.58:0,29,81	0/0:8,0:21:26.19:0,26,75	1/1:7,12:21:15.17:206,15,0	0/1:10,17:28:3.24:283,0,3
chr10	96647562	.	C	CA	12248.19	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-10.898;DP=505;FS=10.514;HRun=3;HaplotypeScore=55.5878;InbreedingCoeff=0.9868;MQ=81.36;MQ0=1;MQRankSum=-2.378;QD=36.89;ReadPosRankSum=2.831;VQSLOD=4.8741;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:28:72.24:1008,72,0	1/1:1,10:11:33.06:424,33,0	0/0:13,0:13:32.47:0,32,347	0/0:16,0:16:33.51:0,34,360	1/1:3,17:20:54.17:739,54,0	1/1:0,16:16:48.16:672,48,0	1/1:1,21:22:60.20:840,60,0	0/0:35,0:35:96.29:0,96,1152	1/1:1,8:9:27.08:362,27,0	1/1:1,16:17:51.10:657,51,0	1/1:2,14:16:42.14:579,42,0	1/1:0,10:10:27.09:378,27,0	1/1:0,7:7:18.06:252,18,0	1/1:2,13:15:33.11:458,33,0	1/1:2,16:18:51.16:691,51,0	1/1:1,11:12:33.11:455,33,0	1/1:3,25:28:69.21:948,69,0	1/1:1,18:19:54.18:756,54,0	0/0:25,0:25:69.20:0,69,817	0/0:21,0:21:57.17:0,57,683	0/0:40,0:40:99:0,111,1317	1/1:0,7:7:18.06:252,18,0	1/1:2,9:11:27.05:355,27,0	1/1:2,19:21:51.17:714,51,0	1/1:3,17:20:54.17:740,54,0	1/1:1,23:24:72.21:968,72,0	0/0:20,0:20:54.16:0,54,645	0/0:3,0:3:9.03:0,9,108
chr10	96649122	.	G	GT	74.73	PASS	AB=0.939;AC=9;AF=0.180;AN=50;BaseQRankSum=-0.921;DP=159;FS=0.000;HRun=0;HaplotypeScore=36.7205;InbreedingCoeff=-0.0840;MQ=50.97;MQ0=40;MQRankSum=-0.532;QD=1.53;ReadPosRankSum=-3.139;VQSLOD=0.6528;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:7:13.88:0,14,64	0/1:2,0:2:10.03:31,0,10	./.	0/0:5,0:3:2.99:0,3,24	./.	0/1:5,0:4:7.96:18,0,8	0/0:8,0:6:14.53:0,15,98	0/0:7,0:4:2.75:0,3,19	0/0:8,0:7:17.09:0,17,91	0/0:5,0:3:7.42:0,7,27	0/0:1,0:1:2.98:0,3,22	0/0:6,0:5:5.59:0,6,26	0/0:6,0:4:8.85:0,9,57	0/0:7,0:5:11.04:0,11,54	0/1:12,1:12:18.60:19,0,48	0/0:3,0:2:5.78:0,6,32	0/1:4,0:3:9.26:9,0,21	0/0:10,0:9:17.96:0,18,119	0/0:13,0:2:5.52:0,6,27	0/0:2,0:2:4.22:0,4,24	0/1:2,0:2:0:0,0,0	0/0:8,0:6:7.98:0,8,33	0/1:1,0:1:0:0,0,0	0/1:10,0:8:4.33:4,0,57	0/1:5,1:6:17.65:39,0,18	0/1:3,3:6:23.52:69,0,24	0/0:5,0:4:11.45:0,11,76	./.
chr10	96649157	.	GTGT	G	2362.53	PASS	AB=1.000;AC=47;AF=0.904;AN=52;BaseQRankSum=-1.491;DP=161;FS=0.980;HRun=0;HaplotypeScore=31.7669;InbreedingCoeff=0.4644;MQ=82.61;MQ0=2;MQRankSum=-1.552;QD=17.90;ReadPosRankSum=-0.051;VQSLOD=2.8458;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:15:136,15,0	1/1:5,0:5:14.78:109,15,0	0/0:14,0:10:27.05:0,27,279	0/0:10,0:8:17.98:0,18,166	1/1:0,2:2:2.92:17,3,0	1/1:7,0:7:13.45:122,13,0	1/1:9,0:9:16.87:157,17,0	1/1:6,0:6:14.95:126,15,0	0/1:5,0:5:24.22:39,0,24	1/1:4,0:4:11.38:90,11,0	1/1:3,0:3:9.01:101,9,0	1/1:6,0:5:2.80:35,3,0	1/1:4,0:4:5.99:48,6,0	1/1:3,1:4:12.01:112,12,0	1/1:6,0:6:17.15:132,17,0	1/1:4,0:4:12:105,12,0	1/1:6,0:6:17.87:144,18,0	1/1:7,0:7:12.55:105,13,0	1/1:4,0:3:6:54,6,0	1/1:0,7:7:14.70:127,15,0	1/1:9,0:9:20.93:169,21,0	./.	1/1:4,0:4:8.52:78,9,0	1/1:7,0:7:0.21:91,0,0	1/1:5,0:5:12.01:120,12,0	1/1:6,0:6:14.96:127,15,0	1/1:6,0:6:17.98:152,18,0	./.
chr10	96649521	.	GGGGAA	G	2908.73	PASS	AB=0.971;AC=28;AF=0.500;AN=56;BaseQRankSum=-6.822;DP=404;FS=30.713;HRun=0;HaplotypeScore=108.6836;InbreedingCoeff=0.6804;MQ=83.82;MQ0=0;MQRankSum=-6.609;QD=14.33;ReadPosRankSum=-0.623;VQSLOD=1.0806;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:20.33:181,20,0	0/0:4,0:4:5.96:0,6,124	0/0:33,0:18:27.27:0,27,400	0/0:23,0:15:27.08:0,27,539	0/0:2,0:5:15.05:0,15,276	1/1:16,1:17:17.85:159,18,0	1/1:17,2:19:4.13:206,4,0	0/0:28,0:28:58.61:0,59,560	1/1:6,8:14:16.95:224,17,0	1/1:8,1:9:15.01:206,15,0	1/1:3,7:10:15:189,15,0	1/1:7,10:17:32.84:441,33,0	1/1:11,0:11:28.99:344,29,0	1/1:11,2:13:18.23:213,18,0	0/0:3,0:7:9.03:0,9,188	0/1:4,0:4:35.43:57,0,35	0/1:19,0:19:0.98:286,0,1	1/1:11,0:11:21.48:185,21,0	0/0:18,0:18:40.37:0,40,466	0/0:8,0:8:18.05:0,18,215	0/0:25,0:25:54.14:0,54,583	1/1:0,5:5:6.02:115,6,0	1/1:1,10:11:8.39:172,8,0	0/1:15,1:16:5.36:122,0,5	0/0:4,0:5:12.04:0,12,261	0/1:4,1:17:18.51:19,0,603	0/0:20,0:20:51.12:0,51,554	0/0:25,0:25:72.18:0,72,772
chr10	96649522	.	GGGAA	G	3965.94	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-9.116;DP=399;FS=32.854;HRun=0;HaplotypeScore=98.1462;InbreedingCoeff=0.8475;MQ=83.37;MQ0=0;MQRankSum=-6.768;QD=21.79;ReadPosRankSum=-1.231;VQSLOD=1.4796;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:20.96:224,21,0	0/0:4,0:4:5.96:0,6,110	0/0:30,0:16:24.42:0,24,316	0/0:24,0:16:27.09:0,27,492	0/0:5,0:5:15.05:0,15,245	1/1:2,14:16:18.06:287,18,0	1/1:6,11:17:21.03:321,21,0	0/0:28,0:28:57.66:0,58,364	1/1:13,1:14:17.88:270,18,0	1/1:6,3:9:15.05:213,15,0	1/1:9,1:10:15.05:196,15,0	1/1:15,2:17:32.83:437,33,0	1/1:8,3:11:30.09:399,30,0	1/1:4,9:13:24.04:342,24,0	0/0:7,0:7:9.03:0,9,150	0/1:4,0:4:20.08:57,0,20	1/1:19,0:19:41.45:492,41,0	1/1:11,0:11:26.90:303,27,0	0/0:19,0:19:41.75:0,42,296	0/0:8,0:8:17.88:0,18,136	0/0:26,0:26:53.39:0,53,355	1/1:5,0:5:6.02:69,6,0	1/1:10,0:10:8.63:103,9,0	1/1:4,12:16:17.82:251,18,0	0/0:5,0:5:12.04:0,12,211	0/0:16,0:16:4.45:0,4,544	0/0:20,0:20:50.29:0,50,338	0/0:25,0:25:71.08:0,71,468
chr10	96649523	.	GGAA	G	3114.14	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-7.295;DP=389;FS=32.697;HRun=0;HaplotypeScore=92.1307;InbreedingCoeff=0.8708;MQ=82.20;MQ0=0;MQRankSum=-7.785;QD=17.69;ReadPosRankSum=-1.318;VQSLOD=1.1399;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:21.06:243,21,0	0/0:4,0:4:5.96:0,6,95	0/0:27,0:14:20.77:0,21,244	0/0:22,0:15:30.55:0,31,448	0/0:5,0:5:15.05:0,15,219	1/1:15,0:15:18.03:172,18,0	1/1:14,3:17:21.03:202,21,0	0/0:28,0:28:45.68:0,46,170	1/1:9,3:12:18.04:184,18,0	1/1:8,0:8:15.04:185,15,0	1/1:10,0:10:15.04:169,15,0	1/1:13,3:16:30.05:292,30,0	1/1:9,2:11:30.08:357,30,0	1/1:11,2:13:24.04:239,24,0	0/0:6,0:6:9.03:0,9,128	0/1:4,0:4:5.16:57,0,5	1/1:17,3:20:47.62:576,48,0	1/1:10,0:10:27.08:356,27,0	0/0:20,0:20:33.72:0,34,125	0/0:8,0:8:14.98:0,15,61	0/0:26,0:26:40.84:0,41,134	1/1:5,0:5:6.01:57,6,0	1/1:10,0:10:8.94:86,9,0	1/1:14,1:15:17.87:159,18,0	0/0:5,0:5:12.03:0,12,169	0/0:16,0:16:7.57:0,8,504	0/0:21,0:21:35.06:0,35,118	0/0:25,0:25:53.92:0,54,175
chr10	96649524	.	GA	G	4983.60	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=1.671;DP=383;FS=1.363;HRun=2;HaplotypeScore=74.6761;InbreedingCoeff=0.8542;MQ=82.76;MQ0=0;MQRankSum=-5.852;QD=16.61;ReadPosRankSum=4.006;VQSLOD=5.0494;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:10:20.15:109,20,0	0/0:4,0:4:5.92:0,6,48	0/0:24,0:14:12.96:0,13,123	0/0:21,0:15:23.52:0,24,235	0/0:5,0:5:14.74:0,15,108	1/1:15,0:15:13.90:48,14,0	1/1:17,0:17:15.51:48,16,0	1/1:0,28:28:84:840,84,0	1/1:12,0:12:13.47:44,13,0	1/1:8,0:8:13.01:57,13,0	1/1:8,0:9:13.27:68,13,0	1/1:16,0:16:22.34:72,22,0	1/1:11,0:11:25.70:115,26,0	1/1:13,0:13:15.12:49,15,0	0/0:6,0:6:8.98:0,9,76	1/1:2,0:3:2.28:19,2,0	1/1:18,0:19:44.79:254,45,0	1/1:9,0:10:25.68:152,26,0	1/1:0,20:20:58.32:644,58,0	1/1:0,8:8:18.05:215,18,0	1/1:0,26:26:54.17:686,54,0	1/1:5,0:5:4.44:14,4,0	1/1:10,0:10:6.56:21,7,0	1/1:15,0:15:13.70:45,14,0	0/0:5,0:5:11.65:0,12,81	0/0:17,0:17:25.18:0,25,272	1/1:1,19:20:45.14:570,45,0	1/1:0,25:25:72.23:914,72,0
chr10	96650348	.	GAA	G	7110.19	PASS	AB=0.750;AC=28;AF=0.500;AN=56;BaseQRankSum=-6.814;DP=600;FS=25.419;HRun=11;HaplotypeScore=95.9794;InbreedingCoeff=0.8577;MQ=72.83;MQ0=0;MQRankSum=-1.417;QD=23.70;ReadPosRankSum=2.635;VQSLOD=2.6708;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:2,1:45:94.93:0,95,363	0/0:7,0:7:18.06:0,18,275	0/1:15,0:14:5.44:5,0,229	0/0:9,0:10:5.46:0,5,113	0/0:26,0:29:74.74:0,75,1115	1/1:5,25:30:75.15:798,75,0	1/1:2,18:20:51.12:543,51,0	0/0:4,0:23:57.06:0,57,559	1/1:0,22:22:63.16:670,63,0	1/1:0,20:21:54.09:630,54,0	1/1:1,16:17:39.07:415,39,0	1/1:4,17:21:48.12:511,48,0	1/1:4,17:21:45.10:479,45,0	1/1:1,10:11:30.07:319,30,0	0/0:19,0:19:51.17:0,51,769	0/1:0,1:9:8.95:9,0,46	1/1:3,25:28:60.11:639,60,0	1/1:3,23:27:56.85:584,57,0	0/0:6,0:34:93.17:0,93,954	0/0:5,0:24:66.11:0,66,652	0/0:4,0:17:30.06:0,30,322	1/1:5,10:15:30.06:315,30,0	1/1:1,18:20:53.87:555,54,0	1/1:2,21:23:60.13:639,60,0	0/0:21,0:21:54.17:0,54,810	0/0:14,1:15:10.21:0,10,568	0/0:6,0:37:87.12:0,87,833	0/0:3,0:19:57.06:0,57,533
chr10	96650825	.	T	TC	9893.32	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-9.419;DP=629;FS=10.483;HRun=7;HaplotypeScore=68.2851;InbreedingCoeff=0.9867;MQ=71.61;MQ0=3;MQRankSum=-1.688;QD=26.96;ReadPosRankSum=2.396;VQSLOD=5.2452;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,123,1181	1/1:0,10:10:26.94:326,27,0	0/0:28,0:22:45.47:0,45,470	0/0:31,0:23:33.28:0,33,364	1/1:3,12:15:7.05:351,7,0	1/1:2,14:16:33.10:399,33,0	1/1:4,27:31:74.18:888,74,0	0/0:23,0:23:30.03:0,30,290	1/1:0,13:13:33.10:398,33,0	1/1:5,20:25:57.10:646,57,0	1/1:3,23:26:60.18:723,60,0	1/1:2,16:18:33.10:398,33,0	1/1:2,17:19:36.10:423,36,0	1/1:0,23:23:54.17:652,54,0	1/1:2,16:18:42.13:507,42,0	0/0:19,0:19:51.08:0,51,492	1/1:5,27:32:42.49:771,42,0	1/1:0,20:20:57.17:689,57,0	0/0:28,0:27:64.02:0,64,634	0/0:19,0:19:39.04:0,39,371	0/0:19,0:19:49.23:0,49,489	1/1:7,13:20:33.10:398,33,0	1/1:4,15:19:40:471,40,0	1/1:2,19:21:57.17:689,57,0	1/1:4,19:23:51.11:600,51,0	1/1:2,16:18:48.13:566,48,0	0/0:23,0:23:63.08:0,63,602	0/0:19,0:18:39.05:0,39,375
chr10	96651334	.	T	TCATC	4860.15	PASS	AB=0.753;AC=18;AF=0.360;AN=50;BaseQRankSum=-10.334;DP=626;FS=7.968;HRun=0;HaplotypeScore=90.9163;InbreedingCoeff=0.5453;MQ=75.28;MQ0=9;MQRankSum=-0.748;QD=18.69;ReadPosRankSum=-0.067;VQSLOD=3.8663;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:26:15.75:0,16,122	0/0:6,0:6:9.03:0,9,139	./.	./.	0/0:10,0:10:9.03:0,9,139	0/1:10,11:21:28.12:327,0,28	0/0:24,7:31:2.88:0,3,15	0/0:37,0:34:2.98:0,3,22	1/1:18,17:36:45.15:1054,45,0	0/0:9,0:8:6.02:0,6,92	./.	1/1:21,13:34:18.06:411,18,0	0/1:6,4:10:23.56:131,0,24	0/1:14,18:32:2.05:804,0,2	0/0:41,0:41:60.17:0,60,864	0/1:15,0:25:26.91:27,0,147	1/1:11,9:20:24.08:562,24,0	1/1:5,9:13:15.05:351,15,0	0/0:17,0:16:6.02:0,6,92	0/0:11,0:11:9.03:0,9,136	0/0:45,0:45:72.11:0,72,1033	1/1:11,4:16:9.03:211,9,0	1/1:9,3:12:9.03:211,9,0	1/1:20,20:40:33.11:773,33,0	0/0:12,0:12:12.04:0,12,178	0/0:22,0:22:27.06:0,27,371	0/0:13,0:13:24.06:0,24,346	0/0:15,0:16:12.03:0,12,164
chr10	96652406	.	GA	G	3085.06	PASS	AB=0.926;AC=26;AF=0.464;AN=56;BaseQRankSum=10.034;DP=438;FS=6.616;HRun=10;HaplotypeScore=50.5994;InbreedingCoeff=0.7212;MQ=81.63;MQ0=6;MQRankSum=0.199;QD=12.54;ReadPosRankSum=-0.102;VQSLOD=2.7859;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:68.19:0,68,769	1/1:0,7:7:18:156,18,0	0/1:32,1:21:26.97:27,0,123	0/1:38,0:16:4.63:5,0,52	1/1:0,17:17:47.99:416,48,0	0/0:19,0:19:45.11:0,45,489	0/1:8,1:9:1.98:2,0,208	1/1:7,24:32:73.99:627,74,0	0/0:6,0:6:18.03:0,18,190	0/0:16,0:17:47.96:0,48,512	0/0:12,0:12:8.05:0,8,291	0/0:12,0:13:32.92:0,33,346	0/0:15,0:15:42.07:0,42,442	0/0:4,0:4:12.03:0,12,133	1/1:2,8:10:17.99:156,18,0	0/0:14,0:14:39.09:0,39,423	0/0:28,2:30:32.12:0,32,810	0/0:19,0:19:54.13:0,54,587	1/1:2,18:21:26.17:441,26,0	1/1:1,12:13:35.99:312,36,0	1/1:3,2:5:6:52,6,0	0/0:4,0:4:12.03:0,12,133	0/1:4,1:5:14.04:14,0,79	0/0:11,0:11:33.07:0,33,356	1/1:4,17:21:41.99:365,42,0	1/1:1,17:18:50.97:439,51,0	1/1:1,8:9:18:156,18,0	1/1:1,6:7:15:130,15,0
chr10	96653009	.	C	CG	1073.82	PASS	AB=0.729;AC=18;AF=0.321;AN=56;BaseQRankSum=-5.021;DP=454;FS=37.611;HRun=9;HaplotypeScore=64.4935;InbreedingCoeff=0.5029;MQ=74.88;MQ0=0;MQRankSum=-0.484;QD=7.16;ReadPosRankSum=0.736;VQSLOD=-0.4922;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:67.25:0,67,491	0/0:1,0:4:6.11:0,6,18	0/0:30,0:24:10.02:0,10,251	0/0:24,0:19:11.06:0,11,192	0/0:3,0:9:9.96:0,10,29	1/1:10,2:12:2.89:33,3,0	0/1:8,11:19:9.88:119,0,10	0/0:11,0:11:5.81:0,6,64	1/1:0,10:10:15.04:166,15,0	0/1:7,0:7:19.89:20,0,20	1/1:1,2:3:3.01:33,3,0	0/1:9,12:21:3.65:117,0,4	1/1:8,13:22:25.92:270,26,0	1/1:8,5:13:21.48:209,21,0	0/0:4,0:26:40.52:0,41,118	0/0:11,0:11:0.19:0,0,97	0/0:22,0:22:14.44:0,14,252	0/0:26,0:27:59.02:0,59,456	0/0:10,0:10:17.94:0,18,143	0/0:8,0:8:11.49:0,11,84	0/0:30,0:30:43.73:0,44,351	1/1:6,0:6:4.58:42,5,0	0/1:5,6:11:23.55:25,0,24	1/1:10,16:25:7.78:217,8,0	0/0:2,0:15:17.34:0,17,52	0/0:0,0:25:44.15:0,44,128	0/0:15,0:15:38.19:0,38,302	0/0:4,0:5:5.03:0,5,32
chr10	96653187	.	T	TCAA	4504.40	PASS	AB=0.615;AC=11;AF=0.196;AN=56;BaseQRankSum=-7.147;DP=615;FS=34.382;HRun=0;HaplotypeScore=89.1346;InbreedingCoeff=0.8621;MQ=71.25;MQ0=1;MQRankSum=-2.840;QD=31.06;ReadPosRankSum=-2.496;VQSLOD=2.5193;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:96.28:0,96,1303	0/0:13,0:13:24.08:0,24,334	0/0:14,0:12:6.02:0,6,75	0/0:23,0:22:24.06:0,24,306	0/0:16,0:16:39.13:0,39,546	0/0:20,0:20:42.14:0,42,587	0/0:21,0:22:40.32:0,40,546	1/1:22,7:31:36.08:633,36,0	0/0:15,0:15:39.13:0,39,546	0/0:23,0:23:60.19:0,60,826	0/0:11,0:11:24.08:0,24,336	0/0:26,0:26:53.81:0,54,733	0/0:23,0:23:48.14:0,48,652	0/0:20,0:20:42.14:0,42,588	0/0:29,0:29:63.21:0,63,879	0/0:12,0:12:30.10:0,30,420	0/0:41,0:41:28.90:0,29,1039	0/0:28,0:28:62.21:0,62,990	1/1:17,10:26:36.12:719,36,0	1/1:7,13:22:51.04:876,51,0	0/1:12,18:32:29.81:888,0,30	0/0:18,0:18:33.11:0,33,461	0/0:12,0:12:18.06:0,18,252	0/0:15,0:15:21.07:0,21,294	0/0:16,0:16:42.14:0,42,588	0/0:31,0:31:72.20:0,72,944	1/1:6,11:18:39.09:731,39,0	1/1:4,11:15:33.11:658,33,0
chr10	96653570	.	C	CT	10688.48	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-0.416;DP=605;FS=3.986;HRun=1;HaplotypeScore=71.3877;InbreedingCoeff=0.9987;MQ=75.14;MQ0=0;MQRankSum=-1.327;QD=41.92;ReadPosRankSum=-1.893;VQSLOD=4.6605;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.30:0,93,1206	1/1:0,8:8:24.08:360,24,0	0/0:10,0:9:27.06:0,27,319	0/0:15,0:15:20.15:0,20,456	1/1:1,28:29:84.24:1234,84,0	0/0:33,0:33:99:0,99,1285	0/0:17,0:17:51.15:0,51,648	1/1:2,27:29:81.22:1135,81,0	0/0:28,0:28:81.26:0,81,1051	0/0:26,0:26:66.21:0,66,846	0/0:38,0:38:99:0,114,1479	0/0:12,0:12:30.10:0,30,390	0/0:17,0:17:48.16:0,48,622	0/0:19,0:19:57.19:0,57,739	1/1:0,30:30:87.29:1304,87,0	0/0:14,0:14:42.14:0,42,544	0/0:14,0:14:36.12:0,36,467	0/0:16,0:16:48.16:0,48,623	1/1:1,14:15:45.12:640,45,0	1/1:0,37:37:99:1384,99,0	1/1:0,22:22:63.21:944,63,0	0/0:19,0:19:51.15:0,51,647	0/0:21,0:21:57.19:0,57,740	0/0:19,0:19:54.15:0,54,683	1/1:0,18:18:54.14:784,54,0	1/1:0,24:24:72.23:1059,72,0	1/1:1,27:28:78.26:1169,78,0	1/1:0,15:15:45.15:674,45,0
chr10	96654397	.	A	ATC	13898.18	PASS	AB=0.525;AC=21;AF=0.375;AN=56;BaseQRankSum=-16.455;DP=687;FS=2.885;HRun=0;HaplotypeScore=77.4355;InbreedingCoeff=0.9079;MQ=89.93;MQ0=0;MQRankSum=-3.244;QD=56.50;ReadPosRankSum=-1.386;VQSLOD=4.7299;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,2151	1/1:0,8:8:24.08:487,24,0	0/0:27,0:27:77.85:0,78,1211	0/0:25,0:25:72.21:0,72,1137	1/1:0,15:15:39.13:792,39,0	0/0:17,0:17:45:0,45,672	0/0:19,0:19:54.17:0,54,858	1/1:0,30:31:93.30:1809,93,0	0/0:38,0:38:99:0,111,1804	0/0:19,0:19:54.18:0,54,860	0/0:22,0:22:63.20:0,63,1001	0/0:24,0:24:72.23:0,72,1151	0/0:23,0:23:69.21:0,69,1074	0/0:26,0:26:78.26:0,78,1247	1/1:1,34:35:99:2011,99,0	0/0:44,0:44:99:0,132,2153	0/0:25,0:25:75.24:0,75,1198	0/0:24,0:24:72.25:0,72,1174	1/1:0,22:24:72.22:1388,72,0	1/1:0,18:20:51.17:1024,51,0	1/1:2,27:29:81.28:1645,81,0	0/0:23,0:23:63.22:0,63,1028	0/0:16,0:16:48.15:0,48,760	0/0:25,0:25:72.25:0,72,1170	1/1:0,28:29:81.28:1644,81,0	0/1:2,19:21:34.69:1094,0,35	1/1:0,31:32:93.32:1882,93,0	1/1:0,2:2:6.02:122,6,0
chr10	96654870	.	TA	T	996.92	PASS	AB=0.917;AC=14;AF=0.250;AN=56;BaseQRankSum=-4.709;DP=302;FS=30.001;HRun=9;HaplotypeScore=48.4978;InbreedingCoeff=0.5481;MQ=83.01;MQ0=2;MQRankSum=0.096;QD=14.24;ReadPosRankSum=-0.442;VQSLOD=1.4242;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.20:0,69,796	1/1:0,2:2:3:27,3,0	0/0:9,1:6:12:0,12,125	0/0:16,0:16:12.86:0,13,90	1/1:0,7:7:21.01:192,21,0	0/0:12,1:13:12.66:0,13,159	0/1:6,0:6:9.56:10,0,51	0/0:33,0:33:84.77:0,85,505	0/0:7,0:7:6.26:0,6,58	0/0:10,0:10:20:0,20,110	0/0:6,0:6:14.51:0,15,82	0/1:7,0:7:6.52:7,0,75	0/1:7,0:7:9.50:9,0,58	0/0:6,0:6:14.62:0,15,89	1/1:1,5:6:9:82,9,0	0/0:3,0:3:9.03:0,9,104	0/0:25,0:25:63.19:0,63,727	0/0:19,0:21:56.80:0,57,595	0/0:18,0:18:43.89:0,44,260	0/0:7,0:7:17.80:0,18,126	0/0:6,0:6:14.78:0,15,94	0/1:1,1:2:9.25:22,0,9	0/0:6,0:6:14.74:0,15,103	0/0:3,0:3:8.75:0,9,50	1/1:0,16:16:39.02:357,39,0	1/1:0,17:17:51.02:463,51,0	0/0:4,0:4:11.86:0,12,79	0/0:11,0:10:32.60:0,33,222
chr10	96655515	.	G	GA	5852.45	PASS	AB=0.654;AC=28;AF=0.500;AN=56;BaseQRankSum=-12.124;DP=623;FS=8.843;HRun=11;HaplotypeScore=68.7819;InbreedingCoeff=0.6771;MQ=67.38;MQ0=0;MQRankSum=-0.783;QD=16.39;ReadPosRankSum=0.558;VQSLOD=5.2942;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,31:48:56.07:742,56,0	0/0:15,0:15:34.68:0,35,260	0/0:10,0:12:20.39:0,20,117	0/0:9,0:9:14.37:0,14,113	0/0:27,1:30:33.36:0,33,422	0/1:7,16:24:8.23:321,0,8	1/1:3,14:17:0.81:190,1,0	0/0:30,1:33:16.33:0,16,443	0/1:4,16:20:1.39:351,0,1	1/1:7,20:28:10.31:439,10,0	0/1:11,15:27:25.26:361,0,25	1/1:7,9:16:12.82:305,13,0	1/1:1,15:16:39.06:386,39,0	1/1:1,15:16:36.07:365,36,0	0/0:21,0:21:46.84:0,47,354	1/1:4,15:19:43.76:445,44,0	1/1:5,15:21:41.86:393,42,0	1/1:3,15:19:12.67:296,13,0	0/0:23,1:26:27.38:0,27,372	0/0:23,0:24:31.38:0,31,414	0/0:25,0:25:51.85:0,52,383	1/1:5,19:24:30.87:494,31,0	1/1:3,13:17:18.69:356,19,0	1/1:6,18:24:4.76:383,5,0	0/1:15,4:20:23.03:23,0,198	0/0:23,0:24:52.72:0,53,398	0/0:27,3:30:16.78:0,17,496	0/0:13,1:15:10.41:0,10,249
chr10	96656475	.	T	TACAC	4443.81	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-3.637;DP=617;FS=13.623;HRun=0;HaplotypeScore=128.5422;InbreedingCoeff=0.9922;MQ=70.05;MQ0=7;MQRankSum=-7.184;QD=34.99;ReadPosRankSum=-5.064;VQSLOD=2.4301;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.13:0,54,896	0/0:12,0:12:30.10:0,30,522	0/0:38,0:23:57.02:0,57,913	0/0:25,0:20:36.01:0,36,557	0/0:27,0:27:60.16:0,60,1001	0/0:27,0:27:57.12:0,57,959	0/0:34,0:34:72.88:0,73,1162	1/1:7,22:29:66.08:1173,66,0	0/0:18,0:17:33.08:0,33,541	0/0:21,0:21:54.17:0,54,890	0/0:16,0:16:45.10:0,45,761	0/0:31,0:31:78.08:0,78,1213	0/0:18,0:17:45.11:0,45,780	0/0:22,0:22:44.83:0,45,707	0/0:22,0:22:33.11:0,33,569	0/0:21,0:21:54.18:0,54,948	0/0:23,0:23:45.12:0,45,732	0/0:20,0:19:42.05:0,42,613	1/1:3,14:17:45.08:905,45,0	1/1:8,18:26:48.16:1081,48,0	1/1:8,21:29:23.80:508,24,0	0/0:19,0:19:48.08:0,48,773	0/0:13,0:13:30.02:0,30,518	0/0:20,0:20:28.09:0,28,599	0/0:16,0:16:30.08:0,30,487	0/0:27,0:26:63.21:0,63,1091	1/1:4,13:18:24.05:498,24,0	1/1:8,0:7:12.04:279,12,0
chr10	96656489	.	AACACACACACACAC	A	850.42	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=4.406;DP=624;FS=0.000;HRun=0;HaplotypeScore=230.3440;InbreedingCoeff=0.7704;MQ=55.98;MQ0=11;MQRankSum=-5.078;QD=8.26;ReadPosRankSum=-2.437;VQSLOD=1.9823;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:41.20:0,41,1808	1/1:11,0:12:5.95:115,6,0	./.	./.	1/1:15,7:22:5.38:125,5,0	0/0:24,0:24:18.39:0,18,1001	0/0:31,0:31:31.73:0,32,1276	0/0:21,0:20:15.04:0,15,229	0/0:14,0:17:29.25:0,29,1494	0/0:22,0:22:42.14:0,42,1747	0/0:15,0:20:6.02:0,6,351	0/0:30,0:30:34.76:0,35,1630	0/0:22,0:21:20.65:0,21,902	0/0:26,0:27:37.01:0,37,1911	1/1:9,15:24:6.02:234,6,0	0/0:19,0:19:21.07:0,21,1224	0/0:15,0:26:15.02:0,15,596	0/0:14,0:22:29.78:0,30,1139	0/0:16,0:16:17.09:0,17,873	0/0:22,0:22:5.20:0,5,317	0/0:35,0:35:10.13:0,10,363	0/0:11,0:23:6.02:0,6,292	0/0:12,0:12:11.95:0,12,502	0/0:16,0:26:14.54:0,15,846	1/1:7,12:20:9.03:308,9,0	1/1:23,0:23:8.65:211,9,0	0/0:18,0:19:14.88:0,15,476	0/0:9,0:8:12.04:0,12,330
chr10	96656969	.	TG	T	5731.60	PASS	AB=0.927;AC=28;AF=0.500;AN=56;BaseQRankSum=7.495;DP=559;FS=5.351;HRun=9;HaplotypeScore=65.6346;InbreedingCoeff=0.8783;MQ=70.51;MQ0=0;MQRankSum=0.092;QD=19.30;ReadPosRankSum=4.471;VQSLOD=5.3562;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:54.16:0,54,621	0/0:7,0:7:21.06:0,21,242	0/1:17,1:16:15.53:16,0,179	0/0:21,0:19:19.64:0,20,252	0/0:21,0:21:57.17:0,57,657	1/1:4,15:19:39.02:357,39,0	1/1:4,20:24:48.02:439,48,0	0/0:20,0:20:48.09:0,48,523	1/1:3,20:23:51.02:467,51,0	1/1:2,23:25:65.25:583,65,0	1/1:0,12:12:33.02:302,33,0	1/1:1,15:16:45.02:412,45,0	1/1:1,15:16:39.01:357,39,0	1/1:1,19:20:48.02:439,48,0	0/0:19,0:19:51.15:0,51,588	0/0:23,0:23:36.12:0,36,665	1/1:0,26:26:78.04:714,78,0	1/1:2,18:20:51.02:467,51,0	0/1:17,2:19:3.82:4,0,454	0/0:18,0:18:39.12:0,39,449	0/0:30,0:30:59.86:0,60,932	1/1:1,16:17:30:270,30,0	1/1:3,9:12:27.01:247,27,0	1/1:1,28:29:72.03:659,72,0	0/0:25,1:26:41.73:0,42,724	0/0:22,1:23:32.71:0,33,630	0/0:15,0:15:39.12:0,39,450	0/0:15,0:15:42.12:0,42,485
chr10	96657924	.	TTCCCGACTC	T	14826.68	PASS	AB=0.931;AC=43;AF=0.827;AN=52;BaseQRankSum=10.179;DP=505;FS=0.000;HRun=0;HaplotypeScore=123.7381;InbreedingCoeff=0.8078;MQ=29.73;MQ0=42;MQRankSum=-4.391;QD=36.88;ReadPosRankSum=4.221;VQSLOD=3.8749;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:14:15.05:439,15,0	0/0:6,0:6:18.06:0,18,743	./.	./.	0/0:14,0:14:21.07:0,21,854	1/1:2,21:19:33.11:953,33,0	1/1:4,10:13:18.06:526,18,0	1/1:8,12:15:21.07:477,21,0	1/1:3,22:19:24.02:702,24,0	1/1:3,8:9:21.04:549,21,0	1/1:3,11:14:20.99:479,21,0	1/1:2,21:20:42.14:1229,42,0	1/1:3,22:20:36.12:1053,36,0	1/1:2,15:12:18.06:526,18,0	0/0:36,0:31:36.12:0,36,1468	1/1:3,22:23:36.12:1053,36,0	1/1:5,17:17:27.09:786,27,0	1/1:2,7:7:15.05:439,15,0	1/1:3,11:13:21.03:431,21,0	1/1:1,15:16:27.56:751,28,0	1/1:4,6:7:5.98:108,6,0	1/1:2,11:13:24.08:702,24,0	1/1:3,11:14:24.08:702,24,0	1/1:2,15:15:9.03:263,9,0	0/0:15,0:15:29.74:0,30,964	0/1:25,2:26:99:112,0,2027	1/1:3,31:30:66.23:1931,66,0	1/1:1,7:8:21.07:615,21,0
chr10	96658224	.	C	CT	61.49	PASS	AB=0.965;AC=9;AF=0.161;AN=56;BaseQRankSum=4.461;DP=570;FS=31.814;HRun=0;HaplotypeScore=158.2942;InbreedingCoeff=-0.1317;MQ=53.92;MQ0=15;MQRankSum=2.590;QD=0.36;ReadPosRankSum=2.571;VQSLOD=0.9385;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:6:0.23:1,0,0	0/0:10,0:10:30.09:0,30,401	0/0:29,0:19:56.85:0,57,648	0/0:31,0:23:65.46:0,65,845	0/0:19,0:19:45.15:0,45,629	0/0:14,0:12:12.96:0,13,95	0/0:19,0:18:0.64:0,1,16	0/0:24,0:22:55.87:0,56,276	0/0:27,0:24:10.20:0,10,173	0/1:26,0:24:63.57:64,0,99	0/1:18,0:17:9.79:10,0,68	0/1:33,0:28:6.64:7,0,106	0/0:23,0:23:19.84:0,20,198	0/1:23,0:21:21.42:21,0,46	0/0:31,0:31:72.63:0,73,957	0/0:16,0:15:2.25:0,2,32	0/0:19,0:18:39.61:0,40,215	0/0:16,0:14:1.63:0,2,105	0/0:15,0:11:26.40:0,26,110	0/0:9,1:10:13:0,13,74	0/0:15,0:13:11.05:0,11,54	0/1:20,0:18:20.71:44,0,21	0/0:18,0:18:0.42:0,0,32	0/0:18,0:16:1.08:0,1,27	0/0:21,0:21:63.04:0,63,785	0/0:22,0:21:58.96:0,59,727	0/1:15,4:18:14.91:15,0,122	0/1:25,2:25:21.31:21,0,124
chr10	96658244	.	CTGTGTGTGTGTG	C	4106.97	PASS	AC=24;AF=0.462;AN=52;BaseQRankSum=8.280;DP=548;FS=4.316;HRun=0;HaplotypeScore=206.7092;InbreedingCoeff=0.7341;MQ=40.27;MQ0=27;MQRankSum=-5.714;QD=18.50;ReadPosRankSum=3.132;VQSLOD=2.3821;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:2.90:0,3,16	0/0:12,0:13:33.11:0,33,1365	0/0:24,0:10:3.01:0,3,54	0/0:24,0:9:4.83:0,5,102	0/0:14,0:14:15.03:0,15,287	1/1:7,5:9:9.03:300,9,0	1/1:13,6:21:9:285,9,0	0/0:35,0:31:45.07:0,45,1103	1/1:7,8:17:30.06:913,30,0	1/1:16,5:19:12.04:380,12,0	1/1:6,4:11:3.01:62,3,0	1/1:10,12:21:21:617,21,0	1/1:12,5:18:24.08:740,24,0	1/1:13,4:18:3.01:39,3,0	0/0:39,0:38:45.15:0,45,1812	1/1:23,0:21:4.15:91,4,0	1/1:10,2:12:4.16:206,4,0	1/1:7,5:11:6.08:369,6,0	0/0:14,0:9:12.01:0,12,429	0/0:21,0:19:8.64:0,9,460	0/0:14,0:12:5.63:0,6,337	./.	./.	1/1:14,1:15:3.01:105,3,0	0/0:21,0:21:24.07:0,24,1008	0/0:25,0:24:42.14:0,42,1864	0/0:25,0:22:33.11:0,33,1441	0/0:12,0:9:15.05:0,15,480
chr10	96658245	.	T	TCTCA	1390.66	PASS	AB=0.973;AC=29;AF=0.518;AN=56;BaseQRankSum=6.693;DP=493;FS=31.629;HRun=0;HaplotypeScore=162.9654;InbreedingCoeff=0.2010;MQ=41.47;MQ0=29;MQRankSum=-0.039;QD=4.33;ReadPosRankSum=-2.082;VQSLOD=1.1901;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:10.43:79,10,0	0/0:13,0:13:39.02:0,39,568	0/1:25,0:10:12.39:12,0,233	0/0:26,0:10:18.42:0,18,336	0/0:14,0:14:33.11:0,33,667	0/1:10,0:8:2.26:45,0,2	0/1:21,0:21:3.11:51,0,3	0/0:25,0:23:19.23:0,19,328	0/1:19,0:17:15.55:21,0,16	1/1:20,0:16:29.54:288,30,0	1/1:12,0:11:8.89:65,9,0	0/1:26,0:21:11.94:61,0,12	1/1:19,0:17:4.66:206,5,0	1/1:19,0:16:14.78:112,15,0	0/0:41,0:40:72.37:0,72,1257	0/1:14,0:13:8.60:77,0,9	1/1:12,0:11:3.40:48,3,0	0/1:13,0:11:14.29:19,0,14	0/0:7,0:5:14.90:0,15,111	0/1:15,0:13:13.29:13,0,60	0/1:9,0:7:16.94:17,0,19	1/1:17,0:15:9.93:76,10,0	1/1:14,0:14:9:97,9,0	1/1:17,0:15:5.65:68,6,0	0/0:21,0:21:51.09:0,51,952	0/0:25,0:24:27.12:0,27,942	0/1:19,0:17:99:100,0,127	0/1:7,1:9:32.90:120,0,33
chr10	96658267	.	T	TACA	236	PASS	AB=0.986;AC=7;AF=0.130;AN=54;BaseQRankSum=4.333;DP=525;FS=7.639;HRun=0;HaplotypeScore=172.1697;InbreedingCoeff=-0.0170;MQ=48.45;MQ0=30;MQRankSum=-4.822;QD=2.41;ReadPosRankSum=0.971;VQSLOD=2.2411;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:12.03:0,12,205	0/0:13,0:13:39.13:0,39,704	0/0:42,0:9:18.06:0,18,301	0/0:47,0:18:34.64:0,35,586	0/0:13,0:13:24.08:0,24,443	0/0:11,0:9:18.01:0,18,212	0/0:20,1:21:22.91:0,23,336	0/0:29,0:28:84.28:0,84,1402	0/1:25,0:23:99:159,0,241	0/0:14,0:10:26.92:0,27,329	0/1:11,0:10:49.55:62,0,50	0/0:28,0:25:13.85:0,14,320	0/1:20,0:18:70.48:70,0,399	0/1:12,1:11:32.15:32,0,48	0/0:42,0:41:87.19:0,87,1434	0/0:18,0:17:26.93:0,27,360	0/1:15,0:15:27.66:28,0,131	0/0:13,0:10:20.98:0,21,192	0/0:6,0:5:15.05:0,15,257	0/0:17,0:16:20.75:0,21,389	0/0:12,0:10:5.67:0,6,111	1/1:13,1:13:0.47:1,0,0	./.	0/0:18,1:18:5.99:0,6,48	0/0:17,0:17:36.10:0,36,635	0/0:20,0:19:10.04:0,10,949	0/0:22,0:20:45.15:0,45,790	0/0:6,0:5:15.05:0,15,273
chr10	96658269	.	T	TACA	258.97	PASS	AB=0.968;AC=8;AF=0.148;AN=54;BaseQRankSum=4.087;DP=500;FS=8.579;HRun=0;HaplotypeScore=147.7890;InbreedingCoeff=-0.0395;MQ=49.86;MQ0=30;MQRankSum=-4.711;QD=2.27;ReadPosRankSum=1.295;VQSLOD=2.1497;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:12.03:0,12,205	0/0:13,0:13:39.13:0,39,704	0/0:42,0:10:21.06:0,21,332	0/0:48,0:19:35.08:0,35,587	0/0:13,0:13:24.07:0,24,411	0/0:9,0:8:11.97:0,12,123	0/0:18,0:18:23.67:0,24,316	0/0:29,0:28:84.24:0,84,1407	0/1:21,0:21:99:185,0,196	0/0:12,0:8:23.98:0,24,312	0/1:11,1:11:29.82:30,0,50	0/1:25,0:23:14.86:15,0,306	0/1:17,1:16:99:129,0,263	0/1:13,0:11:4.99:5,0,50	0/0:41,0:40:81.26:0,81,1463	0/0:18,0:17:23.99:0,24,371	0/1:14,1:15:11.91:12,0,216	0/0:13,0:10:20.98:0,21,207	0/0:7,0:6:18.03:0,18,252	0/0:16,0:15:23.72:0,24,408	0/0:12,0:10:5.67:0,6,111	1/1:9,1:9:0.47:1,0,0	./.	0/0:12,3:14:6.46:0,6,78	0/0:17,0:17:36.11:0,36,637	0/0:20,0:19:54.19:0,54,1000	0/0:22,0:20:45.15:0,45,798	0/0:6,0:5:15.05:0,15,259
chr10	96658867	.	AG	A	6626.70	PASS	AB=0.643;AC=41;AF=0.732;AN=56;BaseQRankSum=1.243;DP=463;FS=39.812;HRun=8;HaplotypeScore=55.6590;InbreedingCoeff=0.8394;MQ=80.58;MQ0=0;MQRankSum=-2.894;QD=18.46;ReadPosRankSum=6.494;VQSLOD=2.6046;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,11:16:18.02:174,18,0	0/0:6,0:6:15.02:0,15,159	0/0:16,0:16:31.60:0,32,392	0/0:15,0:13:27.06:0,27,309	0/0:12,0:12:27.04:0,27,291	1/1:9,2:11:4.09:59,4,0	1/1:4,22:26:48.07:463,48,0	1/1:9,11:20:33.03:318,33,0	1/1:3,13:16:39.06:376,39,0	1/1:5,7:12:18.49:174,18,0	1/1:2,5:7:6.01:58,6,0	1/1:6,22:28:66.09:635,66,0	1/1:2,10:12:27.04:261,27,0	1/1:1,19:20:54.09:521,54,0	0/0:19,0:19:54.16:0,54,642	1/1:3,16:19:48.06:458,48,0	1/1:3,23:26:54.08:521,54,0	1/1:4,25:29:63.10:609,63,0	1/1:5,6:11:11.99:116,12,0	1/1:6,3:9:14.84:104,15,0	1/1:3,28:31:66.09:637,66,0	1/1:6,8:14:30.22:265,30,0	0/1:4,5:9:16.53:17,0,68	1/1:3,19:22:48.05:456,48,0	0/0:12,0:12:27.03:0,27,281	0/0:24,0:24:48.01:0,48,477	1/1:1,14:15:36.06:346,36,0	1/1:2,4:6:6.01:58,6,0
chr10	96659009	.	TTCTCGACAGAGCC	T	3480.68	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.816;DP=549;FS=10.125;HRun=0;HaplotypeScore=196.2930;InbreedingCoeff=0.9853;MQ=83.04;MQ0=0;MQRankSum=-9.273;QD=87.02;ReadPosRankSum=2.180;VQSLOD=2.8703;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.16:0,84,4603	0/0:6,0:6:18.06:0,18,1008	0/0:16,0:16:33.11:0,33,1539	0/0:19,0:19:45.59:0,46,1913	0/0:22,0:22:63.22:0,63,3649	0/0:17,0:17:42.14:0,42,2558	0/0:23,0:23:63.22:0,63,3715	0/0:27,0:27:72.22:0,72,3258	0/0:12,0:12:33.11:0,33,1770	0/0:14,0:14:42.14:0,42,2400	0/0:13,0:13:30.10:0,30,1835	0/0:30,0:30:87.28:0,87,5249	0/0:11,0:11:33.11:0,33,2098	0/0:23,0:23:63.22:0,63,3886	0/0:19,0:19:51.17:0,51,2806	0/0:22,0:22:63.22:0,63,3835	1/1:2,9:11:27.02:858,27,0	1/1:2,27:29:69.24:2622,69,0	0/0:24,0:24:66.23:0,66,3384	0/0:7,0:7:15.05:0,15,977	0/0:55,0:55:99:0,135,7994	0/0:8,0:8:24.08:0,24,1554	0/0:11,0:11:30.10:0,30,1833	0/0:28,0:28:78.25:0,78,4852	0/0:19,0:19:54.19:0,54,3261	0/0:17,0:17:48.16:0,48,3129	0/0:21,0:21:57.20:0,57,3138	0/0:15,0:15:42.14:0,42,2581
chr10	96659118	.	CGAA	C	16710.51	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=5.560;DP=511;FS=1.399;HRun=0;HaplotypeScore=82.6451;InbreedingCoeff=0.9742;MQ=81.49;MQ0=0;MQRankSum=-5.496;QD=40.76;ReadPosRankSum=4.480;VQSLOD=6.1320;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:31:63.90:1120,64,0	0/0:5,0:5:15.05:0,15,337	0/0:21,0:21:60.20:0,60,1320	0/0:23,0:23:57.20:0,57,1302	0/0:11,0:11:30.10:0,30,692	1/1:0,13:13:36.12:613,36,0	1/1:1,21:22:54.18:919,54,0	1/1:2,19:21:54.18:901,54,0	1/1:0,13:13:36.12:612,36,0	1/1:0,21:21:63.22:1055,63,0	1/1:0,14:14:33.11:561,33,0	1/1:0,14:14:36.12:610,36,0	1/1:0,12:12:33.11:562,33,0	1/1:0,13:13:33.11:562,33,0	0/0:15,0:15:45.15:0,45,1036	1/1:1,22:23:60.21:1020,60,0	1/1:1,43:44:93.31:1582,93,0	1/1:0,30:30:78.27:1328,78,0	1/1:0,23:23:66.12:1039,66,0	1/1:1,4:5:9.03:153,9,0	1/1:0,44:44:96.33:1623,96,0	1/1:1,10:11:30.10:507,30,0	1/1:0,7:7:18.06:306,18,0	1/1:1,23:24:54.18:920,54,0	0/0:11,0:11:33.11:0,33,760	0/0:15,0:15:42.14:0,42,946	1/1:1,13:14:33.11:561,33,0	1/1:0,11:11:9.03:153,9,0
chr10	96659552	.	A	ACGCGCG	2710.67	PASS	AB=0.919;AC=25;AF=0.463;AN=54;BaseQRankSum=6.697;DP=586;FS=21.811;HRun=0;HaplotypeScore=168.9457;InbreedingCoeff=-0.2148;MQ=38.05;MQ0=39;MQRankSum=-2.945;QD=5.79;ReadPosRankSum=4.358;VQSLOD=1.2523;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:40:99:131,0,247	0/0:8,0:7:16.28:0,16,245	0/0:26,0:4:12.04:0,12,249	0/0:18,0:2:3.01:0,3,73	0/0:8,0:8:18.06:0,18,375	1/1:13,0:13:5.75:134,6,0	0/1:45,0:49:72.20:172,0,72	0/1:26,0:23:99:285,0,202	0/1:14,0:15:3.12:124,0,3	0/1:20,0:18:37.67:289,0,38	1/1:14,0:12:0.83:1,1,0	1/1:19,0:19:10.78:261,11,0	0/1:13,0:13:64.20:145,0,64	1/1:16,0:16:2.48:15,2,0	0/0:15,0:15:37.06:0,37,805	0/1:14,0:12:11.90:12,0,19	0/1:40,0:36:99:158,0,209	0/1:13,0:26:32.29:132,0,32	0/1:10,7:15:26.28:463,0,26	./.	0/1:51,0:47:41.69:85,0,42	0/1:17,0:16:28.53:50,0,29	1/1:12,0:11:6.33:44,6,0	0/1:31,0:32:32.56:167,0,33	0/0:8,0:8:18.06:0,18,386	0/0:18,0:17:29.19:0,29,919	0/1:9,1:11:99:134,0,167	0/1:10,1:9:56.29:71,0,56
chr10	96659554	.	A	ACGCG	1358.68	PASS	AB=0.962;AC=21;AF=0.375;AN=56;BaseQRankSum=3.146;DP=585;FS=29.528;HRun=0;HaplotypeScore=165.3144;InbreedingCoeff=-0.2781;MQ=38.12;MQ0=39;MQRankSum=0.709;QD=3.22;ReadPosRankSum=4.295;VQSLOD=1.2401;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:40:66.27:66,0,167	0/0:8,0:7:12.91:0,13,162	0/0:26,0:3:9.03:0,9,145	0/0:19,0:2:6.01:0,6,86	0/0:8,0:8:18.06:0,18,261	1/1:11,1:12:6.02:139,6,0	0/1:41,8:50:99:119,0,116	0/0:26,0:23:6.80:0,7,143	0/1:14,1:15:45.91:61,0,46	0/1:20,1:18:94.85:189,0,95	1/1:12,2:12:0.11:3,0,0	0/1:17,2:19:53.27:173,0,53	0/1:14,0:13:55.90:56,0,69	0/0:14,2:16:1.84:0,2,7	0/0:16,0:16:34.53:0,35,565	1/1:14,0:12:2.99:23,3,0	0/1:39,0:35:79.44:79,0,158	0/1:26,2:26:6.98:219,0,7	0/1:17,0:14:63.85:90,0,64	0/0:17,0:16:2.99:0,3,24	0/1:50,0:46:8.67:9,0,63	0/1:16,1:16:27.52:47,0,28	0/1:12,1:12:13.97:14,0,18	0/1:30,0:30:48.77:123,0,49	0/0:8,0:8:18.06:0,18,285	0/0:19,0:18:41.69:0,42,694	0/1:11,0:11:63.59:64,0,122	0/1:11,0:9:41.41:41,0,44
chr10	96659558	.	A	ACACGCGCACACG	5680.43	PASS	AB=1.000;AC=36;AF=0.667;AN=54;BaseQRankSum=4.483;DP=611;FS=0.000;HRun=0;HaplotypeScore=224.3483;InbreedingCoeff=0.5975;MQ=39.17;MQ0=37;MQRankSum=-2.640;QD=11.83;ReadPosRankSum=-0.226;VQSLOD=3.6655;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:38:10.27:585,0,10	0/0:7,0:6:11.33:0,11,228	0/0:29,0:5:11.98:0,12,195	0/0:22,0:5:14.80:0,15,192	0/0:9,0:9:21.06:0,21,412	1/1:15,0:14:11.57:155,12,0	1/1:50,0:50:25.06:439,25,0	1/1:26,0:23:7.60:395,8,0	1/1:15,0:17:18.80:201,19,0	1/1:22,0:20:50.49:522,50,0	1/1:15,0:14:8.71:73,9,0	1/1:20,0:22:20.07:316,20,0	1/1:14,0:13:32.42:262,32,0	1/1:17,0:17:8.76:70,9,0	0/0:19,0:19:42.57:0,43,951	./.	0/1:39,0:35:30.17:919,0,30	1/1:28,0:26:20.57:247,21,0	0/1:17,0:14:5.17:523,0,5	1/1:19,0:19:8.96:69,9,0	1/1:50,0:46:5.26:203,5,0	1/1:15,0:14:5.23:93,5,0	1/1:14,0:14:14.18:143,14,0	1/1:33,0:32:11.38:98,11,0	0/0:9,0:9:21.06:0,21,434	0/0:18,0:17:17.20:0,17,939	0/1:10,0:10:6.51:187,0,7	1/1:10,0:9:13.63:182,14,0
chr10	96659611	.	CAT	C	10102.97	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=4.091;DP=783;FS=2.031;HRun=0;HaplotypeScore=172.7592;InbreedingCoeff=0.9997;MQ=57.09;MQ0=1;MQRankSum=-1.147;QD=34.02;ReadPosRankSum=2.874;VQSLOD=6.0126;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,111,2023	0/0:10,0:10:29.95:0,30,502	0/0:38,0:34:87.08:0,87,1281	0/0:41,0:31:81.72:0,82,1249	0/0:14,0:14:42.11:0,42,713	1/1:1,18:19:48.13:708,48,0	1/1:1,51:52:99:1545,111,0	0/0:43,0:43:99:0,110,1818	1/1:2,14:16:42.03:587,42,0	1/1:1,30:31:87.23:1185,87,0	1/1:0,14:14:39.05:567,39,0	1/1:3,27:30:74.95:1111,75,0	1/1:1,13:14:37.43:591,37,0	1/1:1,28:29:78.07:1085,78,0	0/0:14,0:14:39.11:0,39,687	0/0:21,0:21:42.14:0,42,810	0/0:38,0:38:99:0,108,1977	0/0:23,1:24:33.91:0,34,835	0/0:22,0:22:66.21:0,66,1154	0/0:23,0:23:54.17:0,54,1008	0/0:74,0:74:99:0,186,3320	1/1:2,26:28:54.61:798,55,0	1/1:0,14:14:39.13:596,39,0	1/1:1,49:50:95.98:1331,96,0	0/0:24,0:24:69.21:0,69,1261	0/0:25,1:26:29.35:0,29,1307	0/0:16,0:16:48.16:0,48,907	0/0:17,0:17:51.15:0,51,929
chr10	96659861	.	CGTGTGT	C	2961.09	PASS	AB=0.739;AC=23;AF=0.442;AN=52;BaseQRankSum=6.058;DP=685;FS=14.198;HRun=0;HaplotypeScore=147.2845;InbreedingCoeff=0.2110;MQ=63.32;MQ0=14;MQRankSum=-7.267;QD=8.51;ReadPosRankSum=0.112;VQSLOD=1.4750;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:38:44.19:0,44,1045	0/0:3,0:3:3.48:0,3,61	./.	./.	0/0:14,0:15:18.04:0,18,400	0/1:15,11:28:42.26:403,0,42	1/1:24,12:37:8.69:168,9,0	0/0:29,0:25:8.54:0,9,49	0/1:5,9:15:31.41:151,0,31	1/1:11,8:22:34.83:472,35,0	0/1:8,1:9:0.54:110,0,1	1/1:11,11:22:0.62:362,1,0	1/1:8,5:15:21.22:344,21,0	0/1:18,4:24:30.35:314,0,30	0/0:27,0:46:51:0,51,1090	0/0:28,0:29:37.23:0,37,748	0/0:15,0:28:26.19:0,26,371	0/0:14,0:23:20.70:0,21,308	1/1:14,0:21:8.90:169,9,0	1/1:7,0:11:3.01:42,3,0	0/1:36,0:50:17.66:57,0,18	0/1:6,8:14:19.16:55,0,19	1/1:6,0:8:9.02:97,9,0	0/1:26,17:41:47.75:166,0,48	0/0:17,0:18:20.99:0,21,399	0/0:24,0:27:50.96:0,51,815	0/1:12,2:15:18.73:150,0,19	0/1:8,0:13:37.82:75,0,38
chr10	96661989	.	GCATGGTTGGGGAGTAC	G	4372.16	PASS	AB=0.989;AC=20;AF=0.357;AN=56;BaseQRankSum=2.537;DP=611;FS=1.235;HRun=0;HaplotypeScore=284.4474;InbreedingCoeff=-0.4012;MQ=60.34;MQ0=2;MQRankSum=-2.843;QD=10.03;ReadPosRankSum=1.125;VQSLOD=3.5266;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:45,0:43:99:866,0,306	0/0:11,0:11:15.05:0,15,564	0/1:30,0:20:10.74:11,0,303	0/0:25,0:20:31.95:0,32,594	0/0:15,0:15:42.12:0,42,1651	0/1:21,0:21:95.39:95,0,879	0/1:31,0:31:61.76:62,0,299	1/1:17,0:17:17.91:142,18,0	0/1:26,0:26:95.64:96,0,792	0/1:21,0:19:99:122,0,293	0/0:14,0:14:11.50:0,12,263	0/1:26,0:26:12.21:12,0,865	0/1:22,0:22:99:142,0,591	0/1:15,0:15:59.14:59,0,558	0/0:26,0:26:54.19:0,54,2487	0/1:14,0:14:99:382,0,141	0/1:36,0:36:99:104,0,2242	0/0:20,0:20:17.06:0,17,773	0/1:19,6:24:58.35:402,0,58	0/1:15,0:15:99:327,0,127	0/1:48,0:46:99:896,0,267	0/1:13,0:13:55.86:77,0,56	0/1:10,0:10:85.50:86,0,152	0/0:28,0:28:24.98:0,25,1665	0/0:14,0:14:24.07:0,24,931	0/0:22,0:22:36.10:0,36,1197	0/1:18,0:18:99:403,0,369	0/1:3,0:3:91.30:91,0,166
chr10	96662004	.	A	AG	2600.97	PASS	AB=0.694;AC=13;AF=0.232;AN=56;BaseQRankSum=7.858;DP=570;FS=8.836;HRun=0;HaplotypeScore=134.5037;InbreedingCoeff=0.7138;MQ=61.49;MQ0=1;MQRankSum=1.058;QD=14.86;ReadPosRankSum=0.699;VQSLOD=4.9422;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,33:41:33.87:733,34,0	0/0:5,0:5:15.03:0,15,192	0/0:26,0:19:33.95:0,34,472	0/0:24,0:19:50.89:0,51,585	0/0:14,0:14:42.14:0,42,587	0/0:20,0:20:55.92:0,56,363	0/0:35,0:35:51.86:0,52,382	0/1:7,2:9:33.44:33,0,40	0/0:27,0:27:72.75:0,73,444	0/0:17,0:15:41.72:0,42,210	0/0:10,0:10:20.19:0,20,124	0/0:23,0:23:60.77:0,61,344	0/0:25,0:25:35.81:0,36,325	0/0:15,0:15:40.60:0,41,242	0/0:22,0:22:57.18:0,57,780	1/1:4,14:18:33.92:398,34,0	0/0:38,0:38:93.81:0,94,501	0/0:15,0:15:39.98:0,40,204	1/1:6,10:16:9.61:337,10,0	0/1:7,10:16:1.44:215,0,1	0/1:22,30:51:81.08:617,0,81	0/0:10,0:10:29:0,29,172	0/0:14,0:14:15.72:0,16,193	0/0:28,0:28:55.91:0,56,315	0/0:11,0:11:33.09:0,33,442	0/0:16,0:16:47.89:0,48,625	1/1:5,9:14:38.91:326,39,0	1/1:1,5:6:7.74:121,8,0
chr10	96662005	.	C	CAG	4555.02	PASS	AB=0.856;AC=16;AF=0.286;AN=56;BaseQRankSum=4.270;DP=580;FS=5.855;HRun=0;HaplotypeScore=141.1938;InbreedingCoeff=0.4908;MQ=61.22;MQ0=1;MQRankSum=-0.260;QD=18.37;ReadPosRankSum=-2.014;VQSLOD=4.5281;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,33:41:42.48:1116,42,0	0/0:5,0:5:15.05:0,15,244	0/1:26,0:20:35.09:35,0,523	0/0:26,0:20:50.58:0,51,685	0/0:14,0:14:42.14:0,42,685	0/0:20,0:20:53.92:0,54,472	0/0:35,0:35:39.55:0,40,556	0/1:8,2:10:66.27:110,0,66	0/1:27,0:27:22.26:22,0,459	0/0:19,0:17:44.46:0,44,315	0/0:9,0:10:20.89:0,21,176	0/0:23,0:23:62.72:0,63,490	0/0:25,0:25:59.84:0,60,503	0/1:16,0:16:4.07:4,0,281	0/0:22,0:22:57.18:0,57,905	1/1:4,14:18:51.13:655,51,0	0/0:38,0:38:84.36:0,84,751	0/0:16,0:16:41.69:0,42,299	1/1:6,10:16:28.19:537,28,0	0/1:10,10:19:21.05:362,0,21	0/1:23,30:52:95:1074,0,95	0/0:11,0:11:29.88:0,30,241	0/0:13,0:13:35.81:0,36,281	0/0:28,0:28:34.73:0,35,449	0/0:11,0:11:33.10:0,33,513	0/0:16,0:16:48.10:0,48,729	1/1:3,9:12:33.10:420,33,0	1/1:2,5:7:18.04:219,18,0
chr10	96662019	.	TAGC	T	1585.25	PASS	AB=0.774;AC=10;AF=0.179;AN=56;BaseQRankSum=5.476;DP=616;FS=12.242;HRun=0;HaplotypeScore=157.1016;InbreedingCoeff=-0.2167;MQ=61.84;MQ0=0;MQRankSum=-7.124;QD=8.05;ReadPosRankSum=-0.796;VQSLOD=2.1674;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,4:37:74.19:0,74,1754	0/0:5,0:5:12.04:0,12,264	0/0:27,0:23:48.12:0,48,1129	0/0:25,0:22:57.18:0,57,1070	0/0:15,0:15:42.13:0,42,893	0/1:14,8:22:99:321,0,861	0/0:33,3:36:31.73:0,32,1730	0/0:26,0:26:75.24:0,75,1590	0/1:17,9:26:99:270,0,1001	0/1:8,9:17:99:375,0,481	0/1:5,3:8:14.80:15,0,274	0/1:23,4:27:71.62:72,0,1239	0/1:18,8:26:99:233,0,855	0/1:13,4:17:99:193,0,565	0/0:20,0:20:54.19:0,54,1184	0/0:25,0:25:66.23:0,66,1471	0/0:34,0:34:90.31:0,90,1991	0/0:16,0:16:39.13:0,39,871	0/0:29,0:29:75.20:0,75,1361	0/0:19,0:18:51.18:0,51,1117	0/0:53,4:56:99:0,102,2487	0/1:11,6:17:99:201,0,460	0/1:11,2:13:11.17:11,0,648	0/1:19,5:24:38:38,0,1086	0/0:13,0:13:39.13:0,39,871	0/0:15,0:15:45.15:0,45,929	0/0:12,0:12:30.09:0,30,625	0/0:6,0:6:18.06:0,18,401
chr10	96664008	.	G	GGTGTGTGTGT	8522.23	PASS	AB=0.882;AC=50;AF=0.962;AN=52;BaseQRankSum=-1.804;DP=786;FS=8.891;HRun=0;HaplotypeScore=263.8365;InbreedingCoeff=-0.0824;MQ=55.11;MQ0=13;MQRankSum=0.252;QD=11.75;ReadPosRankSum=1.764;VQSLOD=2.1146;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:33:18.60:95,0,19	1/1:12,0:18:2.90:91,3,0	./.	./.	1/1:17,0:16:8.88:122,9,0	1/1:17,0:22:11.71:281,12,0	1/1:26,0:25:12.93:239,13,0	1/1:28,0:27:28.79:684,29,0	1/1:24,6:32:6.01:273,6,0	1/1:32,0:37:54.57:1091,55,0	1/1:13,0:13:2.90:48,3,0	1/1:27,0:31:5.98:150,6,0	1/1:17,0:23:13.53:385,14,0	1/1:25,0:28:14.94:654,15,0	1/1:26,0:39:24.08:679,24,0	0/1:26,0:26:3.52:376,0,4	1/1:30,0:39:20.56:377,21,0	1/1:14,0:22:11.30:122,11,0	1/1:29,0:28:18.05:467,18,0	1/1:17,0:15:2.90:42,3,0	1/1:42,0:41:2.60:11,3,0	1/1:21,0:20:9.02:216,9,0	1/1:16,0:17:3.01:93,3,0	1/1:45,0:45:27.05:827,27,0	1/1:22,0:21:5.74:156,6,0	1/1:37,0:38:30.82:635,31,0	1/1:28,0:26:9.44:263,9,0	1/1:15,0:15:5.69:145,6,0
chr10	96664307	.	CGT	C	1030.17	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=-4.443;DP=622;FS=7.263;HRun=0;HaplotypeScore=120.8320;InbreedingCoeff=0.6775;MQ=59.61;MQ0=7;MQRankSum=7.062;QD=9.63;ReadPosRankSum=0.994;VQSLOD=3.1296;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:24:3:0,3,26	1/1:14,2:17:1.54:157,2,0	0/0:19,0:13:3.01:0,3,44	./.	1/1:4,14:18:15.04:170,15,0	0/0:14,0:14:15.03:0,15,169	0/0:35,0:35:5.99:0,6,48	0/0:34,0:33:40.85:0,41,323	0/0:23,0:23:18:0,18,169	0/0:22,0:21:20.74:0,21,171	0/0:14,0:14:6.01:0,6,57	0/0:29,0:29:14.99:0,15,129	0/0:15,0:14:14.94:0,15,123	0/0:21,0:21:11.98:0,12,115	1/1:12,15:27:23.71:231,24,0	0/0:4,0:20:5.59:0,6,52	0/0:30,0:29:14.74:0,15,115	0/0:22,0:23:12:0,12,104	0/0:22,0:21:14.84:0,15,105	0/0:13,0:18:5.94:0,6,41	0/0:26,0:45:6:0,6,53	0/0:15,0:15:6:0,6,51	0/0:18,0:17:12.01:0,12,116	0/0:30,0:30:11.75:0,12,104	1/1:7,15:23:26.90:282,27,0	1/1:8,13:21:35.95:347,36,0	0/0:10,0:21:14.17:0,14,112	0/0:5,0:5:1.25:0,1,3
chr10	96664339	.	T	TGTGTGTGCGCG	5158.79	PASS	AB=0.748;AC=27;AF=0.482;AN=56;BaseQRankSum=5.057;DP=623;FS=0.000;HRun=0;HaplotypeScore=171.1179;InbreedingCoeff=0.0409;MQ=60.64;MQ0=8;MQRankSum=-9.727;QD=10.73;ReadPosRankSum=1.986;VQSLOD=3.7817;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:44.65:136,0,45	0/0:14,0:13:30.06:0,30,599	0/0:9,0:7:12.04:0,12,243	0/0:14,0:6:12.70:0,13,103	0/0:23,0:23:27.09:0,27,677	0/1:1,0:16:32.12:164,0,32	0/1:8,0:41:52.92:100,0,53	0/1:22,0:22:99:448,0,613	1/1:4,0:25:18.53:466,19,0	0/1:6,0:24:99:346,0,226	1/1:3,0:15:6.02:148,6,0	0/1:4,0:31:54.32:265,0,54	1/1:3,0:21:7.88:248,8,0	0/1:1,0:25:33.50:165,0,33	0/0:33,0:33:66.23:0,66,1573	1/1:11,0:13:12.34:243,12,0	1/1:6,1:28:24.06:861,24,0	1/1:6,0:26:24:830,24,0	0/1:16,0:13:99:108,0,322	0/1:15,0:14:47.84:48,0,74	0/1:33,0:33:8.45:8,0,407	0/1:5,0:21:22.68:78,0,23	0/1:2,0:25:0.76:185,0,1	1/1:5,0:42:5.70:145,6,0	0/0:24,0:24:48.16:0,48,1182	0/0:21,0:21:57.15:0,57,1123	0/1:19,0:19:99:167,0,310	0/0:4,0:3:4.57:0,5,66
chr10	96667078	.	CTGTGTGTGTGTG	C	2070.18	PASS	AB=0.958;AC=12;AF=0.222;AN=54;BaseQRankSum=5.018;DP=636;FS=12.135;HRun=0;HaplotypeScore=219.9954;InbreedingCoeff=0.6369;MQ=60.23;MQ0=16;MQRankSum=-4.980;QD=13.89;ReadPosRankSum=0.754;VQSLOD=1.3818;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:48.10:0,48,1990	0/0:4,0:4:2.92:0,3,17	./.	0/0:37,0:21:2.51:0,3,7	0/0:11,0:13:3.01:0,3,134	0/0:28,0:25:36.12:0,36,1653	0/0:31,0:31:36.12:0,36,1318	1/1:30,0:28:5.97:48,6,0	0/0:15,0:18:39.13:0,39,1798	0/0:23,0:23:27.08:0,27,896	0/0:19,0:19:24.08:0,24,1095	0/0:13,0:13:27.09:0,27,1193	0/0:18,0:20:27.08:0,27,1176	0/0:21,0:20:36.12:0,36,1607	0/0:18,0:27:19.88:0,20,719	0/0:13,0:21:27.56:0,28,1216	0/1:23,0:23:3.22:86,0,3	0/1:20,2:22:90.28:254,0,90	0/0:11,0:11:2.04:0,2,6	1/1:7,4:12:15.05:292,15,0	1/1:32,0:31:5.81:107,6,0	0/0:19,0:19:24.08:0,24,1230	0/0:20,0:20:30.10:0,30,1364	0/0:31,0:33:72.24:0,72,3207	0/0:11,0:22:14.92:0,15,524	0/0:22,0:21:30.99:0,31,1313	1/1:12,13:24:36.12:1237,36,0	1/1:2,2:4:6.02:206,6,0
chr10	96667270	.	TGG	T	6687.10	PASS	AB=0.714;AC=29;AF=0.518;AN=56;BaseQRankSum=-4.777;DP=589;FS=9.680;HRun=11;HaplotypeScore=84.6144;InbreedingCoeff=0.7583;MQ=74.76;MQ0=0;MQRankSum=-0.965;QD=18.37;ReadPosRankSum=7.697;VQSLOD=2.7069;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,27:33:63.13:664,63,0	0/0:4,0:8:13.09:0,13,81	0/0:25,0:24:39.87:0,40,500	0/0:16,0:16:7.87:0,8,311	0/1:14,1:20:11.46:11,0,40	1/1:2,17:19:48.12:510,48,0	1/1:6,16:22:38.82:395,39,0	0/0:21,0:22:29.72:0,30,361	1/1:4,24:28:66.15:702,66,0	1/1:8,16:25:51.11:542,51,0	1/1:5,10:15:24.03:255,24,0	1/1:10,16:26:51.10:543,51,0	1/1:8,17:26:50.84:523,51,0	1/1:2,18:20:45.10:479,45,0	0/1:9,2:24:37.41:37,0,43	1/1:5,21:28:65.63:662,66,0	0/0:11,0:24:21.04:0,21,218	0/0:11,0:25:8.77:0,9,161	0/0:12,0:12:12.01:0,12,153	0/0:16,0:16:21.04:0,21,277	0/0:22,0:22:17.60:0,18,176	1/1:2,13:15:39.10:414,39,0	1/1:7,17:24:43.86:452,44,0	1/1:1,19:21:45.11:479,45,0	0/1:11,1:16:18.45:18,0,42	0/0:13,0:20:15.87:0,16,74	0/0:24,0:25:43.69:0,44,496	0/0:7,0:8:15.04:0,15,208
chr10	96667280	.	GGT	G	1630.58	PASS	AB=0.964;AC=17;AF=0.304;AN=56;BaseQRankSum=7.702;DP=522;FS=7.807;HRun=0;HaplotypeScore=93.2711;InbreedingCoeff=0.1086;MQ=76.32;MQ0=0;MQRankSum=-1.847;QD=5.35;ReadPosRankSum=11.542;VQSLOD=0.0843;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:34,1:35:65.63:232,0,66	0/0:6,0:6:8.52:0,9,94	0/0:24,0:23:50.34:0,50,599	0/1:14,0:14:34.63:35,0,335	0/0:11,0:11:18.18:0,18,120	0/1:19,1:20:1.97:136,0,2	0/1:22,2:24:78.69:100,0,79	0/0:24,1:25:57.04:0,57,655	1/1:26,0:26:17.38:169,17,0	0/1:20,0:20:10.57:112,0,11	0/1:15,1:16:63.38:71,0,63	0/1:19,1:20:21.59:126,0,22	0/1:20,1:21:4.49:161,0,4	1/1:19,0:19:17.82:145,18,0	0/0:19,0:18:17.02:0,17,159	1/1:26,1:26:8.29:165,8,0	0/0:20,0:20:32.66:0,33,311	0/0:14,0:14:20.72:0,21,205	0/0:9,0:9:18.02:0,18,225	0/0:10,0:10:24.07:0,24,358	0/0:19,0:19:30.64:0,31,354	0/1:16,1:17:31.91:112,0,32	0/1:22,1:23:21.84:115,0,22	0/1:23,0:23:23.64:125,0,24	0/0:16,0:16:4.01:0,4,179	0/0:14,0:14:28.61:0,29,210	0/0:21,0:21:45.58:0,46,607	0/0:7,0:7:15.05:0,15,236
chr10	96668601	.	TA	T	2435.15	PASS	AB=0.895;AC=9;AF=0.161;AN=56;BaseQRankSum=12.134;DP=651;FS=3.300;HRun=11;HaplotypeScore=75.5963;InbreedingCoeff=0.8160;MQ=71.91;MQ0=0;MQRankSum=-0.938;QD=16.68;ReadPosRankSum=2.258;VQSLOD=4.7996;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,37:41:95.86:788,96,0	0/0:17,0:17:39.08:0,39,404	0/0:21,0:20:3.33:0,3,255	0/0:12,0:11:8.88:0,9,90	0/0:25,0:26:60.44:0,60,610	0/0:25,2:27:38.51:0,39,609	0/0:16,0:16:44.99:0,45,447	0/0:34,1:36:56.55:0,57,799	0/0:17,1:18:17.45:0,17,384	0/0:22,1:23:34.64:0,35,519	0/0:23,0:23:54.12:0,54,559	0/0:22,1:23:35.49:0,35,573	0/0:14,0:14:36.08:0,36,377	0/0:16,0:16:14.80:0,15,351	0/0:34,0:34:93.18:0,93,954	1/1:2,22:24:65.92:542,66,0	1/1:3,29:32:83.88:685,84,0	1/1:6,26:32:58.02:573,58,0	0/1:15,2:17:10.34:10,0,283	0/0:26,1:27:47.56:0,48,709	0/0:13,0:14:32.90:0,33,325	0/0:15,1:16:20.60:0,21,415	0/0:29,1:30:41.50:0,42,636	0/0:19,1:20:24.72:0,25,458	0/0:23,0:23:59.96:0,60,608	0/0:29,0:29:73.41:0,73,759	0/0:26,0:26:69.16:0,69,728	0/0:13,1:14:14.46:0,14,359
chr10	96670738	.	GA	G	8187.55	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=17.875;DP=605;FS=3.109;HRun=2;HaplotypeScore=132.4551;InbreedingCoeff=0.9904;MQ=78.94;MQ0=0;MQRankSum=-5.884;QD=34.40;ReadPosRankSum=2.895;VQSLOD=4.3905;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1436	0/0:6,0:6:18.05:0,18,250	0/0:15,0:15:44.85:0,45,582	0/0:19,0:19:47.08:0,47,594	0/0:18,0:18:51.16:0,51,743	1/1:1,17:18:45.15:580,45,0	1/1:2,29:31:84.27:1078,84,0	0/0:28,0:28:84.27:0,84,1224	1/1:1,23:24:69.22:893,69,0	1/1:1,17:18:51.17:660,51,0	1/1:0,17:17:48.15:605,48,0	1/1:2,18:20:51.17:661,51,0	1/1:0,21:21:57.19:739,57,0	1/1:0,29:29:87.28:1128,87,0	0/0:20,0:20:60.19:0,60,881	0/0:21,1:22:27.27:0,27,885	0/0:32,0:32:96.30:0,96,1411	0/0:27,0:27:81.26:0,81,1188	0/0:29,0:29:87.27:0,87,1247	0/0:19,0:19:57.16:0,57,780	0/0:39,0:39:99:0,114,1646	1/1:0,22:22:54.17:685,54,0	1/1:2,14:16:42.14:536,42,0	1/1:2,20:22:48.11:623,48,0	0/0:15,0:15:45.15:0,45,673	0/0:23,0:23:66.22:0,66,987	0/0:19,0:19:54.18:0,54,799	0/0:3,0:3:9.03:0,9,135
chr10	96673123	.	C	CT	5918.06	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=-13.372;DP=574;FS=2.393;HRun=9;HaplotypeScore=62.8181;InbreedingCoeff=0.8605;MQ=71.99;MQ0=0;MQRankSum=0.005;QD=25.96;ReadPosRankSum=0.260;VQSLOD=5.4559;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:31:42.77:0,43,125	0/0:12,0:12:29.99:0,30,260	0/1:11,0:12:12.68:13,0,93	0/1:8,0:8:12.39:12,0,106	0/0:31,0:31:89.96:0,90,775	1/1:4,24:28:43.13:704,43,0	1/1:1,19:20:57.15:631,57,0	0/0:26,0:26:62.96:0,63,542	1/1:1,20:21:57.15:630,57,0	1/1:2,17:19:25.08:505,25,0	1/1:2,14:16:39.11:431,39,0	1/1:1,15:16:39.11:431,39,0	1/1:4,15:19:21.91:471,22,0	1/1:0,13:13:36.10:398,36,0	0/0:15,0:15:44.99:0,45,391	0/0:0,0:29:59.08:0,59,174	0/0:2,0:26:42.77:0,43,126	0/0:6,0:24:30.54:0,31,90	0/0:22,0:22:29.44:0,29,415	0/0:28,0:28:77.95:0,78,674	0/0:14,0:14:41.99:0,42,365	1/1:0,23:23:69.19:763,69,0	1/1:2,18:20:54.15:596,54,0	1/1:2,11:13:30.08:332,30,0	0/0:27,0:28:80:0,80,678	0/0:26,0:26:74.97:0,75,649	0/0:25,0:25:62.98:0,63,547	0/0:9,0:9:26.99:0,27,234
chr10	96674164	.	G	GTCGTTATTTTAAATA	31365.33	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=2.445;DP=571;FS=4.435;HRun=0;HaplotypeScore=234.0074;InbreedingCoeff=0.9427;MQ=78.94;MQ0=0;MQRankSum=-10.750;QD=71.45;ReadPosRankSum=-2.357;VQSLOD=4.2110;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:36,4:40:52.40:2688,52,0	0/0:7,0:7:11.58:0,12,509	0/0:18,0:18:24.03:0,24,755	0/0:22,0:22:35.92:0,36,942	0/0:14,0:14:33.10:0,33,1216	1/1:24,4:28:42.12:2078,42,0	1/1:22,1:23:30.10:1604,30,0	1/1:31,0:31:27.09:1683,27,0	1/1:21,3:24:27.09:1239,27,0	1/1:25,0:25:30.04:827,30,0	1/1:12,6:18:42.14:2300,42,0	1/1:18,2:20:24.08:1430,24,0	1/1:12,4:16:18.06:1175,18,0	1/1:12,2:14:18.06:997,18,0	0/0:14,0:14:30.10:0,30,1170	1/1:17,1:18:12.03:504,12,0	1/1:20,2:22:24.08:1221,24,0	1/1:13,1:14:9.03:366,9,0	1/1:23,6:28:57.20:2751,57,0	1/1:12,7:19:45.15:2895,45,0	1/1:8,1:9:6.02:343,6,0	1/1:8,9:17:42.14:2741,42,0	1/1:20,1:21:25.33:777,25,0	1/1:12,3:15:18.06:1130,18,0	0/0:20,0:20:54.16:0,54,1877	0/0:37,0:37:75.26:0,75,2987	1/1:19,7:26:33.11:1967,33,0	1/1:7,3:10:9.03:650,9,0
chr10	96674218	.	C	CA	14795.43	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-0.815;DP=471;FS=7.629;HRun=0;HaplotypeScore=82.4723;InbreedingCoeff=0.9943;MQ=68.96;MQ0=1;MQRankSum=-5.322;QD=42.39;ReadPosRankSum=2.434;VQSLOD=5.3171;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:81.27:1277,81,0	0/0:10,0:10:30.10:0,30,419	0/0:20,0:19:50.16:0,50,628	0/0:18,0:17:48.07:0,48,605	0/0:21,0:21:57.18:0,57,779	1/1:0,11:11:33.11:526,33,0	1/1:0,17:17:48.16:766,48,0	1/1:0,29:29:87.28:1359,87,0	1/1:0,15:15:36.12:575,36,0	1/1:0,16:16:48.16:764,48,0	1/1:0,19:19:51.17:813,51,0	1/1:1,13:14:39.13:622,39,0	1/1:1,9:10:27.09:431,27,0	1/1:1,7:8:21.07:332,21,0	0/0:13,0:13:39.13:0,39,545	1/1:0,15:15:45.15:719,45,0	1/1:0,22:22:54.18:847,54,0	1/1:0,21:21:54.18:863,54,0	1/1:0,19:19:57.19:911,57,0	1/1:0,22:22:54.18:863,54,0	1/1:0,7:7:18.06:287,18,0	1/1:3,8:11:27.08:408,27,0	1/1:0,20:20:57.19:910,57,0	1/1:0,15:15:30.10:468,30,0	0/0:19,0:19:57.16:0,57,774	0/0:21,0:21:63.21:0,63,878	1/1:0,21:21:51.02:815,51,0	1/1:0,5:5:15.05:240,15,0
chr10	96674313	.	GAA	G	5293.81	PASS	AB=0.960;AC=31;AF=0.554;AN=56;BaseQRankSum=9.696;DP=415;FS=11.225;HRun=10;HaplotypeScore=148.2582;InbreedingCoeff=0.9274;MQ=66.98;MQ0=5;MQRankSum=-11.868;QD=24.40;ReadPosRankSum=3.688;VQSLOD=3.0521;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:51.11:564,51,0	0/0:0,0:8:19.96:0,20,69	0/0:27,0:16:8.80:0,9,221	0/1:22,0:11:0.29:0,0,19	0/0:8,0:21:44.74:0,45,168	1/1:3,16:19:51.10:554,51,0	1/1:1,10:11:30.08:334,30,0	0/0:41,0:42:99:0,105,1562	1/1:1,10:11:30.08:332,30,0	1/1:1,20:21:60.15:666,60,0	1/1:1,15:16:42.11:466,42,0	1/1:3,9:12:27.06:299,27,0	1/1:2,4:6:9.02:100,9,0	1/1:1,7:8:21.06:234,21,0	0/0:2,0:8:20.21:0,20,72	1/1:3,2:5:12.01:123,12,0	1/1:1,11:12:30.07:330,30,0	1/1:5,10:15:35.95:368,36,0	0/0:14,0:14:36.11:0,36,550	0/0:14,0:14:36.12:0,36,552	0/0:5,0:5:12.01:0,12,164	1/1:3,10:13:30.08:333,30,0	1/1:0,17:17:45.11:496,45,0	1/1:4,2:6:9.02:95,9,0	0/0:3,0:16:34.81:0,35,120	0/0:3,0:19:45.22:0,45,159	0/0:13,0:13:30.10:0,30,473	0/0:9,0:9:27.09:0,27,429
chr10	96674328	.	GT	G	303.01	PASS	AB=0.770;AC=4;AF=0.071;AN=56;BaseQRankSum=-1.384;DP=407;FS=0.840;HRun=8;HaplotypeScore=168.9951;InbreedingCoeff=-0.0359;MQ=61.77;MQ0=4;MQRankSum=-4.181;QD=4.39;ReadPosRankSum=-0.358;VQSLOD=-0.1667;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,9:20:27.34:169,0,27	0/0:8,0:8:18.06:0,18,217	0/0:28,0:14:32.44:0,32,280	0/1:24,0:11:7.13:7,0,62	0/0:16,0:16:36.11:0,36,427	0/0:17,0:17:43.01:0,43,263	0/0:11,0:11:28.53:0,29,160	0/0:38,0:38:92.31:0,92,1090	0/0:10,0:10:25.65:0,26,146	0/0:22,0:22:57.54:0,58,331	0/0:16,0:16:38.61:0,39,204	0/0:9,0:9:22.68:0,23,112	0/0:6,0:6:14.24:0,14,73	0/0:8,0:8:22.78:0,23,139	0/0:9,0:9:21.06:0,21,254	0/0:4,0:4:6.38:0,6,23	0/1:8,5:13:22.30:89,0,22	0/1:6,6:12:10.36:143,0,10	0/0:22,0:22:39.04:0,39,438	0/0:13,0:13:36.11:0,36,434	0/0:7,0:7:15.05:0,15,181	0/0:11,0:11:28.61:0,29,165	0/0:17,0:17:30.35:0,30,166	0/0:5,0:5:9.35:0,9,45	0/0:14,0:14:39.11:0,39,460	0/0:19,0:19:39.09:0,39,456	0/0:16,0:16:48.15:0,48,580	0/0:12,0:12:36.11:0,36,434
chr10	96674330	.	T	TTTTTTTCC	12146.16	PASS	AB=0.727;AC=27;AF=0.482;AN=56;BaseQRankSum=5.696;DP=450;FS=8.895;HRun=0;HaplotypeScore=204.0707;InbreedingCoeff=0.7568;MQ=59.25;MQ0=4;MQRankSum=-9.877;QD=54.47;ReadPosRankSum=1.140;VQSLOD=3.3811;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:27:44.49:811,0,44	0/0:7,0:7:18.06:0,18,431	0/0:28,0:14:24.02:0,24,239	0/0:24,0:11:4.75:0,5,61	0/0:17,0:17:39.08:0,39,882	1/1:14,6:20:48.03:1276,48,0	1/1:11,3:14:36.08:884,36,0	0/0:38,0:38:85.35:0,85,1319	1/1:10,4:14:33.04:847,33,0	1/1:22,6:28:78.16:1822,78,0	1/1:11,6:17:45.07:1118,45,0	1/1:7,4:12:33.04:917,33,0	1/1:4,3:7:18.06:586,18,0	1/1:8,2:10:27.07:598,27,0	0/0:9,0:9:24.04:0,24,490	1/1:3,0:6:18.06:312,18,0	0/1:9,0:15:41.46:357,0,41	0/1:9,0:14:57.92:326,0,58	0/0:23,0:23:42.03:0,42,793	0/0:13,0:13:36.06:0,36,748	0/0:7,0:7:15.05:0,15,388	1/1:11,3:14:30.01:715,30,0	1/1:15,5:20:48.16:1271,48,0	1/1:2,3:5:11.83:306,12,0	0/0:14,0:14:39.09:0,39,843	0/0:19,0:19:39.11:0,39,639	0/0:16,0:16:48.16:0,48,1091	0/0:12,0:12:36.12:0,36,766
chr10	96674336	.	T	TC	2831.89	PASS	AB=0.784;AC=17;AF=0.304;AN=56;BaseQRankSum=5.841;DP=435;FS=2.423;HRun=1;HaplotypeScore=167.8458;InbreedingCoeff=0.2610;MQ=59.03;MQ0=4;MQRankSum=-5.588;QD=14.60;ReadPosRankSum=3.769;VQSLOD=3.8366;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:57.80:0,58,277	0/0:6,0:6:18.06:0,18,231	0/0:24,0:14:23.55:0,24,235	0/1:24,0:11:16.83:17,0,44	0/0:16,0:16:44.78:0,45,478	1/1:10,8:18:8.51:339,9,0	0/1:9,6:15:21.01:276,0,21	0/0:35,0:35:87.15:0,87,1057	0/1:11,4:15:25.14:213,0,25	0/1:17,11:29:90.78:533,0,91	1/1:11,7:18:9.60:367,10,0	0/1:9,2:11:29.39:167,0,29	0/1:4,3:7:1.20:113,0,1	1/1:6,4:10:6.90:232,7,0	0/0:9,0:9:27.01:0,27,311	0/1:6,0:7:11.19:11,0,48	0/0:13,0:13:28.63:0,29,123	0/0:15,0:15:41.90:0,42,218	0/0:20,0:20:47.94:0,48,525	0/0:13,0:13:36.05:0,36,419	0/0:6,0:6:15.05:0,15,194	0/1:8,6:14:7.15:239,0,7	0/1:13,8:21:25.99:400,0,26	1/1:4,1:5:13.66:100,14,0	0/0:13,0:13:39.08:0,39,474	0/0:13,0:13:39.08:0,39,462	0/0:17,0:17:51.10:0,51,635	0/0:12,0:12:36.12:0,36,464
chr10	96674379	.	AG	A	11836.11	PASS	AB=1.000;AC=53;AF=0.981;AN=54;BaseQRankSum=-1.153;DP=409;FS=0.000;HRun=4;HaplotypeScore=117.0736;InbreedingCoeff=0.1374;MQ=46.85;MQ0=4;MQRankSum=-0.216;QD=29.30;ReadPosRankSum=2.428;VQSLOD=3.8470;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:51.15:601,51,0	1/1:0,6:6:18.05:215,18,0	0/1:4,0:3:9.39:9,0,33	./.	1/1:2,22:24:54.16:632,54,0	1/1:0,13:13:33.10:390,33,0	1/1:1,9:10:12.04:144,12,0	1/1:2,17:19:48.15:574,48,0	1/1:1,17:18:45.14:537,45,0	1/1:1,20:21:57.16:667,57,0	1/1:2,10:12:30.09:353,30,0	1/1:0,17:17:48.15:573,48,0	1/1:1,10:10:27.08:322,27,0	1/1:0,13:13:27.08:323,27,0	1/1:0,14:14:42.13:494,42,0	1/1:0,10:10:27.08:323,27,0	1/1:2,16:18:48.14:572,48,0	1/1:1,19:20:57.17:684,57,0	1/1:4,12:14:36.11:432,36,0	1/1:0,23:23:54.17:648,54,0	1/1:0,16:16:42.13:504,42,0	1/1:1,15:16:36.11:430,36,0	1/1:1,16:17:42.13:501,42,0	1/1:3,5:8:11.99:128,12,0	1/1:2,13:15:39.11:454,39,0	1/1:1,13:14:37.77:466,38,0	1/1:0,24:24:60.18:719,60,0	1/1:0,4:4:12.04:144,12,0
chr10	96674874	.	CATACATGAGATAA	C	21639.19	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=8.627;DP=489;FS=37.467;HRun=0;HaplotypeScore=227.1652;InbreedingCoeff=0.9678;MQ=74.63;MQ0=0;MQRankSum=-12.312;QD=73.60;ReadPosRankSum=4.538;VQSLOD=2.7750;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,8:12:15.05:599,15,0	1/1:1,6:7:21.06:745,21,0	0/0:28,0:27:78.27:0,78,3767	0/0:12,0:12:33.11:0,33,1476	1/1:9,12:21:27.56:917,28,0	1/1:6,10:16:30.09:1026,30,0	1/1:4,7:11:27.07:890,27,0	0/0:37,0:37:99:0,111,6343	1/1:5,8:13:24.55:832,25,0	1/1:8,17:25:57.19:2110,57,0	1/1:5,12:17:30.10:1131,30,0	1/1:8,6:14:24.07:796,24,0	1/1:6,11:16:33.10:1223,33,0	1/1:2,8:10:24.08:958,24,0	1/1:5,21:25:63.20:2374,63,0	1/1:6,14:20:45.15:1685,45,0	1/1:5,8:13:24.08:908,24,0	1/1:1,6:7:12.04:479,12,0	0/0:29,0:29:81.26:0,81,3991	0/0:28,0:28:78.27:0,78,5020	0/0:20,0:19:44.73:0,45,2620	1/1:6,9:15:27.09:1011,27,0	1/1:3,7:10:18.06:719,18,0	1/1:3,4:7:14.98:401,15,0	1/1:3,11:14:30.10:1198,30,0	1/1:6,13:18:45.15:1637,45,0	0/0:39,0:39:93.15:0,93,5223	0/0:2,0:2:6.02:0,6,352
chr10	96674900	.	T	TAA	5960.20	PASS	AB=0.860;AC=41;AF=0.732;AN=56;BaseQRankSum=0.041;DP=541;FS=3.814;HRun=12;HaplotypeScore=211.4522;InbreedingCoeff=0.7555;MQ=59.30;MQ0=0;MQRankSum=-5.972;QD=15.13;ReadPosRankSum=-2.000;VQSLOD=0.9456;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:22:32.44:112,32,0	1/1:2,0:8:12.48:43,12,0	0/1:19,0:15:41.32:41,0,77	0/1:15,0:11:2.53:3,0,49	1/1:11,1:23:28.41:138,28,0	1/1:5,8:14:23.57:303,24,0	1/1:3,7:11:21.06:279,21,0	0/0:16,0:35:34.80:0,35,190	1/1:3,8:12:27.09:367,27,0	1/1:10,22:33:68.72:930,69,0	1/1:12,13:26:48.10:625,48,0	1/1:3,8:12:29.59:387,30,0	1/1:2,15:18:41.63:555,42,0	1/1:3,9:13:24.08:336,24,0	1/1:10,0:28:17.66:119,18,0	1/1:1,0:19:44.92:155,45,0	0/1:5,0:18:4.79:46,0,5	1/1:6,0:11:15.45:64,15,0	0/0:4,0:21:46.41:0,46,199	0/0:5,0:34:75.17:0,75,321	0/0:5,0:12:16.45:0,16,71	1/1:7,10:17:30.05:393,30,0	1/1:3,11:14:33.11:461,33,0	1/1:2,8:9:15.05:210,15,0	1/1:2,0:17:32.44:112,32,0	1/1:6,1:32:57.70:280,58,0	0/0:7,0:41:77.68:0,78,336	0/0:0,0:3:8.23:0,8,36
chr10	96675055	.	A	ACTGTGGATCGCG	14154.95	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=0.494;DP=560;FS=8.465;HRun=0;HaplotypeScore=193.4434;InbreedingCoeff=0.9868;MQ=82.92;MQ0=0;MQRankSum=-11.679;QD=106.43;ReadPosRankSum=-2.228;VQSLOD=3.7601;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.28:0,81,2899	0/0:7,0:7:21.07:0,21,729	0/0:25,0:25:57.17:0,57,1800	0/0:15,0:15:39.11:0,39,1251	0/0:22,0:22:54.17:0,54,1852	0/0:24,0:24:66.23:0,66,2268	0/0:21,0:21:60.21:0,60,2210	1/1:33,2:41:99:4360,109,0	0/0:19,0:19:57.20:0,57,2029	0/0:29,0:29:84.25:0,84,3035	0/0:19,0:19:51.16:0,51,1714	0/0:24,0:24:69.24:0,69,2508	0/0:16,0:16:48.16:0,48,1753	0/0:15,0:15:39.13:0,39,1442	0/0:20,0:20:48.16:0,48,1723	0/0:18,0:18:45.14:0,45,1546	0/0:15,0:15:45.08:0,45,1394	0/0:13,0:13:33.11:0,33,1114	1/1:15,6:21:48.16:2227,48,0	1/1:14,10:24:45.14:2517,45,0	1/1:9,1:12:9.03:525,9,0	0/0:21,0:21:57.18:0,57,1989	0/0:17,0:17:48.15:0,48,1569	0/0:25,0:25:75.26:0,75,2675	0/0:14,0:14:39.13:0,39,1403	0/0:19,0:19:57.20:0,57,2031	1/1:15,8:26:63.22:3055,63,0	1/1:2,6:8:24.08:1472,24,0
chr10	96675209	.	T	TG	5513.59	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.481;DP=619;FS=1.206;HRun=0;HaplotypeScore=84.5619;InbreedingCoeff=0.9983;MQ=89.03;MQ0=0;MQRankSum=-1.546;QD=42.09;ReadPosRankSum=-0.846;VQSLOD=4.9399;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.25:0,87,1178	0/0:12,0:12:36.09:0,36,481	0/0:25,0:25:74.89:0,75,986	0/0:24,0:24:72.14:0,72,936	0/0:22,0:22:60.08:0,60,760	0/0:28,0:28:84.27:0,84,1159	0/0:16,0:16:48.15:0,48,654	1/1:3,25:28:81.18:1203,81,0	0/0:25,0:25:75.25:0,75,1048	0/0:28,0:28:84.27:0,84,1159	0/0:23,0:23:60.16:0,60,816	0/0:20,0:20:57.19:0,57,795	0/0:24,0:24:72.21:0,72,972	0/0:21,0:21:57.18:0,57,780	0/0:25,0:25:69.22:0,69,946	0/0:18,0:18:54.18:0,54,754	0/0:25,0:25:75.18:0,75,1006	0/0:18,0:18:51.17:0,51,713	1/1:1,20:21:60.18:930,60,0	1/1:1,26:27:72.25:1150,72,0	1/1:0,30:30:72.25:1148,72,0	0/0:22,0:22:66.18:0,66,898	0/0:15,0:15:45.15:0,45,628	0/0:26,0:26:75.15:0,75,1005	0/0:15,0:15:45.14:0,45,601	0/0:27,0:27:78.25:0,78,1059	1/1:1,15:17:51.17:795,51,0	1/1:0,8:8:18.06:288,18,0
chr10	96675360	.	C	CT	9220.43	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=7.539;DP=633;FS=4.540;HRun=1;HaplotypeScore=166.9863;InbreedingCoeff=0.9090;MQ=79.80;MQ0=1;MQRankSum=-4.717;QD=19.66;ReadPosRankSum=1.471;VQSLOD=5.0323;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:36,7:43:99:1046,103,0	1/1:3,5:8:22.33:144,22,0	0/0:31,0:31:88.46:0,88,1145	0/0:30,0:29:42.97:0,43,792	1/1:11,7:17:37.86:292,38,0	1/1:17,4:21:49.49:487,49,0	1/1:11,12:23:50.83:404,51,0	0/1:32,0:32:15.37:15,0,440	1/1:11,3:14:26.81:229,27,0	1/1:13,8:21:42.29:377,42,0	1/1:14,4:18:38.20:292,38,0	1/1:17,5:22:51.02:458,51,0	1/1:15,5:20:40.30:423,40,0	1/1:13,12:25:51.36:441,51,0	1/1:24,10:34:85.55:774,86,0	1/1:12,7:19:48.44:449,48,0	1/1:20,7:27:71.30:633,71,0	1/1:10,4:14:41.71:352,42,0	0/0:16,0:16:18.16:0,18,291	0/0:21,0:21:23.02:0,23,350	0/0:23,0:23:47.88:0,48,468	1/1:19,6:25:59.48:537,59,0	1/1:19,2:21:46.48:449,46,0	1/1:18,5:23:56.03:492,56,0	1/1:16,4:20:46.04:453,46,0	1/1:17,4:21:40.72:473,41,0	0/0:28,0:27:71.80:0,72,608	0/0:15,0:15:41.83:0,42,345
chr10	96675365	.	CCA	C	5370.86	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-8.669;DP=615;FS=40.000;HRun=0;HaplotypeScore=188.6486;InbreedingCoeff=-0.0909;MQ=79.75;MQ0=1;MQRankSum=3.177;QD=11.53;ReadPosRankSum=-4.533;VQSLOD=2.0770;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:41:22.71:189,0,23	0/0:8,0:8:18.26:0,18,91	0/0:27,0:27:71.16:0,71,1175	0/0:33,0:32:69.79:0,70,1271	0/1:17,0:16:14.51:15,0,77	0/1:18,0:18:25.37:25,0,38	0/1:23,0:23:32.86:33,0,129	1/1:1,29:30:80.77:1002,81,0	0/1:15,0:15:5.98:6,0,76	0/1:22,0:22:36.59:37,0,115	0/1:18,0:18:14.36:14,0,52	0/0:21,0:21:15.87:0,16,128	0/1:20,0:20:35.88:36,0,83	0/0:25,0:25:27.81:0,28,170	0/1:36,0:36:39.39:39,0,155	0/1:17,0:17:25.48:25,0,93	0/1:26,0:26:14.37:14,0,88	0/0:14,0:14:0.87:0,1,36	1/1:0,16:16:47.93:645,48,0	1/1:1,21:22:63.12:859,63,0	1/1:2,22:24:48.16:698,48,0	0/1:22,0:22:29.91:30,0,67	0/1:16,0:16:26.78:52,0,27	0/0:21,0:21:9.85:0,10,81	0/1:20,0:20:29.20:29,0,80	0/1:21,0:21:36.57:37,0,60	1/1:1,26:26:66.22:971,66,0	1/1:0,15:15:42.14:616,42,0
chr10	96675369	.	CA	C	8565.68	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=11.526;DP=607;FS=7.203;HRun=1;HaplotypeScore=166.6344;InbreedingCoeff=0.9991;MQ=79.46;MQ0=1;MQRankSum=-8.178;QD=20.59;ReadPosRankSum=1.997;VQSLOD=4.6292;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,10:35:93.29:844,93,0	1/1:3,5:8:20.75:123,21,0	0/0:27,0:27:78.16:0,78,1158	0/0:31,1:31:63.90:0,64,1245	1/1:13,8:20:45.68:350,46,0	1/1:13,5:18:46.85:480,47,0	1/1:10,13:23:50.93:406,51,0	0/0:30,1:30:77.61:0,78,630	1/1:12,4:16:39.14:330,39,0	1/1:15,9:24:53.44:463,53,0	1/1:12,4:16:40.71:341,41,0	1/1:18,5:23:60.42:492,60,0	1/1:13,6:19:41.90:378,42,0	1/1:13,13:26:66.49:476,66,0	1/1:24,11:35:90.37:806,90,0	1/1:7,7:14:33.06:246,33,0	1/1:17,8:25:58.05:484,58,0	1/1:8,5:13:35.46:263,35,0	0/0:17,0:17:50.35:0,50,376	0/0:21,0:21:58.71:0,59,380	0/0:23,0:23:47.70:0,48,362	1/1:13,8:21:49.50:424,49,0	1/1:13,2:15:38.68:339,39,0	1/1:18,6:24:54.60:475,55,0	1/1:12,5:17:41.24:314,41,0	1/1:17,6:23:54.26:533,54,0	0/0:25,0:24:68.17:0,68,480	0/0:15,0:15:41.37:0,41,277
chr10	96675699	.	T	TA	5879.77	PASS	AB=0.720;AC=41;AF=0.732;AN=56;BaseQRankSum=-0.150;DP=606;FS=0.000;HRun=12;HaplotypeScore=108.2733;InbreedingCoeff=0.7723;MQ=65.60;MQ0=3;MQRankSum=-2.279;QD=13.15;ReadPosRankSum=-1.236;VQSLOD=4.2343;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,1:30:39.77:199,40,0	0/0:12,0:13:37.83:0,38,268	0/0:31,0:23:15.27:0,15,128	0/1:20,0:14:3.59:4,0,35	0/0:26,0:29:62.86:0,63,446	1/1:6,21:27:54.09:525,54,0	0/1:6,13:20:1.94:285,0,2	1/1:7,5:30:58.49:343,58,0	0/1:6,18:24:7.05:306,0,7	1/1:4,20:26:40.83:520,41,0	1/1:5,14:20:22.95:362,23,0	1/1:2,16:19:45.07:436,45,0	1/1:4,9:13:7.93:225,8,0	1/1:6,14:20:26.18:312,26,0	0/0:22,0:25:65.43:0,65,445	1/1:2,3:22:37.09:200,37,0	1/1:4,3:27:54.12:301,54,0	1/1:2,2:17:28.57:157,29,0	1/1:7,1:12:15.24:82,15,0	1/1:7,0:22:34.63:160,35,0	1/1:1,0:6:8.56:44,9,0	1/1:2,13:15:32.89:306,33,0	1/1:4,15:20:35.89:336,36,0	1/1:2,18:21:50.92:481,51,0	0/0:25,1:28:43.51:0,44,464	0/0:29,0:28:73.61:0,74,531	1/1:10,0:27:45.35:226,45,0	1/1:1,0:6:14.20:71,14,0
chr10	96677223	.	A	AC	26602.37	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.040;DP=758;FS=8.633;HRun=2;HaplotypeScore=113.0146;InbreedingCoeff=0.9918;MQ=87.93;MQ0=0;MQRankSum=-11.553;QD=37.73;ReadPosRankSum=7.825;VQSLOD=3.2821;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:0,64:64:99:2547,178,0	1/1:0,8:8:15.05:216,15,0	0/0:25,0:25:68.92:0,69,778	0/0:28,0:28:75.13:0,75,849	1/1:0,28:28:72.24:1035,72,0	1/1:1,36:37:90.30:1295,90,0	1/1:2,26:28:69.19:970,69,0	1/1:3,28:31:78.22:1068,78,0	1/1:0,24:24:66.22:950,66,0	1/1:4,20:24:63.21:900,63,0	1/1:0,25:25:66.22:943,66,0	1/1:1,24:25:72.16:1009,72,0	1/1:1,23:24:60.20:864,60,0	1/1:0,28:28:75.25:1079,75,0	1/1:2,37:39:99:1425,99,0	1/1:0,20:20:51.17:734,51,0	1/1:2,36:38:99:1425,99,0	1/1:0,13:13:39.13:561,39,0	1/1:3,18:21:57.17:793,57,0	1/1:2,21:23:57.19:808,57,0	1/1:2,32:34:84.28:1209,84,0	1/1:0,31:31:87.29:1252,87,0	1/1:0,16:16:45.02:619,45,0	1/1:1,28:29:75.25:1079,75,0	1/1:0,20:20:57.19:820,57,0	1/1:0,23:23:69.21:973,69,0	1/1:0,38:38:99:1467,102,0	1/1:0,14:14:39.13:561,39,0
chr10	96678419	.	TTCTCTCTCTC	T	1684.26	PASS	AB=0.987;AC=42;AF=0.778;AN=54;BaseQRankSum=1.576;DP=545;FS=7.919;HRun=0;HaplotypeScore=191.0916;InbreedingCoeff=0.0112;MQ=59.34;MQ0=16;MQRankSum=-0.954;QD=3.71;ReadPosRankSum=0.954;VQSLOD=1.4680;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:2.36:0,2,79	1/1:8,1:9:2.56:16,3,0	0/0:19,0:13:0.47:0,0,1	./.	1/1:16,1:16:5.60:36,6,0	1/1:26,0:26:0.35:2,0,0	0/0:26,0:26:11.54:0,12,47	1/1:40,0:37:5.81:41,6,0	1/1:15,0:14:2.22:8,2,0	0/1:24,0:24:10.63:63,0,11	1/1:11,0:11:2.68:16,3,0	0/1:21,0:21:0.34:60,0,0	1/1:22,0:22:0.19:178,0,0	0/1:15,0:14:15.96:62,0,16	1/1:18,2:20:3.48:31,3,0	1/1:17,0:17:6.02:140,6,0	1/1:9,0:8:3.01:70,3,0	1/1:17,0:17:3.01:70,3,0	1/1:18,0:17:3.01:70,3,0	1/1:6,0:6:5.97:47,6,0	1/1:40,0:39:5.98:48,6,0	0/1:20,0:19:9.21:9,0,27	0/1:14,0:14:12.27:34,0,12	1/1:15,0:14:3.01:38,3,0	0/1:21,1:22:58.14:58,0,88	1/1:13,0:13:3.01:55,3,0	1/1:25,0:25:16.05:487,16,0	1/1:16,0:16:6.02:175,6,0
chr10	96678514	.	GCT	G	4236.98	PASS	AB=0.818;AC=39;AF=0.696;AN=56;BaseQRankSum=-3.808;DP=471;FS=14.401;HRun=0;HaplotypeScore=152.2918;InbreedingCoeff=0.7214;MQ=56.20;MQ0=5;MQRankSum=1.513;QD=13.00;ReadPosRankSum=3.686;VQSLOD=3.8927;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,14:20:6.41:55,6,0	0/0:10,0:10:11.96:0,12,74	0/0:22,0:12:21.28:0,21,282	0/0:30,0:19:20.28:0,20,274	0/0:16,0:16:5.71:0,6,42	1/1:10,3:13:17.65:221,18,0	1/1:7,16:24:23.74:270,24,0	1/1:12,4:16:24.05:292,24,0	1/1:5,14:19:27.08:329,27,0	1/1:11,7:18:33.10:403,33,0	1/1:4,4:8:21.07:258,21,0	1/1:11,3:14:20.57:225,21,0	1/1:8,14:22:32.82:325,33,0	1/1:9,13:22:14.90:166,15,0	0/0:25,0:25:16.72:0,17,156	0/0:9,3:12:3.07:0,3,9	0/1:14,4:18:13.36:62,0,13	1/1:7,10:17:3.85:155,4,0	1/1:13,2:15:8.92:88,9,0	1/1:8,6:14:11.77:105,12,0	1/1:5,9:14:3.01:37,3,0	1/1:8,16:24:14.63:184,15,0	1/1:3,2:5:6.28:75,6,0	1/1:9,6:15:26.91:309,27,0	0/0:15,0:15:1.86:0,2,40	0/0:15,0:15:38.78:0,39,338	1/1:11,8:20:47.96:531,48,0	1/1:5,1:6:12.04:147,12,0
chr10	96678528	.	T	TCACACACA	452.33	PASS	AB=0.995;AC=14;AF=0.250;AN=56;BaseQRankSum=2.139;DP=473;FS=3.022;HRun=0;HaplotypeScore=209.2359;InbreedingCoeff=-0.0075;MQ=52.82;MQ0=7;MQRankSum=-2.883;QD=2.04;ReadPosRankSum=-3.205;VQSLOD=2.4307;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:25.83:79,0,26	0/1:10,0:10:9.24:27,0,9	0/0:19,0:9:20.73:0,21,467	0/0:19,0:9:21.01:0,21,473	1/1:18,0:18:1.24:15,1,0	0/0:14,0:14:31.37:0,31,454	0/1:25,0:24:12.22:12,0,341	0/0:15,0:14:10.95:0,11,297	0/0:20,0:20:19.95:0,20,552	0/0:18,0:18:42.46:0,42,675	0/0:12,0:11:7.77:0,8,304	0/0:19,0:19:9.65:0,10,362	0/0:25,0:25:27.88:0,28,780	0/0:18,0:18:5.20:0,5,195	0/1:24,0:24:3.34:3,0,57	1/1:8,5:17:2.99:114,3,0	0/1:18,0:19:4.46:164,0,4	0/1:15,0:15:99:125,0,100	0/0:5,0:5:3.54:0,4,156	0/0:9,0:10:10.28:0,10,106	0/0:11,0:11:3.90:0,4,42	0/1:26,0:26:0.42:0,0,397	0/1:10,0:9:0.17:0,0,199	0/0:22,0:21:15.46:0,15,347	0/0:20,0:20:4.53:0,5,30	0/1:16,0:16:42.38:42,0,421	0/1:20,0:21:3.66:4,0,548	0/0:4,0:4:11.98:0,12,139
chr10	96678529	.	CTCAT	C	2720.10	PASS	AB=0.937;AC=30;AF=0.536;AN=56;BaseQRankSum=-0.202;DP=463;FS=24.483;HRun=0;HaplotypeScore=169.9963;InbreedingCoeff=0.1885;MQ=52.76;MQ0=7;MQRankSum=1.150;QD=8.45;ReadPosRankSum=3.627;VQSLOD=1.3405;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:8.72:57,9,0	0/0:10,0:10:4.51:0,5,18	0/0:18,0:8:18.09:0,18,319	0/0:17,0:9:20.69:0,21,336	0/0:18,0:18:1.08:0,1,3	0/1:14,0:14:13.22:128,0,13	1/1:25,0:24:13.03:114,13,0	0/1:12,0:11:3.19:96,0,3	1/1:19,1:20:8.87:236,9,0	1/1:19,0:19:43.40:256,43,0	1/1:12,0:11:16.46:161,16,0	0/1:6,13:19:22.52:201,0,23	0/1:20,4:25:10.84:377,0,11	0/1:17,1:18:30.97:158,0,31	0/0:24,0:24:8.48:0,8,69	0/0:15,0:15:6.35:0,6,35	0/1:15,0:15:36.57:37,0,49	0/1:13,0:15:49.30:98,0,49	0/1:5,0:5:9.35:74,0,9	1/1:8,2:10:9.30:169,9,0	1/1:11,0:11:3.38:34,3,0	0/1:25,0:25:1.20:88,0,1	0/1:10,0:9:12.79:13,0,90	1/1:22,0:22:12.41:113,12,0	0/0:21,0:21:1.85:0,2,24	0/0:16,0:16:21.25:0,21,254	1/1:20,0:20:48.40:410,48,0	1/1:4,0:4:11.66:80,12,0
chr10	96678531	.	CAT	C	559.83	PASS	AB=0.995;AC=25;AF=0.446;AN=56;BaseQRankSum=6.212;DP=459;FS=16.333;HRun=0;HaplotypeScore=167.1180;InbreedingCoeff=-0.1257;MQ=53.07;MQ0=7;MQRankSum=-6.065;QD=1.64;ReadPosRankSum=2.011;VQSLOD=1.8504;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:0.46:0,0,9	1/1:7,0:9:10.49:58,10,0	0/0:18,0:8:13.96:0,14,138	0/0:19,0:9:11.27:0,11,135	1/1:15,0:16:5.91:39,6,0	0/1:13,0:13:14.02:14,0,51	0/1:25,0:24:7.84:8,0,55	0/1:12,0:11:2.99:3,0,87	0/1:20,0:20:30.47:30,0,32	0/1:19,0:19:34.30:34,0,65	0/0:13,0:12:6.01:0,6,41	0/1:19,0:19:34.77:71,0,35	0/1:25,0:25:51.11:112,0,51	0/1:18,0:18:43.28:43,0,45	1/1:21,0:21:9.55:55,10,0	0/0:16,0:16:3.69:0,4,12	0/0:15,0:15:7.39:0,7,38	0/1:17,0:17:15.81:16,0,54	0/1:5,0:5:33.20:33,0,39	1/1:10,0:10:9.90:52,10,0	0/1:11,0:11:0.11:0,0,0	0/1:24,2:26:15.68:16,0,40	0/0:6,5:10:10.98:0,11,117	0/0:22,0:22:3.18:0,3,59	1/1:20,0:20:0.78:2,1,0	0/1:14,0:14:71.01:71,0,76	0/1:20,0:20:34.17:57,0,34	0/0:4,0:4:4.84:0,5,21
chr10	96678563	.	C	CAG	154.33	PASS	AB=0.763;AC=6;AF=0.111;AN=54;BaseQRankSum=5.625;DP=519;FS=10.399;HRun=0;HaplotypeScore=166.8273;InbreedingCoeff=0.4237;MQ=46.46;MQ0=24;MQRankSum=-4.453;QD=1.62;ReadPosRankSum=1.523;VQSLOD=2.1779;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:28.59:0,29,211	1/1:11,0:11:8.80:75,9,0	0/0:14,0:6:14.99:0,15,143	0/0:15,0:7:17.95:0,18,166	0/1:14,7:19:0.05:0,0,0	0/0:19,0:19:35.95:0,36,377	0/0:22,0:21:38.87:0,39,393	0/0:23,0:19:50.21:0,50,343	0/0:21,0:21:41.97:0,42,420	0/0:26,0:26:65.56:0,66,519	0/0:15,0:12:14.99:0,15,135	0/0:17,0:16:26.96:0,27,257	0/0:23,0:22:48.07:0,48,531	0/0:17,0:16:22.73:0,23,205	0/1:12,12:24:0.21:0,0,0	0/1:20,0:20:2.66:3,0,44	0/0:23,0:23:6.94:0,7,217	0/0:27,0:25:17.81:0,18,291	0/0:15,0:13:38.54:0,39,289	0/0:13,0:13:17.91:0,18,145	0/0:11,0:10:8.99:0,9,77	0/0:25,0:24:38.97:0,39,403	0/0:9,0:8:8.83:0,9,104	0/0:24,0:24:20.65:0,21,252	./.	0/1:8,11:16:59.62:175,0,60	0/0:16,0:16:29.72:0,30,232	0/0:2,0:2:5.99:0,6,49
chr10	96678569	.	CACACAG	C	3744.94	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-7.607;DP=518;FS=7.771;HRun=0;HaplotypeScore=175.8881;InbreedingCoeff=0.0722;MQ=48.71;MQ0=23;MQRankSum=-0.106;QD=9.09;ReadPosRankSum=-4.016;VQSLOD=1.1081;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:22:16.22:140,16,0	0/0:10,0:10:11.94:0,12,164	0/0:18,0:9:27.03:0,27,271	0/0:16,0:8:21.02:0,21,207	0/0:20,0:18:5.34:0,5,38	0/1:19,0:19:69.03:69,0,212	0/1:24,0:23:99:209,0,131	1/1:25,0:22:24.41:393,24,0	0/1:20,0:20:93.85:94,0,159	1/1:24,1:25:19.82:354,20,0	1/1:14,1:12:4.56:107,5,0	0/1:17,0:16:75.17:75,0,92	0/1:25,0:24:99:263,0,243	0/1:15,0:14:90.72:91,0,112	1/1:23,0:23:1.19:2,1,0	0/1:21,0:21:49.93:50,0,153	0/1:23,0:23:99:184,0,193	0/1:24,0:22:99:168,0,294	1/1:14,1:13:35.52:348,36,0	1/1:9,3:12:21.02:285,21,0	1/1:8,3:10:11.87:118,12,0	0/1:26,0:25:99:141,0,178	0/1:10,0:9:18.98:19,0,135	0/0:23,0:23:3.60:0,4,174	1/1:21,0:21:0.89:2,1,0	0/0:19,0:16:34.47:0,34,452	1/1:3,13:16:23.91:537,24,0	1/1:1,1:2:6.01:96,6,0
chr10	96678571	.	CACAG	C	4180.92	PASS	AB=0.988;AC=36;AF=0.643;AN=56;BaseQRankSum=-6.454;DP=507;FS=5.550;HRun=0;HaplotypeScore=159.2757;InbreedingCoeff=0.1335;MQ=48.49;MQ0=23;MQRankSum=0.221;QD=9.88;ReadPosRankSum=-1.639;VQSLOD=2.0457;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:22:26.18:200,26,0	0/0:9,0:9:11.90:0,12,125	0/0:18,0:9:27.03:0,27,271	0/0:16,0:8:21.02:0,21,207	0/0:22,0:20:11.52:0,12,86	0/1:19,0:19:58.64:97,0,59	1/1:24,0:23:7.15:230,7,0	1/1:25,0:22:25.56:417,26,0	1/1:19,0:19:1.31:217,1,0	1/1:4,19:23:59.83:627,60,0	1/1:5,10:12:12.01:168,12,0	0/1:16,0:15:26.99:165,0,27	0/1:24,0:23:21.47:249,0,21	0/1:14,0:13:41.77:130,0,42	1/1:24,0:24:1.11:2,1,0	0/1:21,0:21:50.34:50,0,72	0/1:23,0:23:80.99:190,0,81	0/1:25,0:23:88.97:222,0,89	1/1:15,0:13:32.84:289,33,0	1/1:9,2:11:20.99:205,21,0	1/1:10,0:9:11.86:94,12,0	0/1:21,2:22:13.70:179,0,14	0/1:9,0:8:38.20:38,0,81	0/1:21,1:22:17.57:48,0,18	1/1:21,0:21:0.89:2,1,0	0/0:19,0:16:34.10:0,34,385	1/1:15,0:15:23.89:298,24,0	1/1:2,0:2:6.01:63,6,0
chr10	96678573	.	CAG	C	5067.01	PASS	AB=0.917;AC=44;AF=0.786;AN=56;BaseQRankSum=-5.029;DP=520;FS=11.367;HRun=0;HaplotypeScore=145.8401;InbreedingCoeff=0.6630;MQ=49.60;MQ0=23;MQRankSum=0.607;QD=11.84;ReadPosRankSum=1.493;VQSLOD=4.1228;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:22:29.62:222,30,0	0/0:8,0:8:11.89:0,12,100	0/0:18,0:10:26.82:0,27,270	0/0:16,0:8:21.02:0,21,207	0/0:23,0:21:11.28:0,11,86	1/1:20,0:20:24.07:266,24,0	1/1:24,2:25:50.74:457,51,0	1/1:26,0:23:46.40:464,46,0	1/1:13,5:18:38.95:402,39,0	1/1:22,0:22:50.63:381,51,0	1/1:15,0:12:8.50:62,8,0	1/1:13,2:14:8.83:189,9,0	1/1:18,5:22:29.31:481,29,0	0/1:12,3:14:15.36:137,0,15	1/1:27,0:27:0.90:2,1,0	1/1:21,0:21:4.82:63,5,0	1/1:23,0:23:7.10:213,7,0	1/1:24,0:22:33.42:290,33,0	1/1:4,11:13:35.81:283,36,0	1/1:11,0:11:20.36:155,20,0	1/1:11,0:10:11.88:97,12,0	1/1:21,3:23:44.82:419,45,0	0/1:9,0:8:29.12:38,0,29	1/1:5,16:21:11.88:134,12,0	1/1:19,0:19:0.88:2,1,0	0/0:26,0:23:57.84:0,58,498	1/1:15,0:15:23.77:192,24,0	1/1:5,0:5:14.95:118,15,0
chr10	96678720	.	TCAAA	T	2381.67	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=3.167;DP=665;FS=2.516;HRun=0;HaplotypeScore=130.2147;InbreedingCoeff=0.8886;MQ=59.37;MQ0=2;MQRankSum=5.133;QD=13.61;ReadPosRankSum=0.719;VQSLOD=3.4545;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:41:64.39:0,64,953	0/0:17,0:17:24.08:0,24,560	./.	0/0:10,0:9:3.48:0,3,47	0/0:25,0:25:27.01:0,27,537	0/0:21,0:21:39.13:0,39,892	0/0:30,0:30:51.17:0,51,1177	1/1:27,4:31:12.04:186,12,0	0/0:20,0:20:42.14:0,42,943	0/0:33,0:33:45.15:0,45,991	0/0:17,0:17:30.06:0,30,625	0/0:23,0:23:30.10:0,30,690	0/0:26,0:26:42.10:0,42,942	0/0:14,0:13:33.07:0,33,696	0/0:31,0:31:60.03:0,60,1215	0/0:14,0:22:39.12:0,39,591	0/0:27,0:33:22.32:0,22,342	0/0:19,0:25:31.27:0,31,473	1/1:8,6:12:18.06:278,18,0	1/1:11,15:26:39.13:611,39,0	1/1:21,28:49:63.21:987,63,0	0/1:24,0:24:2.10:2,0,760	0/0:15,0:15:18.06:0,18,424	0/0:29,1:30:19.14:0,19,1298	0/0:24,0:23:42.14:0,42,960	0/0:23,0:23:33.11:0,33,742	1/1:9,7:17:18.05:263,18,0	1/1:8,6:14:15.05:235,15,0
chr10	96680693	.	G	GACACACACACACACAC	14365.82	PASS	AC=48;AF=0.923;AN=52;BaseQRankSum=-2.240;DP=583;FS=10.299;HRun=0;HaplotypeScore=254.6348;InbreedingCoeff=0.3987;MQ=55.89;MQ0=10;MQRankSum=-0.328;QD=29.80;ReadPosRankSum=3.227;VQSLOD=2.1535;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:38:19.45:383,19,0	1/1:5,0:4:6.02:416,6,0	0/0:34,0:22:0.42:0,0,1	0/0:37,0:26:11.19:0,11,100	./.	1/1:38,0:36:24.37:782,24,0	1/1:29,0:29:16.58:709,17,0	1/1:26,0:23:38.65:1049,39,0	1/1:18,0:17:5.36:135,5,0	1/1:24,0:21:25.32:1209,25,0	1/1:8,0:8:3.01:67,3,0	1/1:13,0:12:12.50:388,12,0	1/1:16,2:19:17.93:858,18,0	1/1:22,0:21:12.02:206,12,0	1/1:20,0:20:15.52:815,16,0	1/1:18,0:17:21.04:669,21,0	1/1:18,0:24:24.97:880,25,0	1/1:7,0:9:12.04:463,12,0	1/1:16,0:15:16.30:757,16,0	1/1:5,0:6:3.01:169,3,0	1/1:26,0:23:2.03:4,2,0	1/1:15,0:15:3.01:182,3,0	1/1:13,0:13:3.01:66,3,0	1/1:23,7:30:5.80:443,6,0	./.	1/1:31,0:31:48:2381,48,0	1/1:25,0:24:24.08:1239,24,0	1/1:5,0:5:3.01:93,3,0
chr10	96680992	.	TTGTGACGCAGACCTTGTGGTTTTGAGCAAGCTGGC	T	3196.18	PASS	AC=16;AF=0.533;AN=30;BaseQRankSum=5.530;DP=175;FS=11.312;HRun=0;HaplotypeScore=171.6298;InbreedingCoeff=0.6691;MQ=128.70;MQ0=0;MQRankSum=-5.394;QD=69.48;ReadPosRankSum=4.106;VQSLOD=1.5316;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,2:8:6.02:550,6,0	0/0:3,0:3:3.01:0,3,191	0/0:19,0:19:54.19:0,54,3214	0/0:24,0:24:69.10:0,69,3860	0/0:14,0:14:39.13:0,39,4956	1/1:8,2:10:3.01:275,3,0	./.	1/1:5,0:5:3:28,3,0	1/1:5,1:6:3.01:275,3,0	./.	1/1:1,1:2:3.01:275,3,0	./.	./.	1/1:4,1:5:3.01:275,3,0	0/0:7,0:7:18.06:0,18,1891	1/1:1,4:5:12.04:1099,12,0	1/1:2,3:5:6.02:550,6,0	./.	./.	./.	./.	./.	./.	./.	0/0:10,0:10:30.10:0,30,3811	0/0:15,0:15:42.14:0,42,5140	./.	./.
chr10	96681063	.	GGT	G	227.31	PASS	AB=1.000;AC=24;AF=0.667;AN=36;BaseQRankSum=-0.862;DP=72;FS=3.456;HRun=0;HaplotypeScore=36.5193;InbreedingCoeff=0.2321;MQ=113.38;MQ0=1;MQRankSum=-1.067;QD=4.46;ReadPosRankSum=-1.798;VQSLOD=1.4115;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:4:0.03:0,0,0	./.	0/1:14,0:10:3.72:4,0,139	0/0:13,0:12:20.59:0,21,158	./.	0/1:2,0:2:0:0,0,0	1/1:1,0:1:3:26,3,0	1/1:1,0:1:2.97:20,3,0	1/1:2,0:2:2.98:21,3,0	0/1:1,0:1:0:0,0,0	0/1:1,0:1:0:0,0,0	1/1:2,0:2:3:26,3,0	./.	0/1:3,0:3:9.08:14,0,9	0/1:3,0:3:4.69:11,0,5	1/1:2,0:2:5.94:41,6,0	0/1:5,0:5:0:0,0,0	./.	1/1:1,0:1:3:28,3,0	./.	./.	./.	./.	0/0:1,0:1:0:0,0,0	1/1:6,0:6:11.92:89,12,0	1/1:3,0:3:5.96:46,6,0	./.	./.
chr10	96681075	.	GCC	G	1042.46	PASS	AC=22;AF=0.611;AN=36;BaseQRankSum=-3.881;DP=78;FS=64.141;HRun=3;HaplotypeScore=23.7780;InbreedingCoeff=0.6368;MQ=96.63;MQ0=1;MQRankSum=-0.333;QD=28.17;ReadPosRankSum=-3.031;VQSLOD=-0.3522;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:7:15.05:210,15,0	./.	0/0:12,0:8:11.14:0,11,101	0/0:13,0:12:5.33:0,5,148	0/0:3,0:3:3.01:0,3,50	1/1:3,1:4:9.03:118,9,0	1/1:5,0:5:14.21:152,14,0	1/1:0,4:4:9.03:122,9,0	1/1:0,0:2:2.92:17,3,0	1/1:1,0:1:3.01:44,3,0	./.	1/1:1,0:1:2.97:20,3,0	1/1:2,0:2:5.98:58,6,0	0/0:1,0:1:2.80:0,3,13	0/0:3,0:4:12.04:0,12,161	./.	1/1:1,0:1:3.01:40,3,0	./.	./.	./.	1/1:6,0:6:18.06:261,18,0	./.	./.	1/1:4,0:4:11.97:142,12,0	0/0:5,0:5:15.05:0,15,223	0/0:2,0:2:6.01:0,6,78	./.	./.
chr10	96681250	.	G	GTTTTGTTTT	22958.74	PASS	AB=0.895;AC=49;AF=0.875;AN=56;BaseQRankSum=3.787;DP=382;FS=6.842;HRun=0;HaplotypeScore=155.4110;InbreedingCoeff=0.3935;MQ=79.82;MQ0=0;MQRankSum=-8.863;QD=66.35;ReadPosRankSum=3.364;VQSLOD=4.6362;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:28:50.34:1627,50,0	1/1:2,8:10:24.08:901,24,0	0/0:19,0:19:7.93:0,8,910	0/0:17,0:17:22.10:0,22,599	1/1:3,10:15:23.97:578,24,0	1/1:12,0:19:18.36:1282,18,0	1/1:14,0:22:31.22:1468,31,0	1/1:23,0:23:38.17:1505,38,0	1/1:11,0:11:5.21:784,5,0	1/1:9,0:11:33.10:906,33,0	0/1:9,0:9:9.67:377,0,10	1/1:11,0:13:36.12:1227,36,0	1/1:11,0:12:9.33:1078,9,0	1/1:14,0:17:12.33:1147,12,0	1/1:4,4:9:21.07:843,21,0	1/1:5,0:9:27.09:694,27,0	1/1:8,0:16:30.56:696,31,0	1/1:7,0:13:30.10:841,30,0	1/1:16,0:16:33.11:1044,33,0	1/1:8,0:8:24.07:750,24,0	1/1:4,0:3:6.02:183,6,0	0/1:10,0:10:19.69:492,0,20	1/1:4,0:6:15.05:480,15,0	0/1:7,0:13:21.71:685,0,22	1/1:4,8:12:15.05:505,15,0	1/1:7,10:22:32.39:1889,32,0	1/1:12,0:14:27.09:914,27,0	1/1:1,0:1:3.01:61,3,0
chr10	96681622	.	TCA	T	1345.30	PASS	AB=0.889;AC=39;AF=0.848;AN=46;BaseQRankSum=1.566;DP=542;FS=12.933;HRun=0;HaplotypeScore=77.7272;InbreedingCoeff=0.0430;MQ=64.09;MQ0=12;MQRankSum=1.135;QD=3.22;ReadPosRankSum=-1.375;VQSLOD=0.5733;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,1:28:5.60:42,6,0	1/1:5,0:7:5.68:28,6,0	./.	./.	./.	1/1:14,2:19:9.74:80,10,0	0/1:19,2:22:5.68:97,0,6	./.	0/1:9,6:17:5.44:60,0,5	1/1:15,1:15:3.01:32,3,0	0/1:15,2:17:14.96:26,0,15	1/1:10,6:17:11.81:111,12,0	1/1:10,3:13:9.02:97,9,0	0/1:14,0:13:0:0,0,0	1/1:14,0:21:8.52:42,9,0	1/1:4,4:11:14.49:105,14,0	1/1:15,7:24:17.60:157,18,0	0/1:14,5:20:29.47:96,0,29	1/1:9,0:10:2.84:14,3,0	./.	0/1:56,0:54:0.02:0,0,0	1/1:14,1:17:11.20:67,11,0	1/1:4,1:7:2.84:14,3,0	1/1:19,5:31:32.39:273,32,0	1/1:16,0:17:4.88:20,5,0	0/1:14,0:14:0:0,0,0	1/1:10,0:14:8.52:42,9,0	1/1:2,0:5:8.52:42,9,0
chr10	96683274	.	G	GGTGTGT	19755.14	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=3.077;DP=857;FS=29.963;HRun=0;HaplotypeScore=272.7329;InbreedingCoeff=0.8152;MQ=57.32;MQ0=32;MQRankSum=-6.231;QD=26.03;ReadPosRankSum=4.125;VQSLOD=2.7281;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:21:23.75:530,24,0	1/1:3,8:10:18.06:510,18,0	0/0:45,0:35:18.58:0,19,786	0/0:50,0:41:66:0,66,1101	1/1:11,14:26:18.06:410,18,0	1/1:33,0:31:5.36:776,5,0	1/1:24,0:26:30.31:403,30,0	1/1:32,0:53:80.38:1709,80,0	1/1:33,0:33:57.71:857,58,0	1/1:30,0:26:54.14:1056,54,0	1/1:19,0:17:17.92:292,18,0	1/1:47,0:42:60.93:777,61,0	1/1:37,0:35:55.21:907,55,0	1/1:26,0:25:54.75:917,55,0	1/1:20,28:52:78.27:2274,78,0	1/1:17,1:39:39.13:1028,39,0	1/1:19,0:18:28.31:445,28,0	1/1:12,0:13:30.05:685,30,0	1/1:13,0:21:30.06:656,30,0	1/1:18,0:19:23.89:292,24,0	1/1:50,0:45:26.93:551,27,0	1/1:28,0:28:37.22:477,37,0	1/1:14,0:13:20.65:216,21,0	1/1:20,0:21:0.55:78,1,0	1/1:9,19:28:42.14:1333,42,0	1/1:17,12:29:48.10:1272,48,0	1/1:12,1:25:36.09:888,36,0	1/1:6,0:10:15.05:415,15,0
chr10	96683289	.	GT	G	3893.85	PASS	AB=0.879;AC=23;AF=0.411;AN=56;BaseQRankSum=3.934;DP=814;FS=10.661;HRun=2;HaplotypeScore=256.9837;InbreedingCoeff=-0.4907;MQ=41.75;MQ0=46;MQRankSum=-4.190;QD=7.26;ReadPosRankSum=1.403;VQSLOD=-0.2858;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,7:19:87.38:87,0,97	0/1:7,1:7:57.41:57,0,59	0/0:67,0:34:81.67:0,82,1072	0/0:56,1:32:86.49:0,86,1105	0/1:21,0:20:82.78:160,0,83	0/1:25,4:27:20.42:262,0,20	0/1:23,4:27:99:253,0,106	0/1:43,1:41:99:297,0,672	0/1:25,1:30:97.96:280,0,98	0/1:30,2:28:99:184,0,412	0/1:14,2:15:24.62:73,0,25	0/1:32,8:39:99:485,0,125	0/1:23,5:30:95.69:323,0,96	0/1:24,3:27:20.01:273,0,20	0/1:42,0:42:99:158,0,559	0/0:29,3:30:26.65:0,27,295	0/1:15,8:19:10.25:222,0,10	0/1:16,2:17:51.40:51,0,222	0/0:26,1:20:8.73:0,9,444	0/1:10,4:13:57.20:163,0,57	0/0:48,13:52:25.83:0,26,479	0/1:22,3:25:99:185,0,101	1/1:11,2:13:3.03:161,3,0	1/1:15,1:16:2.12:151,2,0	0/1:21,0:20:24.97:25,0,298	0/1:24,0:23:41.27:41,0,481	0/0:23,0:20:0.92:0,1,276	0/0:10,1:10:14.89:0,15,123
chr10	96683290	.	T	TG	5540.62	PASS	AB=0.861;AC=29;AF=0.518;AN=56;BaseQRankSum=7.946;DP=799;FS=7.325;HRun=1;HaplotypeScore=249.4296;InbreedingCoeff=-0.5367;MQ=41.21;MQ0=47;MQRankSum=-3.502;QD=8.39;ReadPosRankSum=7.971;VQSLOD=1.8793;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,2:18:35:112,0,35	1/1:8,0:7:14.90:102,15,0	0/0:69,0:34:60.31:0,60,1008	0/0:57,0:31:87.13:0,87,1066	0/1:20,0:19:52.80:182,0,53	0/1:12,16:26:28:333,0,28	0/1:21,7:27:87.41:380,0,87	0/1:33,1:32:99:181,0,615	0/1:18,13:30:81.69:466,0,82	0/1:22,12:28:99:345,0,389	0/1:10,7:15:21.31:76,0,21	0/1:26,17:39:99:709,0,118	0/1:24,8:30:95.13:474,0,95	1/1:13,15:27:10.60:436,11,0	0/1:40,0:41:99:286,0,255	0/1:30,1:29:39.42:39,0,158	1/1:19,5:20:8.27:296,8,0	0/1:18,0:17:63.60:64,0,189	0/1:26,0:19:20.21:20,0,333	0/1:11,1:12:18.47:173,0,18	0/1:59,1:50:0.98:1,0,366	0/1:13,11:24:78.02:242,0,78	1/1:8,6:13:2.39:214,2,0	0/1:11,6:18:8.43:198,0,8	0/1:21,0:20:78.43:112,0,78	0/1:21,1:21:53.97:54,0,310	0/1:19,2:18:45.18:45,0,126	0/0:11,0:10:0.02:0,0,72
chr10	96683311	.	TTGTGTGTGTATG	T	7384.56	PASS	AB=0.955;AC=23;AF=0.411;AN=56;BaseQRankSum=7.192;DP=774;FS=2.657;HRun=0;HaplotypeScore=298.8768;InbreedingCoeff=0.7888;MQ=34.76;MQ0=39;MQRankSum=-8.574;QD=26.19;ReadPosRankSum=1.452;VQSLOD=3.8400;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:21:0,21,550	0/0:8,0:8:18.06:0,18,767	0/0:76,0:27:54.16:0,54,1557	0/0:67,0:14:33.11:0,33,1071	0/0:21,0:21:42.14:0,42,1861	1/1:4,6:20:5.35:456,5,0	1/1:6,15:22:20.81:516,21,0	0/0:45,0:35:72.25:0,72,2354	1/1:9,10:26:25.33:1220,25,0	1/1:11,9:23:44.78:1566,45,0	1/1:4,5:14:8.82:152,9,0	1/1:11,13:31:28.06:1328,28,0	1/1:7,10:22:5.68:1134,6,0	1/1:6,5:21:18.96:572,19,0	0/0:42,0:42:79.47:0,79,2798	0/0:27,0:26:45.07:0,45,1336	0/0:20,0:18:15.05:0,15,460	0/1:22,0:17:0.51:1,0,646	0/0:29,0:21:24.18:0,24,1094	0/0:9,0:7:21.07:0,21,646	0/0:62,0:58:58.23:0,58,1918	1/1:4,4:15:14.79:277,15,0	1/1:7,2:10:5.07:118,5,0	0/1:12,2:15:0.17:0,0,1	0/0:27,0:25:57.19:0,57,2310	0/1:31,1:27:45.64:46,0,2017	0/0:19,0:18:45.15:0,45,1212	0/0:16,0:16:30.06:0,30,802
chr10	96683320	.	TATG	T	2567.60	PASS	AB=0.753;AC=15;AF=0.268;AN=56;BaseQRankSum=10.885;DP=772;FS=1.433;HRun=0;HaplotypeScore=247.7783;InbreedingCoeff=0.5774;MQ=35.53;MQ0=39;MQRankSum=-8.560;QD=12.17;ReadPosRankSum=3.319;VQSLOD=2.9220;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:21.03:0,21,439	0/0:9,0:9:27.09:0,27,635	0/0:67,0:19:54.16:0,54,1139	0/0:68,0:11:33.11:0,33,754	0/0:22,0:22:44.72:0,45,1106	0/1:13,9:22:54.19:169,0,54	1/1:17,0:18:21.41:186,21,0	0/0:50,0:39:96.33:0,96,2192	1/1:22,5:27:8.98:454,9,0	1/1:20,7:25:31.99:615,32,0	1/1:8,5:13:9.71:96,10,0	0/1:28,6:34:17.21:505,0,17	0/1:18,3:23:9.60:337,0,10	1/1:12,8:21:19.86:228,20,0	0/0:40,0:40:91.51:0,92,2077	0/0:25,0:24:45.08:0,45,1085	0/0:21,0:18:17.27:0,17,348	0/0:23,0:18:21.59:0,22,467	0/0:25,0:20:51.16:0,51,973	0/0:9,0:7:21.07:0,21,514	0/0:62,0:58:57.65:0,58,1275	0/1:6,7:12:0.10:97,0,0	0/1:7,2:10:7.75:63,0,8	0/0:12,4:18:3.83:0,4,22	0/0:29,0:27:66.22:0,66,1510	0/0:31,0:26:44.10:0,44,1456	0/0:19,0:18:45.07:0,45,1034	0/0:17,0:17:33.06:0,33,654
chr10	96683321	.	ATG	A	750.66	PASS	AB=0.897;AC=17;AF=0.304;AN=56;BaseQRankSum=12.948;DP=774;FS=1.537;HRun=0;HaplotypeScore=248.7859;InbreedingCoeff=0.7614;MQ=35.53;MQ0=39;MQRankSum=-8.226;QD=3.56;ReadPosRankSum=2.749;VQSLOD=2.7398;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:20.38:0,20,231	0/0:9,0:9:27.09:0,27,428	0/0:65,0:18:39.08:0,39,601	0/0:68,0:11:27.09:0,27,434	0/0:21,0:21:45.15:0,45,714	0/1:18,4:22:17.48:44,0,17	1/1:18,0:18:11.81:56,12,0	0/0:51,0:40:85.74:0,86,1421	1/1:25,2:27:18.09:147,18,0	1/1:26,2:25:52.61:290,53,0	1/1:14,0:13:6.53:17,7,0	1/1:30,4:34:13.07:151,13,0	1/1:21,2:23:22.92:141,23,0	1/1:20,1:21:16.91:70,17,0	0/0:40,0:40:85.47:0,85,1221	0/0:25,0:24:45.12:0,45,629	0/0:21,0:18:11.97:0,12,183	0/0:24,0:19:12.31:0,12,261	0/0:26,0:19:27.09:0,27,411	0/0:9,0:7:21.07:0,21,307	0/0:62,0:58:58.38:0,58,780	0/1:12,1:12:1.43:22,0,1	0/1:10,1:10:2.10:2,0,6	0/0:18,2:18:3.63:0,4,14	0/0:30,0:28:63.19:0,63,926	0/0:31,0:26:43.05:0,43,870	0/0:19,0:18:42.14:0,42,626	0/0:17,0:17:30.08:0,30,433
chr10	96683341	.	TATG	T	980.20	PASS	AB=0.804;AC=11;AF=0.196;AN=56;BaseQRankSum=8.258;DP=749;FS=2.112;HRun=0;HaplotypeScore=233.9059;InbreedingCoeff=-0.2574;MQ=38.11;MQ0=32;MQRankSum=-8.279;QD=4.19;ReadPosRankSum=-4.084;VQSLOD=1.5850;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:11.77:0,12,221	0/0:13,0:13:39.13:0,39,932	0/0:44,0:8:24.08:0,24,454	0/0:43,0:4:12.04:0,12,265	0/0:22,0:22:51.04:0,51,1186	0/1:11,7:20:11:11,0,242	0/1:13,9:22:54.68:55,0,184	0/0:50,0:37:99:0,101,2321	0/1:18,10:29:99:187,0,324	0/1:23,4:26:99:249,0,287	0/1:13,2:15:15.25:50,0,15	0/1:20,12:32:99:205,0,368	0/1:14,7:20:99:180,0,352	0/1:15,4:19:89.91:90,0,97	0/0:44,0:44:81.65:0,82,1880	0/0:25,0:24:36.03:0,36,602	0/0:20,0:17:14.16:0,14,193	0/0:25,0:20:22.09:0,22,319	0/0:19,0:11:23.47:0,23,532	0/0:19,0:17:12.04:0,12,295	0/0:67,0:62:30.74:0,31,709	0/0:20,4:22:12.01:0,12,153	0/1:13,4:17:43.54:44,0,68	0/0:12,8:20:1.01:0,1,37	0/0:21,0:20:51.18:0,51,1243	0/0:28,0:24:69.24:0,69,1568	0/1:13,1:14:28.15:28,0,399	0/1:16,1:17:28.72:29,0,292
chr10	96683354	.	ATGTGTATGTGTATG	A	6343.77	PASS	AB=0.874;AC=33;AF=0.589;AN=56;BaseQRankSum=10.120;DP=759;FS=10.073;HRun=0;HaplotypeScore=286.0877;InbreedingCoeff=0.7262;MQ=41.89;MQ0=24;MQRankSum=-7.716;QD=13.41;ReadPosRankSum=-3.049;VQSLOD=1.7075;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:6.42:0,6,64	0/0:15,0:15:45.15:0,45,2481	0/0:33,0:6:6.02:0,6,135	0/0:29,0:4:3.01:0,3,77	0/0:22,0:22:54.17:0,54,2622	1/1:17,0:17:26.41:174,26,0	1/1:23,0:23:32.52:462,33,0	0/1:51,0:38:99:412,0,132	1/1:29,0:29:56.04:648,56,0	1/1:21,11:31:50.99:790,51,0	1/1:9,4:13:8.89:91,9,0	1/1:32,0:32:56.20:626,56,0	1/1:27,0:26:43.88:553,44,0	1/1:17,0:17:20.37:230,20,0	0/0:53,0:52:72:0,72,3641	0/0:23,0:22:9.20:0,9,255	0/0:23,0:20:5.80:0,6,33	0/1:18,0:15:4.26:17,0,4	1/1:17,1:11:9.02:208,9,0	1/1:5,15:19:8.82:74,9,0	0/1:30,47:71:0.11:0,0,1	1/1:12,13:24:20.45:155,20,0	1/1:9,14:23:14.39:145,14,0	1/1:17,0:18:7.60:88,8,0	0/0:25,0:25:69.24:0,69,2968	0/0:34,0:31:66.77:0,67,3156	1/1:10,3:13:18.06:597,18,0	1/1:14,6:20:36.12:1075,36,0
chr10	96683360	.	ATGTGTATG	A	2084.90	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=3.709;DP=753;FS=16.684;HRun=0;HaplotypeScore=244.3829;InbreedingCoeff=0.2216;MQ=42.70;MQ0=23;MQRankSum=-1.519;QD=6.36;ReadPosRankSum=-3.193;VQSLOD=0.8221;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:31:5.32:122,5,0	0/0:16,0:16:48.16:0,48,1885	0/0:32,0:5:15.05:0,15,251	0/0:30,0:3:9.03:0,9,180	0/0:22,0:22:60.18:0,60,2103	0/1:18,0:18:10.54:11,0,254	0/1:24,0:23:36.23:36,0,171	0/1:51,0:41:99:196,0,602	0/0:27,0:27:28.74:0,29,401	0/1:31,0:30:99:183,0,143	0/0:13,0:13:8.88:0,9,73	0/1:31,0:31:28.67:29,0,383	0/1:29,0:29:62.14:62,0,292	0/0:15,0:15:4.28:0,4,134	0/0:50,0:49:68.19:0,68,2991	1/1:16,6:21:39.13:824,39,0	1/1:7,15:19:2.60:79,3,0	1/1:4,16:19:5.88:57,6,0	0/1:16,0:10:41.11:41,0,90	0/0:19,0:18:11.64:0,12,117	0/0:75,0:68:14.87:0,15,177	0/0:23,0:22:20.93:0,21,216	0/0:22,0:22:14.82:0,15,130	0/0:18,0:18:8.32:0,8,62	0/0:26,0:26:78.27:0,78,2613	0/0:35,0:33:93.79:0,94,2907	0/1:13,0:13:20.37:224,0,20	1/1:20,0:20:33.07:397,33,0
chr10	96683366	.	ATG	A	2696.42	PASS	AB=0.773;AC=22;AF=0.393;AN=56;BaseQRankSum=5.525;DP=731;FS=7.577;HRun=0;HaplotypeScore=183.3535;InbreedingCoeff=-0.1567;MQ=44.32;MQ0=26;MQRankSum=-2.923;QD=6.56;ReadPosRankSum=-2.413;VQSLOD=2.2723;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:2.80:20,3,0	0/0:19,0:19:57.20:0,57,1000	0/0:25,0:7:18.53:0,19,308	0/0:32,0:7:0.01:0,0,190	0/0:21,0:21:60.18:0,60,1033	0/1:10,7:17:42.03:42,0,237	0/1:13,13:25:60.18:257,0,60	0/1:44,7:41:99:460,0,637	0/1:12,12:23:99:201,0,308	0/1:26,5:29:99:380,0,230	0/1:9,2:11:31.13:32,0,31	0/1:18,12:30:99:246,0,286	0/1:10,18:28:99:148,0,282	0/1:6,9:15:84:95,0,84	0/0:47,0:46:79.96:0,80,1513	1/1:19,3:21:29.51:277,30,0	1/1:19,0:17:4.76:23,5,0	1/1:19,0:18:5.95:59,6,0	0/1:17,1:11:70.77:71,0,95	0/0:18,0:17:11.33:0,11,130	0/0:73,0:66:14.98:0,15,189	0/0:17,4:20:20.64:0,21,202	0/1:15,5:20:30.10:30,0,40	0/1:9,9:18:23.09:106,0,23	0/0:27,0:27:81.28:0,81,1424	0/0:34,0:33:95.35:0,95,1637	0/1:10,1:11:60.48:151,0,60	0/1:18,2:20:22.84:270,0,23
chr10	96683561	.	GAGAGAGAGAGAGACAGAGAC	G	1006.93	PASS	AB=0.987;AC=11;AF=0.220;AN=50;BaseQRankSum=-1.006;DP=606;FS=39.445;HRun=0;HaplotypeScore=141.1197;InbreedingCoeff=-0.0091;MQ=29.05;MQ0=126;MQRankSum=0.752;QD=3.93;ReadPosRankSum=-1.772;VQSLOD=0.8728;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:30:99:111,0,111	0/1:6,0:5:21.45:145,0,21	./.	./.	1/1:18,12:24:3.01:34,3,0	0/0:29,0:24:15.96:0,16,241	0/0:39,0:8:3.01:0,3,34	0/0:31,0:29:56.97:0,57,547	0/0:22,0:16:9.96:0,10,119	0/0:21,0:15:29.41:0,29,620	0/0:24,0:19:2.98:0,3,24	0/0:24,0:19:9.88:0,10,78	0/0:11,0:9:4.76:0,5,23	0/0:20,0:16:3.48:0,3,127	0/1:25,1:23:19.23:182,0,19	0/0:16,0:12:15.52:0,16,280	0/1:27,0:17:99:260,0,407	0/0:22,0:7:18.02:0,18,385	0/0:18,0:14:11.67:0,12,127	0/0:17,0:14:3.85:0,4,22	0/1:49,0:25:0.10:0,0,0	0/0:17,0:14:2.07:0,2,24	0/0:23,0:15:3.90:0,4,41	1/1:33,0:20:2.04:6,2,0	0/1:17,1:16:29.83:30,0,74	0/1:26,0:24:99:364,0,154	0/0:12,0:9:14.91:0,15,257	./.
chr10	96683573	.	GACAGAGACAGAGACAGAGACAGAGACAGAGAC	G	499.31	PASS	AB=0.968;AC=14;AF=0.280;AN=50;BaseQRankSum=-0.943;DP=517;FS=8.068;HRun=0;HaplotypeScore=150.8191;InbreedingCoeff=-0.1125;MQ=28.28;MQ0=106;MQRankSum=-1.358;QD=2.21;ReadPosRankSum=-5.673;VQSLOD=-0.3431;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:25:5.16:0,5,316	0/1:6,0:5:11.42:18,0,11	./.	./.	0/0:23,0:20:3.01:0,3,37	0/0:24,0:19:6.49:0,6,255	0/0:30,0:9:0.89:0,1,2	0/1:22,0:20:15.49:15,0,74	0/1:22,0:16:16.02:16,0,51	0/0:13,0:7:9.86:0,10,670	0/1:15,8:18:0:0,0,0	0/1:21,0:15:7.97:97,0,8	0/1:10,0:9:61.23:76,0,61	0/1:18,0:15:84.87:85,0,209	0/0:23,0:20:14.25:0,14,442	0/1:14,0:11:86.37:86,0,491	0/1:27,0:17:99:123,0,610	0/0:21,0:6:9.17:0,9,542	0/1:12,0:9:96.68:97,0,124	0/0:13,0:10:0.01:0,0,0	0/0:42,0:24:0:0,0,0	1/1:7,10:15:1.77:4,2,0	0/0:16,4:11:2.64:0,3,116	1/1:33,0:21:2.04:6,2,0	0/0:14,0:12:6.02:0,6,256	0/0:22,0:21:28.80:0,29,1360	0/0:9,0:6:0.94:0,1,253	./.
chr10	96686289	.	GGT	G	5348.68	PASS	AB=0.920;AC=31;AF=0.554;AN=56;BaseQRankSum=0.471;DP=587;FS=14.725;HRun=0;HaplotypeScore=98.5936;InbreedingCoeff=0.2977;MQ=60.94;MQ0=31;MQRankSum=-2.694;QD=12.32;ReadPosRankSum=5.452;VQSLOD=3.6279;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:39,7:46:86.43:828,86,0	0/0:12,0:12:16.86:0,17,218	0/0:42,0:18:14.45:0,14,432	0/0:32,0:15:33.03:0,33,473	0/0:14,0:14:25.14:0,25,321	0/1:19,0:19:0.41:294,0,0	0/1:28,3:30:3.44:91,0,3	1/1:2,11:13:30.66:397,31,0	0/1:16,0:16:29.83:32,0,30	0/1:9,7:16:99:206,0,102	0/1:7,0:7:18.71:157,0,19	0/1:22,0:22:4.32:4,0,25	0/1:17,0:17:7.04:21,0,7	0/1:11,0:11:2.27:2,0,33	0/0:15,0:14:20.90:0,21,300	1/1:24,1:25:59.97:644,60,0	1/1:10,10:20:24.47:249,24,0	1/1:3,15:17:14.72:158,15,0	1/1:19,1:19:17.43:417,17,0	0/1:10,1:11:4.89:129,0,5	0/1:19,29:46:51.20:65,0,51	1/1:20,0:23:2.25:350,2,0	1/1:14,0:14:32.76:373,33,0	0/1:32,1:33:9.11:440,0,9	0/0:16,0:15:24.04:0,24,318	0/0:22,0:21:48.02:0,48,651	1/1:18,0:18:7.03:350,7,0	1/1:6,0:6:17.75:144,18,0
chr10	96686298	.	G	GTT	3562.97	PASS	AB=0.860;AC=33;AF=0.589;AN=56;BaseQRankSum=4.223;DP=592;FS=7.154;HRun=1;HaplotypeScore=117.6708;InbreedingCoeff=-0.0841;MQ=52.73;MQ0=33;MQRankSum=-0.619;QD=7.17;ReadPosRankSum=2.461;VQSLOD=0.2861;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:43,0:45:65.16:450,65,0	0/1:11,0:11:2.45:2,0,197	0/0:37,0:13:21.46:0,21,493	0/0:28,0:12:33.11:0,33,483	0/0:14,0:13:2.44:0,2,233	1/1:18,0:18:20.51:241,21,0	0/1:13,21:32:85.47:165,0,85	0/1:16,0:16:3.68:156,0,4	0/1:4,11:16:24.92:203,0,25	0/1:19,0:18:99:132,0,103	1/1:11,0:11:18.41:165,18,0	0/1:9,16:26:45.79:47,0,46	0/1:7,12:19:11.18:109,0,11	0/1:2,9:12:29.86:75,0,30	0/0:15,0:14:18.01:0,18,202	1/1:20,0:20:36.02:206,36,0	1/1:22,0:21:6.80:52,7,0	1/1:18,0:17:5.85:57,6,0	0/1:25,0:24:24.68:204,0,25	1/1:14,0:14:9.37:93,9,0	0/1:42,0:40:14.47:20,0,14	0/1:19,1:20:32.91:169,0,33	1/1:14,1:15:35.15:301,35,0	1/1:26,2:28:13.27:367,13,0	0/1:15,0:14:2.92:3,0,235	0/1:23,0:22:16.88:17,0,452	0/1:18,0:18:44.54:209,0,45	0/1:9,0:9:18.27:121,0,18
chr10	96686301	.	TTTGTGTGTG	T	1059.65	PASS	AB=0.829;AC=4;AF=0.071;AN=56;BaseQRankSum=6.840;DP=596;FS=25.800;HRun=0;HaplotypeScore=171.5459;InbreedingCoeff=0.4098;MQ=52.36;MQ0=36;MQRankSum=-5.951;QD=11.39;ReadPosRankSum=3.658;VQSLOD=1.0111;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:44,5:49:24:154,0,24	0/0:12,0:12:17.44:0,17,215	0/0:36,0:13:34.84:0,35,429	0/0:29,0:12:33.10:0,33,414	0/0:13,0:12:30.08:0,30,433	0/0:18,0:18:33.32:0,33,631	0/0:31,0:29:32.71:0,33,877	0/0:17,0:17:31.76:0,32,303	0/0:18,0:17:25.22:0,25,762	0/0:20,0:19:48.46:0,48,1235	0/0:11,0:11:16.79:0,17,390	0/0:24,0:24:20.35:0,20,618	0/0:18,0:18:21.80:0,22,556	0/0:12,0:12:12.04:0,12,458	0/0:15,0:14:21.07:0,21,661	1/1:11,11:22:25.62:677,26,0	0/1:14,0:20:70.26:343,0,70	0/0:19,0:18:5.96:0,6,73	0/0:24,0:23:47.40:0,47,609	0/0:15,0:15:19.24:0,19,301	0/0:43,0:41:15.12:0,15,268	0/0:20,0:20:30.81:0,31,536	0/0:16,0:16:28.50:0,28,434	0/0:25,0:26:49.98:0,50,1101	0/0:15,0:14:23.55:0,24,525	0/0:23,0:23:57.19:0,57,1469	0/0:18,0:18:39.08:0,39,591	0/0:8,0:7:19.40:0,19,415
chr10	96686862	.	GCAAC	G	197.80	PASS	AB=0.878;AC=7;AF=0.125;AN=56;BaseQRankSum=3.403;DP=364;FS=29.466;HRun=0;HaplotypeScore=82.8037;InbreedingCoeff=0.4379;MQ=78.37;MQ0=0;MQRankSum=-3.707;QD=4.21;ReadPosRankSum=-0.262;VQSLOD=0.0980;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:34.44:0,34,454	1/1:6,0:6:3.01:44,3,0	0/0:18,0:16:34.45:0,34,471	0/0:13,0:11:25.46:0,25,351	0/1:8,1:9:1.25:36,0,1	0/0:15,0:15:32.44:0,32,438	0/0:25,0:25:42.15:0,42,761	0/0:15,0:15:42.92:0,43,647	0/0:6,0:6:18.06:0,18,281	0/0:7,0:7:18.06:0,18,286	0/0:6,0:6:18.04:0,18,254	0/0:10,0:10:21.05:0,21,314	0/0:9,0:9:27.03:0,27,385	0/0:14,0:14:39.04:0,39,569	0/1:11,2:13:15.02:116,0,15	0/0:15,0:15:23.06:0,23,169	0/0:26,0:26:46.58:0,47,363	0/0:16,0:16:41.01:0,41,331	0/0:10,0:10:26.89:0,27,336	0/0:4,0:4:6.02:0,6,95	0/0:26,0:26:48.20:0,48,757	0/0:10,0:10:30.09:0,30,447	0/0:5,0:5:15.03:0,15,190	0/0:19,0:19:35.84:0,36,528	1/1:4,1:6:5.30:99,5,0	0/1:11,1:13:23.83:27,0,24	0/0:20,0:20:41.26:0,41,652	0/0:3,0:3:5.38:0,5,55
chr10	96686864	.	AACCC	A	864.62	PASS	AB=0.964;AC=13;AF=0.232;AN=56;BaseQRankSum=5.895;DP=361;FS=27.987;HRun=0;HaplotypeScore=77.8983;InbreedingCoeff=0.5234;MQ=76.14;MQ0=0;MQRankSum=-5.190;QD=7.58;ReadPosRankSum=2.880;VQSLOD=0.5036;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:26:61.91:62,0,138	1/1:0,6:6:3.01:60,3,0	0/0:15,0:13:30.60:0,31,374	0/0:13,0:11:26.89:0,27,336	1/1:7,0:8:21.76:197,22,0	0/0:15,0:15:32.91:0,33,347	0/0:26,0:26:32.39:0,32,621	0/0:15,0:15:25.48:0,25,334	0/0:6,0:6:17.24:0,17,221	0/0:7,0:7:18.01:0,18,207	0/0:6,0:6:17.99:0,18,191	0/0:11,0:11:21.02:0,21,278	0/0:9,0:9:26.22:0,26,324	0/0:14,0:14:38.97:0,39,436	1/1:11,1:12:29.91:279,30,0	0/1:17,0:17:16.18:65,0,16	0/1:26,0:27:20.77:57,0,21	0/0:16,0:16:0.48:0,0,42	0/0:10,0:10:3.25:0,3,148	0/0:4,0:4:6:0,6,53	0/0:22,0:24:13.10:0,13,363	0/0:9,0:9:26.90:0,27,250	0/0:5,0:5:10.78:0,11,77	0/0:19,0:19:35.90:0,36,448	1/1:5,1:6:8.63:110,9,0	1/1:12,0:12:23.36:206,23,0	0/0:19,0:20:6.17:0,6,312	0/0:3,0:3:5.21:0,5,31
chr10	96687354	.	CTG	C	2887.01	PASS	AB=0.978;AC=43;AF=0.768;AN=56;BaseQRankSum=5.211;DP=640;FS=2.343;HRun=0;HaplotypeScore=124.0651;InbreedingCoeff=0.3306;MQ=61.14;MQ0=15;MQRankSum=-2.672;QD=5.42;ReadPosRankSum=0.272;VQSLOD=3.3226;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:27.03:0,27,271	0/1:7,1:7:12.11:58,0,12	0/0:27,0:18:5.81:0,6,56	0/0:30,0:18:3.01:0,3,39	0/1:25,0:25:56.18:61,0,56	1/1:34,0:34:34.09:167,34,0	1/1:17,0:17:11.36:56,11,0	1/1:27,6:29:20.98:199,21,0	1/1:22,0:22:25.57:125,26,0	1/1:21,0:20:15.76:73,16,0	1/1:20,0:20:11.36:56,11,0	1/1:14,0:14:14.04:70,14,0	1/1:20,0:20:22.73:112,23,0	1/1:24,0:24:36.93:181,37,0	1/1:22,0:22:28.97:165,29,0	0/0:22,0:22:11.62:0,12,369	1/1:46,0:44:64.30:375,64,0	0/1:30,0:29:53.49:118,0,53	1/1:20,5:25:20.60:169,21,0	1/1:5,12:16:21.06:233,21,0	1/1:10,11:23:0.73:200,1,0	1/1:16,0:16:5.68:28,6,0	1/1:21,0:21:11.40:56,11,0	1/1:13,0:13:2.84:14,3,0	0/1:21,0:21:20.28:70,0,20	0/1:28,0:28:32.23:130,0,32	1/1:10,9:23:29.40:256,29,0	1/1:4,2:8:8.86:81,9,0
chr10	96687383	.	TGTGTGTGTGC	T	3007.28	PASS	AB=0.992;AC=20;AF=0.357;AN=56;BaseQRankSum=9.804;DP=645;FS=9.271;HRun=0;HaplotypeScore=184.5416;InbreedingCoeff=0.4260;MQ=57.66;MQ0=21;MQRankSum=-7.601;QD=10.13;ReadPosRankSum=1.838;VQSLOD=1.8803;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:39.05:0,39,1421	0/0:10,0:9:12.49:0,12,362	0/0:21,0:7:1.87:0,2,225	0/0:22,0:6:5.10:0,5,339	0/0:24,0:23:29.52:0,30,913	0/1:33,0:32:54.66:489,0,55	1/1:25,1:26:12.04:222,12,0	0/0:30,0:28:75.82:0,76,1328	1/1:16,3:19:5.13:524,5,0	1/1:24,0:23:7.61:356,8,0	0/1:16,0:16:10.26:147,0,10	0/1:17,0:17:7.17:185,0,7	1/1:17,2:19:24.08:443,24,0	1/1:21,0:21:39.13:563,39,0	0/0:18,0:18:30.10:0,30,827	0/0:22,0:22:63.18:0,63,2315	0/1:40,0:38:16.47:16,0,756	0/0:32,0:31:48.14:0,48,1280	0/0:24,0:21:53.70:0,54,1074	0/0:26,0:25:53.95:0,54,1257	0/0:31,0:31:69.06:0,69,1651	1/1:15,0:15:7.84:85,8,0	1/1:19,0:19:1.88:3,2,0	0/1:19,1:20:18.98:94,0,19	0/0:17,0:17:21.07:0,21,603	0/1:28,0:28:60.08:60,0,1529	0/0:23,0:23:55.38:0,55,1291	0/0:9,0:9:21.03:0,21,628
chr10	96687385	.	TGTGTGTGC	T	5884.68	PASS	AB=0.874;AC=24;AF=0.429;AN=56;BaseQRankSum=1.937;DP=624;FS=8.987;HRun=0;HaplotypeScore=153.9545;InbreedingCoeff=0.6575;MQ=58.04;MQ0=20;MQRankSum=-8.058;QD=19.23;ReadPosRankSum=1.178;VQSLOD=3.6195;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:36.06:0,36,1105	0/0:9,0:8:12.05:0,12,258	0/1:21,0:7:1.14:1,0,174	0/0:21,0:6:4.93:0,5,205	0/0:24,0:23:29.39:0,29,637	0/1:5,26:30:27.44:981,0,27	1/1:2,26:28:12.04:326,12,0	0/0:30,0:27:71:0,71,952	1/1:5,13:18:27.09:719,27,0	1/1:5,15:19:39.58:690,40,0	1/1:2,12:14:11.89:345,12,0	1/1:1,16:17:14.79:433,15,0	1/1:2,16:18:24.08:651,24,0	1/1:1,18:19:39.13:1100,39,0	0/0:17,0:17:30.10:0,30,565	0/0:22,0:22:63.15:0,63,1783	0/1:38,2:38:99:163,0,222	0/0:33,0:32:44.87:0,45,823	0/0:20,0:18:47.03:0,47,747	0/0:26,0:25:53.93:0,54,934	0/0:30,0:30:68.91:0,69,1167	1/1:2,13:15:6.02:172,6,0	1/1:19,0:19:12:108,12,0	1/1:3,16:19:2.73:66,3,0	0/0:17,0:17:20.86:0,21,419	0/1:27,0:27:99:130,0,989	0/0:24,0:24:52.40:0,52,906	0/0:9,0:9:21.03:0,21,469
chr10	96687387	.	TGTGTGC	T	4421.35	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=10.486;DP=608;FS=3.219;HRun=0;HaplotypeScore=140.6722;InbreedingCoeff=0.6731;MQ=60.45;MQ0=17;MQRankSum=-6.642;QD=14.04;ReadPosRankSum=1.624;VQSLOD=4.0033;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:36.01:0,36,771	0/0:9,0:8:12.47:0,12,156	0/1:20,0:7:12.65:13,0,112	0/0:20,0:7:1.85:0,2,118	0/0:23,0:22:15.24:0,15,354	1/1:29,1:29:15.16:611,15,0	1/1:27,0:27:12.04:211,12,0	0/0:29,0:27:45.86:0,46,635	1/1:16,0:16:27.09:475,27,0	1/1:16,0:16:38.54:468,39,0	1/1:13,0:13:11.82:210,12,0	1/1:16,0:16:14.92:264,15,0	1/1:18,0:18:24.08:420,24,0	1/1:19,0:19:38.99:681,39,0	0/0:17,0:17:30.06:0,30,298	0/0:22,0:22:58.92:0,59,1264	1/1:41,2:41:33.81:461,34,0	0/0:33,0:32:27.55:0,28,399	0/0:20,0:18:2.82:0,3,409	0/0:24,0:24:50.82:0,51,609	0/0:31,0:31:51.43:0,51,748	1/1:13,0:13:6.02:105,6,0	1/1:2,17:19:12.04:290,12,0	1/1:17,0:17:2.75:52,3,0	0/0:17,1:18:7.70:0,8,234	0/1:26,0:26:99:154,0,516	0/1:22,0:22:7.50:7,0,483	0/0:9,0:9:20.06:0,20,296
chr10	96687389	.	TGTGC	T	4471.71	PASS	AB=0.989;AC=35;AF=0.625;AN=56;BaseQRankSum=8.099;DP=604;FS=3.172;HRun=0;HaplotypeScore=126.9505;InbreedingCoeff=0.1720;MQ=62.49;MQ0=16;MQRankSum=-5.229;QD=9.05;ReadPosRankSum=0.775;VQSLOD=3.8944;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:30:0,30,472	0/0:9,0:8:8.91:0,9,48	0/1:20,0:7:12.88:13,0,52	0/1:20,0:7:1.20:1,0,58	0/1:22,1:22:40.32:40,0,76	1/1:30,0:29:36.11:467,36,0	1/1:27,0:27:12.04:155,12,0	0/1:29,0:27:31.95:32,0,365	1/1:16,0:16:27.09:349,27,0	1/1:16,0:16:38.54:385,39,0	1/1:13,0:13:11.87:155,12,0	1/1:16,0:16:15.05:195,15,0	1/1:18,0:18:24.04:308,24,0	1/1:19,0:19:38.85:499,39,0	0/0:17,0:17:4.28:0,4,21	0/0:19,0:20:41.19:0,41,825	1/1:6,35:40:61.16:1166,61,0	0/1:32,1:32:45.93:46,0,87	0/1:20,0:18:52.76:53,0,233	0/0:25,0:25:53.38:0,53,364	0/1:30,0:30:2.43:2,0,440	1/1:13,0:13:6.02:77,6,0	1/1:17,0:17:12.04:157,12,0	1/1:17,0:17:2.77:38,3,0	0/1:18,1:19:40.38:44,0,40	0/1:26,0:26:71.26:222,0,71	0/1:22,0:22:61.13:61,0,213	0/1:9,0:9:6.70:7,0,127
chr10	96687391	.	TGC	T	4305.56	PASS	AB=0.975;AC=40;AF=0.714;AN=56;BaseQRankSum=8.675;DP=592;FS=10.758;HRun=0;HaplotypeScore=112.9580;InbreedingCoeff=0.5760;MQ=64.52;MQ0=15;MQRankSum=-2.370;QD=9.63;ReadPosRankSum=3.720;VQSLOD=4.0590;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:38:26.92:0,27,251	1/1:2,7:8:8.55:109,9,0	0/1:21,0:8:1.04:19,0,1	0/1:15,0:6:3.70:4,0,23	1/1:7,15:21:15.04:195,15,0	1/1:30,0:29:38.95:323,39,0	1/1:27,0:27:11.99:99,12,0	0/0:29,0:27:19.55:0,20,365	1/1:16,0:16:26.97:223,27,0	1/1:16,0:16:37.99:311,38,0	1/1:13,0:13:11.73:99,12,0	1/1:16,0:16:14.98:125,15,0	1/1:18,0:18:23.92:196,24,0	1/1:19,0:19:38.86:317,39,0	1/1:1,16:17:27.09:378,27,0	0/0:7,0:18:42.69:0,43,447	1/1:40,1:40:65.99:590,66,0	1/1:3,26:28:5.95:297,6,0	0/0:19,0:18:12.84:0,13,192	0/1:24,0:24:9.68:10,0,173	0/0:31,0:31:9.74:0,10,313	1/1:13,0:13:5.99:49,6,0	1/1:17,0:17:11.99:101,12,0	1/1:17,0:17:2.54:24,3,0	1/1:5,14:19:15.04:192,15,0	1/1:4,21:25:60.02:630,60,0	0/1:20,0:20:16.08:16,0,123	0/0:9,0:9:0.33:0,0,71
chr10	96688233	.	TGG	T	2182.53	PASS	AB=0.773;AC=17;AF=0.304;AN=56;BaseQRankSum=-6.658;DP=640;FS=20.798;HRun=12;HaplotypeScore=100.0674;InbreedingCoeff=0.3995;MQ=76.73;MQ0=2;MQRankSum=-2.490;QD=8.56;ReadPosRankSum=2.692;VQSLOD=0.4871;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:27:25.49:0,25,198	1/1:2,6:8:14.99:151,15,0	0/1:23,1:23:11.57:12,0,223	0/0:15,0:15:26.79:0,27,294	1/1:5,23:31:65.22:604,65,0	0/0:19,0:19:51.06:0,51,504	0/0:18,0:20:37.38:0,37,333	0/1:14,2:21:39.47:42,0,39	0/0:33,0:33:81.58:0,82,787	0/0:27,0:27:47.90:0,48,421	0/0:22,0:23:48.94:0,49,527	0/0:21,0:21:42.08:0,42,460	0/0:30,0:30:81.10:0,81,818	0/0:23,0:24:60.21:0,60,613	1/1:7,19:25:54.08:546,54,0	0/0:22,0:22:35.28:0,35,409	0/0:30,0:30:44.58:0,45,568	0/0:19,0:19:31.43:0,31,350	0/1:7,2:9:10.66:52,0,11	0/1:18,1:26:16.61:17,0,61	0/1:14,3:19:49.94:64,0,50	0/0:27,0:27:68.98:0,69,698	0/0:20,0:20:51.04:0,51,485	0/0:27,0:26:70:0,70,699	1/1:8,15:22:42.08:426,42,0	1/1:12,14:26:6.37:383,6,0	0/1:13,2:27:40.55:41,0,118	0/1:7,1:14:32.10:32,0,32
chr10	96688244	.	GGA	G	620.29	PASS	AB=0.952;AC=10;AF=0.179;AN=56;BaseQRankSum=7.127;DP=549;FS=52.110;HRun=0;HaplotypeScore=97.4362;InbreedingCoeff=0.1544;MQ=74.52;MQ0=2;MQRankSum=-0.919;QD=4.19;ReadPosRankSum=4.530;VQSLOD=0.0952;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,1:22:45.80:0,46,426	0/1:8,2:10:29.80:71,0,30	0/1:19,0:17:56.64:57,0,241	0/0:16,0:15:22.29:0,22,330	1/1:26,1:27:6.52:178,7,0	0/0:20,0:20:60.18:0,60,859	0/0:20,0:20:53.86:0,54,681	0/0:20,1:21:18.35:0,18,359	0/0:27,0:27:81.27:0,81,1228	0/0:17,0:17:51.17:0,51,736	0/0:19,0:19:56.91:0,57,801	0/0:19,0:19:57.14:0,57,768	0/0:30,0:30:90.27:0,90,1300	0/0:23,0:23:69.05:0,69,987	1/1:21,2:22:1.78:200,2,0	0/0:14,0:14:38.82:0,39,469	0/0:19,0:19:42.83:0,43,598	0/0:18,0:18:46.63:0,47,511	0/0:6,0:6:9.96:0,10,83	0/0:15,0:15:13.77:0,14,215	0/1:16,0:16:8.58:9,0,123	0/0:27,0:27:81.08:0,81,1107	0/0:21,0:21:63.16:0,63,851	0/0:24,0:24:72.23:0,72,1088	0/1:20,0:19:74.62:141,0,75	0/1:20,1:21:84.90:85,0,167	0/0:23,0:23:10.52:0,11,184	0/1:11,1:12:20.45:20,0,116
chr10	96689002	.	GT	G	5292.97	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.704;DP=699;FS=2.681;HRun=8;HaplotypeScore=74.4953;InbreedingCoeff=0.9618;MQ=79.27;MQ0=0;MQRankSum=-1.308;QD=25.33;ReadPosRankSum=0.829;VQSLOD=5.6779;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,35:36:99:985,102,0	0/0:7,0:7:21.06:0,21,254	0/0:27,1:26:1.70:0,2,431	0/0:24,0:22:47.14:0,47,478	0/0:35,0:35:96.26:0,96,1135	0/0:19,0:19:57.17:0,57,689	0/0:23,0:23:54.17:0,54,652	1/1:2,21:23:63.09:608,63,0	0/0:23,0:23:69.19:0,69,811	0/0:43,0:43:99:0,117,1404	0/0:17,0:17:48.11:0,48,563	0/0:26,0:26:72.19:0,72,845	0/0:26,0:26:69.17:0,69,800	0/0:14,0:14:42.11:0,42,485	0/0:30,0:30:78.24:0,78,942	1/1:1,17:18:14.84:427,15,0	0/0:28,0:28:72.22:0,72,866	0/0:30,0:30:87.27:0,87,1049	1/1:3,17:20:51.08:492,51,0	1/1:0,30:30:84.13:811,84,0	1/1:2,26:28:66.11:637,66,0	0/0:28,0:28:78.24:0,78,936	0/0:23,0:23:63.19:0,63,757	0/0:22,0:22:60.16:0,60,703	0/0:18,0:18:48.15:0,48,579	0/0:26,0:26:72.22:0,72,869	1/1:1,26:27:66.10:637,66,0	1/1:3,24:27:72.12:695,72,0
chr10	96690258	.	GA	G	11031.20	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-5.046;DP=676;FS=17.249;HRun=11;HaplotypeScore=90.8885;InbreedingCoeff=0.8579;MQ=75.12;MQ0=0;MQRankSum=-2.033;QD=18.00;ReadPosRankSum=0.780;VQSLOD=4.1059;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:34:82.93:671,83,0	1/1:2,17:19:41.57:344,42,0	0/1:14,0:14:7.47:7,0,164	0/0:10,0:10:17.66:0,18,158	1/1:7,23:30:50.85:418,51,0	1/1:5,22:27:27.94:436,28,0	1/1:2,24:26:62.92:517,63,0	1/1:5,28:33:80.87:662,81,0	1/1:5,14:19:41.94:345,42,0	1/1:2,31:33:92.89:763,93,0	1/1:5,24:29:59.87:492,60,0	1/1:2,19:21:50.94:419,51,0	1/1:1,18:19:41.95:345,42,0	1/1:6,20:27:33.89:424,34,0	1/1:6,21:28:55.93:449,56,0	1/1:2,25:28:44.95:565,45,0	0/0:35,0:35:84.19:0,84,885	0/0:18,0:17:48.12:0,48,511	1/1:6,20:27:61.93:495,62,0	1/1:0,25:25:62.89:517,63,0	1/1:3,28:32:77.90:640,78,0	1/1:4,15:19:41.91:345,42,0	1/1:5,15:20:38.79:320,39,0	1/1:2,18:21:47.46:376,47,0	1/1:4,18:22:44.93:369,45,0	1/1:7,19:26:53.86:439,54,0	1/1:4,23:27:65.91:541,66,0	1/1:1,5:7:17.02:129,17,0
chr10	96690610	.	GA	G	873.92	PASS	AB=0.909;AC=8;AF=0.143;AN=56;BaseQRankSum=1.123;DP=712;FS=9.938;HRun=11;HaplotypeScore=98.9714;InbreedingCoeff=0.4120;MQ=79.14;MQ0=5;MQRankSum=-0.350;QD=6.07;ReadPosRankSum=-0.461;VQSLOD=1.2654;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,3:42:52.27:0,52,934	0/0:14,0:14:39.10:0,39,413	0/0:47,1:27:13.88:0,14,259	0/0:36,0:27:15.31:0,15,212	0/0:31,0:33:74.98:0,75,758	0/0:24,0:24:59.72:0,60,303	0/0:18,0:18:45.68:0,46,245	0/0:29,0:29:68.86:0,69,658	0/0:22,0:22:35.22:0,35,257	0/0:24,0:24:37.57:0,38,245	0/0:27,0:27:56.58:0,57,288	0/0:21,0:21:21.17:0,21,189	0/0:19,0:19:28.20:0,28,214	0/1:15,2:17:25.61:26,0,132	0/0:25,0:25:59.94:0,60,596	0/1:21,3:25:4.92:5,0,535	1/1:5,34:40:79.94:646,80,0	1/1:6,19:25:13.17:313,13,0	0/0:23,3:26:16.91:0,17,569	0/0:27,0:27:66.14:0,66,679	0/0:29,2:31:25.33:0,25,628	0/0:31,1:32:18.98:0,19,297	0/0:22,1:23:12.19:0,12,222	0/1:19,1:20:16.74:17,0,177	0/0:22,0:23:50.95:0,51,516	0/0:21,0:21:29.16:0,29,487	0/1:15,2:17:7.14:7,0,332	0/0:3,0:3:6.02:0,6,64
chr10	96692655	.	ATTT	A	9902.77	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.922;DP=581;FS=11.577;HRun=15;HaplotypeScore=110.2933;InbreedingCoeff=0.9665;MQ=67.61;MQ0=3;MQRankSum=-2.048;QD=18.20;ReadPosRankSum=4.878;VQSLOD=2.6793;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,26:32:53.99:605,54,0	1/1:1,0:8:17.64:107,18,0	0/0:26,0:20:24.05:0,24,363	0/0:10,0:9:17.90:0,18,197	1/1:9,0:20:17.42:106,17,0	1/1:4,20:25:46.52:536,47,0	1/1:3,11:16:19.37:217,19,0	1/1:15,24:41:67.06:724,67,0	1/1:4,23:27:60.08:673,60,0	1/1:10,15:27:47.68:506,48,0	1/1:16,14:31:29.57:336,30,0	1/1:3,15:18:39.03:436,39,0	1/1:5,13:18:29.94:335,30,0	1/1:4,8:12:17.95:198,18,0	1/1:7,0:29:61.67:372,62,0	1/1:2,14:16:33.01:370,33,0	1/1:5,9:15:21.86:266,22,0	1/1:1,15:17:39.01:421,39,0	1/1:8,13:23:16.79:397,17,0	1/1:3,15:19:31.55:368,32,0	1/1:2,13:15:33.07:370,33,0	1/1:3,16:21:34.35:385,34,0	1/1:3,11:14:23.12:265,23,0	1/1:3,11:15:25.46:300,25,0	1/1:3,0:18:22.21:139,22,0	1/1:2,1:22:53.36:332,53,0	1/1:3,15:20:38.43:405,38,0	1/1:3,20:25:69.03:735,69,0
chr10	96692942	.	C	CT	1418.25	PASS	AB=0.705;AC=34;AF=0.607;AN=56;BaseQRankSum=-4.722;DP=274;FS=12.433;HRun=14;HaplotypeScore=52.1032;InbreedingCoeff=0.4928;MQ=60.47;MQ0=13;MQRankSum=-1.120;QD=7.39;ReadPosRankSum=-3.553;VQSLOD=0.1706;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,8:15:22.63:183,23,0	0/0:4,0:4:5.48:0,5,27	0/0:11,0:7:0.31:0,0,15	0/0:6,0:5:2.74:0,3,19	0/0:9,0:9:15.68:0,16,74	0/1:9,3:11:7.48:82,0,7	1/1:3,2:5:3:26,3,0	1/1:18,2:23:20.49:116,20,0	1/1:5,3:8:11.74:91,12,0	0/1:4,5:10:20.68:76,0,21	1/1:11,3:14:14.03:130,14,0	1/1:1,3:4:6:53,6,0	1/1:5,3:8:5.97:46,6,0	0/1:3,3:6:4.29:76,0,4	0/0:10,0:9:13.41:0,13,68	0/1:5,3:8:4.35:77,0,4	0/0:9,0:12:8.10:0,8,23	0/0:4,0:7:7.91:0,8,23	1/1:7,1:9:8.52:52,9,0	1/1:11,1:13:20.37:130,20,0	1/1:8,0:9:14.19:76,14,0	1/1:3,1:4:3:26,3,0	1/1:3,3:6:2.62:26,3,0	1/1:3,1:4:5.83:33,6,0	0/0:11,0:11:10.60:0,11,61	0/0:9,0:8:14.49:0,14,81	1/1:5,2:9:14.95:96,15,0	1/1:9,1:18:38.89:204,39,0
chr10	96693031	.	T	TC	1449.32	PASS	AB=0.833;AC=33;AF=0.971;AN=34;BaseQRankSum=-1.733;DP=115;FS=0.000;HRun=5;HaplotypeScore=12.7779;InbreedingCoeff=-0.1438;MQ=23.17;MQ0=45;MQRankSum=1.056;QD=14.49;ReadPosRankSum=0.972;VQSLOD=0.9417;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,2:3:11.79:33,0,12	./.	./.	./.	1/1:4,3:3:6.02:79,6,0	1/1:5,3:6:6.02:79,6,0	1/1:5,4:5:12.04:158,12,0	1/1:8,10:15:24.08:316,24,0	1/1:0,1:1:3.01:39,3,0	1/1:0,2:2:6.02:79,6,0	1/1:0,2:2:6.02:73,6,0	1/1:4,1:1:3.01:39,3,0	./.	./.	1/1:1,2:3:3.01:39,3,0	./.	1/1:3,3:4:6.02:79,6,0	1/1:3,1:3:5.95:58,6,0	1/1:3,5:6:18.06:231,18,0	./.	./.	1/1:0,1:1:3.01:39,3,0	./.	./.	1/1:6,3:6:6.02:79,6,0	1/1:0,1:1:3.01:39,3,0	./.	1/1:3,2:3:6.02:72,6,0
chr10	96694069	.	T	TC	234.67	PASS	AB=0.807;AC=4;AF=0.077;AN=52;BaseQRankSum=1.388;DP=215;FS=2.204;HRun=1;HaplotypeScore=58.8530;InbreedingCoeff=-0.1118;MQ=81.63;MQ0=2;MQRankSum=-4.662;QD=6.34;ReadPosRankSum=0.548;VQSLOD=0.6065;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:30.07:0,30,386	./.	0/0:16,0:11:24.93:0,25,271	0/0:18,0:12:20.95:0,21,239	0/1:5,3:7:97.20:102,0,97	0/0:9,0:9:24.08:0,24,309	0/0:8,0:8:24.08:0,24,311	0/0:18,0:18:51.16:0,51,657	0/0:3,0:3:9.03:0,9,115	0/0:5,0:4:12.04:0,12,154	0/0:5,0:5:3.01:0,3,38	0/0:4,0:4:12.04:0,12,154	0/0:8,0:8:24.08:0,24,305	./.	0/1:8,6:14:99:132,0,270	0/0:2,0:2:6.02:0,6,78	0/0:1,0:1:3.01:0,3,39	0/0:3,0:3:9.03:0,9,115	0/0:11,0:11:30.10:0,30,386	0/0:3,0:3:6.02:0,6,77	0/0:13,0:13:30.08:0,30,371	0/0:4,0:4:9.03:0,9,115	0/0:13,0:13:18.06:0,18,230	0/0:9,0:9:9.03:0,9,116	0/1:7,0:7:0.01:0,0,176	0/1:6,2:8:97.96:98,0,142	0/0:6,0:6:15.05:0,15,193	0/0:5,0:5:15.05:0,15,193
chr10	96694077	.	TC	T	108.79	PASS	AB=0.750;AC=3;AF=0.058;AN=52;BaseQRankSum=2.655;DP=174;FS=2.790;HRun=1;HaplotypeScore=47.9424;InbreedingCoeff=-0.1251;MQ=75.25;MQ0=2;MQRankSum=-2.770;QD=4.18;ReadPosRankSum=1.317;VQSLOD=0.5205;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:26.15:0,26,428	./.	0/0:13,0:8:18.01:0,18,204	0/0:16,0:10:7.53:0,8,220	0/0:4,3:6:10.67:0,11,85	0/0:8,0:8:21.07:0,21,335	0/0:8,0:8:24.08:0,24,383	0/0:13,0:13:39.13:0,39,623	0/0:1,0:1:3.01:0,3,48	0/0:5,0:4:12.03:0,12,171	0/0:5,0:5:3.01:0,3,38	0/0:4,0:4:12.03:0,12,159	0/0:3,0:3:9.02:0,9,121	./.	0/1:5,6:11:87.37:87,0,209	0/0:2,0:2:6.02:0,6,95	0/0:1,0:1:3.01:0,3,48	0/0:2,0:2:6:0,6,71	0/0:7,0:7:18.06:0,18,288	0/0:2,0:2:3.01:0,3,48	0/0:8,0:8:18.03:0,18,227	0/0:3,0:3:6.02:0,6,86	0/0:9,0:9:11.09:0,11,167	0/0:8,0:8:6.02:0,6,96	0/1:6,1:7:24.87:25,0,176	0/1:5,3:8:93.48:93,0,194	0/0:5,0:5:15.05:0,15,229	0/0:5,0:5:15.05:0,15,239
chr10	96694852	.	C	CA	3027.43	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-3.979;DP=541;FS=0.452;HRun=2;HaplotypeScore=74.7853;InbreedingCoeff=0.9948;MQ=79.69;MQ0=0;MQRankSum=-2.894;QD=34.02;ReadPosRankSum=-0.283;VQSLOD=3.5577;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,1274	1/1:1,6:7:18.06:259,18,0	0/0:18,0:19:53.07:0,53,589	0/0:17,0:17:18.14:0,18,402	1/1:0,16:16:48.12:657,48,0	0/0:18,0:18:51.16:0,51,632	0/0:28,0:28:81.25:0,81,1002	0/0:28,0:28:78.24:0,78,956	0/0:19,0:19:54.17:0,54,663	0/0:22,0:22:63.20:0,63,781	0/0:10,0:10:30.08:0,30,359	0/0:16,0:16:45.14:0,45,557	0/0:22,0:22:60.19:0,60,739	0/0:20,0:20:54.15:0,54,652	1/1:1,30:31:69.23:993,69,0	0/0:13,0:13:39.12:0,39,483	0/0:24,0:24:66.21:0,66,813	0/0:17,0:17:42.11:0,42,505	0/0:22,0:22:66.15:0,66,785	0/0:11,0:11:30.09:0,30,372	0/0:34,0:34:96.28:0,96,1174	0/0:8,0:8:21.06:0,21,249	0/0:12,0:12:33.09:0,33,396	0/0:24,0:24:60.17:0,60,728	1/1:0,12:12:33.11:475,33,0	1/1:3,20:23:57.19:819,57,0	0/0:20,0:20:60.14:0,60,714	0/0:10,0:10:30.09:0,30,372
chr10	96694969	.	C	CTT	10538.92	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-1.469;DP=596;FS=12.590;HRun=7;HaplotypeScore=86.2662;InbreedingCoeff=0.9649;MQ=76.55;MQ0=2;MQRankSum=-0.927;QD=24.28;ReadPosRankSum=2.342;VQSLOD=2.7513;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:46:99:360,102,0	0/0:11,0:11:30.06:0,30,335	0/0:30,0:28:38:0,38,466	0/0:32,0:23:12.83:0,13,339	0/0:21,0:21:54.15:0,54,629	1/1:0,14:15:36.12:591,36,0	1/1:0,18:20:47.65:747,48,0	1/1:2,0:26:59.21:257,59,0	1/1:0,22:22:54.18:886,54,0	1/1:3,23:27:69.22:1105,69,0	1/1:2,19:22:60.16:950,60,0	1/1:5,20:25:57.19:930,57,0	1/1:3,14:18:39.13:640,39,0	1/1:2,16:18:42.14:676,42,0	0/0:20,0:20:39.09:0,39,454	1/1:3,0:11:17.47:62,17,0	1/1:3,0:22:44.92:158,45,0	1/1:1,0:12:29.94:105,30,0	1/1:5,0:18:34.81:148,35,0	1/1:3,1:18:35.45:164,35,0	1/1:4,0:25:44.92:158,45,0	1/1:2,17:18:42.14:680,42,0	1/1:3,15:18:39.05:581,39,0	1/1:2,26:28:72.25:1182,72,0	0/0:14,0:13:39.10:0,39,445	0/0:29,1:30:34.99:0,35,894	1/1:3,0:24:44.92:158,45,0	0/0:2,0:2:0.94:0,1,1
chr10	96695167	.	T	TTTTC	14625.77	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-4.336;DP=616;FS=1.254;HRun=0;HaplotypeScore=106.1366;InbreedingCoeff=0.8225;MQ=61.02;MQ0=2;MQRankSum=-2.500;QD=26.50;ReadPosRankSum=1.051;VQSLOD=4.2946;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,1:30:45.15:851,45,0	1/1:4,0:5:9.03:174,9,0	0/0:16,0:12:4.61:0,5,157	0/1:22,0:13:0.37:0,0,146	1/1:25,0:25:42.95:713,43,0	1/1:20,0:20:27.09:550,27,0	1/1:16,0:16:18.06:344,18,0	1/1:35,0:34:66:869,66,0	1/1:21,0:21:21.07:400,21,0	1/1:28,1:28:59.90:773,60,0	1/1:21,0:21:29.78:426,30,0	1/1:21,0:21:18.05:322,18,0	1/1:23,0:23:39.13:741,39,0	1/1:15,0:15:21.07:402,21,0	1/1:21,0:21:24.01:432,24,0	1/1:23,1:24:51.16:982,51,0	0/0:31,0:30:63.91:0,64,464	0/0:17,0:17:34.37:0,34,248	1/1:18,0:18:35.86:462,36,0	1/1:22,0:23:50.97:841,51,0	1/1:8,0:8:6.02:115,6,0	1/1:20,0:20:33.04:609,33,0	1/1:27,0:27:57.11:1074,57,0	1/1:21,0:21:21.07:402,21,0	1/1:26,3:30:51.17:1020,51,0	1/1:32,1:33:77.49:1070,77,0	1/1:26,0:26:36.11:705,36,0	1/1:18,0:18:18.06:347,18,0
chr10	96695179	.	C	CTTTCT	21179.27	PASS	AB=0.567;AC=48;AF=0.857;AN=56;BaseQRankSum=-8.133;DP=656;FS=0.535;HRun=0;HaplotypeScore=107.5121;InbreedingCoeff=0.4362;MQ=58.10;MQ0=2;MQRankSum=-1.410;QD=34.38;ReadPosRankSum=2.130;VQSLOD=4.8807;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:28:48.16:1243,48,0	1/1:2,4:7:9.50:251,9,0	0/0:13,0:9:20.29:0,20,218	0/0:27,0:13:14.70:0,15,176	0/1:7,21:30:0.41:964,0,0	1/1:1,20:22:26.79:773,27,0	0/1:3,10:18:19.38:464,0,19	1/1:7,33:42:99:1504,102,0	1/1:2,20:25:21.07:604,21,0	1/1:4,25:30:65.92:1020,66,0	1/1:3,18:24:25.56:675,26,0	1/1:0,20:23:18.02:452,18,0	1/1:4,19:23:39.13:1091,39,0	1/1:2,10:16:21.07:594,21,0	1/1:1,19:22:23.85:610,24,0	1/1:3,22:27:51.16:1388,51,0	0/1:5,0:32:11.86:12,0,382	0/1:6,0:16:16.40:16,0,211	1/1:1,14:18:50.84:784,51,0	1/1:8,23:32:43.27:1197,43,0	1/1:0,8:8:6.02:173,6,0	1/1:0,18:19:39.05:936,39,0	1/1:2,29:32:60.89:1595,61,0	1/1:2,18:21:24.08:692,24,0	1/1:5,19:26:51.16:1243,51,0	1/1:4,25:31:80.65:1347,81,0	1/1:3,21:29:35.33:1033,35,0	1/1:2,8:11:18.06:517,18,0
chr10	96695398	.	T	TTCTCTCTCTCTCTCTC	1645.73	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-0.425;DP=540;FS=4.332;HRun=0;HaplotypeScore=248.8016;InbreedingCoeff=0.6162;MQ=59.16;MQ0=18;MQRankSum=-2.744;QD=9.51;ReadPosRankSum=-1.619;VQSLOD=1.8269;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:32:3.01:48,3,0	1/1:9,0:7:9:121,9,0	0/0:19,0:11:11.97:0,12,356	0/0:22,0:18:6.02:0,6,188	1/1:28,0:28:8.19:171,8,0	0/0:21,0:19:10.71:0,11,763	0/0:18,0:16:24.08:0,24,1051	0/0:25,0:20:28.04:0,28,910	0/0:17,0:17:21.07:0,21,830	0/0:24,0:24:28.71:0,29,1132	0/0:24,0:24:14.15:0,14,1228	0/0:13,0:15:9.03:0,9,298	0/0:19,0:18:0.57:0,1,862	0/0:15,0:15:17.87:0,18,628	1/1:24,0:24:0.01:45,0,0	1/1:17,0:17:2.84:14,3,0	1/1:9,1:10:3.01:140,3,0	0/1:12,0:11:99:671,0,114	0/0:14,0:14:14.87:0,15,484	0/0:22,0:22:21.07:0,21,637	0/0:16,0:14:12.51:0,13,418	0/0:14,0:13:8.86:0,9,326	0/0:15,0:15:21.06:0,21,819	0/0:35,0:34:51.15:0,51,1703	1/1:19,0:19:2.96:25,3,0	1/1:18,0:16:17.55:576,18,0	0/0:22,0:19:21.07:0,21,645	0/0:9,0:8:9.03:0,9,335
chr10	96695418	.	CTCTGTGTGTGTGTGTGTGTGTGTGTGTGTG	C	4535.28	PASS	AB=0.962;AC=12;AF=0.214;AN=56;BaseQRankSum=3.792;DP=484;FS=1.338;HRun=0;HaplotypeScore=285.9032;InbreedingCoeff=0.6482;MQ=46.07;MQ0=22;MQRankSum=-1.206;QD=39.44;ReadPosRankSum=0.327;VQSLOD=3.2298;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:23:5.98:0,6,47	0/0:7,0:5:9:0,9,183	0/1:12,0:5:9.44:9,0,69	0/0:6,0:3:6:0,6,57	0/0:22,0:22:11.11:0,11,88	0/0:23,0:21:54.12:0,54,4710	0/0:22,0:19:35.96:0,36,2500	0/1:22,2:18:99:300,0,204	0/0:17,0:17:33.10:0,33,3243	0/0:25,0:24:72.18:0,72,5773	0/0:27,0:27:47.91:0,48,3844	0/0:12,0:12:15.01:0,15,760	0/0:16,0:15:12.18:0,12,1761	0/0:13,0:13:18.05:0,18,1451	0/0:21,0:21:15.01:0,15,555	0/0:12,0:12:8.08:0,8,109	0/0:11,0:9:12.51:0,13,1087	0/0:14,0:13:36.04:0,36,2245	1/1:9,8:15:5.84:510,6,0	1/1:1,18:19:21.07:1666,21,0	1/1:12,1:10:12:305,12,0	0/0:15,0:14:15.02:0,15,1077	0/0:17,0:17:30.09:0,30,2601	0/0:33,0:32:55.13:0,55,5716	0/0:16,0:16:5.95:0,6,48	0/0:14,0:12:32.21:0,32,835	1/1:0,23:23:21.07:1683,21,0	1/1:7,0:6:8.62:61,9,0
chr10	96695420	.	C	CTGTG	1281.25	PASS	AB=1.000;AC=16;AF=0.364;AN=44;BaseQRankSum=-6.192;DP=486;FS=1.954;HRun=0;HaplotypeScore=150.6535;InbreedingCoeff=0.2998;MQ=45.55;MQ0=23;MQRankSum=4.660;QD=5.88;ReadPosRankSum=-0.166;VQSLOD=2.8846;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:5:3.01:0,3,30	./.	./.	0/0:13,0:20:0.39:0,0,0	0/1:23,0:21:40.64:272,0,41	1/1:25,0:22:5.70:88,6,0	./.	0/0:16,0:17:13.24:0,13,147	0/1:28,0:26:46.98:56,0,47	1/1:19,9:29:1.09:162,1,0	1/1:12,1:13:3.01:30,3,0	0/1:18,0:17:3.32:105,0,3	1/1:9,3:13:3.01:70,3,0	0/1:12,0:22:11.61:12,0,47	0/0:5,0:10:3:0,3,29	0/0:10,0:8:9.02:0,9,92	0/0:14,0:13:9.36:0,9,92	0/0:15,0:13:3:0,3,28	0/0:19,0:19:21.02:0,21,193	0/0:13,0:10:0.47:0,0,1	1/1:5,6:12:5.81:84,6,0	0/0:18,0:18:2.50:0,2,41	1/1:31,2:33:32.45:541,32,0	./.	0/0:11,0:12:12.02:0,12,117	0/0:23,0:20:21.02:0,21,195	./.
chr10	96695533	.	CT	C	1119.56	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.026;DP=638;FS=1.419;HRun=3;HaplotypeScore=74.1466;InbreedingCoeff=0.9998;MQ=85.13;MQ0=0;MQRankSum=0.169;QD=31.10;ReadPosRankSum=-4.387;VQSLOD=1.7909;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1551	0/0:12,0:12:36.12:0,36,513	0/0:25,0:25:72.22:0,72,981	0/0:18,0:18:52.01:0,52,667	0/0:25,0:25:63.21:0,63,905	0/0:21,0:21:63.18:0,63,870	0/0:22,0:22:63.20:0,63,890	1/1:3,33:36:99:1214,99,0	0/0:21,0:21:63.21:0,63,905	0/0:30,0:30:87.29:0,87,1251	0/0:16,0:16:42.14:0,42,605	0/0:18,0:18:54.10:0,54,731	0/0:16,0:16:45.15:0,45,647	0/0:17,0:17:51.17:0,51,734	0/0:28,0:28:81.26:0,81,1150	0/0:20,0:20:57.16:0,57,799	0/0:28,0:28:81.27:0,81,1166	0/0:22,0:22:51.17:0,51,734	0/0:18,0:18:51.08:0,51,732	0/0:26,0:26:75.25:0,75,1079	0/0:19,0:19:57.18:0,57,801	0/0:19,0:19:57.19:0,57,810	0/0:33,0:33:90.28:0,90,1260	0/0:19,0:19:57.15:0,57,796	0/0:24,0:24:63.21:0,63,907	0/0:17,0:17:51.17:0,51,735	0/0:34,0:34:96.27:0,96,1335	0/0:16,0:16:44.18:0,44,611
chr10	96695747	.	G	GA	3019.91	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-9.488;DP=720;FS=2.937;HRun=8;HaplotypeScore=75.3505;InbreedingCoeff=0.9941;MQ=81.79;MQ0=1;MQRankSum=-1.312;QD=26.49;ReadPosRankSum=1.557;VQSLOD=4.5057;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,111,1016	1/1:1,10:11:27.08:312,27,0	0/0:22,0:22:44.29:0,44,376	0/0:22,0:23:15:0,15,348	1/1:3,21:25:54.36:572,54,0	0/0:18,0:18:51.03:0,51,467	0/0:26,0:26:69.01:0,69,626	0/0:31,1:32:46.41:0,46,676	0/0:29,0:29:78.02:0,78,709	0/0:38,0:38:99:0,102,927	0/0:22,0:22:48.02:0,48,438	0/0:28,0:28:77.98:0,78,705	0/0:19,0:19:51.01:0,51,462	0/0:22,0:22:63.03:0,63,576	1/1:2,30:31:84.22:969,84,0	0/0:26,0:27:80.08:0,80,720	0/0:45,0:45:99:0,120,1098	0/0:15,0:15:42.02:0,42,384	0/0:17,0:17:42:0,42,379	0/0:24,0:24:66.02:0,66,598	0/0:25,0:25:69.03:0,69,631	0/0:21,0:21:48.02:0,48,439	0/0:25,0:25:60.01:0,60,549	0/0:35,0:35:99:0,99,901	1/1:2,12:14:36.11:415,36,0	1/1:3,29:31:59.75:927,60,0	0/0:42,0:42:99:0,111,1006	0/0:8,0:8:18.01:0,18,165
chr10	96696737	.	AC	A	4240.04	PASS	AB=0.636;AC=21;AF=0.375;AN=56;BaseQRankSum=4.152;DP=584;FS=0.364;HRun=10;HaplotypeScore=71.4462;InbreedingCoeff=0.8978;MQ=73.12;MQ0=0;MQRankSum=-1.706;QD=18.93;ReadPosRankSum=4.936;VQSLOD=5.4150;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,4:32:7.96:0,8,505	0/1:3,4:7:0.15:89,0,0	0/0:21,0:18:13.67:0,14,141	0/0:20,0:17:15:0,15,164	1/1:7,20:27:62.98:546,63,0	0/0:26,0:26:62.66:0,63,640	0/0:33,3:36:26.11:0,26,719	1/1:11,13:24:41.55:328,42,0	0/0:12,1:13:9.93:0,10,293	0/0:19,0:19:39.09:0,39,416	0/0:12,0:12:29.98:0,30,314	0/0:25,0:25:51.07:0,51,534	0/0:19,0:19:47.54:0,48,461	0/0:14,2:16:13.01:0,13,346	1/1:7,8:15:41.63:352,42,0	0/0:17,0:17:39.11:0,39,431	0/0:8,0:21:5.85:0,6,47	0/0:6,0:20:8.85:0,9,79	1/1:5,11:16:11.81:329,12,0	1/1:4,21:25:62.72:526,63,0	1/1:8,14:22:32.53:285,33,0	0/0:15,1:16:13.06:0,13,370	0/0:19,1:20:11.77:0,12,336	0/0:25,2:27:19.94:0,20,625	1/1:5,27:32:43.53:596,44,0	1/1:4,15:19:44.95:383,45,0	1/1:3,25:28:68.98:598,69,0	1/1:1,8:9:23.99:208,24,0
chr10	96696835	.	A	ATT	6693.50	PASS	AB=0.957;AC=23;AF=0.411;AN=56;BaseQRankSum=2.333;DP=537;FS=5.805;HRun=9;HaplotypeScore=103.5826;InbreedingCoeff=0.8976;MQ=77.69;MQ0=1;MQRankSum=-2.310;QD=28.73;ReadPosRankSum=0.899;VQSLOD=4.7452;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,1073	0/0:15,0:15:36.06:0,36,383	0/0:17,0:15:19.50:0,19,255	0/0:19,0:18:4.03:0,4,214	0/0:21,0:21:48.07:0,48,498	1/1:0,19:22:60.17:866,60,0	1/1:3,18:22:51.17:766,51,0	0/0:23,0:23:51.09:0,51,530	1/1:3,9:12:31.92:467,32,0	1/1:9,14:23:42.10:583,42,0	1/1:4,16:22:50.57:684,51,0	1/1:4,15:19:42.14:645,42,0	1/1:3,11:15:35.60:484,36,0	1/1:4,11:15:10.65:310,11,0	0/0:7,0:7:18.02:0,18,184	0/0:16,0:16:39.07:0,39,415	0/0:27,0:27:81.19:0,81,854	0/0:21,0:21:60.11:0,60,626	0/0:16,0:16:30.03:0,30,312	0/0:22,0:22:47.82:0,48,491	0/0:11,0:11:33.06:0,33,342	1/1:3,11:16:38.56:514,39,0	1/1:3,18:22:47.56:648,48,0	1/1:3,19:23:45.15:693,45,0	0/0:15,0:15:35.78:0,36,346	0/1:21,1:22:32.16:32,0,513	0/0:20,0:20:54.06:0,54,550	0/0:14,0:14:42.11:0,42,447
chr10	96697317	.	T	TCCTATGTC	69042.34	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.252;DP=739;FS=20.849;HRun=0;HaplotypeScore=172.5182;InbreedingCoeff=0.9913;MQ=79.28;MQ0=0;MQRankSum=-12.540;QD=101.53;ReadPosRankSum=5.530;VQSLOD=4.1576;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,26:42:99:4274,102,0	1/1:0,11:12:33.11:1446,33,0	0/0:40,0:40:99:0,117,2957	0/0:19,0:19:57.11:0,57,1288	1/1:8,22:33:69.19:2803,69,0	1/1:3,11:17:39.13:1670,39,0	1/1:13,14:30:66.23:2815,66,0	1/1:21,14:38:99:3902,105,0	1/1:7,19:31:75.26:3074,75,0	1/1:7,23:31:87.28:3409,87,0	1/1:6,7:16:29.75:1231,30,0	1/1:6,17:25:69.24:2936,69,0	1/1:8,24:40:98.89:4171,99,0	1/1:9,21:32:78.27:3383,78,0	1/1:8,25:35:84.29:3556,84,0	1/1:7,26:36:87.01:3756,87,0	1/1:6,13:22:48.16:1933,48,0	1/1:9,9:18:45.15:1888,45,0	1/1:10,12:24:69.18:2629,69,0	1/1:8,17:27:66.23:2827,66,0	1/1:10,8:20:36.12:1537,36,0	1/1:7,14:21:54.19:2326,54,0	1/1:6,15:21:51.18:2187,51,0	1/1:5,14:22:48.16:2071,48,0	1/1:3,12:16:39.13:1708,39,0	1/1:5,16:26:78.23:2936,78,0	1/1:5,28:35:90.31:3919,90,0	1/1:4,3:7:15.05:652,15,0
chr10	96702467	.	G	GGTGTGTGTGTGTGTGTGTGTGT	7859.94	PASS	AB=0.904;AC=14;AF=0.250;AN=56;BaseQRankSum=3.515;DP=397;FS=9.646;HRun=0;HaplotypeScore=234.1415;InbreedingCoeff=0.4926;MQ=61.41;MQ0=13;MQRankSum=-7.263;QD=103.42;ReadPosRankSum=1.641;VQSLOD=3.3710;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:3.01:250,3,0	0/0:3,0:3:6.02:0,6,360	0/0:57,0:20:22.24:0,22,631	0/0:42,0:16:27.36:0,27,670	0/0:15,0:14:36.12:0,36,1744	0/0:16,0:16:33.11:0,33,1401	0/0:8,0:8:15.05:0,15,650	0/1:18,0:16:53.72:2031,0,54	0/0:13,0:13:36.12:0,36,1528	0/1:16,0:16:99:206,0,1550	0/0:17,0:17:42.14:0,42,2020	0/0:16,0:16:39.12:0,39,1821	0/0:13,0:13:24.08:0,24,650	0/0:10,0:10:15.05:0,15,591	0/0:16,0:16:24.08:0,24,933	1/1:8,0:7:21.07:1790,21,0	0/0:24,0:24:53.77:0,54,2225	0/0:12,0:12:36.02:0,36,1266	0/1:6,0:6:35.24:521,0,35	1/1:3,1:3:9.03:882,9,0	1/1:5,0:4:3.01:309,3,0	0/0:9,0:9:24.08:0,24,889	0/0:12,0:12:17.58:0,18,785	0/0:6,0:6:12.04:0,12,568	0/0:13,0:13:32.90:0,33,1389	0/0:19,0:19:36.09:0,36,1578	0/1:3,3:6:59.19:1005,0,59	1/1:4,1:7:12.04:865,12,0
chr10	96702476	.	GT	G	472.08	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=2.705;DP=365;FS=2.492;HRun=9;HaplotypeScore=87.1156;InbreedingCoeff=0.6790;MQ=66.39;MQ0=9;MQRankSum=-4.807;QD=5.62;ReadPosRankSum=0.726;VQSLOD=1.1433;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:1:2.97:20,3,0	0/0:3,0:3:6.02:0,6,69	0/1:54,0:22:14.11:14,0,266	0/0:47,0:22:32.89:0,33,348	0/0:12,0:13:26.40:0,26,281	0/0:16,0:16:28.45:0,28,247	0/0:8,0:8:12.78:0,13,168	1/1:4,11:13:33.49:302,33,0	0/0:12,0:12:29.53:0,30,289	0/0:14,0:14:35.63:0,36,364	0/0:17,0:18:38.90:0,39,427	0/0:15,0:15:42.02:0,42,448	0/0:12,0:13:24.11:0,24,175	0/0:9,0:9:8.91:0,9,104	0/0:17,0:17:32.96:0,33,342	0/0:0,2:2:0:0,0,0	0/0:23,1:24:27.75:0,28,558	0/0:15,0:15:5.56:0,6,277	1/1:0,2:2:6:55,6,0	1/1:0,2:2:2.99:27,3,0	0/0:2,2:3:1.25:0,1,3	0/0:7,0:7:21:0,21,226	0/0:11,0:11:24.03:0,24,257	0/0:6,0:6:6.90:0,7,72	0/0:12,0:12:27.59:0,28,275	0/0:14,0:14:9.70:0,10,354	1/1:1,4:5:14.80:122,15,0	1/1:1,3:4:11.75:94,12,0
chr10	96702742	.	GTA	G	249.78	PASS	AB=1.000;AC=5;AF=0.093;AN=54;BaseQRankSum=1.586;DP=316;FS=9.597;HRun=0;HaplotypeScore=56.7732;InbreedingCoeff=0.5769;MQ=53.89;MQ0=7;MQRankSum=1.224;QD=8.06;ReadPosRankSum=-0.635;VQSLOD=1.3743;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,9:11:15.52:221,16,0	0/0:3,0:3:3.01:0,3,57	0/0:23,0:12:15.82:0,16,302	0/1:16,0:4:11.95:12,0,101	0/0:5,0:5:6.02:0,6,92	0/0:15,0:15:44.71:0,45,746	0/0:11,0:11:30.07:0,30,475	0/0:22,0:18:43.62:0,44,307	0/0:17,0:17:48.13:0,48,770	0/0:21,0:21:63.09:0,63,1034	0/0:16,0:15:42.07:0,42,617	0/0:9,0:9:24.05:0,24,351	0/0:10,0:10:30.08:0,30,466	0/0:19,0:19:56.83:0,57,922	0/0:13,0:13:33.10:0,33,526	1/1:0,4:4:9.03:134,9,0	0/0:21,0:21:33.06:0,33,440	0/0:19,0:19:38.86:0,39,708	0/0:8,0:7:17.86:0,18,232	./.	0/0:4,0:4:11.76:0,12,110	0/0:5,0:5:9.03:0,9,150	0/0:12,0:12:20.89:0,21,481	0/0:5,0:5:15.03:0,15,230	0/0:12,0:12:12.04:0,12,185	0/0:8,0:8:24.08:0,24,389	0/0:2,0:2:6.02:0,6,70	0/0:5,0:5:9.03:0,9,129
chr10	96702773	.	CATAT	C	1041.66	PASS	AB=0.894;AC=14;AF=0.259;AN=54;BaseQRankSum=1.816;DP=258;FS=10.565;HRun=0;HaplotypeScore=53.9062;InbreedingCoeff=0.4827;MQ=74.85;MQ0=3;MQRankSum=4.415;QD=17.96;ReadPosRankSum=-3.711;VQSLOD=0.8859;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:9.50:143,10,0	0/0:5,0:5:2.98:0,3,25	0/0:10,0:7:12.04:0,12,222	0/0:13,0:6:15.05:0,15,229	0/0:4,0:4:5.98:0,6,49	0/0:22,0:22:55.24:0,55,1352	0/0:12,0:12:33.11:0,33,691	0/1:6,17:19:22.01:540,0,22	0/0:12,0:12:36.09:0,36,764	0/0:18,0:18:48.64:0,49,1235	0/0:16,0:16:42.13:0,42,992	0/0:11,0:11:33.09:0,33,689	0/0:9,0:9:27.09:0,27,640	0/0:15,0:15:42.14:0,42,1000	0/1:4,0:4:0.02:0,0,0	1/1:3,0:3:9.03:147,9,0	0/0:8,0:8:9.03:0,9,192	0/0:15,0:15:39.03:0,39,812	0/1:8,0:8:99:102,0,116	./.	1/1:2,0:2:6.02:96,6,0	0/0:8,0:8:21.07:0,21,378	0/0:7,0:7:18.06:0,18,389	0/0:7,0:7:21.07:0,21,404	1/1:8,0:8:0.47:1,0,0	0/0:1,0:1:3.01:0,3,83	1/1:3,0:3:9.03:143,9,0	0/1:2,0:2:19.38:19,0,49
chr10	96704075	.	T	TAA	10271.04	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=3.565;DP=611;FS=6.873;HRun=9;HaplotypeScore=85.1294;InbreedingCoeff=0.9963;MQ=69.89;MQ0=2;MQRankSum=-1.126;QD=35.42;ReadPosRankSum=-1.521;VQSLOD=4.3001;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,22:29:74.21:1056,74,0	1/1:2,6:8:21.07:317,21,0	0/0:24,0:19:26.49:0,26,251	0/0:21,0:18:15.52:0,16,255	1/1:4,23:28:69.19:1023,69,0	0/0:15,0:15:42.09:0,42,447	0/0:12,0:12:30.07:0,30,319	1/1:5,29:34:90.31:1382,90,0	0/0:14,0:14:42.11:0,42,447	0/0:39,0:39:99:0,111,1181	0/0:28,0:28:72.16:0,72,766	0/0:15,0:15:45.11:0,45,479	0/0:19,0:19:54.13:0,54,575	0/0:15,0:15:42.10:0,42,444	1/1:2,17:19:48.16:739,48,0	1/1:1,13:14:36.12:554,36,0	0/0:27,0:27:72.17:0,72,766	0/0:15,0:15:39.05:0,39,403	1/1:7,15:22:51.17:783,51,0	1/1:2,24:27:77.08:1022,77,0	1/1:1,15:17:29.59:424,30,0	0/0:20,0:20:51.12:0,51,543	0/0:32,0:33:80.92:0,81,842	0/0:22,0:22:51.10:0,51,543	1/1:2,22:25:62.70:932,63,0	1/1:7,15:24:19.23:690,19,0	1/1:5,18:25:54.64:794,55,0	1/1:3,14:17:36.12:554,36,0
chr10	96704159	.	G	GTTT	12781.70	PASS	AB=0.929;AC=27;AF=0.482;AN=56;BaseQRankSum=4.674;DP=581;FS=3.852;HRun=8;HaplotypeScore=94.2352;InbreedingCoeff=0.9562;MQ=70.79;MQ0=1;MQRankSum=-5.706;QD=44.38;ReadPosRankSum=-2.355;VQSLOD=4.5599;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:29:81.20:1409,81,0	1/1:3,5:8:21.03:383,21,0	0/0:14,0:13:17.22:0,17,270	0/1:12,0:11:0.36:0,0,97	1/1:9,17:27:69.09:1191,69,0	0/0:19,0:19:48.12:0,48,615	0/0:22,0:22:48.06:0,48,584	1/1:5,17:22:57.18:1068,57,0	0/0:13,0:13:33.10:0,33,434	0/0:33,0:33:90.27:0,90,1170	0/0:18,0:18:48.13:0,48,615	0/0:14,0:14:39.10:0,39,498	0/0:22,0:22:51.12:0,51,655	0/0:18,0:18:48.08:0,48,582	1/1:1,19:20:60.20:1126,60,0	1/1:5,13:17:45.15:855,45,0	0/0:30,0:30:81.23:0,81,1048	0/0:22,0:22:54.15:0,54,709	1/1:15,9:24:63.14:1125,63,0	1/1:13,10:24:60.12:976,60,0	1/1:5,9:14:33.09:598,33,0	0/0:19,0:19:48.13:0,48,609	0/0:24,0:24:63.17:0,63,812	0/0:25,0:25:75.20:0,75,966	1/1:12,21:34:90.23:1509,90,0	1/1:6,14:20:11.75:913,12,0	1/1:6,15:22:51.17:1002,51,0	1/1:3,9:12:33.07:625,33,0
chr10	96705476	.	A	AC	2481.53	PASS	AB=0.947;AC=25;AF=0.463;AN=54;BaseQRankSum=7.682;DP=400;FS=2.084;HRun=2;HaplotypeScore=71.6558;InbreedingCoeff=0.8514;MQ=49.00;MQ0=15;MQRankSum=-2.053;QD=12.66;ReadPosRankSum=-1.078;VQSLOD=2.0760;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:25,3:28:24.33:354,24,0	1/1:4,0:4:6.52:25,7,0	0/0:9,0:4:2.05:0,2,40	./.	1/1:11,1:11:10.82:71,11,0	0/0:14,0:14:16.58:0,17,286	0/0:12,0:12:29.60:0,30,221	1/1:24,3:26:59.80:558,60,0	0/0:15,0:13:32.69:0,33,263	0/0:14,0:12:31.52:0,32,302	0/0:15,0:15:41.12:0,41,398	0/0:13,0:12:35.46:0,35,308	0/0:15,0:15:30.17:0,30,298	0/0:12,0:12:26.74:0,27,232	1/1:13,1:14:14.79:206,15,0	0/1:17,1:17:8.41:171,0,8	0/0:30,0:26:68.77:0,69,564	0/0:12,0:12:32.83:0,33,259	1/1:18,2:18:44.73:379,45,0	1/1:14,0:13:16.69:163,17,0	1/1:11,0:9:5.19:45,5,0	0/0:9,0:8:20.98:0,21,231	0/0:13,0:13:33.17:0,33,294	0/0:15,0:14:29.61:0,30,227	1/1:8,0:8:14.06:63,14,0	1/1:17,3:18:48.63:409,49,0	1/1:7,2:9:12.42:127,12,0	1/1:11,0:9:12.01:121,12,0
chr10	96705478	.	C	CCA	3693.09	PASS	AB=0.778;AC=26;AF=0.464;AN=56;BaseQRankSum=6.697;DP=427;FS=1.439;HRun=0;HaplotypeScore=82.7011;InbreedingCoeff=0.8322;MQ=49.68;MQ0=14;MQRankSum=-2.760;QD=16.86;ReadPosRankSum=-1.127;VQSLOD=3.0287;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,19:29:32.31:539,32,0	1/1:4,0:4:7.53:34,8,0	0/0:13,0:5:5.16:0,5,35	0/1:6,0:4:0:1,0,0	1/1:13,0:12:16.06:95,16,0	0/0:14,0:14:16.57:0,17,349	0/0:10,0:11:32.51:0,33,261	1/1:7,15:24:66.08:787,66,0	0/0:14,0:13:32.72:0,33,318	0/0:15,0:16:11.66:0,12,331	0/0:15,0:16:41.23:0,41,487	0/0:12,0:13:35.75:0,36,391	0/0:12,0:16:37.99:0,38,382	0/0:12,0:12:26.83:0,27,278	1/1:16,0:16:12.31:211,12,0	0/1:4,12:19:16.89:300,0,17	0/0:12,0:26:68.92:0,69,656	0/0:6,0:12:32.87:0,33,290	1/1:7,14:20:43.59:464,44,0	1/1:9,8:20:20.57:355,21,0	1/1:4,5:11:9.28:92,9,0	0/0:8,0:7:20.99:0,21,291	0/0:12,0:14:31.85:0,32,367	0/0:13,0:14:32.65:0,33,286	1/1:8,0:8:14.18:93,14,0	1/1:19,0:17:49.43:402,49,0	1/1:6,6:13:5.42:138,5,0	1/1:4,6:9:11.63:183,12,0
chr10	96705493	.	AT	A	2593.06	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=8.010;DP=402;FS=10.440;HRun=1;HaplotypeScore=73.9190;InbreedingCoeff=0.8674;MQ=66.07;MQ0=5;MQRankSum=-2.890;QD=12.23;ReadPosRankSum=-1.258;VQSLOD=0.7600;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:46.21:234,46,0	1/1:5,0:5:14.08:95,14,0	0/0:23,0:14:31.69:0,32,294	0/1:11,0:7:1.54:2,0,17	1/1:13,0:12:24.48:170,24,0	0/0:15,0:15:16.26:0,16,286	0/0:7,0:7:10.55:0,11,129	1/1:28,1:29:73.50:477,74,0	0/0:14,0:13:19.84:0,20,263	0/0:15,0:15:25.48:0,25,388	0/0:14,0:14:33.86:0,34,393	0/0:11,0:11:23.28:0,23,272	0/0:16,0:16:35.04:0,35,309	0/0:7,0:7:17.76:0,18,179	1/1:12,3:15:35.34:277,35,0	0/1:16,0:16:6.84:106,0,7	0/0:23,1:20:11.09:0,11,69	0/0:12,0:12:24.13:0,24,140	1/1:16,0:15:37.06:238,37,0	1/1:22,0:21:53.92:358,54,0	1/1:12,0:11:17.84:120,18,0	0/0:10,0:9:24:0,24,258	0/0:13,0:13:30.99:0,31,293	0/0:9,0:9:9.74:0,10,160	1/1:12,0:12:29.72:206,30,0	1/1:18,2:18:46.84:347,47,0	1/1:10,0:10:19.20:116,19,0	1/1:7,0:7:12.80:67,13,0
chr10	96705627	.	TA	T	2888.91	PASS	AB=0.825;AC=23;AF=0.426;AN=54;BaseQRankSum=-10.182;DP=422;FS=5.707;HRun=11;HaplotypeScore=62.3258;InbreedingCoeff=0.7719;MQ=61.46;MQ0=1;MQRankSum=3.106;QD=15.62;ReadPosRankSum=1.025;VQSLOD=4.3890;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:29.76:0,30,218	0/0:4,0:4:8.89:0,9,64	./.	0/1:8,1:9:0.85:1,0,146	0/0:20,0:20:7.66:0,8,209	1/1:1,18:19:50.94:419,51,0	0/1:3,4:7:17:84,0,17	0/0:31,1:32:9.95:0,10,354	1/1:1,12:13:29.97:246,30,0	1/1:1,14:15:41.94:342,42,0	1/1:3,22:25:53.89:443,54,0	1/1:1,12:13:32.95:271,33,0	1/1:3,16:19:47.93:394,48,0	1/1:1,8:9:23.97:197,24,0	0/0:9,0:9:8.08:0,8,153	0/0:7,0:7:19.25:0,19,122	0/0:26,0:26:57.10:0,57,595	0/0:13,0:13:33.08:0,33,352	0/0:24,0:23:55.72:0,56,365	0/0:19,1:20:33.87:0,34,300	0/0:7,0:7:17.57:0,18,104	1/1:3,11:14:29.96:246,30,0	1/1:2,9:11:20.97:172,21,0	1/1:3,12:16:35:277,35,0	0/0:22,1:23:23.95:0,24,266	0/0:21,2:23:3.91:0,4,267	0/0:16,0:16:20.24:0,20,244	0/1:14,1:15:2.64:3,0,191
chr10	96705794	.	A	AAAGTTC	15304.92	PASS	AB=0.568;AC=24;AF=0.429;AN=56;BaseQRankSum=-4.287;DP=421;FS=16.250;HRun=0;HaplotypeScore=85.7344;InbreedingCoeff=0.8398;MQ=74.85;MQ0=0;MQRankSum=-15.465;QD=91.10;ReadPosRankSum=-2.912;VQSLOD=4.3210;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,5:9:24.08:781,24,0	1/1:1,3:4:12.04:364,12,0	0/0:13,0:13:33.04:0,33,724	0/0:9,0:9:21.90:0,22,422	1/1:3,8:11:27.07:872,27,0	0/0:21,0:21:57.20:0,57,1375	0/0:17,0:17:42.14:0,42,1029	1/1:13,12:30:84.19:2471,84,0	0/0:10,0:10:30.10:0,30,739	0/0:18,0:18:54.19:0,54,1330	0/0:21,0:21:60.21:0,60,1450	0/0:14,0:14:42.14:0,42,1030	0/0:17,0:17:51.13:0,51,1178	0/0:10,0:10:30.10:0,30,739	1/1:1,8:9:27.09:982,27,0	0/1:5,10:15:28.75:1306,0,29	0/0:23,0:23:61.59:0,62,1541	0/0:34,0:34:96.22:0,96,2203	1/1:6,14:23:43.23:2096,43,0	1/1:1,5:6:15.05:476,15,0	1/1:1,4:5:15.05:526,15,0	0/0:14,0:14:42.14:0,42,924	0/0:17,0:17:51.15:0,51,1205	0/0:15,0:15:39.13:0,39,934	1/1:0,8:8:24.08:877,24,0	0/1:3,19:21:7.68:2229,0,8	1/1:6,15:24:63.21:2106,63,0	1/1:0,2:2:6.02:219,6,0
chr10	96705875	.	GAAAA	G	5058.62	PASS	AB=0.778;AC=27;AF=0.482;AN=56;BaseQRankSum=-8.775;DP=480;FS=0.898;HRun=15;HaplotypeScore=94.4713;InbreedingCoeff=0.8976;MQ=73.29;MQ0=11;MQRankSum=-5.304;QD=27.79;ReadPosRankSum=1.318;VQSLOD=4.1553;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:18.03:245,18,0	1/1:0,5:5:9.03:122,9,0	0/0:63,0:29:45:0,45,571	0/0:47,0:16:17.58:0,18,314	1/1:2,12:14:36.09:490,36,0	0/0:2,0:20:37.12:0,37,242	0/0:6,0:16:35.40:0,35,250	1/1:10,23:34:65.69:807,66,0	0/0:3,0:12:26.46:0,26,169	0/0:5,0:15:24.45:0,24,172	0/0:4,0:15:27.49:0,27,211	0/0:2,0:15:27.37:0,27,176	0/0:1,0:15:27.37:0,27,176	0/0:4,0:13:27.43:0,27,179	1/1:2,13:15:36.07:490,36,0	1/1:6,3:10:14.86:187,15,0	0/0:7,0:24:52.63:0,53,681	0/0:10,0:27:50.95:0,51,595	1/1:4,8:14:33.03:415,33,0	1/1:1,9:10:24.05:327,24,0	1/1:2,14:16:30.03:404,30,0	0/1:5,1:7:31.95:32,0,34	0/0:1,0:5:11.70:0,12,68	0/0:0,0:11:26.32:0,26,153	1/1:0,5:5:12.04:164,12,0	1/1:1,14:16:39.01:514,39,0	1/1:5,17:23:55.32:738,55,0	1/1:3,2:5:8.97:123,9,0
chr10	96706092	.	A	AGGGGTTG	954.59	PASS	AB=0.750;AC=19;AF=0.380;AN=50;BaseQRankSum=-2.271;DP=215;FS=4.426;HRun=0;HaplotypeScore=76.5934;InbreedingCoeff=0.6383;MQ=76.48;MQ0=10;MQRankSum=-4.096;QD=23.86;ReadPosRankSum=-1.358;VQSLOD=2.7743;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:2.99:24,3,0	./.	0/0:16,0:13:24.08:0,24,552	0/0:17,0:16:33.11:0,33,803	1/1:1,2:4:6.02:230,6,0	0/0:13,0:13:39.13:0,39,950	0/0:13,0:11:18.06:0,18,438	1/1:7,0:5:5.94:44,6,0	0/0:3,0:3:6.02:0,6,146	0/0:9,0:6:9.03:0,9,204	0/0:5,0:5:15.01:0,15,312	0/0:11,0:11:27.08:0,27,609	./.	0/0:6,0:6:12.04:0,12,292	1/1:1,3:4:3.01:114,3,0	1/1:2,1:3:3.01:115,3,0	0/0:15,0:15:39.11:0,39,891	0/0:15,0:15:39.08:0,39,890	1/1:5,0:4:2.98:21,3,0	./.	0/1:4,2:5:32.02:106,0,32	0/0:11,0:11:24.08:0,24,585	0/0:9,0:9:24:0,24,528	0/0:19,0:19:51.14:0,51,1143	0/0:11,0:11:23.70:0,24,351	1/1:1,4:5:6.02:231,6,0	1/1:1,1:2:3.01:115,3,0	1/1:0,1:1:3.01:115,3,0
chr10	96706133	.	CGA	C	148.10	PASS	AB=0.667;AC=9;AF=0.237;AN=38;BaseQRankSum=2.292;DP=110;FS=0.000;HRun=0;HaplotypeScore=27.9615;InbreedingCoeff=0.4833;MQ=45.69;MQ0=13;MQRankSum=-3.242;QD=14.81;ReadPosRankSum=-0.100;VQSLOD=2.6166;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:3.01:45,3,0	./.	./.	./.	./.	0/0:7,0:7:18.06:0,18,348	0/0:14,0:9:18.95:0,19,348	1/1:3,2:2:6.02:90,6,0	./.	0/0:6,0:3:9.03:0,9,168	0/0:2,0:1:3:0,3,25	0/0:6,0:6:18.05:0,18,307	0/0:2,0:2:3.01:0,3,53	0/0:3,0:3:9.03:0,9,171	./.	0/1:1,1:2:31.38:39,0,31	0/0:8,0:8:21.07:0,21,397	0/0:11,0:10:24.08:0,24,463	./.	./.	0/0:3,0:1:3.01:0,3,58	0/0:6,0:6:18.05:0,18,311	0/0:3,0:3:9.02:0,9,141	0/0:12,0:12:36.12:0,36,694	0/0:9,1:10:27.09:0,27,341	1/1:0,1:1:3.01:46,3,0	./.	1/1:0,1:1:3.01:45,3,0
chr10	96706918	.	A	AG	2389.97	PASS	AB=1.000;AC=50;AF=0.926;AN=54;BaseQRankSum=-3.337;DP=156;FS=7.791;HRun=0;HaplotypeScore=136.8825;InbreedingCoeff=0.1606;MQ=30.11;MQ0=9;MQRankSum=1.367;QD=15.83;ReadPosRankSum=-0.299;VQSLOD=5.3012;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,2:9:12.36:98,12,0	1/1:3,0:3:5.93:40,6,0	./.	0/0:3,0:1:3.01:0,3,31	1/1:2,0:2:5.97:65,6,0	1/1:6,0:6:7.76:46,8,0	1/1:3,2:5:11.62:124,12,0	1/1:4,0:3:6.02:71,6,0	0/1:4,0:4:4.13:24,0,4	1/1:5,0:5:15.04:175,15,0	1/1:3,0:2:1.62:18,2,0	1/1:6,0:5:14.56:120,15,0	1/1:6,0:6:14.30:145,14,0	1/1:4,0:4:11.26:69,11,0	0/1:2,0:2:0.35:16,0,0	1/1:3,0:3:8.88:58,9,0	1/1:9,0:9:14.96:141,15,0	1/1:12,0:12:12.03:202,12,0	1/1:9,0:9:20.96:216,21,0	1/1:8,0:7:13.44:100,13,0	1/1:8,0:8:13.01:129,13,0	1/1:4,0:3:8.99:83,9,0	1/1:3,0:3:5.94:40,6,0	1/1:10,0:8:15.04:185,15,0	1/1:6,0:5:9.44:75,9,0	1/1:6,0:5:13.23:127,13,0	1/1:10,0:10:3.85:69,4,0	1/1:3,0:3:8.77:51,9,0
chr10	96707103	.	T	TTTCCTTTC	3065.12	PASS	AB=0.817;AC=19;AF=0.339;AN=56;BaseQRankSum=3.397;DP=510;FS=6.191;HRun=0;HaplotypeScore=123.5204;InbreedingCoeff=0.2247;MQ=63.67;MQ0=6;MQRankSum=0.952;QD=12.12;ReadPosRankSum=-0.834;VQSLOD=2.0125;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:26:62.60:0,63,517	1/1:1,0:10:3.01:115,3,0	0/0:37,0:17:31.14:0,31,300	0/0:20,0:9:2.11:0,2,65	1/1:13,0:13:29.86:278,30,0	0/0:16,0:16:44.95:0,45,684	0/0:25,0:25:71.91:0,72,899	0/0:35,0:34:90.65:0,91,736	0/1:10,0:15:99:171,0,188	0/1:6,0:12:48.19:48,0,109	0/1:8,0:14:47.94:48,0,119	0/0:7,0:17:35.72:0,36,482	0/0:17,0:17:50.34:0,50,725	0/0:5,0:9:20.89:0,21,288	1/1:16,0:17:50.79:610,51,0	0/0:4,0:9:17.96:0,18,231	0/1:26,0:31:99:123,0,515	0/1:14,0:25:38.63:39,0,227	0/1:21,0:21:99:116,0,288	0/1:10,0:10:23.52:24,0,162	0/1:11,0:11:66.94:118,0,67	0/0:7,0:7:18.01:0,18,327	0/0:11,0:11:26.69:0,27,317	0/0:12,0:12:30.04:0,30,574	1/1:16,0:23:59.51:599,60,0	1/1:0,18:21:59.64:719,60,0	0/1:16,0:27:99:240,0,227	0/0:16,0:16:38.92:0,39,358
chr10	96707645	.	A	AGG	5656.14	PASS	AB=0.785;AC=50;AF=0.893;AN=56;BaseQRankSum=-1.377;DP=511;FS=20.650;HRun=9;HaplotypeScore=128.7059;InbreedingCoeff=0.2832;MQ=77.62;MQ0=2;MQRankSum=-4.283;QD=12.14;ReadPosRankSum=-0.728;VQSLOD=1.2734;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,1:31:55:271,55,0	1/1:2,3:5:6.02:92,6,0	0/0:44,0:30:46.69:0,47,431	0/1:43,0:31:3.56:4,0,284	1/1:8,1:11:16.73:161,17,0	1/1:11,2:14:14.52:172,15,0	1/1:21,8:30:53.58:681,54,0	1/1:9,6:17:23.27:250,23,0	1/1:15,1:16:22.82:299,23,0	1/1:11,1:11:9.01:99,9,0	1/1:7,0:7:6.02:89,6,0	1/1:20,2:23:32.27:390,32,0	1/1:6,3:10:8.52:100,9,0	1/1:6,8:16:31.84:430,32,0	1/1:15,4:21:29.55:360,30,0	1/1:9,0:12:19.15:112,19,0	1/1:15,1:24:11.94:121,12,0	1/1:14,0:16:18:178,18,0	1/1:4,0:10:16.71:67,17,0	0/1:7,0:14:11.45:39,0,11	0/1:15,0:23:5.94:72,0,6	1/1:4,3:7:12.02:161,12,0	1/1:8,1:9:12.01:141,12,0	1/1:16,9:26:38.56:508,39,0	1/1:9,3:13:29.88:346,30,0	1/1:15,7:22:23.63:309,24,0	0/1:14,0:22:34.50:59,0,34	1/1:10,0:11:14.50:145,15,0
chr10	96707696	.	GA	G	2577.74	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-3.631;DP=501;FS=2.432;HRun=11;HaplotypeScore=83.7364;InbreedingCoeff=0.9204;MQ=62.58;MQ0=5;MQRankSum=-0.081;QD=12.16;ReadPosRankSum=3.136;VQSLOD=3.8020;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,24:36:67.89:543,68,0	1/1:0,0:5:6.11:18,6,0	0/0:37,1:17:26.96:0,27,266	0/0:44,0:23:22.55:0,23,199	1/1:5,0:19:26.47:77,26,0	0/0:4,0:16:25.60:0,26,129	0/0:8,0:18:34.67:0,35,212	1/1:1,16:17:41.93:342,42,0	0/0:3,0:15:20.04:0,20,111	0/0:9,0:20:39.74:0,40,226	0/0:0,0:14:34.15:0,34,182	0/0:10,0:18:32.07:0,32,177	0/0:3,0:9:20.01:0,20,105	0/0:8,0:20:39.09:0,39,243	1/1:2,0:13:20.36:59,20,0	1/1:1,10:11:20.97:172,21,0	0/0:18,0:18:38.93:0,39,393	0/0:13,0:13:36.09:0,36,382	1/1:2,10:12:24.50:238,24,0	1/1:6,9:15:1.24:211,1,0	1/1:3,16:19:44.92:369,45,0	0/0:2,0:17:48.81:0,49,276	0/0:1,0:6:14.83:0,15,89	0/0:10,0:19:46.14:0,46,281	1/1:3,0:11:15.89:47,16,0	1/1:2,0:19:2.45:58,2,0	1/1:4,5:9:23.90:190,24,0	1/1:2,23:26:58.94:473,59,0
chr10	96707839	.	C	CGTGT	1820.04	PASS	AB=0.753;AC=34;AF=0.810;AN=42;BaseQRankSum=-1.721;DP=522;FS=11.023;HRun=0;HaplotypeScore=98.8765;InbreedingCoeff=0.3961;MQ=72.96;MQ0=6;MQRankSum=0.310;QD=5.20;ReadPosRankSum=-1.834;VQSLOD=1.2249;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:30.05:393,30,0	1/1:3,0:3:0.47:1,0,0	./.	./.	./.	./.	0/1:17,0:20:5.96:6,0,36	1/1:26,0:26:2.76:7,3,0	1/1:8,0:13:5.49:24,5,0	1/1:15,0:15:1.54:25,2,0	1/1:5,0:5:3:25,3,0	1/1:13,0:13:6.01:64,6,0	1/1:18,0:18:8.89:112,9,0	1/1:29,0:29:15.03:231,15,0	1/1:22,0:22:6.02:116,6,0	1/1:9,0:9:3.01:43,3,0	0/0:18,0:17:2.49:0,2,6	0/0:21,0:21:12.02:0,12,165	./.	1/1:5,0:5:3.01:68,3,0	1/1:55,0:54:17.72:218,18,0	./.	0/1:7,3:14:0.05:0,0,0	1/1:18,5:26:12.04:248,12,0	0/0:6,0:7:2.90:0,3,16	1/1:17,0:17:2.13:5,2,0	1/1:22,0:22:23.75:348,24,0	./.
chr10	96708429	.	AG	A	2773.75	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=16.216;DP=536;FS=34.283;HRun=1;HaplotypeScore=98.3199;InbreedingCoeff=0.9578;MQ=52.93;MQ0=14;MQRankSum=-12.475;QD=12.55;ReadPosRankSum=-4.161;VQSLOD=-0.1276;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:43,0:43:89.91:571,90,0	1/1:7,0:7:15.91:91,16,0	0/0:16,0:4:6.45:0,6,32	0/0:14,0:5:3.03:0,3,29	1/1:15,2:16:30.59:212,31,0	0/0:16,0:16:48.10:0,48,524	0/0:15,0:15:45.07:0,45,477	1/1:21,0:21:56.33:362,56,0	0/0:13,0:13:38.98:0,39,398	0/0:21,0:21:61.98:0,62,680	0/0:13,0:13:39.08:0,39,420	0/0:19,0:19:57.10:0,57,631	0/0:15,0:15:38.57:0,39,364	0/0:22,0:21:62.28:0,62,619	1/1:10,1:10:26.86:146,27,0	1/1:12,0:12:29.72:175,30,0	0/0:41,0:41:99:0,117,1259	0/0:29,0:29:77.70:0,78,799	1/1:23,0:20:54.19:380,54,0	1/1:16,0:16:31.61:151,32,0	1/1:10,0:10:16.08:116,16,0	0/0:15,0:15:45:0,45,460	0/0:20,0:20:55.80:0,56,615	0/0:46,0:46:99:0,128,1355	1/1:18,1:19:46.16:282,46,0	1/1:17,0:17:38.77:215,39,0	1/1:18,0:17:40.79:201,41,0	1/1:6,1:6:17.35:100,17,0
chr10	96708434	.	A	AG	2887.75	PASS	AB=0.919;AC=21;AF=0.375;AN=56;BaseQRankSum=14.258;DP=546;FS=25.502;HRun=0;HaplotypeScore=105.0378;InbreedingCoeff=0.6115;MQ=54.52;MQ0=12;MQRankSum=-11.875;QD=12.95;ReadPosRankSum=-2.933;VQSLOD=1.9570;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:28,14:42:74.87:747,75,0	0/1:6,0:6:1.20:41,0,1	0/0:16,0:6:12.65:0,13,122	0/0:13,0:5:11.11:0,11,92	0/1:15,0:14:7.38:91,0,7	0/0:16,0:16:48.11:0,48,618	0/0:14,0:14:42.13:0,42,571	1/1:15,6:21:5.24:299,5,0	0/0:14,0:14:42.09:0,42,520	0/0:25,0:25:69.19:0,69,917	0/0:13,0:13:39.13:0,39,543	0/0:21,0:21:60.19:0,60,823	0/0:17,0:17:48.07:0,48,573	0/0:22,0:21:63.17:0,63,804	1/1:12,0:11:3.04:67,3,0	1/1:8,5:13:25.41:223,25,0	0/0:39,0:39:99:0,111,1501	0/0:31,0:31:81.24:0,81,1108	1/1:19,7:24:48.47:554,48,0	0/1:9,6:16:24.29:153,0,24	1/1:8,3:11:23.56:203,24,0	0/0:16,0:16:45.15:0,45,627	0/0:22,0:22:60.18:0,60,820	0/0:44,0:44:99:0,120,1659	0/1:16,2:18:5.67:133,0,6	0/1:17,0:17:16.13:91,0,16	1/1:12,6:17:5.10:319,5,0	1/1:5,2:7:19.91:163,20,0
chr10	96708438	.	GA	G	2801.85	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=10.056;DP=546;FS=1.652;HRun=10;HaplotypeScore=100.6222;InbreedingCoeff=0.3784;MQ=55.47;MQ0=11;MQRankSum=-2.491;QD=9.43;ReadPosRankSum=0.750;VQSLOD=2.7804;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:42:99:202,0,131	0/1:7,0:7:19.81:77,0,20	0/0:17,0:7:17.99:0,18,171	0/0:14,0:6:13.70:0,14,116	1/1:16,0:15:14.15:90,14,0	0/0:16,0:16:42.11:0,42,465	0/0:14,0:14:39.09:0,39,423	0/1:21,0:21:63.51:108,0,64	0/0:11,0:11:30.05:0,30,308	0/0:24,1:25:63.17:0,63,696	0/0:13,0:13:30.08:0,30,332	0/0:22,0:22:48.10:0,48,512	0/0:16,0:16:7.13:0,7,300	0/0:19,0:19:54.12:0,54,580	1/1:13,0:12:32.24:199,32,0	0/1:14,0:14:14.98:97,0,15	1/1:5,36:41:76.20:788,76,0	1/1:5,25:30:68.98:599,69,0	1/1:25,0:23:27.26:194,27,0	0/1:16,0:16:28.28:77,0,28	1/1:11,0:11:16.09:111,16,0	0/0:15,1:16:13.16:0,13,372	0/0:23,0:23:40.99:0,41,672	0/0:43,0:43:84.20:0,84,911	0/1:18,0:18:33.51:113,0,34	0/1:17,0:17:17.55:150,0,18	0/1:18,0:17:57.71:106,0,58	1/1:8,0:7:11.97:90,12,0
chr10	96708448	.	AG	A	4875.59	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=14.603;DP=501;FS=9.446;HRun=1;HaplotypeScore=80.8262;InbreedingCoeff=0.8507;MQ=63.61;MQ0=7;MQRankSum=-3.882;QD=19.35;ReadPosRankSum=0.995;VQSLOD=4.2208;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:33:45.47:601,45,0	1/1:0,5:5:15.05:196,15,0	0/0:20,0:11:30.55:0,31,353	0/0:16,0:9:20.22:0,20,194	1/1:0,11:11:20.97:235,21,0	0/0:16,0:16:48.12:0,48,632	0/0:19,0:19:54.07:0,54,630	1/1:1,16:17:45:499,45,0	0/0:12,0:12:27.06:0,27,341	0/0:27,0:27:78.21:0,78,1013	0/0:13,0:13:39.08:0,39,482	0/0:17,0:17:51.16:0,51,689	0/0:15,0:15:38.59:0,39,478	0/0:21,0:21:60.15:0,60,776	1/1:5,10:15:45.11:552,45,0	1/1:0,13:13:26.95:304,27,0	0/1:41,0:41:44.82:45,0,69	0/1:32,0:32:19.48:19,0,74	1/1:1,14:15:42.13:536,42,0	1/1:0,11:11:26.87:284,27,0	1/1:0,9:9:18.06:242,18,0	0/0:15,0:15:19.18:0,19,522	0/0:25,0:25:71.44:0,71,930	0/0:33,0:33:78.17:0,78,1037	1/1:2,9:11:27.02:340,27,0	1/1:7,9:16:39.82:482,40,0	1/1:1,10:11:26.97:312,27,0	1/1:1,11:11:18.06:227,18,0
chr10	96709201	.	TCC	T	6912.37	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=10.001;DP=450;FS=9.368;HRun=8;HaplotypeScore=66.4343;InbreedingCoeff=0.9909;MQ=82.39;MQ0=0;MQRankSum=-1.822;QD=27.32;ReadPosRankSum=2.935;VQSLOD=3.8294;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:66.20:805,66,0	1/1:0,12:12:27.08:329,27,0	0/0:22,1:22:38.54:0,39,583	0/0:19,1:18:10.29:0,10,573	1/1:1,11:12:30.09:366,30,0	0/0:18,0:18:51.15:0,51,793	0/0:21,0:21:51.16:0,51,837	1/1:6,18:24:50.97:505,51,0	0/0:14,0:14:39.11:0,39,582	0/0:12,0:12:36.12:0,36,596	0/0:10,0:10:27.09:0,27,453	0/0:17,0:17:48.16:0,48,785	0/0:10,0:10:30.10:0,30,503	0/0:11,0:11:30.10:0,30,504	1/1:2,18:20:42.13:512,42,0	1/1:0,9:9:24.08:293,24,0	1/1:1,19:20:48.15:585,48,0	1/1:1,11:12:30.09:366,30,0	1/1:5,17:22:51.13:607,51,0	1/1:2,6:8:18.05:219,18,0	1/1:2,21:23:54.17:659,54,0	0/0:11,0:11:32.85:0,33,516	0/0:11,0:11:33.07:0,33,481	0/0:19,0:19:48.15:0,48,760	1/1:0,18:18:42.13:512,42,0	1/1:0,17:17:51.12:605,51,0	1/1:1,13:14:24.07:293,24,0	1/1:2,11:13:21.06:256,21,0
chr10	96709326	.	TA	T	2268.59	PASS	AB=0.713;AC=16;AF=0.286;AN=56;BaseQRankSum=4.016;DP=495;FS=0.000;HRun=12;HaplotypeScore=61.2471;InbreedingCoeff=0.7551;MQ=77.88;MQ0=2;MQRankSum=0.211;QD=11.69;ReadPosRankSum=-0.552;VQSLOD=2.9973;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:37:49.41:523,49,0	0/0:6,0:6:17.97:0,18,169	0/0:36,0:24:19.85:0,20,217	0/0:21,0:12:17.99:0,18,161	0/0:14,0:14:35.86:0,36,328	0/1:15,4:21:36.17:36,0,362	0/0:11,0:11:27.04:0,27,267	1/1:8,17:27:48.80:351,49,0	0/0:9,1:10:3.82:0,4,220	0/0:25,1:26:34.01:0,34,542	0/0:15,0:15:7.39:0,7,202	0/0:11,1:12:6.85:0,7,251	0/0:9,0:10:20.87:0,21,191	0/0:12,0:13:32.90:0,33,319	0/0:16,1:18:24.67:0,25,407	1/1:4,8:12:17.91:139,18,0	0/0:2,0:21:42.61:0,43,214	0/0:3,0:16:37.08:0,37,194	0/1:5,12:17:21.88:212,0,22	1/1:4,13:18:41.75:313,42,0	1/1:2,24:26:41.83:325,42,0	0/0:12,0:12:24.05:0,24,244	0/0:10,0:11:23.87:0,24,220	0/0:18,1:19:24.82:0,25,423	0/0:12,0:12:7.09:0,7,224	0/0:17,0:17:38.91:0,39,374	1/1:4,13:18:16.41:300,16,0	1/1:2,13:17:36.94:267,37,0
chr10	96709754	.	A	ATT	3125.99	PASS	AB=0.599;AC=35;AF=0.625;AN=56;BaseQRankSum=4.639;DP=520;FS=8.555;HRun=13;HaplotypeScore=78.4352;InbreedingCoeff=0.4933;MQ=71.57;MQ0=0;MQRankSum=-0.888;QD=7.70;ReadPosRankSum=0.426;VQSLOD=0.7134;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,29:41:75.32:891,75,0	0/0:10,0:11:17.82:0,18,202	0/0:11,0:10:18.36:0,18,126	0/0:18,0:12:5.61:0,6,38	0/0:28,0:30:40.46:0,40,430	0/1:5,1:19:2.95:78,0,3	0/1:10,1:22:25.58:75,0,26	0/1:10,2:26:8.40:149,0,8	1/1:2,0:14:15.86:55,16,0	1/1:5,0:19:16.72:120,17,0	0/1:5,0:16:3.09:52,0,3	1/1:1,0:22:27.07:95,27,0	0/1:4,0:14:8.46:34,0,8	0/1:6,0:17:8.46:34,0,8	0/0:13,0:13:26.91:0,27,237	1/1:3,12:16:22.89:248,23,0	1/1:8,13:21:3.66:319,4,0	1/1:10,7:19:17.55:404,18,0	1/1:4,0:19:30.73:117,31,0	1/1:7,0:25:45.61:187,46,0	1/1:6,0:20:27.45:95,27,0	1/1:5,1:17:12.78:72,13,0	1/1:2,0:16:32.44:112,32,0	1/1:2,0:7:9.98:35,10,0	0/0:17,0:18:26.64:0,27,281	0/0:11,0:11:20.96:0,21,185	0/1:6,0:24:5.31:80,0,5	1/1:3,0:11:19.23:67,19,0
chr10	96711032	.	T	TG	107.14	PASS	AB=0.756;AC=2;AF=0.036;AN=56;BaseQRankSum=4.199;DP=542;FS=1.525;HRun=0;HaplotypeScore=84.7604;InbreedingCoeff=-0.0434;MQ=69.40;MQ0=0;MQRankSum=4.210;QD=5.95;ReadPosRankSum=-1.354;VQSLOD=2.8090;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.19:0,63,846	0/0:1,0:1:3.01:0,3,42	0/1:7,4:10:99:132,0,119	0/1:5,2:6:31.56:64,0,32	0/0:27,0:27:81.19:0,81,1073	0/0:24,0:24:72.14:0,72,923	0/0:16,0:16:48.08:0,48,616	0/0:24,0:24:69.02:0,69,888	0/0:13,0:13:39.04:0,39,470	0/0:17,0:17:50.92:0,51,594	0/0:22,0:22:65.66:0,66,791	0/0:26,0:26:78.13:0,78,984	0/0:22,0:22:65.75:0,66,820	0/0:18,0:18:47.84:0,48,586	0/0:16,0:16:45.14:0,45,611	0/0:16,0:16:45.13:0,45,598	0/0:24,0:24:69.19:0,69,907	0/0:24,0:24:66.22:0,66,922	0/0:21,0:21:60.10:0,60,770	0/0:37,0:37:99:0,107,1323	0/0:5,0:5:15.05:0,15,209	0/0:21,0:21:59.98:0,60,700	0/0:24,0:24:71.99:0,72,909	0/0:15,0:15:44.88:0,45,584	0/0:23,0:23:69.20:0,69,917	0/0:27,0:27:78.23:0,78,1040	0/0:26,0:26:78.16:0,78,977	0/0:11,0:11:33.06:0,33,406
chr10	96711201	.	CCTCCTTTTAGTTCCTGACATATG	C	10392.74	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.849;DP=480;FS=5.006;HRun=0;HaplotypeScore=282.1986;InbreedingCoeff=0.9645;MQ=86.92;MQ0=0;MQRankSum=-11.119;QD=90.37;ReadPosRankSum=4.868;VQSLOD=4.0529;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,8:16:17.44:1144,17,0	1/1:0,7:7:21.07:1336,21,0	0/0:22,0:22:60.21:0,60,3820	0/0:20,0:20:51.94:0,52,3870	1/1:6,9:15:8.67:401,9,0	0/0:19,0:19:54.19:0,54,5491	0/0:32,0:32:93.30:0,93,9038	0/0:20,0:20:57.20:0,57,4104	0/0:14,0:14:42.14:0,42,4289	0/0:21,0:21:60.21:0,60,4894	0/0:15,0:15:45.14:0,45,3816	0/0:21,0:21:57.18:0,57,4978	0/0:16,0:16:45.15:0,45,4691	0/0:22,0:22:66.23:0,66,6419	1/1:5,15:20:27.09:1598,27,0	1/1:2,10:12:24.08:1527,24,0	1/1:5,15:20:33.11:2099,33,0	1/1:3,5:8:6.02:382,6,0	0/0:19,0:19:57.18:0,57,4429	0/0:21,0:21:63.22:0,63,5649	0/0:24,0:24:72.23:0,72,6643	0/0:17,0:17:51.16:0,51,4592	0/0:14,0:14:42.14:0,42,3754	0/0:25,0:25:69.24:0,69,6520	1/1:1,7:8:18.06:1144,18,0	1/1:3,6:9:12.04:763,12,0	0/0:14,0:14:42.14:0,42,4014	0/0:9,0:9:27.09:0,27,2419
chr10	96711886	.	G	GGTGTATGTATATGT	2790.80	PASS	AB=0.813;AC=19;AF=0.339;AN=56;BaseQRankSum=7.465;DP=795;FS=31.427;HRun=0;HaplotypeScore=295.3884;InbreedingCoeff=0.3162;MQ=58.10;MQ0=17;MQRankSum=-7.289;QD=8.78;ReadPosRankSum=-6.921;VQSLOD=-0.0262;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:35:26.91:210,27,0	1/1:6,8:18:8.86:375,9,0	0/0:41,0:22:48.14:0,48,1030	0/0:33,0:17:43.37:0,43,907	1/1:14,1:15:2.87:24,3,0	0/0:10,0:11:27.09:0,27,755	0/0:41,0:43:99:0,114,3525	0/1:31,0:36:99:197,0,1481	0/0:32,0:33:90.26:0,90,2471	0/0:26,0:28:81.17:0,81,2291	0/0:19,0:20:48.15:0,48,1309	0/0:27,0:31:81.16:0,81,2581	0/0:32,0:34:86.23:0,86,2527	0/0:31,0:32:87.21:0,87,2323	1/1:15,16:36:11.85:126,12,0	0/1:9,0:27:19.45:19,0,317	1/1:5,0:21:12.37:180,12,0	0/1:16,0:15:47.83:48,0,158	0/1:21,0:27:99:285,0,775	0/0:10,0:14:1.11:0,1,146	0/0:60,0:75:57.07:0,57,1852	0/0:20,0:24:60.15:0,60,1755	0/0:22,0:24:60.06:0,60,1741	0/0:26,0:29:69.69:0,70,2143	1/1:10,21:35:0.47:1,0,0	0/1:11,11:28:35.03:1367,0,35	0/1:4,0:11:55.93:56,0,252	0/1:7,0:8:78.53:79,0,229
chr10	96711958	.	GTC	G	1666.93	PASS	AB=0.759;AC=14;AF=0.250;AN=56;BaseQRankSum=4.734;DP=693;FS=27.726;HRun=0;HaplotypeScore=147.8571;InbreedingCoeff=0.5648;MQ=64.59;MQ0=13;MQRankSum=-2.100;QD=10.69;ReadPosRankSum=4.446;VQSLOD=1.5009;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,9:13:6.02:82,6,0	0/1:6,6:11:15.33:131,0,15	0/0:42,0:24:28.93:0,29,550	0/0:57,0:32:40.37:0,40,595	1/1:7,15:20:15.05:206,15,0	0/0:22,0:22:42.13:0,42,705	0/0:31,0:31:54.18:0,54,936	0/0:36,0:34:99:0,102,1696	0/0:30,0:30:72.21:0,72,1200	0/0:37,0:37:93.28:0,93,1602	0/0:16,0:16:36.11:0,36,610	0/0:22,0:22:48.11:0,48,817	0/0:24,0:24:63.09:0,63,1006	0/0:30,0:29:72.23:0,72,1227	1/1:5,15:20:24.08:330,24,0	0/1:7,22:29:84.36:143,0,84	0/1:6,2:7:6.80:52,0,7	0/1:6,0:6:29.44:54,0,29	0/0:28,0:27:69.23:0,69,1156	0/0:18,0:18:54.18:0,54,922	0/0:50,0:50:84.25:0,84,1427	0/0:24,0:23:59.23:0,59,989	0/0:15,0:15:39.09:0,39,600	0/0:27,0:27:65.15:0,65,1032	1/1:9,16:24:14.06:205,14,0	1/1:5,16:21:1.85:637,2,0	0/0:15,0:14:33.11:0,33,577	0/0:13,0:13:39.11:0,39,633
chr10	96711960	.	C	CTCTG	503.42	PASS	AB=0.859;AC=5;AF=0.089;AN=56;BaseQRankSum=4.283;DP=709;FS=6.248;HRun=0;HaplotypeScore=183.1250;InbreedingCoeff=0.0176;MQ=63.50;MQ0=13;MQRankSum=-3.424;QD=5.79;ReadPosRankSum=-2.062;VQSLOD=2.0786;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:5.96:0,6,44	0/0:12,0:11:11.06:0,11,81	0/0:42,0:24:31.38:0,31,575	0/0:58,0:33:45.17:0,45,663	0/0:22,0:20:14.91:0,15,110	0/0:22,0:22:42.13:0,42,723	0/0:31,0:31:54.05:0,54,960	0/0:37,0:35:99:0,102,1773	0/0:31,0:31:72.20:0,72,1249	0/0:39,0:39:93.19:0,93,1663	0/0:16,0:16:36.11:0,36,623	0/0:22,0:22:48.11:0,48,833	0/0:25,0:25:63.04:0,63,993	0/0:30,0:29:72.03:0,72,1300	0/1:20,0:20:59.54:60,0,94	0/1:29,0:29:3.78:4,0,120	0/1:6,3:8:12.01:133,0,12	0/1:1,5:6:5.06:331,0,5	0/0:28,0:27:72.24:0,72,1232	0/0:18,0:18:54.18:0,54,966	0/0:51,0:51:87.73:0,88,1516	0/0:25,0:24:57.18:0,57,1023	0/0:17,0:17:42.09:0,42,631	0/0:28,0:28:66.10:0,66,1119	0/0:26,0:25:15.20:0,15,112	0/1:23,0:23:88.08:88,0,220	0/0:15,0:14:33.11:0,33,612	0/0:13,0:13:39.11:0,39,657
chr10	96711980	.	G	GTGTC	11761.03	PASS	AB=0.979;AC=24;AF=0.429;AN=56;BaseQRankSum=-12.058;DP=729;FS=2.399;HRun=0;HaplotypeScore=145.7292;InbreedingCoeff=0.7816;MQ=57.50;MQ0=13;MQRankSum=3.758;QD=32.40;ReadPosRankSum=4.114;VQSLOD=4.6863;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:2.96:0,3,19	0/0:11,0:11:3.42:0,3,39	0/0:43,0:19:30.36:0,30,493	0/0:48,0:26:39.10:0,39,648	0/0:18,0:17:3:0,3,25	1/1:4,22:28:36.02:866,36,0	1/1:10,19:30:10.93:292,11,0	0/0:37,0:35:51.15:0,51,769	1/1:8,24:33:57.09:1331,57,0	1/1:7,38:46:67.84:2513,68,0	1/1:4,13:18:18.06:440,18,0	1/1:5,19:24:42.14:1010,42,0	1/1:3,17:22:42.14:1019,42,0	1/1:8,22:34:53.55:1254,54,0	0/1:17,0:16:0.10:0,0,0	0/0:25,0:25:9.28:0,9,108	0/0:8,0:7:6.32:0,6,59	0/0:6,0:6:8.93:0,9,71	0/0:21,0:19:32.59:0,33,480	0/0:21,0:21:60.19:0,60,966	0/0:56,0:56:78.72:0,79,1252	1/1:9,23:32:54.19:1300,54,0	1/1:2,17:21:24.55:589,25,0	1/1:9,24:35:42.14:1029,42,0	0/0:27,0:26:5.77:0,6,49	0/1:22,1:22:99:116,0,195	0/0:19,0:19:42.10:0,42,614	0/0:13,0:13:39.13:0,39,643
chr10	96712216	.	G	GC	10364.11	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-9.495;DP=769;FS=3.637;HRun=3;HaplotypeScore=75.9354;InbreedingCoeff=0.9968;MQ=73.19;MQ0=1;MQRankSum=-2.234;QD=38.39;ReadPosRankSum=2.441;VQSLOD=5.3694;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,50:52:99:2050,147,0	1/1:0,9:9:24.08:336,24,0	0/0:15,0:15:42.13:0,42,498	0/0:20,0:18:48.14:0,48,573	1/1:0,14:14:33.11:462,33,0	0/0:26,0:26:72.22:0,72,864	0/0:37,0:37:99:0,105,1248	0/0:24,0:24:69.19:0,69,808	0/0:21,0:21:57.16:0,57,672	0/0:38,0:38:99:0,108,1278	0/0:8,0:8:24.06:0,24,278	0/0:27,0:27:81.24:0,81,960	0/0:27,0:27:78.24:0,78,935	0/0:33,0:33:96.27:0,96,1138	1/1:1,30:31:81.27:1134,81,0	1/1:1,16:17:45.15:629,45,0	1/1:2,53:55:99:2142,154,0	1/1:1,36:37:99:1470,105,0	0/0:25,0:25:69.21:0,69,826	0/0:8,0:8:18.05:0,18,216	0/0:60,0:59:99:0,171,2023	0/0:27,0:27:81.24:0,81,960	0/0:22,0:22:63.15:0,63,720	0/0:44,0:44:99:0,129,1512	1/1:1,25:26:66.22:923,66,0	1/1:0,29:29:87.29:1217,87,0	0/0:31,0:31:93.25:0,93,1090	0/0:6,0:6:18.06:0,18,215
chr10	96712947	.	T	TC	5119.52	PASS	AB=0.996;AC=23;AF=0.411;AN=56;BaseQRankSum=-16.005;DP=658;FS=13.918;HRun=0;HaplotypeScore=122.5033;InbreedingCoeff=0.5502;MQ=71.91;MQ0=3;MQRankSum=6.930;QD=14.10;ReadPosRankSum=-0.217;VQSLOD=5.4423;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:46.61:0,47,302	0/0:8,0:8:20.48:0,20,130	0/0:50,0:32:62.63:0,63,642	0/0:34,0:20:33.40:0,33,341	0/0:32,0:31:73.92:0,74,499	0/1:27,0:27:13.63:30,0,14	0/0:21,0:21:0.97:0,1,22	1/1:1,32:33:93.57:1009,94,0	0/1:28,0:28:30.29:74,0,30	1/1:24,0:24:19.38:115,19,0	1/1:18,0:18:8.38:118,8,0	0/1:33,0:33:8.48:51,0,8	0/0:13,0:13:10.21:0,10,25	0/1:13,0:13:1.63:37,0,2	0/0:22,0:22:62.13:0,62,438	0/0:22,0:22:51.85:0,52,348	0/0:21,0:21:33.18:0,33,214	0/0:16,0:16:23.70:0,24,145	1/1:3,24:27:81.03:878,81,0	1/1:1,14:15:41.35:508,41,0	1/1:3,12:15:31.91:425,32,0	0/1:13,0:13:0.68:32,0,1	0/1:22,0:22:1.62:86,0,2	0/1:34,1:35:16.71:39,0,17	0/0:16,0:16:32.46:0,32,233	0/0:20,0:20:45.50:0,46,340	1/1:1,43:44:99:1331,105,0	1/1:0,16:16:30.10:388,30,0
chr10	96712957	.	T	TTTTTC	437.09	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=7.114;DP=575;FS=1.306;HRun=0;HaplotypeScore=165.0447;InbreedingCoeff=0.0363;MQ=74.23;MQ0=3;MQRankSum=-6.551;QD=2.91;ReadPosRankSum=-3.367;VQSLOD=1.4958;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:33.50:42,0,33	0/1:3,0:3:19.97:27,0,20	0/0:44,0:31:67.61:0,68,655	0/1:32,0:19:23.23:23,0,201	0/1:14,0:14:86.35:118,0,86	0/0:28,0:28:81.17:0,81,1368	0/0:23,0:23:59.69:0,60,1078	0/0:28,0:28:74.78:0,75,813	0/0:25,0:25:75.22:0,75,1270	0/0:24,0:24:72.21:0,72,1219	0/0:13,0:13:39.13:0,39,699	0/0:31,0:31:93.29:0,93,1643	0/0:13,0:13:39.12:0,39,680	0/0:14,0:14:35.76:0,36,596	0/1:19,0:19:59.19:59,0,69	0/1:18,0:18:51.24:76,0,51	1/1:1,6:13:3.01:68,3,0	1/1:2,0:13:2.21:101,2,0	0/0:20,0:21:62.49:0,62,691	0/0:17,0:17:51.09:0,51,554	0/0:17,0:17:45.11:0,45,546	0/0:13,0:13:39.11:0,39,656	0/0:20,0:20:60.16:0,60,992	0/0:35,0:35:99:0,105,1830	0/1:8,0:8:21.26:21,0,66	0/1:16,0:16:49.45:49,0,139	0/0:48,0:48:99:0,128,1363	0/0:11,0:11:30.08:0,30,339
chr10	96715393	.	G	GA	9871.84	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-15.602;DP=719;FS=0.952;HRun=0;HaplotypeScore=71.4623;InbreedingCoeff=0.9840;MQ=88.10;MQ0=0;MQRankSum=-2.482;QD=42.19;ReadPosRankSum=3.813;VQSLOD=5.5342;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:84.29:1342,84,0	1/1:0,15:15:36.12:575,36,0	0/0:33,0:33:87.26:0,87,1080	0/0:24,0:23:67.54:0,68,840	1/1:0,22:22:63.21:1006,63,0	0/0:21,0:21:63.19:0,63,862	0/0:26,0:26:78.26:0,78,1089	0/0:32,0:32:93.28:0,93,1252	0/0:26,0:26:75.25:0,75,1040	0/0:26,0:26:75.24:0,75,1028	0/0:15,0:15:45.14:0,45,611	0/0:26,0:26:78.26:0,78,1077	0/0:24,0:24:72.23:0,72,989	0/0:30,0:30:90.23:0,90,1221	1/1:1,37:38:99:1696,108,0	1/1:0,32:32:81.28:1295,81,0	1/1:0,36:36:93.32:1486,93,0	1/1:0,25:25:72.25:1151,72,0	0/0:23,0:23:69.23:0,69,956	0/0:18,0:18:51.16:0,51,694	0/0:57,0:57:99:0,172,2337	0/0:24,0:24:66.19:0,66,900	0/0:15,0:15:42.10:0,42,565	0/0:28,0:28:84.24:0,84,1152	1/1:0,15:15:42.14:671,42,0	1/1:1,15:16:6.19:649,6,0	0/0:24,0:24:72.24:0,72,1005	0/0:13,0:13:39.12:0,39,529
chr10	96716724	.	GA	G	8266.51	PASS	AB=0.571;AC=48;AF=0.857;AN=56;BaseQRankSum=-1.157;DP=511;FS=10.179;HRun=11;HaplotypeScore=72.8914;InbreedingCoeff=0.3215;MQ=70.28;MQ0=0;MQRankSum=-2.740;QD=17.44;ReadPosRankSum=4.302;VQSLOD=5.3762;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,30:40:54.05:638,54,0	1/1:0,6:6:14.98:123,15,0	0/0:16,0:17:8.06:0,8,111	0/0:17,1:17:11.94:0,12,96	1/1:6,13:21:45.99:356,46,0	1/1:1,19:21:55.98:449,56,0	1/1:2,19:21:53.92:443,54,0	1/1:8,10:19:29.77:235,30,0	1/1:1,6:7:17.98:147,18,0	1/1:7,11:18:0.94:214,1,0	1/1:1,20:21:56.85:460,57,0	1/1:2,11:13:29.96:246,30,0	1/1:2,5:7:14.98:123,15,0	1/1:2,12:14:35.95:296,36,0	1/1:5,13:18:44.91:364,45,0	1/1:3,18:22:55.93:449,56,0	1/1:8,30:40:58.54:648,59,0	0/1:5,11:16:25.01:232,0,25	0/1:5,13:19:19.77:257,0,20	1/1:0,20:20:59.89:487,60,0	0/1:4,12:16:37:145,0,37	1/1:1,10:11:32.64:257,33,0	1/1:0,9:9:23.97:197,24,0	1/1:0,13:13:32.95:269,33,0	1/1:7,10:18:7.12:203,7,0	1/1:9,28:37:13.86:527,14,0	0/1:3,15:18:16.02:297,0,16	1/1:0,8:9:26.01:203,26,0
chr10	96717372	.	T	TA	1904.09	PASS	AB=0.912;AC=15;AF=0.268;AN=56;BaseQRankSum=-5.483;DP=506;FS=5.385;HRun=11;HaplotypeScore=59.3314;InbreedingCoeff=0.7084;MQ=67.72;MQ0=10;MQRankSum=0.053;QD=8.94;ReadPosRankSum=-0.521;VQSLOD=2.1522;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:26:46.91:461,47,0	1/1:3,2:5:3.01:30,3,0	0/1:44,0:15:3:3,0,60	0/1:46,0:18:10.35:10,0,61	1/1:7,18:26:53.90:520,54,0	0/0:18,0:18:40.99:0,41,308	0/0:11,0:11:20.86:0,21,157	0/0:21,0:24:42.63:0,43,302	0/0:19,0:19:23.95:0,24,318	0/0:17,0:17:38.84:0,39,302	0/0:17,0:17:47.80:0,48,369	0/0:12,0:12:26.86:0,27,209	0/0:13,0:14:31.91:0,32,238	0/0:10,0:10:20.89:0,21,160	1/1:1,11:12:24.03:236,24,0	1/1:4,18:22:27.86:463,28,0	0/0:5,0:24:32.58:0,33,94	0/0:3,0:18:26.47:0,26,77	0/0:20,0:21:36.22:0,36,266	0/0:18,0:18:53.72:0,54,408	0/0:7,0:7:17.44:0,17,125	0/0:2,0:2:5.98:0,6,46	0/0:12,0:12:26.87:0,27,209	0/0:17,0:17:44.80:0,45,347	0/1:9,5:14:2.30:138,0,2	1/1:7,9:16:3.82:220,4,0	0/0:26,0:26:68.71:0,69,532	0/0:4,0:4:11.95:0,12,93
chr10	96717478	.	TACACACAC	T	4953.06	PASS	AB=0.615;AC=25;AF=0.446;AN=56;BaseQRankSum=2.759;DP=459;FS=1.826;HRun=0;HaplotypeScore=126.6840;InbreedingCoeff=0.8062;MQ=63.07;MQ0=12;MQRankSum=-9.218;QD=29.31;ReadPosRankSum=-0.353;VQSLOD=4.7058;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:18:21.54:373,22,0	0/0:9,0:10:6:0,6,65	0/0:15,0:8:3.01:0,3,117	0/0:25,0:18:5.97:0,6,62	0/1:3,0:8:6.86:7,0,41	1/1:5,9:13:18.06:416,18,0	1/1:12,3:16:19.88:371,20,0	0/0:31,0:30:31.92:0,32,908	1/1:8,7:15:24.08:600,24,0	1/1:7,8:16:13.56:435,14,0	1/1:3,10:14:30.57:514,31,0	1/1:9,5:15:18.06:439,18,0	1/1:2,9:11:27.09:675,27,0	1/1:6,6:12:18.06:448,18,0	0/0:14,0:20:6.04:0,6,264	1/1:9,0:14:14.98:222,15,0	0/0:35,0:35:51.17:0,51,1540	0/0:19,0:19:39.11:0,39,1212	0/0:12,0:14:21.03:0,21,577	0/0:5,0:12:15.05:0,15,562	0/0:16,0:35:28.87:0,29,743	1/1:1,4:5:2.84:76,3,0	1/1:3,6:9:15.05:378,15,0	0/0:12,8:20:3.01:0,3,36	0/0:6,0:13:23.72:0,24,207	0/0:5,0:9:14.98:0,15,163	0/0:19,0:18:27.09:0,27,784	0/0:10,0:10:24.01:0,24,865
chr10	96717515	.	A	ACG	1113.47	PASS	AB=0.954;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.028;DP=548;FS=2.903;HRun=0;HaplotypeScore=104.4638;InbreedingCoeff=0.2625;MQ=57.18;MQ0=14;MQRankSum=2.528;QD=8.70;ReadPosRankSum=1.367;VQSLOD=3.3822;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:44.83:0,45,354	0/0:4,0:4:11.99:0,12,99	0/0:33,0:13:22.10:0,22,223	0/1:32,0:13:6.60:7,0,196	0/0:13,0:13:23.95:0,24,201	0/0:19,0:17:35.94:0,36,293	0/0:22,0:22:44.94:0,45,373	0/0:39,0:38:96.03:0,96,890	0/0:12,0:12:35.84:0,36,283	0/0:14,0:14:32.93:0,33,271	0/0:24,0:24:38.82:0,39,304	0/0:14,0:14:35.92:0,36,291	0/0:18,0:18:5.30:0,5,260	0/0:11,0:11:29.86:0,30,232	0/0:15,0:15:37.53:0,38,319	0/0:18,0:18:41.88:0,42,337	1/1:2,32:35:35.34:738,35,0	0/1:14,6:20:4.46:443,0,4	0/1:16,0:14:5.07:5,0,238	0/1:11,0:11:42.31:42,0,93	0/0:50,0:49:23.52:0,24,554	0/0:7,0:7:5.99:0,6,50	0/0:16,0:16:32.93:0,33,268	0/0:20,0:20:8.63:0,9,72	0/0:17,0:17:38.87:0,39,327	0/0:16,0:16:48.02:0,48,429	0/1:14,0:12:2.20:2,0,116	0/0:15,0:15:44.89:0,45,443
chr10	96718016	.	ACTC	A	1516.99	PASS	AB=0.556;AC=3;AF=0.054;AN=56;BaseQRankSum=2.264;DP=644;FS=0.000;HRun=0;HaplotypeScore=134.4191;InbreedingCoeff=0.6339;MQ=85.11;MQ0=1;MQRankSum=-4.493;QD=29.17;ReadPosRankSum=2.252;VQSLOD=3.8694;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,29:37:75.19:1175,75,0	0/0:16,0:16:39.12:0,39,802	0/0:30,0:29:79.98:0,80,1426	0/0:28,0:29:40.02:0,40,1050	0/0:17,0:17:51.16:0,51,1068	0/0:15,0:15:45.12:0,45,909	0/0:34,0:34:96.28:0,96,2041	0/0:29,0:29:78.17:0,78,1407	0/0:23,0:23:69.24:0,69,1479	0/0:17,0:17:51.15:0,51,1069	0/0:20,0:20:57.18:0,57,1200	0/0:23,0:23:57.18:0,57,1192	0/0:20,0:20:57.20:0,57,1257	0/0:27,0:27:78.27:0,78,1701	0/0:31,0:31:93.26:0,93,1946	0/1:3,12:15:33.13:449,0,33	0/0:28,0:28:72.15:0,72,1455	0/0:24,0:24:66.12:0,66,1401	0/0:18,0:18:51.18:0,51,1125	0/0:15,0:15:39.13:0,39,859	0/0:46,0:46:99:0,132,2748	0/0:13,0:13:36.11:0,36,752	0/0:13,0:13:39.10:0,39,776	0/0:24,0:24:69.22:0,69,1462	0/0:18,0:18:48.16:0,48,1018	0/0:29,0:29:84.24:0,84,1760	0/0:26,0:26:78.27:0,78,1720	0/0:7,0:7:12.04:0,12,265
chr10	96718388	.	C	CT	4978.97	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-14.032;DP=542;FS=23.575;HRun=9;HaplotypeScore=66.7504;InbreedingCoeff=0.9733;MQ=80.24;MQ0=0;MQRankSum=-2.065;QD=24.29;ReadPosRankSum=1.425;VQSLOD=3.5723;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:77.96:0,78,677	0/0:9,0:9:23.99:0,24,208	0/0:24,0:23:30.25:0,30,289	0/0:11,0:12:29.02:0,29,238	0/0:18,0:18:41.97:0,42,364	1/1:4,22:26:63.17:697,63,0	1/1:2,10:12:33.07:355,33,0	0/0:6,0:33:53.43:0,53,157	1/1:4,15:19:17.20:316,17,0	1/1:5,16:21:51.14:561,51,0	1/1:3,17:20:19.11:425,19,0	1/1:3,15:18:41.05:485,41,0	1/1:3,15:18:16.06:405,16,0	1/1:2,11:13:21.06:232,21,0	0/0:14,0:14:26.97:0,27,234	0/0:12,0:12:32.99:0,33,287	0/0:4,0:18:18.32:0,18,54	0/0:3,0:22:36.66:0,37,107	0/0:5,0:22:33.22:0,33,99	0/0:3,0:20:28.29:0,28,83	0/0:2,0:20:34.63:0,35,102	1/1:1,19:21:53.97:573,54,0	1/1:2,17:19:45.12:498,45,0	1/1:0,18:18:39.10:431,39,0	0/0:28,0:28:77.98:0,78,677	0/0:24,0:24:59.98:0,60,521	0/0:6,0:26:34.62:0,35,102	0/0:0,0:2:4.07:0,4,12
chr10	96718961	.	G	GA	4086	PASS	AB=0.865;AC=25;AF=0.446;AN=56;BaseQRankSum=-11.610;DP=537;FS=14.610;HRun=11;HaplotypeScore=69.4328;InbreedingCoeff=0.7042;MQ=70.80;MQ0=3;MQRankSum=-0.672;QD=13.85;ReadPosRankSum=0.088;VQSLOD=2.2330;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:33:50.69:0,51,146	0/0:8,0:9:13.97:0,14,99	0/1:21,0:12:1.43:1,0,119	0/1:12,1:10:1.35:1,0,45	0/1:24,3:27:17.68:18,0,368	1/1:4,17:22:21.22:386,21,0	0/1:5,14:19:10.40:269,0,10	0/0:5,0:28:41.61:0,42,120	1/1:3,20:24:16.56:328,17,0	1/1:6,16:24:33.55:493,34,0	1/1:2,21:23:57.06:561,57,0	1/1:2,14:16:30.06:305,30,0	1/1:2,10:12:15.03:152,15,0	1/1:3,17:20:24.80:421,25,0	0/0:12,0:12:23.82:0,24,181	0/0:3,0:16:24.44:0,24,71	0/0:26,0:26:59.72:0,60,463	0/0:23,0:24:55.79:0,56,421	0/0:6,0:19:25.09:0,25,72	0/0:4,0:21:35.55:0,36,117	0/0:2,0:15:24.43:0,24,71	1/1:2,17:20:44.89:430,45,0	1/1:7,13:20:15.84:342,16,0	1/1:2,18:20:18.85:373,19,0	0/0:10,0:10:23.86:0,24,184	0/1:11,1:12:6.55:7,0,139	0/0:6,0:19:22.40:0,22,65	0/0:0,0:10:18.33:0,18,53
chr10	96719135	.	CCA	C	4487.74	PASS	AB=0.992;AC=35;AF=0.625;AN=56;BaseQRankSum=0.731;DP=648;FS=9.052;HRun=0;HaplotypeScore=113.4836;InbreedingCoeff=0.7215;MQ=50.38;MQ0=66;MQRankSum=1.041;QD=11.14;ReadPosRankSum=-1.389;VQSLOD=3.9878;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:53:64.33:0,64,546	1/1:3,1:5:8.86:82,9,0	0/0:30,0:5:0.47:0,0,1	0/0:43,1:8:2.97:0,3,20	1/1:13,8:19:28.40:313,28,0	1/1:16,4:19:30.09:344,30,0	1/1:18,5:21:17.10:357,17,0	0/1:30,0:29:29.50:29,0,274	1/1:17,3:17:23.68:227,24,0	1/1:22,4:18:32.52:270,33,0	1/1:15,7:22:39.07:422,39,0	1/1:17,8:22:34.59:357,35,0	1/1:12,4:14:26.94:287,27,0	1/1:7,4:11:17.80:192,18,0	1/1:8,3:11:18.01:192,18,0	0/0:5,0:8:8.03:0,8,57	0/0:26,0:25:38.87:0,39,561	0/0:23,1:23:27.46:0,27,436	0/0:17,0:13:15.86:0,16,106	0/0:24,0:22:35:0,35,435	0/1:42,1:39:6.08:6,0,711	1/1:11,3:15:26.53:228,27,0	1/1:17,2:14:14.83:133,15,0	1/1:29,6:34:41.09:421,41,0	1/1:15,5:20:34.17:354,34,0	1/1:14,3:13:23.90:270,24,0	0/1:16,0:15:3.52:4,0,359	0/0:12,0:10:12.04:0,12,173
chr10	96719173	.	AT	A	8750.02	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=1.416;DP=512;FS=9.729;HRun=9;HaplotypeScore=90.3469;InbreedingCoeff=0.9657;MQ=67.75;MQ0=3;MQRankSum=-2.786;QD=21.14;ReadPosRankSum=1.429;VQSLOD=4.9850;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,117,1313	1/1:2,2:4:8.98:76,9,0	0/0:20,0:11:30.06:0,30,329	0/0:18,0:11:9.18:0,9,184	1/1:7,10:17:22.97:217,23,0	1/1:2,16:18:38.99:351,39,0	1/1:3,8:11:27.01:247,27,0	1/1:1,16:17:48.01:435,48,0	1/1:4,12:16:36.01:329,36,0	1/1:2,17:19:48.02:439,48,0	1/1:5,16:21:42:384,42,0	1/1:5,9:14:29.99:267,30,0	1/1:1,12:13:35.97:321,36,0	1/1:1,11:12:27.01:247,27,0	1/1:4,15:19:47.96:426,48,0	0/0:15,0:15:39.12:0,39,450	1/1:2,15:17:42.02:384,42,0	1/1:1,24:25:63.03:576,63,0	1/1:3,11:14:32.95:290,33,0	1/1:2,14:16:42.01:384,42,0	1/1:7,16:23:45.01:412,45,0	1/1:2,14:16:45.01:408,45,0	1/1:1,11:12:26.42:230,26,0	1/1:7,27:33:65.53:603,66,0	1/1:4,11:15:35.83:325,36,0	1/1:5,22:26:65.16:602,65,0	1/1:1,15:16:42.02:384,42,0	1/1:0,18:18:45.02:412,45,0
chr10	96720309	.	GGTGCGTGGGAAA	G	5217.90	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.671;DP=576;FS=21.623;HRun=0;HaplotypeScore=205.7374;InbreedingCoeff=0.9777;MQ=80.27;MQ0=0;MQRankSum=-8.654;QD=59.29;ReadPosRankSum=-1.389;VQSLOD=2.9089;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.24:0,75,4115	0/0:12,0:12:30.10:0,30,1842	0/0:18,0:18:51.15:0,51,2158	0/0:19,0:19:33.02:0,33,1694	0/0:26,0:26:72.25:0,72,3824	0/0:22,0:22:66.21:0,66,3547	0/0:28,0:28:75.23:0,75,3946	1/1:12,14:26:42.13:1301,42,0	0/0:21,0:21:60.21:0,60,3667	0/0:27,0:27:75.26:0,75,4204	0/0:22,0:22:60.21:0,60,3501	0/0:14,0:14:39.13:0,39,2070	0/0:28,0:28:78.25:0,78,4467	0/0:29,0:29:84.27:0,84,4854	0/0:27,0:27:78.27:0,78,4618	0/0:17,0:17:51.17:0,51,2794	0/0:29,0:29:87.30:0,87,4725	0/0:17,0:17:42.14:0,42,2160	1/1:4,9:13:27.06:840,27,0	1/1:2,10:12:27.09:1008,27,0	1/1:6,13:19:30.01:715,30,0	0/0:20,0:20:60.21:0,60,3446	0/0:20,0:20:60.19:0,60,3275	0/0:22,0:22:66.16:0,66,3568	0/0:18,0:18:51.17:0,51,3004	0/0:26,0:26:78.27:0,78,4586	1/1:2,14:16:30.57:1128,31,0	1/1:0,2:2:6.02:226,6,0
chr10	96720716	.	C	CTT	439.62	PASS	AB=1.000;AC=19;AF=0.731;AN=26;BaseQRankSum=1.083;DP=92;FS=27.389;HRun=0;HaplotypeScore=26.8920;InbreedingCoeff=0.4631;MQ=111.30;MQ0=16;MQRankSum=-2.774;QD=15.70;ReadPosRankSum=-4.726;VQSLOD=0.4316;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:27,0:21:51.07:0,51,791	0/0:26,0:21:57.18:0,57,808	1/1:0,1:1:3.01:59,3,0	./.	./.	0/1:7,0:1:0:0,0,0	./.	1/1:1,0:1:3.01:45,3,0	./.	1/1:1,0:1:2.97:20,3,0	1/1:3,0:2:3.01:49,3,0	1/1:0,3:3:6.02:80,6,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:2,0:2:6.02:101,6,0	0/1:4,0:3:0:0,0,0	0/1:1,0:1:0:0,0,0	1/1:1,3:4:9.03:158,9,0	./.	1/1:1,0:1:3:26,3,0
chr10	96720977	.	AACC	A	337.71	PASS	AB=1.000;AC=5;AF=0.096;AN=52;BaseQRankSum=5.263;DP=419;FS=1.646;HRun=0;HaplotypeScore=113.1780;InbreedingCoeff=0.7329;MQ=52.79;MQ0=21;MQRankSum=0.241;QD=6.89;ReadPosRankSum=1.456;VQSLOD=3.0089;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,4:26:24.32:284,24,0	0/0:6,0:6:15.03:0,15,148	0/0:8,0:2:2.76:0,3,13	0/1:8,0:5:0.19:0,0,17	0/0:21,0:19:41.88:0,42,398	0/0:13,0:13:38.52:0,39,366	0/0:28,0:28:62.73:0,63,677	0/0:28,0:26:69.11:0,69,1097	0/0:9,0:9:22.86:0,23,227	0/0:12,0:10:30.07:0,30,335	0/0:12,0:12:32.44:0,32,327	0/0:16,0:15:38.65:0,39,388	0/0:12,0:12:2.54:0,3,265	0/0:14,0:13:33.05:0,33,368	0/0:16,0:16:48.07:0,48,497	1/1:12,2:13:15.70:170,16,0	./.	./.	0/0:31,0:30:46.94:0,47,993	0/0:17,0:17:51.14:0,51,745	0/0:13,0:12:36.12:0,36,599	0/0:19,0:18:41.77:0,42,414	0/0:13,0:12:32.96:0,33,333	0/0:12,0:12:29.43:0,29,302	0/0:17,0:16:41.31:0,41,435	0/0:23,0:23:69.06:0,69,713	0/0:12,0:11:29.36:0,29,473	0/0:15,0:10:27.09:0,27,494
chr10	96720980	.	CA	C	2165.56	PASS	AB=0.942;AC=35;AF=0.673;AN=52;BaseQRankSum=0.118;DP=419;FS=3.766;HRun=15;HaplotypeScore=92.3701;InbreedingCoeff=0.6693;MQ=54.52;MQ0=20;MQRankSum=1.193;QD=7.37;ReadPosRankSum=2.373;VQSLOD=3.1651;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:43.66:0,44,204	1/1:1,6:7:14.59:96,15,0	0/1:10,0:2:8.08:8,0,10	0/0:8,1:6:2.13:0,2,5	1/1:8,11:18:27.05:188,27,0	1/1:4,1:13:19.22:66,19,0	1/1:8,0:25:34.58:100,35,0	0/0:28,0:26:38.68:0,39,186	1/1:3,5:9:4.03:86,4,0	1/1:6,5:11:16.73:99,17,0	1/1:5,7:12:20.67:134,21,0	1/1:4,13:16:29.51:192,30,0	1/1:5,6:12:19.24:120,19,0	1/1:5,7:12:8.59:60,9,0	1/1:4,12:16:38.39:249,38,0	0/0:14,0:13:14.06:0,14,69	./.	./.	0/1:26,3:29:15.74:16,0,155	0/1:16,1:17:9.39:9,0,65	0/0:12,2:13:6.54:0,7,94	1/1:6,10:16:28.35:178,28,0	1/1:4,6:12:12.88:119,13,0	1/1:5,6:12:19.75:121,20,0	1/1:6,10:16:28.59:178,29,0	1/1:3,18:22:51.85:332,52,0	0/0:13,0:12:24.08:0,24,130	0/0:15,0:10:23.05:0,23,122
chr10	96720984	.	A	AG	289.18	PASS	AB=1.000;AC=5;AF=0.096;AN=52;BaseQRankSum=7.174;DP=412;FS=0.775;HRun=0;HaplotypeScore=101.7937;InbreedingCoeff=0.7727;MQ=56.60;MQ0=17;MQRankSum=2.063;QD=5.26;ReadPosRankSum=1.484;VQSLOD=2.9545;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,1:30:23.99:223,24,0	0/0:7,0:7:17.97:0,18,153	0/1:12,0:3:5.44:5,0,10	0/0:11,0:7:4.08:0,4,35	0/0:18,0:16:41.91:0,42,360	0/0:14,0:14:41.83:0,42,325	0/0:25,0:25:68.65:0,69,527	0/0:26,0:25:68.97:0,69,765	0/0:9,0:9:23.96:0,24,201	0/0:16,0:15:35.88:0,36,292	0/0:10,0:10:29.84:0,30,241	0/0:17,0:16:37.67:0,38,325	0/0:11,0:11:29.16:0,29,231	0/0:13,0:12:26.88:0,27,226	0/0:17,0:17:50.81:0,51,417	1/1:4,8:11:16.28:181,16,0	./.	./.	0/0:24,0:24:68.23:0,68,687	0/0:13,0:13:35.93:0,36,372	0/0:14,0:14:32.69:0,33,398	0/0:16,0:15:44.82:0,45,359	0/0:13,0:12:32.96:0,33,292	0/0:10,0:10:26.90:0,27,218	0/0:17,0:16:44.86:0,45,368	0/0:24,0:24:66.41:0,66,566	0/0:14,0:13:37.77:0,38,398	0/0:15,0:10:27.02:0,27,332
chr10	96721019	.	G	GTTA	1065.45	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.400;DP=393;FS=13.162;HRun=0;HaplotypeScore=98.3462;InbreedingCoeff=0.9589;MQ=88.43;MQ0=0;MQRankSum=-5.112;QD=34.37;ReadPosRankSum=2.564;VQSLOD=3.9875;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.22:0,69,1104	0/0:5,0:5:12.04:0,12,204	0/0:18,0:17:44.98:0,45,622	0/0:18,0:17:32.24:0,32,533	0/0:13,0:13:29.99:0,30,475	0/0:14,0:14:42.13:0,42,678	0/0:18,0:18:54.08:0,54,836	0/0:14,0:14:39.12:0,39,609	0/0:11,0:11:32.99:0,33,461	0/0:18,0:18:54.18:0,54,895	0/0:5,0:5:12.04:0,12,204	0/0:17,0:17:39.12:0,39,637	0/0:17,0:17:48.12:0,48,730	0/0:15,0:15:36.11:0,36,581	0/0:16,0:16:45.14:0,45,718	0/0:9,0:9:18.06:0,18,306	1/1:0,17:18:33.03:704,33,0	1/1:1,11:13:21.07:482,21,0	0/0:15,0:15:39.12:0,39,634	0/0:9,0:9:24.08:0,24,405	0/0:12,0:12:33.11:0,33,557	0/0:13,0:13:39.13:0,39,641	0/0:11,0:11:30.10:0,30,510	0/0:11,0:11:27.09:0,27,459	0/0:9,0:9:27.08:0,27,419	0/0:22,0:22:60.20:0,60,983	0/0:18,0:18:54.15:0,54,837	0/0:8,0:8:24.07:0,24,379
chr10	96721792	.	GC	G	1307.22	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.654;DP=660;FS=0.000;HRun=5;HaplotypeScore=86.0169;InbreedingCoeff=0.9988;MQ=83.00;MQ0=0;MQRankSum=-3.484;QD=26.68;ReadPosRankSum=0.699;VQSLOD=3.2407;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,29:32:81.23:918,81,0	0/0:10,0:10:27.06:0,27,350	0/0:14,0:14:39.12:0,39,518	0/0:23,0:23:63.17:0,63,825	0/0:17,0:17:51.17:0,51,694	0/0:16,0:16:45.15:0,45,615	0/0:28,0:28:84.28:0,84,1149	0/0:16,0:16:45.14:0,45,599	0/0:17,0:17:51.17:0,51,696	0/0:19,0:19:51.15:0,51,670	0/0:13,0:13:30.10:0,30,407	0/0:33,0:33:99:0,99,1317	0/0:27,0:27:75.25:0,75,1020	0/0:25,0:25:72.24:0,72,983	0/0:27,0:27:75.25:0,75,1025	1/1:1,16:17:45.13:510,45,0	0/0:31,0:31:93.27:0,93,1237	0/0:28,0:28:78.25:0,78,1051	0/0:16,0:16:45.12:0,45,595	0/0:21,0:21:54.12:0,54,660	0/0:80,0:80:99:0,226,3056	0/0:18,0:18:42.14:0,42,573	0/0:18,0:18:48.10:0,48,591	0/0:38,0:38:99:0,111,1516	0/0:19,0:19:48.14:0,48,625	0/0:20,0:20:54.16:0,54,709	0/0:25,0:25:72.22:0,72,954	0/0:12,0:12:30.08:0,30,386
chr10	96722845	.	TTGTGTG	T	1470.89	PASS	AB=0.856;AC=41;AF=0.788;AN=52;BaseQRankSum=1.701;DP=512;FS=17.537;HRun=0;HaplotypeScore=133.4044;InbreedingCoeff=0.2900;MQ=67.18;MQ0=6;MQRankSum=-2.260;QD=3.83;ReadPosRankSum=0.977;VQSLOD=1.6283;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:6.01:0,6,107	./.	./.	0/0:24,0:19:3.01:0,3,38	1/1:16,2:20:1.36:3,1,0	1/1:11,6:17:3.01:61,3,0	1/1:14,3:17:2.97:20,3,0	1/1:26,0:26:5.10:28,5,0	1/1:13,0:14:3.01:49,3,0	1/1:11,0:12:3.01:42,3,0	1/1:11,1:13:3.90:63,4,0	1/1:4,1:6:6.02:90,6,0	1/1:7,0:9:3.64:43,4,0	1/1:10,2:14:12.04:206,12,0	1/1:11,1:21:8.14:60,8,0	0/0:24,0:23:23.60:0,24,458	0/0:18,0:30:46.85:0,47,1082	0/1:17,0:27:36.46:36,0,645	1/1:14,0:16:6.02:84,6,0	1/1:13,0:22:15.05:203,15,0	1/1:26,0:33:2.73:41,3,0	1/1:13,8:21:6.02:120,6,0	1/1:8,6:14:6.02:122,6,0	1/1:11,6:18:2.80:42,3,0	0/1:11,2:15:12.24:58,0,12	0/1:15,1:20:2.53:106,0,3	1/1:11,0:16:8.62:95,9,0	1/1:9,0:7:8.54:44,9,0
chr10	96722998	.	ATCTG	A	5519.53	PASS	AB=1.000;AC=33;AF=0.611;AN=54;BaseQRankSum=-10.527;DP=585;FS=0.000;HRun=0;HaplotypeScore=188.7357;InbreedingCoeff=0.1170;MQ=46.93;MQ0=3;MQRankSum=5.359;QD=11.40;ReadPosRankSum=1.237;VQSLOD=4.4044;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:21.99:222,22,0	1/1:6,0:6:9.55:140,10,0	0/0:19,0:9:23.86:0,24,336	0/0:19,0:10:24.08:0,24,479	1/1:25,2:27:27.25:441,27,0	0/1:16,0:16:24.51:38,0,25	0/1:14,0:14:16.10:16,0,34	1/1:4,37:39:99:1026,108,0	0/1:24,0:24:32.16:32,0,145	0/1:25,0:25:49.31:49,0,371	0/1:28,0:28:19.16:19,0,184	0/0:14,0:13:6.01:0,6,69	0/1:19,0:19:19.14:19,0,191	0/0:14,0:14:3.80:0,4,103	1/1:24,0:24:31.49:410,31,0	0/1:16,0:16:4.98:85,0,5	1/1:25,0:25:13.61:360,14,0	0/1:21,0:21:2.76:80,0,3	0/1:16,0:15:51.45:231,0,51	1/1:27,0:27:13.03:314,13,0	1/1:16,0:15:12.62:162,13,0	1/1:11,0:10:3:25,3,0	0/0:22,0:21:8.23:0,8,68	./.	1/1:31,1:30:31.83:687,32,0	1/1:26,3:29:42.84:775,43,0	0/1:22,0:21:94.61:157,0,95	0/1:16,0:16:0.49:230,0,0
chr10	96723010	.	A	ATCTG	829.50	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-0.451;DP=591;FS=3.730;HRun=0;HaplotypeScore=219.9461;InbreedingCoeff=-0.0259;MQ=46.00;MQ0=5;MQRankSum=1.735;QD=2.42;ReadPosRankSum=-3.145;VQSLOD=2.0700;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:18.59:19,0,171	1/1:5,0:5:1.52:26,2,0	0/0:13,0:6:11.97:0,12,181	0/0:15,0:8:24.03:0,24,377	0/0:26,0:26:21.42:0,21,261	0/0:14,0:14:11.30:0,11,111	0/0:14,0:14:5.89:0,6,65	0/1:46,0:43:34.84:35,0,374	0/1:23,0:23:8.49:8,0,213	0/0:24,0:24:22.90:0,23,407	0/1:29,0:29:15.50:16,0,197	0/0:12,0:11:8.99:0,9,76	0/0:19,0:19:8.91:0,9,185	0/1:17,0:17:10.56:11,0,114	0/1:21,0:21:34.58:35,0,135	0/1:19,0:19:27.64:28,0,41	1/1:30,0:29:34.58:630,35,0	1/1:3,20:24:3.95:77,4,0	0/1:16,0:14:32.48:32,0,86	0/0:30,0:30:7.29:0,7,269	0/0:16,0:15:27.41:0,27,219	1/1:12,0:11:0.36:1,0,0	0/1:23,0:22:7.22:7,0,152	0/0:14,0:14:2.76:0,3,24	0/1:31,0:30:2.99:3,0,403	0/0:31,0:31:70.33:0,70,786	0/0:20,0:19:10.71:0,11,146	0/1:14,0:14:54.74:58,0,55
chr10	96723014	.	ATCTG	A	631.76	PASS	AB=0.881;AC=20;AF=0.370;AN=54;BaseQRankSum=-1.059;DP=588;FS=17.011;HRun=0;HaplotypeScore=217.0578;InbreedingCoeff=-0.1794;MQ=45.46;MQ0=5;MQRankSum=-0.742;QD=1.84;ReadPosRankSum=-0.802;VQSLOD=0.9103;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:34:68.18:68,0,231	1/1:2,0:4:1.53:29,2,0	0/0:10,0:4:2.17:0,2,47	0/0:15,0:8:11.71:0,12,85	0/1:24,1:27:14.57:15,0,38	0/1:12,1:13:16.18:16,0,34	0/0:14,0:14:5.88:0,6,43	0/0:45,0:42:39.10:0,39,613	0/1:11,11:22:23.55:24,0,147	0/0:24,0:25:30.67:0,31,513	0/0:28,0:28:27.56:0,28,239	0/0:10,2:11:5.99:0,6,50	0/0:18,0:18:25.27:0,25,239	0/1:9,8:17:34.85:35,0,77	1/1:12,0:21:0.31:55,0,0	0/1:11,0:19:36.11:36,0,134	0/1:30,0:29:47.75:48,0,351	0/1:23,0:23:9.52:10,0,65	0/1:17,0:15:21.61:22,0,261	0/1:26,1:29:99:153,0,259	0/0:16,0:15:2.87:0,3,202	1/1:8,3:10:3:25,3,0	0/1:22,3:24:51.10:85,0,51	./.	1/1:24,4:30:1.94:51,2,0	0/0:32,0:32:38.30:0,38,639	0/1:20,1:20:99:113,0,223	0/0:14,0:14:15.35:0,15,157
chr10	96723018	.	G	GTCTA	752.79	PASS	AB=0.972;AC=22;AF=0.407;AN=54;BaseQRankSum=2.162;DP=572;FS=14.995;HRun=0;HaplotypeScore=215.0467;InbreedingCoeff=-0.0871;MQ=44.88;MQ0=5;MQRankSum=-3.087;QD=2.18;ReadPosRankSum=-1.600;VQSLOD=1.4422;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:94.88:95,0,229	1/1:4,0:4:1.53:46,2,0	0/0:9,0:3:2.18:0,2,72	0/0:12,0:6:12.04:0,12,192	0/0:14,15:29:14.36:0,14,112	1/1:12,0:12:0.64:21,1,0	0/0:14,0:14:3.42:0,3,25	0/0:44,0:41:9.19:0,9,453	0/1:22,0:22:38:42,0,38	0/1:24,0:24:7.36:7,0,181	0/0:29,0:29:16.48:0,16,111	0/0:11,0:10:0.47:0,0,1	0/0:17,0:17:16.12:0,16,139	1/1:16,0:16:2.93:49,3,0	0/1:17,3:20:39.31:79,0,39	0/1:19,0:19:35.93:36,0,90	1/1:29,0:28:26.07:264,26,0	0/1:23,0:23:34.50:46,0,35	0/1:15,0:14:1:1,0,132	0/1:29,0:29:64.89:65,0,314	0/0:16,0:15:27.03:0,27,255	1/1:11,0:10:2.89:25,3,0	0/1:24,0:23:30.57:49,0,31	./.	0/1:22,8:29:13.83:14,0,171	0/0:32,0:32:20.64:0,21,414	0/1:22,0:21:59.10:59,0,181	0/1:12,0:12:8.61:9,0,98
chr10	96723051	.	T	TCTATCTAT	3772.29	PASS	AB=1.000;AC=41;AF=0.820;AN=50;BaseQRankSum=-2.308;DP=538;FS=4.639;HRun=0;HaplotypeScore=199.3052;InbreedingCoeff=-0.0359;MQ=49.03;MQ0=1;MQRankSum=-1.979;QD=7.67;ReadPosRankSum=-0.084;VQSLOD=2.5854;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:15:310,15,0	1/1:4,0:4:3.01:84,3,0	./.	./.	0/1:30,0:30:13.67:19,0,14	1/1:12,0:12:3.01:50,3,0	1/1:11,0:11:0.47:1,0,0	1/1:33,0:33:27.09:188,27,0	1/1:17,0:17:3.01:69,3,0	0/1:21,0:21:6.69:197,0,7	1/1:26,0:26:9.70:119,10,0	0/1:14,0:13:0:0,0,0	0/1:17,0:17:26.12:60,0,26	1/1:16,0:16:3.01:50,3,0	1/1:23,0:23:8.98:189,9,0	1/1:19,0:19:11.98:229,12,0	0/1:32,0:31:58.55:262,0,59	0/1:21,0:21:51.95:63,0,52	1/1:19,0:19:16.29:297,16,0	1/1:25,0:25:18.06:437,18,0	0/0:15,0:14:2.94:0,3,18	1/1:19,0:18:3.01:50,3,0	1/1:18,0:17:9.03:176,9,0	./.	1/1:25,0:24:3.90:87,4,0	0/1:26,0:26:88.01:88,0,100	1/1:24,0:23:33.10:628,33,0	1/1:3,5:9:3.01:118,3,0
chr10	96723445	.	C	CTAATAATAATAA	8597.52	PASS	AB=0.714;AC=35;AF=0.761;AN=46;BaseQRankSum=-4.023;DP=222;FS=2.968;HRun=0;HaplotypeScore=71.4268;InbreedingCoeff=0.4858;MQ=81.80;MQ0=0;MQRankSum=-4.235;QD=49.41;ReadPosRankSum=-3.159;VQSLOD=3.9831;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,3:8:12.04:562,12,0	./.	./.	0/0:8,0:8:3.01:0,3,87	0/1:6,0:10:27.89:28,0,38	1/1:3,3:7:12.04:615,12,0	./.	1/1:30,0:30:30.10:1113,30,0	1/1:5,0:6:6.02:191,6,0	1/1:4,2:6:6.02:351,6,0	1/1:9,0:9:6.02:89,6,0	1/1:5,5:10:12.04:701,12,0	./.	1/1:7,0:7:3.01:175,3,0	0/0:4,0:6:5.74:0,6,36	1/1:4,0:5:3.01:97,3,0	1/1:7,4:15:18.95:843,19,0	1/1:15,1:18:21.07:932,21,0	1/1:8,0:8:12.04:335,12,0	./.	1/1:5,0:5:9.03:290,9,0	1/1:5,1:6:6.02:351,6,0	0/0:4,0:4:0:0,0,0	1/1:2,0:2:3.01:157,3,0	0/0:3,0:5:5.98:0,6,47	0/0:3,0:6:8.97:0,9,70	1/1:6,3:9:15.05:864,15,0	1/1:7,3:12:21.07:903,21,0
chr10	96723554	.	T	TG	816.51	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.550;DP=378;FS=0.929;HRun=3;HaplotypeScore=39.8625;InbreedingCoeff=0.9552;MQ=93.04;MQ0=0;MQRankSum=1.036;QD=26.34;ReadPosRankSum=1.384;VQSLOD=2.8432;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:20:44.98:602,45,0	0/0:6,0:6:18.06:0,18,216	0/0:18,0:18:50.90:0,51,558	0/0:20,0:19:51.02:0,51,559	0/0:10,0:10:30.09:0,30,357	0/0:15,0:15:42.13:0,42,503	0/0:13,0:13:39.12:0,39,466	0/0:21,0:21:54.16:0,54,648	0/0:6,0:6:18.06:0,18,216	0/0:7,0:7:21.06:0,21,252	0/0:5,0:5:9.03:0,9,108	0/0:12,0:12:30.07:0,30,347	0/0:14,0:14:39.12:0,39,468	0/0:13,0:13:39.12:0,39,467	0/0:13,0:13:39.12:0,39,468	1/1:0,10:10:24.08:336,24,0	0/0:30,0:30:81.23:0,81,958	0/0:17,0:17:45.14:0,45,539	0/0:13,0:13:30.56:0,31,360	0/0:9,0:9:24.07:0,24,287	0/0:19,0:19:51.16:0,51,610	0/0:12,0:12:27.08:0,27,319	0/0:9,0:9:27.08:0,27,321	0/0:10,0:10:27.08:0,27,321	0/0:12,0:12:24.07:0,24,287	0/0:19,0:19:42.12:0,42,494	0/0:9,0:9:27.08:0,27,324	0/0:15,0:15:45.14:0,45,540
chr10	96724855	.	A	ATCTGTCTG	13138.16	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=0.555;DP=766;FS=0.869;HRun=0;HaplotypeScore=174.0246;InbreedingCoeff=0.8677;MQ=66.47;MQ0=2;MQRankSum=-6.541;QD=22.97;ReadPosRankSum=-0.729;VQSLOD=4.2684;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:41:50.94:419,51,0	0/0:5,0:5:15.05:0,15,354	0/0:33,0:28:42.12:0,42,758	0/0:21,0:19:13.17:0,13,230	0/0:26,0:26:57.19:0,57,1351	1/1:8,10:20:24.08:996,24,0	1/1:14,13:32:12.04:445,12,0	1/1:21,0:33:35.77:358,36,0	1/1:9,11:27:24.08:985,24,0	1/1:11,16:32:48.15:1620,48,0	1/1:5,6:12:8.95:266,9,0	1/1:14,18:33:36.12:1478,36,0	1/1:7,22:34:30.10:1240,30,0	1/1:12,22:41:54.19:2199,54,0	0/0:27,0:26:66.21:0,66,1617	1/1:11,0:30:26.97:223,27,0	0/0:38,0:39:81.24:0,81,1883	0/0:30,0:31:63.21:0,63,1440	1/1:12,0:24:38.99:370,39,0	1/1:6,0:19:31.78:230,32,0	1/1:17,0:51:56.92:465,57,0	1/1:6,7:18:15.05:567,15,0	1/1:6,7:17:6.02:249,6,0	1/1:19,13:40:12.04:497,12,0	0/0:12,0:12:21.07:0,21,494	0/1:20,0:20:31.69:32,0,955	1/1:16,0:39:44.82:375,45,0	1/1:2,0:8:14.98:123,15,0
chr10	96726030	.	ATG	A	19629.47	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.571;DP=758;FS=2.282;HRun=0;HaplotypeScore=113.3607;InbreedingCoeff=0.9746;MQ=66.63;MQ0=1;MQRankSum=-5.630;QD=27.69;ReadPosRankSum=6.765;VQSLOD=5.7888;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,49:56:99:1707,141,0	1/1:0,6:6:12.04:147,12,0	0/0:29,0:23:25.58:0,26,725	0/0:20,0:17:45.14:0,45,646	1/1:4,24:28:72.19:864,72,0	1/1:1,14:15:36.11:440,36,0	1/1:8,20:28:66.19:795,66,0	1/1:11,19:31:15.95:619,16,0	1/1:2,17:19:48.15:587,48,0	1/1:4,21:25:60.19:733,60,0	1/1:4,11:15:33.10:403,33,0	1/1:7,28:35:72.23:880,72,0	1/1:5,21:26:63.20:770,63,0	1/1:4,15:20:41.96:491,42,0	1/1:1,26:27:66.21:807,66,0	1/1:5,26:31:75.24:917,75,0	1/1:6,39:45:99:1283,105,0	1/1:11,38:49:99:1304,108,0	1/1:8,15:24:47.85:542,48,0	1/1:6,15:21:45.14:550,45,0	1/1:10,36:47:99:1187,99,0	1/1:4,31:35:81.25:987,81,0	1/1:3,13:17:39.12:477,39,0	1/1:7,38:45:99:1283,105,0	1/1:1,15:16:42.13:513,42,0	1/1:4,21:25:60.17:719,60,0	1/1:1,13:14:30.09:367,30,0	1/1:1,8:9:21.07:257,21,0
chr10	96726754	.	G	GA	2491.39	PASS	AB=0.792;AC=20;AF=0.357;AN=56;BaseQRankSum=-10.093;DP=441;FS=9.772;HRun=13;HaplotypeScore=59.0625;InbreedingCoeff=0.6019;MQ=64.82;MQ0=10;MQRankSum=0.299;QD=10.51;ReadPosRankSum=-1.457;VQSLOD=1.8191;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,21:31:31.52:400,32,0	0/0:0,0:8:16.30:0,16,48	0/0:25,0:7:3.03:0,3,57	0/1:22,0:10:13.24:36,0,13	0/1:0,0:13:4.35:4,0,30	0/0:4,0:12:16.28:0,16,47	0/0:5,0:12:14.01:0,14,40	1/1:7,17:26:31.09:395,31,0	0/0:0,0:6:12.22:0,12,35	0/0:4,0:25:42.15:0,42,124	0/0:4,0:10:10.98:0,11,49	0/0:1,0:7:12.22:0,12,35	0/0:5,0:11:8.11:0,8,23	0/0:4,0:13:12.20:0,12,36	0/0:2,0:13:11.54:0,12,37	1/1:1,12:13:24.03:223,24,0	0/1:10,29:40:10.06:472,0,10	1/1:9,12:22:12.13:231,12,0	1/1:7,9:14:27.01:244,27,0	1/1:0,7:7:21.02:195,21,0	1/1:3,3:6:6.01:56,6,0	0/0:1,0:4:2.02:0,2,6	0/0:0,0:6:10.18:0,10,29	0/0:5,0:15:24.08:0,24,87	0/0:1,0:12:21.92:0,22,64	0/0:8,0:20:23.35:0,23,72	0/1:6,15:22:8.99:227,0,9	1/1:8,11:19:6.45:202,6,0
chr10	96727351	.	C	CAATAATAATAATAAT	10600.65	PASS	AB=0.944;AC=47;AF=0.839;AN=56;BaseQRankSum=-0.868;DP=363;FS=11.618;HRun=0;HaplotypeScore=137.0543;InbreedingCoeff=0.5316;MQ=58.25;MQ0=1;MQRankSum=-8.072;QD=37.33;ReadPosRankSum=-5.997;VQSLOD=0.6624;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:69.22:0,69,2312	1/1:3,0:4:6.02:292,6,0	0/0:10,0:9:3.01:0,3,71	0/0:11,0:9:8.86:0,9,160	1/1:12,0:11:13.60:432,14,0	1/1:3,9:13:12.04:820,12,0	1/1:8,0:8:9.03:306,9,0	1/1:39,0:32:48.11:1123,48,0	1/1:6,3:9:6.02:369,6,0	1/1:11,0:11:18.06:688,18,0	1/1:4,5:9:6.02:236,6,0	1/1:11,0:11:21.07:766,21,0	1/1:5,0:5:5.99:107,6,0	1/1:5,3:8:6.02:400,6,0	1/1:6,0:9:12.04:518,12,0	0/0:17,0:17:33.10:0,33,1042	1/1:19,0:19:3.59:74,4,0	0/1:16,0:17:82.61:83,0,183	1/1:16,0:16:18.06:705,18,0	1/1:11,0:11:21.07:665,21,0	1/1:15,0:15:12.04:252,12,0	1/1:5,0:5:3.01:85,3,0	1/1:8,0:8:6.02:136,6,0	1/1:3,0:3:3.01:85,3,0	1/1:5,0:15:9.03:456,9,0	1/1:14,0:13:17.99:419,18,0	1/1:5,0:5:9.03:390,9,0	1/1:16,0:18:33.04:1194,33,0
chr10	96727404	.	G	GTAA	1758.10	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=-1.683;DP=360;FS=11.291;HRun=0;HaplotypeScore=78.2937;InbreedingCoeff=0.7486;MQ=61.13;MQ0=5;MQRankSum=-0.911;QD=9.61;ReadPosRankSum=-1.436;VQSLOD=1.5530;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:51.11:0,51,537	1/1:3,0:3:2.40:16,2,0	0/0:13,0:8:21.03:0,21,213	0/0:16,0:8:6.99:0,7,96	1/1:9,0:8:12:105,12,0	0/0:14,0:14:20.60:0,21,262	0/0:6,0:6:17.95:0,18,146	1/1:34,0:30:78.34:709,78,0	0/0:10,0:10:21.01:0,21,219	0/0:12,0:12:27.05:0,27,278	0/0:7,0:7:17.98:0,18,212	0/0:15,0:15:23.98:0,24,236	0/0:9,0:9:24.01:0,24,249	0/0:6,0:6:9.55:0,10,94	1/1:9,0:9:10.55:85,11,0	0/0:20,0:20:23.94:0,24,201	0/1:23,0:23:69.04:69,0,98	1/1:3,18:23:9.03:164,9,0	1/1:11,0:11:24.43:231,24,0	1/1:10,0:10:8.95:79,9,0	1/1:8,0:8:17.43:132,17,0	0/0:5,0:5:15:0,15,142	0/0:6,0:6:15:0,15,157	0/0:5,0:5:12:0,12,116	1/1:18,0:18:18.45:162,18,0	0/1:10,0:10:32.60:70,0,33	1/1:7,0:7:12.86:94,13,0	1/1:18,0:18:7.14:53,7,0
chr10	96727548	.	CCACACACACACGCA	C	3437.02	PASS	AB=1.000;AC=34;AF=0.654;AN=52;BaseQRankSum=-4.259;DP=416;FS=17.310;HRun=0;HaplotypeScore=138.6067;InbreedingCoeff=-0.3074;MQ=65.31;MQ0=14;MQRankSum=0.106;QD=9.14;ReadPosRankSum=-3.286;VQSLOD=0.2107;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:3.01:0,3,130	1/1:1,0:1:3:25,3,0	0/1:34,0:17:92.11:92,0,99	0/1:41,0:16:99:162,0,191	./.	0/1:19,0:19:35.76:36,0,1376	0/1:15,0:14:99:138,0,796	1/1:8,23:31:68.85:664,69,0	0/1:10,0:10:50.81:51,0,720	0/1:9,0:7:45.78:46,0,197	0/0:4,0:4:6.02:0,6,262	0/1:17,0:17:35.76:36,0,1172	0/1:10,0:10:97.28:97,0,570	0/1:11,0:10:42.84:43,0,663	0/1:16,0:16:86.70:87,0,854	0/1:14,0:14:19.85:20,0,781	1/1:13,3:16:20.96:266,21,0	1/1:3,14:19:9:245,9,0	1/1:3,13:16:27.36:410,27,0	1/1:0,2:2:3.01:122,3,0	1/1:5,20:25:6.02:173,6,0	./.	1/1:6,0:6:14.93:116,15,0	0/1:29,0:29:36.66:37,0,2266	0/1:5,0:5:37.89:38,0,251	0/1:12,0:10:63.79:64,0,683	1/1:9,0:9:21.42:217,21,0	1/1:5,0:7:12.01:254,12,0
chr10	96727943	.	GA	G	1304.59	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.493;DP=508;FS=9.920;HRun=1;HaplotypeScore=77.1003;InbreedingCoeff=0.9902;MQ=92.70;MQ0=0;MQRankSum=-0.846;QD=38.37;ReadPosRankSum=1.718;VQSLOD=3.8518;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1917	0/0:7,0:7:21.07:0,21,332	0/0:25,0:25:48.62:0,49,1061	0/0:21,0:21:53.84:0,54,757	0/0:13,0:13:39.11:0,39,577	0/0:15,0:15:45.15:0,45,719	0/0:17,0:17:51.16:0,51,791	0/0:45,0:45:99:0,132,2040	0/0:19,0:19:57.19:0,57,908	0/0:18,0:18:54.18:0,54,864	0/0:10,0:10:30.10:0,30,479	0/0:18,0:18:54.18:0,54,863	0/0:8,0:8:24.08:0,24,382	0/0:20,0:20:60.19:0,60,936	0/0:22,0:22:66.23:0,66,1055	0/0:21,0:21:63.18:0,63,978	1/1:0,19:19:57.19:797,57,0	1/1:0,15:15:45.15:629,45,0	0/0:22,0:22:66.18:0,66,968	0/0:16,0:16:48.16:0,48,767	0/0:38,0:38:99:0,111,1769	0/0:7,0:7:21.07:0,21,336	0/0:8,0:8:21.07:0,21,333	0/0:18,0:18:51.17:0,51,815	0/0:11,0:11:33.10:0,33,505	0/0:14,0:14:42.14:0,42,671	0/0:14,0:14:42.14:0,42,667	0/0:7,0:7:21.07:0,21,336
chr10	96729091	.	T	TA	2603.48	PASS	AB=0.823;AC=26;AF=0.464;AN=56;BaseQRankSum=2.728;DP=553;FS=0.425;HRun=15;HaplotypeScore=101.3549;InbreedingCoeff=0.0864;MQ=69.30;MQ0=4;MQRankSum=-2.999;QD=6.57;ReadPosRankSum=-4.644;VQSLOD=1.4947;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:26:34.69:0,35,119	0/1:4,4:8:15.06:102,0,15	0/1:25,0:22:5.67:6,0,30	0/0:12,0:7:2.50:0,3,17	0/1:27,5:31:9.24:210,0,9	0/1:13,1:16:26:26,0,63	0/1:6,1:8:11.42:11,0,46	1/1:12,12:26:9.72:201,10,0	0/0:11,0:15:19.07:0,19,94	0/0:22,0:24:25.13:0,25,149	0/1:13,0:15:15.69:16,0,107	0/0:14,1:16:1.16:0,1,116	0/0:13,0:13:7.69:0,8,124	0/1:11,4:16:21.89:22,0,99	1/1:9,6:16:35.73:274,36,0	0/0:1,0:9:14.23:0,14,41	0/1:9,15:27:25.69:213,0,26	1/1:2,12:15:17.82:140,18,0	1/1:11,6:23:20.21:222,20,0	0/1:8,10:19:24.80:164,0,25	0/1:6,3:9:9.02:42,0,9	0/0:21,0:22:30.20:0,30,175	0/1:22,1:25:5.89:6,0,174	0/0:16,0:20:41.33:0,41,231	1/1:17,12:32:35.53:505,36,0	1/1:19,6:27:18.37:170,18,0	1/1:14,13:29:1.87:262,2,0	0/1:18,5:25:24.09:193,0,24
chr10	96729138	.	ATT	A	2890.76	PASS	AB=0.594;AC=9;AF=0.161;AN=56;BaseQRankSum=5.621;DP=507;FS=2.035;HRun=7;HaplotypeScore=77.1718;InbreedingCoeff=0.8621;MQ=69.83;MQ0=1;MQRankSum=-1.240;QD=29.80;ReadPosRankSum=1.482;VQSLOD=3.6279;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.31:0,90,1569	1/1:1,8:9:21.07:267,21,0	0/0:17,0:17:39.47:0,39,572	0/0:8,0:7:18.06:0,18,310	1/1:0,23:23:63.20:803,63,0	0/0:16,0:16:48.16:0,48,836	0/0:13,0:13:39.13:0,39,682	0/0:16,0:16:45.15:0,45,785	0/0:9,0:9:27.09:0,27,472	0/0:22,0:22:63.20:0,63,1037	0/0:21,0:21:60.16:0,60,1007	0/0:11,0:11:30.10:0,30,525	0/0:14,0:14:42.14:0,42,731	0/0:12,0:12:30.10:0,30,524	1/1:1,17:18:48.15:612,48,0	0/0:12,0:12:36.12:0,36,623	0/0:27,0:27:75.26:0,75,1286	0/0:14,0:15:30.10:0,30,524	0/0:29,0:28:69.23:0,69,1175	0/0:25,0:25:75.26:0,75,1308	0/0:6,0:6:18.06:0,18,315	0/0:20,0:20:54.18:0,54,933	0/0:26,0:26:72.24:0,72,1235	0/0:21,0:21:57.20:0,57,994	1/1:3,25:28:72.23:917,72,0	0/1:6,13:19:56.86:457,0,57	0/0:25,0:25:63.22:0,63,1079	0/0:14,0:14:42.14:0,42,733
chr10	96729603	.	T	TG	10974.97	PASS	AB=0.920;AC=53;AF=0.946;AN=56;BaseQRankSum=5.679;DP=551;FS=0.638;HRun=0;HaplotypeScore=229.0411;InbreedingCoeff=0.4727;MQ=77.25;MQ0=0;MQRankSum=-9.449;QD=20.67;ReadPosRankSum=3.768;VQSLOD=4.5775;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,33:39:97.29:746,97,0	1/1:0,13:13:38.48:321,38,0	0/1:20,2:23:50.74:51,0,548	0/0:19,1:20:3.10:0,3,455	1/1:2,13:15:17.45:148,17,0	1/1:0,23:24:68.65:516,69,0	1/1:0,19:19:55.85:409,56,0	1/1:1,25:26:74.94:664,75,0	1/1:1,20:21:62.07:448,62,0	1/1:1,24:25:67.56:543,68,0	1/1:0,15:14:38.29:410,38,0	1/1:0,22:22:61.82:481,62,0	1/1:0,17:17:50.15:386,50,0	1/1:0,20:20:58.75:482,59,0	1/1:0,13:13:35.27:263,35,0	1/1:7,18:25:74.01:612,74,0	1/1:4,16:20:47.12:354,47,0	1/1:6,10:16:35.78:279,36,0	1/1:1,9:10:30.01:289,30,0	1/1:4,24:26:77.06:781,77,0	1/1:7,14:21:35.63:386,36,0	1/1:0,20:23:55.71:455,56,0	1/1:0,17:17:47.08:435,47,0	1/1:1,19:20:34.45:182,34,0	1/1:0,11:10:29.43:228,29,0	1/1:0,17:17:50.86:420,51,0	1/1:3,18:21:62.05:514,62,0	1/1:0,9:9:26.61:170,27,0
chr10	96729605	.	GA	G	3576.07	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.062;DP=550;FS=0.000;HRun=3;HaplotypeScore=254.3119;InbreedingCoeff=0.8511;MQ=75.89;MQ0=0;MQRankSum=-9.077;QD=7.03;ReadPosRankSum=6.548;VQSLOD=0.2017;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,33:40:63.07:270,63,0	1/1:1,12:13:21.91:73,22,0	0/0:21,1:22:36.36:0,36,629	0/0:19,0:19:50.76:0,51,550	1/1:0,15:15:4.53:12,5,0	1/1:2,22:24:31.97:112,32,0	1/1:1,18:19:31.59:95,32,0	1/1:2,24:26:68.14:358,68,0	1/1:1,20:21:43.66:159,44,0	1/1:0,25:25:59.68:327,60,0	1/1:1,14:14:3.97:16,4,0	1/1:1,22:23:36.94:135,37,0	1/1:0,17:17:29.84:95,30,0	1/1:2,19:21:31.37:108,31,0	1/1:0,13:13:20.12:62,20,0	1/1:9,18:27:63.87:369,64,0	1/1:3,16:19:26.75:95,27,0	1/1:6,10:16:32.23:173,32,0	1/1:1,9:10:29:182,29,0	1/1:5,22:25:32.08:149,32,0	1/1:8,13:21:14.28:77,14,0	1/1:2,20:22:23.64:71,24,0	1/1:1,17:18:19.04:71,19,0	1/1:0,19:19:19.30:54,19,0	1/1:0,11:10:16.06:48,16,0	1/1:1,16:17:44.26:201,44,0	1/1:3,18:21:40.74:190,41,0	1/1:0,9:9:21.46:74,21,0
chr10	96730161	.	G	GGGA	255.03	PASS	AB=0.824;AC=5;AF=0.089;AN=56;BaseQRankSum=5.030;DP=431;FS=19.109;HRun=0;HaplotypeScore=80.6947;InbreedingCoeff=-0.0332;MQ=67.10;MQ0=0;MQRankSum=0.390;QD=3.70;ReadPosRankSum=-0.899;VQSLOD=0.4151;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:17:33.20:0,33,205	0/0:10,0:10:30.10:0,30,468	0/0:35,0:30:79.65:0,80,1133	0/0:22,0:21:47.21:0,47,639	0/0:16,0:16:45.09:0,45,616	0/0:10,0:10:4.90:0,5,40	0/0:15,0:15:8.73:0,9,75	0/0:15,0:14:28.54:0,29,314	0/0:11,0:10:5.98:0,6,48	0/0:9,0:9:17.98:0,18,162	0/0:5,0:5:3.31:0,3,24	0/0:13,0:13:14.03:0,14,99	0/1:10,0:10:4.22:61,0,4	0/1:15,0:15:50.13:66,0,50	0/0:31,0:31:87.21:0,87,1315	0/1:6,0:6:6.06:6,0,27	0/1:4,15:19:17.91:129,0,18	0/1:4,0:19:55.41:105,0,55	0/0:15,0:14:30.95:0,31,391	0/0:14,0:14:11.77:0,12,147	0/0:17,0:17:19.81:0,20,224	0/0:8,0:8:1.45:0,1,88	0/0:10,0:10:13.04:0,13,83	0/0:18,0:17:13.78:0,14,132	0/0:20,0:20:54.12:0,54,810	0/0:17,0:17:51.16:0,51,830	0/0:22,0:22:36.87:0,37,430	0/0:12,0:12:20.01:0,20,264
chr10	96731219	.	T	TTTC	7829.34	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=3.199;DP=605;FS=9.188;HRun=0;HaplotypeScore=100.3417;InbreedingCoeff=0.8958;MQ=61.73;MQ0=5;MQRankSum=-2.462;QD=17.75;ReadPosRankSum=1.605;VQSLOD=4.2675;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,32:39:62.23:1109,62,0	0/0:16,0:16:42.01:0,42,477	0/0:29,0:12:14.29:0,14,137	0/0:20,0:11:16.44:0,16,124	0/0:32,0:32:75:0,75,737	1/1:17,0:17:27.08:398,27,0	1/1:32,0:31:21.88:526,22,0	1/1:12,20:31:62.87:730,63,0	1/1:22,0:22:21.07:324,21,0	1/1:26,0:24:53.91:558,54,0	1/1:16,0:16:29.31:427,29,0	1/1:20,1:21:11.96:195,12,0	1/1:20,0:20:0.34:171,0,0	1/1:14,0:14:6:69,6,0	0/0:25,0:25:66.02:0,66,774	1/1:5,13:17:26.67:447,27,0	1/1:27,0:27:33.10:447,33,0	1/1:23,0:23:38.86:392,39,0	1/1:13,1:14:27.03:375,27,0	1/1:10,1:10:19.13:246,19,0	1/1:5,11:16:5.97:57,6,0	1/1:6,7:13:23.75:228,24,0	1/1:14,0:14:11.87:124,12,0	1/1:27,0:27:18.95:280,19,0	0/0:25,0:25:60.02:0,60,686	0/0:17,0:17:45.02:0,45,487	1/1:8,22:30:28.02:426,28,0	1/1:2,6:8:15.05:297,15,0
chr10	96731225	.	C	CTTCT	8343.47	PASS	AB=0.776;AC=42;AF=0.750;AN=56;BaseQRankSum=0.264;DP=631;FS=17.222;HRun=0;HaplotypeScore=102.0890;InbreedingCoeff=0.7865;MQ=58.09;MQ0=5;MQRankSum=-3.018;QD=16.86;ReadPosRankSum=2.861;VQSLOD=3.4575;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:41:64.06:780,64,0	0/0:11,0:14:42.02:0,42,564	0/1:27,0:10:11.89:12,0,99	0/0:17,0:9:14.06:0,14,120	0/0:29,0:30:74.90:0,75,802	1/1:4,16:23:27.06:525,27,0	1/1:4,24:33:16.97:649,17,0	1/1:24,1:25:47.02:642,47,0	1/1:2,17:22:21.07:508,21,0	1/1:6,21:26:62.54:713,63,0	1/1:4,13:20:29.78:613,30,0	1/1:4,14:21:12.51:256,13,0	0/1:4,14:21:0.35:264,0,0	1/1:2,14:18:6.02:122,6,0	0/0:24,0:26:69.01:0,69,942	1/1:21,0:20:9.39:282,9,0	1/1:1,0:28:27.56:462,28,0	1/1:14,0:21:27.94:422,28,0	1/1:7,6:13:26.90:384,27,0	1/1:12,0:13:16.93:222,17,0	1/1:15,0:15:6.44:58,6,0	1/1:12,0:14:28.36:286,28,0	1/1:5,11:18:11.87:170,12,0	1/1:2,20:28:18.06:424,18,0	0/0:29,0:29:61.73:0,62,803	0/0:15,0:17:43.81:0,44,529	1/1:30,1:31:10.06:325,10,0	1/1:8,0:8:18.50:224,19,0
chr10	96731226	.	T	TTC	4969.45	PASS	AB=0.972;AC=34;AF=0.607;AN=56;BaseQRankSum=6.086;DP=627;FS=2.390;HRun=0;HaplotypeScore=97.8782;InbreedingCoeff=0.3953;MQ=57.75;MQ0=7;MQRankSum=-1.243;QD=10.78;ReadPosRankSum=5.948;VQSLOD=4.5420;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:42,1:43:27.11:597,27,0	0/0:14,0:14:41.88:0,42,460	0/0:28,0:10:16.71:0,17,148	0/0:21,0:9:14.25:0,14,113	0/0:31,0:30:77.85:0,78,749	1/1:22,1:23:7.27:267,7,0	1/1:32,1:32:30.98:348,31,0	1/1:24,0:23:33.62:493,34,0	1/1:21,0:21:21.02:223,21,0	1/1:27,0:25:26.08:442,26,0	0/1:19,0:20:3.94:252,0,4	0/1:20,0:20:25.79:106,0,26	0/1:21,0:21:14.16:110,0,14	0/1:17,0:17:10.77:32,0,11	0/0:24,0:24:71.94:0,72,839	0/1:20,1:20:19.04:246,0,19	1/1:28,0:27:25.77:228,26,0	1/1:21,0:21:3.24:295,3,0	0/1:12,1:13:6.81:257,0,7	1/1:14,0:13:6.04:158,6,0	0/1:15,0:15:10.80:48,0,11	0/1:14,1:15:0.92:163,0,1	1/1:17,0:17:11.02:108,11,0	1/1:28,0:28:18.52:192,19,0	0/0:29,0:29:70.83:0,71,763	0/0:19,0:18:46.15:0,46,471	1/1:31,1:31:3.97:253,4,0	1/1:8,0:8:11.90:153,12,0
chr10	96731227	.	T	TC	2627.19	PASS	AB=0.982;AC=26;AF=0.464;AN=56;BaseQRankSum=7.942;DP=617;FS=1.774;HRun=0;HaplotypeScore=94.5794;InbreedingCoeff=-0.0826;MQ=57.31;MQ0=8;MQRankSum=-0.408;QD=5.85;ReadPosRankSum=7.591;VQSLOD=2.7961;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:41,2:43:13.72:334,0,14	0/0:14,0:14:38.65:0,39,417	0/0:27,0:10:13.23:0,13,114	0/0:23,0:9:14.45:0,14,117	0/0:31,0:30:73.08:0,73,699	0/1:24,0:24:19.24:154,0,19	0/1:31,0:31:3.47:147,0,3	0/1:23,0:22:0.52:295,0,1	0/1:21,0:21:0.57:99,0,1	1/1:23,0:21:6.16:281,6,0	0/1:21,0:21:25.03:148,0,25	0/1:20,0:20:29.86:48,0,30	0/1:21,0:21:20.98:53,0,21	0/1:17,0:17:7.08:7,0,37	0/0:24,0:24:69.50:0,70,761	0/1:18,1:18:66.82:134,0,67	1/1:28,0:27:14.61:86,15,0	1/1:18,0:18:4.19:229,4,0	0/1:12,0:12:15.34:147,0,15	0/1:12,2:13:33.12:132,0,33	0/1:15,0:14:12.28:28,0,12	0/1:15,0:15:16.40:87,0,16	0/1:17,0:17:49.78:54,0,50	1/1:28,0:28:18.09:106,18,0	0/0:29,0:29:75.91:0,76,765	0/0:20,0:19:46.48:0,46,475	0/1:29,1:29:47.25:151,0,47	1/1:8,0:8:9.15:78,9,0
chr10	96731440	.	GTT	G	6459.56	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=3.048;DP=538;FS=1.662;HRun=13;HaplotypeScore=75.4997;InbreedingCoeff=0.9680;MQ=72.58;MQ0=2;MQRankSum=0.397;QD=20.19;ReadPosRankSum=1.015;VQSLOD=4.4899;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,26:35:62.97:661,63,0	0/0:8,0:8:15.03:0,15,198	0/0:24,0:19:17.56:0,18,186	0/0:5,0:3:6.48:0,6,63	0/0:27,0:29:77.17:0,77,1003	1/1:2,14:16:42.03:407,42,0	1/1:2,15:18:44.80:419,45,0	1/1:8,29:38:92.52:844,93,0	1/1:3,11:14:27.02:262,27,0	0/0:3,1:23:24.21:0,24,159	0/0:3,1:18:9.20:0,9,136	1/1:1,14:16:29.98:340,30,0	1/1:4,15:21:35.86:381,36,0	1/1:2,10:13:29.74:273,30,0	0/0:17,0:17:48.10:0,48,653	1/1:4,15:20:41.76:390,42,0	0/0:27,0:31:69.64:0,70,826	0/0:14,0:15:38.54:0,39,468	1/1:10,12:21:20.49:313,20,0	1/1:3,17:21:53.72:485,54,0	1/1:6,3:11:14.46:111,14,0	1/1:2,10:12:26.90:240,27,0	1/1:1,8:10:27.02:259,27,0	1/1:1,5:6:15.02:145,15,0	0/0:17,0:18:35.58:0,36,435	0/0:26,0:29:73.80:0,74,965	1/1:4,21:25:48.06:465,48,0	1/1:4,15:20:40.85:464,41,0
chr10	96731846	.	G	GA	9743.97	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=0.441;DP=578;FS=0.000;HRun=9;HaplotypeScore=69.9636;InbreedingCoeff=0.9545;MQ=62.90;MQ0=10;MQRankSum=-0.791;QD=21.46;ReadPosRankSum=0.697;VQSLOD=5.4243;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,3:46:80.20:465,80,0	0/0:8,0:8:20.99:0,21,182	0/0:17,0:8:10.59:0,11,104	0/0:12,0:6:11.61:0,12,81	0/0:22,0:22:59.98:0,60,520	1/1:3,24:27:63.17:697,63,0	1/1:3,14:17:36.10:396,36,0	1/1:10,32:42:90.67:968,91,0	1/1:4,8:12:4.64:243,5,0	1/1:5,16:21:42.11:461,42,0	1/1:4,16:20:42.11:465,42,0	1/1:2,10:12:24.06:264,24,0	1/1:1,14:15:39.11:431,39,0	1/1:4,13:17:30.08:332,30,0	0/0:23,0:23:53.98:0,54,469	1/1:3,0:20:36.93:185,37,0	1/1:6,12:16:33.09:365,33,0	1/1:7,16:22:42.11:456,42,0	1/1:10,24:35:12.13:794,12,0	1/1:3,17:21:54.14:593,54,0	1/1:4,16:21:47.96:512,48,0	1/1:3,17:20:43:464,43,0	1/1:2,11:13:30.08:330,30,0	1/1:7,9:15:21.06:230,21,0	0/0:16,0:16:44.99:0,45,390	0/0:26,0:26:38.81:0,39,564	1/1:2,19:21:57.15:630,57,0	1/1:2,15:17:42.11:465,42,0
chr10	96732292	.	C	CT	677.51	PASS	AB=0.918;AC=7;AF=0.125;AN=56;BaseQRankSum=-4.656;DP=598;FS=5.755;HRun=12;HaplotypeScore=66.9549;InbreedingCoeff=0.4737;MQ=69.49;MQ0=0;MQRankSum=0.498;QD=5.65;ReadPosRankSum=-1.005;VQSLOD=1.8024;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,33:43:24.98:642,25,0	0/0:11,0:11:26.79:0,27,195	0/1:14,1:14:9.72:10,0,64	0/0:8,0:8:7.19:0,7,46	0/1:22,2:24:3.48:3,0,289	0/0:16,0:16:35.78:0,36,262	0/1:21,3:24:5.34:5,0,281	0/0:32,0:32:34.71:0,35,391	0/0:18,1:21:1.11:0,1,259	0/0:15,0:15:32.72:0,33,234	0/0:18,1:20:13.77:0,14,241	0/0:15,0:15:35.76:0,36,260	0/0:25,0:26:50.39:0,50,360	0/0:21,0:21:44.59:0,45,322	0/0:20,0:21:50.59:0,51,366	1/1:3,10:13:15.02:146,15,0	0/0:25,0:25:68.54:0,69,497	0/0:23,0:23:56.65:0,57,416	0/0:18,0:18:17.50:0,17,239	0/0:16,0:16:32.79:0,33,241	0/0:18,0:20:40.74:0,41,288	0/0:20,1:22:20.45:0,20,302	0/0:18,0:18:38.74:0,39,284	0/0:37,1:38:60.15:0,60,596	0/0:18,1:22:4.64:0,5,179	0/0:34,0:34:73.81:0,74,518	0/0:19,0:19:41.74:0,42,306	0/0:16,0:16:44.74:0,45,328
chr10	96734795	.	GGGGCAAGGTAGGAGCGGGGCAAGGTAGGAGCA	G	179.77	PASS	AB=1.000;AC=4;AF=0.077;AN=52;BaseQRankSum=3.103;DP=177;FS=3.907;HRun=0;HaplotypeScore=148.9114;InbreedingCoeff=0.1065;MQ=101.04;MQ0=1;MQRankSum=2.659;QD=3.91;ReadPosRankSum=0.311;VQSLOD=2.8027;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:18.06:0,18,883	0/0:2,0:2:6.02:0,6,161	0/1:11,0:9:15.82:16,0,277	0/1:31,0:19:16.96:17,0,609	0/0:3,0:3:3.48:0,3,126	0/0:6,0:6:12.04:0,12,896	0/0:12,0:12:18.06:0,18,996	0/0:4,0:4:9.02:0,9,268	0/0:7,0:7:21.06:0,21,1034	0/0:3,0:3:6.02:0,6,415	0/0:1,0:1:3.01:0,3,191	0/0:8,0:8:24.08:0,24,1261	0/0:5,0:5:9.03:0,9,525	0/0:5,0:5:12.04:0,12,782	0/0:3,0:3:9.03:0,9,679	0/0:4,0:4:6.02:0,6,459	1/1:0,4:4:3.01:245,3,0	./.	0/0:4,0:4:9.03:0,9,633	0/0:1,0:1:3.01:0,3,177	0/0:21,0:21:54.19:0,54,4057	0/0:5,0:5:15.05:0,15,1075	0/0:2,0:2:6.02:0,6,515	0/0:6,0:6:15.05:0,15,1153	0/0:4,0:4:12.04:0,12,831	0/0:6,0:6:12.04:0,12,1349	0/0:4,0:4:12.04:0,12,529	./.
chr10	96734806	.	G	GGA	2654.04	PASS	AB=0.857;AC=25;AF=0.446;AN=56;BaseQRankSum=-2.551;DP=181;FS=4.234;HRun=0;HaplotypeScore=42.8511;InbreedingCoeff=0.6725;MQ=101.45;MQ0=1;MQRankSum=-2.897;QD=38.46;ReadPosRankSum=3.790;VQSLOD=5.6485;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:14.90:0,15,215	0/0:2,0:2:6.02:0,6,84	0/0:11,0:10:0.83:0,1,147	0/0:26,0:20:35.13:0,35,365	0/0:4,0:4:5.63:0,6,86	1/1:0,4:5:12.04:220,12,0	1/1:1,8:9:27.09:479,27,0	0/0:4,0:4:9.03:0,9,127	1/1:1,6:7:18.06:330,18,0	1/1:1,1:2:6.02:93,6,0	1/1:0,1:1:3.01:55,3,0	1/1:0,8:9:24.08:440,24,0	1/1:1,3:4:12.04:202,12,0	1/1:0,5:5:15.05:274,15,0	0/0:4,0:4:9.03:0,9,129	0/0:3,0:3:9.03:0,9,129	1/1:4,0:4:1.25:3,1,0	0/0:2,0:2:2.99:0,3,24	0/0:7,0:7:18.06:0,18,256	0/0:1,0:1:3.01:0,3,43	0/0:24,0:24:69.20:0,69,944	1/1:1,6:8:18.06:329,18,0	1/1:0,2:2:6.02:110,6,0	1/1:1,6:7:15.05:274,15,0	0/0:8,0:8:24.08:0,24,339	0/1:5,1:6:39.98:40,0,157	0/0:6,0:6:18.02:0,18,230	0/0:1,0:1:3.01:0,3,43
chr10	96734823	.	GA	G	143.81	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=2.958;DP=204;FS=7.082;HRun=1;HaplotypeScore=49.9237;InbreedingCoeff=0.6778;MQ=85.20;MQ0=0;MQRankSum=-2.303;QD=14.38;ReadPosRankSum=-0.160;VQSLOD=2.4583;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:24.08:0,24,380	./.	0/0:7,0:7:21.07:0,21,333	0/0:13,0:13:30.09:0,30,428	0/0:5,0:5:12.51:0,13,192	0/0:8,0:8:21.06:0,21,310	0/0:12,0:12:36.12:0,36,575	0/0:5,0:5:15.05:0,15,230	0/0:8,0:8:21.07:0,21,334	0/0:5,0:5:15.05:0,15,240	0/0:4,0:4:12.04:0,12,192	0/0:13,0:13:33.11:0,33,527	0/0:6,0:6:18.06:0,18,287	0/0:5,0:5:15.05:0,15,235	0/0:4,0:4:12.04:0,12,192	0/0:4,0:4:12.04:0,12,192	1/1:4,0:4:3.01:38,3,0	1/1:0,6:6:15.05:210,15,0	0/0:8,0:8:21.04:0,21,306	0/0:3,0:3:9.03:0,9,140	0/0:27,0:27:78.27:0,78,1246	0/0:9,0:9:24.07:0,24,362	0/0:5,0:5:9.03:0,9,144	0/0:15,0:15:36.12:0,36,569	0/0:8,0:8:24.08:0,24,384	0/0:7,0:7:21.07:0,21,336	0/0:4,0:4:12.04:0,12,192	0/0:1,0:1:3.01:0,3,48
chr10	96735081	.	AT	A	2284.46	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=1.956;DP=460;FS=0.850;HRun=13;HaplotypeScore=106.1894;InbreedingCoeff=0.9623;MQ=77.64;MQ0=0;MQRankSum=-0.586;QD=14.37;ReadPosRankSum=2.979;VQSLOD=3.7739;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:68.26:0,68,688	0/0:3,0:3:9.01:0,9,88	0/0:22,1:17:27.14:0,27,239	0/0:14,0:11:4.24:0,4,66	0/0:10,0:10:17.82:0,18,159	1/1:4,18:23:46.74:334,47,0	1/1:2,18:22:42.12:295,42,0	0/0:8,0:24:54.63:0,55,307	1/1:2,8:10:20.88:153,21,0	1/1:3,14:18:43.62:302,44,0	1/1:0,9:9:23.85:175,24,0	1/1:3,12:15:35.78:263,36,0	1/1:2,12:17:35.68:236,36,0	1/1:1,14:15:35.80:263,36,0	0/0:26,1:27:46.48:0,46,582	0/0:18,2:20:21.39:0,21,352	0/0:22,3:26:28.03:0,28,564	0/0:17,0:17:39.06:0,39,379	0/0:10,0:22:40.18:0,40,224	0/0:3,0:13:31.55:0,32,179	0/0:9,0:16:26.38:0,26,198	1/1:1,10:12:28.87:203,29,0	1/1:2,8:10:17.88:131,18,0	1/1:0,8:8:20.88:153,21,0	0/0:10,0:10:27.04:0,27,259	0/0:17,0:18:15.02:0,15,320	0/0:9,0:18:31.69:0,32,195	0/0:0,0:7:17.04:0,17,85
chr10	96735878	.	T	TTGTG	807.89	PASS	AB=0.879;AC=23;AF=0.460;AN=50;BaseQRankSum=-2.375;DP=701;FS=0.000;HRun=0;HaplotypeScore=163.7205;InbreedingCoeff=0.1347;MQ=64.83;MQ0=6;MQRankSum=-0.169;QD=2.13;ReadPosRankSum=-2.241;VQSLOD=2.0239;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:41:2.90:0,3,28	./.	./.	./.	1/1:23,0:23:3.01:70,3,0	0/1:14,0:18:6.68:7,0,40	0/1:27,0:34:16.22:42,0,16	1/1:22,0:21:2.98:21,3,0	0/0:16,0:19:14.96:0,15,157	0/1:31,0:31:16.15:87,0,16	0/1:23,0:31:13.21:13,0,81	1/1:20,0:28:2.74:12,3,0	0/1:14,0:15:3.42:3,0,83	0/1:8,0:12:16.36:16,0,35	1/1:11,4:21:6.02:121,6,0	0/0:13,0:19:3:0,3,28	0/0:23,0:38:32.35:0,32,303	0/0:27,0:33:11.94:0,12,107	0/1:19,0:18:0:0,0,0	0/0:16,0:18:21.52:0,22,283	0/0:50,0:50:17.67:0,18,214	1/1:12,0:18:2.74:12,3,0	0/1:19,0:20:18.58:19,0,67	0/1:23,0:35:31.72:32,0,57	1/1:23,0:23:17.98:273,18,0	1/1:29,0:29:16.44:232,16,0	0/0:19,0:19:2.08:0,2,44	0/0:8,0:8:5.61:0,6,72
chr10	96741173	.	T	TA	1072.20	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.404;DP=607;FS=0.000;HRun=9;HaplotypeScore=60.7589;InbreedingCoeff=0.9623;MQ=65.76;MQ0=1;MQRankSum=-0.493;QD=21.44;ReadPosRankSum=-0.659;VQSLOD=4.0099;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,23:30:37.06:622,37,0	0/0:9,0:9:20.99:0,21,182	0/0:17,0:14:17.55:0,18,116	0/0:17,0:10:8.93:0,9,70	0/0:21,0:21:50.98:0,51,443	0/0:32,0:32:80.95:0,81,701	0/0:22,0:22:65.95:0,66,564	0/0:30,0:31:70.97:0,71,600	0/0:20,0:20:53.95:0,54,460	0/0:29,0:29:71.92:0,72,617	0/0:22,0:22:59.98:0,60,521	0/0:17,0:17:35.97:0,36,310	0/0:28,0:28:68.90:0,69,589	0/0:17,0:17:47.97:0,48,413	0/0:21,0:21:56.97:0,57,491	1/1:1,19:20:31.10:571,31,0	0/0:26,0:28:67.98:0,68,574	0/0:25,1:26:35.75:0,36,528	0/0:21,0:21:50.99:0,51,443	0/0:22,0:22:33.91:0,34,469	0/0:29,0:29:77.98:0,78,677	0/0:17,0:18:41.02:0,41,345	0/0:16,0:16:38.74:0,39,312	0/0:17,0:17:25.13:0,25,339	0/0:15,0:15:32.98:0,33,286	0/0:14,0:14:38.98:0,39,335	0/0:32,0:31:86.95:0,87,753	0/0:16,0:16:47.93:0,48,403
chr10	96742254	.	A	AT	1907.97	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-10.452;DP=687;FS=1.718;HRun=7;HaplotypeScore=68.3239;InbreedingCoeff=0.9919;MQ=78.52;MQ0=0;MQRankSum=-2.413;QD=28.48;ReadPosRankSum=3.408;VQSLOD=4.3315;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,39:40:96.29:1160,96,0	0/0:13,0:13:39.06:0,39,377	0/0:19,0:19:33.97:0,34,352	0/0:11,0:11:15.89:0,16,144	0/0:34,0:34:84.13:0,84,811	0/0:13,0:13:33.05:0,33,319	0/0:23,0:23:69.11:0,69,666	0/0:30,0:30:63.08:0,63,604	0/0:23,0:23:63.10:0,63,608	0/0:29,0:29:84.12:0,84,806	0/0:16,0:16:48.08:0,48,463	0/0:25,0:25:72.08:0,72,679	0/0:19,0:19:51.07:0,51,486	0/0:37,0:37:99:0,105,1014	0/0:32,0:32:90.13:0,90,864	1/1:0,27:27:72.22:870,72,0	0/0:32,0:32:87.13:0,87,840	0/0:15,0:15:42.07:0,42,406	0/0:30,0:30:69.10:0,69,666	0/0:22,0:22:60.08:0,60,574	0/0:31,0:31:78.12:0,78,753	0/0:29,0:29:78.12:0,78,753	0/0:26,0:26:66.09:0,66,632	0/0:23,0:23:63.10:0,63,608	0/0:27,0:27:72.11:0,72,695	0/0:26,0:26:75.11:0,75,720	0/0:24,0:24:69.11:0,69,666	0/0:11,0:11:24.03:0,24,231
chr10	96742653	.	AT	A	10686.24	PASS	AB=0.898;AC=45;AF=0.804;AN=56;BaseQRankSum=9.338;DP=682;FS=1.325;HRun=11;HaplotypeScore=78.1477;InbreedingCoeff=0.7078;MQ=68.34;MQ0=0;MQRankSum=-0.573;QD=17.52;ReadPosRankSum=-0.242;VQSLOD=5.6067;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,39:45:99:887,110,0	0/0:12,0:12:36.09:0,36,384	0/1:10,0:10:2.25:2,0,51	0/0:10,0:8:12.39:0,12,107	0/1:21,3:24:13.82:14,0,470	1/1:2,17:20:46.98:375,47,0	1/1:2,12:14:35.09:294,35,0	1/1:8,16:26:49.87:388,50,0	1/1:2,28:30:71.91:591,72,0	1/1:3,26:29:77.81:626,78,0	1/1:0,20:20:53.83:435,54,0	1/1:2,18:20:47.93:394,48,0	1/1:3,30:33:74.74:616,75,0	1/1:2,18:20:47.94:394,48,0	0/0:26,0:26:57.10:0,57,585	1/1:2,14:16:38.68:320,39,0	1/1:7,29:37:71.26:700,71,0	1/1:1,12:14:35:277,35,0	1/1:6,28:34:83.81:678,84,0	1/1:1,19:20:53.71:421,54,0	1/1:4,26:30:50.34:545,50,0	1/1:4,30:34:86.88:714,87,0	1/1:1,26:27:68.49:566,68,0	1/1:4,25:29:65.91:542,66,0	0/0:23,0:23:63.15:0,63,665	0/1:22,6:29:73.50:74,0,559	1/1:8,30:39:79.57:638,80,0	1/1:2,8:10:23.97:197,24,0
chr10	96745596	.	C	CT	1723.25	PASS	AB=0.796;AC=31;AF=0.554;AN=56;BaseQRankSum=-3.838;DP=433;FS=1.826;HRun=14;HaplotypeScore=54.4377;InbreedingCoeff=0.4737;MQ=72.13;MQ0=1;MQRankSum=0.805;QD=6.09;ReadPosRankSum=-0.057;VQSLOD=2.0753;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,1:17:11.99:70,12,0	0/0:5,0:5:8.86:0,9,58	0/1:26,0:15:1.57:2,0,42	0/0:7,0:5:2.79:0,3,9	0/1:18,1:20:2.18:2,0,173	1/1:2,19:21:35.99:316,36,0	1/1:4,15:18:29.99:264,30,0	0/0:24,0:46:45.74:0,46,154	1/1:1,8:9:9.47:80,9,0	1/1:13,4:18:4.36:139,4,0	1/1:5,8:13:4.67:151,5,0	1/1:4,5:8:6:53,6,0	0/1:5,0:10:5.76:6,0,18	0/1:5,6:11:17.49:17,0,30	0/0:21,0:20:23.36:0,23,153	1/1:6,0:13:14.05:71,14,0	1/1:10,6:17:26.79:212,27,0	1/1:10,9:19:35.95:308,36,0	0/0:10,0:16:10.09:0,10,29	0/0:7,0:18:12.09:0,12,35	0/0:5,0:9:7.58:0,8,22	1/1:3,4:7:6:53,6,0	0/1:4,7:12:1.37:102,0,1	1/1:1,5:6:6:53,6,0	0/1:7,2:9:8.62:9,0,78	0/1:24,2:26:3.08:3,0,110	0/0:10,0:14:6.91:0,7,19	0/0:3,0:13:20.33:0,20,59
chr10	96745725	.	ACG	A	834.63	PASS	AB=0.996;AC=29;AF=0.537;AN=54;BaseQRankSum=-5.461;DP=361;FS=41.709;HRun=0;HaplotypeScore=124.2553;InbreedingCoeff=-0.0918;MQ=72.83;MQ0=3;MQRankSum=0.638;QD=2.93;ReadPosRankSum=2.513;VQSLOD=0.5698;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:20:0.17:92,0,0	1/1:3,1:4:3:25,3,0	1/1:13,0:11:0.47:1,0,0	0/0:17,0:8:0.47:0,0,1	0/0:5,2:8:5.96:0,6,44	0/1:17,1:18:56.16:56,0,91	0/1:22,0:22:74.55:75,0,102	1/1:10,0:18:11.55:62,12,0	0/1:7,0:7:12.74:16,0,13	0/1:14,0:14:36.77:72,0,37	0/1:11,0:10:14.87:15,0,34	0/0:13,0:13:20.86:0,21,156	0/0:10,0:10:9.85:0,10,75	0/0:7,0:7:5.11:0,5,68	0/1:13,0:13:3.60:4,0,112	0/0:10,0:10:4.59:0,5,15	1/1:20,0:20:10.01:122,10,0	0/1:14,0:14:9.55:10,0,36	1/1:12,1:13:11.95:101,12,0	1/1:8,2:11:8.81:69,9,0	./.	0/1:5,0:5:19.02:38,0,19	0/1:15,0:15:11.19:11,0,58	0/1:17,0:17:43.37:43,0,102	0/1:13,0:13:53.78:74,0,54	0/1:15,0:15:54.19:54,0,86	1/1:2,3:5:3.01:35,3,0	1/1:12,0:16:2.84:14,3,0
chr10	96745739	.	G	GCACACACA	1435.50	PASS	AB=0.977;AC=21;AF=0.375;AN=56;BaseQRankSum=-1.336;DP=358;FS=4.859;HRun=0;HaplotypeScore=169.1421;InbreedingCoeff=0.1300;MQ=58.52;MQ0=6;MQRankSum=1.469;QD=7.72;ReadPosRankSum=-0.687;VQSLOD=2.1530;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,3:19:6.51:69,0,7	0/1:7,0:7:17.48:17,0,25	0/0:8,0:5:1.11:0,1,3	0/0:19,0:6:13.75:0,14,101	1/1:9,0:9:5.03:20,5,0	0/0:20,0:19:33.11:0,33,761	0/0:31,0:31:46.07:0,46,887	0/1:15,0:14:8.55:338,0,9	0/1:5,0:5:5.43:5,0,86	0/0:13,0:13:36.09:0,36,667	0/0:10,0:9:11.85:0,12,264	0/0:11,0:11:24.07:0,24,570	0/0:8,0:8:18:0,18,349	0/0:10,0:10:23.93:0,24,410	0/1:14,0:14:16.91:39,0,17	1/1:5,3:8:8.99:258,9,0	0/1:19,0:19:83.81:222,0,84	0/1:12,0:13:99:179,0,176	0/1:13,0:13:48.13:102,0,48	0/1:7,0:6:0.96:21,0,1	1/1:16,0:15:0.47:1,0,0	0/0:5,0:5:5.39:0,5,150	0/0:14,0:14:17.86:0,18,340	0/0:23,0:23:38.86:0,39,746	1/1:12,0:12:23.42:208,23,0	0/1:14,0:14:33.70:106,0,34	1/1:5,0:5:2.31:11,2,0	0/1:8,0:8:1.52:2,0,50
chr10	96747936	.	GGTGT	G	5530.16	PASS	AB=0.883;AC=48;AF=0.923;AN=52;BaseQRankSum=0.532;DP=642;FS=0.000;HRun=0;HaplotypeScore=146.3688;InbreedingCoeff=0.2206;MQ=57.16;MQ0=27;MQRankSum=-0.197;QD=10.13;ReadPosRankSum=0.754;VQSLOD=3.9421;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:36:19.27:171,19,0	1/1:2,0:7:9.01:84,9,0	./.	0/0:34,0:12:0:0,0,0	1/1:10,0:15:3:28,3,0	1/1:6,8:16:11.58:298,12,0	1/1:14,9:24:30.10:452,30,0	./.	1/1:4,9:16:21.06:291,21,0	1/1:17,6:22:4.33:249,4,0	1/1:3,5:9:6.02:94,6,0	1/1:9,9:18:18.52:264,19,0	1/1:5,9:14:15.05:236,15,0	1/1:11,12:25:11.75:188,12,0	1/1:8,0:20:21.02:195,21,0	1/1:5,0:14:24.03:224,24,0	1/1:16,18:36:39.13:594,39,0	1/1:16,10:29:4.75:385,5,0	1/1:28,0:31:9.01:84,9,0	0/1:18,0:23:7.85:72,0,8	0/1:28,0:27:0:0,0,0	1/1:14,6:21:14.84:199,15,0	1/1:9,4:24:15.04:216,15,0	1/1:12,17:31:35.97:527,36,0	1/1:5,0:20:24.03:224,24,0	1/1:21,0:26:20.91:177,21,0	1/1:20,0:30:24.03:224,24,0	1/1:5,0:7:6.01:56,6,0
chr10	96747977	.	G	GCA	1552.89	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=2.677;DP=569;FS=7.735;HRun=0;HaplotypeScore=145.0907;InbreedingCoeff=0.8566;MQ=58.05;MQ0=4;MQRankSum=-3.699;QD=18.71;ReadPosRankSum=-3.044;VQSLOD=2.9156;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:77.66:0,78,962	0/0:10,0:10:18.04:0,18,203	0/0:11,0:8:6.77:0,7,159	0/1:14,0:9:1.02:1,0,58	0/0:14,0:14:8.90:0,9,103	0/0:25,0:25:66.19:0,66,849	0/0:29,0:29:81.69:0,82,1015	1/1:3,15:18:39.57:541,40,0	0/0:20,0:20:38.88:0,39,446	0/0:18,0:18:46.16:0,46,551	0/0:8,0:8:9.02:0,9,104	0/0:25,0:23:56.84:0,57,730	0/0:16,0:16:36.10:0,36,455	0/0:26,0:25:39.09:0,39,497	0/0:20,0:20:38.30:0,38,420	0/0:17,0:16:39.08:0,39,449	0/0:42,0:42:35.96:0,36,238	0/0:26,0:26:32.81:0,33,172	1/1:15,0:14:38.83:431,39,0	1/1:15,0:15:17.98:201,18,0	0/0:6,23:30:0:0,0,0	0/0:18,0:17:30.02:0,30,351	0/0:20,0:20:27.07:0,27,310	0/0:31,0:31:63.16:0,63,752	0/0:25,0:25:39.09:0,39,439	0/0:15,0:15:37.61:0,38,427	1/1:14,0:14:35.66:336,36,0	1/1:7,0:7:18.03:214,18,0
chr10	96748577	.	CT	C	3862.19	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.365;DP=604;FS=14.840;HRun=4;HaplotypeScore=61.2313;InbreedingCoeff=0.9994;MQ=85.00;MQ0=0;MQRankSum=-5.927;QD=31.92;ReadPosRankSum=0.205;VQSLOD=2.5069;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.29:0,93,1282	0/0:12,0:12:33.11:0,33,462	0/0:32,0:32:84.26:0,84,1132	0/0:26,1:26:63.08:0,63,796	0/0:29,0:29:78.25:0,78,1067	0/0:25,0:25:75.25:0,75,1049	0/0:25,0:25:75.22:0,75,1013	1/1:0,28:28:81.24:959,81,0	0/0:9,0:9:24.08:0,24,336	0/0:24,0:24:69.23:0,69,967	0/0:20,0:20:57.18:0,57,781	0/0:27,0:27:75.25:0,75,1049	0/0:15,0:15:45.15:0,45,630	0/0:22,0:22:66.22:0,66,924	0/0:12,0:12:36.12:0,36,504	0/0:19,0:19:54.18:0,54,756	0/0:28,0:28:81.26:0,81,1115	0/0:17,0:17:42.14:0,42,588	1/1:2,23:25:69.19:816,69,0	1/1:0,17:17:45.14:540,45,0	1/1:2,14:16:36.11:432,36,0	0/0:22,0:22:63.19:0,63,849	0/0:21,0:21:63.21:0,63,869	0/0:20,0:20:60.19:0,60,822	0/0:13,0:13:39.12:0,39,528	0/0:32,0:32:93.29:0,93,1271	1/1:0,22:22:54.17:648,54,0	1/1:0,13:13:39.12:468,39,0
chr10	96749781	.	GA	G	2244.74	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=10.170;DP=506;FS=0.926;HRun=9;HaplotypeScore=53.2905;InbreedingCoeff=0.9220;MQ=74.62;MQ0=0;MQRankSum=-2.022;QD=19.19;ReadPosRankSum=-3.346;VQSLOD=2.6166;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:45.13:0,45,519	0/0:11,0:11:33.10:0,33,381	0/0:13,0:13:8.99:0,9,91	0/1:8,0:7:2.34:2,0,111	0/0:21,0:21:54.16:0,54,623	0/0:21,1:22:29.69:0,30,586	0/0:16,0:16:39.12:0,39,450	1/1:8,23:31:69.01:625,69,0	0/0:16,0:16:39.08:0,39,436	0/0:25,0:25:63.18:0,63,721	0/0:19,0:19:51.15:0,51,589	0/0:18,0:18:48.14:0,48,554	0/0:10,0:10:24.07:0,24,277	0/0:25,0:25:69.17:0,69,783	0/0:15,0:15:42.11:0,42,475	0/0:15,0:15:42.12:0,42,485	0/0:22,0:22:54.16:0,54,623	0/0:25,0:25:66.18:0,66,751	1/1:0,10:10:30.02:275,30,0	1/1:3,19:22:57.03:522,57,0	1/1:2,6:8:18.01:165,18,0	0/0:15,0:15:45.09:0,45,485	0/0:15,0:15:36.02:0,36,402	0/0:20,0:20:60.17:0,60,683	0/0:24,0:24:69.20:0,69,790	0/0:23,0:23:66.20:0,66,762	1/1:4,22:26:63.03:576,63,0	1/1:1,11:12:29.98:267,30,0
chr10	96749857	.	CT	C	3532.59	PASS	AB=0.797;AC=30;AF=0.556;AN=54;BaseQRankSum=-11.571;DP=498;FS=0.894;HRun=12;HaplotypeScore=78.4098;InbreedingCoeff=0.8250;MQ=78.26;MQ0=2;MQRankSum=0.334;QD=12.75;ReadPosRankSum=2.777;VQSLOD=3.9509;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:41.84:325,42,0	0/0:2,0:10:11.18:0,11,57	0/1:35,0:17:16.95:17,0,43	0/0:29,1:20:11.46:0,11,97	0/0:7,1:21:13.19:0,13,181	1/1:4,13:18:31.92:238,32,0	1/1:1,12:13:31.92:238,32,0	0/0:11,0:24:36.47:0,36,203	1/1:3,13:16:23.89:186,24,0	1/1:9,14:26:25.80:340,26,0	1/1:4,11:15:20.77:154,21,0	1/1:2,10:12:23.29:170,23,0	1/1:4,2:6:13.71:85,14,0	1/1:7,9:16:8.34:207,8,0	0/0:1,0:17:31.25:0,31,157	1/1:1,5:6:11.95:93,12,0	1/1:5,19:24:50.77:394,51,0	1/1:2,13:15:32.87:255,33,0	0/0:9,0:12:18.14:0,18,95	0/0:13,0:18:39.89:0,40,204	./.	1/1:5,12:17:34.92:261,35,0	0/1:7,15:22:9.61:174,0,10	1/1:3,17:20:50.80:394,51,0	0/0:4,0:19:32.44:0,32,180	0/0:4,0:18:32.89:0,33,176	0/0:13,0:31:65.97:0,66,337	0/0:6,0:18:34.57:0,35,202
chr10	96750493	.	GA	G	547.04	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-0.848;DP=293;FS=4.556;HRun=2;HaplotypeScore=39.3926;InbreedingCoeff=0.8626;MQ=97.55;MQ0=0;MQRankSum=-3.342;QD=10.73;ReadPosRankSum=-1.625;VQSLOD=1.0948;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:14.96:0,15,123	0/0:2,0:2:2.99:0,3,27	0/0:30,0:29:38.62:0,39,622	0/0:25,0:21:46.23:0,46,420	0/0:6,0:6:15.01:0,15,145	0/0:13,0:13:32.63:0,33,300	0/0:20,0:20:43.87:0,44,471	1/1:10,1:11:29.59:221,30,0	0/0:10,0:10:16.39:0,16,203	0/0:8,0:8:21.05:0,21,229	0/0:7,0:7:21:0,21,183	0/0:12,0:12:26.78:0,27,241	0/0:18,0:18:42.46:0,42,383	0/0:10,0:9:20.98:0,21,198	0/0:13,0:13:30.01:0,30,294	0/0:11,0:11:25.25:0,25,253	0/0:11,0:11:26.99:0,27,243	0/0:4,0:4:9.01:0,9,93	1/1:5,1:6:16.71:115,17,0	1/1:4,0:5:9.19:59,9,0	1/1:4,0:4:11.99:99,12,0	0/0:7,0:7:15.31:0,15,102	0/0:7,0:7:13.56:0,14,135	0/0:9,0:9:20.64:0,21,232	0/0:3,0:3:9.01:0,9,81	0/0:6,0:6:14.99:0,15,138	1/1:0,13:13:3.01:39,3,0	1/1:11,1:12:20.44:187,20,0
chr10	96750571	.	A	AAC	1070.59	PASS	AC=34;AF=0.773;AN=44;BaseQRankSum=1.851;DP=421;FS=25.507;HRun=0;HaplotypeScore=90.7667;InbreedingCoeff=0.5039;MQ=71.41;MQ0=5;MQRankSum=0.995;QD=4.12;ReadPosRankSum=-1.679;VQSLOD=0.4807;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,8:23:2.88:41,3,0	0/0:5,0:5:3.46:0,3,24	./.	./.	./.	1/1:14,0:15:6:52,6,0	1/1:16,0:15:7.23:65,7,0	1/1:21,0:21:4.79:10,5,0	1/1:11,1:14:8.99:106,9,0	1/1:17,0:18:18:187,18,0	1/1:16,0:17:5.96:57,6,0	1/1:16,0:16:3:27,3,0	1/1:8,0:8:3.01:39,3,0	1/1:10,0:10:2.65:27,3,0	0/0:15,0:15:6.45:0,6,47	1/1:14,1:15:12.01:139,12,0	0/0:18,0:24:8.43:0,8,40	./.	1/1:15,0:16:5.99:49,6,0	./.	1/1:7,0:7:2.99:24,3,0	1/1:11,0:11:8.99:89,9,0	1/1:14,0:13:9:89,9,0	1/1:17,0:21:15:142,15,0	0/0:4,0:4:2.99:0,3,24	0/0:13,0:13:8.23:0,8,70	1/1:15,0:15:6.01:61,6,0	./.
chr10	96751697	.	TAGGC	T	4405.79	PASS	AC=22;AF=0.458;AN=48;BaseQRankSum=8.688;DP=514;FS=0.497;HRun=0;HaplotypeScore=85.3336;InbreedingCoeff=0.9059;MQ=71.59;MQ0=9;MQRankSum=3.868;QD=19.85;ReadPosRankSum=2.479;VQSLOD=4.6439;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,17:28:45.15:728,45,0	0/0:4,0:4:9.03:0,9,216	0/0:28,0:15:8.93:0,9,110	0/0:37,0:29:9.77:0,10,305	./.	1/1:8,8:16:14.98:212,15,0	1/1:12,12:24:24.08:389,24,0	0/0:27,0:27:39.09:0,39,675	1/1:3,21:24:42.14:680,42,0	1/1:5,5:10:15.01:162,15,0	./.	1/1:9,12:21:24.04:388,24,0	1/1:1,16:17:30.10:484,30,0	1/1:8,13:21:15.05:243,15,0	0/0:20,0:20:39.13:0,39,916	1/1:7,16:23:27.09:438,27,0	0/0:22,0:22:42.12:0,42,913	0/0:22,0:22:51.07:0,51,960	0/0:22,0:22:33.02:0,33,493	./.	0/0:50,0:50:22.21:0,22,1070	./.	1/1:7,1:8:3.01:49,3,0	1/1:7,23:30:39.13:632,39,0	0/0:9,0:9:3.01:0,3,71	0/0:15,0:15:24.07:0,24,530	0/0:9,0:9:18.05:0,18,379	0/0:9,0:9:21.04:0,21,412
chr10	96752451	.	G	GAAAAC	11525.99	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-13.706;DP=622;FS=0.000;HRun=0;HaplotypeScore=148.3140;InbreedingCoeff=0.9112;MQ=73.33;MQ0=4;MQRankSum=2.036;QD=42.22;ReadPosRankSum=-1.736;VQSLOD=4.0876;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:81.19:0,81,1443	0/0:1,0:5:9.03:0,9,105	0/0:39,0:30:16.25:0,16,295	0/1:34,0:22:6.20:6,0,92	0/0:8,0:22:36.11:0,36,419	1/1:7,12:19:30.10:845,30,0	1/1:15,8:23:24.08:657,24,0	0/0:16,0:26:18.05:0,18,210	1/1:6,13:19:36.12:1013,36,0	1/1:10,22:33:72.23:1946,72,0	1/1:6,10:21:42.14:1104,42,0	1/1:10,17:28:57.20:1571,57,0	1/1:3,13:16:27.09:761,27,0	1/1:9,13:25:39.13:1066,39,0	0/0:7,0:19:30.09:0,30,349	0/0:19,0:19:36.06:0,36,534	0/0:9,0:27:48.14:0,48,559	0/0:9,0:23:33.10:0,33,384	0/0:8,0:14:9.01:0,9,94	0/0:11,0:28:39.66:0,40,411	0/0:8,0:12:9.03:0,9,105	1/1:5,7:12:21.07:560,21,0	1/1:7,13:21:42.14:1180,42,0	1/1:9,11:22:30.10:817,30,0	0/0:1,0:20:51.15:0,51,594	0/0:10,0:23:36.04:0,36,402	0/0:3,0:16:33.09:0,33,384	0/0:1,0:13:21.06:0,21,245
chr10	96752860	.	C	CT	4707.41	PASS	AB=0.730;AC=26;AF=0.464;AN=56;BaseQRankSum=-5.116;DP=484;FS=8.694;HRun=10;HaplotypeScore=54.2191;InbreedingCoeff=0.7478;MQ=70.39;MQ0=0;MQRankSum=-0.183;QD=19.37;ReadPosRankSum=1.690;VQSLOD=5.4398;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:88.88:0,89,715	0/0:4,0:4:11.97:0,12,96	0/0:10,0:10:13.70:0,14,101	0/0:13,0:13:15.80:0,16,123	0/0:20,0:22:55.01:0,55,430	1/1:1,17:18:51.13:544,51,0	1/1:1,13:14:33.08:352,33,0	0/0:23,0:23:47.91:0,48,390	1/1:4,14:18:45.05:459,45,0	0/1:3,14:17:1.17:400,0,1	0/1:7,13:19:7.27:317,0,7	1/1:1,14:15:33.08:352,33,0	1/1:4,10:14:8.45:294,8,0	1/1:3,11:14:33.02:338,33,0	0/1:7,1:8:8.01:8,0,148	0/0:18,0:17:41.94:0,42,345	1/1:1,0:23:45.45:227,45,0	1/1:3,0:15:28.41:143,28,0	0/1:18,3:21:12.11:12,0,251	0/0:21,0:21:47.93:0,48,394	0/0:11,0:11:23.96:0,24,197	1/1:1,16:18:41.37:474,41,0	1/1:2,18:20:57.11:596,57,0	1/1:1,7:8:18.05:192,18,0	0/0:22,1:22:30.94:0,31,461	0/0:25,1:27:26.96:0,27,417	0/0:18,1:19:15.95:0,16,337	0/0:14,0:14:23.95:0,24,194
chr10	96752975	.	GGAGGGAGAGAGAGA	G	2842.59	PASS	AB=0.880;AC=32;AF=0.615;AN=52;BaseQRankSum=1.666;DP=266;FS=0.771;HRun=0;HaplotypeScore=77.2653;InbreedingCoeff=0.3186;MQ=52.30;MQ0=15;MQRankSum=-1.103;QD=14.65;ReadPosRankSum=1.925;VQSLOD=1.5252;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:41.52:527,42,0	0/0:4,0:3:3:0,3,27	./.	0/0:12,0:5:5.80:0,6,43	0/0:6,0:6:11.98:0,12,143	1/1:0,13:13:9.03:361,9,0	1/1:6,0:5:11.83:80,12,0	0/1:10,0:6:33:47,0,33	1/1:9,1:10:19.75:378,20,0	1/1:6,10:16:15.31:405,15,0	1/1:7,0:7:8.99:75,9,0	1/1:5,0:4:8.98:74,9,0	1/1:1,10:11:5.56:251,6,0	1/1:0,7:7:3.01:54,3,0	0/0:10,0:10:24.50:0,25,331	1/1:0,0:9:3.01:106,3,0	0/1:3,0:5:19.96:20,0,46	0/1:4,0:10:1.60:19,0,2	0/0:4,0:4:3.01:0,3,121	0/1:6,0:6:48.92:61,0,49	0/1:19,0:16:74.89:75,0,190	1/1:1,11:11:3.01:93,3,0	1/1:3,8:11:8.96:248,9,0	1/1:6,0:5:8.79:69,9,0	0/0:11,0:9:12.02:0,12,154	0/0:11,0:9:24.03:0,24,258	0/1:10,0:8:46.88:71,0,47	./.
chr10	96752977	.	AGG	A	1203.88	PASS	AB=1.000;AC=35;AF=0.673;AN=52;BaseQRankSum=0.405;DP=259;FS=5.293;HRun=3;HaplotypeScore=45.9824;InbreedingCoeff=0.4357;MQ=51.66;MQ0=16;MQRankSum=0.309;QD=6.34;ReadPosRankSum=2.176;VQSLOD=-0.0474;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:17:99:118,0,102	0/0:3,0:2:3:0,3,27	./.	0/0:11,0:4:5.80:0,6,43	0/0:6,0:6:11.97:0,12,97	1/1:13,0:13:8.81:58,9,0	1/1:6,0:5:11.83:80,12,0	1/1:12,0:6:5.96:56,6,0	1/1:10,0:10:19.09:132,19,0	1/1:14,0:14:23.03:167,23,0	1/1:7,0:7:8.99:75,9,0	1/1:4,0:3:8.98:74,9,0	1/1:12,0:12:6.23:45,6,0	1/1:7,0:7:2.90:16,3,0	0/0:10,0:10:13.55:0,14,152	1/1:9,0:9:2.98:22,3,0	1/1:5,0:4:2.98:22,3,0	0/1:10,0:9:12.53:15,0,13	0/0:5,0:5:1.71:0,2,17	0/1:5,0:5:17.05:83,0,17	1/1:21,0:18:3.76:167,4,0	1/1:12,0:11:2.84:14,3,0	1/1:10,0:10:8.59:68,9,0	1/1:6,0:5:7.82:68,8,0	0/0:10,0:8:12:0,12,105	0/0:10,0:8:20.93:0,21,178	1/1:9,0:7:13.89:95,14,0	./.
chr10	96752979	.	GGA	G	559.61	PASS	AC=30;AF=0.714;AN=42;BaseQRankSum=1.360;DP=263;FS=0.000;HRun=0;HaplotypeScore=51.1781;InbreedingCoeff=0.3558;MQ=52.19;MQ0=17;MQRankSum=-2.494;QD=4.06;ReadPosRankSum=1.846;VQSLOD=1.6790;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:0.95:0,1,44	1/1:3,0:2:2.96:19,3,0	./.	./.	./.	1/1:13,0:13:8.69:61,9,0	./.	./.	1/1:11,0:11:15.02:153,15,0	1/1:14,0:14:8.85:76,9,0	./.	1/1:5,0:4:3:25,3,0	1/1:12,0:12:5.47:28,5,0	1/1:7,0:7:3.01:33,3,0	1/1:7,3:10:5.98:54,6,0	1/1:9,0:9:2.84:14,3,0	1/1:5,0:4:2.84:14,3,0	1/1:10,0:9:2.84:14,3,0	0/0:4,0:4:3.01:0,3,42	0/0:5,0:5:3:0,3,27	0/0:20,0:18:2.87:0,3,63	1/1:12,0:11:2.90:33,3,0	1/1:10,0:10:8.85:73,9,0	1/1:8,0:6:5.98:46,6,0	./.	0/0:11,0:9:0:0,0,0	1/1:9,0:7:3.01:33,3,0	0/0:8,0:8:2.99:0,3,24
chr10	96754418	.	TTGA	T	8496.52	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.366;DP=721;FS=9.472;HRun=0;HaplotypeScore=105.8686;InbreedingCoeff=0.9980;MQ=92.55;MQ0=0;MQRankSum=-6.720;QD=39.70;ReadPosRankSum=1.292;VQSLOD=6.0822;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,50:50:99:2029,129,0	0/0:10,0:10:21.07:0,21,469	0/0:33,0:33:87.29:0,87,1803	0/0:30,0:30:85.17:0,85,1767	0/0:28,0:28:84.29:0,84,1874	0/0:24,0:24:69.24:0,69,1541	0/0:26,0:26:72.25:0,72,1547	1/1:6,23:29:69.20:1055,69,0	0/0:17,0:17:51.16:0,51,1034	0/0:29,0:28:84.29:0,84,1848	0/0:21,0:21:60.21:0,60,1340	0/0:17,0:17:45.15:0,45,987	0/0:29,0:29:81.28:0,81,1805	0/0:22,0:22:63.22:0,63,1405	0/0:26,0:26:75.26:0,75,1675	1/1:1,32:33:81.28:1321,81,0	0/0:33,0:32:93.32:0,93,2077	0/0:28,0:28:81.28:0,81,1786	1/1:4,17:21:51.17:824,51,0	1/1:3,17:20:42.14:684,42,0	1/1:1,27:28:75.26:1213,75,0	0/0:24,0:24:66.23:0,66,1454	0/0:20,0:20:54.19:0,54,1187	0/0:40,0:40:99:0,111,2456	0/0:25,0:25:75.26:0,75,1652	0/0:25,0:24:66.23:0,66,1475	1/1:1,24:25:66.23:1077,66,0	1/1:1,7:8:18.06:294,18,0
chr10	96755115	.	T	TC	1064.20	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=-6.592;DP=504;FS=6.570;HRun=7;HaplotypeScore=58.0066;InbreedingCoeff=0.9778;MQ=84.48;MQ0=0;MQRankSum=-4.965;QD=26.60;ReadPosRankSum=1.961;VQSLOD=4.3987;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:53.73:0,54,496	0/0:4,0:4:12.02:0,12,116	0/0:19,0:19:36.01:0,36,334	0/0:24,0:22:47.67:0,48,421	0/0:14,0:14:39.06:0,39,376	0/0:16,0:16:36.04:0,36,341	0/0:16,0:16:48.06:0,48,457	0/0:15,0:15:36:0,36,330	0/0:20,0:20:48.06:0,48,463	0/0:17,0:17:30.03:0,30,286	0/0:8,0:8:18.02:0,18,174	0/0:20,0:20:28.31:0,28,432	0/0:15,0:15:36.03:0,36,341	0/0:28,0:28:75.06:0,75,711	0/0:19,0:19:45.04:0,45,429	0/0:24,0:24:57.08:0,57,546	1/1:2,16:18:45.08:525,45,0	1/1:2,20:22:56.54:660,57,0	0/0:23,0:23:48.05:0,48,453	0/0:12,0:12:24.02:0,24,230	0/0:31,0:31:81.08:0,81,765	0/0:19,0:19:45.05:0,45,429	0/0:12,0:12:29.08:0,29,267	0/0:27,0:27:66.08:0,66,633	0/0:16,0:16:36:0,36,338	0/0:25,0:25:42.02:0,42,395	0/0:19,0:19:42.04:0,42,405	./.
chr10	96755219	.	TA	T	4703.20	PASS	AB=0.579;AC=41;AF=0.732;AN=56;BaseQRankSum=7.249;DP=528;FS=8.614;HRun=14;HaplotypeScore=82.3194;InbreedingCoeff=0.8396;MQ=77.32;MQ0=0;MQRankSum=1.110;QD=11.73;ReadPosRankSum=3.385;VQSLOD=4.3721;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:6,16:22:8.06:240,0,8	0/0:11,0:11:27.03:0,27,251	0/0:22,0:17:11.31:0,11,116	0/0:14,0:14:11.59:0,12,75	0/0:15,0:15:42.01:0,42,378	1/1:3,10:13:4.89:178,5,0	1/1:3,14:19:42.75:279,43,0	1/1:6,16:23:25.20:282,25,0	1/1:1,17:18:47.61:329,48,0	1/1:6,16:23:49.54:331,50,0	1/1:0,11:11:32.72:226,33,0	1/1:2,20:22:41.33:287,41,0	1/1:1,13:15:28.81:191,29,0	1/1:7,17:25:12.09:223,12,0	0/0:23,0:24:50.84:0,51,442	1/1:7,10:17:23.68:164,24,0	1/1:4,0:27:34.60:102,35,0	1/1:4,0:21:32.57:96,33,0	1/1:8,12:24:48.77:295,49,0	1/1:3,14:19:45.63:296,46,0	1/1:8,16:24:10.82:219,11,0	1/1:2,13:16:31.48:211,31,0	1/1:2,13:16:3.92:163,4,0	1/1:3,20:26:53.71:346,54,0	0/0:18,2:20:30.24:0,30,388	0/0:17,0:19:25.34:0,25,344	1/1:4,13:17:26.73:185,27,0	1/1:0,3:3:8.93:62,9,0
chr10	96755940	.	GAAGAA	G	11341.99	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=12.312;DP=750;FS=1.450;HRun=0;HaplotypeScore=157.8194;InbreedingCoeff=0.9997;MQ=77.54;MQ0=7;MQRankSum=-9.970;QD=45.55;ReadPosRankSum=4.094;VQSLOD=5.1782;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,3526	0/0:11,0:11:33.11:0,33,1018	0/0:53,0:44:34.75:0,35,1970	0/0:52,0:36:80.89:0,81,1661	0/0:35,0:35:99:0,105,3115	1/1:0,19:19:30.02:597,30,0	1/1:1,21:22:38.98:856,39,0	0/0:28,0:28:78.26:0,78,2522	1/1:0,20:20:48.16:1101,48,0	1/1:2,28:29:84.22:1657,84,0	1/1:0,18:18:30.10:692,30,0	1/1:0,25:25:45.11:994,45,0	1/1:0,18:18:48.16:1114,48,0	1/1:0,15:15:39.13:904,39,0	0/0:27,0:27:81.25:0,81,2485	0/0:34,0:34:99:0,102,3041	0/0:30,0:30:87.30:0,87,2852	0/0:27,0:27:78.22:0,78,2361	0/0:21,0:21:63.22:0,63,1914	0/0:23,0:23:69.24:0,69,2283	0/0:30,0:30:89.89:0,90,2668	1/1:2,32:33:51.17:1171,51,0	1/1:0,20:20:38.91:876,39,0	1/1:1,27:27:60.21:1381,60,0	0/0:29,0:29:84.28:0,84,2646	0/0:25,0:25:75.24:0,75,2191	0/0:21,0:21:63.22:0,63,2049	0/0:10,0:10:30.08:0,30,922
chr10	96755960	.	GA	G	1083.28	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=2.504;DP=689;FS=1.112;HRun=10;HaplotypeScore=123.1016;InbreedingCoeff=0.7196;MQ=73.55;MQ0=2;MQRankSum=0.799;QD=9.76;ReadPosRankSum=3.996;VQSLOD=2.2879;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:73.93:0,74,923	0/0:9,0:9:21.06:0,21,232	0/0:40,0:33:48.25:0,48,477	0/1:39,0:23:1.61:2,0,139	0/0:27,0:27:72.17:0,72,780	0/1:15,0:15:4.66:5,0,178	0/0:22,0:22:48.08:0,48,516	0/0:40,1:42:76.02:0,76,1026	0/0:19,1:20:19.06:0,19,431	0/0:30,0:31:78.03:0,78,833	0/0:21,0:21:55.39:0,55,596	0/0:21,0:21:48.09:0,48,515	0/0:23,0:23:45.07:0,45,483	0/0:16,0:16:32.91:0,33,314	0/0:25,0:25:60.15:0,60,656	0/0:28,0:28:66.17:0,66,723	1/1:4,28:32:56.32:629,56,0	1/1:2,23:25:65.99:573,66,0	0/0:22,0:22:57.14:0,57,616	0/0:26,0:27:75.03:0,75,808	0/0:20,0:20:45.12:0,45,498	0/0:29,0:29:59.87:0,60,602	0/0:20,0:20:32.78:0,33,329	0/0:27,0:27:66.18:0,66,727	0/0:24,0:25:75.03:0,75,803	0/0:19,0:21:37.21:0,37,503	0/0:17,0:17:45.11:0,45,489	0/0:10,0:10:30.07:0,30,324
chr10	96756405	.	T	TC	4500.97	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=1.624;DP=511;FS=3.729;HRun=1;HaplotypeScore=82.8386;InbreedingCoeff=0.9591;MQ=68.08;MQ0=5;MQRankSum=-2.479;QD=16.37;ReadPosRankSum=1.327;VQSLOD=5.1675;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:48.41:342,48,0	0/0:11,0:11:29.62:0,30,229	0/0:39,0:16:20.77:0,21,251	0/0:35,0:17:11.03:0,11,199	0/0:23,0:24:59:0,59,499	0/0:14,0:15:44.17:0,44,358	0/0:16,0:20:47.93:0,48,412	1/1:15,0:15:36.70:255,37,0	1/1:15,0:15:44.71:366,45,0	1/1:20,0:20:50.68:423,51,0	1/1:6,0:6:17.84:141,18,0	1/1:20,0:20:35.41:319,35,0	1/1:2,11:14:2.74:12,3,0	1/1:9,1:10:20.76:160,21,0	0/0:21,0:24:47.88:0,48,393	1/1:23,0:23:53.64:382,54,0	0/0:17,0:19:50.76:0,51,397	0/0:12,0:12:32.29:0,32,261	1/1:18,0:18:31.29:350,31,0	1/1:22,0:22:54:334,54,0	1/1:13,0:13:32.59:244,33,0	1/1:16,1:17:46.69:348,47,0	1/1:20,0:20:31.39:304,31,0	1/1:15,0:14:26.16:190,26,0	0/0:7,0:7:18:0,18,160	0/0:29,0:29:43:0,43,534	1/1:14,0:14:10.31:135,10,0	1/1:9,1:10:26.54:195,27,0
chr10	96756694	.	TA	T	372.61	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.451;DP=604;FS=3.815;HRun=4;HaplotypeScore=60.2420;InbreedingCoeff=0.9565;MQ=69.37;MQ0=1;MQRankSum=-0.690;QD=20.70;ReadPosRankSum=0.860;VQSLOD=2.9975;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,1368	0/0:13,0:13:36.08:0,36,465	0/0:9,0:9:21.06:0,21,279	0/0:8,0:8:16.86:0,17,204	0/0:30,0:30:78.23:0,78,1042	0/0:20,0:20:60.20:0,60,838	0/0:17,0:17:48.14:0,48,653	0/0:37,0:37:99:0,102,1371	0/0:22,0:22:63.21:0,63,880	0/0:24,0:24:69.23:0,69,961	0/0:26,0:26:75.24:0,75,1026	0/0:22,0:22:63.18:0,63,845	0/0:19,0:19:57.19:0,57,790	0/0:19,0:19:54.16:0,54,738	0/0:16,0:16:45.14:0,45,612	0/0:23,0:23:63.16:0,63,813	0/0:30,0:29:81.26:0,81,1117	1/1:2,16:18:39.12:467,39,0	0/0:28,0:28:69.21:0,69,934	0/0:22,0:22:63.19:0,63,849	0/0:12,0:12:36.10:0,36,472	0/0:24,0:24:66.22:0,66,922	0/0:23,0:23:63.19:0,63,848	0/0:20,0:20:60.17:0,60,792	0/0:18,0:18:54.18:0,54,754	0/0:24,0:24:69.17:0,69,914	0/0:39,0:39:99:0,105,1464	0/0:4,0:4:12.04:0,12,168
chr10	96757059	.	T	TA	1616.10	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.756;DP=567;FS=0.000;HRun=9;HaplotypeScore=56.0333;InbreedingCoeff=0.9839;MQ=75.27;MQ0=0;MQRankSum=-1.599;QD=23.42;ReadPosRankSum=2.242;VQSLOD=4.3826;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:29:60.16:664,60,0	0/0:17,0:17:41.97:0,42,361	0/0:13,0:12:27.82:0,28,210	0/0:15,0:15:10.56:0,11,126	0/0:35,0:35:92.96:0,93,807	0/0:34,0:34:83.96:0,84,729	0/0:17,0:19:46.04:0,46,377	0/0:14,0:14:29.97:0,30,260	0/0:19,0:19:44.97:0,45,387	0/0:19,1:20:26.79:0,27,459	0/0:28,0:28:71.96:0,72,625	0/0:20,0:20:53.96:0,54,465	0/0:21,0:23:67.01:0,67,547	0/0:24,0:24:56.94:0,57,490	0/0:17,0:17:47.99:0,48,417	1/1:3,16:19:45.12:498,45,0	0/0:20,0:20:53.97:0,54,465	1/1:2,19:21:54.15:597,54,0	0/0:15,0:15:38.98:0,39,338	0/0:19,0:19:50.99:0,51,443	0/0:18,0:19:50.02:0,50,423	0/0:13,0:13:29.97:0,30,260	0/0:24,0:24:71.99:0,72,625	0/0:21,0:21:62.99:0,63,547	0/0:21,0:21:59.99:0,60,521	0/0:19,0:19:53.98:0,54,469	0/0:15,0:16:41.01:0,41,340	0/0:12,0:12:32.99:0,33,286
chr10	96757401	.	C	CT	11175.29	PASS	AB=0.581;AC=43;AF=0.768;AN=56;BaseQRankSum=-9.479;DP=573;FS=10.848;HRun=10;HaplotypeScore=61.3972;InbreedingCoeff=0.7136;MQ=76.50;MQ0=1;MQRankSum=-2.685;QD=23.73;ReadPosRankSum=1.072;VQSLOD=5.1670;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:74.84:0,75,616	0/1:2,8:10:0.25:200,0,0	0/0:19,0:19:26.85:0,27,192	0/0:15,0:15:4:0,4,78	1/1:4,37:41:90.70:1116,91,0	1/1:6,12:18:36.03:369,36,0	0/1:3,7:10:6.60:142,0,7	1/1:11,21:32:65.76:653,66,0	1/1:2,22:24:60.15:640,60,0	1/1:4,14:18:20.45:415,20,0	1/1:7,18:25:60.11:626,60,0	1/1:1,12:13:36.09:384,36,0	1/1:2,13:15:39.10:416,39,0	1/1:4,11:16:32.92:334,33,0	1/1:3,17:21:56.97:587,57,0	0/0:16,0:16:47.95:0,48,394	1/1:8,23:31:40.54:618,41,0	0/0:15,0:15:40.63:0,41,342	1/1:5,26:31:75.13:772,75,0	1/1:5,16:21:44.95:461,45,0	1/1:1,12:13:33.08:352,33,0	1/1:4,8:12:2.38:219,2,0	1/1:2,15:17:39.10:416,39,0	1/1:2,15:17:45.11:480,45,0	0/1:4,8:12:3.59:171,0,4	1/1:4,27:31:83.91:860,84,0	1/1:3,31:34:75.11:784,75,0	1/1:2,6:8:15.04:160,15,0
chr10	96757657	.	GA	G	1234.15	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.717;DP=509;FS=4.733;HRun=6;HaplotypeScore=58.5256;InbreedingCoeff=0.9964;MQ=75.74;MQ0=0;MQRankSum=-5.155;QD=26.83;ReadPosRankSum=0.167;VQSLOD=3.9945;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:69.04:713,69,0	0/0:13,0:13:33.11:0,33,434	0/0:13,0:13:29.73:0,30,311	0/0:10,0:10:22.52:0,23,221	0/0:40,0:40:99:0,117,1523	0/0:23,0:23:66.16:0,66,836	0/0:12,0:12:36.09:0,36,443	0/0:39,0:39:99:0,99,1245	0/0:17,0:17:48.16:0,48,632	0/0:23,0:23:66.21:0,66,865	0/0:13,0:13:36.12:0,36,474	0/0:17,0:17:45.15:0,45,592	0/0:17,0:17:50.83:0,51,642	0/0:15,0:15:39.13:0,39,513	0/0:19,0:19:54.18:0,54,711	1/1:3,19:22:60.15:643,60,0	0/0:25,0:24:69.21:0,69,890	0/0:13,0:13:30.10:0,30,395	0/0:21,0:21:57.18:0,57,745	0/0:24,0:24:72.23:0,72,947	0/0:9,0:9:27.09:0,27,354	0/0:14,0:14:39.12:0,39,498	0/0:10,0:10:30.09:0,30,382	0/0:10,0:10:30.10:0,30,394	0/0:16,0:16:48.16:0,48,630	0/0:21,0:21:57.18:0,57,737	0/0:18,0:18:42.14:0,42,551	0/0:11,0:11:33.11:0,33,434
chr10	96757697	.	GAGA	G	1738.12	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.083;DP=484;FS=0.000;HRun=0;HaplotypeScore=79.8380;InbreedingCoeff=0.9746;MQ=82.27;MQ0=0;MQRankSum=-3.994;QD=35.47;ReadPosRankSum=0.158;VQSLOD=3.9368;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:28:60.15:964,60,0	0/0:9,0:9:27.09:0,27,623	0/0:18,0:18:40.90:0,41,889	0/0:9,0:9:12.04:0,12,445	0/0:31,0:31:93.32:0,93,2122	0/0:19,0:19:54.17:0,54,1199	0/0:17,0:17:51.17:0,51,1126	0/0:25,0:25:69.24:0,69,1576	0/0:10,0:10:30.10:0,30,692	0/0:32,0:32:93.32:0,93,2119	0/0:19,0:19:57.18:0,57,1264	0/0:16,0:16:48.16:0,48,1107	0/0:13,0:13:39.13:0,39,899	0/0:16,0:16:45.15:0,45,1035	0/0:13,0:13:39.13:0,39,882	1/1:3,18:21:54.18:896,54,0	0/0:25,0:24:75.26:0,75,1724	0/0:11,0:11:33.11:0,33,760	0/0:18,0:18:54.19:0,54,1245	0/0:28,0:28:81.28:0,81,1868	0/0:6,0:6:15.05:0,15,346	0/0:12,0:12:36.12:0,36,814	0/0:12,0:12:33.11:0,33,761	0/0:12,0:12:30.10:0,30,673	0/0:17,0:17:51.18:0,51,1162	0/0:18,0:18:51.17:0,51,1151	0/0:20,0:20:60.21:0,60,1379	0/0:9,0:9:27.09:0,27,606
chr10	96758364	.	GT	G	11758.10	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=11.768;DP=546;FS=9.534;HRun=2;HaplotypeScore=65.9654;InbreedingCoeff=0.9993;MQ=77.62;MQ0=0;MQRankSum=-2.445;QD=36.86;ReadPosRankSum=4.101;VQSLOD=5.1249;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.18:0,54,809	1/1:1,7:8:21.07:273,21,0	0/0:17,0:17:51.01:0,51,670	0/0:18,0:18:51.15:0,51,688	1/1:0,23:23:69.16:875,69,0	1/1:2,17:19:57.16:723,57,0	1/1:0,12:12:33.11:428,33,0	0/0:27,0:27:75.24:0,75,1090	1/1:1,13:14:36.12:467,36,0	1/1:0,33:33:99:1258,99,0	1/1:1,18:19:48.16:623,48,0	1/1:0,24:24:69.22:896,69,0	1/1:1,12:13:33.11:428,33,0	1/1:0,19:19:51.17:662,51,0	1/1:1,14:15:42.14:545,42,0	0/0:19,0:19:57.19:0,57,854	1/1:6,31:37:99:1407,111,0	0/0:26,0:26:78.22:0,78,1144	0/0:17,0:17:48.16:0,48,720	0/0:18,0:18:51.17:0,51,764	0/0:32,0:32:93.28:0,93,1350	1/1:0,15:15:45.15:584,45,0	1/1:0,14:14:42.14:545,42,0	1/1:1,15:16:48.16:622,48,0	1/1:0,17:17:48.16:623,48,0	1/1:0,21:21:63.16:799,63,0	0/0:17,0:17:51.17:0,51,761	0/0:16,0:16:48.16:0,48,719
chr10	96758463	.	C	CT	9940.09	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-14.181;DP=546;FS=5.838;HRun=7;HaplotypeScore=50.8087;InbreedingCoeff=0.9708;MQ=68.44;MQ0=1;MQRankSum=0.387;QD=30.77;ReadPosRankSum=2.056;VQSLOD=5.1907;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.12:0,78,753	1/1:0,12:12:33.10:398,33,0	0/0:3,0:3:3:0,3,29	0/0:8,0:8:13.93:0,14,107	1/1:3,20:23:57.16:677,57,0	1/1:2,19:21:57.17:682,57,0	1/1:3,18:21:51.16:616,51,0	0/0:27,0:27:75.10:0,75,717	1/1:1,12:13:30.09:362,30,0	1/1:2,19:21:57.15:666,57,0	1/1:3,20:23:37.22:725,37,0	1/1:1,14:15:39.12:471,39,0	1/1:0,15:15:39.12:471,39,0	1/1:0,10:10:27.08:326,27,0	1/1:2,22:24:66.20:797,66,0	0/0:20,0:20:51.07:0,51,487	1/1:5,38:42:99:1305,108,0	0/0:28,0:28:81.09:0,81,774	0/0:19,0:19:39.05:0,39,376	0/0:29,0:29:83.99:0,84,792	0/0:26,0:26:72.10:0,72,689	1/1:3,9:12:24.07:290,24,0	1/1:3,7:10:21.06:254,21,0	1/1:1,16:17:48.15:580,48,0	1/1:1,16:17:42.13:507,42,0	1/1:3,22:26:69.08:811,69,0	0/0:16,0:16:36.05:0,36,348	0/0:19,0:19:51.08:0,51,492
chr10	96759406	.	C	CGT	1458.45	PASS	AB=0.981;AC=27;AF=0.500;AN=54;BaseQRankSum=-3.647;DP=752;FS=26.232;HRun=0;HaplotypeScore=180.6607;InbreedingCoeff=-0.3949;MQ=65.51;MQ0=20;MQRankSum=0.296;QD=2.24;ReadPosRankSum=-0.919;VQSLOD=1.0290;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:48,1:48:45.27:118,0,45	0/0:9,0:9:1.88:0,2,18	0/0:33,0:25:3.01:0,3,33	./.	0/1:18,2:16:15.47:35,0,15	0/1:24,3:24:6.88:39,0,7	0/1:39,0:37:1.29:152,0,1	1/1:32,0:31:19.90:92,20,0	0/1:25,1:26:59.50:59,0,72	0/1:32,0:32:4.03:130,0,4	0/1:15,0:15:2.61:3,0,13	0/1:35,1:33:12.70:161,0,13	0/1:34,0:32:38.99:39,0,74	0/1:23,1:21:12.64:102,0,13	0/1:25,1:25:7.18:7,0,54	0/1:18,1:17:17.06:42,0,17	0/1:31,0:30:30.90:123,0,31	0/1:20,0:19:14.04:14,0,24	0/1:25,0:25:0.18:77,0,0	0/1:11,0:10:0.26:2,0,0	0/1:35,0:33:6.81:17,0,7	0/1:30,0:30:37.97:40,0,38	0/1:15,0:15:7.27:14,0,7	0/1:30,0:28:24.85:25,0,41	0/0:24,1:22:13.15:0,13,71	1/1:23,1:23:13.65:187,14,0	0/1:31,0:31:9.96:54,0,10	1/1:20,0:18:12.38:71,12,0
chr10	96759441	.	GTC	G	719.45	PASS	AB=0.988;AC=20;AF=0.357;AN=56;BaseQRankSum=-3.459;DP=752;FS=2.257;HRun=0;HaplotypeScore=174.7151;InbreedingCoeff=-0.4396;MQ=39.99;MQ0=31;MQRankSum=-0.108;QD=1.36;ReadPosRankSum=-5.801;VQSLOD=0.8199;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:56,0:54:50.50:50,0,557	0/0:8,0:8:11.28:0,11,57	0/0:3,0:1:3.01:0,3,33	0/1:8,0:4:9.32:12,0,9	0/1:22,0:18:24.02:37,0,24	0/1:29,0:26:28.07:35,0,28	0/1:47,2:46:99:127,0,139	0/0:40,0:39:11.77:0,12,273	0/1:29,0:29:53.66:54,0,121	0/0:40,0:39:19.97:0,20,559	0/1:16,0:15:8.55:9,0,12	0/1:32,0:29:44.18:98,0,44	0/0:29,0:27:5.18:0,5,209	0/1:31,0:27:58.31:65,0,58	0/1:37,0:35:10.21:10,0,59	0/0:20,2:19:13.39:0,13,292	0/1:20,3:22:47.49:118,0,47	0/1:23,0:22:10.03:10,0,155	0/1:28,0:25:40.65:41,0,134	1/1:15,0:14:4.66:12,5,0	0/1:31,0:29:15:15,0,30	0/1:26,0:26:32.95:44,0,33	0/0:25,0:22:8.81:0,9,55	0/0:34,1:32:14.37:0,14,83	0/0:21,0:17:10.37:0,10,65	0/1:32,0:30:72.81:73,0,362	0/1:26,0:26:45.97:46,0,108	0/1:15,1:14:19.43:19,0,64
chr10	96759476	.	T	TG	6795.93	PASS	AB=0.898;AC=33;AF=0.589;AN=56;BaseQRankSum=9.257;DP=788;FS=12.134;HRun=1;HaplotypeScore=159.3495;InbreedingCoeff=0.1006;MQ=62.28;MQ0=9;MQRankSum=-1.592;QD=11.56;ReadPosRankSum=-1.128;VQSLOD=1.8951;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:50:99:0,115,1437	0/1:11,0:11:23.86:26,0,24	0/0:40,0:30:76.92:0,77,1032	0/0:33,0:29:60.80:0,61,922	1/1:18,0:16:10.39:39,10,0	0/1:27,0:27:21.07:39,0,21	1/1:24,23:45:37.53:694,38,0	0/1:15,14:28:99:562,0,154	0/1:27,0:27:47.89:51,0,48	0/1:21,26:46:99:1133,0,337	0/1:24,0:24:9.84:64,0,10	0/1:29,0:27:37.29:78,0,37	0/1:11,21:31:78.84:637,0,79	0/1:24,0:21:20.67:120,0,21	1/1:32,0:32:7.79:30,8,0	0/0:20,0:20:57.19:0,57,738	0/0:26,0:26:3.45:0,3,22	1/1:5,23:27:26.45:816,26,0	1/1:6,16:20:15.56:650,16,0	1/1:23,0:22:19.91:132,20,0	1/1:9,18:26:21.07:310,21,0	1/1:25,0:25:15.30:74,15,0	1/1:12,17:27:23.83:355,24,0	0/0:30,0:29:6.02:0,6,70	1/1:18,0:16:2.60:10,3,0	0/1:35,0:33:99:866,0,180	0/1:23,0:23:21.85:88,0,22	1/1:10,0:9:5.49:24,5,0
chr10	96759481	.	G	GGGCTT	9697.61	PASS	AB=0.564;AC=41;AF=0.732;AN=56;BaseQRankSum=9.691;DP=771;FS=1.743;HRun=0;HaplotypeScore=176.8361;InbreedingCoeff=0.5905;MQ=66.91;MQ0=4;MQRankSum=-5.134;QD=17.07;ReadPosRankSum=-2.694;VQSLOD=4.1713;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:47:99:0,129,2596	1/1:3,0:12:3.19:17,3,0	0/0:41,0:31:90.07:0,90,1874	0/0:36,0:32:93.20:0,93,1778	1/1:7,0:18:15.68:99,16,0	1/1:6,0:23:3.01:63,3,0	1/1:39,0:38:71.34:937,71,0	1/1:24,0:23:38.15:810,38,0	1/1:4,0:28:4.37:47,4,0	1/1:42,0:43:12.19:1461,12,0	1/1:6,0:25:31.47:181,31,0	1/1:5,0:24:6.02:106,6,0	1/1:31,0:30:30.31:909,30,0	1/1:8,1:23:12.01:205,12,0	1/1:5,0:35:6.91:37,7,0	0/0:21,0:21:56.93:0,57,1197	0/0:1,0:23:1.25:0,1,3	1/1:25,0:25:60.11:1010,60,0	1/1:23,0:22:29.71:892,30,0	1/1:2,0:20:30.93:248,31,0	1/1:25,0:25:53.96:513,54,0	1/1:7,0:28:19.22:138,19,0	1/1:28,0:27:43.95:500,44,0	0/0:10,0:34:4.05:0,4,13	0/1:5,0:16:1.05:13,0,1	0/1:8,0:35:5.39:1148,0,5	0/1:4,0:24:9.08:218,0,9	1/1:1,0:8:6.02:146,6,0
chr10	96760139	.	G	GGAAA	41180.01	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-11.815;DP=741;FS=0.747;HRun=0;HaplotypeScore=103.5951;InbreedingCoeff=0.9914;MQ=83.02;MQ0=0;MQRankSum=-10.974;QD=67.62;ReadPosRankSum=3.164;VQSLOD=7.1178;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,2348	1/1:0,13:15:39.07:1057,39,0	0/0:31,0:31:84.27:0,84,1561	0/0:30,0:30:80.21:0,80,1388	1/1:1,22:23:66.11:1513,66,0	1/1:1,20:22:60.21:1600,60,0	1/1:2,18:21:42.14:1107,42,0	1/1:9,33:43:99:3267,129,0	1/1:2,25:27:75.26:2013,75,0	1/1:0,26:29:84.23:2061,84,0	1/1:1,25:27:81.23:2126,81,0	1/1:2,22:25:60.21:1625,60,0	1/1:0,26:26:66.23:1765,66,0	1/1:3,20:23:51.17:1376,51,0	1/1:1,31:32:81.28:2163,81,0	0/0:28,0:28:84.26:0,84,1554	1/1:1,29:33:75.21:1915,75,0	1/1:0,18:18:54.19:1479,54,0	1/1:3,14:17:45.15:1227,45,0	1/1:3,29:34:96.29:2426,96,0	1/1:5,33:40:93.28:2356,93,0	1/1:3,23:26:69.15:1678,69,0	1/1:0,16:17:39.13:1025,39,0	1/1:1,23:25:57.20:1562,57,0	1/1:2,26:31:66.23:1754,66,0	1/1:2,20:23:66.18:1582,66,0	1/1:3,23:28:84.23:2175,84,0	1/1:0,4:4:12.04:328,12,0
chr10	96760935	.	G	GTT	609.16	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.682;DP=643;FS=7.704;HRun=9;HaplotypeScore=134.9504;InbreedingCoeff=0.9350;MQ=71.14;MQ0=0;MQRankSum=0.064;QD=24.37;ReadPosRankSum=0.520;VQSLOD=2.0500;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:78.08:0,78,866	0/0:7,0:7:18.04:0,18,192	0/0:10,0:11:23.65:0,24,210	0/0:11,0:11:8.96:0,9,79	0/0:30,0:30:84.12:0,84,858	0/0:23,0:23:57.14:0,57,607	0/0:21,0:21:63.14:0,63,662	0/0:29,0:29:61.63:0,62,712	0/0:17,0:17:44.51:0,45,477	0/0:32,0:32:75.08:0,75,784	0/0:16,0:16:38.10:0,38,389	0/0:30,0:30:75.12:0,75,789	0/0:22,0:22:60.12:0,60,631	0/0:23,0:23:57.08:0,57,589	0/0:23,0:23:66.05:0,66,672	0/0:27,0:27:72.12:0,72,749	0/0:19,0:19:42.08:0,42,447	1/1:3,20:25:48.15:704,48,0	0/0:26,0:27:51.03:0,51,597	0/0:24,0:24:69.17:0,69,734	0/0:25,0:25:69.09:0,69,706	0/0:23,0:24:57.10:0,57,662	0/0:21,0:21:57.11:0,57,599	0/0:20,0:20:54.07:0,54,562	0/0:16,0:16:45.07:0,45,462	0/0:32,0:33:80.88:0,81,828	0/0:36,0:36:96.18:0,96,1012	0/0:17,0:15:33.04:0,33,351
chr10	96761162	.	GA	G	2553.85	PASS	AB=0.681;AC=48;AF=0.857;AN=56;BaseQRankSum=-2.671;DP=484;FS=3.355;HRun=15;HaplotypeScore=64.7543;InbreedingCoeff=0.1693;MQ=76.71;MQ0=4;MQRankSum=2.546;QD=6.42;ReadPosRankSum=4.892;VQSLOD=2.7780;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,21:34:9.71:147,10,0	1/1:4,3:7:5.87:38,6,0	0/0:47,0:19:1.86:0,2,98	0/0:37,0:19:1.09:0,1,31	1/1:6,5:12:7.71:45,8,0	1/1:2,8:13:10.49:113,10,0	0/1:4,9:14:29.97:79,0,30	1/1:8,3:17:19.54:85,20,0	1/1:4,6:11:10.84:63,11,0	1/1:7,5:15:20.84:112,21,0	1/1:4,8:12:7.48:55,7,0	1/1:5,8:15:18.72:108,19,0	1/1:4,13:19:24.72:146,25,0	1/1:6,6:13:16.76:102,17,0	0/1:7,7:14:0.23:64,0,0	1/1:3,10:13:23.58:154,24,0	1/1:6,11:19:27.63:165,28,0	1/1:3,11:14:29.52:192,30,0	1/1:5,10:15:20.70:146,21,0	1/1:9,4:13:8.76:58,9,0	1/1:3,4:8:7.49:44,7,0	0/1:13,2:18:21.94:26,0,22	0/1:10,7:18:25.07:94,0,25	1/1:3,11:16:24.68:146,25,0	1/1:6,11:19:24.64:145,25,0	1/1:9,11:23:32.04:174,32,0	1/1:12,11:24:25.42:160,25,0	1/1:1,1:2:2.95:19,3,0
chr10	96761981	.	A	AT	16246.54	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.114;DP=596;FS=2.305;HRun=7;HaplotypeScore=51.3270;InbreedingCoeff=0.8396;MQ=73.97;MQ0=0;MQRankSum=-5.881;QD=28.30;ReadPosRankSum=3.617;VQSLOD=5.4402;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:31:78.24:942,78,0	1/1:3,6:9:18.06:217,18,0	0/0:12,0:11:27:0,27,248	0/0:10,0:10:0.68:0,1,86	1/1:2,23:25:41.36:716,41,0	1/1:1,21:22:57.17:689,57,0	1/1:0,9:9:24.07:290,24,0	1/1:10,26:36:72.10:790,72,0	1/1:6,14:20:33.10:399,33,0	1/1:1,33:34:99:1148,99,0	1/1:1,13:14:39.05:446,39,0	1/1:3,27:30:69.21:834,69,0	1/1:1,18:19:39.12:471,39,0	1/1:2,19:21:39.12:471,39,0	1/1:6,26:32:75.23:906,75,0	1/1:1,18:19:45.14:544,45,0	1/1:3,15:18:42.13:507,42,0	1/1:2,19:21:54.17:650,54,0	1/1:5,22:27:69.07:750,69,0	1/1:3,18:21:48.15:580,48,0	1/1:1,12:13:36.11:435,36,0	1/1:1,19:20:51.09:598,51,0	1/1:2,18:20:51.16:615,51,0	1/1:1,19:20:45.14:544,45,0	1/1:0,26:26:66.20:797,66,0	1/1:3,29:32:84.25:1003,84,0	1/1:1,28:29:63.19:761,63,0	1/1:0,4:4:12.04:145,12,0
chr10	96764992	.	C	CA	842.99	PASS	AB=0.821;AC=36;AF=0.667;AN=54;BaseQRankSum=-0.830;DP=160;FS=2.042;HRun=15;HaplotypeScore=30.1240;InbreedingCoeff=0.1347;MQ=65.13;MQ0=8;MQRankSum=-0.925;QD=6.02;ReadPosRankSum=-0.726;VQSLOD=1.0648;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,4:10:2.16:45,2,0	1/1:0,1:1:3:25,3,0	0/1:11,0:8:17.31:24,0,17	0/0:7,0:6:11.67:0,12,67	1/1:9,0:7:8.71:54,9,0	0/0:4,4:7:2.83:0,3,18	0/1:4,4:8:30.96:80,0,31	1/1:10,11:20:0.70:198,1,0	1/1:0,4:4:5.99:50,6,0	0/1:0,1:1:0:0,0,0	0/0:3,0:2:0.03:0,0,10	./.	0/1:4,3:7:8.10:42,0,8	1/1:0,2:2:5.94:43,6,0	0/1:1,1:2:0:0,0,0	1/1:0,2:2:3:25,3,0	1/1:5,7:12:21.29:167,21,0	0/1:10,2:12:11.18:11,0,114	0/1:11,3:13:18.95:61,0,19	0/1:2,0:2:0:0,0,0	0/0:2,0:2:2.93:0,3,18	1/1:0,1:1:3:25,3,0	1/1:0,3:3:8.99:76,9,0	0/1:2,0:2:0:0,0,0	0/1:1,0:1:0:0,0,0	1/1:1,0:1:0.47:1,0,0	1/1:4,3:7:2.67:37,3,0	1/1:5,0:3:2.66:5,3,0
chr10	96765005	.	A	ACACTCATT	832.23	PASS	AB=0.793;AC=7;AF=0.130;AN=54;BaseQRankSum=0.112;DP=180;FS=4.704;HRun=0;HaplotypeScore=65.4923;InbreedingCoeff=-0.0321;MQ=77.30;MQ0=6;MQRankSum=-3.165;QD=16.64;ReadPosRankSum=1.964;VQSLOD=1.8534;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:10:26.87:0,27,359	0/0:2,0:2:5.99:0,6,103	0/1:13,0:11:68.09:68,0,575	0/0:10,0:9:15.02:0,15,350	0/1:4,4:6:86.85:177,0,87	0/0:7,0:6:8.94:0,9,131	0/0:7,0:7:21.07:0,21,523	0/0:25,0:24:62.01:0,62,1446	0/0:4,0:4:6.02:0,6,155	0/0:1,0:1:3:0,3,25	1/1:2,1:2:5.95:140,6,0	./.	0/0:7,0:7:20.87:0,21,317	0/0:3,0:3:9.03:0,9,234	0/0:2,0:2:2.96:0,3,19	0/0:2,0:2:3.01:0,3,81	0/1:12,1:13:90.81:91,0,592	0/0:16,0:16:48.06:0,48,1105	0/0:13,0:13:39.09:0,39,1045	0/0:2,0:2:5.93:0,6,40	0/0:1,0:1:3.01:0,3,64	0/0:1,0:1:3.01:0,3,81	0/0:4,0:4:12.04:0,12,275	0/0:2,0:2:3.01:0,3,85	0/0:1,0:1:2.97:0,3,20	0/1:1,1:2:41.63:121,0,42	0/0:8,0:8:20.99:0,21,445	0/1:7,3:8:99:358,0,281
chr10	96765031	.	AAAT	A	818.34	PASS	AC=22;AF=1.000;AN=22;DP=128;FS=0.000;HRun=0;HaplotypeScore=30.1790;InbreedingCoeff=-0.1054;MQ=75.33;MQ0=0;QD=11.37;VQSLOD=2.3428;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:8:2.98:21,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,0:1:2.98:21,3,0	./.	1/1:2,0:3:2.98:21,3,0	1/1:0,0:1:2.98:21,3,0	./.	1/1:12,0:13:2.93:20,3,0	1/1:5,6:11:18.02:215,18,0	1/1:9,2:11:6.02:78,6,0	./.	./.	./.	1/1:2,0:3:2.98:21,3,0	./.	./.	1/1:2,0:3:2.98:21,3,0	1/1:5,4:9:15.05:195,15,0	1/1:0,8:9:21.03:255,21,0
chr10	96765105	.	CGCTGGCACGGTGCCA	C	866.29	PASS	AB=0.909;AC=3;AF=0.054;AN=56;BaseQRankSum=4.391;DP=312;FS=3.772;HRun=0;HaplotypeScore=134.0760;InbreedingCoeff=0.5053;MQ=71.05;MQ0=0;MQRankSum=-2.521;QD=41.25;ReadPosRankSum=0.672;VQSLOD=3.3347;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.24:0,69,4856	0/0:4,0:4:12.04:0,12,888	0/1:9,0:10:41.44:41,0,207	0/0:5,0:4:4.26:0,4,83	0/0:15,0:15:33.10:0,33,2246	0/0:8,0:8:24.08:0,24,1777	0/0:13,0:13:39.13:0,39,2888	0/0:13,0:13:21.07:0,21,1220	0/0:6,0:6:15.05:0,15,1087	0/0:15,0:15:42.14:0,42,2731	0/0:3,0:3:9.03:0,9,588	0/0:5,0:5:15.05:0,15,1019	0/0:7,0:7:21.07:0,21,1536	0/0:16,0:16:48.12:0,48,3201	0/0:8,0:8:21.07:0,21,1538	0/0:9,0:9:24.08:0,24,1505	0/0:22,0:22:63.22:0,63,4645	1/1:4,7:11:21.07:929,21,0	0/0:12,0:12:36.12:0,36,2299	0/0:11,0:11:18.06:0,18,1329	0/0:21,0:21:57.19:0,57,3739	0/0:10,0:10:30.10:0,30,2017	0/0:5,0:5:9.03:0,9,510	0/0:5,0:5:15.05:0,15,1115	0/0:8,0:8:24.08:0,24,1671	0/0:14,0:14:42.14:0,42,3046	0/0:13,0:13:39.13:0,39,2500	0/0:17,0:17:39.10:0,39,2259
chr10	96765350	.	T	TA	882.45	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.063;DP=660;FS=6.350;HRun=7;HaplotypeScore=62.8053;InbreedingCoeff=0.9932;MQ=88.00;MQ0=0;MQRankSum=-3.379;QD=29.41;ReadPosRankSum=0.047;VQSLOD=4.1362;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,117,1123	0/0:7,0:8:20.06:0,20,180	0/0:22,0:22:42.04:0,42,404	0/0:25,0:25:62.90:0,63,579	0/0:16,0:16:39.04:0,39,371	0/0:17,0:17:45.07:0,45,435	0/0:25,0:25:69.09:0,69,660	0/0:30,0:30:84.13:0,84,811	0/0:28,0:28:69.10:0,69,666	0/0:23,0:23:60.09:0,60,576	0/0:13,0:13:36.06:0,36,348	0/0:17,0:17:51.07:0,51,488	0/0:29,0:29:87.10:0,87,831	0/0:24,0:24:63.08:0,63,602	0/0:28,0:28:72.09:0,72,689	0/0:23,0:23:60.09:0,60,579	0/0:43,0:43:99:0,117,1123	1/1:2,28:30:81.25:977,81,0	0/0:11,0:11:30.05:0,30,290	0/0:13,0:13:33.05:0,33,319	0/0:40,0:40:99:0,99,947	0/0:11,0:11:30.03:0,30,284	0/0:19,0:19:57.01:0,57,538	0/0:28,0:28:78.11:0,78,747	0/0:21,0:21:63.09:0,63,603	0/0:29,0:29:81.10:0,81,769	0/0:25,0:25:69.09:0,69,660	0/0:16,0:16:33.05:0,33,319
chr10	96766519	.	A	AT	11616.63	PASS	AB=0.646;AC=48;AF=0.857;AN=56;BaseQRankSum=-7.493;DP=557;FS=3.203;HRun=10;HaplotypeScore=55.5410;InbreedingCoeff=0.1801;MQ=75.70;MQ0=0;MQRankSum=-3.035;QD=21.39;ReadPosRankSum=4.505;VQSLOD=5.6792;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,31:36:37.94:813,38,0	0/1:2,7:9:6.55:142,0,7	0/0:14,0:14:23.93:0,24,194	0/1:18,0:18:13.14:13,0,120	0/1:5,14:20:1.36:371,0,1	1/1:5,18:23:48.12:512,48,0	1/1:1,15:17:41.94:430,42,0	1/1:7,23:30:22.87:646,23,0	1/1:1,18:19:42.11:448,42,0	1/1:4,19:23:57.12:598,57,0	1/1:4,15:19:42.11:448,42,0	1/1:2,14:16:39.10:416,39,0	1/1:4,16:20:36.09:384,36,0	1/1:2,20:22:60.13:628,60,0	1/1:5,22:27:38.51:615,39,0	1/1:5,19:24:42.75:476,43,0	1/1:3,19:22:57.14:608,57,0	1/1:4,17:21:29.45:507,29,0	1/1:6,15:21:20.09:395,20,0	1/1:5,16:21:4.95:451,5,0	0/1:4,7:11:3.59:170,0,4	1/1:5,24:30:35.33:553,35,0	0/1:4,15:19:10.19:313,0,10	0/1:4,12:16:13.51:283,0,14	1/1:3,11:14:30.08:320,30,0	1/1:6,15:21:23.47:455,23,0	1/1:3,12:15:36.06:367,36,0	1/1:0,9:9:24.06:255,24,0
chr10	96766730	.	CGTGTGT	C	2007.67	PASS	AB=0.802;AC=28;AF=0.538;AN=52;BaseQRankSum=1.834;DP=499;FS=6.044;HRun=0;HaplotypeScore=123.0483;InbreedingCoeff=0.6104;MQ=70.63;MQ0=9;MQRankSum=-4.296;QD=8.73;ReadPosRankSum=-0.650;VQSLOD=2.1150;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,1:28:9.46:105,9,0	0/0:3,0:4:6.02:0,6,87	./.	./.	0/0:9,0:18:23.72:0,24,296	0/1:10,1:11:29.37:55,0,29	1/1:16,7:23:8.89:182,9,0	0/0:18,0:17:5.93:0,6,40	1/1:10,2:12:6.02:121,6,0	0/0:8,0:9:6.02:0,6,82	0/0:13,0:13:15.04:0,15,199	1/1:14,2:17:9.03:163,9,0	1/1:11,3:14:15.05:303,15,0	1/1:8,7:15:21.07:425,21,0	0/0:16,0:21:38.22:0,38,440	1/1:11,4:15:15.05:294,15,0	0/0:17,0:25:37.45:0,37,482	0/0:20,0:22:36.07:0,36,720	1/1:10,1:11:3.01:61,3,0	1/1:10,0:12:2.66:5,3,0	0/0:28,0:28:6.39:0,6,75	1/1:6,0:15:21.07:293,21,0	1/1:10,0:11:6.56:80,7,0	1/1:26,2:28:6.22:79,6,0	0/1:6,0:11:20.82:21,0,237	0/0:15,0:17:18.75:0,19,249	0/0:15,0:18:2.98:0,3,30	1/1:3,0:6:2.66:5,3,0
chr10	96767017	.	T	TA	7245.66	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-12.747;DP=467;FS=12.868;HRun=9;HaplotypeScore=53.9705;InbreedingCoeff=0.9563;MQ=73.47;MQ0=1;MQRankSum=0.650;QD=25.07;ReadPosRankSum=3.705;VQSLOD=4.6599;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:86.95:0,87,749	1/1:0,7:7:21.06:232,21,0	0/0:14,0:12:7.82:0,8,47	0/0:13,0:11:11.97:0,12,90	1/1:1,24:25:60.16:664,60,0	1/1:3,13:16:10.25:339,10,0	1/1:2,4:7:11.87:114,12,0	0/0:24,0:24:44.95:0,45,383	1/1:4,16:20:42.09:454,42,0	1/1:2,13:15:39.11:431,39,0	1/1:1,14:15:39.10:429,39,0	1/1:1,13:15:35.93:379,36,0	1/1:3,12:15:30.08:331,30,0	1/1:4,12:16:33.09:365,33,0	1/1:3,18:21:51.14:564,51,0	0/0:13,0:13:23.97:0,24,208	1/1:2,35:37:99:1095,99,0	0/0:17,1:19:16.79:0,17,356	0/0:22,0:22:35.62:0,36,362	0/0:13,0:13:29.97:0,30,252	0/0:10,0:10:29.98:0,30,255	1/1:2,8:10:21.06:232,21,0	1/1:2,11:13:27.07:299,27,0	1/1:3,14:17:33.09:365,33,0	1/1:3,21:25:28.23:538,28,0	1/1:3,12:15:39.02:415,39,0	0/0:16,0:16:44.97:0,45,384	0/0:3,0:3:6.47:0,6,53
chr10	96767160	.	G	GAA	8210.58	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-5.177;DP=572;FS=2.899;HRun=13;HaplotypeScore=92.6481;InbreedingCoeff=0.8222;MQ=61.49;MQ0=7;MQRankSum=2.046;QD=18.79;ReadPosRankSum=-1.098;VQSLOD=4.1380;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:43:82.53:0,83,822	1/1:2,0:5:2.50:9,2,0	0/0:27,0:11:7.94:0,8,106	0/0:19,0:9:10.98:0,11,81	1/1:3,18:23:61.87:660,62,0	1/1:0,14:18:38.08:447,38,0	1/1:6,16:26:32.57:375,33,0	1/1:10,10:20:33.32:452,33,0	1/1:3,15:22:35.08:400,35,0	1/1:5,12:18:38.99:437,39,0	1/1:2,8:13:29.52:336,30,0	1/1:6,16:24:27.56:365,28,0	1/1:6,11:17:18.06:245,18,0	1/1:5,13:18:3.66:340,4,0	1/1:4,14:20:35.56:424,36,0	0/0:15,0:17:26.55:0,27,267	1/1:2,24:31:61.66:757,62,0	0/0:4,0:28:60.54:0,61,273	1/1:12,2:24:38.85:309,39,0	1/1:3,12:17:40.58:426,41,0	1/1:6,7:16:1.59:225,2,0	1/1:1,12:14:29.58:370,30,0	1/1:1,7:15:14.44:120,14,0	1/1:7,22:30:41.62:538,42,0	1/1:6,4:13:21.65:243,22,0	1/1:10,14:26:24.51:572,25,0	1/1:8,2:18:11.51:110,12,0	1/1:3,1:5:5.51:49,6,0
chr10	96768744	.	AAAAAC	A	1149.60	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.753;DP=541;FS=0.000;HRun=0;HaplotypeScore=99.5111;InbreedingCoeff=0.9644;MQ=71.60;MQ0=2;MQRankSum=-2.631;QD=32.85;ReadPosRankSum=2.174;VQSLOD=3.3938;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:20:36.12:705,36,0	0/0:7,0:7:18.06:0,18,493	0/0:34,0:21:40.47:0,40,774	0/0:30,0:14:31.98:0,32,441	0/0:30,0:30:84.26:0,84,2178	0/0:16,0:16:45.15:0,45,1146	0/0:15,0:15:42.12:0,42,1056	0/0:19,0:19:34.36:0,34,907	0/0:20,0:20:45.14:0,45,1108	0/0:22,0:22:51.17:0,51,1442	0/0:21,0:21:54.17:0,54,1384	0/0:17,0:17:39.11:0,39,990	0/0:13,0:13:33.11:0,33,925	0/0:13,0:13:33.11:0,33,845	0/0:22,0:22:51.16:0,51,1316	1/1:4,11:15:30.10:566,30,0	0/0:32,0:30:78.27:0,78,2239	0/0:30,0:30:87.22:0,87,2183	0/0:16,0:16:39.12:0,39,967	0/0:19,0:19:51.18:0,51,1474	0/0:9,0:9:24.08:0,24,649	0/0:15,0:15:39.13:0,39,1091	0/0:18,0:18:45.14:0,45,1138	0/0:3,0:3:9.03:0,9,266	0/0:18,0:18:42.14:0,42,1166	0/0:28,0:28:75.25:0,75,1972	0/0:28,0:27:66.22:0,66,1751	0/0:10,0:10:27.09:0,27,728
chr10	96768939	.	GGAA	G	1387.53	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.354;DP=629;FS=1.569;HRun=0;HaplotypeScore=87.8231;InbreedingCoeff=0.9683;MQ=82.06;MQ0=0;MQRankSum=-2.684;QD=44.76;ReadPosRankSum=1.421;VQSLOD=5.3303;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,148,3572	0/0:4,0:4:12.04:0,12,296	0/0:16,0:16:45.07:0,45,995	0/0:23,0:22:62.24:0,62,1343	0/0:24,0:24:72.25:0,72,1738	0/0:16,0:16:48.16:0,48,1142	0/0:23,0:23:69.22:0,69,1596	0/0:17,0:17:51.18:0,51,1241	0/0:16,0:16:48.16:0,48,1182	0/0:15,0:15:45.15:0,45,1084	0/0:21,0:21:63.20:0,63,1452	0/0:26,0:26:78.27:0,78,1915	0/0:22,0:22:66.23:0,66,1587	0/0:16,0:16:48.16:0,48,1128	0/0:17,0:17:51.18:0,51,1257	0/0:23,0:23:69.24:0,69,1630	0/0:37,0:37:99:0,108,2662	1/1:0,31:31:81.28:1482,81,0	0/0:20,0:20:60.21:0,60,1415	0/0:25,0:25:75.26:0,75,1833	0/0:32,0:32:96.30:0,96,2174	0/0:15,0:15:45.15:0,45,1085	0/0:16,0:16:45.14:0,45,1025	0/0:35,0:35:99:0,102,2441	0/0:22,0:22:66.23:0,66,1605	0/0:33,0:33:99:0,99,2262	0/0:26,0:26:78.27:0,78,1902	0/0:8,0:8:24.08:0,24,560
chr10	96769419	.	CT	C	7716.07	PASS	AB=0.900;AC=47;AF=0.839;AN=56;BaseQRankSum=-4.791;DP=476;FS=6.413;HRun=11;HaplotypeScore=54.9245;InbreedingCoeff=0.8111;MQ=64.53;MQ0=2;MQRankSum=-1.103;QD=18.24;ReadPosRankSum=0.547;VQSLOD=5.8484;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:21:42.61:0,43,213	1/1:1,10:11:7.17:221,7,0	0/1:8,1:7:12.65:13,0,69	0/0:6,0:5:7.04:0,7,46	1/1:5,32:37:74.30:593,74,0	1/1:3,24:27:71.80:583,72,0	1/1:3,11:14:29.95:246,30,0	1/1:8,33:43:93.39:730,93,0	1/1:1,9:10:23.97:197,24,0	1/1:2,25:26:71.88:588,72,0	1/1:1,20:23:63.91:496,64,0	1/1:4,8:12:17.97:148,18,0	1/1:0,9:9:23.97:197,24,0	1/1:2,8:10:17.98:148,18,0	1/1:2,11:14:18.57:232,19,0	0/0:3,0:10:11.36:0,11,57	1/1:2,19:21:47.94:394,48,0	0/0:16,0:14:39.08:0,39,406	1/1:3,12:15:35.88:286,36,0	1/1:3,14:17:38.89:315,39,0	1/1:0,9:9:23.97:197,24,0	1/1:4,6:10:17.95:148,18,0	1/1:3,14:17:38.95:320,39,0	1/1:1,8:9:17.91:140,18,0	1/1:2,17:19:44.93:369,45,0	1/1:7,22:29:62.82:510,63,0	1/1:3,18:21:53.93:443,54,0	1/1:0,9:10:26.01:203,26,0
chr10	96773240	.	GA	G	4019.35	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.562;DP=822;FS=3.324;HRun=3;HaplotypeScore=94.1790;InbreedingCoeff=0.9849;MQ=67.79;MQ0=2;MQRankSum=-0.264;QD=32.15;ReadPosRankSum=-1.427;VQSLOD=3.0951;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,147,2075	0/0:5,0:5:15.05:0,15,216	0/0:34,0:28:73.47:0,73,970	0/0:42,1:28:65.91:0,66,857	0/0:17,0:17:48.12:0,48,668	0/0:20,0:20:56.39:0,56,766	0/0:39,0:39:99:0,102,1431	1/1:1,22:23:63.20:780,63,0	0/0:26,0:26:78.26:0,78,1111	0/0:35,0:35:96.32:0,96,1376	0/0:18,0:18:54.17:0,54,755	0/0:32,0:32:93.31:0,93,1330	0/0:25,0:25:75.25:0,75,1079	0/0:35,0:35:99:0,105,1485	0/0:38,0:38:99:0,111,1597	0/0:44,0:44:99:0,132,1895	0/0:45,0:45:99:0,129,1790	0/0:44,0:44:99:0,125,1773	1/1:1,21:22:60.17:728,60,0	1/1:2,16:18:48.11:577,48,0	1/1:1,36:37:96.30:1190,96,0	0/0:25,0:25:72.24:0,72,1036	0/0:23,0:23:66.20:0,66,912	0/0:56,0:55:99:0,163,2328	0/0:17,0:17:48.16:0,48,691	0/0:24,0:24:72.23:0,72,1019	1/1:1,20:21:51.16:632,51,0	1/1:0,4:4:9.03:112,9,0
chr10	96773389	.	CGG	C	572.27	PASS	AB=0.641;AC=2;AF=0.036;AN=56;BaseQRankSum=5.274;DP=621;FS=9.530;HRun=2;HaplotypeScore=138.1760;InbreedingCoeff=-0.0364;MQ=55.81;MQ0=9;MQRankSum=-3.186;QD=11.01;ReadPosRankSum=3.509;VQSLOD=0.1704;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,14:28:43.85:338,0,44	0/0:8,0:8:24.08:0,24,444	0/0:31,0:12:20.83:0,21,360	0/0:29,0:8:15.05:0,15,258	0/0:17,0:17:48.16:0,48,878	0/0:26,0:26:63.18:0,63,1101	0/0:28,0:28:81.70:0,82,1438	0/0:14,0:14:30.10:0,30,554	0/0:18,0:18:54.18:0,54,1001	0/0:28,0:28:75.26:0,75,1361	0/0:17,0:17:45.15:0,45,853	0/0:27,0:27:72.22:0,72,1316	0/0:22,0:22:54.14:0,54,979	0/0:30,0:30:81.28:0,81,1547	0/0:25,0:25:69.24:0,69,1250	0/1:9,15:24:28.23:323,0,28	0/0:28,0:28:60.18:0,60,1101	0/0:25,0:25:69.17:0,69,1284	0/0:13,0:12:36.10:0,36,611	0/0:17,0:17:51.14:0,51,868	0/0:32,0:32:84.29:0,84,1554	0/0:21,0:21:63.22:0,63,1160	0/0:24,0:24:58.14:0,58,1071	0/0:24,0:24:60.20:0,60,1091	0/0:12,0:12:33.11:0,33,634	0/0:25,0:24:72.25:0,72,1360	0/0:16,0:16:48.16:0,48,913	0/0:12,0:12:36.12:0,36,655
chr10	96773392	.	AGG	A	456.12	PASS	AB=0.638;AC=2;AF=0.036;AN=56;BaseQRankSum=5.551;DP=624;FS=5.935;HRun=3;HaplotypeScore=140.0038;InbreedingCoeff=-0.0378;MQ=53.90;MQ0=11;MQRankSum=-3.759;QD=8.94;ReadPosRankSum=4.480;VQSLOD=0.5120;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,14:26:65.33:270,0,65	0/0:9,0:9:27.07:0,27,458	0/0:28,0:9:20.79:0,21,362	0/0:28,0:8:15:0,15,250	0/0:17,0:17:48.16:0,48,908	0/0:23,0:23:54.18:0,54,1022	0/0:26,0:26:75.73:0,76,1416	0/0:15,0:15:33.09:0,33,564	0/0:18,0:18:54.19:0,54,1024	0/0:29,0:29:78.26:0,78,1413	0/0:17,0:17:45.15:0,45,865	0/0:27,0:27:69.22:0,69,1290	0/0:24,0:24:60.17:0,60,1068	0/0:30,0:30:81.28:0,81,1559	0/0:29,0:29:81.21:0,81,1417	0/1:10,15:25:59.32:275,0,59	0/0:27,0:27:54.19:0,54,1042	0/0:24,0:24:63.20:0,63,1165	0/0:15,0:13:39.08:0,39,665	0/0:17,0:17:51.17:0,51,950	0/0:31,0:31:81.25:0,81,1511	0/0:23,0:23:66.21:0,66,1196	0/0:24,0:24:61.10:0,61,1073	0/0:23,0:23:57.20:0,57,1084	0/0:15,0:15:36.12:0,36,694	0/0:25,0:24:72.24:0,72,1356	0/0:16,0:16:48.16:0,48,922	0/0:13,0:13:39.09:0,39,711
chr10	96773419	.	G	GAGGA	12044.11	PASS	AB=0.595;AC=37;AF=0.661;AN=56;BaseQRankSum=0.399;DP=657;FS=0.000;HRun=0;HaplotypeScore=121.9348;InbreedingCoeff=0.8555;MQ=55.35;MQ0=13;MQRankSum=0.109;QD=26.47;ReadPosRankSum=3.774;VQSLOD=4.5862;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,16:34:14.66:381,15,0	1/1:3,4:7:12:239,12,0	0/0:18,0:6:6:0,6,72	0/0:29,0:11:12.04:0,12,177	1/1:7,9:17:23.96:471,24,0	1/1:9,19:29:15.05:360,15,0	1/1:27,4:31:35.99:541,36,0	0/0:33,0:33:58.25:0,58,775	1/1:7,15:24:33.11:798,33,0	1/1:13,18:30:2.27:945,2,0	1/1:3,11:14:23.97:461,24,0	1/1:9,15:25:33.11:801,33,0	0/1:7,13:22:63.19:618,0,63	1/1:9,13:24:33.11:796,33,0	1/1:7,17:30:45.10:910,45,0	1/1:23,2:25:48.01:765,48,0	1/1:12,16:28:18.02:436,18,0	0/0:17,0:17:24.05:0,24,362	0/0:18,0:16:27.05:0,27,410	0/0:22,0:22:54.18:0,54,872	0/0:32,0:32:38.23:0,38,856	1/1:6,23:31:57.14:1269,57,0	1/1:10,11:21:30.10:723,30,0	1/1:11,13:27:15.52:365,16,0	1/1:2,9:12:21.07:499,21,0	1/1:12,11:23:33.08:664,33,0	0/0:14,0:14:24.04:0,24,354	0/0:19,0:19:42.12:0,42,648
chr10	96773685	.	C	CT	503.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.936;DP=556;FS=0.887;HRun=9;HaplotypeScore=58.6554;InbreedingCoeff=0.9847;MQ=67.93;MQ0=6;MQRankSum=1.447;QD=23.98;ReadPosRankSum=2.081;VQSLOD=4.5218;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,111,960	0/0:8,0:8:21:0,21,182	0/0:30,0:14:32.95:0,33,276	0/0:23,0:11:22.49:0,22,171	0/0:23,0:24:61.99:0,62,522	0/0:18,0:18:47.99:0,48,417	0/0:15,0:14:32.36:0,32,268	0/0:37,0:37:99:0,102,878	0/0:13,0:13:35.97:0,36,309	0/0:22,0:22:35.98:0,36,313	0/0:10,0:10:20.98:0,21,182	0/0:15,0:15:35.96:0,36,306	0/0:13,0:13:32.99:0,33,286	0/0:17,0:17:47.98:0,48,417	0/0:19,0:19:53.99:0,54,469	0/0:16,0:16:38.98:0,39,338	0/0:37,0:37:98.95:0,99,854	1/1:3,18:21:54.62:598,55,0	0/0:19,0:19:44.97:0,45,390	0/0:14,0:14:26.35:0,26,216	0/0:14,0:14:35.99:0,36,313	0/0:14,0:14:38.99:0,39,339	0/0:14,0:14:32.98:0,33,286	0/0:16,0:16:26.56:0,27,230	0/0:13,0:13:32.99:0,33,286	0/0:30,0:30:74.98:0,75,651	0/0:17,0:17:50.99:0,51,442	0/0:25,0:25:71.98:0,72,625
chr10	96773838	.	G	GGT	882.12	PASS	AB=0.945;AC=18;AF=0.333;AN=54;BaseQRankSum=1.989;DP=449;FS=12.218;HRun=0;HaplotypeScore=67.9658;InbreedingCoeff=0.5537;MQ=54.90;MQ0=7;MQRankSum=-1.175;QD=5.01;ReadPosRankSum=-2.269;VQSLOD=0.6424;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,15:32:24.08:356,24,0	0/0:3,0:3:3.01:0,3,34	0/0:28,0:11:1.49:0,1,6	0/0:20,0:7:2.67:0,3,20	0/0:9,0:12:17.72:0,18,163	0/0:16,0:16:13.59:0,14,138	0/1:16,0:17:0.45:0,0,177	0/1:27,0:27:11.12:77,0,11	0/1:3,1:6:33.64:34,0,80	0/0:17,0:19:23.62:0,24,205	0/0:8,0:10:17.55:0,18,143	0/0:14,0:16:32.88:0,33,337	0/0:10,0:11:26.87:0,27,269	0/1:10,1:12:21.55:22,0,178	0/0:8,0:9:23.90:0,24,249	1/1:3,5:9:12.04:183,12,0	0/0:35,0:38:70.58:0,71,758	1/1:21,0:21:19.11:138,19,0	1/1:19,0:20:6:51,6,0	1/1:3,0:6:2.74:12,3,0	1/1:15,0:14:9:78,9,0	0/0:12,0:12:24.07:0,24,269	0/0:12,0:12:24.05:0,24,259	0/0:20,0:21:30.80:0,31,319	0/0:16,0:15:24.06:0,24,266	0/0:21,0:24:25.58:0,26,235	1/1:5,0:7:12:109,12,0	./.
chr10	96774009	.	T	TG	122.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.169;DP=520;FS=4.222;HRun=4;HaplotypeScore=111.7624;InbreedingCoeff=0.6422;MQ=69.96;MQ0=16;MQRankSum=-2.242;QD=9.42;ReadPosRankSum=-0.231;VQSLOD=0.6061;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:14.29:0,14,119	0/0:7,0:7:13.50:0,14,65	0/0:69,4:22:37.05:0,37,291	0/0:85,1:23:16.83:0,17,246	0/0:23,0:22:26.16:0,26,157	0/0:13,0:13:18.66:0,19,99	0/0:13,0:13:27.03:0,27,141	0/0:30,1:30:6.61:0,7,227	0/0:8,0:8:13.52:0,14,77	0/0:19,1:19:20.31:0,20,154	0/0:13,0:14:29.49:0,29,174	0/0:14,0:14:26.70:0,27,171	0/0:8,0:8:14.49:0,14,83	0/0:11,0:11:14.49:0,14,104	0/0:11,0:11:24.23:0,24,133	0/0:6,0:5:3.88:0,4,27	0/0:20,0:20:32.64:0,33,186	1/1:11,2:13:30.04:217,30,0	0/0:25,0:24:40.44:0,40,311	0/0:17,0:17:13.08:0,13,103	0/0:8,0:8:14.93:0,15,120	0/0:6,0:5:8.64:0,9,51	0/0:14,0:14:14.33:0,14,108	0/0:16,0:16:22.12:0,22,130	0/0:12,0:12:24.97:0,25,145	0/0:14,0:14:26.83:0,27,200	0/0:7,0:7:11.92:0,12,91	0/0:12,0:12:25.42:0,25,177
chr10	96774013	.	G	GTT	3380.35	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-0.079;DP=579;FS=0.695;HRun=15;HaplotypeScore=132.8860;InbreedingCoeff=0.4502;MQ=62.92;MQ0=23;MQRankSum=0.507;QD=7.04;ReadPosRankSum=-1.811;VQSLOD=0.7337;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,1:20:37.33:305,37,0	1/1:8,0:8:17.42:130,17,0	0/0:86,0:20:12.08:0,12,158	0/1:97,0:22:17.47:17,0,141	1/1:23,0:22:36.02:184,36,0	1/1:14,0:14:25.04:169,25,0	1/1:12,0:12:15.70:164,16,0	1/1:30,1:31:25.99:196,26,0	1/1:11,0:11:1.55:50,2,0	1/1:23,0:21:35.61:252,36,0	1/1:13,0:14:17.89:97,18,0	1/1:15,0:15:17.76:144,18,0	1/1:11,0:11:21.43:144,21,0	1/1:11,0:11:1.40:40,1,0	1/1:11,0:11:16.60:106,17,0	1/1:8,0:7:9.08:75,9,0	1/1:18,1:19:31.96:175,32,0	0/0:13,0:13:6.90:0,7,42	1/1:24,2:26:27.03:240,27,0	1/1:15,1:19:22.77:171,23,0	1/1:8,1:9:5.45:40,5,0	1/1:7,0:6:5.99:19,6,0	1/1:14,0:14:21.73:146,22,0	1/1:15,0:15:4.42:62,4,0	1/1:15,0:15:14.80:105,15,0	1/1:17,0:16:19.22:179,19,0	1/1:5,0:6:3:26,3,0	1/1:15,1:17:21.42:144,21,0
chr10	96774028	.	TGGG	T	8456.96	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.575;DP=560;FS=3.250;HRun=5;HaplotypeScore=113.7601;InbreedingCoeff=0.8969;MQ=61.42;MQ0=29;MQRankSum=-3.119;QD=25.47;ReadPosRankSum=7.145;VQSLOD=0.9834;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:10,6:18:36.44:434,36,0	1/1:5,1:9:21.01:241,21,0	0/0:111,0:24:58.39:0,58,933	0/0:114,0:26:32.80:0,33,525	1/1:12,2:21:52.76:563,53,0	1/1:7,1:13:29.57:349,30,0	1/1:9,3:14:35.28:449,35,0	1/1:13,4:20:44.79:442,45,0	1/1:6,3:10:17.73:214,18,0	1/1:9,3:17:29.70:374,30,0	1/1:8,1:12:32.19:325,32,0	1/1:10,2:14:38.54:418,39,0	1/1:7,2:11:25.85:316,26,0	1/1:2,3:9:25.79:316,26,0	1/1:9,4:16:47.43:616,47,0	1/1:3,1:6:12.01:153,12,0	1/1:6,3:15:41.61:512,42,0	1/1:5,4:9:21.05:284,21,0	1/1:11,1:14:29.67:296,30,0	1/1:12,2:14:26.02:212,26,0	1/1:3,2:5:11.48:119,11,0	1/1:3,0:4:5.86:37,6,0	1/1:5,0:9:23.26:236,23,0	1/1:6,1:14:27.06:345,27,0	1/1:9,1:15:26.71:269,27,0	1/1:8,0:12:27.05:342,27,0	1/1:2,4:7:14.84:191,15,0	1/1:7,4:13:33.01:405,33,0
chr10	96774030	.	GGGGC	G	9299.82	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.304;DP=547;FS=6.758;HRun=0;HaplotypeScore=114.4608;InbreedingCoeff=0.8967;MQ=60.67;MQ0=27;MQRankSum=-3.391;QD=28.70;ReadPosRankSum=5.684;VQSLOD=4.2648;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,3:16:38.10:454,38,0	1/1:8,0:8:21.07:292,21,0	0/0:111,0:24:46.51:0,47,1101	0/0:112,0:24:47.69:0,48,612	1/1:23,0:21:53.35:575,53,0	1/1:12,0:12:25.03:319,25,0	1/1:14,0:14:36.11:447,36,0	1/1:19,1:19:47.63:481,48,0	1/1:10,0:10:18.03:267,18,0	1/1:16,1:15:18.68:372,19,0	1/1:11,0:11:32.74:377,33,0	1/1:14,0:14:37.78:441,38,0	1/1:11,0:12:27.70:366,28,0	1/1:9,0:9:25.81:334,26,0	1/1:17,0:17:50.56:638,51,0	1/1:5,2:6:11.91:164,12,0	1/1:14,0:14:41.15:533,41,0	1/1:7,2:9:24.06:369,24,0	1/1:14,0:14:27:320,27,0	1/1:10,5:14:31.02:293,31,0	1/1:5,0:5:11.66:141,12,0	1/1:4,1:4:5.88:43,6,0	1/1:10,0:10:27.55:314,28,0	1/1:12,2:14:27:388,27,0	1/1:15,0:15:26.23:305,26,0	1/1:11,0:10:27.64:362,28,0	1/1:7,0:7:15.02:232,15,0	1/1:11,2:13:33.07:471,33,0
chr10	96774031	.	GGGC	G	7732.19	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.602;DP=541;FS=4.364;HRun=0;HaplotypeScore=112.2722;InbreedingCoeff=0.8970;MQ=58.98;MQ0=27;MQRankSum=-2.675;QD=24.01;ReadPosRankSum=5.981;VQSLOD=4.4033;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:16:36.06:346,36,0	1/1:9,0:9:21.06:261,21,0	0/0:108,0:23:41.99:0,42,781	0/0:111,0:23:38.58:0,39,459	1/1:22,1:21:53.23:528,53,0	1/1:12,0:12:29.51:319,30,0	1/1:11,2:13:35.49:381,35,0	1/1:21,0:20:49.21:365,49,0	1/1:5,5:10:17.92:208,18,0	1/1:16,0:14:20.77:339,21,0	1/1:10,1:11:32.49:338,32,0	1/1:13,1:14:38.18:376,38,0	1/1:10,0:10:25.27:273,25,0	1/1:9,0:9:25.80:282,26,0	1/1:16,1:17:48.08:518,48,0	1/1:7,0:6:11.93:131,12,0	1/1:13,1:14:40.27:490,40,0	1/1:11,0:11:21.89:234,22,0	1/1:13,0:13:29.43:239,29,0	1/1:15,0:14:30.80:236,31,0	1/1:5,0:5:11.62:108,12,0	1/1:5,0:4:5.86:38,6,0	1/1:10,0:10:27.45:292,27,0	1/1:14,0:14:27.01:318,27,0	1/1:8,1:15:26.80:294,27,0	1/1:10,0:9:27.05:313,27,0	1/1:6,1:7:14.83:151,15,0	1/1:13,0:13:32.99:352,33,0
chr10	96774032	.	GGC	G	4992.70	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.638;DP=533;FS=4.872;HRun=0;HaplotypeScore=115.5289;InbreedingCoeff=0.8822;MQ=58.52;MQ0=26;MQRankSum=-3.034;QD=15.32;ReadPosRankSum=4.282;VQSLOD=4.7860;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:16:33.88:188,34,0	1/1:8,1:9:20.89:193,21,0	0/0:104,1:23:30.58:0,31,515	0/0:101,0:20:24.73:0,25,196	1/1:19,4:21:49.85:356,50,0	1/1:11,1:12:28.03:246,28,0	1/1:13,1:14:34.97:236,35,0	1/1:21,1:21:45.95:234,46,0	1/1:10,0:10:17.28:134,17,0	1/1:14,1:13:17.51:254,18,0	1/1:11,0:11:30.47:223,30,0	1/1:13,1:14:37.24:294,37,0	1/1:10,0:11:21.25:136,21,0	1/1:9,0:9:25.16:177,25,0	1/1:16,1:17:42.40:302,42,0	1/1:7,0:6:11.43:82,11,0	1/1:14,0:14:36.17:302,36,0	1/1:12,0:12:19.81:128,20,0	1/1:13,0:13:25.42:144,25,0	1/1:15,0:14:29.31:148,29,0	1/1:5,0:5:10.59:55,11,0	1/1:3,2:4:5.70:28,6,0	1/1:8,1:10:26.18:235,26,0	1/1:14,1:15:27.02:188,27,0	1/1:14,1:15:26.51:221,27,0	1/1:10,0:9:25.10:221,25,0	1/1:7,0:7:13.90:80,14,0	1/1:13,0:13:31.67:188,32,0
chr10	96774033	.	GC	G	2077.55	PASS	AB=0.954;AC=54;AF=0.964;AN=56;BaseQRankSum=-0.410;DP=532;FS=11.362;HRun=1;HaplotypeScore=118.6614;InbreedingCoeff=0.0461;MQ=57.89;MQ0=25;MQRankSum=-4.161;QD=3.91;ReadPosRankSum=3.313;VQSLOD=-0.5624;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:16:18.20:59,18,0	1/1:9,0:9:18.75:124,19,0	0/1:96,6:24:8.60:9,0,251	0/1:95,3:18:15.22:15,0,67	1/1:22,1:21:38.93:180,39,0	1/1:12,0:12:9.08:76,9,0	1/1:14,0:14:27.27:117,27,0	1/1:22,0:21:24.42:105,24,0	1/1:10,0:10:15.05:60,15,0	1/1:15,0:13:12.54:86,13,0	1/1:11,0:11:22.40:121,22,0	1/1:13,1:14:28.77:136,29,0	1/1:11,0:11:13.56:61,14,0	1/1:10,0:10:19.21:70,19,0	1/1:17,0:17:23.21:103,23,0	1/1:8,0:7:7.79:31,8,0	1/1:15,0:15:18.31:101,18,0	1/1:12,0:12:14.31:52,14,0	1/1:13,0:13:17.69:76,18,0	1/1:15,0:14:20.14:75,20,0	1/1:5,0:5:5.25:17,5,0	1/1:5,0:4:5.44:24,5,0	1/1:10,0:10:18.73:104,19,0	1/1:15,0:15:22.17:102,22,0	1/1:14,1:15:23.39:103,23,0	1/1:10,0:9:13.83:61,14,0	1/1:8,0:8:9.54:33,10,0	1/1:13,0:13:22.83:79,23,0
chr10	96774034	.	CT	C	2821.59	PASS	AB=0.816;AC=47;AF=0.839;AN=56;BaseQRankSum=-4.326;DP=533;FS=31.998;HRun=11;HaplotypeScore=115.4192;InbreedingCoeff=-0.0380;MQ=56.01;MQ0=25;MQRankSum=-1.977;QD=5.34;ReadPosRankSum=2.646;VQSLOD=-0.0538;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,5:18:4.96:107,0,5	1/1:4,5:9:11.57:83,12,0	0/1:98,1:23:19.62:20,0,92	0/1:94,1:17:6.48:6,0,64	1/1:14,8:21:16.91:140,17,0	0/1:6,6:12:12.83:97,0,13	1/1:8,4:14:21.08:143,21,0	1/1:13,8:21:11.19:165,11,0	1/1:6,4:10:13.24:86,13,0	0/1:10,5:14:8.87:81,0,9	1/1:5,6:11:17.79:135,18,0	1/1:8,5:14:13.58:102,14,0	1/1:6,5:11:25.80:176,26,0	1/1:5,5:10:17.78:131,18,0	1/1:7,9:17:28.07:217,28,0	1/1:6,2:7:5.52:47,6,0	1/1:6,9:15:14.13:164,14,0	1/1:5,7:12:9.89:85,10,0	0/1:9,4:13:25.65:76,0,26	1/1:12,3:14:17.15:136,17,0	1/1:0,5:5:10.67:93,11,0	0/0:5,0:4:0.47:0,0,1	0/1:8,2:11:9.79:59,0,10	1/1:11,5:16:16.91:128,17,0	1/1:10,4:15:15.98:107,16,0	1/1:3,7:9:20.78:167,21,0	1/1:3,4:8:11.93:90,12,0	1/1:8,5:13:4.93:108,5,0
chr10	96774190	.	CCAGATTTTAAAAATA	C	6790.71	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.486;DP=556;FS=16.679;HRun=0;HaplotypeScore=224.2445;InbreedingCoeff=0.9861;MQ=89.15;MQ0=0;MQRankSum=-9.014;QD=70.01;ReadPosRankSum=0.643;VQSLOD=3.2835;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.30:0,87,5936	0/0:13,0:13:36.12:0,36,2549	0/0:25,0:25:69.70:0,70,3457	0/0:21,0:21:59.85:0,60,2841	0/0:18,0:18:51.11:0,51,3441	0/0:25,0:25:75.26:0,75,4981	0/0:14,0:14:42.14:0,42,2809	1/1:2,27:29:80.88:2210,81,0	0/0:17,0:17:48.16:0,48,3559	0/0:19,0:19:54.19:0,54,3851	0/0:15,0:15:45.15:0,45,3021	0/0:24,0:24:72.21:0,72,4877	0/0:15,0:15:45.15:0,45,3357	0/0:20,0:20:60.19:0,60,4157	0/0:33,0:33:99:0,99,6570	0/0:29,0:29:84.25:0,84,5710	0/0:24,0:24:66.23:0,66,4500	0/0:16,0:16:48.16:0,48,3306	1/1:1,8:9:21.03:766,21,0	1/1:0,15:15:24.08:885,24,0	1/1:0,13:13:9.03:271,9,0	0/0:12,0:12:36.12:0,36,2420	0/0:25,0:25:72.23:0,72,5016	0/0:30,0:30:87.28:0,87,5717	0/0:10,0:10:27.09:0,27,1976	0/0:23,0:23:69.24:0,69,5062	1/1:2,15:17:23.82:1079,24,0	1/1:0,14:14:36.12:1580,36,0
chr10	96775322	.	GC	G	1180.90	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.464;DP=470;FS=9.210;HRun=4;HaplotypeScore=43.2418;InbreedingCoeff=0.9574;MQ=75.32;MQ0=0;MQRankSum=-0.683;QD=28.80;ReadPosRankSum=1.828;VQSLOD=2.6734;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:99:1187,99,0	0/0:7,0:7:21.07:0,21,286	0/0:7,0:7:18.02:0,18,214	0/0:11,0:11:26.87:0,27,360	0/0:27,0:27:75.23:0,75,1014	0/0:15,0:15:42.14:0,42,587	0/0:19,0:19:54.18:0,54,756	0/0:24,0:24:69.20:0,69,905	0/0:15,0:15:42.14:0,42,573	0/0:17,0:17:51.17:0,51,712	0/0:15,0:15:45.15:0,45,629	0/0:17,0:17:48.16:0,48,664	0/0:23,0:23:69.16:0,69,892	0/0:16,0:16:48.16:0,48,670	0/0:11,0:11:33.11:0,33,460	1/1:1,5:6:9.03:108,9,0	0/0:14,0:14:42.14:0,42,588	0/0:18,0:18:54.18:0,54,756	0/0:16,0:16:45.14:0,45,614	0/0:13,0:13:36.12:0,36,500	0/0:34,0:33:96.32:0,96,1342	0/0:10,0:10:27.09:0,27,377	0/0:10,0:9:30.10:0,30,419	0/0:28,0:28:75.24:0,75,1025	0/0:20,0:20:60.18:0,60,820	0/0:19,0:19:57.18:0,57,780	0/0:17,0:17:51.15:0,51,680	0/0:6,0:6:18.06:0,18,252
chr10	96775432	.	A	AC	7891.50	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-11.708;DP=507;FS=1.152;HRun=7;HaplotypeScore=52.0885;InbreedingCoeff=0.9958;MQ=89.72;MQ0=0;MQRankSum=-2.387;QD=28.28;ReadPosRankSum=0.080;VQSLOD=5.2929;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,102,962	1/1:1,10:11:30.09:362,30,0	0/0:18,0:19:42.40:0,42,356	0/0:23,1:24:31.19:0,31,458	1/1:3,15:18:36.11:435,36,0	1/1:2,24:26:63.14:744,63,0	1/1:3,18:21:48.15:580,48,0	0/0:16,0:16:39.06:0,39,376	1/1:2,6:8:18.06:217,18,0	1/1:3,8:11:24.07:290,24,0	1/1:3,11:14:27.07:324,27,0	1/1:2,13:15:33.10:397,33,0	1/1:3,13:16:42.12:496,42,0	1/1:2,14:16:39.12:471,39,0	1/1:2,15:17:48.14:567,48,0	0/0:20,0:20:48.07:0,48,463	1/1:3,18:21:51.16:616,51,0	0/0:25,0:25:63.10:0,63,608	0/0:15,0:16:44.10:0,44,411	0/0:18,0:18:42.06:0,42,406	0/0:18,0:18:48.07:0,48,464	1/1:2,18:20:42.13:507,42,0	1/1:3,6:9:15.05:181,15,0	1/1:2,14:16:42.13:507,42,0	1/1:3,17:20:51.16:616,51,0	1/1:4,16:20:51.10:582,51,0	0/0:10,0:10:30.05:0,30,290	0/0:21,0:21:60.09:0,60,579
chr10	96776089	.	A	AAC	701.54	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=5.604;DP=442;FS=4.215;HRun=0;HaplotypeScore=55.7125;InbreedingCoeff=0.1974;MQ=68.50;MQ0=7;MQRankSum=-0.756;QD=10.79;ReadPosRankSum=6.170;VQSLOD=2.8625;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:5.90:0,6,193	0/0:5,0:5:4.74:0,5,73	0/0:34,0:11:19.24:0,19,131	0/0:28,0:11:14.35:0,14,77	0/0:22,0:21:17.17:0,17,359	0/0:9,0:9:13.15:0,13,155	0/0:12,0:12:11.94:0,12,97	0/0:24,0:24:25.38:0,25,320	0/0:16,0:16:21.58:0,22,186	0/0:13,0:13:37.82:0,38,368	0/0:19,0:19:32.25:0,32,311	0/0:12,0:12:20.86:0,21,173	0/0:12,0:12:14.86:0,15,110	0/0:5,0:5:3.98:0,4,76	0/0:10,0:10:9.40:0,9,125	0/1:8,0:8:5.72:6,0,25	0/0:26,0:26:32.62:0,33,246	1/1:0,21:24:56.52:753,57,0	0/0:16,0:16:22.83:0,23,249	0/1:15,0:15:42.99:43,0,90	0/1:8,0:7:14.89:15,0,18	0/0:4,0:4:11.86:0,12,103	0/0:14,0:14:40.07:0,40,316	0/1:10,0:10:5.28:5,0,68	0/0:13,0:13:20.89:0,21,181	0/0:13,0:13:36.73:0,37,317	0/0:24,0:23:9.95:0,10,243	0/0:21,0:21:9.92:0,10,195
chr10	96776352	.	G	GT	912.54	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.431;DP=533;FS=4.127;HRun=8;HaplotypeScore=58.9822;InbreedingCoeff=0.9331;MQ=69.47;MQ0=0;MQRankSum=-0.114;QD=22.81;ReadPosRankSum=0.473;VQSLOD=4.3185;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,22:29:63.19:722,63,0	0/0:13,0:13:39.02:0,39,357	0/0:24,0:17:4.89:0,5,145	0/0:35,0:25:34.20:0,34,296	0/0:18,0:18:41.98:0,42,374	0/0:18,0:18:48.02:0,48,439	0/0:17,0:17:47.99:0,48,429	0/0:28,0:28:62.95:0,63,565	0/0:14,0:14:42.02:0,42,384	0/0:19,0:19:51.50:0,51,467	0/0:11,0:11:33.02:0,33,302	0/0:12,0:12:36.02:0,36,329	0/0:14,0:14:42.02:0,42,384	0/0:10,0:10:27.01:0,27,247	0/0:19,0:19:54.02:0,54,494	1/1:1,10:11:27.08:312,27,0	0/0:20,0:20:24.08:0,24,382	0/0:21,0:21:57.03:0,57,521	0/0:23,0:23:30.49:0,30,443	0/0:28,0:28:78.01:0,78,706	0/0:18,0:18:48.01:0,48,434	0/0:8,0:8:20.99:0,21,187	0/0:13,0:13:39.02:0,39,356	0/0:24,0:26:69.03:0,69,631	0/0:21,0:21:47.95:0,48,438	0/0:22,0:22:63.03:0,63,576	0/0:24,0:24:72:0,72,651	0/0:16,0:15:45.02:0,45,412
chr10	96777158	.	C	CTGTA	4392.62	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-11.017;DP=652;FS=1.727;HRun=0;HaplotypeScore=103.1442;InbreedingCoeff=0.9982;MQ=69.45;MQ0=2;MQRankSum=-2.424;QD=61.01;ReadPosRankSum=2.817;VQSLOD=6.8824;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,36:42:87.30:2315,87,0	0/0:9,0:9:27.08:0,27,473	0/0:19,0:16:48.14:0,48,847	0/0:25,0:22:63.14:0,63,1037	0/0:12,0:12:33.11:0,33,609	0/0:29,0:29:87.28:0,87,1591	0/0:25,0:25:72.23:0,72,1312	0/0:27,0:27:60.21:0,60,1115	0/0:23,0:23:66.23:0,66,1223	0/0:19,0:19:54.18:0,54,977	0/0:14,0:14:42.14:0,42,776	0/0:20,0:20:60.21:0,60,1120	0/0:26,0:26:75.23:0,75,1337	0/0:20,0:20:60.21:0,60,1099	0/0:24,0:24:63.22:0,63,1175	1/1:1,27:30:78.27:2077,78,0	0/0:35,0:35:99:0,102,1903	0/0:35,0:35:99:0,102,1894	0/0:15,0:15:36.11:0,36,637	0/0:18,0:18:51.16:0,51,920	0/0:41,0:41:99:0,123,2247	0/0:23,0:23:69.24:0,69,1287	0/0:17,0:17:51.17:0,51,938	0/0:31,0:31:90.23:0,90,1573	0/0:17,0:17:48.16:0,48,895	0/0:23,0:23:54.19:0,54,1006	0/0:25,0:25:72.25:0,72,1344	0/0:8,0:8:24.08:0,24,448
chr10	96777977	.	C	CTTT	3983.59	PASS	AB=0.661;AC=41;AF=0.732;AN=56;BaseQRankSum=-2.321;DP=532;FS=2.253;HRun=13;HaplotypeScore=105.0408;InbreedingCoeff=-0.0085;MQ=80.13;MQ0=1;MQRankSum=-0.757;QD=8.39;ReadPosRankSum=0.162;VQSLOD=0.7408;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,14:26:3.75:443,4,0	0/1:3,0:8:21.48:21,0,23	0/0:37,0:25:10.21:0,10,134	0/1:15,1:14:15.09:33,0,15	1/1:4,1:20:35.86:335,36,0	0/1:3,0:15:16.76:45,0,17	1/1:6,0:15:17.20:73,17,0	1/1:5,1:25:40.86:418,41,0	1/1:4,0:12:7.51:44,8,0	0/1:15,0:23:17.73:92,0,18	0/1:10,0:16:11.05:59,0,11	1/1:2,0:21:21.64:58,22,0	1/1:1,0:11:11.01:30,11,0	0/1:6,0:15:6.94:7,0,23	1/1:9,0:21:28.63:121,29,0	1/1:7,11:23:38.14:585,38,0	0/1:6,0:29:12.78:40,0,13	0/0:5,0:19:42.75:0,43,265	1/1:1,2:15:40.17:382,40,0	1/1:5,3:21:50.09:487,50,0	1/1:5,0:8:9.45:74,9,0	1/1:3,0:11:9.77:36,10,0	0/1:3,0:16:28.49:28,0,44	0/1:6,0:25:23.55:43,0,24	0/1:9,0:28:51.41:75,0,51	0/1:17,0:23:6.91:100,0,7	1/1:3,1:15:20.94:190,21,0	1/1:3,0:15:23.41:165,23,0
chr10	96778159	.	GGTGTGGCA	G	11961.84	PASS	AB=0.731;AC=49;AF=0.907;AN=54;BaseQRankSum=-0.193;DP=644;FS=0.000;HRun=0;HaplotypeScore=175.5417;InbreedingCoeff=0.6557;MQ=59.09;MQ0=1;MQRankSum=-3.665;QD=20.70;ReadPosRankSum=4.536;VQSLOD=3.7118;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,13:46:18.06:417,18,0	1/1:5,5:10:12.04:258,12,0	0/0:21,0:19:5.82:0,6,35	0/0:27,0:24:20.58:0,21,386	0/1:12,7:19:0.32:1,0,0	1/1:11,10:21:21.07:527,21,0	1/1:7,15:22:27.09:677,27,0	./.	1/1:13,12:25:24.04:546,24,0	1/1:13,11:24:30.08:638,30,0	1/1:11,9:20:8.77:207,9,0	1/1:12,23:35:60.21:1504,60,0	1/1:11,8:19:21.07:527,21,0	1/1:12,17:29:36.12:866,36,0	1/1:8,18:26:33.11:783,33,0	1/1:13,12:25:33.11:828,33,0	1/1:16,11:27:21.07:514,21,0	1/1:10,16:26:30.47:813,30,0	1/1:6,4:10:15.04:295,15,0	1/1:7,9:16:12.04:236,12,0	1/1:39,15:54:6.02:151,6,0	1/1:16,10:26:8.58:224,9,0	1/1:13,5:18:12.04:274,12,0	1/1:15,12:27:9.01:226,9,0	1/1:9,5:14:9.03:225,9,0	1/1:12,6:18:24.04:547,24,0	1/1:6,12:18:24.08:602,24,0	1/1:2,1:3:3.01:75,3,0
chr10	96778771	.	G	GGAGA	792.70	PASS	AB=1.000;AC=37;AF=0.881;AN=42;BaseQRankSum=-2.894;DP=614;FS=9.997;HRun=0;HaplotypeScore=121.6369;InbreedingCoeff=-0.1674;MQ=71.66;MQ0=11;MQRankSum=0.460;QD=1.77;ReadPosRankSum=1.702;VQSLOD=1.7718;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:30:2.93:25,3,0	1/1:8,0:8:3:25,3,0	./.	./.	./.	1/1:16,0:16:0.47:1,0,0	1/1:16,0:16:2.29:22,2,0	./.	1/1:23,0:23:3.87:25,4,0	1/1:19,0:19:0.66:17,1,0	./.	1/1:21,0:20:5.94:41,6,0	0/1:24,0:24:21.90:183,0,22	0/1:11,0:12:17.88:18,0,22	0/1:27,0:27:15.35:15,0,22	0/1:17,0:17:17.17:35,0,17	1/1:19,6:27:9.70:153,10,0	./.	1/1:16,0:16:0.47:1,0,0	1/1:24,0:22:3.41:18,3,0	0/1:27,0:27:11.83:56,0,12	1/1:27,0:27:7.81:55,8,0	1/1:27,0:27:5.99:48,6,0	1/1:26,0:25:2.55:21,3,0	./.	1/1:24,0:24:5.88:43,6,0	1/1:19,0:19:3.46:24,3,0	1/1:17,0:16:10.80:74,11,0
chr10	96779812	.	GA	G	7690.51	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=8.642;DP=571;FS=8.503;HRun=9;HaplotypeScore=62.2297;InbreedingCoeff=0.9678;MQ=73.94;MQ0=0;MQRankSum=-2.152;QD=22.89;ReadPosRankSum=5.937;VQSLOD=5.0769;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:93.28:0,93,1073	1/1:1,10:11:27.01:246,27,0	0/0:15,1:15:17.95:0,18,320	0/0:15,0:12:26.97:0,27,282	1/1:3,13:16:39.01:357,39,0	1/1:3,24:27:66.03:604,66,0	1/1:4,18:23:47.05:418,47,0	0/0:34,0:34:90.25:0,90,1022	1/1:3,16:19:48.02:439,48,0	1/1:0,17:17:51.03:467,51,0	1/1:6,17:23:13.50:377,14,0	1/1:2,22:24:66.04:604,66,0	1/1:2,18:20:54.03:494,54,0	1/1:1,20:21:48.03:440,48,0	1/1:0,16:16:48.03:439,48,0	0/0:15,0:15:42.12:0,42,485	1/1:1,32:34:95.09:857,95,0	0/0:27,0:27:72.20:0,72,821	0/0:22,0:22:57.15:0,57,644	0/0:27,0:27:69.19:0,69,780	0/0:18,0:18:51.15:0,51,589	1/1:3,19:22:57.03:521,57,0	1/1:2,16:18:45.02:411,45,0	1/1:2,16:18:45.02:412,45,0	1/1:0,6:6:15.01:137,15,0	1/1:3,17:21:53.05:468,53,0	0/0:22,0:22:63.12:0,63,676	0/0:1,0:3:2.84:0,3,14
chr10	96780852	.	A	AGTGT	3816.73	PASS	AB=0.917;AC=36;AF=0.750;AN=48;BaseQRankSum=-4.449;DP=648;FS=1.216;HRun=0;HaplotypeScore=142.9010;InbreedingCoeff=0.3499;MQ=62.04;MQ0=5;MQRankSum=1.716;QD=7.48;ReadPosRankSum=0.971;VQSLOD=2.9036;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,1:39:13.65:93,0,14	1/1:17,0:17:15.03:206,15,0	./.	./.	0/0:13,2:16:0.47:0,0,1	1/1:32,0:29:32.98:499,33,0	1/1:18,0:21:3.01:49,3,0	./.	1/1:12,1:17:9.03:149,9,0	1/1:26,0:24:15.01:215,15,0	0/1:8,0:8:0:0,0,0	0/1:28,6:36:8.83:316,0,9	1/1:17,0:17:2.99:40,3,0	1/1:16,8:28:11.77:224,12,0	1/1:23,0:21:21.05:299,21,0	1/1:20,4:24:5.64:82,6,0	0/1:25,0:25:14.46:92,0,14	1/1:17,0:16:15.05:236,15,0	0/0:22,0:27:8.86:0,9,84	0/0:8,0:11:4.94:0,5,22	1/1:45,0:59:2.89:34,3,0	1/1:19,0:19:12.02:152,12,0	1/1:8,5:15:5.90:119,6,0	1/1:17,14:34:8.88:412,9,0	1/1:23,0:23:21.03:268,21,0	1/1:21,0:27:25.84:332,26,0	0/0:9,0:14:6.48:0,6,57	./.
chr10	96782309	.	G	GT	244.49	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.823;DP=660;FS=0.000;HRun=0;HaplotypeScore=72.0017;InbreedingCoeff=0.9904;MQ=91.85;MQ0=2;MQRankSum=-1.176;QD=22.23;ReadPosRankSum=0.855;VQSLOD=4.8816;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1538	0/0:6,0:6:18.05:0,18,233	0/0:41,0:40:99:0,103,1304	0/0:30,0:29:71.25:0,71,919	0/0:31,0:31:93.28:0,93,1263	0/0:16,0:16:48.14:0,48,637	0/0:28,0:28:84.23:0,84,1123	0/0:33,0:33:99:0,99,1290	0/0:21,0:21:60.16:0,60,786	0/0:27,0:27:81.26:0,81,1116	0/0:14,0:14:42.14:0,42,583	0/0:14,0:14:42.14:0,42,586	0/0:21,0:21:63.20:0,63,862	0/0:19,0:19:51.17:0,51,712	0/0:18,0:18:54.17:0,54,739	0/0:20,0:20:57.18:0,57,779	0/0:38,0:38:99:0,111,1527	1/1:3,8:11:29.57:339,30,0	0/0:25,0:25:75.23:0,75,1026	0/0:28,0:28:84.27:0,84,1149	0/0:24,0:24:69.20:0,69,929	0/0:29,0:29:84.27:0,84,1153	0/0:24,0:24:69.22:0,69,944	0/0:31,0:31:93.30:0,93,1283	0/0:16,0:16:45.15:0,45,628	0/0:21,0:21:60.19:0,60,823	0/0:27,0:27:81.27:0,81,1128	0/0:9,0:9:27.06:0,27,328
chr10	96783664	.	T	TCCCCCCCACCCCCCG	7751.97	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.984;DP=597;FS=4.676;HRun=0;HaplotypeScore=243.6384;InbreedingCoeff=0.9800;MQ=83.31;MQ0=0;MQRankSum=-9.991;QD=100.67;ReadPosRankSum=-5.485;VQSLOD=2.8840;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.31:0,90,3917	0/0:7,0:7:18.05:0,18,686	0/0:24,0:24:66.14:0,66,2587	0/0:16,0:16:42.10:0,42,1251	0/0:20,0:20:60.21:0,60,2611	0/0:17,0:17:48.16:0,48,2107	0/0:28,0:28:84.25:0,84,2841	1/1:23,0:23:60.17:1541,60,0	0/0:25,0:25:69.21:0,69,2547	0/0:24,0:24:72.24:0,72,2814	0/0:16,0:16:48.16:0,48,1949	0/0:21,0:21:54.17:0,54,2097	0/0:20,0:20:60.18:0,60,2386	0/0:33,0:33:99:0,99,4261	0/0:34,0:34:99:0,99,3971	0/0:27,0:27:78.25:0,78,3019	0/0:44,0:44:99:0,129,4659	0/0:22,0:22:66.23:0,66,2555	1/1:9,0:9:27.09:1126,27,0	1/1:14,1:15:27.09:1475,27,0	1/1:7,2:9:7.99:329,8,0	0/0:27,0:27:78.27:0,78,3158	0/0:17,0:17:51.18:0,51,2105	0/0:28,0:28:81.26:0,81,3124	0/0:19,0:19:54.19:0,54,2232	0/0:21,0:21:63.22:0,63,2736	1/1:14,1:16:45.15:2403,45,0	1/1:4,1:5:15.05:878,15,0
chr10	96783666	.	CAGGAG	C	306.87	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=4.215;DP=547;FS=2.263;HRun=0;HaplotypeScore=106.6588;InbreedingCoeff=0.7899;MQ=88.08;MQ0=0;MQRankSum=0.003;QD=17.05;ReadPosRankSum=-2.613;VQSLOD=3.0897;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.33:0,96,3190	0/0:7,0:7:21.07:0,21,696	0/0:24,0:24:72.25:0,72,2252	0/0:19,0:19:51.17:0,51,1423	0/0:20,0:20:60.21:0,60,1997	0/0:16,0:16:48.16:0,48,1598	0/0:28,0:28:84.27:0,84,2554	1/1:0,6:6:18.03:236,18,0	0/0:23,0:23:69.21:0,69,1948	0/0:28,0:28:84.29:0,84,2624	0/0:16,0:16:48.16:0,48,1599	0/0:21,0:21:63.22:0,63,2037	0/0:20,0:20:60.21:0,60,1995	0/0:33,0:33:99:0,99,3241	0/0:35,0:35:99:0,105,3363	0/0:29,0:29:87.28:0,87,2811	0/0:43,0:43:99:0,129,4127	0/0:22,0:22:66.23:0,66,2107	1/1:1,0:1:3.01:50,3,0	1/1:4,0:4:8.90:117,9,0	0/1:3,0:3:4.53:15,0,5	0/0:27,0:27:81.28:0,81,2565	0/0:18,0:18:54.19:0,54,1698	0/0:27,0:27:81.28:0,81,2642	0/0:19,0:19:57.20:0,57,1797	0/0:22,0:22:66.23:0,66,2196	1/1:3,0:3:5.34:22,5,0	1/1:1,0:1:2.94:18,3,0
chr10	96783673	.	C	CACGG	3546.94	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.697;DP=596;FS=5.158;HRun=0;HaplotypeScore=118.3044;InbreedingCoeff=0.9802;MQ=89.53;MQ0=0;MQRankSum=-10.673;QD=54.57;ReadPosRankSum=-4.574;VQSLOD=3.6738;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1974	0/0:8,0:8:24.08:0,24,479	0/0:30,0:30:84.22:0,84,1445	0/0:21,0:21:48.16:0,48,801	0/0:22,0:22:57.20:0,57,1138	0/0:16,0:16:48.16:0,48,959	0/0:26,0:26:75.24:0,75,1453	1/1:18,0:18:48.16:1250,48,0	0/0:18,0:18:54.17:0,54,1025	0/0:28,0:28:78.26:0,78,1514	0/0:17,0:17:50.94:0,51,905	0/0:22,0:22:63.20:0,63,1206	0/0:22,0:22:66.21:0,66,1265	0/0:34,0:34:99:0,99,1977	0/0:34,0:34:99:0,102,1988	0/0:26,0:26:75.26:0,75,1479	0/0:41,0:41:99:0,120,2397	0/0:22,0:22:66.19:0,66,1217	1/1:11,0:11:33.09:712,33,0	1/1:8,1:9:21.03:435,21,0	1/1:9,2:11:11.95:184,12,0	0/0:25,0:25:69.22:0,69,1334	0/0:15,0:15:45.12:0,45,827	0/0:27,0:27:81.28:0,81,1618	0/0:20,0:20:54.17:0,54,1044	0/0:22,0:22:63.22:0,63,1240	1/1:9,2:11:30.10:744,30,0	1/1:4,1:5:9.03:222,9,0
chr10	96785626	.	TAC	T	1042.44	PASS	AB=0.884;AC=37;AF=0.712;AN=52;BaseQRankSum=1.385;DP=553;FS=23.392;HRun=0;HaplotypeScore=83.9977;InbreedingCoeff=-0.1979;MQ=65.91;MQ0=12;MQRankSum=0.505;QD=2.32;ReadPosRankSum=-0.693;VQSLOD=0.2279;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:11.80:19,0,12	1/1:2,0:6:8.52:42,9,0	./.	./.	1/1:19,0:19:8.39:43,8,0	1/1:12,0:12:8.72:63,9,0	0/1:20,0:20:50.66:72,0,51	0/0:28,0:26:1.25:0,1,3	0/1:17,1:18:30.65:48,0,31	1/1:21,0:21:2.95:19,3,0	0/1:16,0:18:13.39:46,0,13	1/1:16,1:17:11.54:95,12,0	0/1:13,0:14:14.48:14,0,19	1/1:12,0:12:3:32,3,0	1/1:17,6:23:10.84:101,11,0	1/1:15,0:24:11.36:56,11,0	1/1:27,1:27:9.68:105,10,0	0/1:14,0:19:21.62:62,0,22	0/1:17,0:16:8.16:8,0,15	0/1:9,0:10:8.14:8,0,18	0/0:27,0:27:1.68:0,2,24	1/1:12,8:20:2.54:32,3,0	0/1:11,4:15:20.25:20,0,46	1/1:29,2:33:9.79:168,10,0	0/1:11,6:17:25.96:26,0,38	0/1:21,0:20:19.11:25,0,19	1/1:13,0:17:8.52:42,9,0	1/1:2,0:10:8.52:42,9,0
chr10	96787201	.	GAAA	G	8202.03	PASS	AB=0.544;AC=37;AF=0.661;AN=56;BaseQRankSum=-12.828;DP=542;FS=6.315;HRun=12;HaplotypeScore=102.1421;InbreedingCoeff=0.7573;MQ=72.71;MQ0=2;MQRankSum=-1.545;QD=21.47;ReadPosRankSum=3.733;VQSLOD=3.7142;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:35:81.94:0,82,623	1/1:1,11:12:29.99:358,30,0	0/0:24,0:18:24.79:0,25,237	0/0:21,0:15:21.80:0,22,246	1/1:1,24:25:68.86:826,69,0	1/1:1,16:17:33.10:417,33,0	1/1:2,12:14:27.07:341,27,0	0/1:4,2:28:38.53:39,0,49	1/1:6,13:19:30.07:379,30,0	1/1:6,14:20:45.08:547,45,0	1/1:6,17:24:46.08:518,46,0	1/1:1,13:14:33.10:417,33,0	1/1:1,5:6:15.04:190,15,0	1/1:3,15:18:39.09:488,39,0	1/1:3,17:20:42.04:508,42,0	0/0:2,0:14:29.90:0,30,233	1/1:5,21:26:57.07:684,57,0	0/0:15,0:15:36.12:0,36,661	0/1:4,1:25:8.63:9,0,32	0/0:2,0:14:14.59:0,15,32	0/0:3,0:21:18.69:0,19,40	1/1:2,5:7:12.02:142,12,0	1/1:0,18:18:44.56:520,45,0	1/1:2,19:21:42.13:531,42,0	1/1:2,20:22:44.98:529,45,0	1/1:4,20:24:60.16:746,60,0	0/1:4,1:21:14.95:15,0,21	0/0:1,0:11:11.72:0,12,44
chr10	96788290	.	T	TA	2351.41	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.533;DP=717;FS=4.873;HRun=1;HaplotypeScore=67.2892;InbreedingCoeff=0.9992;MQ=73.59;MQ0=0;MQRankSum=-3.060;QD=37.32;ReadPosRankSum=1.089;VQSLOD=4.0999;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:35:90.30:1349,90,0	0/0:14,0:14:42.12:0,42,531	0/0:24,0:24:71.15:0,71,824	0/0:18,0:19:49.62:0,50,564	0/0:30,0:30:90.28:0,90,1153	0/0:24,0:24:72.23:0,72,933	0/0:36,0:36:99:0,108,1388	0/0:44,0:44:99:0,126,1610	0/0:25,0:25:72.22:0,72,920	0/0:42,0:42:99:0,123,1586	0/0:22,0:22:66.21:0,66,857	0/0:31,0:31:93.29:0,93,1193	0/0:28,0:28:78.24:0,78,997	0/0:27,0:27:78.25:0,78,1012	0/0:24,0:24:72.23:0,72,934	1/1:0,28:28:75.25:1124,75,0	0/0:9,0:9:27.09:0,27,351	0/0:16,0:16:45.15:0,45,584	0/0:27,0:27:75.24:0,75,962	0/0:34,0:34:99:0,102,1293	0/0:25,0:25:75.23:0,75,958	0/0:27,0:27:81.25:0,81,1038	0/0:24,0:24:66.20:0,66,843	0/0:24,0:24:72.22:0,72,920	0/0:19,0:19:54.15:0,54,675	0/0:22,0:22:66.21:0,66,856	0/0:27,0:27:81.26:0,81,1049	0/0:10,0:10:30.07:0,30,372
chr10	96788602	.	G	GT	1537.93	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.794;DP=586;FS=5.723;HRun=6;HaplotypeScore=56.4640;InbreedingCoeff=0.9989;MQ=77.30;MQ0=0;MQRankSum=-3.150;QD=29.02;ReadPosRankSum=2.172;VQSLOD=4.4179;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:33:78.25:981,78,0	0/0:10,0:10:30.07:0,30,306	0/0:12,0:12:29.09:0,29,277	0/0:15,0:15:35.78:0,36,358	0/0:22,0:22:66.15:0,66,673	0/0:12,0:12:30.07:0,30,306	0/0:27,0:27:75.16:0,75,765	0/0:36,0:36:93.18:0,93,937	0/0:25,0:25:75.17:0,75,764	0/0:16,0:16:39.09:0,39,398	0/0:14,0:14:39.09:0,39,398	0/0:20,0:20:54.12:0,54,551	0/0:17,0:17:48.11:0,48,490	0/0:27,0:27:75.13:0,75,750	0/0:16,0:16:45.10:0,45,459	1/1:0,20:20:54.17:679,54,0	0/0:17,0:17:51.11:0,51,520	0/0:17,0:17:48.11:0,48,489	0/0:18,0:18:51.11:0,51,515	0/0:23,0:23:60.13:0,60,612	0/0:37,0:37:99:0,102,1030	0/0:26,0:26:72.16:0,72,735	0/0:22,0:22:63.14:0,63,643	0/0:19,0:19:45.10:0,45,459	0/0:18,0:18:48.11:0,48,490	0/0:29,0:29:87.20:0,87,888	0/0:23,0:23:63.14:0,63,642	0/0:15,0:15:39.09:0,39,398
chr10	96789764	.	A	AGT	1024.45	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.600;DP=645;FS=5.047;HRun=0;HaplotypeScore=90.9988;InbreedingCoeff=0.9528;MQ=69.01;MQ0=1;MQRankSum=-0.402;QD=36.59;ReadPosRankSum=2.388;VQSLOD=6.0683;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:84.23:0,84,1001	0/0:8,0:8:24.08:0,24,293	0/0:26,0:22:31.67:0,32,475	0/0:41,0:37:51.71:0,52,608	0/0:25,0:25:66.21:0,66,807	0/0:18,0:18:39.12:0,39,477	0/0:31,0:31:54.12:0,54,632	0/0:29,0:29:60.19:0,60,729	0/0:21,0:21:48.15:0,48,586	0/0:32,0:33:87.09:0,87,1022	0/0:18,0:18:45.13:0,45,538	0/0:24,0:24:63.20:0,63,769	0/0:7,0:7:18.06:0,18,220	0/0:17,0:17:42.13:0,42,513	0/0:17,0:17:45.14:0,45,550	0/0:18,0:18:51.16:0,51,623	0/0:31,0:31:60.15:0,60,706	1/1:3,25:28:69.24:1119,69,0	0/0:26,0:26:63.18:0,63,757	0/0:14,0:14:39.12:0,39,476	0/0:57,0:58:99:0,118,1394	0/0:13,0:13:27.08:0,27,330	0/0:21,0:21:45.13:0,45,538	0/0:25,0:27:71.89:0,72,835	0/0:17,0:17:36.11:0,36,440	0/0:20,0:20:13.62:0,14,574	0/0:15,0:15:33.07:0,33,377	0/0:7,0:7:15.05:0,15,182
chr10	96789867	.	GTGTGTGTT	G	5113.57	PASS	AB=1.000;AC=49;AF=0.907;AN=54;BaseQRankSum=-2.197;DP=493;FS=8.230;HRun=0;HaplotypeScore=101.0878;InbreedingCoeff=0.3118;MQ=48.83;MQ0=26;MQRankSum=1.183;QD=11.36;ReadPosRankSum=3.179;VQSLOD=2.2379;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:41.27:337,41,0	1/1:5,0:4:8.96:69,9,0	0/0:25,0:5:5.01:0,5,53	0/1:46,0:9:13.16:13,0,44	1/1:10,0:10:8.81:74,9,0	./.	1/1:22,0:22:38.65:381,39,0	1/1:20,0:17:25.49:198,25,0	1/1:2,10:12:9.03:244,9,0	1/1:8,0:8:20.92:190,21,0	1/1:8,0:7:8.98:73,9,0	1/1:6,19:25:5.82:140,6,0	1/1:3,12:14:5.54:162,6,0	1/1:10,0:10:14.58:107,15,0	1/1:16,0:16:20.95:168,21,0	1/1:1,12:13:5.91:163,6,0	1/1:22,1:22:45.55:412,46,0	0/1:24,0:24:3.51:338,0,4	1/1:15,0:9:17.97:149,18,0	1/1:14,0:13:26.88:211,27,0	1/1:42,0:41:39.95:320,40,0	0/1:13,0:13:0:0,0,0	1/1:6,0:6:8.98:73,9,0	1/1:29,1:29:54.31:540,54,0	1/1:12,1:13:22.47:295,22,0	1/1:16,0:15:33.03:252,33,0	1/1:12,0:11:17.83:133,18,0	1/1:7,0:7:8.97:70,9,0
chr10	96789869	.	GTGTGTT	G	4799.09	PASS	AB=0.760;AC=50;AF=0.926;AN=54;BaseQRankSum=-1.545;DP=487;FS=12.651;HRun=0;HaplotypeScore=92.1954;InbreedingCoeff=0.4549;MQ=50.76;MQ0=24;MQRankSum=-0.219;QD=10.86;ReadPosRankSum=2.809;VQSLOD=2.4489;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:44.46:359,44,0	1/1:5,0:4:8.96:69,9,0	0/0:27,0:8:11:0,11,103	0/1:44,0:10:10.36:10,0,54	1/1:8,1:9:9.07:74,9,0	./.	1/1:22,0:22:44.19:389,44,0	1/1:19,0:16:24.93:186,25,0	1/1:12,0:12:9.03:148,9,0	1/1:8,0:8:20.91:166,21,0	1/1:9,0:8:11.98:98,12,0	1/1:25,0:25:5.81:76,6,0	1/1:15,0:14:5.71:98,6,0	1/1:9,0:9:14.77:107,15,0	1/1:15,0:15:20.74:167,21,0	1/1:13,0:13:5.93:98,6,0	1/1:22,0:21:46.56:382,47,0	1/1:24,0:24:12.66:383,13,0	1/1:15,0:9:17.97:149,18,0	1/1:15,0:14:29.86:233,30,0	1/1:40,0:39:38.92:316,39,0	0/1:1,12:13:0:0,0,0	1/1:7,0:7:11.95:93,12,0	1/1:29,0:28:53.88:475,54,0	1/1:12,0:12:20.97:217,21,0	1/1:16,0:15:35.67:281,36,0	1/1:12,0:11:17.72:133,18,0	1/1:8,0:8:11.94:91,12,0
chr10	96789979	.	C	CGT	647.71	PASS	AB=0.905;AC=15;AF=0.288;AN=52;BaseQRankSum=-3.325;DP=587;FS=5.007;HRun=0;HaplotypeScore=92.0160;InbreedingCoeff=0.1174;MQ=72.56;MQ0=7;MQRankSum=-1.013;QD=2.46;ReadPosRankSum=-1.668;VQSLOD=1.6115;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:29:14.20:0,14,70	0/0:7,0:8:8.86:0,9,80	./.	./.	0/0:12,0:13:8.86:0,9,80	0/0:11,0:15:14.70:0,15,127	0/0:24,0:28:17.65:0,18,142	0/1:23,0:21:42.53:85,0,43	0/0:16,0:16:15.01:0,15,146	0/1:25,0:26:1.30:1,0,155	0/0:11,0:15:14.83:0,15,133	0/1:40,0:40:3.28:3,0,346	0/0:15,0:18:23.72:0,24,216	0/1:7,8:18:27.13:39,0,27	0/0:15,0:15:17.99:0,18,170	0/0:5,0:16:22.52:0,23,112	0/0:22,0:26:35.30:0,35,294	0/0:11,0:26:46.38:0,46,218	1/1:15,2:16:6:69,6,0	0/1:19,1:20:49.48:108,0,49	0/1:35,16:51:99:246,0,104	0/0:14,0:15:17.86:0,18,171	0/1:15,1:17:27.29:39,0,27	0/0:32,0:33:48.02:0,48,462	0/1:9,1:14:18.65:19,0,170	0/1:13,0:16:8.09:8,0,117	1/1:6,4:10:9.02:135,9,0	1/1:5,0:7:5.98:47,6,0
chr10	96791356	.	G	GA	8407.94	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-11.317;DP=548;FS=6.314;HRun=9;HaplotypeScore=52.9667;InbreedingCoeff=0.9318;MQ=69.85;MQ0=0;MQRankSum=-0.079;QD=24.02;ReadPosRankSum=3.483;VQSLOD=5.6683;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:86.97:0,87,755	1/1:4,9:13:27.07:299,27,0	0/0:13,0:13:29.91:0,30,251	0/0:11,0:10:11.97:0,12,101	1/1:7,18:25:57.10:608,57,0	1/1:3,14:17:13.05:372,13,0	1/1:4,12:16:13.05:372,13,0	0/0:25,0:25:59.96:0,60,515	1/1:3,18:21:51.14:564,51,0	1/1:6,25:31:78.19:848,78,0	1/1:2,8:10:0.98:218,1,0	1/1:1,15:16:39.11:431,39,0	1/1:2,12:16:41.78:427,42,0	1/1:1,15:16:36.10:398,36,0	1/1:6,17:23:22.07:472,22,0	0/0:12,0:12:29.99:0,30,260	1/1:3,29:33:78.04:844,78,0	1/1:3,22:26:69.02:744,69,0	0/0:18,1:19:17.80:0,18,384	0/0:30,0:30:47.58:0,48,575	0/0:26,0:26:65.95:0,66,567	1/1:4,7:11:18.05:199,18,0	1/1:5,11:17:38.77:393,39,0	1/1:3,14:18:41.95:446,42,0	1/1:4,12:16:31.33:335,31,0	1/1:9,16:25:19.06:438,19,0	0/0:22,0:22:53.95:0,54,465	0/0:9,0:9:5.30:0,5,182
chr10	96792564	.	TA	T	2206.18	PASS	AB=0.896;AC=16;AF=0.286;AN=56;BaseQRankSum=5.022;DP=544;FS=8.129;HRun=11;HaplotypeScore=73.6722;InbreedingCoeff=0.6871;MQ=66.90;MQ0=4;MQRankSum=1.396;QD=11.99;ReadPosRankSum=1.024;VQSLOD=3.0252;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:99:0,108,1094	0/0:5,0:5:15.03:0,15,154	0/0:22,0:12:3.64:0,4,142	0/0:14,0:12:19.67:0,20,146	0/0:28,2:30:10.80:0,11,495	0/0:13,1:15:4.59:0,5,289	0/0:11,0:11:33.07:0,33,344	1/1:5,17:22:47.92:394,48,0	0/0:22,0:22:49.34:0,49,500	0/0:28,0:27:72.15:0,72,756	0/1:18,2:20:4.18:4,0,371	0/1:8,1:9:0.58:1,0,200	0/0:17,0:17:45.11:0,45,480	0/0:17,0:17:33:0,33,326	0/0:16,1:17:14.44:0,14,352	0/0:12,0:12:33.08:0,33,352	0/1:18,3:20:28.84:29,0,328	0/0:20,1:20:26.47:0,26,478	1/1:5,12:17:35.94:296,36,0	1/1:4,29:36:87.91:695,88,0	1/1:0,10:10:29.97:246,30,0	0/1:8,1:9:0.57:1,0,200	0/0:14,0:14:39.06:0,39,403	0/0:18,0:18:48.10:0,48,501	0/0:27,0:27:66.17:0,66,704	0/0:28,1:28:35.37:0,35,553	1/1:7,21:30:63.98:504,64,0	1/1:1,9:10:26.96:222,27,0
chr10	96792681	.	G	GA	9433.80	PASS	AB=0.552;AC=51;AF=0.911;AN=56;BaseQRankSum=-4.956;DP=521;FS=13.722;HRun=10;HaplotypeScore=53.3981;InbreedingCoeff=0.7260;MQ=63.52;MQ0=8;MQRankSum=-1.413;QD=19.74;ReadPosRankSum=3.489;VQSLOD=4.5807;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,1:37:63.56:320,64,0	1/1:2,11:14:35.55:344,36,0	0/0:19,0:11:28.71:0,29,207	0/0:23,0:12:7.93:0,8,99	1/1:5,23:28:66.13:691,66,0	0/1:3,13:15:7.36:313,0,7	1/1:5,18:22:26.48:487,26,0	1/1:3,22:25:66.17:702,66,0	1/1:5,14:19:30.96:322,31,0	1/1:2,15:17:23.45:441,23,0	1/1:7,14:21:8.50:295,9,0	1/1:1,10:11:24.06:256,24,0	1/1:2,14:16:33.07:345,33,0	1/1:3,4:7:18:178,18,0	1/1:4,8:12:15.04:160,15,0	1/1:2,1:19:28.46:160,28,0	1/1:4,15:19:14.45:359,14,0	1/1:2,13:15:33.08:352,33,0	1/1:1,17:18:53.93:543,54,0	1/1:7,15:22:45.11:480,45,0	1/1:2,8:10:21.03:212,21,0	1/1:3,9:12:21.05:223,21,0	1/1:4,7:11:17.74:191,18,0	1/1:1,21:22:45.11:475,45,0	1/1:6,14:20:33.08:352,33,0	1/1:5,16:22:50.96:510,51,0	1/1:8,19:28:44.10:450,44,0	1/1:1,12:13:27:274,27,0
chr10	96792838	.	ACAGACTGAGG	A	11090.83	PASS	AB=0.814;AC=44;AF=0.786;AN=56;BaseQRankSum=-5.336;DP=665;FS=5.349;HRun=0;HaplotypeScore=195.7249;InbreedingCoeff=0.0846;MQ=66.33;MQ0=20;MQRankSum=-1.279;QD=18.64;ReadPosRankSum=-0.725;VQSLOD=3.7383;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:2,47:49:38.19:200,0,38	1/1:0,4:4:4.26:184,4,0	0/0:65,0:30:40.52:0,41,582	0/1:103,0:51:10.43:10,0,481	1/1:0,17:17:2.97:80,3,0	1/1:0,13:13:12.04:417,12,0	1/1:2,20:22:8.89:141,9,0	1/1:16,27:42:86.89:973,87,0	1/1:1,18:19:16.30:623,16,0	1/1:1,14:14:39.07:988,39,0	0/1:0,12:12:0:0,0,0	1/1:0,11:11:15.05:492,15,0	1/1:0,17:17:9.03:257,9,0	1/1:0,20:20:20.98:703,21,0	1/1:1,17:18:9.03:177,9,0	1/1:0,19:18:24.08:817,24,0	1/1:1,24:25:9.03:288,9,0	1/1:2,10:12:15.05:411,15,0	0/1:25,0:21:64.13:482,0,64	0/1:10,0:10:49.37:119,0,49	0/1:39,0:38:99:471,0,143	0/0:0,5:5:0:0,0,0	0/1:0,5:5:0.13:0,0,0	1/1:3,24:27:0.18:100,0,0	1/1:3,3:6:3.99:113,4,0	1/1:0,25:25:75.24:1982,75,0	0/1:26,0:26:99:593,0,232	1/1:12,0:12:0.75:470,1,0
chr10	96792843	.	CTG	C	4927.75	PASS	AB=0.876;AC=40;AF=0.714;AN=56;BaseQRankSum=6.018;DP=677;FS=5.474;HRun=0;HaplotypeScore=172.5898;InbreedingCoeff=0.1305;MQ=65.84;MQ0=22;MQRankSum=-0.580;QD=10.02;ReadPosRankSum=5.120;VQSLOD=4.1967;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:49,0:49:19.82:20,0,40	1/1:4,0:4:5.79:59,6,0	0/0:70,0:32:65.79:0,66,1173	0/0:109,0:53:36.56:0,37,976	1/1:17,0:17:2.97:43,3,0	1/1:13,0:13:11.42:59,11,0	0/1:22,0:22:5.98:6,0,20	0/1:41,2:42:99:386,0,778	1/1:18,0:18:16.98:86,17,0	0/1:15,0:14:37.16:174,0,37	0/1:13,0:12:0:0,0,0	1/1:11,0:11:14.45:91,14,0	1/1:17,0:17:8.69:59,9,0	1/1:20,0:20:20.07:155,20,0	1/1:18,0:18:5.03:33,5,0	1/1:19,0:18:20.40:103,20,0	1/1:24,1:25:8.62:73,9,0	0/1:12,0:12:38.30:38,0,118	0/1:12,13:21:99:539,0,247	0/1:1,9:10:21.83:199,0,22	0/1:15,24:38:36.53:857,0,37	0/0:6,0:6:2.90:0,3,21	0/1:5,0:5:0:0,0,0	1/1:28,0:28:2.78:15,3,0	1/1:5,1:6:5.79:57,6,0	1/1:25,0:25:44.09:555,44,0	1/1:0,25:25:63.21:923,63,0	1/1:1,12:13:27.08:397,27,0
chr10	96793254	.	AAAGAGCAGAAAAACC	A	25923.33	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=16.859;DP=572;FS=7.408;HRun=0;HaplotypeScore=249.1468;InbreedingCoeff=0.9960;MQ=82.25;MQ0=1;MQRankSum=-16.322;QD=81.26;ReadPosRankSum=5.511;VQSLOD=3.5431;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,129,9333	1/1:1,6:7:18.06:705,18,0	0/0:20,0:20:54.11:0,54,3189	0/0:23,0:23:69.22:0,69,3791	1/1:3,15:17:33.11:1316,33,0	1/1:4,16:19:30.10:1261,30,0	1/1:9,10:18:24.08:1056,24,0	0/0:29,0:29:69.23:0,69,4323	1/1:4,13:16:33.11:1452,33,0	1/1:4,20:24:60.18:2219,60,0	1/1:4,21:25:57.20:2462,57,0	1/1:3,19:21:45.15:1980,45,0	1/1:2,9:11:24.08:1056,24,0	1/1:1,13:14:30.10:1320,30,0	1/1:6,25:31:57.20:2465,57,0	0/0:25,0:23:63.20:0,63,4152	1/1:7,17:24:42.14:1740,42,0	1/1:6,11:17:24.08:1056,24,0	0/0:21,0:21:63.20:0,63,3897	0/0:21,0:21:60.21:0,60,4180	0/0:30,0:30:81.28:0,81,5494	1/1:2,9:11:27.09:1127,27,0	1/1:2,11:13:27.09:1096,27,0	1/1:3,14:17:27.30:1125,27,0	1/1:4,7:11:18.06:792,18,0	1/1:3,15:18:42.14:1693,42,0	0/0:25,0:25:75.26:0,75,5210	0/0:13,0:13:36.12:0,36,2623
chr10	96793481	.	C	CAA	3909.73	PASS	AB=0.937;AC=27;AF=0.482;AN=56;BaseQRankSum=-10.298;DP=521;FS=4.129;HRun=11;HaplotypeScore=97.8234;InbreedingCoeff=0.3076;MQ=64.57;MQ0=3;MQRankSum=-1.982;QD=11.37;ReadPosRankSum=-4.532;VQSLOD=1.4242;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,1:32:26.82:186,27,0	0/0:4,0:4:2.60:0,3,6	0/0:21,0:14:27.65:0,28,209	0/0:20,0:15:1.18:0,1,72	0/1:26,0:26:21.08:23,0,21	0/0:23,0:23:12.84:0,13,35	0/1:13,0:13:14.09:20,0,14	1/1:10,19:34:73.76:792,74,0	0/0:11,0:11:4.43:0,4,10	1/1:24,0:24:3.33:78,3,0	0/1:21,0:21:8.29:32,0,8	1/1:16,0:16:16:146,16,0	0/0:12,0:12:3.37:0,3,11	0/0:11,0:11:3.11:0,3,6	0/0:20,0:20:3.52:0,4,8	0/1:5,0:22:6.84:75,0,7	0/1:26,0:26:8.96:28,0,9	0/1:18,0:18:7.53:121,0,8	1/1:5,17:25:68.11:831,68,0	1/1:7,12:20:36.07:466,36,0	1/1:2,4:6:9.02:113,9,0	1/1:3,0:3:2.03:32,2,0	0/0:16,0:16:1.28:0,1,4	0/0:12,0:12:8.41:0,8,26	0/0:19,0:19:10.58:0,11,27	0/1:20,0:20:14.31:19,0,14	1/1:15,8:22:48.40:549,48,0	1/1:0,12:13:29.59:400,30,0
chr10	96793491	.	AAG	A	3147.85	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-2.328;DP=542;FS=0.786;HRun=0;HaplotypeScore=92.1677;InbreedingCoeff=0.7203;MQ=68.57;MQ0=5;MQRankSum=0.526;QD=8.77;ReadPosRankSum=-2.069;VQSLOD=2.8570;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:72.11:0,72,731	1/1:5,0:5:11.49:61,11,0	0/0:35,0:18:36.02:0,36,457	0/1:28,0:16:4.75:5,0,233	1/1:23,2:25:44.76:319,45,0	1/1:22,0:22:20.23:135,20,0	0/1:14,0:14:0.83:159,0,1	0/1:39,0:39:58:58,0,666	1/1:10,0:10:14.16:68,14,0	1/1:24,0:24:50.89:319,51,0	1/1:19,0:19:39.76:249,40,0	1/1:19,0:19:38.04:326,38,0	1/1:10,0:10:5.83:37,6,0	1/1:10,0:10:11.51:63,12,0	1/1:18,0:18:11.36:55,11,0	0/0:24,0:23:27.72:0,28,297	1/1:28,0:28:51.54:314,52,0	1/1:13,3:16:43.52:376,44,0	0/0:32,0:31:1.95:0,2,704	0/0:22,0:22:43.08:0,43,424	0/0:5,0:5:8.93:0,9,72	1/1:5,0:5:8.81:66,9,0	1/1:13,0:13:12.30:61,12,0	1/1:16,0:16:10.57:126,11,0	1/1:13,2:15:28.86:197,29,0	1/1:21,2:23:43.89:353,44,0	0/0:23,0:22:43.21:0,43,489	0/0:11,0:11:30.03:0,30,277
chr10	96793492	.	AG	A	6523.33	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-6.151;DP=534;FS=2.184;HRun=1;HaplotypeScore=72.3249;InbreedingCoeff=0.8399;MQ=67.92;MQ0=5;MQRankSum=0.479;QD=20.45;ReadPosRankSum=-1.260;VQSLOD=4.6713;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:70.32:0,70,455	1/1:0,5:5:12:145,12,0	0/0:34,1:18:16.04:0,16,306	0/1:26,0:15:25.61:26,0,183	1/1:11,14:25:66.25:727,66,0	1/1:1,21:22:33.58:456,34,0	1/1:13,2:15:36.49:308,36,0	0/0:34,2:36:19.13:0,19,491	1/1:0,10:10:15.05:207,15,0	1/1:0,24:24:54.03:597,54,0	1/1:1,18:19:50.72:476,51,0	1/1:15,4:19:55.83:550,56,0	1/1:1,9:10:5.95:59,6,0	1/1:0,10:10:12.04:166,12,0	1/1:0,18:18:12.04:166,12,0	0/0:23,0:23:3.83:0,4,174	1/1:18,10:28:71.90:745,72,0	1/1:16,0:16:41.73:346,42,0	0/0:30,1:30:45.02:0,45,567	0/0:20,0:20:49.57:0,50,327	0/0:5,0:5:8.70:0,9,48	1/1:0,5:5:8.97:94,9,0	1/1:0,13:13:13.34:146,13,0	1/1:11,5:16:33.24:345,33,0	1/1:2,13:15:29.98:351,30,0	1/1:3,20:23:60.85:613,61,0	0/0:22,0:21:27.40:0,27,339	0/0:12,0:12:31.82:0,32,178
chr10	96793682	.	TA	T	2645.14	PASS	AB=0.972;AC=14;AF=0.250;AN=56;BaseQRankSum=7.342;DP=532;FS=0.835;HRun=9;HaplotypeScore=60.4023;InbreedingCoeff=0.8041;MQ=75.35;MQ0=3;MQRankSum=-1.525;QD=16.03;ReadPosRankSum=-2.658;VQSLOD=3.1876;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:52.28:0,52,326	0/0:5,0:5:15.04:0,15,165	0/0:27,0:14:12.89:0,13,160	0/1:16,1:12:18.48:18,0,49	0/0:23,0:23:54.15:0,54,615	0/0:21,0:21:57.17:0,57,660	0/0:18,1:19:29.68:0,30,576	1/1:10,29:39:87.03:796,87,0	0/0:16,0:16:45.08:0,45,495	0/0:20,0:20:54.14:0,54,605	0/0:25,0:25:54.14:0,54,606	0/0:11,0:11:27.06:0,27,294	0/0:8,0:8:18.04:0,18,198	0/0:17,0:17:48.04:0,48,506	0/0:19,0:19:51.12:0,51,562	0/1:16,0:16:13.94:14,0,111	0/0:25,0:25:69.15:0,69,764	0/0:13,0:13:33.04:0,33,356	1/1:1,18:19:53.97:481,54,0	1/1:4,16:20:47.93:425,48,0	1/1:1,12:14:29.05:253,29,0	0/0:10,0:10:21.05:0,21,233	0/0:8,0:8:21.06:0,21,243	0/0:13,0:14:35.93:0,36,365	0/0:24,0:24:69.20:0,69,790	0/0:32,0:32:75.19:0,75,835	1/1:3,18:21:51.02:466,51,0	1/1:3,16:19:42.02:384,42,0
chr10	96793987	.	CGTGT	C	4032.54	PASS	AB=0.807;AC=30;AF=0.536;AN=56;BaseQRankSum=-0.389;DP=581;FS=20.541;HRun=0;HaplotypeScore=115.6493;InbreedingCoeff=0.3710;MQ=63.16;MQ0=14;MQRankSum=2.239;QD=10.56;ReadPosRankSum=-0.873;VQSLOD=1.6710;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:8.97:0,9,71	0/0:8,0:11:9.49:0,9,87	0/0:36,0:24:11.91:0,12,103	0/0:24,0:17:2.68:0,3,11	1/1:18,7:26:2.98:244,3,0	1/1:14,5:20:21.95:310,22,0	1/1:19,6:25:6.13:276,6,0	0/0:25,0:25:10.79:0,11,78	0/1:6,7:13:0.76:110,0,1	1/1:18,9:27:24.27:305,24,0	0/1:10,7:18:37.56:89,0,38	1/1:10,5:14:3.01:47,3,0	0/1:7,5:12:0.94:130,0,1	1/1:6,7:13:7.27:97,7,0	1/1:7,4:12:22.87:293,23,0	0/1:19,0:19:12.95:77,0,13	1/1:11,11:23:27.56:404,28,0	0/0:13,0:24:24.51:0,25,403	0/0:23,0:22:6.48:0,6,66	0/1:15,0:15:35.95:36,0,50	0/0:18,0:17:5.06:0,5,40	0/1:7,7:15:6.87:179,0,7	1/1:10,9:21:13.86:167,14,0	1/1:5,13:19:21.07:331,21,0	1/1:14,6:24:30.08:412,30,0	0/1:27,12:40:0.78:471,0,1	0/1:22,0:22:55.35:55,0,66	0/0:10,0:9:15.03:0,15,178
chr10	96794018	.	GTGTGTGTGTT	G	809.26	PASS	AB=1.000;AC=9;AF=0.173;AN=52;BaseQRankSum=-2.213;DP=603;FS=21.764;HRun=0;HaplotypeScore=176.4933;InbreedingCoeff=0.7777;MQ=60.31;MQ0=20;MQRankSum=-3.157;QD=9.87;ReadPosRankSum=-2.911;VQSLOD=0.5271;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:9,0:8:14.83:0,15,390	0/0:36,0:19:10.62:0,11,360	0/0:43,0:22:29.41:0,29,306	0/0:23,0:22:38.73:0,39,612	0/0:15,0:15:41.94:0,42,571	0/0:29,0:29:63.23:0,63,1024	1/1:15,0:15:23.83:202,24,0	0/0:16,0:16:26.97:0,27,406	0/0:20,0:20:44.63:0,45,563	0/0:18,0:18:27.05:0,27,412	0/0:15,0:14:18.50:0,19,246	0/0:12,0:12:21.02:0,21,356	0/0:10,0:10:8.89:0,9,143	0/0:18,0:17:48.34:0,48,750	0/0:17,0:17:9.65:0,10,125	0/0:32,0:32:74.85:0,75,974	0/0:23,0:23:41.45:0,41,1154	1/1:12,0:10:20.85:161,21,0	1/1:4,11:15:6.02:188,6,0	./.	0/0:17,0:17:36.45:0,36,554	0/0:19,0:20:30.32:0,30,354	0/0:28,0:28:48.01:0,48,723	0/0:22,0:21:48.92:0,49,766	0/0:34,0:34:62.83:0,63,1179	1/1:9,15:24:9.73:283,10,0	0/1:16,0:15:60.12:126,0,60
chr10	96794022	.	GTGTGTT	G	1100.53	PASS	AB=1.000;AC=22;AF=0.423;AN=52;BaseQRankSum=0.476;DP=588;FS=1.641;HRun=0;HaplotypeScore=137.4128;InbreedingCoeff=-0.0190;MQ=63.78;MQ0=18;MQRankSum=-3.155;QD=3.81;ReadPosRankSum=-1.819;VQSLOD=2.2927;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/1:8,0:7:31.76:32,0,172	0/0:38,0:24:6.29:0,6,353	0/0:43,0:22:35.58:0,36,364	0/1:22,0:21:5.83:6,0,236	0/1:14,0:14:37.85:38,0,154	0/0:29,0:29:2.26:0,2,401	1/1:15,0:15:29.09:234,29,0	0/1:16,0:16:12.84:13,0,177	0/1:19,0:19:52.66:53,0,171	0/0:20,0:20:29.29:0,29,261	0/0:16,0:15:24.86:0,25,206	0/0:11,0:11:19.72:0,20,120	0/1:9,0:9:13.70:14,0,37	0/1:18,0:17:87.01:87,0,226	1/1:3,15:18:11.50:119,11,0	0/0:33,0:33:0.35:0,0,406	0/0:22,0:22:28.02:0,28,717	1/1:10,0:8:9.39:150,9,0	1/1:15,0:15:6.02:95,6,0	./.	0/1:19,0:19:3.45:3,0,272	0/1:19,0:19:46.40:46,0,110	0/0:28,0:28:44.85:0,45,288	0/1:23,0:22:71.89:72,0,239	0/1:26,0:26:39.51:40,0,377	1/1:22,0:22:9.18:143,9,0	0/1:16,0:15:57.47:124,0,57
chr10	96794024	.	GTGTT	G	2352.75	PASS	AB=0.994;AC=27;AF=0.519;AN=52;BaseQRankSum=7.779;DP=581;FS=17.166;HRun=0;HaplotypeScore=114.9733;InbreedingCoeff=-0.3692;MQ=65.88;MQ0=16;MQRankSum=-1.111;QD=5.81;ReadPosRankSum=5.331;VQSLOD=1.0214;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:8,0:7:28.85:29,0,98	0/0:36,0:23:6.49:0,6,318	0/0:44,0:23:39.58:0,40,399	0/1:20,0:19:72.22:72,0,152	0/1:13,1:14:99:181,0,107	0/1:28,0:28:99:126,0,274	1/1:15,0:15:34.20:285,34,0	0/1:17,0:17:28.73:29,0,155	0/1:18,0:18:99:147,0,158	0/1:20,0:20:9.56:10,0,187	0/0:15,0:14:4.67:0,5,175	0/1:11,0:11:47.99:48,0,69	0/1:10,0:10:38.99:57,0,39	0/1:18,0:17:99:129,0,163	1/1:16,2:18:11.92:175,12,0	0/1:32,1:33:99:182,0,335	0/0:23,0:23:33.76:0,34,556	1/1:11,0:9:11.78:177,12,0	1/1:15,0:15:6.02:67,6,0	./.	0/1:20,0:20:69.29:69,0,212	0/1:18,0:18:81.12:108,0,81	0/1:28,0:28:99:111,0,192	0/1:23,0:22:99:124,0,162	0/1:26,0:26:99:165,0,201	1/1:19,0:19:8.68:101,9,0	0/1:15,0:15:37.06:124,0,37
chr10	96795253	.	G	GA	1576.79	PASS	AB=1.000;AC=40;AF=0.741;AN=54;BaseQRankSum=0.260;DP=265;FS=8.412;HRun=8;HaplotypeScore=58.6101;InbreedingCoeff=0.4426;MQ=81.56;MQ0=3;MQRankSum=-2.749;QD=7.20;ReadPosRankSum=1.799;VQSLOD=0.3762;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:31.50:31,0,96	1/1:2,0:2:2.84:14,3,0	0/1:11,0:10:4.50:5,0,36	0/0:18,0:14:16.90:0,17,119	1/1:10,0:10:11.36:56,11,0	1/1:11,0:11:16.02:75,16,0	0/0:5,0:5:4.07:0,4,11	1/1:27,4:29:59.56:505,60,0	1/1:4,0:4:2.84:14,3,0	1/1:7,0:7:4.87:26,5,0	1/1:6,0:6:2.19:36,2,0	0/0:5,0:5:3.63:0,4,9	1/1:4,0:4:2.84:14,3,0	1/1:8,0:8:2.74:12,3,0	0/0:5,0:5:1.74:0,2,5	1/1:2,0:2:1.82:5,2,0	1/1:15,0:15:25.69:131,26,0	1/1:14,0:14:14.20:70,14,0	1/1:10,2:11:26.66:187,27,0	1/1:4,2:6:8.93:74,9,0	1/1:6,1:7:13.29:110,13,0	0/0:4,0:4:1.81:0,2,5	./.	1/1:7,0:7:2.84:14,3,0	1/1:11,0:12:16.38:76,16,0	0/0:5,0:5:7.97:0,8,26	1/1:15,3:18:35.64:267,36,0	1/1:5,0:5:0.47:1,0,0
chr10	96795260	.	A	AAAT	4766.03	PASS	AB=0.863;AC=41;AF=0.759;AN=54;BaseQRankSum=-2.080;DP=239;FS=21.980;HRun=0;HaplotypeScore=52.2102;InbreedingCoeff=0.3163;MQ=70.93;MQ0=3;MQRankSum=-2.519;QD=22.17;ReadPosRankSum=2.875;VQSLOD=2.5929;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:23:99:231,0,100	1/1:1,0:2:3.01:40,3,0	0/1:6,0:5:10.49:10,0,56	0/0:16,0:12:22.30:0,22,183	1/1:2,0:10:15.05:197,15,0	1/1:0,0:9:18.06:230,18,0	0/0:2,0:2:4.07:0,4,11	1/1:10,21:30:64.77:1119,65,0	1/1:1,0:6:6.02:77,6,0	1/1:0,0:7:7.93:100,8,0	1/1:4,0:7:3.22:93,3,0	0/0:2,0:2:3.63:0,4,9	1/1:1,0:4:3.01:40,3,0	1/1:0,0:7:3.01:38,3,0	0/0:2,0:2:1.74:0,2,5	1/1:0,0:2:2.97:20,3,0	1/1:1,0:13:30.06:398,30,0	1/1:4,0:17:18.06:247,18,0	1/1:4,12:15:35.41:675,35,0	1/1:3,2:5:5.31:85,5,0	1/1:4,3:7:14.30:219,14,0	0/0:1,0:1:1.82:0,2,5	./.	1/1:1,0:4:3.01:40,3,0	1/1:1,0:13:18.06:235,18,0	0/1:6,0:6:14.86:15,0,15	1/1:4,10:16:28.78:618,29,0	1/1:0,3:3:3.01:38,3,0
chr10	96795553	.	A	AGT	2192.43	PASS	AB=0.892;AC=39;AF=0.722;AN=54;BaseQRankSum=-1.231;DP=576;FS=13.217;HRun=0;HaplotypeScore=147.2294;InbreedingCoeff=-0.1325;MQ=48.35;MQ0=27;MQRankSum=-0.421;QD=4.02;ReadPosRankSum=-2.244;VQSLOD=1.9003;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,9:32:2.74:13,3,0	0/1:3,1:3:0:0,0,0	0/0:21,0:14:4.96:0,5,19	0/1:10,0:7:8.43:8,0,9	./.	0/1:18,3:17:40.08:58,0,40	0/1:23,1:24:7.12:20,0,7	1/1:24,0:23:1.69:95,2,0	1/1:17,2:19:3.95:81,4,0	1/1:30,0:29:27.35:215,27,0	1/1:12,3:13:2.98:22,3,0	0/1:27,2:27:4.36:168,0,4	1/1:8,9:15:0.47:1,0,0	0/1:23,2:20:1.18:83,0,1	0/1:30,3:32:1.60:201,0,2	0/1:27,1:25:25.25:112,0,25	0/1:20,1:20:9.03:146,0,9	1/1:13,10:20:0.29:173,0,0	1/1:20,3:22:2.39:100,2,0	1/1:12,0:10:4.27:52,4,0	1/1:24,2:22:23.90:223,24,0	0/1:10,10:18:0:0,0,0	0/1:12,0:12:6.49:47,0,6	1/1:23,2:18:10.49:70,10,0	1/1:10,1:9:0.47:1,0,0	0/1:20,2:22:21.60:264,0,22	0/1:15,10:25:23.20:120,0,23	1/1:9,0:8:5.95:43,6,0
chr10	96795582	.	GTC	G	755.98	PASS	AB=0.921;AC=22;AF=0.393;AN=56;BaseQRankSum=4.030;DP=613;FS=15.213;HRun=0;HaplotypeScore=133.5568;InbreedingCoeff=-0.4407;MQ=44.48;MQ0=25;MQRankSum=-1.580;QD=1.68;ReadPosRankSum=-1.274;VQSLOD=1.7169;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:29:20.95:167,21,0	0/1:6,0:5:17.99:19,0,18	0/0:8,0:3:4.96:0,5,19	0/1:10,0:5:0.08:0,0,47	0/0:15,0:14:11.98:0,12,99	0/1:19,1:16:2.44:2,0,142	0/0:32,2:34:23.56:0,24,342	0/1:24,4:27:37.50:37,0,284	0/0:23,0:22:32.15:0,32,333	0/1:27,1:27:67.14:67,0,239	0/1:13,4:14:13.01:13,0,41	0/1:27,3:28:6.76:7,0,185	0/1:19,0:16:11.30:11,0,62	0/0:24,2:21:25.54:0,26,231	0/1:29,0:29:55.88:56,0,209	0/1:29,1:27:14.86:15,0,317	0/1:23,1:23:17.46:187,0,17	0/1:29,0:26:11.94:12,0,236	0/1:21,0:18:15.90:16,0,179	0/1:10,3:11:39.72:42,0,40	0/1:24,5:25:99:134,0,229	0/0:26,0:24:17.88:0,18,148	0/1:11,2:13:23.36:23,0,72	0/1:25,7:25:16.27:16,0,197	0/1:10,2:12:9.94:10,0,85	0/1:20,1:21:53.37:53,0,237	0/0:31,0:29:41.41:0,41,303	0/1:7,2:8:24.93:25,0,71
chr10	96796088	.	T	TCC	7644.23	PASS	AB=0.565;AC=51;AF=0.911;AN=56;BaseQRankSum=-5.836;DP=431;FS=5.667;HRun=9;HaplotypeScore=67.6800;InbreedingCoeff=0.6563;MQ=86.88;MQ0=0;MQRankSum=-3.911;QD=19.60;ReadPosRankSum=3.548;VQSLOD=3.2606;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,1:28:13.30:133,13,0	1/1:0,3:4:11.53:139,12,0	0/0:22,0:20:2.48:0,2,198	0/0:19,0:19:15.38:0,15,157	1/1:6,5:11:9.03:127,9,0	1/1:1,16:18:32.60:464,33,0	1/1:8,9:17:18.06:277,18,0	1/1:9,7:20:23.54:290,24,0	1/1:7,9:17:23.57:328,24,0	1/1:2,9:11:24.02:301,24,0	1/1:6,20:29:37.97:475,38,0	1/1:4,10:14:14.92:231,15,0	1/1:1,8:9:15.05:230,15,0	1/1:3,8:11:24.08:361,24,0	1/1:2,12:14:21.07:323,21,0	1/1:3,1:7:14.52:139,15,0	1/1:8,16:26:34.88:479,35,0	1/1:3,17:20:29.59:424,30,0	1/1:5,5:12:21.04:262,21,0	1/1:1,6:8:14.96:178,15,0	1/1:9,6:17:19.31:280,19,0	1/1:2,8:12:17.03:201,17,0	0/1:3,9:13:1.95:169,0,2	1/1:3,11:14:18.06:277,18,0	1/1:2,7:9:15.05:231,15,0	1/1:3,8:12:26.57:351,27,0	1/1:4,20:25:42.06:641,42,0	1/1:3,8:12:23.67:333,24,0
chr10	96796691	.	A	ATTACTAC	49426.09	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.256;DP=601;FS=2.240;HRun=0;HaplotypeScore=123.2810;InbreedingCoeff=0.9980;MQ=73.29;MQ0=0;MQRankSum=-9.707;QD=88.26;ReadPosRankSum=4.879;VQSLOD=5.6260;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,26:46:99:3597,99,0	1/1:2,6:8:24.08:909,24,0	0/0:21,0:21:54.15:0,54,1145	0/0:20,0:20:47.89:0,48,1087	1/1:10,9:20:45.15:1621,45,0	1/1:4,10:15:42.14:1637,42,0	1/1:13,12:26:69.24:2558,69,0	1/1:14,17:33:81.25:2906,81,0	1/1:8,18:27:63.22:2392,63,0	1/1:11,12:24:57.20:2042,57,0	1/1:7,10:17:42.14:1418,42,0	1/1:7,14:23:60.21:2269,60,0	1/1:6,14:23:48.16:1856,48,0	1/1:12,11:26:54.19:1999,54,0	1/1:5,15:22:54.19:2080,54,0	1/1:8,15:23:60.21:2261,60,0	1/1:5,10:16:39.13:1532,39,0	1/1:2,12:15:39.13:1548,39,0	1/1:8,8:21:63.16:2066,63,0	1/1:5,11:18:38.67:1547,39,0	1/1:10,7:21:33.11:1288,33,0	1/1:4,14:19:45.15:1686,45,0	1/1:7,7:15:33.11:1250,33,0	1/1:5,12:19:39.13:1502,39,0	1/1:4,8:12:27.09:1075,27,0	1/1:7,15:26:72.25:2467,72,0	1/1:8,12:23:60.20:2182,60,0	1/1:10,12:22:48.16:1739,48,0
chr10	96796987	.	G	GGGAT	2864.85	PASS	AB=1.000;AC=46;AF=0.885;AN=52;BaseQRankSum=-1.569;DP=216;FS=6.813;HRun=0;HaplotypeScore=63.8471;InbreedingCoeff=0.4332;MQ=77.52;MQ0=0;MQRankSum=-1.830;QD=15.65;ReadPosRankSum=2.453;VQSLOD=2.0211;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:19.94:100,20,0	./.	0/0:13,0:6:13.93:0,14,146	0/0:17,0:12:20.01:0,20,344	1/1:5,0:5:2.94:66,3,0	1/1:4,0:4:5.27:45,5,0	1/1:14,0:14:23.30:222,23,0	1/1:10,0:10:21.19:130,21,0	1/1:7,0:7:17.09:126,17,0	1/1:8,0:8:15.01:179,15,0	1/1:3,0:3:2.88:16,3,0	0/1:13,0:12:6.19:332,0,6	1/1:3,0:3:9.02:137,9,0	1/1:5,0:6:7.63:147,8,0	1/1:6,0:6:11.94:125,12,0	1/1:7,0:6:14.33:86,14,0	0/1:11,0:11:3.71:147,0,4	1/1:2,0:2:5.72:29,6,0	1/1:9,0:9:19.70:147,20,0	1/1:6,0:6:11.74:62,12,0	1/1:24,0:24:42.31:175,42,0	./.	1/1:6,0:6:9.03:203,9,0	1/1:5,0:5:8.91:115,9,0	1/1:4,4:8:8.82:147,9,0	1/1:6,0:6:14.61:139,15,0	1/1:3,0:3:8.02:34,8,0	1/1:8,0:8:21.38:88,21,0
chr10	96796988	.	G	GTA	2778.74	PASS	AB=1.000;AC=39;AF=0.750;AN=52;BaseQRankSum=-2.238;DP=211;FS=21.066;HRun=0;HaplotypeScore=54.0574;InbreedingCoeff=0.0454;MQ=78.04;MQ0=0;MQRankSum=-0.911;QD=15.61;ReadPosRankSum=3.946;VQSLOD=1.6943;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:9:5.29:44,0,5	./.	0/0:13,0:6:15.87:0,16,155	0/0:18,0:12:11.81:0,12,254	1/1:5,0:5:2.86:19,3,0	1/1:4,0:4:2.47:9,2,0	0/1:14,0:14:19.75:43,0,20	1/1:4,7:12:18.06:310,18,0	0/1:7,0:7:8.48:27,0,8	0/1:8,0:8:13.64:31,0,14	1/1:4,0:4:1.96:6,2,0	0/1:13,0:12:43.28:59,0,43	1/1:2,0:2:5.58:32,6,0	0/1:6,0:6:12.37:23,0,12	0/1:5,0:5:6.16:8,0,6	1/1:7,0:6:10.19:51,10,0	0/1:10,0:10:18.88:19,0,65	1/1:2,0:2:4.83:19,5,0	1/1:0,6:6:18.06:301,18,0	1/1:0,6:6:18.06:309,18,0	1/1:0,24:25:51.17:902,51,0	./.	1/1:6,0:6:8.83:56,9,0	1/1:5,0:5:7.69:39,8,0	1/1:5,0:5:5.76:29,6,0	0/1:6,0:6:1.20:12,0,1	1/1:0,3:3:9.03:157,9,0	1/1:0,8:8:24.08:421,24,0
chr10	96796989	.	G	GAT	5990.16	PASS	AB=0.642;AC=40;AF=0.769;AN=52;BaseQRankSum=-6.398;DP=214;FS=12.694;HRun=0;HaplotypeScore=43.0394;InbreedingCoeff=0.0424;MQ=75.53;MQ0=0;MQRankSum=-0.367;QD=32.91;ReadPosRankSum=3.396;VQSLOD=5.9379;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:21.07:391,21,0	./.	0/0:13,0:6:15.89:0,16,189	0/0:17,0:11:16.37:0,16,286	1/1:4,1:5:2.89:55,3,0	1/1:1,3:4:5.31:110,5,0	0/1:4,8:14:31.55:263,0,32	1/1:17,1:18:42.10:615,42,0	0/1:1,6:7:14.05:240,0,14	1/1:1,6:7:15.05:258,15,0	0/1:2,2:4:10.66:50,0,11	0/1:3,6:10:48.92:256,0,49	1/1:0,2:2:6.02:90,6,0	0/1:3,3:6:18.39:181,0,18	0/1:2,3:5:5.55:107,0,6	1/1:1,6:6:15.05:279,15,0	0/1:4,5:9:45.12:224,0,45	1/1:0,2:2:6.02:111,6,0	1/1:8,0:8:21.07:362,21,0	1/1:7,0:7:18.06:305,18,0	1/1:26,0:26:51.17:883,51,0	./.	1/1:1,5:6:9.03:165,9,0	1/1:1,4:5:0.27:146,0,0	0/1:4,1:5:9.31:114,0,9	1/1:1,4:5:6.36:202,6,0	1/1:3,0:3:9.03:160,9,0	1/1:8,0:8:24.08:423,24,0
chr10	96796993	.	C	CGG	1274.48	PASS	AB=0.833;AC=31;AF=0.574;AN=54;BaseQRankSum=-2.315;DP=217;FS=3.820;HRun=9;HaplotypeScore=61.3974;InbreedingCoeff=0.7003;MQ=74.67;MQ0=0;MQRankSum=-2.982;QD=13.14;ReadPosRankSum=-4.531;VQSLOD=0.2705;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:20.95:0,21,210	./.	0/0:12,0:6:11.94:0,12,102	0/0:16,0:11:3.52:0,4,24	1/1:5,1:6:11.95:123,12,0	1/1:3,1:4:0.47:1,0,0	1/1:9,3:12:15.88:182,16,0	0/0:19,0:19:35.70:0,36,351	1/1:5,1:6:10.67:78,11,0	1/1:9,0:9:6.01:54,6,0	1/1:4,0:4:6.01:55,6,0	1/1:7,2:8:8.09:124,8,0	1/1:0,2:2:6.02:94,6,0	1/1:5,0:6:11.99:121,12,0	1/1:6,1:7:11.99:131,12,0	0/0:6,0:5:11.97:0,12,117	0/1:8,1:10:3.59:76,0,4	0/0:2,0:2:0.46:0,0,1	0/0:9,0:9:24:0,24,231	0/0:7,0:7:15.87:0,16,154	0/0:28,0:28:50.45:0,50,526	1/1:2,0:2:3.01:45,3,0	1/1:2,3:5:9.03:140,9,0	1/1:3,1:4:6.02:82,6,0	1/1:5,1:6:11.98:117,12,0	1/1:5,0:5:3.01:39,3,0	0/0:3,0:3:9.02:0,9,94	0/0:8,0:8:23.94:0,24,215
chr10	96797653	.	TA	T	2960.24	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=2.459;DP=676;FS=6.077;HRun=10;HaplotypeScore=103.6459;InbreedingCoeff=0.9529;MQ=75.00;MQ0=0;MQRankSum=-1.571;QD=18.86;ReadPosRankSum=-0.325;VQSLOD=3.4414;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:40:82.41:0,82,426	0/0:10,0:10:18.03:0,18,185	0/0:19,0:16:17.53:0,18,138	0/0:17,1:17:0.49:0,0,178	0/0:26,0:26:63.14:0,63,678	0/0:24,0:24:63.14:0,63,680	0/0:20,0:20:60.11:0,60,636	1/1:8,27:35:80.94:694,81,0	0/0:26,0:26:72.18:0,72,788	0/0:25,0:25:75.18:0,75,809	0/0:20,0:20:41.72:0,42,464	0/0:25,0:25:51.06:0,51,541	0/0:28,0:30:78.09:0,78,799	0/0:19,0:19:39.11:0,39,431	0/0:25,0:25:66.12:0,66,695	0/0:7,0:24:42.76:0,43,223	0/0:19,0:20:47.93:0,48,491	1/1:0,12:12:29.99:260,30,0	1/1:5,12:17:35.94:303,36,0	1/1:3,21:24:59.97:521,60,0	1/1:5,19:24:50.98:441,51,0	0/0:27,0:27:71.39:0,71,762	0/0:29,0:30:75.01:0,75,794	0/0:27,0:27:72.14:0,72,767	0/0:28,2:30:55.10:0,55,814	0/0:33,1:34:70.20:0,70,995	1/1:2,26:28:62.97:547,63,0	1/1:1,16:17:44.98:391,45,0
chr10	96798196	.	AT	A	4892.84	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-0.119;DP=634;FS=9.689;HRun=3;HaplotypeScore=107.7642;InbreedingCoeff=0.9809;MQ=84.66;MQ0=0;MQRankSum=-2.381;QD=32.62;ReadPosRankSum=-0.830;VQSLOD=3.5994;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1465	0/0:8,0:8:23.66:0,24,156	0/0:26,0:26:68.47:0,68,890	0/0:16,0:16:41.67:0,42,533	0/0:28,0:28:51.31:0,51,486	0/0:18,0:18:46.07:0,46,298	0/0:11,0:11:7.80:0,8,163	1/1:5,31:36:97.24:1151,97,0	0/0:19,0:19:56.20:0,56,366	0/0:24,0:24:66.93:0,67,375	0/0:22,0:22:55.58:0,56,391	0/0:29,0:29:43.21:0,43,429	0/0:29,0:29:81.68:0,82,549	0/0:17,0:17:50.13:0,50,321	0/0:22,0:22:34.48:0,34,340	0/0:20,0:20:57.19:0,57,821	0/0:16,0:16:44.45:0,44,298	0/0:20,0:20:14.50:0,15,299	1/1:3,18:21:54.17:652,54,0	1/1:3,23:26:68.24:784,68,0	1/1:1,13:14:39.12:458,39,0	0/0:25,0:25:45.77:0,46,420	0/0:22,0:22:62.31:0,62,428	0/0:24,0:24:70.95:0,71,461	0/0:28,0:28:58.01:0,58,488	0/0:25,0:25:64.44:0,64,387	1/1:1,28:29:85.14:997,85,0	1/1:0,24:24:72.22:852,72,0
chr10	96799160	.	T	TA	1091.67	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.872;DP=530;FS=5.052;HRun=9;HaplotypeScore=54.4899;InbreedingCoeff=0.9022;MQ=67.96;MQ0=0;MQRankSum=0.387;QD=20.99;ReadPosRankSum=1.332;VQSLOD=4.4204;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,35:37:84.23:929,84,0	0/0:8,0:8:20.97:0,21,177	0/0:11,0:11:19.61:0,20,166	0/0:13,0:11:17.92:0,18,147	0/0:10,0:10:26.98:0,27,234	0/0:20,0:20:53.96:0,54,464	0/0:19,0:19:41.94:0,42,355	0/0:29,0:29:59.93:0,60,512	0/0:17,0:17:47.97:0,48,412	0/0:21,0:21:56.97:0,57,493	0/0:27,0:27:80.96:0,81,697	0/0:10,0:10:23.99:0,24,208	0/0:17,0:17:47.99:0,48,417	0/0:19,0:19:44.95:0,45,384	0/0:14,0:14:32.99:0,33,286	1/1:1,14:15:4.11:273,4,0	0/0:27,0:27:77.94:0,78,667	0/0:25,0:25:62.89:0,63,540	0/0:18,1:19:17.80:0,18,384	0/0:22,0:22:56.97:0,57,495	0/0:10,0:10:20.99:0,21,182	0/0:17,0:17:41.95:0,42,357	0/0:19,0:20:53.01:0,53,446	0/0:20,0:20:37.19:0,37,449	0/0:21,0:21:56.93:0,57,484	0/0:24,0:23:62.95:0,63,540	0/0:24,0:23:68.97:0,69,594	0/0:14,0:14:41.99:0,42,365
chr10	96799353	.	CACAG	C	3743.23	PASS	AB=0.757;AC=40;AF=0.741;AN=54;BaseQRankSum=-2.349;DP=404;FS=12.768;HRun=0;HaplotypeScore=70.1038;InbreedingCoeff=0.2286;MQ=60.28;MQ0=13;MQRankSum=1.078;QD=12.73;ReadPosRankSum=2.349;VQSLOD=1.5661;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:31.70:32,0,338	1/1:1,0:1:1.82:5,2,0	0/0:33,0:8:14.03:0,14,102	0/0:57,0:13:2.87:0,3,44	1/1:1,2:9:2.28:59,2,0	1/1:13,0:13:35.88:337,36,0	1/1:1,15:17:14.98:234,15,0	0/1:23,0:22:99:198,0,152	0/1:1,11:13:6.08:143,0,6	1/1:3,1:4:11.97:130,12,0	0/1:0,9:9:0.14:0,0,0	1/1:9,1:11:27.02:343,27,0	1/1:10,6:16:40.56:459,41,0	1/1:0,12:12:12.03:238,12,0	1/1:0,12:12:6.02:97,6,0	0/0:8,0:8:11.96:0,12,129	1/1:1,11:12:5.98:119,6,0	0/1:4,0:11:24.33:24,0,57	1/1:8,3:11:26.93:329,27,0	1/1:0,4:5:6.02:97,6,0	1/1:1,18:19:12.04:238,12,0	1/1:5,0:5:6.01:76,6,0	0/1:0,11:11:0.11:0,0,0	./.	0/1:2,12:14:5.78:69,0,6	1/1:0,12:12:32.67:259,33,0	1/1:0,14:15:15.83:235,16,0	0/1:11,0:10:22.52:23,0,115
chr10	96799901	.	C	CACACACACAA	8638.84	PASS	AB=1.000;AC=44;AF=0.846;AN=52;BaseQRankSum=5.974;DP=531;FS=16.993;HRun=0;HaplotypeScore=170.6462;InbreedingCoeff=0.5630;MQ=67.28;MQ0=9;MQRankSum=-5.287;QD=20.82;ReadPosRankSum=-2.069;VQSLOD=2.9051;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:42:99:145,0,409	1/1:6,0:6:12.35:173,12,0	0/0:34,0:25:54.42:0,54,592	0/0:33,0:22:46.10:0,46,461	1/1:18,0:19:41.46:440,41,0	1/1:26,0:25:59.81:648,60,0	1/1:17,0:17:32.50:206,33,0	1/1:21,0:21:50.31:712,50,0	1/1:0,10:23:3.01:162,3,0	1/1:21,0:21:59.87:818,60,0	1/1:11,0:11:17.88:268,18,0	1/1:16,0:14:38.79:462,39,0	1/1:11,0:10:20.86:353,21,0	1/1:0,6:10:6.02:278,6,0	1/1:14,0:14:25.86:254,26,0	0/1:20,0:19:99:202,0,141	1/1:21,0:21:39.31:584,39,0	0/0:14,0:13:14.30:0,14,227	1/1:13,0:14:35.94:475,36,0	1/1:13,0:13:23.77:216,24,0	1/1:1,15:25:3:27,3,0	1/1:23,0:23:56.54:620,57,0	1/1:14,0:14:29.57:232,30,0	./.	./.	1/1:26,0:25:62.51:757,63,0	1/1:15,0:15:29.82:463,30,0	1/1:0,0:5:3.01:145,3,0
chr10	96801136	.	GA	G	10336.64	PASS	AB=0.840;AC=49;AF=0.875;AN=56;BaseQRankSum=-0.999;DP=610;FS=1.003;HRun=10;HaplotypeScore=69.3326;InbreedingCoeff=0.9073;MQ=78.51;MQ0=0;MQRankSum=-3.083;QD=19.14;ReadPosRankSum=4.134;VQSLOD=5.5915;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.16:0,81,870	1/1:1,13:14:29.95:260,30,0	0/0:25,1:26:24.46:0,24,422	0/0:14,0:13:23.60:0,24,217	1/1:4,21:25:56.08:463,56,0	1/1:4,21:25:56.99:495,57,0	1/1:2,17:19:27.13:347,27,0	1/1:4,25:29:71.89:613,72,0	1/1:1,16:17:41.99:365,42,0	1/1:3,14:17:38.96:334,39,0	1/1:4,18:22:47.98:417,48,0	1/1:2,18:21:47.02:396,47,0	1/1:5,18:23:47.97:417,48,0	1/1:2,10:12:26.98:234,27,0	1/1:0,30:30:83.98:729,84,0	0/1:17,4:21:0.97:1,0,447	1/1:3,28:31:77.97:677,78,0	1/1:3,12:15:30.32:262,30,0	1/1:4,16:20:47.97:417,48,0	1/1:3,22:25:56.92:488,57,0	1/1:2,32:34:80.97:703,81,0	1/1:6,16:22:44.97:390,45,0	1/1:5,15:20:15.37:358,15,0	1/1:3,26:29:71.97:625,72,0	1/1:3,18:21:47.98:417,48,0	1/1:3,13:16:38.96:332,39,0	1/1:4,17:21:41.98:365,42,0	1/1:2,9:11:26.99:234,27,0
chr10	96801236	.	GGTGT	G	558.95	PASS	AB=0.890;AC=8;AF=0.154;AN=52;BaseQRankSum=3.898;DP=578;FS=23.041;HRun=0;HaplotypeScore=91.3991;InbreedingCoeff=0.3369;MQ=71.47;MQ0=10;MQRankSum=-0.501;QD=4.58;ReadPosRankSum=0.596;VQSLOD=-0.0247;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,9:25:20.74:328,21,0	0/0:10,0:12:17.53:0,18,283	./.	./.	0/1:10,1:10:6.62:41,0,7	0/0:22,0:20:21.05:0,21,384	0/0:19,0:22:17.53:0,18,302	0/0:38,0:38:8.94:0,9,67	0/0:16,0:18:23.80:0,24,463	0/0:20,0:18:15.05:0,15,309	0/0:5,0:5:3.01:0,3,71	0/1:21,1:23:13.81:14,0,575	0/0:20,0:20:20.81:0,21,435	0/0:15,0:15:15.05:0,15,296	0/0:28,0:30:50.90:0,51,1039	1/1:16,4:21:17.99:233,18,0	0/0:22,0:22:21.50:0,21,391	0/0:16,0:16:9.03:0,9,146	0/0:12,0:12:6.02:0,6,115	0/0:7,0:7:9.03:0,9,184	0/0:37,0:39:26.83:0,27,501	0/0:11,0:11:9.03:0,9,184	0/0:3,0:4:11.78:0,12,202	0/0:38,0:38:68.94:0,69,1441	0/1:18,1:21:13.87:14,0,553	0/0:13,0:13:11.78:0,12,202	0/1:17,3:19:69.77:70,0,400	0/0:11,0:15:8.50:0,8,95
chr10	96801276	.	T	TGCGCGCGCGCGC	216.66	PASS	AB=0.632;AC=1;AF=0.018;AN=56;BaseQRankSum=2.951;DP=641;FS=3.380;HRun=0;HaplotypeScore=205.4458;InbreedingCoeff=0.0661;MQ=68.68;MQ0=19;MQRankSum=-1.894;QD=18.06;ReadPosRankSum=-2.274;VQSLOD=2.4853;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:81.60:0,82,2805	0/0:9,0:9:27.06:0,27,891	0/0:37,0:19:51.09:0,51,1570	0/0:50,0:29:81.25:0,81,2341	0/0:23,0:21:50.88:0,51,1870	0/0:23,0:22:48.13:0,48,1480	0/0:30,0:30:62.31:0,62,2059	0/0:16,0:16:22.13:0,22,1342	0/0:18,0:18:36.73:0,37,1424	0/0:25,0:25:64.17:0,64,2349	0/0:8,0:8:21.07:0,21,741	0/0:27,0:27:56.73:0,57,1909	0/0:12,0:12:24.81:0,25,1055	0/0:14,0:14:33.57:0,34,1033	0/0:34,0:34:92.98:0,93,3201	0/0:15,0:15:42.99:0,43,1163	0/0:23,0:23:42.31:0,42,1513	0/1:5,5:12:13.27:291,0,13	0/0:15,0:14:36:0,36,1008	0/0:13,0:13:27.08:0,27,944	0/0:45,0:44:99:0,103,3520	0/0:18,0:18:42.13:0,42,1408	0/0:10,0:9:26.98:0,27,820	0/0:38,0:38:96.33:0,96,3495	0/0:28,0:27:75.22:0,75,2362	0/0:20,0:18:29.68:0,30,1517	0/0:24,0:23:63.06:0,63,1956	0/0:16,0:15:33.11:0,33,1165
chr10	96802002	.	T	TAA	6561.81	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-3.476;DP=593;FS=3.253;HRun=14;HaplotypeScore=98.9059;InbreedingCoeff=0.9081;MQ=75.61;MQ0=1;MQRankSum=-1.650;QD=13.87;ReadPosRankSum=-2.528;VQSLOD=3.5974;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:56.27:0,56,505	1/1:1,8:11:27.91:324,28,0	0/0:20,0:19:14.53:0,15,117	0/0:17,0:15:5.30:0,5,55	1/1:8,14:23:42.82:357,43,0	1/1:2,11:19:25.76:261,26,0	1/1:4,12:19:17.33:157,17,0	1/1:11,15:30:62.97:655,63,0	1/1:3,13:17:24.69:286,25,0	1/1:8,3:22:32.82:219,33,0	1/1:4,4:11:11.97:121,12,0	1/1:2,15:20:32.45:375,32,0	1/1:3,6:12:11.39:104,11,0	1/1:3,7:17:13.77:134,14,0	1/1:8,11:22:20.05:186,20,0	0/0:22,0:24:32.59:0,33,269	1/1:5,26:37:52.55:556,53,0	0/0:3,0:23:52.08:0,52,222	1/1:7,11:22:46.66:441,47,0	1/1:11,13:27:46.16:467,46,0	1/1:8,7:15:6.02:79,6,0	1/1:4,8:15:14.93:146,15,0	1/1:8,7:19:24.10:225,24,0	1/1:7,18:26:27.26:322,27,0	1/1:5,12:21:28.81:305,29,0	1/1:14,12:30:43.96:384,44,0	1/1:8,13:21:23.25:248,23,0	1/1:5,7:16:12.01:210,12,0
chr10	96802572	.	AT	A	455.47	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.947;DP=644;FS=7.444;HRun=8;HaplotypeScore=62.8789;InbreedingCoeff=0.9902;MQ=71.24;MQ0=0;MQRankSum=-1.233;QD=20.70;ReadPosRankSum=1.265;VQSLOD=3.8279;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,1474	0/0:9,0:9:24.07:0,24,290	0/0:11,0:11:24.05:0,24,272	0/0:15,0:14:26.35:0,26,260	0/0:29,0:29:75.22:0,75,895	0/0:21,0:21:57.17:0,57,688	0/0:24,0:24:60.18:0,60,725	0/0:33,1:34:55.26:0,55,928	0/0:24,0:24:63.17:0,63,735	0/0:27,0:27:72.22:0,72,869	0/0:25,0:25:63.16:0,63,727	0/0:19,0:19:54.17:0,54,652	0/0:15,0:15:42.11:0,42,495	0/0:11,0:11:30.09:0,30,362	0/0:32,0:32:87.25:0,87,1038	0/0:27,0:27:72.22:0,72,868	0/0:40,0:40:99:0,108,1304	1/1:1,21:22:57.09:550,57,0	0/0:23,0:23:57.17:0,57,677	0/0:25,0:25:66.18:0,66,774	0/0:17,0:17:50.37:0,50,586	0/0:15,0:15:39.12:0,39,471	0/0:30,0:30:78.23:0,78,929	0/0:19,0:19:54.14:0,54,629	0/0:23,0:23:63.18:0,63,742	0/0:23,1:24:43.24:0,43,803	0/0:32,0:32:75.20:0,75,884	0/0:7,0:7:21.06:0,21,254
chr10	96803072	.	CCAAACAAA	C	222.30	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.220;DP=651;FS=0.000;HRun=0;HaplotypeScore=160.3185;InbreedingCoeff=0.9523;MQ=77.10;MQ0=0;MQRankSum=-3.384;QD=17.10;ReadPosRankSum=-0.440;VQSLOD=2.8703;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:66.22:0,66,2516	0/0:9,0:9:21.07:0,21,874	0/0:32,0:30:34.81:0,35,902	0/0:26,0:24:35.86:0,36,1065	0/0:30,0:30:63.11:0,63,2433	0/0:21,0:21:42.14:0,42,1659	0/0:28,0:28:72.25:0,72,2527	0/0:25,0:25:45.14:0,45,1556	0/0:24,0:24:66.23:0,66,2640	0/0:35,0:35:84.28:0,84,3260	0/0:22,0:22:51.15:0,51,1843	0/0:17,0:17:36.12:0,36,1507	0/0:22,0:22:57.17:0,57,2235	0/0:18,0:18:42.14:0,42,1747	0/0:29,0:29:63.22:0,63,2365	0/0:24,0:24:60.21:0,60,2479	0/0:41,0:41:99:0,105,4052	1/1:6,7:13:12.04:308,12,0	0/0:11,0:11:21.07:0,21,748	0/0:18,0:18:39.10:0,39,1301	0/0:19,0:19:45.10:0,45,1662	0/0:28,0:29:78.23:0,78,2808	0/0:19,0:19:48.15:0,48,1759	0/0:33,0:34:84.27:0,84,3200	0/0:20,0:20:51.18:0,51,1931	0/0:30,0:30:72.25:0,72,2688	0/0:18,0:18:51.16:0,51,1974	0/0:7,0:7:18.06:0,18,599
chr10	96803517	.	GCA	G	6168.73	PASS	AB=0.616;AC=43;AF=0.796;AN=54;BaseQRankSum=-3.143;DP=624;FS=1.578;HRun=0;HaplotypeScore=114.8946;InbreedingCoeff=0.6171;MQ=62.90;MQ0=8;MQRankSum=-0.289;QD=12.41;ReadPosRankSum=1.726;VQSLOD=4.5840;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:38:24:0,24,224	1/1:2,8:11:26.91:284,27,0	./.	0/0:25,0:10:4.26:0,4,41	1/1:15,16:31:16.88:364,17,0	1/1:7,12:20:23.90:251,24,0	1/1:10,8:20:32.49:310,32,0	1/1:24,0:33:12.88:59,13,0	1/1:12,6:18:14.87:149,15,0	1/1:14,8:24:29.66:253,30,0	1/1:6,6:12:18.01:189,18,0	0/1:9,11:21:13.35:254,0,13	1/1:6,11:18:23.71:250,24,0	1/1:8,8:17:20.81:199,21,0	1/1:12,16:32:47.47:461,47,0	0/0:8,0:27:34.81:0,35,314	1/1:13,18:31:48.13:540,48,0	0/0:15,0:18:14.77:0,15,104	1/1:8,7:15:15.04:169,15,0	1/1:11,9:20:23.96:240,24,0	1/1:11,13:25:29.75:298,30,0	0/1:10,14:26:7.07:296,0,7	1/1:11,8:20:20.89:214,21,0	1/1:4,15:20:41.85:453,42,0	0/1:6,12:18:12.87:285,0,13	1/1:18,10:28:21.53:237,22,0	1/1:15,12:29:32.76:332,33,0	1/1:2,0:5:14.35:79,14,0
chr10	96803738	.	CCAT	C	364.35	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.915;DP=729;FS=1.129;HRun=0;HaplotypeScore=96.0786;InbreedingCoeff=0.9941;MQ=64.53;MQ0=16;MQRankSum=-0.014;QD=20.24;ReadPosRankSum=1.413;VQSLOD=3.1031;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:46:99:0,135,2122	0/0:10,0:10:30.07:0,30,599	0/0:33,0:19:47.15:0,47,695	0/0:22,0:17:33.62:0,34,441	0/0:24,0:22:66.07:0,66,1135	0/0:14,0:14:42.11:0,42,855	0/0:25,0:25:72.16:0,72,1324	0/0:33,0:32:83.93:0,84,1154	0/0:26,0:26:78.14:0,78,1515	0/0:27,0:26:75.17:0,75,1196	0/0:14,0:14:39.04:0,39,599	0/0:21,0:21:60.08:0,60,946	0/0:23,0:23:69.13:0,69,1277	0/0:22,0:22:63.16:0,63,1249	0/0:31,0:31:87.22:0,87,1734	0/0:27,0:27:72.18:0,72,1433	0/0:36,0:36:99:0,105,1835	1/1:0,18:18:27.09:458,27,0	0/0:22,0:19:52.67:0,53,683	0/0:28,0:28:74.47:0,74,1066	0/0:58,0:53:99:0,126,2306	0/0:28,0:28:84.09:0,84,1429	0/0:19,0:18:54.11:0,54,996	0/0:33,0:33:84.49:0,84,1387	0/0:21,0:19:54.06:0,54,819	0/0:25,0:24:69.12:0,69,925	0/0:33,0:32:93.19:0,93,1797	0/0:7,0:7:20.99:0,21,341
chr10	96804822	.	T	TA	104.89	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.145;DP=612;FS=7.187;HRun=1;HaplotypeScore=58.5569;InbreedingCoeff=0.9653;MQ=67.36;MQ0=1;MQRankSum=-2.300;QD=8.74;ReadPosRankSum=-2.144;VQSLOD=0.0306;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:45.10:0,45,551	0/0:8,0:8:21.07:0,21,273	0/0:17,0:15:17.55:0,18,426	0/0:10,0:10:20.82:0,21,262	0/0:32,0:32:93.30:0,93,1195	0/0:22,0:22:57.19:0,57,740	0/0:15,0:15:45.14:0,45,578	0/0:35,0:35:99:0,105,1334	0/0:22,0:22:55.97:0,56,679	0/0:23,0:21:63.20:0,63,818	0/0:29,0:29:83.48:0,83,1053	0/0:27,0:27:63.19:0,63,804	0/0:23,0:23:66.20:0,66,836	0/0:16,0:16:39.13:0,39,505	0/0:26,0:26:66.21:0,66,855	0/0:21,0:21:54.18:0,54,701	0/0:25,0:25:69.20:0,69,877	1/1:1,7:10:14.67:193,15,0	0/0:23,0:23:60.19:0,60,777	0/0:32,0:32:93.30:0,93,1198	0/0:13,0:13:33.11:0,33,428	0/0:28,0:28:81.26:0,81,1044	0/0:27,0:27:75.23:0,75,955	0/0:19,0:19:51.17:0,51,662	0/0:26,0:26:69.22:0,69,890	0/0:18,0:18:54.18:0,54,700	0/0:25,0:25:69.22:0,69,885	0/0:19,0:19:51.16:0,51,655
chr10	96804903	.	A	AAATG	2715.75	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.590;DP=665;FS=11.915;HRun=0;HaplotypeScore=108.3653;InbreedingCoeff=0.9882;MQ=65.67;MQ0=0;MQRankSum=0.693;QD=42.43;ReadPosRankSum=0.905;VQSLOD=3.7777;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,28:40:75.26:1829,75,0	0/0:11,0:11:24.08:0,24,393	0/0:24,0:22:15.02:0,15,175	0/0:22,0:19:22.72:0,23,348	0/0:28,0:28:60.16:0,60,931	0/0:28,0:28:63.17:0,63,998	0/0:18,0:18:42.12:0,42,640	0/0:43,0:43:57.10:0,57,771	0/0:28,0:28:63.09:0,63,900	0/0:27,0:27:51.13:0,51,784	0/0:19,0:19:39.11:0,39,590	0/0:21,0:21:36.10:0,36,542	0/0:17,0:17:45.15:0,45,735	0/0:17,0:17:33.11:0,33,537	0/0:24,0:24:42.09:0,42,635	1/1:7,16:24:42.14:1008,42,0	0/0:28,0:28:60.19:0,60,937	0/0:3,0:35:84.10:0,84,783	0/0:23,0:22:42.09:0,42,614	0/0:18,0:18:39.11:0,39,593	0/0:18,0:18:39.12:0,39,614	0/0:21,0:21:36.11:0,36,565	0/0:21,0:21:36.10:0,36,542	0/0:33,0:33:63.18:0,63,982	0/0:15,0:14:27.09:0,27,421	0/0:20,0:20:36.11:0,36,566	0/0:27,0:28:63.17:0,63,980	0/0:13,0:13:33.03:0,33,439
chr10	96805292	.	TTGGG	T	790.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.210;DP=639;FS=1.961;HRun=0;HaplotypeScore=109.6829;InbreedingCoeff=0.9691;MQ=93.96;MQ0=0;MQRankSum=-7.193;QD=43.90;ReadPosRankSum=1.066;VQSLOD=4.3337;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,3168	0/0:9,0:9:27.09:0,27,768	0/0:26,0:26:69.71:0,70,1899	0/0:30,0:30:87.28:0,87,2240	0/0:26,0:26:78.27:0,78,2227	0/0:18,0:18:54.17:0,54,1494	0/0:23,0:23:66.23:0,66,1886	0/0:23,0:23:69.24:0,69,1987	0/0:18,0:18:54.19:0,54,1537	0/0:32,0:32:96.33:0,96,2751	0/0:19,0:19:57.20:0,57,1648	0/0:24,0:24:72.25:0,72,2087	0/0:19,0:19:57.20:0,57,1638	0/0:19,0:19:57.20:0,57,1562	0/0:19,0:19:57.17:0,57,1529	0/0:27,0:27:81.28:0,81,2347	0/0:30,0:30:90.31:0,90,2607	1/1:0,18:18:54.18:885,54,0	0/0:12,0:12:36.12:0,36,1044	0/0:19,0:19:57.20:0,57,1601	0/0:49,0:49:99:0,147,4115	0/0:26,0:26:78.27:0,78,2258	0/0:12,0:12:36.12:0,36,1041	0/0:36,0:35:99:0,108,3007	0/0:17,0:17:51.18:0,51,1464	0/0:23,0:23:69.24:0,69,1993	0/0:24,0:24:72.25:0,72,2085	0/0:4,0:4:12.04:0,12,346
chr10	96805297	.	AAAAGGGGT	A	1167.89	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.222;DP=645;FS=1.957;HRun=0;HaplotypeScore=164.0305;InbreedingCoeff=0.9663;MQ=92.62;MQ0=0;MQRankSum=-7.213;QD=64.88;ReadPosRankSum=1.253;VQSLOD=3.9229;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,4322	0/0:9,0:9:21.07:0,21,878	0/0:24,0:24:66.70:0,67,2764	0/0:30,0:30:87.27:0,87,3119	0/0:24,0:23:69.19:0,69,2709	0/0:17,0:17:48.12:0,48,1917	0/0:26,0:26:72.23:0,72,3080	0/0:26,0:26:78.26:0,78,3104	0/0:16,0:16:48.16:0,48,2132	0/0:33,0:33:99:0,99,4460	0/0:20,0:20:60.21:0,60,2583	0/0:24,0:24:72.25:0,72,3253	0/0:20,0:20:60.18:0,60,2422	0/0:16,0:16:48.15:0,48,2058	0/0:20,0:20:60.21:0,60,2653	0/0:29,0:29:87.30:0,87,3767	0/0:30,0:30:90.25:0,90,3704	1/1:0,18:18:54.10:1263,54,0	0/0:12,0:12:36.12:0,36,1376	0/0:21,0:21:63.21:0,63,2638	0/0:50,0:50:99:0,151,6645	0/0:29,0:29:87.28:0,87,3644	0/0:12,0:12:35.85:0,36,1278	0/0:35,0:34:99:0,105,4415	0/0:18,0:18:54.19:0,54,2372	0/0:22,0:22:66.19:0,66,2392	0/0:25,0:25:75.21:0,75,2899	0/0:4,0:4:12.04:0,12,531
chr10	96808157	.	T	TGCGC	7869.93	PASS	AB=0.738;AC=45;AF=0.804;AN=56;BaseQRankSum=-4.755;DP=590;FS=1.634;HRun=0;HaplotypeScore=105.6077;InbreedingCoeff=0.3624;MQ=61.60;MQ0=15;MQRankSum=1.016;QD=16.29;ReadPosRankSum=1.092;VQSLOD=4.6572;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:63.08:0,63,940	1/1:11,0:12:14.71:351,15,0	0/0:36,0:24:63.22:0,63,1163	0/0:42,0:20:40.85:0,41,778	1/1:2,13:18:7.28:285,7,0	1/1:2,15:22:12.04:251,12,0	0/1:5,18:25:22.49:229,0,22	1/1:20,0:18:42.05:489,42,0	1/1:3,21:28:24.08:613,24,0	1/1:3,0:22:48.77:684,49,0	1/1:0,9:11:5.98:123,6,0	1/1:4,15:22:5.93:241,6,0	1/1:3,13:18:12.51:210,13,0	1/1:1,17:21:6.02:157,6,0	1/1:1,11:15:3.22:43,3,0	0/1:21,1:22:66.75:67,0,712	0/1:7,10:18:20.17:357,0,20	0/1:11,0:9:2.05:2,0,10	1/1:6,9:18:38.10:612,38,0	1/1:2,10:14:3.01:82,3,0	1/1:25,0:25:25.56:393,26,0	0/1:3,11:15:4.92:76,0,5	1/1:1,16:18:16.59:490,17,0	1/1:7,21:35:20.17:617,20,0	1/1:3,14:19:5.75:127,6,0	1/1:1,18:20:51.08:823,51,0	1/1:8,9:24:10.85:439,11,0	1/1:0,0:6:6.02:108,6,0
chr10	96808860	.	T	TAAAAAA	9148.55	PASS	AB=0.952;AC=46;AF=0.821;AN=56;BaseQRankSum=10.547;DP=512;FS=19.881;HRun=0;HaplotypeScore=157.3339;InbreedingCoeff=0.4464;MQ=56.35;MQ0=4;MQRankSum=-3.572;QD=21.68;ReadPosRankSum=-8.033;VQSLOD=1.2604;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.28:0,93,2085	1/1:3,0:5:10.97:268,11,0	0/0:36,0:17:46.24:0,46,571	0/0:21,0:6:13.86:0,14,270	1/1:28,2:30:23.98:654,24,0	1/1:5,9:19:12.90:342,13,0	1/1:10,2:14:13.22:444,13,0	1/1:20,0:22:26.76:299,27,0	1/1:21,1:23:21.96:609,22,0	1/1:12,0:13:4.25:313,4,0	1/1:12,0:11:17.11:259,17,0	1/1:21,1:22:18.79:613,19,0	1/1:13,1:13:14.07:455,14,0	1/1:11,2:13:14.63:411,15,0	1/1:18,2:20:13.65:535,14,0	0/1:16,0:17:15.76:16,0,920	1/1:9,5:21:2.64:201,3,0	1/1:1,0:10:13.05:125,13,0	1/1:18,0:18:26.79:484,27,0	1/1:17,3:21:35.56:828,36,0	1/1:8,0:8:2.04:54,2,0	1/1:12,0:12:2.43:96,2,0	0/1:13,0:12:6.93:115,0,7	0/1:10,1:11:2.17:80,0,2	1/1:20,1:21:30.08:694,30,0	1/1:28,1:28:45.70:705,46,0	0/1:17,0:18:1.37:325,0,1	1/1:8,0:11:15.19:225,15,0
chr10	96810255	.	C	CA	4373.17	PASS	AB=0.680;AC=40;AF=0.714;AN=56;BaseQRankSum=-2.886;DP=732;FS=2.246;HRun=14;HaplotypeScore=112.3147;InbreedingCoeff=0.0504;MQ=65.76;MQ0=9;MQRankSum=-0.961;QD=6.97;ReadPosRankSum=0.097;VQSLOD=3.9221;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:42:73.95:0,74,432	1/1:3,7:10:1.70:132,2,0	0/0:37,0:13:18.47:0,18,99	0/1:41,0:14:21.98:22,0,28	1/1:10,14:25:13.16:304,13,0	1/1:6,6:14:20.68:160,21,0	0/1:17,25:41:11.88:272,0,12	1/1:15,1:21:27.08:141,27,0	0/1:6,4:9:9.92:44,0,10	0/1:20,7:28:11.35:141,0,11	1/1:5,13:18:16.48:244,16,0	1/1:5,14:20:14.15:152,14,0	1/1:8,12:19:4.74:165,5,0	1/1:13,1:15:5.03:46,5,0	0/1:9,20:30:3.79:146,0,4	0/0:19,0:20:1.80:0,2,117	1/1:28,8:36:10.26:387,10,0	1/1:8,0:28:26.26:140,26,0	1/1:18,15:33:19.62:279,20,0	1/1:10,12:22:4.65:151,5,0	0/1:5,19:24:11.53:157,0,12	1/1:8,15:25:13.67:213,14,0	1/1:5,17:23:4.91:183,5,0	0/1:8,27:37:15.08:237,0,15	0/1:17,19:37:2.16:306,0,2	0/1:15,12:27:30.79:132,0,31	1/1:4,14:17:20.99:185,21,0	0/1:9,0:15:6.36:34,0,6
chr10	96810702	.	GAAA	G	9412.04	PASS	AB=0.643;AC=47;AF=0.839;AN=56;BaseQRankSum=4.466;DP=611;FS=1.192;HRun=15;HaplotypeScore=125.1565;InbreedingCoeff=0.8719;MQ=57.24;MQ0=13;MQRankSum=-0.644;QD=21.25;ReadPosRankSum=6.102;VQSLOD=3.5708;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:36:41.49:0,41,631	1/1:3,4:8:11.65:134,12,0	0/0:52,0:21:31.99:0,32,318	0/0:57,0:16:12.49:0,12,74	1/1:4,28:35:74.71:820,75,0	1/1:2,22:25:57.05:638,57,0	1/1:4,11:15:29.78:336,30,0	1/1:9,8:17:29.25:311,29,0	1/1:1,10:12:29.97:331,30,0	1/1:5,19:25:53.09:577,53,0	1/1:7,14:22:35.30:431,35,0	1/1:3,6:9:17.67:201,18,0	1/1:4,13:17:26.82:300,27,0	1/1:5,7:14:20.43:235,20,0	1/1:5,10:16:26.51:302,27,0	0/0:10,0:18:35.90:0,36,321	1/1:5,17:23:44.62:488,45,0	1/1:1,16:17:38.97:437,39,0	0/1:8,9:17:5.76:252,0,6	1/1:9,18:27:59.74:636,60,0	1/1:1,9:10:21.06:235,21,0	1/1:5,14:19:35.63:403,36,0	1/1:3,13:16:32.16:368,32,0	1/1:1,14:15:39.11:435,39,0	1/1:6,13:22:35.37:403,35,0	1/1:5,15:24:50.07:536,50,0	1/1:10,14:24:29.15:313,29,0	1/1:0,7:10:27.04:290,27,0
chr10	96812462	.	CACAT	C	1681.77	PASS	AB=0.937;AC=13;AF=0.232;AN=56;BaseQRankSum=10.457;DP=861;FS=4.218;HRun=0;HaplotypeScore=138.2146;InbreedingCoeff=0.6089;MQ=58.46;MQ0=8;MQRankSum=-4.123;QD=7.44;ReadPosRankSum=-2.638;VQSLOD=2.4545;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:36:5.95:56,6,0	0/0:14,0:14:27.09:0,27,628	0/0:44,0:23:3.01:0,3,71	0/0:37,0:16:6.02:0,6,142	0/0:37,0:37:60.17:0,60,1298	0/0:29,2:31:13.06:0,13,1281	0/0:28,0:28:34.67:0,35,767	1/1:30,12:42:36.06:454,36,0	0/0:32,0:32:78.24:0,78,1788	0/0:46,1:48:5.96:0,6,1533	0/0:34,1:35:13.05:0,13,1218	0/0:13,0:13:27.09:0,27,635	0/0:27,0:27:51.18:0,51,1191	0/0:22,0:22:45.14:0,45,1010	0/0:41,0:41:13.05:0,13,1252	1/1:9,0:19:21.02:195,21,0	0/0:24,0:24:54.15:0,54,1278	1/1:15,13:28:27.09:424,27,0	0/1:11,1:12:32.10:32,0,270	0/0:37,0:37:87.28:0,87,1993	0/0:39,0:39:54.17:0,54,1205	0/0:36,1:38:16.07:0,16,1309	0/1:36,2:39:28.07:28,0,1287	0/1:22,1:23:8.07:8,0,764	0/0:33,0:33:72.23:0,72,1609	0/0:28,0:28:13.06:0,13,1287	0/0:27,0:27:63.22:0,63,1463	1/1:6,20:26:42.14:660,42,0
chr10	96814009	.	CTTGT	C	2550.51	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.134;DP=615;FS=1.160;HRun=0;HaplotypeScore=98.1682;InbreedingCoeff=0.9976;MQ=79.27;MQ0=0;MQRankSum=-2.198;QD=41.14;ReadPosRankSum=4.301;VQSLOD=4.1357;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:44:99:1800,99,0	0/0:9,0:9:21.07:0,21,532	0/0:21,0:21:48.16:0,48,1168	0/0:15,0:15:38.90:0,39,809	0/0:30,0:30:84.29:0,84,2189	0/0:21,0:21:60.21:0,60,1570	0/0:25,0:25:72.23:0,72,1820	0/0:31,0:31:93.31:0,93,2310	0/0:23,0:23:69.24:0,69,1760	0/0:19,0:19:51.17:0,51,1270	0/0:19,0:19:54.19:0,54,1369	0/0:20,0:20:60.21:0,60,1570	0/0:22,0:22:57.20:0,57,1477	0/0:18,0:18:54.18:0,54,1327	0/0:14,0:14:42.14:0,42,1100	1/1:1,17:18:48.16:873,48,0	0/0:22,0:22:63.22:0,63,1613	0/0:15,0:15:45.15:0,45,1136	0/0:33,0:32:84.29:0,84,2130	0/0:26,0:26:72.25:0,72,1828	0/0:23,0:23:63.22:0,63,1646	0/0:17,0:17:45.15:0,45,1155	0/0:19,0:19:48.16:0,48,1237	0/0:18,0:18:48.16:0,48,1257	0/0:16,0:16:36.12:0,36,942	0/0:28,0:28:78.21:0,78,1891	0/0:38,0:38:99:0,99,2391	0/0:11,0:11:33.11:0,33,852
chr10	96814189	.	T	TA	1145.68	PASS	AB=0.585;AC=3;AF=0.054;AN=56;BaseQRankSum=-6.736;DP=631;FS=0.000;HRun=9;HaplotypeScore=180.1195;InbreedingCoeff=0.5248;MQ=65.60;MQ0=1;MQRankSum=-0.562;QD=17.63;ReadPosRankSum=1.318;VQSLOD=1.9078;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,35:41:83.99:895,84,0	0/0:7,0:7:20.99:0,21,181	0/0:32,0:16:14.52:0,15,146	0/0:22,0:16:7.38:0,7,99	0/0:28,0:28:59.45:0,59,514	0/0:14,0:14:35.96:0,36,304	0/0:23,0:22:17.07:0,17,147	0/0:28,0:28:51.57:0,52,515	0/0:24,0:25:56.16:0,56,470	0/0:28,0:28:59.36:0,59,489	0/0:21,0:21:47.88:0,48,398	0/0:17,0:17:41.50:0,41,343	0/0:23,0:23:29.51:0,30,230	0/0:17,0:17:41.88:0,42,336	0/0:19,1:21:0.19:0,0,269	0/1:7,17:24:8.46:356,0,8	0/0:24,0:24:47.88:0,48,396	0/0:20,0:20:10.95:0,11,234	0/0:25,0:25:54.11:0,54,460	0/0:29,0:29:59.56:0,60,471	0/0:9,0:9:17.96:0,18,150	0/0:21,0:21:49.94:0,50,417	0/0:14,0:15:14.03:0,14,167	0/0:21,0:21:22.22:0,22,263	0/0:22,0:22:38.96:0,39,331	0/0:29,0:29:68.89:0,69,618	0/0:39,0:39:80.33:0,80,659	0/0:6,0:6:11.99:0,12,104
chr10	96814199	.	C	CAAAA	11143.09	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=8.266;DP=639;FS=4.574;HRun=9;HaplotypeScore=178.0245;InbreedingCoeff=0.2057;MQ=69.16;MQ0=1;MQRankSum=-5.777;QD=20.26;ReadPosRankSum=3.951;VQSLOD=1.2388;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:90.19:0,90,1060	1/1:7,0:7:13.28:144,13,0	0/0:50,0:28:2.21:0,2,340	0/1:35,0:25:8.32:8,0,117	1/1:27,0:27:14.27:582,14,0	1/1:13,0:13:30.09:384,30,0	1/1:18,0:17:5.04:288,5,0	0/1:29,0:29:40.81:563,0,41	1/1:26,0:26:54.17:704,54,0	1/1:24,0:24:19.60:656,20,0	0/1:18,0:19:2.98:428,0,3	1/1:22,0:22:25.19:515,25,0	1/1:21,0:22:6.17:323,6,0	1/1:16,0:16:33.11:438,33,0	1/1:22,0:22:42.05:514,42,0	0/1:22,0:22:24.74:25,0,471	1/1:22,0:22:41.49:509,41,0	1/1:16,4:21:31:435,31,0	0/1:25,0:25:67.78:373,0,68	1/1:26,0:26:51.05:639,51,0	1/1:12,0:12:21.06:251,21,0	1/1:21,0:21:57.18:728,57,0	1/1:15,0:15:27.09:356,27,0	1/1:19,0:19:17.83:365,18,0	1/1:18,0:18:36.11:446,36,0	0/1:25,0:25:18.35:504,0,18	1/1:40,0:40:67.06:857,67,0	1/1:4,0:4:9.03:109,9,0
chr10	96814209	.	C	CAAAAA	32429.95	PASS	AB=0.952;AC=50;AF=0.893;AN=56;BaseQRankSum=-10.946;DP=665;FS=2.058;HRun=9;HaplotypeScore=117.9203;InbreedingCoeff=0.6999;MQ=69.40;MQ0=1;MQRankSum=-5.651;QD=56.01;ReadPosRankSum=3.462;VQSLOD=3.8875;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,99,1952	1/1:0,6:8:17.96:429,18,0	0/0:48,0:28:47.63:0,48,820	0/1:33,0:24:1.61:2,0,315	1/1:1,30:33:83.98:2022,84,0	1/1:0,10:11:30.10:993,30,0	1/1:0,15:17:24.08:764,24,0	1/1:3,30:34:74.69:2322,75,0	1/1:0,24:29:54.19:1764,54,0	1/1:0,25:25:69.71:2048,70,0	1/1:2,16:21:53.88:1289,54,0	1/1:0,21:25:42.14:1380,42,0	1/1:1,20:26:27.09:882,27,0	1/1:0,19:21:33.11:1078,33,0	1/1:0,19:24:41.78:1364,42,0	0/1:17,2:19:99:148,0,930	1/1:1,19:22:41.97:1304,42,0	1/1:15,5:20:52.10:873,52,0	1/1:1,23:24:61.98:1848,62,0	1/1:1,24:25:54.18:1634,54,0	1/1:1,14:15:21.07:697,21,0	1/1:0,21:22:60.12:1889,60,0	1/1:0,16:16:26.75:890,27,0	1/1:2,13:19:33.11:1055,33,0	1/1:1,17:18:36.12:1193,36,0	1/1:0,23:27:78.21:2073,78,0	1/1:1,36:37:68.79:2194,69,0	1/1:2,4:7:9.03:299,9,0
chr10	96814613	.	TGGG	T	2717.85	PASS	AB=0.938;AC=36;AF=0.643;AN=56;BaseQRankSum=-4.360;DP=335;FS=20.464;HRun=12;HaplotypeScore=68.3176;InbreedingCoeff=0.2356;MQ=77.92;MQ0=2;MQRankSum=-1.207;QD=9.96;ReadPosRankSum=1.688;VQSLOD=-0.4136;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:29:55.74:706,56,0	0/0:3,0:3:5.74:0,6,30	0/0:13,0:10:4.90:0,5,54	0/0:13,0:12:3.28:0,3,108	0/1:6,0:6:9.13:18,0,9	1/1:9,0:9:5.44:129,5,0	1/1:18,0:18:24.03:172,24,0	0/1:14,0:14:33.20:33,0,83	1/1:10,0:10:17.79:151,18,0	1/1:8,0:8:8.58:57,9,0	1/1:14,0:14:0.69:88,1,0	1/1:13,0:13:17.58:146,18,0	1/1:11,1:12:17.99:166,18,0	1/1:11,0:11:26.11:180,26,0	0/1:13,0:13:7.43:45,0,7	1/1:1,12:13:27.07:341,27,0	0/0:15,0:15:17.53:0,18,163	0/1:0,2:11:4.06:60,0,4	0/1:8,0:8:6.90:7,0,85	0/1:9,0:9:14.75:15,0,39	0/1:22,0:22:8.41:8,0,64	1/1:8,0:8:11.80:83,12,0	1/1:16,0:16:8.90:194,9,0	1/1:14,0:14:23.55:173,24,0	1/1:5,0:5:9.12:95,9,0	0/0:10,0:10:3.01:0,3,49	0/1:10,0:10:19.86:20,0,21	0/0:8,0:7:2.90:0,3,16
chr10	96814622	.	GGGGA	G	1845.58	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=-2.662;DP=320;FS=1.717;HRun=0;HaplotypeScore=76.8485;InbreedingCoeff=0.2459;MQ=73.40;MQ0=2;MQRankSum=0.048;QD=7.72;ReadPosRankSum=-0.843;VQSLOD=2.3169;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:38.27:0,38,166	0/1:4,0:4:4.67:17,0,5	0/0:9,0:6:3.99:0,4,63	0/0:12,0:11:17.01:0,17,237	0/1:6,0:6:1.98:21,0,2	1/1:8,0:8:13.01:73,13,0	1/1:15,1:16:22.64:157,23,0	0/1:19,0:19:20.33:163,0,20	1/1:9,0:9:15.33:98,15,0	1/1:3,4:7:14.78:131,15,0	1/1:11,1:12:18.75:154,19,0	1/1:11,0:11:15.72:73,16,0	1/1:9,0:9:16.87:88,17,0	1/1:12,1:13:23.32:147,23,0	0/1:12,0:12:17.86:18,0,19	0/0:12,0:12:15.83:0,16,43	0/1:18,0:18:12.15:12,0,127	0/0:11,0:11:24.02:0,24,179	0/1:10,0:10:25.58:101,0,26	0/1:7,0:7:6.06:59,0,6	0/1:18,0:18:9.50:164,0,9	1/1:8,1:9:11.32:93,11,0	1/1:14,0:14:16.03:135,16,0	1/1:9,2:11:22.93:192,23,0	1/1:8,0:8:4.43:70,4,0	0/1:8,0:8:16.32:52,0,16	0/1:10,0:10:5.87:7,0,6	0/0:8,0:7:1.82:0,2,5
chr10	96814623	.	GGGA	G	5337.46	PASS	AB=0.981;AC=48;AF=0.857;AN=56;BaseQRankSum=-3.069;DP=327;FS=14.947;HRun=0;HaplotypeScore=62.6121;InbreedingCoeff=0.2125;MQ=73.60;MQ0=2;MQRankSum=-2.259;QD=17.00;ReadPosRankSum=3.775;VQSLOD=3.2252;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,1:31:46.08:268,0,46	1/1:5,0:5:8.75:43,9,0	0/1:10,0:7:4.33:4,0,90	0/0:13,0:12:18.26:0,18,189	1/1:5,1:6:14.14:114,14,0	1/1:6,3:9:20.56:286,21,0	1/1:5,11:16:24.06:346,24,0	1/1:18,2:20:29.45:335,29,0	1/1:2,7:9:21.05:299,21,0	1/1:6,1:7:14.98:169,15,0	1/1:3,9:12:26.28:274,26,0	1/1:2,9:11:18.06:272,18,0	1/1:2,7:9:18.06:283,18,0	1/1:5,8:13:27.08:385,27,0	1/1:4,8:12:4.50:97,4,0	1/1:12,0:12:25.83:143,26,0	0/1:18,0:18:4.89:112,0,5	0/1:11,0:11:4.79:5,0,46	0/1:10,1:11:14.98:147,0,15	1/1:6,1:7:12.89:115,13,0	1/1:17,1:18:35.06:282,35,0	1/1:2,7:9:12.03:167,12,0	1/1:6,8:14:35.35:430,35,0	1/1:4,7:11:24.07:338,24,0	1/1:4,4:8:21.01:263,21,0	0/1:7,0:7:5.03:90,0,5	1/1:9,1:10:8.07:63,8,0	1/1:8,0:7:2.49:9,2,0
chr10	96814624	.	GGA	G	4070.67	PASS	AB=0.731;AC=47;AF=0.839;AN=56;BaseQRankSum=-4.178;DP=325;FS=2.845;HRun=0;HaplotypeScore=62.0447;InbreedingCoeff=0.5544;MQ=73.07;MQ0=2;MQRankSum=-1.160;QD=15.02;ReadPosRankSum=0.756;VQSLOD=2.8290;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:33.51:0,34,253	1/1:5,1:6:13.25:131,13,0	0/0:8,0:7:10.80:0,11,102	0/1:13,0:12:4.48:4,0,196	1/1:1,5:6:14.86:139,15,0	1/1:5,1:9:20.87:170,21,0	1/1:12,0:15:23.51:173,24,0	1/1:18,1:19:27.27:421,27,0	1/1:7,1:9:20.89:157,21,0	1/1:6,0:7:14.92:114,15,0	1/1:11,0:12:26.81:217,27,0	1/1:9,0:11:17.71:125,18,0	1/1:8,0:9:17.91:137,18,0	1/1:10,0:13:26.54:184,27,0	1/1:11,1:12:11.94:105,12,0	0/0:13,0:13:24.35:0,24,104	1/1:15,3:18:24.45:361,24,0	1/1:11,0:11:3.10:63,3,0	0/1:4,7:11:15.83:148,0,16	1/1:7,0:7:20.85:177,21,0	1/1:12,4:16:38.69:355,39,0	1/1:8,0:9:11.92:87,12,0	1/1:10,1:14:34.53:243,35,0	1/1:9,0:11:23.88:179,24,0	1/1:7,0:8:19.24:147,19,0	0/1:2,5:7:5.97:90,0,6	1/1:4,6:10:9.48:102,9,0	1/1:1,7:7:3.01:41,3,0
chr10	96814625	.	GAT	G	1483.44	PASS	AB=0.884;AC=41;AF=0.732;AN=56;BaseQRankSum=1.584;DP=323;FS=14.678;HRun=0;HaplotypeScore=70.4922;InbreedingCoeff=0.3956;MQ=74.88;MQ0=2;MQRankSum=-2.958;QD=5.93;ReadPosRankSum=4.264;VQSLOD=1.5673;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:71.97:0,72,723	1/1:5,1:6:7.99:78,8,0	0/0:10,0:9:10.96:0,11,231	0/1:10,1:10:20.34:20,0,242	1/1:6,0:6:5.69:33,6,0	1/1:9,1:10:15.44:93,15,0	1/1:15,0:15:15.51:83,16,0	0/1:16,2:20:20.82:86,0,21	1/1:9,0:9:11.21:46,11,0	0/1:6,0:6:0.17:3,0,0	1/1:11,1:12:17.21:107,17,0	1/1:11,0:11:14.24:77,14,0	1/1:9,0:9:13.11:53,13,0	1/1:12,1:13:23.85:142,24,0	1/1:10,2:12:3.28:23,3,0	0/0:14,0:14:32.67:0,33,330	1/1:13,5:18:7.21:158,7,0	0/0:11,0:11:2.66:0,3,86	0/1:8,1:9:8.71:9,0,20	1/1:6,2:8:4.20:101,4,0	1/1:15,1:16:11.24:69,11,0	1/1:9,0:9:8.96:44,9,0	1/1:12,2:14:26.29:185,26,0	1/1:11,0:11:18.51:94,19,0	1/1:8,0:8:12.93:66,13,0	0/0:5,1:6:1.71:0,2,4	0/1:7,3:10:9.62:62,0,10	1/1:7,0:6:2.90:16,3,0
chr10	96814867	.	G	GAA	4728.28	PASS	AB=0.884;AC=33;AF=0.589;AN=56;BaseQRankSum=-4.757;DP=634;FS=12.758;HRun=1;HaplotypeScore=189.4615;InbreedingCoeff=-0.2264;MQ=51.37;MQ0=15;MQRankSum=1.454;QD=9.20;ReadPosRankSum=3.599;VQSLOD=0.2556;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:29:63.07:63,0,155	0/1:10,2:12:31.42:57,0,31	0/0:44,0:17:16.73:0,17,250	0/0:46,0:13:17:0,17,106	0/1:18,3:21:0.38:97,0,0	0/1:19,1:20:53.85:174,0,54	1/1:25,0:25:7.39:210,7,0	0/1:43,0:41:99:316,0,293	0/1:15,2:17:60.15:132,0,60	0/1:21,1:22:85.52:228,0,86	0/1:13,3:16:44.47:90,0,44	0/1:17,10:27:99:154,0,103	0/1:22,1:23:15.85:323,0,16	0/1:8,2:9:2.25:59,0,2	0/1:21,3:24:25.20:249,0,25	0/0:28,0:28:12.22:0,12,295	1/1:21,2:22:35.93:209,36,0	1/1:7,23:32:32.54:686,33,0	0/1:18,3:21:18.96:363,0,19	0/1:20,2:22:44.59:88,0,45	1/1:18,0:18:14.74:91,15,0	1/1:11,3:14:13.63:102,14,0	1/1:22,0:22:6.42:173,6,0	0/1:13,3:16:9.40:32,0,9	1/1:9,2:11:1.48:65,1,0	1/1:19,5:24:18.22:415,18,0	0/1:10,5:15:3.06:245,0,3	0/1:5,1:6:6.96:106,0,7
chr10	96814875	.	AAG	A	437.10	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-3.488;DP=627;FS=0.544;HRun=0;HaplotypeScore=209.1082;InbreedingCoeff=0.4609;MQ=48.29;MQ0=12;MQRankSum=3.205;QD=3.41;ReadPosRankSum=-0.707;VQSLOD=2.0679;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,5:31:19.12:175,19,0	0/0:11,0:11:23.55:0,24,225	0/1:23,0:10:8.17:8,0,186	0/0:44,0:19:20.67:0,21,237	0/0:20,0:20:28.04:0,28,296	0/1:19,0:19:5.14:5,0,204	0/0:25,0:25:10.21:0,10,394	0/0:46,0:44:29.43:0,29,216	0/0:18,0:18:14.55:0,15,205	0/0:22,0:22:19.46:0,19,380	0/0:18,0:18:18.96:0,19,180	0/0:29,0:29:36.24:0,36,562	0/0:22,0:22:27.04:0,27,285	0/0:11,0:10:10.83:0,11,125	0/0:27,0:27:39.67:0,40,389	1/1:24,4:28:46.22:362,46,0	0/0:27,0:26:24.42:0,24,313	0/1:26,0:26:21.40:21,0,183	0/0:20,0:20:20.96:0,21,230	0/0:21,0:21:22.21:0,22,335	0/0:24,0:24:7.02:0,7,86	0/0:16,0:16:15:0,15,144	0/0:21,0:21:12.73:0,13,205	0/0:17,0:17:7.57:0,8,93	0/0:14,0:14:27.04:0,27,273	0/0:23,0:23:32.41:0,32,421	0/0:16,0:16:20.96:0,21,182	0/0:7,0:7:6.43:0,6,75
chr10	96814883	.	G	GAGAGAC	3651.05	PASS	AB=0.981;AC=22;AF=0.393;AN=56;BaseQRankSum=-0.517;DP=614;FS=25.992;HRun=0;HaplotypeScore=234.3129;InbreedingCoeff=-0.6283;MQ=54.98;MQ0=4;MQRankSum=-4.930;QD=7.85;ReadPosRankSum=1.700;VQSLOD=0.7190;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:54.74:0,55,736	0/1:10,0:10:40.73:41,0,99	0/0:19,0:12:19.18:0,19,277	0/0:33,0:22:29.31:0,29,409	0/0:19,0:19:8.29:0,8,284	0/1:22,0:22:99:205,0,152	0/1:26,0:26:5.66:6,0,239	0/1:43,0:41:38.96:411,0,39	0/1:14,0:14:99:182,0,123	0/1:23,0:23:99:271,0,318	0/1:18,0:18:99:115,0,112	0/1:29,0:29:99:307,0,339	0/1:21,0:21:99:138,0,199	0/1:10,0:9:98.33:98,0,102	0/1:26,0:26:99:244,0,241	0/0:29,0:29:76.11:0,76,1072	0/1:28,0:28:24.46:24,0,218	0/1:25,0:25:14.33:14,0,47	0/1:19,0:19:60.87:312,0,61	0/1:21,0:21:99:175,0,294	0/1:8,12:27:5.72:6,0,92	0/1:15,0:15:57.69:58,0,81	0/1:22,0:22:75.91:76,0,160	0/1:19,0:19:17.55:18,0,86	0/0:14,0:14:12.84:0,13,229	0/1:23,0:23:99:506,0,112	0/1:17,0:17:24.67:432,0,25	0/1:7,0:7:11.49:11,0,18
chr10	96814887	.	G	GACAAAC	12714.95	PASS	AB=0.846;AC=29;AF=0.518;AN=56;BaseQRankSum=-8.548;DP=618;FS=1.974;HRun=0;HaplotypeScore=202.7380;InbreedingCoeff=-0.3744;MQ=55.50;MQ0=3;MQRankSum=-3.693;QD=25.23;ReadPosRankSum=2.938;VQSLOD=4.8086;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:53.89:0,54,665	0/1:8,2:10:27.84:226,0,28	0/0:22,0:16:38.42:0,38,646	0/0:30,0:21:20.28:0,20,655	0/1:14,3:17:99:112,0,100	1/1:21,2:23:30.98:850,31,0	0/1:13,14:30:72.91:221,0,73	0/1:43,0:42:18.62:1718,0,19	0/1:12,2:14:10.86:598,0,11	0/1:23,1:24:99:792,0,208	0/1:15,3:18:90.45:514,0,90	0/1:19,9:29:99:997,0,129	0/1:18,1:19:26.07:576,0,26	0/1:8,2:9:57.37:306,0,57	0/1:24,3:27:38.46:931,0,38	0/0:29,0:29:76.57:0,77,938	0/1:12,17:30:81:168,0,81	0/1:23,0:23:13.61:14,0,48	1/1:4,13:19:20.56:944,21,0	0/1:20,2:22:99:533,0,195	0/1:26,1:27:33.74:108,0,34	0/1:7,10:18:53.91:161,0,54	0/1:8,12:20:35.93:191,0,36	1/1:17,3:20:5.98:283,6,0	0/1:12,2:14:99:152,0,125	1/1:11,12:24:7.71:1166,8,0	1/1:11,5:16:39.78:1086,40,0	0/1:7,0:7:61.37:70,0,61
chr10	96815791	.	TA	T	7313.32	PASS	AB=0.625;AC=51;AF=0.911;AN=56;BaseQRankSum=-1.583;DP=437;FS=3.092;HRun=11;HaplotypeScore=61.7107;InbreedingCoeff=0.6250;MQ=68.69;MQ0=0;MQRankSum=-3.115;QD=17.62;ReadPosRankSum=1.867;VQSLOD=6.0784;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,46:49:83.91:885,84,0	1/1:0,6:6:17.98:148,18,0	0/0:15,0:13:18.04:0,18,188	0/0:7,0:5:3:0,3,27	0/1:4,6:10:11.02:127,0,11	1/1:1,12:13:17.97:148,18,0	1/1:3,19:22:55.93:443,56,0	1/1:2,21:23:56.89:462,57,0	1/1:1,13:14:32.96:271,33,0	1/1:1,5:6:14.98:123,15,0	1/1:0,6:6:14.98:123,15,0	1/1:2,12:14:23.88:197,24,0	1/1:3,8:11:17.98:148,18,0	1/1:3,15:18:38.95:320,39,0	1/1:3,10:13:23.97:197,24,0	1/1:2,7:9:11.98:99,12,0	1/1:5,27:32:62.91:517,63,0	1/1:1,20:22:55.97:449,56,0	1/1:3,14:17:41.92:341,42,0	1/1:0,6:6:17.98:148,18,0	1/1:1,40:41:92.89:763,93,0	1/1:1,7:8:20.96:172,21,0	1/1:1,5:7:17.02:129,17,0	1/1:1,23:23:53.90:443,54,0	1/1:3,7:10:20.97:172,21,0	1/1:3,12:15:32.89:263,33,0	1/1:0,11:12:22.99:178,23,0	1/1:3,3:6:5.96:49,6,0
chr10	96815962	.	TAATA	T	584.73	PASS	AC=24;AF=0.857;AN=28;BaseQRankSum=0.572;DP=224;FS=7.196;HRun=0;HaplotypeScore=36.5412;InbreedingCoeff=0.3371;MQ=53.08;MQ0=7;MQRankSum=0.889;QD=5.91;ReadPosRankSum=1.461;VQSLOD=0.3035;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	1/1:4,3:7:3.01:40,3,0	./.	0/0:36,0:32:12.04:0,12,185	./.	1/1:4,0:4:3:27,3,0	./.	1/1:7,1:8:3.01:46,3,0	1/1:4,3:7:3.01:46,3,0	1/1:5,4:9:9.02:113,9,0	./.	./.	1/1:16,1:17:6.01:71,6,0	1/1:11,2:13:6.02:92,6,0	1/1:9,0:9:3.01:46,3,0	./.	./.	./.	./.	1/1:4,1:5:5.98:66,6,0	1/1:5,5:10:3.01:46,3,0	1/1:4,1:5:3.01:46,3,0	1/1:4,1:5:3.01:46,3,0	0/0:3,0:4:9.03:0,9,165
chr10	96816015	.	CT	C	3861.20	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=-4.982;DP=249;FS=11.824;HRun=4;HaplotypeScore=59.7973;InbreedingCoeff=0.7536;MQ=64.73;MQ0=5;MQRankSum=-2.955;QD=18.84;ReadPosRankSum=0.309;VQSLOD=2.0948;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:21:57.09:635,57,0	1/1:5,0:5:11.90:86,12,0	0/0:17,0:8:23.15:0,23,213	0/0:11,0:6:14.43:0,14,123	1/1:14,0:14:29.75:212,30,0	1/1:8,0:8:17.88:132,18,0	1/1:3,0:3:8.93:64,9,0	1/1:26,0:23:59.53:436,60,0	1/1:1,0:1:2.98:21,3,0	1/1:6,0:6:14.93:114,15,0	1/1:3,0:3:5.96:45,6,0	1/1:8,0:8:20.89:158,21,0	1/1:8,0:8:17.77:132,18,0	1/1:12,0:12:32.82:246,33,0	1/1:5,0:5:11.94:90,12,0	1/1:2,0:2:5.94:42,6,0	1/1:23,0:23:50.74:383,51,0	0/0:15,0:16:43.45:0,43,253	1/1:10,0:10:26.86:203,27,0	1/1:6,0:6:17.88:132,18,0	1/1:3,0:3:8.95:67,9,0	./.	1/1:5,0:4:5.95:43,6,0	1/1:3,0:3:8.95:66,9,0	1/1:10,0:10:17.89:133,18,0	1/1:9,0:9:20.84:153,21,0	1/1:8,0:8:20.89:157,21,0	1/1:6,0:6:14.90:109,15,0
chr10	96816018	.	TTAA	T	7976.29	PASS	AB=1.000;AC=45;AF=0.833;AN=54;BaseQRankSum=-7.749;DP=252;FS=10.295;HRun=0;HaplotypeScore=54.8882;InbreedingCoeff=0.6472;MQ=68.19;MQ0=4;MQRankSum=-3.788;QD=39.88;ReadPosRankSum=2.387;VQSLOD=5.4387;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:20:1.41:0,1,121	1/1:0,6:6:12.04:214,12,0	0/0:18,0:9:27.08:0,27,434	0/0:12,0:7:17.62:0,18,200	1/1:1,14:15:41.94:591,42,0	1/1:0,9:9:18.06:324,18,0	1/1:0,3:3:9.03:160,9,0	1/1:0,22:22:66.05:1011,66,0	1/1:0,3:3:3.01:53,3,0	1/1:0,6:6:18.06:305,18,0	1/1:0,2:3:9.03:120,9,0	1/1:1,8:9:21.07:381,21,0	1/1:0,8:8:21.07:355,21,0	1/1:1,11:12:33.11:597,33,0	1/1:0,7:7:12.51:218,13,0	0/0:2,0:2:5.96:0,6,43	1/1:0,23:24:51.16:926,51,0	0/1:16,0:16:18.71:150,0,19	1/1:0,10:10:27.09:480,27,0	1/1:0,6:6:18.06:323,18,0	1/1:0,3:3:9.03:163,9,0	./.	1/1:0,5:4:8.78:137,9,0	1/1:0,3:3:9.03:162,9,0	1/1:2,7:9:18.06:325,18,0	1/1:0,8:8:24.05:377,24,0	1/1:0,8:8:21.07:380,21,0	1/1:1,4:5:15.02:225,15,0
chr10	96816019	.	TAAA	T	4961.57	PASS	AB=0.533;AC=45;AF=0.833;AN=54;BaseQRankSum=-5.225;DP=254;FS=7.914;HRun=11;HaplotypeScore=66.5881;InbreedingCoeff=0.7531;MQ=68.13;MQ0=4;MQRankSum=-3.926;QD=24.81;ReadPosRankSum=2.861;VQSLOD=3.1883;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:59.52:0,60,708	1/1:6,0:6:12.03:127,12,0	0/0:18,0:9:27.09:0,27,402	0/0:12,0:7:17.60:0,18,212	1/1:15,0:15:33.53:323,34,0	1/1:9,0:9:18.05:204,18,0	1/1:3,0:3:9.03:106,9,0	1/1:22,0:22:52.36:525,52,0	1/1:3,0:3:3.01:35,3,0	1/1:6,0:6:17.77:164,18,0	1/1:3,0:3:8.84:68,9,0	1/1:9,0:9:21.05:225,21,0	1/1:8,0:8:20.85:215,21,0	1/1:12,0:12:33.08:356,33,0	1/1:7,0:7:12.50:128,12,0	0/0:2,0:2:6.02:0,6,87	1/1:24,0:24:51.10:537,51,0	0/1:2,14:16:0.62:470,0,1	1/1:10,0:10:27.03:274,27,0	1/1:6,0:6:18.05:205,18,0	1/1:3,0:3:9.02:95,9,0	./.	1/1:5,0:4:8.49:85,8,0	1/1:3,0:3:9.02:101,9,0	1/1:9,0:9:18.04:195,18,0	1/1:8,0:8:20.25:186,20,0	1/1:8,0:8:21.05:225,21,0	1/1:5,0:5:11.98:109,12,0
chr10	96819050	.	A	AAC	2175.13	PASS	AB=0.971;AC=42;AF=0.875;AN=48;BaseQRankSum=0.392;DP=467;FS=0.000;HRun=0;HaplotypeScore=86.1371;InbreedingCoeff=0.2466;MQ=69.38;MQ0=12;MQRankSum=-1.713;QD=6.03;ReadPosRankSum=-1.598;VQSLOD=2.5863;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:6,0:7:11.93:136,12,0	./.	./.	0/1:16,1:17:7.70:89,0,8	1/1:15,0:16:14.96:136,15,0	1/1:23,0:22:12.03:145,12,0	1/1:23,0:23:10.10:58,10,0	1/1:11,1:12:8.96:70,9,0	1/1:19,0:18:8.96:96,9,0	1/1:11,1:12:6.02:73,6,0	1/1:13,0:13:6:64,6,0	1/1:16,0:16:11.68:105,12,0	1/1:14,0:13:12:131,12,0	0/1:12,0:12:0:0,0,0	./.	1/1:21,1:21:15.03:183,15,0	0/0:13,0:12:4.26:0,4,62	0/1:11,0:11:0:0,0,0	1/1:11,0:11:9.03:114,9,0	1/1:26,1:25:17.41:199,17,0	1/1:10,0:12:5.99:50,6,0	1/1:15,0:14:9.03:128,9,0	0/1:29,0:30:3.81:205,0,4	1/1:14,0:14:8.97:72,9,0	1/1:19,0:19:4.58:86,5,0	1/1:6,0:7:9.01:108,9,0	1/1:6,0:8:3:26,3,0
chr10	96819117	.	GCAGA	G	9560.98	PASS	AB=0.611;AC=51;AF=0.911;AN=56;BaseQRankSum=1.825;DP=434;FS=2.360;HRun=0;HaplotypeScore=109.8184;InbreedingCoeff=0.6637;MQ=56.85;MQ0=1;MQRankSum=-3.870;QD=24.33;ReadPosRankSum=2.634;VQSLOD=4.6941;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:23:45.15:732,45,0	1/1:2,4:6:9.03:146,9,0	0/0:23,0:16:21.07:0,21,463	0/0:18,0:15:15.05:0,15,337	1/1:4,13:17:23.90:288,24,0	1/1:6,10:16:24.08:390,24,0	1/1:4,7:11:21.07:330,21,0	1/1:10,10:20:30.01:400,30,0	1/1:6,11:17:30.10:488,30,0	1/1:9,10:19:27.09:439,27,0	1/1:1,5:6:12.04:195,12,0	1/1:2,6:8:15.05:244,15,0	1/1:10,6:16:15.05:244,15,0	1/1:4,6:10:18.06:293,18,0	1/1:8,8:16:33.09:489,33,0	1/1:3,4:7:6.02:98,6,0	1/1:8,12:19:27.09:439,27,0	0/1:4,7:11:15.05:314,0,15	1/1:5,5:11:11.97:141,12,0	1/1:1,7:8:14.57:124,15,0	1/1:15,19:33:42.14:683,42,0	1/1:8,15:23:36.12:561,36,0	1/1:2,7:9:17.95:233,18,0	1/1:3,15:18:30.10:488,30,0	1/1:7,11:18:23.81:379,24,0	1/1:8,12:20:36:497,36,0	1/1:7,18:25:48.16:780,48,0	1/1:1,3:4:9.03:146,9,0
chr10	96819480	.	C	CAATAACAAT	19947.10	PASS	AB=0.867;AC=26;AF=0.464;AN=56;BaseQRankSum=-2.396;DP=784;FS=10.119;HRun=0;HaplotypeScore=278.2850;InbreedingCoeff=-0.7029;MQ=51.74;MQ0=2;MQRankSum=-4.014;QD=27.70;ReadPosRankSum=4.500;VQSLOD=2.8096;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:36:19.89:20,0,493	0/1:12,3:15:96.67:503,0,97	0/0:24,0:22:49.46:0,49,848	0/0:25,0:23:20.69:0,21,699	0/1:31,5:36:99:891,0,160	0/1:18,5:23:55.75:771,0,56	0/1:22,1:23:99:142,0,155	0/1:34,0:34:99:206,0,192	0/1:25,13:39:99:1968,0,109	0/1:41,5:47:91.73:1875,0,92	0/1:21,7:28:99:907,0,128	0/1:27,6:33:90.15:878,0,90	0/1:19,6:25:99:789,0,125	0/1:19,4:22:99:630,0,151	0/1:33,10:43:99:1379,0,211	0/0:13,0:13:23.27:0,23,362	0/1:21,0:21:69.68:608,0,70	1/1:6,1:20:14.57:265,15,0	0/1:33,4:36:99:1180,0,129	0/1:26,5:31:99:828,0,131	0/1:20,0:20:55.32:260,0,55	0/1:29,5:34:99:833,0,140	0/1:14,2:15:23.27:473,0,23	0/1:20,4:24:4.02:793,0,4	0/1:22,2:24:99:259,0,110	0/1:33,6:39:99:1323,0,203	0/1:26,13:39:99:1840,0,114	0/1:5,0:9:51.63:328,0,52
chr10	96819488	.	ACAAC	A	49.17	PASS	AB=0.620;AC=1;AF=0.018;AN=56;BaseQRankSum=-1.792;DP=777;FS=1.567;HRun=0;HaplotypeScore=286.3308;InbreedingCoeff=-0.0186;MQ=52.37;MQ0=2;MQRankSum=-1.583;QD=1.00;ReadPosRankSum=-2.080;VQSLOD=1.9464;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,30:49:99:124,0,702	0/0:14,0:14:42.13:0,42,759	0/0:23,0:21:60.01:0,60,867	0/0:22,0:18:36.54:0,37,620	0/0:33,0:33:71.76:0,72,1072	0/0:26,0:26:65.56:0,66,1087	0/0:24,0:24:53.46:0,53,834	0/0:34,0:34:99:0,102,1407	0/0:41,0:41:99:0,102,1663	0/0:46,0:46:99:0,123,1899	0/0:27,0:27:57.34:0,57,1047	0/0:30,0:30:62.33:0,62,903	0/0:26,0:26:63.15:0,63,1109	0/0:23,0:22:59.83:0,60,901	0/0:41,0:41:96.30:0,96,1708	0/0:12,0:12:30.09:0,30,417	0/0:23,0:23:55.89:0,56,570	0/0:14,0:13:17.88:0,18,147	0/0:31,0:30:86.76:0,87,1206	0/0:31,0:31:80.75:0,81,1290	0/0:20,0:20:32.50:0,32,397	0/0:34,0:34:68.63:0,69,956	0/0:16,0:15:23.89:0,24,406	0/0:24,0:24:36.47:0,36,527	0/0:24,0:24:42.14:0,42,800	0/0:38,0:38:99:0,102,1555	0/0:41,0:41:99:0,99,1784	0/0:10,0:10:30.03:0,30,540
chr10	96819494	.	A	AC	17443.02	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-0.534;DP=759;FS=0.508;HRun=0;HaplotypeScore=193.3462;InbreedingCoeff=0.9966;MQ=54.46;MQ0=2;MQRankSum=-4.541;QD=27.30;ReadPosRankSum=5.352;VQSLOD=4.3524;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:26.11:0,26,277	1/1:0,12:15:45.03:520,45,0	0/0:21,0:19:41.14:0,41,515	0/0:19,0:16:33.31:0,33,351	1/1:1,26:32:78.13:900,78,0	1/1:0,20:25:63.19:752,63,0	1/1:1,24:26:44.51:664,45,0	1/1:2,33:35:98.85:986,99,0	1/1:0,26:40:96.28:1148,96,0	1/1:2,34:42:99:1139,103,0	1/1:1,19:27:69.08:795,69,0	1/1:1,22:29:60.18:719,60,0	1/1:0,24:30:72.20:846,72,0	1/1:1,16:20:57.18:698,57,0	1/1:0,31:41:99:1231,99,0	0/0:16,0:16:21.58:0,22,141	1/1:7,13:20:45.99:476,46,0	0/0:16,0:15:18.60:0,19,97	1/1:5,20:28:47.24:734,47,0	1/1:1,24:30:78.07:889,78,0	1/1:1,17:18:34.13:365,34,0	1/1:0,26:31:60.18:738,60,0	1/1:0,15:17:27.08:319,27,0	1/1:0,16:20:32.28:382,32,0	1/1:0,23:25:42.13:517,42,0	1/1:0,29:35:95.92:1074,96,0	1/1:0,27:40:99:1201,99,0	1/1:0,8:11:30.09:351,30,0
chr10	96820780	.	T	TA	8257.25	PASS	AB=0.565;AC=43;AF=0.768;AN=56;BaseQRankSum=-7.067;DP=490;FS=9.577;HRun=10;HaplotypeScore=59.4972;InbreedingCoeff=0.7438;MQ=73.28;MQ0=1;MQRankSum=-0.646;QD=21.90;ReadPosRankSum=1.593;VQSLOD=5.5970;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:80.89:0,81,664	1/1:2,3:5:9.02:96,9,0	0/0:20,0:16:22.19:0,22,147	0/0:24,0:20:33.99:0,34,254	1/1:5,10:15:2.98:233,3,0	1/1:6,16:22:7.10:407,7,0	1/1:2,23:25:65.90:704,66,0	1/1:6,19:26:31.56:557,32,0	1/1:2,12:14:33.08:351,33,0	1/1:9,20:29:63.16:669,63,0	0/1:3,15:18:1.21:387,0,1	0/1:3,6:9:0.99:178,0,1	1/1:4,17:21:48.12:512,48,0	1/1:2,15:18:33.49:381,33,0	1/1:1,10:11:24.06:256,24,0	0/0:15,0:16:40.97:0,41,326	1/1:0,19:20:44.98:463,45,0	0/0:17,0:17:44.93:0,45,369	1/1:0,3:3:9.02:96,9,0	1/1:2,15:17:42.11:448,42,0	1/1:3,14:17:20.47:423,20,0	1/1:3,16:19:33:337,33,0	1/1:7,11:19:11.36:309,11,0	0/1:2,9:11:0.58:200,0,1	1/1:3,11:14:24.06:256,24,0	1/1:2,15:17:47.84:484,48,0	1/1:3,11:14:21.05:224,21,0	1/1:2,11:13:27.07:288,27,0
chr10	96821579	.	C	CT	821.87	PASS	AB=0.500;AC=25;AF=0.568;AN=44;BaseQRankSum=1.292;DP=63;FS=14.900;HRun=1;HaplotypeScore=109.6443;InbreedingCoeff=0.3761;MQ=43.03;MQ0=0;MQRankSum=-1.057;QD=21.63;ReadPosRankSum=4.932;VQSLOD=2.6190;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:0,7:7:0.28:86,0,0	1/1:0,2:2:3.01:48,3,0	./.	0/0:1,0:0:3:0,3,25	./.	0/0:1,1:2:0.47:0,0,1	1/1:0,2:2:2.69:47,3,0	0/0:2,0:2:4.41:0,4,14	1/1:0,1:1:3.01:48,3,0	./.	0/0:1,1:2:3.11:0,3,8	0/0:1,3:4:0.47:0,0,1	1/1:2,1:3:5.85:68,6,0	1/1:1,2:3:6.02:96,6,0	1/1:1,2:3:3.01:48,3,0	./.	1/1:0,4:4:7.73:141,8,0	1/1:0,3:3:9.03:144,9,0	1/1:0,1:1:3.01:48,3,0	0/0:2,2:4:2.75:0,3,7	0/0:1,1:2:2.37:0,2,8	1/1:0,1:1:0.47:1,0,0	0/0:1,2:3:3.11:0,3,8	1/1:1,2:3:2.77:47,3,0	0/0:1,1:2:0.47:0,0,1	./.	1/1:2,3:5:9:116,9,0	./.
chr10	96821607	.	T	TA	7009.61	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=1.132;DP=175;FS=0.000;HRun=0;HaplotypeScore=220.2674;InbreedingCoeff=0.4100;MQ=39.56;MQ0=0;MQRankSum=-1.399;QD=40.52;ReadPosRankSum=1.502;VQSLOD=4.0360;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:50.62:659,51,0	1/1:0,4:4:12.04:190,12,0	./.	0/0:2,0:2:3.01:0,3,42	1/1:0,4:4:5.85:34,6,0	1/1:0,5:5:15.05:235,15,0	1/1:0,7:7:20.99:298,21,0	1/1:0,11:11:30.06:418,30,0	1/1:0,9:9:27.09:427,27,0	1/1:1,6:7:18.06:286,18,0	1/1:0,5:4:6.69:114,7,0	1/1:0,6:6:18.06:280,18,0	1/1:0,6:6:17.92:225,18,0	1/1:0,6:6:18.06:277,18,0	1/1:0,11:11:33.11:521,33,0	1/1:0,8:8:24.08:380,24,0	1/1:0,11:11:27.09:423,27,0	1/1:0,3:3:9.03:143,9,0	1/1:0,5:5:15.05:238,15,0	1/1:0,4:4:11.57:64,12,0	1/1:0,5:5:15.05:210,15,0	1/1:0,2:3:9.03:129,9,0	1/1:0,5:5:14.67:127,15,0	1/1:0,3:3:6.02:95,6,0	1/1:0,8:8:23.95:318,24,0	1/1:0,7:7:21.07:332,21,0	1/1:0,11:11:33.03:491,33,0	1/1:0,2:2:6.02:94,6,0
chr10	96821609	.	C	CA	4488.49	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=1.482;DP=175;FS=0.000;HRun=1;HaplotypeScore=229.6023;InbreedingCoeff=0.4020;MQ=39.56;MQ0=0;MQRankSum=-2.316;QD=25.95;ReadPosRankSum=2.018;VQSLOD=4.4009;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:51.01:474,51,0	1/1:0,4:4:11.99:104,12,0	./.	0/0:2,0:2:3.01:0,3,39	1/1:0,4:4:6.01:62,6,0	1/1:0,5:5:15:135,15,0	1/1:0,7:7:20.97:193,21,0	1/1:1,10:11:28.37:231,28,0	1/1:0,9:9:27.04:258,27,0	1/1:0,7:7:18.03:178,18,0	1/1:0,5:4:6.65:70,7,0	1/1:0,6:6:18.03:181,18,0	1/1:0,6:6:18.03:177,18,0	1/1:0,6:6:18:173,18,0	1/1:0,11:11:33.02:303,33,0	1/1:0,8:8:24.03:229,24,0	1/1:0,11:11:26.94:233,27,0	1/1:0,3:3:9:80,9,0	1/1:0,5:5:15.01:141,15,0	1/1:0,4:4:12.02:116,12,0	1/1:0,5:5:11.75:107,12,0	1/1:2,1:3:8.03:56,8,0	1/1:0,5:5:15.02:145,15,0	1/1:0,3:3:6:52,6,0	1/1:0,8:8:24.02:223,24,0	1/1:0,7:7:21.02:207,21,0	1/1:0,11:11:32.91:303,33,0	1/1:0,2:2:6.01:57,6,0
chr10	96821612	.	CA	C	2201.87	PASS	AB=0.750;AC=51;AF=0.981;AN=52;BaseQRankSum=-0.603;DP=175;FS=0.000;HRun=5;HaplotypeScore=237.7637;InbreedingCoeff=-0.0238;MQ=39.56;MQ0=0;MQRankSum=0.186;QD=12.73;ReadPosRankSum=-0.171;VQSLOD=0.8285;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:47.77:225,48,0	1/1:0,4:4:11.02:49,11,0	./.	./.	1/1:0,4:4:5.19:20,5,0	1/1:0,5:5:14.02:66,14,0	1/1:1,6:7:16.78:75,17,0	1/1:1,10:11:23.88:136,24,0	1/1:0,9:9:25.68:133,26,0	1/1:0,7:7:20.62:142,21,0	1/1:0,5:4:10.73:54,11,0	1/1:1,5:6:16.76:79,17,0	1/1:0,6:6:16.82:79,17,0	1/1:0,6:6:12.52:61,13,0	1/1:0,11:11:30.96:150,31,0	1/1:0,8:8:22.90:118,23,0	1/1:0,11:11:28.41:155,28,0	1/1:0,3:3:8.75:51,9,0	1/1:0,5:5:14.66:88,15,0	1/1:0,4:4:11.03:49,11,0	1/1:0,5:5:11.04:51,11,0	0/1:2,1:3:0.46:27,0,0	1/1:0,5:5:13.31:56,13,0	1/1:0,3:3:5.39:23,5,0	1/1:0,8:8:22.12:100,22,0	1/1:0,7:7:20.46:119,20,0	1/1:0,11:11:28.97:142,29,0	1/1:0,2:2:5.78:31,6,0
chr10	96821630	.	GC	G	9414.63	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=1.283;DP=292;FS=3.197;HRun=3;HaplotypeScore=307.6612;InbreedingCoeff=0.6492;MQ=35.59;MQ0=0;MQRankSum=-1.732;QD=32.46;ReadPosRankSum=1.058;VQSLOD=3.1108;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:51.12:602,51,0	1/1:0,9:9:24.08:294,24,0	./.	0/0:2,0:2:2.99:0,3,24	1/1:0,12:12:27.08:325,27,0	1/1:0,9:9:27.08:328,27,0	1/1:0,9:9:21.06:255,21,0	1/1:3,11:14:33.58:408,34,0	1/1:0,15:15:41.34:485,41,0	1/1:1,15:16:45.12:542,45,0	1/1:0,8:7:18.06:217,18,0	1/1:0,12:12:36.11:436,36,0	1/1:0,12:12:33.10:403,33,0	1/1:0,20:20:54.16:645,54,0	1/1:0,14:14:42.13:514,42,0	1/1:0,12:12:33.10:401,33,0	1/1:0,12:12:33.10:399,33,0	1/1:0,4:4:12.04:148,12,0	1/1:0,14:14:39.12:480,39,0	1/1:0,9:9:24.07:292,24,0	1/1:0,5:5:12:130,12,0	1/1:0,8:8:21.07:255,21,0	1/1:0,10:10:21.04:254,21,0	1/1:1,3:4:9.03:111,9,0	1/1:0,9:9:27.08:329,27,0	1/1:0,10:10:30.09:370,30,0	1/1:0,19:19:54.16:646,54,0	1/1:0,5:4:12.04:147,12,0
chr10	96821641	.	G	GT	14992.03	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=0.393;DP=385;FS=3.022;HRun=1;HaplotypeScore=340.5946;InbreedingCoeff=0.7009;MQ=34.11;MQ0=0;MQRankSum=-1.732;QD=39.25;ReadPosRankSum=0.315;VQSLOD=3.3722;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:47.99:630,48,0	1/1:0,12:12:33.11:467,33,0	./.	0/0:2,0:2:3:0,3,26	1/1:0,14:14:36.12:511,36,0	1/1:0,11:11:33.11:473,33,0	1/1:4,10:14:36.12:515,36,0	1/1:6,17:23:60.13:834,60,0	1/1:1,17:18:53.83:730,54,0	1/1:3,23:26:78.17:1096,78,0	1/1:0,11:10:30.10:412,30,0	1/1:0,14:14:42.14:595,42,0	1/1:2,13:15:39.13:569,39,0	1/1:0,22:22:66.22:921,66,0	1/1:0,19:19:57.19:823,57,0	1/1:0,14:14:42.14:616,42,0	1/1:1,12:13:36.12:525,36,0	1/1:2,3:5:12.04:178,12,0	1/1:6,17:23:63.11:861,63,0	1/1:0,11:11:33.11:476,33,0	1/1:1,7:8:17.77:257,18,0	1/1:2,10:12:33.04:451,33,0	1/1:0,11:10:33.11:466,33,0	1/1:0,3:3:9.03:131,9,0	1/1:3,12:15:35.79:485,36,0	1/1:3,13:16:48.12:673,48,0	1/1:1,24:24:75.21:1041,75,0	1/1:3,4:6:18.06:255,18,0
chr10	96821646	.	GC	G	13016.56	PASS	AC=54;AF=0.964;AN=56;BaseQRankSum=0.312;DP=391;FS=3.058;HRun=2;HaplotypeScore=325.7200;InbreedingCoeff=0.6495;MQ=36.95;MQ0=0;MQRankSum=-1.723;QD=33.46;ReadPosRankSum=0.606;VQSLOD=3.4976;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:19:41.66:491,42,0	1/1:0,12:12:33.07:395,33,0	1/1:2,0:1:1.25:3,1,0	0/0:2,0:2:2.99:0,3,23	1/1:0,14:14:36.11:440,36,0	1/1:0,13:13:33.11:414,33,0	1/1:2,12:14:38.96:426,39,0	1/1:7,15:22:62.86:681,63,0	1/1:1,17:18:53.53:645,54,0	1/1:1,24:25:75.20:935,75,0	1/1:1,10:10:30.01:336,30,0	1/1:0,14:14:42.12:508,42,0	1/1:1,15:16:42.13:526,42,0	1/1:1,22:23:66.14:780,66,0	1/1:0,19:19:57.18:713,57,0	1/1:0,14:14:42.13:528,42,0	1/1:0,12:12:36.01:432,36,0	1/1:1,4:5:12.04:151,12,0	1/1:4,18:22:63.07:733,63,0	1/1:0,12:12:33.05:389,33,0	1/1:2,5:7:17.96:190,18,0	1/1:0,12:12:33.10:409,33,0	1/1:0,11:11:33.05:390,33,0	1/1:0,3:3:8.92:74,9,0	1/1:0,15:15:44.35:535,44,0	1/1:0,18:18:54.13:665,54,0	1/1:1,26:27:78.16:926,78,0	1/1:1,8:8:24.08:300,24,0
chr10	96821647	.	CCT	C	1071.44	PASS	AB=0.990;AC=40;AF=0.714;AN=56;BaseQRankSum=6.661;DP=410;FS=16.763;HRun=0;HaplotypeScore=377.8126;InbreedingCoeff=-0.1609;MQ=37.58;MQ0=0;MQRankSum=-1.889;QD=2.63;ReadPosRankSum=5.321;VQSLOD=0.7893;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:18.06:57,18,0	0/1:13,0:13:10.50:10,0,16	0/1:3,0:2:22.98:23,0,24	0/0:2,0:2:3.01:0,3,38	1/1:14,0:14:10.93:25,11,0	0/1:13,0:13:3.15:17,0,3	0/1:15,1:16:33.95:68,0,34	0/1:22,1:23:0.91:138,0,1	0/1:18,0:19:2.15:26,0,2	1/1:25,0:25:38.18:106,38,0	1/1:10,1:10:13.37:86,13,0	1/1:15,0:15:7.49:24,7,0	0/1:18,0:18:18.76:19,0,31	0/1:23,0:23:17.27:37,0,17	1/1:19,0:19:23.57:56,24,0	1/1:14,0:14:18.06:44,18,0	1/1:14,0:14:17.28:55,17,0	0/1:6,0:6:4.60:5,0,12	1/1:21,0:21:20.30:111,20,0	1/1:12,0:12:10.05:23,10,0	1/1:7,0:7:11.21:51,11,0	0/1:13,0:13:13.32:13,0,19	0/1:13,0:12:24.46:24,0,27	1/1:4,0:4:6.80:39,7,0	0/1:15,0:15:7.23:24,0,7	1/1:18,0:18:24.06:57,24,0	0/1:27,1:27:10.71:75,0,11	0/1:10,0:10:8.08:8,0,40
chr10	96822182	.	GT	G	4791.89	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=-8.163;DP=490;FS=8.584;HRun=11;HaplotypeScore=77.8776;InbreedingCoeff=0.6352;MQ=60.02;MQ0=8;MQRankSum=2.730;QD=11.46;ReadPosRankSum=3.215;VQSLOD=4.0860;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:28:17.91:18,0,245	1/1:7,5:12:17.95:146,18,0	0/0:37,0:17:18.83:0,19,169	0/1:31,0:13:2.79:3,0,82	1/1:9,14:23:33.65:315,34,0	1/1:3,12:15:35.76:295,36,0	1/1:8,4:11:20.59:152,21,0	1/1:16,15:32:37.76:397,38,0	1/1:0,15:15:38.96:324,39,0	1/1:9,16:25:40.53:325,41,0	1/1:7,7:12:26.94:220,27,0	1/1:2,5:6:17.89:139,18,0	1/1:2,2:4:5.98:49,6,0	1/1:3,3:6:5.99:49,6,0	1/1:7,14:21:32.93:272,33,0	0/0:15,0:15:36.23:0,36,316	1/1:9,13:21:39.64:309,40,0	0/0:18,0:19:30.42:0,30,277	1/1:5,10:14:25.74:202,26,0	1/1:6,15:21:41.88:340,42,0	1/1:8,4:12:10.45:78,10,0	1/1:8,5:13:14.83:123,15,0	1/1:10,6:16:16.19:127,16,0	1/1:2,8:10:17.80:147,18,0	1/1:9,13:21:3.50:238,4,0	1/1:6,9:16:31.99:252,32,0	1/1:10,11:20:29.93:247,30,0	1/1:2,1:2:3:25,3,0
chr10	96822848	.	A	AC	137.81	PASS	AB=0.867;AC=4;AF=0.074;AN=54;BaseQRankSum=-2.756;DP=498;FS=0.000;HRun=1;HaplotypeScore=134.9960;InbreedingCoeff=0.3105;MQ=45.17;MQ0=28;MQRankSum=0.549;QD=3.72;ReadPosRankSum=-1.231;VQSLOD=-0.3791;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,3:12:10.52:0,11,79	0/0:9,0:7:2.98:0,3,21	0/1:14,0:4:1.22:1,0,6	0/0:8,0:1:3.01:0,3,36	0/0:10,0:10:5.96:0,6,42	0/0:22,0:21:30.21:0,30,251	0/0:27,0:25:41.84:0,42,350	0/0:18,0:13:7.81:0,8,94	0/0:18,0:17:31.97:0,32,266	0/0:12,0:12:23.59:0,24,171	0/0:8,0:8:6.44:0,6,46	0/0:31,0:30:47.70:0,48,394	0/0:16,0:16:27.14:0,27,244	0/0:21,0:20:5.53:0,6,48	0/0:19,0:17:24.41:0,24,212	0/1:7,4:11:48.11:48,0,75	0/0:20,0:20:38.76:0,39,344	1/1:11,0:11:23.40:192,23,0	0/0:11,0:11:17.88:0,18,139	0/0:9,0:8:5.97:0,6,50	0/0:59,0:55:14.18:0,14,316	0/0:18,0:17:22.98:0,23,167	0/0:19,0:18:14.51:0,15,135	0/0:41,0:37:65.38:0,65,625	0/0:14,0:14:5.59:0,6,42	0/0:17,0:17:39.10:0,39,306	0/0:15,0:15:10.02:0,10,92	./.
chr10	96822850	.	ACCAC	A	4840.11	PASS	AB=0.945;AC=42;AF=0.778;AN=54;BaseQRankSum=-2.358;DP=501;FS=5.428;HRun=0;HaplotypeScore=129.6334;InbreedingCoeff=0.2888;MQ=45.37;MQ0=27;MQRankSum=2.351;QD=10.90;ReadPosRankSum=2.224;VQSLOD=4.2200;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:15:79.75:80,0,133	1/1:5,4:7:2.99:24,3,0	0/0:17,0:4:4.82:0,5,58	0/0:8,0:1:2.68:0,3,11	1/1:10,0:10:3:26,3,0	1/1:17,3:20:23.50:337,23,0	1/1:23,2:25:36.92:508,37,0	1/1:11,8:14:11.95:157,12,0	1/1:14,2:16:32.07:324,32,0	1/1:11,0:11:20.22:158,20,0	1/1:5,2:8:1.59:21,2,0	1/1:27,2:30:39.98:520,40,0	1/1:14,2:16:7.50:170,8,0	1/1:9,10:20:6.39:78,6,0	1/1:13,4:17:20.44:243,20,0	0/1:10,0:10:33.02:33,0,168	1/1:15,3:19:33.82:386,34,0	0/0:12,0:12:26.32:0,26,485	1/1:8,4:12:20.80:187,21,0	1/1:8,0:7:5.95:42,6,0	0/1:55,2:56:92.73:273,0,93	0/1:15,1:17:13.57:225,0,14	1/1:18,1:18:10.36:129,10,0	1/1:30,8:36:53.53:546,54,0	0/0:7,8:15:0.45:0,0,1	1/1:18,0:18:27.56:212,28,0	1/1:4,10:14:12.43:162,12,0	./.
chr10	96822851	.	C	CA	5119.90	PASS	AB=0.886;AC=45;AF=0.804;AN=56;BaseQRankSum=1.367;DP=441;FS=15.070;HRun=1;HaplotypeScore=105.5331;InbreedingCoeff=0.2317;MQ=47.10;MQ0=27;MQRankSum=4.311;QD=12.34;ReadPosRankSum=2.198;VQSLOD=2.3405;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,2:11:37.78:79,0,38	1/1:6,2:6:2.94:46,3,0	0/1:17,0:4:4.65:5,0,24	0/0:9,0:1:3.01:0,3,30	1/1:1,5:6:3.01:46,3,0	1/1:16,5:20:31.80:318,32,0	1/1:20,4:23:41.42:404,41,0	0/1:16,1:12:13.83:21,0,14	1/1:10,5:14:25.79:348,26,0	1/1:8,4:12:16.99:241,17,0	1/1:3,2:5:2.54:44,3,0	1/1:14,12:25:38.79:412,39,0	1/1:9,4:13:24.86:195,25,0	1/1:15,1:15:6.25:27,6,0	1/1:15,1:15:20.83:244,21,0	0/1:7,3:10:24.16:133,0,24	1/1:17,3:20:33.87:395,34,0	0/0:12,0:12:27.79:0,28,265	1/1:7,3:11:0.60:136,1,0	1/1:5,2:6:5.98:60,6,0	0/1:41,7:46:5.11:483,0,5	1/1:11,4:14:22.15:239,22,0	1/1:11,4:14:14.39:138,14,0	1/1:32,5:33:65.99:689,66,0	1/1:8,4:12:3.01:39,3,0	1/1:8,6:14:19.70:302,20,0	1/1:12,2:14:10.49:76,10,0	0/0:5,0:5:2.74:0,3,12
chr10	96822852	.	CACCA	C	1506.27	PASS	AB=0.991;AC=26;AF=0.464;AN=56;BaseQRankSum=-4.354;DP=438;FS=1.863;HRun=0;HaplotypeScore=127.5424;InbreedingCoeff=-0.1869;MQ=47.32;MQ0=27;MQRankSum=-0.541;QD=4.10;ReadPosRankSum=0.475;VQSLOD=2.6576;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:10:11:11,0,168	0/1:8,0:6:0:1,0,0	0/0:19,0:5:11:0,11,149	0/0:9,0:1:3.01:0,3,30	1/1:6,0:6:1.55:4,2,0	0/1:20,0:19:24.59:130,0,25	1/1:28,0:26:18.90:260,19,0	0/1:17,0:12:42.34:42,0,116	0/1:16,0:15:3.01:110,0,3	0/1:12,1:13:32.61:46,0,33	0/0:5,0:5:0.84:0,1,2	0/1:25,0:24:7.34:209,0,7	0/1:13,0:13:37.90:45,0,38	1/1:15,1:15:5.26:46,5,0	0/1:16,0:15:32.66:88,0,33	0/0:9,0:9:6.56:0,7,244	0/1:20,0:20:41.43:162,0,41	0/0:12,0:12:29.53:0,30,594	0/1:11,0:11:30.50:31,0,65	0/1:6,0:5:0:0,0,0	0/1:48,0:44:26.14:26,0,212	0/1:15,0:14:46.65:63,0,47	1/1:14,0:13:3.79:55,4,0	0/1:37,0:33:77.47:189,0,77	0/0:12,0:12:2.92:0,3,18	0/1:11,1:12:13.44:13,0,43	1/1:12,1:14:11.65:125,12,0	0/0:5,0:5:2.96:0,3,19
chr10	96822853	.	AC	A	2447.36	PASS	AB=0.935;AC=39;AF=0.696;AN=56;BaseQRankSum=3.458;DP=440;FS=10.298;HRun=2;HaplotypeScore=111.0763;InbreedingCoeff=0.0756;MQ=47.36;MQ0=26;MQRankSum=3.440;QD=6.24;ReadPosRankSum=2.827;VQSLOD=0.0249;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:10:7.48:7,0,102	1/1:6,2:6:3.45:22,3,0	0/0:20,1:6:3.97:0,4,82	0/0:10,0:2:3.01:0,3,35	1/1:5,1:6:2.97:20,3,0	1/1:16,4:19:30.53:200,31,0	1/1:24,4:26:40.13:300,40,0	0/1:17,0:12:28.08:28,0,239	1/1:13,4:16:31.46:222,31,0	0/1:12,1:13:42.70:130,0,43	1/1:3,2:5:1.88:19,2,0	1/1:22,3:24:38.43:241,38,0	1/1:11,2:13:13.82:90,14,0	1/1:14,2:15:5.68:23,6,0	1/1:15,2:16:22.33:138,22,0	0/1:9,0:9:2.57:3,0,85	0/1:18,2:20:19.03:247,0,19	0/0:12,0:12:30.08:0,30,414	0/1:9,1:10:34.04:34,0,82	1/1:6,1:6:2.98:22,3,0	0/1:44,3:43:55.33:143,0,55	0/1:12,2:14:12.76:89,0,13	1/1:11,2:12:10.52:72,11,0	1/1:34,3:33:61.50:407,62,0	1/1:11,1:12:2.84:14,3,0	0/1:10,2:12:37.25:93,0,37	1/1:13,1:14:9.38:45,9,0	0/0:5,0:5:3.01:0,3,36
chr10	96822854	.	C	CA	4021.28	PASS	AB=0.915;AC=37;AF=0.661;AN=56;BaseQRankSum=1.609;DP=449;FS=4.822;HRun=1;HaplotypeScore=112.1147;InbreedingCoeff=0.0706;MQ=48.99;MQ0=25;MQRankSum=3.364;QD=10.34;ReadPosRankSum=2.383;VQSLOD=1.8576;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,1:9:32.70:33,0,96	1/1:8,0:6:2.94:46,3,0	0/0:22,0:7:4.83:0,5,96	0/0:11,0:3:3.01:0,3,32	1/1:4,2:6:3.01:46,3,0	1/1:17,3:19:31.26:318,31,0	1/1:28,0:26:23.73:331,24,0	0/1:18,0:13:28.14:28,0,267	1/1:16,1:16:27.93:305,28,0	0/1:14,2:16:48.53:209,0,49	1/1:4,1:5:2.34:44,2,0	1/1:19,6:24:36.41:421,36,0	1/1:12,1:13:20.58:148,21,0	1/1:15,1:15:5.04:22,5,0	1/1:15,1:15:18.97:159,19,0	0/0:10,0:10:15.29:0,15,110	0/1:18,3:21:31.64:373,0,32	0/0:12,0:12:30.07:0,30,388	0/1:9,1:10:78.63:79,0,79	1/1:7,1:7:3.01:31,3,0	0/1:46,1:44:84.46:240,0,84	0/1:12,2:14:26.74:183,0,27	1/1:11,2:12:10.94:128,11,0	1/1:33,4:33:62.25:591,62,0	1/1:12,1:13:3.01:39,3,0	0/1:10,2:12:55.15:189,0,55	0/1:14,1:15:21.01:57,0,21	0/0:5,0:5:3.01:0,3,42
chr10	96825226	.	C	CA	228.70	PASS	AB=0.853;AC=5;AF=0.089;AN=56;BaseQRankSum=-4.685;DP=667;FS=0.762;HRun=10;HaplotypeScore=75.7303;InbreedingCoeff=0.2401;MQ=69.37;MQ0=0;MQRankSum=-1.284;QD=3.13;ReadPosRankSum=-0.300;VQSLOD=-0.5496;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:73.92:0,74,596	0/0:18,0:18:41.91:0,42,340	0/0:21,0:19:26.46:0,26,223	0/0:16,0:14:14.20:0,14,186	0/0:29,1:31:32.87:0,33,459	0/0:28,0:28:65.88:0,66,536	0/0:17,0:18:37.57:0,38,317	0/0:23,0:24:24.28:0,24,345	0/0:27,2:29:1.89:0,2,428	0/0:23,0:24:58.93:0,59,471	0/1:21,3:24:16.06:16,0,296	0/0:15,1:16:3.94:0,4,236	0/0:28,0:28:53.80:0,54,436	0/0:15,4:20:11.98:0,12,293	0/0:21,0:21:47.92:0,48,394	0/0:23,0:23:53.90:0,54,443	0/1:17,2:19:19.03:19,0,275	1/1:1,16:17:8.45:295,8,0	0/0:18,0:17:44.93:0,45,369	0/0:38,0:38:80.64:0,81,664	0/1:9,4:13:11.01:11,0,127	0/0:28,0:28:74.87:0,75,612	0/0:30,0:30:43.14:0,43,558	0/0:21,0:20:50.93:0,51,419	0/0:20,0:20:50.93:0,51,419	0/0:32,0:33:67.87:0,68,546	0/0:44,0:44:68.94:0,69,759	0/0:16,0:16:38.74:0,39,320
chr10	96825378	.	AG	A	21284.66	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=6.186;DP=735;FS=0.000;HRun=1;HaplotypeScore=79.7320;InbreedingCoeff=0.9760;MQ=90.15;MQ0=0;MQRankSum=-7.506;QD=36.82;ReadPosRankSum=4.711;VQSLOD=5.1386;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1802	1/1:0,12:12:33.11:461,33,0	0/0:36,0:36:94.54:0,95,1531	0/0:25,0:25:66.16:0,66,956	1/1:0,30:30:81.19:1106,81,0	1/1:0,24:24:63.17:858,63,0	1/1:0,27:27:72.20:963,72,0	1/1:0,33:33:96.28:1287,96,0	1/1:0,31:31:78.26:1085,78,0	1/1:1,32:33:96.26:1292,96,0	1/1:0,22:22:59.94:762,60,0	1/1:0,24:24:54.18:738,54,0	1/1:0,20:20:57.19:788,57,0	1/1:0,28:28:75.25:1046,75,0	1/1:0,26:26:66.22:914,66,0	0/0:33,0:33:99:0,99,1552	1/1:0,34:34:84.28:1173,84,0	0/0:23,0:23:69.11:0,69,1046	1/1:0,20:20:60.14:761,60,0	1/1:0,31:31:90.30:1249,90,0	1/1:0,20:20:54.18:750,54,0	1/1:0,32:32:87.29:1203,87,0	1/1:1,21:22:54.18:753,54,0	1/1:0,27:27:60.15:815,60,0	1/1:0,16:16:45.15:629,45,0	1/1:3,29:32:93.29:1267,93,0	1/1:0,32:32:93.31:1299,93,0	1/1:0,2:2:6.02:84,6,0
chr10	96825489	.	AACACACACACACACACACAC	A	19328.49	PASS	AB=0.733;AC=46;AF=0.821;AN=56;BaseQRankSum=5.832;DP=741;FS=8.694;HRun=0;HaplotypeScore=333.9752;InbreedingCoeff=0.3691;MQ=63.16;MQ0=9;MQRankSum=-1.969;QD=29.29;ReadPosRankSum=1.660;VQSLOD=2.0920;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:26:99:236,0,176	1/1:4,1:8:9.03:439,9,0	0/0:28,0:18:6.02:0,6,220	0/0:36,0:20:6.02:0,6,124	1/1:5,12:17:20.94:663,21,0	1/1:11,17:28:21.54:1121,22,0	1/1:14,19:34:14.91:635,15,0	0/1:21,10:30:99:387,0,200	0/1:14,13:28:75.34:762,0,75	1/1:24,4:28:27.06:921,27,0	1/1:11,13:23:23.87:907,24,0	1/1:13,15:29:23.72:1259,24,0	1/1:13,13:25:14.73:800,15,0	0/1:9,16:25:12.96:311,0,13	1/1:12,23:36:26.76:1420,27,0	1/1:15,0:38:36.12:753,36,0	1/1:12,5:17:15.05:751,15,0	0/0:12,0:16:13.60:0,14,443	1/1:16,7:23:15:453,15,0	1/1:21,12:33:18.49:668,18,0	1/1:36,0:35:6:74,6,0	1/1:8,15:23:30.10:1601,30,0	1/1:7,13:21:21.54:1074,22,0	1/1:17,13:30:3.09:161,3,0	1/1:11,10:21:12.04:640,12,0	1/1:19,16:35:37.16:1391,37,0	1/1:14,17:31:27:1440,27,0	1/1:3,7:11:9.03:460,9,0
chr10	96826232	.	A	AT	700.24	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-5.005;DP=665;FS=2.264;HRun=11;HaplotypeScore=83.2306;InbreedingCoeff=0.7915;MQ=66.78;MQ0=2;MQRankSum=-0.818;QD=10.15;ReadPosRankSum=-0.577;VQSLOD=3.0381;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,20:26:21.81:392,22,0	0/0:13,0:13:35.86:0,36,279	0/0:17,0:13:11.45:0,11,70	0/1:22,0:13:6.64:7,0,39	0/0:32,0:32:68.63:0,69,529	0/0:23,0:23:53.77:0,54,418	0/0:23,0:23:56.76:0,57,441	0/0:27,1:29:25.33:0,25,369	0/0:16,0:16:38.82:0,39,298	0/0:26,0:26:47.59:0,48,362	0/0:21,0:21:47.74:0,48,368	0/0:19,0:20:43.82:0,44,329	0/0:27,0:29:84.77:0,85,639	0/0:21,0:22:43.25:0,43,324	0/0:21,0:21:44.80:0,45,346	1/1:3,18:21:42.08:426,42,0	0/0:37,0:37:99:0,108,836	0/0:19,0:18:29.74:0,30,330	0/0:20,1:21:20.33:0,20,337	0/0:33,2:35:16.20:0,16,490	0/0:38,0:38:89.48:0,89,683	0/0:13,0:14:25.93:0,26,192	0/0:21,0:21:35.26:0,35,272	0/0:24,0:24:62.65:0,63,478	0/0:27,0:29:61.73:0,62,468	0/0:27,0:27:62.74:0,63,488	0/0:24,0:27:51.82:0,52,383	0/0:11,0:12:28.90:0,29,215
chr10	96826620	.	A	AAAACAAACAAAC	35339.67	PASS	AB=0.587;AC=49;AF=0.875;AN=56;BaseQRankSum=-8.985;DP=650;FS=0.000;HRun=0;HaplotypeScore=201.1856;InbreedingCoeff=0.7901;MQ=51.38;MQ0=3;MQRankSum=-10.483;QD=63.33;ReadPosRankSum=-4.019;VQSLOD=3.8612;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:42:98.22:131,0,98	1/1:2,6:9:18.06:1026,18,0	0/0:34,0:24:33.09:0,33,660	0/0:32,0:23:26.50:0,26,680	1/1:13,13:27:51.18:2583,51,0	1/1:15,9:24:42.14:2212,42,0	1/1:16,11:29:21.07:1089,21,0	1/1:36,0:36:54.15:1843,54,0	1/1:11,7:19:24.08:1269,24,0	1/1:11,11:23:51.65:2686,52,0	1/1:12,8:22:26.63:967,27,0	1/1:10,9:20:21.07:1113,21,0	1/1:19,3:24:36.12:1962,36,0	1/1:9,1:10:12.04:695,12,0	1/1:9,14:23:48.16:2541,48,0	0/0:8,0:26:18.69:0,19,49	1/1:17,9:28:27.09:1297,27,0	1/1:15,0:15:12.04:262,12,0	1/1:17,4:21:36.10:1356,36,0	1/1:18,5:25:33.11:1476,33,0	1/1:15,0:17:21.07:691,21,0	1/1:7,6:15:30.10:1378,30,0	1/1:9,8:17:24.08:1344,24,0	1/1:17,6:23:23.38:773,23,0	1/1:8,6:14:15.05:879,15,0	1/1:8,19:28:60.21:3086,60,0	1/1:13,17:30:39.13:2210,39,0	1/1:10,0:13:9.03:472,9,0
chr10	96826786	.	AC	A	6653.67	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.017;DP=418;FS=6.960;HRun=1;HaplotypeScore=47.3745;InbreedingCoeff=0.9064;MQ=64.31;MQ0=14;MQRankSum=-1.909;QD=18.59;ReadPosRankSum=0.951;VQSLOD=4.7040;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:35.23:301,35,0	1/1:4,0:4:8.36:49,8,0	0/0:30,2:11:8.92:0,9,144	0/0:28,0:13:25.96:0,26,192	1/1:22,0:19:50.91:422,51,0	1/1:14,0:14:40.81:275,41,0	1/1:6,0:6:14.89:110,15,0	1/1:15,0:15:35:245,35,0	1/1:7,0:7:20.75:141,21,0	1/1:18,0:14:38.82:322,39,0	1/1:18,0:18:53.43:419,53,0	1/1:11,0:11:24.70:175,25,0	1/1:11,0:9:23.85:179,24,0	1/1:8,0:6:14.96:123,15,0	1/1:12,0:12:35.77:268,36,0	1/1:18,0:17:49.97:367,50,0	1/1:10,0:10:27.36:214,27,0	1/1:12,0:12:31.99:232,32,0	1/1:16,0:14:28.69:209,29,0	1/1:0,19:19:35.50:238,36,0	1/1:8,0:7:17.97:148,18,0	1/1:1,12:13:23.50:150,24,0	1/1:22,0:22:65.49:519,65,0	1/1:10,0:10:21.95:200,22,0	1/1:10,0:10:23.89:193,24,0	1/1:25,0:24:63.97:482,64,0	1/1:18,0:18:50.59:367,51,0	1/1:15,0:15:36.34:306,36,0
chr10	96827029	.	C	CAGGG	33612.78	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-13.167;DP=682;FS=1.726;HRun=0;HaplotypeScore=100.2797;InbreedingCoeff=0.9976;MQ=84.72;MQ0=0;MQRankSum=-7.978;QD=60.67;ReadPosRankSum=3.499;VQSLOD=6.6336;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.29:0,90,1617	1/1:0,7:7:21.07:554,21,0	0/0:25,0:25:62.56:0,63,1075	0/0:33,0:33:80.90:0,81,1333	1/1:4,15:20:42.14:1106,42,0	1/1:2,23:26:63.22:1662,63,0	1/1:6,23:32:66.23:1741,66,0	1/1:8,16:27:69.20:1661,69,0	1/1:2,15:19:45.15:1188,45,0	1/1:3,18:23:60.19:1408,60,0	1/1:2,11:13:27.09:712,27,0	1/1:2,20:22:57.20:1505,57,0	1/1:8,21:30:63.22:1618,63,0	1/1:0,22:22:63.22:1662,63,0	1/1:4,24:30:72.20:1802,72,0	0/0:30,0:30:90.31:0,90,1656	1/1:2,16:18:42.14:1067,42,0	0/0:9,0:9:21.07:0,21,378	1/1:4,15:19:51.17:1303,51,0	1/1:4,18:24:57.19:1403,57,0	1/1:6,53:63:99:3395,129,0	1/1:2,21:24:57.20:1501,57,0	1/1:9,16:25:39.13:1027,39,0	1/1:1,20:24:54.19:1426,54,0	1/1:0,20:19:57.15:1445,57,0	1/1:4,20:24:63.20:1496,63,0	1/1:1,31:32:84.29:2217,84,0	1/1:0,10:10:27.09:713,27,0
chr10	96827523	.	TA	T	150.89	PASS	AB=0.909;AC=3;AF=0.054;AN=56;BaseQRankSum=3.704;DP=425;FS=8.012;HRun=9;HaplotypeScore=58.3950;InbreedingCoeff=0.5451;MQ=91.69;MQ0=14;MQRankSum=-0.916;QD=6.29;ReadPosRankSum=1.148;VQSLOD=0.4328;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:38.22:0,38,256	0/0:4,0:4:8.88:0,9,74	0/0:51,0:25:17.24:0,17,164	0/0:40,0:27:15.65:0,16,269	0/0:13,0:13:29.84:0,30,241	0/0:12,0:12:33:0,33,327	0/0:17,0:17:41.99:0,42,418	0/0:7,0:7:11.99:0,12,104	0/0:18,0:17:49.64:0,50,511	0/0:17,0:17:24.06:0,24,267	0/0:17,0:17:47.42:0,47,468	0/0:14,0:14:42.03:0,42,432	0/0:11,0:10:21.02:0,21,212	0/0:6,0:5:9.02:0,9,96	0/0:18,0:18:53.75:0,54,538	0/0:9,0:9:20.45:0,20,126	0/0:20,0:20:57:0,57,578	1/1:1,13:14:27.01:244,27,0	0/0:16,0:16:44.69:0,45,463	0/0:10,0:10:30.03:0,30,299	0/0:15,0:14:33.03:0,33,337	0/0:14,1:15:8.43:0,8,291	0/0:10,0:10:21.02:0,21,227	0/0:10,0:10:25.27:0,25,285	0/0:15,0:15:30.61:0,31,333	0/1:9,1:10:3.41:3,0,178	0/0:17,0:17:33.38:0,33,487	0/0:3,0:3:3.45:0,3,22
chr10	96827532	.	A	AAG	545.71	PASS	AB=0.923;AC=7;AF=0.125;AN=56;BaseQRankSum=2.863;DP=456;FS=0.000;HRun=0;HaplotypeScore=70.5708;InbreedingCoeff=0.6890;MQ=85.56;MQ0=16;MQRankSum=-3.040;QD=13.64;ReadPosRankSum=-3.292;VQSLOD=2.7165;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,4:17:0.66:388,1,0	0/0:6,0:6:14.75:0,15,118	0/0:53,0:25:39.34:0,39,269	0/0:38,0:24:19.70:0,20,302	0/0:11,0:12:8:0,8,153	0/0:11,0:11:27.02:0,27,337	0/0:17,0:17:32.05:0,32,436	0/1:11,0:11:6.42:6,0,56	0/0:20,0:19:34.22:0,34,621	0/0:13,0:13:35.94:0,36,385	0/0:17,0:17:15.82:0,16,501	0/0:15,0:15:42.05:0,42,521	0/0:12,0:11:29.84:0,30,292	0/0:8,0:7:14.97:0,15,151	0/0:22,0:22:20.56:0,21,557	1/1:6,1:8:18.03:241,18,0	0/0:20,0:20:56.93:0,57,661	0/0:15,0:15:22.15:0,22,200	0/0:21,0:17:41.92:0,42,519	0/0:15,0:12:27.44:0,27,299	0/0:14,0:13:38.97:0,39,442	0/0:14,0:14:35.81:0,36,389	0/0:12,0:12:29.04:0,29,305	0/0:11,0:12:35.90:0,36,362	0/0:13,0:14:38.79:0,39,400	0/0:15,0:15:23.06:0,23,319	0/0:19,0:18:43.73:0,44,631	1/1:2,0:3:5.87:35,6,0
chr10	96827605	.	AAAAC	A	702.65	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.547;DP=482;FS=0.938;HRun=0;HaplotypeScore=80.8770;InbreedingCoeff=0.9516;MQ=66.98;MQ0=3;MQRankSum=0.081;QD=21.96;ReadPosRankSum=3.035;VQSLOD=3.0882;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,19:24:39.12:617,39,0	0/0:13,0:13:39.13:0,39,964	0/0:23,0:14:30.06:0,30,473	0/0:20,0:11:10.85:0,11,187	0/0:33,0:33:69.22:0,69,1525	0/0:8,0:8:24.08:0,24,540	0/0:20,0:20:36.12:0,36,836	0/0:15,0:15:33.09:0,33,648	0/0:19,0:19:51.17:0,51,1143	0/0:31,0:31:81.28:0,81,1867	0/0:21,0:21:60.16:0,60,1332	0/0:10,0:10:27.09:0,27,596	0/0:13,0:13:36.09:0,36,790	0/0:7,0:7:21.07:0,21,445	0/0:13,0:13:33.11:0,33,691	1/1:2,6:8:12.04:202,12,0	0/0:22,0:22:57.19:0,57,1368	0/0:16,0:16:36.12:0,36,839	0/0:18,0:18:48.15:0,48,956	0/0:19,0:19:42.14:0,42,940	0/0:17,0:17:48.16:0,48,1110	0/0:21,0:21:48.15:0,48,1093	0/0:23,0:23:63.22:0,63,1491	0/0:12,0:12:36.12:0,36,770	0/0:14,0:14:33.11:0,33,726	0/0:22,0:22:57.20:0,57,1369	0/0:15,0:15:45.15:0,45,988	0/0:5,0:5:15.05:0,15,320
chr10	96827815	.	AGAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGG	A	680.54	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.494;DP=487;FS=0.000;HRun=0;HaplotypeScore=371.8696;InbreedingCoeff=0.7001;MQ=61.10;MQ0=7;MQRankSum=-2.083;QD=21.95;ReadPosRankSum=2.024;VQSLOD=0.4127;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:54.18:0,54,4370	0/0:7,0:7:18.06:0,18,1505	0/0:22,0:16:6.02:0,6,104	0/0:18,0:14:12.04:0,12,587	0/0:5,0:4:3.01:0,3,338	0/0:14,0:14:33.11:0,33,2180	0/0:16,0:16:21.04:0,21,1748	1/1:27,0:26:3.01:46,3,0	0/0:14,0:14:33.11:0,33,3157	0/0:16,0:16:33.11:0,33,2478	0/0:16,0:15:27.09:0,27,1968	0/0:17,0:17:36.12:0,36,3375	0/0:7,0:7:15.05:0,15,856	0/0:12,0:12:30.10:0,30,2662	0/0:13,0:13:27.09:0,27,2028	0/0:37,0:37:63.22:0,63,5794	0/0:32,0:32:55.74:0,56,3756	0/0:12,0:12:21.07:0,21,1703	0/0:25,0:23:30.09:0,30,2054	0/0:12,0:12:21.07:0,21,1734	0/0:26,0:25:50.20:0,50,3302	0/0:6,0:6:12.04:0,12,632	0/0:11,0:11:19.62:0,20,1192	0/0:24,0:24:39.13:0,39,2426	0/0:9,0:7:21.07:0,21,1218	0/0:26,0:25:57.20:0,57,4627	0/0:14,0:14:33.58:0,34,1944	1/1:0,4:4:9.03:734,9,0
chr10	96827847	.	G	GAA	63.76	PASS	AB=0.951;AC=7;AF=0.125;AN=56;BaseQRankSum=3.658;DP=503;FS=10.386;HRun=0;HaplotypeScore=115.8815;InbreedingCoeff=0.1668;MQ=51.97;MQ0=14;MQRankSum=-1.489;QD=0.67;ReadPosRankSum=0.454;VQSLOD=1.4293;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:38.94:0,39,197	0/1:9,1:10:25.64:26,0,126	0/0:12,0:1:3.01:0,3,48	0/0:12,0:7:17.42:0,17,251	0/0:15,0:14:30.51:0,31,206	0/0:15,0:15:1.06:0,1,195	0/0:17,0:17:26.41:0,26,228	1/1:11,0:9:18.57:111,19,0	0/1:20,0:20:8.87:9,0,230	0/0:20,0:19:20.58:0,21,289	0/1:9,2:11:33.84:34,0,64	0/0:17,0:17:50.06:0,50,323	0/0:15,0:14:22.24:0,22,230	0/0:17,1:18:13.49:0,13,262	0/0:16,0:16:20.48:0,20,269	0/0:37,0:37:46.14:0,46,201	0/0:30,0:30:25.02:0,25,422	0/0:14,0:14:15.62:0,16,264	0/0:17,2:17:13.89:0,14,218	0/1:12,0:12:0.34:0,0,177	0/0:32,1:31:49.71:0,50,497	0/0:15,0:15:19.83:0,20,222	0/0:9,1:10:12.53:0,13,121	0/0:23,0:22:30.03:0,30,347	0/0:17,1:16:31.36:0,31,208	0/1:31,0:30:3.58:4,0,328	0/0:14,0:14:30.89:0,31,186	0/0:6,0:5:8.52:0,9,41
chr10	96829347	.	ATTG	A	1057.49	PASS	AB=0.947;AC=33;AF=0.589;AN=56;BaseQRankSum=-4.109;DP=309;FS=4.703;HRun=0;HaplotypeScore=68.3761;InbreedingCoeff=-0.2183;MQ=69.34;MQ0=0;MQRankSum=3.409;QD=3.85;ReadPosRankSum=2.985;VQSLOD=0.7045;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:5.25:140,0,5	0/0:4,0:4:5.95:0,6,42	0/1:24,0:19:12.97:13,0,94	0/0:14,0:13:11.99:0,12,109	0/1:15,1:16:50.88:51,0,51	0/1:15,0:15:20.24:20,0,80	1/1:5,0:5:4.09:33,4,0	0/1:27,0:27:99:166,0,127	1/1:8,0:8:11.89:87,12,0	0/1:11,0:11:8.94:59,0,9	0/1:6,2:8:23.38:52,0,23	0/0:7,0:7:5.99:0,6,57	0/0:9,0:9:2.97:0,3,21	0/1:4,1:5:30.88:31,0,32	1/1:1,5:6:3:25,3,0	1/1:8,0:8:5.11:29,5,0	0/1:18,2:20:26.60:64,0,27	1/1:2,0:12:14.88:105,15,0	0/1:10,0:10:11.08:11,0,30	0/1:6,0:6:29.99:30,0,41	1/1:8,0:8:2.84:14,3,0	1/1:2,0:5:5.89:37,6,0	1/1:6,0:6:2.92:17,3,0	1/1:2,0:2:0.47:1,0,0	0/1:15,3:18:21.16:75,0,21	0/1:11,2:13:2.34:99,0,2	0/1:10,0:10:5.87:6,0,51	0/1:18,0:18:10.44:49,0,10
chr10	96829359	.	G	GTTATTA	3407.74	PASS	AB=0.890;AC=39;AF=0.696;AN=56;BaseQRankSum=0.793;DP=287;FS=7.803;HRun=0;HaplotypeScore=74.1013;InbreedingCoeff=0.2622;MQ=58.76;MQ0=2;MQRankSum=-3.691;QD=16.00;ReadPosRankSum=-0.758;VQSLOD=1.6534;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:77.24:77,0,540	1/1:2,1:3:2.48:96,2,0	0/0:19,0:13:36.10:0,36,676	0/0:11,0:9:21.07:0,21,468	1/1:4,11:16:21.23:351,21,0	1/1:4,12:17:11.87:339,12,0	0/1:4,0:4:1.63:18,0,2	0/0:26,0:24:9.39:0,9,547	1/1:7,0:7:11.69:143,12,0	1/1:7,1:8:13.61:245,14,0	0/1:4,3:7:3.76:93,0,4	1/1:0,4:7:5.98:116,6,0	0/1:1,4:8:23.78:90,0,24	1/1:3,1:4:2.59:93,3,0	0/0:5,0:5:0:0,0,0	0/1:8,0:8:37.56:38,0,222	1/1:7,13:21:10.77:231,11,0	0/0:13,0:13:21.02:0,21,312	1/1:5,5:11:15.02:308,15,0	1/1:5,0:5:8.80:109,9,0	0/1:8,0:8:22.24:81,0,22	1/1:4,0:4:2.03:6,2,0	1/1:6,0:6:11.89:95,12,0	1/1:4,0:4:6.02:93,6,0	1/1:4,10:17:5.19:170,5,0	1/1:9,1:10:18.43:230,18,0	1/1:7,3:10:16.84:349,17,0	0/1:13,0:13:35.43:35,0,114
chr10	96829362	.	G	GTTATTATTATTATTATTATTA	4568.68	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=1.386;DP=256;FS=2.786;HRun=0;HaplotypeScore=134.4763;InbreedingCoeff=0.4971;MQ=52.99;MQ0=2;MQRankSum=-2.104;QD=21.76;ReadPosRankSum=0.154;VQSLOD=3.4168;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:9.12:585,0,9	1/1:3,0:3:2.04:6,2,0	0/0:18,0:11:29.40:0,29,399	0/0:11,0:9:20.42:0,20,379	1/1:14,0:14:29.94:447,30,0	1/1:14,0:14:17.61:228,18,0	1/1:4,0:4:6.02:66,6,0	1/1:23,0:21:51.31:815,51,0	1/1:7,0:7:17.91:184,18,0	1/1:8,0:8:14.40:176,14,0	1/1:6,0:6:13.36:131,13,0	1/1:3,0:3:5.56:30,6,0	0/0:2,0:2:0.29:0,0,21	1/1:4,0:4:5.70:67,6,0	1/1:6,0:6:4.26:53,4,0	0/1:8,0:8:84.15:190,0,84	1/1:18,0:18:21.16:177,21,0	0/0:15,0:15:21.06:0,21,841	1/1:7,0:7:14.19:112,14,0	1/1:4,0:4:8.49:110,8,0	1/1:8,0:8:8.84:59,9,0	1/1:4,0:4:6.01:59,6,0	1/1:4,0:4:6.02:68,6,0	1/1:4,0:4:6.90:97,7,0	1/1:11,0:11:14.68:197,15,0	1/1:9,0:9:14.41:184,14,0	1/1:9,0:9:17.92:174,18,0	1/1:4,5:15:10.75:355,11,0
chr10	96830393	.	T	TAA	2500.89	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.465;DP=683;FS=1.872;HRun=0;HaplotypeScore=96.1328;InbreedingCoeff=0.9993;MQ=74.00;MQ0=2;MQRankSum=-9.994;QD=45.47;ReadPosRankSum=-0.661;VQSLOD=4.5217;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:33:95.48:1650,95,0	0/0:13,0:13:36.12:0,36,587	0/0:23,0:23:63.14:0,63,978	0/0:25,0:25:71.69:0,72,1048	0/0:19,0:19:57.19:0,57,930	0/0:28,0:27:81.28:0,81,1321	0/0:32,0:32:96.31:0,96,1541	0/0:42,0:42:99:0,126,2034	0/0:31,0:31:93.32:0,93,1517	0/0:24,0:24:66.23:0,66,1073	0/0:13,0:13:39.13:0,39,631	0/0:27,0:27:81.28:0,81,1318	0/0:26,0:26:78.27:0,78,1272	0/0:23,0:23:69.24:0,69,1116	0/0:30,0:30:84.29:0,84,1368	1/1:5,16:19:53.64:973,54,0	0/0:28,0:28:81.28:0,81,1322	0/0:15,0:15:45.15:0,45,733	0/0:33,0:33:99:0,99,1586	0/0:17,0:17:51.17:0,51,828	0/0:35,0:35:96.03:0,96,1540	0/0:20,0:20:60.20:0,60,979	0/0:12,0:12:36.11:0,36,563	0/0:31,0:31:93.32:0,93,1514	0/0:17,0:17:51.17:0,51,830	0/0:31,0:31:90.31:0,90,1468	0/0:24,0:24:72.23:0,72,1150	0/0:9,0:9:27.09:0,27,440
chr10	96830395	.	C	CAGTG	3975.72	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=11.119;DP=685;FS=1.880;HRun=0;HaplotypeScore=122.7245;InbreedingCoeff=0.9992;MQ=73.24;MQ0=2;MQRankSum=-10.948;QD=72.29;ReadPosRankSum=0.358;VQSLOD=5.6616;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,29:34:94.21:2501,94,0	0/0:13,0:13:36.10:0,36,661	0/0:24,0:24:72.24:0,72,1345	0/0:24,0:24:64.64:0,65,1302	0/0:20,0:20:60.19:0,60,1182	0/0:28,0:27:84.27:0,84,1705	0/0:32,0:32:96.32:0,96,1960	0/0:41,0:41:99:0,123,2528	0/0:31,0:31:93.30:0,93,1870	0/0:25,0:25:69.23:0,69,1403	0/0:12,0:12:36.12:0,36,754	0/0:28,0:28:81.24:0,81,1620	0/0:26,0:26:78.27:0,78,1634	0/0:23,0:23:69.24:0,69,1445	0/0:29,0:29:84.25:0,84,1630	1/1:4,16:18:54.19:1475,54,0	0/0:29,0:29:81.28:0,81,1698	0/0:17,0:17:48.14:0,48,966	0/0:31,0:31:90.31:0,90,1878	0/0:18,0:18:51.17:0,51,1068	0/0:36,0:36:99:0,100,1986	0/0:20,0:20:60.21:0,60,1245	0/0:11,0:11:33.11:0,33,678	0/0:32,0:32:93.30:0,93,1896	0/0:17,0:17:51.16:0,51,1031	0/0:30,0:30:87.30:0,87,1806	0/0:24,0:24:72.23:0,72,1455	0/0:9,0:9:27.06:0,27,488
chr10	96830977	.	AAGAC	A	451.15	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.223;DP=638;FS=0.000;HRun=0;HaplotypeScore=105.6580;InbreedingCoeff=0.9470;MQ=58.18;MQ0=5;MQRankSum=-1.125;QD=26.54;ReadPosRankSum=1.136;VQSLOD=3.5354;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,120,2908	0/0:7,0:7:18.06:0,18,444	0/0:26,0:19:41.81:0,42,943	0/0:30,0:23:54.19:0,54,1259	0/0:14,0:14:27.09:0,27,665	0/0:16,0:16:45.15:0,45,1109	0/0:28,0:28:60.21:0,60,1480	0/0:31,0:31:45.15:0,45,1109	0/0:24,1:25:13.23:0,13,1368	0/0:20,0:20:30.10:0,30,739	0/0:20,0:20:39.61:0,40,962	0/0:19,0:19:36.12:0,36,883	0/0:16,0:16:30.08:0,30,689	0/0:27,0:27:48.16:0,48,1178	0/0:30,0:30:54.17:0,54,1277	0/0:13,0:13:30.10:0,30,698	0/0:29,0:29:54.19:0,54,1303	1/1:7,10:17:33.11:546,33,0	0/0:28,0:26:51.16:0,51,1176	0/0:22,0:22:51.17:0,51,1194	0/0:36,0:36:78.27:0,78,1890	0/0:22,0:22:42.14:0,42,1011	0/0:17,0:17:36.12:0,36,879	0/0:49,1:50:40.30:0,40,2025	0/0:12,0:12:21.04:0,21,419	0/0:14,0:14:27.09:0,27,661	0/0:16,0:15:36.12:0,36,852	0/0:5,0:5:15.05:0,15,342
chr10	96831025	.	A	AACACACACACAC	4171.36	PASS	AB=0.934;AC=46;AF=0.852;AN=54;BaseQRankSum=-5.864;DP=589;FS=8.229;HRun=0;HaplotypeScore=186.0394;InbreedingCoeff=0.2497;MQ=48.80;MQ0=21;MQRankSum=-0.400;QD=7.78;ReadPosRankSum=-4.316;VQSLOD=0.1473;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:39:7.19:7,0,490	1/1:8,0:8:3.01:35,3,0	0/1:19,0:5:0:0,0,0	./.	1/1:13,7:23:0.47:1,0,0	1/1:16,0:16:2.93:25,3,0	1/1:33,0:28:12.01:151,12,0	0/1:20,0:26:1.04:34,0,1	1/1:21,0:20:14.95:137,15,0	1/1:12,0:12:15.04:191,15,0	1/1:11,0:13:5.60:61,6,0	1/1:18,0:18:18.38:254,18,0	1/1:6,5:12:3.90:176,4,0	1/1:21,0:20:11.94:152,12,0	1/1:11,10:25:1.16:172,1,0	0/0:11,0:12:2.09:0,2,258	1/1:16,8:35:8.50:319,8,0	0/1:13,0:24:34.56:35,0,363	1/1:15,7:23:40.16:1112,40,0	1/1:18,0:18:6.01:96,6,0	1/1:44,0:43:29.77:343,30,0	1/1:18,0:19:15.52:262,16,0	1/1:9,2:11:1.52:52,2,0	1/1:22,4:28:3:62,3,0	1/1:6,4:12:3.01:85,3,0	1/1:18,0:18:21.01:296,21,0	1/1:11,0:10:6.02:114,6,0	0/0:3,0:14:24.20:0,24,634
chr10	96831849	.	TA	T	2463.75	PASS	AB=0.749;AC=41;AF=0.732;AN=56;BaseQRankSum=1.190;DP=508;FS=1.364;HRun=17;HaplotypeScore=64.8557;InbreedingCoeff=-0.1325;MQ=60.97;MQ0=10;MQRankSum=1.764;QD=4.96;ReadPosRankSum=3.216;VQSLOD=1.6707;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,21:38:42.11:329,42,0	1/1:5,2:7:5.76:33,6,0	0/1:20,0:10:4.37:4,0,37	0/1:14,0:6:10.58:11,0,16	0/1:16,3:25:44.75:45,0,51	1/1:6,10:17:10.25:117,10,0	0/1:12,6:18:57.92:84,0,58	1/1:13,15:29:29.69:158,30,0	1/1:7,7:14:17.32:100,17,0	1/1:9,8:17:24.88:132,25,0	0/1:11,15:28:4.06:146,0,4	0/1:10,6:16:20.57:41,0,21	0/0:8,1:10:6.80:0,7,124	1/1:7,6:14:16.41:86,16,0	0/1:7,8:17:44.20:67,0,44	0/1:6,5:13:5.35:56,0,5	0/1:9,11:22:4.61:138,0,5	1/1:7,1:28:11.29:80,11,0	1/1:8,11:18:31.72:175,32,0	0/1:5,6:11:30.11:30,0,41	1/1:2,9:11:14.48:83,14,0	0/1:3,2:5:15.21:23,0,15	0/1:13,3:18:1.77:76,0,2	1/1:6,13:19:45.84:255,46,0	1/1:4,6:11:7.75:39,8,0	0/1:20,2:22:24.65:62,0,25	1/1:12,12:23:24.08:147,24,0	1/1:4,8:12:17.38:100,17,0
chr10	96833289	.	G	GAAA	6160.36	PASS	AB=0.696;AC=46;AF=0.821;AN=56;BaseQRankSum=-2.089;DP=532;FS=2.038;HRun=14;HaplotypeScore=93.3656;InbreedingCoeff=-0.0092;MQ=77.14;MQ0=2;MQRankSum=0.294;QD=11.78;ReadPosRankSum=-2.448;VQSLOD=2.1509;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,1:32:35.91:249,36,0	1/1:8,0:8:18.03:222,18,0	0/1:16,0:14:17.33:17,0,24	0/1:12,0:13:5.45:5,0,22	1/1:2,8:17:40.51:375,41,0	1/1:2,8:12:10.26:130,10,0	0/1:7,6:18:3.85:237,0,4	0/1:11,0:25:34.47:115,0,34	1/1:7,9:20:20.98:235,21,0	1/1:9,9:21:40.49:444,40,0	1/1:8,2:12:27.91:289,28,0	1/1:4,9:15:15.38:314,15,0	1/1:9,2:13:25.22:297,25,0	0/1:6,9:16:18.81:88,0,19	1/1:4,11:17:18.02:280,18,0	1/1:3,0:17:14.47:109,14,0	0/1:12,16:34:21.87:177,0,22	0/1:8,0:28:37.19:37,0,70	1/1:11,0:21:33.95:367,34,0	1/1:6,1:24:52.93:548,53,0	1/1:8,0:27:10.15:56,10,0	1/1:3,6:15:24.81:257,25,0	1/1:7,7:16:11.98:138,12,0	0/1:6,12:21:11.64:184,0,12	1/1:6,6:13:15.61:166,16,0	1/1:4,20:28:53.94:632,54,0	1/1:3,15:21:17.02:192,17,0	0/0:5,0:9:1.53:0,2,28
chr10	96833727	.	G	GT	23059.55	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.575;DP=691;FS=9.667;HRun=4;HaplotypeScore=61.1679;InbreedingCoeff=0.9948;MQ=71.41;MQ0=0;MQRankSum=-9.089;QD=35.64;ReadPosRankSum=5.090;VQSLOD=4.7364;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,42:47:99:1632,123,0	1/1:1,7:8:18.06:246,18,0	0/0:23,0:23:54.11:0,54,586	0/0:21,0:21:44.97:0,45,471	1/1:1,19:20:54.18:738,54,0	1/1:0,23:23:69.23:942,69,0	1/1:3,26:29:72.24:985,72,0	1/1:1,31:32:93.31:1270,93,0	1/1:2,30:32:84.28:1149,84,0	1/1:0,26:26:78.26:1065,78,0	1/1:2,14:16:39.09:512,39,0	1/1:1,26:27:72.24:985,72,0	1/1:0,27:27:78.26:1067,78,0	1/1:2,14:16:45.06:592,45,0	1/1:2,33:35:90.30:1231,90,0	1/1:1,27:28:69.23:944,69,0	1/1:1,22:23:60.20:821,60,0	1/1:0,23:23:69.23:944,69,0	1/1:2,20:22:57.19:778,57,0	1/1:2,31:33:87.25:1170,87,0	1/1:2,25:27:60.20:821,60,0	1/1:3,23:26:54.09:697,54,0	1/1:2,10:12:24.08:328,24,0	1/1:1,26:27:75.25:1025,75,0	1/1:2,15:17:45.15:616,45,0	1/1:3,26:29:78.26:1065,78,0	1/1:4,23:27:60.20:821,60,0	1/1:0,15:15:45.15:616,45,0
chr10	96833884	.	TA	T	8786.09	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=10.491;DP=557;FS=4.791;HRun=9;HaplotypeScore=60.4998;InbreedingCoeff=0.9513;MQ=80.09;MQ0=1;MQRankSum=-1.660;QD=21.22;ReadPosRankSum=4.299;VQSLOD=5.5856;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.25:0,90,1027	1/1:3,9:12:27.01:247,27,0	0/0:22,0:21:38.02:0,38,423	0/0:13,0:11:4.70:0,5,126	1/1:5,14:19:39.01:357,39,0	1/1:3,17:20:48.02:439,48,0	1/1:2,22:24:60.03:549,60,0	0/0:25,0:25:66.16:0,66,729	1/1:1,15:16:36.02:329,36,0	1/1:2,18:20:54.02:490,54,0	1/1:2,22:24:62.95:565,63,0	1/1:4,16:20:48.02:439,48,0	1/1:4,12:16:30:274,30,0	1/1:3,15:18:36.02:329,36,0	1/1:2,18:20:42.02:384,42,0	0/0:22,0:22:60.16:0,60,682	1/1:3,17:20:39.02:357,39,0	0/0:15,0:15:45.12:0,45,508	1/1:3,6:9:4.71:149,5,0	1/1:4,25:29:75:679,75,0	1/1:0,11:11:30.02:275,30,0	1/1:4,18:22:50.96:458,51,0	1/1:0,26:26:60.02:549,60,0	1/1:1,17:18:42.02:384,42,0	1/1:2,19:21:51.03:467,51,0	1/1:3,17:20:51:460,51,0	1/1:3,26:29:66.03:604,66,0	0/0:12,0:12:33.10:0,33,381
chr10	96834865	.	CTGTG	C	1081.18	PASS	AB=0.937;AC=40;AF=0.800;AN=50;BaseQRankSum=1.174;DP=620;FS=0.000;HRun=0;HaplotypeScore=136.5321;InbreedingCoeff=0.2026;MQ=55.82;MQ0=32;MQRankSum=-1.751;QD=2.45;ReadPosRankSum=-0.789;VQSLOD=1.6249;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,21:56:0:0,0,0	1/1:4,0:3:3:28,3,0	./.	0/0:34,0:21:0:0,0,0	0/0:21,0:21:0:0,0,0	1/1:27,0:27:6.01:56,6,0	0/1:28,0:27:5.31:64,0,5	0/1:23,0:22:0:0,0,0	1/1:27,0:27:5.89:52,6,0	0/1:17,0:17:0:0,0,0	1/1:12,0:12:6.01:56,6,0	1/1:23,0:23:14.96:129,15,0	1/1:10,0:10:5.94:42,6,0	1/1:11,0:15:11.79:77,12,0	1/1:11,0:11:2.94:18,3,0	1/1:6,7:14:9.03:140,9,0	1/1:23,0:22:5.97:48,6,0	1/1:21,0:19:11.98:98,12,0	1/1:24,0:24:5.37:33,5,0	1/1:15,0:15:3:28,3,0	0/1:48,0:41:5.79:6,0,6	1/1:20,0:17:5.98:46,6,0	1/1:11,0:11:5.95:43,6,0	./.	./.	1/1:26,0:24:5.66:70,6,0	1/1:13,0:13:8.86:72,9,0	1/1:10,0:9:8.85:61,9,0
chr10	96834897	.	GTGTGTGTGTGTGTC	G	4843.33	PASS	AB=0.785;AC=36;AF=0.692;AN=52;BaseQRankSum=-1.074;DP=634;FS=2.717;HRun=0;HaplotypeScore=162.2720;InbreedingCoeff=0.4240;MQ=50.47;MQ0=41;MQRankSum=3.165;QD=10.46;ReadPosRankSum=2.209;VQSLOD=3.9091;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:55:58.98:0,59,1008	1/1:7,0:5:12:187,12,0	0/0:5,0:2:5.95:0,6,59	0/0:12,0:4:8.53:0,9,66	0/1:2,12:14:0:0,0,0	1/1:4,20:24:5.76:251,6,0	0/1:37,0:24:23.06:450,0,23	0/0:25,0:24:10.13:0,10,184	1/1:5,24:29:4.43:157,4,0	1/1:15,0:14:29.56:233,30,0	0/1:5,8:13:16.13:242,0,16	1/1:6,17:23:14.01:513,14,0	1/1:2,6:8:2.87:221,3,0	1/1:20,0:18:29.97:419,30,0	1/1:18,1:17:6.02:285,6,0	0/0:19,0:19:30.05:0,30,691	0/1:5,21:25:3.94:142,0,4	0/1:27,0:25:1.45:1,0,214	1/1:5,8:13:23.62:253,24,0	1/1:2,12:13:3.01:126,3,0	1/1:74,0:65:6.25:96,6,0	1/1:8,14:19:8.66:62,9,0	1/1:19,0:15:25.47:212,25,0	./.	./.	1/1:10,24:30:57.59:787,58,0	1/1:5,8:13:7.97:200,8,0	0/1:11,0:8:6.50:6,0,169
chr10	96834899	.	GTGTGTGTGTGTC	G	3767.26	PASS	AB=1.000;AC=39;AF=0.750;AN=52;BaseQRankSum=-1.048;DP=612;FS=0.614;HRun=0;HaplotypeScore=148.8039;InbreedingCoeff=0.3257;MQ=50.59;MQ0=40;MQRankSum=2.845;QD=8.02;ReadPosRankSum=2.248;VQSLOD=2.6084;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:56:65.30:0,65,884	1/1:8,0:5:11.87:146,12,0	0/0:4,0:2:3.01:0,3,41	0/0:11,0:4:3.01:0,3,40	0/1:13,0:13:0:0,0,0	1/1:22,0:22:5.76:184,6,0	1/1:36,0:24:3.51:311,4,0	0/1:25,0:24:9.48:9,0,184	1/1:28,0:28:4.49:134,4,0	1/1:7,8:14:23.59:196,24,0	0/1:12,0:12:16:175,0,16	1/1:23,0:23:14.01:409,14,0	1/1:8,0:8:7.53:167,8,0	1/1:18,0:17:29.95:285,30,0	1/1:19,0:17:18.02:217,18,0	0/0:18,0:18:30.05:0,30,557	1/1:24,0:24:5.96:132,6,0	0/1:27,0:25:27.56:28,0,40	1/1:13,0:13:23.66:207,24,0	1/1:13,0:12:3.01:92,3,0	1/1:25,45:62:2.11:29,2,0	1/1:20,0:18:8.87:95,9,0	1/1:17,0:14:26.79:229,27,0	./.	./.	1/1:31,0:28:53.63:513,54,0	1/1:11,0:11:8.15:184,8,0	0/1:10,0:7:24.04:24,0,95
chr10	96834905	.	GTGTGTC	G	2518.66	PASS	AB=0.946;AC=34;AF=0.654;AN=52;BaseQRankSum=-1.754;DP=591;FS=16.607;HRun=0;HaplotypeScore=120.6082;InbreedingCoeff=0.2733;MQ=51.44;MQ0=34;MQRankSum=2.001;QD=6.05;ReadPosRankSum=2.398;VQSLOD=1.5188;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:60:76.41:0,76,619	1/1:10,0:7:17.85:151,18,0	0/0:4,0:3:2.18:0,2,53	0/1:5,0:3:15.98:45,0,16	0/1:13,0:13:0:0,0,0	1/1:22,0:22:5.76:101,6,0	1/1:29,0:17:29.20:255,29,0	0/0:29,0:28:46.52:0,47,369	0/1:28,0:28:3.72:44,0,4	1/1:12,0:11:20.95:168,21,0	0/1:12,0:12:15.97:92,0,16	1/1:23,0:23:0.99:187,1,0	1/1:8,0:8:5.60:79,6,0	1/1:19,0:17:35.93:306,36,0	1/1:16,0:14:26.96:226,27,0	0/0:23,0:23:41.98:0,42,306	0/1:24,0:23:6.38:45,0,6	0/1:6,20:24:9.06:93,0,9	1/1:13,0:13:16.43:158,16,0	1/1:13,0:12:3.01:50,3,0	1/1:65,0:57:2.78:23,3,0	0/1:21,0:18:7.93:8,0,11	1/1:15,0:12:4.68:129,5,0	./.	./.	1/1:31,0:27:56.77:481,57,0	0/1:11,0:11:10.67:42,0,11	0/0:8,0:5:11.30:0,11,81
chr10	96835665	.	TTATA	T	288.27	PASS	AB=0.929;AC=8;AF=0.211;AN=38;BaseQRankSum=2.094;DP=181;FS=1.344;HRun=0;HaplotypeScore=38.1140;InbreedingCoeff=0.3446;MQ=100.60;MQ0=4;MQRankSum=0.241;QD=4.58;ReadPosRankSum=1.891;VQSLOD=0.8262;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,3:9:6.02:96,6,0	0/0:1,0:1:3.01:0,3,36	./.	0/1:33,0:23:0.38:1,0,0	0/0:5,0:6:3.01:0,3,53	0/0:4,0:4:3.01:0,3,72	./.	0/0:22,0:25:26.67:0,27,491	0/0:3,0:3:6.02:0,6,144	0/0:4,0:4:3.01:0,3,48	./.	0/0:3,0:3:9.03:0,9,217	0/0:2,0:2:3.01:0,3,72	./.	./.	1/1:4,2:7:12.03:172,12,0	1/1:4,4:8:6.02:96,6,0	0/0:6,0:14:15.04:0,15,255	0/0:6,0:6:3.01:0,3,46	0/0:5,0:5:3.01:0,3,45	./.	./.	./.	./.	0/0:3,0:4:5.75:0,6,73	0/0:4,0:4:3:0,3,26	0/1:5,1:6:36.12:36,0,155	0/0:4,0:6:15.05:0,15,231
chr10	96836019	.	AAC	A	1451.93	PASS	AB=0.913;AC=9;AF=0.161;AN=56;BaseQRankSum=4.663;DP=755;FS=1.093;HRun=0;HaplotypeScore=108.9366;InbreedingCoeff=0.3259;MQ=62.03;MQ0=12;MQRankSum=0.694;QD=10.15;ReadPosRankSum=0.099;VQSLOD=3.2857;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,29:36:81.25:1004,81,0	0/1:10,1:11:7.11:7,0,381	0/0:42,0:18:21.04:0,21,302	0/0:37,0:11:15.03:0,15,183	0/0:7,0:7:21.07:0,21,339	0/0:21,0:21:51.16:0,51,809	0/0:36,0:36:93.28:0,93,1463	0/0:7,0:23:40.67:0,41,341	0/0:30,0:30:78.22:0,78,1194	0/1:14,2:16:19.70:20,0,548	0/0:8,0:8:18.06:0,18,295	0/0:37,0:37:99:0,99,1538	0/1:24,3:27:11.17:11,0,846	0/0:31,1:32:50.08:0,50,1284	0/0:23,0:23:63.20:0,63,995	1/1:2,17:19:38.95:460,39,0	0/0:29,0:29:69.24:0,69,1118	0/0:7,0:21:45.01:0,45,428	0/0:15,0:18:36.92:0,37,548	0/0:7,0:7:21.07:0,21,344	0/0:113,1:114:99:0,255,4569	0/0:14,1:15:1.93:0,2,523	0/0:11,0:11:21.07:0,21,344	0/0:63,1:64:99:0,137,2634	0/1:9,0:9:12.26:12,0,291	0/1:20,4:24:85.60:86,0,725	0/0:19,0:18:54.10:0,54,849	0/0:3,0:18:42.01:0,42,394
chr10	96837260	.	AGG	A	7396.78	PASS	AB=0.787;AC=46;AF=0.821;AN=56;BaseQRankSum=-8.122;DP=537;FS=7.557;HRun=11;HaplotypeScore=75.1117;InbreedingCoeff=0.7450;MQ=76.20;MQ0=21;MQRankSum=-2.835;QD=15.84;ReadPosRankSum=3.112;VQSLOD=3.3398;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,21:30:35.81:362,36,0	0/1:2,0:6:9.23:12,0,9	0/0:30,0:18:20.19:0,20,196	0/1:36,0:26:5.17:5,0,244	0/0:5,0:17:16.77:0,17,59	1/1:9,12:21:22.86:308,23,0	1/1:6,17:23:27.04:288,27,0	1/1:4,1:11:21.24:115,21,0	1/1:3,13:16:24.04:252,24,0	1/1:9,9:18:36.07:376,36,0	1/1:7,15:20:39.04:400,39,0	1/1:4,8:11:18.04:191,18,0	1/1:1,19:20:45.09:469,45,0	1/1:5,14:17:33.07:351,33,0	0/0:9,0:15:24.11:0,24,204	1/1:1,17:18:48.12:511,48,0	1/1:6,21:27:54.12:573,54,0	1/1:8,21:24:8.14:410,8,0	1/1:2,12:15:38.66:373,39,0	1/1:7,13:19:39.05:402,39,0	1/1:3,11:13:23.38:254,23,0	0/0:4,0:6:4.73:0,5,17	1/1:7,12:18:24.04:255,24,0	1/1:3,12:15:30.07:319,30,0	1/1:7,14:20:27.01:273,27,0	1/1:5,11:15:33.04:336,33,0	1/1:5,19:22:48.09:500,48,0	1/1:1,0:11:13.72:60,14,0
chr10	96837270	.	GGT	G	1610.10	PASS	AB=0.973;AC=30;AF=0.536;AN=56;BaseQRankSum=3.611;DP=508;FS=9.205;HRun=0;HaplotypeScore=88.1920;InbreedingCoeff=0.1333;MQ=65.68;MQ0=24;MQRankSum=2.513;QD=4.19;ReadPosRankSum=9.242;VQSLOD=0.0427;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:29:74.16:98,0,74	0/0:5,0:5:4.24:0,4,30	0/0:19,0:10:12.50:0,13,196	0/0:26,0:16:0.43:0,0,269	0/0:19,0:19:30.97:0,31,176	1/1:18,1:18:2.92:84,3,0	1/1:20,0:20:5.02:60,5,0	0/0:17,0:17:35.19:0,35,240	1/1:16,0:16:3.75:61,4,0	0/1:16,1:16:60.96:70,0,61	1/1:18,0:16:32.71:158,33,0	0/1:12,1:12:23.27:64,0,23	1/1:19,0:19:33.46:132,33,0	0/1:20,0:18:40.73:41,0,42	0/0:16,0:15:32.15:0,32,316	1/1:18,0:17:35.20:134,35,0	0/1:31,0:30:51.76:124,0,52	0/1:28,0:22:51.37:97,0,51	0/1:16,0:15:33.04:35,0,33	1/1:15,1:15:13.87:147,14,0	1/1:13,0:11:16.80:58,17,0	0/0:6,0:5:5.55:0,6,32	0/1:14,0:13:2.55:55,0,3	1/1:13,1:14:7.21:86,7,0	1/1:18,0:17:3.29:62,3,0	0/1:15,2:16:39.71:90,0,40	0/1:25,1:24:22.26:132,0,22	0/0:16,0:14:21.76:0,22,105
chr10	96837342	.	G	GA	686.01	PASS	AB=0.938;AC=5;AF=0.089;AN=56;BaseQRankSum=-0.278;DP=488;FS=8.058;HRun=7;HaplotypeScore=64.5615;InbreedingCoeff=0.7061;MQ=53.21;MQ0=22;MQRankSum=0.208;QD=10.24;ReadPosRankSum=-0.749;VQSLOD=1.1949;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,10:31:47.80:493,48,0	0/0:2,0:2:3:0,3,27	0/0:15,0:3:2.97:0,3,24	0/1:13,1:4:1.17:5,0,1	0/0:22,0:21:38.64:0,39,351	0/0:20,0:18:42.06:0,42,404	0/0:14,0:14:21.02:0,21,200	0/0:15,0:15:23.80:0,24,210	0/0:14,0:14:20.99:0,21,191	0/0:8,0:8:9:0,9,83	0/0:14,1:14:17.96:0,18,171	0/0:19,0:18:39:0,39,360	0/0:13,0:13:20.80:0,21,201	0/0:20,0:19:35.82:0,36,325	0/0:16,0:15:33.02:0,33,310	1/1:10,9:18:27.06:312,27,0	0/0:42,0:39:74.93:0,75,679	0/0:25,0:22:36.27:0,36,385	0/0:20,0:20:29.98:0,30,280	0/0:10,0:10:17.34:0,17,129	0/0:11,0:10:21.03:0,21,201	0/0:10,0:8:12.01:0,12,115	0/0:12,0:11:11.92:0,12,115	0/0:24,1:23:28.39:0,28,397	0/0:10,0:8:5.91:0,6,100	0/0:18,0:18:32.96:0,33,305	0/0:22,0:22:44.96:0,45,409	0/0:21,0:17:23.83:0,24,228
chr10	96837711	.	AGGAACCCT	A	33603.60	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=11.802;DP=611;FS=2.916;HRun=0;HaplotypeScore=187.6317;InbreedingCoeff=0.9872;MQ=71.27;MQ0=0;MQRankSum=-15.125;QD=66.94;ReadPosRankSum=6.939;VQSLOD=4.8650;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:69.24:1829,69,0	1/1:0,7:7:18.06:468,18,0	0/0:22,0:22:62.55:0,63,2412	0/0:16,0:16:45.15:0,45,1636	1/1:3,21:23:42.14:1151,42,0	1/1:2,20:22:48.16:1359,48,0	1/1:2,16:18:39.13:1119,39,0	0/0:29,0:29:87.29:0,87,3486	1/1:3,21:24:60.21:1721,60,0	1/1:0,36:36:99:2729,105,0	1/1:0,15:15:33.11:906,33,0	1/1:0,26:26:78.27:2200,78,0	1/1:2,17:19:54.19:1549,54,0	1/1:0,23:23:60.21:1718,60,0	1/1:2,32:34:93.28:2563,93,0	1/1:1,26:27:72:2065,72,0	1/1:1,23:24:57.20:1587,57,0	0/0:23,0:23:69.24:0,69,2916	1/1:5,13:18:42.14:1202,42,0	1/1:2,18:20:48.16:1280,48,0	1/1:2,10:12:18.06:474,18,0	1/1:1,26:27:72.25:2062,72,0	1/1:1,16:16:36.12:997,36,0	1/1:5,9:14:12.04:343,12,0	1/1:0,10:9:18.06:516,18,0	1/1:3,18:21:54.11:1360,54,0	1/1:2,29:31:84.29:2407,84,0	0/0:19,0:19:57.20:0,57,2476
chr10	96838136	.	GCC	G	807.85	PASS	AB=0.923;AC=8;AF=0.154;AN=52;BaseQRankSum=-1.083;DP=332;FS=17.043;HRun=12;HaplotypeScore=50.7238;InbreedingCoeff=0.3842;MQ=79.35;MQ0=0;MQRankSum=0.003;QD=7.77;ReadPosRankSum=5.608;VQSLOD=-0.3763;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,18:33:44.97:449,45,0	./.	0/0:12,0:12:16.76:0,17,209	0/1:12,0:12:9.97:10,0,143	0/0:7,0:7:6:0,6,68	0/0:12,0:16:12.02:0,12,140	0/0:12,0:16:18.48:0,18,185	0/1:10,0:10:0.01:0,0,0	0/0:5,0:5:7.83:0,8,68	0/0:4,0:4:3.01:0,3,39	./.	0/0:14,0:14:12.02:0,12,171	0/0:3,0:7:3:0,3,29	0/0:11,0:11:15.04:0,15,182	0/0:17,0:17:18.15:0,18,194	1/1:3,15:18:14.72:394,15,0	0/0:17,0:17:21.02:0,21,217	0/1:11,0:16:80.41:80,0,129	0/0:11,0:11:9.03:0,9,127	0/0:6,0:6:3.01:0,3,33	0/0:13,0:20:10.54:0,11,79	0/0:10,0:15:9:0,9,78	0/0:10,0:11:12.92:0,13,141	0/0:5,0:15:6:0,6,58	0/0:6,0:6:8.99:0,9,96	0/0:3,0:8:5.73:0,6,53	0/1:8,0:14:0:0,0,0	0/0:6,0:7:11.09:0,11,120
chr10	96838284	.	AAG	A	894.76	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.854;DP=610;FS=10.230;HRun=0;HaplotypeScore=72.8633;InbreedingCoeff=0.9008;MQ=81.55;MQ0=0;MQRankSum=-0.230;QD=29.83;ReadPosRankSum=2.002;VQSLOD=5.2133;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,151,2614	0/0:13,0:13:36.12:0,36,633	0/0:21,0:21:57.66:0,58,967	0/0:28,0:26:69.24:0,69,1189	0/0:16,0:16:48.16:0,48,836	0/0:17,0:17:51.15:0,51,843	0/0:28,0:28:78.25:0,78,1354	0/0:29,0:29:81.28:0,81,1370	0/0:26,0:26:78.25:0,78,1341	0/0:26,0:26:69.24:0,69,1219	0/0:10,0:10:27.09:0,27,478	0/0:18,0:18:51.15:0,51,849	0/0:14,0:14:36.12:0,36,639	0/0:33,0:33:93.30:0,93,1604	0/0:19,0:19:54.18:0,54,927	0/0:15,0:15:39.13:0,39,678	0/0:33,0:33:90.31:0,90,1566	1/1:1,29:30:72.24:990,72,0	0/0:26,0:26:75.26:0,75,1300	0/0:14,0:14:39.13:0,39,691	0/0:32,0:32:84.29:0,84,1479	0/0:19,0:19:54.17:0,54,929	0/0:11,0:11:21.07:0,21,353	0/0:28,0:28:72.24:0,72,1232	0/0:13,0:13:36.11:0,36,595	0/0:18,0:18:48.16:0,48,840	0/0:20,0:20:60.20:0,60,1049	0/0:2,0:2:6.02:0,6,106
chr10	96838839	.	CTTG	C	17356.35	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.432;DP=502;FS=2.644;HRun=0;HaplotypeScore=90.0064;InbreedingCoeff=0.9587;MQ=77.11;MQ0=0;MQRankSum=-8.495;QD=36.54;ReadPosRankSum=4.924;VQSLOD=5.6606;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,42:43:63.68:1012,64,0	1/1:0,8:8:24.08:400,24,0	0/0:15,0:15:45.03:0,45,806	0/0:12,0:12:29.31:0,29,498	1/1:0,17:17:27.88:495,28,0	1/1:3,19:22:54.18:898,54,0	1/1:1,20:21:54.18:898,54,0	1/1:4,20:24:57.18:921,57,0	1/1:1,17:18:45.15:749,45,0	1/1:2,19:21:54.13:833,54,0	1/1:1,6:8:12.04:200,12,0	1/1:0,22:22:48.16:799,48,0	1/1:1,16:17:42.14:699,42,0	1/1:1,15:16:36.12:586,36,0	1/1:1,16:17:45.15:749,45,0	1/1:2,16:18:39.13:649,39,0	1/1:3,34:37:90.31:1498,90,0	1/1:0,27:27:69.24:1149,69,0	1/1:6,20:26:60.14:922,60,0	1/1:2,10:12:23.61:386,24,0	1/1:2,17:19:39.13:649,39,0	1/1:0,11:11:30.10:498,30,0	1/1:1,10:11:11.91:199,12,0	1/1:2,15:17:24.08:400,24,0	1/1:0,12:12:24.08:400,24,0	1/1:0,8:8:24.06:371,24,0	1/1:0,17:17:41.54:698,42,0	1/1:0,6:6:18.06:299,18,0
chr10	96839277	.	AAAATAAATAAAT	A	2405.70	PASS	AB=1.000;AC=27;AF=0.750;AN=36;BaseQRankSum=2.079;DP=282;FS=2.050;HRun=0;HaplotypeScore=97.1521;InbreedingCoeff=0.5395;MQ=70.20;MQ0=1;MQRankSum=-2.373;QD=14.23;ReadPosRankSum=-1.363;VQSLOD=1.9627;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:9.03:0,9,320	1/1:3,0:3:3.01:37,3,0	./.	./.	1/1:5,4:9:5.93:40,6,0	1/1:8,11:19:17.98:418,18,0	./.	0/1:35,0:34:1.61:2,0,221	1/1:7,0:7:3.01:54,3,0	./.	1/1:7,3:10:5.98:122,6,0	1/1:5,3:8:3.01:102,3,0	1/1:1,3:4:6.02:205,6,0	1/1:4,1:5:3.01:96,3,0	./.	0/0:10,0:14:24.08:0,24,1130	1/1:12,9:21:5.89:204,6,0	0/0:29,0:30:43.02:0,43,1580	1/1:11,9:20:27.07:591,27,0	./.	./.	./.	1/1:6,0:6:3.01:54,3,0	./.	1/1:5,5:10:12.04:409,12,0	1/1:10,2:12:6.02:205,6,0	./.	0/0:6,0:6:6.02:0,6,73
chr10	96839645	.	C	CAACAACAACAACAACA	18531.54	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=-3.331;DP=551;FS=4.178;HRun=0;HaplotypeScore=199.5408;InbreedingCoeff=0.4358;MQ=50.20;MQ0=20;MQRankSum=-2.803;QD=36.99;ReadPosRankSum=1.051;VQSLOD=4.1062;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:18:17.96:398,18,0	0/1:9,0:9:30.20:324,0,30	0/0:35,0:6:4.28:0,4,16	0/0:15,0:6:14.98:0,15,149	1/1:30,0:28:34.24:868,34,0	1/1:21,0:20:18.25:361,18,0	1/1:0,0:18:3.01:214,3,0	1/1:32,0:32:63.83:2195,64,0	1/1:18,0:17:21.76:604,22,0	1/1:16,0:16:37.17:1222,37,0	1/1:3,1:21:22.54:480,23,0	1/1:17,0:16:28.98:575,29,0	1/1:22,0:22:30.85:1179,31,0	1/1:0,0:12:3.01:199,3,0	1/1:19,0:19:24.74:614,25,0	1/1:26,0:24:60.08:1424,60,0	1/1:21,0:21:32.19:624,32,0	0/1:14,0:13:12.16:255,0,12	1/1:19,0:18:33.65:911,34,0	1/1:19,0:18:23.90:865,24,0	1/1:3,0:3:6.23:200,6,0	1/1:12,0:11:14.95:477,15,0	1/1:19,0:19:17.82:959,18,0	1/1:15,0:14:27.40:573,27,0	1/1:20,0:18:12.36:259,12,0	1/1:28,0:25:47.94:1390,48,0	1/1:31,0:29:40.21:964,40,0	1/1:7,4:20:11.28:397,11,0
chr10	96840267	.	GA	G	629.91	PASS	AB=0.900;AC=3;AF=0.054;AN=56;BaseQRankSum=6.093;DP=349;FS=2.805;HRun=8;HaplotypeScore=33.3210;InbreedingCoeff=0.6394;MQ=76.10;MQ0=1;MQRankSum=-0.015;QD=15.75;ReadPosRankSum=0.971;VQSLOD=2.8758;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.22:0,75,893	0/0:2,0:2:6.02:0,6,72	0/0:7,0:7:16.28:0,16,173	0/0:11,0:10:18.82:0,19,178	0/0:18,0:18:48.08:0,48,538	0/0:21,0:21:57.17:0,57,688	0/1:8,1:9:1.91:2,0,251	0/0:30,0:30:63.16:0,63,730	0/0:6,0:6:18.06:0,18,217	0/0:15,0:15:36.10:0,36,427	0/0:13,0:13:36.09:0,36,412	0/0:7,0:7:21.05:0,21,242	0/0:8,0:8:23.99:0,24,260	0/0:8,0:8:24.07:0,24,290	0/0:8,0:8:24.06:0,24,280	0/0:9,0:9:27.08:0,27,326	0/0:17,0:17:45.14:0,45,544	1/1:2,29:31:75.12:724,75,0	0/0:16,0:16:42.12:0,42,497	0/0:11,0:11:33.10:0,33,399	0/0:9,0:9:27.08:0,27,326	0/0:4,0:4:12.04:0,12,145	0/0:6,0:6:15.05:0,15,181	0/0:4,0:4:12.04:0,12,145	0/0:12,0:12:30.08:0,30,352	0/0:17,0:17:45.13:0,45,534	0/0:12,0:12:30.08:0,30,350	0/0:11,0:11:30.09:0,30,362
chr10	96840489	.	GGTGTGT	G	4323.92	PASS	AB=0.795;AC=42;AF=0.875;AN=48;BaseQRankSum=2.543;DP=566;FS=0.000;HRun=0;HaplotypeScore=120.2761;InbreedingCoeff=0.2472;MQ=69.99;MQ0=11;MQRankSum=-3.442;QD=10.34;ReadPosRankSum=-0.504;VQSLOD=3.3818;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,2:29:48.04:108,0,48	1/1:6,3:9:6.28:122,6,0	./.	./.	1/1:8,3:12:9.03:164,9,0	1/1:13,1:14:6:86,6,0	1/1:21,6:27:8.56:182,9,0	1/1:21,0:20:0.63:55,1,0	0/1:9,8:17:46.60:345,0,47	1/1:11,2:13:5.95:122,6,0	1/1:6,6:12:9.03:183,9,0	1/1:19,8:28:23.29:415,23,0	1/1:12,6:18:15.05:286,15,0	1/1:13,7:20:15.05:286,15,0	1/1:12,14:28:27.98:532,28,0	1/1:9,0:15:3.54:7,4,0	1/1:22,11:33:7.65:140,8,0	0/0:21,0:30:33.11:0,33,891	./.	1/1:6,2:8:6.02:122,6,0	./.	1/1:7,5:12:12.04:244,12,0	1/1:8,2:9:3.01:61,3,0	1/1:17,11:29:6.18:123,6,0	1/1:5,7:12:3.01:61,3,0	1/1:15,6:21:21.67:371,22,0	1/1:14,12:26:15.94:307,16,0	0/0:7,0:6:2.22:0,2,7
chr10	96842049	.	CT	C	329.11	PASS	AB=0.882;AC=4;AF=0.071;AN=56;BaseQRankSum=4.473;DP=548;FS=3.791;HRun=10;HaplotypeScore=56.7517;InbreedingCoeff=0.4476;MQ=81.26;MQ0=0;MQRankSum=-2.227;QD=5.88;ReadPosRankSum=0.856;VQSLOD=1.0873;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:25:57.15:0,57,630	0/0:10,0:10:30.06:0,30,320	0/0:14,1:15:5.01:0,5,250	0/1:16,3:19:15.21:15,0,226	0/0:17,3:20:19.02:0,19,418	0/0:30,0:30:81.21:0,81,889	0/0:23,0:23:64.70:0,65,684	0/0:35,2:37:26.18:0,26,745	0/0:15,0:15:39.10:0,39,424	0/0:24,0:24:51.14:0,51,564	0/0:19,0:19:48.12:0,48,524	0/0:13,0:14:32.92:0,33,346	0/0:12,0:12:27.06:0,27,292	0/0:22,0:22:51.10:0,51,546	0/0:17,1:18:22.08:0,22,465	0/0:9,0:9:21.06:0,21,232	0/0:29,0:29:78.15:0,78,834	1/1:1,18:19:47.99:417,48,0	0/1:16,2:18:6.67:7,0,378	0/0:20,1:21:31.08:0,31,556	0/0:12,0:12:33.09:0,33,365	0/0:12,0:12:33.08:0,33,358	0/0:19,0:19:51.13:0,51,554	0/0:15,0:15:39.06:0,39,418	0/0:18,0:18:42.10:0,42,450	0/0:24,0:26:68.73:0,69,694	0/0:37,0:38:99:0,99,1059	0/0:9,0:9:15.04:0,15,166
chr10	96842440	.	C	CA	4683.96	PASS	AB=0.696;AC=45;AF=0.804;AN=56;BaseQRankSum=-3.284;DP=519;FS=7.246;HRun=13;HaplotypeScore=77.0755;InbreedingCoeff=-0.0283;MQ=59.44;MQ0=21;MQRankSum=-0.867;QD=9.84;ReadPosRankSum=1.200;VQSLOD=4.1156;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:28:47.97:253,48,0	1/1:3,7:11:5.78:170,6,0	0/1:36,0:10:11.88:12,0,47	0/0:43,0:10:10.12:0,10,48	1/1:10,9:21:18.13:274,18,0	1/1:7,11:19:6.32:189,6,0	0/1:4,9:13:5.57:96,0,6	1/1:12,19:31:23.20:452,23,0	1/1:6,3:8:11.85:98,12,0	1/1:11,4:17:26.75:218,27,0	1/1:5,12:17:9.45:228,9,0	1/1:10,1:12:20.30:158,20,0	1/1:8,3:11:17.26:135,17,0	0/1:5,3:8:2.61:76,0,3	0/1:7,2:9:11.64:37,0,12	1/1:7,0:16:5.43:30,5,0	0/1:16,10:26:16.22:273,0,16	1/1:14,4:19:3.92:137,4,0	1/1:14,14:26:2.15:326,2,0	1/1:12,7:21:32.18:254,32,0	1/1:3,8:10:15.02:139,15,0	0/1:4,3:7:11.57:47,0,12	1/1:11,7:16:11.81:235,12,0	0/1:2,17:19:4.37:114,0,4	1/1:1,14:15:32.87:293,33,0	1/1:7,13:20:35.27:277,35,0	0/1:6,7:12:24.02:44,0,24	0/1:3,7:10:0.39:119,0,0
chr10	96842630	.	A	AT	1406.29	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-5.718;DP=593;FS=4.280;HRun=10;HaplotypeScore=58.4676;InbreedingCoeff=0.9309;MQ=69.62;MQ0=0;MQRankSum=0.923;QD=21.97;ReadPosRankSum=-0.082;VQSLOD=4.5589;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:30:72.18:767,72,0	0/0:10,0:11:22.94:0,23,167	0/0:15,0:14:7.48:0,7,103	0/0:6,0:6:5.17:0,5,31	0/0:34,0:34:55.07:0,55,611	0/0:17,0:17:41.95:0,42,345	0/0:22,0:23:35.64:0,36,404	0/0:31,0:31:74.87:0,75,609	0/0:20,0:20:53.87:0,54,435	0/0:33,0:34:73.93:0,74,595	0/0:19,0:19:50.91:0,51,419	0/0:22,0:22:59.89:0,60,486	0/0:13,0:13:32.96:0,33,271	0/0:20,0:20:56.88:0,57,457	0/0:22,0:21:56.92:0,57,468	1/1:4,12:17:35.92:366,36,0	0/0:20,0:20:47.92:0,48,392	1/1:1,16:17:39.10:416,39,0	0/0:24,0:24:50.89:0,51,415	0/0:29,0:29:39.94:0,40,527	0/0:15,0:15:35.96:0,36,296	0/0:15,0:15:41.95:0,42,345	0/0:32,0:32:85.64:0,86,704	0/0:20,0:20:56.93:0,57,466	0/0:31,0:31:77.87:0,78,637	0/0:23,0:23:59.91:0,60,493	0/0:17,0:16:41.83:0,42,335	0/0:16,0:16:41.92:0,42,345
chr10	96843644	.	C	CA	520.48	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.680;DP=324;FS=6.892;HRun=4;HaplotypeScore=39.7533;InbreedingCoeff=0.6421;MQ=62.06;MQ0=0;MQRankSum=-0.094;QD=28.92;ReadPosRankSum=0.067;VQSLOD=2.4982;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:48.13:0,48,544	0/0:8,0:8:21.06:0,21,238	0/0:10,0:10:20.95:0,21,201	0/0:5,0:5:9.02:0,9,94	0/0:16,0:16:42.10:0,42,465	0/0:15,0:15:45.13:0,45,510	0/0:12,0:12:24.54:0,25,273	0/0:25,0:25:69.19:0,69,783	0/0:9,0:9:24.07:0,24,270	0/0:13,0:13:36.10:0,36,407	0/0:9,0:9:27.08:0,27,306	0/0:9,0:9:24.07:0,24,272	0/0:13,0:13:30.09:0,30,340	0/0:10,0:10:30.09:0,30,340	0/0:13,0:13:36.10:0,36,408	0/0:10,0:10:24.07:0,24,272	0/0:9,0:9:12.03:0,12,136	1/1:1,17:18:45.15:615,45,0	0/0:19,0:19:51.12:0,51,562	0/0:8,0:8:21.06:0,21,238	0/0:2,0:2:3.01:0,3,34	0/0:5,0:5:15.04:0,15,170	0/0:10,0:10:27.08:0,27,306	0/0:6,0:6:9.03:0,9,102	0/0:14,0:13:39.11:0,39,439	0/0:16,0:16:48.10:0,48,531	0/0:17,0:17:36.10:0,36,408	0/0:1,0:1:3.01:0,3,34
chr10	96844335	.	A	AG	16533.85	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.858;DP=416;FS=6.751;HRun=1;HaplotypeScore=50.0333;InbreedingCoeff=0.7667;MQ=47.62;MQ0=4;MQRankSum=2.461;QD=40.82;ReadPosRankSum=2.123;VQSLOD=5.2787;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:57.19:854,57,0	1/1:0,7:7:18.06:270,18,0	0/0:7,0:2:5.23:0,5,45	0/0:4,0:1:3.01:0,3,35	1/1:1,16:17:45.15:673,45,0	1/1:0,16:16:42.14:623,42,0	1/1:1,11:12:33.07:469,33,0	1/1:4,9:13:39.13:583,39,0	1/1:0,18:18:54.18:809,54,0	1/1:0,23:23:69.23:1014,69,0	1/1:0,6:6:18.06:269,18,0	1/1:0,17:17:51.13:739,51,0	1/1:0,13:13:27.09:404,27,0	1/1:0,14:14:39.13:584,39,0	1/1:0,15:15:45.15:674,45,0	1/1:2,20:22:63.21:943,63,0	1/1:1,19:20:57.15:827,57,0	1/1:0,17:17:51.17:764,51,0	1/1:3,12:13:33.11:494,33,0	1/1:1,16:17:48.16:717,48,0	1/1:1,18:19:54.18:809,54,0	1/1:1,14:15:36.08:514,36,0	1/1:0,20:20:51.17:763,51,0	1/1:0,10:10:27.09:405,27,0	1/1:1,17:17:45.15:674,45,0	1/1:2,17:19:54.18:809,54,0	1/1:1,18:19:51.17:764,51,0	1/1:0,2:2:6.02:90,6,0
chr10	96844614	.	AGAG	A	198.66	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.926;DP=673;FS=1.111;HRun=0;HaplotypeScore=100.4470;InbreedingCoeff=0.4886;MQ=55.20;MQ0=6;MQRankSum=-0.328;QD=13.24;ReadPosRankSum=0.968;VQSLOD=3.4864;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,120,2239	0/0:7,0:7:18.06:0,18,353	0/0:17,0:6:9.03:0,9,177	0/0:24,0:8:14.84:0,15,270	0/0:20,0:20:48.16:0,48,945	0/0:29,0:29:49.95:0,50,1149	0/0:23,0:23:50.60:0,51,900	0/0:20,0:20:24.08:0,24,425	0/0:26,0:26:54.19:0,54,1052	0/0:27,0:27:57.19:0,57,1086	0/0:17,0:17:45.15:0,45,869	0/0:28,0:28:63.22:0,63,1243	0/0:17,0:17:36.11:0,36,680	0/0:16,0:16:3.38:0,3,637	0/0:31,0:30:69.23:0,69,1343	0/0:33,0:33:72.25:0,72,1439	0/0:33,0:33:75.25:0,75,1453	1/1:7,8:15:0.07:273,0,0	0/0:20,0:18:45.15:0,45,885	0/0:24,0:24:42.14:0,42,848	0/0:27,0:27:21.39:0,21,1055	0/0:19,0:17:39.13:0,39,776	0/0:20,0:20:45.15:0,45,813	0/0:44,0:44:99:0,102,2182	0/0:15,0:15:39.13:0,39,731	0/0:32,0:32:78.26:0,78,1536	0/0:23,0:23:51.17:0,51,981	0/0:12,0:11:30.10:0,30,552
chr10	96845905	.	A	AAAAC	23966.40	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.607;DP=583;FS=0.000;HRun=0;HaplotypeScore=79.7320;InbreedingCoeff=0.9620;MQ=51.76;MQ0=17;MQRankSum=0.768;QD=43.89;ReadPosRankSum=2.586;VQSLOD=4.7103;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,19:28:41.35:913,41,0	1/1:1,7:8:15.05:368,15,0	0/0:21,0:7:21.06:0,21,305	0/0:16,0:6:18.05:0,18,263	1/1:8,20:28:48.16:1142,48,0	1/1:4,21:23:57.20:1386,57,0	1/1:8,15:24:39.13:950,39,0	1/1:14,20:35:63.18:1214,63,0	1/1:6,11:18:15.99:719,16,0	1/1:5,16:21:48.15:1129,48,0	1/1:5,17:24:45.15:1051,45,0	1/1:4,14:18:33.11:811,33,0	1/1:3,13:16:39.13:946,39,0	1/1:2,4:6:15.05:361,15,0	1/1:3,17:20:33.11:767,33,0	1/1:8,25:33:63.02:1521,63,0	1/1:12,21:34:57.19:1395,57,0	1/1:12,19:31:49.39:1195,49,0	1/1:4,6:9:18.02:362,18,0	1/1:4,9:14:30.03:681,30,0	1/1:6,12:17:35.72:877,36,0	1/1:5,11:18:36.04:757,36,0	1/1:3,10:13:21.07:516,21,0	1/1:3,15:19:42.14:990,42,0	1/1:3,11:14:27.09:656,27,0	1/1:6,19:25:51.13:1122,51,0	1/1:5,23:30:66.23:1622,66,0	1/1:0,9:9:21.07:516,21,0
chr10	96847601	.	CCAATCAAT	C	23912.06	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=8.976;DP=756;FS=3.521;HRun=0;HaplotypeScore=205.8264;InbreedingCoeff=0.9776;MQ=59.12;MQ0=5;MQRankSum=-10.015;QD=35.90;ReadPosRankSum=2.233;VQSLOD=4.7848;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,27:45:60.21:1479,60,0	1/1:4,18:22:33.11:772,33,0	0/0:28,0:21:21.07:0,21,644	0/0:32,0:29:51.17:0,51,1510	1/1:10,20:30:45.15:1069,45,0	1/1:7,19:26:45.15:1106,45,0	1/1:12,16:28:33.11:839,33,0	1/1:21,8:29:24.08:584,24,0	1/1:10,13:23:27.09:691,27,0	1/1:11,23:34:57.18:1458,57,0	1/1:1,16:17:39.13:949,39,0	1/1:10,22:32:48.16:1228,48,0	1/1:8,14:22:24.08:614,24,0	1/1:14,19:33:51.18:1304,51,0	1/1:14,21:35:60.21:1513,60,0	1/1:8,24:32:63.22:1611,63,0	1/1:15,14:29:24.08:592,24,0	0/0:30,0:30:75.26:0,75,3066	1/1:10,11:21:33.11:831,33,0	1/1:9,7:16:21.07:471,21,0	1/1:25,17:42:30.10:676,30,0	1/1:1,19:20:48.16:1129,48,0	1/1:7,13:20:30.10:742,30,0	1/1:15,11:26:15.05:361,15,0	1/1:4,17:21:39.13:954,39,0	1/1:11,20:31:60.19:1483,60,0	1/1:11,15:26:45.15:1151,45,0	1/1:1,5:6:12.04:307,12,0
chr10	96848584	.	G	GT	11183.74	PASS	AB=0.565;AC=44;AF=0.786;AN=56;BaseQRankSum=-9.626;DP=648;FS=1.370;HRun=10;HaplotypeScore=69.7677;InbreedingCoeff=0.8160;MQ=73.65;MQ0=0;MQRankSum=-1.664;QD=20.60;ReadPosRankSum=0.097;VQSLOD=5.7068;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:74.45:0,74,597	1/1:1,10:11:15.04:160,15,0	0/0:13,0:14:20.25:0,20,124	0/0:16,0:17:34.02:0,34,256	1/1:10,17:27:51.39:487,51,0	1/1:4,14:20:42.66:414,43,0	1/1:2,21:24:35.34:566,35,0	1/1:9,20:30:41.30:602,41,0	1/1:2,16:18:39.10:416,39,0	1/1:7,20:28:19.63:564,20,0	1/1:3,22:26:65.88:649,66,0	1/1:2,23:25:38.11:586,38,0	1/1:1,13:14:24.06:256,24,0	1/1:2,19:21:20.46:417,20,0	1/1:4,15:19:11.45:327,11,0	0/0:18,0:18:44.91:0,45,366	1/1:6,19:25:23.48:455,23,0	0/0:24,0:24:68.79:0,69,549	1/1:7,11:19:33:328,33,0	1/1:4,16:20:44.95:430,45,0	1/1:3,22:25:57.01:591,57,0	0/1:5,12:17:1.35:375,0,1	1/1:13,7:20:44.73:410,45,0	1/1:7,31:39:24.21:838,24,0	1/1:6,16:23:38.93:398,39,0	1/1:12,23:35:71.99:738,72,0	1/1:1,31:32:68.90:724,69,0	0/1:4,21:25:17.75:454,0,18
chr10	96850767	.	C	CT	3191.50	PASS	AB=0.820;AC=46;AF=0.821;AN=56;BaseQRankSum=-2.198;DP=405;FS=13.176;HRun=10;HaplotypeScore=115.9744;InbreedingCoeff=0.5485;MQ=44.59;MQ0=13;MQRankSum=-0.324;QD=10.16;ReadPosRankSum=0.145;VQSLOD=1.2084;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:15.77:0,16,136	1/1:3,7:10:20.42:200,20,0	0/0:31,0:8:8.94:0,9,73	0/1:29,0:9:0.23:0,0,41	1/1:2,8:10:14.98:142,15,0	1/1:3,6:9:18.01:180,18,0	1/1:2,12:12:2.41:218,2,0	1/1:19,6:24:1.63:172,2,0	1/1:2,6:8:6.02:64,6,0	1/1:8,6:14:23.70:223,24,0	1/1:4,2:8:5.85:46,6,0	1/1:9,9:18:24.06:254,24,0	1/1:4,8:12:11.99:115,12,0	1/1:3,3:6:2.98:32,3,0	1/1:8,2:10:9.91:98,10,0	0/0:13,0:13:8.55:0,9,52	1/1:3,15:18:32.78:322,33,0	0/0:20,0:20:29.84:0,30,235	1/1:12,11:20:28.62:292,29,0	1/1:8,6:13:14.99:146,15,0	1/1:2,3:5:3.01:32,3,0	1/1:5,2:5:6.01:62,6,0	1/1:1,8:7:18:179,18,0	1/1:7,5:9:3.01:32,3,0	1/1:5,8:11:18.51:189,19,0	1/1:10,6:15:12.03:127,12,0	0/1:6,9:14:15.15:81,0,15	1/1:2,4:6:14.95:145,15,0
chr10	96851242	.	C	CA	1005.74	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.977;DP=555;FS=10.287;HRun=3;HaplotypeScore=100.9574;InbreedingCoeff=0.8648;MQ=73.26;MQ0=3;MQRankSum=-3.851;QD=23.95;ReadPosRankSum=1.064;VQSLOD=2.2796;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,18:25:31.68:668,32,0	0/0:7,0:7:17.33:0,17,96	0/0:35,0:26:63.06:0,63,726	0/0:26,0:24:43.06:0,43,632	0/0:18,0:18:38.92:0,39,207	0/0:35,0:35:84.55:0,85,454	0/0:14,0:14:37.26:0,37,198	0/0:24,0:24:49.53:0,50,250	0/0:22,0:22:57.54:0,58,305	0/0:10,0:10:27.93:0,28,128	0/0:22,0:22:60.15:0,60,316	0/0:17,0:17:0.50:0,0,176	0/0:5,0:5:14.31:0,14,73	0/0:22,0:22:60.50:0,60,304	0/0:10,0:10:26.45:0,26,128	1/1:4,13:17:16.95:456,17,0	0/0:19,0:19:54.82:0,55,293	0/0:28,0:28:49.56:0,50,353	0/0:26,0:26:58.91:0,59,293	0/0:16,0:16:31.57:0,32,173	0/0:21,0:21:48.84:0,49,253	0/0:17,0:17:43.18:0,43,243	0/0:18,0:18:24.04:0,24,212	0/0:15,0:15:33.59:0,34,202	0/0:18,0:18:45.86:0,46,240	0/0:27,0:27:36.82:0,37,290	0/0:21,0:21:21.81:0,22,204	0/0:20,0:20:46.08:0,46,249
chr10	96865345	.	C	CA	309.30	PASS	AB=0.977;AC=15;AF=0.288;AN=52;BaseQRankSum=-5.049;DP=244;FS=11.023;HRun=0;HaplotypeScore=143.6664;InbreedingCoeff=0.0561;MQ=84.97;MQ0=0;MQRankSum=5.079;QD=2.60;ReadPosRankSum=-6.637;VQSLOD=-0.2588;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:17.89:0,18,56	0/0:1,0:1:1.25:0,1,3	1/1:7,2:9:0.37:57,0,0	0/1:11,4:15:3.79:98,0,4	1/1:9,0:8:0.10:68,0,0	0/0:7,0:7:9.92:0,10,28	0/1:12,0:12:25.78:26,0,29	0/0:20,0:20:33.13:0,33,118	0/0:12,0:12:12.82:0,13,40	0/1:9,0:9:7.67:8,0,33	./.	0/1:13,0:13:20.95:21,0,45	0/1:7,0:7:8.13:31,0,8	0/0:4,0:4:3.69:0,4,9	0/0:11,0:11:15.06:0,15,50	0/0:13,0:13:16.49:0,16,44	0/1:10,0:10:13.25:13,0,28	0/0:5,0:5:2.84:0,3,9	0/1:10,0:10:11.75:43,0,12	1/1:3,0:3:0.69:21,1,0	0/1:11,0:11:6.88:14,0,7	0/0:4,0:3:5.41:0,5,15	0/0:9,0:9:12.59:0,13,34	0/0:12,0:11:10.01:0,10,30	0/0:1,0:1:1.25:0,1,3	0/1:11,0:11:0.50:44,0,1	0/0:10,0:10:9.14:0,9,23	./.
chr10	96865395	.	TGG	T	1108.16	PASS	AB=0.950;AC=32;AF=0.762;AN=42;BaseQRankSum=-2.703;DP=128;FS=5.900;HRun=6;HaplotypeScore=61.4026;InbreedingCoeff=0.2892;MQ=88.89;MQ0=4;MQRankSum=-0.363;QD=10.97;ReadPosRankSum=-0.944;VQSLOD=-0.5060;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:5.18:5,0,78	1/1:1,2:3:8.96:93,9,0	0/1:12,0:9:12.49:12,0,31	0/0:7,0:6:3.45:0,3,27	./.	1/1:1,1:2:5.95:54,6,0	1/1:1,1:9:6.01:64,6,0	1/1:2,0:12:23.99:258,24,0	0/0:0,0:3:0:0,0,0	1/1:1,4:6:12.50:138,13,0	./.	1/1:2,1:3:5.95:43,6,0	1/1:2,1:2:3:26,3,0	1/1:2,1:3:6.02:70,6,0	1/1:3,0:3:5.93:51,6,0	0/0:8,0:8:16.26:0,16,116	1/1:2,0:2:3.48:39,3,0	0/1:7,0:7:7.86:8,0,8	1/1:3,0:4:8.80:73,9,0	./.	0/1:3,1:4:0:0,0,0	./.	./.	1/1:0,2:2:3.01:34,3,0	./.	1/1:0,4:6:9.03:112,9,0	1/1:3,3:7:15.02:149,15,0	./.
chr10	96865401	.	GA	G	885.70	PASS	AB=0.950;AC=32;AF=0.762;AN=42;BaseQRankSum=-0.245;DP=163;FS=15.883;HRun=1;HaplotypeScore=63.4689;InbreedingCoeff=0.2178;MQ=63.84;MQ0=17;MQRankSum=-2.333;QD=7.09;ReadPosRankSum=0.995;VQSLOD=-0.7362;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:10.19:0,10,175	1/1:4,1:4:9.72:58,10,0	0/0:8,0:5:2.21:0,2,54	0/1:6,0:4:3.34:3,0,10	./.	1/1:1,1:2:5.91:38,6,0	1/1:8,1:8:5.99:61,6,0	1/1:13,1:13:17.62:187,18,0	0/1:4,0:4:0:0,0,0	1/1:6,1:6:11.64:90,12,0	./.	1/1:1,2:3:5.98:56,6,0	1/1:2,1:2:3.01:40,3,0	1/1:3,3:5:3.29:30,3,0	1/1:0,4:4:5.90:37,6,0	0/1:17,0:17:10.88:11,0,182	0/1:4,0:4:9.01:30,0,9	0/1:7,0:7:10.77:11,0,12	1/1:3,2:4:8.17:101,8,0	./.	0/1:4,3:7:0.02:0,0,0	./.	./.	1/1:6,0:5:2.94:18,3,0	./.	1/1:7,0:7:8.82:61,9,0	1/1:5,4:8:14.94:174,15,0	./.
chr10	96865410	.	G	GGA	150.19	PASS	AB=0.905;AC=9;AF=0.196;AN=46;BaseQRankSum=0.587;DP=251;FS=42.769;HRun=0;HaplotypeScore=77.7851;InbreedingCoeff=0.1670;MQ=45.77;MQ0=26;MQRankSum=-3.370;QD=1.88;ReadPosRankSum=-2.067;VQSLOD=-0.2376;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,3:20:14.86:0,15,107	1/1:7,0:6:0.30:1,0,0	./.	./.	0/0:5,0:5:5.91:0,6,37	0/0:6,0:5:5.87:0,6,40	0/0:14,0:13:11.92:0,12,86	1/1:23,0:22:15.82:80,16,0	./.	0/0:8,0:6:0.88:0,1,2	0/0:3,0:2:2.92:0,3,17	0/0:10,0:10:8.35:0,8,55	0/0:5,0:4:2.87:0,3,15	0/0:10,0:7:2.86:0,3,20	0/0:6,0:6:2.96:0,3,19	0/1:13,5:18:16.81:160,0,17	0/1:12,0:12:3.84:4,0,62	./.	0/0:9,0:8:5.26:0,5,26	0/0:5,0:3:2.96:0,3,19	0/0:12,0:12:5.49:0,5,37	./.	0/0:4,0:3:2.97:0,3,20	0/0:11,0:10:8.86:0,9,60	0/0:7,0:7:8.89:0,9,58	0/0:9,0:9:7.33:0,7,62	0/1:13,0:13:9.01:9,0,34	1/1:6,0:1:0.47:1,0,0
chr10	96865694	.	GGAAAA	G	611.72	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.577;DP=622;FS=0.000;HRun=0;HaplotypeScore=136.8933;InbreedingCoeff=0.3960;MQ=53.23;MQ0=8;MQRankSum=2.999;QD=24.47;ReadPosRankSum=2.688;VQSLOD=3.4528;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:78.14:0,78,1844	0/0:7,0:7:9.03:0,9,158	0/0:46,0:20:3.01:0,3,40	0/0:69,0:26:6.04:0,6,32	0/0:16,0:17:14.83:0,15,195	0/0:12,0:12:9.03:0,9,185	0/0:20,0:20:23.97:0,24,305	0/0:46,0:45:41.23:0,41,582	0/0:15,0:15:9.03:0,9,188	0/0:19,0:19:29.75:0,30,393	0/0:13,0:13:3.01:0,3,57	0/0:18,0:18:14.88:0,15,312	0/0:19,0:19:18.53:0,19,350	0/0:15,0:15:12.04:0,12,248	0/0:27,0:27:9.03:0,9,187	0/0:19,0:19:30.07:0,30,583	0/0:27,0:26:19.84:0,20,156	1/1:11,14:24:38.60:705,39,0	0/0:24,0:23:21.06:0,21,317	0/0:16,0:16:15.05:0,15,250	0/0:13,0:13:5.48:0,5,75	0/0:13,0:13:11.87:0,12,141	0/0:16,0:16:12.51:0,13,190	0/0:15,0:15:9.49:0,9,123	0/0:17,0:17:6.02:0,6,120	0/0:27,0:27:50.03:0,50,625	0/0:23,0:23:15.05:0,15,314	0/0:5,0:5:3.01:0,3,35
chr10	96865713	.	A	AAGAAAAGAAG	15313.19	PASS	AB=0.984;AC=48;AF=0.857;AN=56;BaseQRankSum=-6.585;DP=669;FS=6.144;HRun=0;HaplotypeScore=125.0051;InbreedingCoeff=0.6235;MQ=59.31;MQ0=12;MQRankSum=-4.804;QD=25.95;ReadPosRankSum=-2.488;VQSLOD=3.1709;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,2279	1/1:0,10:10:11.91:357,12,0	0/1:28,0:9:2.70:3,0,19	0/1:65,0:17:23.55:24,0,113	1/1:2,18:24:35.78:694,36,0	1/1:1,13:16:9.03:447,9,0	1/1:19,0:19:48.04:602,48,0	1/1:49,0:48:99:1279,114,0	1/1:2,12:14:9.03:435,9,0	1/1:2,18:27:68.96:1274,69,0	1/1:0,15:16:14.96:276,15,0	1/1:1,16:19:14.84:701,15,0	1/1:3,14:20:18.53:889,19,0	1/1:1,12:13:12.04:607,12,0	1/1:2,24:29:9.03:430,9,0	0/0:17,0:17:45.09:0,45,768	1/1:28,0:27:74.31:885,74,0	0/0:24,0:23:17.19:0,17,1065	1/1:4,18:24:66:1272,66,0	1/1:2,15:17:17.99:644,18,0	1/1:20,0:20:47.69:534,48,0	1/1:3,14:19:23.91:418,24,0	1/1:1,13:14:8.35:354,8,0	1/1:2,17:23:8.94:309,9,0	1/1:2,16:23:6.02:280,6,0	1/1:2,26:33:84.10:1707,84,0	1/1:2,18:21:15.05:746,15,0	1/1:2,13:13:3.01:147,3,0
chr10	96866077	.	A	AGCGCGC	6418.17	PASS	AB=0.857;AC=45;AF=0.833;AN=54;BaseQRankSum=3.207;DP=473;FS=4.768;HRun=0;HaplotypeScore=103.6809;InbreedingCoeff=0.4256;MQ=77.15;MQ0=6;MQRankSum=-5.938;QD=16.98;ReadPosRankSum=-1.491;VQSLOD=3.8709;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,1:25:0.24:0,0,1	1/1:2,0:2:6.02:111,6,0	0/0:29,0:22:57.19:0,57,1237	0/0:34,0:27:54.34:0,54,1395	1/1:5,12:21:1.96:76,2,0	1/1:14,0:14:8.06:159,8,0	1/1:4,13:19:2.96:34,3,0	1/1:26,0:24:48.15:785,48,0	1/1:5,0:5:9.03:234,9,0	1/1:10,11:22:54.05:1033,54,0	1/1:15,0:15:7.08:69,7,0	1/1:16,0:16:9.03:241,9,0	1/1:11,0:11:5.95:180,6,0	1/1:17,0:17:5.05:96,5,0	1/1:19,0:19:9.03:269,9,0	1/1:13,0:13:6.02:133,6,0	1/1:17,0:17:9.03:222,9,0	0/1:23,0:24:6.79:7,0,991	1/1:8,5:13:25.35:435,25,0	1/1:10,0:9:3.01:98,3,0	./.	0/0:4,6:10:0:0,0,1	1/1:15,0:15:2.15:81,2,0	0/1:21,0:21:0:0,0,0	1/1:10,0:10:12.04:331,12,0	1/1:5,16:23:51.13:1297,51,0	1/1:9,0:9:4.58:93,5,0	1/1:10,0:10:15.05:433,15,0
chr10	96866080	.	G	GCGCGCGCACA	10450.59	PASS	AB=0.823;AC=49;AF=0.875;AN=56;BaseQRankSum=-0.721;DP=553;FS=6.785;HRun=0;HaplotypeScore=146.0421;InbreedingCoeff=0.3478;MQ=67.96;MQ0=9;MQRankSum=-6.775;QD=21.24;ReadPosRankSum=-1.417;VQSLOD=3.5452;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:0.30:1,0,0	1/1:2,0:2:6.02:111,6,0	0/0:26,0:19:57.19:0,57,1237	0/0:35,0:25:54.34:0,54,1393	1/1:20,0:20:2.71:127,3,0	1/1:3,12:20:9.03:454,9,0	1/1:23,0:22:6.42:232,6,0	1/1:27,0:24:62.87:949,63,0	1/1:3,0:9:11.87:539,12,0	1/1:19,0:19:57.17:1336,57,0	1/1:2,7:20:3.01:73,3,0	1/1:7,9:23:8.59:377,9,0	1/1:6,7:17:11.93:395,12,0	1/1:9,11:23:14.66:371,15,0	0/1:6,16:26:27.29:755,0,27	1/1:4,0:15:12.04:453,12,0	1/1:6,10:22:9.50:334,10,0	0/1:24,0:28:76.77:77,0,1184	1/1:11,0:10:20.05:469,20,0	1/1:2,0:10:6.02:270,6,0	1/1:24,0:24:3:25,3,0	1/1:11,0:11:2.71:50,3,0	1/1:9,1:20:2.81:94,3,0	1/1:5,17:30:0.26:1,0,0	1/1:3,7:15:12.04:555,12,0	1/1:22,0:22:53.52:1510,54,0	1/1:4,7:14:9:238,9,0	1/1:2,7:13:15.05:653,15,0
chr10	96866314	.	T	TA	7302.90	PASS	AB=0.597;AC=50;AF=0.893;AN=56;BaseQRankSum=-5.433;DP=529;FS=2.771;HRun=13;HaplotypeScore=54.8931;InbreedingCoeff=0.3857;MQ=66.87;MQ0=0;MQRankSum=-3.078;QD=14.35;ReadPosRankSum=0.435;VQSLOD=5.5601;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,21:26:39.04:362,39,0	1/1:1,5:6:12.01:111,12,0	0/0:10,0:8:9.38:0,9,70	0/0:8,0:9:7.22:0,7,54	1/1:2,13:15:29.99:270,30,0	1/1:3,19:23:30.31:410,30,0	1/1:8,14:23:9.39:217,9,0	1/1:5,12:21:35.55:294,36,0	1/1:8,15:25:21.41:332,21,0	1/1:15,18:33:44.97:395,45,0	1/1:3,11:14:6.52:202,7,0	0/1:9,15:24:8.11:218,0,8	1/1:5,15:20:36.04:334,36,0	1/1:9,13:22:3.44:174,3,0	1/1:5,18:23:45.04:414,45,0	1/1:2,9:11:3.44:174,3,0	0/1:7,18:26:28.43:323,0,28	1/1:2,18:20:39.04:362,39,0	1/1:9,19:28:34.75:440,35,0	1/1:3,8:11:6.40:194,6,0	1/1:6,7:13:0.44:147,0,0	1/1:2,9:11:23.89:202,24,0	1/1:3,9:12:7.39:129,7,0	1/1:2,19:22:47.89:432,48,0	1/1:2,12:14:24.03:223,24,0	1/1:8,20:28:50.95:455,51,0	1/1:6,18:24:15.44:279,15,0	1/1:4,9:14:23.86:209,24,0
chr10	96866464	.	C	CGT	7669.99	PASS	AB=0.650;AC=39;AF=0.722;AN=54;BaseQRankSum=-3.954;DP=596;FS=5.446;HRun=0;HaplotypeScore=88.8581;InbreedingCoeff=-0.1163;MQ=68.96;MQ0=21;MQRankSum=0.178;QD=14.64;ReadPosRankSum=0.835;VQSLOD=4.4071;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:25:8.98:79,9,0	1/1:2,5:7:9.03:140,9,0	0/0:31,0:20:12.03:0,12,131	0/0:33,0:29:0.85:0,1,89	0/1:4,7:11:16.59:215,0,17	0/1:13,14:27:24.67:256,0,25	1/1:9,9:17:15.05:222,15,0	1/1:23,12:35:35.21:550,35,0	1/1:18,10:27:27.09:419,27,0	1/1:12,6:19:21.06:304,21,0	1/1:4,7:11:12.04:187,12,0	0/1:6,18:24:36.17:358,0,36	0/1:9,12:21:36.18:385,0,36	1/1:7,11:19:26.83:384,27,0	0/1:7,14:19:4.52:389,0,5	1/1:6,1:14:3:26,3,0	1/1:14,18:34:10.49:597,10,0	1/1:7,1:18:27.01:257,27,0	0/1:11,8:18:81.97:337,0,82	1/1:2,4:6:9.03:140,9,0	0/1:17,26:41:99:460,0,157	0/1:4,8:12:16.55:214,0,17	0/1:5,2:7:33.71:125,0,34	0/1:16,20:34:64.49:555,0,64	./.	1/1:9,17:26:45.13:661,45,0	0/1:13,7:21:73.80:271,0,74	1/1:5,5:10:9.03:140,9,0
chr10	96866578	.	C	CGT	998.76	PASS	AB=0.906;AC=40;AF=0.833;AN=48;BaseQRankSum=0.445;DP=457;FS=20.748;HRun=0;HaplotypeScore=142.4721;InbreedingCoeff=0.1495;MQ=56.97;MQ0=7;MQRankSum=-0.380;QD=2.77;ReadPosRankSum=0.293;VQSLOD=1.2260;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:38:2.37:8,2,0	1/1:1,1:2:3.01:45,3,0	1/1:20,0:11:0.47:1,0,0	./.	0/0:8,0:8:2.90:0,3,33	1/1:13,3:15:2.01:35,2,0	1/1:19,3:21:9.99:85,10,0	1/1:32,0:32:7.18:43,7,0	1/1:14,2:16:7.58:94,8,0	0/1:13,1:14:11.27:11,0,56	1/1:7,2:9:6.02:90,6,0	0/1:12,5:17:0:1,0,0	1/1:9,1:10:1.55:4,2,0	1/1:19,2:21:4.04:50,4,0	1/1:8,2:10:3.01:37,3,0	1/1:13,1:14:1.14:41,1,0	0/1:20,2:21:14.27:195,0,14	0/1:13,0:13:11.96:12,0,57	1/1:10,0:9:2.98:21,3,0	./.	0/0:43,0:41:6.92:0,7,57	./.	1/1:5,0:5:3:25,3,0	1/1:31,3:34:0.47:1,0,0	1/1:6,3:10:9.13:90,9,0	1/1:11,2:13:7.27:93,7,0	1/1:9,2:11:9.03:135,9,0	./.
chr10	96868897	.	AAG	A	11123.19	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-8.394;DP=594;FS=0.543;HRun=0;HaplotypeScore=80.1325;InbreedingCoeff=0.9613;MQ=66.17;MQ0=8;MQRankSum=1.286;QD=23.82;ReadPosRankSum=1.286;VQSLOD=5.4979;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:57.13:0,57,825	1/1:1,6:7:15.05:182,15,0	0/0:39,0:16:11.06:0,11,180	0/0:37,0:18:21.07:0,21,318	1/1:8,20:28:56.92:636,57,0	1/1:3,10:13:14.83:182,15,0	1/1:5,14:19:14.17:412,14,0	1/1:7,11:18:30.08:351,30,0	1/1:4,12:16:36.11:437,36,0	1/1:3,22:25:66.20:799,66,0	1/1:3,9:13:26.91:305,27,0	1/1:5,16:21:39.12:473,39,0	1/1:2,12:14:30.09:364,30,0	1/1:2,26:28:63.19:764,63,0	1/1:3,14:17:33.10:400,33,0	0/0:25,1:26:29.79:0,30,919	1/1:4,27:31:57.17:692,57,0	1/1:9,21:30:16.47:569,16,0	1/1:5,13:17:36.09:422,36,0	1/1:4,14:18:39.03:440,39,0	1/1:6,15:21:39.12:473,39,0	1/1:3,19:22:51.11:602,51,0	1/1:4,14:18:36.11:437,36,0	1/1:4,15:19:33.10:400,33,0	1/1:3,15:18:36.11:437,36,0	1/1:2,23:24:66.20:801,66,0	1/1:4,13:17:33.10:400,33,0	1/1:6,5:11:12.04:146,12,0
chr10	96869215	.	AGCATG	A	28007.16	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=11.435;DP=594;FS=2.461;HRun=0;HaplotypeScore=135.8904;InbreedingCoeff=0.9655;MQ=66.65;MQ0=0;MQRankSum=-5.491;QD=56.69;ReadPosRankSum=2.544;VQSLOD=5.3883;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,3568	1/1:0,6:6:15.05:347,15,0	0/0:10,0:10:23.26:0,23,522	0/0:9,0:9:14.54:0,15,388	1/1:1,20:21:45.15:1010,45,0	1/1:0,27:27:69.24:1607,69,0	1/1:0,33:33:90.31:2093,90,0	1/1:0,16:16:48.16:1096,48,0	1/1:0,26:26:72.25:1677,72,0	1/1:0,24:24:66.21:1463,66,0	1/1:0,3:3:6.02:138,6,0	1/1:0,31:31:78.27:1811,78,0	1/1:1,30:31:87.30:1980,87,0	1/1:0,21:21:54.19:1253,54,0	1/1:0,16:16:48.16:1118,48,0	0/0:20,0:20:60.19:0,60,1911	1/1:0,46:46:99:2376,102,0	0/0:23,0:23:69.24:0,69,2299	1/1:0,13:13:33.11:768,33,0	1/1:0,10:11:27.06:578,27,0	1/1:0,47:47:92.82:2092,93,0	1/1:0,22:22:45.11:997,45,0	1/1:0,10:10:18.06:381,18,0	1/1:0,20:20:42.14:978,42,0	1/1:0,15:15:36.12:786,36,0	1/1:0,22:22:63.22:1434,63,0	1/1:0,21:21:57.20:1325,57,0	1/1:0,12:12:30.10:699,30,0
chr10	96869406	.	TA	T	752.09	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.697;DP=664;FS=2.784;HRun=2;HaplotypeScore=81.6087;InbreedingCoeff=0.9997;MQ=86.23;MQ0=0;MQRankSum=-9.117;QD=13.93;ReadPosRankSum=0.122;VQSLOD=2.9568;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,22:34:62.93:451,63,0	0/0:13,0:13:39.11:0,39,545	0/0:28,0:28:37.24:0,37,971	0/0:19,0:19:44.40:0,44,623	0/0:17,0:17:51.16:0,51,746	0/0:22,0:22:66.19:0,66,965	0/0:25,0:25:69.23:0,69,1032	0/0:22,0:22:66.20:0,66,952	0/0:30,0:30:84.28:0,84,1258	0/0:27,0:27:78.23:0,78,1157	0/0:17,0:17:48.16:0,48,718	0/0:19,0:19:51.16:0,51,746	0/0:31,0:31:87.29:0,87,1303	0/0:24,0:24:72.24:0,72,1070	0/0:27,0:27:81.26:0,81,1193	1/1:2,18:20:59.54:422,60,0	0/0:33,0:33:99:0,99,1480	0/0:24,0:24:72.23:0,72,1056	0/0:21,0:21:63.20:0,63,914	0/0:21,0:21:63.21:0,63,944	0/0:44,0:44:99:0,126,1864	0/0:21,0:21:60.20:0,60,899	0/0:12,0:12:36.12:0,36,538	0/0:36,0:36:99:0,108,1593	0/0:13,0:12:39.13:0,39,583	0/0:28,0:27:84.28:0,84,1240	0/0:25,0:25:75.25:0,75,1124	0/0:11,0:11:33.11:0,33,490
chr10	96869409	.	CTACCGCTTA	C	2909.98	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.561;DP=643;FS=1.266;HRun=0;HaplotypeScore=181.1219;InbreedingCoeff=0.9996;MQ=85.53;MQ0=0;MQRankSum=-9.855;QD=66.14;ReadPosRankSum=0.558;VQSLOD=3.7479;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:66.08:1537,66,0	0/0:12,0:12:36.12:0,36,1690	0/0:26,0:26:78.24:0,78,3180	0/0:18,0:18:52.28:0,52,1752	0/0:16,0:16:48.12:0,48,1945	0/0:22,0:22:66.23:0,66,3220	0/0:25,0:25:72.22:0,72,3234	0/0:23,0:23:69.23:0,69,2859	0/0:30,0:30:84.27:0,84,3815	0/0:26,0:26:75.26:0,75,3713	0/0:17,0:17:51.18:0,51,2487	0/0:17,0:17:51.17:0,51,2352	0/0:29,0:29:87.30:0,87,4291	0/0:26,0:26:78.27:0,78,3673	0/0:26,0:26:78.27:0,78,3912	1/1:1,18:19:57.20:1495,57,0	0/0:32,0:32:96.33:0,96,4456	0/0:24,0:24:72.19:0,72,3246	0/0:20,0:20:60.17:0,60,2907	0/0:22,0:22:66.23:0,66,3122	0/0:43,0:43:99:0,129,5619	0/0:21,0:21:63.22:0,63,2938	0/0:12,0:12:36.12:0,36,1611	0/0:33,0:33:99:0,99,4725	0/0:13,0:12:39.13:0,39,1928	0/0:30,0:29:90.30:0,90,4323	0/0:26,0:26:78.27:0,78,3883	0/0:10,0:10:30.10:0,30,1383
chr10	96872205	.	TCACACA	T	4859.95	PASS	AB=0.990;AC=37;AF=0.712;AN=52;BaseQRankSum=-4.643;DP=492;FS=15.680;HRun=0;HaplotypeScore=115.1666;InbreedingCoeff=0.5068;MQ=56.68;MQ0=18;MQRankSum=2.320;QD=15.63;ReadPosRankSum=1.926;VQSLOD=3.4832;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:44.98:0,45,1059	1/1:5,0:9:12.03:173,12,0	0/0:31,0:12:6.02:0,6,125	0/0:23,0:11:9.03:0,9,137	./.	1/1:13,0:20:1.83:23,2,0	1/1:14,0:14:18.06:367,18,0	0/1:16,0:15:37.71:49,0,38	1/1:9,0:9:6.02:122,6,0	1/1:14,0:12:11.59:188,12,0	1/1:16,0:18:1.47:323,1,0	1/1:14,0:16:19.37:391,19,0	1/1:9,0:9:6.02:111,6,0	1/1:10,0:9:12.03:208,12,0	1/1:17,0:17:18.05:314,18,0	0/0:19,0:19:32.78:0,33,761	1/1:18,0:16:16.51:256,17,0	0/0:6,0:13:11.98:0,12,217	1/1:11,1:12:12.04:242,12,0	0/0:10,7:17:0:0,0,0	1/1:14,0:13:18.04:254,18,0	1/1:14,0:14:24.05:393,24,0	0/1:11,0:11:14.53:35,0,15	0/1:31,0:33:31.69:159,0,32	./.	1/1:23,2:25:42.03:677,42,0	1/1:14,1:15:9.43:196,9,0	1/1:12,0:12:24.06:378,24,0
chr10	96872277	.	ATT	A	11261.42	PASS	AC=48;AF=0.923;AN=52;BaseQRankSum=0.654;DP=530;FS=6.169;HRun=2;HaplotypeScore=105.7722;InbreedingCoeff=0.8661;MQ=70.66;MQ0=11;MQRankSum=-2.179;QD=24.43;ReadPosRankSum=3.641;VQSLOD=3.6670;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:26,1:27:39.96:601,40,0	1/1:5,0:5:12.48:140,12,0	0/0:24,0:22:39:0,39,907	0/0:16,0:11:27.09:0,27,474	1/1:13,1:14:27.01:288,27,0	1/1:27,2:29:58.36:774,58,0	1/1:16,1:16:21.01:244,21,0	1/1:2,28:30:84.11:1152,84,0	./.	1/1:3,22:25:22.04:491,22,0	1/1:14,3:15:11.03:141,11,0	1/1:14,0:12:30.06:370,30,0	1/1:7,0:7:14.97:196,15,0	1/1:20,0:20:42.57:569,43,0	1/1:25,3:27:71.14:835,71,0	1/1:19,2:20:32.36:357,32,0	1/1:16,1:16:40.37:461,40,0	1/1:12,3:14:39.12:521,39,0	1/1:3,11:12:29.90:370,30,0	1/1:17,0:17:32.85:437,33,0	1/1:24,0:23:50.69:681,51,0	./.	1/1:17,2:19:45.07:541,45,0	1/1:2,26:27:2.61:49,3,0	1/1:13,1:13:16.24:175,16,0	1/1:17,2:19:55.28:588,55,0	1/1:18,2:19:44.94:581,45,0	1/1:20,0:20:54.09:699,54,0
chr10	96872535	.	C	CT	8397.69	PASS	AB=0.724;AC=42;AF=0.750;AN=56;BaseQRankSum=-4.274;DP=572;FS=4.554;HRun=11;HaplotypeScore=107.0811;InbreedingCoeff=0.4049;MQ=70.33;MQ0=0;MQRankSum=-3.680;QD=16.86;ReadPosRankSum=0.189;VQSLOD=4.9173;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:21:22.45:0,22,80	1/1:2,7:9:21.03:208,21,0	0/0:14,0:15:6.46:0,6,58	0/0:12,0:10:5.64:0,6,48	1/1:13,19:34:39.65:540,40,0	1/1:7,16:23:51.54:506,52,0	1/1:3,8:11:24.05:243,24,0	1/1:15,21:37:49.51:826,50,0	0/1:7,11:18:24.63:318,0,25	0/1:22,11:33:7.44:285,0,7	1/1:12,13:25:45.04:441,45,0	1/1:10,10:20:33.06:329,33,0	1/1:5,9:14:30.05:298,30,0	1/1:4,8:12:27.04:268,27,0	1/1:10,13:25:47.73:444,48,0	0/1:5,0:18:18.39:18,0,42	1/1:11,16:26:33.73:508,34,0	0/0:25,0:25:65.70:0,66,506	0/1:7,10:18:7.56:274,0,8	1/1:12,13:25:21.84:392,22,0	0/1:9,5:14:5.24:123,0,5	1/1:15,12:27:45.03:430,45,0	1/1:11,9:20:35.81:317,36,0	1/1:6,7:13:6.68:226,7,0	1/1:8,14:22:24.83:417,25,0	0/1:8,12:20:13.41:241,0,13	1/1:6,13:21:50.77:480,51,0	1/1:2,8:10:27.01:263,27,0
chr10	96872567	.	GA	G	10721.49	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.335;DP=553;FS=2.494;HRun=8;HaplotypeScore=95.3453;InbreedingCoeff=0.9554;MQ=67.84;MQ0=0;MQRankSum=-5.843;QD=20.31;ReadPosRankSum=3.249;VQSLOD=4.8235;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,15:20:36.04:347,36,0	1/1:0,8:8:24.04:231,24,0	0/0:8,0:10:11.67:0,12,175	0/0:14,0:13:13.78:0,14,171	1/1:5,22:27:47.99:448,48,0	1/1:3,23:26:63.08:602,63,0	1/1:2,9:11:18.02:174,18,0	1/1:9,25:34:75.04:704,75,0	1/1:3,19:22:54.08:520,54,0	1/1:1,27:27:75.12:724,75,0	1/1:2,18:20:36.04:347,36,0	1/1:4,15:19:36.05:347,36,0	1/1:4,8:12:24.03:231,24,0	1/1:4,9:13:24.03:231,24,0	1/1:6,15:21:45.04:429,45,0	1/1:5,20:25:57.08:550,57,0	1/1:9,19:28:42:390,42,0	1/1:2,20:22:57.09:550,57,0	1/1:4,19:23:57.08:546,57,0	1/1:2,17:19:39.05:376,39,0	1/1:4,12:16:21.03:203,21,0	1/1:3,22:25:51.06:492,51,0	1/1:4,18:21:42.06:405,42,0	1/1:2,11:13:18.03:174,18,0	1/1:3,15:18:36.05:347,36,0	1/1:2,27:29:78.10:747,78,0	1/1:3,15:18:42.05:405,42,0	1/1:1,8:9:21.02:201,21,0
chr10	96872643	.	C	CGTGTGTGTGT	15542.44	PASS	AB=0.854;AC=53;AF=0.946;AN=56;BaseQRankSum=-2.801;DP=660;FS=1.559;HRun=0;HaplotypeScore=227.7683;InbreedingCoeff=0.1815;MQ=59.08;MQ0=4;MQRankSum=-0.053;QD=23.55;ReadPosRankSum=1.358;VQSLOD=4.0605;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:37:27.03:454,27,0	1/1:8,3:12:13.40:383,13,0	0/1:35,0:22:14.17:14,0,103	0/1:35,0:25:10.35:10,0,95	1/1:24,2:26:17.99:307,18,0	1/1:18,2:23:15.03:460,15,0	1/1:7,4:19:3.01:150,3,0	1/1:23,0:23:36.58:738,37,0	1/1:12,3:16:18.01:732,18,0	1/1:26,2:27:46.93:1058,47,0	1/1:16,4:21:18.06:520,18,0	1/1:21,2:25:33.56:937,34,0	1/1:6,1:8:11.68:285,12,0	1/1:17,0:18:21.54:547,22,0	1/1:21,3:26:36.12:822,36,0	1/1:26,0:26:14.96:273,15,0	1/1:29,3:32:38.96:1002,39,0	1/1:22,0:23:39.08:861,39,0	1/1:15,0:15:21.05:436,21,0	1/1:15,2:17:8.75:187,9,0	1/1:35,0:35:29.72:436,30,0	1/1:14,5:19:21.05:641,21,0	0/1:5,11:23:0.12:0,0,0	1/1:24,2:28:23.90:504,24,0	1/1:15,2:17:24.07:486,24,0	1/1:24,1:25:33.57:746,34,0	1/1:17,6:24:45.11:1351,45,0	1/1:17,0:21:42.14:1205,42,0
chr10	96873243	.	CA	C	4291.72	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-1.675;DP=598;FS=3.747;HRun=9;HaplotypeScore=122.7588;InbreedingCoeff=0.9436;MQ=73.66;MQ0=4;MQRankSum=-3.085;QD=8.48;ReadPosRankSum=4.106;VQSLOD=2.9509;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:19:42.02:384,42,0	1/1:8,0:8:18.17:73,18,0	0/0:35,0:23:21.40:0,21,333	0/0:36,0:28:28.46:0,28,313	1/1:24,0:24:48.50:283,48,0	1/1:20,0:20:28.64:115,29,0	1/1:17,0:17:18.34:74,18,0	1/1:30,0:30:50.24:306,50,0	1/1:24,0:24:31.64:142,32,0	1/1:23,0:23:44.91:339,45,0	1/1:22,0:21:35.90:221,36,0	1/1:23,0:23:31.04:126,31,0	1/1:22,0:22:33.58:148,34,0	1/1:14,0:14:15.02:58,15,0	1/1:36,0:36:43.76:174,44,0	1/1:2,12:14:33.02:302,33,0	1/1:25,0:25:36.26:146,36,0	0/0:21,0:20:7.58:0,8,29	1/1:11,0:11:27.91:188,28,0	1/1:24,0:24:50.92:265,51,0	1/1:25,0:25:20.74:83,21,0	1/1:12,0:12:26.35:121,26,0	1/1:14,0:14:15.61:79,16,0	1/1:18,0:18:18.58:90,19,0	1/1:16,0:16:21.18:100,21,0	1/1:28,0:28:52.19:307,52,0	1/1:21,0:21:18.06:73,18,0	1/1:16,0:16:23.37:94,23,0
chr10	96873248	.	AAAAAG	A	15156.54	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-6.625;DP=571;FS=9.082;HRun=0;HaplotypeScore=112.5471;InbreedingCoeff=0.8029;MQ=71.89;MQ0=5;MQRankSum=-2.759;QD=31.06;ReadPosRankSum=2.359;VQSLOD=4.2555;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:64.82:65,0,391	1/1:1,7:8:21.07:411,21,0	0/0:34,0:21:20.12:0,20,385	0/0:30,0:22:23.59:0,24,308	1/1:1,21:22:56.85:883,57,0	1/1:1,21:22:33.11:646,33,0	1/1:1,16:17:21.07:410,21,0	1/1:4,26:30:78.01:1015,78,0	1/1:3,19:22:36.11:673,36,0	1/1:1,21:22:51.23:752,51,0	1/1:2,19:20:42.05:626,42,0	1/1:1,22:23:35.72:705,36,0	1/1:2,21:23:38.86:729,39,0	1/1:1,13:14:18.06:330,18,0	1/1:0,33:33:51.17:995,51,0	1/1:12,0:12:30.49:276,30,0	1/1:1,25:26:41.86:822,42,0	0/0:19,0:19:8.86:0,9,134	1/1:0,13:13:35.74:472,36,0	1/1:2,22:24:63.12:1074,63,0	1/1:1,22:23:30.02:510,30,0	1/1:2,10:12:33.07:595,33,0	1/1:1,11:12:17.75:321,18,0	1/1:0,16:16:21.07:400,21,0	1/1:0,15:15:24.08:458,24,0	1/1:2,23:25:66.07:1028,66,0	1/1:2,17:19:23.36:431,23,0	1/1:0,16:16:27.09:529,27,0
chr10	96873249	.	A	AAAGAAAGAAAG	1427.87	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-10.041;DP=563;FS=28.383;HRun=0;HaplotypeScore=210.5095;InbreedingCoeff=-0.0526;MQ=71.25;MQ0=6;MQRankSum=2.684;QD=5.80;ReadPosRankSum=-5.166;VQSLOD=-0.0122;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:99:110,0,422	0/0:7,0:7:21.07:0,21,480	0/0:33,0:20:19.84:0,20,351	0/0:28,0:21:12.98:0,13,292	0/1:21,0:21:99:110,0,730	0/0:23,0:22:29.20:0,29,718	0/0:17,0:17:1.93:0,2,176	0/1:29,0:29:99:155,0,456	0/0:21,0:21:5.72:0,6,689	0/1:22,0:22:99:205,0,535	0/1:21,0:20:99:100,0,478	0/0:23,0:23:31.55:0,32,798	0/0:23,0:23:6.05:0,6,634	0/0:14,0:14:18.06:0,18,441	0/0:33,0:33:51.13:0,51,1137	1/1:13,0:13:18.22:284,18,0	0/0:26,0:26:42.14:0,42,968	1/1:3,15:20:6.02:335,6,0	0/1:13,0:13:95.22:95,0,265	0/1:23,0:23:48.74:49,0,988	0/0:22,0:22:24.08:0,24,577	0/0:11,0:12:5.99:0,6,617	0/1:11,0:11:9.52:10,0,349	0/1:16,0:16:6.01:6,0,380	0/1:15,0:15:3.01:3,0,479	0/1:24,0:24:99:124,0,679	0/0:18,0:18:20.62:0,21,513	0/0:16,0:16:27.09:0,27,660
chr10	96873705	.	GCC	G	7288.47	PASS	AB=0.630;AC=43;AF=0.768;AN=56;BaseQRankSum=-7.444;DP=402;FS=4.841;HRun=11;HaplotypeScore=127.4323;InbreedingCoeff=0.8597;MQ=66.13;MQ0=1;MQRankSum=-1.440;QD=22.99;ReadPosRankSum=2.967;VQSLOD=3.9713;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:7,2:17:43.29:43,0,114	1/1:0,4:4:12.03:128,12,0	0/0:8,0:5:8.97:0,9,92	0/0:15,0:13:18.76:0,19,191	1/1:4,8:13:17.97:246,18,0	1/1:7,7:14:30.06:317,30,0	1/1:8,20:28:60.11:638,60,0	0/0:9,0:18:22.13:0,22,84	1/1:2,15:17:45.11:479,45,0	1/1:1,6:8:11.98:183,12,0	1/1:4,7:11:12:128,12,0	1/1:0,15:15:42.11:447,42,0	1/1:1,11:13:35.82:363,36,0	1/1:1,11:12:33.08:351,33,0	1/1:3,14:20:41.50:454,42,0	0/0:3,0:15:22.17:0,22,77	1/1:5,17:23:50.85:523,51,0	0/0:5,0:18:35.94:0,36,172	1/1:4,5:11:17.77:171,18,0	1/1:2,6:8:15.04:159,15,0	1/1:10,14:25:41.81:426,42,0	1/1:2,6:8:18.04:192,18,0	1/1:0,8:8:24.06:255,24,0	1/1:1,26:27:74.77:798,75,0	1/1:2,7:9:24.06:255,24,0	1/1:2,12:14:36.08:383,36,0	1/1:1,11:12:33.08:351,33,0	0/0:2,0:10:22.97:0,23,115
chr10	96876259	.	G	GA	220.64	PASS	AB=0.719;AC=1;AF=0.018;AN=56;BaseQRankSum=8.473;DP=612;FS=2.500;HRun=2;HaplotypeScore=83.8596;InbreedingCoeff=-0.0236;MQ=65.71;MQ0=1;MQRankSum=-6.523;QD=4.80;ReadPosRankSum=0.959;VQSLOD=0.7418;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,6:42:4.38:0,4,484	0/0:9,0:9:24.08:0,24,297	0/0:22,0:18:37.94:0,38,472	0/0:31,0:30:42.72:0,43,659	0/0:15,0:15:42.13:0,42,518	0/0:23,0:23:69.21:0,69,843	0/0:22,0:22:66.17:0,66,780	0/0:31,0:31:90.27:0,90,1095	0/0:23,0:23:69.20:0,69,833	0/0:28,0:28:78.22:0,78,939	0/0:14,0:14:39.12:0,39,483	0/0:28,0:28:84.25:0,84,1028	0/0:25,0:25:66.21:0,66,815	0/0:15,0:15:42.13:0,42,521	0/0:28,0:28:81.24:0,81,992	0/1:28,18:46:99:295,0,152	0/0:29,0:29:78.24:0,78,966	0/0:18,0:17:54.17:0,54,669	0/0:11,0:11:30.09:0,30,372	0/0:16,0:16:45.12:0,45,538	0/0:25,0:25:75.24:0,75,930	0/0:11,0:11:33.10:0,33,409	0/0:6,0:6:18.06:0,18,221	0/0:19,0:19:54.17:0,54,669	0/0:13,0:13:36.11:0,36,446	0/0:26,0:26:75.24:0,75,929	0/0:24,0:24:72.21:0,72,878	0/0:12,0:12:36.11:0,36,446
chr10	96876262	.	G	GAAGGAAGGAAA	5011.96	PASS	AB=0.875;AC=3;AF=0.054;AN=56;BaseQRankSum=8.621;DP=611;FS=2.628;HRun=0;HaplotypeScore=194.6149;InbreedingCoeff=0.6447;MQ=64.80;MQ0=1;MQRankSum=-6.817;QD=56.95;ReadPosRankSum=-0.458;VQSLOD=4.5876;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:36,6:42:99:1907,0,120	0/0:8,0:8:24.08:0,24,893	0/0:21,0:17:42.03:0,42,755	0/0:29,0:28:74.74:0,75,1530	0/0:16,0:16:48.07:0,48,1229	0/0:25,0:25:72.22:0,72,2236	0/0:22,0:22:66.19:0,66,1873	0/0:30,0:30:90.27:0,90,2335	0/0:23,0:23:69.18:0,69,2055	0/0:28,0:28:78.24:0,78,2178	0/0:13,0:13:39.13:0,39,1178	0/0:28,0:28:84.24:0,84,2647	0/0:24,0:24:72.18:0,72,2162	0/0:14,0:14:42.14:0,42,1408	0/0:28,0:28:84.27:0,84,2798	1/1:28,17:46:52.06:3105,52,0	0/0:27,0:27:78.27:0,78,2551	0/0:20,0:19:57.19:0,57,1609	0/0:14,0:14:39.07:0,39,959	0/0:17,0:17:48.09:0,48,1287	0/0:25,0:25:75.26:0,75,2638	0/0:11,0:11:33.11:0,33,1117	0/0:7,0:7:21.06:0,21,616	0/0:18,0:18:54.19:0,54,1795	0/0:13,0:13:39.12:0,39,1281	0/0:26,0:26:75.11:0,75,2214	0/0:24,0:24:72.19:0,72,2100	0/0:12,0:12:36.12:0,36,1120
chr10	96876723	.	TTTA	T	1426.77	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.044;DP=583;FS=5.736;HRun=0;HaplotypeScore=81.5959;InbreedingCoeff=0.9914;MQ=84.44;MQ0=0;MQRankSum=-4.532;QD=44.59;ReadPosRankSum=2.409;VQSLOD=4.9248;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:60.21:999,60,0	0/0:5,0:5:15.05:0,15,340	0/0:25,0:25:72.23:0,72,1532	0/0:16,0:16:45.15:0,45,900	0/0:30,0:30:81.28:0,81,1836	0/0:24,0:24:63.22:0,63,1405	0/0:23,0:23:66.23:0,66,1475	0/0:28,0:28:78.27:0,78,1768	0/0:26,0:26:75.26:0,75,1700	0/0:23,0:23:69.24:0,69,1564	0/0:24,0:24:69.24:0,69,1560	0/0:15,0:15:45.15:0,45,1019	0/0:18,0:18:48.16:0,48,1065	0/0:11,0:11:30.10:0,30,680	0/0:19,0:19:48.16:0,48,1077	1/1:1,11:12:33.11:550,33,0	0/0:31,0:31:90.31:0,90,2029	0/0:21,0:21:60.21:0,60,1336	0/0:25,0:25:75.26:0,75,1692	0/0:15,0:15:39.13:0,39,871	0/0:22,0:22:60.21:0,60,1359	0/0:25,0:25:69.24:0,69,1564	0/0:16,0:16:39.13:0,39,863	0/0:24,0:24:69.24:0,69,1522	0/0:29,0:29:84.29:0,84,1894	0/0:20,0:20:57.20:0,57,1292	0/0:23,0:23:66.23:0,66,1450	0/0:13,0:13:39.13:0,39,884
chr10	96876848	.	C	CCCTAATCTTCA	1489.91	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.981;DP=499;FS=0.000;HRun=0;HaplotypeScore=162.9652;InbreedingCoeff=0.9704;MQ=67.08;MQ0=3;MQRankSum=-3.975;QD=67.72;ReadPosRankSum=-0.995;VQSLOD=3.1197;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,6:12:15.05:867,15,0	0/0:8,0:8:24.08:0,24,894	0/0:14,0:7:14.20:0,14,344	0/0:15,0:7:17.73:0,18,434	0/0:17,0:17:41.87:0,42,1211	0/0:25,0:25:69.23:0,69,2465	0/0:20,0:20:60.19:0,60,2062	0/0:24,0:24:69.23:0,69,2312	0/0:13,0:13:36.12:0,36,1305	0/0:13,0:13:39.13:0,39,1253	0/0:10,0:10:27.09:0,27,944	0/0:12,0:12:30.10:0,30,1040	0/0:8,0:8:20.72:0,21,767	0/0:8,0:8:24.08:0,24,864	0/0:17,0:17:48.16:0,48,1766	1/1:7,2:9:24.04:740,24,0	0/0:36,0:36:99:0,102,3708	0/0:17,0:17:51.18:0,51,1858	0/0:22,0:23:66.19:0,66,2116	0/0:23,0:23:66.22:0,66,2171	0/0:33,0:33:96.29:0,96,3360	0/0:17,0:17:48.15:0,48,1664	0/0:17,0:17:45.12:0,45,1442	0/0:32,0:32:86.88:0,87,2973	0/0:21,0:21:54.17:0,54,1845	0/0:20,0:20:57.20:0,57,2037	0/0:26,0:26:75.24:0,75,2446	0/0:8,0:8:24.08:0,24,832
chr10	96876850	.	CT	C	322.86	PASS	AB=0.797;AC=7;AF=0.125;AN=56;BaseQRankSum=3.864;DP=521;FS=3.971;HRun=12;HaplotypeScore=68.5877;InbreedingCoeff=0.2433;MQ=61.61;MQ0=3;MQRankSum=0.501;QD=3.55;ReadPosRankSum=-1.573;VQSLOD=0.2019;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:11:21.16:0,21,108	0/0:8,0:8:18.03:0,18,178	0/1:11,1:4:13.22:13,0,15	0/1:11,0:5:10.03:18,0,10	0/0:13,0:17:27.03:0,27,227	0/0:22,2:25:19.32:0,19,525	0/0:18,1:22:33.41:0,33,458	1/1:9,13:24:12.43:260,12,0	0/0:14,0:14:30.02:0,30,283	0/0:12,0:13:23.88:0,24,227	0/1:9,1:11:2.36:2,0,146	0/0:11,0:12:25.12:0,25,225	0/0:9,0:9:21.86:0,22,187	0/0:13,0:13:21.01:0,21,199	0/0:19,0:19:40.31:0,40,390	0/0:10,0:10:15.59:0,16,80	0/0:36,1:38:78.69:0,79,919	0/0:20,0:20:44.99:0,45,420	0/0:20,0:22:23.62:0,24,406	0/0:24,1:26:45.68:0,46,605	0/0:29,1:35:60.26:0,60,728	0/0:17,0:17:42.03:0,42,403	0/0:15,1:17:28.16:0,28,255	0/0:27,0:31:77.75:0,78,727	0/0:18,0:22:44.93:0,45,441	0/1:15,5:21:54.34:54,0,345	0/0:25,2:28:16.48:0,16,473	0/1:2,5:8:10.46:102,0,10
chr10	96878535	.	TACACACAC	T	135.53	PASS	AB=0.724;AC=1;AF=0.018;AN=56;BaseQRankSum=2.428;DP=453;FS=2.070;HRun=0;HaplotypeScore=108.1612;InbreedingCoeff=-0.0010;MQ=67.21;MQ0=4;MQRankSum=-2.620;QD=6.45;ReadPosRankSum=1.294;VQSLOD=2.2513;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:6.91:0,7,226	0/0:3,0:3:3.01:0,3,123	0/0:23,0:14:2.84:0,3,9	0/0:26,0:22:3.01:0,3,42	0/0:16,0:16:18.06:0,18,648	0/0:13,0:16:21.05:0,21,625	0/0:14,0:14:15.03:0,15,493	0/0:19,0:19:12.04:0,12,367	0/0:14,0:15:25.44:0,25,788	0/0:18,0:16:30.10:0,30,906	0/0:9,0:9:18.06:0,18,623	0/0:11,0:11:18.06:0,18,693	0/0:5,0:5:6.02:0,6,209	0/0:10,0:10:18.06:0,18,650	0/0:16,0:17:27.09:0,27,964	0/0:16,0:15:15.60:0,16,460	0/0:22,0:23:51.07:0,51,1693	0/1:13,8:21:82.81:210,0,83	0/0:12,0:12:6.91:0,7,248	0/0:9,0:9:15.05:0,15,513	0/0:26,0:26:27.09:0,27,978	0/0:6,0:6:9.03:0,9,360	0/0:12,0:13:23.81:0,24,859	0/0:23,0:22:27.05:0,27,911	0/0:13,0:12:30.10:0,30,1173	0/0:24,0:24:43.02:0,43,1326	0/0:15,0:16:30.10:0,30,1058	0/0:17,0:18:37.92:0,38,1346
chr10	96878666	.	C	CT	845.03	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=4.582;DP=442;FS=4.146;HRun=12;HaplotypeScore=55.5760;InbreedingCoeff=0.8542;MQ=69.42;MQ0=2;MQRankSum=-5.399;QD=6.65;ReadPosRankSum=-1.987;VQSLOD=1.5142;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:18:19.14:91,19,0	0/0:11,0:11:26.77:0,27,190	0/0:15,0:10:6.31:0,6,46	0/1:24,0:14:3.78:4,0,55	0/0:15,1:17:11.65:0,12,237	0/0:12,0:13:27.21:0,27,173	0/0:7,0:7:12.38:0,12,105	1/1:6,1:23:44.19:258,44,0	0/0:9,0:8:20.86:0,21,151	0/0:18,0:18:43.78:0,44,312	0/0:13,0:14:31.83:0,32,224	0/0:16,0:16:44.69:0,45,325	0/0:6,0:6:11.91:0,12,86	0/0:12,0:12:23.82:0,24,172	0/0:16,0:16:41.73:0,42,303	1/1:20,0:19:32.13:156,32,0	0/0:28,1:28:33.30:0,33,400	1/1:3,22:25:44.96:438,45,0	0/0:19,0:18:22.65:0,23,158	0/0:12,0:12:21.10:0,21,169	0/0:9,0:9:17.86:0,18,131	0/0:3,0:3:8.95:0,9,66	0/0:14,0:14:23.84:0,24,175	0/0:7,0:8:16.95:0,17,115	0/0:18,0:19:46.62:0,47,326	0/0:23,0:23:50.65:0,51,372	0/0:22,2:24:53.37:0,53,377	1/1:5,1:16:14.20:71,14,0
chr10	96878678	.	T	TTTA	1134.03	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=4.805;DP=421;FS=3.047;HRun=0;HaplotypeScore=65.7573;InbreedingCoeff=0.4585;MQ=67.21;MQ0=2;MQRankSum=-4.632;QD=11.94;ReadPosRankSum=-0.217;VQSLOD=3.1449;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:18:24.08:426,24,0	0/0:9,0:9:27.06:0,27,368	0/0:14,0:9:0.65:0,1,69	0/1:21,0:11:51.36:51,0,113	0/0:18,0:18:47.60:0,48,613	0/0:15,0:15:45.01:0,45,511	0/0:6,0:6:18.02:0,18,247	0/1:25,0:25:70.36:70,0,228	0/0:9,0:8:24.01:0,24,336	0/0:20,0:19:57.15:0,57,772	0/0:14,0:14:42.09:0,42,549	0/0:18,0:18:54.14:0,54,741	0/0:7,0:7:20.98:0,21,247	0/0:10,0:10:30.08:0,30,410	0/0:17,0:17:48.13:0,48,656	1/1:1,14:16:33.11:718,33,0	0/0:26,0:26:74.77:0,75,1007	0/0:22,0:22:38.29:0,38,141	0/0:17,0:15:38.75:0,39,472	0/0:10,0:10:23:0,23,343	0/0:8,0:8:18.02:0,18,265	0/0:3,0:3:9.03:0,9,137	0/0:13,0:13:36.01:0,36,456	0/0:6,0:6:18.06:0,18,257	0/0:18,0:18:51.11:0,51,709	0/0:24,0:24:69.14:0,69,909	0/0:22,0:22:66.15:0,66,891	0/1:12,0:12:8.57:9,0,57
chr10	96879448	.	GGTGT	G	1399.04	PASS	AB=0.775;AC=12;AF=0.231;AN=52;BaseQRankSum=3.066;DP=694;FS=2.217;HRun=0;HaplotypeScore=135.0772;InbreedingCoeff=0.6238;MQ=63.54;MQ0=22;MQRankSum=0.722;QD=7.25;ReadPosRankSum=1.398;VQSLOD=2.8253;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:2.34:0,2,16	0/0:9,0:9:9.03:0,9,131	./.	./.	0/1:16,0:20:23.59:24,0,312	0/0:16,0:16:14.77:0,15,223	0/0:25,0:28:39.13:0,39,782	0/0:39,0:35:25.12:0,25,262	0/0:16,0:17:31.33:0,31,595	0/0:21,0:21:15.05:0,15,255	0/0:18,0:21:17.80:0,18,321	0/0:25,0:27:32.57:0,33,550	0/0:9,0:14:26.30:0,26,425	0/0:17,0:17:30.09:0,30,624	0/0:21,0:23:33.76:0,34,707	0/0:23,0:23:1.18:0,1,42	1/1:19,16:36:36.11:546,36,0	0/0:20,0:19:19.21:0,19,199	1/1:30,0:31:8.20:92,8,0	1/1:15,11:27:26.78:404,27,0	1/1:28,9:36:2.49:9,2,0	0/0:21,0:22:23.78:0,24,393	0/0:15,0:19:41.86:0,42,695	0/0:11,0:24:33.11:0,33,584	0/0:17,0:20:21.06:0,21,432	0/1:17,8:26:7.39:314,0,7	1/1:6,7:14:12.03:169,12,0	0/0:5,0:5:1.72:0,2,4
chr10	96879939	.	A	AC	1803.85	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.512;DP=560;FS=4.701;HRun=0;HaplotypeScore=61.8111;InbreedingCoeff=0.9772;MQ=70.62;MQ0=0;MQRankSum=1.075;QD=37.58;ReadPosRankSum=1.689;VQSLOD=3.9319;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:63.21:1007,63,0	0/0:10,0:10:30.10:0,30,419	0/0:14,0:14:34.36:0,34,464	0/0:10,0:11:17.74:0,18,395	0/0:41,0:41:99:0,120,1660	0/0:15,0:14:45.15:0,45,630	0/0:16,0:16:48.16:0,48,671	0/0:45,0:45:99:0,132,1833	0/0:17,0:17:51.17:0,51,713	0/0:24,0:24:72.24:0,72,1007	0/0:19,0:19:57.16:0,57,776	0/0:17,0:17:48.16:0,48,670	0/0:23,0:23:69.23:0,69,965	0/0:12,0:12:36.12:0,36,503	0/0:24,0:24:72.24:0,72,1006	1/1:1,23:24:21.24:917,21,0	0/0:26,0:26:75.24:0,75,1029	0/0:21,0:21:63.21:0,63,881	0/0:22,0:22:66.22:0,66,922	0/0:21,0:21:63.21:0,63,881	0/0:12,0:12:36.12:0,36,502	0/0:5,0:5:12.03:0,12,151	0/0:11,0:11:33.11:0,33,462	0/0:11,0:11:33.07:0,33,440	0/0:15,0:15:39.12:0,39,529	0/0:26,0:26:78.22:0,78,1055	0/0:35,0:35:98.87:0,99,1383	0/0:19,0:19:54.18:0,54,752
chr10	96880069	.	CA	C	1384.56	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.980;DP=486;FS=1.474;HRun=1;HaplotypeScore=48.2179;InbreedingCoeff=0.9648;MQ=65.80;MQ0=0;MQRankSum=-2.825;QD=34.61;ReadPosRankSum=2.456;VQSLOD=3.5157;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:22:63.21:877,63,0	0/0:6,0:6:18.06:0,18,284	0/0:10,0:10:30.10:0,30,468	0/0:21,0:21:63.21:0,63,963	0/0:21,0:21:63.20:0,63,981	0/0:15,0:15:36.12:0,36,575	0/0:10,0:10:30.10:0,30,472	0/0:37,0:37:99:0,111,1733	0/0:11,0:11:30.10:0,30,480	0/0:13,0:13:36.12:0,36,574	0/0:12,0:12:33.11:0,33,527	0/0:13,0:13:36.12:0,36,575	0/0:15,0:15:42.14:0,42,664	0/0:8,0:8:24.08:0,24,382	0/0:14,0:14:39.13:0,39,624	1/1:0,17:17:45.15:629,45,0	0/0:28,0:28:78.27:0,78,1245	0/0:17,0:17:48.14:0,48,740	0/0:22,0:22:66.23:0,66,1056	0/0:30,0:30:87.30:0,87,1383	0/0:19,0:19:57.19:0,57,910	0/0:3,0:3:9.03:0,9,144	0/0:24,0:24:72.23:0,72,1118	0/0:20,0:20:60.19:0,60,933	0/0:13,0:13:39.13:0,39,616	0/0:24,0:24:72.25:0,72,1146	0/0:24,0:24:60.20:0,60,959	0/0:16,0:16:45.14:0,45,695
chr10	96880146	.	C	CT	374.90	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-3.259;DP=437;FS=3.216;HRun=10;HaplotypeScore=53.0715;InbreedingCoeff=0.5580;MQ=68.13;MQ0=3;MQRankSum=0.384;QD=12.93;ReadPosRankSum=-0.238;VQSLOD=3.2216;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:47.91:0,48,390	0/0:5,0:5:11.99:0,12,99	0/1:10,0:8:17.34:17,0,55	0/0:7,0:6:11.94:0,12,92	0/0:15,0:15:41.89:0,42,335	0/0:20,0:21:47.91:0,48,391	0/0:13,0:13:32.93:0,33,266	0/0:31,0:31:50.77:0,51,404	0/0:12,0:12:29.93:0,30,241	0/0:14,0:14:38.94:0,39,320	0/0:13,0:13:32.84:0,33,262	0/0:13,0:13:23.95:0,24,194	0/0:8,0:8:17.96:0,18,146	0/0:11,0:11:29.94:0,30,241	0/0:14,0:14:32.93:0,33,269	0/0:15,0:16:35.96:0,36,295	0/0:31,0:31:80.90:0,81,665	1/1:2,17:19:44.98:463,45,0	0/0:19,0:18:35.93:0,36,295	0/0:28,0:28:68.41:0,68,563	0/0:12,0:12:20.93:0,21,172	0/0:4,0:4:8.99:0,9,74	0/0:7,0:7:11.97:0,12,99	0/0:3,0:3:8.97:0,9,70	0/0:14,0:14:38.96:0,39,320	0/0:26,0:26:64.82:0,65,513	0/0:30,0:30:68.61:0,69,547	0/0:13,0:13:31.52:0,32,251
chr10	96880289	.	AGCAGTCAGT	A	181.94	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=2.949;DP=455;FS=11.040;HRun=0;HaplotypeScore=91.4621;InbreedingCoeff=0.7292;MQ=44.34;MQ0=48;MQRankSum=-2.554;QD=20.22;ReadPosRankSum=0.282;VQSLOD=1.8908;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,4:3:6.02:186,6,0	0/0:9,0:9:24.08:0,24,1176	./.	0/0:4,0:1:3.01:0,3,85	0/0:23,0:23:48.16:0,48,2189	0/0:20,0:17:30.10:0,30,1451	0/0:23,0:15:42.14:0,42,2017	0/0:32,0:8:15.05:0,15,650	0/0:18,0:17:39.13:0,39,1910	0/0:24,0:23:66.23:0,66,3207	0/0:11,0:11:30.10:0,30,1458	0/0:19,0:15:33.11:0,33,1593	0/0:10,0:10:21.07:0,21,1029	0/0:6,0:6:15.05:0,15,735	0/0:11,0:11:27.09:0,27,1323	1/1:0,4:4:3.01:93,3,0	0/0:20,0:19:39.13:0,39,1910	0/0:26,0:21:39.13:0,39,1895	0/0:25,0:12:33.04:0,33,1356	0/0:21,0:21:48.16:0,48,2343	0/0:23,0:19:48.16:0,48,2350	0/0:5,0:5:15.05:0,15,736	0/0:14,0:13:30.10:0,30,1450	0/0:22,0:19:51.18:0,51,2500	0/0:16,0:16:33.11:0,33,1617	0/0:29,0:28:81.28:0,81,3705	0/0:21,0:19:45.15:0,45,2204	0/0:14,0:11:21.07:0,21,1030
chr10	96880343	.	TTTTG	T	111.48	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.050;DP=546;FS=6.145;HRun=0;HaplotypeScore=81.9722;InbreedingCoeff=0.6938;MQ=60.65;MQ0=6;MQRankSum=-1.967;QD=22.30;ReadPosRankSum=-0.393;VQSLOD=2.5876;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:3.01:0,3,34	0/0:11,0:11:24.08:0,24,561	0/0:23,0:9:14.88:0,15,295	0/0:33,0:21:5.85:0,6,434	0/0:23,0:23:51.17:0,51,1146	0/0:10,0:10:8.49:0,8,285	0/0:19,0:19:36.11:0,36,750	0/0:37,0:36:69.22:0,69,1511	0/0:18,0:18:42.13:0,42,916	0/0:24,0:24:51.18:0,51,1208	0/0:20,0:20:51.18:0,51,1197	0/0:12,0:12:27.09:0,27,650	0/0:12,0:12:24.07:0,24,462	0/0:16,0:16:39.13:0,39,890	0/0:15,0:15:27.09:0,27,620	1/1:0,5:5:12.04:197,12,0	0/0:31,0:31:66.23:0,66,1526	0/0:22,0:22:42.06:0,42,900	0/0:32,0:28:39.13:0,39,946	0/0:14,0:14:36.11:0,36,770	0/0:26,0:26:57.20:0,57,1336	0/0:10,0:10:21.07:0,21,464	0/0:17,0:17:33.05:0,33,628	0/0:35,0:35:93.32:0,93,2118	0/0:17,0:17:39.13:0,39,841	0/0:24,0:24:54.16:0,54,1134	0/0:25,0:25:57.18:0,57,1200	0/0:12,0:12:33.11:0,33,783
chr10	96880869	.	C	CT	695.73	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=5.508;DP=414;FS=13.174;HRun=11;HaplotypeScore=74.9863;InbreedingCoeff=0.6126;MQ=75.19;MQ0=7;MQRankSum=-0.498;QD=4.70;ReadPosRankSum=-3.245;VQSLOD=-0.2750;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:13.41:64,13,0	0/0:7,0:7:17.42:0,17,117	0/1:36,0:12:22.77:23,0,23	0/1:28,0:16:12.08:12,0,32	0/0:11,0:11:17.97:0,18,122	0/0:11,0:11:16.22:0,16,119	0/0:16,0:16:35.77:0,36,268	1/1:10,19:29:34.72:514,35,0	0/0:16,0:16:20.83:0,21,147	0/0:17,0:17:21:0,21,148	0/0:12,0:12:12.79:0,13,133	0/0:16,0:16:20.50:0,20,170	0/0:10,0:10:16.67:0,17,114	0/0:8,0:8:11.64:0,12,88	0/0:9,0:9:20.85:0,21,154	1/1:22,0:22:20.62:99,21,0	0/0:17,0:17:32.93:0,33,210	0/1:10,0:11:1.49:12,0,1	0/0:23,1:24:24.19:0,24,324	0/0:12,0:13:22.89:0,23,168	0/0:6,0:6:10.77:0,11,75	0/0:6,0:6:8.63:0,9,55	0/0:12,0:12:14.42:0,14,97	0/0:8,0:8:11.93:0,12,93	0/0:7,0:9:1.86:0,2,25	0/0:20,0:20:5.07:0,5,203	0/0:15,0:18:29.86:0,30,191	1/1:5,6:11:14.95:139,15,0
chr10	96880883	.	T	TTA	198.34	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.523;DP=439;FS=12.836;HRun=0;HaplotypeScore=76.1154;InbreedingCoeff=0.7768;MQ=70.24;MQ0=9;MQRankSum=-0.548;QD=9.92;ReadPosRankSum=0.131;VQSLOD=2.0308;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:20.58:0,21,127	0/0:7,0:7:21.02:0,21,257	0/0:48,0:13:32.34:0,32,237	0/0:34,0:15:4.23:0,4,40	0/0:11,0:11:29.98:0,30,345	0/0:14,0:14:35.39:0,35,347	0/0:16,0:16:48.02:0,48,614	0/0:27,0:27:79.30:0,79,795	0/0:14,0:14:36.05:0,36,411	0/0:12,0:12:35.99:0,36,431	0/0:12,0:12:28.84:0,29,354	0/0:16,0:16:45.08:0,45,488	0/0:13,0:13:39.03:0,39,404	0/0:7,0:7:20.94:0,21,191	0/0:10,0:10:30.06:0,30,342	0/0:17,0:17:34.24:0,34,278	0/0:18,0:18:47.32:0,47,558	1/1:7,11:19:8.94:281,9,0	0/0:27,0:27:73.96:0,74,858	0/0:17,0:17:50.68:0,51,599	0/0:8,0:8:24.03:0,24,271	0/0:5,0:5:14.93:0,15,179	0/0:13,0:13:39.02:0,39,481	0/0:7,0:7:18.04:0,18,235	0/0:8,0:8:20.98:0,21,250	0/0:22,0:22:62.43:0,62,670	0/0:19,0:19:48.01:0,48,610	0/0:9,0:9:21.03:0,21,266
chr10	96880916	.	CAGATCAATGCAA	C	793.56	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.351;DP=327;FS=2.820;HRun=0;HaplotypeScore=109.0064;InbreedingCoeff=0.8000;MQ=83.67;MQ0=1;MQRankSum=-3.471;QD=46.68;ReadPosRankSum=0.393;VQSLOD=3.4488;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,7:10:6.91:227,7,0	0/0:6,0:6:18.06:0,18,1089	0/0:16,0:12:26.68:0,27,1384	0/0:17,0:10:2.18:0,2,780	0/0:8,0:8:24.08:0,24,1457	0/0:9,0:9:27.09:0,27,1648	0/0:19,0:19:57.20:0,57,3055	0/0:26,0:26:72.25:0,72,3985	0/0:13,0:13:36.12:0,36,2218	0/0:11,0:11:30.10:0,30,1804	0/0:3,0:3:9.03:0,9,555	0/0:12,0:12:36.12:0,36,2182	0/0:12,0:12:36.12:0,36,2093	0/0:6,0:6:18.06:0,18,1110	0/0:10,0:10:30.10:0,30,1849	1/1:0,7:7:18.06:676,18,0	0/0:13,0:13:39.13:0,39,2182	0/0:18,0:18:32.76:0,33,1865	0/0:20,0:20:60.21:0,60,3042	0/0:15,0:15:39.13:0,39,2158	0/0:8,0:8:24.08:0,24,1474	0/0:5,0:5:15.05:0,15,816	0/0:10,0:10:30.10:0,30,1790	0/0:4,0:4:12:0,12,561	0/0:8,0:8:24.08:0,24,1355	0/0:11,0:11:27.09:0,27,1503	0/0:20,0:20:54.15:0,54,3004	0/0:9,0:9:24.08:0,24,1462
chr10	96881733	.	G	GATAA	3603.43	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.206;DP=546;FS=3.525;HRun=0;HaplotypeScore=85.4978;InbreedingCoeff=0.9864;MQ=85.12;MQ0=0;MQRankSum=-2.940;QD=59.07;ReadPosRankSum=3.314;VQSLOD=5.0926;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,34:40:90.27:2278,90,0	0/0:6,0:6:18.06:0,18,323	0/0:21,0:21:48.16:0,48,818	0/0:13,0:13:30.10:0,30,511	0/0:15,0:15:42.13:0,42,725	0/0:12,0:11:36.09:0,36,587	0/0:20,0:20:57.17:0,57,966	0/0:23,0:23:63.21:0,63,1098	0/0:18,0:18:48.14:0,48,804	0/0:22,0:22:63.21:0,63,1107	0/0:6,0:6:15.05:0,15,269	0/0:29,0:29:84.28:0,84,1481	0/0:18,0:18:45.15:0,45,807	0/0:17,0:17:51.17:0,51,916	0/0:19,0:18:54.17:0,54,941	1/1:2,18:21:51.18:1325,51,0	0/0:29,0:29:81.28:0,81,1455	0/0:27,0:27:69.20:0,69,1178	0/0:18,0:18:45.12:0,45,720	0/0:14,0:14:39.12:0,39,672	0/0:33,0:33:90.31:0,90,1617	0/0:16,0:16:42.14:0,42,744	0/0:15,0:15:45.14:0,45,779	0/0:28,0:28:72.23:0,72,1265	0/0:21,0:21:51.13:0,51,854	0/0:24,0:24:60.20:0,60,1078	0/0:10,0:10:27.09:0,27,479	0/0:11,0:11:26.99:0,27,331
chr10	96883785	.	C	CT	1488.28	PASS	AB=0.901;AC=13;AF=0.232;AN=56;BaseQRankSum=-7.998;DP=434;FS=3.104;HRun=12;HaplotypeScore=47.4468;InbreedingCoeff=0.5567;MQ=61.30;MQ0=4;MQRankSum=-2.078;QD=10.63;ReadPosRankSum=-1.448;VQSLOD=2.3265;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:24:29.08:425,29,0	0/0:8,0:9:22.91:0,23,159	0/1:7,0:5:11.68:12,0,41	0/1:5,0:5:0:0,0,0	0/0:23,0:26:57.68:0,58,402	0/0:15,0:15:35.75:0,36,263	0/0:12,0:12:3.33:0,3,131	0/1:14,16:28:11.22:370,0,11	0/1:10,1:13:1.23:1,0,137	0/0:25,0:25:53.65:0,54,393	0/0:15,0:17:33.67:0,34,217	0/0:12,0:12:32.78:0,33,239	0/0:16,0:16:35.74:0,36,260	0/0:5,0:5:14.91:0,15,109	0/1:11,1:12:2.34:2,0,148	1/1:1,8:9:24.04:234,24,0	0/0:22,0:24:51.72:0,52,358	1/1:6,15:21:26.12:406,26,0	0/0:15,0:15:35.74:0,36,258	0/0:25,0:26:46.66:0,47,331	0/0:9,0:9:17.89:0,18,131	0/0:7,0:7:5.94:0,6,44	0/0:7,0:7:8.90:0,9,66	0/0:13,0:13:29.77:0,30,218	0/0:18,0:18:53.13:0,53,375	0/0:19,0:19:44.72:0,45,328	0/0:18,0:18:44.63:0,45,322	1/1:6,12:17:4.97:197,5,0
chr10	96887412	.	G	GC	628.47	PASS	AB=0.548;AC=9;AF=0.161;AN=56;BaseQRankSum=0.837;DP=412;FS=9.396;HRun=0;HaplotypeScore=51.0984;InbreedingCoeff=0.8149;MQ=68.24;MQ0=4;MQRankSum=-0.990;QD=10.30;ReadPosRankSum=1.444;VQSLOD=2.8068;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,4:23:41.86:344,42,0	0/0:8,0:8:14.66:0,15,101	0/0:31,0:18:25.50:0,26,300	0/0:26,0:11:28.94:0,29,264	0/0:7,0:7:14.97:0,15,122	0/0:19,0:17:41.91:0,42,336	0/0:24,0:24:65.58:0,66,546	1/1:6,0:6:14.97:124,15,0	0/0:9,0:10:17.92:0,18,139	0/0:11,0:12:17.20:0,17,141	0/0:7,0:7:17.94:0,18,144	0/0:17,0:17:41.91:0,42,345	0/0:14,0:14:14.02:0,14,134	0/0:19,0:19:41.90:0,42,353	0/0:21,0:21:53.98:0,54,479	0/1:3,13:17:4.49:100,0,4	0/0:22,0:22:56.41:0,56,476	1/1:12,1:13:18.02:178,18,0	0/0:8,0:9:14.98:0,15,142	0/0:6,0:6:11.98:0,12,108	0/0:20,0:20:50.39:0,50,398	0/0:13,0:12:23.31:0,23,179	0/0:6,0:6:14.86:0,15,111	0/0:21,0:20:51.18:0,51,399	0/0:9,0:10:18.86:0,19,148	0/0:13,0:14:20.99:0,21,185	0/0:15,0:15:41.87:0,42,331	1/1:2,0:2:3.01:36,3,0
chr10	96888173	.	T	TG	5521.59	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-15.723;DP=673;FS=2.686;HRun=0;HaplotypeScore=60.7509;InbreedingCoeff=0.9954;MQ=81.94;MQ0=0;MQRankSum=-2.917;QD=43.82;ReadPosRankSum=0.237;VQSLOD=5.2094;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,45:46:99:2110,132,0	0/0:19,0:19:57.19:0,57,796	0/0:22,0:22:66.14:0,66,867	0/0:14,0:14:38.27:0,38,443	0/0:32,0:32:93.24:0,93,1232	0/0:22,0:22:66.22:0,66,923	0/0:23,0:23:69.20:0,69,944	1/1:3,34:37:99:1583,102,0	0/0:21,0:21:63.21:0,63,881	0/0:32,0:32:96.31:0,96,1313	0/0:28,0:28:81.27:0,81,1119	0/0:13,0:13:39.13:0,39,545	0/0:19,0:19:57.19:0,57,797	0/0:23,0:23:69.20:0,69,931	0/0:29,0:29:87.28:0,87,1202	1/1:2,20:22:15.22:821,15,0	0/0:19,0:19:57.19:0,57,796	1/1:0,14:14:42.14:671,42,0	0/0:29,0:29:84.26:0,84,1155	0/0:23,0:23:69.23:0,69,965	0/0:29,0:29:87.28:0,87,1198	0/0:29,0:29:87.28:0,87,1201	0/0:25,0:25:75.25:0,75,1048	0/0:16,0:16:45.15:0,45,629	0/0:21,0:21:63.19:0,63,848	0/0:26,0:26:78.26:0,78,1091	0/0:33,0:33:99:0,99,1361	1/1:0,7:7:21.07:336,21,0
chr10	96889398	.	AACACACACACATAC	A	2754.75	PASS	AB=0.963;AC=5;AF=0.089;AN=56;BaseQRankSum=7.881;DP=624;FS=5.165;HRun=0;HaplotypeScore=229.9120;InbreedingCoeff=0.7776;MQ=68.24;MQ0=3;MQRankSum=-8.319;QD=47.50;ReadPosRankSum=0.704;VQSLOD=2.9449;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:48.08:1815,48,0	0/0:9,0:9:24.08:0,24,1653	0/0:18,0:8:24.08:0,24,954	0/0:27,0:18:44.74:0,45,1583	0/0:26,0:26:78.27:0,78,5172	0/0:30,0:30:78.27:0,78,5369	0/0:26,0:26:78.27:0,78,5250	0/0:31,0:31:87.29:0,87,5415	0/0:14,0:14:42.13:0,42,2767	0/0:36,0:36:99:0,99,6311	0/0:25,0:25:69.22:0,69,4139	0/0:28,0:28:78.27:0,78,5265	0/0:13,0:13:33.11:0,33,2202	0/0:24,0:24:66.21:0,66,4299	0/1:25,1:26:54.58:55,0,4577	1/1:2,10:12:24.08:1014,24,0	0/0:24,0:24:72.25:0,72,4721	0/0:12,0:12:30.10:0,30,1971	0/0:26,0:26:75.24:0,75,4462	0/0:29,0:29:87.30:0,87,5883	0/0:18,0:18:51.16:0,51,3120	0/0:12,0:12:36.12:0,36,2407	0/0:21,0:21:63.22:0,63,4270	0/0:23,0:23:66.23:0,66,4613	0/0:17,0:17:51.18:0,51,3466	0/0:31,0:31:93.31:0,93,6305	0/0:33,0:33:99:0,99,6762	0/0:13,0:13:36.12:0,36,2348
chr10	96890260	.	GAT	G	263.12	PASS	AB=0.921;AC=9;AF=0.173;AN=52;BaseQRankSum=4.986;DP=262;FS=0.000;HRun=0;HaplotypeScore=38.9869;InbreedingCoeff=-0.0070;MQ=89.96;MQ0=0;MQRankSum=-0.705;QD=2.55;ReadPosRankSum=0.202;VQSLOD=1.1563;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:12.39:0,12,449	./.	0/0:8,0:7:3.01:0,3,42	0/0:19,0:15:1.38:0,1,4	0/0:6,0:6:12.02:0,12,167	0/0:15,0:15:42.08:0,42,577	./.	0/1:32,0:32:6.12:6,0,340	0/0:7,0:7:18.06:0,18,287	0/1:5,0:6:6.44:6,0,79	0/0:6,0:6:6.01:0,6,73	0/0:9,0:9:9.02:0,9,189	0/0:8,0:8:9.03:0,9,143	0/1:3,0:3:17.42:17,0,87	0/0:2,0:2:3:0,3,25	0/0:7,0:7:12.03:0,12,169	0/1:14,4:18:34.12:34,0,485	1/1:18,0:18:34.20:173,34,0	0/1:12,5:17:99:128,0,193	0/1:6,0:6:9.57:10,0,177	0/0:4,0:4:3.01:0,3,48	0/0:5,0:5:6.01:0,6,73	0/0:5,0:5:6.01:0,6,73	0/0:6,0:6:3.01:0,3,48	0/0:9,0:9:21.05:0,21,294	0/0:15,0:15:24.14:0,24,478	0/0:9,0:9:15.02:0,15,213	0/1:3,0:3:9.88:20,0,10
chr10	96890272	.	TATATA	T	733.66	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=3.519;DP=234;FS=1.098;HRun=0;HaplotypeScore=46.6628;InbreedingCoeff=0.3765;MQ=79.51;MQ0=2;MQRankSum=-2.698;QD=40.76;ReadPosRankSum=2.207;VQSLOD=3.4287;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.13:0,42,1129	0/0:2,0:2:5.99:0,6,49	0/0:4,0:3:5.99:0,6,105	0/0:15,0:10:19.87:0,20,166	0/0:6,0:6:18.03:0,18,399	0/0:15,0:15:41.67:0,42,1259	0/0:3,0:3:5.14:0,5,63	0/0:32,0:30:84.06:0,84,1784	0/0:9,0:9:27.09:0,27,744	0/1:3,0:3:1.57:2,0,173	0/0:4,0:4:9.03:0,9,243	0/0:10,0:10:30.05:0,30,644	0/0:6,0:6:18.02:0,18,349	0/0:5,0:5:15:0,15,257	0/0:2,0:2:6.02:0,6,123	0/0:6,0:6:18.03:0,18,402	0/0:21,0:21:57.13:0,57,1299	1/1:0,15:15:36.12:827,36,0	0/0:15,0:15:45.09:0,45,829	0/0:6,0:6:18.03:0,18,421	0/0:1,0:1:3.01:0,3,93	0/0:2,0:2:6.02:0,6,167	0/0:4,0:4:12.01:0,12,216	0/0:2,0:2:5.98:0,6,113	0/0:9,0:9:24.06:0,24,636	0/0:14,0:14:42.13:0,42,1126	0/0:6,0:6:18.04:0,18,464	0/0:2,0:2:5.75:0,6,82
chr10	96890277	.	AT	A	520.89	PASS	AB=0.800;AC=5;AF=0.093;AN=54;BaseQRankSum=4.619;DP=238;FS=13.997;HRun=10;HaplotypeScore=29.6935;InbreedingCoeff=0.4554;MQ=73.78;MQ0=2;MQRankSum=1.036;QD=14.08;ReadPosRankSum=-0.980;VQSLOD=1.4195;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:36.08:0,36,388	0/0:2,0:2:6.02:0,6,65	0/0:3,0:2:2.90:0,3,16	0/0:12,0:7:7.71:0,8,48	0/0:6,0:6:15.04:0,15,165	0/0:14,1:15:10.16:0,10,339	0/1:3,1:4:13.91:14,0,86	1/1:8,23:29:71.54:583,72,0	0/0:10,0:10:30.05:0,30,313	0/0:4,0:4:7.81:0,8,60	0/0:4,0:4:6:0,6,57	0/0:10,0:11:23.18:0,23,283	0/0:8,0:8:24.06:0,24,263	0/0:5,0:5:12.02:0,12,124	./.	0/0:7,0:7:18.05:0,18,198	0/0:20,0:20:51.67:0,52,516	0/0:15,0:15:21.55:0,22,71	0/0:15,0:15:29.41:0,29,262	0/0:6,0:6:18.05:0,18,198	0/0:2,0:2:6.02:0,6,66	0/0:2,0:2:3.01:0,3,33	0/0:4,0:4:9.02:0,9,99	0/0:2,0:2:6.02:0,6,66	0/0:10,0:10:24.06:0,24,265	0/0:14,0:14:30.08:0,30,331	0/0:6,0:6:18.05:0,18,198	1/1:1,1:2:5.87:41,6,0
chr10	96891659	.	A	AGCCCG	5872.76	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-7.067;DP=486;FS=16.674;HRun=0;HaplotypeScore=100.9891;InbreedingCoeff=0.9972;MQ=75.20;MQ0=0;MQRankSum=-9.244;QD=70.76;ReadPosRankSum=0.999;VQSLOD=5.5004;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,17:31:72.24:1938,72,0	0/0:9,0:9:27.09:0,27,575	0/0:24,0:24:64.46:0,64,1249	0/0:11,0:10:30.10:0,30,607	0/0:24,0:24:60.11:0,60,958	0/0:13,0:13:39.13:0,39,810	0/0:20,0:20:60.19:0,60,1224	1/1:7,15:23:63.19:1672,63,0	0/0:13,0:13:39.13:0,39,812	0/0:20,0:20:60.20:0,60,1198	0/0:21,0:21:54.14:0,54,971	0/0:23,0:23:66.23:0,66,1406	0/0:12,0:12:33.11:0,33,687	0/0:12,0:12:33.11:0,33,689	0/0:14,0:14:36.12:0,36,767	1/1:4,7:11:30.05:770,30,0	0/0:33,0:33:90.21:0,90,1765	1/1:2,9:11:33.11:932,33,0	0/0:16,0:16:45.14:0,45,881	0/0:18,0:18:52.64:0,53,899	0/0:23,0:23:56.68:0,57,1174	0/0:14,0:14:30.09:0,30,599	0/0:13,0:13:36.07:0,36,588	0/0:16,0:16:45.11:0,45,914	0/0:16,0:16:48.06:0,48,785	0/0:21,0:21:60.17:0,60,1073	0/0:17,0:17:48.16:0,48,1022	1/1:0,6:6:18.06:560,18,0
chr10	96891736	.	A	ATTT	2828.57	PASS	AB=0.778;AC=11;AF=0.196;AN=56;BaseQRankSum=0.216;DP=452;FS=14.446;HRun=9;HaplotypeScore=70.8112;InbreedingCoeff=0.8425;MQ=65.50;MQ0=0;MQRankSum=-2.796;QD=27.20;ReadPosRankSum=-0.247;VQSLOD=0.6236;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:31:71.70:560,72,0	0/0:4,0:4:2.95:0,3,38	0/1:5,0:6:12.98:13,0,132	0/0:12,0:11:11.46:0,11,144	0/0:26,0:26:66.16:0,66,834	0/0:13,0:13:36.11:0,36,455	0/0:12,0:13:32.98:0,33,370	1/1:8,17:26:54.14:1004,54,0	0/0:12,0:12:30.09:0,30,379	0/0:19,0:19:45.10:0,45,558	0/0:13,0:13:33.09:0,33,399	0/0:20,0:20:53.78:0,54,648	0/0:13,0:13:36.11:0,36,455	0/0:13,0:13:39.06:0,39,473	0/0:19,0:19:46.63:0,47,576	1/1:1,0:11:25.15:186,25,0	0/0:37,0:37:73.95:0,74,1087	1/1:2,18:20:42.14:828,42,0	0/0:15,0:14:36.08:0,36,455	0/0:14,0:14:42.13:0,42,531	0/0:9,0:9:27.09:0,27,340	0/0:5,0:5:12.02:0,12,152	0/0:15,0:15:39.06:0,39,462	0/0:12,0:12:33.11:0,33,417	0/0:22,0:22:66.21:0,66,834	0/0:15,0:14:36.06:0,36,427	0/0:27,0:27:72.13:0,72,837	1/1:1,8:9:21.07:414,21,0
chr10	96891928	.	TG	T	2871.28	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=2.318;DP=336;FS=2.124;HRun=1;HaplotypeScore=119.8609;InbreedingCoeff=0.6093;MQ=62.50;MQ0=1;MQRankSum=6.858;QD=8.97;ReadPosRankSum=1.671;VQSLOD=1.3736;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:48.33:236,48,0	1/1:6,0:6:9.81:58,10,0	0/0:7,0:4:3.46:0,3,25	0/0:9,0:5:10.90:0,11,45	1/1:11,0:11:7.77:61,8,0	1/1:9,0:9:9.13:50,9,0	1/1:18,0:17:32.73:158,33,0	1/1:12,0:11:11.13:66,11,0	1/1:13,0:13:18.79:87,19,0	1/1:19,1:19:42.68:249,43,0	1/1:13,0:13:24.13:129,24,0	1/1:10,0:10:17.94:93,18,0	1/1:9,0:9:25.40:134,25,0	1/1:7,1:8:8.91:66,9,0	1/1:10,0:10:21.41:110,21,0	1/1:7,0:7:17.62:77,18,0	1/1:18,2:20:23.71:155,24,0	1/1:11,2:13:32.69:178,33,0	1/1:12,0:12:21.36:98,21,0	1/1:12,0:12:20.62:98,21,0	1/1:17,0:17:30.10:217,30,0	1/1:4,0:4:11.02:51,11,0	0/1:7,0:7:1.24:14,0,1	1/1:14,0:14:18.35:108,18,0	1/1:11,1:12:23.03:146,23,0	1/1:19,0:18:31.75:188,32,0	1/1:14,0:14:33.66:134,34,0	1/1:4,0:4:7.36:27,7,0
chr10	96892204	.	T	TAAAAAA	1380.94	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-0.728;DP=313;FS=3.640;HRun=12;HaplotypeScore=62.3019;InbreedingCoeff=0.7861;MQ=57.16;MQ0=19;MQRankSum=-7.225;QD=20.01;ReadPosRankSum=-3.392;VQSLOD=-0.6467;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:9:6.02:157,6,0	0/0:5,0:5:8.86:0,9,123	0/0:9,0:6:15.03:0,15,221	0/0:8,0:5:6.84:0,7,95	0/0:12,0:11:20.82:0,21,355	0/0:19,0:18:41.97:0,42,695	0/0:9,0:9:17.94:0,18,305	1/1:13,12:27:49.88:496,50,0	0/0:6,0:5:15.05:0,15,254	0/0:14,0:13:29.01:0,29,419	0/0:17,0:17:38.97:0,39,634	0/0:9,0:8:14.97:0,15,220	0/0:6,0:6:11.84:0,12,203	0/0:5,0:5:5.94:0,6,102	0/0:7,0:7:11.87:0,12,203	1/1:5,0:5:11.99:217,12,0	0/0:19,0:18:36.75:0,37,786	1/1:12,2:13:24:423,24,0	0/0:22,0:20:41.85:0,42,683	0/0:6,0:6:1.93:0,2,238	0/0:6,0:6:18.06:0,18,305	0/0:5,0:6:12.04:0,12,203	0/0:6,0:7:20.90:0,21,319	0/0:2,0:1:3.01:0,3,47	0/0:11,0:11:29.98:0,30,501	0/0:19,0:21:53.90:0,54,860	0/0:16,0:16:39.94:0,40,663	1/1:4,3:9:9.03:248,9,0
chr10	96894396	.	AT	A	1292.63	PASS	AB=0.907;AC=13;AF=0.241;AN=54;BaseQRankSum=8.452;DP=509;FS=1.612;HRun=11;HaplotypeScore=50.3174;InbreedingCoeff=0.7004;MQ=67.36;MQ0=4;MQRankSum=-0.821;QD=7.83;ReadPosRankSum=0.048;VQSLOD=1.6375;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:30:27.11:330,27,0	0/0:5,0:5:9.02:0,9,96	0/0:11,0:10:11.04:0,11,93	./.	0/0:37,0:37:96.23:0,96,1017	0/0:18,0:18:42.06:0,42,435	0/0:18,0:15:33.08:0,33,351	1/1:5,13:18:13.14:270,13,0	0/0:13,0:13:29.95:0,30,293	0/0:27,1:27:32.48:0,32,538	0/0:25,2:27:19.85:0,20,603	0/0:11,0:12:20.20:0,20,242	0/0:16,0:16:30.08:0,30,320	0/0:10,0:10:18.05:0,18,192	0/0:14,0:13:12.02:0,12,120	1/1:3,18:21:38.95:320,39,0	0/1:23,3:26:4.17:4,0,371	1/1:2,13:15:33.43:272,33,0	0/0:20,2:20:14.38:0,14,334	0/1:23,3:26:11.03:11,0,463	0/1:12,1:13:9.60:10,0,113	0/0:15,0:15:36.02:0,36,350	0/0:12,0:12:36.09:0,36,384	0/0:10,0:10:21.05:0,21,224	0/0:26,2:28:22.89:0,23,655	0/0:21,0:21:48.11:0,48,502	0/0:22,1:22:45.08:0,45,460	1/1:5,10:16:32:252,32,0
chr10	96895662	.	CT	C	4171.72	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.812;DP=1082;FS=5.504;HRun=2;HaplotypeScore=157.5543;InbreedingCoeff=0.9999;MQ=55.98;MQ0=13;MQRankSum=-8.509;QD=24.83;ReadPosRankSum=-3.734;VQSLOD=2.0913;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:36:38.46:469,38,0	0/0:12,0:12:36.12:0,36,539	0/0:50,0:21:63.10:0,63,828	0/0:62,1:22:48.82:0,49,672	0/0:36,0:36:99:0,108,1617	0/0:22,0:22:60.68:0,61,915	0/0:40,1:41:99:0,114,1688	1/1:1,32:34:91.59:1203,92,0	0/0:44,0:44:99:0,129,1862	0/0:45,0:45:99:0,132,1936	0/0:23,0:23:63.16:0,63,899	0/0:53,0:53:99:0,150,2226	0/0:43,0:43:99:0,124,1822	0/0:38,0:38:99:0,108,1608	0/0:66,0:66:99:0,187,2764	1/1:6,44:56:99:1312,123,0	0/0:39,0:39:99:0,114,1672	1/1:12,15:27:63.09:719,63,0	0/0:32,0:31:93.32:0,93,1391	0/0:23,0:23:66.22:0,66,975	0/0:91,1:92:99:0,199,3445	0/0:32,0:32:90.30:0,90,1341	0/0:24,1:25:69.21:0,69,1012	0/0:55,0:55:99:0,157,2335	0/0:23,0:23:66.16:0,66,938	0/0:23,0:23:63.20:0,63,909	0/0:33,0:33:99:0,99,1475	1/1:0,14:14:36.12:467,36,0
chr10	96895663	.	T	TCACAC	5229.60	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=13.316;DP=1084;FS=2.042;HRun=0;HaplotypeScore=236.6695;InbreedingCoeff=0.8752;MQ=56.03;MQ0=12;MQRankSum=-8.000;QD=30.40;ReadPosRankSum=-3.900;VQSLOD=4.0614;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:37.62:478,38,0	0/0:13,0:13:36.12:0,36,781	0/0:48,0:21:63.13:0,63,1014	0/0:62,0:22:47.18:0,47,836	0/0:37,0:37:99:0,108,2276	0/0:22,0:22:60.68:0,61,1330	0/0:40,0:40:99:0,115,2332	1/1:37,0:36:79.35:836,79,0	0/0:44,0:44:99:0,129,2709	0/0:44,0:44:99:0,132,2676	0/0:23,0:23:63.16:0,63,1212	0/0:52,0:52:99:0,150,3075	0/0:44,0:44:99:0,126,2421	0/0:39,0:39:99:0,108,2341	0/0:65,0:65:99:0,187,3873	1/1:53,3:56:99:2353,121,0	0/0:38,0:38:99:0,114,2322	1/1:21,7:28:65.38:1358,65,0	0/0:32,0:31:93.32:0,93,1757	0/0:25,0:25:66.22:0,66,1312	0/0:92,0:93:99:0,221,4878	0/0:31,0:31:90.31:0,90,1883	0/0:26,0:26:69.22:0,69,1446	0/0:55,0:55:99:0,157,3242	0/0:23,0:23:66.16:0,66,1336	0/0:22,0:22:63.20:0,63,1310	0/0:34,0:34:99:0,99,2166	0/1:14,0:14:12.48:204,0,12
chr10	96895679	.	CAT	C	1623.69	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.254;DP=1106;FS=4.542;HRun=0;HaplotypeScore=187.0904;InbreedingCoeff=0.9943;MQ=57.26;MQ0=7;MQRankSum=-9.295;QD=36.90;ReadPosRankSum=-4.457;VQSLOD=3.0100;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:54.90:0,55,1030	0/0:17,0:17:51.17:0,51,993	0/0:54,0:28:56.79:0,57,1204	0/0:64,1:32:71.68:0,72,1280	0/0:38,0:38:99:0,111,2217	0/0:21,0:21:60.17:0,60,1185	0/0:40,0:40:99:0,114,2289	1/1:4,25:29:16.73:1156,17,0	0/0:48,0:48:99:0,141,2836	0/0:45,0:45:99:0,135,2698	0/0:20,0:20:54.19:0,54,1081	0/0:51,1:52:99:0,104,2951	0/0:44,0:44:99:0,129,2601	0/0:45,0:45:99:0,135,2669	0/0:63,0:63:99:0,184,3690	0/0:53,0:53:61.15:0,61,1561	0/0:40,0:40:99:0,117,2349	0/0:32,0:32:88.04:0,88,1625	0/0:28,0:28:81.25:0,81,1568	0/0:26,0:26:43.90:0,44,1424	0/0:98,0:98:99:0,253,5217	0/0:29,0:29:84.29:0,84,1694	0/0:26,0:26:69.24:0,69,1402	0/0:58,0:58:99:0,166,3309	0/0:24,0:24:72.25:0,72,1448	0/0:26,0:26:77.99:0,78,1493	0/0:31,0:31:93.32:0,93,1876	1/1:0,15:15:36.12:587,36,0
chr10	96895786	.	TCA	T	2150.45	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.051;DP=1183;FS=6.405;HRun=0;HaplotypeScore=158.3969;InbreedingCoeff=0.9979;MQ=59.92;MQ0=7;MQRankSum=-1.227;QD=35.25;ReadPosRankSum=-3.530;VQSLOD=3.8572;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,141,2511	0/0:19,0:19:57.18:0,57,986	0/0:44,0:18:37.82:0,38,631	0/0:68,0:28:55.58:0,56,680	0/0:23,0:23:54.12:0,54,886	0/0:23,0:23:60.20:0,60,1050	0/0:45,0:45:99:0,117,1997	1/1:3,51:53:99:1970,108,0	0/0:48,0:48:99:0,129,2351	0/0:41,0:41:99:0,108,1954	0/0:21,0:21:57.18:0,57,978	0/0:54,0:54:99:0,159,2754	0/0:46,0:46:99:0,129,2244	0/0:39,0:39:99:0,108,1933	0/0:51,0:51:99:0,141,2491	0/0:59,0:59:99:0,132,2349	0/0:46,0:47:99:0,129,2309	0/0:36,0:37:99:0,103,1803	0/0:34,0:34:93.31:0,93,1645	0/0:31,0:31:87.27:0,87,1533	0/0:112,0:110:99:0,298,5328	0/0:34,0:34:99:0,99,1638	0/0:29,0:29:81.28:0,81,1468	0/0:62,0:62:99:0,175,3078	0/0:24,0:24:63.18:0,63,1045	0/0:45,0:45:99:0,103,2264	0/0:26,0:26:75.23:0,75,1296	1/1:0,7:7:21.07:301,21,0
chr10	96895856	.	T	TCACA	9616.47	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-11.714;DP=1125;FS=14.711;HRun=0;HaplotypeScore=184.8414;InbreedingCoeff=0.8739;MQ=57.99;MQ0=12;MQRankSum=-0.346;QD=35.88;ReadPosRankSum=-1.270;VQSLOD=3.7873;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,29:63:99:2885,121,0	0/0:23,0:23:63.20:0,63,1079	0/0:44,0:19:11.63:0,12,543	0/1:55,0:28:20.42:20,0,495	0/0:34,0:34:93.27:0,93,1515	0/0:20,0:20:57.18:0,57,965	0/0:45,0:45:99:0,111,1741	1/1:8,34:48:99:2189,124,0	0/0:46,0:46:99:0,105,1762	0/0:34,0:34:90.20:0,90,1471	0/0:19,0:19:45.11:0,45,698	0/0:52,0:52:99:0,132,2251	0/0:38,0:38:99:0,102,1736	0/0:43,0:43:99:0,123,2008	0/0:53,0:53:99:0,144,2457	1/1:8,39:47:63.21:1568,63,0	0/0:58,0:58:99:0,128,2153	1/1:14,29:44:99:2649,114,0	0/0:31,0:27:66.15:0,66,960	0/0:26,0:26:69.18:0,69,1123	0/0:96,0:94:99:0,238,3747	0/0:27,0:27:75.26:0,75,1319	0/0:25,0:25:66.20:0,66,1105	0/0:54,0:54:99:0,156,2540	0/0:26,0:26:72.22:0,72,1203	0/0:34,0:34:93.26:0,93,1500	0/0:29,0:29:75.21:0,75,1226	1/1:0,7:6:12.04:305,12,0
chr10	96898737	.	TTG	T	73.05	PASS	AB=0.913;AC=13;AF=0.241;AN=54;BaseQRankSum=4.932;DP=635;FS=3.149;HRun=0;HaplotypeScore=94.3053;InbreedingCoeff=-0.1112;MQ=62.50;MQ0=25;MQRankSum=-2.664;QD=0.34;ReadPosRankSum=2.361;VQSLOD=1.3631;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:24.04:0,24,275	0/1:5,5:10:51.95:52,0,108	0/0:41,0:19:3.01:0,3,42	./.	0/0:22,0:20:18.06:0,18,271	0/0:29,0:27:42.10:0,42,588	0/1:22,1:23:29.75:30,0,399	0/0:22,0:22:18.01:0,18,218	1/1:11,0:17:11.36:56,11,0	0/1:14,2:14:18.41:18,0,166	0/0:16,0:16:0.93:0,1,167	0/1:20,1:21:3.43:3,0,358	0/1:10,0:10:10.63:11,0,114	0/1:16,2:18:4.56:5,0,336	0/1:16,2:18:9.44:9,0,294	0/0:6,0:11:6:0,6,52	0/0:29,0:28:36.12:0,36,538	0/1:19,1:20:7.36:7,0,508	0/0:19,0:17:15.04:0,15,204	0/0:12,0:12:18.06:0,18,251	0/0:58,0:58:64.95:0,65,862	0/0:25,0:24:14.64:0,15,184	0/1:15,3:18:12.46:12,0,252	0/0:28,2:31:20.59:0,21,662	0/1:19,0:19:1.69:2,0,200	0/0:19,0:18:18.06:0,18,267	0/1:24,1:25:6.44:6,0,299	0/0:11,0:11:9.02:0,9,105
chr10	96908717	.	G	GT	470.16	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.229;DP=348;FS=9.234;HRun=11;HaplotypeScore=38.6413;InbreedingCoeff=0.6796;MQ=73.18;MQ0=3;MQRankSum=1.224;QD=15.67;ReadPosRankSum=1.324;VQSLOD=3.5500;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,17:22:44.92:441,45,0	0/0:4,0:4:5.93:0,6,42	0/0:24,0:14:14.47:0,14,107	0/0:13,0:7:5.63:0,6,45	0/0:10,0:11:22.87:0,23,166	0/0:9,0:9:17.90:0,18,135	0/0:2,0:3:7.95:0,8,47	0/0:24,0:19:34.47:0,34,244	0/0:8,0:7:14.92:0,15,116	0/0:13,0:13:23.86:0,24,185	0/0:14,0:16:34.87:0,35,259	0/0:7,0:7:14.94:0,15,116	0/0:7,0:7:17.80:0,18,128	0/0:8,0:8:23.83:0,24,177	0/0:11,0:12:28.86:0,29,208	1/1:2,5:7:15.02:147,15,0	0/0:27,0:27:68.61:0,69,521	0/0:22,0:23:58.70:0,59,434	0/0:9,0:10:28.44:0,28,200	0/0:10,0:10:29.84:0,30,227	0/0:2,0:2:2.95:0,3,19	0/0:4,0:4:11.93:0,12,90	0/0:7,0:7:17.93:0,18,139	0/0:12,0:12:32.87:0,33,255	0/0:22,0:23:61.65:0,62,454	0/0:16,1:17:8.38:0,8,243	0/0:16,0:17:34.81:0,35,261	0/0:5,0:5:2.95:0,3,23
chr10	96909129	.	GT	G	784.88	PASS	AB=0.830;AC=13;AF=0.232;AN=56;BaseQRankSum=4.016;DP=388;FS=8.213;HRun=14;HaplotypeScore=43.7762;InbreedingCoeff=0.4199;MQ=66.47;MQ0=0;MQRankSum=0.906;QD=6.13;ReadPosRankSum=-0.916;VQSLOD=1.0662;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:10,11:22:23.15:129,0,23	0/0:3,0:3:3:0,3,28	0/0:19,0:7:8.59:0,9,51	0/0:11,0:10:1.64:0,2,23	0/0:15,0:15:33.03:0,33,302	0/0:13,0:13:17.97:0,18,159	0/1:12,2:14:11.20:11,0,180	1/1:3,11:14:32.49:215,32,0	0/1:8,2:10:16.89:17,0,143	0/0:27,1:26:33.46:0,33,447	0/0:11,0:11:18.01:0,18,163	0/0:9,2:11:6.45:0,6,202	0/0:12,0:12:27:0,27,244	0/0:9,0:9:20.98:0,21,186	0/0:14,1:16:13.51:0,14,241	1/1:5,7:13:16.83:107,17,0	0/0:21,1:22:27.48:0,27,397	1/1:6,14:21:45.68:299,46,0	0/0:18,0:18:8.74:0,9,268	0/0:13,1:14:13.83:0,14,226	0/0:16,0:16:35.85:0,36,314	0/0:8,0:8:18.01:0,18,164	0/1:6,1:7:5.58:6,0,91	0/1:16,2:18:2.14:2,0,260	0/0:8,1:9:2.49:0,2,138	0/0:15,1:17:12.30:0,12,236	0/0:7,0:7:12:0,12,107	1/1:0,9:9:23.81:164,24,0
chr10	96909651	.	A	ACTCCTCTTC	1954.88	PASS	AB=0.536;AC=5;AF=0.089;AN=56;BaseQRankSum=4.291;DP=662;FS=3.697;HRun=0;HaplotypeScore=172.4674;InbreedingCoeff=0.7701;MQ=63.93;MQ0=2;MQRankSum=-4.354;QD=41.59;ReadPosRankSum=-2.504;VQSLOD=3.2300;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:30:57.67:0,58,1562	0/0:14,0:14:36.09:0,36,838	0/0:38,0:27:21.19:0,21,718	0/0:35,0:24:21.44:0,21,315	0/0:13,0:13:27.06:0,27,583	0/0:19,0:19:45.15:0,45,1184	0/0:26,0:26:63.22:0,63,1737	1/1:22,0:21:48.12:973,48,0	0/0:33,0:33:16.13:0,16,2131	0/0:26,0:26:51.17:0,51,1366	0/0:11,0:11:24.07:0,24,600	0/0:25,0:25:63.22:0,63,1789	0/0:25,0:25:54.14:0,54,1331	0/0:34,0:34:84.27:0,84,2172	0/0:42,0:42:99:0,117,3037	0/0:30,0:30:75.25:0,75,2040	0/0:30,0:30:69.17:0,69,1717	0/1:2,8:15:33.69:134,0,34	0/0:21,0:21:44.77:0,45,864	0/0:15,0:15:42.10:0,42,977	0/0:40,0:39:99:0,99,2421	0/0:18,0:18:45.10:0,45,962	0/0:12,0:12:30.08:0,30,778	0/0:30,0:30:66.20:0,66,1694	0/0:14,0:14:30.09:0,30,756	0/0:20,0:20:57.19:0,57,1482	0/0:14,0:14:33.11:0,33,908	1/1:1,8:10:21.07:977,21,0
chr10	96909666	.	CCTCCTT	C	147.27	PASS	AB=0.686;AC=1;AF=0.018;AN=56;BaseQRankSum=5.456;DP=665;FS=7.565;HRun=0;HaplotypeScore=136.2106;InbreedingCoeff=-0.0207;MQ=63.30;MQ0=4;MQRankSum=0.634;QD=6.14;ReadPosRankSum=-3.405;VQSLOD=0.8670;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.28:0,81,2796	0/0:12,0:12:36.09:0,36,1176	0/0:40,0:25:11.48:0,11,1304	0/0:41,0:23:31.97:0,32,815	0/0:13,0:13:36.08:0,36,846	0/0:16,0:16:48.14:0,48,1659	0/0:29,0:29:87.28:0,87,2844	0/1:13,11:23:99:222,0,575	0/0:33,0:33:99:0,99,3098	0/0:28,0:28:84.27:0,84,2659	0/0:12,0:12:36.11:0,36,1265	0/0:24,0:24:72.20:0,72,2491	0/0:23,0:23:69.21:0,69,2079	0/0:29,0:29:87.29:0,87,2955	0/0:43,0:43:99:0,126,4297	0/0:27,0:27:81.27:0,81,2829	0/0:27,0:27:78.22:0,78,2430	0/0:14,0:14:12.04:0,12,296	0/0:19,0:19:57.17:0,57,1559	0/0:19,0:19:57.13:0,57,1539	0/0:39,0:38:99:0,114,3884	0/0:18,0:18:54.14:0,54,1444	0/0:15,0:15:45.13:0,45,1450	0/0:31,0:31:86.63:0,87,2774	0/0:14,0:14:42.14:0,42,1322	0/0:24,0:24:72.24:0,72,2350	0/0:13,0:13:39.13:0,39,1299	0/0:11,0:11:19.98:0,20,491
chr10	96912464	.	TTG	T	94.09	PASS	AB=0.988;AC=14;AF=0.304;AN=46;BaseQRankSum=0.210;DP=618;FS=20.241;HRun=0;HaplotypeScore=78.9376;InbreedingCoeff=-0.2045;MQ=74.22;MQ0=19;MQRankSum=-0.124;QD=0.33;ReadPosRankSum=1.160;VQSLOD=0.2489;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/1:9,0:9:17.93:19,0,18	./.	0/0:32,0:24:0:0,0,0	0/1:13,0:13:18.85:19,0,92	0/0:18,0:18:9.03:0,9,124	1/1:26,0:26:7.11:43,7,0	./.	0/0:25,0:25:20.97:0,21,205	0/1:33,0:32:20.12:20,0,157	0/1:6,0:6:10.69:11,0,19	./.	0/1:15,0:15:13.85:14,0,15	0/1:21,0:21:19.61:20,0,38	0/1:18,1:19:17.27:17,0,133	0/1:11,0:11:0:0,0,0	0/1:39,0:37:30.39:30,0,250	0/0:22,0:22:23.94:0,24,227	0/0:11,0:11:3:0,3,26	0/0:10,0:9:3.01:0,3,42	0/1:42,0:38:19.66:20,0,52	0/0:12,0:13:5.99:0,6,50	./.	0/1:34,4:38:4.74:5,0,201	0/0:22,0:21:11.23:0,11,166	0/0:22,0:20:8.05:0,8,76	0/1:13,0:13:6.84:7,0,52	0/0:12,0:12:17.96:0,18,185
chr10	96912645	.	GCACAGC	G	2233.81	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.479;DP=552;FS=6.617;HRun=0;HaplotypeScore=118.2794;InbreedingCoeff=0.9852;MQ=77.99;MQ0=0;MQRankSum=-9.190;QD=48.56;ReadPosRankSum=0.072;VQSLOD=3.3405;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:32:66.23:1491,66,0	0/0:5,0:5:15.05:0,15,541	0/0:24,0:24:62.94:0,63,1956	0/0:24,0:22:40.64:0,41,1565	0/0:13,0:13:36.12:0,36,1266	0/0:12,0:12:30.10:0,30,1082	0/0:43,0:43:99:0,129,4461	0/0:22,0:22:63.22:0,63,2208	0/0:27,0:27:75.26:0,75,2611	0/0:13,0:13:36.12:0,36,1275	0/0:8,0:8:21.07:0,21,733	0/0:27,0:27:72.25:0,72,2590	0/0:18,0:18:48.16:0,48,1727	0/0:16,0:16:45.15:0,45,1624	0/0:25,0:25:75.26:0,75,2704	1/1:1,13:14:36.12:865,36,0	0/0:30,0:30:87.30:0,87,3064	0/0:31,0:31:93.32:0,93,3253	0/0:15,0:15:39.12:0,39,1262	0/0:8,0:8:24.08:0,24,772	0/0:43,0:43:99:0,123,4225	0/0:8,0:8:24.08:0,24,788	0/0:8,0:8:24.08:0,24,806	0/0:33,0:33:90.31:0,90,3245	0/0:17,0:17:48.15:0,48,1579	0/0:16,0:16:48.16:0,48,1723	0/0:12,0:12:36.12:0,36,1212	0/0:8,0:8:24.08:0,24,784
chr10	96912861	.	CTTCT	C	2839.98	PASS	AB=0.875;AC=37;AF=0.804;AN=46;BaseQRankSum=2.674;DP=363;FS=0.000;HRun=0;HaplotypeScore=69.3113;InbreedingCoeff=0.4550;MQ=67.56;MQ0=1;MQRankSum=-0.444;QD=10.72;ReadPosRankSum=2.231;VQSLOD=2.1040;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:23:2.80:13,3,0	0/1:6,1:7:39.75:40,0,64	./.	./.	1/1:8,11:19:21.07:320,21,0	1/1:7,7:14:12.04:183,12,0	1/1:13,7:19:4.26:48,4,0	./.	0/0:13,0:13:30.10:0,30,674	1/1:4,0:7:8.99:77,9,0	1/1:1,0:9:11.99:101,12,0	1/1:12,4:16:6.02:92,6,0	0/0:8,0:8:9.03:0,9,206	1/1:2,3:5:9.03:137,9,0	1/1:4,4:8:6.02:92,6,0	0/0:8,0:7:0:0,0,0	1/1:14,11:25:18.06:275,18,0	./.	1/1:4,3:7:9.02:117,9,0	1/1:2,4:6:12.04:183,12,0	0/0:11,0:11:0.47:0,0,1	1/1:7,5:12:9.03:137,9,0	1/1:5,10:15:1.12:43,1,0	1/1:6,14:20:24.08:366,24,0	1/1:6,8:14:12.04:183,12,0	1/1:12,9:22:30.10:440,30,0	1/1:14,2:16:9.01:116,9,0	./.
chr10	96913373	.	C	CT	655.53	PASS	AB=0.871;AC=12;AF=0.214;AN=56;BaseQRankSum=-2.163;DP=482;FS=2.748;HRun=15;HaplotypeScore=70.8357;InbreedingCoeff=-0.0418;MQ=74.37;MQ0=9;MQRankSum=1.026;QD=3.03;ReadPosRankSum=1.017;VQSLOD=-0.0255;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,22:37:3.79:326,4,0	0/1:7,1:8:16.43:16,0,24	0/0:35,0:18:12.63:0,13,67	0/1:29,0:15:4.75:5,0,25	0/1:16,4:20:11.79:12,0,95	0/0:18,1:24:3.10:0,3,214	0/0:5,0:5:5.87:0,6,36	0/0:16,0:28:18.96:0,19,78	0/0:10,0:10:17.63:0,18,108	0/1:14,3:17:18.40:18,0,99	0/0:12,0:13:19.47:0,19,113	0/1:7,0:7:11.47:11,0,38	0/0:11,0:11:11.56:0,12,72	0/0:7,0:7:11.67:0,12,72	0/1:14,1:16:5.65:6,0,74	0/1:8,8:16:9.10:143,0,9	0/0:19,2:22:20.93:0,21,229	0/1:5,15:21:1.71:202,0,2	0/1:23,1:25:14.35:14,0,129	0/0:18,0:18:23.33:0,23,142	0/0:13,0:16:12.92:0,13,65	0/0:3,0:3:8.81:0,9,53	0/0:7,0:7:8.56:0,9,47	0/0:15,0:15:16.15:0,16,118	0/1:19,0:20:43.96:44,0,68	0/0:15,1:17:28.53:0,29,153	0/0:14,1:14:23.38:0,23,143	0/0:5,0:16:22.16:0,22,83
chr10	96915204	.	A	AT	908.13	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.214;DP=640;FS=7.251;HRun=8;HaplotypeScore=57.9305;InbreedingCoeff=0.8974;MQ=65.06;MQ0=1;MQRankSum=2.077;QD=25.95;ReadPosRankSum=0.678;VQSLOD=4.3721;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.04:0,93,848	0/0:12,0:12:36.01:0,36,325	0/0:3,0:2:5.96:0,6,45	0/0:14,0:11:18:0,18,163	0/0:26,0:26:62.97:0,63,568	0/0:26,0:26:69.02:0,69,626	0/0:23,0:23:60:0,60,543	0/0:33,0:32:81.01:0,81,732	0/0:14,0:14:42.01:0,42,380	0/0:29,0:29:78.03:0,78,712	0/0:16,0:16:45.02:0,45,412	0/0:17,0:17:45.02:0,45,412	0/0:14,0:14:36:0,36,324	0/0:14,0:14:38.99:0,39,347	0/0:23,0:23:66.02:0,66,598	0/0:23,0:23:60.03:0,60,549	0/0:30,0:30:77.98:0,78,700	1/1:3,32:35:87.26:1003,87,0	0/0:22,0:22:54.01:0,54,491	0/0:37,0:37:95.97:0,96,864	0/0:28,0:28:78.02:0,78,709	0/0:29,0:29:81.04:0,81,739	0/0:22,0:22:53.99:0,54,484	0/0:21,0:20:57.03:0,57,522	0/0:25,1:26:40.42:0,40,624	0/0:20,0:20:51:0,51,461	0/0:37,0:37:95.99:0,96,866	0/0:14,0:14:42.02:0,42,384
chr10	96915714	.	AG	A	799.56	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.667;DP=622;FS=26.228;HRun=7;HaplotypeScore=68.9731;InbreedingCoeff=0.9795;MQ=72.66;MQ0=2;MQRankSum=0.145;QD=22.84;ReadPosRankSum=-2.233;VQSLOD=1.5895;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:90.29:0,90,1131	0/0:11,0:11:27.09:0,27,339	0/0:26,0:23:59.34:0,59,613	0/0:29,0:22:48.11:0,48,572	0/0:20,0:20:51.16:0,51,641	0/0:11,0:11:24.06:0,24,289	0/0:37,0:37:99:0,108,1344	1/1:2,27:29:78.17:794,78,0	0/0:16,0:16:36.11:0,36,452	0/0:18,0:18:45.14:0,45,555	0/0:17,0:17:48.15:0,48,604	0/0:24,0:24:63.19:0,63,779	0/0:16,0:16:39.12:0,39,490	0/0:27,0:27:72.23:0,72,905	0/0:14,0:14:39.12:0,39,490	0/0:21,0:21:54.17:0,54,679	0/0:22,0:22:63.20:0,63,792	0/0:15,0:15:39.12:0,39,491	0/0:17,0:17:48.14:0,48,590	0/0:24,0:24:66.21:0,66,827	0/0:70,1:71:99:0,159,2263	0/0:25,0:25:54.17:0,54,679	0/0:7,0:7:21.07:0,21,264	0/0:25,0:24:72.23:0,72,904	0/0:12,0:12:27.09:0,27,339	0/0:28,0:28:66.18:0,66,793	0/0:16,0:16:48.11:0,48,575	1/1:2,4:6:12.03:122,12,0
chr10	96915751	.	TAGAC	T	1192.46	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.710;DP=591;FS=20.756;HRun=0;HaplotypeScore=95.5536;InbreedingCoeff=0.9876;MQ=65.00;MQ0=2;MQRankSum=-5.473;QD=31.38;ReadPosRankSum=-3.400;VQSLOD=1.4677;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,2416	0/0:8,0:8:18.06:0,18,462	0/0:23,0:15:17.51:0,18,251	0/0:32,0:26:46.39:0,46,943	0/0:19,0:19:48.16:0,48,1114	0/0:14,0:14:36.12:0,36,837	0/0:35,0:35:72.17:0,72,1494	1/1:15,13:27:60.19:976,60,0	0/0:17,0:17:48.16:0,48,1092	0/0:17,0:17:45.15:0,45,1042	0/0:15,0:15:36.11:0,36,865	0/0:18,0:18:48.12:0,48,990	0/0:15,0:15:39.13:0,39,969	0/0:22,0:22:60.17:0,60,1295	0/0:17,0:17:48.15:0,48,1081	0/0:16,0:16:45.15:0,45,1123	0/0:26,0:26:75.24:0,75,1693	0/0:13,0:13:39.13:0,39,912	0/0:12,0:12:33.10:0,33,676	0/0:20,0:20:48.14:0,48,1062	0/0:71,0:70:99:0,187,4419	0/0:20,0:20:54.17:0,54,1230	0/0:10,0:10:24.08:0,24,563	0/0:22,0:21:60.21:0,60,1467	0/0:12,0:12:33.11:0,33,820	0/0:23,0:23:63.21:0,63,1566	0/0:19,0:19:51.17:0,51,1201	1/1:1,9:10:21.03:338,21,0
chr10	96916089	.	CCACACA	C	198.09	PASS	AC=8;AF=0.174;AN=46;BaseQRankSum=4.115;DP=481;FS=3.299;HRun=0;HaplotypeScore=99.0846;InbreedingCoeff=0.6363;MQ=60.07;MQ0=11;MQRankSum=-4.104;QD=3.00;ReadPosRankSum=1.780;VQSLOD=1.9088;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:17:5.89:37,6,0	0/0:7,0:7:3.01:0,3,36	./.	./.	./.	0/0:20,0:19:15.05:0,15,313	0/0:21,0:21:12.04:0,12,267	./.	0/0:14,0:14:12.04:0,12,334	0/0:15,0:15:15.05:0,15,345	0/0:5,0:5:6.91:0,7,155	0/0:22,0:21:12.02:0,12,346	0/0:16,0:16:9.03:0,9,156	0/0:10,0:10:17.93:0,18,303	0/0:18,0:18:15.05:0,15,352	1/1:9,1:10:3.01:57,3,0	0/0:33,0:32:36.12:0,36,1022	1/1:22,0:24:12.04:167,12,0	0/0:17,0:17:9.03:0,9,259	0/0:13,0:14:12.02:0,12,244	0/0:38,0:35:32.43:0,32,773	./.	0/0:8,0:8:3.01:0,3,73	0/0:34,0:33:30.07:0,30,785	0/0:13,0:13:15.05:0,15,386	0/0:13,0:13:24.08:0,24,450	0/0:10,0:10:6.02:0,6,135	1/1:8,3:10:3.01:60,3,0
chr10	96917400	.	TA	T	462.58	PASS	AB=0.921;AC=6;AF=0.107;AN=56;BaseQRankSum=4.583;DP=496;FS=3.359;HRun=12;HaplotypeScore=58.3421;InbreedingCoeff=0.5971;MQ=77.60;MQ0=0;MQRankSum=-2.046;QD=7.23;ReadPosRankSum=-2.505;VQSLOD=1.6504;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:45:92.81:0,93,892	0/0:4,0:4:6.01:0,6,61	0/1:16,1:18:0.08:0,0,193	0/1:15,1:16:25.31:25,0,135	0/0:18,0:23:39.64:0,40,349	0/0:17,0:17:42.08:0,42,426	0/0:21,0:21:57.09:0,57,565	1/1:4,22:26:65.73:511,66,0	0/0:25,0:26:65.90:0,66,629	0/0:18,0:18:27.05:0,27,270	0/0:13,0:15:32.89:0,33,313	0/0:14,1:15:15.78:0,16,317	0/0:5,0:5:11.98:0,12,101	0/0:13,0:13:30.04:0,30,293	0/0:20,1:21:33.86:0,34,514	0/0:14,0:15:35.80:0,36,332	0/0:31,2:34:60.74:0,61,770	0/0:15,0:15:33.05:0,33,328	0/0:19,0:19:39.07:0,39,390	0/0:17,0:17:27.93:0,28,271	0/0:24,0:25:59.93:0,60,575	0/0:7,0:7:17.98:0,18,166	0/0:10,0:10:17.98:0,18,165	0/0:18,0:19:44.91:0,45,435	0/0:7,0:7:18.04:0,18,183	0/0:15,0:15:39.05:0,39,387	0/0:25,0:26:59.92:0,60,574	1/1:2,2:4:5.95:46,6,0
chr10	96917616	.	C	CATTT	263.17	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.324;DP=403;FS=0.000;HRun=0;HaplotypeScore=62.3630;InbreedingCoeff=0.6355;MQ=68.16;MQ0=1;MQRankSum=0.649;QD=10.97;ReadPosRankSum=0.000;VQSLOD=2.5183;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,9:15:9.03:219,9,0	0/0:8,0:8:18.06:0,18,292	0/0:13,0:11:2.90:0,3,16	0/0:10,0:7:3.01:0,3,49	0/0:18,0:18:39.08:0,39,536	0/0:17,0:17:39.09:0,39,562	0/0:10,0:10:18.05:0,18,257	0/0:19,0:19:39.08:0,39,482	0/0:18,0:18:36.01:0,36,485	0/0:23,0:23:39.10:0,39,542	0/0:16,0:16:33.09:0,33,489	0/0:6,0:6:6.01:0,6,74	0/0:10,0:10:24.07:0,24,369	0/0:10,0:10:24.07:0,24,368	0/0:15,0:15:33.09:0,33,490	1/1:1,6:9:6.02:146,6,0	0/0:19,0:19:48.13:0,48,727	0/0:16,0:17:32.58:0,33,442	0/0:25,0:25:33.06:0,33,426	0/0:15,0:15:33.10:0,33,509	0/0:3,0:3:6:0,6,73	0/0:7,0:7:6.01:0,6,74	0/0:9,0:9:12.03:0,12,172	0/0:7,0:7:21.06:0,21,312	0/0:24,0:24:63.16:0,63,932	0/0:19,0:19:45.15:0,45,713	0/0:28,0:28:48.09:0,48,714	0/0:13,0:12:27.08:0,27,415
chr10	96917711	.	AGAGAGT	A	298.45	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=1.975;DP=480;FS=7.876;HRun=0;HaplotypeScore=94.5358;InbreedingCoeff=0.2140;MQ=52.16;MQ0=23;MQRankSum=2.490;QD=2.57;ReadPosRankSum=-1.289;VQSLOD=1.0906;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:16:3.01:70,3,0	0/0:2,0:2:0.89:0,1,2	0/1:9,0:4:7.21:7,0,39	0/0:21,0:8:13.20:0,13,98	0/0:26,0:26:7.29:0,7,799	0/0:29,0:28:78.54:0,79,1438	0/0:19,0:19:17.25:0,17,432	0/0:30,0:27:13.91:0,14,265	0/0:12,0:12:26.97:0,27,523	0/0:18,0:18:50.87:0,51,784	0/0:35,0:34:48.33:0,48,1331	0/1:10,0:10:15.29:15,0,533	0/0:10,0:9:20.59:0,21,351	0/0:12,0:10:18.87:0,19,278	0/0:10,0:10:24.02:0,24,393	1/1:10,1:10:21.01:275,21,0	0/1:19,0:19:41.97:42,0,722	0/1:13,0:13:18:18,0,176	0/0:15,0:13:17.25:0,17,400	0/0:20,0:20:45.06:0,45,798	0/0:20,0:19:38.95:0,39,520	0/0:9,0:8:24.06:0,24,529	0/0:21,0:21:48.97:0,49,729	0/0:33,0:32:46.63:0,47,1080	0/1:17,0:17:1.69:2,0,508	0/1:20,0:19:3.62:4,0,567	0/0:17,0:16:3.67:0,4,814	0/0:5,0:3:2.99:0,3,24
chr10	96918925	.	CTG	C	725.82	PASS	AB=0.932;AC=16;AF=0.320;AN=50;BaseQRankSum=3.548;DP=624;FS=8.591;HRun=0;HaplotypeScore=83.8013;InbreedingCoeff=0.1005;MQ=63.24;MQ0=16;MQRankSum=2.349;QD=2.19;ReadPosRankSum=2.655;VQSLOD=0.9242;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:8.98:0,9,74	0/0:8,0:8:3.01:0,3,45	./.	./.	0/1:21,1:22:17.48:17,0,142	0/1:17,2:19:17.48:17,0,141	0/1:26,5:31:37.49:37,0,242	0/0:21,0:21:15.05:0,15,181	0/0:30,0:30:24.02:0,24,292	0/0:26,0:26:24:0,24,275	0/0:6,0:6:3.01:0,3,43	0/1:22,0:22:6.25:6,0,182	0/0:15,0:16:1.77:0,2,119	0/0:17,0:17:9.01:0,9,113	0/1:27,1:27:45.31:45,0,303	0/0:18,0:20:3:0,3,26	1/1:26,14:43:15.91:364,16,0	0/0:14,0:14:18.41:0,18,160	./.	1/1:14,5:18:6.02:65,6,0	0/1:31,5:35:26.50:26,0,38	0/0:23,0:22:21:0,21,235	0/0:11,0:12:21.04:0,21,270	0/1:38,3:41:34.73:35,0,665	0/1:22,1:23:11.45:11,0,246	1/1:21,7:27:16.30:192,16,0	1/1:14,3:17:6.02:64,6,0	0/0:6,0:6:2.97:0,3,20
chr10	96919222	.	A	AGAG	838.08	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.238;DP=672;FS=1.886;HRun=0;HaplotypeScore=88.3614;InbreedingCoeff=0.9462;MQ=61.94;MQ0=17;MQRankSum=-0.333;QD=33.52;ReadPosRankSum=1.628;VQSLOD=4.2254;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,138,1989	0/0:5,0:5:12.04:0,12,170	0/0:62,0:19:19.97:0,20,298	0/0:53,0:24:34.93:0,35,400	0/0:23,0:22:51.16:0,51,730	0/0:10,0:10:29.82:0,30,388	0/0:30,0:30:42.08:0,42,830	0/0:22,0:19:24.07:0,24,336	0/0:15,0:15:42.13:0,42,592	0/0:18,0:18:45.15:0,45,649	0/0:14,0:14:30.09:0,30,417	0/0:27,0:27:66.19:0,66,899	0/0:22,0:22:51.17:0,51,743	0/0:14,0:14:36.12:0,36,529	0/0:14,0:14:33.09:0,33,465	0/0:21,0:21:51.17:0,51,742	0/0:30,0:29:62.36:0,62,1091	1/1:4,21:25:45.15:933,45,0	0/0:16,0:14:30.09:0,30,419	0/0:17,0:17:30.06:0,30,417	0/0:39,0:39:92.90:0,93,1309	0/0:20,0:20:48.01:0,48,662	0/0:14,0:14:42.14:0,42,610	0/0:38,0:38:60.08:0,60,1139	0/0:18,0:18:51.14:0,51,704	0/0:22,0:22:54.18:0,54,779	0/0:22,0:22:57.19:0,57,834	0/0:5,0:5:14.92:0,15,186
chr10	96920009	.	CAATAATAATAATAATAAT	C	1280.35	PASS	AB=0.708;AC=5;AF=0.139;AN=36;BaseQRankSum=5.643;DP=195;FS=2.110;HRun=0;HaplotypeScore=95.8500;InbreedingCoeff=0.4839;MQ=65.71;MQ0=1;MQRankSum=1.359;QD=21.34;ReadPosRankSum=-2.580;VQSLOD=1.5218;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:6.01:0,6,67	./.	./.	./.	0/0:2,0:2:3.01:0,3,254	0/0:8,0:9:15.05:0,15,1120	0/0:4,0:4:6.02:0,6,412	1/1:14,16:30:48.05:818,48,0	0/0:5,0:6:6.01:0,6,201	0/0:9,0:9:15.05:0,15,1224	0/0:5,0:5:9.03:0,9,708	./.	0/0:4,0:4:9.03:0,9,633	./.	0/0:4,0:8:6.02:0,6,404	0/0:3,0:6:3.01:0,3,46	0/0:6,0:25:57.18:0,57,2838	0/1:10,0:17:0.38:0,0,54	./.	./.	./.	./.	0/0:4,0:4:6:0,6,101	./.	0/0:7,0:7:9.03:0,9,705	0/0:3,0:5:12.04:0,12,642	0/0:3,0:3:9.03:0,9,464	1/1:4,9:13:12.04:568,12,0
chr10	96920411	.	C	CATGT	1173.75	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=-6.266;DP=479;FS=3.316;HRun=0;HaplotypeScore=70.3505;InbreedingCoeff=0.8405;MQ=59.68;MQ0=4;MQRankSum=1.711;QD=53.35;ReadPosRankSum=0.495;VQSLOD=4.6491;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.23:0,87,1394	0/0:7,0:7:18.06:0,18,307	./.	0/0:25,0:7:12.51:0,13,167	0/0:27,0:27:72.25:0,72,1220	0/0:21,0:21:51.13:0,51,791	0/0:7,0:7:21.07:0,21,358	0/0:35,0:35:66.18:0,66,1004	0/0:16,0:16:45.14:0,45,740	0/0:24,0:24:63.21:0,63,1036	0/0:26,0:26:72.25:0,72,1225	0/0:13,0:13:30.09:0,30,481	0/0:9,0:9:21.07:0,21,358	0/0:9,0:9:24.07:0,24,378	0/0:9,0:9:24.07:0,24,382	0/0:10,0:10:30.09:0,30,486	0/0:18,0:18:42.14:0,42,709	1/1:5,17:22:51.18:1268,51,0	0/0:17,0:17:44.98:0,45,730	0/0:12,0:12:27.08:0,27,428	0/0:4,0:4:12.01:0,12,175	0/0:2,0:2:6.02:0,6,102	0/0:13,0:13:30.10:0,30,512	0/0:9,0:9:24.08:0,24,409	0/0:19,0:19:48.15:0,48,792	0/0:26,0:26:66.21:0,66,1076	0/0:22,0:21:57.16:0,57,918	0/0:28,0:28:66.23:0,66,1125
chr10	96921665	.	AGT	A	72.50	PASS	AB=0.884;AC=6;AF=0.107;AN=56;BaseQRankSum=5.524;DP=367;FS=33.391;HRun=0;HaplotypeScore=56.4169;InbreedingCoeff=-0.1278;MQ=62.04;MQ0=21;MQRankSum=-5.180;QD=1.42;ReadPosRankSum=1.632;VQSLOD=0.1495;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,1:17:9.28:0,9,445	0/1:3,2:5:11.07:45,0,11	0/0:67,0:17:22.54:0,23,409	0/0:51,0:16:32.11:0,32,344	0/0:6,0:5:13.13:0,13,134	0/0:8,1:9:22.35:0,22,337	0/1:5,1:6:9.39:9,0,142	0/1:19,1:18:64:64,0,404	0/0:8,0:8:19.72:0,20,291	0/0:5,0:5:15.05:0,15,266	0/0:12,0:12:23.60:0,24,293	0/1:5,2:7:38.84:39,0,119	0/0:7,1:8:18.64:0,19,302	0/1:8,0:8:23.06:23,0,72	0/1:5,0:5:11.16:11,0,134	0/0:13,0:12:8.81:0,9,341	0/0:26,0:25:10.68:0,11,647	0/0:12,0:12:32.91:0,33,441	0/0:9,0:9:17.58:0,18,257	0/0:6,0:6:18.01:0,18,244	0/0:5,0:5:11.39:0,11,185	0/0:2,0:2:5.61:0,6,52	0/0:5,0:4:9.03:0,9,142	0/0:10,0:10:9.61:0,10,106	0/0:3,1:3:0.28:0,0,38	0/0:17,0:17:48.08:0,48,753	0/0:13,1:14:29.30:0,29,408	0/0:7,0:7:21:0,21,290
chr10	96922231	.	C	CT	828.28	PASS	AB=0.853;AC=10;AF=0.179;AN=56;BaseQRankSum=-4.952;DP=549;FS=1.175;HRun=12;HaplotypeScore=65.3175;InbreedingCoeff=0.2027;MQ=69.57;MQ0=2;MQRankSum=1.185;QD=4.68;ReadPosRankSum=-0.622;VQSLOD=1.2146;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,29:40:33.63:591,34,0	0/1:7,2:9:37.46:37,0,88	0/0:10,0:9:11.73:0,12,75	0/0:12,0:11:9.20:0,9,43	0/0:21,1:24:21.45:0,21,295	0/1:21,4:25:23.63:24,0,166	0/0:14,1:17:7.66:0,8,197	0/0:20,1:24:18.63:0,19,271	0/0:15,0:15:17.71:0,18,129	0/0:19,1:21:11.58:0,12,238	0/0:15,1:16:0.59:0,1,168	0/0:12,0:12:17.49:0,17,129	0/0:14,0:16:30.87:0,31,207	0/0:13,0:13:17.78:0,18,131	0/0:16,0:15:30.25:0,30,219	1/1:6,15:21:8.14:241,8,0	0/0:27,0:28:58.06:0,58,413	0/0:18,0:18:32.74:0,33,239	0/0:16,0:16:26.78:0,27,197	0/1:12,4:18:7.30:7,0,99	0/0:23,0:25:51.69:0,52,359	0/1:16,1:23:11.40:11,0,168	0/0:20,2:22:12.47:0,12,253	0/1:16,1:20:13.17:13,0,218	0/0:15,0:16:31.79:0,32,225	0/0:19,0:21:33.82:0,34,229	0/0:26,0:29:48.63:0,49,333	0/1:15,4:19:51.70:52,0,161
chr10	96924926	.	TAC	T	164.20	PASS	AB=0.959;AC=16;AF=0.381;AN=42;BaseQRankSum=3.208;DP=397;FS=0.000;HRun=0;HaplotypeScore=55.9066;InbreedingCoeff=-0.0207;MQ=58.44;MQ0=18;MQRankSum=0.793;QD=1.14;ReadPosRankSum=0.618;VQSLOD=1.2689;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/1:14,0:14:22.69:23,0,77	0/0:18,0:17:14.91:0,15,127	0/1:17,0:17:22.81:23,0,55	./.	0/1:12,0:12:5.35:5,0,100	0/0:14,0:13:5.69:0,6,53	0/0:10,0:9:5.97:0,6,46	0/1:14,1:14:14.28:14,0,85	0/1:7,1:6:19.77:20,0,117	0/0:11,0:12:9.03:0,9,126	1/1:7,0:9:2.84:14,3,0	0/0:16,0:16:6.86:0,7,54	0/1:19,2:21:59.16:59,0,166	1/1:9,3:10:3.01:31,3,0	1/1:11,0:10:3.01:32,3,0	./.	0/0:26,0:26:17.93:0,18,174	./.	0/1:8,0:7:25.79:26,0,38	0/0:19,0:20:9.02:0,9,114	0/0:8,0:8:6.02:0,6,87	0/0:19,0:19:23.38:0,23,260	0/1:12,1:13:25.79:26,0,38	1/1:2,0:3:5.68:28,6,0
chr10	96925194	.	GA	G	1135.65	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.869;DP=339;FS=13.882;HRun=10;HaplotypeScore=35.5815;InbreedingCoeff=0.9212;MQ=65.42;MQ0=3;MQRankSum=-3.207;QD=14.75;ReadPosRankSum=0.063;VQSLOD=1.8686;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:16:35.99:313,36,0	0/0:6,0:6:15.04:0,15,166	0/0:14,0:8:17.63:0,18,171	0/0:11,0:9:20.98:0,21,188	0/0:20,0:20:48.13:0,48,531	0/0:9,0:9:24.06:0,24,265	0/0:5,0:5:15.04:0,15,166	1/1:6,22:28:40.13:475,40,0	0/0:11,0:11:21.06:0,21,232	0/0:7,0:7:18.04:0,18,194	0/0:12,0:12:33.09:0,33,365	0/0:7,0:7:18.03:0,18,190	0/0:11,0:10:27.07:0,27,299	0/0:5,0:5:12.03:0,12,133	0/0:9,0:9:21.06:0,21,232	1/1:2,2:3:3:26,3,0	0/0:28,0:28:75.17:0,75,810	1/1:8,9:17:26.49:233,26,0	0/0:17,0:16:35.93:0,36,376	0/0:9,0:9:27.07:0,27,299	0/0:6,0:6:12.03:0,12,133	0/0:6,0:6:18.05:0,18,199	0/0:6,0:6:15.04:0,15,166	0/0:10,0:10:24.06:0,24,265	0/0:15,0:15:42.11:0,42,464	0/0:21,0:20:57.15:0,57,623	0/0:17,0:17:41.85:0,42,443	1/1:0,12:12:29.81:256,30,0
chr10	96925252	.	A	ATTAT	1245.69	PASS	AC=6;AF=0.125;AN=48;BaseQRankSum=-3.825;DP=254;FS=5.119;HRun=0;HaplotypeScore=41.7267;InbreedingCoeff=0.6337;MQ=70.37;MQ0=1;MQRankSum=2.031;QD=36.64;ReadPosRankSum=0.421;VQSLOD=3.0109;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,4:10:21.05:438,21,0	0/0:2,0:2:6.02:0,6,92	./.	./.	0/0:12,0:12:27.09:0,27,421	0/0:12,0:12:27.09:0,27,423	0/0:4,0:4:6.01:0,6,73	0/0:22,0:22:23.11:0,23,331	0/0:4,0:4:6.01:0,6,70	0/0:7,0:7:15.05:0,15,234	0/0:9,0:9:15.04:0,15,218	0/0:3,0:3:6.02:0,6,96	0/0:6,0:6:6.02:0,6,96	0/0:4,0:4:6.02:0,6,96	0/0:9,0:9:12.04:0,12,192	1/1:0,1:1:3.01:72,3,0	0/0:29,0:29:53.92:0,54,826	1/1:6,15:22:36.12:861,36,0	0/0:20,0:20:36.12:0,36,565	0/0:4,0:4:6.02:0,6,96	0/0:3,0:3:9.03:0,9,144	./.	./.	0/0:5,0:5:3.01:0,3,37	0/0:15,0:15:27.07:0,27,387	0/0:11,0:12:21.04:0,21,289	0/0:16,0:16:21.07:0,21,336	0/0:11,0:11:15.05:0,15,240
chr10	96926062	.	TTAG	T	794.92	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.946;DP=602;FS=0.000;HRun=0;HaplotypeScore=83.6614;InbreedingCoeff=0.9533;MQ=92.45;MQ0=0;MQRankSum=-3.521;QD=33.12;ReadPosRankSum=-1.541;VQSLOD=3.2383;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,2701	0/0:5,0:5:12.04:0,12,284	0/0:25,0:25:68.42:0,68,1570	0/0:27,0:27:72.16:0,72,1371	0/0:13,0:13:39.11:0,39,841	0/0:23,0:23:66.21:0,66,1503	0/0:28,0:28:84.24:0,84,1800	1/1:0,19:18:48.10:757,48,0	0/0:27,0:27:78.25:0,78,1794	0/0:32,0:32:93.26:0,93,1993	0/0:11,0:11:30.10:0,30,707	0/0:28,0:28:84.23:0,84,1753	0/0:22,0:22:66.20:0,66,1467	0/0:15,0:15:45.15:0,45,1057	0/0:16,0:16:48.16:0,48,1133	0/0:17,0:17:51.04:0,51,1148	0/0:30,0:30:87.30:0,87,2022	0/0:20,0:20:60.21:0,60,1386	0/0:17,0:17:51.13:0,51,1023	0/0:16,0:16:45.13:0,45,969	0/0:40,0:40:99:0,117,2619	0/0:16,0:16:48.14:0,48,1027	0/0:15,0:15:39.11:0,39,824	0/0:32,0:32:90.29:0,90,2058	0/0:19,0:19:57.20:0,57,1343	0/0:23,0:23:69.24:0,69,1595	0/0:16,0:16:42.13:0,42,945	1/1:0,5:5:9.03:153,9,0
chr10	96926171	.	CGTGT	C	614.99	PASS	AB=0.888;AC=10;AF=0.192;AN=52;BaseQRankSum=5.417;DP=668;FS=1.780;HRun=0;HaplotypeScore=125.3162;InbreedingCoeff=0.7023;MQ=66.86;MQ0=18;MQRankSum=-3.136;QD=4.02;ReadPosRankSum=1.500;VQSLOD=2.5646;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,15:39:8.38:240,8,0	0/0:13,0:14:32.85:0,33,627	./.	./.	0/0:27,0:27:42.14:0,42,939	0/0:19,0:18:21.04:0,21,404	0/0:34,0:34:49.33:0,49,1074	1/1:29,0:26:0.47:1,0,0	0/0:14,0:14:27.06:0,27,514	0/0:28,0:28:34.91:0,35,686	0/0:14,0:16:14.47:0,14,361	0/0:23,0:26:41.32:0,41,682	0/0:18,0:20:35.52:0,36,595	0/0:10,0:13:14.75:0,15,203	0/0:23,0:23:33.10:0,33,662	1/1:12,6:18:10.04:229,10,0	0/0:23,0:23:42.14:0,42,943	0/1:15,1:20:9.03:140,0,9	0/0:18,0:20:23.74:0,24,352	0/0:15,0:15:16.56:0,17,285	0/0:33,0:33:42.34:0,42,721	0/0:26,0:27:35.84:0,36,686	0/0:13,0:14:14.79:0,15,274	0/0:34,2:35:18.47:0,18,1159	0/0:17,0:17:26.78:0,27,510	0/1:37,1:38:0.30:0,0,828	0/0:24,0:24:54.14:0,54,1085	1/1:1,0:7:15.01:138,15,0
chr10	96927152	.	TACACACACAC	T	61.22	PASS	AB=0.795;AC=4;AF=0.077;AN=52;BaseQRankSum=3.463;DP=479;FS=7.822;HRun=0;HaplotypeScore=132.3233;InbreedingCoeff=0.2523;MQ=51.99;MQ0=14;MQRankSum=-3.861;QD=0.76;ReadPosRankSum=-1.932;VQSLOD=1.8627;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,29:62:12:96,0,12	0/0:8,0:8:6.02:0,6,212	./.	./.	0/0:5,0:7:8.98:0,9,136	0/0:27,0:26:27.55:0,28,775	0/0:17,0:15:19.58:0,20,495	0/0:33,0:30:17.29:0,17,135	0/1:9,0:10:2.36:2,0,96	0/0:18,0:17:26.91:0,27,684	0/0:10,0:10:10.58:0,11,190	0/0:11,0:11:21.06:0,21,649	0/0:9,0:8:11.93:0,12,297	0/0:10,0:11:23.32:0,23,809	0/0:10,0:11:13.87:0,14,304	1/1:5,4:8:3.01:55,3,0	0/0:34,0:34:63.22:0,63,2093	0/0:17,0:17:28.52:0,29,768	0/0:15,0:14:12.78:0,13,238	0/0:17,0:17:26.90:0,27,562	0/0:43,0:43:72.66:0,73,2193	0/0:9,0:9:9.03:0,9,296	0/0:11,0:11:8.49:0,8,280	0/0:15,0:14:22.47:0,22,542	0/0:9,0:9:6.02:0,6,182	0/0:20,0:18:25.98:0,26,752	0/0:15,0:15:23.93:0,24,618	0/0:6,0:10:6.90:0,7,81
chr10	96928647	.	A	AG	256.11	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.533;DP=435;FS=2.230;HRun=0;HaplotypeScore=56.9391;InbreedingCoeff=0.6737;MQ=59.34;MQ0=17;MQRankSum=-1.242;QD=11.14;ReadPosRankSum=2.312;VQSLOD=4.0551;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:54.50:0,55,423	0/0:12,0:12:35.95:0,36,316	0/0:24,0:6:9.86:0,10,68	0/0:31,0:11:2.51:0,3,55	0/0:18,0:18:46.05:0,46,335	0/0:12,0:9:27.02:0,27,273	0/0:14,0:14:34.20:0,34,319	0/0:20,0:20:53.62:0,54,421	0/0:8,0:7:9.06:0,9,70	0/0:23,0:23:67.08:0,67,630	0/0:13,0:13:36.01:0,36,368	0/0:8,0:7:16.60:0,17,151	0/0:8,0:8:15.11:0,15,140	0/0:7,0:6:11.46:0,11,89	0/0:11,0:9:21:0,21,201	0/0:9,0:9:17.94:0,18,160	0/0:37,0:34:91.93:0,92,916	1/1:15,7:21:35.38:350,35,0	0/0:16,0:15:38.74:0,39,378	0/0:13,0:12:33.11:0,33,253	0/0:6,0:3:8.95:0,9,82	0/0:9,0:9:22.72:0,23,184	0/0:16,0:16:37.36:0,37,299	0/0:8,0:8:20.97:0,21,225	0/0:20,0:20:56.12:0,56,456	0/0:20,0:20:50.20:0,50,476	0/0:16,0:16:34.84:0,35,274	0/0:7,0:6:11.95:0,12,93
chr10	96928849	.	CACACACACACACACAG	C	153.44	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.930;DP=504;FS=6.423;HRun=0;HaplotypeScore=151.5432;InbreedingCoeff=0.6409;MQ=51.75;MQ0=48;MQRankSum=-1.012;QD=3.57;ReadPosRankSum=-2.574;VQSLOD=1.6393;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:32:6.80:110,7,0	0/0:5,0:5:9:0,9,190	0/0:30,0:10:27.48:0,27,261	0/0:35,0:16:27.58:0,28,391	0/0:10,0:10:18:0,18,339	0/0:19,0:14:24.02:0,24,541	0/0:27,0:24:53.92:0,54,1150	0/0:18,0:16:36.84:0,37,325	0/0:9,0:8:23.94:0,24,556	0/0:14,0:13:39.08:0,39,810	0/0:5,0:5:12.03:0,12,513	0/0:11,0:11:29.55:0,30,665	0/0:24,0:23:69.05:0,69,2009	0/0:14,0:11:21:0,21,707	0/0:19,0:17:39.12:0,39,774	1/1:1,9:10:2.98:142,3,0	0/0:24,0:23:59.19:0,59,2031	0/0:22,0:19:45.34:0,45,915	0/0:17,0:16:48.03:0,48,1439	0/0:12,0:7:15.05:0,15,673	0/0:48,0:46:92.96:0,93,3169	0/0:4,0:4:3.01:0,3,179	0/0:8,0:6:3.01:0,3,121	0/0:35,0:33:63.56:0,64,2439	0/0:12,0:10:27.05:0,27,976	0/0:16,0:15:44.94:0,45,1023	0/0:15,0:14:33.56:0,34,576	0/0:7,0:6:12.04:0,12,644
chr10	96929165	.	AAAG	A	537.75	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.003;DP=341;FS=5.772;HRun=0;HaplotypeScore=45.1898;InbreedingCoeff=0.6993;MQ=66.54;MQ0=1;MQRankSum=-0.538;QD=25.61;ReadPosRankSum=3.691;VQSLOD=2.6197;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:39.13:600,39,0	0/0:2,0:2:6.02:0,6,126	0/0:11,0:8:24.05:0,24,412	0/0:5,0:3:5.99:0,6,85	0/0:19,0:19:48.15:0,48,926	0/0:22,0:22:63.18:0,63,1199	0/0:10,0:10:30.09:0,30,593	0/0:41,0:41:99:0,111,2124	0/0:5,0:5:14.94:0,15,269	0/0:12,0:12:33.11:0,33,661	0/0:12,0:12:36.11:0,36,698	0/0:7,0:7:18.03:0,18,303	0/0:4,0:4:12.04:0,12,246	0/0:3,0:3:6.02:0,6,115	0/0:6,0:6:18.06:0,18,380	1/1:0,2:2:3.01:46,3,0	0/0:32,0:32:96.29:0,96,1864	0/0:17,0:17:38.99:0,39,650	0/0:24,0:23:62.95:0,63,994	0/0:13,0:13:39.12:0,39,762	0/0:4,0:4:9.03:0,9,168	0/0:6,0:6:18.05:0,18,340	0/0:6,0:6:18.05:0,18,340	0/0:4,0:4:12.01:0,12,174	0/0:18,0:18:54.12:0,54,901	0/0:14,0:14:39.13:0,39,779	0/0:15,0:14:45.14:0,45,909	0/0:8,0:8:21.07:0,21,442
chr10	96929687	.	C	CCGAGGGAGAGCCCT	2508.55	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.092;DP=601;FS=0.000;HRun=0;HaplotypeScore=232.4885;InbreedingCoeff=0.8718;MQ=82.15;MQ0=0;MQRankSum=-6.150;QD=52.26;ReadPosRankSum=-3.168;VQSLOD=2.3963;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,5:27:24.08:1570,24,0	0/0:7,0:7:6.02:0,6,236	0/0:19,0:19:8.76:0,9,127	0/0:19,0:19:11.07:0,11,285	0/0:23,0:23:45.15:0,45,1672	0/0:22,0:22:48.15:0,48,1778	0/0:24,0:24:45.14:0,45,1430	0/0:26,0:26:22.32:0,22,898	0/0:26,0:26:48.16:0,48,1886	0/0:25,0:25:51.18:0,51,1901	0/0:14,0:14:21.07:0,21,803	0/0:17,0:17:30.10:0,30,1095	0/0:16,0:16:21.07:0,21,800	0/0:17,0:17:36.12:0,36,1234	0/0:22,0:22:36.12:0,36,1340	1/1:16,3:20:18.06:1057,18,0	0/0:39,0:39:93.32:0,93,3576	0/0:30,0:30:57.20:0,57,2156	0/0:18,0:18:12.04:0,12,451	0/0:18,0:18:30.10:0,30,1089	0/0:38,0:38:78.19:0,78,2594	0/0:17,0:17:24.08:0,24,877	0/0:17,0:17:25.35:0,25,842	0/0:24,0:24:48.16:0,48,1889	0/0:18,0:18:39.11:0,39,1409	0/0:29,0:29:57.18:0,57,2113	0/0:18,0:18:36.10:0,36,1277	0/0:10,0:10:15.05:0,15,590
chr10	96930020	.	TA	T	522.88	PASS	AB=0.914;AC=9;AF=0.161;AN=56;BaseQRankSum=3.718;DP=499;FS=1.126;HRun=15;HaplotypeScore=57.4253;InbreedingCoeff=0.3409;MQ=75.17;MQ0=0;MQRankSum=-0.760;QD=3.90;ReadPosRankSum=0.258;VQSLOD=0.2746;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:32:65.49:0,65,416	0/1:5,1:6:10.27:10,0,41	0/1:22,0:14:3.68:4,0,52	0/1:17,0:14:7.31:7,0,72	0/0:7,0:10:17.64:0,18,127	0/0:18,3:22:15.27:0,15,362	0/0:7,1:12:7.09:0,7,143	1/1:7,22:29:38.63:376,39,0	0/0:16,2:18:19.40:0,19,278	0/0:25,0:27:37.67:0,38,333	0/0:17,0:18:32.77:0,33,265	0/0:13,1:14:18.22:0,18,262	0/0:10,0:13:29.49:0,29,222	0/0:11,0:11:26.97:0,27,230	0/0:19,0:19:38.81:0,39,323	0/0:5,0:15:25.98:0,26,152	0/0:17,1:18:25.71:0,26,346	0/0:4,0:13:31.58:0,32,179	0/1:21,4:23:23.88:24,0,292	0/0:16,1:18:25.52:0,26,328	0/0:17,1:18:17.57:0,18,259	0/0:6,0:6:15:0,15,132	0/0:10,3:14:7.54:0,8,171	0/1:14,3:17:15.83:16,0,240	0/0:25,0:27:62.49:0,62,511	0/0:21,0:23:10.22:0,10,178	0/0:15,0:16:38.83:0,39,331	1/1:4,14:18:35.42:231,35,0
chr10	96931168	.	T	TC	67.13	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.879;DP=589;FS=3.626;HRun=0;HaplotypeScore=87.2284;InbreedingCoeff=0.7539;MQ=51.47;MQ0=20;MQRankSum=-0.025;QD=2.24;ReadPosRankSum=-1.460;VQSLOD=2.4663;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:72.83:0,73,481	0/0:7,0:7:14.90:0,15,120	0/0:51,0:9:11.95:0,12,74	0/0:50,0:13:6.80:0,7,70	0/0:34,0:34:80.25:0,80,590	0/0:17,0:16:44.92:0,45,406	0/0:15,0:14:37.55:0,38,334	0/0:33,0:31:36.76:0,37,464	0/0:6,0:6:17.95:0,18,153	0/0:22,0:22:57.52:0,58,458	0/0:30,0:28:71.99:0,72,548	0/0:12,0:12:12.68:0,13,103	0/0:14,0:13:35.35:0,35,293	0/0:15,0:15:40.48:0,40,281	0/0:17,0:17:45.12:0,45,320	0/0:10,0:10:29.29:0,29,199	0/0:27,0:26:50.91:0,51,420	1/1:11,15:30:12.56:153,13,0	0/0:13,0:13:37.41:0,37,321	0/0:30,0:30:63.16:0,63,468	0/0:9,0:9:21.87:0,22,150	0/0:6,0:6:14.51:0,15,127	0/0:10,0:10:19.88:0,20,153	0/0:15,0:15:34.55:0,35,278	0/0:21,0:20:8.26:0,8,174	0/0:25,0:24:67.65:0,68,496	0/0:32,0:32:86.56:0,87,765	0/0:7,0:6:17.93:0,18,143
chr10	96932688	.	AAAG	A	808.83	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.359;DP=532;FS=0.853;HRun=0;HaplotypeScore=72.3570;InbreedingCoeff=0.7510;MQ=74.97;MQ0=0;MQRankSum=-2.237;QD=36.76;ReadPosRankSum=-0.644;VQSLOD=3.7535;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.27:0,84,1794	0/0:11,0:11:33.10:0,33,681	0/0:18,0:18:1.31:0,1,821	0/0:9,0:9:19.77:0,20,441	0/0:22,0:22:48.16:0,48,1047	0/0:25,0:25:72.23:0,72,1534	0/0:22,0:22:66.23:0,66,1442	0/0:27,0:27:75.26:0,75,1640	0/0:13,0:13:39.13:0,39,852	0/0:31,0:31:81.28:0,81,1771	0/0:23,0:23:53.99:0,54,1133	0/0:14,0:14:42.14:0,42,919	0/0:19,0:19:48.16:0,48,1048	0/0:15,0:15:45.15:0,45,965	0/0:19,0:19:57.20:0,57,1247	0/0:6,0:6:12.04:0,12,262	0/0:29,0:29:81.24:0,81,1655	1/1:1,21:22:57.19:903,57,0	0/0:21,0:21:63.22:0,63,1351	0/0:18,0:18:48.16:0,48,1050	0/0:13,0:13:39.13:0,39,852	0/0:11,0:11:33.08:0,33,677	0/0:24,0:24:60.21:0,60,1310	0/0:27,0:27:78.27:0,78,1706	0/0:10,0:10:18.06:0,18,393	0/0:20,0:20:60.21:0,60,1301	0/0:30,0:29:90.31:0,90,1967	0/0:3,0:3:9.03:0,9,197
chr10	96932983	.	A	AT	377.73	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-0.045;DP=467;FS=1.865;HRun=8;HaplotypeScore=76.4624;InbreedingCoeff=0.5627;MQ=68.23;MQ0=3;MQRankSum=-0.680;QD=8.39;ReadPosRankSum=-3.163;VQSLOD=1.0811;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:96.01:0,96,870	0/0:12,0:12:21:0,21,190	0/0:13,0:6:3:0,3,27	0/1:18,0:13:14.53:15,0,98	0/0:17,0:17:38.66:0,39,357	0/0:12,0:12:27.01:0,27,247	0/0:19,0:19:33.99:0,34,326	1/1:8,12:20:41.93:445,42,0	0/0:9,0:9:11.99:0,12,110	0/0:29,0:29:72.02:0,72,658	0/0:12,0:12:26.99:0,27,246	0/0:17,0:17:23.84:0,24,215	0/0:15,0:14:23.95:0,24,219	0/0:11,0:11:8.81:0,9,82	0/0:9,0:9:8.94:0,9,80	0/0:9,0:9:17.98:0,18,159	0/0:35,0:35:38.32:0,38,355	0/0:25,0:25:41.98:0,42,384	0/0:18,0:18:38.99:0,39,350	0/0:17,0:17:38.98:0,39,357	0/0:13,0:13:24:0,24,219	0/0:7,0:7:15:0,15,135	0/0:12,0:12:6.90:0,7,79	0/0:24,0:24:48.01:0,48,439	0/0:10,0:10:20.98:0,21,186	0/0:19,0:19:32.93:0,33,301	0/0:18,0:18:35.94:0,36,320	1/1:5,2:6:3.01:35,3,0
chr10	96933111	.	T	TCC	179.29	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.974;DP=485;FS=0.000;HRun=7;HaplotypeScore=61.5364;InbreedingCoeff=0.9109;MQ=87.18;MQ0=1;MQRankSum=-2.575;QD=9.44;ReadPosRankSum=-0.453;VQSLOD=-0.5718;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.25:0,96,1096	0/0:4,0:4:9.02:0,9,105	0/0:23,0:23:47.56:0,48,508	0/0:21,0:20:45.12:0,45,521	0/0:21,0:21:57.10:0,57,618	0/0:18,0:18:51.13:0,51,581	0/0:24,0:24:60.16:0,60,687	0/0:24,0:24:60.05:0,60,646	0/0:20,0:20:57.15:0,57,653	0/0:18,0:18:45.12:0,45,523	0/0:14,0:14:33.09:0,33,384	0/0:14,0:14:33.07:0,33,374	0/0:11,0:11:33.08:0,33,373	0/0:9,0:9:18.03:0,18,198	0/0:14,0:14:35.98:0,36,390	0/0:13,0:13:33.08:0,33,374	0/0:30,0:30:84.18:0,84,942	1/1:6,11:19:23.86:273,24,0	0/0:11,0:11:33.10:0,33,384	0/0:11,0:11:27.05:0,27,303	0/0:32,0:32:78.17:0,78,884	0/0:9,0:9:21.04:0,21,233	0/0:9,0:9:21.04:0,21,234	0/0:27,0:27:72.18:0,72,815	0/0:10,0:10:24.07:0,24,280	0/0:24,0:24:57.15:0,57,655	0/0:13,0:13:30.07:0,30,349	0/0:6,0:6:15.04:0,15,175
chr10	96934384	.	T	TA	800.85	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-4.840;DP=392;FS=5.340;HRun=13;HaplotypeScore=45.7433;InbreedingCoeff=0.7513;MQ=66.09;MQ0=6;MQRankSum=0.442;QD=9.53;ReadPosRankSum=-0.753;VQSLOD=2.0990;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:23:11.62:280,12,0	0/0:4,0:4:5.91:0,6,41	0/0:15,0:9:7.76:0,8,31	0/0:14,0:9:6.42:0,6,50	0/0:21,0:20:24.33:0,24,279	0/0:15,0:16:35.98:0,36,235	0/0:14,0:14:34.49:0,34,229	1/1:10,13:22:23.94:270,24,0	0/0:10,0:10:23.77:0,24,164	0/0:18,0:19:34.51:0,35,225	0/0:10,0:12:21.85:0,22,135	0/0:7,0:7:14.87:0,15,103	0/0:7,0:7:11.88:0,12,82	0/0:5,0:5:5.89:0,6,41	0/0:10,0:10:24.98:0,25,165	1/1:2,7:8:9.01:84,9,0	0/0:23,0:25:50.28:0,50,321	1/1:4,13:18:10.64:241,11,0	0/0:22,0:21:38.36:0,38,265	0/0:13,0:13:26.74:0,27,185	0/0:13,0:13:23:0,23,141	0/0:4,0:4:5.93:0,6,40	0/0:13,1:15:1.11:0,1,131	0/0:14,0:14:20.78:0,21,144	0/0:9,0:10:22.86:0,23,150	0/0:15,1:16:1.81:0,2,156	0/0:20,0:20:56.46:0,56,389	1/1:7,4:9:9.01:84,9,0
chr10	96935081	.	A	AC	5325.62	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-15.052;DP=670;FS=3.807;HRun=1;HaplotypeScore=60.3462;InbreedingCoeff=0.9990;MQ=83.71;MQ0=0;MQRankSum=-4.239;QD=42.27;ReadPosRankSum=-0.055;VQSLOD=5.1509;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,47:47:99:1999,135,0	0/0:9,0:9:27.05:0,27,331	0/0:21,0:21:57.18:0,57,728	0/0:18,0:18:50.64:0,51,608	0/0:41,0:41:99:0,120,1538	0/0:28,0:28:81.26:0,81,1052	0/0:26,0:26:75.23:0,75,958	1/1:0,24:24:72.21:1037,72,0	0/0:23,0:23:69.21:0,69,882	0/0:25,0:25:72.23:0,72,932	0/0:22,0:22:66.17:0,66,838	0/0:21,0:21:63.20:0,63,816	0/0:16,0:16:45.15:0,45,584	0/0:9,0:9:27.05:0,27,333	0/0:20,0:20:57.18:0,57,738	1/1:1,21:22:63.21:943,63,0	0/0:33,0:33:96.31:0,96,1246	1/1:0,24:24:66.22:989,66,0	0/0:28,0:28:75.24:0,75,974	0/0:27,0:27:81.26:0,81,1051	0/0:27,0:27:78.19:0,78,976	0/0:24,0:24:69.22:0,69,895	0/0:23,0:23:60.19:0,60,779	0/0:20,0:20:57.19:0,57,740	0/0:21,0:21:63.20:0,63,818	0/0:28,0:28:81.26:0,81,1052	0/0:34,0:33:99:0,99,1282	1/1:0,9:9:24.08:358,24,0
chr10	96935488	.	A	ATG	708	PASS	AB=0.914;AC=3;AF=0.054;AN=56;BaseQRankSum=3.751;DP=946;FS=25.488;HRun=0;HaplotypeScore=141.8659;InbreedingCoeff=-0.0566;MQ=53.27;MQ0=30;MQRankSum=-6.804;QD=9.70;ReadPosRankSum=-3.343;VQSLOD=1.4558;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,129,1929	0/0:16,0:16:39.10:0,39,582	0/0:59,0:20:32.49:0,32,673	0/0:60,0:18:47.83:0,48,728	0/0:24,0:24:63.16:0,63,940	0/0:25,0:25:72.20:0,72,1085	0/0:24,0:22:60.19:0,60,928	0/1:34,16:46:99:612,0,883	0/0:35,0:35:93.27:0,93,1444	0/0:44,0:40:99:0,111,1683	0/0:16,0:16:43.03:0,43,677	0/0:26,0:26:72.22:0,72,1116	0/0:24,0:24:66.18:0,66,982	0/0:27,0:26:56.55:0,57,848	0/0:39,0:38:99:0,99,1534	0/0:30,0:30:60.07:0,60,921	0/0:34,0:34:84.75:0,85,1330	0/1:11,0:11:54.09:54,0,290	0/0:22,0:21:58.03:0,58,833	0/0:36,0:36:96.26:0,96,1452	0/0:95,0:91:99:0,214,3333	0/0:23,0:23:69.20:0,69,1028	0/0:28,0:27:69.19:0,69,1046	0/0:59,0:59:99:0,146,2248	0/0:18,0:18:51.13:0,51,773	0/0:35,0:34:99:0,102,1587	0/0:22,0:21:63.21:0,63,986	0/1:10,0:10:99:142,0,183
chr10	96935504	.	GCA	G	76.37	PASS	AB=0.792;AC=2;AF=0.036;AN=56;BaseQRankSum=6.130;DP=985;FS=2.281;HRun=0;HaplotypeScore=143.0653;InbreedingCoeff=-0.0346;MQ=52.10;MQ0=38;MQRankSum=-2.823;QD=4.24;ReadPosRankSum=0.519;VQSLOD=3.1548;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:90.28:0,90,1443	0/0:15,0:15:39.05:0,39,611	0/0:67,0:13:30.10:0,30,491	0/0:66,0:11:16.97:0,17,273	0/0:25,0:25:66.23:0,66,1101	0/0:27,0:27:60.21:0,60,1007	0/0:24,0:21:42.13:0,42,664	0/0:55,0:40:64.73:0,65,1073	0/0:37,1:37:51.66:0,52,1370	0/0:41,1:39:62.45:0,62,1462	0/0:17,0:17:36.11:0,36,604	0/0:26,0:26:63.19:0,63,1005	0/0:28,0:27:69.15:0,69,1065	0/0:26,0:25:48.16:0,48,808	0/0:48,0:46:99:0,105,1747	0/0:36,0:36:83.79:0,84,1406	0/0:35,0:35:87.30:0,87,1435	0/1:11,0:11:9.15:9,0,77	0/0:22,0:19:32.82:0,33,540	0/0:38,0:38:58.04:0,58,1482	0/0:111,1:106:99:0,187,3632	0/0:24,0:24:69.22:0,69,1138	0/0:26,0:25:60.20:0,60,983	0/0:54,0:53:99:0,128,2103	0/0:20,0:20:51.17:0,51,854	0/0:34,0:33:87.72:0,88,1394	0/0:20,0:20:54.17:0,54,884	0/1:2,5:7:31.47:150,0,31
chr10	96935525	.	CAT	C	217.51	PASS	AB=0.950;AC=4;AF=0.071;AN=56;BaseQRankSum=7.425;DP=1044;FS=0.000;HRun=0;HaplotypeScore=150.8365;InbreedingCoeff=0.2385;MQ=50.80;MQ0=51;MQRankSum=-6.494;QD=2.94;ReadPosRankSum=-2.840;VQSLOD=2.1252;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,104,1712	0/0:14,0:14:33.08:0,33,543	0/0:52,0:8:23.87:0,24,253	0/0:62,0:10:20.77:0,21,213	0/0:28,0:28:74.89:0,75,1334	0/0:27,0:27:72.18:0,72,1282	0/0:31,0:28:78.09:0,78,1199	0/1:56,0:33:17.58:18,0,808	0/0:41,0:40:99:0,99,1679	0/0:47,0:40:99:0,107,1765	0/0:21,0:21:54.10:0,54,860	0/0:28,0:28:75.18:0,75,1308	0/0:32,0:31:81.22:0,81,1436	0/0:27,0:27:60.15:0,60,1037	0/0:53,0:51:99:0,141,2197	0/0:39,0:39:87.30:0,87,1830	0/0:34,0:34:60.73:0,61,1376	0/1:8,1:7:36.57:37,0,100	0/0:29,0:18:24.70:0,25,624	0/0:38,0:38:97.16:0,97,1692	0/0:122,0:112:99:0,263,4599	0/0:31,0:31:93.30:0,93,1702	0/0:25,0:24:60.48:0,60,1166	0/0:52,0:52:99:0,135,2223	0/0:18,0:18:51.15:0,51,914	0/0:46,0:41:99:0,103,1812	0/0:25,0:25:75.19:0,75,1275	1/1:1,8:9:0.01:262,0,0
chr10	96935566	.	A	AT	115.19	PASS	AB=0.792;AC=2;AF=0.036;AN=56;BaseQRankSum=5.835;DP=1131;FS=5.949;HRun=1;HaplotypeScore=146.1357;InbreedingCoeff=-0.0321;MQ=51.90;MQ0=35;MQRankSum=-5.402;QD=2.81;ReadPosRankSum=-0.524;VQSLOD=-0.4964;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:78.14:0,78,1044	0/0:11,0:11:33.04:0,33,416	0/0:76,0:25:72.23:0,72,966	0/0:72,0:21:57.06:0,57,670	0/0:37,0:37:99:0,105,1446	0/0:35,3:38:99:0,99,1382	0/0:39,0:39:99:0,107,1437	0/0:77,0:69:99:0,106,1880	0/0:32,0:32:87.10:0,87,1153	0/0:47,0:43:99:0,120,1616	0/0:24,0:24:60.19:0,60,839	0/0:38,0:38:99:0,104,1382	0/0:40,0:40:99:0,115,1575	0/0:31,0:31:84.19:0,84,1129	0/0:47,0:48:99:0,138,1898	0/0:37,0:37:99:0,108,1382	0/0:28,0:29:78.23:0,78,1071	0/1:5,4:10:28.57:189,0,29	0/1:28,1:27:5.11:5,0,783	0/0:45,0:45:99:0,132,1827	0/0:114,1:112:99:0,285,3950	0/0:38,0:38:99:0,114,1575	0/0:24,0:24:72.24:0,72,1005	0/0:45,2:46:99:0,117,1628	0/0:22,0:22:57.19:0,57,795	0/0:40,0:39:63.03:0,63,1362	0/0:31,0:31:90.24:0,90,1186	0/0:8,0:8:11.99:0,12,168
chr10	96935664	.	TACAC	T	926.14	PASS	AB=0.945;AC=9;AF=0.167;AN=54;BaseQRankSum=2.739;DP=860;FS=4.488;HRun=0;HaplotypeScore=172.4569;InbreedingCoeff=0.3431;MQ=51.36;MQ0=28;MQRankSum=1.954;QD=4.41;ReadPosRankSum=-0.101;VQSLOD=2.6509;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,21:52:36.12:507,36,0	0/0:13,0:15:26.53:0,27,419	./.	0/0:12,0:3:2.98:0,3,21	0/0:16,0:22:23.76:0,24,411	0/1:19,1:20:20.57:21,0,395	0/0:41,0:37:40.44:0,40,798	0/0:70,0:53:39.40:0,39,379	0/0:30,0:30:57.19:0,57,1267	0/0:33,0:33:23.26:0,23,997	0/0:21,0:22:19.02:0,19,834	0/0:35,0:35:54.16:0,54,1166	0/0:29,0:28:47.33:0,47,957	0/0:30,0:30:38.96:0,39,975	0/0:33,0:36:48.86:0,49,675	1/1:19,12:32:33.10:495,33,0	0/1:23,0:24:9.97:10,0,396	0/0:23,0:22:25.48:0,25,366	0/1:20,1:13:23.39:23,0,378	0/0:27,0:26:27.14:0,27,480	0/0:81,0:77:99:0,110,2029	0/1:22,0:23:11.89:12,0,441	0/0:22,0:22:30.56:0,31,606	0/0:44,0:44:76.61:0,77,1591	0/0:28,0:28:35.93:0,36,699	0/1:34,0:31:1.37:1,0,587	0/0:28,0:28:43.10:0,43,788	0/0:7,0:10:9.50:0,10,165
chr10	96935898	.	GA	G	204.26	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=5.034;DP=443;FS=10.467;HRun=10;HaplotypeScore=45.0458;InbreedingCoeff=0.7098;MQ=53.84;MQ0=18;MQRankSum=-0.114;QD=11.35;ReadPosRankSum=1.141;VQSLOD=1.5333;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,2:48:73.23:0,73,1271	0/0:6,0:5:9.02:0,9,100	./.	0/0:4,0:1:3.01:0,3,33	0/0:18,0:18:44.49:0,44,472	0/0:13,0:13:36.02:0,36,371	0/0:20,0:20:54.14:0,54,594	0/0:21,0:16:41.36:0,41,395	0/0:13,0:11:24.06:0,24,265	0/0:12,0:12:33.09:0,33,361	0/0:11,0:11:28.79:0,29,302	0/0:13,0:12:24.05:0,24,257	0/0:11,0:10:17.49:0,17,286	0/0:10,0:10:18.01:0,18,184	0/0:18,0:18:48.13:0,48,531	0/0:19,0:19:51.14:0,51,564	0/0:34,0:32:87.16:0,87,924	1/1:1,15:18:37.07:298,37,0	0/0:29,0:23:59.65:0,60,639	0/0:11,0:12:6.74:0,7,240	0/0:20,0:19:38.93:0,39,412	0/0:14,0:14:33.05:0,33,348	0/0:6,0:6:11.56:0,12,122	0/0:18,0:18:45.12:0,45,498	0/0:16,0:16:48.10:0,48,520	0/0:17,0:17:48.11:0,48,513	0/0:12,0:12:30.55:0,31,333	0/0:6,0:6:15.04:0,15,166
chr10	96936119	.	G	GGT	88.88	PASS	AB=1.000;AC=5;AF=0.109;AN=46;BaseQRankSum=-1.452;DP=119;FS=10.956;HRun=0;HaplotypeScore=26.0935;InbreedingCoeff=0.1963;MQ=100.68;MQ0=1;MQRankSum=1.324;QD=7.41;ReadPosRankSum=0.313;VQSLOD=1.1981;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:7.76:0,8,47	0/0:1,0:1:3:0,3,27	0/0:27,0:18:22.51:0,23,209	0/0:18,0:14:22.40:0,22,154	0/0:3,0:3:6:0,6,51	0/0:2,0:2:6:0,6,51	0/0:1,0:1:2.94:0,3,18	1/1:0,4:4:12.01:147,12,0	0/0:2,0:2:6:0,6,54	0/0:2,0:2:2.98:0,3,21	0/0:2,0:2:2.97:0,3,20	./.	0/0:3,0:3:8.75:0,9,65	./.	0/0:4,0:4:8.89:0,9,58	0/0:6,0:6:15.87:0,16,129	0/0:4,0:4:8.79:0,9,55	0/1:6,0:6:36.05:36,0,38	./.	./.	0/0:5,0:5:9:0,9,79	0/0:4,0:4:0.92:0,1,18	0/0:3,0:3:5.97:0,6,47	0/0:5,0:5:11.94:0,12,92	1/1:2,0:2:0.47:1,0,0	0/0:2,0:2:2.98:0,3,21	0/0:1,0:1:3:0,3,26	./.
chr10	96936437	.	TA	T	629.02	PASS	AB=0.955;AC=8;AF=0.143;AN=56;BaseQRankSum=7.185;DP=519;FS=0.000;HRun=12;HaplotypeScore=59.9778;InbreedingCoeff=0.7451;MQ=72.60;MQ0=0;MQRankSum=-2.733;QD=8.50;ReadPosRankSum=0.561;VQSLOD=2.2791;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:33:54.91:0,55,732	0/1:5,0:5:8.19:8,0,107	0/0:13,0:10:13.56:0,14,99	0/0:21,0:17:23.17:0,23,164	0/0:18,0:18:45.01:0,45,431	0/0:17,0:17:36.06:0,36,360	0/0:18,0:18:45.09:0,45,457	1/1:6,18:24:53.76:416,54,0	0/0:18,0:18:36.07:0,36,365	0/0:19,0:22:50.73:0,51,465	0/0:11,0:11:27.05:0,27,272	0/0:14,0:14:32.93:0,33,320	0/1:9,1:10:5.20:5,0,134	0/0:24,0:24:56.98:0,57,527	0/0:22,1:23:39.88:0,40,575	0/0:23,0:23:63.11:0,63,629	0/0:25,0:25:69.08:0,69,677	1/1:2,0:24:32.59:94,33,0	0/0:24,0:26:69.80:0,70,666	0/0:10,0:10:30.06:0,30,305	0/0:27,0:28:65.78:0,66,625	0/0:13,0:13:29.51:0,30,272	0/0:15,0:15:36.07:0,36,363	0/0:15,0:15:39.08:0,39,396	0/0:13,0:13:30.05:0,30,300	0/0:21,0:21:51.09:0,51,513	0/0:24,0:24:54.06:0,54,531	1/1:0,11:11:32.87:255,33,0
chr10	96936528	.	TAC	T	871.66	PASS	AB=0.915;AC=17;AF=0.315;AN=54;BaseQRankSum=3.252;DP=590;FS=3.773;HRun=0;HaplotypeScore=73.1274;InbreedingCoeff=-0.2775;MQ=56.56;MQ0=18;MQRankSum=1.088;QD=2.46;ReadPosRankSum=0.264;VQSLOD=1.5822;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:22:23.78:0,24,260	0/0:6,0:10:12.01:0,12,122	0/0:42,0:17:0.94:0,1,1	./.	0/0:16,0:16:12.04:0,12,177	0/1:15,3:18:85.56:86,0,193	0/1:30,2:32:35.86:36,0,306	0/0:24,0:24:5.99:0,6,67	0/0:15,0:15:18.03:0,18,256	0/1:17,0:15:35.88:45,0,36	0/1:12,1:13:11.75:12,0,220	0/1:15,1:16:4.51:5,0,312	0/0:13,0:13:18.03:0,18,241	0/1:19,0:19:38.59:39,0,235	0/1:10,0:11:2.13:2,0,102	0/0:5,0:11:9:0,9,79	0/1:25,2:27:31.67:32,0,507	1/1:23,12:36:26.74:512,27,0	0/1:16,2:17:50.66:51,0,112	0/0:9,1:10:2.97:0,3,45	0/1:41,7:47:53.58:54,0,435	0/1:10,2:12:14.78:15,0,205	0/1:10,2:12:47.63:48,0,140	0/1:33,2:36:69.98:70,0,516	0/1:11,1:12:13.54:14,0,201	0/0:17,0:17:18.05:0,18,251	0/1:23,1:22:5.75:6,0,310	0/0:20,1:21:9.30:0,9,543
chr10	96937296	.	TAC	T	450.52	PASS	AB=0.909;AC=20;AF=0.400;AN=50;BaseQRankSum=6.124;DP=551;FS=5.070;HRun=0;HaplotypeScore=76.8869;InbreedingCoeff=-0.1365;MQ=65.82;MQ0=14;MQRankSum=0.110;QD=1.55;ReadPosRankSum=1.513;VQSLOD=1.2056;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:30:14.20:70,14,0	0/1:2,1:4:15.58:38,0,16	./.	./.	0/0:19,2:21:5.55:0,6,396	0/1:19,3:22:14.83:15,0,187	0/0:26,0:26:20.55:0,21,283	./.	0/0:15,0:16:6.92:0,7,244	0/0:18,0:18:20.25:0,20,222	0/1:7,1:8:20.69:21,0,122	0/1:12,2:14:5.66:6,0,319	0/1:16,0:16:4.32:4,0,285	0/1:15,0:15:10.28:10,0,240	0/1:23,1:25:24.29:24,0,290	1/1:12,0:21:19.58:96,20,0	0/1:12,5:18:8.77:9,0,235	0/1:14,6:20:2.53:157,0,3	0/1:17,0:17:20.55:21,0,157	0/1:11,1:12:20.88:21,0,71	0/0:43,0:41:35.17:0,35,516	0/0:9,0:8:9.03:0,9,126	0/1:10,0:9:17.50:18,0,130	0/0:32,1:34:4.27:0,4,566	0/1:22,0:22:10.66:11,0,318	0/1:20,0:20:31.87:32,0,214	0/0:18,0:18:18.49:0,18,227	1/1:4,0:11:11.36:56,11,0
chr10	96937508	.	CT	C	1167.68	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.749;DP=577;FS=8.812;HRun=9;HaplotypeScore=60.1118;InbreedingCoeff=0.9974;MQ=77.45;MQ0=0;MQRankSum=-1.942;QD=20.49;ReadPosRankSum=-2.699;VQSLOD=2.8678;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:20:53.99:0,54,603	0/0:11,0:11:33.10:0,33,381	0/0:27,0:25:48.65:0,49,513	0/0:17,0:12:20.98:0,21,223	0/0:35,0:35:93.28:0,93,1071	0/0:25,0:25:57.17:0,57,658	0/0:12,0:12:33.10:0,33,381	1/1:9,18:27:66:597,66,0	0/0:26,0:26:78.21:0,78,887	0/0:25,0:25:72.20:0,72,815	0/0:18,0:18:51.15:0,51,589	0/0:10,0:10:24.03:0,24,262	0/0:19,0:19:54.16:0,54,623	0/0:18,0:18:48.14:0,48,554	0/0:18,0:18:45.13:0,45,519	0/0:14,0:14:39.12:0,39,450	0/0:27,0:27:63.15:0,63,704	1/1:2,14:16:45.02:412,45,0	0/0:19,0:19:45.13:0,45,518	0/0:29,0:29:84.23:0,84,959	0/0:13,0:13:33.10:0,33,381	0/0:19,0:19:48.14:0,48,552	0/0:22,0:22:57.17:0,57,655	0/0:19,0:19:57.17:0,57,658	0/0:26,1:27:42.02:0,42,734	0/0:27,0:27:75.17:0,75,842	0/0:22,0:23:62.98:0,63,692	1/1:2,12:14:33.02:302,33,0
chr10	96937539	.	T	TA	1577.47	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=0.615;DP=570;FS=2.495;HRun=7;HaplotypeScore=58.5680;InbreedingCoeff=0.9144;MQ=70.70;MQ0=0;MQRankSum=-0.560;QD=25.44;ReadPosRankSum=-3.865;VQSLOD=2.4566;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.08:0,69,658	0/0:8,0:8:18.02:0,18,174	0/0:17,0:17:26.04:0,26,244	0/0:6,0:5:0.56:0,1,64	0/0:43,0:43:99:0,120,1134	0/0:24,0:24:72.07:0,72,677	0/0:13,0:13:36.04:0,36,341	1/1:7,27:34:87.19:980,87,0	0/0:28,0:28:84.11:0,84,801	0/0:23,0:23:63.09:0,63,605	0/0:19,0:19:54.07:0,54,515	0/0:11,0:11:30.03:0,30,284	0/0:18,0:18:54.07:0,54,515	0/0:20,0:20:57.08:0,57,546	0/0:17,0:17:48.07:0,48,459	0/0:14,0:14:39.04:0,39,370	0/0:23,0:23:69.05:0,69,650	1/1:4,10:14:30.09:362,30,0	0/0:19,0:19:42.03:0,42,398	0/0:33,0:33:96.12:0,96,916	0/0:11,0:11:27.04:0,27,261	0/0:17,0:17:51.08:0,51,492	0/0:22,0:22:63.10:0,63,608	0/0:23,0:23:66.08:0,66,630	0/0:23,0:24:69.11:0,69,664	0/0:25,0:25:75.12:0,75,721	0/0:24,0:24:66.03:0,66,621	1/1:3,10:14:32.97:377,33,0
chr10	96938068	.	T	TCTTA	4427.73	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.206;DP=702;FS=1.031;HRun=0;HaplotypeScore=112.3635;InbreedingCoeff=0.9983;MQ=85.85;MQ0=0;MQRankSum=-6.708;QD=65.11;ReadPosRankSum=-0.305;VQSLOD=6.8080;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,117,2114	0/0:8,0:8:21.07:0,21,391	0/0:18,0:18:51.17:0,51,919	0/0:29,0:29:78.27:0,78,1429	0/0:27,0:27:81.28:0,81,1510	0/0:17,0:17:48.16:0,48,895	0/0:31,0:31:93.29:0,93,1652	1/1:6,22:29:81.22:1862,81,0	0/0:25,0:25:75.24:0,75,1368	0/0:32,0:32:90.29:0,90,1618	0/0:12,0:12:36.11:0,36,639	0/0:32,0:32:84.27:0,84,1536	0/0:20,0:20:60.19:0,60,1063	0/0:25,0:25:72.25:0,72,1319	0/0:23,0:23:69.24:0,69,1273	0/0:20,0:20:60.21:0,60,1105	0/0:41,0:41:99:0,114,2112	1/1:1,16:18:39.13:1040,39,0	0/0:18,0:18:51.15:0,51,868	0/0:19,0:19:57.19:0,57,1035	0/0:43,0:43:99:0,120,2115	0/0:27,0:27:72.16:0,72,1241	0/0:11,0:11:30.09:0,30,526	0/0:43,0:43:99:0,114,2053	0/0:13,0:13:39.12:0,39,695	0/0:33,0:33:93.26:0,93,1582	0/0:24,0:24:72.23:0,72,1310	1/1:2,19:21:63.21:1526,63,0
chr10	96938423	.	AT	A	640.96	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.397;DP=368;FS=4.947;HRun=9;HaplotypeScore=32.3439;InbreedingCoeff=0.7017;MQ=58.08;MQ0=6;MQRankSum=-3.060;QD=16.87;ReadPosRankSum=-1.776;VQSLOD=2.5899;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.21:0,72,831	0/0:5,0:5:12.04:0,12,139	0/0:19,0:6:8.61:0,9,76	0/0:7,0:3:0.47:0,0,1	0/0:13,0:13:36.11:0,36,415	0/0:21,0:21:51.15:0,51,589	0/0:8,0:8:15.04:0,15,173	1/1:7,23:27:66.01:598,66,0	0/0:8,0:8:24.07:0,24,277	0/0:17,0:17:42.12:0,42,485	0/0:7,0:7:18.05:0,18,208	0/0:4,0:4:3.01:0,3,35	0/0:16,0:16:48.14:0,48,554	0/0:9,0:9:21.01:0,21,227	0/0:14,1:15:11.72:0,12,380	0/0:6,0:6:12.04:0,12,139	0/0:25,0:25:66.19:0,66,759	0/0:27,0:28:66.91:0,67,743	0/0:14,0:13:30.08:0,30,338	0/0:15,0:15:45.13:0,45,519	0/0:7,0:7:21.06:0,21,242	0/0:3,0:3:6.02:0,6,69	0/0:5,0:5:12.03:0,12,136	0/0:2,0:2:3.01:0,3,35	0/0:13,0:13:30.09:0,30,346	0/0:18,0:18:51.15:0,51,589	0/0:17,0:17:36.11:0,36,415	1/1:2,6:7:15.08:160,15,0
chr10	96938675	.	T	TC	67	PASS	AB=0.838;AC=4;AF=0.071;AN=56;BaseQRankSum=5.069;DP=501;FS=3.626;HRun=0;HaplotypeScore=66.6738;InbreedingCoeff=0.3560;MQ=59.31;MQ0=12;MQRankSum=-3.176;QD=2.03;ReadPosRankSum=-1.873;VQSLOD=1.9526;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:91.27:0,91,493	0/0:6,0:6:17.98:0,18,181	0/0:35,0:12:7.55:0,8,155	0/0:31,0:10:13.99:0,14,107	0/0:28,0:28:69.61:0,70,769	0/0:11,0:11:28.26:0,28,256	0/0:15,0:15:38.94:0,39,372	0/1:11,2:12:30.72:61,0,31	0/0:9,0:8:22.78:0,23,217	0/0:20,0:20:59.93:0,60,554	0/0:24,0:23:55.42:0,55,531	0/0:5,0:5:13.86:0,14,104	0/0:17,0:17:40.41:0,40,338	0/0:15,0:15:37.94:0,38,330	0/0:19,0:19:45.17:0,45,459	0/0:19,0:19:48.36:0,48,286	0/0:28,0:28:36.32:0,36,393	0/1:13,4:17:13.87:67,0,14	0/0:14,0:12:34.24:0,34,312	0/0:13,0:12:35.96:0,36,336	0/0:7,0:7:14.13:0,14,123	0/0:9,0:7:18:0,18,212	0/0:17,0:17:48.41:0,48,477	0/0:20,0:19:46.69:0,47,492	0/0:12,0:12:19.60:0,20,224	0/0:22,0:22:61.54:0,62,598	0/0:28,0:26:72.78:0,73,614	1/1:2,1:3:5.97:45,6,0
chr10	96938677	.	T	TC	1519.32	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.750;DP=494;FS=4.383;HRun=0;HaplotypeScore=64.1894;InbreedingCoeff=0.7819;MQ=59.50;MQ0=12;MQRankSum=1.063;QD=24.91;ReadPosRankSum=7.037;VQSLOD=4.1776;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,42:43:93.02:1068,93,0	0/0:6,0:6:17.98:0,18,179	0/0:36,0:12:1.66:0,2,153	0/0:26,0:9:5.94:0,6,72	0/0:28,0:28:71.17:0,71,778	0/0:11,0:11:28.23:0,28,250	0/0:14,0:14:38.93:0,39,371	0/0:13,0:12:16.44:0,16,63	0/0:9,0:8:22.35:0,22,215	0/0:19,0:19:56.96:0,57,541	0/0:24,0:23:58.30:0,58,549	0/0:5,0:5:14.07:0,14,104	0/0:16,0:16:37.49:0,37,316	0/0:15,0:15:37.68:0,38,320	0/0:19,0:19:44.45:0,44,463	1/1:0,18:18:48.15:572,48,0	0/0:28,0:28:31.25:0,31,353	0/0:18,0:18:35.74:0,36,171	0/0:13,0:12:34.23:0,34,312	0/0:13,0:12:35.96:0,36,336	0/0:7,0:7:11.49:0,11,97	0/0:9,0:7:17.81:0,18,199	0/0:17,0:17:50.91:0,51,501	0/0:21,0:20:49.69:0,50,518	0/0:12,0:12:19.60:0,20,224	0/0:22,0:22:64.55:0,65,627	0/0:29,0:27:73.68:0,74,617	0/0:3,0:3:5.90:0,6,37
chr10	96940030	.	T	TA	740.41	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.703;DP=476;FS=7.392;HRun=9;HaplotypeScore=62.2822;InbreedingCoeff=0.7715;MQ=74.51;MQ0=8;MQRankSum=-3.730;QD=18.98;ReadPosRankSum=-1.970;VQSLOD=3.0538;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:74.93:0,75,649	0/0:6,0:6:14.99:0,15,130	0/0:34,0:15:3.58:0,4,42	0/0:32,1:19:10.56:0,11,146	0/0:15,0:15:38.96:0,39,331	0/0:15,0:15:44.99:0,45,391	0/0:18,0:17:44.98:0,45,391	1/1:10,19:29:57.15:629,57,0	0/0:22,0:22:59.98:0,60,521	0/0:24,0:23:56.78:0,57,486	0/0:5,0:5:11.97:0,12,101	0/0:14,0:14:20.95:0,21,180	0/0:14,0:14:35.99:0,36,312	0/0:12,0:12:29.98:0,30,260	0/0:13,0:13:32.97:0,33,283	0/0:14,0:14:15.25:0,15,289	0/0:28,0:28:74.91:0,75,638	0/0:23,0:24:46.23:0,46,391	0/0:13,1:14:1.78:0,2,221	0/0:5,0:5:15:0,15,130	0/0:5,0:5:15:0,15,130	0/0:5,0:5:12:0,12,104	0/0:12,0:12:26.80:0,27,234	0/0:21,0:20:53.98:0,54,468	0/0:11,0:11:29.99:0,30,260	0/0:22,0:22:59.99:0,60,521	0/0:11,0:11:29.96:0,30,254	1/1:3,7:10:21.06:231,21,0
chr10	96940147	.	T	TTCTG	1360.24	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.574;DP=361;FS=25.931;HRun=0;HaplotypeScore=62.6164;InbreedingCoeff=0.9468;MQ=82.31;MQ0=1;MQRankSum=-4.848;QD=42.51;ReadPosRankSum=-1.377;VQSLOD=1.2040;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.29:0,96,1689	0/0:5,0:5:12.04:0,12,218	0/0:11,0:11:18.06:0,18,320	0/0:17,0:17:29.46:0,29,511	0/0:18,0:18:51.17:0,51,899	0/0:14,0:14:42.13:0,42,734	0/0:21,0:21:63.20:0,63,1116	1/1:10,14:24:33.11:853,33,0	0/0:9,0:9:24.08:0,24,436	0/0:9,0:9:27.09:0,27,484	0/0:7,0:7:18.06:0,18,311	0/0:7,0:7:18.06:0,18,327	0/0:9,0:9:27.07:0,27,458	0/0:6,0:6:18.06:0,18,327	0/0:12,0:12:36.12:0,36,650	0/0:4,0:4:12.04:0,12,218	0/0:27,0:27:78.23:0,78,1348	0/0:11,0:11:27.09:0,27,491	0/0:12,0:12:33.10:0,33,572	0/0:9,0:9:27.09:0,27,491	0/0:18,0:18:51.17:0,51,918	0/0:8,0:8:24.08:0,24,426	0/0:10,0:10:30.10:0,30,545	0/0:18,0:17:42.14:0,42,763	0/0:13,0:13:39.13:0,39,682	0/0:13,0:13:36.11:0,36,627	0/0:9,0:9:24.08:0,24,437	1/1:0,8:8:24.08:628,24,0
chr10	96940203	.	A	ATCT	1917.95	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-2.277;DP=324;FS=1.724;HRun=0;HaplotypeScore=47.0477;InbreedingCoeff=0.9602;MQ=87.66;MQ0=0;MQRankSum=-4.799;QD=54.80;ReadPosRankSum=-0.613;VQSLOD=5.1273;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.18:0,54,888	0/0:5,0:5:15.05:0,15,250	0/0:15,0:15:35.85:0,36,597	0/0:15,0:15:39.13:0,39,622	0/0:16,0:16:48.16:0,48,795	0/0:13,0:13:39.13:0,39,639	0/0:7,0:7:21.07:0,21,345	1/1:4,14:19:48.16:1060,48,0	0/0:11,0:11:33.11:0,33,550	0/0:14,0:14:36.12:0,36,599	0/0:9,0:9:24.08:0,24,400	0/0:9,0:9:24.08:0,24,400	0/0:4,0:4:12.04:0,12,200	0/0:7,0:7:21.07:0,21,350	0/0:11,0:11:30.10:0,30,500	0/0:5,0:5:15.05:0,15,250	0/0:25,0:25:75.24:0,75,1224	1/1:2,7:9:24.08:524,24,0	0/0:19,0:19:54.17:0,54,869	0/0:11,0:11:33.11:0,33,550	0/0:6,0:6:18.06:0,18,296	0/0:5,0:5:15.05:0,15,250	0/0:7,0:7:21.07:0,21,350	0/0:7,0:7:21.07:0,21,350	0/0:21,0:21:60.20:0,60,997	0/0:16,0:16:48.16:0,48,798	0/0:10,0:10:30.08:0,30,458	1/1:0,7:7:21.07:476,21,0
chr10	96940315	.	T	TGA	911.36	PASS	AB=0.833;AC=16;AF=0.320;AN=50;BaseQRankSum=-0.459;DP=450;FS=0.000;HRun=0;HaplotypeScore=72.5460;InbreedingCoeff=0.6278;MQ=54.71;MQ0=18;MQRankSum=-1.620;QD=5.21;ReadPosRankSum=-1.352;VQSLOD=2.3792;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:20:6.02:70,6,0	0/0:4,0:4:12:0,12,122	./.	./.	0/0:23,0:23:16.20:0,16,132	0/0:17,0:17:11.88:0,12,106	0/0:23,0:23:20.91:0,21,170	1/1:32,0:32:17.64:130,18,0	0/0:7,0:8:11.84:0,12,97	0/0:13,0:13:12.01:0,12,119	0/0:7,0:7:11.95:0,12,101	0/0:8,0:9:11.83:0,12,96	0/0:9,0:9:9.02:0,9,101	0/0:7,0:7:8.96:0,9,68	0/0:11,0:11:11.41:0,11,70	./.	0/1:12,12:24:12.66:251,0,13	1/1:8,0:7:8.22:39,8,0	0/0:14,0:13:5.23:0,5,41	1/1:11,0:11:8.96:69,9,0	0/1:24,0:24:52.19:137,0,52	0/0:9,0:11:11.68:0,12,86	0/0:9,0:11:11.84:0,12,96	0/0:21,0:21:17.95:0,18,150	0/0:18,0:20:20.71:0,21,189	1/1:19,0:19:3.19:116,3,0	1/1:19,0:19:5.65:195,6,0	1/1:16,0:13:13.17:74,13,0
chr10	96941187	.	CGTGT	C	607.88	PASS	AB=0.950;AC=26;AF=0.650;AN=40;BaseQRankSum=1.082;DP=464;FS=12.537;HRun=0;HaplotypeScore=76.3531;InbreedingCoeff=0.3358;MQ=70.53;MQ0=11;MQRankSum=-0.053;QD=3.09;ReadPosRankSum=2.076;VQSLOD=0.6689;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:38.80:0,39,627	1/1:6,0:7:3:28,3,0	./.	./.	1/1:10,2:12:6.02:91,6,0	1/1:16,0:16:3.01:45,3,0	1/1:18,0:18:6.01:65,6,0	./.	1/1:12,0:12:3:26,3,0	1/1:9,4:13:2.04:28,2,0	1/1:11,0:11:3:27,3,0	1/1:12,0:12:3:27,3,0	./.	1/1:10,5:15:3.01:46,3,0	1/1:10,2:12:9.02:119,9,0	0/0:11,0:16:9.02:0,9,185	0/0:21,0:19:0.47:0,0,1	0/1:19,1:18:36.68:37,0,162	./.	./.	0/0:44,0:44:2.24:0,2,11	1/1:3,0:3:3.01:45,3,0	./.	1/1:20,7:26:3.01:46,3,0	0/1:17,0:18:0.40:104,0,0	./.	0/0:9,0:9:1.82:0,2,5	0/0:12,0:10:24.08:0,24,501
chr10	96941403	.	TGCC	T	4035	PASS	AB=0.941;AC=11;AF=0.196;AN=56;BaseQRankSum=11.293;DP=519;FS=17.642;HRun=0;HaplotypeScore=75.2610;InbreedingCoeff=0.8573;MQ=66.02;MQ0=2;MQRankSum=-1.768;QD=29.89;ReadPosRankSum=2.331;VQSLOD=2.4639;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,23:28:45.15:690,45,0	0/0:3,0:3:2.97:0,3,20	0/1:15,1:13:6.94:7,0,535	0/0:15,0:16:18.01:0,18,296	0/0:9,0:9:21.04:0,21,367	0/0:11,0:11:30.10:0,30,638	0/0:36,0:36:99:0,102,2000	1/1:2,20:22:57.14:789,57,0	0/0:18,0:18:42.14:0,42,887	0/0:17,0:17:39.13:0,39,831	0/0:10,0:10:24.05:0,24,468	0/0:18,0:18:42.13:0,42,857	0/0:15,0:15:36.12:0,36,747	0/0:22,0:22:57.20:0,57,1215	0/0:17,0:17:48.10:0,48,974	1/1:1,17:18:48.16:736,48,0	0/0:30,0:30:84.20:0,84,1687	1/1:2,31:33:81.23:1216,81,0	0/0:13,0:13:36.12:0,36,736	0/0:7,0:7:18.06:0,18,383	0/0:54,0:53:99:0,135,2624	0/0:7,0:7:12.04:0,12,256	0/0:8,0:8:18.06:0,18,381	0/0:34,0:34:87.24:0,87,1750	0/0:12,0:12:27.02:0,27,529	0/0:15,0:15:42.02:0,42,765	0/0:12,0:12:30.10:0,30,639	1/1:1,17:18:39.13:598,39,0
chr10	96942154	.	TA	T	238.49	PASS	AB=1.000;AC=3;AF=0.056;AN=54;BaseQRankSum=5.688;DP=394;FS=11.981;HRun=10;HaplotypeScore=40.2352;InbreedingCoeff=0.5546;MQ=56.12;MQ0=17;MQRankSum=-1.004;QD=8.83;ReadPosRankSum=1.515;VQSLOD=0.5040;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:23:30.66:0,31,536	0/0:7,0:7:18.05:0,18,199	0/0:11,0:7:12.29:0,12,110	0/1:9,0:7:7.30:7,0,82	0/0:23,1:24:34.10:0,34,594	0/0:19,0:19:45.08:0,45,484	0/0:4,0:4:9.02:0,9,100	0/0:49,2:46:51.05:0,51,1010	0/0:7,0:7:18.05:0,18,199	0/0:22,1:22:31.09:0,31,565	0/0:12,0:12:33.09:0,33,365	0/0:6,0:5:15.04:0,15,166	0/0:9,0:9:27.05:0,27,289	./.	0/0:9,0:9:24.06:0,24,265	0/0:7,0:7:21.06:0,21,232	0/0:23,0:23:59.98:0,60,636	1/1:2,16:18:38.94:331,39,0	0/0:21,0:19:54.12:0,54,585	0/0:21,0:21:60.15:0,60,655	0/0:9,0:8:24.06:0,24,266	0/0:3,0:3:9.02:0,9,100	0/0:6,0:6:15.04:0,15,166	0/0:5,0:5:12.01:0,12,122	0/0:15,1:16:13.05:0,13,372	0/0:13,1:12:10.01:0,10,317	0/0:14,0:14:33.04:0,33,343	0/0:19,0:17:51.14:0,51,564
chr10	96943435	.	AG	A	714.97	PASS	AB=0.524;AC=3;AF=0.058;AN=52;BaseQRankSum=5.004;DP=455;FS=14.285;HRun=1;HaplotypeScore=53.1458;InbreedingCoeff=0.5848;MQ=39.86;MQ0=95;MQRankSum=1.458;QD=16.25;ReadPosRankSum=1.734;VQSLOD=2.2899;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:29:45.15:629,45,0	0/0:13,0:13:33.10:0,33,502	./.	./.	0/0:12,0:9:18.06:0,18,288	0/0:24,0:24:51.17:0,51,815	0/0:10,0:8:14.91:0,15,239	0/0:36,0:13:39.13:0,39,623	0/0:13,0:11:15.05:0,15,240	0/0:18,0:17:51.17:0,51,815	0/0:15,0:14:27.09:0,27,431	0/0:9,0:7:21.07:0,21,335	0/0:13,0:11:27.09:0,27,432	0/0:9,0:9:21.07:0,21,335	0/0:14,0:13:24.08:0,24,381	0/1:1,10:11:30.03:191,0,30	0/0:32,0:29:72.25:0,72,1150	0/0:22,0:19:42.10:0,42,643	0/0:18,0:9:27.09:0,27,430	0/0:12,0:11:33.11:0,33,526	0/0:25,0:9:18.06:0,18,288	0/0:10,0:8:12.04:0,12,191	0/0:8,0:7:18.06:0,18,287	0/0:12,0:8:12.04:0,12,192	0/0:11,0:11:20.75:0,21,335	0/0:17,0:16:48.16:0,48,767	0/0:19,0:19:45.15:0,45,717	0/0:14,0:10:18.06:0,18,288
chr10	96944805	.	T	TTG	2115.44	PASS	AB=0.765;AC=10;AF=0.179;AN=56;BaseQRankSum=-0.867;DP=623;FS=0.442;HRun=0;HaplotypeScore=78.6736;InbreedingCoeff=0.7414;MQ=70.39;MQ0=1;MQRankSum=0.882;QD=16.27;ReadPosRankSum=-2.312;VQSLOD=3.1876;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:40:60.70:335,0,61	0/0:11,0:11:32.97:0,33,427	0/1:22,0:20:8.42:8,0,358	0/0:25,0:21:31.77:0,32,482	0/0:29,0:29:76.06:0,76,1014	0/0:30,0:30:89.81:0,90,1105	0/0:23,0:23:63.20:0,63,913	1/1:2,19:21:53.99:631,54,0	0/0:29,0:29:87.14:0,87,1152	0/0:13,0:13:38.75:0,39,469	0/0:21,0:21:57.92:0,58,700	0/0:19,0:19:57.11:0,57,745	0/0:20,0:20:57.10:0,57,733	0/0:19,0:19:54.03:0,54,674	0/0:23,0:23:66.15:0,66,876	1/1:2,0:16:6.96:172,7,0	0/0:28,0:28:84.17:0,84,1131	1/1:1,18:19:42.14:791,42,0	0/0:20,0:20:30.04:0,30,642	0/0:10,0:10:30.03:0,30,407	0/0:33,0:33:93.16:0,93,1217	0/0:27,0:27:48.37:0,48,865	0/0:17,0:17:18.67:0,19,535	0/0:29,0:29:87.25:0,87,1220	0/0:10,0:10:30.02:0,30,372	0/0:28,0:28:78.26:0,78,1033	0/0:28,0:28:81.15:0,81,1081	1/1:0,9:9:18.06:339,18,0
chr10	96945150	.	CGT	C	568.47	PASS	AB=0.920;AC=19;AF=0.380;AN=50;BaseQRankSum=5.198;DP=574;FS=2.839;HRun=0;HaplotypeScore=77.8638;InbreedingCoeff=0.2366;MQ=65.47;MQ0=5;MQRankSum=0.485;QD=2.04;ReadPosRankSum=1.852;VQSLOD=1.7300;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,1:41:17.24:110,17,0	0/0:10,0:10:3.01:0,3,43	./.	./.	0/0:24,0:24:14.72:0,15,182	0/0:18,0:18:12.01:0,12,127	1/1:13,5:19:5.85:46,6,0	0/0:19,0:19:2.88:0,3,15	0/1:17,2:19:17.07:17,0,103	0/0:21,0:21:3:0,3,25	0/1:14,0:16:8.33:8,0,8	0/0:21,0:21:9:0,9,92	1/1:10,4:16:6.01:63,6,0	0/0:14,0:14:9:0,9,93	0/1:20,0:19:22.54:23,0,172	1/1:14,4:19:11.38:109,11,0	0/1:37,2:39:13.40:13,0,411	1/1:16,0:17:2.84:14,3,0	0/0:18,0:18:9:0,9,94	0/1:7,1:11:20.11:26,0,20	0/0:47,0:46:7.12:0,7,186	0/0:15,0:14:8.87:0,9,95	0/0:16,3:19:0.47:0,0,1	0/1:23,8:31:7.65:164,0,8	./.	0/1:17,0:17:3.12:3,0,62	0/0:13,0:18:9.46:0,9,76	1/1:8,5:12:12.03:128,12,0
chr10	96945617	.	GACAC	G	2017.15	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=9.141;DP=691;FS=4.277;HRun=0;HaplotypeScore=112.5869;InbreedingCoeff=0.9640;MQ=50.42;MQ0=81;MQRankSum=-2.445;QD=14.51;ReadPosRankSum=-0.103;VQSLOD=3.2652;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,9:35:59.28:907,59,0	0/0:12,0:9:23.82:0,24,437	./.	./.	0/0:28,0:25:51.17:0,51,1140	0/0:23,0:23:51.14:0,51,1095	0/0:30,0:26:41.97:0,42,899	1/1:20,12:29:28.16:497,28,0	0/0:23,0:21:53.93:0,54,1139	0/0:26,0:16:39.12:0,39,881	0/0:17,0:14:33.10:0,33,667	0/0:23,0:20:43.39:0,43,972	0/0:14,0:14:35.95:0,36,715	0/0:15,0:14:42.12:0,42,828	0/0:20,0:19:44.54:0,45,973	1/1:2,19:21:8.94:143,9,0	0/0:41,0:42:99:0,111,2405	1/1:8,21:27:8.95:403,9,0	0/0:12,0:9:20.96:0,21,382	0/0:15,0:9:21.07:0,21,503	0/0:67,0:60:99:0,113,2505	0/0:20,0:16:42.14:0,42,1065	0/0:12,0:12:30.05:0,30,628	0/0:50,0:48:99:0,111,2626	0/0:22,0:19:42.14:0,42,1035	0/0:47,0:31:79.38:0,79,1631	0/0:17,0:15:42.08:0,42,884	1/1:3,10:13:14.28:230,14,0
chr10	96945742	.	GGT	G	1084.48	PASS	AB=0.893;AC=20;AF=0.385;AN=52;BaseQRankSum=7.514;DP=615;FS=3.359;HRun=0;HaplotypeScore=81.1244;InbreedingCoeff=-0.2957;MQ=60.96;MQ0=12;MQRankSum=1.982;QD=2.65;ReadPosRankSum=0.558;VQSLOD=1.8101;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,17:40:38.44:360,38,0	0/1:10,2:12:46.48:46,0,208	./.	./.	0/1:15,0:15:8.98:9,0,268	0/0:23,0:25:31:0,31,598	0/1:18,3:22:48.61:49,0,334	0/0:18,0:19:26.89:0,27,270	0/1:13,2:15:40.48:40,0,264	0/0:24,0:23:30.10:0,30,441	0/0:23,0:23:30.10:0,30,455	0/0:15,0:15:18.99:0,19,408	0/1:11,2:13:12.25:12,0,228	0/1:14,1:15:40.45:40,0,293	0/1:22,4:26:78.03:78,0,601	1/1:8,10:18:18.05:203,18,0	0/1:29,5:33:35.11:35,0,799	0/1:16,6:23:99:124,0,361	0/1:14,1:13:24.76:25,0,81	0/1:21,3:24:43.50:43,0,230	0/1:23,3:26:34.48:34,0,374	0/0:10,0:10:15.05:0,15,227	0/1:20,1:20:12.72:13,0,252	0/1:30,3:33:29.12:29,0,866	0/1:20,2:23:25.51:26,0,441	0/1:27,6:33:80.94:81,0,584	0/0:13,0:13:18.06:0,18,275	0/0:6,0:12:12:0,12,105
chr10	96945924	.	CTCT	C	4608.93	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.359;DP=631;FS=6.535;HRun=0;HaplotypeScore=94.1780;InbreedingCoeff=1.0000;MQ=85.78;MQ0=0;MQRankSum=-4.012;QD=39.73;ReadPosRankSum=1.735;VQSLOD=5.8240;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:31:72.20:1146,72,0	0/0:14,0:14:39.13:0,39,860	0/0:26,0:25:65.40:0,65,1341	0/0:22,0:20:51.17:0,51,876	0/0:32,0:32:96.31:0,96,2052	0/0:24,0:24:60.20:0,60,1324	0/0:19,0:19:57.16:0,57,1173	1/1:4,20:24:60.16:944,60,0	0/0:26,0:26:69.24:0,69,1521	0/0:25,0:25:72.25:0,72,1583	0/0:28,0:28:81.26:0,81,1724	0/0:18,0:18:51.17:0,51,1103	0/0:13,0:13:39.12:0,39,814	0/0:22,0:22:66.23:0,66,1455	0/0:30,0:30:87.28:0,87,1856	1/1:1,19:20:57.16:902,57,0	0/0:23,0:23:57.16:0,57,1148	1/1:2,18:20:48.16:784,48,0	0/0:28,0:27:78.23:0,78,1542	0/0:22,0:22:63.19:0,63,1303	0/0:22,0:22:60.19:0,60,1281	0/0:16,0:16:48.16:0,48,1059	0/0:17,0:17:42.13:0,42,886	0/0:23,0:23:66.21:0,66,1414	0/0:21,0:21:60.21:0,60,1323	0/0:27,0:27:78.25:0,78,1642	0/0:17,0:17:49.34:0,49,899	1/1:2,19:21:51.17:833,51,0
chr10	96948646	.	CT	C	760.74	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.164;DP=590;FS=0.000;HRun=3;HaplotypeScore=58.6519;InbreedingCoeff=0.9911;MQ=82.79;MQ0=0;MQRankSum=-1.122;QD=31.70;ReadPosRankSum=-2.228;VQSLOD=2.5735;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1641	0/0:12,0:12:36.11:0,36,501	0/0:16,0:16:39.12:0,39,545	0/0:21,0:21:56.83:0,57,699	0/0:16,0:16:42.13:0,42,586	0/0:16,0:16:45.15:0,45,648	0/0:34,0:34:96.31:0,96,1366	1/1:0,19:19:57.17:693,57,0	0/0:43,0:43:99:0,123,1771	0/0:20,0:20:60.16:0,60,834	0/0:15,0:15:45.13:0,45,605	0/0:17,0:17:51.16:0,51,717	0/0:19,0:19:57.19:0,57,821	0/0:25,0:25:75.23:0,75,1037	0/0:23,0:23:69.23:0,69,994	0/0:25,0:25:69.23:0,69,993	0/0:40,0:39:99:0,117,1667	0/0:14,0:14:42.14:0,42,604	0/0:19,0:19:48.15:0,48,660	0/0:15,0:15:45.14:0,45,629	0/0:33,0:33:96.28:0,96,1326	0/0:12,0:12:30.10:0,30,432	0/0:10,0:10:30.07:0,30,395	0/0:27,0:27:78.22:0,78,1081	0/0:18,0:18:54.16:0,54,745	0/0:16,0:16:48.16:0,48,679	0/0:20,0:20:60.18:0,60,830	1/1:0,5:5:15.05:186,15,0
chr10	96949940	.	T	TG	537.07	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.276;DP=392;FS=0.000;HRun=8;HaplotypeScore=43.5597;InbreedingCoeff=0.3784;MQ=74.25;MQ0=0;MQRankSum=-0.101;QD=18.52;ReadPosRankSum=-0.617;VQSLOD=2.8439;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.04:0,78,714	0/0:4,0:4:8.93:0,9,72	0/0:10,0:10:4.77:0,5,59	0/1:5,0:5:18.99:19,0,45	0/0:6,0:6:11.99:0,12,110	0/0:13,0:13:27:0,27,247	0/0:24,0:24:57.01:0,57,522	0/0:10,0:10:8.99:0,9,82	0/0:12,0:12:33.01:0,33,302	0/0:11,0:11:21.01:0,21,192	0/0:10,0:10:14.98:0,15,137	0/0:11,0:11:24.01:0,24,220	0/0:8,0:8:20.81:0,21,177	0/0:14,0:14:32.99:0,33,297	0/0:4,0:4:6:0,6,55	0/0:6,0:6:15.01:0,15,137	0/0:26,0:26:66.02:0,66,603	1/1:3,21:24:54.16:622,54,0	0/0:11,0:11:23.98:0,24,211	0/0:3,0:3:3:0,3,27	0/0:56,0:56:99:0,153,1363	0/0:8,0:8:17.96:0,18,156	0/0:8,0:8:20.99:0,21,187	0/0:27,0:27:75:0,75,679	0/0:9,0:9:23.87:0,24,201	0/0:18,0:18:48.02:0,48,439	0/0:16,1:17:1.39:0,1,267	0/0:7,0:7:12:0,12,110
chr10	96951425	.	C	CT	3013.75	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-9.353;DP=440;FS=0.467;HRun=1;HaplotypeScore=51.3690;InbreedingCoeff=0.9719;MQ=88.56;MQ0=0;MQRankSum=-3.787;QD=35.46;ReadPosRankSum=1.437;VQSLOD=3.5627;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:84.24:1202,84,0	0/0:6,0:6:18.05:0,18,219	0/0:20,0:19:55.66:0,56,610	0/0:18,0:18:48.10:0,48,573	0/0:9,0:9:24.08:0,24,310	0/0:13,0:13:39.11:0,39,490	0/0:25,0:25:75.23:0,75,957	1/1:2,10:12:30.10:428,30,0	0/0:15,0:15:42.11:0,42,515	0/0:12,0:12:36.10:0,36,430	0/0:5,0:5:9.03:0,9,116	0/0:14,0:14:36.10:0,36,451	0/0:10,0:10:30.08:0,30,374	0/0:9,0:9:27.06:0,27,321	0/0:11,0:11:30.09:0,30,376	1/1:0,7:7:18.06:263,18,0	0/0:33,0:33:93.26:0,93,1173	1/1:0,28:28:72.24:1051,72,0	0/0:19,0:19:51.14:0,51,624	0/0:8,0:8:12.04:0,12,155	0/0:50,0:50:99:0,141,1767	0/0:9,0:9:27.09:0,27,350	0/0:9,0:9:24.08:0,24,310	0/0:20,0:20:57.16:0,57,722	0/0:10,0:10:30.08:0,30,375	0/0:18,0:18:54.14:0,54,647	0/0:12,0:12:30.03:0,30,341	1/1:1,7:8:18.05:244,18,0
chr10	96951506	.	T	TTCTC	729.50	PASS	AB=0.967;AC=37;AF=0.841;AN=44;BaseQRankSum=-0.387;DP=503;FS=0.000;HRun=0;HaplotypeScore=99.7157;InbreedingCoeff=0.0683;MQ=66.09;MQ0=19;MQRankSum=-1.309;QD=1.88;ReadPosRankSum=-2.010;VQSLOD=1.6337;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:27:0.07:18,0,0	0/1:7,0:7:0:0,0,0	./.	./.	./.	1/1:13,0:12:3:25,3,0	0/1:20,0:20:19.46:61,0,19	1/1:26,0:26:2.96:7,3,0	1/1:18,0:18:0.47:1,0,0	1/1:23,0:19:7.43:70,7,0	0/1:10,0:10:0:0,0,0	1/1:18,0:18:8.99:86,9,0	1/1:17,0:17:12.16:103,12,0	0/1:16,0:14:33.49:86,0,33	./.	1/1:11,0:10:0.47:1,0,0	0/1:22,0:22:5.20:5,0,16	./.	1/1:20,0:20:0.47:1,0,0	1/1:10,0:10:0.47:1,0,0	1/1:32,0:30:2.66:25,3,0	0/1:17,0:17:0:1,0,0	./.	0/1:21,6:30:75.89:183,0,76	1/1:10,0:10:3:25,3,0	1/1:14,0:14:3.35:16,3,0	1/1:17,0:16:11.95:93,12,0	1/1:8,0:7:3.45:22,3,0
chr10	96951916	.	AC	A	485.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.529;DP=466;FS=1.993;HRun=6;HaplotypeScore=45.4542;InbreedingCoeff=0.9847;MQ=80.01;MQ0=0;MQRankSum=-3.258;QD=22.07;ReadPosRankSum=1.250;VQSLOD=2.7022;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39.13:0,39,509	0/0:7,0:7:21.07:0,21,276	0/0:13,0:13:33.11:0,33,433	0/0:14,0:14:32.09:0,32,367	0/0:15,0:15:45.13:0,45,577	0/0:25,0:25:69.21:0,69,889	0/0:16,0:16:39.13:0,39,513	0/0:25,0:25:60.19:0,60,775	0/0:19,0:19:57.14:0,57,729	0/0:13,0:13:36.11:0,36,460	0/0:16,0:16:45.15:0,45,589	0/0:12,0:12:36.12:0,36,474	0/0:7,0:7:18.06:0,18,237	0/0:19,0:19:54.15:0,54,670	0/0:14,0:14:42.13:0,42,536	0/0:17,0:17:48.11:0,48,610	0/0:14,0:14:42.14:0,42,551	1/1:2,20:22:54.14:580,54,0	0/0:19,0:19:39.08:0,39,494	0/0:29,0:29:81.24:0,81,1047	0/0:25,0:25:72.23:0,72,946	0/0:9,0:9:24.08:0,24,316	0/0:12,0:12:36.10:0,36,458	0/0:17,0:17:36.02:0,36,421	0/0:16,0:16:45.15:0,45,592	0/0:14,0:14:36.12:0,36,474	0/0:27,0:27:75.24:0,75,978	0/0:16,0:16:48.16:0,48,631
chr10	96952742	.	GTTT	G	905.08	PASS	AB=0.552;AC=6;AF=0.107;AN=56;BaseQRankSum=4.391;DP=503;FS=5.810;HRun=12;HaplotypeScore=85.8386;InbreedingCoeff=0.5822;MQ=67.32;MQ0=12;MQRankSum=-0.923;QD=11.31;ReadPosRankSum=1.493;VQSLOD=1.0491;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:42:510,42,0	0/0:6,0:7:18.04:0,18,318	0/0:31,0:14:22.92:0,23,210	0/0:30,0:11:2.86:0,3,160	0/0:18,0:18:45.12:0,45,772	0/0:13,0:14:39.10:0,39,701	0/0:10,0:11:21.05:0,21,361	0/1:5,0:21:16.88:17,0,18	0/0:15,0:15:36.11:0,36,673	0/0:27,0:25:63.19:0,63,1106	0/0:17,0:19:48.09:0,48,819	0/0:5,0:6:18.04:0,18,304	0/0:13,0:13:36.09:0,36,574	0/0:11,0:11:30.09:0,30,502	0/0:18,0:18:42.13:0,42,717	1/1:2,14:15:39.12:493,39,0	0/0:37,0:37:77.55:0,78,1381	0/1:2,2:15:12.63:22,0,13	0/0:15,0:15:42.12:0,42,758	0/0:23,0:23:63.17:0,63,1176	0/0:12,0:10:27.06:0,27,438	0/0:12,0:11:20.92:0,21,334	0/0:21,0:21:54.66:0,55,1028	0/0:8,0:9:24.04:0,24,365	0/0:17,0:17:42.14:0,42,786	0/0:23,0:23:50.89:0,51,891	0/0:23,0:22:60.19:0,60,1098	0/0:2,0:8:9.15:0,9,30
chr10	96953022	.	TTGTG	T	705.42	PASS	AB=0.722;AC=9;AF=0.161;AN=56;BaseQRankSum=8.590;DP=688;FS=0.717;HRun=0;HaplotypeScore=139.7357;InbreedingCoeff=0.7605;MQ=68.07;MQ0=10;MQRankSum=-6.601;QD=6.41;ReadPosRankSum=-0.227;VQSLOD=2.8051;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,13:29:2.67:48,3,0	0/0:17,0:17:36.12:0,36,769	0/0:27,0:20:12.04:0,12,227	0/0:28,0:21:14.33:0,14,230	0/0:21,0:21:47.91:0,48,908	0/0:36,0:36:62.58:0,63,1325	0/0:21,0:23:44.89:0,45,953	1/1:11,0:26:36.04:352,36,0	0/0:17,0:18:44.10:0,44,880	0/0:27,0:28:59.81:0,60,1190	0/0:16,0:16:36.12:0,36,791	0/0:19,0:19:39.11:0,39,869	0/0:24,0:25:50.89:0,51,1012	0/0:28,0:28:51.05:0,51,1059	0/0:35,0:34:22.34:0,22,1392	1/1:12,19:34:14.44:323,14,0	0/0:34,0:36:51.15:0,51,1460	0/1:8,0:13:21.96:22,0,67	0/0:19,0:16:18.06:0,18,350	0/0:32,0:32:23.12:0,23,1255	0/0:32,1:35:5.20:0,5,968	0/0:22,0:23:56.91:0,57,1154	0/0:19,0:19:47.83:0,48,988	0/0:26,0:26:42.62:0,43,992	0/0:17,0:17:38.95:0,39,793	0/0:20,0:20:31.35:0,31,681	0/0:27,0:29:59.67:0,60,1292	1/1:2,0:8:12.01:112,12,0
chr10	96955854	.	ATGTGTG	A	1086.25	PASS	AB=1.000;AC=9;AF=0.180;AN=50;BaseQRankSum=5.664;DP=171;FS=17.991;HRun=0;HaplotypeScore=51.6254;InbreedingCoeff=0.4907;MQ=49.52;MQ0=4;MQRankSum=-5.781;QD=14.11;ReadPosRankSum=-2.592;VQSLOD=-0.3036;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:10.80:111,11,0	./.	0/0:7,0:3:1.81:0,2,91	./.	0/0:4,0:4:12.04:0,12,264	0/0:2,0:2:3.01:0,3,72	./.	1/1:28,5:32:44.74:741,45,0	0/0:2,0:2:6.02:0,6,144	0/0:5,0:5:9.02:0,9,189	0/0:10,0:10:27.08:0,27,558	0/0:4,0:4:12.04:0,12,285	0/0:4,0:4:9.03:0,9,216	0/0:1,0:1:3.01:0,3,72	0/0:1,0:1:3.01:0,3,72	1/1:9,0:9:12.04:143,12,0	0/0:13,0:13:24.07:0,24,527	0/1:17,0:17:54.90:55,0,153	0/0:7,0:5:8.99:0,9,125	0/0:3,0:3:3.01:0,3,72	0/0:2,0:2:3.01:0,3,49	0/0:1,0:1:3.01:0,3,72	0/0:4,0:4:12.04:0,12,288	0/0:1,0:1:3.01:0,3,72	0/0:3,0:3:9.03:0,9,222	0/0:6,0:6:18.06:0,18,449	0/0:7,0:6:18.06:0,18,425	1/1:8,0:7:15.05:182,15,0
chr10	96959344	.	AAC	A	211.68	PASS	AB=0.923;AC=20;AF=0.400;AN=50;BaseQRankSum=2.492;DP=320;FS=1.062;HRun=0;HaplotypeScore=42.7763;InbreedingCoeff=-0.0019;MQ=61.87;MQ0=19;MQRankSum=-1.488;QD=1.45;ReadPosRankSum=1.230;VQSLOD=1.1899;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:15:5.64:21,6,0	0/0:3,0:3:3:0,3,25	./.	0/0:35,0:16:0:0,0,0	0/0:4,0:7:5.37:0,5,32	0/1:10,5:15:22.97:23,0,59	0/1:14,0:14:17:17,0,177	./.	0/0:8,0:8:2.81:0,3,21	0/1:9,0:9:18.90:19,0,38	0/0:6,0:5:6.01:0,6,69	1/1:3,4:7:6.01:64,6,0	0/0:2,0:2:3.01:0,3,44	1/1:7,0:7:0.47:1,0,0	0/0:8,0:8:6.02:0,6,85	1/1:5,0:6:2.84:14,3,0	0/0:15,0:15:3.01:0,3,43	1/1:7,0:10:8.52:42,9,0	0/1:13,0:13:13.76:14,0,69	0/1:12,0:12:10.84:11,0,60	0/0:23,0:22:8.89:0,9,62	1/1:6,0:6:3:26,3,0	0/0:8,0:8:9:0,9,92	0/1:11,2:13:24.81:52,0,25	0/1:7,3:10:22.95:23,0,79	0/1:8,0:8:27.03:27,0,35	0/0:4,0:4:3.01:0,3,44	./.
chr10	96959407	.	CAAAAAACT	C	1953.46	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.843;DP=462;FS=15.572;HRun=0;HaplotypeScore=122.0986;InbreedingCoeff=0.9435;MQ=62.67;MQ0=5;MQRankSum=-8.213;QD=29.16;ReadPosRankSum=-2.689;VQSLOD=1.9498;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,18:26:39.01:824,39,0	0/0:9,0:9:21.07:0,21,817	0/0:29,0:19:33.73:0,34,724	0/0:34,0:26:31.77:0,32,771	0/0:19,0:19:48.16:0,48,1933	0/0:14,0:14:36.12:0,36,1399	0/0:8,0:8:21.07:0,21,876	1/1:5,8:13:24.08:468,24,0	0/0:11,0:11:27.09:0,27,1037	0/0:20,0:20:42.14:0,42,1652	0/0:21,0:21:60.11:0,60,2080	0/0:19,0:19:51.16:0,51,1792	0/0:14,0:14:33.11:0,33,1276	0/0:8,0:8:24.07:0,24,874	0/0:11,0:11:21.07:0,21,877	1/1:4,8:12:17.73:440,18,0	0/0:21,0:21:54.18:0,54,2067	1/1:5,9:14:12.04:309,12,0	0/0:15,0:15:27.08:0,27,889	0/0:15,0:15:36.11:0,36,1344	0/0:10,0:10:24.08:0,24,826	0/0:16,0:16:42.14:0,42,1614	0/0:17,0:17:48.16:0,48,1823	0/0:20,0:20:42.14:0,42,1661	0/0:22,0:22:54.17:0,54,2027	0/0:23,0:23:66.23:0,66,2560	0/0:19,0:19:54.19:0,54,2081	1/1:1,1:2:3.01:77,3,0
chr10	96959422	.	CTAA	C	643.60	PASS	AB=0.956;AC=6;AF=0.107;AN=56;BaseQRankSum=8.966;DP=466;FS=8.038;HRun=0;HaplotypeScore=82.6305;InbreedingCoeff=0.1469;MQ=67.00;MQ0=2;MQRankSum=-7.340;QD=9.75;ReadPosRankSum=-1.677;VQSLOD=1.5407;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,3:26:99:244,0,211	0/0:9,0:9:27.09:0,27,644	0/0:34,0:28:40.34:0,40,1150	0/0:27,0:21:32.71:0,33,920	0/0:19,0:19:57.15:0,57,1338	0/0:15,0:15:42.13:0,42,951	0/0:15,0:15:45.14:0,45,1034	0/1:14,0:14:99:312,0,314	0/0:11,0:11:33.11:0,33,799	0/0:16,0:16:48.16:0,48,1172	0/0:23,0:23:69.14:0,69,1505	0/0:17,0:17:51.16:0,51,1152	0/0:15,0:15:45.15:0,45,1063	0/0:8,0:8:24.07:0,24,540	0/0:9,0:9:27.09:0,27,653	0/1:12,1:13:99:126,0,239	0/0:21,0:21:63.16:0,63,1456	0/1:12,0:12:60.89:61,0,174	0/0:12,0:11:30.09:0,30,654	0/0:17,0:17:48.11:0,48,1058	0/0:12,0:12:36.11:0,36,772	0/0:17,0:17:51.18:0,51,1183	0/0:18,0:18:54.19:0,54,1295	0/0:18,0:18:54.19:0,54,1282	0/0:21,0:21:60.19:0,60,1410	0/0:25,0:25:75.26:0,75,1811	0/0:19,0:19:57.20:0,57,1371	1/1:1,0:1:2.97:20,3,0
chr10	96959830	.	AGT	A	174.88	PASS	AB=0.919;AC=15;AF=0.268;AN=56;BaseQRankSum=3.466;DP=524;FS=9.641;HRun=0;HaplotypeScore=65.1447;InbreedingCoeff=-0.0195;MQ=66.05;MQ0=3;MQRankSum=0.494;QD=0.81;ReadPosRankSum=1.299;VQSLOD=0.3153;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:30:26.86:0,27,261	0/1:5,1:6:26.50:26,0,35	0/0:29,0:21:0.47:0,0,1	0/1:25,0:19:0:0,0,0	0/1:21,2:23:8.99:9,0,229	0/0:19,0:19:20.98:0,21,274	0/0:16,0:16:12.04:0,12,171	0/0:27,0:27:8.98:0,9,90	0/1:13,0:13:33.68:34,0,119	0/0:16,0:16:7.31:0,7,90	0/1:9,1:10:23.49:23,0,77	0/0:16,0:16:18.06:0,18,268	0/1:12,0:13:2.13:2,0,76	0/1:15,0:15:16.58:17,0,202	0/1:19,0:19:8.20:8,0,285	0/0:24,0:24:23.26:0,23,495	0/1:19,4:24:81.65:82,0,205	1/1:22,0:22:11.58:62,12,0	0/0:20,0:20:11.99:0,12,129	0/0:15,0:15:21.03:0,21,285	0/0:22,0:22:0.11:0,0,140	0/0:14,0:13:1.11:0,1,157	0/1:17,2:20:29.43:29,0,97	0/0:18,0:18:21.07:0,21,309	0/1:12,4:16:11.47:11,0,224	0/0:16,0:16:17.76:0,18,184	0/0:27,0:27:35.67:0,36,412	1/1:9,0:9:2.90:16,3,0
chr10	96959872	.	TGTGA	T	820.27	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=1.207;DP=507;FS=4.547;HRun=0;HaplotypeScore=81.0451;InbreedingCoeff=0.4014;MQ=70.68;MQ0=11;MQRankSum=0.063;QD=8.37;ReadPosRankSum=-0.144;VQSLOD=1.9196;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:99:155,0,322	0/0:4,0:4:12.01:0,12,149	0/0:38,0:25:54.47:0,54,667	0/0:36,0:21:38.82:0,39,446	0/0:18,0:18:45.07:0,45,831	0/0:16,0:16:38.96:0,39,642	0/0:14,0:14:38.84:0,39,540	0/1:21,0:21:77.92:284,0,78	0/0:15,0:15:12.15:0,12,442	0/0:17,0:17:44.99:0,45,535	0/0:10,0:10:26.99:0,27,306	0/0:14,0:14:30.53:0,31,618	0/0:12,0:12:11.18:0,11,248	0/0:13,0:13:27.11:0,27,504	0/0:18,0:18:46.31:0,46,815	0/1:24,0:24:99:111,0,556	0/0:20,0:20:28.65:0,29,648	1/1:0,16:16:14.98:256,15,0	0/0:16,0:16:43.58:0,44,518	0/0:15,0:15:39.07:0,39,672	0/0:22,0:21:48.93:0,49,650	0/0:17,0:16:38.62:0,39,575	0/0:17,0:17:20.26:0,20,434	0/0:22,0:22:63.07:0,63,1018	0/0:23,0:23:57.06:0,57,882	0/0:16,0:16:42.24:0,42,628	0/0:16,0:16:44.79:0,45,775	1/1:9,1:10:2.66:145,3,0
chr10	96964552	.	TTACATTTA	T	4809.22	PASS	AB=0.571;AC=9;AF=0.161;AN=56;BaseQRankSum=9.448;DP=532;FS=2.989;HRun=0;HaplotypeScore=149.8765;InbreedingCoeff=0.8561;MQ=62.44;MQ0=4;MQRankSum=-10.473;QD=55.28;ReadPosRankSum=-1.866;VQSLOD=4.6000;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:31:60.21:1269,60,0	0/0:10,0:10:30.10:0,30,1289	0/0:15,0:9:20.95:0,21,684	0/0:17,0:12:32.70:0,33,1173	0/0:26,0:26:75.24:0,75,2995	0/0:25,0:25:72.23:0,72,2823	0/0:14,0:14:39.13:0,39,1710	0/1:8,24:32:92.71:1866,0,93	0/0:17,0:17:48.16:0,48,1956	0/0:27,0:27:81.28:0,81,3332	0/0:23,0:23:66.23:0,66,2811	0/0:14,0:14:42.14:0,42,1685	0/0:18,0:18:54.19:0,54,2022	0/0:10,0:10:30.10:0,30,1337	0/0:17,0:17:45.15:0,45,1922	1/1:0,6:6:12.04:258,12,0	0/0:42,0:41:99:0,126,5125	1/1:0,7:7:21.07:577,21,0	0/0:23,0:23:60.12:0,60,2343	0/0:25,0:24:66.23:0,66,2464	0/0:20,0:20:60.21:0,60,2674	0/0:13,0:13:36.12:0,36,1517	0/0:12,0:12:27.09:0,27,1156	0/0:26,0:26:72.23:0,72,2745	0/0:10,0:10:30.03:0,30,978	0/0:24,0:24:72.25:0,72,3138	0/0:17,0:17:48.16:0,48,1863	1/1:3,8:11:30.10:839,30,0
chr10	96964566	.	TTG	T	452.22	PASS	AB=0.893;AC=18;AF=0.333;AN=54;BaseQRankSum=7.270;DP=573;FS=8.022;HRun=0;HaplotypeScore=112.4391;InbreedingCoeff=-0.0629;MQ=57.59;MQ0=12;MQRankSum=-1.169;QD=1.71;ReadPosRankSum=-0.033;VQSLOD=1.5808;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:33:15.57:69,16,0	0/1:11,0:10:23.97:24,0,81	0/0:17,0:7:3.48:0,3,44	0/0:17,0:11:2.60:0,3,10	0/0:28,0:28:23.25:0,23,469	0/0:22,3:25:45.11:0,45,610	0/1:15,3:18:15.21:15,0,209	./.	0/1:18,3:21:25.17:25,0,463	0/0:32,0:32:36.98:0,37,696	0/1:21,3:25:24.54:25,0,366	0/1:13,1:14:59.02:59,0,254	0/1:14,1:15:8.65:9,0,263	0/1:12,0:12:38.59:39,0,182	0/0:16,0:16:15.44:0,15,290	0/1:8,0:10:9.91:28,0,10	0/0:40,4:42:9.10:0,9,893	1/1:6,0:7:2.84:14,3,0	0/1:22,0:21:26.32:26,0,115	0/1:14,12:25:22.18:113,0,22	0/0:31,0:29:27.92:0,28,551	0/0:18,0:19:18.79:0,19,359	0/0:6,0:15:18.02:0,18,206	0/0:12,0:30:51:0,51,480	0/0:10,0:11:21.07:0,21,304	0/1:18,3:25:99:105,0,262	0/1:13,0:14:8.92:9,0,219	1/1:3,0:8:12.20:56,12,0
chr10	96964612	.	GCA	G	961.69	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=9.050;DP=527;FS=6.603;HRun=0;HaplotypeScore=96.0598;InbreedingCoeff=0.7853;MQ=58.63;MQ0=9;MQRankSum=-2.208;QD=12.82;ReadPosRankSum=0.537;VQSLOD=2.8352;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:23:10.90:81,11,0	0/0:10,0:10:26.32:0,26,287	1/1:9,0:1:1.25:3,1,0	0/0:10,0:6:2.31:0,2,19	0/0:16,0:16:44.87:0,45,717	0/0:26,0:26:66.18:0,66,1062	0/0:26,0:25:65.95:0,66,969	1/1:1,17:18:46.93:546,47,0	0/0:24,0:24:61.22:0,61,923	0/0:23,0:23:64.33:0,64,958	0/0:15,0:15:35.56:0,36,508	0/0:17,0:17:46.86:0,47,695	0/0:13,1:14:7.99:0,8,437	0/0:10,0:10:15.82:0,16,302	0/0:12,0:12:13.54:0,14,396	0/1:8,0:8:8.38:16,0,8	0/0:35,0:34:95.99:0,96,1563	1/1:0,9:9:15.05:191,15,0	0/0:19,0:18:51.06:0,51,688	0/0:29,1:28:42.81:0,43,553	0/0:34,0:33:81.94:0,82,1154	0/0:13,0:13:32.97:0,33,502	0/0:15,0:15:25.31:0,25,375	0/0:37,0:37:94.82:0,95,1514	0/0:17,0:17:39.09:0,39,601	0/0:31,0:31:89.06:0,89,1105	0/0:17,0:17:47.69:0,48,580	1/1:1,7:8:24.06:285,24,0
chr10	96964879	.	T	TGC	1476.03	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.805;DP=556;FS=4.535;HRun=0;HaplotypeScore=67.6817;InbreedingCoeff=0.9959;MQ=66.92;MQ0=0;MQRankSum=0.425;QD=39.89;ReadPosRankSum=-1.990;VQSLOD=4.7959;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:42.10:0,42,549	0/0:9,0:9:24.07:0,24,318	0/0:20,0:17:44.88:0,45,543	0/0:11,0:11:32.76:0,33,398	0/0:34,0:34:93.25:0,93,1226	0/0:27,0:27:66.22:0,66,922	0/0:13,0:13:39.12:0,39,528	1/1:5,24:29:55.93:1222,56,0	0/0:19,0:19:51.10:0,51,625	0/0:26,0:26:75.25:0,75,1049	0/0:24,0:24:66.20:0,66,901	0/0:17,0:17:51.12:0,51,657	0/0:16,0:16:48.13:0,48,636	0/0:17,0:17:51.17:0,51,712	0/0:21,0:21:63.21:0,63,879	0/0:15,0:15:42.13:0,42,570	0/0:20,0:20:54.13:0,54,714	0/0:26,0:26:75.14:0,75,966	0/0:11,0:11:27.07:0,27,347	0/0:24,0:24:69.20:0,69,928	0/0:16,0:16:48.12:0,48,648	0/0:14,0:14:36.10:0,36,469	0/0:24,0:24:63.17:0,63,828	0/0:11,0:11:33.11:0,33,458	0/0:23,0:24:66.15:0,66,850	0/0:32,0:32:81.26:0,81,1103	0/0:29,0:29:81.27:0,81,1131	1/1:0,8:8:21.07:375,21,0
chr10	96965961	.	GTTC	G	1570.12	PASS	AB=0.963;AC=11;AF=0.196;AN=56;BaseQRankSum=3.057;DP=291;FS=4.209;HRun=0;HaplotypeScore=55.6206;InbreedingCoeff=0.7480;MQ=80.62;MQ0=1;MQRankSum=-4.512;QD=21.51;ReadPosRankSum=0.391;VQSLOD=3.1743;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:18:39.13:634,39,0	0/0:7,0:7:21.07:0,21,468	0/0:15,0:11:2.76:0,3,213	0/1:25,0:20:29.43:29,0,332	0/0:15,0:15:45.14:0,45,961	0/0:7,0:7:18.06:0,18,401	0/0:7,0:7:18.06:0,18,402	1/1:4,8:12:24.08:389,24,0	0/0:6,0:6:18.06:0,18,400	0/0:12,0:12:33.11:0,33,712	0/0:17,0:17:48.16:0,48,1053	0/0:8,0:8:24.08:0,24,499	0/0:3,0:3:9.03:0,9,200	0/0:5,0:5:15.05:0,15,312	0/0:10,0:10:27.09:0,27,602	1/1:1,4:5:12.04:195,12,0	0/0:20,0:20:54.18:0,54,1177	1/1:0,11:11:27.09:440,27,0	0/0:18,0:19:57.20:0,57,1222	0/0:10,0:10:27.09:0,27,576	0/0:2,0:2:6.02:0,6,134	0/0:6,0:6:18.06:0,18,402	0/0:6,0:6:15.05:0,15,335	0/0:3,0:3:9.03:0,9,184	0/0:15,0:15:45.15:0,45,975	0/0:12,0:11:33.11:0,33,738	0/0:12,0:12:36.12:0,36,789	1/1:0,1:1:3.01:49,3,0
chr10	96967307	.	TATCTATCC	T	983.08	PASS	AB=0.949;AC=7;AF=0.125;AN=56;BaseQRankSum=8.622;DP=705;FS=4.521;HRun=0;HaplotypeScore=179.0300;InbreedingCoeff=-0.1233;MQ=54.06;MQ0=15;MQRankSum=-1.689;QD=5.15;ReadPosRankSum=-3.976;VQSLOD=1.7252;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:99:239,0,113	0/0:10,0:10:27.08:0,27,938	0/1:32,0:6:9.37:9,0,19	0/1:32,0:8:0.46:0,0,69	0/0:26,0:26:78.18:0,78,2625	0/0:31,0:31:81.11:0,81,2115	0/0:22,0:22:60.02:0,60,1226	0/1:17,21:31:98.59:558,0,99	0/0:31,0:31:84.17:0,84,2303	0/0:21,0:20:56.99:0,57,1483	0/0:21,0:21:57.18:0,57,1976	0/0:26,0:26:69.18:0,69,2082	0/0:24,0:24:57.16:0,57,1993	0/0:26,0:25:65.98:0,66,1983	0/0:27,0:25:72.10:0,72,1897	0/1:33,0:33:99:273,0,223	0/0:13,0:13:30.96:0,31,1141	0/0:18,0:18:4.45:0,4,32	0/0:15,0:15:39.06:0,39,1077	0/0:31,0:31:89.73:0,90,2764	0/0:38,0:38:84.69:0,85,2660	0/0:25,0:24:63.15:0,63,1988	0/1:19,0:19:2.83:3,0,1251	0/0:22,0:21:42.08:0,42,1275	0/0:30,0:30:81.23:0,81,2815	0/0:29,0:29:72.21:0,72,2119	0/0:28,0:28:84.26:0,84,3014	0/1:19,0:19:15.40:15,0,222
chr10	96967311	.	TATCC	T	2528.22	PASS	AB=0.881;AC=11;AF=0.196;AN=56;BaseQRankSum=11.648;DP=713;FS=6.429;HRun=0;HaplotypeScore=129.5729;InbreedingCoeff=0.7195;MQ=52.88;MQ0=15;MQRankSum=-5.629;QD=13.24;ReadPosRankSum=-2.571;VQSLOD=2.5988;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,2:18:29.41:283,29,0	0/0:9,0:9:24.06:0,24,490	0/1:38,0:7:5.97:6,0,27	0/1:30,0:8:0.71:1,0,46	0/0:28,0:28:78.14:0,78,1513	0/0:31,0:31:75.09:0,75,1286	0/0:25,0:25:62.33:0,62,759	1/1:33,0:28:24.97:552,25,0	0/0:31,0:31:48.32:0,48,1227	0/0:23,0:22:59.86:0,60,912	0/0:23,0:23:40.53:0,41,1218	0/0:27,0:26:60.11:0,60,1066	0/0:23,0:23:56.19:0,56,1169	0/0:28,0:27:65.89:0,66,1182	0/0:27,0:25:65.92:0,66,997	0/1:17,16:33:29.63:936,0,30	0/0:13,0:13:27.56:0,28,654	1/1:2,16:18:18.06:323,18,0	0/0:15,0:15:42.02:0,42,683	0/0:32,0:32:81.59:0,82,1590	0/0:35,0:35:78.02:0,78,1381	0/0:27,0:27:66.11:0,66,1182	0/0:19,0:19:36.09:0,36,711	0/0:21,0:20:36.06:0,36,696	0/0:29,0:29:78.19:0,78,1587	0/0:28,0:28:71.85:0,72,1166	0/0:28,0:28:81.19:0,81,1721	1/1:10,8:18:42.02:594,42,0
chr10	96967394	.	ATC	A	4955.84	PASS	AB=0.903;AC=42;AF=0.808;AN=52;BaseQRankSum=-2.249;DP=572;FS=0.000;HRun=0;HaplotypeScore=118.6784;InbreedingCoeff=0.1551;MQ=38.04;MQ0=34;MQRankSum=-0.943;QD=9.13;ReadPosRankSum=2.487;VQSLOD=4.0895;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,13:18:6.02:83,6,0	./.	./.	0/0:12,0:3:6.02:0,6,84	0/1:27,0:25:0:0,0,0	1/1:16,13:28:39.29:447,39,0	1/1:3,11:14:1.11:3,1,0	0/1:34,0:31:98.17:852,0,98	1/1:26,0:26:22.79:235,23,0	1/1:31,0:27:27.26:726,27,0	0/1:24,0:22:13.40:67,0,13	1/1:24,0:19:13.42:121,13,0	1/1:19,0:19:18.01:187,18,0	1/1:21,0:20:3.46:26,3,0	1/1:11,12:20:15.01:177,15,0	1/1:11,14:20:6.02:88,6,0	1/1:16,0:14:12.93:105,13,0	0/1:11,0:6:0.46:77,0,0	0/1:21,0:19:0.82:471,0,1	1/1:25,1:26:16.18:128,16,0	1/1:14,0:9:9.86:74,10,0	0/1:26,1:27:5:101,0,5	0/1:11,12:21:7.37:19,0,7	0/1:5,10:10:0:0,0,0	1/1:18,9:26:19.75:217,20,0	1/1:12,13:22:49.83:556,50,0	1/1:11,0:9:15:137,15,0	1/1:4,5:7:5.98:62,6,0
chr10	96967397	.	TCC	T	6389.69	PASS	AB=0.722;AC=42;AF=0.808;AN=52;BaseQRankSum=-3.317;DP=561;FS=11.411;HRun=2;HaplotypeScore=113.6519;InbreedingCoeff=0.2218;MQ=37.87;MQ0=33;MQRankSum=0.101;QD=12.41;ReadPosRankSum=5.132;VQSLOD=0.8999;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,6:19:39.93:64,0,40	./.	./.	0/0:12,0:3:6.02:0,6,91	0/1:0,26:24:0:0,0,0	1/1:13,14:26:32.76:361,33,0	0/1:12,0:12:0.07:0,0,1	0/1:12,23:32:99:845,0,127	1/1:0,25:25:20.82:327,21,0	1/1:6,26:28:51.44:1110,51,0	1/1:0,22:20:8.56:145,9,0	1/1:1,21:17:12.04:193,12,0	1/1:0,18:18:18.06:282,18,0	1/1:1,19:19:3:49,3,0	1/1:12,11:20:14.91:176,15,0	0/1:16,9:20:27.96:33,0,28	1/1:4,13:15:14.79:215,15,0	1/1:5,5:5:2.45:80,2,0	1/1:2,17:18:6.55:631,7,0	1/1:2,26:28:13.90:243,14,0	1/1:6,6:8:9.03:147,9,0	1/1:1,25:26:14.50:244,14,0	0/1:13,9:20:14.89:43,0,15	0/0:15,1:11:2.99:0,3,26	1/1:9,16:25:17.53:227,18,0	1/1:17,9:23:28.15:650,28,0	1/1:0,10:8:15.05:244,15,0	1/1:7,4:7:6.02:80,6,0
chr10	96968233	.	G	GT	829.82	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-3.193;DP=523;FS=9.136;HRun=9;HaplotypeScore=53.9898;InbreedingCoeff=0.7640;MQ=68.73;MQ0=8;MQRankSum=-1.703;QD=12.97;ReadPosRankSum=-2.536;VQSLOD=1.9518;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:95.93:0,96,828	0/0:6,0:6:18:0,18,156	0/0:23,0:9:11.44:0,11,91	0/1:28,0:17:7.60:8,0,101	0/0:33,0:33:87.16:0,87,772	0/0:18,1:19:23.79:0,24,432	0/0:14,0:14:41.99:0,42,364	1/1:6,21:26:63.13:683,63,0	0/0:13,0:13:26.96:0,27,234	0/0:17,0:17:44.97:0,45,388	0/0:21,0:21:59.98:0,60,520	0/0:6,0:6:11.99:0,12,104	0/0:22,0:22:24.58:0,25,367	0/0:10,0:10:26.99:0,27,234	0/0:15,0:15:29.98:0,30,260	0/0:9,0:9:26.99:0,27,234	0/0:29,0:29:83.98:0,84,729	0/0:24,0:24:59.97:0,60,521	0/0:23,0:23:40.41:0,40,407	0/0:18,1:18:14.74:0,15,343	0/0:13,0:13:38.99:0,39,338	0/0:8,0:8:17.99:0,18,156	0/0:23,0:23:56.99:0,57,494	0/0:18,0:17:15.17:0,15,357	0/0:19,0:19:50.98:0,51,443	0/0:14,0:14:35.99:0,36,312	0/0:21,0:21:56.98:0,57,495	1/1:1,8:9:24.06:265,24,0
chr10	96971840	.	C	CTGTT	1256.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.263;DP=695;FS=6.621;HRun=0;HaplotypeScore=114.3370;InbreedingCoeff=0.7142;MQ=88.48;MQ0=0;MQRankSum=-2.686;QD=52.34;ReadPosRankSum=0.756;VQSLOD=4.9186;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,135,2412	0/0:8,0:8:24.08:0,24,437	0/0:25,0:25:47.61:0,48,996	0/0:27,0:27:63.21:0,63,1111	0/0:19,0:19:54.17:0,54,968	0/0:21,0:21:57.20:0,57,1056	0/0:22,0:22:63.20:0,63,1123	0/0:23,0:23:66.23:0,66,1227	0/0:29,0:29:81.26:0,81,1478	0/0:26,0:26:69.24:0,69,1288	0/0:14,0:14:36.12:0,36,664	0/0:21,0:21:63.19:0,63,1135	0/0:22,0:22:57.18:0,57,1030	0/0:24,0:24:69.24:0,69,1270	0/0:29,0:29:84.29:0,84,1568	0/0:21,0:21:63.22:0,63,1175	0/0:32,0:32:81.25:0,81,1477	1/1:3,20:24:1.20:1332,1,0	0/0:24,0:24:59.38:0,59,1117	0/0:22,0:22:60.17:0,60,1057	0/0:38,0:38:99:0,108,1952	0/0:29,0:29:87.28:0,87,1564	0/0:13,0:12:33.11:0,33,607	0/0:42,0:42:99:0,114,1986	0/0:18,0:18:54.19:0,54,1008	0/0:29,0:29:78.25:0,78,1404	0/0:34,0:32:96.29:0,96,1744	0/0:11,0:11:30.04:0,30,461
chr10	96972468	.	TA	T	1126.76	PASS	AB=0.838;AC=24;AF=0.429;AN=56;BaseQRankSum=4.044;DP=524;FS=7.856;HRun=16;HaplotypeScore=68.5331;InbreedingCoeff=0.0196;MQ=68.06;MQ0=3;MQRankSum=1.967;QD=3.31;ReadPosRankSum=2.709;VQSLOD=-0.1905;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:31:64.54:432,65,0	0/1:6,2:8:17.59:18,0,80	0/0:28,0:11:11.79:0,12,89	0/1:14,0:10:1.62:2,0,19	0/1:21,1:22:6.03:6,0,157	0/0:12,2:14:8.93:0,9,178	0/1:13,4:19:27.77:28,0,191	0/0:17,0:17:31.02:0,31,121	0/1:13,2:15:3.22:3,0,180	1/1:9,12:22:36.79:211,37,0	1/1:9,10:19:1.18:117,1,0	0/0:15,0:15:20.81:0,21,163	1/1:2,1:10:17.36:60,17,0	0/1:12,2:15:3.43:3,0,162	0/1:20,1:22:4.07:4,0,236	1/1:7,13:21:30.97:184,31,0	0/0:14,2:17:5.75:0,6,251	0/0:21,0:22:40.79:0,41,177	0/1:20,7:28:45.98:46,0,276	0/1:17,7:24:57.19:57,0,212	0/1:9,5:14:30.85:31,0,85	0/1:7,4:11:33.06:33,0,80	0/1:12,4:16:26.19:26,0,123	0/1:10,3:14:6.21:6,0,161	0/1:11,3:15:31.25:31,0,100	0/0:25,0:28:38.43:0,38,286	0/0:27,2:32:47.32:0,47,462	0/0:10,1:11:13.10:0,13,119
chr10	96972480	.	A	AG	1109.24	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=3.161;DP=526;FS=1.508;HRun=0;HaplotypeScore=72.6482;InbreedingCoeff=0.8693;MQ=67.98;MQ0=6;MQRankSum=-1.765;QD=10.37;ReadPosRankSum=4.681;VQSLOD=3.7751;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:60.31:393,60,0	0/0:10,0:10:28.21:0,28,280	0/0:29,0:8:23.64:0,24,188	0/0:14,0:10:20.53:0,21,118	0/0:20,0:20:52.28:0,52,533	0/0:16,0:16:42.04:0,42,454	0/0:19,0:19:48.78:0,49,518	1/1:18,1:19:34.40:234,34,0	0/0:14,0:14:37.29:0,37,431	0/0:18,0:18:50.70:0,51,390	0/0:14,0:14:35.85:0,36,294	0/0:10,0:10:26.19:0,26,294	0/0:12,0:12:35.54:0,36,253	0/0:15,0:15:43.41:0,43,404	0/0:22,0:22:58.27:0,58,615	1/1:14,0:14:28.85:125,29,0	0/0:19,0:19:48.71:0,49,582	1/1:2,23:25:45.01:491,45,0	0/0:30,0:30:85.51:0,86,862	0/0:28,0:28:83.52:0,84,805	0/0:16,0:16:36:0,36,375	0/0:13,0:13:32.99:0,33,339	0/0:17,0:17:50.87:0,51,486	0/0:14,0:14:37.29:0,37,417	0/0:13,0:13:34.99:0,35,349	0/0:23,0:22:59:0,59,620	0/0:32,0:32:83.20:0,83,929	0/1:12,0:12:15.32:31,0,15
chr10	96972909	.	T	TCAAAAA	1606.58	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=-3.338;DP=567;FS=11.582;HRun=0;HaplotypeScore=114.2539;InbreedingCoeff=0.8570;MQ=63.34;MQ0=4;MQRankSum=-6.584;QD=37.36;ReadPosRankSum=0.512;VQSLOD=2.8373;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,10:25:33.11:1041,33,0	0/0:13,0:13:24.08:0,24,490	0/0:26,0:21:10.19:0,10,121	./.	0/0:22,0:22:42.14:0,42,834	0/0:24,0:24:54.19:0,54,1101	0/0:19,0:19:33.10:0,33,635	0/0:30,0:30:30.99:0,31,605	0/0:15,0:15:39.13:0,39,795	0/0:16,0:16:36.11:0,36,661	0/0:22,0:22:45.15:0,45,884	0/0:21,0:21:45.14:0,45,883	0/0:15,0:15:24.07:0,24,453	0/0:18,0:18:30.09:0,30,576	0/0:22,0:22:33.10:0,33,604	1/1:12,6:18:27.01:686,27,0	0/0:34,0:34:72.24:0,72,1396	0/0:25,0:25:29.90:0,30,612	0/0:19,0:19:32.94:0,33,585	0/0:26,0:26:51.18:0,51,1040	0/0:13,0:13:24.08:0,24,484	0/0:16,0:16:24.08:0,24,490	0/0:15,0:15:21.04:0,21,388	0/0:19,0:19:7.57:0,8,818	0/0:18,0:18:30.10:0,30,612	0/0:27,0:26:39.13:0,39,795	0/0:26,0:26:45.13:0,45,823	0/0:3,0:3:3.01:0,3,61
chr10	96972962	.	A	AAAAAC	2737.87	PASS	AB=0.622;AC=9;AF=0.161;AN=56;BaseQRankSum=5.116;DP=653;FS=0.000;HRun=0;HaplotypeScore=134.7172;InbreedingCoeff=0.8071;MQ=61.45;MQ0=4;MQRankSum=-7.153;QD=20.90;ReadPosRankSum=-4.984;VQSLOD=1.7855;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:29.82:455,30,0	0/0:16,0:16:27.08:0,27,459	0/0:30,0:17:14.86:0,15,156	0/0:27,0:13:2.88:0,3,15	0/0:27,0:27:66.20:0,66,1119	0/0:28,0:28:48.15:0,48,832	0/0:20,0:20:27.08:0,27,438	1/1:53,0:53:91.59:1078,92,0	0/0:21,0:21:45.14:0,45,762	0/0:26,0:26:48.15:0,48,819	0/0:26,0:26:48.13:0,48,790	0/0:21,0:21:45.13:0,45,752	0/0:13,0:13:21.03:0,21,314	0/0:13,0:13:21.05:0,21,353	0/0:23,0:23:54.18:0,54,959	1/1:9,1:19:21.07:444,21,0	0/0:37,0:37:66.21:0,66,1168	0/1:11,17:28:26.91:696,0,27	0/0:22,0:22:11.99:0,12,183	0/0:31,0:31:51.16:0,51,865	0/0:19,0:19:39.08:0,39,646	0/0:16,0:16:33.10:0,33,528	0/0:11,0:11:30.06:0,30,455	0/0:25,0:25:51.11:0,51,859	0/0:23,0:23:42.14:0,42,764	0/0:23,0:22:42.14:0,42,736	0/0:23,0:23:32.17:0,32,792	1/1:2,0:7:12.04:227,12,0
chr10	96972989	.	A	AAAC	1546.59	PASS	AB=0.886;AC=5;AF=0.089;AN=56;BaseQRankSum=3.250;DP=641;FS=1.986;HRun=0;HaplotypeScore=103.4419;InbreedingCoeff=-0.0985;MQ=62.65;MQ0=4;MQRankSum=-3.882;QD=12.08;ReadPosRankSum=-0.688;VQSLOD=3.0095;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:18,4:22:99:301,0,567	0/0:11,0:11:33.11:0,33,557	0/0:21,0:15:28.46:0,28,376	0/0:17,0:10:17.02:0,17,135	0/0:36,0:36:99:0,102,1651	0/0:27,0:27:75.24:0,75,1212	0/0:18,0:18:48.15:0,48,764	0/1:27,22:50:99:994,0,818	0/0:20,0:20:60.17:0,60,940	0/0:29,0:29:80.07:0,80,1265	0/0:26,0:26:66.22:0,66,1078	0/0:19,0:19:57.19:0,57,956	0/0:14,0:14:30.09:0,30,459	0/0:14,0:14:33.10:0,33,528	0/0:24,0:24:69.24:0,69,1160	0/1:20,0:19:40.96:41,0,388	0/0:34,0:34:89.93:0,90,1446	0/1:27,0:27:99:207,0,347	0/0:19,0:19:42.14:0,42,657	0/0:25,0:25:75.23:0,75,1200	0/0:27,0:27:72.24:0,72,1159	0/0:19,0:19:57.18:0,57,896	0/0:20,0:20:59.51:0,60,861	0/0:25,0:25:49.07:0,49,1084	0/0:21,0:21:63.22:0,63,1059	0/0:24,0:22:66.22:0,66,1078	0/0:23,0:23:69.22:0,69,1123	0/1:8,1:9:79.78:122,0,80
chr10	96973354	.	A	ATAGTAATAGTAG	3834.97	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-0.387;DP=681;FS=2.704;HRun=0;HaplotypeScore=211.4307;InbreedingCoeff=0.9624;MQ=64.30;MQ0=4;MQRankSum=-7.341;QD=27.39;ReadPosRankSum=-4.315;VQSLOD=2.1066;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:8,18:27:9.93:287,10,0	0/0:11,0:11:30.02:0,30,674	0/0:20,0:15:16.08:0,16,203	0/0:13,0:10:13.12:0,13,160	0/0:30,0:29:81.02:0,81,1439	0/0:22,0:22:39.02:0,39,977	0/0:27,0:27:74.97:0,75,1066	1/1:48,0:46:99:826,101,0	0/0:25,0:25:69.07:0,69,1550	0/0:25,0:26:74.10:0,74,1211	0/0:21,0:21:50.88:0,51,852	0/0:24,0:24:54.07:0,54,1282	0/0:16,0:16:48.04:0,48,1100	0/0:28,0:28:80.85:0,81,1639	0/0:32,0:32:86.99:0,87,1415	1/1:2,17:25:18.06:993,18,0	0/0:17,0:19:32.42:0,32,1232	1/1:23,2:25:63.01:1414,63,0	0/0:17,0:16:18.36:0,18,680	0/0:26,0:26:62.97:0,63,1240	0/0:32,0:32:78:0,78,1620	0/0:20,0:20:51.01:0,51,811	0/0:20,0:20:54.01:0,54,966	0/0:24,0:24:63.01:0,63,1467	0/0:23,0:23:66.04:0,66,1284	0/0:34,0:34:90.07:0,90,1732	0/0:30,0:30:75.07:0,75,1716	1/1:5,0:15:9.03:315,9,0
chr10	96973535	.	T	TTC	1253.96	PASS	AB=0.879;AC=14;AF=0.269;AN=52;BaseQRankSum=1.851;DP=666;FS=1.333;HRun=0;HaplotypeScore=97.1001;InbreedingCoeff=0.5695;MQ=68.60;MQ0=16;MQRankSum=-2.936;QD=5.70;ReadPosRankSum=-0.736;VQSLOD=3.1142;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,13:29:18.06:270,18,0	0/0:13,0:13:14.99:0,15,157	./.	./.	0/0:26,0:26:25.41:0,25,265	0/0:19,0:19:14.77:0,15,152	0/1:18,1:19:17.91:18,0,227	1/1:42,0:43:23.42:173,23,0	0/0:19,0:20:35.91:0,36,364	0/0:23,0:22:16.35:0,16,155	0/0:16,0:16:21.53:0,22,230	0/0:29,0:27:49.94:0,50,524	0/0:19,0:21:29.91:0,30,310	0/0:21,0:24:17.49:0,17,177	0/0:20,0:23:41.93:0,42,433	0/1:9,14:22:26.83:439,0,27	0/0:24,0:24:41.99:0,42,460	1/1:7,0:14:5.96:44,6,0	0/0:20,0:17:16.70:0,17,154	0/0:25,0:29:25.45:0,25,268	0/0:22,0:24:25.70:0,26,242	0/0:28,0:28:25.43:0,25,432	0/0:20,0:20:18.92:0,19,190	0/1:11,0:11:22.49:22,0,117	0/1:18,1:19:21.06:21,0,178	0/0:29,0:30:31.09:0,31,289	1/1:16,0:34:32.69:311,33,0	1/1:9,0:20:15:131,15,0
chr10	96974589	.	AG	A	1810.14	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.603;DP=680;FS=0.533;HRun=4;HaplotypeScore=65.2702;InbreedingCoeff=0.9989;MQ=71.92;MQ0=0;MQRankSum=-1.824;QD=33.52;ReadPosRankSum=-3.382;VQSLOD=2.7330;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1603	0/0:14,0:14:42.13:0,42,587	0/0:19,0:18:26.54:0,27,522	0/0:15,0:15:30.07:0,30,395	0/0:27,0:27:63.21:0,63,902	0/0:14,0:14:42.14:0,42,597	0/0:21,0:21:60.20:0,60,861	1/1:1,38:39:99:1374,111,0	0/0:24,0:24:66.04:0,66,902	0/0:22,0:22:63.19:0,63,858	0/0:13,0:13:33.11:0,33,475	0/0:21,0:21:60.20:0,60,863	0/0:28,0:28:78.26:0,78,1121	0/0:33,0:33:96.32:0,96,1380	0/0:17,0:17:51.17:0,51,733	0/0:33,0:33:99:0,99,1408	0/0:35,0:35:99:0,102,1468	0/0:24,0:24:72.24:0,72,1033	0/0:21,0:21:63.21:0,63,907	0/0:26,0:26:75.24:0,75,1059	0/0:49,0:49:99:0,144,1995	0/0:15,0:15:45.15:0,45,648	0/0:19,0:19:54.17:0,54,756	0/0:38,0:38:99:0,111,1580	0/0:16,0:16:48.15:0,48,672	0/0:14,0:14:42.12:0,42,585	0/0:30,0:30:87.29:0,87,1251	1/1:0,15:15:45.14:558,45,0
chr10	96976311	.	T	TTA	693.52	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=5.109;DP=295;FS=5.190;HRun=0;HaplotypeScore=40.5885;InbreedingCoeff=0.4257;MQ=58.04;MQ0=24;MQRankSum=-1.855;QD=11.96;ReadPosRankSum=0.538;VQSLOD=2.6852;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,11:11:27.09:457,27,0	0/0:3,0:3:8.89:0,9,75	0/0:4,0:4:3.26:0,3,23	0/0:7,0:5:9.79:0,10,80	0/0:15,0:15:41.84:0,42,449	0/0:23,0:22:37.98:0,38,656	0/0:3,0:3:6.91:0,7,81	0/1:19,0:16:2.59:3,0,157	0/0:5,0:4:9.03:0,9,119	0/0:17,0:17:46.51:0,47,528	0/0:11,0:11:6.40:0,6,292	0/0:1,0:1:3.01:0,3,40	0/0:5,0:4:12.04:0,12,159	0/0:9,0:8:24.08:0,24,317	0/0:7,0:7:14.72:0,15,149	1/1:0,10:11:21.07:350,21,0	0/0:26,0:21:59.81:0,60,664	0/0:9,0:7:0.78:0,1,60	0/0:16,0:14:42.01:0,42,473	0/0:13,0:13:38.96:0,39,454	0/0:6,0:6:18.02:0,18,218	0/0:3,0:3:9:0,9,100	0/0:6,0:6:17.97:0,18,216	0/0:1,0:1:3.01:0,3,40	0/0:17,0:17:44.92:0,45,511	0/0:11,0:11:33.07:0,33,418	0/0:19,0:18:51.02:0,51,604	0/1:10,0:6:8.44:8,0,42
chr10	96979368	.	AT	A	1234.24	PASS	AB=0.952;AC=8;AF=0.143;AN=56;BaseQRankSum=9.934;DP=684;FS=13.369;HRun=11;HaplotypeScore=72.4315;InbreedingCoeff=0.7223;MQ=73.94;MQ0=0;MQRankSum=-1.182;QD=11.12;ReadPosRankSum=-1.824;VQSLOD=1.1158;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,1:37:68.41:0,68,908	0/0:14,1:15:14.45:0,14,359	0/0:23,0:21:8.91:0,9,203	0/1:11,0:12:11.93:12,0,13	0/0:32,0:32:75.13:0,75,775	0/0:25,1:26:50.54:0,51,743	0/0:22,1:23:32.50:0,32,551	1/1:14,26:40:77.08:623,77,0	0/0:26,0:26:63.16:0,63,671	0/0:31,0:31:84.20:0,84,885	0/0:16,0:16:39.10:0,39,415	0/0:27,0:30:77.85:0,78,783	0/0:13,1:14:8.44:0,8,295	0/0:18,0:18:42.09:0,42,440	0/0:35,0:35:90.18:0,90,936	0/0:20,0:20:54.10:0,54,554	0/0:35,1:36:65.44:0,65,874	1/1:3,25:28:68.84:566,69,0	0/0:18,1:19:26.46:0,26,478	0/0:16,1:17:26.48:0,26,486	0/1:17,2:19:4.18:4,0,371	0/0:18,1:19:29.49:0,29,519	0/0:25,0:26:66:0,66,685	0/0:24,0:24:63.16:0,63,670	0/0:21,1:22:29.44:0,29,506	0/0:37,1:38:61.91:0,62,833	0/0:25,0:25:62.90:0,63,624	1/1:4,7:12:23.01:178,23,0
chr10	96981738	.	C	CT	2778.42	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-12.229;DP=691;FS=4.242;HRun=10;HaplotypeScore=69.9898;InbreedingCoeff=0.9737;MQ=77.33;MQ0=0;MQRankSum=-2.201;QD=22.77;ReadPosRankSum=-1.571;VQSLOD=4.0652;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:7,33:41:72.25:912,72,0	0/0:10,0:10:23.97:0,24,197	0/0:33,0:28:56.77:0,57,453	0/0:21,0:22:35.36:0,35,248	0/0:30,0:32:75.96:0,76,600	0/0:24,0:24:65.87:0,66,531	0/0:21,0:22:55.94:0,56,446	1/1:6,19:25:54.01:537,54,0	0/0:21,0:21:59.91:0,60,489	0/0:29,0:29:65.89:0,66,542	0/0:26,0:27:70.94:0,71,572	0/0:18,0:18:47.92:0,48,394	0/0:26,0:26:74.88:0,75,613	0/0:18,0:18:50.91:0,51,415	0/0:32,0:32:86.85:0,87,708	1/1:3,18:22:29.32:501,29,0	0/0:38,0:38:98.83:0,99,808	1/1:2,29:32:90.04:933,90,0	0/0:26,0:26:59.88:0,60,485	0/0:33,1:35:44.93:0,45,564	0/0:9,0:9:26.95:0,27,219	0/0:22,1:23:27.94:0,28,436	0/0:25,0:26:67.95:0,68,547	0/0:22,0:22:56.93:0,57,467	0/0:23,0:23:53.91:0,54,443	0/0:19,0:20:25.10:0,25,349	0/0:32,0:33:58.72:0,59,621	1/1:0,2:2:6.02:64,6,0
chr10	96982174	.	GTTATT	G	1806.27	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.469;DP=383;FS=3.271;HRun=0;HaplotypeScore=67.7014;InbreedingCoeff=0.9006;MQ=73.45;MQ0=1;MQRankSum=-1.241;QD=22.30;ReadPosRankSum=-0.559;VQSLOD=3.0132;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:21.07:409,21,0	0/0:3,0:3:9.02:0,9,203	0/0:10,0:9:14.26:0,14,203	0/0:23,0:13:15.69:0,16,233	0/0:11,0:11:24.04:0,24,627	0/0:22,0:22:63.18:0,63,1730	0/0:8,0:8:18.06:0,18,531	1/1:6,16:22:48.14:821,48,0	0/0:13,0:13:27.09:0,27,711	0/0:16,0:16:39.13:0,39,1060	0/0:9,0:9:24.07:0,24,644	0/0:5,0:5:15.04:0,15,379	0/0:7,0:7:15.04:0,15,376	0/0:10,0:10:18.06:0,18,422	0/0:11,0:11:18.05:0,18,469	1/1:4,6:10:3.01:39,3,0	0/0:24,0:24:63.20:0,63,1753	1/1:4,11:15:18.06:351,18,0	0/0:27,0:27:57.16:0,57,1412	0/0:16,0:16:39.10:0,39,906	0/0:9,0:9:18.05:0,18,466	0/0:12,0:12:27.07:0,27,539	0/0:5,0:5:9.03:0,9,229	0/0:7,0:7:15.04:0,15,369	0/0:16,0:16:39.13:0,39,1045	0/0:21,0:21:45.15:0,45,1168	0/0:16,0:16:42.14:0,42,1056	1/1:3,12:15:18.06:351,18,0
chr10	96984058	.	G	GAA	1005.69	PASS	AB=0.571;AC=5;AF=0.089;AN=56;BaseQRankSum=2.353;DP=565;FS=0.544;HRun=12;HaplotypeScore=78.3137;InbreedingCoeff=0.6995;MQ=56.81;MQ0=7;MQRankSum=-0.552;QD=11.97;ReadPosRankSum=-2.115;VQSLOD=1.9256;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,31:40:53.40:689,53,0	0/0:15,0:15:35.98:0,36,325	0/0:10,0:4:5.46:0,5,38	0/0:12,0:7:13.87:0,14,103	0/0:19,0:23:21.36:0,21,273	0/0:9,0:9:17.74:0,18,166	0/0:15,0:15:29.74:0,30,277	0/0:30,0:32:46.13:0,46,489	0/0:21,0:22:26.62:0,27,344	0/0:22,0:21:54.03:0,54,496	0/0:18,0:19:27.49:0,27,248	0/0:8,0:9:8.82:0,9,125	0/0:18,0:18:38.65:0,39,331	0/0:14,0:14:20.83:0,21,186	0/0:25,0:27:59.23:0,59,523	1/1:2,16:19:27.09:365,27,0	0/0:34,0:34:74.89:0,75,691	0/1:6,0:24:42.55:80,0,43	0/0:21,0:20:35.58:0,36,316	0/0:20,0:25:19.95:0,20,252	0/0:12,0:15:12.41:0,12,196	0/0:13,0:13:30.02:0,30,278	0/0:21,0:21:34.19:0,34,314	0/0:19,0:21:44.63:0,45,447	0/0:18,0:18:51.01:0,51,464	0/0:26,0:27:44.08:0,44,457	0/0:21,0:21:38.83:0,39,360	0/0:12,0:12:23.92:0,24,210
chr10	96984291	.	T	TTG	865	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=8.258;DP=712;FS=0.000;HRun=0;HaplotypeScore=99.2197;InbreedingCoeff=0.5456;MQ=62.63;MQ0=15;MQRankSum=-2.668;QD=5.58;ReadPosRankSum=-3.285;VQSLOD=2.0783;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,13:29:30.03:382,30,0	0/0:10,0:10:6.07:0,6,272	0/1:50,0:25:20.12:20,0,247	0/1:52,0:28:30.24:30,0,279	0/0:22,0:22:48.07:0,48,552	0/0:17,0:16:38.67:0,39,427	0/0:29,0:29:63.15:0,63,730	0/0:26,0:25:2.91:0,3,270	0/0:10,0:10:26.10:0,26,286	0/0:31,0:32:69.02:0,69,791	0/0:15,0:15:33.10:0,33,400	0/0:33,0:33:90.27:0,90,1085	0/0:26,0:26:54.17:0,54,656	0/0:20,0:20:57.15:0,57,670	0/0:35,0:34:78.24:0,78,948	1/1:3,16:24:41.85:568,42,0	0/0:22,0:22:54.16:0,54,647	0/0:19,0:19:10.75:0,11,159	0/0:17,0:18:29.92:0,30,342	0/0:21,0:21:55.04:0,55,645	0/0:36,0:36:90.24:0,90,1077	0/0:16,0:16:14.32:0,14,414	0/0:24,0:24:54.15:0,54,646	0/0:33,0:33:81.19:0,81,957	0/0:18,0:18:45.13:0,45,538	0/0:27,0:27:66.20:0,66,796	0/0:24,0:24:57.18:0,57,693	0/0:24,0:24:16.14:0,16,247
chr10	96984308	.	C	CGT	1646.39	PASS	AB=0.835;AC=11;AF=0.196;AN=56;BaseQRankSum=1.855;DP=778;FS=1.094;HRun=0;HaplotypeScore=111.9753;InbreedingCoeff=0.4818;MQ=53.38;MQ0=21;MQRankSum=-3.085;QD=5.64;ReadPosRankSum=-3.306;VQSLOD=2.5038;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:30:21.04:153,21,0	0/0:9,0:10:26.91:0,27,307	0/1:72,0:31:19.31:19,0,101	0/1:77,1:38:46.11:46,0,137	0/0:18,0:18:39.12:0,39,470	0/0:14,0:15:32.93:0,33,375	0/0:28,0:29:25.75:0,26,733	1/1:10,20:29:11.59:578,12,0	0/1:11,0:12:8.35:8,0,322	0/0:24,0:24:61.43:0,61,728	0/0:19,0:19:44.57:0,45,507	0/0:34,0:35:96.13:0,96,1146	0/0:24,0:24:54.17:0,54,653	0/0:22,0:22:54.17:0,54,658	0/0:29,0:29:66.04:0,66,783	1/1:16,2:30:42.67:326,43,0	0/0:25,0:25:44.99:0,45,547	0/1:5,14:19:3.50:453,0,4	0/0:22,0:21:38.48:0,38,435	0/0:21,0:22:43.21:0,43,492	0/0:44,0:44:99:0,105,1240	0/0:16,0:16:36.09:0,36,417	0/0:24,0:23:59.77:0,60,705	0/0:35,0:35:93.27:0,93,1119	0/0:20,0:20:48.15:0,48,582	0/0:26,0:26:50.61:0,51,621	0/0:25,0:25:69.16:0,69,808	0/1:7,12:19:18.58:225,0,19
chr10	96984809	.	CT	C	1839.30	PASS	AB=0.830;AC=13;AF=0.232;AN=56;BaseQRankSum=9.240;DP=386;FS=11.043;HRun=11;HaplotypeScore=44.2906;InbreedingCoeff=0.6681;MQ=55.03;MQ0=0;MQRankSum=0.666;QD=13.93;ReadPosRankSum=-1.567;VQSLOD=2.0145;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:59.92:492,60,0	0/0:7,0:7:21.05:0,21,224	0/0:11,0:7:11.52:0,12,105	0/0:8,0:2:3:0,3,28	0/0:13,0:13:27.07:0,27,288	0/0:17,2:19:26.48:0,26,487	0/1:7,1:8:0.60:1,0,192	1/1:9,29:38:83.90:611,84,0	0/0:5,0:5:12.01:0,12,119	1/1:3,19:22:56.93:468,57,0	1/1:2,5:7:14.98:123,15,0	0/0:11,0:11:3.52:0,4,232	0/0:12,0:12:30.08:0,30,320	0/0:8,0:8:5.24:0,5,165	0/0:13,0:13:30.08:0,30,320	0/1:8,4:14:15.92:70,0,16	0/0:23,1:24:44.49:0,44,664	0/0:17,0:16:30.08:0,30,320	0/0:23,0:23:63.10:0,63,652	0/0:8,0:8:21.05:0,21,224	0/0:4,0:4:11.96:0,12,107	0/0:3,0:3:9.01:0,9,89	0/1:8,1:9:0.60:1,0,192	0/0:5,0:5:9.02:0,9,96	0/0:24,0:24:60.14:0,60,632	0/0:17,0:17:42.11:0,42,448	0/0:22,0:22:60.12:0,60,625	1/1:2,10:12:29.95:246,30,0
chr10	96985422	.	G	GT	364.13	PASS	AC=8;AF=0.211;AN=38;BaseQRankSum=0.059;DP=52;FS=0.000;HRun=0;HaplotypeScore=12.1907;InbreedingCoeff=0.5177;MQ=69.67;MQ0=0;MQRankSum=-2.438;QD=28.01;ReadPosRankSum=-0.820;VQSLOD=3.2718;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:9.01:85,9,0	./.	0/0:2,0:2:6.02:0,6,66	./.	0/0:2,0:2:6.02:0,6,84	0/0:1,0:1:3.01:0,3,42	0/0:1,0:1:3.01:0,3,42	1/1:0,7:7:21.05:277,21,0	0/0:5,0:5:12.51:0,13,168	0/0:3,0:3:9.02:0,9,99	0/0:4,0:4:12.02:0,12,137	0/0:1,0:1:3.01:0,3,42	./.	./.	./.	./.	0/0:3,0:3:9.03:0,9,124	1/1:0,2:2:6.02:86,6,0	0/0:2,0:2:6.02:0,6,83	0/0:1,0:1:3.01:0,3,41	0/0:5,0:5:12.04:0,12,168	./.	./.	./.	0/0:2,0:2:5.98:0,6,62	0/0:3,0:3:9.02:0,9,110	0/0:1,0:1:3.01:0,3,42	1/1:0,1:1:3.01:37,3,0
chr10	96985979	.	C	CAG	5836.19	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-14.057;DP=687;FS=3.001;HRun=0;HaplotypeScore=76.6139;InbreedingCoeff=0.9985;MQ=82.48;MQ0=3;MQRankSum=-2.276;QD=52.11;ReadPosRankSum=-0.322;VQSLOD=5.4474;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:39:99:2011,99,0	0/0:8,0:8:24.08:0,24,392	0/0:22,0:22:63.20:0,63,993	0/0:17,0:17:45.15:0,45,705	0/0:28,0:28:78.25:0,78,1234	0/0:24,0:24:72.25:0,72,1172	0/0:24,0:24:69.22:0,69,1096	1/1:1,30:32:96.32:1815,96,0	0/0:25,0:25:72.25:0,72,1164	0/0:23,0:23:66.21:0,66,1030	0/0:23,0:23:69.24:0,69,1126	0/0:29,0:29:81.28:0,81,1311	0/0:31,0:31:93.25:0,93,1434	0/0:24,0:24:66.21:0,66,1052	0/0:33,0:33:99:0,99,1587	1/1:0,15:15:42.14:853,42,0	0/0:32,0:32:96.26:0,96,1461	1/1:1,10:9:21.07:426,21,0	0/0:17,0:17:51.17:0,51,810	0/0:26,0:26:78.27:0,78,1265	0/0:42,0:42:99:0,120,1955	0/0:22,0:22:66.20:0,66,1029	0/0:30,0:30:90.31:0,90,1448	0/0:21,0:21:63.22:0,63,1024	0/0:23,0:23:66.23:0,66,1077	0/0:25,0:25:75.26:0,75,1223	0/0:26,0:26:75.26:0,75,1219	1/1:2,12:14:36.12:732,36,0
chr10	96987506	.	A	AT	315.96	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.346;DP=712;FS=4.785;HRun=4;HaplotypeScore=65.4953;InbreedingCoeff=0.9990;MQ=80.77;MQ0=0;MQRankSum=-2.605;QD=26.33;ReadPosRankSum=1.544;VQSLOD=2.6828;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1446	0/0:12,0:12:36.10:0,36,408	0/0:13,0:13:39.10:0,39,434	0/0:22,0:22:57.10:0,57,614	0/0:44,0:44:99:0,120,1360	0/0:16,0:16:45.13:0,45,511	0/0:16,0:16:45.13:0,45,511	0/0:38,0:38:99:0,99,1123	0/0:24,0:24:72.21:0,72,816	0/0:39,0:39:99:0,105,1182	0/0:31,0:31:93.25:0,93,1045	0/0:18,0:18:48.09:0,48,530	0/0:22,0:22:60.16:0,60,670	0/0:21,0:21:54.15:0,54,612	0/0:28,0:28:81.23:0,81,918	0/0:29,0:29:81.23:0,81,919	0/0:29,0:29:78.22:0,78,885	1/1:1,11:12:30.10:410,30,0	0/0:23,0:23:63.13:0,63,692	0/0:43,0:43:99:0,126,1428	0/0:21,0:21:60.17:0,60,681	0/0:21,0:21:60.17:0,60,681	0/0:32,0:32:84.17:0,84,919	0/0:23,0:23:66.19:0,66,749	0/0:20,0:20:54.14:0,54,604	0/0:29,0:29:87.24:0,87,978	0/0:30,0:30:84.24:0,84,953	0/0:11,0:11:33.09:0,33,373
chr10	96988197	.	GAGACAGACAGAC	G	82.04	PASS	AB=0.972;AC=3;AF=0.054;AN=56;BaseQRankSum=2.283;DP=587;FS=6.896;HRun=0;HaplotypeScore=191.4465;InbreedingCoeff=0.3435;MQ=55.70;MQ0=8;MQRankSum=-2.644;QD=1.75;ReadPosRankSum=-0.297;VQSLOD=2.0990;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:78.25:0,78,3917	0/0:5,0:5:12.04:0,12,481	0/0:22,0:11:3.01:0,3,53	0/0:36,0:18:23.31:0,23,670	0/0:17,0:17:45.14:0,45,2261	0/0:21,0:22:36.11:0,36,1799	0/0:36,0:36:78.21:0,78,3394	0/1:34,0:32:63.16:69,0,63	0/0:19,0:19:48.14:0,48,1997	0/0:18,0:19:45.15:0,45,2143	0/0:16,0:15:30.09:0,30,1299	0/0:25,0:24:60.21:0,60,3243	0/0:11,0:11:30.10:0,30,1668	0/0:16,0:17:33.11:0,33,1564	0/0:21,0:21:51.17:0,51,2492	0/0:17,0:16:39.13:0,39,2136	0/0:28,0:27:48.16:0,48,2689	1/1:0,12:12:3.01:105,3,0	0/0:22,0:21:25.86:0,26,840	0/0:9,0:9:15.93:0,16,528	0/0:38,0:38:75.23:0,75,3209	0/0:15,0:15:30.09:0,30,1482	0/0:14,0:15:24.08:0,24,1178	0/0:24,0:24:42.14:0,42,2056	0/0:14,0:14:33.10:0,33,1596	0/0:22,0:22:45.14:0,45,1926	0/0:21,0:21:45.14:0,45,2360	0/0:2,0:11:2.29:0,2,46
chr10	96990337	.	GT	G	1107.75	PASS	AB=0.917;AC=11;AF=0.196;AN=56;BaseQRankSum=11.043;DP=557;FS=10.919;HRun=10;HaplotypeScore=65.9324;InbreedingCoeff=0.8532;MQ=66.63;MQ0=2;MQRankSum=-1.312;QD=8.65;ReadPosRankSum=-1.335;VQSLOD=0.8455;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:71.96:624,72,0	0/0:13,0:13:39.09:0,39,417	1/1:6,0:5:4.04:14,4,0	0/0:12,0:8:9.97:0,10,117	0/0:19,0:20:22.21:0,22,453	0/0:21,0:21:45.11:0,45,489	0/0:12,0:13:12.89:0,13,327	1/1:6,0:35:39.72:133,40,0	0/0:15,0:15:39.02:0,39,415	0/0:31,0:31:78.17:0,78,837	0/0:24,0:24:69.17:0,69,750	0/0:18,1:19:28.05:0,28,511	0/0:20,0:20:57.13:0,57,619	0/0:17,0:17:48.13:0,48,531	0/0:19,0:19:41.93:0,42,493	1/1:0,21:21:47.67:416,48,0	0/0:23,1:26:39.94:0,40,639	0/0:16,1:17:8.59:0,9,338	0/0:21,0:22:50.32:0,50,512	0/0:19,0:19:42.59:0,43,466	0/0:10,0:10:24.06:0,24,260	0/0:19,0:19:48.13:0,48,531	0/1:20,2:22:4.03:4,0,386	0/0:18,0:18:54.06:0,54,571	0/0:22,0:23:62.95:0,63,656	0/0:28,1:29:55.16:0,55,836	0/0:21,0:19:50.16:0,50,591	1/1:0,0:15:28.52:84,29,0
chr10	96990970	.	TA	T	823.56	PASS	AB=0.955;AC=5;AF=0.089;AN=56;BaseQRankSum=8.068;DP=594;FS=5.038;HRun=11;HaplotypeScore=63.4100;InbreedingCoeff=0.7582;MQ=78.07;MQ0=4;MQRankSum=0.112;QD=12.11;ReadPosRankSum=0.390;VQSLOD=3.3349;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:28:65.92:542,66,0	0/0:5,0:5:15.04:0,15,160	0/0:20,0:16:14.91:0,15,193	0/1:20,1:18:16.56:17,0,147	0/0:32,1:34:74.43:0,74,973	0/0:25,0:25:75.16:0,75,784	0/0:23,0:23:60.15:0,60,640	0/0:32,1:35:71.26:0,71,931	0/0:15,0:15:38.05:0,38,433	0/0:22,1:24:46.78:0,47,548	0/0:20,1:21:26.59:0,27,486	0/0:16,0:16:42.09:0,42,440	0/0:8,0:8:21.05:0,21,224	0/0:16,0:16:45.11:0,45,473	0/0:24,1:26:38.34:0,38,590	1/1:1,17:18:47.95:394,48,0	0/0:26,1:27:53.52:0,54,761	0/0:19,0:19:56.98:0,57,589	0/0:13,1:14:10.94:0,11,305	0/0:27,1:28:38.38:0,38,598	0/0:19,0:19:42.11:0,42,448	0/0:21,0:21:30.47:0,30,477	0/0:16,0:16:48.11:0,48,505	0/0:20,0:20:54.10:0,54,564	0/0:19,0:19:55.30:0,55,563	0/0:24,1:25:44.27:0,44,640	0/0:28,0:27:69.52:0,70,738	0/0:21,0:21:60.14:0,60,633
chr10	96992667	.	A	AG	587.21	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=1.720;DP=430;FS=6.166;HRun=1;HaplotypeScore=71.0571;InbreedingCoeff=0.7509;MQ=71.17;MQ0=10;MQRankSum=-1.031;QD=6.18;ReadPosRankSum=-1.568;VQSLOD=-0.0336;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,20:29:8.64:69,9,0	0/0:4,0:4:12:0,12,107	0/0:26,0:11:15.27:0,15,155	0/1:18,0:11:0.35:0,0,52	0/0:18,0:17:34.46:0,34,247	0/0:20,0:18:43.83:0,44,362	0/0:19,0:19:35.47:0,35,301	1/1:11,8:19:41.85:354,42,0	0/0:10,0:10:20.94:0,21,171	0/0:17,0:17:45.50:0,46,433	0/0:23,0:22:46.37:0,46,417	0/0:10,0:10:23.67:0,24,180	0/0:12,0:11:23.03:0,23,156	0/0:11,0:11:26.56:0,27,200	0/0:7,0:7:11.96:0,12,110	0/1:5,0:5:20.69:84,0,21	0/0:14,0:13:32.81:0,33,269	1/1:9,0:9:20.70:145,21,0	0/0:20,0:18:44.02:0,44,339	0/0:9,0:9:26.62:0,27,211	0/0:9,0:8:13.65:0,14,113	0/0:19,0:18:47.85:0,48,442	0/0:10,0:10:28:0,28,214	0/0:13,0:13:17.80:0,18,139	0/0:23,0:23:52.26:0,52,423	0/0:28,0:28:74.23:0,74,669	0/0:12,0:11:27.92:0,28,201	1/1:6,9:12:9.64:90,10,0
chr10	96992839	.	T	TAGAC	1393.80	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.574;DP=556;FS=5.725;HRun=0;HaplotypeScore=92.2395;InbreedingCoeff=0.9656;MQ=83.85;MQ0=0;MQRankSum=-2.673;QD=60.60;ReadPosRankSum=-2.980;VQSLOD=4.2187;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1752	0/0:3,0:3:9.02:0,9,137	0/0:24,0:23:53.98:0,54,853	0/0:21,0:21:45.05:0,45,776	0/0:21,0:21:60.19:0,60,1070	0/0:17,0:17:48.14:0,48,824	0/0:24,0:24:66.18:0,66,1106	1/1:2,13:16:45.14:956,45,0	0/0:21,0:21:60.16:0,60,1066	0/0:19,0:19:57.18:0,57,997	0/0:8,0:8:20.94:0,21,351	0/0:16,0:16:45.15:0,45,824	0/0:20,0:20:54.17:0,54,951	0/0:20,0:20:60.21:0,60,1103	0/0:18,0:18:54.16:0,54,946	0/0:10,0:10:30.10:0,30,560	0/0:36,0:35:99:0,108,1978	0/0:28,0:28:84.29:0,84,1547	0/0:31,0:31:84.27:0,84,1494	0/0:9,0:9:27.09:0,27,504	0/0:42,0:42:99:0,123,2188	0/0:12,0:12:30.10:0,30,538	0/0:22,0:22:63.21:0,63,1145	0/0:20,0:20:60.10:0,60,1008	0/0:19,0:19:54.19:0,54,985	0/0:23,0:23:63.22:0,63,1156	0/0:15,0:15:45.15:0,45,820	1/1:0,7:7:21.07:558,21,0
chr10	96993376	.	CTTTCTTTTTTT	C	2298.37	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=9.010;DP=492;FS=6.680;HRun=0;HaplotypeScore=144.6508;InbreedingCoeff=0.8832;MQ=68.42;MQ0=5;MQRankSum=-4.748;QD=18.69;ReadPosRankSum=-1.463;VQSLOD=2.2413;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:21:14.51:220,15,0	0/0:9,0:9:24.08:0,24,1114	0/1:24,0:14:8.73:9,0,600	0/0:21,0:12:15.20:0,15,195	0/0:28,0:27:65.90:0,66,2378	0/0:10,0:10:30.10:0,30,1459	0/0:15,0:15:36.11:0,36,1361	1/1:12,20:29:61.44:968,61,0	0/0:8,0:8:21.06:0,21,750	0/0:18,0:18:51.12:0,51,1929	0/0:21,0:21:63.21:0,63,2743	0/0:11,0:10:27.08:0,27,981	0/0:15,0:14:39.09:0,39,1274	0/0:13,0:13:27.08:0,27,1070	0/0:12,0:12:30.08:0,30,1058	1/1:11,0:11:15.04:259,15,0	0/0:26,0:26:66.23:0,66,2729	1/1:12,0:12:23.99:478,24,0	0/0:23,0:23:60.19:0,60,2104	0/0:18,0:18:42.13:0,42,1599	0/0:16,0:17:35.80:0,36,1273	0/0:11,0:11:21.07:0,21,762	0/0:17,0:17:42.14:0,42,1732	0/0:16,0:16:34.36:0,34,1565	0/0:17,0:17:36.11:0,36,1063	0/0:21,0:21:60.17:0,60,2286	0/0:22,0:22:60.21:0,60,2548	1/1:6,15:21:18.06:539,18,0
chr10	96993380	.	CTTTTTTT	C	2124.56	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.465;DP=520;FS=16.163;HRun=10;HaplotypeScore=117.1013;InbreedingCoeff=0.9670;MQ=65.11;MQ0=5;MQRankSum=-4.567;QD=21.68;ReadPosRankSum=0.370;VQSLOD=0.0171;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:22:26.73:334,27,0	0/0:10,0:10:30.08:0,30,892	0/0:22,0:13:11.88:0,12,546	0/0:22,0:11:20.24:0,20,216	0/0:33,0:32:74.93:0,75,2048	0/0:12,0:12:36.12:0,36,1164	0/0:15,0:15:35.94:0,36,1069	1/1:26,4:27:61.53:787,62,0	0/0:9,0:9:21.06:0,21,605	0/0:23,0:23:66.14:0,66,1732	0/0:22,0:22:66.22:0,66,2163	0/0:12,0:11:33.10:0,33,859	0/0:15,0:14:42.10:0,42,1046	0/0:16,0:16:38.95:0,39,939	0/0:15,0:15:42.11:0,42,1014	1/1:2,9:11:7.11:326,7,0	0/0:30,0:30:52.58:0,53,2253	1/1:7,5:12:24.08:470,24,0	0/0:25,0:25:75.24:0,75,1894	0/0:16,0:17:45.14:0,45,1307	0/0:14,0:14:36.10:0,36,1030	0/0:12,0:12:24.08:0,24,737	0/0:20,0:20:54.18:0,54,1596	0/0:18,0:18:40.85:0,41,1311	0/0:14,0:14:36.11:0,36,894	0/0:22,0:22:66.19:0,66,1900	0/0:23,0:23:63.22:0,63,2024	1/1:17,4:21:18.06:378,18,0
chr10	96993396	.	TTTC	T	385.32	PASS	AB=0.992;AC=8;AF=0.143;AN=56;BaseQRankSum=9.064;DP=485;FS=3.677;HRun=0;HaplotypeScore=81.1134;InbreedingCoeff=0.1351;MQ=53.20;MQ0=11;MQRankSum=-7.819;QD=2.64;ReadPosRankSum=-1.608;VQSLOD=1.6029;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:31:40.86:41,0,71	0/0:11,0:11:11.29:0,11,288	0/0:15,0:8:11.21:0,11,65	0/1:14,0:3:9.65:10,0,13	0/0:28,0:27:36.03:0,36,400	0/0:12,0:12:24.10:0,24,318	0/0:14,0:14:22.74:0,23,334	0/1:36,2:35:30.25:144,0,30	0/0:8,0:8:14.98:0,15,167	0/0:17,0:17:34.39:0,34,439	0/0:22,0:21:58.21:0,58,701	0/1:10,0:9:7.39:7,0,215	0/0:11,0:9:24.05:0,24,339	0/0:13,0:13:26.57:0,27,303	0/0:11,0:11:18.95:0,19,268	0/1:16,0:15:21.87:59,0,22	0/0:33,0:33:60.82:0,61,776	0/1:16,0:14:37.09:74,0,37	0/0:19,0:19:50.06:0,50,540	0/0:14,0:14:34.01:0,34,353	0/0:10,0:10:21.01:0,21,259	0/0:10,0:10:20.81:0,21,251	0/0:17,0:17:44.18:0,44,419	0/0:22,0:22:39.26:0,39,386	0/0:11,0:11:14.94:0,15,169	0/0:22,0:22:56.71:0,57,653	0/0:19,0:19:50.46:0,50,602	1/1:16,3:18:20.10:188,20,0
chr10	96993397	.	TTC	T	529.81	PASS	AB=0.975;AC=7;AF=0.125;AN=56;BaseQRankSum=9.867;DP=481;FS=19.992;HRun=0;HaplotypeScore=72.3998;InbreedingCoeff=0.2089;MQ=50.60;MQ0=11;MQRankSum=-9.527;QD=3.87;ReadPosRankSum=-2.542;VQSLOD=0.0966;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,1:31:15.90:86,0,16	0/0:11,0:11:12.27:0,12,245	0/0:12,0:5:10.27:0,10,50	0/1:14,0:3:3.87:4,0,13	0/0:26,1:26:13.58:0,14,314	0/0:12,0:12:16.36:0,16,241	0/0:14,0:14:28.25:0,28,300	0/1:34,4:35:20.45:201,0,20	0/0:8,0:8:14.93:0,15,143	0/0:17,0:17:33.97:0,34,360	0/0:21,0:20:58.81:0,59,578	0/0:10,0:9:2.06:0,2,167	0/0:11,0:9:24.04:0,24,284	0/0:13,0:13:6.81:0,7,221	0/0:11,0:11:13.11:0,13,228	0/1:16,0:15:17.76:94,0,18	0/0:34,0:34:62.07:0,62,670	0/1:16,0:14:6.58:92,0,7	0/0:19,0:19:44.38:0,44,445	0/0:14,0:14:30.60:0,31,293	0/0:9,0:9:20.92:0,21,210	0/0:10,0:10:20.53:0,21,197	0/0:17,0:17:41.96:0,42,370	0/0:22,0:22:35.18:0,35,314	0/0:11,0:11:14.76:0,15,138	0/0:22,0:22:56.42:0,56,548	0/0:19,0:19:50.27:0,50,478	1/1:20,0:19:24.94:183,25,0
chr10	96995692	.	CT	C	1747.21	PASS	AB=0.929;AC=9;AF=0.161;AN=56;BaseQRankSum=10.640;DP=522;FS=6.214;HRun=11;HaplotypeScore=56.5642;InbreedingCoeff=0.8231;MQ=70.35;MQ0=0;MQRankSum=-1.264;QD=17.13;ReadPosRankSum=-0.952;VQSLOD=4.1329;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,39:41:99:942,116,0	0/0:4,0:4:9.02:0,9,96	0/1:11,1:12:0.22:0,0,142	0/0:9,0:8:5.38:0,5,38	0/0:26,0:26:75.16:0,75,788	0/0:17,0:17:45.09:0,45,471	0/0:21,0:21:48.12:0,48,511	1/1:4,16:21:46.95:371,47,0	0/0:11,0:11:30.07:0,30,319	0/0:16,0:16:39.10:0,39,416	0/0:12,1:13:11.44:0,11,321	0/0:22,0:22:57.14:0,57,601	0/0:20,0:20:48.09:0,48,497	0/0:20,1:21:23.27:0,23,410	0/0:21,0:21:51.12:0,51,537	1/1:2,15:17:44.95:369,45,0	0/0:27,0:27:72.05:0,72,750	0/0:17,0:17:48.12:0,48,512	0/0:11,1:14:1.42:0,1,240	0/0:15,0:17:44.78:0,45,444	0/0:16,0:16:45.09:0,45,471	0/0:13,0:13:33.08:0,33,352	0/0:14,1:15:14.45:0,14,359	0/0:28,2:30:29.35:0,29,704	0/0:12,0:12:33.08:0,33,352	0/0:26,2:28:28.45:0,28,681	0/0:27,1:30:34.53:0,35,591	1/1:1,9:10:26.97:222,27,0
chr10	96997159	.	TG	T	388.63	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.435;DP=720;FS=3.843;HRun=3;HaplotypeScore=69.4924;InbreedingCoeff=0.9987;MQ=83.20;MQ0=0;MQRankSum=-1.560;QD=25.91;ReadPosRankSum=1.368;VQSLOD=2.7680;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,1602	0/0:9,0:9:27.07:0,27,370	0/0:20,0:20:57.18:0,57,800	0/0:24,0:24:66.07:0,66,866	0/0:22,0:22:63.21:0,63,906	0/0:32,0:31:96.30:0,96,1348	0/0:24,0:24:69.23:0,69,993	0/0:29,0:29:84.28:0,84,1192	0/0:28,0:28:81.26:0,81,1148	0/0:32,0:32:96.32:0,96,1363	0/0:16,0:16:45.15:0,45,647	0/0:27,0:27:81.27:0,81,1165	0/0:30,0:30:87.29:0,87,1249	0/0:33,0:33:99:0,99,1394	0/0:22,0:22:63.19:0,63,888	0/0:23,0:23:69.21:0,69,974	0/0:36,0:36:99:0,108,1554	1/1:0,15:15:39.12:483,39,0	0/0:24,0:24:72.24:0,72,1037	0/0:16,0:16:48.15:0,48,674	0/0:49,0:49:99:0,144,2007	0/0:29,0:29:87.27:0,87,1217	0/0:18,0:18:54.16:0,54,758	0/0:37,0:37:99:0,108,1541	0/0:14,0:14:42.14:0,42,604	0/0:31,0:31:90.28:0,90,1260	0/0:27,0:27:81.22:0,81,1105	0/0:12,0:12:36.12:0,36,513
chr10	96999450	.	TTCC	T	727.86	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.557;DP=717;FS=0.000;HRun=0;HaplotypeScore=117.1087;InbreedingCoeff=0.9905;MQ=62.77;MQ0=3;MQRankSum=0.939;QD=20.80;ReadPosRankSum=0.062;VQSLOD=3.3018;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:27:36.79:0,37,498	0/0:11,0:11:24.08:0,24,466	0/0:35,0:28:39.08:0,39,720	0/0:29,0:19:22.13:0,22,611	0/0:26,0:26:66.19:0,66,1268	0/0:22,0:22:57.20:0,57,1144	0/0:21,0:21:42.14:0,42,848	0/0:23,0:34:53.10:0,53,655	0/0:28,0:28:75.26:0,75,1542	0/0:24,0:24:63.22:0,63,1285	0/0:16,0:16:36.12:0,36,714	0/0:29,0:29:81.28:0,81,1630	0/0:21,0:21:60.21:0,60,1217	0/0:22,0:22:45.15:0,45,881	0/0:34,0:34:78.27:0,78,1563	0/0:3,0:23:50.90:0,51,655	0/0:24,0:24:60.21:0,60,1194	1/1:9,26:34:57.19:823,57,0	0/0:23,0:22:48.04:0,48,837	0/0:25,0:25:66.23:0,66,1332	0/0:36,0:36:81.28:0,81,1652	0/0:19,0:19:54.18:0,54,1076	0/0:21,0:21:51.17:0,51,1026	0/0:36,0:36:90.27:0,90,1778	0/0:28,0:28:78.27:0,78,1591	0/0:30,0:30:87.30:0,87,1774	0/0:31,0:31:69.24:0,69,1417	0/0:1,0:7:21.07:0,21,278
chr10	96999978	.	A	ATT	1033.25	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.714;DP=401;FS=0.621;HRun=11;HaplotypeScore=49.4900;InbreedingCoeff=0.7398;MQ=70.43;MQ0=2;MQRankSum=-0.456;QD=18.79;ReadPosRankSum=-3.419;VQSLOD=1.3547;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:42.90:0,43,402	0/0:12,0:12:36.06:0,36,349	0/0:15,0:10:7.78:0,8,92	0/0:12,0:7:8.28:0,8,81	0/0:29,0:30:68.77:0,69,651	0/0:7,0:7:15.01:0,15,145	0/0:15,0:17:32.98:0,33,370	1/1:13,9:24:55.93:586,56,0	0/0:8,0:8:17.95:0,18,164	0/0:15,0:16:35.96:0,36,391	0/0:18,0:19:45.01:0,45,486	0/0:7,0:7:11.97:0,12,105	0/0:12,0:12:25.69:0,26,277	0/0:4,0:4:5.59:0,6,39	0/0:9,0:9:27.04:0,27,262	0/0:8,0:8:24.04:0,24,233	0/0:20,0:20:35.96:0,36,398	0/0:1,0:14:0.28:0,0,79	0/0:15,0:15:26.82:0,27,246	0/0:17,0:17:35.99:0,36,349	0/0:8,0:9:21.03:0,21,204	0/0:5,0:5:15.02:0,15,145	0/0:9,0:9:24.02:0,24,226	0/0:9,0:9:9.49:0,9,189	0/0:13,0:15:38.71:0,39,345	0/0:19,0:19:45.04:0,45,436	0/0:17,0:17:51:0,51,482	1/1:10,20:31:37.03:568,37,0
chr10	97002775	.	TG	T	709.52	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=9.276;DP=528;FS=1.247;HRun=1;HaplotypeScore=66.3289;InbreedingCoeff=0.8501;MQ=58.59;MQ0=8;MQRankSum=-5.872;QD=7.39;ReadPosRankSum=-3.768;VQSLOD=-0.6142;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:21:22.04:76,0,22	0/0:11,0:11:33.07:0,33,426	0/0:19,0:8:10.69:0,11,210	0/0:17,0:7:16.04:0,16,195	0/0:13,0:13:39.08:0,39,503	0/0:22,0:22:60.09:0,60,777	0/0:18,0:18:54.17:0,54,767	1/1:19,2:21:38.67:289,39,0	0/0:28,0:27:75.23:0,75,1050	0/0:20,0:20:57.14:0,57,763	0/0:12,0:12:32.99:0,33,381	0/0:18,0:18:54.04:0,54,705	0/0:20,0:20:47.61:0,48,630	0/0:17,0:17:50.18:0,50,678	0/0:21,0:21:51.15:0,51,726	1/1:16,0:16:15.52:103,16,0	0/0:28,0:28:80.95:0,81,1077	1/1:23,1:22:27.61:197,28,0	0/0:10,0:10:24.08:0,24,349	0/0:13,0:13:39.13:0,39,565	0/0:18,0:18:51.14:0,51,705	0/0:11,0:11:30.10:0,30,437	0/0:13,0:13:22.13:0,22,489	0/0:27,0:27:78.95:0,79,1077	0/0:29,0:29:81.17:0,81,1052	0/0:30,0:30:84.09:0,84,1104	0/0:17,0:16:40.47:0,40,493	1/1:11,1:12:25.17:207,25,0
chr10	97005815	.	C	CA	1314.42	PASS	AB=0.900;AC=9;AF=0.161;AN=56;BaseQRankSum=-8.550;DP=432;FS=5.685;HRun=10;HaplotypeScore=40.0632;InbreedingCoeff=0.7909;MQ=73.15;MQ0=0;MQRankSum=-0.024;QD=15.65;ReadPosRankSum=-0.511;VQSLOD=3.2278;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:36.09:384,36,0	0/0:12,0:12:35.96:0,36,295	0/0:9,0:7:11.71:0,12,94	0/0:15,0:10:8.90:0,9,65	0/0:31,0:32:77.59:0,78,624	0/0:12,0:12:32.34:0,32,255	0/0:7,0:7:20.98:0,21,172	1/1:8,16:24:48.11:505,48,0	0/0:8,0:8:20.97:0,21,172	0/0:24,0:24:62.91:0,63,514	0/1:16,2:18:16.03:16,0,297	0/0:7,0:7:20.98:0,21,172	0/0:15,0:15:41.95:0,42,344	0/0:7,0:8:20.02:0,20,154	0/0:12,0:12:29.94:0,30,243	1/1:0,7:7:9.02:96,9,0	0/0:22,0:22:62.92:0,63,517	0/0:12,0:12:29.96:0,30,246	0/0:13,0:13:29.94:0,30,244	0/0:23,0:23:62.91:0,63,517	0/0:15,0:15:41.93:0,42,345	0/0:10,0:10:26.97:0,27,222	0/0:16,0:17:46.98:0,47,375	0/0:3,0:3:2.98:0,3,25	0/0:16,0:18:40.99:0,41,326	0/0:24,0:25:58.94:0,59,471	0/0:28,0:29:70.89:0,71,566	1/1:2,18:21:41.27:474,41,0
chr10	97009077	.	T	TGTGTGTGTGTGC	975.78	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=2.727;DP=633;FS=0.797;HRun=0;HaplotypeScore=212.4647;InbreedingCoeff=0.5228;MQ=60.71;MQ0=7;MQRankSum=-6.185;QD=8.87;ReadPosRankSum=-2.185;VQSLOD=2.3882;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,15:43:8.84:270,9,0	0/0:11,0:12:33.03:0,33,703	0/0:9,0:5:5.05:0,5,43	0/0:17,0:7:0.66:0,1,72	0/0:17,0:17:48.11:0,48,1341	0/0:23,0:23:48.05:0,48,981	0/0:39,0:38:99:0,102,2079	0/1:20,0:19:79.41:79,0,238	0/0:15,0:15:45.11:0,45,1200	0/0:26,0:25:69.16:0,69,1681	0/0:11,0:11:30.06:0,30,718	0/0:21,0:21:56.97:0,57,1621	0/0:25,0:25:66.11:0,66,1513	0/0:23,0:23:63.11:0,63,1603	0/0:37,0:37:84.20:0,84,2607	1/1:11,11:24:7.84:262,8,0	0/0:42,0:42:77.80:0,78,2472	0/1:19,0:19:99:433,0,184	0/0:13,0:13:15.51:0,16,540	0/0:20,0:20:48.07:0,48,1325	0/0:34,0:32:78.05:0,78,1416	0/0:12,0:12:36.11:0,36,1199	0/0:19,0:19:45.10:0,45,1078	0/0:33,0:33:86.85:0,87,2198	0/0:24,0:24:41.40:0,41,1362	0/0:29,0:28:58.31:0,58,1543	0/0:22,0:21:63.11:0,63,1542	1/1:2,0:2:3.01:65,3,0
chr10	97009823	.	G	GTA	2303.46	PASS	AB=1.000;AC=12;AF=0.222;AN=54;BaseQRankSum=3.094;DP=196;FS=7.688;HRun=0;HaplotypeScore=36.3946;InbreedingCoeff=0.4837;MQ=82.71;MQ0=2;MQRankSum=-3.729;QD=22.81;ReadPosRankSum=-2.249;VQSLOD=2.2484;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:2.60:10,3,0	0/0:5,0:5:15.05:0,15,191	0/1:17,0:14:17.55:18,0,87	0/1:12,0:6:11.86:12,0,53	0/0:4,0:4:9.03:0,9,114	0/0:15,0:15:36.10:0,36,444	0/0:1,0:1:3.01:0,3,38	1/1:8,27:35:87.23:1398,87,0	0/0:3,0:3:6.02:0,6,76	0/0:6,0:6:12.04:0,12,153	0/0:2,0:2:6.01:0,6,63	0/0:2,0:2:3.01:0,3,38	0/0:3,0:3:6.02:0,6,76	0/0:1,0:1:3.01:0,3,38	0/0:7,0:7:21.07:0,21,267	1/1:3,0:3:3:27,3,0	0/0:9,0:9:24.08:0,24,305	1/1:7,1:12:26.95:247,27,0	0/0:13,0:13:27.09:0,27,343	0/0:2,0:2:6.02:0,6,76	0/0:6,0:6:9.03:0,9,114	./.	0/0:2,0:2:6.02:0,6,76	0/0:2,0:2:5.98:0,6,58	0/0:5,0:5:15.05:0,15,191	0/0:4,0:4:12.04:0,12,153	0/0:3,0:3:9.02:0,9,101	1/1:2,15:16:45.15:748,45,0
chr10	97009848	.	TTGTATA	T	1983.01	PASS	AB=1.000;AC=10;AF=0.192;AN=52;BaseQRankSum=8.142;DP=185;FS=15.008;HRun=0;HaplotypeScore=50.1424;InbreedingCoeff=0.6301;MQ=71.48;MQ0=0;MQRankSum=-3.491;QD=24.79;ReadPosRankSum=-2.913;VQSLOD=0.7251;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,4:5:9.03:180,9,0	0/0:4,0:4:12.04:0,12,374	0/1:11,0:9:16.51:17,0,41	0/1:8,0:4:0:0,0,0	0/0:7,0:7:21.07:0,21,654	0/0:17,0:17:51.12:0,51,1542	0/0:2,0:2:6.01:0,6,98	1/1:19,7:31:86.92:1258,87,0	0/0:5,0:5:15.03:0,15,363	0/0:10,0:10:27.08:0,27,754	0/0:3,0:3:9.03:0,9,293	0/0:1,0:1:3.01:0,3,110	0/0:2,0:2:6:0,6,134	0/0:2,0:2:6.02:0,6,107	0/0:8,0:8:24.08:0,24,761	./.	0/0:14,0:14:39.13:0,39,1254	1/1:6,7:13:21:351,21,0	0/0:8,0:8:24.06:0,24,675	0/0:2,0:2:6.02:0,6,220	0/0:3,0:3:9.03:0,9,313	./.	0/0:4,0:4:12.04:0,12,402	0/0:3,0:3:9.03:0,9,329	0/0:4,0:4:12.04:0,12,418	0/0:3,0:3:9.02:0,9,246	0/0:3,0:3:9.03:0,9,329	1/1:6,3:12:24:330,24,0
chr10	97009849	.	TG	T	392.02	PASS	AB=0.916;AC=5;AF=0.096;AN=52;BaseQRankSum=6.311;DP=181;FS=4.499;HRun=1;HaplotypeScore=35.3172;InbreedingCoeff=0.2067;MQ=69.65;MQ0=0;MQRankSum=-3.783;QD=7.13;ReadPosRankSum=-0.276;VQSLOD=0.6290;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,1:5:9.03:125,9,0	0/0:4,0:4:12.04:0,12,191	0/0:11,0:9:2.29:0,2,65	0/0:6,0:2:1.82:0,2,5	0/0:7,0:7:21.07:0,21,333	0/0:18,0:18:51.17:0,51,813	0/0:2,0:2:6.02:0,6,96	0/1:27,2:29:99:241,0,110	0/0:5,0:5:15.03:0,15,214	0/0:10,0:10:27.06:0,27,368	0/0:3,0:3:9.03:0,9,144	0/0:1,0:1:3.01:0,3,48	0/0:2,0:2:6:0,6,72	0/0:2,0:2:6.01:0,6,73	0/0:8,0:8:24.08:0,24,383	./.	0/0:15,0:15:42.09:0,42,620	0/1:10,2:13:4.59:89,0,5	0/0:8,0:8:24.08:0,24,381	0/0:2,0:2:6.02:0,6,96	0/0:4,0:4:12.02:0,12,167	./.	0/0:4,0:4:12.04:0,12,192	0/0:3,0:3:9.03:0,9,144	0/0:4,0:4:12.04:0,12,192	0/0:4,0:4:12.02:0,12,168	0/0:3,0:3:9.03:0,9,144	0/1:8,0:8:34.41:50,0,34
chr10	97010498	.	C	CGATGGTCTT	3526.56	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.661;DP=613;FS=2.387;HRun=0;HaplotypeScore=165.2876;InbreedingCoeff=0.9747;MQ=75.50;MQ0=0;MQRankSum=-7.378;QD=103.72;ReadPosRankSum=-3.761;VQSLOD=3.2231;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.29:0,87,2498	0/0:9,0:9:24.08:0,24,721	0/0:16,0:16:39.13:0,39,1009	0/0:7,0:8:15.05:0,15,435	0/0:17,0:17:45.15:0,45,1329	0/0:20,0:20:60.21:0,60,1701	0/0:23,0:23:60.19:0,60,1709	1/1:19,5:28:78.25:3018,78,0	0/0:28,0:28:81.28:0,81,2279	0/0:19,0:19:51.18:0,51,1484	0/0:17,0:17:42.14:0,42,1210	0/0:27,0:27:78.26:0,78,2196	0/0:15,0:15:45.12:0,45,1264	0/0:21,0:21:60.19:0,60,1684	0/0:22,0:22:54.19:0,54,1599	0/0:18,0:18:51.18:0,51,1533	0/0:41,0:41:99:0,117,3337	0/0:24,0:24:69.19:0,69,1955	0/0:24,0:24:63.22:0,63,1838	0/0:20,0:20:48.15:0,48,1324	0/0:37,0:37:96.28:0,96,2717	0/0:23,0:23:69.24:0,69,2036	0/0:20,0:20:48.12:0,48,1202	0/0:26,0:26:75.26:0,75,2214	0/0:27,0:27:72.25:0,72,2071	0/0:23,0:23:57.20:0,57,1621	0/0:24,0:24:69.24:0,69,2012	1/1:1,4:6:12.04:508,12,0
chr10	97011361	.	G	GT	1247.71	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.277;DP=647;FS=0.000;HRun=1;HaplotypeScore=71.2483;InbreedingCoeff=0.9692;MQ=86.28;MQ0=0;MQRankSum=-1.709;QD=37.81;ReadPosRankSum=-3.568;VQSLOD=2.6177;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.26:0,90,1138	0/0:13,0:13:39.13:0,39,506	0/0:26,0:27:79.15:0,79,920	0/0:19,0:19:38.22:0,38,463	0/0:22,0:22:60.19:0,60,779	0/0:26,0:26:78.25:0,78,1011	0/0:27,0:27:81.26:0,81,1049	1/1:2,27:29:84.27:1227,84,0	0/0:18,0:18:51.17:0,51,662	0/0:26,0:26:78.25:0,78,1010	0/0:16,0:16:48.16:0,48,623	0/0:25,0:25:72.23:0,72,929	0/0:26,0:26:78.25:0,78,1012	0/0:26,0:26:75.24:0,75,973	0/0:18,0:18:54.16:0,54,687	0/0:23,0:23:57.17:0,57,726	0/0:35,0:35:99:0,102,1322	0/0:23,0:23:69.19:0,69,875	0/0:23,0:23:60.19:0,60,777	0/0:27,0:27:81.25:0,81,1037	0/0:25,0:25:68.99:0,69,835	0/0:14,0:14:42.14:0,42,545	0/0:17,0:17:51.15:0,51,648	0/0:31,0:31:90.29:0,90,1168	0/0:19,0:19:54.18:0,54,700	0/0:24,0:24:72.23:0,72,934	0/0:34,0:34:99:0,99,1285	1/1:1,3:4:9.03:135,9,0
chr10	97011420	.	CGTT	C	1641.86	PASS	AB=0.523;AC=3;AF=0.054;AN=56;BaseQRankSum=8.091;DP=635;FS=5.144;HRun=0;HaplotypeScore=86.4241;InbreedingCoeff=0.6523;MQ=84.86;MQ0=0;MQRankSum=-1.109;QD=30.98;ReadPosRankSum=2.101;VQSLOD=3.9931;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:63.22:1047,63,0	0/0:18,0:18:51.17:0,51,1155	0/0:21,0:21:53.23:0,53,1166	0/0:18,0:19:52.42:0,52,1050	0/0:28,0:28:81.27:0,81,1745	0/0:36,0:36:99:0,105,2378	0/0:25,0:25:75.24:0,75,1636	0/0:21,0:21:60.20:0,60,1319	0/0:22,0:22:66.20:0,66,1389	0/0:19,0:19:57.18:0,57,1176	0/0:24,0:24:66.66:0,67,1371	0/0:19,0:19:57.18:0,57,1248	0/0:14,0:14:39.13:0,39,863	0/0:33,0:33:96.31:0,96,2130	0/0:20,0:20:60.21:0,60,1359	0/1:2,21:23:19.81:701,0,20	0/0:26,0:26:75.21:0,75,1608	0/0:26,0:26:72.16:0,72,1528	0/0:24,0:23:60.17:0,60,1270	0/0:35,0:35:99:0,102,2222	0/0:13,0:13:39.13:0,39,864	0/0:17,0:17:48.16:0,48,1087	0/0:11,0:11:33.11:0,33,747	0/0:19,0:19:57.18:0,57,1238	0/0:17,0:17:51.16:0,51,1096	0/0:34,0:34:99:0,102,2257	0/0:29,0:29:84.25:0,84,1795	0/0:12,0:12:36.12:0,36,815
chr10	97011610	.	T	TC	1950.69	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.280;DP=699;FS=8.648;HRun=1;HaplotypeScore=67.5683;InbreedingCoeff=0.9928;MQ=82.00;MQ0=0;MQRankSum=-5.034;QD=35.47;ReadPosRankSum=2.905;VQSLOD=3.5917;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:81.19:1177,81,0	0/0:7,0:7:18.06:0,18,252	0/0:19,0:19:57.19:0,57,794	0/0:19,0:19:56.86:0,57,757	0/0:27,0:27:81.27:0,81,1133	0/0:39,0:39:99:0,111,1550	0/0:20,0:20:60.20:0,60,838	0/0:40,0:40:99:0,117,1620	0/0:20,0:20:60.19:0,60,821	0/0:34,0:34:99:0,102,1412	0/0:16,0:16:48.16:0,48,671	0/0:25,0:25:72.24:0,72,1007	0/0:24,0:24:72.24:0,72,1005	0/0:31,0:31:90.28:0,90,1241	0/0:29,0:29:84.28:0,84,1175	1/1:1,24:25:24.26:895,24,0	0/0:20,0:20:57.16:0,57,777	0/0:19,0:19:54.14:0,54,718	0/0:31,0:31:87.29:0,87,1203	0/0:30,0:29:87.28:0,87,1195	0/0:19,0:19:48.16:0,48,670	0/0:27,0:27:81.26:0,81,1114	0/0:30,0:30:87.26:0,87,1179	0/0:20,0:20:60.20:0,60,838	0/0:16,0:16:48.14:0,48,638	0/0:33,0:33:96.32:0,96,1343	0/0:42,0:42:99:0,126,1726	0/0:7,0:7:21.07:0,21,294
chr10	97011820	.	CTT	C	785.48	PASS	AB=0.938;AC=8;AF=0.143;AN=56;BaseQRankSum=4.151;DP=692;FS=6.132;HRun=16;HaplotypeScore=94.2919;InbreedingCoeff=0.6509;MQ=70.84;MQ0=3;MQRankSum=0.611;QD=6.39;ReadPosRankSum=5.179;VQSLOD=0.2876;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:36:68.23:0,68,375	0/1:6,1:7:7.05:7,0,178	0/1:29,0:21:19.12:19,0,95	0/0:16,0:11:15.99:0,16,100	0/0:33,0:33:64.45:0,64,724	0/0:13,1:15:1.45:0,1,231	0/0:20,0:21:30.09:0,30,470	1/1:20,12:34:9.05:217,9,0	0/0:22,0:23:11.98:0,12,428	0/0:26,0:30:66.66:0,67,685	0/0:19,0:24:65.40:0,65,687	0/0:21,0:22:44.26:0,44,418	0/0:22,0:23:55.51:0,56,552	0/0:22,0:22:26.44:0,26,310	0/0:24,0:24:46.30:0,46,492	0/0:18,0:27:23.15:0,23,268	0/0:26,0:26:52.52:0,53,636	1/1:14,9:26:24.59:218,25,0	0/0:23,0:27:49.83:0,50,532	0/0:28,1:33:51.36:0,51,705	0/0:17,0:17:36.04:0,36,385	0/0:19,0:23:56.93:0,57,631	0/0:20,0:23:45.44:0,45,420	0/0:13,0:23:33.10:0,33,412	0/0:22,0:24:51.29:0,51,523	0/0:22,0:24:49.85:0,50,507	0/0:28,0:32:64.87:0,65,516	1/1:3,22:27:34.25:471,34,0
chr10	97012289	.	T	TA	4186.14	PASS	AB=0.938;AC=51;AF=0.944;AN=54;BaseQRankSum=-3.196;DP=209;FS=8.494;HRun=1;HaplotypeScore=58.9359;InbreedingCoeff=0.2884;MQ=76.68;MQ0=2;MQRankSum=-6.939;QD=21.80;ReadPosRankSum=0.421;VQSLOD=2.9252;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:11:27.04:266,27,0	1/1:1,1:2:6:55,6,0	0/1:12,1:15:47.79:48,0,210	0/0:12,0:12:29.95:0,30,272	./.	1/1:0,7:7:21.03:199,21,0	1/1:1,6:7:18.03:185,18,0	1/1:0,19:17:51.14:596,51,0	1/1:1,2:3:6.01:57,6,0	1/1:1,8:9:27.06:291,27,0	1/1:2,5:7:3.01:45,3,0	1/1:2,3:5:9.02:100,9,0	1/1:1,4:5:15.01:136,15,0	1/1:1,4:5:6.01:56,6,0	1/1:2,5:7:21.04:231,21,0	1/1:1,2:3:9.02:102,9,0	1/1:1,3:4:11.29:98,11,0	1/1:2,3:5:5.38:52,5,0	1/1:3,12:15:39.12:481,39,0	1/1:1,2:3:3:25,3,0	1/1:1,12:13:20.38:177,20,0	1/1:2,3:5:5.93:62,6,0	1/1:0,8:8:6.01:74,6,0	1/1:2,6:8:9.86:75,10,0	1/1:1,3:4:9.02:102,9,0	1/1:1,6:7:21.06:236,21,0	1/1:3,3:6:12.03:151,12,0	1/1:0,9:9:27.06:289,27,0
chr10	97012290	.	AT	A	4718.90	PASS	AB=0.967;AC=52;AF=0.963;AN=54;BaseQRankSum=2.004;DP=193;FS=14.207;HRun=1;HaplotypeScore=52.1983;InbreedingCoeff=-0.0965;MQ=76.36;MQ0=2;MQRankSum=-3.317;QD=24.84;ReadPosRankSum=2.429;VQSLOD=3.4453;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,1:11:27.05:352,27,0	1/1:2,0:2:6.01:66,6,0	0/1:13,1:14:21.58:109,0,22	0/1:11,0:11:23.54:61,0,24	./.	1/1:7,0:7:21.07:291,21,0	1/1:6,0:6:15.02:188,15,0	1/1:19,0:17:51.12:652,51,0	1/1:2,0:2:6.02:83,6,0	1/1:9,0:9:27.07:343,27,0	1/1:5,1:6:2.94:20,3,0	1/1:3,1:4:8.99:103,9,0	1/1:5,0:5:15.03:190,15,0	1/1:4,0:4:6.02:83,6,0	1/1:5,1:6:18:209,18,0	1/1:2,1:3:8.99:103,9,0	1/1:3,1:4:11.98:126,12,0	1/1:4,0:4:5.95:42,6,0	1/1:12,1:13:32.13:429,32,0	1/1:3,0:3:3:25,3,0	1/1:13,0:13:21.92:252,22,0	1/1:4,1:5:5.90:38,6,0	1/1:7,0:7:2.54:41,3,0	1/1:8,0:8:8.97:103,9,0	1/1:3,0:3:3.01:42,3,0	1/1:6,1:7:21:267,21,0	1/1:3,2:5:11.97:125,12,0	1/1:9,0:9:27.09:373,27,0
chr10	97012293	.	TTG	T	3528.87	PASS	AC=44;AF=0.880;AN=50;BaseQRankSum=-3.632;DP=179;FS=9.150;HRun=0;HaplotypeScore=56.5997;InbreedingCoeff=0.5297;MQ=75.96;MQ0=2;MQRankSum=-6.940;QD=24.85;ReadPosRankSum=1.040;VQSLOD=3.9481;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:11:24.06:253,24,0	1/1:0,1:1:3.01:34,3,0	0/0:12,0:12:22.58:0,23,123	0/0:10,0:10:15.09:0,15,54	./.	1/1:0,7:7:21.06:226,21,0	1/1:0,6:6:15.01:151,15,0	1/1:0,18:16:48.13:572,48,0	1/1:0,2:2:6.02:65,6,0	1/1:0,8:8:24.07:273,24,0	0/0:1,5:6:0:0,0,0	1/1:1,3:4:6.02:63,6,0	1/1:0,4:4:12.03:127,12,0	1/1:0,4:4:6.01:64,6,0	1/1:1,5:6:15.02:152,15,0	1/1:1,2:3:6.02:65,6,0	1/1:1,3:4:8.97:88,9,0	1/1:0,3:3:5.99:59,6,0	1/1:1,11:12:30.10:395,30,0	./.	1/1:1,12:13:21.01:209,21,0	./.	1/1:0,6:6:3.01:33,3,0	1/1:1,6:7:6.01:61,6,0	1/1:0,2:2:3.01:32,3,0	1/1:1,6:7:18.06:214,18,0	1/1:2,3:5:6.02:68,6,0	1/1:0,9:9:27.08:324,27,0
chr10	97012621	.	CTG	C	404.51	PASS	AB=0.967;AC=10;AF=0.179;AN=56;BaseQRankSum=4.955;DP=298;FS=7.779;HRun=0;HaplotypeScore=42.0819;InbreedingCoeff=0.4501;MQ=55.87;MQ0=9;MQRankSum=1.298;QD=3.26;ReadPosRankSum=-0.305;VQSLOD=0.3866;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,1:15:5.23:0,5,599	0/0:4,0:4:12.04:0,12,196	0/1:37,0:19:1.02:1,0,268	0/1:46,1:26:27.61:28,0,301	0/0:3,0:3:9.03:0,9,144	0/0:6,0:6:18.06:0,18,285	0/0:16,0:16:42.14:0,42,684	1/1:4,7:11:11.99:129,12,0	0/0:8,0:8:21.07:0,21,339	0/0:11,0:11:30.08:0,30,444	0/0:4,0:4:12.04:0,12,193	0/0:9,0:9:27.02:0,27,409	0/0:5,0:5:12.04:0,12,196	0/0:5,0:5:15.05:0,15,244	0/0:8,0:8:24.08:0,24,390	0/0:4,0:4:12.04:0,12,196	0/0:13,1:14:5.22:0,5,599	1/1:0,8:8:21.07:258,21,0	0/0:12,0:10:27.09:0,27,430	0/1:8,0:8:12.95:13,0,281	0/0:13,0:13:36.12:0,36,585	0/1:7,1:8:12.86:13,0,292	0/0:6,0:6:15.05:0,15,241	0/0:13,0:13:39.13:0,39,628	0/0:8,0:8:24.07:0,24,368	0/0:5,0:5:15.05:0,15,244	0/0:5,0:5:15.05:0,15,228	1/1:0,3:3:9.03:111,9,0
chr10	97014102	.	A	AT	1609.88	PASS	AB=0.754;AC=9;AF=0.161;AN=56;BaseQRankSum=-8.364;DP=588;FS=7.096;HRun=12;HaplotypeScore=60.7323;InbreedingCoeff=0.5722;MQ=71.57;MQ0=0;MQRankSum=-0.940;QD=11.67;ReadPosRankSum=-0.858;VQSLOD=2.7784;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,34:47:69.11:820,69,0	0/0:7,0:7:17.89:0,18,131	0/0:13,1:14:12.96:0,13,76	0/0:7,0:8:5.31:0,5,57	0/0:23,2:25:30.43:0,30,386	0/0:26,1:29:37.52:0,38,420	0/0:18,2:20:18.53:0,19,299	0/1:15,13:28:7.34:241,0,7	0/0:26,0:26:56.57:0,57,416	0/0:15,0:15:29.81:0,30,219	0/0:15,0:15:35.71:0,36,261	0/0:20,0:20:35.69:0,36,262	0/0:19,0:20:34.74:0,35,247	0/0:22,0:24:51.73:0,52,362	0/0:22,0:22:50.66:0,51,372	1/1:4,12:16:11.01:256,11,0	0/0:24,1:25:33.29:0,33,401	1/1:4,19:23:26.17:416,26,0	0/0:16,0:16:5.65:0,6,196	0/0:37,0:37:80.38:0,80,589	0/0:19,1:21:14.51:0,15,258	0/0:24,0:24:50.59:0,51,372	0/0:17,0:18:40.77:0,41,288	0/0:26,0:26:47.48:0,47,343	0/1:16,3:19:10.63:11,0,259	0/0:21,0:21:50.66:0,51,370	0/0:16,0:14:29.75:0,30,219	0/1:3,2:5:20.22:20,0,35
chr10	97015184	.	CTG	C	195.04	PASS	AB=0.900;AC=4;AF=0.071;AN=56;BaseQRankSum=7.484;DP=621;FS=1.805;HRun=0;HaplotypeScore=99.5115;InbreedingCoeff=0.4533;MQ=60.10;MQ0=15;MQRankSum=-4.822;QD=3.55;ReadPosRankSum=-1.581;VQSLOD=2.3057;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:30.01:0,30,455	0/0:9,0:9:21.06:0,21,337	0/0:34,0:18:33.06:0,33,634	0/0:49,3:33:40.94:0,41,1127	0/0:14,0:14:33.07:0,33,511	0/0:12,0:11:27.09:0,27,483	0/0:26,0:25:69.24:0,69,1251	0/1:33,0:32:55.07:55,0,90	0/0:21,0:21:60.21:0,60,1073	0/0:30,0:28:78.26:0,78,1368	0/0:16,0:16:45.12:0,45,768	0/0:17,0:17:45.13:0,45,770	0/0:23,0:23:64.11:0,64,1117	0/0:19,0:19:54.15:0,54,910	0/0:19,0:19:54.18:0,54,953	0/0:21,0:21:18.06:0,18,329	0/0:30,0:30:78.27:0,78,1405	0/1:9,3:11:38.59:86,0,39	0/0:13,0:8:24.08:0,24,416	0/0:15,0:15:36.12:0,36,640	0/0:36,0:33:71.71:0,72,1204	0/0:21,0:20:60.18:0,60,1018	0/0:15,0:15:33.10:0,33,557	0/0:37,0:36:81.17:0,81,1430	0/0:16,0:16:33.09:0,33,566	0/0:31,0:31:87.30:0,87,1502	0/0:17,0:17:48:0,48,869	1/1:10,0:9:20.28:168,20,0
chr10	97015222	.	CTGTG	C	268.50	PASS	AB=1.000;AC=11;AF=0.229;AN=48;BaseQRankSum=-0.184;DP=646;FS=17.489;HRun=0;HaplotypeScore=101.9570;InbreedingCoeff=-0.0065;MQ=51.31;MQ0=62;MQRankSum=-0.771;QD=1.08;ReadPosRankSum=-4.052;VQSLOD=-0.4354;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:6:3.48:0,3,35	./.	./.	0/0:12,0:12:8.62:0,9,116	0/0:17,0:13:3.01:0,3,39	0/0:30,0:22:3.01:0,3,38	./.	0/0:23,0:21:11.06:0,11,174	0/1:29,0:26:15.61:16,0,148	0/1:14,0:14:26.57:39,0,27	0/0:21,0:20:18.51:0,19,318	0/1:22,0:21:31.52:32,0,106	0/0:20,0:18:23.78:0,24,310	0/0:22,0:21:4.35:0,4,26	0/0:21,0:19:3.01:0,3,50	0/1:34,0:32:26.64:27,0,156	0/1:15,0:12:0.44:111,0,0	1/1:16,4:14:8.62:96,9,0	0/0:14,0:12:8.88:0,9,196	0/1:43,0:36:22.91:23,0,179	0/0:24,0:22:15.05:0,15,243	0/0:13,0:13:14.39:0,14,168	0/1:48,0:45:50.50:51,0,384	0/0:15,0:11:3.01:0,3,65	1/1:24,0:23:0.70:5,1,0	0/0:22,0:20:12.02:0,12,171	0/0:9,0:5:2.98:0,3,21
chr10	97016439	.	A	AAT	5178.60	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-14.497;DP=651;FS=0.868;HRun=0;HaplotypeScore=70.6736;InbreedingCoeff=0.9985;MQ=90.23;MQ0=1;MQRankSum=-2.793;QD=49.79;ReadPosRankSum=-0.341;VQSLOD=5.3631;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:21:54.19:1042,54,0	0/0:7,0:7:21.06:0,21,302	0/0:21,0:21:54.14:0,54,766	0/0:28,0:28:59.57:0,60,953	0/0:25,0:25:66.22:0,66,1006	0/0:25,0:25:66.22:0,66,1010	0/0:21,0:21:63.21:0,63,945	1/1:0,30:30:90.29:1704,90,0	0/0:22,0:22:66.22:0,66,1007	0/0:31,0:31:93.31:0,93,1403	0/0:20,0:20:57.19:0,57,872	0/0:24,0:24:69.20:0,69,1034	0/0:33,0:33:96.33:0,96,1469	0/0:29,0:29:87.29:0,87,1313	0/0:21,0:21:60.20:0,60,899	1/1:0,15:15:36.12:695,36,0	0/0:31,0:31:87.24:0,87,1246	1/1:3,25:28:66.23:1274,66,0	0/0:23,0:23:66.21:0,66,991	0/0:26,0:26:75.25:0,75,1126	0/0:21,0:21:63.21:0,63,962	0/0:36,0:36:99:0,105,1546	0/0:15,0:15:42.13:0,42,622	0/0:23,0:23:66.20:0,66,962	0/0:12,0:12:36.12:0,36,551	0/0:29,0:29:87.30:0,87,1332	0/0:24,0:24:72.23:0,72,1082	1/1:1,9:9:24.08:463,24,0
chr10	97016547	.	C	CA	4649.68	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-12.315;DP=558;FS=0.000;HRun=0;HaplotypeScore=49.4794;InbreedingCoeff=0.9993;MQ=100.43;MQ0=0;MQRankSum=-2.354;QD=44.71;ReadPosRankSum=-0.050;VQSLOD=4.6622;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:93.32:1486,93,0	0/0:11,0:11:33.11:0,33,462	0/0:34,0:34:78.70:0,79,1233	0/0:26,0:26:75.17:0,75,960	0/0:23,0:23:69.22:0,69,947	0/0:24,0:24:72.24:0,72,1005	0/0:17,0:17:51.17:0,51,713	1/1:1,23:24:69.24:1101,69,0	0/0:20,0:20:60.20:0,60,839	0/0:22,0:22:60.20:0,60,839	0/0:9,0:9:27.09:0,27,378	0/0:17,0:17:51.17:0,51,709	0/0:23,0:23:63.21:0,63,876	0/0:17,0:17:48.15:0,48,656	0/0:17,0:17:51.16:0,51,697	1/1:0,23:23:66.23:1055,66,0	0/0:32,0:32:96.30:0,96,1325	1/1:0,13:13:36.12:576,36,0	0/0:19,0:19:54.18:0,54,754	0/0:23,0:23:69.23:0,69,960	0/0:25,0:25:75.25:0,75,1046	0/0:16,0:16:48.15:0,48,655	0/0:10,0:10:30.10:0,30,415	0/0:18,0:18:54.18:0,54,755	0/0:16,0:16:45.15:0,45,627	0/0:17,0:17:51.17:0,51,714	0/0:18,0:18:54.18:0,54,753	1/1:0,10:10:27.09:432,27,0
chr10	97018214	.	CT	C	513.32	PASS	AB=0.922;AC=7;AF=0.125;AN=56;BaseQRankSum=8.420;DP=414;FS=4.147;HRun=12;HaplotypeScore=51.0188;InbreedingCoeff=0.5599;MQ=73.10;MQ0=3;MQRankSum=1.180;QD=8.70;ReadPosRankSum=1.689;VQSLOD=2.3642;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:28:65.73:510,66,0	0/1:4,0:5:0.84:1,0,25	0/1:13,1:13:8.09:8,0,65	0/1:6,0:4:2.69:4,0,3	0/0:11,0:11:24.04:0,24,238	0/0:29,0:29:72.07:0,72,700	0/0:11,1:11:0.80:0,1,183	0/0:8,0:31:66.53:0,67,390	0/0:8,0:9:23.87:0,24,221	0/0:20,1:21:21.84:0,22,395	0/0:14,0:14:39.07:0,39,391	0/0:8,0:8:15.40:0,15,166	0/0:16,0:16:26.23:0,26,407	0/0:10,0:10:24.02:0,24,235	0/0:7,0:7:21:0,21,203	1/1:0,6:6:14.94:116,15,0	0/0:29,0:29:63.05:0,63,618	0/0:21,0:22:50.22:0,50,532	0/0:20,0:18:42.03:0,42,402	0/0:14,1:15:9.89:0,10,281	0/0:4,0:4:9.02:0,9,91	0/0:4,0:4:12.02:0,12,122	0/0:8,0:8:21.04:0,21,213	0/0:6,0:6:15.03:0,15,152	0/0:22,0:22:54.56:0,55,541	0/0:26,1:27:42.90:0,43,611	0/0:18,0:18:39.08:0,39,395	0/0:3,0:11:19.71:0,20,100
chr10	97027123	.	GAGGC	G	137.38	PASS	AB=0.930;AC=5;AF=0.089;AN=56;BaseQRankSum=5.409;DP=575;FS=0.000;HRun=0;HaplotypeScore=101.8906;InbreedingCoeff=0.1508;MQ=46.89;MQ0=42;MQRankSum=-4.283;QD=2.18;ReadPosRankSum=-1.828;VQSLOD=1.4877;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:65.87:0,66,1476	0/0:4,0:3:9.03:0,9,246	0/0:40,0:3:3.54:0,4,98	0/0:49,1:5:6.24:0,6,29	0/0:11,0:11:21.07:0,21,573	0/0:9,0:9:27.05:0,27,643	0/0:32,0:30:80.76:0,81,1915	0/1:19,4:14:99:139,0,347	0/0:19,0:19:38.20:0,38,1279	0/0:14,0:12:29.64:0,30,684	0/0:8,0:6:15.05:0,15,409	0/0:17,0:16:45.15:0,45,1188	0/0:11,0:11:33.10:0,33,763	0/0:21,0:18:50.37:0,50,1201	0/0:27,0:24:49.29:0,49,1181	0/1:20,0:17:26.59:27,0,722	0/0:23,1:24:60.04:0,60,1390	0/1:14,1:14:67.76:68,0,468	0/0:31,0:16:18.53:0,19,399	0/0:7,0:6:15.05:0,15,395	0/0:59,0:53:99:0,129,3250	0/0:19,0:18:39.08:0,39,956	0/0:6,0:5:8.98:0,9,239	0/0:31,0:31:75.26:0,75,1924	0/0:7,0:6:14.99:0,15,280	0/0:23,0:19:54.18:0,54,1310	0/0:10,0:9:27.09:0,27,719	1/1:5,0:4:2.80:13,3,0
chr10	97027135	.	C	CAG	149.51	PASS	AB=0.994;AC=6;AF=0.107;AN=56;BaseQRankSum=5.047;DP=601;FS=0.000;HRun=0;HaplotypeScore=96.8075;InbreedingCoeff=0.5514;MQ=50.65;MQ0=38;MQRankSum=-3.665;QD=1.37;ReadPosRankSum=-3.461;VQSLOD=0.0797;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:49.12:0,49,794	0/0:5,0:4:9:0,9,106	0/0:62,0:6:11.65:0,12,101	0/1:74,1:11:10.84:11,0,169	0/0:12,0:12:24.08:0,24,336	0/0:11,0:11:29.99:0,30,394	0/0:30,0:29:67.76:0,68,908	1/1:10,5:8:12.04:215,12,0	0/0:20,0:20:57.14:0,57,732	0/1:13,0:11:4.38:4,0,299	0/0:11,0:9:18.06:0,18,250	0/0:15,0:15:45.14:0,45,613	0/0:9,0:9:27.09:0,27,376	0/0:16,0:15:44.82:0,45,599	0/0:22,1:22:39.08:0,39,682	0/0:22,0:19:24.04:0,24,373	0/0:21,0:21:57.12:0,57,735	0/0:14,0:13:28.05:0,28,376	0/0:30,0:14:15.05:0,15,208	0/0:11,0:9:21.04:0,21,259	0/0:52,0:47:99:0,117,1575	0/0:16,0:16:39.04:0,39,532	0/0:6,0:6:7.90:0,8,90	0/0:30,0:30:63.21:0,63,876	0/0:7,0:6:18.06:0,18,251	0/0:20,0:19:51.16:0,51,698	0/0:15,0:14:42.14:0,42,584	1/1:4,1:5:5.67:35,6,0
chr10	97027179	.	GAGAGGC	G	425.08	PASS	AB=0.882;AC=5;AF=0.089;AN=56;BaseQRankSum=5.228;DP=598;FS=2.624;HRun=0;HaplotypeScore=106.8996;InbreedingCoeff=0.1794;MQ=48.01;MQ0=67;MQRankSum=-5.751;QD=6.07;ReadPosRankSum=1.452;VQSLOD=1.4415;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,7:21:1.25:60,1,0	0/0:5,0:3:3.01:0,3,99	0/0:48,0:5:0.47:0,0,1	0/0:65,0:10:8.01:0,8,181	0/0:12,0:12:15.05:0,15,362	0/0:9,0:7:9.03:0,9,159	0/0:28,0:25:27.05:0,27,759	0/0:24,0:18:27.09:0,27,708	0/0:23,0:23:51.18:0,51,1609	0/0:18,0:17:27.97:0,28,682	0/0:14,0:13:12.04:0,12,323	0/0:15,0:14:36.12:0,36,1069	0/0:12,0:12:27.09:0,27,828	0/0:13,0:12:12.04:0,12,361	0/0:26,0:24:48.15:0,48,1437	0/1:10,12:17:63.03:415,0,63	0/0:27,0:27:48.16:0,48,1493	0/1:8,0:15:9.91:10,0,55	0/0:32,0:14:18.06:0,18,495	0/0:8,0:8:6.02:0,6,172	0/0:46,0:41:63.22:0,63,1869	0/0:13,0:11:24.08:0,24,622	0/0:9,0:7:12.03:0,12,323	0/0:22,0:23:34:0,34,973	0/0:18,0:15:18.53:0,19,523	0/0:24,0:16:24.08:0,24,682	0/0:15,0:15:33.11:0,33,1020	0/1:8,0:8:46.29:46,0,390
chr10	97028304	.	AGTGTGTGTGTGTGTGTGTGCGCGCGCGCGC	A	1874.82	PASS	AB=0.988;AC=8;AF=0.148;AN=54;BaseQRankSum=4.458;DP=619;FS=22.620;HRun=0;HaplotypeScore=364.8518;InbreedingCoeff=0.4635;MQ=50.94;MQ0=3;MQRankSum=-4.698;QD=12.75;ReadPosRankSum=-2.268;VQSLOD=0.7214;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,19:34:3.01:126,3,0	0/0:12,0:11:21.91:0,22,1001	0/1:15,0:7:0:0,0,0	./.	0/0:16,0:16:19.65:0,20,1051	0/0:16,0:16:21.06:0,21,993	0/0:21,0:21:22.34:0,22,2063	0/1:39,0:38:0.26:0,0,1239	0/0:15,0:15:27.09:0,27,2370	0/0:38,0:38:75.21:0,75,6527	0/0:17,0:17:42.14:0,42,4114	0/0:34,0:34:0.30:0,0,2592	0/0:10,0:10:21.79:0,22,1075	0/0:31,0:32:51.13:0,51,3283	0/0:21,0:21:27.55:0,28,1742	1/1:7,17:24:24.08:1852,24,0	0/0:26,0:26:2.72:0,3,3041	0/0:25,0:25:32.83:0,33,2181	0/1:18,0:19:3.09:3,0,2264	0/0:23,0:22:36.07:0,36,2820	0/0:27,0:26:24.55:0,25,1491	0/0:15,0:14:24.08:0,24,1563	0/0:17,0:16:23.80:0,24,1586	0/0:19,0:19:9.03:0,9,466	0/0:28,0:28:59.88:0,60,6708	0/0:31,0:31:75.26:0,75,6372	0/0:19,0:19:27.96:0,28,1285	0/1:13,0:16:1.53:2,0,884
chr10	97028322	.	TGCGCGCGCGCGC	T	1590.39	PASS	AB=0.938;AC=17;AF=0.304;AN=56;BaseQRankSum=6.736;DP=588;FS=4.843;HRun=0;HaplotypeScore=208.4596;InbreedingCoeff=-0.0495;MQ=47.63;MQ0=3;MQRankSum=-6.929;QD=5.16;ReadPosRankSum=-2.817;VQSLOD=2.1736;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:3.01:50,3,0	0/0:11,0:10:24.46:0,24,695	1/1:8,0:1:0.47:1,0,0	0/0:8,0:2:2.77:0,3,47	0/0:11,5:16:23.81:0,24,651	0/1:18,1:19:97.02:97,0,630	0/1:23,1:24:57.53:58,0,1117	0/1:37,0:36:99:159,0,1024	0/1:10,3:15:70.43:70,0,1162	0/0:31,0:31:87.26:0,87,4159	0/0:14,0:14:42.14:0,42,2149	0/1:32,0:33:9.24:9,0,1418	0/0:12,7:19:27.81:0,28,773	0/0:28,0:28:54.61:0,55,1969	0/0:22,1:23:30.87:0,31,1115	1/1:21,0:21:24.08:677,24,0	0/1:23,0:23:95.44:95,0,1641	0/0:25,0:25:32.63:0,33,1097	0/1:15,1:16:99:108,0,1394	0/0:21,0:20:35.72:0,36,1438	0/0:20,0:19:24.55:0,25,872	0/1:10,5:14:64.51:65,0,870	0/0:18,0:17:30.07:0,30,1095	0/0:19,0:19:8.80:0,9,337	0/0:27,0:27:69:0,69,3744	0/1:35,0:35:99:138,0,3465	0/1:18,0:18:99:198,0,559	0/1:17,0:17:26.43:26,0,554
chr10	97028334	.	C	CGTGTGTGTGTGTGTGT	5867.42	PASS	AB=0.562;AC=32;AF=0.615;AN=52;BaseQRankSum=-0.811;DP=583;FS=6.979;HRun=0;HaplotypeScore=234.1829;InbreedingCoeff=0.6345;MQ=45.96;MQ0=2;MQRankSum=-6.046;QD=15.12;ReadPosRankSum=-3.478;VQSLOD=2.5377;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:4,5:9:0.45:1,0,0	./.	0/0:6,0:1:3.01:0,3,48	1/1:14,1:17:1.62:22,2,0	1/1:7,0:21:6.02:285,6,0	1/1:18,0:36:11.37:369,11,0	0/0:14,0:26:15.47:0,15,245	1/1:16,0:16:11.41:250,11,0	0/0:24,0:25:45.10:0,45,1646	0/0:12,0:13:18.06:0,18,728	1/1:11,0:33:7.47:243,7,0	1/1:19,0:20:14.91:141,15,0	0/1:10,0:29:0:0,0,0	0/0:6,0:24:0.37:0,0,1	0/0:17,0:17:24.08:0,24,483	1/1:16,0:30:15.05:598,15,0	0/1:2,0:26:6.55:134,0,7	1/1:20,0:20:46.47:925,46,0	1/1:17,0:17:9:141,9,0	1/1:17,0:18:6.62:121,7,0	1/1:15,0:15:1.57:135,2,0	0/0:6,0:16:0.45:0,0,1	1/1:11,0:23:0.45:1,0,0	0/0:22,0:25:51.18:0,51,2121	1/1:20,0:38:42.57:1807,43,0	1/1:4,0:17:15.51:693,16,0	0/0:11,0:15:15.05:0,15,389
chr10	97029221	.	TGAGAGAGAGAGAGA	T	549.35	PASS	AB=0.849;AC=3;AF=0.056;AN=54;BaseQRankSum=4.971;DP=438;FS=1.420;HRun=0;HaplotypeScore=149.6046;InbreedingCoeff=-0.0750;MQ=45.58;MQ0=38;MQRankSum=-2.923;QD=13.08;ReadPosRankSum=0.078;VQSLOD=2.3359;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:8:6.02:0,6,299	0/0:7,0:7:15.05:0,15,605	./.	0/0:2,0:2:6.02:0,6,379	0/0:11,0:8:15.05:0,15,805	0/0:18,0:16:21.91:0,22,904	0/0:24,0:22:20.49:0,20,1251	0/1:16,0:16:18.24:18,0,38	0/0:17,0:16:22.28:0,22,712	0/0:20,0:19:39.13:0,39,1952	0/0:11,0:13:18.06:0,18,1105	0/0:19,0:18:20.86:0,21,1114	0/0:12,0:12:19.03:0,19,885	0/0:7,0:6:6.02:0,6,356	0/0:16,0:13:15.05:0,15,710	0/0:12,0:12:11.99:0,12,624	0/0:28,0:28:54.61:0,55,2512	0/1:7,4:12:23.29:443,0,23	0/0:18,0:17:30.10:0,30,1462	0/0:15,0:12:18.06:0,18,768	0/0:26,0:23:30.02:0,30,1468	0/0:20,0:18:33.11:0,33,1919	0/0:12,0:10:12.51:0,13,664	0/0:23,0:19:21.07:0,21,931	0/0:21,0:20:18.06:0,18,528	0/0:21,0:19:48.08:0,48,2092	0/0:23,0:23:28.81:0,29,1223	0/1:10,0:7:99:187,0,173
chr10	97036465	.	TGTA	T	3115.88	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=11.349;DP=953;FS=0.473;HRun=0;HaplotypeScore=125.6777;InbreedingCoeff=0.9527;MQ=57.23;MQ0=20;MQRankSum=0.736;QD=38.47;ReadPosRankSum=3.028;VQSLOD=4.5606;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,46:44:73.55:1755,74,0	0/0:8,0:8:21.07:0,21,484	0/0:37,0:4:9.03:0,9,177	0/0:34,0:10:11.99:0,12,192	0/0:17,0:17:45.15:0,45,1037	0/0:35,0:35:99:0,99,2183	0/0:39,0:38:99:0,111,2548	0/0:40,0:40:99:0,111,2543	0/0:48,0:48:99:0,132,2982	0/0:34,0:33:96.32:0,96,2140	0/0:13,0:13:30.99:0,31,688	0/0:44,0:44:99:0,123,2787	0/0:38,0:38:99:0,99,2230	0/0:44,0:44:99:0,126,2794	0/0:51,0:50:99:0,147,3304	1/1:1,32:31:87.30:1483,87,0	0/0:38,0:37:99:0,111,2556	0/0:22,0:21:57.19:0,57,1227	0/0:17,0:15:42.10:0,42,851	0/0:27,0:27:72.45:0,72,1570	0/0:99,0:97:99:0,271,6071	0/0:27,0:27:54.19:0,54,1224	0/0:19,0:19:51.14:0,51,1086	0/0:38,0:38:99:0,108,2371	0/0:30,0:29:81.27:0,81,1803	0/0:33,0:33:96.31:0,96,2122	0/0:30,0:29:87.28:0,87,1931	0/0:10,0:9:24.08:0,24,553
chr10	97037216	.	T	TTG	555.35	PASS	AB=0.876;AC=11;AF=0.196;AN=56;BaseQRankSum=-0.695;DP=735;FS=2.731;HRun=0;HaplotypeScore=99.5611;InbreedingCoeff=0.5322;MQ=59.92;MQ0=7;MQRankSum=-2.265;QD=3.10;ReadPosRankSum=-1.389;VQSLOD=2.1780;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,13:42:10.12:180,10,0	0/0:17,0:17:23.68:0,24,226	0/0:40,0:20:6.01:0,6,62	0/0:38,0:13:2.87:0,3,15	0/0:31,0:34:20.64:0,21,380	0/0:14,0:14:12.03:0,12,135	0/0:25,0:25:21.03:0,21,236	1/1:32,0:30:14.14:95,14,0	0/1:25,1:28:10.55:11,0,316	0/0:30,0:31:20.87:0,21,203	0/0:20,0:20:27.06:0,27,295	0/0:25,0:26:26.90:0,27,284	0/0:22,0:25:44.79:0,45,467	0/0:19,0:19:42.11:0,42,468	0/0:23,0:25:41.78:0,42,433	0/1:10,6:18:74.27:248,0,74	0/0:29,0:30:14.55:0,15,411	1/1:10,1:16:9:79,9,0	0/0:16,0:15:2.11:0,2,32	0/0:29,0:29:27.06:0,27,294	0/0:28,0:28:16.29:0,16,172	0/0:24,0:24:36.09:0,36,395	0/0:24,0:25:35.91:0,36,372	0/0:28,0:28:24.51:0,25,452	0/0:35,0:36:50.97:0,51,554	0/0:26,0:25:21.01:0,21,236	0/1:33,1:34:15.70:16,0,270	1/1:9,0:9:8.95:85,9,0
chr10	97037345	.	T	TTG	740.72	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.127;DP=776;FS=0.724;HRun=0;HaplotypeScore=103.0091;InbreedingCoeff=0.8028;MQ=62.98;MQ0=5;MQRankSum=-2.333;QD=20.02;ReadPosRankSum=-3.177;VQSLOD=2.7656;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:38:83.81:0,84,927	0/0:13,0:13:30.56:0,31,360	0/0:24,0:18:1.83:0,2,239	0/0:23,0:17:19.14:0,19,345	0/0:29,0:30:78.03:0,78,911	0/0:13,0:14:29.91:0,30,325	0/0:16,0:16:41.60:0,42,465	1/1:9,13:22:3.11:465,3,0	0/0:38,0:38:72.27:0,72,1015	0/0:31,0:32:90.07:0,90,1026	0/0:17,0:17:36.08:0,36,409	0/0:38,0:38:96.12:0,96,1119	0/0:34,0:34:84.24:0,84,994	0/0:18,0:19:41.96:0,42,482	0/0:37,0:37:99:0,102,1188	0/0:41,0:43:99:0,108,1228	0/0:30,0:34:79.68:0,80,838	0/0:26,0:26:35.81:0,36,658	0/0:26,0:25:24.58:0,25,397	0/0:22,0:22:48.62:0,49,576	0/0:37,0:36:87.13:0,87,983	0/0:26,0:27:59.83:0,60,657	0/0:28,0:29:59.98:0,60,674	0/0:19,0:21:50.99:0,51,590	0/0:22,0:23:52.22:0,52,581	0/0:34,0:35:46.61:0,47,578	0/0:37,0:38:93.12:0,93,1091	1/1:4,10:13:24.08:384,24,0
chr10	97040409	.	A	AAT	5518.45	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-13.031;DP=691;FS=0.000;HRun=0;HaplotypeScore=76.9606;InbreedingCoeff=0.9995;MQ=80.95;MQ0=0;MQRankSum=-1.569;QD=47.17;ReadPosRankSum=0.309;VQSLOD=5.5457;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:37:90.31:1647,90,0	0/0:14,0:14:42.11:0,42,595	0/0:23,0:23:66.20:0,66,938	0/0:19,0:19:44.51:0,45,619	0/0:27,0:27:75.25:0,75,1104	0/0:25,0:25:75.25:0,75,1104	0/0:15,0:15:45.15:0,45,659	1/1:1,24:24:72.25:1342,72,0	0/0:23,0:23:69.22:0,69,997	0/0:30,0:29:90.30:0,90,1310	0/0:14,0:14:38.62:0,39,553	0/0:18,0:18:54.17:0,54,775	0/0:25,0:25:75.25:0,75,1101	0/0:28,0:28:84.25:0,84,1196	0/0:28,0:28:78.25:0,78,1123	1/1:1,24:26:63.22:1180,63,0	0/0:29,0:29:81.26:0,81,1173	1/1:0,17:17:48.16:899,48,0	0/0:31,0:31:87.27:0,87,1245	0/0:28,0:28:84.25:0,84,1180	0/0:37,0:37:99:0,111,1527	0/0:34,0:34:99:0,99,1380	0/0:22,0:22:66.22:0,66,972	0/0:31,0:31:90.30:0,90,1326	0/0:22,0:22:63.21:0,63,925	0/0:16,0:16:45.15:0,45,663	0/0:35,0:35:99:0,105,1504	1/1:2,10:12:24.08:450,24,0
chr10	97042432	.	ATT	A	1317.66	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=7.184;DP=551;FS=0.000;HRun=14;HaplotypeScore=76.8819;InbreedingCoeff=0.8601;MQ=70.18;MQ0=3;MQRankSum=0.509;QD=9.55;ReadPosRankSum=3.359;VQSLOD=1.8438;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:19:33.11:158,33,0	0/0:8,0:9:26.58:0,27,345	0/0:31,1:16:12.25:0,12,239	0/1:20,0:10:16.37:16,0,35	0/0:3,0:17:45.03:0,45,415	0/0:9,0:13:38.06:0,38,419	0/0:10,0:15:41.09:0,41,480	1/1:12,17:30:16.10:424,16,0	0/0:13,0:15:41.55:0,42,484	0/0:14,0:17:33.09:0,33,423	0/0:29,1:33:52.87:0,53,926	0/0:12,0:14:32.58:0,33,400	0/0:15,0:16:38.56:0,39,433	0/0:17,0:18:50.54:0,51,572	0/0:9,0:10:24.06:0,24,296	1/1:1,1:20:49.65:229,50,0	0/0:21,0:25:56.05:0,56,627	1/1:14,19:33:11.79:422,12,0	0/0:20,0:21:42.09:0,42,489	0/0:27,0:32:76.12:0,76,884	0/0:4,0:7:14.01:0,14,126	0/0:12,0:12:30.07:0,30,372	0/0:18,1:20:26.36:0,26,631	0/0:8,0:9:21.05:0,21,250	0/0:18,0:19:23.03:0,23,553	0/0:20,0:21:47.65:0,48,639	0/0:36,1:38:70.99:0,71,1193	1/1:5,10:16:12.71:242,13,0
chr10	97044019	.	G	GTGTGTCTGTC	1164.17	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=5.176;DP=579;FS=9.038;HRun=0;HaplotypeScore=165.4903;InbreedingCoeff=0.5349;MQ=53.62;MQ0=15;MQRankSum=-2.583;QD=8.89;ReadPosRankSum=-3.415;VQSLOD=1.2935;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:30:53.18:647,0,53	0/0:10,0:10:24.08:0,24,468	0/0:9,0:4:5.61:0,6,94	0/0:17,0:7:14.88:0,15,269	0/0:27,0:26:50.81:0,51,854	0/0:20,0:20:37.93:0,38,839	0/0:18,0:16:31.37:0,31,476	1/1:35,0:34:25.81:152,26,0	0/0:13,0:13:30.06:0,30,565	0/0:31,0:29:68.95:0,69,1304	0/1:16,0:16:34:34,0,498	0/0:17,0:17:25.86:0,26,533	0/0:18,0:18:42.12:0,42,776	0/0:16,0:15:33.11:0,33,795	0/0:18,0:18:42.14:0,42,771	1/1:3,11:19:9.03:282,9,0	0/0:38,0:38:83.37:0,83,1657	0/1:19,0:19:99:136,0,305	0/0:19,0:17:32.52:0,33,568	0/0:18,0:17:48.15:0,48,849	0/0:21,0:20:47.93:0,48,989	0/0:16,0:15:27.05:0,27,517	0/0:23,0:22:60.14:0,60,930	0/0:26,0:25:63.20:0,63,1251	0/0:22,0:22:44.85:0,45,1034	0/0:26,0:25:57.58:0,58,1135	0/0:22,0:22:57.18:0,57,1127	1/1:9,0:7:7.82:63,8,0
chr10	97045362	.	C	CAG	5019.17	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-13.609;DP=665;FS=11.572;HRun=0;HaplotypeScore=72.9290;InbreedingCoeff=0.9958;MQ=77.56;MQ0=1;MQRankSum=0.312;QD=41.48;ReadPosRankSum=0.150;VQSLOD=5.7109;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:34:75.26:1402,75,0	0/0:13,0:13:39.11:0,39,552	0/0:18,0:18:38.75:0,39,510	0/0:13,0:13:27.09:0,27,378	0/0:20,0:20:54.12:0,54,712	0/0:23,0:23:69.22:0,69,994	0/0:26,0:26:69.21:0,69,989	1/1:5,36:43:99:1879,114,0	0/0:26,0:26:72.23:0,72,1036	0/0:35,0:35:99:0,105,1491	0/0:18,0:18:48.15:0,48,686	0/0:30,0:30:87.22:0,87,1180	0/0:20,0:20:57.18:0,57,818	0/0:34,0:34:96.26:0,96,1329	0/0:22,0:22:66.18:0,66,912	1/1:1,20:21:51.17:954,51,0	0/0:18,0:18:54.16:0,54,772	1/1:2,14:16:27.09:504,27,0	0/0:19,0:19:54.13:0,54,749	0/0:24,0:24:66.16:0,66,908	0/0:25,0:25:75.24:0,75,1082	0/0:26,0:26:75.25:0,75,1101	0/0:23,0:23:66.18:0,66,905	0/0:26,0:26:72.17:0,72,1011	0/0:24,0:24:72.24:0,72,1059	0/0:31,0:31:87.28:0,87,1259	0/0:30,0:30:81.27:0,81,1191	1/1:0,6:6:15.05:281,15,0
chr10	97046558	.	CG	C	408.53	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.453;DP=628;FS=8.047;HRun=1;HaplotypeScore=57.2970;InbreedingCoeff=0.9990;MQ=76.71;MQ0=1;MQRankSum=-1.631;QD=29.18;ReadPosRankSum=0.630;VQSLOD=2.6448;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1731	0/0:16,0:16:48.16:0,48,766	0/0:16,0:16:42.11:0,42,646	0/0:10,0:10:30.10:0,30,464	0/0:23,0:23:66.22:0,66,1030	0/0:27,0:27:78.24:0,78,1220	0/0:21,0:21:63.15:0,63,948	0/0:31,0:31:93.28:0,93,1416	0/0:23,0:23:69.17:0,69,1021	0/0:32,0:32:96.02:0,96,1373	0/0:19,0:19:54.18:0,54,862	0/0:12,0:11:33.10:0,33,498	0/0:17,0:17:51.10:0,51,761	0/0:17,0:17:51.17:0,51,810	0/0:22,0:22:66.21:0,66,1024	0/0:14,0:14:42.13:0,42,649	0/0:26,0:26:78.09:0,78,1183	1/1:0,14:14:36.12:503,36,0	0/0:27,0:26:75.23:0,75,1130	0/0:24,0:24:72.23:0,72,1120	0/0:30,0:30:90.29:0,90,1412	0/0:24,0:24:69.24:0,69,1097	0/0:26,0:26:78.21:0,78,1188	0/0:21,0:21:63.21:0,63,1006	0/0:31,0:31:93.28:0,93,1437	0/0:26,0:26:78.27:0,78,1245	0/0:28,0:28:84.27:0,84,1301	0/0:13,0:13:39.13:0,39,622
chr10	97047159	.	CCTGCCTATCTATCTATCTAT	C	275.49	PASS	AB=0.884;AC=6;AF=0.107;AN=56;BaseQRankSum=4.294;DP=642;FS=0.000;HRun=0;HaplotypeScore=268.7302;InbreedingCoeff=0.2281;MQ=53.89;MQ0=37;MQRankSum=-0.785;QD=2.62;ReadPosRankSum=-1.828;VQSLOD=2.0003;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:19:11.47:262,11,0	0/0:7,0:6:18.06:0,18,456	0/1:20,0:16:10.60:11,0,604	0/1:15,0:14:14.16:14,0,404	0/0:18,0:17:36.12:0,36,911	0/0:29,0:25:59.80:0,60,1290	0/0:27,0:25:44.39:0,44,865	0/0:21,0:21:36.08:0,36,610	0/0:28,0:26:69.23:0,69,1496	0/0:33,0:32:78.23:0,78,2118	0/1:25,0:21:10.73:11,0,862	0/0:31,0:29:67.09:0,67,1646	0/0:22,0:21:60.21:0,60,1775	0/0:26,0:26:75.26:0,75,2608	0/0:27,0:24:47.93:0,48,876	0/1:3,20:23:46.15:100,0,46	0/0:17,0:17:45.62:0,46,701	0/0:17,0:17:8.20:0,8,653	0/0:21,0:17:33.58:0,34,612	0/0:18,0:17:27.82:0,28,495	0/0:37,0:33:64.57:0,65,1263	0/0:21,0:19:30.18:0,30,525	0/0:12,0:10:12.93:0,13,288	0/0:38,0:34:81.75:0,82,2324	0/0:33,0:28:51.61:0,52,1172	0/0:23,0:23:14.11:0,14,893	0/0:21,0:18:48.15:0,48,902	0/0:10,0:10:15:0,15,323
chr10	97047163	.	CCTATCTAT	C	1404.40	PASS	AB=1.000;AC=25;AF=0.500;AN=50;BaseQRankSum=0.713;DP=632;FS=5.796;HRun=0;HaplotypeScore=135.6854;InbreedingCoeff=0.5909;MQ=52.17;MQ0=52;MQRankSum=-1.129;QD=5.07;ReadPosRankSum=2.578;VQSLOD=2.0592;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:18:9.03:118,9,0	0/0:8,0:6:3:0,3,25	./.	./.	0/0:18,0:17:5.58:0,6,141	1/1:30,0:25:18:212,18,0	0/0:25,0:23:3.01:0,3,36	0/0:25,0:24:0:0,0,0	1/1:27,0:25:17.96:255,18,0	0/0:35,0:30:12.89:0,13,80	0/0:25,0:19:4.44:0,4,42	0/0:31,0:26:9:0,9,77	0/0:25,0:22:21.07:0,21,347	0/0:25,0:25:33.09:0,33,650	./.	1/1:21,0:21:2.79:32,3,0	1/1:16,0:16:5.99:62,6,0	0/1:15,0:15:42.72:112,0,43	1/1:17,3:15:6.02:79,6,0	1/1:20,0:17:3:26,3,0	1/1:37,0:30:8.98:108,9,0	1/1:21,0:19:1.65:48,2,0	0/0:11,0:9:2.98:0,3,21	0/0:40,0:35:10.51:0,11,281	0/0:33,0:27:15.93:0,16,310	1/1:19,6:23:18.06:298,18,0	1/1:18,0:15:12:141,12,0	1/1:5,0:5:6.02:87,6,0
chr10	97049670	.	GGT	G	549.36	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=4.521;DP=169;FS=21.026;HRun=0;HaplotypeScore=22.9577;InbreedingCoeff=0.6085;MQ=94.00;MQ0=0;MQRankSum=0.215;QD=12.21;ReadPosRankSum=-2.321;VQSLOD=0.6048;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:2.60:10,3,0	0/0:7,0:7:21.04:0,21,308	0/0:9,0:8:15.91:0,16,259	0/0:12,1:13:18.97:0,19,339	0/0:8,0:8:24.07:0,24,383	0/0:3,0:3:6.01:0,6,104	0/0:5,0:5:12:0,12,149	1/1:1,12:13:30.02:365,30,0	0/0:3,0:3:9.03:0,9,150	0/0:4,0:4:12.01:0,12,167	0/0:6,0:6:18.06:0,18,296	0/0:1,0:1:3.01:0,3,49	0/0:5,0:5:15.05:0,15,248	0/0:5,0:5:15.05:0,15,258	0/0:5,0:5:15.05:0,15,243	1/1:10,0:10:20.01:169,20,0	0/0:4,0:4:12.01:0,12,177	0/1:10,0:10:34.04:58,0,34	0/0:3,0:3:9.03:0,9,156	0/0:9,0:9:27.01:0,27,405	0/0:2,0:2:6.02:0,6,104	0/0:5,0:5:14.94:0,15,214	0/0:3,0:3:8.97:0,9,97	0/0:5,0:5:14.97:0,15,157	0/0:2,0:2:6.02:0,6,100	0/0:9,0:9:26.97:0,27,380	0/0:8,0:8:21.53:0,22,325	1/1:1,7:8:6.02:92,6,0
chr10	97049671	.	GT	G	525.81	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.325;DP=170;FS=16.567;HRun=1;HaplotypeScore=19.9988;InbreedingCoeff=0.7455;MQ=91.95;MQ0=0;MQRankSum=-0.268;QD=11.43;ReadPosRankSum=-3.079;VQSLOD=-0.6264;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:4:3.01:41,3,0	0/0:7,0:7:21.04:0,21,253	0/0:8,1:8:15.60:0,16,214	0/0:13,0:13:23.82:0,24,319	0/0:8,0:8:24.07:0,24,306	0/0:3,0:3:6.01:0,6,82	0/0:4,0:4:12.01:0,12,129	1/1:12,1:13:29.84:225,30,0	0/0:3,0:3:9.03:0,9,120	0/0:4,0:4:12.01:0,12,132	0/0:6,0:6:18.05:0,18,226	0/0:1,0:1:3.01:0,3,40	0/0:5,0:5:15.04:0,15,188	0/0:5,0:5:15.05:0,15,202	0/0:5,0:5:15.05:0,15,196	1/1:8,2:10:23.92:235,24,0	0/0:4,0:4:12.01:0,12,144	1/1:10,1:11:17.54:139,18,0	0/0:3,0:3:9.03:0,9,123	0/0:9,0:9:27.01:0,27,327	0/0:2,0:2:6.02:0,6,82	0/0:5,0:5:14.87:0,15,165	0/0:3,0:3:8.97:0,9,86	0/0:5,0:5:14.96:0,15,136	0/0:2,0:2:6.02:0,6,81	0/0:9,0:9:26.96:0,27,314	0/0:9,0:9:12.45:0,12,263	1/1:7,1:8:5.95:43,6,0
chr10	97050905	.	CAT	C	1789.82	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.356;DP=672;FS=3.578;HRun=0;HaplotypeScore=79.4309;InbreedingCoeff=0.9998;MQ=85.25;MQ0=0;MQRankSum=-4.684;QD=34.42;ReadPosRankSum=1.172;VQSLOD=5.7759;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:60.16:837,60,0	0/0:12,0:12:36.12:0,36,660	0/0:25,0:25:69.23:0,69,1212	0/0:18,0:18:51.12:0,51,854	0/0:32,0:32:93.31:0,93,1664	0/0:28,0:28:84.29:0,84,1530	0/0:18,0:18:54.19:0,54,990	0/0:39,0:39:99:0,99,1748	0/0:31,0:31:93.32:0,93,1698	0/0:20,0:20:60.21:0,60,1101	0/0:14,0:14:42.14:0,42,770	0/0:19,0:19:57.20:0,57,1045	0/0:22,0:22:63.20:0,63,1123	0/0:26,0:26:75.26:0,75,1359	0/0:21,0:21:60.19:0,60,1064	1/1:0,27:27:75.25:1075,75,0	0/0:26,0:26:72.25:0,72,1320	0/0:18,0:18:51.16:0,51,904	0/0:21,0:21:57.20:0,57,1037	0/0:33,0:33:99:0,99,1807	0/0:43,0:43:99:0,123,2255	0/0:19,0:19:51.17:0,51,922	0/0:22,0:22:60.21:0,60,1088	0/0:18,0:18:48.16:0,48,858	0/0:18,0:18:54.19:0,54,974	0/0:38,0:38:99:0,111,2034	0/0:27,0:27:75.26:0,75,1372	0/0:12,0:12:36.12:0,36,660
chr10	97051164	.	AACACCACACACAC	A	1273.35	PASS	AB=0.856;AC=9;AF=0.161;AN=56;BaseQRankSum=7.711;DP=593;FS=12.961;HRun=0;HaplotypeScore=186.6934;InbreedingCoeff=0.5074;MQ=71.29;MQ0=31;MQRankSum=-5.019;QD=10.27;ReadPosRankSum=0.553;VQSLOD=2.0121;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,27:29:3.01:119,3,0	0/1:8,0:8:99:129,0,160	0/0:42,0:26:69.21:0,69,890	0/0:54,0:28:66.13:0,66,833	0/0:21,0:21:54.17:0,54,1993	0/0:18,0:18:54.18:0,54,1982	0/0:31,0:31:74.97:0,75,1795	1/1:1,0:25:39.12:495,39,0	0/0:23,0:23:57.18:0,57,2384	0/0:14,0:14:39.13:0,39,1185	0/0:13,0:12:33.07:0,33,1170	0/0:17,0:17:48.03:0,48,1586	0/0:15,0:15:41.31:0,41,1523	0/0:14,0:14:41.50:0,42,1373	0/0:26,0:26:66.18:0,66,2336	0/1:6,19:20:28.05:336,0,28	0/0:23,0:22:66.18:0,66,2786	0/1:18,0:18:99:263,0,467	0/0:19,0:19:50.38:0,50,1183	0/0:9,0:9:21.07:0,21,491	0/0:28,0:27:65.86:0,66,2452	0/0:18,0:18:51.17:0,51,1280	0/0:12,0:11:30.06:0,30,610	0/0:27,0:27:72.08:0,72,3043	0/0:8,0:8:24.08:0,24,1110	0/0:19,0:18:45.15:0,45,1732	0/0:18,0:18:51.17:0,51,1632	1/1:5,0:2:6.02:76,6,0
chr10	97051168	.	CCACACACACACACACACA	C	601.51	PASS	AB=0.667;AC=7;AF=0.135;AN=52;BaseQRankSum=5.365;DP=582;FS=1.359;HRun=0;HaplotypeScore=230.3410;InbreedingCoeff=0.6106;MQ=65.39;MQ0=33;MQRankSum=-5.325;QD=6.40;ReadPosRankSum=0.017;VQSLOD=2.7460;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:28:2.96:19,3,0	0/1:4,0:8:78.81:79,0,115	./.	0/0:49,0:23:3.01:0,3,58	0/0:20,0:21:35.09:0,35,2205	0/0:19,0:19:42.14:0,42,2361	0/0:27,0:29:29.64:0,30,1668	0/0:27,0:26:3.01:0,3,70	0/0:20,0:21:39.09:0,39,2644	0/0:15,0:15:28.34:0,28,1537	0/0:13,0:12:21.07:0,21,1464	0/0:16,0:16:27.08:0,27,1595	0/0:15,0:15:27.07:0,27,1676	0/0:14,0:14:18.06:0,18,1311	0/0:24,0:24:36.11:0,36,2491	1/1:21,0:20:8.59:49,9,0	0/0:25,0:24:54.19:0,54,3617	1/1:14,4:19:11.09:580,11,0	0/0:17,0:17:21.06:0,21,1068	0/0:8,0:8:9.01:0,9,387	0/0:30,0:28:44.84:0,45,2665	0/0:18,0:18:12.04:0,12,955	0/0:12,0:11:12.04:0,12,501	0/0:25,0:26:63.22:0,63,3885	0/0:9,0:9:21.07:0,21,1366	0/0:18,0:17:31.66:0,32,2052	0/0:18,0:18:27.07:0,27,1649	./.
chr10	97054643	.	CCTTTT	C	474.11	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=3.837;DP=435;FS=2.551;HRun=0;HaplotypeScore=88.1045;InbreedingCoeff=0.6013;MQ=79.59;MQ0=6;MQRankSum=-1.272;QD=8.17;ReadPosRankSum=-0.514;VQSLOD=2.2441;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:42.14:0,42,672	0/0:7,0:7:12.04:0,12,276	0/1:34,0:20:8.47:8,0,222	0/0:35,0:20:21.93:0,22,204	0/0:16,0:15:33.08:0,33,756	0/0:18,0:18:51.17:0,51,1347	0/0:3,0:3:9.03:0,9,222	0/0:32,0:32:57.19:0,57,1087	0/0:10,0:10:24.08:0,24,627	0/0:14,0:14:30.10:0,30,687	0/0:18,0:17:33.10:0,33,706	0/0:15,0:15:42.14:0,42,1011	0/0:12,0:12:24.08:0,24,529	0/0:15,0:15:27.09:0,27,605	0/0:15,0:15:33.11:0,33,675	0/0:14,0:14:30.10:0,30,469	0/0:22,0:22:51.18:0,51,1332	1/1:5,19:24:30.10:567,30,0	0/0:14,0:12:33.11:0,33,723	0/0:10,0:10:24.08:0,24,543	0/0:9,0:9:24.08:0,24,444	0/0:13,0:13:24.07:0,24,405	0/0:10,0:10:12.04:0,12,287	0/0:5,0:5:15.05:0,15,373	0/0:11,0:11:27.09:0,27,692	0/0:16,0:16:36.12:0,36,833	0/0:13,0:13:24.08:0,24,619	0/0:8,0:8:15.05:0,15,261
chr10	97054667	.	CTTT	C	1139.94	PASS	AB=0.974;AC=10;AF=0.179;AN=56;BaseQRankSum=1.531;DP=425;FS=2.177;HRun=15;HaplotypeScore=67.5011;InbreedingCoeff=0.6070;MQ=59.53;MQ0=12;MQRankSum=0.272;QD=7.50;ReadPosRankSum=1.074;VQSLOD=-0.6739;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,19:24:44.50:504,45,0	0/0:2,0:3:6:0,6,78	0/1:33,0:12:16.51:17,0,111	0/1:38,0:13:18.96:20,0,19	0/0:15,0:14:27.55:0,28,419	0/0:20,0:21:51.01:0,51,714	0/0:4,0:3:3.01:0,3,37	1/1:15,16:29:40.15:438,40,0	0/0:14,0:14:36.10:0,36,584	0/0:15,0:14:33.03:0,33,414	0/0:10,0:9:21:0,21,298	0/0:11,0:11:24.08:0,24,421	0/0:7,0:8:15.03:0,15,243	0/0:6,0:7:15.05:0,15,263	0/0:7,0:7:9.01:0,9,133	1/1:4,10:13:10.16:252,10,0	0/0:24,0:26:53.80:0,54,794	0/0:28,0:28:49.26:0,49,444	0/0:18,0:13:27.06:0,27,402	0/0:10,0:10:14.91:0,15,169	0/0:4,0:4:6.02:0,6,110	0/0:6,0:6:8.98:0,9,100	0/0:5,0:7:11.93:0,12,122	0/0:7,0:6:12.04:0,12,204	0/0:17,0:18:45.02:0,45,560	0/0:17,0:18:29.99:0,30,424	0/0:12,0:12:33:0,33,442	1/1:4,3:6:5.70:67,6,0
chr10	97054869	.	T	TC	466.75	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-3.232;DP=243;FS=5.137;HRun=0;HaplotypeScore=63.7106;InbreedingCoeff=0.6147;MQ=58.52;MQ0=1;MQRankSum=4.121;QD=10.61;ReadPosRankSum=1.099;VQSLOD=3.3340;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:5.89:37,6,0	0/0:3,0:3:8.27:0,8,43	0/0:7,0:4:5.14:0,5,67	0/0:7,0:4:2.25:0,2,33	0/0:17,0:17:33.60:0,34,146	0/0:9,0:9:22.11:0,22,108	0/0:5,0:5:6.34:0,6,22	1/1:1,18:19:53.89:427,54,0	0/0:8,0:8:19.28:0,19,73	0/0:9,0:9:22.54:0,23,119	0/0:9,0:9:2.04:0,2,44	0/0:7,0:7:13.01:0,13,70	0/0:5,0:5:12.02:0,12,46	0/0:8,0:8:8.80:0,9,56	0/0:5,0:5:7.98:0,8,29	1/1:0,11:11:2.98:21,3,0	0/0:17,0:16:25:0,25,114	0/0:5,0:5:4.98:0,5,23	0/0:16,0:16:34.65:0,35,217	0/0:3,0:3:7.04:0,7,29	0/0:6,0:6:17.57:0,18,123	0/0:1,0:1:2.98:0,3,21	0/0:5,0:5:11.95:0,12,46	0/0:18,0:18:40.47:0,40,247	0/0:8,0:8:17.07:0,17,62	0/0:8,0:8:15.27:0,15,77	0/0:13,0:12:23.96:0,24,103	1/1:4,0:4:12.01:118,12,0
chr10	97055714	.	TGG	T	252.20	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.230;DP=433;FS=0.862;HRun=2;HaplotypeScore=86.9432;InbreedingCoeff=0.8269;MQ=59.02;MQ0=12;MQRankSum=0.191;QD=14.01;ReadPosRankSum=0.745;VQSLOD=0.8092;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:23.90:0,24,191	0/0:4,0:4:11.86:0,12,115	0/0:33,0:15:38.12:0,38,398	0/0:26,0:16:35.13:0,35,355	0/0:13,0:13:23.88:0,24,249	0/0:22,0:21:26.76:0,27,252	0/0:30,0:29:77.66:0,78,826	1/1:13,4:17:11.97:332,12,0	0/0:11,0:11:20.87:0,21,223	0/0:15,0:15:39.48:0,39,387	0/0:7,0:6:14.85:0,15,129	0/0:13,0:13:27.46:0,27,289	0/0:17,0:17:41.64:0,42,491	0/0:19,0:18:41.74:0,42,438	0/0:15,0:15:29.45:0,29,317	0/0:11,0:11:20.51:0,21,146	0/0:20,0:19:50.53:0,51,438	0/0:13,0:13:30.32:0,30,253	0/0:13,0:12:34.19:0,34,311	0/0:9,0:9:20.75:0,21,161	0/0:21,0:21:41.17:0,41,376	0/0:9,0:9:20.05:0,20,217	0/0:7,0:7:17.19:0,17,166	0/0:28,0:28:56.39:0,56,454	0/0:6,0:6:11.98:0,12,141	0/0:10,0:10:27.46:0,27,324	0/0:24,0:24:59.34:0,59,603	1/1:1,0:1:2.98:22,3,0
chr10	97056943	.	AT	A	1327.17	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.907;DP=543;FS=5.054;HRun=9;HaplotypeScore=64.7277;InbreedingCoeff=0.9066;MQ=77.70;MQ0=8;MQRankSum=0.057;QD=16.80;ReadPosRankSum=-0.796;VQSLOD=3.6258;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,34:39:69.03:630,69,0	0/0:3,0:3:9.03:0,9,104	0/0:38,2:23:31.11:0,31,325	0/0:45,0:26:27.44:0,27,287	0/0:20,0:20:57.17:0,57,652	0/0:17,0:17:51.13:0,51,576	0/0:13,0:13:30.09:0,30,346	1/1:5,25:30:75.01:682,75,0	0/0:7,0:7:18.05:0,18,208	0/0:19,0:19:54.16:0,54,620	0/0:18,0:19:47.97:0,48,533	0/0:9,0:9:24.53:0,25,268	0/0:7,0:7:18.05:0,18,204	0/0:15,0:15:42.12:0,42,484	0/0:15,0:15:27.08:0,27,312	1/1:0,6:6:15.01:137,15,0	0/0:44,0:43:99:0,113,1287	0/0:37,1:38:78.06:0,78,1110	0/0:27,0:27:71.98:0,72,777	0/0:27,0:27:75.66:0,76,846	0/0:5,0:5:12.04:0,12,138	0/0:4,0:4:12.02:0,12,129	0/0:10,0:10:30.09:0,30,346	0/0:15,0:15:42.12:0,42,484	0/0:22,0:22:57:0,57,637	0/0:28,0:28:78.15:0,78,873	0/0:15,0:15:39.12:0,39,450	1/1:2,1:3:3:27,3,0
chr10	97057442	.	GGT	G	451.71	PASS	AB=0.904;AC=15;AF=0.288;AN=52;BaseQRankSum=5.304;DP=695;FS=1.416;HRun=0;HaplotypeScore=110.8966;InbreedingCoeff=-0.3200;MQ=51.46;MQ0=36;MQRankSum=0.642;QD=1.41;ReadPosRankSum=1.076;VQSLOD=2.2678;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:12.42:0,12,46	0/0:9,0:9:15.04:0,15,203	./.	./.	0/0:14,0:14:6.02:0,6,86	0/1:22,2:24:34.76:35,0,209	0/1:18,1:18:14.56:15,0,197	0/0:33,0:30:2.98:0,3,21	0/0:24,0:24:0.44:0,0,353	0/1:25,0:24:4.13:4,0,222	0/0:14,0:15:21.07:0,21,310	0/1:19,5:25:42.85:43,0,152	0/0:27,2:27:3.46:0,3,407	0/1:14,6:21:52.07:64,0,52	0/0:26,1:26:33.04:0,33,465	0/0:19,0:19:2.40:0,2,9	0/0:23,0:23:2.95:0,3,368	1/1:12,0:23:16.94:84,17,0	0/1:19,2:19:45.84:46,0,54	0/1:14,2:16:35.15:35,0,316	0/1:21,0:33:15.32:15,0,141	0/1:22,2:22:8.54:9,0,283	0/1:14,1:15:65.21:65,0,185	0/0:29,3:31:0.42:0,0,375	0/1:19,4:22:46.02:46,0,280	0/1:23,3:23:78.57:79,0,283	0/1:18,2:20:55.85:56,0,177	0/0:10,0:9:6.89:0,7,65
chr10	97057449	.	G	GC	928.01	PASS	AB=0.670;AC=4;AF=0.071;AN=56;BaseQRankSum=7.127;DP=706;FS=2.631;HRun=0;HaplotypeScore=104.6315;InbreedingCoeff=-0.0771;MQ=50.91;MQ0=37;MQRankSum=-5.677;QD=8.14;ReadPosRankSum=-1.775;VQSLOD=3.4677;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:34,17:45:24.81:25,0,237	0/0:9,0:9:27.07:0,27,355	0/0:37,0:8:20.85:0,21,249	0/0:45,0:13:33.12:0,33,441	0/0:17,0:17:36.12:0,36,497	0/0:24,0:24:66.14:0,66,859	0/0:21,0:19:45.57:0,46,602	0/1:15,19:30:99:609,0,255	0/0:20,0:20:51.11:0,51,676	0/0:25,0:24:65.97:0,66,833	0/0:16,0:16:39.11:0,39,525	0/0:27,0:27:57.06:0,57,722	0/0:29,0:27:63.13:0,63,835	0/0:23,0:23:50.93:0,51,616	0/0:28,0:27:56.34:0,56,812	0/1:6,12:17:65.50:162,0,66	0/0:27,0:26:62.28:0,62,808	0/0:26,1:25:50.27:0,50,491	0/0:19,0:17:37.07:0,37,467	0/0:16,0:16:36.01:0,36,456	0/0:38,0:36:63.58:0,64,769	0/0:22,0:20:48.07:0,48,623	0/0:17,0:17:39:0,39,463	0/0:33,0:32:84.23:0,84,1140	0/0:23,0:22:54.07:0,54,701	0/0:26,0:23:66.01:0,66,825	0/0:22,0:22:57.15:0,57,661	0/1:5,4:10:59.73:242,0,60
chr10	97057455	.	G	GC	598.63	PASS	AB=0.687;AC=3;AF=0.054;AN=56;BaseQRankSum=6.762;DP=706;FS=0.000;HRun=0;HaplotypeScore=103.1276;InbreedingCoeff=-0.0574;MQ=50.68;MQ0=42;MQRankSum=-5.349;QD=9.50;ReadPosRankSum=-3.663;VQSLOD=2.4103;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,15:46:17.38:0,17,250	0/0:8,0:8:24.08:0,24,334	0/0:33,0:6:17.99:0,18,225	0/0:46,0:14:26.93:0,27,368	0/0:16,0:16:33.11:0,33,457	0/0:23,0:23:66.15:0,66,870	0/0:21,0:19:45.57:0,46,597	0/1:24,10:30:99:370,0,572	0/0:20,0:20:51.08:0,51,675	0/0:25,0:24:69.01:0,69,892	0/0:17,0:17:45.13:0,45,609	0/0:27,0:27:57.05:0,57,718	0/0:30,0:27:63.14:0,63,836	0/0:25,0:24:53.96:0,54,676	0/0:26,0:25:57.17:0,57,774	0/1:6,12:17:68.54:125,0,69	0/0:27,0:26:74.85:0,75,928	0/0:28,0:26:51.65:0,52,501	0/0:18,0:16:28.73:0,29,510	0/0:16,0:16:36.01:0,36,456	0/0:38,0:36:60.60:0,61,747	0/0:20,0:18:42.09:0,42,561	0/0:19,0:18:48.04:0,48,598	0/0:35,0:34:93.24:0,93,1250	0/0:23,0:22:54.07:0,54,701	0/0:25,1:23:69.06:0,69,875	0/0:22,0:22:58.57:0,59,665	0/1:6,5:10:99:204,0,101
chr10	97058712	.	CTG	C	3494.30	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.436;DP=616;FS=1.993;HRun=0;HaplotypeScore=79.6375;InbreedingCoeff=0.9996;MQ=87.25;MQ0=0;MQRankSum=-2.322;QD=35.30;ReadPosRankSum=-1.449;VQSLOD=5.5031;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:75.25:1061,75,0	0/0:13,0:13:39.12:0,39,685	0/0:23,0:23:51.09:0,51,952	0/0:32,0:30:70.80:0,71,1084	0/0:24,0:24:66.20:0,66,1137	0/0:25,0:25:69.24:0,69,1246	0/0:19,0:19:48.16:0,48,874	1/1:0,23:23:69.18:910,69,0	0/0:23,0:23:69.24:0,69,1231	0/0:25,0:25:72.23:0,72,1264	0/0:9,0:9:27.09:0,27,495	0/0:19,0:19:57.20:0,57,1029	0/0:17,0:17:48.16:0,48,854	0/0:26,0:26:69.22:0,69,1225	0/0:18,0:18:54.17:0,54,950	1/1:1,22:23:36.21:792,36,0	0/0:23,0:23:66.23:0,66,1180	0/0:15,0:15:41.74:0,42,688	0/0:23,0:23:63.20:0,63,1091	0/0:19,0:19:54.19:0,54,988	0/0:31,0:31:87.28:0,87,1541	0/0:15,0:15:45.15:0,45,818	0/0:13,0:13:39.13:0,39,704	0/0:22,0:22:66.23:0,66,1209	0/0:16,0:16:45.15:0,45,825	0/0:31,0:31:90.30:0,90,1605	0/0:36,0:36:99:0,108,1956	1/1:1,23:24:51.17:730,51,0
chr10	97059007	.	CGTGTGTGTGT	C	397.32	PASS	AB=0.683;AC=7;AF=0.130;AN=54;BaseQRankSum=6.826;DP=567;FS=1.970;HRun=0;HaplotypeScore=162.8357;InbreedingCoeff=0.4482;MQ=53.34;MQ0=11;MQRankSum=-4.675;QD=3.93;ReadPosRankSum=-3.673;VQSLOD=1.6395;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,20:32:21.66:204,22,0	0/0:11,0:11:18.53:0,19,790	0/0:18,0:2:3.01:0,3,76	./.	0/0:21,0:25:39.02:0,39,1095	0/0:9,0:9:15.04:0,15,400	0/0:16,0:17:25.33:0,25,637	0/1:15,0:26:8.75:9,0,92	0/0:14,0:14:27.07:0,27,718	0/0:16,0:17:33.87:0,34,1184	0/0:13,0:13:18.03:0,18,578	0/0:17,0:21:42.02:0,42,1110	0/0:33,0:33:64.03:0,64,1844	0/0:22,0:23:48.16:0,48,1862	0/0:13,0:13:15.05:0,15,546	0/1:5,6:11:8.17:152,0,8	0/0:32,0:34:74.97:0,75,2534	0/1:16,0:28:58.11:58,0,154	0/0:19,0:18:26.97:0,27,765	0/0:12,0:12:21.07:0,21,802	0/0:58,0:57:82.11:0,82,2550	0/0:8,0:7:12.04:0,12,485	0/0:12,0:12:14.83:0,15,449	0/0:36,0:40:87.26:0,87,3418	0/0:19,0:22:36.11:0,36,1110	0/0:18,0:18:29.98:0,30,642	0/0:10,0:11:21.07:0,21,669	1/1:2,0:4:5.88:106,6,0
chr10	97061296	.	TA	T	2143.91	PASS	AB=0.933;AC=10;AF=0.179;AN=56;BaseQRankSum=9.207;DP=551;FS=3.943;HRun=9;HaplotypeScore=68.3772;InbreedingCoeff=0.7590;MQ=68.90;MQ0=3;MQRankSum=-2.530;QD=15.65;ReadPosRankSum=0.069;VQSLOD=3.8960;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:33:71.95:649,72,0	0/0:7,0:7:18.05:0,18,208	0/1:11,2:11:20.84:21,0,102	0/1:16,0:9:12.31:12,0,92	0/0:21,0:21:57.17:0,57,656	0/0:17,0:18:45:0,45,499	0/0:22,0:22:57.17:0,57,658	1/1:7,31:38:89.98:807,90,0	0/0:16,0:16:39.11:0,39,449	0/0:20,0:20:54.16:0,54,617	0/0:19,1:20:23.68:0,24,516	0/0:23,0:22:57.14:0,57,638	0/0:18,0:18:39.10:0,39,441	0/0:17,0:17:51.14:0,51,580	0/0:31,0:31:75.20:0,75,848	1/1:3,24:27:69.03:631,69,0	0/0:29,0:29:63.18:0,63,774	0/0:13,0:13:30.09:0,30,346	0/0:16,0:16:45.11:0,45,500	0/0:15,0:15:42.10:0,42,473	0/0:18,0:18:39.10:0,39,439	0/0:7,0:7:21.06:0,21,242	0/0:17,0:17:36.08:0,36,403	0/0:23,0:23:66.02:0,66,732	0/0:25,0:25:66.20:0,66,762	0/0:18,0:18:48.13:0,48,546	0/0:20,0:20:48.13:0,48,544	1/1:3,7:10:20.99:192,21,0
chr10	97061316	.	CGT	C	792.45	PASS	AB=0.902;AC=21;AF=0.404;AN=52;BaseQRankSum=8.756;DP=597;FS=7.268;HRun=0;HaplotypeScore=90.1621;InbreedingCoeff=-0.1742;MQ=58.34;MQ0=13;MQRankSum=-2.118;QD=1.97;ReadPosRankSum=2.793;VQSLOD=0.6099;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:32:31.25:154,31,0	0/1:7,0:7:21.84:22,0,125	./.	./.	0/1:16,3:19:70.86:71,0,289	0/1:19,3:22:67.38:67,0,333	0/1:20,3:24:8.67:9,0,463	0/1:31,2:33:43.29:43,0,160	0/1:12,2:15:6.56:7,0,336	0/1:24,2:26:24.71:25,0,465	0/0:19,0:19:33.11:0,33,495	0/0:20,1:20:8.51:0,9,538	0/0:13,0:13:12.04:0,12,180	0/0:9,0:18:30.01:0,30,298	0/1:24,4:29:72.91:73,0,414	1/1:13,0:24:28.41:140,28,0	0/1:22,3:28:81.60:82,0,727	1/1:8,0:14:17.04:84,17,0	0/0:23,0:25:31.85:0,32,406	0/1:16,0:18:9.51:10,0,252	0/0:29,3:32:20.53:0,21,714	0/1:13,1:14:6.56:7,0,334	0/0:16,0:16:18.06:0,18,272	0/1:25,3:27:13.12:13,0,676	0/1:17,4:21:95.55:96,0,323	0/1:21,2:23:35.96:36,0,334	0/1:11,1:24:23.63:24,0,153	0/0:4,0:9:21.01:0,21,203
chr10	97062818	.	A	AG	887.89	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.690;DP=705;FS=0.771;HRun=4;HaplotypeScore=64.6603;InbreedingCoeff=0.9920;MQ=79.91;MQ0=0;MQRankSum=-1.628;QD=37.00;ReadPosRankSum=0.858;VQSLOD=3.7425;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,108,1215	0/0:14,0:14:39.11:0,39,442	0/0:21,0:21:51.11:0,51,555	0/0:25,0:25:69.15:0,69,742	0/0:31,0:31:93.27:0,93,1055	0/0:22,0:22:60.17:0,60,681	0/0:27,0:27:75.21:0,75,851	0/0:33,0:33:87.22:0,87,963	0/0:22,0:22:66.19:0,66,749	0/0:36,0:36:99:0,105,1189	0/0:21,0:21:54.08:0,54,587	0/0:30,0:30:84.24:0,84,953	0/0:23,0:23:69.20:0,69,782	0/0:24,0:24:72.19:0,72,805	0/0:31,0:31:87.22:0,87,967	0/0:23,0:23:63.18:0,63,715	0/0:36,0:36:99:0,105,1168	1/1:1,23:24:72.24:983,72,0	0/0:24,0:24:69.20:0,69,782	0/0:26,0:26:69.19:0,69,782	0/0:26,0:26:72.20:0,72,817	0/0:18,0:18:51.14:0,51,579	0/0:20,0:20:54.14:0,54,603	0/0:16,0:16:42.12:0,42,476	0/0:23,0:23:66.19:0,66,748	0/0:38,0:38:99:0,102,1156	0/0:23,0:23:66.17:0,66,739	0/0:6,0:6:18.05:0,18,204
chr10	97063061	.	C	CAGAT	1132.86	PASS	AB=0.839;AC=6;AF=0.120;AN=50;BaseQRankSum=-4.772;DP=772;FS=4.472;HRun=0;HaplotypeScore=115.3327;InbreedingCoeff=0.2512;MQ=63.21;MQ0=4;MQRankSum=-0.323;QD=8.58;ReadPosRankSum=-1.353;VQSLOD=2.3599;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,26:46:12.92:667,0,13	0/0:12,0:12:9.03:0,9,138	./.	./.	0/0:31,0:31:57.18:0,57,854	0/0:18,0:18:21.07:0,21,322	0/0:9,0:18:12.88:0,13,106	./.	0/1:28,0:28:6.79:7,0,556	0/0:37,0:37:48.15:0,48,717	0/0:28,0:28:36.12:0,36,552	0/0:20,0:20:24.08:0,24,368	0/0:28,0:28:45.14:0,45,670	0/0:28,0:28:39.11:0,39,575	0/0:19,0:20:27.08:0,27,396	0/1:15,8:24:57.93:128,0,58	0/0:29,0:30:48.14:0,48,698	1/1:9,8:18:18.06:420,18,0	0/0:20,0:20:21.07:0,21,322	0/0:36,0:36:57.18:0,57,852	0/0:24,0:24:27.09:0,27,414	0/0:23,0:23:36.12:0,36,552	0/0:28,0:28:39.13:0,39,598	0/0:21,0:21:27.01:0,27,362	0/0:30,0:30:57.17:0,57,834	0/0:32,0:33:42.14:0,42,626	0/0:31,0:31:45.15:0,45,690	0/1:16,0:16:33.47:33,0,441
chr10	97065255	.	ACACAAG	A	3067.39	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.772;DP=722;FS=1.160;HRun=0;HaplotypeScore=157.6294;InbreedingCoeff=0.9977;MQ=86.24;MQ0=1;MQRankSum=-10.935;QD=38.34;ReadPosRankSum=-3.397;VQSLOD=3.0798;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,22:31:42.14:959,42,0	0/0:15,0:15:42.14:0,42,1454	0/0:36,0:36:84.06:0,84,3021	0/0:23,0:23:60.21:0,60,1956	0/0:19,0:19:54.19:0,54,1834	0/0:16,0:16:48.16:0,48,1666	0/0:29,0:29:63.22:0,63,2121	1/1:9,14:23:42.14:918,42,0	0/0:26,0:26:75.26:0,75,2608	0/0:33,0:33:87.30:0,87,2926	0/0:19,0:19:54.18:0,54,1815	0/0:36,0:35:96.31:0,96,3229	0/0:26,0:26:66.23:0,66,2273	0/0:36,0:36:96.33:0,96,3327	0/0:22,0:22:63.22:0,63,2134	1/1:5,12:17:42.14:940,42,0	0/0:34,0:34:93.32:0,93,3197	0/0:23,0:23:48.16:0,48,1632	0/0:29,0:29:75.24:0,75,2512	0/0:20,0:20:54.19:0,54,1703	0/0:55,0:55:99:0,148,5111	0/0:25,0:25:66.23:0,66,2300	0/0:20,0:20:51.18:0,51,1771	0/0:44,0:44:99:0,129,4358	0/0:19,0:19:57.20:0,57,1928	0/0:20,0:20:60.20:0,60,2003	0/0:17,0:17:45.15:0,45,1559	1/1:2,7:9:18.06:411,18,0
chr10	97065293	.	G	GCACA	1904.38	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=10.301;DP=655;FS=3.943;HRun=0;HaplotypeScore=140.0615;InbreedingCoeff=0.5315;MQ=66.99;MQ0=1;MQRankSum=-6.106;QD=9.72;ReadPosRankSum=-0.040;VQSLOD=2.9513;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,6:32:23.21:411,23,0	0/0:10,0:10:30.06:0,30,534	0/0:20,0:19:54.02:0,54,833	0/0:25,0:17:42.04:0,42,676	0/0:22,0:22:63.22:0,63,1176	0/0:18,0:18:51.10:0,51,877	0/0:21,0:21:60.19:0,60,1080	1/1:22,0:23:24.88:260,25,0	0/0:20,0:20:57.18:0,57,1020	0/0:26,0:26:78.27:0,78,1475	0/0:21,0:21:54.02:0,54,943	0/0:27,0:27:74.82:0,75,1299	0/0:25,0:25:69.17:0,69,1114	0/0:33,0:33:93.32:0,93,1669	0/0:26,0:26:75.17:0,75,1259	1/1:8,12:22:30.09:671,30,0	0/0:36,0:36:98.08:0,98,1812	0/1:13,0:13:62.01:95,0,62	0/1:16,0:15:1.25:1,0,476	0/1:21,0:21:99:115,0,306	0/1:45,0:45:14.35:14,0,1191	0/0:28,0:28:68.80:0,69,1180	0/0:14,0:14:39.13:0,39,720	0/0:43,0:43:99:0,112,1959	0/0:19,0:19:51.17:0,51,953	0/0:24,0:24:69.13:0,69,1117	0/1:12,0:12:83.19:83,0,97	1/1:3,6:12:21.04:428,21,0
chr10	97065295	.	T	TCACA	3867.46	PASS	AB=0.607;AC=17;AF=0.304;AN=56;BaseQRankSum=3.027;DP=708;FS=2.200;HRun=0;HaplotypeScore=149.6302;InbreedingCoeff=0.8467;MQ=63.16;MQ0=2;MQRankSum=-4.448;QD=17.11;ReadPosRankSum=-1.781;VQSLOD=3.3755;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:17.99:326,18,0	0/0:12,0:12:21.04:0,21,289	0/0:22,0:18:2.18:0,2,75	0/0:22,0:15:2.98:0,3,22	0/0:24,0:24:45.12:0,45,671	0/0:20,0:20:39.08:0,39,523	0/0:23,0:23:45.11:0,45,669	1/1:26,0:26:26.98:310,27,0	0/0:18,0:21:42.13:0,42,628	0/0:26,0:29:54.63:0,55,786	0/0:20,0:23:11.14:0,11,458	0/0:25,0:28:48.12:0,48,680	0/0:24,0:25:45.13:0,45,671	0/0:35,0:35:48.14:0,48,743	0/0:20,0:26:38.56:0,39,630	1/1:21,0:21:33.06:688,33,0	0/0:33,0:37:74.96:0,75,1081	0/1:6,0:17:20.80:335,0,21	1/1:13,7:20:27.92:470,28,0	1/1:12,10:26:20.73:444,21,0	1/1:35,14:53:16.50:438,16,0	0/0:27,0:28:32.12:0,32,694	0/0:17,0:17:26.73:0,27,408	0/0:42,0:44:69.68:0,70,1055	0/0:18,0:20:36.02:0,36,554	0/0:22,0:24:38.51:0,39,683	1/1:8,9:16:18.06:427,18,0	1/1:12,0:12:21.03:430,21,0
chr10	97068715	.	AAAAC	A	1142.29	PASS	AB=0.951;AC=8;AF=0.143;AN=56;BaseQRankSum=9.114;DP=728;FS=3.069;HRun=0;HaplotypeScore=114.9798;InbreedingCoeff=0.7016;MQ=68.73;MQ0=2;MQRankSum=0.645;QD=8.72;ReadPosRankSum=-1.573;VQSLOD=2.7618;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:36,2:38:23.35:23,0,1441	0/0:12,0:12:30.09:0,30,672	0/0:17,0:17:12.03:0,12,197	0/0:29,0:27:27.08:0,27,510	0/0:30,0:30:75.26:0,75,1732	0/0:24,0:24:51.17:0,51,1140	0/0:28,0:28:54.19:0,54,1253	1/1:14,19:33:57.11:751,57,0	0/0:26,0:26:60.21:0,60,1390	0/0:33,0:33:60.21:0,60,1365	0/0:26,0:26:63.22:0,63,1428	0/0:26,0:25:48.16:0,48,1147	0/0:30,0:30:78.27:0,78,1762	0/0:23,0:23:54.18:0,54,1205	0/0:21,0:21:39.12:0,39,869	0/1:19,1:20:14.68:15,0,606	0/0:23,0:23:42.12:0,42,921	1/1:12,0:28:24:220,24,0	0/0:22,0:21:24.05:0,24,709	0/0:30,0:30:75.24:0,75,1672	0/0:20,0:20:42.14:0,42,955	0/0:25,0:25:51.18:0,51,1194	0/0:28,0:28:57.18:0,57,1259	0/0:24,0:24:54.17:0,54,1155	0/0:36,0:36:57.20:0,57,1298	0/0:26,0:26:66.23:0,66,1466	0/0:38,0:38:75.26:0,75,1713	1/1:4,8:12:18.06:287,18,0
chr10	97070573	.	ATTCT	A	983.68	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.279;DP=633;FS=3.061;HRun=0;HaplotypeScore=105.2322;InbreedingCoeff=0.9993;MQ=71.43;MQ0=0;MQRankSum=-0.484;QD=39.35;ReadPosRankSum=2.187;VQSLOD=3.8782;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:87.77:0,88,2112	0/0:14,0:14:42.14:0,42,1090	0/0:16,0:14:33.11:0,33,783	0/0:24,0:24:53.53:0,54,1143	0/0:30,0:30:90.31:0,90,2264	0/0:20,0:20:60.21:0,60,1400	0/0:23,0:23:69.24:0,69,1715	0/0:34,0:34:93.32:0,93,2319	0/0:17,0:17:51.18:0,51,1324	0/0:24,0:24:72.25:0,72,1871	0/0:18,0:18:48.16:0,48,1197	0/0:22,0:22:63.20:0,63,1583	0/0:20,0:20:60.21:0,60,1516	0/0:24,0:24:72.25:0,72,1836	0/0:27,0:27:72.25:0,72,1813	0/0:15,0:15:42.14:0,42,1089	0/0:31,0:31:90.31:0,90,2301	1/1:2,23:25:60.21:1079,60,0	0/0:20,0:20:51.17:0,51,1223	0/0:29,0:29:81.28:0,81,2055	0/0:20,0:20:57.20:0,57,1451	0/0:11,0:11:33.11:0,33,830	0/0:19,0:19:57.20:0,57,1480	0/0:13,0:13:39.13:0,39,980	0/0:28,0:28:78.27:0,78,1994	0/0:27,0:27:78.27:0,78,1979	0/0:26,0:25:69.24:0,69,1776	0/0:19,0:19:54.19:0,54,1360
chr10	97070609	.	AT	A	1516.89	PASS	AB=0.936;AC=12;AF=0.214;AN=56;BaseQRankSum=8.453;DP=657;FS=0.000;HRun=11;HaplotypeScore=74.2003;InbreedingCoeff=0.6246;MQ=67.64;MQ0=1;MQRankSum=-1.977;QD=9.19;ReadPosRankSum=-0.326;VQSLOD=2.5048;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,24:33:40.44:470,40,0	0/0:14,1:15:17.39:0,17,376	0/1:20,1:14:19.55:20,0,132	0/1:21,0:18:4.65:5,0,146	0/0:34,0:38:99:0,102,1021	0/0:21,0:21:35.48:0,35,563	0/0:21,0:21:51.13:0,51,544	1/1:10,16:26:47.46:376,47,0	0/0:20,0:20:54.14:0,54,576	0/0:30,0:30:85.45:0,85,889	0/1:15,1:17:2.71:3,0,309	0/0:25,0:25:48.09:0,48,634	0/0:26,0:26:73.98:0,74,764	0/0:23,0:23:60.15:0,60,640	0/0:22,0:22:55.93:0,56,563	1/1:0,17:17:47.95:394,48,0	0/0:41,0:41:99:0,117,1239	0/0:26,0:26:73.03:0,73,758	0/0:20,0:19:44.95:0,45,462	0/0:25,1:27:47.37:0,47,693	0/0:14,0:14:21.05:0,21,224	0/0:12,1:13:27.07:0,27,288	0/0:20,0:20:48.12:0,48,512	0/1:9,2:11:25.28:25,0,155	0/0:32,3:35:46.92:0,47,890	0/0:27,0:27:72.17:0,72,756	0/0:27,1:28:47.53:0,48,704	1/1:1,18:19:30.66:395,31,0
chr10	97071497	.	CATAG	C	599.81	PASS	AB=0.974;AC=13;AF=0.283;AN=46;BaseQRankSum=-1.337;DP=701;FS=24.219;HRun=0;HaplotypeScore=137.0099;InbreedingCoeff=0.0291;MQ=71.55;MQ0=13;MQRankSum=1.024;QD=2.60;ReadPosRankSum=1.809;VQSLOD=0.5163;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:44:20.57:0,21,169	0/0:13,0:13:21.07:0,21,411	./.	./.	0/0:26,0:26:30.07:0,30,488	0/1:27,0:27:99:100,0,296	./.	./.	0/0:22,0:19:5.99:0,6,50	0/1:17,1:18:26.03:26,0,189	0/1:16,1:17:26.97:27,0,269	0/0:27,0:27:30.09:0,30,489	0/1:28,0:28:11.62:12,0,182	0/0:28,0:28:6.01:0,6,79	0/0:35,0:35:15:0,15,207	0/0:28,0:27:17.76:0,18,132	0/0:29,0:28:33.10:0,33,642	0/0:25,0:23:20.88:0,21,183	0/1:16,2:18:10.70:81,0,11	1/1:14,1:15:15.04:204,15,0	1/1:12,3:12:9.03:135,9,0	0/1:19,0:19:10.34:10,0,310	0/1:26,0:25:17.45:17,0,222	0/0:46,0:46:18.03:0,18,249	0/1:15,0:13:59.31:131,0,59	0/1:32,1:32:1.03:1,0,536	./.	0/0:12,0:12:11.95:0,12,152
chr10	97071555	.	T	TAGAG	1698.28	PASS	AB=0.982;AC=10;AF=0.200;AN=50;BaseQRankSum=5.437;DP=754;FS=25.080;HRun=0;HaplotypeScore=155.0803;InbreedingCoeff=0.4562;MQ=49.98;MQ0=36;MQRankSum=-0.326;QD=8.66;ReadPosRankSum=0.026;VQSLOD=0.9209;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:37:37.78:0,38,275	0/0:22,0:22:59.84:0,60,705	./.	./.	0/0:38,0:35:83.96:0,84,893	0/1:29,0:29:64.34:64,0,539	0/0:17,0:13:20.98:0,21,175	0/0:45,0:20:20.53:0,21,136	0/0:30,0:26:48.04:0,48,380	0/0:32,0:29:33.88:0,34,706	0/0:25,0:24:11.96:0,12,550	0/0:32,0:32:83.94:0,84,924	0/0:36,0:35:42.65:0,43,593	0/0:29,0:29:68.94:0,69,604	0/0:33,0:30:65.66:0,66,627	0/0:24,0:20:35.27:0,35,282	0/1:27,0:23:46.59:47,0,543	0/0:20,0:16:2.30:0,2,132	1/1:22,0:16:25.22:245,25,0	1/1:35,0:32:80.92:747,81,0	1/1:15,1:11:24:256,24,0	0/0:27,0:27:31.61:0,32,634	0/0:26,0:24:12.50:0,12,421	0/0:31,0:31:43.83:0,44,460	0/1:24,2:23:99:112,0,178	0/1:41,0:35:99:383,0,454	./.	0/0:17,0:16:41.79:0,42,329
chr10	97071559	.	TAGAG	T	842.29	PASS	AB=0.990;AC=11;AF=0.212;AN=52;BaseQRankSum=5.279;DP=768;FS=2.205;HRun=0;HaplotypeScore=161.7248;InbreedingCoeff=0.0933;MQ=50.27;MQ0=33;MQRankSum=-2.593;QD=3.37;ReadPosRankSum=-6.720;VQSLOD=-0.2308;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:37:29.86:0,30,373	0/0:22,0:22:60.02:0,60,702	./.	./.	0/0:37,0:34:56.72:0,57,677	0/1:29,0:29:99:225,0,420	0/0:17,0:13:23.98:0,24,203	1/1:45,0:22:35.56:237,36,0	0/0:23,6:25:44.28:0,44,400	0/0:33,0:31:65.79:0,66,765	0/0:26,0:25:39.86:0,40,561	0/0:34,0:34:60.97:0,61,705	0/1:36,0:35:13.76:14,0,411	0/0:30,0:30:50.39:0,50,616	0/0:35,0:32:66.46:0,66,587	0/0:25,0:21:42.02:0,42,422	0/0:27,0:23:24.16:0,24,683	0/0:23,0:19:23.27:0,23,290	0/1:21,0:17:13.31:13,0,189	0/0:38,0:35:4.77:0,5,542	0/1:16,0:11:30.30:30,0,138	0/0:28,0:28:12.59:0,13,534	0/1:24,2:24:8.50:9,0,364	0/1:31,0:30:23.57:24,0,266	1/1:26,3:26:0.53:214,1,0	0/0:43,0:37:83.02:0,83,1112	0/0:29,0:27:5.82:0,6,48	0/1:17,0:16:99:222,0,118
chr10	97071591	.	T	TAG	608.97	PASS	AB=0.971;AC=4;AF=0.071;AN=56;BaseQRankSum=6.539;DP=836;FS=1.557;HRun=0;HaplotypeScore=145.9934;InbreedingCoeff=0.4647;MQ=73.26;MQ0=19;MQRankSum=0.746;QD=4.54;ReadPosRankSum=-2.181;VQSLOD=2.7058;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:25:27.30:0,27,464	0/0:20,0:20:51:0,51,698	0/1:32,0:28:54.40:54,0,118	0/1:60,0:37:6.11:6,0,466	0/0:29,0:28:69.21:0,69,928	0/0:26,0:26:63.02:0,63,847	0/0:18,0:16:39.13:0,39,535	0/0:42,0:38:99:0,104,1138	0/0:31,0:28:66.16:0,66,876	0/0:35,0:34:96.23:0,96,1290	0/0:24,0:23:57.19:0,57,782	0/0:31,0:31:87.26:0,87,1146	0/0:30,0:29:66.20:0,66,886	0/0:34,0:34:84.12:0,84,1151	0/0:38,0:36:87.14:0,87,1177	0/0:25,0:21:48.16:0,48,659	0/0:26,0:23:36.22:0,36,474	0/0:19,0:15:6.90:0,7,72	0/0:21,0:19:44.06:0,44,574	0/0:48,1:46:99:0,120,1644	0/0:13,0:12:30.10:0,30,411	0/0:32,0:32:81.27:0,81,1110	0/0:26,0:25:66.22:0,66,904	0/0:21,0:21:35.71:0,36,477	1/1:9,22:31:39.12:659,39,0	0/0:38,0:35:75.29:0,75,1040	0/0:25,0:25:27.02:0,27,348	0/0:20,0:19:48.15:0,48,658
chr10	97071603	.	GATAGAGA	G	578.40	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=3.418;DP=806;FS=2.273;HRun=0;HaplotypeScore=213.4709;InbreedingCoeff=0.6648;MQ=81.35;MQ0=11;MQRankSum=-5.026;QD=3.64;ReadPosRankSum=0.526;VQSLOD=2.4365;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:21.23:0,21,175	0/0:18,0:18:48.16:0,48,1512	0/1:56,0:41:7.15:7,0,614	0/0:73,0:44:86.58:0,87,1405	0/0:25,0:24:72.24:0,72,2065	0/0:26,0:26:69.24:0,69,1913	0/0:16,0:16:42.10:0,42,1017	1/1:40,0:38:6.36:296,6,0	0/0:26,0:25:57.16:0,57,1687	0/0:36,0:36:87.29:0,87,2423	0/0:20,0:19:42.14:0,42,1197	0/0:28,0:28:81.28:0,81,2350	0/0:25,0:25:63.21:0,63,1652	0/0:33,0:33:87.30:0,87,2318	0/0:32,0:31:84.29:0,84,2752	0/1:28,0:24:10.03:10,0,244	0/0:20,0:18:45.15:0,45,1380	1/1:3,12:14:6.02:123,6,0	0/0:17,0:16:42.14:0,42,1147	0/0:47,0:47:99:0,132,3738	0/0:15,0:15:42.14:0,42,1197	0/0:34,0:34:96.33:0,96,2500	0/0:23,0:23:66.22:0,66,2061	0/0:21,0:21:36.91:0,37,1056	0/0:31,0:31:40.03:0,40,392	0/0:32,0:30:84.22:0,84,2343	0/0:23,0:23:30.10:0,30,910	1/1:19,0:18:34.28:279,34,0
chr10	97071610	.	A	AG	3739.43	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-7.470;DP=775;FS=0.428;HRun=1;HaplotypeScore=114.9453;InbreedingCoeff=0.9751;MQ=84.77;MQ0=11;MQRankSum=-3.552;QD=31.16;ReadPosRankSum=1.938;VQSLOD=3.4340;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:26:44.39:650,44,0	0/0:17,0:17:48.16:0,48,671	0/0:61,0:45:44.30:0,44,778	0/0:77,0:48:79.83:0,80,871	0/0:26,0:26:75.24:0,75,1031	0/0:25,0:25:72.24:0,72,1007	0/0:17,0:17:51.05:0,51,666	1/1:1,28:29:84.29:1328,84,0	0/0:23,1:23:60.17:0,60,816	0/0:29,0:29:87.29:0,87,1217	0/0:16,0:16:45.15:0,45,628	0/0:27,0:27:81.27:0,81,1132	0/0:22,0:22:66.22:0,66,923	0/0:31,0:31:90.30:0,90,1256	0/0:29,1:29:84.28:0,84,1175	1/1:1,26:24:50.79:815,51,0	0/0:18,2:18:50.60:0,51,709	1/1:13,1:13:6.02:84,6,0	0/0:17,0:16:42.14:0,42,587	0/0:48,0:48:99:0,144,1988	0/0:17,0:17:48.16:0,48,665	0/0:32,0:32:96.32:0,96,1343	0/0:22,0:22:66.21:0,66,907	0/0:19,0:20:36.11:0,36,504	0/0:25,0:25:45.15:0,45,628	0/0:31,0:30:90.30:0,90,1254	0/0:20,0:20:33.11:0,33,459	1/1:0,22:21:54.18:863,54,0
chr10	97071888	.	C	CG	1829.46	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.993;DP=774;FS=2.682;HRun=1;HaplotypeScore=74.2345;InbreedingCoeff=0.9995;MQ=90.39;MQ0=0;MQRankSum=-1.736;QD=36.59;ReadPosRankSum=-1.161;VQSLOD=3.4640;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,1672	0/0:10,0:10:27.08:0,27,350	0/0:27,0:27:74.38:0,74,883	0/0:36,0:36:93.13:0,93,1112	0/0:29,0:29:84.10:0,84,1064	0/0:31,0:31:87.26:0,87,1099	0/0:38,0:38:99:0,108,1393	1/1:2,27:29:78.15:1098,78,0	0/0:26,0:26:78.21:0,78,989	0/0:36,0:36:99:0,99,1273	0/0:24,0:24:69.22:0,69,895	0/0:24,0:24:66.13:0,66,831	0/0:32,0:32:96.26:0,96,1214	0/0:28,0:28:84.23:0,84,1053	0/0:31,0:31:84.24:0,84,1071	0/0:28,0:28:81.23:0,81,1032	0/0:20,0:20:54.04:0,54,676	0/0:19,0:19:57.17:0,57,721	0/0:27,0:27:68.43:0,68,850	0/0:30,0:30:84.25:0,84,1070	0/0:20,0:20:57.19:0,57,738	0/0:31,0:31:90.27:0,90,1140	0/0:31,0:31:84.26:0,84,1071	0/0:33,0:33:99:0,99,1245	0/0:17,0:17:42.10:0,42,514	0/0:27,0:27:78.24:0,78,986	0/0:24,0:24:69.22:0,69,892	1/1:0,21:20:57.19:853,57,0
chr10	97076350	.	ATGTGTGTGTGTGTGTGTG	A	771.19	PASS	AB=0.833;AC=5;AF=0.093;AN=54;BaseQRankSum=3.865;DP=569;FS=8.370;HRun=0;HaplotypeScore=229.2232;InbreedingCoeff=0.5058;MQ=67.12;MQ0=10;MQRankSum=-2.452;QD=11.51;ReadPosRankSum=1.429;VQSLOD=1.5792;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,5:31:5.37:153,5,0	0/0:14,0:16:19.62:0,20,937	./.	0/0:37,0:24:2.49:0,2,10	0/0:15,0:15:12.04:0,12,645	0/0:18,0:20:24.08:0,24,1349	0/0:23,0:23:30.10:0,30,1846	0/0:32,0:31:23.26:0,23,850	0/0:17,0:17:15.05:0,15,790	0/0:19,0:19:27.14:0,27,988	0/0:10,0:10:6.02:0,6,227	0/0:13,0:15:15.52:0,16,903	0/0:13,0:13:15.05:0,15,1066	0/0:20,0:20:15.52:0,16,933	0/0:25,0:27:33.05:0,33,1849	1/1:17,1:21:11.62:461,12,0	0/0:29,0:27:42.14:0,42,2542	0/1:12,1:15:94.27:270,0,94	0/0:22,0:21:27.71:0,28,565	0/0:31,0:31:39.13:0,39,2090	0/0:23,0:23:15.05:0,15,1053	0/0:9,0:9:12.04:0,12,596	0/0:13,0:12:6.49:0,6,366	0/0:27,0:27:36.12:0,36,2265	0/0:23,0:22:24.08:0,24,1772	0/0:17,0:17:32.32:0,32,1689	0/0:12,0:12:9.03:0,9,522	0/0:7,0:6:3.01:0,3,167
chr10	97082122	.	TTG	T	155.46	PASS	AB=0.976;AC=22;AF=0.458;AN=48;BaseQRankSum=2.709;DP=619;FS=0.000;HRun=0;HaplotypeScore=83.0152;InbreedingCoeff=0.1900;MQ=59.90;MQ0=17;MQRankSum=0.246;QD=0.47;ReadPosRankSum=0.321;VQSLOD=1.5344;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:28:0:0,0,0	1/1:6,0:8:2.84:14,3,0	./.	0/1:25,0:12:0:0,0,0	1/1:22,0:21:2.84:14,3,0	0/1:20,0:18:14.28:14,0,48	0/1:34,0:34:8.50:8,0,156	./.	1/1:15,4:19:6.01:63,6,0	0/0:25,0:24:2.04:0,2,6	0/0:17,0:16:4.81:0,5,29	1/1:15,3:17:6.01:63,6,0	./.	1/1:18,0:18:3.01:31,3,0	0/1:17,4:21:23.31:23,0,42	1/1:20,0:25:4.06:17,4,0	0/0:25,0:25:12.84:0,13,102	0/1:22,0:20:0.01:0,0,240	./.	0/0:22,0:21:5.21:0,5,31	0/0:36,0:34:14.58:0,15,97	0/0:21,0:20:14.91:0,15,171	0/0:19,0:19:3.01:0,3,41	0/1:24,0:23:14.48:14,0,79	0/0:23,0:23:12.04:0,12,171	0/0:27,0:26:0:0,0,0	0/1:28,1:27:16.13:16,0,131	1/1:12,0:12:2.74:12,3,0
chr10	97086659	.	AGCAGGCAG	A	804.71	PASS	AB=1.000;AC=5;AF=0.096;AN=52;BaseQRankSum=5.488;DP=560;FS=6.052;HRun=0;HaplotypeScore=133.4888;InbreedingCoeff=0.5004;MQ=65.29;MQ0=11;MQRankSum=-4.670;QD=12.98;ReadPosRankSum=0.901;VQSLOD=1.6310;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,4:19:15.05:351,15,0	0/0:6,0:6:2.99:0,3,23	0/0:27,0:21:3.99:0,4,15	0/0:22,0:17:6.46:0,6,129	0/0:4,0:4:3:0,3,25	0/0:12,0:12:17.80:0,18,535	0/0:36,0:35:51.13:0,51,1831	./.	0/0:28,0:27:30.10:0,30,1200	0/0:14,0:14:23.44:0,23,711	0/0:4,0:4:6.01:0,6,150	0/0:47,0:47:69.21:0,69,2367	0/0:20,0:20:24.08:0,24,879	0/0:35,0:35:36.57:0,37,1235	0/0:18,0:18:21.05:0,21,738	1/1:8,6:14:24.05:558,24,0	0/0:37,0:37:50.38:0,50,1909	0/1:26,0:24:18.24:18,0,424	0/0:16,0:10:15.04:0,15,440	./.	0/0:54,0:49:39.29:0,39,1453	0/0:6,0:6:9.03:0,9,357	0/0:5,0:5:15.05:0,15,584	0/0:52,0:52:72.23:0,72,2695	0/0:10,0:10:9.03:0,9,316	0/0:12,0:12:14.36:0,14,305	0/0:18,0:18:26.08:0,26,757	0/0:4,0:4:3:0,3,25
chr10	97086800	.	GGCAGGCAGGAAGAAGGCA	G	889.63	PASS	AB=0.818;AC=7;AF=0.130;AN=54;BaseQRankSum=5.831;DP=437;FS=5.602;HRun=0;HaplotypeScore=185.0374;InbreedingCoeff=0.5758;MQ=54.34;MQ0=11;MQRankSum=-5.498;QD=20.69;ReadPosRankSum=0.201;VQSLOD=2.1765;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,11:12:3.01:151,3,0	0/0:2,0:2:6.02:0,6,348	0/0:21,0:12:35.15:0,35,944	0/0:16,0:15:39.11:0,39,890	0/0:8,0:8:15.52:0,16,718	0/0:11,0:11:21.07:0,21,926	0/0:46,0:44:99:0,120,5872	1/1:1,0:1:2.68:11,3,0	0/0:20,0:19:45.15:0,45,2213	0/0:13,0:12:23.97:0,24,826	0/0:2,0:2:3.01:0,3,90	0/0:33,0:32:84.27:0,84,3805	0/0:15,0:15:39.13:0,39,2204	0/0:21,0:21:54.18:0,54,2594	0/0:16,0:16:48.16:0,48,2613	0/1:7,2:9:99:545,0,111	0/0:31,0:30:87.30:0,87,5176	1/1:15,2:14:16.49:305,16,0	0/0:11,0:9:18.03:0,18,343	0/0:5,0:4:9.03:0,9,337	0/0:35,0:31:84.74:0,85,3625	0/0:12,0:11:21.54:0,22,809	0/0:4,0:4:6.02:0,6,171	0/0:45,0:44:99:0,120,7544	0/0:8,0:7:15.05:0,15,546	0/0:10,0:10:27.09:0,27,894	0/0:8,0:8:21.07:0,21,933	./.
chr10	97086818	.	A	AGCAGGCAG	1230.02	PASS	AB=0.763;AC=10;AF=0.185;AN=54;BaseQRankSum=0.537;DP=497;FS=20.944;HRun=0;HaplotypeScore=129.0209;InbreedingCoeff=0.5340;MQ=57.38;MQ0=2;MQRankSum=-5.723;QD=21.96;ReadPosRankSum=-1.750;VQSLOD=0.9406;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:15:3.01:87,3,0	0/0:3,0:3:3.01:0,3,78	0/0:20,0:12:12.51:0,13,308	0/0:21,0:19:27.08:0,27,583	0/0:9,0:9:15.05:0,15,387	0/1:8,0:9:32.83:33,0,207	0/0:46,0:45:94.23:0,94,2106	1/1:1,0:4:12.03:163,12,0	0/0:22,0:22:57.18:0,57,1269	0/0:13,0:13:27.09:0,27,673	0/0:3,0:3:6.02:0,6,116	0/0:37,0:37:72.16:0,72,1704	0/0:22,0:22:49.97:0,50,1137	0/0:31,0:31:87.30:0,87,2133	0/0:22,0:22:63.21:0,63,1502	0/1:4,5:9:89.55:730,0,90	0/0:34,0:34:78.27:0,78,1860	1/1:2,11:15:12.04:340,12,0	0/0:9,0:9:15.05:0,15,288	0/0:6,0:6:6.02:0,6,155	0/0:45,0:45:87.25:0,87,2036	0/0:9,0:8:9.03:0,9,233	./.	0/0:54,0:53:99:0,120,2782	0/0:8,0:8:9.03:0,9,233	0/0:12,0:12:15.32:0,15,443	0/0:12,0:12:33.11:0,33,758	1/1:1,0:1:2.98:21,3,0
chr10	97087155	.	TCCTAGCTGCCCA	T	3969.75	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.481;DP=657;FS=7.953;HRun=0;HaplotypeScore=218.2979;InbreedingCoeff=0.9983;MQ=89.54;MQ0=0;MQRankSum=-9.884;QD=101.79;ReadPosRankSum=1.682;VQSLOD=2.5230;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:69.24:2544,69,0	0/0:8,0:8:24.08:0,24,1349	0/0:26,0:26:78.26:0,78,3923	0/0:26,0:26:72.25:0,72,3774	0/0:25,0:25:60.21:0,60,3592	0/0:22,0:22:66.23:0,66,4140	0/0:25,0:25:75.26:0,75,4362	0/0:28,0:28:81.28:0,81,4727	0/0:26,0:26:78.25:0,78,4736	0/0:32,0:32:96.32:0,96,5273	0/0:12,0:12:36.12:0,36,2232	0/0:32,0:32:96.33:0,96,5744	0/0:34,0:34:99:0,102,6388	0/0:27,0:27:81.28:0,81,4803	0/0:31,0:31:93.32:0,93,5052	1/1:0,14:14:36.12:1425,36,0	0/0:26,0:26:75.19:0,75,4567	0/0:20,0:20:57.20:0,57,3621	0/0:17,0:17:51.18:0,51,3220	0/0:21,0:21:63.22:0,63,3837	0/0:29,0:29:87.30:0,87,4966	0/0:19,0:19:54.19:0,54,3385	0/0:17,0:17:48.16:0,48,2778	0/0:43,0:43:99:0,129,7858	0/0:20,0:20:60.17:0,60,3590	0/0:18,0:18:54.19:0,54,3140	0/0:25,0:25:75.26:0,75,4765	0/0:9,0:9:27.09:0,27,1602
chr10	97089102	.	CA	C	467.94	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.500;DP=474;FS=5.682;HRun=1;HaplotypeScore=57.1058;InbreedingCoeff=0.9842;MQ=86.28;MQ0=0;MQRankSum=-7.687;QD=14.62;ReadPosRankSum=-2.474;VQSLOD=2.0973;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.32:0,93,1487	0/0:10,0:10:30.10:0,30,480	0/0:18,0:18:51.13:0,51,750	0/0:15,0:15:33.19:0,33,657	0/0:15,0:15:45.15:0,45,708	0/0:19,0:19:57.19:0,57,907	0/0:19,0:19:57.19:0,57,911	1/1:0,23:24:70.67:448,71,0	0/0:14,0:14:42.14:0,42,669	0/0:16,0:16:48.16:0,48,759	0/0:11,0:11:30.09:0,30,457	0/0:22,0:22:66.23:0,66,1053	0/0:24,0:24:72.23:0,72,1121	0/0:18,0:18:54.18:0,54,863	0/0:27,0:27:81.27:0,81,1269	0/0:17,0:17:51.17:0,51,808	0/0:27,0:27:81.26:0,81,1267	0/0:19,0:19:57.15:0,57,876	0/0:18,0:18:54.18:0,54,863	0/0:7,0:7:21.07:0,21,336	0/0:17,0:17:48.16:0,48,767	0/0:8,0:8:19.96:0,20,312	0/0:5,0:5:15.05:0,15,236	0/0:13,0:13:39.13:0,39,624	0/0:14,0:14:42.14:0,42,672	0/0:15,0:15:45.15:0,45,718	0/0:23,0:23:69.22:0,69,1079	1/1:1,6:7:20.77:140,21,0
chr10	97089104	.	GACCCAGGT	G	1842.35	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.261;DP=472;FS=7.177;HRun=0;HaplotypeScore=122.4872;InbreedingCoeff=0.9866;MQ=85.63;MQ0=0;MQRankSum=-7.887;QD=57.57;ReadPosRankSum=-2.143;VQSLOD=2.9265;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.32:0,93,4129	0/0:10,0:10:30.10:0,30,1186	0/0:17,0:17:48.14:0,48,1934	0/0:15,0:15:45.12:0,45,1837	0/0:15,0:15:45.15:0,45,2050	0/0:19,0:19:54.17:0,54,2302	0/0:19,0:19:57.20:0,57,2435	1/1:2,23:24:70.77:1520,71,0	0/0:15,0:15:45.15:0,45,2035	0/0:16,0:16:48.16:0,48,2201	0/0:10,0:10:30.10:0,30,1244	0/0:22,0:22:66.23:0,66,2830	0/0:23,0:23:69.20:0,69,3051	0/0:18,0:18:54.19:0,54,2321	0/0:26,0:26:78.26:0,78,3433	0/0:17,0:17:51.18:0,51,2340	0/0:27,0:27:81.28:0,81,3620	0/0:19,0:19:57.20:0,57,2495	0/0:18,0:18:54.19:0,54,2325	0/0:9,0:9:27.09:0,27,1195	0/0:17,0:17:51.18:0,51,2293	0/0:8,0:8:21.07:0,21,973	0/0:5,0:5:15.04:0,15,553	0/0:13,0:13:39.13:0,39,1718	0/0:14,0:14:42.14:0,42,1840	0/0:15,0:15:45.15:0,45,2068	0/0:22,0:22:66.23:0,66,2969	1/1:1,6:7:21.07:443,21,0
chr10	97090001	.	A	AAT	3981.95	PASS	AB=0.757;AC=10;AF=0.179;AN=56;BaseQRankSum=-12.143;DP=502;FS=20.018;HRun=0;HaplotypeScore=62.1861;InbreedingCoeff=0.7918;MQ=75.69;MQ0=1;MQRankSum=0.600;QD=31.60;ReadPosRankSum=1.998;VQSLOD=3.7603;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,39:43:90.30:1492,90,0	0/0:3,0:3:8.76:0,9,82	0/0:18,0:17:39.47:0,39,419	0/1:13,0:10:28.01:28,0,171	0/0:11,0:11:33.09:0,33,438	0/0:12,0:12:36.10:0,36,494	0/0:18,0:18:54.13:0,54,714	1/1:1,26:29:84.13:1179,84,0	0/0:28,0:28:84.22:0,84,1122	0/0:16,0:16:47.74:0,48,559	0/0:7,0:7:21.03:0,21,259	0/0:19,0:19:56.87:0,57,641	0/0:27,0:27:78.17:0,78,1018	0/0:21,0:21:63.13:0,63,750	0/0:20,0:19:54.14:0,54,701	0/1:1,16:19:0.57:589,0,1	0/0:25,0:24:71.95:0,72,948	1/1:1,17:18:31.72:545,32,0	0/0:16,0:16:47.11:0,47,552	0/0:8,0:8:24.06:0,24,293	0/0:16,0:16:47.86:0,48,585	0/0:12,0:12:36.09:0,36,475	0/0:11,0:11:33.11:0,33,469	0/0:27,0:27:72.21:0,72,989	0/0:15,0:15:42.13:0,42,568	0/0:29,0:29:87.11:0,87,1106	0/0:17,0:17:50.88:0,51,652	1/1:0,4:4:9.03:149,9,0
chr10	97090194	.	AC	A	139.63	PASS	AC=6;AF=0.125;AN=48;BaseQRankSum=3.112;DP=94;FS=2.331;HRun=5;HaplotypeScore=15.2934;InbreedingCoeff=0.4032;MQ=116.28;MQ0=0;MQRankSum=-3.341;QD=12.69;ReadPosRankSum=0.466;VQSLOD=0.4059;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:9.03:0,9,123	0/0:1,0:1:3.01:0,3,41	0/0:14,0:11:26.94:0,27,323	0/0:10,0:9:14.67:0,15,138	0/0:4,0:4:12.04:0,12,164	0/0:2,0:2:6.02:0,6,82	0/0:2,0:2:3.01:0,3,41	1/1:3,4:7:15.03:157,15,0	./.	0/0:1,0:1:3.01:0,3,41	0/0:4,0:4:9.03:0,9,123	0/0:2,0:2:6.02:0,6,82	0/0:2,0:2:6.02:0,6,82	0/0:2,0:2:6.02:0,6,82	0/0:2,0:2:6.02:0,6,82	./.	./.	./.	0/0:4,0:4:9.03:0,9,120	0/0:1,0:1:3:0,3,25	0/0:11,0:11:30.06:0,30,388	0/0:2,0:2:6.02:0,6,81	0/0:4,0:4:9.03:0,9,123	0/0:2,0:2:3.01:0,3,41	0/0:1,0:1:3.01:0,3,41	1/1:1,2:3:6.01:63,6,0	0/0:2,0:2:6:0,6,65	1/1:0,1:1:3.01:33,3,0
chr10	97090202	.	CT	C	159.71	PASS	AB=1.000;AC=7;AF=0.146;AN=48;BaseQRankSum=2.897;DP=73;FS=0.000;HRun=1;HaplotypeScore=15.2521;InbreedingCoeff=0.3141;MQ=121.57;MQ0=1;MQRankSum=-3.369;QD=17.75;ReadPosRankSum=-0.658;VQSLOD=3.3022;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:6.02:0,6,94	0/0:1,0:1:3.01:0,3,47	0/0:15,0:11:29.68:0,30,314	0/0:11,0:10:17.32:0,17,183	0/0:4,0:4:12.04:0,12,185	0/0:2,0:2:6.02:0,6,91	0/0:1,0:1:3.01:0,3,44	1/1:0,4:4:12.04:153,12,0	./.	0/0:1,0:1:3.01:0,3,46	0/0:2,0:2:6.02:0,6,92	0/0:1,0:1:3.01:0,3,47	0/0:4,0:4:12.03:0,12,164	0/0:2,0:2:6.02:0,6,94	0/0:2,0:2:6.02:0,6,94	./.	./.	./.	0/1:2,0:2:3.75:4,0,14	0/0:1,0:1:2.96:0,3,19	0/0:8,0:8:18.03:0,18,256	0/0:1,0:1:3.01:0,3,47	0/0:3,0:3:6.01:0,6,72	0/0:1,0:1:3.01:0,3,47	0/0:1,0:1:3.01:0,3,47	1/1:0,2:2:6.02:75,6,0	0/0:1,0:1:3.01:0,3,47	1/1:0,1:1:3.01:41,3,0
chr10	97091100	.	G	GA	2480.81	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-11.153;DP=455;FS=7.171;HRun=6;HaplotypeScore=42.7083;InbreedingCoeff=0.9906;MQ=66.13;MQ0=2;MQRankSum=0.906;QD=27.87;ReadPosRankSum=-0.103;VQSLOD=3.5834;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:48.15:604,48,0	0/0:6,0:6:15.03:0,15,153	0/0:15,0:13:26.59:0,27,246	0/0:9,0:9:15.01:0,15,144	0/0:19,0:19:51.11:0,51,520	0/0:24,0:24:63.14:0,63,643	0/0:14,0:14:39.09:0,39,398	1/1:3,17:20:51.14:625,51,0	0/0:16,0:16:48.11:0,48,490	0/0:17,0:17:51.11:0,51,515	0/0:13,0:13:36.08:0,36,367	0/0:13,0:13:33.04:0,33,328	0/0:21,0:21:63.14:0,63,641	0/0:11,0:11:27.06:0,27,275	0/0:19,0:19:54.12:0,54,551	1/1:3,16:19:39.12:487,39,0	0/0:26,0:26:60.13:0,60,610	1/1:4,15:19:45.14:564,45,0	0/0:15,0:14:42.09:0,42,428	0/0:21,0:21:60.13:0,60,612	0/0:15,0:15:42.09:0,42,428	0/0:8,0:8:21.05:0,21,214	0/0:13,0:13:27.04:0,27,269	0/0:14,0:14:42.10:0,42,429	0/0:11,0:11:33.07:0,33,336	0/0:24,0:23:69.15:0,69,703	0/0:22,0:21:54.12:0,54,550	1/1:3,10:13:30.10:376,30,0
chr10	97091685	.	C	CT	1181.88	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.126;DP=521;FS=19.992;HRun=7;HaplotypeScore=51.3346;InbreedingCoeff=0.9912;MQ=87.68;MQ0=0;MQRankSum=-2.392;QD=25.69;ReadPosRankSum=-1.269;VQSLOD=1.6915;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.10:0,66,637	0/0:6,0:6:18.03:0,18,174	0/0:19,0:19:38.50:0,39,340	0/0:20,0:20:22.11:0,22,252	0/0:19,0:19:39.05:0,39,376	0/0:24,0:24:72.12:0,72,695	0/0:10,0:10:30.05:0,30,290	1/1:4,17:21:51.16:615,51,0	0/0:17,0:17:48.06:0,48,457	0/0:15,0:15:45.06:0,45,430	0/0:17,0:17:42.06:0,42,406	0/0:14,0:14:33.05:0,33,319	0/0:19,0:19:42.06:0,42,406	0/0:29,0:29:75.11:0,75,724	0/0:12,0:12:30.02:0,30,283	0/0:33,0:33:93.14:0,93,896	0/0:16,0:16:45.07:0,45,435	0/0:14,0:14:39.06:0,39,377	0/0:23,0:23:51.07:0,51,493	0/0:13,0:13:36.06:0,36,348	0/0:20,0:20:60.08:0,60,573	0/0:7,0:7:21.03:0,21,203	0/0:19,0:19:54.08:0,54,521	0/0:18,0:18:42.07:0,42,406	0/0:14,0:14:36.06:0,36,347	0/0:30,0:30:87.14:0,87,840	0/0:24,0:24:69.06:0,69,647	1/1:4,20:25:57.17:689,57,0
chr10	97091958	.	A	AC	770.37	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.910;DP=571;FS=3.696;HRun=7;HaplotypeScore=56.0995;InbreedingCoeff=0.9817;MQ=87.56;MQ0=0;MQRankSum=-2.226;QD=19.75;ReadPosRankSum=-2.892;VQSLOD=2.6561;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.02:0,78,730	0/0:10,0:10:27.04:0,27,261	0/0:25,0:24:56.83:0,57,574	0/0:22,0:21:29.15:0,29,397	0/0:16,0:16:42.06:0,42,400	0/0:25,0:25:75.09:0,75,712	0/0:17,0:17:42.05:0,42,400	1/1:7,28:35:63.11:742,63,0	0/0:16,0:16:48.05:0,48,452	0/0:19,0:19:57.09:0,57,550	0/0:21,0:21:60.07:0,60,569	0/0:15,0:15:45.01:0,45,420	0/0:22,0:22:60.09:0,60,578	0/0:18,0:18:51.07:0,51,487	0/0:12,0:12:33.02:0,33,304	0/0:17,0:17:51.06:0,51,483	0/0:44,0:44:99:0,117,1115	0/0:17,0:17:48.07:0,48,463	0/0:34,0:34:87.09:0,87,821	0/0:22,0:22:66.09:0,66,632	0/0:25,0:25:74.15:0,74,701	0/0:9,0:9:24.04:0,24,232	0/0:22,0:22:47.16:0,47,462	0/0:19,0:19:51.07:0,51,488	0/0:20,0:19:57.04:0,57,537	0/0:13,0:13:33.05:0,33,319	0/0:22,0:22:54.05:0,54,510	1/1:0,4:4:12.04:145,12,0
chr10	97093521	.	AT	A	482.99	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.704;DP=724;FS=2.043;HRun=5;HaplotypeScore=67.5986;InbreedingCoeff=0.9998;MQ=84.23;MQ0=0;MQRankSum=-3.689;QD=25.42;ReadPosRankSum=1.036;VQSLOD=2.9736;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:75.25:0,75,1020	0/0:13,0:13:39.12:0,39,517	0/0:23,0:23:63.14:0,63,794	0/0:22,0:22:55.67:0,56,690	0/0:36,0:36:99:0,105,1426	0/0:25,0:25:72.24:0,72,985	0/0:36,0:36:99:0,108,1444	0/0:36,0:36:99:0,102,1345	0/0:23,0:23:63.21:0,63,859	0/0:41,0:41:99:0,102,1380	0/0:16,0:16:45.15:0,45,609	0/0:23,0:23:69.23:0,69,944	0/0:25,0:25:75.22:0,75,978	0/0:16,0:16:48.16:0,48,657	0/0:34,0:34:93.30:0,93,1256	0/0:28,0:28:78.25:0,78,1053	0/0:24,0:24:69.22:0,69,928	1/1:2,17:19:51.14:578,51,0	0/0:15,0:15:42.14:0,42,572	0/0:24,0:24:72.22:0,72,964	0/0:21,0:21:60.20:0,60,820	0/0:25,0:25:69.22:0,69,929	0/0:29,0:29:87.28:0,87,1173	0/0:40,0:40:99:0,108,1477	0/0:25,0:25:75.24:0,75,1013	0/0:28,0:28:78.25:0,78,1050	0/0:33,0:33:99:0,99,1289	0/0:14,0:14:39.13:0,39,533
chr10	97094642	.	CCTGCTT	C	387.79	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.286;DP=740;FS=0.000;HRun=0;HaplotypeScore=146.9982;InbreedingCoeff=0.9914;MQ=84.48;MQ0=0;MQRankSum=-4.539;QD=27.70;ReadPosRankSum=-1.202;VQSLOD=2.6897;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,3782	0/0:12,0:12:29.93:0,30,953	0/0:27,0:27:59.64:0,60,1895	0/0:18,0:18:45.15:0,45,1534	0/0:26,0:26:78.25:0,78,2637	0/0:19,0:19:57.15:0,57,1859	0/0:35,0:35:99:0,99,3289	0/0:28,0:28:75.26:0,75,2562	0/0:26,0:26:72.25:0,72,2448	0/0:24,0:24:69.24:0,69,2221	0/0:21,0:21:60.21:0,60,2024	0/0:29,0:29:84.28:0,84,2840	0/0:32,0:32:93.32:0,93,3165	0/0:19,0:19:54.19:0,54,1884	0/0:39,0:39:99:0,105,3629	0/0:27,0:27:78.27:0,78,2724	0/0:42,0:42:99:0,111,3773	1/1:3,11:14:21.07:480,21,0	0/0:32,0:32:81.28:0,81,2659	0/0:23,0:23:69.22:0,69,2333	0/0:57,0:57:99:0,157,5320	0/0:23,0:23:69.19:0,69,2305	0/0:16,0:16:45.15:0,45,1578	0/0:30,0:30:78.26:0,78,2632	0/0:24,0:24:69.23:0,69,2260	0/0:22,0:22:63.22:0,63,2192	0/0:29,0:29:87.28:0,87,2842	0/0:7,0:7:21.07:0,21,728
chr10	97094966	.	A	AT	370.79	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-4.226;DP=613;FS=0.000;HRun=11;HaplotypeScore=65.2750;InbreedingCoeff=0.5232;MQ=76.14;MQ0=0;MQRankSum=-1.075;QD=8.43;ReadPosRankSum=0.480;VQSLOD=2.2370;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:26:65.86:0,66,482	0/0:13,0:13:29.83:0,30,228	0/1:21,0:20:25.62:26,0,58	0/0:16,0:15:17.60:0,18,113	0/0:21,0:22:52.79:0,53,400	0/0:22,0:24:57.84:0,58,430	0/0:25,0:25:56.70:0,57,436	0/0:24,0:25:46.82:0,47,350	0/0:14,0:15:34.89:0,35,261	0/0:28,0:28:62.73:0,63,486	0/0:21,0:21:59.76:0,60,464	0/0:23,1:24:20.33:0,20,341	0/0:22,0:24:66.83:0,67,499	0/0:22,0:23:52.80:0,53,401	0/0:21,0:21:47.72:0,48,365	0/0:20,0:20:50.79:0,51,393	0/0:31,0:32:82.72:0,83,633	1/1:4,19:23:7.63:441,8,0	0/0:18,0:18:38.82:0,39,302	0/0:29,0:29:62.71:0,63,487	0/0:19,0:19:41.81:0,42,323	0/0:21,0:21:53.73:0,54,412	0/0:23,0:24:61.56:0,62,469	0/0:14,0:15:34.89:0,35,258	0/0:20,0:20:50.80:0,51,395	0/0:24,0:24:62.73:0,63,484	0/0:26,0:26:58.99:0,59,519	0/0:13,1:14:5.37:0,5,222
chr10	97095562	.	A	AT	2633.27	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-11.381;DP=424;FS=2.080;HRun=8;HaplotypeScore=42.9073;InbreedingCoeff=0.9803;MQ=79.88;MQ0=0;MQRankSum=-3.142;QD=28.31;ReadPosRankSum=0.577;VQSLOD=3.9423;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:48.14:554,48,0	0/0:5,0:5:15.01:0,15,137	0/0:13,0:12:14.74:0,15,136	0/0:13,0:12:13.38:0,13,120	0/0:17,0:17:47.99:0,48,429	0/0:9,0:9:27.01:0,27,247	0/0:18,0:18:51.03:0,51,467	1/1:4,23:27:69.19:785,69,0	0/0:15,0:15:42.02:0,42,384	0/0:13,0:13:36.02:0,36,329	0/0:17,0:17:42:0,42,379	0/0:10,0:10:27.01:0,27,247	0/0:18,0:18:48.02:0,48,439	0/0:21,1:22:25.41:0,25,487	0/0:13,0:13:36.02:0,36,330	1/1:3,10:13:30.09:346,30,0	0/0:29,0:29:74.98:0,75,673	1/1:3,23:26:69.07:777,69,0	0/0:13,0:13:33:0,33,298	0/0:7,0:7:21.01:0,21,192	0/0:13,0:13:33.02:0,33,302	0/0:7,0:7:21.01:0,21,192	0/0:6,0:6:15:0,15,137	0/0:18,0:18:53.98:0,54,486	0/0:23,0:23:69.04:0,69,632	0/0:16,0:16:39.02:0,39,357	0/0:16,0:16:48.03:0,48,439	1/1:0,10:10:30.09:346,30,0
chr10	97095711	.	GA	G	1260.62	PASS	AB=0.891;AC=13;AF=0.232;AN=56;BaseQRankSum=7.933;DP=479;FS=0.000;HRun=11;HaplotypeScore=54.0513;InbreedingCoeff=0.6785;MQ=73.72;MQ0=3;MQRankSum=0.342;QD=10.00;ReadPosRankSum=2.051;VQSLOD=2.4652;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:41.95:345,42,0	0/0:7,0:7:13.43:0,13,147	0/0:30,0:17:17.66:0,18,210	0/0:18,0:13:3.88:0,4,53	0/1:13,1:17:4.57:5,0,317	0/1:14,2:17:4.34:4,0,353	0/0:16,0:16:45.08:0,45,468	1/1:5,15:20:41.91:344,42,0	0/0:12,0:12:27.06:0,27,281	0/0:15,0:17:41.77:0,42,412	0/0:20,0:22:29.45:0,29,496	0/0:10,0:10:30.06:0,30,309	0/0:12,1:13:8.45:0,8,293	0/0:19,0:19:48.11:0,48,504	0/1:12,2:15:20.05:20,0,252	1/1:3,8:11:23.96:197,24,0	0/0:41,3:45:70.87:0,71,1131	1/1:3,19:23:49.98:400,50,0	0/0:18,0:18:14.50:0,14,353	0/0:14,0:14:39.10:0,39,414	0/0:6,0:8:17.80:0,18,158	0/0:4,1:4:6.02:0,6,64	0/0:14,0:16:38.92:0,39,391	0/0:20,0:20:51.10:0,51,528	0/0:18,0:20:50.79:0,51,502	0/0:26,1:27:35.51:0,36,583	0/0:15,1:16:20.47:0,20,423	1/1:0,5:5:14.98:123,15,0
chr10	97099643	.	GAAGCTA	G	1931.40	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.086;DP=829;FS=22.306;HRun=0;HaplotypeScore=168.2868;InbreedingCoeff=0.9693;MQ=86.38;MQ0=0;MQRankSum=-7.078;QD=58.53;ReadPosRankSum=-2.866;VQSLOD=1.3718;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,4717	0/0:20,0:20:57.20:0,57,1999	0/0:31,0:31:80.75:0,81,2553	0/0:24,0:24:56.44:0,56,1748	0/0:28,0:28:81.26:0,81,2761	0/0:20,0:20:54.19:0,54,1779	0/0:35,0:35:99:0,99,3343	1/1:2,28:30:81.25:1830,81,0	0/0:32,0:32:96.26:0,96,3207	0/0:36,0:36:99:0,99,3273	0/0:33,0:33:99:0,99,3511	0/0:35,0:35:99:0,105,3679	0/0:41,0:41:99:0,117,4082	0/0:29,0:29:84.29:0,84,2956	0/0:35,0:35:99:0,105,3666	0/0:31,0:31:90.31:0,90,3144	0/0:39,0:39:99:0,114,4048	0/0:21,0:21:63.15:0,63,2051	0/0:23,0:23:60.20:0,60,2008	0/0:27,0:27:78.25:0,78,2730	0/0:50,0:50:99:0,147,5169	0/0:41,0:41:99:0,120,4091	0/0:24,0:24:69.24:0,69,2285	0/0:26,0:26:72.25:0,72,2585	0/0:22,0:22:66.23:0,66,2211	0/0:15,0:15:45.15:0,45,1623	0/0:32,0:31:96.28:0,96,3185	1/1:0,3:3:9.03:216,9,0
chr10	97100891	.	CTGTGTGCCTGTG	C	822.84	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.533;DP=845;FS=1.596;HRun=0;HaplotypeScore=292.0122;InbreedingCoeff=0.9616;MQ=55.68;MQ0=11;MQRankSum=-8.516;QD=11.59;ReadPosRankSum=-4.663;VQSLOD=0.9583;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,33:51:29.91:397,30,0	0/0:9,0:9:18.06:0,18,767	0/0:34,0:21:36.12:0,36,1311	0/0:44,0:25:46.71:0,47,1536	0/0:14,0:14:20.98:0,21,1007	0/0:15,0:14:33.11:0,33,1360	0/0:50,0:49:99:0,114,4956	0/0:24,0:22:48.15:0,48,1806	0/0:31,0:31:61.86:0,62,2850	0/0:37,0:37:96.32:0,96,4023	0/0:10,0:10:30.09:0,30,1390	0/0:45,0:45:99:0,101,4545	0/0:30,0:30:72.24:0,72,3258	0/0:32,0:32:29.37:0,29,2319	0/0:30,0:29:72.22:0,72,3050	1/1:9,11:20:32.95:547,33,0	0/0:44,0:44:93.31:0,93,4295	0/0:26,0:26:54.13:0,54,2168	0/0:20,0:18:27.08:0,27,860	0/0:14,0:13:24.08:0,24,1104	0/0:110,0:108:99:0,228,10170	0/0:20,0:20:45.14:0,45,1974	0/0:15,0:15:26.26:0,26,1223	0/0:50,0:50:99:0,114,5119	0/0:31,0:30:65.95:0,66,2900	0/0:20,0:18:54.19:0,54,2737	0/0:4,0:4:9.03:0,9,463	0/0:12,0:12:36.10:0,36,1615
chr10	97100918	.	TTG	T	746.31	PASS	AB=0.976;AC=26;AF=0.500;AN=52;BaseQRankSum=2.511;DP=895;FS=2.665;HRun=0;HaplotypeScore=171.5867;InbreedingCoeff=-0.4048;MQ=50.03;MQ0=30;MQRankSum=-1.476;QD=1.11;ReadPosRankSum=-1.797;VQSLOD=2.0075;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:49:1.14:0,1,4	0/0:6,0:5:6.01:0,6,69	./.	./.	0/1:15,0:15:20.63:21,0,118	0/1:21,0:19:12.07:12,0,303	0/1:59,0:54:84.31:84,0,277	0/0:33,0:30:3.85:0,4,11	0/1:28,1:29:53.26:53,0,193	0/1:33,0:32:17.17:17,0,81	0/1:12,0:12:22.48:22,0,59	0/1:37,5:42:1.23:1,0,231	0/1:31,1:30:81.68:82,0,130	0/1:26,1:29:74.85:75,0,110	1/1:18,0:25:5.66:28,6,0	1/1:17,0:21:7.73:36,8,0	0/0:42,6:47:14.51:0,15,463	1/1:18,0:23:11.36:56,11,0	0/1:19,0:15:12.81:13,0,14	0/1:15,0:13:41.57:42,0,75	0/1:110,0:109:99:100,0,492	0/1:24,0:24:9.34:9,0,162	0/1:20,0:20:11.25:11,0,175	0/1:58,1:60:99:134,0,511	0/1:28,0:28:43.96:76,0,44	0/1:28,0:25:2.18:2,0,71	0/1:8,0:8:7.80:8,0,58	1/1:13,0:11:4.07:11,4,0
chr10	97103061	.	TTCTG	T	2812.45	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.447;DP=670;FS=4.959;HRun=0;HaplotypeScore=108.2127;InbreedingCoeff=0.9991;MQ=90.28;MQ0=1;MQRankSum=-5.194;QD=41.36;ReadPosRankSum=2.839;VQSLOD=3.8524;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,34:37:77.59:1394,78,0	0/0:11,0:11:33.11:0,33,835	0/0:23,0:23:66.23:0,66,1707	0/0:29,0:29:78.27:0,78,1952	0/0:14,0:14:36.12:0,36,969	0/0:24,0:24:66.23:0,66,1712	0/0:29,0:29:81.23:0,81,2020	0/0:23,0:23:54.19:0,54,1451	0/0:26,0:26:66.23:0,66,1767	0/0:20,0:20:57.19:0,57,1468	0/0:16,0:16:45.15:0,45,1211	0/0:35,0:35:99:0,105,2719	0/0:21,0:21:63.22:0,63,1697	0/0:31,0:31:90.31:0,90,2385	0/0:28,0:28:81.28:0,81,2143	1/1:0,31:31:84.24:1540,84,0	0/0:37,0:37:99:0,111,2937	0/0:24,0:24:66.23:0,66,1780	0/0:18,0:18:51.16:0,51,1239	0/0:21,0:21:63.20:0,63,1624	0/0:25,0:24:69.24:0,69,1830	0/0:21,0:21:60.21:0,60,1595	0/0:15,0:15:39.13:0,39,959	0/0:36,0:36:99:0,108,2859	0/0:12,0:12:33.11:0,33,884	0/0:24,0:24:69.23:0,69,1808	0/0:30,0:30:87.30:0,87,2283	0/0:9,0:9:27.09:0,27,728
chr10	97103518	.	G	GTTT	678.96	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.335;DP=563;FS=0.000;HRun=11;HaplotypeScore=88.5871;InbreedingCoeff=0.9136;MQ=71.65;MQ0=6;MQRankSum=-1.719;QD=29.52;ReadPosRankSum=0.927;VQSLOD=2.9666;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:42:99:0,105,1189	0/0:11,0:12:29.97:0,30,333	0/0:31,0:23:28.49:0,28,223	0/0:21,0:13:8.25:0,8,100	0/0:21,0:22:46.65:0,47,558	0/0:16,0:16:48.13:0,48,548	0/0:24,0:24:60.12:0,60,700	0/0:25,0:24:33.26:0,33,363	0/0:15,0:15:36.04:0,36,413	0/0:17,0:18:44.85:0,45,492	0/0:18,0:18:47.88:0,48,533	0/0:18,0:18:35.69:0,36,420	0/0:7,0:7:18.03:0,18,210	0/0:18,0:18:23.89:0,24,466	0/0:11,0:11:19.56:0,20,230	0/0:11,0:11:33.10:0,33,383	0/0:46,0:46:99:0,111,1257	1/1:7,16:22:41.93:774,42,0	0/0:29,0:29:21.61:0,22,568	0/0:19,0:21:53.91:0,54,582	0/0:13,0:13:33.06:0,33,382	0/0:16,0:19:42.19:0,42,519	0/0:13,0:13:30.01:0,30,350	0/0:23,0:26:66.13:0,66,762	0/0:16,0:17:38.95:0,39,436	0/0:16,0:17:43.56:0,44,503	0/0:17,0:17:39.10:0,39,456	0/0:7,0:7:21.06:0,21,243
chr10	97104359	.	C	CTTCTTG	2420.20	PASS	AB=0.600;AC=9;AF=0.161;AN=56;BaseQRankSum=2.633;DP=639;FS=6.895;HRun=0;HaplotypeScore=130.9561;InbreedingCoeff=0.8425;MQ=67.83;MQ0=0;MQRankSum=-6.847;QD=27.82;ReadPosRankSum=-2.327;VQSLOD=2.2903;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,11:18:16.77:290,0,17	0/0:10,0:10:24.08:0,24,511	0/0:27,0:26:29.15:0,29,526	0/0:27,0:24:24.01:0,24,677	0/0:19,0:19:48.16:0,48,990	0/0:15,0:15:30.08:0,30,597	0/0:26,0:26:36.11:0,36,701	1/1:27,0:27:51.08:1009,51,0	0/0:22,0:22:51.17:0,51,1044	0/0:27,0:26:56.96:0,57,1000	0/0:31,0:29:52.52:0,53,1131	0/0:25,0:24:39.38:0,39,1133	0/0:22,0:22:39.13:0,39,828	0/0:16,0:16:36.10:0,36,651	0/0:24,0:21:54.16:0,54,1025	1/1:6,8:14:12.04:399,12,0	0/0:29,0:28:33.84:0,34,1161	1/1:15,2:17:24.03:583,24,0	0/0:30,0:30:48.11:0,48,869	0/0:20,0:20:51.16:0,51,1009	0/0:39,0:38:75.23:0,75,1487	0/0:24,0:24:45.11:0,45,942	0/0:15,0:16:19.62:0,20,745	0/0:33,0:32:62.83:0,63,1401	0/0:24,0:24:63.21:0,63,1291	0/0:25,0:25:57.15:0,57,1122	0/0:21,0:20:48.09:0,48,902	1/1:0,9:11:9.03:299,9,0
chr10	97104377	.	GTCC	G	485.43	PASS	AB=0.838;AC=3;AF=0.054;AN=56;BaseQRankSum=8.001;DP=583;FS=2.682;HRun=0;HaplotypeScore=102.2692;InbreedingCoeff=-0.0620;MQ=60.65;MQ0=0;MQRankSum=-6.396;QD=8.99;ReadPosRankSum=-3.298;VQSLOD=2.2716;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:95.19:95,0,163	0/0:8,0:8:24.08:0,24,567	0/0:25,0:21:45.59:0,46,896	0/0:27,0:21:28.54:0,29,876	0/0:17,0:17:51.18:0,51,1186	0/0:15,0:15:42.14:0,42,951	0/0:25,0:24:37.87:0,38,1111	0/1:15,10:25:99:345,0,650	0/0:23,0:23:63.69:0,64,1423	0/0:26,0:25:70.57:0,71,1444	0/0:21,0:21:58.75:0,59,1338	0/0:22,0:21:50.06:0,50,1264	0/0:17,0:17:45.15:0,45,1052	0/0:14,0:14:42.13:0,42,923	0/0:22,0:20:57.17:0,57,1219	0/0:9,0:9:9.10:0,9,222	0/0:31,0:29:47.83:0,48,1658	0/1:9,3:12:44.90:145,0,45	0/0:21,0:21:60.16:0,60,1227	0/0:22,0:22:66.21:0,66,1471	0/0:33,0:31:81.27:0,81,1850	0/0:20,0:20:59.79:0,60,1339	0/0:19,0:19:47.72:0,48,1182	0/0:31,0:30:81.25:0,81,1852	0/0:22,0:22:63.21:0,63,1446	0/0:23,0:23:66.18:0,66,1433	0/0:22,0:21:54.16:0,54,1152	0/0:14,0:14:7.32:0,7,283
chr10	97104807	.	C	CCT	242.56	PASS	AB=0.979;AC=15;AF=0.288;AN=52;BaseQRankSum=6.433;DP=213;FS=19.544;HRun=0;HaplotypeScore=48.2322;InbreedingCoeff=-0.2932;MQ=69.16;MQ0=6;MQRankSum=-2.867;QD=2.25;ReadPosRankSum=2.613;VQSLOD=0.1142;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:4,0:4:12.68:13,0,103	0/0:23,0:11:19.36:0,19,261	0/1:26,0:14:12.74:13,0,228	0/0:6,0:4:0.60:0,1,70	0/1:6,0:4:6.81:7,0,66	0/1:6,0:5:62.60:74,0,63	0/0:7,0:6:17.26:0,17,188	0/1:4,0:4:20.04:20,0,103	0/0:10,0:7:7.64:0,8,113	0/0:7,0:6:7.88:0,8,114	0/1:5,0:5:28.82:29,0,43	0/1:6,0:6:8.96:9,0,76	0/0:1,0:1:3:0,3,25	0/0:3,0:1:2.74:0,3,12	1/1:2,0:2:6.02:64,6,0	0/1:12,0:10:14.84:15,0,244	0/0:5,0:5:8.70:0,9,88	0/0:3,0:3:9.03:0,9,116	0/0:5,0:5:15.03:0,15,178	0/0:10,0:9:12.02:0,12,140	0/1:10,0:10:19.27:19,0,110	0/1:4,0:4:29.63:35,0,30	0/0:6,0:6:11.97:0,12,155	0/1:8,0:8:48.41:48,0,135	0/1:7,0:5:4.96:5,0,67	0/1:5,0:5:35.28:35,0,65	./.
chr10	97107024	.	A	ATG	256.98	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.802;DP=769;FS=2.388;HRun=0;HaplotypeScore=120.7628;InbreedingCoeff=0.8075;MQ=63.48;MQ0=7;MQRankSum=-4.595;QD=12.24;ReadPosRankSum=-1.133;VQSLOD=3.1612;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,111,1370	0/0:4,0:4:6.02:0,6,81	0/0:33,0:22:51.08:0,51,628	0/0:40,0:33:84.44:0,84,1022	0/0:20,0:20:30.04:0,30,399	0/0:24,0:24:65.22:0,65,873	0/0:30,0:30:81.27:0,81,1084	0/0:24,0:24:44.77:0,45,750	0/0:27,0:27:78.26:0,78,1049	0/0:37,0:37:87.14:0,87,1250	0/0:17,0:17:35.72:0,36,470	0/0:32,0:32:78.21:0,78,1046	0/0:29,0:29:78.25:0,78,1032	0/0:35,0:35:96.30:0,96,1284	0/0:20,0:20:48.15:0,48,628	0/0:31,0:31:76.76:0,77,932	0/0:36,0:36:94.75:0,95,1282	1/1:9,12:20:19.70:348,20,0	0/0:21,0:21:53.97:0,54,729	0/0:18,0:18:27.07:0,27,344	0/0:71,0:70:99:0,190,2505	0/0:24,0:23:48.12:0,48,614	0/0:11,0:11:20.96:0,21,280	0/0:39,0:38:99:0,102,1339	0/0:19,0:19:48.16:0,48,630	0/0:35,0:35:93.25:0,93,1220	0/0:20,0:20:57.18:0,57,759	0/0:4,0:4:5.27:0,5,21
chr10	97107035	.	C	CGT	1254.63	PASS	AB=0.859;AC=12;AF=0.231;AN=52;BaseQRankSum=-0.283;DP=817;FS=0.000;HRun=0;HaplotypeScore=127.2268;InbreedingCoeff=0.3316;MQ=57.16;MQ0=13;MQRankSum=-1.119;QD=4.39;ReadPosRankSum=0.678;VQSLOD=2.9280;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,23:51:25.43:505,0,25	0/0:5,0:5:3.01:0,3,34	./.	./.	0/0:17,0:18:8.97:0,9,101	0/0:21,0:25:39.22:0,39,359	0/0:32,0:34:41.21:0,41,478	1/1:27,0:27:14.29:147,14,0	0/1:28,1:29:12.72:13,0,294	0/0:36,0:38:28.65:0,29,537	0/0:18,0:18:26.69:0,27,301	0/0:33,0:34:56.83:0,57,601	0/0:29,0:29:39.11:0,39,437	0/0:33,0:34:32.67:0,33,319	0/1:17,2:20:16.11:16,0,234	0/1:13,14:28:8.78:464,0,9	0/0:36,0:38:69.73:0,70,728	1/1:21,0:20:20.17:188,20,0	0/0:34,0:29:23.14:0,23,243	0/0:18,0:19:29.92:0,30,318	0/1:74,2:79:0.57:1,0,850	0/0:21,0:24:10.82:0,11,306	0/0:13,0:15:20.79:0,21,216	0/0:43,0:43:74.97:0,75,807	0/0:21,0:21:26.43:0,26,279	0/0:34,0:37:27.13:0,27,390	0/1:21,1:22:22.07:22,0,211	1/1:0,0:7:6:52,6,0
chr10	97107173	.	CGT	C	871.70	PASS	AB=0.882;AC=23;AF=0.426;AN=54;BaseQRankSum=9.056;DP=805;FS=28.597;HRun=0;HaplotypeScore=134.1772;InbreedingCoeff=-0.0720;MQ=56.08;MQ0=16;MQRankSum=-1.838;QD=1.60;ReadPosRankSum=2.650;VQSLOD=0.6789;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:36:4.38:63,0,4	0/0:14,0:14:9.03:0,9,135	./.	0/0:33,0:18:1.25:0,1,3	0/0:14,0:21:3.66:0,4,49	0/1:14,1:15:15.46:15,0,209	0/1:29,6:35:67.44:67,0,308	1/1:25,5:30:13.46:145,13,0	0/1:34,4:38:33.96:34,0,345	0/0:30,0:29:27.97:0,28,382	0/1:9,0:9:26.97:27,0,40	0/0:33,0:34:0.62:0,1,563	0/1:37,3:39:6.36:6,0,705	0/1:38,1:41:34.89:35,0,608	0/1:28,2:32:56.55:57,0,364	1/1:15,0:25:17.04:84,17,0	0/0:23,0:24:27.94:0,28,521	1/1:9,0:11:2.84:14,3,0	0/1:19,2:16:48.18:48,0,161	0/1:11,3:14:73.48:73,0,202	0/1:74,10:83:16.74:17,0,1372	0/0:21,0:21:9.03:0,9,134	0/1:12,3:15:15.48:15,0,178	0/1:50,8:58:76.34:76,0,1177	1/1:10,0:22:25.36:125,25,0	0/0:23,0:25:10.39:0,10,256	0/0:28,0:26:33.03:0,33,469	1/1:8,8:16:12.03:134,12,0
chr10	97107383	.	GC	G	13966.47	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=-0.151;DP=506;FS=3.013;HRun=1;HaplotypeScore=393.3004;InbreedingCoeff=0.7627;MQ=34.97;MQ0=0;MQRankSum=-2.080;QD=27.71;ReadPosRankSum=1.662;VQSLOD=2.9527;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:33:53.67:650,54,0	1/1:1,6:7:14.03:146,14,0	./.	0/0:2,0:2:5.51:0,6,54	1/1:0,12:12:17.98:249,18,0	1/1:0,19:19:42.14:579,42,0	1/1:0,30:30:60.15:808,60,0	1/1:0,27:27:80.76:1095,81,0	1/1:0,25:25:68.81:816,69,0	1/1:3,30:33:84.19:1132,84,0	1/1:0,9:9:17.09:214,17,0	1/1:1,21:22:36.08:479,36,0	1/1:0,31:30:69.19:938,69,0	1/1:0,21:21:48.07:624,48,0	1/1:0,34:34:86.85:1028,87,0	1/1:2,16:18:35.93:412,36,0	1/1:0,19:19:30.10:413,30,0	1/1:0,11:10:18.06:251,18,0	1/1:1,8:9:21.04:272,21,0	1/1:0,15:15:21.03:270,21,0	1/1:0,7:7:11.97:167,12,0	1/1:0,14:14:29.91:347,30,0	1/1:0,7:7:11.97:143,12,0	1/1:0,21:21:31.65:399,32,0	1/1:0,16:16:21:268,21,0	1/1:0,27:27:81.18:1085,81,0	1/1:1,28:29:66.18:888,66,0	1/1:0,7:7:21.07:293,21,0
chr10	97108705	.	GGA	G	96.02	PASS	AB=0.951;AC=16;AF=0.308;AN=52;BaseQRankSum=4.948;DP=582;FS=0.825;HRun=0;HaplotypeScore=68.4159;InbreedingCoeff=-0.2815;MQ=61.38;MQ0=15;MQRankSum=-1.099;QD=0.30;ReadPosRankSum=-0.892;VQSLOD=1.4050;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:0.46:1,0,0	0/0:9,0:9:8.11:0,8,113	./.	0/0:47,0:11:0:0,0,0	0/0:15,0:15:15.01:0,15,157	0/1:14,0:14:0.07:0,0,39	0/1:27,2:29:3.98:4,0,397	0/0:23,0:23:11.94:0,12,100	0/0:19,0:19:33.01:0,33,412	0/0:14,0:14:20.84:0,21,245	0/1:14,3:17:17.70:18,0,115	0/1:32,0:33:17.15:17,0,380	0/0:13,0:13:21.07:0,21,309	0/1:21,3:24:12.16:12,0,332	0/1:20,1:21:19.06:19,0,265	0/1:12,0:11:19.23:19,0,101	0/1:20,3:24:49.53:50,0,272	0/0:8,0:8:5.96:0,6,45	./.	0/1:13,1:14:20.71:21,0,120	0/0:24,0:27:27.05:0,27,337	0/1:25,1:26:17.65:18,0,139	0/0:14,0:18:6.01:0,6,71	0/1:13,1:21:23.74:24,0,43	0/0:24,0:24:14.54:0,15,300	0/1:24,0:24:6.38:6,0,238	0/1:25,0:24:0.54:1,0,330	0/1:12,0:12:19.73:20,0,91
chr10	97108741	.	AGAGAGAG	A	183	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=4.418;DP=626;FS=4.848;HRun=0;HaplotypeScore=122.7868;InbreedingCoeff=0.5270;MQ=57.03;MQ0=34;MQRankSum=-2.240;QD=4.16;ReadPosRankSum=2.084;VQSLOD=2.2130;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,13:21:6.02:96,6,0	0/0:8,0:8:18.06:0,18,518	0/0:29,0:11:27.05:0,27,338	0/0:51,0:14:33.57:0,34,421	0/0:14,0:14:24.08:0,24,645	0/0:22,0:22:42.14:0,42,735	0/0:29,0:29:64.10:0,64,1553	0/0:32,0:31:87.29:0,87,1394	0/0:24,0:24:61.03:0,61,1395	0/0:19,0:19:45.15:0,45,1177	0/0:17,0:17:27.08:0,27,642	0/0:30,0:30:17.77:0,18,1120	0/0:19,0:19:45.15:0,45,1062	0/0:24,0:24:57.18:0,57,1507	0/0:20,0:20:42.14:0,42,1119	0/1:16,0:13:93.05:181,0,93	0/0:20,0:20:45.07:0,45,863	0/0:11,0:11:14.78:0,15,245	0/0:14,0:12:21.02:0,21,251	0/0:11,0:10:18.05:0,18,331	0/0:35,0:34:59.91:0,60,1409	0/0:19,0:19:33.11:0,33,775	0/0:15,0:14:24.08:0,24,459	0/0:20,0:19:30.10:0,30,637	0/0:25,0:25:54.66:0,55,1558	0/0:21,0:21:57:0,57,940	0/0:33,0:32:75.21:0,75,1688	0/0:20,0:20:47.14:0,47,793
chr10	97108747	.	AG	A	235.39	PASS	AB=0.912;AC=5;AF=0.089;AN=56;BaseQRankSum=3.393;DP=568;FS=9.269;HRun=2;HaplotypeScore=56.9064;InbreedingCoeff=0.3897;MQ=64.02;MQ0=30;MQRankSum=-2.252;QD=3.57;ReadPosRankSum=0.751;VQSLOD=-0.3966;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:20,2:15:6.02:76,6,0	0/0:7,0:7:18.06:0,18,253	0/0:31,0:14:42.05:0,42,517	0/0:48,0:16:36.58:0,37,456	0/0:15,0:15:27.09:0,27,377	0/0:17,0:17:42.05:0,42,532	0/0:27,0:27:64.25:0,64,871	0/0:37,0:36:99:0,102,1320	0/0:23,0:23:60.15:0,60,816	0/0:16,0:16:48.16:0,48,662	0/0:20,0:20:38.58:0,39,474	0/0:25,0:25:54.73:0,55,656	0/0:17,0:17:51.14:0,51,688	0/0:24,0:24:59.55:0,60,787	0/0:16,0:16:47.62:0,48,611	0/1:9,5:11:21.22:176,0,21	0/0:17,0:17:43.58:0,44,506	0/1:11,0:11:2.70:76,0,3	0/0:11,0:9:26.94:0,27,313	0/0:8,0:7:20.54:0,21,238	0/0:29,1:29:66.19:0,66,881	0/0:12,0:12:32.32:0,32,423	0/0:13,0:12:24.06:0,24,307	0/0:16,0:15:29.54:0,30,335	0/0:22,1:23:34.76:0,35,818	0/0:21,0:21:61.85:0,62,755	0/0:28,0:27:80.70:0,81,1043	0/1:19,0:19:21.72:22,0,539
chr10	97108748	.	G	GA	265.86	PASS	AB=0.851;AC=5;AF=0.089;AN=56;BaseQRankSum=2.037;DP=568;FS=7.973;HRun=1;HaplotypeScore=57.9179;InbreedingCoeff=0.3318;MQ=64.14;MQ0=30;MQRankSum=-1.616;QD=4.22;ReadPosRankSum=0.530;VQSLOD=0.0040;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,5:14:6.02:76,6,0	0/0:7,0:7:18.06:0,18,246	0/0:31,0:14:42.05:0,42,521	0/0:48,0:16:36.41:0,36,457	0/0:14,0:14:27.09:0,27,363	0/0:18,0:18:42.05:0,42,538	0/0:29,0:29:64.74:0,65,863	0/0:37,0:36:99:0,102,1297	0/0:22,0:22:60:0,60,790	0/0:16,0:16:48.16:0,48,643	0/0:20,0:20:39.09:0,39,477	0/0:24,0:24:55.93:0,56,676	0/0:17,0:17:51.14:0,51,667	0/0:24,0:24:60.17:0,60,788	0/0:17,0:17:48.12:0,48,603	0/1:11,2:10:24.26:140,0,24	0/0:17,0:17:48.07:0,48,573	0/1:6,5:11:6.61:140,0,7	0/0:11,0:9:26.94:0,27,315	0/0:8,0:7:21.03:0,21,250	0/0:30,0:29:66.19:0,66,860	0/0:12,0:12:33.07:0,33,411	0/0:14,0:13:21.07:0,21,283	0/0:16,0:15:24.06:0,24,304	0/0:23,0:23:34.80:0,35,801	0/0:22,0:22:61.85:0,62,746	0/0:28,0:27:81.19:0,81,1024	0/1:18,0:18:23.99:24,0,501
chr10	97108912	.	CAGTT	C	835.77	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.388;DP=720;FS=6.874;HRun=0;HaplotypeScore=115.3126;InbreedingCoeff=0.9991;MQ=89.01;MQ0=0;MQRankSum=-1.126;QD=46.43;ReadPosRankSum=3.748;VQSLOD=3.8971;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,3546	0/0:11,0:11:30.10:0,30,822	0/0:28,0:28:81.27:0,81,2140	0/0:26,0:26:74.67:0,75,1708	0/0:36,0:36:99:0,105,2746	0/0:32,0:32:87.25:0,87,2245	0/0:24,0:24:72.25:0,72,1936	0/0:38,0:38:99:0,111,2863	0/0:23,0:23:69.24:0,69,1851	0/0:20,0:20:60.21:0,60,1644	0/0:12,0:12:33.11:0,33,853	0/0:27,0:27:75.26:0,75,2038	0/0:23,0:23:69.24:0,69,1839	0/0:23,0:23:59.98:0,60,1643	0/0:26,0:26:75.26:0,75,2044	0/0:20,0:20:60.21:0,60,1632	0/0:33,0:33:96.31:0,96,2567	1/1:0,18:18:48.16:931,48,0	0/0:26,0:26:75.26:0,75,1975	0/0:19,0:19:54.16:0,54,1364	0/0:36,0:36:99:0,99,2670	0/0:27,0:27:81.28:0,81,2154	0/0:20,0:20:57.19:0,57,1445	0/0:37,0:37:99:0,111,3022	0/0:21,0:21:63.17:0,63,1626	0/0:27,0:27:78.25:0,78,2042	0/0:30,0:30:84.29:0,84,2280	0/0:12,0:12:36.12:0,36,912
chr10	97109274	.	G	GT	2319.49	PASS	AB=0.833;AC=11;AF=0.196;AN=56;BaseQRankSum=-8.169;DP=585;FS=0.424;HRun=10;HaplotypeScore=66.2436;InbreedingCoeff=0.8195;MQ=80.65;MQ0=0;MQRankSum=-2.595;QD=18.86;ReadPosRankSum=-1.611;VQSLOD=3.7959;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,18:27:41.94:430,42,0	0/1:4,1:5:19.98:20,0,62	0/0:27,0:20:26.86:0,27,172	0/0:21,1:19:19.86:0,20,119	0/0:27,0:28:35.49:0,35,528	0/0:24,0:24:59.87:0,60,488	0/0:14,0:15:31.95:0,32,247	1/1:8,25:33:63.88:740,64,0	0/0:12,1:13:0.96:0,1,211	0/0:27,0:27:29.67:0,30,412	0/0:16,0:16:41.92:0,42,340	0/0:16,0:16:14.77:0,15,271	0/0:20,0:20:44.94:0,45,369	0/0:14,0:14:26.95:0,27,222	0/0:18,0:18:50.85:0,51,405	1/1:4,12:16:33:327,33,0	0/0:29,0:28:65.60:0,66,523	1/1:3,11:14:11.46:327,11,0	0/0:28,0:27:56.87:0,57,460	0/0:36,0:38:87.89:0,88,695	0/0:11,0:10:23.97:0,24,197	0/0:20,0:20:53.70:0,54,429	0/0:14,0:14:32.70:0,33,252	0/0:15,0:15:23.93:0,24,195	0/0:20,0:20:53.91:0,54,440	0/0:21,1:22:9.94:0,10,286	0/0:25,0:25:53.88:0,54,438	1/1:0,24:27:65.63:650,66,0
chr10	97109311	.	TTCTC	T	198	PASS	AB=0.907;AC=12;AF=0.240;AN=50;BaseQRankSum=3.790;DP=500;FS=2.899;HRun=0;HaplotypeScore=91.0530;InbreedingCoeff=0.2558;MQ=57.82;MQ0=7;MQRankSum=-1.834;QD=1.41;ReadPosRankSum=2.052;VQSLOD=1.3646;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:12.50:0,12,174	0/1:6,1:7:39.15:39,0,64	./.	./.	0/1:25,0:25:34.26:34,0,100	0/0:23,0:23:15.05:0,15,282	0/0:10,0:9:6.02:0,6,80	0/0:38,0:37:6.29:0,6,47	0/0:15,0:15:12.04:0,12,216	0/0:21,0:21:18.01:0,18,268	0/0:9,0:9:6.02:0,6,136	0/0:12,0:12:6.02:0,6,121	0/0:12,0:12:6.30:0,6,70	0/0:13,0:13:9.03:0,9,210	0/1:17,0:19:7.21:7,0,265	0/1:14,0:16:4.81:5,0,274	0/0:21,0:23:12.25:0,12,219	1/1:20,0:19:3:28,3,0	0/0:21,0:19:3:0,3,29	1/1:18,0:18:3:28,3,0	./.	0/0:19,0:19:9.03:0,9,184	0/0:20,0:20:12.03:0,12,190	0/0:15,0:15:21.07:0,21,428	0/0:20,0:20:3.01:0,3,47	1/1:17,1:17:2.28:45,2,0	1/1:7,6:15:11.75:148,12,0	0/0:20,0:20:2.74:0,3,12
chr10	97109338	.	TCTCTCTCTCTCTCTCTCTCTCTCTCG	T	134.62	PASS	AB=0.515;AC=1;AF=0.018;AN=56;BaseQRankSum=2.875;DP=525;FS=2.360;HRun=0;HaplotypeScore=255.9997;InbreedingCoeff=-0.0213;MQ=49.30;MQ0=20;MQRankSum=-0.792;QD=7.92;ReadPosRankSum=-0.997;VQSLOD=1.9912;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:49.48:0,49,3630	0/0:8,0:8:21.07:0,21,1631	0/0:27,0:4:11.78:0,12,243	0/0:34,0:11:21.25:0,21,522	0/0:21,0:20:48.16:0,48,3759	0/0:20,0:20:42.13:0,42,3467	0/0:11,0:10:30.06:0,30,1705	0/0:20,0:19:53.50:0,54,2284	0/0:13,0:13:24.04:0,24,1806	0/0:19,0:19:48.16:0,48,3615	0/0:9,0:9:12.04:0,12,1027	0/0:10,0:10:18.53:0,19,1387	0/0:12,0:12:30.56:0,31,2301	0/0:14,0:14:33.08:0,33,2465	0/0:20,0:20:54.19:0,54,4838	0/0:20,0:19:48.16:0,48,4285	0/0:27,0:25:63.03:0,63,4323	0/1:1,16:17:99:209,0,101	0/0:16,0:15:42.14:0,42,2607	0/0:20,0:18:48.63:0,49,2883	0/0:15,0:14:27.09:0,27,2067	0/0:25,0:23:54.19:0,54,4273	0/0:28,0:28:60.18:0,60,4585	0/0:16,0:16:45.15:0,45,3792	0/0:18,0:18:36.07:0,36,2577	0/0:28,0:26:76.80:0,77,5486	0/0:18,0:18:26.23:0,26,2873	0/0:10,0:9:21.07:0,21,1799
chr10	97110972	.	G	GT	3027.97	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=13.018;DP=654;FS=0.000;HRun=3;HaplotypeScore=74.8523;InbreedingCoeff=0.9940;MQ=77.65;MQ0=0;MQRankSum=-5.654;QD=35.62;ReadPosRankSum=2.762;VQSLOD=4.2372;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,41:43:99:1705,123,0	0/0:7,0:7:21.06:0,21,251	0/0:14,0:14:30.09:0,30,355	0/0:17,0:17:38.98:0,39,408	0/0:25,0:25:72.21:0,72,850	0/0:14,0:14:39.10:0,39,454	0/0:30,0:30:81.21:0,81,946	0/0:21,0:21:60.16:0,60,698	0/0:27,0:27:78.21:0,78,911	0/0:29,0:29:81.24:0,81,962	0/0:9,0:9:21.06:0,21,252	0/0:36,0:36:99:0,102,1199	0/0:21,0:21:63.19:0,63,755	0/0:22,0:22:60.17:0,60,707	0/0:23,0:23:69.12:0,69,799	1/1:0,17:17:48.07:647,48,0	0/0:28,0:28:78.19:0,78,899	1/1:1,24:25:60.17:819,60,0	0/0:18,0:18:54.15:0,54,634	0/0:16,0:16:45.14:0,45,539	0/0:71,0:71:99:0,196,2297	0/0:26,0:26:75.16:0,75,849	0/0:17,0:17:48.10:0,48,549	0/0:22,0:22:66.17:0,66,767	0/0:20,0:20:57.15:0,57,662	0/0:32,0:32:90.27:0,90,1070	0/0:15,0:15:45.14:0,45,540	0/0:9,0:9:18.05:0,18,216
chr10	97111289	.	GCA	G	1845.21	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.799;DP=691;FS=10.471;HRun=0;HaplotypeScore=96.3140;InbreedingCoeff=0.9981;MQ=63.51;MQ0=0;MQRankSum=-0.300;QD=28.83;ReadPosRankSum=3.113;VQSLOD=5.2808;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,47:47:90.30:1329,90,0	0/0:9,0:9:27.07:0,27,433	0/0:14,0:13:34.26:0,34,537	0/0:17,0:17:48.01:0,48,822	0/0:24,0:24:72.19:0,72,1235	0/0:23,0:23:66.21:0,66,1220	0/0:40,0:40:99:0,120,2282	0/0:19,0:19:42.48:0,42,665	0/0:23,0:23:66.21:0,66,1231	0/0:26,0:26:75.24:0,75,1340	0/0:17,0:18:48.14:0,48,872	0/0:36,0:36:99:0,108,2003	0/0:21,0:21:63.17:0,63,1106	0/0:34,0:34:98.40:0,98,1544	0/0:17,0:17:48.16:0,48,926	1/1:0,17:17:42.14:637,42,0	0/0:45,0:45:99:0,135,2532	0/0:33,0:33:96.25:0,96,1743	0/0:25,0:23:69.19:0,69,1193	0/0:12,0:12:33.11:0,33,615	0/0:51,0:50:99:0,150,2653	0/0:17,0:17:51.14:0,51,916	0/0:16,0:16:48.14:0,48,843	0/0:32,0:32:96.22:0,96,1647	0/0:21,0:21:54.18:0,54,1005	0/0:28,0:27:78.27:0,78,1499	0/0:17,0:17:51.14:0,51,880	0/0:9,0:9:24.07:0,24,316
chr10	97111398	.	C	CAT	988.25	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.246;DP=640;FS=2.014;HRun=0;HaplotypeScore=80.8797;InbreedingCoeff=0.9726;MQ=91.79;MQ0=0;MQRankSum=-2.448;QD=47.06;ReadPosRankSum=2.235;VQSLOD=5.0304;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,1983	0/0:6,0:6:18.06:0,18,294	0/0:24,0:24:63.14:0,63,943	0/0:28,0:28:81.23:0,81,1277	0/0:18,0:18:45.14:0,45,708	0/0:14,0:14:39.13:0,39,635	0/0:37,0:37:99:0,108,1723	0/0:17,0:17:45.15:0,45,723	0/0:17,0:17:48.16:0,48,775	0/0:17,0:17:48.16:0,48,758	0/0:8,0:8:21.07:0,21,339	0/0:35,0:35:99:0,99,1602	0/0:18,0:18:51.17:0,51,828	0/0:33,0:33:87.25:0,87,1335	0/0:22,0:22:66.23:0,66,1076	0/0:24,0:24:69.24:0,69,1119	0/0:34,0:33:99:0,102,1562	1/1:0,20:20:54.19:1083,54,0	0/0:24,0:24:63.17:0,63,997	0/0:16,0:16:39.12:0,39,605	0/0:48,0:47:99:0,132,2119	0/0:12,0:12:33.11:0,33,537	0/0:7,0:7:15.05:0,15,245	0/0:40,0:40:99:0,114,1801	0/0:17,0:17:48.16:0,48,782	0/0:17,0:17:48.16:0,48,781	0/0:18,0:18:54.18:0,54,880	0/0:24,0:24:69.19:0,69,1094
chr10	97112871	.	GGT	G	244.88	PASS	AB=0.913;AC=18;AF=0.375;AN=48;BaseQRankSum=5.866;DP=631;FS=0.000;HRun=0;HaplotypeScore=83.4216;InbreedingCoeff=0.0198;MQ=71.54;MQ0=12;MQRankSum=0.676;QD=0.81;ReadPosRankSum=2.287;VQSLOD=1.3332;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:48,0:53:19.89:98,20,0	0/1:9,1:10:20.10:20,0,93	./.	./.	0/1:15,1:16:14:14,0,199	0/1:16,0:17:2.14:2,0,81	1/1:19,0:23:8.52:42,9,0	./.	0/1:10,3:13:23.04:23,0,79	0/1:25,2:27:23.04:23,0,67	0/1:13,1:16:25.16:25,0,143	0/1:22,1:23:20.04:20,0,98	0/0:13,0:13:6.02:0,6,88	0/0:19,0:19:18.01:0,18,202	0/0:24,0:23:12.01:0,12,137	1/1:9,0:13:8.52:42,9,0	0/1:36,1:38:16.11:16,0,314	0/0:30,0:30:23.99:0,24,233	./.	0/0:15,0:15:6.02:0,6,88	0/0:40,0:39:3:0,3,25	0/1:19,3:22:14.02:14,0,183	0/0:10,0:10:18:0,18,201	0/0:34,0:33:27.05:0,27,339	0/1:20,2:21:46.08:46,0,120	0/0:32,0:32:30.08:0,30,384	0/0:18,0:17:9.92:0,10,131	1/1:10,0:11:3.31:15,3,0
chr10	97112920	.	G	GTGTT	80.52	PASS	AB=0.591;AC=1;AF=0.018;AN=56;BaseQRankSum=3.110;DP=577;FS=7.205;HRun=0;HaplotypeScore=107.7486;InbreedingCoeff=-0.0043;MQ=72.04;MQ0=7;MQRankSum=-1.647;QD=3.10;ReadPosRankSum=-1.331;VQSLOD=0.8470;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:92.77:0,93,840	0/0:11,0:11:16.46:0,16,260	0/0:45,0:28:80.82:0,81,767	0/0:45,0:23:65.89:0,66,620	0/0:16,0:16:47.89:0,48,537	0/0:11,0:11:26.96:0,27,267	0/0:21,0:21:53.60:0,54,456	0/0:20,0:19:53.81:0,54,447	0/0:18,0:18:43.92:0,44,419	0/0:18,0:18:46.42:0,46,434	0/0:20,0:20:40.89:0,41,437	0/0:13,0:13:35.87:0,36,336	0/0:18,0:18:50.87:0,51,471	0/0:12,0:12:31.18:0,31,307	0/0:12,0:11:29.97:0,30,311	0/0:12,0:12:23.70:0,24,278	0/0:26,0:26:61.76:0,62,692	0/1:8,17:26:21.20:155,0,21	0/0:13,0:13:38.93:0,39,325	0/0:12,0:12:30.85:0,31,301	0/0:28,0:28:71.72:0,72,561	0/0:23,0:23:62.95:0,63,646	0/0:18,0:17:27.05:0,27,420	0/0:32,0:32:82.98:0,83,858	0/0:19,0:19:50.91:0,51,505	0/0:23,0:23:49.72:0,50,644	0/0:19,0:19:53.63:0,54,467	0/0:9,0:9:26.68:0,27,215
chr10	97113083	.	C	CTTA	1530.10	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.997;DP=593;FS=7.259;HRun=0;HaplotypeScore=99.9302;InbreedingCoeff=0.9968;MQ=75.29;MQ0=0;MQRankSum=-1.398;QD=63.75;ReadPosRankSum=1.055;VQSLOD=5.3155;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,2199	0/0:9,0:9:27.09:0,27,503	0/0:15,0:14:28.30:0,28,345	0/0:20,0:19:38.62:0,39,555	0/0:11,0:11:33.11:0,33,615	0/0:18,0:18:51.17:0,51,944	0/0:29,0:29:78.27:0,78,1447	0/0:15,0:15:36.12:0,36,671	0/0:22,0:22:66.23:0,66,1230	0/0:26,0:26:78.27:0,78,1444	0/0:10,0:10:30.10:0,30,559	0/0:22,0:22:63.22:0,63,1171	0/0:28,0:28:78.27:0,78,1449	0/0:23,0:23:60.19:0,60,1081	0/0:24,0:24:72.25:0,72,1342	0/0:30,0:30:90.31:0,90,1677	0/0:35,0:35:99:0,105,1958	1/1:2,21:24:66.23:1625,66,0	0/0:12,0:12:36.12:0,36,670	0/0:17,0:17:48.13:0,48,857	0/0:33,0:33:93.30:0,93,1688	0/0:16,0:16:45.15:0,45,839	0/0:13,0:13:39.13:0,39,727	0/0:28,0:28:81.26:0,81,1478	0/0:19,0:19:54.12:0,54,968	0/0:24,0:24:66.23:0,66,1225	0/0:16,0:16:48.11:0,48,798	0/0:11,0:11:33.11:0,33,615
chr10	97114019	.	AG	A	2793.62	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=11.990;DP=708;FS=2.743;HRun=1;HaplotypeScore=74.4277;InbreedingCoeff=0.9803;MQ=73.29;MQ0=0;MQRankSum=0.098;QD=38.27;ReadPosRankSum=0.305;VQSLOD=4.2006;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,47:47:99:1866,135,0	0/0:16,0:16:45.15:0,45,714	0/0:7,0:7:18.01:0,18,243	0/0:19,0:18:42.10:0,42,569	0/0:18,0:18:54.18:0,54,863	0/0:22,0:22:66.21:0,66,1029	0/0:31,0:31:93.32:0,93,1484	0/0:21,0:21:63.21:0,63,1005	0/0:21,0:21:63.21:0,63,1003	0/0:30,0:30:90.30:0,90,1420	0/0:21,0:21:63.20:0,63,982	0/0:31,0:31:93.30:0,93,1459	0/0:22,0:22:66.23:0,66,1055	0/0:28,0:28:84.29:0,84,1343	0/0:24,0:24:72.23:0,72,1128	1/1:0,26:26:75.25:1049,75,0	0/0:30,0:30:90.31:0,90,1439	0/0:38,0:38:99:0,108,1699	0/0:27,0:27:78.26:0,78,1218	0/0:24,0:24:72.24:0,72,1138	0/0:45,0:45:99:0,132,2040	0/0:19,0:19:53.88:0,54,840	0/0:14,0:14:39.13:0,39,623	0/0:42,0:42:99:0,123,1938	0/0:33,0:33:99:0,99,1560	0/0:26,0:26:75.26:0,75,1196	0/0:22,0:22:66.19:0,66,1021	0/0:4,0:4:12.04:0,12,192
chr10	97115201	.	T	TC	5299.57	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-14.922;DP=746;FS=2.633;HRun=1;HaplotypeScore=67.3660;InbreedingCoeff=0.9999;MQ=90.75;MQ0=0;MQRankSum=-2.691;QD=42.06;ReadPosRankSum=-0.612;VQSLOD=5.0094;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:90.30:1349,90,0	0/0:11,0:11:33.11:0,33,428	0/0:37,0:37:99:0,108,1346	0/0:21,0:21:60.17:0,60,761	0/0:30,0:30:90.29:0,90,1168	0/0:12,0:12:36.12:0,36,467	0/0:28,0:28:84.27:0,84,1090	1/1:1,37:38:99:1613,111,0	0/0:25,0:25:72.23:0,72,934	0/0:33,0:33:96.31:0,96,1247	0/0:22,0:22:63.19:0,63,804	0/0:24,0:24:69.20:0,69,880	0/0:31,0:31:93.29:0,93,1189	0/0:32,0:32:96.28:0,96,1217	0/0:26,0:26:72.23:0,72,935	1/1:0,20:20:60.20:899,60,0	0/0:34,0:34:99:0,99,1268	1/1:1,21:22:60.20:899,60,0	0/0:18,0:18:51.17:0,51,661	0/0:27,0:27:75.23:0,75,959	0/0:35,0:35:99:0,102,1324	0/0:35,0:35:99:0,105,1349	0/0:27,0:27:81.26:0,81,1046	0/0:28,0:28:81.26:0,81,1050	0/0:26,0:26:72.23:0,72,935	0/0:31,0:31:90.28:0,90,1156	0/0:27,0:27:81.25:0,81,1037	1/1:0,13:13:36.12:540,36,0
chr10	97115685	.	A	AACACACACACACACACAC	3080.47	PASS	AB=0.682;AC=18;AF=0.333;AN=54;BaseQRankSum=1.129;DP=667;FS=6.108;HRun=0;HaplotypeScore=281.1380;InbreedingCoeff=0.3295;MQ=71.29;MQ0=9;MQRankSum=-4.651;QD=11.00;ReadPosRankSum=-4.742;VQSLOD=1.1390;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:21,4:33:3.01:252,3,0	0/0:12,0:13:21.07:0,21,897	1/1:36,0:19:0.47:1,0,0	./.	1/1:18,0:18:14.18:85,14,0	0/1:6,0:18:99:102,0,135	0/1:15,0:28:75.29:75,0,121	1/1:34,0:34:52.92:1607,53,0	0/0:9,0:22:6.02:0,6,131	0/0:22,0:22:39.05:0,39,1363	0/0:13,0:16:21.04:0,21,596	0/0:12,0:23:1.73:0,2,276	0/1:6,0:20:45.03:45,0,204	0/1:7,0:18:42.19:42,0,204	0/0:22,0:28:55.89:0,56,1673	0/0:25,0:26:32.31:0,32,1283	0/0:29,0:31:49.11:0,49,1955	1/1:7,0:17:12.04:743,12,0	0/0:21,0:22:14.92:0,15,1146	0/0:10,0:15:20.57:0,21,823	0/0:37,0:34:34.94:0,35,1465	0/0:17,0:30:14.79:0,15,217	0/0:8,0:21:14.81:0,15,229	0/1:10,0:30:65.51:66,0,424	0/0:24,0:25:48.05:0,48,1623	0/0:28,0:28:27.13:0,27,889	0/1:17,0:18:47.92:48,0,811	1/1:0,0:10:3.01:183,3,0
chr10	97117558	.	G	GC	4042.95	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.493;DP=719;FS=0.000;HRun=0;HaplotypeScore=78.9140;InbreedingCoeff=0.9985;MQ=77.59;MQ0=0;MQRankSum=-2.465;QD=42.11;ReadPosRankSum=-1.532;VQSLOD=3.4797;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,55:55:99:2373,160,0	0/0:12,0:12:36.12:0,36,496	0/0:29,0:29:87.15:0,87,1093	0/0:23,0:23:62.52:0,63,808	0/0:17,0:17:48.16:0,48,671	0/0:20,0:20:60.20:0,60,839	0/0:35,0:35:99:0,105,1448	1/1:0,32:32:96.28:1359,96,0	0/0:24,0:24:69.23:0,69,959	0/0:35,0:35:99:0,102,1406	0/0:16,0:16:48.15:0,48,645	0/0:16,0:16:48.16:0,48,670	0/0:28,0:28:81.23:0,81,1079	0/0:37,0:37:99:0,111,1550	0/0:27,0:27:75.25:0,75,1048	0/0:23,0:23:69.23:0,69,965	0/0:29,0:29:84.28:0,84,1175	0/0:25,0:25:72.20:0,72,955	0/0:20,0:20:57.19:0,57,797	0/0:23,0:23:63.21:0,63,879	0/0:39,0:39:99:0,114,1594	0/0:18,0:18:54.18:0,54,754	0/0:21,0:21:60.19:0,60,820	0/0:32,0:32:96.32:0,96,1342	0/0:26,0:26:78.25:0,78,1075	0/0:31,0:31:84.25:0,84,1125	0/0:17,0:17:51.17:0,51,708	1/1:0,9:9:21.07:311,21,0
chr10	97118650	.	C	CT	998.14	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.969;DP=603;FS=14.636;HRun=8;HaplotypeScore=66.2237;InbreedingCoeff=0.9929;MQ=85.21;MQ0=0;MQRankSum=-2.158;QD=15.60;ReadPosRankSum=-1.300;VQSLOD=1.9547;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:70.81:470,71,0	0/0:10,0:10:27.01:0,27,247	0/0:28,0:28:43.18:0,43,439	0/0:23,0:23:19.54:0,20,276	0/0:14,0:14:35.99:0,36,319	0/0:20,0:20:57:0,57,512	0/0:28,0:29:80.03:0,80,705	1/1:4,14:18:20.50:461,21,0	0/0:17,0:17:48.03:0,48,439	0/0:19,0:21:49.09:0,49,420	0/0:15,0:15:42.01:0,42,380	0/0:30,0:30:90.04:0,90,820	0/0:17,0:17:44.96:0,45,402	0/0:26,0:26:68.94:0,69,610	0/0:24,0:24:63.01:0,63,571	0/0:17,0:17:50.99:0,51,454	0/0:32,0:32:81.02:0,81,736	0/0:26,0:26:68.94:0,69,608	0/0:20,0:20:45.01:0,45,412	0/0:15,0:15:45.02:0,45,412	0/0:33,0:33:90:0,90,809	0/0:14,0:14:42.02:0,42,384	0/0:19,0:19:53.98:0,54,485	0/0:23,0:24:71.02:0,71,627	0/0:16,0:16:42.01:0,42,384	0/0:25,0:25:69.03:0,69,631	0/0:23,0:23:63.03:0,63,576	1/1:0,9:9:18.05:208,18,0
chr10	97118658	.	T	TC	1220.85	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-0.088;DP=610;FS=8.540;HRun=4;HaplotypeScore=66.5309;InbreedingCoeff=0.7721;MQ=86.18;MQ0=0;MQRankSum=-1.053;QD=17.69;ReadPosRankSum=0.840;VQSLOD=2.5774;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,38:41:93.29:1220,93,0	0/0:9,0:9:27.08:0,27,304	0/0:31,0:30:71.89:0,72,657	0/0:23,0:23:38.98:0,39,364	0/0:14,0:14:35.69:0,36,365	0/0:20,0:20:51.15:0,51,576	0/0:28,0:28:78.09:0,78,843	0/1:19,0:18:55.59:74,0,56	0/0:18,0:18:51.14:0,51,568	0/0:21,0:21:59.93:0,60,616	0/0:14,0:14:39.11:0,39,438	0/0:34,0:34:96.23:0,96,1053	0/0:16,0:16:45.11:0,45,496	0/0:25,0:25:60.16:0,60,670	0/0:25,0:25:72.14:0,72,769	0/0:19,0:19:48.10:0,48,522	0/0:31,0:31:84.22:0,84,932	0/0:26,0:26:63.15:0,63,699	0/0:16,0:16:48.11:0,48,530	0/0:17,0:17:51.13:0,51,560	0/0:31,0:31:81.23:0,81,915	0/0:15,0:15:45.11:0,45,493	0/0:19,0:19:51.15:0,51,576	0/0:25,0:25:72.07:0,72,775	0/0:16,0:16:47.39:0,47,493	0/0:25,0:25:72.19:0,72,805	0/0:23,0:23:69.17:0,69,760	1/1:9,0:9:15.09:54,15,0
chr10	97118791	.	TTG	T	914.90	PASS	AB=0.899;AC=23;AF=0.442;AN=52;BaseQRankSum=4.440;DP=570;FS=2.749;HRun=0;HaplotypeScore=86.1735;InbreedingCoeff=-0.3861;MQ=66.94;MQ0=9;MQRankSum=0.301;QD=2.13;ReadPosRankSum=0.366;VQSLOD=1.9276;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,1:40:25.34:25,0,222	0/1:13,1:15:14.93:15,0,184	./.	./.	0/1:8,0:11:20.55:21,0,162	0/1:15,3:18:45.29:45,0,171	0/1:23,3:26:42.04:42,0,246	0/0:20,0:28:9.30:0,9,59	0/1:8,3:13:52.22:52,0,158	0/1:21,0:21:6.15:6,0,270	0/1:7,3:10:18.05:18,0,108	0/1:19,3:22:11.98:12,0,249	0/0:5,0:11:7.61:0,8,92	0/1:16,2:19:31.77:32,0,278	0/1:21,1:23:36.07:36,0,370	1/1:10,5:16:11.86:113,12,0	0/1:29,4:33:99:122,0,479	1/1:17,0:21:5.05:37,5,0	0/0:9,0:9:5.85:0,6,59	1/1:11,4:18:20.72:189,21,0	0/1:34,3:37:99:155,0,380	0/0:11,0:10:18:0,18,224	0/0:11,0:9:9.03:0,9,133	0/1:30,5:35:68.16:68,0,655	0/1:15,0:15:35.95:36,0,328	0/1:21,2:22:37.27:37,0,240	0/1:11,1:12:9.04:9,0,145	0/0:8,0:10:2.75:0,3,19
chr10	97118836	.	C	CGT	648.15	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.721;DP=647;FS=10.424;HRun=0;HaplotypeScore=97.3144;InbreedingCoeff=0.8345;MQ=65.25;MQ0=16;MQRankSum=-2.652;QD=13.50;ReadPosRankSum=3.065;VQSLOD=3.0921;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,33:46:10.42:733,10,0	0/0:7,0:7:19.26:0,19,218	0/0:32,0:20:48.89:0,49,580	0/0:43,0:24:41.54:0,42,718	0/0:18,0:17:42.08:0,42,511	0/0:16,0:16:36.10:0,36,441	0/0:33,0:33:75.13:0,75,940	0/0:22,0:20:42.12:0,42,509	0/0:18,0:18:42.14:0,42,543	0/0:23,0:22:60.15:0,60,759	0/0:13,0:12:27.06:0,27,350	0/0:27,0:27:63.19:0,63,801	0/0:16,0:16:17.81:0,18,233	0/0:26,0:26:62.98:0,63,766	0/0:27,0:27:63.20:0,63,817	0/0:19,0:19:44.73:0,45,567	0/0:31,0:31:81.23:0,81,1031	0/0:19,0:18:34.12:0,34,401	0/0:13,0:13:30.07:0,30,360	0/0:18,0:18:39.11:0,39,491	0/0:50,0:50:99:0,105,1317	0/0:13,0:13:30.10:0,30,389	0/0:7,0:6:15.05:0,15,195	0/0:40,0:39:90.21:0,90,1129	0/0:22,0:22:45.05:0,45,541	0/0:28,0:28:66.17:0,66,839	0/0:16,0:16:42.13:0,42,535	0/0:2,0:2:6.02:0,6,78
chr10	97119120	.	C	CT	915.62	PASS	AB=0.967;AC=7;AF=0.125;AN=56;BaseQRankSum=-2.191;DP=576;FS=0.000;HRun=12;HaplotypeScore=72.0459;InbreedingCoeff=0.4958;MQ=67.09;MQ0=0;MQRankSum=-0.211;QD=7.38;ReadPosRankSum=0.098;VQSLOD=2.3348;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,30:46:81.39:913,81,0	0/0:13,0:13:32.81:0,33,241	0/0:13,0:12:12.50:0,12,68	0/0:12,0:10:0.27:0,0,20	0/0:18,0:21:30.51:0,31,206	0/1:23,0:23:28.41:28,0,274	0/1:16,2:18:6.94:7,0,241	1/1:21,0:27:4.51:69,5,0	0/0:12,0:12:29.78:0,30,217	0/0:21,0:21:44.68:0,45,327	0/0:11,0:11:26.80:0,27,195	0/0:17,0:19:37.77:0,38,268	0/0:24,0:24:32.44:0,32,368	0/0:19,0:19:50.62:0,51,365	0/0:23,0:23:44.58:0,45,325	0/0:13,0:13:25.06:0,25,178	0/0:30,0:31:64.52:0,65,463	0/0:19,0:20:52.72:0,53,375	0/0:28,1:29:20.76:0,21,304	0/0:17,2:19:6.50:0,6,205	0/0:15,0:15:32.76:0,33,237	0/0:20,0:20:38.71:0,39,280	0/0:22,0:22:41.54:0,42,295	0/0:31,0:31:71.48:0,71,524	0/0:13,0:13:23.77:0,24,175	0/0:25,0:25:52.69:0,53,378	0/0:24,0:26:52.94:0,53,385	0/1:7,0:10:0.77:29,0,1
chr10	97119122	.	T	TC	690.95	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=10.440;DP=581;FS=8.060;HRun=0;HaplotypeScore=74.0933;InbreedingCoeff=0.7799;MQ=70.02;MQ0=0;MQRankSum=-4.071;QD=8.43;ReadPosRankSum=0.858;VQSLOD=2.9449;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:45,0:45:8.89:9,0,207	0/0:13,0:13:39.11:0,39,510	0/0:16,0:15:9.04:0,9,211	0/0:13,0:11:26.98:0,27,266	0/0:22,0:22:60.88:0,61,624	0/0:25,0:25:54.76:0,55,720	0/0:17,0:17:45.23:0,45,591	1/1:18,9:27:72.73:599,73,0	0/0:12,0:12:36.10:0,36,468	0/0:21,0:21:60.17:0,60,766	0/0:12,0:12:30.09:0,30,392	0/0:18,0:18:51.11:0,51,622	0/0:24,0:24:70.74:0,71,879	0/0:20,0:20:57.17:0,57,754	0/0:23,0:23:69.11:0,69,821	0/0:13,0:13:38.67:0,39,445	0/0:30,0:30:90.20:0,90,1096	0/0:20,0:20:60.13:0,60,767	0/0:29,0:29:81.68:0,82,939	0/0:18,0:18:46.75:0,47,562	0/0:14,0:14:39.11:0,39,503	0/0:20,0:20:54.09:0,54,650	0/0:22,0:22:60.10:0,60,720	0/0:31,0:31:90.24:0,90,1148	0/0:15,0:15:39.09:0,39,467	0/0:25,0:25:72.17:0,72,889	0/0:26,0:26:71.68:0,72,873	1/1:7,3:10:27.87:210,28,0
chr10	97119124	.	T	TC	119.14	PASS	AB=0.955;AC=4;AF=0.071;AN=56;BaseQRankSum=9.945;DP=575;FS=5.158;HRun=0;HaplotypeScore=71.7768;InbreedingCoeff=0.3499;MQ=70.12;MQ0=0;MQRankSum=-1.820;QD=1.51;ReadPosRankSum=2.529;VQSLOD=0.8543;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:43:10.45:10,0,183	0/0:13,0:13:39.11:0,39,512	0/0:17,0:16:40.85:0,41,339	0/0:12,0:10:26.82:0,27,272	0/0:20,0:20:59.23:0,59,625	0/0:27,0:27:63.35:0,63,806	0/0:17,0:17:45.23:0,45,593	1/1:21,5:26:3.11:180,3,0	0/0:13,0:13:36.10:0,36,469	0/0:19,0:19:56.38:0,56,720	0/0:12,0:12:33.09:0,33,428	0/0:17,0:17:48.12:0,48,605	0/0:24,0:24:67.43:0,67,860	0/0:21,0:21:60.16:0,60,786	0/0:24,0:24:72.17:0,72,871	0/0:14,0:14:39.06:0,39,462	0/0:30,0:30:90.20:0,90,1110	0/0:19,0:19:57.16:0,57,758	0/0:27,0:27:75.78:0,76,912	0/0:18,0:18:49.75:0,50,597	0/0:14,0:14:42.11:0,42,538	0/0:19,0:19:54.08:0,54,657	0/0:21,0:21:63.10:0,63,755	0/0:31,0:31:90.24:0,90,1158	0/0:16,0:16:45.06:0,45,518	0/0:25,0:25:72.17:0,72,897	0/0:26,0:26:72.17:0,72,902	0/1:9,1:10:13.78:28,0,14
chr10	97119361	.	C	CAGGCTG	4980.39	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-1.223;DP=746;FS=2.518;HRun=0;HaplotypeScore=152.0942;InbreedingCoeff=0.9601;MQ=78.27;MQ0=0;MQRankSum=-11.381;QD=66.41;ReadPosRankSum=-1.689;VQSLOD=4.9289;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,32:42:75.26:2621,75,0	0/0:7,0:7:21.07:0,21,517	0/0:32,0:32:78.25:0,78,1898	0/0:22,0:23:66.19:0,66,1414	0/0:20,0:20:57.18:0,57,1339	0/0:27,0:27:78.27:0,78,1904	0/0:32,0:32:87.29:0,87,2070	1/1:10,15:26:69.24:2140,69,0	0/0:23,0:23:69.24:0,69,1646	0/0:31,0:31:90.30:0,90,2133	0/0:16,0:16:48.16:0,48,1177	0/0:31,0:31:90.24:0,90,2059	0/0:24,0:24:69.22:0,69,1625	0/0:32,0:32:96.32:0,96,2314	0/0:29,0:29:87.30:0,87,2120	0/0:25,0:25:72.25:0,72,1725	0/0:33,0:33:99:0,99,2414	0/0:31,0:31:90.31:0,90,2170	0/0:20,0:20:60.21:0,60,1449	0/0:30,0:30:87.28:0,87,2044	0/0:35,0:35:99:0,102,2460	0/0:17,0:17:48.16:0,48,1158	0/0:17,0:17:51.18:0,51,1228	0/0:33,0:33:99:0,99,2265	0/0:23,0:23:69.24:0,69,1665	0/0:42,0:42:99:0,123,2961	0/0:38,0:38:99:0,114,2744	1/1:0,5:7:6.02:219,6,0
chr10	97119447	.	G	GT	1586.52	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.137;DP=732;FS=0.603;HRun=1;HaplotypeScore=79.9847;InbreedingCoeff=0.9963;MQ=79.85;MQ0=0;MQRankSum=-6.514;QD=38.70;ReadPosRankSum=-2.792;VQSLOD=3.0760;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,141,1824	0/0:8,0:8:24.04:0,24,293	0/0:21,0:21:63.19:0,63,795	0/0:27,0:27:69.18:0,69,873	0/0:33,0:33:99:0,99,1270	0/0:25,0:25:75.21:0,75,943	0/0:31,0:31:90.29:0,90,1168	1/1:1,33:34:96.28:1393,96,0	0/0:20,0:20:54.18:0,54,701	0/0:24,0:24:72.23:0,72,934	0/0:11,0:11:27.07:0,27,334	0/0:37,0:37:99:0,111,1426	0/0:22,0:22:63.20:0,63,816	0/0:21,0:21:60.18:0,60,763	0/0:20,0:20:51.14:0,51,646	0/0:21,0:21:60.17:0,60,751	0/0:31,0:31:93.30:0,93,1207	0/0:25,0:25:72.23:0,72,934	0/0:19,0:19:57.18:0,57,727	0/0:20,0:20:57.17:0,57,724	0/0:49,0:50:99:0,147,1844	0/0:22,0:22:66.21:0,66,857	0/0:20,0:20:57.16:0,57,722	0/0:53,0:53:99:0,160,2062	0/0:29,0:29:87.24:0,87,1084	0/0:24,0:24:72.22:0,72,922	0/0:23,0:22:69.22:0,69,894	1/1:0,7:7:21.07:315,21,0
chr10	97119553	.	C	CTCTT	6480.04	PASS	AB=0.678;AC=31;AF=0.574;AN=54;BaseQRankSum=-5.993;DP=699;FS=1.539;HRun=0;HaplotypeScore=115.3705;InbreedingCoeff=0.8690;MQ=63.71;MQ0=4;MQRankSum=-0.909;QD=16.32;ReadPosRankSum=-1.189;VQSLOD=4.6006;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:30:32.97:533,33,0	0/0:12,0:12:27.06:0,27,392	1/1:15,0:9:0.47:1,0,0	./.	0/0:27,0:27:42.03:0,42,557	1/1:10,11:23:21.07:494,21,0	1/1:24,12:36:12.04:283,12,0	1/1:22,0:22:10.77:58,11,0	1/1:15,17:32:33.11:777,33,0	0/0:31,0:31:48.14:0,48,686	0/0:25,0:25:24.08:0,24,373	1/1:13,13:26:21.07:494,21,0	1/1:9,9:18:15.05:353,15,0	1/1:10,12:22:27.09:636,27,0	1/1:14,13:27:18.06:424,18,0	0/0:20,0:20:33.11:0,33,508	0/0:33,0:33:45.11:0,45,649	1/1:17,0:17:13.67:74,14,0	0/0:29,0:28:33.10:0,33,491	0/0:31,0:31:41.20:0,41,560	0/0:22,0:22:36.02:0,36,491	1/1:6,6:12:18.02:371,18,0	1/1:13,0:27:15.99:236,16,0	1/1:18,18:36:14.11:620,14,0	0/0:31,0:31:48.14:0,48,702	0/1:21,19:40:5.28:1124,0,5	0/0:29,0:29:45.07:0,45,606	1/1:14,0:14:0.94:2,1,0
chr10	97119595	.	CCTTT	C	158.38	PASS	AB=0.985;AC=8;AF=0.143;AN=56;BaseQRankSum=5.921;DP=639;FS=1.748;HRun=0;HaplotypeScore=121.7035;InbreedingCoeff=0.3721;MQ=62.65;MQ0=7;MQRankSum=-4.712;QD=1.15;ReadPosRankSum=-4.803;VQSLOD=0.7741;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,1:27:56.88:57,0,193	0/0:14,0:14:42.14:0,42,924	0/0:36,0:14:35.19:0,35,423	0/1:38,0:11:6.32:6,0,144	0/0:24,0:24:72.25:0,72,1728	0/0:19,0:19:42.14:0,42,762	0/0:24,0:24:40.21:0,40,921	1/1:25,6:30:10.34:107,10,0	0/0:24,0:24:57.20:0,57,1099	0/0:31,0:31:93.25:0,93,2129	0/0:14,0:14:42.14:0,42,955	0/0:26,0:26:60.21:0,60,1103	0/0:18,0:18:42.14:0,42,790	0/0:14,0:14:36.10:0,36,680	0/0:18,0:18:39.13:0,39,709	0/0:19,0:19:54.18:0,54,1232	0/0:24,0:24:72.25:0,72,1731	0/1:11,0:11:69.55:70,0,101	0/0:20,0:20:60.19:0,60,1380	0/0:27,0:27:81.25:0,81,1808	0/0:22,0:22:42.04:0,42,908	0/0:19,0:19:40.48:0,40,941	0/1:23,0:23:16.34:16,0,718	0/0:27,0:27:62.73:0,63,1164	0/0:24,0:24:72.22:0,72,1630	0/0:29,0:29:32.51:0,33,1482	0/0:28,0:28:78.22:0,78,1671	1/1:6,0:6:5.90:37,6,0
chr10	97119616	.	CTTCTTTCT	C	506.63	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=5.431;DP=642;FS=4.529;HRun=0;HaplotypeScore=161.0681;InbreedingCoeff=0.6652;MQ=61.34;MQ0=7;MQRankSum=-3.601;QD=20.27;ReadPosRankSum=0.398;VQSLOD=2.5363;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,19:24:27.09:600,27,0	0/0:10,0:11:24.07:0,24,726	0/0:37,0:14:2.37:0,2,40	0/0:42,0:13:3.01:0,3,39	0/0:30,0:30:66.23:0,66,2183	0/0:20,0:20:30.10:0,30,1151	0/0:22,0:22:51.17:0,51,1476	0/0:27,0:26:21.07:0,21,386	0/0:21,0:21:33.11:0,33,1149	0/0:31,0:31:69.23:0,69,2399	0/0:22,0:22:54.15:0,54,1963	0/0:27,0:27:66.23:0,66,2560	0/0:18,0:18:42.14:0,42,1441	0/0:13,0:13:21.07:0,21,803	0/0:17,0:17:33.11:0,33,1294	0/0:23,0:23:40.02:0,40,1521	0/0:22,0:22:45.15:0,45,1600	0/0:10,0:10:6.46:0,6,86	0/0:20,0:20:27.09:0,27,953	0/0:25,0:25:57.19:0,57,1874	0/0:6,0:21:20.54:0,21,557	0/0:23,0:23:60.21:0,60,2253	0/0:28,0:28:54.66:0,55,1891	0/0:25,0:25:21.64:0,22,1363	0/0:24,0:24:51.17:0,51,1891	0/0:25,0:25:51.17:0,51,1674	0/0:24,0:26:60.16:0,60,1817	./.
chr10	97119656	.	TTTCCTTCCTTCC	T	987.39	PASS	AB=0.565;AC=5;AF=0.093;AN=54;BaseQRankSum=7.678;DP=606;FS=13.280;HRun=0;HaplotypeScore=191.4960;InbreedingCoeff=0.7035;MQ=55.67;MQ0=4;MQRankSum=-5.827;QD=20.57;ReadPosRankSum=-1.642;VQSLOD=1.7724;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,7:16:26.52:536,27,0	0/0:9,0:9:27.05:0,27,856	0/0:26,0:8:20.99:0,21,565	0/0:7,0:2:6:0,6,186	0/0:30,0:30:78.25:0,78,3113	0/0:14,0:14:36.12:0,36,1438	0/0:20,0:20:39.12:0,39,1221	1/1:5,13:17:36.09:541,36,0	0/0:19,0:19:48.15:0,48,2148	0/0:31,0:30:72.23:0,72,3166	0/0:25,0:25:69.24:0,69,3273	0/0:35,0:35:90.21:0,90,3842	0/0:25,0:25:60.21:0,60,2706	0/0:13,0:13:36.11:0,36,1749	0/0:25,0:25:51.18:0,51,2233	0/0:28,0:28:67.47:0,67,2881	0/0:22,0:22:5.07:0,5,2260	0/1:3,0:13:38.87:39,0,97	0/0:16,0:12:30.10:0,30,1247	0/0:27,0:27:75.22:0,75,2518	0/0:22,0:22:33.11:0,33,1461	0/0:33,0:33:84.15:0,84,3326	0/0:25,0:25:69.20:0,69,3089	0/0:22,0:22:53.94:0,54,2021	0/0:30,0:30:78.27:0,78,3713	0/0:22,0:22:53.96:0,54,2373	0/0:31,0:31:78.21:0,78,3119	./.
chr10	97120048	.	TG	T	892.86	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.528;DP=678;FS=5.239;HRun=6;HaplotypeScore=68.0963;InbreedingCoeff=0.9830;MQ=94.00;MQ0=0;MQRankSum=-1.370;QD=27.06;ReadPosRankSum=-2.889;VQSLOD=3.0475;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1437	0/0:4,0:4:12.04:0,12,158	0/0:36,0:36:94.35:0,94,1116	0/0:25,0:25:33.58:0,34,672	0/0:27,0:27:78.19:0,78,977	0/0:19,0:19:51.15:0,51,656	0/0:14,0:14:36.10:0,36,445	1/1:0,25:25:72.15:756,72,0	0/0:19,0:19:51.14:0,51,643	0/0:31,0:31:78.23:0,78,974	0/0:30,0:30:81.19:0,81,1031	0/0:19,0:19:51.14:0,51,643	0/0:28,0:28:78.23:0,78,996	0/0:21,0:21:63.17:0,63,786	0/0:27,0:27:81.25:0,81,1051	0/0:16,0:16:45.15:0,45,592	0/0:25,0:25:72.23:0,72,936	0/0:17,0:17:48.11:0,48,598	0/0:11,0:11:33.06:0,33,403	0/0:30,0:30:84.25:0,84,1074	0/0:38,0:38:99:0,99,1272	0/0:34,0:34:90.28:0,90,1167	0/0:17,0:17:42.14:0,42,553	0/0:39,0:39:99:0,111,1417	0/0:20,0:20:57.18:0,57,731	0/0:41,0:41:99:0,114,1457	0/0:18,0:18:51.16:0,51,657	1/1:0,8:8:24.06:258,24,0
chr10	97120658	.	A	ACAGGGTGT	2778.09	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.568;DP=526;FS=1.772;HRun=0;HaplotypeScore=133.2853;InbreedingCoeff=0.9759;MQ=83.19;MQ0=1;MQRankSum=-8.409;QD=54.47;ReadPosRankSum=-2.340;VQSLOD=3.4111;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,21:29:60.12:2310,60,0	0/0:12,0:12:33.08:0,33,824	0/0:20,0:19:54.19:0,54,1535	0/0:24,0:24:59.88:0,60,1592	0/0:16,0:15:45.15:0,45,1235	0/0:10,0:10:30.09:0,30,791	0/0:33,0:33:93.30:0,93,2567	1/1:10,0:17:20.94:327,21,0	0/0:20,0:20:57.18:0,57,1503	0/0:20,0:20:51.18:0,51,1400	0/0:11,0:10:24.08:0,24,644	0/0:16,0:16:48.16:0,48,1367	0/0:24,0:24:72.19:0,72,1926	0/0:14,0:14:42.13:0,42,1118	0/0:21,0:21:63.22:0,63,1784	0/0:22,0:22:63.19:0,63,1685	0/0:32,0:32:90.29:0,90,2476	0/0:20,0:20:57.16:0,57,1494	0/0:15,0:15:42.14:0,42,1141	0/0:10,0:10:30.08:0,30,780	0/0:17,0:17:48.12:0,48,1277	0/0:23,0:23:66.23:0,66,1804	0/0:14,0:14:36.12:0,36,971	0/0:33,0:32:96.33:0,96,2653	0/0:11,0:11:30.10:0,30,792	0/0:18,0:18:54.19:0,54,1537	0/0:19,0:18:51.01:0,51,1426	1/1:3,0:5:9.03:278,9,0
chr10	97120748	.	TTGAGAAAC	T	1114.75	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.000;DP=387;FS=3.116;HRun=0;HaplotypeScore=104.3529;InbreedingCoeff=0.9747;MQ=81.29;MQ0=4;MQRankSum=-5.313;QD=55.74;ReadPosRankSum=-1.235;VQSLOD=3.1244;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.18:0,51,1979	0/0:5,0:5:15.05:0,15,618	0/0:20,0:17:48.26:0,48,1465	0/0:11,0:10:24.07:0,24,640	0/0:16,0:16:45.13:0,45,1725	0/0:7,0:7:21.07:0,21,839	0/0:17,0:17:45.63:0,46,1754	1/1:1,13:14:39.11:828,39,0	0/0:10,0:10:27.08:0,27,997	0/0:22,0:22:63.21:0,63,2518	0/0:15,0:15:45.15:0,45,1797	0/0:8,0:8:21.07:0,21,863	0/0:22,0:22:66.23:0,66,2522	0/0:12,0:12:33.11:0,33,1295	0/0:16,0:16:48.16:0,48,1935	0/0:7,0:7:21.07:0,21,862	0/0:16,0:16:45.15:0,45,1837	0/0:15,0:13:36.12:0,36,1227	0/0:10,0:10:30.10:0,30,1212	0/0:19,0:19:54.15:0,54,2085	0/0:14,0:13:39.13:0,39,1616	0/0:11,0:11:27.09:0,27,1029	0/0:16,0:16:48.16:0,48,1813	0/0:19,0:19:57.15:0,57,2196	0/0:14,0:14:33.11:0,33,1340	0/0:15,0:15:45.15:0,45,1810	0/0:11,0:11:33.11:0,33,1359	1/1:1,5:6:15.05:405,15,0
chr10	97120764	.	T	TTA	646.55	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=1.175;DP=326;FS=19.227;HRun=0;HaplotypeScore=50.4251;InbreedingCoeff=0.5999;MQ=70.18;MQ0=8;MQRankSum=-0.275;QD=24.87;ReadPosRankSum=0.124;VQSLOD=2.1592;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:18:30.23:739,30,0	0/0:5,0:5:12.03:0,12,155	0/0:11,0:8:13.82:0,14,149	0/1:8,0:7:8.37:8,0,72	0/0:15,0:15:42.13:0,42,570	0/0:5,0:5:15.04:0,15,197	0/0:16,0:16:38.64:0,39,485	0/0:14,0:13:32.35:0,32,278	0/0:8,0:8:24.04:0,24,309	0/0:19,0:19:54.13:0,54,690	0/0:12,0:12:36.01:0,36,476	0/0:7,0:7:21.07:0,21,299	0/0:15,0:15:45.15:0,45,611	0/0:8,0:8:24.06:0,24,290	0/0:14,0:13:36.08:0,36,489	0/0:6,0:6:18.06:0,18,256	0/0:13,0:13:36.08:0,36,463	0/0:11,0:9:8.57:0,9,33	0/0:12,0:12:33.01:0,33,420	0/0:18,0:18:54.15:0,54,746	0/0:18,0:14:36.10:0,36,473	0/0:7,0:7:18.06:0,18,255	0/0:13,0:13:39.09:0,39,532	0/0:15,0:15:44.71:0,45,572	0/0:8,0:8:24.04:0,24,309	0/0:14,0:14:39.13:0,39,555	0/0:9,0:9:27.06:0,27,363	0/0:7,0:7:15.03:0,15,151
chr10	97122085	.	A	AGCCC	1678.33	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.927;DP=594;FS=4.595;HRun=0;HaplotypeScore=106.0512;InbreedingCoeff=0.9826;MQ=80.39;MQ0=0;MQRankSum=-5.429;QD=55.94;ReadPosRankSum=-3.380;VQSLOD=4.0849;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,147,2846	0/0:8,0:8:24.08:0,24,502	0/0:15,0:15:39.07:0,39,710	0/0:22,0:22:52.72:0,53,848	0/0:28,0:28:81.26:0,81,1649	0/0:27,0:27:81.26:0,81,1645	0/0:17,0:17:51.17:0,51,1012	1/1:6,14:26:78.25:1579,78,0	0/0:27,0:27:81.28:0,81,1696	0/0:30,0:30:90.29:0,90,1811	0/0:15,0:15:44.94:0,45,891	0/0:11,0:11:33.11:0,33,673	0/0:13,0:13:39.13:0,39,817	0/0:12,0:12:36.11:0,36,715	0/0:21,0:21:60.14:0,60,1197	0/0:23,0:23:66.23:0,66,1369	0/0:28,0:28:84.24:0,84,1681	0/0:17,0:17:51.17:0,51,1044	0/0:24,0:24:69.21:0,69,1318	0/0:31,0:31:93.32:0,93,1948	0/0:21,0:21:63.19:0,63,1242	0/0:17,0:17:51.18:0,51,1068	0/0:16,0:16:48.14:0,48,964	0/0:22,0:22:63.19:0,63,1279	0/0:15,0:15:45.15:0,45,943	0/0:28,0:28:84.28:0,84,1725	0/0:25,0:25:69.24:0,69,1427	1/1:3,1:4:12.04:216,12,0
chr10	97122086	.	T	TGCC	1193.74	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.460;DP=598;FS=4.611;HRun=0;HaplotypeScore=97.6483;InbreedingCoeff=0.9894;MQ=80.82;MQ0=0;MQRankSum=-6.486;QD=36.17;ReadPosRankSum=-2.929;VQSLOD=3.7190;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,2530	0/0:8,0:8:24.08:0,24,447	0/0:16,0:16:44.99:0,45,680	0/0:22,0:22:44.22:0,44,766	0/0:29,0:29:78.27:0,78,1452	0/0:27,0:27:81.28:0,81,1496	0/0:17,0:17:51.17:0,51,917	1/1:14,14:28:62.46:1110,62,0	0/0:27,0:27:81.28:0,81,1510	0/0:28,0:28:84.29:0,84,1566	0/0:15,0:15:45.14:0,45,806	0/0:11,0:11:33.11:0,33,614	0/0:14,0:14:39.13:0,39,727	0/0:13,0:13:33.11:0,33,615	0/0:22,0:22:63.16:0,63,1098	0/0:22,0:22:66.23:0,66,1223	0/0:28,0:28:84.25:0,84,1502	0/0:17,0:17:51.17:0,51,938	0/0:25,0:25:72.20:0,72,1214	0/0:31,0:31:93.32:0,93,1733	0/0:21,0:21:63.21:0,63,1135	0/0:17,0:17:51.17:0,51,949	0/0:16,0:16:48.14:0,48,861	0/0:22,0:22:63.20:0,63,1142	0/0:15,0:15:45.15:0,45,839	0/0:28,0:28:84.29:0,84,1562	0/0:25,0:25:69.24:0,69,1276	1/1:4,1:5:14.53:202,15,0
chr10	97122978	.	AG	A	694.32	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.316;DP=653;FS=5.512;HRun=3;HaplotypeScore=64.0682;InbreedingCoeff=0.9681;MQ=79.04;MQ0=0;MQRankSum=-3.126;QD=26.70;ReadPosRankSum=-2.813;VQSLOD=2.0506;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1579	0/0:9,0:9:27.09:0,27,387	0/0:14,0:14:36.10:0,36,472	0/0:16,0:16:37.01:0,37,476	0/0:24,0:24:72.23:0,72,1017	0/0:16,0:16:48.15:0,48,673	0/0:35,0:35:99:0,99,1408	1/1:3,20:23:57.17:697,57,0	0/0:18,0:18:51.17:0,51,733	0/0:25,0:25:72.22:0,72,989	0/0:14,0:14:42.13:0,42,586	0/0:25,0:25:72.24:0,72,1033	0/0:27,0:27:81.24:0,81,1141	0/0:30,0:30:90.30:0,90,1282	0/0:23,0:23:63.20:0,63,889	0/0:20,0:20:54.18:0,54,778	0/0:30,0:30:84.28:0,84,1209	0/0:28,0:28:84.21:0,84,1147	0/0:21,0:21:57.18:0,57,803	0/0:13,0:13:39.12:0,39,544	0/0:61,0:61:99:0,181,2452	0/0:26,0:26:72.21:0,72,998	0/0:22,0:22:66.22:0,66,949	0/0:31,0:31:90.30:0,90,1284	0/0:10,0:10:27.09:0,27,389	0/0:29,0:29:84.28:0,84,1194	0/0:21,0:21:63.21:0,63,906	1/1:0,3:3:9.03:112,9,0
chr10	97123301	.	ATTAGGC	A	1231.98	PASS	AB=0.529;AC=1;AF=0.018;AN=56;BaseQRankSum=6.294;DP=672;FS=1.868;HRun=0;HaplotypeScore=137.8149;InbreedingCoeff=-0.0181;MQ=94.79;MQ0=0;MQRankSum=-7.544;QD=45.63;ReadPosRankSum=1.530;VQSLOD=3.7065;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,108,3737	0/0:12,0:12:36.12:0,36,1196	0/0:35,0:35:78.15:0,78,2324	0/0:30,0:29:72.22:0,72,2193	0/0:22,0:22:54.19:0,54,1852	0/0:20,0:20:60.18:0,60,1859	0/0:23,0:23:57.20:0,57,1929	0/0:22,0:22:66.21:0,66,2142	0/0:24,0:24:69.24:0,69,2405	0/0:24,0:24:72.24:0,72,2284	0/0:20,0:20:60.21:0,60,2088	0/0:27,0:27:78.27:0,78,2663	0/0:17,0:17:48.16:0,48,1630	0/0:24,0:24:69.22:0,69,2271	0/0:25,0:25:72.22:0,72,2319	0/1:3,24:27:41.39:1306,0,41	0/0:32,0:32:87.30:0,87,3033	0/0:23,0:23:66.23:0,66,2299	0/0:30,0:30:87.29:0,87,2859	0/0:19,0:19:54.19:0,54,1880	0/0:33,0:33:93.32:0,93,3230	0/0:14,0:14:42.14:0,42,1369	0/0:20,0:20:57.20:0,57,1987	0/0:25,0:25:72.25:0,72,2454	0/0:15,0:15:39.13:0,39,1341	0/0:24,0:24:69.23:0,69,2277	0/0:30,0:30:84.24:0,84,2613	0/0:11,0:11:30.10:0,30,963
chr10	97123431	.	AATCTG	A	1782.48	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.480;DP=630;FS=34.905;HRun=0;HaplotypeScore=124.3118;InbreedingCoeff=0.9998;MQ=82.52;MQ0=0;MQRankSum=-7.983;QD=57.50;ReadPosRankSum=-1.508;VQSLOD=1.8073;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,4199	0/0:14,0:14:42.14:0,42,1357	0/0:18,0:18:54.10:0,54,1534	0/0:24,0:22:63.21:0,63,1742	0/0:24,0:24:72.25:0,72,2309	0/0:27,0:27:81.28:0,81,2546	0/0:14,0:14:42.14:0,42,1357	1/1:4,16:20:60.14:1172,60,0	0/0:20,0:20:60.17:0,60,1742	0/0:31,0:31:93.31:0,93,2851	0/0:16,0:16:39.13:0,39,1260	0/0:23,0:23:69.22:0,69,2097	0/0:25,0:25:75.26:0,75,2361	0/0:23,0:23:63.19:0,63,1892	0/0:19,0:19:54.17:0,54,1634	0/0:22,0:22:66.23:0,66,2067	0/0:19,0:19:57.20:0,57,1792	0/0:22,0:22:63.20:0,63,1960	0/0:22,0:22:63.19:0,63,1886	0/0:21,0:21:63.22:0,63,2029	0/0:21,0:21:60.18:0,60,1843	0/0:19,0:19:54.17:0,54,1616	0/0:20,0:20:60.19:0,60,1866	0/0:29,0:29:84.29:0,84,2693	0/0:16,0:16:48.16:0,48,1551	0/0:28,0:28:84.28:0,84,2530	0/0:36,0:35:99:0,105,3311	1/1:0,11:11:33.11:732,33,0
chr10	97123445	.	G	GAA	3419.43	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=0.941;DP=648;FS=21.690;HRun=9;HaplotypeScore=84.6314;InbreedingCoeff=0.9950;MQ=80.02;MQ0=0;MQRankSum=-1.750;QD=30.00;ReadPosRankSum=-1.612;VQSLOD=1.9560;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:46:99:1856,128,0	0/0:16,0:16:42.07:0,42,439	0/0:19,0:19:14.58:0,15,278	0/0:20,0:18:33.02:0,33,346	0/0:22,0:22:60.13:0,60,639	0/0:28,0:28:69.13:0,69,726	0/0:15,0:15:42.09:0,42,439	1/1:7,16:27:59.16:811,59,0	0/0:22,0:22:51.08:0,51,543	0/0:33,0:33:81.17:0,81,850	0/0:17,0:17:45.08:0,45,479	0/0:24,0:24:60.11:0,60,630	0/0:26,0:26:69.17:0,69,734	0/0:24,0:24:66.16:0,66,702	0/0:18,0:18:51.13:0,51,543	0/0:24,0:24:54.11:0,54,575	0/0:18,0:18:48.11:0,48,511	1/1:4,0:26:44.92:154,45,0	0/0:21,0:21:57.04:0,57,592	0/0:20,0:21:50.85:0,51,523	0/0:17,0:17:48.10:0,48,502	0/0:18,0:18:45.10:0,45,479	0/0:24,0:24:57.08:0,57,598	0/0:23,0:24:57.08:0,57,662	0/0:18,0:18:48.11:0,48,511	0/0:27,0:27:72.18:0,72,766	0/0:38,0:37:93.20:0,93,989	1/1:2,13:15:39.13:599,39,0
chr10	97125165	.	T	TC	594.50	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=5.577;DP=293;FS=18.491;HRun=0;HaplotypeScore=48.1406;InbreedingCoeff=0.5100;MQ=62.24;MQ0=3;MQRankSum=-7.040;QD=16.07;ReadPosRankSum=0.188;VQSLOD=3.6485;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:38.98:0,39,449	0/0:5,0:5:12.03:0,12,152	0/0:20,0:12:13.40:0,13,228	0/0:27,0:13:15.85:0,16,152	0/0:13,0:13:36.11:0,36,484	0/0:11,0:11:27.04:0,27,351	0/0:2,0:2:6.01:0,6,68	1/1:15,0:15:44.20:333,44,0	0/0:7,0:7:21.04:0,21,246	0/0:6,0:6:15.02:0,15,177	0/0:12,0:12:36.11:0,36,473	0/0:5,0:5:15.03:0,15,178	0/0:3,0:3:9.02:0,9,110	0/0:2,0:2:6.02:0,6,84	0/0:6,0:6:18.05:0,18,236	0/0:3,0:3:9.02:0,9,97	0/0:28,0:28:84.14:0,84,1104	1/1:2,11:13:1.07:335,1,0	0/0:20,0:19:57.13:0,57,688	0/0:14,0:14:42.10:0,42,520	0/0:3,0:3:9.03:0,9,124	0/0:6,0:6:18.02:0,18,178	0/0:5,0:5:15.05:0,15,207	0/0:5,0:5:15.05:0,15,208	0/0:15,0:15:45.14:0,45,602	0/0:12,0:12:36.08:0,36,439	0/0:13,0:13:39.12:0,39,521	0/1:9,0:9:42.40:42,0,70
chr10	97125174	.	AT	A	393.44	PASS	AB=0.929;AC=7;AF=0.125;AN=56;BaseQRankSum=8.417;DP=292;FS=5.428;HRun=1;HaplotypeScore=52.0857;InbreedingCoeff=0.6059;MQ=66.16;MQ0=4;MQRankSum=-7.833;QD=8.94;ReadPosRankSum=0.512;VQSLOD=1.0654;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:28.62:0,29,369	0/0:4,0:4:11.95:0,12,139	0/0:23,0:10:1.32:0,1,184	0/0:47,2:23:22.58:0,23,214	0/0:13,0:13:36.10:0,36,470	0/1:12,1:13:3.87:4,0,357	0/0:1,0:1:2.99:0,3,24	1/1:2,6:8:23.88:239,24,0	0/0:6,0:6:18.01:0,18,193	0/0:5,0:5:15.02:0,15,173	0/0:10,0:10:30.10:0,30,408	0/0:4,0:4:12.02:0,12,145	0/0:2,0:2:6.02:0,6,82	0/0:2,0:2:6.02:0,6,82	0/0:5,0:5:15.05:0,15,201	0/0:1,0:1:3.01:0,3,41	0/0:25,0:25:75.22:0,75,1001	1/1:10,0:14:17.60:167,18,0	0/0:22,0:21:56.99:0,57,679	0/0:10,0:10:30.10:0,30,408	0/0:3,0:3:9.01:0,9,105	0/0:1,0:1:3:0,3,25	0/0:5,0:5:15.03:0,15,187	0/0:5,0:5:15.05:0,15,204	0/0:18,0:18:54.08:0,54,620	0/0:8,0:8:24.08:0,24,317	0/0:13,0:13:39.12:0,39,514	1/1:8,1:9:19.19:122,19,0
chr10	97125183	.	AAT	A	193.10	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=8.253;DP=316;FS=8.683;HRun=0;HaplotypeScore=63.9653;InbreedingCoeff=0.5647;MQ=68.61;MQ0=7;MQRankSum=-6.176;QD=1.87;ReadPosRankSum=-0.734;VQSLOD=0.4866;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:27.04:0,27,375	0/0:6,0:6:18.02:0,18,249	0/0:36,0:14:7.41:0,7,184	0/1:70,0:30:28.42:28,0,166	0/0:16,0:16:39.07:0,39,609	0/0:12,0:12:10.30:0,10,459	0/0:1,0:1:3.01:0,3,51	1/1:4,4:7:9.33:130,9,0	0/0:6,0:6:18.06:0,18,308	0/0:5,0:5:15.05:0,15,254	0/0:10,0:10:30.06:0,30,427	0/0:4,0:4:12.03:0,12,164	0/0:3,0:3:9.01:0,9,113	0/0:3,0:3:5.94:0,6,70	0/0:3,0:3:9.03:0,9,156	0/0:2,0:2:5.95:0,6,44	0/0:22,0:22:66.20:0,66,1091	1/1:14,0:14:9.08:57,9,0	0/0:23,0:22:60.18:0,60,973	0/0:8,0:8:24.07:0,24,377	0/0:2,0:2:6.02:0,6,103	0/0:2,0:2:6.01:0,6,76	0/0:3,0:3:9.02:0,9,116	0/0:5,0:5:12.04:0,12,200	0/0:15,0:15:45.12:0,45,714	0/0:4,0:4:9.02:0,9,156	0/0:11,0:11:33.07:0,33,508	1/1:10,0:10:25.90:114,26,0
chr10	97125195	.	AAT	A	278.25	PASS	AB=0.984;AC=7;AF=0.125;AN=56;BaseQRankSum=8.056;DP=339;FS=1.618;HRun=0;HaplotypeScore=64.2909;InbreedingCoeff=0.5435;MQ=68.79;MQ0=10;MQRankSum=-5.554;QD=3.16;ReadPosRankSum=-0.315;VQSLOD=1.7826;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:15.15:0,15,65	0/0:5,0:5:15.05:0,15,241	0/1:62,1:22:16.68:17,0,349	0/0:98,0:36:8.80:0,9,277	0/0:13,0:13:39.12:0,39,591	0/0:10,0:10:27.09:0,27,418	0/0:1,0:1:3.01:0,3,49	1/1:8,0:7:4.95:36,5,0	0/0:6,0:6:18.06:0,18,293	0/0:9,0:9:24.05:0,24,343	0/0:6,0:6:15.04:0,15,244	0/0:3,0:3:5.99:0,6,74	0/0:4,0:4:12.02:0,12,159	0/0:2,0:2:6.01:0,6,73	0/0:4,0:4:12.02:0,12,146	0/0:1,0:1:3.01:0,3,48	0/0:19,0:19:54.07:0,54,820	1/1:8,0:8:12.72:72,13,0	0/0:20,0:19:57.02:0,57,820	0/0:5,0:5:15.05:0,15,244	0/0:2,0:2:6:0,6,73	0/0:2,0:2:6.02:0,6,98	0/0:3,0:3:9.03:0,9,144	0/0:3,0:3:9.03:0,9,144	0/0:14,0:14:42.14:0,42,680	0/0:5,0:5:14.08:0,14,197	0/0:8,0:8:24.05:0,24,340	1/1:1,8:9:27.05:288,27,0
chr10	97125197	.	TA	T	77.91	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.441;DP=345;FS=17.203;HRun=9;HaplotypeScore=61.3184;InbreedingCoeff=0.4261;MQ=67.99;MQ0=11;MQRankSum=-2.450;QD=4.58;ReadPosRankSum=-0.341;VQSLOD=-0.0155;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,4:8:1.15:141,1,0	0/0:5,0:5:15.04:0,15,173	0/0:63,0:22:11.39:0,11,289	0/0:103,2:38:17.71:0,18,271	0/0:13,0:13:36.11:0,36,415	0/0:11,0:11:30.03:0,30,321	0/0:1,0:1:3.01:0,3,35	0/0:7,0:6:5.40:0,5,26	0/0:6,0:6:18.05:0,18,208	0/0:8,0:8:24.07:0,24,277	0/0:5,0:5:15.04:0,15,173	0/0:2,0:2:6.02:0,6,69	0/0:4,0:4:9.03:0,9,104	0/0:2,0:2:3.01:0,3,35	0/0:4,0:4:6.90:0,7,71	0/0:1,0:1:3.01:0,3,35	0/0:18,0:18:48.14:0,48,554	0/0:8,0:8:18.14:0,18,63	0/0:20,0:19:51.13:0,51,574	0/0:5,0:5:15.04:0,15,173	0/0:2,0:2:3.01:0,3,35	0/0:2,0:2:6.02:0,6,69	0/0:3,0:3:9.03:0,9,104	0/0:3,0:3:9.02:0,9,101	0/0:14,0:14:42.12:0,42,484	0/0:5,0:5:14.99:0,15,158	0/0:8,0:8:18.05:0,18,208	1/1:9,0:9:14.22:37,14,0
chr10	97125199	.	A	ACCCCCCC	2372.91	PASS	AB=0.917;AC=6;AF=0.107;AN=56;BaseQRankSum=7.659;DP=364;FS=3.728;HRun=0;HaplotypeScore=85.5624;InbreedingCoeff=0.4084;MQ=70.38;MQ0=11;MQRankSum=-5.748;QD=60.84;ReadPosRankSum=2.091;VQSLOD=3.2668;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:10:99:256,0,232	0/0:5,0:5:15.05:0,15,405	0/0:71,0:24:32.48:0,32,838	0/0:111,0:39:53.96:0,54,651	0/0:14,0:14:39.13:0,39,1022	0/0:11,0:11:30.10:0,30,775	0/0:1,0:1:3.01:0,3,81	0/1:11,0:10:79.61:483,0,80	0/0:6,0:6:18.06:0,18,485	0/0:8,0:8:24.08:0,24,647	0/0:5,0:5:15.05:0,15,405	0/0:2,0:2:6.02:0,6,162	0/0:4,0:4:12.04:0,12,320	0/0:2,0:2:6.02:0,6,150	0/0:4,0:4:12.04:0,12,313	0/0:1,0:1:3.01:0,3,81	0/0:18,0:18:54.19:0,54,1417	1/1:8,0:8:24.08:733,24,0	0/0:18,0:18:54.19:0,54,1390	0/0:5,0:5:15.05:0,15,405	0/0:1,0:1:3.01:0,3,81	0/0:2,0:2:6.02:0,6,162	0/0:3,0:3:9.03:0,9,243	0/0:3,0:3:9.03:0,9,243	0/0:14,0:14:42.14:0,42,1133	0/0:5,0:5:15.05:0,15,355	0/0:11,0:11:24.08:0,24,604	1/1:1,9:10:30.10:1034,30,0
chr10	97125200	.	A	ACCCCCCCC	2362.55	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=7.514;DP=369;FS=0.761;HRun=0;HaplotypeScore=92.4882;InbreedingCoeff=0.4085;MQ=70.11;MQ0=12;MQRankSum=-5.584;QD=57.62;ReadPosRankSum=2.563;VQSLOD=3.6200;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:10:99:213,0,263	0/0:5,0:5:15.05:0,15,434	0/0:70,0:24:31.08:0,31,962	0/0:111,0:39:52.40:0,52,721	0/0:14,0:14:42.12:0,42,1093	0/0:11,0:11:30.10:0,30,844	0/0:1,0:1:3.01:0,3,87	0/1:11,0:10:70.82:390,0,71	0/0:6,0:6:18.06:0,18,521	0/0:8,0:8:24.08:0,24,695	0/0:6,0:6:15.05:0,15,435	0/0:2,0:2:6.02:0,6,174	0/0:5,0:5:12.04:0,12,345	0/0:2,0:2:6.02:0,6,137	0/0:4,0:4:12.04:0,12,321	0/0:1,0:1:3.01:0,3,87	0/0:18,0:18:54.16:0,54,1475	1/1:3,7:10:23.34:1064,23,0	0/0:17,0:17:51.16:0,51,1416	0/0:5,0:5:15.05:0,15,434	0/0:1,0:1:3.01:0,3,87	0/0:2,0:2:6.02:0,6,174	0/0:3,0:3:9.03:0,9,261	0/0:3,0:3:9.03:0,9,261	0/0:14,0:14:42.14:0,42,1217	0/0:6,0:6:15.01:0,15,368	0/0:11,0:11:33.06:0,33,670	1/1:10,0:10:30.10:829,30,0
chr10	97125236	.	TTA	T	60.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.610;DP=321;FS=7.706;HRun=0;HaplotypeScore=57.9765;InbreedingCoeff=0.5037;MQ=80.53;MQ0=13;MQRankSum=-4.275;QD=10.08;ReadPosRankSum=-2.413;VQSLOD=1.4554;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,5:6:14.91:148,15,0	0/0:5,0:5:15.02:0,15,256	0/0:48,0:22:43.51:0,44,404	0/0:65,0:20:20.19:0,20,126	0/0:13,0:13:39.10:0,39,693	0/0:11,0:11:33.10:0,33,612	0/0:3,0:3:9.03:0,9,175	0/0:21,0:21:40.17:0,40,438	0/0:7,0:7:21.06:0,21,378	0/0:6,0:6:18.05:0,18,321	0/0:8,0:8:24.08:0,24,445	0/0:3,0:3:9.02:0,9,142	0/0:5,0:5:14.53:0,15,211	0/0:5,0:5:15.05:0,15,293	0/0:2,0:2:6.02:0,6,117	0/0:5,0:5:15.05:0,15,293	0/0:20,0:20:36.01:0,36,739	0/0:15,0:15:39.08:0,39,685	0/0:21,0:20:59.53:0,60,1028	0/0:3,0:3:9.01:0,9,112	0/0:2,0:2:6.02:0,6,117	0/0:2,0:2:6.02:0,6,117	0/0:2,0:2:6.02:0,6,117	0/0:1,0:1:3.01:0,3,59	0/0:14,0:14:42.14:0,42,822	0/0:7,0:7:21.07:0,21,408	0/0:7,0:7:21.07:0,21,411	0/0:11,0:10:27.90:0,28,251
chr10	97127981	.	AC	A	1184.26	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=3.502;DP=462;FS=2.283;HRun=14;HaplotypeScore=67.7316;InbreedingCoeff=0.4440;MQ=73.92;MQ0=9;MQRankSum=0.192;QD=4.00;ReadPosRankSum=2.744;VQSLOD=0.8839;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:25:38.69:113,39,0	0/0:7,0:7:5.99:0,6,48	0/0:73,0:20:7.78:0,8,107	0/0:50,2:18:12.11:0,12,58	0/1:13,0:13:8.86:34,0,9	0/0:7,0:7:0.21:0,0,50	0/1:16,0:16:33.76:71,0,34	1/1:6,0:18:24.42:72,24,0	1/1:6,2:9:16.81:104,17,0	1/1:6,0:6:2.92:20,3,0	1/1:7,1:10:7.69:38,8,0	0/1:13,0:13:25.94:29,0,26	0/0:8,0:9:6.25:0,6,73	0/1:11,0:11:9.83:10,0,85	0/0:12,0:12:11.77:0,12,79	0/0:6,0:6:9.07:0,9,61	1/1:6,9:15:13.81:83,14,0	1/1:4,0:9:10.18:29,10,0	1/1:14,0:16:19.05:100,19,0	1/1:13,1:22:17.40:72,17,0	1/1:9,7:17:10.83:64,11,0	1/1:4,2:7:8.07:41,8,0	1/1:5,5:13:14.44:91,14,0	1/1:8,7:16:14.83:103,15,0	0/1:13,0:14:10.51:11,0,68	1/1:9,1:17:23.93:124,24,0	1/1:15,3:19:23.27:117,23,0	1/1:2,0:10:14.25:42,14,0
chr10	97128933	.	G	GT	298.71	PASS	AB=0.933;AC=7;AF=0.125;AN=56;BaseQRankSum=7.191;DP=647;FS=3.178;HRun=10;HaplotypeScore=80.3157;InbreedingCoeff=0.8346;MQ=76.90;MQ0=0;MQRankSum=-5.028;QD=3.98;ReadPosRankSum=-3.913;VQSLOD=-0.0167;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,3:48:99:0,100,1022	0/0:8,0:8:17.97:0,18,148	0/0:31,0:26:38.14:0,38,268	0/0:29,0:22:12.56:0,13,115	0/1:13,1:14:5.04:5,0,170	0/0:20,0:20:49.96:0,50,400	0/0:29,0:30:82.87:0,83,658	1/1:25,1:32:37.49:228,37,0	0/0:17,0:18:49.95:0,50,394	0/0:28,0:28:65.80:0,66,533	0/0:8,0:8:17.95:0,18,147	0/0:27,1:28:39.92:0,40,534	0/0:21,0:21:56.47:0,56,464	0/0:20,0:20:38.91:0,39,317	0/0:21,0:21:53.92:0,54,443	0/0:20,0:20:50.93:0,51,419	0/0:26,0:26:62.86:0,63,509	1/1:19,0:19:21.90:162,22,0	0/0:29,0:29:47.86:0,48,392	0/0:9,0:9:26.97:0,27,222	0/0:30,0:30:71.88:0,72,588	0/0:22,0:22:53.91:0,54,441	0/0:14,0:14:35.95:0,36,295	0/0:38,0:40:99:0,106,845	0/0:16,0:17:43.98:0,44,350	0/0:21,0:21:53.87:0,54,434	0/0:31,1:33:50.89:0,51,606	1/1:4,2:10:8.52:43,9,0
chr10	97130182	.	G	GGT	942.36	PASS	AB=0.920;AC=20;AF=0.400;AN=50;BaseQRankSum=-1.028;DP=631;FS=1.430;HRun=0;HaplotypeScore=104.7355;InbreedingCoeff=-0.2287;MQ=65.24;MQ0=8;MQRankSum=0.885;QD=2.45;ReadPosRankSum=-1.854;VQSLOD=2.0832;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:50,0:49:4.10:134,4,0	0/0:14,0:15:11.86:0,12,112	./.	./.	0/0:21,0:24:17.69:0,18,146	0/1:18,0:18:20.99:21,0,174	0/1:18,6:24:20.68:122,0,21	./.	0/0:13,0:17:11.28:0,11,71	0/1:22,2:22:21.21:21,0,159	0/1:8,0:8:10.95:11,0,50	1/1:13,7:20:5.77:89,6,0	0/1:16,0:17:9.93:10,0,86	0/1:9,5:15:42.19:115,0,42	0/1:16,0:20:15.08:15,0,225	0/0:22,0:27:35.84:0,36,374	0/1:24,0:24:30.22:30,0,171	0/0:14,0:18:18.34:0,18,110	0/1:25,0:24:25.65:26,0,68	0/0:18,0:23:5.83:0,6,47	0/1:43,0:49:51.51:52,0,417	1/1:25,1:25:12.13:121,12,0	0/1:15,5:20:26.71:39,0,27	0/1:11,11:22:41.38:244,0,41	0/1:12,0:14:35.89:36,0,38	0/0:32,0:31:23.65:0,24,378	0/0:18,0:20:23.22:0,23,214	0/1:1,0:5:12.84:13,0,19
chr10	97130697	.	A	AT	1443.13	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=0.135;DP=681;FS=0.495;HRun=7;HaplotypeScore=68.4689;InbreedingCoeff=0.9985;MQ=71.33;MQ0=0;MQRankSum=-1.421;QD=20.04;ReadPosRankSum=-2.966;VQSLOD=2.5575;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:33:77.85:397,78,0	0/0:13,0:13:36.06:0,36,348	0/0:12,0:12:29.84:0,30,278	0/0:12,0:12:27.03:0,27,254	0/0:29,0:29:75.10:0,75,718	0/0:29,0:29:84.13:0,84,811	0/0:28,0:28:81.13:0,81,782	1/1:3,23:26:69.21:832,69,0	0/0:26,0:26:75.10:0,75,718	0/0:35,0:35:90.12:0,90,864	0/0:26,0:26:69.11:0,69,666	0/0:26,0:26:78.13:0,78,753	0/0:31,0:31:87.14:0,87,840	0/0:17,0:17:48.08:0,48,463	0/0:24,0:24:63.09:0,63,604	0/0:25,0:25:72.12:0,72,695	0/0:26,0:26:66.10:0,66,637	0/0:18,0:18:45.07:0,45,435	0/0:25,0:25:69.10:0,69,662	0/0:30,0:30:84.13:0,84,811	0/0:9,0:9:24.04:0,24,232	0/0:28,0:28:75.11:0,75,724	0/0:28,0:28:78.10:0,78,746	0/0:23,0:23:63.10:0,63,608	0/0:26,0:26:75.12:0,75,724	0/0:39,0:39:99:0,111,1068	0/0:24,0:24:72.12:0,72,695	1/1:3,10:13:30.09:357,30,0
chr10	97130783	.	TG	T	1153.19	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.864;DP=726;FS=2.194;HRun=2;HaplotypeScore=68.0352;InbreedingCoeff=0.9701;MQ=63.11;MQ0=2;MQRankSum=0.357;QD=30.35;ReadPosRankSum=1.303;VQSLOD=3.3531;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:38:99:1248,108,0	0/0:11,0:11:33.11:0,33,528	0/0:34,0:25:74.92:0,75,1142	0/0:28,0:22:60.16:0,60,888	0/0:34,0:34:99:0,102,1576	0/0:18,0:18:54.18:0,54,863	0/0:19,0:19:54.18:0,54,863	0/0:30,0:30:90.29:0,90,1398	0/0:29,0:29:87.27:0,87,1340	0/0:41,0:41:99:0,123,1965	0/0:19,0:19:57.18:0,57,886	0/0:29,0:29:87.30:0,87,1391	0/0:28,0:28:84.29:0,84,1341	0/0:22,0:22:66.23:0,66,1055	0/0:28,0:28:84.29:0,84,1343	0/0:23,0:23:69.24:0,69,1097	0/0:30,0:30:87.77:0,88,1388	0/0:32,0:32:93.32:0,93,1486	0/0:24,0:22:66.20:0,66,1030	0/0:23,0:23:69.24:0,69,1098	0/0:31,0:31:90.29:0,90,1407	0/0:18,0:18:54.16:0,54,818	0/0:21,0:21:63.20:0,63,974	0/0:26,0:26:78.27:0,78,1247	0/0:29,0:29:87.29:0,87,1363	0/0:36,0:36:99:0,105,1676	0/0:20,0:20:60.20:0,60,957	0/0:5,0:5:12.04:0,12,189
chr10	97131774	.	ATC	A	257.12	PASS	AB=0.932;AC=20;AF=0.370;AN=54;BaseQRankSum=5.672;DP=528;FS=5.342;HRun=0;HaplotypeScore=71.2821;InbreedingCoeff=-0.3283;MQ=76.08;MQ0=15;MQRankSum=0.031;QD=0.82;ReadPosRankSum=0.854;VQSLOD=0.8801;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:8.85:78,9,0	0/0:4,0:4:6.02:0,6,89	0/0:48,0:26:1.25:0,1,3	0/0:57,0:26:0:0,0,0	0/1:12,1:13:14.71:15,0,158	0/1:18,3:22:40.09:40,0,316	0/1:18,0:18:13.06:13,0,245	./.	0/1:15,0:15:6.22:6,0,181	0/1:22,0:22:18.30:18,0,268	0/0:7,0:6:8.39:0,8,90	0/1:17,0:17:13.69:14,0,309	0/1:15,1:16:10.93:11,0,247	0/0:14,0:14:2.28:0,2,235	0/1:11,3:14:14.69:15,0,185	0/1:17,2:19:42.53:43,0,290	0/1:17,3:20:8.64:9,0,274	0/0:17,0:17:14.97:0,15,144	0/1:16,0:16:4.52:5,0,81	0/1:12,1:15:30.01:30,0,118	0/1:21,0:19:9.01:9,0,106	0/0:23,0:23:5.25:0,5,87	0/1:14,1:15:17.71:18,0,141	0/1:21,1:22:42.74:43,0,348	0/0:14,0:14:9.08:0,9,252	0/1:17,2:19:10.46:10,0,215	0/0:14,0:15:6.55:0,7,214	1/1:4,0:5:5.68:28,6,0
chr10	97131896	.	TAC	T	519.40	PASS	AB=0.969;AC=8;AF=0.143;AN=56;BaseQRankSum=7.909;DP=622;FS=16.020;HRun=0;HaplotypeScore=86.6734;InbreedingCoeff=0.6144;MQ=60.82;MQ0=14;MQRankSum=1.532;QD=5.30;ReadPosRankSum=-0.678;VQSLOD=1.0346;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,24:30:42.12:513,42,0	0/1:14,1:15:3.52:4,0,423	0/0:29,0:10:11.94:0,12,118	0/0:55,0:13:15.37:0,15,137	0/0:14,0:14:27.08:0,27,402	0/0:23,0:23:23.76:0,24,848	0/0:31,4:35:2.05:0,2,949	1/1:17,1:30:8.93:81,9,0	0/0:25,0:25:63.21:0,63,1003	0/0:32,0:32:41.37:0,41,1048	0/0:13,0:13:27.09:0,27,435	0/0:20,0:20:57.10:0,57,793	0/0:19,0:19:48.14:0,48,714	0/0:14,0:14:39.08:0,39,551	0/0:19,1:20:17.49:0,17,709	0/0:20,0:20:54.18:0,54,857	0/0:22,0:22:51.17:0,51,814	0/0:5,0:8:9:0,9,79	0/0:18,0:17:36.08:0,36,525	0/0:11,0:11:21.07:0,21,324	0/0:43,0:43:99:0,114,1701	0/0:20,0:20:38.21:0,38,586	0/0:10,0:10:24.08:0,24,380	0/0:29,2:29:35.58:0,36,1020	0/0:15,0:15:36.12:0,36,549	0/1:20,0:20:31.23:31,0,401	0/0:26,0:26:63.20:0,63,977	1/1:0,0:2:5.68:28,6,0
chr10	97132166	.	T	TTGTG	549.15	PASS	AB=0.994;AC=15;AF=0.288;AN=52;BaseQRankSum=3.842;DP=514;FS=2.767;HRun=0;HaplotypeScore=108.8881;InbreedingCoeff=0.3794;MQ=58.53;MQ0=18;MQRankSum=-0.952;QD=3.29;ReadPosRankSum=-2.587;VQSLOD=1.8700;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,13:35:12.04:282,12,0	1/1:6,0:6:2.99:23,3,0	./.	./.	0/0:7,0:7:8.93:0,9,120	0/0:12,0:12:19.08:0,19,203	0/0:23,0:22:27.07:0,27,352	0/1:21,0:20:8.42:8,0,37	0/0:11,0:11:1.77:0,2,218	0/0:12,0:11:9.88:0,10,113	0/1:3,0:2:0:0,0,0	0/1:30,0:29:78.82:79,0,110	0/0:19,0:19:20.82:0,21,261	0/0:21,0:19:11.93:0,12,135	0/0:14,0:18:14.98:0,15,211	0/0:18,0:17:15.03:0,15,192	0/0:52,0:50:62.02:0,62,858	1/1:19,0:18:14.26:193,14,0	0/0:21,0:22:13.73:0,14,187	0/0:8,0:7:5.90:0,6,68	0/0:34,0:31:27.31:0,27,343	0/1:11,0:11:18.20:28,0,18	1/1:7,0:6:2.30:15,2,0	0/1:29,0:29:52.81:53,0,83	0/0:9,0:9:5.69:0,6,58	0/0:18,0:17:13.71:0,14,232	0/0:11,0:11:11.91:0,12,187	1/1:5,0:3:2.98:21,3,0
chr10	97132193	.	TG	T	50.12	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=4.562;DP=480;FS=3.708;HRun=1;HaplotypeScore=60.1064;InbreedingCoeff=0.6536;MQ=49.66;MQ0=29;MQRankSum=-3.085;QD=8.35;ReadPosRankSum=-0.535;VQSLOD=0.7686;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:32.95:0,33,387	0/0:5,0:5:5.84:0,6,94	./.	0/0:21,0:5:12.02:0,12,147	0/0:7,0:7:15.05:0,15,219	0/0:11,0:10:25.57:0,26,345	0/0:26,0:24:71.05:0,71,869	0/0:21,1:17:8.93:0,9,499	0/0:11,0:11:22.74:0,23,363	0/0:14,0:12:36.12:0,36,525	0/0:5,0:4:6.02:0,6,75	0/0:24,0:21:51.02:0,51,695	0/0:16,0:16:48.14:0,48,671	0/0:16,0:14:27.56:0,28,382	0/0:22,0:22:53.18:0,53,673	0/0:15,0:14:33.10:0,33,464	0/0:46,0:44:99:0,116,1587	0/0:17,0:16:30.06:0,30,393	0/0:18,0:18:52.41:0,52,675	0/0:9,0:7:14.89:0,15,193	0/0:35,0:30:70.39:0,70,803	0/0:10,0:10:15.52:0,16,205	0/0:6,0:5:8.82:0,9,85	0/0:29,0:29:69.68:0,70,899	0/0:9,0:9:23.22:0,23,290	0/0:21,0:19:57.19:0,57,782	0/0:5,0:5:12.04:0,12,186	1/1:3,3:4:11.97:136,12,0
chr10	97132204	.	GT	G	412.73	PASS	AB=0.881;AC=6;AF=0.107;AN=56;BaseQRankSum=4.137;DP=462;FS=0.832;HRun=2;HaplotypeScore=53.9106;InbreedingCoeff=0.1734;MQ=48.87;MQ0=31;MQRankSum=-3.136;QD=5.29;ReadPosRankSum=-2.833;VQSLOD=-0.3876;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:28.22:0,28,329	0/0:4,0:4:6.02:0,6,89	0/0:34,0:3:9.03:0,9,119	0/0:27,0:10:24.04:0,24,253	0/0:6,0:6:11.86:0,12,164	0/0:10,0:9:14.20:0,14,261	0/1:23,2:23:8.23:8,0,686	0/1:10,8:13:99:261,0,132	0/0:12,0:12:34.80:0,35,391	0/0:12,0:10:28.91:0,29,381	0/0:5,0:4:6.02:0,6,80	0/0:20,0:17:1.46:0,1,324	0/0:14,0:14:28.27:0,28,455	0/0:13,1:12:27.03:0,27,316	0/0:20,0:20:44.58:0,45,569	0/0:10,0:9:24.08:0,24,340	0/0:42,0:40:93.97:0,94,1180	0/1:17,2:18:87.45:87,0,114	0/0:13,0:13:37.62:0,38,410	0/0:7,0:6:15.02:0,15,192	0/0:34,1:29:72.36:0,72,770	0/1:9,0:9:13.51:14,0,119	0/0:6,0:5:8.91:0,9,83	0/0:27,0:27:55.90:0,56,644	0/0:7,0:7:17.73:0,18,220	0/0:17,0:15:42.09:0,42,557	0/0:8,0:8:21.06:0,21,263	1/1:3,4:5:15.02:166,15,0
chr10	97132205	.	T	TTG	151.94	PASS	AB=0.797;AC=6;AF=0.107;AN=56;BaseQRankSum=3.028;DP=464;FS=0.000;HRun=0;HaplotypeScore=63.2619;InbreedingCoeff=0.3963;MQ=48.87;MQ0=30;MQRankSum=-2.343;QD=2.71;ReadPosRankSum=-0.257;VQSLOD=1.3195;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:26.18:0,26,275	0/0:4,0:4:5.62:0,6,50	0/0:34,0:4:9.01:0,9,94	0/0:29,0:11:18.88:0,19,146	0/0:6,0:6:6.02:0,6,68	0/0:10,0:9:12.03:0,12,136	0/0:25,0:23:42.11:0,42,492	1/1:18,0:13:6.49:70,6,0	0/1:12,0:12:10.73:11,0,185	0/0:12,0:10:21.05:0,21,234	0/0:4,0:4:5.91:0,6,71	0/0:20,0:18:24.40:0,24,211	0/0:13,0:14:26.89:0,27,283	0/0:14,0:12:14.79:0,15,158	0/0:20,0:20:36.10:0,36,418	0/0:10,0:9:18.03:0,18,191	0/0:40,0:39:53.18:0,53,565	0/1:6,12:18:18.84:155,0,19	0/0:13,0:13:14.93:0,15,151	0/0:7,0:6:11.98:0,12,119	0/0:34,0:29:50.77:0,51,535	0/0:9,0:9:11.66:0,12,119	0/0:6,0:5:8.45:0,8,79	0/0:28,0:28:40.98:0,41,428	0/0:7,0:7:11.83:0,12,139	0/0:17,0:15:27.07:0,27,309	0/0:8,0:8:8.86:0,9,104	1/1:6,0:5:5.58:33,6,0
chr10	97132371	.	CAT	C	294.91	PASS	AB=0.844;AC=11;AF=0.275;AN=40;BaseQRankSum=3.317;DP=171;FS=6.147;HRun=0;HaplotypeScore=24.9357;InbreedingCoeff=0.0630;MQ=64.83;MQ0=3;MQRankSum=-0.743;QD=3.73;ReadPosRankSum=0.842;VQSLOD=0.2125;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:14.06:63,14,0	0/0:4,0:4:3.01:0,3,47	./.	0/0:5,0:3:0:0,0,0	0/0:6,0:6:3.01:0,3,47	0/1:3,3:7:35.10:72,0,35	0/0:4,0:4:3.01:0,3,47	0/1:13,3:15:48.91:133,0,49	0/0:2,0:2:3.01:0,3,47	0/1:6,0:6:19.39:19,0,37	./.	./.	0/0:5,0:5:6.02:0,6,94	0/0:6,0:6:3.01:0,3,47	./.	0/0:4,0:4:6.01:0,6,72	0/0:11,0:12:27.05:0,27,365	1/1:17,0:17:4.99:18,5,0	0/0:3,0:2:6.02:0,6,93	./.	0/0:3,0:3:6.02:0,6,94	./.	./.	./.	0/1:3,1:4:25.98:26,0,81	0/0:12,0:12:3.01:0,3,47	0/1:3,0:3:28.98:29,0,39	1/1:7,0:7:6:58,6,0
chr10	97132395	.	TATGTAC	T	481.33	PASS	AB=1.000;AC=7;AF=0.159;AN=44;BaseQRankSum=2.561;DP=135;FS=7.646;HRun=0;HaplotypeScore=29.0660;InbreedingCoeff=0.3901;MQ=53.63;MQ0=2;MQRankSum=-1.099;QD=10.94;ReadPosRankSum=-0.550;VQSLOD=0.0183;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,1:10:19.16:297,19,0	0/0:2,0:2:6.02:0,6,157	./.	./.	0/0:5,0:5:9.03:0,9,221	0/0:8,0:8:18.04:0,18,288	0/0:3,0:3:6.49:0,6,155	0/1:17,0:14:99:127,0,99	0/0:2,0:2:6.02:0,6,157	0/0:5,0:5:15.04:0,15,250	0/0:2,0:2:3.01:0,3,49	0/0:2,0:2:2.84:0,3,49	0/0:2,0:2:6.02:0,6,211	0/0:3,0:3:9.03:0,9,189	0/0:1,0:1:3.01:0,3,49	0/0:3,0:3:6.02:0,6,81	0/0:18,0:18:45.15:0,45,1160	1/1:1,12:13:6.02:144,6,0	0/0:3,0:3:9.02:0,9,185	./.	0/0:3,0:3:6:0,6,131	./.	./.	./.	0/0:4,0:4:12.04:0,12,254	0/0:2,0:2:5.38:0,5,116	0/0:2,0:2:2.16:0,2,107	1/1:3,0:3:5.87:35,6,0
chr10	97132401	.	C	CAT	161.18	PASS	AB=1.000;AC=6;AF=0.143;AN=42;BaseQRankSum=0.384;DP=142;FS=1.487;HRun=0;HaplotypeScore=22.0055;InbreedingCoeff=0.3155;MQ=57.72;MQ0=2;MQRankSum=-2.122;QD=4.88;ReadPosRankSum=0.264;VQSLOD=1.7684;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,4:10:18.01:241,18,0	0/0:2,0:2:6.02:0,6,72	./.	./.	0/0:7,0:7:15.03:0,15,169	0/0:9,0:8:18.06:0,18,217	0/0:3,0:3:2.62:0,3,36	1/1:15,0:12:3.53:9,4,0	0/0:2,0:3:8.61:0,9,82	0/0:8,0:8:18.02:0,18,199	0/0:2,0:2:6.02:0,6,72	0/0:2,0:2:3.01:0,3,36	0/0:2,0:2:3.01:0,3,36	0/0:3,0:3:9.03:0,9,109	0/0:1,0:1:3.01:0,3,36	0/0:2,0:2:3.01:0,3,36	0/0:14,0:16:41.94:0,42,472	0/0:12,0:12:5.42:0,5,22	0/0:5,0:4:12.04:0,12,144	./.	./.	./.	./.	0/0:1,0:1:3:0,3,25	0/1:4,0:4:12.85:13,0,96	0/1:3,0:3:0:0,0,0	0/0:4,0:4:9.01:0,9,96	./.
chr10	97133386	.	AT	A	374.91	PASS	AB=0.874;AC=12;AF=0.214;AN=56;BaseQRankSum=5.331;DP=524;FS=1.104;HRun=15;HaplotypeScore=84.5569;InbreedingCoeff=0.2999;MQ=62.73;MQ0=7;MQRankSum=-3.028;QD=2.42;ReadPosRankSum=1.086;VQSLOD=-0.2431;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,18:22:50.15:324,50,0	0/1:5,2:7:4.31:4,0,83	0/1:15,0:9:7.15:7,0,21	0/0:10,0:9:8.48:0,8,43	0/0:19,0:20:31.15:0,31,252	0/0:13,1:15:10.24:0,10,178	0/0:26,0:25:37.59:0,38,308	1/1:12,0:24:32.53:104,33,0	0/0:12,1:15:26.44:0,26,201	0/1:22,4:27:13.77:14,0,277	0/1:11,2:12:20.54:21,0,88	0/0:18,1:19:10.64:0,11,196	0/0:7,0:7:0.86:0,1,45	0/0:16,0:16:15.75:0,16,155	0/0:15,0:16:30.95:0,31,232	0/1:9,3:13:14.73:15,0,115	0/0:33,3:36:36.39:0,36,556	0/0:13,0:12:14.55:0,15,86	0/0:26,2:29:13.93:0,14,346	0/0:24,0:24:30.65:0,31,288	0/0:21,0:22:12.51:0,13,205	0/0:13,1:16:26.70:0,27,203	0/1:19,2:21:14.74:15,0,113	0/0:19,0:20:24.31:0,24,199	0/0:18,1:19:19.70:0,20,290	0/0:16,1:17:4.61:0,5,150	0/0:23,2:25:5.83:0,6,252	1/1:2,0:8:11.05:31,11,0
chr10	97133406	.	CT	C	795.18	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=6.201;DP=495;FS=7.221;HRun=8;HaplotypeScore=64.3269;InbreedingCoeff=0.8954;MQ=48.01;MQ0=18;MQRankSum=-6.296;QD=10.33;ReadPosRankSum=1.819;VQSLOD=1.8615;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,23:27:42.04:401,42,0	0/0:7,0:7:12.04:0,12,145	0/0:6,0:2:0:0,0,0	./.	0/0:16,0:15:18.01:0,18,201	0/0:17,0:17:42.13:0,42,507	0/0:24,0:23:45.13:0,45,532	1/1:6,16:20:42.04:397,42,0	0/0:18,0:17:33.07:0,33,366	0/0:25,0:24:57.17:0,57,688	0/0:11,0:9:21.06:0,21,244	0/0:19,0:18:35.91:0,36,380	0/0:7,0:7:15.04:0,15,171	0/0:17,0:15:32.89:0,33,372	0/0:22,0:19:30.04:0,30,329	0/0:19,0:17:42.50:0,43,446	0/0:37,0:36:87.12:0,87,976	1/1:11,7:13:5.90:57,6,0	0/0:26,0:25:48.09:0,48,535	0/0:20,0:20:42.56:0,43,488	0/0:18,0:18:30.08:0,30,351	0/0:19,0:17:36.07:0,36,417	0/0:19,0:17:30.05:0,30,316	0/0:15,0:15:30.53:0,31,331	0/0:16,0:14:27.03:0,27,300	0/0:16,0:14:30.09:0,30,361	0/0:22,0:21:57.08:0,57,623	1/1:3,3:6:9.01:87,9,0
chr10	97133996	.	GA	G	1497.99	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.062;DP=490;FS=2.112;HRun=10;HaplotypeScore=68.2898;InbreedingCoeff=0.9660;MQ=73.47;MQ0=1;MQRankSum=0.899;QD=18.49;ReadPosRankSum=-1.992;VQSLOD=3.7355;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:24:58.06:481,58,0	0/0:11,0:12:35.90:0,36,360	0/0:14,0:13:6.76:0,7,141	0/0:13,0:11:17.63:0,18,144	0/0:27,1:28:43.21:0,43,685	0/0:14,0:14:39.11:0,39,431	0/0:18,0:18:51.12:0,51,554	1/1:3,21:24:56.98:494,57,0	0/0:18,0:18:25.66:0,26,475	0/0:17,1:18:24.91:0,25,480	0/0:17,1:19:24.91:0,25,479	0/0:11,0:11:27.06:0,27,290	0/0:11,0:11:27.06:0,27,291	0/0:18,1:19:25.07:0,25,496	0/0:10,0:10:27.04:0,27,286	0/0:24,0:24:69.19:0,69,763	0/0:24,0:25:59.94:0,60,620	1/1:1,15:16:38.99:338,39,0	0/0:22,1:23:34.10:0,34,597	0/0:25,0:26:68.84:0,69,688	0/0:13,0:13:36.09:0,36,391	0/0:16,0:16:43.92:0,44,460	0/0:16,0:16:36.10:0,36,398	0/0:9,0:9:24.05:0,24,257	0/0:13,2:15:16.05:0,16,397	0/0:19,0:20:54:0,54,570	0/0:17,0:17:48.09:0,48,510	1/1:0,16:17:41.03:345,41,0
chr10	97134469	.	GAGGCC	G	516.85	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.551;DP=698;FS=12.029;HRun=0;HaplotypeScore=128.0841;InbreedingCoeff=0.8948;MQ=75.70;MQ0=0;MQRankSum=0.273;QD=15.66;ReadPosRankSum=-3.798;VQSLOD=1.8411;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,126,3177	0/0:6,0:6:18.06:0,18,458	0/0:16,0:15:21.04:0,21,391	0/0:17,0:17:24.52:0,25,431	0/0:25,0:25:51.16:0,51,1336	0/0:35,0:35:81.22:0,81,2053	0/0:23,0:23:66.19:0,66,1640	1/1:13,14:27:41.98:605,42,0	0/0:27,0:27:72.25:0,72,2061	0/0:17,0:17:42.14:0,42,1105	0/0:17,0:17:36.10:0,36,855	0/0:29,0:29:84.25:0,84,2083	0/0:20,0:20:51.18:0,51,1389	0/0:23,0:23:63.21:0,63,1726	0/0:13,0:13:30.10:0,30,858	0/0:26,0:26:63.16:0,63,1684	0/0:44,0:44:99:0,114,3107	0/0:44,0:44:99:0,126,3396	0/0:33,0:33:69.19:0,69,1737	0/0:15,0:15:36.11:0,36,868	0/0:50,0:50:99:0,126,3436	0/0:25,0:25:57.15:0,57,1380	0/0:21,0:21:45.11:0,45,1084	0/0:32,0:32:75.26:0,75,2151	0/0:19,0:19:39.13:0,39,1025	0/0:21,0:21:42.14:0,42,1164	0/0:17,0:17:42.09:0,42,1093	1/1:6,0:6:2.97:20,3,0
chr10	97134811	.	C	CCTAA	3713.38	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.662;DP=717;FS=4.242;HRun=0;HaplotypeScore=115.6140;InbreedingCoeff=0.9996;MQ=81.45;MQ0=0;MQRankSum=-9.217;QD=64.02;ReadPosRankSum=-4.397;VQSLOD=4.4355;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,2537	0/0:13,0:13:39.13:0,39,706	0/0:20,0:20:51.17:0,51,895	0/0:25,0:25:58.63:0,59,955	0/0:30,0:30:72.25:0,72,1302	0/0:15,0:15:45.15:0,45,797	0/0:22,0:22:54.17:0,54,941	1/1:20,24:45:99:2934,120,0	0/0:19,0:19:51.17:0,51,924	0/0:41,0:41:99:0,120,2119	0/0:15,0:15:45.15:0,45,815	0/0:18,0:18:54.19:0,54,978	0/0:22,0:22:63.22:0,63,1134	0/0:17,0:17:48.16:0,48,862	0/0:36,0:36:99:0,99,1764	0/0:22,0:22:66.23:0,66,1190	0/0:34,0:34:90.31:0,90,1628	0/0:23,0:23:60.21:0,60,1065	0/0:26,0:26:72.25:0,72,1293	0/0:24,0:24:69.24:0,69,1224	0/0:45,0:45:99:0,117,2107	0/0:30,0:30:87.28:0,87,1546	0/0:17,0:17:39.13:0,39,707	0/0:24,0:24:69.24:0,69,1248	0/0:20,0:20:60.20:0,60,1069	0/0:22,0:22:57.20:0,57,1011	0/0:30,0:30:78.27:0,78,1404	1/1:2,10:13:30.10:779,30,0
chr10	97135399	.	CCT	C	539.29	PASS	AB=0.936;AC=10;AF=0.179;AN=56;BaseQRankSum=6.823;DP=796;FS=5.168;HRun=0;HaplotypeScore=100.2505;InbreedingCoeff=0.2705;MQ=75.31;MQ0=8;MQRankSum=0.299;QD=3.29;ReadPosRankSum=1.389;VQSLOD=1.9128;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,3:57:79.43:0,79,2202	0/0:7,0:7:18.06:0,18,284	0/0:71,0:31:41.70:0,42,501	0/0:78,0:42:52.20:0,52,738	0/0:22,0:22:57.11:0,57,881	0/0:31,0:31:78.25:0,78,1192	0/1:23,1:24:16.95:17,0,729	1/1:18,11:29:30.09:367,30,0	0/1:26,0:26:3.58:4,0,920	0/0:31,2:33:44.33:0,44,1230	0/1:13,1:14:3.83:4,0,455	0/0:26,0:26:72.23:0,72,1122	0/0:24,1:25:35.28:0,35,1014	0/0:24,0:24:32.33:0,32,1008	0/1:23,2:25:16.68:17,0,758	0/0:28,0:28:75.22:0,75,1142	0/0:37,0:37:53.87:0,54,1324	0/1:21,2:23:19.73:20,0,689	0/0:16,0:16:42.10:0,42,630	0/0:22,0:22:51.17:0,51,814	0/0:44,0:44:99:0,108,1732	0/0:19,1:20:5.21:0,5,576	0/0:17,0:17:2.85:0,3,546	0/0:31,1:32:40.35:0,40,1156	0/1:12,2:14:37.75:38,0,451	0/0:22,0:22:40.80:0,41,670	0/0:20,0:20:38.90:0,39,558	1/1:2,7:9:18.06:222,18,0
chr10	97136477	.	T	TCAA	2006.93	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.859;DP=612;FS=3.388;HRun=0;HaplotypeScore=97.4048;InbreedingCoeff=0.9751;MQ=74.42;MQ0=1;MQRankSum=-7.018;QD=60.82;ReadPosRankSum=-0.836;VQSLOD=5.1551;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1905	0/0:4,0:4:12.04:0,12,212	0/0:14,0:14:39.12:0,39,627	0/0:17,0:16:42.05:0,42,630	0/0:11,0:11:33.11:0,33,582	0/0:22,0:22:63.22:0,63,1112	0/0:46,0:46:99:0,132,2225	1/1:7,12:20:57.19:1277,57,0	0/0:18,0:18:54.17:0,54,924	0/0:18,0:18:54.19:0,54,953	0/0:5,0:5:15.05:0,15,263	0/0:40,0:39:99:0,111,1945	0/0:20,0:20:60.19:0,60,1029	0/0:28,0:28:84.27:0,84,1454	0/0:22,0:22:66.23:0,66,1164	0/0:18,0:18:51.17:0,51,900	0/0:32,0:32:90.29:0,90,1554	0/0:28,0:28:84.20:0,84,1416	0/0:20,0:20:51.12:0,51,840	0/0:8,0:8:24.08:0,24,423	0/0:52,0:52:99:0,157,2670	0/0:11,0:11:33.11:0,33,574	0/0:13,0:13:39.12:0,39,656	0/0:45,0:45:99:0,126,2180	0/0:19,0:19:57.20:0,57,997	0/0:16,0:16:45.13:0,45,764	0/0:16,0:16:48.16:0,48,847	1/1:0,12:13:36.12:851,36,0
chr10	97140381	.	CTTTCTTTCT	C	1315.83	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.236;DP=525;FS=7.538;HRun=0;HaplotypeScore=146.6978;InbreedingCoeff=0.8541;MQ=57.63;MQ0=12;MQRankSum=-5.708;QD=43.86;ReadPosRankSum=-3.398;VQSLOD=2.2676;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:57.13:0,57,1928	0/0:10,0:9:27.09:0,27,863	0/0:15,0:13:26.17:0,26,393	0/0:5,0:3:3.01:0,3,89	0/0:26,0:26:72.72:0,73,2670	0/0:17,0:17:45.14:0,45,1416	0/0:17,0:17:45.61:0,46,1527	1/1:17,6:24:62.10:1175,62,0	0/0:15,0:15:42.08:0,42,1419	0/0:21,0:21:55.28:0,55,1483	0/0:21,0:20:51.12:0,51,1540	0/0:24,0:24:44.64:0,45,1957	0/0:16,0:16:39.61:0,40,1489	0/0:12,0:12:36.12:0,36,1365	0/0:19,0:19:26.40:0,26,1315	0/0:19,0:19:54.16:0,54,1888	0/0:30,0:27:56.26:0,56,1943	0/0:25,0:25:66.15:0,66,2071	0/0:20,0:18:45.07:0,45,1273	0/0:30,0:28:81.20:0,81,2561	0/0:6,0:4:12.03:0,12,343	0/0:13,0:12:10.82:0,11,905	0/0:18,0:18:48.15:0,48,1671	0/0:23,0:22:57.40:0,57,1992	0/0:31,0:31:62.47:0,62,2585	0/0:20,0:20:54.18:0,54,1688	0/0:16,0:15:42.05:0,42,1156	1/1:2,2:4:9.03:255,9,0
chr10	97140389	.	C	CT	179.66	PASS	AB=0.882;AC=5;AF=0.089;AN=56;BaseQRankSum=1.735;DP=572;FS=7.957;HRun=15;HaplotypeScore=92.7345;InbreedingCoeff=0.1365;MQ=50.05;MQ0=29;MQRankSum=-0.146;QD=2.25;ReadPosRankSum=0.191;VQSLOD=-0.2415;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:14,15:26:15.94:211,0,16	0/0:13,0:12:18.51:0,19,100	0/1:6,0:4:0:0,0,0	0/1:3,0:1:0:0,0,0	0/0:30,1:31:27.02:0,27,277	0/0:19,1:19:10.11:0,10,172	0/0:18,0:18:25.78:0,26,157	0/0:21,1:24:2.54:0,3,27	0/0:16,1:18:23.95:0,24,124	0/1:16,5:22:55.51:56,0,84	0/0:21,0:20:31.25:0,31,183	0/0:19,0:21:35.55:0,36,192	0/0:22,0:22:21.23:0,21,122	0/0:14,0:14:20.84:0,21,110	0/0:22,1:25:9.71:0,10,146	0/0:20,0:21:41.59:0,42,238	0/0:33,0:28:16.57:0,17,198	0/0:27,0:26:37.02:0,37,216	0/1:16,1:15:1.86:2,0,99	0/0:29,0:31:49.83:0,50,285	0/0:7,0:5:10.37:0,10,58	0/0:11,0:11:15.80:0,16,83	0/0:21,1:20:7.20:0,7,122	0/0:20,1:22:17.53:0,18,185	0/0:27,0:34:52.92:0,53,276	0/0:20,1:22:16.25:0,16,97	0/0:16,2:17:0.87:0,1,106	0/0:5,0:4:3.87:0,4,11
chr10	97141470	.	C	CA	1409.54	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.793;DP=598;FS=5.107;HRun=9;HaplotypeScore=59.5523;InbreedingCoeff=0.7884;MQ=74.98;MQ0=0;MQRankSum=-0.352;QD=18.79;ReadPosRankSum=0.015;VQSLOD=3.8909;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,31:38:78:830,78,0	0/0:7,0:7:17.99:0,18,156	0/0:11,0:12:19.91:0,20,144	0/0:12,0:12:7.92:0,8,122	0/0:16,0:16:38.98:0,39,339	0/0:16,0:16:32.98:0,33,286	0/0:34,1:35:53.77:0,54,692	0/0:5,0:20:30.55:0,31,90	0/0:22,0:22:62.98:0,63,547	0/0:15,0:15:38.96:0,39,332	0/0:11,0:11:20.12:0,20,180	0/0:36,0:36:89.94:0,90,777	0/0:21,2:23:20.75:0,21,400	0/0:20,0:20:56.95:0,57,484	0/0:19,0:19:50.97:0,51,439	0/0:25,1:26:23.78:0,24,436	0/0:32,0:32:86.98:0,87,755	1/1:7,30:37:0.13:685,0,0	0/0:16,0:16:44.98:0,45,388	0/0:22,0:22:50.98:0,51,443	0/0:31,0:32:91.98:0,92,779	0/0:23,0:23:56.98:0,57,494	0/0:10,0:10:23.93:0,24,198	0/0:25,0:25:68.95:0,69,592	0/0:23,0:22:62.98:0,63,547	0/0:25,0:26:68.01:0,68,577	0/0:17,0:17:41.96:0,42,365	0/0:0,0:7:12.22:0,12,36
chr10	97147326	.	T	TTGC	4951.94	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-11.898;DP=640;FS=4.165;HRun=0;HaplotypeScore=94.2701;InbreedingCoeff=0.9069;MQ=69.28;MQ0=1;MQRankSum=-0.630;QD=25.14;ReadPosRankSum=0.428;VQSLOD=4.7235;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,6:28:18.06:363,18,0	0/0:11,0:11:24.08:0,24,340	0/0:18,0:17:30.10:0,30,418	0/0:16,0:16:18.06:0,18,254	0/0:9,0:9:12.04:0,12,169	0/0:16,0:16:18.06:0,18,250	0/0:34,0:34:66.20:0,66,902	0/0:20,0:20:27.06:0,27,346	0/0:26,0:26:63.19:0,63,860	0/0:25,0:25:24.07:0,24,322	0/0:14,0:14:2.94:0,3,40	0/0:37,0:37:90.29:0,90,1259	0/0:13,0:13:33.08:0,33,447	0/0:24,0:24:57.19:0,57,805	0/0:33,0:34:81.22:0,81,1109	0/0:22,0:22:42.14:0,42,595	0/0:41,0:41:93.27:0,93,1281	1/1:12,32:46:96.33:1937,96,0	1/1:9,6:16:21.04:348,21,0	1/1:13,2:16:3.01:60,3,0	1/1:27,22:51:18.63:1109,19,0	0/0:14,0:14:12.03:0,12,152	0/0:12,0:12:15.04:0,15,197	0/0:35,0:35:78.26:0,78,1103	0/0:14,0:14:15.04:0,15,195	1/1:13,10:23:30.07:529,30,0	1/1:6,11:17:30.10:606,30,0	0/0:7,0:7:12.04:0,12,170
chr10	97148416	.	CAT	C	4277.67	PASS	AB=0.708;AC=12;AF=0.214;AN=56;BaseQRankSum=6.288;DP=605;FS=2.743;HRun=0;HaplotypeScore=87.6394;InbreedingCoeff=0.8305;MQ=71.34;MQ0=5;MQRankSum=1.389;QD=27.96;ReadPosRankSum=-1.803;VQSLOD=5.7683;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:31,3:34:85.69:993,86,0	0/0:10,0:10:4.16:0,4,287	0/0:27,0:22:44.90:0,45,839	0/0:35,0:19:20.49:0,20,734	0/0:23,0:23:66.22:0,66,1095	0/0:17,0:17:51.09:0,51,888	0/0:19,0:19:54.01:0,54,839	0/0:26,0:26:73.85:0,74,1198	0/0:18,0:18:50.72:0,51,768	0/0:24,0:24:68.97:0,69,1120	0/0:12,0:12:21.06:0,21,284	0/0:12,0:12:30.91:0,31,538	0/0:26,0:26:33.23:0,33,1110	0/0:18,0:18:48.17:0,48,723	0/0:24,0:24:69.11:0,69,1140	0/0:20,0:20:60.11:0,60,1032	0/0:35,0:35:96.30:0,96,1515	0/1:11,2:13:7.38:371,0,7	1/1:3,12:14:25.62:454,26,0	1/1:21,1:22:50.32:644,50,0	1/1:22,1:23:62.37:828,62,0	0/0:18,0:18:54.18:0,54,943	0/0:17,0:17:51.05:0,51,772	0/0:30,0:29:80.55:0,81,1192	0/0:19,0:18:57.11:0,57,978	1/1:4,25:29:21.55:954,22,0	0/1:3,14:16:0.57:33,0,1	0/0:22,0:22:63.20:0,63,1016
chr10	97148418	.	TTC	T	313.10	PASS	AB=0.876;AC=10;AF=0.192;AN=52;BaseQRankSum=2.984;DP=655;FS=4.861;HRun=0;HaplotypeScore=107.2269;InbreedingCoeff=-0.0714;MQ=68.85;MQ0=8;MQRankSum=0.710;QD=1.79;ReadPosRankSum=2.159;VQSLOD=1.9197;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:26.92:0,27,404	0/1:8,3:11:80.79:81,0,97	./.	./.	0/0:22,0:23:12.96:0,13,320	0/0:19,1:20:3.12:0,3,381	0/1:17,3:21:49.97:50,0,248	0/0:30,0:30:11.92:0,12,103	0/1:19,1:21:11.91:12,0,217	0/0:17,0:26:33.86:0,34,302	0/0:9,0:14:3:0,3,27	0/1:10,3:13:47.81:48,0,157	0/0:28,3:31:5.19:0,5,418	0/1:14,4:18:91.88:92,0,109	0/1:24,1:25:7.73:8,0,393	0/0:19,1:20:3.16:0,3,430	0/0:28,0:36:51.08:0,51,581	1/1:16,0:15:12.48:69,12,0	0/0:16,0:15:10.55:0,11,97	0/0:21,0:21:14.16:0,14,153	0/0:24,0:24:22.33:0,22,202	0/0:21,0:20:27.08:0,27,371	0/0:19,0:19:6.02:0,6,86	0/1:25,4:28:83.65:84,0,478	0/1:20,1:20:8.87:9,0,275	0/0:32,0:32:25:0,25,200	0/0:20,0:19:6.49:0,6,69	0/0:29,0:28:20.92:0,21,218
chr10	97150718	.	TTG	T	140.60	PASS	AB=0.931;AC=15;AF=0.288;AN=52;BaseQRankSum=3.802;DP=729;FS=0.000;HRun=0;HaplotypeScore=121.9053;InbreedingCoeff=-0.2279;MQ=64.51;MQ0=7;MQRankSum=-1.512;QD=0.36;ReadPosRankSum=0.260;VQSLOD=2.0469;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:4.50:0,5,27	0/1:11,4:15:26.81:27,0,39	./.	./.	0/1:21,3:24:20.46:20,0,113	0/0:22,0:22:20.91:0,21,235	0/1:30,6:36:26.16:26,0,374	0/0:29,0:29:0:0,0,0	0/0:23,0:23:4.54:0,5,296	0/0:34,0:34:16.66:0,17,343	0/0:17,0:17:10.50:0,10,100	0/1:19,3:22:41.38:41,0,185	0/0:18,0:18:15.03:0,15,201	0/1:31,1:33:5.74:6,0,539	0/1:29,3:32:11.07:11,0,220	0/0:28,0:28:24.08:0,24,332	0/1:28,1:30:10.50:10,0,316	1/1:15,0:14:6.97:60,7,0	0/0:16,0:16:10.89:0,11,81	0/1:24,0:24:18.39:18,0,34	0/1:42,0:42:4.63:5,0,46	0/0:22,0:22:18.05:0,18,247	0/0:19,0:18:13.29:0,13,172	0/1:40,1:41:4.63:5,0,658	0/1:13,2:15:14.58:15,0,172	0/1:35,0:35:21.97:22,0,187	0/1:27,0:27:17.05:17,0,61	0/0:9,0:9:6.02:0,6,89
chr10	97150756	.	GTGT	G	48.17	PASS	AB=0.722;AC=1;AF=0.018;AN=56;BaseQRankSum=4.894;DP=727;FS=2.958;HRun=0;HaplotypeScore=149.2566;InbreedingCoeff=0.0048;MQ=54.40;MQ0=15;MQRankSum=-3.449;QD=3.71;ReadPosRankSum=0.461;VQSLOD=2.6250;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:16.14:0,16,321	0/0:10,0:10:20.79:0,21,240	0/0:21,0:10:23.94:0,24,279	0/0:34,0:12:31.72:0,32,333	0/0:21,0:21:57.05:0,57,831	0/0:23,0:23:62.74:0,63,1066	0/0:47,0:47:99:0,123,1910	0/0:28,0:28:82.12:0,82,1038	0/0:24,0:24:69.05:0,69,1130	0/0:29,0:29:81.25:0,81,1367	0/0:18,0:18:42.14:0,42,639	0/0:26,0:26:60.29:0,60,905	0/0:20,0:18:42.61:0,43,713	0/0:40,0:39:99:0,103,1695	0/0:28,0:28:69.12:0,69,1081	0/0:17,0:17:44.31:0,44,843	0/0:32,0:32:85.89:0,86,1306	0/1:8,5:13:18.92:123,0,19	0/0:14,0:14:38.11:0,38,536	0/0:18,0:18:29.98:0,30,394	0/0:60,0:59:49.29:0,49,869	0/0:29,0:29:57.95:0,58,998	0/0:15,0:14:37.37:0,37,602	0/0:46,0:47:99:0,111,1966	0/0:21,0:21:47.97:0,48,738	0/0:32,0:31:92.91:0,93,1282	0/0:21,0:20:36.72:0,37,431	0/0:7,0:7:18.06:0,18,320
chr10	97150759	.	TGTGG	T	1462.44	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=11.276;DP=688;FS=5.084;HRun=0;HaplotypeScore=152.0357;InbreedingCoeff=0.8728;MQ=54.62;MQ0=14;MQRankSum=-1.917;QD=7.99;ReadPosRankSum=-0.577;VQSLOD=2.3567;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:31:15.29:115,15,0	0/0:8,0:8:15.01:0,15,165	0/0:19,0:11:22.73:0,23,216	0/0:32,0:14:7.66:0,8,189	0/0:20,0:20:46.92:0,47,554	0/0:23,0:23:54.83:0,55,813	0/0:46,0:46:95.88:0,96,1183	0/0:32,0:32:77.95:0,78,696	0/0:22,0:22:42.04:0,42,518	0/0:22,0:22:27.68:0,28,564	0/0:18,0:18:22.26:0,22,378	0/0:23,0:23:49.19:0,49,595	0/0:18,0:16:16.83:0,17,472	0/0:36,0:35:54.52:0,55,1057	0/0:25,0:25:56.60:0,57,704	0/0:17,0:17:42.97:0,43,674	0/0:28,0:28:59.21:0,59,838	0/1:13,0:13:39.86:89,0,40	1/1:12,0:12:20.80:146,21,0	1/1:17,1:18:20.42:153,20,0	1/1:61,0:60:58.41:498,58,0	0/0:26,0:26:51.75:0,52,713	0/0:14,0:13:27.03:0,27,362	0/0:48,0:48:99:0,105,1523	0/0:21,0:21:38.70:0,39,429	1/1:30,0:29:49.98:392,50,0	1/1:11,6:16:20.90:258,21,0	0/0:7,0:7:18.03:0,18,320
chr10	97150774	.	ATG	A	2457.64	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.089;DP=715;FS=11.133;HRun=0;HaplotypeScore=139.4157;InbreedingCoeff=0.9925;MQ=60.82;MQ0=5;MQRankSum=-5.713;QD=18.20;ReadPosRankSum=0.251;VQSLOD=3.0982;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:15.03:0,15,231	0/0:11,0:11:30.10:0,30,510	0/0:34,0:26:66.07:0,66,967	0/0:55,0:32:43.73:0,44,1109	0/0:15,0:15:45.15:0,45,779	0/0:27,0:27:66.19:0,66,1138	0/0:43,0:43:99:0,123,2070	0/0:35,0:35:90.31:0,90,1552	0/0:19,0:19:45.15:0,45,765	0/0:19,0:19:51.16:0,51,835	0/0:19,0:19:42.14:0,42,727	0/0:24,0:24:59.99:0,60,912	0/0:20,0:19:48.04:0,48,704	0/0:34,0:34:78.09:0,78,1125	0/0:25,0:25:60.21:0,60,1039	0/0:19,0:19:48.14:0,48,775	0/0:26,0:26:60.16:0,60,966	0/0:17,0:17:21:0,21,329	1/1:5,9:14:23.76:318,24,0	1/1:3,18:21:26.98:359,27,0	1/1:13,49:62:72.67:1031,73,0	0/0:25,0:25:49.02:0,49,879	0/0:16,0:16:39.10:0,39,619	0/0:44,0:44:99:0,114,1739	0/0:16,0:16:45.12:0,45,707	1/1:4,18:22:53.85:689,54,0	1/1:7,9:15:20.95:235,21,0	0/0:7,0:7:21.07:0,21,363
chr10	97150807	.	T	TGTGTG	887.08	PASS	AB=0.591;AC=3;AF=0.054;AN=56;BaseQRankSum=4.594;DP=881;FS=9.522;HRun=0;HaplotypeScore=205.4362;InbreedingCoeff=0.6345;MQ=64.45;MQ0=29;MQRankSum=-5.464;QD=17.74;ReadPosRankSum=-3.296;VQSLOD=1.9143;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,25:36:21.07:577,21,0	0/0:15,0:15:42.13:0,42,706	0/0:80,0:30:33.07:0,33,445	0/0:89,0:48:29.40:0,29,421	0/0:18,0:18:36.11:0,36,611	0/0:29,0:29:63.21:0,63,1153	0/0:47,0:47:93.17:0,93,1599	0/0:30,0:30:41.37:0,41,593	0/0:25,0:25:66.21:0,66,1160	0/0:28,0:26:57.18:0,57,971	0/0:19,0:19:38.72:0,39,652	0/0:30,0:30:78.27:0,78,1415	0/0:19,0:19:51.17:0,51,944	0/0:25,0:25:63.20:0,63,1046	0/0:27,0:27:72.24:0,72,1275	0/0:27,0:27:66.67:0,67,1072	0/0:20,0:20:45.13:0,45,790	0/1:4,8:12:9.60:415,0,10	0/0:20,0:16:14.95:0,15,489	0/0:29,0:27:56.59:0,57,975	0/0:94,0:93:99:0,113,2062	0/0:19,0:19:44.92:0,45,717	0/0:17,0:17:45.15:0,45,830	0/0:59,0:59:99:0,141,2551	0/0:24,0:23:60.19:0,60,1064	0/0:26,0:25:60.20:0,60,995	0/0:11,0:11:30.03:0,30,484	0/0:3,0:3:6.02:0,6,113
chr10	97152347	.	GAC	G	468.82	PASS	AB=0.941;AC=13;AF=0.250;AN=52;BaseQRankSum=0.353;DP=801;FS=3.455;HRun=0;HaplotypeScore=135.2240;InbreedingCoeff=0.2776;MQ=50.17;MQ0=34;MQRankSum=2.130;QD=2.05;ReadPosRankSum=-1.428;VQSLOD=2.5119;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:16.69:0,17,105	1/1:2,2:6:8.86:80,9,0	./.	./.	1/1:12,6:18:9.33:80,9,0	0/0:12,0:19:6:0,6,51	0/0:33,0:45:11.23:0,11,96	0/0:31,0:24:12.38:0,12,96	0/0:26,2:28:4.53:0,5,431	0/1:25,0:25:13.97:14,0,159	0/0:14,0:13:15:0,15,163	0/0:13,0:39:29.69:0,30,251	0/0:9,0:26:6.57:0,7,40	0/0:8,0:21:14.99:0,15,130	0/0:15,0:29:11.99:0,12,102	1/1:14,18:32:32.81:342,33,0	0/1:26,2:28:40.30:40,0,566	0/0:25,0:24:13.29:0,13,73	0/0:30,0:30:3.04:0,3,87	0/0:32,0:32:1.86:0,2,20	1/1:63,0:59:3.51:13,4,0	0/0:10,0:16:5.76:0,6,48	0/0:16,0:15:4.56:0,5,36	0/0:23,0:54:32.99:0,33,286	0/1:20,0:18:11.92:12,0,176	0/1:21,0:28:14.64:15,0,74	0/0:27,0:27:23.62:0,24,187	0/1:6,0:5:27.31:27,0,55
chr10	97152355	.	C	CAG	1826.84	PASS	AB=0.991;AC=12;AF=0.214;AN=56;BaseQRankSum=9.455;DP=815;FS=3.604;HRun=0;HaplotypeScore=135.7981;InbreedingCoeff=0.3006;MQ=49.67;MQ0=41;MQRankSum=0.628;QD=5.80;ReadPosRankSum=2.922;VQSLOD=3.2764;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:39,1:39:61.57:367,0,62	0/0:6,0:6:14.96:0,15,119	0/0:35,0:11:25.34:0,25,184	0/0:45,0:11:16.38:0,16,153	0/0:17,0:16:26.23:0,26,196	0/0:21,0:19:22.68:0,23,191	0/0:47,0:47:60.44:0,60,622	0/0:33,0:26:68.13:0,68,542	0/0:29,0:29:59.54:0,60,793	0/0:23,0:23:67.40:0,67,596	0/0:14,0:13:26.02:0,26,242	0/1:42,0:42:31.41:31,0,300	0/0:26,0:26:1.95:0,2,142	0/1:19,0:19:29.03:29,0,72	0/0:27,0:27:35.97:0,36,300	0/0:31,0:31:62.87:0,63,507	0/0:31,0:32:83.63:0,84,912	0/1:24,0:23:44.51:287,0,45	0/1:29,1:30:31.01:258,0,31	1/1:33,1:34:13.93:201,14,0	1/1:68,0:62:8.86:207,9,0	0/0:18,0:16:17.91:0,18,133	0/0:13,0:12:19.87:0,20,125	0/0:55,0:55:29.70:0,30,408	0/0:20,0:18:45.01:0,45,468	0/1:30,0:28:99:257,0,102	1/1:27,1:28:12.16:350,12,0	0/0:8,0:6:17.97:0,18,165
chr10	97152369	.	C	CACACAG	1747.53	PASS	AB=0.997;AC=14;AF=0.250;AN=56;BaseQRankSum=8.939;DP=800;FS=0.450;HRun=0;HaplotypeScore=180.6001;InbreedingCoeff=-0.0753;MQ=52.34;MQ0=41;MQRankSum=-3.569;QD=4.70;ReadPosRankSum=4.698;VQSLOD=2.1168;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:15.53:0,16,264	0/0:7,0:7:18.02:0,18,219	0/0:29,0:10:17.10:0,17,219	0/0:38,0:15:32.44:0,32,272	0/0:19,0:18:26.88:0,27,289	0/1:23,0:21:4.26:4,0,123	0/0:39,0:39:22.51:0,23,349	0/0:31,0:25:62.38:0,62,479	0/0:32,0:32:82.79:0,83,1069	0/0:28,0:28:64.72:0,65,638	0/0:12,0:12:20.98:0,21,242	0/0:41,0:41:7.28:0,7,329	0/1:28,0:28:35.28:35,0,161	0/1:19,0:19:44.46:44,0,92	0/1:22,0:22:42.46:42,0,155	0/0:36,0:36:78.04:0,78,903	0/0:42,0:42:99:0,109,1396	0/1:20,0:20:6.09:6,0,154	0/1:24,0:25:7.90:421,0,8	1/1:5,15:29:8.86:134,9,0	0/1:67,0:61:36.15:217,0,36	0/1:15,0:13:10.12:10,0,80	0/1:13,0:12:22.62:23,0,119	0/1:57,0:57:99:131,0,428	0/0:24,0:22:59.78:0,60,659	0/1:27,0:26:2.75:467,0,3	0/1:27,0:27:73.13:366,0,73	0/0:9,0:7:15:0,15,178
chr10	97152688	.	TGA	T	912.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.577;DP=568;FS=0.743;HRun=0;HaplotypeScore=77.9878;InbreedingCoeff=0.9982;MQ=86.82;MQ0=0;MQRankSum=-2.647;QD=33.80;ReadPosRankSum=0.716;VQSLOD=5.5512;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:72.24:1007,72,0	0/0:9,0:9:27.09:0,27,486	0/0:29,0:29:55.83:0,56,1221	0/0:12,0:11:30.10:0,30,529	0/0:18,0:18:51.17:0,51,905	0/0:16,0:16:48.16:0,48,855	0/0:21,0:21:60.21:0,60,1079	0/0:28,0:28:78.27:0,78,1384	0/0:22,0:22:60.21:0,60,1068	0/0:25,0:25:66.23:0,66,1182	0/0:13,0:13:39.13:0,39,702	0/0:17,0:17:48.16:0,48,863	0/0:31,0:31:87.28:0,87,1521	0/0:15,0:15:45.15:0,45,810	0/0:35,0:35:99:0,99,1782	0/0:19,0:19:57.20:0,57,1026	0/0:19,0:18:57.20:0,57,1015	0/0:20,0:20:57.07:0,57,1023	0/0:21,0:21:48.16:0,48,852	0/0:16,0:16:45.15:0,45,809	0/0:19,0:19:45.15:0,45,793	0/0:15,0:15:42.13:0,42,714	0/0:15,0:15:45.15:0,45,810	0/0:21,0:21:57.18:0,57,986	0/0:14,0:14:39.13:0,39,690	0/0:22,0:22:63.20:0,63,1094	0/0:30,0:30:84.29:0,84,1485	0/0:19,0:19:57.20:0,57,1014
chr10	97153086	.	A	ATG	1656.34	PASS	AB=0.817;AC=10;AF=0.179;AN=56;BaseQRankSum=5.591;DP=673;FS=4.650;HRun=0;HaplotypeScore=120.6273;InbreedingCoeff=0.6877;MQ=67.04;MQ0=3;MQRankSum=-1.074;QD=11.75;ReadPosRankSum=0.114;VQSLOD=3.4459;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:27:37.18:55,0,37	0/0:13,0:13:30.08:0,30,356	0/0:23,0:15:27.01:0,27,290	0/0:23,0:15:2.53:0,3,31	0/0:30,0:30:65.95:0,66,796	0/0:22,0:22:48.15:0,48,591	0/0:30,0:30:54.15:0,54,651	0/0:30,0:30:63.12:0,63,724	0/0:20,0:21:53.99:0,54,629	0/0:41,0:41:83.36:0,83,1242	0/0:28,0:28:44.88:0,45,541	0/0:21,0:21:51.13:0,51,602	0/0:29,0:29:66.21:0,66,812	0/0:15,0:15:39.12:0,39,479	0/0:28,0:28:66.19:0,66,800	0/0:19,0:19:45.14:0,45,554	0/0:23,0:23:54:0,54,642	0/0:34,0:34:76.75:0,77,628	1/1:12,6:18:18.03:244,18,0	1/1:4,12:16:6.02:85,6,0	1/1:14,1:15:21.07:342,21,0	0/0:22,0:22:57.17:0,57,689	0/0:17,0:17:36.11:0,36,442	0/0:24,0:24:57.16:0,57,689	0/0:25,0:25:60.16:0,60,713	0/1:14,19:33:61.97:749,0,62	1/1:9,23:32:23.75:343,24,0	0/0:14,0:14:24.05:0,24,280
chr10	97153100	.	GTA	G	457	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=5.043;DP=632;FS=1.497;HRun=0;HaplotypeScore=112.9029;InbreedingCoeff=0.4743;MQ=58.74;MQ0=5;MQRankSum=3.342;QD=4.62;ReadPosRankSum=-4.904;VQSLOD=0.8309;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:9.79:120,10,0	0/0:11,0:11:30.10:0,30,556	0/0:22,0:11:27.02:0,27,401	0/1:23,0:9:22.52:50,0,23	0/0:30,0:30:69.19:0,69,1225	0/0:19,0:19:51.16:0,51,895	0/0:24,0:24:69.17:0,69,1136	0/0:29,0:29:87.21:0,87,1363	0/0:20,0:20:40.54:0,41,960	0/0:45,0:45:99:0,129,2208	0/0:28,0:27:51.14:0,51,883	0/0:19,0:19:57.15:0,57,959	0/0:25,0:25:75.23:0,75,1340	0/0:17,0:17:51.13:0,51,864	0/0:27,0:27:80.86:0,81,1305	0/0:18,0:18:51.16:0,51,931	0/0:23,0:23:66.15:0,66,1098	0/0:30,0:30:78.23:0,78,1321	0/1:11,0:11:66.74:67,0,99	0/0:19,0:18:8.27:0,8,46	1/1:4,8:12:20.97:173,21,0	0/0:25,0:25:69.07:0,69,1122	0/0:18,0:18:36.12:0,36,662	0/0:23,0:23:66.17:0,66,1140	0/0:28,0:28:75.19:0,75,1283	0/1:30,0:30:99:185,0,429	0/0:22,0:22:24.01:0,24,117	0/0:10,0:10:27.05:0,27,426
chr10	97153104	.	G	GTA	1932.84	PASS	AB=0.821;AC=11;AF=0.204;AN=54;BaseQRankSum=10.810;DP=623;FS=5.629;HRun=0;HaplotypeScore=116.2196;InbreedingCoeff=0.7566;MQ=56.41;MQ0=4;MQRankSum=-2.335;QD=15.84;ReadPosRankSum=1.557;VQSLOD=3.0980;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:7.40:395,7,0	0/0:12,0:12:21.07:0,21,262	0/0:19,0:9:3.01:0,3,38	0/0:20,0:5:5.81:0,6,34	0/0:33,0:33:59.95:0,60,720	0/0:20,0:20:39.11:0,39,474	0/0:24,0:24:57.15:0,57,684	0/0:31,0:31:81.23:0,81,970	0/0:20,0:20:54.15:0,54,657	0/0:48,1:48:65.22:0,65,1292	0/0:27,0:26:44.85:0,45,532	0/0:17,0:17:48.15:0,48,599	0/0:26,0:26:69.21:0,69,850	0/0:18,0:18:51.15:0,51,621	0/0:25,0:26:72.03:0,72,851	0/0:19,0:19:51.13:0,51,611	0/0:23,0:23:17.79:0,18,635	1/1:2,26:28:66.23:1089,66,0	1/1:8,0:9:6.10:91,6,0	1/1:18,0:18:5.99:51,6,0	./.	0/0:24,0:24:57.16:0,57,699	0/0:18,0:19:29.12:0,29,339	0/0:23,0:23:57.16:0,57,698	0/0:29,0:29:69.22:0,69,860	0/1:18,0:23:67.88:245,0,68	1/1:11,0:22:26.73:222,27,0	0/0:12,0:12:18.06:0,18,223
chr10	97153428	.	T	TATA	2362.47	PASS	AB=0.976;AC=23;AF=0.411;AN=56;BaseQRankSum=12.622;DP=1186;FS=37.540;HRun=0;HaplotypeScore=395.9023;InbreedingCoeff=-0.6400;MQ=30.57;MQ0=10;MQRankSum=-8.375;QD=2.24;ReadPosRankSum=0.994;VQSLOD=0.8063;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:15.52:16,0,77	0/1:29,0:29:74.86:75,0,118	0/0:10,0:1:3.01:0,3,55	0/0:15,0:5:15.05:0,15,254	0/1:68,0:68:99:191,0,135	0/1:33,1:32:63.32:186,0,63	0/1:40,1:40:60.32:60,0,511	0/1:46,2:50:99:125,0,1053	0/1:41,0:41:42.73:43,0,260	0/1:84,1:84:99:272,0,1749	0/1:49,1:50:58.84:119,0,59	0/1:43,3:46:99:192,0,168	0/1:32,3:34:52.53:53,0,266	0/0:23,1:25:2.66:0,3,76	0/1:41,0:41:10.78:11,0,84	0/1:31,3:34:21.56:88,0,22	0/0:28,0:28:2.69:0,3,346	0/0:29,0:29:35.27:0,35,1032	0/1:34,0:34:6.86:7,0,628	0/1:63,0:63:99:305,0,239	0/1:55,0:54:48.31:48,0,157	0/1:75,1:77:99:244,0,131	1/1:56,1:56:0.07:214,0,0	0/0:24,0:24:2.49:0,2,55	0/1:58,0:58:70.16:172,0,70	0/1:58,0:57:68.40:68,0,1548	0/1:37,0:36:3.83:4,0,518	0/1:26,0:26:16.64:17,0,562
chr10	97153429	.	G	GC	2624.17	PASS	AB=0.908;AC=20;AF=0.357;AN=56;BaseQRankSum=7.700;DP=1169;FS=8.734;HRun=0;HaplotypeScore=349.8644;InbreedingCoeff=-0.4292;MQ=30.46;MQ0=10;MQRankSum=-2.554;QD=3.02;ReadPosRankSum=4.023;VQSLOD=1.5828;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:2.82:3,0,42	0/1:25,4:29:98.04:98,0,158	0/0:11,0:1:3.01:0,3,41	0/0:15,0:5:15.05:0,15,206	0/1:57,11:68:99:241,0,122	0/1:27,6:31:65.64:233,0,66	0/1:40,1:40:30.06:30,0,407	0/0:51,0:50:99:0,111,1165	0/1:38,3:41:99:146,0,163	0/1:69,15:82:99:231,0,1551	0/1:45,5:50:53.43:134,0,53	0/1:40,5:45:99:187,0,162	0/1:33,1:33:28.64:29,0,264	0/1:25,0:25:13.83:14,0,56	0/1:39,1:40:33.86:34,0,61	1/1:32,1:33:11.95:80,12,0	0/1:27,1:28:13.01:13,0,278	0/0:26,2:29:31.67:0,32,752	0/0:34,0:32:32.28:0,32,556	0/1:44,18:62:99:455,0,148	0/0:54,0:52:0.98:0,1,132	0/1:68,9:77:99:307,0,179	0/1:43,14:56:37.18:265,0,37	0/0:24,0:24:3.01:0,3,42	0/1:48,9:57:99:277,0,100	0/0:53,6:58:23.26:0,23,1370	0/1:35,2:36:5.02:5,0,434	0/0:23,1:24:19.85:0,20,500
chr10	97153430	.	T	TA	3612.58	PASS	AB=0.972;AC=23;AF=0.411;AN=56;BaseQRankSum=8.873;DP=1160;FS=0.642;HRun=0;HaplotypeScore=356.2967;InbreedingCoeff=-0.5688;MQ=30.38;MQ0=10;MQRankSum=-2.785;QD=3.57;ReadPosRankSum=3.685;VQSLOD=2.2478;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,1:26:31.11:31,0,40	0/1:28,0:28:91.68:118,0,92	0/0:10,0:1:3.01:0,3,41	0/0:14,0:4:12.04:0,12,165	0/1:68,0:68:99:243,0,110	0/1:32,0:31:64.62:269,0,65	0/1:37,3:40:99:113,0,371	0/0:43,6:49:5.60:0,6,763	0/1:40,0:41:99:257,0,139	0/1:83,1:82:99:307,0,1279	0/1:50,0:50:48.29:168,0,48	0/1:45,0:45:86.74:295,0,87	0/1:33,0:33:47.31:47,0,227	0/1:24,0:24:36.35:36,0,50	0/1:40,0:40:39.40:83,0,39	1/1:32,0:32:28.36:209,28,0	0/1:28,0:28:17.10:17,0,251	0/0:28,0:28:26.35:0,26,715	0/1:28,5:31:0.89:1,0,420	0/1:62,0:62:99:456,0,193	0/1:49,2:50:17.58:18,0,108	0/1:75,1:76:99:330,0,129	0/1:55,3:59:11.88:285,0,12	0/0:24,0:24:2.61:0,3,41	0/1:57,0:57:72.51:291,0,73	0/1:55,6:61:23.52:24,0,1216	0/1:37,0:36:14.06:14,0,306	0/0:24,0:24:16.06:0,16,462
chr10	97153504	.	A	ATAGGGG	2030.03	PASS	AB=0.912;AC=23;AF=0.411;AN=56;BaseQRankSum=8.244;DP=533;FS=20.729;HRun=0;HaplotypeScore=222.4301;InbreedingCoeff=-0.3690;MQ=35.31;MQ0=3;MQRankSum=-6.774;QD=5.10;ReadPosRankSum=3.106;VQSLOD=1.2592;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,3:20:11.04:85,11,0	0/1:10,3:13:74.46:105,0,74	0/0:12,0:8:27.08:0,27,526	0/0:13,0:10:30.07:0,30,635	1/1:19,2:21:9.12:30,9,0	0/1:13,2:14:89.37:89,0,147	0/1:20,1:21:70.48:70,0,73	0/0:23,0:22:51.06:0,51,1193	0/1:17,0:17:8.49:8,0,68	0/1:29,6:34:99:609,0,977	0/1:14,8:22:54.39:99,0,54	0/0:15,0:14:3.22:0,3,74	0/1:19,0:18:8.99:9,0,199	0/1:19,0:18:24.15:24,0,36	0/0:16,1:17:4.90:0,5,78	0/1:20,0:20:15.88:16,0,140	0/0:16,0:16:9.48:0,9,211	0/1:13,1:14:70.27:70,0,680	0/1:11,1:12:88.75:89,0,383	1/1:16,6:22:0.47:63,0,0	0/1:21,0:21:33.83:34,0,230	0/1:27,3:30:39.98:40,0,64	0/0:21,3:24:2.42:0,2,101	0/0:15,0:15:5.89:0,6,109	0/1:21,6:27:64.25:257,0,64	0/1:12,3:15:99:181,0,470	0/1:20,2:22:71.21:71,0,492	0/1:12,1:13:70.58:239,0,71
chr10	97153510	.	GCA	G	44.25	PASS	AB=0.992;AC=12;AF=0.214;AN=56;BaseQRankSum=8.708;DP=597;FS=45.963;HRun=0;HaplotypeScore=174.3397;InbreedingCoeff=-0.1772;MQ=39.94;MQ0=3;MQRankSum=-7.959;QD=0.19;ReadPosRankSum=3.763;VQSLOD=1.3256;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,1:24:1.39:0,1,135	0/1:13,0:13:37.65:38,0,52	0/0:18,0:14:42.62:0,43,831	0/0:19,0:15:15.42:0,15,845	1/1:21,0:21:1.82:8,2,0	0/1:18,0:17:4.61:5,0,251	0/1:26,0:26:8.93:9,0,265	0/0:24,0:23:57.55:0,58,1177	0/0:20,0:20:6.20:0,6,75	0/0:37,0:36:12.19:0,12,1089	0/1:23,0:23:17.85:18,0,49	0/0:17,0:16:7.54:0,8,103	0/1:21,0:20:6.51:7,0,266	0/1:21,0:20:25:25,0,148	0/0:19,0:19:8.54:0,9,118	0/1:20,0:22:41.75:42,0,195	0/0:18,0:19:18.46:0,18,315	0/0:19,1:20:4.30:0,4,855	0/0:14,0:14:13.26:0,13,426	0/1:23,0:23:6.37:6,0,97	0/0:22,2:24:20.03:0,20,392	0/0:30,0:30:1.09:0,1,61	0/0:27,0:27:10.67:0,11,232	0/0:15,0:16:4.99:0,5,121	0/1:29,0:29:9.25:9,0,109	0/0:17,0:17:23.11:0,23,556	0/0:22,0:22:32.18:0,32,517	0/1:13,0:13:11.35:11,0,171
chr10	97153514	.	GAGGA	G	41.22	PASS	AB=0.973;AC=10;AF=0.179;AN=56;BaseQRankSum=7.549;DP=634;FS=18.704;HRun=0;HaplotypeScore=190.7317;InbreedingCoeff=-0.0907;MQ=43.23;MQ0=3;MQRankSum=-6.480;QD=0.22;ReadPosRankSum=4.317;VQSLOD=1.6850;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,1:25:7.51:0,8,469	0/1:13,0:13:13.14:13,0,141	0/0:24,0:19:60.18:0,60,1611	0/1:20,1:17:12.54:13,0,1301	1/1:21,0:21:2.75:5,3,0	0/0:18,0:17:10.21:0,10,684	0/1:26,1:27:3.32:3,0,867	0/0:25,0:24:45.75:0,46,1683	0/0:20,0:21:39.28:0,39,637	0/0:37,0:36:64.27:0,64,1687	0/1:23,0:23:24.14:24,0,77	0/0:20,0:19:21.81:0,22,488	0/0:24,0:23:34.87:0,35,955	0/1:22,0:21:12.78:13,0,418	0/0:20,0:20:26.55:0,27,529	0/0:22,0:22:30.09:0,30,635	0/0:21,0:21:32.78:0,33,775	0/0:21,1:22:10.24:0,10,1631	0/1:16,3:17:41.49:41,0,799	0/0:23,0:23:0.07:0,0,215	0/0:30,0:30:43.29:0,43,1115	0/0:30,0:30:5.30:0,5,138	0/0:26,0:26:15.67:0,16,441	0/0:16,0:16:12.04:0,12,277	0/1:29,0:29:19.08:19,0,344	0/0:16,0:19:50.34:0,50,901	0/0:22,0:22:7.98:0,8,721	0/1:14,0:14:39.86:40,0,294
chr10	97153516	.	GGA	G	42.15	PASS	AB=0.903;AC=9;AF=0.161;AN=56;BaseQRankSum=8.494;DP=659;FS=30.698;HRun=0;HaplotypeScore=183.4497;InbreedingCoeff=-0.0674;MQ=43.80;MQ0=3;MQRankSum=-6.745;QD=0.23;ReadPosRankSum=5.140;VQSLOD=1.2234;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:10.19:0,10,373	0/1:12,1:13:3.80:4,0,137	0/0:24,0:20:63.12:0,63,1153	0/0:22,0:18:39.26:0,39,982	1/1:17,4:21:0.45:3,0,0	0/0:18,0:17:6.08:0,6,519	0/0:29,1:30:41.13:0,41,741	0/0:28,1:28:42.60:0,43,1311	0/0:22,1:23:47.10:0,47,612	0/1:35,3:37:47.28:47,0,1126	0/1:22,2:24:22.06:22,0,90	0/0:21,1:21:24.18:0,24,358	0/0:19,4:23:34.17:0,34,682	0/0:20,2:21:0.25:0,0,304	0/0:17,4:21:30.77:0,31,454	0/0:24,0:23:38.04:0,38,519	0/0:23,0:23:36.47:0,36,587	0/0:23,0:23:30.67:0,31,1216	0/0:19,0:17:23.07:0,23,584	0/1:19,3:23:4.72:5,0,140	0/0:29,1:30:42.95:0,43,790	0/0:29,2:31:7.15:0,7,102	0/0:20,6:26:12.57:0,13,302	0/0:17,0:17:15.03:0,15,232	0/1:30,0:30:22.56:23,0,310	0/0:19,0:19:30.96:0,31,646	0/1:21,1:22:9.87:10,0,503	0/1:8,6:14:49.33:49,0,249
chr10	97153771	.	T	TG	838.21	PASS	AB=0.852;AC=12;AF=0.214;AN=56;BaseQRankSum=-1.815;DP=584;FS=8.556;HRun=10;HaplotypeScore=94.5497;InbreedingCoeff=0.3146;MQ=66.24;MQ0=0;MQRankSum=0.968;QD=4.79;ReadPosRankSum=-3.055;VQSLOD=0.4422;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:23,8:31:2.04:231,2,0	0/0:14,0:15:19.99:0,20,153	0/1:15,0:15:8.44:8,0,139	0/1:18,0:17:25.08:26,0,25	0/0:27,0:28:40.84:0,41,317	0/0:18,0:20:46.01:0,46,356	0/0:21,0:23:45.66:0,46,353	0/0:18,0:18:11.93:0,12,98	0/0:18,0:18:40.99:0,41,326	0/0:26,0:26:31.95:0,32,251	0/0:19,0:21:19:0,19,135	0/0:25,0:26:40.93:0,41,320	0/0:17,0:17:26.93:0,27,221	0/1:18,1:20:3.34:3,0,156	0/0:17,0:17:32.94:0,33,271	0/0:21,0:23:55.93:0,56,442	0/0:35,1:37:44.93:0,45,561	0/0:18,0:23:52.13:0,52,374	0/1:11,8:19:5.19:231,0,5	1/1:8,4:12:6.02:64,6,0	0/1:9,8:17:49.71:136,0,50	0/0:28,0:29:52.94:0,53,423	0/0:14,0:14:26.96:0,27,221	0/0:22,0:21:35.93:0,36,295	0/0:17,0:18:35:0,35,277	1/1:10,1:13:8.68:54,9,0	0/1:22,6:28:37.88:233,0,38	0/0:13,0:13:14.91:0,15,123
chr10	97154205	.	CCTT	C	5134.55	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.349;DP=701;FS=3.916;HRun=0;HaplotypeScore=122.9544;InbreedingCoeff=0.9554;MQ=83.49;MQ0=0;MQRankSum=-7.003;QD=39.20;ReadPosRankSum=1.230;VQSLOD=5.7395;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,2803	0/0:15,0:15:42.14:0,42,929	0/0:29,0:29:84.26:0,84,1658	0/0:19,0:19:29.48:0,29,872	0/0:32,0:32:90.25:0,90,1918	0/0:25,0:25:72.23:0,72,1539	0/0:31,0:31:78.26:0,78,1655	0/0:19,0:19:48.15:0,48,967	0/0:26,0:26:78.27:0,78,1742	0/0:26,0:26:75.25:0,75,1623	0/0:17,0:17:51.16:0,51,1095	0/0:28,0:28:81.27:0,81,1769	0/0:35,0:35:99:0,105,2207	0/0:27,0:27:78.27:0,78,1727	0/0:44,0:44:99:0,126,2704	0/0:23,0:23:66.23:0,66,1461	0/0:35,0:35:93.32:0,93,2046	0/0:1,0:1:3.01:0,3,67	1/1:2,22:24:69.06:968,69,0	1/1:1,13:14:39.13:635,39,0	1/1:2,33:35:81.22:1271,81,0	0/0:25,0:25:72.23:0,72,1532	0/0:14,0:14:42.13:0,42,874	0/0:20,0:20:60.21:0,60,1287	0/0:23,0:23:63.22:0,63,1390	1/1:3,28:31:14.23:1168,14,0	1/1:0,27:27:68.79:1092,69,0	0/0:11,0:11:24.08:0,24,536
chr10	97154926	.	G	GGT	5285.84	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=-11.186;DP=890;FS=5.915;HRun=0;HaplotypeScore=152.2497;InbreedingCoeff=0.9935;MQ=67.89;MQ0=2;MQRankSum=-1.241;QD=29.04;ReadPosRankSum=-0.552;VQSLOD=6.1445;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:54:99:0,108,1224	0/0:17,0:17:36.11:0,36,436	0/0:39,0:38:49.82:0,50,530	0/0:37,0:35:51.50:0,52,567	0/0:27,0:27:41.92:0,42,505	0/0:21,0:22:41.96:0,42,486	0/0:29,0:29:60.18:0,60,727	0/0:26,0:27:41.96:0,42,487	0/0:37,0:38:96.12:0,96,1140	0/0:32,0:32:53.96:0,54,674	0/0:22,0:22:45.12:0,45,535	0/0:37,0:39:83.92:0,84,972	0/0:43,0:45:99:0,99,1166	0/0:24,0:24:66.19:0,66,789	0/0:41,0:41:97.56:0,98,1175	0/0:36,0:36:84.23:0,84,997	0/0:26,0:26:64.49:0,64,713	./.	1/1:8,15:23:48.16:768,48,0	1/1:8,20:30:14.72:737,15,0	1/1:18,43:63:42.55:1669,43,0	0/0:41,1:42:26.94:0,27,823	0/0:20,0:21:44.59:0,45,512	0/0:44,0:44:99:0,108,1296	0/0:24,0:24:48.15:0,48,582	1/1:9,29:38:17.47:1242,17,0	1/1:4,24:28:54.18:870,54,0	0/0:18,0:20:54:0,54,630
chr10	97154994	.	GTA	G	404.08	PASS	AB=0.836;AC=5;AF=0.093;AN=54;BaseQRankSum=8.573;DP=829;FS=46.407;HRun=0;HaplotypeScore=198.1395;InbreedingCoeff=-0.1102;MQ=62.03;MQ0=2;MQRankSum=-7.290;QD=3.51;ReadPosRankSum=-1.284;VQSLOD=1.4497;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:75.01:0,75,1273	0/1:7,5:12:99:143,0,262	0/0:32,0:32:90.29:0,90,1635	0/0:38,0:37:93.31:0,93,1708	0/1:16,1:17:3.46:3,0,619	0/0:24,0:24:57.20:0,57,1099	0/0:29,0:29:72.17:0,72,1285	0/0:40,2:42:80.87:0,81,2093	0/0:40,0:40:99:0,114,2085	0/0:41,3:44:0.32:0,0,2054	0/0:21,1:22:5.65:0,6,812	0/0:41,0:41:99:0,108,2006	0/0:35,0:35:93.21:0,93,1750	0/0:22,0:22:57.20:0,57,1077	0/0:38,0:38:99:0,102,1884	0/0:39,0:39:99:0,99,1894	0/0:22,0:22:66.23:0,66,1258	./.	0/0:21,0:21:32.18:0,32,870	0/0:34,0:34:81.25:0,81,1492	0/0:43,0:43:99:0,111,2129	0/0:27,2:29:21.69:0,22,908	0/1:20,3:23:69.08:69,0,696	0/0:39,0:39:99:0,99,1866	0/1:17,9:26:99:283,0,579	0/1:33,4:36:14.56:15,0,1577	0/0:24,0:23:63.20:0,63,1160	0/0:22,0:22:63.22:0,63,1216
chr10	97155072	.	GTGTA	G	1090.88	PASS	AB=0.933;AC=10;AF=0.185;AN=54;BaseQRankSum=12.733;DP=912;FS=70.278;HRun=0;HaplotypeScore=335.3202;InbreedingCoeff=-0.2397;MQ=47.45;MQ0=24;MQRankSum=-7.399;QD=2.55;ReadPosRankSum=-0.947;VQSLOD=-0.5498;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:8.68:0,9,88	0/0:19,0:19:3.44:0,3,407	0/1:51,0:16:21.20:21,0,293	0/1:56,0:28:31.27:31,0,362	0/1:30,2:32:10.45:10,0,665	0/0:24,0:23:42.54:0,43,950	0/0:35,1:36:24.64:0,25,856	0/0:29,0:28:83.85:0,84,1151	0/0:27,0:27:35.91:0,36,1206	0/1:45,2:46:76.41:76,0,1563	0/1:37,3:40:46.60:47,0,425	0/0:35,0:35:63.65:0,64,1508	0/0:45,0:45:87.90:0,88,2087	0/0:28,0:26:45.14:0,45,1069	0/0:41,0:41:84.10:0,84,1797	0/0:42,0:41:44.19:0,44,1629	0/0:18,0:18:54.08:0,54,1100	./.	0/0:10,0:8:17.99:0,18,221	0/1:42,2:44:99:192,0,432	0/0:24,0:22:23.81:0,24,247	0/1:33,3:36:99:124,0,409	0/1:33,2:35:89.80:90,0,688	0/0:39,0:38:69.13:0,69,1480	0/1:28,15:43:99:518,0,683	0/1:40,3:40:99:122,0,911	0/0:26,0:25:11.25:0,11,527	0/0:16,0:16:21.23:0,21,627
chr10	97155152	.	GC	G	4158.48	PASS	AB=1.000;AC=47;AF=0.904;AN=52;BaseQRankSum=7.582;DP=422;FS=10.115;HRun=1;HaplotypeScore=214.9447;InbreedingCoeff=0.4025;MQ=36.76;MQ0=0;MQRankSum=-0.296;QD=10.00;ReadPosRankSum=6.186;VQSLOD=0.8744;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,1:8:3.15:28,3,0	1/1:7,0:7:8.82:54,9,0	./.	0/0:2,0:2:3.01:0,3,32	1/1:14,0:14:17.60:108,18,0	1/1:14,1:15:24.25:142,24,0	1/1:15,2:17:12.32:162,12,0	1/1:33,0:33:48.36:468,48,0	1/1:16,2:18:23.23:202,23,0	1/1:19,1:21:15.40:294,15,0	1/1:12,0:12:5.90:37,6,0	1/1:20,6:26:49.64:325,50,0	1/1:26,4:30:46.41:323,46,0	1/1:14,1:15:11.87:95,12,0	1/1:28,5:33:67.70:411,68,0	1/1:26,6:32:47.84:334,48,0	1/1:5,0:5:8.84:54,9,0	./.	0/1:4,0:4:12.12:26,0,12	1/1:17,0:17:11.82:85,12,0	0/0:2,0:2:3:0,3,25	1/1:16,0:16:8.69:79,9,0	1/1:13,0:13:5.88:36,6,0	1/1:17,0:17:9.68:55,10,0	1/1:20,0:20:25.38:174,25,0	1/1:15,0:15:23.93:223,24,0	1/1:16,2:17:47.06:296,47,0	1/1:10,0:10:23.54:146,24,0
chr10	97155153	.	CT	C	8085.21	PASS	AC=48;AF=1.000;AN=48;BaseQRankSum=5.034;DP=395;FS=0.000;HRun=1;HaplotypeScore=195.2390;InbreedingCoeff=-0.0330;MQ=36.48;MQ0=0;MQRankSum=0.884;QD=20.63;ReadPosRankSum=4.361;VQSLOD=4.8122;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,5:8:1.65:36,2,0	1/1:0,6:6:9.01:108,9,0	./.	./.	1/1:0,13:13:18.05:210,18,0	1/1:1,14:15:24.89:273,25,0	1/1:3,13:16:30.84:322,31,0	1/1:0,31:31:87.27:1118,87,0	1/1:2,15:17:23.86:379,24,0	1/1:3,16:19:42.89:644,43,0	1/1:0,11:11:6.02:71,6,0	1/1:6,18:24:45.37:509,45,0	1/1:5,25:30:46.59:547,47,0	1/1:3,10:13:12.36:202,12,0	1/1:6,27:33:60.95:686,61,0	1/1:7,24:31:42.76:509,43,0	1/1:0,5:5:9.03:108,9,0	./.	1/1:0,3:3:6.02:78,6,0	1/1:0,15:15:12.14:175,12,0	./.	1/1:0,14:14:9.05:168,9,0	1/1:1,12:13:6.02:72,6,0	1/1:0,15:15:11.95:121,12,0	1/1:1,19:20:26.04:353,26,0	1/1:0,14:14:42.13:525,42,0	1/1:2,15:16:46.70:570,47,0	1/1:0,9:9:24.08:300,24,0
chr10	97155156	.	GC	G	8222.86	PASS	AC=48;AF=1.000;AN=48;BaseQRankSum=5.025;DP=385;FS=0.000;HRun=1;HaplotypeScore=191.2427;InbreedingCoeff=-0.0322;MQ=34.06;MQ0=0;MQRankSum=0.014;QD=21.47;ReadPosRankSum=4.120;VQSLOD=4.8341;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,6:7:3:43,3,0	1/1:0,6:6:9.01:108,9,0	./.	./.	1/1:0,13:13:18.05:210,18,0	1/1:2,13:15:27.45:299,27,0	1/1:2,13:15:28:300,28,0	1/1:1,30:31:84.27:1092,84,0	1/1:1,16:17:23.86:382,24,0	1/1:2,16:18:40.06:628,40,0	1/1:0,11:11:6.02:71,6,0	1/1:6,18:24:49.87:543,50,0	1/1:5,24:29:46.81:553,47,0	1/1:1,10:11:12.36:202,12,0	1/1:5,27:32:67.92:723,68,0	1/1:7,23:30:53.72:614,54,0	1/1:0,5:5:9.03:108,9,0	./.	1/1:0,3:3:6.02:78,6,0	1/1:0,15:15:12.14:175,12,0	./.	1/1:0,14:14:9.05:168,9,0	1/1:0,12:12:6.02:72,6,0	1/1:1,14:15:9.91:106,10,0	1/1:1,19:20:26.04:353,26,0	1/1:0,14:14:41.75:481,42,0	1/1:2,15:16:47.89:578,48,0	1/1:0,9:9:27.08:336,27,0
chr10	97155157	.	C	CAG	5913.59	PASS	AB=1.000;AC=49;AF=0.980;AN=50;BaseQRankSum=-2.437;DP=413;FS=0.000;HRun=0;HaplotypeScore=251.8249;InbreedingCoeff=0.2913;MQ=33.70;MQ0=0;MQRankSum=1.464;QD=14.35;ReadPosRankSum=1.798;VQSLOD=3.9945;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,1:7:6.45:62,6,0	1/1:6,0:6:9.37:60,9,0	./.	0/1:1,0:1:0:0,0,0	1/1:16,0:16:20.72:165,21,0	1/1:14,1:15:26.23:213,26,0	1/1:13,1:15:31.13:225,31,0	1/1:34,0:34:83.75:664,84,0	1/1:16,1:17:33.57:217,34,0	1/1:21,1:22:56.85:512,57,0	1/1:12,0:12:8.28:42,8,0	1/1:19,6:25:54.11:474,54,0	1/1:26,4:30:58.34:470,58,0	1/1:13,1:14:14.95:127,15,0	1/1:28,5:33:59.53:556,60,0	1/1:25,6:31:59.17:577,59,0	1/1:5,0:5:8.90:59,9,0	./.	1/1:4,0:4:6.44:46,6,0	1/1:19,0:19:17.19:102,17,0	./.	1/1:15,0:15:19.45:112,19,0	1/1:12,0:12:8.28:43,8,0	1/1:15,0:15:10.25:58,10,0	1/1:21,0:21:31.32:199,31,0	1/1:17,0:17:40.59:315,41,0	1/1:15,2:16:47.72:369,48,0	1/1:9,0:9:26.87:245,27,0
chr10	97171547	.	AGTGTGT	A	72.24	PASS	AB=0.951;AC=7;AF=0.152;AN=46;BaseQRankSum=3.153;DP=547;FS=0.000;HRun=0;HaplotypeScore=109.1333;InbreedingCoeff=0.4191;MQ=71.45;MQ0=21;MQRankSum=-1.392;QD=0.74;ReadPosRankSum=1.902;VQSLOD=1.9402;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:25:2.98:22,3,0	0/0:6,0:6:9.02:0,9,185	./.	./.	0/0:14,0:14:5.99:0,6,48	0/0:16,0:16:18:0,18,339	0/0:26,0:24:9.03:0,9,240	./.	0/0:20,0:20:14.64:0,15,241	0/0:13,0:13:5.98:0,6,55	0/0:8,0:8:2.96:0,3,19	0/0:16,0:16:12.02:0,12,259	0/0:13,0:13:15.05:0,15,199	0/0:18,0:18:21.05:0,21,355	0/0:26,0:25:33.04:0,33,432	0/0:16,0:15:11.99:0,12,183	0/1:24,5:28:12.03:107,0,12	./.	./.	0/1:12,0:11:0:0,0,0	0/0:56,0:54:2.98:0,3,42	0/0:11,0:10:15.04:0,15,356	0/0:10,0:9:12.04:0,12,336	0/0:27,0:27:27.09:0,27,764	0/0:17,0:17:18.02:0,18,433	1/1:14,0:18:3.90:44,4,0	0/1:12,0:12:0.01:0,0,0	0/0:12,0:12:15.01:0,15,276
chr10	97171982	.	TA	T	2208.12	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.981;DP=654;FS=0.000;HRun=10;HaplotypeScore=67.6825;InbreedingCoeff=0.9880;MQ=73.19;MQ0=0;MQRankSum=-1.138;QD=18.87;ReadPosRankSum=1.180;VQSLOD=4.4362;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,1543	0/0:10,0:10:21.06:0,21,232	0/0:13,0:13:36.07:0,36,387	0/0:14,1:14:10.17:0,10,232	0/0:26,0:27:72.63:0,73,779	0/0:26,0:26:63.14:0,63,679	0/0:30,0:30:81.14:0,81,863	0/0:24,0:24:60.15:0,60,650	0/0:14,0:14:39.11:0,39,431	0/0:27,0:27:63.16:0,63,687	0/0:12,0:12:30.08:0,30,332	0/0:14,0:14:36.07:0,36,381	0/0:24,0:24:63.14:0,63,678	0/0:16,0:16:45.11:0,45,491	0/0:23,0:23:57.15:0,57,623	0/0:15,0:15:36.10:0,36,398	0/0:37,0:39:99:0,111,1180	0/0:4,0:35:71.34:0,71,383	1/1:1,14:15:41.95:355,42,0	1/1:1,12:13:35.92:304,36,0	1/1:7,28:35:47.88:644,48,0	0/0:28,0:28:72.11:0,72,766	0/0:21,0:21:54.13:0,54,588	0/0:31,1:32:46.12:0,46,727	0/0:20,0:20:48.12:0,48,531	1/1:3,27:30:27.57:638,28,0	1/1:4,20:24:50.98:443,51,0	0/0:22,0:22:61.03:0,61,656
chr10	97172380	.	CAG	C	267.22	PASS	AB=0.844;AC=13;AF=0.232;AN=56;BaseQRankSum=1.828;DP=428;FS=3.235;HRun=0;HaplotypeScore=70.6557;InbreedingCoeff=-0.2299;MQ=70.77;MQ0=13;MQRankSum=1.742;QD=1.63;ReadPosRankSum=1.877;VQSLOD=1.5463;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:22:32.28:0,32,236	1/1:1,1:2:3.01:34,3,0	0/0:45,1:17:3.01:0,3,42	0/0:65,0:25:5.63:0,6,22	0/1:6,4:11:64.45:64,0,112	0/1:5,1:6:22.15:22,0,126	0/1:17,6:24:69.50:69,0,326	0/0:19,0:19:7.27:0,7,96	0/1:12,1:13:16.08:16,0,192	0/0:9,0:9:11.70:0,12,103	0/0:6,0:6:12.04:0,12,162	0/1:9,1:10:13.12:13,0,244	0/1:8,1:10:16.26:16,0,170	0/0:10,0:10:15.05:0,15,224	0/0:14,0:19:15.49:0,15,172	0/1:9,2:12:64.47:64,0,121	0/1:17,1:18:10.09:10,0,286	0/0:13,0:13:18.06:0,18,277	0/0:10,0:10:11.89:0,12,83	0/0:7,0:7:2.99:0,3,24	0/0:15,0:14:5.96:0,6,45	0/1:12,3:15:75.41:75,0,243	0/1:9,3:12:13.11:13,0,251	0/1:28,3:31:13.13:13,0,247	0/0:2,0:2:6.02:0,6,92	0/0:7,0:7:14.91:0,15,133	0/0:6,0:10:5.94:0,6,44	0/0:2,0:2:2.99:0,3,24
chr10	97172413	.	G	GT	323.92	PASS	AB=0.807;AC=14;AF=0.259;AN=54;BaseQRankSum=6.462;DP=348;FS=0.000;HRun=0;HaplotypeScore=90.6849;InbreedingCoeff=-0.3675;MQ=59.90;MQ0=10;MQRankSum=-5.728;QD=2.09;ReadPosRankSum=1.629;VQSLOD=2.3770;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,1:19:48.76:0,49,466	0/0:1,0:1:3.01:0,3,42	0/0:42,0:11:23:0,23,284	0/0:38,0:12:5.18:0,5,145	0/1:9,6:15:21.17:21,0,219	0/0:6,0:6:18.06:0,18,250	0/0:19,0:19:38.08:0,38,473	0/1:7,1:7:7.61:8,0,220	0/1:9,2:11:19.39:19,0,189	0/1:5,2:7:39.10:39,0,145	0/0:6,3:9:11.52:0,12,135	0/1:8,1:9:37.47:37,0,209	0/1:9,3:12:46.76:47,0,167	0/1:7,6:13:44.82:45,0,191	0/1:10,3:13:97.03:97,0,197	0/1:8,1:9:2.48:2,0,300	0/1:13,3:16:10.54:11,0,411	0/0:9,0:9:22.46:0,22,264	0/0:12,0:12:16.46:0,16,342	0/0:6,0:6:13.57:0,14,143	0/0:7,0:6:3.01:0,3,35	0/0:17,2:19:46.17:0,46,570	0/1:8,3:11:50.75:51,0,256	0/1:16,0:15:9.27:9,0,220	0/0:4,1:5:5.90:0,6,84	0/1:6,3:9:15.57:16,0,191	0/1:2,4:6:29.84:66,0,30	./.
chr10	97172417	.	GGT	G	59.21	PASS	AB=0.802;AC=11;AF=0.204;AN=54;BaseQRankSum=7.283;DP=328;FS=0.000;HRun=0;HaplotypeScore=78.4949;InbreedingCoeff=-0.2760;MQ=60.48;MQ0=8;MQRankSum=-5.933;QD=0.58;ReadPosRankSum=2.599;VQSLOD=1.3829;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,1:19:24.09:0,24,502	0/0:1,0:1:2.84:0,3,14	0/0:37,0:10:8.31:0,8,314	0/0:33,0:11:11.43:0,11,129	0/0:8,5:13:11.12:0,11,295	0/0:5,0:5:15.05:0,15,266	0/0:17,0:17:24.07:0,24,399	0/1:6,1:6:10.15:10,0,132	0/0:9,2:11:1.71:0,2,243	0/1:4,2:6:32.19:32,0,214	0/1:6,3:9:9.91:10,0,161	0/1:7,1:8:21.36:21,0,268	0/1:9,3:12:27.82:28,0,255	0/1:9,4:13:0.84:1,0,184	0/1:9,1:10:7.91:8,0,237	0/1:9,1:10:0.40:0,0,383	0/0:12,3:15:7.75:0,8,552	0/0:10,0:10:24.34:0,24,417	0/0:12,0:12:6.86:0,7,410	0/0:5,0:5:2.82:0,3,104	0/0:8,0:7:5.69:0,6,69	0/0:16,2:18:41.75:0,42,714	0/1:8,3:11:5.66:6,0,334	0/0:16,0:15:6.84:0,7,301	0/0:4,1:5:5.89:0,6,116	0/1:6,3:9:23.23:23,0,266	0/1:3,4:7:45.65:46,0,63	./.
chr10	97172427	.	G	GA	143.81	PASS	AB=0.814;AC=9;AF=0.173;AN=52;BaseQRankSum=5.481;DP=243;FS=8.473;HRun=0;HaplotypeScore=66.6580;InbreedingCoeff=-0.0522;MQ=64.31;MQ0=5;MQRankSum=-1.801;QD=2.61;ReadPosRankSum=2.345;VQSLOD=1.5921;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,1:14:24.04:0,24,333	./.	0/0:22,0:10:14.89:0,15,134	0/0:20,0:9:1.23:0,1,39	0/0:7,4:11:17.73:0,18,243	0/0:4,0:4:9.03:0,9,118	0/0:11,0:11:14.69:0,15,201	0/1:4,0:3:5.03:5,0,30	0/1:8,2:10:3.65:4,0,158	0/1:3,2:5:78.95:79,0,106	0/0:6,2:8:11.18:0,11,137	0/1:7,0:7:1.18:1,0,169	0/1:8,3:11:46.43:46,0,161	0/0:5,4:9:8.20:0,8,93	0/0:7,1:8:13.66:0,14,172	0/0:7,1:8:16.87:0,17,214	0/0:9,2:11:17.93:0,18,245	0/0:8,0:8:21.04:0,21,254	0/0:8,0:8:20.24:0,20,236	1/1:3,0:3:2.37:8,2,0	0/0:6,0:6:5.88:0,6,50	0/0:12,2:14:18:0,18,356	0/0:5,3:8:15.60:0,16,196	0/0:12,0:11:13.76:0,14,167	0/0:3,1:4:5.97:0,6,62	0/1:5,3:8:48.87:49,0,159	0/1:3,4:7:69.17:69,0,71	./.
chr10	97173426	.	AAGGC	A	599.26	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=4.870;DP=363;FS=1.345;HRun=0;HaplotypeScore=64.6947;InbreedingCoeff=0.6935;MQ=69.10;MQ0=1;MQRankSum=2.266;QD=31.54;ReadPosRankSum=2.189;VQSLOD=3.4661;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:24.06:0,24,508	0/0:8,0:8:15.05:0,15,367	0/0:18,0:17:18.16:0,18,457	0/0:20,0:20:27.09:0,27,475	./.	0/0:15,0:15:24.08:0,24,529	0/0:18,0:18:48.12:0,48,995	0/0:21,0:20:51.16:0,51,1022	0/0:11,0:11:27.08:0,27,589	0/0:13,0:13:21.07:0,21,444	0/0:4,0:4:0.89:0,1,2	0/0:16,0:16:36.11:0,36,834	0/0:9,0:9:18.06:0,18,435	0/0:10,0:10:24.08:0,24,587	0/0:12,0:11:27.08:0,27,612	0/0:10,0:10:21.04:0,21,413	0/0:19,0:18:51.15:0,51,1197	1/1:4,15:19:42.14:693,42,0	0/0:6,0:6:6.02:0,6,139	0/0:7,0:7:9.03:0,9,132	0/0:30,0:30:66.14:0,66,1379	0/0:9,0:9:18.06:0,18,347	./.	0/0:25,0:25:60.09:0,60,1290	0/0:4,0:4:6.01:0,6,98	0/0:13,0:13:12.04:0,12,261	0/0:7,0:7:21.07:0,21,513	0/0:15,0:15:33.09:0,33,756
chr10	97175475	.	CCT	C	1779.76	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.418;DP=739;FS=6.850;HRun=0;HaplotypeScore=89.5471;InbreedingCoeff=0.9999;MQ=81.23;MQ0=0;MQRankSum=-3.843;QD=38.69;ReadPosRankSum=2.251;VQSLOD=5.3679;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,46:46:99:1875,129,0	0/0:19,0:19:51.16:0,51,918	0/0:28,0:26:75.01:0,75,1278	0/0:22,0:18:38.34:0,38,636	0/0:32,0:32:84.27:0,84,1514	0/0:22,0:22:60.19:0,60,1052	0/0:30,0:30:87.27:0,87,1560	0/0:34,0:34:93.31:0,93,1711	0/0:22,0:22:66.23:0,66,1225	0/0:31,0:31:90.28:0,90,1561	0/0:21,0:21:63.21:0,63,1119	0/0:24,0:24:66.23:0,66,1219	0/0:31,0:31:90.31:0,90,1667	0/0:27,0:27:78.24:0,78,1376	0/0:32,0:32:93.30:0,93,1662	0/0:22,0:22:66.23:0,66,1226	0/0:31,0:31:90.29:0,90,1653	0/0:21,0:21:60.18:0,60,1090	0/0:26,0:26:69.20:0,69,1166	0/0:23,0:23:69.24:0,69,1259	0/0:37,0:37:99:0,111,1994	0/0:20,0:20:54.15:0,54,941	0/0:21,0:21:60.18:0,60,1055	0/0:31,0:31:90.31:0,90,1637	0/0:24,0:24:72.21:0,72,1296	0/0:18,0:18:54.19:0,54,990	0/0:21,0:21:57.18:0,57,1015	0/0:22,0:22:66.23:0,66,1220
chr10	97177433	.	GGTGT	G	64.34	PASS	AB=0.957;AC=9;AF=0.196;AN=46;BaseQRankSum=1.902;DP=539;FS=2.554;HRun=0;HaplotypeScore=99.1315;InbreedingCoeff=0.1133;MQ=66.58;MQ0=12;MQRankSum=-0.172;QD=0.37;ReadPosRankSum=-0.834;VQSLOD=2.0184;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:6.02:0,6,89	0/0:6,0:6:5.98:0,6,91	./.	./.	./.	0/0:10,0:10:8.98:0,9,115	0/0:29,0:32:17.63:0,18,247	0/0:16,0:14:3.01:0,3,61	0/1:12,0:13:11.85:12,0,169	0/0:16,0:16:12.04:0,12,241	./.	0/0:23,0:23:33.05:0,33,624	0/0:11,0:10:8.99:0,9,161	0/0:17,0:17:9.01:0,9,139	0/0:17,0:17:21.03:0,21,397	0/0:17,0:17:39.09:0,39,652	0/1:27,0:27:51.73:52,0,399	0/0:25,0:25:30.07:0,30,481	./.	1/1:10,6:16:2.97:20,3,0	0/1:40,11:50:6.93:40,0,7	0/0:21,0:21:20.63:0,21,369	0/1:10,0:9:18.05:18,0,191	0/1:37,1:38:17.05:17,0,489	0/0:22,0:22:4.75:0,5,254	0/0:18,0:18:0.47:0,0,1	1/1:14,0:20:2.65:28,3,0	0/0:8,0:8:5.99:0,6,86
chr10	97178615	.	GCT	G	293.74	PASS	AB=0.986;AC=11;AF=0.212;AN=52;BaseQRankSum=4.130;DP=477;FS=7.108;HRun=0;HaplotypeScore=70.2104;InbreedingCoeff=0.1484;MQ=68.49;MQ0=15;MQRankSum=-0.635;QD=1.46;ReadPosRankSum=1.963;VQSLOD=0.3300;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:5.09:108,0,5	./.	1/1:44,0:16:2.04:6,2,0	0/1:52,0:23:3.62:4,0,16	0/1:10,0:10:20.05:20,0,40	0/0:13,0:13:12.03:0,12,161	0/0:26,1:27:2.60:0,3,466	0/0:22,0:24:30.54:0,31,288	0/1:11,0:11:21.37:21,0,125	0/0:11,0:12:16.24:0,16,158	0/0:5,0:4:12.04:0,12,181	0/1:13,0:13:14.15:14,0,188	0/0:8,0:8:3:0,3,25	0/0:17,0:17:9.03:0,9,128	0/1:11,1:12:21.48:21,0,124	0/0:13,0:13:3.01:0,3,46	0/0:12,0:12:15.05:0,15,225	1/1:11,6:17:21.06:229,21,0	0/0:18,0:16:8.26:0,8,86	./.	0/1:22,0:20:0.05:0,0,0	0/0:7,0:7:9.03:0,9,136	0/0:8,0:8:9.03:0,9,137	0/0:20,0:20:27.03:0,27,361	0/0:9,0:9:5.94:0,6,91	0/0:21,0:19:29.90:0,30,306	0/0:20,0:19:1.25:0,1,3	0/0:20,0:20:30.08:0,30,423
chr10	97179040	.	T	TATGGACAGTTATATAC	3894.47	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.038;DP=537;FS=4.042;HRun=0;HaplotypeScore=229.4412;InbreedingCoeff=0.8083;MQ=84.13;MQ0=0;MQRankSum=-6.893;QD=111.27;ReadPosRankSum=0.670;VQSLOD=3.5398;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,12:35:51.18:3894,51,0	0/0:2,0:2:3.01:0,3,144	0/0:14,0:14:39.11:0,39,1394	0/0:23,0:23:60.20:0,60,1894	0/0:20,0:20:60.21:0,60,2665	0/0:10,0:10:30.09:0,30,1228	0/0:24,0:24:69.24:0,69,3058	0/0:22,0:22:63.21:0,63,2083	0/0:17,0:17:48.15:0,48,2181	0/0:18,0:18:45.14:0,45,1740	0/0:15,0:15:45.15:0,45,2056	0/0:21,0:21:60.20:0,60,2730	0/0:23,0:23:63.22:0,63,2802	0/0:13,0:13:39.11:0,39,1514	0/0:29,0:29:84.25:0,84,3231	0/0:18,0:18:51.17:0,51,2189	0/0:40,0:40:99:0,120,5049	0/0:14,0:14:42.11:0,42,1774	0/0:12,0:12:33.10:0,33,1299	0/0:15,0:15:45.15:0,45,1933	0/0:31,0:31:87.25:0,87,3506	0/0:19,0:19:57.18:0,57,2580	0/0:11,0:11:33.11:0,33,1375	0/0:41,0:41:99:0,123,5123	0/0:14,0:14:36.11:0,36,1502	0/0:24,0:24:66.21:0,66,2823	0/0:9,0:8:27.08:0,27,1067	0/0:3,0:3:9.03:0,9,431
chr10	97180567	.	GT	G	1115.34	PASS	AB=0.898;AC=6;AF=0.107;AN=56;BaseQRankSum=8.971;DP=678;FS=3.683;HRun=11;HaplotypeScore=86.3737;InbreedingCoeff=0.6225;MQ=87.92;MQ0=4;MQRankSum=-1.445;QD=10.14;ReadPosRankSum=2.303;VQSLOD=3.2363;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:32:66.39:542,66,0	0/0:5,0:5:8.96:0,9,82	0/0:59,2:40:35.27:0,35,387	0/0:61,0:42:59.91:0,60,512	0/0:20,0:23:53.71:0,54,511	0/0:15,1:16:23.48:0,23,454	0/0:23,0:23:57.11:0,57,592	0/0:24,1:25:29.36:0,29,482	0/1:19,3:22:7.75:8,0,532	0/0:21,0:21:54.14:0,54,576	0/0:14,0:14:38.88:0,39,379	0/0:20,0:20:51.10:0,51,529	0/0:15,0:15:42.11:0,42,447	0/0:24,0:24:60.13:0,60,625	0/0:22,0:23:62.96:0,63,634	0/0:20,0:20:57.14:0,57,608	0/0:30,0:31:90.01:0,90,912	1/1:3,31:34:83.90:690,84,0	0/1:20,2:22:4.35:4,0,365	0/0:25,1:27:50.36:0,50,705	0/0:17,0:17:48.09:0,48,495	0/0:19,3:22:5.85:0,6,422	0/0:14,0:14:9.90:0,10,284	0/0:26,0:26:78.14:0,78,806	0/0:15,0:17:47.76:0,48,461	0/0:26,0:26:65.74:0,66,673	0/0:17,1:18:15.72:0,16,359	0/0:16,0:17:50.95:0,51,518
chr10	97182087	.	CTG	C	5877.51	PASS	AB=0.944;AC=15;AF=0.268;AN=56;BaseQRankSum=12.697;DP=834;FS=9.190;HRun=0;HaplotypeScore=107.2379;InbreedingCoeff=0.9100;MQ=79.39;MQ0=6;MQRankSum=0.565;QD=25.33;ReadPosRankSum=0.920;VQSLOD=5.8529;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,39:44:87.11:1064,87,0	0/0:13,1:14:1.60:0,2,557	0/0:54,0:39:75.12:0,75,1083	0/0:56,0:47:86.15:0,86,1165	0/0:10,0:10:24.08:0,24,396	0/0:21,1:22:13.63:0,14,730	0/0:27,1:28:25.66:0,26,919	0/0:26,0:26:69.24:0,69,1121	0/0:40,0:40:99:0,114,1844	0/0:34,0:34:81.28:0,81,1334	0/0:9,0:9:21.07:0,21,346	0/0:27,0:27:69.24:0,69,1130	0/0:43,0:43:99:0,108,1776	0/0:43,1:44:82.87:0,83,1889	0/0:44,1:45:82.88:0,83,1889	0/0:30,1:31:28.69:0,29,990	0/0:25,1:26:25.69:0,26,952	1/1:2,17:19:48.15:600,48,0	1/1:8,15:23:45.14:562,45,0	1/1:5,17:22:48.15:600,48,0	1/1:10,44:54:99:1576,126,0	0/0:23,0:23:53.53:0,54,818	0/1:16,1:17:0.16:0,0,503	0/0:32,1:34:55.78:0,56,1417	0/0:23,0:22:57.18:0,57,903	1/1:7,22:29:22.65:799,23,0	1/1:5,18:23:54.17:675,54,0	0/0:13,0:13:24.08:0,24,392
chr10	97183404	.	C	CACA	3224.61	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.184;DP=783;FS=3.296;HRun=0;HaplotypeScore=108.6842;InbreedingCoeff=0.9977;MQ=77.85;MQ0=0;MQRankSum=-6.207;QD=48.86;ReadPosRankSum=1.451;VQSLOD=5.4075;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:81.23:1783,81,0	0/0:7,0:7:21.07:0,21,350	0/0:19,0:19:36.16:0,36,732	0/0:30,0:30:78.16:0,78,1152	0/0:15,0:15:42.10:0,42,639	0/0:32,0:32:90.27:0,90,1440	0/0:26,0:26:78.27:0,78,1290	0/0:32,0:32:96.30:0,96,1504	0/0:33,0:33:96.30:0,96,1549	0/0:34,0:34:99:0,99,1580	0/0:20,0:20:60.21:0,60,997	0/0:34,0:34:96.33:0,96,1590	0/0:34,0:34:96.31:0,96,1568	0/0:36,0:36:96.30:0,96,1538	0/0:22,0:22:66.23:0,66,1094	0/0:27,0:27:78.27:0,78,1290	0/0:27,0:27:78.27:0,78,1291	1/1:3,25:29:69.24:1563,69,0	0/0:23,0:23:66.70:0,67,1089	0/0:13,0:13:33.11:0,33,537	0/0:56,0:56:99:0,150,2417	0/0:15,0:15:42.13:0,42,669	0/0:20,0:20:60.19:0,60,970	0/0:47,0:47:99:0,120,1928	0/0:25,0:25:72.25:0,72,1199	0/0:37,0:37:99:0,106,1722	0/0:24,0:24:69.24:0,69,1138	0/0:29,0:29:84.25:0,84,1350
chr10	97183457	.	GA	G	833.15	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.943;DP=782;FS=2.112;HRun=1;HaplotypeScore=84.4940;InbreedingCoeff=0.9968;MQ=75.36;MQ0=0;MQRankSum=-5.397;QD=22.52;ReadPosRankSum=-1.142;VQSLOD=3.4301;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,34:37:99:928,108,0	0/0:10,0:10:27.06:0,27,406	0/0:23,0:22:66.22:0,66,1037	0/0:28,0:27:63.02:0,63,1078	0/0:8,0:8:24.07:0,24,355	0/0:30,0:30:87.30:0,87,1389	0/0:21,0:21:60.20:0,60,955	0/0:41,0:41:99:0,120,1891	0/0:41,0:41:99:0,120,1857	0/0:27,0:27:72.25:0,72,1146	0/0:14,0:14:35.75:0,36,546	0/0:27,0:27:81.28:0,81,1292	0/0:33,0:33:99:0,99,1547	0/0:32,0:32:96.33:0,96,1522	0/0:29,0:29:87.30:0,87,1389	0/0:27,0:27:78.25:0,78,1214	0/0:36,0:36:99:0,105,1679	0/0:26,0:26:72.21:0,72,1103	0/0:29,0:29:87.25:0,87,1308	0/0:21,0:21:63.21:0,63,1004	0/0:63,0:63:99:0,190,2949	0/0:16,0:16:48.16:0,48,754	0/0:16,0:16:45.15:0,45,713	0/0:40,0:40:99:0,114,1796	0/0:26,0:26:78.26:0,78,1221	0/0:36,0:36:99:0,108,1725	0/0:27,0:27:81.28:0,81,1287	0/0:18,0:18:54.18:0,54,863
chr10	97183459	.	GT	G	701.71	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.863;DP=778;FS=1.342;HRun=2;HaplotypeScore=84.2135;InbreedingCoeff=0.9949;MQ=76.43;MQ0=0;MQRankSum=-5.655;QD=18.47;ReadPosRankSum=-0.896;VQSLOD=3.4697;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,34:38:99:797,103,0	0/0:10,0:10:27.08:0,27,387	0/0:21,0:20:60.18:0,60,833	0/0:28,0:27:73.08:0,73,1094	0/0:7,0:7:21.07:0,21,315	0/0:29,0:29:87.29:0,87,1304	0/0:21,0:21:63.15:0,63,897	0/0:41,0:41:99:0,120,1775	0/0:40,0:40:99:0,117,1667	0/0:26,0:26:75.23:0,75,1101	0/0:14,0:14:39.05:0,39,582	0/0:27,0:27:81.27:0,81,1209	0/0:33,0:33:99:0,99,1481	0/0:32,0:32:93.32:0,93,1392	0/0:29,0:29:87.29:0,87,1304	0/0:25,0:25:72.24:0,72,1079	0/0:38,0:38:99:0,111,1625	0/0:26,0:26:66.22:0,66,989	0/0:30,0:30:87.27:0,87,1256	0/0:21,0:21:63.21:0,63,944	0/0:61,0:61:99:0,181,2674	0/0:17,0:17:48.16:0,48,718	0/0:16,0:16:45.14:0,45,653	0/0:40,0:40:99:0,114,1688	0/0:26,0:26:78.25:0,78,1150	0/0:37,0:37:99:0,111,1646	0/0:27,0:27:81.26:0,81,1194	0/0:18,0:18:54.18:0,54,809
chr10	97184199	.	AGT	A	532.69	PASS	AB=0.896;AC=12;AF=0.231;AN=52;BaseQRankSum=3.428;DP=551;FS=4.634;HRun=0;HaplotypeScore=83.8306;InbreedingCoeff=-0.1413;MQ=70.50;MQ0=3;MQRankSum=-0.301;QD=2.56;ReadPosRankSum=0.443;VQSLOD=1.6166;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:5.90:0,6,42	0/0:8,0:8:9.03:0,9,131	./.	./.	0/0:16,0:16:12.61:0,13,179	0/1:19,3:22:36.25:36,0,303	0/1:11,4:15:51.28:51,0,100	0/0:34,0:34:6.02:0,6,78	0/0:15,0:15:15.05:0,15,211	0/0:13,0:12:9.03:0,9,136	0/1:15,0:16:24.14:24,0,62	0/1:20,4:23:99:99,0,405	0/1:11,1:13:27.68:28,0,159	0/0:20,0:20:27.07:0,27,381	0/1:17,1:19:87.12:87,0,196	0/0:10,0:11:3.95:0,4,212	0/0:34,0:35:15.22:0,15,639	1/1:15,3:20:10.07:222,10,0	0/0:10,0:17:23.97:0,24,240	0/0:9,0:9:2.04:0,2,6	0/0:34,0:53:8.74:0,9,62	0/1:16,0:17:43.48:43,0,97	0/1:13,2:15:12.08:12,0,250	0/1:33,2:36:68:68,0,596	0/0:11,0:11:14.79:0,15,192	0/0:22,0:22:33.49:0,33,335	0/0:12,0:15:11.92:0,12,91	0/1:10,1:11:6.12:6,0,260
chr10	97184237	.	T	TGTGTGT	682.24	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=2.215;DP=579;FS=1.067;HRun=0;HaplotypeScore=138.2459;InbreedingCoeff=0.7327;MQ=56.22;MQ0=16;MQRankSum=-1.753;QD=4.37;ReadPosRankSum=-1.249;VQSLOD=2.5877;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:6.02:81,6,0	0/0:5,0:5:8.96:0,9,140	0/0:37,0:20:0.25:0,0,1	0/0:38,0:16:0.47:0,0,1	0/0:14,0:14:12.04:0,12,227	0/0:21,0:21:24.06:0,24,401	0/0:20,0:20:12.04:0,12,205	1/1:27,0:26:0.46:1,0,0	0/0:20,0:20:15.05:0,15,303	0/0:17,0:16:9.03:0,9,183	0/0:7,0:7:6.49:0,6,69	0/0:24,0:23:42.88:0,43,695	0/0:14,0:14:17.98:0,18,232	0/0:18,0:18:20.91:0,21,426	0/0:14,0:12:27.01:0,27,446	0/0:9,0:9:18.03:0,18,294	0/0:38,0:38:48.63:0,49,954	0/0:22,0:23:9.29:0,9,342	1/1:17,0:16:5.15:76,5,0	./.	1/1:46,0:45:5.49:47,5,0	0/0:14,0:15:12.50:0,13,172	0/0:15,0:15:21.07:0,21,405	0/0:41,0:41:54.65:0,55,997	0/0:9,0:9:12.04:0,12,242	1/1:16,1:22:24.06:422,24,0	1/1:12,0:12:8.39:201,8,0	0/0:15,0:15:17.59:0,18,346
chr10	97184279	.	T	TGTAA	2216.52	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.980;DP=669;FS=3.245;HRun=0;HaplotypeScore=122.8279;InbreedingCoeff=0.8885;MQ=57.36;MQ0=6;MQRankSum=-3.433;QD=63.33;ReadPosRankSum=1.405;VQSLOD=5.9311;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:35:90.22:2311,90,0	0/0:3,0:3:6.02:0,6,116	0/0:42,0:15:38.78:0,39,629	0/0:39,0:27:50.52:0,51,1021	0/0:14,0:14:42.14:0,42,776	0/0:23,0:23:63.22:0,63,1182	0/0:29,0:29:77.10:0,77,1544	0/0:50,0:49:99:0,138,2514	0/0:25,0:25:72.25:0,72,1367	0/0:18,0:18:48.16:0,48,865	0/0:9,0:9:21.07:0,21,405	0/0:13,0:13:39.13:0,39,726	0/0:19,0:19:54.19:0,54,1034	0/0:21,0:21:57.20:0,57,1084	0/0:22,0:22:57.17:0,57,1035	0/0:12,0:12:36.12:0,36,685	0/0:48,0:48:99:0,138,2633	0/0:23,0:23:27.11:0,27,961	0/0:25,0:24:63.22:0,63,1206	0/0:8,0:8:15.52:0,16,292	0/0:46,0:46:99:0,105,1913	0/0:19,0:19:51.17:0,51,962	0/0:10,0:10:27.09:0,27,466	0/0:46,0:46:99:0,129,2215	0/0:15,0:15:45.15:0,45,846	0/0:26,0:26:74.28:0,74,1336	0/0:15,0:15:39.12:0,39,689	0/0:14,0:14:42.14:0,42,748
chr10	97184351	.	G	GGT	528.54	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=6.892;DP=658;FS=0.000;HRun=0;HaplotypeScore=92.1606;InbreedingCoeff=0.6854;MQ=57.18;MQ0=5;MQRankSum=-1.085;QD=9.61;ReadPosRankSum=-1.765;VQSLOD=2.6356;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,18:25:38.98:621,39,0	0/0:7,0:7:18.06:0,18,223	0/1:29,0:12:8.14:10,0,8	0/0:26,0:16:8.62:0,9,111	0/0:24,0:24:57.18:0,57,711	0/0:25,0:25:66.21:0,66,823	0/0:31,0:32:78:0,78,894	0/0:22,0:22:41.83:0,42,434	0/0:14,0:14:39.05:0,39,453	0/0:24,0:25:57.01:0,57,687	0/0:18,0:18:48.12:0,48,581	0/0:24,0:24:63.14:0,63,756	0/0:19,0:19:51.16:0,51,637	0/0:17,0:17:48.10:0,48,569	0/0:22,0:24:56.62:0,57,627	0/0:17,0:18:50.95:0,51,586	0/0:46,0:46:99:0,102,1236	0/0:28,0:29:72.04:0,72,856	0/0:28,0:27:48.01:0,48,521	0/0:13,0:13:33.11:0,33,413	0/0:44,0:44:99:0,105,1219	0/0:16,0:16:36.08:0,36,434	0/0:17,0:17:51.16:0,51,632	0/0:46,0:45:99:0,102,1196	0/0:17,0:18:47.91:0,48,531	0/0:26,0:27:66.04:0,66,798	0/0:15,0:15:38.63:0,39,480	0/0:7,0:7:21.04:0,21,243
chr10	97184429	.	G	GTT	622.09	PASS	AB=0.957;AC=3;AF=0.054;AN=56;BaseQRankSum=6.388;DP=583;FS=0.000;HRun=8;HaplotypeScore=93.9597;InbreedingCoeff=0.6425;MQ=62.97;MQ0=8;MQRankSum=-3.939;QD=9.57;ReadPosRankSum=-0.679;VQSLOD=0.1304;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,14:18:46.71:695,47,0	0/0:10,0:9:27.06:0,27,291	0/0:47,0:24:20.83:0,21,306	0/1:43,0:23:33.11:33,0,191	0/0:26,0:26:69.11:0,69,752	0/0:15,0:15:39.10:0,39,432	0/0:19,0:19:39.08:0,39,434	0/0:35,0:35:77.61:0,78,840	0/0:11,0:11:33.07:0,33,357	0/0:23,0:23:62.98:0,63,673	0/0:21,0:21:51.10:0,51,552	0/0:16,0:16:36.02:0,36,374	0/0:14,0:14:33.08:0,33,368	0/0:10,0:10:24.06:0,24,262	0/0:21,0:21:46.53:0,47,509	0/0:17,0:17:45.11:0,45,492	0/0:31,0:31:90.22:0,90,989	0/0:28,0:26:66.04:0,66,705	0/0:26,0:25:56.92:0,57,606	0/0:22,0:22:54.14:0,54,600	0/0:11,0:11:24.06:0,24,264	0/0:14,0:14:33.07:0,33,366	0/0:14,0:14:29.74:0,30,311	0/0:15,0:15:36.07:0,36,390	0/0:20,0:20:51.12:0,51,567	0/0:23,0:23:66.11:0,66,719	0/0:19,0:19:36:0,36,400	0/0:10,0:10:30.08:0,30,334
chr10	97184456	.	TTG	T	739.81	PASS	AB=0.993;AC=6;AF=0.107;AN=56;BaseQRankSum=7.780;DP=630;FS=2.000;HRun=0;HaplotypeScore=96.6824;InbreedingCoeff=0.6280;MQ=57.35;MQ0=21;MQRankSum=-5.618;QD=4.51;ReadPosRankSum=-3.415;VQSLOD=1.5783;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:16:19.26:181,19,0	0/0:10,0:9:14.27:0,14,316	0/1:53,0:11:9.81:10,0,130	0/1:64,1:23:11.63:12,0,186	0/0:35,0:35:99:0,100,1334	0/0:15,0:15:45.06:0,45,659	0/0:16,0:15:42.77:0,43,570	0/0:34,0:34:64.48:0,64,1128	0/0:14,0:14:38.84:0,39,555	0/0:26,0:26:78.21:0,78,1147	0/0:22,0:22:64.02:0,64,877	0/0:15,0:15:45.13:0,45,632	0/0:17,0:17:48.10:0,48,645	0/0:13,0:13:23.40:0,23,388	0/0:18,0:18:51.11:0,51,718	0/0:19,0:18:22.41:0,22,634	0/0:33,0:33:96.05:0,96,1370	1/1:17,10:25:58.53:669,59,0	0/0:27,0:25:49.35:0,49,604	0/0:22,0:22:59.41:0,59,519	0/0:8,0:6:12.01:0,12,110	0/0:19,0:18:51.13:0,51,739	0/0:14,0:14:38.78:0,39,579	0/0:8,0:8:21.05:0,21,314	0/0:25,0:24:71.44:0,71,1051	0/0:21,0:20:28.46:0,28,408	0/0:22,0:22:42:0,42,404	0/0:13,0:13:19.12:0,19,494
chr10	97184457	.	TG	T	651.03	PASS	AB=0.979;AC=7;AF=0.125;AN=56;BaseQRankSum=9.108;DP=628;FS=2.489;HRun=1;HaplotypeScore=88.0876;InbreedingCoeff=0.5321;MQ=57.45;MQ0=21;MQRankSum=-2.200;QD=3.85;ReadPosRankSum=-2.620;VQSLOD=-0.5793;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,2:15:27.79:200,28,0	0/1:9,0:8:1.55:2,0,221	0/1:51,1:11:13.85:14,0,73	0/1:59,3:23:26.30:26,0,131	0/0:35,0:35:87.34:0,87,1006	0/0:15,0:15:42.18:0,42,481	0/0:16,0:15:42.32:0,42,443	0/0:35,0:35:65.01:0,65,913	0/0:14,0:14:34.22:0,34,419	0/0:30,0:30:72.62:0,73,867	0/0:22,0:23:52.78:0,53,666	0/0:15,0:15:45.06:0,45,472	0/0:17,0:17:47.99:0,48,491	0/0:12,0:12:7.62:0,8,279	0/0:18,0:18:50.73:0,51,544	0/0:18,0:17:23.19:0,23,473	0/0:33,0:33:87.31:0,87,1036	1/1:25,0:23:62.16:545,62,0	0/0:27,0:25:28.91:0,29,392	0/0:22,0:22:43.83:0,44,323	0/0:8,0:6:11.52:0,12,61	0/0:19,0:18:51.11:0,51,580	0/0:13,0:13:35.33:0,35,432	0/0:8,0:8:21.01:0,21,232	0/0:25,0:24:54.41:0,54,755	0/0:21,0:20:25.76:0,26,234	0/0:22,0:22:39.31:0,39,222	0/0:13,0:13:19.03:0,19,363
chr10	97184458	.	G	GT	1710.53	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-0.308;DP=638;FS=0.954;HRun=10;HaplotypeScore=85.4822;InbreedingCoeff=0.8460;MQ=57.22;MQ0=21;MQRankSum=-1.659;QD=14.25;ReadPosRankSum=-1.854;VQSLOD=3.5515;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:15:5.25:36,5,0	0/0:9,0:8:18.07:0,18,167	0/0:53,0:11:9.32:0,9,59	0/0:65,0:22:0.29:0,0,43	0/0:32,1:34:61.13:0,61,656	0/0:16,0:16:44.89:0,45,362	0/0:16,0:15:3.94:0,4,235	0/0:33,0:34:70.02:0,70,545	0/0:13,0:14:34.91:0,35,269	0/0:31,0:30:71.51:0,72,574	0/0:23,1:24:30.13:0,30,400	0/0:15,0:15:35.85:0,36,287	0/0:17,0:17:15.17:0,15,256	0/0:13,0:13:21.05:0,21,192	0/0:20,0:20:44.51:0,45,354	0/0:18,0:17:46.75:0,47,358	0/0:33,0:33:66.93:0,67,612	0/0:24,0:22:5.65:0,6,28	1/1:12,17:27:23.87:427,24,0	1/1:11,9:21:47.93:477,48,0	1/1:5,4:7:12.03:125,12,0	0/0:19,0:18:50.87:0,51,410	0/0:15,0:15:34.97:0,35,276	0/0:8,0:8:17.96:0,18,146	0/0:24,0:24:67.88:0,68,536	1/1:10,11:20:45.70:504,46,0	1/1:4,19:23:11.42:316,11,0	0/0:13,0:13:28.76:0,29,226
chr10	97184477	.	T	TG	234.27	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.577;DP=665;FS=7.316;HRun=0;HaplotypeScore=91.3991;InbreedingCoeff=0.9198;MQ=62.75;MQ0=18;MQRankSum=-2.778;QD=13.01;ReadPosRankSum=0.584;VQSLOD=4.4483;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,7:15:29.49:329,29,0	0/0:11,0:9:26.51:0,27,276	0/0:59,0:11:22.01:0,22,174	0/0:59,1:18:13.51:0,14,207	0/0:37,0:37:99:0,103,1371	0/0:20,0:20:60.04:0,60,737	0/0:18,0:17:41.18:0,41,576	0/0:32,0:32:80.92:0,81,936	0/0:18,0:18:45.89:0,46,586	0/0:28,0:27:81.14:0,81,1000	0/0:23,0:23:58.88:0,59,808	0/0:15,0:15:45.07:0,45,558	0/0:20,0:20:52.23:0,52,614	0/0:17,0:17:47.07:0,47,549	0/0:18,0:18:54.07:0,54,660	0/0:20,0:19:48.10:0,48,629	0/0:31,0:31:76.29:0,76,1055	0/0:35,0:33:50.70:0,51,352	0/0:20,0:18:38.11:0,38,566	0/0:17,0:17:37.54:0,38,480	0/0:7,0:5:9.01:0,9,104	0/0:23,0:22:58.60:0,59,792	0/0:19,0:19:54.14:0,54,676	0/0:10,0:10:26.05:0,26,286	0/0:28,0:27:76.60:0,77,949	0/0:24,0:23:61.94:0,62,701	0/0:23,0:23:44.86:0,45,434	0/0:14,0:14:42.14:0,42,585
chr10	97184607	.	GCA	G	34.74	PASS	AB=0.916;AC=5;AF=0.089;AN=56;BaseQRankSum=3.156;DP=487;FS=4.629;HRun=0;HaplotypeScore=67.1845;InbreedingCoeff=-0.1302;MQ=63.13;MQ0=9;MQRankSum=1.149;QD=0.43;ReadPosRankSum=-0.180;VQSLOD=1.0140;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:3.35:0,3,9	0/1:2,1:3:26.87:27,0,46	0/1:38,1:22:21.05:21,0,102	0/0:42,0:22:15.07:0,15,197	0/0:15,0:15:24.06:0,24,334	0/0:17,0:17:0.56:0,1,482	0/1:9,1:10:17.26:17,0,264	0/0:22,0:21:39.11:0,39,574	0/0:12,0:12:30.10:0,30,456	0/0:13,0:13:10.13:0,10,390	0/0:16,1:16:0.21:0,0,453	0/1:11,0:11:11.47:11,0,304	0/0:9,0:9:21.05:0,21,303	0/0:11,0:11:10.60:0,11,293	0/0:10,0:10:20.90:0,21,297	0/0:12,0:12:27.09:0,27,419	0/0:22,1:23:5.23:0,5,653	0/0:23,0:23:15.72:0,16,655	0/0:11,0:11:18.01:0,18,234	0/0:10,0:10:21.07:0,21,328	0/0:35,1:36:20.57:0,21,1131	0/0:21,0:21:35.81:0,36,499	0/0:14,0:14:36.01:0,36,526	0/0:17,3:20:0.14:0,0,429	0/0:18,0:16:30.10:0,30,455	0/1:16,1:17:70.20:70,0,359	0/0:15,0:15:19.43:0,19,440	0/0:3,0:3:6.02:0,6,90
chr10	97185926	.	T	TGC	3174.91	PASS	AB=0.789;AC=10;AF=0.185;AN=54;BaseQRankSum=-8.754;DP=733;FS=1.442;HRun=0;HaplotypeScore=98.7724;InbreedingCoeff=0.7994;MQ=59.97;MQ0=9;MQRankSum=1.191;QD=18.90;ReadPosRankSum=3.007;VQSLOD=4.0734;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:50:99:0,126,1369	0/0:7,0:7:20.94:0,21,191	0/1:7,0:4:0.81:1,0,20	./.	0/0:24,0:22:50.89:0,51,531	0/0:14,0:14:39.01:0,39,418	0/0:49,0:50:99:0,132,1364	0/0:16,0:15:36.06:0,36,377	0/0:23,0:23:44.98:0,45,491	0/0:30,0:30:63.03:0,63,650	0/0:16,0:16:29.52:0,30,317	0/0:39,0:39:61.96:0,62,890	0/0:21,0:21:54.02:0,54,594	0/0:27,0:27:63.08:0,63,705	0/0:17,0:17:19.90:0,20,427	0/0:28,0:29:74.88:0,75,794	0/0:32,0:32:68.95:0,69,757	0/0:39,0:38:95.72:0,96,1067	1/1:9,8:14:23.87:220,24,0	0/1:3,8:11:22.69:184,0,23	1/1:20,50:69:45.26:1442,45,0	0/0:16,0:16:41.95:0,42,416	0/0:18,0:18:32.73:0,33,340	0/0:48,0:48:99:0,114,1222	0/0:18,0:18:51.01:0,51,505	1/1:12,24:35:69.31:988,69,0	1/1:5,19:24:18.11:502,18,0	0/0:21,0:21:54.06:0,54,592
chr10	97187875	.	GC	G	1079.41	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.811;DP=423;FS=0.000;HRun=1;HaplotypeScore=49.4181;InbreedingCoeff=0.8909;MQ=93.19;MQ0=0;MQRankSum=-3.422;QD=34.82;ReadPosRankSum=2.959;VQSLOD=3.4577;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:84.28:1174,84,0	0/0:10,0:10:30.10:0,30,465	0/0:18,0:18:38.21:0,38,621	0/0:19,0:19:44.50:0,45,585	0/0:10,0:10:30.05:0,30,414	0/0:15,0:15:45.15:0,45,688	0/0:25,0:25:75.24:0,75,1148	0/0:11,0:11:33.10:0,33,472	0/0:11,0:11:33.11:0,33,515	0/0:16,0:16:48.12:0,48,693	0/0:7,0:7:18.01:0,18,231	0/0:16,0:16:45.12:0,45,657	0/0:12,0:12:36.04:0,36,506	0/0:23,0:23:69.09:0,69,1012	0/0:8,0:8:23.73:0,24,262	0/0:5,0:5:14.99:0,15,185	0/0:20,0:20:60.16:0,60,910	0/0:25,0:25:75.13:0,75,1114	0/0:16,0:16:45.09:0,45,651	0/0:5,0:5:15.04:0,15,201	0/0:36,0:36:99:0,102,1404	0/0:4,0:4:9.03:0,9,138	0/0:6,0:6:15:0,15,162	0/0:26,0:26:78.22:0,78,1183	0/0:16,0:16:41.92:0,42,599	0/0:10,0:10:24.07:0,24,355	0/0:14,0:14:42.07:0,42,603	0/0:8,0:8:24.01:0,24,345
chr10	97189240	.	A	AGTGTGTGT	1690.49	PASS	AB=1.000;AC=10;AF=0.185;AN=54;BaseQRankSum=3.907;DP=365;FS=1.853;HRun=0;HaplotypeScore=101.3183;InbreedingCoeff=0.6164;MQ=68.30;MQ0=8;MQRankSum=-5.940;QD=18.18;ReadPosRankSum=-0.544;VQSLOD=2.2706;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:17:3.01:112,3,0	0/0:5,0:5:12.03:0,12,264	0/0:33,0:18:42.07:0,42,890	0/1:18,0:10:5.59:6,0,251	0/0:12,0:12:18.06:0,18,478	0/0:15,0:15:33.11:0,33,805	0/0:17,0:17:48.63:0,49,1198	0/0:21,0:20:33.11:0,33,863	0/0:4,0:4:10.59:0,11,243	0/0:17,0:17:45.15:0,45,1120	0/0:11,0:11:21.06:0,21,494	0/0:8,0:8:18.06:0,18,450	0/0:7,0:7:18.06:0,18,472	0/0:3,0:3:9.03:0,9,208	0/0:12,0:12:27.08:0,27,561	0/0:4,0:3:9.03:0,9,240	0/0:21,0:21:47.84:0,48,1090	1/1:5,0:10:9.03:249,9,0	1/1:7,0:6:9.01:211,9,0	./.	0/0:6,1:7:0.47:0,0,1	0/0:13,0:13:27.09:0,27,675	0/0:10,0:10:8.59:0,9,232	0/0:10,0:10:21.07:0,21,500	0/0:20,0:19:45.12:0,45,1033	0/1:19,0:19:47.79:807,0,48	1/1:5,16:21:12.04:450,12,0	0/0:11,0:11:30.09:0,30,710
chr10	97189274	.	AGGGAGGGAGGGAGG	A	1573.91	PASS	AB=0.970;AC=16;AF=0.296;AN=54;BaseQRankSum=2.120;DP=274;FS=42.119;HRun=0;HaplotypeScore=87.4474;InbreedingCoeff=-0.4720;MQ=46.54;MQ0=32;MQRankSum=0.543;QD=9.26;ReadPosRankSum=1.588;VQSLOD=-0.2050;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:9:24.72:25,0,96	0/0:2,0:2:5.81:0,6,65	0/0:6,0:4:8.97:0,9,72	0/0:9,0:1:0.47:0,0,1	0/0:7,5:12:5.84:0,6,41	0/1:14,0:13:25.42:25,0,443	0/1:16,0:16:68.78:69,0,751	0/1:8,0:5:15.78:16,0,195	0/1:7,0:6:99:155,0,121	0/1:18,0:14:49.45:49,0,759	0/0:6,2:8:12.03:0,12,275	0/1:6,0:6:78.70:79,0,321	0/1:10,0:8:99:148,0,308	0/1:6,0:5:99:111,0,104	0/1:7,0:7:82.96:83,0,490	0/1:4,0:4:13.27:13,0,102	0/1:14,0:14:99:547,0,400	0/0:10,0:8:10.80:0,11,248	0/1:6,1:5:63.67:64,0,193	0/0:9,0:8:5.69:0,6,67	0/0:10,0:7:1.61:0,2,59	0/0:8,2:9:17.83:0,18,470	./.	0/0:8,0:7:12:0,12,204	0/1:16,0:14:32.12:32,0,802	0/1:7,9:15:99:268,0,159	0/0:13,0:13:3.32:0,3,96	0/1:10,0:6:35.97:36,0,87
chr10	97189838	.	G	GA	2621.99	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-1.628;DP=596;FS=3.393;HRun=9;HaplotypeScore=73.8866;InbreedingCoeff=0.9440;MQ=54.06;MQ0=17;MQRankSum=-4.627;QD=16.19;ReadPosRankSum=-0.851;VQSLOD=3.7997;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,18:27:25.10:503,25,0	0/0:10,0:10:14.62:0,15,129	0/0:40,0:10:13.40:0,13,163	0/0:34,0:8:9.72:0,10,109	0/0:25,0:24:45.88:0,46,409	0/0:19,0:19:41.29:0,41,350	0/0:13,0:12:23.67:0,24,198	0/0:35,0:31:45.55:0,46,442	0/0:18,0:18:37.41:0,37,327	0/0:24,0:24:50.57:0,51,441	0/0:33,1:32:32.49:0,32,489	0/0:17,0:17:7.18:0,7,164	0/0:14,0:14:19.91:0,20,181	0/0:14,0:14:20.86:0,21,182	0/0:14,0:14:17.70:0,18,156	0/0:11,0:10:20.11:0,20,177	0/0:18,0:16:23.92:0,24,208	1/1:12,20:30:24.86:483,25,0	1/1:4,18:22:51.93:531,52,0	1/1:8,16:24:42.73:420,43,0	1/1:5,1:6:9:90,9,0	0/0:16,0:16:23.62:0,24,207	0/0:25,0:25:34.10:0,34,309	0/0:8,0:8:17.95:0,18,156	0/0:36,0:35:55.57:0,56,533	1/1:9,17:25:24.20:448,24,0	1/1:16,8:23:40.05:341,40,0	0/0:9,0:7:11.40:0,11,104
chr10	97190755	.	T	TG	3762.38	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-11.296;DP=637;FS=0.393;HRun=6;HaplotypeScore=65.1801;InbreedingCoeff=0.9987;MQ=88.18;MQ0=0;MQRankSum=-0.683;QD=29.39;ReadPosRankSum=1.051;VQSLOD=4.2841;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:99:0,117,1185	0/0:11,0:11:33.08:0,33,337	0/0:22,0:22:58.11:0,58,551	0/0:27,0:27:75.02:0,75,726	0/0:24,0:24:66.13:0,66,666	0/0:14,0:14:36.08:0,36,367	0/0:20,0:20:57.11:0,57,569	0/0:40,0:40:99:0,99,1006	0/0:15,0:15:30.06:0,30,306	0/0:29,0:29:81.16:0,81,815	0/0:16,0:16:42.09:0,42,423	0/0:16,0:16:39.06:0,39,384	0/0:24,0:24:66.13:0,66,666	0/0:28,0:28:69.15:0,69,704	0/0:24,0:24:63.13:0,63,638	0/0:16,0:16:42.09:0,42,428	0/0:27,0:27:63.11:0,63,633	0/0:24,0:24:72.13:0,72,725	1/1:5,25:30:78.20:939,78,0	1/1:6,18:24:45.14:566,45,0	1/1:3,18:21:48.15:604,48,0	0/0:19,0:19:33.90:0,34,472	0/0:22,0:22:52:0,52,521	0/0:26,0:26:78.15:0,78,782	0/0:18,0:18:48.11:0,48,489	1/1:2,25:27:41.60:824,42,0	1/1:3,23:24:66.05:829,66,0	0/0:8,0:8:21.04:0,21,214
chr10	97192228	.	CGTGTGCGT	C	307.92	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=6.216;DP=664;FS=0.754;HRun=0;HaplotypeScore=174.4852;InbreedingCoeff=0.5339;MQ=62.49;MQ0=14;MQRankSum=0.044;QD=4.67;ReadPosRankSum=-3.253;VQSLOD=1.6560;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,6:35:32.57:319,33,0	0/0:2,0:2:6.02:0,6,262	0/0:32,0:19:12.56:0,13,224	0/0:41,0:23:4.43:0,4,160	0/0:16,0:16:44.74:0,45,845	0/0:17,0:16:29.46:0,29,457	0/0:23,0:23:57.15:0,57,1008	0/0:24,0:22:53.89:0,54,605	0/0:23,0:22:53.78:0,54,1137	0/0:17,0:17:27.73:0,28,869	0/0:20,0:20:38.59:0,39,645	0/0:29,0:29:70.32:0,70,1749	0/0:16,0:15:20.36:0,20,1089	0/0:24,0:24:59.94:0,60,1526	0/0:18,0:17:41.89:0,42,847	0/0:16,0:16:44.69:0,45,874	0/0:32,0:32:86.30:0,86,1903	0/1:30,0:30:94.39:94,0,243	0/0:26,0:23:53.90:0,54,543	0/0:11,0:11:23.88:0,24,255	0/0:68,0:66:99:0,150,2828	0/0:18,0:17:20.04:0,20,348	0/0:17,0:16:33.90:0,34,872	0/0:42,0:42:99:0,104,2939	0/0:18,0:18:39.03:0,39,1230	0/0:18,0:17:44.81:0,45,614	0/0:22,0:22:39.25:0,39,793	0/0:8,0:8:24.01:0,24,703
chr10	97192232	.	TGC	T	296.27	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=8.926;DP=671;FS=21.165;HRun=0;HaplotypeScore=106.6878;InbreedingCoeff=0.1232;MQ=56.47;MQ0=15;MQRankSum=0.547;QD=2.35;ReadPosRankSum=-3.020;VQSLOD=0.0541;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:36:32.77:260,33,0	0/0:3,0:3:8.06:0,8,121	0/0:29,0:16:12.56:0,13,224	0/0:33,0:16:4.61:0,5,160	0/0:16,0:16:25.92:0,26,371	0/0:18,0:16:11.55:0,12,175	0/0:26,0:26:53.68:0,54,561	0/0:23,0:21:56.47:0,56,412	0/0:21,0:20:4.88:0,5,467	0/1:21,0:21:75.65:76,0,400	0/0:20,0:20:27.56:0,28,358	0/0:28,1:29:54.89:0,55,830	0/0:17,0:16:13.44:0,13,451	0/0:23,0:23:18.82:0,19,631	0/0:18,0:17:24.67:0,25,352	0/1:15,0:15:28.36:28,0,333	0/0:33,0:33:34.45:0,34,706	0/0:29,0:29:42.53:0,43,286	0/0:30,0:27:22.38:0,22,309	0/1:11,0:11:25.98:26,0,104	0/0:76,1:75:64.91:0,65,1096	0/0:15,0:14:19.98:0,20,152	0/0:18,0:17:25.45:0,25,356	0/0:40,1:41:36.32:0,36,1017	0/1:22,0:22:33.24:33,0,455	0/0:15,1:15:0:0,0,220	0/1:20,0:20:3.49:3,0,168	0/0:9,0:9:22.65:0,23,266
chr10	97192234	.	CGT	C	863.47	PASS	AB=0.923;AC=23;AF=0.442;AN=52;BaseQRankSum=6.102;DP=682;FS=0.000;HRun=0;HaplotypeScore=106.8186;InbreedingCoeff=-0.2921;MQ=56.31;MQ0=16;MQRankSum=0.576;QD=1.77;ReadPosRankSum=0.765;VQSLOD=2.0041;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:34:2.62:15,3,0	0/0:4,0:4:12:0,12,138	./.	./.	0/1:15,0:16:19.47:19,0,163	0/1:15,5:18:54.14:54,0,77	0/1:21,1:27:17.07:17,0,217	0/0:27,0:25:1.20:0,1,134	0/1:20,1:20:24.85:25,0,243	0/0:22,0:24:20.99:0,21,192	0/0:20,0:20:11.66:0,12,121	0/1:28,2:30:17.73:18,0,532	0/0:17,1:17:3.11:0,3,378	0/0:23,0:23:14.67:0,15,344	0/1:13,4:16:47.90:48,0,161	0/1:14,2:16:56.40:56,0,132	0/1:29,5:34:99:160,0,353	1/1:30,0:30:16.99:86,17,0	1/1:30,0:27:13.56:59,14,0	1/1:12,0:12:5.88:42,6,0	0/1:74,0:72:99:137,0,194	0/0:14,3:16:5.99:0,6,50	0/1:17,0:16:14.75:15,0,178	0/1:35,3:40:83.99:84,0,575	0/1:20,1:22:53.41:53,0,338	0/1:16,0:15:21.54:50,0,22	0/1:20,0:20:20.64:64,0,21	0/1:8,0:9:19.31:19,0,154
chr10	97192270	.	TGTGTGC	T	937.31	PASS	AB=0.989;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.044;DP=614;FS=10.186;HRun=0;HaplotypeScore=140.8406;InbreedingCoeff=0.1857;MQ=54.54;MQ0=9;MQRankSum=-3.314;QD=5.68;ReadPosRankSum=-2.300;VQSLOD=1.4272;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:26:4.90:5,0,142	0/0:9,0:9:26.92:0,27,418	0/0:16,0:4:3.01:0,3,41	0/1:10,0:3:10.02:15,0,10	0/0:11,0:11:32.28:0,32,581	0/0:21,0:21:41.88:0,42,501	0/0:25,0:25:55.80:0,56,834	0/0:26,0:26:60.62:0,61,531	0/0:23,0:22:53.76:0,54,889	0/0:22,0:22:59.60:0,60,949	0/0:13,0:13:20.85:0,21,318	0/0:28,0:28:47.24:0,47,1660	0/0:25,0:25:58.77:0,59,1151	0/0:25,0:25:65.92:0,66,1180	0/0:18,0:18:44.38:0,44,729	0/0:12,0:12:14.91:0,15,526	0/0:30,0:30:78.47:0,78,1508	1/1:3,26:29:23.77:398,24,0	0/1:16,1:16:28.45:207,0,28	0/0:10,0:10:5.96:0,6,65	0/1:65,0:64:99:283,0,751	0/0:15,0:15:26.93:0,27,260	0/0:19,0:18:35.84:0,36,640	0/0:48,0:48:61.25:0,61,2199	0/0:22,0:22:57.10:0,57,1292	0/1:17,0:17:99:161,0,163	0/0:16,0:16:20.88:0,21,214	0/0:15,0:15:41.85:0,42,643
chr10	97192274	.	TGC	T	1877.54	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=2.977;DP=616;FS=3.229;HRun=0;HaplotypeScore=98.7575;InbreedingCoeff=0.7070;MQ=56.00;MQ0=7;MQRankSum=-1.404;QD=10.43;ReadPosRankSum=0.783;VQSLOD=2.9806;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:25.10:0,25,176	0/0:9,0:9:26.88:0,27,278	0/0:16,0:4:2.13:0,2,39	0/1:11,0:4:12.11:12,0,19	0/0:14,0:14:30.01:0,30,319	0/0:21,0:21:26.46:0,26,330	0/0:26,0:26:44.95:0,45,471	0/0:28,0:28:56.09:0,56,447	0/0:20,0:20:35.17:0,35,470	0/0:20,0:20:40.72:0,41,323	0/0:12,0:12:17.74:0,18,131	0/0:29,0:29:32.91:0,33,804	0/0:27,0:27:44.90:0,45,639	0/0:23,0:23:44.62:0,45,474	0/0:18,0:18:26.60:0,27,374	0/0:11,0:11:1.25:0,1,191	0/0:30,0:30:24.82:0,25,618	1/1:29,0:29:23.51:174,24,0	1/1:17,0:16:35.92:330,36,0	1/1:1,10:11:6.02:76,6,0	1/1:57,6:62:80.11:956,80,0	0/0:12,0:12:23.88:0,24,203	0/0:18,0:18:31.52:0,32,362	0/0:48,0:48:43.02:0,43,878	0/0:25,0:25:37.72:0,38,594	1/1:17,0:17:38.94:353,39,0	1/1:2,15:17:2.17:147,2,0	0/1:15,0:15:3.83:4,0,261
chr10	97193535	.	T	TCGA	1439.41	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.850;DP=627;FS=5.401;HRun=0;HaplotypeScore=91.7416;InbreedingCoeff=0.9812;MQ=80.57;MQ0=0;MQRankSum=-3.486;QD=41.13;ReadPosRankSum=-0.536;VQSLOD=4.7724;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,28:35:69.24:1534,69,0	0/0:9,0:9:27.09:0,27,441	0/0:22,0:22:60.17:0,60,894	0/0:15,0:15:33.09:0,33,505	0/0:19,0:19:54.18:0,54,881	0/0:14,0:14:42.13:0,42,653	0/0:35,0:35:93.32:0,93,1506	0/0:25,0:25:66.22:0,66,1069	0/0:30,0:30:87.28:0,87,1397	0/0:27,0:27:78.27:0,78,1271	0/0:13,0:13:30.09:0,30,466	0/0:27,0:27:75.21:0,75,1220	0/0:17,0:17:48.16:0,48,784	0/0:25,0:25:72.25:0,72,1163	0/0:24,0:24:66.23:0,66,1075	0/0:32,0:31:96.33:0,96,1556	0/0:36,0:36:99:0,102,1629	0/0:29,0:29:84.29:0,84,1372	0/0:21,0:21:63.18:0,63,962	0/0:15,0:15:42.13:0,42,662	0/0:45,0:45:99:0,123,2004	0/0:12,0:12:27.09:0,27,441	0/0:17,0:17:48.16:0,48,782	0/0:28,0:28:81.28:0,81,1323	0/0:21,0:21:60.20:0,60,979	0/0:11,0:11:30.10:0,30,489	0/0:18,0:18:54.18:0,54,881	0/0:5,0:5:15.05:0,15,234
chr10	97195205	.	A	AC	1781.16	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=10.615;DP=682;FS=9.495;HRun=0;HaplotypeScore=78.5241;InbreedingCoeff=0.9869;MQ=85.55;MQ0=0;MQRankSum=-3.767;QD=42.41;ReadPosRankSum=1.920;VQSLOD=3.9381;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:42:99:1876,126,0	0/0:7,0:7:21.06:0,21,278	0/0:20,0:20:60.14:0,60,781	0/0:28,0:28:55.38:0,55,757	0/0:19,0:19:57.17:0,57,767	0/0:26,0:26:75.23:0,75,1030	0/0:35,0:35:99:0,105,1448	0/0:33,0:33:96.30:0,96,1311	0/0:30,0:30:87.26:0,87,1174	0/0:21,0:21:60.19:0,60,814	0/0:10,0:10:30.08:0,30,387	0/0:26,0:26:75.19:0,75,991	0/0:23,0:23:66.21:0,66,908	0/0:36,0:36:99:0,105,1434	0/0:21,0:21:63.20:0,63,864	0/0:25,0:25:75.23:0,75,1015	0/0:39,0:39:99:0,117,1593	0/0:40,0:40:99:0,120,1639	0/0:18,0:17:54.18:0,54,751	0/0:10,0:10:30.09:0,30,402	0/0:48,0:48:99:0,144,1967	0/0:14,0:14:39.13:0,39,534	0/0:15,0:15:45.12:0,45,593	0/0:32,0:32:93.29:0,93,1267	0/0:12,0:12:36.11:0,36,489	0/0:26,0:26:78.22:0,78,1041	0/0:20,0:20:57.16:0,57,762	0/0:6,0:6:18.06:0,18,252
chr10	97195875	.	GTGAATGAATGAA	G	775.26	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.102;DP=677;FS=13.550;HRun=0;HaplotypeScore=215.1051;InbreedingCoeff=0.8771;MQ=63.19;MQ0=3;MQRankSum=-5.056;QD=22.80;ReadPosRankSum=1.583;VQSLOD=1.7192;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,26:34:27.01:869,27,0	0/0:12,0:12:36.09:0,36,1404	0/0:14,0:12:12.01:0,12,259	0/0:10,0:8:6:0,6,132	0/0:30,0:30:69.21:0,69,3316	0/0:20,0:20:51.15:0,51,2316	0/0:26,0:26:66.21:0,66,2989	0/0:19,0:19:33.07:0,33,706	0/0:30,0:30:66.17:0,66,2877	0/0:34,0:34:92.64:0,93,4243	0/0:21,0:21:51.11:0,51,1959	0/0:26,0:26:66.19:0,66,2982	0/0:32,0:32:75.24:0,75,3337	0/0:24,0:24:72.22:0,72,2700	0/0:23,0:23:66.18:0,66,2919	0/0:21,0:21:57.18:0,57,2548	0/0:29,0:29:72.23:0,72,3793	0/0:18,0:18:51.15:0,51,2619	0/0:29,0:26:57.06:0,57,1971	0/0:25,0:25:57.19:0,57,2692	0/0:36,0:36:99:0,105,5216	0/0:30,0:30:75.22:0,75,3566	0/0:19,0:20:51.14:0,51,2163	0/0:27,0:27:75.18:0,75,3212	0/0:21,0:21:63.19:0,63,3063	0/0:30,0:30:81.23:0,81,3821	0/0:25,0:25:63:0,63,2450	0/0:11,0:11:24.07:0,24,732
chr10	97196606	.	A	ACCCTCCTCCCCGTCT	1541.08	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.063;DP=717;FS=15.571;HRun=0;HaplotypeScore=275.8369;InbreedingCoeff=0.9693;MQ=72.28;MQ0=1;MQRankSum=-4.569;QD=34.25;ReadPosRankSum=-3.128;VQSLOD=0.7114;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,23:44:30.10:1636,30,0	0/0:10,0:10:24.03:0,24,917	0/0:18,0:14:14.94:0,15,205	0/0:33,0:28:35.29:0,35,1030	0/0:14,0:14:24.07:0,24,857	0/0:22,0:22:48.03:0,48,1753	0/0:30,0:30:42.10:0,42,1516	0/0:28,0:28:45.15:0,45,1522	0/0:30,0:30:60.19:0,60,2235	0/0:21,0:21:48.16:0,48,1946	0/0:12,0:12:27.01:0,27,1037	0/0:34,0:34:69.23:0,69,2587	0/0:21,0:21:39.13:0,39,1457	0/0:26,0:26:57.18:0,57,2252	0/0:28,0:28:66.17:0,66,2419	0/0:36,0:35:90.24:0,90,3013	0/0:43,0:43:99:0,99,3342	0/0:25,0:25:54.19:0,54,2078	0/0:22,0:22:24.06:0,24,576	0/0:15,0:15:24.07:0,24,830	0/0:61,0:61:99:0,132,4408	0/0:19,0:19:39.12:0,39,1447	0/0:16,0:16:36.11:0,36,1279	0/0:42,0:42:87.26:0,87,2837	0/0:10,0:10:21.05:0,21,768	0/0:33,0:33:87.28:0,87,3175	0/0:13,0:13:33.02:0,33,1088	0/0:10,0:10:27.09:0,27,1130
chr10	97197706	.	TGCATATATAC	T	4771.05	PASS	AB=0.531;AC=7;AF=0.130;AN=54;BaseQRankSum=11.366;DP=459;FS=5.302;HRun=0;HaplotypeScore=136.8011;InbreedingCoeff=0.8269;MQ=66.87;MQ0=1;MQRankSum=-9.568;QD=78.21;ReadPosRankSum=0.261;VQSLOD=4.7542;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.27:0,78,3954	0/0:13,0:13:39.13:0,39,2081	0/0:11,0:8:13.26:0,13,353	0/0:12,0:8:19.22:0,19,527	0/0:24,0:24:72.25:0,72,3835	0/0:10,0:10:30.10:0,30,1343	0/0:17,0:17:48.16:0,48,2327	0/0:26,0:26:78.27:0,78,3719	0/0:16,0:16:48.15:0,48,2420	0/0:19,0:19:57.20:0,57,2942	0/0:24,0:24:69.24:0,69,3659	0/0:12,0:12:36.12:0,36,1910	0/0:16,0:16:48.15:0,48,2247	0/0:13,0:13:39.12:0,39,1890	0/0:14,0:14:42.14:0,42,2174	0/0:10,0:10:30.10:0,30,1648	0/0:24,0:24:72.20:0,72,3547	0/0:28,0:28:84.25:0,84,4173	1/1:0,13:13:35.92:755,36,0	1/1:0,16:16:42.14:1386,42,0	./.	0/0:9,0:9:27.09:0,27,1435	0/0:15,0:15:45.14:0,45,2265	0/0:14,0:14:42.13:0,42,1875	0/0:22,0:22:66.23:0,66,3514	0/1:2,15:17:99:1381,0,279	1/1:0,15:15:35.78:1249,36,0	0/0:15,0:15:42.04:0,42,1475
chr10	97197801	.	AAT	A	612.78	PASS	AB=0.929;AC=7;AF=0.125;AN=56;BaseQRankSum=6.336;DP=363;FS=8.404;HRun=0;HaplotypeScore=46.7036;InbreedingCoeff=0.1506;MQ=81.78;MQ0=4;MQRankSum=-1.002;QD=8.17;ReadPosRankSum=1.642;VQSLOD=1.7493;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:12.90:0,13,559	0/0:7,0:7:18.06:0,18,294	0/0:15,0:11:1.83:0,2,4	0/0:23,0:14:5.97:0,6,34	0/0:14,0:14:27.07:0,27,413	0/0:17,0:17:36.12:0,36,550	0/0:5,0:6:9.03:0,9,119	0/0:33,0:33:63.21:0,63,1002	0/1:12,1:13:6.84:7,0,402	0/0:15,0:15:39.13:0,39,630	0/0:13,0:13:33.11:0,33,535	0/0:7,0:7:15.05:0,15,245	0/0:6,0:6:18.06:0,18,294	0/1:7,0:7:24.07:24,0,135	0/0:12,0:12:33.11:0,33,538	0/1:6,1:7:21.88:22,0,179	0/0:30,1:31:33.43:0,33,1023	1/1:5,20:24:54.17:665,54,0	0/0:13,0:13:18.06:0,18,289	0/0:4,0:4:6.02:0,6,98	0/0:9,0:9:21.07:0,21,330	0/0:4,0:4:3.01:0,3,49	0/0:7,0:7:6.02:0,6,98	0/0:5,0:5:12.04:0,12,196	0/0:17,0:17:39.13:0,39,636	0/1:10,1:11:16.78:17,0,340	0/1:11,1:12:6.83:7,0,410	0/0:12,0:12:24.08:0,24,392
chr10	97198690	.	TAA	T	823.31	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.253;DP=709;FS=4.249;HRun=3;HaplotypeScore=84.0224;InbreedingCoeff=0.9844;MQ=96.54;MQ0=0;MQRankSum=-3.859;QD=37.42;ReadPosRankSum=3.106;VQSLOD=3.3797;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,2608	0/0:5,0:5:15.05:0,15,290	0/0:27,0:27:78.26:0,78,1454	0/0:41,0:41:99:0,120,2140	0/0:41,0:41:99:0,120,2299	0/0:17,0:17:51.17:0,51,969	0/0:23,0:23:69.24:0,69,1327	0/0:37,0:37:99:0,108,2056	0/0:25,0:25:75.26:0,75,1417	0/0:32,0:32:93.32:0,93,1796	0/0:20,0:20:60.21:0,60,1153	0/0:25,0:25:72.25:0,72,1385	0/0:17,0:17:51.17:0,51,978	0/0:36,0:36:99:0,102,1950	0/0:24,0:24:69.24:0,69,1333	0/0:17,0:17:51.17:0,51,986	0/0:40,0:40:99:0,120,2276	1/1:1,21:22:60.20:918,60,0	0/0:20,0:20:60.21:0,60,1156	0/0:23,0:23:66.23:0,66,1264	0/0:30,0:30:90.29:0,90,1652	0/0:24,0:24:72.25:0,72,1391	0/0:16,0:16:48.16:0,48,925	0/0:19,0:18:54.19:0,54,1044	0/0:26,0:25:69.24:0,69,1328	0/0:19,0:19:57.20:0,57,1101	0/0:23,0:23:69.24:0,69,1327	0/0:14,0:14:39.13:0,39,753
chr10	97199907	.	AAC	A	40.66	PASS	AB=0.924;AC=10;AF=0.185;AN=54;BaseQRankSum=0.819;DP=557;FS=10.832;HRun=0;HaplotypeScore=85.1831;InbreedingCoeff=0.0091;MQ=56.69;MQ0=6;MQRankSum=-0.060;QD=0.26;ReadPosRankSum=0.072;VQSLOD=0.3128;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:8.81:0,9,80	0/0:7,0:7:5.86:0,6,38	./.	0/0:36,0:23:0:0,0,0	0/0:11,0:11:3.01:0,3,44	0/0:18,0:18:11.98:0,12,125	0/1:30,0:30:19.48:19,0,120	0/0:18,0:18:2.94:0,3,18	0/0:10,0:10:11.88:0,12,105	1/1:15,0:15:0.08:27,0,0	0/0:10,0:10:3.01:0,3,38	1/1:15,5:20:3:32,3,0	0/0:20,0:19:12.32:0,12,141	0/0:14,0:14:9.03:0,9,132	0/1:17,2:19:17.13:17,0,139	0/1:11,0:11:23.08:23,0,58	0/1:25,3:27:11.21:11,0,154	0/0:18,0:23:27.42:0,27,256	0/0:8,0:7:6.01:0,6,64	0/0:15,0:14:2.64:0,3,17	0/0:37,0:34:8.72:0,9,86	0/0:24,0:24:15.05:0,15,201	0/1:13,3:16:17.76:18,0,93	0/0:30,0:30:17.95:0,18,279	0/1:15,2:17:20.79:21,0,46	0/0:22,0:22:23.61:0,24,205	0/0:19,0:18:18:0,18,210	0/0:9,0:9:6.02:0,6,88
chr10	97201682	.	GGTGTGT	G	724.40	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=4.776;DP=686;FS=4.865;HRun=0;HaplotypeScore=127.5001;InbreedingCoeff=0.8191;MQ=66.53;MQ0=30;MQRankSum=-3.315;QD=5.94;ReadPosRankSum=0.575;VQSLOD=1.5465;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:36:30.05:0,30,710	0/0:9,0:9:12.04:0,12,334	./.	0/0:51,0:22:0:0,0,0	0/0:15,0:15:9.03:0,9,151	0/0:19,0:19:27.09:0,27,790	0/0:35,0:39:34.86:0,35,905	0/0:21,0:17:6.02:0,6,143	0/0:31,0:32:52.50:0,53,1281	0/0:22,0:24:30.10:0,30,800	0/0:19,0:22:29.28:0,29,805	0/0:20,0:20:24.08:0,24,575	0/0:23,0:22:21.05:0,21,523	0/0:21,0:24:21.06:0,21,469	0/0:27,0:27:45.15:0,45,1239	0/0:18,0:20:30.09:0,30,727	0/0:31,0:37:8.57:0,9,1423	0/0:10,0:18:21.07:0,21,417	1/1:19,3:22:14.17:246,14,0	1/1:16,5:21:9.03:183,9,0	1/1:34,10:43:2.92:17,3,0	0/0:12,0:12:18.06:0,18,426	0/0:14,0:14:15.05:0,15,427	0/0:32,0:33:51.16:0,51,1300	0/0:10,0:10:18.06:0,18,473	1/1:12,5:18:15.03:248,15,0	1/1:13,4:17:9.03:183,9,0	0/0:7,0:8:15.02:0,15,281
chr10	97202219	.	T	TTTCC	2633.39	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=-5.656;DP=606;FS=5.855;HRun=0;HaplotypeScore=95.8380;InbreedingCoeff=0.8540;MQ=65.75;MQ0=6;MQRankSum=-0.073;QD=23.72;ReadPosRankSum=-1.451;VQSLOD=2.8876;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:21:11.88:0,12,98	0/0:12,0:12:27.03:0,27,343	./.	0/0:11,0:9:2.98:0,3,22	0/0:14,0:14:15.04:0,15,214	0/0:24,0:23:39.12:0,39,587	0/0:20,0:20:27.03:0,27,351	0/0:22,0:22:6.01:0,6,72	0/0:15,0:15:24.08:0,24,375	0/0:28,0:28:45.12:0,45,643	0/0:21,0:20:33.04:0,33,487	0/0:31,0:31:63.19:0,63,939	0/0:23,0:23:54.18:0,54,842	0/0:21,0:21:48.14:0,48,710	0/0:23,0:23:42.10:0,42,569	0/0:21,0:21:36.06:0,36,514	0/0:29,0:29:44.61:0,45,649	0/0:23,0:23:14.05:0,14,439	1/1:19,0:17:3.01:70,3,0	1/1:21,8:30:24.08:501,24,0	1/1:13,6:19:39.12:795,39,0	0/0:28,0:28:34.68:0,35,631	0/0:20,0:20:21.02:0,21,299	0/0:22,0:22:36.09:0,36,518	0/0:31,0:31:57.16:0,57,841	1/1:11,18:29:51.17:1145,51,0	1/1:7,7:14:12.04:284,12,0	0/0:12,0:12:7.40:0,7,181
chr10	97202332	.	TCATC	T	346.93	PASS	AB=0.577;AC=1;AF=0.018;AN=56;BaseQRankSum=2.619;DP=624;FS=4.529;HRun=0;HaplotypeScore=147.6756;InbreedingCoeff=0.0214;MQ=52.40;MQ0=8;MQRankSum=-1.216;QD=23.13;ReadPosRankSum=-0.710;VQSLOD=2.9474;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:4,11:15:16.67:421,0,17	0/0:6,0:6:18.06:0,18,438	0/0:23,0:15:33.06:0,33,604	0/0:30,0:20:33.08:0,33,576	0/0:16,0:16:42.14:0,42,1034	0/0:32,0:30:76.61:0,77,1787	0/0:23,0:23:60.14:0,60,1356	0/0:30,0:30:69.24:0,69,1629	0/0:27,0:26:60.21:0,60,1461	0/0:29,0:28:72.25:0,72,1702	0/0:13,0:13:27.09:0,27,662	0/0:30,0:30:55.63:0,56,1582	0/0:21,0:19:48.15:0,48,1070	0/0:20,0:20:51.18:0,51,1257	0/0:26,0:26:69.23:0,69,1644	0/0:16,0:15:35.86:0,36,828	0/0:22,0:22:48.34:0,48,1392	0/0:17,0:17:27.09:0,27,662	0/0:16,0:15:21.07:0,21,519	0/0:22,0:22:42.13:0,42,950	0/0:58,0:57:99:0,123,2963	0/0:16,0:16:36.11:0,36,805	0/0:20,0:20:22.16:0,22,813	0/0:24,0:24:65.44:0,65,1531	0/0:17,0:17:48.12:0,48,1107	0/0:28,0:28:72.25:0,72,1761	0/0:15,0:15:33.11:0,33,745	0/0:12,0:12:33.11:0,33,803
chr10	97202467	.	ACCAT	A	4696.09	PASS	AB=0.981;AC=23;AF=0.411;AN=56;BaseQRankSum=13.802;DP=1365;FS=38.678;HRun=0;HaplotypeScore=254.5198;InbreedingCoeff=-0.7049;MQ=43.62;MQ0=74;MQRankSum=-0.387;QD=4.14;ReadPosRankSum=-0.616;VQSLOD=2.5980;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:11:7.67:0,8,30	0/1:24,0:21:57.90:58,0,449	0/0:52,0:10:10.90:0,11,79	0/0:47,0:12:4.64:0,5,89	0/0:44,0:40:51.04:0,51,846	0/1:48,0:33:99:350,0,396	0/0:70,0:66:43.13:0,43,1038	0/1:62,0:47:99:151,0,119	0/1:70,1:51:99:272,0,1070	0/1:60,0:54:99:163,0,1225	0/1:31,0:27:3.68:4,0,372	0/1:61,0:51:99:195,0,1400	0/1:73,0:63:99:111,0,1503	0/1:71,0:62:99:329,0,1207	0/1:62,0:52:99:169,0,1232	0/1:48,0:39:99:225,0,785	0/1:53,0:49:99:444,0,1327	0/1:35,0:31:37.50:365,0,37	0/1:25,0:12:40.23:40,0,90	0/1:29,0:27:28.35:117,0,28	0/1:84,0:69:68.98:503,0,69	0/1:53,0:48:99:137,0,739	0/1:41,0:37:96.16:96,0,559	0/1:75,0:72:99:381,0,1622	0/1:56,0:54:99:192,0,718	0/1:45,0:37:99:168,0,173	0/1:14,0:14:19.90:119,0,20	0/1:4,10:14:68.65:106,0,69
chr10	97202491	.	TCCAC	T	12114.69	PASS	AB=0.912;AC=30;AF=0.536;AN=56;BaseQRankSum=6.454;DP=1356;FS=35.220;HRun=0;HaplotypeScore=220.5240;InbreedingCoeff=-0.5006;MQ=45.39;MQ0=63;MQRankSum=-3.613;QD=10.15;ReadPosRankSum=0.277;VQSLOD=2.7767;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:6:11.77:52,12,0	0/1:26,1:26:99:202,0,560	0/0:57,0:12:1:0,1,178	0/0:48,0:15:0.63:0,1,181	0/1:41,2:40:33.77:34,0,947	0/1:38,11:34:99:665,0,512	0/0:37,20:56:24.22:0,24,1234	0/1:34,23:44:99:413,0,215	0/1:75,8:66:99:478,0,1412	0/1:67,5:65:99:732,0,1209	0/1:27,1:24:57.50:57,0,485	0/1:54,7:51:99:414,0,1654	0/1:60,4:56:99:300,0,1764	0/1:55,7:53:99:659,0,1270	0/1:64,7:61:99:428,0,1457	0/1:46,3:42:99:416,0,914	0/1:52,9:58:99:869,0,1792	1/1:37,11:44:72.07:1064,72,0	0/1:22,0:12:5.58:122,0,6	1/1:26,2:27:64.72:616,65,0	1/1:57,14:63:86.42:1374,86,0	0/1:51,4:49:99:452,0,864	0/1:31,2:29:99:252,0,649	0/1:68,13:80:99:968,0,1901	0/1:49,4:51:99:452,0,1095	0/1:27,3:25:53.73:610,0,54	1/1:13,3:16:35.55:379,36,0	0/1:17,1:18:96.32:106,0,96
chr10	97202492	.	CCA	C	202.70	PASS	AB=0.955;AC=8;AF=0.143;AN=56;BaseQRankSum=14.435;DP=1343;FS=35.886;HRun=0;HaplotypeScore=226.3252;InbreedingCoeff=-0.1841;MQ=45.46;MQ0=63;MQRankSum=-0.536;QD=0.58;ReadPosRankSum=11.098;VQSLOD=0.3033;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,6:6:38.59:39,0,87	0/0:27,0:26:19.14:0,19,667	0/0:55,0:12:33.03:0,33,451	0/0:46,1:15:41.85:0,42,524	0/0:42,0:39:71.42:0,71,1247	0/1:48,0:33:82.26:82,0,579	0/0:56,0:55:68.57:0,69,1349	0/0:54,0:41:85.36:0,85,945	0/0:83,0:66:19.12:0,19,1635	0/0:74,0:67:78.90:0,79,1997	0/0:28,0:24:29.48:0,29,624	0/0:61,0:51:50.90:0,51,1774	0/0:64,0:56:78.74:0,79,1991	0/1:62,1:54:12.42:12,0,1347	0/0:71,0:61:44.63:0,45,1648	0/0:49,0:42:21.35:0,21,1081	0/1:61,0:58:39.41:39,0,1697	0/1:47,0:43:52.30:52,0,434	0/0:20,0:10:4.24:0,4,143	0/0:28,0:27:21.32:0,21,321	0/1:71,1:64:65.13:65,0,412	0/0:55,0:49:40.13:0,40,1317	0/0:33,0:29:17.68:0,18,776	0/0:79,0:78:1.69:0,2,1879	0/0:51,0:49:41.30:0,41,1326	0/1:29,0:24:33.82:34,0,265	0/1:16,0:16:12.03:12,0,161	0/0:18,0:18:10.40:0,10,240
chr10	97202500	.	C	CCA	365.13	PASS	AB=0.936;AC=11;AF=0.196;AN=56;BaseQRankSum=8.401;DP=1284;FS=27.176;HRun=0;HaplotypeScore=234.3546;InbreedingCoeff=-0.0879;MQ=46.60;MQ0=43;MQRankSum=-8.543;QD=0.94;ReadPosRankSum=2.287;VQSLOD=1.3785;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:6:0.91:25,1,0	0/1:18,3:20:10.63:11,0,554	0/0:53,0:15:36.09:0,36,496	0/0:45,1:18:35.78:0,36,564	0/0:30,1:30:66.16:0,66,955	0/0:44,2:34:7.37:0,7,939	0/0:52,0:49:78.16:0,78,1112	0/0:51,1:43:50.45:0,50,1501	0/0:82,2:70:64.61:0,65,1634	0/0:65,0:59:99:0,104,1876	0/0:28,1:27:30.16:0,30,687	0/1:58,5:54:95.36:95,0,1610	0/1:54,5:55:99:148,0,1562	0/0:60,0:52:99:0,113,1530	0/1:77,4:72:68.36:68,0,1485	0/0:45,3:42:81.14:0,81,1092	0/0:66,0:63:99:0,174,2461	0/0:46,1:43:33.72:0,34,1359	0/1:16,2:10:91.71:92,0,173	0/1:24,1:24:4.33:4,0,686	0/0:65,1:62:61.60:0,62,1498	0/1:47,1:44:5.39:5,0,1158	0/0:29,0:28:60.15:0,60,838	0/0:80,0:78:99:0,171,2608	0/1:42,2:43:23.67:24,0,1149	0/0:21,0:17:36.12:0,36,514	0/0:15,0:15:42.06:0,42,567	0/1:18,1:19:30.58:31,0,287
chr10	97202541	.	A	ACCAT	1236.96	PASS	AB=0.947;AC=16;AF=0.320;AN=50;BaseQRankSum=5.832;DP=1184;FS=55.422;HRun=0;HaplotypeScore=192.6653;InbreedingCoeff=-0.4262;MQ=45.04;MQ0=86;MQRankSum=-3.626;QD=1.83;ReadPosRankSum=-2.096;VQSLOD=0.7729;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/1:14,1:13:95.78:96,0,278	./.	./.	0/1:21,1:19:10.90:11,0,328	0/1:32,2:26:70.93:71,0,269	0/0:51,0:37:35.26:0,35,493	0/1:55,0:32:76.26:76,0,95	0/0:58,29:71:77.44:0,77,1268	0/1:54,1:44:90.57:91,0,656	0/1:18,1:19:0.05:0,0,228	0/0:46,0:40:28.30:0,28,1092	0/1:52,1:48:44.27:44,0,1137	0/1:43,0:37:74.67:75,0,713	0/1:50,26:67:99:220,0,727	0/1:42,19:53:4.10:4,0,871	0/1:58,0:56:82.55:83,0,1199	0/1:36,1:33:99:239,0,653	0/1:20,0:12:4.08:4,0,188	0/0:22,0:21:19.16:0,19,441	0/0:99,1:83:73.38:0,73,1404	0/1:27,2:27:74.70:75,0,486	0/0:21,8:21:16.26:0,16,171	0/1:68,0:66:99:206,0,1503	0/0:24,16:39:17.23:0,17,464	0/1:28,0:21:86.10:86,0,453	0/0:21,0:19:38.80:0,39,491	0/0:11,0:11:17.09:0,17,248
chr10	97202629	.	A	ACCAT	1538.16	PASS	AB=0.991;AC=14;AF=0.280;AN=50;BaseQRankSum=5.180;DP=1343;FS=1.587;HRun=0;HaplotypeScore=247.1547;InbreedingCoeff=0.1136;MQ=40.03;MQ0=170;MQRankSum=-3.866;QD=2.62;ReadPosRankSum=0.927;VQSLOD=2.4298;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:24:11.47:0,11,212	1/1:15,0:11:8.44:73,8,0	./.	./.	0/0:42,0:34:27.13:0,27,312	0/0:37,0:26:27.21:0,27,314	0/0:62,0:52:36.85:0,37,800	0/0:59,0:28:14.34:0,14,112	0/0:64,0:55:83.09:0,83,1178	0/1:72,0:44:50.77:51,0,214	./.	0/0:57,0:52:52.80:0,53,760	0/0:49,0:44:41.69:0,42,672	0/1:62,1:52:22.32:410,0,22	0/0:64,0:55:66.79:0,67,777	0/0:38,0:32:15.02:0,15,350	0/1:45,3:42:19.97:250,0,20	0/1:41,0:36:36.24:263,0,36	0/1:54,0:16:61.05:61,0,174	0/0:43,0:30:0.37:0,0,234	0/1:116,0:88:89.99:90,0,509	0/0:46,0:27:31.33:0,31,355	1/1:34,1:25:5.90:83,6,0	1/1:54,2:48:22.90:301,23,0	0/0:44,0:34:25.82:0,26,357	0/1:59,0:39:86.31:86,0,385	0/1:26,0:21:26.49:26,0,171	0/0:8,0:9:6.48:0,6,57
chr10	97202686	.	T	TCATC	1040.55	PASS	AB=0.948;AC=8;AF=0.154;AN=52;BaseQRankSum=-0.882;DP=1373;FS=0.759;HRun=0;HaplotypeScore=242.2257;InbreedingCoeff=0.2265;MQ=40.37;MQ0=155;MQRankSum=-1.563;QD=3.15;ReadPosRankSum=-2.338;VQSLOD=1.7264;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:66,4:51:99:378,0,105	0/0:24,0:20:21.07:0,21,315	./.	./.	0/0:21,0:18:15.04:0,15,208	0/0:45,0:31:27.41:0,27,653	0/1:89,1:69:99:130,0,641	1/1:77,0:40:0.47:1,0,0	0/0:71,0:52:51.13:0,51,732	0/0:57,0:38:45.15:0,45,687	0/0:24,0:18:21.07:0,21,308	0/0:64,0:51:57.18:0,57,854	0/0:66,0:52:78.62:0,79,1163	0/0:56,0:41:60.19:0,60,891	0/0:62,0:55:50.91:0,51,742	0/0:55,0:35:54.18:0,54,817	0/0:52,0:46:64.26:0,64,982	0/1:37,4:30:99:331,0,282	0/0:32,0:17:12.01:0,12,141	0/0:33,0:25:24.08:0,24,351	0/0:101,0:71:80.58:0,81,1151	0/0:34,0:27:30.03:0,30,461	0/0:24,0:18:14.72:0,15,231	0/0:66,0:61:83:0,83,1204	0/1:33,2:30:99:193,0,121	0/0:32,0:20:14.98:0,15,231	0/0:30,0:26:24.01:0,24,538	1/1:12,5:12:5.96:128,6,0
chr10	97202761	.	ACCAT	A	4709.92	PASS	AB=1.000;AC=23;AF=0.460;AN=50;BaseQRankSum=0.374;DP=1089;FS=1.371;HRun=0;HaplotypeScore=167.3212;InbreedingCoeff=0.8825;MQ=49.54;MQ0=114;MQRankSum=2.698;QD=10.40;ReadPosRankSum=-0.677;VQSLOD=4.3711;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:39:11.45:11,0,180	1/1:19,0:16:18.02:190,18,0	./.	./.	1/1:12,7:16:14.72:107,15,0	0/0:29,0:22:30.03:0,30,488	0/0:55,0:45:40.21:0,40,620	./.	1/1:54,6:48:84.19:1136,84,0	0/0:56,0:40:48.01:0,48,808	0/0:18,0:17:12.04:0,12,244	0/0:50,0:47:60.17:0,60,1113	0/0:36,0:36:41.49:0,41,789	0/0:41,0:39:59.90:0,60,1139	0/0:40,0:39:48.09:0,48,833	1/1:31,11:32:10.28:181,10,0	1/1:41,5:43:31:628,31,0	0/0:41,0:40:55.70:0,56,940	1/1:30,0:19:20.93:210,21,0	1/1:25,1:23:20.96:236,21,0	1/1:88,2:75:77.89:985,78,0	0/0:30,0:26:29.13:0,29,556	0/0:10,0:8:6.47:0,6,83	0/0:66,0:62:69.60:0,70,1261	0/0:28,0:26:21.07:0,21,349	1/1:32,1:24:36.05:508,36,0	1/1:27,3:28:22.11:381,22,0	1/1:13,0:13:8.85:138,9,0
chr10	97203347	.	T	TGTGTGTGTGG	6053.13	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-2.606;DP=786;FS=0.000;HRun=0;HaplotypeScore=230.5614;InbreedingCoeff=0.7226;MQ=55.05;MQ0=10;MQRankSum=-5.532;QD=28.55;ReadPosRankSum=-2.455;VQSLOD=3.7727;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:7.09:141,0,7	0/0:20,0:20:51.09:0,51,1112	0/0:26,0:9:18.05:0,18,293	0/0:22,0:10:27.05:0,27,505	0/0:28,0:27:71.63:0,72,1362	0/0:20,0:20:57.13:0,57,1346	0/0:34,0:34:90.14:0,90,1788	0/0:40,0:40:84.09:0,84,1358	0/0:32,0:32:75.11:0,75,1583	0/0:36,0:36:99:0,101,2072	0/0:20,0:20:48.08:0,48,1023	0/0:31,0:31:68.49:0,68,1451	0/0:23,0:23:34.11:0,34,1278	0/0:29,0:29:66.21:0,66,1584	0/0:40,0:40:99:0,108,2495	0/0:26,0:25:57.12:0,57,1360	0/0:24,0:23:51.13:0,51,1271	0/1:24,0:24:55.03:55,0,159	1/1:10,13:30:42.88:1000,43,0	1/1:6,10:21:39.05:1467,39,0	1/1:38,0:38:38.87:592,39,0	0/0:36,0:36:96.19:0,96,2197	0/0:23,0:23:57.14:0,57,1373	0/0:38,0:37:90.07:0,90,1886	0/0:26,0:24:63.12:0,63,1447	1/1:6,22:38:68.05:1892,68,0	1/1:4,10:19:26.88:896,27,0	0/1:11,0:11:11.13:11,0,618
chr10	97205931	.	T	TG	1459.62	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.577;DP=780;FS=2.154;HRun=2;HaplotypeScore=71.6288;InbreedingCoeff=0.9997;MQ=87.23;MQ0=0;MQRankSum=-3.575;QD=39.45;ReadPosRankSum=1.083;VQSLOD=4.2206;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:37:99:1555,108,0	0/0:11,0:11:33.09:0,33,396	0/0:28,0:28:78.21:0,78,918	0/0:25,0:25:69.18:0,69,838	0/0:29,0:29:87.26:0,87,1064	0/0:18,0:18:54.17:0,54,669	0/0:27,0:27:72.20:0,72,868	0/0:35,0:35:99:0,102,1256	0/0:25,0:25:72.22:0,72,881	0/0:41,0:41:99:0,117,1434	0/0:16,0:16:45.10:0,45,521	0/0:28,0:28:78.24:0,78,965	0/0:26,0:26:72.17:0,72,852	0/0:21,0:21:63.14:0,63,763	0/0:42,0:42:99:0,117,1425	0/0:33,0:33:99:0,99,1202	0/0:31,0:31:87.27:0,87,1076	0/0:21,0:21:60.17:0,60,729	0/0:34,0:34:93.27:0,93,1129	0/0:33,0:33:96.28:0,96,1167	0/0:27,0:27:81.22:0,81,967	0/0:23,0:23:66.20:0,66,804	0/0:22,0:22:60.16:0,60,720	0/0:29,0:29:81.23:0,81,980	0/0:30,0:30:90.25:0,90,1088	0/0:32,0:32:90.27:0,90,1096	0/0:36,0:36:99:0,99,1213	0/0:20,0:20:54.17:0,54,668
chr10	97209780	.	AGT	A	1050.13	PASS	AB=0.915;AC=34;AF=0.680;AN=50;BaseQRankSum=0.360;DP=540;FS=18.953;HRun=0;HaplotypeScore=81.6481;InbreedingCoeff=0.0473;MQ=53.03;MQ0=13;MQRankSum=1.101;QD=2.52;ReadPosRankSum=1.003;VQSLOD=0.4962;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:0:0,0,0	1/1:7,0:7:3.01:31,3,0	./.	./.	1/1:11,1:12:3.01:32,3,0	0/0:16,0:16:0:0,0,0	0/1:24,5:30:26.12:124,0,26	0/0:34,0:33:1.25:0,1,3	0/1:17,2:19:25.84:26,0,38	1/1:22,0:22:2.37:8,2,0	1/1:16,2:18:3:32,3,0	1/1:22,2:24:14.06:99,14,0	1/1:8,5:13:9.02:96,9,0	0/1:20,0:19:29.49:72,0,29	0/1:13,8:22:18.23:134,0,18	0/1:22,0:20:25.79:26,0,38	1/1:16,5:25:23.56:202,24,0	0/0:15,0:14:1.62:0,2,9	./.	0/1:12,0:13:0:0,0,0	0/1:29,0:26:0:0,0,0	1/1:11,1:11:2.50:9,2,0	1/1:16,2:16:3:31,3,0	1/1:28,7:35:2.16:143,2,0	0/0:11,0:11:2.37:0,2,8	1/1:14,0:17:5.68:28,6,0	1/1:15,0:21:8.52:42,9,0	1/1:11,1:11:3:32,3,0
chr10	97211421	.	T	TTG	655.99	PASS	AB=1.000;AC=20;AF=0.476;AN=42;BaseQRankSum=-0.008;DP=644;FS=2.334;HRun=0;HaplotypeScore=119.5220;InbreedingCoeff=0.4416;MQ=71.13;MQ0=12;MQRankSum=-2.482;QD=2.11;ReadPosRankSum=-1.971;VQSLOD=2.0233;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:36:0:0,0,0	./.	./.	./.	./.	0/1:17,0:17:4.47:4,0,26	1/1:32,0:27:14.99:166,15,0	./.	0/0:20,0:20:5.02:0,5,81	0/0:33,0:33:2.28:0,2,31	0/0:12,0:12:3:0,3,30	0/0:23,0:23:11.05:0,11,101	./.	0/0:17,0:17:6:0,6,56	1/1:16,0:16:9.83:112,10,0	0/0:20,0:23:17.54:0,18,137	0/0:27,0:26:9.02:0,9,95	1/1:23,4:27:26.25:313,26,0	1/1:15,0:13:3.01:38,3,0	0/0:11,4:16:2.97:0,3,26	1/1:50,0:49:3.01:41,3,0	0/1:16,0:16:0:0,0,0	1/1:14,0:14:2.90:16,3,0	0/1:41,0:42:4.86:5,0,140	./.	1/1:31,0:30:2.66:7,3,0	1/1:8,3:14:6.49:88,6,0	0/0:8,0:8:1.84:0,2,12
chr10	97211559	.	A	ATG	1629	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.921;DP=845;FS=7.516;HRun=0;HaplotypeScore=148.6677;InbreedingCoeff=0.9924;MQ=60.17;MQ0=45;MQRankSum=2.475;QD=31.33;ReadPosRankSum=3.256;VQSLOD=5.7624;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,45:51:99:1724,105,0	0/0:10,0:10:27.09:0,27,343	0/0:55,0:27:49.90:0,50,662	0/0:62,0:29:68.56:0,69,792	0/0:15,0:15:36.01:0,36,458	0/0:29,0:29:60.19:0,60,764	0/0:45,0:39:90.56:0,91,1127	0/0:25,0:25:66.18:0,66,802	0/0:26,0:26:57.16:0,57,712	0/0:27,0:27:66.21:0,66,840	0/0:10,0:10:27.07:0,27,330	0/0:31,0:31:60.19:0,60,764	0/0:22,0:22:60.19:0,60,762	0/0:26,0:26:69.19:0,69,865	0/0:25,0:24:60.18:0,60,749	0/0:22,0:22:60.02:0,60,740	0/0:37,0:38:87.13:0,87,1089	0/0:29,0:27:29.41:0,29,714	0/0:19,0:18:42.13:0,42,534	0/0:16,0:16:29.93:0,30,382	0/0:99,0:95:99:0,225,2799	0/0:31,0:30:81.25:0,81,1018	0/0:10,0:10:24.06:0,24,292	0/0:63,0:62:99:0,138,1755	0/0:14,0:14:33.11:0,33,420	0/0:23,0:23:48.15:0,48,611	0/0:9,0:9:27.09:0,27,344	0/0:10,0:10:27.09:0,27,339
chr10	97212652	.	G	GT	738.70	PASS	AB=0.933;AC=3;AF=0.054;AN=56;BaseQRankSum=-6.267;DP=581;FS=2.352;HRun=10;HaplotypeScore=64.4461;InbreedingCoeff=0.6161;MQ=79.10;MQ0=1;MQRankSum=-1.780;QD=13.68;ReadPosRankSum=-0.892;VQSLOD=3.5694;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,33:40:78.20:832,78,0	0/0:6,0:6:17.98:0,18,148	0/0:21,0:17:5.77:0,6,123	0/0:19,0:17:18.43:0,18,115	0/0:28,0:28:55.91:0,56,448	0/0:23,1:24:27.92:0,28,436	0/0:23,0:23:59.61:0,60,479	0/0:23,0:23:23.91:0,24,197	0/0:23,0:23:53.86:0,54,436	0/0:24,0:24:47.88:0,48,394	0/1:13,1:14:8.05:8,0,144	0/0:19,0:19:47.92:0,48,394	0/0:18,0:18:50.94:0,51,419	0/0:20,0:20:41.89:0,42,341	0/0:20,0:20:47.92:0,48,394	0/0:21,0:21:47.91:0,48,392	0/0:30,0:30:74.87:0,75,612	0/0:23,0:23:34.38:0,34,415	0/0:17,0:17:32.43:0,32,255	0/0:13,0:13:20.93:0,21,172	0/0:26,1:27:40.09:0,40,529	0/0:22,0:22:56.86:0,57,456	0/0:18,0:18:32.92:0,33,267	0/0:25,0:25:74.91:0,75,616	0/0:12,0:12:29.93:0,30,243	0/0:11,0:11:17.95:0,18,146	0/0:23,0:24:61.92:0,62,494	0/0:14,0:15:31.97:0,32,252
chr10	97216346	.	T	TGAGAGA	3552.30	PASS	AB=0.866;AC=43;AF=0.827;AN=52;BaseQRankSum=-3.491;DP=639;FS=6.305;HRun=0;HaplotypeScore=148.7221;InbreedingCoeff=0.1201;MQ=68.69;MQ0=14;MQRankSum=-1.146;QD=7.08;ReadPosRankSum=-1.467;VQSLOD=2.0044;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:30:21.78:81,0,22	1/1:2,0:2:6.02:86,6,0	./.	./.	0/0:20,0:26:0.86:0,1,2	1/1:14,4:20:3.90:98,4,0	1/1:23,0:23:11.61:140,12,0	1/1:29,0:29:0.47:1,0,0	0/1:20,0:22:0.83:33,0,1	1/1:20,0:20:18.47:221,18,0	1/1:17,0:16:9.02:138,9,0	0/1:11,7:21:0.03:0,0,0	1/1:21,0:21:12.80:129,13,0	1/1:26,0:26:29.75:457,30,0	1/1:16,1:24:4.60:132,5,0	1/1:6,0:14:5.46:61,5,0	1/1:10,0:22:13.22:171,13,0	0/1:14,0:19:62.75:63,0,160	1/1:15,0:15:6.02:159,6,0	0/0:23,0:23:0.58:0,1,1	1/1:22,0:22:9.03:183,9,0	1/1:23,0:23:20.14:346,20,0	1/1:17,0:16:5.99:87,6,0	1/1:30,0:29:8.62:142,9,0	1/1:16,0:16:17.97:172,18,0	1/1:17,0:17:30.02:342,30,0	1/1:22,0:26:5.79:235,6,0	0/1:18,0:17:48.14:76,0,48
chr10	97217743	.	C	CCCT	1875.44	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.651;DP=536;FS=0.675;HRun=0;HaplotypeScore=86.3488;InbreedingCoeff=0.9941;MQ=75.83;MQ0=0;MQRankSum=-4.774;QD=42.62;ReadPosRankSum=2.389;VQSLOD=5.2084;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,39:44:93.25:1970,93,0	0/0:17,0:17:45.13:0,45,725	0/0:18,0:17:24.90:0,25,487	0/0:17,0:16:41.92:0,42,587	0/0:30,0:30:90.21:0,90,1310	0/0:23,0:23:66.12:0,66,952	0/0:17,0:17:48.11:0,48,702	0/0:21,0:21:51.04:0,51,682	0/0:22,0:22:66.12:0,66,931	0/0:16,0:16:48.03:0,48,770	0/0:11,0:11:23.90:0,24,343	0/0:19,0:19:54.13:0,54,755	0/0:12,0:12:33.02:0,33,427	0/0:11,0:11:30.09:0,30,454	0/0:19,0:19:57.15:0,57,882	0/0:14,0:14:38.88:0,39,526	0/0:24,0:24:72.14:0,72,1009	0/0:18,0:18:48.11:0,48,706	0/0:10,0:10:30.04:0,30,422	0/0:11,0:11:33.06:0,33,450	0/0:25,0:25:57.11:0,57,848	0/0:14,0:14:33.11:0,33,547	0/0:14,0:14:36.11:0,36,573	0/0:15,0:15:38.79:0,39,591	0/0:25,0:25:72.19:0,72,1097	0/0:30,0:30:81.22:0,81,1198	0/0:22,0:22:53.77:0,54,746	0/0:17,0:16:45.09:0,45,623
chr10	97218385	.	CA	C	965.56	PASS	AB=0.835;AC=14;AF=0.250;AN=56;BaseQRankSum=4.111;DP=495;FS=2.126;HRun=13;HaplotypeScore=61.5331;InbreedingCoeff=0.3322;MQ=84.91;MQ0=0;MQRankSum=0.542;QD=5.28;ReadPosRankSum=2.199;VQSLOD=2.0753;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:2,1:20:12.34:0,12,134	0/0:2,0:2:3:0,3,29	0/0:16,0:15:5.21:0,5,59	0/1:21,0:20:3.06:3,0,60	0/0:24,3:29:24.85:0,25,508	0/0:10,1:14:13.82:0,14,269	0/1:19,3:25:16.66:17,0,358	0/0:33,4:38:5.90:0,6,502	0/0:9,0:9:21.03:0,21,201	0/0:17,0:21:31.83:0,32,304	0/1:10,2:13:16.78:17,0,161	0/1:16,3:19:14.88:15,0,331	0/0:13,1:14:17.15:0,17,328	0/0:16,0:17:37.99:0,38,372	0/0:16,1:18:22.97:0,23,364	0/0:18,0:20:19.97:0,20,332	0/0:16,1:19:19.81:0,20,318	0/1:14,3:17:23.75:24,0,261	0/1:6,12:19:11.74:233,0,12	1/1:4,12:17:5.62:196,6,0	1/1:9,10:19:29.76:219,30,0	0/0:13,0:14:39:0,39,368	0/0:11,0:11:30.03:0,30,283	0/0:15,0:17:32.05:0,32,329	0/0:19,2:21:1.04:0,1,301	1/1:5,12:17:9.57:233,10,0	1/1:5,11:16:23.64:175,24,0	0/0:10,0:10:13.76:0,14,106
chr10	97221241	.	G	GACACACAC	284.65	PASS	AB=0.864;AC=4;AF=0.077;AN=52;BaseQRankSum=0.587;DP=583;FS=0.000;HRun=0;HaplotypeScore=154.5641;InbreedingCoeff=0.3358;MQ=62.31;MQ0=16;MQRankSum=-2.842;QD=3.51;ReadPosRankSum=-3.821;VQSLOD=1.5525;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,12:31:12.03:326,12,0	0/0:13,0:13:11.60:0,12,244	./.	./.	0/0:13,0:11:17.08:0,17,380	0/0:14,0:15:17.95:0,18,325	0/0:23,0:25:32.35:0,32,498	0/0:24,0:24:2.09:0,2,18	0/0:14,0:14:12.04:0,12,264	0/0:17,0:21:24.34:0,24,468	0/0:9,0:9:9.03:0,9,217	0/0:17,0:18:21.07:0,21,488	0/0:18,0:21:23.92:0,24,509	0/0:11,0:12:14.96:0,15,355	0/0:16,0:19:11.66:0,12,648	0/0:13,0:14:21.05:0,21,418	0/0:26,0:31:16.53:0,17,1073	0/0:14,0:26:37.18:0,37,257	0/1:21,0:20:51.80:52,0,128	0/0:7,0:11:17.74:0,18,195	0/0:17,0:34:25.12:0,25,336	0/0:15,0:18:36.12:0,36,733	0/0:12,0:12:17.19:0,17,289	0/0:24,0:31:57.57:0,58,1116	0/0:22,0:23:39:0,39,798	0/1:15,0:24:13.82:14,0,294	0/0:7,0:10:14.52:0,15,235	0/0:9,0:11:21.07:0,21,442
chr10	97222980	.	G	GA	2731.84	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.666;DP=682;FS=0.860;HRun=9;HaplotypeScore=69.2486;InbreedingCoeff=0.9910;MQ=72.89;MQ0=0;MQRankSum=0.988;QD=22.21;ReadPosRankSum=-2.228;VQSLOD=3.6168;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,115,979	0/0:6,0:6:18:0,18,156	0/0:17,0:17:26.92:0,27,227	0/0:19,0:18:30.79:0,31,238	0/0:34,0:34:89.96:0,90,781	0/0:21,1:22:23.76:0,24,428	0/0:32,0:32:83.97:0,84,729	0/0:29,0:29:65.95:0,66,572	0/0:15,0:15:35.98:0,36,312	0/0:28,0:29:61.97:0,62,525	0/0:19,0:19:47.95:0,48,410	0/0:18,0:18:38.97:0,39,339	0/0:31,0:31:83.98:0,84,729	0/0:26,0:26:68.96:0,69,595	0/0:18,0:18:47.99:0,48,416	0/0:22,0:22:62.96:0,63,541	0/0:34,0:34:89.87:0,90,763	0/0:29,0:29:71.92:0,72,617	1/1:5,19:24:34.09:594,34,0	1/1:2,20:22:54.15:594,54,0	1/1:4,19:23:25.08:505,25,0	0/0:22,0:22:50.97:0,51,443	0/0:20,0:20:41.96:0,42,365	0/0:29,0:29:74.96:0,75,651	0/0:34,0:36:70.02:0,70,585	1/1:9,20:30:13.88:582,14,0	1/1:3,21:24:57.15:630,57,0	0/0:9,0:9:20.98:0,21,182
chr10	97224329	.	CG	C	1667.31	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.242;DP=684;FS=0.592;HRun=1;HaplotypeScore=65.1108;InbreedingCoeff=0.9989;MQ=91.76;MQ0=0;MQRankSum=-2.996;QD=38.77;ReadPosRankSum=1.449;VQSLOD=4.2831;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,43:43:99:1762,126,0	0/0:11,0:11:33.11:0,33,523	0/0:34,0:34:99:0,102,1609	0/0:22,0:22:60.14:0,60,904	0/0:26,0:26:78.27:0,78,1245	0/0:25,0:25:75.21:0,75,1170	0/0:20,0:20:60.18:0,60,929	0/0:34,0:34:99:0,102,1544	0/0:23,0:23:69.24:0,69,1101	0/0:35,0:35:99:0,102,1601	0/0:21,0:21:63.18:0,63,971	0/0:23,0:23:69.22:0,69,1071	0/0:24,0:24:69.24:0,69,1100	0/0:30,0:30:87.28:0,87,1357	0/0:28,0:28:84.27:0,84,1317	0/0:32,0:32:96.33:0,96,1531	0/0:33,0:33:99:0,99,1576	0/0:16,0:16:45.15:0,45,719	0/0:30,0:30:84.25:0,84,1289	0/0:25,0:25:75.24:0,75,1174	0/0:10,0:10:30.10:0,30,479	0/0:19,0:19:57.15:0,57,882	0/0:18,0:18:51.16:0,51,782	0/0:27,0:26:81.28:0,81,1293	0/0:13,0:13:39.11:0,39,596	0/0:30,0:30:87.27:0,87,1326	0/0:21,0:21:57.16:0,57,863	0/0:11,0:11:33.11:0,33,527
chr10	97225097	.	A	ATG	1198.26	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.209;DP=765;FS=3.447;HRun=0;HaplotypeScore=90.8400;InbreedingCoeff=0.9826;MQ=66.58;MQ0=1;MQRankSum=-0.138;QD=23.50;ReadPosRankSum=1.954;VQSLOD=4.4130;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,38:50:70.83:1293,71,0	0/0:12,0:12:36.03:0,36,416	0/0:27,0:19:18.52:0,19,294	0/0:29,0:26:39.08:0,39,462	0/0:28,0:28:63.19:0,63,757	0/0:25,0:26:57.01:0,57,668	0/0:27,0:27:28.17:0,28,591	0/0:30,0:30:51.12:0,51,578	0/0:20,0:20:51.16:0,51,617	0/0:36,0:36:87.08:0,87,982	0/0:12,0:13:32.93:0,33,377	0/0:25,0:25:63.19:0,63,763	0/0:24,0:24:51.13:0,51,592	0/0:16,0:16:45.11:0,45,522	0/0:33,0:33:81.25:0,81,982	0/0:37,0:37:93.25:0,93,1102	0/0:42,0:42:99:0,102,1221	0/0:24,0:24:57.15:0,57,676	0/0:24,0:23:45.11:0,45,522	0/0:24,0:24:26.20:0,26,545	0/0:50,0:50:99:0,108,1295	0/0:20,0:21:47.98:0,48,560	0/0:27,0:27:62.93:0,63,740	0/0:24,0:26:66.03:0,66,777	0/0:29,0:29:69.18:0,69,821	0/0:25,0:24:50.82:0,51,618	0/0:32,0:32:69.11:0,69,803	0/0:7,0:7:18.06:0,18,218
chr10	97226717	.	G	GAAAC	1874.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.595;DP=702;FS=2.564;HRun=0;HaplotypeScore=111.7072;InbreedingCoeff=0.9954;MQ=82.37;MQ0=0;MQRankSum=-1.298;QD=55.14;ReadPosRankSum=1.099;VQSLOD=4.6438;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:34:75.26:1970,75,0	0/0:10,0:10:30.10:0,30,570	0/0:26,0:26:69.15:0,69,1086	0/0:21,0:21:39.18:0,39,739	0/0:21,0:21:63.22:0,63,1174	0/0:28,0:28:78.27:0,78,1462	0/0:16,0:16:45.14:0,45,808	0/0:38,0:38:99:0,111,2012	0/0:28,0:28:81.22:0,81,1385	0/0:21,0:21:57.16:0,57,1041	0/0:33,0:33:99:0,99,1847	0/0:27,0:27:72.72:0,73,1360	0/0:24,0:24:72.24:0,72,1336	0/0:24,0:24:66.20:0,66,1176	0/0:28,0:28:81.25:0,81,1446	0/0:23,0:23:69.24:0,69,1301	0/0:26,0:26:78.25:0,78,1430	0/0:23,0:23:69.24:0,69,1261	0/0:32,0:32:96.32:0,96,1724	0/0:29,0:29:78.24:0,78,1417	0/0:27,0:27:75.24:0,75,1361	0/0:22,0:22:60.21:0,60,1122	0/0:21,0:21:63.22:0,63,1196	0/0:34,0:34:99:0,102,1862	0/0:24,0:24:66.23:0,66,1253	0/0:19,0:19:57.19:0,57,1053	0/0:36,0:36:99:0,108,2032	0/0:7,0:7:21.07:0,21,397
chr10	97229176	.	G	GC	950.66	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.994;DP=722;FS=10.363;HRun=1;HaplotypeScore=78.0873;InbreedingCoeff=0.9997;MQ=91.86;MQ0=0;MQRankSum=-4.691;QD=21.13;ReadPosRankSum=-0.142;VQSLOD=2.5670;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,13:44:99:1046,109,0	0/0:15,0:15:45.11:0,45,552	0/0:31,0:31:71.83:0,72,909	0/0:29,0:29:77.31:0,77,923	0/0:25,0:25:60.15:0,60,760	0/0:19,0:19:54.10:0,54,663	0/0:26,0:26:75.23:0,75,959	0/0:33,0:33:87.27:0,87,1116	0/0:26,0:26:75.20:0,75,952	0/0:34,0:34:87.22:0,87,1083	0/0:18,0:18:51.17:0,51,662	0/0:26,0:26:75.24:0,75,961	0/0:16,0:16:48.16:0,48,623	0/0:27,0:27:81.26:0,81,1051	0/0:33,0:33:99:0,99,1285	0/0:25,0:25:72.22:0,72,919	0/0:31,0:31:90.29:0,90,1168	0/0:23,0:23:66.21:0,66,857	0/0:21,0:21:60.18:0,60,764	0/0:20,0:20:57.17:0,57,726	0/0:37,0:37:99:0,111,1413	0/0:25,0:25:69.22:0,69,893	0/0:21,0:21:60.14:0,60,743	0/0:23,0:23:69.21:0,69,881	0/0:22,0:22:63.15:0,63,772	0/0:38,0:38:99:0,108,1381	0/0:22,0:22:66.21:0,66,856	0/0:11,0:11:33.11:0,33,428
chr10	97229179	.	AG	A	674.36	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.524;DP=711;FS=9.261;HRun=2;HaplotypeScore=76.8129;InbreedingCoeff=0.9997;MQ=91.99;MQ0=0;MQRankSum=-5.144;QD=15.68;ReadPosRankSum=1.051;VQSLOD=2.7516;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:31,12:42:93.95:769,94,0	0/0:15,0:15:45.14:0,45,655	0/0:28,0:28:78.21:0,78,1102	0/0:31,0:32:87.24:0,87,1187	0/0:21,0:21:57.19:0,57,854	0/0:17,0:17:51.17:0,51,762	0/0:26,0:26:78.22:0,78,1126	0/0:36,0:36:99:0,108,1590	0/0:25,0:25:75.25:0,75,1123	0/0:28,0:28:69.23:0,69,1034	0/0:18,0:18:48.13:0,48,665	0/0:24,0:24:72.24:0,72,1079	0/0:17,0:17:51.14:0,51,724	0/0:28,0:28:84.26:0,84,1235	0/0:34,0:34:99:0,102,1490	0/0:25,0:26:69.22:0,69,1014	0/0:31,0:31:93.30:0,93,1375	0/0:23,0:23:69.23:0,69,1034	0/0:20,0:20:57.19:0,57,852	0/0:20,0:20:57.19:0,57,853	0/0:38,0:38:99:0,114,1686	0/0:25,0:25:75.25:0,75,1123	0/0:20,0:20:51.17:0,51,763	0/0:24,0:24:69.22:0,69,1014	0/0:21,0:21:63.19:0,63,906	0/0:37,0:37:99:0,102,1510	0/0:23,0:23:69.21:0,69,994	0/0:11,0:11:33.11:0,33,495
chr10	97230897	.	C	CT	2153.76	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.749;DP=706;FS=9.715;HRun=0;HaplotypeScore=68.0612;InbreedingCoeff=0.9988;MQ=88.65;MQ0=0;MQRankSum=-5.843;QD=37.13;ReadPosRankSum=1.595;VQSLOD=3.3532;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,58:58:99:2249,147,0	0/0:12,0:12:36.11:0,36,488	0/0:29,0:29:82.14:0,82,1105	0/0:23,0:23:38.72:0,39,804	0/0:23,0:23:69.22:0,69,939	0/0:28,0:28:81.27:0,81,1132	0/0:21,0:21:63.19:0,63,847	0/0:37,0:37:99:0,102,1396	0/0:32,0:31:96.27:0,96,1264	0/0:21,0:21:63.20:0,63,860	0/0:25,0:25:71.78:0,72,950	0/0:23,0:23:66.22:0,66,922	0/0:25,0:25:75.18:0,75,1023	0/0:15,0:15:45.15:0,45,629	0/0:20,0:20:60.20:0,60,838	0/0:26,0:26:75.23:0,75,1013	0/0:19,0:19:57.18:0,57,781	0/0:30,0:30:87.29:0,87,1213	0/0:22,0:22:60.17:0,60,791	0/0:26,0:26:78.21:0,78,1035	0/0:34,0:34:99:0,100,1368	0/0:25,0:25:75.23:0,75,1018	0/0:22,0:22:66.21:0,66,903	0/0:31,0:31:93.30:0,93,1284	0/0:22,0:22:66.21:0,66,905	0/0:24,0:24:72.23:0,72,991	0/0:24,0:23:72.24:0,72,1005	0/0:9,0:9:27.09:0,27,377
chr10	97231434	.	GACC	G	941.11	PASS	AB=0.968;AC=9;AF=0.161;AN=56;BaseQRankSum=11.147;DP=455;FS=9.781;HRun=0;HaplotypeScore=90.1640;InbreedingCoeff=0.3740;MQ=72.88;MQ0=1;MQRankSum=-3.576;QD=6.32;ReadPosRankSum=5.169;VQSLOD=1.0313;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:35:5.83:6,0,89	0/0:8,0:8:15.05:0,15,305	0/0:27,0:18:8.78:0,9,383	0/0:17,0:12:20.05:0,20,225	0/0:14,0:14:33.04:0,33,534	0/0:15,0:15:31.29:0,31,542	0/0:20,0:20:54.02:0,54,1011	0/0:8,0:8:21.01:0,21,227	0/0:13,0:13:11.90:0,12,153	0/0:13,0:13:26.06:0,26,292	0/0:6,0:6:15.02:0,15,288	0/0:8,0:8:20.98:0,21,361	0/0:11,0:11:27.08:0,27,570	0/0:24,0:25:71.96:0,72,1137	0/0:13,0:15:39.12:0,39,878	0/0:21,0:22:60.11:0,60,1076	0/0:15,0:15:24.03:0,24,390	0/1:16,1:17:2.15:155,0,2	0/1:13,0:13:89.43:89,0,95	1/1:11,1:12:34.45:221,34,0	0/1:26,0:25:8.64:175,0,9	0/0:8,0:8:18.06:0,18,374	0/0:20,0:20:58.81:0,59,936	0/0:21,0:21:54.03:0,54,1063	0/0:10,0:12:27.26:0,27,285	0/1:22,2:24:40.52:185,0,41	1/1:20,2:22:4.38:253,4,0	0/0:6,0:6:18.04:0,18,347
chr10	97231435	.	ACCC	A	3581.60	PASS	AB=0.966;AC=15;AF=0.268;AN=56;BaseQRankSum=8.766;DP=454;FS=31.486;HRun=13;HaplotypeScore=82.0723;InbreedingCoeff=0.8515;MQ=72.77;MQ0=1;MQRankSum=-0.975;QD=20.24;ReadPosRankSum=4.443;VQSLOD=0.2460;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,1:35:76.53:482,77,0	0/0:5,0:8:15.04:0,15,224	0/1:27,1:18:7.84:8,0,192	0/0:17,0:12:11.93:0,12,124	0/0:14,0:14:18.04:0,18,311	0/0:13,0:14:23.08:0,23,366	0/0:20,0:20:39.12:0,39,703	0/0:8,0:8:6.02:0,6,90	0/0:3,0:12:6.37:0,6,68	0/0:10,0:10:8.02:0,8,86	0/0:6,0:6:12.04:0,12,229	0/0:8,0:9:16.30:0,16,278	0/0:11,0:11:24.08:0,24,434	0/0:24,0:24:45:0,45,734	0/0:15,0:15:36.12:0,36,674	0/0:20,0:23:51.11:0,51,850	0/0:7,0:15:15.05:0,15,244	1/1:3,13:17:42:492,42,0	1/1:5,8:13:24.06:292,24,0	1/1:1,11:12:36.11:437,36,0	1/1:2,22:25:49.48:607,49,0	0/0:3,0:8:18.06:0,18,289	0/0:20,0:20:42.11:0,42,704	0/0:19,0:21:48.09:0,48,776	0/0:8,0:14:17.93:0,18,156	1/1:7,17:24:57.09:680,57,0	1/1:4,18:22:47.73:583,48,0	0/0:6,0:6:15.04:0,15,242
chr10	97232523	.	AAAATGACTCCCTGGTGGCCAGTGGCTTGGG	A	705.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.837;DP=517;FS=5.206;HRun=0;HaplotypeScore=319.1958;InbreedingCoeff=0.9238;MQ=46.22;MQ0=54;MQRankSum=-3.246;QD=70.52;ReadPosRankSum=-0.281;VQSLOD=2.0255;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,4:10:12.04:791,12,0	0/0:9,0:8:24.08:0,24,2446	0/0:19,0:8:15.05:0,15,531	0/0:20,0:9:18.06:0,18,612	0/0:17,0:17:42.14:0,42,3846	0/0:16,0:15:33.11:0,33,2723	0/0:27,0:25:66.23:0,66,5752	0/0:23,0:16:39.12:0,39,2994	0/0:13,0:13:33.11:0,33,3448	0/0:26,0:24:66.23:0,66,5521	0/0:10,0:8:21.07:0,21,2029	0/0:20,0:19:42.14:0,42,4366	0/0:26,0:26:66.70:0,67,7094	0/0:21,0:20:54.19:0,54,5770	0/0:25,0:25:53.61:0,54,6264	0/0:16,0:14:36.12:0,36,4007	0/0:36,0:32:84.29:0,84,9428	0/0:21,0:20:48.16:0,48,5181	0/0:16,0:14:42.14:0,42,3743	0/0:17,0:16:42.14:0,42,3703	0/0:26,0:26:75.26:0,75,7941	0/0:12,0:11:21.07:0,21,2065	0/0:10,0:10:24.08:0,24,2005	0/0:25,0:23:60.19:0,60,6128	0/0:8,0:8:18.06:0,18,2123	0/0:24,0:22:60.21:0,60,5856	0/0:16,0:12:33.11:0,33,2264	0/0:8,0:8:24.08:0,24,2524
chr10	97234924	.	A	AT	5769.12	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-14.998;DP=668;FS=2.877;HRun=6;HaplotypeScore=61.5250;InbreedingCoeff=0.9958;MQ=84.81;MQ0=0;MQRankSum=-0.963;QD=31.70;ReadPosRankSum=0.977;VQSLOD=5.4245;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,47:48:99:1623,129,0	0/0:9,0:9:24.05:0,24,245	0/0:24,0:24:57.08:0,57,562	0/0:26,0:26:50.28:0,50,536	0/0:19,0:19:54.11:0,54,544	0/0:20,0:20:60.12:0,60,605	0/0:29,0:29:81.17:0,81,819	0/0:24,0:24:60.11:0,60,600	0/0:30,0:30:87.20:0,87,888	0/0:21,0:21:57.12:0,57,581	0/0:21,0:20:57.10:0,57,571	0/0:20,0:20:60.10:0,60,598	0/0:29,0:29:78.16:0,78,788	0/0:22,0:22:63.12:0,63,634	0/0:29,0:29:78.16:0,78,789	0/0:26,0:26:72.15:0,72,729	0/0:22,0:22:60.14:0,60,612	1/1:2,19:21:29.58:686,30,0	1/1:2,18:21:57.17:705,57,0	1/1:2,12:14:33.11:415,33,0	1/1:4,21:25:60.19:755,60,0	0/0:20,0:20:54.11:0,54,550	0/0:18,0:18:51.12:0,51,520	0/0:41,0:41:99:0,117,1185	0/0:19,0:19:57.13:0,57,582	1/1:4,24:28:13.99:792,14,0	1/1:4,21:25:63.20:793,63,0	0/0:17,0:17:45.08:0,45,451
chr10	97235473	.	AAATCTC	A	6172.18	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.321;DP=468;FS=9.223;HRun=0;HaplotypeScore=117.3917;InbreedingCoeff=0.9770;MQ=83.86;MQ0=0;MQRankSum=-13.201;QD=50.59;ReadPosRankSum=0.085;VQSLOD=4.6327;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:51.13:1107,51,0	0/0:3,0:3:9.03:0,9,322	0/0:22,0:20:60.07:0,60,1945	0/0:21,0:19:41.99:0,42,1571	0/0:15,0:15:42.14:0,42,1422	0/0:15,0:14:42.14:0,42,1464	0/0:19,0:19:57.20:0,57,1933	0/0:31,0:31:87.29:0,87,3005	0/0:20,0:20:57.19:0,57,2021	0/0:20,0:20:50.01:0,50,1784	0/0:20,0:20:57.18:0,57,1919	0/0:8,0:8:24.08:0,24,833	0/0:13,0:13:36.12:0,36,1251	0/0:15,0:15:45.15:0,45,1596	0/0:8,0:8:21.07:0,21,728	0/0:16,0:16:48.16:0,48,1713	0/0:16,0:16:42.14:0,42,1446	1/1:0,9:9:24.08:577,24,0	1/1:6,20:26:51.16:1172,51,0	1/1:3,21:24:60.21:1442,60,0	1/1:3,7:10:9.03:216,9,0	0/0:12,0:12:36.12:0,36,1286	0/0:34,0:34:96.33:0,96,3427	0/0:14,0:14:39.10:0,39,1222	0/0:14,0:14:42.14:0,42,1488	1/1:2,14:16:33.11:793,33,0	1/1:3,15:18:36.12:865,36,0	0/0:9,0:9:27.09:0,27,928
chr10	97235497	.	TTTTTTTTTTTTTTTG	T	2744.27	PASS	AB=0.900;AC=11;AF=0.196;AN=56;BaseQRankSum=9.173;DP=535;FS=4.210;HRun=0;HaplotypeScore=217.4602;InbreedingCoeff=0.8390;MQ=60.87;MQ0=14;MQRankSum=-7.423;QD=28.89;ReadPosRankSum=5.614;VQSLOD=2.4777;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,1:18:9.26:518,9,0	0/0:4,0:4:6.02:0,6,317	0/0:47,0:15:17.07:0,17,396	0/0:38,0:12:15.92:0,16,309	0/0:22,0:20:48.06:0,48,1980	0/0:29,0:28:69.24:0,69,3479	0/0:24,0:23:45.15:0,45,2287	0/0:33,0:33:54.61:0,55,2191	0/0:17,0:17:41.92:0,42,1940	0/0:24,0:24:55:0,55,2843	0/0:26,0:26:60.15:0,60,2847	0/0:12,0:11:24.08:0,24,1261	0/0:10,0:10:15.94:0,16,815	0/0:14,0:14:30.09:0,30,1483	0/0:9,0:9:27.09:0,27,1434	0/0:17,0:16:39.11:0,39,2078	0/0:22,0:22:60.11:0,60,2782	1/1:6,1:7:11.95:276,12,0	0/1:16,2:16:2.49:454,0,2	1/1:18,6:24:34.19:887,34,0	0/0:5,0:5:0:0,0,0	0/0:12,0:12:27.56:0,28,1267	0/0:29,0:28:57.17:0,57,2734	0/0:11,0:11:16.87:0,17,913	0/0:24,0:24:63.22:0,63,3238	1/1:13,4:16:13.39:561,13,0	1/1:10,0:10:12.04:215,12,0	0/0:11,0:11:24.08:0,24,1126
chr10	97235498	.	TTTTTTTTTTTTTTG	T	2377.90	PASS	AB=0.974;AC=12;AF=0.214;AN=56;BaseQRankSum=8.865;DP=530;FS=4.254;HRun=0;HaplotypeScore=205.3098;InbreedingCoeff=0.8154;MQ=58.87;MQ0=15;MQRankSum=-8.148;QD=24.51;ReadPosRankSum=5.354;VQSLOD=2.4915;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,2:16:18.40:521,18,0	0/0:4,0:4:6:0,6,290	0/0:50,0:15:19.49:0,19,354	0/0:37,0:11:18.65:0,19,314	0/0:23,0:21:49.83:0,50,1913	0/0:29,0:28:69.12:0,69,3214	0/0:23,0:22:44.99:0,45,2094	0/0:33,0:33:53.72:0,54,2023	0/0:17,0:17:38.52:0,39,1775	0/0:25,0:25:56.41:0,56,2760	0/0:25,0:25:60.08:0,60,2653	0/0:11,0:10:24.07:0,24,1184	0/0:10,0:10:15.89:0,16,759	0/0:14,0:14:30.04:0,30,1365	0/0:9,0:9:27.09:0,27,1326	0/0:17,0:16:39.08:0,39,1946	0/0:22,0:22:59.94:0,60,2560	1/1:7,0:7:9.01:221,9,0	0/1:17,1:16:10.43:384,0,10	1/1:21,2:23:35.05:770,35,0	0/1:5,0:5:0:0,0,0	0/0:12,0:12:25.58:0,26,1167	0/0:26,0:25:57.04:0,57,2576	0/0:11,0:11:16.80:0,17,856	0/0:24,0:24:63.19:0,63,2985	1/1:17,0:16:15.08:492,15,0	1/1:10,0:10:11.92:159,12,0	0/0:11,0:11:24.08:0,24,1046
chr10	97235740	.	TC	T	1602.11	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.567;DP=580;FS=18.107;HRun=1;HaplotypeScore=80.3051;InbreedingCoeff=0.9877;MQ=61.53;MQ0=0;MQRankSum=-10.437;QD=11.20;ReadPosRankSum=-2.872;VQSLOD=0.0468;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:32:64.59:428,65,0	0/0:11,0:11:33.10:0,33,482	0/0:22,0:15:28.25:0,28,586	0/0:20,0:20:54.16:0,54,768	0/0:26,0:26:78.26:0,78,1191	0/0:25,0:25:75.25:0,75,1147	0/0:21,0:21:63.18:0,63,916	0/0:30,0:30:90.24:0,90,1286	0/0:21,0:21:63.20:0,63,935	0/0:19,0:19:57.19:0,57,852	0/0:19,0:19:57.15:0,57,806	0/0:13,0:13:39.10:0,39,569	0/0:21,0:21:63.15:0,63,869	0/0:15,0:15:45.14:0,45,663	0/0:18,0:18:54.17:0,54,805	0/0:29,0:29:84.28:0,84,1281	0/0:23,0:23:69.18:0,69,1021	1/1:11,0:11:26.21:167,26,0	1/1:5,6:8:15.36:113,15,0	1/1:21,8:26:63.61:471,64,0	1/1:5,4:9:17.93:145,18,0	0/0:11,0:11:33.08:0,33,461	0/0:19,0:19:57.15:0,57,825	0/0:23,0:23:69.20:0,69,1013	0/0:23,0:23:69.20:0,69,1007	1/1:11,7:17:33.25:267,33,0	1/1:4,28:31:10.67:206,11,0	0/0:28,0:28:84.13:0,84,1138
chr10	97235744	.	TC	T	1716.66	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.012;DP=588;FS=5.229;HRun=1;HaplotypeScore=84.5093;InbreedingCoeff=0.9797;MQ=62.70;MQ0=0;MQRankSum=-10.629;QD=11.22;ReadPosRankSum=-4.969;VQSLOD=-0.1485;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,20:34:57.50:337,58,0	0/0:11,0:11:33.10:0,33,480	0/0:22,0:15:6.39:0,6,495	0/0:22,0:22:51.42:0,51,752	0/0:26,0:26:78.25:0,78,1171	0/0:25,0:25:75.25:0,75,1146	0/0:20,0:20:60.20:0,60,901	0/0:27,0:26:78.24:0,78,1135	0/0:22,0:22:66.20:0,66,959	0/0:18,0:18:54.18:0,54,827	0/0:19,0:19:54.15:0,54,780	0/0:14,0:14:42.10:0,42,590	0/0:18,0:18:54.10:0,54,767	0/0:16,0:16:48.15:0,48,703	0/0:20,0:20:60.19:0,60,889	0/0:29,0:29:87.25:0,87,1269	0/0:22,0:22:66.17:0,66,944	1/1:6,7:13:32.42:211,32,0	1/1:6,5:7:16.21:130,16,0	1/1:25,3:25:57.70:423,58,0	1/1:10,3:13:26.89:218,27,0	0/0:10,0:10:30.09:0,30,434	0/0:18,0:18:54.18:0,54,816	0/0:27,0:27:75.22:0,75,1097	0/0:24,0:24:72.20:0,72,1044	1/1:19,2:20:45.12:351,45,0	1/1:29,3:31:31.35:245,31,0	0/0:25,0:25:75.24:0,75,1101
chr10	97235747	.	TTC	T	1704.33	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.830;DP=592;FS=4.759;HRun=0;HaplotypeScore=94.3998;InbreedingCoeff=0.9941;MQ=61.73;MQ0=0;MQRankSum=-10.299;QD=10.86;ReadPosRankSum=-5.550;VQSLOD=2.0509;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,18:39:72.67:475,73,0	0/0:10,0:10:30.06:0,30,412	0/0:21,0:14:29.69:0,30,407	0/0:20,0:21:50.04:0,50,725	0/0:25,0:25:75.14:0,75,1050	0/0:27,0:27:81:0,81,1231	0/0:20,0:20:57.19:0,57,929	0/0:27,0:26:75.17:0,75,1057	0/0:21,0:21:63.16:0,63,932	0/0:19,0:19:57.08:0,57,835	0/0:18,0:18:54.15:0,54,807	0/0:13,0:13:38.89:0,39,533	0/0:18,0:18:47.91:0,48,682	0/0:16,0:16:47.93:0,48,694	0/0:20,0:20:60.17:0,60,909	0/0:30,0:30:90.25:0,90,1405	0/0:21,0:21:60.15:0,60,961	1/1:10,2:12:32.92:285,33,0	1/1:12,0:8:15.98:174,16,0	1/1:29,0:26:22.60:341,23,0	1/1:13,0:13:22.10:182,22,0	0/0:11,0:11:33.06:0,33,442	0/0:19,0:19:54.13:0,54,795	0/0:28,0:28:84.25:0,84,1250	0/0:26,0:26:78.18:0,78,1116	1/1:20,0:19:24.23:244,24,0	1/1:31,0:30:17.35:201,17,0	0/0:24,0:24:72.19:0,72,1059
chr10	97235748	.	TC	T	1964.50	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.152;DP=590;FS=1.327;HRun=1;HaplotypeScore=82.2420;InbreedingCoeff=0.9978;MQ=61.42;MQ0=0;MQRankSum=-10.452;QD=12.59;ReadPosRankSum=-6.504;VQSLOD=-0.2507;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:40,1:40:81.52:574,82,0	0/0:10,0:10:30.06:0,30,347	0/0:20,0:13:28.48:0,28,315	0/0:20,0:20:36.97:0,37,564	0/0:26,0:26:78.11:0,78,880	0/0:27,0:27:76.60:0,77,968	0/0:20,0:20:59.22:0,59,749	0/0:26,0:25:75.16:0,75,881	0/0:21,0:21:63.16:0,63,770	0/0:20,0:20:60.08:0,60,707	0/0:19,0:19:57.14:0,57,690	0/0:13,0:13:38.89:0,39,446	0/0:16,0:16:43.53:0,44,550	0/0:16,0:16:42.90:0,43,558	0/0:21,0:21:63.16:0,63,771	0/0:30,0:30:90.23:0,90,1125	0/0:21,0:21:57.87:0,58,757	1/1:8,5:13:32.64:226,33,0	1/1:12,0:8:17.78:134,18,0	1/1:27,0:24:58.94:425,59,0	1/1:12,0:12:27.36:219,27,0	0/0:11,0:11:33.06:0,33,379	0/0:18,0:18:54.13:0,54,652	0/0:28,0:28:84.16:0,84,1011	0/0:27,0:27:81.15:0,81,956	1/1:20,0:19:42.93:332,43,0	1/1:31,0:30:34.03:254,34,0	0/0:24,0:24:72.13:0,72,863
chr10	97237962	.	GCGCGTGCGCGCT	G	779.60	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=5.465;DP=502;FS=7.550;HRun=0;HaplotypeScore=171.1204;InbreedingCoeff=0.2795;MQ=61.14;MQ0=1;MQRankSum=-5.208;QD=8.12;ReadPosRankSum=-0.288;VQSLOD=2.1467;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:6.98:0,7,139	0/0:11,0:11:27.09:0,27,1289	0/0:6,0:3:3.26:0,3,10	0/0:7,0:7:0.19:0,0,12	0/0:9,0:9:24.07:0,24,1183	0/0:22,0:22:60.17:0,60,2877	0/0:27,0:27:66.21:0,66,2713	0/0:18,0:18:33.48:0,33,579	0/0:8,0:8:18.05:0,18,529	0/0:23,0:23:63.22:0,63,2793	0/0:15,0:15:27.09:0,27,1291	0/0:25,0:24:63.22:0,63,3014	0/0:16,0:16:42.08:0,42,1441	0/0:10,0:10:27.09:0,27,1284	0/0:12,0:12:24.07:0,24,877	0/0:6,0:6:15.05:0,15,675	0/0:29,0:29:84.27:0,84,4018	1/1:9,11:19:15.44:441,15,0	0/1:10,0:10:52.11:110,0,52	0/1:11,0:11:15.93:16,0,99	1/1:25,0:24:3.20:13,3,0	0/0:15,0:15:29.75:0,30,1394	0/0:24,0:23:50.91:0,51,2236	0/0:47,0:47:99:0,123,5797	0/0:26,0:26:72.25:0,72,3624	0/1:19,0:19:99:242,0,413	0/1:11,0:11:44.82:92,0,45	0/0:15,0:15:42.12:0,42,1612
chr10	97237970	.	GCGCT	G	1479.22	PASS	AB=0.531;AC=12;AF=0.214;AN=56;BaseQRankSum=9.321;DP=503;FS=20.825;HRun=0;HaplotypeScore=102.6093;InbreedingCoeff=0.7692;MQ=67.98;MQ0=1;MQRankSum=-7.273;QD=11.38;ReadPosRankSum=1.068;VQSLOD=1.3704;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,33:37:12:179,12,0	0/0:12,0:12:33.11:0,33,812	0/0:7,0:4:3.44:0,3,55	0/0:11,0:12:7.48:0,7,80	0/0:10,0:10:27.09:0,27,651	0/0:21,0:21:57.18:0,57,1398	0/0:27,0:27:72.23:0,72,1663	0/0:16,0:16:23.04:0,23,337	0/0:7,0:7:15.05:0,15,354	0/0:24,0:24:57.19:0,57,1340	0/0:12,0:12:30.09:0,30,657	0/0:25,0:25:69.22:0,69,1697	0/0:22,0:22:51.17:0,51,1184	0/0:11,0:11:33.10:0,33,774	0/0:10,0:10:27.08:0,27,589	0/0:7,0:7:21.06:0,21,396	0/0:29,0:29:78.11:0,78,1843	1/1:16,0:15:15.02:144,15,0	1/1:5,5:10:15.65:245,16,0	1/1:1,12:13:6.02:113,6,0	0/1:3,20:22:0:0,0,0	0/0:14,0:14:33.03:0,33,788	0/0:19,0:18:51.12:0,51,1087	0/0:45,0:45:99:0,132,3266	0/0:26,0:26:75.26:0,75,1940	0/1:2,18:20:84.05:685,0,84	1/1:1,10:11:15.05:280,15,0	0/0:17,0:17:39.03:0,39,819
chr10	97240278	.	C	CTG	3800.86	PASS	AB=0.750;AC=12;AF=0.214;AN=56;BaseQRankSum=-7.131;DP=879;FS=0.886;HRun=0;HaplotypeScore=145.9577;InbreedingCoeff=0.1654;MQ=69.91;MQ0=10;MQRankSum=0.823;QD=11.45;ReadPosRankSum=-0.419;VQSLOD=3.3008;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:32,11:40:17.27:533,0,17	0/0:13,0:13:18.03:0,18,193	0/0:49,0:32:3:0,3,30	0/0:51,0:32:2.84:0,3,14	0/0:24,0:25:42.40:0,42,436	0/1:28,0:29:2.07:2,0,343	0/0:30,1:33:1.76:0,2,413	0/0:35,0:36:21.31:0,21,244	0/0:33,0:32:53.66:0,54,574	0/1:32,0:32:3.58:4,0,439	0/0:15,0:16:20.89:0,21,216	0/1:14,21:34:3.57:705,0,4	0/1:16,14:31:55.85:379,0,56	1/1:19,16:35:21.47:488,21,0	0/0:40,0:42:68.05:0,68,722	0/0:34,0:38:19.83:0,20,551	0/0:29,0:30:56.76:0,57,574	1/1:26,12:37:17.96:819,18,0	0/0:13,0:20:19.62:0,20,98	0/0:16,0:20:15.51:0,16,75	0/0:33,0:45:33.84:0,34,166	0/1:15,16:31:73.45:247,0,73	0/1:9,13:25:23.76:250,0,24	0/1:13,18:33:64.81:375,0,65	0/0:31,0:31:34.72:0,35,570	0/0:24,0:31:8.93:0,9,68	0/0:12,0:21:33.60:0,34,160	0/0:7,0:6:12.03:0,12,135
chr10	97240359	.	GTA	G	5075.50	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.410;DP=805;FS=4.699;HRun=0;HaplotypeScore=128.5427;InbreedingCoeff=0.9991;MQ=63.17;MQ0=3;MQRankSum=-2.531;QD=30.21;ReadPosRankSum=1.590;VQSLOD=6.4912;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:40:84.27:0,84,1374	0/0:11,0:11:30.10:0,30,501	0/0:30,0:24:49.40:0,49,838	0/0:30,0:25:22.98:0,23,548	0/0:32,0:32:87.30:0,87,1476	0/0:30,0:30:78.25:0,78,1292	0/0:22,0:22:51.16:0,51,841	0/0:42,0:42:93.32:0,93,1568	0/0:27,0:26:75.08:0,75,1270	0/0:48,0:48:99:0,117,1928	0/0:15,0:15:42.14:0,42,704	0/0:22,0:22:54.18:0,54,910	0/0:30,0:30:81.26:0,81,1349	0/0:33,0:33:84.25:0,84,1382	0/0:36,0:36:90.29:0,90,1484	0/0:38,0:38:99:0,105,1707	0/0:25,0:25:63.20:0,63,1038	1/1:4,22:26:62.01:781,62,0	1/1:2,14:16:41.14:480,41,0	1/1:2,17:19:45.15:585,45,0	1/1:3,46:49:99:1331,104,0	0/0:40,0:40:99:0,102,1716	0/0:19,0:19:51.13:0,51,803	0/0:21,0:21:39.12:0,39,654	0/0:30,1:31:48.28:0,48,1361	1/1:3,34:37:57.25:1275,57,0	1/1:2,19:21:48.16:623,48,0	0/0:13,0:13:27.09:0,27,459
chr10	97240493	.	A	ATG	7113.31	PASS	AB=0.768;AC=12;AF=0.214;AN=56;BaseQRankSum=-4.880;DP=885;FS=0.655;HRun=0;HaplotypeScore=128.8595;InbreedingCoeff=0.8530;MQ=61.28;MQ0=2;MQRankSum=-3.398;QD=34.20;ReadPosRankSum=1.058;VQSLOD=6.9553;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:78.30:0,78,1003	0/0:9,0:9:24.07:0,24,313	0/0:33,0:31:22.02:0,22,477	0/1:14,0:9:0.43:0,0,164	0/0:21,0:21:60.13:0,60,756	0/0:33,0:33:84.19:0,84,1067	0/0:22,0:22:60.06:0,60,718	0/0:43,0:43:99:0,102,1233	0/0:28,0:28:66.12:0,66,802	0/0:45,0:45:99:0,129,1656	0/0:30,0:30:78.20:0,78,1018	0/0:37,0:37:99:0,99,1262	0/0:31,0:31:84.26:0,84,1128	0/0:39,0:39:99:0,105,1384	0/0:53,0:53:99:0,135,1712	0/0:42,0:42:99:0,111,1406	0/0:36,0:36:93.21:0,93,1213	1/1:19,0:19:24.51:366,25,0	1/1:4,19:22:54.10:853,54,0	1/1:13,18:31:75.15:1122,75,0	1/1:11,37:47:99:1987,123,0	0/0:29,0:29:84.17:0,84,1035	0/0:25,0:25:63.11:0,63,776	0/0:24,0:24:54.06:0,54,667	0/0:30,0:30:78.22:0,78,1035	0/1:6,38:44:6.66:1800,0,7	1/1:12,17:29:33.79:985,34,0	0/0:30,0:30:87.28:0,87,1178
chr10	97240497	.	G	GTA	3899.60	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=12.192;DP=876;FS=3.017;HRun=0;HaplotypeScore=141.8383;InbreedingCoeff=0.5703;MQ=62.28;MQ0=2;MQRankSum=-0.822;QD=20.10;ReadPosRankSum=2.389;VQSLOD=3.9750;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:63.67:0,64,787	0/0:10,0:10:21.07:0,21,262	0/0:32,0:30:15.73:0,16,314	0/0:17,0:11:3.40:0,3,129	0/0:22,0:22:54.10:0,54,642	0/0:34,0:34:81.19:0,81,957	0/0:23,0:23:48.14:0,48,587	0/0:39,0:39:81.21:0,81,973	0/0:27,0:27:51.14:0,51,613	0/0:46,0:46:99:0,120,1441	0/0:28,0:28:78.04:0,78,933	0/0:36,0:36:87.24:0,87,1068	0/0:30,0:30:84.23:0,84,1021	0/0:36,0:36:96.24:0,96,1189	0/0:47,0:48:99:0,120,1402	0/0:44,0:44:99:0,99,1168	0/0:34,0:34:87.20:0,87,1040	1/1:3,14:17:45.10:708,45,0	0/1:24,0:23:32.61:341,0,33	1/1:31,0:31:54.07:540,54,0	1/1:48,0:47:99:1045,105,0	0/0:30,0:30:72.19:0,72,871	0/0:25,0:26:50.97:0,51,614	0/0:23,0:23:45.12:0,45,562	0/0:28,0:28:75.14:0,75,891	0/1:45,0:45:96.28:804,0,96	0/1:29,0:29:33.71:460,0,34	0/0:31,0:31:87.17:0,87,1065
chr10	97240556	.	AGTGTGT	A	5619.20	PASS	AB=0.648;AC=11;AF=0.196;AN=56;BaseQRankSum=13.601;DP=859;FS=0.396;HRun=0;HaplotypeScore=197.2554;InbreedingCoeff=0.6437;MQ=56.10;MQ0=8;MQRankSum=-13.186;QD=30.54;ReadPosRankSum=0.299;VQSLOD=4.3326;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,24:33:12.51:499,0,13	0/0:9,0:10:17.22:0,17,575	0/0:41,0:22:42.14:0,42,1161	0/0:32,0:23:29.15:0,29,628	0/0:24,0:24:66.21:0,66,2038	0/0:34,0:35:87.30:0,87,2721	0/0:27,0:28:66.19:0,66,1971	0/0:31,0:31:63.22:0,63,2070	0/0:33,0:34:96.32:0,96,3062	0/0:38,0:38:96.32:0,96,2883	0/0:26,0:26:60.15:0,60,1672	0/0:35,0:36:80.09:0,80,2563	0/0:33,0:33:87.30:0,87,2821	0/0:31,0:31:73.62:0,74,2471	0/0:43,0:43:99:0,117,3748	0/0:46,0:49:99:0,119,3891	0/0:23,0:24:59.19:0,59,1674	0/1:7,6:13:79.85:324,0,80	0/1:9,8:16:99:616,0,101	1/1:9,24:32:57.14:1135,57,0	1/1:14,9:24:8.72:195,9,0	0/0:42,0:43:99:0,102,3229	0/0:29,0:29:75.26:0,75,2460	0/0:34,0:34:74.91:0,75,2418	0/0:30,0:32:90.29:0,90,2792	1/1:9,20:30:13.32:1510,13,0	1/1:6,28:34:66.12:1340,66,0	0/0:21,0:21:57.15:0,57,1650
chr10	97243330	.	CT	C	1033.79	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.365;DP=621;FS=5.740;HRun=2;HaplotypeScore=58.0724;InbreedingCoeff=0.9802;MQ=64.30;MQ0=2;MQRankSum=-4.894;QD=33.35;ReadPosRankSum=1.927;VQSLOD=3.6514;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.19:0,78,1120	0/0:8,0:8:24.08:0,24,355	0/0:23,0:22:29:0,29,631	0/0:17,0:12:33:0,33,411	0/0:34,0:34:99:0,102,1504	0/0:28,0:28:81.24:0,81,1158	0/0:14,0:13:39.11:0,39,562	0/0:36,0:35:99:0,102,1486	0/0:24,0:22:66.19:0,66,942	0/0:20,0:19:57.19:0,57,839	0/0:23,0:23:69.22:0,69,1015	0/0:19,0:19:54.17:0,54,791	0/0:29,0:29:87.29:0,87,1297	0/0:16,0:16:48.16:0,48,719	0/0:30,0:30:87.29:0,87,1285	0/0:20,0:20:57.19:0,57,854	0/0:24,0:23:60.19:0,60,879	1/1:1,30:31:87.28:1129,87,0	0/0:12,0:12:33.11:0,33,495	0/0:36,0:36:99:0,108,1557	0/0:9,0:9:27.06:0,27,363	0/0:24,0:24:72.23:0,72,1038	0/0:14,0:14:36.12:0,36,539	0/0:29,0:29:87.25:0,87,1254	0/0:13,0:13:39.13:0,39,585	0/0:28,0:28:81.27:0,81,1197	0/0:29,0:29:87.27:0,87,1280	0/0:5,0:5:15.05:0,15,225
chr10	97243727	.	ATATG	A	1504.62	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.915;DP=657;FS=0.000;HRun=0;HaplotypeScore=105.8726;InbreedingCoeff=0.9943;MQ=59.45;MQ0=1;MQRankSum=-0.734;QD=27.36;ReadPosRankSum=3.070;VQSLOD=3.3754;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,29:32:48.16:838,48,0	0/0:12,0:12:36.12:0,36,914	0/0:21,0:16:20.16:0,20,271	0/0:25,0:18:24.42:0,24,381	0/0:29,0:29:66.23:0,66,1595	0/0:31,0:31:87.28:0,87,2149	0/0:17,0:17:48.16:0,48,1184	0/0:24,0:24:63.21:0,63,1480	0/0:16,0:16:45.13:0,45,1085	0/0:30,0:30:75.26:0,75,1866	0/0:22,0:22:63.22:0,63,1561	0/0:24,0:24:72.23:0,72,1759	0/0:21,0:21:60.21:0,60,1518	0/0:20,0:20:45.14:0,45,1030	0/0:23,0:23:54.19:0,54,1361	0/0:26,0:26:69.24:0,69,1709	0/0:22,0:22:54.19:0,54,1363	1/1:2,21:23:45.15:788,45,0	0/0:23,0:21:45.15:0,45,1077	0/0:38,0:38:99:0,99,2477	0/0:20,0:20:51.18:0,51,1284	0/0:26,0:26:72.25:0,72,1807	0/0:25,0:25:69.24:0,69,1737	0/0:22,0:22:60.21:0,60,1525	0/0:20,0:20:51.15:0,51,1241	0/0:28,0:28:81.28:0,81,2056	0/0:29,0:29:75.26:0,75,1841	0/0:8,0:8:21.07:0,21,483
chr10	97243823	.	AGT	A	200.48	PASS	AB=0.931;AC=18;AF=0.333;AN=54;BaseQRankSum=5.323;DP=551;FS=9.774;HRun=0;HaplotypeScore=69.9430;InbreedingCoeff=0.0846;MQ=66.36;MQ0=11;MQRankSum=-0.418;QD=0.73;ReadPosRankSum=2.771;VQSLOD=0.1701;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:45.09:0,45,558	0/0:4,0:4:3.01:0,3,41	./.	0/1:47,0:27:0:0,0,0	0/0:12,0:12:6.02:0,6,90	0/0:16,0:16:15:0,15,158	0/1:20,0:21:2:2,0,140	0/0:25,0:24:14.91:0,15,127	0/1:21,0:21:11.78:12,0,225	0/0:12,0:12:7.26:0,7,76	0/0:8,0:8:5.65:0,6,69	0/1:20,2:22:14.33:14,0,186	0/1:19,2:21:8.79:9,0,247	0/0:18,0:18:12.04:0,12,172	0/1:18,4:22:47.66:48,0,139	0/1:13,1:16:41.54:42,0,140	0/0:23,0:24:21.01:0,21,245	1/1:17,0:22:17.04:84,17,0	1/1:18,0:17:1.07:11,1,0	1/1:8,4:11:3.01:33,3,0	0/0:23,0:32:12.02:0,12,139	0/1:10,0:10:14.56:15,0,158	0/1:12,1:13:20.80:21,0,118	0/0:25,0:25:21.03:0,21,285	0/0:15,0:15:24.07:0,24,339	0/0:13,0:13:18:0,18,202	1/1:12,1:14:5.44:46,5,0	0/1:10,2:12:17.79:18,0,157
chr10	97245834	.	CA	C	1667	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.586;DP=724;FS=0.000;HRun=1;HaplotypeScore=68.0224;InbreedingCoeff=0.9887;MQ=75.87;MQ0=0;MQRankSum=-2.099;QD=36.24;ReadPosRankSum=2.236;VQSLOD=4.0028;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,46:46:99:1762,126,0	0/0:7,0:7:18.51:0,19,262	0/0:13,1:14:24.31:0,24,491	0/0:16,0:17:46.01:0,46,686	0/0:22,0:22:66.21:0,66,1032	0/0:26,0:26:78.23:0,78,1196	0/0:22,0:22:66.21:0,66,1031	0/0:29,0:29:87.30:0,87,1389	0/0:20,0:20:60.19:0,60,936	0/0:15,0:15:45.15:0,45,719	0/0:11,0:11:33.11:0,33,528	0/0:38,0:38:99:0,114,1799	0/0:26,0:26:78.27:0,78,1244	0/0:35,0:35:99:0,102,1628	0/0:40,0:40:99:0,120,1821	0/0:27,0:27:81.26:0,81,1271	0/0:38,0:38:99:0,114,1804	0/0:20,0:20:57.18:0,57,887	0/0:22,0:22:63.17:0,63,957	0/0:29,0:29:84.26:0,84,1295	0/0:42,0:42:99:0,126,1963	0/0:20,0:20:60.20:0,60,959	0/0:19,0:19:57.19:0,57,911	0/0:45,0:45:99:0,135,2104	0/0:28,0:28:84.26:0,84,1294	0/0:39,0:39:99:0,117,1828	0/0:19,0:19:57.19:0,57,905	0/0:8,0:8:24.08:0,24,383
chr10	97245988	.	C	CT	1313.71	PASS	AB=0.899;AC=12;AF=0.214;AN=56;BaseQRankSum=-3.805;DP=590;FS=2.798;HRun=12;HaplotypeScore=74.2801;InbreedingCoeff=0.5618;MQ=64.36;MQ0=2;MQRankSum=-0.370;QD=8.11;ReadPosRankSum=-1.926;VQSLOD=2.4373;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:45:48.34:0,48,179	0/0:17,0:17:44.74:0,45,328	0/0:21,0:17:11.47:0,11,128	0/1:16,0:10:3.98:4,0,49	0/0:32,2:35:15.83:0,16,411	0/0:14,1:16:14.63:0,15,261	0/0:18,2:21:18.34:0,18,227	0/0:30,0:31:23.30:0,23,311	0/0:17,2:19:12.55:0,13,255	0/0:26,2:28:24.28:0,24,333	0/1:14,1:15:5.36:5,0,129	0/0:18,1:19:12.39:0,12,244	0/0:16,0:16:32.79:0,33,240	0/0:18,0:18:38.67:0,39,284	0/1:20,1:22:3.24:3,0,241	0/0:10,0:10:26.83:0,27,197	0/0:29,1:32:30.64:0,31,354	0/0:10,0:22:4.31:0,4,59	0/1:16,12:28:13.53:306,0,14	1/1:9,6:17:10.69:212,11,0	1/1:2,14:16:24.04:234,24,0	0/0:15,0:15:38.75:0,39,282	0/0:11,0:11:17.83:0,18,131	0/0:22,0:22:47.63:0,48,350	0/0:19,1:21:17.52:0,18,279	1/1:13,23:36:6.05:504,6,0	1/1:1,11:12:21.03:204,21,0	0/0:7,0:6:14.89:0,15,109
chr10	97246422	.	G	GA	5661.05	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-11.811;DP=607;FS=4.252;HRun=5;HaplotypeScore=55.5113;InbreedingCoeff=0.9990;MQ=82.60;MQ0=0;MQRankSum=-1.904;QD=36.29;ReadPosRankSum=0.800;VQSLOD=4.7084;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:34:81.27:1134,81,0	0/0:9,0:9:27.08:0,27,323	0/0:16,0:16:32.90:0,33,427	0/0:22,0:23:45.24:0,45,581	0/0:41,0:41:99:0,120,1437	0/0:23,0:23:66.20:0,66,791	0/0:24,0:24:66.15:0,66,755	0/0:25,0:25:72.20:0,72,844	0/0:16,0:16:45.14:0,45,540	0/0:32,0:32:84.24:0,84,997	0/0:32,0:32:93.29:0,93,1115	0/0:18,0:18:54.16:0,54,639	0/0:18,0:18:51.15:0,51,601	0/0:19,0:19:57.17:0,57,683	0/0:23,0:23:63.19:0,63,755	0/0:13,0:13:39.12:0,39,467	0/0:23,0:23:69.21:0,69,827	1/1:0,17:18:51.17:710,51,0	1/1:1,25:26:75.24:1033,75,0	1/1:1,19:20:51.12:687,51,0	1/1:0,12:12:36.12:504,36,0	0/0:29,0:29:81.25:0,81,972	0/0:21,0:21:60.18:0,60,719	0/0:18,0:18:51.12:0,51,587	0/0:19,0:19:51.16:0,51,612	1/1:2,20:22:60.20:838,60,0	1/1:1,23:24:54.18:755,54,0	0/0:9,0:9:21.06:0,21,252
chr10	97247052	.	A	ATGTTTGGTGTTTGG	6723.49	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-0.647;DP=765;FS=7.409;HRun=0;HaplotypeScore=292.2606;InbreedingCoeff=0.9750;MQ=63.72;MQ0=0;MQRankSum=-8.883;QD=47.68;ReadPosRankSum=-4.509;VQSLOD=2.8834;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:69.21:0,69,2277	0/0:7,0:7:12.04:0,12,427	0/0:34,0:31:11.88:0,12,443	0/0:43,0:43:38.65:0,39,884	0/0:32,0:32:60.21:0,60,2143	0/0:26,0:26:60.16:0,60,1905	0/0:36,0:36:63.17:0,63,1895	0/0:39,0:39:27.09:0,27,691	0/0:28,0:28:63.22:0,63,2265	0/0:22,0:22:33.09:0,33,1196	0/0:20,0:20:24.06:0,24,735	0/0:28,0:28:45.13:0,45,1461	0/0:22,0:22:48.15:0,48,1633	0/0:21,0:21:39.13:0,39,1291	0/0:28,0:28:63.22:0,63,2252	0/0:27,0:27:57.20:0,57,2120	0/0:37,0:37:72.23:0,72,2421	0/0:28,0:28:54.18:0,54,1907	1/1:22,2:23:11.58:428,12,0	1/1:18,6:25:36.08:1551,36,0	1/1:39,0:39:45.14:1557,45,0	0/0:15,0:15:36.11:0,36,1229	0/0:23,0:23:51.18:0,51,1860	0/0:25,0:25:45.15:0,45,1604	0/0:27,0:27:54.19:0,54,1796	1/1:18,9:28:39.13:2174,39,0	1/1:18,5:24:18.97:1012,19,0	0/0:13,0:13:27.09:0,27,961
chr10	97248143	.	TGGG	T	94.85	PASS	AB=1.000;AC=7;AF=0.135;AN=52;BaseQRankSum=4.483;DP=590;FS=5.458;HRun=5;HaplotypeScore=100.2038;InbreedingCoeff=0.8196;MQ=85.93;MQ0=1;MQRankSum=-3.123;QD=10.54;ReadPosRankSum=-1.211;VQSLOD=-0.6335;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:88.68:0,89,2730	0/0:10,0:10:30.10:0,30,654	0/0:50,0:41:99:0,109,1948	0/0:46,0:39:96.49:0,96,1820	0/0:29,0:29:87.30:0,87,1949	0/0:26,0:26:75.26:0,75,1671	0/0:20,0:20:60.21:0,60,1364	0/0:40,0:40:99:0,120,2612	0/0:17,0:17:51.18:0,51,1157	0/0:27,0:27:78.27:0,78,1774	0/0:28,0:28:78.27:0,78,1764	0/0:23,0:23:69.22:0,69,1507	0/0:29,0:29:87.30:0,87,1938	0/0:16,0:16:48.16:0,48,1094	0/0:25,0:25:72.25:0,72,1618	0/0:22,0:22:60.18:0,60,1282	0/0:30,0:30:87.30:0,87,1909	0/1:2,0:2:0:0,0,0	1/1:0,1:3:6.48:76,6,0	1/1:1,1:2:4.25:32,4,0	./.	0/0:21,0:21:60.21:0,60,1361	0/0:31,0:31:90.30:0,90,1983	0/0:20,0:20:60.21:0,60,1358	0/0:21,0:21:63.22:0,63,1414	./.	1/1:0,2:2:6.02:100,6,0	0/0:6,0:6:18.06:0,18,398
chr10	97250516	.	G	GA	2008.57	PASS	AB=0.872;AC=20;AF=0.357;AN=56;BaseQRankSum=-2.274;DP=503;FS=3.131;HRun=12;HaplotypeScore=59.4225;InbreedingCoeff=0.3476;MQ=74.38;MQ0=2;MQRankSum=-1.156;QD=7.38;ReadPosRankSum=-2.201;VQSLOD=1.7971;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:28:51.40:271,51,0	0/0:6,0:8:18.96:0,19,121	0/1:24,1:21:20.15:20,0,86	0/1:15,0:12:12.91:38,0,13	0/0:21,0:22:58.69:0,59,421	0/1:19,2:23:10.28:10,0,247	0/1:12,2:15:0.36:0,0,152	0/0:23,2:25:15.48:0,15,276	0/0:16,1:17:8.88:0,9,232	0/1:21,2:24:8.64:9,0,262	0/0:16,0:17:43.78:0,44,312	0/0:12,2:14:3.63:0,4,190	0/0:9,0:9:20.87:0,21,153	0/0:11,0:11:23.83:0,24,175	0/0:18,0:19:25.53:0,26,308	0/0:16,1:19:5.61:0,6,195	0/0:20,0:20:47.66:0,48,349	1/1:2,15:17:39.06:379,39,0	0/1:8,10:18:7.85:234,0,8	1/1:9,15:24:10.92:244,11,0	1/1:2,4:6:9.01:88,9,0	0/1:15,2:17:9.29:9,0,238	0/0:23,0:24:51.80:0,52,376	0/1:6,3:9:40.47:40,0,70	0/0:15,0:15:32.79:0,33,241	1/1:5,22:29:46.05:608,46,0	1/1:6,14:20:8.14:240,8,0	0/0:8,1:11:1.75:0,2,158
chr10	97251350	.	TAA	T	3959.84	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.234;DP=604;FS=5.833;HRun=12;HaplotypeScore=81.0854;InbreedingCoeff=0.9983;MQ=70.93;MQ0=3;MQRankSum=1.504;QD=22.50;ReadPosRankSum=4.272;VQSLOD=3.4806;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:38:93:928,93,0	0/0:7,0:9:22.92:0,23,285	0/0:13,0:13:22.33:0,22,265	0/0:23,0:21:26.85:0,27,443	0/0:17,0:19:38.53:0,39,486	0/0:22,0:22:59.65:0,60,787	0/0:27,0:31:80.74:0,81,1124	0/0:20,0:21:44.63:0,45,616	0/0:18,0:18:45.15:0,45,670	0/0:28,0:29:56.78:0,57,810	0/0:18,0:18:47.77:0,48,619	0/0:20,0:20:54.16:0,54,765	0/0:22,0:22:63.21:0,63,940	0/0:29,0:30:80.73:0,81,1112	0/0:18,0:18:49.37:0,49,694	0/0:22,0:23:62.68:0,63,867	0/0:25,0:28:78.25:0,78,1129	1/1:2,17:19:42.08:427,42,0	1/1:3,19:21:54.09:541,54,0	1/1:4,15:19:39.03:397,39,0	1/1:0,13:13:33.07:336,33,0	0/0:10,0:10:27.03:0,27,358	0/0:12,0:12:27.04:0,27,357	0/0:21,0:21:56.68:0,57,814	0/0:19,0:20:47.32:0,47,635	1/1:8,25:33:70.54:722,71,0	1/1:9,22:31:60.08:609,60,0	0/0:15,0:18:35.61:0,36,501
chr10	97251665	.	T	TC	416.58	PASS	AB=0.890;AC=23;AF=0.442;AN=52;BaseQRankSum=4.190;DP=189;FS=0.000;HRun=2;HaplotypeScore=67.4564;InbreedingCoeff=0.0540;MQ=47.63;MQ0=52;MQRankSum=-1.257;QD=4.34;ReadPosRankSum=-2.033;VQSLOD=-0.3523;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,2:12:19.99:20,0,233	1/1:2,0:3:4.61:19,5,0	0/0:13,0:1:3.01:0,3,38	0/0:27,0:10:4.94:0,5,53	0/0:2,1:2:0:0,0,0	0/0:7,1:5:3.60:0,4,74	0/1:5,0:4:29.80:34,0,30	0/0:8,0:1:3.01:0,3,39	0/0:2,0:2:3.01:0,3,37	1/1:4,2:3:8.88:81,9,0	./.	1/1:2,1:3:3:25,3,0	0/0:6,0:4:2.28:0,2,38	1/1:4,0:2:1.55:4,2,0	0/1:2,0:3:26.93:27,0,31	1/1:4,1:3:5.49:32,5,0	0/0:7,0:4:4.83:0,5,44	./.	0/0:8,0:1:3.01:0,3,39	0/1:9,2:9:59.12:59,0,65	0/1:14,0:11:4.28:4,0,189	0/1:3,2:4:24.37:33,0,24	1/1:2,2:3:6.02:68,6,0	0/0:4,0:4:2.99:0,3,36	1/1:4,0:3:1.07:47,1,0	0/1:9,3:11:90.33:90,0,166	1/1:3,0:2:2.94:18,3,0	0/0:5,0:5:9.03:0,9,117
chr10	97251670	.	T	TC	486.60	PASS	AB=0.906;AC=27;AF=0.519;AN=52;BaseQRankSum=4.997;DP=186;FS=0.000;HRun=2;HaplotypeScore=62.7067;InbreedingCoeff=-0.0228;MQ=54.39;MQ0=47;MQRankSum=-1.151;QD=4.38;ReadPosRankSum=-1.949;VQSLOD=-0.2708;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:12:36.02:36,0,180	1/1:1,1:2:5.42:24,5,0	0/0:16,0:3:6.01:0,6,62	0/0:33,0:12:7.24:0,7,79	0/1:1,1:2:0:0,0,0	0/1:8,1:6:2.14:2,0,42	0/1:3,2:4:29.51:45,0,30	0/0:5,0:1:3.01:0,3,39	0/0:1,0:1:3.01:0,3,39	1/1:4,0:2:6:63,6,0	./.	1/1:3,0:3:2.99:24,3,0	0/1:5,0:3:24.99:25,0,33	1/1:3,0:2:1.25:3,1,0	0/1:3,0:3:29.99:44,0,30	1/1:3,1:3:5.90:43,6,0	0/0:6,0:3:3.01:0,3,39	./.	0/0:7,0:1:3.01:0,3,39	0/1:9,1:8:52.81:84,0,53	0/1:13,1:11:13.49:13,0,159	0/1:4,1:4:12.69:34,0,13	1/1:3,0:3:6.02:68,6,0	0/1:3,0:3:0:0,0,0	1/1:3,0:2:0.41:21,0,0	0/1:9,1:11:74.22:74,0,162	1/1:3,0:2:2.99:23,3,0	0/0:5,0:5:9.03:0,9,117
chr10	97251680	.	T	TC	631.91	PASS	AB=0.928;AC=27;AF=0.563;AN=48;BaseQRankSum=4.948;DP=175;FS=0.000;HRun=2;HaplotypeScore=62.9482;InbreedingCoeff=0.0814;MQ=81.84;MQ0=44;MQRankSum=-2.186;QD=7.52;ReadPosRankSum=-0.696;VQSLOD=0.4643;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,2:11:76.39:76,0,102	1/1:1,0:1:3.01:30,3,0	0/0:28,0:10:14.33:0,14,206	0/0:39,0:17:2.04:0,2,158	./.	0/1:7,1:5:29.80:54,0,30	0/1:3,0:2:10.72:11,0,33	0/0:5,0:1:3.01:0,3,39	0/0:1,0:1:3.01:0,3,39	1/1:2,1:1:3.01:41,3,0	./.	1/1:2,1:2:3.01:41,3,0	1/1:3,0:2:3.01:37,3,0	./.	0/1:3,0:3:29.56:49,0,30	1/1:2,1:1:2.74:12,3,0	0/0:4,0:2:3.01:0,3,39	./.	0/0:6,0:1:3:0,3,26	1/1:7,1:6:10.77:83,11,0	0/1:10,1:10:21.26:21,0,68	1/1:4,0:3:6.02:73,6,0	1/1:1,1:2:6.02:70,6,0	0/1:3,0:3:0:0,0,0	1/1:2,1:2:2.29:27,2,0	0/1:8,2:9:86.97:115,0,87	1/1:2,0:2:3.01:32,3,0	0/0:4,0:4:9.03:0,9,116
chr10	97251685	.	T	TC	469.18	PASS	AB=0.876;AC=25;AF=0.568;AN=44;BaseQRankSum=4.041;DP=159;FS=12.648;HRun=2;HaplotypeScore=66.0297;InbreedingCoeff=0.2471;MQ=87.63;MQ0=39;MQRankSum=-0.694;QD=6.61;ReadPosRankSum=-0.837;VQSLOD=-0.7588;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:9:26.95:27,0,43	./.	0/0:28,1:11:20.05:0,20,282	0/0:39,0:17:21.51:0,22,206	./.	0/1:5,2:5:8.07:8,0,28	0/0:2,0:1:3.01:0,3,32	0/0:4,0:1:3:0,3,27	0/0:1,0:1:3.01:0,3,39	1/1:3,0:1:3.01:31,3,0	./.	1/1:3,0:2:3.01:41,3,0	1/1:4,0:2:3.01:37,3,0	./.	0/1:1,2:3:25.22:64,0,25	1/1:2,0:1:2.68:11,3,0	0/0:4,0:2:3.01:0,3,35	./.	./.	1/1:6,1:5:8.13:126,8,0	0/1:9,0:9:4.52:5,0,28	1/1:2,1:2:3.01:41,3,0	1/1:1,0:1:3.01:34,3,0	0/1:2,0:2:0:0,0,0	1/1:2,1:2:2.04:26,2,0	1/1:8,1:9:17.80:128,18,0	1/1:2,1:2:3:27,3,0	0/0:4,0:4:9.03:0,9,112
chr10	97251690	.	T	TC	307.18	PASS	AB=1.000;AC=17;AF=0.447;AN=38;BaseQRankSum=2.720;DP=141;FS=1.920;HRun=2;HaplotypeScore=61.9733;InbreedingCoeff=0.3711;MQ=95.11;MQ0=32;MQRankSum=-1.943;QD=8.78;ReadPosRankSum=-2.174;VQSLOD=0.4633;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:7:9.73:31,0,10	./.	0/0:30,0:12:21.59:0,22,266	0/0:39,0:17:7.57:0,8,178	./.	0/0:4,0:4:4.82:0,5,17	0/0:2,0:1:2.22:0,2,7	0/0:3,0:1:2.22:0,2,7	0/0:1,0:1:3:0,3,28	1/1:2,0:1:3.01:40,3,0	./.	./.	1/1:2,1:2:3:25,3,0	./.	0/1:3,0:3:1.93:24,0,2	1/1:1,1:1:2.04:6,2,0	0/0:4,0:2:2.22:0,2,7	./.	./.	1/1:3,2:4:5.21:74,5,0	0/0:9,0:8:1.89:0,2,4	1/1:1,0:2:3.01:41,3,0	./.	0/1:2,0:2:0:0,0,0	1/1:2,0:1:3.01:39,3,0	1/1:4,2:6:12.95:148,13,0	./.	0/0:4,0:4:8.22:0,8,69
chr10	97252719	.	TTC	T	306.41	PASS	AB=1.000;AC=24;AF=0.706;AN=34;BaseQRankSum=-2.008;DP=242;FS=0.000;HRun=0;HaplotypeScore=47.5721;InbreedingCoeff=0.2219;MQ=30.14;MQ0=51;MQRankSum=2.291;QD=2.53;ReadPosRankSum=1.724;VQSLOD=1.4281;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:14,0:12:1.25:3,1,0	./.	./.	./.	1/1:8,0:4:2.50:9,2,0	1/1:10,0:9:4.06:36,4,0	./.	0/1:8,0:6:28.62:55,0,29	1/1:9,0:5:8.92:80,9,0	1/1:6,0:5:3.01:32,3,0	1/1:10,0:8:5.52:25,6,0	1/1:8,0:7:7.89:49,8,0	1/1:12,0:11:10.33:39,10,0	0/0:9,0:6:2.99:0,3,23	./.	./.	0/0:5,0:3:0.47:0,0,1	1/1:12,0:9:3.01:30,3,0	0/0:9,0:7:0.89:0,1,2	0/1:7,0:5:3.41:5,0,3	0/0:11,0:9:1.25:0,1,4	1/1:6,0:6:2.84:14,3,0	1/1:11,0:8:5.64:27,6,0	./.
chr10	97252738	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCC	T	719.13	PASS	AB=0.855;AC=6;AF=0.125;AN=48;BaseQRankSum=5.341;DP=282;FS=0.000;HRun=0;HaplotypeScore=150.7349;InbreedingCoeff=0.1224;MQ=35.19;MQ0=43;MQRankSum=0.364;QD=16.34;ReadPosRankSum=-1.147;VQSLOD=2.4912;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:3:0:0,0,0	0/0:4,0:4:7.80:0,8,207	./.	./.	0/0:18,0:16:5.28:0,5,526	0/0:7,0:4:5.98:0,6,72	0/0:13,0:8:6.02:0,6,264	0/0:9,0:8:18.06:0,18,553	0/0:11,0:8:21.07:0,21,1569	0/0:9,0:8:15.79:0,16,1070	0/0:18,0:15:18.06:0,18,1380	0/0:9,0:6:15.05:0,15,1335	0/0:8,0:4:12.04:0,12,1113	0/0:9,0:8:12.51:0,13,599	0/0:14,0:13:24.08:0,24,1516	0/0:9,0:9:15.01:0,15,1201	0/0:19,0:18:33.06:0,33,2370	0/1:10,0:7:37.60:38,0,695	./.	./.	1/1:4,0:3:2.94:18,3,0	0/0:15,0:13:18.53:0,19,860	0/0:10,0:8:3.77:0,4,375	0/0:10,0:7:8.67:0,9,233	0/0:11,0:10:2:0,2,192	0/1:1,13:14:99:450,0,200	0/1:8,0:6:99:319,0,122	0/0:8,0:4:9.03:0,9,856
chr10	97253161	.	TTCTC	T	1431.28	PASS	AB=0.887;AC=22;AF=0.407;AN=54;BaseQRankSum=-0.017;DP=605;FS=6.183;HRun=0;HaplotypeScore=113.8713;InbreedingCoeff=0.0052;MQ=70.49;MQ0=18;MQRankSum=-0.634;QD=3.90;ReadPosRankSum=0.567;VQSLOD=1.8372;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:36:29.53:0,30,586	0/0:11,0:11:9.03:0,9,171	0/0:30,0:23:0:0,0,0	./.	0/1:27,3:30:58.43:70,0,58	0/1:14,1:15:5.98:41,0,6	0/1:17,3:23:59.82:154,0,60	0/0:35,0:35:3.01:0,3,40	0/0:9,0:9:14.45:0,14,205	0/0:20,0:25:27.14:0,27,203	0/1:21,0:21:18.45:40,0,18	1/1:5,7:12:15.05:231,15,0	1/1:9,8:18:15.04:213,15,0	1/1:13,10:24:18.01:259,18,0	0/1:22,0:21:1.85:2,0,218	0/1:12,1:16:28.50:28,0,230	0/1:35,1:38:23.48:23,0,732	0/1:19,1:23:24.93:25,0,122	0/1:14,0:13:15.43:15,0,61	0/0:21,0:21:5.54:0,6,27	0/0:17,0:17:8.98:0,9,88	0/0:12,0:12:14.72:0,15,238	1/1:11,5:17:5.67:75,6,0	1/1:9,7:20:11.61:275,12,0	0/1:22,0:27:25.30:34,0,25	0/1:22,1:24:33.87:79,0,34	0/1:13,1:17:32.04:32,0,73	0/0:12,0:13:2.92:0,3,17
chr10	97253280	.	AG	A	567.30	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.462;DP=600;FS=6.132;HRun=2;HaplotypeScore=57.3688;InbreedingCoeff=0.9874;MQ=85.23;MQ0=0;MQRankSum=-1.401;QD=29.86;ReadPosRankSum=0.427;VQSLOD=2.8188;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1639	0/0:11,0:11:33.10:0,33,473	0/0:19,0:19:54.18:0,54,809	0/0:25,0:25:58.21:0,58,897	0/0:26,0:26:75.25:0,75,1122	0/0:26,0:26:78.26:0,78,1161	0/0:27,0:27:75.25:0,75,1122	0/0:26,0:26:78.26:0,78,1169	0/0:16,0:16:48.13:0,48,672	0/0:21,0:21:57.19:0,57,854	0/0:12,0:12:36.12:0,36,537	0/0:20,0:20:54.18:0,54,808	0/0:17,0:17:51.17:0,51,764	0/0:19,0:19:57.19:0,57,853	0/0:20,0:20:60.19:0,60,878	0/0:19,0:19:57.19:0,57,851	0/0:24,0:24:69.23:0,69,1032	1/1:1,18:19:18:658,18,0	0/0:24,0:24:72.24:0,72,1076	0/0:16,0:16:48.16:0,48,717	0/0:34,0:34:93.29:0,93,1358	0/0:23,0:23:69.23:0,69,1033	0/0:19,0:19:54.18:0,54,809	0/0:29,0:29:87.27:0,87,1273	0/0:25,0:25:69.22:0,69,1014	0/0:23,0:23:69.23:0,69,1033	0/0:14,0:14:39.13:0,39,585	0/0:7,0:7:21.07:0,21,315
chr10	97255872	.	T	TG	4526.73	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.931;DP=539;FS=8.222;HRun=0;HaplotypeScore=63.8959;InbreedingCoeff=0.9837;MQ=87.32;MQ0=0;MQRankSum=-3.402;QD=40.06;ReadPosRankSum=-0.540;VQSLOD=4.8137;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1593	0/0:9,0:9:27.09:0,27,374	0/0:17,0:17:39.10:0,39,495	0/0:22,0:21:53.77:0,54,669	0/0:16,0:16:42.36:0,42,573	0/0:15,0:15:45.15:0,45,629	0/0:36,0:36:99:0,105,1450	0/0:21,0:21:60.19:0,60,823	0/0:26,0:26:75.22:0,75,1012	0/0:15,0:15:42.14:0,42,587	0/0:4,0:4:12.04:0,12,168	0/0:17,0:17:51.16:0,51,698	0/0:17,0:17:51.17:0,51,712	0/0:21,0:21:63.21:0,63,880	0/0:24,0:23:66.22:0,66,922	0/0:19,0:19:57.19:0,57,797	0/0:22,0:22:63.21:0,63,881	0/0:18,0:18:48.16:0,48,669	1/1:0,15:15:45.13:638,45,0	1/1:1,19:20:51.05:765,51,0	1/1:1,32:33:87.19:1278,87,0	0/0:12,0:12:36.12:0,36,500	0/0:6,0:6:18.06:0,18,247	0/0:29,0:29:87.23:0,87,1175	0/0:15,0:15:42.14:0,42,575	1/1:1,19:20:56.95:846,57,0	1/1:0,25:25:69.06:1000,69,0	0/0:5,0:5:12.04:0,12,163
chr10	97256625	.	A	AAAC	1801.91	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.006;DP=761;FS=7.301;HRun=0;HaplotypeScore=103.6011;InbreedingCoeff=0.9994;MQ=62.38;MQ0=6;MQRankSum=1.007;QD=39.17;ReadPosRankSum=3.886;VQSLOD=4.6795;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,39:46:87.30:1897,87,0	0/0:13,0:13:39.13:0,39,624	0/0:27,0:22:65.98:0,66,948	0/0:35,0:18:46.30:0,46,608	0/0:30,0:30:84.23:0,84,1294	0/0:29,0:29:81.23:0,81,1271	0/0:22,0:22:57.16:0,57,838	0/0:36,0:36:93.31:0,93,1443	0/0:27,0:27:78.25:0,78,1206	0/0:32,0:32:87.30:0,87,1388	0/0:31,0:31:87.27:0,87,1344	0/0:23,0:23:69.24:0,69,1101	0/0:21,0:21:57.19:0,57,898	0/0:22,0:22:63.20:0,63,986	0/0:21,0:21:51.17:0,51,815	0/0:23,0:23:66.20:0,66,1012	0/0:29,0:29:84.25:0,84,1279	0/0:25,0:25:54:0,54,991	0/0:17,0:16:48.16:0,48,764	0/0:31,0:31:81.26:0,81,1266	0/0:19,0:19:48.16:0,48,766	0/0:24,0:24:72.24:0,72,1136	0/0:30,0:30:84.25:0,84,1315	0/0:26,0:26:72.25:0,72,1155	0/0:33,0:33:96.26:0,96,1483	0/0:41,0:41:99:0,123,1966	0/0:36,0:34:99:0,99,1527	0/0:10,0:10:30.07:0,30,430
chr10	97256995	.	GCT	G	189.32	PASS	AB=0.923;AC=16;AF=0.364;AN=44;BaseQRankSum=3.873;DP=419;FS=1.047;HRun=0;HaplotypeScore=81.4022;InbreedingCoeff=0.1424;MQ=33.24;MQ0=88;MQRankSum=1.272;QD=1.25;ReadPosRankSum=2.509;VQSLOD=1.4183;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:9:2.98:0,3,21	./.	./.	./.	0/1:13,0:14:8.12:8,0,34	1/1:14,1:14:3.01:32,3,0	0/1:14,3:15:26.31:26,0,38	./.	0/0:9,2:10:0:0,0,0	0/0:19,0:20:9.87:0,10,214	./.	0/1:13,1:14:20.33:20,0,97	1/1:5,3:8:5.68:63,6,0	0/1:14,0:13:5.69:6,0,133	0/1:16,1:17:16.14:16,0,139	1/1:13,2:15:9.33:80,9,0	0/1:12,2:10:17.60:18,0,124	1/1:2,0:6:8.44:40,8,0	0/0:10,0:6:0:0,0,0	0/0:16,0:15:9.01:0,9,96	0/0:15,0:9:8.99:0,9,102	./.	1/1:13,0:14:2.84:14,3,0	0/0:19,1:20:4.38:0,4,182	0/0:19,0:19:12.04:0,12,163	0/0:11,0:10:3.01:0,3,39	0/0:10,0:10:3.44:0,3,21	0/0:19,0:18:7.25:0,7,66
chr10	97258501	.	AGTGTGTGCGT	A	3233.06	PASS	AB=0.941;AC=14;AF=0.250;AN=56;BaseQRankSum=4.759;DP=583;FS=3.585;HRun=0;HaplotypeScore=164.5006;InbreedingCoeff=0.8054;MQ=73.90;MQ0=7;MQRankSum=-0.159;QD=18.58;ReadPosRankSum=0.937;VQSLOD=2.9947;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:35:68.85:606,69,0	0/0:7,0:7:14.99:0,15,461	0/0:30,0:15:41.50:0,41,340	0/0:33,0:20:20.50:0,21,219	0/0:24,0:24:48.03:0,48,1273	0/0:19,0:19:54:0,54,1523	0/0:24,0:24:56.15:0,56,1237	0/0:30,0:30:58.91:0,59,695	0/0:17,0:17:34.15:0,34,649	0/0:23,0:22:62.45:0,62,1137	0/0:14,0:14:32.95:0,33,679	0/0:19,0:18:44.77:0,45,1321	0/0:15,0:14:30.02:0,30,1057	0/0:22,0:22:56.89:0,57,1604	0/1:11,0:10:3.95:4,0,329	0/0:6,0:6:8.91:0,9,274	0/0:29,0:29:61.36:0,61,1795	0/1:13,2:15:56.28:495,0,56	1/1:4,13:16:38.31:410,38,0	1/1:0,11:11:9.03:286,9,0	1/1:39,0:38:83.74:669,84,0	0/0:15,0:15:39.06:0,39,1025	0/0:18,0:18:42.02:0,42,1305	0/0:31,0:31:78.70:0,79,2013	0/0:19,0:19:42.05:0,42,1119	1/1:2,26:28:62.28:562,62,0	1/1:1,17:18:14.30:389,14,0	0/0:14,0:14:41.82:0,42,1345
chr10	97258507	.	TGC	T	2373.97	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=5.246;DP=582;FS=14.706;HRun=0;HaplotypeScore=85.8479;InbreedingCoeff=0.4238;MQ=71.11;MQ0=11;MQRankSum=-0.011;QD=8.16;ReadPosRankSum=-3.712;VQSLOD=1.4358;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:32:68.81:550,69,0	0/1:7,0:6:5.83:6,0,166	0/0:29,0:14:41.50:0,41,340	0/0:31,0:18:20.81:0,21,222	0/0:17,6:23:2.34:0,2,385	0/1:20,0:20:16.12:16,0,459	0/0:24,0:24:32.04:0,32,414	0/0:25,0:25:33.79:0,34,403	0/0:18,0:18:11.36:0,11,264	0/1:25,0:24:10.44:10,0,396	0/0:14,0:14:9.11:0,9,276	0/0:20,0:19:19.42:0,19,408	0/0:14,0:13:17.28:0,17,327	0/1:26,0:26:1.84:2,0,531	0/1:11,0:10:44.23:44,0,88	0/1:9,0:9:51.37:51,0,61	0/0:26,0:26:39.64:0,40,603	1/1:15,0:15:42.10:305,42,0	1/1:14,0:13:36.82:276,37,0	1/1:11,0:11:8.93:63,9,0	1/1:42,0:39:83.74:669,84,0	0/1:13,0:13:1.49:1,0,258	0/1:21,0:21:11.99:12,0,401	0/0:33,0:32:57.07:0,57,849	0/0:20,0:20:12.49:0,12,393	1/1:27,0:27:62.30:466,62,0	1/1:17,0:17:14.11:92,14,0	0/0:14,0:14:41.79:0,42,513
chr10	97258509	.	CGT	C	209.74	PASS	AB=0.972;AC=21;AF=0.404;AN=52;BaseQRankSum=5.440;DP=600;FS=4.161;HRun=0;HaplotypeScore=96.8709;InbreedingCoeff=0.0213;MQ=69.56;MQ0=13;MQRankSum=-1.438;QD=0.68;ReadPosRankSum=-1.211;VQSLOD=1.7061;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:30:2.84:14,3,0	0/1:7,0:6:8.80:9,0,80	./.	./.	0/1:23,0:23:4.38:4,0,197	0/1:18,0:20:0.20:0,0,230	0/1:24,1:25:14.39:14,0,162	0/0:26,0:26:4.72:0,5,35	0/0:17,0:17:6.57:0,7,108	0/1:25,1:25:48.22:48,0,126	0/0:14,0:14:9.02:0,9,106	0/0:21,0:20:27.86:0,28,360	0/0:14,0:13:16.55:0,17,190	0/1:23,1:24:31.35:31,0,253	0/1:14,0:13:0.63:1,0,81	0/1:10,1:10:56.69:62,0,57	0/0:26,0:27:20.71:0,21,411	0/1:15,0:15:14.80:20,0,15	1/1:20,0:19:2.97:16,3,0	1/1:11,0:11:8.52:42,9,0	0/0:43,0:39:1.53:0,2,23	0/1:14,1:15:22.97:23,0,139	0/0:23,0:23:23.10:0,23,278	0/0:34,0:33:3.80:0,4,425	0/1:21,0:21:7.35:7,0,238	1/1:28,0:27:2.79:13,3,0	1/1:17,0:17:10.88:55,11,0	0/0:14,0:14:21.07:0,21,311
chr10	97261318	.	TG	T	1826.01	PASS	AB=0.989;AC=8;AF=0.143;AN=56;BaseQRankSum=4.633;DP=687;FS=13.287;HRun=1;HaplotypeScore=72.8971;InbreedingCoeff=0.4149;MQ=64.84;MQ0=2;MQRankSum=-2.934;QD=11.86;ReadPosRankSum=-0.354;VQSLOD=0.6207;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:75.25:1046,75,0	0/0:10,0:10:30.09:0,30,413	0/0:28,0:22:64.04:0,64,810	0/0:15,0:15:42.14:0,42,574	0/0:31,0:31:93.26:0,93,1284	0/0:28,0:28:84.27:0,84,1202	0/0:26,0:26:78.19:0,78,1045	0/0:36,0:36:99:0,101,1421	0/0:27,0:27:81.26:0,81,1156	0/0:27,0:27:81.26:0,81,1148	0/0:21,0:21:60.15:0,60,806	0/0:25,0:25:75.22:0,75,1045	0/0:22,0:22:66.17:0,66,878	0/0:19,0:19:57.19:0,57,832	0/0:32,0:32:93.28:0,93,1311	0/0:20,0:20:60.18:0,60,840	0/0:42,0:42:99:0,123,1753	1/1:0,22:22:51.17:711,51,0	0/1:21,1:21:56.64:124,0,57	0/1:28,0:28:0.59:1,0,127	0/1:18,0:18:60.08:60,0,69	0/0:28,0:28:83.92:0,84,1157	0/0:25,0:25:59.33:0,59,975	0/0:26,0:26:78.25:0,78,1115	0/0:18,0:18:54.15:0,54,741	0/0:19,0:19:12.60:0,13,91	0/1:34,0:34:25.19:25,0,148	0/0:8,0:8:1.10:0,1,239
chr10	97262252	.	G	GGAATTA	11361.91	PASS	AB=0.900;AC=15;AF=0.268;AN=56;BaseQRankSum=-9.346;DP=609;FS=15.655;HRun=0;HaplotypeScore=123.3514;InbreedingCoeff=0.8926;MQ=91.15;MQ0=0;MQRankSum=-15.115;QD=77.29;ReadPosRankSum=0.009;VQSLOD=5.0044;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,13:19:36.12:1208,36,0	0/0:11,0:11:33.11:0,33,793	0/0:31,0:31:71.85:0,72,1804	0/0:24,0:24:69.21:0,69,1487	0/0:37,0:37:99:0,108,2513	0/0:27,0:27:78.25:0,78,1768	0/0:17,0:17:51.17:0,51,1195	0/0:30,0:30:75.26:0,75,1711	0/0:28,0:28:81.28:0,81,1946	0/0:19,0:19:54.18:0,54,1220	0/0:25,0:25:66.91:0,67,1603	0/0:15,0:15:42.14:0,42,1010	0/0:20,0:20:54.18:0,54,1250	0/0:14,0:14:42.14:0,42,981	0/0:18,0:18:54.15:0,54,1175	0/0:21,0:21:63.22:0,63,1450	0/0:22,0:22:63.22:0,63,1473	1/1:0,4:5:12.04:418,12,0	1/1:8,11:21:54.17:1739,54,0	1/1:2,24:29:72.25:2536,72,0	1/1:3,4:7:9.03:323,9,0	0/0:21,0:21:60.17:0,60,1273	0/0:33,0:33:99:0,99,2381	0/0:23,0:23:60.21:0,60,1401	0/0:26,0:26:75.21:0,75,1626	1/1:2,25:28:69.07:2405,69,0	1/1:5,23:28:78.27:2651,78,0	0/1:8,1:9:80.87:81,0,550
chr10	97262602	.	TAC	T	3067.12	PASS	AB=0.829;AC=15;AF=0.268;AN=56;BaseQRankSum=10.812;DP=835;FS=0.383;HRun=0;HaplotypeScore=150.3276;InbreedingCoeff=0.6852;MQ=63.79;MQ0=15;MQRankSum=-8.738;QD=11.36;ReadPosRankSum=1.559;VQSLOD=3.1093;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,18:39:5.81:530,0,6	0/0:10,0:10:27.08:0,27,400	0/0:52,0:27:32.81:0,33,372	0/0:62,0:29:36.68:0,37,442	0/1:22,4:26:86.63:87,0,721	0/0:18,1:19:5.21:0,5,593	0/0:29,1:30:23.32:0,23,877	0/1:28,2:30:1.62:2,0,962	0/0:30,0:30:66.22:0,66,1039	0/0:32,1:33:49.92:0,50,1239	0/0:18,0:18:45.13:0,45,674	0/0:22,0:22:63.20:0,63,977	0/0:26,1:27:1.18:0,1,825	0/0:26,0:26:68.79:0,69,981	0/0:41,1:42:65.53:0,66,1528	0/0:28,0:28:62.49:0,62,1006	0/0:31,0:30:75.25:0,75,1191	1/1:22,1:23:14.18:211,14,0	1/1:10,2:10:2.26:127,2,0	1/1:21,12:34:46.95:531,47,0	1/1:36,5:40:32.87:388,33,0	0/0:26,0:26:59.98:0,60,913	0/0:22,0:22:48.11:0,48,725	0/0:49,0:49:99:0,99,1543	0/0:23,0:23:48.16:0,48,779	1/1:26,15:39:59.99:860,60,0	1/1:15,9:23:35.81:513,36,0	0/0:15,0:15:36.43:0,36,632
chr10	97262616	.	C	CAT	944.81	PASS	AB=0.960;AC=8;AF=0.143;AN=56;BaseQRankSum=9.681;DP=925;FS=4.127;HRun=0;HaplotypeScore=189.8915;InbreedingCoeff=0.0780;MQ=53.77;MQ0=22;MQRankSum=-2.854;QD=4.13;ReadPosRankSum=-1.645;VQSLOD=2.8186;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:39:7.68:8,0,242	0/0:13,0:13:36.06:0,36,465	0/0:58,0:20:42.01:0,42,522	0/0:72,0:23:51.20:0,51,555	0/0:32,0:32:86.83:0,87,1035	0/0:23,0:22:57.50:0,57,725	0/0:35,0:35:80.96:0,81,1129	0/0:35,0:35:95.55:0,96,1193	0/0:29,0:29:74.79:0,75,1051	0/0:41,0:41:99:0,120,1548	0/0:22,0:22:57.06:0,57,740	0/0:24,0:24:69.15:0,69,938	0/0:29,0:28:74.40:0,74,984	0/0:30,0:30:84.19:0,84,1137	0/0:44,0:44:99:0,120,1650	0/0:31,0:31:93.19:0,93,1217	0/0:32,0:31:87.11:0,87,1223	0/1:15,6:22:12:427,0,12	0/1:11,0:9:32.38:32,0,57	0/1:44,0:44:60.70:86,0,61	0/1:45,0:43:61.68:123,0,62	0/0:24,0:24:63.18:0,63,916	0/0:20,0:20:57.12:0,57,761	0/0:54,0:54:99:0,123,1671	0/0:24,0:24:60.12:0,60,826	1/1:42,0:40:3.71:292,4,0	0/1:26,0:25:17.85:110,0,18	0/0:24,0:24:58.68:0,59,763
chr10	97262636	.	CA	C	717.13	PASS	AB=0.750;AC=5;AF=0.089;AN=56;BaseQRankSum=11.385;DP=958;FS=0.981;HRun=1;HaplotypeScore=202.5944;InbreedingCoeff=-0.0979;MQ=54.61;MQ0=16;MQRankSum=-7.620;QD=3.72;ReadPosRankSum=-1.137;VQSLOD=-0.4911;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:78:0,78,1002	0/0:12,0:12:33.11:0,33,496	0/0:54,0:17:48.07:0,48,607	0/0:74,0:29:71.03:0,71,916	0/0:34,0:34:91.54:0,92,1374	0/0:25,0:24:63.21:0,63,967	0/0:37,0:37:99:0,102,1565	0/0:32,0:32:93.27:0,93,1265	0/0:27,0:27:70.48:0,70,1053	0/0:43,0:43:99:0,126,1918	0/0:23,0:23:65.43:0,65,952	0/0:27,0:27:78.26:0,78,1178	0/0:24,0:23:69.22:0,69,1048	0/0:30,0:30:77.73:0,78,1120	0/0:40,0:40:99:0,112,1717	0/0:32,0:32:94.56:0,95,1448	0/0:32,0:31:90.31:0,90,1426	0/0:19,0:19:50.92:0,51,617	0/1:13,7:21:52.17:153,0,52	0/1:31,18:49:42.24:176,0,42	0/1:48,4:50:75.73:76,0,113	0/0:24,0:24:67.47:0,67,1037	0/0:23,0:23:64.46:0,64,1000	0/0:52,0:52:99:0,120,1993	0/0:30,0:30:75.72:0,76,1159	0/1:30,19:47:99:357,0,100	0/1:10,11:21:37.20:73,0,37	0/0:29,0:29:83.91:0,84,1240
chr10	97262638	.	CACT	C	1069.82	PASS	AB=0.810;AC=5;AF=0.089;AN=56;BaseQRankSum=12.563;DP=961;FS=1.456;HRun=0;HaplotypeScore=230.4784;InbreedingCoeff=0.0308;MQ=54.82;MQ0=16;MQRankSum=-9.707;QD=5.72;ReadPosRankSum=-0.746;VQSLOD=2.5180;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:27.34:0,27,683	0/0:12,0:12:27.09:0,27,599	0/0:56,0:20:57.14:0,57,972	0/0:78,0:32:74.06:0,74,1273	0/0:36,0:36:99:0,102,2075	0/0:25,0:24:56.87:0,57,1277	0/0:37,0:37:99:0,105,2215	0/0:33,0:33:87.29:0,87,1576	0/0:27,0:27:71.98:0,72,1483	0/0:42,0:42:99:0,117,2454	0/0:23,0:23:66.12:0,66,1325	0/0:28,0:28:81.28:0,81,1648	0/0:24,0:23:66.23:0,66,1422	0/0:29,0:29:80.70:0,81,1570	0/0:39,0:39:99:0,105,2242	0/0:32,0:32:96.06:0,96,2021	0/0:32,0:31:84.29:0,84,1913	0/0:19,0:19:10.67:0,11,342	0/1:19,2:21:12.17:263,0,12	0/1:29,17:46:28.43:213,0,28	0/1:49,2:50:35.23:35,0,77	0/0:25,0:25:71.98:0,72,1514	0/0:24,0:24:65.96:0,66,1392	0/0:51,0:51:99:0,129,2751	0/0:30,0:30:78.14:0,78,1608	0/1:35,13:47:86.74:498,0,87	0/1:10,11:21:3.05:177,0,3	0/0:30,0:30:1.60:0,2,1644
chr10	97262640	.	CT	C	827.94	PASS	AB=0.790;AC=5;AF=0.089;AN=56;BaseQRankSum=14.246;DP=952;FS=4.256;HRun=1;HaplotypeScore=198.9544;InbreedingCoeff=0.2043;MQ=55.30;MQ0=14;MQRankSum=-12.390;QD=4.55;ReadPosRankSum=1.117;VQSLOD=0.3979;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:26.26:0,26,410	0/0:11,0:11:27.09:0,27,431	0/0:53,2:21:60.15:0,60,903	0/0:73,3:33:71.27:0,71,1172	0/0:37,0:37:99:0,105,1633	0/0:26,0:25:43.46:0,43,973	0/0:38,0:38:99:0,108,1692	0/0:32,0:32:93.29:0,93,1425	0/0:27,0:27:72.24:0,72,1128	0/0:41,0:41:99:0,117,1865	0/0:23,0:23:66.22:0,66,1036	0/0:28,0:28:81.28:0,81,1286	0/0:25,0:24:69.18:0,69,1033	0/0:29,0:29:81.22:0,81,1223	0/0:37,0:37:99:0,106,1621	0/0:33,0:33:99:0,99,1556	0/0:30,0:29:84.29:0,84,1342	0/0:16,1:17:26.01:0,26,188	0/1:13,9:23:3.07:285,0,3	0/1:31,14:45:3.65:137,0,4	0/1:40,7:46:16.66:17,0,77	0/0:27,0:27:78.23:0,78,1179	0/0:24,0:24:69.23:0,69,1079	0/0:53,0:53:99:0,134,2101	0/0:30,0:30:78.22:0,78,1199	0/1:27,15:44:44.81:391,0,45	0/1:19,4:23:4.67:114,0,5	0/0:27,2:29:5.44:0,5,1189
chr10	97262675	.	AAG	A	3935.49	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.988;DP=936;FS=2.975;HRun=0;HaplotypeScore=218.8102;InbreedingCoeff=0.9834;MQ=61.56;MQ0=7;MQRankSum=-7.878;QD=14.74;ReadPosRankSum=1.276;VQSLOD=3.4045;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,26:35:57.01:678,57,0	0/0:13,0:13:39.13:0,39,628	0/0:54,0:40:71.43:0,71,995	0/0:59,1:45:56.82:0,57,827	0/0:28,1:29:7.47:0,7,885	0/0:27,0:27:63.21:0,63,1015	0/0:33,1:35:38.35:0,38,1029	0/0:30,1:31:20.23:0,20,795	0/0:23,0:23:60.20:0,60,977	0/0:46,0:46:99:0,106,1663	0/0:22,0:22:51.16:0,51,798	0/0:31,0:31:81.25:0,81,1272	0/0:26,0:26:66.19:0,66,1009	0/0:28,0:28:66.21:0,66,1035	0/0:27,1:28:29.29:0,29,984	0/0:28,1:29:41.32:0,41,1168	0/0:28,0:28:60.16:0,60,927	1/1:2,7:9:21.06:255,21,0	1/1:21,8:25:30.64:320,31,0	1/1:30,30:60:64.32:731,64,0	1/1:23,27:48:39.58:472,40,0	0/0:28,0:28:69.22:0,69,1102	0/0:21,0:21:51.16:0,51,799	0/0:53,0:53:99:0,132,2152	0/0:29,0:29:78.21:0,78,1215	1/1:34,23:58:23.38:986,23,0	1/1:14,12:25:51.70:493,52,0	0/0:27,0:27:54.11:0,54,779
chr10	97262678	.	AGAGAG	A	2773.18	PASS	AB=0.744;AC=5;AF=0.089;AN=56;BaseQRankSum=10.445;DP=939;FS=31.118;HRun=0;HaplotypeScore=268.0177;InbreedingCoeff=-0.1029;MQ=61.84;MQ0=8;MQRankSum=-11.913;QD=12.72;ReadPosRankSum=-1.489;VQSLOD=1.3342;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:34:5.39:0,5,883	0/0:13,0:13:39.13:0,39,1290	0/0:55,0:38:99:0,105,2544	0/0:63,0:45:99:0,114,2394	0/0:27,0:27:81.28:0,81,2309	0/0:26,0:26:75.26:0,75,2300	0/0:35,0:35:97.93:0,98,2650	0/0:33,0:33:99:0,99,2485	0/0:25,0:25:72.25:0,72,2252	0/0:50,0:50:99:0,149,4271	0/0:21,0:21:60.20:0,60,1781	0/0:29,0:29:84.27:0,84,2660	0/0:24,0:24:72.23:0,72,2197	0/0:28,0:28:78.27:0,78,2307	0/0:28,0:28:81.28:0,81,2359	0/0:28,0:28:84.29:0,84,2638	0/0:30,0:29:87.30:0,87,2377	0/0:10,0:10:30.10:0,30,428	0/1:14,7:25:99:485,0,476	0/1:38,16:59:99:659,0,697	0/1:40,0:47:99:136,0,529	0/0:29,0:29:87.28:0,87,2616	0/0:22,0:22:66.23:0,66,1935	0/0:54,0:54:99:0,141,4533	0/0:31,0:31:87.27:0,87,2637	0/1:35,16:55:99:1142,0,1300	0/1:17,7:25:99:467,0,425	0/0:26,0:26:78.26:0,78,2042
chr10	97262722	.	A	AAC	2515.71	PASS	AB=0.688;AC=13;AF=0.232;AN=56;BaseQRankSum=12.772;DP=897;FS=4.306;HRun=0;HaplotypeScore=192.1570;InbreedingCoeff=0.8917;MQ=56.47;MQ0=10;MQRankSum=-6.955;QD=9.60;ReadPosRankSum=-4.712;VQSLOD=2.5003;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:20,10:33:40.97:396,41,0	0/0:14,0:14:39.09:0,39,456	0/0:55,0:30:39.49:0,39,432	0/0:60,0:29:19.39:0,19,320	0/0:23,0:23:57.18:0,57,696	0/0:21,0:21:51.15:0,51,611	0/0:26,0:26:60.19:0,60,731	0/0:29,0:30:57:0,57,664	0/0:30,0:30:66.16:0,66,790	0/0:48,0:49:99:0,126,1500	0/0:16,0:16:36.11:0,36,437	0/0:33,0:33:78.24:0,78,951	0/0:21,0:21:60.17:0,60,718	0/0:25,0:25:63.18:0,63,751	0/0:30,0:31:76.62:0,77,897	0/0:23,0:23:57.17:0,57,684	0/0:28,0:27:84.26:0,84,1025	0/1:6,4:11:17.96:219,0,18	1/1:25,2:24:10.87:247,11,0	1/1:36,13:49:26.26:282,26,0	1/1:51,5:54:57.05:304,57,0	0/0:31,0:31:75.22:0,75,903	0/0:21,0:22:63:0,63,722	0/0:56,0:56:69.37:0,69,1358	0/0:29,0:29:57.13:0,57,679	1/1:50,14:63:77.50:984,77,0	1/1:22,0:21:41.97:272,42,0	0/0:11,0:10:24.08:0,24,293
chr10	97262738	.	C	CA	4838.39	PASS	AB=0.763;AC=12;AF=0.214;AN=56;BaseQRankSum=8.616;DP=821;FS=5.267;HRun=1;HaplotypeScore=144.8697;InbreedingCoeff=0.7711;MQ=59.92;MQ0=7;MQRankSum=-6.007;QD=20.59;ReadPosRankSum=-2.225;VQSLOD=4.1677;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,2:31:40.80:416,41,0	0/0:13,0:13:39.13:0,39,540	0/0:52,0:31:71.89:0,72,888	0/0:48,0:30:6.12:0,6,603	0/0:20,0:20:60.20:0,60,833	0/0:19,0:20:57.18:0,57,774	0/0:28,0:28:78.24:0,78,1058	0/0:25,0:25:72.18:0,72,956	0/0:25,0:25:72.24:0,72,995	0/0:50,0:50:99:0,147,1999	0/0:15,0:15:42.14:0,42,579	0/0:27,0:27:78.26:0,78,1077	0/0:22,0:22:63.19:0,63,850	0/0:23,0:23:69.19:0,69,892	0/0:30,0:30:84.18:0,84,1121	0/0:24,0:24:72.23:0,72,976	0/0:28,0:27:84.28:0,84,1167	0/1:9,1:11:17.67:148,0,18	0/1:9,8:16:42.82:313,0,43	1/1:24,17:40:58.16:756,58,0	1/1:17,34:49:76.20:1126,76,0	0/0:28,0:28:84.26:0,84,1144	0/0:23,0:23:66.16:0,66,874	0/0:49,0:49:25.20:0,25,1652	0/0:24,0:25:65.10:0,65,922	1/1:27,33:58:57.50:1464,57,0	1/1:5,18:22:44.22:615,44,0	0/0:9,0:8:24.08:0,24,334
chr10	97262785	.	G	GGAGA	139.68	PASS	AB=1.000;AC=13;AF=0.295;AN=44;BaseQRankSum=-1.767;DP=602;FS=17.404;HRun=0;HaplotypeScore=149.8562;InbreedingCoeff=0.4908;MQ=60.69;MQ0=16;MQRankSum=-1.154;QD=0.66;ReadPosRankSum=-2.316;VQSLOD=1.2795;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/1:34,0:22:0:0,0,0	0/0:15,0:15:9.03:0,9,137	0/1:14,0:14:0:0,0,0	0/1:21,0:20:0:1,0,0	1/1:33,0:33:5.67:13,6,0	0/0:19,0:17:8.71:0,9,98	0/1:35,0:35:3.25:3,0,104	./.	0/0:23,0:23:11.82:0,12,155	0/1:11,0:11:0:0,0,0	0/0:27,0:27:14.64:0,15,177	0/0:34,0:36:27.03:0,27,333	0/0:26,0:25:12.27:0,12,142	1/1:18,6:27:11.77:182,12,0	./.	0/0:14,0:14:5.97:0,6,48	./.	0/0:36,0:36:2.95:0,3,28	0/0:20,0:20:6.01:0,6,70	1/1:18,0:19:2.74:12,3,0	0/0:27,0:30:18.52:0,19,239	1/1:17,0:16:3.01:42,3,0	0/0:28,0:28:9.31:0,9,93	0/0:17,0:16:2.65:0,3,27	0/0:6,0:6:0:0,0,0
chr10	97262957	.	AT	A	3467.44	PASS	AB=0.755;AC=14;AF=0.250;AN=56;BaseQRankSum=10.756;DP=595;FS=2.060;HRun=10;HaplotypeScore=59.9896;InbreedingCoeff=0.8305;MQ=69.82;MQ0=0;MQRankSum=-0.857;QD=19.48;ReadPosRankSum=1.582;VQSLOD=4.7021;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:27:35.80:540,36,0	0/0:12,0:12:33.07:0,33,354	0/1:12,1:13:4.97:5,0,161	0/0:9,0:10:26.91:0,27,259	0/0:30,0:32:61.41:0,61,827	0/0:14,0:14:37.34:0,37,401	0/0:25,1:26:46.12:0,46,726	0/0:31,0:30:63.16:0,63,689	0/0:18,0:18:42.07:0,42,451	0/0:35,0:37:99:0,103,1111	0/0:16,0:16:39.07:0,39,419	0/0:24,0:24:69.15:0,69,750	0/0:12,0:13:23.90:0,24,246	0/0:18,0:18:48.12:0,48,520	0/0:21,0:23:62.84:0,63,659	0/0:22,0:23:62.99:0,63,670	0/0:12,0:12:33.09:0,33,365	1/1:1,11:12:32.99:286,33,0	0/1:5,13:18:21.38:291,0,21	1/1:6,22:28:65.98:573,66,0	1/1:2,23:25:68.97:599,69,0	0/0:21,0:21:63.14:0,63,674	0/0:20,0:20:47.89:0,48,498	0/0:22,0:22:51.08:0,51,541	0/0:24,0:27:66.01:0,66,711	1/1:4,32:36:35.61:757,36,0	1/1:2,17:19:47.98:417,48,0	0/0:18,0:18:42.08:0,42,444
chr10	97264093	.	AGT	A	444.41	PASS	AB=0.888;AC=15;AF=0.278;AN=54;BaseQRankSum=4.656;DP=703;FS=0.000;HRun=0;HaplotypeScore=101.2171;InbreedingCoeff=-0.2152;MQ=64.46;MQ0=8;MQRankSum=-2.794;QD=1.33;ReadPosRankSum=0.679;VQSLOD=1.8201;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:50:11.44:103,11,0	0/1:3,1:5:35.50:36,0,76	0/0:29,0:15:2.97:0,3,20	./.	0/1:15,0:16:3.09:3,0,349	0/0:18,0:21:24.07:0,24,341	0/0:24,1:25:2.70:0,3,417	0/1:30,0:30:23.21:23,0,95	0/1:19,1:18:0.30:0,0,396	0/1:24,4:28:99:102,0,385	0/0:14,0:14:24.08:0,24,360	0/0:17,0:16:27.56:0,28,401	0/0:24,0:25:18.98:0,19,438	0/1:15,1:16:12.35:12,0,215	0/1:19,3:22:36.66:37,0,329	0/0:8,0:19:42.03:0,42,441	0/1:24,4:28:45.95:46,0,616	0/0:18,0:27:29.97:0,30,284	0/0:12,0:20:17.70:0,18,133	0/0:13,0:28:2.05:0,2,120	0/0:39,1:64:21.15:0,21,186	0/1:21,4:25:39.70:40,0,241	0/1:19,1:20:24.42:24,0,460	0/1:33,2:39:9.60:10,0,637	0/1:15,4:20:74.82:75,0,352	0/0:14,0:27:43.96:0,44,361	0/0:13,0:25:21.47:0,21,201	0/1:11,3:14:82.10:82,0,95
chr10	97268330	.	C	CGT	457.14	PASS	AB=0.971;AC=9;AF=0.161;AN=56;BaseQRankSum=5.152;DP=522;FS=1.546;HRun=0;HaplotypeScore=103.4188;InbreedingCoeff=0.3303;MQ=50.83;MQ0=12;MQRankSum=-4.165;QD=3.05;ReadPosRankSum=-2.811;VQSLOD=1.7404;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:35:8.92:9,0,70	0/0:7,0:7:15:0,15,214	0/0:18,0:10:20.88:0,21,239	0/0:15,0:7:20.85:0,21,245	0/0:8,0:8:21.07:0,21,300	0/0:17,0:17:45.15:0,45,632	0/0:31,0:31:81.25:0,81,1135	0/0:16,0:14:39.05:0,39,498	0/0:24,0:24:66.22:0,66,939	0/0:17,0:17:39.13:0,39,556	0/0:9,0:9:21.04:0,21,277	0/0:21,0:20:54.15:0,54,733	0/0:17,0:17:45.13:0,45,622	0/0:19,0:19:51.17:0,51,720	0/0:19,0:19:51.10:0,51,653	0/0:13,0:13:36.12:0,36,515	0/0:42,0:42:99:0,110,1483	0/1:9,0:8:5.67:6,0,37	0/1:16,0:14:64.85:131,0,65	1/1:11,2:11:4.26:48,4,0	0/1:44,1:43:11.36:18,0,11	0/0:15,0:14:36.12:0,36,514	0/0:13,0:13:30.09:0,30,410	0/0:29,0:29:60.10:0,60,789	0/0:14,0:14:33.07:0,33,433	1/1:21,3:22:14.57:360,15,0	0/1:6,1:7:9.68:24,0,10	0/0:8,0:8:24.08:0,24,335
chr10	97268332	.	TGC	T	525.40	PASS	AB=0.923;AC=9;AF=0.161;AN=56;BaseQRankSum=6.471;DP=519;FS=2.160;HRun=0;HaplotypeScore=93.2128;InbreedingCoeff=0.3426;MQ=50.70;MQ0=13;MQRankSum=-5.138;QD=3.53;ReadPosRankSum=-1.702;VQSLOD=2.2795;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,3:35:65.59:149,0,66	0/0:7,0:7:15.05:0,15,271	0/0:17,0:9:20.88:0,21,246	0/0:15,0:7:20.64:0,21,235	0/0:8,0:8:21.07:0,21,380	0/0:17,0:17:44.51:0,45,725	0/0:30,0:30:81.26:0,81,1336	0/0:15,0:13:39.11:0,39,587	0/0:25,0:25:72.24:0,72,1210	0/0:17,0:17:45.04:0,45,713	0/0:9,0:9:21.07:0,21,298	0/0:20,0:19:54.17:0,54,940	0/0:17,0:17:48.16:0,48,784	0/0:18,0:18:54.18:0,54,913	0/0:19,0:19:54.14:0,54,865	0/0:14,0:14:39.12:0,39,681	0/0:42,0:42:99:0,106,1822	0/1:5,0:8:1.92:84,0,2	0/1:15,0:13:90.64:91,0,96	1/1:12,1:11:5.37:33,5,0	0/1:47,0:45:12.53:40,0,13	0/0:16,0:15:39.13:0,39,636	0/0:13,0:13:30.10:0,30,464	0/0:29,0:29:63.18:0,63,1041	0/0:14,0:14:38.74:0,39,591	1/1:23,1:22:6.78:245,7,0	0/1:5,0:5:24.25:24,0,26	0/0:8,0:8:24.08:0,24,366
chr10	97268365	.	ATG	A	2746.57	PASS	AB=0.963;AC=15;AF=0.268;AN=56;BaseQRankSum=10.264;DP=679;FS=18.189;HRun=0;HaplotypeScore=127.8418;InbreedingCoeff=0.8937;MQ=55.75;MQ0=11;MQRankSum=-1.824;QD=13.53;ReadPosRankSum=-4.973;VQSLOD=1.2375;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:18,13:31:43.34:498,43,0	0/0:5,0:5:15.05:0,15,242	0/0:33,0:15:38.99:0,39,561	0/0:20,0:9:23.43:0,23,268	0/0:18,0:18:48.16:0,48,790	0/0:26,1:27:35.57:0,36,1039	0/0:36,0:36:62.77:0,63,1220	0/1:25,0:23:12.46:12,0,690	0/0:30,0:30:69.24:0,69,1139	0/0:29,0:29:63.21:0,63,1028	0/0:12,0:12:30.10:0,30,494	0/0:30,0:29:66.23:0,66,1083	0/0:24,0:24:66.22:0,66,1071	0/0:25,2:27:31.67:0,32,999	0/0:20,0:20:48.16:0,48,793	0/0:19,0:19:51.14:0,51,802	0/0:45,0:45:99:0,115,1856	1/1:13,3:15:10.87:145,11,0	1/1:14,9:22:11.01:267,11,0	1/1:4,12:17:24.03:274,24,0	1/1:22,25:46:52.96:712,53,0	0/0:16,0:16:42.14:0,42,694	0/0:15,0:15:36.12:0,36,592	0/0:38,1:39:64.78:0,65,1541	0/0:22,0:22:48.28:0,48,791	1/1:8,25:32:70.86:839,71,0	1/1:0,9:9:17.54:196,18,0	0/0:9,0:9:24.08:0,24,396
chr10	97268520	.	GTA	G	2004.91	PASS	AB=0.851;AC=17;AF=0.304;AN=56;BaseQRankSum=13.095;DP=1140;FS=34.075;HRun=0;HaplotypeScore=233.9261;InbreedingCoeff=-0.3824;MQ=50.86;MQ0=13;MQRankSum=-12.048;QD=2.86;ReadPosRankSum=0.124;VQSLOD=1.3577;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,3:56:18.95:0,19,2317	0/1:10,2:12:42.68:43,0,356	0/1:36,7:25:99:100,0,606	0/1:56,16:50:99:242,0,1391	0/1:31,13:44:0.75:1,0,641	0/0:27,1:28:33.19:0,33,1276	0/1:36,14:49:99:273,0,1218	0/1:54,18:66:99:500,0,1985	0/0:43,1:44:74.34:0,74,1977	0/1:36,13:47:99:467,0,1309	0/1:20,9:29:5.84:6,0,432	0/1:25,3:28:47.61:48,0,1214	0/1:29,2:31:1.63:2,0,1298	0/0:30,2:32:41.06:0,41,1362	0/1:32,3:35:32.54:33,0,1408	0/0:28,0:28:78.25:0,78,1390	0/0:31,0:31:77.40:0,77,1413	0/0:24,1:25:21.14:0,21,1078	0/1:33,11:41:99:136,0,1260	0/1:38,12:49:99:156,0,787	0/0:96,7:102:99:0,107,4106	0/0:36,2:38:78.09:0,78,1399	0/1:31,5:34:44.11:44,0,617	0/0:33,1:34:78.37:0,78,1410	0/1:20,1:20:0.81:1,0,671	0/1:55,6:61:82.21:82,0,2604	0/1:21,2:23:22.23:22,0,926	0/0:20,0:20:54.66:0,55,988
chr10	97268878	.	G	GA	6010.20	PASS	AB=0.862;AC=22;AF=0.393;AN=56;BaseQRankSum=20.431;DP=1704;FS=134.952;HRun=0;HaplotypeScore=669.7723;InbreedingCoeff=-0.6506;MQ=36.44;MQ0=11;MQRankSum=-10.822;QD=4.27;ReadPosRankSum=3.075;VQSLOD=1.2381;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:38:13.68:0,14,608	0/1:16,12:28:99:289,0,221	0/1:66,8:32:83.70:84,0,701	0/1:79,10:49:99:245,0,1001	0/1:47,20:67:50.82:51,0,382	0/1:47,2:49:47.63:48,0,633	0/1:62,3:65:94.75:95,0,1084	0/1:100,19:93:99:835,0,1583	0/1:63,5:67:75.20:75,0,1259	0/1:78,34:111:99:1427,0,1040	0/1:37,32:69:99:280,0,407	0/0:47,2:49:69.80:0,70,979	0/0:48,3:51:15.67:0,16,636	0/0:56,2:58:24.22:0,24,1041	0/0:56,1:56:70.79:0,71,1165	0/1:41,2:43:55.02:55,0,667	0/1:36,1:37:68.46:68,0,511	0/1:19,0:19:99:106,0,274	0/1:30,3:25:99:207,0,401	0/1:52,23:74:99:228,0,471	0/1:88,8:90:43.64:44,0,1463	0/1:63,23:86:99:262,0,680	0/1:59,10:69:94.97:95,0,444	0/0:41,1:42:31.41:0,31,747	0/1:53,13:67:99:205,0,395	0/1:56,16:68:99:874,0,630	0/1:29,3:32:82.27:82,0,511	0/1:29,11:40:99:355,0,734
chr10	97268886	.	GTA	G	4783.95	PASS	AB=0.864;AC=20;AF=0.357;AN=56;BaseQRankSum=19.693;DP=1762;FS=70.261;HRun=0;HaplotypeScore=689.3170;InbreedingCoeff=-0.5409;MQ=37.49;MQ0=7;MQRankSum=-14.018;QD=3.65;ReadPosRankSum=0.554;VQSLOD=-0.2826;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,1:40:57.33:0,57,1020	0/1:18,11:29:99:288,0,354	0/1:73,10:41:99:200,0,885	0/1:87,4:47:99:219,0,1091	0/1:50,20:70:40.82:41,0,539	0/1:49,2:51:82.17:82,0,932	0/0:64,3:67:72.59:0,73,1793	0/1:109,11:98:73.16:73,0,2410	0/0:64,4:68:11.36:0,11,1622	0/1:79,34:112:99:1290,0,1687	0/1:42,31:73:99:305,0,681	0/0:51,2:53:83.68:0,84,1487	0/1:50,3:53:79.24:79,0,899	0/1:58,2:60:49.76:50,0,1589	0/0:60,1:60:72.63:0,73,1787	0/1:43,2:45:87.88:88,0,929	0/1:37,2:39:1.55:2,0,705	0/0:20,0:20:28.62:0,29,444	0/1:28,3:23:29.23:29,0,414	0/1:58,21:78:99:317,0,842	0/0:94,5:95:99:0,119,2362	0/1:66,20:86:99:305,0,1255	0/1:61,10:71:99:175,0,643	0/0:42,1:43:66.77:0,67,1155	0/1:56,14:70:99:231,0,583	0/1:55,15:67:99:550,0,1000	0/1:29,3:32:99:173,0,687	0/1:32,11:43:99:290,0,1022
chr10	97272023	.	CGTGTGT	C	83.49	PASS	AB=1.000;AC=9;AF=0.173;AN=52;BaseQRankSum=3.267;DP=445;FS=0.000;HRun=0;HaplotypeScore=95.6469;InbreedingCoeff=0.3868;MQ=65.99;MQ0=15;MQRankSum=2.031;QD=0.99;ReadPosRankSum=2.636;VQSLOD=1.6394;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:22:3.01:42,3,0	0/0:5,0:5:3.01:0,3,59	0/0:21,0:13:2.92:0,3,17	0/0:23,0:18:9.86:0,10,113	0/0:5,0:5:6.02:0,6,144	0/0:11,0:11:6.26:0,6,131	0/0:20,0:20:18.49:0,18,326	0/0:21,0:20:15.01:0,15,230	0/0:18,0:18:6.01:0,6,65	0/0:20,0:18:22.32:0,22,388	0/0:16,0:16:6.25:0,6,128	1/1:15,0:15:1.87:20,2,0	1/1:9,0:8:5.93:73,6,0	1/1:7,0:7:2.98:21,3,0	0/0:11,0:11:9.50:0,10,165	0/0:10,0:10:9.03:0,9,184	0/0:26,0:24:15.50:0,15,246	0/0:16,11:27:3.24:0,3,21	./.	0/0:7,0:6:6.02:0,6,95	0/0:38,0:35:24.04:0,24,469	./.	0/0:5,0:8:3.01:0,3,61	0/1:30,0:28:28.93:51,0,29	0/0:14,0:14:15.52:0,16,286	0/0:12,0:10:9.85:0,10,130	0/0:9,0:9:15.05:0,15,309	0/0:10,0:9:9.02:0,9,183
chr10	97272063	.	TGAGAGAGAGAGAGAGAGAGA	T	121.24	PASS	AB=0.613;AC=1;AF=0.020;AN=50;BaseQRankSum=2.044;DP=314;FS=0.000;HRun=0;HaplotypeScore=137.9553;InbreedingCoeff=-0.0588;MQ=42.09;MQ0=24;MQRankSum=-1.815;QD=6.38;ReadPosRankSum=1.333;VQSLOD=2.3143;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,11:18:10.96:194,0,11	./.	./.	./.	0/0:5,0:8:6.02:0,6,322	0/0:8,0:7:5.80:0,6,286	0/0:23,0:21:24.97:0,25,1213	0/0:10,0:10:3.01:0,3,41	0/0:18,0:15:6.96:0,7,304	0/0:15,0:14:21.07:0,21,1079	0/0:12,0:12:15.05:0,15,775	0/0:5,0:5:9.03:0,9,393	0/0:11,0:11:22.01:0,22,1146	0/0:9,0:8:15.05:0,15,820	0/0:8,0:8:6.02:0,6,475	0/0:9,0:9:6.10:0,6,343	0/0:19,0:16:27.08:0,27,1507	0/0:15,0:14:6.02:0,6,106	0/0:6,0:3:3.01:0,3,211	0/0:9,0:8:9.03:0,9,387	0/0:16,0:14:6.49:0,6,358	0/0:14,0:14:6.14:0,6,419	0/0:10,0:9:5.90:0,6,265	0/0:30,0:27:33.60:0,34,1545	0/0:7,0:7:6.02:0,6,262	0/0:10,0:7:18.06:0,18,1288	0/0:13,0:11:15.05:0,15,811	0/0:7,0:4:3.01:0,3,87
chr10	97272123	.	G	GT	426.06	PASS	AB=0.837;AC=13;AF=0.232;AN=56;BaseQRankSum=4.688;DP=348;FS=14.925;HRun=0;HaplotypeScore=64.2783;InbreedingCoeff=-0.1734;MQ=61.10;MQ0=13;MQRankSum=-5.800;QD=4.22;ReadPosRankSum=-0.542;VQSLOD=1.8405;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:8.99:0,9,104	1/1:0,3:3:5.75:52,6,0	0/0:50,0:21:28.15:0,28,376	0/0:66,0:24:56.15:0,56,652	0/0:7,4:11:17.83:0,18,250	0/1:3,1:3:32.93:71,0,33	0/0:18,0:18:48.14:0,48,648	0/0:5,0:5:15.01:0,15,187	0/1:11,1:12:20.36:20,0,132	0/1:12,2:13:76.06:76,0,259	0/0:5,0:5:14.08:0,14,174	0/1:3,2:4:21.64:22,0,51	0/0:9,1:9:0.10:0,0,306	0/0:6,0:5:14.96:0,15,185	0/1:6,1:6:12.59:13,0,75	0/1:6,1:6:16.52:17,0,93	0/0:11,1:9:5.57:0,6,212	0/0:6,0:5:15.05:0,15,210	0/0:6,0:6:14.96:0,15,163	0/1:8,2:10:52.34:52,0,185	0/0:4,0:4:6.02:0,6,78	0/0:8,3:10:18.05:0,18,251	0/0:2,1:3:3.01:0,3,42	0/0:17,1:15:37.01:0,37,500	0/1:8,3:10:68.31:68,0,108	0/1:15,1:14:0.49:0,0,446	0/1:5,0:5:23.04:23,0,153	0/1:2,5:7:24.01:157,0,24
chr10	97272125	.	A	AT	443.45	PASS	AB=0.733;AC=16;AF=0.286;AN=56;BaseQRankSum=5.509;DP=322;FS=28.105;HRun=0;HaplotypeScore=57.7485;InbreedingCoeff=-0.2549;MQ=64.43;MQ0=8;MQRankSum=-6.922;QD=4.03;ReadPosRankSum=-0.340;VQSLOD=1.4452;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:9.03:0,9,120	1/1:0,3:3:5.05:47,5,0	0/0:50,0:22:38.37:0,38,395	0/0:68,0:24:52.25:0,52,624	0/0:6,4:11:17.66:0,18,242	0/1:1,1:3:32.94:71,0,33	0/0:15,0:17:38.01:0,38,580	0/0:5,0:5:15.04:0,15,189	0/1:6,1:10:20.39:20,0,110	0/1:7,2:10:79.15:79,0,225	0/0:5,0:5:12.93:0,13,170	0/1:3,2:4:21.08:21,0,57	0/1:8,1:9:0.90:1,0,273	0/1:5,0:5:3.57:4,0,153	0/1:2,1:6:15.93:16,0,75	0/1:2,1:5:23.39:23,0,36	0/1:6,1:8:9.89:10,0,189	0/0:6,0:5:15.05:0,15,204	0/0:4,0:4:8.88:0,9,119	0/1:6,2:9:53.23:53,0,183	0/0:4,0:4:3.01:0,3,42	0/0:6,3:10:15.90:0,16,245	0/0:2,1:3:3.01:0,3,42	0/0:16,1:14:36.59:0,37,496	0/1:4,3:9:62.05:62,0,94	0/1:11,1:12:6.34:6,0,419	0/1:4,0:5:23.02:23,0,152	0/1:2,5:7:24.02:157,0,24
chr10	97272130	.	G	GAT	179.68	PASS	AB=0.906;AC=11;AF=0.196;AN=56;BaseQRankSum=5.846;DP=307;FS=18.235;HRun=0;HaplotypeScore=63.6387;InbreedingCoeff=-0.2521;MQ=66.80;MQ0=8;MQRankSum=-6.480;QD=2.50;ReadPosRankSum=0.667;VQSLOD=0.0335;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:9.03:0,9,138	0/1:3,0:3:10.24:16,0,10	0/0:50,0:23:37.79:0,38,431	0/0:60,0:22:47.71:0,48,586	0/0:10,1:11:12.93:0,13,185	0/1:2,1:3:37.89:51,0,38	0/0:14,1:15:19.46:0,19,530	0/0:4,0:4:12.04:0,12,184	0/1:8,2:10:12.06:12,0,126	0/1:9,1:10:29.86:30,0,206	0/0:4,0:4:12.01:0,12,160	0/1:5,0:4:6.61:7,0,82	0/0:10,0:9:20.65:0,21,308	0/0:5,0:5:10.97:0,11,159	0/1:5,1:6:41.61:42,0,83	0/1:5,0:5:27.19:27,0,35	0/0:9,0:8:14.06:0,14,168	0/0:6,0:4:12.04:0,12,184	0/0:3,0:3:9.03:0,9,137	0/1:9,1:10:52.76:53,0,102	0/0:4,0:4:6.02:0,6,85	0/0:9,1:10:18.52:0,19,268	0/0:4,0:4:3.01:0,3,46	0/0:15,0:12:30.10:0,30,459	0/1:8,1:9:14.56:15,0,80	0/0:12,0:12:30.02:0,30,500	0/1:3,1:4:33.22:33,0,126	0/1:6,0:6:38.20:39,0,38
chr10	97273932	.	GGT	G	366.34	PASS	AB=0.968;AC=17;AF=0.304;AN=56;BaseQRankSum=6.156;DP=707;FS=5.382;HRun=0;HaplotypeScore=99.2484;InbreedingCoeff=0.1700;MQ=60.26;MQ0=19;MQRankSum=-3.480;QD=1.00;ReadPosRankSum=1.134;VQSLOD=1.6271;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:5.79:0,6,39	0/0:8,0:7:12.04:0,12,183	0/0:23,0:12:9.03:0,9,119	0/0:50,1:22:14.94:0,15,174	0/0:14,0:13:9.02:0,9,114	0/1:25,0:26:2.30:2,0,340	0/1:30,1:31:37.78:38,0,260	0/1:45,0:37:23.56:24,0,192	0/0:24,0:20:24.97:0,25,355	0/0:28,0:27:24.02:0,24,296	0/0:11,0:11:9.02:0,9,105	0/0:34,1:35:5.19:0,5,542	0/0:14,0:14:24.02:0,24,314	0/0:26,0:26:32.10:0,32,449	0/1:24,1:24:15.57:16,0,242	0/0:10,0:10:9.03:0,9,132	0/1:27,2:30:57.72:58,0,481	0/1:17,0:13:30.92:31,0,91	1/1:23,0:17:17.36:110,17,0	1/1:18,0:17:5.51:57,6,0	1/1:79,0:74:6.02:67,6,0	0/0:20,0:20:24.08:0,24,360	0/1:13,1:15:16.14:16,0,186	0/0:33,0:31:3.18:0,3,477	0/0:15,0:15:11.14:0,11,255	0/1:29,0:25:2.67:24,0,3	1/1:14,0:14:11.82:78,12,0	0/1:13,1:14:13.94:14,0,189
chr10	97273956	.	TGTGTGTG	T	1069.67	PASS	AB=0.876;AC=9;AF=0.161;AN=56;BaseQRankSum=5.561;DP=932;FS=12.903;HRun=0;HaplotypeScore=158.6221;InbreedingCoeff=0.0536;MQ=39.40;MQ0=122;MQRankSum=-5.568;QD=2.96;ReadPosRankSum=0.420;VQSLOD=2.2125;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:33:45.99:46,0,67	0/0:9,0:6:15.05:0,15,464	0/0:46,0:5:9.03:0,9,144	0/0:73,0:11:23.95:0,24,272	0/0:18,0:15:12.03:0,12,316	0/0:27,0:24:12.52:0,13,1287	0/0:39,0:34:39.07:0,39,1054	0/1:70,0:51:43.52:44,0,653	0/0:27,0:22:40.07:0,40,907	0/0:31,0:24:39.50:0,39,1038	0/0:15,0:13:21.07:0,21,513	0/0:35,0:32:27.22:0,27,1214	0/0:25,0:20:54.07:0,54,1144	0/0:33,0:32:48.01:0,48,1109	0/0:23,0:17:20.46:0,20,575	0/0:9,0:7:12.04:0,12,221	0/0:46,0:42:49.94:0,50,2038	0/1:28,0:13:57.62:58,0,203	0/1:23,12:18:42.78:467,0,43	1/1:19,0:14:5.99:58,6,0	0/1:68,51:91:66.31:90,0,66	0/0:26,0:24:28.46:0,28,942	0/0:12,0:11:23.06:0,23,562	0/0:39,0:35:11.08:0,11,1632	0/0:19,0:18:29.88:0,30,701	0/1:26,1:17:99:160,0,127	0/1:11,7:12:5.91:289,0,6	0/0:15,0:11:22.11:0,22,555
chr10	97274100	.	TG	T	385.21	PASS	AB=0.890;AC=6;AF=0.111;AN=54;BaseQRankSum=9.533;DP=1118;FS=1.152;HRun=2;HaplotypeScore=186.1747;InbreedingCoeff=0.1737;MQ=37.67;MQ0=164;MQRankSum=-3.324;QD=1.39;ReadPosRankSum=0.620;VQSLOD=-0.6889;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:22:14.65:0,15,351	0/0:11,0:8:18.03:0,18,245	./.	0/0:61,0:3:3.01:0,3,43	0/0:24,0:18:39.58:0,40,584	0/0:13,0:9:24.08:0,24,354	0/0:58,0:48:99:0,109,1683	0/0:92,0:49:75.45:0,75,1021	0/0:44,0:28:33.58:0,34,652	0/0:45,0:27:69.14:0,69,1015	0/0:13,0:10:30.10:0,30,460	0/0:51,0:38:75.76:0,76,1263	0/0:32,0:24:47.63:0,48,746	0/0:34,0:29:47.14:0,47,672	0/0:19,0:13:24.18:0,24,402	0/0:18,0:13:25.63:0,26,364	0/0:42,0:36:84.11:0,84,1251	0/0:31,0:22:18.05:0,18,260	0/1:37,1:15:1.33:1,0,95	1/1:17,8:20:4.76:109,5,0	0/1:144,18:121:99:269,0,185	0/0:38,0:32:62.75:0,63,929	0/0:22,0:18:46.71:0,47,722	0/0:77,1:68:99:0,123,2014	0/0:20,0:16:38.98:0,39,570	0/1:31,8:30:96.24:96,0,246	0/1:10,2:9:22.46:22,0,90	0/0:12,0:9:24.08:0,24,383
chr10	97274295	.	GT	G	734.12	PASS	AB=0.959;AC=9;AF=0.161;AN=56;BaseQRankSum=13.191;DP=1029;FS=2.157;HRun=2;HaplotypeScore=162.2490;InbreedingCoeff=0.0922;MQ=44.65;MQ0=67;MQRankSum=2.522;QD=2.10;ReadPosRankSum=3.660;VQSLOD=-0.1737;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:59,1:52:55.26:176,0,55	0/0:11,0:9:17.97:0,18,215	0/0:33,1:6:15.02:0,15,166	0/0:56,0:6:12.99:0,13,173	0/0:19,0:15:27.55:0,28,378	0/0:18,0:18:51.14:0,51,690	0/0:45,1:41:99:0,113,1477	0/0:61,3:42:45.38:0,45,1079	0/0:34,0:32:70.32:0,70,931	0/0:45,2:42:17.49:0,17,1256	0/0:15,0:13:25.59:0,26,337	0/0:37,1:30:52.89:0,53,650	0/0:27,1:26:53.34:0,53,838	0/0:26,0:24:51.88:0,52,755	0/0:24,0:19:54.16:0,54,758	0/0:20,0:15:42.01:0,42,590	0/0:52,2:53:99:0,104,1580	0/1:24,3:24:32.36:32,0,42	1/1:20,0:12:5.89:83,6,0	0/1:30,1:29:5.91:91,0,6	0/1:122,4:100:99:358,0,154	0/0:33,0:25:60.64:0,61,834	0/0:19,2:19:42.61:0,43,588	0/0:67,5:66:99:0,133,1891	0/1:18,1:17:2.02:2,0,410	0/1:45,2:37:64.16:116,0,64	0/1:19,0:17:8.99:9,0,77	0/0:18,0:15:31.87:0,32,484
chr10	97274296	.	T	TG	964.41	PASS	AB=0.969;AC=10;AF=0.179;AN=56;BaseQRankSum=13.073;DP=1025;FS=2.553;HRun=1;HaplotypeScore=164.6067;InbreedingCoeff=0.1998;MQ=45.00;MQ0=63;MQRankSum=2.218;QD=2.78;ReadPosRankSum=3.385;VQSLOD=0.1478;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:55,0:50:33.73:224,0,34	0/0:11,0:9:17.97:0,18,206	0/0:34,0:6:15.02:0,15,164	0/0:57,0:8:9.16:0,9,166	0/0:20,0:16:27.55:0,28,357	0/0:17,1:18:51.13:0,51,672	0/0:46,0:41:99:0,114,1453	0/0:64,0:42:65.95:0,66,1062	0/0:31,2:32:68.89:0,69,889	0/0:46,0:42:7.31:0,7,1177	0/0:15,0:14:27.88:0,28,350	0/0:37,0:31:53.39:0,53,652	0/0:27,1:26:53.33:0,53,799	0/0:26,0:24:53.13:0,53,722	0/0:23,0:19:54.16:0,54,724	0/0:19,0:15:42:0,42,555	0/0:52,1:53:95.50:0,95,1485	0/1:27,0:24:22.80:55,0,23	1/1:18,1:12:7.86:102,8,0	1/1:32,0:30:4.39:121,4,0	0/1:113,8:100:99:436,0,100	0/0:33,0:25:60.64:0,61,793	0/0:21,0:19:44.59:0,45,559	0/0:71,0:66:99:0,132,1789	0/1:19,0:18:2.02:2,0,397	0/1:44,0:35:74.33:145,0,74	0/1:19,0:17:20.69:21,0,68	0/0:16,1:15:38.47:0,38,481
chr10	97276224	.	CTGTGTGTGTGTG	C	6181.20	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.433;DP=609;FS=0.000;HRun=0;HaplotypeScore=198.7986;InbreedingCoeff=0.9785;MQ=57.96;MQ0=12;MQRankSum=-9.952;QD=38.16;ReadPosRankSum=1.984;VQSLOD=4.3915;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,16:29:36.12:1191,36,0	0/0:7,0:8:19.31:0,19,772	0/0:38,0:18:24.08:0,24,837	0/0:30,0:17:27.01:0,27,762	0/0:19,0:19:27.08:0,27,1374	0/0:10,0:16:21.07:0,21,1068	0/0:21,0:25:51.17:0,51,2616	0/0:30,0:30:45.15:0,45,2180	0/0:28,0:29:54.19:0,54,3049	0/0:19,0:18:33.11:0,33,1607	0/0:13,0:13:19.88:0,20,912	0/0:23,0:24:50.75:0,51,2911	0/0:9,0:9:18.06:0,18,982	0/0:24,0:26:60.21:0,60,3217	0/0:26,0:26:60.21:0,60,3202	0/0:18,0:20:48.16:0,48,2547	0/0:20,0:23:63.22:0,63,3130	1/1:9,6:12:12.04:423,12,0	1/1:16,6:20:17.78:553,18,0	1/1:8,9:17:18.06:625,18,0	1/1:16,11:27:11.77:411,12,0	0/0:17,0:17:27:0,27,1377	0/0:12,0:12:30.10:0,30,1739	0/0:24,0:24:48.16:0,48,2607	0/0:14,0:20:18.06:0,18,836	1/1:12,15:27:45.14:1530,45,0	1/1:5,19:24:42.14:1447,42,0	0/0:13,0:15:39.13:0,39,1837
chr10	97276350	.	CT	C	2104.89	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.448;DP=457;FS=23.365;HRun=1;HaplotypeScore=60.7167;InbreedingCoeff=0.9383;MQ=82.38;MQ0=0;MQRankSum=-2.949;QD=21.26;ReadPosRankSum=-1.610;VQSLOD=2.1030;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,3:11:7.63:128,8,0	0/0:6,0:6:15:0,15,187	0/0:23,3:25:33.85:0,34,486	0/0:19,0:19:2.86:0,3,398	0/0:13,0:13:39.10:0,39,507	0/0:18,0:18:43.52:0,44,599	0/0:16,0:16:45.09:0,45,603	0/0:16,0:16:34.35:0,34,451	0/0:11,0:11:30.07:0,30,382	0/0:12,0:12:32.76:0,33,405	0/0:20,0:20:54.12:0,54,667	0/0:19,0:19:44.71:0,45,550	0/0:8,0:8:24.03:0,24,281	0/0:23,0:23:63.12:0,63,799	0/0:21,0:21:63.20:0,63,861	0/0:9,0:9:23.97:0,24,229	0/0:24,0:24:66.20:0,66,901	1/1:0,9:9:21.07:290,21,0	1/1:6,7:13:22.09:384,22,0	1/1:1,18:19:35.75:363,36,0	1/1:0,20:20:27.56:370,28,0	0/0:23,0:23:66.14:0,66,849	0/0:20,0:20:60.13:0,60,765	0/0:28,0:28:84.21:0,84,1112	0/0:23,0:23:69.12:0,69,833	1/1:0,15:15:35.98:402,36,0	1/1:2,10:12:29.65:362,30,0	0/0:3,0:3:9.03:0,9,125
chr10	97276449	.	TACACACAC	T	1012.75	PASS	AB=0.914;AC=14;AF=0.280;AN=50;BaseQRankSum=2.771;DP=442;FS=0.000;HRun=0;HaplotypeScore=110.5955;InbreedingCoeff=0.3919;MQ=78.99;MQ0=24;MQRankSum=0.866;QD=8.17;ReadPosRankSum=0.371;VQSLOD=2.1263;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:22:40.25:40,0,190	1/1:7,0:7:3.01:74,3,0	./.	./.	0/0:21,0:20:24:0,24,320	0/0:14,0:13:21.05:0,21,367	0/1:20,0:17:23.17:23,0,173	0/0:12,0:11:5.97:0,6,57	1/1:10,0:10:7.05:58,7,0	0/0:14,0:12:5.26:0,5,161	0/0:11,0:11:6.02:0,6,146	0/0:12,0:12:9.92:0,10,150	0/0:8,0:8:18.06:0,18,436	0/0:17,0:16:15.50:0,16,337	0/0:17,0:17:15.03:0,15,312	0/0:20,0:16:13.81:0,14,92	0/0:24,0:24:25.54:0,26,795	0/1:6,0:6:35.30:83,0,35	1/1:5,3:9:12.04:285,12,0	./.	1/1:13,0:11:14.57:362,15,0	0/0:16,0:16:6:0,6,106	0/0:12,0:12:15.05:0,15,349	0/0:24,0:22:24.08:0,24,585	0/0:7,0:7:3.01:0,3,99	0/1:10,2:12:94.53:137,0,95	1/1:11,9:18:5.95:109,6,0	0/0:4,0:4:9.03:0,9,144
chr10	97276499	.	CAGAG	C	101.26	PASS	AB=0.972;AC=12;AF=0.231;AN=52;BaseQRankSum=-1.595;DP=458;FS=0.000;HRun=0;HaplotypeScore=96.1584;InbreedingCoeff=0.3501;MQ=42.03;MQ0=53;MQRankSum=1.473;QD=0.80;ReadPosRankSum=0.067;VQSLOD=1.1637;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:20:2.72:0,3,87	0/0:7,0:7:12.04:0,12,183	./.	./.	0/0:17,0:14:9:0,9,146	0/0:22,0:20:11.97:0,12,196	0/1:22,0:18:33.61:36,0,34	0/0:15,0:15:8.96:0,9,93	0/0:13,0:13:12.51:0,13,191	1/1:18,0:15:2.98:46,3,0	1/1:8,6:13:3:30,3,0	0/0:19,0:17:9.97:0,10,153	0/0:12,0:11:15.05:0,15,199	0/0:15,0:15:24.08:0,24,379	0/0:19,0:19:18.04:0,18,296	0/0:15,0:10:3.01:0,3,50	0/0:35,0:31:30.91:0,31,413	0/0:23,0:13:10.39:0,10,145	1/1:14,0:12:3.01:43,3,0	0/0:13,0:10:6.28:0,6,64	1/1:23,0:17:2.63:44,3,0	0/0:15,0:14:3.18:0,3,92	0/0:14,0:14:6.02:0,6,98	0/0:34,0:27:7.27:0,7,99	0/1:16,0:15:28.33:28,0,35	0/0:12,0:10:18.06:0,18,274	1/1:18,0:17:1.04:4,1,0	0/0:3,0:3:6:0,6,57
chr10	97278616	.	TTGTG	T	567.38	PASS	AB=0.883;AC=12;AF=0.231;AN=52;BaseQRankSum=4.273;DP=552;FS=4.943;HRun=0;HaplotypeScore=96.5080;InbreedingCoeff=0.3716;MQ=66.10;MQ0=11;MQRankSum=-1.170;QD=3.66;ReadPosRankSum=-0.045;VQSLOD=1.4640;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:14.70:0,15,313	0/0:8,0:8:3.01:0,3,71	./.	./.	0/0:22,0:22:20.78:0,21,360	0/1:22,0:23:19.55:20,0,350	0/0:24,0:24:21.07:0,21,455	0/0:26,0:23:6.02:0,6,121	0/0:24,0:24:42.14:0,42,833	0/0:15,0:15:3.01:0,3,71	0/0:16,0:15:15.05:0,15,291	0/0:10,0:11:11.77:0,12,189	0/0:16,0:16:18.05:0,18,342	0/0:19,0:19:24.08:0,24,463	0/1:15,2:18:60.72:61,0,455	0/0:21,0:21:12.04:0,12,247	0/0:34,0:36:41.88:0,42,863	0/1:13,1:15:19.77:20,0,417	0/1:16,3:18:58.65:80,0,59	1/1:10,5:16:12:168,12,0	1/1:24,4:28:3.01:47,3,0	0/0:17,0:16:17.91:0,18,285	0/0:16,0:16:20.66:0,21,331	0/0:21,0:24:20.64:0,21,436	0/0:16,0:16:9.03:0,9,172	1/1:14,0:14:3.01:45,3,0	1/1:12,9:21:18.04:279,18,0	0/0:10,0:10:21.05:0,21,380
chr10	97279499	.	T	TTTTG	3689.98	PASS	AB=0.550;AC=11;AF=0.196;AN=56;BaseQRankSum=-5.344;DP=526;FS=11.265;HRun=0;HaplotypeScore=83.1111;InbreedingCoeff=0.8410;MQ=50.11;MQ0=24;MQRankSum=-0.985;QD=31.27;ReadPosRankSum=3.485;VQSLOD=2.4360;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:32:53.67:895,54,0	0/0:7,0:7:16.34:0,16,187	0/0:25,0:5:9.40:0,9,89	0/0:16,0:1:0:0,0,0	0/0:17,0:16:45.05:0,45,710	0/0:17,0:15:37.59:0,38,490	0/0:14,0:10:23.96:0,24,317	0/0:27,0:23:59.37:0,59,897	0/0:23,0:22:55.01:0,55,655	0/0:27,0:24:70.88:0,71,853	0/0:12,0:11:24.06:0,24,403	0/0:16,0:16:33.01:0,33,449	0/0:13,0:12:27:0,27,366	0/0:14,0:13:32.79:0,33,358	0/0:11,0:10:24.08:0,24,441	0/0:11,0:10:24.03:0,24,378	0/0:30,0:27:69.19:0,69,1128	0/0:31,0:29:46.56:0,47,399	1/1:1,18:19:50.36:797,50,0	1/1:2,15:17:30.03:565,30,0	0/1:2,9:10:40.10:267,0,40	0/0:16,0:15:35.92:0,36,488	0/0:25,0:20:57.05:0,57,835	0/0:24,0:20:37.20:0,37,532	0/0:16,0:14:33.04:0,33,527	1/1:2,17:18:42.12:777,42,0	1/1:1,15:17:18.06:388,18,0	0/0:16,0:15:24.87:0,25,292
chr10	97281457	.	CTATGTATG	C	582.41	PASS	AB=0.975;AC=14;AF=0.280;AN=50;BaseQRankSum=2.277;DP=759;FS=5.623;HRun=0;HaplotypeScore=143.7878;InbreedingCoeff=0.2713;MQ=42.54;MQ0=84;MQRankSum=-1.862;QD=2.32;ReadPosRankSum=-3.205;VQSLOD=1.1509;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:30:15.03:0,15,214	0/1:8,0:8:23.66:24,0,89	./.	./.	0/0:35,0:27:6.01:0,6,74	0/0:19,0:16:15.05:0,15,248	./.	1/1:33,7:21:44.67:361,45,0	0/0:38,0:33:21.06:0,21,309	0/1:44,0:30:29.87:30,0,71	0/0:17,0:12:2.99:0,3,24	0/0:30,0:27:33.01:0,33,452	0/0:20,0:17:15.05:0,15,245	0/0:22,0:18:2.35:0,2,20	0/0:21,0:19:15.02:0,15,192	0/0:20,0:16:12.04:0,12,181	0/0:28,0:23:5.02:0,5,43	0/0:29,0:15:6.77:0,7,41	1/1:12,0:7:0.83:2,1,0	1/1:29,0:28:6.88:45,7,0	1/1:23,0:16:0.47:1,0,0	0/0:25,0:21:12:0,12,170	0/0:41,0:37:30.52:0,31,410	0/0:37,0:25:9.01:0,9,120	1/1:25,0:23:1.69:4,2,0	0/1:39,0:35:36.61:49,0,37	0/0:32,0:29:0.64:0,1,6	0/1:30,0:19:99:202,0,154
chr10	97281521	.	CT	C	454.59	PASS	AB=0.823;AC=5;AF=0.096;AN=52;BaseQRankSum=4.296;DP=868;FS=0.000;HRun=1;HaplotypeScore=109.3699;InbreedingCoeff=0.0481;MQ=32.49;MQ0=165;MQRankSum=-4.803;QD=3.34;ReadPosRankSum=0.920;VQSLOD=-0.0732;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:75,5:37:18.26:0,18,276	0/0:12,0:8:9:0,9,111	./.	./.	0/0:42,0:30:14.95:0,15,135	0/0:20,0:17:22.76:0,23,330	1/1:28,0:7:0.57:2,1,0	0/0:30,0:13:38.22:0,38,494	0/0:31,0:18:14.74:0,15,136	0/0:37,0:21:60.19:0,60,890	0/0:23,0:15:21.02:0,21,254	0/0:23,0:19:23.51:0,24,395	0/0:27,0:20:10.65:0,11,178	0/0:27,0:20:27.04:0,27,343	0/0:28,0:17:9:0,9,110	0/0:25,0:14:11.98:0,12,132	0/0:48,0:28:11.87:0,12,192	0/0:39,0:22:22.75:0,23,462	0/1:13,4:15:99:129,0,314	0/0:26,7:30:12.17:0,12,165	0/0:31,0:15:12.04:0,12,177	0/0:21,0:13:9.02:0,9,120	0/0:30,0:21:9.03:0,9,132	0/0:44,0:22:2.17:0,2,43	0/0:25,0:20:21.03:0,21,272	0/1:34,12:37:99:364,0,732	0/1:38,7:36:59.09:59,0,301	0/0:56,0:38:31.12:0,31,504
chr10	97281898	.	C	CG	8063.35	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-14.853;DP=662;FS=2.675;HRun=2;HaplotypeScore=58.2452;InbreedingCoeff=0.9999;MQ=86.38;MQ0=0;MQRankSum=-5.658;QD=38.77;ReadPosRankSum=2.845;VQSLOD=5.5311;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,48:49:99:1938,135,0	0/0:13,0:13:39.12:0,39,482	0/0:20,0:20:54.14:0,54,638	0/0:23,0:23:57.14:0,57,672	0/0:26,0:26:72.23:0,72,892	0/0:21,0:21:63.20:0,63,781	0/0:23,0:23:69.18:0,69,827	0/0:20,0:20:57.12:0,57,666	0/0:18,0:18:48.15:0,48,594	0/0:27,0:27:75.21:0,75,907	0/0:14,0:14:33.10:0,33,409	0/0:25,0:25:72.23:0,72,892	0/0:18,0:18:51.16:0,51,632	0/0:20,0:20:57.18:0,57,706	0/0:27,0:27:72.23:0,72,892	0/0:17,0:17:48.15:0,48,595	0/0:35,0:35:99:0,105,1288	1/1:1,21:22:60.20:864,60,0	1/1:1,23:24:69.17:949,69,0	1/1:0,19:19:54.18:777,54,0	1/1:3,34:37:90.30:1295,90,0	0/0:13,0:13:36.11:0,36,446	0/0:32,0:32:90.27:0,90,1102	0/0:28,0:27:78.20:0,78,949	0/0:14,0:14:36.11:0,36,446	1/1:1,25:26:75.20:1054,75,0	1/1:2,29:30:84.26:1186,84,0	0/0:20,0:20:54.17:0,54,669
chr10	97282418	.	CGT	C	6710.87	PASS	AB=0.908;AC=16;AF=0.286;AN=56;BaseQRankSum=13.571;DP=1110;FS=2.062;HRun=0;HaplotypeScore=143.4898;InbreedingCoeff=0.8180;MQ=58.39;MQ0=8;MQRankSum=0.878;QD=17.75;ReadPosRankSum=2.895;VQSLOD=4.6602;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,47:62:99:1310,111,0	0/0:16,1:17:11.50:0,11,687	0/0:50,0:24:39.15:0,39,498	0/0:44,0:31:33.49:0,33,501	0/0:33,1:34:35.55:0,36,1028	0/0:25,0:25:57.26:0,57,932	0/0:38,0:38:63.69:0,64,1348	0/0:45,0:45:87.25:0,87,1326	0/0:47,2:50:13.50:0,13,1595	0/0:47,0:47:99:0,102,1532	0/0:26,0:26:25.34:0,25,819	0/0:43,0:43:83:0,83,1733	0/0:33,1:34:47.63:0,48,1266	0/0:33,1:34:50.61:0,51,1250	0/0:57,2:58:99:0,123,2362	0/1:41,4:45:14.53:15,0,1239	0/0:56,0:56:99:0,138,2134	1/1:9,35:44:52.25:856,52,0	1/1:10,16:24:31.51:444,32,0	1/1:7,19:26:48.04:538,48,0	1/1:36,45:81:99:2148,181,0	0/1:31,4:35:31.93:32,0,942	0/0:31,0:31:60.19:0,60,945	0/0:54,1:56:34.85:0,35,1962	0/0:26,0:26:56.78:0,57,904	1/1:6,26:33:81.03:918,81,0	1/1:2,22:25:21.96:451,22,0	0/0:17,0:17:39.10:0,39,573
chr10	97282740	.	A	ATGTG	10908.42	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-10.078;DP=1201;FS=0.633;HRun=0;HaplotypeScore=203.9324;InbreedingCoeff=0.9371;MQ=57.63;MQ0=4;MQRankSum=-1.254;QD=26.87;ReadPosRankSum=-0.860;VQSLOD=4.6013;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:45,0:54:61.78:749,62,0	0/0:14,0:16:48.07:0,48,711	0/1:51,0:38:2.92:3,0,360	0/0:57,0:36:22.54:0,23,593	0/0:28,0:29:66.22:0,66,1067	0/0:30,0:30:69.23:0,69,1140	0/0:39,0:39:87.29:0,87,1426	0/0:42,0:44:54.17:0,54,834	0/0:46,0:47:99:0,108,1724	0/0:48,0:49:99:0,108,1739	0/0:19,0:19:33.03:0,33,512	0/0:43,0:43:99:0,105,1701	0/0:50,0:51:99:0,126,2056	0/0:42,0:43:99:0,105,1682	0/0:52,0:53:99:0,138,2196	0/0:49,0:52:99:0,105,1654	0/0:47,0:48:99:0,120,1910	1/1:6,16:22:33.11:811,33,0	1/1:18,18:39:19.09:1165,19,0	1/1:15,16:33:35.59:704,36,0	1/1:29,85:117:92.95:3812,93,0	0/0:36,0:36:78.23:0,78,1210	0/0:32,0:32:81.27:0,81,1306	0/0:52,0:52:99:0,120,1908	0/0:35,0:35:84.29:0,84,1393	1/1:23,31:56:54.14:2182,54,0	1/1:4,25:29:63.17:1482,63,0	0/0:18,0:19:44.47:0,44,832
chr10	97283218	.	T	TTCC	450.81	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=3.772;DP=491;FS=14.320;HRun=0;HaplotypeScore=101.9511;InbreedingCoeff=0.0278;MQ=80.26;MQ0=5;MQRankSum=1.629;QD=1.96;ReadPosRankSum=-0.781;VQSLOD=1.1363;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:6.47:52,6,0	0/0:10,0:10:8.90:0,9,64	0/0:25,0:16:2.74:0,3,12	0/1:25,0:24:9.76:10,0,11	1/1:7,0:7:0.47:1,0,0	0/0:22,0:22:19.92:0,20,159	0/0:18,0:18:17.90:0,18,131	1/1:22,0:22:3.43:20,3,0	0/0:23,0:23:2.95:0,3,19	0/1:23,0:23:44.34:44,0,56	0/0:15,0:15:2.58:0,3,40	0/0:19,0:18:14.69:0,15,112	0/0:16,0:16:17.83:0,18,143	0/0:13,0:13:8.42:0,8,53	0/1:16,0:16:7.14:7,0,67	0/0:20,0:20:7.53:0,8,122	0/1:19,0:19:54.31:54,0,110	1/1:10,4:14:21.04:338,21,0	0/1:13,0:13:1.46:1,0,14	0/1:18,0:18:16.74:17,0,18	0/0:31,0:31:9.66:0,10,166	0/0:15,0:15:2.85:0,3,17	0/1:12,0:12:9.50:10,0,19	0/1:26,0:25:5.73:6,0,22	0/0:20,0:20:12.79:0,13,110	0/0:14,0:14:2.10:0,2,153	0/1:9,0:9:7.56:8,0,53	0/1:6,0:6:13.95:32,0,14
chr10	97283335	.	T	TCTC	3687.44	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=2.868;DP=402;FS=8.670;HRun=0;HaplotypeScore=96.3817;InbreedingCoeff=0.9223;MQ=55.66;MQ0=14;MQRankSum=-6.419;QD=30.73;ReadPosRankSum=0.938;VQSLOD=3.8386;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,12:23:21.99:655,22,0	0/0:4,0:5:8.26:0,8,129	0/0:16,0:7:14.15:0,14,151	0/0:22,0:14:29.86:0,30,354	0/0:4,0:4:9.03:0,9,132	0/0:10,0:10:30.10:0,30,448	0/0:22,0:22:2.09:0,2,495	0/0:21,0:21:29.01:0,29,429	0/0:11,0:10:17.99:0,18,227	0/0:18,0:17:39.10:0,39,560	0/0:11,0:11:30:0,30,398	0/0:7,0:7:15.05:0,15,213	0/0:9,0:9:24.07:0,24,336	0/0:7,0:7:18.05:0,18,260	0/0:11,0:12:27.88:0,28,440	0/0:15,0:16:41.84:0,42,561	0/0:16,0:16:26.91:0,27,454	1/1:5,3:8:11.25:163,11,0	1/1:15,1:9:21.06:328,21,0	1/1:8,8:15:27.80:538,28,0	1/1:16,14:28:24.33:679,24,0	0/0:13,0:13:26.96:0,27,350	0/0:15,0:15:45.06:0,45,595	0/0:20,0:18:41.24:0,41,506	0/0:14,0:15:38.35:0,38,540	1/1:4,12:15:39.13:769,39,0	1/1:2,8:9:30.08:556,30,0	0/0:7,0:6:18.06:0,18,269
chr10	97283367	.	TCTC	T	251.66	PASS	AB=0.786;AC=2;AF=0.036;AN=56;BaseQRankSum=2.447;DP=561;FS=1.087;HRun=0;HaplotypeScore=131.6839;InbreedingCoeff=0.3137;MQ=61.44;MQ0=8;MQRankSum=2.042;QD=4.42;ReadPosRankSum=1.175;VQSLOD=2.5673;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:31.45:0,31,273	0/0:6,0:6:12.04:0,12,220	0/1:33,0:16:21.32:21,0,312	0/0:33,0:24:15.18:0,15,459	0/0:17,0:17:48.16:0,48,961	0/0:15,0:15:27.09:0,27,551	0/1:6,18:24:0.94:318,0,1	0/0:23,0:22:30.02:0,30,417	0/0:22,0:22:59.93:0,60,1020	0/0:21,0:21:39.13:0,39,773	0/0:16,0:16:30.10:0,30,563	0/0:13,0:13:38.99:0,39,532	0/0:16,0:16:45.15:0,45,876	0/0:12,0:12:35.78:0,36,648	0/0:19,0:19:48.11:0,48,926	0/0:25,0:25:57.12:0,57,1011	0/0:17,0:18:47.99:0,48,939	0/0:9,0:9:19.23:0,19,209	0/0:20,0:19:30.04:0,30,345	0/0:22,0:21:44.85:0,45,463	0/0:27,0:26:25.47:0,25,201	0/0:18,0:18:23.82:0,24,467	0/0:20,0:18:45.12:0,45,780	0/0:33,0:32:63.23:0,63,1446	0/0:20,0:20:39.09:0,39,710	0/0:27,0:26:65.91:0,66,714	0/0:20,0:19:33.06:0,33,398	0/0:7,0:7:15.05:0,15,283
chr10	97283374	.	C	CTCCTCT	7185.30	PASS	AB=0.926;AC=13;AF=0.232;AN=56;BaseQRankSum=1.799;DP=589;FS=24.155;HRun=0;HaplotypeScore=156.9403;InbreedingCoeff=0.8866;MQ=58.87;MQ0=8;MQRankSum=-10.668;QD=45.19;ReadPosRankSum=-1.465;VQSLOD=2.8527;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:25,3:27:44.48:930,44,0	0/0:6,0:6:12.02:0,12,249	0/0:36,0:16:27.55:0,28,398	0/0:31,0:23:30.22:0,30,594	0/0:19,0:19:48.16:0,48,1091	0/0:16,0:16:41.89:0,42,723	0/0:24,0:24:35.82:0,36,443	0/0:18,0:17:38.98:0,39,513	0/0:25,0:25:59.14:0,59,1205	0/0:23,0:23:51.11:0,51,963	0/0:16,0:16:33.09:0,33,618	0/0:15,0:15:11.93:0,12,527	0/0:16,0:16:48.13:0,48,984	0/0:13,0:13:20.12:0,20,720	0/0:20,0:20:36.15:0,36,1066	0/0:25,0:25:62.72:0,63,1157	0/0:20,0:20:36.71:0,37,1042	1/1:7,2:9:23.62:482,24,0	1/1:15,6:20:44.56:946,45,0	1/1:16,7:23:63.10:1276,63,0	0/1:23,2:24:25.41:614,0,25	0/0:17,0:17:30.03:0,30,563	0/0:21,0:19:51.10:0,51,892	0/0:41,0:39:93.12:0,93,1759	0/0:19,0:19:38.79:0,39,835	1/1:6,21:32:75.94:1940,76,0	1/1:5,16:20:32.47:998,32,0	0/0:9,0:9:24.04:0,24,392
chr10	97285700	.	TA	T	5020.22	PASS	AB=0.989;AC=41;AF=0.732;AN=56;BaseQRankSum=-4.617;DP=648;FS=2.818;HRun=1;HaplotypeScore=176.1345;InbreedingCoeff=-0.4104;MQ=61.16;MQ0=0;MQRankSum=-5.826;QD=7.75;ReadPosRankSum=13.260;VQSLOD=-0.0626;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:41:35.81:339,0,36	1/1:11,0:11:1:95,1,0	0/1:21,1:21:25.69:26,0,346	0/1:20,3:23:78.37:78,0,360	0/1:26,0:26:48.61:172,0,49	1/1:27,0:27:36.89:260,37,0	0/1:23,0:23:36.21:163,0,36	1/1:24,0:24:50.17:191,50,0	1/1:32,0:31:8.17:295,8,0	0/1:34,0:34:13.01:248,0,13	0/1:30,0:30:48.29:233,0,48	1/1:17,0:17:30.63:207,31,0	0/1:18,0:18:0.89:167,0,1	0/1:11,0:11:34.33:89,0,34	1/1:18,0:18:0.51:174,1,0	1/1:18,0:18:6.81:138,7,0	0/1:20,0:20:42.75:144,0,43	1/1:18,0:18:41.17:190,41,0	1/1:24,0:24:16.76:159,17,0	0/1:32,0:32:30.22:239,0,30	1/1:22,0:22:2.18:161,2,0	1/1:22,0:22:7.12:229,7,0	0/1:29,0:29:64.68:215,0,65	0/1:19,0:19:32.42:99,0,32	1/1:18,0:18:27.69:179,28,0	0/1:29,0:28:36.34:180,0,36	0/1:33,0:32:37.98:279,0,38	1/1:7,0:7:16.04:70,16,0
chr10	97286832	.	G	GA	763.77	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.260;DP=732;FS=2.901;HRun=2;HaplotypeScore=68.5554;InbreedingCoeff=0.9842;MQ=97.31;MQ0=1;MQRankSum=-4.495;QD=31.82;ReadPosRankSum=1.209;VQSLOD=3.5246;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.27:0,96,1161	0/0:5,0:5:15.05:0,15,185	0/0:43,0:43:99:0,114,1409	0/0:30,0:30:80.58:0,81,916	0/0:24,0:24:69.22:0,69,853	0/0:19,0:19:57.16:0,57,681	0/0:20,0:20:57.15:0,57,679	0/0:28,0:28:75.22:0,75,908	0/0:35,0:35:99:0,102,1224	0/0:33,0:33:87.26:0,87,1064	0/0:11,0:11:33.10:0,33,409	0/0:22,0:22:60.17:0,60,730	0/0:33,0:33:96.30:0,96,1188	0/0:23,0:23:66.21:0,66,817	0/0:35,0:35:99:0,102,1263	0/0:24,0:24:72.18:0,72,843	0/0:35,0:35:96.27:0,96,1162	1/1:1,23:24:60.20:859,60,0	0/0:25,0:25:75.22:0,75,907	0/0:20,0:20:57.18:0,57,705	0/0:39,0:38:99:0,108,1285	0/0:16,0:16:45.14:0,45,552	0/0:27,0:27:75.20:0,75,901	0/0:30,0:30:87.21:0,87,1034	0/0:25,0:25:69.20:0,69,833	0/0:26,0:27:78.23:0,78,955	0/0:27,0:27:75.22:0,75,915	0/0:17,0:17:51.16:0,51,631
chr10	97287657	.	TCA	T	106.41	PASS	AB=0.914;AC=7;AF=0.146;AN=48;BaseQRankSum=3.193;DP=423;FS=6.201;HRun=0;HaplotypeScore=51.6880;InbreedingCoeff=-0.0652;MQ=60.02;MQ0=30;MQRankSum=0.059;QD=1.10;ReadPosRankSum=0.497;VQSLOD=0.6112;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:20:0.87:0,1,120	0/0:3,0:3:3.01:0,3,44	./.	./.	0/1:13,1:14:20.47:20,0,118	0/1:7,1:8:37.26:37,0,111	0/1:21,0:20:14.48:14,0,180	0/0:16,0:12:5.99:0,6,59	./.	0/0:11,0:10:9.02:0,9,116	0/0:7,0:7:9.03:0,9,123	0/1:20,2:22:34.98:35,0,269	0/0:15,0:15:15.05:0,15,214	0/0:11,0:10:9.03:0,9,124	0/0:9,0:9:15.05:0,15,208	0/0:17,0:15:12.04:0,12,178	0/0:25,2:26:0.56:0,1,363	1/1:12,0:17:14.20:70,14,0	0/0:7,0:4:2.98:0,3,21	0/0:11,0:11:2.88:0,3,22	0/0:37,0:33:3:0,3,27	0/0:8,0:8:3.01:0,3,45	0/0:7,2:7:2.99:0,3,24	0/1:12,3:15:50.02:50,0,92	./.	0/0:12,0:10:14.95:0,15,144	0/0:8,0:7:3.45:0,3,22	0/0:7,0:8:9.01:0,9,94
chr10	97290016	.	C	CT	3154.75	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=6.085;DP=677;FS=1.273;HRun=8;HaplotypeScore=75.8255;InbreedingCoeff=0.9024;MQ=72.44;MQ0=1;MQRankSum=-0.971;QD=21.91;ReadPosRankSum=-0.525;VQSLOD=3.8506;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,2:34:58.41:0,58,783	0/0:15,0:15:39.02:0,39,357	0/1:24,0:16:6.63:7,0,197	0/0:29,0:19:15.10:0,15,198	0/0:18,0:18:48.02:0,48,439	0/0:19,0:19:48.02:0,48,439	0/0:16,0:16:42.02:0,42,384	0/0:32,0:32:59.98:0,60,543	0/0:21,0:21:57.03:0,57,521	0/0:26,0:26:66.02:0,66,604	0/0:18,0:18:51.02:0,51,467	0/0:18,0:18:42.01:0,42,384	0/0:21,0:21:57.03:0,57,521	0/0:26,0:26:75.03:0,75,686	0/0:37,0:37:99:0,105,960	0/0:25,0:25:60.03:0,60,549	0/0:29,0:29:72:0,72,648	0/0:36,0:36:99:0,107,967	1/1:6,23:29:72.18:805,72,0	1/1:5,21:26:63.19:725,63,0	1/1:2,13:15:27.08:311,27,0	0/0:12,0:12:33.02:0,33,302	0/0:27,0:27:75.03:0,75,686	0/0:36,0:36:93:0,93,843	0/0:23,0:23:69.04:0,69,631	1/1:2,26:28:53.75:862,54,0	1/1:4,17:22:56.96:623,57,0	0/0:15,0:15:42:0,42,378
chr10	97291917	.	GCAGACAGA	G	3960.87	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.955;DP=808;FS=0.000;HRun=0;HaplotypeScore=206.4667;InbreedingCoeff=0.9590;MQ=70.58;MQ0=6;MQRankSum=-7.472;QD=30.01;ReadPosRankSum=1.287;VQSLOD=3.2720;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:50:89.89:0,90,757	0/0:10,0:10:18.05:0,18,634	0/0:31,0:20:14.91:0,15,359	0/0:33,0:30:25.60:0,26,659	0/0:19,0:19:33.11:0,33,1298	0/0:23,0:23:51.18:0,51,2046	0/0:33,0:33:78.19:0,78,2868	0/0:32,0:32:54.16:0,54,1752	0/0:36,0:36:75.24:0,75,2776	0/0:31,0:31:57.20:0,57,2149	0/0:21,0:21:48.14:0,48,1710	0/0:31,0:31:60.19:0,60,2258	0/0:28,0:29:69.22:0,69,2714	0/0:29,0:29:60.21:0,60,2415	0/0:28,0:29:69.21:0,69,2567	0/0:37,0:37:78.26:0,78,3029	0/0:38,0:40:78.23:0,78,2904	0/0:33,0:33:87.28:0,87,3424	1/1:10,7:17:15:248,15,0	1/1:5,11:16:11.55:250,12,0	1/1:21,9:30:6.49:154,6,0	0/0:17,0:19:39.11:0,39,1347	0/0:17,0:17:30.07:0,30,946	0/0:58,0:58:99:0,144,5567	0/0:22,0:22:48.16:0,48,1876	1/1:11,22:34:69.02:1649,69,0	1/1:10,25:35:66.23:1660,66,0	0/0:12,0:12:36.12:0,36,1316
chr10	97293410	.	A	AATTTTTCAGCG	4501.86	PASS	AB=0.931;AC=8;AF=0.143;AN=56;BaseQRankSum=10.185;DP=614;FS=48.470;HRun=0;HaplotypeScore=224.8727;InbreedingCoeff=0.1312;MQ=79.27;MQ0=0;MQRankSum=-9.373;QD=38.48;ReadPosRankSum=2.117;VQSLOD=2.3189;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,3:23:99:882,0,162	0/0:13,0:13:39.11:0,39,1308	0/0:14,0:14:38.79:0,39,536	0/0:20,0:20:28.37:0,28,865	0/0:25,0:25:69.15:0,69,2061	0/0:14,0:14:42.11:0,42,1362	0/0:34,0:34:99:0,102,2726	0/0:24,0:24:72.17:0,72,2027	0/0:24,0:24:72.18:0,72,2115	0/0:31,0:31:93.26:0,93,2698	0/0:21,0:21:63.14:0,63,1838	0/0:26,0:26:75.18:0,75,2193	0/0:28,0:28:84.26:0,84,2896	0/0:17,0:17:48.04:0,48,1235	0/0:24,0:24:72.17:0,72,2129	0/0:33,0:33:99:0,99,3470	0/0:26,0:26:75.18:0,75,2403	0/1:8,0:8:8.70:9,0,226	0/1:21,1:22:99:534,0,390	1/1:14,2:16:41.12:883,41,0	0/1:8,0:8:35.49:35,0,177	0/0:34,0:34:99:0,102,3196	0/0:13,0:13:39.11:0,39,1100	0/0:40,0:40:99:0,117,3761	0/0:28,0:28:84.26:0,84,2945	0/1:25,2:27:99:1441,0,280	0/1:10,3:13:99:717,0,251	0/0:8,0:8:24.03:0,24,733
chr10	97293695	.	G	GTCA	2964.63	PASS	AC=4;AF=0.091;AN=44;BaseQRankSum=-9.778;DP=564;FS=2.642;HRun=0;HaplotypeScore=98.3683;InbreedingCoeff=0.9131;MQ=88.23;MQ0=0;MQRankSum=-3.692;QD=47.82;ReadPosRankSum=0.833;VQSLOD=5.5584;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:22,0:22:63.20:0,63,974	0/0:23,0:23:56.37:0,56,825	0/0:21,0:22:21.91:0,22,617	0/0:21,0:21:54.18:0,54,856	1/1:4,17:22:45.15:984,45,0	0/0:36,0:36:93.30:0,93,1448	0/0:28,0:28:72.23:0,72,1096	0/0:30,0:30:84.20:0,84,1265	0/0:32,0:32:78.27:0,78,1236	0/0:24,0:24:69.24:0,69,1094	0/0:30,0:30:84.27:0,84,1308	0/0:27,0:27:81.26:0,81,1250	0/0:32,0:32:90.31:0,90,1424	1/1:5,34:40:96.33:2098,96,0	0/0:32,0:31:84.29:0,84,1330	0/0:37,0:37:99:0,108,1668	./.	./.	./.	./.	0/0:26,0:26:75.26:0,75,1190	0/0:15,0:15:39.13:0,39,618	0/0:21,0:21:57.18:0,57,878	0/0:30,0:30:87.30:0,87,1380	0/0:1,0:1:3.01:0,3,48	./.	0/0:13,0:13:39.13:0,39,618
chr10	97293726	.	G	GA	62.55	PASS	AB=0.625;AC=5;AF=0.104;AN=48;BaseQRankSum=3.717;DP=584;FS=14.976;HRun=0;HaplotypeScore=74.9915;InbreedingCoeff=0.6194;MQ=92.84;MQ0=0;MQRankSum=-3.465;QD=3.91;ReadPosRankSum=-3.371;VQSLOD=1.3251;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,4:5:5.87:52,6,0	0/0:20,0:20:60.20:0,60,839	0/0:26,0:26:72.22:0,72,974	0/0:24,0:24:59.90:0,60,797	0/0:20,0:20:57.16:0,57,777	0/0:24,0:24:63.21:0,63,878	0/0:36,0:36:99:0,108,1474	0/0:28,0:28:84.26:0,84,1142	0/0:31,0:31:90.30:0,90,1258	0/0:36,0:36:99:0,99,1384	0/0:22,0:22:63.21:0,63,876	0/0:34,0:34:99:0,99,1384	0/0:33,0:33:96.32:0,96,1341	0/0:29,0:29:87.25:0,87,1185	0/0:40,0:40:99:0,108,1509	0/0:30,0:29:90.26:0,90,1237	0/0:33,0:33:96.27:0,96,1303	./.	./.	./.	1/1:1,5:6:3:27,3,0	0/0:23,0:23:69.23:0,69,957	0/0:13,0:13:39.13:0,39,539	0/0:28,0:28:81.27:0,81,1133	0/0:26,0:26:69.21:0,69,946	0/1:2,3:5:30.05:90,0,30	./.	0/0:9,0:9:27.09:0,27,378
chr10	97294038	.	T	TC	9794.30	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=4.601;DP=850;FS=5.158;HRun=1;HaplotypeScore=88.8448;InbreedingCoeff=0.9999;MQ=85.63;MQ0=0;MQRankSum=-4.049;QD=39.81;ReadPosRankSum=0.008;VQSLOD=5.1216;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,60:60:99:2563,172,0	0/0:23,0:23:66.20:0,66,840	0/0:29,1:30:39.30:0,39,974	0/0:23,0:23:60.15:0,60,745	0/0:16,0:16:45.15:0,45,584	0/0:26,0:26:78.25:0,78,1013	0/0:31,0:31:93.30:0,93,1207	0/0:41,0:41:99:0,114,1480	0/0:35,0:35:99:0,105,1348	0/0:30,0:30:90.29:0,90,1169	0/0:20,0:20:51.17:0,51,662	0/0:33,0:33:93.30:0,93,1207	0/0:25,0:25:72.22:0,72,920	0/0:39,0:39:99:0,117,1505	0/0:47,0:47:99:0,141,1831	0/0:36,0:36:99:0,105,1363	0/0:24,0:24:69.21:0,69,881	1/1:0,28:28:72.24:1079,72,0	1/1:0,24:24:72.21:1036,72,0	1/1:0,24:24:63.21:944,63,0	1/1:0,54:54:99:2068,138,0	0/0:22,0:22:66.20:0,66,843	0/0:16,0:16:48.16:0,48,623	0/0:30,0:30:87.24:0,87,1102	0/0:40,0:40:99:0,114,1480	1/1:2,23:25:33.24:953,33,0	1/1:2,28:31:78.16:1151,78,0	0/0:17,0:17:45.15:0,45,584
chr10	97294479	.	CAAG	C	8404.38	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=18.382;DP=739;FS=0.000;HRun=0;HaplotypeScore=124.3135;InbreedingCoeff=0.9982;MQ=75.86;MQ0=0;MQRankSum=-6.159;QD=42.66;ReadPosRankSum=1.653;VQSLOD=5.8078;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:42:99:1718,105,0	0/0:17,0:17:51.18:0,51,1172	0/0:21,0:22:45.87:0,46,913	0/0:12,0:12:27.04:0,27,414	0/0:29,0:29:87.26:0,87,1914	0/0:17,0:17:51.16:0,51,1131	0/0:30,0:30:87.28:0,87,1947	0/0:26,0:26:75.24:0,75,1603	0/0:29,0:29:87.30:0,87,1963	0/0:29,0:29:78.26:0,78,1730	0/0:20,0:20:60.19:0,60,1324	0/0:25,0:25:72.25:0,72,1658	0/0:19,0:19:57.20:0,57,1310	0/0:30,0:30:90.29:0,90,1996	0/0:37,0:37:99:0,108,2488	0/0:23,0:23:69.24:0,69,1571	0/0:32,0:32:93.32:0,93,2144	0/0:19,0:19:57.20:0,57,1313	1/1:1,29:30:84.27:1400,84,0	1/1:1,32:33:93.06:1481,93,0	1/1:0,44:44:95.98:1484,96,0	0/0:30,0:30:90.31:0,90,2010	0/0:20,0:20:60.11:0,60,1286	0/0:39,0:39:99:0,117,2607	0/0:31,0:31:87.28:0,87,1940	1/1:0,28:28:84.25:1365,84,0	1/1:0,20:20:57.19:956,57,0	0/0:6,0:6:18.06:0,18,401
chr10	97294813	.	AC	A	5728.96	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.364;DP=733;FS=4.500;HRun=2;HaplotypeScore=77.1936;InbreedingCoeff=0.9928;MQ=77.38;MQ0=0;MQRankSum=-4.091;QD=36.49;ReadPosRankSum=2.225;VQSLOD=5.5872;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:72.14:0,72,1025	0/0:19,0:19:54.18:0,54,805	0/0:12,0:12:36.09:0,36,481	0/0:20,0:20:55.02:0,55,715	0/0:16,0:16:48.16:0,48,717	0/0:16,0:16:48.16:0,48,719	0/0:31,0:31:87.29:0,87,1301	0/0:30,0:30:90.27:0,90,1304	0/0:30,0:30:90.30:0,90,1347	0/0:32,0:32:96.31:0,96,1403	0/0:17,0:17:51.17:0,51,761	0/0:35,0:35:99:0,102,1480	0/0:27,0:27:81.23:0,81,1151	0/0:28,0:28:84.24:0,84,1188	0/0:37,0:37:99:0,108,1569	0/0:27,0:27:78.26:0,78,1168	0/0:35,0:35:99:0,102,1527	0/0:20,0:20:57.13:0,57,808	1/1:1,18:19:54.18:699,54,0	1/1:0,30:30:90.25:1148,90,0	1/1:1,32:33:93.23:1186,93,0	0/0:28,0:28:81.25:0,81,1172	0/0:29,0:29:86.93:0,87,1204	0/0:26,0:26:78.26:0,78,1169	0/0:27,0:27:75.24:0,75,1103	1/1:2,34:36:60.32:1250,60,0	1/1:0,39:39:99:1446,111,0	0/0:4,0:4:12.02:0,12,159
chr10	97294874	.	C	CTTTGTTTG	13668.71	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.264;DP=763;FS=24.411;HRun=0;HaplotypeScore=190.6040;InbreedingCoeff=0.9963;MQ=74.15;MQ0=0;MQRankSum=-15.086;QD=74.29;ReadPosRankSum=-2.503;VQSLOD=2.9227;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,22:32:57.04:1949,57,0	0/0:14,0:14:33.09:0,33,811	0/0:32,0:32:47.50:0,48,1199	0/0:23,0:23:35.98:0,36,762	0/0:19,0:19:54.17:0,54,1365	0/0:19,0:19:45.15:0,45,1168	0/0:19,0:19:45.15:0,45,1165	0/0:46,0:46:99:0,108,2341	0/0:27,0:27:60.20:0,60,1434	0/0:41,0:41:99:0,102,2487	0/0:27,0:27:63.22:0,63,1626	0/0:27,0:27:48.15:0,48,1208	0/0:26,0:26:72.22:0,72,1779	0/0:24,0:24:63.22:0,63,1618	0/0:38,0:38:81.28:0,81,2125	0/0:25,0:25:69.16:0,69,1508	0/0:22,0:22:57.17:0,57,1424	0/0:26,0:26:75.20:0,75,1757	1/1:19,9:28:56.99:1784,57,0	1/1:16,20:37:93.19:3122,93,0	1/1:9,2:11:24:513,24,0	0/0:25,0:25:57.15:0,57,1346	0/0:40,0:40:99:0,99,2412	0/0:32,0:32:72.25:0,72,1867	0/0:18,0:18:48.16:0,48,1223	1/1:22,17:39:99:3333,99,0	1/1:19,18:36:84.23:2968,84,0	0/0:9,0:9:15.05:0,15,382
chr10	97295314	.	C	CGTGT	516.68	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=5.063;DP=673;FS=1.545;HRun=0;HaplotypeScore=142.9781;InbreedingCoeff=0.1778;MQ=62.66;MQ0=5;MQRankSum=-0.589;QD=3.40;ReadPosRankSum=-2.772;VQSLOD=2.1654;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:39.48:0,39,387	0/0:16,0:16:36.07:0,36,539	0/0:24,0:9:9.01:0,9,120	0/0:29,0:17:26.74:0,27,350	0/0:22,0:22:60.12:0,60,929	0/0:17,0:18:47.12:0,47,682	0/0:29,0:29:60.16:0,60,934	0/0:29,0:29:51.05:0,51,701	0/0:23,0:23:60.20:0,60,992	0/0:34,0:34:87.14:0,87,1308	0/0:13,0:13:33.08:0,33,509	0/0:26,0:26:57.14:0,57,909	0/0:25,0:25:54.17:0,54,839	0/0:14,0:14:39.13:0,39,655	0/0:25,0:26:59.35:0,59,880	0/0:12,0:14:36.10:0,36,518	0/0:44,0:44:99:0,99,1476	1/1:7,11:23:24.25:430,24,0	0/1:26,0:25:82.93:117,0,83	0/1:15,0:15:16.35:16,0,68	0/1:42,0:42:15.28:15,0,299	0/0:25,0:25:66.05:0,66,971	0/0:20,0:21:48.10:0,48,780	0/0:26,0:26:69.16:0,69,1073	0/0:18,0:18:45.12:0,45,697	0/1:29,0:29:46.12:46,0,172	0/1:17,0:17:27.39:27,0,141	0/0:8,0:9:18.03:0,18,221
chr10	97295326	.	TGC	T	1540.24	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=10.366;DP=689;FS=9.205;HRun=0;HaplotypeScore=103.2026;InbreedingCoeff=0.1232;MQ=55.98;MQ0=9;MQRankSum=-1.483;QD=6.82;ReadPosRankSum=-3.816;VQSLOD=1.0462;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:36,6:41:62.62:577,63,0	0/0:14,0:14:20.29:0,20,433	0/1:23,0:5:8:8,0,61	0/0:31,0:14:1.84:0,2,219	0/0:24,0:24:19:0,19,780	0/0:21,0:21:12.12:0,12,622	0/0:31,0:31:48.32:0,48,916	0/0:29,0:29:70.63:0,71,653	0/0:26,0:26:29.17:0,29,906	0/0:36,0:35:75:0,75,1391	0/0:13,0:13:20.25:0,20,363	0/0:24,0:24:44.22:0,44,828	0/0:26,0:26:51.33:0,51,880	0/0:15,0:15:45.09:0,45,749	0/0:26,0:26:20.42:0,20,872	0/0:16,0:16:8.72:0,9,385	0/0:46,0:46:42.95:0,43,1465	1/1:22,0:22:2.25:40,2,0	0/1:24,0:22:10.75:276,0,11	0/1:14,0:13:32.52:136,0,33	0/1:38,0:38:99:265,0,133	0/0:24,0:24:49.60:0,50,887	0/0:24,0:24:14.57:0,15,590	0/0:30,0:30:80.87:0,81,1118	0/1:17,0:17:2.71:3,0,503	0/1:28,0:28:87.79:281,0,88	0/1:18,0:18:99:99,0,126	0/0:7,0:7:0.49:0,0,167
chr10	97295328	.	CGT	C	236.18	PASS	AB=0.869;AC=13;AF=0.232;AN=56;BaseQRankSum=6.161;DP=687;FS=1.336;HRun=0;HaplotypeScore=108.4900;InbreedingCoeff=-0.0078;MQ=56.00;MQ0=9;MQRankSum=0.889;QD=0.85;ReadPosRankSum=0.379;VQSLOD=2.0311;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:41:6.89:73,7,0	0/1:11,3:14:14.48:14,0,246	1/1:23,0:5:2.26:12,2,0	0/0:31,0:14:16.45:0,16,155	0/1:20,4:24:69.37:69,0,532	0/0:21,0:22:30.05:0,30,571	0/1:25,6:31:10.84:11,0,761	0/0:26,0:26:30.08:0,30,396	0/1:24,2:26:8.48:8,0,726	0/0:39,0:38:69.75:0,70,1115	0/1:11,3:14:14.77:15,0,182	0/0:23,1:24:12.57:0,13,599	0/0:26,0:26:26.27:0,26,727	0/0:15,0:15:39.12:0,39,588	0/0:22,3:26:4.92:0,5,644	0/1:15,1:16:10.59:11,0,277	0/1:38,7:46:36.58:37,0,1266	0/0:21,0:21:26.44:0,26,229	0/0:23,0:21:13.91:0,14,248	0/0:12,0:11:4.79:0,5,123	0/0:38,0:38:41.50:0,42,575	0/0:23,0:25:18.22:0,18,636	0/1:21,3:24:61.60:62,0,473	0/0:27,3:30:54.18:0,54,845	0/1:14,3:17:73.33:73,0,341	0/0:30,0:30:43.49:0,43,489	0/0:15,0:15:24.04:0,24,342	0/0:7,0:7:7.27:0,7,98
chr10	97295354	.	CGT	C	2672.32	PASS	AB=0.900;AC=11;AF=0.196;AN=56;BaseQRankSum=6.281;DP=661;FS=5.326;HRun=0;HaplotypeScore=97.4997;InbreedingCoeff=0.8473;MQ=67.26;MQ0=4;MQRankSum=-0.978;QD=17.94;ReadPosRankSum=-2.050;VQSLOD=2.7885;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,41:44:48.10:655,48,0	0/0:9,0:9:20.56:0,21,332	0/0:22,0:16:48.14:0,48,785	0/0:35,0:23:56.40:0,56,790	0/0:21,0:21:59.63:0,60,911	0/0:21,0:21:60.18:0,60,1017	0/0:33,0:33:83.66:0,84,1339	0/0:24,0:24:66.18:0,66,1070	0/0:29,0:29:77.21:0,77,1305	0/0:29,0:29:87.20:0,87,1391	0/0:10,0:10:20.63:0,21,286	0/0:24,0:24:68.68:0,69,1148	0/0:23,0:23:66.12:0,66,1160	0/0:22,0:22:66.16:0,66,1049	0/0:29,0:29:77.86:0,78,1200	0/0:15,0:15:44.96:0,45,710	0/0:52,0:52:99:0,137,2209	0/0:19,0:19:51.10:0,51,799	1/1:11,4:14:29.03:294,29,0	0/1:8,1:8:13.98:134,0,14	1/1:32,6:38:66.63:911,67,0	0/0:25,0:25:75.20:0,75,1224	0/0:20,0:20:49.74:0,50,795	0/0:28,0:28:72.18:0,72,1187	0/0:15,0:15:44.13:0,44,672	1/1:23,2:25:54.18:529,54,0	1/1:15,2:17:2.96:321,3,0	0/0:7,0:7:21.02:0,21,274
chr10	97295937	.	CTT	C	6080.95	PASS	AB=0.528;AC=11;AF=0.196;AN=56;BaseQRankSum=15.033;DP=599;FS=3.282;HRun=2;HaplotypeScore=76.2958;InbreedingCoeff=0.8807;MQ=88.14;MQ0=0;MQRankSum=-2.230;QD=46.42;ReadPosRankSum=2.612;VQSLOD=4.8171;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:81.28:1321,81,0	0/0:4,0:4:12.04:0,12,244	0/0:27,0:27:81.28:0,81,1605	0/0:16,0:16:42.14:0,42,827	0/0:29,0:29:87.28:0,87,1711	0/0:31,0:31:90.31:0,90,1829	0/0:14,0:14:42.14:0,42,847	0/0:31,0:31:87.29:0,87,1727	0/0:15,0:15:45.15:0,45,905	0/0:25,0:25:75.25:0,75,1486	0/0:19,0:19:57.20:0,57,1134	0/0:14,0:14:42.14:0,42,844	0/0:23,0:23:69.22:0,69,1366	0/0:22,0:22:66.23:0,66,1341	0/0:23,0:23:69.22:0,69,1366	0/0:19,0:19:54.16:0,54,1026	0/0:22,0:22:66.23:0,66,1331	0/0:20,0:20:57.20:0,57,1147	1/1:0,20:20:60.20:978,60,0	1/1:0,21:21:60.20:979,60,0	1/1:0,21:21:60.20:952,60,0	0/0:25,0:25:75.26:0,75,1499	0/0:25,0:25:75.26:0,75,1524	0/0:19,0:19:57.20:0,57,1143	0/0:23,0:23:69.24:0,69,1402	0/1:2,17:19:64.79:775,0,65	1/1:0,23:23:66.23:1076,66,0	0/0:22,0:22:66.23:0,66,1340
chr10	97296043	.	G	GATGTTTAA	12857.45	PASS	AB=0.622;AC=11;AF=0.196;AN=56;BaseQRankSum=-5.939;DP=568;FS=0.809;HRun=0;HaplotypeScore=137.4216;InbreedingCoeff=0.8851;MQ=77.85;MQ0=0;MQRankSum=-14.669;QD=103.69;ReadPosRankSum=-1.896;VQSLOD=5.3695;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,6:10:21.07:856,21,0	0/0:11,0:11:30.10:0,30,861	0/0:25,0:24:63.19:0,63,1530	0/0:16,0:16:28.93:0,29,957	0/0:26,0:26:75.26:0,75,2079	0/0:20,0:20:60.19:0,60,1625	0/0:21,0:21:60.19:0,60,1604	0/0:26,0:26:63.22:0,63,1725	0/0:18,0:18:54.19:0,54,1486	0/0:31,0:31:90.31:0,90,2505	0/0:33,0:33:96.33:0,96,2687	0/0:19,0:19:57.18:0,57,1554	0/0:17,0:17:51.18:0,51,1458	0/0:15,0:15:42.13:0,42,1135	0/0:18,0:18:51.18:0,51,1463	0/0:11,0:11:33.11:0,33,912	0/0:20,0:20:57.20:0,57,1600	0/0:21,0:21:63.19:0,63,1658	1/1:12,9:23:69.19:2595,69,0	1/1:10,25:37:99:4311,108,0	1/1:5,5:11:24.08:837,24,0	0/0:21,0:21:63.22:0,63,1730	0/0:22,0:22:66.20:0,66,1770	0/0:22,0:22:63.20:0,63,1732	0/0:18,0:18:54.19:0,54,1533	0/1:9,13:23:99:2339,0,189	1/1:5,11:19:48.16:1920,48,0	0/0:13,0:13:39.13:0,39,1119
chr10	97296110	.	CTG	C	831.57	PASS	AB=0.910;AC=29;AF=0.537;AN=54;BaseQRankSum=3.291;DP=658;FS=2.212;HRun=0;HaplotypeScore=88.7726;InbreedingCoeff=-0.2571;MQ=64.82;MQ0=24;MQRankSum=0.089;QD=1.52;ReadPosRankSum=0.324;VQSLOD=1.2093;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,3:25:12.02:130,12,0	0/0:15,0:15:12.04:0,12,177	./.	0/1:64,0:35:0:0,0,0	0/1:15,1:18:8.40:8,0,251	0/0:17,0:16:11.98:0,12,132	0/1:28,1:29:31.74:32,0,164	0/1:29,0:29:13.80:14,0,15	0/1:24,1:26:2.17:2,0,352	0/1:19,4:23:46.80:47,0,109	0/1:20,1:19:23.37:23,0,72	0/1:19,2:22:90.21:90,0,112	0/1:18,3:20:76.17:76,0,140	0/1:16,1:18:8.35:8,0,266	0/1:12,3:15:46.80:47,0,135	0/0:15,0:15:17.98:0,18,221	0/1:31,3:34:76.42:76,0,395	0/1:18,1:19:45.99:46,0,257	1/1:12,1:12:3.01:32,3,0	1/1:18,0:19:2.77:14,3,0	1/1:21,1:22:12:113,12,0	0/1:21,1:22:15.34:15,0,124	0/1:15,6:21:43.79:44,0,157	0/1:31,4:35:28.98:29,0,384	0/1:13,2:15:14.34:14,0,204	1/1:19,0:19:2.97:21,3,0	1/1:12,2:16:14.54:107,15,0	0/0:6,0:6:9.02:0,9,115
chr10	97297590	.	TG	T	995.92	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.382;DP=732;FS=2.434;HRun=2;HaplotypeScore=84.3127;InbreedingCoeff=0.9998;MQ=82.31;MQ0=0;MQRankSum=-3.174;QD=33.20;ReadPosRankSum=2.137;VQSLOD=3.8068;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1706	0/0:13,0:13:39.10:0,39,561	0/0:24,0:24:63.26:0,63,882	0/0:16,0:16:39.62:0,40,586	0/0:25,0:25:75.24:0,75,1103	0/0:23,0:23:69.23:0,69,1034	0/0:31,0:31:93.31:0,93,1386	0/0:40,0:40:99:0,120,1746	0/0:24,0:24:69.23:0,69,1031	0/0:33,0:33:99:0,99,1460	0/0:20,0:20:57.19:0,57,854	0/0:27,0:27:75.25:0,75,1123	0/0:28,0:28:81.26:0,81,1188	0/0:26,0:26:78.26:0,78,1166	0/0:28,0:28:84.25:0,84,1217	0/0:22,0:22:66.22:0,66,989	0/0:26,0:26:72.23:0,72,1058	1/1:0,30:30:84.27:1091,84,0	0/0:30,0:30:87.27:0,87,1274	0/0:27,0:27:81.27:0,81,1214	0/0:26,0:26:78.26:0,78,1168	0/0:25,0:25:75.25:0,75,1120	0/0:20,0:20:60.20:0,60,897	0/0:24,0:24:66.22:0,66,989	0/0:14,0:14:42.13:0,42,612	0/0:31,0:31:93.32:0,93,1394	0/0:39,0:37:99:0,117,1723	0/0:20,0:20:60.17:0,60,855
chr10	97299607	.	GCATC	G	5902.07	PASS	AB=0.569;AC=9;AF=0.161;AN=56;BaseQRankSum=14.553;DP=814;FS=6.011;HRun=0;HaplotypeScore=145.8797;InbreedingCoeff=0.9156;MQ=87.69;MQ0=0;MQRankSum=-8.488;QD=43.72;ReadPosRankSum=-1.814;VQSLOD=4.9421;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,3749	0/0:9,0:9:27.09:0,27,753	0/0:33,0:33:96.26:0,96,2335	0/0:26,0:26:71.97:0,72,1585	0/0:24,0:24:66.23:0,66,1835	0/0:28,0:27:81.28:0,81,2170	0/0:40,0:40:99:0,117,2956	0/0:33,0:33:93.31:0,93,2400	0/0:26,0:26:69.24:0,69,1817	0/0:41,0:41:99:0,117,3238	0/0:19,0:19:57.15:0,57,1493	0/0:24,0:24:72.23:0,72,1882	0/0:29,0:29:87.30:0,87,2397	0/0:23,0:23:66.23:0,66,1847	0/0:37,0:37:99:0,111,2984	0/0:35,0:35:99:0,105,2799	0/0:36,0:36:99:0,105,2752	0/0:35,0:35:99:0,105,2820	1/1:2,13:15:39.10:709,39,0	1/1:4,17:21:51.09:938,51,0	1/1:2,34:36:75.24:1496,75,0	0/0:29,1:30:30.47:0,30,2340	0/0:20,0:20:60.21:0,60,1641	0/0:44,0:44:99:0,132,3693	0/0:24,0:24:72.25:0,72,2002	0/1:8,25:33:2.77:1321,0,3	1/1:2,28:30:72.25:1437,72,0	0/0:16,0:16:45.15:0,45,1206
chr10	97300894	.	AGG	A	5191.23	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.807;DP=567;FS=11.626;HRun=6;HaplotypeScore=74.8730;InbreedingCoeff=0.9909;MQ=84.27;MQ0=1;MQRankSum=-1.387;QD=33.07;ReadPosRankSum=1.872;VQSLOD=3.5966;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:35:87.29:1160,87,0	0/0:5,0:5:15.04:0,15,242	0/0:21,0:21:39.87:0,40,631	0/0:25,0:25:46.60:0,47,689	0/0:17,0:17:51.16:0,51,874	0/0:18,0:18:51.16:0,51,866	0/0:35,0:35:96.26:0,96,1605	0/0:25,0:25:57.19:0,57,995	0/0:19,0:19:57.18:0,57,997	0/0:22,0:22:60.19:0,60,1020	0/0:13,0:13:36.12:0,36,636	0/0:16,0:16:41.65:0,42,740	0/0:15,0:15:45.14:0,45,782	0/0:20,0:20:60.19:0,60,1051	0/0:18,0:18:54.19:0,54,967	0/0:17,0:17:51.17:0,51,916	0/0:29,0:29:72.21:0,72,1262	0/0:22,0:22:57.15:0,57,987	1/1:3,15:18:45.13:581,45,0	1/1:4,14:18:42.13:543,42,0	1/1:0,42:42:99:1439,108,0	0/0:5,0:5:15.05:0,15,265	0/0:9,0:9:21.07:0,21,373	0/0:28,0:28:75.24:0,75,1293	0/0:20,0:20:54.19:0,54,962	1/1:2,24:26:18.21:828,18,0	1/1:0,18:18:48.16:640,48,0	0/0:9,0:9:27.09:0,27,482
chr10	97301524	.	C	CA	8682.65	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-14.783;DP=736;FS=7.677;HRun=1;HaplotypeScore=71.9017;InbreedingCoeff=0.9979;MQ=89.62;MQ0=0;MQRankSum=-1.274;QD=40.96;ReadPosRankSum=0.328;VQSLOD=5.1727;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:40:99:1708,114,0	0/0:9,0:9:27.09:0,27,349	0/0:29,0:29:75.15:0,75,973	0/0:28,0:28:65.72:0,66,737	0/0:18,0:18:48.09:0,48,608	0/0:23,0:23:69.22:0,69,895	0/0:37,0:37:99:0,105,1347	0/0:34,0:34:96.31:0,96,1234	0/0:20,0:20:60.19:0,60,779	0/0:26,0:26:66.18:0,66,857	0/0:7,0:7:18.06:0,18,233	0/0:25,0:25:72.22:0,72,921	0/0:14,0:14:39.13:0,39,505	0/0:26,0:26:78.25:0,78,1011	0/0:35,0:35:99:0,105,1343	0/0:11,0:11:30.10:0,30,390	0/0:30,0:30:87.27:0,87,1114	0/0:33,0:33:93.30:0,93,1205	1/1:0,28:28:84.27:1240,84,0	1/1:1,13:14:30.10:450,30,0	1/1:0,71:71:99:2788,187,0	0/0:21,0:21:63.20:0,63,814	0/0:18,0:18:51.15:0,51,648	0/0:26,0:26:78.25:0,78,1013	0/0:29,0:29:81.19:0,81,992	1/1:1,34:35:66.37:1463,66,0	1/1:0,24:24:69.23:1034,69,0	0/0:25,0:25:72.23:0,72,933
chr10	97302427	.	GTC	G	131.30	PASS	AB=0.907;AC=8;AF=0.267;AN=30;BaseQRankSum=0.806;DP=410;FS=2.944;HRun=0;HaplotypeScore=26.8556;InbreedingCoeff=-0.4586;MQ=21.19;MQ0=155;MQRankSum=1.056;QD=0.94;ReadPosRankSum=0.852;VQSLOD=0.7895;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:6:6.02:0,6,91	./.	./.	0/1:18,1:9:24.54:25,0,58	./.	0/0:11,0:7:3:0,3,26	0/0:17,0:4:5.98:0,6,46	0/0:13,0:8:9.49:0,9,120	0/1:16,0:13:17.16:17,0,237	./.	0/0:15,0:8:3.01:0,3,45	0/1:11,1:9:24.55:25,0,82	0/1:10,5:10:27.55:28,0,39	0/1:17,1:14:35.69:36,0,121	0/1:18,1:14:23.36:23,0,82	0/1:21,1:13:30.55:66,0,31	0/0:15,0:8:4.87:0,5,16	./.	./.	./.	./.	./.	0/1:13,5:15:18.74:19,0,146	./.	./.	./.	0/0:19,0:15:8.90:0,9,137
chr10	97303933	.	A	AT	6728.45	PASS	AB=0.978;AC=14;AF=0.250;AN=56;BaseQRankSum=2.925;DP=674;FS=0.467;HRun=2;HaplotypeScore=211.0394;InbreedingCoeff=0.7261;MQ=49.11;MQ0=0;MQRankSum=-4.339;QD=29.38;ReadPosRankSum=-0.729;VQSLOD=4.1080;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:33:80.01:1175,80,0	0/0:12,0:12:20.78:0,21,275	0/1:21,1:15:20.25:20,0,359	0/0:14,0:9:5.25:0,5,200	0/0:26,1:29:11.04:0,11,194	0/0:12,0:14:4.97:0,5,259	0/0:18,0:20:28.26:0,28,507	0/0:22,0:23:15.54:0,16,745	0/0:18,0:19:36.50:0,37,615	0/0:42,1:46:4.66:0,5,1125	0/0:18,1:22:24.95:0,25,352	0/0:26,0:30:34.81:0,35,896	0/0:24,0:25:44.74:0,45,700	0/0:21,0:23:39.62:0,40,616	0/0:24,0:25:55.73:0,56,707	0/0:17,0:18:36.37:0,36,502	0/0:15,0:15:44.80:0,45,539	0/0:11,0:11:30.10:0,30,413	1/1:1,23:26:66.05:1064,66,0	1/1:4,21:31:47.29:656,47,0	1/1:4,26:31:44.93:620,45,0	0/0:23,0:27:20.83:0,21,489	0/0:16,1:23:27.85:0,28,448	0/0:17,0:19:12.44:0,12,163	0/0:27,1:30:8.54:0,9,671	1/1:6,38:47:90:1882,90,0	1/1:0,29:30:80.82:1292,81,0	0/1:8,0:8:19.92:20,0,152
chr10	97304245	.	CTCA	C	7840.25	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=16.069;DP=760;FS=4.881;HRun=0;HaplotypeScore=118.5384;InbreedingCoeff=0.9921;MQ=87.00;MQ0=0;MQRankSum=-2.938;QD=41.70;ReadPosRankSum=1.797;VQSLOD=6.3510;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,41:44:99:1686,111,0	0/0:10,0:10:27.09:0,27,601	0/0:32,0:32:90.29:0,90,1897	0/0:26,0:26:64.94:0,65,1316	0/0:34,0:34:90.25:0,90,1877	0/0:30,0:30:87.28:0,87,1899	0/0:24,0:24:66.23:0,66,1457	0/0:35,0:35:99:0,99,2213	0/0:35,0:35:99:0,99,2185	0/0:40,0:40:99:0,117,2446	0/0:16,0:16:45.15:0,45,1003	0/0:28,0:28:78.22:0,78,1611	0/0:32,0:32:90.31:0,90,2010	0/0:28,0:28:78.24:0,78,1639	0/0:27,0:27:72.22:0,72,1468	0/0:31,0:31:93.27:0,93,1951	0/0:16,0:16:48.16:0,48,1072	0/0:25,0:25:72.25:0,72,1605	1/1:1,25:26:75.23:1197,75,0	1/1:0,29:29:84.29:1368,84,0	1/1:1,32:33:75.26:1224,75,0	0/0:26,0:26:66.21:0,66,1428	0/0:25,0:25:66.23:0,66,1473	0/0:24,0:24:72.25:0,72,1608	0/0:19,0:19:51.15:0,51,1051	1/1:1,25:26:11.20:1122,11,0	1/1:1,29:30:77.96:1242,78,0	0/0:9,0:9:27.09:0,27,603
chr10	97304842	.	AGTTTCCCAC	A	4971.13	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.806;DP=672;FS=13.044;HRun=0;HaplotypeScore=190.2945;InbreedingCoeff=0.9862;MQ=85.61;MQ0=1;MQRankSum=-11.462;QD=47.80;ReadPosRankSum=2.276;VQSLOD=3.4294;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:27:42.14:1272,42,0	0/0:12,0:12:33.11:0,33,1514	0/0:24,0:23:60.64:0,61,2297	0/0:25,0:24:63.22:0,63,2763	0/0:36,0:36:99:0,108,5131	0/0:25,0:25:69.24:0,69,3285	0/0:28,0:28:78.27:0,78,3685	0/0:40,0:40:99:0,117,5243	0/0:26,0:26:72.25:0,72,3478	0/0:33,0:33:90.30:0,90,4056	0/0:21,0:21:57.20:0,57,2645	0/0:22,0:22:66.23:0,66,3121	0/0:18,0:18:48.16:0,48,2226	0/0:26,0:26:75.26:0,75,3573	0/0:27,0:27:78.27:0,78,3547	0/0:11,0:11:33.11:0,33,1486	0/0:40,0:40:99:0,117,5560	0/0:36,0:36:99:0,99,4777	1/1:7,12:19:30.10:868,30,0	1/1:4,16:20:21.07:602,21,0	1/1:1,10:11:9.03:273,9,0	0/0:23,0:23:69.23:0,69,3193	0/0:32,0:32:90.30:0,90,4079	0/0:23,0:23:66.18:0,66,3002	0/0:32,0:32:93.32:0,93,4224	1/1:0,10:10:24.08:684,24,0	1/1:3,14:17:42.14:1273,42,0	0/0:8,0:8:24.08:0,24,1159
chr10	97305126	.	GTGAC	G	1521.94	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=8.836;DP=833;FS=11.934;HRun=0;HaplotypeScore=163.7909;InbreedingCoeff=0.3827;MQ=73.38;MQ0=1;MQRankSum=-6.026;QD=10.15;ReadPosRankSum=1.266;VQSLOD=2.2286;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:9.32:155,9,0	0/0:11,0:11:21.07:0,21,512	0/0:35,0:30:33.10:0,33,665	0/0:42,0:38:48.10:0,48,898	0/0:37,0:37:81.23:0,81,1809	0/0:12,0:12:30.06:0,30,629	0/0:31,0:31:63.13:0,63,1405	0/0:32,0:32:42.13:0,42,896	0/0:41,0:41:50.15:0,50,2019	0/0:35,0:35:78.24:0,78,1706	0/0:25,0:25:51.16:0,51,1158	0/0:46,0:46:99:0,105,2359	0/0:43,0:43:99:0,99,2338	0/0:38,0:38:75.17:0,75,1554	0/0:45,0:45:99:0,99,2271	0/0:33,0:33:44.32:0,44,1935	0/0:46,0:46:99:0,102,2364	1/1:7,20:27:48.16:786,48,0	0/1:20,0:20:27.53:188,0,28	0/1:19,0:19:12.42:12,0,28	0/0:17,0:17:3.11:0,3,8	0/0:27,0:27:54.17:0,54,1253	0/0:22,0:22:45.15:0,45,1073	0/0:40,0:40:84.29:0,84,2022	0/0:20,0:20:48.15:0,48,1118	0/1:35,0:35:99:357,0,227	0/1:27,0:27:82.19:166,0,82	0/0:5,0:5:12.04:0,12,293
chr10	97305142	.	C	CTGAATGAA	5519.29	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.158;DP=867;FS=21.848;HRun=0;HaplotypeScore=222.2587;InbreedingCoeff=0.9621;MQ=60.77;MQ0=3;MQRankSum=-12.576;QD=28.60;ReadPosRankSum=-2.634;VQSLOD=2.6050;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,11:30:14.39:400,14,0	0/0:8,0:8:24.07:0,24,619	0/0:34,0:28:71.63:0,72,1294	0/0:37,0:33:72.46:0,72,1508	0/0:36,0:36:99:0,99,2403	0/0:15,0:15:39.12:0,39,891	0/0:28,0:28:81.25:0,81,1932	0/0:29,0:29:78.18:0,78,1519	0/0:42,0:42:99:0,117,2824	0/0:34,0:34:99:0,99,2350	0/0:26,0:26:72.17:0,72,1567	0/0:42,0:42:99:0,120,3002	0/0:41,0:41:99:0,108,2798	0/0:37,0:37:99:0,108,2293	0/0:40,0:40:99:0,114,2868	0/0:35,0:35:99:0,104,2605	0/0:49,0:49:99:0,132,3135	0/0:29,0:29:66.16:0,66,1187	1/1:12,11:26:59.71:1094,60,0	1/1:3,8:27:14.97:251,15,0	1/1:4,11:26:8.92:96,9,0	0/0:26,0:26:72.15:0,72,1597	0/0:22,0:22:57.18:0,57,1417	0/0:40,0:40:99:0,114,2720	0/0:20,0:20:57.15:0,57,1395	1/1:6,20:40:9.08:2520,9,0	1/1:9,16:43:45.15:1158,45,0	0/0:4,0:4:12.04:0,12,339
chr10	97306623	.	T	TGCA	7006.30	PASS	AB=0.906;AC=54;AF=0.964;AN=56;BaseQRankSum=3.765;DP=461;FS=44.988;HRun=0;HaplotypeScore=151.7100;InbreedingCoeff=-0.0444;MQ=90.01;MQ0=0;MQRankSum=-8.971;QD=15.20;ReadPosRankSum=1.017;VQSLOD=2.8665;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:32.05:184,32,0	1/1:11,0:11:14.62:140,15,0	0/1:21,3:24:99:172,0,317	0/1:22,2:24:89.47:89,0,369	1/1:19,0:19:30.69:163,31,0	1/1:17,0:17:34.37:364,34,0	1/1:12,0:12:30.25:245,30,0	1/1:17,0:17:41.33:400,41,0	1/1:17,0:17:37.91:362,38,0	1/1:10,0:10:25.76:195,26,0	1/1:16,0:16:31.04:214,31,0	1/1:24,0:24:51.97:466,52,0	1/1:17,0:17:29.15:290,29,0	1/1:15,0:15:23.55:234,24,0	1/1:27,0:27:55.73:586,56,0	1/1:23,0:23:39.07:419,39,0	1/1:27,0:27:45.63:414,46,0	1/1:9,0:9:8.71:82,9,0	1/1:7,0:7:17.98:282,18,0	1/1:9,0:9:18.99:202,19,0	1/1:22,0:22:35.67:171,36,0	1/1:12,0:12:16.71:145,17,0	1/1:12,0:12:19.78:109,20,0	1/1:17,0:17:17.24:174,17,0	1/1:21,0:21:50.81:399,51,0	1/1:12,0:12:29.43:274,29,0	1/1:13,0:13:17.16:156,17,0	1/1:10,0:10:8.69:72,9,0
chr10	97306859	.	AGTT	A	1297.54	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=17.818;DP=668;FS=22.271;HRun=0;HaplotypeScore=140.5733;InbreedingCoeff=0.9995;MQ=86.50;MQ0=0;MQRankSum=-1.993;QD=7.01;ReadPosRankSum=3.349;VQSLOD=1.6044;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:38,2:40:60.04:253,60,0	0/0:14,0:14:39.13:0,39,933	0/0:23,0:23:66.20:0,66,1531	0/0:25,0:25:64.11:0,64,1566	0/0:12,0:12:36.12:0,36,883	0/0:11,0:11:33.11:0,33,808	0/0:31,0:31:93.32:0,93,2239	0/0:24,0:24:72.25:0,72,1744	0/0:25,0:25:75.24:0,75,1787	0/0:27,0:27:78.25:0,78,1868	0/0:15,0:15:45.14:0,45,1057	0/0:31,0:31:93.32:0,93,2289	0/0:22,0:22:66.23:0,66,1624	0/0:19,0:19:57.20:0,57,1390	0/0:38,0:37:99:0,114,2688	0/0:31,0:31:93.29:0,93,2240	0/0:27,0:27:78.27:0,78,1851	1/1:28,0:28:40.08:234,40,0	1/1:12,1:13:25.76:161,26,0	1/1:19,0:19:34.38:155,34,0	1/1:39,1:40:64.79:306,65,0	0/0:26,0:26:78.25:0,78,1826	0/0:18,0:18:48.16:0,48,1178	0/0:34,0:34:99:0,102,2478	0/0:17,0:17:51.17:0,51,1188	1/1:19,1:20:31.59:213,32,0	1/1:25,0:25:48.90:174,49,0	0/0:13,0:13:39.13:0,39,960
chr10	97306860	.	GT	G	6234.12	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=17.366;DP=666;FS=18.819;HRun=2;HaplotypeScore=97.1285;InbreedingCoeff=0.9999;MQ=87.17;MQ0=0;MQRankSum=-4.209;QD=34.07;ReadPosRankSum=2.259;VQSLOD=3.1319;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,38:40:99:1262,99,0	0/0:14,0:14:36.12:0,36,536	0/0:23,0:23:66.21:0,66,944	0/0:26,0:26:66.43:0,66,999	0/0:12,0:12:36.12:0,36,538	0/0:11,0:11:33.11:0,33,494	0/0:31,0:31:90.28:0,90,1309	0/0:25,0:25:69.22:0,69,998	0/0:24,0:24:72.14:0,72,1044	0/0:26,0:26:75.22:0,75,1084	0/0:14,0:14:42.12:0,42,605	0/0:31,0:31:93.29:0,93,1353	0/0:22,0:22:66.20:0,66,933	0/0:20,0:20:60.19:0,60,863	0/0:37,0:36:99:0,108,1548	0/0:31,0:31:93.28:0,93,1336	0/0:30,0:30:81.20:0,81,1129	1/1:0,27:27:75.24:968,75,0	1/1:1,11:12:36.10:446,36,0	1/1:0,19:19:54.18:700,54,0	1/1:2,38:40:99:1323,102,0	0/0:25,0:25:72.14:0,72,1012	0/0:17,0:17:48.16:0,48,716	0/0:34,0:34:99:0,99,1439	0/0:17,0:17:45.10:0,45,648	1/1:1,19:20:60.12:718,60,0	1/1:0,25:25:63.20:817,63,0	0/0:13,0:13:39.13:0,39,583
chr10	97307625	.	G	GC	8098.67	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-11.156;DP=713;FS=10.566;HRun=2;HaplotypeScore=64.4998;InbreedingCoeff=0.9999;MQ=88.43;MQ0=0;MQRankSum=-1.192;QD=40.09;ReadPosRankSum=-0.179;VQSLOD=4.4690;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,48:49:99:2030,141,0	0/0:12,0:12:36.11:0,36,446	0/0:30,0:30:87.24:0,87,1047	0/0:20,0:20:53.89:0,54,629	0/0:21,0:21:60.19:0,60,744	0/0:23,0:23:63.20:0,63,781	0/0:17,0:17:51.16:0,51,632	0/0:27,0:27:75.23:0,75,918	0/0:20,0:20:57.18:0,57,707	0/0:38,0:38:99:0,105,1298	0/0:16,0:16:45.12:0,45,533	0/0:31,0:31:93.28:0,93,1140	0/0:26,0:26:72.20:0,72,867	0/0:27,0:27:81.24:0,81,991	0/0:25,0:25:75.24:0,75,929	0/0:31,0:30:90.27:0,90,1103	0/0:34,0:34:99:0,102,1250	1/1:0,28:28:72.24:1037,72,0	1/1:0,25:25:75.25:1079,75,0	1/1:0,20:20:60.20:863,60,0	1/1:1,29:30:90.30:1289,90,0	0/0:23,0:23:69.22:0,69,856	0/0:21,0:21:60.19:0,60,744	0/0:40,0:40:99:0,120,1488	0/0:19,0:19:54.17:0,54,669	1/1:3,24:27:38.03:980,38,0	1/1:4,19:23:57.19:821,57,0	0/0:10,0:10:30.08:0,30,358
chr10	97308530	.	A	AGGCCTGCAC	17607.92	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.243;DP=669;FS=6.275;HRun=0;HaplotypeScore=196.9547;InbreedingCoeff=0.9955;MQ=80.81;MQ0=0;MQRankSum=-17.459;QD=105.44;ReadPosRankSum=0.153;VQSLOD=4.4837;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,24:37:78.27:3549,78,0	0/0:8,0:8:18.06:0,18,558	0/0:24,0:24:63.19:0,63,1588	0/0:19,0:19:51.15:0,51,1345	0/0:23,0:23:66.23:0,66,2031	0/0:28,0:28:81.26:0,81,2353	0/0:24,0:24:72.25:0,72,2234	0/0:35,0:35:93.32:0,93,2812	0/0:30,0:30:90.30:0,90,2709	0/0:26,0:26:75.26:0,75,2213	0/0:13,0:13:36.12:0,36,1098	0/0:13,0:13:39.12:0,39,1101	0/0:30,0:30:90.31:0,90,2711	0/0:33,0:33:99:0,99,2983	0/0:30,0:30:84.27:0,84,2447	0/0:29,0:29:87.29:0,87,2539	0/0:36,0:36:99:0,99,2994	1/1:2,13:16:45.15:2200,45,0	1/1:17,8:25:63.21:2559,63,0	1/1:8,14:23:48.16:2265,48,0	1/1:12,3:17:15.05:725,15,0	0/0:21,0:21:63.22:0,63,1954	0/0:11,0:11:33.03:0,33,941	0/0:37,0:37:99:0,111,3172	0/0:19,0:19:57.20:0,57,1671	1/1:16,16:32:93.25:4141,93,0	1/1:4,13:17:48.16:2169,48,0	0/0:13,0:13:36.12:0,36,1079
chr10	97309434	.	ATGTGG	A	7069.49	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.516;DP=726;FS=31.253;HRun=0;HaplotypeScore=171.9043;InbreedingCoeff=0.9980;MQ=74.38;MQ0=0;MQRankSum=-12.939;QD=49.09;ReadPosRankSum=-0.689;VQSLOD=3.2804;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,33:40:99:1959,101,0	0/0:12,0:12:36.12:0,36,1105	0/0:21,0:21:54.17:0,54,1464	0/0:27,0:27:72.24:0,72,1992	0/0:30,0:30:81.28:0,81,2486	0/0:24,0:24:57.20:0,57,1751	0/0:34,0:34:84.29:0,84,2506	0/0:26,0:24:66.23:0,66,1977	0/0:41,0:41:99:0,117,3533	0/0:30,0:30:84.24:0,84,2398	0/0:21,0:21:57.20:0,57,1747	0/0:31,0:31:84.29:0,84,2576	0/0:24,0:24:66.23:0,66,2001	0/0:29,0:29:72.25:0,72,2207	0/0:45,0:45:99:0,114,3494	0/0:28,0:28:81.23:0,81,2414	0/0:43,0:43:99:0,123,3721	1/1:0,10:10:30.10:599,30,0	1/1:5,7:12:21.07:435,21,0	1/1:1,19:20:54.19:1119,54,0	1/1:4,11:15:20.99:351,21,0	0/0:32,0:32:84.29:0,84,2575	0/0:25,0:25:63.22:0,63,1935	0/0:29,0:29:63.22:0,63,1935	0/0:22,0:22:60.21:0,60,1843	1/1:4,20:24:60.21:1243,60,0	1/1:1,22:23:66.23:1362,66,0	0/0:8,0:8:24.08:0,24,733
chr10	97311988	.	A	AATT	8331.17	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.121;DP=705;FS=1.592;HRun=0;HaplotypeScore=118.4498;InbreedingCoeff=0.9994;MQ=86.90;MQ0=0;MQRankSum=-12.954;QD=49.01;ReadPosRankSum=-0.409;VQSLOD=6.8630;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,32:37:81.23:1776,81,0	0/0:9,0:9:27.08:0,27,436	0/0:26,0:26:74.67:0,75,1120	0/0:26,0:26:78.21:0,78,1205	0/0:24,0:24:72.25:0,72,1223	0/0:23,0:23:69.22:0,69,1140	0/0:26,0:26:78.25:0,78,1303	0/0:38,0:38:99:0,108,1791	0/0:26,0:26:72.20:0,72,1171	0/0:29,0:29:87.29:0,87,1431	0/0:17,0:17:48.16:0,48,818	0/0:29,0:29:87.30:0,87,1484	0/0:26,0:26:75.24:0,75,1252	0/0:31,0:31:90.28:0,90,1478	0/0:26,0:26:75.23:0,75,1221	0/0:29,0:29:87.28:0,87,1451	0/0:35,0:35:99:0,99,1650	1/1:0,20:20:42.14:967,42,0	1/1:2,12:14:39.13:866,39,0	1/1:1,24:26:48.16:1008,48,0	1/1:3,17:20:45.07:906,45,0	0/0:31,0:31:84.29:0,84,1421	0/0:25,0:25:63.20:0,63,1044	0/0:24,0:24:69.22:0,69,1144	0/0:27,0:27:78.24:0,78,1278	1/1:4,19:24:54.13:1097,54,0	1/1:4,24:28:75.26:1710,75,0	0/0:8,0:8:24.08:0,24,409
chr10	97313854	.	TG	T	16536.44	PASS	AB=0.843;AC=54;AF=0.964;AN=56;BaseQRankSum=1.926;DP=568;FS=2.149;HRun=4;HaplotypeScore=422.2622;InbreedingCoeff=-0.0355;MQ=46.73;MQ0=0;MQRankSum=-2.973;QD=29.11;ReadPosRankSum=1.732;VQSLOD=1.3079;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:66.20:780,66,0	1/1:0,14:14:39.12:460,39,0	0/1:5,2:7:30.05:30,0,36	0/1:9,1:9:14.90:31,0,15	1/1:3,15:18:33.08:382,33,0	1/1:3,22:25:66.20:782,66,0	1/1:1,18:19:51.05:586,51,0	1/1:1,23:24:54.17:643,54,0	1/1:1,22:22:60.18:713,60,0	1/1:2,26:28:78.19:913,78,0	1/1:2,14:16:39.59:455,40,0	1/1:3,22:25:66.09:759,66,0	1/1:1,28:29:84.23:982,84,0	1/1:0,27:27:78.23:915,78,0	1/1:2,29:30:81.14:936,81,0	1/1:2,24:26:72.22:856,72,0	1/1:1,14:15:33.10:393,33,0	1/1:1,7:8:21.06:250,21,0	1/1:3,14:17:39.11:456,39,0	1/1:4,20:23:60.18:706,60,0	1/1:3,11:14:14.93:179,15,0	1/1:1,17:18:51.15:590,51,0	1/1:2,17:19:48.14:563,48,0	1/1:0,16:16:33.57:392,34,0	1/1:0,20:20:57.16:652,57,0	1/1:4,25:29:72.21:851,72,0	1/1:2,28:30:84.13:958,84,0	1/1:1,9:10:27.08:322,27,0
chr10	97314117	.	TC	T	8452.29	PASS	AB=1.000;AC=54;AF=0.964;AN=56;BaseQRankSum=3.396;DP=701;FS=0.798;HRun=3;HaplotypeScore=131.1059;InbreedingCoeff=-0.0388;MQ=69.94;MQ0=0;MQRankSum=-3.524;QD=12.06;ReadPosRankSum=7.544;VQSLOD=2.9604;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:81.21:413,81,0	1/1:10,0:10:25.69:136,26,0	1/1:13,0:14:15.65:75,16,0	0/1:22,0:22:41.56:42,0,104	1/1:34,0:34:57.64:397,58,0	1/1:18,0:18:44.91:214,45,0	1/1:23,0:23:58.35:266,58,0	1/1:40,0:40:2.67:265,3,0	1/1:32,0:32:55.02:379,55,0	1/1:30,0:30:36.21:350,36,0	0/1:17,0:17:3.96:169,0,4	1/1:24,0:24:65.61:354,66,0	1/1:20,0:20:28.09:218,28,0	1/1:34,0:34:85.58:465,86,0	1/1:20,0:20:45.51:236,46,0	1/1:31,0:31:76.59:401,77,0	1/1:18,0:18:48.05:235,48,0	1/1:0,21:21:57.18:706,57,0	1/1:15,0:15:36.05:169,36,0	1/1:38,0:38:71.69:485,72,0	1/1:43,0:43:77.08:462,77,0	1/1:26,0:26:45.42:349,45,0	1/1:20,0:20:51.64:292,52,0	1/1:24,0:24:59.58:309,60,0	1/1:20,0:20:50.22:240,50,0	1/1:24,0:24:62.09:296,62,0	1/1:25,0:25:45.49:294,45,0	1/1:22,0:22:27.61:234,28,0
chr10	97314975	.	CT	C	12493.40	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.657;DP=653;FS=0.598;HRun=3;HaplotypeScore=219.8474;InbreedingCoeff=0.8756;MQ=78.08;MQ0=0;MQRankSum=-8.713;QD=20.41;ReadPosRankSum=4.629;VQSLOD=3.8809;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,10:26:65.86:538,66,0	1/1:4,7:11:32.10:290,32,0	0/0:25,1:26:54.14:0,54,469	0/0:14,1:15:1.70:0,2,202	1/1:16,16:32:75.13:561,75,0	1/1:14,22:36:99:807,100,0	1/1:10,14:24:63.98:377,64,0	1/1:17,12:29:73.28:589,73,0	1/1:7,16:23:62.45:404,62,0	1/1:16,16:32:52.46:652,52,0	1/1:7,15:22:52.61:424,53,0	1/1:8,16:24:57.47:407,57,0	1/1:8,13:21:47.40:377,47,0	1/1:12,16:28:70.27:512,70,0	1/1:9,20:29:81.06:702,81,0	1/1:13,19:32:79.52:622,80,0	1/1:11,7:18:46.13:381,46,0	1/1:4,10:14:38.38:308,38,0	1/1:3,15:18:41.68:335,42,0	1/1:9,7:16:35.16:310,35,0	1/1:9,8:17:34.54:284,35,0	1/1:17,13:30:75.44:686,75,0	1/1:12,18:30:81.82:669,82,0	1/1:14,11:25:68.12:604,68,0	1/1:7,8:15:36.76:279,37,0	1/1:13,12:25:71.15:685,71,0	1/1:10,19:29:72.09:522,72,0	1/1:1,5:6:18.02:172,18,0
chr10	97314980	.	A	AC	17652.66	PASS	AB=0.933;AC=53;AF=0.946;AN=56;BaseQRankSum=3.399;DP=676;FS=1.312;HRun=1;HaplotypeScore=215.3452;InbreedingCoeff=0.6597;MQ=79.07;MQ0=0;MQRankSum=-9.685;QD=26.83;ReadPosRankSum=4.155;VQSLOD=4.6192;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,10:28:68.68:714,69,0	1/1:3,8:11:32.94:375,33,0	0/1:26,2:28:14.61:15,0,407	0/0:17,0:18:32.24:0,32,211	1/1:15,15:30:79.62:724,80,0	1/1:15,23:38:99:1077,104,0	1/1:9,16:25:73.88:602,74,0	1/1:13,14:27:71.93:758,72,0	1/1:7,17:24:71.11:641,71,0	1/1:12,16:28:55.36:791,55,0	1/1:6,16:22:59.35:595,59,0	1/1:7,18:25:68.25:656,68,0	1/1:9,15:24:59.63:637,60,0	1/1:11,17:28:76.82:725,77,0	1/1:11,20:31:77.46:805,77,0	1/1:10,19:29:83.50:839,83,0	1/1:11,8:19:53.81:584,54,0	1/1:4,10:14:41.96:424,42,0	1/1:8,17:25:69.95:775,70,0	1/1:10,10:20:24.14:512,24,0	1/1:7,8:15:32.86:346,33,0	1/1:20,15:35:91.05:1038,91,0	1/1:12,18:30:86.35:891,86,0	1/1:13,13:26:77.55:891,78,0	1/1:6,7:13:38.69:352,39,0	1/1:13,11:24:69.06:818,69,0	1/1:10,22:31:86.45:827,86,0	1/1:2,5:7:21.04:240,21,0
chr10	97315078	.	TG	T	7874.43	PASS	AB=0.894;AC=54;AF=0.964;AN=56;BaseQRankSum=-3.076;DP=624;FS=2.157;HRun=3;HaplotypeScore=244.2706;InbreedingCoeff=-0.0095;MQ=78.90;MQ0=0;MQRankSum=-3.900;QD=12.62;ReadPosRankSum=5.652;VQSLOD=3.6730;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:32.28:221,32,0	1/1:9,0:9:23.39:151,23,0	0/1:16,2:18:94.21:94,0,163	0/1:21,3:24:15.31:15,0,177	1/1:28,0:28:49.06:408,49,0	1/1:33,0:33:59.67:337,60,0	1/1:20,0:20:54.26:322,54,0	1/1:38,0:38:56.72:401,57,0	1/1:22,0:22:43.40:254,43,0	1/1:30,0:30:69.97:403,70,0	1/1:20,0:20:40.30:244,40,0	1/1:25,0:25:51.48:310,51,0	1/1:28,0:28:68.36:441,68,0	1/1:23,0:23:44.02:343,44,0	1/1:20,0:20:51.31:284,51,0	1/1:17,0:17:43.61:234,44,0	1/1:23,0:22:56.92:346,57,0	1/1:15,0:15:32.24:173,32,0	1/1:23,1:24:54.75:336,55,0	1/1:35,0:35:81.05:521,81,0	1/1:19,0:19:31.70:166,32,0	1/1:27,0:27:63.32:370,63,0	1/1:26,0:26:60.98:358,61,0	1/1:9,0:9:18.80:121,19,0	1/1:22,0:22:54.71:335,55,0	1/1:21,0:21:57.79:328,58,0	1/1:23,0:23:34.40:269,34,0	1/1:8,0:8:18.42:89,18,0
chr10	97315270	.	GA	G	2781.81	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.489;DP=571;FS=4.986;HRun=8;HaplotypeScore=74.1077;InbreedingCoeff=0.9719;MQ=63.80;MQ0=2;MQRankSum=-9.740;QD=20.45;ReadPosRankSum=0.042;VQSLOD=3.7009;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,20:26:57.08:544,57,0	0/0:5,0:5:12.04:0,12,145	0/0:28,0:20:42.52:0,43,435	0/0:12,0:9:6.02:0,6,73	0/0:31,0:31:72.22:0,72,869	0/0:25,0:25:63.18:0,63,750	0/0:13,0:13:27.08:0,27,323	0/0:25,0:25:69.20:0,69,823	0/0:19,0:18:48.13:0,48,567	0/0:36,0:36:99:0,102,1206	0/0:23,0:23:57.13:0,57,670	0/0:20,0:20:42.08:0,42,480	0/0:16,0:16:33.04:0,33,362	0/0:12,0:12:27.08:0,27,326	0/0:25,0:25:66.20:0,66,797	0/0:11,0:11:30.09:0,30,362	0/0:27,1:28:40.23:0,40,758	1/1:1,10:11:27.04:260,27,0	1/1:4,11:15:35.96:328,36,0	1/1:6,16:22:51.06:485,51,0	1/1:1,11:12:18:170,18,0	0/0:27,0:27:69.13:0,69,801	0/0:25,0:25:60.18:0,60,725	0/0:20,0:20:54.17:0,54,652	0/0:25,0:25:66.20:0,66,796	1/1:2,22:24:32.80:583,33,0	1/1:1,25:26:63.10:607,63,0	0/0:7,0:7:18.03:0,18,204
chr10	97315283	.	TAA	T	2514.29	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=12.755;DP=538;FS=9.289;HRun=11;HaplotypeScore=79.9403;InbreedingCoeff=0.8971;MQ=60.18;MQ0=1;MQRankSum=-10.010;QD=18.09;ReadPosRankSum=0.175;VQSLOD=2.0104;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,18:25:54.07:567,54,0	0/0:5,0:5:15.05:0,15,231	0/0:17,0:10:5.83:0,6,38	0/1:10,0:7:1.73:2,0,30	0/0:28,0:28:69.18:0,69,1007	0/0:24,0:24:60.20:0,60,906	0/0:13,0:13:36.12:0,36,551	0/0:24,0:25:59.69:0,60,883	0/0:19,0:18:45.15:0,45,692	0/0:35,0:37:83.75:0,84,1229	0/0:22,0:24:53.67:0,54,786	0/0:16,0:18:47.64:0,48,681	0/0:13,0:13:33.11:0,33,508	0/0:12,0:12:30.07:0,30,405	0/0:21,0:21:54.17:0,54,810	0/0:10,0:10:30.06:0,30,416	0/0:30,0:34:83.61:0,84,1193	1/1:4,7:11:21.02:223,21,0	1/1:4,12:17:27:343,27,0	1/1:2,17:19:33:351,33,0	1/1:5,7:12:17.99:191,18,0	0/0:24,0:24:66.22:0,66,1016	0/0:22,0:24:59.68:0,60,866	0/0:17,0:19:50.13:0,50,689	0/0:21,0:23:56.66:0,57,800	1/1:7,15:22:4.91:464,5,0	1/1:5,18:23:54.09:564,54,0	0/0:9,0:9:27.07:0,27,392
chr10	97316264	.	ACGCGCGCGCG	A	2385.66	PASS	AB=0.744;AC=13;AF=0.232;AN=56;BaseQRankSum=7.976;DP=452;FS=8.629;HRun=0;HaplotypeScore=114.5151;InbreedingCoeff=0.6647;MQ=55.44;MQ0=23;MQRankSum=-2.761;QD=23.16;ReadPosRankSum=0.594;VQSLOD=2.2722;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:22:12.02:0,12,204	0/0:8,0:7:21.07:0,21,747	1/1:3,0:2:1.55:4,2,0	0/1:3,0:3:0.48:0,0,40	0/0:25,0:24:57.20:0,57,2173	0/0:23,0:23:42.14:0,42,1773	0/0:23,0:22:42.14:0,42,1811	0/0:22,0:21:31.41:0,31,830	0/0:8,0:7:18.06:0,18,689	0/0:21,0:19:48.06:0,48,1883	0/0:18,0:17:51.18:0,51,2144	0/0:13,0:13:27.09:0,27,1191	0/0:10,0:8:18.06:0,18,775	0/0:10,0:9:24.08:0,24,943	0/0:5,0:5:9.03:0,9,342	0/0:17,0:15:42.14:0,42,1848	0/0:38,0:38:99:0,102,4348	0/1:6,0:13:17.01:83,0,17	1/1:8,11:16:27.44:729,27,0	1/1:3,6:11:12.04:261,12,0	1/1:14,5:16:2.99:91,3,0	0/0:9,0:9:15.05:0,15,626	0/0:14,0:13:33.11:0,33,1465	0/0:26,0:25:57.20:0,57,2513	0/0:21,0:19:51.18:0,51,2355	0/1:5,13:17:1.21:1103,0,1	1/1:8,7:15:9.03:268,9,0	0/0:14,0:12:33.11:0,33,1303
chr10	97317578	.	TTG	T	835.81	PASS	AB=0.892;AC=13;AF=0.232;AN=56;BaseQRankSum=7.306;DP=653;FS=16.247;HRun=0;HaplotypeScore=84.9004;InbreedingCoeff=-0.1206;MQ=64.32;MQ0=4;MQRankSum=1.044;QD=3.03;ReadPosRankSum=1.598;VQSLOD=0.6969;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:30:8.11:8,0,17	0/1:7,1:9:54.09:54,0,80	0/0:27,0:17:7.84:0,8,93	0/0:26,0:15:2.25:0,2,133	0/0:23,2:25:8.20:0,8,519	0/1:27,0:27:13.53:14,0,675	0/1:16,2:18:37.74:38,0,330	0/0:27,0:37:33.03:0,33,338	0/0:22,0:22:34.72:0,35,751	0/0:24,0:24:33.11:0,33,499	0/0:7,0:8:18.06:0,18,273	0/1:13,3:16:65.43:65,0,350	0/1:24,1:26:27.79:28,0,576	0/0:16,0:18:15.24:0,15,355	0/1:16,4:20:53.60:54,0,549	0/1:25,2:26:39.31:39,0,700	0/0:28,1:29:14.20:0,14,629	0/0:14,0:15:14.83:0,15,157	0/1:20,1:21:9.85:10,0,278	0/0:25,3:28:7.58:0,8,576	1/1:15,21:36:57.16:644,57,0	0/1:21,0:21:8.28:8,0,499	0/0:25,1:26:30.93:0,31,878	0/0:33,0:33:66.17:0,66,963	0/0:16,0:16:30.07:0,30,417	0/1:23,2:25:28.31:28,0,419	0/0:26,0:26:65.88:0,66,930	0/0:8,0:15:20.99:0,21,180
chr10	97318740	.	CCACACACA	C	4301.29	PASS	AB=0.684;AC=10;AF=0.179;AN=56;BaseQRankSum=11.835;DP=774;FS=2.281;HRun=0;HaplotypeScore=204.1245;InbreedingCoeff=0.7548;MQ=59.85;MQ0=7;MQRankSum=-10.435;QD=28.68;ReadPosRankSum=2.909;VQSLOD=4.7173;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:64:99:0,157,5346	0/0:9,0:9:21.05:0,21,638	0/0:37,0:21:29.01:0,29,758	0/0:41,0:24:32.99:0,33,769	0/0:24,0:25:53.75:0,54,1911	0/0:17,0:19:42.14:0,42,1502	0/0:32,0:32:66.23:0,66,2563	0/0:31,0:30:69.21:0,69,1844	0/0:19,0:23:54.18:0,54,1966	0/0:19,0:21:51.17:0,51,1730	0/0:10,0:12:33.10:0,33,1179	0/0:24,0:29:75.26:0,75,2719	0/0:27,0:29:72.25:0,72,2690	0/0:25,0:27:63.22:0,63,2501	0/0:29,0:35:75.26:0,75,2703	0/0:29,0:32:81.28:0,81,2756	0/0:34,0:35:90.31:0,90,3216	1/1:6,6:12:17.54:429,18,0	0/1:12,12:23:46.61:765,0,47	1/1:4,18:22:30.10:762,30,0	0/1:27,20:46:18.09:225,0,18	0/0:16,0:17:39.13:0,39,1236	0/0:16,0:16:39.13:0,39,1474	0/0:47,0:51:99:0,114,4252	0/0:18,0:19:51.17:0,51,1973	1/1:5,19:25:63.21:1473,63,0	1/1:7,13:20:27.05:648,27,0	0/0:17,0:20:60.21:0,60,2189
chr10	97318756	.	A	ATG	494.25	PASS	AB=0.897;AC=5;AF=0.089;AN=56;BaseQRankSum=4.349;DP=781;FS=11.228;HRun=0;HaplotypeScore=140.5435;InbreedingCoeff=-0.0984;MQ=56.42;MQ0=12;MQRankSum=-3.680;QD=3.53;ReadPosRankSum=0.021;VQSLOD=2.2461;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:69,0:69:99:0,174,3023	0/0:8,0:8:24.06:0,24,355	0/0:41,0:14:40.27:0,40,553	0/0:43,0:24:59.20:0,59,769	0/0:24,0:24:57.18:0,57,889	0/0:18,0:18:51.13:0,51,760	0/0:31,0:31:87.27:0,87,1367	0/0:31,0:30:90.29:0,90,1342	0/0:24,0:24:66.16:0,66,969	0/0:21,0:21:63.17:0,63,962	0/0:13,0:13:36.06:0,36,514	0/0:33,0:33:93.21:0,93,1364	0/0:26,0:26:75.23:0,75,1160	0/0:29,0:29:78.24:0,78,1224	0/0:31,0:31:84.22:0,84,1269	0/0:30,0:30:84.22:0,84,1270	0/0:34,0:34:99:0,102,1600	0/1:9,4:13:67.58:178,0,68	0/1:24,1:24:99:127,0,297	0/1:20,1:21:33.80:78,0,34	0/1:45,8:52:20.83:21,0,215	0/0:19,0:19:48.14:0,48,734	0/0:16,0:16:43.03:0,43,678	0/0:46,0:46:99:0,126,1965	0/0:19,0:19:57.17:0,57,892	0/1:26,2:28:99:208,0,150	0/0:15,0:14:15.54:0,16,144	0/0:20,0:20:60.14:0,60,890
chr10	97319029	.	C	CTT	2024.24	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-1.609;DP=393;FS=22.028;HRun=10;HaplotypeScore=53.6219;InbreedingCoeff=0.9165;MQ=62.41;MQ0=10;MQRankSum=0.771;QD=22.49;ReadPosRankSum=-0.583;VQSLOD=0.8876;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:34.30:0,34,226	0/0:6,0:7:17.53:0,18,162	0/0:9,0:3:2.90:0,3,18	0/0:11,0:8:7.17:0,7,40	0/0:17,0:17:26.82:0,27,247	0/0:10,0:10:27.05:0,27,273	0/0:14,0:14:30.01:0,30,298	0/0:32,0:32:50.98:0,51,513	0/0:10,0:11:26.42:0,26,251	0/0:10,0:11:26.79:0,27,256	0/0:12,0:12:27.03:0,27,275	0/0:12,0:12:27.04:0,27,275	0/0:7,0:7:8.99:0,9,91	0/0:9,0:12:22.49:0,22,201	0/0:5,0:5:9.01:0,9,92	0/0:9,0:9:20.98:0,21,202	0/0:30,0:30:54.02:0,54,549	1/1:6,8:14:20.56:278,21,0	1/1:3,10:12:30.07:417,30,0	1/1:6,7:15:31.22:339,31,0	1/1:2,7:9:21.07:313,21,0	0/0:9,0:8:15:0,15,152	0/0:12,0:12:20.99:0,21,213	0/0:11,0:10:30.06:0,30,305	0/0:23,0:23:50.87:0,51,518	1/1:6,9:14:28.85:359,29,0	1/1:3,20:22:37.66:504,38,0	0/0:13,0:13:33.07:0,33,336
chr10	97319313	.	CGTGTGTGT	C	161.80	PASS	AB=0.905;AC=6;AF=0.125;AN=48;BaseQRankSum=1.990;DP=423;FS=2.372;HRun=0;HaplotypeScore=99.6437;InbreedingCoeff=0.0045;MQ=68.89;MQ0=20;MQRankSum=-1.223;QD=2.00;ReadPosRankSum=0.488;VQSLOD=2.0097;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:22:2.90:0,3,16	0/0:4,0:4:3.01:0,3,122	./.	./.	0/0:12,0:12:9.03:0,9,275	0/0:21,0:21:21.05:0,21,600	0/0:17,0:17:9.92:0,10,267	0/0:22,0:20:1.25:0,1,3	0/0:9,0:8:9.03:0,9,308	0/0:8,0:8:12.03:0,12,207	0/0:11,0:11:2.98:0,3,22	0/1:15,1:17:64.20:64,0,173	0/0:4,0:3:6.02:0,6,162	0/0:13,0:11:9.03:0,9,275	0/0:12,0:12:12.51:0,13,319	./.	0/0:28,0:27:39.11:0,39,1073	0/0:20,0:15:3.48:0,3,39	1/1:7,0:8:3:29,3,0	./.	0/1:32,0:28:31.50:59,0,31	0/0:6,0:6:6.02:0,6,119	0/0:5,0:5:3.01:0,3,113	0/0:33,0:33:42.14:0,42,1435	0/0:6,0:5:2.20:0,2,10	0/1:11,3:14:51.96:52,0,103	0/1:8,1:9:27.94:69,0,28	0/0:11,0:11:15.05:0,15,470
chr10	97319750	.	ATG	A	443.44	PASS	AB=0.923;AC=13;AF=0.260;AN=50;BaseQRankSum=3.185;DP=562;FS=12.396;HRun=0;HaplotypeScore=74.6880;InbreedingCoeff=-0.0170;MQ=60.09;MQ0=3;MQRankSum=0.977;QD=2.03;ReadPosRankSum=2.900;VQSLOD=0.5950;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:23.79:0,24,290	0/1:6,0:6:15.36:15,0,48	./.	./.	0/0:21,0:21:12.02:0,12,144	1/1:15,0:18:8.67:52,9,0	0/1:20,3:23:41.48:41,0,209	0/0:30,0:30:16.22:0,16,165	0/1:18,1:19:17.57:18,0,158	0/0:23,0:23:9.03:0,9,134	0/1:9,1:11:34.68:38,0,35	0/1:22,3:25:47.20:47,0,159	0/0:15,0:15:15.03:0,15,188	0/0:13,0:13:12.04:0,12,173	1/1:9,8:18:23.90:242,24,0	0/0:16,0:16:12.03:0,12,157	0/1:28,0:30:13.50:13,0,237	0/0:19,0:19:27.03:0,27,267	0/0:20,0:19:12.01:0,12,130	./.	0/0:47,0:47:18.47:0,18,199	0/1:22,2:24:37.36:37,0,265	0/0:10,0:10:4.70:0,5,107	0/1:28,4:32:69.87:70,0,400	0/1:11,0:11:20.58:21,0,121	0/0:25,0:24:24.03:0,24,277	0/0:13,0:11:5.56:0,6,62	0/0:4,0:4:3.01:0,3,45
chr10	97320263	.	A	AATC	25243.48	PASS	AB=0.964;AC=54;AF=0.964;AN=56;BaseQRankSum=-2.607;DP=499;FS=0.000;HRun=0;HaplotypeScore=299.5945;InbreedingCoeff=-0.0418;MQ=53.93;MQ0=0;MQRankSum=-2.024;QD=50.59;ReadPosRankSum=0.376;VQSLOD=3.8187;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:33.11:660,33,0	1/1:9,0:9:27.09:551,27,0	0/1:11,0:10:40.02:108,0,40	0/1:17,0:10:6.48:101,0,6	1/1:35,0:35:80.98:1564,81,0	1/1:17,0:17:48.12:1014,48,0	1/1:21,0:21:50.95:1046,51,0	1/1:19,0:19:56.53:926,57,0	1/1:31,0:31:90.28:1837,90,0	1/1:28,0:29:68.48:1299,68,0	1/1:17,0:17:39.09:857,39,0	1/1:21,0:21:54.18:1139,54,0	1/1:14,1:16:42.14:879,42,0	1/1:19,0:18:42.62:910,43,0	1/1:15,0:15:42.14:894,42,0	1/1:16,0:16:44.89:900,45,0	1/1:12,0:12:33.32:604,33,0	1/1:1,0:1:3.01:57,3,0	1/1:7,0:7:18.06:317,18,0	1/1:25,1:26:72.25:1597,72,0	1/1:6,0:6:12.04:251,12,0	1/1:34,1:35:99:2315,102,0	1/1:19,1:20:50.91:1079,51,0	1/1:14,1:15:18.06:342,18,0	1/1:31,1:32:96.32:2111,96,0	1/1:17,0:17:47.62:793,48,0	1/1:10,0:10:30.10:583,30,0	1/1:9,0:9:27.09:509,27,0
chr10	97320267	.	CT	C	1635.84	PASS	AB=0.968;AC=22;AF=0.393;AN=56;BaseQRankSum=-4.969;DP=488;FS=107.149;HRun=4;HaplotypeScore=367.8390;InbreedingCoeff=0.1918;MQ=51.38;MQ0=2;MQRankSum=-2.074;QD=6.62;ReadPosRankSum=10.518;VQSLOD=-0.1407;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:2.92:0,3,53	0/1:9,0:9:18.66:54,0,19	0/0:10,0:6:8.96:0,9,94	0/1:21,0:12:4.97:10,0,5	0/0:32,2:34:24.55:0,25,103	0/0:15,0:16:7.93:0,8,75	0/1:19,1:20:24.71:25,0,63	1/1:17,2:19:45.53:309,46,0	0/0:29,0:29:4.55:0,5,153	1/1:22,2:24:68.18:479,68,0	0/0:17,0:17:8.11:0,8,37	0/1:21,0:21:6.13:6,0,72	0/1:14,1:15:28.28:50,0,28	0/1:17,2:18:13.64:14,0,55	0/0:15,0:15:32.18:0,32,129	0/1:16,0:16:17.34:68,0,17	0/1:12,0:12:18.96:60,0,19	1/1:1,0:1:2.96:19,3,0	1/1:6,1:7:14.83:111,15,0	0/1:25,1:26:41.69:62,0,42	0/0:6,0:6:5.35:0,5,21	0/0:33,1:34:34.91:0,35,141	0/0:18,2:20:15.24:0,15,61	0/0:15,0:15:10.86:0,11,42	0/0:31,0:31:7.30:0,7,76	1/1:15,1:16:41.48:287,41,0	0/1:10,0:10:4.54:91,0,5	1/1:9,0:9:26.63:172,27,0
chr10	97320268	.	T	TC	11213.47	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-1.265;DP=500;FS=0.000;HRun=1;HaplotypeScore=355.6466;InbreedingCoeff=0.5503;MQ=49.69;MQ0=2;MQRankSum=-2.568;QD=22.88;ReadPosRankSum=1.932;VQSLOD=3.3449;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:31.87:224,32,0	1/1:0,9:9:26.84:291,27,0	0/0:9,0:6:7.73:0,8,59	0/1:23,0:12:2.82:29,0,3	1/1:5,31:36:66.55:490,67,0	1/1:3,14:17:47.42:339,47,0	1/1:2,19:21:43.54:379,44,0	1/1:3,13:16:48.12:709,48,0	1/1:1,28:29:85.88:670,86,0	1/1:3,21:24:72.22:1094,72,0	1/1:1,16:17:35.28:299,35,0	1/1:0,20:20:49.80:411,50,0	1/1:6,12:18:41.53:373,42,0	1/1:4,16:19:39.70:348,40,0	1/1:1,15:16:41.08:266,41,0	1/1:3,15:18:44.53:452,45,0	1/1:0,11:11:29.78:335,30,0	1/1:0,1:1:3.01:48,3,0	1/1:1,4:5:15.05:227,15,0	1/1:6,24:30:71.37:699,71,0	1/1:0,6:6:11.78:71,12,0	1/1:7,31:38:96.88:788,97,0	1/1:5,16:21:46.32:339,46,0	1/1:1,13:14:14.26:84,14,0	1/1:2,30:32:92.26:804,92,0	1/1:2,13:15:42.14:654,42,0	1/1:0,10:10:29.89:362,30,0	1/1:1,9:10:27.09:429,27,0
chr10	97320282	.	C	CA	5839.23	PASS	AB=0.549;AC=49;AF=0.875;AN=56;BaseQRankSum=-3.161;DP=570;FS=4.858;HRun=0;HaplotypeScore=384.4634;InbreedingCoeff=0.4676;MQ=50.87;MQ0=4;MQRankSum=-4.347;QD=11.32;ReadPosRankSum=2.533;VQSLOD=4.3343;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,12:13:2.89:48,3,0	1/1:1,8:9:6.02:96,6,0	0/0:17,0:8:11.80:0,12,198	0/0:35,0:16:16.76:0,17,130	1/1:2,34:37:0.01:1,0,0	1/1:0,18:18:5.69:93,6,0	1/1:2,21:23:18.36:286,18,0	1/1:5,15:20:54.18:862,54,0	1/1:1,31:32:9.03:143,9,0	1/1:3,24:28:65.15:1222,65,0	0/1:3,17:20:0:0,0,0	1/1:1,17:18:5.85:95,6,0	1/1:0,16:16:24.40:356,24,0	1/1:3,24:26:5.78:95,6,0	1/1:1,20:21:0.39:1,0,0	1/1:2,16:19:23.62:346,24,0	1/1:0,8:8:12.04:192,12,0	1/1:0,1:1:3.01:48,3,0	1/1:2,3:5:4.30:137,4,0	1/1:5,26:31:16.71:288,17,0	1/1:1,3:4:3.01:45,3,0	0/1:3,35:38:0.42:0,0,0	1/1:2,22:24:0.05:1,0,0	0/1:5,11:17:0.17:0,0,0	1/1:3,33:36:2.79:40,3,0	1/1:5,15:20:30.88:668,31,0	1/1:7,10:17:2.14:220,2,0	1/1:2,11:14:36.08:554,36,0
chr10	97320317	.	CTCTTA	C	1357.47	PASS	AB=0.886;AC=11;AF=0.204;AN=54;BaseQRankSum=2.155;DP=651;FS=6.423;HRun=0;HaplotypeScore=425.7645;InbreedingCoeff=-0.0979;MQ=51.49;MQ0=5;MQRankSum=-1.164;QD=5.03;ReadPosRankSum=-3.744;VQSLOD=0.2770;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,1:20:36.44:36,0,55	0/0:12,0:12:4.86:0,5,240	0/0:20,0:10:8.11:0,8,161	0/0:50,0:23:20.36:0,20,304	0/1:35,0:35:0.23:0,0,1	0/0:20,0:20:4.68:0,5,120	0/0:18,0:18:12.42:0,12,100	0/0:31,0:31:37.78:0,38,713	0/1:26,0:26:3.90:4,0,184	0/0:30,0:30:72.70:0,73,1325	0/0:20,0:20:2.92:0,3,13	0/0:19,0:19:15.25:0,15,198	0/0:18,0:18:24.40:0,24,374	0/0:29,0:28:12.07:0,12,178	0/1:25,0:25:13.86:14,0,54	0/0:24,0:24:16.95:0,17,401	0/0:7,0:7:9.01:0,9,146	./.	0/1:9,5:13:65.18:377,0,65	0/1:30,6:35:69.64:127,0,70	0/0:2,1:3:2.90:0,3,62	1/1:37,0:37:0.17:0,0,0	0/0:28,0:28:0.67:0,1,1	0/1:17,3:20:11.45:11,0,57	0/0:30,0:30:3.66:0,4,64	0/1:18,8:25:99:518,0,452	0/1:23,8:31:99:392,0,269	0/0:18,0:18:33.02:0,33,505
chr10	97320320	.	T	TC	7904.82	PASS	AB=0.512;AC=43;AF=0.796;AN=54;BaseQRankSum=-2.508;DP=627;FS=3.834;HRun=1;HaplotypeScore=357.2551;InbreedingCoeff=0.4842;MQ=54.05;MQ0=6;MQRankSum=-4.695;QD=17.34;ReadPosRankSum=3.484;VQSLOD=3.8453;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,15:20:4.04:69,4,0	1/1:0,12:12:18.06:287,18,0	0/0:20,1:10:8.01:0,8,101	0/0:51,0:26:5.35:0,5,225	0/0:2,31:33:0.34:0,0,1	1/1:2,14:16:9.03:135,9,0	1/1:3,16:19:11.38:190,11,0	1/1:6,26:32:81.27:1255,81,0	1/1:2,21:24:21.07:291,21,0	1/1:3,28:30:84.28:1331,84,0	1/1:1,16:17:2.75:47,3,0	1/1:5,15:20:13.99:236,14,0	1/1:1,16:17:27.29:418,27,0	1/1:1,26:26:7.37:140,7,0	0/1:1,21:22:0.88:43,0,1	1/1:2,22:24:36.58:555,37,0	1/1:1,4:5:9.03:143,9,0	./.	1/1:5,8:12:35.54:445,36,0	1/1:7,28:34:16.76:257,17,0	1/1:2,1:3:2.91:48,3,0	0/0:1,32:33:1.09:0,1,3	0/0:2,25:27:1.27:0,1,4	1/1:9,10:19:1.36:46,1,0	1/1:2,25:27:2.68:48,3,0	1/1:12,16:26:67.70:849,68,0	1/1:8,22:30:44.14:592,44,0	1/1:0,15:15:30.07:478,30,0
chr10	97320350	.	CTGA	C	735.49	PASS	AB=0.923;AC=20;AF=0.357;AN=56;BaseQRankSum=1.315;DP=641;FS=7.917;HRun=0;HaplotypeScore=328.7939;InbreedingCoeff=-0.1498;MQ=77.06;MQ0=9;MQRankSum=-1.806;QD=2.14;ReadPosRankSum=-4.389;VQSLOD=0.1989;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:22:0.69:0,1,32	0/0:9,0:9:16.86:0,17,178	0/0:40,0:21:34.78:0,35,350	0/0:101,0:59:38.03:0,38,752	0/1:25,0:25:0.49:1,0,0	0/1:18,0:18:52.95:63,0,53	0/0:16,0:16:1.19:0,1,67	0/0:24,0:24:41.21:0,41,683	0/0:14,0:14:15.48:0,15,144	0/0:30,0:29:46.92:0,47,781	0/0:16,0:16:2.48:0,2,32	0/1:17,0:17:29.76:30,0,237	0/1:22,0:22:8:8,0,407	0/1:24,0:24:0.24:0,0,134	0/1:21,0:21:10.21:10,0,27	0/0:18,0:18:32.66:0,33,352	0/0:5,0:5:6.46:0,6,68	0/1:2,0:2:8.48:8,0,23	0/1:18,3:20:99:130,0,268	0/1:12,13:24:48.63:49,0,91	0/1:5,0:5:0:0,0,0	1/1:27,0:27:1.26:2,1,0	1/1:24,0:24:0.63:1,1,0	0/1:21,0:21:1.01:1,0,43	1/1:24,0:24:0.35:1,0,0	0/1:13,10:21:99:266,0,315	0/1:16,13:29:99:278,0,188	0/1:16,0:16:14.63:15,0,221
chr10	97320353	.	A	AC	7766.75	PASS	AB=0.523;AC=45;AF=0.804;AN=56;BaseQRankSum=-4.187;DP=619;FS=12.445;HRun=0;HaplotypeScore=285.0446;InbreedingCoeff=0.5728;MQ=78.82;MQ0=9;MQRankSum=-6.424;QD=16.35;ReadPosRankSum=4.643;VQSLOD=3.0870;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,16:20:2.16:24,2,0	1/1:0,8:8:15.05:239,15,0	0/0:41,0:23:14.91:0,15,295	0/0:95,6:58:52.75:0,53,638	0/1:2,23:25:0.23:1,0,0	1/1:1,16:17:15.05:239,15,0	1/1:2,14:16:15:203,15,0	1/1:1,20:21:54.18:862,54,0	1/1:0,13:13:18.06:287,18,0	1/1:2,25:26:75.25:1184,75,0	1/1:2,16:18:2.69:47,3,0	1/1:0,16:16:30.10:478,30,0	1/1:0,21:21:51.17:811,51,0	1/1:0,22:22:17.24:276,17,0	0/1:1,19:20:0.93:43,0,1	1/1:1,17:18:33.11:525,33,0	1/1:2,5:7:8.99:116,9,0	1/1:1,1:2:3.90:49,4,0	1/1:4,15:18:38.94:679,39,0	1/1:14,11:24:17.84:256,18,0	0/1:0,4:4:0.10:0,0,0	0/1:0,25:25:0.47:0,0,1	0/1:1,22:23:0.09:0,0,1	0/1:6,13:19:0:0,0,1	0/1:2,21:23:0.02:0,0,0	1/1:10,11:19:25.92:531,26,0	1/1:16,13:30:34.42:446,34,0	1/1:2,13:15:30.10:468,30,0
chr10	97320377	.	GT	G	3981.76	PASS	AB=0.827;AC=40;AF=0.714;AN=56;BaseQRankSum=-5.051;DP=503;FS=1.855;HRun=4;HaplotypeScore=260.3020;InbreedingCoeff=0.4911;MQ=76.63;MQ0=3;MQRankSum=-2.121;QD=12.10;ReadPosRankSum=2.175;VQSLOD=1.4774;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:1,19:20:1.89:0,2,3	1/1:1,8:9:9.03:108,9,0	0/0:25,0:19:15.71:0,16,236	0/0:56,3:40:9.24:0,9,167	0/0:2,18:20:1.03:0,1,2	1/1:2,15:17:10.64:121,11,0	1/1:2,17:19:11.62:143,12,0	1/1:4,11:15:33.10:396,33,0	1/1:2,11:13:14.93:176,15,0	1/1:2,18:19:51.16:611,51,0	0/0:3,17:20:1.88:0,2,3	1/1:1,12:13:17.94:215,18,0	1/1:1,18:19:42.07:502,42,0	1/1:3,10:13:11.79:143,12,0	1/1:3,19:22:7.35:64,7,0	1/1:4,16:20:33.08:384,33,0	1/1:0,8:8:12.04:144,12,0	1/1:3,0:3:5.02:14,5,0	0/1:4,0:4:0.46:0,0,9	1/1:6,7:16:1.30:12,1,0	0/0:5,0:5:1.88:0,2,3	1/1:4,16:20:2.65:21,3,0	1/1:1,20:21:2.65:23,3,0	1/1:9,8:17:2.75:24,3,0	0/0:1,18:19:1.41:0,1,2	0/1:8,7:15:7.63:151,0,8	1/1:11,9:24:4.74:158,5,0	1/1:1,18:19:48.14:571,48,0
chr10	97320378	.	T	TC	1023.80	PASS	AB=0.962;AC=14;AF=0.250;AN=56;BaseQRankSum=5.226;DP=507;FS=6.988;HRun=0;HaplotypeScore=272.6360;InbreedingCoeff=0.4724;MQ=74.95;MQ0=3;MQRankSum=-0.473;QD=5.88;ReadPosRankSum=-0.644;VQSLOD=2.0767;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:1.41:0,1,4	0/0:9,0:9:17.95:0,18,94	0/1:24,0:18:37.95:38,0,178	0/1:61,0:39:8.95:9,0,116	0/0:21,0:21:1.03:0,1,2	0/0:19,0:19:14.20:0,14,72	0/0:23,0:23:3.41:0,3,49	0/0:14,0:14:31.45:0,31,136	0/0:14,0:14:0.38:0,0,45	0/0:21,0:20:49.86:0,50,206	0/0:20,0:20:4.24:0,4,17	0/0:13,0:13:24.49:0,24,121	0/0:20,0:20:39.22:0,39,159	0/0:14,0:14:17.44:0,17,100	0/0:20,0:20:6.04:0,6,33	0/0:21,0:21:32.30:0,32,153	0/1:10,0:10:1:1,0,36	1/1:0,3:3:6.02:89,6,0	1/1:1,3:4:11.91:150,12,0	1/1:10,5:15:5.75:65,6,0	0/0:0,5:5:1.89:0,2,3	0/0:19,0:19:0.47:0,0,2	0/0:21,0:21:0.94:0,1,3	0/1:15,2:17:0.02:0,0,1	0/0:20,0:20:0.47:0,0,2	1/1:9,6:13:24.77:379,25,0	1/1:13,9:22:33.02:444,33,0	0/0:19,0:19:11.96:0,12,115
chr10	97320384	.	G	GAC	818.13	PASS	AB=0.909;AC=9;AF=0.161;AN=56;BaseQRankSum=7.712;DP=533;FS=23.984;HRun=0;HaplotypeScore=286.7384;InbreedingCoeff=0.6093;MQ=71.71;MQ0=3;MQRankSum=-0.974;QD=10.36;ReadPosRankSum=2.638;VQSLOD=1.6107;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:40.18:0,40,580	0/0:9,0:9:15.05:0,15,242	0/0:21,0:13:18.44:0,18,180	0/0:58,0:35:5.93:0,6,93	0/0:20,0:20:30.10:0,30,483	0/0:21,0:21:34:0,34,537	0/0:24,0:24:47.37:0,47,734	0/0:12,0:12:33.07:0,33,507	0/0:15,0:15:36.12:0,36,566	0/0:23,0:22:60.13:0,60,905	0/0:18,0:18:34:0,34,533	0/0:15,0:15:24.08:0,24,387	0/0:24,0:24:54.18:0,54,872	0/0:14,0:14:27.09:0,27,432	0/0:23,0:23:51.17:0,51,822	0/0:23,0:23:63.21:0,63,1005	0/0:12,0:12:18.95:0,19,293	1/1:2,2:4:8.90:121,9,0	0/1:6,0:6:18.69:123,0,19	1/1:17,2:20:5.85:94,6,0	0/1:5,1:6:0.15:0,0,0	0/0:19,0:19:48.16:0,48,774	0/0:21,0:21:42.14:0,42,679	0/0:19,0:19:15.05:0,15,242	0/0:24,0:24:63.22:0,63,1019	0/1:17,2:18:99:314,0,121	1/1:18,5:23:35.20:308,35,0	0/0:19,0:19:54.01:0,54,785
chr10	97320386	.	C	CTG	729.87	PASS	AB=0.740;AC=9;AF=0.161;AN=56;BaseQRankSum=8.432;DP=537;FS=32.687;HRun=0;HaplotypeScore=286.2936;InbreedingCoeff=0.6260;MQ=70.16;MQ0=3;MQRankSum=-1.207;QD=9.48;ReadPosRankSum=2.411;VQSLOD=1.5987;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:39.71:0,40,549	0/0:10,0:10:18.05:0,18,253	0/0:20,0:13:23.22:0,23,239	0/0:54,0:32:14.71:0,15,127	0/0:20,0:20:30.10:0,30,457	0/0:22,0:22:36.95:0,37,531	0/0:25,0:25:48.15:0,48,710	0/0:12,0:12:33.07:0,33,478	0/0:17,0:17:42.11:0,42,595	0/0:21,0:20:54.17:0,54,811	0/0:17,0:17:33.58:0,34,503	0/0:17,0:17:27.07:0,27,388	0/0:25,0:25:57.13:0,57,840	0/0:14,0:14:27.09:0,27,408	0/0:23,0:23:54.18:0,54,821	0/0:23,0:23:63.21:0,63,948	0/0:12,0:12:18.95:0,19,276	1/1:3,1:4:8.81:85,9,0	0/1:4,2:6:28.97:122,0,29	1/1:14,2:19:5.60:31,6,0	0/1:2,4:6:0.16:0,0,0	0/0:19,0:19:48.16:0,48,729	0/0:22,0:22:42.13:0,42,640	0/0:20,0:23:18.02:0,18,247	0/0:24,0:24:66.21:0,66,983	0/1:16,3:18:65.79:306,0,66	1/1:9,5:22:30.76:328,31,0	0/0:19,0:19:45.14:0,45,686
chr10	97320402	.	GT	G	7887.71	PASS	AB=0.929;AC=51;AF=0.911;AN=56;BaseQRankSum=-3.940;DP=508;FS=19.394;HRun=4;HaplotypeScore=203.9766;InbreedingCoeff=0.4999;MQ=60.31;MQ0=1;MQRankSum=-2.840;QD=16.57;ReadPosRankSum=3.202;VQSLOD=2.6417;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,16:21:17.43:181,17,0	1/1:0,8:8:18.05:207,18,0	0/1:12,1:8:10.11:10,0,123	0/0:26,0:16:5.13:0,5,46	1/1:1,17:18:14.94:180,15,0	1/1:0,20:20:33.10:396,33,0	1/1:3,24:27:20.43:251,20,0	1/1:2,14:16:39.11:468,39,0	1/1:0,20:20:42.13:503,42,0	1/1:5,23:27:63.19:752,63,0	1/1:1,20:21:31.74:393,32,0	1/1:0,16:16:12.03:144,12,0	1/1:1,24:25:36.06:414,36,0	1/1:1,15:15:27.08:324,27,0	1/1:2,20:22:18.05:216,18,0	1/1:4,23:27:50.74:611,51,0	1/1:1,14:15:11.89:143,12,0	1/1:0,5:5:15.05:180,15,0	1/1:0,4:4:12.04:142,12,0	1/1:0,12:15:3.01:35,3,0	0/0:0,5:5:0.88:0,1,2	1/1:2,22:24:36.10:430,36,0	1/1:2,24:26:31.97:394,32,0	1/1:2,25:28:26.88:323,27,0	1/1:0,23:23:27.08:324,27,0	1/1:1,7:8:21.53:243,22,0	1/1:1,7:15:19.93:156,20,0	1/1:0,15:15:39.12:467,39,0
chr10	97320435	.	CTCTCTG	C	815.95	PASS	AB=0.760;AC=9;AF=0.161;AN=56;BaseQRankSum=7.524;DP=592;FS=3.912;HRun=0;HaplotypeScore=232.8369;InbreedingCoeff=0.7481;MQ=58.08;MQ0=1;MQRankSum=-5.008;QD=11.66;ReadPosRankSum=-1.813;VQSLOD=2.7203;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:51.16:0,51,932	0/0:14,0:14:33.11:0,33,948	0/0:21,0:16:44.33:0,44,1202	0/0:27,0:19:40.63:0,41,934	0/0:17,0:17:39.11:0,39,1162	0/0:25,0:25:60.21:0,60,1903	0/0:36,0:36:54.19:0,54,1612	0/0:31,0:31:87.19:0,87,2000	0/0:24,0:24:60.21:0,60,2013	0/0:29,0:28:78.26:0,78,2380	0/0:21,0:21:54.19:0,54,1667	0/0:15,0:15:33.11:0,33,1075	0/0:20,0:20:42.14:0,42,1441	0/0:29,0:28:63.20:0,63,1917	0/0:21,0:21:36.12:0,36,1222	0/0:24,0:24:62.17:0,62,2137	0/0:23,0:23:54.19:0,54,1484	0/0:8,0:8:23.67:0,24,629	1/1:12,1:13:0.77:94,1,0	1/1:4,10:14:27.84:210,28,0	1/1:10,2:12:6.54:51,7,0	0/0:22,0:22:60.21:0,60,1953	0/0:22,0:22:54.03:0,54,1735	0/0:32,0:32:69.24:0,69,2378	0/0:18,0:18:39.13:0,39,1205	0/1:13,6:19:70.80:390,0,71	1/1:7,5:12:8.45:215,8,0	0/0:13,0:13:36.12:0,36,1211
chr10	97320437	.	CTCTG	C	1459.44	PASS	AB=0.613;AC=9;AF=0.161;AN=56;BaseQRankSum=5.087;DP=605;FS=2.654;HRun=0;HaplotypeScore=213.4494;InbreedingCoeff=0.8754;MQ=62.44;MQ0=1;MQRankSum=-4.339;QD=20.56;ReadPosRankSum=-2.992;VQSLOD=3.0684;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:49.64:0,50,372	0/0:14,0:14:31.66:0,32,636	0/0:24,0:19:50.32:0,50,982	0/0:29,0:21:34.24:0,34,718	0/0:17,0:17:42.09:0,42,846	0/0:24,0:24:60.21:0,60,1388	0/0:38,0:38:59.85:0,60,1176	0/0:31,0:31:90.09:0,90,1388	0/0:24,0:24:60.21:0,60,1492	0/0:29,0:28:78.22:0,78,1777	0/0:21,0:21:54.17:0,54,1168	0/0:16,0:16:36.10:0,36,821	0/0:20,0:20:45.14:0,45,1068	0/0:30,0:29:66.19:0,66,1438	0/0:21,0:21:36.12:0,36,895	0/0:25,0:25:65.30:0,65,1560	0/0:23,0:23:54.11:0,54,1055	0/0:9,0:9:26.68:0,27,463	1/1:13,0:13:32.65:354,33,0	1/1:15,0:15:30.07:333,30,0	1/1:12,0:12:6.61:74,7,0	0/0:22,0:22:60.19:0,60,1439	0/0:22,0:22:54.19:0,54,1258	0/0:32,0:32:69.24:0,69,1817	0/0:16,0:16:39.13:0,39,877	0/1:7,12:19:4.95:564,0,5	1/1:12,0:12:23.91:295,24,0	0/0:16,0:16:45.04:0,45,911
chr10	97321314	.	CGG	C	2509.91	PASS	AB=0.958;AC=14;AF=0.250;AN=56;BaseQRankSum=2.315;DP=412;FS=3.549;HRun=10;HaplotypeScore=68.9973;InbreedingCoeff=0.7852;MQ=72.63;MQ0=1;MQRankSum=0.334;QD=19.46;ReadPosRankSum=4.509;VQSLOD=2.4943;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:26:57.14:630,57,0	0/0:8,0:8:19.29:0,19,261	0/0:15,0:10:18.68:0,19,248	0/0:10,0:10:23.75:0,24,285	0/0:15,0:15:21.29:0,21,241	0/1:11,0:11:3.77:4,0,269	0/0:18,0:20:42.35:0,42,545	0/0:17,0:17:21.06:0,21,312	0/0:15,0:15:39.11:0,39,546	0/0:17,0:17:28.85:0,29,329	0/0:6,0:6:3.48:0,3,48	0/0:13,0:13:33.01:0,33,436	0/0:5,0:5:9.50:0,9,103	0/0:11,0:11:26.59:0,27,323	0/0:9,0:9:18.05:0,18,227	0/1:10,1:11:5.70:6,0,263	0/0:28,0:31:75.73:0,76,954	0/0:7,0:26:33.33:0,33,115	1/1:4,18:22:57.13:623,57,0	1/1:2,3:5:8.34:94,8,0	1/1:1,20:21:51.14:568,51,0	0/0:10,0:10:18.05:0,18,225	0/0:13,0:13:24.27:0,24,299	0/0:22,0:24:59.34:0,59,766	0/0:12,0:12:29.88:0,30,410	1/1:3,11:14:16.27:343,16,0	1/1:5,14:19:39.09:426,39,0	0/0:5,0:5:9.01:0,9,114
chr10	97322268	.	CCA	C	456.04	PASS	AB=0.897;AC=11;AF=0.220;AN=50;BaseQRankSum=4.322;DP=702;FS=3.250;HRun=0;HaplotypeScore=105.6308;InbreedingCoeff=-0.0229;MQ=62.51;MQ0=12;MQRankSum=0.356;QD=1.92;ReadPosRankSum=0.974;VQSLOD=2.1419;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,10:30:29.91:314,30,0	0/1:11,1:13:23.34:23,0,222	./.	./.	0/1:20,2:22:21.41:21,0,517	0/0:9,0:18:17.73:0,18,256	0/1:29,3:33:38.54:39,0,432	./.	0/0:33,0:32:29.94:0,30,693	0/0:14,0:22:42.95:0,43,472	0/1:15,2:17:75.30:75,0,115	0/1:26,3:30:2.15:2,0,533	0/0:21,0:23:30.06:0,30,387	0/1:26,3:29:48.64:49,0,575	0/1:22,3:25:63.96:64,0,316	0/0:28,0:29:40.05:0,40,735	0/0:18,0:18:21.04:0,21,291	0/0:18,0:23:17.98:0,18,183	0/0:15,0:14:12.50:0,13,149	0/0:14,0:22:8.70:0,9,37	0/0:25,0:31:14.64:0,15,145	0/0:24,3:27:32.86:0,33,482	0/1:24,3:28:0.18:0,0,401	0/0:30,1:32:5.80:0,6,444	0/0:24,2:26:20.86:0,21,674	0/0:14,0:25:49.71:0,50,391	0/0:12,0:20:11.24:0,11,113	0/1:10,1:11:6.19:6,0,331
chr10	97323360	.	T	TG	209.48	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-2.043;DP=219;FS=3.052;HRun=7;HaplotypeScore=27.0668;InbreedingCoeff=0.6243;MQ=82.01;MQ0=0;MQRankSum=0.570;QD=13.97;ReadPosRankSum=0.955;VQSLOD=1.8652;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,7:11:27.06:303,27,0	0/0:3,0:3:9.01:0,9,87	0/0:7,0:7:15.48:0,15,140	0/0:8,0:8:22.26:0,22,198	0/0:7,0:7:15.02:0,15,145	0/0:11,0:11:24.03:0,24,231	0/0:10,0:10:12.01:0,12,116	0/0:9,0:9:18.02:0,18,174	0/0:9,0:9:21.02:0,21,197	0/0:6,0:6:18.02:0,18,169	0/0:6,0:6:18.01:0,18,168	0/0:9,0:9:21.02:0,21,203	0/0:5,0:5:12.02:0,12,116	0/0:8,0:8:14.99:0,15,134	0/0:10,0:10:15:0,15,144	0/1:4,0:4:0:0,0,0	0/0:2,0:2:5.99:0,6,52	0/0:6,0:6:11.83:0,12,115	0/0:9,0:10:21.02:0,21,199	0/0:8,0:8:15.02:0,15,144	0/0:17,0:17:39.02:0,39,365	0/0:8,0:8:12.01:0,12,116	0/0:9,0:9:24.04:0,24,232	0/0:5,0:5:6:0,6,58	0/0:8,0:8:21.02:0,21,197	0/0:5,0:5:12.02:0,12,116	0/0:11,0:11:24.02:0,24,230	0/0:7,0:7:15.02:0,15,144
chr10	97323700	.	TTCTCTC	T	589.99	PASS	AB=1.000;AC=16;AF=0.320;AN=50;BaseQRankSum=5.125;DP=569;FS=0.000;HRun=0;HaplotypeScore=133.0608;InbreedingCoeff=0.0963;MQ=67.95;MQ0=26;MQRankSum=-1.775;QD=3.33;ReadPosRankSum=0.901;VQSLOD=2.4343;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,13:25:3.46:0,3,24	0/0:8,0:8:9.03:0,9,160	./.	0/0:49,0:31:1.72:0,2,4	0/1:14,0:12:50.63:51,0,103	0/1:20,0:18:1.84:2,0,280	0/0:35,0:33:24.94:0,25,445	./.	0/0:32,0:31:38.98:0,39,807	0/1:21,0:20:69.33:69,0,421	0/1:10,0:10:13.37:13,0,124	0/1:16,0:16:24.08:24,0,541	0/1:20,0:19:55.31:55,0,415	0/0:14,0:14:4.34:0,4,25	0/0:29,0:28:27.08:0,27,565	0/0:23,0:22:7.90:0,8,419	0/0:18,0:17:24.08:0,24,609	./.	1/1:14,0:15:6.02:84,6,0	1/1:4,0:7:3.01:43,3,0	0/0:15,0:10:0.94:0,1,1	0/0:25,0:24:27.45:0,27,460	0/0:9,0:8:3.48:0,3,75	0/0:31,0:27:0.63:0,1,759	0/1:14,0:14:13.32:13,0,84	1/1:9,0:16:15.05:209,15,0	1/1:7,0:10:9.03:126,9,0	0/1:11,0:9:47.77:48,0,75
chr10	97323890	.	A	AAC	548.25	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=3.742;DP=728;FS=6.683;HRun=0;HaplotypeScore=98.8783;InbreedingCoeff=0.8284;MQ=46.69;MQ0=85;MQRankSum=0.924;QD=21.09;ReadPosRankSum=-2.215;VQSLOD=3.3608;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,11:24:42.14:643,42,0	0/0:8,0:8:21.01:0,21,234	0/0:43,0:2:2.88:0,3,34	./.	0/0:22,0:22:60.07:0,60,714	0/0:19,0:19:50.53:0,51,565	0/0:58,0:57:68.62:0,69,1227	0/0:43,0:20:51.14:0,51,612	0/0:33,0:32:78.25:0,78,975	0/0:24,0:21:40.31:0,40,459	0/0:10,0:10:23.94:0,24,276	0/0:31,0:30:54.10:0,54,657	0/0:37,0:33:42.11:0,42,504	0/0:25,0:22:35.71:0,36,449	0/0:17,0:16:30.96:0,31,352	0/0:34,0:34:84.26:0,84,1035	0/0:30,0:27:53.54:0,54,660	0/0:8,0:7:21.03:0,21,281	0/0:27,0:17:40.62:0,41,453	0/0:14,0:13:35.96:0,36,412	0/0:30,0:22:32.78:0,33,395	0/0:30,0:30:75.19:0,75,908	0/0:18,0:18:45.14:0,45,556	0/0:31,0:29:72.03:0,72,847	0/0:21,0:22:44.97:0,45,523	0/0:18,0:17:51.11:0,51,635	0/0:24,0:22:48.09:0,48,593	0/0:10,0:9:15.05:0,15,188
chr10	97323918	.	TACAC	T	3650.82	PASS	AB=0.649;AC=11;AF=0.196;AN=56;BaseQRankSum=8.962;DP=699;FS=18.376;HRun=0;HaplotypeScore=115.9125;InbreedingCoeff=0.8550;MQ=51.02;MQ0=33;MQRankSum=-3.410;QD=26.26;ReadPosRankSum=-1.129;VQSLOD=2.0452;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:47.70:0,48,1131	0/0:8,0:8:12.04:0,12,301	0/0:33,0:11:26.62:0,27,400	0/0:33,0:10:30.07:0,30,508	0/0:24,0:24:60.16:0,60,1340	0/0:25,0:25:54.18:0,54,1232	0/0:53,0:51:77.58:0,78,2017	0/0:39,0:25:54.16:0,54,1179	0/0:33,0:32:78.24:0,78,1732	0/0:25,0:25:48.08:0,48,874	0/0:10,0:10:24.08:0,24,583	0/0:25,0:25:50.74:0,51,1099	0/0:26,0:24:42.14:0,42,984	0/0:24,0:22:45.15:0,45,984	0/0:18,0:17:30.44:0,30,573	0/0:24,0:24:54.18:0,54,1254	0/0:27,0:25:48.16:0,48,1117	1/1:6,6:11:30:441,30,0	1/1:25,4:24:38.55:498,39,0	1/1:10,9:18:33.53:533,34,0	1/1:16,12:23:35.82:579,36,0	0/0:32,0:32:84.29:0,84,1898	0/0:18,0:19:7.10:0,7,910	0/0:32,0:29:76.50:0,77,1791	0/0:19,0:19:48.16:0,48,1093	0/1:11,12:21:5.59:714,0,6	1/1:13,14:26:57.16:885,57,0	0/0:3,0:3:3.01:0,3,75
chr10	97323940	.	A	AAG	3722.87	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.458;DP=646;FS=8.494;HRun=0;HaplotypeScore=101.0022;InbreedingCoeff=0.9792;MQ=57.99;MQ0=15;MQRankSum=-3.342;QD=25.15;ReadPosRankSum=-1.700;VQSLOD=3.9745;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:66.71:459,67,0	0/0:5,0:5:12.03:0,12,141	0/0:51,0:23:43.25:0,43,422	0/0:32,0:14:32.85:0,33,335	0/0:22,0:22:43.92:0,44,515	0/0:27,0:27:66.20:0,66,831	0/0:40,0:40:93.18:0,93,1088	0/0:26,0:24:39.03:0,39,409	0/0:25,0:25:51.43:0,51,492	0/0:19,0:19:48.15:0,48,604	0/0:10,0:10:21.05:0,21,245	0/0:18,0:18:37.32:0,37,439	0/0:23,0:22:63.10:0,63,734	0/0:19,0:19:42.08:0,42,507	0/0:19,0:19:36.04:0,36,405	0/0:22,0:22:48.13:0,48,585	0/0:24,0:24:51.01:0,51,583	0/0:12,0:12:17.31:0,17,70	1/1:7,16:23:51.56:720,52,0	1/1:14,6:20:38.97:477,39,0	1/1:9,16:26:42.05:643,42,0	0/0:29,0:29:54.16:0,54,681	0/0:21,0:21:51.11:0,51,602	0/0:30,0:30:78.21:0,78,961	0/0:20,0:20:48.13:0,48,590	1/1:9,16:21:47.88:612,48,0	1/1:13,10:24:57.13:812,57,0	0/0:4,0:4:9.02:0,9,102
chr10	97323949	.	A	AG	756.55	PASS	AB=0.951;AC=10;AF=0.179;AN=56;BaseQRankSum=10.788;DP=641;FS=18.753;HRun=9;HaplotypeScore=94.7793;InbreedingCoeff=0.2390;MQ=66.12;MQ0=7;MQRankSum=-1.242;QD=4.13;ReadPosRankSum=3.688;VQSLOD=0.1626;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:55.88:358,56,0	0/0:7,0:7:14.99:0,15,129	0/0:44,0:28:46.90:0,47,377	0/0:26,0:15:15.28:0,15,189	0/0:22,0:22:53.94:0,54,456	0/0:29,0:29:68.97:0,69,599	0/0:36,0:37:79.99:0,80,683	0/0:31,0:29:47.92:0,48,407	0/1:14,10:23:99:121,0,215	0/0:22,0:22:62.96:0,63,542	0/0:11,0:11:14.98:0,15,130	0/0:16,1:17:5.81:0,6,279	0/0:23,0:23:59.96:0,60,515	0/0:19,0:19:38.97:0,39,338	0/0:20,0:20:35.97:0,36,312	0/0:23,0:23:56.96:0,57,490	0/0:19,0:19:47.98:0,48,417	1/1:1,11:12:21.06:232,21,0	0/1:22,0:22:33.49:33,0,93	0/1:18,0:18:19.17:19,0,29	0/1:26,0:25:31.51:57,0,32	0/0:22,0:23:53.01:0,53,446	0/0:22,0:22:50.94:0,51,436	0/0:32,0:33:83.01:0,83,709	0/0:22,0:23:56.01:0,56,473	0/1:29,0:25:31.17:31,0,115	0/1:24,0:24:21.75:61,0,22	0/0:5,0:5:5.98:0,6,52
chr10	97323950	.	G	GA	1601.94	PASS	AB=0.993;AC=8;AF=0.143;AN=56;BaseQRankSum=11.181;DP=638;FS=23.227;HRun=1;HaplotypeScore=88.9840;InbreedingCoeff=0.2370;MQ=67.04;MQ0=7;MQRankSum=-2.256;QD=10.27;ReadPosRankSum=3.167;VQSLOD=0.2034;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,24:30:69:898,69,0	0/0:8,0:8:18.05:0,18,219	0/0:43,0:28:52.75:0,53,639	0/0:28,0:16:41.38:0,41,448	0/0:23,0:23:61.98:0,62,757	0/0:28,0:28:75.22:0,75,993	0/0:37,0:37:99:0,105,1281	0/0:31,0:29:75.10:0,75,806	0/0:24,0:23:20.48:0,20,480	0/0:22,0:22:66.20:0,66,865	0/0:10,0:10:24.04:0,24,286	0/0:16,0:16:33.02:0,33,515	0/0:24,0:24:69.18:0,69,888	0/0:19,0:19:48.06:0,48,599	0/0:21,0:21:48.11:0,48,588	0/0:23,0:23:60.18:0,60,788	0/0:19,0:19:54.12:0,54,701	0/1:12,0:12:1.03:54,0,1	0/1:22,0:22:99:170,0,113	0/1:18,0:18:10.29:121,0,10	0/1:25,0:24:54.95:158,0,55	0/0:22,0:22:56.84:0,57,746	0/0:23,0:23:60.17:0,60,771	0/0:33,0:33:92.93:0,93,1182	0/0:23,0:23:62.85:0,63,783	0/1:27,0:23:99:174,0,163	0/1:21,1:22:39.63:168,0,40	0/0:5,0:5:12.01:0,12,134
chr10	97324737	.	G	GCC	5212.54	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=1.554;DP=546;FS=2.462;HRun=5;HaplotypeScore=70.9358;InbreedingCoeff=0.9867;MQ=83.79;MQ0=1;MQRankSum=-1.371;QD=41.70;ReadPosRankSum=0.891;VQSLOD=4.2238;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:87.26:0,87,1109	0/0:8,0:8:9.01:0,9,101	0/0:15,0:14:33.10:0,33,419	0/0:20,0:20:48.08:0,48,572	0/0:13,0:13:33.10:0,33,421	0/0:16,0:16:45.14:0,45,574	0/0:21,0:21:57.18:0,57,726	0/0:36,0:36:96.29:0,96,1200	0/0:17,0:17:48.15:0,48,611	0/0:24,0:24:66.20:0,66,841	0/0:12,0:12:33.11:0,33,421	0/0:31,0:31:90.24:0,90,1129	0/0:21,0:21:57.18:0,57,725	0/0:17,0:17:51.16:0,51,649	0/0:21,0:21:60.17:0,60,741	0/0:13,0:13:39.11:0,39,484	0/0:31,0:31:93.30:0,93,1185	1/1:2,15:17:42.14:718,42,0	1/1:3,10:13:36.12:620,36,0	1/1:2,14:16:39.09:638,39,0	1/1:4,39:45:99:1784,102,0	0/0:12,0:12:27.08:0,27,344	0/0:10,0:10:27.08:0,27,344	0/0:27,0:27:78.25:0,78,994	0/0:12,0:12:30.09:0,30,382	1/1:1,20:21:60.20:1033,60,0	1/1:3,10:13:24.08:420,24,0	0/0:8,0:8:24.08:0,24,306
chr10	97325214	.	CATT	C	2816.49	PASS	AB=0.556;AC=11;AF=0.196;AN=56;BaseQRankSum=9.898;DP=576;FS=0.450;HRun=0;HaplotypeScore=86.2969;InbreedingCoeff=0.8813;MQ=74.93;MQ0=1;MQRankSum=-1.932;QD=25.37;ReadPosRankSum=0.243;VQSLOD=3.6376;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,105,1554	0/0:9,0:9:24.07:0,24,420	0/0:19,0:17:26.90:0,27,327	0/0:12,0:11:15.02:0,15,225	0/0:28,0:28:75.12:0,75,1270	0/0:10,0:10:27.09:0,27,514	0/0:12,0:12:33.10:0,33,634	0/0:34,0:34:78.17:0,78,1284	0/0:20,0:20:42.10:0,42,744	0/0:34,0:34:87.13:0,87,1552	0/0:26,0:26:75.20:0,75,1356	0/0:13,0:13:27.01:0,27,336	0/0:12,0:12:33.09:0,33,607	0/0:20,0:20:42.13:0,42,807	0/0:18,0:18:42.03:0,42,691	0/0:24,0:24:57.13:0,57,1016	0/0:33,0:31:84.25:0,84,1615	1/1:15,0:15:21.90:117,22,0	1/1:7,15:22:45.01:610,45,0	1/1:1,13:14:35.07:460,35,0	1/1:5,11:16:24.08:368,24,0	0/0:15,0:15:42.13:0,42,824	0/0:20,0:20:54.17:0,54,1060	0/0:16,0:16:45.05:0,45,771	0/0:27,0:27:72.23:0,72,1422	0/1:4,20:25:31.95:816,0,32	1/1:2,17:19:42.14:624,42,0	0/0:21,0:21:45.08:0,45,763
chr10	97325222	.	TTA	T	1577.78	PASS	AB=0.931;AC=11;AF=0.196;AN=56;BaseQRankSum=12.959;DP=550;FS=1.429;HRun=0;HaplotypeScore=73.0594;InbreedingCoeff=0.8281;MQ=66.07;MQ0=4;MQRankSum=-1.213;QD=15.17;ReadPosRankSum=2.415;VQSLOD=3.4249;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:76.51:0,77,1027	0/0:8,0:8:24.04:0,24,331	0/0:11,0:9:26.77:0,27,277	0/0:8,0:7:15.02:0,15,187	0/0:27,0:27:71.69:0,72,1078	0/0:12,0:12:33.08:0,33,473	0/0:14,0:13:39.11:0,39,590	0/0:33,1:34:93.18:0,93,1228	0/0:17,0:17:45.09:0,45,657	0/0:31,0:31:93.12:0,93,1352	0/0:27,0:27:81.17:0,81,1179	0/0:15,0:15:41.88:0,42,437	0/0:13,0:13:39.08:0,39,556	0/0:15,0:15:42.11:0,42,659	0/0:18,0:17:33.88:0,34,592	0/0:23,0:23:66.11:0,66,923	0/0:32,0:30:90.23:0,90,1369	1/1:2,13:15:32.45:434,32,0	1/1:16,1:17:19.50:273,20,0	1/1:14,0:13:13.25:214,13,0	1/1:13,0:13:2.28:146,2,0	0/0:16,0:16:45.13:0,45,711	0/0:20,0:20:60.16:0,60,916	0/0:17,0:17:51.09:0,51,723	0/0:29,0:29:85.10:0,85,1289	0/1:25,2:27:94.37:425,0,94	1/1:18,0:17:19.60:255,20,0	0/0:17,0:17:45.08:0,45,654
chr10	97325224	.	A	AT	832.24	PASS	AB=0.953;AC=6;AF=0.107;AN=56;BaseQRankSum=-5.627;DP=550;FS=0.000;HRun=10;HaplotypeScore=66.3844;InbreedingCoeff=0.2419;MQ=64.09;MQ0=5;MQRankSum=-0.169;QD=10.53;ReadPosRankSum=-0.423;VQSLOD=2.5373;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,32:41:49.58:907,50,0	0/1:7,1:8:14.01:14,0,105	0/1:9,0:8:11.69:12,0,42	0/1:7,0:6:14.46:17,0,14	0/0:27,0:28:52.62:0,53,444	0/1:11,1:12:5.04:5,0,170	0/0:14,0:13:11.74:0,12,244	0/0:32,0:32:62.72:0,63,517	0/0:17,0:17:32.94:0,33,271	0/0:31,0:31:68.87:0,69,561	0/0:27,0:26:59.90:0,60,492	0/0:16,0:16:28.97:0,29,224	0/0:13,0:13:32.95:0,33,268	0/0:13,0:13:35.93:0,36,292	0/0:18,1:18:0.99:0,1,211	0/0:23,0:23:50.91:0,51,416	0/0:34,0:31:77.85:0,78,635	0/0:16,0:15:3.04:0,3,10	0/0:18,0:17:35.72:0,36,172	0/0:15,0:14:30.36:0,30,148	0/0:12,0:12:24.95:0,25,119	0/0:16,0:16:41.95:0,42,345	0/0:18,1:19:24.95:0,25,411	0/0:17,0:17:41.93:0,42,344	0/0:30,0:30:75.76:0,76,615	0/0:27,0:27:35.85:0,36,307	0/0:19,0:18:41.84:0,42,205	0/0:15,0:15:32.54:0,33,271
chr10	97325699	.	GAATA	G	866.48	PASS	AB=0.828;AC=9;AF=0.161;AN=56;BaseQRankSum=8.704;DP=520;FS=5.146;HRun=0;HaplotypeScore=94.5888;InbreedingCoeff=0.5558;MQ=59.74;MQ0=39;MQRankSum=1.244;QD=8.58;ReadPosRankSum=-0.992;VQSLOD=2.2667;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:46.10:0,46,1026	0/0:4,0:4:12.04:0,12,281	0/0:18,0:16:45.54:0,46,922	0/0:22,0:21:57.66:0,58,1347	0/0:20,0:19:39.97:0,40,930	0/0:27,0:25:67.17:0,67,1584	0/0:34,0:31:53.96:0,54,1541	0/0:23,0:22:65.60:0,66,1410	0/0:19,0:18:48.16:0,48,1124	0/0:15,0:13:27.97:0,28,707	0/0:14,0:13:30.10:0,30,710	0/0:15,0:13:30.57:0,31,721	0/0:14,0:13:8.73:0,9,644	0/0:14,0:13:33.10:0,33,753	0/0:14,0:14:36.12:0,36,872	0/1:10,0:10:7.11:7,0,499	0/0:23,0:21:40.24:0,40,821	1/1:15,0:15:37.41:287,37,0	1/1:11,0:11:4.13:153,4,0	0/1:13,1:13:8.09:8,0,62	1/1:29,0:24:40.89:272,41,0	0/0:11,0:9:21.07:0,21,494	0/0:20,0:16:43.09:0,43,941	0/0:30,0:28:61.15:0,61,1359	0/0:15,0:14:25.50:0,25,596	0/1:4,18:20:99:286,0,99	0/0:1,15:16:0.47:0,0,1	0/0:23,0:16:45.15:0,45,1055
chr10	97325700	.	AAT	A	1978.41	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=4.301;DP=503;FS=3.164;HRun=0;HaplotypeScore=74.7767;InbreedingCoeff=0.8123;MQ=61.15;MQ0=24;MQRankSum=1.663;QD=19.98;ReadPosRankSum=-1.533;VQSLOD=3.3564;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:45.15:0,45,685	0/0:4,0:4:12.04:0,12,187	0/0:20,0:18:50.65:0,51,728	0/0:22,0:21:52.74:0,53,867	0/0:19,0:19:39.07:0,39,623	0/0:25,0:26:69.15:0,69,1108	0/0:34,0:31:71.62:0,72,1057	0/0:24,0:23:63.93:0,64,951	0/0:19,0:19:51.14:0,51,808	0/0:13,0:12:23.15:0,23,462	0/0:15,0:13:30.07:0,30,476	0/0:15,0:13:30.07:0,30,489	0/0:14,0:13:22.15:0,22,441	0/0:14,0:13:33.08:0,33,507	0/0:14,0:14:36.12:0,36,594	0/0:10,0:10:9.10:0,9,334	0/0:21,0:21:35.01:0,35,578	1/1:15,0:15:39.10:521,39,0	1/1:1,9:10:27.06:363,27,0	1/1:1,11:12:14.90:123,15,0	1/1:24,0:21:41.48:604,41,0	0/0:9,0:9:21.04:0,21,323	0/0:19,0:16:42.11:0,42,646	0/0:30,0:28:60.17:0,60,919	0/0:14,0:14:24.05:0,24,396	0/1:22,0:20:52.53:529,0,53	0/1:16,0:16:0:0,0,0	0/0:21,0:16:45.15:0,45,705
chr10	97326370	.	C	CT	412.37	PASS	AB=0.884;AC=5;AF=0.093;AN=54;BaseQRankSum=-3.092;DP=369;FS=4.202;HRun=12;HaplotypeScore=56.1102;InbreedingCoeff=0.3049;MQ=79.58;MQ0=3;MQRankSum=-1.577;QD=6.87;ReadPosRankSum=0.429;VQSLOD=2.0172;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:27:48.08:467,48,0	./.	0/1:18,0:15:11.35:11,0,46	0/0:18,1:11:6.79:0,7,43	0/0:19,0:20:45.88:0,46,320	0/0:18,0:18:44.72:0,45,328	0/0:10,0:11:19.90:0,20,137	0/0:40,0:42:74.58:0,75,517	0/0:7,0:7:14.91:0,15,109	0/0:9,0:9:17.89:0,18,131	0/0:10,0:10:21.23:0,21,139	0/0:6,0:7:19.93:0,20,137	0/0:6,0:6:17.84:0,18,126	0/0:8,0:8:17.87:0,18,130	0/0:14,0:14:35.77:0,36,261	0/0:5,0:5:14.91:0,15,109	0/0:21,0:21:41.72:0,42,306	0/0:13,0:13:32.80:0,33,240	0/0:26,0:26:30.05:0,30,316	0/0:11,0:11:17.87:0,18,131	0/1:6,1:7:8.30:8,0,110	0/0:3,0:5:7.99:0,8,50	0/0:4,0:5:10.98:0,11,71	0/1:5,2:7:43.45:43,0,51	0/0:12,0:12:26.80:0,27,196	0/0:14,0:14:32.80:0,33,241	0/0:10,0:10:23.81:0,24,169	0/0:13,0:13:35.79:0,36,262
chr10	97326788	.	TA	T	2385.87	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.875;DP=552;FS=9.032;HRun=7;HaplotypeScore=52.8933;InbreedingCoeff=0.9039;MQ=68.99;MQ0=0;MQRankSum=-0.182;QD=24.85;ReadPosRankSum=1.243;VQSLOD=3.9449;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.28:0,87,1094	0/0:8,0:8:18.06:0,18,226	0/0:9,0:9:15.05:0,15,183	0/0:4,0:5:2.01:0,2,80	0/0:29,0:29:81.24:0,81,996	0/0:31,0:31:87.28:0,87,1093	0/0:15,0:15:42.10:0,42,500	0/0:37,0:36:99:0,105,1252	0/0:26,0:26:69.19:0,69,836	0/0:26,0:26:78.23:0,78,951	0/0:28,0:28:75.22:0,75,918	0/0:10,0:10:30.07:0,30,352	0/0:21,0:21:63.19:0,63,771	0/0:17,0:17:45.13:0,45,551	0/0:24,0:24:69.21:0,69,857	0/0:17,0:17:48.15:0,48,603	0/0:26,0:26:69.22:0,69,868	0/0:16,0:16:45.09:0,45,535	1/1:2,19:21:57.12:581,57,0	1/1:2,13:15:39.05:387,39,0	1/1:1,1:2:3.01:31,3,0	0/0:13,0:13:39.12:0,39,491	0/0:19,0:19:51.15:0,51,628	0/0:15,0:15:45.14:0,45,566	0/0:26,0:26:75.24:0,75,944	1/1:3,23:26:34.42:666,34,0	1/1:1,31:32:87.16:887,87,0	0/0:5,0:5:15.05:0,15,189
chr10	97327542	.	A	AG	4220.82	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=6.504;DP=608;FS=0.374;HRun=8;HaplotypeScore=69.5460;InbreedingCoeff=0.9982;MQ=86.73;MQ0=0;MQRankSum=-2.120;QD=23.85;ReadPosRankSum=0.511;VQSLOD=5.4163;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,26:34:38.73:697,39,0	0/0:9,0:9:24.01:0,24,220	0/0:30,0:30:31.63:0,32,511	0/0:22,0:21:26.88:0,27,224	0/0:13,0:13:27:0,27,246	0/0:21,0:21:63.02:0,63,572	0/0:19,0:19:53.99:0,54,483	0/0:29,0:29:66:0,66,601	0/0:26,0:26:69.01:0,69,627	0/0:18,0:18:38.98:0,39,351	0/0:23,0:23:56.99:0,57,516	0/0:21,0:21:54.03:0,54,494	0/0:12,0:12:36.02:0,36,329	0/0:29,0:29:72.03:0,72,659	0/0:28,0:28:69.02:0,69,632	0/0:17,0:17:41.99:0,42,375	0/0:32,0:32:93.05:0,93,851	1/1:3,23:27:69.04:776,69,0	1/1:6,7:13:32.86:317,33,0	1/1:3,12:15:27:281,27,0	1/1:5,35:40:62.80:976,63,0	0/0:11,0:11:30.01:0,30,272	0/0:12,0:13:32.04:0,32,280	0/0:33,0:33:78.02:0,78,714	0/0:16,0:16:32.99:0,33,302	1/1:3,11:14:30.09:346,30,0	1/1:4,30:33:72.10:828,72,0	0/0:9,0:9:24.01:0,24,219
chr10	97328264	.	TAC	T	9393.33	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=17.126;DP=1026;FS=6.064;HRun=0;HaplotypeScore=128.1934;InbreedingCoeff=0.9999;MQ=60.21;MQ0=4;MQRankSum=0.118;QD=34.41;ReadPosRankSum=3.404;VQSLOD=7.1423;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,126,2260	0/0:20,0:20:57.20:0,57,1020	0/0:35,0:22:29.90:0,30,772	0/0:30,0:24:45.59:0,46,920	0/0:32,0:32:67.09:0,67,1493	0/0:22,0:22:66.23:0,66,1182	0/0:45,0:45:99:0,123,2131	0/0:23,0:23:66.23:0,66,1179	0/0:43,0:43:99:0,108,1876	0/0:42,0:42:99:0,117,2041	0/0:20,0:20:60.21:0,60,1067	0/0:59,0:59:99:0,172,2988	0/0:50,0:50:99:0,129,2229	0/0:49,0:49:99:0,132,2321	0/0:53,0:53:99:0,147,2583	0/0:36,0:36:99:0,105,1843	0/0:21,0:21:54.17:0,54,965	1/1:3,24:27:41.23:894,41,0	1/1:0,29:29:84.24:1132,84,0	1/1:2,20:22:51.17:714,51,0	1/1:5,121:126:99:4200,301,0	0/0:22,0:22:63.22:0,63,1126	0/0:28,0:28:75.24:0,75,1313	0/0:31,0:31:90.31:0,90,1620	0/0:27,0:27:75.24:0,75,1305	1/1:3,38:41:99:1575,114,0	1/1:4,24:28:63.21:878,63,0	0/0:19,0:19:57.16:0,57,953
chr10	97328541	.	G	GT	1798.65	PASS	AB=0.900;AC=19;AF=0.339;AN=56;BaseQRankSum=-2.953;DP=608;FS=6.462;HRun=13;HaplotypeScore=86.7660;InbreedingCoeff=0.0860;MQ=69.68;MQ0=1;MQRankSum=0.765;QD=5.57;ReadPosRankSum=-4.467;VQSLOD=1.4372;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,1:18:1.64:0,2,142	0/1:15,2:19:5.46:5,0,232	0/0:15,0:12:2.14:0,2,86	0/1:18,0:14:5.62:6,0,45	0/0:32,1:38:20.75:0,21,381	0/0:13,1:16:2.73:0,3,148	0/0:8,0:9:22.80:0,23,148	0/1:32,2:36:25.14:25,0,154	0/1:11,2:14:23.36:23,0,149	0/0:31,2:35:4.60:0,5,300	0/0:30,0:30:71.35:0,71,493	0/1:17,0:17:8.01:8,0,165	0/0:18,0:20:22.65:0,23,255	0/1:18,1:19:17.50:17,0,153	0/1:13,1:15:13.80:14,0,172	0/0:14,0:15:7.87:0,8,163	0/0:26,0:26:48.20:0,48,343	0/0:23,0:23:32.47:0,32,221	0/1:9,14:24:8.07:330,0,8	1/1:7,25:32:42.76:498,43,0	1/1:1,6:7:9.01:84,9,0	0/1:14,1:15:1.14:1,0,135	0/1:21,5:26:30.33:30,0,253	0/0:10,0:12:30.77:0,31,195	0/1:15,1:18:45.17:45,0,154	1/1:21,12:34:46.37:521,46,0	1/1:16,11:26:12.84:359,13,0	0/0:25,1:28:8:0,8,291
chr10	97332514	.	TA	T	4699.38	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.738;DP=713;FS=5.525;HRun=9;HaplotypeScore=75.8584;InbreedingCoeff=0.9977;MQ=77.46;MQ0=3;MQRankSum=-3.416;QD=23.15;ReadPosRankSum=2.838;VQSLOD=5.8395;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,42:48:99:1069,116,0	0/0:13,0:13:36.11:0,36,412	0/0:22,1:23:23.74:0,24,510	0/0:20,0:19:21.46:0,21,211	0/0:25,0:25:75.17:0,75,839	0/0:30,0:30:78.22:0,78,891	0/0:19,2:21:20.68:0,21,491	0/0:45,0:44:96.28:0,96,1102	0/0:27,0:27:78.22:0,78,888	0/0:32,0:32:84.22:0,84,943	0/0:20,0:20:39.11:0,39,440	0/0:19,0:19:42.12:0,42,480	0/0:22,0:22:60.17:0,60,683	0/0:22,0:22:57.12:0,57,634	0/0:23,0:23:63.17:0,63,710	0/0:25,0:25:63.17:0,63,716	0/0:24,0:24:63.17:0,63,715	1/1:2,12:14:36.02:329,36,0	1/1:4,17:20:50.98:458,51,0	1/1:5,20:24:60.03:549,60,0	1/1:3,28:30:84.04:769,84,0	0/0:35,0:35:93.10:0,93,1015	0/0:21,0:21:57.16:0,57,649	0/0:22,0:22:54.14:0,54,606	0/0:32,0:32:84.25:0,84,967	1/1:3,25:28:43.41:647,43,0	1/1:3,33:36:96.04:878,96,0	0/0:9,0:9:24.07:0,24,277
chr10	97334078	.	T	TAC	4165.07	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-9.130;DP=670;FS=0.405;HRun=0;HaplotypeScore=96.9484;InbreedingCoeff=0.9180;MQ=66.22;MQ0=1;MQRankSum=0.197;QD=23.40;ReadPosRankSum=0.975;VQSLOD=4.3416;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:38:5.81:49,6,0	0/0:13,0:13:33.10:0,33,403	0/0:29,0:25:1:0,1,265	0/0:25,0:21:18.04:0,18,341	0/0:13,0:14:35.94:0,36,417	0/0:24,0:26:54.75:0,55,701	0/0:32,0:33:81.01:0,81,924	0/0:38,0:38:34.35:0,34,602	0/0:19,0:19:26.20:0,26,549	0/0:26,0:27:66.01:0,66,755	0/0:19,0:20:44.95:0,45,503	0/0:15,0:15:33.10:0,33,403	0/0:25,0:26:69.05:0,69,820	0/0:30,0:30:57.18:0,57,696	0/0:21,0:21:45.14:0,45,550	0/0:24,0:24:51.12:0,51,607	0/0:20,0:20:54.17:0,54,660	1/1:6,0:17:29.84:252,30,0	1/1:7,15:23:8.47:610,8,0	1/1:5,13:18:30.10:483,30,0	1/1:2,28:30:63.22:1022,63,0	0/0:28,0:28:67.09:0,67,808	0/0:21,0:22:44.96:0,45,514	0/0:22,0:22:51.12:0,51,606	0/0:26,0:26:63.11:0,63,737	1/1:6,23:29:69.19:1055,69,0	1/1:5,17:23:11.49:693,11,0	0/0:12,0:13:35.91:0,36,397
chr10	97335512	.	T	TCTCAATTTAA	21909.88	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-0.164;DP=715;FS=2.322;HRun=0;HaplotypeScore=207.1751;InbreedingCoeff=0.9992;MQ=88.02;MQ0=0;MQRankSum=-18.094;QD=114.71;ReadPosRankSum=-2.773;VQSLOD=4.2947;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,25:41:99:4952,108,0	0/0:11,0:11:33.11:0,33,1101	0/0:33,0:33:84.24:0,84,2371	0/0:26,0:26:65.78:0,66,1688	0/0:22,0:22:63.20:0,63,1953	0/0:22,0:22:66.23:0,66,2185	0/0:22,0:22:63.22:0,63,2004	0/0:35,0:35:96.30:0,96,2894	0/0:34,0:34:93.30:0,93,2824	0/0:34,0:34:96.31:0,96,2891	0/0:18,0:18:54.19:0,54,1779	0/0:27,0:27:78.25:0,78,2526	0/0:24,0:24:72.25:0,72,2329	0/0:27,0:27:78.27:0,78,2561	0/0:37,0:37:99:0,102,3335	0/0:23,0:23:69.19:0,69,2066	0/0:30,0:30:78.27:0,78,2511	1/1:5,11:18:45.15:2339,45,0	1/1:13,2:16:39.11:1564,39,0	1/1:6,16:19:57.20:2574,57,0	1/1:6,10:21:35.86:1362,36,0	0/0:16,0:16:45.15:0,45,1374	0/0:15,0:15:45.15:0,45,1399	0/0:38,0:38:99:0,108,3594	0/0:23,0:23:66.23:0,66,2186	1/1:19,23:44:99:5722,123,0	1/1:11,15:27:75.26:3396,75,0	0/0:7,0:7:21.07:0,21,682
chr10	97336995	.	GCTGGGGCTAGAAAA	G	1672.24	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=6.568;DP=588;FS=1.000;HRun=0;HaplotypeScore=172.0436;InbreedingCoeff=0.8994;MQ=52.22;MQ0=57;MQRankSum=-5.810;QD=52.26;ReadPosRankSum=0.103;VQSLOD=3.3107;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:32:45.15:1767,45,0	0/0:9,0:9:27.09:0,27,1793	0/0:25,0:2:6.02:0,6,323	./.	0/0:20,0:20:45.15:0,45,2916	0/0:15,0:15:33.11:0,33,2308	0/0:30,0:28:72.25:0,72,4396	0/0:32,0:26:78.27:0,78,4828	0/0:21,0:21:51.18:0,51,3284	0/0:25,0:25:72.25:0,72,4255	0/0:15,0:14:30.10:0,30,1896	0/0:26,0:26:60.19:0,60,3658	0/0:25,0:25:69.24:0,69,4578	0/0:24,0:23:57.20:0,57,3456	0/0:26,0:26:60.19:0,60,3843	0/0:17,0:17:42.14:0,42,2598	0/0:30,0:29:78.27:0,78,5057	0/0:19,0:19:45.13:0,45,2684	0/0:20,0:14:39.08:0,39,1680	0/0:13,0:13:33.11:0,33,1984	0/0:22,0:22:48.16:0,48,2934	0/0:20,0:17:30.10:0,30,1832	0/0:14,0:14:33.11:0,33,2204	0/0:24,0:24:57.15:0,57,3431	0/0:8,0:8:24.07:0,24,1492	0/0:20,0:20:57.20:0,57,3814	0/0:27,0:25:72.25:0,72,4539	0/0:12,0:10:24.08:0,24,1697
chr10	97337241	.	CTGTGTG	C	85.75	PASS	AB=1.000;AC=8;AF=0.167;AN=48;BaseQRankSum=4.181;DP=510;FS=1.697;HRun=0;HaplotypeScore=104.0380;InbreedingCoeff=0.4921;MQ=71.88;MQ0=12;MQRankSum=-2.054;QD=0.80;ReadPosRankSum=0.193;VQSLOD=2.0425;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:31:6.89:55,7,0	0/0:1,0:3:3.01:0,3,78	./.	./.	0/0:10,0:12:6.02:0,6,144	0/0:13,0:13:15.03:0,15,372	0/0:25,0:25:11.77:0,12,282	0/0:20,0:20:2.97:0,3,20	0/0:7,0:7:6.02:0,6,164	0/0:14,0:13:9.02:0,9,211	./.	0/0:26,0:25:27.06:0,27,623	0/0:20,0:20:12:0,12,226	0/0:12,0:12:6.02:0,6,134	0/0:23,0:22:12.93:0,13,292	0/0:20,0:19:27.07:0,27,711	0/0:20,0:22:15.04:0,15,271	1/1:9,7:17:6.84:80,7,0	0/1:32,0:29:0.66:1,0,1	./.	0/0:50,0:49:5.94:0,6,43	0/0:11,0:11:9.03:0,9,253	0/0:8,0:8:3.01:0,3,92	0/0:32,0:31:39.12:0,39,851	0/0:13,0:13:24.07:0,24,583	0/1:17,0:15:0.37:0,0,0	1/1:8,1:9:3.01:60,3,0	0/0:6,0:6:3.01:0,3,70
chr10	97338204	.	A	AAAAC	7396.81	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-10.768;DP=711;FS=4.249;HRun=0;HaplotypeScore=104.8079;InbreedingCoeff=0.9944;MQ=64.39;MQ0=6;MQRankSum=-0.122;QD=37.36;ReadPosRankSum=2.905;VQSLOD=4.9595;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,18:32:42.14:1011,42,0	0/0:12,0:12:21.07:0,21,337	0/0:35,0:28:21:0,21,284	0/0:28,0:25:26.61:0,27,411	0/0:22,0:22:48.15:0,48,752	0/0:16,0:16:21.07:0,21,339	0/0:35,0:35:51.65:0,52,823	0/0:39,0:39:72.19:0,72,1022	0/0:26,0:26:66.21:0,66,1041	0/0:29,0:29:69.24:0,69,1113	0/0:20,0:20:48.16:0,48,776	0/0:20,0:20:36.12:0,36,579	0/0:20,0:20:36.12:0,36,575	0/0:22,0:22:45.15:0,45,724	0/0:22,0:22:39.13:0,39,605	0/0:19,0:19:42.14:0,42,679	0/0:34,0:34:78.21:0,78,1202	1/1:12,1:23:18.02:282,18,0	1/1:24,22:44:60.15:1319,60,0	1/1:7,19:26:54.18:1270,54,0	1/1:3,6:9:18.06:434,18,0	0/0:26,0:26:60.17:0,60,895	0/0:19,0:19:45.15:0,45,725	0/0:21,0:21:51.17:0,51,821	0/0:25,0:25:51.16:0,51,794	1/1:12,32:43:99:2373,105,0	1/1:4,12:16:30.10:708,30,0	0/0:23,0:23:39.13:0,39,621
chr10	97338633	.	CGT	C	172.34	PASS	AB=0.949;AC=12;AF=0.214;AN=56;BaseQRankSum=5.163;DP=737;FS=11.529;HRun=0;HaplotypeScore=145.5030;InbreedingCoeff=-0.1359;MQ=63.51;MQ0=11;MQRankSum=0.057;QD=0.57;ReadPosRankSum=1.174;VQSLOD=2.3215;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:3.16:15,3,0	0/1:7,1:7:24.45:24,0,44	0/0:24,0:17:5.83:0,6,33	0/0:28,0:23:8.87:0,9,74	0/0:25,0:25:9.31:0,9,220	0/1:16,0:16:24.56:25,0,227	0/1:40,2:40:58.27:58,0,468	0/1:37,0:35:10.17:10,0,260	0/0:23,0:23:22.51:0,23,353	0/1:22,0:22:36.65:37,0,154	0/0:8,0:8:1.82:0,2,5	0/1:33,3:36:29.89:30,0,449	0/0:24,0:23:8.31:0,8,221	0/1:37,0:38:0.92:1,0,484	0/1:22,2:24:42.95:43,0,313	0/1:15,2:16:45.94:46,0,205	0/1:34,1:35:24.66:25,0,667	0/0:8,0:8:4.81:0,5,29	0/0:23,0:19:13.64:0,14,73	0/0:7,0:13:7.07:0,7,38	0/0:82,0:83:44.39:0,44,397	0/0:22,0:22:21.06:0,21,292	0/0:10,0:10:8.99:0,9,84	0/0:53,1:54:19.83:0,20,782	0/0:22,0:22:29:0,29,294	0/0:30,0:31:26.11:0,26,242	0/0:14,0:12:14.47:0,14,100	0/0:14,0:12:17.06:0,17,187
chr10	97338767	.	GGT	G	1781.20	PASS	AB=0.899;AC=23;AF=0.411;AN=56;BaseQRankSum=11.581;DP=1418;FS=17.887;HRun=0;HaplotypeScore=265.6426;InbreedingCoeff=-0.5953;MQ=43.15;MQ0=59;MQRankSum=-3.212;QD=1.57;ReadPosRankSum=0.548;VQSLOD=1.1102;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,1:8:2.93:33,3,0	0/1:12,2:13:53.12:53,0,222	0/0:57,0:4:6.01:0,6,79	0/1:48,0:11:6.89:7,0,142	0/1:21,2:22:29.06:29,0,604	0/0:41,2:41:21.63:0,22,1182	0/1:57,12:68:99:153,0,1840	0/0:97,3:77:69.51:0,70,2597	0/1:42,7:44:99:205,0,1034	0/1:66,7:68:99:197,0,1876	0/1:20,3:22:47.13:47,0,374	0/1:57,6:59:52.30:52,0,1679	0/0:35,2:35:1.16:0,1,1050	0/0:43,2:43:7.85:0,8,1159	0/1:48,3:50:99:101,0,1154	0/1:29,2:29:48.03:48,0,792	0/1:47,7:52:0.78:1,0,1551	0/0:3,0:2:3.01:0,3,41	0/1:51,0:27:5.47:5,0,680	0/1:28,6:34:99:136,0,599	0/1:161,23:173:99:140,0,3774	0/1:40,10:48:99:222,0,888	0/1:26,4:30:70.71:71,0,534	0/1:88,17:104:75.69:76,0,2651	0/1:30,13:41:99:250,0,843	0/1:71,4:65:25:25,0,1688	0/1:20,3:23:31.99:32,0,611	0/1:28,1:28:48.67:49,0,846
chr10	97338848	.	G	GT	219.79	PASS	AB=0.923;AC=8;AF=0.148;AN=54;BaseQRankSum=9.835;DP=1067;FS=76.975;HRun=1;HaplotypeScore=280.7408;InbreedingCoeff=0.0488;MQ=45.38;MQ0=18;MQRankSum=-7.678;QD=0.76;ReadPosRankSum=1.937;VQSLOD=-0.6845;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:6:4.26:39,4,0	0/0:12,0:11:24.08:0,24,335	0/0:57,0:27:61.73:0,62,773	0/0:53,1:23:53.92:0,54,688	0/0:30,0:30:70.98:0,71,978	0/0:18,0:15:36.06:0,36,462	0/0:52,6:52:27.97:0,28,1574	0/1:66,7:54:99:165,0,1405	0/1:36,2:33:12.05:12,0,868	0/0:36,2:36:7.91:0,8,1237	0/0:16,0:16:31.93:0,32,414	0/0:40,1:35:68.14:0,68,1053	0/0:30,0:27:28.69:0,29,813	0/0:54,2:46:52.19:0,52,1384	0/1:41,3:37:21.97:22,0,1113	0/1:33,3:32:50.58:51,0,965	0/0:34,0:32:91.82:0,92,1201	./.	0/1:31,3:27:25.25:25,0,872	0/0:26,0:26:60.06:0,60,780	0/0:118,4:115:99:0,187,2725	0/0:31,2:33:83.33:0,83,1101	0/0:20,0:20:47.31:0,47,566	0/0:61,2:61:99:0,110,1474	0/0:21,0:21:63.17:0,63,854	0/1:52,5:51:37.32:37,0,1671	0/0:17,0:17:36.12:0,36,503	0/0:21,2:24:55.59:0,56,781
chr10	97338998	.	GC	G	3163.16	PASS	AB=0.750;AC=38;AF=0.864;AN=44;BaseQRankSum=0.006;DP=268;FS=5.473;HRun=1;HaplotypeScore=129.1813;InbreedingCoeff=0.4288;MQ=41.48;MQ0=8;MQRankSum=-2.443;QD=13.40;ReadPosRankSum=1.424;VQSLOD=2.8780;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:11,1:4:11.95:0,12,132	0/1:8,0:3:17.69:18,0,56	0/1:0,2:1:0:0,0,0	1/1:0,12:9:12.04:167,12,0	1/1:0,9:2:3.01:42,3,0	./.	1/1:0,16:11:30.07:384,30,0	1/1:0,12:6:15.05:203,15,0	1/1:0,4:3:0.47:1,0,0	1/1:0,28:21:26.78:359,27,0	1/1:0,11:7:12:145,12,0	1/1:0,25:13:25.96:328,26,0	1/1:0,15:8:1.62:40,2,0	1/1:1,10:7:18.06:249,18,0	./.	./.	1/1:0,5:5:15.05:208,15,0	1/1:0,5:5:6.49:85,6,0	1/1:8,12:17:3.45:10,3,0	1/1:0,9:7:8.86:95,9,0	1/1:0,2:2:2.68:11,3,0	1/1:1,11:10:11.91:141,12,0	./.	1/1:0,24:14:42.14:586,42,0	1/1:0,6:5:15.05:209,15,0	0/0:1,0:1:2.94:0,3,18
chr10	97339036	.	G	GGT	1007.85	PASS	AB=0.853;AC=17;AF=0.340;AN=50;BaseQRankSum=3.858;DP=451;FS=4.415;HRun=0;HaplotypeScore=183.8420;InbreedingCoeff=-0.4220;MQ=49.57;MQ0=16;MQRankSum=-4.579;QD=3.61;ReadPosRankSum=0.542;VQSLOD=2.1164;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:6,2:8:32.55:43,0,33	1/1:18,0:6:1.55:4,2,0	0/0:20,0:10:11.40:0,11,102	0/0:12,5:16:14.95:0,15,128	0/1:15,2:12:35.60:36,0,114	0/0:19,0:15:15.02:0,15,160	0/0:14,0:4:1.55:0,2,4	0/1:16,4:14:99:116,0,124	0/1:19,4:16:99:211,0,247	0/0:8,2:9:5.14:0,5,44	0/1:24,7:21:99:165,0,110	0/1:11,1:8:61.53:133,0,62	0/1:24,2:15:11.61:12,0,258	0/1:17,3:13:28.20:28,0,85	0/1:12,2:10:1.81:2,0,188	0/1:7,1:7:34.26:34,0,155	./.	./.	0/0:12,3:15:9.22:0,9,110	0/0:38,1:35:1.82:0,2,222	0/1:19,9:25:99:132,0,111	0/0:11,2:13:4.17:0,4,166	0/0:19,1:17:16.93:0,17,155	0/1:6,5:10:38.39:38,0,103	0/1:23,5:17:99:106,0,403	0/1:6,1:7:37.52:38,0,104	0/1:7,0:7:11.31:47,0,11
chr10	97339140	.	G	GTA	171.72	PASS	AB=0.980;AC=8;AF=0.154;AN=52;BaseQRankSum=6.150;DP=664;FS=40.300;HRun=0;HaplotypeScore=206.0467;InbreedingCoeff=0.0658;MQ=31.47;MQ0=62;MQRankSum=-5.225;QD=0.97;ReadPosRankSum=-3.562;VQSLOD=0.5367;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,1:7:5.75:51,6,0	0/0:9,0:8:11.75:0,12,157	./.	0/0:36,0:2:6.02:0,6,83	0/0:21,0:19:24.69:0,25,407	0/0:13,0:12:17.69:0,18,203	0/1:33,1:30:73.91:74,0,381	0/1:38,2:22:48.23:48,0,541	0/0:17,0:16:21.30:0,21,228	0/0:53,0:49:99:0,113,1640	0/0:14,0:13:11.52:0,12,116	0/0:32,0:32:23.03:0,23,420	0/0:17,0:16:35.99:0,36,513	0/0:21,0:20:29.14:0,29,436	0/1:19,0:18:15.40:15,0,295	0/0:15,0:16:38.59:0,39,446	0/1:19,0:17:38.05:38,0,433	./.	0/1:22,0:8:1.12:1,0,144	0/0:26,0:26:53.12:0,53,613	0/0:54,0:48:50.25:0,50,677	0/0:22,0:22:34.59:0,35,437	0/0:15,0:15:31.15:0,31,457	0/1:33,0:32:70.02:70,0,316	0/0:20,0:19:29.89:0,30,374	0/0:31,1:25:42.33:0,42,773	0/0:9,0:9:14.95:0,15,155	0/0:11,0:11:27.09:0,27,404
chr10	97339155	.	G	GGT	338.52	PASS	AB=0.940;AC=14;AF=0.269;AN=52;BaseQRankSum=4.172;DP=477;FS=44.836;HRun=0;HaplotypeScore=120.0686;InbreedingCoeff=-0.1704;MQ=31.20;MQ0=32;MQRankSum=-6.446;QD=1.49;ReadPosRankSum=1.675;VQSLOD=0.4510;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:7:2.60:11,3,0	0/0:6,0:6:8.96:0,9,104	./.	0/0:25,0:2:3:0,3,28	0/0:14,1:14:9.65:0,10,151	0/0:10,0:9:2.98:0,3,39	0/1:23,2:22:25.96:39,0,26	0/1:29,0:19:49.92:50,0,109	1/1:9,1:9:3.89:36,4,0	0/1:35,0:31:99:123,0,352	0/0:10,0:9:2.68:0,3,39	0/1:28,0:28:22.22:47,0,22	0/1:9,2:11:23.65:24,0,76	0/0:16,0:18:8.14:0,8,110	0/1:18,0:17:6.83:7,0,56	0/1:12,0:13:25.36:59,0,25	0/0:14,1:13:20.98:0,21,262	./.	0/0:16,0:7:8.70:0,9,91	0/0:11,0:11:12.04:0,12,159	0/0:42,0:41:20.36:0,20,255	0/1:17,0:17:19.60:20,0,31	0/0:10,1:11:5.75:0,6,78	0/0:20,1:21:11.86:0,12,123	0/0:10,1:11:5.87:0,6,59	0/1:24,0:23:23.29:23,0,233	0/1:4,1:5:23.46:41,0,23	0/0:7,0:6:6.01:0,6,65
chr10	97339162	.	G	GTGGA	671.11	PASS	AB=0.786;AC=11;AF=0.212;AN=52;BaseQRankSum=-0.119;DP=361;FS=35.352;HRun=0;HaplotypeScore=99.3499;InbreedingCoeff=-0.1799;MQ=30.87;MQ0=22;MQRankSum=-5.344;QD=4.69;ReadPosRankSum=3.542;VQSLOD=0.2948;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:7:1.37:0,1,3	0/0:5,0:5:8.96:0,9,130	./.	0/0:16,0:2:3:0,3,29	0/0:11,1:11:11.91:0,12,207	0/0:5,3:8:2.98:0,3,50	0/1:20,0:16:22.31:22,0,34	0/0:14,0:10:5.84:0,6,206	1/1:7,1:7:2.88:87,3,0	0/1:17,6:19:99:389,0,554	0/0:5,5:9:2.38:0,2,49	0/1:13,7:20:40.62:47,0,41	0/1:7,3:10:23.27:23,0,115	0/0:11,7:17:8.33:0,8,137	0/1:8,5:14:9.47:9,0,77	0/1:7,4:11:44.01:61,0,44	0/0:12,0:10:20.72:0,21,383	./.	0/0:11,0:6:8.82:0,9,124	0/0:8,2:10:12.04:0,12,239	0/0:32,0:29:20.59:0,21,354	0/1:8,5:15:7.72:8,0,57	0/0:8,1:9:5.85:0,6,104	0/0:16,0:17:11.98:0,12,166	0/0:6,2:8:5.76:0,6,80	0/1:15,2:16:69.49:69,0,347	0/1:3,1:4:34.54:89,0,35	0/0:5,0:4:6.01:0,6,88
chr10	97343626	.	CGTGT	C	448.21	PASS	AB=0.890;AC=8;AF=0.174;AN=46;BaseQRankSum=3.364;DP=555;FS=0.000;HRun=0;HaplotypeScore=91.2797;InbreedingCoeff=0.3049;MQ=72.43;MQ0=12;MQRankSum=0.885;QD=3.56;ReadPosRankSum=-0.254;VQSLOD=1.6199;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,4:33:37.45:40,0,37	./.	./.	./.	0/0:14,0:14:21.05:0,21,331	0/0:11,0:12:2.74:0,3,12	0/0:21,0:23:18.52:0,19,358	0/0:27,0:26:2.97:0,3,20	0/0:17,0:18:11.76:0,12,152	0/1:15,1:15:21.90:40,0,22	0/0:9,0:9:3:0,3,26	0/0:18,0:18:18.01:0,18,264	0/0:14,0:14:12.04:0,12,255	0/0:15,0:16:17.58:0,18,227	0/0:21,0:20:12.04:0,12,200	0/0:18,0:21:23.29:0,23,360	1/1:25,9:34:26.27:397,26,0	0/1:17,2:19:15.92:40,0,16	./.	0/1:7,0:9:0:0,0,0	./.	0/0:12,0:12:11.78:0,12,168	0/0:12,0:12:11.83:0,12,224	0/0:15,0:17:17.80:0,18,280	0/0:15,0:16:17.80:0,18,259	0/0:20,0:20:2.99:0,3,23	1/1:11,0:12:6.01:56,6,0	0/0:11,0:12:8.77:0,9,127
chr10	97345118	.	CG	C	408.92	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.132;DP=437;FS=2.469;HRun=4;HaplotypeScore=48.6324;InbreedingCoeff=0.9646;MQ=83.02;MQ0=0;MQRankSum=-1.217;QD=29.21;ReadPosRankSum=1.375;VQSLOD=3.4523;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.27:0,81,1128	0/0:7,0:7:21.06:0,21,276	0/0:7,0:7:21.04:0,21,242	0/0:27,0:26:55.85:0,56,618	0/0:12,0:12:30.06:0,30,397	0/0:16,0:16:48.16:0,48,668	0/0:18,0:18:48.13:0,48,632	0/0:19,0:19:57.18:0,57,776	0/0:12,0:12:36.12:0,36,501	0/0:14,0:14:39.09:0,39,510	0/0:10,0:10:30.07:0,30,398	0/0:26,0:26:75.24:0,75,1029	0/0:16,0:16:45.15:0,45,629	0/0:20,0:20:57.09:0,57,753	0/0:12,0:12:36.12:0,36,503	0/0:8,0:8:24.04:0,24,311	0/0:14,0:14:42.13:0,42,570	1/1:0,14:14:42.13:504,42,0	0/0:16,0:16:48.15:0,48,652	0/0:6,0:6:18.06:0,18,252	0/0:36,0:36:99:0,105,1386	0/0:5,0:5:15.05:0,15,210	0/0:14,0:14:39.12:0,39,527	0/0:22,0:22:63.12:0,63,834	0/0:19,0:19:57.18:0,57,779	0/0:11,0:11:33.07:0,33,438	0/0:18,0:16:54.18:0,54,753	0/0:9,0:9:27.09:0,27,378
chr10	97345377	.	CT	C	2079.98	PASS	AB=0.944;AC=14;AF=0.250;AN=56;BaseQRankSum=6.527;DP=569;FS=2.930;HRun=11;HaplotypeScore=67.6396;InbreedingCoeff=0.8094;MQ=72.70;MQ0=0;MQRankSum=-1.073;QD=12.02;ReadPosRankSum=1.280;VQSLOD=3.5636;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:41:61.37:0,61,354	0/0:6,0:6:15.02:0,15,152	0/0:16,0:13:15.58:0,16,162	0/1:17,0:14:10.13:10,0,102	0/0:20,1:21:29.45:0,29,501	0/0:15,0:15:39.10:0,39,416	0/0:25,2:28:19.74:0,20,597	0/0:17,1:18:11.38:0,11,314	0/0:13,0:13:33.04:0,33,324	0/0:19,0:19:18.90:0,19,388	0/0:8,0:8:18.05:0,18,191	0/0:29,0:29:75.08:0,75,749	0/0:31,0:32:77.89:0,78,750	0/0:21,2:24:13.85:0,14,507	0/0:20,1:21:26.46:0,26,468	0/1:14,2:16:7.26:7,0,304	0/0:22,0:22:60.13:0,60,625	1/1:7,24:33:72.98:578,73,0	1/1:10,8:18:23.93:197,24,0	1/1:3,8:11:20.95:172,21,0	1/1:4,16:22:45.84:356,46,0	0/0:18,0:18:45.10:0,45,467	0/0:11,0:11:30.04:0,30,304	0/0:27,0:29:68.13:0,68,723	0/0:18,0:18:44.77:0,45,448	1/1:4,24:28:20.92:530,21,0	1/1:7,21:28:50.88:419,51,0	0/0:7,0:7:18.01:0,18,175
chr10	97346812	.	AGAGAAG	A	928.67	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.488;DP=661;FS=2.080;HRun=0;HaplotypeScore=131.4314;InbreedingCoeff=0.9501;MQ=60.24;MQ0=3;MQRankSum=-6.664;QD=29.02;ReadPosRankSum=-0.552;VQSLOD=3.0736;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,23:32:51.07:1024,51,0	0/0:8,0:8:24.07:0,24,720	0/0:35,0:16:24.07:0,24,629	0/0:40,0:27:32.37:0,32,947	0/0:19,0:19:45.12:0,45,1175	0/0:12,0:12:33.10:0,33,1017	0/0:27,0:27:49.40:0,49,1328	0/0:32,0:32:47.95:0,48,1117	0/0:28,0:28:66.23:0,66,2139	0/0:37,0:37:93.31:0,93,2874	0/0:14,0:14:27.09:0,27,853	0/0:26,0:26:57.17:0,57,1659	0/0:32,0:32:75.25:0,75,2321	0/0:25,0:25:54.15:0,54,1691	0/0:30,0:30:75.24:0,75,2313	0/0:25,0:25:63.21:0,63,1971	0/0:16,0:16:39.11:0,39,1112	0/0:25,0:25:60.14:0,60,1705	0/0:14,0:11:12.04:0,12,334	0/0:20,0:19:48.12:0,48,1202	0/0:22,0:22:45.09:0,45,1359	0/0:13,0:13:33.10:0,33,921	0/0:17,0:17:39.13:0,39,1212	0/0:32,0:32:75.17:0,75,2203	0/0:25,0:25:63.20:0,63,1964	0/0:30,0:30:57.18:0,57,1614	0/0:17,0:17:39.13:0,39,1223	0/0:8,0:8:15.05:0,15,440
chr10	97346941	.	GA	G	11449.40	PASS	AB=0.885;AC=53;AF=0.946;AN=56;BaseQRankSum=-5.296;DP=398;FS=12.207;HRun=2;HaplotypeScore=53.6956;InbreedingCoeff=0.5070;MQ=71.27;MQ0=5;MQRankSum=-1.555;QD=31.20;ReadPosRankSum=3.981;VQSLOD=3.2490;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:57.18:737,57,0	1/1:0,3:3:6.02:78,6,0	0/1:20,3:12:57.14:57,0,164	0/0:31,0:13:8.72:0,9,203	1/1:0,8:8:21.07:273,21,0	1/1:0,4:4:9.03:116,9,0	1/1:2,14:16:45.14:578,45,0	1/1:5,16:20:45.09:552,45,0	1/1:0,15:15:42.14:545,42,0	1/1:2,13:15:36.12:466,36,0	1/1:0,13:13:36.12:467,36,0	1/1:1,19:20:57.19:740,57,0	1/1:0,11:11:24.08:311,24,0	1/1:0,13:13:36.12:467,36,0	1/1:0,9:9:27.09:350,27,0	1/1:1,13:14:33.06:428,33,0	1/1:0,8:8:18.06:230,18,0	1/1:1,8:9:14.87:298,15,0	1/1:1,8:8:21.05:257,21,0	1/1:0,7:7:18.06:234,18,0	1/1:4,26:31:75.04:951,75,0	1/1:0,11:11:30.10:389,30,0	1/1:1,7:8:21.07:273,21,0	1/1:1,27:28:69.20:878,69,0	1/1:0,12:12:33.11:428,33,0	1/1:0,15:15:45.12:566,45,0	1/1:0,9:9:27.09:350,27,0	1/1:1,12:13:33.11:428,33,0
chr10	97349504	.	A	AT	1172.73	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.937;DP=665;FS=0.000;HRun=0;HaplotypeScore=69.4139;InbreedingCoeff=0.9994;MQ=69.75;MQ0=3;MQRankSum=-0.625;QD=34.49;ReadPosRankSum=2.697;VQSLOD=3.2495;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:18:45.15:719,45,0	0/0:13,0:12:30.06:0,30,382	0/0:25,0:22:56.16:0,56,809	0/0:18,0:14:39.11:0,39,501	0/0:21,0:21:59.93:0,60,808	0/0:19,0:19:57.18:0,57,783	0/0:17,0:17:51.14:0,51,668	0/0:35,0:35:99:0,102,1396	0/0:30,0:30:90.27:0,90,1221	0/0:26,0:26:72.24:0,72,993	0/0:16,0:16:42.14:0,42,586	0/0:23,0:23:69.23:0,69,964	0/0:27,0:27:81.26:0,81,1116	0/0:22,0:22:63.21:0,63,878	0/0:31,0:31:84.27:0,84,1152	0/0:31,0:31:93.30:0,93,1273	0/0:18,0:18:48.12:0,48,630	1/1:0,14:13:36.12:575,36,0	0/0:21,0:21:63.21:0,63,879	0/0:33,0:33:81.27:0,81,1129	0/0:46,1:46:99:0,132,1846	0/0:18,0:18:48.16:0,48,670	0/0:28,0:28:81.27:0,81,1131	0/0:23,0:23:66.18:0,66,885	0/0:26,0:26:35.51:0,36,870	0/0:26,0:26:78.26:0,78,1091	0/0:25,0:25:72.22:0,72,982	0/0:12,0:12:33.09:0,33,435
chr10	97349811	.	GGGTGCTCCTCCTACATA	G	837.56	PASS	AB=0.875;AC=5;AF=0.093;AN=54;BaseQRankSum=2.601;DP=755;FS=0.000;HRun=0;HaplotypeScore=310.9178;InbreedingCoeff=-0.1025;MQ=56.28;MQ0=17;MQRankSum=-0.649;QD=3.76;ReadPosRankSum=-1.667;VQSLOD=1.7402;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:90.25:0,90,3157	0/0:16,0:16:30.09:0,30,928	./.	0/0:19,0:7:17.96:0,18,242	0/0:16,0:16:39.13:0,39,1212	0/0:22,0:22:54.14:0,54,1615	0/0:26,0:25:54.11:0,54,1530	0/0:26,0:26:69.21:0,69,1524	0/0:21,0:21:54.13:0,54,1704	0/0:25,0:25:60.15:0,60,2099	0/0:22,0:22:54.59:0,55,1481	0/0:28,0:28:78.22:0,78,2844	0/0:26,0:25:63.20:0,63,2277	0/0:21,0:21:45.15:0,45,1598	0/0:39,0:39:93.23:0,93,3107	0/0:29,0:29:69.19:0,69,2576	0/0:17,0:17:36.11:0,36,1146	0/0:21,0:20:48.10:0,48,1375	0/1:20,0:14:80.54:81,0,673	0/1:45,0:45:99:152,0,1877	0/1:73,0:70:99:169,0,2177	0/0:28,0:27:63.04:0,63,2211	0/0:25,0:24:60.18:0,60,2000	0/0:17,0:16:33.10:0,33,1190	0/0:19,0:18:39.10:0,39,1414	0/1:23,17:39:99:401,0,1354	0/1:23,22:42:99:152,0,794	0/0:11,0:11:30.08:0,30,951
chr10	97352136	.	CTG	C	1919.53	PASS	AB=0.864;AC=35;AF=0.648;AN=54;BaseQRankSum=-0.834;DP=568;FS=1.608;HRun=0;HaplotypeScore=93.5940;InbreedingCoeff=0.3769;MQ=64.83;MQ0=21;MQRankSum=3.236;QD=5.30;ReadPosRankSum=4.050;VQSLOD=2.8630;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:34:26.04:127,26,0	1/1:2,1:4:5.85:47,6,0	./.	0/0:36,0:18:3.01:0,3,45	1/1:6,0:9:6.02:66,6,0	1/1:9,3:13:8.86:80,9,0	0/1:15,8:24:23.92:127,0,24	1/1:30,1:30:5.76:94,6,0	1/1:9,5:13:8.86:80,9,0	0/1:15,0:15:44.72:45,0,191	0/0:7,0:7:9.03:0,9,125	1/1:14,11:27:23.63:227,24,0	1/1:11,3:14:5.96:52,6,0	1/1:10,8:21:29.39:254,29,0	1/1:19,1:21:17.67:147,18,0	0/1:14,0:14:70.14:72,0,70	1/1:17,19:35:24.06:265,24,0	1/1:14,0:22:14.16:68,14,0	0/0:19,0:19:11.93:0,12,106	0/0:7,0:7:9:0,9,81	0/0:45,0:45:2.74:0,3,12	1/1:6,1:7:3.01:33,3,0	1/1:5,1:6:3.01:33,3,0	1/1:11,8:21:14.71:127,15,0	0/1:13,3:15:54.30:54,0,77	0/0:22,0:21:19.26:0,19,187	0/0:23,0:23:14.48:0,14,109	0/1:8,4:12:25.57:99,0,26
chr10	97352156	.	G	GTGTGTGTGTT	2478.01	PASS	AB=0.581;AC=8;AF=0.143;AN=56;BaseQRankSum=-1.666;DP=589;FS=7.562;HRun=0;HaplotypeScore=160.2524;InbreedingCoeff=0.6140;MQ=51.19;MQ0=29;MQRankSum=-2.798;QD=19.98;ReadPosRankSum=-1.431;VQSLOD=1.9029;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:53.66:0,54,749	0/0:3,0:3:6.02:0,6,148	0/0:47,0:12:17.50:0,17,153	0/0:55,0:21:42.85:0,43,423	0/0:13,0:13:32.45:0,32,283	0/0:11,0:11:18.01:0,18,296	0/0:26,0:26:40.20:0,40,652	0/0:25,0:23:33.85:0,34,344	0/0:12,0:11:18.01:0,18,294	0/0:22,0:22:60.02:0,60,936	0/0:7,0:7:15:0,15,317	0/0:25,0:25:45.02:0,45,746	0/0:16,0:15:30.40:0,30,298	0/0:22,0:22:45.48:0,45,851	0/0:18,0:17:33.03:0,33,520	0/0:13,0:13:36.03:0,36,506	0/0:35,0:34:50.99:0,51,806	0/0:20,0:20:17.81:0,18,411	1/1:6,10:18:10:672,10,0	1/1:0,11:14:23.88:538,24,0	1/1:12,30:45:5.80:34,6,0	0/0:7,0:7:11.87:0,12,137	0/0:6,0:6:14.99:0,15,171	0/0:24,0:24:42:0,42,590	0/0:14,0:13:24.02:0,24,403	0/1:6,16:24:14.22:811,0,14	0/1:6,11:19:31.92:565,0,32	0/0:9,0:9:15.03:0,15,321
chr10	97352439	.	T	TG	936.87	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.212;DP=608;FS=18.441;HRun=2;HaplotypeScore=84.5742;InbreedingCoeff=0.9272;MQ=64.58;MQ0=2;MQRankSum=-8.272;QD=24.02;ReadPosRankSum=-0.892;VQSLOD=2.0738;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,16:26:48.12:658,48,0	0/0:3,0:3:9.03:0,9,112	0/0:20,0:15:41.89:0,42,438	0/0:9,0:8:20.87:0,21,214	0/0:15,0:15:39.11:0,39,470	0/0:21,0:21:60.18:0,60,731	0/0:37,0:37:99:0,105,1301	0/0:21,0:21:63.20:0,63,781	0/0:22,0:22:66.21:0,66,815	0/0:21,0:21:51.16:0,51,633	0/0:9,0:9:17.94:0,18,223	0/0:28,0:28:78.24:0,78,960	0/0:22,0:22:63.17:0,63,756	0/0:22,0:22:60.17:0,60,721	0/0:17,0:17:42.13:0,42,521	0/0:15,0:15:45.14:0,45,551	0/0:44,0:44:99:0,123,1511	1/1:3,10:13:30.09:401,30,0	0/0:21,0:20:60.14:0,60,705	0/0:12,0:11:27.08:0,27,335	0/0:87,0:86:99:0,240,2901	0/0:9,0:9:21.07:0,21,260	0/0:3,0:3:9.02:0,9,99	0/0:58,0:58:99:0,162,1976	0/0:13,0:13:36.09:0,36,426	0/0:17,0:17:51.16:0,51,632	0/0:17,0:17:45.14:0,45,557	0/0:5,0:5:15.05:0,15,186
chr10	97352450	.	G	GA	966.33	PASS	AB=0.711;AC=3;AF=0.054;AN=56;BaseQRankSum=7.745;DP=602;FS=13.454;HRun=0;HaplotypeScore=89.3461;InbreedingCoeff=-0.0574;MQ=66.39;MQ0=2;MQRankSum=-5.650;QD=17.90;ReadPosRankSum=-0.529;VQSLOD=4.9247;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,21:27:99:705,0,107	0/0:3,0:3:9.03:0,9,126	0/0:23,0:15:16.77:0,17,451	0/1:11,0:7:3.41:3,0,160	0/0:10,0:10:24.08:0,24,335	0/0:20,0:20:60.20:0,60,839	0/0:39,0:39:99:0,114,1590	0/0:20,0:20:54.16:0,54,715	0/0:23,0:23:66.21:0,66,905	0/0:20,0:20:48.16:0,48,671	0/0:6,0:6:14.80:0,15,208	0/0:25,0:25:69.22:0,69,950	0/0:19,0:19:57.18:0,57,778	0/0:20,0:20:57.15:0,57,756	0/0:15,0:15:39.13:0,39,545	0/0:16,0:16:48.15:0,48,646	0/0:42,0:42:99:0,126,1740	0/1:4,12:16:92.57:350,0,93	0/0:20,0:19:57.19:0,57,795	0/0:12,0:11:21.07:0,21,292	0/0:91,0:90:99:0,253,3430	0/0:6,0:6:12.04:0,12,168	0/0:3,0:3:9.03:0,9,126	0/0:62,0:62:99:0,178,2435	0/0:15,0:15:39.13:0,39,545	0/0:16,0:16:42.13:0,42,572	0/0:15,0:15:42.12:0,42,570	0/0:7,0:7:21.07:0,21,294
chr10	97352844	.	TG	T	416.70	PASS	AB=0.560;AC=2;AF=0.036;AN=56;BaseQRankSum=6.156;DP=556;FS=4.729;HRun=3;HaplotypeScore=73.0798;InbreedingCoeff=0.0082;MQ=64.85;MQ0=3;MQRankSum=-5.896;QD=14.88;ReadPosRankSum=0.252;VQSLOD=2.9383;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:3,11:13:21.19:202,0,21	0/0:7,0:7:18.06:0,18,259	0/0:9,0:6:15.05:0,15,205	0/0:22,0:17:36.83:0,37,530	0/0:10,0:10:27.09:0,27,387	0/0:10,0:10:30.10:0,30,430	0/0:42,0:40:99:0,116,1619	0/0:13,0:12:36.12:0,36,518	0/0:25,0:24:72.24:0,72,1031	0/0:21,0:20:54.18:0,54,778	0/0:5,0:5:15.05:0,15,216	0/0:30,0:29:84.19:0,84,1138	0/0:11,0:11:30.07:0,30,432	0/0:28,0:28:78.23:0,78,1081	0/0:26,0:26:72.24:0,72,1036	0/0:19,0:19:39.32:0,39,759	0/0:35,0:35:99:0,99,1398	0/1:3,11:14:12.77:304,0,13	0/0:7,0:7:21.07:0,21,302	0/0:5,0:5:9.03:0,9,129	0/0:67,1:63:99:0,174,2453	0/0:15,0:15:33.02:0,33,413	0/0:7,0:7:18.05:0,18,241	0/0:59,0:58:99:0,166,2356	0/0:18,0:18:51.11:0,51,690	0/0:18,0:17:39.13:0,39,562	0/0:7,0:7:12.04:0,12,167	0/0:11,0:11:33.11:0,33,475
chr10	97352854	.	T	TG	231.12	PASS	AB=0.807;AC=2;AF=0.036;AN=56;BaseQRankSum=5.866;DP=612;FS=6.999;HRun=2;HaplotypeScore=87.8046;InbreedingCoeff=-0.0435;MQ=62.29;MQ0=9;MQRankSum=-4.992;QD=5.37;ReadPosRankSum=-0.872;VQSLOD=0.0416;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:17,8:24:99:139,0,204	0/0:9,0:9:15.03:0,15,172	0/0:12,0:4:12.01:0,12,125	0/0:24,0:18:21.70:0,22,460	0/0:10,0:10:15.05:0,15,186	0/0:10,0:10:27.08:0,27,333	0/0:47,0:45:99:0,126,1527	0/0:16,0:15:36.11:0,36,443	0/0:28,0:27:78.23:0,78,952	0/0:17,0:16:33.10:0,33,409	0/0:6,0:6:14.97:0,15,157	0/0:34,1:34:51.33:0,51,1054	0/0:12,0:12:33.10:0,33,409	0/0:29,0:29:70.08:0,70,834	0/0:28,0:28:81.25:0,81,998	0/0:20,0:20:54.07:0,54,618	0/0:36,1:37:67.36:0,67,1234	0/1:15,3:18:99:181,0,189	0/0:10,0:7:21.07:0,21,255	0/0:6,0:6:12.04:0,12,149	0/0:82,1:76:99:0,111,2037	0/0:12,0:12:13.20:0,13,163	0/0:8,0:8:18.06:0,18,221	0/0:56,0:55:99:0,150,1837	0/0:18,0:18:37.36:0,37,449	0/0:22,0:21:38.56:0,39,435	0/0:5,0:5:15.05:0,15,181	0/0:8,0:8:18.06:0,18,223
chr10	97357152	.	TA	T	514.04	PASS	AB=0.929;AC=5;AF=0.089;AN=56;BaseQRankSum=6.716;DP=513;FS=4.924;HRun=9;HaplotypeScore=52.1158;InbreedingCoeff=0.7934;MQ=78.07;MQ0=0;MQRankSum=-1.286;QD=13.18;ReadPosRankSum=1.509;VQSLOD=3.1605;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:54.03:494,54,0	0/0:5,0:5:15.04:0,15,173	0/0:18,1:18:41.91:0,42,428	0/1:12,1:13:2.45:2,0,213	0/0:31,0:31:50.80:0,51,808	0/0:27,0:27:75.05:0,75,837	0/0:13,0:13:30.09:0,30,346	0/0:33,0:35:99:0,99,1093	0/0:15,0:15:39.12:0,39,450	0/0:25,0:25:69.18:0,69,768	0/0:31,0:31:84.24:0,84,961	0/0:17,0:17:45.12:0,45,509	0/0:19,0:19:54.16:0,54,622	0/0:14,1:15:5.71:0,6,319	0/0:15,0:15:36.10:0,36,408	0/0:16,0:16:45.13:0,45,519	0/0:21,0:21:57.12:0,57,627	1/1:1,5:6:15.01:137,15,0	0/0:23,0:23:60.17:0,60,685	0/0:19,0:19:51.14:0,51,580	0/0:16,0:16:42.12:0,42,484	0/0:12,0:12:36.10:0,36,407	0/0:16,0:16:45.13:0,45,518	0/0:23,0:22:57.17:0,57,658	0/0:16,0:16:42.11:0,42,475	0/0:18,0:18:51.15:0,51,589	0/0:19,0:19:51.15:0,51,589	0/0:8,0:8:24.07:0,24,277
chr10	97357758	.	A	AAC	2501.28	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.558;DP=1161;FS=6.196;HRun=0;HaplotypeScore=155.0463;InbreedingCoeff=0.9112;MQ=64.65;MQ0=3;MQRankSum=-1.346;QD=37.90;ReadPosRankSum=-1.521;VQSLOD=3.9837;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,36:44:81.69:1799,82,0	0/0:10,0:10:27.08:0,27,334	0/0:45,0:29:3.23:0,3,449	0/0:43,0:32:44.38:0,44,489	0/0:24,0:24:60.19:0,60,771	0/0:35,0:35:80.65:0,81,1027	0/0:42,0:42:97.16:0,97,1241	0/0:53,0:52:99:0,117,1445	0/0:42,0:42:99:0,108,1344	0/0:64,0:64:99:0,159,1975	0/0:25,0:25:60.19:0,60,772	0/0:56,0:56:99:0,152,1883	0/0:45,0:45:99:0,126,1605	0/0:47,0:47:99:0,120,1503	0/0:56,0:56:99:0,147,1846	0/0:33,0:32:84.23:0,84,1039	0/0:37,0:37:42.29:0,42,940	1/1:6,16:22:15.60:821,16,0	0/0:33,0:32:90.28:0,90,1134	0/0:35,0:35:93.28:0,93,1168	0/0:108,0:107:99:0,256,3138	0/0:56,0:56:99:0,144,1826	0/0:21,0:21:60.18:0,60,756	0/0:65,0:65:99:0,147,1886	0/0:39,0:39:84.14:0,84,1099	0/0:43,0:43:99:0,114,1442	0/0:15,0:15:30.10:0,30,384	0/0:23,0:23:60.07:0,60,701
chr10	97358034	.	AC	A	20106.71	PASS	AB=0.759;AC=53;AF=0.946;AN=56;BaseQRankSum=-3.474;DP=773;FS=3.177;HRun=3;HaplotypeScore=203.3255;InbreedingCoeff=-0.0291;MQ=56.77;MQ0=6;MQRankSum=0.425;QD=26.01;ReadPosRankSum=2.808;VQSLOD=3.8808;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,31:33:54.26:905,54,0	1/1:0,7:7:15.05:186,15,0	0/1:13,2:4:15.83:16,0,32	0/1:14,2:6:28.31:28,0,30	1/1:0,26:26:78.25:967,78,0	1/1:3,21:24:57.18:707,57,0	1/1:2,22:21:32.64:408,33,0	1/1:5,34:31:66.21:817,66,0	1/1:5,36:40:75.22:929,75,0	1/1:0,28:28:84.25:1028,84,0	1/1:3,22:25:63.20:778,63,0	1/1:1,33:34:90.15:1115,90,0	1/1:2,29:30:48.15:594,48,0	1/1:0,30:30:74.76:929,75,0	1/1:2,32:33:63.20:781,63,0	1/1:0,27:27:54.17:669,54,0	1/1:2,19:19:54.17:669,54,0	1/1:2,14:16:19.23:445,19,0	1/1:3,9:8:18.06:223,18,0	1/1:2,28:30:64.44:784,64,0	1/1:10,64:70:99:2007,165,0	1/1:1,38:39:95.92:1190,96,0	1/1:0,17:16:30.09:372,30,0	1/1:8,32:39:87.26:1064,87,0	1/1:1,21:22:54.17:669,54,0	1/1:4,33:35:91.11:1146,91,0	1/1:0,16:16:33.10:409,33,0	0/1:2,10:12:1.59:270,0,2
chr10	97358058	.	T	TAC	171.17	PASS	AB=0.645;AC=1;AF=0.018;AN=56;BaseQRankSum=5.358;DP=952;FS=20.543;HRun=0;HaplotypeScore=319.0344;InbreedingCoeff=-0.0231;MQ=60.75;MQ0=6;MQRankSum=-4.457;QD=8.56;ReadPosRankSum=-2.336;VQSLOD=1.8719;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:84.71:0,85,1190	0/0:11,0:11:30.10:0,30,441	0/0:43,0:19:4.68:0,5,496	0/0:38,0:24:21.86:0,22,631	0/0:35,0:35:99:0,102,1491	0/0:25,0:25:69.23:0,69,1000	0/0:35,0:33:71.84:0,72,996	0/0:44,0:44:99:0,108,1536	0/0:40,0:41:64.58:0,65,1414	0/0:49,0:49:99:0,126,1823	0/0:26,0:26:66.22:0,66,970	0/0:38,0:38:99:0,102,1484	0/0:33,0:33:69.21:0,69,991	0/0:34,0:34:93.31:0,93,1377	0/0:34,0:34:84.27:0,84,1212	0/0:31,0:31:72.21:0,72,1014	0/0:30,0:29:66.46:0,66,1129	0/1:9,11:20:99:246,0,119	0/0:26,0:24:51.16:0,51,727	0/0:37,0:37:83.59:0,84,1206	0/0:82,0:81:99:0,163,2706	0/0:45,0:45:99:0,114,1673	0/0:19,0:18:42.12:0,42,597	0/0:45,1:46:66.58:0,67,1527	0/0:27,0:27:66.21:0,66,967	0/0:36,0:36:99:0,103,1472	0/0:16,0:16:42.14:0,42,608	0/0:11,0:11:33.04:0,33,439
chr10	97358108	.	A	AAC	836.20	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.310;DP=933;FS=18.581;HRun=0;HaplotypeScore=201.8235;InbreedingCoeff=0.9862;MQ=58.79;MQ0=11;MQRankSum=-6.427;QD=16.08;ReadPosRankSum=-3.842;VQSLOD=1.4929;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,4:38:58.31:680,58,0	0/0:10,0:10:24.07:0,24,293	0/0:52,0:29:17.45:0,17,324	0/0:52,0:23:44.37:0,44,465	0/0:23,0:23:60.16:0,60,723	0/0:24,0:24:62.01:0,62,761	0/0:48,0:47:99:0,123,1518	0/0:36,0:36:69.20:0,69,854	0/0:52,0:52:99:0,126,1504	0/0:48,0:48:99:0,111,1390	0/0:17,0:17:39:0,39,471	0/0:35,0:35:84.06:0,84,1089	0/0:31,0:31:72.15:0,72,879	0/0:24,0:24:60.18:0,60,748	0/0:31,0:31:72.20:0,72,875	0/0:26,0:26:69.18:0,69,827	0/0:37,0:36:75.66:0,76,1176	1/1:10,2:12:23.09:277,23,0	0/0:25,0:24:44.91:0,45,516	0/0:32,0:32:69.22:0,69,875	0/0:66,0:65:99:0,153,1853	0/0:32,0:32:75.18:0,75,909	0/0:21,0:21:53.90:0,54,649	0/0:53,0:53:99:0,123,1532	0/0:29,0:29:57.02:0,57,698	0/0:34,0:33:84.19:0,84,1033	0/0:27,0:27:69.20:0,69,852	0/0:16,0:16:15.92:0,16,413
chr10	97360649	.	TG	T	2350.46	PASS	AB=0.835;AC=13;AF=0.232;AN=56;BaseQRankSum=5.538;DP=534;FS=6.026;HRun=9;HaplotypeScore=62.4248;InbreedingCoeff=0.7436;MQ=81.70;MQ0=0;MQRankSum=-1.392;QD=14.97;ReadPosRankSum=0.601;VQSLOD=3.6456;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,3:35:28.45:0,28,758	0/1:10,1:10:3.40:3,0,207	0/0:23,0:23:48.94:0,49,451	0/1:15,0:14:0.48:0,0,227	0/0:15,0:15:6.31:0,6,300	0/0:20,0:20:54.15:0,54,614	0/0:26,0:26:72.21:0,72,831	0/0:12,0:12:12.03:0,12,131	0/0:14,0:14:36.09:0,36,398	0/0:19,0:18:32.15:0,32,360	0/0:10,0:10:27.08:0,27,312	0/0:20,0:20:51.15:0,51,588	0/0:15,0:15:32.14:0,32,379	0/0:17,0:17:45.12:0,45,509	0/0:17,0:17:42.02:0,42,466	0/0:9,0:9:24.07:0,24,277	0/0:43,0:43:99:0,117,1341	1/1:6,26:32:75.04:686,75,0	1/1:4,12:16:38.61:337,39,0	1/1:3,12:15:26.95:239,27,0	1/1:14,26:40:75.03:686,75,0	0/0:13,0:13:20.97:0,21,217	0/0:16,0:16:39.10:0,39,440	0/0:32,0:33:93.10:0,93,1043	0/0:16,0:16:42.12:0,42,485	0/1:3,7:10:10.63:164,0,11	1/1:2,16:18:45.02:412,45,0	0/0:4,0:4:9.03:0,9,103
chr10	97360950	.	AAACCAAAACCAC	A	1379.99	PASS	AB=0.813;AC=10;AF=0.179;AN=56;BaseQRankSum=7.123;DP=607;FS=0.000;HRun=0;HaplotypeScore=207.1799;InbreedingCoeff=0.6511;MQ=76.38;MQ0=3;MQRankSum=-1.148;QD=15.51;ReadPosRankSum=-0.403;VQSLOD=2.6036;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,117,4645	0/0:7,0:7:15.02:0,15,421	0/0:45,0:30:29.02:0,29,412	0/0:41,0:29:50.18:0,50,802	0/0:17,0:17:45.15:0,45,2053	0/0:14,0:14:21.06:0,21,910	0/0:24,0:24:33.08:0,33,1094	0/0:24,0:24:31.33:0,31,603	0/0:22,0:22:51.17:0,51,2459	0/0:24,0:24:57.18:0,57,2615	0/0:11,0:11:27.09:0,27,1431	0/0:23,0:23:48.16:0,48,2171	0/0:23,0:23:54.19:0,54,2770	0/0:20,0:20:48.12:0,48,2311	0/0:22,0:22:48.16:0,48,2437	0/0:16,0:16:36.12:0,36,1607	0/0:35,0:35:78.24:0,78,3698	0/0:29,0:29:69.21:0,69,3130	1/1:9,8:17:23.22:460,23,0	1/1:7,9:16:20.89:345,21,0	1/1:8,9:17:2.97:20,3,0	0/0:14,0:14:24.08:0,24,943	0/0:19,0:19:36.12:0,36,1638	0/0:27,0:27:51.16:0,51,2147	0/0:14,0:14:30.10:0,30,1527	0/1:6,9:15:22.12:577,0,22	1/1:10,11:21:3.01:104,3,0	0/1:3,0:3:26.80:27,0,282
chr10	97361969	.	GGA	G	679.10	PASS	AB=0.986;AC=29;AF=0.580;AN=50;BaseQRankSum=1.447;DP=441;FS=51.425;HRun=0;HaplotypeScore=62.9110;InbreedingCoeff=0.4053;MQ=65.05;MQ0=29;MQRankSum=1.819;QD=2.74;ReadPosRankSum=0.659;VQSLOD=-0.0726;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:16:1.82:0,2,5	1/1:7,0:6:9.01:84,9,0	./.	./.	1/1:11,0:11:2.96:19,3,0	1/1:13,3:16:3.01:32,3,0	1/1:19,0:18:3.01:32,3,0	./.	1/1:13,0:15:14.69:112,15,0	1/1:16,0:13:3:27,3,0	0/1:16,0:16:32.35:33,0,32	1/1:8,6:14:3:32,3,0	1/1:10,0:14:8.86:79,9,0	1/1:15,0:15:14.69:118,15,0	0/1:21,0:22:32.50:54,0,33	0/1:19,0:18:19.36:19,0,226	0/0:10,0:15:9:0,9,94	0/0:3,0:3:5.98:0,6,58	0/0:13,0:12:12.21:0,12,60	0/0:10,0:9:0.47:0,0,1	0/0:25,0:23:9:0,9,91	1/1:12,0:12:2.99:24,3,0	1/1:10,0:9:3.01:32,3,0	1/1:15,10:27:8.69:60,9,0	1/1:13,0:12:8.96:82,9,0	0/0:17,0:16:20.82:0,21,171	0/0:12,0:12:8.97:0,9,86	0/0:9,0:6:6.45:0,6,48
chr10	97366870	.	GACAGACAGAA	G	2877.56	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=7.298;DP=700;FS=9.595;HRun=0;HaplotypeScore=213.0122;InbreedingCoeff=0.7974;MQ=78.16;MQ0=2;MQRankSum=-1.356;QD=18.21;ReadPosRankSum=-0.353;VQSLOD=1.7092;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:41:2.94:18,3,0	0/0:7,0:7:12.04:0,12,331	0/0:37,0:32:23.72:0,24,562	0/0:51,0:46:42.24:0,42,799	0/0:21,0:21:33.11:0,33,1078	0/0:16,0:16:27.09:0,27,844	0/0:26,0:26:39.13:0,39,1231	0/0:27,0:27:42.14:0,42,1111	0/0:22,0:22:42.14:0,42,1372	0/0:23,0:23:55.98:0,56,1620	0/0:24,0:24:45.15:0,45,1315	0/0:25,0:25:42.14:0,42,1244	0/0:31,0:31:42.13:0,42,1265	0/0:23,0:23:36.12:0,36,1183	0/0:31,0:31:54.19:0,54,1726	0/0:28,0:28:57.19:0,57,1741	0/0:36,0:36:68.97:0,69,2059	1/1:5,0:3:3.01:43,3,0	1/1:16,6:22:18.01:295,18,0	1/1:23,0:23:24.08:660,24,0	1/1:19,0:19:19.33:587,19,0	0/0:28,0:28:48.16:0,48,1376	0/0:22,0:22:27.08:0,27,613	0/0:44,0:43:96.29:0,96,2826	0/0:13,0:13:21.07:0,21,574	0/1:16,0:16:88.89:475,0,89	1/1:31,0:31:41.96:976,42,0	0/0:5,0:5:6.02:0,6,211
chr10	97366888	.	GAAACAGACAGAA	G	672.09	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=8.175;DP=671;FS=12.705;HRun=0;HaplotypeScore=246.1052;InbreedingCoeff=0.2474;MQ=77.70;MQ0=3;MQRankSum=-0.818;QD=4.31;ReadPosRankSum=6.256;VQSLOD=0.7798;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:36:6.02:91,6,0	0/0:5,0:5:15.04:0,15,587	0/0:45,0:37:95.72:0,96,2138	0/0:66,0:50:99:0,122,2806	0/0:20,0:20:51.16:0,51,2057	0/0:15,0:15:45.15:0,45,1811	0/0:21,0:21:63.19:0,63,2403	0/0:28,0:28:84.20:0,84,2730	0/0:18,0:18:51.17:0,51,2440	0/0:22,0:22:66.23:0,66,2863	0/0:24,0:24:72.19:0,72,2624	0/0:24,0:24:63.22:0,63,2656	0/0:20,0:20:60.21:0,60,2421	0/0:24,0:24:69.23:0,69,2595	0/0:24,0:24:69.23:0,69,3104	0/0:26,0:26:78.26:0,78,3243	0/0:34,0:34:99:0,99,3922	1/1:3,0:4:3.15:157,3,0	0/1:15,0:15:3.61:4,0,301	0/1:28,0:28:99:132,0,623	0/1:23,0:22:99:128,0,513	0/0:25,0:25:72.25:0,72,2835	0/0:12,0:12:33.11:0,33,1237	0/0:42,0:41:99:0,114,5135	0/0:14,0:14:39.06:0,39,1331	0/1:17,0:17:88.02:88,0,552	0/1:30,0:30:99:207,0,220	0/0:5,0:5:15.05:0,15,484
chr10	97366898	.	GAA	G	1444.08	PASS	AB=0.767;AC=9;AF=0.161;AN=56;BaseQRankSum=7.943;DP=662;FS=9.306;HRun=3;HaplotypeScore=119.1006;InbreedingCoeff=0.3532;MQ=71.00;MQ0=10;MQRankSum=-0.934;QD=9.32;ReadPosRankSum=3.458;VQSLOD=-0.0455;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,14:37:0.39:40,0,0	0/0:4,0:4:12.04:0,12,231	0/0:46,0:30:61.78:0,62,980	0/0:71,0:44:88.83:0,89,1443	0/0:16,0:16:45.15:0,45,850	0/0:16,0:16:48.15:0,48,875	0/0:22,0:22:66.17:0,66,1227	0/0:28,0:28:81.18:0,81,1473	0/0:17,0:17:51.16:0,51,952	0/0:24,0:23:67.97:0,68,1111	0/0:19,0:19:54.18:0,54,989	0/0:20,0:20:60.20:0,60,1104	0/0:20,0:20:57.12:0,57,985	0/0:24,0:24:63.20:0,63,1153	0/0:26,0:26:75.26:0,75,1434	0/0:25,0:25:72.24:0,72,1343	0/0:35,0:35:99:0,102,1810	1/1:5,1:4:3.03:69,3,0	0/1:17,0:14:99:126,0,252	0/1:14,11:24:99:311,0,270	0/1:16,11:26:99:259,0,630	0/0:24,0:24:69.06:0,69,1204	0/0:10,0:10:27.08:0,27,478	0/0:40,0:39:99:0,117,2166	0/0:11,0:11:27.09:0,27,484	0/1:8,6:14:99:259,0,233	1/1:5,23:28:13.96:523,14,0	0/0:7,0:7:21.07:0,21,405
chr10	97366920	.	GAC	G	462.21	PASS	AB=0.935;AC=25;AF=0.500;AN=50;BaseQRankSum=2.528;DP=611;FS=14.461;HRun=0;HaplotypeScore=108.1002;InbreedingCoeff=0.0975;MQ=54.48;MQ0=19;MQRankSum=0.257;QD=1.27;ReadPosRankSum=1.179;VQSLOD=1.2181;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:10.77:0,11,52	1/1:1,1:2:3.01:32,3,0	./.	./.	1/1:16,2:18:8.51:57,9,0	0/1:16,1:18:18.70:19,0,70	0/0:26,1:26:18.07:0,18,259	./.	1/1:20,2:21:14.99:145,15,0	0/0:13,0:16:7.37:0,7,63	0/0:17,0:17:15.49:0,15,180	0/1:27,0:26:14.34:14,0,125	0/1:18,1:19:17.47:17,0,123	0/1:26,1:27:33.37:33,0,188	1/1:19,7:26:8.81:76,9,0	1/1:18,2:20:8.69:75,9,0	0/1:38,1:41:0.49:0,0,411	1/1:6,0:5:2.60:10,3,0	1/1:17,0:14:5.68:28,6,0	0/1:19,0:19:7.41:7,0,20	0/0:31,0:29:3:0,3,26	0/0:22,0:22:19.82:0,20,262	0/1:4,0:4:16.93:24,0,17	0/1:40,0:38:0.65:1,0,285	0/0:16,0:16:11.80:0,12,106	0/1:16,0:21:0.56:18,0,1	0/1:19,0:20:13.02:13,0,40	0/1:7,2:9:48.75:49,0,95
chr10	97367398	.	T	TA	5277.55	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-9.013;DP=497;FS=5.920;HRun=4;HaplotypeScore=43.9398;InbreedingCoeff=0.9781;MQ=68.34;MQ0=0;MQRankSum=0.534;QD=37.17;ReadPosRankSum=1.568;VQSLOD=4.7863;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:14:33.11:451,33,0	0/0:9,0:9:27.05:0,27,294	0/0:5,0:5:9.03:0,9,102	0/0:7,0:7:15.04:0,15,167	0/0:32,0:31:87.25:0,87,987	0/0:27,0:27:78.19:0,78,865	0/0:8,0:8:21.06:0,21,238	0/0:39,0:39:99:0,102,1118	0/0:18,0:18:51.11:0,51,559	0/0:19,0:19:54.15:0,54,613	0/0:25,0:25:69.20:0,69,783	0/0:11,0:11:30.08:0,30,340	0/0:22,0:22:60.17:0,60,681	0/0:15,0:15:45.13:0,45,510	0/0:18,0:18:51.15:0,51,578	0/0:11,0:11:33.07:0,33,356	0/0:21,0:21:63.18:0,63,714	1/1:0,11:11:33.11:451,33,0	1/1:3,21:24:63.18:843,63,0	1/1:1,23:24:69.19:924,69,0	1/1:0,12:12:36.12:493,36,0	0/0:6,0:6:18.05:0,18,204	0/0:10,0:10:24.05:0,24,261	0/0:13,0:13:36.10:0,36,408	0/0:34,0:34:96.27:0,96,1088	1/1:1,26:27:78.24:1049,78,0	1/1:1,29:30:78.26:1067,78,0	0/0:5,0:5:12.03:0,12,136
chr10	97367634	.	CT	C	516.85	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.425;DP=595;FS=5.484;HRun=8;HaplotypeScore=54.9216;InbreedingCoeff=0.9211;MQ=81.56;MQ0=0;MQRankSum=-2.499;QD=19.14;ReadPosRankSum=-0.538;VQSLOD=3.2534;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:45.07:434,45,0	0/0:9,0:9:27.08:0,27,326	0/0:18,0:18:39.12:0,39,480	0/0:18,0:17:3.88:0,4,291	0/0:27,0:28:81.07:0,81,939	0/0:27,0:27:72.22:0,72,870	0/0:12,0:12:30.08:0,30,345	0/0:30,0:30:75.22:0,75,894	0/0:35,0:35:99:0,102,1219	0/0:29,0:29:78.24:0,78,941	0/0:18,0:18:48.15:0,48,579	0/0:27,0:27:66.20:0,66,797	0/0:23,0:23:60.18:0,60,725	0/0:14,0:15:41.98:0,42,473	0/0:24,0:24:63.17:0,63,739	0/0:33,0:33:93.28:0,93,1114	0/0:15,0:15:45.14:0,45,544	1/1:2,8:10:21.03:203,21,0	0/0:19,0:19:45.14:0,45,544	0/0:22,0:22:57.16:0,57,677	0/0:22,0:22:63.18:0,63,749	0/0:16,0:16:39.12:0,39,471	0/0:19,0:19:54.17:0,54,652	0/0:10,0:10:24.07:0,24,290	0/0:32,0:32:93.29:0,93,1123	0/0:28,0:28:75.23:0,75,906	0/0:31,0:31:81.25:0,81,977	0/0:8,0:8:21.06:0,21,254
chr10	97371404	.	G	GA	1807.27	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-6.326;DP=400;FS=7.275;HRun=1;HaplotypeScore=77.9389;InbreedingCoeff=0.8049;MQ=74.24;MQ0=0;MQRankSum=-1.946;QD=17.55;ReadPosRankSum=1.529;VQSLOD=3.6345;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:7.02:0,7,128	0/0:6,0:6:11.86:0,12,104	0/0:18,0:16:5.30:0,5,241	0/0:12,0:11:2.83:0,3,225	0/0:16,0:16:23.07:0,23,300	0/0:9,0:9:11.76:0,12,88	0/0:23,0:23:56.71:0,57,562	0/0:14,0:14:29.76:0,30,255	0/0:18,0:18:27.94:0,28,330	0/0:10,0:10:12.04:0,12,167	0/1:10,0:10:3.54:4,0,159	0/0:12,0:12:27.40:0,27,317	0/0:13,0:13:20.78:0,21,228	0/0:15,0:15:17.94:0,18,178	0/0:11,0:11:26.78:0,27,259	0/0:10,0:10:15.44:0,15,125	0/0:19,0:19:47.78:0,48,480	0/0:7,0:7:14.86:0,15,102	1/1:6,11:17:36:374,36,0	1/1:6,17:23:34.80:444,35,0	1/1:3,13:16:15.01:204,15,0	0/0:10,0:10:14.88:0,15,146	0/0:8,0:8:14.90:0,15,165	0/0:22,0:21:42.19:0,42,391	0/0:17,0:17:29.80:0,30,318	1/1:2,13:15:33.64:335,34,0	1/1:7,15:22:49.27:619,49,0	0/0:9,0:9:20.74:0,21,171
chr10	97374352	.	C	CTTGGCTGATGAT	5569.03	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.303;DP=778;FS=0.000;HRun=0;HaplotypeScore=257.3796;InbreedingCoeff=0.9984;MQ=84.80;MQ0=0;MQRankSum=-9.973;QD=113.65;ReadPosRankSum=-1.507;VQSLOD=4.3570;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,11:34:66.23:3698,66,0	0/0:9,0:9:27.09:0,27,964	0/0:26,0:27:75.19:0,75,1803	0/0:23,0:24:51.22:0,51,1238	0/0:40,0:40:99:0,111,3449	0/0:22,0:22:66.21:0,66,2305	0/0:25,0:25:72.23:0,72,2419	0/0:28,0:28:75.25:0,75,2461	0/0:30,0:30:90.29:0,90,3054	0/0:31,0:31:75.25:0,75,2432	0/0:23,0:23:63.17:0,63,1971	0/0:36,0:36:99:0,108,3776	0/0:45,0:45:99:0,129,4345	0/0:28,0:28:69.24:0,69,2461	0/0:35,0:34:99:0,102,3622	0/0:39,0:39:99:0,99,3287	0/0:21,0:21:54.17:0,54,1747	1/1:10,4:15:36.12:1871,36,0	0/0:28,0:28:45.48:0,45,2006	0/0:35,0:35:84.27:0,84,2921	0/0:21,0:21:57.20:0,57,2045	0/0:28,0:28:66.23:0,66,2275	0/0:28,0:28:66.21:0,66,2035	0/0:29,0:29:78.25:0,78,2756	0/0:38,0:38:99:0,102,3522	0/0:25,0:25:66.21:0,66,2215	0/0:26,0:26:75.26:0,75,2646	0/0:8,0:8:24.08:0,24,841
chr10	97374828	.	GTGCGTA	G	323.06	PASS	AB=0.954;AC=6;AF=0.107;AN=56;BaseQRankSum=7.664;DP=791;FS=1.641;HRun=0;HaplotypeScore=200.2375;InbreedingCoeff=0.1307;MQ=51.01;MQ0=18;MQRankSum=-5.501;QD=2.78;ReadPosRankSum=-1.221;VQSLOD=2.6742;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:24:2.68:9,3,0	0/0:12,0:12:36.12:0,36,1159	0/0:63,0:33:83.65:0,84,2338	0/0:59,0:25:65.92:0,66,1920	0/0:29,0:29:78.20:0,78,2448	0/0:13,0:13:33.11:0,33,1097	0/0:34,0:34:93.26:0,93,2901	0/0:37,0:35:84.29:0,84,2773	0/0:30,0:30:87.17:0,87,2719	0/0:26,0:24:63.03:0,63,2088	0/0:12,0:12:33.11:0,33,1177	0/0:35,0:35:95.87:0,96,2899	0/0:21,0:21:60.19:0,60,1721	0/0:24,0:24:69.24:0,69,2345	0/0:17,0:17:51.15:0,51,1555	0/0:38,0:38:99:0,102,3310	0/0:23,0:21:51.18:0,51,1672	0/1:14,0:13:99:222,0,157	0/0:19,0:18:21.14:0,21,1062	0/1:21,2:22:51.44:51,0,772	0/0:53,0:50:48.56:0,49,1497	0/0:23,0:23:60.21:0,60,1947	0/0:29,0:29:78.27:0,78,2603	0/0:41,0:41:99:0,105,3492	0/0:23,0:23:66.19:0,66,2098	0/1:24,0:21:60.27:60,0,1083	0/1:23,3:25:96.52:97,0,1067	0/0:14,0:14:39.13:0,39,1249
chr10	97374834	.	ATGTGTGAAT	A	59.69	PASS	AB=0.944;AC=3;AF=0.054;AN=56;BaseQRankSum=2.529;DP=800;FS=5.857;HRun=0;HaplotypeScore=242.5450;InbreedingCoeff=0.3871;MQ=50.45;MQ0=17;MQRankSum=-2.164;QD=1.39;ReadPosRankSum=-0.380;VQSLOD=2.0953;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,6:22:0.43:20,0,0	0/0:12,0:12:36.12:0,36,1280	0/0:62,0:32:89.85:0,90,3148	0/0:62,0:27:70.79:0,71,2348	0/0:25,0:25:72.25:0,72,3259	0/0:14,0:14:42.13:0,42,1706	0/0:31,0:31:93.32:0,93,4194	0/0:33,0:31:87.30:0,87,3813	0/0:32,0:32:93.32:0,93,4018	0/0:24,0:23:65.98:0,66,2721	0/0:12,0:12:33.11:0,33,1513	0/0:31,0:31:88.82:0,89,3725	0/0:20,0:20:60.21:0,60,2427	0/0:27,0:27:78.27:0,78,3361	0/0:17,0:17:51.17:0,51,2180	0/0:38,0:38:99:0,105,4411	0/0:25,0:23:57.20:0,57,2683	0/1:13,1:15:99:128,0,510	0/0:19,0:17:51.17:0,51,1690	0/0:21,0:21:44.59:0,45,921	0/0:55,0:52:65.19:0,65,1522	0/0:24,0:24:64.44:0,64,2593	0/0:32,0:32:90.31:0,90,3929	0/0:42,0:42:99:0,114,5111	0/0:24,0:24:66.23:0,66,2907	0/0:31,0:27:68.81:0,69,1995	0/0:27,0:26:63.12:0,63,1564	0/0:17,0:17:48.16:0,48,2013
chr10	97374852	.	GT	G	824.19	PASS	AB=0.833;AC=6;AF=0.107;AN=56;BaseQRankSum=9.060;DP=826;FS=1.922;HRun=1;HaplotypeScore=138.5507;InbreedingCoeff=-0.1261;MQ=48.22;MQ0=32;MQRankSum=-8.853;QD=4.43;ReadPosRankSum=-1.924;VQSLOD=-0.3715;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:26:2.99:0,3,47	0/0:9,0:9:27.07:0,27,375	0/0:56,0:18:54.01:0,54,829	0/0:59,0:23:20.94:0,21,867	0/0:22,0:22:54.18:0,54,844	0/0:20,0:19:46.97:0,47,705	0/0:28,0:28:81.27:0,81,1276	0/0:40,0:37:99:0,102,1507	0/0:37,0:36:96.11:0,96,1480	0/0:27,0:24:66.19:0,66,1003	0/0:12,0:11:30.10:0,30,465	0/0:29,1:30:76.86:0,77,1153	0/0:22,0:22:57.18:0,57,877	0/0:25,0:23:66.22:0,66,995	0/0:16,0:16:45.14:0,45,694	0/0:34,0:33:93.30:0,93,1438	0/0:29,0:27:66.22:0,66,1028	0/1:20,0:19:11.59:12,0,236	0/1:20,5:20:99:222,0,394	0/1:16,4:20:21.02:21,0,361	0/1:48,12:56:99:142,0,370	0/0:26,0:26:60.20:0,60,917	0/0:29,0:29:75.24:0,75,1150	0/0:45,0:45:99:0,120,1843	0/0:25,1:26:69.10:0,69,1045	0/1:26,9:28:99:274,0,516	0/1:15,11:26:99:276,0,315	0/0:14,0:14:39.13:0,39,613
chr10	97374854	.	AGT	A	629.62	PASS	AB=0.907;AC=20;AF=0.385;AN=52;BaseQRankSum=4.025;DP=831;FS=1.176;HRun=0;HaplotypeScore=148.8184;InbreedingCoeff=-0.4570;MQ=47.92;MQ0=34;MQRankSum=2.362;QD=1.35;ReadPosRankSum=-0.087;VQSLOD=2.1987;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:28:5.30:28,5,0	0/1:9,0:9:10.82:11,0,166	./.	./.	0/1:19,2:21:81.34:81,0,100	0/1:20,0:19:68.86:69,0,246	0/1:28,1:29:36.23:36,0,331	0/1:44,0:40:24.28:24,0,164	0/0:38,0:37:11.10:0,11,539	0/0:26,0:23:24.08:0,24,352	0/1:12,0:11:11.45:11,0,118	0/1:26,2:29:47.83:48,0,481	0/1:19,3:22:27.27:27,0,428	0/1:21,4:23:57.37:57,0,454	0/0:15,0:15:21.06:0,21,297	0/0:30,2:33:24.01:0,24,745	0/1:21,7:27:71.48:71,0,408	0/1:10,0:19:11.82:31,0,12	0/0:25,0:23:0.66:0,1,244	0/1:16,2:21:7.14:7,0,301	0/0:56,0:57:20.66:0,21,411	0/1:25,1:25:4.51:5,0,335	0/1:23,1:26:41.34:41,0,411	0/0:43,2:45:36.96:0,37,894	0/1:23,4:27:56.65:57,0,477	0/1:27,3:28:51.48:51,0,457	0/1:20,1:25:1.09:1,0,329	0/1:9,4:14:99:120,0,145
chr10	97375934	.	AGT	A	5742.57	PASS	AB=0.738;AC=14;AF=0.250;AN=56;BaseQRankSum=14.732;DP=919;FS=1.882;HRun=0;HaplotypeScore=112.4099;InbreedingCoeff=0.7863;MQ=68.64;MQ0=8;MQRankSum=0.747;QD=20.51;ReadPosRankSum=1.372;VQSLOD=5.4297;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,28:42:84.71:1012,85,0	0/0:15,0:15:36.11:0,36,551	0/0:45,1:28:45.96:0,46,594	0/0:33,1:27:18.84:0,19,671	0/0:26,0:26:63.20:0,63,991	0/0:17,0:17:42.13:0,42,657	0/1:31,4:35:11.99:12,0,1044	0/0:40,0:40:84.26:0,84,1251	0/0:32,2:34:4.90:0,5,1069	0/0:31,0:31:11.19:0,11,1137	0/0:17,0:17:42.14:0,42,673	0/0:40,2:42:38.03:0,38,1616	0/0:42,1:43:70.88:0,71,1591	0/0:41,0:41:99:0,102,1645	0/0:42,0:42:96.33:0,96,1523	0/0:54,0:53:99:0,135,2116	0/0:30,2:31:35.54:0,36,1032	1/1:9,15:24:47.61:585,48,0	1/1:16,10:23:26.87:306,27,0	1/1:4,22:25:45.14:550,45,0	1/1:6,56:61:99:1687,138,0	0/0:27,1:28:29.60:0,30,978	0/0:27,0:27:63.20:0,63,985	0/0:33,0:33:75.26:0,75,1211	0/0:23,0:23:54.17:0,54,848	0/1:9,24:33:64.83:770,0,65	1/1:7,24:32:69.05:820,69,0	0/0:14,0:14:42.08:0,42,597
chr10	97376090	.	CGT	C	2461.53	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=12.878;DP=1053;FS=6.781;HRun=0;HaplotypeScore=135.9310;InbreedingCoeff=0.9979;MQ=62.80;MQ0=8;MQRankSum=-0.632;QD=28.29;ReadPosRankSum=2.339;VQSLOD=5.1220;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,56:61:99:1984,145,0	0/0:15,0:15:45.15:0,45,789	0/0:39,0:22:37.16:0,37,602	0/0:44,0:31:32.60:0,33,902	0/0:24,0:24:69.24:0,69,1197	0/0:20,0:20:54.16:0,54,905	0/0:35,0:35:93.32:0,93,1615	0/0:40,0:40:99:0,108,1871	0/0:56,0:56:99:0,144,2496	0/0:39,0:39:99:0,114,1946	0/0:21,0:21:60.21:0,60,1051	0/0:56,0:56:99:0,150,2565	0/0:50,0:50:99:0,141,2424	0/0:43,0:43:99:0,129,2246	0/0:43,0:43:99:0,105,1802	0/0:50,0:50:99:0,141,2426	0/0:23,0:24:63.19:0,63,1074	1/1:4,21:25:41.97:600,42,0	0/0:31,0:30:78.22:0,78,1238	0/0:32,0:32:93.32:0,93,1624	0/0:103,0:103:99:0,283,4665	0/0:33,0:33:87.30:0,87,1507	0/0:20,0:20:51.13:0,51,825	0/0:33,0:33:84.27:0,84,1411	0/0:35,0:35:84.28:0,84,1441	0/0:41,0:41:99:0,114,1917	0/0:28,0:27:81.21:0,81,1377	0/0:11,0:11:21.54:0,22,369
chr10	97380164	.	TGACTGGGGA	T	2918.25	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.461;DP=672;FS=19.101;HRun=0;HaplotypeScore=189.9509;InbreedingCoeff=0.9709;MQ=80.58;MQ0=0;MQRankSum=-9.723;QD=52.11;ReadPosRankSum=-0.230;VQSLOD=2.1412;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,34:43:75.26:2287,75,0	0/0:5,0:5:15.05:0,15,654	0/0:16,0:16:48.16:0,48,2117	0/0:20,0:20:54.18:0,54,2400	0/0:19,0:19:51.18:0,51,2291	0/0:28,0:28:81.26:0,81,3785	0/0:21,0:21:54.16:0,54,2391	0/0:33,0:33:90.31:0,90,4154	0/0:27,0:27:75.26:0,75,3644	0/0:29,0:29:87.30:0,87,4027	0/0:16,0:16:48.16:0,48,2198	0/0:30,0:30:90.31:0,90,4275	0/0:36,0:36:99:0,105,4911	0/0:36,0:36:99:0,108,5082	0/0:30,0:30:90.31:0,90,4367	0/0:30,0:30:84.29:0,84,4040	0/0:27,0:27:75.22:0,75,3181	1/1:2,11:13:27.02:752,27,0	0/0:27,0:27:81.28:0,81,3768	0/0:7,0:7:18.06:0,18,871	0/0:51,0:51:99:0,147,6720	0/0:12,0:12:33.11:0,33,1602	0/0:8,0:8:24.08:0,24,1157	0/0:34,0:34:99:0,99,4316	0/0:18,0:18:54.19:0,54,2598	0/0:27,0:27:78.26:0,78,3514	0/0:24,0:24:72.25:0,72,3422	0/0:5,0:5:12.04:0,12,582
chr10	97380876	.	GA	G	1460.21	PASS	AB=0.829;AC=13;AF=0.232;AN=56;BaseQRankSum=6.747;DP=622;FS=17.675;HRun=13;HaplotypeScore=69.3473;InbreedingCoeff=0.2785;MQ=74.48;MQ0=1;MQRankSum=-0.440;QD=6.24;ReadPosRankSum=1.672;VQSLOD=0.7389;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,3:27:24.44:24,0,363	0/0:8,0:8:21.03:0,21,204	0/1:21,0:16:20.73:21,0,97	0/1:18,0:17:9.37:9,0,184	0/0:15,2:21:11.25:0,11,356	0/0:24,1:32:52.53:0,53,608	0/0:22,0:22:60.10:0,60,583	0/0:19,2:25:3.21:0,3,361	0/0:25,1:26:41.18:0,41,552	0/1:21,3:24:8.66:9,0,400	0/0:15,1:20:29.27:0,29,406	0/0:19,1:20:29.59:0,30,432	0/0:16,0:18:45.31:0,45,444	0/0:20,0:20:27.42:0,27,404	0/0:19,2:22:13.11:0,13,437	0/0:25,1:27:38.01:0,38,510	0/1:11,4:18:38.66:39,0,263	0/0:9,0:14:20.61:0,21,119	0/1:10,12:23:21.61:220,0,22	1/1:2,23:25:30.41:387,30,0	0/1:4,15:20:23.50:168,0,23	0/0:22,2:24:32.12:0,32,453	0/0:24,1:25:38.18:0,38,528	0/0:17,3:21:8.59:0,9,367	0/0:24,0:24:51.09:0,51,572	1/1:9,26:35:65.06:469,65,0	1/1:5,18:23:38.73:284,39,0	0/0:16,1:19:24.23:0,24,385
chr10	97381175	.	A	ACCAG	2545.79	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.935;DP=563;FS=5.882;HRun=0;HaplotypeScore=95.4520;InbreedingCoeff=0.9918;MQ=94.67;MQ0=0;MQRankSum=-7.799;QD=62.09;ReadPosRankSum=0.681;VQSLOD=5.6162;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:27:54.19:1539,54,0	0/0:5,0:5:15.05:0,15,315	0/0:26,0:26:75.23:0,75,1427	0/0:27,0:27:69.24:0,69,1419	0/0:19,0:19:57.20:0,57,1192	0/0:15,0:15:45.14:0,45,905	0/0:23,0:23:69.24:0,69,1447	0/0:27,0:27:78.25:0,78,1561	0/0:15,0:15:42.14:0,42,881	0/0:26,0:26:78.27:0,78,1625	0/0:17,0:17:48.16:0,48,982	0/0:20,0:20:60.21:0,60,1253	0/0:15,0:15:45.15:0,45,902	0/0:17,0:17:51.18:0,51,1069	0/0:18,0:18:54.17:0,54,1086	0/0:21,0:21:63.20:0,63,1278	0/0:25,0:25:75.21:0,75,1493	1/1:1,12:14:39.13:1128,39,0	0/0:26,0:26:75.23:0,75,1462	0/0:18,0:18:54.17:0,54,1095	0/0:21,0:21:63.22:0,63,1305	0/0:15,0:15:45.15:0,45,905	0/0:21,0:21:60.21:0,60,1254	0/0:18,0:18:54.18:0,54,1103	0/0:21,0:21:63.22:0,63,1318	0/0:27,0:27:81.28:0,81,1693	0/0:26,0:26:72.23:0,72,1453	0/0:13,0:13:39.13:0,39,818
chr10	97381498	.	TG	T	1774.32	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.949;DP=741;FS=0.000;HRun=3;HaplotypeScore=75.9780;InbreedingCoeff=0.9975;MQ=80.29;MQ0=0;MQRankSum=-3.158;QD=33.48;ReadPosRankSum=1.404;VQSLOD=4.0635;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:81.25:1004,81,0	0/0:8,0:8:21.05:0,21,283	0/0:22,0:22:55.36:0,55,789	0/0:18,0:18:45.05:0,45,573	0/0:24,0:24:72.20:0,72,981	0/0:18,0:18:54.18:0,54,778	0/0:32,0:32:90.30:0,90,1296	0/0:26,0:26:75.24:0,75,1062	0/0:32,0:32:93.31:0,93,1335	0/0:30,0:30:84.16:0,84,1149	0/0:11,0:11:33.11:0,33,468	0/0:44,0:44:99:0,132,1897	0/0:37,0:37:99:0,105,1505	0/0:34,0:34:93.31:0,93,1338	0/0:24,0:24:69.22:0,69,976	0/0:26,0:26:75.24:0,75,1058	0/0:35,0:35:99:0,105,1472	1/1:1,24:25:72.23:892,72,0	0/0:23,0:23:66.22:0,66,949	0/0:27,0:27:81.27:0,81,1159	0/0:55,0:55:99:0,163,2311	0/0:24,0:24:66.22:0,66,950	0/0:16,0:16:42.14:0,42,605	0/0:23,0:23:69.23:0,69,985	0/0:24,0:24:66.19:0,66,909	0/0:31,0:31:84.28:0,84,1198	0/0:34,0:33:99:0,102,1428	0/0:10,0:10:30.09:0,30,417
chr10	97385383	.	AATTCTTAAGTAGCCAT	A	1147.73	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.029;DP=435;FS=7.299;HRun=0;HaplotypeScore=186.9497;InbreedingCoeff=0.9822;MQ=82.76;MQ0=1;MQRankSum=-4.973;QD=104.34;ReadPosRankSum=1.227;VQSLOD=2.8223;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.21:0,72,4572	0/0:6,0:6:18.06:0,18,1232	0/0:19,0:19:51.17:0,51,3280	0/0:10,0:10:23.82:0,24,1641	0/0:16,0:16:42.14:0,42,3036	0/0:14,0:14:36.12:0,36,2210	0/0:15,0:15:42.14:0,42,3048	0/0:20,0:19:54.19:0,54,3529	0/0:11,0:11:30.10:0,30,2027	0/0:17,0:17:48.16:0,48,2992	0/0:9,0:9:27.08:0,27,1804	0/0:11,0:11:33.11:0,33,2102	0/0:14,0:14:42.14:0,42,3134	0/0:19,0:19:51.18:0,51,4026	0/0:16,0:16:45.15:0,45,3530	0/0:19,0:19:54.19:0,54,3574	0/0:25,0:25:75.26:0,75,5536	1/1:2,9:10:27.09:1242,27,0	0/0:15,0:15:39.13:0,39,2197	0/0:14,0:14:42.14:0,42,1999	0/0:21,0:21:57.20:0,57,3858	0/0:10,0:10:24.08:0,24,1728	0/0:15,0:15:33.11:0,33,2473	0/0:20,0:20:60.19:0,60,4065	0/0:14,0:14:30.10:0,30,1680	0/0:10,0:10:24.08:0,24,1893	0/0:26,0:26:72.25:0,72,5257	0/0:13,0:13:39.13:0,39,3073
chr10	97385510	.	A	AT	2853.32	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-0.852;DP=562;FS=0.000;HRun=9;HaplotypeScore=91.2165;InbreedingCoeff=0.9333;MQ=74.59;MQ0=0;MQRankSum=-3.165;QD=23.98;ReadPosRankSum=0.855;VQSLOD=3.9273;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:74.83:0,75,640	0/0:11,0:11:26.97:0,27,230	0/0:12,0:12:14.08:0,14,196	0/0:13,0:13:25.99:0,26,207	0/0:24,0:24:56.97:0,57,495	0/0:22,0:22:56.98:0,57,495	0/0:14,0:14:35.98:0,36,313	0/0:31,1:32:38.52:0,39,566	0/0:13,0:13:26.99:0,27,234	0/0:29,0:29:74.97:0,75,649	0/0:22,2:24:35.82:0,36,534	0/0:14,0:14:35.96:0,36,307	0/0:14,0:14:12.55:0,13,263	0/0:13,2:15:1.96:0,2,252	0/0:14,0:14:38.99:0,39,339	0/0:26,0:27:64.60:0,65,549	0/0:12,0:12:32.99:0,33,286	0/0:19,0:19:47.99:0,48,417	1/1:6,15:21:57.14:616,57,0	1/1:8,22:30:40.12:671,40,0	1/1:0,6:7:17.88:180,18,0	0/0:21,0:21:56.97:0,57,491	0/0:28,0:28:59.95:0,60,517	0/0:19,0:20:41.96:0,42,359	0/0:21,0:21:56.99:0,57,495	1/1:6,12:18:13.05:372,13,0	1/1:5,36:43:99:1186,107,0	0/0:12,0:12:17.99:0,18,156
chr10	97386887	.	TGGA	T	1747.75	PASS	AB=0.595;AC=3;AF=0.054;AN=56;BaseQRankSum=11.395;DP=714;FS=1.875;HRun=0;HaplotypeScore=115.9833;InbreedingCoeff=0.6565;MQ=79.42;MQ0=0;MQRankSum=-11.386;QD=26.89;ReadPosRankSum=-0.953;VQSLOD=3.7809;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,33:40:92.99:1224,93,0	0/0:12,0:12:36.12:0,36,815	0/0:19,0:19:50.52:0,51,1028	0/0:18,0:18:45.15:0,45,931	0/0:23,0:23:66.23:0,66,1469	0/0:22,0:22:66.21:0,66,1451	0/0:33,0:33:93.32:0,93,2084	0/0:28,0:28:72.25:0,72,1618	0/0:19,0:19:57.20:0,57,1225	0/0:24,0:24:72.25:0,72,1632	0/0:20,0:20:57.20:0,57,1290	0/0:35,0:35:99:0,102,2311	0/0:48,0:48:99:0,138,3106	0/0:34,0:34:99:0,99,2184	0/0:37,0:37:99:0,108,2432	0/0:14,0:14:36.12:0,36,816	0/0:33,0:33:96.30:0,96,2110	0/1:8,17:25:16.84:630,0,17	0/0:26,0:26:75.26:0,75,1678	0/0:21,0:21:60.21:0,60,1359	0/0:23,0:23:66.23:0,66,1473	0/0:29,0:29:78.27:0,78,1735	0/0:12,0:12:36.12:0,36,796	0/0:38,0:38:99:0,105,2353	0/0:23,0:23:69.24:0,69,1547	0/0:23,0:23:66.23:0,66,1478	0/0:26,0:26:72.20:0,72,1560	0/0:9,0:9:27.09:0,27,589
chr10	97386897	.	TCATC	T	2263.19	PASS	AB=0.528;AC=3;AF=0.054;AN=56;BaseQRankSum=11.584;DP=711;FS=2.576;HRun=0;HaplotypeScore=128.9552;InbreedingCoeff=0.6478;MQ=80.76;MQ0=0;MQRankSum=-11.513;QD=43.52;ReadPosRankSum=-1.337;VQSLOD=4.0025;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:90.56:1455,91,0	0/0:13,0:13:39.13:0,39,1068	0/0:17,0:17:48.14:0,48,1081	0/0:22,0:22:54.18:0,54,1239	0/0:24,0:24:72.25:0,72,2014	0/0:21,0:21:63.22:0,63,1748	0/0:34,0:34:99:0,102,2710	0/0:27,0:27:81.27:0,81,2187	0/0:17,0:17:51.18:0,51,1375	0/0:28,0:28:84.29:0,84,2264	0/0:19,0:19:57.18:0,57,1532	0/0:33,0:33:96.32:0,96,2614	0/0:48,0:48:99:0,138,3781	0/0:34,0:34:99:0,102,2704	0/0:36,0:36:99:0,105,2879	0/0:13,0:13:39.13:0,39,1090	0/0:33,0:33:96.31:0,96,2588	0/1:2,17:19:26.75:914,0,27	0/0:32,0:32:93.30:0,93,2489	0/0:21,0:21:60.21:0,60,1676	0/0:25,0:25:75.23:0,75,1918	0/0:24,0:24:69.24:0,69,1913	0/0:14,0:14:42.14:0,42,1140	0/0:37,0:37:99:0,111,3086	0/0:27,0:27:81.28:0,81,2247	0/0:23,0:23:69.24:0,69,1920	0/0:29,0:29:84.29:0,84,2325	0/0:8,0:8:24.08:0,24,671
chr10	97386900	.	TC	T	541.25	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=11.383;DP=714;FS=0.000;HRun=2;HaplotypeScore=90.8711;InbreedingCoeff=0.9693;MQ=79.57;MQ0=0;MQRankSum=-10.999;QD=9.50;ReadPosRankSum=-1.118;VQSLOD=0.8295;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:83.06:445,83,0	0/0:14,0:14:42.14:0,42,615	0/0:15,0:15:39.10:0,39,519	0/0:22,0:22:56.92:0,57,645	0/0:26,0:26:78.26:0,78,1164	0/0:21,0:21:63.21:0,63,944	0/0:33,0:33:96.30:0,96,1417	0/0:27,0:27:81.25:0,81,1163	0/0:19,0:19:54.17:0,54,783	0/0:28,0:28:84.28:0,84,1256	0/0:18,0:18:54.16:0,54,767	0/0:33,0:33:99:0,99,1408	0/0:46,0:46:99:0,135,1998	0/0:32,0:32:96.33:0,96,1438	0/0:36,0:36:99:0,105,1535	0/0:14,0:14:42.13:0,42,608	0/0:31,0:31:93.27:0,93,1348	1/1:18,4:22:9.21:211,9,0	0/0:33,0:33:96.30:0,96,1381	0/0:20,0:20:60.19:0,60,879	0/0:23,0:23:69.22:0,69,1013	0/0:24,0:24:72.22:0,72,1036	0/0:16,0:16:45.13:0,45,653	0/0:39,0:39:99:0,117,1729	0/0:27,0:27:81.26:0,81,1191	0/0:24,0:24:72.23:0,72,1060	0/0:28,0:28:84.28:0,84,1258	0/0:8,0:8:24.08:0,24,359
chr10	97388588	.	TAA	T	864.79	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.254;DP=656;FS=4.179;HRun=12;HaplotypeScore=86.5850;InbreedingCoeff=0.9929;MQ=77.80;MQ0=1;MQRankSum=-4.349;QD=18.02;ReadPosRankSum=2.826;VQSLOD=3.1668;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,16:30:53.99:529,54,0	0/0:7,0:7:18.06:0,18,266	0/0:18,0:18:24.49:0,24,229	0/0:21,0:21:21.96:0,22,256	0/0:26,0:28:77.64:0,78,987	0/0:19,0:20:50.64:0,51,705	0/0:22,0:22:63.16:0,63,896	0/0:35,0:37:84.14:0,84,1143	0/0:20,0:20:54.11:0,54,718	0/0:28,0:30:68.20:0,68,938	0/0:20,0:20:47.99:0,48,642	0/0:21,0:24:59.67:0,60,823	0/0:32,0:32:75.16:0,75,1015	0/0:15,0:16:38.62:0,39,545	0/0:31,0:32:86.71:0,87,1145	0/0:21,0:23:56.14:0,56,739	0/0:32,0:32:88.47:0,88,1176	1/1:1,16:17:45.10:458,45,0	0/0:18,0:21:41.06:0,41,496	0/0:16,0:18:38.08:0,38,473	0/0:19,0:20:45.10:0,45,579	0/0:12,0:14:32.32:0,32,454	0/0:26,0:27:72.21:0,72,991	0/0:29,0:29:81.22:0,81,1111	0/0:24,0:27:53.64:0,54,718	0/0:34,0:34:86.92:0,87,1220	0/0:20,0:22:65.53:0,66,894	0/0:12,0:12:36.11:0,36,517
chr10	97388666	.	G	GGTCCCCAGTT	4482.20	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.084;DP=643;FS=4.309;HRun=0;HaplotypeScore=180.5063;InbreedingCoeff=0.9997;MQ=61.59;MQ0=3;MQRankSum=-9.209;QD=109.32;ReadPosRankSum=-1.619;VQSLOD=4.6456;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,15:28:63.17:2940,63,0	0/0:16,0:16:45.15:0,45,1422	0/0:20,0:13:33.11:0,33,1034	0/0:28,0:22:56.90:0,57,1697	0/0:30,0:30:87.30:0,87,2840	0/0:24,0:24:72.24:0,72,2326	0/0:25,0:25:72.25:0,72,2388	0/0:28,0:28:81.26:0,81,2494	0/0:20,0:20:60.21:0,60,1945	0/0:23,0:23:69.22:0,69,1986	0/0:24,0:24:69.24:0,69,2217	0/0:31,0:31:90.26:0,90,2720	0/0:21,0:21:60.20:0,60,1927	0/0:20,0:20:60.21:0,60,1916	0/0:28,0:28:84.28:0,84,2729	0/0:20,0:20:60.21:0,60,1891	0/0:19,0:19:57.20:0,57,1852	1/1:5,8:13:36.07:1542,36,0	0/0:16,0:16:42.13:0,42,1274	0/0:20,0:20:60.19:0,60,1839	0/0:31,0:30:93.32:0,93,3029	0/0:16,0:16:45.15:0,45,1445	0/0:16,0:16:42.14:0,42,1321	0/0:34,0:34:93.32:0,93,3020	0/0:23,0:23:69.24:0,69,2271	0/0:25,0:25:75.21:0,75,2231	0/0:27,0:27:81.26:0,81,2582	0/0:17,0:17:51.18:0,51,1701
chr10	97389149	.	C	CT	3911.38	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-11.410;DP=764;FS=0.000;HRun=1;HaplotypeScore=76.2624;InbreedingCoeff=0.9998;MQ=80.12;MQ0=0;MQRankSum=-2.419;QD=41.17;ReadPosRankSum=3.465;VQSLOD=4.0541;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,58:58:99:2427,163,0	0/0:15,0:15:45.13:0,45,568	0/0:22,0:22:55.94:0,56,673	0/0:20,0:20:46.47:0,46,541	0/0:16,0:16:45.15:0,45,584	0/0:17,0:17:48.14:0,48,602	0/0:34,0:34:99:0,99,1284	0/0:25,0:25:72.23:0,72,921	0/0:25,0:25:75.24:0,75,973	0/0:21,0:21:63.20:0,63,817	0/0:12,0:12:36.12:0,36,467	0/0:39,0:39:99:0,117,1510	0/0:33,0:33:93.30:0,93,1206	0/0:28,0:28:84.27:0,84,1088	0/0:24,0:24:69.22:0,69,895	0/0:40,0:40:99:0,120,1527	0/0:40,0:40:99:0,120,1556	1/1:0,37:37:99:1484,99,0	0/0:26,0:26:75.21:0,75,931	0/0:27,0:27:78.25:0,78,1012	0/0:50,0:50:99:0,141,1814	0/0:20,0:20:57.19:0,57,738	0/0:19,0:19:57.18:0,57,734	0/0:28,0:28:84.27:0,84,1089	0/0:13,0:13:36.12:0,36,468	0/0:36,0:35:93.29:0,93,1180	0/0:24,0:24:72.22:0,72,918	0/0:15,0:15:45.15:0,45,584
chr10	97389259	.	A	AT	1561.73	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.689;DP=617;FS=1.375;HRun=3;HaplotypeScore=63.4886;InbreedingCoeff=0.9147;MQ=93.94;MQ0=0;MQRankSum=-5.197;QD=30.62;ReadPosRankSum=-0.059;VQSLOD=3.1805;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:33:66.17:989,66,0	0/0:8,0:8:24.08:0,24,335	0/0:25,0:25:75.24:0,75,1021	0/0:32,0:31:82.87:0,83,1016	0/0:10,0:10:27.08:0,27,360	0/0:16,0:16:48.16:0,48,664	0/0:38,0:38:99:0,111,1515	0/0:25,0:25:57.17:0,57,750	0/0:28,0:28:84.25:0,84,1137	0/0:22,0:22:57.17:0,57,743	0/0:12,0:12:30.08:0,30,401	0/0:24,0:24:72.22:0,72,989	0/0:26,0:26:75.25:0,75,1047	0/0:33,0:33:96.31:0,96,1325	0/0:37,0:37:99:0,111,1547	0/0:30,0:30:87.29:0,87,1210	0/0:27,0:27:81.23:0,81,1096	1/1:0,18:17:45.15:694,45,0	0/0:20,0:20:60.19:0,60,805	0/0:11,0:11:33.11:0,33,461	0/0:31,0:31:93.29:0,93,1282	0/0:15,0:15:33.11:0,33,461	0/0:13,0:13:36.59:0,37,504	0/0:29,0:29:87.27:0,87,1198	0/0:14,0:14:42.14:0,42,586	0/0:18,0:18:45.14:0,45,613	0/0:21,0:21:63.20:0,63,863	0/0:1,0:1:3.01:0,3,42
chr10	97389355	.	AATGCAACTC	A	2261.35	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.456;DP=706;FS=0.000;HRun=0;HaplotypeScore=204.9082;InbreedingCoeff=0.9989;MQ=87.12;MQ0=0;MQRankSum=-8.587;QD=62.82;ReadPosRankSum=1.329;VQSLOD=3.2034;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:27:54.19:1649,54,0	0/0:13,0:13:39.13:0,39,1894	0/0:20,0:20:60.20:0,60,2597	0/0:29,0:29:84.29:0,84,3428	0/0:17,0:17:51.18:0,51,2465	0/0:20,0:20:60.21:0,60,2960	0/0:24,0:24:72.24:0,72,3442	0/0:24,0:24:66.23:0,66,3045	0/0:23,0:23:69.23:0,69,3203	0/0:27,0:27:81.27:0,81,3679	0/0:13,0:13:39.13:0,39,1871	0/0:37,0:37:99:0,111,5361	0/0:28,0:28:84.29:0,84,4011	0/0:34,0:34:99:0,99,4809	0/0:41,0:41:99:0,123,6072	0/0:46,0:46:99:0,138,6671	0/0:40,0:40:99:0,120,5935	1/1:0,8:8:24.08:734,24,0	0/0:23,0:23:69.24:0,69,3167	0/0:19,0:19:57.20:0,57,2854	0/0:31,0:31:93.32:0,93,4483	0/0:19,0:19:54.19:0,54,2632	0/0:21,0:21:63.22:0,63,3127	0/0:26,0:26:78.27:0,78,3908	0/0:23,0:23:69.24:0,69,3457	0/0:24,0:24:72.25:0,72,3525	0/0:30,0:30:90.30:0,90,4311	0/0:18,0:18:54.19:0,54,2546
chr10	97389478	.	AGG	A	1498.47	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.181;DP=661;FS=2.094;HRun=5;HaplotypeScore=95.0391;InbreedingCoeff=0.9996;MQ=89.26;MQ0=0;MQRankSum=-5.762;QD=24.97;ReadPosRankSum=0.031;VQSLOD=2.2042;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,40:43:78.26:1078,78,0	0/0:13,0:13:36.12:0,36,653	0/0:21,0:21:54.15:0,54,929	0/0:29,0:29:69.14:0,69,1144	0/0:16,0:16:42.13:0,42,726	0/0:22,0:22:63.22:0,63,1137	0/0:29,0:29:84.26:0,84,1433	0/0:26,0:26:66.19:0,66,1087	0/0:19,0:19:57.20:0,57,1031	0/0:27,0:27:75.71:0,76,1285	0/0:13,0:13:39.13:0,39,688	0/0:26,0:26:72.25:0,72,1309	0/0:33,0:33:96.30:0,96,1695	0/0:30,0:30:84.27:0,84,1466	0/0:22,0:22:66.23:0,66,1206	0/0:27,0:27:78.25:0,78,1363	0/0:22,0:22:66.22:0,66,1176	1/1:0,17:17:39.13:542,39,0	0/0:24,0:24:66.23:0,66,1191	0/0:27,0:28:77.41:0,77,1306	0/0:27,0:27:78.26:0,78,1400	0/0:23,0:23:48.16:0,48,869	0/0:14,0:14:42.14:0,42,765	0/0:12,0:12:30.10:0,30,544	0/0:22,0:22:60.20:0,60,1067	0/0:23,0:23:63.22:0,63,1154	0/0:37,0:37:99:0,108,1908	0/0:16,0:16:45.14:0,45,795
chr10	97389797	.	TC	T	3445.43	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.154;DP=629;FS=1.213;HRun=8;HaplotypeScore=93.6366;InbreedingCoeff=0.9512;MQ=73.66;MQ0=0;MQRankSum=0.186;QD=23.60;ReadPosRankSum=0.735;VQSLOD=3.9382;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:57.03:0,57,640	0/0:5,0:5:15.04:0,15,171	0/0:20,0:18:29.68:0,30,348	0/0:22,0:21:25.48:0,25,278	0/0:13,0:13:36.11:0,36,434	0/0:16,0:16:48.06:0,48,561	0/0:28,0:28:69.21:0,69,833	0/0:18,0:18:42.13:0,42,504	0/0:15,0:15:39.11:0,39,459	0/0:21,0:21:57.17:0,57,681	0/0:11,0:11:24.06:0,24,278	0/0:33,0:33:90.25:0,90,1057	0/0:24,0:24:66.19:0,66,787	0/0:21,0:21:60.16:0,60,709	0/0:22,0:22:63.19:0,63,761	0/0:33,0:33:93.26:0,93,1110	0/0:39,0:39:99:0,105,1251	0/0:21,0:21:38.93:0,39,428	1/1:1,20:21:60.08:573,60,0	1/1:1,24:25:72.12:695,72,0	1/1:4,52:56:99:1119,117,0	0/0:19,0:19:51.10:0,51,588	0/0:10,0:10:30.08:0,30,351	0/0:38,0:38:99:0,99,1162	0/0:12,0:12:30.08:0,30,349	1/1:3,13:16:2.82:311,3,0	1/1:1,27:28:78.11:747,78,0	0/0:7,0:7:21.06:0,21,254
chr10	97389824	.	G	GGTCACACCACAT	6146.42	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.564;DP=592;FS=4.249;HRun=0;HaplotypeScore=215.0838;InbreedingCoeff=0.9788;MQ=65.24;MQ0=1;MQRankSum=-9.696;QD=111.75;ReadPosRankSum=0.654;VQSLOD=4.7989;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,16:32:58.84:3211,59,0	0/0:5,0:5:12.03:0,12,328	0/0:17,0:12:23.38:0,23,520	0/0:29,0:22:47.36:0,47,1173	0/0:10,0:10:27.08:0,27,808	0/0:15,0:15:45.07:0,45,1325	0/0:23,0:23:63.18:0,63,2141	0/0:16,0:16:42.14:0,42,1554	0/0:13,0:13:33.10:0,33,1137	0/0:21,0:21:60.19:0,60,1974	0/0:7,0:7:21.07:0,21,768	0/0:26,0:26:78.24:0,78,2622	0/0:20,0:20:57.18:0,57,1899	0/0:24,0:24:72.22:0,72,2409	0/0:27,0:27:72.22:0,72,2377	0/0:32,0:32:90.31:0,90,3321	0/0:29,0:29:84.19:0,84,2911	1/1:4,15:23:27.22:2935,27,0	0/0:17,0:17:48.16:0,48,1679	0/0:18,0:18:48.15:0,48,1614	0/0:57,0:57:99:0,129,3877	0/0:18,0:18:51.15:0,51,1595	0/0:11,0:11:33.07:0,33,1121	0/0:38,0:38:99:0,102,3697	0/0:14,0:14:42.06:0,42,1412	0/0:18,0:18:48.12:0,48,1731	0/0:24,0:24:72.17:0,72,2215	0/0:8,0:8:24.08:0,24,912
chr10	97390960	.	TA	T	746.16	PASS	AB=0.783;AC=5;AF=0.089;AN=56;BaseQRankSum=7.077;DP=653;FS=3.197;HRun=11;HaplotypeScore=68.8268;InbreedingCoeff=0.3658;MQ=70.67;MQ0=0;MQRankSum=-1.048;QD=8.68;ReadPosRankSum=2.032;VQSLOD=2.7055;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,30:42:10.30:598,0,10	0/0:12,0:12:33.08:0,33,352	0/0:17,0:17:29.99:0,30,284	0/1:11,0:10:8.19:8,0,116	0/0:32,3:35:15.76:0,16,594	0/0:25,0:25:50.54:0,51,671	0/0:21,0:22:56.95:0,57,575	0/0:25,2:27:7.94:0,8,474	0/0:18,0:18:51.13:0,51,543	0/0:23,1:24:32.26:0,32,516	0/0:20,0:20:42.57:0,43,443	0/0:23,0:23:63.14:0,63,657	0/0:21,0:21:48.10:0,48,498	0/0:22,2:25:13.53:0,14,521	0/0:26,0:26:69.62:0,70,718	0/1:14,3:17:13.21:13,0,273	0/0:28,1:29:53.55:0,54,774	1/1:4,11:15:29.95:246,30,0	0/0:20,1:23:38.17:0,38,530	0/0:25,1:26:41.50:0,42,633	0/0:26,0:26:57.10:0,57,593	0/0:19,0:19:54.11:0,54,559	0/0:20,0:20:44.11:0,44,429	0/0:30,0:32:72.01:0,72,743	0/0:34,0:34:96.20:0,96,997	0/0:24,0:24:57.12:0,57,589	0/0:27,0:26:63.16:0,63,671	0/0:12,0:12:27.07:0,27,285
chr10	97391317	.	C	CCATTCATT	1527.82	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=3.249;DP=631;FS=7.491;HRun=0;HaplotypeScore=155.4734;InbreedingCoeff=0.7748;MQ=69.34;MQ0=1;MQRankSum=-6.467;QD=26.34;ReadPosRankSum=-1.810;VQSLOD=2.5714;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,17:28:30.06:929,30,0	0/0:7,0:7:18.05:0,18,400	0/1:15,0:14:5.64:6,0,131	0/0:11,0:9:5.68:0,6,106	0/0:37,0:37:78.24:0,78,1755	0/0:20,0:20:48.12:0,48,1009	0/0:19,0:19:48.13:0,48,1005	0/0:33,0:33:68.88:0,69,1400	0/0:19,0:19:39.13:0,39,980	0/0:27,0:27:69.21:0,69,1608	0/0:20,0:20:42.14:0,42,1007	0/0:24,0:24:60.18:0,60,1401	0/0:28,0:29:53.54:0,54,1845	0/0:20,0:20:45.14:0,45,1069	0/0:25,0:25:57.20:0,57,1390	0/0:27,0:26:60.15:0,60,1325	0/0:21,0:21:45.08:0,45,860	1/1:5,0:15:21.07:717,21,0	0/0:27,0:27:42.10:0,42,850	0/0:25,0:25:54.18:0,54,1266	0/0:19,0:19:39.12:0,39,938	0/0:25,0:25:37.30:0,37,760	0/0:21,0:21:47.76:0,48,1114	0/0:21,0:21:48.13:0,48,1129	0/0:33,0:33:66.20:0,66,1646	0/0:26,0:26:51.16:0,51,1234	0/0:24,0:24:42.11:0,42,953	0/0:13,0:13:24.01:0,24,455
chr10	97394000	.	T	TG	1637.40	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-6.166;DP=632;FS=0.496;HRun=9;HaplotypeScore=83.7803;InbreedingCoeff=0.9556;MQ=81.97;MQ0=0;MQRankSum=-0.887;QD=17.06;ReadPosRankSum=-2.345;VQSLOD=3.2191;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:47:69.25:0,69,203	0/0:15,0:15:32.98:0,33,286	0/0:20,0:21:34.94:0,35,282	0/0:16,0:17:22.50:0,23,224	0/0:21,0:21:44.98:0,45,390	0/0:15,0:15:35.99:0,36,313	0/0:33,0:33:77.92:0,78,668	0/0:32,0:32:71.90:0,72,615	0/0:15,0:15:38.97:0,39,338	0/0:29,0:29:57.02:0,57,514	0/0:14,0:14:32.93:0,33,278	0/0:26,0:26:50.96:0,51,441	0/0:20,0:20:56.98:0,57,495	0/0:23,0:23:62.94:0,63,536	0/0:16,0:16:38.99:0,39,338	0/0:20,0:20:50:0,50,418	0/0:44,0:44:99:0,111,959	0/0:3,0:33:61.11:0,61,179	1/1:6,13:20:18.45:376,18,0	1/1:11,13:24:33.05:350,33,0	1/1:5,21:26:48.13:531,48,0	0/0:10,0:10:3.59:0,4,109	0/0:23,0:23:35.61:0,36,449	0/0:34,1:35:56.77:0,57,715	0/0:17,0:18:46.99:0,47,388	1/1:3,7:10:15.01:154,15,0	1/1:1,15:16:36.10:398,36,0	0/0:9,0:8:17.98:0,18,156
chr10	97397950	.	AT	A	6637.41	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.573;DP=712;FS=0.000;HRun=3;HaplotypeScore=67.4236;InbreedingCoeff=0.9996;MQ=86.49;MQ0=0;MQRankSum=-1.374;QD=33.19;ReadPosRankSum=0.778;VQSLOD=5.0716;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,47:50:99:1673,135,0	0/0:9,0:9:27.09:0,27,388	0/0:26,0:26:72.01:0,72,920	0/0:21,0:21:57.10:0,57,761	0/0:24,0:24:72.23:0,72,1017	0/0:24,0:24:72.23:0,72,1020	0/0:25,0:25:72.24:0,72,1036	0/0:32,0:32:93.30:0,93,1308	0/0:18,0:18:54.17:0,54,759	0/0:31,0:31:87.29:0,87,1236	0/0:22,0:22:63.17:0,63,884	0/0:23,0:23:63.21:0,63,907	0/0:21,0:21:60.20:0,60,862	0/0:33,0:33:93.31:0,93,1337	0/0:39,0:39:99:0,117,1684	0/0:19,0:19:57.18:0,57,804	0/0:22,0:22:66.21:0,66,932	1/1:0,20:20:51.16:631,51,0	1/1:1,17:18:51.12:604,51,0	1/1:0,27:27:78.18:947,78,0	1/1:0,20:20:57.18:706,57,0	0/0:30,0:30:87.28:0,87,1234	0/0:18,0:18:51.17:0,51,734	0/0:38,0:38:99:0,111,1483	0/0:26,0:26:78.25:0,78,1103	1/1:4,32:36:49.89:1072,50,0	1/1:0,29:29:81.24:1004,81,0	0/0:11,0:11:27.01:0,27,389
chr10	97398208	.	G	GT	7592.26	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-14.971;DP=741;FS=3.180;HRun=1;HaplotypeScore=68.5829;InbreedingCoeff=0.9983;MQ=93.46;MQ0=0;MQRankSum=-2.653;QD=39.96;ReadPosRankSum=2.044;VQSLOD=5.6530;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,50:52:99:2022,135,0	0/0:8,0:8:18.04:0,18,219	0/0:29,0:29:72.16:0,72,896	0/0:35,0:35:95.75:0,96,1129	0/0:27,0:27:81.26:0,81,1052	0/0:23,0:23:66.21:0,66,856	0/0:31,0:31:93.30:0,93,1205	0/0:33,0:33:93.27:0,93,1203	0/0:21,0:21:63.20:0,63,815	0/0:23,0:23:66.20:0,66,842	0/0:15,0:15:45.12:0,45,555	0/0:29,0:29:87.27:0,87,1115	0/0:37,0:37:99:0,108,1384	0/0:18,0:18:51.13:0,51,643	0/0:25,0:25:75.24:0,75,974	0/0:22,0:22:66.17:0,66,838	0/0:31,0:31:93.29:0,93,1191	0/0:32,0:32:87.28:0,87,1128	1/1:1,15:16:45.11:646,45,0	1/1:1,23:24:66.22:981,66,0	1/1:0,49:49:99:2108,141,0	0/0:25,0:25:69.22:0,69,894	0/0:19,0:19:54.14:0,54,699	0/0:33,0:33:93.28:0,93,1191	0/0:23,0:23:69.20:0,69,877	1/1:0,21:21:57.12:804,57,0	1/1:0,26:26:69.23:1032,69,0	0/0:12,0:12:33.11:0,33,428
chr10	97399098	.	G	GGT	995.97	PASS	AB=0.929;AC=8;AF=0.143;AN=56;BaseQRankSum=8.206;DP=825;FS=12.635;HRun=0;HaplotypeScore=125.6330;InbreedingCoeff=0.3444;MQ=62.81;MQ0=18;MQRankSum=-3.150;QD=5.76;ReadPosRankSum=-3.036;VQSLOD=1.8615;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:8.03:0,8,33	0/0:14,0:14:27.07:0,27,322	0/0:45,0:21:37.96:0,38,366	0/0:53,0:30:27.72:0,28,555	0/0:13,0:14:35.94:0,36,420	0/0:20,0:20:54.17:0,54,660	0/0:29,0:29:72.16:0,72,832	0/0:33,0:33:51.09:0,51,819	0/0:25,0:26:59.99:0,60,684	0/0:31,0:31:57.33:0,57,863	0/0:21,0:22:60.01:0,60,706	0/0:35,0:35:69.20:0,69,840	0/0:38,0:39:86.69:0,87,1020	0/0:36,0:36:77.02:0,77,897	0/0:38,0:38:84.25:0,84,1022	0/0:43,0:43:99:0,99,1209	0/0:34,0:34:68.54:0,69,782	1/1:21,0:21:27.33:218,27,0	0/1:24,1:23:8.99:100,0,9	1/1:14,6:20:2.05:83,2,0	0/1:56,4:60:37.55:395,0,38	0/0:18,0:18:39.12:0,39,483	0/0:20,0:20:48.13:0,48,578	0/0:29,0:29:57.96:0,58,771	0/0:24,0:24:70.73:0,71,827	0/1:21,1:22:70.57:108,0,71	0/1:21,3:25:16.63:231,0,17	0/0:14,0:12:9.79:0,10,205
chr10	97399111	.	GTC	G	1526.43	PASS	AB=0.979;AC=11;AF=0.196;AN=56;BaseQRankSum=4.911;DP=862;FS=8.708;HRun=0;HaplotypeScore=113.2224;InbreedingCoeff=0.1624;MQ=58.20;MQ0=22;MQRankSum=-0.754;QD=6.01;ReadPosRankSum=-2.018;VQSLOD=2.2867;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:34:12.01:161,12,0	0/0:15,0:15:26.87:0,27,482	0/0:49,0:16:18.12:0,18,246	0/0:65,0:27:2.99:0,3,533	0/1:18,0:18:3.84:4,0,279	0/0:22,0:22:42.26:0,42,685	0/0:33,0:33:53.97:0,54,914	0/0:35,0:35:31.85:0,32,972	0/0:27,0:27:34.78:0,35,698	0/0:33,0:33:7.34:0,7,834	0/0:23,0:22:46.85:0,47,859	0/0:30,0:30:54.98:0,55,1068	0/0:34,0:34:43.33:0,43,1035	0/0:36,0:36:38.03:0,38,1122	0/0:39,0:39:45.80:0,46,1102	0/0:43,0:43:58.99:0,59,1283	0/1:30,1:31:32.46:32,0,920	0/1:22,0:22:48.74:179,0,49	0/1:19,0:18:8.51:211,0,9	1/1:19,0:19:5.03:160,5,0	0/1:62,0:62:99:413,0,197	0/0:25,0:25:38.51:0,39,854	0/0:24,1:25:21.84:0,22,582	0/0:34,0:34:53.82:0,54,1159	0/0:28,0:28:84.06:0,84,1137	0/1:21,0:21:99:221,0,116	0/1:25,2:27:53.60:294,0,54	0/0:12,0:10:11.60:0,12,280
chr10	97399113	.	CTG	C	443.30	PASS	AB=0.898;AC=15;AF=0.268;AN=56;BaseQRankSum=3.889;DP=863;FS=2.631;HRun=0;HaplotypeScore=117.8684;InbreedingCoeff=-0.2006;MQ=57.85;MQ0=23;MQRankSum=3.893;QD=1.06;ReadPosRankSum=2.335;VQSLOD=2.0398;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:8.93:64,9,0	0/0:13,2:15:1.43:0,1,445	0/0:50,0:16:8.55:0,9,59	0/0:65,0:26:18.51:0,19,221	0/1:15,4:19:74.48:74,0,203	0/1:19,1:22:20.79:21,0,423	0/0:30,0:30:7.71:0,8,610	0/0:34,1:36:9.66:0,10,644	0/1:21,5:26:27.54:28,0,458	0/1:29,3:33:80.29:80,0,547	0/0:24,0:23:42.13:0,42,616	0/1:25,6:31:6.09:6,0,817	0/1:31,2:33:12.45:12,0,660	0/1:28,7:36:54.35:54,0,953	0/1:34,3:37:62.34:62,0,740	0/1:41,4:45:51.91:52,0,970	0/1:29,3:32:72.65:73,0,749	0/0:22,0:22:27.93:0,28,274	0/0:19,0:17:15.50:0,16,183	0/1:19,0:19:8.05:8,0,83	0/0:62,0:62:87.78:0,88,1007	0/0:25,0:25:30.65:0,31,843	0/1:20,5:25:60.28:60,0,441	0/0:33,0:34:30.58:0,31,936	0/0:26,0:27:54.17:0,54,799	0/0:22,0:22:27.19:0,27,306	0/1:27,0:27:1.36:1,0,340	0/0:13,0:11:20.79:0,21,265
chr10	97399299	.	GT	G	1271.67	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.876;DP=727;FS=0.613;HRun=4;HaplotypeScore=76.8691;InbreedingCoeff=0.9978;MQ=78.31;MQ0=0;MQRankSum=-5.179;QD=31.02;ReadPosRankSum=1.395;VQSLOD=4.0646;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:41:99:1367,114,0	0/0:14,0:14:42.14:0,42,587	0/0:35,0:35:99:0,99,1350	0/0:19,0:19:54.14:0,54,717	0/0:24,0:24:66.17:0,66,856	0/0:24,0:24:69.20:0,69,932	0/0:33,0:33:93.29:0,93,1283	0/0:24,0:24:69.22:0,69,951	0/0:21,0:21:63.18:0,63,848	0/0:25,0:25:72.24:0,72,1008	0/0:24,0:24:69.21:0,69,921	0/0:29,0:29:84.25:0,84,1153	0/0:41,0:41:99:0,120,1674	0/0:24,0:24:72.23:0,72,984	0/0:34,0:34:99:0,99,1307	0/0:37,0:37:99:0,105,1470	0/0:30,0:30:90.30:0,90,1259	0/0:13,0:13:39.09:0,39,524	0/0:17,0:17:45.15:0,45,623	0/0:14,0:14:39.12:0,39,530	0/0:42,0:42:99:0,126,1730	0/0:26,0:26:74.84:0,75,1014	0/0:18,0:18:51.10:0,51,690	0/0:31,0:31:93.31:0,93,1302	0/0:23,0:23:69.22:0,69,952	0/0:30,0:30:90.26:0,90,1211	0/0:26,0:26:75.15:0,75,989	0/0:8,0:8:24.08:0,24,336
chr10	97401852	.	GGT	G	244.79	PASS	AB=0.968;AC=23;AF=0.479;AN=48;BaseQRankSum=3.782;DP=586;FS=21.469;HRun=0;HaplotypeScore=74.5393;InbreedingCoeff=-0.1082;MQ=71.00;MQ0=17;MQRankSum=-2.548;QD=0.67;ReadPosRankSum=-0.874;VQSLOD=-0.0863;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:27:2.84:14,3,0	0/0:7,0:7:5.99:0,6,50	./.	./.	0/0:18,0:17:6:0,6,67	0/1:26,0:25:33.69:34,0,118	0/1:23,0:23:6.52:7,0,136	0/0:16,0:15:0:0,0,0	0/0:19,0:18:5.99:0,6,49	0/1:16,0:16:13.58:14,0,142	0/0:7,0:7:3:0,3,25	0/1:25,0:25:32.56:33,0,56	1/1:20,0:20:2.99:25,3,0	0/1:13,0:13:18.92:19,0,19	0/1:24,1:24:11.01:11,0,154	0/1:11,1:12:34.88:47,0,35	0/1:28,6:33:33.95:34,0,199	0/0:15,0:20:5.92:0,6,43	1/1:17,0:16:2.80:13,3,0	./.	./.	1/1:24,0:24:2.37:8,2,0	0/1:19,0:18:25.81:26,0,64	0/1:29,1:32:19.34:19,0,184	0/0:16,0:16:11.95:0,12,110	0/1:23,0:21:0:0,0,0	1/1:16,0:21:11.36:56,11,0	1/1:8,0:8:2.99:23,3,0
chr10	97402880	.	ACATGAGCAGTCAT	A	11751.80	PASS	AB=0.514;AC=13;AF=0.232;AN=56;BaseQRankSum=14.999;DP=589;FS=2.346;HRun=0;HaplotypeScore=219.6880;InbreedingCoeff=0.8973;MQ=88.16;MQ0=0;MQRankSum=-13.898;QD=104.93;ReadPosRankSum=2.000;VQSLOD=4.7357;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:51.18:2011,51,0	0/0:11,0:11:33.10:0,33,1952	0/0:19,0:19:45.27:0,45,2436	0/0:27,0:27:78.70:0,79,3571	0/0:22,0:22:66.21:0,66,4167	0/0:25,0:25:75.26:0,75,4809	0/0:24,0:24:72.25:0,72,4440	0/0:30,0:30:90.29:0,90,5165	0/0:20,0:20:60.21:0,60,3709	0/0:37,0:37:99:0,108,6755	0/0:19,0:19:57.20:0,57,3517	0/0:21,0:21:63.22:0,63,4092	0/0:17,0:17:51.18:0,51,3359	0/0:27,0:27:81.26:0,81,4994	0/0:27,0:27:81.28:0,81,5310	0/0:19,0:19:57.20:0,57,3733	0/0:37,0:37:99:0,111,6601	1/1:0,10:10:21.07:880,21,0	1/1:0,16:16:45.11:1509,45,0	1/1:0,20:20:57.20:2388,57,0	1/1:0,9:9:18.06:723,18,0	0/0:19,0:19:57.20:0,57,3487	0/0:18,0:18:54.19:0,54,3331	0/0:29,0:29:87.28:0,87,5332	0/0:18,0:18:54.17:0,54,3192	0/1:1,18:19:99:2129,0,147	1/1:0,17:17:51.18:2111,51,0	0/0:11,0:11:33.11:0,33,2242
chr10	97405015	.	CCT	C	1999.28	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.612;DP=764;FS=0.572;HRun=0;HaplotypeScore=101.1352;InbreedingCoeff=0.9985;MQ=86.03;MQ0=0;MQRankSum=-4.837;QD=39.99;ReadPosRankSum=2.572;VQSLOD=5.3553;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,50:50:99:2094,132,0	0/0:9,0:9:27.05:0,27,507	0/0:23,0:23:69.24:0,69,1369	0/0:29,0:29:84.03:0,84,1435	0/0:33,0:33:99:0,99,1961	0/0:31,0:31:93.32:0,93,1888	0/0:30,0:30:90.30:0,90,1792	0/0:25,0:25:72.23:0,72,1382	0/0:29,0:29:87.27:0,87,1693	0/0:26,0:26:78.26:0,78,1528	0/0:22,0:22:66.23:0,66,1291	0/0:28,0:28:84.25:0,84,1598	0/0:35,0:35:99:0,105,2046	0/0:28,0:28:84.24:0,84,1587	0/0:33,0:33:99:0,99,1905	0/0:26,0:26:78.27:0,78,1584	0/0:28,0:28:84.29:0,84,1694	0/0:34,0:34:99:0,99,1896	0/0:22,0:22:66.22:0,66,1293	0/0:23,0:23:69.21:0,69,1329	0/0:30,0:30:90.29:0,90,1785	0/0:29,0:29:87.30:0,87,1755	0/0:16,0:16:48.15:0,48,938	0/0:36,0:36:99:0,108,2155	0/0:27,0:26:81.14:0,81,1535	0/0:27,0:27:81.27:0,81,1604	0/0:25,0:25:75.23:0,75,1450	0/0:10,0:10:30.10:0,30,609
chr10	97405638	.	CA	C	3218.01	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=6.720;DP=291;FS=19.402;HRun=2;HaplotypeScore=33.5601;InbreedingCoeff=0.8875;MQ=95.42;MQ0=0;MQRankSum=-1.731;QD=37.42;ReadPosRankSum=4.156;VQSLOD=1.5180;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:63.18:859,63,0	0/0:5,0:5:15.05:0,15,240	0/0:15,0:15:38.83:0,39,623	0/0:20,0:16:0.61:0,1,344	0/0:12,0:12:36.12:0,36,570	0/0:1,0:1:3.01:0,3,48	0/0:17,0:17:48.15:0,48,743	0/0:18,0:17:54.18:0,54,862	0/0:5,0:5:15.05:0,15,237	0/0:12,0:12:36.12:0,36,576	0/0:11,0:11:30.07:0,30,456	0/0:10,0:10:30.10:0,30,479	0/0:4,0:4:9.03:0,9,144	0/0:9,0:9:27.09:0,27,431	0/0:10,0:10:27.09:0,27,431	0/0:10,0:10:30.05:0,30,451	0/0:5,0:5:15.05:0,15,233	1/1:2,10:12:30.08:401,30,0	1/1:0,8:8:24.07:314,24,0	1/1:0,13:13:39.13:545,39,0	1/1:0,16:16:48.16:664,48,0	0/0:7,0:7:21.07:0,21,313	0/0:8,0:8:24.08:0,24,368	0/0:15,0:15:45.11:0,45,687	0/0:2,0:2:6.02:0,6,96	1/1:0,6:6:18.06:251,18,0	1/1:0,10:10:27.09:377,27,0	0/0:8,0:8:24.08:0,24,384
chr10	97406828	.	T	TGGCAAAGAG	17275.65	PASS	AB=0.531;AC=13;AF=0.232;AN=56;BaseQRankSum=2.848;DP=748;FS=0.000;HRun=0;HaplotypeScore=198.9222;InbreedingCoeff=0.8957;MQ=89.91;MQ0=0;MQRankSum=-17.113;QD=90.45;ReadPosRankSum=-0.179;VQSLOD=4.8827;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,24:44:90.31:3955,90,0	0/0:7,0:7:21.07:0,21,634	0/0:29,0:29:84.11:0,84,2191	0/0:35,0:35:99:0,102,2502	0/0:24,0:24:66.23:0,66,2011	0/0:28,0:28:84.29:0,84,2696	0/0:41,0:41:99:0,123,3532	0/0:24,0:24:63.13:0,63,1779	0/0:35,0:35:99:0,102,3160	0/0:22,0:22:63.18:0,63,1853	0/0:17,0:17:51.18:0,51,1596	0/0:38,0:38:99:0,111,3346	0/0:33,0:33:99:0,99,3083	0/0:33,0:33:96.29:0,96,2961	0/0:27,0:27:78.23:0,78,2212	0/0:28,0:28:84.25:0,84,2620	0/0:36,0:36:99:0,105,3115	1/1:8,12:27:48.16:2230,48,0	1/1:8,11:29:78.23:3190,78,0	1/1:2,8:15:36.08:1343,36,0	1/1:5,12:23:28.52:573,29,0	0/0:24,0:24:72.23:0,72,2229	0/0:5,0:5:15.05:0,15,417	0/0:37,0:37:99:0,111,3020	0/0:26,0:26:78.23:0,78,2283	0/1:3,17:26:44.21:3158,0,44	1/1:3,17:26:60.21:2826,60,0	0/0:8,0:8:24.08:0,24,776
chr10	97407145	.	T	TG	8171.44	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.396;DP=628;FS=1.862;HRun=0;HaplotypeScore=67.4859;InbreedingCoeff=0.9992;MQ=76.93;MQ0=0;MQRankSum=-3.034;QD=44.90;ReadPosRankSum=2.394;VQSLOD=5.2473;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:42:99:1964,123,0	0/0:11,0:11:30.10:0,30,420	0/0:14,0:14:42.14:0,42,574	0/0:15,0:15:39.10:0,39,516	0/0:24,0:24:72.24:0,72,1007	0/0:16,0:16:48.16:0,48,671	0/0:27,0:27:78.26:0,78,1090	0/0:20,0:20:60.20:0,60,839	0/0:15,0:15:45.15:0,45,629	0/0:28,0:28:84.27:0,84,1147	0/0:14,0:14:42.14:0,42,588	0/0:21,0:21:63.21:0,63,880	0/0:21,0:21:63.20:0,63,865	0/0:33,0:33:99:0,99,1366	0/0:20,0:20:60.20:0,60,839	0/0:11,0:11:30.10:0,30,420	0/0:36,0:36:99:0,108,1511	1/1:0,23:23:66.23:1055,66,0	1/1:1,15:16:48.16:764,48,0	1/1:0,11:11:27.09:431,27,0	1/1:0,41:41:99:1823,114,0	0/0:34,0:34:99:0,102,1412	0/0:15,0:15:45.15:0,45,628	0/0:33,0:33:96.30:0,96,1322	0/0:30,0:30:90.30:0,90,1259	1/1:1,24:25:72.23:1128,72,0	1/1:0,24:24:63.21:1006,63,0	0/0:8,0:8:24.08:0,24,336
chr10	97407430	.	AC	A	4951.55	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=16.454;DP=752;FS=7.537;HRun=1;HaplotypeScore=87.7382;InbreedingCoeff=0.9996;MQ=82.16;MQ0=0;MQRankSum=-2.914;QD=35.88;ReadPosRankSum=0.418;VQSLOD=4.5815;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,148,2346	0/0:11,0:11:33.11:0,33,527	0/0:21,0:21:63.19:0,63,934	0/0:28,0:28:75.21:0,75,1105	0/0:31,0:31:90.20:0,90,1376	0/0:24,0:24:72.25:0,72,1144	0/0:23,0:23:69.23:0,69,1084	0/0:21,0:21:63.20:0,63,979	0/0:29,0:29:87.30:0,87,1388	0/0:36,0:36:99:0,108,1723	0/0:14,0:14:42.13:0,42,643	0/0:39,0:39:99:0,117,1842	0/0:33,0:33:99:0,99,1529	0/0:27,0:27:81.24:0,81,1265	0/0:25,0:25:75.22:0,75,1148	0/0:25,0:25:75.24:0,75,1151	0/0:32,0:32:96.33:0,96,1519	0/0:35,0:35:95.66:0,96,751	1/1:0,19:19:54.13:682,54,0	1/1:0,15:15:42.14:545,42,0	1/1:2,44:46:99:1736,135,0	0/0:31,0:31:93.31:0,93,1460	0/0:22,0:22:66.21:0,66,1010	0/0:27,0:27:81.28:0,81,1294	0/0:21,0:21:60.20:0,60,958	1/1:2,25:27:30.20:898,30,0	1/1:0,31:31:84.27:1090,84,0	0/0:9,0:9:27.09:0,27,431
chr10	97407801	.	T	TAAAAAA	646.79	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.437;DP=569;FS=0.890;HRun=9;HaplotypeScore=116.5300;InbreedingCoeff=0.8954;MQ=70.50;MQ0=0;MQRankSum=-3.553;QD=17.97;ReadPosRankSum=-1.007;VQSLOD=-0.0520;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,14:24:12.04:375,12,0	0/0:9,0:9:27.09:0,27,491	0/0:21,0:21:33.27:0,33,722	0/0:10,0:9:2.95:0,3,210	0/0:26,0:26:75.23:0,75,1380	0/0:21,0:21:57.18:0,57,1039	0/0:19,0:20:50.76:0,51,837	0/0:33,0:33:90.20:0,90,1612	0/0:23,0:23:63.17:0,63,1121	0/0:23,0:23:69.23:0,69,1235	0/0:25,0:25:60.09:0,60,1106	0/0:16,0:16:42.08:0,42,771	0/0:21,0:21:51.05:0,51,946	0/0:15,0:15:39.07:0,39,723	0/0:16,0:16:42.07:0,42,740	0/0:13,0:14:42.13:0,42,728	0/0:27,0:29:75.12:0,75,1315	1/1:2,0:12:30.07:388,30,0	0/0:30,0:30:55.42:0,55,1134	0/0:29,0:29:50.65:0,51,1302	0/0:6,0:6:18.03:0,18,255	0/0:23,0:23:63.18:0,63,1114	0/0:19,0:19:45.06:0,45,781	0/0:12,0:12:33.09:0,33,612	0/0:24,0:24:62.81:0,63,1115	0/0:25,0:26:63.04:0,63,1148	0/0:26,0:26:75.21:0,75,1372	0/0:16,0:16:45.14:0,45,825
chr10	97408191	.	ATGG	A	2670.95	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.559;DP=679;FS=0.000;HRun=0;HaplotypeScore=97.4534;InbreedingCoeff=0.9954;MQ=78.49;MQ0=0;MQRankSum=-2.551;QD=38.16;ReadPosRankSum=2.048;VQSLOD=4.3270;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,48:48:99:1828,114,0	0/0:6,0:6:18.06:0,18,397	0/0:19,0:19:50.48:0,50,870	0/0:13,0:13:27.92:0,28,597	0/0:25,0:24:60.19:0,60,1240	0/0:24,0:24:69.24:0,69,1522	0/0:31,0:31:87.30:0,87,1904	0/0:30,0:30:84.27:0,84,1792	0/0:22,0:22:63.22:0,63,1363	0/0:32,0:32:84.29:0,84,1798	0/0:18,0:18:45.15:0,45,927	0/0:19,0:19:54.19:0,54,1192	0/0:20,0:20:60.21:0,60,1322	0/0:19,0:19:51.17:0,51,1126	0/0:26,0:26:75.26:0,75,1635	0/0:27,0:27:81.28:0,81,1774	0/0:27,0:27:81.28:0,81,1788	1/1:1,21:22:60.20:964,60,0	0/0:23,0:23:63.22:0,63,1343	0/0:33,0:33:93.27:0,93,1888	0/0:23,0:23:60.18:0,60,1278	0/0:32,0:32:84.29:0,84,1825	0/0:27,0:27:75.24:0,75,1608	0/0:22,0:22:63.22:0,63,1391	0/0:25,0:25:69.24:0,69,1524	0/0:26,0:26:66.23:0,66,1456	0/0:27,0:27:72.25:0,72,1578	0/0:13,0:13:36.12:0,36,779
chr10	97409291	.	CTAAGGTCATCAGATCTTTT	C	3385.24	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.827;DP=714;FS=0.000;HRun=0;HaplotypeScore=350.8290;InbreedingCoeff=0.9915;MQ=89.09;MQ0=0;MQRankSum=-7.164;QD=109.20;ReadPosRankSum=2.568;VQSLOD=2.5709;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,26:31:63.22:3385,63,0	0/0:6,0:6:18.06:0,18,1487	0/0:36,0:36:99:0,108,7003	0/0:17,0:17:41.07:0,41,2640	0/0:24,0:24:72.25:0,72,6242	0/0:24,0:24:69.24:0,69,6255	0/0:32,0:32:96.32:0,96,7281	0/0:41,0:41:99:0,123,10144	0/0:25,0:25:72.25:0,72,6160	0/0:26,0:26:72.25:0,72,5755	0/0:17,0:17:48.16:0,48,3982	0/0:32,0:32:96.30:0,96,7701	0/0:27,0:27:81.28:0,81,6943	0/0:25,0:25:72.23:0,72,5529	0/0:40,0:40:99:0,114,9441	0/0:29,0:29:87.30:0,87,7408	0/0:31,0:31:93.32:0,93,7746	0/0:30,0:30:90.31:0,90,7795	0/0:19,0:19:57.20:0,57,4241	0/0:14,0:14:39.13:0,39,2752	0/0:31,0:31:93.30:0,93,7791	0/0:17,0:17:48.16:0,48,4129	0/0:17,0:17:51.16:0,51,4256	0/0:45,0:45:99:0,126,10607	0/0:21,0:21:63.19:0,63,5025	0/0:30,0:30:90.31:0,90,7580	0/0:17,0:17:51.18:0,51,4385	0/0:10,0:10:30.10:0,30,2583
chr10	97410490	.	T	TG	1128.44	PASS	AB=0.661;AC=7;AF=0.125;AN=56;BaseQRankSum=7.757;DP=730;FS=5.751;HRun=1;HaplotypeScore=85.9361;InbreedingCoeff=0.6184;MQ=79.61;MQ0=3;MQRankSum=-0.873;QD=14.28;ReadPosRankSum=-1.322;VQSLOD=2.4861;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,105,1303	0/0:12,0:12:36.12:0,36,463	0/0:36,0:31:61.46:0,61,895	0/0:33,0:28:60.16:0,60,847	0/0:22,0:22:66.20:0,66,838	0/0:36,0:36:99:0,108,1383	0/0:35,0:35:99:0,102,1305	0/0:26,0:26:72.20:0,72,886	0/0:36,0:36:99:0,105,1330	0/0:32,0:32:96.29:0,96,1213	0/0:14,0:14:42.14:0,42,544	0/0:27,0:27:81.22:0,81,1019	0/0:23,0:23:63.18:0,63,796	0/0:26,0:26:78.25:0,78,1011	0/0:27,0:27:81.23:0,81,1020	0/0:28,0:28:84.27:0,84,1090	0/0:49,0:49:99:0,144,1865	0/0:30,0:30:78.05:0,78,770	1/1:3,12:14:33.91:347,34,0	0/1:6,4:10:10.84:151,0,11	0/1:5,12:16:0.99:249,0,1	0/0:14,0:14:42.12:0,42,531	0/0:27,0:27:81.22:0,81,1028	0/0:34,0:34:99:0,102,1283	0/0:34,0:34:89.87:0,90,1123	0/1:8,7:14:31.81:169,0,32	1/1:4,18:21:30.09:355,30,0	0/0:10,0:10:24.01:0,24,277
chr10	97410498	.	G	GT	1078.84	PASS	AB=0.982;AC=7;AF=0.125;AN=56;BaseQRankSum=3.295;DP=717;FS=3.809;HRun=0;HaplotypeScore=83.4991;InbreedingCoeff=0.1882;MQ=81.48;MQ0=2;MQRankSum=-2.392;QD=9.99;ReadPosRankSum=1.687;VQSLOD=3.9067;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,1503	0/0:11,0:11:33.09:0,33,429	0/0:31,0:30:84.10:0,84,1043	0/0:34,0:30:59.90:0,60,826	0/0:23,0:23:66.20:0,66,882	0/0:38,0:38:99:0,108,1452	0/0:35,0:35:99:0,102,1346	0/0:24,0:24:72.21:0,72,942	0/0:30,0:30:90.29:0,90,1235	0/0:27,0:27:81.22:0,81,1077	0/0:14,0:14:42.14:0,42,579	0/0:24,0:24:72.24:0,72,986	0/0:24,0:24:72.20:0,72,935	0/0:30,0:30:90.27:0,90,1208	0/0:29,0:29:87.25:0,87,1131	0/0:28,0:28:84.27:0,84,1150	0/0:49,0:49:99:0,147,2025	1/1:0,27:27:66.22:986,66,0	0/1:17,0:16:58.68:59,0,64	0/1:9,1:10:55.29:55,0,97	0/1:20,0:19:35.98:36,0,139	0/0:15,0:15:45.13:0,45,592	0/0:26,0:26:78.23:0,78,1042	0/0:33,0:33:99:0,99,1326	0/0:31,0:31:81.23:0,81,1074	0/1:14,0:13:10.74:11,0,154	0/1:20,0:19:37.17:68,0,37	0/0:7,0:7:21.05:0,21,275
chr10	97410879	.	T	TGTAG	4048.69	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.207;DP=684;FS=0.531;HRun=0;HaplotypeScore=122.2315;InbreedingCoeff=0.9992;MQ=76.68;MQ0=0;MQRankSum=-5.573;QD=54.71;ReadPosRankSum=-0.178;VQSLOD=4.7621;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,30:39:81.28:2105,81,0	0/0:12,0:12:36.12:0,36,663	0/0:13,0:13:36.12:0,36,654	0/0:16,0:16:39.13:0,39,690	0/0:27,0:27:72.18:0,72,1306	0/0:17,0:17:45.14:0,45,809	0/0:35,0:34:99:0,99,1839	0/0:32,0:32:93.32:0,93,1723	0/0:22,0:22:63.20:0,63,1144	0/0:18,0:18:48.16:0,48,866	0/0:22,0:22:63.22:0,63,1167	0/0:25,0:25:75.26:0,75,1400	0/0:20,0:20:54.15:0,54,972	0/0:31,0:31:75.26:0,75,1376	0/0:32,0:32:87.30:0,87,1607	0/0:26,0:26:62.76:0,63,1201	0/0:41,0:41:99:0,114,2093	1/1:6,25:32:75.26:1943,75,0	0/0:26,0:26:72.22:0,72,1272	0/0:17,0:17:45.15:0,45,820	0/0:32,0:32:87.30:0,87,1615	0/0:17,0:17:48.16:0,48,896	0/0:13,0:13:33.11:0,33,616	0/0:23,0:23:66.23:0,66,1214	0/0:22,0:22:60.21:0,60,1109	0/0:36,0:36:93.31:0,93,1667	0/0:26,0:26:75.26:0,75,1378	0/0:9,0:9:27.09:0,27,504
chr10	97410917	.	AC	A	866.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.066;DP=697;FS=1.548;HRun=3;HaplotypeScore=89.1310;InbreedingCoeff=0.9978;MQ=83.52;MQ0=0;MQRankSum=-8.252;QD=22.80;ReadPosRankSum=0.415;VQSLOD=2.9024;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,29:35:84.09:961,84,0	0/0:9,0:9:24.08:0,24,345	0/0:24,0:24:67.93:0,68,911	0/0:19,0:19:54.18:0,54,760	0/0:28,0:28:83.87:0,84,1174	0/0:17,0:17:51.16:0,51,716	0/0:35,0:34:99:0,105,1495	0/0:26,0:26:75.23:0,75,1030	0/0:21,0:21:63.21:0,63,901	0/0:25,0:25:75.25:0,75,1080	0/0:18,0:18:54.17:0,54,757	0/0:28,0:28:81.26:0,81,1147	0/0:15,0:15:45.14:0,45,630	0/0:32,0:32:90.27:0,90,1256	0/0:35,0:35:99:0,105,1493	0/0:22,0:22:66.21:0,66,931	0/0:43,0:43:99:0,126,1711	0/0:27,0:27:72.20:0,72,1012	0/0:30,0:30:87.28:0,87,1230	0/0:15,0:15:39.13:0,39,560	0/0:39,0:39:99:0,117,1681	0/0:20,0:20:60.20:0,60,862	0/0:12,0:12:36.12:0,36,518	0/0:22,0:22:63.17:0,63,884	0/0:27,0:27:81.26:0,81,1149	0/0:30,0:30:90.28:0,90,1261	0/0:25,0:25:72.19:0,72,992	0/0:15,0:15:45.15:0,45,644
chr10	97410924	.	CA	C	992.01	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.293;DP=697;FS=0.687;HRun=1;HaplotypeScore=87.0933;InbreedingCoeff=0.9989;MQ=81.98;MQ0=0;MQRankSum=-8.033;QD=26.11;ReadPosRankSum=-0.544;VQSLOD=3.3259;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:35:90.24:1087,90,0	0/0:9,0:9:27.05:0,27,396	0/0:21,0:21:58.94:0,59,938	0/0:19,0:19:57.19:0,57,892	0/0:29,0:29:87.28:0,87,1367	0/0:20,0:20:60.20:0,60,959	0/0:37,0:36:99:0,111,1720	0/0:23,0:23:69.21:0,69,1022	0/0:22,0:22:66.22:0,66,1047	0/0:27,0:27:81.28:0,81,1286	0/0:20,0:20:60.20:0,60,951	0/0:26,0:26:78.27:0,78,1247	0/0:17,0:17:51.17:0,51,815	0/0:31,0:31:90.31:0,90,1439	0/0:35,0:35:99:0,105,1610	0/0:22,0:22:63.21:0,63,1007	0/0:40,0:40:99:0,120,1866	0/0:27,0:27:75.24:0,75,1174	0/0:32,0:32:93.30:0,93,1457	0/0:15,0:15:45.14:0,45,688	0/0:38,0:38:99:0,114,1762	0/0:20,0:20:60.18:0,60,914	0/0:14,0:14:42.14:0,42,671	0/0:21,0:21:63.21:0,63,1007	0/0:28,0:28:81.27:0,81,1266	0/0:28,0:28:81.28:0,81,1296	0/0:25,0:25:75.25:0,75,1171	0/0:13,0:13:39.13:0,39,615
chr10	97411542	.	A	AACG	8580.40	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-10.297;DP=572;FS=3.737;HRun=0;HaplotypeScore=79.4331;InbreedingCoeff=0.9968;MQ=89.49;MQ0=0;MQRankSum=-3.301;QD=54.65;ReadPosRankSum=0.917;VQSLOD=6.5915;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:36:84.12:1834,84,0	0/0:7,0:7:21.07:0,21,358	0/0:24,0:24:60.16:0,60,1020	0/0:24,0:24:62.78:0,63,951	0/0:20,0:20:60.19:0,60,965	0/0:20,0:20:60.19:0,60,993	0/0:28,0:28:84.27:0,84,1379	0/0:20,0:20:57.17:0,57,898	0/0:14,0:14:42.11:0,42,639	0/0:26,0:26:69.24:0,69,1172	0/0:19,0:19:57.20:0,57,972	0/0:21,0:21:63.22:0,63,1070	0/0:19,0:19:57.19:0,57,946	0/0:22,0:22:66.23:0,66,1122	0/0:31,0:31:90.29:0,90,1486	0/0:22,0:22:66.20:0,66,1075	0/0:26,0:26:78.24:0,78,1274	1/1:0,18:19:42.14:967,42,0	1/1:1,8:9:27.02:524,27,0	1/1:0,15:16:41.72:820,42,0	1/1:1,26:28:77.55:1587,78,0	0/0:21,0:21:57.20:0,57,971	0/0:17,0:17:48.16:0,48,818	0/0:7,0:7:18.05:0,18,282	0/0:19,0:19:57.20:0,57,971	1/1:2,17:20:50.90:1059,51,0	1/1:1,26:28:81.01:1790,81,0	0/0:8,0:8:21.07:0,21,354
chr10	97411710	.	T	TTG	888.95	PASS	AB=0.984;AC=4;AF=0.071;AN=56;BaseQRankSum=-0.862;DP=980;FS=3.151;HRun=0;HaplotypeScore=151.5495;InbreedingCoeff=0.3100;MQ=59.35;MQ0=6;MQRankSum=-0.021;QD=9.26;ReadPosRankSum=-0.964;VQSLOD=3.5050;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,27:50:6.28:968,6,0	0/0:18,0:18:30.07:0,30,333	0/0:24,0:8:7.29:0,7,30	0/0:21,0:10:4.33:0,4,50	0/0:30,0:30:44.70:0,45,470	0/0:27,1:27:19.49:0,19,643	0/0:30,0:30:51.03:0,51,576	0/0:32,0:31:38.13:0,38,412	0/0:32,1:34:16.49:0,16,602	0/0:46,0:48:39.94:0,40,746	0/0:19,0:22:0.07:0,0,410	0/0:58,0:59:81.82:0,82,1167	0/0:43,0:47:99:0,99,1086	0/0:35,0:35:69.11:0,69,742	0/0:53,1:58:76.16:0,76,1237	0/0:48,1:49:49.72:0,50,982	0/0:30,0:34:74.41:0,74,798	0/0:28,0:28:41.83:0,42,530	0/1:16,0:13:6.77:7,0,110	0/0:31,0:32:53.98:0,54,599	0/0:73,0:74:99:0,114,1262	0/1:29,1:30:7.27:7,0,586	0/0:19,0:22:38.64:0,39,407	0/0:35,0:36:78:0,78,843	0/0:28,0:27:22.14:0,22,454	0/0:47,0:47:73.26:0,73,999	0/0:29,0:31:41.64:0,42,566	0/0:15,0:15:35.77:0,36,374
chr10	97411775	.	AGT	A	6048.67	PASS	AB=0.780;AC=13;AF=0.232;AN=56;BaseQRankSum=14.449;DP=1157;FS=50.742;HRun=0;HaplotypeScore=172.5733;InbreedingCoeff=0.7068;MQ=54.64;MQ0=13;MQRankSum=-0.599;QD=17.74;ReadPosRankSum=3.314;VQSLOD=2.8955;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,33:41:56.73:742,57,0	0/0:14,0:14:42.09:0,42,648	0/1:51,1:11:14.13:14,0,206	0/0:59,1:22:25.45:0,25,610	0/0:27,0:25:72.23:0,72,1187	0/0:23,0:23:60.17:0,60,979	0/0:43,0:43:99:0,118,1924	0/0:57,0:56:99:0,135,2079	0/0:40,0:40:99:0,111,1814	0/0:72,0:72:99:0,214,3507	0/0:21,0:21:45.15:0,45,717	0/0:57,0:57:99:0,153,2529	0/0:62,0:62:99:0,156,2574	0/0:39,0:39:99:0,117,1994	0/0:70,0:68:99:0,190,3082	0/0:45,0:44:99:0,111,1887	0/0:37,0:37:99:0,102,1713	1/1:10,24:33:23.86:950,24,0	0/1:12,4:10:65.10:211,0,65	1/1:4,23:26:35.48:442,35,0	1/1:33,58:91:99:1591,123,0	0/0:28,0:28:75.22:0,75,1206	0/0:26,0:25:57.15:0,57,956	0/0:49,0:49:99:0,120,2030	0/0:20,0:19:39.12:0,39,642	0/1:9,34:43:13.49:1132,0,13	1/1:7,28:34:75.22:967,75,0	0/0:24,0:24:63:0,63,1042
chr10	97411834	.	C	CATAT	1370.55	PASS	AB=0.845;AC=5;AF=0.089;AN=56;BaseQRankSum=10.950;DP=1190;FS=5.319;HRun=0;HaplotypeScore=258.8144;InbreedingCoeff=-0.0905;MQ=57.15;MQ0=4;MQRankSum=-8.307;QD=10.54;ReadPosRankSum=-1.766;VQSLOD=2.2139;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:19.85:0,20,404	0/0:16,0:16:42.13:0,42,781	0/0:43,0:26:47.78:0,48,1042	0/0:57,0:39:91.59:0,92,1519	0/0:42,0:42:99:0,114,2117	0/0:30,0:30:77.92:0,78,1444	0/0:44,0:44:99:0,111,2004	0/0:43,0:43:99:0,123,2133	0/0:51,0:51:99:0,147,2774	0/0:78,0:78:99:0,232,4199	0/0:23,0:23:53.89:0,54,1013	0/0:72,0:72:99:0,205,3841	0/0:70,0:70:99:0,208,3795	0/0:57,0:57:99:0,162,3029	0/0:73,0:72:99:0,204,3799	0/0:56,0:56:99:0,160,3007	0/0:47,0:47:99:0,132,2353	0/1:24,0:24:8.10:8,0,559	0/1:12,4:14:99:228,0,210	0/1:15,4:16:18.98:47,0,19	0/0:52,4:56:16.94:0,17,341	0/0:29,0:29:81.26:0,81,1518	0/0:33,0:33:72.18:0,72,1290	0/0:61,0:61:99:0,168,3110	0/0:26,0:26:56.93:0,57,1052	0/1:33,16:48:99:1017,0,421	0/1:18,4:22:99:185,0,244	0/0:16,0:16:45.09:0,45,746
chr10	97411838	.	T	TGTGTGC	3701.23	PASS	AB=0.860;AC=7;AF=0.125;AN=56;BaseQRankSum=7.651;DP=1228;FS=0.984;HRun=0;HaplotypeScore=320.6851;InbreedingCoeff=-0.1429;MQ=57.31;MQ0=4;MQRankSum=-9.022;QD=14.75;ReadPosRankSum=-1.400;VQSLOD=1.5994;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:39:99:153,0,256	0/0:15,0:15:42.13:0,42,1022	0/0:40,0:25:64.67:0,65,1345	0/0:54,0:37:99:0,99,1955	0/0:45,0:45:99:0,117,2809	0/0:31,0:31:83.76:0,84,1999	0/0:46,0:46:99:0,123,2729	0/0:42,0:42:99:0,120,2760	0/0:52,0:52:99:0,153,3659	0/0:79,0:79:99:0,235,5415	0/0:23,0:23:56.67:0,57,1351	0/0:75,0:75:99:0,210,5081	0/0:76,0:76:99:0,223,5054	0/0:58,0:58:99:0,168,3954	0/0:72,0:71:99:0,211,5011	0/0:56,0:56:99:0,169,4075	0/0:46,0:46:99:0,129,3064	0/1:25,0:28:99:276,0,629	0/1:16,4:18:99:578,0,409	0/1:19,4:20:70.79:71,0,91	0/1:61,4:65:99:132,0,660	0/0:30,0:30:90.24:0,90,2001	0/0:31,0:31:71.78:0,72,1675	0/0:61,0:61:99:0,169,4115	0/0:27,0:27:57.67:0,58,1378	0/1:37,16:53:99:2142,0,895	0/1:19,4:23:99:348,0,439	0/0:18,0:18:45.08:0,45,962
chr10	97412130	.	TGA	T	162.21	PASS	AB=0.911;AC=4;AF=0.071;AN=56;BaseQRankSum=8.387;DP=1197;FS=6.251;HRun=0;HaplotypeScore=185.1753;InbreedingCoeff=0.2862;MQ=56.07;MQ0=22;MQRankSum=-5.250;QD=1.82;ReadPosRankSum=-5.885;VQSLOD=-0.3860;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,3:15:5.21:53,5,0	0/0:15,0:15:44.94:0,45,767	0/0:51,0:12:12.28:0,12,258	0/0:52,0:19:11.44:0,11,429	0/0:38,0:38:99:0,112,1964	0/0:21,0:20:57.06:0,57,830	0/0:48,0:48:99:0,135,2393	0/0:39,0:38:99:0,102,1754	0/0:48,0:48:99:0,126,2438	0/0:82,0:79:99:0,231,4100	0/0:19,0:19:57.16:0,57,1019	0/0:76,0:76:99:0,216,3783	0/0:70,0:69:99:0,208,3714	0/0:69,0:68:99:0,202,3583	0/0:61,0:60:99:0,172,3114	0/0:45,0:45:99:0,132,2416	0/0:33,0:33:93.63:0,94,1508	0/1:23,1:22:34.46:34,0,375	0/1:37,7:26:99:180,0,356	0/0:13,0:11:3:0,3,26	0/0:79,6:73:68.63:0,69,1018	0/0:38,0:38:99:0,111,2017	0/0:21,0:21:60.19:0,60,1122	0/0:53,0:53:99:0,144,2674	0/0:46,0:45:99:0,123,2131	0/0:41,0:36:7.71:0,8,735	0/0:19,0:19:8.93:0,9,74	0/0:25,0:25:72.23:0,72,1353
chr10	97412132	.	A	AGT	2328.79	PASS	AB=0.840;AC=11;AF=0.196;AN=56;BaseQRankSum=8.525;DP=1205;FS=2.589;HRun=0;HaplotypeScore=179.0271;InbreedingCoeff=0.8715;MQ=56.40;MQ0=23;MQRankSum=-5.706;QD=10.04;ReadPosRankSum=-5.949;VQSLOD=2.4401;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:17,4:15:0.41:2,0,0	0/0:16,0:16:42.08:0,42,511	0/0:56,0:14:18.33:0,18,344	0/0:53,0:20:4.66:0,5,353	0/0:40,0:40:99:0,103,1338	0/0:21,0:20:47.89:0,48,628	0/0:50,0:50:99:0,117,1501	0/0:38,0:37:96.03:0,96,1210	0/0:48,0:48:99:0,126,1626	0/0:79,0:76:99:0,217,2779	0/0:19,0:19:57.18:0,57,738	0/0:75,0:75:99:0,202,2593	0/0:72,0:71:99:0,193,2487	0/0:67,0:67:99:0,184,2401	0/0:60,0:59:99:0,162,2079	0/0:46,0:46:99:0,123,1600	0/0:31,0:31:75.14:0,75,916	1/1:20,2:20:35.76:384,36,0	1/1:36,7:25:42.29:468,42,0	0/0:12,1:11:1.25:0,1,3	1/1:70,17:75:63.60:904,64,0	0/0:37,0:37:99:0,99,1255	0/0:21,0:21:57.18:0,57,749	0/0:56,0:56:99:0,141,1849	0/0:47,0:46:99:0,105,1346	1/1:38,2:34:22.02:653,22,0	1/1:19,0:19:6.02:86,6,0	0/0:25,0:25:72.22:0,72,930
chr10	97412138	.	T	TGTGTATGTGTGTGTATG	10045.34	PASS	AB=0.641;AC=12;AF=0.214;AN=56;BaseQRankSum=-0.244;DP=1242;FS=1.230;HRun=0;HaplotypeScore=465.3742;InbreedingCoeff=0.6761;MQ=56.19;MQ0=23;MQRankSum=-5.588;QD=36.93;ReadPosRankSum=-8.600;VQSLOD=1.2547;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:16,2:18:14.87:375,15,0	0/0:16,0:16:45.14:0,45,1739	0/0:66,0:15:35.18:0,35,989	0/0:62,0:24:0.79:0,1,1148	0/0:40,0:40:99:0,114,4673	0/0:19,0:18:51.18:0,51,1944	0/0:45,0:45:99:0,126,4396	0/0:40,0:39:99:0,111,3808	0/0:46,0:46:99:0,135,5555	0/0:78,0:76:99:0,223,9384	0/0:19,0:19:57.19:0,57,2257	0/0:76,0:76:99:0,211,8558	0/0:73,0:72:99:0,211,8374	0/0:65,0:65:99:0,190,8245	0/0:58,0:57:99:0,169,6864	0/0:47,0:47:99:0,138,5101	0/0:32,0:32:90.19:0,90,3305	0/1:14,5:19:11.67:1936,0,12	1/1:34,2:21:57.19:1996,57,0	1/1:2,6:18:2.96:19,3,0	1/1:65,6:69:78.90:1388,79,0	0/0:37,0:37:99:0,105,4176	0/0:21,0:21:63.22:0,63,2734	0/0:55,0:55:99:0,151,6252	0/0:47,0:46:99:0,117,4770	0/1:7,27:51:40.17:4121,0,40	1/1:1,19:28:4.26:210,4,0	0/0:26,0:26:78.27:0,78,3491
chr10	97412221	.	C	CGT	1253.27	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=6.430;DP=1003;FS=4.859;HRun=0;HaplotypeScore=183.8991;InbreedingCoeff=0.6359;MQ=55.20;MQ0=21;MQRankSum=2.132;QD=8.58;ReadPosRankSum=-3.021;VQSLOD=2.6602;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:43,6:46:27.98:638,28,0	0/0:10,0:10:18.02:0,18,211	0/0:36,0:27:47.81:0,48,594	0/0:39,0:20:30.68:0,31,287	0/0:32,0:32:62.19:0,62,734	0/0:20,0:20:38.44:0,38,447	0/0:34,0:33:69:0,69,817	0/0:32,0:30:55:0,55,684	0/0:26,0:25:43.30:0,43,610	0/0:42,0:38:86.96:0,87,980	0/0:16,0:16:18.02:0,18,401	0/0:47,0:47:99:0,100,1216	0/0:48,0:47:97.50:0,98,1175	0/0:37,0:39:54.76:0,55,953	0/0:42,0:42:99:0,105,1268	0/0:47,0:47:99:0,122,1485	0/0:39,0:39:93.24:0,93,1137	1/1:23,1:22:34.55:725,35,0	0/0:27,0:22:15.72:0,16,452	0/1:25,0:23:10.16:10,0,178	0/0:116,0:108:55.20:0,55,1245	0/0:23,0:23:29.75:0,30,368	0/0:21,0:21:48.06:0,48,581	0/0:46,0:45:86.39:0,86,1147	0/0:32,0:31:55.42:0,55,701	0/1:48,0:42:13.28:13,0,907	0/0:28,0:28:45.18:0,45,570	0/0:14,0:14:36.10:0,36,440
chr10	97412232	.	TTG	T	277.21	PASS	AB=0.948;AC=11;AF=0.204;AN=54;BaseQRankSum=3.006;DP=977;FS=19.792;HRun=0;HaplotypeScore=181.6179;InbreedingCoeff=0.0156;MQ=53.92;MQ0=14;MQRankSum=1.663;QD=0.79;ReadPosRankSum=-1.607;VQSLOD=1.4480;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:47:23.55:0,24,174	0/0:8,0:8:10.83:0,11,120	./.	0/0:33,0:12:0:0,0,0	0/0:31,0:31:30.04:0,30,367	0/0:16,0:16:11.03:0,11,242	0/1:32,1:32:91.74:92,0,395	0/0:30,0:27:14.87:0,15,149	0/1:25,2:27:20.35:20,0,459	0/1:44,0:40:3.77:4,0,579	0/0:14,2:16:17.93:0,18,235	0/0:42,2:44:42.09:0,42,993	0/1:39,1:39:42.57:43,0,472	0/0:37,0:38:48.56:0,49,762	0/1:40,7:48:3.68:4,0,682	0/0:47,4:51:32.50:0,32,761	0/1:33,4:37:21.20:21,0,498	0/0:22,0:24:33.74:0,34,314	0/0:31,0:27:21.09:0,21,153	0/0:22,0:23:25.29:0,25,200	0/0:115,0:116:20.56:0,21,439	1/1:9,0:23:18.39:84,18,0	0/0:23,0:23:26.56:0,27,333	0/1:36,4:39:81.59:82,0,589	0/1:30,1:30:59.19:59,0,388	0/0:46,0:44:15.97:0,16,219	0/1:26,0:26:13.03:13,0,75	0/0:13,0:13:21.04:0,21,274
chr10	97414530	.	AGTGTGTGTGTGTGTGT	A	3182.49	PASS	AB=0.903;AC=10;AF=0.185;AN=54;BaseQRankSum=5.794;DP=664;FS=22.187;HRun=0;HaplotypeScore=277.0371;InbreedingCoeff=0.7064;MQ=60.60;MQ0=11;MQRankSum=-8.329;QD=24.48;ReadPosRankSum=-1.048;VQSLOD=1.1333;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:45:50.04:0,50,2742	0/0:9,0:11:24.08:0,24,1300	./.	0/0:34,0:22:11.83:0,12,150	0/0:21,0:21:33.11:0,33,1369	0/0:19,0:20:28.92:0,29,1683	0/0:25,0:25:36.10:0,36,1745	0/0:28,0:27:31.66:0,32,900	0/0:22,0:23:45.14:0,45,2473	0/0:20,0:20:42.14:0,42,2629	0/0:16,0:19:15.92:0,16,1027	0/0:12,0:15:15.05:0,15,782	0/0:18,0:19:39.12:0,39,1882	0/0:24,0:24:30.10:0,30,1599	0/0:29,0:30:53.64:0,54,3013	0/0:28,0:30:63.22:0,63,3515	0/0:23,0:23:23.94:0,24,1517	0/0:14,0:19:27.09:0,27,1182	1/1:18,2:20:8.39:272,8,0	1/1:10,2:12:9.03:375,9,0	0/1:29,2:31:99:355,0,101	0/0:20,0:21:26.12:0,26,1188	0/0:20,0:20:26.07:0,26,1385	0/0:31,0:37:59.52:0,60,3240	0/0:14,0:14:18.06:0,18,1094	1/1:17,5:21:4.15:704,4,0	1/1:20,11:31:45.12:1621,45,0	0/1:11,0:12:1.35:1,0,424
chr10	97415302	.	CGT	C	35.63	PASS	AB=0.970;AC=10;AF=0.238;AN=42;BaseQRankSum=1.414;DP=525;FS=3.340;HRun=0;HaplotypeScore=68.0763;InbreedingCoeff=0.2600;MQ=68.60;MQ0=20;MQRankSum=1.338;QD=0.23;ReadPosRankSum=0.253;VQSLOD=1.5581;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:3:32,3,0	./.	./.	./.	1/1:14,0:14:3.01:32,3,0	0/0:18,0:16:3.01:0,3,39	1/1:26,0:26:3.15:12,3,0	./.	0/0:13,0:12:5.95:0,6,62	0/0:16,0:15:3.01:0,3,40	0/0:3,1:4:3.01:0,3,36	0/1:20,0:19:7.52:8,0,60	0/0:13,0:13:1.68:0,2,42	0/0:11,0:10:3.01:0,3,44	0/0:14,0:14:5.79:0,6,67	./.	1/1:28,2:29:6.01:63,6,0	./.	0/0:13,0:13:5.96:0,6,44	./.	0/0:37,0:37:17.95:0,18,143	0/0:8,0:8:3.01:0,3,44	0/0:6,0:6:2.99:0,3,24	0/1:29,2:31:1.64:2,0,324	0/0:15,0:15:5.58:0,6,87	0/0:25,0:25:5.97:0,6,47	0/0:24,0:23:8.95:0,9,86	0/0:14,0:13:9.03:0,9,120
chr10	97415527	.	T	TG	208.17	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=7.921;DP=568;FS=5.831;HRun=0;HaplotypeScore=75.4959;InbreedingCoeff=0.4597;MQ=49.26;MQ0=78;MQRankSum=-5.546;QD=4.34;ReadPosRankSum=4.635;VQSLOD=2.7112;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:25:51.92:0,52,284	0/0:5,0:5:14.43:0,14,103	0/0:46,0:10:8.64:0,9,101	0/0:56,0:9:3.78:0,4,36	0/0:27,0:24:61.26:0,61,489	0/0:19,0:16:44.89:0,45,399	0/0:14,0:12:35.75:0,36,276	0/0:22,0:18:44.91:0,45,354	0/0:7,0:6:13.49:0,13,77	0/0:17,0:13:35.16:0,35,316	0/0:21,0:19:43.18:0,43,318	0/0:11,0:10:27.88:0,28,171	0/0:8,0:5:14.88:0,15,121	0/0:8,0:8:19.79:0,20,159	0/0:13,0:12:35.52:0,36,305	0/0:14,0:14:34.75:0,35,282	0/0:21,0:19:49.81:0,50,398	1/1:19,5:22:29.12:301,29,0	0/0:26,0:21:27.29:0,27,283	0/1:23,0:19:6.74:7,0,173	0/0:3,0:1:2.97:0,3,20	0/0:7,0:7:20.83:0,21,164	0/0:12,0:11:27.42:0,27,200	0/0:17,0:16:17.17:0,17,131	0/0:24,0:23:56.93:0,57,506	0/0:35,0:29:60.89:0,61,422	0/0:19,0:18:3.84:0,4,164	0/0:35,0:12:26.24:0,26,193
chr10	97415530	.	T	TG	448.05	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=8.897;DP=571;FS=0.000;HRun=0;HaplotypeScore=73.8617;InbreedingCoeff=0.5544;MQ=47.11;MQ0=80;MQRankSum=-6.953;QD=3.47;ReadPosRankSum=3.843;VQSLOD=2.7299;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,6:28:52.13:327,52,0	0/0:4,0:4:11.44:0,11,76	0/1:51,0:10:0.47:0,0,68	0/0:61,0:9:1.44:0,1,15	0/0:28,0:25:67.73:0,68,549	0/0:19,0:16:44.92:0,45,405	0/0:14,0:12:35.77:0,36,275	0/0:20,0:16:38.97:0,39,312	0/0:7,0:6:10.65:0,11,54	0/0:18,0:14:32.23:0,32,299	0/0:19,0:17:40.10:0,40,280	0/0:11,0:10:27.94:0,28,162	0/0:7,0:4:11.68:0,12,89	0/0:7,0:7:16.78:0,17,129	0/0:13,0:12:35.47:0,35,307	0/0:14,0:14:36.29:0,36,298	0/0:20,0:18:47.04:0,47,388	1/1:22,0:19:38.86:222,39,0	0/0:24,0:19:11.01:0,11,264	0/1:22,0:18:26.39:26,0,170	0/0:3,0:1:2.97:0,3,20	0/0:6,0:6:17.89:0,18,147	0/0:12,0:11:28.30:0,28,208	0/0:18,0:17:20.20:0,20,155	0/0:22,0:20:47.97:0,48,432	0/0:36,0:30:41.22:0,41,379	0/0:20,0:18:19.27:0,19,181	0/0:38,0:13:35.36:0,35,269
chr10	97415532	.	T	TGTTG	637.79	PASS	AB=0.872;AC=3;AF=0.054;AN=56;BaseQRankSum=8.329;DP=576;FS=5.393;HRun=0;HaplotypeScore=101.4846;InbreedingCoeff=0.4030;MQ=50.22;MQ0=80;MQRankSum=-5.196;QD=11.19;ReadPosRankSum=4.896;VQSLOD=2.4745;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:29,5:28:69.81:332,0,70	0/0:4,0:4:12.04:0,12,183	0/0:53,0:11:11.30:0,11,174	0/0:67,0:12:8.75:0,9,116	0/0:27,0:24:66.21:0,66,1030	0/0:17,0:14:39.11:0,39,622	0/0:14,0:12:36.11:0,36,534	0/0:22,0:18:40.02:0,40,618	0/0:6,0:5:12.01:0,12,134	0/0:18,0:14:35.17:0,35,612	0/0:18,0:16:38.70:0,39,461	0/0:11,0:10:29.57:0,30,377	0/0:8,0:5:12.03:0,12,189	0/0:7,0:7:18.02:0,18,266	0/0:13,0:12:36.10:0,36,568	0/0:12,0:12:33.56:0,34,497	0/0:20,0:18:45.01:0,45,731	1/1:22,0:20:5.39:399,5,0	0/0:25,0:20:40.89:0,41,549	0/0:22,0:18:29.05:0,29,346	0/0:3,0:1:3.01:0,3,40	0/0:6,0:6:18.06:0,18,282	0/0:11,0:10:27.09:0,27,402	0/0:19,0:18:23.81:0,24,309	0/0:22,0:20:48.16:0,48,811	0/0:35,0:29:50.92:0,51,730	0/0:20,0:18:20.58:0,21,227	0/0:39,0:14:39.12:0,39,559
chr10	97415550	.	G	GTT	1171.04	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=6.633;DP=579;FS=0.000;HRun=9;HaplotypeScore=90.4116;InbreedingCoeff=0.7831;MQ=65.64;MQ0=68;MQRankSum=-5.946;QD=11.95;ReadPosRankSum=4.310;VQSLOD=0.8917;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:28:38.91:0,39,415	0/1:3,0:3:0:0,0,0	0/0:54,0:20:40.95:0,41,393	0/0:61,0:19:0.03:0,0,166	0/0:22,0:20:40.91:0,41,403	0/0:12,0:10:14.99:0,15,160	0/0:14,0:12:17.66:0,18,172	0/0:28,0:25:48:0,48,511	0/0:11,0:10:11.92:0,12,127	0/0:13,0:10:14.22:0,14,158	0/0:17,0:15:17.94:0,18,191	0/0:12,0:11:15.59:0,16,187	0/0:13,0:11:17.56:0,18,174	0/0:14,0:14:33.08:0,33,351	0/0:21,0:20:14.32:0,14,249	0/0:6,0:6:5.70:0,6,63	0/0:18,0:18:16.54:0,17,189	0/0:27,0:25:35.95:0,36,379	1/1:17,4:17:15.52:233,16,0	1/1:12,6:15:19.89:281,20,0	1/1:6,0:4:9.03:139,9,0	0/0:11,0:11:23.53:0,24,247	0/0:7,0:7:12.01:0,12,128	0/0:25,0:25:44.45:0,44,460	0/0:16,0:14:26.59:0,27,277	1/1:25,8:27:0.91:369,1,0	1/1:10,7:15:23.51:306,24,0	0/0:46,0:22:50.91:0,51,517
chr10	97416323	.	G	GA	826.94	PASS	AB=0.914;AC=17;AF=0.304;AN=56;BaseQRankSum=6.594;DP=624;FS=7.028;HRun=13;HaplotypeScore=86.3461;InbreedingCoeff=0.5278;MQ=66.80;MQ0=4;MQRankSum=-0.394;QD=3.23;ReadPosRankSum=-3.109;VQSLOD=-0.1114;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:30:7.59:46,8,0	0/0:5,0:6:7.93:0,8,47	0/0:43,0:27:27.51:0,28,181	0/0:29,1:19:13.04:0,13,100	0/0:15,0:17:33.72:0,34,216	0/0:22,0:22:15.81:0,16,245	0/0:24,0:25:39.79:0,40,280	0/1:33,0:34:11.14:11,0,309	0/0:16,0:16:31.56:0,32,203	0/0:22,0:22:49.49:0,49,329	0/0:11,1:13:0.96:0,1,142	0/0:16,1:19:11.91:0,12,209	0/0:22,0:25:41.78:0,42,270	0/0:16,0:16:33.87:0,34,225	0/0:14,0:15:34.47:0,34,223	0/0:23,0:23:58.39:0,58,379	0/0:23,0:24:49.35:0,49,324	0/1:27,0:27:4.69:43,0,5	1/1:10,0:24:34.35:175,34,0	1/1:7,0:19:27.48:148,27,0	1/1:1,1:11:2.84:14,3,0	0/0:23,1:25:11.10:0,11,195	0/1:11,0:11:7.01:7,0,102	0/0:25,0:26:45.65:0,46,380	0/1:13,16:29:99:207,0,99	1/1:8,2:28:24.04:195,24,0	1/1:4,1:26:26.56:156,27,0	0/1:11,1:12:6.41:6,0,96
chr10	97417571	.	C	CCCCACA	12322.99	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-4.363;DP=710;FS=7.027;HRun=0;HaplotypeScore=143.4827;InbreedingCoeff=0.9970;MQ=87.67;MQ0=0;MQRankSum=-15.443;QD=66.25;ReadPosRankSum=-2.476;VQSLOD=4.7237;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,21:40:72.16:2133,72,0	0/0:15,0:15:42.12:0,42,911	0/0:29,0:29:81.26:0,81,1798	0/0:29,0:29:75.08:0,75,1376	0/0:18,0:18:48.16:0,48,1118	0/0:22,0:22:66.23:0,66,1523	0/0:22,0:22:66.19:0,66,1505	0/0:40,0:40:99:0,102,2352	0/0:26,0:26:75.21:0,75,1714	0/0:31,0:31:90.30:0,90,2038	0/0:17,0:17:51.13:0,51,1167	0/0:17,0:17:39.13:0,39,934	0/0:29,0:29:80.53:0,81,1934	0/0:29,0:29:84.29:0,84,1980	0/0:41,0:41:99:0,114,2685	0/0:24,0:24:69.24:0,69,1583	0/0:37,0:37:99:0,105,2431	1/1:3,9:12:33.11:1106,33,0	1/1:6,9:17:48.16:1333,48,0	1/1:4,19:26:60.21:2108,60,0	1/1:13,16:32:36.12:1257,36,0	0/0:25,0:25:69.23:0,69,1620	0/0:18,0:18:51.17:0,51,1188	0/0:27,0:27:78.21:0,78,1769	0/0:22,0:22:66.18:0,66,1460	1/1:5,18:25:72.22:2201,72,0	1/1:9,16:33:63.22:2185,63,0	0/0:6,0:6:15.05:0,15,349
chr10	97418057	.	TC	T	1721.98	PASS	AB=0.737;AC=7;AF=0.125;AN=56;BaseQRankSum=12.828;DP=780;FS=13.798;HRun=2;HaplotypeScore=233.6168;InbreedingCoeff=-0.1433;MQ=55.45;MQ0=8;MQRankSum=-12.486;QD=9.90;ReadPosRankSum=1.263;VQSLOD=-0.2195;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,9:19:99:265,0,174	0/0:10,0:10:27.04:0,27,349	0/0:41,1:12:25.53:0,26,240	0/0:42,0:13:17.84:0,18,216	0/0:30,0:30:90.29:0,90,1328	0/0:30,0:29:73.32:0,73,1101	0/0:25,0:24:66.20:0,66,949	0/0:31,0:31:77.83:0,78,1228	0/0:37,0:37:99:0,105,1524	0/0:33,0:33:99:0,99,1433	0/0:24,0:24:66.22:0,66,986	0/0:22,0:22:57.18:0,57,833	0/0:31,0:31:77.83:0,78,1092	0/0:32,0:32:90.29:0,90,1325	0/0:34,0:34:99:0,99,1440	0/0:26,0:26:78.14:0,78,1120	0/0:35,0:35:84.20:0,84,1213	0/1:9,8:17:99:278,0,165	0/1:11,6:16:99:210,0,199	0/1:21,11:32:99:316,0,527	0/1:10,3:13:26.28:26,0,142	0/0:21,0:21:57.18:0,57,835	0/0:23,0:23:66.19:0,66,926	0/0:23,0:23:57.19:0,57,846	0/0:35,0:35:99:0,102,1509	0/1:23,13:35:99:425,0,496	0/1:28,12:40:99:333,0,853	0/0:19,0:19:51.17:0,51,764
chr10	97418067	.	TC	T	19817.67	PASS	AB=0.818;AC=53;AF=0.946;AN=56;BaseQRankSum=-5.186;DP=754;FS=13.272;HRun=3;HaplotypeScore=177.8384;InbreedingCoeff=-0.0479;MQ=56.30;MQ0=5;MQRankSum=4.113;QD=26.28;ReadPosRankSum=3.041;VQSLOD=2.8016;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,1:17:11.25:165,11,0	1/1:0,10:10:21.07:260,21,0	0/1:28,11:12:5.80:183,0,6	0/1:32,3:11:24.57:120,0,25	1/1:0,32:32:87.24:1061,87,0	1/1:2,27:29:76.48:938,76,0	1/1:0,22:22:63.20:781,63,0	1/1:0,36:36:99:1265,105,0	1/1:2,33:35:93.29:1152,93,0	1/1:0,33:33:99:1215,99,0	1/1:0,22:22:57.18:706,57,0	1/1:2,20:22:57.18:702,57,0	1/1:1,29:30:72.07:892,72,0	1/1:2,31:33:84.09:1041,84,0	1/1:0,33:33:96.29:1180,96,0	1/1:1,26:27:78.24:967,78,0	1/1:1,37:39:83.75:1013,84,0	1/1:14,4:18:33.24:217,33,0	1/1:10,5:14:10.54:173,11,0	1/1:25,5:30:70.28:566,70,0	0/1:7,3:10:1.98:87,0,2	1/1:0,21:21:51.13:626,51,0	1/1:0,16:16:48.15:594,48,0	1/1:0,26:26:66.21:818,66,0	1/1:1,32:33:93.29:1153,93,0	1/1:28,8:35:80.34:615,80,0	1/1:24,9:33:81.94:697,82,0	1/1:0,20:20:51.16:632,51,0
chr10	97418068	.	C	CCT	2880.56	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=11.015;DP=759;FS=1.976;HRun=0;HaplotypeScore=257.0191;InbreedingCoeff=0.5578;MQ=56.18;MQ0=6;MQRankSum=-13.847;QD=10.29;ReadPosRankSum=-2.466;VQSLOD=2.9490;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,2:18:29.55:342,30,0	0/0:10,0:10:18.16:0,18,69	0/1:41,0:13:2.74:3,0,49	0/0:38,0:11:1.51:0,2,73	0/0:32,0:32:52.13:0,52,238	0/0:29,0:28:40.26:0,40,214	0/1:22,0:22:33.85:34,0,114	0/1:37,0:37:72.56:73,0,151	0/0:35,0:35:66.66:0,67,272	0/0:33,0:33:9.45:0,9,210	0/0:22,0:22:48.95:0,49,182	0/0:23,0:23:50.91:0,51,191	0/0:30,0:30:61.67:0,62,230	0/0:32,0:32:65.97:0,66,250	0/0:33,0:33:41.28:0,41,254	0/0:27,0:27:17.82:0,18,178	0/0:39,0:39:62.51:0,63,248	1/1:14,3:17:31.45:352,31,0	1/1:15,0:14:21.24:259,21,0	1/1:30,0:30:64.26:613,64,0	0/1:10,0:10:9.29:88,0,9	0/1:21,0:21:23.12:23,0,101	0/0:16,0:16:40.98:0,41,153	0/0:26,0:26:56.74:0,57,212	0/0:32,0:32:79.89:0,80,298	1/1:36,0:35:67.33:572,67,0	1/1:33,0:33:81.31:714,81,0	0/0:22,0:22:5.41:0,5,119
chr10	97418069	.	CCTCCTTTT	C	9283.54	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=9.410;DP=749;FS=1.475;HRun=0;HaplotypeScore=306.7443;InbreedingCoeff=0.7150;MQ=56.31;MQ0=6;MQRankSum=-14.117;QD=39.34;ReadPosRankSum=-2.790;VQSLOD=3.8283;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,2:18:32.64:973,33,0	0/0:10,0:10:21.07:0,21,572	0/0:39,0:13:30.55:0,31,510	0/1:38,0:12:5.82:6,0,257	0/0:32,0:32:75.87:0,76,2092	0/0:29,0:28:72.45:0,72,1984	0/1:22,0:22:37.65:38,0,1108	0/0:37,0:37:6.65:0,7,1955	0/0:33,0:33:63.61:0,64,2189	0/0:33,0:33:13.78:0,14,2228	0/0:22,0:22:47.32:0,47,1410	0/0:22,0:22:60.21:0,60,1517	0/0:29,0:29:61.50:0,62,1809	0/0:32,0:32:86.98:0,87,2195	0/0:34,0:34:35.94:0,36,2305	0/0:27,0:27:31.38:0,31,1778	0/0:38,0:38:81.19:0,81,2084	1/1:14,2:16:36.11:694,36,0	1/1:13,1:13:39.09:799,39,0	1/1:20,9:29:84.29:1961,84,0	1/1:9,0:10:3.36:319,3,0	0/1:21,0:21:17:17,0,1111	0/0:16,0:16:48.16:0,48,1168	0/0:26,0:26:66.23:0,66,1763	0/0:32,0:32:83.61:0,84,2418	1/1:25,11:35:19.67:2238,20,0	1/1:23,9:32:93.30:2239,93,0	0/0:22,0:22:20.03:0,20,1183
chr10	97418070	.	CTCCTTTTT	C	9071.16	PASS	AB=0.828;AC=14;AF=0.250;AN=56;BaseQRankSum=14.201;DP=751;FS=5.987;HRun=0;HaplotypeScore=308.5163;InbreedingCoeff=0.8028;MQ=56.33;MQ0=6;MQRankSum=-14.947;QD=47.49;ReadPosRankSum=-1.048;VQSLOD=3.3552;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,11:17:39.13:1085,39,0	0/0:10,0:10:21.07:0,21,731	0/0:37,0:13:31.56:0,32,680	0/1:36,0:12:7.27:7,0,337	0/0:32,0:32:90.78:0,91,2770	0/0:29,0:28:77.45:0,77,2564	0/0:22,0:22:37.85:0,38,1584	0/0:38,0:38:88.11:0,88,2932	0/0:33,0:33:88.84:0,89,2904	0/0:33,0:33:72.65:0,73,3117	0/0:23,0:23:60.10:0,60,1954	0/0:21,0:22:60.21:0,60,1934	0/0:29,0:29:72.11:0,72,2344	0/0:32,0:32:87.30:0,87,2858	0/0:34,0:34:53.93:0,54,3083	0/0:27,0:27:68.68:0,69,2418	0/0:38,0:38:83.31:0,83,2689	1/1:11,4:16:35.15:769,35,0	1/1:7,7:13:35.40:848,35,0	1/1:17,12:29:83.75:1873,84,0	1/1:6,3:10:2.24:295,2,0	0/0:21,0:21:18.71:0,19,1489	0/0:16,0:16:48.16:0,48,1533	0/0:27,0:27:69.24:0,69,2294	0/0:32,0:32:93.23:0,93,3167	0/1:21,15:35:6.05:2118,0,6	1/1:19,12:31:90.13:2076,90,0	0/0:23,0:23:46.83:0,47,1692
chr10	97418071	.	TC	T	1452.41	PASS	AB=0.907;AC=13;AF=0.232;AN=56;BaseQRankSum=16.091;DP=746;FS=3.223;HRun=3;HaplotypeScore=240.5919;InbreedingCoeff=0.7139;MQ=56.40;MQ0=6;MQRankSum=-15.344;QD=7.77;ReadPosRankSum=1.375;VQSLOD=0.8895;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,1:17:33.29:178,33,0	0/0:10,0:10:18.81:0,19,80	0/0:36,1:13:25.02:0,25,174	0/1:35,0:12:6.59:7,0,73	0/0:32,0:32:69.48:0,69,332	0/0:29,0:28:72.57:0,73,341	0/0:22,0:22:56.01:0,56,277	0/0:38,0:38:99:0,100,659	0/0:32,0:32:78.09:0,78,374	0/0:33,0:33:94.75:0,95,662	0/0:22,0:22:56.64:0,57,285	0/0:22,0:22:33.67:0,34,252	0/0:30,0:30:57.53:0,58,284	0/0:32,0:32:67.58:0,68,389	0/0:34,0:34:71.29:0,71,433	0/0:27,0:27:77.30:0,77,416	0/0:38,0:38:60.56:0,61,303	0/1:14,2:16:25.14:135,0,25	1/1:14,0:13:24.96:134,25,0	1/1:26,1:27:61.02:314,61,0	0/1:8,2:10:21.87:44,0,22	0/0:21,0:21:41.97:0,42,198	0/0:16,0:16:33.51:0,34,176	0/0:28,0:28:45.80:0,46,238	0/0:32,0:32:88.52:0,89,445	1/1:33,3:35:79.75:442,80,0	1/1:29,2:31:73.03:382,73,0	0/0:23,0:23:56.29:0,56,316
chr10	97418073	.	CT	C	1068.01	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=15.681;DP=743;FS=5.400;HRun=5;HaplotypeScore=243.6812;InbreedingCoeff=0.6628;MQ=56.06;MQ0=7;MQRankSum=-15.779;QD=7.03;ReadPosRankSum=1.838;VQSLOD=-0.7275;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:30.87:141,31,0	0/0:11,0:11:24.04:0,24,264	0/0:38,1:13:20.58:0,21,281	0/0:35,0:12:9.54:0,10,163	0/0:31,0:31:90.10:0,90,1002	0/0:27,0:27:76.91:0,77,905	0/0:23,0:23:57.02:0,57,626	0/0:36,0:36:99:0,99,1238	0/0:32,0:32:87.16:0,87,1037	0/0:32,0:32:90.28:0,90,1188	0/0:21,0:21:57.15:0,57,696	0/0:23,0:23:57.12:0,57,686	0/0:30,0:30:72.15:0,72,834	0/0:31,0:31:86.99:0,87,1030	0/0:34,0:34:93.53:0,94,1163	0/0:27,0:27:75.23:0,75,934	0/0:39,0:39:86.86:0,87,969	0/1:17,0:17:30.33:30,0,44	0/1:13,0:12:11.31:32,0,11	1/1:26,3:29:35.06:214,35,0	0/1:9,0:9:16.61:34,0,17	0/0:21,0:21:51.12:0,51,587	0/0:16,0:16:47.50:0,47,545	0/0:26,0:26:71.76:0,72,759	0/0:32,0:32:90.28:0,90,1120	1/1:34,2:35:54.04:324,54,0	1/1:26,5:31:72.81:465,73,0	0/0:23,0:23:57.17:0,57,698
chr10	97418086	.	C	CT	724.93	PASS	AB=0.882;AC=7;AF=0.125;AN=56;BaseQRankSum=8.646;DP=759;FS=3.840;HRun=1;HaplotypeScore=243.8699;InbreedingCoeff=-0.1413;MQ=54.36;MQ0=5;MQRankSum=-9.069;QD=3.90;ReadPosRankSum=-0.591;VQSLOD=-0.1708;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,2:19:78.31:78,0,328	0/0:11,0:11:33.06:0,33,409	0/1:29,0:15:3.82:4,0,271	0/0:36,0:13:18.01:0,18,203	0/0:31,0:31:93.29:0,93,1193	0/0:26,0:25:65.39:0,65,916	0/0:20,0:19:51.17:0,51,662	0/0:35,0:35:90.27:0,90,1144	0/0:28,0:28:84.27:0,84,1089	0/0:32,0:32:90.29:0,90,1157	0/0:20,0:20:60.19:0,60,776	0/0:30,0:30:81.26:0,81,1051	0/0:26,0:26:69.21:0,69,881	0/0:40,0:40:99:0,111,1411	0/0:32,0:32:93.25:0,93,1169	0/0:25,0:25:75.21:0,75,932	0/0:39,0:39:96:0,96,1187	0/1:14,4:18:99:140,0,281	0/0:16,0:15:5.78:0,6,436	0/1:32,3:35:99:136,0,572	0/1:6,3:9:50.12:50,0,60	0/0:21,0:21:60.18:0,60,764	0/0:22,0:22:60.19:0,60,778	0/0:29,0:29:78.22:0,78,980	0/0:34,0:34:99:0,99,1265	0/1:35,5:39:99:241,0,698	0/1:32,3:35:99:202,0,577	0/0:20,0:20:57.16:0,57,723
chr10	97418129	.	TTCTTCC	T	4010.85	PASS	AB=0.656;AC=8;AF=0.143;AN=56;BaseQRankSum=9.921;DP=778;FS=3.237;HRun=0;HaplotypeScore=229.0224;InbreedingCoeff=0.7033;MQ=59.86;MQ0=7;MQRankSum=-11.446;QD=28.05;ReadPosRankSum=0.351;VQSLOD=3.3379;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:31.28:0,31,1567	0/0:10,0:10:27.09:0,27,835	0/0:42,0:22:33.10:0,33,778	0/0:32,0:19:12.89:0,13,413	0/0:39,0:39:90.29:0,90,2562	0/0:19,0:20:42.13:0,42,1275	0/0:24,0:23:57.20:0,57,1715	0/0:19,0:18:39.13:0,39,1023	0/0:22,0:22:54.19:0,54,1637	0/0:34,0:34:87.29:0,87,2650	0/0:20,0:20:54.18:0,54,1619	0/0:27,0:27:72.25:0,72,2247	0/0:32,0:32:81.09:0,81,2281	0/0:34,0:34:84.27:0,84,2527	0/0:29,0:29:75.22:0,75,1926	0/0:26,0:26:66.21:0,66,1971	0/0:31,0:31:72.25:0,72,2289	0/0:25,0:25:49.54:0,50,1750	0/1:15,12:26:92.56:408,0,93	1/1:11,26:37:74.55:1410,75,0	0/1:7,11:18:22.43:107,0,22	0/0:31,0:31:78.21:0,78,2334	0/0:28,0:28:69.24:0,69,2241	0/0:36,0:37:92.14:0,92,2417	0/0:27,0:27:63.20:0,63,1839	1/1:12,19:30:38.04:1004,38,0	1/1:12,18:30:49.08:1081,49,0	0/0:18,0:18:36.12:0,36,1034
chr10	97418382	.	GTA	G	7637.56	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.721;DP=808;FS=0.638;HRun=0;HaplotypeScore=97.2378;InbreedingCoeff=0.9721;MQ=75.17;MQ0=1;MQRankSum=-2.602;QD=37.08;ReadPosRankSum=0.894;VQSLOD=6.6955;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,53:53:99:1942,132,0	0/0:9,0:9:27.09:0,27,505	0/0:15,0:15:33.07:0,33,549	0/0:16,0:16:37.64:0,38,569	0/0:24,0:24:69.21:0,69,1258	0/0:21,0:21:60.21:0,60,1123	0/0:33,0:33:96.29:0,96,1731	0/0:32,0:32:93.30:0,93,1670	0/0:33,0:33:99:0,99,1822	0/0:36,0:36:99:0,108,2022	0/0:11,0:11:33.11:0,33,610	0/0:32,0:32:93.32:0,93,1742	0/0:33,0:33:99:0,99,1820	0/0:49,0:49:99:0,144,2656	0/0:47,0:47:99:0,141,2626	0/0:44,0:44:99:0,129,2385	0/0:41,0:41:99:0,120,2246	1/1:2,13:15:33.11:486,33,0	1/1:0,30:30:84.24:1167,84,0	1/1:0,23:23:57.19:837,57,0	1/1:4,33:37:96.32:1408,96,0	0/0:16,0:16:45.15:0,45,834	0/0:23,0:23:69.21:0,69,1220	0/0:46,0:46:99:0,123,2303	0/0:25,0:25:75.26:0,75,1403	1/1:1,20:21:3.99:783,4,0	1/1:2,24:26:69.23:1015,69,0	0/0:16,0:16:48.16:0,48,896
chr10	97424101	.	CTGTG	C	441.60	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=3.863;DP=620;FS=20.970;HRun=0;HaplotypeScore=103.1531;InbreedingCoeff=0.7270;MQ=68.20;MQ0=7;MQRankSum=1.046;QD=4.46;ReadPosRankSum=0.537;VQSLOD=0.6254;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:32.89:0,33,620	0/0:10,0:10:14.75:0,15,225	./.	./.	0/0:20,0:20:2.99:0,3,24	0/0:19,0:19:24.06:0,24,457	0/0:35,0:34:36.10:0,36,741	0/0:23,0:23:5.81:0,6,82	0/0:14,0:14:12.04:0,12,278	0/0:19,0:18:15.05:0,15,317	0/0:17,0:17:8.81:0,9,184	0/0:21,0:21:36.10:0,36,728	0/0:28,0:28:24.06:0,24,476	0/0:22,0:22:15.04:0,15,300	0/0:24,0:24:18.03:0,18,326	0/0:21,0:21:21.06:0,21,434	0/0:38,0:39:46.64:0,47,862	0/0:15,0:19:11.22:0,11,59	1/1:13,1:14:3.01:47,3,0	1/1:10,3:14:9.03:140,9,0	1/1:31,7:37:12.03:186,12,0	0/0:18,0:17:14.56:0,15,275	0/0:6,0:7:11.76:0,12,155	0/0:38,0:41:68.22:0,68,1279	0/0:9,0:8:2.79:0,3,66	1/1:15,4:18:2.91:46,3,0	1/1:10,3:14:12.03:167,12,0	0/0:11,0:10:14.78:0,15,248
chr10	97424650	.	T	TAA	252.26	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.642;DP=448;FS=3.257;HRun=7;HaplotypeScore=57.4430;InbreedingCoeff=0.9501;MQ=76.25;MQ0=0;MQRankSum=-3.497;QD=16.82;ReadPosRankSum=0.679;VQSLOD=0.5628;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:74.77:0,75,833	0/0:9,0:9:21.06:0,21,245	0/0:16,0:16:28.88:0,29,308	0/0:6,0:6:12.03:0,12,140	0/0:18,0:18:42.09:0,42,478	0/0:18,0:18:39.08:0,39,444	0/0:15,0:16:38.85:0,39,431	0/0:24,0:24:60.15:0,60,688	0/0:16,0:16:36.07:0,36,396	0/0:19,0:19:41.94:0,42,481	0/0:8,0:8:21.06:0,21,245	0/0:22,0:22:48.11:0,48,548	0/0:14,0:14:33.05:0,33,362	0/0:12,0:12:24.06:0,24,280	0/0:8,0:8:24.07:0,24,279	0/0:18,0:18:51.15:0,51,594	0/0:20,0:20:51.15:0,51,593	1/1:3,11:15:21.07:344,21,0	0/0:10,0:10:24.01:0,24,263	0/0:12,0:12:33.09:0,33,384	0/0:20,0:20:45.11:0,45,524	0/0:17,0:17:45.12:0,45,524	0/0:13,0:13:30.08:0,30,350	0/0:21,0:21:51.11:0,51,572	0/0:15,0:15:36.04:0,36,387	0/0:12,0:12:27.07:0,27,314	0/0:21,0:21:63.19:0,63,734	0/0:18,0:18:48.13:0,48,559
chr10	97424788	.	GAC	G	360.06	PASS	AB=0.930;AC=18;AF=0.346;AN=52;BaseQRankSum=3.336;DP=578;FS=2.655;HRun=0;HaplotypeScore=75.3213;InbreedingCoeff=-0.2173;MQ=65.06;MQ0=4;MQRankSum=-0.851;QD=1.06;ReadPosRankSum=0.253;VQSLOD=1.6581;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,2:38:23.68:203,24,0	0/0:3,0:4:5.98:0,6,47	./.	./.	0/1:11,0:11:5.64:6,0,140	0/1:19,2:21:11.30:11,0,201	0/1:20,2:22:20.29:20,0,121	0/0:24,0:24:5.59:0,6,26	0/1:15,3:18:20.29:20,0,121	0/1:13,0:12:1.23:1,0,120	0/0:9,0:9:3.01:0,3,43	0/1:14,1:15:14.40:14,0,114	0/1:18,0:19:10.86:11,0,137	0/0:23,0:24:15.95:0,16,365	0/0:21,0:21:29.99:0,30,382	0/1:14,0:14:29.51:30,0,283	0/1:32,5:37:54.46:54,0,351	1/1:15,0:19:8.11:41,8,0	0/1:18,1:19:11.27:11,0,170	0/0:10,0:12:8.94:0,9,114	0/0:38,0:49:23.26:0,23,250	0/1:16,0:16:14.20:14,0,183	0/1:14,4:17:46.59:47,0,159	0/1:40,1:41:16.84:17,0,407	0/1:14,4:18:11.29:11,0,200	0/0:15,0:23:35.98:0,36,362	0/0:8,0:16:15:0,15,146	0/0:7,0:7:3.01:0,3,44
chr10	97427181	.	AGT	A	1202.08	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.416;DP=716;FS=12.301;HRun=0;HaplotypeScore=97.0708;InbreedingCoeff=0.9994;MQ=98.84;MQ0=0;MQRankSum=-5.901;QD=34.35;ReadPosRankSum=2.399;VQSLOD=5.7254;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:90.24:1297,90,0	0/0:11,0:11:33.11:0,33,616	0/0:41,0:41:99:0,108,1846	0/0:33,0:33:82.45:0,82,1330	0/0:27,0:27:78.25:0,78,1428	0/0:23,0:23:66.21:0,66,1183	0/0:18,0:18:54.19:0,54,1011	0/0:31,0:31:90.30:0,90,1623	0/0:25,0:25:75.23:0,75,1322	0/0:26,0:26:75.26:0,75,1401	0/0:20,0:20:60.19:0,60,1078	0/0:27,0:27:81.26:0,81,1477	0/0:22,0:22:63.19:0,63,1131	0/0:24,0:24:72.23:0,72,1317	0/0:29,0:29:87.28:0,87,1590	0/0:30,0:30:84.27:0,84,1541	0/0:23,0:23:69.24:0,69,1283	0/0:21,0:21:63.19:0,63,1134	0/0:24,0:24:69.23:0,69,1222	0/0:14,0:14:36.08:0,36,580	0/0:44,0:44:99:0,132,2400	0/0:30,0:30:87.28:0,87,1581	0/0:29,0:29:84.27:0,84,1534	0/0:23,0:23:66.23:0,66,1236	0/0:21,0:21:63.19:0,63,1117	0/0:18,0:18:51.17:0,51,955	0/0:36,0:35:99:0,108,1935	0/0:11,0:11:33.11:0,33,617
chr10	97427952	.	AC	A	500.56	PASS	AB=0.915;AC=13;AF=0.232;AN=56;BaseQRankSum=-1.159;DP=501;FS=0.646;HRun=11;HaplotypeScore=109.8866;InbreedingCoeff=-0.0507;MQ=67.26;MQ0=1;MQRankSum=3.360;QD=2.71;ReadPosRankSum=1.502;VQSLOD=0.2027;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:87.88:0,88,411	0/0:6,0:6:2.99:0,3,32	0/0:18,0:19:17.20:0,17,155	0/1:11,1:13:5.38:5,0,70	0/1:10,0:10:12.59:13,0,68	0/0:16,1:17:21.01:0,21,196	0/1:14,2:16:19.22:19,0,210	0/1:20,0:20:0.65:1,0,170	0/1:11,2:13:3.62:4,0,153	0/0:15,0:15:14.95:0,15,145	0/0:17,0:17:5.99:0,6,50	0/1:15,2:17:2.71:3,0,152	0/1:11,1:12:2.38:2,0,141	0/0:19,0:19:6.24:0,6,178	0/1:11,2:13:9.60:10,0,99	0/1:16,0:16:6.43:6,0,142	0/0:18,0:18:39.05:0,39,385	1/1:10,21:31:39.87:530,40,0	0/0:13,0:13:16.75:0,17,80	0/0:21,0:21:44.03:0,44,202	0/0:26,0:26:21.22:0,21,95	0/0:16,0:16:18:0,18,167	0/1:7,2:9:18.63:19,0,26	0/0:26,0:25:36.77:0,37,354	0/1:14,1:15:27.96:28,0,133	0/0:21,0:21:42.30:0,42,201	0/0:30,0:30:80.75:0,81,378	0/0:8,0:8:18.48:0,18,171
chr10	97427958	.	C	CCG	5221.57	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=12.357;DP=498;FS=19.341;HRun=0;HaplotypeScore=109.4156;InbreedingCoeff=0.8885;MQ=62.63;MQ0=1;MQRankSum=-7.941;QD=32.23;ReadPosRankSum=5.997;VQSLOD=4.8914;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,28:44:99:1562,120,0	0/0:6,0:6:11.75:0,12,106	0/0:18,0:18:39.59:0,40,397	0/1:11,0:10:18.06:18,0,179	0/0:10,0:10:17.96:0,18,159	0/0:16,0:16:30.03:0,30,319	0/0:15,0:15:33.05:0,33,393	0/0:19,0:19:43.39:0,43,450	0/0:15,0:15:38.97:0,39,381	0/0:12,0:12:23.95:0,24,267	0/0:16,0:16:24.03:0,24,205	0/0:19,0:19:32.64:0,33,323	0/0:14,0:14:31.57:0,32,298	0/0:19,0:19:44.04:0,44,369	0/0:11,0:11:27:0,27,270	0/0:17,0:17:32.98:0,33,346	0/0:19,0:19:51.07:0,51,593	0/0:32,0:32:86.85:0,87,733	1/1:3,6:9:21.01:310,21,0	1/1:5,16:21:50.81:754,51,0	1/1:15,12:27:44.91:566,45,0	0/0:15,0:15:39:0,39,374	0/0:13,0:13:15:0,15,145	0/0:26,0:25:60.24:0,60,665	0/0:16,0:16:36:0,36,377	1/1:12,7:19:53.66:641,54,0	1/1:3,25:30:87.14:1370,87,0	0/0:8,0:8:23.80:0,24,241
chr10	97428003	.	T	TA	7627.80	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.289;DP=598;FS=18.438;HRun=1;HaplotypeScore=88.5304;InbreedingCoeff=0.9595;MQ=72.06;MQ0=0;MQRankSum=-8.416;QD=40.36;ReadPosRankSum=0.793;VQSLOD=2.9735;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,50:50:99:2012,138,0	0/0:8,0:8:2.09:0,2,251	0/0:31,0:31:87.26:0,87,1093	0/0:23,0:23:66.21:0,66,857	0/0:18,0:18:54.18:0,54,701	0/0:10,0:10:30.10:0,30,390	0/0:19,0:19:54.18:0,54,701	0/0:23,0:23:63.20:0,63,806	0/0:17,0:17:51.15:0,51,637	0/0:13,0:13:39.12:0,39,498	0/0:15,0:15:45.15:0,45,584	0/0:18,0:18:54.14:0,54,670	0/0:21,0:21:63.20:0,63,818	0/0:14,0:14:39.13:0,39,506	0/0:18,0:18:54.18:0,54,701	0/0:25,0:25:72.23:0,72,934	0/0:23,0:23:69.22:0,69,888	0/0:31,0:31:93.30:0,93,1205	1/1:1,14:15:39.12:564,39,0	1/1:3,25:28:72.20:1043,72,0	1/1:4,33:37:99:1445,99,0	0/0:14,0:14:42.13:0,42,540	0/0:17,0:17:51.17:0,51,659	0/0:28,0:28:84.27:0,84,1090	0/0:16,0:15:48.13:0,48,607	1/1:0,23:23:69.23:1023,69,0	1/1:3,33:36:99:1542,105,0	0/0:7,0:7:21.07:0,21,273
chr10	97429045	.	T	TA	332.03	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.063;DP=486;FS=3.184;HRun=10;HaplotypeScore=71.8207;InbreedingCoeff=0.6636;MQ=76.15;MQ0=0;MQRankSum=0.584;QD=7.06;ReadPosRankSum=1.477;VQSLOD=1.7981;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:42:99:0,113,868	0/0:10,0:10:29.93:0,30,240	0/1:26,0:22:4.67:5,0,170	0/0:16,0:14:25.49:0,25,181	0/0:29,0:29:80.88:0,81,661	0/0:19,0:19:44.52:0,45,355	0/0:18,0:19:52.96:0,53,421	0/0:20,1:22:20.93:0,21,360	0/0:9,0:9:20.96:0,21,172	0/0:19,0:19:47.92:0,48,394	0/0:20,0:20:53.92:0,54,441	0/0:20,0:20:56.90:0,57,462	0/0:21,0:21:47.90:0,48,391	0/0:16,0:16:38.95:0,39,320	0/0:15,0:15:35.93:0,36,292	0/0:13,0:15:34.02:0,34,255	0/0:31,0:31:89.90:0,90,739	1/1:3,17:20:20.49:423,20,0	0/0:14,0:14:32.79:0,33,270	0/0:13,0:13:35.94:0,36,291	0/0:5,0:5:14.98:0,15,123	0/0:9,0:9:23.97:0,24,197	0/0:12,0:12:29.80:0,30,231	0/0:17,0:17:47.91:0,48,389	0/0:18,0:18:41.90:0,42,338	0/0:11,0:11:26.97:0,27,221	0/0:14,0:14:26.93:0,27,221	0/0:3,0:3:8.99:0,9,74
chr10	97430139	.	CCA	C	1393.53	PASS	AB=0.865;AC=27;AF=0.519;AN=52;BaseQRankSum=6.781;DP=628;FS=0.000;HRun=0;HaplotypeScore=81.1236;InbreedingCoeff=-0.1800;MQ=64.11;MQ0=13;MQRankSum=0.205;QD=2.97;ReadPosRankSum=0.296;VQSLOD=1.6689;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,13:38:18.27:218,0,18	0/1:5,0:6:18.99:19,0,78	./.	./.	0/0:13,0:13:15.05:0,15,216	0/1:21,1:22:8.87:9,0,269	0/1:25,4:29:11.01:11,0,353	0/0:31,0:31:15.29:0,15,150	0/0:23,0:23:18.03:0,18,244	0/1:21,0:21:14.54:15,0,142	0/1:10,2:12:20.92:21,0,116	1/1:15,7:23:14.66:145,15,0	0/1:19,0:21:99:111,0,177	1/1:5,5:12:8.75:80,9,0	0/1:20,2:22:43.11:43,0,263	0/1:16,3:20:65.78:66,0,245	0/1:24,1:25:66.78:67,0,388	0/0:13,0:25:17.99:0,18,157	1/1:7,0:8:4.04:17,4,0	1/1:19,12:31:20.72:192,21,0	0/1:32,27:59:23.91:177,0,24	0/1:14,4:17:15.22:15,0,171	0/1:17,2:19:44.78:45,0,176	0/1:26,3:29:40.75:41,0,385	0/0:22,0:22:20.70:0,21,313	1/1:22,3:26:11.85:105,12,0	1/1:12,2:15:14.85:136,15,0	0/1:5,1:7:32.04:32,0,120
chr10	97430935	.	TTGTGTGTGTGTGTG	T	224.60	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.476;DP=812;FS=4.778;HRun=0;HaplotypeScore=295.3618;InbreedingCoeff=0.8094;MQ=68.88;MQ0=15;MQRankSum=-3.371;QD=4.01;ReadPosRankSum=-2.178;VQSLOD=1.9003;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,30:56:18.53:315,19,0	0/0:11,0:11:24.08:0,24,878	0/0:41,0:21:3.01:0,3,45	0/0:56,0:27:14.31:0,14,291	0/0:28,0:28:54.02:0,54,2176	0/0:16,0:18:27.09:0,27,1456	0/0:34,0:35:81.20:0,81,2975	0/0:31,0:31:33.11:0,33,724	0/0:29,0:28:42.13:0,42,1758	0/0:20,0:20:48.16:0,48,1944	0/0:15,0:15:35.85:0,36,1332	0/0:27,0:27:51.17:0,51,1769	0/0:27,0:27:53.85:0,54,1914	0/0:29,0:29:60.14:0,60,2053	0/0:22,0:24:57.16:0,57,1977	0/0:32,0:32:54.19:0,54,2648	0/0:23,0:26:57.20:0,57,2380	0/0:39,0:39:67.34:0,67,1337	0/0:19,0:21:24.04:0,24,602	0/0:9,0:16:14.85:0,15,373	0/0:59,0:63:71.28:0,71,2257	0/0:14,0:15:27.09:0,27,1159	0/0:18,0:18:21.07:0,21,1053	0/0:43,0:45:99:0,105,4722	0/0:25,0:26:48.62:0,49,2112	0/0:21,0:23:30.05:0,30,499	0/0:12,0:22:27.05:0,27,768	0/0:10,0:13:27.07:0,27,769
chr10	97431968	.	A	AT	336.34	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.646;DP=595;FS=0.971;HRun=9;HaplotypeScore=60.2179;InbreedingCoeff=0.9859;MQ=73.37;MQ0=0;MQRankSum=0.365;QD=22.42;ReadPosRankSum=-0.734;VQSLOD=4.1830;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:62.95:0,63,541	0/0:7,0:7:18:0,18,156	0/0:14,0:13:26.96:0,27,233	0/0:13,0:12:21.20:0,21,169	0/0:30,1:31:53.80:0,54,696	0/0:18,0:17:47.99:0,48,417	0/0:15,0:15:41.99:0,42,365	0/0:26,0:26:59.94:0,60,516	0/0:15,0:15:32.99:0,33,286	0/0:30,1:31:50.80:0,51,670	0/0:29,0:29:86.98:0,87,755	0/0:19,0:19:50.98:0,51,443	0/0:25,0:25:65.97:0,66,569	0/0:15,0:15:41.99:0,42,365	0/0:22,0:22:59.98:0,60,521	0/0:21,0:21:56.97:0,57,491	0/0:19,0:19:47.98:0,48,417	1/1:0,15:15:39.11:431,39,0	0/0:24,0:24:50.96:0,51,440	0/0:41,0:42:99:0,104,881	0/0:13,0:13:32.99:0,33,286	0/0:26,0:26:56.97:0,57,495	0/0:24,0:24:56.96:0,57,493	0/0:14,0:14:38.99:0,39,339	0/0:31,0:32:77.01:0,77,657	0/0:26,0:26:68.98:0,69,599	0/0:26,0:26:74.77:0,75,634	0/0:10,0:10:29.99:0,30,260
chr10	97432594	.	GC	G	644.62	PASS	AB=0.817;AC=12;AF=0.214;AN=56;BaseQRankSum=10.752;DP=634;FS=11.000;HRun=2;HaplotypeScore=97.3530;InbreedingCoeff=0.7399;MQ=86.73;MQ0=0;MQRankSum=-8.762;QD=5.00;ReadPosRankSum=-0.506;VQSLOD=-0.6011;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,6:26:25.60:153,26,0	0/0:10,0:10:30.10:0,30,450	0/0:26,0:25:66.09:0,66,918	0/0:24,0:24:58.39:0,58,812	0/0:25,0:25:75.25:0,75,1121	0/0:20,0:20:60.19:0,60,879	0/0:20,0:20:60.18:0,60,877	0/0:33,0:33:99:0,99,1409	0/0:26,0:26:78.26:0,78,1169	0/0:21,0:21:60.20:0,60,897	0/0:15,0:15:42.14:0,42,627	0/0:25,0:25:72.24:0,72,1079	0/0:30,0:30:90.29:0,90,1324	0/0:31,0:31:93.30:0,93,1371	0/0:28,0:28:84.28:0,84,1258	0/0:27,0:27:81.27:0,81,1214	0/0:45,0:45:99:0,129,1926	1/1:5,6:11:5.29:100,5,0	1/1:16,3:19:11.79:79,12,0	1/1:8,5:13:0.49:97,0,0	0/1:17,1:18:2.94:76,0,3	0/0:22,0:22:66.22:0,66,986	0/0:18,0:18:54.17:0,54,789	0/0:38,0:38:99:0,114,1685	0/0:15,0:15:45.12:0,45,616	0/1:12,9:22:13.06:139,0,13	1/1:9,11:20:31.48:165,31,0	0/0:6,0:6:18.06:0,18,270
chr10	97432597	.	T	TGTGGGTGGGCAG	6968.64	PASS	AB=0.550;AC=13;AF=0.232;AN=56;BaseQRankSum=11.146;DP=566;FS=15.610;HRun=0;HaplotypeScore=196.5724;InbreedingCoeff=0.8815;MQ=91.91;MQ0=0;MQRankSum=-9.031;QD=129.05;ReadPosRankSum=0.043;VQSLOD=4.0107;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,5:9:23.24:996,23,0	0/0:10,0:10:30.10:0,30,1188	0/0:28,0:27:68.68:0,69,2156	0/0:24,0:24:47.23:0,47,1741	0/0:27,0:27:81.27:0,81,2937	0/0:21,0:21:63.22:0,63,2341	0/0:21,0:21:63.22:0,63,2359	0/0:34,0:34:99:0,102,3245	0/0:27,0:27:78.27:0,78,2978	0/0:20,0:20:60.20:0,60,2210	0/0:15,0:15:45.15:0,45,1708	0/0:26,0:26:78.27:0,78,2870	0/0:30,0:30:90.26:0,90,3236	0/0:31,0:31:93.29:0,93,3369	0/0:29,0:29:87.29:0,87,3248	0/0:29,0:29:81.28:0,81,3125	0/0:44,0:44:99:0,132,4970	1/1:2,6:8:20.56:1009,21,0	1/1:1,3:4:11.93:523,12,0	1/1:1,5:6:18.06:870,18,0	1/1:4,1:5:11.36:263,11,0	0/0:22,0:22:66.20:0,66,2275	0/0:17,0:17:51.18:0,51,1963	0/0:38,0:38:99:0,114,4158	0/0:13,0:13:39.13:0,39,1440	0/1:2,8:11:85.95:1479,0,86	1/1:0,11:11:33.11:1830,33,0	0/0:6,0:6:18.06:0,18,713
chr10	97433671	.	AG	A	372.47	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.276;DP=693;FS=1.091;HRun=2;HaplotypeScore=63.6394;InbreedingCoeff=0.9993;MQ=72.56;MQ0=0;MQRankSum=-2.194;QD=26.61;ReadPosRankSum=1.223;VQSLOD=3.3704;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1589	0/0:10,0:10:30.10:0,30,449	0/0:29,0:29:83.69:0,84,1097	0/0:19,0:18:44.98:0,45,572	0/0:20,0:20:60.18:0,60,858	0/0:32,0:32:96.33:0,96,1436	0/0:26,0:26:78.26:0,78,1149	0/0:33,0:33:96.31:0,96,1404	0/0:24,0:24:72.24:0,72,1076	0/0:23,0:23:69.19:0,69,974	0/0:26,0:26:78.24:0,78,1125	0/0:32,0:32:96.32:0,96,1433	0/0:22,0:22:66.21:0,66,967	0/0:28,0:28:84.28:0,84,1258	0/0:33,0:33:96.32:0,96,1416	0/0:27,0:27:81.26:0,81,1176	0/0:25,0:25:72.21:0,72,1015	1/1:0,14:14:36.12:467,36,0	0/0:19,0:19:57.18:0,57,834	0/0:24,0:24:69.22:0,69,1010	0/0:36,0:36:99:0,108,1578	0/0:21,0:21:63.20:0,63,922	0/0:18,0:18:54.18:0,54,793	0/0:20,0:20:60.19:0,60,876	0/0:16,0:16:42.13:0,42,607	0/0:31,0:31:93.30:0,93,1356	0/0:31,0:31:93.30:0,93,1364	0/0:16,0:16:48.16:0,48,719
chr10	97434268	.	CA	C	4520.73	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.712;DP=720;FS=1.632;HRun=2;HaplotypeScore=106.9030;InbreedingCoeff=0.9996;MQ=85.61;MQ0=0;MQRankSum=-15.117;QD=31.39;ReadPosRankSum=-0.628;VQSLOD=4.3268;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1841	0/0:16,0:16:48.15:0,48,700	0/0:31,0:31:93.25:0,93,1309	0/0:19,0:19:50.75:0,51,709	0/0:41,0:41:99:0,120,1799	0/0:31,0:31:93.28:0,93,1370	0/0:13,0:13:39.13:0,39,583	0/0:27,0:27:81.27:0,81,1197	0/0:23,0:23:69.23:0,69,1034	0/0:37,0:37:99:0,111,1633	0/0:20,0:20:60.16:0,60,874	0/0:29,0:29:84.28:0,84,1249	0/0:32,0:32:96.33:0,96,1438	0/0:23,0:23:69.23:0,69,1029	0/0:31,0:31:90.29:0,90,1329	0/0:27,0:27:78.26:0,78,1169	0/0:27,0:27:81.24:0,81,1172	1/1:2,17:19:44.85:583,45,0	1/1:1,21:22:57.16:710,57,0	1/1:0,26:26:72.23:933,72,0	1/1:0,27:27:45.15:583,45,0	0/0:22,0:22:66.22:0,66,988	0/0:32,0:32:96.27:0,96,1356	0/0:18,0:18:54.14:0,54,782	0/0:28,0:28:84.28:0,84,1259	1/1:2,27:29:39.29:1011,39,0	1/1:0,21:21:54.18:700,54,0	0/0:8,0:8:24.08:0,24,359
chr10	97434277	.	AGACG	A	6107.25	PASS	AB=0.528;AC=11;AF=0.196;AN=56;BaseQRankSum=16.216;DP=725;FS=5.217;HRun=0;HaplotypeScore=145.4698;InbreedingCoeff=0.9391;MQ=85.30;MQ0=0;MQRankSum=-15.424;QD=42.12;ReadPosRankSum=0.047;VQSLOD=5.1121;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,3267	0/0:16,0:16:48.15:0,48,1255	0/0:30,0:30:66.20:0,66,1766	0/0:20,0:20:51.77:0,52,1144	0/0:38,0:38:99:0,114,3003	0/0:33,0:33:96.33:0,96,2616	0/0:14,0:14:42.14:0,42,1116	0/0:31,0:31:90.30:0,90,2310	0/0:24,0:24:69.17:0,69,1731	0/0:37,0:37:93.32:0,93,2530	0/0:21,0:21:60.21:0,60,1632	0/0:28,0:28:81.28:0,81,2196	0/0:32,0:32:96.30:0,96,2490	0/0:24,0:24:72.23:0,72,1868	0/0:30,0:30:84.29:0,84,2252	0/0:25,0:25:72.23:0,72,1914	0/0:28,0:28:84.29:0,84,2267	1/1:3,15:18:42.11:740,42,0	1/1:1,15:16:42.14:812,42,0	1/1:2,26:28:66.17:1209,66,0	1/1:4,25:29:41.98:812,42,0	0/0:22,0:22:66.18:0,66,1690	0/0:28,0:28:81.28:0,81,2180	0/0:18,0:18:54.19:0,54,1458	0/0:31,0:31:87.30:0,87,2362	0/1:3,25:28:0.88:1414,0,1	1/1:2,24:26:60.19:1120,60,0	0/0:8,0:8:24.08:0,24,657
chr10	97435745	.	T	TAA	9382.16	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-4.618;DP=693;FS=0.673;HRun=0;HaplotypeScore=82.7186;InbreedingCoeff=0.9991;MQ=82.79;MQ0=0;MQRankSum=-1.818;QD=55.85;ReadPosRankSum=0.476;VQSLOD=5.0887;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:81.28:1646,81,0	0/0:7,0:7:21.07:0,21,339	0/0:16,0:16:48:0,48,653	0/0:24,0:24:60.20:0,60,961	0/0:32,0:32:96.33:0,96,1566	0/0:25,0:25:75.23:0,75,1176	0/0:20,0:20:60.19:0,60,955	0/0:32,0:32:96.32:0,96,1545	0/0:19,0:19:57.17:0,57,890	0/0:41,0:41:99:0,123,2005	0/0:24,0:24:72.23:0,72,1150	0/0:22,0:22:66.23:0,66,1077	0/0:29,0:29:87.26:0,87,1369	0/0:24,0:24:72.25:0,72,1175	0/0:26,0:26:72.25:0,72,1175	0/0:29,0:29:87.30:0,87,1419	0/0:29,0:29:84.29:0,84,1370	0/0:16,0:16:48.14:0,48,756	1/1:2,17:21:63.19:1187,63,0	1/1:0,21:21:63.18:1218,63,0	1/1:0,25:25:72.25:1463,72,0	0/0:23,0:23:69.24:0,69,1123	0/0:29,0:29:87.30:0,87,1412	0/0:18,0:17:54.14:0,54,852	0/0:28,0:28:81.28:0,81,1321	1/1:1,29:31:41.53:1637,42,0	1/1:3,38:41:99:2231,114,0	0/0:12,0:12:36.12:0,36,587
chr10	97435941	.	GT	G	624.87	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=6.089;DP=560;FS=0.701;HRun=8;HaplotypeScore=81.8326;InbreedingCoeff=0.6349;MQ=75.42;MQ0=0;MQRankSum=-2.009;QD=16.89;ReadPosRankSum=1.372;VQSLOD=3.7113;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:31:78:713,78,0	0/0:10,0:10:24.07:0,24,290	0/0:27,0:18:19.45:0,19,306	0/0:20,0:18:18.40:0,18,317	0/0:21,0:21:57.17:0,57,688	0/0:18,0:18:33.09:0,33,388	0/0:25,0:25:60.18:0,60,724	0/0:43,0:43:99:0,99,1153	0/0:10,0:10:24.07:0,24,290	0/0:28,0:28:78.23:0,78,928	0/0:28,0:28:78.18:0,78,890	0/0:13,0:13:33.10:0,33,399	0/0:22,0:22:63.19:0,63,751	0/0:7,0:7:15.05:0,15,181	0/0:12,0:12:33.10:0,33,398	0/0:17,0:17:42.13:0,42,507	0/0:21,0:21:60.15:0,60,697	0/0:12,0:12:28.90:0,29,330	0/0:24,0:23:58.29:0,58,557	0/0:30,0:30:80.77:0,81,712	0/0:22,0:22:51.08:0,51,505	0/0:9,0:9:21.06:0,21,252	0/0:21,0:21:42.13:0,42,501	0/0:14,0:14:39.12:0,39,471	0/0:27,0:27:61.78:0,62,804	0/0:18,0:18:51.06:0,51,506	0/0:24,0:23:53.62:0,54,450	0/1:6,0:6:16.88:17,0,96
chr10	97435950	.	GTTT	G	3657.82	PASS	AB=0.515;AC=11;AF=0.196;AN=56;BaseQRankSum=13.104;DP=548;FS=0.396;HRun=11;HaplotypeScore=92.0472;InbreedingCoeff=0.8878;MQ=69.49;MQ0=0;MQRankSum=-1.584;QD=26.51;ReadPosRankSum=4.158;VQSLOD=2.7484;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:29:51.70:273,52,0	0/0:11,0:11:33.09:0,33,586	0/0:27,0:17:21.24:0,21,421	0/0:17,0:13:14.59:0,15,115	0/0:22,0:24:63.20:0,63,1163	0/0:11,0:13:33.10:0,33,604	0/0:21,0:23:57.20:0,57,1123	0/0:36,0:37:99:0,99,1791	0/0:10,0:10:27.09:0,27,543	0/0:27,0:28:78.26:0,78,1508	0/0:24,0:25:66.20:0,66,1188	0/0:12,0:14:39.09:0,39,664	0/0:23,0:24:66.19:0,66,1231	0/0:10,0:10:27.02:0,27,437	0/0:12,0:12:30.10:0,30,590	0/0:17,0:17:39.11:0,39,749	0/0:20,0:21:57.17:0,57,1076	0/0:3,0:13:31.39:0,31,400	1/1:6,16:22:48.11:606,48,0	1/1:1,28:29:78.22:1003,78,0	1/1:3,16:19:39.10:510,39,0	0/0:13,0:13:39.09:0,39,533	0/0:21,0:21:63.20:0,63,1139	0/0:15,0:15:39.13:0,39,761	0/0:23,0:28:78.18:0,78,1276	0/1:1,16:17:9.49:560,0,9	1/1:1,21:22:54:706,54,0	0/0:6,0:6:12.04:0,12,213
chr10	97437483	.	ACC	A	838.12	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.274;DP=790;FS=8.743;HRun=3;HaplotypeScore=115.0422;InbreedingCoeff=0.9998;MQ=88.78;MQ0=0;MQRankSum=-0.414;QD=36.44;ReadPosRankSum=2.461;VQSLOD=2.8291;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,2491	0/0:13,0:13:36.09:0,36,627	0/0:26,0:26:60.01:0,60,1339	0/0:31,1:32:69.37:0,69,1428	0/0:19,0:19:54.19:0,54,1043	0/0:22,0:22:64.45:0,64,1180	0/0:31,0:31:93.32:0,93,1779	0/0:25,0:25:69.23:0,69,1286	0/0:27,0:27:75.25:0,75,1395	0/0:32,0:32:96.32:0,96,1819	0/0:19,0:19:57.20:0,57,1100	0/0:41,0:41:99:0,120,2287	0/0:29,0:29:87.28:0,87,1646	0/0:32,0:32:93.31:0,93,1757	0/0:39,0:39:99:0,117,2255	0/0:33,0:33:99:0,99,1845	0/0:39,0:39:99:0,117,2228	1/1:2,21:23:63.08:933,63,0	0/0:21,0:21:63.22:0,63,1197	0/0:18,0:18:54.16:0,54,979	0/0:51,0:51:99:0,153,2820	0/0:26,0:26:78.25:0,78,1456	0/0:25,0:25:75.25:0,75,1417	0/0:18,0:18:54.13:0,54,974	0/0:26,0:25:78.25:0,78,1442	0/0:32,0:32:93.32:0,93,1787	0/0:32,0:32:96.32:0,96,1811	0/0:14,0:14:42.14:0,42,809
chr10	97438336	.	AT	A	3641.73	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.638;DP=414;FS=2.462;HRun=7;HaplotypeScore=42.1683;InbreedingCoeff=0.9294;MQ=66.91;MQ0=0;MQRankSum=-1.226;QD=28.01;ReadPosRankSum=1.804;VQSLOD=4.1688;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:60.14:612,60,0	0/0:7,0:7:18.06:0,18,226	0/0:8,0:8:13.27:0,13,140	0/0:2,0:2:3.01:0,3,38	0/0:25,0:25:75.23:0,75,927	0/0:15,0:15:42.13:0,42,528	0/0:9,0:9:21.07:0,21,264	0/0:36,0:36:99:0,99,1222	0/0:8,0:8:21.07:0,21,264	0/0:20,0:20:48.13:0,48,572	0/0:19,0:19:54.13:0,54,649	0/0:12,0:12:33.11:0,33,415	0/0:10,0:10:30.08:0,30,363	0/0:8,0:8:24.08:0,24,302	0/0:12,0:12:33.09:0,33,402	0/0:9,0:9:21.07:0,21,264	0/0:26,0:26:78.25:0,78,980	1/1:2,22:24:66.15:673,66,0	1/1:1,16:17:48.11:490,48,0	1/1:0,13:13:36.08:367,36,0	1/1:0,5:5:15.03:153,15,0	0/0:2,0:2:6.02:0,6,75	0/0:11,0:11:33.11:0,33,415	0/0:3,0:3:9.03:0,9,113	0/0:30,0:30:84.26:0,84,1046	1/1:1,23:24:69.16:704,69,0	1/1:3,22:25:63.13:643,63,0	0/0:12,0:12:36.09:0,36,437
chr10	97439423	.	ATACC	A	3432.11	PASS	AB=0.839;AC=13;AF=0.232;AN=56;BaseQRankSum=8.432;DP=410;FS=4.442;HRun=0;HaplotypeScore=92.0049;InbreedingCoeff=0.6972;MQ=69.94;MQ0=1;MQRankSum=-6.335;QD=21.06;ReadPosRankSum=6.086;VQSLOD=2.9612;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:20.87:21,0,206	0/0:4,0:4:9.02:0,9,125	0/0:22,0:18:32.97:0,33,913	0/1:15,0:11:2.44:2,0,534	0/0:8,0:8:18.06:0,18,370	0/0:9,0:9:13.69:0,14,608	0/0:23,0:23:58.99:0,59,1166	0/0:11,0:10:21.07:0,21,457	0/0:14,0:14:42.03:0,42,777	0/0:12,0:12:33.08:0,33,512	0/0:11,0:12:27.53:0,28,381	0/0:11,0:11:18.42:0,18,456	0/0:11,0:12:36.10:0,36,720	0/0:12,0:12:33.11:0,33,757	0/0:20,0:20:60.17:0,60,1457	0/0:11,0:11:30.09:0,30,634	0/0:16,0:16:48.16:0,48,1117	1/1:4,6:10:16.27:274,16,0	1/1:8,13:21:41.73:658,42,0	1/1:2,18:20:27.26:453,27,0	1/1:2,14:16:24.55:380,25,0	0/0:7,0:7:14.88:0,15,243	0/0:6,0:6:9.50:0,10,224	0/0:18,0:18:51.13:0,51,1057	0/0:11,0:11:27.56:0,28,500	0/1:6,17:23:38.87:769,0,39	1/1:4,22:26:52.39:874,52,0	0/0:7,0:6:15.02:0,15,266
chr10	97439425	.	ACCCC	A	4115.11	PASS	AB=0.917;AC=13;AF=0.232;AN=56;BaseQRankSum=6.683;DP=409;FS=11.634;HRun=11;HaplotypeScore=89.3057;InbreedingCoeff=0.8337;MQ=69.95;MQ0=1;MQRankSum=-3.982;QD=28.58;ReadPosRankSum=7.081;VQSLOD=0.5573;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,25:31:54.15:834,54,0	0/0:3,0:4:3.01:0,3,38	0/0:23,0:18:30.07:0,30,543	0/0:16,0:11:24.08:0,24,452	0/0:11,0:10:18.06:0,18,354	0/0:10,0:10:27.09:0,27,621	0/0:19,0:25:54.13:0,54,988	0/0:8,0:9:15.05:0,15,338	0/0:12,0:13:39.12:0,39,812	0/0:7,0:12:29.97:0,30,397	0/0:6,0:12:23.88:0,24,272	0/0:11,0:12:21.07:0,21,451	0/0:11,0:12:33.10:0,33,607	0/0:11,0:13:36.12:0,36,800	0/0:19,0:20:56.86:0,57,1317	0/0:10,0:10:24.08:0,24,549	0/0:14,0:16:48.16:0,48,1032	1/1:10,0:10:18.01:279,18,0	1/1:20,0:20:39.07:604,39,0	1/1:19,0:19:27.07:414,27,0	1/1:16,0:16:24.55:373,25,0	0/0:7,0:7:11.96:0,12,189	0/0:6,0:6:9.03:0,9,212	0/0:19,0:21:54.16:0,54,1044	0/0:7,0:8:15.04:0,15,268	0/1:20,0:22:18.07:734,0,18	1/1:26,0:26:57:877,57,0	0/0:3,0:4:9.03:0,9,188
chr10	97439778	.	AAAAAAAT	A	3573.03	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.520;DP=556;FS=17.413;HRun=0;HaplotypeScore=131.2027;InbreedingCoeff=0.9616;MQ=67.58;MQ0=0;MQRankSum=-10.242;QD=39.70;ReadPosRankSum=0.153;VQSLOD=2.4085;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.29:0,84,2948	0/0:11,0:11:27.09:0,27,1013	0/0:12,0:11:15.52:0,16,554	0/0:17,0:15:30.07:0,30,845	0/0:20,0:20:48.16:0,48,1784	0/0:29,0:29:87.29:0,87,3167	0/0:21,0:21:42.14:0,42,1560	0/0:26,0:26:63.22:0,63,2292	0/0:15,0:15:39.13:0,39,1453	0/0:20,0:20:51.18:0,51,1796	0/0:23,0:23:54.18:0,54,1861	0/0:20,0:20:54.19:0,54,1958	0/0:23,0:23:45.14:0,45,1569	0/0:21,0:21:54.17:0,54,1923	0/0:22,0:22:57.20:0,57,2092	0/0:21,0:21:60.21:0,60,2137	0/0:32,0:32:84.29:0,84,3086	0/0:12,0:12:27.09:0,27,912	1/1:11,12:23:30.09:703,30,0	1/1:3,15:18:36:692,36,0	1/1:5,3:8:4.25:138,4,0	0/0:15,0:15:45.15:0,45,1663	0/0:20,0:20:54.19:0,54,1946	0/0:20,0:20:54.17:0,54,1910	0/0:23,0:23:42.14:0,42,1529	1/1:2,16:18:45.15:1056,45,0	1/1:6,17:23:42.13:984,42,0	0/0:11,0:11:27.09:0,27,1014
chr10	97442077	.	A	AGG	676.35	PASS	AB=0.938;AC=5;AF=0.089;AN=56;BaseQRankSum=7.283;DP=706;FS=4.204;HRun=2;HaplotypeScore=101.5158;InbreedingCoeff=0.7846;MQ=75.85;MQ0=0;MQRankSum=-6.660;QD=18.79;ReadPosRankSum=0.282;VQSLOD=1.3656;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,12:15:42.14:544,42,0	0/0:20,0:20:60.19:0,60,955	0/1:14,1:15:13.20:13,0,528	0/0:18,0:18:47.72:0,48,698	0/0:33,0:33:99:0,99,1532	0/0:16,0:16:45.12:0,45,682	0/0:27,0:27:78.27:0,78,1269	0/0:27,0:27:81.24:0,81,1228	0/0:25,0:25:69.24:0,69,1125	0/0:27,0:27:78.26:0,78,1250	0/0:15,0:15:42.14:0,42,685	0/0:22,0:22:66.21:0,66,1052	0/0:25,0:25:72.23:0,72,1141	0/0:39,0:39:99:0,117,1880	0/0:42,0:42:99:0,123,1967	0/0:31,0:31:93.30:0,93,1493	0/0:23,0:23:66.20:0,66,1041	1/1:1,5:6:18.06:246,18,0	0/0:17,0:17:51.14:0,51,797	0/0:27,0:27:78.21:0,78,1218	0/0:60,0:60:99:0,172,2694	0/0:28,0:28:78.25:0,78,1245	0/0:19,0:19:57.19:0,57,924	0/0:33,0:33:99:0,99,1573	0/0:23,0:23:69.21:0,69,1073	0/0:35,0:35:99:0,102,1595	0/0:26,0:26:78.25:0,78,1243	0/0:12,0:12:36.12:0,36,587
chr10	97442079	.	AT	A	252.48	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.224;DP=709;FS=3.161;HRun=1;HaplotypeScore=86.3686;InbreedingCoeff=0.9913;MQ=76.55;MQ0=0;MQRankSum=-6.428;QD=13.29;ReadPosRankSum=2.256;VQSLOD=2.9765;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,12:13:35.66:248,36,0	0/0:20,0:20:60.20:0,60,957	0/0:16,0:16:45.15:0,45,676	0/0:19,0:19:33.93:0,34,742	0/0:35,0:35:99:0,105,1605	0/0:14,0:14:42.13:0,42,647	0/0:28,0:28:84.26:0,84,1292	0/0:28,0:28:84.27:0,84,1303	0/0:25,0:25:75.26:0,75,1195	0/0:27,0:27:81.27:0,81,1275	0/0:15,0:15:45.15:0,45,719	0/0:22,0:22:66.23:0,66,1053	0/0:24,0:24:72.23:0,72,1123	0/0:38,0:38:99:0,114,1820	0/0:42,0:42:99:0,126,1960	0/0:33,0:33:99:0,99,1551	0/0:24,0:24:72.20:0,72,1089	1/1:1,5:6:14.97:123,15,0	0/0:21,0:21:60.20:0,60,921	0/0:27,0:27:81.28:0,81,1293	0/0:58,0:58:99:0,172,2689	0/0:28,0:28:84.26:0,84,1292	0/0:19,0:19:57.17:0,57,886	0/0:32,0:32:96.33:0,96,1520	0/0:22,0:22:66.23:0,66,1055	0/0:33,0:33:93.32:0,93,1479	0/0:28,0:28:84.29:0,84,1327	0/0:12,0:12:36.12:0,36,575
chr10	97442084	.	GT	G	272.46	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.229;DP=717;FS=1.979;HRun=1;HaplotypeScore=86.2377;InbreedingCoeff=0.9914;MQ=77.42;MQ0=0;MQRankSum=-6.423;QD=16.03;ReadPosRankSum=2.631;VQSLOD=4.0191;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:35.74:259,36,0	0/0:21,0:21:63.18:0,63,960	0/0:22,0:22:66.22:0,66,997	0/0:17,0:17:33.98:0,34,620	0/0:34,0:34:99:0,102,1627	0/0:15,0:15:45.14:0,45,692	0/0:29,0:29:87.27:0,87,1342	0/0:29,0:29:87.28:0,87,1349	0/0:23,0:23:69.24:0,69,1101	0/0:31,0:31:87.26:0,87,1327	0/0:15,0:15:45.15:0,45,720	0/0:22,0:22:66.20:0,66,1009	0/0:24,0:24:72.25:0,72,1148	0/0:41,0:41:99:0,123,1936	0/0:40,0:40:99:0,120,1895	0/0:32,0:32:96.33:0,96,1535	0/0:26,0:26:78.21:0,78,1185	1/1:0,5:5:15:132,15,0	0/0:22,0:22:66.22:0,66,1033	0/0:28,0:28:84.29:0,84,1340	0/0:57,0:57:99:0,169,2604	0/0:27,0:27:81.28:0,81,1293	0/0:20,0:20:57.19:0,57,897	0/0:30,0:30:90.31:0,90,1439	0/0:23,0:23:69.24:0,69,1099	0/0:32,0:32:93.32:0,93,1483	0/0:29,0:29:87.30:0,87,1391	0/0:11,0:11:33.11:0,33,527
chr10	97442087	.	T	TTGCC	1130.13	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.214;DP=719;FS=1.980;HRun=0;HaplotypeScore=131.0532;InbreedingCoeff=0.9914;MQ=79.12;MQ0=0;MQRankSum=-6.400;QD=62.79;ReadPosRankSum=2.628;VQSLOD=5.7731;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:13:36.12:878,36,0	0/0:21,0:21:63.22:0,63,1307	0/0:24,0:24:72.12:0,72,1303	0/0:20,0:20:39.32:0,39,913	0/0:33,0:33:96.32:0,96,1975	0/0:17,0:17:48.16:0,48,976	0/0:29,0:29:87.28:0,87,1762	0/0:26,0:26:78.26:0,78,1594	0/0:23,0:23:69.24:0,69,1446	0/0:31,0:31:93.29:0,93,1816	0/0:16,0:16:48.15:0,48,969	0/0:20,0:20:60.21:0,60,1258	0/0:26,0:26:75.21:0,75,1492	0/0:40,0:40:99:0,120,2461	0/0:40,0:40:99:0,117,2363	0/0:32,0:32:96.33:0,96,2007	0/0:27,0:27:81.24:0,81,1619	1/1:0,5:5:15.05:370,15,0	0/0:23,0:23:66.20:0,66,1318	0/0:28,0:28:81.26:0,81,1624	0/0:55,0:55:99:0,160,3333	0/0:27,0:27:81.25:0,81,1620	0/0:17,0:17:51.18:0,51,1069	0/0:30,0:30:90.31:0,90,1869	0/0:22,0:22:66.23:0,66,1384	0/0:32,0:32:93.32:0,93,1951	0/0:32,0:32:93.31:0,93,1894	0/0:10,0:10:30.10:0,30,603
chr10	97442089	.	T	TTGGC	2312.52	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.144;DP=729;FS=0.000;HRun=0;HaplotypeScore=137.9505;InbreedingCoeff=0.9917;MQ=78.69;MQ0=0;MQRankSum=-9.403;QD=64.24;ReadPosRankSum=0.957;VQSLOD=5.3449;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,12:29:75.26:1948,75,0	0/0:21,0:21:57.17:0,57,1087	0/0:26,0:26:69.20:0,69,1219	0/0:20,0:20:51.17:0,51,956	0/0:32,0:32:93.32:0,93,1857	0/0:18,0:18:51.17:0,51,1003	0/0:28,0:28:81.28:0,81,1605	0/0:25,0:25:72.24:0,72,1401	0/0:23,0:23:69.24:0,69,1356	0/0:30,0:30:84.29:0,84,1670	0/0:16,0:16:48.16:0,48,948	0/0:21,0:21:63.20:0,63,1206	0/0:26,0:26:72.25:0,72,1433	0/0:39,0:39:99:0,114,2277	0/0:38,0:38:99:0,108,2078	0/0:33,0:33:96.32:0,96,1879	0/0:26,0:26:78.25:0,78,1521	1/1:2,5:7:18.06:485,18,0	0/0:21,0:21:60.18:0,60,1136	0/0:26,0:26:78.25:0,78,1497	0/0:54,0:54:99:0,160,3100	0/0:28,0:28:84.27:0,84,1610	0/0:17,0:17:51.18:0,51,1018	0/0:29,0:29:87.28:0,87,1702	0/0:23,0:23:66.21:0,66,1267	0/0:31,0:31:93.32:0,93,1855	0/0:32,0:32:96.33:0,96,1888	0/0:10,0:10:18.06:0,18,360
chr10	97443065	.	AG	A	279.71	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.946;DP=640;FS=0.000;HRun=1;HaplotypeScore=63.3650;InbreedingCoeff=0.9971;MQ=90.28;MQ0=0;MQRankSum=-1.995;QD=27.97;ReadPosRankSum=0.320;VQSLOD=3.2950;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1729	0/0:9,0:9:27.09:0,27,432	0/0:31,0:31:93.26:0,93,1402	0/0:20,0:20:58.30:0,58,854	0/0:26,0:26:78.27:0,78,1247	0/0:30,0:30:90.29:0,90,1406	0/0:20,0:19:60.19:0,60,925	0/0:41,0:41:99:0,123,1948	0/0:15,0:15:45.12:0,45,692	0/0:25,0:25:75.26:0,75,1189	0/0:24,0:24:72.23:0,72,1128	0/0:22,0:22:63.21:0,63,997	0/0:16,0:16:48.16:0,48,767	0/0:22,0:22:66.23:0,66,1055	0/0:27,0:27:81.28:0,81,1293	0/0:30,0:30:90.31:0,90,1426	0/0:34,0:34:96.30:0,96,1509	1/1:0,10:10:27.09:374,27,0	0/0:23,0:23:69.23:0,69,1082	0/0:23,0:23:69.23:0,69,1091	0/0:12,0:12:36.12:0,36,576	0/0:27,0:27:75.21:0,75,1130	0/0:17,0:17:48.16:0,48,767	0/0:10,0:10:30.10:0,30,480	0/0:26,0:26:78.27:0,78,1247	0/0:26,0:26:75.24:0,75,1177	0/0:26,0:26:78.25:0,78,1223	0/0:11,0:11:33.11:0,33,528
chr10	97444046	.	TAC	T	431.57	PASS	AB=0.920;AC=15;AF=0.288;AN=52;BaseQRankSum=3.746;DP=492;FS=0.855;HRun=0;HaplotypeScore=67.7352;InbreedingCoeff=0.3414;MQ=65.73;MQ0=3;MQRankSum=2.074;QD=2.21;ReadPosRankSum=0.621;VQSLOD=1.3599;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:27:8.35:42,8,0	0/0:6,0:6:3.01:0,3,43	./.	./.	0/0:12,0:13:12.03:0,12,149	0/1:13,2:15:53.01:53,0,77	0/0:30,0:30:23.89:0,24,300	0/0:18,0:17:3.01:0,3,44	0/0:15,0:16:6.90:0,7,224	0/0:16,0:16:24.06:0,24,320	0/0:9,0:8:6:0,6,53	0/0:18,0:18:18.04:0,18,243	0/0:14,0:13:6.02:0,6,89	0/1:15,0:16:2.13:2,0,96	0/1:13,0:13:11.47:11,0,226	0/0:9,0:8:6.02:0,6,89	0/0:31,0:31:1.48:0,1,389	0/0:18,0:24:20.02:0,20,179	1/1:9,3:12:6.01:65,6,0	1/1:11,4:15:8.24:72,8,0	1/1:26,5:31:9.02:98,9,0	0/0:20,0:20:15.05:0,15,204	0/0:10,0:10:3.01:0,3,43	0/1:29,3:32:5.42:5,0,324	0/0:21,0:21:12.01:0,12,129	0/1:16,3:19:31.65:77,0,32	1/1:7,8:15:15.04:163,15,0	0/0:8,0:8:15.03:0,15,194
chr10	97444369	.	A	ATCT	1561.87	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.126;DP=771;FS=2.671;HRun=0;HaplotypeScore=111.0087;InbreedingCoeff=0.9996;MQ=93.78;MQ0=0;MQRankSum=-2.851;QD=60.07;ReadPosRankSum=0.698;VQSLOD=5.2283;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,2367	0/0:13,0:13:36.08:0,36,560	0/0:35,0:35:93.29:0,93,1467	0/0:33,0:33:84.26:0,84,1313	0/0:17,0:17:51.17:0,51,866	0/0:24,0:24:72.23:0,72,1193	0/0:29,0:29:87.28:0,87,1451	0/0:27,0:27:81.27:0,81,1357	0/0:26,0:26:75.26:0,75,1279	0/0:25,0:25:63.17:0,63,1020	0/0:14,0:14:42.14:0,42,716	0/0:34,0:34:99:0,102,1712	0/0:32,0:32:93.32:0,93,1585	0/0:36,0:36:99:0,105,1761	0/0:35,0:35:99:0,99,1674	0/0:29,0:29:87.28:0,87,1458	0/0:47,0:47:99:0,135,2270	1/1:2,24:26:72.25:1657,72,0	0/0:18,0:18:48.13:0,48,758	0/0:25,0:25:66.23:0,66,1126	0/0:43,0:43:99:0,117,1927	0/0:24,0:24:69.22:0,69,1150	0/0:15,0:15:45.15:0,45,758	0/0:31,0:31:84.28:0,84,1408	0/0:25,0:25:75.25:0,75,1240	0/0:22,0:22:66.21:0,66,1089	0/0:25,0:25:75.23:0,75,1244	0/0:11,0:11:33.05:0,33,479
chr10	97445840	.	A	AT	992.68	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.074;DP=768;FS=17.594;HRun=8;HaplotypeScore=77.2771;InbreedingCoeff=0.9991;MQ=71.28;MQ0=0;MQRankSum=-3.021;QD=27.57;ReadPosRankSum=1.997;VQSLOD=2.4089;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:90.02:0,90,817	0/0:16,0:16:42:0,42,379	0/0:18,0:18:42.01:0,42,381	0/0:22,0:20:44.61:0,45,375	0/0:38,0:38:99:0,105,956	0/0:30,0:30:75.04:0,75,686	0/0:24,0:24:66.03:0,66,604	0/0:40,0:40:89.68:0,90,803	0/0:22,0:22:60.03:0,60,549	0/0:32,0:32:87.04:0,87,796	0/0:28,0:28:81.04:0,81,741	0/0:30,0:30:87.04:0,87,796	0/0:31,0:31:90.05:0,90,824	0/0:21,0:21:57.02:0,57,517	0/0:35,0:35:96.02:0,96,873	0/0:14,0:14:33:0,33,302	0/0:34,0:34:96.04:0,96,878	1/1:1,34:36:96.12:1088,96,0	0/0:24,0:24:69.03:0,69,631	0/0:28,0:29:80.08:0,80,720	0/0:18,0:18:51.03:0,51,466	0/0:24,0:24:60.03:0,60,549	0/0:28,0:28:63.02:0,63,576	0/0:27,0:27:72.04:0,72,659	0/0:30,0:30:78.04:0,78,714	0/0:31,0:31:81.03:0,81,741	0/0:39,0:39:99:0,111,1002	0/0:10,0:10:30.02:0,30,275
chr10	97449280	.	A	AG	1484.98	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.222;DP=594;FS=1.119;HRun=5;HaplotypeScore=76.6460;InbreedingCoeff=0.9967;MQ=64.41;MQ0=11;MQRankSum=-0.593;QD=18.56;ReadPosRankSum=-1.976;VQSLOD=2.9917;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,99,1062	0/0:11,0:11:23.77:0,24,222	0/0:44,0:21:55.99:0,56,547	0/0:54,0:24:41.54:0,42,344	0/0:15,0:15:36.07:0,36,378	0/0:25,0:25:57.04:0,57,575	0/0:25,0:25:69.15:0,69,725	0/0:23,0:22:45.10:0,45,476	0/0:21,0:21:57.10:0,57,599	0/0:13,0:13:39.10:0,39,418	0/0:18,0:18:48.12:0,48,515	0/0:20,0:20:48.11:0,48,515	0/0:21,0:21:60.15:0,60,644	0/0:17,0:17:51.11:0,51,538	0/0:21,0:21:54.13:0,54,580	0/0:18,0:18:53.50:0,53,555	0/0:22,0:22:34.51:0,35,527	1/1:7,6:13:29.85:315,30,0	1/1:7,4:10:20.51:204,21,0	1/1:12,4:15:24.06:296,24,0	1/1:14,5:19:33.21:362,33,0	0/0:22,0:22:54.07:0,54,564	0/0:14,0:14:36.05:0,36,373	0/0:30,0:30:72.17:0,72,773	0/0:31,0:31:78.19:0,78,834	1/1:4,4:8:20.59:172,21,0	1/1:12,1:13:32.79:323,33,0	0/0:11,0:11:27.07:0,27,288
chr10	97449290	.	GGA	G	923.26	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=11.479;DP=611;FS=0.487;HRun=0;HaplotypeScore=87.5243;InbreedingCoeff=0.8745;MQ=64.98;MQ0=10;MQRankSum=-1.091;QD=10.04;ReadPosRankSum=-5.296;VQSLOD=2.1265;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,1903	0/0:10,0:10:13.10:0,13,320	0/0:36,0:17:18.71:0,19,475	0/0:38,1:19:23.07:0,23,343	0/0:16,0:16:48.12:0,48,800	0/0:19,0:19:51.14:0,51,850	0/0:25,0:25:75.24:0,75,1303	0/0:33,0:32:56.46:0,56,1121	0/0:28,0:28:81.22:0,81,1359	0/0:15,0:15:41.86:0,42,650	0/0:19,0:19:54.17:0,54,933	0/0:22,0:22:66.20:0,66,1112	0/0:21,0:21:63.20:0,63,1074	0/0:17,0:17:48.15:0,48,826	0/0:22,0:22:60.18:0,60,1047	0/0:18,0:18:51.15:0,51,834	0/0:22,0:22:66.20:0,66,1152	1/1:1,12:13:27.09:391,27,0	1/1:10,0:9:19.70:111,20,0	1/1:15,1:15:30.45:208,30,0	1/1:24,0:24:18.40:204,18,0	0/0:19,0:19:54.18:0,54,951	0/0:13,0:13:33.11:0,33,590	0/0:33,0:33:96.22:0,96,1582	0/0:32,0:32:90.30:0,90,1586	0/1:13,0:13:24.71:48,0,25	1/1:15,1:16:16.64:138,17,0	0/0:17,0:17:36.19:0,36,660
chr10	97449291	.	GA	G	2251.71	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.970;DP=621;FS=4.531;HRun=1;HaplotypeScore=74.6531;InbreedingCoeff=0.9861;MQ=65.84;MQ0=9;MQRankSum=-1.400;QD=23.70;ReadPosRankSum=-4.416;VQSLOD=2.3384;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,122,1578	0/0:9,0:9:12.88:0,13,248	0/0:35,1:17:10.82:0,11,396	0/0:40,0:20:26.70:0,27,286	0/0:16,0:16:48.11:0,48,646	0/0:20,0:20:54.13:0,54,713	0/0:26,0:26:78.23:0,78,1057	0/0:34,0:33:37.17:0,37,862	0/0:28,0:28:81.18:0,81,1066	0/0:15,0:15:41.86:0,42,527	0/0:18,0:18:54.17:0,54,747	0/0:22,0:22:66.18:0,66,888	0/0:23,0:23:63.18:0,63,855	0/0:17,0:17:48.14:0,48,662	0/0:21,0:21:60.18:0,60,837	0/0:17,0:17:51.12:0,51,664	0/0:22,0:22:66.20:0,66,918	1/1:12,1:13:27.03:308,27,0	1/1:6,6:11:30.01:327,30,0	1/1:12,4:16:38.38:358,38,0	1/1:15,9:24:56.52:582,57,0	0/0:20,0:20:54.17:0,54,763	0/0:13,0:13:33.11:0,33,468	0/0:36,0:36:99:0,102,1308	0/0:31,0:31:89.88:0,90,1235	1/1:6,7:13:35.67:348,36,0	1/1:13,4:17:48.04:516,48,0	0/0:18,0:18:35.90:0,36,501
chr10	97450240	.	AC	A	5218.43	PASS	AB=0.520;AC=11;AF=0.196;AN=56;BaseQRankSum=15.554;DP=500;FS=28.045;HRun=3;HaplotypeScore=85.2750;InbreedingCoeff=0.8754;MQ=81.41;MQ0=0;MQRankSum=-1.808;QD=32.62;ReadPosRankSum=0.421;VQSLOD=2.8029;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.23:0,72,1017	0/0:2,0:2:6.02:0,6,86	0/0:17,0:17:49.94:0,50,634	0/0:17,0:17:42.13:0,42,554	0/0:10,0:10:27.09:0,27,389	0/0:18,0:18:48.16:0,48,679	0/0:23,0:23:66.22:0,66,948	0/0:21,0:21:54.17:0,54,758	0/0:13,0:13:39.11:0,39,533	0/0:24,0:24:63.20:0,63,888	0/0:5,0:5:12.04:0,12,173	0/0:10,0:10:30.10:0,30,431	0/0:21,0:21:60.20:0,60,861	0/0:14,0:14:33.11:0,33,475	0/0:17,0:17:48.16:0,48,691	0/0:16,0:16:42.14:0,42,603	0/0:13,0:13:36.12:0,36,511	1/1:1,18:19:45.14:558,45,0	1/1:0,25:25:72.23:891,72,0	1/1:0,18:18:51.16:631,51,0	1/1:0,57:57:99:1858,150,0	0/0:9,0:9:21.07:0,21,302	0/0:10,0:10:27.09:0,27,386	0/0:22,0:22:60.20:0,60,864	0/0:15,0:15:36.10:0,36,494	0/1:2,24:26:7.87:797,0,8	1/1:0,15:15:39.12:483,39,0	0/0:15,0:15:45.15:0,45,648
chr10	97450436	.	CTCA	C	306.59	PASS	AB=0.899;AC=18;AF=0.474;AN=38;BaseQRankSum=-0.119;DP=175;FS=4.454;HRun=0;HaplotypeScore=32.1970;InbreedingCoeff=0.0819;MQ=21.59;MQ0=28;MQRankSum=-0.321;QD=3.52;ReadPosRankSum=-0.064;VQSLOD=0.9247;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:10:16.72:89,17,0	./.	0/0:25,0:4:8.99:0,9,75	./.	1/1:3,0:3:0.41:1,0,0	0/1:12,1:11:8.52:9,0,81	./.	0/1:9,1:6:18.82:61,0,19	1/1:3,1:3:5.95:69,6,0	0/1:4,1:5:16.99:17,0,18	0/1:7,1:8:16.82:53,0,17	./.	0/0:1,0:1:2.84:0,3,14	0/0:6,0:6:6.37:0,6,65	0/0:5,0:4:3.46:0,3,25	0/0:2,0:2:2.99:0,3,49	./.	./.	./.	0/0:3,0:2:1.55:0,2,4	1/1:9,2:9:14.45:85,14,0	0/1:8,0:5:10.96:11,0,12	1/1:4,0:4:2.13:5,2,0	./.	1/1:2,0:2:4.20:22,4,0	0/1:4,1:3:9.38:9,0,61	./.	0/0:3,0:1:2.60:0,3,10
chr10	97450451	.	CTCT	C	487.06	PASS	AB=0.882;AC=15;AF=0.326;AN=46;BaseQRankSum=2.739;DP=252;FS=0.000;HRun=0;HaplotypeScore=39.1974;InbreedingCoeff=-0.0986;MQ=21.34;MQ0=55;MQRankSum=1.061;QD=3.93;ReadPosRankSum=-0.746;VQSLOD=1.1274;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,2:15:7.73:8,0,66	./.	0/0:26,0:4:11.71:0,12,218	./.	0/0:4,0:4:2.13:0,2,5	0/0:19,0:13:20.78:0,21,214	./.	0/1:18,2:9:44.85:116,0,45	0/1:7,0:5:1.23:1,0,76	0/1:7,1:6:33.06:33,0,127	0/1:10,2:12:0.54:1,0,102	0/0:6,1:5:2.68:0,3,34	0/0:3,0:2:5.98:0,6,59	0/0:8,0:8:8.89:0,9,148	0/1:4,1:4:42.65:43,0,48	0/0:4,0:3:8.89:0,9,97	0/0:8,0:5:3.01:0,3,68	1/1:1,1:1:3.01:50,3,0	0/0:6,0:2:2.99:0,3,24	1/1:5,0:4:0.47:1,0,0	0/1:16,3:11:22.99:133,0,23	0/1:6,3:6:20:93,0,20	1/1:3,1:4:4.83:54,5,0	./.	0/0:4,0:4:8.79:0,9,82	0/1:10,1:6:56.65:79,0,57	./.	0/0:3,0:1:2.97:0,3,20
chr10	97450626	.	AGCCAGGTTCGGCACCAATGGG	A	5390.63	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.625;DP=563;FS=0.711;HRun=0;HaplotypeScore=299.3998;InbreedingCoeff=0.9735;MQ=84.34;MQ0=0;MQRankSum=-8.243;QD=77.01;ReadPosRankSum=2.712;VQSLOD=4.0795;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,11821	0/0:10,0:10:30.10:0,30,2693	0/0:16,0:16:42.12:0,42,1837	0/0:22,0:22:55.41:0,55,2751	0/0:13,0:13:36.12:0,36,3196	0/0:18,0:18:36.12:0,36,2801	0/0:33,0:33:96.33:0,96,8880	0/0:15,0:15:42.14:0,42,3260	0/0:15,0:15:39:0,39,3351	0/0:20,0:20:54.19:0,54,4525	0/0:12,0:12:27.01:0,27,2608	0/0:22,0:22:57.16:0,57,5285	0/0:17,0:17:51.18:0,51,5034	0/0:21,0:20:54.19:0,54,4270	0/0:23,0:23:63.22:0,63,6037	0/0:23,0:22:66.23:0,66,6125	0/0:45,0:45:99:0,129,11472	1/1:4,7:11:18.06:964,18,0	1/1:2,4:6:12.04:699,12,0	1/1:3,9:12:21.07:1122,21,0	1/1:9,7:16:9.03:424,9,0	0/0:25,0:25:72.25:0,72,6244	0/0:17,0:17:51.18:0,51,4435	0/0:49,0:49:99:0,141,12603	0/0:24,0:24:72.23:0,72,5923	1/1:6,8:14:24.08:1308,24,0	1/1:3,8:11:15.05:874,15,0	0/0:8,0:8:18.04:0,18,1489
chr10	97450768	.	C	CG	5766.39	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.181;DP=684;FS=0.767;HRun=0;HaplotypeScore=72.5596;InbreedingCoeff=0.9998;MQ=82.57;MQ0=0;MQRankSum=-3.858;QD=43.03;ReadPosRankSum=-0.309;VQSLOD=5.1034;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1552	0/0:11,0:11:30.10:0,30,420	0/0:19,0:19:57.19:0,57,793	0/0:21,0:21:63.21:0,63,874	0/0:15,0:15:45.15:0,45,621	0/0:17,0:17:51.17:0,51,707	0/0:30,0:30:90.28:0,90,1238	0/0:25,0:25:75.24:0,75,1020	0/0:37,0:37:99:0,108,1510	0/0:26,0:26:75.25:0,75,1049	0/0:19,0:19:54.18:0,54,747	0/0:32,0:32:93.30:0,93,1283	0/0:30,0:30:90.30:0,90,1259	0/0:27,0:27:81.27:0,81,1132	0/0:33,0:33:99:0,99,1383	0/0:37,0:37:99:0,108,1494	0/0:27,0:27:75.23:0,75,1031	1/1:1,25:26:72.24:1132,72,0	1/1:0,17:17:51.15:763,51,0	1/1:2,16:18:48.16:766,48,0	1/1:1,33:34:84.29:1341,84,0	0/0:21,0:21:54.17:0,54,738	0/0:12,0:12:33.11:0,33,461	0/0:39,0:39:99:0,111,1552	0/0:24,0:23:69.23:0,69,959	1/1:1,23:24:69.24:1097,69,0	1/1:1,14:15:42.14:668,42,0	0/0:11,0:11:33.11:0,33,456
chr10	97451698	.	T	TC	2121.78	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=12.039;DP=231;FS=1.752;HRun=0;HaplotypeScore=123.2194;InbreedingCoeff=0.7851;MQ=52.78;MQ0=2;MQRankSum=-11.836;QD=26.52;ReadPosRankSum=4.286;VQSLOD=4.1256;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:11.09:0,11,234	0/0:2,0:2:6.02:0,6,83	0/0:1,0:1:3.01:0,3,42	0/0:3,0:2:5.99:0,6,64	0/0:9,0:9:27.09:0,27,374	0/0:11,0:11:30.10:0,30,413	0/0:4,0:4:12.04:0,12,168	0/0:27,0:25:74.74:0,75,1015	0/0:2,0:2:6.02:0,6,82	0/0:2,0:2:6.02:0,6,84	0/0:5,0:5:15.05:0,15,203	0/0:1,0:4:5.99:0,6,63	0/0:4,0:4:12.01:0,12,134	./.	0/0:6,0:6:12.04:0,12,164	0/0:4,0:4:11.39:0,11,118	0/0:21,0:21:45.15:0,45,614	1/1:8,5:13:37.80:366,38,0	1/1:6,2:8:23.97:209,24,0	1/1:11,5:19:56.78:558,57,0	1/1:3,1:4:11.99:111,12,0	./.	0/0:3,0:3:8.51:0,9,84	0/0:1,0:1:3.01:0,3,42	0/0:14,0:13:33.11:0,33,449	1/1:11,4:15:44.96:423,45,0	1/1:13,7:21:63:631,63,0	0/0:21,0:21:45.15:0,45,612
chr10	97451699	.	ATTAT	A	1148.20	PASS	AB=1.000;AC=25;AF=0.625;AN=40;BaseQRankSum=-7.445;DP=234;FS=0.000;HRun=0;HaplotypeScore=147.1162;InbreedingCoeff=0.6741;MQ=49.53;MQ0=2;MQRankSum=6.549;QD=8.83;ReadPosRankSum=0.650;VQSLOD=2.5627;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:7:8.97:0,9,104	./.	./.	./.	1/1:6,3:9:5.98:66,6,0	1/1:7,4:11:9.03:139,9,0	1/1:4,0:4:3.01:44,3,0	0/1:27,0:25:0:0,0,0	1/1:1,1:2:3.01:46,3,0	./.	1/1:3,2:5:6.02:80,6,0	1/1:4,0:4:6.01:73,6,0	./.	./.	1/1:2,4:6:6.02:92,6,0	1/1:3,0:3:3.01:45,3,0	1/1:9,12:21:21.07:323,21,0	0/0:11,0:13:8.81:0,9,60	0/0:8,0:8:17.97:0,18,154	0/0:19,0:19:34.92:0,35,260	0/0:4,0:4:5.47:0,5,25	./.	1/1:3,0:3:3.01:30,3,0	./.	1/1:5,9:13:18.06:277,18,0	0/0:20,0:20:44.40:0,44,323	0/0:23,0:23:35.36:0,35,248	1/1:14,0:21:9.01:84,9,0
chr10	97451701	.	T	TC	2623.29	PASS	AB=1.000;AC=13;AF=0.250;AN=52;BaseQRankSum=12.015;DP=227;FS=0.525;HRun=0;HaplotypeScore=128.9179;InbreedingCoeff=0.6713;MQ=49.57;MQ0=2;MQRankSum=-11.314;QD=29.48;ReadPosRankSum=4.513;VQSLOD=3.4837;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:8.50:0,9,157	0/0:1,0:1:3.01:0,3,42	0/0:1,0:1:3.01:0,3,42	0/0:2,0:1:3.01:0,3,42	0/0:9,0:9:27.02:0,27,335	0/0:11,0:11:29.94:0,30,350	0/0:3,0:3:9.02:0,9,113	0/0:27,0:25:75.24:0,75,1031	0/0:2,0:2:5.97:0,6,61	0/0:2,0:2:6.02:0,6,84	0/0:5,0:5:14.95:0,15,165	0/0:4,0:4:5.95:0,6,59	0/0:2,0:2:6.02:0,6,84	./.	0/0:6,0:6:11.93:0,12,122	0/0:3,0:3:8.92:0,9,100	0/0:20,0:20:44.77:0,45,467	1/1:7,6:13:35.76:370,36,0	1/1:2,6:8:23.62:298,24,0	1/1:8,11:19:56.76:648,57,0	1/1:1,3:4:12:136,12,0	./.	0/1:2,0:2:10.31:10,0,19	0/0:1,0:1:3.01:0,3,42	0/0:14,0:13:32.79:0,33,323	1/1:9,11:20:17.61:574,18,0	1/1:11,12:23:68.70:760,69,0	0/0:19,0:19:44.95:0,45,559
chr10	97452091	.	T	TAATAC	4902.14	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.232;DP=637;FS=10.294;HRun=0;HaplotypeScore=139.2425;InbreedingCoeff=0.9745;MQ=90.05;MQ0=0;MQRankSum=-12.221;QD=74.27;ReadPosRankSum=1.781;VQSLOD=6.5805;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:64:99:0,189,4338	0/0:7,0:7:18.06:0,18,420	0/0:29,0:29:56.66:0,57,1762	0/0:22,0:22:57.17:0,57,1134	0/0:19,0:19:57.20:0,57,1319	0/0:32,0:32:93.32:0,93,2146	0/0:34,0:34:99:0,102,2302	0/0:30,0:30:90.27:0,90,1928	0/0:31,0:31:93.31:0,93,2097	0/0:21,0:21:63.22:0,63,1449	0/0:14,0:14:42.14:0,42,979	0/0:29,0:29:87.30:0,87,2027	0/0:33,0:33:93.32:0,93,2153	0/0:36,0:36:99:0,102,2262	0/0:27,0:27:75.26:0,75,1748	0/0:15,0:15:45.15:0,45,1049	0/0:43,0:43:99:0,129,2913	1/1:1,9:10:29.59:754,30,0	1/1:2,4:6:18.06:425,18,0	1/1:2,6:8:21.68:496,22,0	1/1:0,8:8:23.95:463,24,0	0/0:22,0:22:63.18:0,63,1316	0/0:19,0:19:54.19:0,54,1228	0/0:29,0:29:87.26:0,87,1886	0/0:13,0:13:39.13:0,39,885	1/1:0,17:17:51.18:1392,51,0	1/1:0,17:17:51.18:1371,51,0	0/0:2,0:2:6.02:0,6,129
chr10	97452092	.	G	GCA	2349.96	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.972;DP=640;FS=6.422;HRun=0;HaplotypeScore=108.1844;InbreedingCoeff=0.9675;MQ=88.87;MQ0=0;MQRankSum=-11.489;QD=34.06;ReadPosRankSum=3.163;VQSLOD=6.2165;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:64:99:0,182,3063	0/0:6,0:6:18.06:0,18,294	0/0:28,0:28:79.64:0,80,1284	0/0:21,0:21:53.91:0,54,791	0/0:19,0:19:57.19:0,57,930	0/0:32,0:32:96.30:0,96,1519	0/0:34,0:34:99:0,102,1635	0/0:32,0:32:84.28:0,84,1342	0/0:31,0:31:93.32:0,93,1514	0/0:22,0:22:63.22:0,63,1026	0/0:14,0:14:42.14:0,42,685	0/0:29,0:29:87.30:0,87,1415	0/0:33,0:33:99:0,99,1552	0/0:36,0:36:99:0,102,1604	0/0:28,0:28:81.25:0,81,1275	0/0:15,0:15:45.15:0,45,734	0/0:41,0:41:99:0,123,2003	1/1:2,9:11:30.10:432,30,0	1/1:2,4:6:11.86:168,12,0	1/1:2,6:8:24.07:324,24,0	1/1:1,8:9:15.52:213,16,0	0/0:23,0:23:66.21:0,66,1027	0/0:19,0:19:57.16:0,57,880	0/0:29,0:29:84.29:0,84,1366	0/0:13,0:13:39.13:0,39,636	1/1:1,17:18:51.17:717,51,0	1/1:0,17:17:51.17:680,51,0	0/0:2,0:2:6.02:0,6,88
chr10	97453605	.	GT	G	4174.68	PASS	AB=0.596;AC=13;AF=0.232;AN=56;BaseQRankSum=10.889;DP=598;FS=5.475;HRun=8;HaplotypeScore=61.4054;InbreedingCoeff=0.9068;MQ=81.27;MQ0=0;MQRankSum=-3.011;QD=23.45;ReadPosRankSum=2.976;VQSLOD=4.4300;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:33:81.13:782,81,0	0/0:8,0:8:15:0,15,154	0/0:19,0:19:46.87:0,47,508	0/0:15,0:15:30.02:0,30,326	0/0:23,0:24:63.06:0,63,737	0/0:21,0:21:59.67:0,60,697	0/0:19,0:19:54.15:0,54,641	0/0:31,0:32:63.06:0,63,739	0/0:12,0:12:36.09:0,36,412	0/0:27,0:27:69.20:0,69,823	0/0:15,0:15:42.12:0,42,498	0/0:22,0:22:66.20:0,66,797	0/0:26,0:26:72.22:0,72,869	0/0:23,0:23:66.20:0,66,785	0/0:27,0:27:78.24:0,78,937	0/0:18,0:18:45.14:0,45,544	0/0:25,0:25:69.18:0,69,808	1/1:3,25:28:32.88:601,33,0	1/1:2,20:22:57.09:550,57,0	1/1:1,25:26:72.05:683,72,0	1/1:2,19:21:57.09:550,57,0	0/0:15,0:15:42.13:0,42,507	0/0:17,0:17:42.13:0,42,507	0/0:19,0:20:51.02:0,51,594	0/0:27,0:28:78.09:0,78,909	0/1:9,19:28:9.39:487,0,9	1/1:2,18:20:54.08:521,54,0	0/0:7,0:7:21.05:0,21,241
chr10	97454354	.	T	TTTCC	1217	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=5.752;DP=502;FS=4.857;HRun=0;HaplotypeScore=70.4302;InbreedingCoeff=0.2792;MQ=56.14;MQ0=5;MQRankSum=2.120;QD=11.82;ReadPosRankSum=2.093;VQSLOD=2.0183;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,15:24:14.98:313,15,0	0/0:5,0:5:9.03:0,9,149	0/0:34,0:9:8.99:0,9,133	0/0:50,0:16:8.09:0,8,92	0/0:16,0:16:42.11:0,42,667	0/0:14,0:13:30.08:0,30,449	0/0:23,0:23:42.03:0,42,513	0/0:28,0:27:53.94:0,54,592	0/0:17,0:17:42.09:0,42,595	0/0:10,0:10:15.05:0,15,249	0/0:5,0:5:15.05:0,15,246	0/0:18,0:18:42.10:0,42,600	0/0:21,0:21:45.12:0,45,667	0/0:17,0:17:33.09:0,33,498	0/0:16,0:16:36.09:0,36,516	0/0:18,0:18:39.08:0,39,546	0/0:27,0:27:66.66:0,67,1014	0/1:9,0:9:39.94:41,0,40	0/1:11,0:9:32.49:32,0,85	1/1:5,0:4:8.94:90,9,0	0/1:23,0:23:28.90:228,0,29	0/0:14,0:14:39.11:0,39,596	0/0:7,0:7:15.04:0,15,224	0/0:23,0:23:25.04:0,25,614	0/0:12,0:13:30.10:0,30,469	0/1:20,0:20:55.48:473,0,55	0/1:11,0:11:31.91:186,0,32	0/0:23,0:23:66.13:0,66,918
chr10	97454371	.	T	TTCCC	1978.63	PASS	AB=0.794;AC=12;AF=0.214;AN=56;BaseQRankSum=-7.627;DP=448;FS=0.890;HRun=0;HaplotypeScore=66.7064;InbreedingCoeff=0.7258;MQ=60.23;MQ0=4;MQRankSum=2.413;QD=21.28;ReadPosRankSum=0.589;VQSLOD=3.3234;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:24.93:175,0,25	0/0:4,0:4:12.02:0,12,174	0/0:24,0:11:21:0,21,217	0/0:24,0:13:11.39:0,11,134	0/0:20,0:20:54.12:0,54,791	0/0:15,0:14:36.09:0,36,534	0/0:18,0:18:36.07:0,36,507	0/0:22,0:22:30.05:0,30,442	0/0:18,0:18:36.10:0,36,561	0/0:9,0:9:27.06:0,27,364	0/0:7,0:7:21.05:0,21,311	0/0:17,0:17:42.10:0,42,632	0/0:18,0:18:42.08:0,42,656	0/0:13,0:13:30.09:0,30,487	0/0:18,0:18:42.08:0,42,591	0/0:16,0:16:36.11:0,36,568	0/0:28,0:28:72.13:0,72,1116	1/1:3,8:11:1:72,1,0	1/1:7,3:11:15.01:185,15,0	1/1:1,4:4:11.97:169,12,0	1/1:4,10:15:14.01:376,14,0	0/0:17,0:17:47.80:0,48,705	0/0:7,0:7:18.04:0,18,257	0/0:23,0:23:36.10:0,36,571	0/0:13,0:13:33.09:0,33,497	0/1:6,13:20:4.99:878,0,5	1/1:3,7:10:12.04:290,12,0	0/0:24,0:24:57.17:0,57,937
chr10	97454989	.	A	AT	1288.08	PASS	AB=0.892;AC=16;AF=0.286;AN=56;BaseQRankSum=1.420;DP=489;FS=10.930;HRun=14;HaplotypeScore=74.7089;InbreedingCoeff=0.4368;MQ=65.42;MQ0=16;MQRankSum=-3.420;QD=6.19;ReadPosRankSum=-1.958;VQSLOD=1.0805;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,2:32:13.15:0,13,316	0/0:5,0:5:5.87:0,6,38	0/1:20,1:11:21.04:26,0,21	0/1:21,0:10:2.80:3,0,14	0/0:8,0:9:14.33:0,14,95	0/1:10,1:11:1.70:2,0,102	0/0:10,0:11:22.69:0,23,139	0/1:21,6:29:42.95:141,0,43	0/0:10,0:10:20.67:0,21,135	0/0:24,0:25:19.93:0,20,248	0/0:7,0:7:14.74:0,15,95	0/0:11,0:13:21.78:0,22,127	0/0:19,1:22:26.80:0,27,194	0/1:9,1:10:11.57:12,0,60	0/0:18,0:18:37.48:0,37,236	0/0:12,0:14:21.75:0,22,127	0/0:33,0:34:38.46:0,38,324	0/1:10,2:13:54.84:55,0,70	1/1:8,13:20:3.71:265,4,0	1/1:6,12:19:35.05:317,35,0	1/1:5,4:9:11.95:98,12,0	0/0:6,0:6:8.80:0,9,58	0/0:14,0:13:25.58:0,26,159	0/0:12,0:11:26.58:0,27,173	0/0:22,0:22:37.17:0,37,235	0/0:18,0:19:31.50:0,32,198	1/1:13,13:28:6.29:275,6,0	1/1:9,10:21:15.57:267,16,0
chr10	97455316	.	C	CAAA	520.81	PASS	AB=0.875;AC=3;AF=0.054;AN=56;BaseQRankSum=-0.667;DP=407;FS=0.987;HRun=10;HaplotypeScore=63.6820;InbreedingCoeff=0.5349;MQ=74.94;MQ0=0;MQRankSum=-0.988;QD=20.83;ReadPosRankSum=-1.651;VQSLOD=1.2136;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,12:18:33.11:613,33,0	0/0:2,0:2:2.98:0,3,36	0/0:11,0:11:2.06:0,2,88	0/1:5,0:7:9.14:9,0,12	0/0:14,0:15:39.04:0,39,455	0/0:16,0:17:42.04:0,42,492	0/0:19,0:19:22.31:0,22,510	0/0:17,0:18:40.43:0,40,508	0/0:8,0:8:21.04:0,21,255	0/0:14,0:14:39.11:0,39,474	0/0:13,0:14:30.01:0,30,346	0/0:12,0:12:33.07:0,33,401	0/0:18,0:19:52.49:0,52,653	0/0:9,0:9:21:0,21,227	0/0:14,0:15:38.55:0,39,455	0/0:13,0:13:36.11:0,36,438	0/0:26,0:26:52.45:0,52,886	0/0:23,0:22:63.17:0,63,754	0/0:9,0:9:27.05:0,27,313	0/0:24,0:24:63.15:0,63,766	0/0:15,0:15:30.01:0,30,365	0/0:17,0:18:37.44:0,37,447	0/0:15,0:15:39.10:0,39,474	0/0:7,0:7:18.04:0,18,219	0/0:10,0:11:25.43:0,25,326	0/0:20,0:21:54.07:0,54,638	0/0:16,0:16:42.10:0,42,511	0/0:11,0:11:27.95:0,28,331
chr10	97455805	.	AT	A	897.23	PASS	AB=0.944;AC=5;AF=0.089;AN=56;BaseQRankSum=8.089;DP=600;FS=1.878;HRun=10;HaplotypeScore=64.6416;InbreedingCoeff=0.4467;MQ=73.25;MQ0=0;MQRankSum=-0.488;QD=11.96;ReadPosRankSum=1.979;VQSLOD=3.3484;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,40:42:99:989,114,0	0/1:8,1:9:8.01:8,0,148	0/1:13,1:14:1.22:1,0,173	0/1:10,0:10:2.30:2,0,122	0/0:32,0:32:81.19:0,81,872	0/0:21,1:22:35.34:0,35,600	0/0:19,0:19:16.09:0,16,405	0/0:28,1:29:34.11:0,34,605	0/0:9,0:9:24.06:0,24,266	0/0:18,0:18:44.79:0,45,476	0/0:22,1:23:37.11:0,37,631	0/0:11,0:12:29.91:0,30,313	0/0:20,0:20:48.11:0,48,518	0/0:27,1:28:46.13:0,46,720	0/0:20,0:22:43.12:0,43,508	0/0:14,0:14:36.08:0,36,388	0/0:36,0:36:90.23:0,90,987	0/0:26,0:28:68.98:0,69,723	0/0:15,0:15:35.86:0,36,360	0/0:21,0:21:51.11:0,51,542	0/0:10,0:10:24.05:0,24,257	0/0:25,0:26:75.02:0,75,803	0/0:25,0:25:57.15:0,57,623	0/0:14,0:15:38.94:0,39,412	0/0:21,0:21:54.14:0,54,590	0/0:33,0:34:78.04:0,78,844	0/0:37,0:38:99:0,102,1109	0/0:8,0:8:21.06:0,21,232
chr10	97457545	.	T	TACAA	9209.97	PASS	AB=0.952;AC=13;AF=0.232;AN=56;BaseQRankSum=9.619;DP=735;FS=2.569;HRun=0;HaplotypeScore=135.7546;InbreedingCoeff=0.9396;MQ=79.85;MQ0=0;MQRankSum=-12.267;QD=52.33;ReadPosRankSum=-3.074;VQSLOD=4.6926;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,2105	0/0:10,0:10:24.05:0,24,393	0/1:19,0:20:1.32:1,0,606	0/0:19,0:19:42.07:0,42,674	0/0:24,0:24:54.18:0,54,958	0/0:25,0:25:72.23:0,72,1248	0/0:37,0:37:99:0,105,1845	0/0:39,0:39:90.30:0,90,1578	0/0:32,0:32:81.21:0,81,1316	0/0:35,0:35:93.31:0,93,1629	0/0:25,0:25:69.24:0,69,1240	0/0:28,0:28:78.25:0,78,1363	0/0:29,0:29:75.26:0,75,1338	0/0:27,0:27:81.26:0,81,1423	0/0:27,0:27:75.26:0,75,1344	0/0:20,0:20:57.20:0,57,1025	0/0:24,0:24:66.23:0,66,1181	1/1:4,21:24:54.09:1286,54,0	1/1:6,15:21:48.13:1068,48,0	1/1:5,29:34:93.32:2374,93,0	1/1:8,4:12:21.03:484,21,0	0/0:29,0:29:78.23:0,78,1309	0/0:33,0:33:96.33:0,96,1719	0/0:29,0:29:78.27:0,78,1391	0/0:14,0:14:39.13:0,39,695	1/1:14,18:32:33.31:1886,33,0	1/1:12,20:32:87.30:2110,87,0	0/0:10,0:10:30.10:0,30,533
chr10	97457561	.	C	CA	3432.29	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.474;DP=710;FS=3.665;HRun=6;HaplotypeScore=101.7779;InbreedingCoeff=0.9980;MQ=77.89;MQ0=0;MQRankSum=-12.491;QD=29.85;ReadPosRankSum=0.494;VQSLOD=3.5952;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1221	0/0:10,0:10:24.05:0,24,245	0/0:18,0:18:33.02:0,33,320	0/0:17,0:17:26.99:0,27,255	0/0:23,0:23:69.12:0,69,689	0/0:24,0:24:69.15:0,69,704	0/0:39,0:39:96.16:0,96,962	0/0:38,0:38:99:0,105,1060	0/0:24,0:24:63.14:0,63,643	0/0:31,0:31:78.17:0,78,795	0/0:24,0:24:66.15:0,66,673	0/0:31,0:31:84.17:0,84,850	0/0:26,0:26:69.13:0,69,696	0/0:27,0:27:75.17:0,75,765	0/0:32,0:32:87.18:0,87,881	0/0:22,0:22:60.12:0,60,605	0/0:22,0:22:57.07:0,57,565	0/0:23,0:22:63.14:0,63,643	1/1:4,9:13:27.09:339,27,0	1/1:3,32:35:96.19:1154,96,0	1/1:3,10:13:24.03:284,24,0	0/0:28,0:28:78.15:0,78,782	0/0:38,0:38:99:0,108,1095	0/0:32,0:32:90.15:0,90,902	0/0:16,0:16:39.08:0,39,398	1/1:4,23:27:44.61:863,45,0	1/1:5,22:27:63.20:791,63,0	0/0:8,0:8:24.05:0,24,244
chr10	97461787	.	CAA	C	1234.70	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=7.385;DP=490;FS=1.816;HRun=4;HaplotypeScore=74.7550;InbreedingCoeff=0.8306;MQ=65.66;MQ0=9;MQRankSum=0.113;QD=10.74;ReadPosRankSum=1.613;VQSLOD=-0.0774;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:83.12:321,0,83	0/0:5,0:5:15.02:0,15,190	0/0:30,0:22:60.10:0,60,669	0/0:36,0:19:24.09:0,24,386	0/0:11,0:11:25.98:0,26,206	0/0:18,0:18:46.29:0,46,545	0/0:17,0:17:42.12:0,42,443	0/0:21,0:20:57:0,57,521	0/0:17,0:17:46.83:0,47,405	0/0:12,0:12:36.05:0,36,472	0/0:12,0:12:32.83:0,33,337	0/0:8,0:8:23.93:0,24,206	0/0:13,0:13:38.93:0,39,360	0/0:19,0:19:54.80:0,55,611	0/0:22,0:22:60.43:0,60,769	0/0:10,0:10:30.04:0,30,331	0/0:31,0:31:80.52:0,81,911	1/1:25,0:25:17.98:152,18,0	1/1:6,6:12:35.88:290,36,0	1/1:12,0:12:11.99:101,12,0	0/0:20,0:19:0:0,0,0	0/0:18,0:18:54.07:0,54,579	0/0:11,0:11:23.33:0,23,218	0/0:29,0:29:66.86:0,67,696	0/0:12,0:12:34.61:0,35,393	1/1:19,0:19:50.85:406,51,0	1/1:19,0:19:17.63:138,18,0	0/0:3,0:3:8.18:0,8,51
chr10	97461788	.	AAAACACACACAC	A	2458.48	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=8.249;DP=499;FS=0.557;HRun=0;HaplotypeScore=156.5341;InbreedingCoeff=0.8717;MQ=63.17;MQ0=10;MQRankSum=0.308;QD=21.57;ReadPosRankSum=0.710;VQSLOD=2.9355;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:99:128,0,2357	0/0:5,0:5:15.04:0,15,723	0/0:29,0:21:60.10:0,60,669	0/0:35,0:18:24.09:0,24,386	0/0:10,0:10:26.95:0,27,286	0/0:17,0:17:51.10:0,51,1954	0/0:17,0:17:47.27:0,47,1114	0/0:23,0:21:63.07:0,63,1034	0/0:16,0:16:48.05:0,48,921	0/0:14,0:14:42.08:0,42,1688	0/0:14,0:14:32.85:0,33,802	0/0:8,0:8:23.95:0,24,498	0/0:15,0:15:44.34:0,44,907	0/0:20,0:20:58.02:0,58,2101	0/0:23,0:23:69.15:0,69,2269	0/0:10,0:10:30.05:0,30,703	0/0:32,0:32:90.06:0,90,2965	1/1:2,0:23:18.04:501,18,0	1/1:12,0:12:35.88:290,36,0	1/1:0,9:11:18.06:521,18,0	./.	0/0:20,0:20:57.13:0,57,1696	0/0:10,0:10:23.35:0,23,875	0/0:29,0:29:66.75:0,67,1872	0/0:12,0:12:34.33:0,34,1283	1/1:0,19:19:50.37:630,50,0	1/1:2,16:19:17.43:563,17,0	0/0:6,0:6:15.01:0,15,424
chr10	97461790	.	AAC	A	160.19	PASS	AB=0.976;AC=19;AF=0.396;AN=48;BaseQRankSum=4.857;DP=520;FS=0.000;HRun=0;HaplotypeScore=82.3143;InbreedingCoeff=0.4139;MQ=59.31;MQ0=12;MQRankSum=-4.897;QD=0.67;ReadPosRankSum=1.712;VQSLOD=0.9661;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:42.05:0,42,495	0/0:5,0:5:6.02:0,6,88	./.	./.	1/1:9,0:10:2.84:14,3,0	0/0:21,0:21:5.63:0,6,278	0/1:18,0:18:9.14:9,0,140	1/1:25,0:23:2.97:21,3,0	1/1:16,0:16:2.98:22,3,0	0/0:16,0:16:23.76:0,24,266	0/0:14,0:14:9.03:0,9,126	./.	0/0:15,0:15:4.57:0,5,48	0/1:20,0:20:3.52:4,0,164	0/1:22,1:23:2.16:2,0,327	0/0:12,0:12:6.02:0,6,89	0/1:32,3:35:2.29:2,0,318	1/1:23,0:23:14.20:70,14,0	./.	1/1:12,0:12:11.36:56,11,0	0/0:21,0:19:0:0,0,0	0/1:22,0:22:17.17:17,0,141	0/0:12,0:11:14.99:0,15,144	0/0:28,0:29:24.02:0,24,283	0/0:15,0:15:14.99:0,15,178	1/1:19,0:19:5.68:28,6,0	1/1:17,0:17:14.07:70,14,0	0/0:7,0:7:8.98:0,9,76
chr10	97462757	.	A	AG	4155.90	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-12.347;DP=786;FS=5.077;HRun=7;HaplotypeScore=73.5813;InbreedingCoeff=0.9990;MQ=83.18;MQ0=0;MQRankSum=-1.518;QD=28.08;ReadPosRankSum=-1.485;VQSLOD=3.8332;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,150,1443	0/0:12,0:12:36.06:0,36,348	0/0:26,0:26:40.96:0,41,529	0/0:21,0:21:48.03:0,48,446	0/0:22,0:22:54.07:0,54,515	0/0:23,0:23:66.10:0,66,637	0/0:38,0:38:99:0,99,934	0/0:24,0:24:57.02:0,57,534	0/0:27,0:27:75.12:0,75,724	0/0:37,0:37:96.14:0,96,923	0/0:20,0:20:57.09:0,57,550	0/0:38,0:38:99:0,105,1014	0/0:28,0:28:78.12:0,78,753	0/0:29,0:29:81.06:0,81,762	0/0:37,0:37:93.13:0,93,893	0/0:28,0:28:78.12:0,78,753	0/0:39,0:39:99:0,111,1063	0/0:34,0:34:96.11:0,96,918	1/1:2,18:20:54.15:640,54,0	1/1:2,17:19:42.13:507,42,0	1/1:10,48:58:99:1619,135,0	0/0:24,0:24:66.10:0,66,637	0/0:20,0:20:54.08:0,54,521	0/0:28,0:28:81.13:0,81,782	0/0:18,0:18:48.07:0,48,464	1/1:3,21:24:37.16:702,37,0	1/1:2,25:27:57.17:688,57,0	0/0:8,0:8:21.03:0,21,203
chr10	97463290	.	A	ATG	736.42	PASS	AB=0.799;AC=2;AF=0.036;AN=56;BaseQRankSum=6.955;DP=825;FS=7.075;HRun=0;HaplotypeScore=143.1353;InbreedingCoeff=-0.0432;MQ=57.15;MQ0=10;MQRankSum=0.144;QD=8.56;ReadPosRankSum=-0.113;VQSLOD=2.4459;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:33.70:0,34,384	0/0:6,0:6:17.89:0,18,223	0/0:33,0:16:33.03:0,33,427	0/0:33,0:15:18.07:0,18,391	0/0:21,0:21:48.12:0,48,639	0/0:30,0:30:51.22:0,51,914	0/0:28,0:28:75.25:0,75,1052	0/0:33,0:32:84.19:0,84,1101	0/0:36,0:36:99:0,99,1294	0/0:25,0:25:69.23:0,69,976	0/0:24,0:24:63.15:0,63,844	0/0:27,0:27:78.26:0,78,1093	0/0:29,0:29:68.96:0,69,926	0/0:14,0:14:30.09:0,30,407	0/0:36,0:36:96.26:0,96,1292	0/0:26,0:26:66.21:0,66,915	0/0:35,0:35:74.69:0,75,991	0/1:16,33:49:79.06:663,0,79	0/0:27,0:24:55.15:0,55,679	0/0:15,0:15:3.99:0,4,234	0/0:60,0:59:66.31:0,66,984	0/0:19,0:19:48.01:0,48,651	0/0:12,0:12:33.11:0,33,462	0/0:51,0:51:99:0,141,1991	0/0:38,0:37:99:0,99,1325	0/1:37,0:37:99:162,0,550	0/0:21,0:21:27.61:0,28,373	0/0:23,0:23:57.19:0,57,794
chr10	97465588	.	A	AT	221.09	PASS	AB=0.773;AC=2;AF=0.036;AN=56;BaseQRankSum=5.570;DP=657;FS=1.980;HRun=9;HaplotypeScore=72.0366;InbreedingCoeff=-0.0133;MQ=79.53;MQ0=0;MQRankSum=1.149;QD=7.13;ReadPosRankSum=-3.723;VQSLOD=0.8733;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,144,1240	0/0:11,0:11:29.99:0,30,260	0/0:23,0:23:2.20:0,2,236	0/1:19,0:18:1.47:1,0,92	0/0:26,0:26:74.94:0,75,642	0/0:33,0:33:89.98:0,90,781	0/0:18,0:18:50.99:0,51,443	0/0:27,0:27:62.92:0,63,534	0/0:23,0:23:65.94:0,66,566	0/0:32,0:32:72.84:0,73,624	0/0:15,0:15:44.90:0,45,372	0/0:24,0:24:71.96:0,72,619	0/0:28,0:28:77.97:0,78,677	0/0:19,0:19:47.99:0,48,417	0/0:23,0:23:62.96:0,63,543	0/0:18,1:19:20.78:0,21,405	0/0:19,0:19:56.99:0,57,495	0/1:2,10:12:16:295,0,16	0/0:26,0:26:56.95:0,57,489	0/0:28,0:28:71.96:0,72,622	0/0:18,0:18:44.98:0,45,388	0/0:25,0:27:73.05:0,73,608	0/0:22,0:22:65.97:0,66,569	0/0:22,0:22:62.99:0,63,547	0/0:27,0:27:68:0,68,574	0/0:25,0:25:65.65:0,66,553	0/0:31,0:31:86.95:0,87,751	0/0:6,0:6:12:0,12,104
chr10	97466391	.	CTT	C	2725.82	PASS	AB=0.896;AC=16;AF=0.286;AN=56;BaseQRankSum=4.545;DP=590;FS=4.099;HRun=13;HaplotypeScore=86.4124;InbreedingCoeff=0.8137;MQ=72.69;MQ0=8;MQRankSum=1.225;QD=14.42;ReadPosRankSum=4.225;VQSLOD=2.9185;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:31:72.01:748,72,0	0/0:8,0:8:24.07:0,24,316	0/0:45,1:22:6.60:0,7,242	0/0:30,0:17:13.47:0,13,134	0/0:21,0:21:57.60:0,58,744	0/1:7,1:8:8.05:8,0,217	0/0:21,1:24:27.17:0,27,637	0/1:24,2:28:21.67:22,0,566	0/0:19,0:19:54.13:0,54,686	0/0:22,1:26:35.49:0,35,702	0/0:16,0:19:44.40:0,44,508	0/0:23,0:23:64.98:0,65,827	0/0:21,0:24:57.45:0,57,679	0/0:15,0:16:43.33:0,43,429	0/0:17,0:20:26.59:0,27,563	0/0:20,0:21:57.15:0,57,747	0/0:35,0:36:86.92:0,87,1172	1/1:2,0:21:29.34:142,29,0	1/1:7,10:17:29.04:253,29,0	1/1:5,20:25:44.84:466,45,0	1/1:3,7:10:20.97:204,21,0	0/0:13,0:15:37.58:0,38,440	0/0:8,0:10:20.48:0,20,222	0/0:11,0:16:47.12:0,47,580	0/0:18,0:19:47.64:0,48,644	1/1:7,17:24:51.01:494,51,0	1/1:3,21:24:62.58:589,63,0	0/0:5,0:5:15.05:0,15,217
chr10	97467337	.	A	AAG	224.17	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=2.164;DP=445;FS=0.745;HRun=0;HaplotypeScore=80.5193;InbreedingCoeff=0.4610;MQ=46.47;MQ0=25;MQRankSum=-0.712;QD=7.01;ReadPosRankSum=0.579;VQSLOD=3.1142;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:28:19.57:0,20,339	0/0:5,0:5:14.91:0,15,118	0/0:14,0:9:1.33:0,1,105	0/1:6,0:4:10.50:11,0,47	0/0:19,0:19:41.08:0,41,323	0/0:11,0:10:26.81:0,27,220	0/0:12,0:12:34.30:0,34,298	0/0:32,0:30:62.25:0,62,485	0/0:10,0:10:28.45:0,28,205	0/0:16,0:16:41.48:0,41,333	0/0:13,0:13:32.90:0,33,288	0/0:20,0:18:44.60:0,45,379	0/0:14,0:14:41.85:0,42,380	0/0:16,0:15:12.10:0,12,248	0/0:13,0:13:30.08:0,30,244	0/0:17,0:17:38.66:0,39,394	0/0:31,0:25:64.55:0,65,601	1/1:19,6:20:24.18:315,24,0	0/0:14,0:13:29.29:0,29,222	0/0:15,0:15:6.69:0,7,193	0/0:10,0:10:20.53:0,21,134	0/0:8,0:8:20.90:0,21,174	0/0:12,0:11:23.91:0,24,210	0/0:21,0:16:7.91:0,8,92	0/0:11,0:10:26.81:0,27,222	0/0:15,0:15:6.57:0,7,185	0/0:18,0:18:16.11:0,16,168	0/0:15,0:13:32.94:0,33,302
chr10	97468800	.	CA	C	1631.90	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=5.826;DP=354;FS=18.326;HRun=1;HaplotypeScore=41.9679;InbreedingCoeff=0.9856;MQ=108.57;MQ0=0;MQRankSum=-4.585;QD=32.64;ReadPosRankSum=1.038;VQSLOD=1.7976;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,10:12:32.92:408,33,0	0/0:8,0:8:24.06:0,24,338	0/0:26,0:26:64.01:0,64,955	0/0:27,0:27:46.59:0,47,907	0/0:15,0:15:45.10:0,45,644	0/0:18,0:18:54.18:0,54,858	0/0:18,0:18:51.15:0,51,767	0/0:24,0:24:69.19:0,69,1015	0/0:7,0:7:21.06:0,21,312	0/0:10,0:10:30.07:0,30,452	0/0:7,0:7:21.07:0,21,332	0/0:16,0:16:45.13:0,45,674	0/0:12,0:12:36.11:0,36,550	0/0:17,0:17:51.16:0,51,781	0/0:17,0:17:51.17:0,51,810	0/0:18,0:18:53.90:0,54,781	0/0:17,0:17:51.16:0,51,790	1/1:0,5:5:15.05:208,15,0	1/1:0,7:6:18.06:250,18,0	1/1:0,6:6:17.85:217,18,0	1/1:0,8:8:18.06:246,18,0	0/0:9,0:9:27.08:0,27,408	0/0:7,0:7:21.07:0,21,335	0/0:9,0:9:27.07:0,27,401	0/0:13,0:13:38.86:0,39,564	1/1:0,7:7:21.07:291,21,0	1/1:0,5:5:15.05:208,15,0	0/0:9,0:9:27.08:0,27,405
chr10	97470325	.	CGTGCGT	C	715.47	PASS	AB=0.986;AC=6;AF=0.107;AN=56;BaseQRankSum=6.489;DP=594;FS=0.764;HRun=0;HaplotypeScore=126.8008;InbreedingCoeff=0.7093;MQ=59.11;MQ0=24;MQRankSum=-4.694;QD=6.69;ReadPosRankSum=0.279;VQSLOD=2.0574;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,8:19:29.90:332,30,0	0/0:10,0:10:30.02:0,30,858	0/1:29,0:8:7.14:7,0,39	0/1:33,0:11:0.21:0,0,87	0/0:12,0:11:30.03:0,30,800	0/0:16,0:16:33.06:0,33,794	0/0:36,0:36:95.75:0,96,2477	0/0:26,0:26:71.99:0,72,1431	0/0:13,0:13:35.54:0,36,694	0/0:20,0:18:45.04:0,45,1043	0/0:12,0:11:29.91:0,30,715	0/0:14,0:14:33.04:0,33,781	0/0:17,0:17:45.04:0,45,1033	0/0:24,0:24:65.15:0,65,1551	0/0:20,0:19:57.12:0,57,1583	0/0:15,0:15:42.11:0,42,1142	0/0:35,0:35:93.18:0,93,2273	1/1:4,16:21:27.03:501,27,0	0/0:19,0:18:45.05:0,45,866	0/0:16,0:14:29.98:0,30,545	0/0:49,0:47:99:0,115,2609	0/0:12,0:12:33.08:0,33,877	0/0:15,0:14:32.29:0,32,644	0/0:42,0:41:99:0,111,2545	0/0:25,0:24:57.15:0,57,1548	0/0:17,0:16:41.96:0,42,885	0/0:11,0:10:11.92:0,12,374	0/0:11,0:9:27:0,27,715
chr10	97470329	.	CGT	C	306.19	PASS	AB=0.981;AC=12;AF=0.214;AN=56;BaseQRankSum=3.423;DP=643;FS=11.017;HRun=0;HaplotypeScore=96.4692;InbreedingCoeff=0.0557;MQ=57.68;MQ0=30;MQRankSum=-1.207;QD=1.20;ReadPosRankSum=1.464;VQSLOD=1.1262;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:19:2.37:8,2,0	0/0:10,0:10:24.08:0,24,364	0/0:27,0:6:6.01:0,6,61	0/0:33,0:10:2.80:0,3,13	0/0:15,0:14:28.63:0,29,390	0/1:15,0:14:43.08:43,0,275	0/0:36,0:36:4.51:0,5,890	0/0:27,0:27:36.07:0,36,507	0/1:14,1:14:10.15:10,0,264	0/0:23,0:21:20.78:0,21,504	0/0:15,0:14:20.14:0,20,310	0/0:15,0:15:27.06:0,27,336	0/0:19,0:19:10.19:0,10,434	0/0:28,0:27:20.19:0,20,634	0/0:26,0:25:57.14:0,57,767	0/0:17,0:17:45.09:0,45,593	0/1:37,1:38:61.13:61,0,875	1/1:21,0:20:19.23:106,19,0	0/0:22,0:20:31.72:0,32,345	0/1:14,1:13:21.29:21,0,121	0/1:51,0:47:33.57:34,0,876	0/1:14,0:13:5.86:6,0,358	0/0:12,0:11:12.04:0,12,188	0/1:49,0:47:99:100,0,993	0/0:29,1:27:58.75:0,59,698	0/0:22,0:21:38.43:0,38,420	0/1:15,0:14:64.79:65,0,71	0/0:11,0:9:21.05:0,21,293
chr10	97470350	.	GGT	G	1142.06	PASS	AB=0.974;AC=25;AF=0.481;AN=52;BaseQRankSum=5.043;DP=688;FS=4.321;HRun=0;HaplotypeScore=102.8534;InbreedingCoeff=-0.6439;MQ=51.86;MQ0=44;MQRankSum=-0.085;QD=1.89;ReadPosRankSum=-0.558;VQSLOD=1.7100;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:4.81:24,5,0	0/0:9,0:8:9.03:0,9,131	./.	./.	0/1:13,0:12:20.07:20,0,123	0/1:15,0:14:4.64:5,0,152	0/1:37,1:37:57.27:85,0,57	0/0:23,0:19:11.91:0,12,88	0/1:18,0:15:10.75:11,0,218	0/1:21,5:23:55.13:55,0,190	0/1:17,0:16:16.79:17,0,229	0/1:18,0:17:46.48:46,0,246	0/1:20,0:21:61.29:61,0,194	0/1:34,0:33:78.01:78,0,413	0/1:30,0:28:38.46:38,0,314	0/1:21,0:18:23.65:24,0,350	0/1:43,0:44:99:103,0,478	1/1:25,0:24:6.03:151,6,0	0/1:27,0:24:61.82:62,0,94	0/1:13,0:11:38.06:38,0,86	0/1:56,0:49:78.29:78,0,521	0/1:16,0:14:8.84:9,0,101	0/0:10,0:9:4.11:0,4,166	0/1:53,1:51:99:147,0,602	0/1:28,1:26:99:105,0,303	0/1:19,6:22:97.12:97,0,135	0/1:14,0:13:26.86:27,0,197	0/1:12,0:10:8.44:8,0,156
chr10	97470386	.	TGTGC	T	492.42	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=4.755;DP=625;FS=21.414;HRun=0;HaplotypeScore=119.3579;InbreedingCoeff=0.3383;MQ=57.40;MQ0=26;MQRankSum=-3.236;QD=4.65;ReadPosRankSum=-2.343;VQSLOD=0.5204;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,5:30:31.75:335,32,0	0/0:9,0:8:23.91:0,24,320	0/0:10,0:6:3.92:0,4,61	0/0:15,0:8:22.01:0,22,115	0/0:11,0:11:10.08:0,10,318	0/0:16,0:15:14.73:0,15,497	0/1:26,0:24:60.62:61,0,404	0/0:21,0:18:50.59:0,51,413	0/0:21,0:19:26.93:0,27,675	0/0:22,0:21:50.39:0,50,669	0/0:14,0:14:30.53:0,31,624	0/0:20,0:19:43.59:0,44,658	0/1:24,0:24:15.01:15,0,522	0/0:31,0:29:49.35:0,49,1171	0/0:26,0:25:11.08:0,11,739	0/0:21,0:18:10.85:0,11,732	0/0:41,0:42:81.82:0,82,1379	0/1:24,0:24:3.34:204,0,3	0/0:22,0:20:18:0,18,398	0/0:15,0:14:3.32:0,3,276	0/0:46,0:40:23.33:0,23,1220	0/0:12,0:10:25.50:0,25,351	0/0:12,0:12:21.79:0,22,424	0/0:54,0:51:76.36:0,76,1839	0/0:28,0:26:58:0,58,889	0/0:21,0:19:12.49:0,12,410	0/0:20,0:20:9.22:0,9,682	0/0:10,0:10:29.94:0,30,508
chr10	97473538	.	AC	A	976.62	PASS	AB=0.912;AC=14;AF=0.250;AN=56;BaseQRankSum=1.941;DP=489;FS=20.866;HRun=10;HaplotypeScore=65.3126;InbreedingCoeff=0.0165;MQ=86.99;MQ0=0;MQRankSum=-0.586;QD=4.63;ReadPosRankSum=1.554;VQSLOD=0.2077;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,21:33:59:500,59,0	0/1:7,2:9:5.04:5,0,158	0/1:17,2:21:12.91:13,0,266	0/0:22,0:21:11.17:0,11,218	0/0:17,0:17:23.69:0,24,220	0/1:14,1:15:30.44:30,0,123	0/0:28,1:29:3.11:0,3,380	0/0:30,1:30:3.46:0,3,247	0/0:13,0:13:16.98:0,17,214	0/0:9,0:9:6.02:0,6,66	0/0:9,0:9:16.23:0,16,136	0/0:19,1:21:20.82:0,21,430	0/0:17,1:18:13.78:0,14,297	0/0:17,1:18:11.71:0,12,295	0/0:17,0:17:31.82:0,32,351	0/0:16,0:16:35.31:0,35,373	0/1:18,3:21:57.38:57,0,260	1/1:1,15:16:41.99:365,42,0	0/1:14,0:14:7.40:7,0,215	0/1:8,2:10:25.08:25,0,179	0/1:21,3:25:40.25:40,0,163	0/1:18,0:18:1.54:2,0,189	0/1:7,0:7:15.78:16,0,59	0/0:18,0:18:25.74:0,26,307	0/0:19,1:20:3.63:0,4,235	0/0:10,0:10:10.95:0,11,91	0/1:18,4:22:72.69:73,0,234	0/0:10,0:10:11.79:0,12,100
chr10	97476109	.	G	GT	1125.61	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-8.293;DP=541;FS=3.094;HRun=8;HaplotypeScore=49.0081;InbreedingCoeff=0.8549;MQ=73.15;MQ0=0;MQRankSum=-1.724;QD=20.47;ReadPosRankSum=0.899;VQSLOD=3.4818;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:24:51.15:589,51,0	0/0:10,0:10:27.01:0,27,247	0/0:16,1:17:29.91:0,30,249	0/1:7,0:7:1.88:2,0,66	0/0:26,0:26:72.01:0,72,653	0/0:22,0:22:54.02:0,54,494	0/0:16,0:16:39:0,39,351	0/0:27,0:27:63.02:0,63,576	0/0:21,0:21:26.49:0,26,456	0/0:28,0:28:71.98:0,72,651	0/0:23,1:24:31.43:0,31,542	0/0:17,0:17:48.03:0,48,439	0/0:20,0:20:54.03:0,54,494	0/0:18,0:18:45:0,45,406	0/0:18,0:18:48.02:0,48,439	0/0:29,0:29:72.01:0,72,654	0/0:14,0:14:36.02:0,36,329	1/1:2,22:24:57.17:658,57,0	0/0:15,0:15:30.01:0,30,275	0/0:20,0:20:57.03:0,57,520	0/0:17,0:17:42.02:0,42,384	0/0:14,0:14:33.01:0,33,302	0/0:13,0:13:39.02:0,39,357	0/0:16,0:16:45.02:0,45,412	0/0:22,0:22:66.04:0,66,602	0/0:25,0:25:63.03:0,63,577	0/0:21,0:21:63.03:0,63,576	0/0:16,0:16:42.01:0,42,384
chr10	97478814	.	AT	A	820.41	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.069;DP=509;FS=1.223;HRun=11;HaplotypeScore=51.4544;InbreedingCoeff=0.9070;MQ=77.59;MQ0=0;MQRankSum=-1.211;QD=16.74;ReadPosRankSum=1.319;VQSLOD=4.5220;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:59.93:493,60,0	0/0:12,0:12:21.05:0,21,224	0/0:18,0:16:28:0,28,235	0/0:10,1:10:8.97:0,9,78	0/0:29,0:29:84.16:0,84,870	0/0:20,0:20:54.13:0,54,568	0/0:8,0:8:21.03:0,21,214	0/0:32,2:34:28.88:0,29,692	0/0:15,0:15:45.11:0,45,480	0/0:14,0:14:5.66:0,6,263	0/0:37,0:37:86.98:0,87,960	0/0:6,0:6:18.05:0,18,192	0/0:7,0:7:21.04:0,21,216	0/0:13,0:13:30.07:0,30,319	0/0:14,0:13:36.06:0,36,368	0/0:21,0:21:56.98:0,57,579	0/0:20,0:20:57.14:0,57,603	1/1:5,20:26:55.95:449,56,0	0/0:11,0:11:30.06:0,30,313	0/0:25,2:27:25.89:0,26,679	0/0:11,0:11:30.08:0,30,320	0/0:11,0:11:30.08:0,30,320	0/0:23,0:23:63.16:0,63,671	0/0:14,0:14:39.05:0,39,391	0/0:28,0:30:68.80:0,69,687	0/0:19,0:19:51.13:0,51,544	0/0:21,0:21:57.14:0,57,604	0/0:13,0:13:33.06:0,33,343
chr10	97479068	.	C	CT	1967.33	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.323;DP=518;FS=0.577;HRun=3;HaplotypeScore=94.9230;InbreedingCoeff=0.8921;MQ=84.09;MQ0=0;MQRankSum=-8.216;QD=36.43;ReadPosRankSum=0.526;VQSLOD=3.6799;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:39:96.33:1515,96,0	0/0:7,0:7:21.07:0,21,288	0/0:24,0:24:58.76:0,59,752	0/0:18,0:18:1.94:0,2,372	0/0:12,0:12:33.07:0,33,436	0/0:17,0:16:48.11:0,48,623	0/0:25,0:25:69.23:0,69,960	0/0:25,0:25:65.97:0,66,839	0/0:12,0:12:36.12:0,36,498	0/0:11,0:11:30.10:0,30,418	0/0:15,0:15:45.15:0,45,628	0/0:16,0:16:48.09:0,48,597	0/0:22,0:22:63.20:0,63,860	0/0:21,0:21:63.15:0,63,822	0/0:18,0:18:48.12:0,48,648	0/0:16,0:16:42.14:0,42,586	0/0:34,0:34:99:0,102,1399	1/1:0,15:15:36.12:574,36,0	0/0:24,0:24:66.16:0,66,888	0/0:10,0:10:20.92:0,21,249	0/0:25,0:25:47:0,47,484	0/0:5,0:5:15.05:0,15,210	0/0:10,0:10:30.10:0,30,415	0/0:23,0:23:69.19:0,69,940	0/0:25,0:25:75.11:0,75,995	0/0:20,0:20:60.20:0,60,815	0/0:20,0:20:57.06:0,57,745	0/0:9,0:9:27.09:0,27,377
chr10	97479081	.	CG	C	1742.35	PASS	AB=0.517;AC=13;AF=0.232;AN=56;BaseQRankSum=14.374;DP=490;FS=0.000;HRun=1;HaplotypeScore=92.6656;InbreedingCoeff=0.9231;MQ=83.62;MQ0=0;MQRankSum=-14.253;QD=17.08;ReadPosRankSum=3.421;VQSLOD=3.9598;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:77.59:575,78,0	0/0:6,0:6:18.02:0,18,258	0/0:20,0:20:37.08:0,37,836	0/0:19,0:19:50.85:0,51,666	0/0:15,0:15:42.12:0,42,631	0/0:18,0:17:50.98:0,51,750	0/0:26,0:26:78.24:0,78,1186	0/0:26,0:26:69.21:0,69,1036	0/0:15,0:15:45.10:0,45,645	0/0:14,0:14:39.11:0,39,566	0/0:16,0:16:45.14:0,45,692	0/0:14,0:14:42.14:0,42,668	0/0:29,0:29:87.15:0,87,1282	0/0:20,0:20:60.17:0,60,907	0/0:16,0:16:48.16:0,48,760	0/0:19,0:19:54.17:0,54,834	0/0:33,0:33:93.30:0,93,1459	1/1:0,8:8:23.96:196,24,0	1/1:1,12:13:38.82:311,39,0	1/1:0,7:7:14.93:116,15,0	1/1:1,13:14:17.86:143,18,0	0/0:5,0:5:15.05:0,15,234	0/0:17,0:17:50.93:0,51,670	0/0:25,0:25:75.20:0,75,1143	0/0:27,0:27:78.27:0,78,1236	0/1:1,14:15:3.17:273,0,3	1/1:1,13:15:41.80:317,42,0	0/0:8,0:8:21.04:0,21,303
chr10	97479083	.	AAACATC	A	4923.97	PASS	AB=0.517;AC=13;AF=0.232;AN=56;BaseQRankSum=14.079;DP=493;FS=0.437;HRun=0;HaplotypeScore=129.9606;InbreedingCoeff=0.8898;MQ=83.52;MQ0=0;MQRankSum=-14.117;QD=49.24;ReadPosRankSum=3.541;VQSLOD=4.8579;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:81.28:1504,81,0	0/0:6,0:6:18.06:0,18,671	0/0:21,0:21:61.09:0,61,1901	0/0:18,0:18:48.16:0,48,1462	0/0:14,0:14:42.14:0,42,1581	0/0:18,0:17:51.18:0,51,1858	0/0:27,0:27:81.28:0,81,2884	0/0:27,0:27:75.26:0,75,2802	0/0:14,0:14:42.14:0,42,1497	0/0:15,0:15:42.14:0,42,1549	0/0:16,0:16:48.16:0,48,1806	0/0:16,0:16:48.16:0,48,1780	0/0:29,0:29:84.29:0,84,3039	0/0:21,0:21:63.22:0,63,2296	0/0:17,0:17:51.18:0,51,1844	0/0:19,0:19:57.20:0,57,2048	0/0:31,0:31:90.31:0,90,3257	1/1:1,8:9:24.08:476,24,0	1/1:1,12:13:39.13:758,39,0	1/1:1,6:7:15.05:290,15,0	1/1:0,13:13:18.06:329,18,0	0/0:5,0:5:15.05:0,15,565	0/0:17,0:17:48.16:0,48,1806	0/0:26,0:26:78.27:0,78,2936	0/0:28,0:28:84.29:0,84,3142	0/1:1,14:15:67.84:764,0,68	1/1:1,13:14:42.14:803,42,0	0/0:8,0:8:24.08:0,24,902
chr10	97480990	.	GCGCGCGCACGCACACACACGCACACACACA	G	164.32	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=1.847;DP=352;FS=0.000;HRun=0;HaplotypeScore=216.3027;InbreedingCoeff=0.4416;MQ=66.01;MQ0=5;MQRankSum=-0.889;QD=9.67;ReadPosRankSum=-0.544;VQSLOD=2.0866;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:21.07:0,21,790	0/0:5,0:5:12.04:0,12,533	0/1:5,0:3:4.96:5,0,52	0/0:12,0:7:8.52:0,9,45	0/0:13,0:12:30.03:0,30,1577	0/0:13,0:13:30.90:0,31,2719	0/0:15,0:15:31.19:0,31,2193	0/0:26,0:26:65.21:0,65,1089	0/0:9,0:8:21.54:0,22,629	0/0:15,0:15:42.14:0,42,3083	0/0:10,0:9:18.06:0,18,975	0/0:6,0:6:15.05:0,15,438	0/0:7,0:7:12.18:0,12,567	0/0:9,0:9:23.44:0,23,1166	0/0:5,0:5:12.04:0,12,432	0/0:10,0:9:20.59:0,21,1432	0/0:35,0:33:85.22:0,85,6239	1/1:0,12:12:3.01:241,3,0	0/0:10,0:9:21.03:0,21,1769	0/0:14,0:14:30.10:0,30,846	0/0:15,0:15:39.59:0,40,2450	0/0:10,0:10:27.09:0,27,1872	0/0:14,0:12:30.10:0,30,2114	0/0:20,0:20:36.12:0,36,2869	0/0:10,0:10:21.07:0,21,1503	0/0:20,0:20:57.15:0,57,3770	0/0:7,0:7:17.68:0,18,1333	0/0:10,0:10:27.09:0,27,1016
chr10	97481010	.	GCA	G	147.20	PASS	AB=0.971;AC=13;AF=0.250;AN=52;BaseQRankSum=2.179;DP=386;FS=4.062;HRun=0;HaplotypeScore=59.7659;InbreedingCoeff=0.4113;MQ=48.07;MQ0=25;MQRankSum=0.860;QD=1.16;ReadPosRankSum=-2.190;VQSLOD=0.7143;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,1:12:23.76:26,0,24	1/1:7,0:7:2.95:19,3,0	./.	./.	1/1:12,0:11:6.90:63,7,0	0/0:13,0:13:9.03:0,9,131	0/0:19,0:18:12.48:0,12,173	0/0:24,0:23:9.01:0,9,86	0/1:6,0:4:0:0,0,0	0/0:20,0:20:19.29:0,19,231	1/1:13,0:12:5.04:38,5,0	0/0:6,0:6:3.01:0,3,45	0/0:10,0:9:3.01:0,3,45	0/0:7,0:7:3.48:0,3,46	0/0:4,0:4:3.01:0,3,44	1/1:11,4:14:8.89:97,9,0	0/1:40,1:38:29:29,0,437	1/1:16,0:15:2.71:14,3,0	0/0:14,0:12:12.03:0,12,143	0/0:13,0:11:0:0,0,0	0/0:16,0:16:12.03:0,12,157	0/0:9,0:8:9.02:0,9,115	0/0:16,0:14:2.88:0,3,44	0/0:26,1:25:14.72:0,15,218	0/0:14,0:13:12.02:0,12,140	0/0:25,0:22:22.90:0,23,201	0/0:12,0:12:17.97:0,18,158	0/0:4,0:4:6.02:0,6,84
chr10	97481167	.	G	GCAGTTTCC	4153.33	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.085;DP=500;FS=9.569;HRun=0;HaplotypeScore=120.3633;InbreedingCoeff=0.9455;MQ=86.53;MQ0=0;MQRankSum=-8.865;QD=90.29;ReadPosRankSum=-0.222;VQSLOD=3.9274;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,15:31:66.23:2746,66,0	0/0:3,0:3:9.03:0,9,252	0/0:14,0:14:42.13:0,42,1090	0/0:23,0:23:26.98:0,27,1367	0/0:10,0:10:30.09:0,30,776	0/0:23,0:23:63.20:0,63,1702	0/0:18,0:18:51.15:0,51,1358	0/0:32,0:32:87.23:0,87,2133	0/0:14,0:14:42.14:0,42,1144	0/0:21,0:21:63.22:0,63,1763	0/0:8,0:8:18.06:0,18,504	0/0:18,0:18:48.16:0,48,1311	0/0:15,0:15:45.15:0,45,1259	0/0:15,0:15:42.14:0,42,1137	0/0:17,0:16:48.16:0,48,1343	0/0:19,0:19:54.19:0,54,1477	0/0:36,0:36:90.31:0,90,2512	1/1:5,10:15:33.11:1407,33,0	0/0:18,0:18:45.15:0,45,1259	0/0:7,0:7:21.07:0,21,587	0/0:33,0:33:87.30:0,87,2416	0/0:5,0:5:12.04:0,12,326	0/0:14,0:14:39.13:0,39,1079	0/0:26,0:26:75.22:0,75,1939	0/0:6,0:6:18.06:0,18,504	0/0:23,0:23:54.15:0,54,1369	0/0:21,0:21:60.19:0,60,1620	0/0:15,0:15:45.15:0,45,1259
chr10	97481462	.	GTATATATATATATATATA	G	72.75	PASS	AC=2;AF=0.143;AN=14;BaseQRankSum=0.704;DP=182;FS=0.000;HRun=0;HaplotypeScore=82.3639;MQ=80.34;MQ0=3;MQRankSum=-2.057;QD=14.55;ReadPosRankSum=0.817;VQSLOD=1.2061;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:11,0:5:0.89:0,1,2	./.	./.	./.	0/0:25,0:24:33.11:0,33,1502	./.	./.	./.	./.	0/0:5,0:7:6.02:0,6,149	./.	./.	./.	0/0:27,0:29:60.19:0,60,3863	1/1:2,0:5:5.97:145,6,0	./.	./.	./.	./.	./.	0/0:3,0:3:6:0,6,143	./.	./.	./.	0/0:10,0:10:18.06:0,18,1310
chr10	97481528	.	GTA	G	145.76	PASS	AC=4;AF=0.080;AN=50;BaseQRankSum=3.269;DP=158;FS=1.748;HRun=0;HaplotypeScore=28.1071;InbreedingCoeff=0.3581;MQ=57.56;MQ0=4;MQRankSum=-0.362;QD=7.67;ReadPosRankSum=-1.323;VQSLOD=2.3751;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:11.83:0,12,197	0/0:4,0:4:9.03:0,9,149	1/1:8,0:4:1.03:3,1,0	./.	0/0:3,0:3:6.02:0,6,97	0/0:5,0:5:15.05:0,15,255	0/0:4,0:4:12.04:0,12,200	0/0:21,0:20:54.15:0,54,844	./.	0/0:2,0:2:6.02:0,6,102	0/0:5,0:5:15.05:0,15,242	0/0:1,0:1:3.01:0,3,51	0/0:3,0:3:8.82:0,9,115	0/0:1,0:1:3.01:0,3,51	0/0:3,0:3:8.76:0,9,107	0/0:1,0:1:3.01:0,3,51	0/0:21,0:20:46.04:0,46,720	1/1:1,10:11:18.06:234,18,0	0/0:1,0:1:3.01:0,3,40	0/0:1,0:1:3.01:0,3,51	0/0:4,0:4:9.03:0,9,153	0/0:2,0:2:6.02:0,6,102	./.	0/0:2,0:2:6:0,6,75	0/0:5,0:5:12.04:0,12,194	0/0:4,0:4:11.78:0,12,165	0/0:7,0:7:20.74:0,21,318	0/0:12,0:11:25.61:0,26,339
chr10	97481644	.	C	CGT	158.34	PASS	AB=1.000;AC=11;AF=0.229;AN=48;BaseQRankSum=0.701;DP=436;FS=9.652;HRun=0;HaplotypeScore=57.9544;InbreedingCoeff=0.0967;MQ=69.51;MQ0=10;MQRankSum=-1.879;QD=0.98;ReadPosRankSum=-0.391;VQSLOD=0.3503;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:18:12.16:0,12,94	0/0:3,0:3:6.02:0,6,65	./.	./.	./.	0/1:13,0:13:11.92:12,0,81	0/0:16,0:16:1.40:0,1,58	0/0:20,0:19:1.23:0,1,18	0/0:9,0:10:2.84:0,3,14	0/0:13,0:12:3:0,3,32	0/0:1,0:2:2.84:0,3,14	0/0:13,0:13:9.02:0,9,96	1/1:17,0:17:3.38:22,3,0	0/0:6,0:6:2.97:0,3,20	0/0:20,0:21:27.35:0,27,259	0/1:12,0:12:2.13:2,0,26	0/1:25,0:24:42.58:43,0,197	1/1:7,8:15:9.03:133,9,0	./.	0/0:12,0:11:3:0,3,32	0/1:45,0:46:18.98:19,0,137	0/0:12,0:12:15.44:0,15,148	0/0:10,0:10:6.01:0,6,65	0/1:17,0:19:9.21:9,0,193	0/0:9,0:10:5.85:0,6,46	1/1:12,2:13:3.01:44,3,0	0/0:16,0:16:15.02:0,15,162	0/0:13,0:14:7.87:0,8,116
chr10	97482180	.	G	GA	789.58	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.678;DP=539;FS=5.661;HRun=9;HaplotypeScore=64.8242;InbreedingCoeff=0.8607;MQ=65.95;MQ0=4;MQRankSum=1.381;QD=9.99;ReadPosRankSum=-0.085;VQSLOD=2.1805;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:31:33.19:341,33,0	0/0:11,0:11:29.99:0,30,260	0/0:9,0:7:5.87:0,6,41	0/0:5,0:5:4.31:0,4,14	0/0:25,0:25:56.94:0,57,491	0/0:20,0:20:53.99:0,54,469	0/0:10,0:10:23.98:0,24,208	0/0:25,0:25:53.72:0,54,460	0/0:12,0:12:29.99:0,30,260	0/0:29,0:29:74.98:0,75,649	0/0:26,0:26:62.96:0,63,543	0/0:16,0:16:35.98:0,36,313	0/0:22,0:22:53.97:0,54,465	0/0:13,0:13:29.99:0,30,260	0/0:18,0:18:38.95:0,39,335	0/0:15,0:15:41.99:0,42,364	0/0:31,0:31:77.48:0,77,660	0/0:11,0:11:23.98:0,24,208	1/1:3,14:17:42.08:450,42,0	0/0:24,0:24:4.80:0,5,207	0/0:14,0:14:33.73:0,34,167	0/0:14,0:14:35.99:0,36,312	0/0:22,1:22:53.99:0,54,468	0/0:12,0:12:29.98:0,30,260	0/0:15,0:15:38.99:0,39,338	1/1:30,0:29:10.08:136,10,0	0/0:26,0:26:64.13:0,64,323	0/0:34,0:34:95.97:0,96,833
chr10	97482188	.	A	AT	738.90	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=3.183;DP=533;FS=7.809;HRun=0;HaplotypeScore=63.3901;InbreedingCoeff=0.7131;MQ=64.79;MQ0=4;MQRankSum=0.721;QD=15.72;ReadPosRankSum=0.567;VQSLOD=5.3904;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:30:53.23:807,53,0	0/0:11,0:11:33.08:0,33,439	0/0:10,0:8:17.62:0,18,167	0/0:5,0:5:0.97:0,1,21	0/0:25,0:25:72.10:0,72,885	0/0:20,0:20:60.18:0,60,804	0/0:12,0:12:36.07:0,36,422	0/0:24,0:24:72.16:0,72,872	0/0:12,0:12:36.09:0,36,447	0/0:28,0:28:57.27:0,57,1023	0/0:26,0:26:69.19:0,69,922	0/0:14,0:14:42.12:0,42,556	0/0:21,0:21:60.18:0,60,790	0/0:12,0:12:33.10:0,33,430	0/0:13,0:13:39.13:0,39,536	0/0:16,0:16:48.14:0,48,615	0/0:27,0:28:81.19:0,81,1089	0/0:11,0:11:30.06:0,30,383	0/1:16,0:16:1.35:37,0,1	0/0:26,0:26:74.10:0,74,822	0/0:13,0:13:39.09:0,39,473	0/0:12,0:12:36.12:0,36,486	0/0:23,0:22:60.15:0,60,783	0/0:12,0:12:36.10:0,36,455	0/0:13,0:13:39.13:0,39,528	0/0:34,0:33:80.51:0,81,700	0/0:27,0:27:81.21:0,81,980	0/0:38,0:38:99:0,108,1414
chr10	97482189	.	AT	A	1169.47	PASS	AB=0.988;AC=5;AF=0.089;AN=56;BaseQRankSum=2.411;DP=530;FS=1.960;HRun=1;HaplotypeScore=60.1199;InbreedingCoeff=0.3110;MQ=64.80;MQ0=4;MQRankSum=-1.041;QD=11.47;ReadPosRankSum=-3.283;VQSLOD=0.6727;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:60.05:0,60,561	0/0:11,0:11:33.06:0,33,436	0/0:10,0:8:17.93:0,18,161	0/0:5,0:5:7.87:0,8,47	0/0:24,0:24:71.98:0,72,872	0/0:20,0:20:60.17:0,60,801	0/0:12,0:12:36.06:0,36,416	0/0:24,0:24:72.15:0,72,872	0/0:12,0:12:36.06:0,36,420	0/0:28,0:28:84.17:0,84,1067	0/0:26,0:26:69.08:0,69,920	0/0:14,0:14:42.13:0,42,568	0/0:21,0:21:63.15:0,63,795	0/0:12,0:12:36.08:0,36,451	0/0:13,0:13:39.12:0,39,528	0/0:16,0:16:48.10:0,48,588	0/0:28,0:28:69.25:0,69,1058	0/0:11,0:11:30.09:0,30,397	0/1:16,0:16:22.08:22,0,166	0/1:25,1:26:52.31:131,0,52	0/0:13,0:13:1.23:0,1,46	0/0:12,0:12:36.10:0,36,470	0/0:23,0:22:63.07:0,63,784	0/0:12,0:12:36.08:0,36,450	0/0:13,0:13:39.12:0,39,528	1/1:2,32:33:52.58:1130,53,0	0/1:26,0:26:4.36:4,0,72	0/0:38,0:38:99:0,108,1382
chr10	97482463	.	GCTT	G	183.94	PASS	AB=1.000;AC=11;AF=0.250;AN=44;BaseQRankSum=-1.042;DP=547;FS=6.479;HRun=0;HaplotypeScore=78.5030;InbreedingCoeff=0.2822;MQ=69.93;MQ0=25;MQRankSum=0.547;QD=1.43;ReadPosRankSum=0.689;VQSLOD=0.6933;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:5.33:0,5,26	0/0:6,0:6:0:0,0,0	./.	./.	1/1:15,6:21:3.01:37,3,0	./.	0/0:19,0:15:1.25:0,1,3	./.	0/1:25,0:25:7.75:16,0,8	0/0:23,0:22:8.53:0,9,86	0/0:18,0:18:4.23:0,4,50	0/0:21,0:21:3.01:0,3,49	0/1:16,0:15:7.05:30,0,7	0/0:18,0:17:5.67:0,6,29	0/1:20,0:20:8.57:14,0,9	0/0:19,0:18:0.47:0,0,1	0/0:22,0:21:10.80:0,11,110	0/0:21,0:19:0:0,0,0	0/0:21,0:21:2.99:0,3,23	1/1:13,0:13:6.01:59,6,0	./.	./.	1/1:11,1:12:3.01:37,3,0	0/0:23,0:21:2.90:0,3,20	0/0:16,0:14:4.25:0,4,29	0/0:12,0:12:5.19:0,5,21	1/1:18,4:21:9.03:111,9,0	0/0:26,0:24:5.99:0,6,48
chr10	97482690	.	T	TG	46.07	PASS	AB=0.722;AC=1;AF=0.018;AN=56;BaseQRankSum=5.038;DP=565;FS=1.522;HRun=0;HaplotypeScore=75.0495;InbreedingCoeff=-0.0226;MQ=49.56;MQ0=22;MQRankSum=-4.745;QD=3.54;ReadPosRankSum=-1.852;VQSLOD=2.7347;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,5:12:99:120,0,118	0/0:3,0:3:9.03:0,9,126	0/0:11,0:4:12.01:0,12,146	0/0:13,0:7:16.30:0,16,249	0/0:22,0:22:60.20:0,60,836	0/0:18,0:18:54.13:0,54,717	0/0:29,0:27:78.17:0,78,1062	0/0:18,0:9:18.06:0,18,252	0/0:26,0:25:66.22:0,66,921	0/0:29,0:28:84.28:0,84,1165	0/0:8,0:8:24.08:0,24,335	0/0:30,0:30:77.25:0,77,1067	0/0:20,0:16:45.15:0,45,627	0/0:27,0:27:75.17:0,75,1000	0/0:34,0:34:90.30:0,90,1259	0/0:35,0:35:99:0,105,1430	0/0:35,0:32:86.35:0,86,1230	0/0:8,0:7:17.95:0,18,222	0/0:14,0:7:21.07:0,21,292	0/0:18,0:17:45.15:0,45,629	0/0:27,0:26:78.24:0,78,1072	0/0:18,0:18:51.16:0,51,696	0/0:13,0:13:39.12:0,39,528	0/0:37,2:37:69.83:0,70,1119	0/0:16,0:16:48.16:0,48,670	0/0:16,0:15:39.59:0,40,528	0/0:10,0:10:30.10:0,30,419	0/0:15,0:15:45.15:0,45,629
chr10	97482832	.	TC	T	5649.93	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-3.764;DP=505;FS=9.245;HRun=11;HaplotypeScore=64.3030;InbreedingCoeff=0.6315;MQ=72.14;MQ0=1;MQRankSum=-2.264;QD=11.87;ReadPosRankSum=1.850;VQSLOD=3.8810;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,16:30:47.95:352,48,0	1/1:8,3:11:20.77:154,21,0	0/1:20,0:20:7.31:7,0,91	0/0:18,0:14:1.58:0,2,66	1/1:10,10:20:23.92:195,24,0	1/1:12,8:20:23.95:196,24,0	1/1:8,15:23:41.91:345,42,0	1/1:9,5:14:11.95:98,12,0	1/1:4,19:23:38.94:320,39,0	1/1:11,11:23:37.93:294,38,0	1/1:2,8:10:23.90:189,24,0	1/1:4,15:19:32.95:270,33,0	1/1:3,15:18:26.79:221,27,0	1/1:4,14:19:23.50:199,23,0	1/1:9,11:20:6.83:255,7,0	1/1:8,26:34:30.89:454,31,0	1/1:13,15:28:55.82:426,56,0	0/0:9,0:10:14.66:0,15,91	1/1:7,10:19:31.77:207,32,0	1/1:7,9:16:26.43:187,26,0	1/1:7,9:17:20:154,20,0	1/1:3,9:12:26.92:215,27,0	1/1:4,8:13:17:129,17,0	1/1:5,12:17:23.94:197,24,0	1/1:4,10:14:17.96:148,18,0	1/1:9,8:17:26.87:208,27,0	1/1:6,9:15:20.43:157,20,0	1/1:0,4:4:8.99:74,9,0
chr10	97484914	.	C	CGGGAGATG	4114.31	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.358;DP=571;FS=0.686;HRun=0;HaplotypeScore=151.3166;InbreedingCoeff=0.9715;MQ=82.13;MQ0=0;MQRankSum=-9.195;QD=100.35;ReadPosRankSum=-0.532;VQSLOD=3.8814;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,20:34:81.28:3560,81,0	0/0:6,0:6:18.05:0,18,403	0/0:24,0:24:60.05:0,60,1593	0/0:19,0:19:51.13:0,51,1279	0/0:14,0:14:39.13:0,39,1175	0/0:23,0:23:69.24:0,69,2085	0/0:30,0:30:90.30:0,90,2577	0/0:33,0:33:90.29:0,90,2422	0/0:22,0:22:63.22:0,63,1856	0/0:19,0:19:54.19:0,54,1627	0/0:15,0:15:45.15:0,45,1282	0/0:23,0:23:63.02:0,63,1889	0/0:23,0:23:69.24:0,69,2005	0/0:18,0:18:54.17:0,54,1495	0/0:14,0:14:42.13:0,42,1198	0/0:15,0:15:45.15:0,45,1363	0/0:30,0:30:90.31:0,90,2707	1/1:3,3:7:12.04:555,12,0	0/0:14,0:14:42.14:0,42,1258	0/0:16,0:16:45.15:0,45,1311	0/0:38,0:38:99:0,111,3222	0/0:13,0:13:33.11:0,33,961	0/0:15,0:15:42.14:0,42,1156	0/0:23,0:23:57.20:0,57,1616	0/0:25,0:25:72.25:0,72,2058	0/0:27,0:27:78.27:0,78,2167	0/0:26,0:26:75.26:0,75,2065	0/0:5,0:5:15.05:0,15,454
chr10	97486720	.	GAC	G	254.59	PASS	AB=0.888;AC=18;AF=0.409;AN=44;BaseQRankSum=3.853;DP=281;FS=18.383;HRun=0;HaplotypeScore=39.2575;InbreedingCoeff=-0.3657;MQ=62.23;MQ0=11;MQRankSum=0.520;QD=1.69;ReadPosRankSum=2.218;VQSLOD=-0.1586;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:2.84:14,3,0	./.	./.	./.	0/0:6,0:6:6.02:0,6,89	0/0:11,0:11:5.38:0,5,49	0/1:18,2:19:49.78:50,0,98	0/0:12,0:12:6.84:0,7,44	0/1:8,3:11:17.35:17,0,162	1/1:4,0:4:2.60:10,3,0	./.	0/1:7,1:8:20.42:20,0,60	0/1:4,1:5:17.93:26,0,18	0/1:13,1:14:22.94:23,0,60	0/0:9,0:8:3:0,3,25	0/1:9,0:9:23.41:23,0,42	0/1:17,0:18:33.50:34,0,217	./.	0/0:8,0:7:5.93:0,6,61	./.	0/0:23,0:22:0.90:0,1,163	0/1:6,1:7:20.67:21,0,101	0/1:5,1:6:20.37:20,0,121	0/1:18,0:18:73.11:73,0,198	0/1:7,0:7:11.03:11,0,79	1/1:12,0:10:2.80:14,3,0	0/1:1,1:2:26.37:26,0,38	0/0:2,0:2:0.89:0,1,2
chr10	97487432	.	C	CA	954.26	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.284;DP=587;FS=5.048;HRun=2;HaplotypeScore=58.5992;InbreedingCoeff=0.9969;MQ=82.92;MQ0=0;MQRankSum=-4.254;QD=28.92;ReadPosRankSum=1.668;VQSLOD=3.0511;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:54.18:773,54,0	0/0:9,0:9:27.08:0,27,335	0/0:12,0:12:36.08:0,36,406	0/0:23,0:23:53.34:0,53,621	0/0:27,0:27:78.17:0,78,962	0/0:23,0:23:69.19:0,69,830	0/0:28,0:28:81.25:0,81,1003	0/0:40,0:40:99:0,120,1457	0/0:15,0:15:39.12:0,39,483	0/0:21,0:21:60.17:0,60,720	0/0:18,0:18:54.16:0,54,655	0/0:22,0:22:66.21:0,66,818	0/0:27,0:27:78.23:0,78,953	0/0:20,0:20:57.18:0,57,706	0/0:27,0:27:75.20:0,75,893	0/0:15,0:15:45.14:0,45,558	0/0:32,0:32:93.28:0,93,1138	1/1:1,9:9:21.07:302,21,0	0/0:25,0:25:69.06:0,69,810	0/0:17,0:17:48.14:0,48,582	0/0:12,0:12:30.08:0,30,359	0/0:18,0:18:51.16:0,51,629	0/0:13,0:13:33.10:0,33,408	0/0:16,0:16:48.15:0,48,595	0/0:23,0:23:66.20:0,66,807	0/0:28,0:28:78.24:0,78,967	0/0:21,0:21:60.19:0,60,739	0/0:22,0:22:63.20:0,63,779
chr10	97487441	.	G	GA	843.26	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.725;DP=595;FS=3.508;HRun=3;HaplotypeScore=59.8483;InbreedingCoeff=0.9953;MQ=85.66;MQ0=0;MQRankSum=-3.856;QD=26.35;ReadPosRankSum=0.893;VQSLOD=2.8526;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,15:23:60.06:731,60,0	0/0:12,0:12:36.09:0,36,410	0/0:14,0:14:39.09:0,39,442	0/0:27,0:27:41.01:0,41,667	0/0:28,0:28:80.60:0,81,919	0/0:24,0:24:68.54:0,69,774	0/0:24,0:24:72.19:0,72,837	0/0:43,0:43:99:0,120,1393	0/0:13,0:13:39.12:0,39,467	0/0:21,0:21:54.12:0,54,618	0/0:18,0:18:47.98:0,48,550	0/0:25,0:25:75.20:0,75,867	0/0:23,0:23:63.19:0,63,753	0/0:21,0:21:63.07:0,63,718	0/0:27,0:27:78.21:0,78,911	0/0:14,0:14:39.12:0,39,463	0/0:34,0:34:96.21:0,96,1097	1/1:2,7:8:18.05:232,18,0	0/0:26,0:26:72.19:0,72,835	0/0:17,0:17:45.07:0,45,510	0/0:10,0:10:30.04:0,30,342	0/0:20,0:20:48.14:0,48,571	0/0:14,0:14:35.96:0,36,392	0/0:18,0:18:51.13:0,51,588	0/0:21,0:21:60.18:0,60,718	0/0:25,0:25:67.18:0,67,843	0/0:21,0:21:63.16:0,63,729	0/0:23,0:23:63.18:0,63,742
chr10	97487667	.	T	TC	852.98	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.831;DP=510;FS=23.529;HRun=5;HaplotypeScore=69.4927;InbreedingCoeff=0.9418;MQ=62.00;MQ0=23;MQRankSum=-2.370;QD=21.32;ReadPosRankSum=-0.354;VQSLOD=1.9097;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,16:23:37.73:631,38,0	0/0:5,0:5:9.02:0,9,96	0/0:25,0:12:26.39:0,26,246	0/0:40,0:14:13.88:0,14,148	0/0:13,0:13:30.06:0,30,320	0/0:21,0:21:59.87:0,60,616	0/0:21,0:17:48.08:0,48,503	0/0:31,0:29:63.03:0,63,659	0/0:22,0:22:60.01:0,60,620	0/0:10,0:10:18.03:0,18,193	0/0:13,0:13:39.09:0,39,413	0/0:12,0:11:33.08:0,33,354	0/0:15,0:13:36.08:0,36,379	0/0:13,0:10:24.06:0,24,258	0/0:13,0:12:30.07:0,30,322	0/0:8,0:8:18.04:0,18,193	0/0:16,0:16:40.34:0,40,422	1/1:3,12:15:20.71:342,21,0	0/0:14,0:9:24.06:0,24,257	0/0:20,0:20:57.07:0,57,588	0/0:44,0:43:99:0,120,1276	0/0:17,0:17:39.09:0,39,418	0/0:9,0:9:24.06:0,24,257	0/0:23,0:20:51.12:0,51,547	0/0:18,0:17:39.10:0,39,417	0/0:28,0:28:78.16:0,78,821	0/0:9,0:9:24.06:0,24,257	0/0:7,0:7:18.05:0,18,193
chr10	97487748	.	C	CCCT	464.34	PASS	AB=0.885;AC=3;AF=0.054;AN=56;BaseQRankSum=0.995;DP=554;FS=2.155;HRun=0;HaplotypeScore=70.7219;InbreedingCoeff=0.1203;MQ=42.37;MQ0=94;MQRankSum=-1.200;QD=5.88;ReadPosRankSum=1.822;VQSLOD=2.0832;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,20:31:2.38:536,0,2	0/0:10,0:7:12:0,12,171	0/0:8,0:2:6.02:0,6,79	0/0:16,0:5:11.62:0,12,126	0/0:12,0:12:16.93:0,17,400	0/0:21,0:17:29.43:0,29,429	0/0:29,0:20:24.55:0,25,329	0/0:25,0:5:3.01:0,3,43	0/0:14,0:10:15:0,15,174	0/0:30,0:20:30.10:0,30,429	0/0:12,0:7:15.04:0,15,200	0/0:16,0:12:18.51:0,19,240	0/0:14,0:7:15.05:0,15,212	0/1:20,0:14:3.71:4,0,312	0/1:17,0:10:12.34:12,0,194	0/0:11,0:7:12.04:0,12,171	0/0:22,0:18:44.47:0,44,566	0/0:12,0:12:19:0,19,253	0/0:33,0:12:18.06:0,18,257	0/0:12,0:8:21.07:0,21,300	0/0:40,0:28:42.47:0,42,636	0/0:18,0:16:30.10:0,30,429	0/0:14,0:8:16.55:0,17,175	0/0:25,0:19:24.07:0,24,340	0/0:19,0:15:26.11:0,26,335	0/0:34,0:22:26.38:0,26,587	0/0:11,0:8:18.06:0,18,248	0/0:16,0:12:12.03:0,12,156
chr10	97488238	.	T	TGA	3892.40	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.727;DP=1252;FS=15.845;HRun=0;HaplotypeScore=158.0103;InbreedingCoeff=1.0000;MQ=60.60;MQ0=12;MQRankSum=-2.276;QD=32.99;ReadPosRankSum=4.421;VQSLOD=4.1330;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,66:78:99:2563,135,0	0/0:13,0:13:39.10:0,39,552	0/0:49,0:30:77.20:0,77,1021	0/0:55,0:43:94.61:0,95,1399	0/0:29,0:29:84.25:0,84,1241	0/0:24,0:24:63.20:0,63,939	0/0:48,0:48:99:0,135,1862	0/0:55,0:55:99:0,162,2255	0/0:49,0:49:99:0,147,2183	0/0:59,0:59:99:0,163,2416	0/0:30,0:30:87.20:0,87,1197	0/0:52,0:52:99:0,153,2184	0/0:54,0:54:99:0,150,2178	0/0:50,0:49:99:0,138,1987	0/0:70,0:70:99:0,196,2859	0/0:44,0:44:99:0,132,1878	0/0:46,0:46:99:0,118,1689	1/1:0,40:36:69.24:1329,69,0	0/0:26,0:24:69.15:0,69,951	0/0:41,0:41:99:0,108,1562	0/0:90,0:90:99:0,233,3361	0/0:39,0:39:99:0,105,1415	0/0:31,0:31:87.24:0,87,1263	0/0:60,0:60:99:0,159,2364	0/0:21,0:21:57.15:0,57,799	0/0:49,0:49:99:0,141,2005	0/0:31,0:31:93.30:0,93,1398	0/0:19,0:19:54.18:0,54,819
chr10	97488327	.	G	GTGTA	3032.16	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.681;DP=1104;FS=10.160;HRun=0;HaplotypeScore=187.0440;InbreedingCoeff=0.9997;MQ=65.30;MQ0=2;MQRankSum=-0.646;QD=36.53;ReadPosRankSum=-0.206;VQSLOD=2.6794;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,23:57:89.31:2065,89,0	0/0:21,0:21:60.21:0,60,1010	0/0:43,0:33:50.37:0,50,531	0/0:43,0:36:51.56:0,52,844	0/0:35,0:35:99:0,102,1615	0/0:37,0:37:93.27:0,93,1512	0/0:36,0:36:81.22:0,81,1251	0/0:59,0:59:99:0,117,1714	0/0:39,0:39:96.25:0,96,1500	0/0:50,0:50:99:0,141,2268	0/0:39,0:39:96.28:0,96,1539	0/0:46,0:46:99:0,108,1788	0/0:41,0:41:93.29:0,93,1516	0/0:37,0:37:87.27:0,87,1405	0/0:58,0:58:99:0,138,2224	0/0:46,0:46:99:0,108,1609	0/0:34,0:34:66.17:0,66,1019	1/1:15,11:26:48.77:1088,49,0	0/0:22,0:22:36.09:0,36,570	0/0:39,0:39:81.24:0,81,1315	0/0:58,0:58:99:0,135,2230	0/0:39,0:39:87.23:0,87,1327	0/0:25,0:25:63.12:0,63,956	0/0:48,0:48:99:0,117,1864	0/0:32,0:32:78.24:0,78,1265	0/0:48,0:48:99:0,117,1881	0/0:31,0:30:78.05:0,78,1136	0/0:14,0:14:30.10:0,30,505
chr10	97496047	.	C	CT	1113.59	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.676;DP=628;FS=4.178;HRun=7;HaplotypeScore=62.1514;InbreedingCoeff=0.9988;MQ=80.08;MQ0=0;MQRankSum=-4.165;QD=24.21;ReadPosRankSum=1.355;VQSLOD=4.2277;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:78.16:909,78,0	0/0:9,0:9:27.04:0,27,261	0/0:24,0:23:48.05:0,48,455	0/0:14,0:14:34.28:0,34,313	0/0:27,0:27:78.11:0,78,747	0/0:22,0:22:63.10:0,63,608	0/0:20,0:20:57.06:0,57,539	0/0:42,0:42:99:0,105,1003	0/0:19,0:19:51.06:0,51,486	0/0:34,0:34:87.13:0,87,836	0/0:17,0:17:45.07:0,45,435	0/0:24,0:24:69.11:0,69,666	0/0:23,0:23:63.10:0,63,608	0/0:27,0:27:81.13:0,81,782	0/0:20,0:20:57.09:0,57,551	0/0:21,0:21:57.09:0,57,550	0/0:18,0:18:54.08:0,54,516	1/1:4,10:14:27.08:326,27,0	0/0:18,0:18:48.07:0,48,463	0/0:23,0:23:60.09:0,60,579	0/0:23,0:23:54.05:0,54,514	0/0:21,0:21:63.10:0,63,608	0/0:20,0:20:54.08:0,54,521	0/0:23,0:23:66.10:0,66,637	0/0:28,0:28:69.10:0,69,666	0/0:23,0:23:66.09:0,66,633	0/0:27,0:27:72.11:0,72,694	0/0:15,0:15:39.06:0,39,377
chr10	97496102	.	TTGG	T	940.58	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.600;DP=635;FS=2.615;HRun=0;HaplotypeScore=98.5506;InbreedingCoeff=0.9601;MQ=69.99;MQ0=3;MQRankSum=-8.505;QD=24.75;ReadPosRankSum=0.845;VQSLOD=3.5959;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:30:67.41:923,67,0	0/0:5,0:5:15.05:0,15,345	0/0:22,0:18:48.57:0,49,935	0/0:25,0:16:45.13:0,45,884	0/0:27,0:27:81.28:0,81,1840	0/0:22,0:22:66.21:0,66,1460	0/0:18,0:18:51.16:0,51,1099	0/0:31,0:31:93.30:0,93,2020	0/0:18,0:18:51.16:0,51,1102	0/0:26,0:26:75.26:0,75,1724	0/0:19,0:19:57.20:0,57,1307	0/0:29,0:29:87.29:0,87,1910	0/0:20,0:20:60.21:0,60,1337	0/0:28,0:28:84.26:0,84,1802	0/0:21,0:21:57.19:0,57,1264	0/0:26,0:26:75.24:0,75,1680	0/0:20,0:20:60.21:0,60,1361	1/1:4,4:8:9.03:132,9,0	0/0:18,0:18:54.16:0,54,1112	0/0:30,0:30:87.28:0,87,1908	0/0:26,0:26:78.27:0,78,1726	0/0:19,0:19:54.18:0,54,1198	0/0:23,0:23:69.22:0,69,1492	0/0:29,0:29:87.28:0,87,1930	0/0:22,0:22:66.23:0,66,1462	0/0:32,0:32:96.30:0,96,1980	0/0:33,0:32:96.33:0,96,2205	0/0:8,0:8:24.04:0,24,502
chr10	97496109	.	TG	T	165.82	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.601;DP=604;FS=2.611;HRun=1;HaplotypeScore=72.5108;InbreedingCoeff=0.9553;MQ=66.30;MQ0=3;MQRankSum=-8.466;QD=5.72;ReadPosRankSum=1.753;VQSLOD=0.8451;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:60.18:239,60,0	0/0:5,0:5:15.05:0,15,240	0/0:17,0:13:39.10:0,39,583	0/0:27,0:18:50.82:0,51,674	0/0:26,0:26:78.25:0,78,1223	0/0:22,0:22:66.23:0,66,1054	0/0:15,0:15:45.15:0,45,719	0/0:30,0:30:90.31:0,90,1432	0/0:16,0:16:48.16:0,48,767	0/0:26,0:26:78.27:0,78,1247	0/0:21,0:21:63.21:0,63,988	0/0:29,0:29:84.29:0,84,1343	0/0:21,0:21:63.21:0,63,1007	0/0:26,0:26:78.27:0,78,1237	0/0:19,0:19:57.19:0,57,904	0/0:24,0:24:72.25:0,72,1151	0/0:21,0:21:63.19:0,63,969	1/1:0,4:4:8.47:41,8,0	0/0:15,0:15:45.15:0,45,699	0/0:28,0:28:84.27:0,84,1320	0/0:29,0:29:87.30:0,87,1388	0/0:18,0:18:51.16:0,51,792	0/0:24,0:24:69.20:0,69,1041	0/0:30,0:30:90.29:0,90,1401	0/0:18,0:18:54.18:0,54,863	0/0:28,0:28:84.29:0,84,1343	0/0:33,0:32:99:0,99,1567	0/0:7,0:7:21.07:0,21,336
chr10	97496111	.	AGCCT	A	989.98	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.596;DP=607;FS=2.594;HRun=0;HaplotypeScore=106.7774;InbreedingCoeff=0.9590;MQ=63.95;MQ0=3;MQRankSum=-8.458;QD=34.14;ReadPosRankSum=1.957;VQSLOD=3.3130;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:69.22:970,69,0	0/0:5,0:5:15.05:0,15,435	0/0:15,0:11:33.11:0,33,846	0/0:26,0:17:47.75:0,48,1225	0/0:26,0:26:78.27:0,78,2134	0/0:23,0:23:69.24:0,69,1950	0/0:15,0:15:45.15:0,45,1303	0/0:32,0:32:96.32:0,96,2591	0/0:16,0:16:48.16:0,48,1391	0/0:28,0:28:84.28:0,84,2340	0/0:21,0:21:63.22:0,63,1815	0/0:29,0:29:87.30:0,87,2511	0/0:21,0:21:63.22:0,63,1780	0/0:26,0:26:78.27:0,78,2222	0/0:19,0:19:57.20:0,57,1607	0/0:25,0:25:75.26:0,75,2140	0/0:21,0:21:63.22:0,63,1767	1/1:0,4:4:9.03:134,9,0	0/0:14,0:14:42.14:0,42,1217	0/0:30,0:30:90.31:0,90,2597	0/0:29,0:29:84.29:0,84,2433	0/0:17,0:17:48.16:0,48,1339	0/0:24,0:24:72.25:0,72,2075	0/0:30,0:30:90.31:0,90,2608	0/0:18,0:18:54.16:0,54,1442	0/0:29,0:29:87.30:0,87,2450	0/0:32,0:31:96.33:0,96,2717	0/0:7,0:7:21.07:0,21,608
chr10	97497079	.	A	AGTATTTTGTACATATGGAGGT	3361.61	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.591;DP=690;FS=6.991;HRun=0;HaplotypeScore=361.1474;InbreedingCoeff=0.9898;MQ=83.18;MQ0=0;MQRankSum=-6.729;QD=86.20;ReadPosRankSum=-3.340;VQSLOD=1.7946;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,2:32:42.03:1493,42,0	0/0:16,0:16:48.16:0,48,2586	0/0:19,0:19:41.29:0,41,2192	0/0:23,0:23:56.34:0,56,2312	0/0:28,0:28:81.24:0,81,3913	0/0:27,0:27:78.27:0,78,4017	0/0:29,0:29:78.22:0,78,3397	0/0:27,0:27:56.88:0,57,2580	0/0:28,0:28:84.27:0,84,4581	0/0:32,0:32:93.32:0,93,4917	0/0:16,0:16:45.15:0,45,2397	0/0:26,0:26:78.23:0,78,3705	0/0:23,0:23:60.19:0,60,3008	0/0:21,0:21:63.22:0,63,3271	0/0:26,0:26:69.24:0,69,3907	0/0:30,0:30:87.29:0,87,4676	0/0:26,0:25:78.26:0,78,4010	1/1:7,0:7:21.07:1869,21,0	0/0:20,0:20:60.15:0,60,2547	0/0:29,0:29:78.24:0,78,3862	0/0:31,0:31:90.28:0,90,3952	0/0:38,0:38:99:0,105,5616	0/0:18,0:18:48.16:0,48,2688	0/0:24,0:24:72.17:0,72,3601	0/0:22,0:22:66.23:0,66,3597	0/0:30,0:30:84.27:0,84,4138	0/0:37,0:37:99:0,108,5693	0/0:5,0:5:15.05:0,15,823
chr10	97497693	.	TC	T	125.34	PASS	AB=0.652;AC=2;AF=0.036;AN=56;BaseQRankSum=4.417;DP=348;FS=1.513;HRun=1;HaplotypeScore=32.7140;InbreedingCoeff=-0.0486;MQ=62.53;MQ0=5;MQRankSum=-4.413;QD=9.64;ReadPosRankSum=1.694;VQSLOD=1.3986;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:3,4:7:99:144,0,122	0/0:6,0:6:18.06:0,18,285	0/0:5,0:4:9:0,9,144	0/0:8,0:5:9.03:0,9,125	0/0:20,0:20:60.20:0,60,957	0/0:19,0:19:54.18:0,54,862	0/0:7,0:7:18.04:0,18,263	0/0:33,0:32:96.28:0,96,1475	0/0:7,0:7:21.07:0,21,336	0/0:19,0:19:57.19:0,57,892	0/0:13,0:13:39.13:0,39,623	0/0:11,0:11:33.11:0,33,525	0/0:14,0:14:42.14:0,42,664	0/0:9,0:9:24.05:0,24,350	0/0:12,0:12:36.12:0,36,569	0/0:10,0:10:30.10:0,30,477	0/0:23,0:23:66.70:0,67,1055	0/1:3,3:5:69.96:70,0,84	0/0:16,0:15:42.14:0,42,671	0/0:15,0:15:45.15:0,45,703	0/0:4,0:4:12.04:0,12,192	0/0:5,0:5:15.04:0,15,216	0/0:7,0:7:21.06:0,21,308	0/0:8,0:8:15.19:0,15,323	0/0:22,0:22:66.22:0,66,1050	0/0:20,0:20:60.19:0,60,935	0/0:19,0:19:54.17:0,54,837	0/0:3,0:3:6.02:0,6,92
chr10	97498559	.	G	GCACA	2790.30	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.168;DP=666;FS=8.670;HRun=0;HaplotypeScore=111.8963;InbreedingCoeff=0.9987;MQ=76.80;MQ0=0;MQRankSum=-4.250;QD=42.93;ReadPosRankSum=-0.456;VQSLOD=3.9285;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,25:44:68.73:1687,69,0	0/0:10,0:10:27.09:0,27,477	0/0:22,0:22:48.12:0,48,791	0/0:24,0:24:57.14:0,57,926	0/0:23,0:23:63.22:0,63,1108	0/0:27,0:27:75.24:0,75,1290	0/0:22,0:22:45.15:0,45,795	0/0:23,0:23:54.18:0,54,946	0/0:28,0:28:81.26:0,81,1403	0/0:29,0:29:81.28:0,81,1430	0/0:20,0:20:57.20:0,57,1001	0/0:24,0:24:66.18:0,66,1072	0/0:24,0:24:60.19:0,60,1027	0/0:29,0:29:84.27:0,84,1456	0/0:17,0:17:48.15:0,48,816	0/0:30,0:30:81.26:0,81,1403	0/0:28,0:28:69.24:0,69,1219	1/1:5,15:21:48.16:1225,48,0	0/0:15,0:15:27.09:0,27,475	0/0:23,0:23:63.20:0,63,1080	0/0:40,0:40:99:0,102,1802	0/0:15,0:15:36.11:0,36,592	0/0:19,0:19:48.16:0,48,848	0/0:27,0:26:57.19:0,57,1007	0/0:22,0:22:63.20:0,63,1085	0/0:25,0:25:63.19:0,63,1035	0/0:24,0:23:66.21:0,66,1125	0/0:11,0:11:33.11:0,33,583
chr10	97499500	.	T	TG	39.09	PASS	AB=0.750;AC=1;AF=0.018;AN=56;BaseQRankSum=3.222;DP=551;FS=1.851;HRun=1;HaplotypeScore=61.2657;InbreedingCoeff=-0.0220;MQ=74.75;MQ0=2;MQRankSum=-2.666;QD=4.34;ReadPosRankSum=-1.927;VQSLOD=-0.3236;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,5:19:29.76:0,30,239	0/0:8,0:8:24.08:0,24,332	0/0:33,0:26:77.25:0,77,985	0/0:26,0:24:54.95:0,55,729	0/0:16,0:16:45.15:0,45,627	0/0:20,0:20:60.20:0,60,829	0/0:34,0:34:99:0,102,1395	0/0:19,0:19:54.13:0,54,729	0/0:20,0:20:60.20:0,60,835	0/0:14,0:14:42.05:0,42,549	0/0:21,0:21:63.20:0,63,858	0/0:18,1:19:6.87:0,7,666	0/0:21,0:21:63.21:0,63,878	0/0:14,0:14:42.11:0,42,551	0/0:27,0:27:75.25:0,75,1041	0/0:19,0:19:57.12:0,57,754	0/0:25,0:25:72.24:0,72,1003	0/1:6,3:9:65.16:114,0,65	0/0:5,0:5:15.05:0,15,207	0/0:20,0:20:60.19:0,60,818	0/0:22,0:22:63.21:0,63,874	0/0:17,0:17:48.16:0,48,662	0/0:18,0:18:54.18:0,54,749	0/0:27,1:28:36.35:0,36,1078	0/0:13,0:13:39.13:0,39,541	0/0:31,0:31:93.26:0,93,1257	0/0:20,0:20:57.18:0,57,778	0/0:12,0:12:36.12:0,36,498
chr10	97499526	.	AG	A	393.01	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.564;DP=512;FS=1.017;HRun=5;HaplotypeScore=54.4335;InbreedingCoeff=0.9651;MQ=69.71;MQ0=9;MQRankSum=-4.289;QD=18.71;ReadPosRankSum=-1.132;VQSLOD=2.8431;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:15:33.09:374,33,0	0/0:7,0:7:15.03:0,15,188	0/0:42,0:16:35.20:0,35,340	0/0:44,1:26:27.81:0,28,365	0/0:10,0:10:27.09:0,27,369	0/0:18,0:18:54.16:0,54,707	0/0:27,0:27:72.24:0,72,984	0/0:17,0:17:36.12:0,36,490	0/0:24,0:24:68.96:0,69,898	0/0:14,0:14:30.10:0,30,410	0/0:15,0:15:45.15:0,45,609	0/0:18,0:18:54.17:0,54,721	0/0:22,0:22:60.20:0,60,818	0/0:14,0:14:39.12:0,39,516	0/0:23,0:23:66.20:0,66,878	0/0:18,0:18:48.14:0,48,626	0/0:23,0:23:66.22:0,66,890	1/1:1,4:5:12.03:136,12,0	0/0:12,0:11:28.41:0,28,404	0/0:13,0:13:30.10:0,30,407	0/0:24,0:24:63.15:0,63,812	0/0:12,0:12:32.94:0,33,424	0/0:13,0:13:32.82:0,33,401	0/0:20,0:20:57.17:0,57,761	0/0:13,0:13:30.10:0,30,410	0/0:21,0:20:57.18:0,57,764	0/0:19,0:19:57.18:0,57,759	0/0:7,0:7:15.05:0,15,205
chr10	97500595	.	CGT	C	1323.92	PASS	AB=0.953;AC=19;AF=0.352;AN=54;BaseQRankSum=5.404;DP=685;FS=11.826;HRun=0;HaplotypeScore=97.8434;InbreedingCoeff=0.0711;MQ=68.54;MQ0=17;MQRankSum=0.973;QD=3.29;ReadPosRankSum=0.221;VQSLOD=1.4696;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:36:54.57:66,0,55	0/1:12,1:13:23.51:24,0,138	./.	0/0:28,0:21:2.22:0,2,7	0/0:20,0:20:24.05:0,24,309	0/0:21,0:20:24.08:0,24,355	0/0:22,0:19:21.03:0,21,293	0/1:26,3:26:19.10:19,0,150	0/0:29,0:28:38.33:0,38,528	0/0:33,0:32:38.11:0,38,509	0/0:8,0:7:9.02:0,9,103	0/1:19,0:18:6.72:7,0,334	0/1:19,1:18:4.12:4,0,356	0/1:19,1:22:40:40,0,353	0/1:31,1:27:54.33:54,0,519	0/1:25,1:26:25.84:26,0,485	0/0:31,0:30:48.14:0,48,694	0/1:18,0:18:5.55:6,0,31	1/1:14,4:15:5.95:58,6,0	1/1:13,0:15:15.77:108,16,0	1/1:45,11:55:58.46:616,58,0	0/0:30,0:27:23.96:0,24,289	0/0:12,0:12:12.02:0,12,154	0/1:48,4:50:99:140,0,959	0/0:14,0:13:18.02:0,18,247	0/1:28,3:30:50.24:189,0,50	1/1:6,7:11:12.03:137,12,0	0/0:5,0:5:2.99:0,3,23
chr10	97500633	.	TGTGA	T	123.28	PASS	AB=0.929;AC=5;AF=0.096;AN=52;BaseQRankSum=6.976;DP=814;FS=11.755;HRun=0;HaplotypeScore=145.6547;InbreedingCoeff=0.7065;MQ=43.89;MQ0=109;MQRankSum=-2.862;QD=2.13;ReadPosRankSum=-0.848;VQSLOD=1.2985;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:36,3:36:4.76:15,0,5	0/0:16,0:13:8.04:0,8,322	./.	./.	0/0:17,0:13:25.62:0,26,545	0/0:29,0:22:25.99:0,26,700	0/0:32,0:17:23.72:0,24,475	0/0:42,0:27:75.13:0,75,1154	0/0:33,0:28:53.94:0,54,1067	0/0:40,0:21:50.28:0,50,1000	0/0:6,0:5:11.40:0,11,231	0/0:29,0:23:38.73:0,39,729	0/0:28,0:22:56.61:0,57,1145	0/0:35,0:29:66.58:0,67,1070	0/0:46,0:33:75.07:0,75,1346	0/0:28,0:26:51.04:0,51,987	0/0:48,0:40:89.32:0,89,2122	1/1:10,4:14:18.13:207,18,0	0/0:18,0:10:22.95:0,23,234	0/0:17,0:16:22.85:0,23,405	0/0:97,0:71:51.81:0,52,1662	0/0:31,0:24:40.86:0,41,658	0/0:21,0:17:29.40:0,29,517	0/0:52,0:46:99:0,111,2513	0/0:28,0:19:26.07:0,26,728	0/0:35,0:25:17.21:0,17,948	0/0:23,0:15:29.77:0,30,598	1/1:5,0:3:2.60:10,3,0
chr10	97500669	.	TGA	T	156.53	PASS	AB=0.846;AC=4;AF=0.071;AN=56;BaseQRankSum=9.168;DP=877;FS=13.050;HRun=0;HaplotypeScore=121.3359;InbreedingCoeff=0.3848;MQ=47.70;MQ0=94;MQRankSum=-0.272;QD=2.61;ReadPosRankSum=-0.956;VQSLOD=1.0617;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,16:33:7.39:51,0,7	0/0:14,0:12:19.69:0,20,308	0/0:32,0:4:2.04:0,2,6	0/0:45,0:9:11.78:0,12,138	0/0:24,0:20:45.85:0,46,868	0/0:27,1:22:34.99:0,35,791	0/0:46,0:32:55.59:0,56,1054	0/0:39,0:25:56.79:0,57,759	0/0:37,0:33:50.51:0,51,916	0/0:42,0:25:58.66:0,59,1082	0/1:12,0:12:2.15:2,0,336	0/0:30,0:26:35.99:0,36,832	0/0:26,0:24:62.15:0,62,876	0/0:34,0:30:43.76:0,44,1222	0/0:40,0:30:43.77:0,44,1028	0/0:28,0:26:62.41:0,62,989	0/0:43,1:39:1.51:0,2,1134	1/1:8,4:11:3.92:197,4,0	0/0:11,0:6:14.95:0,15,179	0/0:13,0:12:36.11:0,36,658	0/0:78,0:59:93.56:0,94,1534	0/0:33,0:27:46.25:0,46,930	0/0:21,0:17:44.78:0,45,613	0/0:50,0:46:72.70:0,73,1592	0/0:25,0:20:51.14:0,51,882	0/0:32,0:27:61.69:0,62,973	0/0:31,0:27:56.23:0,56,960	0/0:14,0:12:33.11:0,33,561
chr10	97500671	.	AGT	A	175.91	PASS	AB=0.944;AC=11;AF=0.196;AN=56;BaseQRankSum=5.060;DP=874;FS=9.969;HRun=0;HaplotypeScore=119.8932;InbreedingCoeff=-0.0219;MQ=48.01;MQ0=90;MQRankSum=0.400;QD=0.52;ReadPosRankSum=0.705;VQSLOD=1.7764;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:34:16.36:17,0,16	0/0:13,0:11:14.91:0,15,238	0/0:32,0:4:3.21:0,3,12	0/0:49,0:9:9.97:0,10,118	0/0:20,1:19:12.61:0,13,640	0/0:28,0:22:42.13:0,42,644	0/0:46,1:34:28.12:0,28,887	0/1:36,2:25:34.81:35,0,417	0/1:33,5:34:10.94:11,0,735	0/1:38,2:25:1.88:2,0,910	0/1:11,1:12:32.12:32,0,292	0/1:28,2:27:24.94:25,0,737	0/0:26,0:24:45.57:0,46,656	0/0:34,0:31:36.80:0,37,1030	0/1:38,1:29:7.88:8,0,837	0/0:29,0:27:57.19:0,57,894	0/1:38,4:39:92.94:93,0,922	1/1:12,0:11:11.50:85,11,0	0/0:11,0:6:6.02:0,6,95	0/0:14,0:13:36.11:0,36,544	0/0:75,0:57:56.23:0,56,1262	0/0:33,1:28:21.65:0,22,802	0/0:20,0:17:33.11:0,33,515	0/1:49,1:46:12.15:12,0,1193	0/0:26,0:21:54.17:0,54,828	0/0:30,0:26:18.68:0,19,758	0/0:30,0:26:55.99:0,56,824	0/0:14,0:12:33.11:0,33,522
chr10	97500894	.	T	TGCCGGGGATCGGACCTCA	8755.50	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.620;DP=693;FS=2.097;HRun=0;HaplotypeScore=320.4205;InbreedingCoeff=0.9992;MQ=83.17;MQ0=0;MQRankSum=-10.284;QD=165.20;ReadPosRankSum=1.464;VQSLOD=4.6103;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:27,10:39:84.29:6309,84,0	0/0:16,0:16:45.14:0,45,2105	0/0:17,0:17:47.73:0,48,1842	0/0:24,0:24:59.81:0,60,1922	0/0:24,0:24:66.21:0,66,3033	0/0:27,0:27:78.27:0,78,3913	0/0:37,0:37:99:0,102,5043	0/0:30,0:30:78.26:0,78,3499	0/0:31,0:31:90.31:0,90,4361	0/0:30,0:30:84.29:0,84,3980	0/0:14,0:14:42.13:0,42,1836	0/0:31,0:31:87.30:0,87,4092	0/0:28,0:28:84.29:0,84,4157	0/0:36,0:36:99:0,99,4783	0/0:24,0:24:69.24:0,69,3266	0/0:21,0:21:60.21:0,60,2992	0/0:32,0:32:84.29:0,84,3949	1/1:10,3:14:30.10:2446,30,0	0/0:16,0:16:45.11:0,45,1586	0/0:29,0:28:81.28:0,81,3602	0/0:34,0:34:99:0,99,4800	0/0:23,0:23:63.20:0,63,2955	0/0:19,0:19:57.20:0,57,2585	0/0:27,0:27:78.23:0,78,3003	0/0:14,0:14:42.14:0,42,2099	0/0:26,0:26:72.23:0,72,3252	0/0:20,0:20:54.17:0,54,2403	0/0:10,0:10:27.09:0,27,1280
chr10	97501344	.	T	TCTTG	2674.97	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.243;DP=784;FS=2.140;HRun=0;HaplotypeScore=131.9478;InbreedingCoeff=0.9902;MQ=67.86;MQ0=1;MQRankSum=-3.792;QD=43.85;ReadPosRankSum=2.906;VQSLOD=4.1974;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,32:40:75.26:1828,75,0	0/0:10,0:10:24.07:0,24,380	0/0:30,0:30:40.29:0,40,530	0/0:38,0:35:59.89:0,60,865	0/0:25,0:25:63.18:0,63,987	0/0:22,0:22:57.14:0,57,892	0/0:26,0:26:57.18:0,57,923	0/0:23,0:23:27.08:0,27,429	0/0:37,0:37:87.25:0,87,1420	0/0:28,0:28:69.19:0,69,1027	0/0:34,0:34:75.17:0,75,1154	0/0:39,0:39:99:0,99,1513	0/0:35,0:35:87.25:0,87,1382	0/0:31,0:31:78.22:0,78,1220	0/0:29,0:29:81.22:0,81,1287	0/0:36,0:36:90.27:0,90,1437	0/0:25,0:25:51.17:0,51,860	1/1:6,15:21:39.13:968,39,0	0/0:27,0:27:54.14:0,54,812	0/0:22,0:22:66.18:0,66,1036	0/0:37,0:37:90.23:0,90,1402	0/0:27,0:27:63.17:0,63,978	0/0:24,0:24:54.16:0,54,860	0/0:40,0:40:84.27:0,84,1387	0/0:19,0:19:48.16:0,48,808	0/0:27,0:27:75.23:0,75,1181	0/0:27,0:27:66.20:0,66,1060	0/0:5,0:5:14.99:0,15,170
chr10	97502584	.	C	CCACA	844.48	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.892;DP=984;FS=3.673;HRun=0;HaplotypeScore=175.9705;InbreedingCoeff=0.8827;MQ=56.48;MQ0=20;MQRankSum=-2.976;QD=16.89;ReadPosRankSum=-1.314;VQSLOD=2.9467;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,6:24:2.06:48,2,0	0/0:15,0:15:45.10:0,45,700	0/0:48,0:26:34.78:0,35,689	0/0:51,0:27:37.11:0,37,623	0/0:24,0:24:51.17:0,51,860	0/0:19,0:19:45.11:0,45,670	0/0:25,0:26:51.15:0,51,792	0/0:47,0:44:98.09:0,98,1463	0/0:49,0:50:99:0,99,1875	0/0:49,0:47:99:0,129,2158	0/0:26,0:26:58.35:0,58,1052	0/0:48,0:48:99:0,123,1995	0/0:48,0:48:99:0,120,2022	0/0:49,0:50:99:0,107,2038	0/0:50,0:50:99:0,138,2263	0/0:47,0:49:99:0,123,1968	0/0:35,0:36:72.23:0,72,1179	1/1:14,7:21:42.72:905,43,0	0/0:31,0:24:36.11:0,36,579	0/0:13,0:15:23.65:0,24,350	0/0:59,0:60:99:0,138,2199	0/0:25,0:26:54:0,54,819	0/0:29,0:29:67:0,67,1084	0/0:38,0:38:32.33:0,32,1276	0/0:27,0:27:66.18:0,66,1054	0/0:26,0:26:20.93:0,21,999	0/0:30,0:28:67.55:0,68,1231	0/0:13,0:13:30.10:0,30,473
chr10	97502878	.	T	TAC	2013.43	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.823;DP=862;FS=18.071;HRun=0;HaplotypeScore=149.7291;InbreedingCoeff=0.8442;MQ=50.12;MQ0=50;MQRankSum=-0.076;QD=25.81;ReadPosRankSum=0.996;VQSLOD=3.6320;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:26,14:37:65.88:974,66,0	0/0:14,0:12:27.01:0,27,340	0/0:31,0:5:8.98:0,9,97	0/0:31,0:10:12.04:0,12,156	0/0:31,0:29:63.19:0,63,804	0/0:27,0:24:41.32:0,41,423	0/0:22,0:18:32.97:0,33,404	0/0:56,0:51:99:0,105,1294	0/0:27,0:27:59.66:0,60,721	0/0:35,0:32:67.08:0,67,818	0/0:26,0:26:42.47:0,42,505	0/0:30,0:30:57.61:0,58,709	0/0:19,0:18:39.12:0,39,490	0/0:32,0:31:31.42:0,31,678	0/0:32,0:31:83.87:0,84,996	0/0:43,0:43:93.24:0,93,1136	0/0:26,0:26:48.38:0,48,589	1/1:34,4:37:82.98:1161,83,0	0/0:21,0:15:4.10:0,4,367	0/0:27,0:25:23.56:0,24,536	0/0:62,0:55:75.54:0,76,946	0/0:28,0:28:42.13:0,42,539	0/0:26,0:26:47.84:0,48,588	0/0:26,0:23:48.61:0,49,608	0/0:31,0:28:69.15:0,69,833	0/0:45,0:40:99:0,105,1280	0/0:25,0:25:38.16:0,38,453	0/0:11,0:9:5.83:0,6,112
chr10	97502892	.	TACAC	T	1019.20	PASS	AB=0.939;AC=13;AF=0.250;AN=52;BaseQRankSum=2.967;DP=834;FS=8.694;HRun=0;HaplotypeScore=179.6845;InbreedingCoeff=0.0952;MQ=48.91;MQ0=49;MQRankSum=-1.295;QD=2.74;ReadPosRankSum=-0.678;VQSLOD=1.9736;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:44:36.40:36,0,74	0/1:16,0:14:2.01:2,0,105	./.	./.	0/0:32,0:30:24.90:0,25,341	0/0:26,0:23:23.50:0,24,299	0/0:23,0:19:13.29:0,13,125	0/0:51,0:46:11.70:0,12,72	0/0:23,0:24:16.21:0,16,228	0/0:25,0:24:14.02:0,14,170	0/1:23,0:22:17.60:18,0,115	0/0:31,0:30:30.49:0,30,433	0/0:14,0:13:14.81:0,15,196	0/0:32,0:33:34.15:0,34,309	0/1:33,3:36:24.48:24,0,430	0/0:30,0:35:23.51:0,24,310	0/1:26,1:28:38.13:38,0,297	0/1:37,0:36:31.44:191,0,31	0/0:24,0:18:0:0,0,0	0/1:23,4:25:3.64:91,0,4	0/1:58,1:50:15.19:196,0,15	0/0:30,0:30:15.01:0,15,176	0/0:23,0:24:16.68:0,17,181	0/1:26,1:23:31.26:31,0,107	0/0:33,0:32:10.46:0,10,240	1/1:41,2:40:5.66:234,6,0	1/1:13,11:24:18.81:307,19,0	0/0:12,0:10:6.91:0,7,85
chr10	97504876	.	G	GC	1502.23	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-7.401;DP=559;FS=3.588;HRun=5;HaplotypeScore=54.9022;InbreedingCoeff=0.8406;MQ=79.38;MQ0=0;MQRankSum=1.021;QD=22.76;ReadPosRankSum=2.320;VQSLOD=2.7239;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:30:69.22:883,69,0	0/0:15,0:15:42.01:0,42,410	0/0:17,0:17:8.72:0,9,250	0/1:13,0:13:0.29:0,0,72	0/0:27,0:27:81.14:0,81,846	0/0:23,0:23:60.12:0,60,627	0/0:14,0:14:39.06:0,39,397	0/0:30,0:30:80.80:0,81,781	0/0:24,0:24:60.09:0,60,622	0/0:28,0:28:81.16:0,81,840	0/0:16,0:16:48.12:0,48,513	0/0:8,0:8:18.03:0,18,185	0/0:12,0:12:36.09:0,36,385	0/0:6,0:6:15.01:0,15,151	0/0:30,0:30:87.20:0,87,925	0/0:17,0:17:44.12:0,44,447	0/0:26,0:27:77.21:0,77,799	1/1:1,22:23:57.19:740,57,0	0/0:11,0:11:27.06:0,27,282	0/0:26,0:26:57.11:0,57,597	0/0:18,0:18:51.13:0,51,547	0/0:23,0:23:69.13:0,69,715	0/0:29,0:29:78.17:0,78,818	0/0:11,0:11:33.03:0,33,340	0/0:21,0:21:60.12:0,60,620	0/0:20,0:20:51.04:0,51,521	0/0:24,0:24:69.16:0,69,732	0/0:16,0:16:45.09:0,45,474
chr10	97507114	.	TA	T	73.89	PASS	AB=0.914;AC=9;AF=0.161;AN=56;BaseQRankSum=5.573;DP=651;FS=4.069;HRun=15;HaplotypeScore=85.9690;InbreedingCoeff=0.0559;MQ=65.35;MQ0=7;MQRankSum=-0.275;QD=0.43;ReadPosRankSum=1.247;VQSLOD=-0.6396;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:28:10.58:0,11,111	0/0:9,1:11:4.52:0,5,139	0/0:29,0:12:2.99:0,3,25	0/0:38,0:19:16.38:0,16,133	0/1:30,7:39:68.96:69,0,300	0/0:13,1:15:19.48:0,19,271	0/0:11,0:10:9.48:0,9,154	0/0:26,1:28:2.56:0,3,242	0/0:18,0:18:38.99:0,39,343	0/1:26,4:31:38.28:38,0,178	0/0:26,1:29:38.56:0,39,411	0/0:23,0:24:47.59:0,48,384	0/0:20,2:22:16.59:0,17,254	0/1:12,0:12:2.10:2,0,109	0/1:16,3:19:5.56:6,0,197	0/0:13,0:15:35.82:0,36,301	0/0:36,1:37:31.80:0,32,600	1/1:5,0:23:21.22:65,21,0	0/0:16,1:18:19.59:0,20,281	0/0:35,0:36:44.29:0,44,460	0/1:12,0:15:4.40:4,0,75	0/0:9,1:11:1.23:0,1,160	0/1:22,2:25:14.52:15,0,323	0/0:20,0:21:31.69:0,32,310	0/0:25,2:29:20.96:0,21,392	0/0:26,0:26:28.98:0,29,326	0/0:28,3:32:21.41:0,21,425	0/1:5,1:7:1.51:2,0,90
chr10	97507125	.	A	AAAG	585.20	PASS	AB=0.963;AC=3;AF=0.054;AN=56;BaseQRankSum=5.783;DP=672;FS=0.000;HRun=0;HaplotypeScore=107.6823;InbreedingCoeff=0.6214;MQ=62.43;MQ0=11;MQRankSum=-0.867;QD=8.87;ReadPosRankSum=1.456;VQSLOD=2.9219;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,30:40:36.92:659,37,0	0/0:11,0:11:32.87:0,33,324	0/0:25,0:6:11.93:0,12,98	0/0:45,0:19:21.16:0,21,163	0/0:34,0:34:87.55:0,88,896	0/0:16,0:16:44.43:0,44,505	0/0:12,0:11:29.23:0,29,313	0/0:27,0:26:58.10:0,58,569	0/0:18,0:18:54.05:0,54,645	0/0:30,0:30:64.88:0,65,643	0/0:36,0:36:89.53:0,90,929	0/0:25,0:25:65.84:0,66,745	0/0:22,0:22:58.31:0,58,586	0/0:13,0:13:35.72:0,36,340	0/0:16,0:16:40.99:0,41,411	0/0:14,0:14:35.94:0,36,457	0/0:40,0:39:99:0,104,1125	0/1:25,0:26:32.21:32,0,202	0/0:25,0:25:50.50:0,50,592	0/0:31,0:31:79.43:0,79,879	0/0:12,0:12:20.86:0,21,205	0/0:9,0:9:14.64:0,15,288	0/0:28,0:28:65.40:0,65,668	0/0:21,0:21:30.57:0,31,591	0/0:31,0:30:80.05:0,80,848	0/0:26,0:26:70.47:0,70,699	0/0:29,0:29:74.10:0,74,863	0/0:10,0:10:29.87:0,30,301
chr10	97508859	.	G	GCA	4512.16	PASS	AB=0.786;AC=32;AF=0.615;AN=52;BaseQRankSum=-4.148;DP=800;FS=0.670;HRun=0;HaplotypeScore=87.3755;InbreedingCoeff=-0.5998;MQ=55.26;MQ0=27;MQRankSum=-0.754;QD=6.56;ReadPosRankSum=1.289;VQSLOD=4.1524;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:43:4.85:139,0,5	0/1:10,4:13:30.28:164,0,30	./.	./.	1/1:23,0:29:6:52,6,0	0/1:13,5:20:34.71:77,0,35	0/1:28,6:34:62.81:75,0,63	0/1:31,0:30:18.86:89,0,19	0/1:17,6:23:58.33:157,0,58	0/1:19,10:29:48.77:354,0,49	0/1:8,4:13:20.12:122,0,20	0/1:14,11:25:52.43:241,0,52	1/1:5,8:14:3.91:209,4,0	0/1:15,6:21:79.76:116,0,80	0/1:30,8:37:77.06:157,0,77	0/1:20,12:30:5.98:295,0,6	0/1:9,15:26:2.54:350,0,3	0/1:17,0:17:2.10:21,0,2	0/1:18,0:17:45.90:55,0,46	1/1:14,6:20:12.04:179,12,0	0/1:40,16:55:90.88:113,0,91	0/1:13,8:21:20.59:122,0,21	1/1:14,5:20:7.27:210,7,0	1/1:20,19:40:3.82:439,4,0	0/1:7,4:12:8.13:39,0,8	0/1:29,11:36:7.91:267,0,8	1/1:17,12:30:30.10:430,30,0	0/1:8,5:12:26.61:39,0,27
chr10	97513662	.	GT	G	152.35	PASS	AB=1.000;AC=9;AF=0.173;AN=52;BaseQRankSum=3.253;DP=194;FS=0.000;HRun=1;HaplotypeScore=31.7550;InbreedingCoeff=0.1409;MQ=74.10;MQ0=0;MQRankSum=-2.075;QD=4.01;ReadPosRankSum=1.181;VQSLOD=0.0549;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:31.86:0,32,230	0/0:3,0:3:6:0,6,55	0/0:16,0:13:14.04:0,14,184	0/0:11,0:11:19.36:0,19,183	0/0:4,0:4:8.98:0,9,72	0/0:8,0:7:12.41:0,12,94	0/0:13,2:15:19.32:0,19,255	0/1:4,0:4:17.85:19,0,18	0/1:5,0:5:17.47:17,0,35	0/1:4,0:4:21.74:22,0,22	./.	0/0:6,0:6:15.02:0,15,103	0/0:2,0:2:2.98:0,3,22	1/1:1,0:1:1.25:3,1,0	0/1:4,0:4:4.07:4,0,21	0/1:6,0:5:17.27:21,0,17	0/0:11,0:11:23.93:0,24,218	1/1:12,2:14:13.20:193,13,0	0/0:9,0:9:18.18:0,18,148	0/0:5,0:5:11.99:0,12,100	0/0:12,0:12:20.35:0,20,159	0/0:7,0:7:7.06:0,7,64	0/0:2,0:2:2.99:0,3,24	0/0:13,0:13:16.81:0,17,112	./.	0/0:2,1:3:6:0,6,52	0/0:5,0:5:8.38:0,8,69	0/0:6,0:5:14.96:0,15,117
chr10	97514357	.	T	TCATC	1920.27	PASS	AB=0.857;AC=12;AF=0.240;AN=50;BaseQRankSum=-4.534;DP=703;FS=24.391;HRun=0;HaplotypeScore=125.2946;InbreedingCoeff=0.5110;MQ=53.39;MQ0=21;MQRankSum=1.588;QD=9.55;ReadPosRankSum=-1.726;VQSLOD=1.3348;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:21.06:0,21,305	0/0:9,0:9:2.88:0,3,46	./.	./.	0/0:13,0:12:3.01:0,3,46	0/0:21,0:21:18.05:0,18,256	0/0:24,0:24:27.07:0,27,391	0/0:35,0:25:3.01:0,3,41	0/0:30,0:29:36.10:0,36,525	0/0:26,0:26:15.05:0,15,224	./.	0/0:30,0:30:39.10:0,39,549	0/0:26,0:26:15.03:0,15,209	0/0:25,0:25:39.13:0,39,586	0/0:33,0:32:54.17:0,54,801	0/0:24,0:24:24.08:0,24,370	0/0:26,0:26:36.09:0,36,527	0/0:28,0:27:4.73:0,5,23	1/1:28,2:25:6.02:141,6,0	1/1:12,3:15:3.01:70,3,0	1/1:59,12:66:10.15:1063,10,0	0/0:19,0:19:12.04:0,12,181	1/1:12,0:12:0.47:1,0,0	0/1:31,0:31:25.87:26,0,779	0/0:18,0:18:12.04:0,12,182	1/1:10,5:17:18.06:366,18,0	0/1:15,10:25:68.44:397,0,68	0/0:14,0:13:24.05:0,24,345
chr10	97514470	.	T	TATCC	1584.31	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=0.925;DP=620;FS=18.040;HRun=0;HaplotypeScore=109.3081;InbreedingCoeff=0.5406;MQ=48.80;MQ0=39;MQRankSum=-1.128;QD=9.16;ReadPosRankSum=-0.717;VQSLOD=1.6837;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,2:17:4.73:68,5,0	0/0:9,0:9:3.01:0,3,46	./.	./.	0/0:7,0:7:6.02:0,6,90	0/0:20,0:20:8.75:0,9,137	0/0:24,0:22:26.57:0,27,379	0/0:26,0:19:2.97:0,3,20	0/0:29,0:25:29.60:0,30,446	0/0:23,0:20:9.02:0,9,120	0/0:7,0:6:2.99:0,3,23	0/0:29,0:29:45.15:0,45,688	0/0:24,0:24:15.05:0,15,221	0/0:16,0:16:7.07:0,7,322	0/0:20,0:19:24.08:0,24,368	0/0:20,0:20:2.18:0,2,296	1/1:26,4:31:29.10:411,29,0	0/0:25,0:23:17.93:0,18,249	1/1:12,0:11:3.01:58,3,0	1/1:10,0:10:0.81:2,1,0	1/1:74,9:77:7.30:920,7,0	0/0:17,0:16:2.93:0,3,46	0/0:11,0:10:2.79:0,3,45	0/0:38,0:38:31.01:0,31,603	0/0:8,0:8:3.01:0,3,46	0/0:13,0:13:5.74:0,6,37	1/1:11,2:14:15.01:268,15,0	0/0:2,0:2:3.01:0,3,46
chr10	97514652	.	T	TCCAC	352.71	PASS	AB=0.975;AC=19;AF=0.352;AN=54;BaseQRankSum=2.890;DP=282;FS=53.760;HRun=0;HaplotypeScore=96.0316;InbreedingCoeff=-0.3044;MQ=33.86;MQ0=10;MQRankSum=-1.487;QD=1.91;ReadPosRankSum=0.186;VQSLOD=-0.6410;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:9:2.30:2,0,119	0/1:3,0:3:9.06:13,0,9	0/1:13,0:3:14.30:14,0,40	./.	1/1:11,0:11:0.47:1,0,0	0/0:7,0:6:5.92:0,6,39	0/1:12,0:10:28.97:29,0,117	0/1:15,0:9:25.98:26,0,70	0/1:11,0:12:25.54:26,0,119	0/0:10,0:10:3.30:0,3,84	0/0:5,0:4:2.95:0,3,46	0/0:9,0:9:5.50:0,6,118	0/0:13,0:12:7.79:0,8,217	0/1:13,1:15:70.90:71,0,161	0/1:8,0:8:16.31:16,0,52	0/0:9,0:6:8.76:0,9,87	0/1:10,0:10:25.81:47,0,26	0/0:2,1:2:2.98:0,3,21	0/1:5,0:4:6.40:17,0,6	0/0:10,0:9:7.27:0,7,103	0/1:27,0:19:7.62:8,0,13	0/1:13,1:14:7.89:8,0,40	0/1:9,1:10:52.40:52,0,86	0/0:9,0:8:8.74:0,9,57	0/1:8,0:8:9.71:10,0,18	0/1:8,1:9:90.53:91,0,123	0/0:6,0:6:14.46:0,14,127	1/1:3,0:3:8.61:67,9,0
chr10	97514664	.	TCCAC	T	1807.02	PASS	AB=0.898;AC=25;AF=0.463;AN=54;BaseQRankSum=1.319;DP=396;FS=35.616;HRun=0;HaplotypeScore=104.2243;InbreedingCoeff=-0.4715;MQ=28.77;MQ0=39;MQRankSum=-3.006;QD=6.10;ReadPosRankSum=0.801;VQSLOD=0.2988;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,2:13:75.19:75,0,280	0/1:3,0:3:1.22:1,0,77	0/0:22,0:4:11.84:0,12,156	./.	1/1:19,2:19:2.29:32,2,0	1/1:9,2:9:3.48:53,3,0	0/1:14,4:16:58.55:59,0,478	0/1:19,2:15:1.95:2,0,320	0/1:12,2:13:99:234,0,126	0/1:10,4:13:99:207,0,248	0/0:3,2:4:2.98:0,3,77	0/1:8,1:9:86.80:87,0,204	0/1:11,4:14:75.36:75,0,336	0/1:19,1:20:99:256,0,303	0/1:10,0:9:99:117,0,110	1/1:9,3:9:17.99:227,18,0	0/1:9,2:11:89.17:96,0,89	0/0:3,0:2:3.01:0,3,78	0/1:11,3:8:67.36:67,0,289	0/1:13,2:13:10.75:11,0,145	0/0:33,6:25:13.45:0,13,219	0/1:18,1:18:15.77:16,0,87	0/1:14,1:14:21.02:21,0,177	0/1:9,0:8:99:116,0,125	0/1:8,1:9:34.30:34,0,95	0/1:10,1:10:52.68:53,0,412	0/1:9,1:10:99:120,0,128	0/0:3,0:3:8.51:0,9,73
chr10	97514677	.	CCACT	C	1658.93	PASS	AB=0.845;AC=19;AF=0.352;AN=54;BaseQRankSum=0.033;DP=505;FS=22.060;HRun=0;HaplotypeScore=123.7954;InbreedingCoeff=-0.4510;MQ=30.33;MQ0=72;MQRankSum=-1.849;QD=5.07;ReadPosRankSum=-1.658;VQSLOD=0.8214;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:14:92.99:93,0,174	0/0:5,0:4:2.96:0,3,56	0/0:22,0:4:11.97:0,12,156	./.	0/1:17,7:22:16.71:44,0,17	0/1:12,1:12:6.97:7,0,31	0/1:27,1:26:44.10:44,0,304	0/0:35,0:24:59.02:0,59,659	0/1:13,4:15:55.76:250,0,56	0/0:17,0:15:19.01:0,19,260	0/0:8,0:5:2.98:0,3,35	0/1:6,2:8:91.99:92,0,145	0/1:17,0:17:10.27:10,0,279	0/1:19,5:24:99:351,0,238	0/1:10,3:12:22.34:121,0,22	1/1:6,6:9:8.30:190,8,0	0/1:8,9:17:84.74:98,0,85	0/1:4,0:3:14.56:15,0,113	0/0:21,0:8:19.09:0,19,246	0/1:15,4:16:55.35:58,0,55	0/1:48,0:29:51.15:51,0,152	0/1:11,13:19:34.85:35,0,41	0/0:13,8:15:9.97:0,10,122	0/1:7,4:10:84.97:103,0,85	0/0:17,0:14:6.02:0,6,75	0/1:15,0:13:40.92:41,0,290	0/1:4,10:14:99:210,0,128	0/0:4,0:3:0.81:0,1,36
chr10	97514680	.	CTCAT	C	1312.86	PASS	AB=0.991;AC=22;AF=0.407;AN=54;BaseQRankSum=4.283;DP=515;FS=2.618;HRun=0;HaplotypeScore=124.1557;InbreedingCoeff=-0.4681;MQ=30.72;MQ0=76;MQRankSum=-1.534;QD=3.51;ReadPosRankSum=-1.398;VQSLOD=1.7678;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,4:14:74.53:145,0,75	0/1:5,0:4:29.96:31,0,30	0/0:21,0:4:11.92:0,12,97	./.	0/1:25,0:23:9.16:43,0,9	0/1:13,0:12:9.61:12,0,10	0/1:28,0:26:20.90:21,0,171	0/0:37,0:24:50.74:0,51,403	0/1:16,0:14:40.96:199,0,41	0/1:18,0:16:41.96:42,0,237	0/0:8,0:5:2.71:0,3,18	0/1:9,0:9:57.05:57,0,119	0/1:19,0:18:1.60:2,0,295	0/1:24,0:24:99:240,0,134	0/1:12,0:11:1.06:115,0,1	1/1:12,0:9:17.80:158,18,0	0/1:16,0:16:47.53:59,0,48	0/0:4,0:3:5.68:0,6,145	0/0:24,0:9:10.79:0,11,137	0/1:22,0:19:15.77:40,0,16	0/1:50,0:30:6.09:6,0,75	0/1:24,0:19:16.92:17,0,21	0/0:21,0:15:7.21:0,7,59	0/1:11,0:10:73.31:84,0,73	0/1:17,0:14:11.16:11,0,111	0/1:14,0:12:17.85:18,0,241	0/1:16,0:14:99:136,0,131	0/1:4,0:3:11.11:28,0,11
chr10	97514681	.	T	TCATC	1853.65	PASS	AB=1.000;AC=41;AF=0.854;AN=48;BaseQRankSum=-0.327;DP=525;FS=6.231;HRun=0;HaplotypeScore=131.1192;InbreedingCoeff=0.0203;MQ=31.22;MQ0=75;MQRankSum=-1.637;QD=3.95;ReadPosRankSum=-0.415;VQSLOD=1.9748;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:15:5.99:48,6,0	./.	./.	./.	1/1:26,0:24:6.41:61,6,0	1/1:13,0:12:1.25:3,1,0	0/1:29,0:27:12.46:87,0,12	1/1:37,0:25:2.97:20,3,0	1/1:16,0:14:0.73:95,1,0	1/1:14,5:18:18.06:393,18,0	0/1:8,0:5:0:0,0,0	0/1:9,0:9:0.44:83,0,0	0/1:20,0:19:8.03:8,0,28	1/1:24,0:24:27.19:206,27,0	1/1:12,0:11:9.26:81,9,0	1/1:12,0:9:10.14:66,10,0	0/1:16,0:16:29.60:61,0,30	0/1:5,0:4:20.32:20,0,76	1/1:25,0:10:1.25:3,1,0	1/1:22,0:19:9.48:97,9,0	1/1:51,0:31:6.76:50,7,0	1/1:24,0:19:3.01:39,3,0	0/1:21,0:15:0:0,0,0	1/1:11,0:10:8.91:63,9,0	1/1:9,8:15:6.02:140,6,0	1/1:9,5:12:12:230,12,0	1/1:16,0:14:14.83:108,15,0	./.
chr10	97516383	.	A	AT	148.97	PASS	AB=0.722;AC=1;AF=0.018;AN=56;BaseQRankSum=7.356;DP=581;FS=36.512;HRun=0;HaplotypeScore=159.5595;InbreedingCoeff=-0.0289;MQ=58.04;MQ0=4;MQRankSum=-6.445;QD=5.73;ReadPosRankSum=3.023;VQSLOD=1.8913;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,3:21:38.79:0,39,449	0/0:8,2:10:16.69:0,17,249	0/0:43,0:25:69.01:0,69,860	0/0:47,0:29:80.04:0,80,1047	0/0:11,9:23:24.58:0,25,262	0/0:9,1:11:25.59:0,26,313	0/0:24,0:25:50.98:0,51,704	0/0:15,0:15:45.15:0,45,629	0/0:17,3:19:42.09:0,42,573	0/1:16,8:26:99:223,0,447	0/0:4,3:11:2.98:0,3,43	0/0:16,4:24:39.52:0,40,540	0/0:11,2:17:31.66:0,32,403	0/0:17,2:20:40.78:0,41,548	0/0:15,3:17:39.09:0,39,511	0/0:14,3:17:33.63:0,34,515	0/0:15,1:15:42.04:0,42,546	0/0:18,0:18:54.14:0,54,731	0/0:9,0:9:27.09:0,27,374	0/0:15,0:23:42.90:0,43,418	0/0:21,0:21:48.12:0,48,648	0/0:7,6:19:19.79:0,20,257	0/0:17,1:21:38.93:0,39,407	0/0:24,0:26:57.17:0,57,794	0/0:14,4:28:22.18:0,22,292	0/0:25,0:28:70.93:0,71,974	0/0:12,0:13:36.12:0,36,493	0/0:5,0:11:6.17:0,6,175
chr10	97516395	.	C	CA	716.35	PASS	AB=0.913;AC=7;AF=0.125;AN=56;BaseQRankSum=11.300;DP=645;FS=103.612;HRun=2;HaplotypeScore=225.0070;InbreedingCoeff=-0.1690;MQ=46.27;MQ0=6;MQRankSum=-10.377;QD=3.96;ReadPosRankSum=2.227;VQSLOD=-0.0353;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:20.03:0,20,251	0/0:8,0:9:10.88:0,11,167	0/0:43,0:22:58.75:0,59,752	0/0:42,0:23:56.49:0,56,789	0/0:23,2:26:9.58:0,10,99	0/0:13,0:13:9.18:0,9,107	0/0:25,0:26:28.67:0,29,452	0/0:18,0:18:24.20:0,24,563	0/0:21,0:20:19.22:0,19,302	0/1:38,0:40:99:345,0,371	0/0:9,2:12:2.69:0,3,43	0/0:20,3:23:3.61:0,4,189	0/1:16,3:19:12.48:12,0,188	0/0:23,0:23:14.39:0,14,330	0/0:19,0:18:4.76:0,5,49	0/0:17,0:17:16.73:0,17,258	0/0:15,0:14:29.77:0,30,448	0/0:14,0:13:42.14:0,42,584	0/1:16,0:16:85.60:86,0,258	0/0:24,0:27:22.21:0,22,221	0/0:22,0:22:39.01:0,39,541	0/0:23,3:27:4.89:0,5,199	0/0:19,2:22:15.16:0,15,200	0/0:24,0:23:23.99:0,24,312	0/1:15,5:29:24.73:25,0,73	0/1:42,0:44:99:325,0,818	0/1:16,1:19:43.26:43,0,350	0/1:7,5:13:1.74:2,0,190
chr10	97516407	.	A	AAG	646.59	PASS	AB=0.919;AC=13;AF=0.232;AN=56;BaseQRankSum=10.303;DP=750;FS=61.629;HRun=0;HaplotypeScore=223.4656;InbreedingCoeff=-0.1523;MQ=38.89;MQ0=8;MQRankSum=-8.348;QD=2.20;ReadPosRankSum=5.048;VQSLOD=0.3673;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,3:25:7.28:10,0,7	0/1:12,2:14:5.06:5,0,183	0/0:42,0:17:35.48:0,35,608	0/0:37,0:17:39.85:0,40,562	0/0:25,7:32:2.24:0,2,26	0/1:13,1:14:2.12:2,0,65	0/0:25,1:26:17.56:0,18,224	0/1:20,0:20:56.83:57,0,401	0/0:21,4:24:12.35:0,12,295	0/1:41,7:47:99:434,0,665	0/0:13,3:16:0.98:0,1,32	0/0:27,7:33:9.50:0,9,194	0/1:19,3:22:0.93:1,0,234	0/1:23,5:28:23.88:24,0,99	1/1:17,4:20:1.68:41,2,0	0/1:15,4:19:78.84:79,0,160	0/0:16,1:16:12.58:0,13,227	0/0:14,0:12:38.38:0,38,464	0/0:25,0:26:22.73:0,23,394	0/0:34,0:34:12.29:0,12,162	0/0:22,0:22:23.82:0,24,308	0/0:34,7:41:11.16:0,11,214	0/0:28,1:29:5.60:0,6,119	0/0:24,0:23:14.09:0,14,225	0/0:32,4:36:12.13:0,12,137	0/1:50,1:51:99:103,0,1056	0/1:20,0:20:18.23:18,0,290	0/1:12,0:12:9.24:9,0,166
chr10	97516419	.	A	AAG	1073.84	PASS	AB=0.931;AC=12;AF=0.214;AN=56;BaseQRankSum=6.230;DP=620;FS=30.725;HRun=0;HaplotypeScore=209.8100;InbreedingCoeff=-0.1877;MQ=30.94;MQ0=6;MQRankSum=-3.811;QD=3.77;ReadPosRankSum=0.444;VQSLOD=1.5868;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:1.57:0,2,5	0/0:10,0:10:10.45:0,10,58	0/1:15,0:2:5.98:6,0,32	0/0:17,0:5:12.04:0,12,194	0/0:29,1:30:2.95:0,3,65	0/0:11,0:11:6.99:0,7,79	0/0:22,0:23:7.58:0,8,74	0/0:15,0:15:3.85:0,4,258	0/1:19,0:18:7.35:7,0,86	0/1:40,4:43:99:445,0,526	1/1:14,0:13:0.89:3,1,0	0/1:31,1:31:20.14:20,0,103	0/1:16,1:17:46.81:47,0,109	0/1:24,1:25:18.21:18,0,38	0/0:18,0:17:0.43:0,0,2	0/0:16,0:16:15.89:0,16,147	0/0:13,0:12:7.99:0,8,84	0/0:12,0:10:24.14:0,24,294	0/1:21,2:23:99:200,0,299	0/1:29,2:31:31.49:44,0,31	0/0:18,0:18:17.37:0,17,254	0/0:35,3:38:8.59:0,9,97	0/0:26,1:27:2.96:0,3,18	0/0:18,0:17:5.54:0,6,90	0/0:35,1:36:15.02:0,15,164	0/1:39,7:46:99:351,0,908	0/1:14,5:19:66.29:66,0,178	0/0:9,1:10:9.87:0,10,137
chr10	97516427	.	A	AC	747.23	PASS	AB=1.000;AC=29;AF=0.690;AN=42;BaseQRankSum=0.858;DP=86;FS=2.466;HRun=1;HaplotypeScore=85.8849;InbreedingCoeff=0.4281;MQ=41.32;MQ0=11;MQRankSum=0.827;QD=12.66;ReadPosRankSum=-0.421;VQSLOD=2.1529;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:9,0:2:3:0,3,26	0/0:5,0:1:3:0,3,29	0/1:2,0:2:0.14:0,0,0	./.	1/1:1,2:3:3.01:36,3,0	./.	./.	1/1:7,0:5:10.84:119,11,0	1/1:2,0:2:2.74:15,3,0	1/1:8,1:9:16.16:144,16,0	1/1:4,0:4:11.90:110,12,0	./.	1/1:4,1:4:8.76:80,9,0	1/1:1,3:4:9.03:136,9,0	./.	1/1:2,0:1:2.96:19,3,0	0/0:2,0:1:3.01:0,3,30	1/1:1,0:1:0.47:1,0,0	0/0:2,0:2:2.97:0,3,20	1/1:3,0:3:1.47:19,1,0	1/1:3,0:4:4.27:56,4,0	0/0:1,3:4:0:0,0,0	1/1:5,0:5:8.13:44,8,0	0/0:2,0:2:2.97:0,3,20	1/1:2,0:2:6.01:57,6,0	1/1:5,0:5:4.64:31,5,0
chr10	97525589	.	GT	G	411.11	PASS	AB=0.545;AC=3;AF=0.054;AN=56;BaseQRankSum=5.701;DP=493;FS=4.961;HRun=10;HaplotypeScore=49.5988;InbreedingCoeff=0.7616;MQ=76.51;MQ0=0;MQRankSum=-0.954;QD=14.68;ReadPosRankSum=2.253;VQSLOD=3.7237;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:16:35.98:312,36,0	0/0:11,0:11:30.07:0,30,323	0/0:24,0:19:36.03:0,36,355	0/0:8,0:8:14.82:0,15,136	0/0:23,0:23:63.16:0,63,689	0/0:20,0:20:54.10:0,54,572	0/0:14,0:14:36.10:0,36,398	0/0:44,0:44:99:0,114,1191	0/0:13,0:13:36.10:0,36,398	0/0:17,1:18:15.99:0,16,378	0/0:28,0:28:41.31:0,41,627	0/0:18,1:19:19.04:0,19,419	0/0:18,0:18:45.08:0,45,474	0/0:20,0:20:40.41:0,40,541	0/0:15,0:15:42.08:0,42,442	0/1:2,10:12:3.19:205,0,3	0/0:19,0:21:50.89:0,51,498	0/0:10,0:10:24.05:0,24,257	0/0:16,0:16:39.10:0,39,424	0/0:20,0:20:30.70:0,31,533	0/0:9,0:9:27.04:0,27,275	0/0:9,0:9:24.06:0,24,258	0/0:21,1:22:34.11:0,34,604	0/0:9,0:9:24.06:0,24,265	0/0:18,0:17:47.98:0,48,487	0/0:19,0:19:42.08:0,42,437	0/0:28,0:28:69.19:0,69,763	0/0:9,0:9:27.07:0,27,299
chr10	97525966	.	C	CT	3879.98	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-9.203;DP=492;FS=0.418;HRun=3;HaplotypeScore=43.7282;InbreedingCoeff=0.9917;MQ=72.63;MQ0=0;MQRankSum=-1.411;QD=37.31;ReadPosRankSum=0.786;VQSLOD=3.7119;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.17:0,60,700	0/0:8,0:8:21.06:0,21,252	0/0:10,0:10:21.06:0,21,245	0/0:7,0:7:13.28:0,13,142	0/0:23,0:23:66.18:0,66,770	0/0:24,0:24:69.21:0,69,828	0/0:15,0:15:42.10:0,42,481	0/0:28,0:28:81.21:0,81,933	0/0:20,0:20:54.16:0,54,647	0/0:23,0:23:63.18:0,63,747	0/0:27,0:27:81.23:0,81,959	0/0:15,0:15:42.04:0,42,484	0/0:11,0:11:30.08:0,30,349	0/0:12,0:12:30.09:0,30,357	0/0:12,0:12:33.10:0,33,396	0/0:9,0:9:27.08:0,27,324	0/0:27,0:26:75.23:0,75,900	0/0:17,0:17:51.16:0,51,610	1/1:2,16:18:54.13:695,54,0	1/1:0,24:24:69.19:944,69,0	1/1:2,13:15:30.10:420,30,0	0/0:22,0:22:63.18:0,63,744	0/0:21,0:21:60.18:0,60,718	0/0:9,0:9:27.08:0,27,324	0/0:11,0:11:33.10:0,33,396	1/1:1,19:20:33.71:772,34,0	1/1:0,27:27:75.25:1050,75,0	0/0:13,0:13:39.12:0,39,467
chr10	97526088	.	T	TTCTC	6455.51	PASS	AB=0.800;AC=16;AF=0.286;AN=56;BaseQRankSum=7.234;DP=600;FS=0.832;HRun=0;HaplotypeScore=107.3137;InbreedingCoeff=0.8232;MQ=59.13;MQ0=7;MQRankSum=-6.843;QD=31.96;ReadPosRankSum=0.304;VQSLOD=4.5440;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,5:23:41.91:735,42,0	0/0:6,0:6:15.04:0,15,236	0/0:34,0:16:17.54:0,18,412	0/1:44,0:14:7.63:8,0,197	0/0:31,0:31:81.24:0,81,1305	0/0:24,0:24:72.21:0,72,1146	0/0:18,0:18:48.07:0,48,651	0/0:23,0:23:54.15:0,54,791	0/0:25,0:25:60.20:0,60,1013	0/0:27,0:27:75.25:0,75,1255	0/0:27,0:27:72.22:0,72,1154	0/0:14,0:14:26.79:0,27,487	0/0:14,0:14:39.10:0,39,599	0/0:12,0:12:33.10:0,33,543	0/0:9,0:9:21.07:0,21,341	0/1:5,9:15:40.34:138,0,40	0/0:22,0:23:34.86:0,35,813	1/1:7,11:18:12.61:321,13,0	1/1:5,0:5:15.04:277,15,0	1/1:20,7:27:66.16:1445,66,0	1/1:9,2:11:21.01:347,21,0	0/0:17,0:17:42.13:0,42,680	0/0:22,0:22:63.19:0,63,1017	0/0:23,0:23:57.20:0,57,991	0/0:23,0:23:51.17:0,51,862	1/1:11,21:32:23.02:1523,23,0	1/1:19,6:25:72.22:1662,72,0	0/0:25,0:25:69.19:0,69,1094
chr10	97526111	.	TC	T	497.51	PASS	AB=0.836;AC=6;AF=0.107;AN=56;BaseQRankSum=8.991;DP=592;FS=2.070;HRun=1;HaplotypeScore=88.3502;InbreedingCoeff=-0.1231;MQ=51.77;MQ0=17;MQRankSum=-6.705;QD=4.08;ReadPosRankSum=1.098;VQSLOD=0.4034;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,4:23:46.55:47,0,301	0/0:5,0:5:15.03:0,15,194	0/0:40,0:11:33.03:0,33,420	0/0:54,0:11:26.11:0,26,273	0/0:27,0:27:81.22:0,81,1112	0/0:24,0:23:69.03:0,69,861	0/0:15,0:14:42.14:0,42,600	0/0:28,0:28:80.69:0,81,983	0/0:22,0:21:63.13:0,63,853	0/0:35,0:34:99:0,102,1429	0/0:22,0:22:65.93:0,66,875	0/0:13,0:13:36.12:0,36,502	0/0:11,0:11:33.09:0,33,447	0/0:11,0:11:33.11:0,33,470	0/0:11,0:11:30.09:0,30,402	0/1:9,1:10:43.50:44,0,73	0/0:25,0:25:52.06:0,52,856	0/0:13,0:11:26.41:0,26,276	0/1:9,1:9:29.59:30,0,130	0/1:15,9:24:92.36:173,0,92	0/0:6,2:8:9.49:0,9,82	0/0:16,0:16:45.15:0,45,643	0/0:24,0:23:69.20:0,69,949	0/0:25,0:25:66.79:0,67,868	0/0:21,0:21:54.17:0,54,752	0/1:23,3:26:99:141,0,183	0/1:17,11:28:92.56:188,0,93	0/0:20,0:19:57.19:0,57,814
chr10	97526123	.	TTTC	T	919.88	PASS	AB=0.827;AC=7;AF=0.125;AN=56;BaseQRankSum=11.633;DP=559;FS=0.000;HRun=0;HaplotypeScore=100.9530;InbreedingCoeff=-0.1529;MQ=49.49;MQ0=15;MQRankSum=-10.366;QD=7.73;ReadPosRankSum=1.273;VQSLOD=2.3196;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,4:21:99:105,0,179	0/0:5,0:5:15.05:0,15,270	0/0:30,0:7:14.97:0,15,175	0/0:37,0:5:1.10:0,1,33	0/0:26,0:26:78.26:0,78,1534	0/0:25,0:24:72.24:0,72,1385	0/0:16,0:15:45.15:0,45,874	0/0:25,0:25:69.23:0,69,1180	0/0:20,0:19:54.18:0,54,1072	0/0:34,0:33:99:0,99,1901	0/0:24,0:24:69.23:0,69,1252	0/0:14,0:14:39.13:0,39,747	0/0:14,0:14:30.09:0,30,595	0/0:14,0:14:42.14:0,42,777	0/0:10,0:10:26.96:0,27,535	0/1:9,0:9:35.85:36,0,147	0/0:24,0:23:59.56:0,60,1138	0/0:13,0:11:30:0,30,575	0/1:8,1:8:35.03:35,0,58	0/1:12,9:21:22.29:272,0,22	0/1:6,3:9:34.24:34,0,39	0/0:19,0:19:54.18:0,54,1126	0/0:23,0:22:63.20:0,63,1220	0/0:26,0:26:66.21:0,66,1328	0/0:21,0:21:48.16:0,48,964	0/1:20,4:24:60.06:340,0,60	0/1:16,9:25:50.05:228,0,50	0/0:20,0:19:57.19:0,57,1013
chr10	97526136	.	TTCTTTCTTTC	T	3850.62	PASS	AB=1.000;AC=12;AF=0.222;AN=54;BaseQRankSum=9.596;DP=534;FS=2.107;HRun=0;HaplotypeScore=159.9364;InbreedingCoeff=0.7363;MQ=50.36;MQ0=14;MQRankSum=-9.861;QD=31.31;ReadPosRankSum=-3.771;VQSLOD=2.4261;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:26:59.82:60,0,375	0/0:6,0:6:5.91:0,6,382	./.	0/0:16,0:3:2.88:0,3,15	0/0:27,0:27:75.21:0,75,2557	0/0:27,0:26:68.89:0,69,2401	0/0:17,0:16:45.11:0,45,1491	0/0:29,0:29:43.94:0,44,1728	0/0:22,0:21:57.15:0,57,1905	0/0:36,0:31:82.96:0,83,3040	0/0:20,0:20:49.48:0,49,1844	0/0:12,0:12:33.10:0,33,1257	0/0:14,0:14:33.11:0,33,1148	0/0:15,0:15:42.09:0,42,1320	0/0:16,0:15:29.98:0,30,1163	0/1:9,0:9:10.66:11,0,341	0/0:27,0:26:72.18:0,72,2221	0/0:13,0:10:11.91:0,12,928	1/1:9,2:10:25.50:477,25,0	1/1:15,8:23:59.20:1040,59,0	1/1:10,0:10:17.92:261,18,0	0/0:20,0:20:57.15:0,57,2137	0/0:24,0:23:56.66:0,57,1984	0/0:28,0:28:59.91:0,60,2471	0/0:20,0:20:45.08:0,45,1734	1/1:21,3:23:56.56:1197,57,0	1/1:12,8:20:36.08:805,36,0	0/0:15,0:14:42.10:0,42,1308
chr10	97526144	.	TTC	T	1372.03	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=11.504;DP=508;FS=3.389;HRun=0;HaplotypeScore=82.1665;InbreedingCoeff=0.7989;MQ=53.81;MQ0=14;MQRankSum=-9.449;QD=11.34;ReadPosRankSum=-3.945;VQSLOD=2.2394;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:11.01:251,11,0	0/0:4,0:4:2.93:0,3,128	0/0:7,0:2:2.03:0,2,6	./.	0/0:28,0:28:72.37:0,72,711	0/0:23,0:22:53.83:0,54,726	0/0:15,0:14:39.02:0,39,429	0/0:29,0:29:10.83:0,11,456	0/0:21,0:20:46.61:0,47,542	0/0:32,0:27:73.90:0,74,884	0/0:17,0:17:43.37:0,43,578	0/0:11,0:11:27.83:0,28,338	0/0:14,0:14:26.91:0,27,323	0/0:13,0:13:29.94:0,30,337	0/0:17,0:16:8.93:0,9,333	0/1:10,0:10:24.42:125,0,24	0/0:25,0:24:57.64:0,58,719	0/0:13,0:10:11.69:0,12,237	1/1:12,2:11:23.53:172,24,0	1/1:17,1:18:15.89:269,16,0	1/1:8,3:11:11.89:98,12,0	0/0:20,0:20:52.72:0,53,567	0/0:28,0:27:58.71:0,59,544	0/0:28,0:28:56.67:0,57,720	0/0:19,0:19:41.88:0,42,467	1/1:24,3:26:57.61:436,58,0	1/1:16,0:16:26.80:202,27,0	0/0:13,0:13:38.94:0,39,370
chr10	97526145	.	TC	T	1272.01	PASS	AB=0.951;AC=15;AF=0.278;AN=54;BaseQRankSum=8.864;DP=506;FS=4.257;HRun=1;HaplotypeScore=73.0960;InbreedingCoeff=0.7163;MQ=53.95;MQ0=14;MQRankSum=-10.785;QD=7.80;ReadPosRankSum=-4.470;VQSLOD=-0.7426;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,1:23:31.88:303,32,0	0/0:4,0:4:4.56:0,5,97	0/0:6,1:2:2.20:0,2,7	./.	0/0:28,0:28:65.41:0,65,558	0/0:23,0:22:53.05:0,53,577	0/0:16,0:15:38.45:0,38,346	0/1:29,0:29:5.91:6,0,393	0/0:22,0:21:25.37:0,25,426	0/0:32,0:27:73.79:0,74,752	0/0:17,0:17:45.33:0,45,457	0/0:12,0:12:11.95:0,12,233	0/0:13,0:13:19.54:0,20,244	0/0:12,0:12:25.26:0,25,272	0/1:16,1:16:0.87:1,0,225	0/1:9,1:10:9.41:111,0,9	0/0:25,0:24:56.31:0,56,579	0/0:13,0:10:9.27:0,9,165	1/1:13,1:11:27.24:184,27,0	1/1:16,1:17:16:200,16,0	1/1:4,7:11:11.71:96,12,0	0/0:20,0:20:30.14:0,30,432	0/0:28,0:27:43.90:0,44,448	0/0:30,0:30:64.86:0,65,585	0/0:18,0:18:38.23:0,38,366	1/1:26,1:26:58.43:393,58,0	1/1:15,0:15:27.42:159,27,0	0/0:13,0:13:38.94:0,39,336
chr10	97527239	.	T	TA	1528.39	PASS	AB=0.581;AC=3;AF=0.054;AN=56;BaseQRankSum=-6.089;DP=612;FS=2.758;HRun=4;HaplotypeScore=61.1174;InbreedingCoeff=0.5671;MQ=75.97;MQ0=0;MQRankSum=0.111;QD=23.51;ReadPosRankSum=3.526;VQSLOD=2.6762;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,41:47:96.26:1244,96,0	0/0:14,0:13:42:0,42,435	0/0:21,0:17:26.04:0,26,196	0/0:15,0:14:2.81:0,3,30	0/0:22,0:22:65.76:0,66,709	0/0:20,0:20:51.11:0,51,552	0/0:27,0:27:81.07:0,81,847	0/0:25,0:25:66.02:0,66,657	0/0:13,0:13:36.08:0,36,386	0/0:19,0:19:54.15:0,54,604	0/0:25,0:25:62.91:0,63,633	0/0:26,0:26:66.12:0,66,698	0/0:20,0:20:60.16:0,60,665	0/0:17,0:17:51.13:0,51,564	0/0:23,0:23:66.11:0,66,695	0/1:5,13:18:27.59:390,0,28	0/0:23,0:23:63.02:0,63,645	0/0:19,0:19:54.15:0,54,607	0/0:31,0:31:84.14:0,84,869	0/0:32,0:32:84.17:0,84,899	0/0:14,0:14:39.08:0,39,419	0/0:27,0:27:66.16:0,66,726	0/0:19,0:19:57.05:0,57,607	0/0:25,0:25:60.10:0,60,636	0/0:26,0:26:75.17:0,75,811	0/0:15,0:15:39.10:0,39,432	0/0:24,0:23:66.13:0,66,704	0/0:5,0:5:15.04:0,15,168
chr10	97528847	.	G	GGGAGGA	900.66	PASS	AB=0.667;AC=9;AF=0.161;AN=56;BaseQRankSum=0.754;DP=281;FS=24.247;HRun=0;HaplotypeScore=59.9490;InbreedingCoeff=0.7868;MQ=63.32;MQ0=4;MQRankSum=-3.402;QD=27.29;ReadPosRankSum=-0.181;VQSLOD=1.4777;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:48.16:0,48,1154	0/0:2,0:2:6.02:0,6,150	0/0:13,0:10:30.10:0,30,670	0/0:9,0:8:21.07:0,21,457	0/0:10,0:10:30.10:0,30,672	0/0:8,0:8:15.04:0,15,300	0/0:13,0:13:36.12:0,36,837	0/0:17,0:17:48.11:0,48,1049	0/0:13,0:13:36.07:0,36,807	0/0:14,0:14:42.13:0,42,953	0/0:13,0:13:39.03:0,39,858	0/0:12,0:12:23.95:0,24,377	0/0:14,0:14:36.11:0,36,772	0/0:10,0:10:24.07:0,24,534	0/0:14,0:14:33.10:0,33,726	0/0:6,0:6:18.06:0,18,448	0/0:12,0:12:27.09:0,27,669	0/0:5,0:5:15.03:0,15,322	1/1:2,1:2:3.01:113,3,0	1/1:0,11:11:17.92:581,18,0	0/1:2,2:1:0:0,0,0	0/0:7,0:7:21.07:0,21,521	0/0:11,0:11:33.11:0,33,823	0/0:10,0:10:21.06:0,21,433	0/0:11,0:11:27.09:0,27,672	1/1:2,5:7:9:229,9,0	1/1:0,4:2:3.01:112,3,0	0/0:3,0:3:9:0,9,171
chr10	97529159	.	TG	T	2582.13	PASS	AB=0.800;AC=11;AF=0.196;AN=56;BaseQRankSum=9.408;DP=524;FS=13.767;HRun=8;HaplotypeScore=69.3102;InbreedingCoeff=0.8799;MQ=77.11;MQ0=0;MQRankSum=2.137;QD=23.05;ReadPosRankSum=1.241;VQSLOD=3.1800;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:93.22:0,93,383	0/0:7,0:7:21.06:0,21,254	0/0:19,1:19:25.95:0,26,308	0/0:18,0:18:14.62:0,15,213	0/0:13,0:13:36.11:0,36,434	0/0:15,0:15:45.13:0,45,532	0/0:25,0:25:66.20:0,66,788	0/0:17,0:17:27.08:0,27,326	0/0:17,0:17:42.13:0,42,507	0/0:14,0:14:42.11:0,42,484	0/0:8,0:8:21.06:0,21,254	0/0:19,0:19:54.15:0,54,628	0/0:18,0:18:54.17:0,54,651	0/0:29,0:29:81.24:0,81,966	0/0:21,0:21:60.18:0,60,725	0/0:29,0:29:87.23:0,87,1019	0/0:29,0:28:78.24:0,78,941	0/0:20,0:20:48.10:0,48,553	1/1:4,11:15:33.04:313,33,0	1/1:2,15:17:45.07:434,45,0	1/1:1,15:16:42.07:406,42,0	0/0:6,0:6:15.05:0,15,181	0/0:10,0:10:30.09:0,30,357	0/0:17,0:17:42.12:0,42,495	0/0:20,0:20:49.09:0,49,611	1/1:3,27:30:84.13:810,84,0	1/1:3,27:30:81.13:782,81,0	0/1:3,1:4:16.94:17,0,97
chr10	97529163	.	G	GT	1426.86	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.034;DP=518;FS=3.106;HRun=0;HaplotypeScore=72.5100;InbreedingCoeff=0.9676;MQ=77.38;MQ0=0;MQRankSum=0.072;QD=35.67;ReadPosRankSum=0.771;VQSLOD=3.2656;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:40:99:1522,105,0	0/0:7,0:7:21.07:0,21,293	0/0:20,0:19:49.41:0,49,578	0/0:16,0:16:33.03:0,33,388	0/0:12,0:12:36.12:0,36,501	0/0:18,0:18:54.14:0,54,689	0/0:24,0:24:72.22:0,72,974	0/0:14,0:14:42.08:0,42,503	0/0:16,0:16:48.14:0,48,637	0/0:17,0:17:48.13:0,48,611	0/0:8,0:8:21.07:0,21,293	0/0:18,0:18:54.16:0,54,723	0/0:20,0:20:57.18:0,57,777	0/0:27,0:27:81.26:0,81,1116	0/0:22,0:22:66.20:0,66,891	0/0:29,0:29:87.26:0,87,1169	0/0:26,0:25:78.26:0,78,1074	0/0:18,0:18:51.10:0,51,655	0/0:16,0:16:47.14:0,47,310	0/0:17,0:17:46.83:0,47,274	0/0:18,0:18:46.89:0,47,287	0/0:6,0:6:18.05:0,18,235	0/0:10,0:10:30.10:0,30,410	0/0:18,0:18:34.15:0,34,628	0/0:18,0:18:54.18:0,54,745	0/0:29,0:29:84.79:0,85,495	0/0:29,0:29:78.96:0,79,457	0/0:5,0:5:14.91:0,15,161
chr10	97529971	.	TG	T	1928.67	PASS	AB=0.936;AC=15;AF=0.268;AN=56;BaseQRankSum=8.117;DP=476;FS=4.086;HRun=9;HaplotypeScore=54.0049;InbreedingCoeff=0.7246;MQ=66.11;MQ0=0;MQRankSum=-0.159;QD=13.39;ReadPosRankSum=0.925;VQSLOD=3.2961;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,12:15:39.01:357,39,0	0/0:6,0:6:14.99:0,15,157	0/1:18,1:18:19.19:19,0,237	0/1:12,0:9:11.25:11,0,87	0/0:23,0:23:51.15:0,51,589	0/0:25,0:25:69.20:0,69,796	0/0:21,1:22:35.71:0,36,656	0/0:24,0:24:44.48:0,44,481	0/0:14,0:14:36.09:0,36,405	0/0:24,1:26:41.56:0,42,699	0/0:14,0:14:39.12:0,39,450	0/0:16,1:17:17.67:0,18,457	0/1:10,2:12:18.85:19,0,267	0/0:12,0:12:30.08:0,30,337	0/0:17,0:17:39.12:0,39,450	0/0:15,1:16:11.63:0,12,378	0/0:25,1:26:35.20:0,35,642	0/0:9,0:9:27.08:0,27,311	1/1:3,7:11:26.01:213,26,0	1/1:4,18:22:44.29:410,44,0	1/1:2,13:15:36.01:330,36,0	0/0:18,0:18:45.13:0,45,519	0/0:17,0:17:42.12:0,42,485	0/0:22,0:22:66.18:0,66,749	0/0:13,0:13:33.10:0,33,380	1/1:6,16:22:54.02:489,54,0	1/1:1,15:16:29.54:274,30,0	0/0:11,0:11:32.93:0,33,357
chr10	97530439	.	TG	T	3562.43	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=14.019;DP=484;FS=6.265;HRun=3;HaplotypeScore=72.3657;InbreedingCoeff=0.8668;MQ=68.32;MQ0=11;MQRankSum=-4.884;QD=17.81;ReadPosRankSum=-1.306;VQSLOD=2.8775;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:9:10.24:41,10,0	0/1:7,0:7:5.39:5,0,157	0/0:37,0:9:18.99:0,19,180	0/1:46,0:18:0.04:0,0,127	0/0:24,0:24:72.19:0,72,957	0/0:17,0:17:46.34:0,46,566	0/0:14,0:14:42.08:0,42,551	0/0:27,0:27:78.05:0,78,914	0/0:9,0:9:27.09:0,27,380	0/0:27,0:27:69.16:0,69,898	0/0:24,0:24:69.06:0,69,814	0/0:5,0:5:12.03:0,12,154	0/0:10,0:10:30.08:0,30,404	0/0:9,0:9:27.09:0,27,380	0/0:9,0:9:21.07:0,21,295	1/1:1,7:8:18:203,18,0	0/0:20,0:20:47.78:0,48,695	1/1:5,7:13:35.72:345,36,0	1/1:8,10:21:56.43:510,56,0	1/1:7,14:26:57.76:691,58,0	1/1:6,6:11:23.99:260,24,0	0/0:11,0:10:30.07:0,30,369	0/0:14,0:15:42.11:0,42,556	0/0:5,0:5:8.99:0,9,104	0/0:15,0:15:42.09:0,42,525	1/1:3,25:29:66.42:824,66,0	1/1:10,15:27:52.45:683,52,0	0/0:6,0:6:18.03:0,18,226
chr10	97530452	.	G	GTTT	3140.57	PASS	AB=0.895;AC=16;AF=0.286;AN=56;BaseQRankSum=11.765;DP=480;FS=5.922;HRun=10;HaplotypeScore=94.8504;InbreedingCoeff=0.8102;MQ=66.49;MQ0=10;MQRankSum=-4.078;QD=19.75;ReadPosRankSum=-2.080;VQSLOD=1.5951;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,4:12:17.67:185,18,0	0/0:6,0:7:14.87:0,15,158	0/0:36,0:11:12.58:0,13,101	0/0:35,0:12:23.65:0,24,235	0/0:24,0:25:30.47:0,30,614	0/0:16,0:17:40.44:0,40,491	0/0:14,0:15:34.33:0,34,413	0/0:27,0:27:43.87:0,44,515	0/0:10,0:10:26.25:0,26,275	0/0:25,0:26:52.31:0,52,600	0/0:19,0:21:43.32:0,43,512	0/0:4,0:4:12.02:0,12,134	0/0:12,0:12:30.03:0,30,337	0/0:12,0:12:3.85:0,4,211	0/0:7,0:7:21.05:0,21,242	1/1:4,0:9:20.96:171,21,0	0/0:17,0:19:43.37:0,43,520	0/1:11,0:14:42.52:148,0,43	1/1:10,3:16:41.42:448,41,0	1/1:16,9:25:68.70:871,69,0	1/1:4,5:12:20.23:232,20,0	0/0:11,0:10:30.03:0,30,325	0/0:14,0:14:32.82:0,33,329	0/0:8,0:8:12:0,12,142	0/0:14,0:14:15.05:0,15,259	1/1:24,5:29:62.96:699,63,0	1/1:27,2:28:56.84:582,57,0	0/1:10,0:10:1.78:2,0,117
chr10	97531196	.	T	TG	896.40	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=5.106;DP=525;FS=5.732;HRun=8;HaplotypeScore=65.1477;InbreedingCoeff=0.6298;MQ=68.26;MQ0=0;MQRankSum=-1.401;QD=10.55;ReadPosRankSum=0.214;VQSLOD=1.9908;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:56.65:0,57,483	0/0:18,0:18:45:0,45,404	0/1:17,0:16:0.36:0,0,140	0/0:15,0:15:28.74:0,29,234	0/0:26,0:26:65.99:0,66,592	0/0:22,0:22:47.93:0,48,422	0/0:17,0:17:38.96:0,39,339	0/0:24,0:24:50.97:0,51,452	0/0:20,1:21:28.36:0,28,503	0/0:20,0:20:44.98:0,45,400	0/0:23,0:23:42:0,42,379	0/0:17,0:17:45.01:0,45,404	0/0:23,0:23:65.98:0,66,586	0/0:20,0:20:48:0,48,431	0/0:12,0:12:26.96:0,27,239	1/1:4,18:22:51.15:589,51,0	0/0:12,0:12:33.02:0,33,301	1/1:3,12:15:36.11:416,36,0	0/0:13,0:13:11.08:0,11,27	0/0:19,0:19:18.32:0,18,63	0/0:21,0:21:3.42:0,3,39	0/0:18,0:18:47.10:0,47,436	0/0:18,0:18:44.98:0,45,400	0/0:17,0:17:48:0,48,433	0/0:19,0:19:41.99:0,42,379	0/0:12,0:12:11.70:0,12,29	0/1:30,0:30:19.01:19,0,103	0/0:10,0:10:27.01:0,27,247
chr10	97532623	.	T	TCAAC	937.60	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.127;DP=852;FS=4.720;HRun=0;HaplotypeScore=131.5470;InbreedingCoeff=0.8033;MQ=59.39;MQ0=6;MQRankSum=-0.170;QD=20.38;ReadPosRankSum=-0.574;VQSLOD=3.3508;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,36:46:42.14:1032,42,0	0/0:7,0:7:12.04:0,12,195	0/0:31,0:21:23.12:0,23,280	0/0:29,0:23:33.82:0,34,376	0/0:17,0:17:48.13:0,48,698	0/0:32,0:32:84.26:0,84,1311	0/0:31,0:31:63.17:0,63,945	0/0:29,0:29:56.42:0,56,768	0/0:39,0:39:96.19:0,96,1453	0/0:45,0:45:96.30:0,96,1489	0/0:27,0:27:72.16:0,72,1145	0/0:32,0:32:60.13:0,60,904	0/0:27,0:27:75.22:0,75,1170	0/0:26,0:26:66.21:0,66,1046	0/0:46,0:46:99:0,108,1457	0/0:3,0:21:7.48:0,7,189	0/0:29,0:29:60.16:0,60,924	0/0:10,0:10:4.83:0,5,43	0/0:30,0:27:59.66:0,60,738	0/0:26,0:26:51.14:0,51,777	0/0:49,0:48:99:0,117,1733	0/0:25,0:25:57.19:0,57,919	0/0:29,0:29:66.16:0,66,1002	0/0:46,0:46:99:0,108,1738	0/0:21,0:21:51.07:0,51,787	0/0:35,0:35:81.21:0,81,1147	0/0:46,0:46:99:0,117,1711	0/0:19,0:20:54.61:0,55,784
chr10	97532747	.	CCAACCAATCAAT	C	871.84	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.563;DP=883;FS=4.030;HRun=0;HaplotypeScore=291.6516;InbreedingCoeff=0.9425;MQ=57.26;MQ0=4;MQRankSum=-4.112;QD=29.06;ReadPosRankSum=0.352;VQSLOD=2.4360;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:87.28:0,87,3874	0/0:13,0:13:36.12:0,36,1737	0/0:42,0:27:69.17:0,69,2373	0/0:21,0:15:39.11:0,39,1311	0/0:29,0:29:75.24:0,75,3329	0/0:26,0:26:66.21:0,66,3030	0/0:35,0:35:78.27:0,78,3371	0/0:56,0:56:99:0,129,4679	0/0:38,0:38:93.31:0,93,4552	0/0:44,0:44:99:0,111,5336	0/0:24,0:24:63.22:0,63,3231	0/0:40,0:40:99:0,108,5468	0/0:30,0:29:75.24:0,75,3265	0/0:25,0:25:66.23:0,66,3445	0/0:37,0:37:96.33:0,96,4987	1/1:16,6:22:30.07:796,30,0	0/0:29,0:29:69.17:0,69,3422	1/1:7,1:8:5.96:188,6,0	0/0:34,0:33:72.25:0,72,3540	0/0:33,0:31:84.29:0,84,4000	0/0:46,0:46:99:0,123,5804	0/0:29,0:29:69.21:0,69,3150	0/0:22,0:22:50.93:0,51,2729	0/0:46,0:46:99:0,111,5811	0/0:24,0:24:66.23:0,66,3093	0/0:43,0:42:99:0,120,5281	0/0:29,0:29:78.27:0,78,4324	0/0:20,0:20:57.19:0,57,2961
chr10	97532809	.	CTCTCTGTCTG	C	634.70	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.325;DP=886;FS=0.000;HRun=0;HaplotypeScore=268.4137;InbreedingCoeff=0.9764;MQ=64.27;MQ0=10;MQRankSum=-3.407;QD=20.47;ReadPosRankSum=-3.021;VQSLOD=1.6388;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,13:30:29.92:729,30,0	0/0:14,0:14:36.11:0,36,1405	0/0:33,0:19:13.68:0,14,566	0/0:38,0:22:24.64:0,25,362	0/0:23,0:23:54.19:0,54,2182	0/0:30,0:30:72.25:0,72,3199	0/0:31,0:31:69.18:0,69,2409	0/0:43,0:44:99:0,107,3334	0/0:31,0:31:84.27:0,84,3584	0/0:56,0:55:99:0,151,6626	0/0:16,0:16:36.12:0,36,1391	0/0:33,0:33:90.28:0,90,2997	0/0:30,0:29:81.28:0,81,3416	0/0:29,0:29:78.21:0,78,3217	0/0:33,0:33:84.27:0,84,3627	0/0:23,0:22:51.17:0,51,1257	0/0:21,0:21:60.21:0,60,2366	0/0:19,0:18:39.13:0,39,872	0/0:26,0:22:36.12:0,36,1257	0/0:35,0:35:84.26:0,84,3757	0/0:48,0:46:99:0,102,4146	0/0:33,0:33:86.88:0,87,3479	0/0:28,0:28:81.26:0,81,3421	0/0:38,0:38:90.28:0,90,3391	0/0:26,0:26:69.24:0,69,2802	0/0:51,0:51:99:0,119,5484	0/0:44,0:44:99:0,101,4692	0/0:22,0:22:57.20:0,57,2172
chr10	97532817	.	CTG	C	318.64	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.120;DP=868;FS=4.693;HRun=0;HaplotypeScore=135.2747;InbreedingCoeff=0.9816;MQ=60.86;MQ0=19;MQRankSum=-4.094;QD=9.96;ReadPosRankSum=-4.223;VQSLOD=2.5774;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,7:31:27.58:413,28,0	0/0:13,0:13:39.10:0,39,682	0/0:29,0:13:35.97:0,36,498	0/0:34,0:17:14.67:0,15,242	0/0:25,0:25:66.21:0,66,1230	0/0:30,0:30:81.23:0,81,1553	0/0:31,0:31:71.73:0,72,1298	0/0:51,0:47:99:0,129,2260	0/0:32,0:32:93.29:0,93,1689	0/0:55,0:54:99:0,163,3023	0/0:15,0:15:39.12:0,39,711	0/0:32,0:32:61.81:0,62,1640	0/0:29,0:28:84.29:0,84,1618	0/0:29,0:29:81.19:0,81,1394	0/0:31,0:31:90.25:0,90,1625	0/0:27,0:26:47.65:0,48,284	0/0:21,0:21:63.17:0,63,1159	0/0:17,0:16:31.95:0,32,125	0/0:19,0:13:39.06:0,39,638	0/0:34,0:34:87.25:0,87,1609	0/0:46,0:44:99:0,117,2097	0/0:31,0:31:87.09:0,87,1614	0/0:30,0:29:84.26:0,84,1543	0/0:39,0:39:99:0,105,1883	0/0:24,0:24:69.21:0,69,1265	0/0:48,0:48:99:0,122,2656	0/0:42,0:42:99:0,100,2061	0/0:22,0:22:66.23:0,66,1212
chr10	97532819	.	GTC	G	127.86	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.284;DP=855;FS=3.626;HRun=0;HaplotypeScore=131.3759;InbreedingCoeff=0.9945;MQ=59.09;MQ0=21;MQRankSum=-3.835;QD=4.00;ReadPosRankSum=-3.472;VQSLOD=1.6625;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:30:27.32:222,27,0	0/0:13,0:13:36.12:0,36,641	0/0:28,0:12:33.72:0,34,389	0/0:32,0:15:22.98:0,23,263	0/0:25,0:25:66.23:0,66,1179	0/0:31,0:31:84.23:0,84,1500	0/0:27,0:27:65.71:0,66,1146	0/0:50,0:46:99:0,126,2114	0/0:30,0:30:90.31:0,90,1619	0/0:56,0:55:99:0,166,2947	0/0:18,0:18:48.08:0,48,712	0/0:31,1:32:54.04:0,54,1469	0/0:29,0:28:84.29:0,84,1529	0/0:27,0:27:69.24:0,69,1253	0/0:30,0:30:81.28:0,81,1468	0/0:26,0:25:39.83:0,40,192	0/0:21,0:21:60.18:0,60,1057	0/0:16,0:15:25.73:0,26,87	0/0:20,0:14:36.10:0,36,591	0/0:34,0:34:84.26:0,84,1508	0/0:42,1:41:99:0,111,1977	0/0:32,0:32:90.25:0,90,1526	0/0:30,0:29:84.26:0,84,1464	0/0:37,0:37:99:0,99,1705	0/0:24,0:24:63.22:0,63,1155	0/0:48,1:49:98.60:0,99,2453	0/0:40,1:41:83.34:0,83,1909	0/0:22,0:22:66.20:0,66,1131
chr10	97532827	.	CTCTG	C	129.09	PASS	AB=0.893;AC=3;AF=0.054;AN=56;BaseQRankSum=8.829;DP=854;FS=5.428;HRun=0;HaplotypeScore=162.8644;InbreedingCoeff=0.3885;MQ=57.07;MQ0=25;MQRankSum=2.368;QD=3.07;ReadPosRankSum=1.901;VQSLOD=1.8145;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:30.48:0,30,387	0/0:12,0:12:33.11:0,33,765	0/0:27,0:11:8.59:0,9,130	0/0:29,0:12:15.20:0,15,159	0/0:26,0:26:60.21:0,60,1400	0/0:35,0:35:90.31:0,90,1884	0/0:25,0:25:32.23:0,32,813	0/0:49,0:45:96.13:0,96,1823	0/0:31,0:31:87.30:0,87,2025	0/0:59,0:58:99:0,144,3127	0/0:17,0:17:48.14:0,48,1053	0/0:26,0:26:54.45:0,54,1257	0/0:30,0:30:81.28:0,81,1893	0/0:25,0:25:60.21:0,60,1486	0/0:30,0:30:78.27:0,78,1688	0/1:22,3:24:12.88:177,0,13	0/0:19,0:19:48.16:0,48,1138	1/1:16,1:16:0.35:41,0,0	0/0:22,0:15:36.09:0,36,740	0/0:32,0:32:87.25:0,87,1809	0/0:45,0:43:99:0,111,2478	0/0:31,0:31:75.24:0,75,1611	0/0:30,0:29:69.24:0,69,1622	0/0:36,0:36:84.27:0,84,1890	0/0:26,0:26:57.19:0,57,1167	0/0:50,0:50:99:0,108,2215	0/0:40,0:40:98.93:0,99,2233	0/0:26,0:26:55.91:0,56,1204
chr10	97532831	.	G	GTC	1559.62	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.557;DP=853;FS=1.412;HRun=0;HaplotypeScore=131.7375;InbreedingCoeff=0.9942;MQ=56.53;MQ0=22;MQRankSum=0.186;QD=38.04;ReadPosRankSum=4.393;VQSLOD=5.4340;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:30:38.99:0,39,518	0/0:11,0:11:33.11:0,33,473	0/0:22,0:8:21.04:0,21,266	0/0:26,0:12:18.82:0,19,222	0/0:25,0:25:69.20:0,69,950	0/0:36,0:36:96.23:0,96,1350	0/0:24,0:24:48.14:0,48,667	0/0:49,0:45:99:0,123,1741	0/0:35,0:35:99:0,99,1359	0/0:57,0:56:99:0,166,2317	0/0:17,0:17:48.16:0,48,687	0/0:23,0:23:66.11:0,66,917	0/0:31,0:31:90.30:0,90,1283	0/0:27,0:27:72.21:0,72,993	0/0:30,0:30:78.26:0,78,1114	1/1:4,20:23:55.93:967,56,0	0/0:24,0:24:69.14:0,69,921	1/1:3,14:16:39.13:715,39,0	0/0:23,0:18:45.09:0,45,593	0/0:34,0:34:89.44:0,89,1265	0/0:45,0:43:99:0,117,1653	0/0:33,0:33:84.27:0,84,1174	0/0:30,0:28:81.24:0,81,1120	0/0:36,0:36:93.28:0,93,1287	0/0:25,0:25:66.21:0,66,924	0/0:46,0:46:99:0,123,1665	0/0:42,0:41:98.35:0,98,1439	0/0:27,0:27:68.29:0,68,919
chr10	97532903	.	GTCTGTCTCTCTGTCTCTT	G	4941.54	PASS	AB=0.877;AC=8;AF=0.143;AN=56;BaseQRankSum=3.243;DP=810;FS=5.266;HRun=0;HaplotypeScore=340.3577;InbreedingCoeff=0.6856;MQ=58.65;MQ0=24;MQRankSum=-7.558;QD=38.01;ReadPosRankSum=-1.928;VQSLOD=2.9309;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:99:0,111,4263	0/0:14,0:14:39.09:0,39,1920	0/0:35,0:8:7.86:0,8,164	0/0:48,0:13:2.92:0,3,80	0/0:23,0:23:63.21:0,63,3274	0/0:37,0:37:99:0,105,4465	0/0:33,0:33:84.23:0,84,3100	0/0:56,0:55:99:0,126,3265	0/0:20,0:20:54.16:0,54,2454	0/0:49,0:48:99:0,117,5292	0/0:32,0:32:78.11:0,78,3304	0/0:21,0:21:57.18:0,57,2639	0/0:22,0:22:57.20:0,57,2972	0/0:18,0:18:48.16:0,48,2367	0/0:31,0:29:81.28:0,81,4209	0/0:29,0:28:18.95:0,19,1134	0/0:31,0:31:81.28:0,81,4184	0/0:6,0:5:6.02:0,6,239	1/1:21,1:18:36.12:841,36,0	1/1:21,7:26:25.53:828,26,0	1/1:20,0:16:15.05:410,15,0	0/0:27,0:27:75.26:0,75,3234	0/0:19,0:19:45.14:0,45,1712	0/0:34,0:34:70.03:0,70,2938	0/0:24,0:24:60.21:0,60,2762	0/1:32,3:32:99:1664,0,227	0/1:20,5:22:2.71:1199,0,3	0/0:26,0:26:57.75:0,58,2838
chr10	97532907	.	GTC	G	1336.86	PASS	AB=0.893;AC=10;AF=0.179;AN=56;BaseQRankSum=11.152;DP=782;FS=5.008;HRun=0;HaplotypeScore=132.9509;InbreedingCoeff=0.7321;MQ=56.87;MQ0=21;MQRankSum=-9.172;QD=8.85;ReadPosRankSum=-1.763;VQSLOD=3.1121;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:99:0,105,1794	0/0:13,0:13:36.12:0,36,631	0/1:28,0:7:0.12:0,0,99	0/0:45,0:11:0.42:0,0,87	0/0:24,0:24:66.22:0,66,1133	0/0:39,0:39:99:0,111,1860	0/0:33,0:33:84.27:0,84,1437	0/0:49,0:48:99:0,129,2229	0/0:19,0:19:54.16:0,54,922	0/0:46,0:45:99:0,117,1992	0/0:31,0:31:75.06:0,75,1300	0/0:19,0:19:57.18:0,57,974	0/0:22,0:22:57.20:0,57,995	0/0:18,0:18:51.17:0,51,889	0/0:34,0:32:93.13:0,93,1566	0/0:30,0:29:18.94:0,19,368	0/0:30,0:30:81.28:0,81,1436	0/0:6,0:5:6.02:0,6,106	1/1:16,5:16:35.86:393,36,0	1/1:21,5:26:41.06:296,41,0	1/1:13,2:12:14.46:125,14,0	0/0:26,0:26:75.26:0,75,1329	0/0:19,0:19:48.15:0,48,805	0/0:33,1:34:69.16:0,69,1152	0/0:23,0:23:63.22:0,63,1096	0/1:24,7:30:27.15:442,0,27	1/1:20,4:22:41.55:242,42,0	0/0:23,3:26:63.54:0,64,1151
chr10	97532909	.	C	CTG	1834.55	PASS	AB=0.857;AC=6;AF=0.107;AN=56;BaseQRankSum=11.258;DP=783;FS=3.217;HRun=0;HaplotypeScore=135.8473;InbreedingCoeff=-0.1051;MQ=58.26;MQ0=20;MQRankSum=-7.044;QD=12.07;ReadPosRankSum=-0.126;VQSLOD=3.5708;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:99:0,108,1650	0/0:13,0:13:36.12:0,36,551	0/1:29,0:8:5.90:6,0,81	0/0:43,0:13:6.31:0,6,64	0/0:25,0:25:69.21:0,69,1012	0/0:40,0:40:99:0,111,1628	0/0:34,0:34:90.25:0,90,1306	0/0:49,0:48:99:0,135,2005	0/0:18,0:18:54.17:0,54,804	0/0:45,0:44:99:0,132,1853	0/0:30,0:30:78.23:0,78,1168	0/0:19,0:19:57.18:0,57,848	0/0:22,0:22:57.19:0,57,871	0/0:18,0:18:51.17:0,51,777	0/0:34,0:32:96.29:0,96,1416	0/0:31,0:30:24.54:0,25,347	0/0:28,0:28:84.26:0,84,1262	0/0:6,0:5:6.02:0,6,92	0/1:22,0:17:56.11:105,0,56	0/1:23,7:28:16.66:511,0,17	0/1:10,5:11:14.40:174,0,14	0/0:27,0:27:78.25:0,78,1173	0/0:22,0:22:51.14:0,51,737	0/0:33,0:33:75.05:0,75,1051	0/0:23,0:23:66.21:0,66,982	0/1:23,9:30:99:621,0,131	0/1:17,6:20:32.18:538,0,32	0/0:26,0:26:25.50:0,26,957
chr10	97532927	.	C	CTCTG	475.18	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=2.655;DP=803;FS=24.500;HRun=0;HaplotypeScore=170.0604;InbreedingCoeff=0.6028;MQ=56.93;MQ0=18;MQRankSum=-1.115;QD=4.24;ReadPosRankSum=1.854;VQSLOD=1.2792;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:67.83:0,68,1835	0/0:12,0:12:36.12:0,36,632	0/0:29,0:8:15.05:0,15,247	0/1:43,0:15:5.07:5,0,163	0/0:31,0:30:78.25:0,78,1325	0/0:42,0:42:99:0,102,1647	0/0:30,0:30:87.24:0,87,1416	0/0:49,0:48:99:0,120,1918	0/0:17,0:17:36.11:0,36,611	0/0:46,0:44:99:0,129,2194	0/0:29,0:29:87.28:0,87,1493	0/0:24,0:24:63.20:0,63,1089	0/0:23,0:23:63.08:0,63,1071	0/0:22,0:22:54.05:0,54,900	0/0:31,0:29:78.27:0,78,1394	1/1:2,35:37:15.05:390,15,0	0/0:33,0:33:81.23:0,81,1371	1/1:6,2:7:8.96:174,9,0	0/0:14,0:10:12.04:0,12,181	0/0:27,0:25:20.68:0,21,516	0/0:20,1:18:33.48:0,33,480	0/0:28,0:28:72.21:0,72,1219	0/0:24,0:24:63.03:0,63,1081	0/0:32,0:32:59.86:0,60,1047	0/0:18,0:18:42.12:0,42,684	0/0:38,0:35:36.54:0,37,997	0/0:24,0:21:12.68:0,13,467	0/1:22,0:22:29.91:30,0,781
chr10	97532973	.	CTCTG	C	1117.36	PASS	AB=0.747;AC=1;AF=0.019;AN=52;BaseQRankSum=3.830;DP=878;FS=1.500;HRun=0;HaplotypeScore=183.0460;InbreedingCoeff=-0.0197;MQ=51.70;MQ0=51;MQRankSum=0.518;QD=18.94;ReadPosRankSum=-2.041;VQSLOD=2.9061;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:39,20:58:99:1192,0,379	0/0:13,0:13:30.05:0,30,607	./.	./.	0/0:42,0:41:99:0,99,2332	0/0:34,0:34:81.28:0,81,1960	0/0:24,0:24:45.14:0,45,1083	0/0:53,0:44:90.31:0,90,2069	0/0:20,0:20:60.21:0,60,1411	0/0:45,0:43:99:0,105,2401	0/0:30,0:30:58.55:0,59,1441	0/0:24,0:24:57.15:0,57,1208	0/0:33,0:32:78.24:0,78,1784	0/0:20,0:20:56:0,56,1278	0/0:28,0:27:66.23:0,66,1601	0/0:38,0:36:36.12:0,36,832	0/0:41,0:41:98.82:0,99,2269	0/0:20,0:19:31.66:0,32,605	0/0:26,0:12:27.04:0,27,496	0/0:26,0:27:50.74:0,51,1174	0/0:30,0:31:50.91:0,51,1101	0/0:32,0:30:63.16:0,63,1392	0/0:29,0:27:54.17:0,54,1154	0/0:38,0:38:72.01:0,72,1652	0/0:24,0:24:63.14:0,63,1369	0/0:45,0:44:99:0,105,2329	0/0:31,0:31:71.49:0,71,1553	0/0:19,0:19:36.12:0,36,812
chr10	97533087	.	GTC	G	893.20	PASS	AB=1.000;AC=10;AF=0.185;AN=54;BaseQRankSum=6.320;DP=784;FS=9.768;HRun=0;HaplotypeScore=134.6365;InbreedingCoeff=0.6827;MQ=49.62;MQ0=49;MQRankSum=-3.902;QD=6.25;ReadPosRankSum=-1.939;VQSLOD=2.4569;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,1:29:36.46:0,36,579	0/0:12,0:12:36.12:0,36,659	./.	0/0:34,0:2:2.90:0,3,16	0/0:34,0:33:93.29:0,93,1634	0/0:29,0:29:81.26:0,81,1442	0/0:34,0:33:90.26:0,90,1484	0/0:53,0:45:99:0,120,2003	0/0:20,0:20:57.19:0,57,1005	0/0:43,0:40:99:0,114,2043	0/0:23,0:23:60.18:0,60,985	0/0:20,0:20:57.20:0,57,1024	0/0:35,0:33:96.26:0,96,1589	0/0:18,0:18:51.17:0,51,889	0/0:26,0:26:72.22:0,72,1268	0/0:10,0:8:12.04:0,12,199	0/0:46,0:46:99:0,123,2069	0/1:28,0:26:27.57:28,0,676	1/1:24,0:9:23.98:213,24,0	1/1:17,0:16:14.82:129,15,0	1/1:25,2:21:6.21:35,6,0	0/0:29,0:29:72.22:0,72,1245	0/0:23,0:23:69.21:0,69,1180	0/0:63,0:61:99:0,156,2720	0/0:25,0:24:72.24:0,72,1246	0/1:30,0:23:98.92:376,0,99	1/1:14,2:14:24.06:272,24,0	0/0:19,0:19:57.19:0,57,999
chr10	97533089	.	C	CTG	1316.54	PASS	AB=0.859;AC=10;AF=0.185;AN=54;BaseQRankSum=5.533;DP=782;FS=8.513;HRun=0;HaplotypeScore=131.9088;InbreedingCoeff=0.6819;MQ=49.82;MQ0=48;MQRankSum=-4.992;QD=9.47;ReadPosRankSum=-1.779;VQSLOD=2.7617;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:26:39.09:0,39,560	0/0:13,0:13:39.12:0,39,574	./.	0/0:33,0:1:2.88:0,3,15	0/0:34,0:33:96.26:0,96,1400	0/0:30,0:30:84.24:0,84,1240	0/0:34,0:33:93.25:0,93,1327	0/0:51,0:43:99:0,123,1793	0/0:19,0:19:57.19:0,57,869	0/0:41,0:38:99:0,114,1737	0/0:24,0:24:60.18:0,60,876	0/0:23,0:23:60.19:0,60,894	0/0:38,0:36:99:0,99,1387	0/0:19,0:19:54.17:0,54,796	0/0:27,0:27:75.71:0,76,1123	0/0:9,0:7:12.03:0,12,183	0/0:46,0:46:99:0,123,1800	0/1:26,2:26:58.68:59,0,585	1/1:17,6:8:24.07:277,24,0	1/1:10,8:16:14.98:139,15,0	1/1:22,3:20:6.01:83,6,0	0/0:28,0:28:72.24:0,72,1090	0/0:23,0:23:69.23:0,69,1032	0/0:66,0:64:99:0,162,2375	0/0:25,0:24:72.24:0,72,1082	0/1:21,8:22:89.24:600,0,89	1/1:12,4:14:24.27:319,24,0	0/0:19,0:19:57.19:0,57,862
chr10	97533093	.	G	GTC	410.09	PASS	AB=0.774;AC=6;AF=0.111;AN=54;BaseQRankSum=8.331;DP=771;FS=8.313;HRun=0;HaplotypeScore=136.9372;InbreedingCoeff=0.4868;MQ=49.86;MQ0=45;MQRankSum=-5.339;QD=5.62;ReadPosRankSum=-0.341;VQSLOD=2.7670;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:26:28.81:0,29,386	0/0:13,0:13:39.13:0,39,557	./.	0/0:32,0:1:2.84:0,3,14	0/0:34,0:33:96.32:0,96,1366	0/0:31,0:31:84.23:0,84,1180	0/0:32,0:31:87.26:0,87,1196	0/0:55,0:46:99:0,129,1688	0/0:19,0:19:51.14:0,51,709	0/0:43,0:40:99:0,108,1547	0/0:24,0:24:60.03:0,60,822	0/0:25,0:25:66.17:0,66,919	0/0:36,0:35:96.32:0,96,1365	0/0:19,0:19:54.17:0,54,753	0/0:27,0:27:72.66:0,73,1003	0/0:9,0:7:9.02:0,9,129	0/0:45,0:45:99:0,108,1519	0/0:26,0:24:30.25:0,30,554	1/1:22,0:7:18.24:88,18,0	0/1:11,5:14:6.31:6,0,7	0/0:22,0:17:3.80:0,4,21	0/0:29,0:29:72.24:0,72,1022	0/0:24,0:24:72.14:0,72,949	0/0:67,0:65:99:0,163,2301	0/0:26,0:25:62.74:0,63,931	0/1:16,6:17:69.03:338,0,69	1/1:13,0:11:1.33:96,1,0	0/0:20,0:20:57.17:0,57,795
chr10	97533095	.	CTG	C	290.97	PASS	AB=0.835;AC=6;AF=0.111;AN=54;BaseQRankSum=8.867;DP=765;FS=0.713;HRun=0;HaplotypeScore=131.3878;InbreedingCoeff=0.5849;MQ=49.78;MQ0=43;MQRankSum=-5.958;QD=4.10;ReadPosRankSum=-0.423;VQSLOD=2.6999;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,2:24:28.47:0,28,460	0/0:13,0:13:39.13:0,39,752	./.	0/0:32,0:1:2.90:0,3,16	0/0:36,0:35:99:0,99,1859	0/0:31,0:31:87.30:0,87,1663	0/0:34,0:32:93.26:0,93,1647	0/0:56,0:46:99:0,135,2422	0/0:19,0:19:54.16:0,54,975	0/0:42,0:39:99:0,114,2170	0/0:23,0:23:60.04:0,60,1063	0/0:25,0:25:72.24:0,72,1325	0/0:37,0:36:99:0,105,1928	0/0:19,0:19:54.17:0,54,990	0/0:27,0:27:72.22:0,72,1351	0/0:7,1:6:9.03:0,9,156	0/0:42,0:42:99:0,108,2023	0/0:26,1:25:9.36:0,9,721	1/1:16,6:7:20.86:155,21,0	0/1:12,4:14:2.19:17,0,2	0/0:14,8:17:4.76:0,5,98	0/0:29,0:29:75.23:0,75,1347	0/0:24,0:24:72.15:0,72,1253	0/0:66,0:64:99:0,166,3129	0/0:26,0:25:72.13:0,72,1283	0/1:17,3:15:98.09:142,0,98	1/1:8,5:11:8.49:106,8,0	0/0:19,0:19:57.20:0,57,1068
chr10	97533165	.	G	GTCTGTC	348.47	PASS	AB=0.957;AC=5;AF=0.089;AN=56;BaseQRankSum=12.122;DP=1084;FS=5.263;HRun=0;HaplotypeScore=273.2701;InbreedingCoeff=0.3266;MQ=51.23;MQ0=51;MQRankSum=0.723;QD=2.81;ReadPosRankSum=6.036;VQSLOD=1.5846;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:67.46:0,67,1277	0/0:13,0:13:30.03:0,30,568	1/1:23,0:4:2.74:12,3,0	0/1:36,0:4:2.15:2,0,3	0/0:38,0:38:96.33:0,96,1966	0/0:33,0:33:81.23:0,81,1701	0/0:30,0:30:77.82:0,78,1547	0/0:49,0:47:99:0,120,2215	0/0:25,0:24:69.22:0,69,1414	0/0:42,0:42:99:0,108,2201	0/0:21,0:21:54.18:0,54,1165	0/0:29,0:29:72.22:0,72,1465	0/0:32,0:32:93.28:0,93,1965	0/0:17,0:17:36.12:0,36,781	0/0:27,0:26:60.18:0,60,1207	0/1:29,5:33:99:268,0,1187	0/0:30,0:30:38.94:0,39,1369	0/1:31,0:29:99:166,0,1090	0/0:57,0:25:52.23:0,52,981	0/0:85,0:84:99:0,136,2927	0/0:72,0:62:99:0,107,2164	0/0:38,0:38:99:0,105,2082	0/0:26,0:26:72.23:0,72,1438	0/0:66,0:63:99:0,137,2691	0/0:23,0:23:60.20:0,60,1265	0/0:88,0:75:99:0,138,2991	0/0:76,0:63:99:0,116,2568	0/0:8,0:7:18.06:0,18,373
chr10	97533169	.	G	GTC	3003.65	PASS	AB=0.822;AC=6;AF=0.107;AN=56;BaseQRankSum=10.439;DP=1086;FS=17.405;HRun=0;HaplotypeScore=192.6870;InbreedingCoeff=-0.0718;MQ=50.70;MQ0=48;MQRankSum=-4.220;QD=7.26;ReadPosRankSum=6.887;VQSLOD=1.6015;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,3:37:65:0,65,922	0/0:12,0:12:33.10:0,33,452	0/0:20,0:3:1.25:0,1,3	0/0:33,0:3:5.92:0,6,43	0/0:36,0:36:96.32:0,96,1368	0/0:34,0:34:84.75:0,85,1202	0/0:31,0:31:73.74:0,74,1065	0/0:50,0:46:99:0,123,1700	0/0:25,0:24:69.23:0,69,987	0/0:42,0:42:99:0,120,1680	0/0:24,0:24:63.21:0,63,886	0/0:28,0:28:75.25:0,75,1059	0/0:32,0:32:93.30:0,93,1312	0/0:16,0:16:36.12:0,36,516	0/0:27,0:26:63.66:0,64,883	0/0:32,2:33:18.80:0,19,841	0/0:29,0:29:63.86:0,64,978	0/1:26,5:29:99:148,0,675	0/1:51,6:25:99:204,0,692	0/1:60,29:87:99:786,0,1910	0/1:51,13:61:99:201,0,1456	0/0:38,0:38:99:0,108,1497	0/0:30,0:30:81.24:0,81,1119	0/0:62,0:59:99:0,138,1922	0/0:23,0:23:60.20:0,60,857	0/1:62,27:77:99:932,0,1960	0/1:56,19:64:99:856,0,1657	0/0:7,0:6:18.06:0,18,247
chr10	97533287	.	CTT	C	479.73	PASS	AB=0.924;AC=4;AF=0.071;AN=56;BaseQRankSum=7.587;DP=915;FS=1.285;HRun=3;HaplotypeScore=199.9724;InbreedingCoeff=0.3749;MQ=51.67;MQ0=38;MQRankSum=-0.763;QD=6.31;ReadPosRankSum=-1.348;VQSLOD=-0.4445;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,2:22:9.60:252,10,0	0/0:16,1:17:35.84:0,36,596	0/0:24,0:5:3.74:0,4,160	0/0:33,0:5:11.73:0,12,176	0/0:38,0:36:85.07:0,85,1500	0/0:23,0:23:49.81:0,50,797	0/0:32,0:31:55.18:0,55,896	0/0:52,0:48:99:0,132,2403	0/0:21,0:21:51.64:0,52,890	0/0:30,0:30:90.30:0,90,1673	0/0:34,0:34:86.06:0,86,1595	0/0:35,0:35:90.25:0,90,1482	0/0:33,0:33:87.27:0,87,1489	0/0:25,0:25:42.94:0,43,701	0/0:47,0:46:87.17:0,87,1535	0/1:20,3:22:27.91:198,0,28	0/0:40,0:39:99:0,104,1730	0/1:26,1:25:99:138,0,165	0/0:31,0:20:56.43:0,56,901	0/0:34,0:33:20.30:0,20,873	0/0:38,1:36:37.18:0,37,1160	0/0:40,0:40:99:0,104,1725	0/0:37,0:36:91.98:0,92,1551	0/0:61,0:60:99:0,140,2218	0/0:28,0:28:72.14:0,72,1249	0/0:41,0:38:92.51:0,93,1718	0/0:31,0:31:79.35:0,79,1328	0/0:13,0:12:35.95:0,36,541
chr10	97533293	.	G	GTC	521.52	PASS	AB=0.981;AC=5;AF=0.089;AN=56;BaseQRankSum=9.695;DP=891;FS=7.393;HRun=0;HaplotypeScore=201.4987;InbreedingCoeff=0.2330;MQ=51.75;MQ0=38;MQRankSum=-3.592;QD=5.16;ReadPosRankSum=-1.782;VQSLOD=2.0910;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:18:9.03:153,9,0	0/0:17,0:17:32.71:0,33,460	0/0:23,0:4:8.62:0,9,91	0/0:31,0:5:1.39:0,1,112	0/0:39,0:37:77.82:0,78,1039	0/0:27,0:27:50.24:0,50,650	0/0:34,0:33:62.49:0,62,721	0/0:47,0:42:99:0,113,1564	0/0:21,0:21:44.83:0,45,623	0/0:29,0:29:81.26:0,81,1143	0/0:33,0:33:72.20:0,72,1028	0/0:36,0:36:87.20:0,87,1197	0/0:35,0:35:84.20:0,84,1152	0/0:25,0:25:44.24:0,44,575	0/0:46,0:45:75.12:0,75,1057	0/1:22,0:21:16.25:195,0,16	0/0:39,0:39:99:0,99,1298	0/1:24,0:22:99:231,0,154	0/0:28,1:19:2.20:0,2,608	0/0:31,0:30:46.41:0,46,531	0/1:31,2:31:58.24:58,0,571	0/0:38,0:38:83.75:0,84,1112	0/0:36,0:34:78.18:0,78,1045	0/0:64,0:63:99:0,132,1804	0/0:25,0:25:63.20:0,63,880	0/0:37,1:35:38.74:0,39,1070	0/0:32,0:31:83.30:0,83,907	0/0:14,0:13:36.12:0,36,488
chr10	97533317	.	GTCTC	G	6902.88	PASS	AB=0.750;AC=43;AF=0.768;AN=56;BaseQRankSum=2.249;DP=847;FS=16.194;HRun=0;HaplotypeScore=206.1608;InbreedingCoeff=0.6098;MQ=51.89;MQ0=37;MQRankSum=0.560;QD=9.65;ReadPosRankSum=2.730;VQSLOD=2.7086;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:17:20.92:128,21,0	1/1:7,10:17:8.21:103,8,0	1/1:7,0:1:2.04:6,2,0	0/0:15,0:1:2.98:0,3,21	1/1:17,26:43:26.45:339,26,0	1/1:8,19:30:14.97:166,15,0	1/1:34,0:35:50.09:496,50,0	1/1:36,0:30:23.53:166,24,0	1/1:10,14:23:14.18:239,14,0	0/0:38,0:39:77.38:0,77,902	0/0:32,0:34:47.80:0,48,904	1/1:15,15:32:29.92:441,30,0	1/1:11,18:29:32.74:529,33,0	1/1:10,19:29:23.87:356,24,0	1/1:18,27:48:23.68:250,24,0	0/1:20,0:23:3.80:70,0,4	1/1:29,6:35:15.09:578,15,0	0/0:24,0:22:33.93:0,34,235	0/1:20,0:22:3.19:143,0,3	1/1:14,0:26:9.42:83,9,0	1/1:25,0:25:11.20:82,11,0	1/1:16,19:35:26.30:324,26,0	1/1:17,15:32:0.17:188,0,0	1/1:44,16:60:98.73:1289,99,0	0/0:15,0:18:32.69:0,33,468	1/1:19,0:27:9.87:244,10,0	1/1:23,0:30:39.35:327,39,0	0/1:5,10:14:14.08:355,0,14
chr10	97533319	.	C	CTG	2058.32	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=4.269;DP=844;FS=11.036;HRun=0;HaplotypeScore=205.2790;InbreedingCoeff=0.6234;MQ=51.82;MQ0=34;MQRankSum=-1.677;QD=6.91;ReadPosRankSum=-3.929;VQSLOD=1.3490;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:19:3.20:174,0,3	0/0:17,0:17:27.81:0,28,217	0/0:6,0:1:0.89:0,1,2	0/0:13,0:1:2.68:0,3,11	0/0:45,0:43:9.96:0,10,342	0/1:30,0:30:24.03:24,0,160	0/0:36,0:35:24.81:0,25,339	0/0:37,0:31:29.26:0,29,301	0/0:23,1:23:35.57:0,36,285	0/0:40,0:39:60.36:0,60,1193	0/0:33,0:33:68.90:0,69,842	0/0:32,0:32:61.60:0,62,465	0/0:30,0:29:65.75:0,66,518	0/0:29,1:29:41.48:0,41,321	0/1:44,0:43:9.09:9,0,333	1/1:23,3:25:12.85:377,13,0	0/0:40,0:37:20.43:0,20,475	0/1:26,0:23:27.44:27,0,94	1/1:27,0:22:9.07:234,9,0	1/1:28,0:25:35.68:267,36,0	1/1:28,1:26:17.75:259,18,0	0/0:35,0:35:59.38:0,59,448	0/0:31,0:30:45.51:0,46,341	0/0:64,0:61:99:0,137,977	0/0:18,0:18:28.54:0,29,484	1/1:29,0:27:25.72:408,26,0	1/1:30,2:28:32.10:466,32,0	0/0:15,0:14:31.63:0,32,233
chr10	97535038	.	CAAA	C	2089.51	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.287;DP=638;FS=1.012;HRun=14;HaplotypeScore=101.2388;InbreedingCoeff=0.9938;MQ=78.32;MQ0=0;MQRankSum=-2.231;QD=18.66;ReadPosRankSum=4.048;VQSLOD=2.8673;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:37:63.21:0,63,965	0/0:7,0:7:18.04:0,18,305	0/0:36,0:27:45.87:0,46,507	0/0:24,0:21:31.32:0,31,297	0/0:32,0:32:84.27:0,84,1484	0/0:21,0:21:57.17:0,57,1026	0/0:17,0:19:48.10:0,48,773	0/0:29,0:29:57.18:0,57,1001	0/0:19,0:22:45.10:0,45,726	0/0:27,0:27:63.20:0,63,1096	0/0:29,0:30:75.21:0,75,1260	0/0:15,0:15:39.13:0,39,695	0/0:22,0:23:48.13:0,48,817	0/0:19,0:19:33.11:0,33,571	0/0:9,0:13:27.06:0,27,427	0/0:18,0:20:45.62:0,46,806	0/0:24,0:24:66.21:0,66,1187	0/0:19,0:19:51.17:0,51,906	1/1:5,9:15:32.88:355,33,0	1/1:9,15:25:37.98:467,38,0	1/1:8,7:16:14.98:175,15,0	0/0:18,0:19:42.11:0,42,711	0/0:13,0:14:36.12:0,36,630	0/0:18,0:20:48.12:0,48,820	0/0:27,0:30:69.19:0,69,1249	1/1:9,24:34:41.08:721,41,0	1/1:5,16:22:46.61:546,47,0	0/0:18,0:20:45.08:0,45,706
chr10	97535875	.	C	CAGT	2501.93	PASS	AB=0.513;AC=3;AF=0.054;AN=56;BaseQRankSum=7.645;DP=635;FS=4.070;HRun=0;HaplotypeScore=90.7215;InbreedingCoeff=0.7562;MQ=95.10;MQ0=0;MQRankSum=-2.797;QD=54.39;ReadPosRankSum=3.124;VQSLOD=6.0978;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,2363	0/0:9,0:9:27.09:0,27,492	0/0:24,0:24:69.24:0,69,1274	0/0:35,0:35:99:0,104,1835	0/0:31,0:31:93.12:0,93,1555	0/0:17,0:17:51.17:0,51,934	0/0:18,0:18:51.16:0,51,918	0/0:36,0:36:99:0,105,1786	0/0:21,0:21:60.17:0,60,1052	0/0:19,0:19:57.16:0,57,1020	0/0:15,0:15:42.13:0,42,751	0/0:22,0:22:63.20:0,63,1123	0/0:19,0:19:57.20:0,57,1059	0/0:16,0:16:45.15:0,45,826	0/0:26,0:26:78.21:0,78,1384	0/1:1,17:20:4.65:1131,0,5	0/0:30,0:30:90.31:0,90,1647	1/1:0,24:26:60.21:1477,60,0	0/0:25,0:25:66.64:0,67,1129	0/0:15,0:15:44.97:0,45,764	0/0:26,0:26:78.14:0,78,1377	0/0:20,0:20:60.14:0,60,1019	0/0:22,0:22:66.23:0,66,1195	0/0:24,0:24:72.19:0,72,1272	0/0:25,0:25:72.18:0,72,1259	0/0:23,0:23:66.23:0,66,1227	0/0:17,0:17:51.11:0,51,889	0/0:10,0:10:27.09:0,27,502
chr10	97536588	.	C	CTGGCAG	3703.69	PASS	AB=0.563;AC=3;AF=0.054;AN=56;BaseQRankSum=-6.927;DP=639;FS=0.638;HRun=0;HaplotypeScore=130.4842;InbreedingCoeff=0.6499;MQ=84.20;MQ0=0;MQRankSum=-10.135;QD=86.13;ReadPosRankSum=0.725;VQSLOD=5.2336;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,2576	0/0:16,0:16:48.16:0,48,1135	0/0:23,0:23:60.18:0,60,1287	0/0:16,0:16:33.08:0,33,627	0/0:24,0:24:63.20:0,63,1443	0/0:16,0:16:48.16:0,48,1132	0/0:32,0:32:93.29:0,93,2147	0/0:20,0:20:45.14:0,45,1016	0/0:19,0:19:54.19:0,54,1277	0/0:26,0:26:78.24:0,78,1693	0/0:21,0:21:63.20:0,63,1439	0/0:25,0:25:75.24:0,75,1679	0/0:20,0:20:57.20:0,57,1338	0/0:25,0:25:72.25:0,72,1702	0/0:27,0:27:78.25:0,78,1796	0/1:4,13:18:22.84:1408,0,23	0/0:42,0:42:99:0,111,2479	1/1:3,21:25:66.23:2296,66,0	0/0:19,0:19:51.13:0,51,1134	0/0:18,0:18:54.19:0,54,1231	0/0:37,0:37:99:0,108,2478	0/0:13,0:13:36.11:0,36,776	0/0:15,0:15:42.14:0,42,993	0/0:28,0:28:75.21:0,75,1697	0/0:19,0:19:57.17:0,57,1257	0/0:27,0:27:81.28:0,81,1827	0/0:14,0:14:42.14:0,42,977	0/0:15,0:15:36.12:0,36,851
chr10	97537218	.	GC	G	1619.65	PASS	AB=0.938;AC=7;AF=0.125;AN=56;BaseQRankSum=11.771;DP=640;FS=15.262;HRun=9;HaplotypeScore=70.0866;InbreedingCoeff=0.8443;MQ=85.31;MQ0=0;MQRankSum=-4.078;QD=17.60;ReadPosRankSum=1.361;VQSLOD=2.5486;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,41:46:99:1016,111,0	0/0:7,0:7:15.04:0,15,173	0/0:24,0:23:43.10:0,43,506	0/0:24,0:24:54.15:0,54,610	0/0:23,0:23:57.17:0,57,657	0/0:18,0:18:51.15:0,51,588	0/0:21,0:20:60.13:0,60,653	0/0:23,0:23:48.12:0,48,536	0/0:20,0:20:57.17:0,57,656	0/0:21,0:21:57.16:0,57,650	0/0:16,0:16:35.83:0,36,404	0/0:30,1:31:53.76:0,54,864	0/0:17,0:17:51.08:0,51,535	0/0:24,0:24:63.17:0,63,714	0/0:25,0:25:72.19:0,72,812	1/1:0,19:19:51.03:467,51,0	0/0:39,0:39:99:0,111,1253	1/1:0,12:12:30.02:275,30,0	0/1:14,1:15:10.10:10,0,207	0/0:29,0:29:78.22:0,78,891	0/0:36,0:36:78.22:0,78,889	0/0:19,1:20:24.04:0,24,517	0/0:23,0:23:66.18:0,66,752	0/0:31,0:31:90.27:0,90,1039	0/0:17,0:17:39.12:0,39,450	0/0:24,0:24:38.74:0,39,700	0/0:23,0:23:66.15:0,66,730	0/0:11,0:11:33.09:0,33,372
chr10	97537594	.	A	AAC	115.13	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=8.498;DP=527;FS=5.103;HRun=0;HaplotypeScore=75.5032;InbreedingCoeff=0.2405;MQ=69.22;MQ0=1;MQRankSum=0.317;QD=1.31;ReadPosRankSum=-1.271;VQSLOD=1.2147;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:3.69:0,4,86	0/0:10,0:10:26.78:0,27,284	0/0:15,0:12:11.08:0,11,246	0/0:12,0:11:19.55:0,20,214	0/0:24,0:24:62.64:0,63,612	0/0:20,0:20:56.92:0,57,591	0/0:14,0:14:23.27:0,23,346	0/0:25,0:25:57.68:0,58,636	0/0:15,0:15:32.51:0,33,295	0/0:32,0:32:65.77:0,66,820	0/0:24,0:24:71.96:0,72,705	0/0:18,0:18:41.76:0,42,364	0/0:17,0:17:41.87:0,42,427	0/0:16,0:16:31.97:0,32,351	0/0:14,0:13:37.01:0,37,355	0/0:1,16:17:2.89:0,3,24	0/0:24,0:24:68.36:0,68,685	1/1:7,0:7:18.35:131,18,0	0/1:11,0:11:7.30:7,0,94	0/1:31,0:31:82.02:82,0,201	0/1:15,0:15:7.05:7,0,36	0/0:27,0:27:61.91:0,62,575	0/0:22,0:22:56.24:0,56,614	0/0:12,0:12:30.08:0,30,357	0/0:28,0:28:72.36:0,72,742	0/1:24,0:24:3.80:4,0,195	0/0:28,0:28:22.59:0,23,300	0/0:14,0:14:38.91:0,39,381
chr10	97538088	.	GGT	G	404.95	PASS	AB=0.957;AC=11;AF=0.212;AN=52;BaseQRankSum=4.274;DP=642;FS=7.760;HRun=0;HaplotypeScore=81.6122;InbreedingCoeff=-0.1163;MQ=60.35;MQ0=16;MQRankSum=0.467;QD=1.67;ReadPosRankSum=1.031;VQSLOD=0.8582;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,3:34:27:262,27,0	0/0:6,0:6:3.01:0,3,33	./.	./.	0/1:18,0:17:26.18:26,0,38	0/1:20,0:19:22.78:23,0,77	0/1:30,2:32:46.52:47,0,107	0/0:27,0:22:3.44:0,3,20	0/0:29,0:29:12.01:0,12,149	0/0:17,0:16:3:0,3,28	0/0:11,0:10:0:0,0,0	0/0:26,0:25:18.04:0,18,241	0/0:19,0:18:9.50:0,10,128	0/0:25,0:24:6.23:0,6,105	0/1:24,3:27:49.45:49,0,97	0/1:15,1:16:26.22:26,0,30	0/0:9,0:18:12:0,12,104	0/1:15,1:16:11.24:11,0,143	0/1:22,0:20:21.96:26,0,22	0/0:16,0:16:11.71:0,12,135	0/0:62,0:58:8.60:0,9,414	0/1:17,0:16:23.91:24,0,38	0/0:16,0:16:6.02:0,6,88	0/1:34,5:39:51.65:52,0,436	0/0:16,0:14:11.95:0,12,138	0/0:34,0:34:6.02:0,6,75	0/0:28,0:28:12.02:0,12,153	0/0:12,0:12:6.46:0,6,65
chr10	97539260	.	A	AT	8890.81	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-14.571;DP=671;FS=12.198;HRun=1;HaplotypeScore=61.4127;InbreedingCoeff=0.9986;MQ=81.95;MQ0=0;MQRankSum=-1.198;QD=40.05;ReadPosRankSum=2.531;VQSLOD=4.6572;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:39:99:1637,111,0	0/0:13,0:13:36.08:0,36,427	0/0:17,0:17:51.16:0,51,649	0/0:20,0:20:48.01:0,48,555	0/0:30,0:30:87.28:0,87,1129	0/0:24,0:24:72.23:0,72,934	0/0:19,0:19:54.16:0,54,687	0/0:26,0:26:72.22:0,72,913	0/0:30,0:30:87.28:0,87,1129	0/0:29,0:29:84.25:0,84,1060	0/0:18,0:18:54.18:0,54,701	0/0:22,0:22:66.21:0,66,856	0/0:22,0:22:63.20:0,63,817	0/0:20,0:20:60.17:0,60,750	0/0:26,0:26:75.20:0,75,930	1/1:1,18:19:45.15:674,45,0	0/0:22,0:22:60.16:0,60,748	1/1:1,19:20:54.18:809,54,0	1/1:1,22:23:69.23:1033,69,0	1/1:0,32:32:90.27:1323,90,0	1/1:2,27:29:69.23:1034,69,0	0/0:23,0:23:69.20:0,69,870	0/0:27,0:27:81.20:0,81,1015	0/0:34,0:34:96.29:0,96,1229	0/0:21,0:21:63.19:0,63,805	1/1:1,23:25:36.31:1034,36,0	1/1:1,34:35:90.30:1347,90,0	0/0:6,0:6:18.06:0,18,234
chr10	97540644	.	A	AACAC	2139.95	PASS	AB=0.835;AC=34;AF=0.654;AN=52;BaseQRankSum=-0.268;DP=638;FS=12.040;HRun=0;HaplotypeScore=131.1066;InbreedingCoeff=0.0092;MQ=65.64;MQ0=10;MQRankSum=1.222;QD=4.36;ReadPosRankSum=-3.468;VQSLOD=0.9235;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:33:17.83:0,18,157	0/1:10,0:10:33.41:33,0,83	./.	./.	0/1:18,1:19:7.34:164,0,7	0/1:20,0:24:21.92:30,0,22	0/1:27,0:28:5.95:6,0,169	1/1:36,0:35:10.37:82,10,0	0/1:14,0:17:3.15:3,0,55	1/1:10,0:16:21.18:189,21,0	1/1:9,0:13:2.74:13,3,0	1/1:12,0:18:2.65:12,3,0	0/1:13,0:18:37.31:37,0,124	0/1:19,0:25:6.71:7,0,18	0/1:17,0:25:13.24:13,0,38	0/1:13,2:24:19.42:71,0,19	0/0:23,0:24:20.08:0,20,247	0/0:13,0:24:20.49:0,20,183	1/1:18,0:18:18.03:339,18,0	1/1:18,0:18:12.03:163,12,0	1/1:25,15:42:6.02:140,6,0	1/1:9,0:14:5.49:25,5,0	0/1:15,0:19:12.96:13,0,79	0/1:17,0:31:25.97:26,0,109	0/1:12,0:14:3.42:3,0,84	1/1:19,4:25:34.79:540,35,0	1/1:22,0:21:21.52:323,22,0	1/1:5,4:10:3.01:70,3,0
chr10	97541089	.	C	CAG	3013.38	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-12.159;DP=748;FS=5.696;HRun=0;HaplotypeScore=87.1964;InbreedingCoeff=0.9996;MQ=85.58;MQ0=0;MQRankSum=-3.047;QD=50.22;ReadPosRankSum=1.004;VQSLOD=4.5192;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,1911	0/0:10,0:10:30.10:0,30,430	0/0:22,0:22:48.03:0,48,668	0/0:25,0:25:66.18:0,66,884	0/0:24,0:24:66.22:0,66,944	0/0:24,0:24:66.22:0,66,946	0/0:28,0:28:84.27:0,84,1182	0/0:23,0:23:66.22:0,66,930	0/0:27,0:27:75.23:0,75,1054	0/0:29,0:29:84.28:0,84,1204	0/0:21,0:21:63.21:0,63,903	0/0:31,0:31:84.26:0,84,1169	0/0:23,0:23:66.22:0,66,944	0/0:23,0:23:66.14:0,66,927	0/0:42,0:42:99:0,123,1729	1/1:1,26:28:78.27:1430,78,0	0/0:30,0:30:90.29:0,90,1272	1/1:0,32:32:93.32:1705,93,0	0/0:18,0:18:39.13:0,39,545	0/0:20,0:20:54.16:0,54,755	0/0:62,0:62:99:0,181,2541	0/0:33,0:33:96.32:0,96,1374	0/0:21,0:21:57.19:0,57,817	0/0:17,0:17:48.16:0,48,688	0/0:21,0:21:63.21:0,63,903	0/0:34,0:34:99:0,99,1403	0/0:24,0:24:66.22:0,66,946	0/0:11,0:11:33.09:0,33,454
chr10	97543323	.	G	GT	1034.52	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.875;DP=617;FS=4.551;HRun=9;HaplotypeScore=66.1922;InbreedingCoeff=0.8567;MQ=71.33;MQ0=0;MQRankSum=-1.933;QD=22.49;ReadPosRankSum=-0.572;VQSLOD=4.3039;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,28:46:99:1129,109,0	0/0:12,0:12:26.98:0,27,234	0/0:16,0:15:20.80:0,21,167	0/0:11,0:10:7.58:0,8,87	0/0:30,1:31:36.24:0,36,522	0/0:15,0:15:41.99:0,42,365	0/0:15,0:15:38.98:0,39,338	0/0:32,1:33:59.26:0,59,497	0/0:16,1:17:8.77:0,9,297	0/0:23,0:23:42.42:0,42,362	0/0:20,0:20:45.32:0,45,380	0/0:16,0:16:41.97:0,42,360	0/0:26,0:26:62.94:0,63,536	0/0:28,0:28:68.84:0,69,594	0/0:20,0:20:53.98:0,54,469	0/0:24,1:25:26.78:0,27,458	0/0:26,0:26:71.97:0,72,625	0/0:9,0:9:23.99:0,24,208	0/0:29,0:29:48.60:0,49,552	0/0:30,0:30:68.93:0,69,592	0/0:16,1:17:14.86:0,15,356	0/0:18,0:18:26.66:0,27,379	0/0:23,0:23:59.87:0,60,504	0/0:19,0:19:53.99:0,54,468	0/0:21,0:21:62.98:0,63,543	0/0:28,0:28:53.94:0,54,469	0/0:29,0:29:83.02:0,83,707	0/0:13,0:13:26.98:0,27,234
chr10	97547992	.	CCACACGAAGG	C	4881.50	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.536;DP=737;FS=3.516;HRun=0;HaplotypeScore=220.5701;InbreedingCoeff=0.9686;MQ=76.71;MQ0=0;MQRankSum=-7.203;QD=40.34;ReadPosRankSum=-0.669;VQSLOD=4.2242;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,120,4607	0/0:18,0:18:51.08:0,51,1921	0/0:15,0:15:36.12:0,36,1301	0/0:15,0:18:37.41:0,37,1175	0/0:26,0:26:63.10:0,63,2001	0/0:25,0:25:69.18:0,69,2797	0/0:44,0:44:99:0,117,4718	0/0:28,0:28:66.19:0,66,2394	0/0:44,0:44:99:0,108,4642	0/0:36,0:36:87.25:0,87,3220	0/0:13,0:13:33.10:0,33,1470	0/0:26,0:26:72.18:0,72,2850	0/0:21,0:21:51.15:0,51,2245	0/0:38,0:38:99:0,105,4235	0/0:25,0:25:54.13:0,54,2181	0/0:33,0:33:96.18:0,96,3248	0/0:32,0:32:93.27:0,93,4179	0/0:19,0:19:51.14:0,51,2186	1/1:6,19:25:56.96:1021,57,0	1/1:5,15:20:38.98:958,39,0	1/1:11,16:27:12.04:336,12,0	0/0:31,0:31:81.14:0,81,3004	0/0:13,0:13:33.01:0,33,974	0/0:37,0:37:99:0,102,4814	0/0:21,0:21:45.13:0,45,2043	1/1:6,19:25:34.06:1157,34,0	1/1:4,20:24:45.15:1410,45,0	0/0:2,0:2:6.02:0,6,233
chr10	97548499	.	ACCACCACGCTGTCCTT	A	1546.79	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.847;DP=759;FS=32.320;HRun=0;HaplotypeScore=334.8562;InbreedingCoeff=0.9998;MQ=76.80;MQ0=1;MQRankSum=-5.913;QD=61.87;ReadPosRankSum=1.215;VQSLOD=1.8638;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,17:25:36.12:1642,36,0	0/0:15,0:15:45.15:0,45,3477	0/0:30,0:28:75.24:0,75,4579	0/0:26,0:26:78.09:0,78,4793	0/0:19,0:19:57.20:0,57,4291	0/0:16,0:16:48.16:0,48,3537	0/0:48,0:48:99:0,141,9674	0/0:27,0:27:81.26:0,81,5408	0/0:30,0:30:87.30:0,87,6646	0/0:28,0:28:81.27:0,81,5615	0/0:15,0:15:45.15:0,45,3305	0/0:32,0:32:96.31:0,96,6669	0/0:23,0:23:66.21:0,66,4531	0/0:27,0:27:78.25:0,78,5635	0/0:38,0:38:99:0,111,7929	0/0:22,0:22:66.23:0,66,4598	0/0:49,0:49:99:0,135,9785	0/0:34,0:34:99:0,99,6045	0/0:22,0:22:54.18:0,54,3444	0/0:27,0:27:75.23:0,75,5237	0/0:41,0:41:99:0,114,7738	0/0:25,0:25:72.25:0,72,5305	0/0:13,0:13:39.13:0,39,2861	0/0:36,0:36:99:0,99,7385	0/0:23,0:23:66.23:0,66,4976	0/0:26,0:26:75.25:0,75,5475	0/0:24,0:24:72.25:0,72,5485	0/0:18,0:18:51.18:0,51,3874
chr10	97549297	.	A	AGTCCT	3734.19	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.727;DP=643;FS=4.841;HRun=0;HaplotypeScore=125.7372;InbreedingCoeff=0.9929;MQ=84.12;MQ0=0;MQRankSum=-10.024;QD=81.18;ReadPosRankSum=1.481;VQSLOD=5.6620;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:20:45.15:1445,45,0	0/0:17,0:17:51.18:0,51,1189	0/0:18,0:18:39.31:0,39,885	0/0:22,0:22:57.12:0,57,1183	0/0:25,0:25:72.23:0,72,1633	0/0:24,0:24:72.25:0,72,1657	0/0:19,0:19:57.20:0,57,1278	0/0:30,0:30:84.28:0,84,1898	0/0:15,0:15:45.15:0,45,1010	0/0:29,0:29:87.30:0,87,2023	0/0:28,0:28:78.27:0,78,1800	0/0:35,0:35:99:0,102,2376	0/0:26,0:26:78.27:0,78,1816	0/0:17,0:17:45.15:0,45,1047	0/0:24,0:24:72.23:0,72,1591	1/1:1,17:18:51.18:1615,51,0	0/0:25,0:25:72.23:0,72,1631	1/1:0,7:8:21.07:674,21,0	0/0:21,0:21:63.20:0,63,1342	0/0:31,0:31:93.30:0,93,2087	0/0:27,0:27:81.28:0,81,1860	0/0:24,0:24:72.25:0,72,1678	0/0:25,0:25:72.25:0,72,1656	0/0:24,0:24:72.25:0,72,1678	0/0:23,0:23:69.24:0,69,1607	0/0:30,0:30:90.30:0,90,2038	0/0:32,0:32:96.32:0,96,2151	0/0:6,0:6:15.05:0,15,350
chr10	97549506	.	C	CTAGAAGTT	4471.26	PASS	AB=0.611;AC=5;AF=0.089;AN=56;BaseQRankSum=0.371;DP=651;FS=2.982;HRun=0;HaplotypeScore=171.6251;InbreedingCoeff=0.7695;MQ=79.41;MQ0=0;MQRankSum=-10.233;QD=91.25;ReadPosRankSum=-1.494;VQSLOD=5.0533;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,7:17:36.08:1164,36,0	0/0:12,0:12:33.11:0,33,909	0/0:24,0:23:66.22:0,66,1678	0/0:17,0:17:42.14:0,42,1121	0/0:34,0:34:99:0,99,2818	0/0:32,0:32:93.32:0,93,2666	0/0:21,0:21:51.14:0,51,1329	0/0:29,0:29:84.28:0,84,2262	0/0:24,0:24:69.21:0,69,1821	0/0:24,0:24:69.22:0,69,1897	0/0:19,0:19:57.20:0,57,1636	0/0:32,0:32:96.33:0,96,2674	0/0:25,0:25:75.26:0,75,2117	0/0:16,0:16:45.15:0,45,1248	0/0:25,0:25:69.24:0,69,1957	0/1:8,10:22:28.98:2105,0,29	0/0:28,0:28:84.26:0,84,2347	1/1:3,6:10:27.09:1202,27,0	0/0:23,0:23:63.20:0,63,1675	0/0:35,0:35:99:0,105,2871	0/0:14,0:14:39.11:0,39,1045	0/0:26,0:26:78.25:0,78,2101	0/0:29,0:29:84.29:0,84,2401	0/0:14,0:14:39.13:0,39,1117	0/0:24,0:24:66.22:0,66,1788	0/0:36,0:36:99:0,108,2988	0/0:35,0:35:99:0,102,2807	0/0:4,0:4:12.04:0,12,344
chr10	97550124	.	C	CAG	1553.06	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.899;DP=712;FS=0.677;HRun=0;HaplotypeScore=81.5038;InbreedingCoeff=0.9981;MQ=89.75;MQ0=0;MQRankSum=-4.358;QD=47.06;ReadPosRankSum=1.349;VQSLOD=5.0252;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1469	0/0:9,0:9:27.09:0,27,378	0/0:31,0:31:79.80:0,80,1060	0/0:30,0:30:89.76:0,90,1160	0/0:31,0:31:90.28:0,90,1240	0/0:27,0:27:72.23:0,72,985	0/0:26,0:26:66.19:0,66,890	0/0:44,0:44:99:0,123,1676	0/0:23,0:23:63.21:0,63,881	0/0:25,0:25:69.23:0,69,965	0/0:23,0:23:69.23:0,69,965	0/0:35,0:35:99:0,102,1428	0/0:23,0:23:60.20:0,60,840	0/0:24,0:24:72.24:0,72,1007	0/0:30,0:29:84.23:0,84,1122	1/1:0,22:23:63.22:1134,63,0	0/0:21,0:21:60.20:0,60,840	1/1:0,10:10:30.10:540,30,0	0/0:20,0:19:57.10:0,57,711	0/0:32,0:32:90.28:0,90,1235	0/0:29,0:29:84.27:0,84,1160	0/0:17,0:17:48.16:0,48,672	0/0:23,0:23:63.21:0,63,881	0/0:34,0:34:81.23:0,81,1093	0/0:12,0:12:36.12:0,36,504	0/0:32,0:32:96.32:0,96,1344	0/0:33,0:33:90.28:0,90,1241	0/0:8,0:8:24.08:0,24,336
chr10	97550335	.	GTT	G	793.74	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=10.076;DP=519;FS=28.475;HRun=14;HaplotypeScore=72.8646;InbreedingCoeff=0.8405;MQ=67.83;MQ0=3;MQRankSum=-1.907;QD=7.63;ReadPosRankSum=4.440;VQSLOD=-0.0839;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,21:31:64.83:572,65,0	0/0:5,0:5:15.05:0,15,210	1/1:15,0:7:1.98:6,2,0	0/1:6,0:5:3.26:3,0,16	0/0:21,0:21:59.85:0,60,790	0/0:22,0:22:60.17:0,60,803	0/0:14,0:16:43.93:0,44,494	0/0:22,1:23:26.37:0,26,613	0/0:25,0:25:60.08:0,60,697	0/0:21,0:24:53:0,53,580	0/0:24,0:24:60.07:0,60,691	0/0:24,0:24:63.05:0,63,722	0/0:19,0:21:48.09:0,48,583	0/0:12,0:13:36.04:0,36,447	0/0:18,0:21:47.09:0,47,544	1/1:25,0:25:52.57:189,53,0	0/0:20,0:22:57.15:0,57,735	1/1:26,0:26:40.88:172,41,0	0/0:14,0:14:36.10:0,36,487	0/0:16,0:20:58.35:0,58,690	0/0:11,0:11:18.04:0,18,220	0/0:12,0:12:30.06:0,30,358	0/0:12,0:14:39.04:0,39,455	0/0:15,0:15:38.95:0,39,465	0/0:13,0:16:39.05:0,39,472	0/0:14,0:17:41.07:0,41,460	0/0:28,0:28:54.13:0,54,676	0/0:5,0:6:11.53:0,12,135
chr10	97550347	.	TTTA	T	1642.38	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=6.792;DP=529;FS=13.652;HRun=0;HaplotypeScore=85.1248;InbreedingCoeff=0.7917;MQ=65.88;MQ0=3;MQRankSum=-1.481;QD=32.20;ReadPosRankSum=2.495;VQSLOD=3.1879;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:68.63:0,69,402	0/0:7,0:7:21.05:0,21,358	0/0:20,0:10:26.50:0,26,218	0/1:6,0:4:10.67:11,0,27	0/0:23,0:23:66.20:0,66,1220	0/0:21,0:21:60.20:0,60,1154	0/0:16,0:16:48.14:0,48,843	0/0:24,0:24:68.87:0,69,1194	0/0:24,0:24:69.21:0,69,1246	0/0:24,0:24:69.10:0,69,1057	0/0:22,0:22:66.14:0,66,1168	0/0:22,0:22:66.13:0,66,1138	0/0:20,0:20:60.13:0,60,970	0/0:14,0:14:42.12:0,42,756	0/0:21,0:20:57.16:0,57,983	1/1:1,22:23:66.15:946,66,0	0/0:26,0:26:75.15:0,75,1291	1/1:8,14:22:65.96:814,66,0	0/0:21,0:21:59.95:0,60,1002	0/0:25,0:25:74.78:0,75,1243	0/0:9,0:9:21.06:0,21,402	0/0:10,0:10:30:0,30,556	0/0:15,0:15:45.14:0,45,828	0/0:15,0:15:42.09:0,42,748	0/0:18,0:18:48.14:0,48,833	0/0:17,0:17:51.15:0,51,873	0/0:18,0:18:54.18:0,54,1079	0/0:13,0:13:38.97:0,39,485
chr10	97550542	.	CA	C	949.23	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.920;DP=510;FS=3.169;HRun=7;HaplotypeScore=52.3818;InbreedingCoeff=0.9911;MQ=83.08;MQ0=0;MQRankSum=-1.818;QD=24.34;ReadPosRankSum=2.438;VQSLOD=4.0174;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.20:0,63,791	0/0:12,0:12:36.10:0,36,440	0/0:19,0:19:48.10:0,48,568	0/0:16,0:14:21.07:0,21,260	0/0:18,0:18:51.16:0,51,641	0/0:17,0:17:48.15:0,48,604	0/0:16,0:16:39.12:0,39,491	0/0:24,0:24:57.18:0,57,717	0/0:14,0:14:39.12:0,39,490	0/0:19,0:19:51.15:0,51,629	0/0:20,0:20:60.19:0,60,755	0/0:18,0:18:45.14:0,45,566	0/0:12,0:12:33.09:0,33,401	0/0:12,0:12:30.08:0,30,361	0/0:25,0:25:75.23:0,75,932	1/1:1,17:18:45.10:459,45,0	0/0:17,0:17:47.36:0,47,573	1/1:1,20:21:60.13:612,60,0	0/0:13,0:13:39.12:0,39,490	0/0:22,0:22:51.15:0,51,630	0/0:8,0:8:18.03:0,18,201	0/0:17,0:17:48.13:0,48,580	0/0:30,0:30:84.27:0,84,1056	0/0:26,0:26:63.20:0,63,787	0/0:19,0:19:54.17:0,54,679	0/0:19,0:19:57.18:0,57,717	0/0:26,0:26:75.23:0,75,930	0/0:8,0:8:21.02:0,21,246
chr10	97551771	.	A	AAGG	1645.59	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.665;DP=681;FS=2.331;HRun=0;HaplotypeScore=110.2449;InbreedingCoeff=0.6898;MQ=70.25;MQ0=4;MQRankSum=-3.126;QD=38.27;ReadPosRankSum=0.741;VQSLOD=4.5750;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,29:43:87.30:1740,87,0	0/0:3,0:3:3.01:0,3,44	0/0:40,0:21:4.59:0,5,536	0/0:48,0:35:40.12:0,40,456	0/0:23,0:23:51.17:0,51,747	0/0:15,0:15:42.14:0,42,612	0/0:22,0:22:57.19:0,57,834	0/0:15,0:15:20.90:0,21,276	0/0:29,0:29:60.19:0,60,844	0/0:30,0:30:78.26:0,78,1141	0/0:14,0:14:27.09:0,27,393	0/0:22,0:22:54.15:0,54,767	0/0:29,0:29:75.25:0,75,1090	0/0:24,0:24:57.19:0,57,834	0/0:31,0:31:69.18:0,69,932	0/0:24,0:24:54.16:0,54,749	0/0:20,0:20:51.17:0,51,740	0/0:28,0:28:63.28:0,63,996	0/0:17,0:15:41.73:0,42,577	0/0:27,0:27:72.23:0,72,1031	0/0:28,0:28:66.22:0,66,966	0/0:14,0:14:33.11:0,33,479	0/0:15,0:15:33.11:0,33,483	0/0:39,0:39:95.99:0,96,1363	0/0:27,0:27:66.22:0,66,961	0/0:21,0:21:48.16:0,48,699	0/0:29,0:29:66.21:0,66,945	0/0:4,0:4:5.19:0,5,86
chr10	97551867	.	GGC	G	1770.83	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.729;DP=666;FS=4.525;HRun=0;HaplotypeScore=96.6944;InbreedingCoeff=0.9803;MQ=61.38;MQ0=2;MQRankSum=-9.797;QD=38.50;ReadPosRankSum=1.838;VQSLOD=5.8597;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.31:0,90,1818	0/0:4,0:4:12.04:0,12,239	0/0:14,1:11:23.87:0,24,463	0/0:24,0:11:21.01:0,21,349	0/0:20,0:20:60.21:0,60,1218	0/0:28,0:28:68.64:0,69,1583	0/0:26,0:26:78.22:0,78,1535	0/0:15,0:15:39.12:0,39,727	0/0:28,0:28:84.29:0,84,1679	0/0:21,0:22:33.10:0,33,1231	0/0:21,0:21:63.20:0,63,1239	0/0:26,0:26:78.25:0,78,1519	0/0:27,0:27:81.26:0,81,1578	0/0:31,0:31:93.32:0,93,1870	0/0:38,0:38:99:0,114,2212	1/1:1,31:32:33.53:1403,34,0	0/0:27,0:26:74.90:0,75,1464	1/1:2,12:14:33.10:490,33,0	0/0:17,0:17:51.18:0,51,1036	0/0:20,0:20:60.21:0,60,1161	0/0:40,0:40:99:0,108,2166	0/0:18,0:18:54.19:0,54,1080	0/0:23,0:23:69.24:0,69,1373	0/0:39,0:39:99:0,117,2302	0/0:30,0:30:90.26:0,90,1681	0/0:26,0:26:78.25:0,78,1526	0/0:16,0:16:45.15:0,45,905	0/0:9,0:9:27.09:0,27,545
chr10	97551958	.	A	AGAG	1375.78	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.310;DP=704;FS=2.510;HRun=0;HaplotypeScore=109.9425;InbreedingCoeff=0.9970;MQ=62.40;MQ0=7;MQRankSum=-0.553;QD=44.38;ReadPosRankSum=1.304;VQSLOD=5.5816;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,19:31:75.20:1471,75,0	0/0:12,0:12:24.06:0,24,347	0/0:40,0:23:38.92:0,39,465	0/0:45,0:26:31.17:0,31,609	0/0:24,0:24:69.15:0,69,964	0/0:15,0:15:45.13:0,45,639	0/0:23,0:23:69.18:0,69,1006	0/0:24,0:23:57.10:0,57,804	0/0:26,0:26:72.20:0,72,1065	0/0:22,0:22:54.18:0,54,832	0/0:19,0:19:54.14:0,54,745	0/0:16,0:16:45.12:0,45,670	0/0:28,0:28:75.22:0,75,1104	0/0:20,0:20:54.13:0,54,763	0/0:24,0:23:66.22:0,66,1011	0/0:23,0:23:63.19:0,63,918	0/0:31,0:31:80.07:0,80,1135	0/0:28,0:28:59.51:0,60,868	0/0:22,0:22:38.08:0,38,663	0/0:15,0:15:35.89:0,36,479	0/0:29,0:29:64.53:0,65,983	0/0:24,0:23:60.19:0,60,902	0/0:22,0:22:54.16:0,54,793	0/0:36,0:36:99:0,99,1443	0/0:19,0:19:48.14:0,48,698	0/0:40,0:40:99:0,105,1614	0/0:29,0:29:78.26:0,78,1205	0/0:13,0:13:33.11:0,33,509
chr10	97552462	.	G	GA	2516.62	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.734;DP=709;FS=4.913;HRun=1;HaplotypeScore=68.2604;InbreedingCoeff=0.9999;MQ=89.06;MQ0=0;MQRankSum=-1.734;QD=41.94;ReadPosRankSum=3.945;VQSLOD=4.2388;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1639	0/0:18,0:18:54.18:0,54,753	0/0:25,0:25:72.24:0,72,996	0/0:27,0:27:75.20:0,75,954	0/0:23,0:23:66.22:0,66,923	0/0:16,0:16:45.15:0,45,628	0/0:35,0:35:99:0,105,1469	0/0:29,0:29:84.27:0,84,1160	0/0:21,0:21:63.21:0,63,881	0/0:26,0:26:75.25:0,75,1040	0/0:16,0:16:48.12:0,48,619	0/0:27,0:27:81.25:0,81,1114	0/0:21,0:21:63.21:0,63,881	0/0:23,0:23:63.21:0,63,879	0/0:29,0:29:87.29:0,87,1217	1/1:1,39:40:99:1679,105,0	0/0:24,0:24:72.21:0,72,987	1/1:0,20:20:60.20:959,60,0	0/0:17,0:16:51.16:0,51,694	0/0:28,0:28:81.27:0,81,1131	0/0:35,0:35:99:0,102,1408	0/0:32,0:32:84.27:0,84,1159	0/0:12,0:12:33.11:0,33,462	0/0:19,0:19:57.19:0,57,795	0/0:24,0:24:69.23:0,69,964	0/0:39,0:39:99:0,117,1621	0/0:24,0:24:72.24:0,72,1007	0/0:19,0:19:57.19:0,57,797
chr10	97554492	.	TG	T	1187.45	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.516;DP=713;FS=0.559;HRun=7;HaplotypeScore=70.8429;InbreedingCoeff=0.9998;MQ=86.87;MQ0=0;MQRankSum=-0.569;QD=22.40;ReadPosRankSum=2.997;VQSLOD=3.6590;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,147,1781	0/0:14,0:14:42.13:0,42,528	0/0:23,0:23:69.22:0,69,862	0/0:26,0:26:39.22:0,39,764	0/0:16,0:16:45.14:0,45,565	0/0:13,0:13:39.11:0,39,475	0/0:30,0:30:84.27:0,84,1055	0/0:32,0:32:81.24:0,81,1001	0/0:23,0:23:60.19:0,60,751	0/0:30,0:30:72.22:0,72,892	0/0:18,0:18:45.61:0,46,564	0/0:29,0:29:84.27:0,84,1048	0/0:35,0:35:90.29:0,90,1132	0/0:29,0:29:84.27:0,84,1057	0/0:33,0:33:90.27:0,90,1105	1/1:3,28:31:46.45:789,46,0	0/0:29,0:29:81.26:0,81,1019	1/1:2,20:22:51.12:520,51,0	0/0:19,0:19:51.14:0,51,616	0/0:20,0:20:54.15:0,54,663	0/0:43,0:43:99:0,120,1509	0/0:28,0:28:75.23:0,75,932	0/0:19,0:19:48.15:0,48,601	0/0:26,0:26:75.18:0,75,913	0/0:16,0:16:48.15:0,48,596	0/0:19,0:19:54.16:0,54,667	0/0:22,1:23:35.60:0,36,761	0/0:14,0:14:42.10:0,42,500
chr10	97555397	.	ATGGGAAC	A	1422.41	PASS	AB=0.540;AC=3;AF=0.054;AN=56;BaseQRankSum=7.638;DP=709;FS=5.792;HRun=0;HaplotypeScore=159.4734;InbreedingCoeff=0.4664;MQ=72.55;MQ0=0;MQRankSum=-6.985;QD=45.88;ReadPosRankSum=0.774;VQSLOD=3.1335;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.23:0,66,2657	0/0:14,0:14:39.13:0,39,1505	0/0:11,0:11:33.11:0,33,1225	0/0:10,0:10:13.64:0,14,563	0/0:29,0:29:84.28:0,84,3214	0/0:33,0:33:99:0,99,3965	0/0:18,0:18:54.13:0,54,1920	0/0:38,0:38:99:0,108,3748	0/0:26,0:26:75.25:0,75,2910	0/0:39,0:39:99:0,111,4265	0/0:34,0:34:96.32:0,96,3677	0/0:21,0:21:60.21:0,60,2378	0/0:32,0:32:96.30:0,96,3603	0/0:23,0:23:63.22:0,63,2540	0/0:27,0:27:81.27:0,81,3040	0/1:4,23:27:60.97:1435,0,61	0/0:19,0:19:51.18:0,51,2055	1/1:3,1:4:3.01:79,3,0	0/0:20,0:20:57.18:0,57,2039	0/0:39,0:39:99:0,117,4517	0/0:25,0:25:75.25:0,75,2769	0/0:37,0:37:99:0,111,4330	0/0:37,0:37:99:0,108,4247	0/0:23,0:23:66.22:0,66,2496	0/0:30,0:30:90.31:0,90,3604	0/0:24,0:24:72.22:0,72,2789	0/0:30,0:29:90.31:0,90,3520	0/0:15,0:15:45.15:0,45,1650
chr10	97555744	.	GA	G	3510.95	PASS	AB=0.889;AC=19;AF=0.339;AN=56;BaseQRankSum=16.053;DP=679;FS=1.026;HRun=11;HaplotypeScore=83.0585;InbreedingCoeff=0.8787;MQ=70.62;MQ0=1;MQRankSum=-0.909;QD=14.57;ReadPosRankSum=2.508;VQSLOD=4.2902;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:23:15.95:337,16,0	0/0:14,0:14:42.10:0,42,441	0/0:17,0:14:1.13:0,1,103	0/0:9,0:6:2.98:0,3,21	0/0:35,2:37:62.40:0,62,834	1/1:5,18:23:56.89:463,57,0	0/1:7,1:8:3.63:4,0,158	0/0:31,0:32:71.94:0,72,716	0/0:28,0:28:69.13:0,69,724	0/0:32,1:33:65.48:0,65,879	0/0:33,0:34:92.96:0,93,940	0/0:26,0:26:63.16:0,63,672	0/0:23,2:26:19.61:0,20,560	0/0:19,0:19:51.11:0,51,535	0/0:25,0:25:44.89:0,45,643	1/1:4,0:27:42.77:124,43,0	0/0:15,1:16:20.47:0,20,423	1/1:4,0:28:44.80:130,45,0	1/1:4,12:17:37.95:296,38,0	1/1:8,30:39:28.24:632,28,0	1/1:2,15:18:43.98:351,44,0	0/0:24,0:24:54.12:0,54,562	0/0:28,0:29:78.01:0,78,800	0/0:26,0:26:72.16:0,72,759	0/0:31,1:32:58.68:0,59,846	1/1:4,35:39:99:837,102,0	1/1:3,16:19:15.96:337,16,0	0/0:10,0:10:27.07:0,27,288
chr10	97556033	.	TGACA	T	1094.31	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.882;DP=848;FS=0.751;HRun=0;HaplotypeScore=164.7531;InbreedingCoeff=0.9241;MQ=68.00;MQ0=2;MQRankSum=-5.058;QD=24.32;ReadPosRankSum=1.744;VQSLOD=3.2628;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:9.78:0,10,122	0/0:10,0:10:24.07:0,24,435	0/0:25,0:13:6.02:0,6,110	0/0:38,0:33:42.14:0,42,620	0/0:28,0:28:60.20:0,60,1101	0/0:15,0:15:39.13:0,39,863	0/0:26,0:26:63.21:0,63,1202	0/0:31,0:31:30.09:0,30,432	0/0:33,0:33:60.20:0,60,1265	0/0:33,0:33:66.22:0,66,1224	0/0:23,0:23:44.63:0,45,813	0/0:37,0:37:75.26:0,75,1636	0/0:21,0:21:42.14:0,42,798	0/0:33,0:33:63.21:0,63,1252	0/0:47,0:47:99:0,114,2408	1/1:19,8:27:42.14:662,42,0	0/0:30,0:30:60.21:0,60,1311	1/1:12,6:18:36.11:553,36,0	0/0:22,0:21:41.50:0,42,498	0/0:30,0:29:58.44:0,58,653	0/0:66,0:65:99:0,118,1666	0/0:19,0:19:42.14:0,42,864	0/0:18,0:18:33.11:0,33,683	0/0:52,0:52:99:0,125,2526	0/0:35,0:35:72.23:0,72,1474	0/0:38,0:38:79.28:0,79,922	0/0:27,0:27:56.79:0,57,772	0/0:19,0:19:42.14:0,42,949
chr10	97556058	.	GAC	G	1218.50	PASS	AB=0.992;AC=10;AF=0.179;AN=56;BaseQRankSum=6.609;DP=803;FS=1.432;HRun=0;HaplotypeScore=129.2895;InbreedingCoeff=0.3723;MQ=56.96;MQ0=14;MQRankSum=-1.410;QD=4.41;ReadPosRankSum=-4.584;VQSLOD=1.4222;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:45,0:45:3.39:16,0,3	0/0:10,0:10:30.10:0,30,508	0/0:15,0:6:18.06:0,18,284	0/0:29,1:22:54.17:0,54,787	0/0:29,0:29:78.27:0,78,1274	0/0:22,0:22:58.43:0,58,990	0/0:31,0:31:84.20:0,84,1368	0/0:34,0:34:96.51:0,97,1212	0/0:29,0:29:81.75:0,82,1379	0/0:27,0:27:72.24:0,72,1193	0/0:17,0:17:41.64:0,42,699	0/0:30,0:30:84.27:0,84,1442	0/0:19,0:19:54.18:0,54,904	0/0:28,0:28:78.25:0,78,1292	0/0:46,0:46:99:0,132,2231	1/1:19,8:27:37.64:274,38,0	0/0:29,0:29:69.34:0,69,1404	1/1:14,3:17:31.44:241,31,0	0/1:27,0:26:3.78:239,0,4	0/1:32,0:30:69.60:97,0,70	0/1:64,1:59:25.84:26,0,283	0/0:19,0:19:54.16:0,54,884	0/0:19,0:17:42.14:0,42,711	0/0:49,0:49:99:0,132,2233	0/0:30,0:30:78.26:0,78,1323	0/1:35,0:34:93.33:444,0,93	0/1:27,1:26:38.83:39,0,119	0/0:14,0:14:39.13:0,39,705
chr10	97556060	.	C	CAG	6696.72	PASS	AB=0.859;AC=13;AF=0.232;AN=56;BaseQRankSum=-11.532;DP=818;FS=1.572;HRun=0;HaplotypeScore=119.4606;InbreedingCoeff=0.6557;MQ=56.93;MQ0=15;MQRankSum=0.966;QD=23.75;ReadPosRankSum=1.872;VQSLOD=5.7808;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,1:49:2.56:127,3,0	0/0:12,0:12:30.10:0,30,458	0/0:16,0:6:18.06:0,18,272	0/0:29,0:22:51.16:0,51,735	0/0:29,0:29:78.26:0,78,1183	0/0:24,0:24:63.18:0,63,915	0/0:32,0:32:87.03:0,87,1275	0/0:37,0:37:99:0,100,1278	0/0:29,0:29:84.29:0,84,1280	0/0:29,0:29:72.24:0,72,1086	0/0:15,0:15:42.13:0,42,621	0/0:30,0:30:85.82:0,86,1266	0/0:20,0:20:57.17:0,57,839	0/0:28,0:28:78.25:0,78,1166	0/0:45,0:45:99:0,132,1972	0/1:26,1:27:99:123,0,171	0/0:30,0:30:66.36:0,66,1255	0/1:17,1:18:99:125,0,130	0/1:13,13:24:99:501,0,155	1/1:4,29:31:52.26:1108,52,0	1/1:4,61:59:99:2199,113,0	0/0:20,0:20:54.14:0,54,796	0/0:20,0:18:42.14:0,42,641	0/0:48,0:48:99:0,132,1952	0/0:30,0:30:78.25:0,78,1172	1/1:5,31:36:50.74:1534,51,0	1/1:1,26:25:47.91:980,48,0	0/0:13,0:13:39.13:0,39,594
chr10	97556076	.	GACACAGAC	G	1749.63	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.926;DP=821;FS=0.000;HRun=0;HaplotypeScore=216.0059;InbreedingCoeff=0.9958;MQ=56.77;MQ0=20;MQRankSum=-4.246;QD=42.67;ReadPosRankSum=0.036;VQSLOD=2.6238;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:42.33:0,42,720	0/0:11,0:11:22.14:0,22,973	0/0:21,0:14:36.59:0,37,752	0/0:32,0:21:47.58:0,48,841	0/0:24,0:24:60.16:0,60,1687	0/0:27,0:27:78.23:0,78,2059	0/0:33,0:33:81.18:0,81,2139	0/0:42,0:42:99:0,121,2488	0/0:27,0:27:72.69:0,73,2323	0/0:24,0:24:63.42:0,63,1686	0/0:15,0:15:35.81:0,36,1010	0/0:32,0:32:90.28:0,90,2672	0/0:23,0:23:54.17:0,54,1583	0/0:25,0:25:66.19:0,66,1998	0/0:45,0:45:99:0,109,3689	1/1:18,6:24:51.12:1008,51,0	0/0:28,0:28:81.23:0,81,2381	1/1:14,3:17:48.05:864,48,0	0/0:26,0:22:20.47:0,20,811	0/0:31,0:29:51.14:0,51,1119	0/0:71,0:65:99:0,132,3495	0/0:25,0:25:63.20:0,63,1647	0/0:26,0:24:54.18:0,54,1467	0/0:40,0:41:99:0,114,3689	0/0:32,0:32:90.10:0,90,2587	0/0:32,0:31:40.10:0,40,1438	0/0:27,0:25:51.09:0,51,1419	0/0:14,0:14:42.08:0,42,1551
chr10	97556082	.	GAC	G	724.73	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.338;DP=796;FS=1.553;HRun=0;HaplotypeScore=124.5070;InbreedingCoeff=0.9969;MQ=57.19;MQ0=21;MQRankSum=-5.636;QD=18.58;ReadPosRankSum=2.380;VQSLOD=3.7733;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:40.46:0,40,681	0/0:11,0:11:30.10:0,30,499	0/0:25,0:16:39.57:0,40,605	0/0:34,0:21:53.58:0,54,728	0/0:21,0:21:48.16:0,48,802	0/0:27,0:27:69.24:0,69,1142	0/0:28,0:28:69.16:0,69,1138	0/0:45,0:45:99:0,111,1706	0/0:26,0:26:63.67:0,64,1010	0/0:27,0:27:30.67:0,31,998	0/0:15,0:15:32.62:0,33,538	0/0:31,0:31:81.25:0,81,1291	0/0:18,0:18:51.16:0,51,827	0/0:24,0:24:63.20:0,63,1010	0/0:40,1:41:63.48:0,63,1580	1/1:8,14:22:39.12:471,39,0	0/0:30,0:30:75.19:0,75,1162	1/1:8,9:17:30.29:375,30,0	0/0:26,0:22:60.05:0,60,867	0/0:25,0:23:42.10:0,42,625	0/0:72,0:66:99:0,120,1891	0/0:23,1:24:21.60:0,22,874	0/0:24,0:22:57.17:0,57,889	0/0:40,0:40:93.24:0,93,1478	0/0:32,0:32:84.02:0,84,1310	0/0:28,1:28:30.53:0,31,880	0/0:23,0:21:39.13:0,39,645	0/0:14,0:14:42.08:0,42,662
chr10	97557654	.	AC	A	1221.25	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.806;DP=678;FS=0.673;HRun=1;HaplotypeScore=65.0233;InbreedingCoeff=0.9838;MQ=94.55;MQ0=0;MQRankSum=-3.124;QD=35.92;ReadPosRankSum=2.728;VQSLOD=3.9824;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1844	0/0:9,0:9:27.09:0,27,432	0/0:28,0:28:84.28:0,84,1296	0/0:32,0:32:93.25:0,93,1403	0/0:32,0:32:93.28:0,93,1429	0/0:22,0:22:66.21:0,66,1031	0/0:17,0:17:51.16:0,51,791	0/0:40,0:40:99:0,117,1848	0/0:30,0:30:90.29:0,90,1408	0/0:26,0:26:78.25:0,78,1224	0/0:24,0:24:72.22:0,72,1100	0/0:24,0:24:72.23:0,72,1127	0/0:22,0:22:66.21:0,66,1032	0/0:15,0:15:45.15:0,45,714	0/0:39,0:39:99:0,117,1868	1/1:0,18:18:54.18:755,54,0	0/0:34,0:34:99:0,102,1607	1/1:0,16:16:42.14:587,42,0	0/0:18,0:18:54.16:0,54,813	0/0:20,0:20:60.20:0,60,953	0/0:27,0:27:81.28:0,81,1291	0/0:18,0:18:54.15:0,54,815	0/0:19,0:19:57.17:0,57,886	0/0:27,0:27:78.27:0,78,1244	0/0:24,0:24:72.25:0,72,1151	0/0:27,0:27:81.26:0,81,1271	0/0:26,0:26:78.27:0,78,1245	0/0:4,0:4:12.04:0,12,192
chr10	97558184	.	G	GTGTGT	721.07	PASS	AB=0.929;AC=9;AF=0.161;AN=56;BaseQRankSum=5.469;DP=476;FS=7.170;HRun=0;HaplotypeScore=120.5673;InbreedingCoeff=0.6351;MQ=45.44;MQ0=30;MQRankSum=-1.664;QD=9.36;ReadPosRankSum=-1.686;VQSLOD=1.6215;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:23:14.66:426,15,0	0/0:7,0:7:14.12:0,14,195	0/0:12,0:6:15.04:0,15,232	0/0:7,0:2:3.01:0,3,35	0/0:17,0:20:36.59:0,37,812	0/0:14,0:13:24.88:0,25,186	0/0:20,0:20:37.23:0,37,624	0/0:20,0:18:47.01:0,47,578	0/0:15,0:16:41.86:0,42,906	0/0:29,0:25:74.61:0,75,1214	0/0:10,0:16:21.03:0,21,436	0/0:21,0:18:29.54:0,30,578	0/0:19,0:19:29.43:0,29,558	0/0:17,0:15:31.39:0,31,509	0/0:18,0:18:35.63:0,36,605	1/1:1,2:15:7.97:98,8,0	0/0:26,0:27:73.91:0,74,1028	1/1:3,0:7:6.02:81,6,0	0/0:15,0:14:1.90:0,2,224	1/1:10,0:11:2.20:81,2,0	0/0:9,0:7:5.74:0,6,65	0/0:18,0:17:20.79:0,21,460	0/0:16,0:16:13.11:0,13,418	0/0:29,0:34:47.81:0,48,846	0/0:15,0:15:23.54:0,24,378	0/1:12,0:12:99:175,0,167	0/0:11,0:8:20.16:0,20,180	0/0:9,0:8:21.07:0,21,401
chr10	97558233	.	GAT	G	1964.32	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=1.486;DP=601;FS=3.085;HRun=0;HaplotypeScore=97.6724;InbreedingCoeff=0.9716;MQ=68.50;MQ0=17;MQRankSum=-1.358;QD=14.34;ReadPosRankSum=-1.048;VQSLOD=3.4950;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:32.76:248,33,0	0/0:8,0:8:8.12:0,8,125	0/0:27,0:18:53.82:0,54,533	0/0:32,0:22:46.20:0,46,502	0/0:18,0:18:32.93:0,33,265	0/0:19,0:19:37.21:0,37,342	0/0:37,0:37:86.83:0,87,802	0/0:31,0:31:80.92:0,81,702	0/0:17,0:17:40.88:0,41,338	0/0:36,0:33:83.18:0,83,799	0/0:19,0:19:35.90:0,36,299	0/0:22,0:21:44.84:0,45,457	0/0:18,0:17:23.44:0,23,215	0/0:21,0:20:50.95:0,51,486	0/0:23,0:23:53.98:0,54,524	1/1:23,0:22:40.64:340,41,0	0/0:20,0:20:35.04:0,35,600	1/1:12,1:10:6.97:173,7,0	1/1:18,0:17:42.59:356,43,0	1/1:13,5:18:26.76:222,27,0	1/1:15,0:15:33.91:308,34,0	0/0:17,0:17:35.84:0,36,296	0/0:29,0:29:56.77:0,57,475	0/0:32,0:30:44.93:0,45,465	0/0:24,0:24:45.22:0,45,395	1/1:17,0:17:25.84:296,26,0	1/1:13,0:12:26.85:225,27,0	0/0:14,0:13:20.16:0,20,134
chr10	97559441	.	GAATTCTTA	G	1873.86	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.913;DP=750;FS=8.176;HRun=0;HaplotypeScore=185.1600;InbreedingCoeff=0.9682;MQ=79.75;MQ0=0;MQRankSum=-7.725;QD=52.05;ReadPosRankSum=1.975;VQSLOD=3.0331;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,154,6432	0/0:12,0:12:33.11:0,33,1315	0/0:24,0:24:69.21:0,69,2313	0/0:23,0:23:9.08:0,9,1304	0/0:24,0:24:66.21:0,66,2652	0/0:23,0:23:69.24:0,69,3018	0/0:27,0:27:75.26:0,75,3189	0/0:27,0:27:72.24:0,72,2944	0/0:25,0:25:69.22:0,69,2779	0/0:33,0:33:96.33:0,96,4034	0/0:17,0:17:51.18:0,51,2204	0/0:33,0:33:90.31:0,90,3804	0/0:26,0:26:69.24:0,69,2971	0/0:33,0:33:84.29:0,84,3570	0/0:32,0:32:96.32:0,96,4037	1/1:4,19:23:51.18:1413,51,0	0/0:21,0:21:63.22:0,63,2756	1/1:5,8:12:20.65:581,21,0	0/0:26,0:26:78.27:0,78,3269	0/0:40,0:40:99:0,108,4609	0/0:20,0:20:54.19:0,54,2284	0/0:25,0:25:63.22:0,63,2739	0/0:24,0:24:69.24:0,69,2967	0/0:29,0:29:84.29:0,84,3393	0/0:27,0:27:81.28:0,81,3465	0/0:40,0:40:99:0,111,4838	0/0:39,0:39:99:0,108,4629	0/0:9,0:9:27.09:0,27,931
chr10	97561171	.	C	CCTG	10163.06	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=3.977;DP=762;FS=10.934;HRun=0;HaplotypeScore=118.1095;InbreedingCoeff=0.9932;MQ=77.02;MQ0=0;MQRankSum=-5.173;QD=54.64;ReadPosRankSum=0.211;VQSLOD=6.4923;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,39:41:99:2377,105,0	0/0:9,0:9:24.05:0,24,372	0/0:18,0:18:50.71:0,51,778	0/0:16,0:16:29.68:0,30,463	0/0:21,0:21:57.16:0,57,890	0/0:24,0:24:66.23:0,66,1083	0/0:26,0:26:75.26:0,75,1250	0/0:34,0:34:93.29:0,93,1455	0/0:28,0:28:78.24:0,78,1257	0/0:32,0:32:90.31:0,90,1496	0/0:18,0:18:51.12:0,51,750	0/0:38,0:38:99:0,114,1873	0/0:27,0:27:78.27:0,78,1299	0/0:35,0:35:96.30:0,96,1594	0/0:29,0:29:87.30:0,87,1449	0/0:36,0:36:99:0,108,1770	0/0:32,0:31:93.32:0,93,1545	0/0:35,0:34:99:0,102,1699	1/1:8,7:15:30.10:606,30,0	1/1:0,23:25:63.22:1398,63,0	1/1:3,38:42:99:2246,100,0	0/0:25,0:25:66.23:0,66,1094	0/0:22,0:22:60.19:0,60,973	0/0:43,0:43:99:0,123,1998	0/0:24,0:24:69.22:0,69,1123	1/1:5,29:36:99:2118,99,0	1/1:2,25:27:63.22:1417,63,0	0/0:4,0:4:12.04:0,12,200
chr10	97561281	.	GTCTCTCACTAA	G	14483.69	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.886;DP=682;FS=0.000;HRun=0;HaplotypeScore=226.7377;InbreedingCoeff=0.9956;MQ=84.17;MQ0=0;MQRankSum=-16.111;QD=76.23;ReadPosRankSum=1.337;VQSLOD=4.6061;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:33:60.21:2086,60,0	0/0:15,0:15:45.15:0,45,2187	0/0:20,0:20:57.20:0,57,2733	0/0:25,0:27:15.64:0,16,2329	0/0:24,0:24:69.22:0,69,3547	0/0:24,0:24:63.22:0,63,3545	0/0:22,0:22:63.22:0,63,3535	0/0:22,0:22:60.21:0,60,3130	0/0:29,0:29:84.29:0,84,4579	0/0:21,0:21:60.21:0,60,3373	0/0:22,0:22:63.22:0,63,3341	0/0:30,0:30:87.27:0,87,4592	0/0:29,0:29:87.30:0,87,4678	0/0:27,0:27:81.28:0,81,4324	0/0:38,0:38:99:0,111,6021	1/1:3,27:30:63.22:2222,63,0	0/0:39,0:39:99:0,111,6197	1/1:3,17:20:39.13:1376,39,0	1/1:1,13:14:39.12:1246,39,0	1/1:2,21:23:60.13:1935,60,0	1/1:5,10:15:18.06:635,18,0	0/0:24,0:24:72.23:0,72,3385	0/0:25,0:25:72.25:0,72,3971	0/0:30,0:30:81.28:0,81,4429	0/0:17,0:17:51.18:0,51,2691	1/1:1,30:31:90.31:3077,90,0	1/1:2,22:24:54.66:1905,55,0	0/0:7,0:7:21.07:0,21,1161
chr10	97562407	.	G	GAA	207.70	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=3.068;DP=568;FS=3.249;HRun=2;HaplotypeScore=93.4151;InbreedingCoeff=0.7978;MQ=69.11;MQ0=8;MQRankSum=0.216;QD=4.72;ReadPosRankSum=-1.016;VQSLOD=-0.7197;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:53.69:0,54,533	0/0:12,0:11:23.74:0,24,189	0/0:17,0:12:19.49:0,19,248	0/0:28,0:19:39.53:0,40,373	0/0:19,0:19:35.64:0,36,288	0/0:17,0:17:44.85:0,45,359	0/0:10,0:10:29.81:0,30,264	0/0:41,0:40:98.65:0,99,874	0/0:13,0:13:20.94:0,21,201	0/0:23,0:23:50.93:0,51,523	0/0:18,0:17:44.88:0,45,402	0/0:13,0:13:32.67:0,33,249	0/0:23,0:23:52.85:0,53,403	0/0:22,0:22:41.14:0,41,369	0/0:24,0:24:53.70:0,54,523	1/1:2,19:21:11.86:112,12,0	0/1:13,0:12:5.15:5,0,139	1/1:10,0:10:24.46:211,24,0	0/0:21,0:20:44.49:0,44,365	0/0:19,0:19:35.60:0,36,284	0/0:56,0:55:72.03:0,72,810	0/0:13,0:13:29.95:0,30,246	0/0:12,0:12:26.68:0,27,223	0/0:22,0:19:35.56:0,36,322	0/0:16,0:16:38.90:0,39,318	0/0:24,0:24:65.87:0,66,594	0/0:22,0:22:24.77:0,25,253	0/0:7,0:6:17.94:0,18,143
chr10	97564302	.	TGCGC	T	388.91	PASS	AB=0.965;AC=9;AF=0.161;AN=56;BaseQRankSum=5.192;DP=333;FS=3.288;HRun=0;HaplotypeScore=75.5196;InbreedingCoeff=0.4702;MQ=80.10;MQ0=2;MQRankSum=-2.502;QD=3.93;ReadPosRankSum=-1.842;VQSLOD=1.1351;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:19.45:0,19,211	0/0:3,0:3:6.02:0,6,121	0/1:21,0:15:13.25:13,0,58	0/1:23,0:18:11.47:11,0,126	0/0:9,0:9:14.90:0,15,243	0/0:15,0:15:42.14:0,42,925	0/0:19,0:20:22.47:0,22,1001	0/0:17,0:17:39:0,39,683	0/0:11,0:11:27.09:0,27,572	0/0:12,0:12:24.07:0,24,548	0/0:5,0:5:15.05:0,15,303	0/0:11,0:11:27.09:0,27,588	0/0:5,0:5:15.04:0,15,327	0/0:6,0:6:17.95:0,18,379	0/0:8,0:8:15.05:0,15,318	0/0:13,0:13:22.61:0,23,307	0/0:12,0:12:30.09:0,30,587	0/0:22,0:21:47.83:0,48,559	1/1:3,7:10:17.99:215,18,0	0/1:8,0:8:4.16:21,0,4	1/1:15,0:15:9.89:97,10,0	0/0:9,0:9:27.08:0,27,571	0/0:6,0:6:15.04:0,15,338	0/0:17,0:17:48.16:0,48,1118	0/0:9,0:9:27.09:0,27,619	0/1:7,0:6:1.71:94,0,2	0/1:7,0:7:1.60:84,0,2	0/0:2,0:2:6.02:0,6,111
chr10	97564326	.	CTCT	C	573.73	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.092;DP=349;FS=6.836;HRun=0;HaplotypeScore=53.6142;InbreedingCoeff=0.5761;MQ=49.96;MQ0=39;MQRankSum=-1.136;QD=23.91;ReadPosRankSum=-1.456;VQSLOD=2.4121;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:21.47:0,21,515	0/0:3,0:3:5.98:0,6,79	0/0:57,0:11:14.31:0,14,212	0/0:48,0:11:7.83:0,8,196	0/0:7,0:7:14.84:0,15,276	0/0:17,0:16:45.14:0,45,920	0/0:19,0:19:44.95:0,45,937	0/0:20,0:15:34.44:0,34,688	0/0:7,0:7:17.80:0,18,379	0/0:8,0:7:18.06:0,18,412	0/0:4,0:4:9.03:0,9,213	0/0:8,0:7:20.81:0,21,398	0/0:5,0:4:12.04:0,12,254	0/0:5,0:5:15.05:0,15,339	0/0:5,0:5:12.03:0,12,241	1/1:0,5:5:3.01:53,3,0	0/0:8,0:8:23.81:0,24,468	1/1:19,0:18:41.05:629,41,0	0/0:11,0:7:18.03:0,18,275	0/0:10,0:8:4.43:0,4,122	0/0:11,0:10:12.02:0,12,189	0/0:9,0:8:21.07:0,21,465	0/0:5,0:4:12.04:0,12,287	0/0:15,0:15:39.13:0,39,847	0/0:10,0:9:21.07:0,21,484	0/0:5,0:3:6.02:0,6,120	0/0:4,0:3:6.02:0,6,123	0/0:2,0:2:6.02:0,6,122
chr10	97564332	.	C	CT	279.03	PASS	AB=1.000;AC=5;AF=0.096;AN=52;BaseQRankSum=5.738;DP=317;FS=14.607;HRun=1;HaplotypeScore=38.4938;InbreedingCoeff=0.4761;MQ=46.43;MQ0=51;MQRankSum=-3.996;QD=13.95;ReadPosRankSum=0.320;VQSLOD=1.1041;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,7:13:24.46:308,24,0	0/0:2,0:2:3.01:0,3,39	0/0:55,0:9:8.88:0,9,90	0/0:45,0:9:14.73:0,15,176	0/0:7,0:7:15.04:0,15,188	0/0:18,0:16:36.12:0,36,499	0/0:17,0:16:30.81:0,31,454	0/0:17,0:12:26.82:0,27,339	0/0:7,0:6:18.05:0,18,236	0/0:9,0:7:18.06:0,18,249	0/0:4,0:4:9.03:0,9,126	0/0:7,0:6:15.04:0,15,194	0/0:4,0:3:9.02:0,9,106	0/0:5,0:5:15.05:0,15,209	0/0:4,0:4:9.03:0,9,125	0/0:5,0:5:3.01:0,3,35	0/0:9,0:8:7.61:0,8,213	0/0:18,0:16:41.12:0,41,515	0/0:5,0:1:3.01:0,3,36	0/0:6,0:3:0.83:0,1,2	./.	0/0:10,0:9:18.06:0,18,251	0/0:6,0:4:12.04:0,12,166	0/0:16,0:15:32.79:0,33,452	0/0:10,0:8:18.06:0,18,251	./.	1/1:1,2:2:6.01:70,6,0	0/1:3,0:3:17.83:18,0,35
chr10	97564335	.	C	CT	188.85	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=5.420;DP=322;FS=22.554;HRun=1;HaplotypeScore=35.3386;InbreedingCoeff=0.5144;MQ=43.28;MQ0=61;MQRankSum=-3.839;QD=11.11;ReadPosRankSum=1.050;VQSLOD=-0.0491;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,6:13:12.53:243,13,0	0/0:3,0:3:3.01:0,3,42	0/0:54,0:8:9.03:0,9,126	0/0:43,0:8:15:0,15,206	0/0:6,0:6:12.04:0,12,168	0/0:19,0:16:42.14:0,42,584	0/0:16,0:15:34.93:0,35,466	0/0:16,0:11:33.10:0,33,439	0/0:7,0:6:18.06:0,18,254	0/0:10,0:7:18.05:0,18,238	0/0:4,0:4:9.03:0,9,126	0/0:10,0:7:18.02:0,18,232	0/0:2,0:1:2.98:0,3,22	0/0:5,0:5:15.05:0,15,208	0/0:4,0:4:9.03:0,9,124	0/0:5,0:5:3.01:0,3,42	0/0:10,0:8:11.16:0,11,256	0/0:18,0:16:41.15:0,41,584	0/0:6,0:1:3.01:0,3,40	0/0:7,0:4:1.76:0,2,5	./.	0/0:12,0:10:24.04:0,24,311	0/0:5,0:3:9.03:0,9,126	0/0:16,0:15:33.26:0,33,457	0/0:11,0:9:18.06:0,18,252	./.	1/1:1,2:2:5.99:49,6,0	0/0:3,0:2:6.02:0,6,82
chr10	97564338	.	C	CT	237.92	PASS	AC=4;AF=0.080;AN=50;BaseQRankSum=5.287;DP=318;FS=26.953;HRun=1;HaplotypeScore=36.9128;InbreedingCoeff=0.5108;MQ=42.85;MQ0=66;MQRankSum=-3.700;QD=13.22;ReadPosRankSum=0.286;VQSLOD=0.6700;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,4:13:6.36:267,6,0	0/0:3,0:3:8.98:0,9,101	0/0:49,0:7:8.98:0,9,124	0/0:42,0:8:14.75:0,15,201	0/0:7,0:7:15.05:0,15,207	0/0:20,0:17:42.13:0,42,568	0/0:17,0:15:38.45:0,38,489	0/0:14,0:9:27.09:0,27,377	0/0:6,0:5:15.05:0,15,210	0/0:10,0:6:15.04:0,15,197	0/0:4,0:4:9.03:0,9,124	0/0:9,0:6:15.05:0,15,201	./.	0/0:4,0:4:12.02:0,12,150	0/0:7,0:4:6.02:0,6,84	0/0:5,0:5:3.01:0,3,42	0/0:9,0:7:21.07:0,21,281	0/0:20,0:18:44.82:0,45,645	0/0:6,0:1:3.01:0,3,42	0/0:7,0:4:2.89:0,3,18	./.	0/0:12,0:10:27.05:0,27,351	0/0:5,0:3:9.02:0,9,109	0/0:15,0:14:30.20:0,30,393	0/0:12,0:10:18.05:0,18,252	./.	1/1:1,2:2:6.01:69,6,0	0/0:3,0:2:6.02:0,6,84
chr10	97564384	.	TTCC	T	155.19	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=0.403;DP=242;FS=3.834;HRun=0;HaplotypeScore=35.4794;InbreedingCoeff=0.6644;MQ=61.86;MQ0=29;MQRankSum=0.708;QD=9.70;ReadPosRankSum=-0.294;VQSLOD=2.2288;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:45.58:0,46,642	0/0:6,0:6:12.03:0,12,218	0/0:10,0:6:17.61:0,18,240	0/0:10,0:6:9.25:0,9,66	0/0:14,0:14:38.92:0,39,670	0/0:14,0:12:30.09:0,30,532	0/0:11,0:8:21.07:0,21,363	0/0:5,0:5:15.04:0,15,239	0/0:5,0:5:11.95:0,12,193	0/0:4,0:2:6.02:0,6,102	0/0:6,0:6:18.06:0,18,300	0/0:6,0:4:9.03:0,9,136	0/0:6,0:4:11.83:0,12,128	0/0:4,0:4:9.03:0,9,139	0/0:7,0:3:9.03:0,9,149	0/0:8,0:6:15.02:0,15,162	0/0:13,0:11:31.73:0,32,397	0/0:19,0:17:30.94:0,31,404	1/1:7,0:4:2.68:45,3,0	1/1:1,0:1:3.01:44,3,0	./.	0/0:11,0:11:27.02:0,27,441	0/0:6,0:5:8.66:0,9,151	0/0:15,0:14:28.61:0,29,477	0/0:7,0:7:20.56:0,21,323	1/1:2,3:4:9.02:104,9,0	1/1:3,0:3:2.26:84,2,0	0/0:6,0:5:12.93:0,13,207
chr10	97566209	.	CT	C	1946.69	PASS	AB=0.955;AC=12;AF=0.214;AN=56;BaseQRankSum=13.137;DP=516;FS=5.202;HRun=11;HaplotypeScore=63.8259;InbreedingCoeff=0.7862;MQ=77.89;MQ0=0;MQRankSum=-0.315;QD=13.81;ReadPosRankSum=0.638;VQSLOD=3.8018;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.16:0,78,814	0/0:7,0:8:17.90:0,18,167	0/0:19,0:17:19.40:0,19,159	0/1:23,0:15:9.68:10,0,40	0/0:33,0:33:90.08:0,90,935	0/0:15,0:15:39.10:0,39,416	0/0:7,0:7:15.04:0,15,160	0/0:25,0:26:55.89:0,56,605	0/0:9,0:9:21.03:0,21,214	0/0:22,0:22:48.10:0,48,501	0/0:16,0:16:44.99:0,45,435	0/0:17,0:17:48.02:0,48,496	0/0:13,0:13:24.04:0,24,243	0/1:9,1:10:0.58:1,0,200	0/0:11,0:11:27.05:0,27,273	0/0:18,1:19:32.51:0,33,544	0/0:33,1:35:65.38:0,65,869	0/0:26,0:26:60.07:0,60,610	1/1:4,25:29:73.73:562,74,0	1/1:6,14:20:49.34:382,49,0	1/1:3,7:10:23.96:195,24,0	0/0:9,0:9:18.03:0,18,184	0/0:13,1:14:2.42:0,2,231	0/0:6,0:6:18.03:0,18,183	0/0:14,2:16:9.08:0,9,323	1/1:4,23:28:41.89:530,42,0	1/1:2,19:21:53.93:443,54,0	0/0:24,0:24:60.01:0,60,591
chr10	97566335	.	GGTATGTAT	G	2108.67	PASS	AB=0.702;AC=10;AF=0.185;AN=54;BaseQRankSum=5.646;DP=682;FS=6.839;HRun=0;HaplotypeScore=182.3113;InbreedingCoeff=0.6572;MQ=69.88;MQ0=1;MQRankSum=-7.317;QD=14.96;ReadPosRankSum=-1.118;VQSLOD=1.9733;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:72.67:0,73,1852	0/0:12,0:12:21.06:0,21,717	./.	0/0:18,0:16:3.01:0,3,45	0/0:24,0:24:51.16:0,51,1882	0/0:20,0:20:27.06:0,27,908	0/0:12,0:13:30.09:0,30,1022	0/0:38,0:37:33.10:0,33,834	0/0:18,0:18:27.09:0,27,998	0/0:32,0:33:39.12:0,39,1381	0/0:16,0:30:30.76:0,31,1067	0/0:22,0:22:51.18:0,51,2088	0/0:20,0:20:30.10:0,30,1162	0/0:21,0:21:42.13:0,42,1610	0/0:32,0:32:39.13:0,39,1593	0/1:11,4:20:73.82:256,0,74	0/0:31,0:31:54.18:0,54,1835	0/0:29,0:29:48.11:0,48,1763	1/1:16,4:20:17.27:376,17,0	1/1:11,12:23:12:229,12,0	1/1:26,4:30:3.01:71,3,0	0/0:19,0:19:18.06:0,18,737	0/0:25,0:25:29.31:0,29,1111	0/0:22,0:22:33.10:0,33,1098	0/0:19,0:19:21.06:0,21,763	0/1:12,8:20:95.78:568,0,96	1/1:14,14:26:33.07:765,33,0	0/0:22,0:22:36.10:0,36,1166
chr10	97567458	.	GGAGAGAGAGAGAGA	G	401.93	PASS	AB=0.902;AC=7;AF=0.135;AN=52;BaseQRankSum=4.907;DP=554;FS=32.476;HRun=0;HaplotypeScore=189.3660;InbreedingCoeff=0.4650;MQ=63.95;MQ0=11;MQRankSum=-1.881;QD=4.10;ReadPosRankSum=-0.101;VQSLOD=1.3927;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:35.30:0,35,936	0/0:9,0:10:9.03:0,9,265	./.	./.	0/0:27,0:26:27.08:0,27,789	0/0:18,0:17:24.05:0,24,449	0/1:20,1:19:98.23:98,0,341	0/0:14,0:14:9:0,9,91	0/0:16,0:16:17.15:0,17,246	0/0:21,0:21:21.54:0,22,834	0/0:18,0:18:18.05:0,18,565	0/0:23,0:22:18.02:0,18,276	0/0:16,0:16:14.97:0,15,164	0/0:19,0:19:18.06:0,18,352	0/0:18,0:23:2.62:0,3,377	0/0:15,0:15:12.04:0,12,293	0/0:19,0:21:3.99:0,4,557	0/0:19,0:20:30.99:0,31,829	0/0:17,0:16:3.39:0,3,10	1/1:15,3:18:3.48:118,3,0	0/1:21,0:21:0.01:0,0,0	0/0:26,0:25:21.06:0,21,480	0/0:16,0:18:9.03:0,9,150	0/0:18,0:19:21.07:0,21,419	0/0:20,0:20:21.03:0,21,910	1/1:17,3:20:8.75:190,9,0	0/1:12,6:17:1.61:112,0,2	0/0:11,0:11:15.04:0,15,567
chr10	97568215	.	GAA	G	5226.26	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.806;DP=715;FS=0.787;HRun=2;HaplotypeScore=104.0232;InbreedingCoeff=0.9992;MQ=87.85;MQ0=0;MQRankSum=-4.411;QD=43.55;ReadPosRankSum=2.434;VQSLOD=4.9526;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,166,3274	0/0:9,0:9:27.08:0,27,513	0/0:28,0:28:84.29:0,84,1625	0/0:23,0:23:66.22:0,66,1237	0/0:31,0:31:93.32:0,93,1881	0/0:22,0:22:66.23:0,66,1341	0/0:30,0:30:90.31:0,90,1818	0/0:36,0:36:99:0,108,2196	0/0:29,0:29:87.28:0,87,1732	0/0:29,0:29:84.29:0,84,1703	0/0:12,0:12:36.12:0,36,708	0/0:31,0:31:93.31:0,93,1854	0/0:33,0:33:99:0,99,1980	0/0:27,0:27:81.28:0,81,1646	0/0:30,0:30:90.31:0,90,1812	0/0:23,0:23:69.24:0,69,1403	0/0:40,0:40:99:0,117,2375	0/0:21,0:21:63.22:0,63,1280	1/1:2,15:17:48.15:758,48,0	1/1:0,29:29:75.26:1210,75,0	1/1:0,28:28:78.26:1246,78,0	0/0:16,0:16:48.16:0,48,976	0/0:15,0:15:45.15:0,45,914	0/0:27,0:27:81.23:0,81,1579	0/0:19,0:19:57.20:0,57,1141	1/1:1,29:30:26.29:1278,26,0	1/1:0,16:16:45.15:734,45,0	0/0:9,0:9:27.09:0,27,538
chr10	97570033	.	GA	G	1131.66	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.783;DP=542;FS=0.575;HRun=8;HaplotypeScore=51.2043;InbreedingCoeff=0.9775;MQ=72.90;MQ0=0;MQRankSum=-1.891;QD=22.63;ReadPosRankSum=1.467;VQSLOD=4.1090;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:16:36.06:348,36,0	0/0:14,0:14:39.12:0,39,471	0/0:15,0:15:29.97:0,30,311	0/0:3,0:3:9.01:0,9,95	0/0:20,0:20:57.17:0,57,689	0/0:34,0:34:96.28:0,96,1148	0/0:12,0:12:36.11:0,36,435	0/0:40,0:40:99:0,108,1265	0/0:22,1:23:34.19:0,34,673	0/0:18,0:18:54.15:0,54,634	0/0:22,0:22:63.18:0,63,746	0/0:18,0:18:48.15:0,48,580	0/0:18,0:18:51.14:0,51,605	0/0:22,0:22:63.18:0,63,749	0/0:20,0:20:54.15:0,54,642	1/1:0,16:16:48.08:464,48,0	0/0:20,0:20:60.08:0,60,703	1/1:1,17:18:48.08:463,48,0	0/0:17,0:17:30.09:0,30,362	0/0:27,0:27:72.22:0,72,870	0/0:20,0:20:60.18:0,60,724	0/0:14,0:14:42.12:0,42,495	0/0:20,0:20:57.17:0,57,687	0/0:17,0:17:48.15:0,48,580	0/0:13,0:13:39.12:0,39,466	0/0:27,0:27:78.24:0,78,942	0/0:31,0:31:78.23:0,78,931	0/0:7,0:7:21.06:0,21,254
chr10	97570936	.	AATTCAGAACAGGAGAC	A	488.87	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.799;DP=721;FS=0.000;HRun=0;HaplotypeScore=294.6223;InbreedingCoeff=0.9684;MQ=85.10;MQ0=0;MQRankSum=-2.112;QD=24.44;ReadPosRankSum=-0.333;VQSLOD=2.0108;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,15:20:12.04:575,12,0	0/0:14,0:14:36.12:0,36,2401	0/0:31,0:33:52.89:0,53,5253	0/0:30,0:28:78.27:0,78,4731	0/0:28,0:28:84.29:0,84,5576	0/0:40,0:40:99:0,117,8537	0/0:30,0:30:87.30:0,87,6427	0/0:30,0:30:87.30:0,87,5894	0/0:14,0:14:42.14:0,42,3056	0/0:27,0:27:81.28:0,81,5708	0/0:16,0:16:48.16:0,48,2582	0/0:28,0:28:84.29:0,84,5992	0/0:26,0:26:78.25:0,78,5537	0/0:23,0:23:69.24:0,69,4652	0/0:24,0:24:72.23:0,72,5110	0/0:29,0:29:84.29:0,84,6356	0/0:25,0:25:75.26:0,75,5251	0/0:23,0:23:69.24:0,69,4510	0/0:28,0:28:84.29:0,84,5570	0/0:27,0:27:78.27:0,78,5565	0/0:33,0:33:99:0,99,6943	0/0:15,0:15:45.15:0,45,2548	0/0:22,0:22:66.23:0,66,4282	0/0:28,0:28:84.27:0,84,5558	0/0:26,0:26:75.26:0,75,4971	0/0:31,0:31:93.32:0,93,6695	0/0:31,0:31:93.32:0,93,6338	0/0:20,0:20:57.16:0,57,3703
chr10	97571130	.	ATG	A	4353.19	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=9.451;DP=761;FS=16.969;HRun=0;HaplotypeScore=111.7240;InbreedingCoeff=0.8640;MQ=57.75;MQ0=6;MQRankSum=-1.875;QD=22.32;ReadPosRankSum=3.323;VQSLOD=4.6523;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:32:59.78:712,60,0	0/0:12,0:12:17.90:0,18,296	0/0:23,0:17:45.13:0,45,649	0/0:28,0:22:38.50:0,39,678	0/0:32,0:32:81.27:0,81,1349	0/0:33,0:33:62.20:0,62,990	0/0:30,0:30:66.68:0,67,1063	0/0:28,0:28:78.21:0,78,1157	0/0:24,0:24:57.14:0,57,926	0/0:44,0:44:99:0,123,1752	0/0:26,0:26:60.06:0,60,978	0/0:21,0:21:45.14:0,45,736	0/0:33,0:33:73.06:0,73,1151	0/0:23,0:23:48.15:0,48,774	0/0:30,0:30:66.23:0,66,1102	0/1:26,0:26:68.86:69,0,208	0/0:26,0:26:63.21:0,63,1019	0/0:13,2:13:2.90:0,3,16	1/1:6,21:26:42.16:636,42,0	1/1:6,18:24:45.15:584,45,0	1/1:3,22:23:54.18:700,54,0	0/0:29,0:29:57.19:0,57,955	0/0:30,0:30:63.20:0,63,1035	0/0:24,0:23:60.21:0,60,1003	0/0:36,0:36:78.27:0,78,1310	1/1:3,23:26:37.24:823,37,0	1/1:6,29:35:14.73:829,15,0	0/0:19,0:19:51.10:0,51,815
chr10	97571138	.	G	GTATGTA	1835.02	PASS	AB=0.904;AC=7;AF=0.125;AN=56;BaseQRankSum=2.704;DP=763;FS=2.946;HRun=0;HaplotypeScore=189.0132;InbreedingCoeff=0.0948;MQ=54.10;MQ0=7;MQRankSum=-5.382;QD=12.48;ReadPosRankSum=-1.771;VQSLOD=3.0007;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:99:222,0,431	0/0:12,0:12:17.56:0,18,409	0/0:29,0:20:60.19:0,60,1082	0/0:30,0:23:47.65:0,48,1002	0/0:34,0:34:60.58:0,61,1922	0/0:31,0:31:62.36:0,62,1464	0/0:31,0:31:79.45:0,79,1551	0/0:29,0:29:87.28:0,87,1774	0/0:22,0:22:57.14:0,57,1273	0/0:44,0:44:99:0,127,2512	0/0:27,0:27:59.84:0,60,1376	0/0:20,0:20:51.04:0,51,1105	0/0:31,0:31:76:0,76,1548	0/0:20,0:20:48.16:0,48,1089	0/0:30,0:30:66.02:0,66,1497	0/1:2,21:27:18.14:1414,0,18	0/0:24,0:24:63.22:0,63,1321	1/1:2,11:14:3.01:109,3,0	0/1:26,0:25:99:113,0,492	0/0:24,0:24:20.40:0,20,451	0/1:22,0:20:39.68:40,0,494	0/0:31,0:31:57.20:0,57,1319	0/0:33,0:33:65.71:0,66,1563	0/0:24,0:23:60.21:0,60,1366	0/0:35,0:35:78.27:0,78,1883	0/1:26,0:26:64.67:65,0,621	0/0:37,0:37:38.59:0,39,789	0/0:18,0:18:53.95:0,54,1178
chr10	97571842	.	CCA	C	208.69	PASS	AB=0.942;AC=17;AF=0.370;AN=46;BaseQRankSum=1.310;DP=422;FS=7.156;HRun=0;HaplotypeScore=66.9299;InbreedingCoeff=0.0492;MQ=73.99;MQ0=23;MQRankSum=1.388;QD=1.06;ReadPosRankSum=2.024;VQSLOD=0.2685;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:23:5.94:40,6,0	0/0:7,0:7:3:0,3,25	./.	./.	1/1:6,0:6:5.97:51,6,0	0/0:13,0:12:11.98:0,12,110	0/0:12,0:10:6.02:0,6,80	./.	0/0:9,0:9:8.96:0,9,100	0/1:17,1:18:15.96:16,0,143	0/1:7,2:8:17.94:26,0,18	0/1:16,0:17:5.11:5,0,78	0/0:13,0:12:6.02:0,6,81	0/0:8,0:8:3.01:0,3,40	0/1:12,0:12:16.93:17,0,161	0/0:14,0:14:12.03:0,12,154	0/1:17,2:18:19.95:20,0,118	1/1:5,3:7:1.71:29,2,0	./.	0/0:12,0:15:0.35:0,0,1	0/1:20,0:20:0:0,0,0	0/0:10,0:10:0.04:0,0,86	0/0:7,0:7:6.02:0,6,85	0/1:21,1:25:19.94:20,0,115	0/1:11,0:12:48.73:49,0,115	0/1:10,0:10:0:0,0,0	1/1:13,0:15:11.52:67,12,0	./.
chr10	97572419	.	AGATGCCATATT	A	1140.46	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.771;DP=601;FS=8.009;HRun=0;HaplotypeScore=190.0507;InbreedingCoeff=0.9958;MQ=91.58;MQ0=1;MQRankSum=-6.149;QD=40.73;ReadPosRankSum=0.264;VQSLOD=2.2367;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,20:28:39.05:1235,39,0	0/0:8,0:8:21.07:0,21,1159	0/0:20,0:20:51.11:0,51,2252	0/0:29,0:29:75.25:0,75,3281	0/0:25,0:25:75.26:0,75,4120	0/0:23,0:23:69.24:0,69,3814	0/0:16,0:16:42.14:0,42,2280	0/0:27,0:27:57.18:0,57,2406	0/0:20,0:19:54.19:0,54,3015	0/0:26,0:26:75.26:0,75,4231	0/0:28,0:28:84.29:0,84,4555	0/0:19,0:19:57.20:0,57,3185	0/0:19,0:19:54.19:0,54,2829	0/0:20,0:20:54.15:0,54,2649	0/0:18,0:18:54.17:0,54,2872	0/0:23,0:23:69.24:0,69,3882	0/0:18,0:18:54.19:0,54,3042	0/0:17,0:17:51.18:0,51,2845	0/0:25,0:25:75.24:0,75,3891	0/0:32,0:32:90.31:0,90,4921	0/0:14,0:14:42.14:0,42,2331	0/0:21,0:21:63.22:0,63,3517	0/0:20,0:20:60.20:0,60,3141	0/0:18,0:18:42.14:0,42,2382	0/0:22,0:22:66.23:0,66,3726	0/0:25,0:25:69.24:0,69,3872	0/0:23,0:23:66.23:0,66,3560	0/0:17,0:17:51.18:0,51,2893
chr10	97574295	.	T	TG	9431.22	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-16.927;DP=790;FS=2.484;HRun=0;HaplotypeScore=70.4922;InbreedingCoeff=0.9999;MQ=85.28;MQ0=0;MQRankSum=-6.137;QD=44.49;ReadPosRankSum=2.337;VQSLOD=5.4248;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,1720	0/0:13,0:13:39.12:0,39,530	0/0:26,0:26:72.21:0,72,968	0/0:22,0:23:51.13:0,51,751	0/0:29,0:29:87.29:0,87,1207	0/0:38,0:38:99:0,114,1578	0/0:25,0:25:75.24:0,75,1031	0/0:30,0:30:84.27:0,84,1159	0/0:30,0:30:90.29:0,90,1240	0/0:42,0:42:99:0,126,1735	0/0:23,0:23:69.22:0,69,947	0/0:22,0:22:66.21:0,66,905	0/0:29,0:29:87.29:0,87,1215	0/0:22,0:22:66.22:0,66,922	0/0:34,0:34:99:0,99,1384	1/1:0,26:26:75.26:1199,75,0	0/0:21,0:21:63.21:0,63,880	1/1:1,23:24:63.21:1007,63,0	1/1:0,25:25:75.19:1161,75,0	1/1:0,31:31:87.30:1368,87,0	1/1:0,46:46:99:2062,129,0	0/0:28,0:28:84.24:0,84,1122	0/0:30,0:30:87.28:0,87,1198	0/0:21,0:21:63.17:0,63,858	0/0:39,0:39:99:0,117,1605	1/1:0,26:26:78.27:1244,78,0	1/1:2,32:33:87.30:1391,87,0	0/0:10,0:10:30.10:0,30,419
chr10	97574496	.	CAA	C	3873.47	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.284;DP=694;FS=0.000;HRun=12;HaplotypeScore=115.6327;InbreedingCoeff=0.9733;MQ=75.33;MQ0=0;MQRankSum=-0.905;QD=22.92;ReadPosRankSum=4.141;VQSLOD=3.0720;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:34:78.06:0,78,744	0/0:10,0:11:33.10:0,33,473	0/0:15,0:16:13.48:0,13,300	0/0:19,0:19:22.52:0,23,235	0/0:21,0:21:57.16:0,57,792	0/0:28,0:28:75.24:0,75,1097	0/0:33,0:34:78.19:0,78,1096	0/0:38,0:39:95.81:0,96,1388	0/0:32,0:32:87.25:0,87,1231	0/0:35,0:37:95.79:0,96,1343	0/0:14,0:15:41.61:0,42,568	0/0:22,0:22:54.15:0,54,742	0/0:18,0:18:45.14:0,45,648	0/0:27,0:27:72.23:0,72,1052	0/0:23,0:26:68.20:0,68,938	1/1:4,22:26:50.98:518,51,0	0/0:32,0:32:87.27:0,87,1246	1/1:3,18:22:15.19:516,15,0	1/1:4,15:19:45.08:457,45,0	1/1:4,21:26:53.75:530,54,0	1/1:2,15:19:29.54:410,30,0	0/0:28,0:29:77.69:0,78,1067	0/0:31,0:33:74.21:0,74,1015	0/0:21,0:23:55.65:0,56,739	0/0:21,0:23:65.18:0,65,886	1/1:1,22:23:24.47:627,24,0	1/1:5,28:34:74.88:815,75,0	0/0:6,0:6:6.02:0,6,90
chr10	97575652	.	G	GAAA	3171.15	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=2.639;DP=435;FS=0.466;HRun=10;HaplotypeScore=76.8028;InbreedingCoeff=0.7627;MQ=78.29;MQ0=1;MQRankSum=-0.283;QD=19.22;ReadPosRankSum=-2.235;VQSLOD=1.3011;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:23:38.33:277,38,0	0/0:9,0:9:21.03:0,21,252	0/0:18,0:16:13.26:0,13,196	0/0:15,0:12:14.90:0,15,135	0/0:20,0:20:11.70:0,12,377	0/0:18,0:18:7.30:0,7,339	0/0:14,0:14:39.09:0,39,458	0/0:28,0:30:52.31:0,52,609	0/0:8,0:8:18.03:0,18,219	0/1:20,0:20:15.29:15,0,361	0/0:10,0:10:2.03:0,2,233	0/0:12,0:12:20.96:0,21,255	0/0:11,0:11:27.05:0,27,328	0/0:8,0:8:18.01:0,18,205	0/0:9,0:9:18.02:0,18,219	1/1:5,0:10:14.91:110,15,0	0/0:34,0:37:93.06:0,93,1094	1/1:6,0:22:32.85:248,33,0	1/1:5,10:16:33.07:531,33,0	1/1:6,12:20:42.49:612,42,0	1/1:3,6:8:2.16:56,2,0	0/0:13,0:14:17.90:0,18,203	0/0:8,0:8:5.91:0,6,73	0/0:13,0:13:26.95:0,27,301	0/0:7,0:7:5.02:0,5,71	1/1:6,12:18:5.63:570,6,0	1/1:4,20:26:57.03:945,57,0	0/0:7,0:7:11.97:0,12,133
chr10	97576058	.	C	CG	6800.28	PASS	AB=0.875;AC=15;AF=0.268;AN=56;BaseQRankSum=11.275;DP=576;FS=1.140;HRun=0;HaplotypeScore=68.9440;InbreedingCoeff=0.9087;MQ=86.21;MQ0=0;MQRankSum=-2.112;QD=42.24;ReadPosRankSum=0.071;VQSLOD=5.3021;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,159,2184	0/0:8,0:8:24.08:0,24,329	0/0:15,0:15:39.06:0,39,465	0/0:24,0:25:62.44:0,62,874	0/0:27,0:27:78.26:0,78,1089	0/0:28,0:28:84.24:0,84,1137	0/0:20,0:20:60.20:0,60,839	0/0:28,0:28:84.26:0,84,1144	0/1:6,1:7:26.77:27,0,231	0/0:19,0:19:57.18:0,57,783	0/0:18,0:18:45.14:0,45,611	0/0:14,0:14:39.13:0,39,545	0/0:19,0:19:57.16:0,57,776	0/0:15,0:15:45.15:0,45,629	0/0:13,0:13:36.12:0,36,498	1/1:1,17:18:42.14:670,42,0	0/0:34,0:34:99:0,102,1408	1/1:0,28:28:81.28:1292,81,0	1/1:0,21:21:63.21:1005,63,0	1/1:0,18:18:48.16:765,48,0	1/1:0,27:27:69.24:1101,69,0	0/0:20,0:20:54.18:0,54,755	0/0:12,0:12:36.12:0,36,499	0/0:21,0:21:63.21:0,63,880	0/0:11,0:11:33.11:0,33,451	1/1:0,23:23:69.24:1094,69,0	1/1:0,19:19:54.18:847,54,0	0/0:14,0:14:42.14:0,42,587
chr10	97577530	.	CG	C	1345.99	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.396;DP=611;FS=6.277;HRun=2;HaplotypeScore=59.3301;InbreedingCoeff=0.9831;MQ=86.62;MQ0=0;MQRankSum=-5.281;QD=32.83;ReadPosRankSum=2.513;VQSLOD=3.4825;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,39:41:99:1441,111,0	0/0:10,0:10:30.10:0,30,449	0/0:21,0:21:57.13:0,57,807	0/0:22,0:22:63.17:0,63,866	0/0:13,0:13:36.12:0,36,537	0/0:22,0:22:63.21:0,63,944	0/0:29,0:29:84.28:0,84,1257	0/0:20,0:20:60.18:0,60,843	0/0:33,0:33:96.31:0,96,1414	0/0:25,0:25:69.23:0,69,1014	0/0:10,0:10:30.10:0,30,450	0/0:24,0:24:72.24:0,72,1078	0/0:18,0:18:54.18:0,54,808	0/0:27,0:27:81.25:0,81,1182	0/0:18,0:18:51.17:0,51,764	0/0:20,0:20:60.20:0,60,886	0/0:35,0:35:99:0,99,1437	0/0:30,0:30:84.28:0,84,1258	0/0:17,0:17:51.17:0,51,762	0/0:18,0:18:54.17:0,54,787	0/0:31,0:31:87.29:0,87,1301	0/0:15,0:15:45.15:0,45,673	0/0:22,0:22:63.20:0,63,912	0/0:19,0:19:57.19:0,57,854	0/0:22,0:22:66.22:0,66,989	0/0:31,0:31:93.30:0,93,1371	0/0:13,0:13:33.11:0,33,494	0/0:5,0:5:15.05:0,15,225
chr10	97577801	.	C	CCA	116.86	PASS	AB=0.733;AC=1;AF=0.018;AN=56;BaseQRankSum=2.867;DP=696;FS=8.822;HRun=0;HaplotypeScore=83.4780;InbreedingCoeff=-0.0182;MQ=82.37;MQ0=0;MQRankSum=-3.393;QD=10.62;ReadPosRankSum=0.470;VQSLOD=2.3217;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,172,2497	0/0:16,0:16:48.16:0,48,706	0/0:13,0:13:33.09:0,33,460	0/0:24,0:24:63.11:0,63,863	0/0:13,0:13:36.12:0,36,530	0/0:17,0:17:51.17:0,51,751	0/0:26,0:26:75.24:0,75,1082	0/0:40,0:40:99:0,111,1616	0/0:20,0:20:60.19:0,60,864	0/0:29,0:29:81.27:0,81,1176	0/0:18,0:18:51.17:0,51,751	0/0:31,0:31:93.29:0,93,1330	0/0:28,0:28:81.27:0,81,1185	0/0:33,0:33:99:0,99,1458	0/0:19,0:19:57.18:0,57,819	0/0:25,0:25:75.24:0,75,1084	0/0:32,0:32:93.31:0,93,1370	0/0:23,0:23:63.21:0,63,928	0/0:20,0:20:57.16:0,57,769	0/0:21,0:21:63.21:0,63,927	0/0:27,0:27:78.26:0,78,1148	0/0:21,0:21:54.17:0,54,775	0/0:23,0:23:69.20:0,69,973	0/0:37,0:37:99:0,111,1554	0/0:24,0:24:69.23:0,69,1016	0/0:23,0:23:69.22:0,69,981	0/0:24,0:23:66.22:0,66,972	0/1:7,4:11:99:191,0,276
chr10	97579279	.	GTCTC	G	1402.57	PASS	AB=0.984;AC=28;AF=0.519;AN=54;BaseQRankSum=2.372;DP=781;FS=13.772;HRun=0;HaplotypeScore=155.6168;InbreedingCoeff=-0.4643;MQ=63.87;MQ0=21;MQRankSum=0.786;QD=2.24;ReadPosRankSum=0.595;VQSLOD=2.1677;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:9.02:103,9,0	0/0:10,0:10:3.48:0,3,33	./.	0/0:57,0:23:0.94:0,1,1	0/1:27,0:27:93.30:93,0,225	0/1:30,0:30:99:109,0,153	0/1:31,0:29:64.90:65,0,178	1/1:50,0:48:6.90:33,7,0	0/1:23,0:23:12.76:13,0,387	0/0:22,0:21:18.04:0,18,305	0/1:24,0:24:99:144,0,231	0/1:27,0:29:99:106,0,282	0/1:25,0:24:61.27:61,0,140	0/1:29,0:29:44.34:44,0,533	0/1:31,0:31:13.14:13,0,401	0/1:36,0:36:99:159,0,198	0/1:22,0:20:20.14:20,0,212	0/1:13,0:14:32.58:33,0,42	0/1:25,1:26:39.46:51,0,39	1/1:20,5:25:0.03:0,0,0	1/1:33,0:32:3.31:43,3,0	0/1:29,0:29:13.33:13,0,407	0/0:29,0:29:12.93:0,13,203	0/1:23,0:22:99:170,0,174	0/1:20,1:20:85.42:85,0,117	0/1:25,0:22:14.33:70,0,14	0/1:35,0:35:85.80:86,0,250	1/1:10,0:8:3.01:38,3,0
chr10	97579525	.	GACACACACACACACACAC	G	3984.91	PASS	AB=0.864;AC=13;AF=0.232;AN=56;BaseQRankSum=9.916;DP=786;FS=19.047;HRun=0;HaplotypeScore=361.6166;InbreedingCoeff=0.4962;MQ=55.92;MQ0=21;MQRankSum=-8.782;QD=14.33;ReadPosRankSum=-2.903;VQSLOD=0.5750;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:44:99:348,0,230	0/0:12,0:12:24.07:0,24,1151	0/0:39,0:11:11.71:0,12,200	0/1:58,0:19:6.62:7,0,31	0/0:20,0:20:39.09:0,39,1956	0/0:17,0:19:33.11:0,33,2166	0/0:26,0:26:57.18:0,57,2764	0/0:42,0:38:69.23:0,69,2808	0/0:25,0:28:63.20:0,63,3843	0/0:26,0:28:63.22:0,63,3472	0/0:18,0:19:42.14:0,42,2179	0/0:26,0:25:57.20:0,57,3547	0/0:21,0:21:42.08:0,42,2301	0/0:26,0:29:62.70:0,63,3064	0/0:25,0:26:41.91:0,42,2897	1/1:16,6:22:33.11:982,33,0	0/0:23,0:25:62.01:0,62,3205	0/1:23,0:21:27.38:27,0,349	1/1:10,3:11:18.06:654,18,0	0/1:21,9:30:53.49:276,0,53	1/1:38,2:37:11.12:127,11,0	0/0:24,0:24:57.20:0,57,3102	0/0:25,0:25:51.13:0,51,2399	0/0:52,0:53:99:0,114,7075	0/0:25,0:26:42.11:0,42,2176	1/1:23,4:27:33.09:1048,33,0	0/1:15,4:19:30.63:516,0,31	0/0:10,0:13:30.07:0,30,1876
chr10	97579569	.	C	CA	4889.87	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=2.096;DP=805;FS=2.666;HRun=0;HaplotypeScore=160.6113;InbreedingCoeff=0.9970;MQ=55.81;MQ0=13;MQRankSum=-4.917;QD=19.96;ReadPosRankSum=1.974;VQSLOD=6.0555;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,40:41:41.04:604,41,0	0/0:5,0:5:15.03:0,15,187	0/0:37,0:17:45.39:0,45,542	0/0:56,0:34:57.01:0,57,766	0/0:26,0:26:53.41:0,53,646	0/0:27,0:27:68.27:0,68,830	0/0:24,0:24:60.18:0,60,793	0/0:48,0:46:99:0,132,1702	0/0:23,0:23:63.18:0,63,825	0/0:28,0:27:78.06:0,78,912	0/0:25,0:25:65.90:0,66,819	0/0:19,0:19:51.15:0,51,658	0/0:28,0:28:80.82:0,81,937	0/0:35,0:33:81.17:0,81,1009	0/0:31,0:30:84.64:0,85,1060	1/1:1,36:36:43.34:597,43,0	0/0:17,0:17:51.12:0,51,686	1/1:0,24:23:54.18:773,54,0	1/1:4,17:18:48.12:635,48,0	1/1:0,28:28:29.19:361,29,0	1/1:5,45:46:47.42:646,47,0	0/0:28,0:28:80.81:0,81,1045	0/0:20,0:19:50.51:0,51,618	0/0:54,1:54:99:0,144,1867	0/0:19,0:18:45.12:0,45,582	1/1:2,20:22:40.56:731,41,0	1/1:0,22:22:38.99:542,39,0	0/0:9,0:9:27.04:0,27,330
chr10	97579656	.	TACAG	T	719.67	PASS	AB=0.625;AC=1;AF=0.018;AN=56;BaseQRankSum=5.807;DP=958;FS=0.000;HRun=0;HaplotypeScore=191.6860;InbreedingCoeff=0.4591;MQ=57.42;MQ0=0;MQRankSum=1.652;QD=28.79;ReadPosRankSum=0.561;VQSLOD=3.1027;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:90.31:0,90,2290	0/0:10,0:10:30.10:0,30,771	0/0:50,0:29:75.26:0,75,1799	0/0:35,0:29:77.29:0,77,1839	0/0:37,0:37:93.29:0,93,2235	0/0:28,0:28:66.23:0,66,1670	0/0:29,0:28:72.23:0,72,1758	0/0:57,0:57:99:0,147,3569	0/0:31,0:31:93.29:0,93,2293	0/0:45,0:45:99:0,123,2910	0/0:27,0:27:69.23:0,69,1745	0/0:38,0:38:99:0,99,2487	0/0:40,0:39:99:0,102,2483	0/0:34,0:34:99:0,102,2412	0/0:32,0:32:93.26:0,93,2182	0/0:45,0:44:93.32:0,93,2359	0/0:25,0:25:72.25:0,72,1837	0/1:10,15:24:3.49:794,0,3	0/0:35,0:35:81.21:0,81,1756	0/0:20,0:20:45.15:0,45,1106	0/0:65,0:65:99:0,138,3518	0/0:32,0:32:81.28:0,81,1972	0/0:30,0:30:74.81:0,75,1742	0/0:42,0:42:99:0,114,2768	0/0:19,0:19:54.17:0,54,1332	0/0:41,0:41:99:0,117,2832	0/0:32,0:31:81.28:0,81,2028	0/0:12,0:12:33.07:0,33,757
chr10	97579753	.	G	GACAA	13454.49	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-8.697;DP=979;FS=0.291;HRun=0;HaplotypeScore=159.1492;InbreedingCoeff=0.9563;MQ=58.72;MQ0=12;MQRankSum=-2.559;QD=47.37;ReadPosRankSum=2.181;VQSLOD=5.2538;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,23:29:60.13:1480,60,0	0/0:19,0:19:57.15:0,57,975	0/0:46,0:24:51.98:0,52,710	0/0:40,0:26:26.89:0,27,662	0/0:35,0:35:93.13:0,93,1660	0/0:26,0:26:72.08:0,72,1154	0/0:30,0:30:75.15:0,75,1185	0/0:60,0:60:99:0,174,2413	0/0:36,0:36:96.17:0,96,1639	0/0:44,0:44:99:0,117,1913	0/0:25,0:25:75.13:0,75,1263	0/0:36,0:36:99:0,108,1865	0/0:42,0:41:99:0,101,1561	0/0:30,0:30:87.15:0,87,1401	0/0:34,0:34:90.51:0,91,1577	1/1:4,29:35:0.27:1214,0,0	0/0:24,0:24:57.06:0,57,1139	1/1:17,15:31:42.25:1428,42,0	1/1:3,25:26:78.03:1209,78,0	1/1:2,23:25:63.02:1396,63,0	1/1:4,62:67:99:3417,129,0	0/0:44,0:44:99:0,123,2055	0/0:22,0:22:60.12:0,60,964	0/0:49,0:48:99:0,122,2143	0/0:32,0:32:90.24:0,90,1544	1/1:3,26:29:24.47:1822,24,0	1/1:2,34:36:63.10:1488,63,0	0/0:21,0:21:63.11:0,63,994
chr10	97579930	.	T	TCTCTCTCC	825.80	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.215;DP=772;FS=0.000;HRun=0;HaplotypeScore=184.2530;InbreedingCoeff=0.8300;MQ=63.80;MQ0=21;MQRankSum=-4.193;QD=39.32;ReadPosRankSum=-0.429;VQSLOD=2.7958;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:75.25:0,75,1745	0/0:15,0:15:29.10:0,29,554	0/0:75,0:22:25.90:0,26,489	0/0:100,0:33:2.14:0,2,544	0/0:21,0:21:42.13:0,42,989	0/0:17,0:17:42.11:0,42,886	0/0:24,0:24:57.13:0,57,1135	0/0:24,0:23:48.14:0,48,977	0/0:19,0:19:39.13:0,39,965	0/0:31,0:31:75.21:0,75,1736	0/0:16,0:16:36.12:0,36,901	0/0:35,0:35:71.86:0,72,1493	0/0:26,0:25:60.15:0,60,1210	0/0:17,0:17:42.14:0,42,1081	0/0:27,0:27:69.21:0,69,1575	1/1:2,19:21:27.04:920,27,0	0/0:22,0:22:50.93:0,51,1126	0/0:15,0:15:39.07:0,39,791	0/0:15,0:15:27.09:0,27,629	0/0:21,0:20:45.09:0,45,947	0/0:35,0:35:74.16:0,74,1632	0/0:22,0:22:45.15:0,45,1069	0/0:23,0:23:50.85:0,51,1160	0/0:32,0:31:72.19:0,72,1620	0/0:16,0:16:33.10:0,33,681	0/0:23,0:23:48.07:0,48,1030	0/0:28,0:27:71.81:0,72,1613	0/0:19,0:19:48.10:0,48,1016
chr10	97581574	.	GA	G	2769.73	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.919;DP=590;FS=3.988;HRun=10;HaplotypeScore=58.6518;InbreedingCoeff=0.9974;MQ=73.01;MQ0=0;MQRankSum=-0.875;QD=21.31;ReadPosRankSum=2.109;VQSLOD=4.7942;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.20:0,81,887	0/0:11,0:11:21.05:0,21,228	0/0:12,0:12:20.22:0,20,189	0/0:15,0:14:25.52:0,26,235	0/0:32,2:35:40.94:0,41,867	0/0:20,0:22:36.94:0,37,610	0/0:21,0:21:60.14:0,60,654	0/0:28,0:28:57.15:0,57,630	0/0:23,0:23:54.14:0,54,595	0/0:23,0:23:66.17:0,66,723	0/0:28,0:28:66.17:0,66,723	0/0:33,0:33:87.24:0,87,962	0/0:19,1:20:34.15:0,34,604	0/0:22,0:23:66.01:0,66,711	0/0:27,0:27:66.18:0,66,730	1/1:1,14:15:41.99:365,42,0	0/0:26,0:26:66.15:0,66,713	1/1:2,9:11:26.99:234,27,0	1/1:2,12:14:33.46:287,33,0	1/1:3,25:28:68.97:599,69,0	1/1:0,10:10:29.99:260,30,0	0/0:17,0:17:36.06:0,36,384	0/0:14,0:14:39.10:0,39,424	0/0:16,0:16:45.11:0,45,491	0/0:22,1:23:31.10:0,31,571	1/1:2,19:21:56.99:495,57,0	1/1:2,29:31:83.98:729,84,0	0/0:12,0:12:27.06:0,27,291
chr10	97582769	.	TTGTG	T	1380.15	PASS	AB=0.838;AC=22;AF=0.423;AN=52;BaseQRankSum=5.972;DP=629;FS=38.260;HRun=0;HaplotypeScore=107.3831;InbreedingCoeff=0.6900;MQ=62.40;MQ0=9;MQRankSum=-2.975;QD=5.19;ReadPosRankSum=-0.836;VQSLOD=0.2664;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:34:9.01:82,9,0	0/0:9,0:9:3.54:0,4,321	./.	./.	0/0:22,0:23:11.78:0,12,224	1/1:13,4:17:6.02:93,6,0	0/1:13,4:17:40.48:40,0,42	0/0:29,0:27:2.97:0,3,20	1/1:23,3:27:11.99:141,12,0	0/0:16,0:16:12.04:0,12,275	0/0:16,0:16:15.04:0,15,273	1/1:8,4:14:15.04:195,15,0	1/1:23,1:27:8.65:120,9,0	1/1:14,1:15:3.01:46,3,0	1/1:18,7:26:15.04:214,15,0	1/1:17,0:22:18.02:167,18,0	0/0:25,0:32:42.03:0,42,604	0/0:31,0:42:11.48:0,11,129	0/0:23,0:23:6.02:0,6,113	0/0:20,0:21:12.04:0,12,245	0/0:27,0:26:21.07:0,21,410	1/1:16,3:18:6.02:93,6,0	0/1:11,0:13:0:0,0,0	1/1:21,13:34:24.64:374,25,0	0/0:17,0:19:27.27:0,27,417	0/0:15,0:16:15.01:0,15,239	0/0:29,0:28:45.10:0,45,741	0/0:6,0:6:2.38:0,2,16
chr10	97584788	.	A	AT	206.70	PASS	AB=0.829;AC=3;AF=0.054;AN=56;BaseQRankSum=-2.003;DP=600;FS=12.794;HRun=11;HaplotypeScore=61.7284;InbreedingCoeff=0.0651;MQ=69.21;MQ0=0;MQRankSum=-1.378;QD=5.04;ReadPosRankSum=-2.311;VQSLOD=-0.0122;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:71.65:0,72,557	0/0:9,0:9:20.89:0,21,159	0/0:5,0:5:8.92:0,9,64	0/1:11,0:10:8.44:8,0,55	0/0:23,0:23:53.90:0,54,403	0/0:27,0:27:71.70:0,72,557	0/1:11,1:12:0.57:1,0,179	0/0:24,0:25:52.82:0,53,399	0/0:15,0:15:32.87:0,33,255	0/0:18,0:18:44.82:0,45,347	0/0:30,1:32:37.23:0,37,461	0/0:32,0:33:73.68:0,74,563	0/0:25,1:28:20.69:0,21,328	0/0:22,0:23:43.79:0,44,331	0/0:35,0:36:58.40:0,58,626	0/0:25,1:27:19.29:0,19,319	0/0:16,0:18:49.85:0,50,377	0/1:4,13:18:7.56:280,0,8	0/0:20,0:20:32.73:0,33,249	0/0:27,0:27:56.74:0,57,441	0/0:18,0:18:38.83:0,39,302	0/0:24,0:24:47.77:0,48,371	0/0:24,1:25:29.28:0,29,411	0/0:20,0:20:35.80:0,36,279	0/0:18,0:18:50.78:0,51,392	0/0:24,0:24:53.76:0,54,418	0/0:22,0:22:37.84:0,38,284	0/0:8,0:8:23.91:0,24,186
chr10	97585864	.	TTA	T	1773.06	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=8.756;DP=250;FS=4.592;HRun=0;HaplotypeScore=31.9879;InbreedingCoeff=0.8141;MQ=78.18;MQ0=1;MQRankSum=1.925;QD=32.83;ReadPosRankSum=0.272;VQSLOD=5.0824;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:4:12.04:160,12,0	0/0:5,0:5:15.05:0,15,260	0/0:14,1:7:5.61:0,6,51	0/0:34,0:13:7.91:0,8,99	0/0:8,0:8:24.08:0,24,409	0/0:4,0:4:9.03:0,9,150	0/0:3,0:3:9.03:0,9,156	0/0:40,0:40:87.30:0,87,1476	./.	0/0:8,0:8:24.08:0,24,416	0/0:9,0:9:27.09:0,27,461	0/0:3,0:3:9.03:0,9,156	0/0:3,0:3:9.03:0,9,156	0/0:4,0:4:12.04:0,12,208	0/0:3,0:3:9.03:0,9,156	1/1:1,2:3:3.01:40,3,0	0/0:14,0:14:42.11:0,42,696	1/1:0,12:12:30.10:397,30,0	1/1:0,12:12:36.09:460,36,0	1/1:0,9:9:27.09:360,27,0	1/1:0,1:1:3.01:40,3,0	0/0:3,0:3:9.03:0,9,149	0/0:3,0:3:9.03:0,9,156	0/0:3,0:3:9.03:0,9,156	0/0:9,0:9:27.09:0,27,464	1/1:0,9:9:27.07:343,27,0	1/1:0,4:4:12.04:160,12,0	0/0:25,0:25:69.24:0,69,1192
chr10	97589578	.	A	AAC	1952.12	PASS	AB=0.894;AC=32;AF=0.640;AN=50;BaseQRankSum=0.936;DP=544;FS=12.666;HRun=0;HaplotypeScore=113.4837;InbreedingCoeff=0.2111;MQ=63.43;MQ0=10;MQRankSum=0.787;QD=5.04;ReadPosRankSum=-2.271;VQSLOD=1.8615;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:6:64,6,0	0/0:6,0:7:2.84:0,3,14	./.	./.	0/1:19,4:23:19.81:120,0,20	0/1:14,6:22:5.63:133,0,6	0/0:19,0:19:6.01:0,6,64	1/1:20,0:20:3.84:21,4,0	0/1:18,0:17:64.37:142,0,64	0/0:19,0:19:3.47:0,3,27	0/0:14,0:14:2.99:0,3,32	1/1:15,3:18:5.51:53,6,0	1/1:13,0:13:6.01:69,6,0	0/0:15,0:15:8.94:0,9,95	0/1:15,5:21:25.87:38,0,26	1/1:20,0:19:23.95:201,24,0	1/1:13,10:23:20.03:306,20,0	0/1:12,0:11:27.27:27,0,28	1/1:23,0:23:4.56:32,5,0	1/1:24,0:23:11.96:101,12,0	1/1:18,0:17:2.87:15,3,0	1/1:17,6:24:9.50:133,10,0	0/1:14,0:13:15.96:16,0,26	1/1:11,11:23:24.08:352,24,0	0/0:24,0:23:3.74:0,4,196	1/1:13,0:13:11.98:102,12,0	1/1:32,0:31:22.98:183,23,0	./.
chr10	97589583	.	A	ACACC	2004.72	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=7.357;DP=581;FS=9.268;HRun=0;HaplotypeScore=133.3515;InbreedingCoeff=0.5604;MQ=56.88;MQ0=13;MQRankSum=-4.172;QD=11.14;ReadPosRankSum=1.267;VQSLOD=2.3864;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:25:16.27:16,0,148	0/0:8,0:8:17.99:0,18,160	0/0:27,0:18:48.03:0,48,487	0/0:25,0:14:36.09:0,36,397	0/0:25,0:25:50.09:0,50,413	0/0:27,0:27:10.42:0,10,373	0/0:21,0:21:53.97:0,54,514	0/0:20,0:19:44.71:0,45,350	0/0:19,0:18:30.13:0,30,316	0/0:23,0:22:62.64:0,63,583	0/0:15,0:15:38.97:0,39,356	0/0:18,0:18:33.84:0,34,275	0/0:13,0:12:21.80:0,22,167	0/0:17,0:17:41.97:0,42,439	0/0:22,0:22:39.59:0,40,357	1/1:6,15:21:20.38:528,20,0	0/0:26,0:26:34.43:0,34,273	0/1:13,0:12:16.24:18,0,16	0/1:26,0:26:18.44:197,0,18	1/1:23,0:22:21.35:345,21,0	1/1:23,0:22:27.60:242,28,0	0/0:23,0:23:36.62:0,37,296	0/0:19,0:18:28.20:0,28,253	0/0:25,0:24:25.06:0,25,159	0/0:27,0:26:61.58:0,62,719	0/1:14,0:14:9.12:250,0,9	1/1:33,0:32:68.77:582,69,0	0/0:1,0:1:2.99:0,3,24
chr10	97589585	.	A	ACC	1645.89	PASS	AB=0.955;AC=15;AF=0.268;AN=56;BaseQRankSum=11.727;DP=580;FS=1.459;HRun=1;HaplotypeScore=93.6111;InbreedingCoeff=0.1353;MQ=55.99;MQ0=15;MQRankSum=-0.142;QD=6.14;ReadPosRankSum=5.064;VQSLOD=0.0600;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:8.41:0,8,157	0/0:8,0:8:20.94:0,21,167	0/0:26,0:17:48.03:0,48,487	0/0:24,0:13:36.09:0,36,397	0/1:23,0:23:1.32:1,0,343	0/0:26,0:26:8.87:0,9,354	0/0:22,0:22:59.96:0,60,541	0/0:21,0:20:53.61:0,54,421	0/1:19,0:18:17.64:18,0,268	0/0:22,0:21:62.62:0,63,570	0/0:15,0:15:41.87:0,42,361	0/0:18,0:18:16.90:0,17,255	0/0:15,0:14:4.87:0,5,146	0/0:17,0:17:41.87:0,42,402	0/0:23,0:23:25.74:0,26,346	1/1:17,3:19:27.04:358,27,0	0/1:26,0:26:78.36:78,0,256	0/1:4,9:12:22.27:47,0,22	0/1:25,0:25:99:178,0,128	1/1:22,0:21:4.86:214,5,0	1/1:24,0:23:29.93:246,30,0	0/1:23,0:23:12.25:12,0,249	0/0:20,0:19:28.20:0,28,242	0/1:25,0:24:99:111,0,105	0/0:27,0:26:64.58:0,65,672	0/1:15,0:15:15.31:188,0,15	0/1:33,0:32:19.60:359,0,20	0/0:1,0:1:2.99:0,3,24
chr10	97591544	.	C	CTCCTCT	2824.05	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=10.635;DP=626;FS=0.971;HRun=0;HaplotypeScore=135.4740;InbreedingCoeff=0.8453;MQ=47.77;MQ0=27;MQRankSum=-6.239;QD=22.59;ReadPosRankSum=-0.191;VQSLOD=3.4960;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,2:20:29.62:456,30,0	0/0:6,0:6:11.67:0,12,170	0/0:24,0:3:6:0,6,58	./.	0/0:22,0:22:53.90:0,54,781	0/0:23,0:22:41.13:0,41,1005	0/0:40,0:40:99:0,109,1921	0/0:23,0:20:46.11:0,46,584	0/0:30,0:30:87.15:0,87,1529	0/0:37,0:35:96.24:0,96,1750	0/0:20,0:17:45.08:0,45,800	0/0:27,0:27:78.15:0,78,1348	0/0:25,0:24:66.08:0,66,1098	0/0:28,0:27:52.96:0,53,1154	0/0:30,0:29:75.18:0,75,1418	0/1:17,0:17:63.35:63,0,162	0/0:30,0:27:65.93:0,66,903	1/1:18,0:18:2.15:168,2,0	1/1:10,0:8:17.88:210,18,0	1/1:11,1:11:26.88:503,27,0	1/1:15,1:15:29.78:364,30,0	0/0:20,0:19:51.09:0,51,941	0/0:18,0:18:50.90:0,51,826	0/0:35,0:34:93.18:0,93,1759	0/0:25,0:25:69.15:0,69,1255	1/1:16,3:19:45.04:755,45,0	1/1:10,2:12:26.82:494,27,0	0/0:14,0:14:39.04:0,39,669
chr10	97591550	.	C	CT	128.66	PASS	AB=0.667;AC=1;AF=0.019;AN=54;BaseQRankSum=4.986;DP=632;FS=4.692;HRun=1;HaplotypeScore=96.5999;InbreedingCoeff=-0.0218;MQ=47.80;MQ0=26;MQRankSum=-3.412;QD=7.15;ReadPosRankSum=2.501;VQSLOD=1.0941;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:29.25:0,29,254	0/0:5,0:5:12.02:0,12,143	0/0:32,0:5:10.85:0,11,121	./.	0/0:24,0:24:57.18:0,57,736	0/0:21,0:20:57.19:0,57,739	0/0:41,0:41:99:0,120,1495	0/0:25,0:22:50.98:0,51,575	0/0:29,0:29:81.24:0,81,1033	0/0:35,0:33:96.31:0,96,1245	0/0:18,0:15:42.12:0,42,530	0/0:27,0:27:76.66:0,77,995	0/0:23,0:22:66.20:0,66,840	0/0:28,0:27:49.55:0,50,756	0/0:26,0:25:75.24:0,75,972	0/0:17,0:17:34.96:0,35,227	0/0:29,0:26:64.39:0,64,783	0/1:9,9:18:48.99:203,0,49	0/0:10,0:8:24.06:0,24,292	0/0:11,0:10:26.85:0,27,253	0/0:16,0:15:20.12:0,20,137	0/0:22,0:21:54.13:0,54,677	0/0:20,0:20:54.18:0,54,697	0/0:34,0:33:96.28:0,96,1217	0/0:25,0:25:69.22:0,69,894	0/0:17,0:17:40.59:0,41,292	0/0:11,0:11:26.16:0,26,200	0/0:14,0:14:42.08:0,42,497
chr10	97591583	.	CTCTTCCTCT	C	4300.52	PASS	AB=0.850;AC=14;AF=0.250;AN=56;BaseQRankSum=10.685;DP=650;FS=45.402;HRun=0;HaplotypeScore=159.9500;InbreedingCoeff=0.7979;MQ=45.76;MQ0=22;MQRankSum=-8.489;QD=37.72;ReadPosRankSum=-0.164;VQSLOD=2.3662;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:21:21.07:609,21,0	0/0:5,0:4:9.50:0,10,384	0/0:61,0:12:24.08:0,24,579	0/0:66,0:13:39.13:0,39,1218	0/0:26,0:26:69.22:0,69,2437	0/0:21,0:21:48.10:0,48,1924	0/0:32,0:32:75.23:0,75,2573	0/0:22,0:22:42.12:0,42,1265	0/0:20,0:20:51.18:0,51,2056	0/0:28,0:28:66.22:0,66,2321	0/0:13,0:13:36.08:0,36,1224	0/0:27,0:27:77.28:0,77,2729	0/0:22,0:22:57.15:0,57,2202	0/0:26,0:26:75.25:0,75,2695	0/0:28,0:28:69.22:0,69,2175	1/1:3,18:21:32.93:957,33,0	0/0:25,0:24:57.20:0,57,2030	0/1:12,9:20:99:493,0,112	1/1:5,6:8:21.07:528,21,0	1/1:3,5:8:18.06:398,18,0	0/1:10,0:10:11.35:166,0,11	0/0:21,0:21:54.19:0,54,1879	0/0:17,0:17:36.12:0,36,1446	0/0:39,0:39:99:0,103,4052	0/0:23,0:23:54.15:0,54,1929	1/1:2,11:13:33.11:909,33,0	1/1:4,5:9:11.99:241,12,0	0/0:14,0:14:27.09:0,27,1200
chr10	97591589	.	CTCT	C	1528.58	PASS	AB=0.947;AC=15;AF=0.268;AN=56;BaseQRankSum=11.958;DP=623;FS=44.850;HRun=0;HaplotypeScore=101.1783;InbreedingCoeff=0.8702;MQ=45.71;MQ0=18;MQRankSum=-8.644;QD=14.29;ReadPosRankSum=-0.391;VQSLOD=1.3350;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:20.99:191,21,0	0/0:5,0:4:9.03:0,9,198	0/0:56,2:11:24.08:0,24,464	0/0:65,0:14:42.13:0,42,828	0/0:25,0:25:72.22:0,72,1389	0/0:22,0:22:51.11:0,51,1073	0/0:29,0:29:78.24:0,78,1562	0/0:21,0:21:51.15:0,51,963	0/0:19,0:19:54.19:0,54,1148	0/0:24,0:24:66.22:0,66,1346	0/0:14,0:14:39.09:0,39,766	0/0:27,0:27:76.49:0,76,1543	0/0:20,0:20:57.15:0,57,1164	0/0:28,0:28:81.26:0,81,1632	0/0:25,0:25:69.22:0,69,1411	1/1:20,0:20:32.95:276,33,0	0/0:24,0:24:63.15:0,63,1284	0/1:17,1:17:38.97:259,0,39	1/1:9,0:7:21.02:244,21,0	1/1:7,1:8:17.97:200,18,0	1/1:12,1:13:5.89:110,6,0	0/0:20,0:20:54.19:0,54,1135	0/0:15,0:15:36.12:0,36,774	0/0:38,0:38:99:0,101,2229	0/0:26,0:26:60.17:0,60,1210	1/1:12,0:12:33.01:324,33,0	1/1:7,1:8:11.96:119,12,0	0/0:11,0:11:27.09:0,27,596
chr10	97592965	.	A	AACAC	966.25	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=4.988;DP=792;FS=1.366;HRun=0;HaplotypeScore=145.2851;InbreedingCoeff=0.5558;MQ=64.81;MQ0=6;MQRankSum=-0.618;QD=10.86;ReadPosRankSum=-3.197;VQSLOD=2.6839;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,17:28:18.14:345,18,0	0/0:12,0:12:4.15:0,4,369	0/0:33,0:24:7.51:0,8,250	0/0:35,0:21:7.64:0,8,99	0/0:22,0:22:51.15:0,51,798	0/0:21,0:21:12.42:0,12,736	0/0:27,0:28:54.38:0,54,881	0/0:43,0:43:86.03:0,86,1328	0/0:27,0:27:60.17:0,60,928	0/0:32,0:33:75.13:0,75,1089	0/0:27,0:28:54.12:0,54,748	0/0:36,0:36:93.26:0,93,1404	0/0:33,0:33:78.25:0,78,1247	0/0:38,0:39:68.61:0,69,1288	0/0:29,0:30:72.15:0,72,1068	1/1:16,5:25:25.32:700,25,0	0/0:39,0:39:80.13:0,80,1288	0/0:29,0:29:21.07:0,21,333	0/1:18,0:17:45.32:45,0,80	0/0:24,0:24:39.13:0,39,299	0/0:39,0:38:38.86:0,39,304	0/0:23,0:23:42.22:0,42,808	0/0:27,0:27:75.21:0,75,1161	0/0:37,0:37:90.24:0,90,1398	0/0:29,0:29:72.21:0,72,1103	0/1:18,0:18:9.06:9,0,218	0/0:28,0:28:36.64:0,37,285	0/0:7,0:7:18.06:0,18,273
chr10	97592979	.	CACAT	C	1030.58	PASS	AB=0.982;AC=10;AF=0.179;AN=56;BaseQRankSum=4.432;DP=809;FS=3.686;HRun=0;HaplotypeScore=145.7033;InbreedingCoeff=0.1992;MQ=57.75;MQ0=8;MQRankSum=-0.962;QD=4.73;ReadPosRankSum=-5.656;VQSLOD=-0.0512;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:41.68:42,0,145	0/0:12,0:12:11.13:0,11,617	0/0:31,0:13:15.10:0,15,202	0/0:31,0:16:11.06:0,11,420	0/0:18,0:18:54.12:0,54,1136	0/0:22,0:22:62.88:0,63,1267	0/0:30,0:31:68.94:0,69,1437	0/0:51,0:51:99:0,113,2314	0/0:28,0:28:71.73:0,72,1450	0/0:38,0:38:88.02:0,88,1871	0/0:31,0:31:86.32:0,86,1477	0/0:35,0:35:96.19:0,96,2072	0/0:30,0:30:81.23:0,81,1944	0/0:38,0:38:89.58:0,90,1958	0/0:32,0:32:95.67:0,96,1748	0/1:25,0:25:99:198,0,175	0/0:38,0:38:99:0,109,2178	0/1:30,0:30:80.98:81,0,440	1/1:22,0:21:51.15:455,51,0	0/1:23,2:25:39.10:105,0,39	1/1:40,2:41:3.18:90,3,0	0/0:22,0:22:48.20:0,48,1275	0/0:31,0:31:92.17:0,92,1814	0/0:37,0:37:99:0,105,2256	0/0:28,0:28:75.11:0,75,1462	0/1:19,0:19:99:143,0,99	0/1:26,1:27:24.17:65,0,24	0/0:6,0:6:17.94:0,18,193
chr10	97592981	.	CAT	C	3425.99	PASS	AB=0.859;AC=14;AF=0.250;AN=56;BaseQRankSum=9.480;DP=814;FS=0.723;HRun=0;HaplotypeScore=109.3499;InbreedingCoeff=0.5764;MQ=58.58;MQ0=8;MQRankSum=-0.368;QD=13.65;ReadPosRankSum=0.164;VQSLOD=3.2720;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:0.89:66,1,0	0/0:11,0:11:8.11:0,8,452	0/0:36,0:18:28.84:0,29,305	0/1:34,0:18:0.02:0,0,317	0/0:19,0:19:57.07:0,57,846	0/0:22,0:22:54.88:0,55,886	0/0:31,0:31:70.65:0,71,1115	0/0:50,0:50:99:0,134,1752	0/0:28,0:28:76.99:0,77,1088	0/0:37,0:37:60.80:0,61,1356	0/0:31,0:31:72.16:0,72,1116	0/0:35,0:35:84.25:0,84,1463	0/0:31,0:31:87.20:0,87,1460	0/0:39,0:39:50.71:0,51,1387	0/0:32,0:32:70.63:0,71,1268	0/1:26,0:26:7.20:231,0,7	0/0:38,0:38:83.44:0,83,1534	0/1:26,3:29:96.45:432,0,96	1/1:21,1:21:55.10:443,55,0	1/1:3,23:26:27.56:594,28,0	1/1:6,37:42:42.04:586,42,0	0/0:22,0:22:48.19:0,48,920	0/0:32,0:32:95.13:0,95,1367	0/0:36,0:36:99:0,108,1709	0/0:27,0:27:77.77:0,78,1120	0/1:2,17:19:20.29:567,0,20	1/1:4,23:27:21.74:507,22,0	0/0:6,0:6:0.21:0,0,132
chr10	97592983	.	TAC	T	903.39	PASS	AB=0.964;AC=10;AF=0.179;AN=56;BaseQRankSum=11.088;DP=819;FS=0.471;HRun=0;HaplotypeScore=118.9449;InbreedingCoeff=0.4428;MQ=57.77;MQ0=8;MQRankSum=0.565;QD=5.41;ReadPosRankSum=4.849;VQSLOD=2.9476;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:20.69:0,21,164	0/0:11,0:11:26.59:0,27,423	0/0:39,0:20:16.63:0,17,307	0/0:36,0:20:43.43:0,43,489	0/0:20,0:20:39.13:0,39,629	0/0:22,0:22:44.74:0,45,688	0/0:30,0:29:63.67:0,64,986	0/0:54,0:54:99:0,100,1638	0/0:27,1:28:63.21:0,63,969	0/0:37,0:37:87.39:0,87,1275	0/0:30,0:30:77.93:0,78,1182	0/0:33,1:34:35.59:0,36,1077	0/0:32,0:32:81.25:0,81,1267	0/0:38,1:39:31.65:0,32,1222	0/0:33,1:34:50.40:0,50,1196	0/0:27,0:27:38.35:0,38,334	0/0:35,1:36:59.28:0,59,1343	0/1:29,0:29:57.88:58,0,384	0/1:21,0:20:22.90:41,0,23	1/1:26,0:26:1.52:246,2,0	1/1:40,0:39:38.94:275,39,0	0/0:21,0:21:48.16:0,48,773	0/0:32,0:32:78.24:0,78,1190	0/0:38,0:38:99:0,99,1503	0/0:28,0:28:54.17:0,54,837	0/1:19,0:19:59.10:159,0,59	1/1:26,0:26:34.21:248,34,0	0/1:5,1:6:30.62:31,0,43
chr10	97594058	.	GAT	G	65.47	PASS	AB=0.786;AC=5;AF=0.192;AN=26;BaseQRankSum=-0.454;DP=184;FS=0.000;HRun=0;HaplotypeScore=34.5440;InbreedingCoeff=-0.0708;MQ=89.70;MQ0=2;MQRankSum=0.091;QD=2.42;ReadPosRankSum=0.514;VQSLOD=0.4511;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:2.98:0,3,22	0/0:3,0:3:3:0,3,26	0/0:16,0:13:0:0,0,0	0/0:37,0:18:2.50:0,2,9	./.	0/1:6,0:7:8.13:8,0,39	./.	./.	0/0:3,0:3:3.01:0,3,44	./.	./.	./.	0/1:3,2:5:54.51:55,0,78	0/0:6,0:6:6.02:0,6,89	./.	./.	0/1:7,3:10:36.26:57,0,36	0/0:10,0:13:4.94:0,5,118	./.	./.	./.	./.	./.	1/1:5,0:5:3.01:33,3,0	./.	0/0:4,0:4:3:0,3,27	./.	0/0:2,0:1:2.98:0,3,22
chr10	97594208	.	TACAC	T	505.79	PASS	AB=0.813;AC=14;AF=0.292;AN=48;BaseQRankSum=3.566;DP=393;FS=5.153;HRun=0;HaplotypeScore=64.6822;InbreedingCoeff=0.5120;MQ=63.27;MQ0=16;MQRankSum=2.126;QD=4.68;ReadPosRankSum=-0.260;VQSLOD=0.9776;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:4:3.01:0,3,71	./.	./.	0/0:10,0:11:5.75:0,6,76	0/0:12,0:12:9.03:0,9,202	0/0:10,0:10:3.37:0,3,234	0/0:16,0:16:5.91:0,6,76	0/0:10,0:10:15.03:0,15,299	0/0:16,0:16:21.06:0,21,375	0/1:6,1:7:27.47:38,0,27	0/0:8,0:9:11.78:0,12,176	0/0:10,0:10:18.06:0,18,407	0/0:9,0:8:21.01:0,21,309	0/0:11,0:11:12.04:0,12,278	1/1:10,3:13:3.01:47,3,0	0/0:30,0:34:53.62:0,54,1001	1/1:7,0:10:3:28,3,0	1/1:5,4:9:12.04:188,12,0	1/1:12,5:16:2.98:21,3,0	0/1:18,8:26:7.95:172,0,8	0/0:6,0:7:11.76:0,12,148	./.	0/0:18,0:23:29.55:0,30,469	0/0:8,0:10:14.77:0,15,247	1/1:9,3:11:9.45:114,9,0	1/1:9,4:12:3.01:47,3,0	0/0:3,0:5:11.78:0,12,225
chr10	97595048	.	GT	G	2026.09	PASS	AB=0.770;AC=17;AF=0.304;AN=56;BaseQRankSum=10.995;DP=597;FS=0.743;HRun=13;HaplotypeScore=75.2349;InbreedingCoeff=0.5885;MQ=77.19;MQ0=0;MQRankSum=-0.840;QD=8.62;ReadPosRankSum=2.714;VQSLOD=3.0012;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,2:41:62.91:0,63,891	0/1:7,1:8:3.89:4,0,124	0/0:27,1:17:4.29:0,4,132	0/1:22,1:19:20.34:20,0,98	0/0:22,1:25:34.95:0,35,499	0/0:16,0:20:21.54:0,22,353	0/0:18,2:20:23.08:0,23,365	0/0:22,0:25:56.67:0,57,487	0/0:13,1:14:14.15:0,14,299	0/0:14,0:17:35.72:0,36,315	0/0:17,0:19:47.86:0,48,440	0/0:19,3:22:13.28:0,13,447	0/0:13,0:13:36.03:0,36,339	0/0:11,1:12:11.11:0,11,256	0/0:18,1:19:26.23:0,26,416	1/1:4,2:31:26.50:150,27,0	0/0:27,1:29:44.42:0,44,551	1/1:4,0:17:19.04:60,19,0	1/1:5,12:17:35.74:263,36,0	1/1:10,17:29:60.66:427,61,0	1/1:4,12:18:11.82:239,12,0	0/0:13,1:17:18.93:0,19,307	0/1:13,3:16:23.68:24,0,269	0/0:14,0:14:36.03:0,36,339	0/0:25,1:26:41.18:0,41,558	0/1:8,20:29:9.32:370,0,9	1/1:5,29:34:74.50:547,74,0	0/1:4,6:11:6.26:114,0,6
chr10	97595157	.	TTC	T	4955.49	PASS	AB=0.774;AC=18;AF=0.321;AN=56;BaseQRankSum=15.204;DP=606;FS=2.113;HRun=0;HaplotypeScore=99.4550;InbreedingCoeff=0.5819;MQ=78.24;MQ0=2;MQRankSum=-0.699;QD=21.83;ReadPosRankSum=2.134;VQSLOD=5.0214;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,33:41:99:1172,99,0	0/1:7,2:10:42.32:42,0,309	0/0:32,0:26:45.14:0,45,691	0/0:39,0:32:33.33:0,33,472	0/0:18,1:19:17.99:0,18,783	0/0:25,0:25:33.07:0,33,1020	0/0:24,2:26:17.99:0,18,777	0/0:23,0:23:33.10:0,33,493	0/0:15,2:17:2.94:0,3,541	0/0:21,1:22:18.02:0,18,773	0/0:18,0:18:48.16:0,48,765	0/0:18,1:19:11.97:0,12,681	0/0:21,0:21:54.18:0,54,863	0/0:12,0:12:21.06:0,21,312	0/0:18,1:19:5.96:0,6,588	1/1:9,29:38:89.80:1063,90,0	0/0:38,0:38:90.28:0,90,1420	1/1:3,19:22:42.13:507,42,0	1/1:4,8:12:24.05:275,24,0	1/1:3,12:15:33.10:398,33,0	0/1:3,7:10:26.86:163,0,27	0/0:12,1:13:2.91:0,3,515	0/0:9,0:10:3.91:0,4,225	0/0:26,0:26:54.18:0,54,863	0/1:14,4:18:63.43:63,0,529	1/1:1,12:12:30.09:362,30,0	1/1:8,24:35:77.73:874,78,0	0/1:10,2:12:36.35:36,0,389
chr10	97597212	.	TTCACAGCA	T	306.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.367;DP=555;FS=6.422;HRun=0;HaplotypeScore=145.3109;InbreedingCoeff=0.8607;MQ=90.53;MQ0=0;MQRankSum=-2.746;QD=38.37;ReadPosRankSum=0.029;VQSLOD=2.5530;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.25:0,81,3231	0/0:2,0:2:6.02:0,6,266	0/0:21,0:21:36.07:0,36,1558	0/0:29,0:29:75.26:0,75,2968	0/0:26,0:26:63.20:0,63,2584	0/0:29,0:29:81.24:0,81,3251	0/0:22,0:22:63.20:0,63,2412	0/0:25,0:25:72.20:0,72,2502	0/0:16,0:16:42.14:0,42,1814	0/0:23,0:23:66.13:0,66,2502	0/0:16,0:16:39.13:0,39,1692	0/0:21,0:21:60.21:0,60,2641	0/0:28,0:28:78.27:0,78,3352	0/0:18,0:18:51.18:0,51,2152	0/0:22,0:22:60.17:0,60,2405	0/0:25,0:25:72.25:0,72,3126	0/0:25,0:25:66.23:0,66,2772	1/1:0,8:8:15.05:395,15,0	0/0:20,0:20:54.19:0,54,2361	0/0:16,0:16:48.15:0,48,1843	0/0:25,0:25:75.24:0,75,3079	0/0:8,0:8:21.07:0,21,822	0/0:10,0:10:27.09:0,27,1195	0/0:24,0:24:69.24:0,69,2908	0/0:19,0:19:54.19:0,54,2384	0/0:20,0:20:54.18:0,54,2103	0/0:24,0:24:72.25:0,72,3072	0/0:4,0:4:12.04:0,12,531
chr10	97597281	.	CT	C	132.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.241;DP=539;FS=1.448;HRun=3;HaplotypeScore=66.5547;InbreedingCoeff=0.9820;MQ=80.13;MQ0=0;MQRankSum=-3.154;QD=22.01;ReadPosRankSum=1.222;VQSLOD=3.1255;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.15:0,72,989	0/0:6,0:6:18.06:0,18,259	0/0:22,0:22:50.51:0,51,707	0/0:19,0:19:48.12:0,48,638	0/0:22,0:22:63.13:0,63,859	0/0:21,0:21:60.20:0,60,859	0/0:16,0:16:48.15:0,48,669	0/0:20,0:20:60.19:0,60,844	0/0:17,0:17:48.16:0,48,691	0/0:20,0:20:57.19:0,57,821	0/0:19,0:19:48.16:0,48,690	0/0:18,0:18:51.17:0,51,734	0/0:30,0:30:87.24:0,87,1208	0/0:20,0:20:60.20:0,60,859	0/0:17,0:17:51.17:0,51,731	0/0:20,0:20:60.15:0,60,840	0/0:26,0:26:72.16:0,72,986	1/1:0,6:6:18.06:223,18,0	0/0:26,0:26:75.13:0,75,991	0/0:19,0:19:54.18:0,54,776	0/0:29,0:29:78.21:0,78,1082	0/0:16,0:16:48.10:0,48,648	0/0:8,0:8:24.06:0,24,326	0/0:22,0:22:66.21:0,66,928	0/0:17,0:16:45.11:0,45,624	0/0:23,0:23:66.22:0,66,946	0/0:20,0:20:57.15:0,57,793	0/0:15,0:15:45.07:0,45,582
chr10	97598119	.	A	AG	231.92	PASS	AB=0.832;AC=7;AF=0.125;AN=56;BaseQRankSum=8.955;DP=400;FS=16.863;HRun=0;HaplotypeScore=87.2309;InbreedingCoeff=-0.1528;MQ=39.62;MQ0=19;MQRankSum=-5.387;QD=1.77;ReadPosRankSum=3.127;VQSLOD=0.6658;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:10:28.64:0,29,374	0/0:1,0:1:3.01:0,3,42	0/0:28,0:5:14.96:0,15,185	0/0:27,0:6:15.04:0,15,181	0/1:24,4:26:8.69:9,0,697	0/0:14,0:13:36.12:0,36,503	0/0:6,0:6:18.06:0,18,251	0/0:27,0:22:54.18:0,54,752	0/0:10,0:10:30.10:0,30,419	0/1:9,2:11:13.15:13,0,265	0/0:13,2:15:15.25:0,15,381	0/0:10,0:9:27.09:0,27,377	0/0:14,0:13:39.13:0,39,538	0/0:6,0:5:12.04:0,12,168	0/0:9,0:8:24.08:0,24,335	0/0:12,0:12:33.08:0,33,440	0/0:7,0:7:21.07:0,21,293	0/0:4,0:4:12.04:0,12,147	0/0:13,0:13:39.13:0,39,542	0/1:25,5:29:84.99:85,0,571	0/0:3,0:3:9.03:0,9,126	0/1:9,4:13:72.99:73,0,271	0/1:10,4:13:67.98:68,0,277	0/0:16,0:15:13.55:0,14,284	0/1:12,4:16:7.88:8,0,389	0/0:14,2:16:24.80:0,25,449	0/1:17,2:18:99:101,0,463	0/0:19,0:18:42.11:0,42,566
chr10	97598160	.	GGAAAGAAA	G	444.28	PASS	AB=1.000;AC=3;AF=0.058;AN=52;BaseQRankSum=2.997;DP=496;FS=9.611;HRun=0;HaplotypeScore=176.5170;InbreedingCoeff=0.5561;MQ=43.71;MQ0=16;MQRankSum=-3.777;QD=12.69;ReadPosRankSum=1.932;VQSLOD=2.0164;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:51.12:0,51,1195	0/0:7,0:7:18.06:0,18,566	./.	./.	0/0:33,0:31:39.12:0,39,1029	0/0:23,0:22:30.10:0,30,749	0/0:13,0:13:9.51:0,10,355	0/0:26,0:20:0:0,0,0	0/0:12,0:12:15.05:0,15,385	0/0:22,0:21:39.13:0,39,1308	0/0:24,0:24:33.25:0,33,804	0/0:13,0:12:14.98:0,15,309	0/0:20,0:19:33.11:0,33,989	0/1:11,0:10:1.87:2,0,428	0/0:16,0:15:30.10:0,30,735	0/0:15,0:15:27.07:0,27,564	0/0:18,0:18:33.06:0,33,1023	0/0:7,0:7:18.04:0,18,123	0/0:18,0:16:24.08:0,24,690	0/0:30,0:29:33.47:0,33,962	0/0:13,0:13:30.08:0,30,619	0/0:16,0:15:3.01:0,3,101	0/0:18,0:17:3.15:0,3,461	0/0:22,0:20:27.02:0,27,584	1/1:11,10:24:24.08:536,24,0	0/0:24,0:24:30.10:0,30,791	0/0:20,0:19:27.06:0,27,804	0/0:25,0:24:35.17:0,35,469
chr10	97600981	.	AAAG	A	538.55	PASS	AB=0.980;AC=14;AF=0.250;AN=56;BaseQRankSum=3.404;DP=498;FS=11.970;HRun=0;HaplotypeScore=77.8463;InbreedingCoeff=-0.1585;MQ=37.41;MQ0=36;MQRankSum=1.016;QD=2.15;ReadPosRankSum=0.527;VQSLOD=0.7630;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:25:5.97:6,0,353	0/0:14,0:14:18.47:0,18,254	0/0:12,0:1:2.60:0,3,10	0/0:21,0:2:0:0,0,0	0/1:24,0:22:28.29:28,0,203	0/0:13,0:13:25.27:0,25,170	0/0:13,0:10:15.89:0,16,160	0/0:15,0:9:13.53:0,14,154	0/0:12,0:11:8.37:0,8,184	0/0:15,0:12:24.60:0,25,289	0/1:15,0:15:1.94:2,0,99	0/0:23,0:22:8.26:0,8,377	0/1:11,0:10:8.55:9,0,106	0/0:22,0:19:13.91:0,14,206	0/1:24,1:24:26.68:27,0,228	1/1:16,2:17:4.34:183,4,0	0/0:27,0:24:45.06:0,45,371	0/1:12,0:8:19.09:19,0,23	0/1:15,1:9:42.75:75,0,43	0/1:16,2:18:99:123,0,102	0/0:7,0:3:2.94:0,3,18	0/0:17,0:15:36.22:0,36,268	0/0:12,0:11:8.44:0,8,110	0/0:24,0:18:9.55:0,10,166	0/1:20,0:18:29.64:30,0,203	0/1:20,1:19:51.73:141,0,52	0/1:16,0:12:8.36:25,0,8	0/1:15,0:10:17.08:17,0,96
chr10	97600982	.	AAG	A	572.31	PASS	AB=0.972;AC=24;AF=0.429;AN=56;BaseQRankSum=2.858;DP=500;FS=32.321;HRun=0;HaplotypeScore=71.9374;InbreedingCoeff=-0.4945;MQ=37.49;MQ0=35;MQRankSum=1.969;QD=1.43;ReadPosRankSum=1.471;VQSLOD=-0.2422;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,6:25:30.97:31,0,239	0/1:14,0:14:3.58:4,0,167	1/1:14,0:1:1.82:5,2,0	0/0:21,0:2:0:0,0,0	0/1:24,0:22:38.46:38,0,107	0/1:13,0:13:5.11:5,0,51	0/1:10,4:11:6.46:6,0,94	0/0:15,0:9:14.20:0,14,118	0/0:12,0:11:7.99:0,8,127	0/0:16,0:13:23.53:0,24,231	0/1:14,0:14:26.66:27,0,44	0/1:23,0:22:0.24:0,0,203	0/1:11,0:10:9.04:9,0,70	0/1:22,0:19:24.55:25,0,97	0/1:25,0:24:55.54:56,0,126	1/1:18,0:17:0.62:157,1,0	0/0:28,0:25:2.99:0,3,154	0/1:12,0:8:16.79:17,0,35	0/1:17,0:10:42.55:62,0,43	0/1:16,3:19:86.50:87,0,105	0/0:7,0:3:2.94:0,3,18	0/1:18,0:16:10.35:10,0,160	0/1:11,0:10:13.02:13,0,62	0/1:23,0:17:12.46:12,0,61	0/1:19,0:17:30.87:31,0,135	0/1:21,0:19:62.79:63,0,67	0/1:16,0:12:10.21:14,0,10	0/1:13,1:10:42.34:42,0,72
chr10	97604238	.	CAAA	C	4017.56	PASS	AB=0.750;AC=15;AF=0.268;AN=56;BaseQRankSum=7.979;DP=642;FS=1.293;HRun=13;HaplotypeScore=106.1222;InbreedingCoeff=0.9048;MQ=76.59;MQ0=0;MQRankSum=-1.750;QD=24.80;ReadPosRankSum=4.781;VQSLOD=2.9102;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:40:45.61:0,46,175	0/0:10,0:11:30.10:0,30,549	0/0:40,0:28:50.01:0,50,658	0/0:17,0:12:11.97:0,12,217	0/0:21,0:22:54.17:0,54,990	0/0:22,0:22:66.17:0,66,1148	0/0:16,0:17:37.35:0,37,660	0/0:37,1:43:64.89:0,65,1627	0/0:15,0:17:41.82:0,42,772	0/0:26,0:30:67.42:0,67,1145	0/0:16,0:17:40.38:0,40,753	0/0:24,0:28:60.15:0,60,1016	0/0:18,0:18:51.17:0,51,930	0/0:18,0:18:48.16:0,48,853	0/0:21,0:24:60.16:0,60,1055	1/1:6,20:26:48.08:584,48,0	0/0:26,0:30:84.20:0,84,1420	1/1:3,14:17:42.09:511,42,0	1/1:3,16:19:48.08:557,48,0	1/1:5,18:24:54.05:638,54,0	1/1:6,13:22:34.27:398,34,0	0/0:26,0:26:60.19:0,60,1095	0/0:19,0:20:51.17:0,51,939	0/0:18,0:20:54.14:0,54,968	0/0:14,0:17:36.09:0,36,626	1/1:5,23:28:69.16:839,69,0	1/1:5,15:20:39.06:473,39,0	0/1:4,1:6:18.45:18,0,235
chr10	97604374	.	A	ACT	9815.68	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-6.932;DP=564;FS=6.443;HRun=0;HaplotypeScore=63.4864;InbreedingCoeff=0.9982;MQ=91.25;MQ0=0;MQRankSum=-2.248;QD=50.86;ReadPosRankSum=2.513;VQSLOD=5.7704;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:34:93.32:1742,93,0	0/0:7,0:7:21.07:0,21,308	0/0:25,0:25:66.22:0,66,969	0/0:21,0:21:57.11:0,57,794	0/0:16,0:16:45.15:0,45,662	0/0:23,0:23:66.21:0,66,949	0/0:22,0:22:63.21:0,63,928	0/0:36,0:36:99:0,105,1525	0/0:21,0:21:60.20:0,60,883	0/0:12,0:12:33.11:0,33,486	0/0:18,0:18:54.17:0,54,774	0/0:25,0:25:72.24:0,72,1060	0/0:19,0:19:42.14:0,42,618	0/0:8,0:8:24.07:0,24,334	0/0:25,0:25:72.24:0,72,1059	1/1:1,19:20:48.16:899,48,0	0/0:21,0:21:60.20:0,60,883	1/1:0,25:25:72.25:1349,72,0	1/1:4,19:23:57.20:1068,57,0	1/1:0,15:15:45.15:843,45,0	1/1:0,26:26:72.25:1349,72,0	0/0:10,0:10:30.10:0,30,442	0/0:20,0:20:60.20:0,60,883	0/0:17,0:17:48.16:0,48,707	0/0:18,0:18:54.17:0,54,776	1/1:1,23:24:69.24:1279,69,0	1/1:1,25:26:69.24:1287,69,0	0/0:7,0:7:21.07:0,21,309
chr10	97608429	.	AGACTAC	A	9602.74	PASS	AB=0.512;AC=15;AF=0.268;AN=56;BaseQRankSum=15.660;DP=719;FS=5.299;HRun=0;HaplotypeScore=153.6591;InbreedingCoeff=0.9063;MQ=86.78;MQ0=0;MQRankSum=-16.946;QD=52.76;ReadPosRankSum=-0.895;VQSLOD=4.7472;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,44:50:99:2665,111,0	0/0:7,0:7:21.07:0,21,686	0/0:31,0:31:87.27:0,87,2870	0/0:25,0:24:66.14:0,66,2064	0/0:28,0:28:84.29:0,84,2952	0/0:25,0:25:75.24:0,75,2618	0/0:28,0:28:78.27:0,78,2747	0/0:29,0:29:87.30:0,87,2984	0/0:28,0:28:81.28:0,81,2852	0/0:30,0:30:90.28:0,90,3057	0/0:16,0:16:45.15:0,45,1621	0/0:39,0:39:99:0,111,3967	0/0:32,0:32:93.30:0,93,3264	0/0:37,0:37:99:0,111,3824	0/0:30,0:30:87.30:0,87,3112	1/1:0,29:29:81.28:1945,81,0	0/0:33,0:33:99:0,99,3454	1/1:4,10:14:18.02:380,18,0	1/1:5,20:25:60.17:1368,60,0	1/1:2,10:12:26.90:438,27,0	1/1:2,12:14:21.07:492,21,0	0/0:23,0:23:69.22:0,69,2382	0/0:24,0:24:72.25:0,72,2567	0/0:41,0:41:99:0,123,4273	0/0:22,0:22:66.23:0,66,2321	0/1:1,20:21:21.97:1378,0,22	1/1:1,16:17:39.13:936,39,0	0/0:9,0:9:27.09:0,27,970
chr10	97608629	.	C	CAAAA	4756.27	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=9.341;DP=585;FS=0.395;HRun=11;HaplotypeScore=108.0935;InbreedingCoeff=0.9819;MQ=65.06;MQ0=0;MQRankSum=-3.112;QD=27.81;ReadPosRankSum=-1.032;VQSLOD=3.2490;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:23:41.96:483,42,0	0/0:10,0:10:27.08:0,27,368	0/0:4,0:6:11.97:0,12,139	0/0:14,0:15:12.09:0,12,167	0/0:29,0:32:79.44:0,79,1031	0/0:22,0:25:55.32:0,55,722	0/0:23,0:25:63.11:0,63,824	0/0:29,0:29:60.03:0,60,818	0/0:13,0:13:26.98:0,27,350	0/0:28,0:28:57.02:0,57,776	0/0:25,0:26:67.39:0,67,902	0/0:21,0:21:51.03:0,51,694	0/0:26,0:26:75.21:0,75,1016	0/0:18,0:19:51.09:0,51,678	0/0:23,0:24:67.40:0,67,851	1/1:4,0:17:32.34:258,32,0	0/0:26,0:26:72.19:0,72,981	1/1:4,0:30:58.58:346,59,0	1/1:10,4:24:60.19:1064,60,0	1/1:8,10:22:48.16:931,48,0	1/1:5,6:15:18.06:352,18,0	0/0:19,0:20:49.35:0,49,641	0/0:18,0:18:48.13:0,48,654	0/0:17,0:17:48.13:0,48,653	0/0:26,0:27:76.39:0,76,974	1/1:12,11:25:57.18:1150,57,0	1/1:4,6:14:11.87:173,12,0	0/0:7,0:7:21.07:0,21,286
chr10	97608937	.	GC	G	9397.76	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.346;DP=745;FS=8.973;HRun=1;HaplotypeScore=72.9195;InbreedingCoeff=0.9996;MQ=85.28;MQ0=0;MQRankSum=-2.600;QD=38.83;ReadPosRankSum=2.203;VQSLOD=5.2929;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,43:43:99:1636,117,0	0/0:13,0:13:39.13:0,39,621	0/0:24,0:24:69.20:0,69,1041	0/0:23,0:23:63.21:0,63,942	0/0:27,0:27:81.26:0,81,1265	0/0:21,0:21:63.21:0,63,1007	0/0:33,0:33:99:0,99,1539	0/0:34,0:33:99:0,102,1567	0/0:32,0:32:96.31:0,96,1509	0/0:21,0:21:63.21:0,63,1002	0/0:16,0:16:48.16:0,48,767	0/0:29,0:29:87.28:0,87,1367	0/0:26,0:26:78.27:0,78,1240	0/0:35,0:35:99:0,105,1633	0/0:28,0:28:84.27:0,84,1319	1/1:0,15:15:42.14:587,42,0	0/0:34,0:34:99:0,102,1623	1/1:0,25:25:69.23:965,69,0	1/1:0,28:28:84.26:1140,84,0	1/1:0,16:16:48.16:671,48,0	1/1:0,57:57:99:2265,163,0	0/0:13,0:13:39.12:0,39,600	0/0:16,0:16:48.16:0,48,759	0/0:35,0:35:99:0,105,1655	0/0:32,0:32:96.33:0,96,1524	1/1:1,24:25:24.25:916,24,0	1/1:0,33:33:87.29:1217,87,0	0/0:11,0:11:33.06:0,33,470
chr10	97609459	.	G	GT	6607.09	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-13.815;DP=649;FS=3.285;HRun=6;HaplotypeScore=60.3455;InbreedingCoeff=0.9982;MQ=77.42;MQ0=0;MQRankSum=-3.359;QD=31.46;ReadPosRankSum=1.879;VQSLOD=5.5058;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,29:32:81.26:1019,81,0	0/0:8,0:8:21.05:0,21,214	0/0:14,0:14:27.06:0,27,275	0/0:13,0:14:20.91:0,21,297	0/0:30,0:30:75.16:0,75,765	0/0:22,0:22:63.14:0,63,643	0/0:16,0:16:39.09:0,39,398	0/0:26,0:25:69.15:0,69,699	0/0:27,0:27:72.16:0,72,735	0/0:34,0:34:96.21:0,96,980	0/0:23,0:23:60.14:0,60,612	0/0:29,0:29:81.14:0,81,811	0/0:32,0:32:87.20:0,87,887	0/0:17,0:17:48.11:0,48,490	0/0:26,0:26:72.16:0,72,735	1/1:4,13:17:39.12:490,39,0	0/0:21,0:21:57.13:0,57,581	1/1:2,22:24:63.20:793,63,0	1/1:4,15:19:45.14:566,45,0	1/1:5,33:38:99:1278,102,0	1/1:3,9:12:27.09:340,27,0	0/0:17,0:17:42.07:0,42,421	0/0:21,0:21:60.13:0,60,612	0/0:25,0:25:69.14:0,69,697	0/0:23,0:23:60.10:0,60,601	1/1:5,28:32:56.66:1026,57,0	1/1:2,33:35:87.28:1094,87,0	0/0:14,0:14:39.09:0,39,398
chr10	97609653	.	G	GTACA	274.66	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=-1.697;DP=724;FS=6.447;HRun=0;HaplotypeScore=141.2073;InbreedingCoeff=0.9165;MQ=59.71;MQ0=7;MQRankSum=-0.921;QD=11.44;ReadPosRankSum=-2.005;VQSLOD=2.6497;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:24:14.21:362,14,0	0/0:14,0:14:27.09:0,27,438	0/0:23,0:8:9.03:0,9,146	./.	0/0:36,0:36:75.23:0,75,1165	0/0:24,0:24:60.20:0,60,965	0/0:16,0:16:36.12:0,36,581	0/0:45,0:45:66.20:0,66,1021	0/0:22,0:22:45.15:0,45,724	0/0:35,0:35:81.28:0,81,1310	0/0:24,0:24:46.28:0,46,1002	0/0:21,0:21:45.15:0,45,730	0/0:26,0:26:63.22:0,63,1018	0/0:26,0:26:60.16:0,60,900	0/0:42,0:42:78.25:0,78,1208	0/0:3,0:16:34.57:0,35,250	0/0:14,0:14:33.11:0,33,521	0/0:29,0:29:57.15:0,57,879	0/0:20,0:20:27:0,27,404	0/0:30,0:30:63.22:0,63,1016	0/0:27,0:27:66.23:0,66,1062	0/0:23,0:23:57.19:0,57,924	0/0:20,0:20:57.18:0,57,897	0/0:25,0:25:57.19:0,57,911	0/0:22,0:22:57.16:0,57,855	0/0:33,0:33:69.22:0,69,1093	0/0:36,0:36:78.24:0,78,1234	0/0:19,0:19:18.06:0,18,292
chr10	97610010	.	GTCCCTGACACAAAGTAAAATGAGGTCTTAT	G	10524.12	PASS	AB=0.714;AC=15;AF=0.268;AN=56;BaseQRankSum=11.375;DP=680;FS=6.458;HRun=0;HaplotypeScore=494.4516;InbreedingCoeff=0.8569;MQ=89.10;MQ0=0;MQRankSum=-9.705;QD=76.26;ReadPosRankSum=5.038;VQSLOD=2.0760;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,11:20:18.06:1421,18,0	0/0:10,0:10:27.09:0,27,3467	0/0:25,0:25:66.23:0,66,4566	0/0:33,0:33:84.25:0,84,5258	0/0:25,0:25:72.25:0,72,7485	0/0:22,0:22:63.22:0,63,7351	0/0:28,0:28:75.26:0,75,7821	0/0:32,0:32:81.28:0,81,6590	0/0:35,0:35:99:0,105,11688	0/0:36,0:36:99:0,102,11020	0/0:24,0:24:66.23:0,66,6861	0/0:32,0:32:93.32:0,93,10941	0/0:36,0:36:99:0,99,11397	0/0:24,0:24:69.24:0,69,8874	0/0:30,0:30:81.26:0,81,10096	1/1:5,8:13:18.06:1421,18,0	0/0:42,0:42:99:0,126,14879	1/1:12,4:16:6.02:469,6,0	1/1:9,6:15:18.06:1060,18,0	1/1:7,11:18:24.08:1864,24,0	1/1:12,8:20:4.09:434,4,0	0/0:32,0:32:96.32:0,96,10032	0/0:25,0:25:72.25:0,72,8944	0/0:28,0:28:81.28:0,81,9031	0/0:14,0:14:39.13:0,39,4114	0/1:12,8:20:99:1488,0,1203	1/1:4,12:16:30.10:2369,30,0	0/0:9,0:9:27.09:0,27,3748
chr10	97610899	.	AT	A	7621.59	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=17.981;DP=586;FS=3.765;HRun=1;HaplotypeScore=76.7033;InbreedingCoeff=0.9997;MQ=76.95;MQ0=0;MQRankSum=-1.889;QD=38.11;ReadPosRankSum=1.010;VQSLOD=5.4712;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:63.21:881,63,0	0/0:10,0:10:30.08:0,30,453	0/0:16,0:16:45.05:0,45,613	0/0:15,0:15:42.06:0,42,589	0/0:24,0:24:72.23:0,72,1120	0/0:24,0:24:72.21:0,72,1104	0/0:12,0:12:36.09:0,36,524	0/0:26,0:26:78.24:0,78,1200	0/0:14,0:13:39.10:0,39,576	0/0:23,0:23:69.24:0,69,1103	0/0:23,0:23:69.20:0,69,1053	0/0:18,0:18:54.14:0,54,792	0/0:22,0:22:66.19:0,66,1007	0/0:18,0:18:54.18:0,54,857	0/0:22,0:22:66.23:0,66,1053	1/1:0,27:27:72.20:975,72,0	0/0:18,0:18:54.16:0,54,834	1/1:0,26:26:75.25:1049,75,0	1/1:0,27:27:81.25:1087,81,0	1/1:0,31:31:90.23:1199,90,0	1/1:0,13:13:36.12:503,36,0	0/0:28,0:28:81.28:0,81,1294	0/0:23,0:23:69.22:0,69,1076	0/0:9,0:9:27.09:0,27,428	0/0:22,0:22:66.19:0,66,1005	1/1:0,21:21:63.21:878,63,0	1/1:0,33:33:75.25:1049,75,0	0/0:19,0:19:57.19:0,57,910
chr10	97611219	.	G	GTTCTATGAT	17987.88	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-4.448;DP=670;FS=7.541;HRun=0;HaplotypeScore=169.4935;InbreedingCoeff=0.9741;MQ=80.25;MQ0=0;MQRankSum=-14.820;QD=103.98;ReadPosRankSum=-1.013;VQSLOD=5.0545;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,15:27:57.20:2507,57,0	0/0:11,0:11:30.09:0,30,856	0/0:24,0:24:65.41:0,65,1794	0/0:22,0:22:50.50:0,51,1258	0/0:34,0:34:93.24:0,93,2462	0/0:20,0:20:60.21:0,60,1818	0/0:26,0:26:78.27:0,78,2358	0/0:31,0:30:87.25:0,87,2317	0/0:23,0:23:66.18:0,66,1723	0/0:26,0:26:75.24:0,75,2074	0/0:31,0:31:90.29:0,90,2617	0/0:22,0:22:66.21:0,66,1932	0/0:30,0:30:87.30:0,87,2634	0/0:22,0:22:63.22:0,63,1919	0/0:44,0:44:99:0,129,3880	1/1:6,13:22:54.18:2539,54,0	0/0:31,0:31:90.31:0,90,2735	1/1:9,4:18:36.12:1671,36,0	1/1:10,6:20:54.17:2011,54,0	1/1:12,12:26:69.19:3031,69,0	1/1:6,8:18:36.12:1551,36,0	0/0:20,0:20:54.17:0,54,1603	0/0:14,0:14:39.13:0,39,1208	0/0:31,0:31:93.30:0,93,2755	0/0:25,0:25:75.19:0,75,1957	1/1:5,12:21:3.91:2223,4,0	1/1:1,16:21:51.18:2453,51,0	0/0:10,0:10:27.09:0,27,838
chr10	97611434	.	ACCACCCCTTATTTT	A	10016.58	PASS	AB=0.594;AC=15;AF=0.268;AN=56;BaseQRankSum=13.425;DP=537;FS=19.537;HRun=0;HaplotypeScore=209.8898;InbreedingCoeff=0.9068;MQ=76.56;MQ0=0;MQRankSum=-12.718;QD=81.44;ReadPosRankSum=2.305;VQSLOD=3.2369;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:16:30.10:1213,30,0	0/0:12,0:12:36.12:0,36,2179	0/0:21,0:21:60.21:0,60,3360	0/0:17,0:17:51.17:0,51,2317	0/0:31,0:31:93.32:0,93,6244	0/0:21,0:21:63.22:0,63,3842	0/0:14,0:14:42.14:0,42,2617	0/0:33,0:33:96.33:0,96,5535	0/0:21,0:21:63.22:0,63,4246	0/0:20,0:20:57.20:0,57,3751	0/0:19,0:19:57.20:0,57,3522	0/0:27,0:27:81.28:0,81,5231	0/0:23,0:23:69.24:0,69,4775	0/0:23,0:23:63.20:0,63,3855	0/0:20,0:20:60.20:0,60,3521	1/1:0,12:12:27.09:1168,27,0	0/0:26,0:26:78.27:0,78,5174	1/1:1,17:18:27.09:1146,27,0	1/1:6,11:17:39.12:1451,39,0	1/1:1,15:16:42.14:1708,42,0	1/1:1,12:13:18.06:718,18,0	0/0:20,0:20:60.21:0,60,3768	0/0:24,0:24:72.24:0,72,4590	0/0:19,0:19:57.20:0,57,3809	0/0:13,0:13:39.13:0,39,2405	0/1:6,13:19:99:1317,0,175	1/1:0,12:12:30.10:1295,30,0	0/0:10,0:10:30.10:0,30,1811
chr10	97611604	.	CTTG	C	4279.94	PASS	AB=0.536;AC=14;AF=0.250;AN=56;BaseQRankSum=14.594;DP=627;FS=18.046;HRun=0;HaplotypeScore=103.9898;InbreedingCoeff=0.8084;MQ=61.48;MQ0=0;MQRankSum=-12.895;QD=28.16;ReadPosRankSum=-0.003;VQSLOD=3.8674;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:32:51.06:753,51,0	0/0:14,0:14:42.10:0,42,837	0/0:23,0:21:43.68:0,44,807	0/0:18,0:17:45.12:0,45,817	0/0:24,0:24:66.20:0,66,1371	0/0:21,0:21:63.20:0,63,1329	0/0:18,0:18:54.13:0,54,1025	0/0:33,0:33:90.27:0,90,1815	0/0:26,0:26:72.25:0,72,1564	0/0:34,0:34:84.28:0,84,1804	0/0:20,0:20:54.09:0,54,1083	0/0:23,0:23:66.15:0,66,1287	0/0:29,0:29:87.19:0,87,1751	0/0:33,0:33:99:0,99,2103	0/0:31,0:31:90.26:0,90,1802	0/1:2,12:14:36.08:400,0,36	0/0:31,0:31:87.24:0,87,1811	1/1:1,18:19:27.09:432,27,0	1/1:2,14:15:39.09:575,39,0	1/1:1,8:9:24.08:383,24,0	1/1:7,15:22:24.04:344,24,0	0/0:18,0:18:48.14:0,48,1012	0/0:13,0:13:33.11:0,33,727	0/0:23,0:23:63.16:0,63,1262	0/0:28,0:27:78.24:0,78,1606	0/1:3,21:24:66.26:866,0,66	1/1:3,13:16:33.11:527,33,0	0/0:15,0:15:45.15:0,45,988
chr10	97613231	.	G	GTCTGCATGACCCTAT	33719.73	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-2.244;DP=746;FS=10.105;HRun=0;HaplotypeScore=284.0646;InbreedingCoeff=0.9998;MQ=80.33;MQ0=0;MQRankSum=-18.558;QD=123.97;ReadPosRankSum=-0.290;VQSLOD=3.4655;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,13:45:72.72:4284,73,0	0/0:10,0:10:30.10:0,30,1272	0/0:16,0:16:30.99:0,31,1107	0/0:29,0:29:75.25:0,75,2436	0/0:17,0:17:48.16:0,48,1864	0/0:27,0:27:78.27:0,78,3214	0/0:20,0:20:54.18:0,54,2215	0/0:35,0:35:87.28:0,87,3184	0/0:17,0:17:51.18:0,51,2193	0/0:30,0:30:81.27:0,81,3143	0/0:12,0:12:36.12:0,36,1559	0/0:35,0:35:99:0,99,4183	0/0:23,0:23:63.22:0,63,2645	0/0:31,0:31:90.31:0,90,3714	0/0:33,0:33:90.31:0,90,3655	1/1:21,16:38:99:6545,105,0	0/0:30,0:30:78.26:0,78,3194	1/1:8,6:21:33.11:2120,33,0	1/1:7,8:18:51.15:2796,51,0	1/1:17,15:36:69.24:4040,69,0	1/1:13,6:27:39.13:2261,39,0	0/0:24,0:24:66.23:0,66,2723	0/0:23,0:23:60.14:0,60,2158	0/0:24,0:24:69.24:0,69,2923	0/0:25,0:25:72.24:0,72,2897	1/1:27,11:44:99:5917,108,0	1/1:17,18:42:93.32:5757,93,0	0/0:13,0:13:39.13:0,39,1396
chr10	97613706	.	TGTGC	T	3233.06	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=8.362;DP=672;FS=3.365;HRun=0;HaplotypeScore=123.7717;InbreedingCoeff=0.9539;MQ=64.74;MQ0=23;MQRankSum=-5.459;QD=18.47;ReadPosRankSum=-0.291;VQSLOD=3.4206;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,6:36:58.41:925,58,0	0/0:14,0:14:28.40:0,28,549	0/0:34,0:11:22.73:0,23,320	0/0:37,0:9:17.65:0,18,234	0/0:26,0:25:19.64:0,20,1288	0/0:27,0:27:63.66:0,64,1415	0/0:27,0:26:62.99:0,63,1450	0/0:20,0:20:55.97:0,56,1086	0/0:23,0:22:55.57:0,56,1143	0/0:25,0:25:72.19:0,72,1565	0/0:13,0:13:36.12:0,36,885	0/0:30,0:28:47.49:0,47,1190	0/0:23,0:23:38.97:0,39,892	0/0:25,0:24:52.87:0,53,1095	0/0:33,0:31:47.90:0,48,1434	1/1:27,0:27:15.05:237,15,0	0/0:32,0:31:72.25:0,72,1657	1/1:15,0:15:42.33:596,42,0	1/1:13,0:13:17.74:440,18,0	1/1:14,0:14:9.03:144,9,0	1/1:22,0:19:6.01:65,6,0	0/0:18,0:18:20.11:0,20,778	0/0:20,0:20:44.93:0,45,969	0/0:45,0:43:84.09:0,84,2158	0/0:22,0:21:56.38:0,56,1181	1/1:25,0:25:54.50:760,55,0	1/1:21,0:18:20.61:266,21,0	0/0:3,0:3:9.03:0,9,174
chr10	97613708	.	TGCGTAC	T	3634.41	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=7.197;DP=656;FS=12.665;HRun=0;HaplotypeScore=140.3983;InbreedingCoeff=0.9568;MQ=64.27;MQ0=23;MQRankSum=-4.004;QD=21.89;ReadPosRankSum=0.446;VQSLOD=2.9313;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:34:14.12:759,14,0	0/0:14,0:14:24.52:0,25,622	0/0:34,0:11:22.80:0,23,322	0/0:36,0:8:17.40:0,17,232	0/0:26,0:25:46.56:0,47,1397	0/0:27,0:27:70.94:0,71,1592	0/0:27,0:26:62.24:0,62,1595	0/0:21,0:21:59.04:0,59,1105	0/0:23,0:22:56.21:0,56,1501	0/0:25,0:25:72.67:0,73,1694	0/0:13,0:13:36.12:0,36,970	0/0:30,0:28:68.97:0,69,1601	0/0:23,0:23:38.52:0,39,1202	0/0:25,0:24:46.16:0,46,1259	0/0:31,0:29:74.64:0,75,1765	1/1:1,23:26:15.05:342,15,0	0/0:29,0:28:72.25:0,72,1906	1/1:14,0:14:14.71:515,15,0	1/1:1,1:12:17.74:461,18,0	1/1:0,13:13:8.96:226,9,0	1/1:5,0:19:9.03:153,9,0	0/0:19,0:19:29:0,29,947	0/0:19,0:19:45.12:0,45,1104	0/0:43,0:41:99:0,102,2754	0/0:22,0:21:54.03:0,54,1382	1/1:0,1:22:54.65:850,55,0	1/1:3,13:20:19.88:328,20,0	0/0:3,0:3:9.03:0,9,258
chr10	97613712	.	TAC	T	769.37	PASS	AB=0.942;AC=26;AF=0.500;AN=52;BaseQRankSum=5.914;DP=670;FS=2.739;HRun=0;HaplotypeScore=108.7615;InbreedingCoeff=-0.2013;MQ=56.34;MQ0=28;MQRankSum=-0.909;QD=1.57;ReadPosRankSum=0.036;VQSLOD=1.4243;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:37:9.18:0,9,117	0/1:9,3:12:17.41:17,0,83	./.	./.	0/1:23,1:23:63.67:115,0,64	0/1:26,0:25:55.36:55,0,102	0/1:27,0:26:34.33:34,0,135	0/0:22,0:22:2.22:0,2,8	0/0:25,0:23:11.59:0,12,454	0/1:24,0:24:16.57:17,0,124	0/0:14,0:14:11.83:0,12,139	0/1:27,2:27:53.50:54,0,380	0/1:23,0:24:46.98:47,0,245	0/1:19,8:26:24.58:25,0,218	0/1:30,0:28:64.25:64,0,256	1/1:26,0:26:14.26:80,14,0	0/1:25,6:28:37.05:37,0,273	0/0:18,0:18:17.98:0,18,189	1/1:18,0:18:2.92:17,3,0	1/1:14,0:14:8.81:54,9,0	1/1:23,2:21:6.02:64,6,0	0/1:19,0:20:35.29:35,0,157	0/1:21,0:21:18.58:19,0,168	0/1:42,1:42:19.91:20,0,617	0/1:23,0:22:69.77:70,0,232	1/1:23,0:22:11.55:70,12,0	1/1:20,0:18:5.18:38,5,0	0/0:3,0:3:9.03:0,9,110
chr10	97614179	.	G	GGT	9587.35	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=7.215;DP=745;FS=3.135;HRun=0;HaplotypeScore=104.1246;InbreedingCoeff=0.9863;MQ=72.67;MQ0=1;MQRankSum=-1.858;QD=36.45;ReadPosRankSum=2.505;VQSLOD=7.1616;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,43:51:99:1911,117,0	0/0:6,0:6:15.05:0,15,189	0/0:28,0:22:43.37:0,43,512	0/0:24,0:23:36.85:0,37,447	0/0:18,0:18:54.17:0,54,671	0/0:34,0:35:99:0,99,1197	0/0:34,0:34:72.21:0,72,893	0/0:28,0:28:69.19:0,69,838	0/0:27,0:27:72.23:0,72,909	0/0:27,0:27:63.20:0,63,793	0/0:12,0:12:27.09:0,27,340	0/0:35,0:36:90.10:0,90,1096	0/0:20,0:20:48.11:0,48,576	0/0:29,0:30:87.11:0,87,1074	0/0:21,0:20:54.15:0,54,655	1/1:12,22:34:28.40:1010,28,0	0/0:35,0:35:99:0,99,1248	1/1:1,17:18:39.13:648,39,0	1/1:8,11:19:36.05:561,36,0	1/1:6,18:24:19.33:856,19,0	1/1:8,55:63:99:2344,141,0	0/0:28,0:28:69.21:0,69,857	0/0:16,0:16:36.11:0,36,454	0/0:28,0:28:84.22:0,84,1016	0/0:20,0:20:42.13:0,42,530	1/1:3,27:30:84.27:1360,84,0	1/1:3,21:23:54.18:897,54,0	0/0:8,0:8:9.03:0,9,114
chr10	97614562	.	AT	A	8167.63	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=18.481;DP=743;FS=5.408;HRun=2;HaplotypeScore=92.1184;InbreedingCoeff=0.9558;MQ=86.48;MQ0=0;MQRankSum=-3.296;QD=36.14;ReadPosRankSum=4.196;VQSLOD=5.2709;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,46:47:99:1753,135,0	0/0:6,0:6:18.06:0,18,270	0/0:30,0:30:84.75:0,85,1236	0/0:25,0:26:70.08:0,70,972	0/0:22,0:22:63.21:0,63,942	0/0:16,0:16:48.15:0,48,700	0/0:46,0:46:99:0,138,1975	0/0:33,0:33:96.32:0,96,1421	0/0:33,0:33:96.33:0,96,1438	0/0:27,0:27:75.24:0,75,1088	0/0:22,0:22:57.19:0,57,854	0/0:31,0:31:90.30:0,90,1348	0/0:22,0:22:66.19:0,66,948	0/0:36,0:36:99:0,108,1599	0/0:35,0:35:99:0,105,1516	1/1:0,28:28:78.25:1013,78,0	0/0:37,0:37:99:0,106,1611	1/1:0,26:26:72.23:935,72,0	1/1:1,15:16:45.15:584,45,0	1/1:1,18:19:53.85:701,54,0	1/1:0,31:31:90.29:1169,90,0	0/0:16,0:16:48.16:0,48,717	0/0:16,0:16:48.16:0,48,719	0/0:35,0:35:99:0,105,1569	0/0:13,0:13:36.12:0,36,540	1/1:2,28:30:0.34:1001,0,0	1/1:1,28:29:78.25:1013,78,0	0/0:15,0:15:45.15:0,45,674
chr10	97617161	.	T	TACATCCC	19055.29	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-8.132;DP=680;FS=0.673;HRun=0;HaplotypeScore=141.1705;InbreedingCoeff=0.9979;MQ=86.28;MQ0=0;MQRankSum=-18.272;QD=97.22;ReadPosRankSum=-0.194;VQSLOD=5.5535;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,15:30:69.19:2595,69,0	0/0:8,0:8:21.07:0,21,566	0/0:27,0:27:72.25:0,72,1833	0/0:24,0:24:59.63:0,60,1398	0/0:33,0:33:99:0,99,2574	0/0:28,0:28:78.27:0,78,2016	0/0:20,0:20:60.21:0,60,1536	0/0:36,0:36:99:0,102,2625	0/0:20,0:20:60.21:0,60,1608	0/0:24,0:24:54.19:0,54,1395	0/0:25,0:25:75.26:0,75,1949	0/0:24,0:24:72.25:0,72,1933	0/0:28,0:28:84.27:0,84,2111	0/0:26,0:26:78.25:0,78,2044	0/0:29,0:28:84.29:0,84,2256	1/1:5,15:21:57.20:2208,57,0	0/0:22,0:22:63.20:0,63,1643	1/1:5,6:12:33.11:1320,33,0	1/1:14,5:22:57.20:1964,57,0	1/1:11,26:39:90.31:3551,90,0	1/1:4,7:14:30.10:1222,30,0	0/0:30,0:30:90.31:0,90,2380	0/0:22,0:22:63.21:0,63,1645	0/0:13,0:13:36.12:0,36,938	0/0:24,0:24:72.25:0,72,1905	1/1:9,24:35:18.44:3704,18,0	1/1:7,16:23:63.22:2491,63,0	0/0:21,0:21:63.22:0,63,1699
chr10	97617973	.	T	TA	633.60	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.341;DP=619;FS=1.641;HRun=8;HaplotypeScore=55.3592;InbreedingCoeff=0.9604;MQ=77.03;MQ0=0;MQRankSum=-1.456;QD=22.63;ReadPosRankSum=-0.058;VQSLOD=3.8118;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:80.90:0,81,729	0/0:8,0:8:24.01:0,24,220	0/0:22,0:22:16.75:0,17,323	0/0:8,0:8:21.01:0,21,192	0/0:21,0:21:57.03:0,57,521	0/0:26,1:27:34.41:0,34,569	0/0:19,0:19:45:0,45,412	0/0:27,0:27:69.02:0,69,628	0/0:23,0:23:69.04:0,69,631	0/0:34,0:34:96.05:0,96,877	0/0:18,0:18:48.02:0,48,439	0/0:25,0:25:57.01:0,57,522	0/0:24,0:24:66.03:0,66,604	0/0:22,0:22:63.03:0,63,576	0/0:23,0:23:63.02:0,63,577	0/0:26,0:26:69.03:0,69,631	0/0:38,0:38:99:0,108,988	1/1:5,23:28:42.40:728,42,0	0/0:20,0:20:42.01:0,42,384	0/0:35,0:35:87.03:0,87,792	0/0:21,0:21:60.02:0,60,545	0/0:18,0:18:51.01:0,51,462	0/0:17,1:18:13.41:0,13,377	0/0:16,0:16:48.03:0,48,439	0/0:15,0:15:45.02:0,45,412	0/0:12,0:12:33:0,33,296	0/0:31,0:31:90.05:0,90,824	0/0:9,0:9:27.01:0,27,247
chr10	97618375	.	TA	T	372.41	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.555;DP=621;FS=0.000;HRun=2;HaplotypeScore=56.7130;InbreedingCoeff=0.9997;MQ=86.86;MQ0=0;MQRankSum=-2.631;QD=28.65;ReadPosRankSum=-0.441;VQSLOD=2.9368;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.22:0,69,1009	0/0:15,0:15:45.14:0,45,654	0/0:27,0:27:78.17:0,78,1101	0/0:15,0:15:42.11:0,42,593	0/0:29,0:29:87.29:0,87,1301	0/0:25,0:25:75.24:0,75,1104	0/0:21,0:21:63.21:0,63,944	0/0:33,0:33:99:0,99,1414	0/0:15,0:15:45.14:0,45,654	0/0:27,0:27:81.24:0,81,1185	0/0:28,0:28:81.27:0,81,1188	0/0:15,0:15:45.15:0,45,673	0/0:24,0:24:72.23:0,72,1046	0/0:13,0:13:39.13:0,39,584	0/0:19,0:18:57.19:0,57,854	0/0:21,0:21:63.20:0,63,925	0/0:15,0:15:45.13:0,45,637	1/1:0,13:13:36.12:467,36,0	0/0:19,0:19:57.19:0,57,854	0/0:30,0:30:87.29:0,87,1304	0/0:17,0:17:51.17:0,51,764	0/0:21,0:21:63.20:0,63,921	0/0:32,0:32:90.25:0,90,1255	0/0:19,0:19:57.18:0,57,834	0/0:20,0:20:60.20:0,60,899	0/0:39,0:39:99:0,117,1727	0/0:27,0:27:78.26:0,78,1150	0/0:18,0:18:54.18:0,54,809
chr10	97622288	.	GGT	G	405.22	PASS	AB=0.952;AC=20;AF=0.400;AN=50;BaseQRankSum=0.981;DP=728;FS=0.792;HRun=0;HaplotypeScore=90.3835;InbreedingCoeff=0.2717;MQ=68.34;MQ0=4;MQRankSum=0.186;QD=1.19;ReadPosRankSum=0.329;VQSLOD=1.7012;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:56:26.93:0,27,215	0/0:12,0:12:9.02:0,9,114	./.	./.	0/0:15,0:15:15.03:0,15,202	0/0:16,0:16:11.75:0,12,81	0/0:34,0:35:30.41:0,30,374	0/0:31,0:29:7.69:0,8,42	0/0:25,0:25:18.06:0,18,265	0/1:24,0:25:12.36:12,0,79	0/1:19,0:19:10.75:11,0,38	0/0:31,1:33:14.99:0,15,199	0/1:26,2:28:5.62:6,0,245	0/1:20,2:23:7.71:8,0,363	0/1:23,1:29:14.62:15,0,109	./.	0/1:25,4:29:64.76:65,0,290	1/1:13,0:16:5.68:28,6,0	1/1:11,0:11:6.01:58,6,0	1/1:17,1:19:8.82:61,9,0	1/1:52,9:61:6.01:65,6,0	0/0:18,0:19:17.87:0,18,160	0/0:20,0:20:21.06:0,21,291	0/0:26,1:56:12.37:0,12,343	0/1:18,1:19:17.82:18,0,108	1/1:23,1:24:10.54:112,11,0	1/1:21,1:24:11.03:110,11,0	0/1:11,0:12:4.09:4,0,156
chr10	97623560	.	GGGAGAAGA	G	132.42	PASS	AB=0.988;AC=8;AF=0.167;AN=48;BaseQRankSum=3.302;DP=256;FS=1.229;HRun=0;HaplotypeScore=62.1648;InbreedingCoeff=0.4113;MQ=72.67;MQ0=8;MQRankSum=-1.728;QD=2.07;ReadPosRankSum=-1.970;VQSLOD=1.1061;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:24.12:0,24,1149	0/0:1,0:1:3.01:0,3,131	0/1:38,0:18:13.19:13,0,797	0/0:47,0:18:31.84:0,32,700	0/0:4,0:4:6.02:0,6,204	0/0:5,0:5:12.03:0,12,370	0/1:19,0:20:59.66:60,0,1113	0/0:15,0:15:44.82:0,45,1340	0/0:5,0:5:12.03:0,12,255	0/0:12,0:12:30.10:0,30,945	0/0:8,0:8:24.08:0,24,878	0/0:10,0:10:30.10:0,30,992	0/0:7,0:7:12.04:0,12,381	0/0:11,0:11:30.10:0,30,1096	0/0:8,0:8:21.07:0,21,725	./.	0/0:11,0:10:30.09:0,30,998	1/1:2,0:2:5.98:81,6,0	./.	./.	./.	0/0:2,0:2:5.95:0,6,125	0/0:4,0:4:12.04:0,12,469	0/0:4,0:4:9.03:0,9,342	0/0:7,0:7:21.07:0,21,681	1/1:1,0:1:3.01:62,3,0	1/1:2,0:2:3.01:38,3,0	0/0:3,0:3:9.03:0,9,314
chr10	97624452	.	TCCCTCCCC	T	1215.30	PASS	AB=1.000;AC=6;AF=0.111;AN=54;BaseQRankSum=4.732;DP=356;FS=0.709;HRun=0;HaplotypeScore=96.8258;InbreedingCoeff=0.3210;MQ=75.13;MQ0=4;MQRankSum=-5.538;QD=14.47;ReadPosRankSum=-0.325;VQSLOD=1.9409;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:24.01:0,24,353	0/0:4,0:4:12.04:0,12,417	0/0:38,0:22:57.11:0,57,1036	0/0:27,0:17:44.80:0,45,1174	0/0:9,0:9:23.99:0,24,576	0/0:5,0:5:12.01:0,12,357	0/0:16,0:16:39.07:0,39,1016	0/0:20,0:20:48.10:0,48,872	0/0:12,0:12:29.49:0,29,973	0/0:8,0:8:15.05:0,15,392	0/0:9,0:9:18.04:0,18,444	0/0:16,0:16:44.77:0,45,942	0/0:14,0:14:30.02:0,30,885	0/0:11,0:11:20.82:0,21,398	0/0:11,0:11:24.53:0,25,635	./.	0/0:8,0:8:17.09:0,17,499	1/1:3,13:16:30.08:773,30,0	0/1:17,0:17:50.15:50,0,104	0/1:13,0:13:31.75:78,0,32	0/0:10,0:10:0.81:0,1,4	0/0:3,0:3:6.48:0,6,137	0/0:8,0:8:18.44:0,18,307	0/0:9,0:9:21.07:0,21,702	0/0:10,0:10:27.07:0,27,821	0/1:16,0:16:2.07:116,0,2	0/1:22,0:22:94.59:326,0,95	0/0:11,0:11:30.10:0,30,884
chr10	97624453	.	CCCT	C	1352.34	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=3.043;DP=347;FS=12.100;HRun=0;HaplotypeScore=64.1072;InbreedingCoeff=0.8810;MQ=75.31;MQ0=4;MQRankSum=-5.395;QD=15.91;ReadPosRankSum=-1.507;VQSLOD=1.8756;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:19.86:0,20,123	0/0:4,0:4:12.02:0,12,158	0/0:38,0:22:55.47:0,55,607	0/0:29,0:18:19.68:0,20,517	0/0:8,0:8:23.99:0,24,273	0/0:5,0:5:12.01:0,12,169	0/0:16,0:16:38.14:0,38,445	0/0:19,0:19:48.02:0,48,454	0/0:14,0:14:29.19:0,29,415	0/0:7,0:7:15:0,15,167	0/0:9,0:9:17.84:0,18,182	0/0:17,0:17:40.83:0,41,356	0/0:14,0:14:30.01:0,30,401	0/0:11,0:11:20.61:0,21,208	0/0:11,0:11:23.99:0,24,255	./.	0/0:7,0:7:2.62:0,3,168	1/1:15,0:15:30.06:315,30,0	1/1:15,1:16:7.42:200,7,0	1/1:10,0:10:20.94:167,21,0	1/1:2,6:8:5.88:51,6,0	0/0:3,0:3:6.48:0,6,73	0/0:8,0:8:18.40:0,18,162	0/0:9,0:9:21.01:0,21,286	0/0:10,0:10:27.01:0,27,328	1/1:15,0:15:26.80:211,27,0	1/1:21,0:21:57.03:584,57,0	0/0:11,0:11:29.73:0,30,327
chr10	97624455	.	CT	C	1188.10	PASS	AB=0.875;AC=13;AF=0.241;AN=54;BaseQRankSum=4.009;DP=338;FS=4.161;HRun=1;HaplotypeScore=56.1192;InbreedingCoeff=0.8000;MQ=76.53;MQ0=4;MQRankSum=-4.355;QD=14.14;ReadPosRankSum=-0.843;VQSLOD=2.6335;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:21.33:0,21,130	0/0:4,0:4:11.73:0,12,85	0/0:38,0:22:50.93:0,51,457	0/0:30,1:18:28.19:0,28,374	0/0:9,0:9:23.91:0,24,186	0/0:4,0:4:11.98:0,12,107	0/0:16,0:16:19.75:0,20,281	0/0:18,0:18:39.81:0,40,369	0/0:14,0:14:25.78:0,26,216	0/0:7,0:7:14.98:0,15,137	0/0:8,0:8:17.81:0,18,137	0/0:16,1:17:10.40:0,10,213	0/0:14,0:14:29.14:0,29,222	0/0:11,0:11:19.33:0,19,136	0/0:10,0:10:23.46:0,23,189	./.	0/1:6,1:7:34.55:35,0,75	1/1:14,0:14:29.77:214,30,0	1/1:12,2:14:22.91:197,23,0	1/1:9,0:9:22.49:171,22,0	1/1:7,0:7:5.84:34,6,0	0/0:4,0:4:6.41:0,6,51	0/0:7,1:8:18.38:0,18,139	0/0:9,0:9:20.45:0,20,161	0/0:8,2:10:9.56:0,10,179	1/1:12,0:12:26.79:200,27,0	1/1:18,3:21:59.96:519,60,0	0/0:10,1:11:5.80:0,6,156
chr10	97624556	.	A	AT	459.08	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.527;DP=505;FS=0.000;HRun=8;HaplotypeScore=49.5202;InbreedingCoeff=0.8410;MQ=74.54;MQ0=0;MQRankSum=-2.489;QD=27.00;ReadPosRankSum=-0.637;VQSLOD=3.8237;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:48.14:554,48,0	0/0:9,0:9:23.99:0,24,215	0/0:13,0:13:29.97:0,30,267	0/0:8,0:8:17.15:0,17,134	0/0:32,0:31:84.02:0,84,764	0/0:23,0:23:63.01:0,63,571	0/0:16,0:16:48.03:0,48,439	0/0:26,0:25:63.03:0,63,577	0/0:19,0:19:54.02:0,54,494	0/0:29,0:29:81.03:0,81,739	0/0:17,0:17:48.02:0,48,439	0/0:23,0:23:66.03:0,66,604	0/0:19,0:20:54.03:0,54,494	0/0:15,0:15:36:0,36,325	0/0:24,0:24:63.03:0,63,576	0/0:1,0:1:3:0,3,27	0/0:13,0:13:36.01:0,36,329	0/0:27,0:27:65.99:0,66,597	0/0:16,0:16:36:0,36,330	0/0:11,0:11:33.02:0,33,302	0/0:10,0:10:30.02:0,30,275	0/0:19,0:19:51:0,51,462	0/0:19,0:19:45.01:0,45,412	0/0:16,0:16:42.02:0,42,384	0/0:16,0:16:41.99:0,42,379	0/0:22,0:22:57.01:0,57,518	0/0:25,0:25:69.04:0,69,631	0/0:19,0:19:57.03:0,57,522
chr10	97624803	.	A	AT	5479.30	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=-4.175;DP=619;FS=0.714;HRun=6;HaplotypeScore=61.9847;InbreedingCoeff=0.9998;MQ=83.26;MQ0=0;MQRankSum=-2.606;QD=33.01;ReadPosRankSum=2.782;VQSLOD=4.9806;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:63.14:0,63,642	0/0:12,0:12:33.06:0,33,330	0/0:20,0:20:42.07:0,42,416	0/0:17,0:17:39.07:0,39,391	0/0:26,0:26:63.14:0,63,643	0/0:16,0:17:50.13:0,50,489	0/0:22,0:22:60.13:0,60,612	0/0:34,0:34:90.17:0,90,899	0/0:12,0:12:30.05:0,30,299	0/0:34,0:34:96.22:0,96,980	0/0:19,0:19:48.08:0,48,481	0/0:16,0:16:45.10:0,45,459	0/0:27,0:27:78.18:0,78,796	0/0:20,0:20:60.10:0,60,601	0/0:16,0:16:48.11:0,48,490	./.	0/0:29,0:29:84.15:0,84,842	1/1:2,26:28:75.24:943,75,0	1/1:4,23:27:75.13:907,75,0	1/1:3,33:36:99:1244,102,0	1/1:1,16:17:42.13:528,42,0	0/0:20,0:20:54.12:0,54,551	0/0:24,0:24:66.15:0,66,673	0/0:17,0:17:48.11:0,48,489	0/0:25,0:25:75.17:0,75,765	1/1:1,23:24:41.61:837,42,0	1/1:2,32:34:81.26:1019,81,0	0/0:25,0:25:72.15:0,72,727
chr10	97625160	.	C	CAA	5147.59	PASS	AB=0.585;AC=13;AF=0.241;AN=54;BaseQRankSum=2.050;DP=697;FS=6.549;HRun=9;HaplotypeScore=96.1546;InbreedingCoeff=0.9039;MQ=74.74;MQ0=0;MQRankSum=-0.002;QD=26.95;ReadPosRankSum=-1.547;VQSLOD=4.3631;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:28:54.90:188,55,0	0/0:18,0:18:54.10:0,54,558	0/0:19,0:18:39.33:0,39,388	0/0:20,0:17:29.46:0,29,276	0/0:32,0:32:84.18:0,84,893	0/0:33,0:33:87.20:0,87,926	0/0:35,0:35:91.74:0,92,962	0/0:36,0:36:99:0,99,1039	0/0:27,0:27:69.12:0,69,718	0/0:25,0:25:40.94:0,41,640	0/0:18,0:18:45.09:0,45,479	0/0:34,0:36:81.09:0,81,897	0/0:33,0:33:84.18:0,84,884	0/0:32,0:34:80.87:0,81,916	0/0:38,0:38:90.16:0,90,958	./.	0/0:18,0:18:51.11:0,51,542	1/1:2,0:23:49.91:171,50,0	1/1:3,18:25:68.15:887,68,0	1/1:7,29:37:87.15:1230,87,0	1/1:4,15:19:45.15:692,45,0	0/0:16,0:16:36.08:0,36,383	0/0:18,0:18:45.10:0,45,479	0/0:19,0:19:54.13:0,54,575	0/0:17,0:17:42.07:0,42,447	0/1:7,15:24:12.69:642,0,13	1/1:3,32:34:87.30:1338,87,0	0/0:14,0:14:39.07:0,39,405
chr10	97625668	.	AC	A	966.84	PASS	AB=0.741;AC=5;AF=0.093;AN=54;BaseQRankSum=8.741;DP=675;FS=5.315;HRun=1;HaplotypeScore=73.3186;InbreedingCoeff=-0.1021;MQ=77.08;MQ0=0;MQRankSum=-8.826;QD=7.67;ReadPosRankSum=-0.784;VQSLOD=0.5380;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1632	0/0:11,0:11:33.11:0,33,522	0/0:16,0:15:41.14:0,41,578	0/0:33,1:33:99:0,99,1498	0/0:18,0:18:50.90:0,51,791	0/0:25,0:25:75.26:0,75,1195	0/0:28,0:28:84.25:0,84,1301	0/0:32,0:32:96.32:0,96,1508	0/0:27,0:27:81.28:0,81,1292	0/0:20,0:20:57.19:0,57,908	0/0:20,0:20:57.19:0,57,910	0/0:36,0:36:99:0,108,1721	0/0:28,0:28:81.23:0,81,1257	0/0:33,0:33:99:0,99,1554	0/0:28,0:28:84.29:0,84,1335	./.	0/0:39,0:39:99:0,117,1860	0/0:27,0:27:81.28:0,81,1285	0/1:6,4:10:99:119,0,180	0/1:26,10:36:99:235,0,564	0/1:6,8:14:99:214,0,143	0/0:13,0:13:39.13:0,39,623	0/0:15,0:15:45.14:0,45,693	0/0:31,0:31:93.27:0,93,1457	0/0:19,0:19:57.19:0,57,910	0/1:34,6:40:99:134,0,1216	0/1:15,11:26:99:381,0,325	0/0:14,0:14:42.14:0,42,668
chr10	97626928	.	A	AGGGTGTGTGTGTGT	355.34	PASS	AB=0.991;AC=7;AF=0.130;AN=54;BaseQRankSum=3.839;DP=548;FS=9.577;HRun=0;HaplotypeScore=201.7775;InbreedingCoeff=0.1261;MQ=65.50;MQ0=16;MQRankSum=-3.582;QD=2.65;ReadPosRankSum=-4.052;VQSLOD=0.5271;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,18:32:5.98:170,6,0	0/0:6,0:6:18.05:0,18,641	0/0:42,0:20:49.43:0,49,859	0/0:36,0:22:45.88:0,46,787	0/0:17,0:17:35.44:0,35,735	0/0:22,0:22:60.12:0,60,1839	0/0:19,0:19:44.76:0,45,1317	0/0:36,0:35:96.02:0,96,1371	0/0:9,0:9:23.98:0,24,708	0/0:19,0:19:5.42:0,5,1092	0/0:19,0:19:54.03:0,54,1322	0/0:23,0:23:63.15:0,63,2185	0/0:13,0:13:32.98:0,33,927	0/0:13,0:13:36.08:0,36,1097	0/0:18,0:18:48.10:0,48,1504	./.	0/0:24,0:24:66.13:0,66,1906	0/0:15,0:16:45:0,45,1056	0/1:12,0:12:25.13:25,0,108	0/0:11,0:20:19.52:0,20,174	0/1:20,0:19:13.45:13,0,197	0/0:21,0:20:51.14:0,51,1974	0/0:11,0:11:29.99:0,30,725	0/0:18,0:17:42.57:0,43,1419	0/1:19,0:19:55.81:56,0,1414	0/1:28,0:25:99:209,0,264	0/1:22,0:22:4.89:5,0,281	0/0:10,0:10:19.58:0,20,662
chr10	97628952	.	T	TG	7063.41	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-8.461;DP=706;FS=13.824;HRun=3;HaplotypeScore=66.7324;InbreedingCoeff=0.9649;MQ=88.21;MQ0=0;MQRankSum=-1.827;QD=36.79;ReadPosRankSum=1.948;VQSLOD=4.2344;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,49:52:99:1927,138,0	0/0:8,0:8:24.07:0,24,288	0/0:31,0:31:40.61:0,41,837	0/0:18,0:18:51.16:0,51,611	0/0:32,0:32:90.28:0,90,1080	0/0:12,0:12:36.11:0,36,432	0/0:27,0:27:78.24:0,78,936	0/0:31,0:31:90.24:0,90,1042	0/0:29,0:29:84.25:0,84,997	0/0:29,0:29:81.23:0,81,959	0/0:18,0:18:51.16:0,51,612	0/0:27,0:27:78.23:0,78,924	0/0:24,0:24:72.22:0,72,863	0/0:24,0:24:72.21:0,72,852	0/0:28,0:28:78.21:0,78,912	0/0:1,0:1:3.01:0,3,36	0/0:32,0:32:93.28:0,93,1116	0/0:17,0:17:51.16:0,51,612	1/1:1,17:18:51.14:680,51,0	1/1:0,30:30:87.25:1196,87,0	1/1:1,34:35:93.31:1302,93,0	0/0:26,0:26:75.22:0,75,889	0/0:18,0:18:51.16:0,51,612	0/0:42,0:42:99:0,123,1453	0/0:26,0:26:72.20:0,72,849	1/1:6,25:31:42.22:993,42,0	1/1:3,23:26:69.23:966,69,0	0/0:14,0:14:42.13:0,42,504
chr10	97629225	.	A	AC	7631.23	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=-10.545;DP=719;FS=4.956;HRun=0;HaplotypeScore=68.3314;InbreedingCoeff=1.0000;MQ=85.32;MQ0=0;MQRankSum=-1.111;QD=42.40;ReadPosRankSum=0.982;VQSLOD=5.5309;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:40:96.33:1531,96,0	0/0:12,0:12:36.09:0,36,483	0/0:26,0:26:78.24:0,78,1033	0/0:19,0:19:57.15:0,57,743	0/0:22,0:22:66.22:0,66,912	0/0:16,0:16:48.14:0,48,653	0/0:28,0:28:81.24:0,81,1095	0/0:36,0:36:99:0,102,1369	0/0:35,0:35:99:0,102,1391	0/0:23,0:23:69.23:0,69,952	0/0:22,0:22:66.22:0,66,922	0/0:37,0:37:99:0,105,1402	0/0:36,0:36:99:0,108,1474	0/0:31,0:31:93.31:0,93,1299	0/0:34,0:34:99:0,102,1394	./.	0/0:33,0:33:99:0,99,1285	1/1:1,25:26:66.23:1054,66,0	1/1:0,14:14:39.11:588,39,0	1/1:1,26:27:75.25:1169,75,0	1/1:0,25:25:72.25:1147,72,0	0/0:22,0:22:66.21:0,66,901	0/0:20,0:20:60.20:0,60,838	0/0:33,0:33:99:0,99,1384	0/0:35,0:35:99:0,102,1422	1/1:0,24:24:66.22:1046,66,0	1/1:1,23:24:69.24:1096,69,0	0/0:19,0:19:54.18:0,54,754
chr10	97629346	.	C	CTTCA	3803.54	PASS	AB=0.804;AC=7;AF=0.140;AN=50;BaseQRankSum=-7.190;DP=722;FS=0.515;HRun=0;HaplotypeScore=116.2300;InbreedingCoeff=0.4856;MQ=66.96;MQ0=4;MQRankSum=-0.219;QD=23.77;ReadPosRankSum=-0.862;VQSLOD=3.3605;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:11.12:11,0,19	0/0:9,0:9:21.07:0,21,318	./.	./.	0/0:28,0:28:42.11:0,42,604	0/0:27,0:27:33.11:0,33,510	0/0:21,0:21:33.08:0,33,465	0/0:46,0:46:6.02:0,6,87	0/0:33,0:33:57.19:0,57,869	0/0:42,0:42:78.25:0,78,1179	0/0:29,0:29:57.19:0,57,874	0/0:27,0:27:57.19:0,57,881	1/1:7,23:32:54.19:1267,54,0	0/0:33,0:33:57.18:0,57,845	0/0:31,0:31:66.21:0,66,996	./.	0/0:21,0:21:42.14:0,42,649	0/1:13,17:32:47.61:868,0,48	0/0:19,0:17:15.05:0,15,232	0/0:28,0:27:51.14:0,51,751	0/0:11,0:11:27.09:0,27,417	1/1:12,19:33:56.62:1147,57,0	0/0:28,0:28:35.40:0,35,555	0/0:18,0:18:21.07:0,21,325	0/1:32,11:44:99:509,0,389	0/0:33,0:33:54.18:0,54,820	0/0:30,0:29:54.15:0,54,791	0/0:19,0:18:27.09:0,27,417
chr10	97629451	.	A	AAT	7832.80	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.804;DP=695;FS=4.031;HRun=0;HaplotypeScore=86.5828;InbreedingCoeff=0.9649;MQ=93.27;MQ0=1;MQRankSum=-2.099;QD=48.65;ReadPosRankSum=2.313;VQSLOD=6.1273;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:22:60.20:1061,60,0	0/0:9,0:9:24.05:0,24,331	0/0:32,0:32:86.99:0,87,1195	0/0:28,0:28:81.21:0,81,1134	0/0:24,0:24:69.21:0,69,977	0/0:29,0:29:81.27:0,81,1192	0/0:26,0:26:78.23:0,78,1106	0/0:43,0:43:99:0,117,1723	0/0:25,0:25:72.24:0,72,1060	0/0:33,0:33:99:0,99,1442	0/0:18,0:18:51.17:0,51,751	0/0:26,0:26:78.25:0,78,1130	0/0:24,0:24:72.23:0,72,1038	0/0:29,0:29:84.28:0,84,1235	0/0:35,0:35:99:0,102,1483	0/0:1,0:1:3.01:0,3,44	0/0:41,0:41:99:0,120,1756	0/0:18,0:18:54.18:0,54,794	1/1:0,22:22:66.23:1205,66,0	1/1:0,30:29:84.29:1537,84,0	1/1:0,23:24:57.20:1068,57,0	0/0:33,0:33:96.32:0,96,1394	0/0:16,0:16:48.14:0,48,686	0/0:15,0:15:42.14:0,42,618	0/0:16,0:16:48.15:0,48,688	1/1:3,32:35:58.16:1781,58,0	1/1:1,27:28:63.22:1180,63,0	0/0:13,0:13:39.13:0,39,573
chr10	97629635	.	A	AT	1050.13	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=3.224;DP=632;FS=4.633;HRun=5;HaplotypeScore=74.8397;InbreedingCoeff=0.9912;MQ=83.62;MQ0=0;MQRankSum=-3.551;QD=29.17;ReadPosRankSum=2.314;VQSLOD=4.3615;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,31:36:87.28:1145,87,0	0/0:9,0:9:18.02:0,18,185	0/0:20,0:20:53.69:0,54,542	0/0:17,0:17:35.99:0,36,354	0/0:21,0:21:54.13:0,54,580	0/0:19,0:19:54.12:0,54,572	0/0:27,0:27:72.16:0,72,766	0/0:27,0:27:69.15:0,69,727	0/0:18,0:18:51.11:0,51,539	0/0:30,0:30:75.18:0,75,805	0/0:23,0:23:63.10:0,63,671	0/0:26,0:26:69.15:0,69,733	0/0:14,0:14:36.09:0,36,387	0/0:36,0:36:99:0,105,1120	0/0:23,0:23:63.13:0,63,663	./.	0/0:27,0:27:75.19:0,75,806	0/0:19,0:19:48.10:0,48,507	0/0:15,0:15:42.09:0,42,439	0/0:27,0:27:75.18:0,75,806	0/0:22,0:22:54.11:0,54,570	0/0:26,0:26:75.19:0,75,803	0/0:21,0:21:60.15:0,60,645	0/0:39,0:39:99:0,102,1096	0/0:27,0:27:78.20:0,78,838	0/0:31,0:30:90.23:0,90,967	0/0:21,0:21:54.13:0,54,580	0/0:11,0:11:30.08:0,30,322
chr10	97629937	.	C	CA	4888	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=-9.478;DP=617;FS=0.772;HRun=2;HaplotypeScore=58.3779;InbreedingCoeff=0.9822;MQ=98.48;MQ0=0;MQRankSum=-4.143;QD=37.89;ReadPosRankSum=-0.566;VQSLOD=5.0489;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1289	0/0:5,0:5:15.03:0,15,164	0/0:38,0:38:95.39:0,95,1160	0/0:31,0:31:69.89:0,70,943	0/0:21,0:21:63.17:0,63,747	0/0:30,0:30:84.25:0,84,1028	0/0:28,0:28:84.23:0,84,1006	0/0:33,0:33:93.28:0,93,1132	0/0:24,0:24:72.22:0,72,880	0/0:16,0:16:42.13:0,42,517	0/0:10,0:10:30.05:0,30,354	0/0:19,0:19:57.16:0,57,682	0/0:21,0:21:60.16:0,60,716	0/0:30,0:30:81.23:0,81,978	0/0:22,0:22:63.20:0,63,780	./.	0/0:30,0:30:90.27:0,90,1104	0/0:29,0:29:84.18:0,84,997	1/1:1,25:26:72.19:980,72,0	1/1:0,18:18:54.10:725,54,0	1/1:0,25:25:60.20:863,60,0	0/0:10,0:10:27.07:0,27,322	0/0:11,0:11:27.06:0,27,310	0/0:27,0:27:72.23:0,72,892	0/0:13,0:13:39.11:0,39,471	1/1:0,25:25:75.21:1024,75,0	1/1:2,33:35:90.30:1295,90,0	0/0:3,0:3:9.03:0,9,112
chr10	97630214	.	GTGGGGGTGGGGT	G	328.87	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=4.193;DP=254;FS=13.164;HRun=0;HaplotypeScore=86.2822;InbreedingCoeff=0.6031;MQ=64.83;MQ0=4;MQRankSum=-2.926;QD=27.41;ReadPosRankSum=0.205;VQSLOD=1.5666;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,6:12:15.01:417,15,0	0/0:4,0:4:12.04:0,12,618	0/0:17,0:10:30.10:0,30,1514	0/0:16,0:9:14.32:0,14,815	0/0:11,0:11:30.10:0,30,1577	0/0:13,0:13:39.13:0,39,2177	0/0:15,0:15:45.15:0,45,2373	0/0:22,0:21:63.18:0,63,2750	0/0:6,0:6:18.06:0,18,1038	0/0:3,0:3:6.49:0,6,230	0/0:7,0:7:21.07:0,21,1275	0/0:3,0:3:9.02:0,9,292	0/0:6,0:6:18.06:0,18,1109	0/0:6,0:6:18.06:0,18,1062	0/0:11,0:11:27.09:0,27,1554	./.	0/0:23,0:24:49.18:0,49,3415	0/0:7,0:7:21.07:0,21,1052	0/0:11,0:11:33.11:0,33,1785	0/0:3,0:3:8.86:0,9,384	0/0:23,0:23:66.21:0,66,3611	0/0:3,0:3:6.02:0,6,371	0/0:2,0:2:6.02:0,6,371	0/0:7,0:7:21.07:0,21,993	0/0:4,0:4:12.04:0,12,742	0/0:5,0:5:15.05:0,15,926	0/0:9,0:9:27.04:0,27,1054	0/0:4,0:4:12.01:0,12,578
chr10	97630351	.	TA	T	1024.22	PASS	AB=0.833;AC=13;AF=0.241;AN=54;BaseQRankSum=6.261;DP=385;FS=9.082;HRun=11;HaplotypeScore=43.7775;InbreedingCoeff=0.8127;MQ=67.01;MQ0=44;MQRankSum=0.988;QD=12.05;ReadPosRankSum=1.005;VQSLOD=2.1520;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,1:17:20.75:0,21,422	0/0:8,0:5:9.02:0,9,94	0/0:29,0:7:19.60:0,20,125	0/0:25,0:11:14.52:0,15,88	0/0:15,0:14:27.07:0,27,288	0/0:13,0:12:32.75:0,33,330	0/0:12,0:11:27.07:0,27,288	0/0:21,2:19:7.85:0,8,489	0/0:5,0:5:15.04:0,15,160	0/0:13,0:12:33.07:0,33,345	0/0:11,0:10:24.03:0,24,242	0/0:16,0:16:32.96:0,33,328	0/0:13,0:10:21.04:0,21,216	0/0:9,0:9:27.07:0,27,287	0/0:11,0:10:24.06:0,24,256	./.	0/0:45,1:44:92.69:0,93,1188	1/1:4,14:16:35.96:296,36,0	1/1:6,15:21:23.06:305,23,0	1/1:2,6:7:16.23:126,16,0	1/1:0,7:7:14.98:123,15,0	0/0:1,0:1:3.01:0,3,32	0/0:5,0:5:9.02:0,9,96	0/1:4,1:4:15.62:16,0,55	0/0:14,0:13:33.08:0,33,352	1/1:8,11:15:29.92:243,30,0	1/1:3,4:7:11.99:99,12,0	0/0:11,0:9:18.03:0,18,184
chr10	97630457	.	TG	T	922.02	PASS	AB=0.963;AC=14;AF=0.259;AN=54;BaseQRankSum=3.285;DP=479;FS=0.000;HRun=11;HaplotypeScore=72.2899;InbreedingCoeff=0.5323;MQ=78.03;MQ0=2;MQRankSum=-0.526;QD=8.09;ReadPosRankSum=1.955;VQSLOD=2.3510;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:39:20.48:0,20,141	0/0:8,0:8:5.95:0,6,50	0/0:48,0:18:24.79:0,25,256	0/0:30,0:17:1.98:0,2,166	0/0:13,0:13:18.01:0,18,176	0/0:17,1:18:4.78:0,5,289	0/0:23,0:23:45.06:0,45,450	0/0:12,0:12:12.03:0,12,127	0/1:9,1:10:6.76:7,0,124	0/1:15,1:16:0.59:1,0,183	0/0:14,0:14:12.01:0,12,117	0/0:15,0:15:23.96:0,24,230	0/0:15,0:15:27:0,27,274	0/1:10,0:10:3.56:4,0,159	0/0:14,1:15:2.45:0,2,224	./.	0/0:33,0:33:30.39:0,30,487	0/0:30,0:30:29.01:0,29,550	1/1:6,10:16:41.75:324,42,0	1/1:5,3:9:11.02:80,11,0	1/1:5,11:16:5.79:197,6,0	0/0:8,0:8:9.02:0,9,96	0/1:9,0:9:9.60:10,0,97	0/0:19,1:20:17.44:0,17,374	0/0:7,0:7:6.02:0,6,64	1/1:2,9:11:23.97:197,24,0	1/1:6,11:16:32.94:268,33,0	0/0:16,0:16:27.03:0,27,270
chr10	97630876	.	TC	T	3891.40	PASS	AB=0.874;AC=26;AF=0.481;AN=54;BaseQRankSum=10.262;DP=493;FS=6.218;HRun=11;HaplotypeScore=74.8170;InbreedingCoeff=0.2125;MQ=77.96;MQ0=0;MQRankSum=0.311;QD=10.72;ReadPosRankSum=4.780;VQSLOD=3.0123;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,18:37:37.47:301,37,0	0/0:11,0:11:17.99:0,18,179	0/1:20,1:20:28.86:29,0,61	0/0:11,0:11:12.29:0,12,88	0/1:15,1:16:28.32:28,0,113	0/1:17,2:19:28.24:28,0,120	0/1:10,1:17:1.04:1,0,182	0/1:24,6:30:64.24:64,0,182	0/0:16,3:19:9.27:0,9,256	0/1:8,3:11:52.83:53,0,107	0/1:6,2:9:15.61:16,0,49	0/0:8,0:9:2.66:0,3,25	0/1:14,4:18:46.86:47,0,147	0/1:14,4:18:28.25:28,0,122	0/0:20,1:21:14.86:0,15,317	./.	0/0:23,2:25:32.41:0,32,493	1/1:1,26:27:74.91:615,75,0	1/1:3,19:22:53.80:438,54,0	1/1:1,18:19:53.94:443,54,0	1/1:0,11:11:32.96:271,33,0	1/1:9,1:10:2.93:25,3,0	0/1:9,1:11:12.62:13,0,84	0/0:18,1:19:14.33:0,14,284	0/0:4,0:4:5.85:0,6,46	1/1:4,31:35:98.81:809,99,0	1/1:1,31:32:83.86:683,84,0	0/0:11,0:11:30.01:0,30,287
chr10	97631450	.	TG	T	140.42	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=3.990;DP=553;FS=18.377;HRun=1;HaplotypeScore=89.4203;InbreedingCoeff=0.9305;MQ=75.98;MQ0=32;MQRankSum=-2.759;QD=17.55;ReadPosRankSum=-0.602;VQSLOD=2.5550;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:6:18.06:0,18,288	0/0:66,0:31:79.68:0,80,1066	0/0:68,0:28:50.36:0,50,767	0/0:17,0:17:21.01:0,21,335	0/0:28,0:26:23.69:0,24,362	0/0:6,0:5:15.05:0,15,240	0/0:24,0:24:66.23:0,66,1056	0/0:16,0:16:30.10:0,30,473	0/0:24,0:21:63.21:0,63,1007	0/0:19,0:19:41.82:0,42,659	0/0:17,0:15:32.96:0,33,502	0/0:20,0:18:42.14:0,42,659	0/0:14,0:14:12.04:0,12,191	0/0:11,0:11:24.08:0,24,383	./.	0/0:19,0:18:45.15:0,45,697	1/1:2,6:6:18.06:230,18,0	0/0:15,0:14:42.12:0,42,644	0/0:14,0:13:39.13:0,39,623	0/0:15,0:12:27.07:0,27,408	0/0:19,0:19:36.12:0,36,575	0/0:18,0:16:36.12:0,36,575	0/0:16,0:15:36.12:0,36,572	0/0:21,0:20:54.18:0,54,863	0/0:23,0:23:69.23:0,69,1068	0/0:28,0:27:51.17:0,51,791	0/0:14,0:13:36.12:0,36,575
chr10	97631453	.	CTGACT	C	233.99	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=5.016;DP=577;FS=9.214;HRun=0;HaplotypeScore=122.8797;InbreedingCoeff=0.9627;MQ=76.49;MQ0=31;MQRankSum=-1.953;QD=29.25;ReadPosRankSum=-0.628;VQSLOD=2.9565;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:6:18.06:0,18,549	0/0:69,0:34:85.16:0,85,2136	0/0:68,0:28:41.46:0,41,1244	0/0:17,0:17:20.79:0,21,633	0/0:30,0:28:23.59:0,24,643	0/0:8,0:7:21.07:0,21,549	0/0:25,0:25:75.26:0,75,2242	0/0:17,0:17:30.10:0,30,837	0/0:24,0:22:66.23:0,66,2051	0/0:20,0:20:45.15:0,45,1314	0/0:18,0:16:36.02:0,36,898	0/0:23,0:21:48.16:0,48,1276	0/0:15,0:15:18.06:0,18,423	0/0:13,0:13:24.08:0,24,739	./.	0/0:19,0:18:51.13:0,51,1341	1/1:4,4:6:18.03:324,18,0	0/0:16,0:15:45.15:0,45,1294	0/0:14,0:13:39.13:0,39,1191	0/0:16,0:14:33.11:0,33,904	0/0:20,0:20:42.14:0,42,1199	0/0:18,0:16:36.12:0,36,1085	0/0:16,0:15:39.13:0,39,1111	0/0:22,0:21:57.20:0,57,1728	0/0:24,0:24:72.20:0,72,2087	0/0:29,0:28:57.20:0,57,1485	0/0:15,0:14:39.13:0,39,1168
chr10	97632147	.	G	GAC	158.01	PASS	AB=0.838;AC=4;AF=0.077;AN=52;BaseQRankSum=5.028;DP=617;FS=10.153;HRun=0;HaplotypeScore=107.0026;InbreedingCoeff=-0.0924;MQ=44.24;MQ0=20;MQRankSum=-4.290;QD=2.14;ReadPosRankSum=0.675;VQSLOD=1.6446;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:6:18.05:0,18,254	./.	0/0:3,0:1:3:0,3,28	0/0:21,0:21:12.51:0,13,185	0/0:29,0:28:33.08:0,33,460	0/0:26,0:21:47.97:0,48,732	0/0:45,0:32:84.23:0,84,1229	0/0:21,0:21:41.87:0,42,639	0/1:26,3:27:91.84:92,0,990	0/0:15,0:13:14.68:0,15,229	0/0:26,0:26:48.11:0,48,684	0/0:26,0:26:60.11:0,60,892	0/0:21,0:19:20.99:0,21,321	0/0:23,0:23:33.57:0,34,485	0/1:11,6:14:26.17:59,0,26	0/0:32,0:31:65.70:0,66,959	0/1:4,2:6:37.46:105,0,37	0/0:24,0:18:50.76:0,51,733	0/0:22,2:23:2.37:0,2,775	0/0:33,0:30:72.17:0,72,1028	0/0:16,1:17:26.97:0,27,404	0/1:21,1:22:2.67:3,0,424	0/0:46,2:48:93.22:0,93,1329	0/0:14,0:14:24.08:0,24,366	0/0:33,1:32:29.45:0,29,1174	0/0:33,0:32:72.24:0,72,1099	0/0:9,0:9:24.08:0,24,367
chr10	97632185	.	C	CAG	46.11	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=4.692;DP=666;FS=3.439;HRun=0;HaplotypeScore=135.2438;InbreedingCoeff=0.7302;MQ=42.95;MQ0=45;MQRankSum=-3.021;QD=1.36;ReadPosRankSum=0.960;VQSLOD=2.6732;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,15:16:6:94,6,0	0/0:6,0:6:18.06:0,18,234	./.	./.	0/0:24,0:22:8.80:0,9,106	0/0:31,0:29:39.13:0,39,505	0/0:24,0:17:27.09:0,27,350	0/0:57,0:24:29.99:0,30,322	0/0:12,0:12:20.79:0,21,272	0/0:35,0:31:72.21:0,72,904	0/0:18,0:14:9.03:0,9,117	0/0:24,0:24:2.34:0,2,466	0/0:25,0:24:54.15:0,54,684	0/0:24,0:22:30.01:0,30,389	0/0:24,0:24:36.10:0,36,451	1/1:2,10:12:5.75:52,6,0	0/0:29,0:28:62.70:0,63,795	0/0:14,0:14:30.10:0,30,390	0/0:25,0:15:31.62:0,32,458	0/0:24,0:23:63.20:0,63,812	0/0:35,0:32:69.09:0,69,849	0/0:30,0:29:26.01:0,26,312	0/0:32,0:31:45.07:0,45,530	0/0:42,0:40:82.12:0,82,1030	0/0:13,0:13:21.06:0,21,249	0/0:36,0:33:66.72:0,67,875	0/0:35,0:34:63.17:0,63,786	0/0:13,0:13:33.06:0,33,410
chr10	97632203	.	CAGAG	C	628.82	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=6.260;DP=668;FS=0.869;HRun=0;HaplotypeScore=144.7957;InbreedingCoeff=0.7858;MQ=47.83;MQ0=44;MQRankSum=-3.955;QD=7.40;ReadPosRankSum=2.202;VQSLOD=2.8708;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,19:21:5.81:102,6,0	0/0:6,0:6:18.06:0,18,473	0/0:7,0:5:8.92:0,9,137	0/0:13,0:5:5.85:0,6,64	0/0:24,0:23:15.05:0,15,385	0/0:33,0:31:45.14:0,45,1043	0/0:27,0:20:36.11:0,36,778	0/0:38,1:16:45.14:0,45,894	0/0:13,0:13:27.47:0,27,405	0/0:30,0:27:81.14:0,81,1805	0/0:21,0:17:17.93:0,18,352	0/0:21,0:21:44.13:0,44,1079	0/0:24,0:23:42.75:0,43,1186	0/0:26,0:24:39.12:0,39,875	0/0:21,0:21:42.13:0,42,984	1/1:3,15:18:8.81:120,9,0	0/0:25,0:24:66.18:0,66,1526	1/1:5,10:15:30.10:533,30,0	0/1:27,0:12:0.58:1,0,796	0/0:31,0:29:78.69:0,79,1756	0/0:34,0:31:68.88:0,69,1614	0/0:35,0:34:41.92:0,42,898	0/0:30,0:27:48.16:0,48,1108	0/0:35,0:34:79.04:0,79,1801	0/0:12,0:12:24.08:0,24,578	0/0:33,0:30:63.02:0,63,1901	0/0:30,0:29:75.16:0,75,1627	0/0:13,0:13:39.11:0,39,891
chr10	97632898	.	T	TA	2466.68	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-8.996;DP=517;FS=0.000;HRun=10;HaplotypeScore=54.5883;InbreedingCoeff=0.8192;MQ=73.42;MQ0=0;MQRankSum=-0.604;QD=18.97;ReadPosRankSum=0.703;VQSLOD=4.1701;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:56.91:0,57,465	0/0:8,0:8:20.93:0,21,167	0/0:13,0:12:15.59:0,16,100	0/1:16,0:15:19.61:20,0,118	0/0:29,0:30:79.94:0,80,646	0/0:23,0:23:62.92:0,63,515	0/0:18,0:18:35.91:0,36,296	0/0:30,0:30:62.89:0,63,515	0/0:23,0:23:53.91:0,54,443	0/0:16,0:16:41.93:0,42,341	0/0:16,0:16:29.92:0,30,244	0/0:20,0:21:49.90:0,50,385	0/0:17,0:17:41.62:0,42,344	0/0:11,0:11:29.95:0,30,244	0/0:27,0:27:68.89:0,69,562	0/0:2,0:23:38.70:0,39,112	0/0:19,0:19:53.92:0,54,441	0/0:14,0:14:32.89:0,33,260	1/1:7,19:27:61.52:614,62,0	1/1:6,16:22:23.50:453,23,0	1/1:1,11:12:30.08:320,30,0	0/0:12,1:13:0.96:0,1,214	0/0:15,0:15:41.91:0,42,339	0/0:8,0:8:23.97:0,24,197	0/0:13,1:14:6.82:0,7,250	1/1:5,20:25:60.12:623,60,0	1/1:8,20:28:38.51:614,39,0	0/0:7,0:7:17.97:0,18,148
chr10	97634240	.	G	GC	772.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.987;DP=664;FS=0.000;HRun=6;HaplotypeScore=68.3116;InbreedingCoeff=0.8495;MQ=91.46;MQ0=0;MQRankSum=-2.932;QD=27.60;ReadPosRankSum=0.640;VQSLOD=4.1075;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:99:0,108,1097	0/0:8,0:8:24.05:0,24,245	0/0:34,0:34:77.51:0,78,725	0/0:20,0:20:42.94:0,43,461	0/0:27,0:27:66.11:0,66,658	0/0:21,0:21:54.12:0,54,551	0/0:28,0:28:78.13:0,78,776	0/0:37,0:37:99:0,105,1056	0/0:22,0:22:60.09:0,60,596	0/0:28,0:28:75.15:0,75,756	0/0:20,0:20:48.10:0,48,489	0/0:40,0:40:99:0,102,1040	0/0:22,0:22:66.14:0,66,667	0/0:29,0:29:75.16:0,75,760	0/0:20,0:20:51.11:0,51,520	1/1:2,26:28:69.22:868,69,0	0/0:24,0:24:72.16:0,72,735	0/0:26,0:26:69.15:0,69,704	0/0:22,0:22:51.11:0,51,520	0/0:20,0:20:57.06:0,57,562	0/0:17,0:17:48.10:0,48,484	0/0:25,0:25:60.03:0,60,590	0/0:18,0:18:54.12:0,54,551	0/0:20,0:20:57.10:0,57,571	0/0:19,0:19:51.09:0,51,512	0/0:26,0:26:72.14:0,72,722	0/0:24,0:24:60.14:0,60,611	0/0:1,0:1:3.01:0,3,31
chr10	97634683	.	T	TC	2418.84	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.363;DP=686;FS=5.008;HRun=0;HaplotypeScore=64.0807;InbreedingCoeff=0.9994;MQ=78.95;MQ0=0;MQRankSum=-2.059;QD=43.98;ReadPosRankSum=2.021;VQSLOD=4.2895;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.26:0,78,1091	0/0:14,0:14:42.14:0,42,584	0/0:18,0:18:54.17:0,54,738	0/0:17,0:17:38.49:0,38,506	0/0:32,0:32:96.32:0,96,1343	0/0:29,0:29:87.28:0,87,1200	0/0:18,0:18:54.18:0,54,755	0/0:31,0:31:87.28:0,87,1202	0/0:23,0:23:69.23:0,69,965	0/0:32,0:32:93.30:0,93,1287	0/0:27,0:27:78.26:0,78,1090	0/0:25,0:25:75.25:0,75,1049	0/0:24,0:24:72.24:0,72,1006	0/0:10,0:10:27.09:0,27,377	0/0:26,0:26:78.24:0,78,1063	1/1:0,33:33:96.33:1534,96,0	0/0:25,0:25:75.25:0,75,1042	1/1:1,21:22:63.21:1007,63,0	0/0:21,0:21:63.19:0,63,847	0/0:30,0:30:87.29:0,87,1216	0/0:35,0:35:99:0,102,1423	0/0:23,0:23:63.18:0,63,847	0/0:24,0:24:72.24:0,72,1005	0/0:20,0:20:60.20:0,60,839	0/0:24,0:24:72.24:0,72,1007	0/0:41,0:41:99:0,120,1679	0/0:22,0:21:66.22:0,66,922	0/0:12,0:12:36.12:0,36,503
chr10	97635331	.	T	TG	1615.12	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.244;DP=803;FS=14.864;HRun=5;HaplotypeScore=81.2983;InbreedingCoeff=0.9841;MQ=88.04;MQ0=0;MQRankSum=-0.602;QD=29.91;ReadPosRankSum=1.670;VQSLOD=2.7114;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,141,1464	0/0:14,0:14:33.08:0,33,354	0/0:28,0:28:65.35:0,65,725	0/0:29,0:29:68.27:0,68,730	0/0:21,0:21:60.02:0,60,626	0/0:12,0:12:36.07:0,36,378	0/0:41,0:41:99:0,114,1209	0/0:24,0:24:60.13:0,60,634	0/0:35,0:35:96.09:0,96,978	0/0:31,0:31:75.65:0,76,806	0/0:19,0:19:54.11:0,54,569	0/0:35,0:35:99:0,99,1063	0/0:22,0:22:60.14:0,60,637	0/0:33,0:33:96.24:0,96,1032	0/0:35,0:35:87.11:0,87,898	1/1:3,23:26:66.21:868,66,0	0/0:34,0:34:99:0,102,1081	1/1:3,25:28:66.16:868,66,0	0/0:28,0:28:72.07:0,72,742	0/0:25,0:25:75.16:0,75,794	0/0:58,0:58:99:0,153,1602	0/0:31,0:31:84.19:0,84,892	0/0:21,0:21:57.14:0,57,612	0/0:36,0:36:99:0,108,1128	0/0:31,0:31:87.22:0,87,935	0/0:18,0:18:42.10:0,42,451	0/0:30,0:30:84.18:0,84,888	0/0:5,0:5:12.03:0,12,129
chr10	97637790	.	GAATT	G	898.87	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.339;DP=609;FS=14.929;HRun=0;HaplotypeScore=104.1749;InbreedingCoeff=0.9943;MQ=82.45;MQ0=0;MQRankSum=-2.703;QD=37.45;ReadPosRankSum=2.478;VQSLOD=3.1903;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,3248	0/0:10,0:10:27.09:0,27,695	0/0:20,0:20:34.91:0,35,639	0/0:16,0:16:32.95:0,33,628	0/0:19,0:19:54.19:0,54,1426	0/0:21,0:21:57.18:0,57,1428	0/0:28,0:28:84.29:0,84,2218	0/0:26,0:26:69.23:0,69,1772	0/0:17,0:17:51.18:0,51,1319	0/0:26,0:26:75.24:0,75,1880	0/0:12,0:12:36.12:0,36,951	0/0:29,0:29:84.19:0,84,2164	0/0:19,0:19:48.16:0,48,1262	0/0:17,0:17:48.16:0,48,1268	0/0:24,0:24:66.23:0,66,1732	0/0:20,0:20:60.21:0,60,1552	0/0:32,0:32:93.32:0,93,2444	1/1:1,23:24:54.18:994,54,0	0/0:19,0:19:45.15:0,45,1163	0/0:21,0:21:60.21:0,60,1581	0/0:35,0:35:99:0,105,2624	0/0:26,0:26:75.24:0,75,1872	0/0:14,0:14:39.13:0,39,1021	0/0:24,0:24:69.24:0,69,1821	0/0:19,0:19:57.18:0,57,1451	0/0:19,0:19:54.19:0,54,1424	0/0:21,0:21:60.21:0,60,1581	0/0:7,0:7:21.07:0,21,555
chr10	97638909	.	C	CTCTCTCTCT	646.66	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=5.443;DP=451;FS=22.479;HRun=0;HaplotypeScore=146.0072;InbreedingCoeff=0.0562;MQ=50.47;MQ0=7;MQRankSum=-2.687;QD=6.81;ReadPosRankSum=-2.849;VQSLOD=0.4871;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:8.96:32,0,9	0/0:9,0:9:20.98:0,21,428	0/0:11,0:6:18.05:0,18,206	0/0:16,0:8:17.80:0,18,186	0/0:27,0:27:47.34:0,47,1127	0/0:17,0:17:38.74:0,39,755	0/0:13,0:13:36.12:0,36,757	0/0:22,0:22:60.13:0,60,752	0/0:20,0:20:47.84:0,48,1216	0/0:22,0:22:41.28:0,41,672	0/0:17,0:17:44.87:0,45,822	0/0:20,0:20:54.18:0,54,1275	0/0:8,0:7:18.06:0,18,370	0/0:17,0:17:26.59:0,27,712	0/0:16,0:16:36.12:0,36,866	0/1:10,0:10:69.12:103,0,69	0/0:22,0:21:12.64:0,13,1218	1/1:0,4:5:3.01:148,3,0	0/1:12,0:12:94.14:94,0,262	0/1:24,0:24:57.03:57,0,350	0/0:2,0:2:6.02:0,6,71	0/0:21,0:21:48.16:0,48,1086	0/0:17,0:17:48.15:0,48,875	0/0:24,0:23:52.49:0,52,1118	0/0:25,0:25:59.94:0,60,1361	0/1:17,0:15:79.89:80,0,259	0/1:15,0:15:99:266,0,252	0/0:10,0:9:22.99:0,23,460
chr10	97689827	.	C	CAT	655.64	PASS	AB=0.886;AC=5;AF=0.089;AN=56;BaseQRankSum=-1.885;DP=658;FS=3.577;HRun=0;HaplotypeScore=85.3737;InbreedingCoeff=0.3292;MQ=57.87;MQ0=22;MQRankSum=-4.647;QD=6.19;ReadPosRankSum=-4.192;VQSLOD=1.9967;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:50,0:50:13.56:14,0,242	0/0:6,0:6:18.01:0,18,234	0/0:42,0:4:7.78:0,8,65	0/0:50,0:9:18.53:0,19,161	0/0:23,0:22:61.80:0,62,777	0/0:26,0:26:75.14:0,75,1128	0/0:29,0:29:87.12:0,87,1175	1/1:9,26:36:93.23:704,93,0	0/0:23,0:22:57.09:0,57,798	0/0:20,0:19:54.05:0,54,784	0/0:16,0:16:36.09:0,36,550	0/0:17,0:17:48.02:0,48,636	0/0:23,0:23:69.03:0,69,973	0/0:19,0:19:57.02:0,57,824	0/0:12,0:12:35.97:0,36,436	0/0:10,0:10:3:0,3,25	0/0:27,0:26:69.11:0,69,974	0/1:10,0:11:10.01:10,0,54	0/0:19,0:19:53.98:0,54,702	0/0:24,0:23:65.86:0,66,955	0/0:43,0:44:99:0,111,1459	0/0:17,0:17:48.02:0,48,689	0/0:18,0:18:51.03:0,51,668	0/0:22,0:20:60.08:0,60,902	0/0:24,0:24:69.09:0,69,948	0/0:20,0:20:51.37:0,51,593	0/0:20,0:20:54.07:0,54,802	0/1:6,2:8:11.04:48,0,11
chr10	97689839	.	T	TGC	768.66	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=6.110;DP=625;FS=2.774;HRun=0;HaplotypeScore=78.2072;InbreedingCoeff=0.8006;MQ=54.33;MQ0=29;MQRankSum=-3.403;QD=7.46;ReadPosRankSum=-3.930;VQSLOD=1.8591;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:49,4:53:20.14:551,20,0	0/0:6,0:6:15.02:0,15,168	0/0:35,0:1:3:0,3,25	0/0:42,0:7:14.76:0,15,96	0/0:24,0:23:43.49:0,43,421	0/0:31,0:31:86.96:0,87,876	0/0:27,0:27:42.35:0,42,512	1/1:15,0:14:28.25:150,28,0	0/0:22,0:21:53.96:0,54,530	0/0:21,0:19:54.09:0,54,596	0/0:20,0:19:36.67:0,37,335	0/0:15,0:15:33.05:0,33,380	0/0:22,0:21:45.02:0,45,464	0/0:17,0:17:48.07:0,48,550	0/0:10,0:10:18.02:0,18,196	./.	0/0:28,0:26:26.63:0,27,593	1/1:9,0:8:9.27:40,9,0	0/0:22,0:19:35.75:0,36,372	0/0:26,0:25:62.95:0,63,648	0/0:43,0:42:77.61:0,78,711	0/0:15,0:15:39.01:0,39,386	0/0:16,0:16:30.01:0,30,321	0/0:26,0:24:42.31:0,42,602	0/0:22,0:22:51.04:0,51,557	0/1:20,0:20:11.55:111,0,12	0/0:19,0:19:53.95:0,54,559	1/1:4,0:6:11.39:72,11,0
chr10	97689847	.	C	CACACACACAT	717.14	PASS	AB=0.900;AC=5;AF=0.093;AN=54;BaseQRankSum=5.807;DP=596;FS=12.736;HRun=0;HaplotypeScore=151.6275;InbreedingCoeff=0.4308;MQ=53.24;MQ0=31;MQRankSum=-5.653;QD=10.70;ReadPosRankSum=-1.932;VQSLOD=1.7402;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:50.54:0,51,633	0/0:5,0:5:15.04:0,15,396	0/0:31,0:1:2.99:0,3,23	0/0:39,0:6:14.76:0,15,110	0/0:23,0:22:48.07:0,48,1013	0/0:31,0:31:18.42:0,18,1689	0/1:28,0:28:13.02:13,0,895	0/1:20,0:19:99:113,0,139	0/0:23,0:22:51.07:0,51,1075	0/0:24,0:22:57.07:0,57,1205	0/0:20,0:19:44.02:0,44,677	0/0:12,0:12:36.08:0,36,926	0/0:19,0:18:30.05:0,30,715	0/0:19,0:18:47.75:0,48,1157	0/0:9,0:9:23.71:0,24,443	./.	0/0:28,0:26:69.14:0,69,1576	0/1:8,4:13:0.39:512,0,0	0/0:19,0:16:44.95:0,45,837	0/0:23,0:22:60.13:0,60,1472	0/0:33,0:32:50.57:0,51,1084	0/0:14,0:14:33.03:0,33,649	0/0:14,0:13:36.07:0,36,732	0/0:25,0:23:41.38:0,41,1286	0/0:22,0:22:54.13:0,54,1227	0/0:17,0:17:40.59:0,41,712	0/0:22,0:22:60.08:0,60,1382	1/1:5,0:5:12.37:196,12,0
chr10	97690179	.	C	CTT	1895.17	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.361;DP=604;FS=16.564;HRun=9;HaplotypeScore=86.2341;InbreedingCoeff=0.9905;MQ=73.75;MQ0=0;MQRankSum=0.252;QD=22.56;ReadPosRankSum=-0.946;VQSLOD=1.1227;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:53.82:0,54,735	0/0:6,0:6:15.03:0,15,160	0/0:33,0:24:23.05:0,23,235	0/0:36,0:18:17.47:0,17,176	0/0:22,0:22:63.15:0,63,671	0/0:28,0:28:75.17:0,75,798	0/0:16,0:15:42.11:0,42,447	1/1:10,17:29:57.15:822,57,0	0/0:11,0:11:33.08:0,33,351	0/0:27,0:27:69.13:0,69,727	0/0:29,0:29:75.82:0,76,816	0/0:18,0:18:48.12:0,48,511	0/0:9,0:9:24.06:0,24,255	0/0:16,0:16:45.10:0,45,479	0/0:20,0:20:47.78:0,48,511	1/1:0,10:11:24.08:368,24,0	0/0:21,0:21:54.11:0,54,575	1/1:4,0:32:73.96:496,74,0	0/0:28,0:29:65.86:0,66,677	0/0:26,0:27:71.90:0,72,746	0/0:17,0:17:48.09:0,48,511	0/0:18,0:18:45.09:0,45,478	0/0:23,0:23:63.11:0,63,654	0/0:18,0:18:54.12:0,54,566	0/0:20,0:20:51.09:0,51,543	0/0:25,0:25:57.12:0,57,607	0/0:21,0:21:54.11:0,54,573	1/1:4,8:12:24.08:369,24,0
chr10	97690372	.	G	GTGTGTGTATGTA	2408.45	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-4.399;DP=584;FS=15.556;HRun=0;HaplotypeScore=193.6954;InbreedingCoeff=0.6876;MQ=58.60;MQ0=20;MQRankSum=-1.539;QD=23.16;ReadPosRankSum=-4.095;VQSLOD=0.9472;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:22:27.56:0,28,765	0/0:5,0:5:12.03:0,12,280	0/0:22,0:12:18.02:0,18,254	0/0:20,0:17:34.47:0,34,491	0/0:11,0:11:27.09:0,27,707	0/0:26,0:25:41.64:0,42,1015	0/0:24,0:23:51.50:0,52,1051	1/1:46,0:45:99:1992,116,0	0/0:19,0:19:45.09:0,45,852	0/0:23,0:22:55.33:0,55,1164	0/0:18,0:17:29.92:0,30,832	0/0:16,0:15:3.39:0,3,566	0/0:20,0:20:51.63:0,52,1029	0/0:13,0:13:36.11:0,36,965	0/0:30,0:29:60.17:0,60,1301	1/1:26,0:24:2.82:53,3,0	0/0:24,0:24:59.92:0,60,1181	0/0:14,0:13:18.06:0,18,304	0/0:14,0:13:35.92:0,36,532	0/0:21,0:21:51.14:0,51,1121	0/0:38,0:37:69.15:0,69,1461	0/0:18,0:17:36.11:0,36,850	0/0:18,0:18:41.69:0,42,1064	0/0:26,0:25:53.89:0,54,1422	0/0:19,0:18:40.27:0,40,971	0/1:24,0:23:18.20:18,0,912	0/0:16,0:16:35.91:0,36,907	1/1:1,3:8:7.49:477,7,0
chr10	97690376	.	G	GTGTATGTA	1554.07	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.490;DP=575;FS=14.177;HRun=0;HaplotypeScore=146.6636;InbreedingCoeff=0.9100;MQ=54.88;MQ0=21;MQRankSum=-0.361;QD=21.00;ReadPosRankSum=-2.200;VQSLOD=2.2325;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:24:27.09:0,27,619	0/0:5,0:5:12.03:0,12,242	0/0:18,0:8:18.01:0,18,254	0/0:18,0:15:34.47:0,34,493	0/0:13,0:13:30.09:0,30,620	0/0:27,0:26:47.34:0,47,916	0/0:23,0:22:43.98:0,44,838	1/1:44,0:43:89.89:1273,90,0	0/0:21,0:21:47.71:0,48,766	0/0:22,0:21:58.92:0,59,1085	0/0:19,0:18:29.72:0,30,677	0/0:15,0:14:23.67:0,24,488	0/0:19,0:19:50.74:0,51,953	0/0:13,0:13:36.11:0,36,798	0/0:28,0:27:63.18:0,63,1197	1/1:8,14:22:4.29:96,4,0	0/0:24,0:24:59.98:0,60,1094	0/0:15,0:13:18.06:0,18,273	0/0:13,0:12:33.08:0,33,501	0/0:20,0:20:57.14:0,57,1046	0/0:35,0:34:69.17:0,69,1326	0/0:19,0:18:42.10:0,42,799	0/0:19,0:19:41.38:0,41,912	0/0:28,0:27:59.91:0,60,1265	0/0:20,0:19:42.02:0,42,899	0/0:24,0:23:45.62:0,46,903	0/0:16,0:16:39.38:0,39,756	1/1:6,0:6:9.92:313,10,0
chr10	97690378	.	G	GTA	490.30	PASS	AB=0.801;AC=4;AF=0.071;AN=56;BaseQRankSum=4.642;DP=565;FS=15.927;HRun=0;HaplotypeScore=92.2744;InbreedingCoeff=0.3612;MQ=54.11;MQ0=21;MQRankSum=2.601;QD=7.00;ReadPosRankSum=-2.084;VQSLOD=1.1045;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:25:27.01:0,27,285	0/0:5,0:5:12.01:0,12,137	0/0:17,0:7:17.96:0,18,165	0/0:16,0:13:29.12:0,29,281	0/0:13,0:13:30.01:0,30,314	0/0:25,0:24:43.61:0,44,436	0/0:23,0:22:40.98:0,41,385	0/1:14,27:40:99:529,0,111	0/0:20,0:20:44.45:0,44,412	0/0:22,0:21:59.77:0,60,594	0/0:20,0:19:26.62:0,27,324	0/0:15,0:14:23.68:0,24,255	0/0:19,0:19:50.52:0,51,461	0/0:13,0:13:36.04:0,36,398	0/0:28,0:27:62.96:0,63,628	1/1:22,0:21:5.59:47,6,0	0/0:23,0:23:59.61:0,60,568	0/0:13,0:11:17.84:0,18,131	0/0:14,0:13:35.89:0,36,306	0/0:20,0:20:56.93:0,57,553	0/0:34,0:33:65.98:0,66,682	0/0:20,0:19:41.79:0,42,411	0/0:19,0:19:41.08:0,41,450	0/0:27,0:26:59.90:0,60,668	0/0:20,0:19:42.03:0,42,459	0/0:25,0:24:36.58:0,37,384	0/0:16,0:16:35.13:0,35,356	0/1:6,0:6:18.46:18,0,27
chr10	97690420	.	G	GAA	1050.26	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=0.056;DP=590;FS=10.750;HRun=1;HaplotypeScore=98.5556;InbreedingCoeff=0.5981;MQ=54.32;MQ0=19;MQRankSum=1.475;QD=18.43;ReadPosRankSum=-0.220;VQSLOD=0.1181;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:18.09:0,18,127	0/0:1,0:1:3:0,3,25	0/0:18,0:10:29.97:0,30,285	0/0:29,0:12:26.12:0,26,258	0/0:13,0:13:29.87:0,30,323	0/0:25,0:24:50.83:0,51,500	0/0:24,0:23:41.52:0,42,438	0/0:21,0:20:47.47:0,47,376	0/0:20,0:20:30.81:0,31,290	0/0:27,0:27:74.60:0,75,778	0/0:23,0:22:44.71:0,45,445	0/0:18,0:17:26.47:0,26,228	0/0:18,0:18:41.25:0,41,486	0/0:16,0:16:41.86:0,42,442	0/0:29,0:28:62.67:0,63,714	0/1:26,0:25:0.76:342,0,1	0/0:21,0:21:56.90:0,57,618	0/0:15,0:13:8.79:0,9,55	0/0:13,0:11:29.79:0,30,299	0/0:24,0:24:69.06:0,69,738	0/0:38,0:36:74.24:0,74,734	0/0:22,0:21:51.09:0,51,634	0/0:22,0:22:35.74:0,36,367	0/0:26,0:26:65.62:0,66,738	0/0:19,0:18:39.04:0,39,419	1/1:6,21:31:4.11:800,4,0	0/0:22,0:22:56.66:0,57,545	0/0:6,0:6:8.85:0,9,57
chr10	97690433	.	A	AGAGT	123.10	PASS	AB=0.898;AC=4;AF=0.071;AN=56;BaseQRankSum=7.351;DP=577;FS=2.006;HRun=0;HaplotypeScore=127.9637;InbreedingCoeff=0.0167;MQ=63.87;MQ0=14;MQRankSum=-4.427;QD=1.64;ReadPosRankSum=-0.079;VQSLOD=2.5086;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:20:37.98:38,0,137	0/0:1,0:1:3:0,3,25	0/0:25,0:17:37.48:0,37,428	0/0:37,0:21:39.76:0,40,465	0/0:12,0:12:26.84:0,27,365	0/0:21,0:20:35.81:0,36,477	0/0:26,0:25:50.88:0,51,583	0/0:28,0:27:32.76:0,33,467	0/0:21,0:21:44.77:0,45,411	0/0:27,0:27:68.53:0,69,890	0/0:17,0:17:29.99:0,30,405	0/1:16,0:16:13.54:14,0,277	0/0:18,0:18:51.03:0,51,679	0/0:14,0:14:35.93:0,36,472	0/0:31,0:30:66.08:0,66,893	0/1:25,0:24:62.93:63,0,187	0/0:19,0:19:48.90:0,49,687	0/1:4,8:13:4.66:116,0,5	0/0:21,0:19:50.93:0,51,542	0/0:20,0:20:60.09:0,60,794	0/0:32,0:30:68.61:0,69,849	0/0:21,0:21:42.10:0,42,697	0/0:21,0:21:36.01:0,36,424	0/0:22,0:22:45.10:0,45,734	0/0:14,0:13:9.02:0,9,391	0/0:28,0:28:18.23:0,18,486	0/0:22,0:22:44.79:0,45,566	0/0:3,0:3:4.09:0,4,31
chr10	97690953	.	T	TG	283.74	PASS	AB=0.867;AC=3;AF=0.054;AN=56;BaseQRankSum=6.292;DP=654;FS=6.563;HRun=0;HaplotypeScore=83.0020;InbreedingCoeff=-0.0536;MQ=64.74;MQ0=3;MQRankSum=-6.540;QD=3.64;ReadPosRankSum=-4.633;VQSLOD=0.8951;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1656	0/0:13,0:13:39.12:0,39,516	0/0:28,0:19:50.94:0,51,639	0/0:18,0:15:38.78:0,39,494	0/0:30,0:30:90.29:0,90,1241	0/0:23,0:23:66.19:0,66,871	0/0:15,0:15:45.15:0,45,629	0/1:35,17:47:99:354,0,1009	0/0:12,0:12:36.12:0,36,503	0/0:29,0:29:84.26:0,84,1133	0/0:31,0:31:90.29:0,90,1239	0/0:21,0:21:63.19:0,63,835	0/0:14,0:14:42.14:0,42,587	0/0:11,0:11:33.10:0,33,446	0/0:18,0:18:54.17:0,54,739	0/0:17,0:17:25.35:0,25,221	0/0:25,0:25:72.18:0,72,962	0/1:9,2:11:13.55:14,0,189	0/0:26,0:25:72.17:0,72,983	0/0:33,0:33:93.30:0,93,1281	0/0:18,0:18:54.18:0,54,755	0/0:28,0:28:81.25:0,81,1101	0/0:23,0:23:69.23:0,69,964	0/0:31,0:31:93.24:0,93,1244	0/0:18,0:18:51.16:0,51,699	0/0:29,0:29:87.21:0,87,1164	0/0:24,0:24:72.21:0,72,958	0/1:15,0:15:9.01:9,0,107
chr10	97690973	.	G	GTTTGTTTGTTTATTTA	7072.77	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=3.637;DP=659;FS=9.770;HRun=0;HaplotypeScore=265.5067;InbreedingCoeff=0.8300;MQ=59.45;MQ0=3;MQRankSum=-10.011;QD=75.24;ReadPosRankSum=-1.309;VQSLOD=2.6788;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:95.82:0,96,4562	0/0:12,0:12:36.11:0,36,1190	0/0:28,0:19:31.77:0,32,614	0/0:18,0:15:40.95:0,41,1001	0/0:26,0:26:78.24:0,78,2704	0/0:21,0:21:63.19:0,63,2153	0/0:16,0:16:45.12:0,45,1420	1/1:49,0:44:99:3244,114,0	0/0:13,0:13:39.12:0,39,1454	0/0:33,0:33:93.28:0,93,3280	0/0:28,0:28:81.25:0,81,3021	0/0:24,0:24:66.19:0,66,2032	0/0:12,0:12:36.12:0,36,1418	0/0:8,0:8:24.07:0,24,670	0/0:18,0:18:54.17:0,54,1820	1/1:1,9:20:14.81:1179,15,0	0/0:24,0:24:61.05:0,61,1871	0/1:7,0:7:33.66:291,0,34	0/0:26,0:25:75.24:0,75,2286	0/0:35,0:35:90.24:0,90,3584	0/0:23,0:23:63.18:0,63,2052	0/0:26,0:26:75.26:0,75,2560	0/0:19,0:19:54.19:0,54,2216	0/0:37,0:37:99:0,111,4062	0/0:18,0:18:51.14:0,51,1627	0/0:34,0:34:99:0,102,3830	0/0:22,0:22:63.18:0,63,2123	1/1:0,10:18:30.10:2359,30,0
chr10	97690976	.	TA	T	404.41	PASS	AB=0.895;AC=4;AF=0.071;AN=56;BaseQRankSum=7.623;DP=651;FS=5.710;HRun=1;HaplotypeScore=83.2613;InbreedingCoeff=0.4047;MQ=60.95;MQ0=3;MQRankSum=-5.823;QD=5.47;ReadPosRankSum=-1.202;VQSLOD=0.0608;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:48:99:0,115,2069	0/0:12,0:12:36.12:0,36,575	0/0:25,0:17:27.31:0,27,584	0/0:19,0:16:43:0,43,615	0/0:26,0:26:78.27:0,78,1239	0/0:22,0:22:66.20:0,66,1009	0/0:16,0:16:48.11:0,48,693	0/1:36,13:44:99:452,0,735	0/0:13,0:13:39.13:0,39,623	0/0:35,0:35:99:0,105,1572	0/0:28,0:28:84.10:0,84,1284	0/0:24,0:24:72.25:0,72,1145	0/0:14,0:14:42.11:0,42,623	0/0:8,0:8:24.08:0,24,383	0/0:18,0:18:54.18:0,54,863	1/1:11,0:11:8.25:23,8,0	0/0:22,0:22:66.22:0,66,1046	0/0:7,0:7:12.59:0,13,160	0/0:27,0:26:78.25:0,78,1215	0/0:34,0:34:96.33:0,96,1514	0/0:23,0:23:66.20:0,66,1008	0/0:26,0:26:78.25:0,78,1214	0/0:18,0:18:54.18:0,54,862	0/0:38,0:38:99:0,114,1797	0/0:17,0:17:51.17:0,51,813	0/0:35,0:35:99:0,105,1653	0/0:21,0:21:63.20:0,63,982	0/1:14,0:14:19.44:35,0,19
chr10	97691604	.	A	AGAAAATAGGAAGGCAGGCCAAA	1622.26	PASS	AB=0.556;AC=23;AF=0.958;AN=24;BaseQRankSum=-1.387;DP=29;FS=3.468;HRun=0;HaplotypeScore=28.7129;InbreedingCoeff=-0.1906;MQ=153.06;MQ0=0;MQRankSum=-0.694;QD=62.39;ReadPosRankSum=-0.694;VQSLOD=1.7232;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,0:2:2.97:20,3,0	1/1:3,1:5:12.01:545,12,0	0/1:1,0:5:4.46:745,0,4	./.	1/1:2,0:2:3.01:49,3,0	./.	1/1:2,0:2:6.01:79,6,0	1/1:1,0:1:3.01:56,3,0	1/1:1,0:1:3:26,3,0	./.	./.	1/1:3,0:3:3.01:57,3,0	1/1:2,0:2:3:25,3,0	1/1:1,0:1:3.01:49,3,0	./.	./.	./.	./.	1/1:1,0:1:2.97:20,3,0	1/1:1,0:1:3:25,3,0	./.	./.	./.	./.	./.	./.	./.
chr10	97699543	.	ATTTCCTCCTG	A	544.03	PASS	AC=6;AF=1.00;AN=6;DP=243;FS=0.000;HRun=0;HaplotypeScore=78.0495;MQ=4.56;MQ0=237;QD=21.76;VQSLOD=1.9178;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:6,1:1:3.01:102,3,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:6,3:3:9.03:305,9,0	./.	./.	./.	./.	1/1:7,2:2:6.02:203,6,0	./.	./.	./.
chr10	97699674	.	A	AT	876.15	PASS	AC=16;AF=1.000;AN=16;DP=119;FS=0.000;HRun=1;HaplotypeScore=61.4085;MQ=12.61;MQ0=95;QD=22.47;VQSLOD=3.4605;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,2:2:6.02:95,6,0	./.	./.	./.	./.	./.	./.	./.	1/1:4,2:2:6.02:96,6,0	1/1:4,1:1:3.01:47,3,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:1,4:4:12.04:190,12,0	./.	1/1:2,3:4:12.04:188,12,0	1/1:1,3:3:9.03:141,9,0	./.	1/1:3,3:3:9.03:143,9,0	1/1:3,1:1:3.01:48,3,0	./.	./.
chr10	97699690	.	T	TGC	147.99	PASS	AB=0.571;AC=7;AF=0.88;AN=8;DP=73;FS=0.000;HRun=0;HaplotypeScore=47.7180;MQ=12.93;MQ0=57;QD=10.57;VQSLOD=3.0497;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:2,2:2:6.02:117,6,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/1:1,3:3:0:0,0,0	./.	./.	1/1:2,2:3:2.87:36,3,0	./.	./.	1/1:1,1:1:3.01:61,3,0	./.	./.
chr10	97716225	.	A	ACCAG	490.23	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=0.268;DP=524;FS=0.000;HRun=0;HaplotypeScore=95.6683;InbreedingCoeff=0.8370;MQ=52.69;MQ0=6;MQRankSum=-2.345;QD=10.00;ReadPosRankSum=-2.226;VQSLOD=2.4133;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:30.01:0,30,431	0/0:8,0:8:17.13:0,17,255	0/0:28,0:11:14.19:0,14,230	0/0:30,0:19:38.84:0,39,486	0/0:6,0:6:15.03:0,15,209	0/0:15,0:15:24.01:0,24,313	0/0:32,0:32:65.58:0,66,845	1/1:21,0:19:20.90:201,21,0	0/0:19,0:19:32.23:0,32,482	0/0:16,0:16:33.11:0,33,567	0/0:15,0:15:26.98:0,27,318	0/0:14,0:14:33.10:0,33,516	0/0:23,0:22:45.10:0,45,698	0/0:24,0:24:48.14:0,48,752	0/0:30,0:30:63.02:0,63,953	1/1:3,11:14:11.55:245,12,0	0/0:39,0:39:96.14:0,96,1468	0/0:15,0:15:26.93:0,27,339	0/0:21,0:16:32.96:0,33,315	0/1:11,0:11:0.02:0,0,249	0/0:26,0:26:47.99:0,48,640	0/0:10,0:9:18.05:0,18,271	0/0:7,0:7:9.01:0,9,122	0/0:35,0:35:75.13:0,75,1100	0/0:9,0:9:14.54:0,15,208	0/0:16,0:16:27.01:0,27,376	0/0:17,0:17:39.11:0,39,594	1/1:3,0:3:9.03:175,9,0
chr10	97716267	.	TAACCAACC	T	466.59	PASS	AB=1.000;AC=3;AF=0.060;AN=50;BaseQRankSum=5.095;DP=577;FS=4.105;HRun=0;HaplotypeScore=142.1067;InbreedingCoeff=0.5726;MQ=51.10;MQ0=13;MQRankSum=-1.284;QD=11.38;ReadPosRankSum=-0.214;VQSLOD=2.5130;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:25.17:0,25,1135	0/0:10,0:10:15.05:0,15,435	./.	./.	0/0:14,0:14:14.94:0,15,289	0/0:19,0:18:27.09:0,27,830	0/0:35,0:34:42.12:0,42,1094	0/0:23,0:23:23.91:0,24,228	0/0:18,0:18:24.07:0,24,698	0/0:19,0:19:26.98:0,27,636	0/0:16,0:16:18.04:0,18,310	0/0:25,0:25:48.16:0,48,1406	0/0:17,0:17:21.07:0,21,767	0/0:28,0:28:24.07:0,24,797	0/0:32,0:32:42.14:0,42,1198	0/0:10,0:10:12:0,12,135	0/0:43,0:43:69.20:0,69,2178	0/1:9,0:17:25.85:26,0,64	0/0:34,0:29:36.12:0,36,1191	0/0:11,0:10:12.04:0,12,484	0/0:32,0:32:54.13:0,54,1662	0/0:14,0:13:18:0,18,341	0/0:11,0:10:11.99:0,12,300	0/0:42,0:42:66.21:0,66,2251	0/0:10,0:10:18.06:0,18,597	1/1:14,10:23:29.99:545,30,0	0/0:13,0:13:18.06:0,18,448	./.
chr10	97716331	.	CAATT	C	210.44	PASS	AB=0.958;AC=6;AF=0.111;AN=54;BaseQRankSum=7.098;DP=514;FS=0.000;HRun=0;HaplotypeScore=85.0958;InbreedingCoeff=0.4830;MQ=54.69;MQ0=13;MQRankSum=-5.322;QD=5.13;ReadPosRankSum=-1.658;VQSLOD=1.5841;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:76.45:0,76,1827	0/0:11,0:11:19.43:0,19,703	0/0:34,0:11:5.28:0,5,437	0/0:46,0:22:21.50:0,21,1065	0/0:8,0:8:24.08:0,24,533	0/0:19,0:19:51.16:0,51,1160	0/0:28,0:28:81.26:0,81,1784	1/1:0,3:3:3.90:49,4,0	0/0:5,0:5:15.05:0,15,372	0/0:16,0:16:15.10:0,15,985	0/0:5,0:5:12.04:0,12,291	0/0:16,0:16:45.15:0,45,1047	0/0:12,0:12:35.99:0,36,666	0/0:21,0:21:63.09:0,63,1349	0/0:14,0:14:39.13:0,39,899	1/1:9,0:8:10.11:172,10,0	0/0:41,0:41:75.35:0,75,2502	0/1:18,0:18:85.25:85,0,597	0/0:22,0:22:66.04:0,66,1400	0/0:13,0:13:39.13:0,39,873	0/0:37,0:37:99:0,99,2195	0/0:10,0:10:21.07:0,21,474	0/0:9,0:9:24.08:0,24,498	0/0:38,0:38:99:0,111,2605	0/1:10,1:11:24.49:24,0,632	0/0:20,0:20:60.20:0,60,1336	0/0:17,0:17:45.15:0,45,1105	./.
chr10	97716944	.	A	AAT	4667.90	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-1.532;DP=641;FS=0.000;HRun=0;HaplotypeScore=73.9191;InbreedingCoeff=0.9895;MQ=84.54;MQ0=1;MQRankSum=-2.269;QD=56.24;ReadPosRankSum=-1.392;VQSLOD=4.4903;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1988	0/0:10,0:10:30.10:0,30,489	0/0:18,0:18:54.18:0,54,872	0/0:22,0:22:66.18:0,66,1027	0/0:30,0:30:90.29:0,90,1438	0/0:16,0:16:48.16:0,48,783	0/0:26,0:25:66.22:0,66,1071	1/1:1,31:33:96.31:1913,96,0	0/0:18,0:18:54.18:0,54,875	0/0:15,0:15:45.15:0,45,725	0/0:21,0:21:60.20:0,60,962	0/0:21,0:21:60.20:0,60,976	0/0:29,0:29:87.28:0,87,1394	0/0:17,0:17:51.17:0,51,827	0/0:16,0:16:48.16:0,48,778	1/1:2,20:22:11.26:1109,11,0	0/0:24,0:24:72.25:0,72,1163	1/1:1,10:11:30.10:609,30,0	0/0:18,0:18:54.17:0,54,850	0/0:40,0:40:99:0,120,1926	0/0:42,0:42:99:0,126,1989	0/0:15,0:15:45.15:0,45,734	0/0:23,0:23:69.24:0,69,1120	0/0:25,0:25:75.26:0,75,1207	0/0:25,0:25:75.26:0,75,1224	0/0:21,0:21:63.22:0,63,1028	0/0:25,0:25:75.23:0,75,1174	1/1:0,17:17:51.18:1036,51,0
chr10	97717156	.	T	TA	1701.66	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.875;DP=651;FS=4.760;HRun=1;HaplotypeScore=66.8517;InbreedingCoeff=0.9989;MQ=96.09;MQ0=0;MQRankSum=-1.560;QD=40.52;ReadPosRankSum=-1.458;VQSLOD=3.6808;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1713	0/0:9,0:9:27.09:0,27,351	0/0:33,0:33:96.28:0,96,1199	0/0:28,0:28:78.16:0,78,974	0/0:25,0:25:75.24:0,75,973	0/0:9,0:9:27.09:0,27,351	0/0:23,0:23:66.12:0,66,857	1/1:1,21:22:66.21:969,66,0	0/0:15,0:15:45.15:0,45,584	0/0:28,0:28:81.26:0,81,1051	0/0:24,0:24:72.23:0,72,935	0/0:28,0:28:84.26:0,84,1075	0/0:29,0:29:81.26:0,81,1051	0/0:20,0:20:60.19:0,60,778	0/0:24,0:24:69.22:0,69,894	0/0:28,0:28:81.24:0,81,1023	0/0:30,0:30:90.29:0,90,1167	0/0:25,0:25:72.23:0,72,935	0/0:20,0:20:57.19:0,57,740	0/0:18,0:18:54.16:0,54,687	0/0:20,0:20:60.17:0,60,762	0/0:27,0:27:78.25:0,78,1012	0/0:20,0:20:60.20:0,60,779	0/0:18,0:18:48.16:0,48,623	0/0:17,0:17:48.16:0,48,623	0/0:20,0:20:57.18:0,57,739	0/0:26,0:26:75.23:0,75,956	1/1:1,19:20:57.19:854,57,0
chr10	97720978	.	AATGG	A	2065.92	PASS	AC=6;AF=0.120;AN=50;BaseQRankSum=10.019;DP=591;FS=5.106;HRun=0;HaplotypeScore=104.7192;InbreedingCoeff=0.9934;MQ=60.04;MQ0=5;MQRankSum=0.476;QD=29.94;ReadPosRankSum=0.501;VQSLOD=3.4572;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:47.95:821,48,0	0/0:11,0:11:30.03:0,30,717	0/0:22,0:13:30.07:0,30,322	0/0:7,0:6:18:0,18,269	0/0:27,0:26:48.13:0,48,1361	0/0:38,0:38:99:0,108,2214	0/0:26,0:26:72.17:0,72,1475	./.	0/0:19,0:19:48.08:0,48,849	0/0:29,0:29:54.22:0,54,1553	0/0:30,0:30:65.96:0,66,1310	0/0:14,0:14:33.10:0,33,755	0/0:24,0:24:60.11:0,60,1087	0/0:26,0:26:75.10:0,75,1551	0/0:15,0:15:39.13:0,39,961	./.	0/0:22,0:22:55:0,55,1055	1/1:8,0:8:17.80:148,18,0	0/0:20,0:20:57.10:0,57,1067	0/0:43,0:43:99:0,108,2390	0/0:28,0:28:78.19:0,78,1661	0/0:24,0:24:66.10:0,66,1286	0/0:22,0:22:57.09:0,57,1099	0/0:26,0:26:72.19:0,72,1580	0/0:22,0:22:63.06:0,63,1379	1/1:5,29:34:84.14:1236,84,0	0/0:26,0:26:69.15:0,69,1466	./.
chr10	97721005	.	CT	C	168.83	PASS	AC=2;AF=0.040;AN=50;BaseQRankSum=4.339;DP=612;FS=0.000;HRun=3;HaplotypeScore=76.4878;InbreedingCoeff=0.9958;MQ=77.84;MQ0=0;MQRankSum=-1.112;QD=21.10;ReadPosRankSum=0.007;VQSLOD=3.0442;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:72.18:0,72,985	0/0:13,0:13:36.12:0,36,518	0/0:19,0:16:45.09:0,45,587	0/0:24,0:24:59.71:0,60,935	0/0:30,0:30:87.28:0,87,1232	0/0:39,0:39:99:0,117,1650	0/0:31,0:31:93.30:0,93,1320	./.	0/0:19,0:19:51.17:0,51,735	0/0:26,0:26:72.23:0,72,1019	0/0:20,0:20:60.20:0,60,864	0/0:16,0:16:48.16:0,48,690	0/0:22,0:22:60.18:0,60,827	0/0:25,0:25:72.24:0,72,1018	0/0:15,0:15:42.14:0,42,603	./.	0/0:26,0:26:77.73:0,78,1069	1/1:1,7:8:21.07:260,21,0	0/0:24,0:24:66.21:0,66,928	0/0:43,0:43:99:0,123,1733	0/0:33,0:33:99:0,99,1423	0/0:24,0:24:69.23:0,69,989	0/0:22,0:22:63.21:0,63,906	0/0:29,0:29:87.28:0,87,1234	0/0:21,0:21:57.19:0,57,821	0/0:32,0:32:87.28:0,87,1232	0/0:21,0:21:63.21:0,63,907	./.
chr10	97721109	.	G	GA	184.35	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=1.632;DP=513;FS=3.166;HRun=8;HaplotypeScore=53.5213;InbreedingCoeff=0.8329;MQ=74.45;MQ0=0;MQRankSum=0.595;QD=15.36;ReadPosRankSum=0.719;VQSLOD=3.5693;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:59.95:0,60,534	0/0:10,0:10:29.99:0,30,267	0/0:9,0:9:20.49:0,20,169	0/0:12,0:12:14.95:0,15,137	0/0:28,0:28:78.02:0,78,708	0/0:22,0:22:60.02:0,60,549	0/0:15,0:15:38.99:0,39,348	./.	0/0:21,0:21:54.01:0,54,490	0/0:31,0:31:84.03:0,84,765	0/0:21,0:21:60.03:0,60,549	0/0:15,0:15:39.02:0,39,357	0/0:16,0:16:42.01:0,42,384	0/0:24,0:24:65.99:0,66,594	0/0:22,0:22:53.99:0,54,488	0/0:1,0:1:3:0,3,27	0/0:17,0:17:48.03:0,48,439	1/1:2,10:12:24.07:277,24,0	0/0:21,0:21:57.02:0,57,521	0/0:33,0:33:93.02:0,93,842	0/0:16,0:16:45.02:0,45,412	0/0:19,0:19:51.02:0,51,467	0/0:19,0:19:54:0,54,486	0/0:23,0:23:53.96:0,54,480	0/0:22,0:22:54.02:0,54,494	0/0:34,0:34:93.04:0,93,851	0/0:26,0:25:69.01:0,69,626	./.
chr10	97721664	.	GC	G	235.09	PASS	AB=0.707;AC=3;AF=0.060;AN=50;BaseQRankSum=6.171;DP=560;FS=4.092;HRun=1;HaplotypeScore=84.5416;InbreedingCoeff=-0.0588;MQ=62.78;MQ0=62;MQRankSum=-4.186;QD=6.53;ReadPosRankSum=-3.150;VQSLOD=-0.4994;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:5,4:9:0.74:1,0,44	0/0:3,0:3:9.03:0,9,144	0/0:103,0:19:37.30:0,37,461	0/0:121,0:33:29.14:0,29,640	0/0:14,0:11:21.07:0,21,336	0/0:17,0:16:36.59:0,37,568	0/0:22,0:20:60.17:0,60,930	./.	0/0:9,0:8:18.06:0,18,287	0/0:14,0:11:33.11:0,33,528	0/0:5,0:5:12.04:0,12,182	0/0:15,0:14:36.12:0,36,549	0/0:9,0:9:27.09:0,27,422	0/0:19,0:18:45.15:0,45,719	0/0:29,0:29:87.30:0,87,1385	./.	0/0:17,0:17:51.17:0,51,804	0/1:7,4:9:79.74:80,0,117	0/0:14,0:12:36.08:0,36,521	0/0:10,0:10:30.10:0,30,479	0/0:30,0:30:84.29:0,84,1343	0/0:5,0:5:15.05:0,15,240	0/0:19,0:18:48.16:0,48,767	0/0:20,2:22:48.15:0,48,733	0/0:9,0:8:21.07:0,21,336	0/1:9,7:15:99:243,0,325	0/0:15,0:15:39.01:0,39,617	./.
chr10	97721676	.	A	AG	306.05	PASS	AC=2;AF=0.040;AN=50;BaseQRankSum=6.332;DP=516;FS=6.344;HRun=1;HaplotypeScore=98.8477;InbreedingCoeff=0.8138;MQ=70.03;MQ0=18;MQRankSum=-2.347;QD=27.82;ReadPosRankSum=-2.171;VQSLOD=2.5910;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,1:7:0.66:0,1,2	0/0:3,0:3:9.03:0,9,126	0/0:76,0:24:37.61:0,38,553	0/0:98,1:45:43.07:0,43,680	0/0:16,0:15:33.11:0,33,457	0/0:17,0:17:36.59:0,37,503	0/0:21,0:21:60.20:0,60,833	./.	0/0:11,0:11:27.06:0,27,357	0/0:14,0:13:39.13:0,39,543	0/0:8,0:8:21.07:0,21,292	0/0:10,0:10:24.08:0,24,326	0/0:7,0:7:21.07:0,21,294	0/0:20,0:20:44.78:0,45,626	0/0:29,0:29:87.29:0,87,1217	./.	0/0:17,0:17:51.17:0,51,712	0/0:7,0:6:14.97:0,15,160	0/0:16,0:15:45.07:0,45,556	0/0:15,0:15:42.14:0,42,584	0/0:32,0:32:84.27:0,84,1147	0/0:7,0:7:18.06:0,18,251	0/0:18,0:18:48.15:0,48,651	0/0:22,0:22:54.18:0,54,743	0/0:10,0:10:30.10:0,30,417	1/1:6,5:11:24.32:398,24,0	0/0:15,0:15:42.14:0,42,587	./.
chr10	97721687	.	GA	G	343.93	PASS	AB=0.775;AC=4;AF=0.080;AN=50;BaseQRankSum=6.738;DP=484;FS=3.543;HRun=1;HaplotypeScore=97.2478;InbreedingCoeff=0.3868;MQ=73.67;MQ0=9;MQRankSum=-3.290;QD=12.74;ReadPosRankSum=-0.022;VQSLOD=2.3456;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,6:9:4.28:81,4,0	0/0:5,0:5:15.05:0,15,233	0/0:53,1:21:54.18:0,54,822	0/0:83,0:50:11.94:0,12,942	0/0:22,0:22:51.16:0,51,783	0/0:16,0:16:42.14:0,42,671	0/0:21,0:21:60.20:0,60,951	./.	0/0:13,0:13:33.11:0,33,527	0/0:10,0:9:27.09:0,27,431	0/0:8,0:8:24.08:0,24,382	0/0:7,0:7:18.06:0,18,288	0/0:7,0:7:21.07:0,21,336	0/0:20,0:20:51.12:0,51,815	0/0:30,0:30:90.31:0,90,1436	./.	0/0:19,0:19:57.19:0,57,901	0/1:7,0:6:7.86:21,0,8	0/0:12,0:11:33.11:0,33,520	0/0:17,0:17:47.84:0,48,760	0/0:35,0:35:96.33:0,96,1525	0/0:8,0:8:24.07:0,24,361	0/0:18,0:18:51.13:0,51,785	0/0:22,0:22:48.16:0,48,767	0/0:11,0:11:33.11:0,33,527	0/1:2,9:11:35.80:344,0,36	0/0:16,0:16:45.15:0,45,717	./.
chr10	97721780	.	A	AT	357.55	PASS	AC=2;AF=0.040;AN=50;BaseQRankSum=-1.132;DP=373;FS=6.448;HRun=6;HaplotypeScore=58.2390;InbreedingCoeff=0.8110;MQ=61.15;MQ0=3;MQRankSum=0.282;QD=25.54;ReadPosRankSum=-0.694;VQSLOD=3.1792;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.16:0,72,734	0/0:3,0:3:3:0,3,31	0/0:13,0:8:16.99:0,17,145	0/0:7,0:6:12.02:0,12,122	0/0:13,0:13:39.07:0,39,388	0/0:20,0:19:45.10:0,45,459	0/0:20,0:20:54.12:0,54,551	./.	0/0:13,0:13:36.08:0,36,367	0/0:14,0:14:24.05:0,24,245	0/0:14,0:14:36.08:0,36,367	0/0:12,0:12:36.08:0,36,366	0/0:8,0:8:21.04:0,21,212	0/0:18,0:18:48.08:0,48,481	0/0:19,0:19:51.11:0,51,519	./.	0/0:29,0:28:75.17:0,75,763	1/1:1,13:14:36.11:451,36,0	0/0:22,0:18:48.10:0,48,484	0/0:14,0:14:42.10:0,42,428	0/0:13,0:13:33.07:0,33,337	0/0:8,0:8:24.05:0,24,245	0/0:12,0:12:33.07:0,33,336	0/0:8,0:8:21.05:0,21,214	0/0:26,0:26:72.12:0,72,723	0/0:11,0:11:33.07:0,33,337	0/0:13,0:13:36.08:0,36,366	./.
chr10	97724852	.	G	GAA	1385.92	PASS	AB=0.853;AC=7;AF=0.125;AN=56;BaseQRankSum=-2.462;DP=490;FS=7.269;HRun=10;HaplotypeScore=66.2057;InbreedingCoeff=0.6200;MQ=64.76;MQ0=0;MQRankSum=1.025;QD=17.11;ReadPosRankSum=-0.438;VQSLOD=1.7795;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:28:63.21:923,63,0	0/0:4,0:4:9:0,9,85	0/1:6,0:6:0.03:0,0,66	0/1:9,0:9:5.94:6,0,138	0/0:20,0:21:62.87:0,63,621	0/0:16,0:17:41.80:0,42,408	0/0:9,0:9:24.02:0,24,236	0/0:3,0:26:55.37:0,55,239	0/0:24,0:24:69.08:0,69,681	0/0:32,0:33:68.84:0,69,737	0/0:23,0:24:56.81:0,57,560	0/0:13,0:13:30.02:0,30,305	0/0:15,0:15:36.06:0,36,366	0/0:9,0:9:14.99:0,15,152	0/0:15,0:15:33.04:0,33,334	0/1:3,0:14:5.05:53,0,5	0/0:15,0:16:47.82:0,48,461	0/0:10,0:10:27.04:0,27,274	0/0:20,0:20:54.05:0,54,539	0/0:31,0:33:50.47:0,50,612	0/0:19,0:19:54.04:0,54,529	0/0:18,0:18:45.07:0,45,457	0/0:18,0:18:35.98:0,36,357	0/0:14,0:16:26.50:0,26,379	0/0:15,0:15:33.03:0,33,336	1/1:8,15:24:18.01:534,18,0	0/0:23,0:23:31.30:0,31,465	0/0:3,0:11:21.92:0,22,95
chr10	97725733	.	GAAAT	G	5001.04	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.103;DP=678;FS=5.338;HRun=0;HaplotypeScore=111.1646;InbreedingCoeff=0.9950;MQ=88.96;MQ0=0;MQRankSum=-8.484;QD=45.88;ReadPosRankSum=1.674;VQSLOD=5.5264;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:34:78.27:1434,78,0	0/0:8,0:8:21.07:0,21,560	0/0:22,0:22:53.67:0,54,1296	0/0:32,0:33:82.56:0,83,2022	0/0:31,0:31:87.30:0,87,2316	0/0:15,0:15:42.14:0,42,1087	0/0:25,0:25:69.22:0,69,1727	1/1:3,25:28:72.25:1328,72,0	0/0:30,0:30:90.31:0,90,2363	0/0:28,0:28:84.29:0,84,2175	0/0:11,0:11:30.10:0,30,797	0/0:22,0:22:63.22:0,63,1667	0/0:22,0:22:57.20:0,57,1513	0/0:18,0:18:51.16:0,51,1249	0/0:31,0:31:93.31:0,93,2368	1/1:3,28:31:78.27:1455,78,0	0/0:34,0:34:99:0,99,2567	1/1:0,10:10:27.09:504,27,0	0/0:17,0:17:48.15:0,48,1224	0/0:32,0:32:90.30:0,90,2345	0/0:41,0:41:99:0,120,3166	0/0:24,0:24:63.22:0,63,1678	0/0:23,0:23:66.23:0,66,1759	0/0:38,0:38:99:0,99,2593	0/0:17,0:17:48.16:0,48,1280	0/0:22,0:22:63.21:0,63,1624	0/0:25,0:25:69.22:0,69,1762	1/1:0,6:6:15.05:280,15,0
chr10	97725850	.	T	TACAC	1477.82	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-2.019;DP=593;FS=2.498;HRun=0;HaplotypeScore=98.4185;InbreedingCoeff=0.9423;MQ=63.53;MQ0=5;MQRankSum=-4.869;QD=21.11;ReadPosRankSum=-0.346;VQSLOD=3.4152;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:24:17.90:315,18,0	0/0:11,0:11:27.09:0,27,449	0/0:29,0:17:33.11:0,33,518	0/0:32,0:24:38.76:0,39,510	0/0:19,0:19:51.16:0,51,826	0/0:15,0:15:33.03:0,33,522	0/0:26,0:28:51.11:0,51,769	1/1:6,1:10:14.70:152,15,0	0/0:16,0:16:42.13:0,42,678	0/0:32,0:33:72.13:0,72,1048	0/0:28,0:28:72.02:0,72,1127	0/0:19,0:19:42.08:0,42,648	0/0:17,0:16:45.13:0,45,728	0/0:15,0:15:36.12:0,36,604	0/0:22,0:22:57.19:0,57,949	1/1:2,19:22:36.12:891,36,0	0/0:29,0:29:53.76:0,54,1087	1/1:4,0:8:5.05:59,5,0	0/0:14,0:13:12.04:0,12,196	0/0:29,0:29:69.22:0,69,1117	0/0:40,0:42:90.07:0,90,1377	0/0:23,0:23:57.13:0,57,843	0/0:19,0:19:42.11:0,42,644	0/0:29,0:29:75.32:0,75,1132	0/0:18,0:18:42.13:0,42,679	0/0:22,0:22:54.12:0,54,831	0/0:14,0:14:36.12:0,36,603	1/1:1,3:4:9.03:223,9,0
chr10	97728926	.	CTTTTCT	C	503.97	PASS	AB=0.767;AC=2;AF=0.036;AN=56;BaseQRankSum=5.360;DP=556;FS=2.571;HRun=0;HaplotypeScore=108.2926;InbreedingCoeff=-0.0486;MQ=66.91;MQ0=5;MQRankSum=-2.709;QD=15.27;ReadPosRankSum=1.187;VQSLOD=2.9308;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:29:20.94:0,21,470	0/0:6,0:6:18.06:0,18,577	0/0:45,0:21:6.80:0,7,131	0/0:49,0:21:3.05:0,3,42	0/0:23,0:23:51.16:0,51,1521	0/0:25,0:25:42.14:0,42,1281	0/0:8,0:8:15.04:0,15,407	0/0:29,0:28:51.17:0,51,1249	0/0:14,0:14:27.09:0,27,883	0/0:22,0:22:54.19:0,54,1754	0/0:23,0:23:54.19:0,54,1575	0/0:15,0:15:24.08:0,24,728	0/0:8,0:8:21.07:0,21,630	0/0:15,0:13:33.11:0,33,1011	0/0:11,0:11:27.09:0,27,885	0/1:11,0:13:77.83:78,0,126	0/0:22,0:22:51.46:0,51,1544	0/0:26,0:26:31.31:0,31,817	0/0:15,0:14:24.08:0,24,691	0/0:18,0:18:42.14:0,42,1294	0/0:10,0:10:18.06:0,18,496	0/0:15,0:15:33.11:0,33,992	0/0:15,0:15:30.10:0,30,982	0/0:16,0:14:36.12:0,36,1051	0/0:24,0:24:54.19:0,54,1664	0/1:10,10:20:63.77:515,0,64	0/0:21,0:21:45.15:0,45,1366	0/0:12,0:12:30.10:0,30,862
chr10	97728958	.	CTTCTTT	C	540.22	PASS	AB=0.867;AC=6;AF=0.107;AN=56;BaseQRankSum=5.414;DP=497;FS=0.000;HRun=0;HaplotypeScore=93.8097;InbreedingCoeff=0.4935;MQ=54.57;MQ0=8;MQRankSum=-5.053;QD=5.87;ReadPosRankSum=0.878;VQSLOD=1.7572;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:24:3.01:64,3,0	0/0:10,0:10:24.08:0,24,778	0/0:37,0:10:11.93:0,12,263	0/1:38,0:10:8.32:8,0,173	0/0:23,0:23:60.20:0,60,1858	0/0:20,0:20:45.15:0,45,1254	0/0:7,0:7:9.03:0,9,254	0/0:26,0:26:44.90:0,45,394	0/0:13,0:13:27.09:0,27,759	0/0:22,0:22:57.19:0,57,1595	0/0:22,0:22:48.16:0,48,1317	0/0:13,0:13:30.10:0,30,797	0/0:9,0:9:24.07:0,24,655	0/0:13,0:11:27.06:0,27,619	0/0:13,0:13:33.10:0,33,903	0/1:7,4:11:73.53:394,0,74	0/0:26,0:26:49.98:0,50,1437	1/1:7,12:19:9.03:191,9,0	0/0:17,0:15:30.08:0,30,621	0/0:24,0:24:57.18:0,57,1587	0/0:6,0:6:12.03:0,12,298	0/0:14,0:14:39.13:0,39,1103	0/0:15,0:15:39.13:0,39,1100	0/0:16,0:14:27.09:0,27,734	0/0:23,0:23:63.17:0,63,1833	0/0:15,0:15:29.71:0,30,469	0/0:14,0:14:30.10:0,30,833	0/0:7,0:7:14.90:0,15,110
chr10	97728976	.	TTTC	T	747.73	PASS	AB=0.994;AC=9;AF=0.161;AN=56;BaseQRankSum=7.411;DP=499;FS=31.109;HRun=0;HaplotypeScore=64.4950;InbreedingCoeff=0.5273;MQ=52.75;MQ0=15;MQRankSum=-5.916;QD=5.50;ReadPosRankSum=1.074;VQSLOD=0.6624;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:2.84:14,3,0	0/0:12,0:12:36.11:0,36,709	0/0:39,0:9:20.83:0,21,343	0/1:56,1:15:26.65:27,0,217	0/0:23,0:23:66.23:0,66,1337	0/0:19,0:19:48.10:0,48,903	0/0:7,0:7:21.07:0,21,447	1/1:5,17:19:39.13:597,39,0	0/0:12,0:12:36.08:0,36,648	0/0:21,0:21:57.18:0,57,1056	0/0:18,0:18:45.14:0,45,886	0/0:14,0:14:36.04:0,36,612	0/0:8,0:8:21.07:0,21,446	0/0:11,0:9:21.05:0,21,407	0/0:12,0:12:33.11:0,33,669	0/1:14,0:14:38.75:39,0,257	0/0:24,0:24:63.21:0,63,1244	0/1:15,0:15:33.85:34,0,65	0/0:13,0:12:27.07:0,27,429	0/0:21,0:21:57.14:0,57,1110	0/0:7,0:7:18.06:0,18,325	0/0:20,0:20:54.16:0,54,981	0/0:19,0:19:54.16:0,54,1034	0/0:12,0:10:30.03:0,30,479	0/0:26,0:26:69.24:0,69,1346	0/0:15,0:15:39.13:0,39,742	0/0:10,0:10:27.06:0,27,494	1/1:2,4:5:12.04:184,12,0
chr10	97729035	.	TCC	T	94.98	PASS	AB=0.692;AC=3;AF=0.060;AN=50;BaseQRankSum=3.817;DP=274;FS=9.169;HRun=3;HaplotypeScore=40.9187;InbreedingCoeff=0.2466;MQ=41.69;MQ0=44;MQRankSum=-2.438;QD=7.31;ReadPosRankSum=0.145;VQSLOD=-0.6384;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:10:2.81:0,3,141	0/0:7,0:7:12.03:0,12,167	./.	./.	0/0:9,0:8:21.07:0,21,344	0/0:20,0:15:36.12:0,36,637	0/0:8,0:4:1.25:0,1,3	0/0:9,0:4:9.02:0,9,116	0/0:9,0:9:24:0,24,340	0/0:13,0:10:24.05:0,24,360	0/0:7,0:6:9.03:0,9,137	0/0:10,0:9:12.97:0,13,101	./.	0/0:5,0:4:9.02:0,9,118	0/0:4,0:3:6.02:0,6,87	0/1:5,4:6:10.94:168,0,11	0/0:20,0:18:37.84:0,38,577	0/0:11,0:10:22.59:0,23,280	0/0:8,0:3:9.03:0,9,126	0/0:13,0:11:27.56:0,28,483	0/0:17,0:13:24.07:0,24,382	0/0:10,0:9:11.89:0,12,134	0/0:9,0:8:15.94:0,16,261	0/0:10,0:7:12.04:0,12,190	0/0:8,0:7:15.05:0,15,248	0/0:13,0:10:23.91:0,24,361	0/0:6,0:6:10.77:0,11,165	1/1:4,0:1:0.47:1,0,0
chr10	97729076	.	CCCT	C	515.86	PASS	AB=0.799;AC=12;AF=0.222;AN=54;BaseQRankSum=6.986;DP=428;FS=5.465;HRun=0;HaplotypeScore=45.6331;InbreedingCoeff=-0.1671;MQ=32.86;MQ0=89;MQRankSum=-2.285;QD=5.26;ReadPosRankSum=2.890;VQSLOD=0.8566;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,8:12:87.63:88,0,124	0/1:2,1:3:26.82:27,0,77	0/0:87,0:15:39.88:0,40,508	0/0:112,0:8:21.07:0,21,296	0/1:6,1:7:54.04:54,0,131	0/0:16,4:17:7.72:0,8,567	0/0:14,2:15:20.58:0,21,422	0/0:8,0:5:13.09:0,13,80	0/1:5,1:6:16.25:16,0,101	0/1:13,2:13:5.71:6,0,460	0/1:8,1:8:12.67:13,0,164	0/0:5,1:4:3.01:0,3,43	./.	0/0:5,1:3:9.03:0,9,129	1/1:2,1:2:3.01:30,3,0	0/1:5,5:7:99:125,0,109	0/1:7,7:12:99:143,0,121	0/1:6,4:9:75.80:146,0,76	0/0:11,0:8:18.01:0,18,237	0/0:11,0:11:33.11:0,33,606	0/0:13,0:7:21.07:0,21,348	0/0:5,1:4:9.03:0,9,129	0/0:7,1:7:19.24:0,19,279	0/0:8,2:8:7.25:0,7,88	0/0:4,0:4:9.92:0,10,156	0/0:8,0:7:20.74:0,21,292	0/1:4,0:4:9.08:9,0,114	0/0:3,0:1:2.92:0,3,17
chr10	97729085	.	T	TA	113.95	PASS	AB=0.643;AC=1;AF=0.019;AN=54;BaseQRankSum=2.225;DP=429;FS=21.812;HRun=0;HaplotypeScore=40.7438;InbreedingCoeff=-0.0565;MQ=32.80;MQ0=85;MQRankSum=-2.047;QD=12.66;ReadPosRankSum=0.075;VQSLOD=1.6729;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:14:26.90:0,27,301	0/0:4,0:3:9.03:0,9,130	0/0:87,0:15:42.08:0,42,520	0/0:112,0:8:20.70:0,21,279	0/0:9,0:9:23.93:0,24,246	0/0:20,0:17:36.10:0,36,477	0/0:14,0:15:18.69:0,19,564	0/1:4,5:6:23.95:188,0,24	0/0:5,0:4:9.03:0,9,125	0/0:15,0:14:36.57:0,37,486	0/0:10,0:9:21.05:0,21,269	0/0:5,0:4:3.01:0,3,42	./.	0/0:5,0:3:9.03:0,9,126	0/0:3,0:2:2.99:0,3,24	0/0:11,0:8:20.99:0,21,249	0/0:13,0:13:18.25:0,18,295	0/0:10,0:9:27.01:0,27,315	0/0:13,0:9:18.06:0,18,248	0/0:12,0:12:36.12:0,36,489	0/0:12,0:7:21.07:0,21,288	0/0:6,0:4:9.03:0,9,126	0/0:7,0:6:15.05:0,15,209	0/0:10,0:8:3.20:0,3,79	0/0:4,0:4:9.03:0,9,126	0/0:8,0:7:21.07:0,21,288	0/0:3,0:3:9.03:0,9,126	0/0:2,0:1:3.01:0,3,33
chr10	97729196	.	TA	T	3406.44	PASS	AB=0.966;AC=51;AF=0.944;AN=54;BaseQRankSum=-3.859;DP=204;FS=4.761;HRun=1;HaplotypeScore=62.9629;InbreedingCoeff=0.3740;MQ=91.75;MQ0=6;MQRankSum=-4.905;QD=19.92;ReadPosRankSum=0.965;VQSLOD=3.8162;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,6:7:18.01:216,18,0	1/1:0,2:2:6.02:84,6,0	0/0:31,2:15:19.87:0,20,335	0/1:55,1:21:3.84:4,0,212	1/1:0,3:2:3.01:42,3,0	1/1:0,9:9:18.06:251,18,0	1/1:0,10:6:12.04:167,12,0	1/1:3,4:4:11.97:122,12,0	1/1:0,2:2:5.97:61,6,0	1/1:0,3:3:9.03:126,9,0	1/1:0,5:4:9.03:125,9,0	1/1:0,8:5:15.05:209,15,0	1/1:0,2:2:6.02:84,6,0	1/1:0,6:6:14.95:164,15,0	1/1:0,6:6:18.06:251,18,0	1/1:0,6:6:15.02:188,15,0	1/1:0,4:4:12.04:167,12,0	1/1:0,2:2:6.02:84,6,0	1/1:0,2:2:6.02:84,6,0	1/1:0,5:5:15.05:209,15,0	./.	1/1:0,6:6:15.05:209,15,0	1/1:0,4:3:3.22:79,3,0	1/1:1,2:3:0.47:1,0,0	1/1:0,4:4:11.99:144,12,0	1/1:0,3:3:9.03:126,9,0	1/1:0,3:3:9.03:126,9,0	1/1:0,2:2:6.02:84,6,0
chr10	97729204	.	TA	T	4747.08	PASS	AB=0.740;AC=47;AF=0.870;AN=54;BaseQRankSum=-1.236;DP=288;FS=21.609;HRun=1;HaplotypeScore=79.9786;InbreedingCoeff=0.0792;MQ=84.03;MQ0=13;MQRankSum=-3.672;QD=19.70;ReadPosRankSum=2.104;VQSLOD=3.7848;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:10:24.03:313,24,0	1/1:0,2:2:6.02:84,6,0	0/0:40,7:19:23.30:0,23,361	0/1:69,5:25:72.77:73,0,302	1/1:0,3:2:3.01:42,3,0	1/1:0,12:12:27.09:376,27,0	0/1:1,10:7:32.81:152,0,33	0/1:9,2:8:49.28:49,0,263	1/1:1,4:5:12.03:150,12,0	1/1:0,5:5:15.05:209,15,0	1/1:1,7:7:21.07:287,21,0	1/1:0,8:5:15.05:209,15,0	1/1:0,2:2:6.02:84,6,0	1/1:0,7:7:18.06:251,18,0	1/1:1,7:8:24.08:331,24,0	1/1:0,11:11:30.10:417,30,0	1/1:0,7:7:15.04:209,15,0	1/1:0,4:4:5.99:84,6,0	0/1:7,4:8:99:147,0,122	1/1:0,8:8:24.08:334,24,0	./.	1/1:0,8:8:21.07:292,21,0	1/1:0,4:3:8.92:100,9,0	1/1:0,3:3:2.92:17,3,0	1/1:0,5:5:15.05:209,15,0	1/1:1,4:4:12.04:167,12,0	1/1:0,3:3:9.03:126,9,0	0/1:1,1:2:35.88:36,0,42
chr10	97729225	.	TA	T	8483.38	PASS	AB=0.736;AC=48;AF=0.889;AN=54;BaseQRankSum=-4.546;DP=426;FS=25.378;HRun=1;HaplotypeScore=85.8911;InbreedingCoeff=-0.1370;MQ=71.65;MQ0=20;MQRankSum=-1.412;QD=20.06;ReadPosRankSum=4.954;VQSLOD=3.6411;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:33.11:460,33,0	1/1:0,2:2:6.02:84,6,0	0/1:53,5:19:39.76:76,0,40	0/1:94,9:37:99:107,0,561	1/1:0,9:8:21.07:293,21,0	1/1:2,13:15:36.11:485,36,0	0/1:1,15:12:17.65:347,0,18	0/1:11,12:19:99:363,0,278	1/1:0,8:8:24.08:335,24,0	1/1:0,8:8:24.06:317,24,0	1/1:0,11:10:30.10:419,30,0	1/1:0,12:9:21.07:293,21,0	1/1:0,5:5:12.04:165,12,0	1/1:0,11:11:30.10:419,30,0	1/1:0,11:11:33.11:461,33,0	1/1:0,17:17:45.15:627,45,0	1/1:0,12:12:33.11:461,33,0	1/1:0,9:9:24.08:336,24,0	0/1:11,6:11:99:233,0,153	1/1:0,12:12:36.12:503,36,0	./.	1/1:0,12:12:30.10:419,30,0	1/1:0,10:9:27.09:365,27,0	1/1:0,5:5:9.03:126,9,0	1/1:0,7:7:21.07:293,21,0	1/1:1,9:9:24.08:335,24,0	1/1:0,3:3:9.03:126,9,0	0/1:1,1:2:35.88:36,0,42
chr10	97729822	.	GCA	G	689.26	PASS	AB=0.866;AC=16;AF=0.286;AN=56;BaseQRankSum=9.346;DP=694;FS=1.071;HRun=0;HaplotypeScore=97.8792;InbreedingCoeff=-0.1039;MQ=60.68;MQ0=8;MQRankSum=-1.804;QD=1.97;ReadPosRankSum=0.557;VQSLOD=1.6915;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:40:38.40:0,38,1128	0/0:10,0:9:21.07:0,21,324	0/0:31,1:12:3:0,3,27	0/0:52,0:22:3.48:0,3,43	0/1:12,3:15:50.32:50,0,286	0/0:21,1:22:10.46:0,10,569	0/1:36,3:38:0.22:0,0,851	0/1:10,0:18:22.40:155,0,22	0/1:8,2:11:62.35:62,0,159	0/1:15,7:23:99:146,0,323	0/0:23,0:23:36.12:0,36,550	0/0:20,0:21:25.02:0,25,542	0/1:16,3:19:64.55:65,0,398	0/1:28,4:32:34.13:34,0,818	0/0:16,0:16:26.98:0,27,300	0/1:16,3:19:39.22:39,0,317	0/1:37,4:41:42.28:42,0,1012	0/0:7,0:17:17.81:0,18,131	0/0:21,0:20:11.53:0,12,216	0/1:18,0:17:16.53:17,0,277	0/1:63,3:65:5.45:5,0,1640	0/0:21,1:22:1.45:0,1,452	0/0:13,0:13:12.01:0,12,143	0/0:29,2:35:0.69:0,1,669	0/0:18,0:17:24.08:0,24,373	1/1:12,0:23:7.89:81,8,0	0/1:13,0:14:3.68:4,0,293	1/1:2,4:8:17.05:143,17,0
chr10	97730124	.	CT	C	2978.75	PASS	AB=0.552;AC=11;AF=0.196;AN=56;BaseQRankSum=6.292;DP=772;FS=8.803;HRun=3;HaplotypeScore=56.4124;InbreedingCoeff=0.9237;MQ=50.71;MQ0=137;MQRankSum=-2.871;QD=18.62;ReadPosRankSum=0.971;VQSLOD=2.6070;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,25:28:37.61:575,38,0	0/0:10,0:8:24.08:0,24,331	0/0:23,0:13:33.02:0,33,387	0/0:15,0:13:14.30:0,14,313	0/0:37,0:25:51.13:0,51,683	0/0:24,0:16:45.14:0,45,606	0/0:37,0:26:74.68:0,75,956	1/1:5,23:24:66.21:815,66,0	0/0:20,0:18:45.13:0,45,597	0/0:45,0:24:61.08:0,61,812	0/0:29,0:15:42.14:0,42,580	0/0:28,0:23:54.04:0,54,677	0/0:23,0:19:54.18:0,54,746	0/0:21,0:20:57.18:0,57,769	0/0:18,0:18:45.10:0,45,611	0/1:3,13:14:2.39:406,0,2	0/0:49,1:33:32.22:0,32,869	1/1:10,9:14:30.09:370,30,0	0/0:29,0:24:72.23:0,72,966	0/0:33,0:13:30.10:0,30,414	0/0:24,0:20:51.17:0,51,700	0/0:35,0:16:45.15:0,45,620	0/0:31,0:20:46.84:0,47,673	0/0:44,0:34:87.13:0,87,1183	0/0:17,0:15:39.11:0,39,521	1/1:23,11:22:33.02:370,33,0	0/0:18,1:10:18.06:0,18,248	1/1:10,21:24:51.16:621,51,0
chr10	97730236	.	CTCCTT	C	203.18	PASS	AB=0.957;AC=10;AF=0.179;AN=56;BaseQRankSum=3.867;DP=639;FS=10.840;HRun=0;HaplotypeScore=53.8412;InbreedingCoeff=-0.1026;MQ=18.93;MQ0=300;MQRankSum=-1.572;QD=0.92;ReadPosRankSum=-2.250;VQSLOD=-0.2047;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:10:10.63:0,11,189	0/0:6,0:3:9:0,9,116	1/1:1,0:1:1.82:5,2,0	0/0:1,0:1:3:0,3,25	0/0:25,0:10:15.50:0,16,171	0/1:24,0:8:2.81:3,0,212	0/1:34,1:10:25.42:25,0,364	0/0:22,0:5:12.49:0,12,142	0/0:17,0:6:14.97:0,15,256	0/1:28,0:12:82.73:83,0,201	0/1:27,0:11:99:99,0,221	0/0:16,0:5:9.03:0,9,168	0/0:19,0:5:12.04:0,12,200	0/1:17,0:5:44.44:71,0,44	0/0:18,0:8:18.05:0,18,299	0/0:31,0:14:32.86:0,33,432	0/0:30,0:6:9:0,9,103	0/0:19,0:2:6.02:0,6,91	0/0:21,0:3:6.02:0,6,114	0/1:19,4:18:4.56:5,0,431	0/0:42,0:8:9.45:0,9,112	0/1:33,3:15:19.20:19,0,215	0/1:26,3:10:19.92:20,0,129	0/0:34,0:5:8.98:0,9,113	0/0:25,2:11:21.07:0,21,348	0/0:25,0:7:15.05:0,15,247	0/0:10,0:4:7.72:0,8,138	0/0:19,0:4:2.04:0,2,6
chr10	97730246	.	TTC	T	196.78	PASS	AB=0.958;AC=13;AF=0.232;AN=56;BaseQRankSum=4.373;DP=593;FS=16.476;HRun=0;HaplotypeScore=42.2928;InbreedingCoeff=-0.0944;MQ=18.75;MQ0=286;MQRankSum=-1.340;QD=0.82;ReadPosRankSum=0.211;VQSLOD=-0.1186;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:8:9.03:0,9,106	0/1:6,0:3:3.15:3,0,67	0/0:4,0:1:2.74:0,3,12	0/0:3,0:1:3.01:0,3,49	0/0:18,3:9:3.01:0,3,56	0/1:23,1:7:27.74:28,0,138	0/1:30,0:10:1.33:1,0,243	0/0:22,0:5:13.07:0,13,126	0/0:15,0:5:12.04:0,12,206	0/1:29,0:9:99:110,0,161	0/0:25,2:10:0.46:0,0,132	0/0:15,0:5:8.06:0,8,83	0/0:18,0:5:11.01:0,11,102	1/1:14,0:4:4.23:25,4,0	0/0:17,0:8:5.87:0,6,197	0/1:27,0:9:12.66:13,0,85	0/0:27,0:6:5.51:0,6,47	0/0:16,0:2:5.81:0,6,35	0/0:26,0:3:6.02:0,6,78	0/1:17,4:16:53.95:54,0,226	0/0:38,0:7:2.22:0,2,37	0/1:30,1:12:15.58:38,0,16	1/1:24,0:8:3.76:21,4,0	0/0:29,1:4:3.01:0,3,39	0/0:23,1:12:2.12:0,2,216	0/1:25,1:8:29.76:30,0,83	0/1:7,1:3:4.85:5,0,100	0/0:14,1:4:0:0,0,0
chr10	97730247	.	TCTC	T	174.23	PASS	AB=0.824;AC=11;AF=0.239;AN=46;BaseQRankSum=0.359;DP=589;FS=0.000;HRun=0;HaplotypeScore=45.9093;InbreedingCoeff=0.3565;MQ=21.56;MQ0=280;MQRankSum=-2.171;QD=1.43;ReadPosRankSum=-0.734;VQSLOD=0.9605;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:8:1.97:0,2,15	0/0:5,0:3:2.98:0,3,22	./.	0/0:3,0:1:3.01:0,3,41	0/0:20,0:9:3.01:0,3,47	0/0:24,0:7:6.02:0,6,110	0/0:29,0:9:6.02:0,6,94	1/1:21,0:5:6.02:73,6,0	0/0:15,0:5:9.03:0,9,168	0/0:29,0:10:11.87:0,12,127	0/0:26,0:10:7.84:0,8,93	1/1:12,3:5:3.01:33,3,0	1/1:16,2:5:3.01:32,3,0	0/1:10,3:4:5.72:35,0,6	0/0:16,0:8:6.02:0,6,99	0/0:26,0:9:2.96:0,3,19	./.	./.	./.	0/0:20,0:17:6.02:0,6,99	0/0:39,0:7:1.25:0,1,3	1/1:27,3:11:6.02:81,6,0	1/1:22,1:8:5.05:47,5,0	./.	0/0:24,0:12:3.01:0,3,35	0/0:24,0:8:3.01:0,3,30	0/0:8,0:3:6.02:0,6,108	0/0:15,0:5:2.97:0,3,20
chr10	97730279	.	TTCATC	T	53.52	PASS	AB=0.899;AC=10;AF=0.217;AN=46;BaseQRankSum=3.052;DP=141;FS=3.052;HRun=0;HaplotypeScore=30.0194;InbreedingCoeff=0.0546;MQ=46.17;MQ0=32;MQRankSum=-2.559;QD=1.49;ReadPosRankSum=-0.096;VQSLOD=0.8641;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:5.91:0,6,38	1/1:0,1:1:0.89:2,1,0	0/0:13,0:3:6.01:0,6,83	0/0:7,0:2:5.75:0,6,62	0/0:6,1:4:2.54:0,3,75	0/0:6,0:3:8.99:0,9,136	0/0:7,0:4:9.03:0,9,208	0/1:3,0:2:22.08:22,0,23	0/0:5,0:4:9.03:0,9,189	0/1:7,1:6:44.89:45,0,307	0/1:6,1:6:23.25:23,0,92	0/0:8,0:5:5.85:0,6,50	0/0:3,0:2:3:0,3,29	0/0:6,0:4:3.48:0,3,30	0/0:1,1:2:5.51:0,6,84	./.	./.	./.	0/0:6,0:3:4.22:0,4,62	0/0:5,0:5:11.13:0,11,123	1/1:10,0:4:3.01:31,3,0	0/0:8,0:5:11.09:0,11,66	0/1:4,1:3:19.97:20,0,23	./.	0/0:1,0:1:2.96:0,3,19	./.	0/0:3,0:2:6.02:0,6,144	1/1:2,0:2:3:27,3,0
chr10	97730399	.	TTC	T	115.70	PASS	AB=0.957;AC=4;AF=0.077;AN=52;BaseQRankSum=3.348;DP=992;FS=14.163;HRun=0;HaplotypeScore=57.0312;InbreedingCoeff=0.1840;MQ=14.82;MQ0=509;MQRankSum=-0.839;QD=0.80;ReadPosRankSum=2.726;VQSLOD=0.2324;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:66,5:23:99:170,0,178	0/0:15,0:6:9.03:0,9,111	./.	./.	0/0:32,0:15:24.22:0,24,290	0/0:30,0:7:18.06:0,18,218	0/0:93,0:3:4.83:0,5,58	0/0:33,0:1:3.01:0,3,37	0/0:21,0:2:5.98:0,6,72	0/0:67,0:9:21.06:0,21,255	0/0:38,0:7:16.28:0,16,160	0/0:20,0:3:5.93:0,6,50	0/0:25,0:3:6.02:0,6,74	0/0:30,0:6:12.04:0,12,160	0/0:18,0:5:15.04:0,15,192	1/1:27,0:7:6.94:23,7,0	0/0:61,0:7:12.04:0,12,177	0/1:46,1:10:25.29:25,0,151	0/0:41,0:3:6.02:0,6,92	0/0:30,0:17:36.57:0,37,467	0/0:36,0:5:5.97:0,6,73	0/0:35,0:15:33.06:0,33,399	0/0:29,0:16:27.58:0,28,307	0/0:82,0:16:13.94:0,14,291	0/0:24,0:10:24.07:0,24,311	0/0:30,0:9:14.66:0,15,194	0/0:33,0:11:12.04:0,12,169	0/0:24,0:5:9.03:0,9,111
chr10	97731388	.	CTTT	C	1785.36	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.280;DP=631;FS=2.990;HRun=3;HaplotypeScore=92.1427;InbreedingCoeff=0.9993;MQ=80.45;MQ0=0;MQRankSum=-9.770;QD=46.98;ReadPosRankSum=-1.456;VQSLOD=2.9307;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.20:0,57,1394	0/0:19,0:19:57.20:0,57,1393	0/0:23,0:23:69.22:0,69,1532	0/0:11,0:11:30.10:0,30,728	0/0:26,0:26:75.23:0,75,1728	0/0:27,0:27:81.26:0,81,1898	0/0:17,0:17:51.18:0,51,1248	1/1:2,26:28:84.24:1433,84,0	0/0:25,0:25:75.20:0,75,1709	0/0:44,0:43:99:0,132,3199	0/0:24,0:24:72.25:0,72,1748	0/0:19,0:19:57.20:0,57,1405	0/0:14,0:14:42.14:0,42,1013	0/0:25,0:25:75.24:0,75,1753	0/0:25,0:25:75.25:0,75,1739	0/0:30,0:30:90.30:0,90,2172	0/0:23,0:23:69.24:0,69,1649	0/0:16,0:16:48.16:0,48,1161	0/0:18,0:18:54.16:0,54,1235	0/0:40,0:40:99:0,120,2933	0/0:25,0:25:75.26:0,75,1823	0/0:14,0:14:42.14:0,42,1004	0/0:27,0:27:75.26:0,75,1826	0/0:11,0:11:33.11:0,33,813	0/0:17,0:17:51.18:0,51,1257	0/0:29,0:29:84.29:0,84,2070	0/0:25,0:25:75.25:0,75,1797	1/1:2,8:10:30.02:474,30,0
chr10	97731394	.	CT	C	1332.78	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.175;DP=639;FS=5.054;HRun=1;HaplotypeScore=67.2967;InbreedingCoeff=0.9996;MQ=82.07;MQ0=0;MQRankSum=-10.021;QD=36.02;ReadPosRankSum=-1.008;VQSLOD=3.3304;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.18:0,54,863	0/0:18,0:18:54.18:0,54,864	0/0:24,0:24:68.41:0,68,989	0/0:13,0:13:36.10:0,36,549	0/0:23,0:23:66.23:0,66,1055	0/0:27,0:27:81.28:0,81,1295	0/0:18,0:18:54.17:0,54,839	1/1:0,27:27:81.27:1068,81,0	0/0:25,0:25:75.24:0,75,1175	0/0:46,0:45:99:0,135,2158	0/0:27,0:27:81.25:0,81,1249	0/0:20,0:20:60.18:0,60,913	0/0:19,0:19:57.19:0,57,891	0/0:25,0:25:75.26:0,75,1199	0/0:22,0:22:66.21:0,66,1031	0/0:30,0:30:90.28:0,90,1392	0/0:22,0:22:66.23:0,66,1055	0/0:16,0:16:48.14:0,48,734	0/0:16,0:16:48.16:0,48,768	0/0:40,0:40:99:0,120,1916	0/0:26,0:26:78.27:0,78,1241	0/0:14,0:14:42.13:0,42,648	0/0:26,0:26:78.25:0,78,1224	0/0:12,0:12:36.12:0,36,576	0/0:19,0:19:57.17:0,57,885	0/0:29,0:29:87.30:0,87,1391	0/0:27,0:27:81.28:0,81,1295	1/1:0,10:10:30.10:387,30,0
chr10	97732613	.	CCTATCTAT	C	1526.59	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=3.861;DP=676;FS=5.277;HRun=0;HaplotypeScore=173.7594;InbreedingCoeff=0.7347;MQ=68.48;MQ0=6;MQRankSum=-5.370;QD=21.81;ReadPosRankSum=-0.678;VQSLOD=2.8808;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,16:36:30.10:662,30,0	0/0:6,0:6:6.02:0,6,169	./.	./.	0/0:29,0:29:35.29:0,35,1380	0/0:24,0:24:36.12:0,36,1385	0/0:21,0:21:3.01:0,3,104	0/0:50,0:50:0:0,0,0	0/0:26,0:26:27.09:0,27,1030	0/0:17,0:17:21.07:0,21,655	0/0:20,0:31:39.13:0,39,1229	0/0:14,0:16:15.04:0,15,401	0/0:14,0:19:15.03:0,15,435	0/0:15,0:23:23.98:0,24,238	0/0:35,0:35:57.18:0,57,2111	0/0:11,0:23:24.08:0,24,846	0/0:25,0:25:45.15:0,45,1448	0/0:16,0:16:33.11:0,33,1183	0/0:23,0:23:15.05:0,15,460	0/0:25,0:26:42.13:0,42,1531	0/0:23,0:24:33.10:0,33,1179	0/0:13,0:18:15.05:0,15,466	0/0:14,0:14:6.02:0,6,226	0/0:15,0:15:5.72:0,6,219	0/0:7,0:19:29.93:0,30,244	1/1:19,15:34:45.13:983,45,0	0/0:24,0:28:36.12:0,36,1251	0/0:24,0:24:30.08:0,30,1078
chr10	97734182	.	G	GT	2106.37	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=8.236;DP=462;FS=4.837;HRun=6;HaplotypeScore=76.5889;InbreedingCoeff=0.8980;MQ=62.14;MQ0=4;MQRankSum=-7.434;QD=19.15;ReadPosRankSum=0.258;VQSLOD=3.2269;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,2:18:38.95:330,39,0	0/0:5,0:5:11.80:0,12,100	1/1:13,0:5:7.31:29,7,0	0/1:6,0:2:5.63:6,0,11	0/0:26,0:26:21.63:0,22,495	0/0:13,0:13:23.97:0,24,236	0/0:17,0:17:34.20:0,34,399	1/1:20,0:20:53.96:519,54,0	0/0:18,1:19:33.40:0,33,354	0/0:21,0:21:60.14:0,60,636	0/0:16,0:16:42.05:0,42,437	0/0:16,0:16:42.10:0,42,449	0/0:16,0:16:42.08:0,42,435	0/0:14,0:14:42.09:0,42,443	0/0:16,0:16:42.02:0,42,424	0/0:22,0:21:51.06:0,51,518	0/0:16,0:16:45.07:0,45,465	1/1:22,1:23:68.95:672,69,0	0/0:17,0:17:41.44:0,41,405	0/0:22,0:22:62.95:0,63,612	0/0:17,0:17:37.88:0,38,379	0/0:16,0:16:27.34:0,27,243	0/0:16,0:16:32.55:0,33,369	0/0:7,0:7:18.05:0,18,192	0/0:27,0:27:72.36:0,72,701	1/1:22,0:22:59.98:574,60,0	0/0:13,0:13:31.32:0,31,325	1/1:8,0:8:16.78:161,17,0
chr10	97734184	.	TTTTG	T	2825.52	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=10.404;DP=461;FS=2.549;HRun=0;HaplotypeScore=95.4576;InbreedingCoeff=0.8128;MQ=62.19;MQ0=4;MQRankSum=-9.188;QD=25.69;ReadPosRankSum=0.628;VQSLOD=3.6298;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:17:44.95:663,45,0	0/0:6,0:6:11.99:0,12,192	0/1:14,0:6:6.80:7,0,11	0/1:6,0:2:8.83:9,0,36	0/0:23,0:23:54.99:0,55,1076	0/0:15,0:15:27.01:0,27,473	0/0:18,0:18:36.89:0,37,657	1/1:9,12:21:57.67:792,58,0	0/0:18,0:18:44.96:0,45,731	0/0:22,0:22:65.64:0,66,1284	0/0:16,0:16:40.34:0,40,887	0/0:16,0:16:39.02:0,39,817	0/0:16,0:16:45.07:0,45,772	0/0:14,0:14:42.10:0,42,805	0/0:16,0:16:47.70:0,48,821	0/0:22,0:21:49.26:0,49,292	0/0:16,0:16:45.06:0,45,772	1/1:23,0:23:66.80:626,67,0	0/0:17,0:17:44.73:0,45,682	0/0:21,0:21:63.18:0,63,1263	0/0:18,0:18:44.88:0,45,782	0/0:16,0:16:29.94:0,30,649	0/0:16,0:16:41.89:0,42,657	0/0:7,0:7:18.06:0,18,399	0/0:27,0:27:78.10:0,78,1548	1/1:19,2:21:59.67:668,60,0	0/0:11,0:11:33.09:0,33,668	1/1:3,5:8:20.82:239,21,0
chr10	97734185	.	TTTG	T	2728.42	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=10.427;DP=459;FS=4.614;HRun=0;HaplotypeScore=86.7037;InbreedingCoeff=0.8922;MQ=62.13;MQ0=4;MQRankSum=-6.758;QD=25.74;ReadPosRankSum=0.271;VQSLOD=2.9041;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:44.41:435,44,0	0/0:6,0:6:11.98:0,12,154	0/1:14,0:6:1.21:1,0,20	0/0:6,0:2:3.89:0,4,28	0/0:21,0:21:55.69:0,56,871	0/0:14,0:14:27:0,27,381	0/0:18,0:18:24.11:0,24,528	1/1:22,0:22:59.71:565,60,0	0/0:16,0:16:38.29:0,38,578	0/0:22,0:22:52.03:0,52,1026	0/0:16,0:16:43.37:0,43,730	0/0:16,0:16:43.59:0,44,671	0/0:16,0:16:45.07:0,45,646	0/0:14,0:14:42.10:0,42,663	0/0:16,0:16:47.24:0,47,649	0/0:23,0:22:29.93:0,30,112	0/0:16,0:16:45.04:0,45,646	1/1:8,16:24:68.51:896,69,0	0/0:18,0:18:37.57:0,38,552	0/0:21,0:21:63.18:0,63,1021	0/0:18,0:18:44.75:0,45,648	0/0:15,0:15:34.30:0,34,508	0/0:16,0:16:41.14:0,41,508	0/0:7,0:7:18.06:0,18,321	0/0:27,0:27:78.17:0,78,1243	1/1:6,15:21:59.69:854,60,0	0/0:11,0:11:33.08:0,33,536	1/1:8,0:8:20.27:151,20,0
chr10	97734193	.	T	TTG	731.67	PASS	AB=0.943;AC=5;AF=0.089;AN=56;BaseQRankSum=6.779;DP=470;FS=6.687;HRun=0;HaplotypeScore=94.1136;InbreedingCoeff=0.4122;MQ=64.70;MQ0=4;MQRankSum=-6.328;QD=10.76;ReadPosRankSum=-1.825;VQSLOD=2.3296;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:18.57:225,19,0	0/0:5,0:5:11.81:0,12,87	0/0:17,0:7:14.27:0,14,75	0/1:9,0:5:7.11:7,0,35	0/0:24,0:24:63.81:0,64,794	0/0:16,0:16:29.17:0,29,302	0/0:13,0:13:38.79:0,39,442	0/1:23,6:29:19.19:436,0,19	0/0:14,0:14:41.78:0,42,499	0/0:23,0:23:69.03:0,69,910	0/0:18,0:18:44.91:0,45,560	0/0:16,0:16:47.94:0,48,577	0/0:14,0:14:36.09:0,36,479	0/0:14,0:14:42.08:0,42,549	0/0:15,0:15:44.88:0,45,498	0/0:22,0:21:47.99:0,48,420	0/0:15,0:15:43.74:0,44,522	0/0:23,0:23:27.91:0,28,396	0/0:15,0:15:41.48:0,41,527	0/0:22,0:22:63.26:0,63,667	0/0:16,0:16:41.79:0,42,532	0/0:15,0:15:41.88:0,42,494	0/0:16,0:16:34.12:0,34,487	0/0:7,0:7:18.05:0,18,250	0/0:27,0:27:79.21:0,79,939	0/0:24,0:24:39.04:0,39,406	0/0:11,0:11:33.09:0,33,455	0/1:12,0:12:5.91:182,0,6
chr10	97734220	.	GA	G	1702.61	PASS	AB=0.857;AC=11;AF=0.196;AN=56;BaseQRankSum=6.661;DP=464;FS=18.521;HRun=10;HaplotypeScore=78.1202;InbreedingCoeff=0.8242;MQ=72.92;MQ0=2;MQRankSum=-3.797;QD=13.62;ReadPosRankSum=2.549;VQSLOD=2.1159;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,9:14:7.37:189,7,0	0/0:4,0:4:6.02:0,6,66	0/0:17,0:12:15:0,15,131	0/0:22,0:16:16.80:0,17,142	0/0:20,0:25:59.54:0,60,557	0/0:16,0:20:41.93:0,42,438	0/0:8,0:8:21.04:0,21,223	1/1:5,28:34:71.93:621,72,0	0/0:13,0:13:36.03:0,36,362	0/0:22,0:22:39.96:0,40,402	0/0:16,0:16:43.26:0,43,407	0/0:11,0:11:24.03:0,24,242	0/0:15,0:15:10.35:0,10,318	0/0:13,0:13:30.06:0,30,312	0/0:12,0:13:32.87:0,33,325	0/0:21,0:20:36.07:0,36,376	0/1:14,3:18:24.26:24,0,380	1/1:2,21:23:56.98:495,57,0	0/0:15,0:15:33.07:0,33,345	0/0:20,0:20:43.25:0,43,405	0/0:13,0:13:27.02:0,27,276	0/0:12,0:12:30.03:0,30,310	0/0:19,0:19:53.97:0,54,520	0/0:6,0:6:18:0,18,178	0/0:18,0:18:37.33:0,37,388	1/1:13,12:25:12.80:286,13,0	0/0:15,0:15:42.11:0,42,457	1/1:1,10:11:29.98:260,30,0
chr10	97734576	.	CTTCT	C	2401.36	PASS	AB=0.724;AC=31;AF=0.646;AN=48;BaseQRankSum=5.910;DP=507;FS=10.900;HRun=0;HaplotypeScore=101.6471;InbreedingCoeff=0.6165;MQ=59.16;MQ0=4;MQRankSum=-3.530;QD=7.82;ReadPosRankSum=-1.418;VQSLOD=1.7087;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:0.47:1,0,0	1/1:1,3:4:9.03:136,9,0	./.	./.	0/1:15,6:21:3.57:138,0,4	1/1:12,6:18:9.03:136,9,0	1/1:12,0:12:5.99:49,6,0	./.	1/1:7,0:17:15.02:139,15,0	0/0:14,0:27:32.58:0,33,460	0/0:20,0:20:24.07:0,24,489	1/1:16,0:16:12.03:158,12,0	1/1:10,4:14:12.04:181,12,0	0/0:14,0:14:15.05:0,15,325	0/0:21,0:21:30.08:0,30,572	1/1:10,7:17:21.07:316,21,0	0/0:21,0:21:5.94:0,6,41	1/1:11,6:18:23.88:287,24,0	0/1:18,0:23:13.01:49,0,13	1/1:15,0:29:7.45:185,7,0	./.	0/0:18,0:18:24.07:0,24,444	1/1:12,12:24:27.09:407,27,0	1/1:12,0:13:3:28,3,0	0/0:20,0:20:30.09:0,30,634	0/1:6,0:28:34.46:107,0,34	1/1:9,0:17:15.02:139,15,0	1/1:14,0:22:14.69:123,15,0
chr10	97735113	.	A	ATT	1145.54	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.116;DP=451;FS=11.385;HRun=8;HaplotypeScore=55.7413;InbreedingCoeff=0.9118;MQ=62.31;MQ0=1;MQRankSum=-0.520;QD=20.46;ReadPosRankSum=0.082;VQSLOD=0.8175;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:32:72.25:1143,72,0	0/0:9,0:9:27.04:0,27,283	0/0:6,0:6:15.51:0,16,168	0/0:3,0:2:6.01:0,6,64	0/0:24,0:23:60.14:0,60,669	0/0:20,0:20:45.01:0,45,492	0/0:8,0:8:21.01:0,21,213	0/0:33,0:34:78.05:0,78,906	0/0:11,0:11:27.05:0,27,290	0/0:18,0:18:48.12:0,48,529	0/0:15,0:15:42.11:0,42,468	0/0:15,0:15:39.09:0,39,435	0/0:13,0:13:36.09:0,36,401	0/0:21,0:21:48.08:0,48,523	0/0:21,0:21:60.15:0,60,669	0/0:18,0:18:48.09:0,48,515	0/0:23,0:23:66.14:0,66,723	0/0:13,0:13:16.09:0,16,339	0/0:15,0:15:30.05:0,30,334	0/0:19,0:19:51.13:0,51,566	0/0:14,0:14:36.08:0,36,392	0/0:7,0:7:18.02:0,18,182	0/0:10,0:10:27.07:0,27,295	0/0:5,0:5:15.04:0,15,167	0/0:16,0:16:42.10:0,42,468	1/1:4,0:23:14.35:121,14,0	0/0:23,0:23:66.17:0,66,736	0/0:14,0:14:42.11:0,42,468
chr10	97735399	.	C	CA	3907.32	PASS	AB=0.541;AC=11;AF=0.212;AN=52;BaseQRankSum=11.573;DP=493;FS=1.394;HRun=1;HaplotypeScore=57.2924;InbreedingCoeff=0.8673;MQ=53.11;MQ0=25;MQRankSum=-2.928;QD=34.58;ReadPosRankSum=-2.614;VQSLOD=2.7517;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,34:36:87.26:1239,87,0	0/0:10,0:10:27.09:0,27,350	./.	./.	0/0:18,0:18:51.17:0,51,662	0/0:19,0:19:51.17:0,51,661	0/0:14,0:14:36.12:0,36,466	1/1:5,13:15:45.05:577,45,0	0/0:12,0:12:30.10:0,30,390	0/0:16,0:16:48.16:0,48,623	0/0:6,0:6:15.05:0,15,195	0/0:15,0:15:45.13:0,45,570	0/0:16,0:16:39.13:0,39,502	0/0:24,0:24:72.17:0,72,900	0/0:26,0:26:75.23:0,75,960	1/1:1,13:14:39.13:584,39,0	0/0:41,2:43:33.32:0,33,1423	1/1:0,17:17:42.14:607,42,0	0/0:19,0:19:57.14:0,57,706	0/0:15,0:15:45.15:0,45,578	0/0:5,0:5:15.05:0,15,195	0/0:6,0:6:15.02:0,15,165	0/0:4,0:4:12.04:0,12,156	0/0:18,0:18:51.16:0,51,649	0/0:16,0:16:48.14:0,48,609	0/1:3,17:20:62.69:595,0,63	0/0:26,0:26:78.25:0,78,1008	1/1:0,7:7:21.07:305,21,0
chr10	97736267	.	ATG	A	3677.64	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=14.053;DP=1078;FS=7.421;HRun=0;HaplotypeScore=159.4157;InbreedingCoeff=0.8801;MQ=56.05;MQ0=15;MQRankSum=-1.276;QD=21.89;ReadPosRankSum=1.313;VQSLOD=4.1447;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,34:44:78.72:991,79,0	0/0:17,0:17:42.14:0,42,702	0/0:67,1:22:28.76:0,29,679	0/0:67,1:23:60.08:0,60,928	0/0:26,1:27:43.16:0,43,1201	0/0:24,0:24:60.17:0,60,943	0/0:42,0:42:99:0,102,1697	1/1:6,19:25:54.16:676,54,0	0/0:44,0:44:99:0,117,1909	0/0:41,1:42:82.19:0,82,1878	0/0:19,0:19:48.16:0,48,803	0/0:50,0:50:99:0,114,1894	0/0:35,0:35:96.31:0,96,1567	0/0:38,0:38:99:0,99,1631	0/0:43,0:43:99:0,114,1874	0/1:35,0:34:14.04:14,0,548	0/0:36,0:36:94.20:0,94,1534	1/1:2,14:16:21.78:476,22,0	0/0:34,0:30:81.28:0,81,1339	0/0:15,1:16:9.95:0,10,683	0/0:138,0:137:99:0,352,5682	0/0:39,0:39:99:0,105,1748	0/0:20,0:20:45.15:0,45,753	0/0:55,1:56:91.24:0,91,2026	0/0:23,0:23:57.14:0,57,859	1/1:5,30:35:77.89:1139,78,0	0/0:31,0:30:87.30:0,87,1448	1/1:2,11:13:30.10:382,30,0
chr10	97736311	.	GCACGCATGCATGCATGGGTGTATGCA	G	2906.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.330;DP=1072;FS=0.760;HRun=0;HaplotypeScore=678.5371;InbreedingCoeff=0.8981;MQ=59.15;MQ0=0;MQRankSum=-8.415;QD=83.03;ReadPosRankSum=-0.692;VQSLOD=0.0666;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,142,12148	0/0:26,0:26:78.27:0,78,7126	0/0:11,0:4:6.02:0,6,163	0/0:12,0:8:17.68:0,18,324	0/0:28,0:27:81.28:0,81,7002	0/0:13,0:13:39.13:0,39,3032	0/0:49,0:49:99:0,144,11876	0/0:45,0:45:99:0,135,8636	0/0:60,0:60:99:0,181,18033	0/0:47,0:47:99:0,135,12203	0/0:19,0:19:54.19:0,54,5579	0/0:63,0:63:99:0,187,18780	0/0:51,0:51:99:0,153,14268	0/0:52,0:52:99:0,157,14900	0/0:52,0:52:99:0,157,14636	1/1:0,35:34:53.86:3001,54,0	0/0:32,0:32:96.31:0,96,8878	0/0:18,0:18:51.18:0,51,4674	0/0:29,0:29:87.29:0,87,6108	0/0:18,0:18:54.19:0,54,5466	0/0:125,0:125:99:0,345,32603	0/0:33,0:33:99:0,99,9254	0/0:22,0:22:60.21:0,60,6393	0/0:50,0:50:99:0,145,12500	0/0:30,0:30:85.53:0,86,8922	0/0:43,0:43:99:0,126,11261	0/0:35,0:34:99:0,105,9722	0/0:22,0:22:63.22:0,63,6599
chr10	97736479	.	ATG	A	2620.57	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=11.169;DP=1197;FS=11.089;HRun=0;HaplotypeScore=163.6117;InbreedingCoeff=0.9860;MQ=58.95;MQ0=5;MQRankSum=-4.818;QD=28.80;ReadPosRankSum=-0.080;VQSLOD=4.8351;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,138,2320	0/0:19,1:20:12.56:0,13,771	0/0:49,0:27:45.52:0,46,904	0/0:44,0:25:45.61:0,46,986	0/0:25,0:25:69.24:0,69,1145	0/0:18,0:18:51.17:0,51,854	0/0:51,0:51:99:0,123,2070	0/0:64,1:65:99:0,121,2531	0/0:56,0:56:99:0,116,2469	0/0:43,0:43:99:0,117,1955	0/0:20,0:20:54.18:0,54,911	0/0:68,1:69:99:0,154,3115	0/0:43,0:43:99:0,120,1987	0/0:46,0:46:99:0,120,1964	0/0:78,0:78:99:0,190,3689	1/1:2,55:57:99:1852,144,0	0/0:30,0:30:87.30:0,87,1467	1/1:6,28:34:70.47:891,70,0	0/0:21,0:19:48.12:0,48,768	0/0:35,0:35:84.29:0,84,1408	0/0:114,0:114:99:0,283,4679	0/0:25,0:25:66.23:0,66,1113	0/0:31,1:32:42.66:0,43,1277	0/0:42,0:41:99:0,111,1834	0/0:31,0:31:82.76:0,83,1414	0/0:38,0:38:99:0,99,1644	0/0:22,0:22:48.16:0,48,807	0/0:30,0:30:78.25:0,78,1286
chr10	97736604	.	CAT	C	1331.09	PASS	AB=0.544;AC=7;AF=0.125;AN=56;BaseQRankSum=8.335;DP=904;FS=16.055;HRun=0;HaplotypeScore=152.4886;InbreedingCoeff=0.7451;MQ=58.10;MQ0=8;MQRankSum=-1.260;QD=9.79;ReadPosRankSum=-2.455;VQSLOD=2.2158;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:8,41:49:22.71:23,0,87	0/0:16,0:16:26.84:0,27,285	0/0:37,0:8:16.10:0,16,115	0/0:41,0:16:6.89:0,7,113	0/0:24,0:24:44.84:0,45,647	0/0:21,0:21:44.27:0,44,336	0/0:29,0:29:64.52:0,65,772	1/1:43,0:43:81.58:827,82,0	0/0:30,0:30:59.68:0,60,636	0/0:36,0:36:81.96:0,82,894	0/0:24,0:22:44.97:0,45,453	0/0:52,0:52:99:0,132,1458	0/0:33,0:33:84.29:0,84,899	0/0:42,0:42:92.25:0,92,956	0/0:45,0:45:99:0,113,1126	0/0:55,0:53:74.93:0,75,486	0/0:30,0:30:71.92:0,72,905	0/0:20,0:20:37.38:0,37,309	0/0:13,0:13:35.93:0,36,334	0/0:20,0:20:45.81:0,46,579	0/0:71,0:71:99:0,156,1504	0/0:25,0:25:44.83:0,45,533	0/0:19,0:19:29.03:0,29,367	0/0:35,0:35:77.99:0,78,901	0/0:29,0:29:46.46:0,46,565	1/1:32,0:32:55.85:595,56,0	0/0:21,0:21:56.93:0,57,535	1/1:12,0:12:2.87:25,3,0
chr10	97736609	.	ATATGTGTGTGTG	A	2989.12	PASS	AB=0.842;AC=5;AF=0.089;AN=56;BaseQRankSum=9.653;DP=919;FS=17.525;HRun=0;HaplotypeScore=300.7190;InbreedingCoeff=0.2148;MQ=56.09;MQ0=10;MQRankSum=-2.364;QD=20.47;ReadPosRankSum=-1.275;VQSLOD=1.0288;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:27.09:0,27,1284	0/0:17,0:17:44.84:0,45,1234	0/0:32,0:6:16.13:0,16,144	0/0:38,0:14:8.11:0,8,122	0/0:21,0:21:63.05:0,63,2161	0/0:19,0:19:44.57:0,45,881	0/0:29,0:28:68.04:0,68,2497	0/1:42,0:42:14.19:698,0,14	0/0:29,0:29:77.45:0,77,2188	0/0:38,0:38:99:0,111,3342	0/0:22,0:20:41.68:0,42,1406	0/0:56,0:56:99:0,150,4681	0/0:35,0:35:99:0,99,2992	0/0:41,0:41:99:0,114,3800	0/0:48,0:48:99:0,129,4162	0/1:53,0:51:99:852,0,321	0/0:31,0:31:84.10:0,84,3501	0/0:21,0:20:38.17:0,38,803	0/0:14,0:14:38.96:0,39,697	0/0:21,0:21:54.08:0,54,2033	0/0:74,0:74:99:0,172,3710	0/0:30,0:30:62.77:0,63,2396	0/0:17,0:17:32.06:0,32,1009	0/0:34,0:34:90.17:0,90,3608	0/0:32,0:32:68.73:0,69,1968	0/1:4,33:39:72.69:1496,0,73	0/0:22,0:22:59.42:0,59,1632	1/1:0,0:12:2.65:54,3,0
chr10	97736611	.	ATG	A	378.58	PASS	AB=0.925;AC=19;AF=0.365;AN=52;BaseQRankSum=7.316;DP=921;FS=40.757;HRun=0;HaplotypeScore=159.1718;InbreedingCoeff=0.0148;MQ=55.73;MQ0=11;MQRankSum=-2.676;QD=0.96;ReadPosRankSum=1.906;VQSLOD=1.2602;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:15.48:0,15,309	0/1:15,1:16:38.12:38,0,99	./.	0/0:38,0:14:0:0,0,0	0/1:19,2:21:34.77:35,0,274	1/1:17,0:20:5.68:28,6,0	0/0:29,0:28:30.53:0,31,396	./.	0/1:27,0:28:25.15:25,0,232	0/1:36,2:38:9.37:9,0,365	0/0:22,0:20:15.04:0,15,194	0/0:54,0:56:21.65:0,22,715	0/1:32,1:33:10.67:11,0,369	0/0:41,0:42:4.30:0,4,371	0/0:47,0:47:1.89:0,2,529	1/1:30,0:50:39.61:192,40,0	0/0:35,0:34:48.86:0,49,610	0/1:18,0:19:9.28:19,0,9	0/1:15,0:15:13.53:14,0,55	0/1:18,2:20:8.33:8,0,282	0/0:76,1:77:11.46:0,11,360	0/1:24,6:30:3.01:3,0,286	0/1:17,0:17:3.42:3,0,163	0/0:34,0:34:48.06:0,48,596	0/1:24,9:33:40.87:41,0,189	1/1:39,0:39:4.23:91,4,0	0/0:22,0:22:14.57:0,15,193	1/1:13,0:12:2.71:14,3,0
chr10	97738894	.	C	CA	1830.49	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.855;DP=562;FS=4.999;HRun=1;HaplotypeScore=56.7400;InbreedingCoeff=0.9760;MQ=74.77;MQ0=0;MQRankSum=1.715;QD=32.69;ReadPosRankSum=-3.614;VQSLOD=2.1668;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:80.36:0,80,574	0/0:11,0:11:33.11:0,33,426	0/0:13,0:13:17.17:0,17,222	0/0:10,0:7:11.31:0,11,172	0/0:21,0:21:50.42:0,50,681	0/0:32,0:31:84.16:0,84,1012	0/0:22,0:22:60.13:0,60,728	1/1:0,36:36:99:1405,108,0	0/0:20,0:20:54.16:0,54,685	0/0:27,0:27:81.25:0,81,1023	0/0:25,0:25:72.14:0,72,882	0/0:15,0:15:39.12:0,39,490	0/0:10,0:10:27.05:0,27,317	0/0:20,0:20:60.14:0,60,709	0/0:21,0:21:55.99:0,56,716	0/0:14,0:14:42.09:0,42,497	0/0:25,0:25:72.07:0,72,878	0/0:21,0:21:57.16:0,57,721	0/0:17,0:17:42.13:0,42,528	0/0:20,0:20:57.12:0,57,690	0/0:15,0:15:45.13:0,45,551	0/0:20,0:20:59.96:0,60,672	0/0:22,0:22:63.18:0,63,787	0/0:13,0:13:39.06:0,39,444	0/0:18,0:18:51.15:0,51,633	0/0:18,0:18:39.83:0,40,598	0/0:28,0:28:81.23:0,81,1016	1/1:3,17:20:37.87:547,38,0
chr10	97738895	.	AT	A	536.67	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.994;DP=556;FS=11.726;HRun=9;HaplotypeScore=58.3339;InbreedingCoeff=0.9792;MQ=74.16;MQ0=0;MQRankSum=-0.660;QD=19.17;ReadPosRankSum=1.968;VQSLOD=3.3319;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:69.03:632,69,0	0/0:11,0:11:33.10:0,33,381	0/0:13,0:13:18.54:0,19,182	0/0:9,0:6:17.07:0,17,163	0/0:20,0:21:53.99:0,54,603	0/0:30,0:29:75.22:0,75,866	0/0:21,1:22:32.69:0,33,617	0/0:36,0:36:81.47:0,81,473	0/0:19,0:19:57.17:0,57,656	0/0:27,0:27:81.23:0,81,926	0/0:25,0:25:72.16:0,72,807	0/0:15,0:15:42.10:0,42,472	0/0:10,0:10:24.07:0,24,277	0/0:20,0:20:45.13:0,45,517	0/0:20,0:21:53.99:0,54,603	0/0:14,0:14:39.11:0,39,442	0/0:25,0:25:72.20:0,72,820	0/0:20,0:20:57.17:0,57,658	0/0:17,0:17:48.13:0,48,543	0/0:19,1:20:26.69:0,27,553	0/0:15,0:15:39.12:0,39,450	0/0:20,0:20:46.36:0,46,512	0/0:22,0:22:63.17:0,63,708	0/0:13,0:13:36.09:0,36,406	0/0:17,0:17:48.14:0,48,554	0/0:16,0:18:50.82:0,51,548	0/0:28,0:28:78.23:0,78,900	0/0:20,0:20:40.79:0,41,243
chr10	97740897	.	GC	G	602.30	PASS	AB=0.885;AC=12;AF=0.214;AN=56;BaseQRankSum=2.492;DP=429;FS=24.321;HRun=11;HaplotypeScore=55.8687;InbreedingCoeff=-0.1313;MQ=75.70;MQ0=0;MQRankSum=0.470;QD=3.40;ReadPosRankSum=1.434;VQSLOD=-0.4515;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:20,10:30:40.66:318,41,0	0/0:14,0:14:23.19:0,23,196	0/1:17,0:18:12.19:12,0,176	0/0:9,1:10:12.98:0,13,101	0/1:10,0:10:4.79:5,0,51	0/0:14,0:14:21.01:0,21,208	0/0:27,1:28:12.27:0,12,269	0/0:21,0:21:9.02:0,9,96	0/0:15,1:16:1.33:0,1,212	0/0:7,0:7:8.76:0,9,76	0/1:9,1:10:12.62:13,0,77	0/1:16,2:18:16.22:16,0,240	0/0:14,1:15:2.40:0,2,213	0/0:10,0:10:12.02:0,12,120	0/0:14,0:15:2.71:0,3,213	0/0:13,1:14:4.92:0,5,239	0/0:25,2:27:6.13:0,6,429	0/1:10,16:28:7.82:283,0,8	0/0:16,1:17:10.27:0,10,92	0/0:6,0:6:9.01:0,9,89	0/1:25,2:27:16.30:16,0,211	0/1:2,1:3:18.59:19,0,26	0/1:11,0:12:10.18:10,0,55	0/0:17,1:18:2.37:0,2,208	0/1:8,2:10:23.02:40,0,23	0/1:10,1:11:15.62:16,0,48	0/0:14,2:16:8.49:0,8,273	0/0:4,0:4:9.02:0,9,96
chr10	97741118	.	TA	T	653.17	PASS	AB=0.900;AC=5;AF=0.089;AN=56;BaseQRankSum=8.508;DP=617;FS=3.399;HRun=9;HaplotypeScore=65.7875;InbreedingCoeff=0.7977;MQ=78.88;MQ0=0;MQRankSum=-0.729;QD=10.89;ReadPosRankSum=1.141;VQSLOD=2.7191;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,156,1749	0/0:10,0:10:27.04:0,27,288	0/0:16,1:18:2.67:0,3,251	0/0:15,0:14:16.93:0,17,299	0/0:19,0:19:51.14:0,51,577	0/0:29,1:30:53.60:0,54,835	0/0:35,1:36:77.56:0,78,1014	0/0:27,1:28:45.53:0,46,704	0/0:13,0:13:33.10:0,33,381	0/0:32,0:32:59.74:0,60,839	0/0:15,0:15:33.08:0,33,363	0/0:18,0:18:50.93:0,51,524	0/0:29,0:29:81.24:0,81,932	0/0:20,0:20:48.13:0,48,546	0/0:34,0:34:84.24:0,84,960	0/0:11,0:11:33.09:0,33,372	0/0:25,0:25:69.19:0,69,787	1/1:26,0:26:60.26:240,60,0	0/0:18,0:18:42.12:0,42,476	0/0:19,0:19:57.17:0,57,651	0/0:16,0:16:45.09:0,45,495	0/0:13,0:13:39.11:0,39,446	0/0:17,0:17:48.13:0,48,540	0/0:23,0:23:66.15:0,66,729	0/0:16,0:16:48.14:0,48,553	1/1:5,20:25:59.93:534,60,0	0/0:27,0:27:69.19:0,69,787	0/1:7,1:9:0.54:1,0,230
chr10	97741127	.	AC	A	756.78	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=8.176;DP=613;FS=3.326;HRun=4;HaplotypeScore=64.7541;InbreedingCoeff=0.5828;MQ=81.29;MQ0=0;MQRankSum=-2.250;QD=15.14;ReadPosRankSum=1.618;VQSLOD=2.7996;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,165,2087	0/0:9,0:9:24.08:0,24,318	0/0:19,0:19:49.17:0,49,464	0/0:17,0:16:4.16:0,4,371	0/0:16,0:17:48.11:0,48,576	0/0:30,0:30:70.12:0,70,978	0/0:34,0:34:79.04:0,79,1073	0/0:32,0:32:84.18:0,84,1003	0/0:12,0:12:36.11:0,36,466	0/0:29,0:29:81.25:0,81,1039	0/0:10,0:10:27.09:0,27,349	0/0:23,0:23:60.12:0,60,705	0/0:29,0:29:87.26:0,87,1118	0/0:17,0:17:48.13:0,48,607	0/0:31,0:31:90.27:0,90,1168	0/0:12,0:12:33.10:0,33,425	0/0:26,0:26:68.06:0,68,839	1/1:0,27:27:69.21:822,69,0	0/0:17,0:17:48.05:0,48,588	0/0:21,0:21:63.17:0,63,795	0/0:17,0:17:45.13:0,45,582	0/0:13,0:13:39.13:0,39,506	0/0:16,0:16:48.16:0,48,634	0/0:23,0:23:63.18:0,63,821	0/0:18,0:18:54.11:0,54,656	0/1:23,0:23:40.99:41,0,45	0/0:26,0:26:75.20:0,75,951	0/0:9,0:9:20.40:0,20,296
chr10	97741953	.	GA	G	797.92	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.079;DP=630;FS=2.113;HRun=9;HaplotypeScore=72.1216;InbreedingCoeff=0.9349;MQ=66.16;MQ0=5;MQRankSum=-0.666;QD=19.46;ReadPosRankSum=-2.195;VQSLOD=3.4003;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.24:0,90,1022	0/0:3,0:3:6.01:0,6,64	0/0:15,0:9:16.26:0,16,156	0/0:13,0:11:18.70:0,19,191	0/0:27,0:27:65.44:0,65,777	0/0:20,0:20:57.16:0,57,649	0/0:23,0:23:62:0,62,697	1/1:3,27:30:71.87:645,72,0	0/0:21,0:21:60.17:0,60,682	0/0:24,0:24:51.15:0,51,587	0/0:30,0:29:84.25:0,84,968	0/0:25,0:25:72.21:0,72,829	0/0:19,0:19:51.11:0,51,565	0/0:14,0:13:36.11:0,36,415	0/0:24,0:24:54.07:0,54,732	0/0:31,0:31:78.23:0,78,900	0/0:36,0:36:78.14:0,78,862	0/0:17,1:18:17.60:0,18,429	0/0:19,0:19:51.13:0,51,576	0/0:25,0:25:57.14:0,57,639	0/0:26,0:26:69.08:0,69,744	0/0:30,0:29:72.21:0,72,829	0/0:17,0:17:45.13:0,45,516	0/0:26,0:26:72.19:0,72,812	0/0:24,0:23:66.03:0,66,719	0/0:4,0:15:29.83:0,30,199	0/0:29,0:28:75.18:0,75,840	1/1:0,11:11:30.02:275,30,0
chr10	97743049	.	AAC	A	413.90	PASS	AB=1.000;AC=22;AF=0.423;AN=52;BaseQRankSum=3.527;DP=430;FS=10.884;HRun=0;HaplotypeScore=64.1067;InbreedingCoeff=-0.1018;MQ=68.93;MQ0=19;MQRankSum=1.580;QD=1.84;ReadPosRankSum=0.102;VQSLOD=0.4956;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:5.99:48,6,0	1/1:10,0:10:2.29:44,2,0	./.	0/0:34,0:16:0:0,0,0	0/1:18,0:18:12.16:12,0,43	0/1:13,0:12:34.06:46,0,34	0/0:19,0:19:2.97:0,3,20	0/0:23,0:23:1.25:0,1,3	0/1:10,0:10:28:31,0,28	0/0:6,0:5:0.27:0,0,43	0/0:16,4:20:5.62:0,6,29	0/0:9,0:8:2.94:0,3,18	0/1:13,0:13:8.69:9,0,36	0/1:12,0:12:27.89:28,0,31	0/1:12,0:12:4.84:5,0,95	1/1:11,0:10:17.83:124,18,0	0/1:18,0:18:3.39:3,0,32	1/1:11,0:10:8.97:72,9,0	1/1:9,0:9:3.89:29,4,0	0/1:14,0:12:8.91:9,0,44	0/1:20,0:18:18.28:18,0,81	0/1:16,0:15:49.92:53,0,50	0/1:8,0:8:14.42:14,0,32	0/0:24,0:24:16.37:0,16,156	0/0:17,0:17:14.89:0,15,113	0/1:10,0:10:16.04:16,0,39	0/0:16,0:16:16.71:0,17,103	./.
chr10	97743553	.	G	GAGAAAA	3510.36	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.634;DP=666;FS=0.639;HRun=0;HaplotypeScore=133.7217;InbreedingCoeff=0.9976;MQ=81.58;MQ0=0;MQRankSum=-8.925;QD=71.64;ReadPosRankSum=1.761;VQSLOD=4.5218;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,2449	0/0:7,0:7:21.07:0,21,473	0/0:23,0:23:56.44:0,56,1057	0/0:23,0:23:54.18:0,54,1164	0/0:22,0:22:60.21:0,60,1328	0/0:18,0:18:54.19:0,54,1218	0/0:26,0:26:75.23:0,75,1590	0/0:35,0:35:93.31:0,93,1972	0/0:20,0:20:60.17:0,60,1221	0/0:36,0:36:93.31:0,93,2007	0/0:15,0:15:36.11:0,36,771	0/0:28,0:28:84.26:0,84,1792	0/0:19,0:19:57.17:0,57,1199	0/0:24,0:24:66.23:0,66,1471	0/0:21,0:21:57.19:0,57,1287	0/0:40,0:40:99:0,111,2488	0/0:27,0:27:75.26:0,75,1649	1/1:8,9:18:33.11:1111,33,0	0/0:17,0:17:48.16:0,48,1034	0/0:17,0:17:45.15:0,45,1013	0/0:29,0:29:72.25:0,72,1604	0/0:27,0:27:69.23:0,69,1487	0/0:21,0:21:63.19:0,63,1301	0/0:29,0:29:87.28:0,87,1900	0/0:16,0:16:45.14:0,45,972	1/1:7,23:31:75.22:2400,75,0	0/0:25,0:25:72.23:0,72,1497	0/0:11,0:11:33.11:0,33,704
chr10	97743858	.	A	ACAGATACC	1112.16	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.157;DP=446;FS=13.128;HRun=0;HaplotypeScore=115.9808;InbreedingCoeff=0.8689;MQ=93.18;MQ0=0;MQRankSum=-4.601;QD=101.11;ReadPosRankSum=0.854;VQSLOD=4.0680;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,2670	0/0:4,0:4:12.04:0,12,336	0/0:18,0:18:47.12:0,47,1171	0/0:22,0:22:60.25:0,60,1457	0/0:17,0:17:48.16:0,48,1256	0/0:14,0:14:42.14:0,42,1139	0/0:27,0:27:72.25:0,72,1983	0/0:12,0:12:33.10:0,33,809	0/0:11,0:11:30.10:0,30,837	0/0:19,0:19:51.18:0,51,1403	0/0:12,0:12:33.11:0,33,876	0/0:27,0:27:78.25:0,78,2081	0/0:12,0:12:36.12:0,36,993	0/0:12,0:12:33.11:0,33,922	0/0:25,0:25:75.23:0,75,1963	0/0:16,0:16:42.14:0,42,1175	0/0:29,0:29:78.25:0,78,2083	1/1:2,8:11:30.09:1206,30,0	0/0:13,0:13:33.11:0,33,878	0/0:10,0:10:30.10:0,30,799	0/0:25,0:25:69.22:0,69,1835	0/0:7,0:7:18.06:0,18,503	0/0:7,0:7:21.07:0,21,575	0/0:13,0:13:39.09:0,39,1027	0/0:16,0:16:48.16:0,48,1329	0/0:14,0:14:42.14:0,42,1060	0/0:16,0:16:48.16:0,48,1301	0/0:2,0:2:6.02:0,6,168
chr10	97743913	.	AT	A	585.22	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=1.198;DP=253;FS=53.999;HRun=2;HaplotypeScore=32.3976;InbreedingCoeff=0.7327;MQ=86.22;MQ0=1;MQRankSum=-1.830;QD=15.01;ReadPosRankSum=-1.927;VQSLOD=0.0328;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:24.86:269,25,0	0/0:2,0:2:6.01:0,6,68	0/0:21,0:16:21.36:0,21,283	0/0:10,0:8:14.86:0,15,107	0/0:5,0:5:9.47:0,9,80	0/0:11,0:11:23.99:0,24,227	0/0:22,0:22:44.97:0,45,428	1/1:12,0:12:30:265,30,0	0/0:8,0:8:21.03:0,21,228	0/0:3,0:3:9.01:0,9,87	0/0:6,0:6:15.47:0,15,134	0/0:20,0:20:44.92:0,45,381	0/0:3,0:3:8.99:0,9,79	0/0:4,0:4:11.98:0,12,131	0/0:15,0:15:33.06:0,33,351	0/0:5,0:5:14.96:0,15,124	0/0:19,0:19:53.92:0,54,459	1/1:5,5:10:23.71:178,24,0	0/0:7,0:7:20.97:0,21,194	0/0:4,0:4:2.54:0,3,11	0/0:15,0:15:33.32:0,33,269	0/0:1,0:1:3:0,3,27	0/0:2,0:2:6:0,6,52	0/0:9,0:9:20.97:0,21,181	0/0:10,0:10:27.01:0,27,240	0/0:5,0:5:9.24:0,9,60	0/0:7,0:7:18.02:0,18,191	1/1:3,0:3:2.23:21,2,0
chr10	97743931	.	CA	C	559.16	PASS	AB=0.981;AC=19;AF=0.352;AN=54;BaseQRankSum=0.677;DP=214;FS=9.141;HRun=1;HaplotypeScore=27.7741;InbreedingCoeff=0.1938;MQ=87.81;MQ0=0;MQRankSum=-0.877;QD=5.18;ReadPosRankSum=0.081;VQSLOD=-0.2741;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:17.91:141,18,0	0/1:1,0:1:0:0,0,0	0/0:14,1:13:1.47:0,1,108	0/1:10,1:10:26.56:29,0,27	0/0:9,0:9:11.93:0,12,92	0/1:8,0:8:6.89:7,0,83	0/1:20,2:22:2.81:3,0,122	1/1:3,0:3:6:53,6,0	0/1:7,0:7:20.96:21,0,37	0/1:7,0:7:0.77:1,0,140	0/0:2,0:2:0.47:0,0,1	0/0:8,0:8:11.99:0,12,98	0/1:5,0:5:6.81:7,0,82	0/0:4,0:4:7.37:0,7,66	0/1:11,0:11:24.37:24,0,81	1/1:3,0:3:6:52,6,0	0/0:13,1:14:4.88:0,5,157	1/1:11,1:12:30.22:252,30,0	0/0:5,0:5:8.86:0,9,73	0/0:5,0:5:3.47:0,3,26	0/0:23,0:23:47.56:0,48,365	0/0:5,0:5:3.94:0,4,27	0/0:5,0:5:12.43:0,12,94	0/1:7,0:7:44.39:44,0,77	0/0:4,0:4:5.96:0,6,44	1/1:3,0:3:9:80,9,0	0/0:6,0:6:3.76:0,4,26	./.
chr10	97744328	.	CT	C	769.15	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.303;DP=598;FS=0.000;HRun=4;HaplotypeScore=55.0498;InbreedingCoeff=0.9878;MQ=72.63;MQ0=0;MQRankSum=-3.707;QD=27.47;ReadPosRankSum=1.493;VQSLOD=2.8244;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.21:0,66,906	0/0:10,0:10:27.09:0,27,375	0/0:14,0:14:23.42:0,23,439	0/0:10,0:10:18.04:0,18,238	0/0:32,0:32:84.26:0,84,1154	0/0:31,0:31:84.27:0,84,1155	0/0:16,0:16:48.16:0,48,672	0/0:33,0:33:93.30:0,93,1289	0/0:17,0:17:48.16:0,48,672	0/0:29,0:29:87.28:0,87,1204	0/0:23,0:23:66.21:0,66,909	0/0:12,0:12:33.10:0,33,445	0/0:16,0:16:48.14:0,48,653	0/0:25,0:25:75.24:0,75,1035	0/0:29,0:28:84.27:0,84,1159	0/0:28,0:28:81.27:0,81,1135	0/0:22,0:22:63.20:0,63,851	1/1:0,28:28:72.22:864,72,0	0/0:24,0:24:66.22:0,66,918	0/0:23,0:23:69.22:0,69,949	0/0:12,0:12:36.12:0,36,504	0/0:21,0:21:63.21:0,63,879	0/0:21,0:21:63.20:0,63,866	0/0:13,0:13:39.13:0,39,545	0/0:20,0:20:60.18:0,60,821	0/0:21,0:21:63.20:0,63,867	0/0:35,0:35:99:0,105,1470	0/0:11,0:11:30.10:0,30,420
chr10	97745063	.	ACTCT	A	1339.92	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.090;DP=657;FS=2.502;HRun=0;HaplotypeScore=117.9182;InbreedingCoeff=0.9993;MQ=94.25;MQ0=0;MQRankSum=-3.202;QD=41.87;ReadPosRankSum=2.232;VQSLOD=4.3471;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:62.81:0,63,1637	0/0:10,0:10:30.10:0,30,792	0/0:35,0:35:64.43:0,64,1591	0/0:38,0:36:60.66:0,61,1465	0/0:33,0:33:96.33:0,96,2517	0/0:19,0:18:57.20:0,57,1492	0/0:21,0:21:57.18:0,57,1439	0/0:35,0:35:93.28:0,93,2387	0/0:23,0:23:66.23:0,66,1732	0/0:21,0:21:63.22:0,63,1665	0/0:28,0:28:75.24:0,75,1895	0/0:18,0:18:54.15:0,54,1238	0/0:23,0:23:69.23:0,69,1764	0/0:16,0:16:42.13:0,42,1038	0/0:21,0:21:57.20:0,57,1495	0/0:26,0:26:72.25:0,72,1901	0/0:25,0:25:75.24:0,75,1903	1/1:1,31:32:78.27:1435,78,0	0/0:28,0:28:69.23:0,69,1745	0/0:25,0:25:66.23:0,66,1657	0/0:14,0:14:42.14:0,42,1108	0/0:13,0:13:39.13:0,39,1029	0/0:25,0:25:63.22:0,63,1632	0/0:15,0:15:42.14:0,42,1075	0/0:20,0:20:57.20:0,57,1494	0/0:23,0:23:66.21:0,66,1688	0/0:30,0:30:84.27:0,84,2153	0/0:15,0:15:45.15:0,45,1111
chr10	97745109	.	TTAA	T	986.58	PASS	AB=0.511;AC=1;AF=0.018;AN=56;BaseQRankSum=6.128;DP=633;FS=1.692;HRun=0;HaplotypeScore=89.9018;InbreedingCoeff=0.5528;MQ=82.16;MQ0=0;MQRankSum=0.229;QD=42.89;ReadPosRankSum=0.031;VQSLOD=4.7291;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,2270	0/0:7,0:7:21.07:0,21,497	0/0:21,0:21:30.16:0,30,1001	0/0:14,0:14:19.34:0,19,785	0/0:36,0:36:99:0,105,2370	0/0:16,0:15:48.14:0,48,1044	0/0:18,0:18:51.18:0,51,1184	0/0:35,0:34:99:0,102,2348	0/0:21,0:21:63.22:0,63,1450	0/0:21,0:21:63.20:0,63,1350	0/0:31,0:31:90.27:0,90,1950	0/0:17,0:17:51.16:0,51,1120	0/0:25,0:25:75.18:0,75,1516	0/0:13,0:13:39.13:0,39,903	0/0:29,0:29:87.28:0,87,1947	0/0:22,0:22:66.20:0,66,1408	0/0:30,0:30:87.22:0,87,1867	0/0:28,0:28:75.13:0,75,1635	0/0:26,0:26:78.26:0,78,1784	0/0:27,0:27:81.28:0,81,1911	0/0:18,0:18:54.18:0,54,1166	0/0:16,0:16:42.14:0,42,898	0/0:23,0:23:69.15:0,69,1510	0/0:14,0:14:42.14:0,42,923	0/0:15,0:15:42.14:0,42,935	0/1:1,22:23:1.74:1061,0,2	0/0:33,0:33:90.28:0,90,1974	0/0:19,0:19:57.20:0,57,1333
chr10	97745221	.	GA	G	832.22	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.167;DP=668;FS=12.742;HRun=1;HaplotypeScore=64.1174;InbreedingCoeff=0.9940;MQ=85.59;MQ0=0;MQRankSum=-3.384;QD=34.68;ReadPosRankSum=0.036;VQSLOD=2.1863;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1883	0/0:8,0:8:21.07:0,21,332	0/0:25,0:25:75.21:0,75,1093	0/0:26,0:26:78.23:0,78,1154	0/0:17,0:17:51.17:0,51,813	0/0:20,0:20:60.20:0,60,953	0/0:24,0:24:72.21:0,72,1098	0/0:40,0:40:99:0,120,1838	0/0:20,0:20:60.20:0,60,958	0/0:22,0:22:66.20:0,66,1030	0/0:28,0:28:84.27:0,84,1319	0/0:26,0:26:78.24:0,78,1200	0/0:30,0:30:90.29:0,90,1403	0/0:26,0:26:78.24:0,78,1198	0/0:29,0:29:87.26:0,87,1321	0/0:31,0:31:93.29:0,93,1440	0/0:29,0:29:87.26:0,87,1340	1/1:3,21:24:69.19:927,69,0	0/0:27,0:27:81.25:0,81,1217	0/0:15,0:15:45.15:0,45,719	0/0:24,0:24:66.21:0,66,1031	0/0:18,0:18:51.17:0,51,815	0/0:21,0:21:63.18:0,63,978	0/0:20,0:20:60.19:0,60,932	0/0:20,0:20:60.19:0,60,936	0/0:23,0:23:69.19:0,69,1073	0/0:25,0:25:75.26:0,75,1196	0/0:8,0:8:24.08:0,24,383
chr10	97745510	.	GCATTT	G	1787.55	PASS	AB=0.516;AC=1;AF=0.018;AN=56;BaseQRankSum=7.425;DP=726;FS=0.700;HRun=0;HaplotypeScore=136.5043;InbreedingCoeff=0.4492;MQ=66.19;MQ0=0;MQRankSum=-3.352;QD=55.86;ReadPosRankSum=-0.368;VQSLOD=4.1282;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,3930	0/0:12,0:12:36.12:0,36,1102	0/0:24,0:21:60.21:0,60,1746	0/0:23,0:22:53.08:0,53,1722	0/0:34,0:34:99:0,99,3141	0/0:22,0:22:66.23:0,66,2077	0/0:17,0:17:45.15:0,45,1424	0/0:42,0:42:99:0,126,4009	0/0:25,0:25:75.26:0,75,2323	0/0:29,0:29:84.29:0,84,2639	0/0:25,0:25:75.26:0,75,2280	0/0:21,0:21:63.22:0,63,2034	0/0:21,0:21:63.19:0,63,1962	0/0:24,0:24:72.25:0,72,2313	0/0:32,0:32:96.33:0,96,3051	0/0:25,0:25:75.26:0,75,2366	0/0:33,0:33:99:0,99,3196	0/0:27,0:27:81.28:0,81,2009	0/0:23,0:22:66.23:0,66,2110	0/0:29,0:29:87.30:0,87,2746	0/0:21,0:21:60.21:0,60,1916	0/0:31,0:31:93.32:0,93,2938	0/0:23,0:23:66.23:0,66,2133	0/0:23,0:23:66.23:0,66,2053	0/0:17,0:17:51.18:0,51,1645	0/1:2,30:32:3.67:1862,0,4	0/0:32,0:32:90.31:0,90,2901	0/0:18,0:18:54.19:0,54,1739
chr10	97745606	.	AGTGCT	A	673.07	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.754;DP=662;FS=4.214;HRun=0;HaplotypeScore=121.0464;InbreedingCoeff=0.8433;MQ=61.34;MQ0=8;MQRankSum=-5.292;QD=42.07;ReadPosRankSum=3.257;VQSLOD=3.7278;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,3132	0/0:13,0:13:36.12:0,36,1131	0/0:25,0:15:42.14:0,42,1089	0/0:23,0:17:51.17:0,51,1493	0/0:26,0:26:78.27:0,78,2431	0/0:21,0:21:60.19:0,60,1842	0/0:20,0:19:54.19:0,54,1745	0/0:38,0:38:99:0,111,3392	0/0:23,0:23:66.23:0,66,2084	0/0:23,0:23:69.24:0,69,2190	0/0:22,0:22:66.19:0,66,1934	0/0:22,0:22:66.23:0,66,2068	0/0:22,0:22:60.21:0,60,1927	0/0:17,0:17:48.15:0,48,1434	0/0:26,0:26:75.26:0,75,2424	0/0:32,0:32:96.30:0,96,2924	0/0:33,0:33:96.33:0,96,3066	1/1:5,11:16:4.47:752,4,0	0/0:24,0:22:60.21:0,60,1938	0/0:20,0:20:57.20:0,57,1811	0/0:35,0:35:99:0,105,3248	0/0:15,0:15:45.15:0,45,1386	0/0:26,0:26:75.22:0,75,2336	0/0:30,0:30:90.31:0,90,2809	0/0:27,0:27:81.24:0,81,2450	0/0:24,0:24:69.24:0,69,2191	0/0:13,0:13:39.13:0,39,1228	0/0:12,0:12:36.12:0,36,1163
chr10	97745647	.	CAA	C	1028.38	PASS	AB=0.519;AC=1;AF=0.018;AN=56;BaseQRankSum=6.346;DP=593;FS=1.649;HRun=3;HaplotypeScore=71.9205;InbreedingCoeff=-0.0168;MQ=76.07;MQ0=0;MQRankSum=-1.651;QD=36.73;ReadPosRankSum=1.157;VQSLOD=3.3384;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.25:0,72,1367	0/0:13,0:13:39.13:0,39,754	0/0:13,0:13:39.13:0,39,679	0/0:16,0:16:45.09:0,45,765	0/0:24,0:24:72.24:0,72,1344	0/0:21,0:21:63.20:0,63,1172	0/0:14,0:14:39.13:0,39,746	0/0:31,0:31:90.29:0,90,1651	0/0:26,0:26:78.25:0,78,1437	0/0:29,0:29:84.28:0,84,1583	0/0:15,0:15:45.11:0,45,831	0/0:13,0:13:39.13:0,39,754	0/0:22,0:22:63.20:0,63,1150	0/0:22,0:22:66.23:0,66,1259	0/0:25,0:25:72.25:0,72,1383	0/0:24,0:24:72.24:0,72,1354	0/0:32,0:32:96.32:0,96,1814	0/0:16,0:16:48.03:0,48,784	0/0:19,0:19:57.20:0,57,1101	0/0:23,0:23:69.24:0,69,1333	0/0:17,0:17:51.16:0,51,936	0/0:14,0:14:42.14:0,42,795	0/0:27,0:27:81.27:0,81,1505	0/0:25,0:25:75.25:0,75,1390	0/0:30,0:30:90.31:0,90,1718	0/1:2,26:28:31.62:1103,0,32	0/0:14,0:14:42.14:0,42,764	0/0:15,0:15:45.09:0,45,766
chr10	97746316	.	AAT	A	987.14	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.543;DP=551;FS=13.084;HRun=0;HaplotypeScore=72.2238;InbreedingCoeff=0.9937;MQ=84.30;MQ0=0;MQRankSum=-5.087;QD=36.56;ReadPosRankSum=1.411;VQSLOD=4.6034;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.16:0,57,1002	0/0:8,0:8:24.07:0,24,418	0/0:23,0:23:44.02:0,44,764	0/0:17,0:16:24.94:0,25,583	0/0:21,0:21:63.18:0,63,1111	0/0:25,0:25:75.20:0,75,1277	0/0:23,0:23:69.14:0,69,1220	0/0:45,0:45:99:0,126,2161	0/0:13,0:13:39.13:0,39,723	0/0:28,0:28:81.26:0,81,1451	0/0:16,0:16:45.14:0,45,808	0/0:13,0:13:39.13:0,39,722	0/0:12,0:12:36.12:0,36,663	0/0:11,0:11:33.11:0,33,610	0/0:13,0:13:39.12:0,39,699	0/0:17,0:17:51.16:0,51,922	0/0:24,0:24:69.17:0,69,1253	1/1:1,26:27:75.24:1082,75,0	0/0:9,0:9:27.09:0,27,495	0/0:33,0:33:93.31:0,93,1709	0/0:20,0:19:56.87:0,57,1066	0/0:11,0:11:29.86:0,30,527	0/0:27,0:27:78.23:0,78,1366	0/0:26,0:26:78.27:0,78,1460	0/0:21,0:21:60.19:0,60,1091	0/0:21,0:21:60.21:0,60,1120	0/0:17,0:17:51.17:0,51,950	0/0:10,0:10:30.10:0,30,561
chr10	97746355	.	GGT	G	468.19	PASS	AB=0.921;AC=7;AF=0.125;AN=56;BaseQRankSum=6.377;DP=479;FS=6.771;HRun=0;HaplotypeScore=67.1735;InbreedingCoeff=0.4320;MQ=68.69;MQ0=5;MQRankSum=0.075;QD=5.57;ReadPosRankSum=0.959;VQSLOD=1.7452;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.14:0,54,827	0/0:10,0:10:24.08:0,24,393	1/1:24,1:9:2.70:12,3,0	0/0:28,0:14:9.41:0,9,106	0/0:15,0:15:39.09:0,39,578	0/0:20,0:20:45.15:0,45,734	0/0:23,0:23:57.19:0,57,925	0/0:36,0:36:60.20:0,60,944	0/0:13,0:13:33.10:0,33,512	0/0:21,0:21:57.19:0,57,912	0/0:17,0:17:36.12:0,36,580	0/0:9,0:9:24.08:0,24,394	0/0:9,0:9:27.09:0,27,438	0/1:6,1:7:19.14:19,0,228	0/0:7,0:7:21.07:0,21,341	0/0:9,0:9:24.08:0,24,391	0/0:28,0:29:72.24:0,72,1143	0/1:26,0:26:7.37:7,0,133	0/0:15,0:14:36.10:0,36,557	0/0:23,0:23:48.15:0,48,762	0/0:17,0:17:39.13:0,39,640	0/0:14,0:14:39.11:0,39,615	0/0:16,0:16:45.15:0,45,728	0/0:16,0:16:42.14:0,42,674	0/0:16,0:16:33.11:0,33,541	1/1:2,16:18:45.08:541,45,0	0/0:12,0:12:30.10:0,30,485	0/1:7,1:8:16.14:16,0,251
chr10	97746368	.	GTGTA	G	491.06	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=6.894;DP=458;FS=12.650;HRun=0;HaplotypeScore=82.1105;InbreedingCoeff=0.6409;MQ=65.33;MQ0=5;MQRankSum=-5.576;QD=10.45;ReadPosRankSum=1.408;VQSLOD=1.8472;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.16:0,75,1575	0/0:9,0:9:24.08:0,24,643	0/0:23,0:8:11.66:0,12,77	0/1:21,0:8:10.78:11,0,117	0/0:15,0:15:33.01:0,33,813	0/0:18,0:18:51.16:0,51,1235	0/0:22,0:22:66.20:0,66,1507	0/0:24,0:24:72.14:0,72,1524	0/0:14,0:14:33.07:0,33,774	0/0:20,0:20:57.19:0,57,1441	0/0:16,0:16:45.11:0,45,931	0/0:10,0:10:26.98:0,27,647	0/0:10,0:10:27.09:0,27,664	0/0:7,0:7:18.03:0,18,408	0/0:7,0:7:21.07:0,21,518	0/0:8,0:8:24.07:0,24,558	0/0:28,0:28:77.69:0,78,1793	1/1:19,6:25:39.37:583,39,0	0/0:15,0:14:39.08:0,39,833	0/0:22,0:22:54.17:0,54,1288	0/0:15,0:15:42.10:0,42,1054	0/0:17,0:17:45.12:0,45,1069	0/0:18,0:18:51.16:0,51,1246	0/0:16,0:16:48.09:0,48,1046	0/0:12,0:12:33.11:0,33,863	0/0:20,0:20:56.40:0,56,405	0/0:10,0:10:30.06:0,30,728	0/0:8,0:8:24.02:0,24,504
chr10	97746371	.	T	TGC	572.90	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=7.005;DP=442;FS=1.990;HRun=0;HaplotypeScore=66.9460;InbreedingCoeff=0.7195;MQ=65.98;MQ0=4;MQRankSum=-6.275;QD=20.46;ReadPosRankSum=2.129;VQSLOD=3.3703;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.58:0,73,971	0/0:8,0:8:24.08:0,24,387	0/0:21,0:7:11.13:0,11,60	0/0:19,0:8:10.47:0,10,112	0/0:16,0:16:33.11:0,33,534	0/0:19,0:19:57.14:0,57,830	0/0:22,0:22:66.18:0,66,989	0/0:24,0:24:71.98:0,72,997	0/0:12,0:12:33.08:0,33,484	0/0:20,0:20:60.19:0,60,933	0/0:15,0:15:45.11:0,45,654	0/0:10,0:10:27.08:0,27,415	0/0:10,0:10:27.09:0,27,438	0/0:7,0:7:18.05:0,18,268	0/0:7,0:7:21.07:0,21,338	0/0:9,0:9:27.07:0,27,392	0/0:29,0:29:52.99:0,53,1086	1/1:12,8:20:36.36:667,36,0	0/0:15,0:14:39.09:0,39,561	0/0:19,0:19:54.13:0,54,803	0/0:14,0:14:42.13:0,42,657	0/0:16,0:16:45.11:0,45,660	0/0:18,0:18:51.13:0,51,737	0/0:16,0:16:48.07:0,48,676	0/0:11,0:11:33.11:0,33,536	0/0:21,0:21:59.97:0,60,514	0/0:10,0:10:30.06:0,30,455	0/1:8,0:8:0.66:1,0,268
chr10	97746395	.	C	CGCGT	755.09	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.612;DP=436;FS=10.657;HRun=0;HaplotypeScore=88.4754;InbreedingCoeff=0.7363;MQ=70.54;MQ0=1;MQRankSum=-6.949;QD=26.97;ReadPosRankSum=-0.703;VQSLOD=2.3307;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.14:0,81,1403	0/0:7,0:7:21.04:0,21,339	0/0:12,0:9:2.19:0,2,140	0/0:10,0:7:7.73:0,8,92	0/0:14,0:14:29.99:0,30,439	0/0:18,0:18:51.11:0,51,893	0/0:24,0:24:69.10:0,69,1064	0/0:25,0:25:20.97:0,21,245	0/0:16,0:16:39.08:0,39,605	0/0:23,0:23:66.17:0,66,1028	0/0:19,0:19:56.88:0,57,870	0/0:7,0:7:15:0,15,225	0/0:12,0:12:32.88:0,33,379	0/0:7,0:7:14.99:0,15,218	0/0:6,0:6:15:0,15,220	0/0:6,0:6:18.03:0,18,272	0/0:25,0:25:72.11:0,72,1231	1/1:23,5:28:68.94:850,69,0	0/0:12,0:12:32.90:0,33,573	0/0:17,0:17:42.07:0,42,699	0/0:15,0:15:36.04:0,36,558	0/0:16,0:16:48.16:0,48,865	0/0:18,0:18:45.05:0,45,775	0/0:13,0:13:36.01:0,36,592	0/0:9,0:9:21.04:0,21,339	0/0:25,0:25:63.15:0,63,1048	0/0:15,0:15:39.06:0,39,558	0/0:8,0:8:17.85:0,18,300
chr10	97746880	.	TA	T	1519.55	PASS	AB=0.760;AC=10;AF=0.179;AN=56;BaseQRankSum=11.383;DP=621;FS=7.708;HRun=11;HaplotypeScore=73.1222;InbreedingCoeff=0.7535;MQ=76.74;MQ0=0;MQRankSum=-1.771;QD=10.55;ReadPosRankSum=-0.782;VQSLOD=2.5343;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:32:71.59:0,72,959	0/0:12,0:12:30.04:0,30,303	0/1:13,1:12:12.46:12,0,120	0/0:25,0:25:24.66:0,25,261	0/0:21,0:21:48.12:0,48,512	0/0:15,0:16:47.92:0,48,473	0/0:25,0:26:69.01:0,69,700	1/1:5,32:38:94.79:759,95,0	0/0:23,0:23:57.13:0,57,600	0/0:27,0:27:42.14:0,42,489	0/0:20,0:20:51.09:0,51,522	0/0:26,1:27:44.49:0,44,651	0/0:14,0:14:40.89:0,41,405	0/0:18,0:18:45.11:0,45,473	0/0:19,2:22:10.70:0,11,487	1/1:3,20:23:50.91:419,51,0	0/0:24,0:24:63.09:0,63,642	1/1:2,0:26:44.81:130,45,0	0/0:16,1:17:15.43:0,15,360	0/0:20,0:20:52.25:0,52,509	0/0:17,0:17:14.94:0,15,378	0/0:26,0:27:66.02:0,66,679	0/0:25,2:28:22.72:0,23,623	0/0:20,2:22:38.52:0,39,615	0/0:20,0:20:51.11:0,51,530	0/1:8,0:27:13.06:67,0,13	0/0:19,0:18:51.13:0,51,544	1/1:2,13:16:37.99:301,38,0
chr10	97748383	.	CG	C	721.97	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.882;DP=627;FS=0.000;HRun=2;HaplotypeScore=60.1555;InbreedingCoeff=0.9982;MQ=81.47;MQ0=0;MQRankSum=-2.079;QD=30.08;ReadPosRankSum=0.202;VQSLOD=2.9951;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1459	0/0:11,0:11:33.11:0,33,494	0/0:18,0:18:48.11:0,48,644	0/0:18,0:17:33.11:0,33,602	0/0:36,0:36:99:0,108,1536	0/0:24,0:24:72.22:0,72,1037	0/0:11,0:11:33.11:0,33,489	0/0:29,0:29:81.27:0,81,1185	0/0:16,0:16:48.14:0,48,676	0/0:22,0:22:57.19:0,57,836	0/0:22,0:22:66.22:0,66,981	0/0:24,0:24:69.23:0,69,1015	0/0:19,0:19:57.19:0,57,841	0/0:30,0:30:87.23:0,87,1237	0/0:18,0:18:54.17:0,54,782	0/0:27,0:27:81.27:0,81,1212	0/0:25,0:25:72.23:0,72,1054	0/0:13,0:13:39.06:0,39,517	0/0:17,0:17:51.11:0,51,713	0/0:20,0:20:57.14:0,57,776	0/0:26,0:26:78.25:0,78,1146	0/0:27,0:27:81.26:0,81,1194	0/0:22,0:22:63.17:0,63,880	0/0:28,0:28:81.75:0,82,1209	0/0:24,0:24:69.20:0,69,994	1/1:1,23:24:27.23:816,27,0	0/0:22,0:22:66.20:0,66,945	0/0:20,0:20:60.19:0,60,870
chr10	97748606	.	ATGTC	A	4984.15	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.451;DP=650;FS=39.223;HRun=0;HaplotypeScore=112.1188;InbreedingCoeff=0.9794;MQ=85.26;MQ0=0;MQRankSum=-2.778;QD=46.15;ReadPosRankSum=1.407;VQSLOD=2.9761;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:28:63.22:1132,63,0	0/0:10,0:10:30.10:0,30,780	0/0:20,0:20:8.20:0,8,1135	0/0:23,1:24:19.77:0,20,1077	0/0:25,0:25:75.26:0,75,1949	0/0:32,0:32:87.28:0,87,2205	0/0:15,0:15:39.13:0,39,1013	0/0:32,0:32:78.25:0,78,1858	0/0:23,0:23:63.22:0,63,1635	0/0:29,0:29:78.27:0,78,1986	0/0:20,0:20:57.20:0,57,1475	0/0:13,0:13:36.12:0,36,935	0/0:22,0:22:66.23:0,66,1708	0/0:26,0:26:72.25:0,72,1845	0/0:25,0:25:75.24:0,75,1895	1/1:5,23:28:69.24:1240,69,0	0/0:22,0:22:60.18:0,60,1503	1/1:0,22:22:63.22:1133,63,0	0/0:14,0:14:33.11:0,33,857	0/0:22,0:22:60.21:0,60,1554	0/0:29,0:29:78.25:0,78,1930	0/0:23,0:23:63.22:0,63,1625	0/0:20,0:20:60.21:0,60,1559	0/0:27,0:27:75.26:0,75,1949	0/0:23,0:23:63.22:0,63,1597	1/1:2,28:30:84.27:1479,84,0	0/0:29,0:28:81.10:0,81,2037	0/0:17,0:17:48.16:0,48,1245
chr10	97748743	.	CGTCCGCTGTGTA	C	2164.50	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.019;DP=578;FS=8.213;HRun=0;HaplotypeScore=195.9964;InbreedingCoeff=0.9947;MQ=85.08;MQ0=0;MQRankSum=-4.548;QD=69.82;ReadPosRankSum=-0.858;VQSLOD=2.2988;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:87.30:0,87,5283	0/0:14,0:14:42.14:0,42,2563	0/0:17,0:18:43.03:0,43,1772	0/0:19,0:19:27.40:0,27,1479	0/0:25,0:25:72.25:0,72,4059	0/0:28,0:28:81.28:0,81,4483	0/0:19,0:19:57.20:0,57,3323	1/1:5,18:23:54.13:1613,54,0	0/0:19,0:19:57.20:0,57,3310	0/0:27,0:27:75.26:0,75,4223	0/0:11,0:11:30.10:0,30,1836	0/0:21,0:21:63.22:0,63,3503	0/0:21,0:21:60.21:0,60,3333	0/0:23,0:23:63.22:0,63,3745	0/0:16,0:16:48.16:0,48,2931	0/0:16,0:16:48.16:0,48,2931	0/0:39,0:39:99:0,117,6658	0/0:24,0:24:72.23:0,72,4015	0/0:17,0:17:39.13:0,39,2365	0/0:14,0:14:36.12:0,36,2092	0/0:20,0:20:60.21:0,60,3566	0/0:12,0:12:33.11:0,33,1790	0/0:13,0:13:33.11:0,33,1914	0/0:17,0:17:51.18:0,51,2985	0/0:22,0:22:63.22:0,63,3604	0/0:29,0:29:84.29:0,84,4627	0/0:28,0:28:75.26:0,75,4327	1/1:2,6:8:18.06:671,18,0
chr10	97750194	.	AAAC	A	11333.32	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=9.122;DP=648;FS=6.109;HRun=0;HaplotypeScore=113.9168;InbreedingCoeff=0.8220;MQ=66.46;MQ0=7;MQRankSum=3.113;QD=23.71;ReadPosRankSum=3.526;VQSLOD=4.3760;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:81.23:1067,81,0	1/1:1,8:9:24.08:333,24,0	0/0:36,0:23:24.08:0,24,437	0/0:31,0:25:18.03:0,18,344	1/1:3,16:18:39.13:535,39,0	1/1:3,14:17:36.12:500,36,0	1/1:6,21:27:60.20:833,60,0	0/0:31,0:30:54.16:0,54,991	1/1:4,15:19:33.11:458,33,0	0/0:19,0:19:51.17:0,51,994	0/0:15,0:15:36.12:0,36,666	1/1:6,16:22:39.13:542,39,0	1/1:5,23:28:57.19:791,57,0	1/1:5,17:22:39.13:541,39,0	1/1:6,22:29:54.15:729,54,0	0/1:15,0:15:56.67:57,0,113	1/1:10,20:30:51.13:686,51,0	1/1:30,0:30:39.76:631,40,0	1/1:15,7:21:20.93:230,21,0	1/1:7,15:22:45.06:581,45,0	1/1:9,15:24:36.12:500,36,0	1/1:2,19:21:32.66:390,33,0	1/1:3,20:23:48.07:642,48,0	1/1:7,20:28:42.11:562,42,0	0/0:24,0:24:51.15:0,51,978	0/1:17,0:17:32.64:142,0,33	1/1:7,17:24:42.14:583,42,0	0/0:14,0:14:38.87:0,39,728
chr10	97750211	.	AC	A	78.21	PASS	AB=0.764;AC=2;AF=0.036;AN=56;BaseQRankSum=6.461;DP=706;FS=3.673;HRun=1;HaplotypeScore=136.2341;InbreedingCoeff=-0.0296;MQ=60.98;MQ0=9;MQRankSum=-5.972;QD=2.70;ReadPosRankSum=1.231;VQSLOD=-0.0546;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:48.85:0,49,299	0/0:10,0:10:15.61:0,16,88	0/0:44,0:31:87.14:0,87,1157	0/0:33,0:27:77.20:0,77,1006	0/0:23,0:22:38.03:0,38,336	0/0:18,0:17:23.98:0,24,158	0/0:32,0:32:57.28:0,57,484	0/0:33,0:32:96.30:0,96,1412	0/0:20,0:20:28.40:0,28,241	0/0:23,0:23:69.23:0,69,1061	0/0:20,0:20:57.19:0,57,856	0/0:22,0:22:33.90:0,34,288	0/0:31,0:31:42.94:0,43,346	0/0:22,0:22:27.12:0,27,181	0/0:29,0:29:34.09:0,34,234	0/1:12,2:14:1.13:1,0,187	0/0:25,0:25:24.35:0,24,178	0/0:30,0:29:39.59:0,40,277	0/0:27,0:25:64.98:0,65,694	0/0:27,0:27:58.27:0,58,554	0/0:20,0:20:29.28:0,29,237	0/0:27,0:27:64.07:0,64,695	0/0:23,0:23:27.64:0,28,150	0/0:26,0:26:30.26:0,30,244	0/0:27,0:27:78.26:0,78,1198	0/1:7,8:15:99:152,0,167	0/0:28,0:28:49.52:0,50,441	0/0:23,0:23:59.42:0,59,915
chr10	97750212	.	C	CA	219.18	PASS	AB=0.827;AC=2;AF=0.036;AN=56;BaseQRankSum=8.940;DP=707;FS=3.647;HRun=2;HaplotypeScore=136.2995;InbreedingCoeff=0.1613;MQ=61.72;MQ0=9;MQRankSum=-2.593;QD=4.47;ReadPosRankSum=2.029;VQSLOD=0.8154;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:34:71.56:110,0,72	0/0:10,0:10:28.73:0,29,170	0/0:44,0:31:81.19:0,81,965	0/0:30,1:26:32.37:0,32,662	0/0:25,0:24:55.10:0,55,404	0/0:18,0:17:43.12:0,43,273	0/0:33,0:33:89.89:0,90,652	0/0:32,0:31:90.28:0,90,1103	0/0:20,0:20:46.30:0,46,334	0/0:24,0:24:69.22:0,69,854	0/0:20,0:20:57.18:0,57,698	0/0:22,0:22:54.99:0,55,398	0/0:31,0:31:75.04:0,75,516	0/0:22,0:22:48.87:0,49,309	0/0:27,0:28:60:0,60,353	0/1:8,7:15:5.58:198,0,6	0/0:25,0:25:46.48:0,46,284	0/0:29,0:28:60.77:0,61,408	0/0:26,0:24:65.09:0,65,652	0/0:27,0:27:76.05:0,76,648	0/0:20,0:20:49.13:0,49,343	0/0:27,0:27:76.81:0,77,742	0/0:24,0:24:51.61:0,52,312	0/0:26,0:26:51.65:0,52,334	0/0:27,0:27:78.24:0,78,954	0/0:15,0:15:20.58:0,21,188	0/0:28,0:28:66.78:0,67,521	0/0:24,0:24:65.93:0,66,778
chr10	97750214	.	AC	A	681.77	PASS	AB=0.667;AC=5;AF=0.089;AN=56;BaseQRankSum=10.778;DP=705;FS=1.201;HRun=1;HaplotypeScore=132.6973;InbreedingCoeff=0.5991;MQ=63.17;MQ0=9;MQRankSum=-5.947;QD=10.65;ReadPosRankSum=1.802;VQSLOD=1.7980;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,23:33:3.40:568,3,0	0/0:11,0:11:18.61:0,19,127	0/0:43,0:30:74.96:0,75,1148	0/0:30,0:25:62.55:0,63,838	0/0:26,0:25:47.03:0,47,424	0/0:18,0:17:23.98:0,24,157	0/0:33,0:33:60.30:0,60,543	0/0:31,0:30:90.29:0,90,1359	0/0:21,0:21:31.39:0,31,265	0/0:25,0:25:72.24:0,72,1118	0/0:21,0:21:60.17:0,60,888	0/0:23,0:23:36.89:0,37,313	0/0:31,0:31:43.66:0,44,345	0/0:22,0:22:27.14:0,27,185	0/0:29,0:29:34.07:0,34,218	1/1:13,2:15:11.60:95,12,0	0/0:23,0:23:0.77:0,1,98	0/0:29,0:28:36.64:0,37,260	0/0:23,0:21:53.05:0,53,601	0/0:26,0:26:55.29:0,55,550	0/0:20,0:20:29.26:0,29,224	0/0:27,0:27:63.17:0,63,702	0/0:24,0:24:30.65:0,31,192	0/0:25,0:25:27.55:0,28,160	0/0:29,0:29:81.25:0,81,1209	0/1:8,8:16:62.79:131,0,63	0/0:27,0:27:46.78:0,47,443	0/0:24,0:24:63.25:0,63,995
chr10	97750217	.	AC	A	1101.90	PASS	AB=0.649;AC=6;AF=0.107;AN=56;BaseQRankSum=11.236;DP=720;FS=2.257;HRun=1;HaplotypeScore=132.7085;InbreedingCoeff=0.5981;MQ=65.84;MQ0=7;MQRankSum=-3.772;QD=11.60;ReadPosRankSum=0.936;VQSLOD=2.1314;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,23:34:32.88:624,33,0	0/0:11,0:11:18.64:0,19,148	0/0:43,0:32:89.48:0,89,1234	0/0:31,0:25:33.97:0,34,843	0/0:26,0:25:47.06:0,47,458	0/0:19,0:18:26.61:0,27,182	0/0:32,0:32:56.93:0,57,500	0/0:36,0:35:99:0,105,1569	0/0:22,0:22:34.76:0,35,309	0/0:28,0:28:81.27:0,81,1227	0/0:23,0:23:66.22:0,66,1003	0/0:23,0:23:37.25:0,37,314	0/0:32,0:32:42.93:0,43,327	0/0:21,0:21:24.51:0,25,161	0/0:31,0:31:39.90:0,40,283	1/1:14,0:14:9.63:72,10,0	0/0:23,0:23:23.78:0,24,123	0/1:12,17:28:31.79:317,0,32	0/0:21,0:19:49.98:0,50,553	0/0:26,0:26:55.17:0,55,503	0/0:19,0:19:26.63:0,27,195	0/0:28,0:28:64.59:0,65,713	0/0:26,0:26:39.64:0,40,302	0/0:23,0:23:19.94:0,20,90	0/0:28,0:28:81.27:0,81,1241	0/1:9,1:18:30.34:221,0,30	0/0:29,0:29:52.12:0,52,544	0/0:24,0:24:66.12:0,66,1001
chr10	97750219	.	AAC	A	2032.59	PASS	AB=0.981;AC=23;AF=0.411;AN=56;BaseQRankSum=18.503;DP=733;FS=3.291;HRun=0;HaplotypeScore=140.7055;InbreedingCoeff=-0.4363;MQ=67.01;MQ0=5;MQRankSum=-1.531;QD=3.96;ReadPosRankSum=12.744;VQSLOD=0.3261;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:12.16:692,12,0	0/1:12,0:12:29.99:30,0,104	0/0:42,0:32:89.06:0,89,1129	0/0:31,0:25:63.16:0,63,866	0/1:27,0:26:35.92:36,0,279	0/1:20,0:19:48.09:48,0,126	0/1:32,0:32:77.90:78,0,231	0/0:39,0:38:99:0,108,1546	0/1:22,0:22:36.71:37,0,190	0/0:29,0:29:87.27:0,87,1358	0/0:23,0:23:66.20:0,66,1007	0/1:24,0:24:44.34:44,0,216	0/1:31,0:31:78.86:79,0,171	0/1:21,0:21:59.26:59,0,62	0/1:30,0:30:74.49:74,0,143	0/1:14,0:14:33.32:61,0,33	0/1:23,0:23:32.82:75,0,33	0/1:12,17:28:11.47:370,0,11	0/1:20,0:19:19.94:20,0,332	0/1:27,0:27:29.50:30,0,331	0/1:19,0:19:33.30:57,0,33	0/1:28,0:28:25.59:26,0,450	0/1:26,0:26:88.75:89,0,143	1/1:23,0:23:1.98:71,2,0	0/0:28,0:28:78.23:0,78,1239	0/1:19,0:19:48.12:189,0,48	0/1:30,0:30:34.35:34,0,367	0/0:28,0:28:81.15:0,81,1173
chr10	97750770	.	TA	T	687.16	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=5.655;DP=519;FS=8.078;HRun=4;HaplotypeScore=59.3103;InbreedingCoeff=0.3325;MQ=73.42;MQ0=1;MQRankSum=-0.086;QD=9.54;ReadPosRankSum=-0.662;VQSLOD=0.0475;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:48.25:601,48,0	0/0:5,0:5:15.03:0,15,170	0/0:28,0:18:43.58:0,44,358	0/0:18,0:16:9.93:0,10,164	0/0:27,0:27:81.21:0,81,992	0/0:25,0:25:68.84:0,69,804	0/0:8,0:8:15.03:0,15,170	0/0:44,0:44:99:0,111,1336	0/0:19,0:19:55.65:0,56,654	0/0:23,0:23:60.15:0,60,739	0/0:18,0:18:54.17:0,54,690	0/0:16,0:16:45.13:0,45,557	0/0:13,0:13:39.07:0,39,435	0/0:16,0:16:44.86:0,45,530	0/0:15,0:15:45.11:0,45,525	0/1:18,0:18:29.67:62,0,30	0/0:19,0:19:57.11:0,57,701	0/1:13,0:13:9.48:72,0,9	0/0:24,0:24:61.48:0,61,673	0/0:25,0:25:72.21:0,72,904	0/0:13,0:13:33.06:0,33,375	0/0:14,0:14:39.12:0,39,484	0/0:17,0:17:48.99:0,49,569	0/0:15,0:15:6.29:0,6,422	0/0:15,0:15:16.26:0,16,448	0/1:19,0:19:27.47:76,0,27	0/0:23,0:23:59.89:0,60,750	0/0:7,0:7:11.26:0,11,126
chr10	97751053	.	A	AT	738.68	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.025;DP=584;FS=4.060;HRun=7;HaplotypeScore=56.9199;InbreedingCoeff=0.9779;MQ=73.85;MQ0=0;MQRankSum=-1.554;QD=28.41;ReadPosRankSum=1.821;VQSLOD=4.5069;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.09:0,93,882	0/0:8,0:8:21.03:0,21,203	0/0:12,0:11:27.02:0,27,254	0/0:9,0:9:14.96:0,15,130	0/0:40,0:40:99:0,111,1072	0/0:16,0:16:45.07:0,45,433	0/0:18,0:18:51.08:0,51,493	0/0:30,0:31:67.91:0,68,638	0/0:18,0:18:54.08:0,54,516	0/0:27,0:27:78.12:0,78,753	0/0:27,0:27:72.11:0,72,695	0/0:21,0:21:54.08:0,54,521	0/0:20,0:20:57.08:0,57,544	0/0:12,0:12:30.05:0,30,289	0/0:18,0:18:45.06:0,45,435	0/0:17,0:17:51.07:0,51,488	0/0:24,0:24:69.08:0,69,659	1/1:1,25:26:69.21:834,69,0	0/0:17,0:17:39.06:0,39,377	0/0:30,0:30:84.13:0,84,811	0/0:11,0:11:30.03:0,30,283	0/0:18,0:18:51.08:0,51,492	0/0:25,0:25:72.12:0,72,695	0/0:13,0:13:36.05:0,36,348	0/0:30,0:30:78.11:0,78,748	0/0:20,0:20:57.09:0,57,550	0/0:26,0:26:72.11:0,72,695	0/0:18,0:18:36.04:0,36,347
chr10	97752496	.	GGCT	G	1752.39	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.265;DP=691;FS=6.544;HRun=0;HaplotypeScore=94.0667;InbreedingCoeff=0.9992;MQ=80.23;MQ0=0;MQRankSum=-1.379;QD=46.12;ReadPosRankSum=2.586;VQSLOD=5.6237;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,154,3399	0/0:13,0:13:39.13:0,39,842	0/0:17,0:17:51.17:0,51,1072	0/0:23,0:23:69.04:0,69,1273	0/0:18,0:18:48.16:0,48,1050	0/0:23,0:23:69.24:0,69,1522	0/0:19,0:19:51.16:0,51,1134	0/0:26,0:26:72.24:0,72,1605	0/0:20,0:20:60.21:0,60,1358	0/0:32,0:32:93.32:0,93,2068	0/0:29,0:29:81.28:0,81,1802	0/0:12,0:12:36.12:0,36,799	0/0:25,0:25:75.24:0,75,1631	0/0:33,0:33:99:0,99,2220	0/0:28,0:28:81.28:0,81,1824	1/1:0,38:38:99:1847,105,0	0/0:25,0:25:75.26:0,75,1686	0/0:10,0:10:30.10:0,30,662	0/0:20,0:20:57.18:0,57,1168	0/0:30,0:30:87.30:0,87,1938	0/0:36,0:36:99:0,108,2423	0/0:24,0:24:69.24:0,69,1521	0/0:26,0:26:75.26:0,75,1679	0/0:22,0:22:66.23:0,66,1483	0/0:27,0:27:78.25:0,78,1706	0/0:18,0:18:54.19:0,54,1203	0/0:32,0:31:87.26:0,87,1886	0/0:13,0:13:39.09:0,39,784
chr10	97753156	.	GT	G	14522.11	PASS	AC=54;AF=1.000;AN=54;DP=418;FS=0.000;HRun=1;HaplotypeScore=268.9321;InbreedingCoeff=0.4927;MQ=31.45;MQ0=0;QD=34.83;VQSLOD=3.8713;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:39.04:499,39,0	1/1:0,14:14:30.10:418,30,0	1/1:1,0:1:1.25:3,1,0	./.	1/1:0,21:21:45.15:626,45,0	1/1:0,13:13:33.07:438,33,0	1/1:0,16:16:39.09:517,39,0	1/1:0,16:16:42.11:565,42,0	1/1:0,16:16:48.12:647,48,0	1/1:0,22:22:60.20:833,60,0	1/1:0,17:17:42.05:538,42,0	1/1:0,13:13:36.12:501,36,0	1/1:0,17:17:51.04:644,51,0	1/1:0,19:19:57.10:750,57,0	1/1:0,20:20:60.16:814,60,0	1/1:0,17:17:48.12:647,48,0	1/1:0,9:9:21.07:292,21,0	1/1:0,6:6:18.06:251,18,0	1/1:0,9:9:21.07:293,21,0	1/1:0,26:26:60.20:829,60,0	1/1:0,10:10:21.07:292,21,0	1/1:0,23:23:51.17:709,51,0	1/1:0,23:23:60.20:835,60,0	1/1:0,11:11:30.10:418,30,0	1/1:0,24:24:57.15:772,57,0	1/1:0,22:22:60.15:804,60,0	1/1:0,13:13:33.11:460,33,0	1/1:0,3:3:9.03:125,9,0
chr10	97754300	.	GC	G	9223.58	PASS	AC=54;AF=0.964;AN=56;BaseQRankSum=2.100;DP=627;FS=11.263;HRun=1;HaplotypeScore=112.0638;InbreedingCoeff=0.6749;MQ=75.15;MQ0=0;MQRankSum=-2.235;QD=14.83;ReadPosRankSum=5.792;VQSLOD=3.5276;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:79.28:480,79,0	1/1:11,0:11:30.64:184,31,0	1/1:16,3:19:37.12:298,37,0	0/0:3,1:5:0.39:0,0,60	1/1:26,0:26:71.88:440,72,0	1/1:21,0:21:53.22:315,53,0	1/1:17,0:17:35:200,35,0	1/1:33,0:33:91.11:457,91,0	1/1:17,0:17:46.85:275,47,0	1/1:27,0:27:40.52:309,41,0	1/1:19,0:19:54.06:324,54,0	1/1:24,0:24:67.32:395,67,0	1/1:21,0:21:61.50:361,61,0	1/1:24,0:24:64.36:374,64,0	1/1:31,0:31:45.31:367,45,0	1/1:27,0:27:75.99:439,76,0	1/1:26,0:26:61.65:373,62,0	1/1:14,0:13:38.10:226,38,0	1/1:23,0:23:33.92:260,34,0	1/1:31,0:31:90.89:543,91,0	1/1:10,0:10:29.27:172,29,0	1/1:19,0:19:30.10:277,30,0	1/1:24,0:24:36.62:324,37,0	1/1:12,0:12:29.30:173,29,0	1/1:38,0:38:84.82:583,85,0	1/1:27,0:27:52.48:360,52,0	1/1:32,0:32:85.17:516,85,0	1/1:13,0:13:32.35:199,32,0
chr10	97754879	.	A	AC	1890.77	PASS	AB=0.579;AC=8;AF=0.143;AN=56;BaseQRankSum=-7.799;DP=506;FS=0.000;HRun=8;HaplotypeScore=63.6858;InbreedingCoeff=0.7348;MQ=89.35;MQ0=0;MQRankSum=-1.401;QD=18.54;ReadPosRankSum=-2.316;VQSLOD=2.8872;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,15:19:36.11:415,36,0	0/0:6,0:6:12:0,12,110	0/0:22,0:22:21.16:0,21,329	0/0:17,0:17:23.96:0,24,219	0/0:15,0:15:26.97:0,27,246	0/0:27,0:27:66.01:0,66,601	0/0:15,0:16:35.03:0,35,301	0/1:16,27:43:52.77:681,0,53	0/0:16,0:16:42.01:0,42,380	0/0:17,0:17:45.02:0,45,410	0/0:23,0:23:29.96:0,30,272	0/0:20,0:20:50.97:0,51,466	0/0:19,0:19:54.02:0,54,494	0/0:14,0:14:36.01:0,36,329	0/0:14,0:14:36.01:0,36,329	0/0:23,0:23:63.02:0,63,572	0/0:16,0:16:33:0,33,302	1/1:1,10:11:30.09:345,30,0	0/0:15,2:17:4.37:0,4,289	0/0:17,0:17:29.99:0,30,274	0/0:14,0:14:36.01:0,36,329	0/0:9,0:9:11.97:0,12,109	0/0:18,0:18:35.98:0,36,324	0/0:12,0:12:20.98:0,21,187	0/0:23,0:23:50.95:0,51,453	1/1:3,0:10:17.37:102,17,0	0/0:28,0:29:68.05:0,68,609	0/1:3,16:19:0.77:500,0,1
chr10	97755319	.	A	ATG	584.16	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=9.198;DP=699;FS=6.809;HRun=0;HaplotypeScore=143.1628;InbreedingCoeff=0.8103;MQ=64.86;MQ0=5;MQRankSum=-5.389;QD=4.79;ReadPosRankSum=-5.873;VQSLOD=0.1883;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:26,22:48:29.84:414,30,0	0/0:10,0:11:23.91:0,24,271	0/0:36,0:26:48.05:0,48,530	0/0:38,0:23:16.75:0,17,369	0/0:20,0:20:48.13:0,48,572	0/0:16,0:16:35.98:0,36,439	0/0:24,0:24:54.17:0,54,657	0/1:25,0:25:1.07:1,0,383	0/0:27,0:27:72.11:0,72,847	0/0:17,0:17:30.09:0,30,365	0/0:11,0:11:30.09:0,30,365	0/0:25,0:25:36.32:0,36,571	0/0:20,0:20:42.13:0,42,511	0/0:27,0:27:66.21:0,66,805	0/0:34,0:34:78.24:0,78,950	0/0:34,0:35:39.78:0,40,603	0/0:38,0:38:90.28:0,90,1097	1/1:13,0:13:2:68,2,0	0/0:30,0:30:42.08:0,42,482	0/0:14,0:14:39.10:0,39,454	0/0:52,0:53:99:0,108,1276	0/0:11,0:11:27.07:0,27,318	0/0:11,0:11:18.06:0,18,220	0/0:43,0:44:99:0,108,1251	0/0:5,0:5:12.04:0,12,147	1/1:36,0:34:30.65:233,31,0	0/0:13,0:13:24.01:0,24,292	0/0:14,0:14:33.10:0,33,403
chr10	97755336	.	A	AGT	169.81	PASS	AB=0.939;AC=5;AF=0.089;AN=56;BaseQRankSum=8.388;DP=769;FS=15.021;HRun=0;HaplotypeScore=139.4819;InbreedingCoeff=0.2683;MQ=55.59;MQ0=17;MQRankSum=-4.039;QD=1.16;ReadPosRankSum=-4.853;VQSLOD=-0.3581;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:49,0:49:5.78:31,6,0	0/0:11,0:11:30.09:0,30,375	0/0:44,0:21:29.25:0,29,393	0/0:64,0:24:26.91:0,27,367	0/0:21,0:21:54.17:0,54,693	0/0:19,0:19:44.99:0,45,560	0/0:26,0:26:66.18:0,66,817	0/0:27,0:26:38.66:0,39,769	0/0:30,0:30:81.24:0,81,1020	0/0:19,0:18:48.16:0,48,615	0/0:11,0:11:27.09:0,27,347	0/0:26,0:26:75.23:0,75,946	0/0:17,0:17:48.14:0,48,597	0/0:33,0:33:90.26:0,90,1127	0/0:31,0:31:84.23:0,84,1036	0/1:28,8:36:35.77:36,0,409	0/0:37,0:37:93.11:0,93,1159	0/1:23,0:22:20.79:84,0,21	0/0:16,0:16:21:0,21,249	0/0:20,0:20:42.12:0,42,522	0/0:57,0:54:99:0,143,1796	0/0:14,0:14:33.11:0,33,424	0/0:9,0:9:27.09:0,27,346	0/0:49,0:49:99:0,126,1582	0/0:8,0:8:21.05:0,21,253	0/1:37,0:35:97.47:134,0,97	0/0:16,0:16:42.09:0,42,524	0/0:18,0:18:51.15:0,51,641
chr10	97755337	.	G	GTGTGTGTGTC	2779.13	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=8.456;DP=777;FS=2.249;HRun=0;HaplotypeScore=238.6601;InbreedingCoeff=0.8676;MQ=56.19;MQ0=17;MQRankSum=-6.888;QD=18.65;ReadPosRankSum=-3.688;VQSLOD=2.3196;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:42,7:49:21.12:323,21,0	0/0:11,0:11:33.09:0,33,854	0/0:44,0:21:15.95:0,16,588	0/0:64,0:25:36.22:0,36,390	0/0:21,0:21:60.12:0,60,1439	0/0:19,0:19:42.13:0,42,1025	0/0:26,0:26:57.17:0,57,1450	0/0:27,0:26:63.18:0,63,1320	0/0:31,0:31:77.76:0,78,2075	0/0:18,0:17:48.15:0,48,1125	0/0:12,0:12:27.04:0,27,678	0/0:26,0:26:69.24:0,69,1717	0/0:18,0:18:42.13:0,42,1146	0/0:34,0:34:90.31:0,90,2343	0/0:31,0:31:77.84:0,78,1994	1/1:37,0:37:25.03:1022,25,0	0/0:37,0:37:87.23:0,87,2505	1/1:23,0:22:42.10:513,42,0	0/0:17,0:17:8.96:0,9,346	0/0:18,0:18:42.13:0,42,1012	0/0:58,0:55:99:0,132,3634	0/0:13,0:13:36.11:0,36,948	0/0:9,0:9:27.08:0,27,713	0/0:48,0:48:99:0,120,3133	0/0:9,0:9:21.07:0,21,516	0/1:40,0:37:3.54:1069,0,4	0/0:16,0:16:41.63:0,42,859	0/0:18,0:18:51.17:0,51,1205
chr10	97755880	.	GT	G	364.81	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.936;DP=501;FS=3.478;HRun=7;HaplotypeScore=50.4055;InbreedingCoeff=0.9452;MQ=79.89;MQ0=0;MQRankSum=-2.360;QD=18.24;ReadPosRankSum=0.439;VQSLOD=3.2655;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.21:0,66,826	0/0:6,0:6:18.06:0,18,226	0/0:19,0:19:41.05:0,41,500	0/0:11,0:11:23.65:0,24,264	0/0:22,0:22:57.15:0,57,679	0/0:24,0:24:69.22:0,69,868	0/0:12,0:12:36.12:0,36,453	0/0:37,0:37:93.24:0,93,1118	0/0:11,0:11:33.11:0,33,415	0/0:17,0:17:51.16:0,51,642	0/0:23,0:23:69.21:0,69,854	0/0:18,0:18:51.16:0,51,640	0/0:14,0:14:39.12:0,39,490	0/0:7,0:7:21.07:0,21,264	0/0:16,0:16:48.15:0,48,601	1/1:1,19:20:13.37:452,13,0	0/0:21,0:21:60.19:0,60,755	0/0:19,0:19:49.17:0,49,269	0/0:18,0:18:51.15:0,51,616	0/0:21,0:21:60.17:0,60,731	0/0:23,0:23:60.18:0,60,740	0/0:16,0:16:42.13:0,42,528	0/0:17,0:17:45.12:0,45,540	0/0:17,0:17:45.13:0,45,552	0/0:16,0:16:48.13:0,48,579	0/0:14,0:14:14.52:0,15,213	0/0:22,0:22:63.18:0,63,766	0/0:16,0:16:48.15:0,48,604
chr10	97756907	.	CT	C	202.75	PASS	AB=0.897;AC=3;AF=0.054;AN=56;BaseQRankSum=6.286;DP=568;FS=0.000;HRun=10;HaplotypeScore=63.2632;InbreedingCoeff=0.4695;MQ=77.24;MQ0=0;MQRankSum=0.631;QD=4.83;ReadPosRankSum=0.224;VQSLOD=0.6097;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:41.05:0,41,654	0/0:6,0:6:18.01:0,18,180	0/0:25,1:23:9.76:0,10,225	0/0:19,1:15:28.13:0,28,194	0/0:18,2:20:25.08:0,25,505	0/0:19,2:21:31.09:0,31,563	0/0:22,0:23:54.44:0,54,570	0/0:24,0:24:63.17:0,63,696	0/0:15,0:15:45.08:0,45,472	0/0:18,0:18:51.14:0,51,564	0/0:11,1:13:3.87:0,4,254	0/0:17,0:17:42.10:0,42,456	0/0:15,0:15:45.11:0,45,490	0/0:16,0:16:45.11:0,45,491	0/0:25,0:25:72.04:0,72,761	1/1:2,14:16:5.83:279,6,0	0/0:18,1:19:28.09:0,28,536	0/0:20,0:20:54.12:0,54,586	0/1:23,3:26:14.90:15,0,502	0/0:28,2:30:43.16:0,43,702	0/0:20,0:23:39.89:0,40,480	0/0:15,0:15:39.10:0,39,424	0/0:14,0:14:25.03:0,25,397	0/0:23,1:24:37.12:0,37,636	0/0:17,0:17:45.10:0,45,483	0/0:25,0:25:66.17:0,66,723	0/0:25,0:25:69.17:0,69,754	0/0:25,0:25:72.19:0,72,796
chr10	97760521	.	TTG	T	756.19	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.475;DP=454;FS=5.476;HRun=0;HaplotypeScore=56.5319;InbreedingCoeff=0.9010;MQ=64.07;MQ0=0;MQRankSum=-6.377;QD=22.24;ReadPosRankSum=-1.363;VQSLOD=3.1171;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.13:0,39,792	0/0:9,0:9:27.09:0,27,548	0/0:4,0:4:11.07:0,11,157	0/0:4,0:4:6.02:0,6,110	0/0:25,0:25:75.25:0,75,1451	0/0:23,0:23:69.24:0,69,1402	0/0:3,0:3:9.03:0,9,164	1/1:1,19:20:55.16:379,55,0	0/0:21,0:21:63.20:0,63,1233	0/0:24,0:24:72.25:0,72,1456	0/0:25,0:25:75.26:0,75,1480	0/0:11,0:11:33.11:0,33,659	0/0:19,0:19:57.20:0,57,1147	0/0:20,0:20:60.21:0,60,1208	0/0:19,0:19:57.20:0,57,1137	0/0:17,0:17:51.18:0,51,1026	0/0:7,0:7:21.07:0,21,415	0/0:10,0:10:30.10:0,30,589	0/0:11,0:11:33.11:0,33,671	0/0:30,0:30:87.29:0,87,1722	0/0:8,0:8:24.08:0,24,477	0/0:14,0:14:42.14:0,42,828	0/0:19,0:19:57.20:0,57,1137	0/0:9,0:9:27.08:0,27,514	0/0:23,0:23:69.24:0,69,1360	0/0:23,0:23:69.24:0,69,1395	0/0:29,0:29:87.29:0,87,1705	1/1:13,1:14:41.34:498,41,0
chr10	97760525	.	T	TCA	1519.43	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.954;DP=472;FS=3.718;HRun=0;HaplotypeScore=58.0036;InbreedingCoeff=0.8720;MQ=62.29;MQ0=0;MQRankSum=-7.780;QD=31.65;ReadPosRankSum=-2.461;VQSLOD=4.7111;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.13:0,39,633	0/0:10,0:10:30.09:0,30,463	0/0:4,0:4:12.04:0,12,171	0/0:3,0:3:3.01:0,3,49	0/0:25,0:25:75.24:0,75,1191	0/0:25,0:25:72.23:0,72,1151	0/0:3,0:3:9.03:0,9,147	1/1:10,19:29:86.52:975,87,0	0/0:20,0:20:57.19:0,57,930	0/0:24,0:24:72.25:0,72,1167	0/0:24,0:24:72.21:0,72,1119	0/0:10,0:10:30.10:0,30,489	0/0:21,0:21:60.20:0,60,969	0/0:20,0:20:60.20:0,60,979	0/0:18,0:18:54.18:0,54,881	0/0:17,0:17:51.17:0,51,832	0/0:7,0:7:18.06:0,18,294	0/0:13,0:13:36.12:0,36,573	0/0:13,0:13:36.12:0,36,581	0/0:29,0:29:87.28:0,87,1384	0/0:7,0:7:21.07:0,21,343	0/0:13,0:13:39.13:0,39,636	0/0:20,0:20:57.18:0,57,902	0/0:8,0:8:24.08:0,24,392	0/0:23,0:23:66.18:0,66,1025	0/0:25,0:25:69.24:0,69,1121	0/0:29,0:29:87.28:0,87,1391	1/1:18,1:19:42.09:666,42,0
chr10	97761710	.	CAT	C	135.50	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=4.465;DP=507;FS=5.454;HRun=0;HaplotypeScore=63.8525;InbreedingCoeff=0.8896;MQ=66.16;MQ0=0;MQRankSum=-3.621;QD=12.32;ReadPosRankSum=-1.023;VQSLOD=2.2253;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,8:11:18.06:226,18,0	0/0:7,0:7:15.05:0,15,253	./.	0/0:13,1:11:15.81:0,16,171	0/0:30,0:30:87.27:0,87,1415	0/0:17,0:17:42.14:0,42,709	0/0:11,0:11:30.10:0,30,503	0/0:38,0:38:90.28:0,90,1448	0/0:23,0:23:57.20:0,57,961	0/0:40,0:40:99:0,108,1790	0/0:29,1:30:42.72:0,43,1278	0/0:20,0:20:54.17:0,54,885	0/0:20,0:20:54.18:0,54,911	0/0:15,0:15:39.13:0,39,651	0/0:18,0:18:42.14:0,42,709	0/0:14,0:14:30.10:0,30,505	0/0:9,0:9:21.07:0,21,354	0/0:15,0:15:36.12:0,36,607	0/0:18,0:18:45.15:0,45,759	0/0:33,0:33:90.31:0,90,1515	0/0:19,0:19:45.15:0,45,754	0/0:4,0:4:12.04:0,12,202	0/0:11,0:11:30.09:0,30,481	0/0:8,0:8:12.04:0,12,202	0/0:20,0:20:25.70:0,26,832	0/0:19,0:19:45.15:0,45,759	0/0:32,0:32:81.26:0,81,1317	0/0:6,0:6:15.05:0,15,253
chr10	97761726	.	C	CAT	394.42	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=6.581;DP=500;FS=0.937;HRun=0;HaplotypeScore=63.0838;InbreedingCoeff=0.4850;MQ=66.13;MQ0=1;MQRankSum=-2.092;QD=10.11;ReadPosRankSum=0.292;VQSLOD=3.0845;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:10:22.09:90,0,22	0/0:9,0:9:27.09:0,27,434	0/1:4,0:3:0:0,0,0	0/1:11,0:9:11.33:11,0,62	0/0:32,0:32:93.27:0,93,1444	0/0:19,0:19:57.06:0,57,829	0/0:11,0:11:33.05:0,33,478	0/0:35,0:35:96.26:0,96,1473	0/0:20,0:20:57.18:0,57,889	0/0:37,0:37:99:0,108,1719	0/0:35,0:35:99:0,102,1567	0/0:21,0:21:39.34:0,39,853	0/0:21,0:21:57.19:0,57,925	0/0:11,0:11:33.11:0,33,534	0/0:22,0:22:66.19:0,66,1026	1/1:2,11:13:24.08:405,24,0	0/0:7,0:7:18.06:0,18,276	0/0:13,0:13:33.11:0,33,532	0/0:19,0:19:54.17:0,54,839	0/0:36,0:36:99:0,108,1713	0/0:15,0:15:42.14:0,42,664	0/0:5,0:5:15.03:0,15,219	0/0:10,0:10:30.10:0,30,482	0/0:6,0:6:15.05:0,15,241	0/0:19,0:19:57.15:0,57,873	0/0:18,0:18:54.18:0,54,858	0/0:31,0:31:87.28:0,87,1374	0/0:9,0:9:18.06:0,18,293
chr10	97762154	.	T	TGG	452.01	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.617;DP=515;FS=1.645;HRun=8;HaplotypeScore=67.8506;InbreedingCoeff=0.9354;MQ=79.84;MQ0=0;MQRankSum=-0.720;QD=13.29;ReadPosRankSum=-0.573;VQSLOD=0.4669;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.14:0,63,690	0/0:11,0:11:24.04:0,24,267	0/0:22,0:23:35.49:0,35,423	0/0:19,0:19:36.97:0,37,425	0/0:12,0:12:33.09:0,33,367	0/0:28,0:28:66.15:0,66,731	0/0:13,0:13:39.11:0,39,434	0/0:37,0:38:89.93:0,90,981	0/0:25,0:25:69.11:0,69,745	0/0:19,0:19:54.13:0,54,600	0/0:5,0:5:15.04:0,15,167	0/0:19,0:19:45.09:0,45,502	0/0:16,0:16:32.31:0,32,366	0/0:16,0:16:39:0,39,409	0/0:20,0:20:57.12:0,57,621	0/0:25,0:25:72.18:0,72,793	0/0:23,0:23:60.15:0,60,668	1/1:3,0:16:31.19:106,31,0	0/0:18,0:18:39.06:0,39,427	0/0:17,0:17:39.04:0,39,416	0/0:34,0:34:75.14:0,75,826	0/0:5,0:5:12.03:0,12,134	0/0:7,0:7:15.03:0,15,167	0/0:20,0:20:60.16:0,60,668	0/0:7,0:7:18.04:0,18,201	1/1:4,10:18:34.94:467,35,0	0/0:34,0:33:99:0,99,1084	0/0:3,0:3:9.02:0,9,100
chr10	97764746	.	TTG	T	382.16	PASS	AB=0.936;AC=20;AF=0.385;AN=52;BaseQRankSum=5.849;DP=556;FS=0.000;HRun=0;HaplotypeScore=82.6460;InbreedingCoeff=-0.1867;MQ=59.68;MQ0=13;MQRankSum=-1.490;QD=1.15;ReadPosRankSum=0.770;VQSLOD=1.3612;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:33:34.25:38,0,34	0/0:7,0:6:9.03:0,9,132	./.	./.	0/1:15,7:23:80.36:80,0,165	0/0:21,0:22:12.85:0,13,277	0/1:24,1:24:21.74:22,0,358	0/0:26,0:25:2.94:0,3,18	0/0:25,0:24:29.57:0,30,350	0/1:17,2:19:38.97:39,0,195	0/0:10,0:11:18.01:0,18,197	0/1:16,0:15:8.57:9,0,233	0/0:15,0:16:15.05:0,15,224	0/1:12,0:13:12.57:13,0,36	0/1:17,1:18:32.16:32,0,258	1/1:5,0:12:11.36:56,11,0	0/0:28,0:28:30.07:0,30,422	0/1:21,0:23:2.04:2,0,175	0/1:12,1:10:31.72:32,0,116	0/1:24,4:28:6.62:7,0,315	0/0:31,0:31:16.05:0,16,268	0/1:13,0:14:13:13,0,115	0/1:30,0:29:34.51:35,0,301	0/0:22,0:22:0.69:0,1,361	0/1:14,0:14:1.73:2,0,283	1/1:24,0:24:22.61:118,23,0	0/1:18,1:19:29.05:29,0,183	1/1:4,0:5:0.07:9,0,0
chr10	97764787	.	TGTGC	T	820.53	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=8.824;DP=558;FS=9.758;HRun=0;HaplotypeScore=103.8388;InbreedingCoeff=0.1181;MQ=59.14;MQ0=25;MQRankSum=-1.647;QD=5.58;ReadPosRankSum=-2.026;VQSLOD=0.9631;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:33:50.24:50,0,190	0/0:6,0:5:15.02:0,15,267	0/1:24,0:12:1.16:1,0,134	0/0:28,0:14:8.38:0,8,178	0/0:32,0:32:54.45:0,54,1064	0/0:25,0:24:42.97:0,43,790	0/0:24,0:23:13.74:0,14,765	0/0:21,0:19:51.37:0,51,433	0/0:23,0:22:50.89:0,51,893	0/0:20,0:21:45.75:0,46,796	0/0:20,0:20:51.02:0,51,784	0/0:12,0:11:33.04:0,33,528	0/0:13,0:13:27:0,27,463	0/1:5,0:5:19.65:20,0,120	0/0:23,0:23:29.10:0,29,752	0/1:14,0:14:9.21:9,0,137	0/0:26,0:26:51.99:0,52,1097	0/1:23,0:22:99:190,0,186	0/1:16,0:12:8.68:9,0,354	0/0:24,0:24:55.66:0,56,891	0/0:23,0:23:32.90:0,33,764	0/0:13,0:13:35.84:0,36,516	0/0:28,0:27:67.92:0,68,1097	0/0:18,0:17:44.69:0,45,816	0/0:13,0:13:35.94:0,36,649	1/1:5,15:20:27.91:672,28,0	0/0:18,0:18:24.52:0,25,582	0/1:9,0:8:1.49:1,0,38
chr10	97766491	.	A	AT	1386.28	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-7.672;DP=434;FS=3.696;HRun=7;HaplotypeScore=41.0462;InbreedingCoeff=0.9406;MQ=69.96;MQ0=0;MQRankSum=-0.670;QD=24.32;ReadPosRankSum=-0.217;VQSLOD=3.4886;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:18.06:217,18,0	0/0:2,0:2:6:0,6,54	0/0:8,0:7:14.85:0,15,113	0/0:9,0:7:13.41:0,13,115	0/0:24,0:24:66.07:0,66,624	0/0:17,0:17:51.08:0,51,492	0/0:10,0:10:24.01:0,24,225	0/0:35,0:35:75.07:0,75,713	0/0:7,0:7:18.03:0,18,174	0/0:21,0:21:57.03:0,57,536	0/0:24,0:24:63.10:0,63,608	0/0:14,0:14:36.05:0,36,347	0/0:13,0:13:39.01:0,39,363	0/0:9,0:9:27.04:0,27,257	0/0:17,0:17:48.05:0,48,452	1/1:3,13:15:30.09:362,30,0	0/0:18,0:18:48.07:0,48,463	1/1:1,17:18:29.95:492,30,0	0/0:26,0:26:69.10:0,69,662	0/0:22,0:22:66.10:0,66,633	0/0:4,0:4:12.02:0,12,116	0/0:8,0:8:21.03:0,21,203	0/0:21,0:21:63.09:0,63,603	0/0:7,0:7:18.02:0,18,169	0/0:16,0:16:45.06:0,45,429	1/1:3,13:16:16.16:473,16,0	0/0:26,0:26:78.10:0,78,746	0/0:19,0:19:46.30:0,46,436
chr10	97766907	.	G	GT	547.88	PASS	AB=0.941;AC=5;AF=0.089;AN=56;BaseQRankSum=-6.610;DP=455;FS=2.736;HRun=9;HaplotypeScore=45.9660;InbreedingCoeff=0.4077;MQ=75.37;MQ0=0;MQRankSum=0.118;QD=8.84;ReadPosRankSum=2.921;VQSLOD=1.2140;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:32.97:0,33,283	0/0:10,0:10:26.99:0,27,234	0/1:13,0:13:9.09:9,0,135	0/0:12,0:12:18.26:0,18,137	0/0:20,0:20:47.98:0,48,417	0/0:14,0:13:32.98:0,33,287	0/0:9,0:9:26.98:0,27,230	0/0:22,0:22:47.95:0,48,411	0/0:19,0:19:44.98:0,45,391	0/0:27,0:27:65.97:0,66,573	0/0:21,0:21:62.99:0,63,547	0/0:13,0:13:32.99:0,33,287	0/0:13,0:13:35.99:0,36,313	0/0:8,0:8:24:0,24,208	0/0:20,0:20:50.98:0,51,443	1/1:5,23:28:37.11:638,37,0	0/1:8,1:9:9.17:9,0,158	0/0:22,0:22:56.95:0,57,489	0/0:24,1:25:20.77:0,21,409	0/0:24,0:25:65.01:0,65,553	0/0:7,0:7:11.99:0,12,104	0/1:11,1:12:0.19:0,0,227	0/0:22,0:22:56.97:0,57,495	0/0:7,0:7:17.98:0,18,152	0/0:13,0:13:32.98:0,33,286	0/0:20,0:20:47.97:0,48,417	0/0:21,0:20:53.96:0,54,464	0/0:10,0:10:29.99:0,30,260
chr10	97767478	.	GGT	G	463.66	PASS	AB=0.882;AC=15;AF=0.268;AN=56;BaseQRankSum=6.572;DP=508;FS=0.670;HRun=0;HaplotypeScore=70.6563;InbreedingCoeff=-0.0284;MQ=60.49;MQ0=15;MQRankSum=-0.068;QD=2.00;ReadPosRankSum=-0.553;VQSLOD=1.6194;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:28:8.94:0,9,64	0/1:7,2:9:22.46:22,0,127	0/1:29,0:9:2.61:3,0,38	0/0:23,0:7:6.02:0,6,70	0/0:22,2:24:19.67:0,20,724	0/0:24,0:24:27.63:0,28,750	0/0:11,0:11:21.07:0,21,326	1/1:16,0:27:30.22:144,30,0	0/1:8,1:9:7.41:7,0,343	0/1:16,3:18:72.98:73,0,287	0/1:19,2:21:26.84:27,0,516	0/0:18,2:20:10.66:0,11,613	0/0:13,0:12:24.08:0,24,372	0/0:9,0:9:18.06:0,18,279	0/0:21,0:21:54.18:0,54,836	0/0:12,0:17:5.95:0,6,46	0/1:15,3:18:38.89:39,0,331	0/0:7,0:19:36.01:0,36,346	0/1:16,1:14:45.36:45,0,203	0/1:13,6:19:99:124,0,463	0/0:11,0:11:18.06:0,18,263	0/1:9,1:10:10.42:10,0,279	0/1:13,3:16:38.88:39,0,342	0/0:18,0:17:48.15:0,48,724	0/1:23,3:26:20.83:21,0,603	0/0:14,0:18:35.43:0,35,253	0/0:17,1:18:1.63:0,2,467	1/1:5,0:10:14.20:70,14,0
chr10	97767507	.	G	GT	234.77	PASS	AB=0.740;AC=2;AF=0.036;AN=56;BaseQRankSum=4.325;DP=557;FS=10.137;HRun=1;HaplotypeScore=72.2102;InbreedingCoeff=-0.0404;MQ=67.19;MQ0=14;MQRankSum=-3.664;QD=5.87;ReadPosRankSum=0.497;VQSLOD=-0.3552;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,5:28:38.98:0,39,438	0/0:12,0:12:33.07:0,33,426	0/0:44,0:21:56.62:0,57,694	0/0:30,0:11:21.43:0,21,254	0/0:23,0:23:66.19:0,66,890	0/0:33,0:33:93.04:0,93,1240	0/0:13,0:13:36.09:0,36,494	0/0:27,0:27:71.89:0,72,756	0/0:12,0:12:36.09:0,36,474	0/0:17,0:16:44.10:0,44,526	0/0:14,0:14:42.07:0,42,546	0/0:21,0:21:60.17:0,60,807	0/0:12,0:11:33.09:0,33,438	0/0:11,0:11:27.09:0,27,362	0/0:23,0:23:69.23:0,69,951	0/1:14,7:21:14.71:15,0,347	0/0:18,0:18:51.07:0,51,634	0/0:19,1:20:6.58:0,7,222	0/0:19,0:16:44.32:0,44,544	0/0:24,0:24:69.02:0,69,828	0/0:12,0:12:33.11:0,33,448	0/0:13,0:13:36.04:0,36,450	0/0:17,0:17:42.07:0,42,538	0/0:21,0:21:59.43:0,59,827	0/0:22,0:22:60:0,60,781	0/1:12,7:19:99:306,0,350	0/0:22,0:21:60.13:0,60,766	0/0:8,0:7:17.89:0,18,145
chr10	97769111	.	TTGTGTGTGTGTG	T	928.44	PASS	AB=0.758;AC=5;AF=0.089;AN=56;BaseQRankSum=5.996;DP=705;FS=3.629;HRun=0;HaplotypeScore=223.1171;InbreedingCoeff=0.2591;MQ=63.81;MQ0=23;MQRankSum=-3.538;QD=8.00;ReadPosRankSum=-0.849;VQSLOD=2.1972;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:5.97:88,6,0	0/0:14,0:14:24.07:0,24,860	0/1:49,0:26:9.27:9,0,39	0/0:51,0:25:12.93:0,13,120	0/0:21,0:21:34.04:0,34,1326	0/0:26,0:25:45.15:0,45,2053	0/0:28,0:27:39.13:0,39,1500	0/0:37,0:34:24.06:0,24,638	0/0:27,0:27:51.56:0,52,1784	0/0:40,0:38:72.16:0,72,2764	0/0:24,0:24:24.05:0,24,788	0/0:21,0:21:48.16:0,48,2239	0/0:16,0:16:34.35:0,34,1298	0/0:15,0:15:24.07:0,24,773	0/0:20,0:20:42.14:0,42,2101	0/1:5,0:15:32.22:32,0,167	0/0:13,0:12:9.03:0,9,354	0/0:9,0:9:16.53:0,17,236	0/0:23,0:19:30.10:0,30,1347	0/0:24,0:23:33.57:0,34,1421	0/0:36,0:34:48.28:0,48,1851	0/0:35,0:33:39.61:0,40,1855	0/0:25,0:25:33.58:0,34,1550	0/0:31,0:30:36.11:0,36,1554	0/0:17,0:17:27.07:0,27,1187	0/1:17,14:32:67.18:911,0,67	0/0:27,0:26:54.19:0,54,2307	0/0:8,0:7:15.05:0,15,790
chr10	97769144	.	TGA	T	164.55	PASS	AB=0.983;AC=15;AF=0.288;AN=52;BaseQRankSum=-0.799;DP=563;FS=24.264;HRun=0;HaplotypeScore=109.8995;InbreedingCoeff=-0.2448;MQ=46.49;MQ0=43;MQRankSum=1.116;QD=0.55;ReadPosRankSum=-1.847;VQSLOD=0.3519;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:14:2.50:9,2,0	0/0:10,0:10:11.98:0,12,123	./.	./.	0/0:19,1:19:11.77:0,12,84	0/0:29,0:28:32.91:0,33,278	0/1:27,0:23:14.01:14,0,40	0/0:26,0:16:15.80:0,16,75	0/0:23,0:23:21.83:0,22,173	0/0:25,0:23:6.49:0,6,124	0/0:20,0:19:18.46:0,18,167	0/1:17,0:17:4.25:4,0,126	0/0:17,0:17:9.70:0,10,161	0/1:19,0:18:61.51:62,0,170	0/1:20,4:24:3.24:3,0,201	0/0:21,0:19:3.84:0,4,21	0/1:14,0:12:33.35:33,0,41	0/1:11,0:9:10.36:10,0,72	0/1:21,0:12:12.18:12,0,16	0/1:23,0:21:12.36:12,0,63	0/1:30,0:27:48.71:87,0,49	0/1:29,0:26:15.13:28,0,15	0/1:23,2:25:19.21:19,0,44	0/0:30,0:26:17.99:0,18,169	0/0:13,0:12:8.67:0,9,55	0/0:28,0:26:28.33:0,28,169	0/1:27,0:25:3.15:3,0,214	0/1:12,0:10:6.01:6,0,45
chr10	97769183	.	GAC	G	723.20	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=6.372;DP=614;FS=13.952;HRun=0;HaplotypeScore=97.9432;InbreedingCoeff=0.4627;MQ=56.78;MQ0=35;MQRankSum=-3.379;QD=5.24;ReadPosRankSum=-6.296;VQSLOD=-0.6498;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:18,2:17:8.73:74,9,0	0/0:10,0:10:24:0,24,278	0/1:33,0:11:13.72:14,0,122	0/0:47,0:14:1.83:0,2,78	0/0:21,0:20:38.97:0,39,388	0/0:22,0:22:50.99:0,51,606	0/0:20,0:17:25.81:0,26,259	1/1:37,0:32:71.87:536,72,0	0/0:16,2:18:7.92:0,8,359	0/1:22,0:21:21.46:21,0,447	0/0:15,0:15:29.99:0,30,365	0/0:19,0:19:25.64:0,26,234	0/0:17,0:17:7.47:0,7,433	0/0:22,0:21:46.92:0,47,485	0/0:23,0:23:36.29:0,36,463	0/0:21,0:20:4.92:0,5,166	0/0:10,0:9:0.74:0,1,148	0/1:11,0:9:27.27:30,0,27	0/0:13,0:9:22.90:0,23,189	0/0:24,0:22:39.39:0,39,366	0/0:33,0:30:46.34:0,46,402	0/0:23,1:22:45.53:0,46,402	0/0:23,0:23:26.89:0,27,228	0/0:26,0:22:27.91:0,28,363	0/0:12,0:11:23.36:0,23,211	0/0:25,0:23:17.64:0,18,421	0/0:31,0:29:73.64:0,74,643	1/1:13,0:12:22.80:199,23,0
chr10	97772434	.	CTGTTTTGTTT	C	1107.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.922;DP=575;FS=1.038;HRun=0;HaplotypeScore=157.7929;InbreedingCoeff=0.9736;MQ=60.66;MQ0=4;MQRankSum=-6.065;QD=48.17;ReadPosRankSum=1.032;VQSLOD=3.6456;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:69.68:0,70,3030	0/0:12,0:12:30.10:0,30,1347	0/0:27,0:14:18.10:0,18,715	0/0:28,0:17:26.94:0,27,667	0/0:23,0:23:48.16:0,48,2105	0/0:16,0:16:45.15:0,45,2034	0/0:13,0:13:30.10:0,30,1245	0/0:27,0:27:45.15:0,45,1874	0/0:23,0:23:42.14:0,42,2092	0/0:27,0:27:60.20:0,60,2493	0/0:22,0:22:57.20:0,57,2754	0/0:18,0:18:48.14:0,48,2003	0/0:14,0:14:33.10:0,33,1391	0/0:16,0:16:36.12:0,36,1560	0/0:20,0:20:48.16:0,48,2228	1/1:1,22:22:39.13:1203,39,0	0/0:14,0:14:39.13:0,39,1762	0/0:4,0:11:15.04:0,15,162	0/0:22,0:22:42.13:0,42,1772	0/0:31,0:31:75.25:0,75,3325	0/0:12,0:12:30.10:0,30,1435	0/0:15,0:15:36.12:0,36,1536	0/0:24,0:24:60.21:0,60,2828	0/0:14,0:14:37.92:0,38,1680	0/0:29,0:29:75.21:0,75,2985	0/0:26,0:26:60.20:0,60,2900	0/0:18,0:18:42.11:0,42,1512	0/0:17,0:17:48.16:0,48,2129
chr10	97772540	.	TCCCCAA	T	1156.60	PASS	AB=1.000;AC=3;AF=0.056;AN=54;BaseQRankSum=7.310;DP=542;FS=1.779;HRun=0;HaplotypeScore=106.1562;InbreedingCoeff=0.6980;MQ=62.33;MQ0=15;MQRankSum=-6.332;QD=21.42;ReadPosRankSum=-0.806;VQSLOD=2.8976;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,29:31:60.20:1250,60,0	0/0:4,0:4:12.04:0,12,360	0/0:21,0:10:12.63:0,13,639	0/1:22,0:14:3.16:3,0,1111	0/0:24,0:24:69.24:0,69,2350	0/0:21,0:20:57.20:0,57,2001	0/0:16,0:16:45.15:0,45,1530	0/0:34,0:25:69.24:0,69,2332	0/0:15,0:15:45.15:0,45,1479	0/0:25,0:24:72.25:0,72,2441	0/0:20,0:19:51.18:0,51,1793	0/0:17,0:17:51.18:0,51,1730	0/0:15,0:15:45.15:0,45,1585	0/0:19,0:19:54.19:0,54,1907	0/0:22,0:22:66.23:0,66,2275	0/0:10,0:10:27.09:0,27,940	0/0:26,0:26:72.23:0,72,2381	0/0:7,0:7:18.06:0,18,636	0/0:20,0:17:48.15:0,48,1565	0/0:20,0:19:57.20:0,57,1925	0/0:24,0:23:69.24:0,69,2429	0/0:21,0:21:63.22:0,63,2139	0/0:17,0:16:45.15:0,45,1569	0/0:18,0:17:51.18:0,51,1685	0/0:20,0:20:57.20:0,57,1974	0/0:28,0:28:81.27:0,81,2701	0/0:23,0:23:66.23:0,66,2270	./.
chr10	97772668	.	CT	C	1005.60	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.787;DP=653;FS=3.292;HRun=4;HaplotypeScore=63.1669;InbreedingCoeff=0.9842;MQ=56.61;MQ0=20;MQRankSum=2.695;QD=25.14;ReadPosRankSum=2.102;VQSLOD=2.5449;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:72.14:0,72,930	0/0:11,0:11:33.11:0,33,461	0/0:18,0:10:27.05:0,27,351	0/0:26,0:11:33.11:0,33,452	0/0:25,0:24:66.22:0,66,924	0/0:21,0:21:63.21:0,63,882	0/0:19,0:19:54.09:0,54,712	0/0:30,0:24:66.16:0,66,856	0/0:13,0:13:39.13:0,39,546	0/0:25,0:25:72.23:0,72,994	0/0:19,0:19:57.19:0,57,798	0/0:25,0:25:72.23:0,72,991	0/0:22,0:22:60.19:0,60,824	0/0:25,0:25:75.25:0,75,1050	0/0:27,0:27:78.26:0,78,1092	0/0:21,0:20:54.16:0,54,725	0/0:38,0:38:99:0,105,1415	1/1:5,16:20:12.40:438,12,0	0/0:24,0:18:54.17:0,54,727	0/0:29,0:29:78.25:0,78,1074	0/0:29,0:29:84.27:0,84,1159	0/0:28,0:28:75.25:0,75,1049	0/0:21,0:21:63.21:0,63,882	0/0:25,0:25:72.24:0,72,1007	0/0:23,0:23:69.23:0,69,966	1/1:0,19:19:57.17:684,57,0	0/0:22,0:22:66.22:0,66,917	0/0:11,0:11:33.11:0,33,462
chr10	97773054	.	AGGT	A	2027.39	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.864;DP=684;FS=0.000;HRun=0;HaplotypeScore=88.8380;InbreedingCoeff=0.9949;MQ=56.16;MQ0=12;MQRankSum=-1.271;QD=40.55;ReadPosRankSum=1.260;VQSLOD=4.6687;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:99:0,105,2366	0/0:14,0:14:39.06:0,39,801	0/0:30,0:12:33.58:0,34,748	0/0:16,0:11:33.11:0,33,747	0/0:35,0:35:99:0,99,2243	0/0:22,0:22:66.21:0,66,1472	0/0:13,0:12:33.11:0,33,761	0/0:25,0:25:75.26:0,75,1730	0/0:15,0:15:45.15:0,45,1038	0/0:35,0:35:99:0,102,2353	0/0:24,0:24:69.24:0,69,1581	0/0:19,0:19:57.20:0,57,1312	0/0:28,0:28:84.29:0,84,1914	0/0:16,0:16:48.16:0,48,1102	0/0:13,0:13:39.13:0,39,899	0/0:28,0:28:84.29:0,84,1896	0/0:30,0:30:81.28:0,81,1844	1/1:1,25:26:17.69:1073,18,0	0/0:32,0:26:78.26:0,78,1713	0/0:32,0:32:96.32:0,96,2160	0/0:13,0:13:33.09:0,33,710	0/0:25,0:25:69.24:0,69,1586	0/0:26,0:26:75.26:0,75,1725	0/0:20,0:20:54.15:0,54,1153	0/0:32,0:32:87.30:0,87,2006	1/1:2,22:24:63.22:1074,63,0	0/0:37,0:36:99:0,111,2451	0/0:17,0:16:45.15:0,45,1037
chr10	97773955	.	A	AT	1578.95	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.167;DP=671;FS=3.539;HRun=6;HaplotypeScore=69.0593;InbreedingCoeff=0.9961;MQ=63.79;MQ0=0;MQRankSum=-2.498;QD=27.70;ReadPosRankSum=2.516;VQSLOD=4.4834;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,33:39:91.53:1134,92,0	0/0:8,0:9:24.05:0,24,245	0/0:10,0:10:20.48:0,20,166	0/0:16,0:16:38.07:0,38,353	0/0:29,0:31:79.24:0,79,776	0/0:25,0:25:69.11:0,69,693	0/0:25,0:25:66.14:0,66,672	0/0:29,0:29:75.17:0,75,765	0/0:20,0:20:60.12:0,60,606	0/0:39,0:39:99:0,102,1040	0/0:24,0:24:72.16:0,72,734	0/0:14,0:14:39.07:0,39,390	0/0:28,0:28:84.17:0,84,848	0/0:21,0:21:60.13:0,60,611	0/0:29,0:29:75.15:0,75,758	1/1:0,18:18:45.14:566,45,0	0/0:35,0:36:99:0,102,1040	0/0:36,0:36:99:0,102,1033	0/0:20,0:20:60.12:0,60,601	0/0:31,0:31:93.19:0,93,941	0/0:20,0:20:57.13:0,57,582	0/0:20,0:20:54.12:0,54,550	0/0:34,0:34:99:0,102,1034	0/0:22,0:22:51.09:0,51,512	0/0:14,0:14:30.06:0,30,306	0/0:24,0:24:60.11:0,60,601	0/0:24,0:24:69.15:0,69,703	0/0:12,0:12:36.08:0,36,367
chr10	97774364	.	TCTAGGTTC	T	2470.94	PASS	AB=0.535;AC=3;AF=0.054;AN=56;BaseQRankSum=9.067;DP=629;FS=5.321;HRun=0;HaplotypeScore=156.4190;InbreedingCoeff=0.6450;MQ=69.00;MQ0=0;MQRankSum=-9.232;QD=53.72;ReadPosRankSum=2.877;VQSLOD=3.2389;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:50.69:1177,51,0	0/0:10,0:10:30.10:0,30,1268	0/0:25,0:25:75.23:0,75,3065	0/0:19,0:19:38.89:0,39,2069	0/0:24,0:24:72.25:0,72,3093	0/0:9,0:9:21.07:0,21,897	0/0:24,0:24:72.23:0,72,2966	0/0:27,0:27:72.23:0,72,2683	0/0:25,0:25:72.25:0,72,3045	0/0:22,0:22:63.22:0,63,2742	0/0:13,0:13:33.11:0,33,1376	0/0:27,0:27:72.23:0,72,3025	0/0:22,0:22:57.20:0,57,2211	0/0:23,0:23:63.20:0,63,2456	0/0:27,0:27:81.28:0,81,3524	0/1:3,20:21:79.99:1400,0,80	0/0:29,0:28:75.26:0,75,3224	0/0:21,0:21:63.22:0,63,2725	0/0:18,0:18:54.19:0,54,2207	0/0:28,0:28:81.28:0,81,3407	0/0:61,0:61:99:0,181,7465	0/0:23,0:23:63.22:0,63,2765	0/0:19,0:19:51.18:0,51,2227	0/0:23,0:23:66.21:0,66,2728	0/0:12,0:12:36.12:0,36,1605	0/0:23,0:23:69.24:0,69,3022	0/0:20,0:20:60.21:0,60,2543	0/0:9,0:9:27.09:0,27,1207
chr10	97779185	.	C	CA	517.34	PASS	AB=0.938;AC=6;AF=0.107;AN=56;BaseQRankSum=-2.479;DP=445;FS=8.921;HRun=11;HaplotypeScore=48.0999;InbreedingCoeff=0.6204;MQ=56.72;MQ0=20;MQRankSum=2.004;QD=7.84;ReadPosRankSum=0.442;VQSLOD=1.0420;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,21:29:16.49:516,16,0	0/0:5,0:5:8.96:0,9,70	0/0:8,0:4:2.87:0,3,23	0/1:5,0:2:0.51:1,0,1	0/0:11,0:13:27.98:0,28,197	0/0:17,1:19:12.46:0,12,258	0/0:13,0:12:20.90:0,21,163	0/0:27,0:24:53.74:0,54,415	0/0:10,0:9:23.88:0,24,183	0/0:18,0:18:44.82:0,45,347	0/0:19,0:19:38.83:0,39,302	0/0:15,0:12:20.86:0,21,160	0/0:16,0:16:26.85:0,27,208	0/0:5,0:5:11.95:0,12,93	0/0:10,0:10:23.89:0,24,182	0/0:10,0:10:17.80:0,18,128	0/0:29,0:29:59.72:0,60,464	0/0:20,1:20:14.37:0,14,292	0/0:25,0:26:57.84:0,58,428	0/0:18,1:19:17.37:0,17,318	0/0:19,0:17:32.84:0,33,255	0/1:12,2:13:31.01:31,0,155	0/0:9,0:9:14.93:0,15,116	0/0:8,0:7:19.90:0,20,137	0/0:22,1:24:7.96:0,8,306	1/1:8,1:14:17.19:95,17,0	0/0:23,0:21:44.76:0,45,348	0/0:8,0:7:17.90:0,18,136
chr10	97779380	.	CTG	C	1434.82	PASS	AB=0.797;AC=35;AF=0.729;AN=48;BaseQRankSum=1.816;DP=493;FS=4.523;HRun=0;HaplotypeScore=67.8295;InbreedingCoeff=0.2485;MQ=73.03;MQ0=16;MQRankSum=0.894;QD=4.57;ReadPosRankSum=2.414;VQSLOD=1.7417;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:31:28.96:0,29,223	./.	./.	./.	1/1:17,4:22:8.05:70,8,0	1/1:18,0:19:5.84:46,6,0	1/1:11,1:12:3.01:32,3,0	0/0:31,0:30:3.01:0,3,38	0/1:19,2:21:6.27:78,0,6	1/1:16,4:20:11.06:102,11,0	0/1:9,1:11:38.90:56,0,39	1/1:6,0:6:5:26,5,0	1/1:7,1:8:3:32,3,0	1/1:4,4:8:9.02:93,9,0	0/0:14,0:14:2.98:0,3,22	1/1:9,0:15:16.95:81,17,0	1/1:21,6:28:28.77:370,29,0	1/1:13,3:17:13.90:117,14,0	./.	0/1:14,2:17:34.26:37,0,34	1/1:18,0:17:5.75:31,6,0	1/1:9,7:15:12.03:125,12,0	1/1:19,0:19:8.01:55,8,0	1/1:14,1:17:14.16:91,14,0	0/1:11,4:15:10.92:85,0,11	0/0:19,0:18:18.08:0,18,124	1/1:9,0:9:1.24:3,1,0	0/1:5,3:8:52.36:52,0,76
chr10	97780628	.	T	TACACACAC	867.59	PASS	AB=0.902;AC=9;AF=0.180;AN=50;BaseQRankSum=-0.087;DP=438;FS=4.501;HRun=0;HaplotypeScore=114.7026;InbreedingCoeff=0.3867;MQ=66.42;MQ0=6;MQRankSum=-5.279;QD=7.35;ReadPosRankSum=-4.050;VQSLOD=0.7020;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:29:36.06:36,0,166	0/0:4,0:6:3.01:0,3,44	./.	./.	0/0:13,0:15:12.37:0,12,171	0/0:25,0:27:30.08:0,30,631	0/0:12,0:12:5.86:0,6,145	1/1:25,0:25:15.04:243,15,0	0/0:9,0:10:12.04:0,12,277	0/0:14,0:14:8.86:0,9,161	0/0:12,0:15:17.52:0,18,290	./.	0/0:11,0:12:9.02:0,9,204	0/0:6,0:8:6.02:0,6,130	0/0:11,0:12:9.03:0,9,203	1/1:8,6:15:12.04:455,12,0	0/0:16,0:19:36.09:0,36,704	0/0:14,0:16:3.90:0,4,28	0/0:13,0:13:3.01:0,3,74	0/1:14,0:24:8.46:39,0,8	0/0:9,0:21:6.39:0,6,102	0/0:8,0:9:12.92:0,13,252	0/0:9,0:11:9.01:0,9,155	0/0:8,0:10:11.93:0,12,238	0/0:14,0:15:6.02:0,6,128	0/1:11,0:19:3.28:3,0,212	0/0:14,0:21:7.05:0,7,34	1/1:5,0:5:9.92:230,10,0
chr10	97781365	.	ATGTTT	A	996.39	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.660;DP=664;FS=4.538;HRun=0;HaplotypeScore=116.4407;InbreedingCoeff=0.9997;MQ=84.67;MQ0=0;MQRankSum=-3.083;QD=35.59;ReadPosRankSum=0.473;VQSLOD=3.3802;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:54.19:1091,54,0	0/0:18,0:18:51.15:0,51,1462	0/0:28,0:28:70.06:0,70,1966	0/0:23,0:23:56.77:0,57,1396	0/0:33,0:33:93.30:0,93,2681	0/0:29,0:29:84.29:0,84,2547	0/0:23,0:23:66.21:0,66,1929	0/0:33,0:33:84.28:0,84,2480	0/0:26,0:26:78.24:0,78,2234	0/0:21,0:21:60.21:0,60,1770	0/0:29,0:29:81.26:0,81,2353	0/0:12,0:12:33.10:0,33,937	0/0:25,0:25:75.26:0,75,2265	0/0:25,0:25:75.26:0,75,2270	0/0:15,0:15:42.14:0,42,1273	0/0:23,0:23:63.22:0,63,1910	0/0:26,0:26:66.11:0,66,1683	0/0:18,0:18:48.16:0,48,1453	0/0:18,0:18:51.16:0,51,1417	0/0:36,0:36:99:0,102,3074	0/0:22,0:22:60.19:0,60,1752	0/0:17,0:17:51.17:0,51,1445	0/0:24,0:24:66.23:0,66,2001	0/0:20,0:20:57.20:0,57,1713	0/0:22,0:22:66.23:0,66,1985	0/0:28,0:28:69.24:0,69,2020	0/0:28,0:28:81.28:0,81,2416	0/0:14,0:14:42.13:0,42,1206
chr10	97782209	.	G	GT	273.58	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-4.643;DP=513;FS=9.101;HRun=7;HaplotypeScore=46.2331;InbreedingCoeff=0.6448;MQ=70.31;MQ0=0;MQRankSum=-0.551;QD=12.44;ReadPosRankSum=0.299;VQSLOD=1.4262;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.10:0,63,608	0/0:9,0:9:27.04:0,27,260	0/0:8,0:8:17.24:0,17,152	0/1:6,0:6:15.61:16,0,72	0/0:23,0:23:66.11:0,66,637	0/0:20,0:20:57.08:0,57,544	0/0:14,0:14:33.05:0,33,319	0/0:27,0:27:69.09:0,69,662	0/0:16,0:16:45.06:0,45,429	0/0:19,0:19:51.08:0,51,492	0/0:23,0:23:69.10:0,69,661	0/0:12,0:12:33.05:0,33,318	0/0:15,0:15:42.06:0,42,406	0/0:15,0:15:42.06:0,42,406	0/0:20,0:20:57.09:0,57,550	1/1:4,12:16:30.09:362,30,0	0/0:28,0:28:81.13:0,81,781	0/0:18,0:18:45.07:0,45,434	0/0:17,0:17:48.07:0,48,463	0/0:25,0:25:72.11:0,72,695	0/0:8,0:8:21.03:0,21,203	0/0:15,0:15:42.03:0,42,389	0/0:16,0:16:45.07:0,45,434	0/0:8,0:7:21.02:0,21,197	0/0:23,0:23:57.04:0,57,536	0/0:26,0:26:72.11:0,72,695	0/0:35,0:35:96.14:0,96,926	0/0:29,0:29:81.10:0,81,774
chr10	97782458	.	C	CT	901.13	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.542;DP=536;FS=0.691;HRun=7;HaplotypeScore=56.1852;InbreedingCoeff=0.9273;MQ=71.28;MQ0=0;MQRankSum=-2.570;QD=25.03;ReadPosRankSum=-0.209;VQSLOD=3.7490;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:20:51:551,51,0	0/0:11,0:11:27.04:0,27,261	0/0:7,0:8:9.60:0,10,114	0/0:8,0:8:11.33:0,11,72	0/0:21,0:21:54.06:0,54,515	0/0:23,0:23:60.09:0,60,579	0/0:13,0:13:36.06:0,36,348	0/0:32,0:32:63.07:0,63,608	0/0:16,0:16:42.06:0,42,406	0/0:27,0:27:72.10:0,72,691	0/0:22,0:22:63.10:0,63,608	0/0:18,0:18:48.06:0,48,459	0/0:21,0:21:60.10:0,60,579	0/0:21,0:21:60.08:0,60,573	0/0:30,0:30:78.10:0,78,742	1/1:0,16:16:39.12:471,39,0	0/0:15,0:15:36.02:0,36,340	0/0:3,0:3:9.01:0,9,87	0/0:24,0:23:57.09:0,57,550	0/0:36,0:36:99:0,102,980	0/0:11,0:11:27.04:0,27,260	0/0:12,0:12:33.04:0,33,313	0/0:22,0:22:63.10:0,63,608	0/0:8,0:8:24.04:0,24,232	0/0:22,0:22:63.08:0,63,601	0/0:25,0:25:65.60:0,66,624	0/0:35,0:34:99:0,102,985	0/0:16,0:16:39.06:0,39,377
chr10	97782515	.	T	TTCCCTCCTTCATC	9444.47	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-3.844;DP=559;FS=4.815;HRun=0;HaplotypeScore=191.9964;InbreedingCoeff=0.9686;MQ=79.87;MQ0=0;MQRankSum=-9.691;QD=134.92;ReadPosRankSum=-0.289;VQSLOD=4.8316;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,11:19:39.13:2561,39,0	0/0:10,0:10:24.07:0,24,792	0/0:14,0:14:32.18:0,32,729	0/0:18,0:18:30.54:0,31,1042	0/0:36,0:36:99:0,105,3770	0/0:20,0:20:51.17:0,51,1995	0/0:14,0:14:36.11:0,36,1198	0/0:38,0:38:99:0,102,3373	0/0:22,0:22:66.20:0,66,2186	0/0:30,0:29:87.30:0,87,3264	0/0:13,0:13:39.13:0,39,1494	0/0:21,0:21:63.22:0,63,2284	0/0:23,0:23:66.19:0,66,2247	0/0:14,0:14:39.13:0,39,1414	0/0:26,0:26:69.24:0,69,2629	1/1:10,4:14:42.13:1798,42,0	0/0:13,0:13:36.08:0,36,1243	1/1:5,0:5:6.02:240,6,0	0/0:22,0:22:57.19:0,57,1947	0/0:32,0:32:93.30:0,93,3260	0/0:15,0:15:45.15:0,45,1594	0/0:20,0:20:57.17:0,57,1904	0/0:21,0:21:60.20:0,60,2045	0/0:8,0:8:24.08:0,24,884	0/0:28,0:28:78.22:0,78,2693	1/1:7,15:32:90.28:4845,90,0	0/0:21,0:21:60.19:0,60,2082	0/0:10,0:10:30.07:0,30,1006
chr10	97783702	.	CT	C	2103.36	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.032;DP=787;FS=0.000;HRun=3;HaplotypeScore=77.2617;InbreedingCoeff=0.9989;MQ=63.62;MQ0=0;MQRankSum=0.907;QD=32.36;ReadPosRankSum=2.374;VQSLOD=3.9474;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,1986	0/0:16,0:16:48.12:0,48,667	0/0:27,0:26:69.17:0,69,927	0/0:28,0:26:65.30:0,65,872	0/0:33,0:33:99:0,99,1371	0/0:28,0:28:78.25:0,78,1107	0/0:28,0:28:78.22:0,78,1070	0/0:32,0:32:93.26:0,93,1298	0/0:36,0:36:99:0,108,1535	0/0:31,0:31:93.31:0,93,1336	0/0:29,0:29:81.26:0,81,1129	0/0:36,0:36:99:0,105,1494	0/0:23,0:23:66.21:0,66,928	0/0:20,0:20:57.19:0,57,821	0/0:26,0:26:78.25:0,78,1105	0/0:18,0:18:51.17:0,51,734	0/0:29,0:29:78.25:0,78,1096	1/1:1,26:27:75.24:930,75,0	0/0:25,0:25:72.24:0,72,1036	0/0:32,0:32:93.31:0,93,1331	0/0:36,0:36:99:0,102,1429	0/0:36,0:36:99:0,102,1446	0/0:27,0:27:78.25:0,78,1107	0/0:18,0:18:48.14:0,48,666	0/0:27,0:26:78.26:0,78,1106	1/1:2,36:38:68.13:1295,68,0	0/0:25,0:25:75.24:0,75,1061	0/0:8,0:8:24.08:0,24,346
chr10	97783988	.	AT	A	2086.23	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.876;DP=902;FS=0.505;HRun=2;HaplotypeScore=80.8791;InbreedingCoeff=0.9703;MQ=60.31;MQ0=7;MQRankSum=0.010;QD=35.36;ReadPosRankSum=3.170;VQSLOD=4.1646;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,59:59:99:2181,169,0	0/0:17,0:17:51.17:0,51,764	0/0:17,0:15:45.15:0,45,661	0/0:27,0:17:45.14:0,45,655	0/0:33,0:33:93.30:0,93,1373	0/0:24,0:24:66.22:0,66,971	0/0:38,0:38:99:0,114,1667	0/0:42,0:40:99:0,120,1764	0/0:41,0:41:99:0,123,1803	0/0:31,0:30:90.29:0,90,1316	0/0:17,0:17:51.16:0,51,741	0/0:42,0:42:99:0,126,1846	0/0:33,0:33:96.33:0,96,1436	0/0:27,0:27:81.26:0,81,1194	0/0:33,0:33:99:0,99,1461	0/0:23,0:23:69.23:0,69,1016	0/0:49,0:49:99:0,147,2161	0/0:33,0:33:99:0,99,1448	0/0:20,0:18:54.18:0,54,799	0/0:27,0:27:72.22:0,72,1041	0/0:80,0:80:99:0,241,3596	0/0:28,0:28:81.24:0,81,1188	0/0:16,0:16:48.16:0,48,718	0/0:37,0:37:99:0,108,1573	0/0:38,0:38:99:0,114,1686	0/0:28,0:27:78.26:0,78,1169	0/0:38,0:38:99:0,108,1598	0/0:4,0:4:12.04:0,12,180
chr10	97786206	.	AAAT	A	506	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=5.575;DP=597;FS=0.881;HRun=0;HaplotypeScore=84.0075;InbreedingCoeff=0.6816;MQ=63.93;MQ0=2;MQRankSum=-3.682;QD=12.34;ReadPosRankSum=-2.234;VQSLOD=2.9872;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,2302	0/0:10,0:10:30.09:0,30,547	0/1:20,0:18:4.01:4,0,541	0/0:10,0:7:12.51:0,13,249	0/0:31,0:31:93.29:0,93,1825	0/0:25,0:25:75.26:0,75,1551	0/0:20,0:20:57.15:0,57,1101	0/0:31,0:31:87.21:0,87,1594	0/0:11,0:11:30.09:0,30,588	0/0:25,0:25:75.24:0,75,1477	0/0:21,0:21:60.21:0,60,1189	0/0:16,0:16:45.08:0,45,872	0/0:18,0:18:54.15:0,54,1017	0/0:23,0:23:63.14:0,63,1178	0/0:11,0:11:33.10:0,33,645	0/0:23,0:23:66.19:0,66,1290	0/0:31,0:31:90.22:0,90,1687	1/1:1,19:20:41.93:600,42,0	0/0:20,0:20:59.55:0,60,1117	0/0:28,0:28:81.23:0,81,1523	0/0:10,0:10:30.10:0,30,610	0/0:23,0:23:66.14:0,66,1235	0/0:15,0:15:42.12:0,42,829	0/0:19,0:19:57.20:0,57,1155	0/0:19,0:19:57.16:0,57,1082	0/0:29,0:29:31.15:0,31,453	0/0:29,0:28:84.28:0,84,1722	0/0:16,0:16:9.92:0,10,790
chr10	97786208	.	AT	A	503.64	PASS	AB=0.955;AC=5;AF=0.089;AN=56;BaseQRankSum=6.361;DP=600;FS=5.851;HRun=1;HaplotypeScore=59.6344;InbreedingCoeff=0.8225;MQ=63.91;MQ0=2;MQRankSum=-1.993;QD=7.09;ReadPosRankSum=-3.127;VQSLOD=-0.4417;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,1476	0/0:10,0:10:30.05:0,30,345	0/1:20,1:18:3.87:4,0,326	0/0:9,1:7:12.01:0,12,155	0/0:31,0:31:93.26:0,93,1158	0/0:26,0:26:78.24:0,78,994	0/0:20,0:20:60.15:0,60,732	0/0:30,0:30:87.19:0,87,1044	0/0:10,0:10:30.08:0,30,373	0/0:25,0:25:75.23:0,75,949	0/0:22,0:22:63.10:0,63,750	0/0:15,0:15:45.08:0,45,560	0/0:19,0:19:57.13:0,57,680	0/0:21,0:21:63.15:0,63,769	0/0:11,0:11:33.09:0,33,413	0/0:22,0:22:66.18:0,66,825	0/0:30,0:30:90.14:0,90,1075	1/1:20,0:18:40.14:263,40,0	0/0:21,0:21:62.55:0,63,761	0/0:28,0:28:81.15:0,81,983	0/0:10,0:10:30.10:0,30,387	0/0:23,0:23:69.13:0,69,823	0/0:15,0:15:42.10:0,42,528	0/0:21,0:21:63.15:0,63,765	0/0:21,0:21:63.14:0,63,744	1/1:26,4:30:28.68:360,29,0	0/0:28,0:27:84.26:0,84,1071	0/0:16,0:16:27.39:0,27,523
chr10	97787301	.	AC	A	2294.09	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.017;DP=688;FS=2.812;HRun=3;HaplotypeScore=65.6786;InbreedingCoeff=0.9093;MQ=88.56;MQ0=0;MQRankSum=-2.095;QD=30.19;ReadPosRankSum=2.850;VQSLOD=3.5412;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:81.25:1004,81,0	0/0:11,0:11:33.11:0,33,475	0/0:20,0:20:54.18:0,54,771	0/0:30,0:29:87.23:0,87,1178	0/0:32,0:32:96.31:0,96,1361	0/0:26,0:25:72.24:0,72,1036	0/0:19,0:19:51.17:0,51,734	0/0:32,0:32:93.31:0,93,1339	0/0:27,0:27:78.25:0,78,1105	0/0:41,0:41:99:0,117,1647	0/0:15,0:15:45.15:0,45,648	0/0:25,0:25:75.25:0,75,1080	0/0:28,0:28:78.24:0,78,1102	0/0:19,0:19:57.18:0,57,803	0/0:30,0:30:90.29:0,90,1277	0/0:23,0:23:66.22:0,66,950	0/0:18,0:18:51.17:0,51,734	1/1:1,15:16:42.10:503,42,0	0/0:14,0:14:42.13:0,42,587	0/0:32,0:32:96.32:0,96,1379	0/0:25,0:25:72.24:0,72,1036	0/0:32,0:32:93.31:0,93,1335	0/0:25,0:25:72.24:0,72,1033	0/0:25,0:25:75.25:0,75,1080	0/0:21,0:21:63.20:0,63,889	1/1:3,27:30:0.84:918,1,0	0/0:31,0:31:93.31:0,93,1339	0/0:11,0:11:33.10:0,33,456
chr10	97787574	.	A	AG	2704.16	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.027;DP=628;FS=0.383;HRun=1;HaplotypeScore=91.8916;InbreedingCoeff=0.9986;MQ=82.99;MQ0=1;MQRankSum=-6.166;QD=22.92;ReadPosRankSum=-3.192;VQSLOD=2.7589;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:23:35.50:534,36,0	0/0:10,0:10:30.10:0,30,389	0/0:29,0:29:46.55:0,47,766	0/0:28,0:28:36.28:0,36,667	0/0:36,0:36:99:0,105,1349	0/0:15,0:15:42.11:0,42,516	0/0:22,0:22:66.18:0,66,825	1/1:16,17:32:92.50:785,93,0	0/0:20,0:20:60.19:0,60,767	0/0:20,0:20:60.19:0,60,767	0/0:30,0:30:87.24:0,87,1088	0/0:11,0:11:30.10:0,30,389	0/0:21,0:21:63.20:0,63,815	0/0:22,0:22:63.20:0,63,818	0/0:19,0:19:57.19:0,57,739	1/1:1,13:14:42.08:438,42,0	0/0:20,0:20:54.31:0,54,734	1/1:1,10:11:21.72:187,22,0	0/0:17,0:17:51.15:0,51,639	0/0:36,0:36:99:0,102,1312	0/0:24,0:24:69.22:0,69,896	0/0:31,0:31:93.29:0,93,1184	0/0:23,0:23:63.20:0,63,817	0/0:16,0:16:48.16:0,48,622	0/0:19,0:19:57.19:0,57,739	1/1:4,18:22:24.03:579,24,0	0/0:40,0:40:99:0,120,1542	1/1:4,11:15:42.06:369,42,0
chr10	97787576	.	T	TG	2523.68	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.647;DP=623;FS=0.825;HRun=1;HaplotypeScore=93.8862;InbreedingCoeff=0.9942;MQ=85.77;MQ0=1;MQRankSum=-9.968;QD=22.94;ReadPosRankSum=-1.838;VQSLOD=3.1764;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:22:39.82:551,40,0	0/0:11,0:11:30.10:0,30,420	0/0:33,0:32:74.73:0,75,1005	0/0:32,0:32:51.71:0,52,799	0/0:34,0:34:99:0,102,1426	0/0:12,0:12:36.12:0,36,502	0/0:21,0:21:60.20:0,60,839	1/1:11,17:27:49.56:583,50,0	0/0:20,0:20:60.19:0,60,823	0/0:21,0:21:60.19:0,60,825	0/0:30,0:30:90.26:0,90,1197	0/0:11,0:11:30.10:0,30,420	0/0:21,0:21:63.21:0,63,880	0/0:21,0:21:63.21:0,63,881	0/0:19,0:19:57.19:0,57,797	1/1:0,13:13:39.07:409,39,0	0/0:21,0:21:51:0,51,765	1/1:1,10:11:27:286,27,0	0/0:18,0:18:51.16:0,51,695	0/0:36,0:36:99:0,108,1475	0/0:24,0:24:69.23:0,69,965	0/0:32,0:32:96.29:0,96,1297	0/0:21,0:21:63.21:0,63,880	0/0:16,0:16:48.16:0,48,661	0/0:19,0:19:57.19:0,57,797	1/1:3,18:21:12.82:523,13,0	0/0:40,0:40:99:0,120,1677	1/1:4,11:15:39.75:358,40,0
chr10	97788547	.	CCTAATCCTT	C	785.97	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.476;DP=580;FS=6.382;HRun=0;HaplotypeScore=151.8973;InbreedingCoeff=0.9792;MQ=62.83;MQ0=1;MQRankSum=-4.693;QD=25.35;ReadPosRankSum=0.089;VQSLOD=2.8640;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,22:31:30.57:880,31,0	0/0:7,0:7:21.07:0,21,914	0/0:19,0:18:42.14:0,42,1584	0/0:35,0:33:79.22:0,79,3623	0/0:38,0:38:99:0,105,4718	0/0:18,0:18:54.19:0,54,2458	0/0:19,0:19:51.17:0,51,2188	0/0:30,0:30:81.27:0,81,3392	0/0:19,0:19:45.15:0,45,1953	0/0:27,0:27:75.25:0,75,3315	0/0:19,0:19:54.19:0,54,2369	0/0:12,0:12:33.11:0,33,1536	0/0:19,0:19:48.16:0,48,2175	0/0:15,0:15:45.15:0,45,2020	0/0:14,0:14:42.14:0,42,1896	0/0:14,0:14:39.13:0,39,1846	0/0:25,0:25:63.20:0,63,2735	0/0:12,0:12:30.10:0,30,1380	0/0:30,0:30:72.21:0,72,3033	0/0:13,0:13:39.12:0,39,1602	0/0:24,0:24:66.23:0,66,2996	0/0:20,0:20:60.21:0,60,2787	0/0:20,0:20:57.20:0,57,2548	0/0:18,0:18:48.16:0,48,2144	0/0:27,0:27:69.24:0,69,3003	0/0:24,0:24:69.24:0,69,3181	0/0:26,0:26:75.26:0,75,3325	0/0:5,0:5:15.05:0,15,687
chr10	97790175	.	CT	C	811.53	PASS	AB=0.900;AC=7;AF=0.125;AN=56;BaseQRankSum=6.803;DP=806;FS=15.992;HRun=3;HaplotypeScore=53.0472;InbreedingCoeff=0.8226;MQ=41.45;MQ0=354;MQRankSum=-8.727;QD=9.33;ReadPosRankSum=-2.271;VQSLOD=-0.4771;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:23,3:7:18.32:110,0,18	0/0:12,0:8:24.08:0,24,316	0/0:17,0:10:28.79:0,29,306	0/0:11,0:10:30.06:0,30,387	0/0:27,0:20:50.95:0,51,733	0/0:32,0:16:37.37:0,37,519	0/0:38,1:17:51.17:0,51,697	0/0:35,0:11:26.99:0,27,320	0/0:20,0:14:42.14:0,42,563	0/0:37,0:20:53.90:0,54,680	0/0:15,0:12:33.11:0,33,440	0/0:26,1:10:27.09:0,27,368	0/0:21,0:16:33.48:0,33,475	0/0:34,0:14:39.12:0,39,505	0/0:24,0:19:47.22:0,47,607	1/1:2,9:9:27.08:332,27,0	0/0:39,1:14:35.90:0,36,451	1/1:19,8:8:21.07:258,21,0	0/0:11,0:6:14.04:0,14,158	0/0:37,0:19:45.06:0,45,598	0/0:14,1:6:13.34:0,13,204	0/0:59,0:13:28.29:0,28,371	0/0:42,0:24:63.74:0,64,860	0/0:72,2:33:46.62:0,47,1020	0/0:23,0:20:53.94:0,54,707	1/1:15,7:8:21.07:258,21,0	0/0:36,1:24:64.44:0,64,863	0/0:30,0:16:35.07:0,35,470
chr10	97790185	.	CT	C	1020.65	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.985;DP=584;FS=20.645;HRun=3;HaplotypeScore=55.8211;InbreedingCoeff=0.9911;MQ=64.34;MQ0=102;MQRankSum=-6.838;QD=16.20;ReadPosRankSum=1.981;VQSLOD=2.1821;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,6:7:14.99:185,15,0	0/0:11,0:11:27.09:0,27,387	0/0:27,0:20:58.93:0,59,756	0/0:15,0:14:39.13:0,39,549	0/0:24,0:22:66.22:0,66,946	0/0:16,0:13:33.11:0,33,475	0/0:28,0:21:63.15:0,63,862	0/0:23,0:13:30.02:0,30,406	0/0:17,0:17:48.12:0,48,665	0/0:29,0:25:72.20:0,72,987	0/0:14,0:14:30.10:0,30,411	0/0:15,0:13:33.11:0,33,473	0/0:15,0:14:39.09:0,39,536	0/0:20,1:13:33.10:0,33,455	0/0:17,0:17:45.11:0,45,622	1/1:1,13:13:33.10:406,33,0	0/0:24,0:14:39.09:0,39,534	1/1:12,8:9:24.07:292,24,0	0/0:10,0:7:21.07:0,21,297	0/0:26,0:21:51.17:0,51,731	0/0:9,0:7:21.06:0,21,283	0/0:27,0:13:36.12:0,36,515	0/0:31,0:22:66.19:0,66,911	0/0:52,1:35:84.75:0,85,1193	0/0:20,0:20:48.16:0,48,680	1/1:6,8:8:24.08:295,24,0	0/0:29,0:26:66.22:0,66,947	0/0:20,0:15:36.12:0,36,517
chr10	97791023	.	GTGTGTGTC	G	1237.32	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=8.382;DP=654;FS=0.608;HRun=0;HaplotypeScore=163.2456;InbreedingCoeff=0.2469;MQ=57.58;MQ0=14;MQRankSum=-6.831;QD=10.58;ReadPosRankSum=2.695;VQSLOD=2.7748;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:99:279,0,217	0/0:8,0:8:17.78:0,18,365	0/0:30,0:13:26.11:0,26,307	0/0:31,0:19:17.83:0,18,496	0/0:18,0:18:51.11:0,51,1474	0/0:14,0:14:36.11:0,36,1281	0/0:25,0:25:60.12:0,60,1696	0/1:21,0:19:51.60:52,0,333	0/0:27,0:27:77.99:0,78,2345	0/0:34,0:34:93.23:0,93,2772	0/0:20,0:20:60.10:0,60,1887	0/0:28,0:28:81.15:0,81,2832	0/0:11,0:11:30.55:0,31,1142	0/0:21,0:21:60.14:0,60,1889	0/0:20,0:20:53.86:0,54,1646	1/1:4,14:18:21.01:506,21,0	0/0:23,0:23:62.83:0,63,1664	0/1:19,0:19:99:142,0,117	0/0:18,0:18:47.50:0,48,1108	0/0:16,0:16:45.08:0,45,1123	0/0:70,0:67:99:0,174,5390	0/0:24,0:24:60.05:0,60,1296	0/0:19,0:19:45.12:0,45,1323	0/0:37,0:37:98.68:0,99,2879	0/0:22,0:21:56.53:0,57,1603	0/1:21,0:21:99:389,0,126	0/0:10,0:10:26.98:0,27,557	0/0:11,0:10:17.99:0,18,153
chr10	97791541	.	ACTGT	A	745.01	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.605;DP=675;FS=11.569;HRun=0;HaplotypeScore=117.7915;InbreedingCoeff=0.9990;MQ=79.15;MQ0=0;MQRankSum=-2.339;QD=46.56;ReadPosRankSum=1.714;VQSLOD=4.1409;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,2960	0/0:12,0:12:36.12:0,36,960	0/0:29,0:28:76.55:0,77,1855	0/0:33,0:33:96.33:0,96,2381	0/0:26,0:26:75.24:0,75,1870	0/0:26,0:26:75.26:0,75,1987	0/0:12,0:12:36.12:0,36,930	0/0:36,0:36:96.33:0,96,2526	0/0:33,0:33:93.32:0,93,2480	0/0:29,0:29:81.25:0,81,2090	0/0:16,0:16:48.16:0,48,1202	0/0:19,0:19:54.19:0,54,1385	0/0:27,0:27:81.28:0,81,2089	0/0:22,0:22:66.21:0,66,1705	0/0:23,0:23:69.24:0,69,1840	0/0:27,0:27:78.27:0,78,1955	0/0:23,0:23:66.23:0,66,1704	1/1:0,16:15:45.15:840,45,0	0/0:29,0:29:84.29:0,84,2129	0/0:20,0:20:51.18:0,51,1329	0/0:23,0:22:66.23:0,66,1717	0/0:26,0:26:78.27:0,78,2043	0/0:11,0:11:33.11:0,33,849	0/0:32,0:32:93.31:0,93,2360	0/0:19,0:19:51.17:0,51,1315	0/0:26,0:26:78.26:0,78,2001	0/0:29,0:29:87.30:0,87,2284	0/0:10,0:10:30.10:0,30,764
chr10	97792176	.	CCT	C	549.13	PASS	AB=0.857;AC=5;AF=0.089;AN=56;BaseQRankSum=5.926;DP=442;FS=4.417;HRun=0;HaplotypeScore=59.2196;InbreedingCoeff=0.7428;MQ=75.18;MQ0=2;MQRankSum=0.478;QD=22.88;ReadPosRankSum=0.969;VQSLOD=3.6012;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.18:0,60,977	0/1:5,1:6:20.55:21,0,229	0/0:32,1:24:10.10:0,10,609	0/0:50,0:32:20.10:0,20,654	0/0:11,0:11:30.10:0,30,487	0/0:10,0:10:24.08:0,24,405	0/0:10,0:10:27.07:0,27,420	0/0:23,0:23:54.18:0,54,896	0/0:16,0:16:45.15:0,45,758	0/0:14,0:14:30.10:0,30,499	0/0:11,0:11:21.07:0,21,345	0/0:11,0:11:30.10:0,30,506	0/0:19,0:19:48.16:0,48,801	0/0:5,0:5:12.04:0,12,196	0/0:9,0:9:21.07:0,21,354	0/0:14,0:15:39.12:0,39,632	0/0:14,0:14:39.13:0,39,646	1/1:0,7:7:18.06:232,18,0	0/0:11,0:11:21.07:0,21,353	0/0:14,0:14:36.12:0,36,605	0/0:40,0:40:99:0,99,1637	0/0:11,0:11:30.10:0,30,494	0/0:10,0:10:27.09:0,27,454	0/0:19,0:19:57.19:0,57,958	0/0:16,0:16:48.15:0,48,781	1/1:0,11:11:33.11:425,33,0	0/0:15,0:15:39.13:0,39,644	0/0:8,0:8:21.07:0,21,354
chr10	97796377	.	TA	T	1033.07	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.558;DP=657;FS=5.812;HRun=2;HaplotypeScore=59.1612;InbreedingCoeff=0.9917;MQ=75.20;MQ0=0;MQRankSum=-0.747;QD=33.32;ReadPosRankSum=0.208;VQSLOD=3.4307;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:87.28:1128,87,0	0/0:10,0:10:30.10:0,30,450	0/0:14,0:14:19.06:0,19,469	0/0:15,0:13:35.93:0,36,424	0/0:33,0:33:99:0,99,1480	0/0:24,0:24:69.22:0,69,1013	0/0:9,0:9:27.09:0,27,405	0/0:24,0:24:72.22:0,72,1024	0/0:20,0:20:60.16:0,60,856	0/0:33,0:33:96.32:0,96,1420	0/0:28,0:28:81.27:0,81,1214	0/0:21,0:21:60.17:0,60,842	0/0:20,0:20:60.20:0,60,898	0/0:22,0:22:60.20:0,60,897	0/0:33,0:33:99:0,99,1408	0/0:14,0:14:42.14:0,42,629	0/0:18,0:18:54.16:0,54,769	0/0:15,0:15:45.14:0,45,654	0/0:24,0:24:72.21:0,72,1021	0/0:38,0:38:99:0,111,1634	0/0:17,0:17:51.07:0,51,715	0/0:28,0:28:78.23:0,78,1111	0/0:42,0:42:99:0,123,1820	0/0:12,0:12:33.11:0,33,494	0/0:23,0:23:69.11:0,69,944	0/0:34,0:34:99:0,102,1438	0/0:32,0:32:96.29:0,96,1396	0/0:23,0:23:69.23:0,69,1034
chr10	97800462	.	A	AC	1971.89	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-0.821;DP=560;FS=7.272;HRun=3;HaplotypeScore=50.3230;InbreedingCoeff=0.9323;MQ=55.94;MQ0=23;MQRankSum=-3.164;QD=32.86;ReadPosRankSum=0.559;VQSLOD=3.5400;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:18:39.04:520,39,0	0/0:8,0:8:24.06:0,24,276	0/0:20,0:5:5.39:0,5,56	0/0:14,0:3:7.57:0,8,76	0/0:25,0:25:75.23:0,75,899	0/0:28,0:28:81.24:0,81,960	0/0:13,0:11:30.09:0,30,360	0/0:28,0:28:69.21:0,69,826	0/0:22,0:22:63.16:0,63,732	0/0:26,0:26:75.23:0,75,898	0/0:28,0:28:78.22:0,78,914	0/0:17,0:17:51.16:0,51,612	0/0:19,0:19:57.17:0,57,683	0/0:13,0:13:36.11:0,36,432	0/0:16,0:16:39.11:0,39,456	0/0:14,0:14:42.13:0,42,504	0/0:19,0:19:57.16:0,57,671	1/1:0,30:30:87.29:1217,87,0	0/0:24,0:20:51.15:0,51,602	0/0:30,0:29:81.25:0,81,972	0/0:16,0:16:45.14:0,45,540	0/0:15,0:15:45.14:0,45,540	0/0:24,0:24:72.21:0,72,852	0/0:14,0:14:26.40:0,26,418	0/0:22,0:22:56.36:0,56,633	1/1:0,10:9:27.09:377,27,0	0/0:24,0:24:72.20:0,72,851	0/0:21,0:21:63.19:0,63,756
chr10	97800855	.	GA	G	591.41	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.114;DP=577;FS=1.560;HRun=9;HaplotypeScore=59.2001;InbreedingCoeff=0.9743;MQ=58.62;MQ0=2;MQRankSum=0.494;QD=22.75;ReadPosRankSum=2.192;VQSLOD=4.6072;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:75.04:686,75,0	0/0:7,0:7:15.04:0,15,173	0/0:24,1:14:27.60:0,28,317	0/0:17,1:12:20.26:0,20,206	0/0:32,0:32:84.25:0,84,969	0/0:19,0:19:43.72:0,44,547	0/0:10,0:10:27.08:0,27,312	0/0:27,0:27:75.21:0,75,857	0/0:17,0:17:48.11:0,48,534	0/0:23,1:24:41.74:0,42,734	0/0:25,0:25:69.18:0,69,779	0/0:15,0:15:42.12:0,42,484	0/0:18,0:18:51.14:0,51,580	0/0:22,0:22:51.14:0,51,579	0/0:15,0:15:42.11:0,42,474	0/0:18,0:18:54.16:0,54,623	0/0:26,0:26:53.63:0,54,588	0/0:14,0:14:30.09:0,30,346	0/0:22,0:21:63.19:0,63,727	0/0:34,0:34:96.25:0,96,1081	0/0:14,0:14:36.11:0,36,416	0/0:20,0:20:57.17:0,57,658	0/0:21,0:21:60.18:0,60,692	0/0:12,0:12:24.07:0,24,277	0/0:27,0:27:75.22:0,75,866	0/0:27,0:27:72.19:0,72,814	0/0:32,0:32:81.23:0,81,926	0/0:9,0:9:27.07:0,27,302
chr10	97801515	.	ATTGATATAGTAAAAATGGCCCTC	A	2470.88	PASS	AB=0.800;AC=3;AF=0.054;AN=56;BaseQRankSum=6.606;DP=529;FS=0.000;HRun=0;HaplotypeScore=301.8446;InbreedingCoeff=0.6366;MQ=60.65;MQ0=0;MQRankSum=-3.337;QD=102.95;ReadPosRankSum=1.258;VQSLOD=2.4785;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.24:0,69,6353	0/0:6,0:6:18.06:0,18,1726	0/0:20,0:17:45.15:0,45,2250	0/0:20,0:20:51.18:0,51,3676	0/0:23,0:23:66.21:0,66,6268	0/0:28,0:28:80.29:0,80,7602	0/0:11,0:11:33.10:0,33,2099	0/0:25,0:25:75.26:0,75,6397	0/0:16,0:16:45.15:0,45,4262	0/0:23,0:24:69.24:0,69,6216	0/0:20,0:20:57.20:0,57,4923	0/0:21,0:20:57.20:0,57,4996	0/0:20,0:20:60.21:0,60,5752	0/0:19,0:19:54.19:0,54,5561	0/0:18,0:18:48.16:0,48,4875	0/0:17,0:17:48.16:0,48,4667	0/0:29,0:29:81.28:0,81,7199	0/1:3,1:4:99:181,0,257	0/0:16,0:15:36.08:0,36,2762	0/0:34,0:34:99:0,99,10381	0/0:14,0:14:36.12:0,36,3564	0/0:17,0:17:48.16:0,48,5026	0/0:20,0:20:60.21:0,60,5515	0/0:5,0:5:15.03:0,15,1299	0/0:22,0:22:66.23:0,66,6435	1/1:5,15:20:45.15:2396,45,0	0/0:18,0:18:51.18:0,51,5028	0/0:17,0:17:51.18:0,51,5275
chr10	97803430	.	G	GT	866.86	PASS	AB=0.858;AC=11;AF=0.196;AN=56;BaseQRankSum=-3.619;DP=587;FS=2.425;HRun=12;HaplotypeScore=70.6174;InbreedingCoeff=0.3610;MQ=77.05;MQ0=2;MQRankSum=0.250;QD=5.04;ReadPosRankSum=-2.118;VQSLOD=1.5621;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:13,14:31:10.96:321,0,11	0/1:9,1:11:3.30:3,0,133	0/0:22,0:21:5.32:0,5,138	0/0:28,0:18:1.95:0,2,38	0/0:32,0:33:79.54:0,80,574	0/0:17,0:17:35.70:0,36,260	0/0:9,0:10:16.90:0,17,115	0/0:11,0:33:49.95:0,50,170	0/0:24,0:25:18.78:0,19,327	0/1:26,3:29:25.12:25,0,288	0/1:13,2:16:19.64:20,0,188	0/0:18,0:18:10.54:0,11,199	0/0:12,0:12:17.83:0,18,129	0/0:15,0:15:26.36:0,26,183	0/0:23,0:23:47.68:0,48,350	1/1:7,10:18:29.88:277,30,0	0/0:18,0:19:46.53:0,47,324	1/1:3,11:14:15.02:146,15,0	0/0:16,1:21:8.54:0,9,182	0/1:33,2:36:19.70:20,0,338	0/0:13,0:14:5.74:0,6,195	0/0:15,0:15:35.77:0,36,263	0/0:18,1:19:15.45:0,15,273	0/0:12,0:13:2.97:0,3,140	0/0:18,0:20:37.38:0,37,257	1/1:7,10:17:23.98:214,24,0	0/0:34,0:33:18.06:0,18,406	0/0:8,0:21:25.37:0,25,86
chr10	97804313	.	GAGAT	G	1060.84	PASS	AB=0.772;AC=22;AF=0.458;AN=48;BaseQRankSum=2.011;DP=640;FS=5.458;HRun=0;HaplotypeScore=113.9494;InbreedingCoeff=0.5665;MQ=74.10;MQ0=12;MQRankSum=0.239;QD=4.03;ReadPosRankSum=0.124;VQSLOD=2.0077;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:16,0:16:15.02:0,15,246	./.	./.	0/0:32,0:32:29.96:0,30,411	0/1:12,6:18:29.82:30,0,215	0/0:12,0:11:3:0,3,25	./.	1/1:16,11:26:16.21:266,16,0	0/1:23,0:30:15.35:70,0,15	1/1:22,0:37:0.78:2,1,0	1/1:17,0:17:6.02:89,6,0	0/0:28,0:28:30.10:0,30,665	1/1:11,8:20:18:226,18,0	1/1:17,8:25:9.03:134,9,0	0/0:16,0:16:8.95:0,9,67	0/0:28,0:28:20.95:0,21,223	0/0:15,0:13:5.96:0,6,45	0/0:15,0:15:3.01:0,3,52	0/0:33,0:33:30.09:0,30,638	1/1:9,2:11:3.01:45,3,0	1/1:23,4:27:1.15:42,1,0	0/0:27,0:27:33.10:0,33,677	1/1:12,1:13:6.02:90,6,0	1/1:17,5:23:12.04:178,12,0	0/0:21,0:21:9:0,9,78	0/0:22,0:22:27.09:0,27,619	1/1:13,0:11:4.02:57,4,0
chr10	97804354	.	A	AGAT	62.60	PASS	AB=0.942;AC=5;AF=0.096;AN=52;BaseQRankSum=5.751;DP=570;FS=0.000;HRun=0;HaplotypeScore=107.9942;InbreedingCoeff=-0.1078;MQ=54.11;MQ0=23;MQRankSum=2.800;QD=0.54;ReadPosRankSum=5.608;VQSLOD=1.1621;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:26:17.85:18,0,295	0/1:10,0:10:25.98:26,0,230	./.	./.	0/1:33,0:33:57.68:58,0,899	0/0:24,0:24:54.17:0,54,801	0/0:16,0:14:21.07:0,21,321	0/0:39,0:29:75.04:0,75,1088	0/0:28,0:27:63.18:0,63,847	0/0:29,0:27:72.22:0,72,1046	0/0:24,0:23:24.08:0,24,367	0/0:12,0:12:36.11:0,36,519	0/0:21,0:21:57.19:0,57,908	0/0:21,0:21:48.11:0,48,611	0/0:24,0:24:54.17:0,54,777	0/0:16,0:16:45.12:0,45,631	0/1:28,0:28:27.34:27,0,770	0/1:10,6:15:49.23:49,0,209	0/0:11,0:10:21.06:0,21,301	0/0:27,0:27:74.76:0,75,1183	0/0:12,0:12:30.07:0,30,418	0/0:21,0:21:51.17:0,51,761	0/0:28,0:28:81.22:0,81,1227	0/0:14,0:14:30.08:0,30,417	0/0:22,0:22:47.96:0,48,667	0/0:23,0:23:60.13:0,60,774	0/0:23,0:23:66.22:0,66,1046	0/0:9,0:6:12.01:0,12,160
chr10	97804361	.	TA	T	191.33	PASS	AB=0.750;AC=1;AF=0.019;AN=52;BaseQRankSum=1.969;DP=583;FS=19.744;HRun=1;HaplotypeScore=87.8925;InbreedingCoeff=-0.0248;MQ=53.69;MQ0=24;MQRankSum=-0.750;QD=7.97;ReadPosRankSum=-0.396;VQSLOD=-0.4981;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:26:19.49:0,19,350	0/0:10,0:10:30.08:0,30,401	./.	./.	0/0:31,0:31:90.27:0,90,1234	0/0:26,0:26:55.98:0,56,816	0/0:15,0:13:27.08:0,27,385	0/0:38,0:28:78.22:0,78,1108	0/0:29,0:28:56.05:0,56,698	0/0:28,0:26:68.88:0,69,974	0/0:27,0:26:30.10:0,30,434	0/0:12,0:12:33.96:0,34,458	0/0:22,0:22:60.19:0,60,904	0/0:21,0:21:44.27:0,44,542	0/0:25,0:25:53.60:0,54,707	0/0:15,1:16:5.22:0,5,552	0/0:25,0:25:75.18:0,75,1008	0/0:19,0:17:24.51:0,25,326	0/0:11,0:10:30.09:0,30,428	0/0:28,0:28:79.48:0,79,1167	0/0:12,0:12:28.91:0,29,401	0/0:22,0:22:55.99:0,56,786	0/0:26,0:26:78.26:0,78,1198	0/0:14,0:14:25.53:0,26,358	0/0:20,0:20:43.79:0,44,556	0/1:16,8:24:99:265,0,591	0/0:24,0:24:69.23:0,69,1053	0/0:10,0:8:23.65:0,24,301
chr10	97805717	.	CTT	C	366.36	PASS	AB=0.818;AC=13;AF=0.232;AN=56;BaseQRankSum=8.896;DP=562;FS=5.142;HRun=16;HaplotypeScore=85.1484;InbreedingCoeff=-0.3650;MQ=60.55;MQ0=5;MQRankSum=-5.703;QD=1.22;ReadPosRankSum=6.038;VQSLOD=-0.6930;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:11,4:34:30.49:30,0,240	0/0:5,0:5:11.99:0,12,125	0/0:17,0:11:10.38:0,10,103	0/0:13,0:7:3.01:0,3,32	0/1:27,4:33:41.04:41,0,401	0/0:13,1:19:1.18:0,1,203	0/1:18,6:30:67.86:68,0,349	0/0:29,1:35:1.49:0,1,308	0/1:13,2:16:13.13:13,0,224	0/1:14,4:21:47.36:47,0,150	0/0:20,1:23:9.95:0,10,287	0/0:12,2:14:4.96:0,5,258	0/0:16,1:17:22.78:0,23,405	0/0:15,0:16:12.36:0,12,189	0/0:11,0:15:13.64:0,14,288	0/0:16,1:19:11.65:0,12,244	0/1:22,7:33:99:109,0,362	0/1:13,2:15:17.17:17,0,271	0/1:15,4:20:45.37:45,0,361	0/1:18,3:22:17.87:18,0,180	0/1:8,5:13:73.32:73,0,140	0/0:11,1:13:3.70:0,4,239	0/1:12,2:17:30.86:31,0,126	0/0:20,1:24:16.16:0,16,379	0/1:10,1:13:2.99:3,0,106	0/0:12,0:16:31.06:0,31,258	0/1:29,3:32:12.23:12,0,471	0/0:6,0:14:3.64:0,4,102
chr10	97806503	.	C	CT	3552.50	PASS	AB=0.571;AC=11;AF=0.196;AN=56;BaseQRankSum=-7.334;DP=560;FS=2.976;HRun=7;HaplotypeScore=54.4551;InbreedingCoeff=0.8844;MQ=73.74;MQ0=0;MQRankSum=-0.862;QD=26.71;ReadPosRankSum=-1.051;VQSLOD=3.9615;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,17:22:51.16:616,51,0	0/0:9,0:9:27.04:0,27,261	0/0:18,0:18:41.79:0,42,443	0/0:10,0:10:17.69:0,18,155	0/0:39,0:39:99:0,114,1095	0/0:25,0:25:69.09:0,69,660	0/0:9,0:9:27.04:0,27,261	1/1:10,17:27:29.30:579,29,0	0/0:14,0:14:42.07:0,42,405	0/0:27,0:27:72.11:0,72,695	0/0:21,0:21:60.10:0,60,579	0/0:18,0:18:45.07:0,45,435	0/0:23,0:22:54.07:0,54,522	0/0:21,0:21:54.08:0,54,521	0/0:18,0:18:48.06:0,48,458	1/1:0,17:17:42.13:507,42,0	0/0:17,0:17:39.06:0,39,376	0/1:4,12:16:18.52:359,0,19	0/0:21,0:21:63.10:0,63,608	0/0:25,0:25:63.06:0,63,596	0/0:7,0:7:18.02:0,18,174	0/0:13,0:13:33.05:0,33,319	0/0:23,0:23:63.10:0,63,608	0/0:22,0:22:57.09:0,57,550	0/0:17,0:17:48.08:0,48,464	1/1:4,32:36:70.32:1130,70,0	0/0:30,0:30:78.11:0,78,753	1/1:3,12:15:30.09:361,30,0
chr10	97806981	.	C	CACAA	3451.41	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-2.304;DP=633;FS=0.000;HRun=0;HaplotypeScore=102.7795;InbreedingCoeff=0.9183;MQ=61.15;MQ0=2;MQRankSum=-0.852;QD=25.19;ReadPosRankSum=-0.054;VQSLOD=3.3602;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,22:35:45.15:1069,45,0	0/0:14,0:14:36.11:0,36,545	0/0:34,0:21:2.90:0,3,40	0/0:35,0:26:21.07:0,21,308	0/0:26,0:26:60.19:0,60,916	0/0:20,0:20:30.07:0,30,424	0/0:17,0:17:23.97:0,24,378	1/1:34,0:34:18.05:265,18,0	0/0:23,0:23:57.19:0,57,895	0/0:34,0:34:63.21:0,63,970	0/0:20,0:20:39.12:0,39,578	0/0:18,0:18:21.07:0,21,331	0/0:19,0:19:30.10:0,30,468	0/0:15,0:15:33.10:0,33,493	0/0:23,0:23:51.16:0,51,774	0/0:10,0:26:35.67:0,36,352	0/0:20,0:20:30.10:0,30,463	0/0:5,0:13:24.03:0,24,223	0/0:28,0:28:26.05:0,26,355	0/0:31,0:31:63.21:0,63,989	0/0:16,0:17:36.10:0,36,525	0/0:19,0:19:33.10:0,33,495	1/1:5,9:14:12.93:287,13,0	1/1:7,14:21:33.11:784,33,0	0/0:18,0:18:30.10:0,30,472	1/1:8,13:22:45.15:1021,45,0	0/0:26,0:26:48.15:0,48,733	1/1:8,0:8:3:26,3,0
chr10	97808489	.	C	CATATT	6195.24	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.882;DP=550;FS=1.577;HRun=0;HaplotypeScore=95.2103;InbreedingCoeff=0.9603;MQ=76.04;MQ0=0;MQRankSum=-4.875;QD=77.44;ReadPosRankSum=1.496;VQSLOD=6.4445;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:17:45.15:1486,45,0	0/0:8,0:8:24.03:0,24,413	0/0:14,0:15:14.75:0,15,875	0/0:11,0:11:33.11:0,33,633	0/0:35,0:35:99:0,105,2284	0/0:30,0:30:87.24:0,87,1908	0/0:7,0:7:21.07:0,21,468	0/0:33,0:33:96.21:0,96,1931	0/0:22,0:22:66.23:0,66,1531	0/0:21,0:21:63.21:0,63,1402	0/0:26,0:26:78.25:0,78,1703	0/0:26,0:26:75.26:0,75,1715	0/0:12,0:12:36.12:0,36,836	0/0:19,0:19:57.13:0,57,1178	0/0:17,0:17:48.15:0,48,1071	1/1:1,14:17:36.12:1138,36,0	0/0:18,0:17:33.04:0,33,1071	1/1:0,15:19:42.14:1396,42,0	0/0:19,0:19:51.18:0,51,1162	0/0:33,0:33:93.22:0,93,2015	0/0:15,0:15:45.12:0,45,942	0/0:23,0:23:69.09:0,69,1399	0/0:16,0:16:48.15:0,48,1050	0/0:14,0:14:39.13:0,39,896	0/0:19,0:19:57.15:0,57,1211	1/1:1,22:27:5.48:2176,5,0	0/0:17,0:17:50.92:0,51,1027	0/0:14,0:14:36.12:0,36,833
chr10	97810519	.	G	GA	886.72	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.963;DP=567;FS=2.950;HRun=9;HaplotypeScore=54.8259;InbreedingCoeff=0.9002;MQ=63.00;MQ0=20;MQRankSum=-0.735;QD=15.56;ReadPosRankSum=1.217;VQSLOD=3.8136;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,30:38:79.46:866,79,0	0/0:9,0:8:24:0,24,208	0/0:16,0:4:9:0,9,77	0/0:13,0:6:5.69:0,6,52	0/0:24,0:23:56.97:0,57,495	0/0:19,0:19:44.98:0,45,391	0/0:14,0:13:26.98:0,27,234	0/0:28,0:28:68.01:0,68,579	0/0:16,0:15:11.32:0,11,308	0/0:18,0:18:50.98:0,51,440	0/0:23,0:23:59.98:0,60,521	0/0:17,0:16:41.99:0,42,364	0/0:20,0:20:50.97:0,51,439	0/0:18,0:18:47.96:0,48,413	0/0:14,0:13:35.97:0,36,309	1/1:5,0:19:28.22:142,28,0	0/0:26,0:26:59.97:0,60,521	0/0:29,0:27:53.94:0,54,469	0/0:20,0:19:47.98:0,48,413	0/0:23,0:22:56.96:0,57,491	0/0:12,0:12:35.99:0,36,312	0/0:23,1:24:29.80:0,30,488	0/0:19,0:19:47.97:0,48,412	0/0:12,0:12:26.99:0,27,234	0/0:23,1:24:35.83:0,36,539	0/0:21,0:21:50.96:0,51,438	0/0:27,0:27:71.02:0,71,605	0/0:21,0:21:62.99:0,63,546
chr10	97814860	.	TTTCCTTCC	T	83.39	PASS	AB=0.889;AC=6;AF=0.120;AN=50;BaseQRankSum=3.404;DP=242;FS=0.000;HRun=0;HaplotypeScore=72.1237;InbreedingCoeff=0.4091;MQ=61.30;MQ0=7;MQRankSum=-3.307;QD=2.53;ReadPosRankSum=1.273;VQSLOD=1.3149;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:2:0:0,0,0	0/0:3,0:3:6.02:0,6,194	./.	0/0:17,0:6:2.04:0,2,6	0/0:6,0:6:12.04:0,12,463	0/1:11,0:9:2.07:2,0,476	0/1:10,4:14:54.34:54,0,586	./.	0/0:8,0:8:15.05:0,15,574	0/0:13,0:13:20.92:0,21,621	0/0:8,0:8:9.03:0,9,316	0/0:9,0:9:24.06:0,24,882	0/0:8,0:8:18.06:0,18,722	0/0:12,0:12:33.10:0,33,1042	0/0:9,0:9:18.05:0,18,500	./.	0/0:10,0:8:9.03:0,9,368	1/1:2,0:4:5.99:76,6,0	0/0:6,0:4:6.02:0,6,246	0/0:6,0:6:12.04:0,12,488	0/0:18,0:18:24.06:0,24,767	0/0:7,0:7:9.03:0,9,339	0/0:7,0:7:12.04:0,12,305	0/0:17,0:15:26.56:0,27,757	0/0:5,0:5:12.04:0,12,442	0/0:1,0:1:0.89:0,1,2	0/0:10,0:9:21.52:0,22,678	1/1:2,0:2:3.01:56,3,0
chr10	97814904	.	CTCTT	C	2010.51	PASS	AB=0.952;AC=24;AF=0.480;AN=50;BaseQRankSum=-3.558;DP=349;FS=16.671;HRun=0;HaplotypeScore=70.2714;InbreedingCoeff=0.2632;MQ=45.13;MQ0=34;MQRankSum=2.627;QD=8.82;ReadPosRankSum=0.887;VQSLOD=1.0750;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:7:2.82:20,3,0	0/1:3,0:3:39.60:40,0,63	./.	./.	0/0:8,0:8:9.03:0,9,173	0/1:11,0:10:38.13:82,0,38	1/1:22,0:15:7.70:142,8,0	./.	1/1:15,0:15:15.04:208,15,0	0/1:11,6:13:34.67:98,0,35	1/1:5,10:15:23.95:261,24,0	1/1:15,0:14:15.05:226,15,0	1/1:12,0:10:9.03:134,9,0	1/1:10,0:10:6.02:90,6,0	0/1:13,0:12:2.10:207,0,2	0/1:5,0:3:27.86:34,0,28	0/1:21,0:16:6.67:7,0,79	0/0:15,0:11:18.02:0,18,215	0/0:12,0:6:6.02:0,6,91	0/0:6,0:6:3.01:0,3,69	0/0:13,0:12:15.05:0,15,309	1/1:17,0:16:36.12:542,36,0	0/1:10,0:9:5.24:28,0,5	0/1:27,0:22:54.58:62,0,55	0/0:17,0:17:30.05:0,30,556	0/0:5,0:4:8.97:0,9,81	0/0:17,0:16:27.09:0,27,446	0/0:4,0:2:3.01:0,3,46
chr10	97816391	.	T	TA	54.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.625;DP=412;FS=0.000;HRun=0;HaplotypeScore=49.2527;InbreedingCoeff=0.8137;MQ=54.97;MQ0=6;MQRankSum=2.165;QD=3.87;ReadPosRankSum=2.300;VQSLOD=2.7384;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:44.60:0,45,256	0/0:7,0:7:21.06:0,21,273	0/0:5,0:2:6.02:0,6,84	0/0:5,0:5:11.83:0,12,137	0/0:22,0:22:60.16:0,60,807	0/0:15,0:15:45.14:0,45,607	0/0:10,0:10:26.90:0,27,373	0/0:23,0:23:46.11:0,46,245	0/0:11,0:11:27.08:0,27,355	0/0:24,0:24:66.05:0,66,921	0/0:21,0:21:63.20:0,63,863	0/0:7,0:7:21.07:0,21,287	0/0:9,0:9:27.07:0,27,357	0/0:10,0:10:27.06:0,27,343	0/0:16,0:16:48.16:0,48,670	0/0:15,0:14:29.75:0,30,218	0/0:18,0:18:45.15:0,45,619	0/0:15,0:15:32.75:0,33,180	0/0:17,0:15:45.14:0,45,611	0/0:26,0:26:75.22:0,75,1000	0/0:8,0:7:20.97:0,21,248	0/0:22,0:21:54.16:0,54,717	0/0:21,0:20:60.16:0,60,797	0/0:13,0:13:28.52:0,29,342	0/0:17,0:17:51.16:0,51,696	1/1:9,5:13:9.94:138,10,0	0/0:13,0:12:36.10:0,36,468	0/0:8,0:8:21.39:0,21,125
chr10	97816392	.	T	TA	376.25	PASS	AB=0.833;AC=5;AF=0.089;AN=56;BaseQRankSum=-0.363;DP=417;FS=2.388;HRun=11;HaplotypeScore=48.9279;InbreedingCoeff=0.6706;MQ=54.98;MQ0=6;MQRankSum=1.309;QD=9.65;ReadPosRankSum=0.469;VQSLOD=2.2126;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:20.83:0,21,158	0/0:7,0:7:17.92:0,18,138	0/0:5,0:2:5.98:0,6,46	0/0:5,0:5:11.94:0,12,92	0/0:22,0:22:38.83:0,39,302	0/0:15,0:15:29.87:0,30,230	0/0:10,0:10:23.74:0,24,186	0/0:23,0:23:33.49:0,33,153	0/0:11,0:11:23.89:0,24,184	0/0:23,0:24:55.63:0,56,422	0/0:20,0:21:58.74:0,59,440	0/0:7,0:7:14.93:0,15,116	0/0:10,0:10:20.89:0,21,161	0/1:8,2:10:15.52:16,0,78	0/0:16,0:16:44.81:0,45,345	1/1:1,14:14:33.07:335,33,0	0/0:19,0:19:38.73:0,39,299	0/0:15,0:15:7.85:0,8,89	0/0:17,1:16:8.38:0,8,248	0/0:26,0:27:58.76:0,59,445	0/0:8,0:7:14.84:0,15,112	0/0:22,0:22:49.81:0,50,374	0/0:20,0:20:49.52:0,50,365	0/0:14,0:14:25.81:0,26,180	0/0:17,0:17:44.77:0,45,343	1/1:14,0:13:15.03:152,15,0	0/0:12,0:11:26.88:0,27,209	0/0:8,0:8:17.66:0,18,78
chr10	97817049	.	TA	T	3475.65	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.127;DP=622;FS=1.268;HRun=5;HaplotypeScore=56.9504;InbreedingCoeff=0.9858;MQ=82.56;MQ0=0;MQRankSum=-1.077;QD=31.60;ReadPosRankSum=-2.261;VQSLOD=3.3482;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:51.15:578,51,0	0/0:4,0:4:9.03:0,9,123	0/0:23,0:23:57.19:0,57,764	0/0:11,0:11:24.07:0,24,300	0/0:31,0:31:93.31:0,93,1272	0/0:21,0:21:57.18:0,57,765	0/0:13,0:13:39.11:0,39,513	1/1:2,29:31:87.23:976,87,0	0/0:21,0:21:60.18:0,60,796	0/0:31,0:31:87.29:0,87,1190	0/0:34,0:34:93.29:0,93,1242	0/0:25,0:25:75.25:0,75,1026	0/0:27,0:27:81.24:0,81,1076	0/0:13,0:13:33.11:0,33,452	0/0:27,0:27:81.27:0,81,1108	0/0:23,0:23:69.22:0,69,927	0/0:16,0:16:45.14:0,45,600	1/1:1,19:20:37.01:580,37,0	0/0:19,0:19:54.17:0,54,724	0/0:35,0:35:96.30:0,96,1294	0/0:21,0:21:60.20:0,60,821	0/0:23,0:23:69.23:0,69,944	0/0:15,0:15:39.13:0,39,534	0/0:21,0:21:63.21:0,63,859	0/0:19,0:18:45.15:0,45,616	1/1:1,32:33:58.21:1035,58,0	0/0:39,0:39:99:0,114,1557	1/1:0,9:9:27.08:306,27,0
chr10	97818809	.	GA	G	2037.89	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=11.592;DP=484;FS=4.723;HRun=10;HaplotypeScore=54.2178;InbreedingCoeff=0.8706;MQ=67.15;MQ0=0;MQRankSum=-0.188;QD=16.05;ReadPosRankSum=1.380;VQSLOD=4.0093;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:38.99:339,39,0	0/0:9,0:9:27.07:0,27,299	0/1:6,0:5:3.02:3,0,25	0/0:3,1:5:3:0,3,29	0/0:37,0:37:90.22:0,90,980	0/0:15,0:16:35.91:0,36,363	0/0:15,0:15:39.11:0,39,431	1/1:17,14:31:39.88:353,40,0	0/0:13,1:14:4:0,4,256	0/0:19,1:20:28.08:0,28,531	0/0:28,1:30:48.94:0,49,725	0/0:14,0:14:39.11:0,39,431	0/0:11,0:11:30.04:0,30,301	0/0:15,1:16:19.06:0,19,431	0/0:14,0:14:42.09:0,42,448	1/1:3,8:11:23.98:208,24,0	0/0:11,0:11:27.07:0,27,299	1/1:3,14:17:47.99:416,48,0	0/0:16,0:16:42.07:0,42,445	0/0:19,0:19:48.13:0,48,531	0/0:11,0:11:30.08:0,30,332	0/0:16,0:16:48.12:0,48,524	0/0:18,0:19:38.92:0,39,404	0/0:15,0:15:42.11:0,42,457	0/0:32,0:33:93.07:0,93,995	1/1:3,17:20:53.98:468,54,0	0/0:15,0:16:38.94:0,39,410	1/1:5,19:24:23.79:436,24,0
chr10	97818848	.	TTA	T	1180.24	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=4.929;DP=485;FS=0.614;HRun=0;HaplotypeScore=65.4662;InbreedingCoeff=0.7827;MQ=65.32;MQ0=0;MQRankSum=-2.120;QD=18.16;ReadPosRankSum=-3.132;VQSLOD=2.5755;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:6.85:0,7,138	0/0:14,0:14:39.12:0,39,654	0/0:10,0:9:26.39:0,26,300	0/0:4,0:4:5.82:0,6,104	0/0:33,0:33:99:0,99,1634	0/0:26,0:26:75.20:0,75,1148	0/0:14,0:14:42.07:0,42,602	0/1:27,0:25:51.90:52,0,131	0/0:17,0:17:51.11:0,51,746	0/0:19,0:19:57.16:0,57,865	0/0:24,0:24:66.10:0,66,1033	0/0:15,0:15:45.12:0,45,675	0/0:11,0:11:30.06:0,30,446	0/0:14,0:14:39.11:0,39,628	0/0:20,0:20:60.17:0,60,971	1/1:1,11:12:30.10:432,30,0	0/0:16,0:16:48.14:0,48,745	1/1:5,7:12:33.01:408,33,0	0/0:24,0:24:25.72:0,26,953	0/0:23,0:23:60.13:0,60,973	0/0:9,0:9:27.09:0,27,446	0/0:18,0:18:54.16:0,54,860	0/0:14,0:14:42.14:0,42,689	0/0:8,0:8:24.08:0,24,396	0/0:29,0:29:87.28:0,87,1403	1/1:5,9:14:33.08:436,33,0	0/0:25,0:25:75.20:0,75,1160	0/0:20,0:20:29.09:0,29,279
chr10	97819238	.	GCACACACACACACACACACACA	G	1514.69	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=3.750;DP=558;FS=7.528;HRun=0;HaplotypeScore=271.5199;InbreedingCoeff=0.4723;MQ=65.32;MQ0=17;MQRankSum=0.908;QD=27.54;ReadPosRankSum=-0.630;VQSLOD=1.3813;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:21.01:0,21,240	0/0:4,0:3:6.02:0,6,241	0/0:40,0:22:17.97:0,18,202	0/0:39,0:28:24.05:0,24,319	0/0:16,0:16:21.07:0,21,312	0/0:19,0:20:24.05:0,24,516	0/0:26,0:23:39.06:0,39,663	1/1:17,18:33:12.88:713,13,0	0/0:18,0:18:29.61:0,30,429	0/0:18,0:19:33.04:0,33,730	0/0:14,0:14:13.28:0,13,168	0/0:17,0:17:33.10:0,33,621	0/0:11,0:10:30.08:0,30,690	0/0:8,0:7:18.06:0,18,306	0/0:16,0:13:27.09:0,27,748	0/0:10,0:10:10.35:0,10,101	0/0:17,0:17:5.07:0,5,517	0/0:20,0:20:42.05:0,42,779	0/0:11,0:11:18.04:0,18,253	0/0:15,0:16:21.03:0,21,412	0/0:43,0:42:60.77:0,61,804	0/0:18,0:16:25.87:0,26,471	0/0:10,0:10:24.05:0,24,373	0/0:23,0:23:42.14:0,42,848	0/0:13,0:14:4.55:0,5,128	0/0:26,0:21:38.91:0,39,598	0/0:19,0:18:38.78:0,39,1000	0/1:20,0:19:13.27:901,0,13
chr10	97819277	.	CACACAA	C	344.14	PASS	AB=1.000;AC=11;AF=0.212;AN=52;BaseQRankSum=5.757;DP=650;FS=9.247;HRun=0;HaplotypeScore=161.7804;InbreedingCoeff=-0.0695;MQ=46.17;MQ0=71;MQRankSum=1.356;QD=1.32;ReadPosRankSum=4.411;VQSLOD=1.7760;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:26:24.88:25,0,34	0/0:8,0:7:9.37:0,9,115	./.	./.	0/0:22,0:21:3.06:0,3,128	0/1:28,0:26:12.04:12,0,226	0/0:48,0:34:51.84:0,52,404	0/0:36,0:26:17.79:0,18,140	0/0:20,0:19:25.11:0,25,295	0/0:24,0:19:9.93:0,10,354	0/0:14,7:19:19.14:0,19,152	0/0:21,0:19:4.72:0,5,279	0/0:16,0:15:3.50:0,4,288	0/1:15,0:13:12.86:13,0,128	0/0:19,0:15:15.63:0,16,230	1/1:15,0:12:17.77:123,18,0	0/0:36,0:30:1.34:0,1,362	0/1:24,0:20:0.55:1,0,80	0/1:13,0:10:31.73:32,0,131	0/0:16,0:14:21.31:0,21,218	0/1:71,0:59:82.25:82,0,301	0/0:21,0:17:9.37:0,9,141	0/1:16,0:15:22.26:22,0,156	0/0:36,0:32:8.14:0,8,454	0/0:14,0:12:2.61:0,3,169	0/1:29,0:22:99:101,0,164	0/0:25,0:22:22.13:0,22,419	0/1:20,0:15:4.45:72,0,4
chr10	97819281	.	CAAACACAA	C	877.97	PASS	AB=0.977;AC=17;AF=0.327;AN=52;BaseQRankSum=3.670;DP=639;FS=6.272;HRun=0;HaplotypeScore=173.7443;InbreedingCoeff=-0.3846;MQ=46.15;MQ0=68;MQRankSum=4.937;QD=2.29;ReadPosRankSum=1.946;VQSLOD=2.3478;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:28:28.59:29,0,64	0/0:8,0:7:8.14:0,8,182	./.	./.	0/1:24,0:22:44.02:44,0,242	0/1:28,0:26:15.88:16,0,369	0/0:47,0:34:44.85:0,45,733	0/0:38,0:28:32.22:0,32,385	0/1:20,0:19:21.40:21,0,470	0/0:23,0:18:6.20:0,6,498	0/0:22,0:20:21.02:0,21,414	0/1:23,0:20:38:38,0,513	0/1:16,0:15:34.20:34,0,485	0/1:13,0:11:37.60:38,0,225	0/0:17,0:13:8.83:0,9,467	1/1:15,0:12:17.72:206,18,0	0/0:37,0:32:3.71:0,4,712	0/1:21,0:20:74.28:146,0,74	0/1:11,5:13:84.03:84,0,314	0/0:15,0:13:3.55:0,4,346	0/1:62,0:50:99:175,0,523	0/1:21,0:17:21.99:22,0,284	0/1:15,0:14:42.04:42,0,198	0/1:35,0:31:27.10:27,0,837	0/1:14,0:12:19.50:19,0,265	0/1:27,0:20:82.96:89,0,83	0/0:24,0:21:0.76:0,1,605	0/0:20,0:15:21.63:0,22,151
chr10	97819287	.	CAA	C	464.42	PASS	AB=0.974;AC=13;AF=0.250;AN=52;BaseQRankSum=6.322;DP=636;FS=6.574;HRun=3;HaplotypeScore=126.4512;InbreedingCoeff=-0.0908;MQ=45.89;MQ0=66;MQRankSum=2.405;QD=1.65;ReadPosRankSum=1.732;VQSLOD=-0.3806;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:27:6.96:7,0,86	0/0:9,0:8:16.98:0,17,192	./.	./.	0/1:21,0:19:45.46:45,0,282	0/0:28,0:26:10.63:0,11,377	0/0:49,0:37:48.29:0,48,801	0/0:35,0:27:22.41:0,22,462	0/0:21,0:19:5.28:0,5,520	0/1:22,0:18:4.47:4,0,446	0/0:20,0:18:22.57:0,23,402	0/0:21,1:19:9.76:0,10,368	0/0:16,0:15:7.83:0,8,392	0/1:13,0:11:6.12:6,0,218	0/0:18,0:14:19.37:0,19,257	1/1:14,1:12:8.56:174,9,0	0/0:38,0:32:31.78:0,32,691	0/1:14,9:19:52.54:80,0,53	0/1:19,0:15:11.26:11,0,323	0/0:16,0:13:25.23:0,25,354	0/1:63,0:52:71.56:72,0,566	0/0:23,0:19:16.02:0,16,407	0/1:15,0:14:16.55:17,0,222	0/0:33,0:30:29.03:0,29,698	0/1:15,0:13:1.34:1,0,282	0/1:27,0:20:91.24:91,0,100	0/0:23,1:21:23.65:0,24,530	0/1:17,0:12:5.81:97,0,6
chr10	97819297	.	CACACACAA	C	333.73	PASS	AB=0.970;AC=12;AF=0.231;AN=52;BaseQRankSum=6.376;DP=657;FS=24.162;HRun=0;HaplotypeScore=172.1308;InbreedingCoeff=-0.2519;MQ=46.20;MQ0=68;MQRankSum=1.042;QD=1.13;ReadPosRankSum=0.027;VQSLOD=1.3321;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,17:27:61.69:124,0,62	0/1:10,0:9:3.04:3,0,186	./.	./.	0/1:19,0:17:6.42:6,0,491	0/0:26,0:24:23.70:0,24,468	0/0:52,0:40:79.21:0,79,1158	0/0:32,0:23:19.48:0,19,329	0/0:21,0:19:37.90:0,38,828	0/0:26,0:20:3.45:0,3,425	0/0:22,0:19:17.77:0,18,755	0/0:20,0:17:23.17:0,23,512	0/1:21,0:20:1.26:1,0,511	0/0:16,0:14:14.35:0,14,473	0/0:18,0:14:23.53:0,24,355	0/1:14,0:11:13.90:31,0,14	0/0:38,0:32:48.22:0,48,1086	0/1:23,0:19:37.21:37,0,77	0/1:18,0:13:4.96:5,0,533	0/0:17,0:13:26.84:0,27,490	0/1:69,0:60:37.18:37,0,938	0/1:21,0:17:10.87:11,0,684	0/0:15,0:14:20.35:0,20,486	0/0:30,0:27:39.88:0,40,1038	0/1:21,0:19:10.85:11,0,511	0/1:30,0:23:12.89:152,0,13	0/0:26,0:22:31.68:0,32,581	0/1:19,0:15:23.28:50,0,23
chr10	97819305	.	AAC	A	459.55	PASS	AB=0.966;AC=19;AF=0.352;AN=54;BaseQRankSum=5.461;DP=660;FS=4.920;HRun=0;HaplotypeScore=116.9725;InbreedingCoeff=-0.2652;MQ=46.28;MQ0=65;MQRankSum=-0.771;QD=1.04;ReadPosRankSum=-1.358;VQSLOD=2.0388;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:27:10.64:21,0,11	0/1:12,0:10:21.44:21,0,89	./.	0/0:10,0:1:2.94:0,3,18	0/1:18,0:17:29.16:29,0,203	0/1:26,0:25:34.93:35,0,215	0/1:47,2:38:22.91:23,0,417	1/1:25,1:21:6.85:55,7,0	0/0:20,0:18:22.04:0,22,358	0/0:22,0:18:15.02:0,15,192	0/0:23,0:20:27.56:0,28,399	0/0:19,0:16:23.93:0,24,313	0/1:21,1:21:32.99:33,0,276	0/1:14,0:13:5.79:6,0,226	0/1:12,5:13:18.46:18,0,100	0/1:13,0:11:19.47:46,0,19	0/1:35,1:30:20.30:20,0,425	0/1:24,0:20:19.85:49,0,20	0/0:15,0:12:15.03:0,15,191	0/1:21,0:17:9.14:9,0,255	0/1:70,0:62:63.14:63,0,506	0/0:19,0:16:24.08:0,24,350	0/1:13,2:14:34.96:35,0,268	0/0:35,0:33:48.53:0,49,590	0/0:14,0:16:22:0,22,287	0/1:34,0:27:25.72:120,0,26	0/0:26,0:22:30.01:0,30,372	1/1:8,7:11:3.01:33,3,0
chr10	97824001	.	TA	T	164.11	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=1.713;DP=361;FS=3.236;HRun=10;HaplotypeScore=44.5589;InbreedingCoeff=0.4083;MQ=63.70;MQ0=5;MQRankSum=-1.916;QD=5.86;ReadPosRankSum=2.269;VQSLOD=0.5764;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,1:18:9.93:0,10,299	0/0:9,0:9:14.97:0,15,151	0/0:12,0:7:14.99:0,15,152	0/0:17,0:13:20.32:0,20,196	0/0:16,1:17:8.90:0,9,99	1/1:1,15:15:29.95:253,30,0	0/0:16,0:16:48.09:0,48,517	0/0:18,0:15:45.11:0,45,490	0/0:17,0:17:45.02:0,45,462	0/0:17,0:17:48.08:0,48,511	0/0:12,0:12:33.05:0,33,351	0/0:4,0:3:3.01:0,3,33	0/0:8,0:7:15:0,15,152	0/0:13,1:14:4.03:0,4,273	0/0:7,0:7:14.74:0,15,165	0/0:11,0:11:18.05:0,18,199	0/0:19,0:19:36.09:0,36,390	0/0:3,0:3:6.02:0,6,66	0/0:16,0:16:30.06:0,30,322	0/0:7,0:7:18.05:0,18,199	0/0:23,2:25:37.03:0,37,610	0/0:6,0:6:5.95:0,6,51	0/0:5,0:5:15.04:0,15,166	0/0:11,0:11:21.06:0,21,232	0/1:12,0:12:14.04:14,0,77	0/0:12,0:11:27.06:0,27,290	0/0:19,0:19:50.87:0,51,540	0/0:12,0:12:33.09:0,33,365
chr10	97824787	.	CG	C	119.61	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=2.958;DP=446;FS=6.098;HRun=6;HaplotypeScore=56.7220;InbreedingCoeff=0.8445;MQ=49.28;MQ0=16;MQRankSum=-2.962;QD=7.97;ReadPosRankSum=-0.297;VQSLOD=-0.0102;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:33.11:0,33,433	0/0:10,0:10:24.05:0,24,287	./.	0/0:23,0:5:8.23:0,8,72	0/0:13,0:12:33.11:0,33,434	0/0:14,0:14:24.08:0,24,316	0/0:24,0:24:69.05:0,69,826	1/1:4,2:1:3.01:32,3,0	0/0:15,0:15:30.08:0,30,379	0/0:16,0:15:45.15:0,45,592	0/0:8,0:8:18.01:0,18,203	0/0:18,0:18:39.08:0,39,493	0/0:11,0:10:21.07:0,21,276	0/0:16,0:16:39.07:0,39,477	0/0:16,0:15:33.11:0,33,433	0/0:11,0:10:24.06:0,24,301	0/0:30,0:30:72.20:0,72,904	0/0:14,0:14:31.30:0,31,378	0/0:14,0:8:21.03:0,21,258	0/0:7,0:7:21.07:0,21,276	0/0:49,2:45:99:0,117,1487	0/0:8,0:8:24.04:0,24,295	0/0:7,0:7:18.06:0,18,237	0/0:26,0:26:63.20:0,63,818	0/0:10,0:10:24.08:0,24,310	0/0:16,0:15:42.12:0,42,535	0/0:15,0:15:39.13:0,39,512	1/1:0,9:8:18.05:193,18,0
chr10	97828373	.	C	CT	624.85	PASS	AB=0.538;AC=11;AF=0.196;AN=56;BaseQRankSum=1.844;DP=449;FS=0.000;HRun=0;HaplotypeScore=38.9319;InbreedingCoeff=0.6996;MQ=49.73;MQ0=24;MQRankSum=-4.114;QD=14.53;ReadPosRankSum=-2.658;VQSLOD=3.6019;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:11:27.09:431,27,0	0/0:7,0:7:18.06:0,18,246	0/0:16,0:4:9.03:0,9,125	0/0:24,0:2:3.01:0,3,38	0/0:21,0:18:45.15:0,45,628	0/0:16,0:16:33.11:0,33,461	0/0:14,0:14:42.14:0,42,584	1/1:3,2:1:2.98:22,3,0	0/0:12,0:11:24.08:0,24,335	0/0:16,0:15:42.14:0,42,588	0/0:18,0:16:45.15:0,45,620	0/0:18,0:18:36.07:0,36,503	0/0:9,0:9:20.66:0,21,293	0/0:15,0:15:27.09:0,27,377	0/0:20,0:20:39.13:0,39,544	0/1:1,6:3:32.76:87,0,33	0/0:26,0:26:72.22:0,72,988	1/1:2,0:1:2.97:20,3,0	0/0:18,0:11:30.07:0,30,400	0/0:22,0:16:48.16:0,48,670	0/0:49,2:39:22.20:0,22,1301	0/0:11,0:11:33.11:0,33,461	0/0:18,0:17:48.16:0,48,670	0/0:20,0:18:48.16:0,48,671	0/0:12,0:12:30.10:0,30,418	1/1:2,6:5:12.03:169,12,0	0/0:22,0:14:33.11:0,33,461	1/1:1,5:2:3.01:48,3,0
chr10	97834564	.	A	ACGAG	12363.84	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-13.735;DP=739;FS=12.747;HRun=0;HaplotypeScore=111.4131;InbreedingCoeff=0.9929;MQ=78.17;MQ0=0;MQRankSum=-6.917;QD=66.47;ReadPosRankSum=0.856;VQSLOD=6.6728;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,38:51:93.32:2595,93,0	0/0:13,0:13:39.13:0,39,768	0/0:20,0:20:51.17:0,51,951	0/0:24,0:24:56.30:0,56,1127	0/0:23,0:23:69.22:0,69,1341	0/0:16,0:16:48.16:0,48,958	0/0:21,0:21:60.19:0,60,1148	1/1:12,28:42:99:2900,111,0	0/0:30,0:30:90.31:0,90,1788	0/0:31,0:31:93.31:0,93,1816	0/0:22,0:22:63.20:0,63,1222	0/0:21,0:21:63.21:0,63,1225	0/0:27,0:27:78.27:0,78,1558	0/0:28,0:28:81.27:0,81,1573	0/0:34,0:34:99:0,102,1991	1/1:3,32:36:99:2738,99,0	0/0:30,0:30:84.27:0,84,1598	1/1:3,7:12:11.51:563,12,0	0/0:35,0:35:99:0,105,2045	0/0:17,0:17:48.16:0,48,958	0/0:44,0:44:99:0,120,2358	0/0:35,0:35:99:0,99,1942	0/0:12,0:12:33.10:0,33,604	0/0:22,0:22:66.23:0,66,1316	0/0:21,0:21:63.19:0,63,1221	1/1:1,26:28:84.29:2311,84,0	0/0:27,0:27:81.26:0,81,1582	1/1:1,15:17:45.15:1256,45,0
chr10	97840185	.	T	TAA	3839.84	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-9.480;DP=461;FS=11.921;HRun=8;HaplotypeScore=51.3585;InbreedingCoeff=0.9525;MQ=76.46;MQ0=1;MQRankSum=0.145;QD=35.23;ReadPosRankSum=-1.171;VQSLOD=2.0305;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:26:66.18:1020,66,0	0/0:9,0:9:24.06:0,24,268	0/0:9,0:10:20.71:0,21,211	0/0:10,0:10:4.81:0,5,93	0/0:38,0:38:99:0,108,1204	0/0:12,0:12:30.07:0,30,334	0/0:5,0:5:15.04:0,15,167	1/1:6,26:34:81.62:1194,82,0	0/0:13,0:13:33.08:0,33,368	0/0:24,0:24:63.15:0,63,689	0/0:29,0:29:78.19:0,78,864	0/0:9,0:9:18.03:0,18,192	0/0:10,0:10:27.07:0,27,301	0/0:13,0:13:36.10:0,36,401	0/0:10,0:10:27.06:0,27,292	0/0:8,0:8:15.01:0,15,158	0/0:21,0:20:54.09:0,54,590	1/1:4,9:13:24.08:381,24,0	0/0:19,0:19:42.07:0,42,452	0/0:27,0:27:69.15:0,69,759	0/0:15,0:15:33.08:0,33,368	0/0:8,0:8:15.03:0,15,167	0/0:15,0:15:39.08:0,39,426	0/0:6,0:6:18.05:0,18,201	0/0:23,0:23:63.15:0,63,693	1/1:3,19:21:20.72:752,21,0	0/0:18,0:18:48.10:0,48,525	1/1:2,10:14:35.09:493,35,0
chr10	97841723	.	AG	A	786.24	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.926;DP=606;FS=1.817;HRun=1;HaplotypeScore=55.2753;InbreedingCoeff=0.9909;MQ=83.88;MQ0=0;MQRankSum=-4.003;QD=35.74;ReadPosRankSum=1.870;VQSLOD=3.7944;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:63.21:881,63,0	0/0:6,0:6:18.06:0,18,288	0/0:22,0:22:63.21:0,63,989	0/0:15,0:15:41.35:0,41,604	0/0:37,0:37:99:0,111,1767	0/0:30,0:30:87.30:0,87,1391	0/0:15,0:15:45.15:0,45,720	0/0:27,0:27:81.26:0,81,1246	0/0:19,0:19:57.18:0,57,887	0/0:25,0:25:75.26:0,75,1199	0/0:28,0:28:84.29:0,84,1343	0/0:22,0:22:66.21:0,66,1032	0/0:9,0:9:27.09:0,27,432	0/0:17,0:17:51.17:0,51,808	0/0:14,0:14:42.13:0,42,641	0/0:21,0:21:63.20:0,63,977	0/0:21,0:21:60.20:0,60,958	0/0:26,0:26:75.26:0,75,1199	0/0:20,0:20:57.19:0,57,891	0/0:35,0:34:99:0,105,1678	0/0:14,0:14:42.14:0,42,663	0/0:22,0:22:66.23:0,66,1055	0/0:27,0:27:81.28:0,81,1295	0/0:14,0:14:42.14:0,42,671	0/0:17,0:17:51.17:0,51,811	0/0:31,0:31:93.32:0,93,1488	0/0:25,0:23:75.21:0,75,1165	0/0:25,0:25:75.26:0,75,1199
chr10	97843450	.	CTA	C	759.96	PASS	AB=0.553;AC=1;AF=0.019;AN=52;BaseQRankSum=3.463;DP=692;FS=4.585;HRun=0;HaplotypeScore=72.9760;InbreedingCoeff=0.3981;MQ=41.33;MQ0=91;MQRankSum=1.705;QD=29.23;ReadPosRankSum=0.396;VQSLOD=5.1510;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:40:18.01:0,18,289	0/0:5,0:3:3.01:0,3,60	./.	./.	0/0:19,0:11:15:0,15,228	0/0:25,0:25:35.84:0,36,691	0/0:24,0:18:21.07:0,21,424	0/0:21,0:4:9.03:0,9,182	0/0:27,0:27:39.12:0,39,728	0/0:28,0:23:66.22:0,66,1294	0/0:14,0:7:9.02:0,9,146	0/0:22,0:21:33.11:0,33,663	0/0:29,0:28:39.02:0,39,779	0/0:31,0:29:38.86:0,39,602	0/0:23,0:23:27.08:0,27,511	0/0:20,0:19:42.12:0,42,777	0/0:46,0:45:60.03:0,60,944	0/0:33,0:31:35.64:0,36,572	0/0:19,0:11:30.09:0,30,572	0/0:11,0:9:14.97:0,15,222	0/0:49,0:31:48.16:0,48,934	0/0:33,0:23:29.99:0,30,522	0/0:16,0:11:27.09:0,27,496	0/0:30,0:30:30.10:0,30,608	0/0:13,0:10:11.76:0,12,172	0/1:5,21:20:0.69:834,0,1	0/0:32,0:28:26.83:0,27,545	0/0:16,0:15:27.05:0,27,454
chr10	97846150	.	CA	C	566.89	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.825;DP=729;FS=1.973;HRun=2;HaplotypeScore=69.7661;InbreedingCoeff=0.9977;MQ=60.18;MQ0=9;MQRankSum=1.586;QD=28.34;ReadPosRankSum=1.617;VQSLOD=3.4374;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.18:0,54,807	0/0:9,0:9:24.08:0,24,360	0/0:27,0:15:41.95:0,42,527	0/0:29,0:20:47.83:0,48,683	0/0:28,0:28:57.17:0,57,817	0/0:34,0:34:87.27:0,87,1263	0/0:18,0:18:54.18:0,54,808	0/0:32,0:29:81.23:0,81,1138	0/0:21,0:21:54.16:0,54,769	0/0:27,0:27:78.25:0,78,1121	0/0:33,0:33:93.19:0,93,1287	0/0:21,0:21:45.14:0,45,655	0/0:20,0:20:51.17:0,51,764	0/0:27,0:27:66.21:0,66,967	0/0:28,0:28:69.23:0,69,1016	1/1:0,20:20:51.17:662,51,0	0/0:24,0:24:66.18:0,66,944	0/0:27,0:27:75.21:0,75,1098	0/0:16,0:11:33.08:0,33,471	0/0:32,0:32:90.30:0,90,1341	0/0:39,0:39:99:0,114,1643	0/0:33,0:33:81.26:0,81,1194	0/0:22,0:22:60.20:0,60,899	0/0:27,0:27:75.24:0,75,1105	0/0:23,0:23:60.19:0,60,878	0/0:28,0:28:84.26:0,84,1222	0/0:38,0:37:99:0,105,1516	0/0:27,0:27:72.24:0,72,1078
chr10	97849757	.	T	TGGTATTTAGTGTGTAGAGA	16532.47	PASS	AB=0.848;AC=9;AF=0.161;AN=56;BaseQRankSum=5.820;DP=564;FS=1.944;HRun=0;HaplotypeScore=268.2302;InbreedingCoeff=0.8463;MQ=84.65;MQ0=0;MQRankSum=-13.935;QD=160.51;ReadPosRankSum=-3.487;VQSLOD=4.1053;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,1:14:26.79:1455,27,0	0/0:10,0:10:30.10:0,30,1470	0/0:23,0:23:61.45:0,61,2633	0/0:21,0:21:32.97:0,33,2550	0/0:30,0:30:84.24:0,84,3851	0/0:25,0:25:75.24:0,75,3340	0/0:15,0:15:45.15:0,45,2160	1/1:49,0:49:99:8110,132,0	0/0:24,0:24:72.22:0,72,3316	0/0:11,0:11:33.11:0,33,1493	0/0:14,0:14:39.09:0,39,1472	0/0:20,0:20:57.15:0,57,2468	0/0:13,0:13:39.12:0,39,1900	0/0:14,0:14:42.14:0,42,2247	0/0:16,0:16:48.14:0,48,2298	0/0:13,0:13:39.12:0,39,1836	0/0:30,0:30:87.30:0,87,4367	1/1:4,1:6:9.03:759,9,0	0/0:20,0:20:54.19:0,54,2607	0/0:25,0:25:72.20:0,72,3453	0/0:18,0:18:54.19:0,54,2559	0/0:28,0:28:78.24:0,78,3665	0/0:15,0:15:42.14:0,42,2189	0/0:23,0:23:60.16:0,60,2785	0/0:23,0:23:63.20:0,63,3103	0/1:23,5:28:99:4866,0,248	0/0:30,0:30:87.30:0,87,4099	1/1:3,2:6:15.05:1343,15,0
chr10	97850190	.	A	AT	1642.98	PASS	AB=0.857;AC=11;AF=0.196;AN=56;BaseQRankSum=5.657;DP=564;FS=0.000;HRun=9;HaplotypeScore=69.6051;InbreedingCoeff=0.8310;MQ=76.40;MQ0=0;MQRankSum=-3.837;QD=15.65;ReadPosRankSum=0.244;VQSLOD=3.7177;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,1:16:29.02:145,29,0	0/1:10,2:12:0.19:0,0,227	0/0:13,0:13:22.99:0,23,181	0/0:13,0:13:14.64:0,15,120	0/0:37,0:37:55.41:0,55,719	0/0:38,0:38:99:0,102,885	0/0:15,0:15:41.96:0,42,356	1/1:5,21:25:34.02:570,34,0	0/0:10,0:10:23.98:0,24,208	0/0:25,2:27:2.61:0,3,480	0/0:22,1:23:26.77:0,27,458	0/0:13,0:13:35.99:0,36,312	0/0:11,0:11:20.97:0,21,182	0/0:15,0:15:44.96:0,45,384	0/0:27,2:29:35.78:0,36,535	0/0:17,1:18:2.75:0,3,244	0/0:18,0:18:38.96:0,39,338	1/1:2,14:17:38.94:412,39,0	0/0:23,0:23:53.96:0,54,466	0/0:32,0:31:68.95:0,69,599	0/0:17,0:17:38.98:0,39,339	0/0:22,0:23:59.01:0,59,498	0/0:23,0:23:59.94:0,60,513	0/0:15,0:15:41.99:0,42,365	0/0:18,0:18:53.95:0,54,460	1/1:8,21:29:15.31:615,15,0	0/0:27,0:27:68.94:0,69,599	1/1:3,2:5:5.97:66,6,0
chr10	97850240	.	CTGTTAA	C	773.09	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.031;DP=493;FS=3.803;HRun=0;HaplotypeScore=108.3355;InbreedingCoeff=0.9295;MQ=86.10;MQ0=0;MQRankSum=-6.136;QD=42.95;ReadPosRankSum=1.044;VQSLOD=3.3526;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:36.12:0,36,1003	0/0:12,0:12:21.07:0,21,686	0/0:25,0:25:24.08:0,24,671	0/0:16,0:16:12.01:0,12,261	0/0:13,0:13:24.08:0,24,778	0/0:29,0:29:63.22:0,63,2029	0/0:11,0:11:21.07:0,21,660	0/0:28,0:28:42.14:0,42,1278	0/0:12,0:12:30.10:0,30,978	0/0:24,0:24:45.15:0,45,1400	0/0:14,0:14:33.11:0,33,1033	0/0:13,0:13:33.11:0,33,1029	0/0:11,0:11:27.09:0,27,804	0/0:15,0:15:42.14:0,42,1347	0/0:29,0:29:69.24:0,69,2231	1/1:2,16:18:42.14:868,42,0	0/0:17,0:17:36.12:0,36,1125	0/0:12,0:12:24:0,24,471	0/0:22,0:22:37.35:0,37,1036	0/0:26,0:26:66.21:0,66,2010	0/0:17,0:17:39.13:0,39,1271	0/0:12,0:12:18.05:0,18,393	0/0:17,0:17:36.12:0,36,1049	0/0:12,0:12:21.07:0,21,601	0/0:17,0:17:42.12:0,42,1298	0/0:18,0:18:36.12:0,36,1125	0/0:28,0:28:69.24:0,69,2221	0/0:6,0:6:15.05:0,15,490
chr10	97850595	.	T	TTGC	846.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.112;DP=402;FS=2.179;HRun=0;HaplotypeScore=58.3838;InbreedingCoeff=0.8016;MQ=72.80;MQ0=0;MQRankSum=-2.282;QD=36.81;ReadPosRankSum=-0.363;VQSLOD=3.6593;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,17:23:45.15:941,45,0	0/0:5,0:5:9.03:0,9,137	0/0:9,0:8:24.03:0,24,334	0/0:12,0:12:20.66:0,21,277	0/0:15,0:15:24.08:0,24,362	0/0:18,0:18:51.16:0,51,755	0/0:10,0:10:30.06:0,30,430	0/0:22,0:21:45.15:0,45,684	0/0:8,0:8:21.05:0,21,297	0/0:16,0:16:42.14:0,42,638	0/0:8,0:8:9.03:0,9,134	0/0:11,0:11:33.11:0,33,502	0/0:17,0:17:48.16:0,48,721	0/0:23,0:23:66.17:0,66,957	0/0:13,0:13:30.08:0,30,434	0/0:18,0:18:48.15:0,48,709	0/0:19,0:19:45.15:0,45,684	0/0:5,0:5:12.01:0,12,158	0/0:13,0:13:27.09:0,27,410	0/0:15,0:15:33.10:0,33,478	0/0:19,0:19:48.16:0,48,729	0/0:8,0:8:15.05:0,15,224	0/0:10,0:10:9.03:0,9,137	0/0:8,0:8:18.06:0,18,274	0/0:21,0:21:39.13:0,39,593	0/0:14,0:14:33.11:0,33,500	0/0:26,0:24:60.20:0,60,908	0/0:16,0:16:48.16:0,48,730
chr10	97850747	.	CTTTG	C	1921.17	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.663;DP=376;FS=0.000;HRun=0;HaplotypeScore=76.8011;InbreedingCoeff=0.9684;MQ=74.48;MQ0=0;MQRankSum=-7.096;QD=30.99;ReadPosRankSum=0.449;VQSLOD=3.4027;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:23.77:439,24,0	0/0:7,0:7:21.07:0,21,560	0/0:29,0:19:39.21:0,39,766	0/0:12,0:6:12.02:0,12,183	0/0:15,0:15:39.12:0,39,906	0/0:12,0:12:36.10:0,36,823	0/0:6,0:6:18.06:0,18,429	1/1:3,8:8:18.06:333,18,0	0/0:13,0:13:39.12:0,39,980	0/0:10,0:10:27.09:0,27,680	0/0:14,0:14:36.04:0,36,854	0/0:18,0:18:42.13:0,42,1018	0/0:18,0:18:45.15:0,45,1073	0/0:11,0:11:27.09:0,27,595	0/0:15,0:15:42.14:0,42,1074	0/0:21,0:21:47.83:0,48,1045	0/0:18,0:18:48.10:0,48,1088	1/1:4,3:7:18.03:299,18,0	0/0:11,0:11:27.07:0,27,612	0/0:17,0:17:48.16:0,48,1181	0/0:10,0:10:21.07:0,21,507	0/0:6,0:6:9.03:0,9,240	0/0:7,0:7:21.07:0,21,555	0/0:11,0:11:24.03:0,24,509	0/0:13,0:13:36.11:0,36,855	1/1:0,13:13:36.11:634,36,0	0/0:20,0:20:54.17:0,54,1305	1/1:3,4:7:21.07:390,21,0
chr10	97850772	.	TTTTG	T	755.33	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.673;DP=375;FS=17.094;HRun=0;HaplotypeScore=82.2519;InbreedingCoeff=0.9130;MQ=72.80;MQ0=2;MQRankSum=-5.513;QD=18.88;ReadPosRankSum=0.357;VQSLOD=2.0705;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:4.72:0,5,193	0/0:7,0:7:21.07:0,21,430	0/0:22,0:12:26.62:0,27,295	0/0:14,0:8:14.65:0,15,141	0/0:18,0:18:54.17:0,54,1099	0/0:10,0:10:27.07:0,27,450	0/0:5,0:5:15.03:0,15,338	1/1:8,7:13:33.01:423,33,0	0/0:11,0:11:30.10:0,30,554	0/0:17,0:17:51.13:0,51,955	0/0:16,0:16:45.12:0,45,856	0/0:15,0:15:45.12:0,45,845	0/0:20,0:20:60.17:0,60,1123	0/0:12,0:12:32.99:0,33,625	0/0:15,0:15:45.14:0,45,989	0/0:14,0:14:29.60:0,30,366	0/0:19,0:19:57.07:0,57,1041	1/1:8,0:8:5.82:41,6,0	0/0:9,0:9:27.05:0,27,441	0/0:16,0:16:48.15:0,48,1071	0/0:7,0:7:21.06:0,21,420	0/0:7,0:7:21.04:0,21,339	0/0:14,0:14:42.11:0,42,829	0/0:9,0:9:17.69:0,18,369	0/0:16,0:16:48.15:0,48,972	1/1:11,1:12:28.64:205,29,0	0/0:18,0:18:51.15:0,51,983	1/1:1,4:5:15.05:238,15,0
chr10	97850773	.	TTTG	T	863.98	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=3.989;DP=373;FS=4.842;HRun=0;HaplotypeScore=74.3406;InbreedingCoeff=0.7826;MQ=70.65;MQ0=2;MQRankSum=-5.232;QD=13.94;ReadPosRankSum=-0.193;VQSLOD=2.8479;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:98.26:98,0,113	0/0:7,0:7:21.07:0,21,358	0/0:22,0:12:10.86:0,11,180	0/0:13,0:8:16.70:0,17,147	0/0:18,0:18:54.14:0,54,888	0/0:9,0:9:27.06:0,27,378	0/0:5,0:5:12.04:0,12,258	1/1:13,0:13:32.88:286,33,0	0/0:10,0:10:30.06:0,30,411	0/0:17,0:17:50.86:0,51,771	0/0:16,0:16:45.11:0,45,712	0/0:15,0:15:42.09:0,42,644	0/0:20,0:20:57.13:0,57,915	0/0:12,0:12:28.61:0,29,476	0/0:15,0:15:45.12:0,45,801	0/0:15,0:15:1.39:0,1,202	0/0:19,0:19:53.73:0,54,831	1/1:5,3:8:11.63:142,12,0	0/0:9,0:9:27.01:0,27,335	0/0:16,0:16:48.14:0,48,893	0/0:8,0:8:21.05:0,21,336	0/0:7,0:7:21.01:0,21,272	0/0:14,0:14:42.10:0,42,697	0/0:9,0:9:17.69:0,18,306	0/0:16,0:16:48.12:0,48,790	1/1:6,4:11:29.99:353,30,0	0/0:18,0:18:51.12:0,51,819	1/1:5,0:5:15.02:144,15,0
chr10	97850774	.	TTG	T	639.88	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=4.483;DP=364;FS=1.596;HRun=0;HaplotypeScore=67.2840;InbreedingCoeff=0.5994;MQ=69.94;MQ0=2;MQRankSum=-5.179;QD=6.60;ReadPosRankSum=0.004;VQSLOD=2.6021;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:40.81:41,0,57	0/0:7,0:7:20.99:0,21,270	0/1:20,0:11:15.25:15,0,130	0/0:13,0:8:15.05:0,15,114	0/0:18,0:18:51:0,51,670	0/0:10,0:10:29.99:0,30,325	0/0:4,0:4:12.04:0,12,202	1/1:15,0:14:35.48:277,35,0	0/0:10,0:10:26.74:0,27,269	0/0:17,0:17:40.61:0,41,565	0/0:15,0:15:44.98:0,45,568	0/0:14,0:14:35.93:0,36,432	0/0:19,0:19:53.94:0,54,698	0/0:12,0:12:1.10:0,1,303	0/0:15,0:15:42.06:0,42,611	0/1:15,0:15:26.95:27,0,89	0/0:19,0:19:39.79:0,40,611	1/1:3,5:8:11.99:108,12,0	0/0:8,0:8:17.95:0,18,205	0/0:17,0:17:51:0,51,729	0/0:7,0:7:20.92:0,21,252	0/0:6,0:6:18:0,18,194	0/0:14,0:14:42.01:0,42,534	0/0:8,0:8:17.90:0,18,237	0/0:16,0:16:44.97:0,45,579	1/1:11,0:11:29.75:224,30,0	0/0:18,0:18:47.90:0,48,593	1/1:5,0:5:14.94:115,15,0
chr10	97852147	.	TGCA	T	820.48	PASS	AB=0.512;AC=1;AF=0.018;AN=56;BaseQRankSum=6.841;DP=651;FS=14.560;HRun=0;HaplotypeScore=86.2114;InbreedingCoeff=0.0668;MQ=58.96;MQ0=0;MQRankSum=1.048;QD=39.07;ReadPosRankSum=0.591;VQSLOD=3.7730;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,102,2411	0/0:12,0:12:33.11:0,33,780	0/0:22,1:16:18.46:0,18,871	0/0:19,0:17:48.16:0,48,1119	0/0:41,0:40:99:0,117,2765	0/0:27,0:27:66.23:0,66,1534	0/0:12,0:12:27.09:0,27,635	0/0:31,0:30:75.26:0,75,1745	0/0:27,0:26:75.26:0,75,1704	0/0:30,0:29:87.28:0,87,1991	0/0:27,0:27:75.26:0,75,1752	0/0:22,0:22:63.22:0,63,1490	0/0:23,0:23:57.20:0,57,1345	0/0:25,0:25:69.24:0,69,1607	0/0:23,0:23:54.19:0,54,1277	0/1:1,20:21:13.28:895,0,13	0/0:22,0:21:42.14:0,42,992	0/0:15,0:15:42.14:0,42,991	0/0:21,0:18:54.19:0,54,1263	0/0:24,0:24:66.23:0,66,1559	0/0:16,0:16:45.15:0,45,1063	0/0:23,0:23:60.21:0,60,1417	0/0:20,0:20:57.20:0,57,1347	0/0:17,0:17:45.15:0,45,1060	0/0:24,0:24:60.21:0,60,1419	0/0:26,0:26:78.27:0,78,1844	0/0:27,0:27:77.84:0,78,1839	0/0:12,0:12:33.11:0,33,780
chr10	97853063	.	AT	A	370.13	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=5.771;DP=568;FS=0.978;HRun=7;HaplotypeScore=49.3312;InbreedingCoeff=0.9493;MQ=51.86;MQ0=27;MQRankSum=-2.428;QD=14.81;ReadPosRankSum=-0.266;VQSLOD=2.9190;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,18:21:25.38:463,25,0	0/0:6,0:5:15.04:0,15,176	0/0:13,0:4:12.03:0,12,138	./.	0/0:27,0:26:72.04:0,72,858	0/0:19,0:19:48.14:0,48,591	0/0:12,0:11:30.10:0,30,377	0/0:39,0:24:63.13:0,63,759	0/0:16,0:15:39.12:0,39,491	0/0:26,0:25:69.21:0,69,859	0/0:33,0:30:84.26:0,84,1044	0/0:14,0:12:33.08:0,33,391	0/0:22,0:22:48.14:0,48,589	0/0:17,0:16:39.11:0,39,478	0/0:15,0:14:36.09:0,36,429	0/0:15,0:13:36.12:0,36,453	0/0:36,0:32:66.13:0,66,786	0/0:24,0:22:48.15:0,48,604	0/0:19,0:16:42.11:0,42,503	0/0:29,0:29:72.23:0,72,906	0/0:10,0:9:27:0,27,319	0/0:16,0:15:30.10:0,30,377	0/0:19,0:16:45.14:0,45,564	0/0:14,0:14:24.08:0,24,302	0/0:16,0:13:33.11:0,33,415	0/0:14,0:14:36.12:0,36,453	0/0:36,0:32:78.14:0,78,959	0/0:34,0:32:63.20:0,63,793
chr10	97853488	.	CAA	C	1917.84	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.217;DP=604;FS=5.637;HRun=2;HaplotypeScore=70.6206;InbreedingCoeff=0.9834;MQ=68.72;MQ0=0;MQRankSum=0.701;QD=43.59;ReadPosRankSum=0.866;VQSLOD=3.4566;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.10:0,48,873	0/0:11,0:11:33.11:0,33,667	0/0:25,0:25:51.25:0,51,1386	0/0:16,0:16:47.99:0,48,823	0/0:30,0:30:90.31:0,90,1828	0/0:26,0:26:78.27:0,78,1574	0/0:12,0:12:36.12:0,36,712	0/0:25,0:25:75.26:0,75,1506	0/0:17,0:17:51.16:0,51,1000	0/0:28,0:28:84.27:0,84,1645	0/0:36,0:36:99:0,108,2172	0/0:24,0:24:72.25:0,72,1463	0/0:17,0:17:51.18:0,51,1027	0/0:24,0:24:72.23:0,72,1398	0/0:25,0:25:75.26:0,75,1525	0/0:19,0:18:57.20:0,57,1159	0/0:12,0:12:36.12:0,36,731	1/1:0,7:7:15.05:244,15,0	0/0:15,0:15:45.15:0,45,908	0/0:31,0:31:90.29:0,90,1761	0/0:22,0:22:66.23:0,66,1341	0/0:19,0:19:57.20:0,57,1150	0/0:27,0:27:81.24:0,81,1566	0/0:22,0:22:66.23:0,66,1309	0/0:26,0:26:72.25:0,72,1434	1/1:0,37:37:99:1792,111,0	0/0:29,0:28:87.30:0,87,1704	0/0:5,0:5:15.05:0,15,305
chr10	97853503	.	ATCC	A	1418.44	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.842;DP=608;FS=4.364;HRun=0;HaplotypeScore=87.2038;InbreedingCoeff=0.9904;MQ=75.39;MQ0=0;MQRankSum=-0.555;QD=41.72;ReadPosRankSum=-3.986;VQSLOD=3.5077;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.20:0,57,1251	0/0:8,0:8:24.08:0,24,536	0/0:29,0:29:78.26:0,78,1655	0/0:16,0:16:42.14:0,42,895	0/0:29,0:29:81.28:0,81,1808	0/0:27,0:27:81.28:0,81,1794	0/0:11,0:11:30.10:0,30,670	1/1:2,26:28:78.26:1244,78,0	0/0:20,0:20:60.21:0,60,1340	0/0:31,0:31:87.30:0,87,1919	0/0:30,0:30:84.29:0,84,1875	0/0:22,0:22:63.22:0,63,1392	0/0:17,0:17:51.18:0,51,1132	0/0:20,0:20:60.21:0,60,1340	0/0:30,0:30:90.31:0,90,1993	0/0:23,0:22:63.20:0,63,1365	0/0:13,0:13:39.13:0,39,869	0/0:7,0:7:18.06:0,18,401	0/0:15,0:15:45.15:0,45,992	0/0:30,0:30:87.30:0,87,1891	0/0:21,0:21:63.20:0,63,1364	0/0:17,0:17:51.18:0,51,1138	0/0:27,0:27:78.27:0,78,1741	0/0:22,0:22:66.18:0,66,1425	0/0:25,0:25:66.23:0,66,1474	0/0:35,0:35:99:0,99,2212	0/0:30,0:29:84.29:0,84,1841	1/1:0,6:6:18.06:294,18,0
chr10	97854015	.	A	AG	1210.58	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-4.383;DP=502;FS=1.316;HRun=8;HaplotypeScore=56.1329;InbreedingCoeff=0.8618;MQ=86.45;MQ0=0;MQRankSum=-4.830;QD=21.62;ReadPosRankSum=-0.713;VQSLOD=3.4984;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,20:29:63:719,63,0	0/0:13,0:13:1.37:0,1,169	0/0:12,0:11:26.94:0,27,230	0/0:26,0:26:67.07:0,67,583	0/0:15,0:15:33.01:0,33,301	0/0:15,0:15:42.02:0,42,384	0/0:30,0:30:78.03:0,78,714	0/0:19,0:19:30:0,30,274	0/0:20,0:20:57.03:0,57,521	0/0:9,0:9:21.01:0,21,190	0/0:6,0:6:15.01:0,15,137	0/0:16,0:16:48.03:0,48,439	0/0:18,0:19:41.05:0,41,363	0/0:20,0:20:46.53:0,47,402	0/0:17,0:17:39.01:0,39,356	0/0:20,0:20:57.03:0,57,522	0/0:15,0:15:36.01:0,36,329	1/1:0,10:10:21.06:242,21,0	0/0:14,0:14:39.01:0,39,357	0/0:18,0:18:45.02:0,45,411	0/0:49,0:49:99:0,117,1061	0/0:14,0:14:36.01:0,36,328	0/0:15,0:15:41.96:0,42,374	0/0:28,0:28:72.02:0,72,659	0/0:12,0:12:7.03:0,7,248	1/1:5,12:17:11.76:387,12,0	0/0:20,0:19:42:0,42,384	0/0:4,0:4:9:0,9,82
chr10	97854690	.	G	GT	5379.76	PASS	AB=0.519;AC=11;AF=0.196;AN=56;BaseQRankSum=-1.411;DP=615;FS=0.380;HRun=1;HaplotypeScore=59.6958;InbreedingCoeff=0.9248;MQ=63.77;MQ0=0;MQRankSum=2.481;QD=42.03;ReadPosRankSum=-0.043;VQSLOD=5.0227;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:87.30:1390,87,0	0/0:8,0:8:21.07:0,21,294	0/0:13,0:11:27.08:0,27,355	0/0:13,0:12:18.22:0,18,343	0/0:30,0:30:87.28:0,87,1194	0/0:15,0:15:45.12:0,45,595	0/0:21,0:21:60.18:0,60,819	1/1:1,17:15:45.14:687,45,0	0/0:23,0:23:69.23:0,69,964	0/0:29,0:29:87.28:0,87,1201	0/0:14,0:14:42.14:0,42,587	0/0:20,0:20:60.20:0,60,839	0/0:22,0:22:66.19:0,66,888	0/0:16,0:16:48.16:0,48,669	0/0:17,0:17:51.14:0,51,678	1/1:2,19:21:54.18:863,54,0	0/0:35,0:35:99:0,99,1365	1/1:0,21:21:63.21:992,63,0	0/0:23,0:23:69.22:0,69,949	0/0:27,0:27:81.26:0,81,1115	0/0:56,0:55:99:0,166,2306	0/0:23,0:23:66.22:0,66,918	0/0:20,0:20:60.20:0,60,836	0/0:22,0:22:66.19:0,66,901	0/0:21,0:21:63.21:0,63,881	0/1:2,25:27:2.67:1112,0,3	0/0:19,0:19:57.18:0,57,779	1/1:1,7:8:21.07:336,21,0
chr10	97856007	.	A	AT	672.91	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-3.419;DP=597;FS=2.423;HRun=9;HaplotypeScore=60.1045;InbreedingCoeff=0.7896;MQ=65.89;MQ0=2;MQRankSum=0.524;QD=11.60;ReadPosRankSum=-0.153;VQSLOD=2.8038;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,16:23:39.11:431,39,0	0/0:13,0:13:35.98:0,36,309	0/1:18,0:13:8.47:8,0,130	0/0:16,0:16:11.54:0,12,166	0/0:33,0:33:89.92:0,90,774	0/0:18,0:18:48.46:0,48,418	0/0:24,1:25:23.78:0,24,436	0/0:22,0:22:44.97:0,45,391	0/0:15,0:15:41.98:0,42,365	0/0:29,1:30:50.80:0,51,670	0/0:22,0:22:59.99:0,60,521	0/0:12,0:12:29.99:0,30,260	0/0:19,0:19:50.96:0,51,437	0/0:15,0:15:38.98:0,39,339	0/0:23,0:23:59.95:0,60,514	0/0:18,0:18:50.98:0,51,443	0/0:24,0:24:65.89:0,66,560	1/1:6,11:17:29.99:360,30,0	0/0:31,0:29:71.90:0,72,610	0/0:32,0:32:86.98:0,87,755	0/0:13,0:15:37.06:0,37,298	0/0:18,0:18:47.97:0,48,413	0/0:26,0:27:68.02:0,68,579	0/0:20,0:20:47.98:0,48,416	0/0:15,0:16:47.03:0,47,397	0/0:33,0:34:89.01:0,89,761	0/0:31,0:31:82.99:0,83,704	0/0:10,0:10:29.99:0,30,260
chr10	97856361	.	TG	T	864.44	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.785;DP=563;FS=0.000;HRun=1;HaplotypeScore=55.9377;InbreedingCoeff=0.9891;MQ=91.46;MQ0=1;MQRankSum=-3.213;QD=34.58;ReadPosRankSum=1.317;VQSLOD=3.3050;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:69.23:959,69,0	0/0:13,0:13:39.12:0,39,596	0/0:14,0:14:25.99:0,26,489	0/0:31,0:31:67.19:0,67,1091	0/0:26,0:26:75.22:0,75,1139	0/0:27,0:27:78.25:0,78,1222	0/0:11,0:11:33.11:0,33,527	0/0:20,0:20:45.14:0,45,676	0/0:20,0:20:60.19:0,60,935	0/0:28,0:28:81.26:0,81,1251	0/0:25,0:25:72.23:0,72,1127	0/0:17,0:17:51.16:0,51,792	0/0:30,0:30:90.27:0,90,1381	0/0:23,0:23:69.21:0,69,1054	0/0:30,0:30:90.25:0,90,1345	0/0:11,0:11:33.10:0,33,504	0/0:18,0:17:48.16:0,48,767	0/0:9,0:9:27.07:0,27,407	0/0:14,0:14:39.13:0,39,615	0/0:28,0:28:81.26:0,81,1271	0/0:22,0:22:60.15:0,60,875	0/0:17,0:17:48.16:0,48,761	0/0:15,0:15:45.12:0,45,671	0/0:20,0:20:60.20:0,60,954	0/0:21,0:21:60.18:0,60,929	0/0:17,0:17:49.05:0,49,767	0/0:25,0:25:75.09:0,75,988	0/0:6,0:6:18.06:0,18,287
chr10	97857048	.	C	CA	790.83	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=-2.827;DP=410;FS=5.481;HRun=0;HaplotypeScore=53.2877;InbreedingCoeff=0.6745;MQ=77.63;MQ0=2;MQRankSum=1.630;QD=11.80;ReadPosRankSum=-4.152;VQSLOD=2.6044;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:9.15:9,0,20	0/0:10,0:10:24.04:0,24,298	0/0:30,0:21:38.85:0,39,401	0/1:15,0:12:3.27:3,0,186	0/0:16,0:16:47.74:0,48,532	0/0:15,0:15:38.76:0,39,461	0/0:10,0:10:30.03:0,30,344	1/1:2,19:21:54.06:624,54,0	0/0:16,0:16:45.12:0,45,576	0/0:21,0:21:60.16:0,60,786	0/0:15,0:15:44.71:0,45,556	0/0:15,0:15:42.12:0,42,550	0/0:18,0:18:43.16:0,43,536	0/0:14,0:14:42.11:0,42,537	0/0:13,0:13:35.88:0,36,446	0/0:11,0:10:8.09:0,8,36	0/0:13,0:13:37.66:0,38,485	0/0:8,0:8:12.18:0,12,44	0/0:9,0:9:27.06:0,27,305	0/0:18,0:18:54.12:0,54,692	0/0:25,0:25:61.46:0,61,673	0/0:13,0:13:39.10:0,39,496	0/0:14,0:14:42.14:0,42,581	0/0:12,0:12:33.05:0,33,389	0/0:13,0:13:36.09:0,36,440	1/1:2,0:14:7.97:204,8,0	0/0:14,0:14:33.09:0,33,433	1/1:1,4:5:6.02:86,6,0
chr10	97858722	.	TTC	T	1561.03	PASS	AB=0.515;AC=3;AF=0.054;AN=56;BaseQRankSum=9.785;DP=668;FS=2.059;HRun=0;HaplotypeScore=85.3397;InbreedingCoeff=0.6533;MQ=82.03;MQ0=0;MQRankSum=-3.624;QD=35.48;ReadPosRankSum=2.270;VQSLOD=5.4928;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.30:0,87,1680	0/0:8,0:8:21.05:0,21,365	0/0:23,0:23:66.17:0,66,1124	0/0:12,0:12:32.94:0,33,571	0/0:38,0:38:99:0,114,2185	0/0:19,0:19:57.20:0,57,1086	0/0:23,0:23:63.21:0,63,1179	0/0:23,0:23:69.23:0,69,1274	0/0:30,0:30:87.30:0,87,1672	0/0:34,0:34:99:0,102,1908	0/0:29,0:29:84.29:0,84,1599	0/0:23,0:23:69.24:0,69,1333	0/0:25,0:25:75.26:0,75,1447	0/0:27,0:27:81.26:0,81,1524	0/0:21,0:21:63.22:0,63,1210	0/0:24,0:24:72.25:0,72,1390	0/0:21,0:21:63.22:0,63,1184	1/1:1,9:10:24.08:367,24,0	0/0:29,0:29:87.28:0,87,1585	0/0:35,0:35:99:0,105,2021	0/0:15,0:15:45.15:0,45,857	0/0:21,0:21:63.22:0,63,1217	0/0:24,0:24:72.25:0,72,1367	0/0:23,0:23:69.24:0,69,1303	0/0:18,0:18:54.19:0,54,1035	0/1:2,32:34:16.64:1299,0,17	0/0:40,0:40:99:0,120,2283	0/0:9,0:9:27.09:0,27,521
chr10	97861118	.	C	CT	2328.11	PASS	AB=0.593;AC=10;AF=0.179;AN=56;BaseQRankSum=-8.798;DP=571;FS=4.686;HRun=9;HaplotypeScore=56.9927;InbreedingCoeff=0.8155;MQ=84.39;MQ0=0;MQRankSum=-1.933;QD=22.60;ReadPosRankSum=-2.670;VQSLOD=3.5031;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:39.02:415,39,0	0/0:11,0:11:26.98:0,27,232	0/0:18,0:18:23.17:0,23,274	0/0:25,0:24:24.16:0,24,232	0/0:27,1:28:44.76:0,45,611	0/0:27,0:26:74.98:0,75,651	0/0:9,0:9:23.99:0,24,208	1/1:5,18:24:50.14:560,50,0	0/0:21,0:21:62.98:0,63,544	0/0:25,0:25:62.95:0,63,545	0/0:21,0:21:29.58:0,30,413	0/0:13,0:13:32.98:0,33,286	0/0:20,0:20:59.94:0,60,509	0/0:23,0:24:65.01:0,65,549	0/0:25,0:25:65.95:0,66,566	1/1:3,15:18:13.05:372,13,0	0/0:15,0:15:38.97:0,39,334	0/1:3,5:8:0.17:148,0,0	0/0:20,0:20:59.95:0,60,513	0/0:37,0:37:92.90:0,93,793	0/0:19,0:19:50.95:0,51,434	0/0:26,0:27:73.95:0,74,616	0/0:20,0:20:50.96:0,51,436	0/0:11,0:11:29.99:0,30,260	0/0:18,0:18:41.98:0,42,362	1/1:4,28:32:38.08:855,38,0	0/0:34,0:34:89.93:0,90,774	0/1:2,6:8:23.21:145,0,23
chr10	97861929	.	AG	A	1204.51	PASS	AB=0.938;AC=11;AF=0.196;AN=56;BaseQRankSum=16.058;DP=713;FS=0.739;HRun=2;HaplotypeScore=96.5617;InbreedingCoeff=0.8940;MQ=76.93;MQ0=0;MQRankSum=-0.916;QD=7.44;ReadPosRankSum=-0.538;VQSLOD=0.6035;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:50,0:50:55.15:260,55,0	0/0:10,0:10:30.10:0,30,449	0/0:14,0:15:26.56:0,27,366	0/1:14,0:15:10.66:11,0,194	0/0:34,0:34:99:0,99,1481	0/0:24,0:24:72.23:0,72,1060	0/0:17,0:17:48.16:0,48,717	1/1:35,6:41:95.15:648,95,0	0/0:29,0:29:81.27:0,81,1211	0/0:24,0:24:69.23:0,69,1034	0/0:29,0:29:87.29:0,87,1300	0/0:14,0:14:42.14:0,42,629	0/0:25,0:25:75.22:0,75,1064	0/0:21,0:21:63.21:0,63,943	0/0:28,0:28:81.25:0,81,1176	0/0:26,0:26:75.23:0,75,1082	0/0:28,0:28:84.27:0,84,1240	1/1:14,0:14:24.16:93,24,0	0/0:27,0:27:78.26:0,78,1169	0/0:27,0:27:78.26:0,78,1168	0/0:48,0:48:99:0,135,1978	0/0:25,0:25:72.24:0,72,1077	0/0:23,0:23:69.22:0,69,1001	0/0:25,0:25:75.25:0,75,1124	0/0:18,0:18:51.16:0,51,744	1/1:27,0:27:24.30:252,24,0	0/0:34,0:33:96.31:0,96,1417	1/1:15,0:15:35.24:119,35,0
chr10	97862084	.	ACTTGG	A	1798.33	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.829;DP=622;FS=1.470;HRun=0;HaplotypeScore=112.3671;InbreedingCoeff=0.9951;MQ=83.56;MQ0=0;MQRankSum=-4.418;QD=51.38;ReadPosRankSum=0.873;VQSLOD=4.1583;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:90.25:1893,90,0	0/0:10,0:10:30.10:0,30,888	0/0:18,0:18:48.10:0,48,1266	0/0:18,0:18:51.17:0,51,1259	0/0:32,0:32:96.29:0,96,2856	0/0:30,0:30:87.28:0,87,2666	0/0:14,0:14:42.14:0,42,1333	0/0:31,0:31:90.29:0,90,2574	0/0:29,0:29:87.28:0,87,2665	0/0:30,0:30:84.27:0,84,2464	0/0:30,0:30:87.30:0,87,2728	0/0:14,0:14:42.14:0,42,1333	0/0:22,0:22:66.23:0,66,2072	0/0:18,0:18:54.17:0,54,1529	0/0:21,0:21:63.22:0,63,1997	0/0:18,0:18:54.17:0,54,1639	0/0:22,0:22:66.23:0,66,2093	0/0:7,0:7:21.07:0,21,666	0/0:17,0:17:51.15:0,51,1545	0/0:34,0:34:96.33:0,96,2882	0/0:19,0:19:57.20:0,57,1758	0/0:22,0:22:66.23:0,66,2044	0/0:16,0:16:48.16:0,48,1520	0/0:28,0:28:81.28:0,81,2545	0/0:11,0:11:33.11:0,33,1047	0/0:24,0:24:69.23:0,69,2120	0/0:34,0:34:96.33:0,96,2970	0/0:18,0:18:54.12:0,54,1561
chr10	97863475	.	CA	C	2368.23	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=9.945;DP=716;FS=1.398;HRun=7;HaplotypeScore=66.2105;InbreedingCoeff=0.8692;MQ=56.15;MQ0=6;MQRankSum=2.206;QD=19.57;ReadPosRankSum=-2.367;VQSLOD=2.8474;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:34:87.20:887,87,0	0/0:21,0:21:63.20:0,63,793	0/0:27,0:13:28.39:0,28,345	0/1:14,0:10:16.07:16,0,92	0/0:25,0:25:69.18:0,69,848	0/0:25,0:25:69.22:0,69,868	0/0:18,0:18:45.07:0,45,532	1/1:4,18:16:33.07:336,33,0	0/0:23,0:23:66.14:0,66,810	0/0:37,0:37:99:0,105,1306	0/0:27,0:27:66.12:0,66,795	0/0:21,0:21:63.19:0,63,779	0/0:30,0:30:75.23:0,75,925	0/0:35,0:35:93.22:0,93,1113	0/0:28,0:28:81.25:0,81,1007	0/0:18,0:18:51.14:0,51,617	0/0:41,0:41:99:0,99,1244	1/1:4,24:28:69.15:704,69,0	0/0:31,0:26:69.19:0,69,841	0/0:22,0:22:60.17:0,60,739	0/0:30,0:30:84.27:0,84,1055	0/0:25,0:25:66.18:0,66,814	0/0:22,0:22:63.20:0,63,792	0/0:30,0:30:81.26:0,81,1018	0/0:22,0:22:63.16:0,63,763	1/1:2,14:16:7.35:385,7,0	0/0:37,0:37:99:0,99,1245	1/1:0,7:7:21.05:214,21,0
chr10	97864130	.	CA	C	3008.33	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.808;DP=575;FS=9.435;HRun=9;HaplotypeScore=64.0799;InbreedingCoeff=0.9876;MQ=62.93;MQ0=7;MQRankSum=-2.242;QD=22.12;ReadPosRankSum=0.826;VQSLOD=4.2656;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:75.03:685,75,0	0/0:12,0:12:33.10:0,33,381	0/0:26,0:10:13.68:0,14,144	0/0:23,1:14:23.90:0,24,224	0/0:25,0:25:63.19:0,63,724	0/0:20,0:20:48.13:0,48,546	0/0:8,0:8:18.05:0,18,208	1/1:3,26:29:78.01:705,78,0	0/0:16,0:16:48.14:0,48,554	0/0:29,0:29:77.82:0,78,919	0/0:30,0:31:82.32:0,82,918	0/0:6,0:6:18.05:0,18,208	0/0:12,0:12:27.08:0,27,312	0/0:9,0:9:24.06:0,24,268	0/0:20,0:20:57.17:0,57,658	0/0:4,0:17:48.93:0,49,297	0/0:20,0:20:45.08:0,45,503	1/1:4,21:25:57.02:521,57,0	0/0:30,0:30:72.21:0,72,831	0/0:35,0:35:96.27:0,96,1098	0/0:7,0:7:18.04:0,18,198	0/0:21,1:22:29.69:0,30,586	0/0:22,0:22:51.14:0,51,579	0/0:10,0:10:23.98:0,24,247	0/0:16,0:16:48.11:0,48,532	1/1:4,25:29:43.39:641,43,0	0/0:20,0:21:60.01:0,60,672	1/1:2,23:25:69.03:631,69,0
chr10	97864788	.	GATAAGGACACTTC	G	2880.48	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.372;DP=669;FS=10.880;HRun=0;HaplotypeScore=231.8832;InbreedingCoeff=0.9989;MQ=59.50;MQ0=2;MQRankSum=-6.001;QD=61.29;ReadPosRankSum=-0.859;VQSLOD=1.9566;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.10:0,72,4129	0/0:11,0:11:27.09:0,27,1684	0/0:26,0:20:54.18:0,54,2510	0/0:21,0:17:44.63:0,45,2089	0/0:36,0:36:99:0,105,6494	0/0:21,0:21:57.20:0,57,3638	0/0:19,0:19:51.16:0,51,2973	1/1:5,20:20:45.15:1444,45,0	0/0:21,0:21:60.21:0,60,3616	0/0:36,0:36:99:0,102,6244	0/0:21,0:21:63.20:0,63,3569	0/0:23,0:23:63.22:0,63,3950	0/0:17,0:17:48.16:0,48,2846	0/0:16,0:16:48.16:0,48,2996	0/0:22,0:22:66.23:0,66,4351	0/0:17,0:17:48.16:0,48,2878	0/0:26,0:26:66.23:0,66,3720	0/0:24,0:24:63.22:0,63,3379	0/0:30,0:24:69.23:0,69,3721	0/0:39,0:39:99:0,117,7166	0/0:23,0:23:63.20:0,63,3776	0/0:19,0:19:54.19:0,54,3291	0/0:23,0:23:66.21:0,66,3993	0/0:10,0:10:27.09:0,27,1561	0/0:26,0:25:78.27:0,78,4644	0/0:22,0:21:63.22:0,63,3908	0/0:46,0:46:99:0,132,8191	1/1:5,17:22:39.13:1558,39,0
chr10	97865294	.	AG	A	663.73	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.344;DP=638;FS=0.000;HRun=2;HaplotypeScore=54.1945;InbreedingCoeff=0.8487;MQ=56.05;MQ0=8;MQRankSum=0.862;QD=25.53;ReadPosRankSum=0.423;VQSLOD=3.2567;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:26:60.14:758,60,0	0/0:10,0:10:30.09:0,30,430	0/0:20,0:9:27.09:0,27,392	0/0:8,0:2:3.01:0,3,45	0/0:37,0:37:99:0,111,1619	0/0:30,0:29:87.29:0,87,1304	0/0:9,0:9:27.09:0,27,405	0/0:37,0:36:99:0,102,1526	0/0:23,0:23:66.21:0,66,965	0/0:28,0:28:84.28:0,84,1236	0/0:18,0:18:48.15:0,48,700	0/0:23,0:23:69.21:0,69,993	0/0:31,0:31:93.29:0,93,1356	0/0:28,0:26:78.26:0,78,1167	0/0:23,0:22:66.21:0,66,969	0/0:27,0:27:81.26:0,81,1194	0/0:33,0:33:96.23:0,96,1366	0/0:17,0:15:45.12:0,45,650	0/0:27,0:20:57.17:0,57,832	0/0:31,0:31:93.28:0,93,1327	0/0:16,0:16:48.15:0,48,697	0/0:22,0:22:66.19:0,66,945	0/0:25,0:25:75.24:0,75,1099	0/0:12,0:12:36.12:0,36,539	0/0:18,0:18:54.18:0,54,809	0/0:23,0:22:63.20:0,63,923	0/0:23,0:22:66.18:0,66,925	0/0:13,0:12:33.11:0,33,494
chr10	97866152	.	C	CA	848.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.329;DP=624;FS=0.000;HRun=4;HaplotypeScore=57.6840;InbreedingCoeff=0.9745;MQ=56.76;MQ0=7;MQRankSum=-0.710;QD=30.29;ReadPosRankSum=1.335;VQSLOD=3.6174;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:69.23:943,69,0	0/0:10,0:10:30.09:0,30,340	0/0:15,0:6:17.41:0,17,177	0/0:15,0:6:15.04:0,15,169	0/0:27,0:27:78.21:0,78,874	0/0:28,0:28:81.19:0,81,892	0/0:23,0:23:60.17:0,60,680	0/0:31,0:28:78.17:0,78,854	0/0:32,0:32:96.24:0,96,1069	0/0:26,0:26:75.17:0,75,811	0/0:17,0:17:51.11:0,51,559	0/0:13,0:13:39.11:0,39,442	0/0:13,0:13:30.08:0,30,340	0/0:20,0:20:57.16:0,57,646	0/0:16,0:16:48.14:0,48,544	0/0:19,0:19:57.15:0,57,637	0/0:34,0:32:84.22:0,84,942	0/0:19,0:19:51.12:0,51,567	0/0:21,0:16:42.10:0,42,467	0/0:34,0:34:99:0,99,1123	0/0:25,0:25:75.21:0,75,850	0/0:23,0:23:60.17:0,60,680	0/0:23,0:23:63.18:0,63,714	0/0:24,0:24:72.21:0,72,816	0/0:15,0:15:42.12:0,42,476	0/0:26,0:26:75.20:0,75,843	0/0:25,0:25:72.17:0,72,794	0/0:22,0:22:66.19:0,66,749
chr10	97866847	.	G	GTGAAAGATCTGTA	8004.75	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-3.918;DP=520;FS=2.649;HRun=0;HaplotypeScore=157.3547;InbreedingCoeff=0.9700;MQ=52.79;MQ0=14;MQRankSum=-8.948;QD=97.62;ReadPosRankSum=-0.848;VQSLOD=4.7911;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,5:10:15.02:810,15,0	0/0:11,0:11:33.11:0,33,1186	0/0:22,0:5:12.04:0,12,419	0/0:31,0:14:32.30:0,32,1210	0/0:21,0:20:48.16:0,48,1688	0/0:22,0:22:57.20:0,57,2219	0/0:15,0:15:42.14:0,42,1526	1/1:11,0:7:12.04:383,12,0	0/0:13,0:13:39.11:0,39,1355	0/0:18,0:18:51.18:0,51,1895	0/0:17,0:17:48.15:0,48,1740	0/0:8,0:8:21.07:0,21,833	0/0:24,0:24:69.24:0,69,2583	0/0:16,0:16:45.15:0,45,1651	0/0:14,0:14:39.13:0,39,1499	1/1:4,9:14:21.07:1381,21,0	0/0:29,0:28:58.31:0,58,2763	1/1:2,1:4:9.03:574,9,0	0/0:21,0:17:48.16:0,48,1519	0/0:29,0:29:78.27:0,78,2894	0/0:30,0:30:81.26:0,81,2898	0/0:22,0:22:63.19:0,63,2251	0/0:21,0:21:63.22:0,63,2347	0/0:17,0:17:42.12:0,42,1456	0/0:12,0:12:36.12:0,36,1379	1/1:7,8:25:62.95:3333,63,0	0/0:25,0:24:69.19:0,69,2423	1/1:3,7:16:24.08:1525,24,0
chr10	97867000	.	TC	T	3435.89	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.425;DP=527;FS=0.422;HRun=2;HaplotypeScore=53.5891;InbreedingCoeff=0.9967;MQ=65.60;MQ0=4;MQRankSum=-3.129;QD=33.69;ReadPosRankSum=-1.068;VQSLOD=3.0902;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:84.27:1084,84,0	0/0:8,0:8:24.08:0,24,358	0/0:20,0:15:35.45:0,35,569	0/0:13,0:9:24.02:0,24,279	0/0:32,0:32:96.31:0,96,1408	0/0:24,0:24:72.23:0,72,1052	0/0:15,0:15:45.14:0,45,651	1/1:1,32:30:84.18:1012,84,0	0/0:12,0:12:36.12:0,36,539	0/0:24,0:24:72.21:0,72,996	0/0:25,0:25:75.23:0,75,1085	0/0:6,0:6:18.06:0,18,268	0/0:20,0:20:60.19:0,60,878	0/0:12,0:12:36.11:0,36,517	0/0:15,0:15:42.12:0,42,591	0/0:16,0:16:41.95:0,42,607	0/0:25,0:25:75.22:0,75,1054	1/1:2,9:11:27.09:348,27,0	0/0:15,0:14:42.12:0,42,607	0/0:29,0:29:87.28:0,87,1281	0/0:19,0:19:57.18:0,57,832	0/0:19,0:19:51.11:0,51,679	0/0:22,0:22:66.22:0,66,986	0/0:18,0:18:48.63:0,49,718	0/0:13,0:13:36.11:0,36,519	1/1:0,16:16:48.14:603,48,0	0/0:23,0:23:66.22:0,66,987	1/1:0,10:10:30.10:389,30,0
chr10	97868520	.	C	CAT	1424.94	PASS	AB=0.811;AC=8;AF=0.143;AN=56;BaseQRankSum=-5.263;DP=521;FS=2.021;HRun=0;HaplotypeScore=70.4195;InbreedingCoeff=0.1902;MQ=59.73;MQ0=0;MQRankSum=-0.026;QD=14.84;ReadPosRankSum=-1.793;VQSLOD=2.7629;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:2.29:0,2,498	0/0:8,0:8:18.06:0,18,223	0/1:10,0:8:0.42:0,0,31	0/1:11,0:12:12.14:12,0,150	0/0:16,0:16:36.11:0,36,446	0/0:17,0:17:45.14:0,45,558	0/0:9,0:9:18.06:0,18,223	0/1:10,15:23:6.24:542,0,6	0/0:16,0:16:36.10:0,36,433	0/0:23,0:24:66.04:0,66,795	0/0:17,0:18:32.92:0,33,369	0/0:25,0:25:66.18:0,66,793	0/0:25,0:26:66.02:0,66,781	0/0:24,0:24:51.13:0,51,607	0/0:21,0:23:50.97:0,51,596	0/1:4,16:20:26.24:641,0,26	0/0:19,0:19:42.13:0,42,519	1/1:10,0:10:11.99:106,12,0	0/0:28,0:28:66.19:0,66,797	0/0:16,0:17:41.95:0,42,485	0/0:25,0:25:36.19:0,36,670	0/0:17,0:17:33.10:0,33,406	0/0:15,0:17:41.79:0,42,474	0/0:22,0:22:51.16:0,51,632	0/0:15,0:15:36.10:0,36,431	0/1:4,0:4:9.49:28,0,9	0/0:23,0:23:51.07:0,51,586	0/1:7,6:13:19.13:228,0,19
chr10	97869075	.	G	GT	3588.06	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-3.573;DP=484;FS=6.627;HRun=3;HaplotypeScore=49.2245;InbreedingCoeff=0.9947;MQ=84.95;MQ0=0;MQRankSum=-1.903;QD=36.24;ReadPosRankSum=0.912;VQSLOD=4.0154;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:60.20:840,60,0	0/0:6,0:6:15.03:0,15,168	0/0:22,0:22:60.18:0,60,709	0/0:12,0:12:33.10:0,33,387	0/0:17,0:17:48.12:0,48,553	0/0:17,0:17:45.14:0,45,540	0/0:13,0:13:36.11:0,36,432	1/1:0,26:27:81.27:1122,81,0	0/0:13,0:13:33.10:0,33,396	0/0:21,0:21:57.16:0,57,674	0/0:19,0:19:45.09:0,45,514	0/0:20,0:20:60.18:0,60,719	0/0:14,0:14:39.12:0,39,468	0/0:11,0:11:33.10:0,33,396	0/0:17,0:17:51.16:0,51,611	0/0:14,0:14:42.13:0,42,504	0/0:16,0:16:45.14:0,45,538	1/1:1,7:8:21.07:294,21,0	0/0:19,0:19:51.16:0,51,612	0/0:19,0:19:51.14:0,51,601	0/0:12,0:12:36.11:0,36,432	0/0:16,0:16:42.12:0,42,494	0/0:19,0:19:48.14:0,48,576	0/0:10,0:10:30.09:0,30,360	0/0:19,0:19:54.14:0,54,635	1/1:3,24:27:39.24:955,39,0	0/0:39,0:39:99:0,114,1366	1/1:2,9:11:27.09:377,27,0
chr10	97869457	.	A	AT	604.87	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.711;DP=519;FS=1.727;HRun=8;HaplotypeScore=51.9056;InbreedingCoeff=0.9295;MQ=75.52;MQ0=0;MQRankSum=0.713;QD=20.86;ReadPosRankSum=2.520;VQSLOD=3.6653;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:29:38.73:700,39,0	0/0:16,0:16:45.01:0,45,407	0/0:14,0:15:14.61:0,15,206	0/0:8,0:8:18.01:0,18,165	0/0:21,0:21:60.02:0,60,545	0/0:23,0:23:63.03:0,63,577	0/0:4,0:4:12.01:0,12,110	0/0:30,0:30:72.01:0,72,651	0/0:19,0:19:50.98:0,51,453	0/0:25,0:25:63.01:0,63,572	0/0:20,0:20:38.98:0,39,357	0/0:21,0:21:57.02:0,57,517	0/0:16,0:16:45.02:0,45,412	0/0:14,0:14:39.02:0,39,357	0/0:30,0:30:90.05:0,90,824	0/0:20,0:20:60.03:0,60,549	0/0:24,0:24:62.97:0,63,560	0/0:15,0:15:38.99:0,39,351	0/0:26,0:26:72.02:0,72,655	0/0:24,0:24:60.02:0,60,549	0/0:11,0:11:33.02:0,33,302	0/0:9,0:9:24.01:0,24,218	0/0:12,0:12:29.98:0,30,269	0/0:5,0:5:15.01:0,15,137	0/0:25,0:25:72:0,72,649	0/0:20,0:20:57.03:0,57,519	0/0:25,0:25:69.04:0,69,632	0/0:12,0:12:33.02:0,33,302
chr10	97872813	.	TC	T	2422.38	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.674;DP=672;FS=0.469;HRun=2;HaplotypeScore=62.2859;InbreedingCoeff=0.9968;MQ=87.26;MQ0=0;MQRankSum=-1.172;QD=35.62;ReadPosRankSum=-1.370;VQSLOD=3.4257;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1687	0/0:6,0:6:18.06:0,18,270	0/0:24,0:24:63.20:0,63,899	0/0:23,0:23:66.12:0,66,956	0/0:36,0:36:99:0,108,1572	0/0:17,0:17:51.17:0,51,763	0/0:19,0:19:54.18:0,54,804	1/1:0,27:27:81.24:1024,81,0	0/0:25,0:25:75.24:0,75,1104	0/0:26,0:26:75.25:0,75,1124	0/0:21,0:21:60.19:0,60,879	0/0:25,0:25:69.23:0,69,1034	0/0:24,0:24:72.22:0,72,1039	0/0:12,0:12:33.11:0,33,494	0/0:27,0:27:81.25:0,81,1174	0/0:20,0:20:60.20:0,60,898	0/0:44,0:44:99:0,132,1953	1/1:1,8:9:24.08:312,24,0	0/0:19,0:19:54.18:0,54,806	0/0:39,0:39:99:0,117,1754	0/0:31,0:31:93.30:0,93,1366	0/0:27,0:27:81.27:0,81,1214	0/0:32,0:32:96.32:0,96,1433	0/0:23,0:23:69.22:0,69,1015	0/0:20,0:20:57.19:0,57,852	1/1:0,23:23:69.22:896,69,0	0/0:26,0:26:78.25:0,78,1148	1/1:0,9:9:27.09:351,27,0
chr10	97874345	.	CATAATAAA	C	3807.01	PASS	AB=0.563;AC=7;AF=0.125;AN=56;BaseQRankSum=8.890;DP=409;FS=4.471;HRun=0;HaplotypeScore=103.2574;InbreedingCoeff=0.8119;MQ=72.56;MQ0=0;MQRankSum=-8.501;QD=59.48;ReadPosRankSum=-0.859;VQSLOD=3.3804;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:36.12:0,36,1485	0/0:7,0:7:12.04:0,12,522	0/0:7,0:7:12:0,12,311	0/0:13,0:12:29.89:0,30,1086	0/0:23,0:23:63.22:0,63,2740	0/0:12,0:12:36.12:0,36,1482	0/0:8,0:8:24.08:0,24,1044	1/1:10,17:27:51.16:1279,51,0	0/0:15,0:15:39.13:0,39,1697	0/0:17,0:17:48.16:0,48,1904	0/0:26,0:26:66.23:0,66,2624	0/0:13,0:13:33.11:0,33,1339	0/0:18,0:18:51.18:0,51,2174	0/0:16,0:16:48.16:0,48,2063	0/0:9,0:9:27.09:0,27,1176	0/0:10,0:10:24.08:0,24,1019	0/0:17,0:17:48.16:0,48,1844	1/1:5,5:10:21.07:574,21,0	0/0:11,0:11:30.10:0,30,1241	0/0:19,0:19:48.16:0,48,2029	0/0:11,0:11:30.10:0,30,1222	0/0:5,0:5:15.05:0,15,572	0/0:19,0:19:54.19:0,54,2295	0/0:9,0:9:27.09:0,27,1116	0/0:21,0:20:60.21:0,60,2514	0/1:4,14:18:79.47:1211,0,79	0/0:26,0:26:75.26:0,75,3218	1/1:0,9:9:27.09:742,27,0
chr10	97874427	.	T	TTGA	6778.06	PASS	AB=0.542;AC=11;AF=0.196;AN=56;BaseQRankSum=-10.714;DP=514;FS=6.688;HRun=0;HaplotypeScore=68.7737;InbreedingCoeff=0.8793;MQ=78.06;MQ0=0;MQRankSum=-3.405;QD=59.46;ReadPosRankSum=-0.716;VQSLOD=6.1198;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:66.23:1524,66,0	0/0:11,0:11:33.11:0,33,582	0/0:13,0:13:36.02:0,36,490	0/0:10,0:10:26.40:0,26,391	0/0:38,0:38:99:0,111,1902	0/0:19,0:19:57.18:0,57,977	0/0:17,0:17:48.12:0,48,751	1/1:2,19:23:66.14:1316,66,0	0/0:20,0:20:60.19:0,60,1029	0/0:24,0:24:72.23:0,72,1217	0/0:26,0:26:78.24:0,78,1311	0/0:19,0:19:57.19:0,57,975	0/0:17,0:17:51.17:0,51,889	0/0:23,0:23:69.21:0,69,1155	0/0:16,0:16:45.13:0,45,739	1/1:0,18:18:51.18:1189,51,0	0/0:20,0:20:57.17:0,57,945	1/1:1,14:15:39.13:905,39,0	0/0:15,0:15:45.15:0,45,752	0/0:24,0:24:66.21:0,66,1120	0/0:4,0:4:12.04:0,12,212	0/0:14,0:14:42.12:0,42,685	0/0:20,0:20:60.18:0,60,992	0/0:7,0:7:21.03:0,21,337	0/0:21,0:21:63.22:0,63,1111	0/1:4,21:26:27.70:1313,0,28	0/0:22,0:22:66.18:0,66,1071	1/1:0,8:8:24.08:532,24,0
chr10	97875153	.	TG	T	878.66	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.987;DP=550;FS=0.000;HRun=2;HaplotypeScore=50.4676;InbreedingCoeff=0.9988;MQ=90.17;MQ0=0;MQRankSum=-4.059;QD=31.38;ReadPosRankSum=1.692;VQSLOD=3.1396;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:75.24:974,75,0	0/0:13,0:13:39.13:0,39,585	0/0:27,0:27:77.29:0,77,1130	0/0:16,0:16:39.10:0,39,541	0/0:42,0:42:99:0,126,1836	0/0:19,0:19:57.19:0,57,854	0/0:14,0:14:42.14:0,42,624	0/0:24,0:24:72.24:0,72,1079	0/0:15,0:15:45.13:0,45,648	0/0:21,0:21:63.20:0,63,908	0/0:19,0:19:51.17:0,51,764	0/0:15,0:15:45.15:0,45,674	0/0:19,0:19:57.18:0,57,832	0/0:21,0:21:63.21:0,63,924	0/0:22,0:22:63.18:0,63,886	0/0:19,0:19:57.19:0,57,854	0/0:18,0:18:54.18:0,54,798	0/0:13,0:13:39.13:0,39,584	0/0:12,0:12:33.11:0,33,490	0/0:18,0:18:54.17:0,54,790	0/0:13,0:13:36.12:0,36,540	0/0:27,0:27:81.27:0,81,1207	0/0:17,0:17:48.16:0,48,719	0/0:17,0:17:51.16:0,51,742	0/0:30,0:30:90.28:0,90,1322	0/0:22,0:21:66.22:0,66,989	0/0:19,0:19:57.19:0,57,854	0/0:10,0:10:30.10:0,30,447
chr10	97876040	.	TACC	T	468.18	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.914;DP=624;FS=6.651;HRun=0;HaplotypeScore=82.7074;InbreedingCoeff=0.9732;MQ=57.80;MQ0=12;MQRankSum=-0.342;QD=27.54;ReadPosRankSum=1.859;VQSLOD=3.5124;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:66.14:0,66,1423	0/0:9,0:9:27.09:0,27,623	0/0:16,0:6:18.06:0,18,414	0/0:16,0:9:23.95:0,24,498	0/0:23,0:23:63.22:0,63,1452	0/0:27,0:27:81.28:0,81,1868	0/0:16,0:16:33.08:0,33,760	0/0:32,0:26:75.21:0,75,1678	0/0:29,0:29:87.30:0,87,2002	0/0:17,0:17:48.16:0,48,1083	0/0:19,0:19:57.20:0,57,1313	0/0:12,0:12:36.12:0,36,830	0/0:30,0:30:90.31:0,90,2041	0/0:27,0:27:75.25:0,75,1648	0/0:19,0:19:57.20:0,57,1289	0/0:26,0:26:78.27:0,78,1799	0/0:32,0:32:87.30:0,87,1965	1/1:3,14:16:33.11:563,33,0	0/0:23,0:19:54.19:0,54,1246	0/0:25,0:25:69.24:0,69,1588	0/0:32,0:32:93.32:0,93,2093	0/0:28,0:28:78.27:0,78,1797	0/0:13,0:13:39.13:0,39,899	0/0:19,0:19:57.20:0,57,1315	0/0:18,0:18:54.19:0,54,1246	0/0:28,0:28:81.27:0,81,1809	0/0:40,0:40:99:0,117,2663	0/0:5,0:5:15.05:0,15,346
chr10	97876378	.	CTG	C	1715.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.741;DP=634;FS=2.031;HRun=0;HaplotypeScore=77.5961;InbreedingCoeff=0.9918;MQ=83.94;MQ0=0;MQRankSum=-4.163;QD=38.11;ReadPosRankSum=1.915;VQSLOD=5.6671;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,44:45:99:1810,123,0	0/0:7,0:7:21.07:0,21,393	0/0:21,0:21:60.19:0,60,1089	0/0:20,0:20:46.57:0,47,831	0/0:33,0:33:93.27:0,93,1635	0/0:17,0:17:51.17:0,51,955	0/0:17,0:17:51.17:0,51,955	0/0:33,0:33:90.28:0,90,1592	0/0:20,0:20:60.19:0,60,1085	0/0:34,0:34:99:0,102,1884	0/0:23,0:23:66.22:0,66,1213	0/0:19,0:19:57.20:0,57,1067	0/0:26,0:26:69.24:0,69,1283	0/0:13,0:13:36.11:0,36,643	0/0:29,0:29:87.30:0,87,1622	0/0:25,0:25:75.24:0,75,1365	0/0:19,0:19:51.17:0,51,955	0/0:16,0:16:48.16:0,48,881	0/0:19,0:19:57.19:0,57,1017	0/0:37,0:37:99:0,108,2016	0/0:22,0:22:63.22:0,63,1178	0/0:33,0:33:99:0,99,1846	0/0:14,0:14:42.13:0,42,754	0/0:21,0:21:63.19:0,63,1146	0/0:22,0:22:57.14:0,57,970	0/0:21,0:21:57.17:0,57,1006	0/0:20,0:20:60.21:0,60,1122	0/0:8,0:8:21.07:0,21,393
chr10	97877607	.	GT	G	624.86	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.155;DP=712;FS=3.039;HRun=4;HaplotypeScore=67.8821;InbreedingCoeff=0.9954;MQ=80.71;MQ0=0;MQRankSum=-0.727;QD=27.17;ReadPosRankSum=1.529;VQSLOD=2.8679;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,1938	0/0:7,0:7:21.06:0,21,276	0/0:16,0:16:42.13:0,42,567	0/0:23,0:23:66.01:0,66,825	0/0:31,0:31:90.29:0,90,1243	0/0:23,0:23:66.21:0,66,901	0/0:27,0:27:69.22:0,69,947	0/0:27,0:27:72.22:0,72,970	0/0:33,0:33:93.29:0,93,1269	0/0:33,0:33:96.31:0,96,1323	0/0:21,0:21:57.19:0,57,795	0/0:31,0:31:90.27:0,90,1226	0/0:30,0:30:84.28:0,84,1176	0/0:29,0:29:81.27:0,81,1126	0/0:21,0:21:60.20:0,60,834	1/1:0,23:23:60.18:720,60,0	0/0:28,0:28:84.24:0,84,1147	0/0:21,0:21:63.21:0,63,875	0/0:23,0:23:60.19:0,60,813	0/0:26,0:26:72.23:0,72,984	0/0:24,0:24:63.21:0,63,883	0/0:23,0:23:69.23:0,69,960	0/0:27,0:27:78.25:0,78,1074	0/0:29,0:29:81.25:0,81,1112	0/0:28,0:28:84.26:0,84,1154	0/0:22,0:22:66.21:0,66,907	0/0:28,0:28:84.28:0,84,1176	0/0:10,0:10:30.10:0,30,420
chr10	97879535	.	G	GCCCT	668.49	PASS	AB=0.861;AC=3;AF=0.054;AN=56;BaseQRankSum=5.104;DP=415;FS=0.000;HRun=0;HaplotypeScore=73.1413;InbreedingCoeff=-0.0518;MQ=72.89;MQ0=0;MQRankSum=-3.382;QD=11.73;ReadPosRankSum=-1.783;VQSLOD=2.6029;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:39.13:0,39,638	0/0:4,0:4:6.01:0,6,75	0/1:14,0:13:5.45:5,0,189	0/1:29,0:29:46.94:47,0,630	0/0:12,0:12:27.09:0,27,449	0/0:15,0:15:30.10:0,30,504	0/0:25,0:25:60.20:0,60,1001	0/0:12,0:12:6.02:0,6,101	0/0:17,0:17:36.12:0,36,591	0/0:18,0:18:48.16:0,48,804	0/0:8,0:8:18.06:0,18,302	0/0:20,0:20:33.11:0,33,554	0/0:13,0:13:30.10:0,30,504	0/0:14,0:14:36.12:0,36,605	0/0:19,0:19:42.14:0,42,702	0/0:16,0:16:36.06:0,36,604	0/0:13,0:13:27.09:0,27,453	0/0:8,0:8:18.05:0,18,278	0/0:18,0:18:45.14:0,45,724	0/0:6,0:6:18.06:0,18,302	0/0:38,0:38:81.28:0,81,1360	0/0:6,0:6:15.05:0,15,252	0/0:10,0:10:30.10:0,30,498	0/0:15,0:15:36.12:0,36,596	0/0:5,0:5:12.04:0,12,202	0/1:4,10:14:17.28:709,0,17	0/0:14,0:14:30.10:0,30,504	0/0:11,0:11:30.10:0,30,497
chr10	97879572	.	TC	T	316.71	PASS	AB=0.538;AC=1;AF=0.018;AN=56;BaseQRankSum=4.679;DP=412;FS=3.784;HRun=4;HaplotypeScore=60.9201;InbreedingCoeff=0.3549;MQ=90.06;MQ0=2;MQRankSum=-2.861;QD=22.62;ReadPosRankSum=-0.807;VQSLOD=2.5903;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:51.17:0,51,712	0/0:1,0:1:3.01:0,3,42	0/0:24,0:25:58.61:0,59,791	0/0:41,0:38:71.77:0,72,1148	0/0:13,0:13:39.12:0,39,528	0/0:14,0:14:42.14:0,42,588	0/0:30,0:29:78.23:0,78,1057	0/0:11,0:11:30.09:0,30,405	0/0:14,0:14:42.14:0,42,581	0/0:14,0:14:39.12:0,39,530	0/0:5,0:5:15.05:0,15,210	0/0:13,0:13:39.13:0,39,541	0/0:12,0:12:36.12:0,36,504	0/0:12,0:12:36.12:0,36,504	0/0:14,0:14:42.12:0,42,556	0/0:13,0:13:39.09:0,39,524	0/0:15,0:15:39.13:0,39,545	0/0:10,0:10:24.02:0,24,297	0/0:16,0:16:42.14:0,42,588	0/0:6,0:6:18.06:0,18,252	0/0:37,0:37:87.29:0,87,1212	0/0:7,0:7:21.07:0,21,294	0/0:10,0:10:30.09:0,30,404	0/0:20,0:20:42.14:0,42,581	0/0:6,0:6:18.06:0,18,252	0/1:2,12:14:2.89:391,0,3	0/0:12,0:12:36.12:0,36,502	0/0:4,0:4:12.04:0,12,167
chr10	97879652	.	CTCTT	C	328.25	PASS	AB=1.000;AC=16;AF=0.308;AN=52;BaseQRankSum=0.480;DP=434;FS=25.282;HRun=0;HaplotypeScore=119.5878;InbreedingCoeff=-0.2839;MQ=47.34;MQ0=25;MQRankSum=1.321;QD=1.33;ReadPosRankSum=3.155;VQSLOD=0.2469;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:27:1.74:0,2,100	0/1:3,0:3:0.91:1,0,58	./.	./.	0/1:14,0:14:21.56:22,0,112	0/1:14,0:14:21.57:22,0,87	0/1:25,0:25:47.24:47,0,218	0/1:14,0:11:1.29:1,0,39	0/0:13,0:13:6.05:0,6,82	0/1:20,0:18:52.21:52,0,307	0/1:11,0:11:23.67:24,0,98	0/1:20,0:20:89.47:89,0,134	0/1:11,0:11:23.43:23,0,101	0/0:15,0:15:32.97:0,33,325	0/0:10,0:10:15.94:0,16,149	0/0:17,0:16:29.65:0,30,162	0/0:22,0:21:35.45:0,35,295	0/0:7,7:11:1.47:0,1,52	0/1:11,0:10:15.98:16,0,150	0/0:10,0:9:8.80:0,9,62	0/1:43,0:38:13.13:13,0,323	0/1:9,0:9:0.97:1,0,62	0/0:10,6:14:11.52:0,12,60	0/1:27,0:27:39.52:40,0,212	0/0:8,0:8:20:0,20,214	0/1:19,0:18:83.24:83,0,162	0/0:24,0:22:27.42:0,27,482	1/1:4,1:3:5.87:35,6,0
chr10	97879669	.	TCA	T	272.56	PASS	AB=0.995;AC=9;AF=0.167;AN=54;BaseQRankSum=4.766;DP=472;FS=2.837;HRun=0;HaplotypeScore=105.9653;InbreedingCoeff=0.2263;MQ=48.47;MQ0=29;MQRankSum=2.256;QD=2.25;ReadPosRankSum=0.440;VQSLOD=1.7215;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,1:32:21.83:22,0,65	1/1:3,0:3:2.68:11,3,0	0/0:5,0:2:5.83:0,6,33	./.	0/0:13,0:13:3.64:0,4,293	0/0:12,0:11:20.38:0,20,271	0/0:31,0:31:59.71:0,60,759	0/0:17,0:12:15.67:0,16,178	0/0:12,0:12:20.94:0,21,282	0/0:25,0:24:50.62:0,51,619	0/1:16,0:16:0.65:1,0,339	0/0:22,0:21:32.93:0,33,456	0/0:14,0:14:34.60:0,35,486	0/1:13,0:13:12.99:13,0,283	0/0:11,0:11:21.88:0,22,260	1/1:12,6:17:27.06:299,27,0	0/0:20,0:20:35.55:0,36,464	0/1:16,0:13:40.55:41,0,56	0/1:16,0:14:19.76:20,0,172	0/0:13,0:11:12.01:0,12,135	0/0:41,0:36:30.66:0,31,676	0/0:8,0:8:12.04:0,12,190	0/0:16,0:14:11.85:0,12,134	0/0:27,0:27:38.87:0,39,484	0/0:7,0:7:11.50:0,11,107	0/0:25,0:22:49.88:0,50,556	0/0:22,0:20:21.23:0,21,472	0/0:3,0:3:5.60:0,6,38
chr10	97879691	.	T	TCA	523.57	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.546;DP=506;FS=3.252;HRun=0;HaplotypeScore=100.7446;InbreedingCoeff=0.7915;MQ=51.78;MQ0=19;MQRankSum=-2.593;QD=22.76;ReadPosRankSum=-3.973;VQSLOD=2.8121;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:33:10.34:0,10,57	0/0:2,0:2:0:0,0,0	0/0:10,0:5:13.72:0,14,103	0/0:19,0:3:5.69:0,6,47	0/0:14,0:14:33.10:0,33,400	0/0:16,0:15:35.70:0,36,408	0/0:40,0:40:98.56:0,99,1147	1/1:8,12:18:39.11:550,39,0	0/0:12,0:12:17.64:0,18,215	0/0:22,0:22:47.15:0,47,526	0/0:20,0:20:53.78:0,54,619	0/0:20,0:19:44.94:0,45,494	0/0:15,0:15:39.12:0,39,472	0/0:13,0:13:33.08:0,33,382	0/0:10,0:11:29.83:0,30,356	0/0:7,0:17:20.06:0,20,122	0/0:24,0:24:41.69:0,42,486	0/0:12,0:11:17.31:0,17,107	0/0:18,0:18:38.90:0,39,413	0/0:15,0:14:24.07:0,24,289	0/0:45,0:43:82.58:0,83,961	0/0:8,0:8:12.04:0,12,146	0/0:18,0:17:11.57:0,12,224	0/0:25,0:25:48.14:0,48,578	0/0:9,0:9:23.74:0,24,266	0/0:21,0:18:44.86:0,45,498	0/0:18,0:16:32.89:0,33,375	1/1:1,2:3:7.26:85,7,0
chr10	97879703	.	ACACACT	A	116.02	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=2.542;DP=514;FS=1.882;HRun=0;HaplotypeScore=130.1660;InbreedingCoeff=0.7278;MQ=56.29;MQ0=15;MQRankSum=-0.338;QD=3.22;ReadPosRankSum=-0.161;VQSLOD=2.3237;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,26:32:8.83:199,9,0	./.	0/0:12,0:6:15.04:0,15,346	0/0:19,0:6:2.55:0,3,126	0/0:14,0:14:39.12:0,39,1146	0/0:15,0:14:39.13:0,39,1041	0/0:42,0:42:99:0,111,3078	0/0:25,0:23:54.15:0,54,819	0/0:12,0:12:18.06:0,18,555	0/0:25,0:25:60.19:0,60,1460	0/0:25,0:25:65.63:0,66,1746	0/0:21,0:20:48.01:0,48,1410	0/0:13,0:13:39.13:0,39,1214	0/0:11,0:11:33.10:0,33,929	0/0:12,0:12:33.10:0,33,935	0/0:18,0:17:36.09:0,36,402	0/0:24,0:24:45.14:0,45,1271	0/0:14,0:13:32.10:0,32,603	0/0:15,0:15:36.10:0,36,873	0/0:12,0:12:29.92:0,30,745	0/0:46,0:44:95.91:0,96,2451	0/0:7,0:7:15.05:0,15,392	0/0:17,0:16:30.04:0,30,650	0/0:23,0:23:54.17:0,54,1617	0/0:9,0:9:27.09:0,27,699	0/0:25,0:22:58.86:0,59,1290	0/0:17,0:16:39.12:0,39,1107	0/0:4,0:4:11.50:0,11,157
chr10	97882587	.	AACAGGGC	A	1957.60	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.798;DP=665;FS=1.561;HRun=0;HaplotypeScore=154.0616;InbreedingCoeff=0.9956;MQ=62.84;MQ0=0;MQRankSum=-8.468;QD=69.91;ReadPosRankSum=0.612;VQSLOD=3.5260;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:51:99:0,154,5951	0/0:7,0:7:21.06:0,21,742	0/0:25,0:25:69.24:0,69,2630	0/0:36,0:35:90.31:0,90,3100	0/0:27,0:27:75.26:0,75,2941	0/0:17,0:17:48.16:0,48,1938	0/0:18,0:18:48.16:0,48,1789	0/0:26,0:26:78.27:0,78,3123	0/0:26,0:26:75.24:0,75,2862	0/0:28,0:28:81.26:0,81,2983	0/0:22,0:22:66.23:0,66,2595	0/0:14,0:14:42.14:0,42,1462	0/0:13,0:13:39.13:0,39,1457	0/0:21,0:21:60.21:0,60,2401	0/0:24,0:24:72.25:0,72,2874	0/0:25,0:25:72.21:0,72,2696	0/0:30,0:30:73.89:0,74,3091	0/0:22,0:21:54.18:0,54,2094	0/0:21,0:21:60.21:0,60,2205	0/0:22,0:22:63.22:0,63,2481	0/0:50,0:50:99:0,144,5789	0/0:19,0:19:57.20:0,57,2277	0/0:21,0:21:63.22:0,63,2482	0/0:22,0:22:66.21:0,66,2516	0/0:15,0:15:42.14:0,42,1615	1/1:2,26:28:78.27:2052,78,0	0/0:23,0:22:69.24:0,69,2732	0/0:11,0:11:33.11:0,33,1284
chr10	97883786	.	C	CT	1195.96	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=12.512;DP=584;FS=0.858;HRun=10;HaplotypeScore=76.8550;InbreedingCoeff=0.8176;MQ=63.69;MQ0=4;MQRankSum=-5.166;QD=7.72;ReadPosRankSum=1.355;VQSLOD=2.0536;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:40:80.41:366,80,0	0/0:10,0:10:20.97:0,21,172	0/1:18,0:15:8.84:9,0,121	0/0:12,0:12:5.49:0,5,85	0/0:27,0:26:59.92:0,60,492	0/0:18,0:18:44.94:0,45,369	0/0:11,1:12:3.16:0,3,195	1/1:27,0:27:47.63:218,48,0	0/0:18,0:18:50.93:0,51,418	0/0:34,0:33:74.89:0,75,613	0/0:26,0:29:60.96:0,61,479	0/0:13,0:13:32.95:0,33,271	0/0:11,0:11:20.93:0,21,172	0/0:13,0:13:2.68:0,3,216	0/0:17,0:17:38.90:0,39,315	1/1:2,12:14:33.08:352,33,0	0/0:33,0:33:77.05:0,77,622	1/1:13,0:13:19.93:97,20,0	0/0:20,1:20:21.08:0,21,274	0/0:40,0:41:99:0,100,793	0/0:9,0:9:26.96:0,27,221	0/0:13,0:13:26.96:0,27,221	0/0:21,0:21:50.93:0,51,418	0/0:25,0:25:71.75:0,72,591	0/0:22,0:22:56.90:0,57,468	1/1:32,0:31:57.70:288,58,0	0/0:27,0:27:68.76:0,69,546	1/1:10,0:10:11.19:51,11,0
chr10	97883787	.	T	TTTTC	6544.03	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.642;DP=592;FS=0.407;HRun=0;HaplotypeScore=95.8208;InbreedingCoeff=0.9856;MQ=61.57;MQ0=5;MQRankSum=-7.766;QD=48.84;ReadPosRankSum=0.848;VQSLOD=5.6482;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,38:42:76.29:2015,76,0	0/0:10,0:10:24.07:0,24,424	0/0:18,0:14:35.64:0,36,478	0/0:12,0:11:13.17:0,13,255	0/0:28,0:27:69.21:0,69,1164	0/0:18,0:18:51.16:0,51,878	0/0:13,0:12:33.09:0,33,556	1/1:5,26:31:84.12:1678,84,0	0/0:17,0:17:51.17:0,51,930	0/0:33,0:32:81.27:0,81,1446	0/0:28,0:28:78.19:0,78,1261	0/0:13,0:13:36.11:0,36,639	0/0:11,0:11:33.08:0,33,475	0/0:13,0:13:34.92:0,35,595	0/0:17,0:17:45.14:0,45,770	0/0:13,0:13:32.49:0,32,208	0/0:33,0:33:83.35:0,83,1461	1/1:2,15:17:24.07:597,24,0	0/0:21,0:20:44.80:0,45,695	0/0:42,0:41:99:0,108,1778	0/0:10,0:9:27.09:0,27,479	0/0:13,0:13:30.09:0,30,534	0/0:21,0:21:54.17:0,54,935	0/0:25,0:25:72.24:0,72,1318	0/0:22,0:22:66.17:0,66,1143	1/1:4,29:33:89.95:1956,90,0	0/0:27,0:27:75.05:0,75,1192	1/1:0,10:10:12.04:299,12,0
chr10	97883983	.	GTTTT	G	1191.38	PASS	AB=0.652;AC=7;AF=0.130;AN=54;BaseQRankSum=3.317;DP=428;FS=5.461;HRun=17;HaplotypeScore=80.0422;InbreedingCoeff=0.7305;MQ=68.86;MQ0=23;MQRankSum=-1.721;QD=14.53;ReadPosRankSum=3.881;VQSLOD=0.4582;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,21:30:52.02:622,52,0	0/0:5,0:6:12.04:0,12,226	0/0:24,0:14:17.88:0,18,222	0/0:12,0:8:12.03:0,12,165	0/0:19,0:20:45.15:0,45,860	0/0:10,0:11:24.08:0,24,490	0/0:11,0:11:27.09:0,27,517	1/1:9,10:20:35.79:426,36,0	0/0:13,0:15:33.11:0,33,608	0/0:21,0:22:47.15:0,47,885	0/0:10,0:10:21.07:0,21,426	0/0:6,0:8:21.07:0,21,390	0/0:11,0:15:35.88:0,36,642	0/0:12,0:11:24.08:0,24,464	0/0:7,0:7:9.03:0,9,154	1/1:5,7:11:17.94:226,18,0	0/0:20,0:22:54.15:0,54,961	0/0:4,0:13:0.44:0,0,125	0/0:15,0:12:25.58:0,26,376	0/0:21,0:22:48.16:0,48,897	0/0:10,0:12:30.10:0,30,596	0/0:4,0:8:18.06:0,18,297	0/0:17,0:16:32.32:0,32,532	0/0:9,0:12:21.07:0,21,382	0/0:12,0:12:30.09:0,30,582	0/1:7,1:15:63.24:63,0,74	0/0:18,0:26:66.21:0,66,1271	./.
chr10	97884998	.	TAAGG	T	1839.53	PASS	AB=0.586;AC=6;AF=0.107;AN=56;BaseQRankSum=8.774;DP=613;FS=3.956;HRun=0;HaplotypeScore=85.6667;InbreedingCoeff=0.2315;MQ=54.19;MQ0=30;MQRankSum=-3.488;QD=22.16;ReadPosRankSum=1.371;VQSLOD=3.4173;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:4,24:27:99:568,0,117	0/0:9,0:9:27.09:0,27,685	0/0:23,0:4:12.04:0,12,299	0/0:29,0:2:6.02:0,6,144	0/0:26,0:26:75.26:0,75,1980	0/0:22,0:22:66.22:0,66,1652	0/0:16,0:16:42.14:0,42,1108	1/1:2,10:11:21.07:382,21,0	0/0:25,0:25:72.25:0,72,1895	0/0:26,0:26:69.24:0,69,1823	0/0:26,0:26:69.24:0,69,1822	0/0:24,0:24:60.21:0,60,1560	0/0:23,0:23:69.24:0,69,1788	0/0:16,0:16:45.15:0,45,1148	0/0:31,0:31:90.30:0,90,2325	0/0:21,0:21:54.19:0,54,1368	0/0:17,0:17:51.18:0,51,1346	0/1:5,8:12:42.77:203,0,43	0/0:21,0:12:33.11:0,33,872	0/0:29,0:29:84.29:0,84,2201	0/0:22,0:22:66.23:0,66,1649	0/0:29,0:29:69.24:0,69,1822	0/0:32,0:32:93.32:0,93,2426	0/0:14,0:14:42.14:0,42,1106	0/0:22,0:22:63.22:0,63,1663	0/1:4,13:16:99:617,0,192	0/0:27,0:27:75.24:0,75,1923	0/1:5,8:12:99:200,0,154
chr10	97885338	.	T	TC	1537.50	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.678;DP=673;FS=2.137;HRun=1;HaplotypeScore=56.6359;InbreedingCoeff=0.8828;MQ=54.90;MQ0=23;MQRankSum=0.694;QD=38.44;ReadPosRankSum=0.709;VQSLOD=4.1256;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:75.24:0,75,973	0/0:12,0:12:33.06:0,33,409	0/0:6,0:1:3.01:0,3,39	0/0:13,0:3:7.56:0,8,64	0/0:30,0:30:84.17:0,84,1066	0/0:33,0:32:93.30:0,93,1206	0/0:24,0:24:66.20:0,66,839	0/0:32,0:19:45.15:0,45,583	0/0:28,0:26:69.21:0,69,895	0/0:37,0:35:99:0,105,1342	0/0:25,0:25:66.64:0,67,824	0/0:31,0:31:87.28:0,87,1128	0/0:19,0:19:57.14:0,57,717	0/0:17,0:17:45.10:0,45,564	0/0:28,0:26:69.22:0,69,894	0/0:19,0:17:45.15:0,45,583	0/0:24,0:24:69.21:0,69,881	1/1:1,17:18:49.05:715,49,0	0/0:23,0:14:42.14:0,42,545	0/0:21,0:21:60.15:0,60,759	0/0:30,0:30:90.24:0,90,1146	0/0:29,0:29:84.27:0,84,1085	0/0:37,0:37:99:0,105,1350	0/0:19,0:19:48.15:0,48,619	0/0:15,0:15:39.13:0,39,506	1/1:0,22:22:63.21:943,63,0	0/0:39,0:39:99:0,108,1382	0/0:12,0:12:36.12:0,36,467
chr10	97887008	.	C	CA	314.72	PASS	AB=0.880;AC=6;AF=0.107;AN=56;BaseQRankSum=-4.910;DP=458;FS=6.684;HRun=10;HaplotypeScore=47.0977;InbreedingCoeff=0.5448;MQ=58.93;MQ0=10;MQRankSum=1.122;QD=6.42;ReadPosRankSum=-0.782;VQSLOD=0.5642;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:62.91:0,63,515	0/0:6,0:6:11.98:0,12,99	0/0:10,0:4:11.73:0,12,74	0/0:7,0:5:11.65:0,12,87	0/0:21,0:21:47.91:0,48,393	0/0:18,0:18:44.69:0,45,356	0/1:14,3:16:5.06:5,0,170	0/0:23,0:19:53.91:0,54,439	0/0:10,0:9:26.96:0,27,221	0/0:24,0:22:53.84:0,54,436	0/0:17,0:17:47.94:0,48,392	0/0:15,0:14:35.95:0,36,295	0/1:8,1:10:8.69:9,0,129	0/0:18,0:18:47.93:0,48,394	0/0:13,0:13:38.96:0,39,320	0/0:11,0:11:23.94:0,24,195	0/0:18,0:17:35.95:0,36,295	1/1:5,8:13:27.06:281,27,0	0/0:18,0:18:44.92:0,45,366	0/0:21,0:18:38.92:0,39,320	0/0:13,0:13:26.84:0,27,210	0/0:13,0:13:26.97:0,27,222	0/0:16,0:15:15.01:0,15,225	0/0:20,0:19:47.83:0,48,383	0/0:29,0:29:65.80:0,66,530	1/1:3,6:9:2.20:137,2,0	0/0:31,0:31:77.12:0,77,622	0/0:8,0:8:20.01:0,20,154
chr10	97887419	.	TC	T	509.52	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=5.695;DP=591;FS=2.056;HRun=2;HaplotypeScore=56.0233;InbreedingCoeff=0.9810;MQ=53.22;MQ0=36;MQRankSum=0.868;QD=22.15;ReadPosRankSum=0.313;VQSLOD=3.4200;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:48.11:604,48,0	0/0:8,0:8:17.66:0,18,267	./.	./.	0/0:28,0:28:78.25:0,78,1147	0/0:25,0:24:66.21:0,66,967	0/0:15,0:13:17.99:0,18,268	0/0:36,0:23:66.22:0,66,986	0/0:19,0:19:51.17:0,51,762	0/0:36,0:35:99:0,105,1518	0/0:22,0:22:54.18:0,54,807	0/0:19,0:19:54.18:0,54,808	0/0:19,0:19:54.17:0,54,788	0/0:18,0:18:45.10:0,45,629	0/0:18,0:17:48.16:0,48,714	0/0:16,0:16:39.13:0,39,583	0/0:17,0:17:45.15:0,45,672	0/0:19,0:19:54.13:0,54,756	0/0:32,0:17:51.17:0,51,764	0/0:32,0:32:96.30:0,96,1397	0/0:17,0:17:51.15:0,51,742	0/0:19,0:19:54.18:0,54,809	0/0:21,0:21:60.18:0,60,859	0/0:22,1:23:24.60:0,25,834	0/0:19,0:19:57.19:0,57,845	0/0:25,0:25:75.24:0,75,1102	0/0:36,0:36:96.28:0,96,1368	0/0:10,0:10:30.10:0,30,450
chr10	97890605	.	AT	A	1238.28	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.835;DP=669;FS=2.237;HRun=1;HaplotypeScore=61.6450;InbreedingCoeff=0.9968;MQ=87.64;MQ0=0;MQRankSum=-1.659;QD=35.38;ReadPosRankSum=-2.964;VQSLOD=2.7088;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,2162	0/0:7,0:7:21.06:0,21,313	0/0:21,0:21:63.19:0,63,947	0/0:25,0:25:75.23:0,75,1133	0/0:28,0:28:84.26:0,84,1288	0/0:22,0:22:66.23:0,66,1052	0/0:27,0:27:81.20:0,81,1219	1/1:0,26:26:78.21:1024,78,0	0/0:34,0:34:99:0,102,1603	0/0:23,0:23:69.22:0,69,1081	0/0:17,0:17:51.17:0,51,815	0/0:29,0:29:87.27:0,87,1342	0/0:28,0:28:84.23:0,84,1267	0/0:26,0:26:78.25:0,78,1220	0/0:28,0:28:84.27:0,84,1318	0/0:23,0:23:69.20:0,69,1056	0/0:29,0:29:87.30:0,87,1390	0/0:21,0:21:63.17:0,63,976	0/0:21,0:21:63.21:0,63,1005	0/0:19,0:19:57.19:0,57,911	0/0:23,0:23:69.22:0,69,1079	0/0:17,0:17:51.15:0,51,770	0/0:23,0:23:69.22:0,69,1074	0/0:23,0:23:66.23:0,66,1054	0/0:14,0:14:42.10:0,42,621	0/0:29,0:29:84.28:0,84,1319	0/0:31,0:31:93.32:0,93,1485	1/1:0,9:9:24.08:335,24,0
chr10	97894979	.	A	AAG	927.05	PASS	AB=0.869;AC=7;AF=0.125;AN=56;BaseQRankSum=8.208;DP=695;FS=6.452;HRun=0;HaplotypeScore=100.2472;InbreedingCoeff=0.5418;MQ=65.96;MQ0=10;MQRankSum=-2.973;QD=5.72;ReadPosRankSum=-0.506;VQSLOD=2.5421;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:29:12.18:156,12,0	0/0:9,0:9:21.04:0,21,236	0/0:44,0:16:13.29:0,13,146	0/1:76,0:25:1.68:2,0,71	0/0:36,0:36:51.06:0,51,583	0/1:13,0:12:5.43:5,0,116	0/0:18,0:18:38.85:0,39,438	0/0:35,0:37:20.16:0,20,537	0/0:18,0:18:36.11:0,36,426	0/0:27,0:27:59.65:0,60,663	0/0:24,0:24:8.12:0,8,313	0/0:19,0:19:30.09:0,30,355	0/0:24,0:24:51.15:0,51,602	0/0:15,0:16:29.92:0,30,330	0/0:17,0:18:44.96:0,45,500	0/0:8,0:14:19.63:0,20,121	0/0:26,0:26:60.07:0,60,666	1/1:12,5:16:25.29:339,25,0	0/0:22,0:24:44.96:0,45,502	0/0:30,0:32:56.96:0,57,643	0/0:26,0:26:54.14:0,54,626	0/0:24,0:24:33.07:0,33,368	0/0:21,0:21:42.56:0,43,468	0/0:15,0:15:32.76:0,33,355	0/0:20,0:21:35.93:0,36,396	0/1:10,14:24:24.37:554,0,24	0/0:29,0:29:50.70:0,51,549	0/0:10,0:11:23.88:0,24,262
chr10	97895001	.	TTGAC	T	558.51	PASS	AB=0.806;AC=4;AF=0.071;AN=56;BaseQRankSum=6.029;DP=629;FS=3.190;HRun=0;HaplotypeScore=115.7453;InbreedingCoeff=0.5029;MQ=73.76;MQ0=10;MQRankSum=-1.210;QD=4.58;ReadPosRankSum=-0.009;VQSLOD=2.2844;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:23:27.03:328,27,0	0/0:9,0:9:21.07:0,21,502	0/0:42,0:24:26.73:0,27,526	0/1:79,0:38:2.36:2,0,673	0/0:19,0:19:27.09:0,27,652	0/0:10,0:9:27.09:0,27,649	0/0:21,0:21:51.18:0,51,1204	0/0:25,0:25:27.09:0,27,517	0/0:18,0:18:42.14:0,42,961	0/0:23,0:23:48.16:0,48,1041	0/0:15,0:15:21.05:0,21,460	0/0:13,0:13:30.10:0,30,687	0/0:21,0:21:51.18:0,51,1209	0/0:16,0:16:39.13:0,39,823	0/0:23,0:23:57.20:0,57,1341	0/1:7,12:19:44.41:335,0,44	0/0:25,0:25:48.15:0,48,1100	0/0:13,0:14:27.08:0,27,411	0/0:19,0:19:36.12:0,36,846	0/0:24,0:24:39.12:0,39,807	0/0:39,0:39:75.26:0,75,1763	0/0:11,0:11:12.04:0,12,291	0/0:20,0:20:39.13:0,39,890	0/0:17,0:17:39.13:0,39,910	0/0:23,0:23:54.17:0,54,1203	0/0:19,0:25:54.16:0,54,897	0/0:24,0:24:54.19:0,54,1258	0/0:10,0:10:21.07:0,21,480
chr10	97896580	.	CTGGATAGCTAATGGG	C	1203.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.374;DP=725;FS=0.000;HRun=0;HaplotypeScore=288.0141;InbreedingCoeff=0.9952;MQ=90.50;MQ0=1;MQRankSum=-5.380;QD=80.26;ReadPosRankSum=2.556;VQSLOD=2.9767;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,102,5692	0/0:12,0:12:33.11:0,33,2001	0/0:29,0:29:72.25:0,72,3743	0/0:27,0:27:54.15:0,54,3107	0/0:27,0:27:78.27:0,78,4928	0/0:25,0:25:60.21:0,60,3725	0/0:20,0:20:45.15:0,45,2917	0/0:20,0:20:48.16:0,48,2911	0/0:24,0:24:63.22:0,63,4406	0/0:29,0:29:63.22:0,63,4401	0/0:26,0:26:72.24:0,72,4571	0/0:29,0:29:78.27:0,78,5178	0/0:33,0:33:87.27:0,87,5602	0/0:33,0:33:93.32:0,93,6561	0/0:31,0:31:78.27:0,78,5429	1/1:2,13:15:30.10:1298,30,0	0/0:26,0:26:63.22:0,63,4235	0/0:15,0:15:42.12:0,42,2766	0/0:19,0:19:54.19:0,54,3159	0/0:25,0:25:57.17:0,57,3189	0/0:29,0:28:66.21:0,66,3950	0/0:32,0:32:93.32:0,93,6272	0/0:27,0:27:69.24:0,69,4166	0/0:35,0:35:99:0,99,6952	0/0:23,0:23:57.20:0,57,3667	0/0:32,0:32:81.27:0,81,5348	0/0:36,0:35:99:0,105,7391	0/0:7,0:7:21.07:0,21,1527
chr10	97898510	.	C	CCAGAAATCTTCCTGTGGCTGTT	4216.68	PASS	AB=0.739;AC=42;AF=0.955;AN=44;BaseQRankSum=-3.678;DP=63;FS=5.241;HRun=0;HaplotypeScore=39.0416;InbreedingCoeff=-0.1530;MQ=114.62;MQ0=0;MQRankSum=-3.103;QD=69.13;ReadPosRankSum=-1.954;VQSLOD=2.6211;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:8.99:140,9,0	./.	0/1:4,0:7:63.68:430,0,64	0/1:5,1:7:6.11:985,0,6	1/1:1,0:1:3.01:90,3,0	1/1:3,0:3:6.01:132,6,0	1/1:1,0:1:3.01:113,3,0	1/1:3,0:3:9.02:137,9,0	1/1:2,0:2:6:130,6,0	1/1:3,0:3:9.02:128,9,0	1/1:4,0:4:8.99:175,9,0	1/1:2,0:2:5.98:128,6,0	1/1:2,0:2:6.01:130,6,0	./.	1/1:2,0:2:6.02:216,6,0	1/1:2,0:2:5.98:113,6,0	1/1:3,0:3:6.02:200,6,0	./.	1/1:5,0:5:12.04:364,12,0	1/1:1,0:1:3.01:112,3,0	1/1:2,0:2:5.97:45,6,0	1/1:2,0:2:5.99:130,6,0	./.	./.	./.	1/1:1,0:1:2.99:24,3,0	1/1:3,0:3:8.99:273,9,0	1/1:1,0:1:2.99:24,3,0
chr10	97899785	.	AT	A	3903.77	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.534;DP=489;FS=8.153;HRun=2;HaplotypeScore=54.0536;InbreedingCoeff=0.9332;MQ=61.35;MQ0=0;MQRankSum=3.593;QD=35.17;ReadPosRankSum=-0.136;VQSLOD=3.4993;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:78.23:981,78,0	0/0:3,0:3:9.03:0,9,134	0/0:6,0:5:3.07:0,3,125	0/0:12,0:11:19.24:0,19,298	0/0:30,0:30:81.15:0,81,1131	0/0:17,0:17:48.11:0,48,638	0/0:8,0:8:24.06:0,24,319	1/1:1,31:32:93.29:1187,93,0	0/0:6,0:6:12.04:0,12,179	0/0:25,0:25:72.12:0,72,968	0/0:29,0:29:81.27:0,81,1195	0/0:15,0:15:45.14:0,45,647	0/0:20,0:20:42.14:0,42,623	0/0:8,0:8:24.08:0,24,351	0/0:17,0:17:51.15:0,51,721	0/0:16,0:16:45.15:0,45,649	0/0:22,0:22:66.16:0,66,940	1/1:0,22:22:57.19:737,57,0	0/0:9,0:9:27.06:0,27,337	0/0:33,0:33:99:0,99,1365	0/0:11,0:11:33.08:0,33,469	0/0:7,0:7:18.06:0,18,268	0/0:14,0:14:38.97:0,39,526	0/0:5,0:5:15.05:0,15,223	0/0:31,0:31:93.22:0,93,1314	1/1:5,16:20:60.10:714,60,0	0/0:34,0:34:99:0,99,1412	1/1:2,6:8:24.06:284,24,0
chr10	97899847	.	A	AT	706.62	PASS	AB=0.976;AC=7;AF=0.125;AN=56;BaseQRankSum=8.648;DP=578;FS=12.618;HRun=3;HaplotypeScore=78.2582;InbreedingCoeff=0.5199;MQ=68.29;MQ0=0;MQRankSum=0.489;QD=7.52;ReadPosRankSum=-2.356;VQSLOD=-0.6529;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:45:560,45,0	0/0:3,0:3:9.03:0,9,106	0/1:12,1:13:5.11:5,0,159	0/0:15,0:15:17.44:0,17,232	0/0:27,0:27:63.01:0,63,696	0/0:16,0:16:42:0,42,454	0/0:20,0:20:59.97:0,60,638	0/1:27,0:28:36.01:83,0,36	0/0:17,0:17:51.01:0,51,551	0/0:28,0:28:80.89:0,81,884	0/0:26,0:26:72.12:0,72,805	0/0:21,0:21:51.15:0,51,605	0/0:23,0:23:65.95:0,66,711	0/0:17,0:17:44.93:0,45,480	0/0:18,0:18:48.13:0,48,556	0/0:20,0:20:54.47:0,54,650	0/0:29,0:29:81.03:0,81,877	0/0:32,0:32:84.17:0,84,959	0/0:19,0:18:51.05:0,51,559	0/0:24,0:24:66.08:0,66,736	0/0:21,0:21:63.14:0,63,722	0/0:24,0:24:54.96:0,55,749	0/0:18,0:18:44.98:0,45,485	0/0:14,0:14:30.09:0,30,355	0/0:30,0:30:77.95:0,78,832	1/1:23,0:23:21.27:165,21,0	0/0:22,0:22:54.12:0,54,612	0/1:8,0:8:30.48:32,0,30
chr10	97899850	.	T	TA	1514.18	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=0.703;DP=586;FS=19.730;HRun=10;HaplotypeScore=77.3691;InbreedingCoeff=0.7910;MQ=64.73;MQ0=0;MQRankSum=0.150;QD=18.03;ReadPosRankSum=-2.041;VQSLOD=2.2806;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:60.24:179,0,60	0/0:3,0:3:8.99:0,9,74	0/0:10,0:10:6.35:0,6,91	0/0:14,0:14:20.39:0,20,154	0/0:25,0:25:62.81:0,63,504	0/0:16,0:16:38.27:0,38,298	0/0:21,0:21:44.91:0,45,369	1/1:5,23:28:63.11:652,63,0	0/0:16,0:17:43.96:0,44,350	0/0:32,0:32:74.82:0,75,604	0/0:28,0:28:62.90:0,63,514	0/0:24,0:24:65.71:0,66,513	0/0:24,0:24:59.89:0,60,488	0/0:17,0:17:41.70:0,42,328	0/0:17,0:17:50.90:0,51,412	0/0:20,0:20:32.73:0,33,419	0/0:29,0:29:65.85:0,66,536	0/0:32,0:32:80.87:0,81,661	0/0:20,0:19:47.79:0,48,373	0/0:23,0:23:59.90:0,60,489	0/0:21,0:21:56.93:0,57,468	0/0:25,1:26:39.84:0,40,524	0/0:18,0:18:47.54:0,48,370	0/0:14,0:14:38.85:0,39,306	0/0:30,0:30:65.83:0,66,533	1/1:3,20:23:60.15:639,60,0	0/0:20,0:21:58.88:0,59,463	1/1:2,6:8:18.05:192,18,0
chr10	97899928	.	G	GT	1188.02	PASS	AB=0.858;AC=17;AF=0.304;AN=56;BaseQRankSum=11.790;DP=602;FS=119.512;HRun=1;HaplotypeScore=154.0254;InbreedingCoeff=-0.4182;MQ=56.13;MQ0=3;MQRankSum=-9.306;QD=3.28;ReadPosRankSum=3.105;VQSLOD=0.0086;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,3:19:32.70:0,33,315	0/1:8,1:9:9.05:9,0,148	0/0:31,0:22:37.68:0,38,649	0/0:29,0:19:13.55:0,14,374	0/1:16,4:20:49.96:53,0,50	0/1:13,0:14:14.75:15,0,264	0/0:20,2:24:15.85:0,16,419	0/1:28,0:28:4.54:5,0,903	0/0:15,2:18:8.69:0,9,254	0/1:30,4:35:99:427,0,706	0/1:15,6:22:24.55:25,0,121	0/0:21,1:22:18.79:0,19,467	0/1:20,4:25:48.57:49,0,207	0/1:17,2:19:11.22:11,0,221	0/0:9,5:15:15.82:0,16,147	0/1:16,7:23:45.04:45,0,245	0/1:20,1:21:15.83:16,0,541	0/1:16,2:19:57.72:58,0,529	0/1:13,3:16:99:116,0,293	0/1:16,1:17:6.80:7,0,163	0/0:17,0:17:30.98:0,31,421	0/1:14,2:17:13.26:13,0,192	0/0:22,1:23:35.18:0,35,372	0/0:14,0:14:15.82:0,16,148	0/1:26,6:32:57.30:57,0,277	0/1:21,11:31:99:422,0,492	0/0:26,2:28:63.07:0,63,801	0/1:6,1:7:17.25:17,0,230
chr10	97900771	.	TGA	T	484.62	PASS	AB=0.961;AC=12;AF=0.273;AN=44;BaseQRankSum=8.142;DP=499;FS=72.567;HRun=0;HaplotypeScore=205.4236;InbreedingCoeff=-0.2042;MQ=36.62;MQ0=28;MQRankSum=-9.508;QD=1.96;ReadPosRankSum=2.880;VQSLOD=0.2710;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:7,1:7:31.49:31,0,123	./.	./.	0/0:15,1:16:16.75:0,17,288	0/1:16,1:15:5.37:5,0,207	0/0:30,0:29:40.51:0,41,795	1/1:20,0:4:5.74:38,6,0	0/1:32,0:30:57.45:57,0,769	0/1:27,0:22:42.22:42,0,804	0/0:10,3:12:2.15:0,2,52	0/0:35,0:34:44.56:0,45,849	0/1:32,1:32:99:167,0,729	0/1:31,2:33:22.57:23,0,361	0/1:23,0:24:13.29:13,0,349	0/0:6,0:5:8.90:0,9,127	0/1:18,1:16:37.37:37,0,370	./.	0/1:19,1:9:78.23:78,0,203	0/0:18,1:19:26.55:0,27,546	0/0:60,2:56:23.09:0,23,980	0/0:16,1:17:27.09:0,27,466	0/0:6,0:6:8.86:0,9,151	0/0:29,1:28:13.78:0,14,279	0/0:14,0:13:26.63:0,27,436	./.	0/1:14,0:14:99:127,0,320	./.
chr10	97900779	.	TGA	T	356.78	PASS	AB=0.967;AC=12;AF=0.273;AN=44;BaseQRankSum=9.092;DP=564;FS=54.822;HRun=0;HaplotypeScore=250.4393;InbreedingCoeff=-0.2014;MQ=37.87;MQ0=33;MQRankSum=-9.741;QD=1.32;ReadPosRankSum=2.154;VQSLOD=0.7835;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/1:12,1:11:35.01:35,0,235	./.	./.	0/0:20,0:20:25.07:0,25,381	0/1:16,1:15:25.13:25,0,216	0/0:34,0:33:50.92:0,51,1070	1/1:19,0:4:5.83:34,6,0	0/1:34,1:32:31.98:32,0,867	0/1:31,3:28:12.08:12,0,874	0/0:15,1:15:4.69:0,5,106	0/0:42,0:40:52.53:0,53,997	0/1:36,4:39:99:159,0,936	0/1:34,0:34:63.38:63,0,400	0/1:25,0:25:45.84:46,0,373	0/0:6,0:5:8.95:0,9,132	0/1:20,0:17:34.37:34,0,488	./.	0/1:20,0:10:37.15:37,0,250	0/0:21,0:21:27.84:0,28,795	0/0:68,0:61:50.37:0,50,1247	0/0:23,0:23:35.79:0,36,577	0/0:8,2:10:11.85:0,12,181	0/0:30,0:29:19.68:0,20,364	0/0:17,0:16:29.49:0,29,538	./.	0/1:14,0:14:16.60:17,0,354	./.
chr10	97900785	.	TGA	T	153.13	PASS	AB=0.983;AC=10;AF=0.217;AN=46;BaseQRankSum=10.740;DP=632;FS=68.915;HRun=0;HaplotypeScore=292.6626;InbreedingCoeff=-0.0782;MQ=38.20;MQ0=36;MQRankSum=-10.183;QD=0.61;ReadPosRankSum=0.094;VQSLOD=-0.3420;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:14,0:12:3.56:0,4,279	./.	./.	0/0:25,0:24:26.34:0,26,422	0/0:20,0:18:14.38:0,14,296	0/0:34,0:33:25.11:0,25,1108	1/1:18,0:4:3.63:14,4,0	0/0:36,0:33:1.29:0,1,951	0/1:39,1:35:7.64:8,0,993	0/0:20,2:21:10.24:0,10,189	0/0:44,0:42:54.02:0,54,1087	0/1:40,0:39:60.70:61,0,1165	0/1:37,1:38:35.60:36,0,518	0/1:28,0:28:12.54:13,0,494	0/0:6,0:5:8.95:0,9,132	0/1:21,1:19:95.16:95,0,601	./.	0/1:20,1:10:41.78:42,0,379	0/0:22,1:23:36.98:0,37,848	0/0:68,4:65:89.25:0,89,1575	0/0:26,1:27:29.32:0,29,632	0/0:18,1:19:9.96:0,10,211	0/0:29,1:29:22.69:0,23,419	0/1:27,0:26:3.53:4,0,530	0/0:3,0:2:0.47:0,0,1	0/1:16,0:16:4.88:5,0,398	./.
chr10	97900791	.	TGTGA	T	464.79	PASS	AB=0.979;AC=16;AF=0.320;AN=50;BaseQRankSum=11.439;DP=668;FS=54.292;HRun=0;HaplotypeScore=297.7705;InbreedingCoeff=-0.0712;MQ=38.40;MQ0=36;MQRankSum=-10.930;QD=1.50;ReadPosRankSum=-2.273;VQSLOD=0.3217;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/1:13,1:12:23.76:24,0,383	./.	0/0:11,0:1:3.01:0,3,38	0/0:24,2:25:12.41:0,12,541	0/0:19,0:17:8.47:0,8,517	0/0:37,0:35:33.25:0,33,1566	1/1:16,0:3:3.01:40,3,0	0/1:35,0:32:36.25:36,0,1347	0/1:38,3:36:99:226,0,1370	0/1:24,2:26:0.18:0,0,343	0/0:46,1:44:53.40:0,53,1426	0/1:41,0:40:34.14:34,0,1691	0/1:40,0:40:68.76:69,0,756	0/1:29,0:28:53.24:53,0,603	0/0:8,0:7:8.98:0,9,157	0/0:22,0:20:5.43:0,5,946	./.	0/1:22,0:10:19.81:20,0,594	0/1:23,0:23:14.32:14,0,1104	0/0:73,0:66:91.70:0,92,2360	0/0:29,2:30:24.30:0,24,860	0/0:19,0:19:9.76:0,10,308	0/0:32,0:31:35.58:0,36,770	0/0:28,2:30:18.26:0,18,826	1/1:4,0:2:3.01:42,3,0	0/1:17,0:17:29.58:30,0,573	1/1:1,0:1:2.98:22,3,0
chr10	97900795	.	A	ATG	177.08	PASS	AB=0.913;AC=7;AF=0.140;AN=50;BaseQRankSum=7.259;DP=698;FS=32.805;HRun=0;HaplotypeScore=298.1956;InbreedingCoeff=0.0097;MQ=38.38;MQ0=35;MQRankSum=-7.318;QD=1.22;ReadPosRankSum=-2.102;VQSLOD=1.2472;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/1:13,1:13:64.23:64,0,249	./.	0/0:12,0:1:3.01:0,3,35	0/0:25,3:27:24.97:0,25,390	0/0:20,0:18:24.31:0,24,375	0/0:36,0:34:69.85:0,70,1047	0/0:15,0:3:2.98:0,3,21	0/0:36,0:33:51.49:0,51,916	0/1:42,2:38:14.43:14,0,1081	0/1:24,3:27:19.93:20,0,364	0/0:47,0:44:61.30:0,61,1033	0/0:42,0:41:99:0,105,1485	0/0:39,0:39:36.26:0,36,604	0/0:31,0:29:35.99:0,36,490	0/0:9,0:8:11.71:0,12,152	0/0:23,0:21:51.76:0,52,721	./.	0/0:23,0:12:32.50:0,32,442	0/1:24,1:25:82.73:83,0,679	0/0:77,0:69:96.07:0,96,1556	0/0:32,2:34:31.92:0,32,627	0/0:16,5:20:3.80:0,4,188	0/0:35,0:34:40.67:0,41,653	0/1:24,7:30:58.26:58,0,527	1/1:3,1:2:3.01:59,3,0	0/0:17,0:17:37.52:0,38,525	0/0:1,0:1:3.01:0,3,34
chr10	97900831	.	A	AGT	10526.94	PASS	AB=0.792;AC=36;AF=0.692;AN=52;BaseQRankSum=-3.710;DP=925;FS=0.700;HRun=0;HaplotypeScore=332.0353;InbreedingCoeff=0.3040;MQ=38.51;MQ0=37;MQRankSum=3.571;QD=12.78;ReadPosRankSum=1.676;VQSLOD=4.1106;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:15,0:15:19.66:182,20,0	0/0:21,0:1:2.68:0,3,11	0/0:44,0:7:11.99:0,12,111	1/1:23,10:32:23.37:310,23,0	1/1:11,12:22:16.11:217,16,0	1/1:25,11:34:7.02:624,7,0	0/0:29,0:8:1.99:0,2,133	1/1:35,14:46:14.35:709,14,0	1/1:48,13:54:29.25:1005,29,0	0/1:27,10:36:83.56:273,0,84	1/1:33,21:51:71.19:986,71,0	1/1:26,25:51:30.72:1106,31,0	1/1:32,19:51:41.74:471,42,0	1/1:22,8:26:17.93:264,18,0	1/1:9,0:8:5.91:59,6,0	0/1:17,6:25:20.93:372,0,21	./.	1/1:21,5:12:29.31:427,29,0	0/1:23,7:30:12.59:284,0,13	1/1:65,36:95:98.18:1363,98,0	1/1:34,14:45:28.68:411,29,0	0/1:27,11:36:22.62:441,0,23	0/1:27,13:41:50.40:306,0,50	0/1:32,11:42:1.49:419,0,1	0/0:3,0:2:3.01:0,3,36	1/1:10,7:18:25.70:299,26,0	0/0:2,0:2:6.02:0,6,73
chr10	97900862	.	T	TTG	270.94	PASS	AB=0.911;AC=10;AF=0.208;AN=48;BaseQRankSum=4.806;DP=912;FS=25.751;HRun=0;HaplotypeScore=345.0148;InbreedingCoeff=-0.0945;MQ=47.27;MQ0=26;MQRankSum=-3.976;QD=0.84;ReadPosRankSum=-0.956;VQSLOD=0.9528;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:11,3:14:78.66:116,0,79	0/1:55,0:7:2.19:2,0,63	0/0:77,0:19:7.48:0,7,85	0/0:27,5:32:14.54:0,15,177	0/0:22,0:22:20.50:0,20,253	0/0:23,2:25:42.02:0,42,499	./.	0/0:39,4:40:37.71:0,38,474	0/1:53,4:49:87.81:88,0,659	0/0:26,8:31:14.89:0,15,150	0/1:44,4:47:17.49:17,0,484	0/1:52,1:53:35:35,0,592	0/1:44,4:49:47.51:48,0,293	0/0:32,0:29:32.73:0,33,384	./.	0/0:26,1:28:14.65:0,15,655	./.	0/0:15,0:11:21.06:0,21,251	0/1:22,7:26:12.77:13,0,211	0/0:106,0:100:99:0,123,1570	0/0:42,6:45:29.37:0,29,324	0/0:32,3:34:21.98:0,22,238	0/0:38,0:38:51.12:0,51,613	0/0:32,3:34:3.83:0,4,256	1/1:1,0:1:3:27,3,0	0/1:15,2:17:55.70:56,0,256	0/0:2,0:2:6.02:0,6,71
chr10	97900888	.	GC	G	16334.91	PASS	AC=42;AF=0.913;AN=46;BaseQRankSum=-6.634;DP=829;FS=2.784;HRun=1;HaplotypeScore=268.5538;InbreedingCoeff=0.8260;MQ=54.63;MQ0=18;MQRankSum=-0.705;QD=25.33;ReadPosRankSum=4.424;VQSLOD=4.3976;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,6:7:15.93:201,16,0	0/0:77,3:19:4.41:0,4,429	0/0:97,3:25:27.84:0,28,335	1/1:7,17:25:31.52:394,32,0	1/1:1,13:14:24.53:336,25,0	1/1:5,26:30:59.82:839,60,0	./.	1/1:2,43:42:80.85:1111,81,0	1/1:4,33:36:99:1412,105,0	1/1:10,14:22:16.91:234,17,0	1/1:5,33:38:72.39:951,72,0	1/1:2,40:41:91.46:1229,91,0	1/1:7,36:43:57.81:760,58,0	1/1:0,30:30:38.90:546,39,0	./.	1/1:2,29:30:84.26:1153,84,0	./.	1/1:2,9:10:30.09:402,30,0	1/1:8,19:26:52.66:743,53,0	1/1:6,85:88:99:2520,181,0	1/1:9,28:37:52.24:716,52,0	1/1:0,23:22:29.35:418,29,0	1/1:4,43:47:87:1194,87,0	1/1:1,23:24:41.73:586,42,0	./.	1/1:0,16:16:39.13:545,39,0	1/1:0,1:1:3.01:42,3,0
chr10	97900998	.	T	TGA	69.33	PASS	AB=0.977;AC=4;AF=0.071;AN=56;BaseQRankSum=5.481;DP=967;FS=15.589;HRun=0;HaplotypeScore=199.5807;InbreedingCoeff=0.3592;MQ=46.56;MQ0=34;MQRankSum=-4.761;QD=1.69;ReadPosRankSum=-0.997;VQSLOD=1.4945;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:4:2.92:0,3,41	0/0:17,0:17:25.23:0,25,345	0/0:40,0:5:10.59:0,11,133	0/0:48,0:7:17.97:0,18,233	0/0:22,0:22:27.04:0,27,347	0/0:26,0:25:35.63:0,36,457	0/0:50,0:49:99:0,126,1772	0/0:16,0:7:6.02:0,6,91	0/0:54,0:51:99:0,121,1726	0/0:38,0:34:93.27:0,93,1390	0/0:20,0:19:12.50:0,12,164	0/0:47,0:46:99:0,105,1484	0/0:47,0:45:96.61:0,97,1308	0/0:44,0:43:83.76:0,84,1212	0/0:44,0:43:81.23:0,81,1175	1/1:7,6:12:14.85:133,15,0	0/0:42,0:42:99:0,115,1692	0/0:5,0:5:11.52:0,12,117	0/0:28,0:15:42.11:0,42,598	0/0:29,0:27:47.41:0,47,678	0/0:142,0:131:99:0,325,4718	0/0:39,0:37:33.05:0,33,437	0/0:28,0:27:39:0,39,525	0/0:51,0:50:99:0,99,1420	0/0:29,0:29:54.15:0,54,762	0/1:20,1:21:18.25:18,0,700	0/0:16,0:15:48.14:0,48,701	0/1:7,0:6:21.95:29,0,22
chr10	97901031	.	G	GTA	539.25	PASS	AB=0.629;AC=5;AF=0.089;AN=56;BaseQRankSum=6.635;DP=937;FS=42.657;HRun=0;HaplotypeScore=176.2505;InbreedingCoeff=0.3774;MQ=48.15;MQ0=25;MQRankSum=-6.058;QD=18.59;ReadPosRankSum=0.166;VQSLOD=2.0551;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:3:0.47:1,0,0	0/0:19,0:19:22.85:0,23,313	0/0:19,0:2:6.02:0,6,74	0/0:18,0:3:3.01:0,3,45	0/0:27,0:27:37.33:0,37,592	0/0:22,0:21:29.72:0,30,433	0/0:55,0:53:99:0,132,1867	0/0:21,0:9:14.77:0,15,130	0/0:54,0:52:99:0,118,1630	0/0:45,0:43:99:0,111,1462	0/0:24,0:21:17.68:0,18,254	0/0:47,0:47:99:0,102,1481	0/0:47,0:47:99:0,109,1527	0/0:39,0:38:77.83:0,78,1072	0/0:43,0:42:87.24:0,87,1252	0/0:15,0:14:6.84:0,7,101	0/0:41,0:41:99:0,108,1595	0/0:6,0:6:3.38:0,3,160	0/0:30,0:19:53.99:0,54,766	0/0:28,0:27:47.42:0,47,729	0/0:151,0:137:99:0,322,4650	0/0:31,0:30:55.04:0,55,769	0/0:29,0:28:44.70:0,45,667	0/0:47,0:47:90.25:0,90,1305	0/0:30,0:30:48.06:0,48,695	0/1:9,13:20:33.24:584,0,33	0/0:19,0:18:45.10:0,45,615	1/1:2,1:2:3.01:46,3,0
chr10	97901036	.	TGTGA	T	625.69	PASS	AB=0.923;AC=7;AF=0.130;AN=54;BaseQRankSum=8.288;DP=925;FS=70.236;HRun=0;HaplotypeScore=194.6865;InbreedingCoeff=0.6992;MQ=48.61;MQ0=31;MQRankSum=-7.801;QD=11.17;ReadPosRankSum=-1.298;VQSLOD=0.2524;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:17,0:17:22.75:0,23,516	0/0:18,0:2:6.02:0,6,96	0/0:19,0:2:5.97:0,6,94	0/0:27,0:27:42.05:0,42,1000	0/0:22,0:22:32.84:0,33,773	0/0:54,1:53:99:0,124,2851	1/1:19,0:9:12.58:46,13,0	0/0:51,0:49:99:0,102,2453	0/0:40,0:38:99:0,101,2103	0/0:26,0:23:18.02:0,18,425	0/0:47,0:47:99:0,105,2376	0/0:46,0:46:99:0,110,2440	0/0:44,0:43:92.47:0,92,1923	0/0:45,0:44:86.69:0,87,2054	0/1:11,1:11:30.83:47,0,31	0/0:41,0:41:99:0,108,2595	0/0:6,0:6:14.53:0,15,128	0/0:29,0:17:48.16:0,48,1123	0/0:28,0:27:48.16:0,48,1215	0/0:148,0:136:99:0,313,7451	0/0:29,0:29:51.91:0,52,1277	0/0:28,0:27:51.16:0,51,1160	0/0:49,0:49:93.04:0,93,2266	0/0:29,0:29:45.02:0,45,1014	1/1:20,3:21:23.29:636,23,0	0/0:20,0:19:34.99:0,35,939	1/1:2,0:1:3.01:32,3,0
chr10	97901038	.	TGA	T	361.95	PASS	AB=0.900;AC=10;AF=0.179;AN=56;BaseQRankSum=8.308;DP=915;FS=45.638;HRun=0;HaplotypeScore=165.3274;InbreedingCoeff=0.5947;MQ=48.42;MQ0=35;MQRankSum=-7.400;QD=5.75;ReadPosRankSum=-1.641;VQSLOD=1.5004;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:3:0.47:1,0,0	0/0:17,0:17:23.41:0,23,386	0/0:17,0:2:5.38:0,5,60	0/0:24,0:2:6.02:0,6,90	0/0:27,0:27:41.72:0,42,725	0/0:22,0:22:32.46:0,32,594	0/0:54,0:53:99:0,130,2225	1/1:13,5:8:15.05:228,15,0	0/0:48,0:46:99:0,102,1823	0/0:41,0:38:99:0,102,1554	0/0:27,0:24:18.02:0,18,309	0/0:46,0:46:99:0,104,1751	0/0:46,0:46:99:0,110,1848	0/0:42,0:41:95.22:0,95,1422	0/0:42,0:41:86.84:0,87,1513	0/1:9,3:11:48.98:49,0,49	0/0:41,0:41:99:0,108,1916	0/1:6,0:6:0.04:0,0,71	0/0:30,0:17:48.15:0,48,863	0/0:29,0:28:48.12:0,48,871	0/0:145,0:134:99:0,315,5579	0/0:30,0:30:51.86:0,52,903	0/0:27,0:26:51.13:0,51,856	0/0:48,0:48:76.06:0,76,1621	0/0:29,0:29:45.01:0,45,769	1/1:19,2:18:4.74:164,5,0	0/0:20,0:19:34.88:0,35,652	1/1:2,0:1:3.01:48,3,0
chr10	97901065	.	GTA	G	57.10	PASS	AB=0.900;AC=7;AF=0.135;AN=52;BaseQRankSum=4.704;DP=899;FS=26.341;HRun=0;HaplotypeScore=147.3430;InbreedingCoeff=0.6688;MQ=49.81;MQ0=32;MQRankSum=-2.487;QD=2.48;ReadPosRankSum=-2.658;VQSLOD=0.5761;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:3.41:19,3,0	0/0:15,0:14:26.77:0,27,432	0/0:28,1:6:14.84:0,15,180	0/0:29,0:3:9.03:0,9,172	0/0:32,0:32:50.99:0,51,961	0/0:17,1:18:39.10:0,39,661	0/0:49,0:48:99:0,118,1967	./.	0/0:48,0:46:99:0,108,1888	0/0:42,0:37:99:0,111,1864	0/0:28,0:24:23.91:0,24,418	0/0:41,0:41:94.16:0,94,1806	0/0:51,0:51:99:0,122,2130	0/0:48,0:48:99:0,120,2107	0/0:43,0:43:99:0,112,1865	1/1:6,2:8:11.56:104,12,0	0/0:40,0:40:96.15:0,96,1688	1/1:1,0:1:2.92:17,3,0	0/0:32,0:21:54.73:0,55,903	0/0:31,0:30:45.73:0,46,854	0/0:117,1:110:99:0,271,4741	0/0:32,0:32:48.91:0,49,1000	0/0:30,0:29:60.14:0,60,1123	0/0:56,0:56:99:0,126,2215	0/0:34,0:34:54.10:0,54,991	0/1:8,1:8:38.95:39,0,137	0/0:23,0:22:57.88:0,58,938	./.
chr10	97901092	.	TGA	T	159.74	PASS	AB=0.871;AC=8;AF=0.143;AN=56;BaseQRankSum=6.385;DP=881;FS=4.576;HRun=0;HaplotypeScore=143.5839;InbreedingCoeff=0.4527;MQ=49.93;MQ0=34;MQRankSum=-6.604;QD=2.32;ReadPosRankSum=-3.945;VQSLOD=1.3312;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:2.84:15,3,0	0/0:19,0:17:32.91:0,33,464	0/0:30,0:4:11.86:0,12,116	0/1:28,0:4:1.67:2,0,69	0/0:28,0:28:57.17:0,57,991	0/0:19,0:19:44.97:0,45,761	0/0:52,0:51:99:0,127,2194	0/1:9,1:8:4.79:100,0,5	0/0:43,0:41:99:0,105,1869	0/0:39,0:36:93:0,93,1764	0/0:24,0:22:24.46:0,24,386	0/0:43,0:42:99:0,105,1884	0/0:45,0:45:99:0,120,2140	0/0:52,0:52:99:0,129,2342	0/0:39,0:38:99:0,108,1945	0/1:5,14:19:0.17:136,0,0	0/0:41,0:41:83.33:0,83,1653	1/1:1,0:1:2.92:17,3,0	0/0:31,0:17:51.15:0,51,908	0/0:27,0:26:41.87:0,42,670	0/0:97,0:88:99:0,216,3870	0/0:39,0:38:78.94:0,79,1362	0/0:27,0:26:56.53:0,57,975	0/0:62,0:61:99:0,142,2546	0/0:32,1:33:51.60:0,52,855	0/1:6,0:4:4.64:5,0,123	0/0:21,0:21:49.45:0,49,1012	0/0:1,0:1:2.88:0,3,15
chr10	97901131	.	A	ATG	499.39	PASS	AB=0.833;AC=3;AF=0.054;AN=56;BaseQRankSum=1.126;DP=928;FS=2.702;HRun=0;HaplotypeScore=166.2118;InbreedingCoeff=0.4074;MQ=48.77;MQ0=33;MQRankSum=-4.651;QD=13.87;ReadPosRankSum=-5.957;VQSLOD=2.3645;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:9:1.54:0,2,4	0/0:21,0:19:38.36:0,38,464	0/0:38,0:6:11.13:0,11,145	0/0:38,0:13:23.81:0,24,218	0/0:32,0:31:62.96:0,63,758	0/0:19,0:19:39.12:0,39,478	0/0:52,0:52:98.41:0,98,1168	1/1:19,12:23:7.23:551,7,0	0/0:42,0:39:90.15:0,90,1022	0/0:41,0:37:71.91:0,72,782	0/0:18,0:18:3.23:0,3,278	0/0:35,0:37:69.96:0,70,837	0/0:45,0:42:82.22:0,82,1151	0/0:50,0:50:76.77:0,77,1026	0/0:49,0:50:99:0,101,1149	0/0:21,0:21:9.79:0,10,185	0/0:42,0:42:83.82:0,84,995	0/0:1,0:1:3.01:0,3,38	0/0:24,0:19:49.23:0,49,537	0/0:22,0:19:32.07:0,32,377	0/0:88,0:76:99:0,130,1612	0/0:48,0:46:42.17:0,42,833	0/0:23,0:22:38.92:0,39,467	0/0:67,0:67:99:0,139,1662	0/0:29,0:29:39.01:0,39,452	0/0:8,0:4:9.03:0,9,113	0/0:23,0:23:42.75:0,43,562	0/1:4,1:4:31.62:44,0,32
chr10	97901157	.	TTG	T	427.42	PASS	AB=0.959;AC=20;AF=0.370;AN=54;BaseQRankSum=1.345;DP=861;FS=0.608;HRun=0;HaplotypeScore=168.2295;InbreedingCoeff=-0.3887;MQ=48.42;MQ0=31;MQRankSum=0.409;QD=0.73;ReadPosRankSum=-1.354;VQSLOD=2.4403;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:12:0.02:0,0,0	0/1:18,0:18:11.45:11,0,113	0/0:19,0:7:2.94:0,3,18	./.	0/1:26,1:29:7.47:7,0,134	0/1:24,0:24:28.36:28,0,260	0/1:44,1:44:40.17:40,0,368	0/0:23,0:18:2.98:0,3,21	0/1:41,1:39:47.22:47,0,549	0/1:47,1:41:7.26:7,0,490	0/0:19,0:17:13.61:0,14,186	0/1:33,1:35:27.20:27,0,440	0/0:33,0:28:41.50:0,42,584	0/1:41,2:41:20.95:21,0,518	0/1:44,5:49:99:104,0,569	1/1:23,0:25:2.72:12,3,0	0/1:32,2:33:79.72:80,0,349	0/1:4,0:3:2.77:9,0,3	0/1:25,0:18:7.19:7,0,188	0/1:19,2:19:46.81:47,0,167	0/1:86,1:74:52.15:52,0,648	0/0:44,1:43:20.32:0,20,449	0/0:20,0:18:5.65:0,6,90	0/0:68,0:67:15.52:0,16,878	0/0:28,0:28:20.62:0,21,311	0/1:15,1:10:40.22:40,0,111	0/1:18,1:20:24.10:24,0,255	0/1:4,0:5:7.68:8,0,22
chr10	97901400	.	A	AT	2263.14	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.749;DP=818;FS=2.893;HRun=6;HaplotypeScore=81.8962;InbreedingCoeff=0.9706;MQ=78.41;MQ0=0;MQRankSum=-3.571;QD=32.33;ReadPosRankSum=3.058;VQSLOD=3.7913;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,42:43:99:1472,117,0	0/0:16,0:16:42.06:0,42,419	0/0:23,0:23:57.11:0,57,577	0/0:13,0:13:33.07:0,33,336	0/0:27,0:27:78.16:0,78,788	0/0:25,0:25:69.14:0,69,697	0/0:27,0:27:78.13:0,78,785	0/0:30,0:30:81.16:0,81,817	0/0:26,0:26:66.14:0,66,672	0/0:33,0:33:84.18:0,84,852	0/0:21,0:21:54.12:0,54,551	0/0:45,0:45:99:0,123,1243	0/0:28,0:28:81.15:0,81,812	0/0:40,0:40:99:0,111,1125	0/0:54,0:54:99:0,156,1578	1/1:1,26:27:47.64:913,48,0	0/0:32,0:32:84.15:0,84,849	0/0:26,0:26:75.14:0,75,757	0/0:18,0:18:48.11:0,48,489	0/0:37,0:37:99:0,108,1102	0/0:27,0:27:72.16:0,72,735	0/0:35,0:35:99:0,102,1020	0/0:23,0:23:60.12:0,60,607	0/0:43,0:43:99:0,123,1241	0/0:37,0:37:99:0,108,1093	0/0:28,0:28:81.14:0,81,815	0/0:31,0:31:93.17:0,93,929	0/0:3,0:3:9.02:0,9,92
chr10	97902195	.	G	GC	4708.25	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-13.779;DP=628;FS=3.378;HRun=3;HaplotypeScore=60.8875;InbreedingCoeff=0.9951;MQ=78.45;MQ0=0;MQRankSum=-0.009;QD=36.22;ReadPosRankSum=-0.582;VQSLOD=5.1732;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:34:84.28:1176,84,0	0/0:7,0:7:18.06:0,18,216	0/0:21,0:21:44.41:0,44,670	0/0:18,0:18:39.06:0,39,420	0/0:28,0:28:84.25:0,84,996	0/0:23,0:23:69.21:0,69,828	0/0:21,0:21:57.17:0,57,684	1/1:4,20:24:57.16:762,57,0	0/0:27,0:27:81.11:0,81,951	0/0:26,0:26:75.22:0,75,891	0/0:17,0:17:48.15:0,48,576	0/0:31,0:31:93.26:0,93,1103	0/0:23,0:23:60.18:0,60,718	0/0:24,0:24:69.20:0,69,816	0/0:20,0:20:60.18:0,60,720	1/1:2,27:29:78.26:1091,78,0	0/0:32,0:32:93.26:0,93,1102	1/1:0,25:25:69.23:966,69,0	0/0:25,0:25:75.23:0,75,899	0/0:26,0:26:72.20:0,72,845	0/0:37,0:37:99:0,111,1332	0/0:17,0:17:51.16:0,51,612	0/0:13,0:13:39.11:0,39,457	0/0:19,0:19:54.16:0,54,648	0/0:21,0:21:57.15:0,57,671	1/1:0,12:12:36.12:502,36,0	0/0:22,0:20:52.03:0,52,601	1/1:1,5:6:15.05:210,15,0
chr10	97905612	.	ATC	A	1498.15	PASS	AB=0.532;AC=3;AF=0.054;AN=56;BaseQRankSum=7.725;DP=654;FS=3.887;HRun=0;HaplotypeScore=77.1439;InbreedingCoeff=0.6471;MQ=87.54;MQ0=0;MQRankSum=-4.930;QD=34.05;ReadPosRankSum=1.148;VQSLOD=5.9420;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:99:0,102,1837	0/0:10,0:10:30.10:0,30,549	0/0:24,0:24:68.90:0,69,1151	0/0:31,0:31:91.17:0,91,1553	0/0:22,0:22:66.23:0,66,1210	0/0:29,0:29:84.27:0,84,1502	0/0:30,0:30:84.27:0,84,1497	0/0:31,0:31:78.26:0,78,1383	0/0:14,0:14:42.14:0,42,759	0/0:27,0:27:78.26:0,78,1392	0/0:14,0:14:42.14:0,42,770	0/0:30,0:30:84.26:0,84,1477	0/0:23,0:23:69.22:0,69,1228	0/0:31,0:31:90.31:0,90,1636	0/0:26,0:26:78.27:0,78,1419	0/0:17,0:17:48.16:0,48,867	0/0:17,0:17:48.16:0,48,869	1/1:1,18:19:51.17:731,51,0	0/0:23,0:23:63.22:0,63,1155	0/0:25,0:25:72.23:0,72,1287	0/0:28,0:28:84.29:0,84,1517	0/0:19,0:19:57.20:0,57,1034	0/0:21,0:21:63.20:0,63,1119	0/0:30,0:30:90.31:0,90,1650	0/0:17,0:17:48.15:0,48,851	0/1:3,22:25:37.62:874,0,38	0/0:27,0:27:81.28:0,81,1469	0/0:9,0:9:27.09:0,27,495
chr10	97908818	.	TAAC	T	1008.88	PASS	AB=0.521;AC=1;AF=0.018;AN=56;BaseQRankSum=7.343;DP=679;FS=2.866;HRun=0;HaplotypeScore=92.5794;InbreedingCoeff=0.5601;MQ=81.05;MQ0=0;MQRankSum=-2.400;QD=40.36;ReadPosRankSum=1.362;VQSLOD=4.5561;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.30:0,93,2129	0/0:14,0:14:42.14:0,42,993	0/0:23,0:23:65.96:0,66,1404	0/0:12,0:12:36.12:0,36,779	0/0:31,0:31:90.31:0,90,2106	0/0:31,0:31:93.32:0,93,2157	0/0:10,0:10:30.10:0,30,708	0/0:40,0:40:99:0,120,2774	0/0:21,0:21:63.22:0,63,1488	0/0:27,0:27:81.28:0,81,1887	0/0:23,0:23:69.23:0,69,1524	0/0:24,0:24:69.24:0,69,1631	0/0:31,0:31:87.30:0,87,2030	0/0:26,0:26:78.26:0,78,1802	0/0:31,0:31:93.31:0,93,2154	0/0:22,0:22:66.22:0,66,1495	0/0:24,0:24:72.25:0,72,1702	0/0:14,0:14:42.14:0,42,991	0/0:25,0:25:75.22:0,75,1633	0/0:38,0:38:99:0,111,2623	0/0:15,0:15:45.14:0,45,1018	0/0:24,0:24:72.23:0,72,1630	0/0:31,0:31:90.31:0,90,2052	0/0:12,0:12:36.11:0,36,783	0/0:27,0:27:81.27:0,81,1851	0/1:2,23:25:1.75:1083,0,2	0/0:33,0:33:99:0,99,2341	0/0:13,0:13:39.13:0,39,918
chr10	97908991	.	GT	G	994.36	PASS	AB=0.861;AC=18;AF=0.321;AN=56;BaseQRankSum=10.747;DP=648;FS=0.000;HRun=13;HaplotypeScore=74.2101;InbreedingCoeff=0.3449;MQ=72.08;MQ0=0;MQRankSum=-0.790;QD=3.11;ReadPosRankSum=0.152;VQSLOD=-0.1399;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,15:24:1.63:314,0,2	0/0:8,0:8:9.01:0,9,88	0/0:22,1:17:2.06:0,2,152	0/1:18,2:16:11.98:12,0,111	0/0:32,2:37:48.97:0,49,759	0/0:20,1:24:43.85:0,44,552	0/0:12,0:12:11.15:0,11,270	1/1:13,0:38:45.60:131,46,0	0/0:17,0:17:33.05:0,33,321	0/0:22,1:25:34.81:0,35,456	0/0:29,1:30:28.32:0,28,592	0/0:18,0:18:48.07:0,48,462	0/0:27,0:27:66.07:0,66,624	0/0:15,2:18:13.96:0,14,273	0/0:28,3:32:3.20:0,3,494	1/1:4,0:21:33.52:110,34,0	0/1:22,3:25:11.67:12,0,374	1/1:7,12:20:5.59:195,6,0	0/1:21,4:26:30.70:31,0,366	0/0:23,1:25:31.79:0,32,485	0/1:18,2:20:9:9,0,232	0/0:14,0:14:36.06:0,36,350	0/1:15,2:17:14.24:14,0,346	0/0:17,0:18:41.23:0,41,432	0/1:21,3:24:9.21:9,0,383	1/1:8,12:24:17.63:257,18,0	0/1:39,3:43:4.18:4,0,617	1/1:2,0:18:26.47:76,26,0
chr10	97911315	.	T	TCG	969.83	PASS	AB=1.000;AC=11;AF=0.220;AN=50;BaseQRankSum=-0.106;DP=152;FS=3.975;HRun=0;HaplotypeScore=24.1319;InbreedingCoeff=0.5058;MQ=99.17;MQ0=0;MQRankSum=-0.693;QD=23.65;ReadPosRankSum=0.683;VQSLOD=3.1926;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,1:14:36.01:492,36,0	0/0:2,0:2:5.99:0,6,60	0/0:9,0:6:6.89:0,7,62	0/0:15,0:12:7.98:0,8,40	0/0:5,0:5:12.01:0,12,125	0/0:5,0:5:6.02:0,6,76	0/0:6,0:6:15.03:0,15,175	1/1:5,6:11:18.06:298,18,0	0/0:2,0:2:6.02:0,6,75	0/0:3,0:3:6.02:0,6,76	0/0:4,0:4:9.03:0,9,114	0/0:1,0:1:3.01:0,3,38	0/0:6,0:6:6.02:0,6,76	0/0:4,0:4:6.02:0,6,75	./.	1/1:6,0:6:6.02:100,6,0	./.	1/1:2,0:2:3.01:50,3,0	0/0:9,0:9:9.02:0,9,101	0/0:8,0:8:15.05:0,15,188	0/0:4,0:4:9:0,9,85	0/0:6,0:6:6.02:0,6,76	./.	0/0:6,0:6:8.54:0,9,113	0/0:5,0:5:6.02:0,6,76	0/1:7,0:7:22.38:128,0,22	0/0:7,0:7:12.03:0,12,138	1/1:1,0:1:3.01:50,3,0
chr10	97911326	.	CGT	C	269.45	PASS	AB=0.556;AC=11;AF=0.212;AN=52;BaseQRankSum=4.519;DP=113;FS=7.986;HRun=0;HaplotypeScore=21.6860;InbreedingCoeff=0.4331;MQ=92.27;MQ0=1;MQRankSum=0.623;QD=8.69;ReadPosRankSum=-0.588;VQSLOD=0.9981;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,7:14:31.61:258,32,0	0/0:2,0:2:5.99:0,6,80	0/0:9,0:3:4.49:0,4,50	0/0:15,0:10:4.45:0,4,62	0/0:4,0:4:12.01:0,12,165	0/0:3,0:3:9.02:0,9,141	0/0:7,0:7:18.03:0,18,280	1/1:7,0:7:2.40:66,2,0	0/0:2,0:2:6.02:0,6,107	0/0:2,0:2:6.02:0,6,112	0/0:3,0:3:9.03:0,9,163	0/0:1,0:1:3.01:0,3,58	0/0:2,0:2:6.02:0,6,102	0/0:2,0:2:6.02:0,6,102	./.	1/1:0,2:2:4.81:29,5,0	0/0:1,0:1:0:0,0,0	1/1:0,2:2:1.25:3,1,0	0/0:4,0:4:12:0,12,162	0/0:6,0:6:15.05:0,15,257	0/0:5,0:5:14.99:0,15,140	0/0:2,0:2:6.02:0,6,103	./.	0/0:4,0:4:9.03:0,9,173	0/0:3,0:3:6.02:0,6,103	0/1:1,4:5:35.74:36,0,36	0/0:4,0:4:12.03:0,12,198	1/1:0,1:1:1.82:5,2,0
chr10	97911764	.	C	CT	336.70	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.511;DP=534;FS=0.000;HRun=9;HaplotypeScore=52.1272;InbreedingCoeff=0.9094;MQ=77.42;MQ0=0;MQRankSum=-1.112;QD=21.04;ReadPosRankSum=0.774;VQSLOD=3.9794;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:83.98:0,84,729	0/0:7,0:7:18:0,18,156	0/0:12,0:12:8.97:0,9,78	0/0:11,0:11:14.91:0,15,122	0/0:29,0:29:71.97:0,72,625	0/0:26,0:26:65.98:0,66,573	0/0:18,0:18:47.99:0,48,417	0/0:31,0:31:77.95:0,78,673	0/0:19,0:19:47.98:0,48,417	0/0:29,0:28:71.98:0,72,625	0/0:17,1:18:17.81:0,18,383	0/0:21,0:21:50.96:0,51,439	0/0:18,1:19:20.81:0,21,409	0/0:10,0:10:29.99:0,30,260	0/0:16,0:16:38.96:0,39,335	1/1:2,14:16:39.11:431,39,0	0/0:14,0:15:34.97:0,35,283	0/0:16,0:17:34.97:0,35,283	0/0:23,0:23:56.98:0,57,495	0/0:15,0:15:44.99:0,45,391	0/0:18,0:18:38.98:0,39,339	0/0:15,0:15:23.92:0,24,344	0/0:17,0:17:44.98:0,45,391	0/0:20,0:20:44.94:0,45,384	0/0:18,0:19:53.02:0,53,449	0/0:24,0:24:68.98:0,69,599	0/0:27,0:27:74.98:0,75,651	0/0:12,0:12:32.99:0,33,286
chr10	97913268	.	G	GA	736.72	PASS	AB=0.914;AC=8;AF=0.143;AN=56;BaseQRankSum=4.455;DP=505;FS=3.887;HRun=11;HaplotypeScore=72.9579;InbreedingCoeff=0.3714;MQ=55.82;MQ0=15;MQRankSum=-3.786;QD=6.35;ReadPosRankSum=-2.010;VQSLOD=1.6907;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:9,21:31:39.40:544,39,0	0/0:9,0:8:17.92:0,18,139	0/0:6,0:5:7.75:0,8,35	0/0:9,0:6:2.46:0,2,9	0/0:22,0:22:32.82:0,33,252	0/0:19,0:19:44.77:0,45,345	0/0:22,0:22:52.80:0,53,398	0/1:24,1:23:4.50:5,0,260	0/0:12,0:12:23.11:0,23,169	0/0:27,0:25:47.76:0,48,371	0/0:8,0:10:19.95:0,20,144	0/1:15,1:15:3.60:4,0,159	0/0:11,0:11:23.88:0,24,185	0/0:18,1:19:5.37:0,5,223	0/0:18,0:17:43.73:0,44,329	0/0:13,1:12:29.88:0,30,232	0/0:35,1:38:48.39:0,48,539	0/0:19,0:18:30.81:0,31,189	0/0:23,1:26:27.42:0,27,370	0/0:15,0:14:20.86:0,21,162	0/0:10,2:12:17.90:0,18,139	0/1:11,2:13:48.25:48,0,72	0/0:18,0:18:36.74:0,37,280	0/0:17,0:21:41.94:0,42,296	0/0:14,0:16:27.83:0,28,185	1/1:11,8:19:6:257,6,0	0/0:21,0:19:13.25:0,13,233	0/1:6,1:7:9.52:10,0,118
chr10	97913284	.	C	CA	2893.41	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-2.192;DP=531;FS=8.904;HRun=8;HaplotypeScore=62.9662;InbreedingCoeff=0.8844;MQ=58.69;MQ0=6;MQRankSum=-2.923;QD=20.23;ReadPosRankSum=-1.043;VQSLOD=2.9709;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,30:38:76.70:928,77,0	0/0:10,0:10:27.01:0,27,247	0/0:8,0:6:11.49:0,11,90	0/1:12,0:8:10.58:11,0,43	0/0:17,0:17:39:0,39,351	0/0:26,0:26:34.37:0,34,555	0/0:24,0:24:66.03:0,66,600	1/1:6,25:30:72.21:830,72,0	0/0:16,0:16:39.02:0,39,357	0/0:27,0:26:69.45:0,69,649	0/0:9,0:9:27.01:0,27,247	0/0:16,0:16:35.98:0,36,316	0/0:12,0:12:33.01:0,33,302	0/0:19,0:19:48.02:0,48,439	0/0:19,0:19:48.02:0,48,439	1/1:6,9:13:27.07:302,27,0	0/0:41,0:40:91.29:0,91,829	1/1:11,11:21:20.67:481,21,0	0/0:25,0:25:56.93:0,57,509	0/0:18,0:17:39:0,39,357	0/0:11,0:11:27.01:0,27,247	0/0:12,0:12:33.02:0,33,302	0/0:20,0:20:60.02:0,60,544	0/0:21,0:21:51.01:0,51,467	0/0:15,0:15:39.01:0,39,353	1/1:5,12:17:9.11:354,9,0	0/0:22,0:20:50.99:0,51,455	1/1:1,5:6:15.04:173,15,0
chr10	97913377	.	G	GA	402.70	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.572;DP=600;FS=1.620;HRun=9;HaplotypeScore=61.4252;InbreedingCoeff=0.5520;MQ=56.64;MQ0=16;MQRankSum=-0.875;QD=9.59;ReadPosRankSum=0.048;VQSLOD=2.0851;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:88.38:0,88,983	0/0:4,0:4:6:0,6,52	0/1:17,0:5:5.08:5,0,39	0/0:22,0:6:11.81:0,12,101	0/0:26,1:28:12.21:0,12,514	0/0:17,1:18:38.92:0,39,338	0/0:14,0:14:35.98:0,36,308	0/0:24,0:23:50.94:0,51,437	0/0:20,0:20:47.98:0,48,417	0/0:20,0:18:29.97:0,30,257	0/0:18,0:17:38.95:0,39,330	0/0:22,1:23:17.73:0,18,374	0/0:17,0:17:44.86:0,45,390	0/0:16,0:16:2.88:0,3,249	0/0:16,0:16:35.94:0,36,309	1/1:3,20:25:27.76:496,28,0	0/0:33,0:33:71.63:0,72,625	0/0:25,0:24:43.35:0,43,455	0/0:19,0:17:41.99:0,42,364	0/0:30,1:30:44.76:0,45,611	0/0:10,0:10:23.97:0,24,208	0/0:19,0:20:47.01:0,47,396	0/0:16,0:15:32.99:0,33,286	0/0:27,0:27:59.46:0,59,502	0/0:23,0:23:56.98:0,57,495	0/0:25,0:25:56.98:0,57,494	0/0:26,2:28:29.76:0,30,483	0/0:12,0:12:35.99:0,36,312
chr10	97914683	.	TCTTC	T	1846.35	PASS	AB=0.952;AC=17;AF=0.340;AN=50;BaseQRankSum=5.978;DP=735;FS=23.208;HRun=0;HaplotypeScore=116.9720;InbreedingCoeff=0.3417;MQ=66.76;MQ0=6;MQRankSum=0.330;QD=5.50;ReadPosRankSum=3.240;VQSLOD=0.7588;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:26:3:28,3,0	0/0:12,0:13:6.02:0,6,87	./.	./.	0/0:21,0:21:12.04:0,12,253	0/1:26,0:26:0.43:0,0,131	0/0:33,0:33:26.57:0,27,287	./.	0/0:16,0:24:14.98:0,15,164	0/0:26,0:26:21.07:0,21,465	0/0:15,0:15:3.48:0,3,60	0/0:34,1:35:11.67:0,12,1157	0/1:25,1:26:14.97:15,0,491	1/1:11,12:23:21.06:318,21,0	1/1:10,19:29:33.11:501,33,0	1/1:24,17:40:33.11:501,33,0	0/0:37,0:35:36.12:0,36,830	0/1:13,0:19:46.83:47,0,50	0/0:27,0:24:12.04:0,12,263	0/0:22,0:22:12.04:0,12,271	0/1:43,0:43:0.92:1,0,824	0/0:23,0:23:9.03:0,9,207	0/0:18,0:18:18.06:0,18,365	0/1:31,2:33:53.98:54,0,475	0/1:29,0:30:70.69:71,0,225	1/1:15,10:25:30.10:453,30,0	0/0:36,0:36:42.14:0,42,908	0/1:15,0:15:23.96:24,0,397
chr10	97916081	.	T	TA	5497.59	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-9.860;DP=633;FS=2.703;HRun=0;HaplotypeScore=58.9976;InbreedingCoeff=0.9996;MQ=81.88;MQ0=0;MQRankSum=-3.097;QD=45.06;ReadPosRankSum=-0.102;VQSLOD=4.8177;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:69.24:1103,69,0	0/0:14,0:14:42.14:0,42,587	0/0:18,0:18:51.15:0,51,681	0/0:15,0:15:42.13:0,42,559	0/0:42,0:42:99:0,123,1703	0/0:29,0:28:84.27:0,84,1158	0/0:12,0:12:36.12:0,36,504	1/1:0,22:22:66.20:1031,66,0	0/0:16,0:16:48.16:0,48,671	0/0:26,0:26:78.26:0,78,1091	0/0:32,0:32:96.32:0,96,1341	0/0:21,0:21:60.19:0,60,820	0/0:33,0:33:96.30:0,96,1324	0/0:25,0:25:72.23:0,72,986	0/0:36,0:36:99:0,108,1492	1/1:1,20:21:54.18:863,54,0	0/0:21,0:21:60.20:0,60,839	1/1:0,14:14:42.14:671,42,0	0/0:10,0:10:30.10:0,30,420	0/0:36,0:36:99:0,105,1466	0/0:16,0:16:48.16:0,48,670	0/0:20,0:20:60.19:0,60,823	0/0:20,0:20:60.20:0,60,839	0/0:12,0:12:36.12:0,36,504	0/0:18,0:18:54.18:0,54,754	1/1:1,30:31:51.35:1398,51,0	0/0:39,0:39:99:0,116,1578	1/1:0,9:9:27.09:431,27,0
chr10	97918517	.	CA	C	2362.67	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.988;DP=785;FS=1.468;HRun=5;HaplotypeScore=73.2351;InbreedingCoeff=0.9877;MQ=90.29;MQ0=0;MQRankSum=-4.383;QD=30.29;ReadPosRankSum=3.295;VQSLOD=4.3565;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,42:43:99:1361,120,0	0/0:13,0:13:36.12:0,36,492	0/0:33,0:33:64.43:0,64,1046	0/0:28,0:28:75.24:0,75,992	0/0:28,0:28:78.22:0,78,1019	0/0:28,0:28:69.23:0,69,944	0/0:36,0:36:99:0,102,1362	0/0:32,0:32:87.29:0,87,1190	0/0:28,0:28:81.25:0,81,1090	0/0:25,0:25:69.22:0,69,928	0/0:30,0:30:87.29:0,87,1190	0/0:26,0:26:75.25:0,75,1026	0/0:35,0:35:99:0,99,1354	0/0:24,0:24:66.22:0,66,903	0/0:39,0:39:99:0,111,1503	1/1:1,34:35:99:1123,99,0	0/0:18,0:18:48.14:0,48,639	0/0:6,0:6:18.05:0,18,233	0/0:19,0:19:51.14:0,51,678	0/0:39,0:39:99:0,108,1444	0/0:35,0:35:99:0,99,1322	0/0:29,0:29:84.25:0,84,1116	0/0:31,0:31:87.28:0,87,1174	0/0:22,0:22:66.15:0,66,864	0/0:22,0:22:63.19:0,63,843	0/0:28,0:28:84.28:0,84,1149	0/0:48,0:48:99:0,138,1838	0/0:5,0:5:15.05:0,15,205
chr10	97919838	.	A	AC	1313.62	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.604;DP=559;FS=2.335;HRun=4;HaplotypeScore=51.1809;InbreedingCoeff=0.9962;MQ=87.61;MQ0=0;MQRankSum=-4.807;QD=29.19;ReadPosRankSum=0.151;VQSLOD=3.1411;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:51.17:697,51,0	0/0:10,0:10:30.09:0,30,340	0/0:26,0:26:47.14:0,47,541	0/0:13,0:13:33.45:0,33,320	0/0:32,0:31:93.23:0,93,1032	0/0:24,0:24:69.20:0,69,782	0/0:13,0:13:39.09:0,39,429	0/0:28,0:28:75.20:0,75,844	0/0:14,0:14:39.11:0,39,442	0/0:33,0:33:99:0,99,1104	0/0:29,0:29:81.20:0,81,899	0/0:15,0:15:42.12:0,42,476	0/0:23,0:23:63.18:0,63,714	0/0:17,0:17:51.12:0,51,561	0/0:20,0:20:57.13:0,57,627	1/1:3,23:26:54.18:739,54,0	0/0:17,0:17:45.11:0,45,499	0/0:8,0:8:24.07:0,24,271	0/0:19,0:19:51.12:0,51,555	0/0:28,0:28:84.21:0,84,934	0/0:11,0:11:33.08:0,33,364	0/0:14,0:14:42.12:0,42,476	0/0:29,0:29:84.22:0,84,942	0/0:8,0:8:24.06:0,24,264	0/0:19,0:19:57.16:0,57,647	0/0:31,0:31:87.24:0,87,980	0/0:25,0:24:75.20:0,75,841	0/0:8,0:8:24.07:0,24,272
chr10	97922885	.	C	CT	701.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.486;DP=693;FS=0.000;HRun=8;HaplotypeScore=65.7716;InbreedingCoeff=0.9911;MQ=81.46;MQ0=0;MQRankSum=-2.687;QD=26.98;ReadPosRankSum=2.459;VQSLOD=4.3000;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,934	0/0:7,0:7:17.98:0,18,158	0/0:25,0:24:49.82:0,50,499	0/0:18,0:18:36.01:0,36,328	0/0:33,0:33:99:0,99,901	0/0:30,0:30:87.05:0,87,796	0/0:29,0:30:84.03:0,84,764	0/0:25,0:25:63.02:0,63,576	0/0:17,0:17:48.03:0,48,439	0/0:21,0:21:54.02:0,54,494	0/0:21,0:21:51.02:0,51,467	0/0:25,0:25:62.99:0,63,569	0/0:23,0:23:60.02:0,60,549	0/0:30,0:30:81.03:0,81,741	0/0:36,0:36:96.04:0,96,879	1/1:2,24:26:69.21:796,69,0	0/0:30,0:30:78.02:0,78,710	0/0:21,0:21:50.98:0,51,460	0/0:14,0:14:36.02:0,36,330	0/0:36,0:36:96.01:0,96,871	0/0:34,0:34:99:0,99,906	0/0:20,0:20:57.01:0,57,516	0/0:18,0:18:54.03:0,54,494	0/0:23,0:23:51.02:0,51,467	0/0:17,0:17:47.98:0,48,432	0/0:28,0:28:78.02:0,78,706	0/0:37,0:36:98.99:0,99,897	0/0:13,0:13:30.01:0,30,275
chr10	97924365	.	AT	A	791.11	PASS	AB=0.900;AC=5;AF=0.089;AN=56;BaseQRankSum=6.189;DP=487;FS=0.606;HRun=10;HaplotypeScore=57.1964;InbreedingCoeff=0.8040;MQ=71.69;MQ0=1;MQRankSum=-1.179;QD=13.41;ReadPosRankSum=1.408;VQSLOD=3.4437;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:20:50.98:443,51,0	0/0:16,0:16:39.11:0,39,431	0/0:15,0:14:36.16:0,36,320	0/1:15,1:16:2.56:3,0,128	0/0:19,0:19:45.12:0,45,498	0/0:17,0:17:45.12:0,45,498	0/0:6,0:6:17.99:0,18,177	0/0:5,1:34:60.40:0,60,459	0/0:18,0:18:51.13:0,51,556	0/0:19,0:19:51.13:0,51,558	0/0:15,0:15:39.11:0,39,431	0/0:14,1:15:10.03:0,10,330	0/0:13,0:13:30.07:0,30,325	0/0:19,0:19:54.08:0,54,567	0/0:15,1:16:22.08:0,22,464	1/1:1,20:21:53.99:469,54,0	0/0:18,0:18:48.13:0,48,531	0/0:22,0:22:63.17:0,63,697	0/0:17,1:18:13.04:0,13,365	0/0:22,0:22:63.17:0,63,697	0/0:7,0:6:15.04:0,15,166	0/0:11,0:11:33.03:0,33,342	0/0:24,0:24:69.18:0,69,756	0/0:10,0:11:29.90:0,30,303	0/0:12,0:12:33.08:0,33,358	0/0:24,0:23:60.16:0,60,664	0/0:29,0:28:84.21:0,84,920	0/0:1,0:6:14.37:0,14,90
chr10	97924533	.	ATGTGTGTGTGCGTGTGTGTG	A	224.74	PASS	AB=0.576;AC=1;AF=0.018;AN=56;BaseQRankSum=3.308;DP=599;FS=3.229;HRun=0;HaplotypeScore=279.0909;InbreedingCoeff=0.0327;MQ=61.00;MQ0=12;MQRankSum=-2.209;QD=11.83;ReadPosRankSum=0.013;VQSLOD=2.4167;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:53.89:0,54,3060	0/0:10,0:10:23.98:0,24,987	0/0:34,0:15:9.51:0,10,292	0/0:32,0:10:19.19:0,19,408	0/0:24,0:24:62.99:0,63,3335	0/0:27,0:27:63.04:0,63,2769	0/0:18,0:17:37:0,37,2111	0/0:26,0:26:42.92:0,43,1725	0/0:23,0:23:54.02:0,54,2375	0/0:22,0:22:51.01:0,51,2653	0/0:13,0:13:30.06:0,30,1506	0/0:24,0:23:66:0,66,3088	0/0:7,0:7:18.02:0,18,642	0/0:21,0:21:48.09:0,48,3115	0/0:22,0:22:57.12:0,57,3738	0/1:5,13:19:14.97:299,0,15	0/0:17,0:17:44.80:0,45,2082	0/0:18,0:16:35.22:0,35,1433	0/0:18,0:17:41.94:0,42,952	0/0:21,0:20:44.97:0,45,1362	0/0:36,0:35:77.64:0,78,3107	0/0:17,0:17:29.83:0,30,807	0/0:17,0:17:38.98:0,39,2114	0/0:22,0:22:60.14:0,60,3915	0/0:29,0:29:77.88:0,78,3447	0/0:21,0:20:54.07:0,54,2131	0/0:19,0:19:48.08:0,48,2989	0/0:13,0:13:28.91:0,29,1312
chr10	97924544	.	CGT	C	591.76	PASS	AB=0.938;AC=20;AF=0.385;AN=52;BaseQRankSum=5.440;DP=599;FS=0.000;HRun=0;HaplotypeScore=82.6221;InbreedingCoeff=-0.3450;MQ=57.42;MQ0=17;MQRankSum=-0.462;QD=1.54;ReadPosRankSum=0.000;VQSLOD=1.4949;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:6.73:0,7,374	0/0:10,0:10:8.37:0,8,76	./.	./.	0/1:23,1:24:2.74:3,0,344	0/1:28,1:29:60.98:61,0,220	0/0:16,0:15:12.13:0,12,258	0/0:27,0:27:10.99:0,11,92	0/1:19,1:22:99:100,0,118	0/1:23,0:21:18.91:19,0,147	0/0:13,0:12:12.03:0,12,158	0/1:24,4:27:87.26:87,0,270	0/1:9,0:9:17.21:17,0,141	0/1:18,2:20:48.28:48,0,261	0/1:22,0:22:38.57:39,0,423	1/1:15,0:15:5.68:28,6,0	0/1:16,2:18:8.67:9,0,282	1/1:15,2:16:10.86:108,11,0	0/1:22,0:21:22.19:22,0,50	0/1:22,0:21:14.33:14,0,46	0/1:27,1:28:28.88:29,0,130	0/0:12,0:12:6.02:0,6,89	0/1:14,1:14:23.01:23,0,183	0/1:26,1:26:44.92:45,0,553	0/0:27,0:28:22.14:0,22,292	0/1:15,0:20:23.01:63,0,23	0/1:18,2:20:31.39:31,0,340	0/0:11,0:14:9:0,9,88
chr10	97924866	.	CG	C	846.19	PASS	AB=0.930;AC=8;AF=0.143;AN=56;BaseQRankSum=8.104;DP=732;FS=0.499;HRun=9;HaplotypeScore=93.1732;InbreedingCoeff=0.4350;MQ=68.72;MQ0=1;MQRankSum=0.278;QD=7.42;ReadPosRankSum=-0.036;VQSLOD=1.7596;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,43:48:67.34:871,67,0	0/0:16,0:16:39.08:0,39,430	0/1:7,1:9:15.40:15,0,92	0/1:14,0:13:9.81:10,0,57	0/0:23,0:23:42.08:0,42,469	0/0:24,0:24:42.10:0,42,466	0/0:39,0:41:99:0,108,1215	0/0:27,0:27:51.05:0,51,520	0/0:36,0:36:74.88:0,75,841	0/0:19,0:19:39.11:0,39,442	0/1:9,1:10:0.39:0,0,239	0/0:42,1:44:80.64:0,81,1127	0/0:30,0:30:65.53:0,66,749	0/0:35,0:35:69.20:0,69,788	0/0:44,0:44:99:0,108,1228	1/1:2,0:22:5.05:73,5,0	0/0:23,0:23:63.19:0,63,727	0/0:5,0:20:46.10:0,46,300	0/0:16,1:17:8.61:0,9,331	0/0:31,0:33:74.89:0,75,846	0/0:40,2:42:45.24:0,45,987	0/0:20,0:20:48.13:0,48,545	0/0:21,0:21:42.10:0,42,464	0/0:33,0:33:75.19:0,75,845	0/0:21,1:22:23.69:0,24,526	0/0:16,0:27:28.55:0,29,152	0/0:21,0:21:32.72:0,33,370	0/1:9,1:10:3.36:3,0,218
chr10	97925009	.	C	CAGAT	676.36	PASS	AB=0.630;AC=1;AF=0.020;AN=50;BaseQRankSum=3.377;DP=788;FS=0.000;HRun=0;HaplotypeScore=88.3645;InbreedingCoeff=-0.0173;MQ=42.43;MQ0=207;MQRankSum=0.440;QD=23.32;ReadPosRankSum=-0.159;VQSLOD=2.9691;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:18:23.83:0,24,401	0/0:8,0:3:9.03:0,9,163	./.	./.	0/0:20,0:16:36.12:0,36,654	0/0:19,0:13:15.05:0,15,273	0/0:32,0:14:24.04:0,24,436	./.	0/0:51,0:49:60.21:0,60,1085	0/0:12,0:8:18.05:0,18,295	0/0:12,0:9:16.30:0,16,276	0/0:36,0:34:72.25:0,72,1303	0/0:44,0:37:57.20:0,57,1036	0/0:35,0:33:42.11:0,42,733	0/0:50,0:47:99:0,99,1712	0/1:12,17:21:20.96:750,0,21	0/0:34,0:28:49.69:0,50,844	0/0:11,0:10:12.04:0,12,218	0/0:13,0:6:12.93:0,13,220	0/0:18,0:11:24.06:0,24,436	0/0:64,0:39:53.79:0,54,960	0/0:14,0:6:12.04:0,12,204	0/0:15,0:8:18.06:0,18,313	0/0:41,0:34:69.24:0,69,1247	0/0:24,0:10:18.06:0,18,327	0/0:27,0:18:39.13:0,39,707	0/0:31,0:29:51.17:0,51,928	0/0:13,0:9:21.07:0,21,382
chr10	97925294	.	GT	G	1213.60	PASS	AB=0.900;AC=11;AF=0.196;AN=56;BaseQRankSum=7.094;DP=550;FS=5.728;HRun=10;HaplotypeScore=75.0222;InbreedingCoeff=0.8249;MQ=83.52;MQ0=1;MQRankSum=0.638;QD=10.28;ReadPosRankSum=0.349;VQSLOD=2.7913;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:27:42.96:127,43,0	0/0:12,0:12:30.04:0,30,305	0/0:55,0:33:29.30:0,29,424	0/0:28,0:23:22.45:0,22,172	0/0:27,0:29:69:0,69,728	0/0:17,0:17:36.01:0,36,367	0/0:11,0:11:27.02:0,27,284	1/1:10,19:30:58.66:458,59,0	0/0:13,0:14:29.89:0,30,295	0/0:24,0:26:62.78:0,63,620	0/0:24,1:26:42.91:0,43,654	0/0:12,1:13:3.90:0,4,248	0/1:16,2:18:13.09:13,0,291	0/0:12,0:12:26.96:0,27,273	0/0:13,0:14:32.76:0,33,304	0/0:15,0:15:24.55:0,25,95	0/0:15,0:16:38.92:0,39,403	1/1:4,8:12:23.99:207,24,0	0/0:16,0:16:36.04:0,36,363	0/0:26,1:27:40.08:0,40,643	0/0:9,0:9:15.04:0,15,166	0/0:10,0:10:21.88:0,22,205	0/0:11,0:11:24.93:0,25,251	0/0:6,0:6:12.03:0,12,133	0/0:28,0:28:69.08:0,69,702	1/1:7,22:29:65.51:528,66,0	0/0:35,1:36:49.03:0,49,729	1/1:0,2:2:6:52,6,0
chr10	97927305	.	CT	C	459.17	PASS	AB=0.910;AC=6;AF=0.107;AN=56;BaseQRankSum=3.372;DP=595;FS=0.556;HRun=12;HaplotypeScore=70.9140;InbreedingCoeff=0.2414;MQ=63.81;MQ0=13;MQRankSum=1.318;QD=4.14;ReadPosRankSum=2.400;VQSLOD=0.7559;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,23:28:40.33:486,40,0	0/0:10,1:11:6.82:0,7,250	0/1:11,1:10:11.21:11,0,71	0/1:12,0:9:8.08:8,0,56	0/0:22,1:22:17.08:0,17,341	0/0:16,0:17:38.86:0,39,360	0/0:20,0:19:38.97:0,39,361	0/0:19,0:29:42.62:0,43,238	0/0:18,0:18:22.13:0,22,398	0/1:27,3:31:2.49:2,0,491	0/0:18,1:19:24.77:0,25,405	0/0:17,1:19:18.68:0,19,357	0/0:14,0:16:32.79:0,33,301	0/0:24,3:26:7.64:0,8,441	0/0:9,1:11:3.77:0,4,203	0/0:2,0:19:22.76:0,23,115	0/0:44,3:44:41.42:0,41,934	0/0:8,0:19:28.57:0,29,157	0/0:30,0:29:34.67:0,35,490	0/0:19,1:20:15.83:0,16,335	0/0:13,0:11:21.01:0,21,203	0/0:20,1:21:18.40:0,18,333	0/0:13,0:14:32.89:0,33,313	0/0:32,1:34:64.05:0,64,827	0/0:23,2:25:39.89:0,40,586	0/0:19,0:20:45.76:0,46,274	0/1:19,6:24:70.74:71,0,291	0/0:2,0:7:19.89:0,20,101
chr10	97927317	.	T	TG	460.96	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.716;DP=560;FS=0.719;HRun=2;HaplotypeScore=68.4576;InbreedingCoeff=0.8314;MQ=55.19;MQ0=18;MQRankSum=1.898;QD=13.56;ReadPosRankSum=0.282;VQSLOD=2.6497;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:29:82.42:0,82,521	0/0:15,0:15:38.97:0,39,399	0/0:8,0:6:9.22:0,9,78	0/0:8,0:5:8.29:0,8,49	0/0:24,0:23:41.28:0,41,464	0/0:18,0:18:43.54:0,44,448	0/0:14,0:13:28.26:0,28,317	0/0:22,0:21:47.29:0,47,322	0/0:20,0:20:50.97:0,51,547	0/0:28,0:28:76.38:0,76,803	0/0:18,0:18:47.84:0,48,508	0/0:20,0:20:42.98:0,43,492	0/0:17,0:15:32.29:0,32,372	0/0:29,0:28:65.93:0,66,688	0/0:13,0:12:29.97:0,30,313	0/0:18,0:18:25.87:0,26,133	0/0:46,0:43:99:0,110,1222	1/1:14,0:12:2.79:21,3,0	0/0:22,0:20:47.38:0,47,573	0/0:19,0:19:47.74:0,48,485	0/0:9,0:7:18.05:0,18,210	0/0:16,0:15:41.89:0,42,433	0/0:14,0:13:31.64:0,32,358	0/0:33,0:33:95.76:0,96,1071	0/0:27,0:26:75.02:0,75,846	1/1:3,17:20:48.03:548,48,0	0/0:27,0:26:68.73:0,69,648	0/0:9,0:7:18.79:0,19,80
chr10	97927445	.	ACCACACTGAGCAG	A	768.20	PASS	AB=0.955;AC=3;AF=0.054;AN=56;BaseQRankSum=4.575;DP=490;FS=0.000;HRun=0;HaplotypeScore=173.4383;InbreedingCoeff=0.6370;MQ=89.64;MQ0=0;MQRankSum=-4.820;QD=23.28;ReadPosRankSum=2.180;VQSLOD=2.5816;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:66.21:0,66,3917	0/0:15,0:15:42.14:0,42,2584	0/0:25,0:25:60.18:0,60,2549	0/0:21,0:21:43.01:0,43,1747	0/0:14,0:14:33.10:0,33,1969	0/0:11,0:11:30.10:0,30,1932	0/0:13,0:13:36.12:0,36,2214	0/0:28,0:28:69.24:0,69,4218	0/1:20,1:21:59.06:59,0,3057	0/0:19,0:19:41.73:0,42,2405	0/0:10,0:10:24.08:0,24,1391	0/0:21,0:21:63.22:0,63,3915	0/0:15,0:15:45.15:0,45,2858	0/0:26,0:26:66.23:0,66,4110	0/0:18,0:18:54.19:0,54,3422	1/1:3,9:12:21.07:814,21,0	0/0:23,0:23:66.23:0,66,4156	0/0:14,0:14:36.12:0,36,2306	0/0:11,0:11:33.11:0,33,1841	0/0:15,0:15:42.13:0,42,2552	0/0:37,0:37:96.33:0,96,5722	0/0:19,0:19:48.14:0,48,2667	0/0:11,0:11:33.11:0,33,1818	0/0:17,0:17:45.15:0,45,2667	0/0:8,0:8:18.06:0,18,899	0/0:17,0:17:51.18:0,51,3158	0/0:15,0:14:42.14:0,42,2666	0/0:7,0:7:21.07:0,21,1361
chr10	97930183	.	ACATG	A	1827.14	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.293;DP=732;FS=0.000;HRun=0;HaplotypeScore=116.7290;InbreedingCoeff=0.9838;MQ=70.12;MQ0=0;MQRankSum=-7.611;QD=57.10;ReadPosRankSum=-2.362;VQSLOD=4.3739;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.32:0,96,2661	0/0:11,0:11:33.11:0,33,948	0/0:21,0:21:63.19:0,63,1589	0/0:25,0:24:72.21:0,72,1858	0/0:26,0:26:78.25:0,78,2170	0/0:25,0:25:72.23:0,72,2020	0/0:19,0:19:57.14:0,57,1424	1/1:0,28:28:81.28:1692,81,0	0/0:29,0:29:87.30:0,87,2521	0/0:27,0:27:81.27:0,81,2272	0/0:26,0:26:78.27:0,78,2171	0/0:25,0:25:72.25:0,72,2086	0/0:37,0:37:99:0,111,3120	0/0:27,0:27:81.26:0,81,2284	0/0:41,0:41:99:0,123,3440	0/0:35,0:35:99:0,105,3024	0/0:19,0:19:54.19:0,54,1564	0/0:33,0:33:99:0,99,2735	0/0:22,0:22:60.21:0,60,1689	0/0:26,0:26:78.27:0,78,2231	0/0:39,0:39:99:0,114,3261	0/0:25,0:25:75.26:0,75,2147	0/0:19,0:19:57.20:0,57,1611	0/0:19,0:19:57.18:0,57,1549	0/0:29,0:29:87.28:0,87,2459	0/0:32,0:32:96.32:0,96,2723	0/0:31,0:31:90.31:0,90,2606	1/1:0,4:4:12.04:252,12,0
chr10	97932731	.	TAC	T	325.39	PASS	AB=0.939;AC=18;AF=0.346;AN=52;BaseQRankSum=3.461;DP=671;FS=6.289;HRun=0;HaplotypeScore=76.5981;InbreedingCoeff=-0.1335;MQ=62.68;MQ0=13;MQRankSum=-0.401;QD=0.97;ReadPosRankSum=-0.094;VQSLOD=0.9199;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:24.01:0,24,260	0/0:6,0:6:3.01:0,3,44	./.	./.	0/0:20,3:23:15.05:0,15,208	0/0:25,0:24:18.03:0,18,219	0/1:24,1:26:60.83:61,0,110	0/1:25,0:25:0:0,0,0	0/0:16,0:16:6.02:0,6,87	0/1:26,1:29:37.77:38,0,146	0/0:18,0:18:8.96:0,9,101	0/0:19,0:19:5.80:0,6,69	0/1:18,4:21:35.72:52,0,36	0/1:20,2:22:26.21:26,0,38	0/1:25,1:26:38.45:38,0,139	0/1:21,1:25:57.57:58,0,136	0/0:15,0:15:9.03:0,9,133	1/1:10,0:12:2.59:14,3,0	0/0:15,0:15:3.01:0,3,44	0/1:25,0:26:19.96:20,0,38	0/0:36,0:36:15.05:0,15,213	0/1:19,3:22:20.49:20,0,115	0/1:13,1:14:23.23:23,0,59	0/1:25,0:25:20.20:20,0,121	0/1:24,1:31:32.95:33,0,184	1/1:15,0:16:3.31:15,3,0	0/0:23,0:24:6.87:0,7,182	1/1:11,0:16:11.36:56,11,0
chr10	97933475	.	T	TTTTTTTG	577.32	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.007;DP=649;FS=3.325;HRun=0;HaplotypeScore=141.9135;InbreedingCoeff=0.9903;MQ=73.61;MQ0=0;MQRankSum=-3.179;QD=38.49;ReadPosRankSum=1.374;VQSLOD=3.5066;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.15:0,63,1152	0/0:12,0:12:36.11:0,36,736	0/0:20,0:15:42.01:0,42,609	0/0:23,0:22:28.19:0,28,549	0/0:26,0:26:60.18:0,60,1184	0/0:29,0:29:84.25:0,84,1790	0/0:17,0:17:48.13:0,48,931	0/0:40,0:40:99:0,105,1812	0/0:25,0:25:72.23:0,72,1542	0/0:23,0:23:60.18:0,60,1253	0/0:14,0:14:36.10:0,36,707	0/0:21,0:21:57.13:0,57,1145	0/0:26,0:26:72.21:0,72,1428	0/0:27,0:27:78.10:0,78,1475	0/0:20,0:20:48.11:0,48,769	0/0:20,0:20:57.17:0,57,1144	0/0:20,0:20:57.09:0,57,1047	1/1:1,13:15:18.06:668,18,0	0/0:21,0:20:54.12:0,54,874	0/0:33,0:33:93.29:0,93,2019	0/0:23,0:23:66.20:0,66,1347	0/0:24,0:24:66.19:0,66,1340	0/0:33,0:33:87.27:0,87,1892	0/0:28,0:28:78.20:0,78,1642	0/0:19,0:19:45.10:0,45,820	0/0:24,0:24:63.19:0,63,1342	0/0:31,0:31:87.25:0,87,1695	0/0:10,0:10:30.10:0,30,721
chr10	97933633	.	AGTGT	A	510.42	PASS	AB=0.885;AC=12;AF=0.240;AN=50;BaseQRankSum=3.367;DP=648;FS=0.000;HRun=0;HaplotypeScore=99.2152;InbreedingCoeff=0.0126;MQ=81.77;MQ0=20;MQRankSum=-0.852;QD=2.23;ReadPosRankSum=-0.632;VQSLOD=1.4161;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:2.97:0,3,21	0/0:7,0:7:9.03:0,9,134	./.	./.	0/1:16,1:17:31.64:32,0,134	0/0:18,0:18:14.99:0,15,167	0/1:21,0:22:26.36:27,0,26	0/0:33,0:33:12.03:0,12,53	0/0:6,0:15:9.01:0,9,129	0/0:23,0:22:18.02:0,18,245	0/0:7,0:8:8.75:0,9,86	0/0:22,0:22:29.83:0,30,397	0/0:17,0:17:15.45:0,15,266	0/1:15,2:19:86.21:86,0,90	0/0:19,0:19:18.03:0,18,276	0/1:12,0:15:19.02:59,0,19	0/1:17,5:22:39.29:100,0,39	0/1:22,0:25:13.67:71,0,14	1/1:19,1:18:3.01:46,3,0	0/1:17,0:16:15.35:41,0,15	0/1:43,8:49:36.61:37,0,86	0/0:17,0:16:9:0,9,119	0/0:19,0:19:24.53:0,25,385	0/0:19,0:21:14.77:0,15,202	0/0:22,0:23:38.81:0,39,547	./.	1/1:15,0:18:14.77:160,15,0	0/0:6,0:6:5.99:0,6,48
chr10	97934417	.	TTA	T	73.15	PASS	AC=6;AF=0.375;AN=16;BaseQRankSum=0.811;DP=133;FS=0.000;HRun=0;HaplotypeScore=16.0673;MQ=82.38;MQ0=0;MQRankSum=-0.312;QD=2.81;ReadPosRankSum=1.200;VQSLOD=0.9491;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:3,0:3:3.01:0,3,45	./.	./.	./.	1/1:6,1:7:3.01:33,3,0	./.	./.	./.	./.	./.	0/0:5,0:5:3.01:0,3,42	./.	./.	./.	./.	1/1:8,1:12:8.69:61,9,0	0/0:7,0:8:6.01:0,6,65	./.	./.	./.	./.	./.	./.	0/0:5,0:5:3.01:0,3,43	./.	1/1:5,2:7:6.02:67,6,0	0/0:7,0:7:3.48:0,3,41
chr10	97938096	.	TACAC	T	170.14	PASS	AB=0.917;AC=9;AF=0.173;AN=52;BaseQRankSum=2.844;DP=532;FS=0.000;HRun=0;HaplotypeScore=88.9540;InbreedingCoeff=0.3562;MQ=55.23;MQ0=21;MQRankSum=-1.769;QD=1.43;ReadPosRankSum=-1.673;VQSLOD=1.4260;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:19:6.27:0,6,46	0/0:5,0:5:12.04:0,12,241	./.	./.	0/0:16,0:15:17.42:0,17,341	1/1:11,15:26:5.21:93,5,0	0/1:28,0:27:9.59:10,0,299	0/0:21,0:18:2.80:0,3,13	0/0:17,0:17:24.05:0,24,352	0/0:11,0:10:5.12:0,5,98	0/0:24,0:24:24.43:0,24,368	0/0:23,0:23:33.13:0,33,548	0/0:21,0:20:22.45:0,22,412	0/1:9,1:12:31.65:32,0,183	0/0:18,0:18:24.08:0,24,518	1/1:10,5:14:6.49:94,6,0	0/0:13,0:15:16.29:0,16,253	0/0:26,0:26:44.95:0,45,738	0/0:20,0:17:8.39:0,8,131	0/0:9,0:10:20.29:0,20,348	0/0:35,0:32:36.46:0,36,558	0/0:11,0:13:3.88:0,4,132	0/0:10,0:10:6:0,6,85	0/0:25,0:25:44.27:0,44,736	0/0:19,0:18:18.23:0,18,411	0/1:19,0:20:10.61:45,0,11	0/0:8,0:7:11.99:0,12,158	1/1:17,0:18:3:28,3,0
chr10	97938385	.	TACACACACACACAC	T	537.10	PASS	AB=0.714;AC=3;AF=0.054;AN=56;BaseQRankSum=5.264;DP=427;FS=3.129;HRun=0;HaplotypeScore=144.9418;InbreedingCoeff=0.4108;MQ=53.69;MQ0=13;MQRankSum=-5.130;QD=10.74;ReadPosRankSum=-0.713;VQSLOD=2.7000;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,15:29:15.05:590,15,0	0/0:10,0:10:27.09:0,27,1745	0/0:15,0:3:3.01:0,3,101	0/0:8,0:2:3.01:0,3,39	0/0:12,0:14:23.39:0,23,1444	0/0:23,0:22:39.58:0,40,2299	0/0:12,0:11:18.06:0,18,1141	0/0:29,0:25:33.10:0,33,1502	0/0:10,0:10:27.09:0,27,1549	0/0:11,0:11:21.54:0,22,1183	0/0:15,0:16:30.57:0,31,1720	0/0:14,0:14:27.09:0,27,1642	0/0:9,0:9:9.03:0,9,537	0/0:12,0:12:21.07:0,21,1224	0/0:10,0:10:21.07:0,21,988	0/0:12,0:17:24.08:0,24,1034	0/0:20,0:19:35.82:0,36,1985	0/0:3,0:2:4.77:0,5,24	0/0:23,0:23:23.43:0,23,862	0/0:16,0:17:36.12:0,36,2076	0/0:13,0:13:24.06:0,24,1218	0/0:11,0:12:15.05:0,15,883	0/0:12,0:12:9.03:0,9,483	0/0:13,0:12:27.09:0,27,1543	0/0:21,0:23:39.13:0,39,2236	0/1:12,0:20:48.69:49,0,245	0/0:15,0:15:30.10:0,30,1698	0/0:9,0:13:12.04:0,12,625
chr10	97939042	.	CT	C	1164.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.266;DP=643;FS=1.493;HRun=1;HaplotypeScore=58.6902;InbreedingCoeff=0.9973;MQ=82.95;MQ0=0;MQRankSum=-1.174;QD=37.55;ReadPosRankSum=1.927;VQSLOD=4.1201;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.26:0,75,1196	0/0:13,0:13:39.13:0,39,621	0/0:24,0:24:71.27:0,71,1109	0/0:12,0:12:33.11:0,33,519	0/0:25,0:25:75.26:0,75,1195	0/0:24,0:24:72.25:0,72,1145	0/0:21,0:21:60.20:0,60,958	0/0:37,0:37:99:0,111,1731	0/0:29,0:29:87.28:0,87,1368	0/0:26,0:26:78.26:0,78,1227	0/0:11,0:11:33.11:0,33,528	0/0:19,0:19:57.16:0,57,843	0/0:33,0:33:99:0,99,1530	0/0:27,0:27:81.28:0,81,1295	0/0:34,0:34:99:0,102,1581	1/1:0,31:31:90.30:1259,90,0	0/0:21,0:21:63.21:0,63,1006	0/0:21,0:21:60.20:0,60,951	0/0:15,0:15:45.15:0,45,720	0/0:16,0:16:45.15:0,45,719	0/0:28,0:28:81.28:0,81,1295	0/0:30,0:30:90.31:0,90,1435	0/0:19,0:19:57.16:0,57,862	0/0:22,0:22:66.23:0,66,1053	0/0:13,0:13:39.13:0,39,624	0/0:21,0:21:63.21:0,63,988	0/0:37,0:37:99:0,111,1750	0/0:8,0:8:24.08:0,24,384
chr10	97939599	.	AT	A	1596.81	PASS	AB=0.933;AC=9;AF=0.161;AN=56;BaseQRankSum=7.572;DP=368;FS=4.942;HRun=9;HaplotypeScore=39.8040;InbreedingCoeff=0.6304;MQ=68.64;MQ0=0;MQRankSum=-0.167;QD=16.81;ReadPosRankSum=2.579;VQSLOD=3.4404;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:93.04:851,93,0	0/0:6,0:6:18.05:0,18,208	0/0:6,0:6:12.03:0,12,131	0/1:4,0:4:10.45:10,0,33	0/0:11,0:11:33.09:0,33,375	0/0:19,0:19:48.14:0,48,554	0/0:22,0:22:57.17:0,57,658	0/0:3,0:23:56.98:0,57,301	0/0:8,0:8:24.07:0,24,277	0/0:12,0:12:33.10:0,33,381	0/0:10,0:10:27.08:0,27,312	0/0:7,0:7:21.05:0,21,234	0/0:5,0:5:12.02:0,12,128	0/0:14,0:14:42.12:0,42,484	0/0:10,0:10:24.07:0,24,277	0/0:0,0:7:19.89:0,20,101	0/0:30,0:30:87.25:0,87,994	1/1:2,19:21:54.03:494,54,0	0/0:19,0:19:51.12:0,51,575	0/0:4,0:4:9.03:0,9,104	0/0:20,0:20:45.13:0,45,519	0/1:8,1:9:3.40:3,0,218	0/1:8,1:9:0.39:0,0,250	0/0:13,0:13:36.09:0,36,405	0/0:11,0:11:27.08:0,27,312	1/1:3,14:17:42.01:384,42,0	0/0:11,0:11:27.08:0,27,311	0/0:3,0:5:2.84:0,3,14
chr10	97942505	.	CA	C	278.30	PASS	AB=0.938;AC=6;AF=0.107;AN=56;BaseQRankSum=8.444;DP=422;FS=0.607;HRun=10;HaplotypeScore=44.0594;InbreedingCoeff=0.5073;MQ=71.78;MQ0=20;MQRankSum=-1.450;QD=4.72;ReadPosRankSum=-0.861;VQSLOD=-0.1130;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:57.15:0,57,630	0/0:11,0:11:30.04:0,30,311	0/0:23,0:8:3.06:0,3,27	0/0:28,0:13:10.99:0,11,139	0/0:15,1:16:16.07:0,16,405	0/0:15,0:15:36.07:0,36,386	0/0:13,0:12:24.01:0,24,244	0/1:18,0:16:7.75:8,0,87	0/0:8,0:7:18.05:0,18,199	0/0:11,0:10:20.85:0,21,212	0/0:15,0:16:44.95:0,45,479	0/1:6,1:7:11.01:11,0,117	0/0:14,0:14:39.08:0,39,415	0/0:12,0:11:18.05:0,18,197	0/0:12,0:12:33.08:0,33,358	0/0:15,0:15:39.09:0,39,422	0/0:27,0:24:66.18:0,66,730	1/1:1,13:13:35.99:312,36,0	0/0:10,1:10:0.99:0,1,217	0/0:11,0:10:24.06:0,24,262	0/0:12,0:11:30.06:0,30,321	0/0:7,0:7:18.05:0,18,198	0/0:15,0:15:42.11:0,42,464	0/0:7,0:7:18.05:0,18,199	0/0:13,0:13:39.09:0,39,416	0/0:21,1:22:19.16:0,19,408	0/0:19,0:19:42.11:0,42,464	1/1:20,0:20:8.31:72,8,0
chr10	97942515	.	AT	A	786.31	PASS	AB=0.981;AC=6;AF=0.107;AN=56;BaseQRankSum=8.264;DP=412;FS=0.000;HRun=7;HaplotypeScore=43.6343;InbreedingCoeff=0.6429;MQ=76.38;MQ0=8;MQRankSum=-2.527;QD=10.35;ReadPosRankSum=-0.910;VQSLOD=0.6637;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.17:0,60,720	0/0:11,0:11:24.96:0,25,295	0/1:24,1:12:34.60:35,0,56	0/0:22,1:13:1.63:0,2,39	0/0:15,0:15:41.53:0,42,496	0/0:14,0:14:36.10:0,36,427	0/0:13,0:13:32.95:0,33,326	1/1:4,12:16:35.93:321,36,0	0/0:7,0:6:18.06:0,18,220	0/0:11,0:11:27.06:0,27,299	0/0:16,0:16:48.12:0,48,562	0/0:9,0:9:21.86:0,22,216	0/0:14,0:14:36.10:0,36,427	0/0:8,0:7:18.06:0,18,218	0/0:16,0:16:47.99:0,48,501	0/0:15,0:15:42.10:0,42,478	0/0:27,0:25:75.19:0,75,875	0/1:15,0:15:2.89:30,0,3	0/0:12,0:11:20.81:0,21,270	0/0:9,0:9:27.04:0,27,314	0/0:13,0:12:33.06:0,33,375	0/0:7,0:7:20.43:0,20,226	0/0:16,0:16:45.13:0,45,539	0/0:7,0:7:21.05:0,21,244	0/0:18,0:18:48.08:0,48,524	0/0:19,0:19:45.93:0,46,487	0/0:14,0:14:42.08:0,42,496	1/1:1,19:20:54.07:536,54,0
chr10	97942625	.	TAC	T	347.56	PASS	AB=0.936;AC=13;AF=0.260;AN=50;BaseQRankSum=0.802;DP=438;FS=3.496;HRun=0;HaplotypeScore=51.0586;InbreedingCoeff=-0.1114;MQ=66.81;MQ0=26;MQRankSum=-0.184;QD=2.06;ReadPosRankSum=2.007;VQSLOD=1.1268;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:6.32:180,0,6	./.	./.	./.	0/0:11,0:11:13.84:0,14,144	0/0:11,0:11:5.12:0,5,149	0/1:12,0:12:49.92:50,0,71	1/1:10,1:9:3.01:32,3,0	0/0:7,0:7:9.03:0,9,132	0/1:23,0:22:44.43:44,0,111	0/0:7,0:7:6.02:0,6,73	0/0:12,0:11:2.65:0,3,24	0/0:4,0:4:4.24:0,4,64	0/0:18,0:18:20.78:0,21,241	0/1:10,1:11:20.74:21,0,101	0/0:13,0:17:15.04:0,15,201	0/1:15,2:17:47.61:48,0,135	0/0:11,0:10:10.20:0,10,106	0/1:12,0:11:19.36:19,0,29	0/0:12,0:11:0.13:0,0,80	0/1:23,0:22:1.54:2,0,100	1/1:6,0:6:1.25:3,1,0	0/1:7,1:8:23.85:24,0,53	0/0:14,0:14:12.04:0,12,168	0/0:23,0:23:18.46:0,18,142	0/0:12,0:19:19.07:0,19,161	0/0:13,0:11:11.30:0,11,111	0/1:11,7:18:24.75:57,0,25
chr10	97942836	.	CCTCCTT	C	1008.91	PASS	AB=0.975;AC=4;AF=0.071;AN=56;BaseQRankSum=3.912;DP=507;FS=29.336;HRun=0;HaplotypeScore=106.9997;InbreedingCoeff=0.4817;MQ=58.90;MQ0=9;MQRankSum=-5.178;QD=16.54;ReadPosRankSum=-1.970;VQSLOD=1.1978;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:70.97:0,71,2144	0/0:7,0:7:18.06:0,18,577	0/0:24,0:8:19.15:0,19,222	0/1:18,0:10:6.94:7,0,185	0/0:14,0:13:32.90:0,33,940	0/0:18,0:18:51.18:0,51,1628	0/0:15,0:15:39.10:0,39,1199	0/1:20,0:19:67.37:202,0,67	0/0:21,0:21:57.20:0,57,1938	0/0:23,0:23:66.18:0,66,2234	0/0:14,0:14:42.09:0,42,1211	0/0:14,0:14:33.10:0,33,967	0/0:14,0:14:42.09:0,42,1296	0/0:15,0:15:45.14:0,45,1383	0/0:12,0:12:33.07:0,33,848	1/1:1,21:22:39.13:911,39,0	0/0:38,0:38:93.48:0,93,3212	0/0:14,0:14:39.08:0,39,1256	0/0:20,0:19:53.32:0,53,1269	0/0:17,0:17:44.47:0,44,1311	0/0:16,0:15:39.13:0,39,1207	0/0:13,0:13:36.12:0,36,1235	0/0:12,0:12:33.11:0,33,1142	0/0:16,0:16:45.15:0,45,1587	0/0:24,0:24:69.22:0,69,2176	0/0:22,0:22:63.17:0,63,1832	0/0:15,0:15:42.12:0,42,1243	0/0:21,0:21:25.61:0,26,759
chr10	97943801	.	TCTTCCTCCCAAGTAGGATTGAAG	T	2480.52	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.555;DP=543;FS=0.000;HRun=0;HaplotypeScore=311.7506;InbreedingCoeff=0.9782;MQ=65.71;MQ0=1;MQRankSum=-5.818;QD=91.87;ReadPosRankSum=1.637;VQSLOD=2.7140;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,10:16:30.10:1867,30,0	0/0:10,0:10:30.10:0,30,2726	0/0:30,0:26:28.36:0,28,2400	0/0:23,0:21:50.72:0,51,2247	0/0:14,0:14:33.11:0,33,3571	0/0:21,0:21:60.21:0,60,6036	0/0:21,0:21:57.20:0,57,5397	0/0:27,0:27:69.22:0,69,5635	0/0:16,0:16:45.15:0,45,4818	0/0:30,0:30:78.25:0,78,7431	0/0:17,0:17:48.16:0,48,4804	0/0:13,0:13:39.13:0,39,4040	0/0:19,0:19:54.19:0,54,5159	0/0:12,0:12:30.10:0,30,3248	0/0:24,0:24:72.25:0,72,7580	0/0:19,0:19:51.18:0,51,5324	0/0:26,0:26:69.24:0,69,6233	1/1:6,5:11:12.04:730,12,0	0/0:16,0:16:36.12:0,36,3062	0/0:17,0:17:48.16:0,48,4617	0/0:26,0:26:66.22:0,66,5977	0/0:24,0:24:66.22:0,66,6126	0/0:22,0:22:60.68:0,61,5708	0/0:22,0:22:60.21:0,60,5947	0/0:15,0:15:33.11:0,33,2922	0/0:18,0:18:48.14:0,48,4305	0/0:28,0:28:78.27:0,78,7517	0/0:6,0:6:18.04:0,18,1341
chr10	97957247	.	C	CGTTAGTCT	494.27	PASS	AB=0.708;AC=5;AF=0.089;AN=56;BaseQRankSum=-0.872;DP=782;DS;FS=13.378;HRun=0;HaplotypeScore=105.6295;InbreedingCoeff=0.4722;MQ=36.13;MQ0=260;MQRankSum=-4.114;QD=9.51;ReadPosRankSum=-1.485;VQSLOD=1.1793;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,3:1:3.01:77,3,0	0/0:15,0:11:30.10:0,30,841	0/0:36,0:17:51.17:0,51,1332	0/0:32,0:13:30.09:0,30,819	0/0:53,0:32:81.28:0,81,2225	0/0:32,0:23:60.21:0,60,1605	0/0:24,0:18:54.18:0,54,1479	0/0:8,0:1:3.01:0,3,51	0/0:28,0:24:54.19:0,54,1471	0/0:37,0:21:60.68:0,61,1630	0/0:44,0:26:69.24:0,69,1911	0/0:17,0:12:27.09:0,27,767	0/0:21,0:17:30.10:0,30,784	0/0:23,0:16:36.12:0,36,1028	0/0:18,0:13:33.11:0,33,922	1/1:6,5:1:3.01:134,3,0	0/0:34,0:23:54.18:0,54,1365	0/0:9,0:3:1.82:0,2,5	0/0:50,0:20:60.21:0,60,1706	0/0:51,0:34:81.28:0,81,2264	0/0:29,0:19:57.20:0,57,1580	0/0:26,0:14:36.12:0,36,974	0/0:40,0:24:57.20:0,57,1572	0/0:26,0:17:45.15:0,45,1200	0/0:36,0:27:35.31:0,35,1937	0/1:10,7:4:74.08:389,0,74	0/0:37,0:36:84.29:0,84,2347	0/0:2,0:1:3.01:0,3,39
chr10	97960470	.	TG	T	146.57	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.524;DP=569;FS=1.620;HRun=1;HaplotypeScore=57.0113;InbreedingCoeff=0.6830;MQ=68.92;MQ0=2;MQRankSum=-4.081;QD=20.94;ReadPosRankSum=0.028;VQSLOD=3.6662;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:36.12:0,36,567	0/0:6,0:6:18.04:0,18,263	0/0:40,0:28:84.20:0,84,1281	0/0:24,0:20:48.12:0,48,721	0/0:23,0:22:69.20:0,69,1050	0/0:30,0:30:90.31:0,90,1410	0/0:13,0:13:36.12:0,36,566	0/0:36,0:36:99:0,108,1668	0/0:21,0:21:60.20:0,60,949	0/0:17,0:17:51.17:0,51,806	0/0:12,0:12:30.09:0,30,452	0/0:16,0:16:48.15:0,48,745	0/0:22,0:22:66.21:0,66,1022	0/0:31,0:31:90.28:0,90,1383	0/0:25,0:25:75.26:0,75,1199	0/0:23,0:23:69.23:0,69,1093	0/0:13,0:13:30.10:0,30,462	1/1:1,6:7:0.70:222,1,0	0/0:17,0:17:51.17:0,51,795	0/0:10,0:10:30.10:0,30,479	0/0:30,0:30:90.21:0,90,1358	0/0:21,0:21:63.21:0,63,998	0/0:10,0:10:27.09:0,27,422	0/0:11,0:11:33.11:0,33,517	0/0:18,0:18:54.18:0,54,863	0/0:31,0:31:93.31:0,93,1444	0/0:30,0:30:90.28:0,90,1348	0/0:17,0:17:48.13:0,48,720
chr10	97960970	.	GAC	G	560.24	PASS	AB=0.845;AC=6;AF=0.115;AN=52;BaseQRankSum=6.725;DP=568;FS=13.334;HRun=0;HaplotypeScore=98.2186;InbreedingCoeff=0.2313;MQ=48.67;MQ0=39;MQRankSum=-4.012;QD=6.29;ReadPosRankSum=-0.806;VQSLOD=1.8727;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:23,3:22:6.92:36,7,0	0/0:18,0:17:51.17:0,51,932	./.	./.	0/0:25,0:25:31.17:0,31,732	0/0:24,0:22:54.11:0,54,933	0/0:22,0:20:24.04:0,24,415	0/0:25,0:22:64.76:0,65,725	0/0:27,0:25:66.18:0,66,1162	0/0:32,0:29:85.44:0,85,1410	0/0:26,0:24:48.12:0,48,814	0/0:20,0:18:42.13:0,42,756	0/0:26,0:24:60.19:0,60,1096	0/0:22,0:21:58.41:0,58,1016	0/0:21,0:20:57.17:0,57,1037	0/1:16,2:17:10.66:155,0,11	0/0:24,1:21:45.54:0,46,822	0/1:12,0:12:33.15:33,0,42	0/0:17,0:15:45.07:0,45,741	0/0:23,0:23:45.13:0,45,791	0/0:30,0:22:48.16:0,48,887	0/0:13,0:12:30.09:0,30,541	0/0:17,0:17:33.02:0,33,498	0/0:24,0:24:45.13:0,45,824	0/0:16,0:15:27.09:0,27,486	0/1:12,8:19:99:318,0,268	0/0:25,0:24:65.96:0,66,1243	0/1:9,4:10:13.61:140,0,14
chr10	97960978	.	CAGAG	C	689.68	PASS	AB=0.839;AC=8;AF=0.143;AN=56;BaseQRankSum=5.830;DP=579;FS=5.026;HRun=0;HaplotypeScore=106.9766;InbreedingCoeff=0.3518;MQ=51.00;MQ0=40;MQRankSum=-3.250;QD=6.05;ReadPosRankSum=-1.448;VQSLOD=2.0571;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:21:8.92:82,9,0	0/0:18,0:17:45.11:0,45,788	0/0:3,0:2:6.02:0,6,78	0/0:14,0:8:6.45:0,6,89	0/0:22,0:22:42.13:0,42,758	0/0:22,0:20:32.14:0,32,566	0/0:23,0:21:30.10:0,30,455	0/1:23,0:20:22.62:23,0,71	0/0:24,0:22:54.17:0,54,1019	0/0:32,0:29:77.12:0,77,1258	0/0:24,0:22:45.14:0,45,816	0/0:19,0:17:38.79:0,39,691	0/0:25,0:23:51.11:0,51,963	0/0:22,0:21:50.64:0,51,883	0/0:19,0:18:48.15:0,48,948	0/1:10,9:18:36.70:37,0,43	0/0:26,0:22:47.48:0,47,798	0/1:12,0:12:30.10:142,0,30	0/0:20,0:19:48.14:0,48,917	0/0:20,0:20:42.13:0,42,807	0/0:34,0:26:59.83:0,60,978	0/0:13,0:12:27.09:0,27,524	0/0:13,0:13:21.07:0,21,321	0/0:25,0:25:48.14:0,48,829	0/0:16,0:15:27.06:0,27,420	0/1:12,11:22:99:445,0,210	0/0:30,0:29:81.14:0,81,1353	1/1:9,0:9:13.07:103,13,0
chr10	97960982	.	G	GAC	567	PASS	AB=0.930;AC=7;AF=0.125;AN=56;BaseQRankSum=6.286;DP=589;FS=9.403;HRun=0;HaplotypeScore=93.1808;InbreedingCoeff=0.1239;MQ=52.96;MQ0=38;MQRankSum=-2.352;QD=4.93;ReadPosRankSum=-2.016;VQSLOD=1.7399;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:20:8.76:83,9,0	0/0:16,0:15:45.11:0,45,625	0/0:6,0:4:8.89:0,9,93	0/0:22,0:12:1.05:0,1,108	0/0:24,0:24:51.11:0,51,693	0/0:23,0:21:35.13:0,35,584	0/0:22,0:20:30.10:0,30,455	0/1:25,0:22:36.32:36,0,350	0/0:23,0:21:54.17:0,54,800	0/0:32,0:29:84.21:0,84,1215	0/0:24,0:22:45.14:0,45,666	0/0:18,0:16:39.12:0,39,574	0/0:24,0:22:60.16:0,60,846	0/0:21,0:21:56.26:0,56,784	0/0:18,0:17:48.15:0,48,712	0/1:19,0:18:35.72:36,0,141	0/0:29,0:25:51.11:0,51,729	0/1:6,7:13:59.50:151,0,59	0/0:22,0:21:60.16:0,60,830	0/0:20,0:20:42.14:0,42,633	0/0:35,1:28:63.13:0,63,877	0/0:12,0:11:27.09:0,27,412	0/0:11,0:11:21.07:0,21,321	0/0:25,0:25:47.89:0,48,712	0/0:17,0:16:36.05:0,36,444	0/1:22,0:21:99:321,0,333	0/0:28,0:28:84.13:0,84,1146	0/1:12,0:9:18.06:72,0,18
chr10	97960988	.	CAG	C	213.78	PASS	AB=0.929;AC=7;AF=0.125;AN=56;BaseQRankSum=6.541;DP=601;FS=3.569;HRun=0;HaplotypeScore=96.0924;InbreedingCoeff=0.6390;MQ=56.64;MQ0=40;MQRankSum=-3.478;QD=3.10;ReadPosRankSum=-2.249;VQSLOD=1.8231;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:18:5.43:19,5,0	0/0:14,0:13:33.06:0,33,477	0/0:11,0:4:11.83:0,12,164	0/0:37,0:21:0.33:0,0,186	0/0:24,0:24:57.20:0,57,976	0/0:21,0:19:30.09:0,30,483	0/0:22,0:20:33.10:0,33,544	1/1:15,7:19:8.15:260,8,0	0/0:24,0:22:54.17:0,54,881	0/0:31,0:28:72.24:0,72,1205	0/0:26,0:24:51.17:0,51,869	0/0:17,0:15:36.12:0,36,598	0/0:26,0:24:60.19:0,60,950	0/0:19,0:19:48.16:0,48,786	0/0:18,0:17:45.14:0,45,733	0/0:18,0:17:8.18:0,8,54	0/0:29,0:25:45.62:0,46,763	0/1:12,1:13:28.52:29,0,37	0/0:21,0:20:54.15:0,54,892	0/0:18,0:18:36.12:0,36,615	0/0:36,0:28:63.21:0,63,1057	0/0:13,0:12:36.12:0,36,585	0/0:13,0:13:24.07:0,24,380	0/0:27,0:27:51.13:0,51,810	0/0:15,0:14:30.10:0,30,502	0/0:23,0:22:48.83:0,49,510	0/0:29,0:29:83.97:0,84,1325	1/1:7,0:9:5.90:31,6,0
chr10	97960992	.	G	GAC	46.45	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=6.249;DP=606;FS=1.134;HRun=0;HaplotypeScore=98.8351;InbreedingCoeff=0.5819;MQ=60.81;MQ0=40;MQRankSum=-0.662;QD=0.71;ReadPosRankSum=-3.165;VQSLOD=1.3989;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,7:16:8.65:128,9,0	0/0:14,0:13:36.06:0,36,464	0/0:17,0:9:18.03:0,18,209	0/1:45,0:27:8.31:8,0,262	0/0:27,0:27:69.17:0,69,968	0/0:20,0:18:39.07:0,39,510	0/0:21,0:19:33.10:0,33,483	0/0:19,0:16:29.92:0,30,284	0/0:23,0:22:57.17:0,57,826	0/0:31,0:28:75.24:0,75,1128	0/0:25,0:23:51.17:0,51,778	0/0:17,0:15:36.12:0,36,548	0/0:27,0:25:66.18:0,66,936	0/0:19,0:19:47.64:0,48,732	0/0:17,0:16:45.14:0,45,666	0/0:17,0:16:14.30:0,14,109	0/0:27,0:23:45.15:0,45,682	0/0:16,0:15:13.17:0,13,138	0/0:20,0:19:57.15:0,57,827	0/0:17,0:17:42.12:0,42,599	0/0:37,0:29:69.19:0,69,993	0/0:13,0:12:36.12:0,36,549	0/0:12,0:12:30.05:0,30,394	0/0:27,0:27:51.13:0,51,734	0/0:15,0:14:33.09:0,33,483	0/0:21,0:20:60.14:0,60,788	0/0:30,0:30:90.23:0,90,1280	0/0:12,0:9:11.76:0,12,84
chr10	97960998	.	CAG	C	334.43	PASS	AB=0.917;AC=5;AF=0.089;AN=56;BaseQRankSum=5.720;DP=603;FS=3.476;HRun=0;HaplotypeScore=93.1231;InbreedingCoeff=0.6675;MQ=64.78;MQ0=31;MQRankSum=-0.804;QD=6.31;ReadPosRankSum=-3.212;VQSLOD=2.6124;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:15:8.06:0,8,139	0/0:13,0:12:33.09:0,33,506	0/1:20,2:13:5.26:5,0,411	0/0:53,0:35:46.53:0,47,613	0/0:28,0:28:81.27:0,81,1351	0/0:18,0:16:33.11:0,33,571	0/0:19,0:17:36.12:0,36,619	1/1:9,11:19:23.50:405,23,0	0/0:24,0:23:51.17:0,51,849	0/0:28,0:27:69.23:0,69,1144	0/0:22,0:20:51.17:0,51,883	0/0:18,0:17:40.24:0,40,581	0/0:26,0:25:63.19:0,63,1047	0/0:21,0:21:45.15:0,45,760	0/0:17,0:16:42.12:0,42,680	0/0:15,0:14:7.26:0,7,82	0/0:25,0:21:42.60:0,43,671	0/0:18,0:17:19.15:0,19,276	0/0:19,0:18:54.17:0,54,894	0/0:19,0:19:42.12:0,42,661	0/0:34,0:28:63.19:0,63,1055	0/0:14,0:14:39.11:0,39,617	0/0:12,0:12:30.10:0,30,495	0/0:23,0:23:42.14:0,42,727	0/0:13,0:12:27.09:0,27,468	0/0:22,0:21:59.73:0,60,671	0/0:29,0:29:82.80:0,83,1343	1/1:11,0:8:2.63:36,3,0
chr10	97963017	.	AC	A	702.45	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.153;DP=628;FS=4.565;HRun=1;HaplotypeScore=61.4668;InbreedingCoeff=0.9701;MQ=80.32;MQ0=0;MQRankSum=-1.902;QD=35.12;ReadPosRankSum=1.337;VQSLOD=3.7736;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,2001	0/0:17,0:17:51.17:0,51,814	0/0:14,0:14:39.13:0,39,586	0/0:16,0:16:39.03:0,39,541	0/0:22,0:22:66.23:0,66,1054	0/0:21,0:21:63.21:0,63,996	0/0:21,0:21:63.20:0,63,981	0/0:29,0:29:84.26:0,84,1270	0/0:17,0:17:51.17:0,51,811	0/0:26,0:26:78.26:0,78,1224	0/0:15,0:15:41.98:0,42,626	0/0:22,0:22:66.22:0,66,1040	0/0:21,0:21:63.19:0,63,959	0/0:22,0:22:66.21:0,66,1009	0/0:21,0:21:63.21:0,63,1004	1/1:0,20:20:57.19:797,57,0	0/0:45,0:45:99:0,135,2128	0/0:19,0:19:57.19:0,57,897	0/0:16,0:16:48.15:0,48,740	0/0:21,0:21:63.20:0,63,981	0/0:24,0:24:72.25:0,72,1151	0/0:21,0:21:63.13:0,63,904	0/0:28,0:28:84.26:0,84,1313	0/0:29,0:29:87.30:0,87,1388	0/0:14,0:14:42.14:0,42,670	0/0:24,0:24:72.24:0,72,1130	0/0:37,0:37:99:0,111,1769	0/0:4,0:4:12.04:0,12,192
chr10	97965441	.	GGTTT	G	3218.29	PASS	AB=0.873;AC=11;AF=0.196;AN=56;BaseQRankSum=13.333;DP=813;FS=4.098;HRun=0;HaplotypeScore=146.8821;InbreedingCoeff=0.6549;MQ=71.94;MQ0=0;MQRankSum=0.965;QD=14.24;ReadPosRankSum=1.347;VQSLOD=3.3313;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,35:61:75.65:1354,76,0	0/0:13,0:13:21.07:0,21,498	0/0:36,0:31:14.98:0,15,267	0/0:18,0:15:15.05:0,15,304	0/0:34,0:34:69.24:0,69,1619	0/0:22,0:22:39.13:0,39,909	0/0:21,0:21:27.09:0,27,637	1/1:28,5:33:15.05:233,15,0	0/0:25,0:25:48.16:0,48,1072	0/1:24,1:25:8.12:8,0,774	0/0:23,0:23:33.05:0,33,679	0/0:38,0:38:78.27:0,78,1838	0/0:24,0:24:42.14:0,42,953	0/0:27,0:27:63.20:0,63,1444	0/0:41,0:41:63.19:0,63,1447	1/1:12,24:36:72.25:1134,72,0	0/0:28,0:28:54.17:0,54,1199	0/0:27,0:27:42.14:0,42,981	0/0:32,0:32:0.88:0,1,966	0/1:28,1:29:2.11:2,0,904	0/0:41,0:41:59.65:0,60,1311	0/0:25,0:25:45.13:0,45,968	0/0:31,0:31:66.21:0,66,1488	0/0:25,0:25:57.67:0,58,1322	0/0:27,0:27:45.14:0,45,1004	0/1:16,0:29:29.15:321,0,29	0/0:29,0:29:54.19:0,54,1274	1/1:6,7:13:21.07:331,21,0
chr10	97967022	.	CT	C	1709.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.110;DP=691;FS=4.652;HRun=1;HaplotypeScore=64.7066;InbreedingCoeff=1.0000;MQ=70.94;MQ0=0;MQRankSum=-2.704;QD=38.84;ReadPosRankSum=1.880;VQSLOD=4.4036;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:44:99:1804,129,0	0/0:15,0:15:45.13:0,45,693	0/0:31,0:28:84.28:0,84,1319	0/0:26,0:26:72.21:0,72,1099	0/0:29,0:29:87.28:0,87,1368	0/0:19,0:19:57.19:0,57,911	0/0:21,0:21:63.21:0,63,1007	0/0:24,0:24:72.24:0,72,1111	0/0:26,0:26:78.22:0,78,1177	0/0:27,0:27:81.26:0,81,1255	0/0:16,0:16:48.16:0,48,764	0/0:22,0:22:66.21:0,66,1032	0/0:22,0:22:66.23:0,66,1053	0/0:23,0:23:69.19:0,69,1055	0/0:22,0:22:66.23:0,66,1055	0/0:20,0:20:60.20:0,60,959	0/0:33,0:33:99:0,99,1552	0/0:24,0:24:72.19:0,72,1092	0/0:22,0:22:66.22:0,66,1046	0/0:33,0:33:99:0,99,1583	0/0:25,0:25:75.24:0,75,1175	0/0:19,0:19:57.18:0,57,888	0/0:19,0:19:57.18:0,57,888	0/0:20,0:20:60.20:0,60,949	0/0:29,0:29:87.27:0,87,1363	0/0:32,0:32:96.32:0,96,1514	0/0:30,0:30:90.31:0,90,1429	0/0:18,0:18:54.11:0,54,744
chr10	97967130	.	TGAC	T	519.29	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.660;DP=609;FS=1.117;HRun=0;HaplotypeScore=88.7093;InbreedingCoeff=0.9977;MQ=81.79;MQ0=0;MQRankSum=-2.792;QD=30.55;ReadPosRankSum=1.596;VQSLOD=4.0710;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.31:0,90,2071	0/0:13,0:13:36.12:0,36,830	0/0:22,0:22:53.20:0,53,1017	0/0:22,0:22:54.28:0,54,871	0/0:28,0:28:84.29:0,84,1936	0/0:27,0:27:78.25:0,78,1750	0/0:15,0:15:45.14:0,45,989	0/0:27,0:27:75.26:0,75,1703	0/0:20,0:20:60.21:0,60,1382	0/0:19,0:19:45.15:0,45,1037	0/0:20,0:20:60.21:0,60,1361	0/0:20,0:20:60.19:0,60,1328	0/0:28,0:28:81.26:0,81,1794	0/0:20,0:20:60.19:0,60,1329	0/0:28,0:28:84.29:0,84,1907	0/0:17,0:17:51.18:0,51,1174	0/0:23,0:23:66.23:0,66,1518	1/1:2,15:17:36.12:614,36,0	0/0:18,0:18:51.18:0,51,1178	0/0:24,0:24:69.22:0,69,1537	0/0:15,0:15:45.15:0,45,1037	0/0:25,0:25:75.26:0,75,1719	0/0:30,0:30:84.29:0,84,1931	0/0:21,0:21:60.21:0,60,1379	0/0:26,0:26:78.24:0,78,1725	0/0:17,0:17:45.15:0,45,1037	0/0:28,0:28:81.26:0,81,1821	0/0:8,0:8:24.08:0,24,552
chr10	97972945	.	C	CACAGACAGACAG	1114.35	PASS	AB=0.829;AC=6;AF=0.111;AN=54;BaseQRankSum=1.580;DP=659;FS=0.000;HRun=0;HaplotypeScore=209.8235;InbreedingCoeff=0.5408;MQ=67.40;MQ0=2;MQRankSum=-5.987;QD=10.61;ReadPosRankSum=-3.954;VQSLOD=1.7724;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:40:18.46:155,0,18	0/0:12,0:12:24.07:0,24,655	0/0:26,0:19:15.01:0,15,197	0/0:23,0:17:5.19:0,5,93	0/0:15,0:14:30.10:0,30,1008	0/0:23,0:23:42.11:0,42,1141	0/0:22,0:22:45.11:0,45,1332	0/1:11,0:23:86.67:252,0,87	0/0:26,0:26:63.20:0,63,2031	0/0:28,0:28:48.16:0,48,1527	0/0:12,0:12:24.07:0,24,701	0/0:31,0:31:35.60:0,36,1429	0/0:27,0:27:57.17:0,57,1775	0/0:28,0:28:63.18:0,63,1875	0/0:28,0:28:60.19:0,60,1838	1/1:7,12:19:6.02:321,6,0	0/0:30,0:30:48.12:0,48,1474	1/1:22,0:22:24.08:513,24,0	0/0:22,0:23:17.61:0,18,725	0/0:23,0:23:45.15:0,45,1515	0/0:42,0:42:84.21:0,84,2519	0/0:16,0:16:30.10:0,30,1042	0/0:11,0:11:21.05:0,21,627	0/0:40,0:40:93.25:0,93,2848	0/0:25,0:25:66.21:0,66,2005	0/0:16,0:17:39.11:0,39,1176	0/0:21,0:21:45.06:0,45,1194	./.
chr10	97972971	.	C	CAGACAGACAGACAG	593.79	PASS	AB=1.000;AC=6;AF=0.111;AN=54;BaseQRankSum=4.096;DP=616;FS=2.057;HRun=0;HaplotypeScore=205.7343;InbreedingCoeff=0.4927;MQ=55.13;MQ0=20;MQRankSum=-4.571;QD=8.02;ReadPosRankSum=-0.605;VQSLOD=2.6906;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,3:34:2.62:0,3,24	0/0:13,0:12:32.98:0,33,900	0/0:17,0:7:18.02:0,18,225	0/0:17,0:7:5.19:0,5,93	0/0:19,0:18:45.15:0,45,1451	0/0:26,0:24:48.12:0,48,1484	0/1:20,0:19:6.38:6,0,1686	0/1:20,0:17:99:117,0,401	0/0:26,0:26:72.07:0,72,2556	0/0:24,0:24:66.19:0,66,2147	0/0:13,0:12:30.09:0,30,944	0/0:28,0:26:72.11:0,72,2121	0/0:22,0:22:62.87:0,63,2295	0/0:25,0:25:72.11:0,72,2398	0/0:30,0:30:78.04:0,78,2431	1/1:8,0:7:6.02:287,6,0	0/0:27,0:26:57.08:0,57,1894	1/1:7,0:26:8.40:300,8,0	0/0:18,0:17:37.85:0,38,1232	0/0:19,0:19:54.17:0,54,1961	0/0:49,0:47:99:0,120,3575	0/0:16,0:16:41.93:0,42,1424	0/0:10,0:10:27.04:0,27,817	0/0:39,0:39:99:0,105,3823	0/0:29,0:29:78.24:0,78,2747	0/0:17,0:17:48.12:0,48,1552	0/0:19,0:19:48.12:0,48,1542	./.
chr10	97972984	.	GCA	G	161.21	PASS	AB=0.970;AC=15;AF=0.288;AN=52;BaseQRankSum=3.187;DP=595;FS=11.508;HRun=0;HaplotypeScore=80.2343;InbreedingCoeff=-0.2133;MQ=51.59;MQ0=28;MQRankSum=1.419;QD=0.53;ReadPosRankSum=-0.428;VQSLOD=0.7624;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:2.65:0,3,11	0/1:10,0:9:23.91:24,0,75	./.	./.	0/0:20,0:22:19.40:0,19,232	0/1:22,0:20:7.75:8,0,108	0/1:23,0:22:17.28:17,0,112	0/1:21,0:15:14.62:15,0,66	0/1:20,0:20:14.93:15,0,144	0/0:22,0:22:15.54:0,16,272	0/0:18,0:16:17.54:0,18,156	0/1:29,2:28:6.57:7,0,293	0/1:21,0:20:25.12:25,0,137	0/1:20,0:20:2.45:2,0,177	0/1:25,2:27:80.55:81,0,334	0/1:14,0:13:0:0,0,0	0/1:22,7:27:14.24:14,0,315	0/0:23,0:24:37.92:0,38,323	0/0:18,0:17:4.26:0,4,43	0/0:20,0:20:15.03:0,15,191	0/0:47,7:51:13.59:0,14,467	0/1:13,1:14:21.03:21,0,103	0/0:8,0:8:15.02:0,15,174	0/1:47,0:47:57.09:57,0,340	0/0:26,0:26:8.66:0,9,268	0/0:19,0:19:23.96:0,24,180	0/0:16,0:17:5.44:0,5,135	1/1:5,0:5:2.84:14,3,0
chr10	97973023	.	C	CAG	390.25	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=1.752;DP=586;FS=2.607;HRun=0;HaplotypeScore=91.1422;InbreedingCoeff=0.6320;MQ=62.45;MQ0=11;MQRankSum=0.817;QD=7.36;ReadPosRankSum=-0.532;VQSLOD=3.3501;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:37:30.20:0,30,286	0/0:4,0:4:11.99:0,12,118	0/0:26,0:11:23.78:0,24,218	0/0:19,0:9:16.39:0,16,118	0/0:14,0:14:23.64:0,24,265	0/0:13,0:12:21:0,21,238	0/0:23,0:23:59.87:0,60,569	0/0:27,0:26:59.78:0,60,528	0/0:18,0:18:50.96:0,51,503	0/0:17,0:17:26.58:0,27,420	0/0:14,0:13:27.01:0,27,305	0/0:23,0:22:47.92:0,48,529	0/0:14,0:13:30.02:0,30,323	0/0:14,0:14:35.99:0,36,367	0/0:29,0:29:83.91:0,84,895	0/0:15,0:15:20.25:0,20,168	0/0:30,0:29:64.22:0,64,681	0/1:30,0:29:12.48:12,0,327	0/0:22,0:22:44.94:0,45,386	0/0:13,0:13:27.89:0,28,279	0/0:54,0:52:80.99:0,81,939	0/0:13,0:13:24.01:0,24,252	0/0:17,0:17:44.18:0,44,398	0/0:30,0:30:84.31:0,84,867	0/0:17,0:17:36.02:0,36,377	1/1:5,14:22:51.01:481,51,0	0/0:14,0:14:37.27:0,37,381	0/0:14,0:14:38.74:0,39,302
chr10	97973536	.	A	ATG	2763.70	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-11.667;DP=548;FS=12.040;HRun=0;HaplotypeScore=63.7735;InbreedingCoeff=0.9883;MQ=65.84;MQ0=2;MQRankSum=1.659;QD=37.86;ReadPosRankSum=0.134;VQSLOD=4.8347;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:60.21:1092,60,0	0/0:13,0:13:39.08:0,39,532	0/0:19,0:12:27.87:0,28,327	0/0:18,0:17:41.59:0,42,520	0/0:23,0:23:66.20:0,66,942	0/0:29,0:29:87.02:0,87,1280	0/0:9,0:9:27.09:0,27,411	0/0:33,0:35:99:0,102,1342	0/0:12,0:12:36.10:0,36,492	0/0:22,0:22:63.20:0,63,910	0/0:15,0:15:45.12:0,45,611	0/0:14,0:14:39.13:0,39,594	0/0:16,0:16:45.14:0,45,668	0/0:14,0:14:42.13:0,42,623	0/0:16,0:16:48.15:0,48,693	0/0:17,0:17:51.12:0,51,700	0/0:28,0:29:83.60:0,84,1094	1/1:2,18:19:45.63:820,46,0	0/0:21,0:21:59.59:0,60,737	0/0:26,0:26:78.20:0,78,1069	0/0:22,0:22:66.20:0,66,968	0/0:5,0:5:12.04:0,12,183	0/0:20,0:20:57.18:0,57,850	0/0:13,0:13:39.13:0,39,592	0/0:31,0:31:90.25:0,90,1227	1/1:1,20:21:60.15:995,60,0	0/0:22,0:22:63.21:0,63,962	0/0:13,0:13:36.09:0,36,521
chr10	97977272	.	ACT	A	813.75	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.240;DP=681;FS=15.431;HRun=0;HaplotypeScore=79.7702;InbreedingCoeff=0.9141;MQ=87.53;MQ0=0;MQRankSum=-2.743;QD=35.38;ReadPosRankSum=-1.153;VQSLOD=4.1427;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.31:0,90,1679	0/0:4,0:4:12.04:0,12,225	0/0:27,0:27:81.27:0,81,1398	0/0:25,0:24:20.03:0,20,857	0/0:23,0:23:69.24:0,69,1292	0/0:18,0:18:54.19:0,54,1011	0/0:32,0:32:90.31:0,90,1686	0/0:37,0:37:99:0,108,1982	0/0:31,0:31:93.32:0,93,1735	0/0:22,0:22:60.21:0,60,1124	0/0:19,0:19:54.19:0,54,1011	0/0:30,0:30:87.30:0,87,1622	0/0:32,0:32:96.33:0,96,1797	0/0:34,0:34:99:0,102,1911	0/0:34,0:33:99:0,102,1911	0/0:28,0:27:78.25:0,78,1421	0/0:17,0:17:48.16:0,48,899	0/0:15,0:15:42.14:0,42,774	0/0:21,0:21:60.21:0,60,1124	0/0:21,0:21:63.22:0,63,1180	0/0:38,0:38:99:0,111,2063	0/0:21,0:21:63.22:0,63,1180	0/0:16,0:16:48.16:0,48,899	0/0:24,0:24:72.25:0,72,1327	0/0:25,0:25:75.24:0,75,1374	1/1:2,21:23:63.20:909,63,0	0/0:30,0:30:90.31:0,90,1686	0/0:4,0:4:9.03:0,9,169
chr10	97979690	.	AT	A	2169.34	PASS	AB=0.846;AC=13;AF=0.232;AN=56;BaseQRankSum=12.355;DP=522;FS=1.354;HRun=10;HaplotypeScore=55.7592;InbreedingCoeff=0.8584;MQ=73.35;MQ0=0;MQRankSum=0.642;QD=17.49;ReadPosRankSum=-0.833;VQSLOD=3.7294;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,7:9:20.34:181,20,0	0/0:7,0:7:15:0,15,147	0/0:10,0:9:19.29:0,19,193	0/1:9,2:11:26.73:27,0,80	0/0:27,2:29:26.10:0,26,740	1/1:3,17:20:44.98:391,45,0	0/0:15,0:15:36.09:0,36,390	1/1:2,23:25:68.97:595,69,0	0/0:15,0:15:36.09:0,36,391	0/0:24,0:24:60.16:0,60,656	0/0:23,0:23:63.16:0,63,690	0/0:26,1:27:34.09:0,34,596	0/0:16,0:16:42.10:0,42,453	0/0:17,0:17:51.13:0,51,557	0/0:29,0:29:81.21:0,81,888	0/0:14,1:15:16.05:0,16,399	0/0:20,0:20:48.10:0,48,512	1/1:3,18:21:50.99:443,51,0	0/0:18,1:19:19.05:0,19,428	0/0:39,0:39:99:0,111,1214	0/0:1,0:1:3.01:0,3,33	0/0:15,0:15:33.09:0,33,365	0/0:20,1:21:28.09:0,28,538	0/0:6,0:6:18.05:0,18,199	0/0:18,0:18:51.14:0,51,564	1/1:6,18:24:23.80:436,24,0	0/0:32,0:32:78.16:0,78,842	1/1:2,12:14:32.99:287,33,0
chr10	97980508	.	CT	C	1203.39	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.680;DP=409;FS=9.805;HRun=1;HaplotypeScore=40.5445;InbreedingCoeff=0.9720;MQ=78.82;MQ0=0;MQRankSum=-2.914;QD=34.38;ReadPosRankSum=-2.516;VQSLOD=1.4737;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39.13:0,39,623	0/0:4,0:4:12.04:0,12,187	0/0:16,1:15:27.55:0,28,505	0/0:8,0:8:24.01:0,24,313	0/0:25,0:25:75.26:0,75,1199	0/0:14,0:14:42.14:0,42,671	0/0:6,0:6:18.06:0,18,288	1/1:0,22:22:66.20:905,66,0	0/0:9,0:9:27.09:0,27,432	0/0:26,0:26:78.27:0,78,1246	0/0:23,0:23:69.21:0,69,1058	0/0:17,0:17:51.17:0,51,815	0/0:18,0:18:54.17:0,54,840	0/0:7,0:7:18.06:0,18,288	0/0:13,0:13:39.13:0,39,618	0/0:16,0:16:48.15:0,48,745	0/0:13,0:13:36.12:0,36,575	0/0:11,0:11:33.09:0,33,502	0/0:17,0:17:51.17:0,51,794	0/0:21,0:21:63.21:0,63,1007	0/0:11,0:11:27.09:0,27,432	0/0:10,0:10:30.10:0,30,480	0/0:12,0:12:36.12:0,36,576	0/0:8,0:8:24.06:0,24,360	0/0:19,0:19:57.19:0,57,911	0/0:14,0:14:42.14:0,42,671	0/0:21,0:21:63.21:0,63,1007	1/1:0,13:13:30.10:419,30,0
chr10	97981930	.	T	TGG	9006.04	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-15.841;DP=709;FS=2.812;HRun=2;HaplotypeScore=76.6034;InbreedingCoeff=0.9999;MQ=68.01;MQ0=0;MQRankSum=0.559;QD=47.15;ReadPosRankSum=-0.244;VQSLOD=4.6057;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,37:49:99:1903,102,0	0/0:10,0:10:30.10:0,30,441	0/0:25,0:22:60.20:0,60,862	0/0:21,0:18:45.15:0,45,641	0/0:25,0:25:69.23:0,69,1016	0/0:20,0:20:57.19:0,57,834	0/0:20,0:20:57.16:0,57,799	1/1:3,30:33:93.32:1742,93,0	0/0:18,0:18:51.17:0,51,751	0/0:23,0:23:60.20:0,60,884	0/0:17,0:17:51.17:0,51,751	0/0:34,0:34:96.32:0,96,1413	0/0:29,0:29:87.29:0,87,1281	0/0:15,0:15:42.14:0,42,618	0/0:37,0:37:99:0,108,1591	1/1:0,35:35:96.33:1799,96,0	0/0:35,0:36:99:0,105,1503	1/1:1,22:24:60.21:1124,60,0	0/0:17,1:18:39.13:0,39,575	0/0:30,0:30:81.27:0,81,1192	0/0:51,0:51:99:0,153,2202	0/0:18,0:18:54.18:0,54,793	0/0:13,0:13:39.13:0,39,574	0/0:16,0:16:48.16:0,48,707	0/0:21,0:21:63.21:0,63,927	1/1:2,28:30:87.30:1595,87,0	0/0:21,0:20:57.15:0,57,815	1/1:1,19:20:45.15:843,45,0
chr10	97982102	.	GGGCAGTCTCTACAT	G	2649.70	PASS	AB=0.563;AC=3;AF=0.054;AN=56;BaseQRankSum=8.098;DP=539;FS=2.867;HRun=0;HaplotypeScore=199.7022;InbreedingCoeff=0.6376;MQ=61.84;MQ0=2;MQRankSum=-8.294;QD=63.09;ReadPosRankSum=-0.923;VQSLOD=3.4877;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,18:24:48.16:1623,48,0	0/0:5,0:5:15.05:0,15,1053	0/0:17,0:10:30.10:0,30,1407	0/0:26,0:14:36.11:0,36,1665	0/0:13,0:13:39.12:0,39,2553	0/0:16,0:16:42.14:0,42,2719	0/0:22,0:22:63.22:0,63,3984	0/0:23,0:23:69.23:0,69,4209	0/0:21,0:21:63.22:0,63,4379	0/0:19,0:19:51.18:0,51,3265	0/0:13,0:12:33.11:0,33,2130	0/0:25,0:25:69.22:0,69,4508	0/0:22,0:22:63.22:0,63,4115	0/0:16,0:16:45.15:0,45,3140	0/0:25,0:25:72.25:0,72,4894	0/0:34,0:34:99:0,99,6647	0/0:30,0:30:84.29:0,84,4966	0/1:4,14:18:90.07:1133,0,90	0/0:16,0:16:45.15:0,45,2510	0/0:11,0:11:30.10:0,30,2012	0/0:34,0:34:99:0,99,6363	0/0:12,0:12:36.12:0,36,2386	0/0:10,0:10:30.10:0,30,1929	0/0:27,0:27:78.24:0,78,4794	0/0:13,0:13:39.13:0,39,2415	0/0:13,0:13:36.12:0,36,2234	0/0:27,0:27:81.28:0,81,5497	0/0:7,0:7:21.07:0,21,1348
chr10	97983703	.	C	CCCCA	2042.63	PASS	AB=0.643;AC=10;AF=0.179;AN=56;BaseQRankSum=-0.559;DP=375;FS=0.701;HRun=0;HaplotypeScore=66.7252;InbreedingCoeff=0.6911;MQ=62.46;MQ0=1;MQRankSum=-3.825;QD=31.43;ReadPosRankSum=-1.201;VQSLOD=3.3212;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,9:16:24.01:530,24,0	0/0:9,0:9:24.08:0,24,418	0/0:17,0:14:21.49:0,21,332	0/0:18,0:14:18.56:0,19,315	0/0:10,0:10:15.03:0,15,207	0/0:10,0:10:24.08:0,24,418	0/0:20,0:19:42.13:0,42,699	1/1:7,10:16:26.96:490,27,0	0/0:17,0:17:36.09:0,36,570	0/0:13,0:12:33.11:0,33,572	0/0:8,0:8:12.04:0,12,209	0/0:23,0:23:63.20:0,63,1064	0/0:8,0:8:21.07:0,21,366	0/0:12,0:12:27.09:0,27,466	0/0:15,0:15:39.12:0,39,653	0/1:4,5:9:86.46:270,0,86	0/0:14,0:14:42.13:0,42,693	1/1:3,5:7:15.01:304,15,0	0/0:2,0:1:3.01:0,3,52	0/0:7,0:7:12.04:0,12,205	0/0:35,0:35:84.24:0,84,1392	0/0:8,0:8:24.08:0,24,411	0/0:11,0:10:27.08:0,27,444	0/0:13,0:13:33.09:0,33,509	0/0:20,0:20:48.15:0,48,809	0/1:4,4:8:34.19:310,0,34	0/0:20,0:20:51.17:0,51,888	1/1:0,6:6:12.04:304,12,0
chr10	97983892	.	TGG	T	1212.48	PASS	AB=0.899;AC=6;AF=0.107;AN=56;BaseQRankSum=2.427;DP=419;FS=5.839;HRun=11;HaplotypeScore=53.7577;InbreedingCoeff=0.4936;MQ=50.97;MQ0=9;MQRankSum=3.981;QD=16.38;ReadPosRankSum=6.005;VQSLOD=1.5855;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:21:54.13:574,54,0	0/0:10,0:10:18.04:0,18,237	0/0:5,0:3:8.98:0,9,111	0/0:8,0:4:8.25:0,8,56	0/0:14,0:15:17.55:0,18,229	0/1:9,0:10:14.31:14,0,155	0/0:18,0:19:38.33:0,38,483	0/0:21,0:22:38.33:0,38,404	0/0:9,0:10:17.52:0,18,198	0/0:12,0:10:2.69:0,3,38	0/0:9,0:9:9.02:0,9,118	0/0:22,0:22:38.80:0,39,459	0/0:14,0:14:20.72:0,21,274	0/0:10,0:12:23.51:0,24,248	0/0:16,0:19:23.01:0,23,232	0/0:13,0:15:24.02:0,24,225	0/0:23,0:26:38.96:0,39,446	1/1:4,28:31:69.16:733,69,0	0/1:7,1:5:25.91:26,0,40	0/0:11,0:13:17.42:0,17,124	0/0:13,0:14:11.50:0,11,104	0/0:14,0:15:23.55:0,24,289	0/0:5,1:5:5.50:0,6,43	0/0:16,1:16:17.97:0,18,186	0/0:12,0:12:21.07:0,21,322	0/0:16,0:13:12:0,12,163	0/0:14,0:16:23.04:0,23,264	0/0:10,0:10:15.05:0,15,186
chr10	97983902	.	G	GGT	219.36	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-0.753;DP=377;FS=0.000;HRun=0;HaplotypeScore=56.7881;InbreedingCoeff=0.4397;MQ=59.32;MQ0=7;MQRankSum=1.989;QD=8.12;ReadPosRankSum=2.052;VQSLOD=2.5582;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:62.53:0,63,446	0/0:6,0:6:18.03:0,18,192	0/0:10,0:8:20.74:0,21,180	0/1:11,0:7:8.13:8,0,101	0/0:13,0:13:27.02:0,27,286	0/0:11,0:11:32.85:0,33,298	0/0:22,0:21:38.79:0,39,447	0/0:23,0:22:53.98:0,54,581	0/0:11,0:11:26.98:0,27,253	0/0:7,0:5:9:0,9,80	0/0:8,0:8:21.01:0,21,208	0/0:19,0:19:50.70:0,51,475	0/0:9,0:9:23.70:0,24,230	0/0:15,0:15:41.99:0,42,397	0/0:13,0:13:35.78:0,36,333	1/1:5,10:15:3.15:296,3,0	0/0:21,0:21:41.72:0,42,408	0/0:31,0:30:74.42:0,74,524	0/0:12,0:10:20.96:0,21,185	0/0:11,0:10:26.81:0,27,200	0/0:10,0:10:20.92:0,21,179	0/0:14,0:14:35.88:0,36,329	0/0:6,0:4:8.98:0,9,73	0/0:9,0:8:20.95:0,21,198	0/0:11,0:11:21.07:0,21,282	0/0:15,0:12:23.93:0,24,235	0/0:11,0:11:26.72:0,27,241	0/0:7,0:7:15.05:0,15,202
chr10	97984106	.	G	GT	2590.38	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=-9.028;DP=708;FS=3.731;HRun=1;HaplotypeScore=62.4568;InbreedingCoeff=0.9929;MQ=55.59;MQ0=6;MQRankSum=-2.154;QD=38.66;ReadPosRankSum=-3.691;VQSLOD=2.6761;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,153,1986	0/0:10,0:10:27.09:0,27,350	./.	0/0:29,0:5:15.05:0,15,193	0/0:28,0:28:81.26:0,81,1052	0/0:23,0:23:66.21:0,66,857	0/0:29,0:29:84.27:0,84,1091	1/1:2,28:30:90.29:1306,90,0	0/0:37,0:37:99:0,111,1422	0/0:27,0:27:81.26:0,81,1052	0/0:12,0:12:27.09:0,27,350	0/0:32,0:32:93.29:0,93,1193	0/0:40,0:40:99:0,108,1385	0/0:25,0:25:72.23:0,72,935	0/0:23,0:23:66.21:0,66,857	0/0:21,0:21:60.20:0,60,779	0/0:29,0:29:84.27:0,84,1090	0/0:18,0:17:48.16:0,48,623	0/0:22,0:21:57.19:0,57,740	0/0:18,0:18:54.16:0,54,685	0/0:40,0:40:99:0,108,1402	0/0:18,0:18:48.14:0,48,608	0/0:16,0:16:42.14:0,42,545	0/0:29,0:29:75.24:0,75,974	0/0:19,0:19:57.15:0,57,710	1/1:3,20:23:24.24:842,24,0	0/0:21,0:21:59.94:0,60,779	1/1:0,13:13:39.13:584,39,0
chr10	97986401	.	TTG	T	545.03	PASS	AB=0.930;AC=8;AF=0.143;AN=56;BaseQRankSum=5.893;DP=657;FS=17.281;HRun=0;HaplotypeScore=89.5593;InbreedingCoeff=0.1520;MQ=64.92;MQ0=0;MQRankSum=-0.920;QD=5.00;ReadPosRankSum=0.056;VQSLOD=1.4410;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:31:78.03:0,78,795	0/1:8,1:9:12.58:13,0,315	0/0:26,0:17:16.22:0,16,185	0/1:10,0:6:19.93:20,0,110	0/0:43,0:43:78.93:0,79,1573	0/0:24,1:25:20.27:0,20,748	0/1:12,1:13:6.58:7,0,383	0/0:41,1:42:59.62:0,60,1413	0/0:18,0:18:45.15:0,45,722	0/0:38,2:40:32:0,32,1484	0/0:26,1:27:35.58:0,36,1079	0/0:24,0:24:60.19:0,60,949	0/0:20,0:20:51.17:0,51,827	0/0:20,1:21:14.51:0,15,742	0/0:31,0:31:44.50:0,45,1046	0/0:6,0:27:36.06:0,36,304	0/0:22,0:22:57.17:0,57,899	1/1:2,18:20:45.14:550,45,0	0/0:18,0:18:27.09:0,27,435	0/0:30,1:31:47.59:0,48,1228	0/1:14,1:15:3.55:4,0,454	0/0:13,0:13:33.09:0,33,510	0/0:18,0:18:39.09:0,39,582	0/1:13,2:15:34.22:34,0,471	0/0:22,0:22:54.18:0,54,872	0/0:33,0:33:81.28:0,81,1307	0/1:25,2:27:52.78:53,0,697	0/0:16,0:16:36.12:0,36,584
chr10	97987133	.	GGGTATT	G	1617.57	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.332;DP=779;FS=1.670;HRun=0;HaplotypeScore=158.2031;InbreedingCoeff=0.8486;MQ=89.00;MQ0=0;MQRankSum=-8.389;QD=52.18;ReadPosRankSum=2.405;VQSLOD=4.0193;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,169,5752	0/0:11,0:11:24.08:0,24,836	0/0:32,0:32:93.32:0,93,3047	0/0:27,0:26:66.21:0,66,2015	0/0:28,0:28:78.24:0,78,2512	0/0:25,0:25:69.24:0,69,2405	0/0:29,0:29:75.26:0,75,2606	0/0:34,0:34:90.29:0,90,2945	0/0:33,0:33:96.32:0,96,3225	0/0:33,0:33:93.32:0,93,3241	0/0:21,0:21:60.19:0,60,1962	0/0:32,0:32:87.30:0,87,2925	0/0:36,0:36:99:0,99,3366	0/0:37,0:37:99:0,99,3276	0/0:36,0:36:99:0,102,3505	1/1:5,26:31:75.26:1712,75,0	0/0:38,0:38:99:0,108,3632	0/0:21,0:21:57.20:0,57,1969	0/0:19,0:19:42.14:0,42,1455	0/0:13,0:13:27.09:0,27,941	0/0:47,0:47:99:0,123,4154	0/0:22,0:22:60.21:0,60,1938	0/0:21,0:21:63.20:0,63,2108	0/0:17,0:17:48.16:0,48,1620	0/0:29,0:29:87.30:0,87,3023	0/0:21,0:21:51.18:0,51,1778	0/0:24,0:24:69.24:0,69,2370	0/0:1,0:1:3.01:0,3,105
chr10	97990197	.	ATGTC	A	429.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.563;DP=618;FS=9.911;HRun=0;HaplotypeScore=95.0161;InbreedingCoeff=0.9415;MQ=79.41;MQ0=1;MQRankSum=-2.887;QD=42.92;ReadPosRankSum=2.556;VQSLOD=3.9378;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.26:0,75,2006	0/0:3,0:3:9.03:0,9,246	0/0:19,0:19:51.18:0,51,1338	0/0:9,0:9:24.53:0,25,552	0/0:33,0:33:99:0,99,2569	0/0:33,0:33:99:0,99,2587	0/0:16,0:16:48.16:0,48,1261	0/0:36,0:36:96.33:0,96,2583	0/0:18,0:18:54.19:0,54,1469	0/0:29,0:29:84.29:0,84,2168	0/0:25,0:25:75.26:0,75,1967	0/0:22,0:22:66.23:0,66,1773	0/0:26,0:26:75.26:0,75,2004	0/0:19,0:19:57.20:0,57,1544	0/0:31,0:31:93.32:0,93,2537	0/0:14,0:14:42.14:0,42,1134	0/0:26,0:26:66.23:0,66,1779	1/1:0,10:9:27.09:523,27,0	0/0:21,0:21:63.22:0,63,1631	0/0:35,0:35:99:0,105,2866	0/0:12,0:12:36.12:0,36,986	0/0:34,0:34:99:0,102,2622	0/0:24,0:24:72.25:0,72,1955	0/0:13,0:13:39.13:0,39,1067	0/0:23,0:23:69.24:0,69,1847	0/0:17,0:17:48.16:0,48,1264	0/0:33,0:33:96.33:0,96,2554	0/0:9,0:9:27.09:0,27,739
chr10	97993517	.	G	GCTGTGGCAA	1508.10	PASS	AB=0.543;AC=1;AF=0.018;AN=56;BaseQRankSum=-3.935;DP=710;FS=0.000;HRun=0;HaplotypeScore=192.5264;InbreedingCoeff=-0.0204;MQ=80.33;MQ0=0;MQRankSum=-5.149;QD=79.37;ReadPosRankSum=-1.157;VQSLOD=3.0775;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:49.65:0,50,2433	0/0:10,0:10:30.08:0,30,824	0/0:23,0:23:53.56:0,54,1029	0/0:14,0:13:26.77:0,27,565	0/0:20,0:20:54.19:0,54,1616	0/0:25,0:25:72.23:0,72,2095	0/0:38,0:38:99:0,105,3004	0/0:12,0:12:27.09:0,27,795	0/0:27,0:27:78.27:0,78,2340	0/0:24,0:24:66.23:0,66,1978	0/0:9,0:9:27.08:0,27,734	0/0:41,0:41:99:0,120,3564	0/0:41,0:40:99:0,114,2909	0/0:43,0:43:99:0,126,3399	0/0:33,0:33:99:0,99,2801	0/1:3,13:19:50.99:1583,0,51	0/0:31,0:31:93.29:0,93,2722	0/0:18,0:18:51.17:0,51,1453	0/0:18,0:18:48.16:0,48,1390	0/0:22,0:22:60.19:0,60,1672	0/0:58,0:58:99:0,162,4557	0/0:16,0:16:39.13:0,39,1170	0/0:13,0:13:39.13:0,39,1130	0/0:21,0:21:60.19:0,60,1733	0/0:19,0:19:45.13:0,45,1223	0/0:31,0:31:87.30:0,87,2592	0/0:33,0:30:99:0,99,2789	0/0:3,0:3:9.03:0,9,270
chr10	97995695	.	AAAGCCG	A	3077.60	PASS	AB=0.564;AC=5;AF=0.089;AN=56;BaseQRankSum=10.763;DP=786;FS=0.541;HRun=0;HaplotypeScore=167.0906;InbreedingCoeff=0.7725;MQ=84.54;MQ0=0;MQRankSum=-8.048;QD=50.45;ReadPosRankSum=-3.144;VQSLOD=3.2174;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,142,4963	0/0:13,0:13:39.13:0,39,1356	0/0:25,0:25:75.20:0,75,2178	0/0:27,0:27:75.21:0,75,2435	0/0:33,0:33:99:0,99,3318	0/0:27,0:27:81.28:0,81,2896	0/0:21,0:21:63.21:0,63,2201	1/1:4,30:34:84.67:1775,85,0	0/0:28,0:28:78.23:0,78,2538	0/0:25,0:25:75.26:0,75,2628	0/0:23,0:23:63.21:0,63,2129	0/0:27,0:27:81.26:0,81,2711	0/0:33,0:33:99:0,99,3432	0/0:30,0:30:90.31:0,90,3264	0/0:31,0:31:87.24:0,87,2963	0/0:24,0:24:72.25:0,72,2578	0/0:35,0:35:99:0,105,3745	0/0:24,0:24:69.22:0,69,2352	0/0:28,0:28:84.29:0,84,3064	0/0:37,0:37:99:0,108,3905	0/0:50,0:50:99:0,147,5258	0/0:24,0:24:72.24:0,72,2484	0/0:24,0:24:72.25:0,72,2561	0/0:27,0:27:75.26:0,75,2716	0/0:27,0:27:81.27:0,81,2745	0/1:5,17:22:99:1069,0,379	0/0:34,0:34:99:0,102,3556	1/1:0,5:5:15.05:361,15,0
chr10	97998028	.	T	TCTTATA	14413.27	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-1.161;DP=685;FS=10.496;HRun=0;HaplotypeScore=147.1202;InbreedingCoeff=0.9623;MQ=77.63;MQ0=0;MQRankSum=-16.494;QD=90.65;ReadPosRankSum=-3.149;VQSLOD=5.6058;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,28:40:99:3411,108,0	0/0:13,0:13:39.13:0,39,961	0/0:30,0:30:83.02:0,83,1931	0/0:18,0:18:48.16:0,48,1101	0/0:8,0:8:24.08:0,24,591	0/0:12,0:12:36.12:0,36,884	0/0:31,0:31:84.27:0,84,2012	1/1:15,15:32:96.32:3119,96,0	0/0:25,0:25:72.25:0,72,1746	0/0:25,0:25:69.24:0,69,1659	0/0:8,0:8:24.08:0,24,585	0/0:35,0:35:99:0,102,2458	0/0:37,0:37:99:0,105,2560	0/0:30,0:30:90.30:0,90,2160	0/0:24,0:24:72.23:0,72,1724	1/1:5,24:35:90.30:3177,90,0	0/0:25,0:25:72.25:0,72,1773	1/1:6,10:19:42.14:1508,42,0	0/0:22,0:22:57.20:0,57,1379	0/0:15,0:15:45.15:0,45,1070	0/0:67,0:67:99:0,199,4668	0/0:17,0:17:48.16:0,48,1179	0/0:11,0:11:30.10:0,30,715	0/0:32,0:32:96.32:0,96,2313	0/0:22,0:22:66.23:0,66,1600	1/1:6,22:32:22.41:3088,22,0	0/0:19,0:19:54.19:0,54,1305	1/1:0,1:1:3.01:110,3,0
chr10	97998055	.	G	GT	1326.80	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.761;DP=669;FS=8.007;HRun=1;HaplotypeScore=95.3126;InbreedingCoeff=0.8986;MQ=75.86;MQ0=0;MQRankSum=-6.746;QD=33.17;ReadPosRankSum=-3.169;VQSLOD=1.8464;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:40:99:1422,102,0	0/0:14,0:14:42.11:0,42,528	0/0:20,0:20:51.64:0,52,663	0/0:24,0:24:54.17:0,54,684	0/0:14,0:14:36.12:0,36,467	0/0:17,0:17:51.17:0,51,662	0/0:21,0:21:63.18:0,63,802	0/0:21,0:21:63.19:0,63,794	0/0:26,0:26:78.25:0,78,1012	0/0:33,0:33:96.30:0,96,1232	0/0:6,0:6:18.06:0,18,234	0/0:33,0:33:99:0,99,1285	0/0:29,0:29:81.25:0,81,1036	0/0:23,0:23:69.22:0,69,894	0/0:23,0:23:66.20:0,66,842	0/0:31,0:31:78.25:0,78,1011	0/0:23,0:23:63.20:0,63,816	0/0:18,0:18:48.16:0,48,618	0/0:21,0:21:60.15:0,60,740	0/0:25,0:25:72.23:0,72,935	0/0:62,0:62:99:0,178,2283	0/0:17,0:17:51.15:0,51,645	0/0:14,0:14:42.14:0,42,545	0/0:36,0:36:99:0,105,1363	0/0:25,0:25:72.23:0,72,935	0/0:29,0:29:84.23:0,84,1068	0/0:22,0:22:63.19:0,63,801	0/0:2,0:2:6.02:0,6,78
chr10	97998978	.	T	TTATA	3851.22	PASS	AB=0.818;AC=8;AF=0.167;AN=48;BaseQRankSum=-6.542;DP=225;FS=42.992;HRun=0;HaplotypeScore=34.5275;InbreedingCoeff=0.5765;MQ=61.37;MQ0=1;MQRankSum=-5.098;QD=44.27;ReadPosRankSum=-2.882;VQSLOD=1.2002;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,4:7:12.04:257,12,0	./.	0/0:5,0:3:9.03:0,9,126	0/0:4,0:3:8.76:0,9,98	0/0:6,0:6:12.04:0,12,206	0/0:8,0:8:21.07:0,21,361	./.	1/1:17,30:51:99:2241,111,0	0/0:2,0:2:6.02:0,6,103	0/0:9,0:9:24.08:0,24,389	0/0:8,0:8:18.06:0,18,309	0/0:5,0:5:15.05:0,15,258	0/0:4,0:4:12.04:0,12,202	0/0:3,0:3:9.02:0,9,130	0/0:5,0:5:9.02:0,9,129	0/1:5,0:5:14.94:140,0,15	0/0:11,0:11:27.09:0,27,464	0/0:14,0:14:33.11:0,33,550	0/0:17,0:17:24.17:0,24,583	0/0:9,0:9:21.07:0,21,361	0/0:2,0:2:6.01:0,6,77	0/0:2,0:2:6.02:0,6,103	./.	./.	0/0:8,0:8:21.07:0,21,361	0/1:3,4:7:9.70:342,0,10	0/0:13,0:13:39.13:0,39,661	1/1:5,11:17:38.92:871,39,0
chr10	97998988	.	A	ATATT	2182.16	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=6.933;DP=231;FS=46.424;HRun=0;HaplotypeScore=38.9483;InbreedingCoeff=0.3113;MQ=67.48;MQ0=1;MQRankSum=-5.325;QD=25.08;ReadPosRankSum=1.029;VQSLOD=1.2670;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:8:52.94:102,0,53	./.	0/0:8,0:6:15.02:0,15,207	0/0:4,0:3:5.61:0,6,50	0/0:5,0:5:15.04:0,15,242	0/0:8,0:8:21.07:0,21,374	0/0:2,0:2:5.99:0,6,50	0/1:52,0:52:99:1232,0,156	0/0:3,0:3:9.01:0,9,133	0/0:9,0:9:24.08:0,24,410	0/0:6,0:6:18.06:0,18,327	0/0:5,0:5:15.05:0,15,272	0/0:5,0:5:15.04:0,15,242	0/0:3,0:3:6.02:0,6,109	0/0:5,0:5:9.02:0,9,134	1/1:1,4:5:9.03:236,9,0	0/0:11,0:11:30.09:0,30,507	0/0:13,0:13:39.03:0,39,609	0/0:16,0:16:39.08:0,39,577	0/0:11,0:11:30.06:0,30,456	0/0:2,0:2:3.01:0,3,54	0/0:2,0:2:6.02:0,6,109	0/0:2,0:2:3:0,3,25	0/0:1,0:1:2.92:0,3,17	0/0:8,0:8:24.07:0,24,406	0/1:8,0:8:11.89:187,0,12	0/0:14,0:14:42.08:0,42,691	1/1:14,0:14:34.67:559,35,0
chr10	98001211	.	T	TA	376.07	PASS	AB=0.823;AC=6;AF=0.107;AN=56;BaseQRankSum=-1.185;DP=199;FS=0.000;HRun=12;HaplotypeScore=24.8837;InbreedingCoeff=0.0550;MQ=53.09;MQ0=7;MQRankSum=0.402;QD=5.37;ReadPosRankSum=0.659;VQSLOD=0.0123;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,1:19:6.99:7,0,199	0/0:1,0:1:2.98:0,3,22	0/0:14,0:4:5.82:0,6,36	0/0:10,0:3:2.97:0,3,22	0/0:8,0:9:22.91:0,23,159	0/0:3,0:3:5.96:0,6,44	0/1:3,1:4:17.24:17,0,54	0/0:8,0:18:12.83:0,13,47	0/0:3,0:3:2.96:0,3,22	0/0:1,0:1:2.98:0,3,22	0/0:4,0:4:5.95:0,6,44	0/0:3,0:4:10.99:0,11,71	0/0:2,0:2:5.97:0,6,44	0/0:3,0:3:5.97:0,6,44	0/0:1,0:1:2.98:0,3,22	0/0:3,0:6:10.91:0,11,45	0/1:14,1:16:7.08:7,0,113	1/1:7,20:27:10.13:408,10,0	0/0:12,0:6:2.96:0,3,22	0/0:4,0:4:8.95:0,9,66	0/0:4,0:4:11.93:0,12,88	0/0:2,0:2:2.98:0,3,22	0/1:1,2:3:12.89:49,0,13	0/0:8,0:8:20.85:0,21,153	0/0:3,0:3:8.95:0,9,66	0/0:2,0:2:0.47:0,0,1	0/0:1,0:1:2.98:0,3,22	0/0:1,0:7:8.15:0,8,24
chr10	98001273	.	CATAA	C	527.75	PASS	AC=18;AF=0.600;AN=30;BaseQRankSum=3.086;DP=153;FS=7.319;HRun=0;HaplotypeScore=35.4785;InbreedingCoeff=0.5674;MQ=65.00;MQ0=3;MQRankSum=1.264;QD=7.23;ReadPosRankSum=-0.530;VQSLOD=0.0518;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:12:5.66:32,6,0	./.	./.	./.	./.	0/0:8,0:8:12.04:0,12,276	1/1:4,1:5:6:69,6,0	./.	0/0:4,0:4:6.02:0,6,137	./.	./.	1/1:3,1:4:3.01:46,3,0	./.	1/1:1,2:3:6.02:91,6,0	0/0:2,0:2:3.01:0,3,70	1/1:3,0:4:5.68:39,6,0	1/1:5,5:10:15.05:228,15,0	1/1:16,0:18:3:28,3,0	1/1:15,1:14:6.02:90,6,0	./.	./.	./.	./.	0/0:3,0:3:6.02:0,6,111	0/0:3,0:3:3.01:0,3,52	1/1:0,0:1:3:28,3,0	./.	0/0:19,0:19:36.12:0,36,769
chr10	98001342	.	T	TA	110.54	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.948;DP=235;FS=1.701;HRun=0;HaplotypeScore=36.4718;InbreedingCoeff=0.5320;MQ=63.96;MQ0=2;MQRankSum=0.085;QD=11.05;ReadPosRankSum=0.893;VQSLOD=3.1534;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:18.21:0,18,91	0/0:2,0:2:6.02:0,6,84	0/0:14,0:5:14.49:0,14,93	0/0:9,0:6:10.06:0,10,75	0/0:8,0:8:18.02:0,18,229	0/0:10,0:10:30.10:0,30,417	0/0:4,0:4:12.03:0,12,150	0/0:39,0:39:99:0,111,1464	0/0:7,0:7:21.07:0,21,293	0/0:3,0:3:9.03:0,9,126	0/0:5,0:5:15.01:0,15,187	0/0:5,0:5:12.04:0,12,167	0/0:2,0:2:6.02:0,6,84	0/0:7,0:7:18.06:0,18,248	0/0:4,0:4:12.04:0,12,168	1/1:2,8:10:21.03:202,21,0	0/0:15,0:15:42.14:0,42,586	0/0:22,0:21:53.03:0,53,307	0/0:6,0:6:18.05:0,18,237	0/0:7,0:7:20.70:0,21,189	0/0:3,0:3:9:0,9,105	0/0:2,0:2:5.98:0,6,62	0/0:4,0:4:12:0,12,146	0/0:2,0:2:6.02:0,6,84	0/0:9,0:9:27.05:0,27,350	0/0:6,0:6:15.05:0,15,197	0/0:6,0:6:18.06:0,18,252	0/0:14,0:14:39.08:0,39,497
chr10	98001343	.	TA	T	845.15	PASS	AB=0.855;AC=8;AF=0.143;AN=56;BaseQRankSum=-0.537;DP=239;FS=0.000;HRun=11;HaplotypeScore=35.9580;InbreedingCoeff=0.5722;MQ=65.71;MQ0=2;MQRankSum=0.339;QD=11.74;ReadPosRankSum=-0.941;VQSLOD=1.9490;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:9:20.02:0,20,106	0/0:2,0:2:6.02:0,6,64	0/0:15,0:6:6.47:0,6,78	0/1:9,1:6:4.81:5,0,26	0/0:8,0:8:17.98:0,18,178	0/0:10,0:10:30.08:0,30,320	0/0:4,0:4:12.01:0,12,117	1/1:12,27:39:77.82:628,78,0	0/0:7,0:7:21.05:0,21,224	0/0:3,0:3:9.02:0,9,96	0/0:7,0:7:14.95:0,15,145	0/1:3,1:4:12.61:13,0,84	0/0:2,0:2:6.02:0,6,64	0/0:7,0:7:18.03:0,18,184	0/0:4,0:4:12.03:0,12,128	0/0:10,0:10:22.90:0,23,121	0/0:15,0:15:39.10:0,39,416	0/0:22,0:21:54.14:0,54,571	0/0:7,0:7:16.83:0,17,155	0/0:7,0:7:20.87:0,21,182	0/0:2,0:3:8.86:0,9,78	0/0:2,0:2:5.93:0,6,49	0/0:4,0:4:11.95:0,12,113	0/0:2,0:2:6.02:0,6,64	0/0:9,1:10:23.99:0,24,241	1/1:1,5:6:11.98:98,12,0	0/0:7,0:7:21.04:0,21,216	1/1:2,11:13:29.96:246,30,0
chr10	98001984	.	GC	G	18872.64	PASS	AB=0.696;AC=52;AF=0.963;AN=54;BaseQRankSum=-0.487;DP=534;FS=11.515;HRun=1;HaplotypeScore=223.5004;InbreedingCoeff=-0.0307;MQ=55.42;MQ0=0;MQRankSum=-3.961;QD=35.34;ReadPosRankSum=3.439;VQSLOD=2.2213;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:21:48.16:661,48,0	1/1:1,6:7:18.06:250,18,0	0/1:3,8:11:1.28:246,0,1	0/1:10,3:12:69.17:100,0,69	1/1:0,18:19:42.14:579,42,0	1/1:2,20:22:57.18:777,57,0	1/1:1,15:16:39.09:519,39,0	1/1:2,33:35:99:1439,105,0	1/1:2,16:18:54.07:702,54,0	1/1:0,23:23:66.19:900,66,0	1/1:2,19:21:48.15:643,48,0	1/1:0,24:24:66.22:914,66,0	1/1:3,26:30:90.30:1230,90,0	1/1:1,20:21:60.10:789,60,0	1/1:0,24:25:75.24:1024,75,0	1/1:2,19:21:57.15:769,57,0	1/1:0,12:12:30.08:387,30,0	1/1:0,10:9:24.08:332,24,0	1/1:2,17:19:51.17:708,51,0	1/1:2,25:27:72.23:974,72,0	1/1:2,12:14:30.09:400,30,0	1/1:0,20:20:54.09:714,54,0	1/1:2,13:15:42.13:566,42,0	1/1:0,12:12:18.05:241,18,0	1/1:1,17:19:54.18:748,54,0	1/1:2,26:28:83.72:1106,84,0	1/1:0,30:30:84.28:1156,84,0	./.
chr10	98001985	.	C	CTG	12736.66	PASS	AB=1.000;AC=52;AF=0.963;AN=54;BaseQRankSum=1.338;DP=555;FS=7.715;HRun=0;HaplotypeScore=260.4784;InbreedingCoeff=-0.0373;MQ=56.82;MQ0=0;MQRankSum=-3.733;QD=22.95;ReadPosRankSum=2.906;VQSLOD=4.2190;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:47.96:406,48,0	1/1:7,0:7:17.98:153,18,0	0/1:13,0:13:10.14:169,0,10	0/1:12,0:11:52.24:52,0,63	1/1:21,0:21:41.90:352,42,0	1/1:20,2:22:56.74:470,57,0	1/1:15,1:16:38.98:383,39,0	1/1:38,0:38:99:1128,114,0	1/1:18,0:18:53.20:518,53,0	1/1:24,0:24:64.24:559,64,0	1/1:21,0:21:47.44:385,47,0	1/1:24,0:24:65.96:595,66,0	1/1:30,0:30:86.95:819,87,0	1/1:23,0:23:59.95:539,60,0	1/1:25,0:24:74.76:679,75,0	1/1:22,2:24:57:563,57,0	1/1:12,0:12:29.71:255,30,0	1/1:12,0:10:26.98:228,27,0	1/1:20,0:20:54.01:516,54,0	1/1:27,0:27:71.93:618,72,0	1/1:14,1:17:32.72:297,33,0	1/1:20,0:20:53.97:522,54,0	1/1:15,0:14:41.74:352,42,0	1/1:14,0:14:20.74:226,21,0	1/1:20,0:20:53.96:493,54,0	1/1:26,2:28:83.92:750,84,0	1/1:30,0:30:83.83:710,84,0	./.
chr10	98005055	.	GTT	G	3473.88	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.698;DP=444;FS=15.252;HRun=7;HaplotypeScore=52.7542;InbreedingCoeff=0.9721;MQ=71.05;MQ0=0;MQRankSum=-0.368;QD=34.74;ReadPosRankSum=-0.368;VQSLOD=1.9654;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:54.17:688,54,0	0/0:7,0:7:21.07:0,21,367	0/0:8,0:8:13.61:0,14,349	0/0:8,0:7:8.98:0,9,140	0/0:28,0:28:81.26:0,81,1358	0/0:23,0:23:66.68:0,67,1096	0/0:13,0:13:36.11:0,36,603	1/1:2,29:31:87.28:1108,87,0	0/0:9,0:9:27.09:0,27,472	0/0:20,0:20:54.18:0,54,945	0/0:20,0:20:60.20:0,60,1023	0/0:7,0:7:21.07:0,21,367	0/0:21,0:21:63.22:0,63,1095	0/0:18,0:18:48.16:0,48,836	0/0:21,0:21:54.18:0,54,919	1/1:0,15:15:42.13:534,42,0	0/0:27,0:27:72.22:0,72,1228	1/1:0,11:11:30.10:379,30,0	0/0:21,0:21:47.94:0,48,839	0/0:22,0:22:60.20:0,60,1005	0/0:5,0:5:12.04:0,12,210	0/0:6,0:6:15.05:0,15,262	0/0:9,0:9:27.09:0,27,472	0/0:10,0:10:30.10:0,30,525	0/0:16,0:16:42.14:0,42,732	1/1:0,10:10:30.10:382,30,0	0/0:25,0:24:69.24:0,69,1204	1/1:3,10:13:30.09:382,30,0
chr10	98006184	.	A	AG	2992.75	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.396;DP=742;FS=0.000;HRun=2;HaplotypeScore=79.4054;InbreedingCoeff=0.9866;MQ=87.89;MQ0=0;MQRankSum=-2.940;QD=34.01;ReadPosRankSum=1.010;VQSLOD=3.7847;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,43:47:99:1726,120,0	0/0:7,0:7:21.07:0,21,260	0/0:34,0:34:96.23:0,96,1153	0/0:17,0:17:48.14:0,48,579	0/0:28,0:28:78.21:0,78,928	0/0:42,0:42:99:0,117,1383	0/0:22,0:22:66.18:0,66,793	0/0:38,0:38:99:0,105,1223	0/0:27,0:27:78.23:0,78,954	0/0:37,0:37:99:0,108,1323	0/0:22,0:22:60.17:0,60,727	0/0:33,0:33:99:0,99,1186	0/0:21,0:21:63.20:0,63,780	0/0:33,0:33:96.30:0,96,1187	0/0:37,0:37:99:0,111,1375	0/0:27,0:27:78.22:0,78,943	0/0:28,0:28:81.21:0,81,965	1/1:2,5:7:12.01:150,12,0	0/0:15,0:15:33.08:0,33,385	0/0:22,0:22:57.16:0,57,681	0/0:27,0:27:78.24:0,78,956	0/0:13,0:13:39.10:0,39,469	0/0:29,0:29:87.26:0,87,1060	0/0:23,0:23:66.21:0,66,818	0/0:23,0:23:69.19:0,69,814	1/1:2,32:34:24.94:1256,25,0	0/0:35,0:35:99:0,102,1251	0/0:14,0:14:39.12:0,39,483
chr10	98006763	.	CGT	C	1928.23	PASS	AB=0.544;AC=10;AF=0.179;AN=56;BaseQRankSum=13.303;DP=506;FS=4.325;HRun=0;HaplotypeScore=77.0447;InbreedingCoeff=0.7489;MQ=85.69;MQ0=0;MQRankSum=-13.481;QD=23.23;ReadPosRankSum=0.435;VQSLOD=3.8634;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:16:36.07:354,36,0	0/0:8,0:8:24.08:0,24,487	0/0:16,0:16:48.13:0,48,869	0/0:21,0:21:60.19:0,60,1120	0/0:22,0:22:60.21:0,60,1205	0/0:29,0:29:87.30:0,87,1764	0/0:16,0:16:48.15:0,48,939	1/1:0,19:19:57.14:601,57,0	0/0:18,0:18:54.19:0,54,1084	0/0:18,0:18:54.18:0,54,1065	0/0:28,0:28:72.25:0,72,1449	0/0:17,0:17:48.16:0,48,975	0/0:19,0:19:57.20:0,57,1142	0/0:30,0:30:87.30:0,87,1732	0/0:23,0:23:66.21:0,66,1303	0/1:2,13:15:17.17:333,0,17	0/0:25,0:25:75.26:0,75,1523	1/1:1,7:8:23.09:227,23,0	0/0:14,0:14:42.14:0,42,829	0/0:19,0:19:57.20:0,57,1158	0/0:24,0:24:72.21:0,72,1367	0/0:7,0:7:21.07:0,21,426	0/0:14,0:14:42.14:0,42,840	0/0:21,0:21:63.22:0,63,1242	0/0:12,0:12:36.12:0,36,731	0/1:4,17:21:61.44:461,0,61	0/0:22,0:22:66.23:0,66,1326	1/1:1,3:4:12.02:119,12,0
chr10	98006766	.	ATTT	A	2492.94	PASS	AB=0.536;AC=10;AF=0.179;AN=56;BaseQRankSum=13.610;DP=504;FS=0.975;HRun=3;HaplotypeScore=85.5576;InbreedingCoeff=0.7393;MQ=85.02;MQ0=0;MQRankSum=-13.205;QD=29.33;ReadPosRankSum=0.159;VQSLOD=1.1413;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:37.05:439,37,0	0/0:8,0:8:24.08:0,24,592	0/0:16,0:16:48.14:0,48,1082	0/0:20,0:20:60.20:0,60,1313	0/0:21,0:21:57.20:0,57,1383	0/0:30,0:30:90.31:0,90,2171	0/0:15,0:15:45.15:0,45,1110	1/1:2,19:21:63.18:786,63,0	0/0:18,0:18:54.19:0,54,1331	0/0:19,0:19:54.19:0,54,1332	0/0:28,0:28:69.20:0,69,1700	0/0:17,0:17:51.17:0,51,1217	0/0:19,0:19:57.20:0,57,1358	0/0:30,0:30:90.31:0,90,2215	0/0:22,0:22:66.23:0,66,1624	0/1:1,13:14:31.92:410,0,32	0/0:25,0:25:75.26:0,75,1847	1/1:3,7:10:27.01:310,27,0	0/0:14,0:14:42.14:0,42,1018	0/0:19,0:19:57.20:0,57,1405	0/0:22,0:22:66.21:0,66,1577	0/0:7,0:7:21.07:0,21,518	0/0:13,0:13:39.13:0,39,959	0/0:21,0:21:63.17:0,63,1449	0/0:12,0:12:36.12:0,36,888	0/1:4,17:21:87.79:597,0,88	0/0:23,0:23:66.23:0,66,1624	1/1:0,3:3:9.03:116,9,0
chr10	98006957	.	GT	G	1134.62	PASS	AB=0.583;AC=11;AF=0.196;AN=56;BaseQRankSum=8.485;DP=292;FS=31.782;HRun=11;HaplotypeScore=33.3356;InbreedingCoeff=0.7925;MQ=72.18;MQ0=2;MQRankSum=-3.313;QD=15.54;ReadPosRankSum=-1.592;VQSLOD=1.4953;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,7:12:20.97:172,21,0	0/0:5,0:5:9:0,9,87	0/0:11,0:7:9.02:0,9,92	0/0:12,0:8:3.01:0,3,32	0/0:14,0:14:36.09:0,36,383	0/0:15,0:15:42.11:0,42,448	0/0:5,0:5:15:0,15,143	1/1:5,20:25:56.88:462,57,0	0/0:9,1:10:21.05:0,21,223	0/0:11,0:11:21:0,21,201	0/0:10,0:10:24.05:0,24,250	0/0:4,0:4:12.03:0,12,128	0/0:8,0:8:18.05:0,18,192	0/0:12,0:12:24.01:0,24,236	0/0:6,0:6:18.05:0,18,192	0/1:2,5:7:20.01:62,0,20	0/0:13,0:12:30.02:0,30,291	1/1:2,10:12:29.94:246,30,0	0/0:16,0:16:42.11:0,42,448	0/0:12,0:12:24.06:0,24,256	0/0:8,0:8:15.04:0,15,160	0/0:9,0:9:15.03:0,15,154	0/0:6,0:6:12.03:0,12,128	0/0:10,0:10:15.04:0,15,160	0/0:9,0:9:18.05:0,18,192	1/1:2,11:13:31.23:268,31,0	0/0:13,0:13:24.06:0,24,256	1/1:0,4:4:11.99:99,12,0
chr10	98008972	.	GTA	G	1295.50	PASS	AB=0.945;AC=9;AF=0.161;AN=56;BaseQRankSum=5.735;DP=580;FS=9.461;HRun=0;HaplotypeScore=83.6086;InbreedingCoeff=0.2326;MQ=56.41;MQ0=8;MQRankSum=-2.370;QD=8.47;ReadPosRankSum=-3.946;VQSLOD=1.5724;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:33:43.62:0,44,1046	0/0:5,0:5:12.04:0,12,181	0/0:10,0:8:8.92:0,9,89	0/0:13,0:5:1.82:0,2,5	0/0:37,0:37:99:0,99,1536	0/0:23,1:24:16.69:0,17,701	0/0:19,0:19:45.14:0,45,662	1/1:17,37:54:64.87:1092,65,0	0/1:17,3:20:55.23:55,0,649	0/0:30,0:27:39.81:0,40,894	0/0:18,1:19:19.64:0,20,790	0/1:15,0:15:1.05:1,0,435	0/0:30,0:30:78.17:0,78,1131	0/1:17,1:18:38.87:39,0,419	0/0:18,0:18:42.12:0,42,649	0/0:19,0:19:41.61:0,42,196	0/0:17,0:17:38.16:0,38,571	1/1:2,0:2:0.68:1,1,0	0/0:21,1:21:12.73:0,13,691	0/0:29,1:30:40.67:0,41,1038	0/0:18,1:18:45.06:0,45,609	0/0:14,0:14:30.10:0,30,468	0/1:18,2:20:32.91:33,0,479	0/0:14,0:14:32.47:0,32,477	0/0:24,0:24:59.08:0,59,936	0/1:24,0:21:99:203,0,121	0/0:17,0:17:45.12:0,45,647	0/0:12,1:12:6.76:0,7,28
chr10	98008984	.	A	ATG	2194.07	PASS	AB=0.792;AC=7;AF=0.125;AN=56;BaseQRankSum=6.175;DP=573;FS=5.451;HRun=0;HaplotypeScore=82.7500;InbreedingCoeff=0.3982;MQ=54.66;MQ0=8;MQRankSum=-6.834;QD=15.24;ReadPosRankSum=-6.704;VQSLOD=1.5287;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:52.33:0,52,1099	0/0:4,0:4:12.04:0,12,178	0/0:6,0:4:11.93:0,12,124	0/0:9,0:2:1.79:0,2,5	0/0:35,0:35:99:0,105,1523	0/0:22,0:22:59.62:0,60,785	0/0:19,0:19:51.11:0,51,689	1/1:64,0:64:99:1530,155,0	0/1:20,0:20:17.81:18,0,650	0/0:25,0:25:70.90:0,71,962	0/0:23,0:23:53.34:0,53,848	0/0:13,0:13:38.70:0,39,528	0/0:32,0:32:93.19:0,93,1242	0/0:17,0:17:44.08:0,44,543	0/0:18,0:18:48.14:0,48,677	0/1:19,0:24:70.26:150,0,70	0/0:15,0:15:41.15:0,41,569	0/0:1,0:3:3:0,3,26	0/0:21,0:20:14.22:0,14,663	0/0:28,0:28:71.42:0,71,1135	0/0:19,0:18:50.10:0,50,636	0/0:11,0:11:33.10:0,33,475	0/0:16,0:16:7.13:0,7,535	0/0:14,0:14:32.47:0,32,457	0/0:23,0:23:62.07:0,62,924	0/1:4,19:20:10.09:563,0,10	0/0:20,0:20:60.09:0,60,750	1/1:3,0:12:3.81:66,4,0
chr10	98009246	.	A	AT	3195.48	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-13.416;DP=540;FS=31.051;HRun=6;HaplotypeScore=48.6289;InbreedingCoeff=0.9905;MQ=82.10;MQ0=0;MQRankSum=-3.175;QD=31.33;ReadPosRankSum=-1.091;VQSLOD=1.2899;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:54.17:679,54,0	0/0:6,0:6:18.04:0,18,184	0/0:17,0:17:39.08:0,39,393	0/0:12,0:12:23.80:0,24,224	0/0:34,0:34:84.18:0,84,855	0/0:15,0:15:42.08:0,42,422	0/0:15,0:15:39.08:0,39,397	1/1:4,26:30:78.23:966,78,0	0/0:17,0:17:51.12:0,51,520	0/0:28,0:28:81.18:0,81,827	0/0:13,0:13:39.07:0,39,390	0/0:18,0:18:51.11:0,51,520	0/0:23,0:23:66.13:0,66,666	0/0:21,0:21:60.13:0,60,612	0/0:19,0:19:54.12:0,54,550	1/1:0,18:18:51.16:642,51,0	0/0:28,0:28:81.14:0,81,816	1/1:1,7:8:21.07:264,21,0	0/0:13,0:13:36.08:0,36,367	0/0:37,0:37:99:0,99,1003	0/0:9,0:9:27.06:0,27,275	0/0:18,0:18:45.08:0,45,451	0/0:14,0:14:33.07:0,33,337	0/0:15,0:15:45.09:0,45,453	0/0:37,0:37:99:0,111,1127	1/1:2,18:20:54.17:679,54,0	0/0:29,0:29:87.18:0,87,880	1/1:1,5:6:12.04:151,12,0
chr10	98010079	.	CCA	C	236.91	PASS	AB=0.816;AC=10;AF=0.179;AN=56;BaseQRankSum=5.652;DP=192;FS=6.707;HRun=0;HaplotypeScore=26.8519;InbreedingCoeff=-0.2682;MQ=60.53;MQ0=11;MQRankSum=-4.462;QD=3.12;ReadPosRankSum=-2.354;VQSLOD=-0.5909;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,3:20:48.77:49,0,588	0/0:2,0:2:6.02:0,6,111	0/1:8,0:4:10.34:10,0,90	0/0:17,0:7:14.78:0,15,219	0/0:3,0:2:3.01:0,3,40	0/1:10,1:11:15.61:16,0,470	0/0:6,0:5:11.97:0,12,185	0/0:10,0:8:21.07:0,21,374	0/0:8,0:8:18.05:0,18,304	0/0:4,0:3:6.02:0,6,112	0/0:4,0:4:12.04:0,12,224	0/0:4,0:4:12.04:0,12,221	0/0:4,0:4:12.04:0,12,209	0/1:4,3:7:73.44:73,0,204	0/1:2,1:3:35.62:36,0,102	0/1:1,1:2:39.72:40,0,49	0/0:12,2:13:36.12:0,36,626	0/0:12,0:11:23.96:0,24,310	0/1:7,1:3:36.76:37,0,86	0/0:3,0:3:9.03:0,9,168	0/1:7,5:11:64.45:64,0,327	0/1:3,0:3:10.93:11,0,103	0/0:1,1:2:3.01:0,3,48	0/0:2,1:3:2.99:0,3,47	0/0:12,0:12:33.11:0,33,615	0/0:5,0:5:9.03:0,9,168	0/0:3,0:3:9.02:0,9,136	0/1:1,1:2:39.86:40,0,50
chr10	98010733	.	A	AG	6432.54	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-14.311;DP=587;FS=4.214;HRun=1;HaplotypeScore=60.7636;InbreedingCoeff=0.9986;MQ=68.61;MQ0=0;MQRankSum=-1.272;QD=39.22;ReadPosRankSum=1.996;VQSLOD=5.6086;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,55:59:99:2271,153,0	0/0:9,0:9:24.08:0,24,311	0/0:25,0:17:39.09:0,39,451	0/0:28,0:23:47.01:0,47,581	0/0:17,0:17:48.16:0,48,623	0/0:16,0:16:48.16:0,48,623	0/0:20,1:21:60.14:0,60,746	1/1:1,23:20:54.15:749,54,0	0/0:11,0:11:33.11:0,33,428	0/0:20,0:20:60.20:0,60,779	0/0:17,0:17:48.14:0,48,609	0/0:15,0:15:45.15:0,45,584	0/0:20,0:20:57.19:0,57,740	0/0:16,0:16:48.14:0,48,601	0/0:24,1:25:30.44:0,30,876	1/1:0,22:22:60.20:899,60,0	0/0:28,0:28:72.23:0,72,935	1/1:0,25:25:72.24:1079,72,0	0/0:18,0:18:45.15:0,45,584	0/0:19,0:19:54.18:0,54,701	0/0:27,0:27:81.26:0,81,1050	0/0:17,0:17:51.15:0,51,648	0/0:15,0:15:45.15:0,45,584	0/0:19,0:19:57.17:0,57,725	0/0:17,0:17:51.16:0,51,657	1/1:0,25:25:75.25:1120,75,0	0/0:23,0:23:69.22:0,69,895	1/1:0,9:9:21.07:314,21,0
chr10	98014311	.	TC	T	553.19	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=6.782;DP=585;FS=0.000;HRun=4;HaplotypeScore=61.2945;InbreedingCoeff=0.7757;MQ=79.44;MQ0=0;MQRankSum=-0.529;QD=14.95;ReadPosRankSum=-1.097;VQSLOD=2.3179;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:54.16:648,54,0	0/0:9,0:9:27.09:0,27,378	0/0:12,0:12:29.05:0,29,338	0/1:15,0:15:0.71:1,0,157	0/0:31,0:31:93.31:0,93,1295	0/0:20,0:20:57.16:0,57,762	0/0:18,0:18:51.17:0,51,712	0/0:26,0:26:69.23:0,69,964	0/0:23,0:23:66.20:0,66,892	0/0:22,0:22:60.20:0,60,839	0/0:29,0:29:87.29:0,87,1217	0/0:18,0:18:54.18:0,54,756	0/0:29,0:29:81.25:0,81,1116	0/0:12,0:12:36.12:0,36,503	0/0:18,0:18:51.17:0,51,714	0/0:27,0:27:78.24:0,78,1059	0/0:22,0:22:63.21:0,63,873	0/0:25,0:25:75.24:0,75,1032	0/0:15,0:15:45.15:0,45,630	0/0:29,0:29:84.28:0,84,1172	0/0:11,0:11:33.11:0,33,461	0/0:18,0:18:51.16:0,51,697	0/0:16,0:16:48.16:0,48,671	0/0:14,0:14:42.13:0,42,572	0/0:24,0:24:72.24:0,72,1006	0/0:32,0:32:96.32:0,96,1342	0/0:30,0:30:87.26:0,87,1194	0/0:18,0:18:51.17:0,51,714
chr10	98015999	.	AT	A	1034.14	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=1.586;DP=358;FS=13.391;HRun=6;HaplotypeScore=42.5265;InbreedingCoeff=0.8160;MQ=70.01;MQ0=0;MQRankSum=1.244;QD=24.05;ReadPosRankSum=-3.131;VQSLOD=1.2494;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.16:0,54,694	0/0:4,0:4:12.04:0,12,158	0/0:7,1:8:12.08:0,12,105	0/0:7,0:7:6.22:0,6,112	0/0:23,0:23:66.16:0,66,829	0/0:15,0:15:39.13:0,39,511	0/0:6,0:6:18.06:0,18,237	1/1:2,27:29:81.20:864,81,0	0/0:7,0:7:21.07:0,21,276	0/0:15,0:15:45.15:0,45,592	0/0:19,0:19:48.10:0,48,597	0/0:9,0:9:18.06:0,18,236	0/0:10,0:10:27.09:0,27,354	0/0:14,0:14:39.09:0,39,494	0/0:10,0:10:30.10:0,30,394	0/0:16,0:16:45.15:0,45,592	0/0:23,0:23:54.15:0,54,688	0/0:25,0:25:72.21:0,72,930	0/0:18,0:18:51.16:0,51,657	0/0:14,0:14:39.13:0,39,513	0/0:4,0:4:12.04:0,12,158	./.	0/0:1,0:1:3.01:0,3,39	0/0:4,0:4:12.04:0,12,158	0/0:13,0:13:39.11:0,39,496	0/0:16,0:16:45.14:0,45,579	0/0:16,0:16:45.15:0,45,592	1/1:2,12:14:27.07:290,27,0
chr10	98018142	.	CTGTGTGTG	C	1597.50	PASS	AB=0.581;AC=9;AF=0.161;AN=56;BaseQRankSum=7.746;DP=449;FS=2.522;HRun=0;HaplotypeScore=114.9296;InbreedingCoeff=0.7002;MQ=63.92;MQ0=8;MQRankSum=-3.533;QD=23.84;ReadPosRankSum=-1.754;VQSLOD=3.2142;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,2:8:2.98:21,3,0	0/0:10,0:10:25.74:0,26,881	0/0:21,0:13:8.06:0,8,172	0/0:19,0:16:21.07:0,21,628	0/0:23,0:22:48.13:0,48,1580	0/0:19,0:19:39.12:0,39,1431	0/0:9,0:9:24.07:0,24,843	1/1:11,13:24:35.97:580,36,0	0/0:13,0:12:18.06:0,18,726	0/0:18,0:17:38.97:0,39,1092	0/0:14,0:14:27.08:0,27,957	0/0:18,0:18:27.56:0,28,930	0/0:14,0:14:27.56:0,28,911	0/0:18,0:17:45.14:0,45,1667	0/0:11,0:13:12.04:0,12,404	1/1:6,1:7:3:30,3,0	0/0:20,0:20:36.12:0,36,1442	0/0:10,0:11:8.37:0,8,352	0/0:15,0:14:13.53:0,14,659	0/0:17,0:16:27.08:0,27,891	0/0:14,0:14:24.08:0,24,934	0/0:18,0:18:36.12:0,36,1299	0/0:14,0:14:27.09:0,27,995	0/0:20,0:18:31.58:0,32,1138	0/0:22,0:23:59.86:0,60,2269	0/1:7,18:24:68.44:876,0,68	0/0:20,0:20:39.12:0,39,1254	1/1:0,3:3:9.03:232,9,0
chr10	98018296	.	CTG	C	2218.11	PASS	AB=0.532;AC=7;AF=0.125;AN=56;BaseQRankSum=9.541;DP=558;FS=14.134;HRun=0;HaplotypeScore=57.1660;InbreedingCoeff=0.7646;MQ=53.99;MQ0=14;MQRankSum=-2.712;QD=30.81;ReadPosRankSum=0.264;VQSLOD=4.1336;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:21:48.10:684,48,0	0/0:10,0:10:24.08:0,24,454	0/0:28,0:6:9.03:0,9,131	0/0:17,0:1:3.01:0,3,57	0/0:28,0:27:72.23:0,72,1311	0/0:29,0:29:87.28:0,87,1601	0/0:14,0:14:42.13:0,42,738	0/0:22,0:14:36.12:0,36,653	0/0:20,0:20:57.17:0,57,1045	0/0:28,0:27:75.25:0,75,1389	0/0:22,0:22:60.20:0,60,1096	0/0:20,0:20:60.17:0,60,1072	0/0:15,0:15:45.14:0,45,811	0/0:27,0:27:81.23:0,81,1448	0/0:22,0:22:60.19:0,60,1085	1/1:1,15:16:39.03:596,39,0	0/0:18,0:17:45.10:0,45,814	1/1:0,8:5:12.04:183,12,0	0/0:20,0:13:33.11:0,33,625	0/0:12,0:12:36.12:0,36,679	0/0:18,0:17:45.15:0,45,852	0/0:18,0:18:51.17:0,51,932	0/0:21,0:21:60.21:0,60,1131	0/0:20,0:20:54.13:0,54,984	0/0:29,0:29:75.23:0,75,1321	0/1:3,22:25:38.31:900,0,38	0/0:18,0:18:54.19:0,54,1022	0/0:9,0:9:27.07:0,27,477
chr10	98018956	.	AG	A	1274.10	PASS	AB=0.768;AC=10;AF=0.179;AN=56;BaseQRankSum=11.844;DP=565;FS=0.445;HRun=2;HaplotypeScore=69.6252;InbreedingCoeff=0.7495;MQ=63.20;MQ0=3;MQRankSum=-2.480;QD=10.28;ReadPosRankSum=0.618;VQSLOD=1.4711;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,25:43:15.74:557,16,0	0/0:10,0:10:27.08:0,27,385	0/0:26,1:15:38.26:0,38,556	0/0:9,0:8:24.02:0,24,314	0/0:19,0:19:54.17:0,54,779	0/0:19,0:19:57.18:0,57,832	0/0:14,0:14:42.10:0,42,602	1/1:16,0:16:38.11:231,38,0	0/0:18,0:18:54.18:0,54,806	0/0:19,0:19:57.17:0,57,799	0/0:25,0:25:66.18:0,66,919	0/0:15,0:15:45.13:0,45,635	0/0:18,0:18:51.13:0,51,703	0/0:12,0:12:33.11:0,33,488	0/0:9,0:9:27.04:0,27,342	0/1:3,8:11:24.90:163,0,25	0/0:24,0:22:63.08:0,63,861	1/1:24,0:24:50.44:336,50,0	0/0:11,0:10:27.09:0,27,403	0/0:21,0:21:63.18:0,63,899	0/0:33,0:33:96.29:0,96,1364	0/0:26,0:26:75.23:0,75,1080	0/0:27,0:27:81.22:0,81,1122	0/0:34,0:34:99:0,102,1439	0/0:22,0:22:63.20:0,63,923	0/1:21,1:22:58.97:59,0,114	0/0:29,0:29:87.21:0,87,1180	1/1:8,0:8:17.15:96,17,0
chr10	98018957	.	GGT	G	1669.18	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=10.060;DP=574;FS=1.537;HRun=0;HaplotypeScore=80.5987;InbreedingCoeff=0.4721;MQ=63.07;MQ0=3;MQRankSum=-1.874;QD=16.36;ReadPosRankSum=1.187;VQSLOD=3.7393;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:42:44.81:576,0,45	0/0:10,0:10:27.08:0,27,511	0/0:28,0:15:38.30:0,38,730	0/0:9,0:8:24.08:0,24,407	0/0:20,0:20:57.18:0,57,1076	0/0:20,0:20:60.20:0,60,1166	0/0:14,0:14:42.10:0,42,801	1/1:1,0:17:2.21:125,2,0	0/0:19,0:19:53.91:0,54,1091	0/0:19,0:19:57.18:0,57,1070	0/0:26,0:26:69.20:0,69,1226	0/0:15,0:15:45.13:0,45,840	0/0:17,0:17:51.15:0,51,957	0/0:11,0:11:33.11:0,33,659	0/0:9,0:9:27.09:0,27,506	0/1:11,0:11:47.40:187,0,47	0/0:24,0:22:62.88:0,63,1246	1/1:0,23:23:51.17:828,51,0	0/0:12,0:11:33.02:0,33,588	0/0:22,0:22:66.21:0,66,1261	0/0:34,0:34:99:0,102,1889	0/0:28,0:28:81.26:0,81,1528	0/0:28,0:28:84.27:0,84,1601	0/0:34,0:34:99:0,102,1945	0/0:22,0:22:63.21:0,63,1229	0/0:22,0:22:26.27:0,26,326	0/0:29,0:29:87.25:0,87,1574	0/1:5,0:9:5.67:85,0,6
chr10	98018965	.	TTG	T	1100.99	PASS	AB=0.825;AC=6;AF=0.107;AN=56;BaseQRankSum=9.328;DP=576;FS=0.501;HRun=0;HaplotypeScore=82.9963;InbreedingCoeff=0.2010;MQ=59.78;MQ0=6;MQRankSum=-1.043;QD=10.10;ReadPosRankSum=-0.878;VQSLOD=3.0578;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,23:46:3.11:812,0,3	0/0:11,0:11:32.98:0,33,461	0/0:24,0:11:32.90:0,33,404	0/0:9,0:7:18:0,18,182	0/0:20,0:20:55.03:0,55,824	0/0:22,0:22:59.98:0,60,950	0/0:13,0:13:36.10:0,36,584	1/1:21,0:17:0.30:56,0,0	0/0:20,0:20:60.13:0,60,928	0/0:19,0:19:54.14:0,54,867	0/0:23,0:23:60.15:0,60,871	0/0:15,0:15:45.09:0,45,658	0/0:17,0:17:51.14:0,51,816	0/0:12,0:12:36.08:0,36,541	0/0:7,0:7:21.05:0,21,293	0/1:5,7:12:33.79:231,0,34	0/0:22,0:21:59.85:0,60,995	0/0:24,0:24:12.45:0,12,68	0/0:17,0:14:39:0,39,516	0/0:24,0:24:66.18:0,66,1033	0/0:37,0:37:87.34:0,87,1473	0/0:29,0:29:77.94:0,78,1188	0/0:27,0:27:78.18:0,78,1234	0/0:31,0:31:93.28:0,93,1511	0/0:21,0:21:60.18:0,60,981	0/1:24,0:24:72.57:73,0,222	0/0:23,0:23:69.11:0,69,945	0/1:6,0:6:47.42:47,0,76
chr10	98018966	.	TG	T	981.23	PASS	AB=0.892;AC=6;AF=0.107;AN=56;BaseQRankSum=10.873;DP=572;FS=1.581;HRun=1;HaplotypeScore=71.8375;InbreedingCoeff=0.2514;MQ=59.75;MQ0=6;MQRankSum=-3.271;QD=9.26;ReadPosRankSum=-1.705;VQSLOD=0.6220;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:43,1:44:91.12:514,0,91	0/0:11,0:11:32.97:0,33,381	0/0:24,0:11:32.87:0,33,377	0/0:9,0:7:17.50:0,17,148	0/0:20,0:20:55.06:0,55,706	0/0:21,0:21:59.93:0,60,787	0/0:13,0:13:36.11:0,36,484	1/1:18,2:16:34.99:207,35,0	0/0:20,0:20:57.64:0,58,750	0/0:19,0:19:54.15:0,54,716	0/0:23,0:23:60.19:0,60,771	0/0:15,0:15:45.10:0,45,555	0/0:17,0:17:51.14:0,51,667	0/0:12,0:12:36.08:0,36,447	0/0:7,0:7:21.05:0,21,256	0/1:11,1:12:32.61:150,0,33	0/0:22,0:21:60.12:0,60,806	0/0:24,0:24:53.96:0,54,284	0/0:18,0:15:41.97:0,42,479	0/0:24,0:24:66.20:0,66,867	0/0:35,0:35:92.99:0,93,1254	0/0:27,0:27:78.24:0,78,1014	0/0:27,0:27:78.20:0,78,1020	0/0:31,0:31:93.30:0,93,1251	0/0:22,0:22:63.18:0,63,832	0/1:24,0:24:46.97:165,0,47	0/0:25,0:25:75.15:0,75,898	0/1:3,3:6:39.64:76,0,40
chr10	98021581	.	C	CTT	255.33	PASS	AB=0.767;AC=1;AF=0.018;AN=56;BaseQRankSum=4.517;DP=606;FS=6.053;HRun=2;HaplotypeScore=75.1699;InbreedingCoeff=-0.0183;MQ=96.07;MQ0=0;MQRankSum=4.405;QD=11.10;ReadPosRankSum=-2.496;VQSLOD=-0.3099;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.13:0,51,698	0/0:8,0:8:24.05:0,24,329	0/1:16,7:23:99:330,0,502	0/0:33,0:34:83.99:0,84,1139	0/0:32,0:32:90.26:0,90,1282	0/0:24,0:24:66.19:0,66,931	0/0:16,0:16:39.12:0,39,555	0/0:26,0:26:75.22:0,75,1034	0/0:24,0:24:72.23:0,72,1041	0/0:21,0:21:57.19:0,57,837	0/0:21,0:21:57.19:0,57,839	0/0:21,0:21:63.20:0,63,899	0/0:28,0:28:78.26:0,78,1148	0/0:20,0:20:57.18:0,57,820	0/0:30,0:30:90.29:0,90,1305	0/0:22,0:22:63.21:0,63,927	0/0:15,0:15:45.12:0,45,640	0/0:25,0:25:69.21:0,69,989	0/0:14,0:14:42.14:0,42,619	0/0:20,0:20:60.20:0,60,881	0/0:19,0:19:54.16:0,54,775	0/0:14,0:14:42.14:0,42,618	0/0:22,0:22:63.21:0,63,927	0/0:17,0:17:51.14:0,51,711	0/0:12,0:12:36.12:0,36,530	0/0:29,0:29:87.29:0,87,1281	0/0:38,0:38:99:0,105,1493	0/0:14,0:13:42.14:0,42,618
chr10	98022453	.	TTG	T	211.74	PASS	AB=0.928;AC=11;AF=0.204;AN=54;BaseQRankSum=3.459;DP=876;FS=1.351;HRun=0;HaplotypeScore=243.3430;InbreedingCoeff=-0.0583;MQ=48.05;MQ0=13;MQRankSum=-2.613;QD=0.63;ReadPosRankSum=-1.605;VQSLOD=2.4240;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:22:10.99:0,11,71	0/0:19,0:19:14.45:0,14,189	./.	0/0:32,0:24:6.02:0,6,75	0/0:71,2:73:33.91:0,34,519	0/0:24,1:25:24.06:0,24,328	0/0:32,1:33:22.82:0,23,676	1/1:27,0:27:6.01:45,6,0	0/0:23,0:22:34.94:0,35,467	0/0:39,0:37:19.62:0,20,326	0/1:43,1:44:11.57:12,0,157	0/0:19,0:22:3.92:0,4,192	0/0:32,0:31:23.85:0,24,331	0/0:36,0:35:10.30:0,10,501	0/1:17,3:20:55.41:55,0,239	0/0:10,0:7:0:0,0,1	0/0:22,0:22:30.75:0,31,472	0/0:12,0:11:16.54:0,17,154	0/0:24,0:22:23.93:0,24,304	0/1:48,1:48:11.50:11,0,200	0/1:39,7:42:99:103,0,783	0/0:38,0:38:16.88:0,17,232	0/1:36,2:38:31.61:32,0,193	0/1:26,4:30:27.85:28,0,562	0/1:45,3:48:30.09:30,0,206	0/0:43,0:37:34.11:0,34,304	0/1:23,0:22:11.75:12,0,223	0/1:8,1:9:15.33:26,0,15
chr10	98022466	.	T	TG	902.63	PASS	AB=0.935;AC=14;AF=0.250;AN=56;BaseQRankSum=12.150;DP=924;FS=120.444;HRun=1;HaplotypeScore=285.0512;InbreedingCoeff=-0.1975;MQ=36.85;MQ0=27;MQRankSum=-9.844;QD=2.52;ReadPosRankSum=-3.531;VQSLOD=-0.3012;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:21:0.49:0,0,128	0/0:18,1:18:1.03:0,1,328	0/0:25,0:5:9.03:0,9,115	0/0:36,0:17:51.14:0,51,633	0/0:81,5:85:15.60:0,16,511	0/0:24,1:25:7.06:0,7,324	0/0:36,0:36:74.31:0,74,913	0/1:27,2:28:96.95:97,0,536	0/1:22,2:23:14.87:15,0,494	0/1:41,3:42:99:216,0,959	0/0:45,4:49:25.89:0,26,339	0/0:19,2:21:25.64:0,26,354	0/1:27,2:27:45.41:45,0,467	0/0:31,4:35:27.77:0,28,687	0/1:20,1:22:30.34:30,0,330	1/1:11,1:8:2.73:18,3,0	0/1:18,2:21:27.43:27,0,491	0/1:12,0:11:34.58:35,0,238	0/1:26,0:21:3.98:4,0,526	0/0:42,7:47:13.58:0,14,556	0/0:48,0:42:95.77:0,96,1121	0/0:38,2:41:26.83:0,27,316	0/1:42,1:43:0.30:0,0,307	0/0:29,0:30:56.52:0,57,689	0/0:50,3:52:0.02:0,0,434	0/1:39,8:40:99:497,0,676	0/1:21,2:21:57.10:57,0,307	0/0:11,0:11:21.85:0,22,210
chr10	98022513	.	TAC	T	1274.39	PASS	AB=0.815;AC=23;AF=0.411;AN=56;BaseQRankSum=9.244;DP=692;FS=2.387;HRun=0;HaplotypeScore=237.6421;InbreedingCoeff=-0.4744;MQ=38.78;MQ0=21;MQRankSum=-6.278;QD=2.52;ReadPosRankSum=0.336;VQSLOD=2.7547;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,1:14:23.41:23,0,43	0/1:7,2:10:38.99:39,0,80	0/0:50,0:6:13.73:0,14,131	0/0:40,0:3:1.55:0,2,4	0/1:39,13:55:23.99:24,0,70	0/1:18,6:24:46.18:46,0,112	0/1:23,3:26:27.07:27,0,157	0/0:15,2:14:9.05:0,9,358	0/1:18,3:21:12.09:12,0,155	0/1:18,8:27:99:212,0,359	1/1:20,8:32:6.77:44,7,0	0/1:17,3:20:73.81:74,0,154	0/1:17,9:25:3.86:180,0,4	0/1:26,3:29:36.94:37,0,144	0/1:14,3:17:35.92:36,0,38	0/0:10,0:9:2.35:0,2,10	0/0:14,3:17:15.60:0,16,156	0/1:5,0:6:24.82:25,0,74	0/1:18,3:21:90.90:91,0,422	0/1:13,7:21:28.12:29,0,28	0/0:28,0:27:7.80:0,8,219	0/1:23,5:31:12.47:87,0,12	0/1:25,7:34:34.56:98,0,35	0/0:20,1:21:0.22:0,0,87	0/1:20,5:28:10.89:88,0,11	0/1:24,4:23:99:104,0,239	0/1:13,3:17:59.13:59,0,87	1/1:9,1:10:5.55:93,6,0
chr10	98022522	.	G	GTA	48.46	PASS	AB=0.974;AC=13;AF=0.232;AN=56;BaseQRankSum=4.827;DP=587;FS=9.299;HRun=0;HaplotypeScore=224.8090;InbreedingCoeff=0.1561;MQ=39.74;MQ0=12;MQRankSum=-4.637;QD=0.18;ReadPosRankSum=1.355;VQSLOD=1.6248;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:14:0.35:0,0,0	0/0:10,0:10:11.73:0,12,147	0/0:34,0:4:10.08:0,10,67	0/0:23,0:3:1.82:0,2,5	0/1:50,0:49:0.46:0,0,43	0/0:20,0:20:2.87:0,3,43	0/1:22,1:23:62.27:62,0,119	0/0:16,1:13:26.68:0,27,408	0/0:19,1:20:9.25:0,9,167	0/1:24,0:23:4.40:4,0,441	0/1:30,0:30:0.30:1,0,0	0/0:19,1:20:7.16:0,7,56	1/1:22,1:22:0.80:2,1,0	0/0:26,0:26:2.48:0,2,43	0/1:15,0:15:0.09:0,0,0	0/1:9,1:8:0:0,0,0	0/0:12,0:12:2.75:0,3,35	0/0:6,0:5:3.45:0,3,63	0/0:20,0:19:20.11:0,20,480	0/1:20,0:19:0.01:2,0,0	0/0:24,0:24:21:0,21,272	1/1:27,0:27:2.80:14,3,0	0/0:30,0:31:0.14:0,0,2	0/0:18,1:19:3.01:0,3,44	0/0:19,0:20:0.76:0,1,4	0/1:23,1:20:59.46:59,0,244	0/1:15,1:16:3.83:4,0,55	0/0:6,0:6:4.06:0,4,31
chr10	98022774	.	C	CTT	1971.81	PASS	AC=44;AF=1.000;AN=44;BaseQRankSum=0.681;DP=186;FS=0.000;HRun=0;HaplotypeScore=113.6060;InbreedingCoeff=-0.0175;MQ=33.14;MQ0=0;MQRankSum=-1.306;QD=12.56;ReadPosRankSum=1.704;VQSLOD=3.4676;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,6:7:13.94:86,14,0	1/1:0,5:5:14.49:78,14,0	./.	./.	./.	1/1:0,6:6:5.91:48,6,0	1/1:0,4:4:11.63:63,12,0	1/1:0,11:11:32.19:220,32,0	1/1:0,3:3:8.81:58,9,0	1/1:0,10:10:28.57:146,29,0	1/1:0,12:12:20.24:132,20,0	1/1:0,2:2:2.98:21,3,0	1/1:1,3:4:8.58:44,9,0	1/1:0,8:8:23.34:134,23,0	1/1:0,2:2:5.78:31,6,0	1/1:0,3:3:8.89:59,9,0	1/1:0,9:9:20.08:103,20,0	1/1:1,5:6:14.84:108,15,0	1/1:0,4:5:14.27:81,14,0	1/1:0,19:19:26.22:149,26,0	./.	1/1:0,4:4:11.58:62,12,0	./.	1/1:0,1:1:2.92:17,3,0	1/1:0,10:9:26.07:138,26,0	1/1:10,1:11:21.23:125,21,0	1/1:0,15:15:26.17:145,26,0	./.
chr10	98022779	.	C	CT	6553.67	PASS	AC=50;AF=1.000;AN=50;DP=240;FS=0.000;HRun=0;HaplotypeScore=113.2760;InbreedingCoeff=-0.0277;MQ=33.61;MQ0=2;QD=27.77;VQSLOD=4.7830;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:23.46:272,23,0	1/1:7,0:7:18.06:285,18,0	./.	./.	1/1:2,16:18:6.02:69,6,0	1/1:7,0:7:9.03:142,9,0	1/1:8,0:8:18.06:267,18,0	1/1:12,0:11:33.11:505,33,0	1/1:3,0:3:9.03:137,9,0	1/1:11,0:10:30.10:476,30,0	1/1:14,0:14:27.09:404,27,0	1/1:2,0:2:3.01:37,3,0	1/1:4,0:4:12.04:173,12,0	1/1:9,0:9:27.09:425,27,0	1/1:2,0:2:6.01:76,6,0	1/1:7,0:6:12.04:163,12,0	1/1:10,0:10:21.06:330,21,0	1/1:9,0:9:18.06:277,18,0	1/1:9,0:9:24.04:349,24,0	1/1:21,0:20:30.09:413,30,0	1/1:3,0:3:2.92:17,3,0	1/1:5,0:5:12.04:190,12,0	1/1:3,15:18:9.02:94,9,0	1/1:2,0:2:3.01:47,3,0	1/1:13,0:12:36.12:548,36,0	1/1:15,0:14:29.58:408,30,0	1/1:17,0:17:30.10:451,30,0	./.
chr10	98022785	.	T	TT	977.21	PASS	AB=1.000;AC=43;AF=0.896;AN=48;BaseQRankSum=3.757;DP=276;FS=0.000;HRun=4;HaplotypeScore=113.1406;InbreedingCoeff=0.1551;MQ=39.35;MQ0=2;MQRankSum=-2.100;QD=3.70;ReadPosRankSum=2.241;VQSLOD=-0.2870;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:13:45,13,0	1/1:8,0:8:13.34:54,13,0	./.	./.	1/1:22,0:22:0.47:1,0,0	1/1:10,0:10:5.42:23,5,0	0/1:9,0:9:9.09:32,0,9	1/1:12,0:11:19.25:59,19,0	1/1:3,0:3:7.71:30,8,0	1/1:12,0:11:16.59:58,17,0	1/1:15,0:15:19.37:92,19,0	./.	1/1:5,0:5:8.36:40,8,0	1/1:11,0:11:22.12:99,22,0	1/1:2,0:2:2.68:11,3,0	1/1:6,0:5:7.21:27,7,0	1/1:13,0:13:0.67:53,1,0	0/1:8,0:8:1.42:20,0,1	0/1:11,0:11:13.22:13,0,36	1/1:24,0:23:16.13:71,16,0	0/1:3,0:3:0:0,0,0	1/1:6,0:6:10.95:47,11,0	0/1:19,0:19:0:0,0,0	1/1:3,0:3:2.74:12,3,0	1/1:16,0:15:27.57:109,28,0	1/1:2,11:15:20.38:81,20,0	1/1:17,0:17:22.52:92,23,0	./.
chr10	98022789	.	C	CTTTT	781.79	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=2.548;DP=305;FS=10.238;HRun=10;HaplotypeScore=124.0299;InbreedingCoeff=0.7784;MQ=39.71;MQ0=5;MQRankSum=-1.149;QD=10.86;ReadPosRankSum=0.242;VQSLOD=0.0773;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,5:14:12.72:204,13,0	0/0:9,0:9:24.05:0,24,318	1/1:11,0:3:0.47:1,0,0	0/0:7,0:1:2.80:0,3,13	0/0:22,0:21:26.96:0,27,287	0/0:9,0:9:15.01:0,15,188	0/0:9,0:9:18.03:0,18,227	1/1:11,0:10:8.15:47,8,0	0/0:3,0:3:5.98:0,6,83	0/0:12,0:11:20.75:0,21,252	0/0:16,0:16:33.08:0,33,395	0/0:2,0:2:2.90:0,3,16	0/0:7,0:7:14.97:0,15,160	0/0:13,0:13:38.99:0,39,470	0/0:2,0:2:2.80:0,3,14	1/1:2,0:7:12.04:151,12,0	0/0:12,0:13:38.99:0,39,467	1/1:1,0:10:12.04:156,12,0	0/0:13,0:13:32.90:0,33,351	0/0:25,0:24:41.99:0,42,516	0/0:5,0:5:14.75:0,15,134	0/0:7,0:7:18.02:0,18,235	0/0:20,0:20:14.99:0,15,169	0/0:4,0:4:9.01:0,9,100	0/0:16,0:15:29.53:0,30,388	1/1:18,0:17:38.92:382,39,0	0/0:17,0:17:33.10:0,33,435	./.
chr10	98023476	.	GC	G	1024.69	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.093;DP=715;FS=4.445;HRun=3;HaplotypeScore=68.9928;InbreedingCoeff=0.9691;MQ=85.83;MQ0=0;MQRankSum=-0.121;QD=33.05;ReadPosRankSum=-4.284;VQSLOD=2.1350;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,1986	0/0:11,0:11:33.07:0,33,436	0/0:27,0:27:78.23:0,78,1072	0/0:20,0:20:51.17:0,51,722	0/0:22,0:22:57.18:0,57,803	0/0:23,0:23:63.20:0,63,890	0/0:24,0:24:66.21:0,66,931	1/1:0,28:28:84.25:1027,84,0	0/0:25,0:25:75.25:0,75,1078	0/0:31,0:30:93.31:0,93,1321	0/0:20,0:20:60.18:0,60,827	0/0:25,0:25:69.23:0,69,993	0/0:38,0:38:99:0,114,1638	0/0:26,0:26:78.26:0,78,1121	0/0:43,0:43:99:0,126,1773	0/0:29,0:29:87.29:0,87,1251	0/0:27,0:27:81.26:0,81,1149	0/0:30,0:30:84.28:0,84,1210	0/0:15,0:15:42.14:0,42,605	0/0:23,0:23:69.23:0,69,986	0/0:35,0:35:99:0,105,1493	0/0:20,0:20:60.19:0,60,845	0/0:18,0:18:54.17:0,54,757	0/0:32,0:32:96.31:0,96,1362	0/0:17,0:17:51.15:0,51,699	0/0:24,0:24:69.22:0,69,976	0/0:30,0:30:90.29:0,90,1275	1/1:0,3:3:9.03:112,9,0
chr10	98024086	.	AGT	A	1109.63	PASS	AB=0.906;AC=41;AF=0.891;AN=46;BaseQRankSum=0.622;DP=592;FS=0.000;HRun=0;HaplotypeScore=87.1053;InbreedingCoeff=0.1733;MQ=63.30;MQ0=5;MQRankSum=0.276;QD=2.45;ReadPosRankSum=0.507;VQSLOD=1.7474;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:30:2.84:14,3,0	1/1:7,2:9:3.01:32,3,0	./.	./.	1/1:15,2:19:8.85:78,9,0	0/0:16,0:16:17.17:0,17,140	1/1:16,4:19:6.02:63,6,0	./.	1/1:18,4:22:3.01:32,3,0	1/1:24,0:24:3:27,3,0	1/1:12,4:16:2.97:32,3,0	1/1:14,1:17:8.85:77,9,0	1/1:18,2:20:12.83:98,13,0	1/1:19,0:19:8.92:62,9,0	1/1:24,3:28:20.86:190,21,0	1/1:19,0:32:16.69:81,17,0	0/1:26,2:29:11.85:130,0,12	1/1:14,0:15:2.84:14,3,0	./.	1/1:11,3:14:3.01:32,3,0	1/1:40,0:36:3.47:27,3,0	1/1:13,0:14:5.66:28,6,0	0/0:12,2:14:0:0,0,0	1/1:21,10:31:11.98:114,12,0	./.	1/1:19,0:20:5.68:28,6,0	1/1:21,2:23:3.01:32,3,0	1/1:7,0:7:3:26,3,0
chr10	98033730	.	G	GA	929.22	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.411;DP=542;FS=4.491;HRun=8;HaplotypeScore=59.6125;InbreedingCoeff=0.8776;MQ=85.62;MQ0=0;MQRankSum=1.913;QD=27.33;ReadPosRankSum=-3.971;VQSLOD=2.7669;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:41.91:0,42,366	0/0:8,0:8:15.01:0,15,137	0/0:33,1:33:19.82:0,20,318	0/0:20,0:18:45:0,45,403	0/0:21,0:21:51.02:0,51,467	0/0:21,0:21:51.01:0,51,462	0/0:18,0:18:48:0,48,433	1/1:1,29:29:87.26:1003,87,0	0/0:5,0:5:15.01:0,15,137	0/0:24,0:24:60.03:0,60,549	0/0:18,0:18:45.02:0,45,412	0/0:17,0:17:42.01:0,42,384	0/0:14,0:14:35.99:0,36,320	0/0:21,0:21:47.98:0,48,434	0/0:17,0:17:48.02:0,48,439	0/0:6,0:6:18.01:0,18,164	0/0:29,0:29:68.99:0,69,625	0/0:9,0:9:21.01:0,21,192	0/0:17,0:17:33.02:0,33,302	0/0:26,0:26:54.01:0,54,494	0/0:17,0:16:39.01:0,39,357	0/0:20,0:20:51.02:0,51,467	0/0:21,0:21:56.69:0,57,511	0/0:23,0:23:54:0,54,488	0/0:20,0:20:57.01:0,57,516	0/0:30,1:31:63:0,63,573	0/0:27,0:27:45.67:0,46,605	1/1:3,1:4:3.01:35,3,0
chr10	98033758	.	AAC	A	365.64	PASS	AB=0.926;AC=12;AF=0.222;AN=54;BaseQRankSum=1.784;DP=550;FS=0.000;HRun=0;HaplotypeScore=72.2787;InbreedingCoeff=0.0451;MQ=60.66;MQ0=6;MQRankSum=0.234;QD=1.65;ReadPosRankSum=-1.425;VQSLOD=0.8419;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:25:11.79:0,12,104	0/0:6,0:6:15.03:0,15,200	./.	0/0:23,0:13:6.02:0,6,86	0/1:21,5:26:63.13:63,0,480	0/1:20,1:21:16.87:17,0,350	0/0:22,0:22:7.23:0,7,305	1/1:27,1:27:9.17:124,9,0	0/0:9,0:9:27.09:0,27,391	0/0:26,0:26:7.40:0,7,411	0/0:20,0:20:12.63:0,13,432	0/1:18,1:19:37.01:37,0,274	0/0:12,0:12:18.03:0,18,246	0/0:20,0:19:39.13:0,39,587	0/0:17,0:17:30.10:0,30,454	0/0:12,0:10:2.99:0,3,24	0/1:23,2:25:53.48:53,0,364	0/0:8,0:8:6.85:0,7,46	0/1:16,1:16:36.63:37,0,206	0/1:21,3:24:40.44:40,0,471	0/0:14,0:14:26.86:0,27,351	0/0:19,0:19:24.06:0,24,337	0/0:25,1:28:17.76:0,18,652	0/0:19,0:19:29.58:0,30,422	0/0:25,0:25:16:0,16,556	0/1:26,3:29:22.03:22,0,492	0/1:28,0:28:24.09:24,0,472	1/1:0,5:5:9.02:100,9,0
chr10	98034293	.	C	CT	511.19	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-2.269;DP=326;FS=2.355;HRun=10;HaplotypeScore=41.9946;InbreedingCoeff=0.8970;MQ=62.68;MQ0=0;MQRankSum=-0.793;QD=17.63;ReadPosRankSum=-1.720;VQSLOD=3.3070;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:47.91:0,48,390	0/0:11,0:11:23.94:0,24,193	0/0:5,0:5:8.92:0,9,70	0/0:7,0:6:11.94:0,12,93	0/0:14,0:14:35.96:0,36,296	0/0:8,0:8:20.97:0,21,172	0/0:4,0:5:11:0,11,77	0/0:22,0:21:53.89:0,54,435	0/0:8,0:8:17.97:0,18,148	0/0:16,0:16:26.92:0,27,220	0/0:9,0:9:20.97:0,21,172	0/0:15,0:15:41.95:0,42,345	0/0:14,0:14:35.94:0,36,292	0/0:9,0:9:23.97:0,24,197	0/0:11,0:11:17.97:0,18,148	1/1:2,8:10:24.05:248,24,0	0/0:14,0:14:35.85:0,36,282	1/1:2,4:6:9.02:96,9,0	0/0:12,0:13:38:0,38,301	0/0:12,0:12:23.93:0,24,197	0/0:11,0:11:20.95:0,21,169	0/0:8,0:8:20.97:0,21,172	0/0:13,0:13:38.96:0,39,320	0/0:3,0:3:8.99:0,9,74	0/0:13,0:13:29.96:0,30,246	1/1:3,10:13:30.05:304,30,0	0/0:16,0:16:38.93:0,39,320	0/0:17,1:18:15.97:0,16,338
chr10	98034358	.	G	GT	6344.31	PASS	AC=52;AF=0.963;AN=54;DP=201;FS=0.000;HRun=2;HaplotypeScore=19.8289;InbreedingCoeff=0.2163;MQ=53.49;MQ0=1;QD=33.39;VQSLOD=3.8297;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:15:30.10:432,30,0	1/1:1,4:4:9.03:129,9,0	./.	0/0:3,1:1:0:0,0,0	1/1:0,8:8:15.05:215,15,0	1/1:0,4:4:12.04:173,12,0	1/1:0,4:4:12.04:172,12,0	1/1:1,5:4:9.03:129,9,0	1/1:2,10:12:27.09:388,27,0	1/1:2,4:4:12.04:173,12,0	1/1:0,9:9:18.06:259,18,0	1/1:1,10:11:27.09:388,27,0	1/1:0,10:10:21.07:302,21,0	1/1:1,7:8:18.06:259,18,0	1/1:0,6:6:15.05:216,15,0	1/1:1,11:11:33.11:475,33,0	1/1:1,6:7:18.06:259,18,0	1/1:0,1:1:3.01:43,3,0	1/1:1,4:4:12.04:173,12,0	1/1:0,12:12:36.09:495,36,0	1/1:0,7:7:12.04:173,12,0	1/1:0,3:3:9.03:129,9,0	1/1:1,7:8:18.06:259,18,0	1/1:0,3:3:6.02:86,6,0	1/1:0,3:3:6.02:86,6,0	1/1:0,3:3:9.03:129,9,0	1/1:0,15:15:42.14:604,42,0	1/1:1,4:6:15.04:198,15,0
chr10	98034820	.	G	GTA	420.54	PASS	AB=0.636;AC=3;AF=0.054;AN=56;BaseQRankSum=-4.302;DP=638;FS=2.522;HRun=0;HaplotypeScore=76.4918;InbreedingCoeff=0.6362;MQ=56.63;MQ0=2;MQRankSum=-4.369;QD=16.17;ReadPosRankSum=-0.772;VQSLOD=3.1498;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:44.51:0,45,797	0/0:9,0:9:27.09:0,27,351	0/0:25,0:18:38.91:0,39,466	0/0:22,0:17:20.63:0,21,228	0/0:28,0:28:63.20:0,63,816	0/0:26,0:26:63.17:0,63,788	0/0:26,0:26:60.14:0,60,733	0/1:9,12:15:17.90:267,0,18	0/0:25,0:25:66.21:0,66,858	0/0:27,0:26:63.18:0,63,803	0/0:22,0:22:45.15:0,45,585	0/0:17,0:17:45.15:0,45,585	0/0:22,0:22:57.19:0,57,741	0/0:18,0:18:48.14:0,48,608	0/0:31,0:31:81.19:0,81,1006	0/0:29,0:29:75.24:0,75,975	0/0:24,0:24:48.09:0,48,602	0/0:18,0:18:20.18:0,20,399	0/0:22,0:20:51.15:0,51,648	0/0:19,0:19:42.07:0,42,508	0/0:38,0:38:99:0,107,1323	0/0:25,0:25:63.20:0,63,819	0/0:19,0:19:41.98:0,42,529	0/0:21,0:21:60.19:0,60,780	0/0:16,0:16:45.15:0,45,585	0/0:26,0:26:57.18:0,57,741	0/0:27,0:26:75.24:0,75,971	1/1:0,5:5:15.05:255,15,0
chr10	98035908	.	C	CAAAGG	7336.88	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=-10.926;DP=824;FS=10.343;HRun=0;HaplotypeScore=112.5692;InbreedingCoeff=0.9135;MQ=47.63;MQ0=102;MQRankSum=-5.195;QD=62.18;ReadPosRankSum=1.115;VQSLOD=5.7126;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,30:33:69.24:2103,69,0	0/0:8,0:8:15.04:0,15,271	0/0:45,0:2:6.02:0,6,123	0/0:49,0:1:3.01:0,3,62	0/0:39,0:39:87.30:0,87,1771	0/0:27,0:27:63.22:0,63,1292	0/0:14,0:12:12.04:0,12,246	./.	0/0:30,0:30:69.24:0,69,1414	0/0:34,0:33:84.29:0,84,1718	0/0:22,0:22:39.13:0,39,800	0/0:16,0:16:30.10:0,30,614	0/0:36,0:36:78:0,78,1546	0/0:34,0:34:68.64:0,69,1376	0/0:34,0:34:81.28:0,81,1650	1/1:4,16:19:39.13:1189,39,0	0/0:31,0:30:75.23:0,75,1463	1/1:6,18:24:54.19:1648,54,0	0/0:21,0:9:27.09:0,27,553	0/0:43,0:43:99:0,117,2388	0/0:37,0:36:87.26:0,87,1713	0/0:27,0:27:66.21:0,66,1318	0/0:28,0:28:57.01:0,57,1132	0/0:32,0:31:57.20:0,57,1153	0/0:21,0:21:63.19:0,63,1229	1/1:7,27:33:84.29:2397,84,0	0/0:30,0:29:75.26:0,75,1532	0/0:11,0:10:30.10:0,30,616
chr10	98037673	.	T	TGTAA	2133.77	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-2.483;DP=420;FS=2.520;HRun=0;HaplotypeScore=65.9311;InbreedingCoeff=0.8396;MQ=74.31;MQ0=1;MQRankSum=1.281;QD=24.25;ReadPosRankSum=-3.043;VQSLOD=2.9435;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,12:20:21.07:499,21,0	0/0:7,0:7:15.03:0,15,200	0/0:19,0:15:5.19:0,5,89	0/0:10,0:9:3.01:0,3,35	0/0:25,0:25:57.09:0,57,727	0/0:20,0:20:51.14:0,51,795	0/0:9,0:9:15.03:0,15,201	1/1:37,0:37:83.87:759,84,0	0/0:8,0:8:15.02:0,15,195	0/0:18,0:18:36.10:0,36,531	0/0:26,0:26:51.06:0,51,648	0/0:6,0:6:15.02:0,15,180	0/0:16,0:16:39.09:0,39,548	0/0:5,0:5:12:0,12,127	0/0:10,0:10:21.05:0,21,288	1/1:13,0:13:36.04:587,36,0	0/0:22,0:22:48.05:0,48,666	0/0:17,0:17:33.05:0,33,354	0/0:20,0:20:39.08:0,39,510	0/0:20,0:20:45.09:0,45,623	0/0:7,0:7:12.02:0,12,147	0/0:11,0:11:18.02:0,18,224	0/0:12,0:12:18.02:0,18,224	0/0:4,0:4:6.01:0,6,70	0/0:19,0:19:48.04:0,48,535	1/1:3,10:13:30.01:418,30,0	0/0:21,0:21:51.08:0,51,668	1/1:5,0:5:3.01:36,3,0
chr10	98037690	.	GTAAA	G	330.62	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=1.621;DP=401;FS=1.097;HRun=0;HaplotypeScore=70.6132;InbreedingCoeff=0.3077;MQ=64.15;MQ0=3;MQRankSum=-0.328;QD=6.89;ReadPosRankSum=0.836;VQSLOD=1.8130;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:29.97:0,30,485	0/0:5,0:5:9.03:0,9,220	0/0:17,0:11:6:0,6,96	0/0:8,0:6:9.01:0,9,87	0/0:23,0:23:45.10:0,45,925	0/0:22,0:22:60.16:0,60,1276	0/0:6,0:6:9.03:0,9,220	0/0:47,0:47:84.13:0,84,1098	0/0:5,0:5:9.03:0,9,218	0/0:20,0:20:31.14:0,31,870	0/0:21,0:21:46:0,46,870	0/0:6,0:6:12.02:0,12,200	0/0:16,0:16:33.11:0,33,718	0/0:5,0:5:11.98:0,12,148	0/0:9,0:9:24.08:0,24,540	0/1:15,0:15:38.90:39,0,213	0/0:22,0:22:39.11:0,39,857	1/1:5,14:19:24.08:394,24,0	0/0:18,0:18:41.96:0,42,736	0/0:16,0:16:36.11:0,36,811	0/0:5,0:5:6.02:0,6,147	0/0:8,0:8:15.04:0,15,320	0/0:8,0:8:12.03:0,12,247	0/0:4,0:4:9.02:0,9,146	0/0:22,0:22:42.07:0,42,615	0/1:14,0:14:6.91:7,0,283	0/0:18,0:18:33.08:0,33,709	0/0:0,0:5:3.01:0,3,41
chr10	98037693	.	A	AGT	158.07	PASS	AB=0.921;AC=5;AF=0.089;AN=56;BaseQRankSum=5.854;DP=389;FS=0.000;HRun=0;HaplotypeScore=54.7347;InbreedingCoeff=0.1785;MQ=63.58;MQ0=3;MQRankSum=0.494;QD=3.36;ReadPosRankSum=4.779;VQSLOD=1.4280;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:61.59:62,0,205	0/0:5,0:5:15.04:0,15,223	0/0:15,0:9:17.95:0,18,253	0/0:6,0:5:12.04:0,12,180	0/0:22,0:22:66.20:0,66,1030	0/0:22,0:22:66.21:0,66,1049	0/0:5,0:5:15.04:0,15,223	0/0:45,0:45:99:0,124,1354	0/0:6,0:6:15.03:0,15,220	0/0:20,0:20:57.17:0,57,861	0/0:21,0:21:60.20:0,60,975	0/0:7,0:7:21.07:0,21,339	0/0:15,0:15:45.15:0,45,733	0/0:5,0:5:15.03:0,15,219	0/0:8,0:8:24.08:0,24,391	0/1:11,5:16:74.11:178,0,74	0/0:19,0:19:54.18:0,54,873	0/0:19,0:19:32.89:0,33,320	0/0:20,0:20:57.18:0,57,903	0/0:16,0:16:48.14:0,48,756	0/0:4,0:4:12.04:0,12,196	0/0:8,0:8:24.07:0,24,365	0/0:7,0:7:21.04:0,21,294	0/0:5,0:5:12.04:0,12,195	0/0:22,0:22:66.20:0,66,1027	0/1:12,0:12:14.43:14,0,204	0/0:19,0:18:57.16:0,57,878	1/1:1,0:1:2.60:10,3,0
chr10	98037694	.	A	AAG	126	PASS	AB=0.762;AC=1;AF=0.018;AN=56;BaseQRankSum=2.901;DP=384;FS=1.385;HRun=0;HaplotypeScore=52.0142;InbreedingCoeff=0.0279;MQ=59.77;MQ0=3;MQRankSum=1.007;QD=7.88;ReadPosRankSum=1.145;VQSLOD=2.9283;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:34.43:0,34,301	0/0:5,0:5:15.05:0,15,239	0/0:11,0:5:15.05:0,15,227	0/0:8,0:6:12.02:0,12,171	0/0:21,0:21:63.20:0,63,1003	0/0:22,0:22:66.23:0,66,1069	0/0:5,0:5:15.04:0,15,221	0/0:45,0:45:99:0,134,1371	0/0:6,0:6:18.03:0,18,245	0/0:20,0:20:60.18:0,60,893	0/0:21,0:21:63.20:0,63,1002	0/0:7,0:7:21.06:0,21,320	0/0:15,0:15:45.15:0,45,734	0/0:6,0:6:15.05:0,15,238	0/0:8,0:8:24.08:0,24,391	0/1:11,5:16:71.03:200,0,71	0/0:19,0:19:54.18:0,54,879	0/0:18,0:18:32.68:0,33,295	0/0:20,0:20:60.19:0,60,932	0/0:16,0:16:48.15:0,48,758	0/0:4,0:4:12.04:0,12,196	0/0:8,0:8:24.08:0,24,386	0/0:7,0:7:21.06:0,21,313	0/0:5,0:5:15.01:0,15,216	0/0:21,0:21:63.22:0,63,1022	0/0:12,0:12:27.77:0,28,299	0/0:19,0:18:57.15:0,57,877	0/0:1,0:1:2.68:0,3,11
chr10	98038165	.	TC	T	588.42	PASS	AB=0.984;AC=11;AF=0.196;AN=56;BaseQRankSum=3.284;DP=316;FS=24.546;HRun=11;HaplotypeScore=51.7381;InbreedingCoeff=0.3834;MQ=69.41;MQ0=2;MQRankSum=2.036;QD=5.07;ReadPosRankSum=5.121;VQSLOD=0.0863;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:63.51:0,64,387	0/0:1,0:1:0:0,0,0	0/0:21,0:16:2.64:0,3,190	0/0:16,0:9:17.40:0,17,138	0/0:5,0:5:2.18:0,2,17	1/1:7,0:7:0.81:2,1,0	0/0:13,0:13:4.61:0,5,25	0/1:19,1:20:5.75:6,0,57	0/0:6,0:6:11.97:0,12,96	0/0:8,0:8:6.94:0,7,53	0/0:5,0:5:6:0,6,54	0/0:7,0:7:0.89:0,1,2	0/1:9,0:9:9.83:10,0,23	0/0:6,0:6:3:0,3,26	0/0:7,0:7:6.46:0,6,50	1/1:4,0:30:42.77:123,43,0	0/0:7,0:7:3.87:0,4,26	1/1:3,17:18:24.08:280,24,0	0/0:6,0:6:3:0,3,29	0/0:6,0:7:5.99:0,6,49	0/0:13,0:13:9:0,9,78	0/0:7,0:7:0:0,0,0	0/0:6,0:6:9.01:0,9,82	0/0:7,0:7:12.44:0,12,97	0/0:4,0:4:6.47:0,6,53	1/1:3,13:17:40.63:304,41,0	0/1:13,0:13:0.99:1,0,61	0/0:8,0:8:8.88:0,9,27
chr10	98038175	.	C	CA	1300.16	PASS	AB=0.913;AC=11;AF=0.196;AN=56;BaseQRankSum=-1.280;DP=315;FS=58.023;HRun=0;HaplotypeScore=62.5197;InbreedingCoeff=0.6028;MQ=66.75;MQ0=2;MQRankSum=-0.806;QD=9.09;ReadPosRankSum=4.794;VQSLOD=1.2096;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:43,0:43:7.04:120,7,0	0/0:1,0:1:0:0,0,0	0/0:21,0:15:35.32:0,35,304	0/0:21,0:15:26.26:0,26,242	0/0:6,0:6:4.97:0,5,35	0/0:8,0:8:4.47:0,4,42	0/0:13,0:13:5.71:0,6,38	0/1:19,2:21:16.88:205,0,17	0/0:4,0:4:11.97:0,12,96	0/0:8,0:8:15.84:0,16,114	0/0:3,0:3:6.01:0,6,66	0/0:5,0:5:3.86:0,4,23	0/0:11,0:11:18.76:0,19,128	0/0:3,0:3:5.98:0,6,47	0/0:9,0:9:12.88:0,13,92	1/1:30,0:30:66.58:380,67,0	0/0:4,0:4:6.86:0,7,47	1/1:21,0:19:28.41:216,28,0	0/0:5,0:5:6.45:0,6,51	0/0:6,0:6:5.99:0,6,49	0/0:14,0:14:20.93:0,21,167	0/0:4,0:4:2.98:0,3,21	0/0:6,0:6:17.91:0,18,143	0/0:6,0:6:14.96:0,15,120	0/0:3,0:3:6.47:0,6,53	1/1:20,0:20:55.97:379,56,0	0/0:11,0:11:12.69:0,13,94	1/1:1,7:8:12.04:163,12,0
chr10	98040472	.	A	ACT	1605.85	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.148;DP=576;FS=0.000;HRun=0;HaplotypeScore=89.7954;InbreedingCoeff=0.9097;MQ=61.62;MQ0=12;MQRankSum=-2.637;QD=14.73;ReadPosRankSum=-2.908;VQSLOD=2.8410;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:15.56:344,16,0	0/0:7,0:7:21.04:0,21,263	0/0:42,0:14:36.94:0,37,397	0/0:41,0:22:40.72:0,41,424	0/0:17,0:17:48.10:0,48,610	0/0:20,0:20:57.04:0,57,629	0/0:19,0:19:56.83:0,57,618	1/1:34,0:34:94.41:643,94,0	0/0:21,0:21:63.13:0,63,790	0/0:26,0:25:75.18:0,75,932	0/0:20,0:20:60.03:0,60,737	0/0:13,0:13:29.96:0,30,347	0/0:20,0:20:51.11:0,51,651	0/0:17,0:17:51.09:0,51,615	0/0:12,0:12:36.06:0,36,428	1/1:16,0:15:6.27:54,6,0	0/0:23,0:22:44.42:0,44,780	1/1:7,0:7:3.01:37,3,0	0/0:11,0:11:30.07:0,30,380	0/0:20,0:20:57.04:0,57,696	0/0:28,0:26:66.13:0,66,815	0/0:16,0:16:45.10:0,45,587	0/0:22,0:22:43.30:0,43,739	0/0:24,0:24:69.04:0,69,794	0/0:17,0:17:29.36:0,29,549	1/1:10,11:21:14.72:667,15,0	0/0:30,0:30:83.83:0,84,978	1/1:2,0:2:5.63:30,6,0
chr10	98040474	.	TCA	T	663	PASS	AB=0.937;AC=12;AF=0.214;AN=56;BaseQRankSum=7.089;DP=596;FS=14.452;HRun=0;HaplotypeScore=89.0623;InbreedingCoeff=0.0562;MQ=60.97;MQ0=13;MQRankSum=-0.182;QD=2.93;ReadPosRankSum=-2.854;VQSLOD=0.1693;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:7.77:0,8,56	0/0:8,0:8:15.05:0,15,229	0/0:43,0:14:17.50:0,17,191	0/0:42,0:22:22.12:0,22,205	0/0:16,1:17:7.15:0,7,559	0/0:19,0:20:24.73:0,25,490	0/0:20,0:20:33.03:0,33,466	1/1:15,18:34:56.97:624,57,0	0/1:19,2:21:15.79:16,0,698	0/1:27,0:26:5.65:6,0,766	0/1:18,2:20:2.77:3,0,617	0/0:14,0:14:33.08:0,33,460	0/0:19,0:19:7.16:0,7,570	0/1:19,0:19:14.45:14,0,506	0/0:12,0:12:2.16:0,2,345	0/0:1,0:22:3:0,3,26	0/0:21,1:22:22.18:0,22,760	0/0:0,0:10:3:0,3,26	0/0:13,0:12:27.05:0,27,377	0/1:17,3:20:41.66:42,0,562	0/1:27,2:27:8.81:9,0,741	0/0:16,0:16:39.09:0,39,584	0/0:21,0:22:48.14:0,48,709	0/1:24,1:25:22.18:22,0,623	0/0:17,0:18:39.11:0,39,556	0/0:21,0:21:46.01:0,46,388	0/1:26,3:29:38.73:39,0,786	1/1:1,1:2:3.01:35,3,0
chr10	98040482	.	A	ACC	613.38	PASS	AB=0.583;AC=3;AF=0.054;AN=56;BaseQRankSum=4.088;DP=620;FS=7.221;HRun=1;HaplotypeScore=94.1880;InbreedingCoeff=0.3547;MQ=57.99;MQ0=16;MQRankSum=-1.297;QD=21.91;ReadPosRankSum=2.532;VQSLOD=1.6588;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:35.89:0,36,258	0/0:8,0:8:18.05:0,18,252	0/0:48,0:14:29.82:0,30,316	0/0:42,0:20:35.52:0,36,466	0/0:20,0:20:60.09:0,60,762	0/0:25,0:25:69.01:0,69,780	0/0:19,0:19:56.97:0,57,648	0/0:30,0:30:89.65:0,90,707	0/0:22,0:22:63.10:0,63,846	0/0:29,0:28:84.18:0,84,1079	0/0:22,0:22:63:0,63,793	0/0:17,0:17:48:0,48,571	0/0:19,0:19:54.09:0,54,712	0/0:23,0:23:63.05:0,63,737	0/0:14,0:14:42.07:0,42,518	0/0:23,0:22:9.36:0,9,103	0/0:27,0:26:53.39:0,53,897	1/1:7,0:7:2.04:6,2,0	0/0:12,0:11:33.06:0,33,423	0/0:20,0:20:57.03:0,57,730	0/0:30,0:28:72.13:0,72,942	0/0:16,0:16:48.11:0,48,649	0/0:21,0:21:36.44:0,36,740	0/0:28,0:28:75.06:0,75,898	0/0:17,0:17:30.38:0,30,595	0/1:6,15:21:15.92:687,0,16	0/0:27,0:27:75.09:0,75,979	0/0:2,0:2:2.98:0,3,22
chr10	98040731	.	G	GAAA	1969.93	PASS	AB=0.765;AC=10;AF=0.179;AN=56;BaseQRankSum=1.209;DP=506;FS=12.720;HRun=12;HaplotypeScore=84.4340;InbreedingCoeff=0.7602;MQ=78.19;MQ0=1;MQRankSum=-1.063;QD=15.27;ReadPosRankSum=-1.630;VQSLOD=0.4449;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,3:32:13.40:389,13,0	0/0:6,0:7:10.45:0,10,132	0/1:29,0:24:5.05:5,0,192	0/0:21,0:17:11.42:0,11,144	0/0:17,0:18:38.70:0,39,415	0/0:18,0:19:44.99:0,45,489	0/0:10,0:15:38.67:0,39,357	1/1:11,8:20:39.37:582,39,0	0/0:17,0:17:45.05:0,45,504	0/0:25,0:28:49.34:0,49,553	0/0:20,0:20:44.98:0,45,505	0/0:12,0:13:31.54:0,32,356	0/0:13,0:15:31.54:0,32,366	0/0:15,0:18:37.35:0,37,391	0/0:23,0:23:53.99:0,54,605	0/0:15,0:16:28.50:0,29,325	0/0:12,0:14:16.16:0,16,365	0/1:4,0:18:14.44:17,0,14	0/0:15,0:17:17.63:0,18,381	0/0:15,0:17:38.88:0,39,405	0/0:13,0:15:38.93:0,39,392	0/0:18,0:19:26.84:0,27,287	0/0:12,0:13:29.93:0,30,320	0/0:15,0:19:31.34:0,31,335	0/0:12,0:13:31.30:0,31,351	1/1:4,14:19:48.12:788,48,0	0/0:17,0:17:34.50:0,34,401	1/1:0,7:8:21.05:353,21,0
chr10	98041928	.	AAAAC	A	533.68	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.178;DP=650;FS=0.988;HRun=0;HaplotypeScore=103.4898;InbreedingCoeff=0.9558;MQ=68.28;MQ0=1;MQRankSum=-0.674;QD=23.20;ReadPosRankSum=1.220;VQSLOD=3.1556;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,102,2343	0/0:12,0:12:24.08:0,24,570	0/0:22,0:20:38.79:0,39,773	0/0:14,0:13:15.93:0,16,314	0/0:33,0:33:87.30:0,87,2086	0/0:20,0:20:54.17:0,54,1282	0/0:22,0:22:54.18:0,54,1311	0/0:24,0:24:42.12:0,42,941	0/0:11,0:11:30.09:0,30,695	0/0:35,0:35:87.29:0,87,2046	0/0:21,0:21:54.18:0,54,1337	0/0:13,0:13:30.10:0,30,716	0/0:24,0:24:60.21:0,60,1458	0/0:31,0:31:72.23:0,72,1704	0/0:23,0:23:66.23:0,66,1599	0/0:16,0:16:45.15:0,45,1067	0/0:29,0:29:75.19:0,75,1733	1/1:8,15:23:39.09:628,39,0	0/0:25,0:25:66.22:0,66,1433	0/0:23,0:23:12.49:0,12,1408	0/0:17,0:16:24.08:0,24,562	0/0:30,0:30:72.18:0,72,1555	0/0:33,0:33:84.29:0,84,1966	0/0:15,0:15:36.12:0,36,893	0/0:23,0:23:66.23:0,66,1590	0/0:30,0:30:78.25:0,78,1781	0/0:25,0:25:63.22:0,63,1531	0/0:12,0:12:36.12:0,36,892
chr10	98042785	.	CAT	C	246.75	PASS	AB=1.000;AC=16;AF=0.500;AN=32;BaseQRankSum=3.510;DP=148;FS=11.143;HRun=0;HaplotypeScore=21.9904;InbreedingCoeff=0.3529;MQ=74.96;MQ0=0;MQRankSum=0.720;QD=4.18;ReadPosRankSum=2.315;VQSLOD=-0.0362;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,5:14:15.04:167,15,0	./.	./.	./.	./.	./.	./.	0/1:15,0:15:4.68:5,0,13	./.	./.	0/0:4,0:4:3.01:0,3,47	1/1:2,1:3:3.01:35,3,0	./.	1/1:2,0:3:2.84:14,3,0	1/1:3,2:5:6.02:69,6,0	1/1:1,0:3:5.68:28,6,0	0/0:15,0:15:1.67:0,2,427	0/0:3,0:3:2.22:0,2,7	0/0:5,0:5:3.01:0,3,47	./.	0/0:4,0:4:4.83:0,5,48	0/0:4,0:4:0.47:0,0,1	./.	./.	0/0:4,0:4:9.03:0,9,136	0/1:7,0:7:2:2,0,13	1/1:4,1:5:3.01:35,3,0	1/1:4,0:4:1.25:3,1,0
chr10	98042820	.	AAT	A	100.09	PASS	AB=0.893;AC=5;AF=0.109;AN=46;BaseQRankSum=2.463;DP=146;FS=1.322;HRun=0;HaplotypeScore=25.0963;InbreedingCoeff=-0.0041;MQ=58.96;MQ0=8;MQRankSum=-3.382;QD=1.96;ReadPosRankSum=-0.252;VQSLOD=0.9730;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:12.04:0,12,204	0/0:1,0:1:3.01:0,3,61	1/1:21,0:2:1.25:3,1,0	0/0:41,0:8:8.50:0,9,69	0/0:2,0:2:3.01:0,3,61	0/0:3,0:3:9.03:0,9,162	./.	0/1:18,4:22:99:147,0,435	0/0:2,0:2:6.02:0,6,120	0/0:1,0:1:3.01:0,3,55	0/0:2,0:2:6.02:0,6,122	0/0:1,0:1:3:0,3,28	./.	0/0:1,0:1:3.01:0,3,61	0/0:3,0:3:9.03:0,9,181	0/0:3,0:3:9.03:0,9,150	0/0:11,0:11:33.11:0,33,637	0/1:3,0:3:5.94:12,0,6	0/0:4,0:4:12.02:0,12,196	./.	0/0:2,0:2:6.02:0,6,100	0/0:1,0:1:3.01:0,3,51	./.	./.	0/0:7,0:7:21.07:0,21,395	0/0:3,0:3:5.98:0,6,48	0/0:1,0:1:3.01:0,3,60	0/1:4,1:5:11.27:33,0,11
chr10	98042822	.	T	TTA	896.70	PASS	AC=8;AF=0.174;AN=46;BaseQRankSum=-0.407;DP=150;FS=2.090;HRun=0;HaplotypeScore=21.8196;InbreedingCoeff=0.4357;MQ=59.49;MQ0=8;MQRankSum=-3.426;QD=16.92;ReadPosRankSum=-1.425;VQSLOD=2.8917;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:9.03:0,9,112	0/0:2,0:2:3.01:0,3,39	1/1:21,0:2:2.68:11,3,0	0/0:36,1:8:5.96:0,6,59	0/0:2,0:2:3.01:0,3,39	0/0:3,0:3:9.03:0,9,117	./.	1/1:8,16:24:44.68:806,45,0	0/0:2,0:2:6.02:0,6,78	0/0:1,0:1:3.01:0,3,39	0/0:2,0:2:6.02:0,6,78	0/0:2,0:2:2.37:0,2,8	./.	0/0:1,0:1:3.01:0,3,39	0/0:3,0:3:9.03:0,9,117	0/0:3,0:3:6.02:0,6,77	0/0:11,0:11:30.10:0,30,389	1/1:1,2:3:6.02:102,6,0	0/0:5,0:5:15.04:0,15,182	./.	0/0:2,0:2:6.02:0,6,77	0/0:1,0:1:3.01:0,3,39	./.	0/0:1,0:1:2.97:0,3,20	0/0:7,0:7:21.07:0,21,271	./.	0/0:2,0:2:6.01:0,6,66	1/1:1,4:5:3.18:98,3,0
chr10	98043699	.	ACACCACCACCAC	A	619.24	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=3.410;DP=417;FS=1.666;HRun=0;HaplotypeScore=126.5953;InbreedingCoeff=0.5613;MQ=67.65;MQ0=11;MQRankSum=-4.408;QD=17.69;ReadPosRankSum=1.232;VQSLOD=2.2180;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,19:35:23.11:712,23,0	0/0:4,0:4:5.98:0,6,197	./.	0/0:37,0:16:6.91:0,7,102	0/0:10,0:10:21.07:0,21,972	0/0:12,0:12:18.05:0,18,727	0/0:20,0:20:33.07:0,33,1268	0/0:19,0:19:15.04:0,15,310	0/0:10,0:10:21.07:0,21,944	0/0:6,0:6:12.04:0,12,468	0/0:7,0:7:6.01:0,6,203	0/0:9,0:9:15.04:0,15,689	0/0:13,0:13:27.09:0,27,1423	0/0:20,0:20:33.11:0,33,1816	0/0:8,0:8:18.05:0,18,827	0/0:9,0:9:18.05:0,18,512	0/0:21,0:22:39.13:0,39,2090	0/0:4,0:7:6.02:0,6,291	0/0:15,0:15:18.06:0,18,923	0/0:14,0:14:21.05:0,21,971	0/0:26,0:27:51.14:0,51,2170	0/0:10,0:10:12.04:0,12,533	0/0:10,0:10:15.05:0,15,851	0/0:20,0:20:33.11:0,33,1714	0/0:5,0:5:6.02:0,6,307	0/0:8,0:11:24.08:0,24,973	0/0:16,0:16:27.09:0,27,1445	0/0:7,0:7:9.03:0,9,401
chr10	98044973	.	CA	C	1036.35	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=5.481;DP=354;FS=7.193;HRun=9;HaplotypeScore=37.0523;InbreedingCoeff=0.9095;MQ=66.46;MQ0=0;MQRankSum=-1.980;QD=17.27;ReadPosRankSum=1.109;VQSLOD=3.0583;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:14:38.78:0,39,407	0/0:7,0:7:18.05:0,18,208	0/0:10,0:7:11.62:0,12,102	0/1:5,0:4:0:0,0,0	0/0:17,1:18:11.65:0,12,386	0/0:11,0:11:30.07:0,30,336	0/0:6,0:6:15.03:0,15,164	1/1:4,17:21:51.01:462,51,0	0/0:16,0:16:39.10:0,39,437	0/0:15,0:15:42.12:0,42,484	0/0:27,0:27:69.20:0,69,795	0/0:9,0:9:24.06:0,24,266	0/0:12,0:12:30.08:0,30,338	0/0:10,0:10:30.09:0,30,343	0/0:6,0:6:18.05:0,18,208	1/1:0,7:7:18.01:165,18,0	0/0:20,0:20:51.15:0,51,588	1/1:3,11:14:33.01:302,33,0	0/0:20,0:20:48.13:0,48,545	0/0:17,0:18:47.96:0,48,520	0/0:6,0:6:15.04:0,15,173	0/0:6,0:6:18.04:0,18,198	0/0:19,0:19:45.13:0,45,519	0/0:9,0:9:24.07:0,24,274	0/0:18,0:18:45.13:0,45,518	1/1:2,8:10:24:220,24,0	0/0:17,0:17:42.11:0,42,474	1/1:0,2:2:6:55,6,0
chr10	98046268	.	TA	T	2457.44	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.244;DP=573;FS=0.000;HRun=1;HaplotypeScore=55.7243;InbreedingCoeff=0.9972;MQ=82.87;MQ0=0;MQRankSum=-4.243;QD=36.68;ReadPosRankSum=-2.121;VQSLOD=2.9720;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:93.22:1257,93,0	0/0:8,0:8:24.08:0,24,380	0/0:28,0:28:77.94:0,78,1195	0/0:14,0:14:38.91:0,39,561	0/0:32,0:32:96.31:0,96,1501	0/0:28,0:28:84.26:0,84,1296	0/0:23,0:23:66.21:0,66,1028	1/1:0,25:25:75.25:1049,75,0	0/0:17,0:17:51.17:0,51,815	0/0:24,0:24:69.24:0,69,1104	0/0:24,0:24:69.21:0,69,1057	0/0:12,0:12:36.12:0,36,576	0/0:18,0:18:54.18:0,54,857	0/0:18,0:18:54.16:0,54,813	0/0:21,0:21:63.21:0,63,1007	0/0:14,0:14:39.13:0,39,623	0/0:13,0:13:39.11:0,39,595	0/0:10,0:10:27.06:0,27,402	0/0:29,0:29:87.24:0,87,1337	0/0:36,0:36:99:0,105,1639	0/0:16,0:16:48.14:0,48,742	0/0:18,0:18:51.17:0,51,815	0/0:13,0:13:39.13:0,39,624	0/0:12,0:12:33.11:0,33,528	0/0:30,0:30:90.31:0,90,1439	0/0:22,0:22:63.21:0,63,1006	0/0:26,0:26:78.27:0,78,1247	1/1:0,9:9:21.07:294,21,0
chr10	98046792	.	TTG	T	849.49	PASS	AB=0.880;AC=20;AF=0.370;AN=54;BaseQRankSum=1.605;DP=699;FS=1.248;HRun=0;HaplotypeScore=112.7715;InbreedingCoeff=0.0377;MQ=63.55;MQ0=17;MQRankSum=-0.354;QD=2.30;ReadPosRankSum=1.015;VQSLOD=2.2224;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:40:62.69:0,63,611	0/1:5,3:8:14.95:27,0,15	0/0:25,0:16:3:0,3,27	0/0:37,0:29:4.15:0,4,19	0/1:25,1:26:76.63:77,0,149	0/1:29,1:29:19.53:20,0,295	0/1:28,2:30:6.23:6,0,260	./.	0/0:34,0:34:30.21:0,30,323	0/0:36,0:35:23.89:0,24,594	0/1:19,1:19:38.48:38,0,158	0/1:22,0:22:14.04:14,0,150	0/1:10,0:9:23.78:24,0,57	0/0:25,0:24:27.31:0,27,336	0/0:20,0:20:23.93:0,24,293	0/1:11,0:24:14.64:48,0,15	0/1:13,14:27:12.04:276,0,12	1/1:2,0:2:2.80:13,3,0	0/1:23,0:21:0.06:78,0,0	1/1:13,15:26:17.88:158,18,0	0/1:39,20:58:1.05:57,0,1	0/0:25,0:25:25.73:0,26,271	0/0:16,0:16:4.44:0,4,124	0/1:26,1:25:37.06:37,0,261	0/0:17,0:17:5.25:0,5,227	0/0:30,0:28:17.34:0,17,187	1/1:11,12:23:8.85:99,9,0	1/1:3,0:8:8.52:42,9,0
chr10	98046826	.	GTGTGTGTA	G	96.26	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=2.149;DP=667;FS=30.567;HRun=0;HaplotypeScore=169.0869;InbreedingCoeff=0.2265;MQ=54.75;MQ0=16;MQRankSum=-4.115;QD=1.58;ReadPosRankSum=-1.560;VQSLOD=1.0303;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:44.66:0,45,2403	0/0:9,0:9:17.98:0,18,195	0/0:22,0:13:35.99:0,36,333	0/0:33,0:21:8.35:0,8,445	0/0:19,0:19:18.11:0,18,797	0/0:27,0:26:57.07:0,57,1440	0/0:31,0:31:49.02:0,49,1129	0/0:17,0:15:35.46:0,35,306	0/0:28,0:28:30.18:0,30,1322	0/0:32,0:31:48.33:0,48,1950	0/0:20,0:19:20.12:0,20,841	0/0:22,0:22:47.98:0,48,884	0/0:9,0:8:14.99:0,15,565	0/0:22,0:21:42.96:0,43,1268	0/0:32,0:32:62.62:0,63,1741	0/1:26,0:26:4.19:4,0,222	0/0:28,0:27:59.96:0,60,996	1/1:0,7:7:3.01:81,3,0	0/1:18,0:15:14.08:14,0,486	0/0:22,0:22:29.71:0,30,524	0/0:58,0:55:13.64:0,14,744	0/0:31,0:31:56.81:0,57,1411	0/0:16,0:16:30:0,30,774	0/0:19,0:17:42.03:0,42,1036	0/0:14,0:14:30.06:0,30,702	0/0:28,0:27:29.91:0,30,1074	0/0:23,0:23:30.26:0,30,451	0/1:10,0:9:32.95:101,0,33
chr10	98046949	.	GGT	G	236.39	PASS	AB=0.963;AC=16;AF=0.320;AN=50;BaseQRankSum=3.878;DP=576;FS=10.523;HRun=0;HaplotypeScore=78.3191;InbreedingCoeff=-0.3769;MQ=50.61;MQ0=18;MQRankSum=0.619;QD=0.74;ReadPosRankSum=2.003;VQSLOD=0.4693;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:34:36.75:37,0,40	0/1:6,0:6:31.68:32,0,117	./.	./.	0/1:21,0:20:18.79:19,0,104	1/1:16,0:15:1.77:4,2,0	0/1:22,2:24:23.62:24,0,52	0/0:26,0:24:9.92:0,10,52	0/1:22,2:23:17.11:17,0,164	0/0:22,0:22:15.92:0,16,196	0/0:8,0:8:3.01:0,3,42	0/1:15,3:18:44.60:45,0,163	0/1:10,0:10:8.80:9,0,142	0/1:18,0:19:16.67:17,0,39	0/1:20,1:21:13.51:14,0,172	0/1:14,0:15:7.63:8,0,17	0/0:33,0:33:32.03:0,32,603	0/1:16,0:16:9.99:37,0,10	./.	0/0:17,0:16:11.64:0,12,168	0/1:50,0:47:30.42:30,0,153	0/0:19,0:18:6.02:0,6,87	0/0:17,0:17:9:0,9,91	0/0:24,0:24:33.11:0,33,478	0/0:8,0:10:9.01:0,9,96	0/1:24,1:23:65.98:66,0,108	0/1:14,3:15:20.62:21,0,81	0/0:4,0:4:2.67:0,3,38
chr10	98046992	.	GTC	G	568.33	PASS	AB=0.947;AC=9;AF=0.161;AN=56;BaseQRankSum=4.803;DP=617;FS=40.509;HRun=0;HaplotypeScore=95.6439;InbreedingCoeff=0.2867;MQ=50.49;MQ0=28;MQRankSum=-0.349;QD=4.15;ReadPosRankSum=-3.026;VQSLOD=-0.0416;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:40,1:38:9.73:92,0,10	0/1:11,0:11:4.78:5,0,207	0/0:7,0:6:14.02:0,14,109	0/0:16,0:8:16.78:0,17,98	0/0:23,0:22:44.80:0,45,485	0/1:22,0:21:3.68:4,0,167	0/0:20,1:21:29.81:0,30,330	1/1:26,0:23:49.68:381,50,0	0/0:22,0:21:9.76:0,10,338	0/0:23,0:22:62.69:0,63,631	0/0:15,0:14:14.86:0,15,156	0/0:20,1:20:10.37:0,10,274	0/0:13,0:12:16.19:0,16,278	0/0:16,0:16:11.33:0,11,115	0/0:28,0:28:24.04:0,24,521	0/1:13,1:14:62.78:63,0,99	0/0:31,0:31:30.21:0,30,868	0/1:11,3:13:65.10:65,0,144	0/0:9,0:5:14.87:0,15,116	0/0:23,0:21:25.08:0,25,399	0/0:51,0:47:49.40:0,49,587	0/0:32,0:30:47.83:0,48,444	0/0:19,0:19:16.27:0,16,183	0/0:36,0:35:77.92:0,78,895	0/0:20,0:19:33:0,33,342	0/0:35,0:30:36.99:0,37,609	0/0:18,0:17:21.43:0,21,279	1/1:9,0:9:1.83:94,2,0
chr10	98046994	.	C	CTG	181.36	PASS	AB=0.773;AC=6;AF=0.107;AN=56;BaseQRankSum=4.404;DP=612;FS=0.976;HRun=0;HaplotypeScore=98.9435;InbreedingCoeff=0.6079;MQ=51.14;MQ0=28;MQRankSum=-1.955;QD=2.08;ReadPosRankSum=-1.545;VQSLOD=1.6067;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,32:38:0.46:84,0,0	0/0:13,0:13:28.60:0,29,324	0/0:8,0:6:0.10:0,0,146	0/0:17,0:9:20.24:0,20,209	0/0:23,0:22:51.15:0,51,665	0/0:23,0:22:26.78:0,27,318	0/0:21,0:21:44.67:0,45,564	1/1:24,0:21:13.67:101,14,0	0/0:22,0:21:31.01:0,31,429	0/0:23,0:22:57.16:0,57,765	0/0:15,0:14:15.05:0,15,202	0/0:20,0:19:18.90:0,19,308	0/0:12,0:11:28.63:0,29,347	0/0:16,0:16:11.50:0,12,150	0/0:30,0:30:64.73:0,65,803	0/1:14,0:14:84.56:85,0,177	0/0:30,0:30:73.56:0,74,886	0/0:14,0:13:24.63:0,25,295	0/0:10,0:6:17.96:0,18,187	0/0:21,0:19:39.06:0,39,498	0/0:49,0:44:74.81:0,75,933	0/0:33,0:31:48.16:0,48,640	0/0:18,0:18:17.22:0,17,200	0/0:35,0:34:69.23:0,69,930	0/0:19,0:18:31.90:0,32,396	0/0:35,0:31:59.52:0,60,798	0/0:16,0:16:33.02:0,33,409	1/1:8,0:8:7.31:38,7,0
chr10	98047998	.	T	TTTTC	509.89	PASS	AB=0.915;AC=6;AF=0.107;AN=56;BaseQRankSum=-1.611;DP=541;FS=3.008;HRun=0;HaplotypeScore=93.8331;InbreedingCoeff=0.3791;MQ=46.34;MQ0=36;MQRankSum=-2.567;QD=5.05;ReadPosRankSum=-1.528;VQSLOD=2.0298;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:22:30.03:272,30,0	0/0:9,0:9:26.40:0,26,272	0/1:19,0:2:0.05:0,0,0	0/0:22,0:6:11.50:0,11,93	0/0:29,0:29:38.01:0,38,610	0/0:23,0:23:33.21:0,33,565	0/0:11,0:6:11.99:0,12,120	0/1:13,14:21:41.82:269,0,42	0/0:19,0:16:27.54:0,28,372	0/0:21,0:21:54.99:0,55,565	0/0:29,0:29:67.62:0,68,833	0/0:12,0:9:11.96:0,12,100	0/0:22,0:21:35.65:0,36,330	0/0:9,0:9:20.96:0,21,228	0/0:12,0:12:18.02:0,18,192	0/1:14,0:13:8.55:9,0,107	0/0:21,0:20:43.40:0,43,414	0/0:14,0:8:8:0,8,82	0/0:25,0:21:36.48:0,36,499	0/0:42,0:39:26.88:0,27,898	0/0:6,0:3:6:0,6,54	0/0:20,0:17:37.10:0,37,399	0/0:18,0:18:27.68:0,28,272	0/0:9,0:8:11.03:0,11,97	0/0:18,0:17:20.56:0,21,261	0/0:27,0:21:56.25:0,56,576	0/0:21,0:18:48.61:0,49,491	0/1:9,0:8:6.43:80,0,6
chr10	98048213	.	CTAACTTCTTGAGTTCTTTGTATATATTGGAATT	C	757.03	PASS	AB=0.647;AC=1;AF=0.018;AN=56;BaseQRankSum=5.477;DP=572;FS=0.000;HRun=0;HaplotypeScore=424.8309;InbreedingCoeff=-0.0188;MQ=56.89;MQ0=14;MQRankSum=-0.622;QD=34.41;ReadPosRankSum=-1.909;VQSLOD=0.2680;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.29:0,84,10316	0/0:6,0:6:18.06:0,18,1908	0/0:18,0:10:29.93:0,30,1535	0/0:12,0:6:17.59:0,18,645	0/0:25,0:25:75.21:0,75,7650	0/0:23,0:23:66.20:0,66,6918	0/0:13,0:13:39.07:0,39,3645	0/0:28,0:25:72.23:0,72,5123	0/0:30,0:29:81.28:0,81,10006	0/0:25,0:25:72.23:0,72,9032	0/0:31,0:31:90.30:0,90,11063	0/0:19,0:18:51.18:0,51,6151	0/0:16,0:16:48.16:0,48,6861	0/0:17,0:17:48.16:0,48,6781	0/0:23,0:23:69.24:0,69,9245	0/0:20,0:20:51.16:0,51,5574	0/0:17,0:17:51.18:0,51,5916	0/0:15,0:15:42.14:0,42,4594	0/0:26,0:18:51.18:0,51,6159	0/0:35,0:35:99:0,100,12560	0/0:11,0:11:33.11:0,33,3849	0/0:17,0:17:45.15:0,45,5306	0/0:16,0:16:39.13:0,39,5125	0/0:21,0:21:63.22:0,63,7979	0/0:16,0:16:45.15:0,45,5600	0/1:10,12:22:99:832,0,852	0/0:27,0:25:75.26:0,75,9966	0/0:15,0:15:45.15:0,45,5325
chr10	98050150	.	AT	A	531.81	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.413;DP=471;FS=0.753;HRun=8;HaplotypeScore=47.7612;InbreedingCoeff=0.8360;MQ=56.10;MQ0=2;MQRankSum=-4.717;QD=16.12;ReadPosRankSum=-1.396;VQSLOD=3.0413;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:27:40.29:0,40,758	0/0:6,0:6:18.04:0,18,206	0/0:6,0:2:3.01:0,3,37	0/0:9,0:5:6.02:0,6,71	0/0:28,0:27:75.20:0,75,880	0/0:20,0:20:57.17:0,57,688	0/0:7,0:7:18.06:0,18,217	1/1:4,18:15:36.01:334,36,0	0/0:17,0:17:48.15:0,48,579	0/0:28,0:28:81.25:0,81,979	0/0:19,0:19:48.13:0,48,568	0/0:8,0:8:21.06:0,21,254	0/0:25,0:25:66.20:0,66,794	0/0:8,0:8:24.07:0,24,290	0/0:20,0:20:45.13:0,45,534	0/0:11,0:11:33.09:0,33,389	0/0:24,1:25:60.57:0,61,703	0/0:21,1:22:31.43:0,31,646	0/0:20,0:18:42.13:0,42,507	0/0:29,0:29:84.24:0,84,993	0/0:6,0:6:18.06:0,18,217	0/0:9,0:9:27.05:0,27,293	0/0:20,0:20:60.17:0,60,713	0/0:3,0:3:9.03:0,9,109	0/0:17,0:17:48.14:0,48,569	0/0:17,0:17:48.14:0,48,571	0/0:31,0:31:84.25:0,84,1003	1/1:0,11:11:33.05:319,33,0
chr10	98050243	.	CT	C	1951.72	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.365;DP=527;FS=1.115;HRun=2;HaplotypeScore=62.7652;InbreedingCoeff=0.9880;MQ=79.80;MQ0=0;MQRankSum=-4.332;QD=30.98;ReadPosRankSum=1.469;VQSLOD=3.3017;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:84.27:1086,84,0	0/0:4,0:4:12.04:0,12,180	0/0:19,0:18:45.68:0,46,659	0/0:20,0:20:51.07:0,51,641	0/0:28,0:28:81.25:0,81,1173	0/0:23,0:23:69.19:0,69,990	0/0:9,0:9:27.08:0,27,386	1/1:3,16:14:33.11:425,33,0	0/0:13,0:13:39.12:0,39,562	0/0:24,0:24:72.24:0,72,1079	0/0:27,0:27:81.27:0,81,1207	0/0:9,0:9:27.08:0,27,387	0/0:19,0:19:57.19:0,57,851	0/0:13,0:13:39.13:0,39,584	0/0:25,0:25:75.25:0,75,1124	0/0:13,0:13:39.13:0,39,584	0/0:20,0:20:60.20:0,60,897	0/0:11,0:11:33.11:0,33,494	0/0:17,0:17:51.17:0,51,765	0/0:28,0:28:78.24:0,78,1147	0/0:12,0:12:33.11:0,33,492	0/0:15,0:15:45.15:0,45,675	0/0:16,0:16:48.16:0,48,718	0/0:18,0:18:51.16:0,51,745	0/0:14,0:14:42.14:0,42,628	0/0:31,0:31:93.30:0,93,1375	0/0:36,0:36:99:0,105,1555	1/1:1,15:16:45.15:584,45,0
chr10	98050788	.	G	GGT	500.06	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.677;DP=684;FS=0.970;HRun=0;HaplotypeScore=76.7747;InbreedingCoeff=0.8785;MQ=54.16;MQ0=33;MQRankSum=-0.017;QD=29.42;ReadPosRankSum=0.890;VQSLOD=5.2187;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:55.31:0,55,1199	0/0:9,0:9:24.08:0,24,391	0/0:29,0:4:12.04:0,12,196	0/0:28,0:2:6.02:0,6,98	0/0:35,0:35:99:0,102,1655	0/0:19,0:19:54.18:0,54,881	0/0:24,0:23:63.21:0,63,1010	0/0:22,0:18:54.18:0,54,878	0/0:25,0:25:75.24:0,75,1199	0/0:35,0:34:99:0,99,1593	0/0:25,0:25:75.26:0,75,1212	0/0:21,0:21:63.19:0,63,979	0/0:24,0:24:69.22:0,69,1090	0/0:29,0:29:87.30:0,87,1419	0/0:23,0:23:66.23:0,66,1077	0/0:27,0:27:81.28:0,81,1316	0/0:26,0:26:69.24:0,69,1125	0/0:18,0:18:54.16:0,54,855	0/0:24,0:16:43.20:0,43,731	0/0:34,0:34:96.30:0,96,1517	0/0:18,0:18:51.17:0,51,814	0/0:26,0:26:78.24:0,78,1221	0/0:18,0:18:51.16:0,51,807	0/0:30,0:30:84.29:0,84,1366	0/0:13,0:13:39.13:0,39,636	1/1:3,14:16:40.67:595,41,0	0/0:43,0:43:99:0,126,2008	0/0:12,0:11:30.10:0,30,489
chr10	98050789	.	AAGG	A	420.26	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.697;DP=684;FS=0.000;HRun=0;HaplotypeScore=89.2064;InbreedingCoeff=0.8782;MQ=54.21;MQ0=34;MQRankSum=-0.498;QD=23.35;ReadPosRankSum=0.783;VQSLOD=3.5462;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:42.29:0,42,1749	0/0:9,0:9:24.08:0,24,542	0/0:28,0:4:12.04:0,12,295	0/0:28,0:2:6.02:0,6,147	0/0:36,0:36:99:0,108,2352	0/0:19,0:19:57.11:0,57,1320	0/0:24,0:23:63.14:0,63,1329	0/0:22,0:18:54.17:0,54,1255	0/0:25,0:25:72.25:0,72,1739	0/0:35,0:34:99:0,99,2363	0/0:25,0:25:75.21:0,75,1627	0/0:19,0:19:57.20:0,57,1376	0/0:23,0:23:69.17:0,69,1490	0/0:29,0:29:87.30:0,87,2119	0/0:23,0:23:69.22:0,69,1627	0/0:27,0:27:81.26:0,81,1875	0/0:26,0:26:72.23:0,72,1721	0/0:18,0:18:54.16:0,54,1277	0/0:25,0:16:48.16:0,48,1136	0/0:34,0:34:99:0,99,2224	0/0:19,0:19:54.08:0,54,1115	0/0:27,0:27:81.21:0,81,1775	0/0:18,0:18:54.09:0,54,1210	0/0:30,0:30:84.27:0,84,1978	0/0:13,0:13:39.13:0,39,961	1/1:4,14:17:32.27:515,32,0	0/0:42,0:42:99:0,126,3005	0/0:12,0:11:30.10:0,30,738
chr10	98050792	.	G	GTA	890.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.618;DP=694;FS=1.818;HRun=0;HaplotypeScore=79.0803;InbreedingCoeff=0.8734;MQ=54.28;MQ0=34;MQRankSum=0.440;QD=38.73;ReadPosRankSum=-1.210;VQSLOD=5.3498;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:69.12:0,69,901	0/0:7,0:7:18.06:0,18,246	0/0:27,0:4:12.04:0,12,165	0/0:29,0:2:6.02:0,6,82	0/0:34,0:34:81.27:0,81,1112	0/0:20,0:20:57.19:0,57,782	0/0:24,0:23:48.14:0,48,642	0/0:22,0:17:48.16:0,48,659	0/0:24,0:24:69.23:0,69,947	0/0:36,0:35:96.32:0,96,1319	0/0:25,0:25:66.22:0,66,907	0/0:19,0:19:54.17:0,54,726	0/0:22,0:22:66.22:0,66,907	0/0:28,0:28:78.25:0,78,1057	0/0:23,0:23:63.21:0,63,866	0/0:26,0:26:75.24:0,75,1015	0/0:28,0:28:75.18:0,75,991	0/0:19,0:19:48.41:0,48,696	0/0:24,0:16:42.12:0,42,560	0/0:33,0:33:99:0,99,1323	0/0:20,0:20:51.17:0,51,700	0/0:29,0:29:81.26:0,81,1097	0/0:20,0:20:57.16:0,57,760	0/0:29,0:29:78.26:0,78,1071	0/0:14,0:14:36.12:0,36,495	1/1:16,6:22:60.19:986,60,0	0/0:43,0:43:99:0,114,1566	0/0:16,0:15:27.03:0,27,304
chr10	98051848	.	CTCTT	C	183.45	PASS	AB=0.520;AC=1;AF=0.019;AN=54;BaseQRankSum=2.492;DP=549;FS=4.184;HRun=0;HaplotypeScore=88.5923;InbreedingCoeff=-0.0259;MQ=57.24;MQ0=20;MQRankSum=-1.046;QD=14.11;ReadPosRankSum=1.291;VQSLOD=3.0532;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.24:0,69,1751	0/0:7,0:7:18.06:0,18,475	./.	0/0:19,0:4:3.01:0,3,79	0/0:24,0:24:63.22:0,63,1626	0/0:15,0:15:45.15:0,45,1189	0/0:13,0:13:39.13:0,39,995	0/0:30,0:25:69.24:0,69,1715	0/0:19,0:18:45.15:0,45,1152	0/0:19,0:19:48.16:0,48,1267	0/0:26,0:25:75.26:0,75,1922	0/0:13,0:13:33.11:0,33,871	0/0:16,0:16:48.13:0,48,1146	0/0:8,0:8:24.08:0,24,605	0/0:14,0:14:39.13:0,39,990	0/0:8,0:8:21.07:0,21,525	0/0:25,0:25:57.18:0,57,1448	0/1:1,12:12:60.84:258,0,61	0/0:23,0:19:54.18:0,54,1345	0/0:38,0:38:99:0,105,2767	0/0:15,0:15:45.15:0,45,1183	0/0:24,0:24:69.24:0,69,1756	0/0:26,0:26:75.26:0,75,1975	0/0:16,0:16:48.16:0,48,1240	0/0:27,0:27:72.25:0,72,1874	0/0:29,0:29:81.28:0,81,2135	0/0:26,0:26:75.26:0,75,1915	0/0:18,0:18:54.19:0,54,1374
chr10	98061320	.	T	TAG	250.16	PASS	AB=0.910;AC=4;AF=0.083;AN=48;BaseQRankSum=-2.006;DP=577;DS;FS=5.653;HRun=0;HaplotypeScore=26.3011;InbreedingCoeff=0.3508;MQ=30.11;MQ0=162;MQRankSum=-3.097;QD=3.38;ReadPosRankSum=-0.796;VQSLOD=0.5258;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:12,0:10:15.05:0,15,228	0/0:26,0:2:6.02:0,6,66	0/0:23,0:2:0:0,0,0	0/1:25,2:20:24.46:24,0,337	0/0:27,0:15:15.05:0,15,219	0/0:17,0:8:3.01:0,3,46	1/1:27,12:5:15.05:288,15,0	0/0:23,0:16:27.09:0,27,402	0/0:18,0:15:39.07:0,39,592	0/0:22,0:16:23.91:0,24,307	0/0:24,0:16:12.04:0,12,182	0/0:18,0:12:12.04:0,12,182	0/0:24,0:14:24.08:0,24,364	0/0:20,0:14:24.08:0,24,364	./.	0/0:21,0:12:12.04:0,12,183	./.	0/0:38,0:7:21.07:0,21,321	0/0:26,1:21:27.02:0,27,383	0/0:17,2:12:12.04:0,12,183	0/0:24,0:15:29.93:0,30,398	0/0:24,0:10:11.87:0,12,118	0/0:24,0:16:18.06:0,18,274	0/0:14,0:8:9.03:0,9,137	0/1:7,1:4:45.63:46,0,125	0/0:40,1:25:39.09:0,39,592	./.
chr10	98062719	.	AG	A	927.26	PASS	AB=0.500;AC=27;AF=0.900;AN=30;BaseQRankSum=-2.563;DP=67;FS=12.304;HRun=6;HaplotypeScore=25.7461;InbreedingCoeff=0.3064;MQ=49.65;MQ0=5;MQRankSum=-2.858;QD=18.55;ReadPosRankSum=1.620;VQSLOD=1.6457;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,2:2:6.02:64,6,0	./.	0/0:8,1:3:6.73:0,7,49	1/1:0,2:2:6.02:64,6,0	./.	./.	1/1:3,11:9:18:181,18,0	1/1:0,2:2:6.02:64,6,0	./.	1/1:1,4:4:6.02:64,6,0	./.	0/1:0,2:2:0:0,0,0	1/1:1,2:2:6.02:64,6,0	1/1:0,1:1:3.01:32,3,0	./.	./.	1/1:0,1:1:3.01:32,3,0	1/1:0,7:7:18.04:193,18,0	./.	./.	./.	./.	./.	1/1:0,2:2:3.01:32,3,0	1/1:0,2:2:6.01:64,6,0	1/1:0,5:5:9.02:97,9,0	1/1:0,2:2:6.02:64,6,0
chr10	98062737	.	G	GAA	2878.65	PASS	AB=0.500;AC=37;AF=0.925;AN=40;BaseQRankSum=-2.221;DP=81;FS=0.000;HRun=1;HaplotypeScore=16.6731;InbreedingCoeff=0.2379;MQ=52.63;MQ0=1;MQRankSum=-0.298;QD=45.69;ReadPosRankSum=1.901;VQSLOD=3.4563;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,2:2:6.02:116,6,0	./.	0/0:7,0:3:2.99:0,3,42	1/1:0,2:2:6.02:116,6,0	1/1:0,1:1:3.01:58,3,0	./.	1/1:0,8:8:17.89:400,18,0	1/1:0,2:2:6.02:116,6,0	1/1:0,1:1:3.01:58,3,0	1/1:0,5:5:9.03:174,9,0	./.	0/1:0,2:2:0:0,0,0	1/1:1,5:5:15.01:251,15,0	1/1:0,4:4:12.04:232,12,0	./.	1/1:0,3:3:9.03:174,9,0	1/1:0,1:1:3.01:58,3,0	1/1:1,7:8:21.07:405,21,0	./.	./.	./.	1/1:0,2:2:3.01:58,3,0	1/1:0,1:1:3.01:58,3,0	1/1:0,4:4:9.03:174,9,0	1/1:0,2:2:6.02:116,6,0	1/1:0,6:6:12.04:231,12,0	1/1:0,3:3:9.03:174,9,0
chr10	98062797	.	AG	A	1371.83	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=4.987;DP=180;FS=4.573;HRun=1;HaplotypeScore=26.3772;InbreedingCoeff=0.6186;MQ=72.68;MQ0=1;MQRankSum=-4.318;QD=27.44;ReadPosRankSum=-1.573;VQSLOD=2.8370;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:5:15.05:207,15,0	0/0:3,0:3:8.98:0,9,72	0/1:7,0:5:13.46:13,0,79	0/0:4,0:4:5.60:0,6,18	0/0:5,0:4:15.02:0,15,175	0/0:4,0:4:12.03:0,12,150	0/0:1,0:1:3.01:0,3,42	1/1:1,24:24:69.03:817,69,0	0/0:5,0:5:15.05:0,15,204	0/0:9,0:9:27.08:0,27,351	0/0:8,0:8:18.06:0,18,250	0/0:4,0:4:9.03:0,9,126	0/0:4,0:4:9.03:0,9,124	0/0:9,0:8:24.07:0,24,309	0/0:3,0:3:9.03:0,9,126	0/0:5,0:4:9.03:0,9,126	0/0:6,0:6:18.04:0,18,232	0/0:6,0:6:18.05:0,18,231	0/0:13,0:13:36.11:0,36,501	0/0:6,0:6:15.04:0,15,192	0/0:2,0:2:6.02:0,6,84	./.	0/0:3,0:3:6.02:0,6,83	0/0:5,0:5:15.03:0,15,191	0/0:5,0:5:12.03:0,12,150	0/0:6,0:6:18.05:0,18,236	0/0:14,0:14:36.12:0,36,499	1/1:0,12:12:36.08:477,36,0
chr10	98063106	.	T	TAAGTTAAA	3524.22	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.561;DP=363;FS=20.407;HRun=0;HaplotypeScore=93.0636;InbreedingCoeff=0.9504;MQ=93.75;MQ0=0;MQRankSum=-6.924;QD=121.52;ReadPosRankSum=0.371;VQSLOD=3.7293;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,2:3:9.03:416,9,0	0/0:5,0:5:15.05:0,15,454	0/0:20,0:20:54.14:0,54,1398	0/0:14,0:14:42.11:0,42,1152	0/0:30,0:30:87.30:0,87,2594	0/0:15,0:15:42.14:0,42,1272	0/0:10,0:10:30.10:0,30,908	1/1:4,8:15:42.13:1587,42,0	0/0:12,0:12:33.10:0,33,934	0/0:21,0:21:60.20:0,60,1717	0/0:17,0:17:42.14:0,42,1257	0/0:4,0:4:12.04:0,12,363	0/0:8,0:8:24.08:0,24,727	0/0:15,0:15:45.15:0,45,1243	0/0:10,0:9:30.10:0,30,835	0/0:10,0:10:30.09:0,30,824	0/0:12,0:12:36.12:0,36,1002	0/0:7,0:7:20.81:0,21,525	0/0:19,0:19:54.19:0,54,1469	0/0:15,0:15:45.15:0,45,1349	0/0:5,0:4:15.05:0,15,453	0/0:6,0:6:18.06:0,18,512	0/0:10,0:10:30.05:0,30,729	0/0:10,0:10:24.08:0,24,685	0/0:14,0:14:42.13:0,42,1176	0/0:14,0:14:42.14:0,42,1250	0/0:31,0:30:93.27:0,93,2562	1/1:1,10:11:33.11:1522,33,0
chr10	98063146	.	AGAGT	A	803.27	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.994;DP=365;FS=0.000;HRun=0;HaplotypeScore=66.2161;InbreedingCoeff=0.9539;MQ=83.01;MQ0=0;MQRankSum=-0.621;QD=50.20;ReadPosRankSum=0.113;VQSLOD=3.5698;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:18.06:0,18,503	0/0:8,0:8:24.08:0,24,636	0/0:14,0:14:39.13:0,39,958	0/0:9,0:9:21.06:0,21,498	0/0:24,0:24:66.21:0,66,1728	0/0:18,0:18:54.19:0,54,1432	0/0:13,0:13:39.10:0,39,962	0/0:23,0:22:66.23:0,66,1781	0/0:13,0:13:39.12:0,39,1001	0/0:22,0:21:66.22:0,66,1740	0/0:11,0:11:30.08:0,30,691	0/0:6,0:6:18.06:0,18,503	0/0:13,0:13:39.10:0,39,961	0/0:12,0:12:36.12:0,36,938	0/0:15,0:15:42.14:0,42,1164	0/0:13,0:13:36.12:0,36,972	0/0:10,0:10:30.10:0,30,836	0/0:9,0:9:27.09:0,27,753	0/0:16,0:16:48.16:0,48,1312	0/0:16,0:16:48.16:0,48,1326	0/0:8,0:8:24.07:0,24,606	0/0:8,0:8:21.07:0,21,588	0/0:11,0:11:33.09:0,33,852	0/0:11,0:11:30.10:0,30,827	0/0:5,0:5:15.05:0,15,386	1/1:0,16:16:48.15:898,48,0	0/0:24,0:22:66.21:0,66,1786	0/0:10,0:10:27.09:0,27,693
chr10	98063212	.	G	GAC	1201.50	PASS	AB=0.817;AC=22;AF=0.423;AN=52;BaseQRankSum=0.350;DP=425;FS=0.686;HRun=0;HaplotypeScore=74.4627;InbreedingCoeff=0.0703;MQ=66.00;MQ0=7;MQRankSum=1.510;QD=5.44;ReadPosRankSum=-1.338;VQSLOD=2.6901;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:2.99:23,3,0	0/0:8,0:8:11.69:0,12,104	./.	./.	0/0:13,0:16:2.85:0,3,46	0/0:22,0:22:17.87:0,18,170	1/1:7,1:8:3.01:45,3,0	1/1:17,0:15:8.95:69,9,0	0/1:15,1:17:23.67:24,0,147	0/0:14,0:14:18.02:0,18,184	0/0:12,0:13:17.75:0,18,153	0/1:7,0:7:8.77:67,0,9	0/1:9,9:18:20.75:122,0,21	0/1:5,7:12:23.48:80,0,23	0/0:14,0:16:17.70:0,18,151	1/1:4,10:14:23.66:355,24,0	0/0:16,0:18:6.08:0,6,147	1/1:12,0:10:8.39:85,8,0	0/0:15,0:16:5.85:0,6,46	0/0:15,1:18:1.23:0,1,137	0/1:16,1:17:36.64:37,0,49	0/1:9,9:18:34.86:179,0,35	0/1:10,4:13:15.24:80,0,15	0/1:8,9:18:20.92:122,0,21	0/1:10,0:12:4.23:4,0,127	1/1:11,0:11:6.01:55,6,0	0/0:14,0:15:38.72:0,39,365	0/1:7,0:9:8.09:20,0,8
chr10	98066143	.	G	GTCTA	8393.51	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-6.682;DP=672;FS=3.243;HRun=0;HaplotypeScore=102.7617;InbreedingCoeff=0.9629;MQ=81.07;MQ0=0;MQRankSum=-5.450;QD=57.10;ReadPosRankSum=-0.138;VQSLOD=6.3754;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,16:20:27.09:725,27,0	0/0:7,0:7:18.06:0,18,341	0/0:25,0:25:62.94:0,63,1121	0/0:19,0:19:47.63:0,48,729	0/0:31,0:31:90.20:0,90,1480	0/0:26,0:26:75.20:0,75,1323	0/0:18,0:18:51.17:0,51,964	1/1:1,34:36:99:2292,102,0	0/0:18,0:18:54.17:0,54,977	0/0:32,0:32:90.26:0,90,1561	0/0:24,0:24:72.21:0,72,1281	0/0:19,0:19:57.18:0,57,1041	0/0:23,0:23:63.18:0,63,1091	0/0:21,0:21:63.20:0,63,1162	0/0:25,0:25:72.22:0,72,1285	1/1:3,22:25:3.28:1480,3,0	0/0:24,0:24:66.19:0,66,1173	1/1:0,15:16:27.09:729,27,0	0/0:24,0:24:66.21:0,66,1204	0/0:30,0:30:90.25:0,90,1546	0/0:24,0:24:72.19:0,72,1267	0/0:32,0:32:84.27:0,84,1543	0/0:29,0:29:84.24:0,84,1545	0/0:18,0:18:48.10:0,48,841	0/0:22,0:22:60.16:0,60,1035	1/1:2,39:42:60.29:2520,60,0	0/0:34,0:33:93.27:0,93,1656	1/1:0,8:8:24.08:647,24,0
chr10	98066832	.	C	CTGGTTGGT	3487.27	PASS	AB=0.750;AC=11;AF=0.204;AN=54;BaseQRankSum=4.788;DP=570;FS=13.960;HRun=0;HaplotypeScore=148.9891;InbreedingCoeff=0.8093;MQ=73.47;MQ0=1;MQRankSum=-4.254;QD=23.25;ReadPosRankSum=-3.419;VQSLOD=1.8894;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:29:21.07:638,21,0	0/0:12,0:12:24.07:0,24,556	0/0:28,0:21:9.01:0,9,159	0/0:22,0:19:7.26:0,7,176	0/0:18,0:18:33.04:0,33,693	1/1:6,0:17:29.93:241,30,0	0/0:19,0:19:36.12:0,36,863	1/1:31,0:30:24.06:436,24,0	0/0:14,0:14:30.10:0,30,742	0/0:34,0:34:75.26:0,75,1857	0/0:19,0:19:39.10:0,39,864	0/0:13,0:13:21.07:0,21,531	0/0:17,0:17:39.10:0,39,815	0/0:26,0:26:42.11:0,42,958	0/0:18,0:18:36.12:0,36,909	1/1:18,0:22:15.05:466,15,0	0/0:17,0:17:33.11:0,33,794	1/1:17,0:24:3.38:800,3,0	0/0:12,0:13:15.04:0,15,309	0/0:21,0:21:39.13:0,39,955	0/0:23,0:23:42.14:0,42,1018	0/0:21,0:21:39.13:0,39,986	0/0:18,0:18:27.09:0,27,665	0/0:20,0:20:51.17:0,51,1237	0/0:18,0:18:36.12:0,36,910	0/1:18,7:27:21.09:907,0,21	0/0:22,0:22:48.10:0,48,1039	./.
chr10	98066952	.	G	GCC	993.96	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.728;DP=548;FS=3.965;HRun=8;HaplotypeScore=79.6379;InbreedingCoeff=0.9664;MQ=87.89;MQ0=0;MQRankSum=-4.333;QD=14.00;ReadPosRankSum=-0.676;VQSLOD=1.1301;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,15:30:54.11:770,54,0	0/0:5,0:5:12.02:0,12,134	0/0:21,0:21:51.03:0,51,520	0/0:23,0:23:54.10:0,54,580	0/0:24,0:24:69.18:0,69,769	0/0:18,0:18:42.08:0,42,467	0/0:18,0:18:48.13:0,48,535	0/0:21,0:22:20.99:0,21,224	0/0:20,0:20:48.08:0,48,525	0/0:27,0:27:60.10:0,60,646	0/0:19,0:20:56.88:0,57,613	0/0:17,0:17:48.12:0,48,535	0/0:9,0:9:24.06:0,24,268	0/0:26,0:26:72.13:0,72,773	0/0:14,0:14:42.10:0,42,459	1/1:10,0:12:15.03:167,15,0	0/0:20,0:20:57.11:0,57,614	1/1:3,0:19:32.44:111,32,0	0/0:28,0:28:72.17:0,72,802	0/0:24,0:24:54.11:0,54,601	0/0:22,0:22:51.10:0,51,559	0/0:26,0:27:71.91:0,72,781	0/0:20,0:20:51.11:0,51,557	0/0:19,0:19:51.13:0,51,569	0/0:26,0:26:63.13:0,63,702	1/1:5,1:10:9.01:100,9,0	0/0:20,0:18:39.04:0,39,432	0/0:7,0:7:18.04:0,18,198
chr10	98067007	.	T	TA	1583.25	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-2.579;DP=649;FS=4.525;HRun=5;HaplotypeScore=62.7771;InbreedingCoeff=0.9977;MQ=84.74;MQ0=0;MQRankSum=-4.259;QD=29.87;ReadPosRankSum=-1.041;VQSLOD=3.8396;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:69.18:888,69,0	0/0:11,0:11:33.08:0,33,355	0/0:18,0:18:39.09:0,39,409	0/0:27,0:27:72.12:0,72,743	0/0:37,0:37:99:0,111,1167	0/0:24,0:24:69.15:0,69,731	0/0:19,0:19:57.14:0,57,612	1/1:1,16:17:45.12:561,45,0	0/0:28,0:28:72.13:0,72,753	0/0:29,0:29:74.39:0,74,774	0/0:34,0:34:99:0,102,1071	0/0:25,0:25:60.15:0,60,645	0/0:19,0:19:51.10:0,51,533	0/0:25,0:25:69.17:0,69,741	0/0:27,0:27:75.18:0,75,806	0/0:15,0:15:45.11:0,45,477	0/0:26,0:26:75.16:0,75,795	0/0:8,0:8:24.06:0,24,257	0/0:32,0:32:90.20:0,90,955	0/0:29,0:29:84.21:0,84,901	0/0:22,0:22:66.17:0,66,709	0/0:26,0:26:75.19:0,75,806	0/0:23,0:23:69.16:0,69,733	0/0:20,0:20:57.14:0,57,612	0/0:20,0:20:60.15:0,60,639	0/0:25,0:25:69.17:0,69,741	0/0:27,0:25:78.17:0,78,827	1/1:1,8:9:21.07:276,21,0
chr10	98069691	.	GAA	G	1365.99	PASS	AB=0.783;AC=10;AF=0.179;AN=56;BaseQRankSum=8.299;DP=533;FS=6.248;HRun=13;HaplotypeScore=74.5003;InbreedingCoeff=0.7250;MQ=68.80;MQ0=0;MQRankSum=-0.472;QD=12.89;ReadPosRankSum=0.594;VQSLOD=2.4803;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:34:67.14:0,67,618	0/0:11,0:11:30.10:0,30,434	0/0:11,0:9:2.96:0,3,74	0/1:8,0:6:15.35:19,0,15	0/0:27,0:28:60.25:0,60,798	0/0:28,0:34:75.38:0,75,915	0/0:19,0:19:54.15:0,54,748	1/1:7,25:32:75.02:706,75,0	0/0:12,0:12:33.11:0,33,477	0/0:13,0:15:33.01:0,33,387	0/0:19,0:24:67.49:0,67,806	0/0:15,0:16:38.60:0,39,512	0/0:15,0:15:30.07:0,30,371	0/0:17,0:18:48.14:0,48,659	0/0:17,0:17:39.12:0,39,546	1/1:3,12:16:29.55:323,30,0	0/0:16,0:18:49.61:0,50,598	0/1:4,5:17:74.01:108,0,74	0/0:22,0:23:66.18:0,66,889	0/0:22,0:26:69.12:0,69,885	0/0:15,0:18:53.09:0,53,602	0/0:23,0:24:60.11:0,60,787	0/0:22,0:22:51.14:0,51,687	0/0:14,0:14:36.11:0,36,502	0/0:12,0:14:30.02:0,30,497	1/1:8,0:25:48.17:205,48,0	0/0:11,0:13:27.07:0,27,343	1/1:2,5:7:18.02:174,18,0
chr10	98070758	.	T	TACACATGC	2046.18	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.426;DP=682;FS=12.228;HRun=0;HaplotypeScore=170.8668;InbreedingCoeff=0.8906;MQ=81.53;MQ0=2;MQRankSum=-4.178;QD=44.48;ReadPosRankSum=-4.007;VQSLOD=1.9482;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:84.29:0,84,2066	0/0:13,0:13:30.10:0,30,769	0/0:32,0:25:16.62:0,17,220	0/0:35,0:30:1.96:0,2,216	0/0:37,0:37:78.22:0,78,1772	0/0:21,0:21:57.18:0,57,1394	0/0:17,0:17:24.08:0,24,609	1/1:29,0:30:33.11:1037,33,0	0/0:22,0:22:48.13:0,48,1091	0/0:24,0:24:60.21:0,60,1503	0/0:39,0:39:78.25:0,78,1902	0/0:24,0:24:48.12:0,48,1135	0/0:21,0:21:39.12:0,39,927	0/0:28,0:28:60.17:0,60,1373	0/0:13,0:13:39.13:0,39,973	0/0:7,0:7:15.05:0,15,384	0/0:17,0:17:39.13:0,39,967	0/0:29,0:29:53.31:0,53,1339	0/0:27,0:27:60.13:0,60,1319	0/0:24,0:24:48.12:0,48,1169	0/0:28,0:28:66.12:0,66,1547	0/0:21,0:21:42.10:0,42,988	0/0:13,0:13:33.06:0,33,747	0/0:28,0:28:60.17:0,60,1419	0/0:28,0:28:60.21:0,60,1494	0/0:23,0:23:45.15:0,45,1078	0/0:21,0:21:57.20:0,57,1461	1/1:10,6:16:30.10:1130,30,0
chr10	98070793	.	GCA	G	831.53	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.480;DP=612;FS=2.552;HRun=0;HaplotypeScore=84.2220;InbreedingCoeff=0.9262;MQ=66.83;MQ0=3;MQRankSum=0.021;QD=21.88;ReadPosRankSum=-1.228;VQSLOD=3.8591;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:87.25:0,87,1388	0/0:11,0:11:24.08:0,24,408	0/0:19,0:12:16.58:0,17,180	0/0:17,1:10:5.84:0,6,42	0/0:37,0:37:99:0,99,1590	0/0:21,0:21:42.14:0,42,699	0/0:15,0:15:39.09:0,39,583	1/1:5,17:22:50.89:578,51,0	0/0:24,0:24:66.23:0,66,1121	0/0:27,0:27:75.24:0,75,1210	0/0:37,0:37:99:0,105,1740	0/0:20,0:20:51.16:0,51,840	0/0:18,0:18:36.06:0,36,505	0/0:20,0:20:57.17:0,57,916	0/0:18,0:18:54.18:0,54,911	0/0:6,0:6:12.04:0,12,204	0/0:18,0:18:42.13:0,42,686	0/0:21,0:21:60.14:0,60,951	0/0:18,0:18:54.15:0,54,821	0/0:22,0:22:63.20:0,63,1044	0/0:33,0:33:93.29:0,93,1505	0/0:15,0:15:42.13:0,42,688	0/0:19,0:19:48.15:0,48,780	0/0:23,0:23:63.18:0,63,1011	0/0:32,0:32:84.26:0,84,1365	0/0:25,0:25:72.24:0,72,1198	0/0:20,0:20:48.15:0,48,788	1/1:4,12:16:30.09:375,30,0
chr10	98072037	.	CAGAT	C	1514.22	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.608;DP=769;FS=0.686;HRun=0;HaplotypeScore=124.2104;InbreedingCoeff=0.9992;MQ=83.84;MQ0=0;MQRankSum=-5.390;QD=37.86;ReadPosRankSum=-1.873;VQSLOD=3.5402;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,2850	0/0:12,0:12:27.09:0,27,720	0/0:29,0:29:78.25:0,78,1854	0/0:27,0:26:52.36:0,52,1328	0/0:31,0:31:87.26:0,87,2190	0/0:18,0:18:51.16:0,51,1268	0/0:20,0:20:54.17:0,54,1377	1/1:6,20:26:57.17:1021,57,0	0/0:37,0:37:99:0,108,2733	0/0:28,0:28:81.28:0,81,2146	0/0:32,0:32:84.27:0,84,2145	0/0:21,0:21:57.20:0,57,1459	0/0:29,0:29:87.21:0,87,2176	0/0:26,0:26:78.24:0,78,1949	0/0:41,0:41:99:0,114,2966	0/0:31,0:31:87.26:0,87,2224	0/0:32,0:32:96.30:0,96,2502	0/0:12,0:12:33.11:0,33,880	0/0:26,0:25:75.26:0,75,1839	0/0:30,0:30:84.25:0,84,2144	0/0:42,0:42:99:0,120,3097	0/0:19,0:19:54.17:0,54,1375	0/0:21,0:21:54.13:0,54,1432	0/0:28,0:28:75.26:0,75,1999	0/0:21,0:21:60.21:0,60,1584	0/0:40,0:40:99:0,114,2994	0/0:37,0:37:96.31:0,96,2440	1/1:2,12:14:33.11:615,33,0
chr10	98072417	.	C	CT	2295.33	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=14.396;DP=472;FS=5.138;HRun=0;HaplotypeScore=63.4812;InbreedingCoeff=0.9357;MQ=60.34;MQ0=8;MQRankSum=-2.263;QD=16.16;ReadPosRankSum=0.110;VQSLOD=5.4820;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,7:24:61.27:499,61,0	0/0:10,0:10:27.09:0,27,377	0/1:14,0:8:0.92:1,0,187	0/0:8,0:5:12.04:0,12,169	0/0:17,0:17:51.17:0,51,710	0/0:23,0:23:69.23:0,69,964	0/0:14,0:14:33.10:0,33,444	1/1:8,10:15:32.69:227,33,0	0/0:14,0:14:39.13:0,39,545	0/0:27,0:27:81.24:0,81,1096	0/0:21,0:21:63.20:0,63,865	0/0:8,0:8:24.07:0,24,318	0/0:12,0:12:36.11:0,36,486	0/0:13,0:12:36.11:0,36,485	0/0:9,0:9:27.09:0,27,377	1/1:10,5:15:38.05:399,38,0	0/0:25,0:25:63.21:0,63,879	1/1:22,0:20:30.45:118,30,0	0/0:18,0:16:48.13:0,48,650	0/0:21,0:21:63.20:0,63,863	0/0:19,0:18:54.18:0,54,754	0/0:11,0:11:30.10:0,30,419	0/0:10,0:10:30.10:0,30,419	0/0:14,0:13:39.13:0,39,533	0/0:16,0:16:48.12:0,48,634	1/1:17,5:22:23.97:668,24,0	0/0:20,0:19:60.20:0,60,837	1/1:20,4:23:58.52:570,59,0
chr10	98072419	.	CA	C	2144.92	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.370;DP=483;FS=4.996;HRun=2;HaplotypeScore=66.8458;InbreedingCoeff=0.9934;MQ=61.59;MQ0=5;MQRankSum=-4.808;QD=16.37;ReadPosRankSum=0.531;VQSLOD=3.5719;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,10:26:54.21:386,54,0	0/0:10,0:10:30.10:0,30,450	0/0:15,0:8:17.92:0,18,198	0/0:9,0:6:15.03:0,15,192	0/0:18,0:18:54.17:0,54,790	0/0:23,0:23:69.22:0,69,1013	0/0:12,0:12:33.07:0,33,469	1/1:9,10:16:32.90:165,33,0	0/0:14,0:14:42.14:0,42,629	0/0:27,0:27:78.26:0,78,1163	0/0:22,0:22:63.21:0,63,944	0/0:10,0:10:30.09:0,30,426	0/0:14,0:14:42.09:0,42,580	0/0:14,0:13:39.12:0,39,566	0/0:9,0:9:27.09:0,27,405	1/1:9,6:15:26.09:289,26,0	0/0:27,0:27:69.21:0,69,996	1/1:20,3:22:59.92:596,60,0	0/0:17,0:15:45.15:0,45,675	0/0:21,0:21:63.21:0,63,944	0/0:19,0:19:57.13:0,57,803	0/0:11,0:11:30.08:0,30,429	0/0:10,0:10:30.10:0,30,450	0/0:13,0:13:39.13:0,39,584	0/0:17,0:17:51.17:0,51,759	1/1:18,5:23:22.05:503,22,0	0/0:20,0:19:60.20:0,60,899	1/1:19,5:23:51.54:393,52,0
chr10	98072623	.	GT	G	4786.86	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.356;DP=556;FS=26.679;HRun=2;HaplotypeScore=63.0963;InbreedingCoeff=0.9690;MQ=73.13;MQ0=0;MQRankSum=-2.477;QD=35.46;ReadPosRankSum=1.852;VQSLOD=2.8924;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,30:36:99:1342,105,0	0/0:11,0:11:33.11:0,33,494	0/0:11,0:11:33.07:0,33,470	0/0:7,0:8:4.59:0,5,173	0/0:20,0:20:54.18:0,54,809	0/0:22,0:22:66.20:0,66,939	0/0:23,0:23:69.23:0,69,1024	1/1:0,27:27:81.24:1035,81,0	0/0:14,0:14:39.13:0,39,583	0/0:21,0:21:63.21:0,63,928	0/0:17,0:17:51.16:0,51,743	0/0:13,0:13:39.13:0,39,583	0/0:11,0:11:33.10:0,33,473	0/0:25,0:25:75.25:0,75,1124	0/0:25,0:25:75.25:0,75,1123	1/1:0,21:21:60.19:775,60,0	0/0:34,0:34:99:0,99,1420	1/1:1,18:19:48.16:623,48,0	0/0:19,0:19:54.18:0,54,802	0/0:23,0:23:66.21:0,66,969	0/0:25,0:25:75.25:0,75,1123	0/0:13,0:13:39.13:0,39,585	0/0:14,0:14:42.14:0,42,618	0/0:21,0:21:63.21:0,63,943	0/0:15,0:15:45.15:0,45,674	0/0:22,0:22:63.21:0,63,944	0/0:14,0:14:42.14:0,42,628	1/1:0,32:32:78.25:1012,78,0
chr10	98072700	.	TG	T	2253.35	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.122;DP=616;FS=2.248;HRun=2;HaplotypeScore=81.1780;InbreedingCoeff=0.9999;MQ=84.94;MQ0=0;MQRankSum=-3.327;QD=33.63;ReadPosRankSum=2.033;VQSLOD=4.0192;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:93.30:1203,93,0	0/0:16,0:16:48.15:0,48,689	0/0:18,0:18:52.36:0,52,654	0/0:24,0:24:61.52:0,62,895	0/0:17,0:17:51.17:0,51,762	0/0:25,0:25:75.24:0,75,1098	0/0:30,0:30:87.29:0,87,1302	0/0:29,0:29:84.23:0,84,1216	0/0:20,0:20:57.18:0,57,835	0/0:25,0:25:75.24:0,75,1105	0/0:21,0:21:57.19:0,57,851	0/0:26,0:26:78.26:0,78,1168	0/0:23,0:23:66.22:0,66,987	0/0:20,0:20:60.20:0,60,899	0/0:20,0:20:60.18:0,60,857	1/1:1,14:15:45.13:570,45,0	0/0:29,0:29:87.28:0,87,1279	1/1:0,18:18:48.16:623,48,0	0/0:12,0:12:33.10:0,33,475	0/0:23,0:23:66.20:0,66,949	0/0:26,0:26:78.26:0,78,1167	0/0:22,0:22:63.21:0,63,943	0/0:22,0:22:63.21:0,63,930	0/0:20,0:20:60.19:0,60,878	0/0:14,0:14:42.14:0,42,628	0/0:19,0:19:57.19:0,57,848	0/0:20,0:20:57.16:0,57,808	0/0:28,0:28:72.24:0,72,1076
chr10	98073135	.	GTC	G	866.85	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.674;DP=651;FS=2.865;HRun=0;HaplotypeScore=74.5325;InbreedingCoeff=0.9267;MQ=86.73;MQ0=0;MQRankSum=-2.304;QD=32.11;ReadPosRankSum=0.807;VQSLOD=5.6376;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.29:0,84,1704	0/0:8,0:8:24.08:0,24,487	0/0:25,0:25:72.25:0,72,1441	0/0:18,0:18:47.93:0,48,863	0/0:37,0:37:99:0,108,2102	0/0:30,0:30:90.29:0,90,1775	0/0:20,0:20:60.17:0,60,1144	0/0:40,0:40:99:0,120,2423	0/0:14,0:14:42.14:0,42,823	0/0:22,0:22:66.23:0,66,1327	0/0:15,0:15:38.67:0,39,792	0/0:22,0:22:63.20:0,63,1242	0/0:21,0:21:60.19:0,60,1157	0/0:22,0:22:66.23:0,66,1341	0/0:26,0:26:78.24:0,78,1512	1/1:2,25:27:8.31:949,8,0	0/0:28,0:28:84.29:0,84,1687	0/0:15,0:15:45.15:0,45,914	0/0:21,0:21:63.22:0,63,1253	0/0:32,0:32:96.33:0,96,1950	0/0:27,0:27:78.27:0,78,1583	0/0:22,0:22:66.21:0,66,1303	0/0:30,0:30:90.31:0,90,1826	0/0:23,0:23:69.24:0,69,1401	0/0:16,0:16:48.15:0,48,930	0/0:23,0:23:69.24:0,69,1402	0/0:26,0:25:78.24:0,78,1499	0/0:12,0:12:36.12:0,36,731
chr10	98073574	.	TTTG	T	563.30	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=5.795;DP=594;FS=14.875;HRun=0;HaplotypeScore=89.1429;InbreedingCoeff=0.6732;MQ=77.49;MQ0=0;MQRankSum=-0.370;QD=13.74;ReadPosRankSum=-0.125;VQSLOD=1.9176;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:22:42.12:657,42,0	0/0:5,0:5:15.05:0,15,325	0/1:17,0:17:6.62:7,0,535	0/0:24,0:23:13.53:0,14,547	0/0:48,0:48:99:0,138,2862	0/0:17,0:17:42.14:0,42,869	0/0:14,0:14:39.13:0,39,796	0/0:26,0:26:63.22:0,63,1346	0/0:19,0:19:57.20:0,57,1217	0/0:27,0:27:66.23:0,66,1420	0/0:28,0:28:81.27:0,81,1695	0/0:11,0:11:33.11:0,33,675	0/0:12,0:12:33.11:0,33,687	0/0:19,0:19:54.19:0,54,1127	0/0:15,0:15:42.14:0,42,909	0/0:26,0:26:75.26:0,75,1601	0/0:23,0:23:63.22:0,63,1333	0/0:17,0:17:48.14:0,48,966	0/0:24,0:24:60.21:0,60,1225	0/0:27,0:27:81.28:0,81,1747	0/0:11,0:11:30.10:0,30,628	0/0:20,0:20:54.17:0,54,1072	0/0:25,0:25:69.24:0,69,1473	0/0:10,0:10:30.10:0,30,647	0/0:22,0:22:60.20:0,60,1250	0/0:28,0:28:84.29:0,84,1780	0/0:42,0:41:99:0,114,2411	0/0:11,0:11:30.08:0,30,570
chr10	98073679	.	GTGAC	G	505.64	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=4.989;DP=597;FS=2.547;HRun=0;HaplotypeScore=96.3667;InbreedingCoeff=0.6629;MQ=74.84;MQ0=0;MQRankSum=-2.109;QD=17.44;ReadPosRankSum=0.398;VQSLOD=3.2853;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,3157	0/0:9,0:9:24.07:0,24,575	0/0:14,0:14:42.07:0,42,895	0/1:9,0:9:11.14:11,0,399	0/0:30,0:30:84.26:0,84,2075	0/0:27,0:27:75.26:0,75,1927	0/0:19,0:19:51.18:0,51,1303	0/0:28,0:28:78.26:0,78,1892	0/0:19,0:19:51.18:0,51,1301	0/0:27,0:27:69.24:0,69,1775	0/0:26,0:26:72.25:0,72,1882	0/0:15,0:15:42.14:0,42,1033	0/0:26,0:26:69.24:0,69,1796	0/0:18,0:18:48.14:0,48,1180	0/0:23,0:23:63.22:0,63,1650	1/1:4,16:20:32.82:597,33,0	0/0:22,0:22:57.20:0,57,1493	0/0:14,0:14:39.12:0,39,951	0/0:13,0:13:33.11:0,33,838	0/0:32,0:32:93.32:0,93,2326	0/0:33,0:33:93.32:0,93,2417	0/0:13,0:13:36.12:0,36,943	0/0:21,0:21:60.21:0,60,1538	0/0:10,0:10:27.09:0,27,697	0/0:18,0:18:51.18:0,51,1332	0/0:24,0:24:72.24:0,72,1802	0/0:35,0:35:96.33:0,96,2444	0/0:9,0:9:27.09:0,27,707
chr10	98076327	.	T	TAC	2034.98	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-10.574;DP=779;FS=6.744;HRun=0;HaplotypeScore=93.4527;InbreedingCoeff=0.9945;MQ=81.74;MQ0=0;MQRankSum=-1.348;QD=40.70;ReadPosRankSum=-1.898;VQSLOD=4.4359;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,162,2065	0/0:11,0:11:33.11:0,33,429	0/0:33,0:32:70.71:0,71,840	0/0:32,0:31:65.88:0,66,822	0/0:18,0:18:45.13:0,45,559	0/0:24,0:24:60.19:0,60,780	0/0:41,0:41:99:0,102,1313	1/1:4,32:36:98.91:1595,99,0	0/0:31,0:30:81.26:0,81,1054	0/0:22,0:22:60.19:0,60,778	0/0:11,0:11:24.08:0,24,311	0/0:27,0:27:72.23:0,72,934	0/0:30,0:30:81.25:0,81,1036	0/0:31,0:31:81.26:0,81,1051	0/0:30,0:30:87.27:0,87,1115	0/0:26,0:26:72.22:0,72,922	0/0:27,0:27:57.14:0,57,722	0/0:21,0:21:60.17:0,60,763	0/0:21,0:21:48.15:0,48,624	0/0:21,0:21:57.17:0,57,728	0/0:66,0:66:99:0,175,2200	0/0:30,0:30:81.26:0,81,1051	0/0:7,0:7:18.06:0,18,234	0/0:43,0:43:99:0,111,1443	0/0:17,0:17:42.14:0,42,546	0/0:21,0:21:57.19:0,57,739	0/0:29,0:29:81.25:0,81,1037	1/1:0,12:14:33.11:561,33,0
chr10	98077387	.	A	AG	1334.53	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.292;DP=605;FS=5.968;HRun=0;HaplotypeScore=67.5923;InbreedingCoeff=0.9956;MQ=80.39;MQ0=0;MQRankSum=-4.204;QD=32.55;ReadPosRankSum=-0.008;VQSLOD=2.8967;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:20:52.35:613,52,0	0/0:6,0:6:18.06:0,18,252	0/0:11,0:11:33.06:0,33,423	0/0:19,0:19:39.54:0,40,670	0/0:31,0:31:93.30:0,93,1285	0/0:20,0:20:60.20:0,60,836	0/0:21,0:21:63.21:0,63,881	0/0:28,0:28:84.28:0,84,1175	0/0:27,0:27:81.26:0,81,1117	0/0:31,0:31:93.29:0,93,1254	0/0:15,0:15:45.14:0,45,606	0/0:27,0:27:81.25:0,81,1096	0/0:22,0:22:66.20:0,66,904	0/0:17,0:17:48.16:0,48,671	0/0:25,0:25:75.23:0,75,1017	1/1:1,20:21:63.19:844,63,0	0/0:31,0:31:93.30:0,93,1280	0/0:20,0:20:60.20:0,60,835	0/0:19,0:19:57.18:0,57,778	0/0:31,0:31:93.30:0,93,1283	0/0:21,0:21:60.14:0,60,799	0/0:15,0:15:45.13:0,45,585	0/0:17,0:17:51.16:0,51,698	0/0:14,0:14:39.13:0,39,545	0/0:18,0:17:54.18:0,54,755	0/0:28,0:28:84.26:0,84,1128	0/0:34,0:34:99:0,102,1393	0/0:16,0:16:48.16:0,48,671
chr10	98077389	.	GA	G	674.98	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.360;DP=612;FS=10.149;HRun=4;HaplotypeScore=71.1195;InbreedingCoeff=0.9975;MQ=81.34;MQ0=0;MQRankSum=-3.695;QD=16.07;ReadPosRankSum=0.368;VQSLOD=2.3097;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:21:51.65:348,52,0	0/0:7,0:7:21.07:0,21,313	0/0:12,0:12:30.10:0,30,441	0/0:20,0:20:53.15:0,53,702	0/0:31,0:31:93.30:0,93,1374	0/0:21,0:21:60.20:0,60,898	0/0:21,0:21:63.20:0,63,926	0/0:30,0:30:90.29:0,90,1328	0/0:27,0:27:81.27:0,81,1210	0/0:30,0:30:87.29:0,87,1287	0/0:13,0:13:36.12:0,36,540	0/0:27,0:27:75.24:0,75,1099	0/0:22,0:22:66.22:0,66,977	0/0:17,0:17:51.17:0,51,763	0/0:26,0:26:78.25:0,78,1148	1/1:1,20:21:61.79:449,62,0	0/0:31,0:31:93.31:0,93,1386	0/0:20,0:20:57.19:0,57,854	0/0:19,0:19:57.14:0,57,808	0/0:32,0:32:96.33:0,96,1436	0/0:23,0:23:69.16:0,69,968	0/0:14,0:14:42.11:0,42,589	0/0:17,0:17:51.17:0,51,764	0/0:14,0:14:42.14:0,42,628	0/0:19,0:18:57.19:0,57,837	0/0:27,0:27:81.26:0,81,1194	0/0:34,0:34:99:0,102,1517	0/0:16,0:16:48.15:0,48,698
chr10	98077393	.	TTC	T	1573.35	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.182;DP=612;FS=8.707;HRun=0;HaplotypeScore=79.4753;InbreedingCoeff=0.9976;MQ=79.45;MQ0=0;MQRankSum=-4.255;QD=38.37;ReadPosRankSum=1.022;VQSLOD=5.1541;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:21:51.17:763,51,0	0/0:7,0:7:21.06:0,21,391	0/0:11,0:11:33.11:0,33,583	0/0:18,0:18:41.68:0,42,839	0/0:30,0:30:90.30:0,90,1794	0/0:21,0:21:63.20:0,63,1232	0/0:20,0:20:60.20:0,60,1166	0/0:30,0:30:90.29:0,90,1695	0/0:27,0:27:81.25:0,81,1570	0/0:29,0:29:87.29:0,87,1730	0/0:13,0:13:39.12:0,39,742	0/0:24,0:24:72.21:0,72,1357	0/0:23,0:23:69.22:0,69,1344	0/0:18,0:18:54.17:0,54,1052	0/0:28,0:28:84.29:0,84,1675	1/1:0,20:20:60.20:932,60,0	0/0:32,0:32:96.29:0,96,1892	0/0:20,0:20:60.17:0,60,1143	0/0:18,0:18:54.19:0,54,1091	0/0:34,0:34:99:0,102,2002	0/0:27,0:27:81.22:0,81,1550	0/0:12,0:12:36.12:0,36,722	0/0:18,0:18:54.17:0,54,1061	0/0:14,0:14:42.14:0,42,813	0/0:19,0:18:57.20:0,57,1158	0/0:27,0:27:81.27:0,81,1607	0/0:36,0:36:99:0,108,2120	0/0:15,0:15:45.15:0,45,914
chr10	98079619	.	TTTAGGTAA	T	3099.07	PASS	AB=0.525;AC=3;AF=0.054;AN=56;BaseQRankSum=9.782;DP=591;FS=2.056;HRun=0;HaplotypeScore=147.1553;InbreedingCoeff=0.6420;MQ=83.08;MQ0=0;MQRankSum=-10.427;QD=56.35;ReadPosRankSum=1.868;VQSLOD=3.7738;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:34:72.25:1899,72,0	0/0:8,0:8:18.06:0,18,769	0/0:17,0:17:48.16:0,48,1899	0/0:20,0:20:48.16:0,48,1605	0/0:33,0:33:90.30:0,90,3740	0/0:20,0:20:60.21:0,60,2537	0/0:15,0:15:42.14:0,42,1767	0/0:34,0:33:99:0,99,4099	0/0:22,0:22:63.22:0,63,2667	0/0:19,0:19:51.18:0,51,2216	0/0:27,0:27:81.28:0,81,3389	0/0:19,0:19:57.20:0,57,2335	0/0:11,0:11:33.11:0,33,1380	0/0:17,0:17:48.16:0,48,2101	0/0:19,0:19:57.20:0,57,2376	0/1:2,19:21:81.34:1307,0,81	0/0:35,0:35:96.33:0,96,4151	0/0:24,0:24:69.24:0,69,3010	0/0:28,0:28:81.27:0,81,3164	0/0:23,0:23:63.19:0,63,2312	0/0:7,0:7:21.07:0,21,875	0/0:15,0:15:45.15:0,45,1944	0/0:14,0:14:39.13:0,39,1701	0/0:24,0:24:69.24:0,69,2971	0/0:25,0:25:72.24:0,72,2847	0/0:26,0:26:78.26:0,78,2636	0/0:22,0:22:63.22:0,63,2688	0/0:12,0:12:36.12:0,36,1430
chr10	98080575	.	GA	G	2104.16	PASS	AB=0.944;AC=11;AF=0.196;AN=56;BaseQRankSum=12.990;DP=677;FS=1.647;HRun=10;HaplotypeScore=73.6587;InbreedingCoeff=0.8646;MQ=64.20;MQ0=2;MQRankSum=-3.735;QD=11.63;ReadPosRankSum=0.529;VQSLOD=3.2956;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:41:24.01:101,24,0	0/0:17,0:17:42.11:0,42,465	0/1:16,1:11:9.94:10,0,154	0/0:9,0:8:3.68:0,4,117	0/0:37,2:39:73.16:0,73,1003	0/0:20,0:19:51.03:0,51,547	0/0:23,0:23:66.17:0,66,725	1/1:2,35:37:99:914,107,0	0/0:12,0:12:30.03:0,30,310	0/0:30,0:30:75.19:0,75,823	0/0:19,0:19:45.11:0,45,490	0/0:19,0:19:54.14:0,54,590	0/0:19,0:19:48.13:0,48,531	0/0:18,0:18:45.11:0,45,489	0/0:25,0:25:57.14:0,57,623	1/1:30,0:29:39.18:112,39,0	0/0:26,0:26:69.17:0,69,754	0/0:25,0:25:54.12:0,54,584	0/0:19,0:19:54.15:0,54,596	0/0:22,0:22:60.14:0,60,650	0/0:26,1:27:52.14:0,52,794	0/0:27,0:27:75.20:0,75,829	0/0:29,0:29:81.22:0,81,896	0/0:18,0:18:42.11:0,42,462	0/0:23,0:26:65.97:0,66,684	1/1:5,21:25:59.98:520,60,0	0/0:27,0:27:69.17:0,69,753	1/1:1,28:29:71.98:625,72,0
chr10	98080582	.	AAAAT	A	1994.15	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.363;DP=673;FS=0.575;HRun=0;HaplotypeScore=115.1764;InbreedingCoeff=0.9906;MQ=66.96;MQ0=2;MQRankSum=-1.089;QD=28.09;ReadPosRankSum=1.282;VQSLOD=3.5510;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,33:40:49.31:1089,49,0	0/0:15,0:15:42.14:0,42,1078	0/0:17,0:11:33.08:0,33,576	0/0:11,0:11:14.51:0,15,331	0/0:37,0:37:99:0,105,2414	0/0:19,0:19:57.18:0,57,1384	0/0:22,0:22:66.23:0,66,1693	0/0:40,0:39:99:0,111,1293	0/0:12,0:12:36.07:0,36,755	0/0:34,0:34:96.18:0,96,2153	0/0:19,0:19:54.17:0,54,1264	0/0:20,0:20:57.20:0,57,1420	0/0:20,0:20:57.18:0,57,1342	0/0:18,0:18:54.14:0,54,1223	0/0:23,0:23:63.18:0,63,1441	1/1:1,30:30:60.21:1027,60,0	0/0:27,0:27:78.27:0,78,1836	0/0:21,0:21:54.18:0,54,1280	0/0:25,0:25:72.17:0,72,1539	0/0:22,0:22:66.21:0,66,1620	0/0:27,0:27:81.23:0,81,1913	0/0:29,0:29:87.27:0,87,2023	0/0:28,0:28:84.27:0,84,2054	0/0:15,0:15:42.14:0,42,1033	0/0:27,0:27:75.18:0,75,1621	0/0:21,0:20:60.19:0,60,744	0/0:24,0:24:69.24:0,69,1760	0/0:29,0:29:75.23:0,75,947
chr10	98081719	.	G	GA	686.01	PASS	AB=0.579;AC=3;AF=0.054;AN=56;BaseQRankSum=-6.779;DP=520;FS=0.720;HRun=10;HaplotypeScore=55.8500;InbreedingCoeff=0.5968;MQ=70.90;MQ0=1;MQRankSum=-0.233;QD=17.15;ReadPosRankSum=1.805;VQSLOD=4.0466;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:32.65:0,33,82	0/0:9,0:9:23.97:0,24,197	0/0:13,0:12:25.54:0,26,178	0/0:7,0:7:5.97:0,6,49	0/0:32,0:32:65.84:0,66,536	0/0:20,0:20:50.91:0,51,419	0/0:15,0:15:32.92:0,33,268	0/0:26,0:26:36.44:0,36,380	0/0:10,0:10:23.95:0,24,197	0/0:18,0:18:38.92:0,39,320	0/0:15,0:15:32.95:0,33,271	0/0:20,0:20:53.89:0,54,440	0/0:17,0:17:47.93:0,48,394	0/0:12,0:12:29.95:0,30,244	0/0:28,0:28:80.91:0,81,665	0/1:6,16:22:19.80:426,0,20	0/0:24,1:26:35.75:0,36,490	1/1:5,12:18:35.92:366,36,0	0/0:17,0:17:41.92:0,42,342	0/0:28,0:29:70.95:0,71,572	0/0:22,0:22:50.93:0,51,419	0/0:11,0:11:26.97:0,27,222	0/0:22,0:22:44.89:0,45,366	0/0:13,0:14:37.99:0,38,301	0/0:20,0:20:50.90:0,51,419	0/0:16,1:17:15.95:0,16,337	0/0:26,0:26:71.87:0,72,585	0/0:8,0:8:23.97:0,24,197
chr10	98081728	.	AAG	A	785.08	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.110;DP=515;FS=4.144;HRun=0;HaplotypeScore=63.0604;InbreedingCoeff=0.8998;MQ=68.48;MQ0=1;MQRankSum=-1.273;QD=31.40;ReadPosRankSum=3.820;VQSLOD=5.6184;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:63.21:880,63,0	0/0:8,0:8:24.08:0,24,414	0/0:12,0:11:22.84:0,23,258	0/0:5,0:5:6.02:0,6,104	0/0:29,0:29:81.17:0,81,1241	0/0:19,0:19:54.18:0,54,930	0/0:16,0:16:45.10:0,45,663	0/0:27,0:27:72.20:0,72,1083	0/0:9,0:9:27.09:0,27,463	0/0:17,0:17:45.11:0,45,715	0/0:16,0:16:48.11:0,48,700	0/0:19,0:19:57.19:0,57,961	0/0:20,0:20:60.16:0,60,951	0/0:12,0:12:36.09:0,36,543	0/0:29,0:29:87.27:0,87,1447	0/0:21,0:21:60.16:0,60,721	0/0:27,0:27:81.07:0,81,1231	0/0:18,0:18:48.05:0,48,527	0/0:21,0:21:60.05:0,60,847	0/0:26,0:26:78.13:0,78,1257	0/0:20,0:20:57.17:0,57,930	0/0:11,0:11:33.09:0,33,512	0/0:18,0:18:51.17:0,51,867	0/0:13,0:13:38.34:0,38,624	0/0:21,0:21:57.18:0,57,953	0/0:18,0:18:54.17:0,54,888	0/0:28,0:28:84.25:0,84,1373	0/0:10,0:10:30.06:0,30,461
chr10	98084048	.	GCGCA	G	723.34	PASS	AB=0.992;AC=5;AF=0.089;AN=56;BaseQRankSum=3.421;DP=615;FS=9.475;HRun=0;HaplotypeScore=115.7124;InbreedingCoeff=0.2928;MQ=65.54;MQ0=10;MQRankSum=1.186;QD=5.83;ReadPosRankSum=-1.051;VQSLOD=1.6921;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:36:99:206,0,167	0/0:10,0:10:26.92:0,27,491	0/1:30,0:14:4.90:5,0,155	0/1:40,0:20:17.58:18,0,161	0/0:20,0:20:50.92:0,51,858	0/0:16,0:16:44.92:0,45,786	0/0:22,0:22:26.13:0,26,921	0/0:20,0:20:53.86:0,54,551	0/0:10,0:10:16.18:0,16,219	0/0:24,0:24:68.88:0,69,1237	0/0:14,0:14:5.06:0,5,607	0/0:21,0:21:41.27:0,41,929	0/0:15,0:15:12.66:0,13,637	0/0:24,0:24:68.77:0,69,1147	0/0:18,0:18:50.20:0,50,900	1/1:11,6:16:45.03:612,45,0	0/0:40,0:39:61.17:0,61,1955	0/0:29,0:29:67.01:0,67,1059	0/0:4,0:4:11.71:0,12,70	0/0:15,0:14:32.93:0,33,566	0/0:53,0:52:7.24:0,7,1854	0/0:14,0:14:38.83:0,39,663	0/0:15,0:15:5.05:0,5,499	0/0:40,0:39:58.02:0,58,1631	0/0:17,0:17:44.94:0,45,785	0/0:21,0:19:38.53:0,39,448	0/0:15,0:15:36.01:0,36,721	0/0:14,0:14:38.88:0,39,392
chr10	98084050	.	GCA	G	569.85	PASS	AB=0.883;AC=20;AF=0.385;AN=52;BaseQRankSum=4.614;DP=618;FS=0.000;HRun=0;HaplotypeScore=94.3595;InbreedingCoeff=-0.3339;MQ=61.83;MQ0=11;MQRankSum=1.456;QD=1.60;ReadPosRankSum=1.808;VQSLOD=1.2484;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:20.08:0,20,166	0/1:8,2:10:15.36:15,0,176	./.	./.	0/1:18,3:21:6.54:7,0,329	0/1:13,4:16:70.85:71,0,287	0/1:20,0:21:14.65:15,0,361	0/0:21,0:23:1.28:0,1,224	0/1:10,1:11:19.49:79,0,19	0/0:23,0:23:30.09:0,30,436	0/1:12,0:13:10.67:11,0,208	0/1:19,2:22:11.69:12,0,385	0/1:13,2:15:15.82:16,0,264	0/0:25,1:26:2.42:0,2,398	0/1:15,2:17:3.53:4,0,378	1/1:16,0:15:20.47:118,20,0	0/1:33,5:39:48.05:48,0,775	0/0:16,0:31:39.49:0,39,383	1/1:3,1:4:3.01:34,3,0	0/0:14,0:13:2.75:0,3,188	0/1:45,1:50:81.03:81,0,678	0/1:14,1:15:3.69:4,0,304	0/1:11,2:13:32.50:33,0,193	0/1:32,6:39:99:100,0,609	0/1:16,0:16:6.23:6,0,330	0/0:21,0:18:24.17:0,24,170	0/1:10,5:15:68.05:68,0,296	0/0:13,0:13:15.02:0,15,163
chr10	98084173	.	TG	T	878.68	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.990;DP=637;FS=2.584;HRun=2;HaplotypeScore=62.1100;InbreedingCoeff=0.9946;MQ=80.40;MQ0=0;MQRankSum=-2.276;QD=29.29;ReadPosRankSum=2.228;VQSLOD=3.3632;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.29:0,87,1303	0/0:19,0:19:54.18:0,54,806	0/0:21,0:22:43.54:0,44,714	0/0:11,0:11:20.39:0,20,216	0/0:43,0:43:99:0,126,1858	0/0:25,0:25:75.25:0,75,1104	0/0:21,0:21:63.20:0,63,916	0/0:26,0:25:75.22:0,75,1067	0/0:21,0:21:63.20:0,63,921	0/0:24,0:24:72.24:0,72,1077	0/0:24,0:24:66.20:0,66,965	0/0:19,0:19:57.19:0,57,852	0/0:18,0:18:54.18:0,54,805	0/0:32,0:32:96.32:0,96,1428	0/0:21,0:21:63.21:0,63,944	0/0:17,0:17:51.16:0,51,745	0/0:30,0:30:84.26:0,84,1217	1/1:1,29:30:75.24:974,75,0	0/0:12,0:12:33.10:0,33,476	0/0:29,0:29:87.29:0,87,1304	0/0:11,0:11:33.11:0,33,490	0/0:17,0:17:48.16:0,48,708	0/0:31,0:31:93.31:0,93,1391	0/0:13,0:13:39.13:0,39,583	0/0:26,0:26:75.25:0,75,1122	0/0:29,0:29:87.29:0,87,1303	0/0:24,0:24:72.24:0,72,1077	0/0:12,0:12:36.12:0,36,534
chr10	98085440	.	T	TA	1472.69	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-1.898;DP=583;FS=2.467;HRun=9;HaplotypeScore=59.0570;InbreedingCoeff=0.8603;MQ=69.78;MQ0=0;MQRankSum=-1.433;QD=19.38;ReadPosRankSum=0.528;VQSLOD=3.9136;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:18:50.97:545,51,0	0/0:9,0:9:23.99:0,24,208	0/0:11,0:11:13.22:0,13,135	0/1:13,0:11:5.54:6,0,75	0/0:29,0:29:62.62:0,63,547	0/0:24,0:24:55.47:0,55,492	0/0:15,0:15:41.99:0,42,365	0/0:33,0:33:89.96:0,90,779	0/0:22,0:22:62.98:0,63,547	0/0:26,0:26:65.97:0,66,571	0/0:32,0:32:80.96:0,81,699	0/0:16,0:16:35.98:0,36,313	0/0:17,0:17:47.96:0,48,412	0/0:20,0:20:47.98:0,48,417	0/0:17,0:17:47.99:0,48,417	0/0:19,0:19:41.98:0,42,365	0/0:21,0:21:50.97:0,51,443	1/1:3,16:19:42.11:465,42,0	0/0:23,1:24:29.80:0,30,487	0/0:31,0:31:74.98:0,75,651	0/0:20,0:20:50.99:0,51,443	0/0:26,0:26:68.96:0,69,599	0/0:24,0:24:62.97:0,63,546	0/0:8,0:8:24:0,24,208	0/0:16,0:16:35.97:0,36,312	1/1:8,18:26:34.12:603,34,0	0/0:35,0:35:92.97:0,93,807	0/0:12,0:12:29.99:0,30,261
chr10	98085750	.	G	GT	4635.71	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-13.098;DP=673;FS=3.268;HRun=4;HaplotypeScore=61.2866;InbreedingCoeff=0.9999;MQ=88.36;MQ0=0;MQRankSum=-4.212;QD=33.84;ReadPosRankSum=0.774;VQSLOD=5.4964;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:43.37:953,43,0	0/0:12,0:12:33.08:0,33,364	0/0:20,0:20:56.96:0,57,609	0/0:28,0:28:49.64:0,50,762	0/0:32,0:32:90.26:0,90,1021	0/0:23,0:23:69.20:0,69,783	0/0:24,0:24:69.18:0,69,772	1/1:2,23:25:69.21:913,69,0	0/0:21,0:21:60.14:0,60,660	0/0:30,0:30:81.23:0,81,919	0/0:26,0:26:78.22:0,78,884	0/0:21,0:21:63.18:0,63,715	0/0:28,0:28:69.19:0,69,783	0/0:30,0:30:87.22:0,87,964	0/0:28,0:28:84.22:0,84,943	1/1:2,21:23:45.15:616,45,0	0/0:18,0:18:48.14:0,48,545	1/1:2,16:18:42.11:554,42,0	0/0:14,0:14:36.05:0,36,384	0/0:35,0:35:99:0,102,1147	0/0:14,0:14:42.09:0,42,456	0/0:32,0:32:93.26:0,93,1055	0/0:23,0:23:69.20:0,69,782	0/0:19,0:19:54.15:0,54,612	0/0:18,0:18:39.11:0,39,442	1/1:1,24:25:69.23:944,69,0	0/0:40,0:40:99:0,111,1259	1/1:2,18:20:48.16:657,48,0
chr10	98086855	.	AAGAC	A	2465.69	PASS	AB=0.509;AC=5;AF=0.089;AN=56;BaseQRankSum=7.337;DP=721;FS=7.403;HRun=0;HaplotypeScore=120.1005;InbreedingCoeff=0.7419;MQ=91.65;MQ0=1;MQRankSum=-5.162;QD=42.51;ReadPosRankSum=-1.885;VQSLOD=3.3316;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,3287	0/0:11,0:11:33.11:0,33,891	0/0:33,0:33:93.32:0,93,2429	0/0:27,0:27:71.91:0,72,1768	0/0:21,0:21:63.22:0,63,1617	0/0:21,0:21:57.20:0,57,1539	0/0:26,0:26:75.26:0,75,2007	1/1:1,21:22:63.20:1161,63,0	0/0:26,0:26:78.27:0,78,2062	0/0:30,0:30:84.29:0,84,2135	0/0:22,0:22:63.22:0,63,1692	0/0:30,0:30:84.26:0,84,2153	0/0:26,0:26:69.24:0,69,1846	0/0:20,0:20:54.19:0,54,1390	0/0:31,0:31:93.32:0,93,2494	0/0:29,0:29:87.28:0,87,2275	0/0:26,0:26:75.26:0,75,1991	0/0:21,0:21:63.22:0,63,1620	0/0:22,0:22:57.20:0,57,1431	0/0:36,0:36:99:0,105,2720	0/0:40,0:40:99:0,117,3114	0/0:29,0:29:84.29:0,84,2161	0/0:19,0:19:51.17:0,51,1341	0/0:31,0:31:93.32:0,93,2499	0/0:20,0:20:60.21:0,60,1619	0/1:1,26:26:5.81:1207,0,6	0/0:24,0:23:69.24:0,69,1827	1/1:2,7:9:2.65:216,3,0
chr10	98088340	.	A	AAT	1764.27	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.731;DP=643;FS=4.700;HRun=0;HaplotypeScore=87.4478;InbreedingCoeff=0.9965;MQ=64.07;MQ0=2;MQRankSum=-5.163;QD=36.01;ReadPosRankSum=1.175;VQSLOD=6.0284;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,22:31:66.09:1007,66,0	0/0:8,0:8:21.07:0,21,292	0/0:14,0:12:25.99:0,26,353	0/0:16,0:12:26.88:0,27,316	0/0:32,0:32:96.26:0,96,1265	0/0:27,0:27:78.19:0,78,984	0/0:26,0:26:72.17:0,72,916	0/0:22,0:22:57.11:0,57,636	0/0:15,0:15:36.09:0,36,467	0/0:29,0:29:87.27:0,87,1156	0/0:24,0:24:69.12:0,69,886	0/0:25,0:25:69.13:0,69,840	0/0:23,0:23:69.21:0,69,942	0/0:26,0:26:75.19:0,75,963	0/0:33,0:33:81.28:0,81,1174	1/1:3,15:18:51.16:879,51,0	0/0:25,0:24:68.95:0,69,783	0/0:32,0:32:45.92:0,46,394	0/0:21,0:21:57.11:0,57,694	0/0:23,0:23:69.17:0,69,888	0/0:16,0:16:48.13:0,48,632	0/0:23,0:23:69.15:0,69,902	0/0:27,0:27:78.18:0,78,997	0/0:19,0:19:51.10:0,51,653	0/0:20,0:20:54.16:0,54,719	0/0:27,0:27:75.24:0,75,1030	0/0:29,0:27:72.18:0,72,919	0/0:12,0:12:36.04:0,36,458
chr10	98088360	.	CGT	C	1363.73	PASS	AB=0.917;AC=6;AF=0.107;AN=56;BaseQRankSum=9.968;DP=680;FS=0.535;HRun=0;HaplotypeScore=92.1321;InbreedingCoeff=0.6125;MQ=59.73;MQ0=4;MQRankSum=-2.727;QD=13.92;ReadPosRankSum=-1.069;VQSLOD=3.3899;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,21:32:60.13:697,60,0	0/0:9,0:9:21.07:0,21,344	0/0:17,0:12:23.91:0,24,323	0/0:25,0:20:40.95:0,41,621	0/0:30,2:32:3.87:0,4,1074	0/1:20,3:23:51.37:51,0,772	0/0:28,0:29:43.94:0,44,1046	0/0:16,0:16:36.59:0,37,582	0/0:13,0:13:36.12:0,36,579	0/0:29,0:29:75.25:0,75,1187	0/0:29,0:29:40.51:0,41,1095	0/0:22,0:22:66.21:0,66,1054	0/0:27,0:27:75.23:0,75,1194	0/0:26,1:27:32.03:0,32,960	0/0:37,0:37:99:0,102,1589	1/1:3,21:24:60.19:743,60,0	0/0:20,1:21:23.02:0,23,897	0/0:35,0:35:87.28:0,87,1394	0/1:18,1:19:4.13:4,0,388	0/0:28,0:28:56.32:0,56,1145	0/0:21,0:21:51.16:0,51,808	0/0:26,1:27:35.03:0,35,1063	0/0:24,1:25:29.03:0,29,922	0/0:15,0:15:36.11:0,36,565	0/0:19,2:21:10.91:0,11,700	0/0:33,0:33:87.28:0,87,1382	0/0:32,0:28:78.22:0,78,1248	0/0:10,0:10:27.09:0,27,443
chr10	98088848	.	AC	A	1466.92	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=10.459;DP=830;FS=0.000;HRun=1;HaplotypeScore=81.8029;InbreedingCoeff=0.9919;MQ=89.39;MQ0=0;MQRankSum=-1.770;QD=31.89;ReadPosRankSum=1.402;VQSLOD=3.3447;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,159,2455	0/0:12,0:12:36.09:0,36,528	0/0:25,0:25:71.72:0,72,1024	0/0:36,0:36:99:0,102,1482	0/0:26,0:26:78.27:0,78,1246	0/0:19,0:19:57.19:0,57,906	0/0:36,0:36:99:0,108,1694	0/0:28,0:28:84.26:0,84,1280	0/0:30,0:30:90.31:0,90,1428	0/0:28,0:28:81.27:0,81,1276	0/0:24,0:24:72.23:0,72,1125	0/0:36,0:36:99:0,108,1675	0/0:38,0:38:99:0,114,1790	0/0:30,0:30:90.25:0,90,1362	0/0:46,0:46:99:0,135,2158	1/1:1,45:46:99:1562,126,0	0/0:40,0:40:99:0,117,1867	0/0:16,0:16:48.14:0,48,737	0/0:29,0:29:87.29:0,87,1369	0/0:19,0:19:57.19:0,57,906	0/0:33,0:33:99:0,99,1567	0/0:32,0:32:96.32:0,96,1506	0/0:32,0:32:90.15:0,90,1434	0/0:32,0:32:96.29:0,96,1486	0/0:29,0:29:87.21:0,87,1332	0/0:24,0:24:72.25:0,72,1151	0/0:25,0:24:75.26:0,75,1193	0/0:6,0:6:18.06:0,18,288
chr10	98089015	.	C	CTG	2346.95	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.761;DP=687;FS=5.626;HRun=0;HaplotypeScore=79.7473;InbreedingCoeff=0.9960;MQ=81.03;MQ0=0;MQRankSum=-0.842;QD=46.94;ReadPosRankSum=1.314;VQSLOD=5.0170;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1795	0/0:13,0:13:39.13:0,39,597	0/0:17,0:17:18.46:0,18,424	0/0:21,0:21:50.84:0,51,642	0/0:31,0:31:90.29:0,90,1357	0/0:26,0:26:75.23:0,75,1088	0/0:20,0:20:57.18:0,57,850	0/0:23,0:23:66.18:0,66,917	0/0:25,0:25:72.22:0,72,1061	0/0:23,0:22:69.21:0,69,993	0/0:22,0:22:66.19:0,66,973	0/0:21,0:21:57.18:0,57,851	0/0:29,0:29:87.26:0,87,1305	0/0:22,0:22:57.18:0,57,834	0/0:37,0:37:99:0,111,1696	1/1:1,31:32:81.28:1550,81,0	0/0:26,0:26:75.23:0,75,1103	1/1:0,18:18:48.16:918,48,0	0/0:27,0:27:78.24:0,78,1134	0/0:34,0:34:96.27:0,96,1421	0/0:12,0:12:33.10:0,33,482	0/0:33,0:33:93.30:0,93,1401	0/0:28,0:28:81.26:0,81,1216	0/0:22,0:22:63.20:0,63,943	0/0:33,0:33:96.30:0,96,1429	0/0:18,0:18:54.18:0,54,808	0/0:22,0:22:60.17:0,60,873	0/0:12,0:12:36.11:0,36,530
chr10	98089878	.	G	GA	4031.44	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-11.038;DP=852;FS=5.127;HRun=0;HaplotypeScore=79.9687;InbreedingCoeff=0.9977;MQ=83.26;MQ0=0;MQRankSum=-2.398;QD=45.81;ReadPosRankSum=-2.690;VQSLOD=2.6104;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,113,1517	0/0:12,0:12:36.12:0,36,503	0/0:25,0:24:58.18:0,58,770	0/0:27,0:27:47.96:0,48,988	0/0:37,0:37:99:0,108,1474	0/0:38,0:38:99:0,114,1594	0/0:21,0:21:63.20:0,63,865	1/1:1,29:30:84.28:1320,84,0	0/0:38,0:38:99:0,111,1536	0/0:33,0:33:96.32:0,96,1341	0/0:27,0:27:81.24:0,81,1083	0/0:43,0:43:99:0,129,1787	0/0:34,0:34:99:0,102,1356	0/0:39,0:39:99:0,117,1613	0/0:38,0:38:99:0,114,1545	0/0:53,0:53:99:0,160,2208	0/0:26,0:26:75.17:0,75,977	1/1:0,17:17:51.17:815,51,0	0/0:24,0:24:69.23:0,69,964	0/0:30,0:30:90.29:0,90,1241	0/0:35,0:35:99:0,99,1385	0/0:24,0:24:69.22:0,69,947	0/0:25,0:25:75.25:0,75,1048	0/0:28,0:28:84.27:0,84,1158	0/0:29,0:29:87.28:0,87,1200	1/1:0,35:35:99:1610,102,0	0/0:40,0:40:99:0,117,1618	1/1:0,6:6:18.06:287,18,0
chr10	98091058	.	A	AT	576.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.269;DP=595;FS=13.416;HRun=5;HaplotypeScore=53.7036;InbreedingCoeff=0.9892;MQ=75.29;MQ0=0;MQRankSum=-0.804;QD=30.33;ReadPosRankSum=-0.199;VQSLOD=2.8459;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:48.09:0,48,506	0/0:11,0:11:30.07:0,30,322	0/0:12,0:12:33:0,33,323	0/0:12,0:12:17.83:0,18,190	0/0:35,0:35:90.21:0,90,959	0/0:31,0:31:93.21:0,93,988	0/0:12,0:12:36.09:0,36,387	0/0:17,0:17:48.11:0,48,510	0/0:25,0:24:69.14:0,69,725	0/0:25,0:25:75.19:0,75,806	0/0:23,0:23:60.14:0,60,638	0/0:23,0:23:63.16:0,63,677	0/0:22,0:22:60.15:0,60,645	0/0:17,0:17:42.10:0,42,451	0/0:25,0:25:72.15:0,72,757	0/0:25,0:25:57.14:0,57,612	0/0:16,0:16:42.08:0,42,442	1/1:1,18:19:51.17:671,51,0	0/0:11,0:11:27.07:0,27,290	0/0:38,0:38:99:0,99,1047	0/0:10,0:10:30.08:0,30,322	0/0:23,0:23:69.16:0,69,733	0/0:25,0:25:72.17:0,72,766	0/0:20,0:20:54.13:0,54,580	0/0:31,0:31:93.19:0,93,981	0/0:28,0:28:78.19:0,78,832	0/0:21,0:20:51.12:0,51,548	0/0:17,0:17:48.05:0,48,516
chr10	98093309	.	TG	T	786.29	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.361;DP=669;FS=0.825;HRun=1;HaplotypeScore=66.7650;InbreedingCoeff=0.9896;MQ=84.31;MQ0=0;MQRankSum=-2.157;QD=37.44;ReadPosRankSum=0.775;VQSLOD=4.0638;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1684	0/0:8,0:8:24.05:0,24,358	0/0:19,0:19:55.40:0,55,803	0/0:26,0:26:60.19:0,60,923	0/0:21,0:21:63.21:0,63,1003	0/0:19,0:19:57.19:0,57,908	0/0:33,0:33:99:0,99,1558	0/0:32,0:32:96.26:0,96,1504	0/0:24,0:24:72.21:0,72,1104	0/0:26,0:26:78.27:0,78,1245	0/0:14,0:14:39.13:0,39,622	0/0:31,0:31:90.29:0,90,1416	0/0:29,0:29:84.26:0,84,1316	0/0:24,0:24:69.24:0,69,1101	0/0:27,0:26:81.26:0,81,1272	0/0:23,0:23:69.24:0,69,1098	0/0:12,0:12:36.08:0,36,525	1/1:0,21:21:63.21:881,63,0	0/0:28,0:28:81.27:0,81,1275	0/0:14,0:14:42.13:0,42,648	0/0:54,0:54:99:0,163,2560	0/0:20,0:20:60.19:0,60,931	0/0:13,0:13:33.11:0,33,528	0/0:42,0:42:99:0,123,1936	0/0:22,0:22:66.23:0,66,1055	0/0:26,0:26:78.27:0,78,1246	0/0:19,0:19:57.19:0,57,911	0/0:6,0:6:18.06:0,18,288
chr10	98093615	.	G	GT	1366.83	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.583;DP=648;FS=0.000;HRun=8;HaplotypeScore=62.8424;InbreedingCoeff=0.9934;MQ=77.54;MQ0=0;MQRankSum=-2.016;QD=25.31;ReadPosRankSum=0.659;VQSLOD=4.2607;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:70.41:0,70,797	0/0:18,0:18:44.52:0,45,411	0/0:18,0:18:36:0,36,327	0/0:11,0:11:20.98:0,21,183	0/0:29,0:29:83.93:0,84,749	0/0:21,0:21:51.02:0,51,463	0/0:16,0:16:42:0,42,379	0/0:30,0:30:81.03:0,81,739	0/0:20,0:20:56.99:0,57,518	0/0:34,0:34:90.91:0,91,821	0/0:21,0:21:57.02:0,57,519	0/0:29,0:29:74.28:0,74,674	0/0:26,0:26:65.93:0,66,592	0/0:28,0:28:75.01:0,75,676	0/0:18,0:18:39:0,39,352	1/1:1,23:24:60.18:692,60,0	0/0:12,0:12:33:0,33,297	1/1:3,27:29:69.20:796,69,0	0/0:23,1:24:19.36:0,19,419	0/0:20,0:20:53.95:0,54,476	0/0:15,0:15:35.98:0,36,318	0/0:26,0:26:77.85:0,78,687	0/0:15,0:15:39.02:0,39,357	0/0:24,0:24:59.99:0,60,538	0/0:32,0:32:87.04:0,87,796	0/0:40,0:40:99:0,117,1068	0/0:26,0:26:78.03:0,78,706	0/0:8,0:8:24.01:0,24,220
chr10	98095712	.	GA	G	37.26	PASS	AC=4;AF=1.00;AN=4;DP=12;FS=0.000;HRun=1;HaplotypeScore=6.3478;MQ=75.26;MQ0=1;QD=12.42;VQSLOD=1.5772;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:42,3,0	./.	1/1:1,1:2:5.99:59,6,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	98095795	.	A	AT	5550	PASS	AC=54;AF=1.000;AN=54;DP=195;FS=0.000;HRun=0;HaplotypeScore=96.6515;InbreedingCoeff=-0.0349;MQ=40.45;MQ0=4;QD=28.61;VQSLOD=4.9393;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:4:12.04:141,12,0	1/1:0,6:6:18.05:197,18,0	1/1:6,1:3:3:31,3,0	./.	1/1:0,12:12:35.91:363,36,0	1/1:1,6:6:18.05:197,18,0	1/1:0,4:4:12.03:131,12,0	1/1:2,6:8:21.06:242,21,0	1/1:0,6:6:15.04:164,15,0	1/1:0,9:9:27.07:298,27,0	1/1:0,11:11:32.98:344,33,0	1/1:0,9:9:24.07:262,24,0	1/1:0,11:11:33.09:359,33,0	1/1:0,5:4:9.02:98,9,0	1/1:0,3:3:9.02:98,9,0	1/1:0,8:8:21.06:248,21,0	1/1:0,4:3:9.02:99,9,0	1/1:0,1:1:3.01:36,3,0	1/1:3,4:4:12.03:134,12,0	1/1:0,11:11:27.07:297,27,0	1/1:0,1:1:3.01:33,3,0	1/1:0,11:11:33.09:359,33,0	1/1:1,4:4:12.03:131,12,0	1/1:0,3:3:6.02:67,6,0	1/1:0,9:9:27.07:298,27,0	1/1:2,12:14:33.03:366,33,0	1/1:0,11:11:33.09:364,33,0	1/1:2,5:7:17.99:195,18,0
chr10	98095820	.	C	CA	8441.95	PASS	AB=1.000;AC=49;AF=0.942;AN=52;BaseQRankSum=0.016;DP=283;FS=36.462;HRun=6;HaplotypeScore=146.5892;InbreedingCoeff=0.6365;MQ=39.93;MQ0=0;MQRankSum=-2.439;QD=30.81;ReadPosRankSum=1.355;VQSLOD=2.0042;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,5:7:12.04:149,12,0	1/1:1,7:8:24.08:299,24,0	0/0:7,0:4:4.23:0,4,15	./.	1/1:2,14:16:36.11:450,36,0	1/1:0,9:9:27.09:339,27,0	1/1:1,2:3:6.02:75,6,0	1/1:5,7:12:24.08:296,24,0	1/1:0,7:7:18.06:224,18,0	1/1:3,10:13:36.08:433,36,0	1/1:2,15:17:39.12:485,39,0	1/1:1,12:13:30.10:377,30,0	1/1:3,9:12:30.04:358,30,0	1/1:1,12:11:30.10:377,30,0	1/1:0,10:10:30.10:377,30,0	1/1:1,13:14:39.12:475,39,0	1/1:1,4:5:12:133,12,0	0/1:2,0:2:0:0,0,0	1/1:5,7:12:24.08:302,24,0	1/1:0,13:13:36.11:450,36,0	./.	1/1:2,15:17:45.14:563,45,0	1/1:0,10:10:23.29:271,23,0	1/1:1,5:6:9.03:113,9,0	1/1:0,14:14:39.12:490,39,0	1/1:5,12:17:45.14:549,45,0	1/1:3,11:14:42.09:486,42,0	1/1:0,10:10:30.09:372,30,0
chr10	98096301	.	T	TC	2991.40	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-3.568;DP=563;FS=35.600;HRun=2;HaplotypeScore=56.3049;InbreedingCoeff=0.9786;MQ=61.20;MQ0=0;MQRankSum=-2.303;QD=36.04;ReadPosRankSum=-1.218;VQSLOD=0.9682;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,1252	0/0:11,0:11:30.09:0,30,372	0/0:14,0:13:14.50:0,15,303	0/0:28,0:28:72.22:0,72,872	0/0:24,0:24:63.20:0,63,780	0/0:19,0:17:57.12:0,57,677	0/0:17,0:17:48.14:0,48,582	1/1:1,19:20:57.16:783,57,0	0/0:20,0:20:57.18:0,57,706	0/0:14,0:14:36.11:0,36,446	0/0:23,0:23:69.20:0,69,841	0/0:16,0:16:48.15:0,48,594	0/0:16,0:16:45.14:0,45,557	0/0:21,0:21:63.20:0,63,781	0/0:22,0:22:66.21:0,66,816	1/1:2,16:18:7.97:567,8,0	0/0:22,0:22:66.19:0,66,803	1/1:1,20:21:57.19:820,57,0	0/0:20,0:20:57.15:0,57,690	0/0:21,0:21:51.16:0,51,632	0/0:15,0:15:45.10:0,45,527	0/0:22,0:22:63.18:0,63,767	0/0:18,0:18:45.13:0,45,546	0/0:19,0:19:57.18:0,57,706	0/0:34,0:34:99:0,99,1214	1/1:0,14:14:39.13:560,39,0	0/0:26,0:26:78.24:0,78,954	1/1:0,10:10:30.10:432,30,0
chr10	98098783	.	GAAC	G	1154.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.585;DP=685;FS=1.716;HRun=0;HaplotypeScore=93.9001;InbreedingCoeff=0.9453;MQ=79.07;MQ0=0;MQRankSum=-3.157;QD=48.12;ReadPosRankSum=1.161;VQSLOD=5.5795;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,2488	0/0:18,0:18:54.19:0,54,1323	0/0:20,0:20:60.21:0,60,1356	0/0:20,0:18:44.65:0,45,935	0/0:26,0:26:78.27:0,78,1867	0/0:24,0:24:72.23:0,72,1677	0/0:26,0:26:78.27:0,78,1898	0/0:29,0:29:84.29:0,84,2040	0/0:24,0:24:69.24:0,69,1627	0/0:27,0:27:78.27:0,78,1904	0/0:21,0:21:60.21:0,60,1479	0/0:30,0:30:90.27:0,90,2155	0/0:23,0:23:69.24:0,69,1701	0/0:30,0:30:90.31:0,90,2182	0/0:27,0:27:81.28:0,81,1988	1/1:0,24:24:69.19:1250,69,0	0/0:24,0:24:69.24:0,69,1659	0/0:24,0:24:72.25:0,72,1764	0/0:32,0:32:96.33:0,96,2317	0/0:26,0:26:78.27:0,78,1883	0/0:30,0:30:90.31:0,90,2184	0/0:25,0:25:75.26:0,75,1823	0/0:15,0:15:42.14:0,42,997	0/0:20,0:20:60.21:0,60,1479	0/0:21,0:21:63.21:0,63,1505	0/0:29,0:29:87.30:0,87,2126	0/0:32,0:32:96.30:0,96,2243	0/0:3,0:3:9.03:0,9,222
chr10	98100498	.	G	GT	283.49	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.951;DP=413;FS=0.000;HRun=6;HaplotypeScore=42.4125;InbreedingCoeff=0.6134;MQ=71.13;MQ0=0;MQRankSum=0.785;QD=25.77;ReadPosRankSum=-0.078;VQSLOD=2.9550;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:24.05:0,24,244	0/0:7,0:7:18.04:0,18,184	0/0:12,0:10:5.88:0,6,154	0/0:7,0:7:3.89:0,4,32	0/0:28,0:28:72.16:0,72,734	0/0:12,0:12:33.07:0,33,337	0/0:9,0:9:24.02:0,24,230	0/0:30,0:30:84.18:0,84,852	0/0:7,0:7:18.03:0,18,177	0/0:23,0:23:63.14:0,63,643	0/0:24,0:24:64.38:0,64,670	0/0:9,0:9:24.05:0,24,245	0/0:17,0:17:48.11:0,48,490	0/0:12,0:12:36.08:0,36,367	0/0:11,0:11:30.06:0,30,306	1/1:1,10:11:30.10:377,30,0	0/0:21,0:21:50.09:0,50,477	0/0:23,0:23:63.12:0,63,634	0/0:25,0:25:69.14:0,69,694	0/0:20,0:20:57.13:0,57,581	0/0:4,0:4:3.01:0,3,31	0/0:3,0:3:6.01:0,6,61	0/0:6,0:6:12.02:0,12,122	0/0:6,0:6:18.04:0,18,184	0/0:11,0:11:33.07:0,33,336	0/0:27,0:27:69.15:0,69,704	0/0:21,0:21:54.10:0,54,543	0/0:16,0:16:42.09:0,42,428
chr10	98100602	.	ATT	A	904.02	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.867;DP=450;FS=9.526;HRun=8;HaplotypeScore=53.4053;InbreedingCoeff=0.9580;MQ=71.32;MQ0=0;MQRankSum=0.763;QD=28.25;ReadPosRankSum=-0.422;VQSLOD=2.3571;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:15.05:0,15,242	0/0:11,0:11:33.10:0,33,534	0/0:10,0:10:24.07:0,24,351	0/0:4,0:4:9.03:0,9,140	0/0:26,0:26:75.26:0,75,1267	0/0:23,0:22:69.24:0,69,1167	0/0:12,0:12:27.08:0,27,433	1/1:4,21:25:63.19:768,63,0	0/0:15,0:15:42.14:0,42,710	0/0:22,0:22:60.21:0,60,1015	0/0:10,0:10:27.09:0,27,457	0/0:13,0:13:36.12:0,36,598	0/0:15,0:15:45.15:0,45,761	0/0:15,0:15:39.13:0,39,659	0/0:20,0:19:48.13:0,48,782	0/0:16,0:16:48.16:0,48,789	0/0:17,0:17:48.15:0,48,773	0/0:17,0:17:48.15:0,48,779	0/0:14,0:14:42.14:0,42,710	0/0:26,0:26:72.25:0,72,1214	0/0:13,0:13:36.11:0,36,585	0/0:10,0:10:27.09:0,27,451	0/0:20,0:20:57.17:0,57,885	0/0:10,0:10:30.10:0,30,507	0/0:12,0:13:38.58:0,39,587	0/0:31,0:31:81.28:0,81,1370	0/0:30,0:29:84.25:0,84,1367	1/1:0,7:7:21.07:256,21,0
chr10	98101180	.	TAA	T	778.22	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.220;DP=664;FS=6.241;HRun=3;HaplotypeScore=77.6893;InbreedingCoeff=0.9994;MQ=90.45;MQ0=0;MQRankSum=-1.930;QD=38.91;ReadPosRankSum=1.700;VQSLOD=3.0455;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1970	0/0:10,0:10:30.10:0,30,580	0/0:28,0:28:81.26:0,81,1460	0/0:23,0:23:66.23:0,66,1219	0/0:30,0:30:90.31:0,90,1738	0/0:22,0:22:66.23:0,66,1269	0/0:16,0:16:45.15:0,45,853	0/0:25,0:25:75.25:0,75,1414	0/0:22,0:22:66.23:0,66,1275	0/0:29,0:29:87.30:0,87,1682	0/0:19,0:19:57.17:0,57,1007	0/0:27,0:27:81.28:0,81,1558	0/0:25,0:25:75.26:0,75,1449	0/0:32,0:32:96.33:0,96,1850	0/0:25,0:25:75.25:0,75,1419	1/1:0,20:20:57.19:873,57,0	0/0:24,0:24:72.23:0,72,1346	0/0:18,0:18:54.19:0,54,1043	0/0:19,0:19:54.19:0,54,1042	0/0:26,0:26:75.26:0,75,1449	0/0:34,0:34:99:0,102,1951	0/0:22,0:22:66.18:0,66,1237	0/0:19,0:19:57.20:0,57,1101	0/0:22,0:22:63.22:0,63,1217	0/0:22,0:21:66.22:0,66,1245	0/0:24,0:24:72.25:0,72,1391	0/0:33,0:33:99:0,99,1910	0/0:13,0:13:39.13:0,39,753
chr10	98103966	.	A	AC	671.28	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.936;DP=652;FS=2.907;HRun=5;HaplotypeScore=79.3131;InbreedingCoeff=0.9958;MQ=87.73;MQ0=0;MQRankSum=-0.687;QD=29.19;ReadPosRankSum=3.726;VQSLOD=4.1865;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:99:0,129,1339	0/0:11,0:11:30.04:0,30,305	0/0:32,0:32:90.03:0,90,901	0/0:23,0:23:52.78:0,53,517	0/0:28,0:28:72.10:0,72,743	0/0:17,0:17:38.95:0,39,379	0/0:31,0:31:84.15:0,84,870	0/0:28,0:28:66.16:0,66,709	0/0:10,0:10:27.07:0,27,289	0/0:25,0:25:60.13:0,60,627	0/0:24,0:24:57.07:0,57,595	0/0:24,0:24:69.14:0,69,720	0/0:16,0:16:45.11:0,45,483	0/0:19,0:19:57.14:0,57,612	0/0:20,0:20:57.14:0,57,606	1/1:3,20:23:39.86:766,40,0	0/0:36,0:36:90.21:0,90,958	0/0:17,0:17:51.10:0,51,538	0/0:22,0:22:57.14:0,57,611	0/0:18,0:18:48.09:0,48,500	0/0:30,0:30:84.17:0,84,884	0/0:12,0:12:30.07:0,30,316	0/0:25,0:25:69.17:0,69,740	0/0:29,0:29:87.18:0,87,915	0/0:26,0:26:69.17:0,69,741	0/0:24,0:24:63.82:0,64,646	0/0:30,0:30:75.19:0,75,870	0/0:8,0:8:24.06:0,24,258
chr10	98104248	.	GA	G	1413.72	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.097;DP=401;FS=2.814;HRun=9;HaplotypeScore=42.3110;InbreedingCoeff=0.9453;MQ=77.97;MQ0=1;MQRankSum=-2.984;QD=19.10;ReadPosRankSum=1.346;VQSLOD=3.6070;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,20:27:37.97:426,38,0	0/0:3,0:3:9.03:0,9,104	0/0:18,0:15:31.72:0,32,291	0/0:18,0:12:23.22:0,23,235	0/0:19,0:19:48.14:0,48,553	0/0:12,0:12:36.11:0,36,416	0/0:11,0:11:27.08:0,27,312	0/0:18,0:18:7:0,7,142	0/0:11,0:11:24.07:0,24,277	0/0:6,0:6:15.04:0,15,165	0/0:12,0:12:36.10:0,36,407	0/0:19,0:19:51.14:0,51,579	0/0:18,0:18:45.13:0,45,519	0/0:16,0:16:45.12:0,45,511	0/0:13,0:13:36.11:0,36,415	1/1:0,12:12:33.02:302,33,0	0/0:28,0:28:84.25:0,84,969	1/1:1,15:16:42.02:384,42,0	0/0:15,0:15:33.09:0,33,373	0/0:10,0:10:30.09:0,30,345	0/0:10,0:10:27.08:0,27,312	0/0:5,0:5:12.04:0,12,138	0/0:13,0:13:30.08:0,30,337	0/0:12,0:12:30.09:0,30,346	0/0:19,0:19:51.14:0,51,580	1/1:2,17:19:51.01:461,51,0	0/0:13,0:13:30.09:0,30,346	0/0:8,0:8:23.43:0,23,139
chr10	98104393	.	AAT	A	900.13	PASS	AB=0.887;AC=12;AF=0.286;AN=42;BaseQRankSum=4.729;DP=188;FS=4.008;HRun=0;HaplotypeScore=31.1206;InbreedingCoeff=0.1559;MQ=71.66;MQ0=2;MQRankSum=-1.025;QD=8.82;ReadPosRankSum=1.980;VQSLOD=2.2596;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:5:0:0,0,0	./.	0/0:7,0:5:2.79:0,3,9	0/0:18,0:5:0:0,0,0	0/0:5,0:5:3.01:0,3,47	0/1:5,1:6:22.81:23,0,106	./.	0/1:26,2:29:44.53:45,0,568	0/1:2,1:3:28.34:28,0,41	0/0:5,0:5:3.01:0,3,47	0/0:5,0:5:6.02:0,6,94	./.	0/0:7,0:7:1.17:0,1,85	0/0:2,0:2:6.02:0,6,92	0/0:4,0:4:9.03:0,9,141	0/0:7,0:7:2.99:0,3,23	1/1:7,18:25:45.13:522,45,0	1/1:4,0:9:17.21:105,17,0	0/1:5,2:7:54.49:54,0,99	0/0:2,0:2:3.01:0,3,47	./.	./.	./.	./.	0/0:6,0:6:9.03:0,9,141	0/1:7,0:7:10.25:53,0,10	0/0:10,0:9:16.59:0,17,212	1/1:1,8:11:20.73:202,21,0
chr10	98104415	.	TATATAAAG	T	57.62	PASS	AB=1.000;AC=3;AF=0.058;AN=52;BaseQRankSum=2.830;DP=186;FS=7.975;HRun=0;HaplotypeScore=50.5412;InbreedingCoeff=0.1597;MQ=69.62;MQ0=2;MQRankSum=-2.722;QD=3.20;ReadPosRankSum=1.119;VQSLOD=-0.3233;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:3.01:56,3,0	./.	0/0:8,0:7:11.03:0,11,150	0/0:13,0:1:3.01:0,3,52	0/0:2,0:2:6.02:0,6,162	0/0:7,0:7:18.06:0,18,501	0/0:1,0:1:3.01:0,3,52	0/0:28,0:28:80.44:0,80,2320	0/0:3,0:3:9.03:0,9,248	0/0:4,0:4:12.04:0,12,304	0/0:5,0:5:15.05:0,15,430	0/0:1,0:1:3.01:0,3,52	0/0:5,0:5:15.05:0,15,470	0/0:4,0:4:12.04:0,12,371	0/0:5,0:5:15.05:0,15,537	0/0:3,0:3:3.01:0,3,96	0/0:24,0:24:63.22:0,63,1586	0/0:11,0:11:30.08:0,30,413	0/0:8,0:8:24.08:0,24,635	0/0:1,0:1:3.01:0,3,136	0/0:3,0:3:9.03:0,9,178	./.	0/0:3,0:3:9.03:0,9,214	0/0:2,0:2:6.02:0,6,102	0/0:6,0:6:16.29:0,16,488	0/1:6,0:6:33.37:92,0,33	0/0:11,0:10:30.10:0,30,855	0/0:10,0:10:20.66:0,21,416
chr10	98104680	.	TGCCTAGTGAGCGCAA	T	2098.41	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.130;DP=491;FS=24.172;HRun=0;HaplotypeScore=200.4910;InbreedingCoeff=0.8647;MQ=52.69;MQ0=11;MQRankSum=-5.386;QD=74.94;ReadPosRankSum=-1.481;VQSLOD=1.7905;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:75.26:0,75,4708	0/0:3,0:3:9.03:0,9,681	0/0:8,0:4:9.02:0,9,104	0/0:13,0:4:6.01:0,6,161	0/0:9,0:9:27.09:0,27,1766	0/0:19,0:19:57.20:0,57,4072	0/0:26,0:23:66.70:0,67,4197	1/1:6,19:24:47.20:1805,47,0	0/0:15,0:15:45.15:0,45,3306	0/0:18,0:18:51.18:0,51,3313	0/0:11,0:11:33.11:0,33,2344	0/0:27,0:27:81.28:0,81,5552	0/0:19,0:19:57.20:0,57,3866	0/0:15,0:15:45.15:0,45,2996	0/0:21,0:21:60.21:0,60,4038	0/0:19,0:19:57.11:0,57,2974	0/0:25,0:25:75.20:0,75,4841	0/0:22,0:22:66.23:0,66,4820	0/0:21,0:21:60.20:0,60,3391	0/0:9,0:9:27.09:0,27,1950	0/0:22,0:22:63.22:0,63,4060	0/0:13,0:13:36.11:0,36,2159	0/0:17,0:17:48.16:0,48,3266	0/0:24,0:24:69.24:0,69,5081	0/0:13,0:13:36.12:0,36,2590	0/0:20,0:17:51.13:0,51,2689	0/0:21,0:21:60.21:0,60,4352	1/1:0,3:3:9.03:408,9,0
chr10	98104721	.	GA	G	477.76	PASS	AB=0.906;AC=7;AF=0.125;AN=56;BaseQRankSum=8.824;DP=519;FS=9.338;HRun=11;HaplotypeScore=76.9673;InbreedingCoeff=0.8014;MQ=54.26;MQ0=10;MQRankSum=-6.446;QD=5.25;ReadPosRankSum=2.062;VQSLOD=1.0889;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,11:23:29.42:189,29,0	0/0:6,0:6:18.03:0,18,184	0/0:9,0:2:2.04:0,2,6	0/0:8,0:6:14.97:0,15,139	0/0:14,0:14:36.06:0,36,364	0/0:18,1:21:25.47:0,25,494	0/1:26,3:25:4.16:4,0,370	0/0:21,0:34:69.16:0,69,397	0/0:12,0:12:24.02:0,24,243	0/0:23,0:24:62.99:0,63,649	0/0:14,1:15:20.44:0,20,403	0/0:16,3:19:36.04:0,36,370	0/0:18,0:18:39.06:0,39,403	0/0:12,0:12:27.06:0,27,281	0/0:22,0:22:42.10:0,42,441	1/1:8,8:15:18.98:138,19,0	0/0:24,1:25:38.25:0,38,595	0/0:26,2:28:22.89:0,23,652	0/0:16,1:17:15.16:0,15,354	0/0:14,0:13:32.57:0,33,328	0/0:14,0:14:36.09:0,36,384	0/0:14,1:15:17.29:0,17,373	0/0:16,1:17:9.68:0,10,290	0/0:20,2:22:51.13:0,51,543	0/0:17,0:18:28.44:0,28,443	1/1:6,16:19:44.40:290,44,0	0/0:23,1:29:53.13:0,53,718	0/0:4,0:11:23:0,23,127
chr10	98104726	.	AAAAAAAGAAAG	A	2826.63	PASS	AB=0.703;AC=5;AF=0.089;AN=56;BaseQRankSum=9.367;DP=531;FS=8.677;HRun=0;HaplotypeScore=164.4510;InbreedingCoeff=0.8152;MQ=55.96;MQ0=10;MQRankSum=-8.166;QD=44.87;ReadPosRankSum=1.802;VQSLOD=2.5664;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,11:25:5.74:803,0,6	0/0:7,0:7:21.05:0,21,898	0/0:11,0:4:12.04:0,12,380	0/0:15,0:9:21:0,21,888	0/0:16,0:16:42.11:0,42,2041	0/0:25,0:25:72.19:0,72,3112	0/0:23,0:19:47.96:0,48,2227	0/0:32,0:31:75.17:0,75,3244	0/0:10,0:10:24.04:0,24,984	0/0:27,0:27:78.26:0,78,3812	0/0:15,0:15:39.06:0,39,1868	0/0:19,0:19:42.03:0,42,1781	0/0:20,0:20:60.19:0,60,2672	0/0:13,0:13:36.08:0,36,1535	0/0:19,0:19:42.03:0,42,1840	1/1:13,0:12:26.58:733,27,0	0/0:23,0:23:69.24:0,69,3123	0/0:28,0:28:81.21:0,81,3333	0/0:21,0:21:57.17:0,57,2610	0/0:13,0:12:35.91:0,36,1544	0/0:17,0:17:45.60:0,46,1763	0/0:18,0:17:51.13:0,51,2347	0/0:17,0:17:36.88:0,37,1824	0/0:19,0:19:54.18:0,54,2473	0/0:19,0:19:51.62:0,52,2492	1/1:24,0:21:57.10:1419,57,0	0/0:29,0:29:78.06:0,78,3763	0/0:12,0:11:17.97:0,18,784
chr10	98104733	.	GAAAGAAAAAA	G	2802.16	PASS	AB=0.727;AC=5;AF=0.089;AN=56;BaseQRankSum=9.819;DP=547;FS=5.008;HRun=0;HaplotypeScore=158.6782;InbreedingCoeff=0.8896;MQ=59.67;MQ0=5;MQRankSum=-7.784;QD=44.48;ReadPosRankSum=2.387;VQSLOD=3.4455;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:14,9:23:0.16:758,0,0	0/0:8,0:8:21.07:0,21,903	0/0:14,0:6:17.93:0,18,498	0/0:18,0:11:21.96:0,22,918	0/0:17,0:17:51.16:0,51,2250	0/0:25,0:25:75.24:0,75,3247	0/0:23,0:21:60.17:0,60,2676	0/0:33,0:32:93.26:0,93,3879	0/0:10,0:10:24.08:0,24,945	0/0:32,0:32:96.32:0,96,4349	0/0:13,0:13:39.13:0,39,1838	0/0:19,0:19:42.14:0,42,1875	0/0:21,0:21:63.20:0,63,2790	0/0:15,0:15:39.13:0,39,1708	0/0:16,0:16:42.14:0,42,1773	1/1:2,12:13:24.08:716,24,0	0/0:23,0:23:69.22:0,69,3065	0/0:27,0:27:72.25:0,72,3200	0/0:21,0:21:60.21:0,60,2890	0/0:14,0:13:36.12:0,36,1564	0/0:16,0:16:48.12:0,48,1854	0/0:19,0:18:51.18:0,51,2460	0/0:17,0:17:45.15:0,45,2054	0/0:21,0:21:54.19:0,54,2491	0/0:19,0:19:54.19:0,54,2664	1/1:3,22:24:63.04:1457,63,0	0/0:32,0:32:84.29:0,84,3943	0/0:11,0:11:27.09:0,27,1018
chr10	98105897	.	T	TA	3528.29	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-6.217;DP=413;FS=9.152;HRun=6;HaplotypeScore=41.0423;InbreedingCoeff=0.8711;MQ=65.50;MQ0=0;MQRankSum=-0.417;QD=30.95;ReadPosRankSum=0.325;VQSLOD=3.5544;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:16:36.12:453,36,0	0/0:4,0:4:9.02:0,9,92	0/0:3,0:2:5.04:0,5,37	0/1:4,0:5:12.06:12,0,24	0/0:23,0:23:54.12:0,54,551	0/0:21,0:21:57.12:0,57,580	0/0:13,0:13:33.07:0,33,337	1/1:4,21:25:63.17:764,63,0	0/0:16,0:16:36.05:0,36,360	0/0:16,0:16:45.10:0,45,459	0/0:22,0:22:60.13:0,60,611	0/0:14,0:14:36.07:0,36,360	0/0:9,0:9:27.06:0,27,275	0/0:15,0:15:36.08:0,36,367	0/0:13,0:13:36.06:0,36,360	1/1:0,18:18:51.16:642,51,0	0/0:17,0:17:45.09:0,45,456	1/1:2,14:16:39.12:491,39,0	0/0:13,0:13:27.05:0,27,270	0/0:16,0:16:45.10:0,45,459	0/0:10,0:10:30.07:0,30,306	0/0:12,0:12:30.06:0,30,306	0/0:8,0:8:24.05:0,24,245	0/0:8,0:8:24.05:0,24,245	0/0:15,0:15:45.10:0,45,459	1/1:2,23:25:69.22:866,69,0	0/0:31,0:31:90.17:0,90,905	1/1:0,9:9:24.08:302,24,0
chr10	98105914	.	GA	G	349.93	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=1.239;DP=443;FS=15.644;HRun=5;HaplotypeScore=55.9623;InbreedingCoeff=0.6527;MQ=67.60;MQ0=0;MQRankSum=2.171;QD=16.66;ReadPosRankSum=-0.669;VQSLOD=1.9199;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.14:0,42,574	0/0:9,0:9:27.08:0,27,356	0/0:5,0:4:12.04:0,12,155	0/1:6,0:6:9.70:10,0,111	0/0:27,0:27:69.22:0,69,926	0/0:19,0:19:54.18:0,54,739	0/0:11,0:11:30.10:0,30,410	0/0:33,0:33:96.31:0,96,1300	1/1:2,13:15:39.11:442,39,0	0/0:15,0:15:33.11:0,33,451	0/0:23,0:23:69.23:0,69,943	0/0:14,0:14:36.12:0,36,493	0/0:11,0:11:33.11:0,33,452	0/0:12,0:12:36.12:0,36,492	0/0:15,0:15:45.13:0,45,586	0/0:15,0:15:45.15:0,45,615	0/0:17,0:17:48.12:0,48,618	0/0:20,0:20:60.20:0,60,815	0/0:12,0:12:30.10:0,30,410	0/0:19,0:19:51.17:0,51,696	0/0:9,0:9:24.08:0,24,328	0/0:13,0:13:30.10:0,30,410	0/0:10,0:10:30.10:0,30,409	0/0:9,0:9:27.09:0,27,366	0/0:19,0:19:45.15:0,45,615	0/0:29,0:29:84.26:0,84,1120	0/0:32,0:32:87.29:0,87,1189	0/0:8,0:8:24.07:0,24,312
chr10	98106281	.	G	GA	411.70	PASS	AB=0.939;AC=6;AF=0.107;AN=56;BaseQRankSum=3.058;DP=473;FS=0.000;HRun=10;HaplotypeScore=74.7315;InbreedingCoeff=0.6690;MQ=49.65;MQ0=8;MQRankSum=-2.906;QD=5.97;ReadPosRankSum=-1.040;VQSLOD=1.2879;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,13:18:8.41:281,8,0	0/0:9,0:9:20.96:0,21,172	0/0:15,0:7:23.91:0,24,187	0/0:6,0:5:8.95:0,9,71	0/0:23,0:23:38.92:0,39,318	0/0:26,2:28:41.94:0,42,537	0/0:13,0:14:35.95:0,36,295	0/0:23,0:22:44.81:0,45,355	0/0:12,0:12:29.96:0,30,246	0/1:13,1:14:1.99:2,0,192	0/0:25,1:26:58.92:0,59,468	0/0:14,0:14:38.76:0,39,309	0/0:18,0:18:41.92:0,42,345	0/0:25,0:25:53.82:0,54,437	0/0:10,0:12:22.65:0,23,162	1/1:4,0:20:45.83:243,46,0	0/0:13,0:15:34.92:0,35,270	0/0:8,0:8:10.55:0,11,55	0/1:16,1:15:2.02:2,0,190	0/0:24,0:25:61.78:0,62,474	0/0:10,0:11:19.97:0,20,154	0/0:20,0:20:38.93:0,39,320	0/0:14,0:14:26.94:0,27,221	0/0:9,0:9:17.98:0,18,148	0/0:20,2:22:21.55:0,22,359	0/0:18,0:18:38.90:0,39,314	0/0:17,0:18:34.86:0,35,266	0/0:13,0:16:43.03:0,43,332
chr10	98107092	.	A	AC	234.72	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=3.397;DP=520;FS=4.136;HRun=5;HaplotypeScore=60.3515;InbreedingCoeff=0.8240;MQ=50.05;MQ0=87;MQRankSum=-1.559;QD=10.67;ReadPosRankSum=-1.113;VQSLOD=0.7048;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:8,0:7:9.85:0,10,100	0/0:50,1:5:8.60:0,9,57	0/0:50,1:13:14.36:0,14,69	0/0:23,0:19:36.09:0,36,383	0/0:15,0:14:39.10:0,39,417	0/0:17,0:13:32.98:0,33,327	1/1:8,7:10:21:228,21,0	0/0:17,0:16:44.61:0,45,413	0/0:12,0:10:24.03:0,24,246	0/0:21,0:19:44.45:0,44,415	0/0:14,0:13:24.02:0,24,243	0/0:11,0:11:33.08:0,33,353	0/0:14,0:11:27.07:0,27,289	0/0:15,0:13:29.85:0,30,307	0/0:2,0:1:3.01:0,3,32	0/0:25,0:22:57.01:0,57,562	0/0:31,0:30:78.08:0,78,798	0/0:17,0:12:24:0,24,227	0/0:18,0:18:27.98:0,28,359	0/0:20,0:15:39.10:0,39,418	0/0:18,0:17:36.02:0,36,369	0/0:24,0:23:38.98:0,39,390	0/0:26,0:22:57.07:0,57,589	0/0:23,0:23:45.11:0,45,483	./.	0/0:22,0:17:48.12:0,48,514	1/1:4,3:7:9.03:118,9,0
chr10	98107116	.	T	TC	55.63	PASS	AB=0.873;AC=5;AF=0.093;AN=54;BaseQRankSum=5.512;DP=555;FS=21.393;HRun=0;HaplotypeScore=64.7889;InbreedingCoeff=-0.1256;MQ=54.60;MQ0=45;MQRankSum=-2.067;QD=0.66;ReadPosRankSum=-1.107;VQSLOD=-0.0563;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:3,0:3:9.03:0,9,125	0/0:66,0:7:1.38:0,1,110	0/0:64,0:19:2.10:0,2,103	0/1:24,2:25:18.47:18,0,721	0/0:18,0:18:51.04:0,51,630	0/0:9,0:9:23.95:0,24,286	0/1:13,1:14:8.98:9,0,277	0/1:17,2:18:34.77:35,0,553	0/0:18,0:15:45.06:0,45,590	0/0:19,0:19:44.98:0,45,515	0/0:15,0:15:42.14:0,42,582	0/0:16,1:17:5.41:0,5,536	0/0:14,0:14:36.08:0,36,473	0/1:18,3:22:68.54:69,0,635	0/1:2,1:2:14.86:37,0,15	0/0:34,0:33:96.21:0,96,1242	0/0:35,0:34:90.24:0,90,1207	0/0:18,0:12:27.04:0,27,318	0/0:17,0:17:45.11:0,45,590	0/0:18,0:16:45.02:0,45,532	0/0:16,0:15:42.14:0,42,585	0/0:21,0:20:45.10:0,45,584	0/0:21,0:21:60.20:0,60,833	0/0:22,0:22:54.16:0,54,721	0/0:1,0:1:3.01:0,3,42	0/0:19,0:18:45.88:0,46,666	0/0:5,0:5:9.02:0,9,101
chr10	98107205	.	TA	T	1146.11	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.991;DP=569;FS=7.998;HRun=4;HaplotypeScore=56.4342;InbreedingCoeff=0.9529;MQ=63.63;MQ0=1;MQRankSum=-8.016;QD=28.65;ReadPosRankSum=-0.341;VQSLOD=2.9831;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:21.06:250,21,0	0/0:8,0:8:21.07:0,21,313	0/0:11,0:9:21.07:0,21,315	0/0:17,0:9:16.81:0,17,280	0/0:25,0:25:69.16:0,69,976	0/0:20,0:20:57.18:0,57,833	0/0:20,0:20:60.20:0,60,891	0/0:24,0:24:69.19:0,69,988	0/0:10,0:10:30.06:0,30,424	0/0:21,0:21:63.21:0,63,942	0/0:21,0:21:63.10:0,63,881	0/0:21,0:21:63.12:0,63,887	0/0:27,0:27:81.27:0,81,1199	0/0:24,0:24:69.17:0,69,999	0/0:32,0:32:93.29:0,93,1349	1/1:0,15:15:39.12:480,39,0	0/0:38,0:38:99:0,114,1706	0/0:32,0:32:93.31:0,93,1384	0/0:14,0:14:39.10:0,39,561	0/0:16,0:16:48.16:0,48,712	0/0:24,0:24:69.21:0,69,1011	0/0:22,0:22:66.22:0,66,984	0/0:24,0:24:72.24:0,72,1050	0/0:31,0:31:93.31:0,93,1390	0/0:24,0:24:72.21:0,72,1052	1/1:1,16:17:6.20:550,6,0	0/0:16,0:16:48.16:0,48,718	0/0:7,0:7:21.07:0,21,313
chr10	98108115	.	A	AGT	626.98	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=0.575;DP=534;FS=0.000;HRun=0;HaplotypeScore=97.3982;InbreedingCoeff=0.6659;MQ=68.96;MQ0=4;MQRankSum=-2.296;QD=10.63;ReadPosRankSum=-4.558;VQSLOD=2.5351;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:17.31:0,17,98	0/0:2,0:2:6.02:0,6,77	0/0:16,0:13:23.39:0,23,205	0/0:11,0:9:16.97:0,17,95	0/0:13,0:13:32.92:0,33,330	0/0:21,0:21:42.12:0,42,536	0/0:34,0:34:87.40:0,87,1024	1/1:18,9:27:70.26:687,70,0	0/0:12,0:11:29.95:0,30,324	0/0:16,0:16:5.93:0,6,44	0/0:10,0:10:10.45:0,10,72	0/0:23,0:23:53.53:0,54,535	0/0:8,0:8:15.03:0,15,180	0/0:24,0:24:58.84:0,59,728	0/0:29,0:29:48.57:0,49,800	0/1:19,0:19:3.65:4,0,74	0/0:37,0:37:99:0,105,1269	0/0:13,0:13:11.37:0,11,87	0/0:20,0:20:38.90:0,39,390	0/0:9,0:9:20.90:0,21,198	0/0:47,0:47:99:0,116,1336	0/0:12,0:12:29.91:0,30,279	0/0:13,0:13:23.95:0,24,256	0/0:32,0:32:65.61:0,66,843	0/0:16,0:15:35.98:0,36,398	0/0:17,0:17:17.02:0,17,112	0/0:14,0:14:29.93:0,30,314	1/1:13,0:12:5.93:51,6,0
chr10	98108121	.	T	TGTGCGC	1067.29	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=-3.725;DP=581;FS=5.621;HRun=0;HaplotypeScore=149.9617;InbreedingCoeff=0.5633;MQ=65.81;MQ0=8;MQRankSum=-4.376;QD=14.23;ReadPosRankSum=-2.686;VQSLOD=2.4905;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:16.50:0,17,161	0/0:4,0:4:12.04:0,12,239	0/0:14,0:12:24.04:0,24,332	0/0:9,0:8:19.62:0,20,115	0/0:19,0:19:50.98:0,51,778	0/0:23,0:22:54.14:0,54,1090	0/0:38,0:38:99:0,105,2038	1/1:26,0:26:76.64:901,77,0	0/0:16,0:15:35.91:0,36,612	0/0:20,0:20:50.22:0,50,553	0/0:12,0:12:29.77:0,30,294	0/0:21,0:21:56.98:0,57,992	0/0:10,0:10:24.07:0,24,441	0/0:27,0:26:78.07:0,78,1423	0/0:29,0:29:86.93:0,87,1657	0/1:21,0:21:72.56:85,0,73	0/0:40,0:40:99:0,114,2376	0/1:14,0:14:42.15:42,0,72	0/0:17,0:16:44.93:0,45,684	0/0:10,0:10:26.92:0,27,388	0/0:55,0:54:99:0,135,2636	0/0:17,0:17:44.96:0,45,615	0/0:15,0:15:22.95:0,23,524	0/0:33,0:33:75.24:0,75,1675	0/0:16,0:15:38.99:0,39,696	0/0:17,0:17:36.99:0,37,267	0/0:18,0:17:45.47:0,45,769	1/1:3,9:12:6.02:168,6,0
chr10	98108126	.	G	GCGCGCACGCGCGCA	754.15	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=3.781;DP=562;FS=0.000;HRun=0;HaplotypeScore=221.6229;InbreedingCoeff=0.3555;MQ=59.42;MQ0=11;MQRankSum=-5.099;QD=14.79;ReadPosRankSum=-0.953;VQSLOD=1.8602;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:18.67:0,19,261	0/0:5,0:4:12.04:0,12,417	0/0:12,0:9:18.06:0,18,539	0/0:6,0:4:5.81:0,6,89	0/0:17,0:17:36.12:0,36,1250	0/0:24,0:23:51.17:0,51,1822	0/0:37,0:37:98.99:0,99,3413	0/1:21,0:20:16.16:16,0,330	0/0:14,0:13:27.56:0,28,958	0/0:21,0:21:52.36:0,52,1500	0/0:12,0:12:27.07:0,27,557	0/0:24,0:24:45.12:0,45,1610	0/0:10,0:10:24.03:0,24,819	0/0:27,0:26:69.22:0,69,2289	0/0:31,0:31:78.26:0,78,2701	0/1:16,0:16:49.84:113,0,50	0/0:40,0:40:99:0,108,3913	1/1:9,3:14:9.28:732,9,0	0/0:13,0:12:33.06:0,33,873	0/0:11,0:11:21.04:0,21,587	0/0:54,0:53:99:0,126,4261	0/0:16,0:16:30.07:0,30,903	0/0:15,0:15:27.09:0,27,942	0/0:39,0:39:81.19:0,81,2935	0/0:14,0:13:27.09:0,27,1017	0/0:15,0:15:24.62:0,25,581	0/0:19,0:18:39.58:0,40,1408	0/0:11,0:8:5.24:0,5,21
chr10	98108131	.	CGT	C	427.24	PASS	AB=0.977;AC=22;AF=0.423;AN=52;BaseQRankSum=3.612;DP=543;FS=6.918;HRun=0;HaplotypeScore=84.8009;InbreedingCoeff=-0.2094;MQ=54.93;MQ0=16;MQRankSum=-0.620;QD=1.11;ReadPosRankSum=-2.091;VQSLOD=0.4974;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:21:5.68:28,6,0	0/1:6,0:5:11.62:12,0,59	./.	./.	0/1:18,0:17:5.95:6,0,222	0/1:24,0:23:3.89:4,0,199	0/1:35,2:37:99:149,0,165	0/0:15,0:14:2.97:0,3,20	0/1:12,2:13:14.70:15,0,176	0/1:25,0:24:59.84:60,0,65	1/1:11,0:11:11.63:90,12,0	0/0:19,0:19:20.11:0,20,222	0/1:10,1:11:18.69:19,0,96	0/1:27,0:26:9.19:9,0,210	0/1:27,1:29:73.40:73,0,347	0/0:3,0:20:2.89:0,3,26	0/1:37,0:39:5.70:6,0,539	1/1:8,1:9:0.69:16,1,0	0/1:18,0:17:12.35:12,0,19	0/0:10,0:10:6.85:0,7,117	0/1:52,0:52:18.07:18,0,290	0/0:11,0:12:6.88:0,7,177	0/1:13,0:12:14.28:14,0,128	0/0:35,3:39:13.25:0,13,648	0/1:14,0:14:8.97:9,0,174	1/1:10,0:14:6.23:38,6,0	0/0:17,0:16:4.17:0,4,263	0/0:11,0:9:9:0,9,90
chr10	98108611	.	CA	C	272.62	PASS	AB=0.896;AC=13;AF=0.232;AN=56;BaseQRankSum=2.029;DP=631;FS=0.000;HRun=15;HaplotypeScore=92.5379;InbreedingCoeff=0.0126;MQ=56.89;MQ0=17;MQRankSum=2.261;QD=0.98;ReadPosRankSum=0.218;VQSLOD=-0.6971;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,5:43:8.49:8,0,399	0/0:9,1:12:6.85:0,7,129	0/0:11,0:7:4.97:0,5,67	0/0:10,0:9:4.72:0,5,98	0/0:27,1:27:26.71:0,27,378	0/1:13,3:17:26.31:26,0,200	0/0:16,1:15:0.52:0,1,248	1/1:12,12:24:6.77:158,7,0	0/0:21,0:21:20.87:0,21,191	0/1:23,2:26:21.79:22,0,182	0/1:20,3:23:2.31:2,0,202	0/0:13,0:14:23.68:0,24,174	0/0:21,0:22:35.54:0,36,282	0/1:25,2:27:2.82:3,0,187	0/0:23,2:26:2.36:0,2,248	0/0:25,1:27:31.52:0,32,380	0/0:27,3:31:9.56:0,10,314	0/0:30,1:32:20.63:0,21,304	0/0:22,2:22:6.40:0,6,290	0/1:17,2:19:8.70:9,0,151	0/0:13,1:14:10.72:0,11,216	0/0:16,1:15:7.70:0,8,184	0/0:16,0:15:20.66:0,21,150	0/1:28,3:29:9.89:10,0,279	0/1:13,2:17:5.59:6,0,192	0/0:23,1:26:15.62:0,16,265	0/1:26,4:32:43.59:44,0,195	1/1:4,8:14:7.95:127,8,0
chr10	98108742	.	TC	T	3119.47	PASS	AB=0.520;AC=5;AF=0.089;AN=56;BaseQRankSum=10.288;DP=725;FS=0.413;HRun=3;HaplotypeScore=67.9641;InbreedingCoeff=0.8104;MQ=87.36;MQ0=2;MQRankSum=-0.751;QD=29.99;ReadPosRankSum=3.472;VQSLOD=3.4315;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,43:45:99:1413,114,0	0/0:7,0:7:21.07:0,21,301	0/0:26,0:26:69.21:0,69,971	0/0:26,0:26:75.21:0,75,1038	0/0:16,0:16:45.15:0,45,648	0/0:22,0:22:60.19:0,60,846	0/0:24,0:24:69.20:0,69,954	0/0:39,0:39:99:0,114,1572	0/0:27,0:27:81.19:0,81,1087	0/0:27,0:27:75.24:0,75,1059	0/0:18,0:18:54.17:0,54,759	0/0:31,0:31:84.27:0,84,1193	0/0:35,0:35:99:0,102,1441	0/0:26,0:26:75.18:0,75,1021	0/0:38,0:37:99:0,111,1545	1/1:2,31:33:47.07:1035,47,0	0/0:24,0:24:72.24:0,72,1033	0/0:20,0:20:60.20:0,60,863	0/0:21,0:21:63.18:0,63,869	0/0:22,0:22:66.21:0,66,924	0/0:48,0:46:99:0,135,1869	0/0:16,0:16:48.14:0,48,657	0/0:25,0:25:72.24:0,72,1036	0/0:27,0:27:78.24:0,78,1099	0/0:24,0:24:66.21:0,66,932	0/1:2,24:26:8.06:801,0,8	0/0:26,0:26:75.22:0,75,1054	0/0:6,0:6:18.06:0,18,259
chr10	98109690	.	GA	G	165.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.205;DP=391;FS=3.211;HRun=6;HaplotypeScore=40.0068;InbreedingCoeff=0.6286;MQ=68.39;MQ0=0;MQRankSum=-0.237;QD=16.50;ReadPosRankSum=-1.873;VQSLOD=2.5731;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.21:0,66,868	0/0:14,0:14:39.13:0,39,512	0/0:8,0:6:15.04:0,15,187	0/0:4,0:3:2.37:0,2,8	0/0:21,0:21:63.19:0,63,813	0/0:22,0:22:66.18:0,66,849	0/0:5,0:5:15.05:0,15,197	0/0:41,0:41:99:0,105,1379	0/0:9,0:9:27.09:0,27,355	0/0:18,0:18:54.17:0,54,697	0/0:20,0:20:57.19:0,57,750	0/0:5,0:5:15.05:0,15,197	0/0:3,0:3:9.03:0,9,118	0/0:6,0:6:17.99:0,18,215	0/0:8,0:8:24.07:0,24,302	1/1:2,8:10:24.06:258,24,0	0/0:19,0:19:57.19:0,57,750	0/0:22,0:22:66.21:0,66,868	0/0:19,0:19:54.18:0,54,708	0/0:17,0:17:51.17:0,51,671	0/0:6,0:6:15.05:0,15,197	0/0:2,0:2:6.02:0,6,79	0/0:5,0:5:15.05:0,15,197	0/0:1,0:1:3.01:0,3,39	0/0:30,0:30:87.28:0,87,1144	0/0:25,0:25:75.24:0,75,974	0/0:10,0:10:30.08:0,30,380	0/0:16,0:16:44.88:0,45,565
chr10	98109804	.	T	TCAGGGGC	4389.37	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-4.073;DP=492;FS=2.213;HRun=0;HaplotypeScore=106.4937;InbreedingCoeff=0.9984;MQ=81.99;MQ0=0;MQRankSum=-8.326;QD=70.80;ReadPosRankSum=1.744;VQSLOD=4.8544;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:29:42.14:1665,42,0	0/0:9,0:9:24.08:0,24,622	0/0:16,0:16:45.12:0,45,989	0/0:16,0:16:36.59:0,37,827	0/0:15,0:15:45.14:0,45,1077	0/0:26,0:26:72.16:0,72,1725	0/0:26,0:26:75.23:0,75,1796	0/0:28,0:28:78.25:0,78,1875	0/0:13,0:13:39.12:0,39,960	0/0:19,0:19:57.18:0,57,1358	0/0:17,0:17:51.15:0,51,1160	0/0:12,0:12:36.12:0,36,878	0/0:13,0:13:36.12:0,36,871	0/0:13,0:13:36.12:0,36,903	0/0:23,0:23:69.24:0,69,1729	1/1:0,12:16:33.11:1316,33,0	0/0:21,0:21:60.14:0,60,1326	0/0:13,0:13:33.09:0,33,801	0/0:20,0:20:60.20:0,60,1451	0/0:14,0:14:39.12:0,39,928	0/0:21,0:21:60.21:0,60,1487	0/0:18,0:18:48.16:0,48,1247	0/0:19,0:19:54.16:0,54,1283	0/0:16,0:16:45.12:0,45,969	0/0:14,0:14:39.13:0,39,883	1/1:2,10:17:45.11:1409,45,0	0/0:17,0:17:48.16:0,48,1247	0/0:11,0:11:27.09:0,27,701
chr10	98110654	.	C	CTAGGA	2819.92	PASS	AB=0.868;AC=7;AF=0.125;AN=56;BaseQRankSum=-6.185;DP=578;FS=5.102;HRun=0;HaplotypeScore=96.3686;InbreedingCoeff=0.6049;MQ=68.20;MQ0=20;MQRankSum=-0.697;QD=21.86;ReadPosRankSum=-1.657;VQSLOD=2.8967;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,15:24:15.05:436,15,0	0/0:14,0:11:15.05:0,15,277	0/1:18,0:4:0.72:18,0,1	0/1:31,0:12:35.63:36,0,110	0/0:25,0:21:39.11:0,39,702	0/0:24,0:23:27.09:0,27,505	0/0:13,0:13:33.09:0,33,585	0/0:28,0:27:36:0,36,573	0/0:20,0:20:54.18:0,54,990	0/0:19,0:17:27.09:0,27,502	0/0:24,0:22:42.14:0,42,786	0/0:25,0:25:63.21:0,63,1164	0/0:22,0:22:60.19:0,60,1095	0/0:24,0:24:57.18:0,57,1036	0/0:15,0:15:42.13:0,42,768	1/1:9,17:27:48.16:1372,48,0	0/0:35,0:34:72.23:0,72,1320	0/0:15,0:15:21.03:0,21,321	0/0:15,0:14:15.05:0,15,286	0/0:16,0:16:30.07:0,30,535	0/0:18,0:18:39.12:0,39,706	0/0:8,0:8:9.03:0,9,171	0/0:12,0:11:24.08:0,24,457	0/0:25,0:25:57.20:0,57,1075	0/0:11,0:10:15.05:0,15,278	0/1:9,17:24:7.77:1100,0,8	0/0:29,0:27:48.16:0,48,914	0/0:12,0:11:24.08:0,24,457
chr10	98110932	.	TTG	T	817.68	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=7.137;DP=370;FS=14.157;HRun=0;HaplotypeScore=60.4380;InbreedingCoeff=0.7937;MQ=82.25;MQ0=5;MQRankSum=-2.906;QD=9.29;ReadPosRankSum=-0.791;VQSLOD=1.2981;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:27.30:97,27,0	0/0:6,0:6:15.02:0,15,206	0/0:42,0:23:62.93:0,63,730	0/1:28,0:12:4.48:4,0,196	0/0:20,0:19:40.40:0,40,615	0/0:8,0:8:24.05:0,24,365	0/0:15,0:14:36.11:0,36,595	1/1:2,19:21:51.98:631,52,0	0/0:8,0:8:24.06:0,24,386	0/0:10,0:10:30.08:0,30,454	0/0:11,0:10:25.65:0,26,402	0/0:19,0:18:48.08:0,48,698	0/0:4,0:4:12.02:0,12,183	0/0:5,0:5:15.05:0,15,251	0/0:5,0:5:12.02:0,12,183	0/1:10,0:10:2.03:28,0,2	0/0:29,0:28:81.21:0,81,1322	0/0:14,0:14:33.02:0,33,487	0/0:15,0:15:39.01:0,39,515	0/0:14,0:14:36.11:0,36,587	0/0:13,0:13:36.11:0,36,586	0/0:9,0:9:24.03:0,24,313	0/0:5,0:5:15.02:0,15,206	0/0:8,0:8:15.01:0,15,205	0/0:11,0:11:33.09:0,33,523	1/1:10,0:10:22.29:91,22,0	0/0:11,0:11:27.07:0,27,433	1/1:2,3:5:9.03:129,9,0
chr10	98110935	.	TG	T	1224.01	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.678;DP=377;FS=12.480;HRun=1;HaplotypeScore=56.9670;InbreedingCoeff=0.9171;MQ=77.73;MQ0=6;MQRankSum=-0.927;QD=22.25;ReadPosRankSum=0.159;VQSLOD=2.2745;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:33.11:452,33,0	0/0:6,0:6:15.01:0,15,173	0/0:45,0:21:57.57:0,58,582	0/0:28,0:11:3.96:0,4,150	0/0:22,0:21:36.80:0,37,507	0/0:8,0:8:24.05:0,24,299	0/0:15,0:14:36.10:0,36,473	1/1:21,0:21:33.71:339,34,0	0/0:8,0:8:24.06:0,24,315	0/0:12,0:12:30.06:0,30,375	0/0:13,0:11:29.79:0,30,350	0/0:18,0:17:48.08:0,48,573	0/0:4,0:4:12.02:0,12,149	0/0:6,0:6:15.03:0,15,192	0/0:6,0:6:12.02:0,12,149	1/1:1,7:8:12.65:199,13,0	0/0:28,0:27:81.19:0,81,1049	0/0:15,0:14:33:0,33,399	0/0:16,0:16:41.99:0,42,460	0/0:13,0:13:36.02:0,36,461	0/0:12,0:12:36.10:0,36,480	0/0:9,0:9:24.02:0,24,266	0/0:8,0:7:18.03:0,18,216	0/0:7,0:7:15:0,15,172	0/0:13,0:13:33.06:0,33,405	1/1:0,9:9:27.08:352,27,0	0/0:10,0:10:30.05:0,30,361	1/1:3,0:3:8.77:51,9,0
chr10	98110970	.	TC	T	2131.59	PASS	AB=0.995;AC=31;AF=0.574;AN=54;BaseQRankSum=4.284;DP=444;FS=0.000;HRun=1;HaplotypeScore=46.1124;InbreedingCoeff=-0.2083;MQ=34.92;MQ0=53;MQRankSum=-1.253;QD=5.78;ReadPosRankSum=0.614;VQSLOD=0.2479;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,1:28:73.63:533,74,0	0/0:6,1:3:8.05:0,8,69	0/0:12,0:3:2.65:0,3,19	./.	0/1:34,0:24:69.61:70,0,76	1/1:10,0:9:0.06:45,0,0	0/1:12,1:10:12.34:12,0,70	1/1:26,0:25:37.58:383,38,0	0/1:8,0:7:9.83:10,0,20	0/0:18,5:18:7.13:0,7,221	0/1:21,0:14:20.12:20,0,54	1/1:10,0:10:1.24:52,1,0	0/1:9,0:9:6.48:61,0,6	0/1:9,0:8:21.01:68,0,21	0/1:13,0:8:10.65:11,0,62	1/1:14,0:13:31.36:236,31,0	0/1:33,0:27:97.40:144,0,97	1/1:22,0:18:32.33:208,32,0	0/1:22,0:14:15.95:16,0,107	0/1:18,0:18:24.07:24,0,111	0/1:4,0:4:20.57:21,0,35	0/0:7,0:5:11.39:0,11,73	0/1:7,0:7:12.18:25,0,12	0/1:6,0:5:8.08:8,0,21	0/1:14,0:11:12.38:12,0,92	1/1:23,0:17:17.13:227,17,0	0/1:12,0:11:34.16:34,0,40	1/1:7,0:4:8.98:74,9,0
chr10	98112416	.	T	TTTTTG	1472.80	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.238;DP=677;FS=3.979;HRun=0;HaplotypeScore=124.2284;InbreedingCoeff=0.9547;MQ=64.87;MQ0=3;MQRankSum=-7.540;QD=24.14;ReadPosRankSum=-3.037;VQSLOD=2.4535;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,21:38:54.18:1183,54,0	0/0:9,0:9:24.08:0,24,409	0/0:20,0:16:22.03:0,22,616	0/0:27,0:24:44.92:0,45,730	0/0:24,0:24:54.18:0,54,1002	0/0:22,0:22:57.19:0,57,1026	0/0:25,0:25:69.23:0,69,1294	0/0:26,0:26:45.14:0,45,732	0/0:26,0:26:69.22:0,69,1222	0/0:30,0:30:75.24:0,75,1323	0/0:30,0:30:63.21:0,63,1148	0/0:26,0:26:72.25:0,72,1332	0/0:20,0:20:48.16:0,48,887	0/0:30,0:30:69.22:0,69,1223	0/0:29,0:29:57.18:0,57,1027	0/0:34,0:34:81.28:0,81,1519	0/0:23,0:23:57.19:0,57,1046	1/1:15,5:23:12.83:406,13,0	0/0:18,0:18:36.11:0,36,660	0/0:26,0:26:60.18:0,60,1069	0/0:25,0:25:57.19:0,57,1060	0/0:20,0:20:51.17:0,51,920	0/0:14,0:14:42.13:0,42,757	0/0:26,0:26:72.24:0,72,1351	0/0:28,0:28:69.24:0,69,1307	0/0:20,0:20:51.17:0,51,979	0/0:31,0:30:78.25:0,78,1429	0/0:6,0:6:9.03:0,9,173
chr10	98113015	.	AAGGCAGGTTTAT	A	2028.70	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.358;DP=680;FS=0.883;HRun=0;HaplotypeScore=219.4503;InbreedingCoeff=0.9693;MQ=68.58;MQ0=0;MQRankSum=-6.785;QD=56.35;ReadPosRankSum=0.879;VQSLOD=2.9661;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:48.12:1787,48,0	0/0:17,0:17:51.16:0,51,2744	0/0:25,0:25:72.24:0,72,3628	0/0:18,0:18:50.30:0,50,2618	0/0:26,0:26:78.27:0,78,4302	0/0:23,0:23:69.24:0,69,4284	0/0:17,0:17:51.18:0,51,2979	0/0:34,0:34:99:0,102,5441	0/0:18,0:18:54.19:0,54,3132	0/0:35,0:35:99:0,105,6297	0/0:20,0:20:60.19:0,60,3508	0/0:21,0:21:63.22:0,63,3592	0/0:24,0:24:72.23:0,72,4260	0/0:18,0:18:54.17:0,54,3227	0/0:27,0:27:81.27:0,81,4485	0/0:25,0:25:75.24:0,75,4139	0/0:38,0:38:99:0,114,6419	1/1:0,11:11:9.03:356,9,0	0/0:23,0:23:69.21:0,69,3491	0/0:37,0:37:99:0,111,6850	0/0:30,0:30:90.31:0,90,5344	0/0:30,0:30:90.31:0,90,5367	0/0:18,0:18:54.17:0,54,2875	0/0:23,0:23:69.23:0,69,4011	0/0:29,0:29:87.30:0,87,5416	0/0:22,0:22:66.22:0,66,3880	0/0:31,0:30:93.30:0,93,5421	0/0:15,0:15:45.15:0,45,2495
chr10	98113156	.	G	GGGGGATTCT	1211.62	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.122;DP=577;FS=0.000;HRun=0;HaplotypeScore=158.9244;InbreedingCoeff=0.9827;MQ=92.45;MQ0=0;MQRankSum=-6.088;QD=34.62;ReadPosRankSum=-1.991;VQSLOD=3.0769;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,16:35:39.13:1306,39,0	0/0:13,0:13:27.09:0,27,740	0/0:31,0:31:43.36:0,43,589	0/0:28,0:27:50.78:0,51,786	0/0:23,0:23:57.19:0,57,1443	0/0:18,0:18:30.09:0,30,609	0/0:13,0:13:24.07:0,24,612	0/0:35,0:35:48.14:0,48,933	0/0:15,0:15:30.10:0,30,778	0/0:23,0:23:57.15:0,57,1417	0/0:24,0:24:48.16:0,48,1249	0/0:19,0:19:48.15:0,48,1090	0/0:20,0:20:48.15:0,48,1234	0/0:17,0:17:39.13:0,39,1006	0/0:21,0:21:42.14:0,42,987	0/0:24,0:24:57.20:0,57,1474	0/0:12,0:12:21.07:0,21,525	0/0:16,0:16:39.13:0,39,1017	0/0:22,0:22:45.15:0,45,1043	0/0:11,0:11:27.09:0,27,695	0/0:21,0:21:45.15:0,45,1060	0/0:25,0:25:51.17:0,51,1237	0/0:19,0:19:39.10:0,39,930	0/0:29,0:29:78.22:0,78,1880	0/0:13,0:13:36.12:0,36,923	0/0:16,0:16:42.14:0,42,1003	0/0:25,0:25:51.15:0,51,1310	0/0:9,0:9:18.06:0,18,482
chr10	98113675	.	G	GGGTTT	1802.10	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.744;DP=709;FS=1.391;HRun=0;HaplotypeScore=143.6701;InbreedingCoeff=0.9473;MQ=79.13;MQ0=3;MQRankSum=-6.445;QD=20.95;ReadPosRankSum=-0.880;VQSLOD=3.2869;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:39:21.06:387,21,0	0/0:12,0:12:30.10:0,30,529	0/0:38,0:31:19.19:0,19,315	0/0:32,0:27:4.47:0,4,206	0/0:28,0:28:51.15:0,51,846	0/0:17,0:17:30.10:0,30,547	0/0:24,0:24:45.17:0,45,887	0/0:30,0:30:48.14:0,48,769	0/0:24,0:24:51.15:0,51,847	0/0:23,0:23:51.17:0,51,879	0/0:24,0:24:42.14:0,42,767	0/0:23,0:23:57.15:0,57,952	0/0:28,0:28:54.17:0,54,946	0/0:21,0:21:51.14:0,51,856	0/0:31,0:31:72.25:0,72,1293	1/1:10,15:27:42.14:1196,42,0	0/0:33,0:33:58.55:0,59,1239	1/1:20,0:19:24.03:361,24,0	0/0:24,0:24:39.10:0,39,592	0/0:22,0:22:60.21:0,60,1105	0/0:45,0:45:99:0,105,1852	0/0:19,0:19:45.14:0,45,769	0/0:20,0:20:42.10:0,42,731	0/0:33,0:33:69.24:0,69,1227	0/0:18,0:18:39.12:0,39,682	0/0:15,0:15:36.12:0,36,659	0/0:28,0:28:78.23:0,78,1304	0/0:11,0:11:24.08:0,24,446
chr10	98114455	.	TGCCTG	T	1431.46	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.257;DP=788;FS=0.778;HRun=0;HaplotypeScore=147.5144;InbreedingCoeff=0.9839;MQ=87.13;MQ0=0;MQRankSum=-5.722;QD=49.36;ReadPosRankSum=-2.203;VQSLOD=3.5904;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,4157	0/0:14,0:14:42.14:0,42,1250	0/0:28,0:28:73.92:0,74,2122	0/0:27,0:27:66.70:0,67,1879	0/0:20,0:20:54.19:0,54,1744	0/0:17,0:17:51.18:0,51,1642	0/0:45,0:45:99:0,135,4336	1/1:2,20:22:60.19:1280,60,0	0/0:27,0:27:78.25:0,78,2438	0/0:31,0:31:93.32:0,93,2966	0/0:28,0:28:78.27:0,78,2499	0/0:27,0:27:81.28:0,81,2591	0/0:30,0:30:90.31:0,90,2868	0/0:34,0:34:99:0,102,3239	0/0:37,0:37:99:0,108,3452	0/0:20,0:20:60.20:0,60,1846	0/0:39,0:39:99:0,114,3630	0/0:30,0:30:84.29:0,84,2687	0/0:20,0:20:60.21:0,60,1920	0/0:22,0:22:66.21:0,66,2046	0/0:53,0:53:99:0,160,4970	0/0:22,0:22:63.22:0,63,2034	0/0:20,0:20:60.21:0,60,1939	0/0:34,0:34:99:0,102,3257	0/0:27,0:27:81.28:0,81,2618	0/0:32,0:32:96.33:0,96,3059	0/0:31,0:30:93.32:0,93,2905	1/1:0,7:7:12.04:268,12,0
chr10	98115669	.	TGTCGTCGTCGTCGTCGTCGTC	T	1455.74	PASS	AB=0.872;AC=4;AF=0.071;AN=56;BaseQRankSum=4.878;DP=693;FS=3.694;HRun=0;HaplotypeScore=374.7883;InbreedingCoeff=-0.0542;MQ=54.31;MQ0=7;MQRankSum=-5.607;QD=12.88;ReadPosRankSum=-3.789;VQSLOD=0.5459;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:37,2:38:99:724,0,426	0/0:6,0:6:12.04:0,12,997	0/0:29,0:18:15.05:0,15,367	0/0:37,0:21:10.39:0,10,285	0/0:16,0:16:27.09:0,27,1533	0/0:15,0:15:42.14:0,42,3832	0/0:32,0:32:69.22:0,69,4765	0/0:41,0:39:3.01:0,3,43	0/0:25,0:26:69.24:0,69,5155	0/0:14,0:14:12.03:0,12,571	0/0:10,0:10:15.05:0,15,1264	0/0:29,0:29:57.16:0,57,4059	0/0:27,0:27:57.20:0,57,3722	0/0:33,0:32:60.19:0,60,3415	0/0:34,0:32:60.19:0,60,4035	0/1:32,12:44:99:276,0,1258	0/0:43,0:43:99:0,111,8962	0/1:27,0:27:99:403,0,605	0/0:14,0:11:15.05:0,15,1000	0/0:9,0:9:15.05:0,15,1072	0/0:37,0:37:51.16:0,51,3527	0/0:19,0:19:30.10:0,30,2364	0/0:16,0:16:27.09:0,27,1884	0/0:37,0:37:81.26:0,81,6176	0/0:16,0:16:36.12:0,36,2611	0/0:17,0:21:45.14:0,45,1916	0/0:19,0:19:39.12:0,39,2739	0/1:2,1:3:10.42:161,0,10
chr10	98115671	.	TCG	T	63.72	PASS	AB=0.768;AC=3;AF=0.054;AN=56;BaseQRankSum=7.789;DP=676;FS=3.176;HRun=0;HaplotypeScore=130.0613;InbreedingCoeff=0.5792;MQ=53.60;MQ0=7;MQRankSum=-4.192;QD=1.39;ReadPosRankSum=3.291;VQSLOD=2.3526;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:60.03:0,60,503	0/0:6,0:6:18.05:0,18,285	0/0:27,0:16:39.12:0,39,496	0/0:35,0:18:50.49:0,50,570	0/0:13,0:13:36.11:0,36,540	0/0:17,0:17:48.16:0,48,915	0/0:31,0:31:87.27:0,87,1397	0/0:40,0:38:55.63:0,56,820	0/0:26,0:26:74.49:0,74,1250	0/0:15,0:15:42.03:0,42,565	0/0:10,0:10:27.09:0,27,437	0/0:30,0:30:84.28:0,84,1341	0/0:29,0:29:84.21:0,84,1249	0/0:31,0:30:84.28:0,84,1263	0/0:32,0:30:90.25:0,90,1401	0/1:30,13:43:99:114,0,298	0/0:41,0:41:99:0,123,2219	0/0:27,0:27:54.96:0,55,528	0/0:15,0:12:36.10:0,36,496	0/0:10,0:10:30.08:0,30,461	0/0:37,0:37:99:0,99,1485	0/0:19,0:19:48.15:0,48,776	0/0:16,0:16:39.11:0,39,632	0/0:36,0:36:99:0,108,1789	0/0:15,0:15:39.13:0,39,657	0/0:18,0:18:36.33:0,36,477	0/0:17,0:17:45.15:0,45,750	1/1:3,0:3:8.15:46,8,0
chr10	98115990	.	ACC	A	401.89	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.316;DP=498;FS=24.844;HRun=10;HaplotypeScore=74.5724;InbreedingCoeff=0.9349;MQ=69.82;MQ0=0;MQRankSum=-0.527;QD=14.88;ReadPosRankSum=-0.520;VQSLOD=0.2147;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:63.12:0,63,829	0/0:9,0:9:21.05:0,21,289	0/0:10,0:10:18.06:0,18,243	0/0:8,0:7:15.04:0,15,182	0/0:8,0:8:15.04:0,15,216	0/0:14,0:16:30.08:0,30,433	0/0:31,0:32:71.71:0,72,1040	1/1:11,7:18:21.01:234,21,0	0/0:14,0:14:36.11:0,36,544	0/0:10,0:12:20.13:0,20,246	0/0:4,0:9:9.48:0,9,102	0/0:18,0:18:49.09:0,49,740	0/0:26,0:26:66.21:0,66,1021	0/0:22,0:22:57.18:0,57,853	0/0:20,0:20:51.16:0,51,783	0/0:23,0:23:54.16:0,54,809	0/0:38,0:37:99:0,99,1459	0/0:18,0:22:54.52:0,55,608	0/0:13,0:14:26.57:0,27,355	0/0:10,0:10:15.05:0,15,229	0/0:32,0:33:59.21:0,59,788	0/0:11,0:11:18.52:0,19,265	0/0:12,0:12:27.07:0,27,390	0/0:17,0:20:41.28:0,41,568	0/0:13,0:13:38.59:0,39,524	0/0:20,0:20:36.11:0,36,550	0/0:15,0:15:42.14:0,42,664	1/1:1,8:9:27.04:288,27,0
chr10	98116095	.	GAT	G	4685.96	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.910;DP=563;FS=1.761;HRun=0;HaplotypeScore=74.1235;InbreedingCoeff=0.9988;MQ=84.92;MQ0=0;MQRankSum=-0.200;QD=40.75;ReadPosRankSum=1.872;VQSLOD=6.5442;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:34:99:1437,99,0	0/0:7,0:7:21.07:0,21,393	0/0:18,0:18:54.14:0,54,932	0/0:18,0:18:48.14:0,48,844	0/0:14,0:14:42.14:0,42,785	0/0:19,0:19:54.19:0,54,1011	0/0:20,0:20:57.16:0,57,1004	1/1:1,32:33:90.29:1300,90,0	0/0:17,0:17:51.17:0,51,955	0/0:25,0:25:75.25:0,75,1364	0/0:23,0:23:63.22:0,63,1157	0/0:23,0:23:66.23:0,66,1236	0/0:11,0:11:30.10:0,30,562	0/0:20,0:20:60.21:0,60,1108	0/0:22,0:22:66.21:0,66,1205	1/1:1,13:14:42.11:580,42,0	0/0:31,0:31:93.30:0,93,1676	1/1:0,23:23:60.20:883,60,0	0/0:18,0:18:51.15:0,51,907	0/0:18,0:18:51.13:0,51,900	0/0:21,0:21:57.20:0,57,1067	0/0:26,0:26:75.24:0,75,1372	0/0:21,0:21:60.20:0,60,1102	0/0:19,0:19:54.19:0,54,1010	0/0:15,0:15:42.14:0,42,786	0/0:24,0:24:72.25:0,72,1349	0/0:18,0:18:54.17:0,54,978	1/1:0,11:11:33.11:486,33,0
chr10	98116189	.	A	AC	5157.14	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.030;DP=641;FS=0.000;HRun=1;HaplotypeScore=75.5739;InbreedingCoeff=0.9961;MQ=84.29;MQ0=0;MQRankSum=0.898;QD=42.62;ReadPosRankSum=-0.648;VQSLOD=4.6790;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:36:99:1556,108,0	0/0:5,0:5:15.05:0,15,195	0/0:18,0:18:50.71:0,51,644	0/0:24,0:24:59.09:0,59,767	0/0:21,0:21:60.20:0,60,778	0/0:18,0:18:51.15:0,51,648	0/0:29,0:29:87.28:0,87,1130	1/1:0,27:27:81.27:1212,81,0	0/0:21,0:21:57.18:0,57,740	0/0:23,0:23:66.19:0,66,835	0/0:12,0:12:33.11:0,33,426	0/0:26,0:26:78.24:0,78,991	0/0:17,0:17:48.16:0,48,623	0/0:30,0:30:84.27:0,84,1090	0/0:21,0:21:63.20:0,63,818	1/1:1,27:28:45.32:1175,45,0	0/0:38,0:38:99:0,114,1478	1/1:1,19:20:51.17:764,51,0	0/0:21,0:21:60.19:0,60,767	0/0:19,0:19:57.18:0,57,738	0/0:26,0:26:78.25:0,78,1013	0/0:18,0:18:48.14:0,48,608	0/0:26,0:26:69.20:0,69,873	0/0:24,0:24:69.21:0,69,881	0/0:21,0:20:60.13:0,60,732	0/0:30,0:30:81.26:0,81,1052	0/0:32,0:32:96.30:0,96,1230	1/1:0,10:10:30.10:449,30,0
chr10	98117859	.	CT	C	1268.43	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.022;DP=819;FS=3.100;HRun=2;HaplotypeScore=83.8532;InbreedingCoeff=0.9990;MQ=85.98;MQ0=0;MQRankSum=-1.829;QD=33.38;ReadPosRankSum=1.906;VQSLOD=3.9099;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:99:1363,105,0	0/0:9,0:9:27.09:0,27,405	0/0:30,0:30:90.25:0,90,1262	0/0:25,0:25:63.17:0,63,895	0/0:36,0:36:99:0,102,1504	0/0:24,0:24:72.24:0,72,1075	0/0:22,0:22:63.19:0,63,902	0/0:33,0:33:93.32:0,93,1393	0/0:40,0:40:99:0,117,1716	0/0:30,0:30:90.28:0,90,1327	0/0:17,0:17:48.09:0,48,670	0/0:25,0:25:75.25:0,75,1105	0/0:36,0:36:99:0,108,1581	0/0:22,0:22:66.22:0,66,988	0/0:43,0:43:99:0,129,1933	0/0:44,0:44:99:0,132,1940	0/0:28,0:28:81.25:0,81,1175	0/0:17,0:17:48.16:0,48,719	0/0:22,0:22:63.18:0,63,900	0/0:24,0:24:72.23:0,72,1058	0/0:42,0:42:99:0,123,1798	0/0:38,0:38:99:0,108,1592	0/0:21,0:21:57.19:0,57,854	0/0:24,0:24:72.24:0,72,1079	0/0:35,0:35:99:0,102,1488	0/0:44,0:44:99:0,132,1946	0/0:32,0:31:96.32:0,96,1434	0/0:18,0:18:54.18:0,54,809
chr10	98118589	.	CGT	C	455.61	PASS	AB=0.918;AC=14;AF=0.259;AN=54;BaseQRankSum=6.437;DP=675;FS=7.501;HRun=0;HaplotypeScore=99.0302;InbreedingCoeff=-0.1883;MQ=62.23;MQ0=10;MQRankSum=-2.150;QD=1.51;ReadPosRankSum=-0.017;VQSLOD=0.7976;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:11.99:0,12,102	0/0:7,0:8:0.89:0,1,150	./.	0/1:37,1:12:25.61:26,0,46	0/1:19,3:22:63.87:64,0,385	0/1:15,2:17:38.32:38,0,338	0/1:28,1:29:5.87:6,0,757	0/0:30,0:27:20.80:0,21,148	0/0:24,3:26:22.67:0,23,736	0/0:21,1:22:22.67:0,23,707	0/0:17,2:19:7.55:0,8,517	0/1:18,3:21:72.49:72,0,443	0/0:29,0:29:25.71:0,26,843	0/0:22,1:23:11.85:0,12,538	0/1:24,2:27:25.91:26,0,686	0/0:12,0:15:11.99:0,12,104	0/0:37,2:39:15.34:0,15,1116	0/0:19,0:37:75:0,75,730	0/1:18,1:19:21.58:22,0,260	0/1:16,4:20:52.28:52,0,567	0/1:28,2:30:34.25:34,0,676	0/0:21,0:21:32.96:0,33,457	0/1:13,1:14:38.90:39,0,319	0/0:31,1:32:24.42:0,24,819	0/1:21,1:22:26.86:27,0,490	1/1:21,0:21:34.11:169,34,0	0/1:19,1:20:36.12:36,0,569	0/0:6,0:5:8.90:0,9,60
chr10	98118611	.	TGTGTGTGC	T	1116.49	PASS	AB=0.770;AC=2;AF=0.036;AN=56;BaseQRankSum=4.993;DP=706;FS=9.956;HRun=0;HaplotypeScore=178.3395;InbreedingCoeff=-0.0364;MQ=57.97;MQ0=13;MQRankSum=-1.959;QD=17.72;ReadPosRankSum=-1.709;VQSLOD=1.8177;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:42:95.68:96,0,543	0/0:9,0:9:27.05:0,27,793	0/0:31,0:12:35.05:0,35,447	0/0:37,0:14:34.57:0,35,607	0/0:19,0:19:57.04:0,57,1781	0/0:16,0:16:47.79:0,48,1394	0/0:35,0:35:96.58:0,97,3119	0/0:26,0:23:59.60:0,60,1034	0/0:33,0:32:86.85:0,87,2793	0/0:26,0:26:78.12:0,78,2785	0/0:22,0:22:54.14:0,54,1954	0/0:21,0:21:55.31:0,55,1957	0/0:28,0:28:81.06:0,81,3028	0/0:20,0:20:60.21:0,60,2232	0/0:30,0:30:87.18:0,87,2947	0/0:13,0:13:17.83:0,18,475	0/0:41,0:41:99:0,119,4204	0/0:37,0:36:93.07:0,93,3174	0/0:17,0:16:45.37:0,45,1324	0/0:21,0:21:60.13:0,60,2204	0/0:38,0:38:99:0,100,3040	0/0:24,0:24:62.31:0,62,1859	0/0:14,0:14:41.96:0,42,1435	0/0:34,0:34:93.05:0,93,3058	0/0:21,0:21:57.02:0,57,1959	0/1:3,17:20:28.82:1110,0,29	0/0:22,0:21:64.56:0,65,2173	0/0:7,0:6:18.06:0,18,456
chr10	98119520	.	CT	C	631.85	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.993;DP=617;FS=3.729;HRun=7;HaplotypeScore=92.9745;InbreedingCoeff=0.9890;MQ=77.57;MQ0=0;MQRankSum=-1.738;QD=23.40;ReadPosRankSum=-1.448;VQSLOD=2.9674;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:78.20:0,78,951	0/0:8,0:8:24.08:0,24,301	0/0:17,0:17:17.94:0,18,432	0/0:15,0:16:41.86:0,42,447	0/0:29,0:29:81.26:0,81,1019	0/0:23,0:23:66.21:0,66,830	0/0:23,0:23:60.18:0,60,739	0/0:18,0:18:45.13:0,45,545	0/0:21,0:21:63.20:0,63,792	0/0:25,0:25:72.22:0,72,896	0/0:17,0:17:51.15:0,51,630	0/0:29,0:29:84.24:0,84,1029	0/0:25,0:25:72.23:0,72,905	0/0:20,0:20:57.14:0,57,699	0/0:31,0:31:90.29:0,90,1128	0/0:18,0:18:48.15:0,48,604	0/0:29,0:29:75.24:0,75,944	0/0:24,0:24:69.22:0,69,868	0/0:17,0:17:45.14:0,45,565	0/0:17,0:17:42.12:0,42,505	0/0:16,0:16:33.11:0,33,415	0/0:28,0:28:75.21:0,75,906	0/0:17,0:17:45.10:0,45,548	0/0:21,0:21:54.17:0,54,679	0/0:20,0:20:51.14:0,51,627	1/1:7,20:27:51.62:727,52,0	0/0:33,0:33:97.52:0,98,1183	0/0:13,0:13:30.08:0,30,364
chr10	98119653	.	A	AAG	16919.87	PASS	AB=0.750;AC=54;AF=0.964;AN=56;BaseQRankSum=-0.971;DP=449;FS=0.000;HRun=0;HaplotypeScore=270.9815;InbreedingCoeff=-0.0302;MQ=55.62;MQ0=0;MQRankSum=-3.685;QD=37.68;ReadPosRankSum=2.084;VQSLOD=4.1445;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:63.21:961,63,0	1/1:1,7:8:21.07:315,21,0	0/1:4,2:5:2.15:100,0,2	0/1:12,5:18:9.14:364,0,9	1/1:5,11:16:30.10:413,30,0	1/1:0,19:19:57.19:859,57,0	1/1:7,16:23:57.19:868,57,0	1/1:6,7:13:29.74:454,30,0	1/1:2,15:17:48.16:712,48,0	1/1:2,13:15:45.15:700,45,0	1/1:2,9:10:27.08:341,27,0	1/1:6,19:25:60.20:906,60,0	1/1:4,13:17:48.16:730,48,0	1/1:4,16:20:54.15:746,54,0	1/1:4,20:24:69.23:1042,69,0	1/1:3,13:16:42.12:615,42,0	1/1:1,13:13:36.09:504,36,0	1/1:2,15:17:48.16:764,48,0	1/1:6,10:16:48.10:703,48,0	1/1:2,12:14:42.09:594,42,0	1/1:5,13:18:39.70:528,40,0	1/1:3,8:11:27.09:405,27,0	1/1:1,9:10:24.08:351,24,0	1/1:4,14:18:29.92:438,30,0	1/1:3,14:17:48.16:714,48,0	1/1:2,13:15:44.98:665,45,0	1/1:2,21:23:69.08:986,69,0	1/1:0,3:3:9.03:138,9,0
chr10	98120025	.	CACACACACACACAG	C	824.40	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=7.418;DP=594;FS=1.328;HRun=0;HaplotypeScore=198.5753;InbreedingCoeff=0.6295;MQ=60.56;MQ0=16;MQRankSum=-1.289;QD=4.18;ReadPosRankSum=-0.147;VQSLOD=2.7893;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:89.15:89,0,250	0/0:10,0:10:26.43:0,26,963	1/1:51,0:12:1.77:6,2,0	0/1:54,0:19:7.80:41,0,8	0/0:16,0:16:32.97:0,33,1099	0/0:20,0:20:39.02:0,39,1203	0/0:19,0:18:48.06:0,48,1669	1/1:16,0:15:29.96:256,30,0	0/0:22,0:21:47.29:0,47,1454	0/0:24,0:24:30.22:0,30,1959	0/0:15,0:14:35.34:0,35,1225	0/0:16,0:16:35.87:0,36,1476	0/0:18,0:18:18.45:0,18,866	0/0:21,0:21:43.06:0,43,1862	0/0:18,0:18:36.04:0,36,1518	1/1:4,12:16:6.02:242,6,0	0/0:38,0:38:84.44:0,84,2936	1/1:16,0:16:11.74:181,12,0	0/0:12,0:12:29.99:0,30,733	0/0:22,0:22:28.61:0,29,1333	0/0:31,0:31:57.14:0,57,2661	0/0:13,0:11:15.01:0,15,509	0/0:15,0:15:28.39:0,28,929	0/0:35,0:35:75.29:0,75,3578	0/0:17,0:17:29.98:0,30,1266	0/1:14,0:14:57.78:58,0,400	0/0:15,0:15:26.69:0,27,1074	1/1:5,0:5:14.96:119,15,0
chr10	98120033	.	CACACAG	C	1210.19	PASS	AB=0.854;AC=15;AF=0.268;AN=56;BaseQRankSum=9.389;DP=578;FS=17.368;HRun=0;HaplotypeScore=115.4452;InbreedingCoeff=0.6098;MQ=57.71;MQ0=17;MQRankSum=-1.365;QD=6.02;ReadPosRankSum=-4.511;VQSLOD=-0.5242;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:40.75:308,41,0	0/0:11,0:11:26.26:0,26,488	1/1:42,0:6:1.77:6,2,0	0/1:48,0:14:8.79:46,0,9	0/0:16,0:16:30.08:0,30,408	0/0:20,0:20:33.75:0,34,547	0/0:23,0:22:16.52:0,17,774	1/1:11,0:10:29.96:256,30,0	0/0:21,0:20:48.77:0,49,635	0/1:24,0:24:9.64:10,0,870	0/0:15,0:14:10.66:0,11,548	0/0:17,0:17:38.57:0,39,729	0/0:15,0:15:17.69:0,18,370	0/0:22,0:22:2.38:0,2,785	0/0:16,0:16:36.03:0,36,712	1/1:13,0:13:6.02:94,6,0	0/0:34,0:34:89.95:0,90,1373	1/1:14,0:14:29.78:218,30,0	0/0:10,0:10:2.97:0,3,271	0/0:20,0:20:28.70:0,29,670	0/0:36,0:35:13.07:0,13,1076	0/0:12,0:10:15:0,15,263	0/0:17,0:17:32.86:0,33,417	0/0:37,0:37:73.47:0,73,1641	0/0:18,0:18:13.93:0,14,584	0/1:4,14:18:51.30:330,0,51	0/0:17,0:17:35.09:0,35,591	1/1:5,0:5:14.96:119,15,0
chr10	98120039	.	GAC	G	84.80	PASS	AB=0.978;AC=13;AF=0.260;AN=50;BaseQRankSum=3.073;DP=568;FS=7.999;HRun=0;HaplotypeScore=82.2501;InbreedingCoeff=-0.0352;MQ=56.39;MQ0=20;MQRankSum=-0.746;QD=0.37;ReadPosRankSum=0.033;VQSLOD=0.9054;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:1.96:9,2,0	0/0:10,0:10:8.06:0,8,95	./.	0/0:47,0:12:0:0,0,0	0/1:15,1:16:51.78:52,0,53	0/0:19,0:19:17.65:0,18,232	0/0:24,0:23:33.14:0,33,381	0/0:16,0:14:7:0,7,33	0/1:19,2:20:12.17:12,0,177	0/1:21,0:21:14.02:14,0,98	0/0:14,0:13:2.58:0,3,117	0/0:15,0:14:21.04:0,21,280	0/0:16,0:15:6.02:0,6,80	0/0:22,0:22:19.80:0,20,338	0/0:15,0:15:14.72:0,15,179	1/1:12,0:12:5.60:27,6,0	0/1:34,0:35:40.84:41,0,410	./.	0/1:11,0:11:23.01:23,0,33	0/0:22,0:22:22.81:0,23,232	0/0:41,0:40:40.11:0,40,374	0/0:11,0:9:5.05:0,5,51	0/1:16,0:16:0.05:0,0,94	0/1:36,1:37:21.47:21,0,442	0/1:19,0:19:12.86:13,0,188	0/1:18,0:18:6.71:7,0,36	0/0:16,0:16:23.84:0,24,275	./.
chr10	98120782	.	TAG	T	4348.15	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=15.052;DP=714;FS=0.384;HRun=0;HaplotypeScore=92.5786;InbreedingCoeff=0.9583;MQ=83.55;MQ0=1;MQRankSum=-1.822;QD=33.97;ReadPosRankSum=1.830;VQSLOD=6.7022;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,34:38:90.30:1260,90,0	0/0:17,0:17:48.16:0,48,841	0/0:21,0:21:53.88:0,54,890	0/0:21,0:20:42.68:0,43,790	0/0:19,0:19:54.17:0,54,943	0/0:26,0:26:75.26:0,75,1335	0/0:32,0:32:96.33:0,96,1728	1/1:4,25:29:72.22:987,72,0	0/0:38,0:38:99:0,105,1848	0/0:33,0:33:90.30:0,90,1559	0/0:12,0:12:36.12:0,36,634	0/0:26,0:26:78.25:0,78,1360	0/0:31,0:31:84.27:0,84,1461	0/0:23,0:23:69.24:0,69,1242	0/0:39,0:39:99:0,117,2094	1/1:4,38:41:99:1386,99,0	0/0:37,0:37:99:0,111,1984	1/1:1,17:18:48.16:672,48,0	0/0:26,0:26:72.24:0,72,1269	0/0:26,0:26:78.27:0,78,1403	0/0:30,0:30:84.29:0,84,1513	0/0:15,0:15:42.14:0,42,756	0/0:21,0:21:54.17:0,54,931	0/0:24,0:24:72.25:0,72,1294	0/0:17,0:17:51.17:0,51,904	0/0:16,0:16:45.15:0,45,808	0/0:36,0:35:99:0,105,1834	1/1:0,1:1:3.01:42,3,0
chr10	98121376	.	GC	G	3712.86	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=15.628;DP=694;FS=0.381;HRun=2;HaplotypeScore=74.9496;InbreedingCoeff=0.9978;MQ=85.65;MQ0=0;MQRankSum=-2.388;QD=29.94;ReadPosRankSum=-2.516;VQSLOD=2.6731;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:94.16:1094,94,0	0/0:13,0:13:39.13:0,39,585	0/0:28,0:28:70.33:0,70,945	0/0:15,0:15:35.77:0,36,458	0/0:25,0:25:75.24:0,75,1101	0/0:27,0:27:81.27:0,81,1203	0/0:16,0:16:48.16:0,48,718	1/1:4,40:44:99:1373,122,0	0/0:18,0:18:51.17:0,51,763	0/0:27,0:27:81.27:0,81,1196	0/0:29,0:29:87.29:0,87,1303	0/0:18,0:18:51.16:0,51,745	0/0:21,0:21:63.21:0,63,943	0/0:17,0:17:51.17:0,51,763	0/0:27,0:27:81.26:0,81,1192	1/1:4,23:27:21.22:684,21,0	0/0:32,0:32:93.31:0,93,1390	1/1:0,7:7:21.06:241,21,0	0/0:23,0:23:60.20:0,60,896	0/0:42,0:42:99:0,126,1863	0/0:38,0:37:99:0,111,1659	0/0:18,0:18:54.18:0,54,808	0/0:34,0:34:99:0,102,1486	0/0:19,0:19:57.19:0,57,853	0/0:22,0:22:63.21:0,63,944	0/0:23,0:23:69.23:0,69,1034	0/0:38,0:38:99:0,114,1687	1/1:0,11:11:27.08:321,27,0
chr10	98122949	.	TGAAGTGGA	T	5268.81	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.575;DP=532;FS=0.000;HRun=0;HaplotypeScore=134.1025;InbreedingCoeff=0.9889;MQ=79.79;MQ0=0;MQRankSum=-11.036;QD=84.98;ReadPosRankSum=-1.834;VQSLOD=4.6731;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:36.08:1013,36,0	0/0:12,0:12:36.12:0,36,1675	0/0:15,0:15:45.15:0,45,1814	0/0:13,0:13:39.13:0,39,1627	0/0:22,0:22:66.20:0,66,2774	0/0:33,0:33:99:0,99,4484	0/0:22,0:22:66.23:0,66,2904	1/1:0,28:28:84.28:2354,84,0	0/0:20,0:20:60.21:0,60,2735	0/0:22,0:22:66.18:0,66,2744	0/0:19,0:19:57.20:0,57,2508	0/0:17,0:17:51.18:0,51,2360	0/0:20,0:20:60.21:0,60,2623	0/0:24,0:24:72.18:0,72,3124	0/0:24,0:24:69.24:0,69,3122	1/1:0,12:12:36.12:1089,36,0	0/0:25,0:25:75.26:0,75,3429	1/1:0,5:5:15.05:450,15,0	0/0:12,0:12:33.11:0,33,1529	0/0:20,0:20:57.20:0,57,2647	0/0:26,0:26:78.27:0,78,3466	0/0:19,0:19:57.20:0,57,2639	0/0:26,0:26:78.27:0,78,3622	0/0:13,0:13:39.12:0,39,1601	0/0:18,0:18:54.19:0,54,2462	0/0:23,0:23:69.24:0,69,3127	0/0:25,0:25:75.26:0,75,3375	1/1:0,4:4:12.04:363,12,0
chr10	98123045	.	CT	C	2166.09	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.416;DP=466;FS=5.055;HRun=7;HaplotypeScore=49.7481;InbreedingCoeff=0.9734;MQ=67.37;MQ0=0;MQRankSum=-2.448;QD=24.90;ReadPosRankSum=0.102;VQSLOD=3.8157;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:36.08:367,36,0	0/0:10,0:10:27.09:0,27,340	0/0:8,0:6:12.03:0,12,143	0/0:14,0:13:28.64:0,29,290	0/0:29,0:29:87.28:0,87,1094	0/0:30,0:30:87.27:0,87,1081	0/0:5,0:5:12.04:0,12,151	1/1:4,26:30:78.14:780,78,0	0/0:17,0:17:48.14:0,48,591	0/0:20,0:20:57.18:0,57,717	0/0:20,0:20:57.18:0,57,717	0/0:10,0:10:24.08:0,24,302	0/0:12,0:12:36.10:0,36,440	0/0:11,0:11:33.10:0,33,404	0/0:13,0:13:36.10:0,36,440	1/1:1,11:12:33.07:337,33,0	0/0:18,0:18:48.09:0,48,571	1/1:0,22:22:57.13:581,57,0	0/0:22,0:22:66.21:0,66,830	0/0:32,0:32:93.28:0,93,1157	0/0:9,0:9:24.08:0,24,302	0/0:6,0:6:15.04:0,15,175	0/0:15,0:15:39.12:0,39,491	0/0:5,0:5:12.04:0,12,151	0/0:21,0:21:60.19:0,60,755	0/0:22,0:22:54.16:0,54,667	0/0:30,0:29:84.03:0,84,1005	1/1:0,9:9:27.06:275,27,0
chr10	98123507	.	T	TATA	235.35	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.828;DP=639;FS=0.000;HRun=0;HaplotypeScore=97.6870;InbreedingCoeff=0.9838;MQ=83.34;MQ0=0;MQRankSum=-3.754;QD=39.23;ReadPosRankSum=0.028;VQSLOD=4.1415;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,105,1957	0/0:12,0:12:36.11:0,36,641	0/0:23,0:23:65.59:0,66,1118	0/0:16,0:16:42.10:0,42,720	0/0:27,0:27:81.28:0,81,1501	0/0:20,0:20:60.17:0,60,1029	0/0:21,0:20:60.16:0,60,1075	0/0:27,0:27:78.26:0,78,1418	0/0:19,0:19:54.19:0,54,1007	0/0:23,0:23:69.20:0,69,1251	0/0:22,0:22:66.22:0,66,1201	0/0:17,0:17:51.17:0,51,945	0/0:18,0:18:54.19:0,54,1007	0/0:19,0:19:57.20:0,57,1056	0/0:19,0:19:57.18:0,57,1024	0/0:16,0:16:48.12:0,48,852	0/0:36,0:36:99:0,102,1886	1/1:1,5:6:15.05:324,15,0	0/0:16,0:16:42.14:0,42,779	0/0:41,0:41:99:0,117,2174	0/0:41,0:41:99:0,117,2174	0/0:32,0:32:96.32:0,96,1752	0/0:19,0:19:54.19:0,54,1007	0/0:22,0:22:66.18:0,66,1193	0/0:16,0:16:48.16:0,48,866	0/0:32,0:32:96.32:0,96,1758	0/0:20,0:19:57.19:0,57,1034	0/0:20,0:20:52.73:0,53,946
chr10	98123513	.	TGGA	T	63.38	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.837;DP=630;FS=0.000;HRun=0;HaplotypeScore=93.6955;InbreedingCoeff=0.9835;MQ=84.22;MQ0=1;MQRankSum=-3.756;QD=10.56;ReadPosRankSum=0.205;VQSLOD=3.1677;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,2908	0/0:12,0:12:36.12:0,36,888	0/0:26,0:25:75.24:0,75,1724	0/0:16,0:16:48.16:0,48,1119	0/0:27,0:27:78.25:0,78,1849	0/0:18,0:18:54.19:0,54,1331	0/0:21,0:20:60.21:0,60,1468	0/0:29,0:29:84.28:0,84,2023	0/0:17,0:17:48.16:0,48,1183	0/0:25,0:25:75.26:0,75,1841	0/0:20,0:20:60.19:0,60,1408	0/0:16,0:16:48.16:0,48,1181	0/0:16,0:16:48.16:0,48,1183	0/0:20,0:20:54.19:0,54,1331	0/0:20,0:20:60.21:0,60,1477	0/0:15,0:15:42.14:0,42,1010	0/0:38,0:38:99:0,108,2472	1/1:1,5:6:15.02:152,15,0	0/0:13,0:13:33.11:0,33,810	0/0:36,0:36:99:0,108,2656	0/0:39,0:39:99:0,117,2720	0/0:33,0:33:99:0,99,2339	0/0:19,0:19:57.16:0,57,1281	0/0:22,0:22:66.23:0,66,1627	0/0:16,0:16:48.16:0,48,1183	0/0:28,0:28:84.29:0,84,2049	0/0:21,0:20:60.21:0,60,1473	0/0:18,0:18:48.16:0,48,1140
chr10	98123565	.	T	TCATCA	456.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.878;DP=451;FS=7.478;HRun=0;HaplotypeScore=100.1363;InbreedingCoeff=0.9346;MQ=70.71;MQ0=2;MQRankSum=-4.878;QD=50.76;ReadPosRankSum=0.346;VQSLOD=3.3714;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,102,2259	0/0:5,0:5:12.04:0,12,279	0/0:16,0:15:42.13:0,42,932	0/0:7,0:6:14.76:0,15,185	0/0:17,0:17:48.15:0,48,1069	0/0:15,0:15:45.13:0,45,958	0/0:19,0:19:51.14:0,51,1138	0/0:27,0:27:72.15:0,72,1496	0/0:11,0:11:33.11:0,33,768	0/0:17,0:17:51.18:0,51,1173	0/0:15,0:14:42.14:0,42,951	0/0:11,0:11:26.58:0,27,543	0/0:10,0:10:30.10:0,30,696	0/0:11,0:11:30.10:0,30,674	0/0:16,0:16:48.16:0,48,1097	0/0:8,0:8:15.01:0,15,273	0/0:31,0:31:87.20:0,87,1873	1/1:3,6:9:27.09:551,27,0	0/0:16,0:16:43.03:0,43,937	0/0:23,0:23:54.19:0,54,1256	0/0:17,0:17:48.15:0,48,1045	0/0:17,0:17:45.15:0,45,1048	0/0:10,0:10:30.10:0,30,664	0/0:10,0:10:23.89:0,24,558	0/0:18,0:18:42.14:0,42,935	0/0:22,0:22:62.52:0,63,1302	0/0:15,0:14:42.14:0,42,944	0/0:17,0:16:39.13:0,39,885
chr10	98123567	.	CT	C	446.17	PASS	AB=0.837;AC=7;AF=0.125;AN=56;BaseQRankSum=2.676;DP=470;FS=1.936;HRun=14;HaplotypeScore=63.0338;InbreedingCoeff=0.1781;MQ=69.07;MQ0=4;MQRankSum=0.649;QD=3.33;ReadPosRankSum=1.656;VQSLOD=-0.1006;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,25:42:9.71:350,10,0	0/0:5,0:5:9.48:0,9,85	0/0:15,1:15:13.11:0,13,90	0/0:7,0:6:2.04:0,2,7	0/0:15,2:17:28.27:0,28,253	0/0:13,1:14:6.40:0,6,194	0/0:18,1:19:12.37:0,12,240	0/1:14,11:25:29.34:143,0,29	0/0:14,0:14:15:0,15,134	0/1:16,2:18:11.15:11,0,187	0/0:13,0:14:32.70:0,33,276	0/0:9,0:13:5.41:0,5,100	0/0:10,0:10:15:0,15,132	0/0:14,0:14:17.90:0,18,142	0/0:17,0:18:23.11:0,23,234	0/0:2,0:8:2.84:0,3,14	0/0:32,3:35:4.97:0,5,421	0/0:7,0:7:18.73:0,19,90	0/0:14,0:15:18.43:0,18,192	0/1:20,1:23:1.86:2,0,138	0/0:15,0:16:26.15:0,26,224	0/0:17,1:18:12.39:0,12,243	0/1:9,0:9:2.26:2,0,114	0/0:12,0:12:21.31:0,21,190	0/0:17,1:18:9.44:0,9,225	0/0:19,0:24:25.82:0,26,192	0/0:19,0:17:29.92:0,30,254	0/1:10,6:16:5.69:54,0,6
chr10	98123608	.	CT	C	180.91	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=3.389;DP=316;FS=0.000;HRun=2;HaplotypeScore=43.2643;InbreedingCoeff=0.7183;MQ=43.92;MQ0=4;MQRankSum=-1.213;QD=15.08;ReadPosRankSum=1.836;VQSLOD=3.2046;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:38.98:0,39,469	0/0:7,0:7:14.96:0,15,156	./.	./.	0/0:9,0:9:14.91:0,15,130	0/0:7,0:7:11.99:0,12,136	0/0:19,0:17:42.09:0,42,576	0/0:23,0:23:21.02:0,21,270	0/0:13,0:13:29.96:0,30,357	0/0:7,0:7:15.02:0,15,201	0/0:11,0:11:19.21:0,19,204	0/0:11,0:11:24:0,24,309	0/0:10,0:10:23.99:0,24,285	0/0:11,0:11:29.93:0,30,349	0/0:18,0:18:50.97:0,51,606	0/0:5,0:5:9.02:0,9,117	0/0:28,0:26:57.20:0,57,713	1/1:4,8:11:21.07:272,21,0	0/0:12,0:12:32.70:0,33,411	0/0:10,0:10:14.83:0,15,125	0/0:11,0:10:17.43:0,17,268	0/0:9,0:9:20.93:0,21,221	0/0:9,0:9:21.01:0,21,268	0/0:9,0:9:17.92:0,18,249	0/0:10,0:10:20.93:0,21,219	0/0:10,0:10:26.96:0,27,318	0/0:14,0:13:36.01:0,36,430	0/0:7,0:6:2.98:0,3,21
chr10	98123763	.	CT	C	1348.06	PASS	AB=0.923;AC=11;AF=0.196;AN=56;BaseQRankSum=4.782;DP=588;FS=5.673;HRun=13;HaplotypeScore=65.9526;InbreedingCoeff=0.5394;MQ=68.59;MQ0=0;MQRankSum=-0.662;QD=8.37;ReadPosRankSum=2.574;VQSLOD=2.7797;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,31:36:43.92:456,44,0	0/0:13,0:13:24.04:0,24,234	0/1:19,1:17:25.88:26,0,92	0/1:8,1:8:17.58:28,0,18	0/0:26,3:29:1.27:0,1,326	0/0:18,0:18:23.17:0,23,380	0/0:17,2:19:1.25:0,1,335	1/1:11,21:32:56.62:416,57,0	0/0:13,1:14:5.07:0,5,195	0/0:27,0:27:51.05:0,51,481	0/0:15,1:17:19.97:0,20,332	0/0:13,0:16:32.82:0,33,287	0/0:21,2:24:28.96:0,29,403	0/0:14,0:14:30.02:0,30,279	0/0:23,0:23:57.07:0,57,542	1/1:4,15:19:35.65:263,36,0	0/0:29,0:29:72.01:0,72,670	0/0:18,1:19:29.13:0,29,428	0/0:16,0:16:33.05:0,33,321	0/1:20,2:22:1.76:2,0,304	0/0:13,0:16:41.72:0,42,371	0/0:25,3:29:0.20:0,0,470	0/0:15,1:17:4.97:0,5,197	0/0:17,0:19:47.75:0,48,437	0/0:23,0:24:53.91:0,54,503	0/0:5,0:22:49.45:0,49,310	0/0:20,2:22:14.15:0,14,299	1/1:2,21:23:21.51:321,22,0
chr10	98124183	.	GCCTC	G	3025.38	PASS	AB=0.529;AC=5;AF=0.089;AN=56;BaseQRankSum=11.278;DP=732;FS=2.317;HRun=0;HaplotypeScore=133.9619;InbreedingCoeff=0.7803;MQ=87.60;MQ0=0;MQRankSum=-8.593;QD=44.49;ReadPosRankSum=1.838;VQSLOD=4.4566;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,3423	0/0:15,0:15:39.13:0,39,1040	0/0:27,0:27:69.24:0,69,1780	0/0:27,0:27:72.21:0,72,1704	0/0:30,0:30:90.31:0,90,2341	0/0:19,0:18:57.20:0,57,1491	0/0:30,0:30:81.28:0,81,2161	0/0:22,0:22:63.22:0,63,1651	0/0:29,0:29:84.29:0,84,2193	0/0:27,0:27:81.28:0,81,2091	0/0:13,0:13:39.13:0,39,1040	0/0:24,0:24:72.25:0,72,1862	0/0:28,0:28:81.28:0,81,2140	0/0:19,0:19:51.18:0,51,1360	0/0:35,0:35:99:0,102,2693	1/1:2,29:31:87.30:1621,87,0	0/0:43,0:43:99:0,120,3198	1/1:5,14:19:39.13:727,39,0	0/0:19,0:19:51.17:0,51,1276	0/0:21,0:21:63.22:0,63,1675	0/0:50,0:50:99:0,150,3873	0/0:27,0:27:78.26:0,78,2020	0/0:18,0:18:48.15:0,48,1197	0/0:25,0:25:72.25:0,72,1908	0/0:24,0:24:72.25:0,72,1900	0/1:2,16:18:28.93:807,0,29	0/0:35,0:35:99:0,105,2729	0/0:10,0:10:27.09:0,27,697
chr10	98124521	.	TG	T	928.88	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=11.009;DP=695;FS=12.906;HRun=5;HaplotypeScore=71.8317;InbreedingCoeff=0.5721;MQ=60.71;MQ0=28;MQRankSum=-7.038;QD=9.78;ReadPosRankSum=0.058;VQSLOD=0.3758;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:19.53:20,0,124	0/0:10,0:10:24.08:0,24,324	0/0:99,0:22:36.16:0,36,299	0/0:104,0:14:28.19:0,28,191	0/0:27,0:27:75.15:0,75,914	0/0:19,0:19:54.17:0,54,710	0/0:7,0:7:21.04:0,21,251	1/1:11,24:36:84.64:849,85,0	0/0:14,0:14:35.17:0,35,411	0/0:28,0:27:78.21:0,78,964	0/0:35,0:35:99:0,102,1193	0/0:18,0:17:48.08:0,48,595	0/0:9,0:9:27.07:0,27,333	0/0:13,0:13:39.12:0,39,512	0/0:12,0:12:30.03:0,30,316	0/0:14,0:14:2.87:0,3,68	0/0:21,0:21:60.15:0,60,773	0/1:25,0:25:34.63:35,0,52	0/0:15,0:15:35.12:0,35,409	0/0:27,0:27:66.14:0,66,791	0/0:18,0:18:45.09:0,45,543	0/0:24,0:24:66.13:0,66,776	0/0:17,0:17:42.10:0,42,519	0/0:5,0:5:15.03:0,15,185	0/0:16,0:16:42.14:0,42,567	0/0:26,0:25:30.43:0,30,206	0/0:21,0:20:60.10:0,60,711	1/1:1,4:5:15.04:160,15,0
chr10	98124526	.	GT	G	1483.32	PASS	AB=0.969;AC=13;AF=0.232;AN=56;BaseQRankSum=11.871;DP=676;FS=1.919;HRun=9;HaplotypeScore=67.6969;InbreedingCoeff=0.8634;MQ=56.07;MQ0=29;MQRankSum=-3.126;QD=6.53;ReadPosRankSum=0.382;VQSLOD=1.0667;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,22:29:28.13:444,28,0	0/0:8,0:8:24.07:0,24,278	0/1:92,1:18:14.65:15,0,112	0/0:104,1:13:8.60:0,9,105	0/0:25,0:25:72.20:0,72,822	0/0:19,0:18:54.14:0,54,614	0/0:7,0:7:21.05:0,21,233	1/1:34,0:34:31.34:216,31,0	0/0:16,1:17:17.66:0,18,417	0/0:28,0:27:74.42:0,74,825	0/0:33,0:34:93.13:0,93,1045	0/0:17,0:16:45.13:0,45,520	0/0:11,0:11:30.07:0,30,328	0/0:13,0:13:36.11:0,36,416	0/0:9,0:10:26.95:0,27,292	1/1:3,11:14:18.01:165,18,0	0/0:24,0:24:63.12:0,63,686	1/1:4,20:25:31.67:405,32,0	0/0:13,1:14:8.41:0,8,323	0/0:24,0:24:26.74:0,27,562	0/0:15,0:15:39.12:0,39,451	0/0:22,0:22:57.16:0,57,650	0/0:15,0:15:36.11:0,36,417	0/0:5,0:5:15.04:0,15,174	0/0:15,0:15:42.12:0,42,486	1/1:25,0:24:65.52:393,66,0	0/0:21,0:20:51.14:0,51,576	1/1:5,0:5:10.67:32,11,0
chr10	98125311	.	G	GT	284.14	PASS	AB=0.946;AC=5;AF=0.132;AN=38;BaseQRankSum=2.477;DP=90;FS=7.914;HRun=0;HaplotypeScore=31.6006;InbreedingCoeff=-0.0770;MQ=117.15;MQ0=2;MQRankSum=0.074;QD=5.92;ReadPosRankSum=0.019;VQSLOD=1.5352;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:1,0:1:3.01:0,3,42	0/1:13,2:11:99:100,0,112	0/1:21,1:19:99:167,0,151	0/0:2,0:2:6.02:0,6,84	0/0:1,0:1:2.99:0,3,24	0/0:4,0:4:9:0,9,91	1/1:7,0:7:6.66:84,7,0	0/0:2,0:1:3.01:0,3,42	0/0:1,0:1:3:0,3,27	./.	0/0:3,0:3:3.01:0,3,42	./.	./.	0/0:1,0:1:3.01:0,3,42	./.	0/0:1,0:1:3.01:0,3,39	0/0:2,0:2:2.98:0,3,21	0/1:4,0:4:33.24:33,0,34	./.	0/0:11,1:12:5.75:0,6,68	./.	./.	0/0:2,0:2:3:0,3,42	0/0:3,0:3:9.01:0,9,107	0/0:1,0:1:3.01:0,3,42	0/0:2,0:2:3.01:0,3,42	./.
chr10	98126181	.	GT	G	73.48	PASS	AC=6;AF=0.120;AN=50;BaseQRankSum=4.680;DP=179;FS=1.632;HRun=1;HaplotypeScore=39.1886;InbreedingCoeff=0.4545;MQ=56.27;MQ0=4;MQRankSum=-4.283;QD=3.50;ReadPosRankSum=0.083;VQSLOD=-0.0802;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,4:8:2.06:66,2,0	0/0:3,0:3:9.02:0,9,113	0/0:19,1:9:0.79:0,1,272	0/0:28,0:12:25.20:0,25,236	0/0:3,0:3:3.01:0,3,46	0/0:7,0:7:18.06:0,18,277	0/0:6,0:5:12.04:0,12,169	1/1:4,3:7:11.40:71,11,0	0/0:4,0:4:7.65:0,8,122	0/0:3,0:3:9.03:0,9,131	0/0:2,0:2:6.02:0,6,82	0/0:2,0:2:3.01:0,3,45	0/0:2,0:2:3.01:0,3,47	0/0:3,0:3:9.03:0,9,134	0/0:3,0:3:6.01:0,6,66	0/0:1,0:1:0.89:0,1,2	0/0:4,0:3:5.99:0,6,69	0/0:9,1:9:26.55:0,27,283	0/0:8,0:6:18.04:0,18,245	./.	0/0:36,0:30:40.71:0,41,713	./.	0/0:1,0:1:3.01:0,3,37	0/0:4,0:4:6.70:0,7,128	0/0:6,0:6:15.05:0,15,228	1/1:2,2:4:10.05:51,10,0	0/0:2,0:2:6.01:0,6,65	./.
chr10	98127648	.	GTA	G	127.97	PASS	AB=0.689;AC=6;AF=0.107;AN=56;BaseQRankSum=8.434;DP=796;FS=1.924;HRun=0;HaplotypeScore=141.5146;InbreedingCoeff=0.5096;MQ=54.98;MQ0=28;MQRankSum=-3.573;QD=1.47;ReadPosRankSum=-0.524;VQSLOD=2.0663;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,11:23:2.74:25,3,0	0/0:10,0:9:8.70:0,9,233	0/0:25,0:13:8.54:0,9,196	0/0:33,0:20:20.34:0,20,222	0/0:23,0:22:38.90:0,39,462	0/0:29,0:27:55.03:0,55,880	0/0:32,0:28:39.66:0,40,686	1/1:42,0:35:4.36:21,4,0	0/0:21,0:21:54.26:0,54,711	0/0:28,0:27:73.54:0,74,847	0/0:25,0:24:38.38:0,38,545	0/0:28,0:27:65.50:0,66,866	0/0:28,0:26:62.53:0,63,818	0/0:28,0:27:58.81:0,59,826	0/0:37,0:37:60.05:0,60,891	0/0:25,0:25:50.22:0,50,409	0/0:27,0:27:15.09:0,15,667	0/1:10,4:14:9.60:83,0,10	0/0:26,0:22:27.51:0,28,439	0/0:20,0:19:40.75:0,41,607	0/0:84,0:78:90.34:0,90,1622	0/0:29,0:28:68.01:0,68,802	0/0:23,0:20:47.94:0,48,483	0/0:44,0:42:66.25:0,66,1088	0/0:26,1:26:39.36:0,39,687	0/0:38,0:34:90.52:0,91,714	0/0:19,0:19:39.73:0,40,609	0/1:2,4:6:6.23:114,0,6
chr10	98127650	.	ATG	A	409.32	PASS	AB=0.965;AC=21;AF=0.404;AN=52;BaseQRankSum=5.478;DP=790;FS=6.352;HRun=0;HaplotypeScore=137.8187;InbreedingCoeff=-0.1587;MQ=54.45;MQ0=33;MQRankSum=-0.076;QD=0.86;ReadPosRankSum=1.010;VQSLOD=2.1785;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:22:3:26,3,0	0/1:8,2:9:12.89:13,0,221	./.	./.	0/1:22,1:22:20.47:20,0,127	0/0:28,1:27:6.48:0,6,510	0/1:32,0:28:31.63:32,0,407	1/1:42,0:34:0.24:4,0,0	0/0:23,0:22:20.38:0,20,393	0/0:30,0:28:25.32:0,25,339	0/1:24,1:24:36.39:36,0,281	0/0:28,0:27:2.45:0,2,424	0/1:27,1:26:3:3,0,387	0/0:26,1:26:2.21:0,2,444	0/1:34,3:37:72.55:73,0,370	0/1:24,0:24:6.33:6,0,32	0/1:26,1:27:26.17:26,0,445	0/1:15,0:14:22.46:83,0,22	0/0:26,0:22:14.92:0,15,170	0/1:18,0:17:4.22:4,0,327	0/1:80,1:75:60.17:60,0,851	0/0:26,1:26:19.15:0,19,407	0/0:23,0:20:12.04:0,12,167	0/0:44,0:42:31.20:0,31,813	0/1:27,0:26:21.33:21,0,394	1/1:38,0:33:3.45:17,3,0	0/1:18,1:19:6.84:7,0,311	1/1:6,0:6:10.29:126,10,0
chr10	98127758	.	GGT	G	240.06	PASS	AB=0.959;AC=13;AF=0.241;AN=54;BaseQRankSum=2.407;DP=861;FS=0.800;HRun=0;HaplotypeScore=126.1130;InbreedingCoeff=-0.1456;MQ=54.05;MQ0=51;MQRankSum=0.302;QD=0.73;ReadPosRankSum=0.446;VQSLOD=2.5234;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:28:26.65:0,27,211	0/0:15,0:15:17.58:0,18,259	0/0:91,0:13:0:0,0,0	./.	0/1:18,0:18:6.58:7,0,255	0/1:20,0:20:32.36:32,0,99	0/0:33,1:32:5.82:0,6,470	0/1:42,0:38:23.51:24,0,76	0/1:19,0:19:30.49:30,0,205	0/1:30,0:30:27.94:28,0,357	0/0:15,0:14:9.61:0,10,166	0/1:28,0:27:38.95:39,0,410	0/0:20,2:21:2.80:0,3,406	0/0:30,0:28:29.96:0,30,378	0/0:23,0:21:9.58:0,10,386	0/0:9,0:18:7.96:0,8,44	0/1:32,3:34:40.55:41,0,561	0/0:10,0:27:35.93:0,36,301	0/1:16,1:12:18.23:18,0,133	0/0:17,0:17:11.71:0,12,142	0/1:68,1:68:18.62:19,0,484	0/1:17,1:16:12.23:12,0,211	0/0:21,1:22:2.78:0,3,393	0/0:35,1:35:21.48:0,21,598	0/1:16,2:17:15.30:15,0,188	0/0:19,0:32:50.18:0,50,418	0/0:18,0:18:26.98:0,27,363	1/1:7,1:8:14.81:124,15,0
chr10	98128648	.	T	TACA	2335.69	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.963;DP=640;FS=10.725;HRun=0;HaplotypeScore=88.3936;InbreedingCoeff=0.9958;MQ=95.52;MQ0=0;MQRankSum=-5.848;QD=59.89;ReadPosRankSum=-2.485;VQSLOD=4.3357;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.14:0,54,970	0/0:7,0:7:21.07:0,21,379	0/0:31,0:31:87.25:0,87,1509	0/0:29,0:29:84.25:0,84,1482	0/0:38,0:38:99:0,114,2114	0/0:23,0:23:66.22:0,66,1166	0/0:22,0:22:66.22:0,66,1201	1/1:8,16:25:69.22:1518,69,0	0/0:20,0:20:60.21:0,60,1115	0/0:30,0:31:90.31:0,90,1672	0/0:23,0:23:66.21:0,66,1174	0/0:18,0:18:54.19:0,54,1007	0/0:21,0:21:63.22:0,63,1175	0/0:16,0:16:45.15:0,45,828	0/0:31,0:31:93.32:0,93,1722	0/0:19,0:19:48.16:0,48,870	0/0:25,0:25:75.18:0,75,1329	0/0:7,0:7:21.07:0,21,392	0/0:16,0:16:48.16:0,48,864	0/0:39,0:39:99:0,117,2110	0/0:20,0:20:60.21:0,60,1119	0/0:34,0:34:99:0,102,1817	0/0:14,0:14:39.13:0,39,727	0/0:20,0:20:60.19:0,60,1089	0/0:25,0:25:75.26:0,75,1387	0/0:29,0:29:87.29:0,87,1582	0/0:24,0:23:72.25:0,72,1336	1/1:1,13:14:39.13:939,39,0
chr10	98128737	.	C	CCT	2862.34	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.909;DP=570;FS=2.807;HRun=0;HaplotypeScore=90.1116;InbreedingCoeff=0.9480;MQ=73.13;MQ0=0;MQRankSum=-6.283;QD=30.45;ReadPosRankSum=0.465;VQSLOD=5.4996;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:30.10:530,30,0	0/0:7,0:7:21.07:0,21,316	0/0:30,0:30:79.84:0,80,1052	0/0:22,0:23:32.90:0,33,622	0/0:32,0:32:87.23:0,87,1209	0/0:22,0:22:63.20:0,63,930	0/0:24,0:24:72.22:0,72,1044	1/1:19,0:19:0.73:257,1,0	0/0:16,0:16:48.14:0,48,687	0/0:23,0:23:66.19:0,66,910	0/0:17,0:17:45.10:0,45,652	0/0:23,0:23:65.22:0,65,887	0/0:16,0:16:48.15:0,48,700	0/0:19,0:19:57.18:0,57,837	0/0:19,0:19:54.11:0,54,732	1/1:2,17:19:35.61:707,36,0	0/0:28,0:28:81.25:0,81,1195	1/1:0,8:9:21.07:371,21,0	0/0:13,0:13:33.03:0,33,414	0/0:27,0:27:75.24:0,75,1103	0/0:26,0:26:75.22:0,75,1064	0/0:26,0:26:69.12:0,69,933	0/0:17,0:17:48.16:0,48,724	0/0:21,0:21:43.87:0,44,792	0/0:23,0:23:69.19:0,69,976	1/1:2,14:16:47.73:772,48,0	0/0:24,0:24:69.21:0,69,992	1/1:13,0:13:36.10:404,36,0
chr10	98128738	.	C	CT	1179.54	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.366;DP=561;FS=1.612;HRun=0;HaplotypeScore=80.7032;InbreedingCoeff=0.9756;MQ=73.55;MQ0=0;MQRankSum=-5.552;QD=14.04;ReadPosRankSum=1.299;VQSLOD=5.0839;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:25.90:137,26,0	0/0:7,0:7:21.07:0,21,293	0/0:29,0:29:85.39:0,85,1063	0/0:24,0:24:27.46:0,27,589	0/0:31,0:31:93.22:0,93,1200	0/0:24,0:24:66.20:0,66,890	0/0:24,0:24:72.22:0,72,971	1/1:7,6:13:13.89:274,14,0	0/0:16,0:16:48.14:0,48,640	0/0:23,0:23:66.15:0,66,842	0/0:17,0:17:47.89:0,48,618	0/0:23,0:23:65.40:0,65,834	0/0:16,0:16:48.15:0,48,647	0/0:19,0:19:57.18:0,57,781	0/0:20,0:20:57.11:0,57,711	1/1:19,0:19:7.41:162,7,0	0/0:28,0:28:81.24:0,81,1106	1/1:9,0:9:19.77:100,20,0	0/0:13,0:13:33.04:0,33,393	0/0:26,0:26:75.24:0,75,1020	0/0:26,0:26:78.21:0,78,1009	0/0:26,0:26:75.18:0,75,946	0/0:16,0:16:48.16:0,48,668	0/0:22,0:22:52.19:0,52,734	0/0:23,0:23:69.19:0,69,912	1/1:15,0:15:19.85:200,20,0	0/0:24,0:24:72.20:0,72,948	1/1:1,11:12:33.11:487,33,0
chr10	98128739	.	CCA	C	100.18	PASS	AB=0.958;AC=11;AF=0.196;AN=56;BaseQRankSum=10.586;DP=566;FS=1.302;HRun=0;HaplotypeScore=94.9791;InbreedingCoeff=0.6688;MQ=74.15;MQ0=0;MQRankSum=-0.677;QD=0.89;ReadPosRankSum=1.308;VQSLOD=1.2513;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:8.67:22,9,0	0/0:7,0:7:18.06:0,18,297	0/0:30,0:30:40.55:0,41,823	0/0:24,0:24:37.06:0,37,544	0/0:29,2:31:26.53:0,27,1144	0/0:25,0:25:75.18:0,75,1107	0/0:23,0:23:63.18:0,63,984	1/1:14,0:14:4.82:41,5,0	0/0:16,0:16:48.16:0,48,761	0/0:23,0:23:60.19:0,60,945	0/0:17,0:17:36.12:0,36,583	0/0:24,0:24:69.07:0,69,976	0/0:15,1:16:4.30:0,4,574	0/0:19,0:19:45.14:0,45,717	0/0:21,0:21:54.13:0,54,785	1/1:18,0:19:13.17:83,13,0	0/0:28,0:28:81.21:0,81,1280	0/1:9,0:9:3.05:3,0,5	0/0:14,0:14:30.08:0,30,442	0/0:26,0:26:63.21:0,63,1032	0/1:24,2:26:9.43:9,0,872	0/0:26,0:26:66.17:0,66,980	0/0:16,0:16:48.14:0,48,762	0/0:22,0:22:59.78:0,60,886	0/0:21,0:21:54.18:0,54,880	0/1:16,0:17:4.63:48,0,5	0/0:23,1:24:22.33:0,22,862	1/1:12,0:12:18.64:48,19,0
chr10	98128740	.	CACACA	C	402.04	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=7.009;DP=565;FS=0.718;HRun=0;HaplotypeScore=128.2099;InbreedingCoeff=0.6661;MQ=72.73;MQ0=0;MQRankSum=-3.971;QD=6.70;ReadPosRankSum=-2.341;VQSLOD=1.9650;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:7.07:0,7,223	0/0:7,0:7:21.07:0,21,604	0/0:29,0:30:90.18:0,90,2237	0/0:22,0:22:45.10:0,45,1301	0/0:31,0:31:90.29:0,90,2618	0/0:27,0:27:81.28:0,81,2455	0/0:22,0:22:66.22:0,66,2030	1/1:7,6:13:23.45:284,23,0	0/0:17,0:17:51.18:0,51,1574	0/0:22,0:22:66.22:0,66,1925	0/0:17,0:17:42.13:0,42,1238	0/0:25,0:25:72.25:0,72,2179	0/0:16,0:16:48.14:0,48,1359	0/0:20,0:20:60.20:0,60,1710	0/0:20,0:20:57.19:0,57,1733	0/1:18,0:18:4.73:5,0,326	0/0:30,0:30:84.29:0,84,2619	0/0:9,0:9:19.57:0,20,179	0/0:12,0:12:33.11:0,33,942	0/0:27,0:27:75.24:0,75,2213	0/0:25,0:25:72.23:0,72,2021	0/0:26,0:26:72.23:0,72,2151	0/0:16,0:16:48.16:0,48,1516	0/0:21,0:21:59.94:0,60,1836	0/0:21,0:21:60.18:0,60,1767	0/1:17,0:17:5.31:5,0,379	0/0:25,0:25:75.24:0,75,2098	1/1:12,0:12:32.72:235,33,0
chr10	98130232	.	G	GC	7439.88	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=17.885;DP=756;FS=1.803;HRun=0;HaplotypeScore=86.7986;InbreedingCoeff=1.0000;MQ=87.11;MQ0=0;MQRankSum=-3.669;QD=41.33;ReadPosRankSum=1.280;VQSLOD=5.4237;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,43:44:99:1710,114,0	0/0:18,0:18:54.15:0,54,718	0/0:34,0:35:94.83:0,95,1264	0/0:30,0:30:86.91:0,87,1129	0/0:37,0:37:99:0,108,1474	0/0:18,0:18:54.17:0,54,730	0/0:21,0:21:63.21:0,63,877	1/1:1,30:31:90.22:1210,90,0	0/0:16,0:16:48.16:0,48,670	0/0:24,0:24:72.22:0,72,966	0/0:25,0:25:72.22:0,72,987	0/0:26,0:26:78.26:0,78,1089	0/0:33,0:33:96.26:0,96,1300	0/0:26,0:26:75.25:0,75,1048	0/0:27,0:27:78.26:0,78,1090	1/1:0,26:26:75.25:1118,75,0	0/0:27,0:27:81.24:0,81,1096	1/1:0,30:30:84.28:1258,84,0	0/0:21,0:21:60.19:0,60,818	0/0:27,0:27:81.24:0,81,1098	0/0:27,0:27:78.15:0,78,1044	0/0:31,0:31:87.24:0,87,1177	0/0:26,0:26:75.21:0,75,1026	0/0:22,0:22:63.18:0,63,840	0/0:25,0:25:75.20:0,75,981	1/1:0,28:28:81.27:1206,81,0	0/0:34,0:34:99:0,102,1425	1/1:0,21:21:63.21:937,63,0
chr10	98131741	.	AC	A	4943.82	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.486;DP=755;FS=12.343;HRun=4;HaplotypeScore=77.8822;InbreedingCoeff=0.9962;MQ=85.22;MQ0=0;MQRankSum=-3.857;QD=32.53;ReadPosRankSum=0.284;VQSLOD=4.3836;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,37:41:99:1255,105,0	0/0:6,0:6:18.06:0,18,252	0/0:30,0:30:81.25:0,81,1099	0/0:23,0:22:60.15:0,60,808	0/0:20,0:20:60.18:0,60,814	0/0:17,0:17:48.16:0,48,672	0/0:32,0:32:90.29:0,90,1242	1/1:0,27:27:78.22:916,78,0	0/0:38,0:38:99:0,111,1537	0/0:27,0:27:75.24:0,75,1036	0/0:8,0:8:24.07:0,24,319	0/0:33,0:33:99:0,99,1386	0/0:31,0:30:90.28:0,90,1240	0/0:35,0:35:99:0,102,1391	0/0:35,0:35:99:0,99,1367	1/1:0,30:30:87.27:1044,87,0	0/0:35,0:35:99:0,99,1386	1/1:1,22:23:60.18:720,60,0	0/0:32,0:32:90.28:0,90,1226	0/0:22,0:22:63.21:0,63,881	0/0:62,0:62:99:0,166,2260	0/0:28,0:28:81.27:0,81,1132	0/0:11,0:11:33.11:0,33,460	0/0:40,0:40:90.30:0,90,1258	0/0:18,0:18:54.18:0,54,756	1/1:2,23:25:33.17:793,33,0	0/0:20,0:20:60.20:0,60,840	1/1:0,6:6:18.06:216,18,0
chr10	98131808	.	CTG	C	339.66	PASS	AB=0.921;AC=13;AF=0.283;AN=46;BaseQRankSum=4.646;DP=651;FS=1.847;HRun=0;HaplotypeScore=90.9000;InbreedingCoeff=-0.1145;MQ=62.42;MQ0=13;MQRankSum=3.067;QD=1.25;ReadPosRankSum=1.098;VQSLOD=1.7549;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:2.04:0,2,6	./.	./.	./.	0/1:20,0:19:17.29:17,0,161	0/0:19,0:19:15.94:0,16,354	0/0:15,1:15:6.02:0,6,89	0/0:26,0:25:18.06:0,18,226	0/0:18,0:19:0.73:0,1,162	0/1:23,2:25:17.48:17,0,103	0/0:11,0:11:6:0,6,68	0/0:19,0:19:0.90:0,1,121	1/1:14,6:22:17.88:177,18,0	0/0:25,0:30:11.73:0,12,88	0/1:23,5:28:43.97:44,0,202	0/0:24,0:21:8.51:0,9,103	0/1:40,3:43:54.49:54,0,588	0/1:16,1:17:5.51:6,0,213	0/1:31,0:29:20.45:20,0,95	0/0:12,0:12:3.01:0,3,45	0/0:60,0:60:32.85:0,33,413	./.	1/1:9,1:10:3.01:33,3,0	0/1:30,6:36:77.73:78,0,507	0/1:19,2:21:8.47:8,0,284	0/0:20,0:20:22.88:0,23,248	0/1:16,3:19:20.48:20,0,122	./.
chr10	98131852	.	GTCCATC	G	726.02	PASS	AB=0.965;AC=7;AF=0.125;AN=56;BaseQRankSum=4.886;DP=635;FS=10.765;HRun=0;HaplotypeScore=130.6282;InbreedingCoeff=0.0931;MQ=49.46;MQ0=38;MQRankSum=-5.859;QD=5.38;ReadPosRankSum=-2.740;VQSLOD=0.7988;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:26:8.83:157,9,0	0/0:7,0:7:9.03:0,9,293	0/0:23,0:3:9:0,9,174	0/0:31,0:4:3.16:0,3,289	0/0:18,0:17:45.15:0,45,1294	0/0:23,0:23:60.16:0,60,1731	0/0:26,0:25:61.36:0,61,1672	0/1:21,0:19:28.87:29,0,309	0/0:24,0:23:60.06:0,60,1670	0/0:17,0:16:11.66:0,12,1079	0/0:15,0:14:33.05:0,33,994	0/0:21,0:21:39.60:0,40,1134	0/0:24,0:22:53.70:0,54,1233	0/1:17,0:14:37.14:37,0,793	0/0:27,0:26:48.15:0,48,1309	0/1:25,2:24:24.30:30,0,24	0/0:42,0:42:99:0,110,2997	0/1:18,0:17:96.40:96,0,264	0/0:16,0:15:44.96:0,45,719	0/0:11,0:10:26.76:0,27,754	0/0:63,0:61:99:0,120,3473	0/0:10,0:10:12.04:0,12,366	0/0:6,0:6:9.03:0,9,220	0/0:48,0:48:74.11:0,74,2804	0/0:25,0:25:60.01:0,60,1742	0/1:22,3:24:99:507,0,277	0/0:19,0:18:31.37:0,31,1023	0/0:3,0:3:2.97:0,3,20
chr10	98131856	.	ATCTGTCTG	A	1103.95	PASS	AB=0.710;AC=9;AF=0.161;AN=56;BaseQRankSum=7.246;DP=598;FS=1.583;HRun=0;HaplotypeScore=140.1217;InbreedingCoeff=0.7050;MQ=51.36;MQ0=37;MQRankSum=-4.566;QD=13.63;ReadPosRankSum=-2.932;VQSLOD=1.8234;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,15:23:12.04:227,12,0	0/0:7,0:7:9.03:0,9,341	0/0:23,0:3:9.03:0,9,255	0/0:32,0:5:9.92:0,10,376	0/0:16,0:15:36.12:0,36,1481	0/0:22,0:22:45.15:0,45,1751	0/0:25,0:25:48.16:0,48,1871	1/1:10,8:16:24.02:312,24,0	0/0:27,0:26:59.94:0,60,2182	0/0:14,0:13:36.12:0,36,1482	0/0:17,0:16:39.08:0,39,1517	0/0:17,0:17:36.12:0,36,1413	0/0:24,0:22:38.92:0,39,1457	0/0:17,0:14:27.09:0,27,1047	0/0:24,0:23:32.77:0,33,1243	0/0:9,0:16:2.21:0,2,32	0/0:39,0:39:81.28:0,81,3097	1/1:11,4:14:15.05:366,15,0	0/0:18,0:17:15.04:0,15,401	0/0:12,0:11:30.57:0,31,1016	0/0:59,0:58:99:0,106,4271	0/0:8,0:8:12.04:0,12,486	0/0:5,0:5:9.03:0,9,333	0/0:48,0:48:50.25:0,50,2948	0/0:24,0:24:51.18:0,51,1995	0/1:13,0:21:99:308,0,115	0/0:19,0:18:43.69:0,44,1396	1/1:1,1:2:3.01:41,3,0
chr10	98133671	.	C	CA	6349.15	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.912;DP=683;FS=15.261;HRun=0;HaplotypeScore=74.8064;InbreedingCoeff=0.9996;MQ=87.57;MQ0=0;MQRankSum=-1.941;QD=39.44;ReadPosRankSum=-0.058;VQSLOD=3.4050;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,47:47:99:1810,120,0	0/0:14,0:14:42.14:0,42,584	0/0:25,0:25:72.17:0,72,910	0/0:23,0:23:56.03:0,56,745	0/0:30,0:30:87.26:0,87,1174	0/0:19,0:19:57.19:0,57,796	0/0:15,0:15:45.10:0,45,560	1/1:1,32:33:96.26:1360,96,0	0/0:22,0:22:66.19:0,66,888	0/0:42,0:42:99:0,123,1660	0/0:9,0:9:27.09:0,27,377	0/0:32,0:32:90.29:0,90,1237	0/0:30,0:30:87.21:0,87,1159	0/0:28,0:28:84.25:0,84,1138	0/0:24,0:24:69.17:0,69,895	1/1:0,20:20:54.18:811,54,0	0/0:30,0:30:87.24:0,87,1161	1/1:1,24:25:63.21:950,63,0	0/0:23,0:23:69.22:0,69,948	0/0:15,0:15:45.14:0,45,611	0/0:25,0:25:75.20:0,75,1007	0/0:15,0:15:45.13:0,45,598	0/0:27,0:27:80.04:0,80,1057	0/0:32,0:32:93.31:0,93,1297	0/0:23,0:23:69.20:0,69,929	1/1:0,24:24:69.22:1009,69,0	0/0:19,0:19:54.17:0,54,738	1/1:0,12:12:27.09:409,27,0
chr10	98134954	.	C	CT	799.55	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.226;DP=588;FS=4.024;HRun=8;HaplotypeScore=58.2707;InbreedingCoeff=0.9774;MQ=67.71;MQ0=2;MQRankSum=-0.651;QD=20.50;ReadPosRankSum=-4.140;VQSLOD=2.2215;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:92.99:0,93,835	0/0:13,0:13:32.97:0,33,288	0/0:14,0:12:16.80:0,17,217	0/0:14,0:13:14.49:0,14,151	0/0:25,0:24:62.96:0,63,563	0/0:13,0:13:33:0,33,297	0/0:18,0:18:39.01:0,39,357	1/1:11,21:32:17.23:675,17,0	0/0:23,0:23:63.03:0,63,577	0/0:22,0:20:56.76:0,57,504	0/0:11,0:11:27:0,27,243	0/0:35,0:35:99:0,102,930	0/0:21,0:21:48.01:0,48,438	0/0:30,0:30:83.79:0,84,751	0/0:22,0:22:66.03:0,66,601	0/0:14,0:14:36.01:0,36,329	0/0:29,0:29:75.03:0,75,686	0/0:21,0:21:57.02:0,57,518	0/0:28,0:28:72.03:0,72,656	0/0:20,0:20:51.01:0,51,467	0/0:21,0:21:60.03:0,60,549	0/0:20,0:20:54.01:0,54,490	0/0:19,0:19:51.03:0,51,467	0/0:20,0:20:54.02:0,54,494	0/0:20,0:20:56.97:0,57,512	0/0:19,0:19:48.02:0,48,439	0/0:23,0:23:60.03:0,60,549	1/1:0,7:7:21.06:242,21,0
chr10	98135559	.	CT	C	274.87	PASS	AC=2;AF=0.040;AN=50;BaseQRankSum=1.201;DP=845;FS=11.401;HRun=3;HaplotypeScore=47.9654;InbreedingCoeff=0.6708;MQ=24.90;MQ0=218;MQRankSum=-0.416;QD=9.82;ReadPosRankSum=1.520;VQSLOD=0.0571;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:23:27.09:0,27,385	0/0:16,0:8:15.05:0,15,215	./.	./.	0/0:46,0:13:18.06:0,18,246	0/0:30,0:20:24.08:0,24,345	0/0:28,0:11:21.07:0,21,294	0/0:45,0:5:9.03:0,9,130	0/0:27,0:19:24.04:0,24,322	0/0:40,0:16:42.14:0,42,596	0/0:21,0:9:15.05:0,15,215	0/0:32,0:24:33.11:0,33,474	0/0:37,0:22:24.08:0,24,345	0/0:26,0:15:12.04:0,12,173	0/0:36,0:25:33.11:0,33,474	1/1:2,26:20:30.09:368,30,0	0/0:33,0:13:12.04:0,12,173	0/0:40,0:10:9.01:0,9,129	0/0:27,0:16:48.14:0,48,665	0/0:38,0:13:15.01:0,15,192	0/0:38,0:14:3.01:0,3,43	0/0:38,0:18:38.96:0,39,467	0/0:25,0:11:15.05:0,15,215	0/0:38,0:9:12.04:0,12,172	0/0:31,0:17:23.71:0,24,298	0/0:34,0:18:45.15:0,45,644	0/0:38,0:21:30.07:0,30,408	./.
chr10	98138332	.	T	TC	811.19	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.012;DP=642;FS=6.347;HRun=7;HaplotypeScore=59.8547;InbreedingCoeff=0.9226;MQ=72.04;MQ0=0;MQRankSum=-1.420;QD=23.18;ReadPosRankSum=3.042;VQSLOD=3.7066;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,102,967	0/0:8,0:8:15.02:0,15,145	0/0:9,0:9:20.50:0,21,175	0/0:12,0:12:21.01:0,21,196	0/0:26,0:26:66.06:0,66,620	0/0:23,0:23:63.10:0,63,608	0/0:23,0:23:60.08:0,60,575	0/0:24,0:24:45.05:0,45,430	0/0:19,0:19:54.09:0,54,521	0/0:23,0:23:63.08:0,63,600	0/0:24,0:24:69.08:0,69,655	0/0:26,0:26:78.09:0,78,741	0/0:23,0:23:63.08:0,63,602	0/0:26,0:26:75.09:0,75,713	0/0:25,0:25:75.06:0,75,704	1/1:7,28:35:75.23:906,75,0	0/0:26,0:26:72.11:0,72,695	0/0:36,0:36:90.10:0,90,858	0/0:24,0:24:42.04:0,42,401	0/0:12,0:12:30.04:0,30,290	0/0:39,0:39:99:0,105,986	0/0:19,0:19:49.06:0,49,514	0/0:24,0:24:66.87:0,67,606	0/0:20,0:20:51.08:0,51,492	0/0:15,0:15:42.94:0,43,401	0/0:26,0:26:72.09:0,72,684	0/0:30,0:30:81.08:0,81,766	0/0:3,0:3:8.98:0,9,78
chr10	98139386	.	C	CA	1179.69	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.382;DP=658;FS=0.000;HRun=0;HaplotypeScore=66.1334;InbreedingCoeff=0.9989;MQ=86.56;MQ0=0;MQRankSum=-2.535;QD=26.81;ReadPosRankSum=2.820;VQSLOD=4.3945;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1512	0/0:16,0:16:45.08:0,45,602	0/0:25,0:25:69.10:0,69,893	0/0:20,0:20:54.18:0,54,748	0/0:32,0:32:87.24:0,87,1165	0/0:38,0:38:99:0,114,1531	0/0:21,0:21:63.15:0,63,833	0/0:31,0:31:86.70:0,87,1135	0/0:15,0:15:45.06:0,45,583	0/0:25,0:25:75.14:0,75,1001	0/0:19,0:19:54.04:0,54,702	0/0:16,0:16:48.09:0,48,616	0/0:18,0:18:53.85:0,54,699	0/0:17,0:17:51.16:0,51,694	0/0:33,0:33:99:0,99,1379	1/1:0,0:21:55.35:330,55,0	0/0:27,0:26:81.23:0,81,1106	1/1:1,22:23:63.13:971,63,0	0/0:19,0:19:45.15:0,45,627	0/0:27,0:27:81.26:0,81,1110	0/0:20,0:20:57.09:0,57,750	0/0:27,0:27:81.22:0,81,1094	0/0:15,0:15:45.11:0,45,606	0/0:32,0:32:96.31:0,96,1324	0/0:26,0:26:75.20:0,75,1022	0/0:25,0:25:69.22:0,69,948	0/0:24,0:24:69.14:0,69,937	0/0:8,0:8:24.08:0,24,335
chr10	98141930	.	CTTGTG	C	3672.51	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.823;DP=745;FS=5.533;HRun=0;HaplotypeScore=137.0471;InbreedingCoeff=0.9977;MQ=87.42;MQ0=0;MQRankSum=-5.430;QD=47.69;ReadPosRankSum=1.838;VQSLOD=3.5310;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,148,4438	0/0:7,0:7:21.07:0,21,650	0/0:27,0:27:75.26:0,75,2075	0/0:26,0:26:69.55:0,70,2099	0/0:27,0:27:81.26:0,81,2368	0/0:31,0:31:93.32:0,93,2834	0/0:22,0:22:54.17:0,54,1606	1/1:7,18:25:51.16:1032,51,0	0/0:30,0:30:90.31:0,90,2706	0/0:26,0:26:78.26:0,78,2274	0/0:20,0:20:60.21:0,60,1836	0/0:33,0:33:99:0,99,2956	0/0:28,0:28:84.29:0,84,2493	0/0:27,0:27:78.27:0,78,2392	0/0:32,0:32:96.31:0,96,2906	1/1:1,23:24:60.21:1260,60,0	0/0:15,0:15:36.12:0,36,1094	1/1:3,9:12:21.07:441,21,0	0/0:23,0:23:66.23:0,66,2004	0/0:38,0:38:99:0,111,3245	0/0:37,0:37:99:0,105,3238	0/0:24,0:24:69.21:0,69,1952	0/0:21,0:21:63.22:0,63,1930	0/0:36,0:36:99:0,105,3224	0/0:32,0:32:93.32:0,93,2862	0/0:33,0:33:87.28:0,87,2534	0/0:22,0:22:63.20:0,63,1830	1/1:2,14:16:45.15:940,45,0
chr10	98144075	.	A	AT	1703.28	PASS	AB=0.833;AC=9;AF=0.161;AN=56;BaseQRankSum=7.830;DP=500;FS=4.801;HRun=9;HaplotypeScore=52.9821;InbreedingCoeff=0.8574;MQ=73.66;MQ0=0;MQRankSum=-0.588;QD=21.56;ReadPosRankSum=1.613;VQSLOD=4.5393;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:71.97:0,72,625	0/0:9,0:9:20.99:0,21,182	0/0:12,0:11:29.94:0,30,252	0/0:12,0:12:11.39:0,11,133	0/0:23,0:22:62.99:0,63,546	0/0:16,0:16:38.99:0,39,339	0/0:16,0:16:41.98:0,42,365	1/1:6,13:19:39.11:431,39,0	0/0:14,0:14:41.99:0,42,363	0/0:20,0:21:49.98:0,50,415	0/0:22,0:22:59.98:0,60,518	0/0:11,0:11:29.99:0,30,260	0/0:24,0:24:68.97:0,69,595	0/0:22,0:22:59.96:0,60,517	0/1:8,2:10:36.38:36,0,174	1/1:1,18:19:25.08:505,25,0	0/0:29,0:29:77.98:0,78,677	1/1:1,18:19:48.13:531,48,0	0/0:17,0:17:38.96:0,39,332	0/0:19,0:19:44.99:0,45,391	0/0:11,0:11:32.99:0,33,287	0/0:13,0:13:35.99:0,36,312	0/0:17,0:16:44.97:0,45,387	0/0:11,0:11:29.99:0,30,260	0/0:23,1:24:29.80:0,30,488	0/0:33,0:33:89.97:0,90,779	0/0:19,0:19:50.97:0,51,438	1/1:0,12:12:33.09:365,33,0
chr10	98144215	.	A	AG	2786.44	PASS	AB=0.526;AC=7;AF=0.125;AN=56;BaseQRankSum=11.886;DP=483;FS=22.509;HRun=1;HaplotypeScore=53.4610;InbreedingCoeff=0.8101;MQ=78.49;MQ0=0;MQRankSum=-0.250;QD=36.19;ReadPosRankSum=1.194;VQSLOD=1.8024;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,1518	0/0:6,0:6:18.06:0,18,234	0/0:11,0:11:6.67:0,7,319	0/0:10,0:10:20.94:0,21,218	0/0:17,0:17:51.17:0,51,662	0/0:9,0:9:27.09:0,27,350	0/0:20,0:20:57.19:0,57,740	1/1:2,19:21:57.15:759,57,0	0/0:18,0:18:54.18:0,54,700	0/0:17,0:17:48.16:0,48,624	0/0:13,0:13:39.13:0,39,505	0/0:10,0:10:30.10:0,30,389	0/0:21,0:21:63.20:0,63,818	0/0:20,0:20:57:0,57,739	0/0:6,0:6:18.06:0,18,233	0/1:1,9:10:8.86:349,0,9	0/0:28,0:28:84.23:0,84,1058	1/1:2,40:42:99:1651,114,0	0/0:15,0:15:45.13:0,45,559	0/0:28,0:28:84.27:0,84,1091	0/0:27,0:27:81.26:0,81,1050	0/0:5,0:5:15.04:0,15,182	0/0:17,0:17:48.16:0,48,623	0/0:15,0:15:45.15:0,45,584	0/0:6,0:6:18.06:0,18,234	0/0:26,0:26:75.24:0,75,974	0/0:19,0:19:57.17:0,57,726	1/1:0,4:4:12.04:173,12,0
chr10	98150107	.	T	TA	379.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.158;DP=528;FS=14.085;HRun=9;HaplotypeScore=51.3579;InbreedingCoeff=0.9167;MQ=71.95;MQ0=0;MQRankSum=0.030;QD=19.96;ReadPosRankSum=-0.943;VQSLOD=2.4434;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,1:35:59.77:0,60,745	0/0:6,0:6:14.99:0,15,130	0/0:9,0:9:17.06:0,17,120	0/0:8,0:8:8.94:0,9,71	0/0:27,0:27:74.93:0,75,639	0/0:18,0:18:47.93:0,48,409	0/0:11,0:11:32.99:0,33,287	0/0:28,0:28:71.96:0,72,621	0/0:13,0:13:35.98:0,36,313	0/0:23,0:23:59.96:0,60,519	0/0:23,0:23:50.99:0,51,443	0/0:18,0:18:44.97:0,45,387	0/0:17,0:17:44.97:0,45,385	0/0:18,0:18:47.98:0,48,416	0/0:22,0:22:56.95:0,57,489	0/0:21,0:21:59.95:0,60,514	0/0:26,0:26:71.90:0,72,608	0/0:17,0:17:44.95:0,45,382	0/0:16,0:16:41.98:0,42,365	0/0:27,0:27:65.95:0,66,568	0/0:11,0:11:32.97:0,33,281	0/0:20,0:20:53.99:0,54,469	0/0:17,0:17:44.99:0,45,391	0/0:25,0:25:65.98:0,66,573	0/0:11,0:11:26.99:0,27,234	1/1:4,15:19:22.07:472,22,0	0/0:28,0:28:71.98:0,72,625	0/0:14,0:14:41.99:0,42,365
chr10	98152850	.	GCAGGCAGGCAGGCAGGCAGT	G	552.39	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.745;DP=589;FS=1.140;HRun=0;HaplotypeScore=272.9575;InbreedingCoeff=0.9151;MQ=57.32;MQ0=18;MQRankSum=-1.130;QD=50.22;ReadPosRankSum=2.612;VQSLOD=2.4742;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:16.64:0,17,873	0/0:8,0:8:24.08:0,24,842	0/0:10,0:7:20.98:0,21,469	0/0:12,0:8:24.08:0,24,529	0/0:11,0:9:15.03:0,15,290	0/0:8,0:8:24:0,24,735	0/0:43,0:33:84.12:0,84,2896	0/0:11,0:11:29.77:0,30,582	0/0:19,0:18:48.15:0,48,2632	0/0:17,0:17:48.12:0,48,2072	0/0:5,0:5:12.04:0,12,520	0/0:47,0:43:99:0,127,5944	0/0:26,0:26:72.23:0,72,3468	0/0:37,0:36:99:0,105,4920	0/0:30,0:27:81.24:0,81,4258	0/0:22,0:21:63.21:0,63,2737	0/0:27,0:26:78.27:0,78,4205	0/0:31,0:30:84.25:0,84,3778	0/0:14,0:12:33.05:0,33,770	0/0:7,0:7:18.06:0,18,559	0/0:52,0:43:99:0,102,3638	0/0:8,0:7:17.99:0,18,782	0/0:10,0:10:27.09:0,27,1256	0/0:53,0:52:99:0,153,8314	0/0:22,0:21:60.15:0,60,3016	1/1:2,9:10:23.51:645,24,0	0/0:13,0:13:39.13:0,39,1993	0/0:9,0:7:21.07:0,21,1250
chr10	98153229	.	GA	G	50.36	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.655;DP=479;FS=4.025;HRun=3;HaplotypeScore=68.9435;InbreedingCoeff=0.8945;MQ=55.79;MQ0=13;MQRankSum=-1.439;QD=3.36;ReadPosRankSum=-1.528;VQSLOD=-0.3732;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:9.37:0,9,37	0/0:9,0:9:23.48:0,23,263	0/0:16,0:8:15.05:0,15,197	0/0:8,0:8:21.06:0,21,256	0/0:16,0:16:39.34:0,39,434	0/0:13,0:12:26.57:0,27,328	0/0:20,0:18:44.65:0,45,500	0/0:35,0:34:86.64:0,87,1034	0/0:16,0:16:32.31:0,32,338	0/0:11,0:11:30.10:0,30,397	0/0:15,0:15:33.49:0,33,412	0/0:15,0:15:44.81:0,45,515	0/0:14,0:14:39.10:0,39,501	0/0:28,0:28:62.64:0,63,714	0/0:25,0:25:69.89:0,70,863	0/0:27,0:27:61.60:0,62,695	0/0:19,0:19:49.58:0,50,547	0/0:15,0:13:34.38:0,34,356	0/0:19,0:17:51.15:0,51,647	0/0:18,0:18:51.11:0,51,660	0/0:10,0:10:24.07:0,24,302	0/0:12,0:12:28.57:0,29,282	0/0:16,0:16:36.79:0,37,385	0/0:21,0:21:43.39:0,43,444	0/0:10,0:9:23.90:0,24,258	1/1:6,9:9:12.50:137,12,0	0/0:28,0:28:62.49:0,62,737	0/0:14,0:13:39.02:0,39,486
chr10	98153231	.	AAG	A	434.91	PASS	AB=0.894;AC=18;AF=0.346;AN=52;BaseQRankSum=3.373;DP=530;FS=1.884;HRun=0;HaplotypeScore=78.0481;InbreedingCoeff=0.1973;MQ=54.64;MQ0=13;MQRankSum=0.770;QD=1.99;ReadPosRankSum=3.832;VQSLOD=1.5414;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:8.92:69,9,0	0/1:8,1:9:17.78:27,0,18	./.	./.	0/1:19,0:19:17.44:17,0,102	0/1:12,3:14:17.80:27,0,18	0/1:20,0:18:3.16:3,0,79	0/0:38,0:37:9.91:0,10,106	1/1:13,0:20:2.84:14,3,0	0/0:15,0:15:15.34:0,15,103	0/0:16,0:16:3:0,3,26	0/0:21,0:21:26.78:0,27,224	0/1:17,0:17:4.85:5,0,87	0/0:32,0:32:14.93:0,15,117	0/0:28,0:28:23.61:0,24,307	0/0:29,0:29:32.63:0,33,290	0/1:17,3:21:6.12:67,0,6	1/1:14,1:13:9.02:97,9,0	0/0:20,0:18:9:0,9,103	0/0:19,0:19:14.81:0,15,135	0/0:9,0:9:3.01:0,3,45	1/1:10,5:15:8.77:78,9,0	0/1:13,5:18:56.63:83,0,57	0/1:17,6:23:28.18:86,0,28	0/0:12,0:11:9.01:0,9,101	1/1:11,0:7:2.98:22,3,0	0/0:34,1:35:9.18:0,9,373	0/0:16,0:15:17.25:0,17,173
chr10	98157812	.	AGACTT	A	1368.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.042;DP=740;FS=1.806;HRun=0;HaplotypeScore=130.3772;InbreedingCoeff=0.9995;MQ=80.69;MQ0=0;MQRankSum=-5.031;QD=59.52;ReadPosRankSum=0.992;VQSLOD=4.5601;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:63.22:1464,63,0	0/0:15,0:15:45.15:0,45,1436	0/0:26,0:26:78.03:0,78,2387	0/0:12,0:12:33.07:0,33,914	0/0:38,0:38:99:0,114,3626	0/0:30,0:30:90.31:0,90,2868	0/0:12,0:12:36.12:0,36,1148	0/0:41,0:41:99:0,123,3704	0/0:27,0:27:78.27:0,78,2595	0/0:32,0:32:96.33:0,96,3149	0/0:24,0:24:72.23:0,72,2321	0/0:38,0:38:99:0,114,3745	0/0:35,0:35:99:0,105,3327	0/0:24,0:24:72.25:0,72,2328	0/0:40,0:40:99:0,120,3942	0/0:31,0:31:93.32:0,93,2998	0/0:24,0:24:72.25:0,72,2309	0/0:19,0:19:57.20:0,57,1898	0/0:20,0:20:60.21:0,60,1932	0/0:23,0:23:69.19:0,69,2132	0/0:22,0:22:66.23:0,66,2150	0/0:36,0:36:99:0,108,3391	0/0:26,0:26:78.27:0,78,2457	0/0:24,0:24:72.25:0,72,2275	0/0:21,0:21:60.21:0,60,1946	0/0:23,0:23:69.24:0,69,2224	0/0:41,0:41:99:0,123,4016	0/0:13,0:13:39.13:0,39,1299
chr10	98160009	.	TTAA	T	1025.44	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.090;DP=577;FS=2.654;HRun=0;HaplotypeScore=85.1375;InbreedingCoeff=0.8995;MQ=72.60;MQ0=1;MQRankSum=1.830;QD=37.98;ReadPosRankSum=-1.124;VQSLOD=4.2647;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:25:58.77:0,59,399	0/0:13,0:13:39.13:0,39,940	0/0:19,0:19:39.37:0,39,509	0/0:8,0:8:6.80:0,7,194	0/0:31,0:31:93.25:0,93,1826	0/0:22,0:22:66.16:0,66,1297	0/0:8,0:8:24.05:0,24,440	0/0:25,0:25:66.21:0,66,1438	0/0:14,0:14:42.13:0,42,979	0/0:27,0:27:78.24:0,78,1621	0/0:23,0:23:69.23:0,69,1549	0/0:24,0:24:72.22:0,72,1585	0/0:17,0:17:51.14:0,51,1029	0/0:16,0:16:47.34:0,47,940	0/0:22,0:22:66.20:0,66,1479	0/0:23,0:23:69.22:0,69,1551	0/0:20,0:20:60.18:0,60,1297	0/0:18,0:18:54.14:0,54,1162	0/0:20,0:20:60.15:0,60,1191	0/0:44,0:44:99:0,126,2636	0/0:7,0:7:18.04:0,18,303	0/0:24,0:24:72.25:0,72,1702	0/0:25,0:25:75.01:0,75,1559	0/0:9,0:9:27.09:0,27,659	0/0:18,0:18:54.14:0,54,1040	1/1:1,26:27:17.85:1116,18,0	0/0:27,0:27:81.27:0,81,1851	0/0:20,0:20:60.17:0,60,1274
chr10	98162915	.	CCA	C	439.86	PASS	AB=0.887;AC=13;AF=0.241;AN=54;BaseQRankSum=3.147;DP=526;FS=12.359;HRun=0;HaplotypeScore=74.2736;InbreedingCoeff=-0.2723;MQ=60.66;MQ0=14;MQRankSum=0.862;QD=1.90;ReadPosRankSum=0.212;VQSLOD=0.6800;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:27:18:0,18,188	0/1:10,3:13:8.46:8,0,257	./.	0/0:32,0:15:0:0,0,0	0/0:11,0:10:6.02:0,6,86	0/1:26,0:26:12.61:13,0,369	0/1:11,0:11:16.15:16,0,161	0/0:23,0:22:3.90:0,4,40	0/1:11,0:12:8.12:8,0,39	0/0:16,0:15:21.04:0,21,240	0/0:16,0:16:9.03:0,9,123	0/1:14,1:15:11.47:11,0,214	0/1:18,1:17:38.83:39,0,139	0/1:10,0:11:2.08:2,0,122	0/0:21,0:22:33.10:0,33,448	0/1:13,11:25:5.59:329,0,6	0/1:20,6:26:52.81:53,0,467	0/0:13,0:17:21:0,21,215	0/0:11,0:11:3.01:0,3,43	0/1:13,1:15:43.94:44,0,232	0/0:14,0:25:11.92:0,12,158	0/0:17,0:18:9.95:0,10,258	0/1:8,3:11:11.45:11,0,234	0/1:26,2:28:16.87:17,0,564	0/1:16,2:18:26.70:27,0,412	0/0:16,0:19:28.48:0,28,179	0/0:21,0:21:6.89:0,7,209	0/0:9,0:9:12.04:0,12,178
chr10	98163241	.	GGT	G	418.11	PASS	AB=0.898;AC=13;AF=0.250;AN=52;BaseQRankSum=5.159;DP=553;FS=9.290;HRun=0;HaplotypeScore=78.6689;InbreedingCoeff=-0.1742;MQ=67.78;MQ0=4;MQRankSum=-0.942;QD=1.67;ReadPosRankSum=0.288;VQSLOD=0.7393;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:23.98:0,24,239	1/1:3,0:3:2.98:21,3,0	0/0:21,0:13:1.25:0,1,3	./.	0/0:13,0:13:13.86:0,14,260	0/1:25,2:28:78.57:79,0,284	0/0:22,0:22:24.05:0,24,322	0/1:32,0:31:20.39:20,0,129	0/1:17,1:18:12.74:13,0,186	0/0:15,0:15:0.05:0,0,244	./.	0/0:27,0:29:40.25:0,40,648	0/0:22,0:22:36.07:0,36,481	0/0:27,0:27:47.73:0,48,555	0/1:17,1:18:14.42:14,0,350	0/0:18,0:27:3:0,3,26	0/1:22,7:30:72.18:72,0,390	0/1:26,3:29:43.95:44,0,393	0/0:17,0:17:20.78:0,21,228	0/1:14,1:15:15.34:15,0,187	0/0:27,5:31:11.62:0,12,450	0/1:15,0:15:12.37:12,0,174	0/1:8,0:9:23.35:23,0,183	0/1:34,6:40:99:192,0,573	0/0:8,0:9:12.03:0,12,160	0/1:6,0:12:3.05:53,0,3	0/0:13,0:13:27.01:0,27,317	0/0:3,0:2:3.01:0,3,43
chr10	98163339	.	T	TCC	737.87	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.092;DP=504;FS=3.736;HRun=8;HaplotypeScore=67.1287;InbreedingCoeff=0.9569;MQ=81.71;MQ0=0;MQRankSum=-0.670;QD=13.92;ReadPosRankSum=-2.928;VQSLOD=0.5466;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:5,17:22:18.95:288,19,0	0/0:6,0:6:15.04:0,15,167	0/0:10,0:11:8.93:0,9,154	0/0:19,0:20:23.82:0,24,234	0/0:14,0:14:36.57:0,37,400	0/0:18,0:19:53.75:0,54,561	0/0:21,0:21:54.10:0,54,589	0/0:20,0:20:36.06:0,36,394	0/0:16,0:16:45.12:0,45,502	0/0:19,0:19:51.13:0,51,568	0/0:21,0:21:57.14:0,57,626	0/0:16,0:16:33.06:0,33,366	0/0:15,0:15:39.10:0,39,434	0/0:23,0:23:63.11:0,63,682	0/0:30,0:30:78.16:0,78,851	0/0:16,0:16:42.11:0,42,468	0/0:31,0:31:75.17:0,75,836	1/1:2,1:20:39:393,39,0	0/0:12,0:12:36.10:0,36,401	0/0:18,0:18:45.11:0,45,501	0/0:21,0:21:57.14:0,57,635	0/0:17,0:17:51.13:0,51,559	0/0:16,0:17:47.85:0,48,512	0/0:31,0:31:84.13:0,84,898	0/0:13,0:13:36.09:0,36,396	1/1:11,0:11:17.98:197,18,0	0/0:20,0:20:57.15:0,57,635	0/0:4,0:4:12.03:0,12,134
chr10	98164194	.	A	AT	1104.06	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.460;DP=663;FS=1.482;HRun=1;HaplotypeScore=61.9447;InbreedingCoeff=0.9964;MQ=70.58;MQ0=0;MQRankSum=1.513;QD=38.07;ReadPosRankSum=-0.100;VQSLOD=3.9696;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:80.66:0,81,1004	0/0:18,0:18:54.13:0,54,659	0/0:10,0:10:30.06:0,30,360	0/0:8,0:8:24.06:0,24,293	0/0:42,0:42:99:0,123,1502	0/0:24,0:24:69.22:0,69,893	0/0:15,0:15:45.15:0,45,582	0/0:29,0:29:72.15:0,72,844	0/0:25,0:25:72.10:0,72,881	0/0:50,0:50:99:0,144,1794	0/0:17,0:17:51.13:0,51,621	0/0:33,0:33:93.30:0,93,1202	0/0:17,0:17:51.15:0,51,645	0/0:25,0:25:75.21:0,75,932	0/0:25,0:25:72.21:0,72,906	0/0:22,0:22:66.19:0,66,826	0/0:19,0:19:57.10:0,57,699	0/0:26,0:26:75.15:0,75,898	0/0:13,0:13:39.10:0,39,470	0/0:22,0:22:63.17:0,63,775	0/0:22,0:22:66.19:0,66,827	0/0:31,0:31:76.81:0,77,999	0/0:25,0:25:75.21:0,75,932	0/0:21,0:21:63.19:0,63,801	0/0:24,0:24:69.22:0,69,882	1/1:0,29:29:87.23:1199,87,0	0/0:34,0:34:99:0,102,1263	0/0:9,0:9:27.09:0,27,348
chr10	98164893	.	TCCTCTCTCTC	T	533.93	PASS	AB=0.921;AC=5;AF=0.089;AN=56;BaseQRankSum=2.728;DP=570;FS=4.898;HRun=0;HaplotypeScore=155.6174;InbreedingCoeff=0.3373;MQ=57.41;MQ0=26;MQRankSum=-2.084;QD=9.53;ReadPosRankSum=-3.434;VQSLOD=0.9835;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,3:13:35.71:257,36,0	0/0:7,0:7:17.88:0,18,357	0/0:37,0:19:49.73:0,50,446	0/0:57,0:18:21.38:0,21,314	0/0:22,0:21:47.88:0,48,626	0/0:9,0:8:21.04:0,21,682	0/0:19,0:19:50.89:0,51,1284	0/0:22,0:21:57.27:0,57,545	0/0:15,0:15:42.04:0,42,1049	0/0:18,0:16:45.54:0,46,1284	0/0:25,0:23:54.03:0,54,1289	0/0:23,0:23:56.79:0,57,1160	0/0:15,0:14:36.06:0,36,1140	0/0:12,0:12:32.92:0,33,597	0/0:22,0:22:57.28:0,57,1341	0/1:12,1:15:99:197,0,128	0/0:31,0:30:67.16:0,67,2157	0/1:14,0:13:99:142,0,302	0/0:17,0:16:46.18:0,46,598	0/0:19,0:19:44.64:0,45,758	0/0:30,0:28:69.13:0,69,2112	0/0:22,0:21:44.98:0,45,874	0/0:13,0:12:23.95:0,24,773	0/0:31,0:29:78.06:0,78,2334	0/0:19,0:18:42.53:0,43,805	0/1:12,0:10:61.82:62,0,627	0/0:19,0:17:45.05:0,45,1031	0/0:9,0:10:26.93:0,27,221
chr10	98164939	.	CTCGT	C	700.44	PASS	AB=1.000;AC=18;AF=0.360;AN=50;BaseQRankSum=2.671;DP=518;FS=18.924;HRun=0;HaplotypeScore=101.4189;InbreedingCoeff=-0.3896;MQ=44.68;MQ0=45;MQRankSum=0.887;QD=1.91;ReadPosRankSum=0.582;VQSLOD=0.0142;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:8,0:8:5.03:0,5,111	./.	./.	0/1:8,0:7:10.61:11,0,36	0/0:11,0:11:21.07:0,21,277	0/1:23,0:21:36.43:36,0,297	0/0:22,0:19:14.99:0,15,162	0/1:17,0:16:64.89:65,0,127	0/1:24,0:21:25.08:25,0,295	0/1:17,0:14:11.67:12,0,142	0/1:15,0:14:56.39:56,0,99	0/1:18,0:17:65.57:66,0,281	0/1:20,0:18:16.16:16,0,153	0/1:22,0:22:94.25:94,0,171	1/1:18,0:17:8.55:57,9,0	0/1:39,0:38:99:165,0,477	0/0:12,0:9:9.01:0,9,95	0/0:16,0:13:15.01:0,15,180	0/0:19,0:16:11.70:0,12,292	0/1:42,0:39:76.66:77,0,448	0/0:21,6:24:22.60:0,23,239	0/1:14,0:13:43.15:43,0,171	0/1:43,0:36:82.01:82,0,760	0/1:21,0:19:2.29:2,0,298	0/0:18,0:14:32.72:0,33,317	0/1:21,0:19:35.95:36,0,398	0/1:5,0:3:5.52:6,0,75
chr10	98164941	.	C	CGTGT	261.63	PASS	AB=0.679;AC=3;AF=0.065;AN=46;BaseQRankSum=3.363;DP=531;FS=0.000;HRun=0;HaplotypeScore=111.9925;InbreedingCoeff=0.4633;MQ=44.05;MQ0=48;MQRankSum=-3.275;QD=6.38;ReadPosRankSum=-1.024;VQSLOD=2.0314;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:8,0:8:10.59:0,11,140	./.	./.	./.	0/0:10,0:11:3.50:0,4,128	0/0:23,0:21:17.63:0,18,246	0/0:23,0:20:8.30:0,8,72	0/0:15,0:15:1.60:0,2,26	0/0:22,0:18:15.03:0,15,194	0/0:15,0:13:3.01:0,3,47	0/0:15,0:14:9.02:0,9,105	0/0:19,0:18:14.96:0,15,203	0/0:20,0:18:8.95:0,9,116	0/0:20,0:21:14.94:0,15,206	0/1:10,8:18:0.05:0,0,1	0/0:42,0:41:14.86:0,15,373	./.	0/0:19,0:16:8.49:0,8,116	0/0:21,0:16:18.05:0,18,253	0/0:44,0:40:29.79:0,30,423	0/0:26,0:23:14.73:0,15,227	0/0:12,0:12:9.02:0,9,121	0/0:43,0:36:45.33:0,45,601	0/0:20,0:18:23.87:0,24,339	1/1:22,0:18:21.06:351,21,0	0/0:20,0:18:21.14:0,21,329	0/0:5,0:3:9.02:0,9,121
chr10	98165437	.	G	GAA	216.38	PASS	AC=4;AF=0.083;AN=48;BaseQRankSum=-1.316;DP=416;FS=4.205;HRun=15;HaplotypeScore=43.2045;InbreedingCoeff=0.4789;MQ=25.65;MQ0=147;MQRankSum=0.089;QD=7.73;ReadPosRankSum=0.493;VQSLOD=-0.1964;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:7:9:0,9,88	0/0:5,0:5:8.29:0,8,56	./.	./.	0/0:22,0:22:26.39:0,26,252	0/0:17,0:12:8.86:0,9,89	0/0:10,0:4:6:0,6,60	./.	0/0:10,0:9:8.69:0,9,89	0/0:16,0:14:32.97:0,33,331	0/0:18,0:16:14.46:0,14,134	0/0:19,0:13:20.90:0,21,200	0/0:10,0:7:5.04:0,5,33	0/0:9,0:7:3.01:0,3,30	0/0:14,0:11:17.99:0,18,167	0/0:17,0:10:11.82:0,12,120	0/0:17,0:6:8.91:0,9,76	1/1:5,0:2:5.36:23,5,0	0/0:6,0:3:3.01:0,3,30	0/0:32,0:30:52.82:0,53,505	./.	0/0:16,0:16:9.81:0,10,82	0/0:16,0:14:8.88:0,9,145	0/0:13,0:4:6.01:0,6,59	0/0:15,0:14:21.42:0,21,155	1/1:10,13:14:26.37:299,26,0	0/0:20,0:18:28.92:0,29,267	0/0:8,0:6:0.90:0,1,27
chr10	98168561	.	GGTGT	G	273.25	PASS	AB=0.918;AC=10;AF=0.192;AN=52;BaseQRankSum=3.775;DP=596;FS=2.402;HRun=0;HaplotypeScore=104.2720;InbreedingCoeff=0.0188;MQ=64.59;MQ0=8;MQRankSum=0.891;QD=1.35;ReadPosRankSum=-0.168;VQSLOD=2.0796;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,1:26:29.34:29,0,122	0/1:8,0:8:40.76:41,0,43	./.	./.	0/1:28,0:28:14.63:15,0,496	0/1:21,4:24:93.72:94,0,284	0/0:16,0:18:21.06:0,21,401	0/0:32,0:31:23.96:0,24,275	0/0:21,0:22:29.62:0,30,450	0/0:17,0:16:12.04:0,12,244	0/1:19,1:21:20.29:20,0,274	0/0:22,0:23:44.72:0,45,718	0/0:12,0:12:6:0,6,94	0/1:17,2:19:27.79:28,0,243	0/0:24,0:23:41.83:0,42,727	0/0:13,0:15:0.47:0,0,1	0/1:16,1:19:14.27:14,0,424	0/0:26,0:27:41.63:0,42,727	0/0:16,0:16:9.02:0,9,146	0/0:19,0:19:38.83:0,39,666	0/0:31,0:33:41.88:0,42,762	0/0:14,0:14:17.98:0,18,301	0/0:28,0:30:38.85:0,39,756	0/1:27,1:29:2.09:2,0,776	0/0:11,0:13:17.80:0,18,339	1/1:18,6:24:12.03:168,12,0	0/0:17,0:17:26.98:0,27,442	0/0:8,0:8:6.02:0,6,142
chr10	98168756	.	CA	C	771.04	PASS	AB=0.804;AC=7;AF=0.125;AN=56;BaseQRankSum=8.475;DP=572;FS=0.507;HRun=13;HaplotypeScore=78.0189;InbreedingCoeff=0.4492;MQ=77.33;MQ0=2;MQRankSum=0.465;QD=7.41;ReadPosRankSum=4.380;VQSLOD=2.7551;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:30:71.23:542,71,0	0/0:6,0:7:14.86:0,15,131	0/1:25,2:24:15.22:15,0,100	0/0:27,0:21:9.46:0,9,77	0/0:24,0:26:62.57:0,63,547	0/0:23,2:25:26.17:0,26,416	0/0:19,0:19:39.04:0,39,368	0/0:28,1:29:26.03:0,26,375	0/0:16,0:16:38.97:0,39,351	0/0:17,2:20:4.08:0,4,347	0/0:20,0:20:42.06:0,42,404	0/0:16,1:17:17.09:0,17,298	0/0:25,0:25:60.02:0,60,544	0/0:12,0:17:26.72:0,27,214	0/1:18,3:22:8.74:9,0,383	0/1:4,8:12:29.27:126,0,29	0/0:18,1:21:25.92:0,26,386	1/1:1,11:12:29.83:219,30,0	0/0:20,1:21:35.03:0,35,477	0/0:15,1:16:11.13:0,11,266	0/0:20,0:22:38.89:0,39,360	0/0:13,1:15:8.45:0,8,227	0/0:12,1:13:8.10:0,8,224	0/0:16,0:16:30.02:0,30,281	0/0:27,2:31:58.87:0,59,698	0/0:9,0:27:58.33:0,58,347	0/0:25,1:26:29.94:0,30,407	0/0:11,0:11:30.05:0,30,292
chr10	98169206	.	T	TC	739.42	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-0.378;DP=406;FS=0.739;HRun=9;HaplotypeScore=42.2640;InbreedingCoeff=0.9711;MQ=77.01;MQ0=0;MQRankSum=-0.515;QD=12.75;ReadPosRankSum=-3.328;VQSLOD=1.9183;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,9:21:36.07:381,36,0	0/0:11,0:11:23.98:0,24,205	0/0:12,0:12:26.18:0,26,209	0/0:12,0:11:17.99:0,18,154	0/0:18,0:18:47.97:0,48,413	0/0:8,0:7:20.98:0,21,180	0/0:13,0:13:32.95:0,33,277	0/0:29,0:30:46.99:0,47,396	0/0:16,0:16:38.98:0,39,338	0/0:12,0:12:26.97:0,27,230	0/0:16,0:16:41.97:0,42,363	0/0:20,0:20:56.98:0,57,492	0/0:8,0:8:17.98:0,18,156	0/0:15,0:15:26.95:0,27,234	0/0:7,0:7:17.99:0,18,156	1/1:2,0:10:14.20:71,14,0	0/0:20,0:20:47.99:0,48,416	1/1:2,13:15:21.06:232,21,0	0/0:9,0:9:14.99:0,15,129	0/0:8,0:8:18:0,18,156	0/0:31,0:31:71.91:0,72,618	0/0:12,0:12:32.98:0,33,283	0/0:17,0:17:44.98:0,45,390	0/0:20,0:20:47.97:0,48,417	0/0:19,0:19:47.93:0,48,410	1/1:4,8:12:21.02:213,21,0	0/0:8,0:8:24:0,24,208	0/0:5,0:5:15:0,15,130
chr10	98170962	.	A	AC	3119.76	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.455;DP=654;FS=6.437;HRun=5;HaplotypeScore=65.5753;InbreedingCoeff=0.9965;MQ=80.68;MQ0=1;MQRankSum=-5.881;QD=33.91;ReadPosRankSum=1.216;VQSLOD=4.1825;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,40:44:99:1581,117,0	0/0:10,0:10:27.08:0,27,306	0/0:16,0:15:33:0,33,347	0/0:22,0:22:57.10:0,57,612	0/0:20,0:20:54.11:0,54,589	0/0:31,0:31:84.24:0,84,951	0/0:26,0:26:69.20:0,69,782	0/0:24,0:24:57.16:0,57,646	0/0:25,0:25:66.19:0,66,748	0/0:26,0:26:69.18:0,69,773	0/0:12,0:12:33.08:0,33,363	0/0:32,0:32:93.25:0,93,1042	0/0:25,0:25:72.20:0,72,816	0/0:28,0:28:84.22:0,84,942	0/0:23,0:23:66.19:0,66,746	1/1:2,29:31:78.26:1067,78,0	0/0:31,0:31:78.14:0,78,885	0/0:20,0:20:60.17:0,60,679	0/0:16,0:16:39.11:0,39,442	0/0:20,0:20:54.15:0,54,611	0/0:48,0:48:99:0,144,1631	0/0:14,0:14:42.08:0,42,461	0/0:21,0:21:54.15:0,54,607	0/0:28,0:28:78.22:0,78,883	0/0:18,0:18:54.15:0,54,610	1/1:1,16:17:45.15:615,45,0	0/0:20,0:20:54.15:0,54,611	0/0:6,0:6:18.05:0,18,204
chr10	98171660	.	TTG	T	134.69	PASS	AB=0.977;AC=13;AF=0.283;AN=46;BaseQRankSum=2.707;DP=495;FS=33.021;HRun=0;HaplotypeScore=74.4773;InbreedingCoeff=-0.1102;MQ=64.94;MQ0=27;MQRankSum=-0.325;QD=0.62;ReadPosRankSum=2.766;VQSLOD=-0.2356;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:0:0,0,0	./.	./.	./.	0/1:21,0:21:13.17:13,0,77	0/0:10,0:10:6:0,6,67	0/0:16,0:14:3.01:0,3,43	./.	0/1:11,1:12:17.91:26,0,18	0/0:8,0:7:12:0,12,107	0/0:15,0:15:4.81:0,5,30	0/1:20,0:20:20.41:20,0,78	0/0:9,0:8:3.01:0,3,42	0/1:17,0:17:15.02:15,0,99	0/1:8,1:9:15.94:25,0,16	1/1:7,2:10:8.85:77,9,0	0/1:31,1:31:40.12:40,0,191	0/0:14,0:14:2.60:0,3,10	1/1:33,0:32:2.80:13,3,0	./.	0/0:32,0:29:20.92:0,21,173	0/0:12,0:11:3.01:0,3,43	0/0:10,0:10:5.96:0,6,44	0/1:26,0:26:17.02:17,0,112	0/0:12,0:13:9:0,9,93	0/0:14,0:13:3.01:0,3,41	0/1:19,0:19:16.49:16,0,93	0/0:7,0:6:5.99:0,6,48
chr10	98171765	.	CT	C	171.38	PASS	AB=0.977;AC=8;AF=0.143;AN=56;BaseQRankSum=3.498;DP=481;FS=6.168;HRun=14;HaplotypeScore=78.9111;InbreedingCoeff=0.3254;MQ=63.04;MQ0=8;MQRankSum=-0.160;QD=1.75;ReadPosRankSum=0.833;VQSLOD=-0.7125;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,3:18:40.25:252,40,0	0/1:7,0:7:5.62:6,0,84	0/0:38,1:17:5.96:0,6,67	0/0:27,0:10:9.08:0,9,41	0/0:19,1:20:14.64:0,15,243	0/0:17,0:17:35.98:0,36,317	0/1:21,1:22:3.16:3,0,218	0/0:15,1:13:6.37:0,6,196	0/0:9,0:9:17.76:0,18,150	0/0:17,0:17:10.35:0,10,313	0/0:20,0:21:37.24:0,37,331	0/0:13,0:13:26.01:0,26,222	0/0:10,0:9:0.36:0,0,94	0/0:11,0:11:24.37:0,24,179	0/0:16,0:16:34.26:0,34,300	1/1:9,0:10:7.22:22,7,0	0/0:19,0:19:16.11:0,16,203	0/0:2,0:8:2.84:0,3,14	0/0:20,0:19:27.11:0,27,332	0/1:21,0:21:9.49:9,0,227	0/0:13,0:12:17.02:0,17,138	0/0:14,1:16:9.39:0,9,194	0/1:18,0:19:1.31:1,0,144	0/0:20,0:21:41.14:0,41,334	0/0:15,0:15:26.17:0,26,311	0/0:6,0:20:28.50:0,28,162	0/0:23,1:24:6.57:0,7,300	0/0:6,0:6:11.97:0,12,73
chr10	98174977	.	C	CT	648.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.849;DP=539;FS=0.000;HRun=6;HaplotypeScore=47.6369;InbreedingCoeff=0.9508;MQ=70.58;MQ0=0;MQRankSum=0.332;QD=30.86;ReadPosRankSum=-0.358;VQSLOD=3.7358;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:39.04:0,39,387	0/0:9,0:9:24.05:0,24,245	0/0:9,0:9:17.05:0,17,150	0/0:6,0:6:12.02:0,12,122	0/0:36,0:36:99:0,102,1040	0/0:21,0:21:60.11:0,60,599	0/0:15,0:15:42.08:0,42,422	0/0:34,0:34:84.13:0,84,837	0/0:19,0:19:54.12:0,54,551	0/0:38,0:38:99:0,111,1120	0/0:28,0:28:75.07:0,75,738	0/0:13,0:13:39.09:0,39,398	0/0:18,0:18:45.09:0,45,454	0/0:25,0:25:72.16:0,72,734	0/0:17,0:17:51.12:0,51,520	0/0:20,0:20:54.12:0,54,551	0/0:20,0:20:54.10:0,54,542	0/0:16,0:16:42.10:0,42,428	0/0:13,0:13:33.07:0,33,337	0/0:36,0:36:99:0,105,1071	0/0:7,0:7:21.05:0,21,214	0/0:15,0:15:42.09:0,42,428	0/0:15,0:15:42.10:0,42,428	0/0:11,0:11:33.07:0,33,336	0/0:24,0:24:69.16:0,69,704	1/1:1,20:21:60.18:743,60,0	0/0:28,0:28:84.19:0,84,857	0/0:9,0:9:21.04:0,21,214
chr10	98175271	.	CT	C	589.09	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.723;DP=674;FS=3.131;HRun=4;HaplotypeScore=65.7144;InbreedingCoeff=0.9896;MQ=67.46;MQ0=0;MQRankSum=0.603;QD=28.05;ReadPosRankSum=-0.136;VQSLOD=2.9007;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,1600	0/0:8,0:8:24.07:0,24,319	0/0:35,0:34:87.21:0,87,1108	0/0:31,0:28:69.19:0,69,909	0/0:24,0:24:66.22:0,66,924	0/0:21,0:21:63.19:0,63,864	0/0:24,0:24:72.22:0,72,975	0/0:27,0:27:78.25:0,78,1063	0/0:24,0:24:72.22:0,72,990	0/0:22,0:22:63.20:0,63,867	0/0:12,0:12:33.08:0,33,441	0/0:23,0:23:69.22:0,69,948	0/0:21,0:21:63.13:0,63,837	0/0:28,0:28:81.27:0,81,1133	0/0:25,0:25:75.17:0,75,989	1/1:0,21:21:57.17:684,57,0	0/0:28,0:28:75.21:0,75,1012	0/0:29,0:29:87.24:0,87,1163	0/0:25,0:25:72.21:0,72,960	0/0:27,0:27:81.26:0,81,1119	0/0:46,0:46:99:0,138,1889	0/0:12,0:12:33.11:0,33,462	0/0:16,0:16:44.35:0,44,580	0/0:25,0:25:75.25:0,75,1050	0/0:23,0:23:69.21:0,69,934	0/0:25,0:25:69.22:0,69,951	0/0:19,0:19:57.19:0,57,798	0/0:12,0:12:18.06:0,18,252
chr10	98178955	.	AT	A	1130.54	PASS	AB=0.875;AC=9;AF=0.161;AN=56;BaseQRankSum=8.333;DP=343;FS=14.733;HRun=10;HaplotypeScore=46.8332;InbreedingCoeff=0.8203;MQ=64.37;MQ0=0;MQRankSum=-5.398;QD=13.79;ReadPosRankSum=2.353;VQSLOD=1.8897;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:23:38.63:124,39,0	0/0:4,0:4:9.02:0,9,100	0/0:12,0:9:9.02:0,9,96	0/0:13,0:14:11.49:0,11,238	0/0:13,0:14:35.92:0,36,371	0/0:16,0:16:36.10:0,36,398	0/0:8,0:8:24.02:0,24,250	0/0:18,0:18:48.11:0,48,516	0/0:9,0:9:24.06:0,24,265	0/0:10,0:10:27.07:0,27,299	0/0:10,0:10:30.06:0,30,317	0/0:10,0:10:30.07:0,30,323	0/0:12,0:12:27.06:0,27,288	0/0:11,0:11:30.08:0,30,332	0/0:17,0:17:48.12:0,48,518	1/1:2,14:16:41.98:364,42,0	0/0:13,0:13:33.08:0,33,359	1/1:3,12:15:35.74:300,36,0	0/0:10,0:10:24.06:0,24,265	0/0:7,0:7:18.04:0,18,191	0/0:13,0:13:36.07:0,36,381	0/1:6,1:7:8.01:8,0,148	0/0:12,0:12:30.07:0,30,323	0/0:9,0:9:21.06:0,21,232	0/0:10,0:10:21.06:0,21,232	1/1:2,19:21:56.98:497,57,0	0/0:17,0:17:36.07:0,36,381	0/0:4,0:4:5.98:0,6,54
chr10	98179001	.	TCCCC	T	2605.77	PASS	AB=0.692;AC=7;AF=0.130;AN=54;BaseQRankSum=-3.857;DP=248;FS=1.992;HRun=12;HaplotypeScore=59.2402;InbreedingCoeff=0.5281;MQ=64.35;MQ0=1;MQRankSum=-4.080;QD=28.02;ReadPosRankSum=4.196;VQSLOD=2.0745;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,28:38:92.98:1251,93,0	0/0:1,0:1:2.99:0,3,24	0/0:11,0:9:9.66:0,10,107	0/0:14,0:10:15.01:0,15,189	0/0:2,0:5:8.49:0,8,87	0/0:5,0:10:20.90:0,21,206	0/0:8,0:8:11.88:0,12,104	0/0:8,0:12:18.02:0,18,211	0/0:1,0:2:5.93:0,6,44	0/0:3,0:5:8.85:0,9,62	0/0:6,0:7:6.02:0,6,72	0/0:7,0:9:23.94:0,24,271	0/0:3,0:3:3.01:0,3,54	0/0:11,0:11:24:0,24,303	0/0:6,0:7:15.04:0,15,224	0/1:10,1:18:3.06:3,0,282	0/0:4,0:6:12.03:0,12,150	1/1:4,8:12:27.07:405,27,0	0/0:8,0:8:5.98:0,6,48	0/0:3,0:3:3.01:0,3,49	0/0:2,0:3:3.01:0,3,37	0/0:4,0:5:6.01:0,6,66	0/0:3,0:3:6.01:0,6,57	./.	0/0:3,0:5:9.49:0,9,104	1/1:2,23:25:72.24:1085,72,0	0/0:7,0:10:20.92:0,21,245	0/0:2,0:4:9.02:0,9,102
chr10	98179967	.	TTG	T	336.73	PASS	AB=0.930;AC=10;AF=0.192;AN=52;BaseQRankSum=3.150;DP=724;FS=4.411;HRun=0;HaplotypeScore=110.3030;InbreedingCoeff=-0.0191;MQ=59.25;MQ0=11;MQRankSum=1.168;QD=1.25;ReadPosRankSum=1.066;VQSLOD=1.9738;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:26:15.87:0,16,141	0/0:7,0:7:6.90:0,7,80	./.	./.	0/0:14,0:14:21.07:0,21,307	0/0:20,0:36:50.23:0,50,510	1/1:18,15:34:21.18:222,21,0	0/0:39,0:39:31.36:0,31,215	0/1:41,0:40:17.98:18,0,652	0/0:29,0:29:45.41:0,45,572	0/0:22,0:22:36.42:0,36,485	0/1:21,0:22:5.13:5,0,326	0/0:19,0:20:33.08:0,33,433	0/0:25,0:25:21.22:0,21,457	0/0:27,1:28:5.54:0,6,573	0/0:15,0:28:21.31:0,21,173	0/0:24,0:24:33.08:0,33,451	0/0:14,0:14:11.48:0,11,112	0/0:28,0:25:20.63:0,21,174	0/1:16,3:19:47.39:47,0,396	0/1:40,2:41:22.63:23,0,408	0/0:35,2:36:45.11:0,45,619	0/0:15,0:15:4.05:0,4,297	0/1:27,6:32:66.84:67,0,267	0/1:22,1:24:22.56:23,0,379	0/1:26,1:28:16.21:16,0,497	0/1:25,1:27:58.17:58,0,367	0/0:6,0:6:11.98:0,12,134
chr10	98180013	.	CT	C	196.85	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=3.736;DP=599;FS=5.781;HRun=8;HaplotypeScore=78.7791;InbreedingCoeff=0.6141;MQ=65.18;MQ0=7;MQRankSum=-1.150;QD=4.47;ReadPosRankSum=-0.902;VQSLOD=-0.0090;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:16:32.85:283,33,0	0/0:4,0:4:9.03:0,9,109	0/0:26,0:15:42.08:0,42,481	0/1:27,0:13:18.66:19,0,220	0/0:23,0:23:63.10:0,63,716	0/0:31,0:31:63.19:0,63,758	0/0:24,0:24:54.08:0,54,615	0/0:26,0:26:72.20:0,72,848	0/0:35,0:35:79.27:0,79,918	0/0:22,0:22:48.15:0,48,578	0/0:23,0:23:60.16:0,60,701	0/0:27,0:27:69.14:0,69,794	0/0:22,0:22:54.15:0,54,630	0/0:19,0:19:54.13:0,54,616	0/0:29,0:29:72.55:0,73,816	0/0:18,0:18:39.07:0,39,454	0/0:27,0:27:66.62:0,67,751	0/0:6,0:6:15.05:0,15,181	0/0:8,0:8:21.05:0,21,244	0/0:28,0:28:81.13:0,81,946	0/0:20,0:20:54.12:0,54,636	0/0:22,0:22:51.99:0,52,592	0/0:16,0:16:45.13:0,45,530	0/0:18,0:18:33.09:0,33,387	0/0:20,0:20:43:0,43,498	0/0:26,0:26:69.20:0,69,821	0/0:28,0:28:83.58:0,84,949	0/0:7,0:7:21.05:0,21,242
chr10	98180227	.	T	TTTG	332.01	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.068;DP=654;FS=3.698;HRun=0;HaplotypeScore=95.8731;InbreedingCoeff=0.8961;MQ=69.09;MQ0=2;MQRankSum=-2.287;QD=7.38;ReadPosRankSum=1.024;VQSLOD=2.8562;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:30:25.26:211,25,0	0/0:4,0:4:9.03:0,9,123	0/0:32,0:24:9.02:0,9,108	0/0:24,0:21:12:0,12,122	0/0:28,0:28:51.15:0,51,667	0/0:25,0:25:44.77:0,45,520	0/0:24,0:24:54.16:0,54,723	0/0:30,0:30:30.09:0,30,396	0/0:28,0:28:57.16:0,57,737	0/0:17,0:17:33.09:0,33,424	0/0:28,0:28:36.11:0,36,480	0/0:28,0:28:54.17:0,54,726	0/0:21,0:21:39.13:0,39,535	0/0:20,0:20:30.09:0,30,397	0/0:21,0:21:33.09:0,33,421	0/0:30,0:30:57.19:0,57,782	0/0:23,0:23:36.12:0,36,493	1/1:7,8:15:12.51:237,13,0	0/0:17,0:17:12.04:0,12,165	0/0:24,0:24:42.13:0,42,560	0/0:20,0:20:36.10:0,36,477	0/0:24,0:24:42.13:0,42,563	0/0:16,0:16:24.07:0,24,313	0/0:31,0:31:60.16:0,60,802	0/0:23,0:23:52.98:0,53,693	0/0:36,0:36:69.18:0,69,860	0/0:25,0:25:51.17:0,51,700	0/0:10,0:10:21.07:0,21,287
chr10	98181689	.	CGT	C	417.92	PASS	AB=0.887;AC=18;AF=0.346;AN=52;BaseQRankSum=4.248;DP=498;FS=1.547;HRun=0;HaplotypeScore=66.9461;InbreedingCoeff=-0.5340;MQ=67.08;MQ0=5;MQRankSum=1.525;QD=1.37;ReadPosRankSum=1.154;VQSLOD=1.5081;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:25:9.01:0,9,95	0/1:4,1:5:26.93:27,0,39	./.	./.	0/1:11,2:13:61.82:62,0,117	0/1:26,3:29:86.12:86,0,161	0/1:19,3:22:83.29:83,0,267	0/0:24,0:24:5.96:0,6,43	0/1:5,2:7:20.89:21,0,119	0/0:18,0:18:23.99:0,24,265	0/1:15,0:17:5.08:5,0,72	0/1:11,2:13:17.90:18,0,165	0/1:18,3:21:65.70:66,0,296	0/1:13,1:14:20.92:21,0,77	0/1:16,1:16:17.90:18,0,165	0/0:10,0:13:9.01:0,9,97	0/1:25,2:28:10.97:11,0,356	0/0:26,0:26:35.53:0,36,314	0/0:8,0:9:12.01:0,12,115	0/1:7,1:8:20.92:21,0,103	0/1:26,1:25:8.93:9,0,241	0/1:10,5:15:18.01:18,0,122	0/1:14,1:15:42.17:42,0,162	0/1:19,1:21:19.98:20,0,271	0/1:14,0:14:13.12:13,0,144	0/0:22,0:24:36:0,36,397	0/1:14,1:17:26.05:26,0,181	0/0:19,0:20:6.92:0,7,225
chr10	98181729	.	T	TGTGC	523.94	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=3.241;DP=565;FS=0.880;HRun=0;HaplotypeScore=93.1927;InbreedingCoeff=0.4563;MQ=58.59;MQ0=25;MQRankSum=-0.518;QD=10.27;ReadPosRankSum=1.768;VQSLOD=2.8355;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:20.73:21,0,158	0/0:6,0:6:18.01:0,18,196	0/0:62,0:16:47.04:0,47,439	0/0:76,0:22:41.98:0,42,426	0/0:13,0:13:35.71:0,36,426	0/0:19,0:18:32.12:0,32,485	0/0:22,0:22:65.48:0,65,804	0/0:24,0:24:68.23:0,68,580	0/0:10,0:10:27:0,27,288	0/0:16,0:16:39.02:0,39,489	0/0:7,0:7:17.63:0,18,172	0/0:20,0:20:50.99:0,51,571	0/0:22,0:22:25.83:0,26,514	0/0:13,0:13:32.71:0,33,306	0/0:15,0:15:44.89:0,45,518	0/0:11,0:11:19.06:0,19,206	0/0:26,0:26:62.98:0,63,743	1/1:5,15:25:33.65:601,34,0	0/1:10,0:10:16.12:16,0,170	0/0:16,0:16:35.99:0,36,381	0/0:28,0:27:59.62:0,60,643	0/0:13,0:13:19.80:0,20,225	0/0:16,0:16:36.50:0,36,454	0/0:24,0:24:49.60:0,50,638	0/0:8,0:11:26.99:0,27,291	0/0:18,0:18:27.57:0,28,322	0/0:15,0:15:41.99:0,42,481	0/0:11,0:11:26.96:0,27,410
chr10	98183217	.	T	TA	151.21	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.504;DP=491;FS=4.400;HRun=0;HaplotypeScore=56.2499;InbreedingCoeff=0.9150;MQ=71.18;MQ0=3;MQRankSum=0.030;QD=8.89;ReadPosRankSum=1.421;VQSLOD=3.3295;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:56.69:0,57,469	0/0:13,0:13:36.12:0,36,497	0/0:24,0:16:21.20:0,21,286	0/0:18,0:9:14.26:0,14,80	0/0:28,0:28:84.17:0,84,1081	0/0:26,0:26:72.23:0,72,985	0/0:10,0:10:30.07:0,30,398	0/0:22,0:22:66.18:0,66,896	0/0:15,0:15:42.58:0,43,550	0/0:29,0:29:81.27:0,81,1117	0/0:20,0:20:57.10:0,57,693	0/0:15,0:15:42.12:0,42,555	0/0:8,0:8:24.05:0,24,301	0/0:10,0:10:27.09:0,27,377	0/0:10,0:10:27.07:0,27,339	0/0:9,0:9:24.02:0,24,235	0/0:25,0:25:75.21:0,75,990	1/1:2,14:17:29.60:246,30,0	0/0:20,0:20:57.19:0,57,787	0/0:33,0:33:93.25:0,93,1200	0/0:3,0:3:9.03:0,9,126	0/0:14,0:14:39.08:0,39,520	0/0:20,0:20:59.93:0,60,709	0/0:7,0:7:21.06:0,21,275	0/0:23,0:23:69.23:0,69,963	0/0:12,0:12:32.87:0,33,311	0/0:25,0:24:75.16:0,75,984	0/0:12,0:12:36.12:0,36,501
chr10	98183218	.	T	TA	787.97	PASS	AB=0.933;AC=11;AF=0.196;AN=56;BaseQRankSum=1.062;DP=500;FS=1.187;HRun=12;HaplotypeScore=55.5395;InbreedingCoeff=0.6028;MQ=71.71;MQ0=3;MQRankSum=0.255;QD=7.23;ReadPosRankSum=2.581;VQSLOD=2.0616;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:23:28.85:413,29,0	0/0:12,0:13:31.84:0,32,223	0/1:27,0:17:17.53:18,0,21	0/0:20,0:10:8.05:0,8,41	0/0:26,2:28:15.33:0,15,420	0/0:26,0:26:68.53:0,69,499	0/1:8,1:10:6.20:6,0,114	0/0:21,1:22:45.68:0,46,363	0/0:15,0:15:17.80:0,18,130	0/0:30,0:30:59.56:0,60,434	0/0:17,0:19:46.42:0,46,314	0/0:15,0:15:35.72:0,36,256	0/1:7,1:8:5.25:5,0,128	0/0:10,0:10:26.82:0,27,194	0/0:11,0:11:25.08:0,25,173	1/1:3,2:12:17.04:85,17,0	0/0:26,0:26:58.56:0,59,412	1/1:17,0:17:30.25:263,30,0	0/0:20,0:21:43.77:0,44,311	0/0:30,0:31:73.45:0,73,519	0/0:3,0:3:8.95:0,9,66	0/0:12,0:14:25.81:0,26,175	0/0:18,1:20:20.56:0,21,296	0/0:6,0:6:16.95:0,17,115	0/0:23,0:23:56.64:0,57,416	1/1:5,7:12:0.63:154,1,0	0/0:24,1:25:32.50:0,33,391	0/0:12,0:12:35.80:0,36,263
chr10	98185453	.	CAGAGAG	C	132.02	PASS	AB=0.882;AC=6;AF=0.125;AN=48;BaseQRankSum=2.317;DP=564;FS=16.161;HRun=0;HaplotypeScore=121.1914;InbreedingCoeff=0.1371;MQ=70.95;MQ0=6;MQRankSum=0.761;QD=1.19;ReadPosRankSum=0.154;VQSLOD=1.5624;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:28:2.58:131,0,3	0/0:15,0:15:18.01:0,18,297	./.	./.	0/0:24,0:24:17.98:0,18,216	0/0:17,0:17:21.04:0,21,458	0/0:23,0:22:5.99:0,6,48	0/0:23,0:23:3.11:0,3,8	0/0:16,0:16:3:0,3,25	0/0:28,0:26:21.83:0,22,413	0/0:13,0:13:6.02:0,6,151	0/0:17,0:17:10.33:0,10,73	0/0:19,0:19:21.02:0,21,264	0/0:13,0:13:2.54:0,3,22	0/1:22,0:23:12.70:15,0,13	0/0:29,0:29:6.88:0,7,52	0/0:27,0:26:4.87:0,5,43	0/0:16,0:16:6.16:0,6,63	./.	0/0:19,0:19:8.34:0,8,53	0/0:19,0:17:9.02:0,9,108	0/0:13,0:13:11.99:0,12,101	0/0:12,0:12:6.48:0,6,88	0/1:16,8:25:16.42:43,0,16	0/0:19,0:19:14.89:0,15,312	0/1:16,0:20:15.87:34,0,16	1/1:14,0:14:6.23:24,6,0	./.
chr10	98185880	.	GGTT	G	1320.30	PASS	AB=0.933;AC=7;AF=0.125;AN=56;BaseQRankSum=7.808;DP=732;FS=8.014;HRun=0;HaplotypeScore=104.7836;InbreedingCoeff=0.7463;MQ=65.24;MQ0=4;MQRankSum=-0.179;QD=12.34;ReadPosRankSum=-0.805;VQSLOD=2.2627;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:26:34.63:0,35,339	0/0:16,0:16:0.08:0,0,415	0/0:34,0:23:16.54:0,17,298	0/0:19,0:13:8.96:0,9,136	0/0:33,0:33:69.10:0,69,1217	0/0:31,0:31:45.10:0,45,771	0/0:14,0:14:39.13:0,39,759	1/1:18,14:32:44.54:499,45,0	0/0:18,0:18:33.11:0,33,650	0/0:44,0:44:84.29:0,84,1652	0/0:26,0:26:51.17:0,51,984	0/0:30,0:30:63.20:0,63,1195	0/0:28,1:29:25.16:0,25,1162	0/0:30,0:30:60.18:0,60,1087	0/0:17,0:17:30.10:0,30,590	1/1:11,13:24:29.93:410,30,0	0/0:20,1:21:13.14:0,13,938	0/0:17,0:17:32.97:0,33,533	0/0:25,0:24:30.10:0,30,571	0/0:40,1:41:40.29:0,40,1487	0/0:20,0:20:45.14:0,45,842	0/0:27,0:27:60.21:0,60,1171	0/0:24,0:24:51.17:0,51,1000	0/0:23,0:23:55.64:0,56,1047	0/1:26,2:28:24.91:25,0,895	0/0:20,0:37:64.43:0,64,892	0/0:23,0:23:36.11:0,36,663	1/1:10,13:23:39.13:533,39,0
chr10	98186548	.	AAGGAAGGAAGGAAGGGAGGGAGGG	A	4231.49	PASS	AB=0.849;AC=5;AF=0.096;AN=52;BaseQRankSum=3.055;DP=451;FS=21.132;HRun=0;HaplotypeScore=270.1109;InbreedingCoeff=0.3241;MQ=50.46;MQ0=46;MQRankSum=2.539;QD=45.99;ReadPosRankSum=0.039;VQSLOD=2.3614;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:29:99:509,0,227	0/0:6,0:5:15.05:0,15,270	./.	./.	0/0:16,0:13:31.44:0,31,1201	0/0:17,0:12:39.13:0,39,1529	0/0:35,0:29:76.11:0,76,2202	0/0:16,0:15:29.97:0,30,409	0/0:12,0:11:27.09:0,27,1250	0/0:17,0:14:41.94:0,42,1498	0/0:15,0:14:33.98:0,34,804	0/0:12,0:11:33.09:0,33,998	0/0:21,0:19:54.17:0,54,2547	0/0:19,0:17:42.14:0,42,2130	0/0:17,0:15:45.11:0,45,1600	1/1:19,0:19:54.17:1455,54,0	0/0:14,0:12:28.40:0,28,830	0/1:8,0:5:7.93:8,0,192	0/0:6,0:2:6.01:0,6,220	0/0:13,0:13:33.11:0,33,1359	0/0:28,0:23:64.08:0,64,2234	0/0:16,0:13:31.35:0,31,867	0/0:17,0:16:37.46:0,37,1462	0/0:24,0:23:57.64:0,58,2305	0/0:15,0:13:23.27:0,23,834	0/1:6,29:33:62.58:2260,0,63	0/0:17,0:14:39.13:0,39,2008	0/0:6,0:6:18.06:0,18,1034
chr10	98187198	.	AAGAGAC	A	850.36	PASS	AB=0.575;AC=1;AF=0.018;AN=56;BaseQRankSum=7.031;DP=817;FS=13.564;HRun=0;HaplotypeScore=183.7472;InbreedingCoeff=-0.0184;MQ=65.86;MQ0=6;MQRankSum=-2.794;QD=36.97;ReadPosRankSum=-1.674;VQSLOD=1.9252;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:87.27:0,87,2422	0/0:8,0:8:24.08:0,24,813	0/0:42,0:29:31.12:0,31,1217	0/0:53,0:39:73.98:0,74,1615	0/0:32,0:32:90.29:0,90,2737	0/0:34,0:34:94.57:0,95,3133	0/0:22,0:22:63.20:0,63,1927	0/0:41,0:40:99:0,108,3203	0/0:26,0:26:69.31:0,69,2331	0/0:41,0:41:99:0,117,3654	0/0:17,0:17:48.15:0,48,1411	0/0:34,0:34:99:0,102,3242	0/0:21,0:21:63.22:0,63,1957	0/0:25,0:25:69.24:0,69,2220	0/0:34,0:34:96.31:0,96,3134	0/0:15,0:15:22.85:0,23,1256	0/0:34,0:34:78.27:0,78,2535	0/0:19,0:19:45.12:0,45,1276	0/0:22,0:19:45.13:0,45,1218	0/0:34,0:34:93.31:0,93,3017	0/0:42,0:42:99:0,105,3307	0/0:21,0:21:60.19:0,60,1865	0/0:25,0:25:72.23:0,72,2223	0/0:43,0:43:99:0,120,3903	0/0:19,0:19:54.17:0,54,1670	0/1:6,17:23:99:925,0,149	0/0:26,0:26:75.26:0,75,2487	0/0:19,0:19:54.19:0,54,1710
chr10	98189541	.	AAAAG	A	452.42	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.237;DP=671;FS=1.120;HRun=0;HaplotypeScore=106.1609;InbreedingCoeff=0.9978;MQ=61.37;MQ0=0;MQRankSum=-1.916;QD=34.80;ReadPosRankSum=1.637;VQSLOD=3.6053;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,2371	0/0:9,0:9:27.09:0,27,701	0/0:27,0:20:48.49:0,48,821	0/0:24,0:19:45.96:0,46,866	0/0:34,0:34:99:0,99,2465	0/0:24,0:24:66.22:0,66,1660	0/0:34,0:34:92.31:0,92,2251	0/0:25,0:25:57.15:0,57,1345	0/0:24,0:24:72.19:0,72,1663	0/0:32,0:32:93.30:0,93,2308	0/0:26,0:26:78.22:0,78,1744	0/0:14,0:13:39.12:0,39,897	0/0:19,0:19:57.15:0,57,1271	0/0:19,0:19:51.15:0,51,1189	0/0:26,0:26:69.17:0,69,1453	0/0:17,0:17:48.13:0,48,1101	0/0:20,0:21:29.80:0,30,1360	1/1:1,12:13:30.10:547,30,0	0/0:20,0:20:57.15:0,57,1217	0/0:22,0:22:66.15:0,66,1311	0/0:14,0:14:42.14:0,42,1079	0/0:27,0:27:76.49:0,76,1814	0/0:33,0:33:96.32:0,96,2402	0/0:23,0:24:69.15:0,69,1665	0/0:30,0:30:87.26:0,87,2038	0/0:25,0:24:69.22:0,69,1742	0/0:32,0:32:93.26:0,93,2145	0/0:19,0:19:51.09:0,51,1264
chr10	98189724	.	TAC	T	495.17	PASS	AB=0.901;AC=12;AF=0.222;AN=54;BaseQRankSum=2.156;DP=581;FS=5.463;HRun=0;HaplotypeScore=82.7526;InbreedingCoeff=-0.3426;MQ=61.68;MQ0=5;MQRankSum=-1.616;QD=1.97;ReadPosRankSum=1.972;VQSLOD=1.2691;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:15.50:0,15,165	0/0:5,0:5:5.81:0,6,59	./.	0/0:22,0:15:3.01:0,3,46	0/0:19,0:20:24.07:0,24,326	0/0:18,2:21:2.30:0,2,426	0/1:29,6:36:36.69:37,0,470	0/1:19,0:20:22.73:23,0,222	0/0:15,2:17:13.86:0,14,183	0/0:7,0:13:17.52:0,18,157	0/0:9,0:13:9.01:0,9,98	0/1:21,1:22:97.37:97,0,308	0/1:10,5:15:55.03:55,0,80	0/0:16,0:16:14.78:0,15,233	0/1:14,1:15:12.77:13,0,224	0/0:13,0:13:2.94:0,3,26	0/1:25,4:30:67.41:67,0,414	0/0:24,0:22:21.90:0,22,216	0/1:23,1:24:12.87:13,0,201	0/0:20,0:20:20.97:0,21,268	0/1:30,2:35:99:163,0,420	0/1:14,0:14:40.13:40,0,279	0/1:12,1:13:41.05:41,0,162	0/0:36,0:34:48.22:0,48,679	0/1:16,3:19:59.22:59,0,398	0/0:15,0:22:24.81:0,25,156	0/0:26,5:31:1.88:0,2,400	0/1:7,1:8:29.78:30,0,165
chr10	98191966	.	GGT	G	1162.38	PASS	AB=0.908;AC=27;AF=0.519;AN=52;BaseQRankSum=7.788;DP=676;FS=3.950;HRun=0;HaplotypeScore=103.7225;InbreedingCoeff=-0.0611;MQ=64.25;MQ0=16;MQRankSum=-2.436;QD=2.23;ReadPosRankSum=1.147;VQSLOD=2.1192;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:36:4.91:58,5,0	0/1:12,2:14:44.24:44,0,176	./.	./.	0/1:23,0:23:3.78:4,0,312	0/0:24,3:27:0.49:0,0,365	0/1:23,0:23:4.30:4,0,274	0/0:33,0:33:6.02:0,6,80	0/1:33,1:36:3.75:4,0,616	1/1:21,11:32:32.56:307,33,0	0/1:9,8:17:6.96:115,0,7	0/1:27,3:30:8.57:9,0,267	0/1:20,1:21:8.56:9,0,223	1/1:10,9:22:26.57:237,27,0	0/1:24,0:25:2.72:3,0,369	1/1:8,0:29:28.41:140,28,0	0/1:25,2:27:32.33:32,0,447	0/1:16,1:22:2.08:69,0,2	0/1:18,0:18:20.71:21,0,90	0/1:22,2:23:23.60:24,0,272	0/1:23,2:23:2.71:3,0,306	0/1:28,3:31:23.07:23,0,444	0/0:18,0:18:24.03:0,24,299	0/0:21,2:23:9.11:0,9,471	1/1:11,9:20:9.02:98,9,0	1/1:2,0:17:17.04:84,17,0	0/1:22,3:25:34.90:35,0,285	0/0:17,0:15:23.99:0,24,312
chr10	98194315	.	TAA	T	1714.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.118;DP=584;FS=6.080;HRun=2;HaplotypeScore=68.5840;InbreedingCoeff=0.9878;MQ=61.98;MQ0=1;MQRankSum=-0.308;QD=40.83;ReadPosRankSum=1.799;VQSLOD=3.4516;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,41:42:99:1810,111,0	0/0:7,0:7:21.07:0,21,427	0/0:28,0:28:66.20:0,66,1374	0/0:21,0:19:35.28:0,35,1042	0/0:21,0:21:63.19:0,63,1241	0/0:24,0:24:69.24:0,69,1392	0/0:21,0:21:63.21:0,63,1245	0/0:38,0:37:99:0,114,2216	0/0:24,0:24:72.21:0,72,1377	0/0:20,0:20:60.19:0,60,1183	0/0:15,0:15:42.13:0,42,810	0/0:19,0:19:57.18:0,57,1113	0/0:17,0:17:48.16:0,48,975	0/0:18,0:18:54.19:0,54,1097	0/0:17,0:17:51.16:0,51,996	0/0:17,0:17:51.14:0,51,920	0/0:21,0:20:63.22:0,63,1250	0/0:28,0:28:81.28:0,81,1624	0/0:25,0:25:75.25:0,75,1483	0/0:15,0:15:42.14:0,42,819	0/0:27,0:27:81.26:0,81,1608	0/0:7,0:7:21.07:0,21,394	0/0:19,0:19:57.19:0,57,1123	0/0:21,0:21:60.08:0,60,1105	0/0:18,0:18:51.09:0,51,957	0/0:20,0:20:60.19:0,60,1182	0/0:27,0:27:81.26:0,81,1607	0/0:7,0:7:21.07:0,21,426
chr10	98195817	.	AT	A	758.93	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=6.845;DP=543;FS=1.748;HRun=2;HaplotypeScore=59.0292;InbreedingCoeff=0.8215;MQ=52.72;MQ0=55;MQRankSum=-0.597;QD=24.48;ReadPosRankSum=2.183;VQSLOD=3.6083;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:60.20:0,60,890	0/0:7,0:6:18.06:0,18,270	./.	0/0:28,0:5:15.02:0,15,192	0/0:15,0:15:36.12:0,36,536	0/0:13,0:11:33.08:0,33,454	0/0:28,0:26:69.21:0,69,1011	0/0:25,0:14:42.14:0,42,610	0/0:25,0:25:75.25:0,75,1123	0/0:15,0:14:42.14:0,42,629	0/0:4,0:4:9.03:0,9,135	0/0:25,0:25:75.23:0,75,1099	0/0:24,0:24:69.23:0,69,1029	0/0:30,0:30:84.09:0,84,1258	0/0:22,0:22:63.20:0,63,923	0/0:19,0:19:51.17:0,51,764	0/0:33,0:33:99:0,99,1437	1/1:1,30:31:33.27:853,33,0	0/0:13,0:7:21.07:0,21,304	0/0:7,0:7:21.07:0,21,313	0/0:41,0:40:99:0,99,1393	0/0:11,0:8:24.08:0,24,360	0/0:7,0:7:15.01:0,15,200	0/0:24,0:24:72.24:0,72,1079	0/0:9,0:9:27.08:0,27,382	0/0:18,0:17:51.17:0,51,764	0/0:17,0:16:48.15:0,48,696	0/0:2,0:2:6:0,6,69
chr10	98198623	.	T	TA	843.11	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.451;DP=459;FS=2.808;HRun=8;HaplotypeScore=43.1042;InbreedingCoeff=0.7575;MQ=65.35;MQ0=0;MQRankSum=1.326;QD=28.10;ReadPosRankSum=0.509;VQSLOD=4.0284;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:30:81.24:938,81,0	0/0:7,0:7:21.01:0,21,192	0/0:7,0:5:8.70:0,9,66	0/0:12,0:7:1.08:0,1,13	0/0:19,0:19:47.98:0,48,427	0/0:17,0:17:48.01:0,48,436	0/0:16,0:16:41.98:0,42,372	0/0:34,0:34:77.93:0,78,696	0/0:8,0:8:17.98:0,18,161	0/0:23,0:23:63.02:0,63,572	0/0:21,0:21:53.98:0,54,482	0/0:13,0:13:35.99:0,36,321	0/0:10,0:10:27.01:0,27,247	0/0:9,0:9:24.01:0,24,217	0/0:13,0:13:36:0,36,322	0/0:13,0:13:30.01:0,30,274	0/0:27,0:27:80.99:0,81,725	0/0:29,0:29:72.03:0,72,658	0/0:22,0:22:60.01:0,60,543	0/0:19,0:19:57.03:0,57,521	0/0:8,0:8:23.97:0,24,203	0/0:5,0:5:15:0,15,135	0/0:8,0:8:24:0,24,216	0/0:9,0:9:24.01:0,24,220	0/0:22,0:22:63.01:0,63,567	0/0:22,0:22:63.02:0,63,567	0/0:11,0:11:29.98:0,30,265	0/0:25,0:25:71.98:0,72,641
chr10	98205622	.	CT	C	1586.62	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.553;DP=641;FS=8.087;HRun=2;HaplotypeScore=82.2486;InbreedingCoeff=0.9986;MQ=77.25;MQ0=0;MQRankSum=-9.276;QD=30.51;ReadPosRankSum=1.023;VQSLOD=2.7450;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:50.65:659,51,0	0/0:10,0:10:30.09:0,30,430	0/0:19,0:19:54.18:0,54,781	0/0:17,0:17:48.12:0,48,666	0/0:19,0:19:54.18:0,54,809	0/0:15,0:15:45.02:0,45,620	0/0:19,0:19:54.14:0,54,782	0/0:25,0:25:72.24:0,72,1079	0/0:24,0:24:72.23:0,72,1058	0/0:23,0:23:66.22:0,66,973	0/0:14,0:14:39.08:0,39,540	0/0:34,0:34:96.33:0,96,1437	0/0:33,0:33:96.31:0,96,1407	0/0:22,0:22:66.22:0,66,987	0/0:25,0:25:72.24:0,72,1058	1/1:3,25:28:81.26:1049,81,0	0/0:38,0:38:99:0,114,1636	0/0:20,0:20:54.18:0,54,809	0/0:24,0:24:69.22:0,69,998	0/0:22,0:22:66.22:0,66,988	0/0:44,0:44:99:0,132,1954	0/0:17,0:17:51.16:0,51,736	0/0:17,0:17:48.14:0,48,680	0/0:28,0:28:81.24:0,81,1172	0/0:15,0:15:45.15:0,45,673	0/0:26,0:26:72.24:0,72,1079	0/0:31,0:31:93.31:0,93,1372	0/0:8,0:8:24.08:0,24,360
chr10	98205636	.	A	ACTT	2793.25	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.237;DP=643;FS=1.157;HRun=0;HaplotypeScore=113.4685;InbreedingCoeff=0.9945;MQ=82.02;MQ0=0;MQRankSum=-10.053;QD=51.73;ReadPosRankSum=-0.068;VQSLOD=5.3641;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,16:26:63.31:1037,63,0	0/0:9,0:9:27.09:0,27,459	0/0:22,0:22:54.09:0,54,807	0/0:22,0:22:33.55:0,34,928	0/0:21,0:21:60.20:0,60,1035	0/0:15,0:15:45.14:0,45,752	0/0:21,0:21:57.20:0,57,1005	0/0:23,0:23:66.23:0,66,1161	0/0:26,0:26:72.23:0,72,1241	0/0:22,0:22:66.21:0,66,1112	0/0:10,0:10:27.08:0,27,448	0/0:32,0:32:90.27:0,90,1498	0/0:32,0:32:93.32:0,93,1635	0/0:23,0:23:69.23:0,69,1185	0/0:25,0:25:69.23:0,69,1174	1/1:4,24:28:84.22:1878,84,0	0/0:39,0:39:99:0,108,1871	0/0:21,0:21:59.92:0,60,506	0/0:20,0:20:51.15:0,51,839	0/0:24,0:24:69.20:0,69,1127	0/0:47,0:47:99:0,138,2297	0/0:18,0:18:45.14:0,45,748	0/0:15,0:15:39.09:0,39,604	0/0:27,0:27:75.26:0,75,1313	0/0:12,0:12:33.09:0,33,526	0/0:26,0:26:66.23:0,66,1158	0/0:30,0:30:87.28:0,87,1504	0/0:7,0:7:18.05:0,18,279
chr10	98205887	.	CA	C	1083.76	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.974;DP=804;FS=6.961;HRun=2;HaplotypeScore=76.4978;InbreedingCoeff=0.9831;MQ=85.74;MQ0=0;MQRankSum=-2.621;QD=32.84;ReadPosRankSum=-0.060;VQSLOD=3.2977;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,160,2361	0/0:10,0:10:30.06:0,30,408	0/0:23,0:23:63.21:0,63,932	0/0:28,0:28:74.28:0,74,1072	0/0:34,0:33:99:0,99,1458	0/0:23,0:23:69.23:0,69,1034	0/0:26,0:26:78.23:0,78,1145	0/0:32,0:32:96.33:0,96,1438	0/0:29,0:29:84.28:0,84,1259	0/0:40,0:40:99:0,120,1798	0/0:22,0:22:66.22:0,66,987	0/0:37,0:37:99:0,111,1632	0/0:37,0:37:99:0,111,1662	0/0:30,0:30:90.30:0,90,1349	0/0:47,0:47:99:0,141,2111	0/0:36,0:36:99:0,108,1600	0/0:36,0:36:99:0,105,1551	0/0:17,0:17:48.08:0,48,663	0/0:25,0:25:75.25:0,75,1104	0/0:25,0:25:75.25:0,75,1123	0/0:33,0:33:90.30:0,90,1349	0/0:25,0:25:72.24:0,72,1065	0/0:17,0:17:51.16:0,51,740	0/0:22,0:22:66.22:0,66,989	0/0:29,0:29:87.29:0,87,1303	1/1:1,32:33:93.27:1179,93,0	0/0:29,0:29:84.26:0,84,1235	0/0:6,0:6:14.80:0,15,225
chr10	98206512	.	A	AT	4196.69	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-10.892;DP=798;FS=1.636;HRun=6;HaplotypeScore=80.9096;InbreedingCoeff=0.9999;MQ=73.93;MQ0=0;MQRankSum=-1.658;QD=30.63;ReadPosRankSum=-0.226;VQSLOD=3.9304;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,45:51:99:1591,102,0	0/0:12,0:12:36.08:0,36,367	0/0:31,0:27:39.87:0,40,525	0/0:29,0:28:49.14:0,49,518	0/0:23,0:23:63.11:0,63,630	0/0:23,0:23:63.14:0,63,642	0/0:26,0:26:48.38:0,48,679	1/1:9,26:35:75.19:900,75,0	0/0:31,0:31:84.19:0,84,857	0/0:28,0:28:69.15:0,69,704	0/0:19,0:19:48.11:0,48,489	0/0:28,0:28:84.19:0,84,856	0/0:28,0:28:75.15:0,75,757	0/0:39,0:39:99:0,114,1162	0/0:42,0:42:99:0,114,1149	1/1:3,32:35:65.69:1139,66,0	0/0:40,0:40:99:0,111,1116	0/0:41,0:41:79.10:0,79,977	0/0:30,0:30:87.19:0,87,886	0/0:26,0:26:72.13:0,72,726	0/0:27,0:27:78.14:0,78,786	0/0:19,0:19:51.11:0,51,520	0/0:24,0:24:63.13:0,63,636	0/0:26,0:26:72.16:0,72,733	0/0:23,0:23:66.15:0,66,673	0/0:18,0:18:51.11:0,51,520	0/0:28,0:28:72.16:0,72,734	1/1:0,16:16:45.14:566,45,0
chr10	98206613	.	C	CA	5432.30	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-9.982;DP=751;FS=4.411;HRun=0;HaplotypeScore=71.4348;InbreedingCoeff=0.9999;MQ=89.84;MQ0=0;MQRankSum=-1.611;QD=39.36;ReadPosRankSum=-0.770;VQSLOD=5.0172;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,41:48:99:1986,126,0	0/0:15,0:15:45.14:0,45,611	0/0:30,0:30:86.85:0,87,1126	0/0:28,0:29:74.10:0,74,959	0/0:27,0:27:78.26:0,78,1088	0/0:26,0:26:75.20:0,75,1022	0/0:26,0:26:78.23:0,78,1053	1/1:3,33:36:93.29:1422,93,0	0/0:25,0:25:75.22:0,75,1027	0/0:26,0:26:75.24:0,75,1022	0/0:20,0:20:54.18:0,54,754	0/0:29,0:29:87.25:0,87,1194	0/0:26,0:26:78.22:0,78,1051	0/0:29,0:29:87.27:0,87,1197	0/0:36,0:36:99:0,105,1445	1/1:0,22:22:51.11:780,51,0	0/0:33,0:33:99:0,99,1343	1/1:0,18:18:45.15:719,45,0	0/0:17,0:17:51.15:0,51,680	0/0:21,0:21:60.19:0,60,823	0/0:53,0:53:99:0,157,2158	0/0:17,0:17:51.17:0,51,712	0/0:18,0:18:48.15:0,48,653	0/0:35,0:35:99:0,105,1436	0/0:27,0:27:75.23:0,75,1019	0/0:27,0:27:81.25:0,81,1102	0/0:21,0:21:63.18:0,63,844	1/1:3,11:14:33.11:526,33,0
chr10	98206854	.	ACATATGT	A	6661.59	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.156;DP=793;FS=3.033;HRun=0;HaplotypeScore=182.9890;InbreedingCoeff=0.9958;MQ=85.47;MQ0=0;MQRankSum=-13.671;QD=57.93;ReadPosRankSum=-0.446;VQSLOD=4.3253;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:28:60.21:1519,60,0	0/0:15,0:15:42.14:0,42,1579	0/0:24,0:24:39.83:0,40,2017	0/0:30,0:30:75.16:0,75,2448	0/0:15,0:15:42.14:0,42,1647	0/0:12,0:12:36.11:0,36,1313	0/0:34,0:34:90.28:0,90,3284	1/1:5,25:30:78.25:1872,78,0	0/0:38,0:38:99:0,111,4223	0/0:28,0:28:84.28:0,84,3244	0/0:23,0:23:63.20:0,63,2360	0/0:51,0:51:99:0,144,5581	0/0:39,0:39:99:0,117,4285	0/0:32,0:32:96.33:0,96,3754	0/0:55,0:55:99:0,166,6373	1/1:4,34:38:87.30:2258,87,0	0/0:31,0:31:90.28:0,90,3466	1/1:3,11:14:24.08:623,24,0	0/0:26,0:26:72.25:0,72,2786	0/0:31,0:31:90.28:0,90,3498	0/0:46,0:46:99:0,132,4970	0/0:22,0:22:60.21:0,60,2280	0/0:16,0:16:48.15:0,48,1756	0/0:29,0:29:87.28:0,87,3287	0/0:21,0:21:60.21:0,60,2238	0/0:29,0:29:84.29:0,84,3273	0/0:31,0:31:93.28:0,93,3523	1/1:0,5:5:15.05:389,15,0
chr10	98207460	.	GTCCGTTTAGCC	G	6122.58	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.843;DP=750;FS=6.275;HRun=0;HaplotypeScore=235.4860;InbreedingCoeff=0.9789;MQ=85.42;MQ0=1;MQRankSum=-10.314;QD=80.56;ReadPosRankSum=-2.634;VQSLOD=3.1603;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,29:34:87.25:2877,87,0	0/0:12,0:12:36.12:0,36,2077	0/0:32,0:31:87.30:0,87,4603	0/0:31,0:31:80.54:0,81,4394	0/0:30,0:30:87.27:0,87,4302	0/0:21,0:21:57.18:0,57,3024	0/0:33,0:33:99:0,99,5341	1/1:6,30:36:90.29:2925,90,0	0/0:29,0:29:87.30:0,87,4561	0/0:23,0:23:66.23:0,66,3608	0/0:20,0:20:60.21:0,60,3351	0/0:26,0:26:75.26:0,75,4117	0/0:30,0:30:90.31:0,90,4869	0/0:20,0:20:60.21:0,60,3030	0/0:42,0:42:99:0,114,6281	0/0:27,0:27:78.27:0,78,4327	0/0:34,0:34:99:0,102,5614	0/0:27,0:27:81.25:0,81,4438	0/0:21,0:21:60.20:0,60,2904	0/0:29,0:29:87.30:0,87,4645	0/0:21,0:21:54.19:0,54,2987	0/0:24,0:24:72.25:0,72,3957	0/0:26,0:26:75.24:0,75,4042	0/0:32,0:32:96.33:0,96,5315	0/0:32,0:32:93.32:0,93,5168	0/0:21,0:21:63.22:0,63,3343	0/0:31,0:31:90.30:0,90,4873	1/1:1,5:5:9.03:321,9,0
chr10	98208963	.	A	ATTT	1454.39	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.744;DP=634;FS=1.141;HRun=9;HaplotypeScore=93.8882;InbreedingCoeff=0.9438;MQ=63.45;MQ0=2;MQRankSum=-1.574;QD=15.98;ReadPosRankSum=-0.513;VQSLOD=1.1293;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:37:83.16:625,83,0	0/0:12,0:13:31.65:0,32,414	0/0:12,0:11:9.30:0,9,206	0/0:15,0:9:17.80:0,18,191	0/0:25,0:26:73.80:0,74,932	0/0:19,0:19:51.16:0,51,644	0/0:25,0:25:66.15:0,66,818	1/1:13,12:27:50.69:779,51,0	0/0:20,0:20:48.08:0,48,592	0/0:32,0:32:87.24:0,87,1099	0/0:21,0:21:57.16:0,57,705	0/0:28,0:28:74.79:0,75,905	0/0:30,0:30:71.39:0,71,908	0/0:25,0:25:63.18:0,63,795	0/0:22,0:23:51.02:0,51,624	0/0:30,0:30:78.18:0,78,953	0/0:35,0:35:96.24:0,96,1194	1/1:4,0:18:25.90:85,26,0	0/0:14,0:14:42.09:0,42,512	0/0:33,0:33:66.07:0,66,805	0/0:4,0:4:12.04:0,12,152	0/0:16,0:16:36.01:0,36,423	0/0:14,0:14:35.99:0,36,406	0/0:27,0:27:62.63:0,63,862	0/0:15,0:15:36.09:0,36,442	0/0:38,0:38:96.22:0,96,1177	0/0:28,0:28:81.23:0,81,995	1/1:0,7:8:6.02:118,6,0
chr10	98210531	.	GA	G	1207.45	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.710;DP=627;FS=5.113;HRun=1;HaplotypeScore=62.5033;InbreedingCoeff=0.9906;MQ=76.81;MQ0=0;MQRankSum=-0.196;QD=33.54;ReadPosRankSum=-3.567;VQSLOD=2.1919;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,100,1539	0/0:11,0:11:30.10:0,30,474	0/0:15,0:15:41.97:0,42,539	0/0:13,0:13:35.66:0,36,425	0/0:18,0:18:54.17:0,54,831	0/0:28,0:28:84.21:0,84,1254	0/0:24,0:24:69.22:0,69,1063	1/1:0,30:30:90.21:1139,90,0	0/0:28,0:28:81.24:0,81,1235	0/0:30,0:30:90.29:0,90,1374	0/0:19,0:19:57.18:0,57,881	0/0:31,0:31:93.25:0,93,1356	0/0:26,0:26:78.19:0,78,1121	0/0:25,0:25:67.61:0,68,1019	0/0:32,0:32:96.31:0,96,1500	0/0:17,0:17:51.17:0,51,810	0/0:24,0:24:69.19:0,69,1022	0/0:31,0:31:86.56:0,87,1325	0/0:16,0:16:48.12:0,48,690	0/0:16,0:16:28.65:0,29,667	0/0:10,0:10:30.09:0,30,449	0/0:21,0:21:63.19:0,63,952	0/0:19,0:19:57.18:0,57,877	0/0:12,0:12:33.08:0,33,476	0/0:25,0:25:75.24:0,75,1166	0/0:34,0:34:99:0,102,1576	0/0:31,0:29:93.27:0,93,1401	1/1:0,5:6:15.02:187,15,0
chr10	98216094	.	GCC	G	1802.80	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=10.913;DP=741;FS=1.211;HRun=2;HaplotypeScore=99.3153;InbreedingCoeff=0.9970;MQ=86.59;MQ0=0;MQRankSum=-4.034;QD=37.56;ReadPosRankSum=2.637;VQSLOD=3.8771;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,46:48:99:1898,129,0	0/0:8,0:8:24.08:0,24,488	0/0:25,0:25:66.52:0,67,1294	0/0:24,0:24:71.89:0,72,1295	0/0:25,0:25:75.26:0,75,1523	0/0:23,0:23:69.24:0,69,1401	0/0:30,0:30:90.31:0,90,1805	0/0:34,0:34:99:0,102,2053	0/0:21,0:21:63.22:0,63,1278	0/0:38,0:38:99:0,114,2239	0/0:26,0:26:78.27:0,78,1577	0/0:34,0:34:99:0,102,2055	0/0:21,0:21:60.21:0,60,1218	0/0:25,0:25:75.26:0,75,1521	0/0:29,0:28:87.30:0,87,1761	0/0:34,0:34:99:0,102,2051	0/0:42,0:42:99:0,126,2546	0/0:30,0:30:87.20:0,87,1626	0/0:20,0:20:60.21:0,60,1218	0/0:20,0:20:57.20:0,57,1147	0/0:36,0:36:99:0,108,2182	0/0:25,0:25:75.26:0,75,1522	0/0:18,0:18:51.17:0,51,1018	0/0:34,0:34:99:0,102,2035	0/0:15,0:15:45.15:0,45,914	0/0:24,0:24:72.25:0,72,1463	0/0:23,0:22:69.24:0,69,1397	0/0:9,0:9:27.09:0,27,548
chr10	98216498	.	A	AG	1837.31	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-2.764;DP=599;FS=1.127;HRun=4;HaplotypeScore=69.7636;InbreedingCoeff=0.9970;MQ=87.25;MQ0=0;MQRankSum=-0.005;QD=28.27;ReadPosRankSum=-0.687;VQSLOD=2.7603;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:69.23:937,69,0	0/0:14,0:14:42.12:0,42,476	0/0:36,0:34:50.86:0,51,756	0/0:32,0:29:70.68:0,71,766	0/0:17,0:17:51.15:0,51,577	0/0:22,0:22:63.12:0,63,688	0/0:18,0:18:51.13:0,51,568	1/1:4,21:25:60.16:796,60,0	0/0:27,0:27:75.21:0,75,850	0/0:20,0:20:54.15:0,54,613	0/0:12,0:12:36.10:0,36,404	0/0:22,0:22:63.16:0,63,704	0/0:25,0:25:69.20:0,69,782	0/0:15,0:15:45.13:0,45,510	0/0:19,0:19:51.13:0,51,569	0/0:16,0:16:48.14:0,48,544	0/0:26,0:26:78.22:0,78,885	0/0:21,0:21:60.17:0,60,681	0/0:22,0:22:54.15:0,54,611	0/0:22,0:22:60.17:0,60,676	0/0:21,0:21:57.16:0,57,646	0/0:24,0:24:66.18:0,66,744	0/0:17,0:17:48.14:0,48,543	0/0:27,0:27:69.15:0,69,768	0/0:19,0:19:57.15:0,57,636	0/0:20,0:20:60.16:0,60,670	0/0:20,0:20:57.16:0,57,646	1/1:1,13:14:18.06:246,18,0
chr10	98216845	.	A	ACGGGAGGAATCTTT	8956.67	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=0.043;DP=694;FS=0.521;HRun=0;HaplotypeScore=254.8740;InbreedingCoeff=0.9695;MQ=81.57;MQ0=0;MQRankSum=-10.639;QD=72.82;ReadPosRankSum=-5.425;VQSLOD=3.2544;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:27.09:1609,27,0	0/0:12,0:12:30.10:0,30,1164	0/0:18,0:18:33.01:0,33,856	0/0:22,0:22:42.07:0,42,1260	0/0:15,0:15:33.11:0,33,1272	0/0:22,0:22:54.16:0,54,2052	0/0:32,0:31:75.26:0,75,2921	1/1:57,0:57:84.28:4310,84,0	0/0:38,0:38:99:0,99,3611	0/0:25,0:25:46.24:0,46,2164	0/0:15,0:15:36.11:0,36,1278	0/0:29,0:29:66.23:0,66,2457	0/0:24,0:24:60.19:0,60,2244	0/0:26,0:26:57.18:0,57,2084	0/0:30,0:30:84.25:0,84,2896	1/1:12,10:24:45.15:2759,45,0	0/0:21,0:21:48.13:0,48,1734	0/0:32,0:32:87.30:0,87,3211	0/0:22,0:22:45.15:0,45,1732	0/0:24,0:24:63.22:0,63,2513	0/0:28,0:28:66.23:0,66,2464	0/0:23,0:23:57.18:0,57,2124	0/0:15,0:15:36.12:0,36,1440	0/0:26,0:25:63.20:0,63,2435	0/0:17,0:17:42.14:0,42,1500	0/0:23,0:23:60.21:0,60,2245	0/0:32,0:32:87.27:0,87,3060	1/1:11,0:11:6.02:278,6,0
chr10	98216851	.	G	GGAATCTTTCGGGAA	12442.23	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.132;DP=710;FS=0.420;HRun=0;HaplotypeScore=262.2656;InbreedingCoeff=0.9238;MQ=80.54;MQ0=0;MQRankSum=-13.222;QD=92.85;ReadPosRankSum=-2.892;VQSLOD=3.9910;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,9:40:48.16:2768,48,0	0/0:14,0:14:33.10:0,33,1208	0/0:17,0:17:35.23:0,35,1008	0/0:22,0:22:51.09:0,51,1405	0/0:15,0:15:42.11:0,42,1383	0/0:22,0:22:57.16:0,57,2129	0/0:31,0:30:81.26:0,81,3043	1/1:57,0:57:33.55:5921,34,0	0/0:38,0:38:99:0,108,3922	0/0:23,0:23:64.10:0,64,2310	0/0:15,0:15:39.11:0,39,1346	0/0:25,0:25:69.24:0,69,2644	0/0:26,0:26:69.20:0,69,2408	0/0:29,0:29:69.19:0,69,2247	0/0:29,0:29:87.29:0,87,3086	1/1:26,0:26:30.20:2826,30,0	0/0:18,0:18:48.16:0,48,1808	0/0:34,0:34:99:0,99,3416	0/0:23,0:23:54.14:0,54,1953	0/0:23,0:23:63.22:0,63,2552	0/0:28,0:28:75.20:0,75,2667	0/0:23,0:23:57.20:0,57,2181	0/0:15,0:15:36.12:0,36,1462	0/0:29,0:28:81.20:0,81,2650	0/0:19,0:19:51.13:0,51,1675	0/0:25,0:25:66.20:0,66,2330	0/0:33,0:33:93.27:0,93,3250	1/1:11,0:11:0.13:927,0,0
chr10	98219713	.	TCCAGAGCTGTGAGATGCAGGAGA	T	1490.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.391;DP=778;FS=9.611;HRun=0;HaplotypeScore=431.1262;InbreedingCoeff=0.9985;MQ=79.58;MQ0=0;MQRankSum=-5.411;QD=34.66;ReadPosRankSum=-0.120;VQSLOD=0.5698;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,27:43:30.57:1585,31,0	0/0:13,0:13:39.13:0,39,3534	0/0:17,0:18:48.16:0,48,3288	0/0:26,0:26:68.76:0,69,5162	0/0:25,0:25:75.24:0,75,7122	0/0:26,0:26:78.27:0,78,8075	0/0:26,0:26:75.24:0,75,6211	0/0:37,0:37:99:0,108,8864	0/0:37,0:37:99:0,111,10095	0/0:42,0:42:99:0,123,10868	0/0:23,0:23:69.24:0,69,7269	0/0:40,0:40:99:0,120,11846	0/0:22,0:22:63.22:0,63,5972	0/0:31,0:31:93.32:0,93,8514	0/0:37,0:37:99:0,111,11199	0/0:26,0:26:78.27:0,78,7869	0/0:30,0:30:87.30:0,87,8622	0/0:22,0:22:63.22:0,63,6361	0/0:22,0:22:65.96:0,66,4614	0/0:27,0:27:81.28:0,81,7958	0/0:30,0:30:84.29:0,84,8361	0/0:29,0:29:84.29:0,84,8841	0/0:25,0:25:75.26:0,75,7253	0/0:28,0:28:81.28:0,81,7912	0/0:31,0:31:93.32:0,93,9019	0/0:25,0:25:75.26:0,75,7447	0/0:27,0:27:81.28:0,81,8121	0/0:9,0:9:27.09:0,27,2961
chr10	98222011	.	CTCA	C	1804.90	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.986;DP=713;FS=1.314;HRun=0;HaplotypeScore=114.5370;InbreedingCoeff=0.9989;MQ=87.39;MQ0=0;MQRankSum=-9.548;QD=46.28;ReadPosRankSum=-2.237;VQSLOD=4.7910;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,2465	0/0:16,0:16:48.16:0,48,1133	0/0:25,0:25:72.25:0,72,1684	0/0:25,0:25:72.19:0,72,1477	0/0:23,0:23:69.22:0,69,1563	0/0:16,0:16:48.16:0,48,1109	0/0:24,0:24:72.23:0,72,1633	1/1:1,30:31:87.28:1503,87,0	0/0:31,0:31:93.32:0,93,2197	0/0:34,0:34:99:0,102,2399	0/0:15,0:15:42.14:0,42,973	0/0:34,0:34:99:0,102,2369	0/0:30,0:30:87.28:0,87,1996	0/0:24,0:24:72.23:0,72,1655	0/0:27,0:27:81.25:0,81,1761	0/0:24,0:24:72.25:0,72,1674	0/0:32,0:32:96.33:0,96,2236	0/0:33,0:33:93.31:0,93,2113	0/0:17,0:17:51.17:0,51,1162	0/0:22,0:22:66.23:0,66,1522	0/0:42,0:42:99:0,123,2859	0/0:16,0:16:48.15:0,48,1068	0/0:16,0:16:39.13:0,39,921	0/0:34,0:34:99:0,102,2336	0/0:28,0:28:84.27:0,84,1933	0/0:28,0:28:81.27:0,81,1847	0/0:22,0:22:66.23:0,66,1561	1/1:0,8:8:24.08:423,24,0
chr10	98224689	.	G	GT	1623.53	PASS	AB=0.887;AC=10;AF=0.179;AN=56;BaseQRankSum=10.089;DP=533;FS=0.000;HRun=9;HaplotypeScore=61.4903;InbreedingCoeff=0.7348;MQ=75.68;MQ0=2;MQRankSum=-1.585;QD=15.92;ReadPosRankSum=-1.790;VQSLOD=3.2817;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:18:22.44:201,22,0	0/1:4,1:5:18.18:18,0,89	0/0:27,0:20:12.75:0,13,169	0/1:15,1:13:14.69:15,0,84	0/0:28,0:29:57.73:0,58,600	0/0:19,0:19:56.99:0,57,495	0/0:13,0:13:35.99:0,36,312	1/1:7,18:25:54.14:589,54,0	0/0:16,0:16:47.99:0,48,417	0/0:21,0:21:56.98:0,57,495	0/0:16,0:16:35.97:0,36,312	0/0:13,0:13:35.99:0,36,312	0/0:17,0:17:44.98:0,45,391	0/0:19,0:19:53.97:0,54,465	0/0:22,0:22:53.98:0,54,469	1/1:4,12:16:43.34:455,43,0	0/0:18,0:18:41.96:0,42,360	0/0:29,0:29:68.95:0,69,599	0/0:27,0:27:38.01:0,38,540	0/0:24,0:24:40.02:0,40,473	0/0:2,0:2:6:0,6,52	0/0:13,0:13:35.98:0,36,313	0/0:22,0:22:59.95:0,60,515	0/0:15,0:15:41.97:0,42,361	0/0:22,0:22:59.98:0,60,521	0/0:16,0:16:26.32:0,26,321	0/0:31,0:31:77.97:0,78,677	1/1:5,17:22:50.74:513,51,0
chr10	98224699	.	G	GT	1351.80	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.190;DP=542;FS=1.200;HRun=9;HaplotypeScore=61.6032;InbreedingCoeff=0.9720;MQ=73.57;MQ0=2;MQRankSum=-4.002;QD=21.80;ReadPosRankSum=-0.858;VQSLOD=4.0205;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:53.48:0,53,391	0/0:8,0:8:20.88:0,21,180	0/0:26,0:19:27.78:0,28,320	0/0:13,0:10:14.98:0,15,131	0/0:31,0:31:92.85:0,93,824	0/0:21,0:21:54.02:0,54,494	0/0:16,0:16:36.01:0,36,329	1/1:11,11:22:42.52:490,43,0	0/0:18,0:18:51.01:0,51,458	0/0:20,0:20:54.02:0,54,491	0/0:15,0:15:42.01:0,42,379	0/0:15,0:15:39.01:0,39,353	0/0:18,0:18:45.01:0,45,411	0/0:21,0:21:60:0,60,541	0/0:20,0:20:54.03:0,54,493	1/1:1,16:17:39.11:447,39,0	0/0:16,0:16:45.02:0,45,411	0/0:29,0:29:74.94:0,75,659	0/0:34,0:34:84.01:0,84,761	0/0:24,0:24:63.03:0,63,576	0/0:3,0:3:9:0,9,82	0/0:13,0:13:39.02:0,39,357	0/0:19,0:19:57.03:0,57,522	0/0:15,0:15:39:0,39,352	0/0:21,0:21:57.03:0,57,521	0/0:17,0:17:38.96:0,39,353	0/0:28,0:28:78.03:0,78,713	1/1:6,16:23:49.95:557,50,0
chr10	98226061	.	TTC	T	228.30	PASS	AB=0.887;AC=12;AF=0.214;AN=56;BaseQRankSum=3.165;DP=532;FS=4.104;HRun=0;HaplotypeScore=74.2571;InbreedingCoeff=-0.3155;MQ=73.40;MQ0=5;MQRankSum=0.500;QD=1.15;ReadPosRankSum=2.006;VQSLOD=0.9502;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:11.95:0,12,93	0/1:7,0:7:13:13,0,168	0/0:26,0:19:6:0,6,70	0/0:37,0:19:3.48:0,3,47	0/1:25,2:27:25.45:25,0,476	0/0:22,2:24:8.35:0,8,556	0/0:15,0:16:0.90:0,1,169	0/0:25,0:25:15.05:0,15,179	0/1:9,3:12:46.50:47,0,202	0/1:10,6:16:42.25:42,0,233	0/0:19,0:19:27.08:0,27,388	0/1:12,2:14:40.48:40,0,288	0/0:13,0:13:21.05:0,21,299	0/1:12,1:13:12.73:13,0,233	0/0:15,0:15:18.06:0,18,274	0/0:17,0:17:23.94:0,24,193	0/1:27,3:30:50.21:50,0,568	0/0:19,0:24:28.24:0,28,270	0/1:21,0:21:48.43:48,0,331	0/0:30,1:31:12.84:0,13,551	0/1:9,1:10:12.71:13,0,252	0/1:14,2:16:30:30,0,389	0/0:13,0:13:21.06:0,21,301	0/1:15,2:17:28.45:28,0,436	0/1:11,2:13:23.85:24,0,247	0/0:19,0:30:48.05:0,48,531	0/0:17,0:16:36.10:0,36,526	0/0:8,0:7:3:0,3,25
chr10	98226073	.	C	CTCTCTCTCTT	1250.69	PASS	AB=0.867;AC=9;AF=0.161;AN=56;BaseQRankSum=2.909;DP=550;FS=5.014;HRun=0;HaplotypeScore=158.4143;InbreedingCoeff=0.6310;MQ=62.72;MQ0=11;MQRankSum=-3.839;QD=10.34;ReadPosRankSum=-0.706;VQSLOD=2.3923;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:21:15.05:411,15,0	0/0:8,0:8:24:0,24,518	0/0:24,0:15:17.12:0,17,234	0/0:34,0:17:9.43:0,9,172	0/0:30,0:30:79.58:0,80,1390	0/0:26,0:26:69.10:0,69,1413	0/0:16,0:16:45.02:0,45,680	1/1:19,0:19:44.30:357,44,0	0/0:11,0:11:27.05:0,27,581	0/0:21,0:21:50.27:0,50,851	0/0:18,0:18:42.04:0,42,837	0/0:14,0:14:39.06:0,39,799	0/0:11,0:11:27.01:0,27,637	0/0:13,0:13:33.03:0,33,670	0/0:16,0:16:36.03:0,36,672	1/1:15,0:15:24.07:292,24,0	0/0:34,0:32:71.09:0,71,1637	0/1:23,0:22:99:166,0,171	0/0:21,0:18:45.10:0,45,960	0/0:28,0:28:69.11:0,69,1463	0/0:12,0:12:30.06:0,30,698	0/0:18,0:18:42.07:0,42,888	0/0:18,0:18:35.99:0,36,684	0/0:18,0:18:48.10:0,48,1168	0/0:17,0:16:45.04:0,45,777	0/1:31,0:30:32.96:33,0,512	0/0:20,0:19:51.08:0,51,1189	0/1:4,8:11:4.03:149,0,4
chr10	98226075	.	C	CTCTCTT	1310.32	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=3.232;DP=539;FS=0.000;HRun=0;HaplotypeScore=110.3593;InbreedingCoeff=0.6511;MQ=60.13;MQ0=11;MQRankSum=-2.590;QD=13.65;ReadPosRankSum=1.209;VQSLOD=2.8162;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,1:18:12.04:350,12,0	0/0:8,0:8:24:0,24,398	0/0:24,0:15:23.02:0,23,258	0/0:32,0:14:11.12:0,11,178	0/0:30,0:30:80.49:0,80,1126	0/0:26,0:26:69.11:0,69,1125	0/0:16,0:16:48.02:0,48,597	0/0:20,0:20:40.56:0,41,309	0/0:11,0:11:30.05:0,30,470	0/0:21,0:21:50.95:0,51,686	0/0:18,0:18:45.03:0,45,678	0/0:14,0:14:39.06:0,39,616	0/0:10,0:10:27.02:0,27,482	0/0:13,0:13:35.63:0,36,541	0/0:16,0:16:45.01:0,45,617	1/1:3,13:16:24.08:771,24,0	0/0:35,0:33:77.05:0,77,1267	0/1:23,0:22:99:171,0,170	0/0:21,0:18:48.11:0,48,777	0/0:28,0:28:69.10:0,69,1103	0/0:12,0:12:36.05:0,36,584	0/0:18,0:18:45.06:0,45,743	0/0:16,0:16:38.72:0,39,554	0/0:17,0:17:48.10:0,48,881	0/0:17,0:16:45.04:0,45,622	0/1:31,0:30:77.47:77,0,419	0/0:20,0:19:57.06:0,57,952	1/1:8,0:7:6.01:86,6,0
chr10	98226843	.	T	TAC	232.09	PASS	AB=0.947;AC=12;AF=0.231;AN=52;BaseQRankSum=0.505;DP=539;FS=2.677;HRun=0;HaplotypeScore=88.9791;InbreedingCoeff=0.3212;MQ=72.19;MQ0=11;MQRankSum=-2.609;QD=1.62;ReadPosRankSum=-2.773;VQSLOD=0.5646;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,10:35:4.33:86,4,0	0/0:5,0:5:5.98:0,6,57	./.	./.	0/0:11,0:11:8.38:0,8,73	0/0:19,0:19:12.58:0,13,119	0/0:22,0:22:14.79:0,15,144	1/1:17,0:16:8.91:61,9,0	0/0:15,0:17:20.74:0,21,207	0/1:16,1:17:35.37:35,0,43	0/0:7,0:7:9.01:0,9,90	0/0:22,0:25:14.87:0,15,143	0/1:13,1:15:26.47:26,0,117	0/0:11,0:11:5.88:0,6,50	0/1:19,1:22:17.60:18,0,195	0/0:15,0:20:19.89:0,20,98	0/1:10,0:10:26.28:37,0,26	1/1:11,0:23:9.44:73,9,0	0/0:12,0:12:3:0,3,32	0/0:16,0:16:20.83:0,21,199	0/0:32,0:32:17.95:0,18,158	0/0:17,0:17:9.32:0,9,79	0/0:14,0:14:5.84:0,6,64	0/0:32,0:32:20.88:0,21,208	0/0:17,0:18:17.86:0,18,167	0/0:15,0:15:3:0,3,32	0/0:20,0:20:20.99:0,21,205	1/1:1,1:3:3.01:44,3,0
chr10	98227955	.	G	GA	1908.95	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-0.990;DP=675;FS=0.915;HRun=8;HaplotypeScore=68.0284;InbreedingCoeff=0.9948;MQ=80.14;MQ0=0;MQRankSum=-1.292;QD=18.53;ReadPosRankSum=-0.569;VQSLOD=3.3744;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:41:87.94:444,88,0	0/0:8,0:8:15:0,15,137	0/0:26,0:25:38.78:0,39,397	0/0:20,0:21:30.95:0,31,299	0/0:31,0:31:75.02:0,75,682	0/0:24,0:23:53.94:0,54,484	0/0:21,0:21:60.02:0,60,544	1/1:5,23:28:41.74:725,42,0	0/0:30,0:30:81.04:0,81,741	0/0:28,0:28:75.03:0,75,681	0/0:22,0:22:53.99:0,54,484	0/0:20,0:20:60:0,60,539	0/0:20,0:20:53.96:0,54,477	0/0:22,0:22:48.02:0,48,439	0/0:24,0:25:62.04:0,62,547	1/1:3,21:24:54.16:623,54,0	0/0:33,0:33:83.04:0,83,740	0/0:33,0:32:92.97:0,93,831	0/0:29,0:29:78.03:0,78,713	0/0:26,0:26:63.03:0,63,576	0/0:21,0:21:60.01:0,60,544	0/0:19,0:19:51.03:0,51,466	0/0:19,0:19:51.01:0,51,462	0/0:30,0:30:64.17:0,64,716	0/0:22,0:22:63.02:0,63,571	0/0:18,0:19:50.06:0,50,445	0/0:23,0:23:63.03:0,63,576	1/1:0,10:10:24.07:277,24,0
chr10	98228135	.	C	CGCGA	48.24	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=2.579;DP=602;FS=8.161;HRun=0;HaplotypeScore=115.2650;InbreedingCoeff=0.5089;MQ=67.36;MQ0=6;MQRankSum=-2.235;QD=1.61;ReadPosRankSum=-0.113;VQSLOD=1.4257;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,27:38:2.61:0,3,12	0/0:7,0:7:21.07:0,21,396	0/0:23,0:18:43.57:0,44,691	0/0:29,0:21:51.12:0,51,829	0/0:26,0:25:57.18:0,57,1045	0/0:18,0:18:44.48:0,44,729	0/0:27,0:27:72.23:0,72,1310	0/0:28,0:28:2.66:0,3,395	0/0:16,0:16:42.14:0,42,758	0/0:14,0:13:27.09:0,27,503	0/0:19,0:19:42.14:0,42,778	0/0:23,0:23:27.56:0,28,460	0/0:20,0:20:50.72:0,51,840	0/0:19,0:19:47.75:0,48,815	0/0:23,0:23:45.15:0,45,827	1/1:11,0:11:16.53:132,17,0	0/0:26,0:26:51.09:0,51,870	0/0:14,0:13:17.56:0,18,223	0/0:16,0:16:39.81:0,40,680	0/0:20,0:20:36.12:0,36,659	0/0:29,0:29:69.20:0,69,1187	0/0:15,0:15:45.15:0,45,836	0/1:19,0:19:16.82:17,0,649	0/0:33,0:32:61.73:0,62,1017	0/0:20,0:20:45.56:0,46,665	0/0:28,0:28:66.05:0,66,1045	0/0:27,0:27:72.03:0,72,1275	0/0:14,0:14:32.91:0,33,263
chr10	98228498	.	TA	T	2149.65	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=14.013;DP=566;FS=2.665;HRun=8;HaplotypeScore=72.0410;InbreedingCoeff=0.9925;MQ=86.41;MQ0=0;MQRankSum=-10.614;QD=20.87;ReadPosRankSum=-2.797;VQSLOD=2.7465;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:7,38:46:99:1010,107,0	0/0:7,0:7:18.04:0,18,198	0/0:21,0:21:51:0,51,566	0/0:21,0:21:41.91:0,42,465	0/0:19,0:19:54.15:0,54,632	0/0:18,0:18:48.14:0,48,567	0/0:21,0:21:51.14:0,51,603	1/1:9,19:28:63.08:604,63,0	0/0:24,0:24:63.17:0,63,739	0/0:14,0:14:39.12:0,39,469	0/0:11,0:11:33.10:0,33,399	0/0:19,0:19:36.11:0,36,435	0/0:21,0:21:57.17:0,57,689	0/0:17,0:17:45.14:0,45,543	0/0:18,0:18:48.15:0,48,580	1/1:4,16:20:51.08:492,51,0	0/0:50,0:50:99:0,129,1540	0/0:24,0:24:60.14:0,60,708	0/0:11,0:11:21.06:0,21,254	0/0:21,0:21:60.17:0,60,706	0/0:13,0:13:39.12:0,39,471	0/0:6,0:6:18.05:0,18,208	0/0:11,0:11:24.07:0,24,290	0/0:25,0:25:72.21:0,72,859	0/0:20,0:20:57.16:0,57,669	0/0:21,0:21:60.18:0,60,716	0/0:30,0:30:78.24:0,78,942	1/1:2,7:9:21.03:203,21,0
chr10	98228513	.	AT	A	3595.01	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=14.096;DP=543;FS=2.389;HRun=2;HaplotypeScore=65.9910;InbreedingCoeff=0.9883;MQ=77.87;MQ0=0;MQRankSum=-9.208;QD=32.68;ReadPosRankSum=-3.378;VQSLOD=2.4425;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:5,44:49:99:1536,132,0	0/0:4,0:4:12.04:0,12,172	0/0:15,0:15:39.08:0,39,512	0/0:12,0:12:20.62:0,21,236	0/0:17,0:17:51.17:0,51,760	0/0:17,0:17:51.17:0,51,762	0/0:22,0:22:66.20:0,66,947	1/1:5,28:33:87.21:1080,87,0	0/0:20,0:20:60.18:0,60,859	0/0:17,0:17:51.17:0,51,756	0/0:12,0:12:36.03:0,36,492	0/0:11,0:11:33.10:0,33,474	0/0:23,0:23:69.20:0,69,986	0/0:17,0:17:48.16:0,48,717	0/0:14,0:14:42.14:0,42,626	1/1:2,17:19:57.10:687,57,0	0/0:45,0:45:99:0,135,2022	0/0:24,0:24:63.17:0,63,916	0/0:8,0:8:24.07:0,24,338	0/0:20,0:19:54.18:0,54,809	0/0:14,0:14:39.13:0,39,584	0/0:8,0:8:24.08:0,24,359	0/0:12,0:12:36.12:0,36,535	0/0:26,0:26:75.23:0,75,1101	0/0:18,0:18:54.16:0,54,769	0/0:24,0:24:72.24:0,72,1058	0/0:33,0:33:99:0,99,1394	1/1:1,8:9:24.04:293,24,0
chr10	98228668	.	G	GCACA	756.59	PASS	AB=1.000;AC=5;AF=0.093;AN=54;BaseQRankSum=-2.067;DP=554;FS=2.103;HRun=0;HaplotypeScore=102.4670;InbreedingCoeff=0.5152;MQ=59.83;MQ0=11;MQRankSum=-0.871;QD=10.22;ReadPosRankSum=-0.743;VQSLOD=2.7029;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:18.02:0,18,205	0/1:11,0:11:2.32:2,0,216	1/1:31,0:17:1.72:4,2,0	./.	0/0:28,0:32:45.55:0,46,598	0/0:19,0:19:30.98:0,31,451	0/0:17,0:17:1.49:0,1,218	0/0:20,0:21:5.03:0,5,33	0/0:12,0:14:18.05:0,18,243	0/0:19,0:19:12.04:0,12,187	0/0:15,0:16:21.06:0,21,309	0/0:9,0:9:12.04:0,12,187	0/0:11,0:11:6.02:0,6,94	0/0:8,0:10:24.07:0,24,334	0/0:14,0:14:18.06:0,18,280	0/0:11,0:18:14.89:0,15,137	0/0:33,0:33:22.01:0,22,541	1/1:15,14:32:41.70:849,42,0	0/0:10,0:10:9.03:0,9,140	0/0:25,0:28:45.11:0,45,618	0/0:25,0:26:24.06:0,24,335	0/0:12,0:14:24.03:0,24,290	0/0:13,0:14:21.04:0,21,285	0/0:30,0:30:39.08:0,39,555	0/0:13,0:13:21.07:0,21,324	0/0:9,0:15:14.66:0,15,139	0/0:24,0:25:60.20:0,60,915	0/0:3,0:7:9.01:0,9,84
chr10	98229234	.	G	GA	1082.21	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.343;DP=645;FS=1.365;HRun=8;HaplotypeScore=64.4095;InbreedingCoeff=0.9804;MQ=78.10;MQ0=1;MQRankSum=-1.176;QD=29.25;ReadPosRankSum=2.788;VQSLOD=3.8933;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:37:99:1177,102,0	0/0:9,0:9:21.01:0,21,192	0/0:21,0:18:16.88:0,17,212	0/0:18,0:16:26.49:0,26,226	0/0:25,0:25:72.02:0,72,654	0/0:21,0:21:63:0,63,569	0/0:25,0:25:72.04:0,72,659	0/0:30,0:30:75.01:0,75,677	0/0:20,0:20:60.02:0,60,545	0/0:20,0:19:54.02:0,54,491	0/0:15,0:15:36.02:0,36,330	0/0:30,0:30:87.05:0,87,795	0/0:24,0:24:56.99:0,57,514	0/0:25,0:25:69.02:0,69,631	0/0:32,0:32:84.04:0,84,769	0/0:27,0:27:75.03:0,75,686	0/0:18,0:18:48.02:0,48,439	0/0:27,0:27:78.04:0,78,713	0/0:8,0:8:24.01:0,24,220	0/0:24,0:24:69.03:0,69,631	0/0:21,0:21:51.02:0,51,467	0/0:21,0:20:57.03:0,57,521	0/0:20,0:20:57.03:0,57,522	0/0:19,0:19:48.02:0,48,439	0/0:25,0:25:56.89:0,57,521	0/0:42,0:42:99:0,114,1035	0/0:31,0:31:81.01:0,81,736	0/0:10,0:10:24:0,24,220
chr10	98229902	.	TA	T	1934.03	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.003;DP=816;FS=8.811;HRun=4;HaplotypeScore=74.9553;InbreedingCoeff=0.9985;MQ=58.98;MQ0=0;MQRankSum=-0.022;QD=29.75;ReadPosRankSum=-1.935;VQSLOD=2.5910;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,126,1726	0/0:13,0:13:39.13:0,39,545	0/0:30,0:21:42.11:0,42,532	0/0:21,0:21:54.12:0,54,690	0/0:24,0:24:63.21:0,63,881	0/0:31,0:31:72.22:0,72,978	0/0:31,0:31:84.26:0,84,1144	1/1:2,24:26:72.21:852,72,0	0/0:28,0:26:57.19:0,57,798	0/0:32,0:31:90.29:0,90,1240	0/0:14,0:14:39.13:0,39,546	0/0:28,0:27:69.22:0,69,948	0/0:26,0:23:66.06:0,66,901	0/0:48,0:44:99:0,114,1561	0/0:29,0:28:75.24:0,75,1033	1/1:3,29:32:81.25:972,81,0	0/0:29,0:27:81.26:0,81,1115	0/0:44,0:45:99:0,126,1758	0/0:19,0:19:54.18:0,54,748	0/0:38,0:38:99:0,114,1561	0/0:18,0:18:54.18:0,54,756	0/0:32,0:32:96.10:0,96,1297	0/0:27,0:27:78.25:0,78,1074	0/0:35,0:34:99:0,99,1368	0/0:34,0:33:96.28:0,96,1322	0/0:38,0:38:99:0,114,1561	0/0:32,0:30:84.09:0,84,1088	1/1:0,7:7:21.06:252,21,0
chr10	98230780	.	ATGTGGCT	A	1709.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.514;DP=811;FS=0.777;HRun=0;HaplotypeScore=174.0703;InbreedingCoeff=0.9990;MQ=63.58;MQ0=0;MQRankSum=-8.118;QD=46.19;ReadPosRankSum=-0.332;VQSLOD=3.4822;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,35:35:69.24:1804,69,0	0/0:9,0:9:27.09:0,27,1106	0/0:19,0:19:53.67:0,54,1943	0/0:31,0:31:87.21:0,87,2829	0/0:21,0:20:60.19:0,60,2354	0/0:30,0:30:84.29:0,84,3352	0/0:27,0:27:81.28:0,81,2825	0/0:29,0:28:87.25:0,87,3166	0/0:35,0:35:99:0,99,3900	0/0:43,0:43:99:0,129,5059	0/0:15,0:15:45.15:0,45,1682	0/0:33,0:32:87.30:0,87,3104	0/0:31,0:31:87.30:0,87,3318	0/0:35,0:35:96.32:0,96,3695	0/0:29,0:29:81.26:0,81,3143	0/0:37,0:37:93.31:0,93,3364	0/0:23,0:23:66.23:0,66,2458	0/0:23,0:23:66.23:0,66,2381	0/0:32,0:32:84.25:0,84,2769	0/0:36,0:36:99:0,105,3947	0/0:35,0:35:99:0,105,3805	0/0:31,0:31:90.29:0,90,3483	0/0:25,0:25:75.26:0,75,2947	0/0:24,0:24:72.25:0,72,2888	0/0:35,0:35:99:0,102,4003	0/0:39,0:39:99:0,114,4472	0/0:31,0:31:87.30:0,87,3446	0/0:16,0:16:45.15:0,45,1596
chr10	98232683	.	A	AT	4963.67	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-11.819;DP=684;FS=1.691;HRun=2;HaplotypeScore=64.6065;InbreedingCoeff=0.9927;MQ=78.23;MQ0=0;MQRankSum=-2.485;QD=41.02;ReadPosRankSum=-0.887;VQSLOD=4.6648;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:64.77:989,65,0	0/0:12,0:12:36.11:0,36,482	0/0:20,0:20:54.07:0,54,669	0/0:19,0:19:51.60:0,52,671	0/0:32,0:32:96.30:0,96,1309	0/0:27,0:27:78.24:0,78,1058	0/0:18,0:18:54.18:0,54,755	1/1:1,42:42:99:1860,126,0	0/0:16,0:16:48.12:0,48,620	0/0:29,0:29:81.27:0,81,1119	0/0:24,0:24:72.23:0,72,989	0/0:29,0:29:84.27:0,84,1157	0/0:28,0:28:84.28:0,84,1170	0/0:26,0:26:78.26:0,78,1091	0/0:24,0:24:72.23:0,72,986	1/1:1,28:29:30.29:1036,30,0	0/0:19,0:19:57.15:0,57,745	1/1:0,20:20:57.19:891,57,0	0/0:18,0:18:54.18:0,54,754	0/0:33,0:33:99:0,99,1308	0/0:24,0:24:72.23:0,72,988	0/0:22,0:22:66.20:0,66,878	0/0:27,0:27:81.26:0,81,1113	0/0:17,0:17:48.14:0,48,650	0/0:26,0:26:72.24:0,72,1007	0/0:38,0:38:99:0,114,1576	0/0:35,0:35:99:0,105,1451	1/1:0,4:4:12.04:188,12,0
chr10	98235382	.	G	GTGCCACC	5275.92	PASS	AB=0.618;AC=5;AF=0.089;AN=56;BaseQRankSum=-4.888;DP=581;FS=0.553;HRun=0;HaplotypeScore=127.6672;InbreedingCoeff=0.7690;MQ=83.42;MQ0=0;MQRankSum=-11.360;QD=77.59;ReadPosRankSum=-0.855;VQSLOD=5.0917;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,12:18:32.70:1273,33,0	0/0:5,0:5:15.05:0,15,396	0/0:23,0:23:66.19:0,66,1570	0/0:20,0:20:34.04:0,34,1127	0/0:26,0:26:75.26:0,75,1951	0/0:9,0:9:27.09:0,27,712	0/0:19,0:19:54.19:0,54,1424	0/0:36,0:36:99:0,99,2300	0/0:14,0:14:39.13:0,39,1028	0/0:22,0:22:63.21:0,63,1529	0/0:23,0:23:60.21:0,60,1549	0/0:25,0:25:72.25:0,72,1870	0/0:16,0:16:48.16:0,48,1255	0/0:26,0:26:75.26:0,75,1978	0/0:28,0:28:84.29:0,84,2186	1/1:6,19:29:69.24:2643,69,0	0/0:22,0:22:63.22:0,63,1652	0/1:8,10:21:34.06:1361,0,34	0/0:20,0:20:60.21:0,60,1576	0/0:11,0:11:33.10:0,33,816	0/0:44,0:44:99:0,129,3318	0/0:17,0:17:48.16:0,48,1222	0/0:14,0:14:42.14:0,42,1107	0/0:25,0:25:72.25:0,72,1842	0/0:18,0:18:54.16:0,54,1343	0/0:19,0:19:54.19:0,54,1403	0/0:23,0:23:69.22:0,69,1706	0/0:8,0:8:15.05:0,15,396
chr10	98235955	.	TA	T	1545.71	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.120;DP=750;FS=5.838;HRun=1;HaplotypeScore=72.2439;InbreedingCoeff=0.9989;MQ=74.26;MQ0=0;MQRankSum=-0.422;QD=36.80;ReadPosRankSum=0.759;VQSLOD=4.0395;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1671	0/0:8,0:8:24.08:0,24,380	0/0:24,0:24:72.17:0,72,1038	0/0:23,0:23:67.43:0,67,1002	0/0:24,0:24:69.21:0,69,1054	0/0:26,0:26:78.24:0,78,1197	0/0:27,0:27:81.26:0,81,1271	1/1:0,24:24:69.19:914,69,0	0/0:29,0:29:87.30:0,87,1385	0/0:35,0:35:99:0,105,1637	0/0:18,0:18:47.80:0,48,680	0/0:33,0:33:99:0,99,1580	0/0:21,0:21:63.21:0,63,1006	0/0:22,0:22:66.23:0,66,1054	0/0:30,0:30:90.31:0,90,1435	0/0:23,0:23:69.22:0,69,1079	0/0:46,0:46:99:0,138,2177	0/0:37,0:37:99:0,108,1725	0/0:21,0:21:63.21:0,63,985	0/0:17,0:17:51.17:0,51,815	0/0:22,0:22:63.18:0,63,956	0/0:20,0:20:54.17:0,54,835	0/0:28,0:28:84.23:0,84,1249	0/0:48,0:48:99:0,144,2242	0/0:31,0:31:93.30:0,93,1442	0/0:28,0:28:84.27:0,84,1299	0/0:32,0:31:96.32:0,96,1505	1/1:0,18:18:54.18:754,54,0
chr10	98236528	.	C	CA	1516.38	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.396;DP=721;FS=6.029;HRun=3;HaplotypeScore=66.6372;InbreedingCoeff=0.9994;MQ=84.93;MQ0=0;MQRankSum=-4.860;QD=32.26;ReadPosRankSum=-1.186;VQSLOD=3.2836;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:27:69.23:966,69,0	0/0:9,0:9:27.08:0,27,323	0/0:28,0:28:78.06:0,78,882	0/0:18,0:18:41.04:0,41,452	0/0:30,0:30:84.24:0,84,994	0/0:30,0:30:87.27:0,87,1043	0/0:17,0:17:48.15:0,48,576	0/0:34,0:34:96.27:0,96,1133	0/0:22,0:22:66.20:0,66,792	0/0:34,0:34:99:0,102,1215	0/0:26,0:26:72.20:0,72,851	0/0:31,0:31:87.27:0,87,1042	0/0:31,0:31:87.27:0,87,1044	0/0:23,0:23:66.20:0,66,792	0/0:34,0:34:99:0,99,1188	0/0:31,0:31:93.26:0,93,1103	0/0:18,0:18:48.15:0,48,576	1/1:1,19:20:48.16:672,48,0	0/0:22,0:22:63.19:0,63,748	0/0:37,0:37:99:0,108,1284	0/0:33,0:33:90.27:0,90,1079	0/0:29,0:29:87.24:0,87,1019	0/0:32,0:32:96.25:0,96,1125	0/0:26,0:26:75.22:0,75,888	0/0:19,0:19:54.17:0,54,648	0/0:25,0:25:72.22:0,72,864	0/0:23,0:23:69.20:0,69,814	0/0:12,0:12:36.11:0,36,432
chr10	98237225	.	CT	C	479.09	PASS	AB=0.875;AC=3;AF=0.054;AN=56;BaseQRankSum=5.012;DP=532;FS=15.128;HRun=10;HaplotypeScore=57.7496;InbreedingCoeff=0.6485;MQ=72.55;MQ0=0;MQRankSum=0.791;QD=14.97;ReadPosRankSum=0.438;VQSLOD=2.2168;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,2:35:26.09:0,26,733	0/1:6,1:7:5:5,0,178	0/0:16,0:15:23.51:0,24,215	0/0:12,0:12:20.48:0,20,207	0/0:20,1:22:39.96:0,40,651	0/0:21,1:22:30.59:0,31,547	0/0:16,0:17:41.95:0,42,445	0/0:24,1:25:31.07:0,31,549	0/0:25,0:25:69.19:0,69,763	0/0:22,2:24:11.06:0,11,578	0/0:21,0:21:60.12:0,60,649	0/0:9,0:9:27.07:0,27,295	0/0:15,1:17:21.91:0,22,453	0/0:19,0:19:54.13:0,54,589	0/0:22,0:22:57.15:0,57,631	1/1:1,24:25:65.99:573,66,0	0/0:24,0:24:52.24:0,52,584	0/0:20,1:22:30.93:0,31,552	0/0:13,1:14:16.04:0,16,389	0/0:20,0:20:48.13:0,48,531	0/0:14,0:14:30.07:0,30,325	0/0:15,0:16:41.94:0,42,438	0/0:12,0:13:32.92:0,33,345	0/0:17,0:17:30.04:0,30,318	0/0:15,0:15:39.10:0,39,424	0/0:29,1:30:52.13:0,52,780	0/0:26,0:25:75.20:0,75,829	0/0:3,0:3:9.02:0,9,100
chr10	98237458	.	T	TA	803.09	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.637;DP=238;FS=3.003;HRun=0;HaplotypeScore=29.9210;InbreedingCoeff=0.6205;MQ=65.65;MQ0=1;MQRankSum=0.645;QD=29.74;ReadPosRankSum=2.259;VQSLOD=3.7673;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:9:21.07:314,21,0	0/0:1,0:1:3:0,3,27	0/0:9,0:7:18.31:0,18,200	0/0:10,0:9:14.55:0,15,155	0/0:8,0:8:24.08:0,24,332	0/0:10,0:10:30.10:0,30,419	0/0:3,0:3:9.03:0,9,125	0/0:38,0:38:99:0,108,1292	0/0:5,0:5:15.04:0,15,192	0/0:10,0:10:30.09:0,30,405	0/0:6,0:6:18.03:0,18,205	0/0:6,0:6:18.06:0,18,252	0/0:3,0:3:9.03:0,9,126	0/0:2,0:2:6.01:0,6,69	0/0:6,0:6:18.05:0,18,237	0/0:5,0:5:8.96:0,9,80	0/0:26,0:26:72.19:0,72,938	1/1:3,15:18:25.21:608,25,0	0/0:14,0:14:42.14:0,42,587	0/0:3,0:3:9.02:0,9,110	0/0:2,0:2:6:0,6,66	0/0:1,0:1:3.01:0,3,42	0/0:6,0:6:18.04:0,18,221	0/0:1,0:1:3.01:0,3,42	0/0:7,0:7:21.05:0,21,274	0/0:6,0:6:18.05:0,18,236	0/0:8,0:8:21.05:0,21,261	0/0:15,0:15:24.07:0,24,281
chr10	98237473	.	TTTA	T	44.63	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.549;DP=255;FS=0.000;HRun=0;HaplotypeScore=43.2973;InbreedingCoeff=0.4461;MQ=65.13;MQ0=0;MQRankSum=-2.889;QD=8.93;ReadPosRankSum=0.496;VQSLOD=2.3205;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:33.08:0,33,594	0/0:2,0:2:6.02:0,6,112	0/0:5,0:5:3.01:0,3,36	0/0:10,0:10:17.52:0,18,208	0/0:12,0:12:36.10:0,36,648	0/0:12,0:12:36.10:0,36,678	0/0:4,0:4:9.02:0,9,141	0/0:39,0:39:99:0,105,1924	0/0:7,0:7:21.04:0,21,369	0/0:11,0:11:30.08:0,30,580	0/0:5,0:5:15.05:0,15,320	0/0:8,0:8:24.07:0,24,446	0/0:6,0:6:18.04:0,18,300	0/0:3,0:3:9.03:0,9,172	0/0:7,0:7:21.06:0,21,382	1/1:0,5:5:8.86:127,9,0	0/0:21,0:21:57.11:0,57,1132	0/0:17,0:17:48.07:0,48,842	0/0:16,0:16:39.12:0,39,728	0/0:1,0:1:3.01:0,3,64	0/0:1,0:1:3.01:0,3,64	0/0:3,0:3:8.97:0,9,109	0/0:8,0:8:21.07:0,21,422	0/0:3,0:3:9.03:0,9,165	0/0:7,0:7:21.07:0,21,425	0/0:5,0:5:15.05:0,15,306	0/0:12,0:12:36.12:0,36,729	0/0:13,0:13:21.07:0,21,351
chr10	98237992	.	G	GC	592.60	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.681;DP=618;FS=0.821;HRun=7;HaplotypeScore=63.7115;InbreedingCoeff=0.9819;MQ=83.24;MQ0=0;MQRankSum=-2.445;QD=24.69;ReadPosRankSum=1.984;VQSLOD=4.1856;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:81.10:0,81,774	0/0:10,0:10:30.04:0,30,285	0/0:23,0:22:51.05:0,51,484	0/0:20,0:18:15.10:0,15,243	0/0:8,0:8:24.04:0,24,232	0/0:25,0:25:67.89:0,68,630	0/0:30,0:30:69.10:0,69,666	0/0:21,0:21:41.98:0,42,383	0/0:20,0:20:60.08:0,60,571	0/0:23,0:23:63.10:0,63,608	0/0:15,0:15:45.07:0,45,434	0/0:23,0:23:66.11:0,66,637	0/0:27,0:27:78.11:0,78,747	0/0:21,0:21:63.10:0,63,607	0/0:17,0:17:42.06:0,42,405	1/1:4,20:24:57.17:687,57,0	0/0:25,0:25:66.10:0,66,637	0/0:17,0:17:48.06:0,48,457	0/0:20,0:20:51.01:0,51,474	0/0:20,0:20:60.08:0,60,573	0/0:31,0:31:84.12:0,84,806	0/0:21,0:21:57.06:0,57,541	0/0:19,0:19:51.08:0,51,492	0/0:27,0:27:66.05:0,66,623	0/0:29,0:29:75.12:0,75,724	0/0:29,0:29:75.11:0,75,719	0/0:26,0:26:78.11:0,78,746	0/0:11,0:11:33:0,33,300
chr10	98239227	.	T	TA	855.18	PASS	AB=0.846;AC=9;AF=0.161;AN=56;BaseQRankSum=4.891;DP=593;FS=11.638;HRun=13;HaplotypeScore=74.1596;InbreedingCoeff=0.6062;MQ=62.46;MQ0=3;MQRankSum=-0.448;QD=6.63;ReadPosRankSum=-3.547;VQSLOD=0.4681;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:0.90:107,0,1	0/0:8,0:8:20.79:0,21,144	0/1:13,1:8:12.01:12,0,15	0/0:7,0:6:5.58:0,6,37	0/0:24,0:29:42.41:0,42,366	0/0:23,0:25:63.57:0,64,423	0/0:22,0:22:50.95:0,51,351	1/1:31,0:28:53.76:224,54,0	0/0:17,0:18:46.62:0,47,311	0/0:32,0:33:72.38:0,72,497	0/0:16,4:20:13.69:0,14,239	0/0:15,0:15:41.64:0,42,287	0/0:18,0:18:49.65:0,50,335	0/0:10,0:11:20.75:0,21,144	0/0:28,1:31:50.57:0,51,476	1/1:2,15:18:14.62:308,15,0	0/0:32,0:34:90.30:0,90,606	0/1:10,11:21:31.74:281,0,32	0/0:21,0:19:1.24:0,1,124	0/0:24,0:26:53.83:0,54,342	0/0:8,0:9:19.80:0,20,125	0/0:16,0:16:44.45:0,44,301	0/0:23,1:24:24.68:0,25,304	0/0:13,1:14:13.83:0,14,239	0/0:24,0:24:46.07:0,46,308	0/0:24,0:26:60.75:0,61,398	0/0:31,0:31:74.32:0,74,514	1/1:15,0:15:18.81:78,19,0
chr10	98239235	.	A	AAAAAAC	1144.38	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=6.535;DP=614;FS=11.039;HRun=0;HaplotypeScore=133.8833;InbreedingCoeff=0.8174;MQ=64.92;MQ0=1;MQRankSum=-3.648;QD=11.92;ReadPosRankSum=-2.898;VQSLOD=1.5381;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:35:32.57:1067,33,0	0/0:9,0:9:21.07:0,21,421	0/1:16,0:7:51.66:52,0,96	0/0:11,0:9:12.03:0,12,147	0/0:29,0:29:74.83:0,75,1205	0/0:26,0:26:75.21:0,75,1352	0/0:23,0:23:52.34:0,52,933	1/1:3,0:29:39.60:137,40,0	0/0:22,0:22:60.15:0,60,993	0/0:33,0:33:84.26:0,84,1503	0/0:22,0:22:51.12:0,51,848	0/0:16,0:16:48.15:0,48,872	0/0:19,0:18:51.17:0,51,1003	0/0:12,0:12:30.03:0,30,462	0/0:30,0:30:81.26:0,81,1519	0/0:21,0:21:47.90:0,48,471	0/0:34,0:34:93.30:0,93,1783	0/0:19,0:19:46.59:0,47,453	0/0:20,0:20:34.59:0,35,471	0/0:28,0:27:60.18:0,60,1072	0/0:8,0:8:24.06:0,24,374	0/0:19,0:19:54.06:0,54,893	0/0:27,0:27:66.01:0,66,1037	0/0:14,0:14:42.14:0,42,805	0/0:20,0:20:42.13:0,42,842	0/0:27,0:27:69.20:0,69,1207	0/0:29,0:29:81.26:0,81,1554	1/1:5,0:13:12.90:36,13,0
chr10	98240229	.	TTTG	T	1241.48	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.880;DP=699;FS=2.457;HRun=0;HaplotypeScore=110.5321;InbreedingCoeff=0.9947;MQ=94.70;MQ0=0;MQRankSum=-4.693;QD=24.83;ReadPosRankSum=1.675;VQSLOD=3.8844;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,41:50:84.29:1336,84,0	0/0:8,0:8:21.07:0,21,460	0/0:36,0:36:99:0,102,2121	0/0:29,0:29:81.21:0,81,1590	0/0:21,0:21:60.18:0,60,1233	0/0:23,0:23:63.22:0,63,1371	0/0:17,0:17:51.16:0,51,1067	0/0:21,0:21:63.19:0,63,1253	0/0:26,0:26:72.25:0,72,1544	0/0:26,0:26:75.26:0,75,1615	0/0:13,0:13:33.11:0,33,723	0/0:30,0:30:84.29:0,84,1840	0/0:15,0:15:45.15:0,45,986	0/0:28,0:28:84.27:0,84,1778	0/0:31,0:31:93.32:0,93,2030	0/0:39,0:39:99:0,102,2090	0/0:34,0:34:99:0,99,2169	0/0:17,0:17:48.16:0,48,1043	0/0:18,0:18:48.16:0,48,1039	0/0:32,0:32:87.30:0,87,1897	0/0:22,0:22:63.19:0,63,1320	0/0:29,0:29:84.29:0,84,1841	0/0:18,0:18:54.19:0,54,1183	0/0:21,0:21:57.18:0,57,1207	0/0:30,0:30:87.30:0,87,1885	0/0:27,0:27:78.27:0,78,1698	0/0:29,0:29:84.29:0,84,1821	0/0:9,0:9:27.01:0,27,524
chr10	98240424	.	TATAG	T	2601.49	PASS	AB=1.000;AC=28;AF=0.560;AN=50;BaseQRankSum=6.293;DP=743;FS=3.611;HRun=0;HaplotypeScore=132.3850;InbreedingCoeff=0.6266;MQ=73.18;MQ0=11;MQRankSum=-0.291;QD=6.54;ReadPosRankSum=-0.600;VQSLOD=2.7538;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:2.37:8,2,0	1/1:8,5:13:9.03:134,9,0	./.	./.	0/0:38,0:38:36.11:0,36,712	0/0:15,0:25:12.03:0,12,182	0/1:24,0:23:0:0,0,0	./.	0/0:26,0:26:33.10:0,33,667	0/0:36,0:36:26.90:0,27,455	0/0:20,0:20:21.05:0,21,376	1/1:17,16:33:18.06:269,18,0	1/1:16,14:30:36.12:537,36,0	1/1:19,6:25:12.04:179,12,0	0/0:35,0:35:33.10:0,33,637	0/1:30,0:29:14.15:14,0,25	1/1:15,1:16:6.02:87,6,0	0/1:19,0:20:9.69:78,0,10	1/1:17,4:20:12.03:158,12,0	0/1:35,0:35:31.80:32,0,572	0/0:21,0:24:21.06:0,21,329	1/1:19,10:29:11.87:179,12,0	1/1:20,6:26:6.02:90,6,0	1/1:20,4:24:30.10:441,30,0	0/0:29,0:29:48.15:0,48,1008	1/1:17,14:31:39.10:537,39,0	0/0:29,0:29:42.13:0,42,869	1/1:11,0:11:3.01:44,3,0
chr10	98240484	.	GAT	G	171.34	PASS	AB=0.952;AC=5;AF=0.089;AN=56;BaseQRankSum=14.159;DP=791;FS=0.528;HRun=0;HaplotypeScore=138.2968;InbreedingCoeff=0.3240;MQ=76.69;MQ0=17;MQRankSum=-0.366;QD=1.75;ReadPosRankSum=2.181;VQSLOD=2.6233;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:13:9.49:0,9,98	0/0:13,0:13:20.17:0,20,300	0/0:31,0:23:13.83:0,14,484	0/0:46,0:31:20:0,20,550	0/0:23,0:23:69.18:0,69,1124	0/0:28,0:28:63.19:0,63,891	0/0:20,0:18:36.02:0,36,514	0/1:39,0:34:67.76:68,0,424	0/0:34,0:34:99:0,99,1607	0/0:32,0:30:90.29:0,90,1381	0/0:24,0:24:66.22:0,66,1077	0/0:34,0:34:39.59:0,40,632	0/0:29,0:29:34.30:0,34,619	0/0:21,0:21:41.56:0,42,637	0/0:39,0:38:99:0,108,1706	0/1:26,0:24:42.88:43,0,78	0/0:24,0:24:48.65:0,49,663	0/1:15,3:18:79.37:79,0,84	0/0:27,0:24:60.70:0,61,798	0/0:34,0:34:93.15:0,93,1444	0/0:21,0:21:63.19:0,63,900	0/0:21,0:20:22.86:0,23,360	0/0:27,0:27:55.33:0,55,769	0/0:30,0:29:35.57:0,36,550	0/0:36,0:36:99:0,108,1747	0/0:37,0:37:66.41:0,66,982	0/0:33,0:33:99:0,99,1616	1/1:14,1:15:26:105,26,0
chr10	98240490	.	TAG	T	265.73	PASS	AB=0.825;AC=7;AF=0.125;AN=56;BaseQRankSum=9.212;DP=830;FS=3.079;HRun=0;HaplotypeScore=151.5300;InbreedingCoeff=0.5984;MQ=82.90;MQ0=13;MQRankSum=-1.513;QD=2.18;ReadPosRankSum=-0.163;VQSLOD=2.6672;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:6,18:11:0.33:78,0,0	0/0:14,0:14:25.50:0,25,368	0/0:40,0:31:42.88:0,43,743	0/0:65,0:48:88.40:0,88,1107	0/0:23,0:23:66.20:0,66,1062	0/0:30,0:30:66.20:0,66,949	0/0:19,0:18:42.13:0,42,617	0/1:38,0:36:96.76:97,0,503	0/0:32,0:32:93.30:0,93,1484	0/0:33,0:32:62.43:0,62,1307	0/0:23,0:23:63.21:0,63,993	0/0:31,0:31:47.98:0,48,691	0/0:31,0:31:56.81:0,57,766	0/0:25,0:25:59.06:0,59,850	0/0:41,0:40:99:0,111,1704	1/1:26,0:24:18.50:63,19,0	0/0:26,0:26:54.71:0,55,786	0/1:17,2:19:40.46:102,0,40	0/0:27,0:27:69.73:0,70,1006	0/0:34,0:34:90.72:0,91,1370	0/0:22,0:22:59.87:0,60,831	0/0:23,0:22:37.24:0,37,549	0/0:27,0:27:64.14:0,64,939	0/0:27,0:27:46.47:0,46,611	0/0:39,0:39:99:0,114,1851	0/0:40,0:40:88.83:0,89,1218	0/0:34,0:34:96.31:0,96,1555	1/1:14,1:15:12.82:65,13,0
chr10	98240492	.	G	GAT	244.31	PASS	AB=0.952;AC=8;AF=0.143;AN=56;BaseQRankSum=9.866;DP=835;FS=1.863;HRun=0;HaplotypeScore=153.4862;InbreedingCoeff=0.5104;MQ=83.89;MQ0=11;MQRankSum=-2.400;QD=1.68;ReadPosRankSum=-0.652;VQSLOD=2.7721;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,4:11:0.33:78,0,0	0/0:14,0:14:33.10:0,33,452	0/0:44,0:34:53.92:0,54,828	0/0:68,0:50:87.76:0,88,1093	0/0:24,0:24:66.20:0,66,980	0/0:29,0:29:25.05:0,25,802	0/0:19,0:18:42.13:0,42,617	0/1:42,0:41:99:121,0,469	0/0:33,0:33:96.30:0,96,1418	0/0:32,0:31:65.43:0,65,1288	0/0:22,0:22:63.20:0,63,938	0/0:31,0:31:63.18:0,63,858	0/0:31,0:31:87.21:0,87,1100	0/0:25,0:25:69.20:0,69,961	0/0:39,1:39:99:0,111,1640	1/1:23,0:22:16.38:36,16,0	0/0:26,0:27:61.60:0,62,897	0/1:19,1:20:29.15:107,0,29	0/0:27,0:27:74.83:0,75,1076	0/0:33,0:33:90.72:0,91,1287	0/1:21,0:21:7.30:7,0,623	0/0:24,0:23:46.92:0,47,661	0/0:27,0:27:69.21:0,69,995	0/0:27,0:27:64.08:0,64,819	0/0:38,0:38:99:0,114,1733	0/0:41,0:41:99:0,115,1510	0/0:34,0:34:96.31:0,96,1435	1/1:15,0:15:12.20:37,12,0
chr10	98240576	.	TTGAGTATACAGTCC	T	3672.85	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.710;DP=739;FS=2.425;HRun=0;HaplotypeScore=280.1314;InbreedingCoeff=0.9976;MQ=79.30;MQ0=0;MQRankSum=-8.394;QD=83.47;ReadPosRankSum=1.145;VQSLOD=3.1565;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,7:11:21.07:860,21,0	0/0:10,0:10:30.10:0,30,2049	0/0:23,0:23:66.23:0,66,3426	0/0:17,0:17:44.15:0,44,2286	0/0:27,0:27:78.27:0,78,5279	0/0:30,0:30:90.27:0,90,5535	0/0:19,0:19:51.16:0,51,3358	0/0:33,0:33:96.33:0,96,5948	0/0:34,0:34:99:0,99,6456	0/0:34,0:34:96.32:0,96,5910	0/0:18,0:18:51.11:0,51,3036	0/0:26,0:26:75.26:0,75,4749	0/0:25,0:25:75.26:0,75,4673	0/0:29,0:29:78.27:0,78,5251	0/0:27,0:27:75.26:0,75,4669	1/1:5,27:31:66.23:2813,66,0	0/0:31,0:31:90.31:0,90,5760	0/0:21,0:21:60.21:0,60,4068	0/0:29,0:29:81.27:0,81,4672	0/0:29,0:29:84.29:0,84,5372	0/0:53,0:53:99:0,160,10498	0/0:33,0:33:96.33:0,96,6297	0/0:24,0:24:69.22:0,69,4175	0/0:26,0:26:74.87:0,75,5015	0/0:23,0:23:69.24:0,69,3729	0/0:30,0:30:81.26:0,81,4985	0/0:26,0:24:72.25:0,72,4555	0/0:18,0:18:54.19:0,54,3050
chr10	98240683	.	T	TCC	2508	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=3.711;DP=680;FS=1.507;HRun=8;HaplotypeScore=90.9711;InbreedingCoeff=0.9914;MQ=72.93;MQ0=6;MQRankSum=-3.507;QD=22.00;ReadPosRankSum=-0.505;VQSLOD=2.6677;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,18:30:66.07:964,66,0	0/0:12,0:12:27.04:0,27,288	0/0:28,0:21:41.34:0,41,442	0/0:23,0:21:45.07:0,45,474	0/0:18,0:18:54.03:0,54,553	0/0:23,0:23:56.93:0,57,602	0/0:32,0:30:75.19:0,75,835	1/1:21,7:28:33.51:478,34,0	0/0:39,0:39:99:0,114,1238	0/0:20,0:20:51.11:0,51,562	0/0:10,0:10:27:0,27,275	0/0:22,0:22:57.13:0,57,633	0/0:32,0:32:81.16:0,81,884	0/0:24,0:24:57.13:0,57,634	0/0:30,0:28:66.16:0,66,734	1/1:29,0:27:69.13:717,69,0	0/0:26,0:26:74.98:0,75,812	1/1:20,0:20:36.07:372,36,0	0/0:23,0:22:42:0,42,429	0/0:19,0:19:45.09:0,45,498	0/0:41,0:43:99:0,102,1169	0/0:24,0:24:60.13:0,60,658	0/0:18,0:18:51.05:0,51,531	0/0:28,0:28:78.17:0,78,855	0/0:26,0:26:63.10:0,63,687	0/0:24,0:24:51.10:0,51,568	0/0:21,0:21:54.12:0,54,601	1/1:0,3:6:11.53:151,12,0
chr10	98240684	.	C	CCT	2300.57	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=0.916;DP=682;FS=0.978;HRun=0;HaplotypeScore=90.0947;InbreedingCoeff=0.6568;MQ=72.83;MQ0=9;MQRankSum=-2.524;QD=20.18;ReadPosRankSum=1.571;VQSLOD=3.8219;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:26.22:370,0,26	0/0:10,0:10:30.09:0,30,428	0/0:29,0:20:47.44:0,47,673	0/0:25,0:23:53.22:0,53,739	0/0:19,0:19:54.18:0,54,770	0/0:23,0:23:63.19:0,63,914	0/0:32,0:30:84.25:0,84,1225	0/1:28,0:26:99:128,0,235	0/0:39,0:39:99:0,114,1725	0/0:21,0:20:57.17:0,57,828	0/0:10,0:10:30.05:0,30,406	0/0:23,0:23:66.17:0,66,939	0/0:32,0:32:92.98:0,93,1304	0/0:24,0:24:69.19:0,69,976	0/0:30,0:28:78.23:0,78,1116	1/1:11,20:28:72.23:1237,72,0	0/0:26,0:26:77.75:0,78,1152	1/1:0,20:20:36.12:646,36,0	0/0:23,0:21:54.13:0,54,734	0/0:19,0:19:57.13:0,57,786	0/0:43,0:43:99:0,129,1785	0/0:24,0:24:69.14:0,69,972	0/0:18,0:18:51.17:0,51,743	0/0:28,0:28:81.26:0,81,1212	0/0:27,0:27:75.20:0,75,1049	0/0:22,0:22:63.17:0,63,885	0/0:21,0:21:63.17:0,63,899	1/1:7,0:6:4.01:67,4,0
chr10	98243043	.	TG	T	786.46	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.961;DP=793;FS=2.934;HRun=1;HaplotypeScore=92.1268;InbreedingCoeff=0.9995;MQ=89.88;MQ0=0;MQRankSum=-2.807;QD=37.45;ReadPosRankSum=-0.154;VQSLOD=3.8303;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,159,2464	0/0:11,0:11:33.11:0,33,527	0/0:37,0:37:99:0,102,1439	0/0:44,0:43:99:0,106,1482	0/0:22,0:22:66.21:0,66,1028	0/0:26,0:26:78.27:0,78,1247	0/0:41,0:41:99:0,123,1944	0/0:35,0:35:99:0,105,1677	0/0:22,0:22:66.23:0,66,1054	0/0:30,0:30:90.31:0,90,1438	0/0:13,0:13:36.09:0,36,527	0/0:34,0:34:99:0,99,1583	0/0:25,0:25:72.25:0,72,1151	0/0:27,0:27:78.27:0,78,1237	0/0:32,0:32:96.33:0,96,1533	1/1:0,21:21:63.21:881,63,0	0/0:31,0:31:93.32:0,93,1487	0/0:20,0:20:60.20:0,60,959	0/0:13,0:13:39.13:0,39,621	0/0:27,0:27:81.28:0,81,1289	0/0:58,0:58:99:0,172,2725	0/0:22,0:22:66.21:0,66,1032	0/0:24,0:24:72.25:0,72,1151	0/0:38,0:38:99:0,108,1726	0/0:22,0:22:60.20:0,60,959	0/0:23,0:23:66.19:0,66,1027	0/0:25,0:25:75.26:0,75,1192	0/0:16,0:16:48.16:0,48,766
chr10	98244871	.	A	AC	3094.24	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.637;DP=734;FS=2.115;HRun=1;HaplotypeScore=77.2036;InbreedingCoeff=0.9970;MQ=87.31;MQ0=0;MQRankSum=-2.363;QD=41.26;ReadPosRankSum=-2.068;VQSLOD=3.3532;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,138,1930	0/0:12,0:12:33.11:0,33,461	0/0:28,0:28:77.65:0,78,960	0/0:25,0:25:63.02:0,63,733	0/0:37,0:37:99:0,111,1532	0/0:20,0:20:57.19:0,57,797	0/0:21,0:21:54.18:0,54,755	1/1:0,42:41:99:1799,117,0	0/0:25,0:25:72.24:0,72,1007	0/0:31,0:31:90.29:0,90,1243	0/0:18,0:18:51.17:0,51,713	0/0:21,0:21:63.19:0,63,860	0/0:34,0:34:99:0,102,1408	0/0:25,0:25:72.22:0,72,989	0/0:29,0:29:81.27:0,81,1131	1/1:0,24:24:72.25:1150,72,0	0/0:34,0:34:99:0,99,1366	0/0:18,0:18:54.14:0,54,732	0/0:21,0:21:63.20:0,63,860	0/0:23,0:23:66.22:0,66,923	0/0:43,0:43:99:0,120,1660	0/0:16,0:16:48.16:0,48,669	0/0:24,0:24:66.21:0,66,906	0/0:35,0:35:96.32:0,96,1337	0/0:14,0:14:42.13:0,42,571	0/0:29,0:29:81.27:0,81,1132	0/0:26,0:25:78.26:0,78,1091	1/1:0,9:9:18.06:288,18,0
chr10	98244931	.	GCCCGCGTT	G	4117.56	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.268;DP=594;FS=6.427;HRun=0;HaplotypeScore=151.6319;InbreedingCoeff=0.9789;MQ=88.45;MQ0=0;MQRankSum=-8.963;QD=82.35;ReadPosRankSum=-1.723;VQSLOD=3.1303;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,4988	0/0:11,0:11:33.11:0,33,1519	0/0:26,0:26:74.93:0,75,3091	0/0:19,0:19:57.13:0,57,2280	0/0:29,0:29:84.27:0,84,3771	0/0:14,0:14:39.13:0,39,1776	0/0:25,0:25:75.24:0,75,3249	1/1:0,19:19:57.18:1522,57,0	0/0:26,0:26:72.25:0,72,3252	0/0:24,0:24:72.25:0,72,3340	0/0:13,0:13:39.13:0,39,1803	0/0:20,0:20:57.20:0,57,2609	0/0:26,0:26:78.25:0,78,3328	0/0:15,0:15:45.15:0,45,2069	0/0:18,0:18:54.19:0,54,2500	1/1:1,21:22:63.22:1886,63,0	0/0:36,0:36:99:0,108,4771	1/1:1,5:6:15.05:438,15,0	0/0:15,0:15:45.15:0,45,1939	0/0:15,0:15:45.15:0,45,2083	0/0:29,0:29:84.29:0,84,3525	0/0:20,0:20:60.16:0,60,2624	0/0:15,0:15:45.15:0,45,1930	0/0:34,0:34:99:0,102,4566	0/0:20,0:20:57.20:0,57,2560	0/0:30,0:30:90.30:0,90,3855	0/0:26,0:25:78.27:0,78,3549	1/1:0,3:3:9.03:272,9,0
chr10	98245007	.	G	GA	3453.69	PASS	AB=0.945;AC=34;AF=0.607;AN=56;BaseQRankSum=1.635;DP=538;FS=16.772;HRun=13;HaplotypeScore=95.3174;InbreedingCoeff=0.6932;MQ=70.29;MQ0=1;MQRankSum=1.333;QD=8.99;ReadPosRankSum=-4.148;VQSLOD=0.1091;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:31:25.99:147,26,0	0/0:8,0:8:11.47:0,11,81	0/0:11,0:10:5.88:0,6,40	0/0:12,0:12:11.55:0,12,80	0/1:22,1:25:0.12:0,0,128	1/1:5,8:14:9.18:196,9,0	1/1:8,10:19:11.65:135,12,0	1/1:10,2:23:45.03:264,45,0	1/1:4,9:14:11.85:98,12,0	0/1:16,1:17:1.27:1,0,136	0/0:15,2:17:4.81:0,5,178	1/1:9,9:19:11.96:127,12,0	1/1:10,16:26:28.66:268,29,0	1/1:9,13:22:12.87:247,13,0	1/1:12,11:25:51.08:416,51,0	1/1:10,0:13:14.98:92,15,0	0/0:29,1:31:19.72:0,20,267	0/0:1,0:11:14.73:0,15,45	0/1:18,2:20:24.05:24,0,150	0/0:19,0:20:19.97:0,20,249	0/0:19,0:20:26.58:0,27,183	1/1:4,10:14:24.79:205,25,0	1/1:8,6:15:30.23:242,30,0	1/1:16,11:29:70.88:561,71,0	0/1:26,1:28:48.92:49,0,100	1/1:11,8:19:31.53:266,32,0	0/0:23,0:24:15.87:0,16,244	1/1:5,1:10:17.95:115,18,0
chr10	98245065	.	T	TA	832.48	PASS	AB=0.935;AC=19;AF=0.339;AN=56;BaseQRankSum=-0.630;DP=541;FS=6.905;HRun=15;HaplotypeScore=118.2911;InbreedingCoeff=-0.0746;MQ=68.71;MQ0=1;MQRankSum=-0.074;QD=3.08;ReadPosRankSum=-2.632;VQSLOD=0.1831;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,1:20:0.03:0,0,102	0/1:5,0:5:9.08:9,0,46	0/0:28,0:17:14.57:0,15,80	0/0:21,0:19:10.01:0,10,79	0/0:26,0:29:9.49:0,9,118	0/1:17,1:19:7.30:7,0,127	0/0:20,1:21:5.24:0,5,128	1/1:9,7:17:5.80:147,6,0	0/1:11,1:12:1.66:2,0,102	0/0:22,0:23:8.91:0,9,160	0/1:15,1:17:21.45:51,0,21	0/1:13,2:16:36.20:47,0,36	0/0:16,0:18:15.40:0,15,83	0/1:16,0:16:5.45:5,0,71	0/0:22,0:22:34.86:0,35,213	1/1:9,3:16:29.35:196,29,0	0/0:25,0:27:1.97:0,2,199	0/1:13,5:20:6.63:235,0,7	0/1:14,0:16:9.50:9,0,50	0/0:25,1:26:22.01:0,22,199	0/0:11,0:11:13.56:0,14,77	0/1:15,1:16:31.69:32,0,43	0/1:19,0:19:44.18:44,0,66	0/1:16,1:17:4.88:5,0,85	0/0:22,0:22:16.82:0,17,107	0/1:20,2:22:47.13:47,0,95	0/1:19,0:22:13.19:13,0,105	1/1:10,10:20:5.73:140,6,0
chr10	98249414	.	GT	G	6939.15	PASS	AB=0.882;AC=25;AF=0.446;AN=56;BaseQRankSum=14.589;DP=685;FS=0.296;HRun=9;HaplotypeScore=68.8527;InbreedingCoeff=0.9206;MQ=67.95;MQ0=0;MQRankSum=-0.606;QD=21.96;ReadPosRankSum=2.415;VQSLOD=5.6807;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,105,1194	0/0:13,0:13:39.11:0,39,441	0/1:13,2:11:43.61:44,0,92	0/0:22,0:18:41.09:0,41,424	0/0:29,0:29:75.22:0,75,865	1/1:1,24:25:53.90:482,54,0	1/1:3,14:17:17.07:283,17,0	0/0:31,0:31:81.14:0,81,911	1/1:2,17:19:45.02:412,45,0	0/0:30,0:30:87.26:0,87,1003	0/0:30,0:30:78.23:0,78,900	1/1:3,23:26:66.04:604,66,0	1/1:2,26:28:78.04:714,78,0	1/1:3,20:23:54.03:494,54,0	1/1:0,26:26:78.04:714,78,0	1/1:2,28:30:81.04:741,81,0	0/0:24,0:25:68.22:0,68,757	0/0:20,2:23:11.10:0,11,617	0/0:29,0:29:72.20:0,72,821	0/0:30,0:30:78.22:0,78,890	0/0:18,0:18:48.13:0,48,544	1/1:4,19:23:48.01:439,48,0	1/1:2,19:21:54.03:494,54,0	1/1:1,21:22:59.19:571,59,0	0/0:17,0:17:45.12:0,45,511	1/1:2,39:41:48.06:947,48,0	0/0:25,0:25:72.20:0,72,820	0/0:7,0:7:21.06:0,21,242
chr10	98250431	.	GAA	G	3584.79	PASS	AB=0.609;AC=25;AF=0.446;AN=56;BaseQRankSum=3.998;DP=497;FS=15.643;HRun=14;HaplotypeScore=71.3758;InbreedingCoeff=0.9037;MQ=76.58;MQ0=1;MQRankSum=0.464;QD=15.52;ReadPosRankSum=4.743;VQSLOD=0.9699;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:24:44.54:0,45,423	0/0:9,0:9:21.06:0,21,279	0/0:21,0:17:10.86:0,11,118	0/0:10,0:9:10.77:0,11,82	0/0:23,1:25:20.23:0,20,525	1/1:4,14:19:35.74:317,36,0	1/1:4,12:17:23.84:269,24,0	0/0:21,0:23:44.09:0,44,515	1/1:1,18:22:56.28:479,56,0	0/0:12,0:13:26.38:0,26,273	0/0:13,0:17:44.07:0,44,474	1/1:4,12:16:36.01:332,36,0	1/1:9,15:24:32.96:305,33,0	1/1:3,15:19:35.84:380,36,0	1/1:6,9:15:26.92:250,27,0	1/1:4,10:14:26.97:250,27,0	0/0:25,0:25:69.21:0,69,934	0/1:5,2:14:26.03:26,0,113	0/0:12,0:14:26.03:0,26,275	0/0:16,0:18:41.60:0,42,498	0/0:11,0:13:29.55:0,30,326	1/1:4,12:17:26.81:297,27,0	1/1:9,8:17:17.95:167,18,0	1/1:6,15:21:13.58:332,14,0	0/0:15,1:16:11.32:0,11,415	1/1:6,7:15:17.45:181,17,0	0/0:25,0:26:72.13:0,72,850	0/0:8,0:10:23.53:0,24,269
chr10	98251179	.	T	TAAGAC	17401.52	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-5.345;DP=515;FS=2.507;HRun=0;HaplotypeScore=99.1601;InbreedingCoeff=0.9957;MQ=95.37;MQ0=0;MQRankSum=-11.594;QD=74.68;ReadPosRankSum=0.126;VQSLOD=6.1879;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.23:0,72,1454	0/0:6,0:6:18.06:0,18,373	0/0:30,0:30:65.89:0,66,1257	0/0:24,0:24:54.21:0,54,977	0/0:18,0:18:51.18:0,51,1047	1/1:6,16:22:60.16:1738,60,0	1/1:9,13:22:51.13:1467,51,0	0/0:31,0:31:81.26:0,81,1560	1/1:1,12:13:39.13:1187,39,0	0/0:13,0:13:33.11:0,33,684	0/0:14,0:14:39.13:0,39,809	1/1:2,15:17:48.16:1470,48,0	1/1:3,23:26:66.23:1998,66,0	1/1:4,19:24:69.24:2035,69,0	1/1:7,20:27:66.23:2009,66,0	1/1:3,13:17:45.11:1279,45,0	0/0:29,0:29:78.27:0,78,1582	0/0:14,0:14:39.13:0,39,809	0/0:11,0:11:27.09:0,27,557	0/0:14,0:14:42.14:0,42,871	0/0:22,0:22:60.21:0,60,1243	1/1:2,13:15:45.15:1310,45,0	1/1:6,10:16:36.08:947,36,0	1/1:6,9:15:15:387,15,0	0/0:10,0:10:27.09:0,27,560	1/1:3,15:19:54.15:1574,54,0	0/0:14,0:14:39.13:0,39,809	0/0:7,0:7:21.07:0,21,435
chr10	98251356	.	GAA	G	2292.11	PASS	AB=0.629;AC=22;AF=0.393;AN=56;BaseQRankSum=-2.290;DP=469;FS=8.490;HRun=15;HaplotypeScore=65.4977;InbreedingCoeff=0.7682;MQ=71.82;MQ0=14;MQRankSum=-1.225;QD=13.17;ReadPosRankSum=4.822;VQSLOD=2.2515;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:27.86:0,28,421	0/0:8,0:9:3.02:0,3,139	0/0:44,0:17:15.80:0,16,142	0/0:24,0:9:8.87:0,9,70	0/0:18,0:19:47.60:0,48,563	1/1:3,7:11:17.89:203,18,0	1/1:3,11:14:4.02:256,4,0	0/0:10,0:22:44.05:0,44,236	1/1:0,12:12:29.99:264,30,0	0/0:15,0:15:35.94:0,36,442	0/0:14,0:14:26.55:0,27,304	1/1:4,2:7:14.65:105,15,0	1/1:3,10:13:29.71:249,30,0	1/1:9,11:22:26.48:313,26,0	1/1:5,11:18:8.66:168,9,0	1/1:4,10:14:23.95:211,24,0	0/0:9,0:18:44.39:0,44,409	0/0:4,1:16:1.40:0,1,60	0/0:7,0:17:38.78:0,39,349	0/0:10,0:22:33.40:0,33,315	0/0:2,0:8:9.01:0,9,85	1/1:4,11:15:8.66:240,9,0	0/1:4,9:12:5.50:137,0,5	0/1:6,5:11:2.39:97,0,2	0/0:12,0:13:32.96:0,33,344	1/1:14,6:21:22.89:253,23,0	0/0:14,0:20:40.91:0,41,350	0/0:7,0:11:7.97:0,8,40
chr10	98253178	.	TTAAAAAAAAA	T	930.93	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=6.782;DP=601;FS=1.868;HRun=0;HaplotypeScore=155.4863;InbreedingCoeff=0.6351;MQ=56.27;MQ0=44;MQRankSum=-6.982;QD=20.69;ReadPosRankSum=4.365;VQSLOD=2.5869;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:24:99:215,0,269	0/0:9,0:9:27.05:0,27,983	0/0:66,0:14:38.52:0,39,684	0/0:64,0:7:15.01:0,15,164	0/0:23,0:22:60.09:0,60,1605	0/0:16,0:16:29.29:0,29,380	0/0:13,0:12:25.38:0,25,310	0/0:24,0:20:56.37:0,56,602	0/0:19,0:18:37.90:0,38,448	0/0:20,0:20:55.03:0,55,1544	0/0:21,0:20:54.13:0,54,1595	0/0:16,0:15:38.63:0,39,427	0/0:17,0:17:43.22:0,43,474	0/0:11,0:10:25.95:0,26,317	0/0:14,0:14:31.51:0,32,413	1/1:3,16:18:27.09:822,27,0	0/0:16,0:14:42.14:0,42,1645	0/0:20,0:18:48.10:0,48,1265	0/0:18,0:17:51.12:0,51,1585	0/0:20,0:20:57.14:0,57,1675	0/0:12,0:12:33.02:0,33,865	0/0:16,0:15:41.47:0,41,401	0/0:18,0:17:28.79:0,29,518	0/0:10,0:9:21.42:0,21,268	0/0:18,0:18:51.17:0,51,2013	0/0:19,0:19:51.07:0,51,644	0/0:23,0:21:60.05:0,60,1478	0/0:32,0:24:52.14:0,52,568
chr10	98255922	.	TC	T	2426.71	PASS	AB=0.856;AC=31;AF=0.554;AN=56;BaseQRankSum=2.353;DP=443;FS=31.434;HRun=11;HaplotypeScore=55.9063;InbreedingCoeff=0.4666;MQ=71.53;MQ0=1;MQRankSum=0.699;QD=7.98;ReadPosRankSum=4.200;VQSLOD=0.1202;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:29:10.93:76,11,0	0/1:6,1:7:13.03:13,0,56	0/1:17,0:9:12.47:12,0,65	0/1:10,0:9:9.21:9,0,41	0/0:21,0:21:37:0,37,300	1/1:7,11:19:17:129,17,0	1/1:9,18:27:41.71:343,42,0	1/1:17,1:19:8.34:39,8,0	1/1:7,7:14:23.94:194,24,0	0/1:14,3:17:9.09:9,0,176	0/1:11,2:13:12.94:13,0,185	1/1:9,10:19:4.49:239,4,0	0/1:2,7:9:3.24:148,0,3	1/1:4,5:10:23.73:187,24,0	1/1:4,17:22:37.08:299,37,0	0/0:11,0:12:6.41:0,6,91	0/0:23,3:26:15.23:0,15,513	0/0:18,0:18:17.25:0,17,115	0/0:11,0:11:14.61:0,15,129	0/0:9,0:9:10.80:0,11,82	0/0:16,0:16:9.34:0,9,238	1/1:0,13:13:26.72:192,27,0	1/1:3,6:9:11.98:98,12,0	1/1:5,13:18:32.94:271,33,0	0/0:11,0:11:11.69:0,12,98	1/1:5,13:18:38.29:283,38,0	0/0:14,0:15:2.87:0,3,15	0/1:11,1:12:2.27:67,0,2
chr10	98255932	.	C	CT	285.86	PASS	AB=0.967;AC=6;AF=0.107;AN=56;BaseQRankSum=4.173;DP=453;FS=0.000;HRun=0;HaplotypeScore=78.8908;InbreedingCoeff=0.3514;MQ=69.03;MQ0=1;MQRankSum=-0.399;QD=3.86;ReadPosRankSum=-2.760;VQSLOD=2.6444;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,25:31:5:226,5,0	0/0:8,0:8:11.35:0,11,92	0/0:15,0:7:13.85:0,14,146	0/0:12,0:10:8.99:0,9,109	0/0:18,0:18:32.99:0,33,445	0/0:18,0:18:29.35:0,29,191	0/0:25,0:25:47.92:0,48,284	1/1:15,0:15:0.95:109,1,0	0/0:13,0:13:25.10:0,25,138	0/0:16,0:16:40.44:0,40,401	0/0:15,0:15:15.69:0,16,310	0/0:16,0:16:38.04:0,38,236	0/0:17,0:17:32.14:0,32,200	0/0:10,0:10:27.48:0,27,154	0/0:24,0:24:49.74:0,50,313	0/1:13,1:14:17.92:22,0,18	0/0:34,0:34:70.62:0,71,878	0/0:20,0:20:17.05:0,17,116	0/0:10,0:10:23.94:0,24,251	0/0:7,0:7:11.69:0,12,97	0/0:13,0:13:28.91:0,29,376	0/0:16,0:16:4.89:0,5,81	0/0:12,0:12:20.36:0,20,133	0/0:15,0:15:37.83:0,38,233	0/0:10,0:10:15.03:0,15,170	0/0:15,0:15:8.63:0,9,110	0/0:20,0:20:5.92:0,6,67	0/1:13,0:13:37.51:44,0,38
chr10	98255933	.	C	CT	687.66	PASS	AB=0.882;AC=13;AF=0.232;AN=56;BaseQRankSum=1.633;DP=451;FS=2.119;HRun=8;HaplotypeScore=75.4539;InbreedingCoeff=0.5992;MQ=68.14;MQ0=1;MQRankSum=-0.730;QD=4.71;ReadPosRankSum=-3.374;VQSLOD=-0.2926;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:34.14:305,34,0	0/0:7,0:7:5.42:0,5,43	0/0:15,0:7:4.14:0,4,70	0/0:11,0:9:10.13:0,10,80	0/1:17,0:17:7.15:7,0,84	0/0:18,0:18:20.35:0,20,153	0/0:25,0:25:45.69:0,46,279	1/1:14,0:14:26.41:164,26,0	0/0:15,0:15:23.36:0,23,141	0/0:15,0:15:17.91:0,18,156	0/1:15,0:15:9.91:10,0,81	0/0:16,0:16:35.15:0,35,209	0/0:17,0:17:29.30:0,29,180	0/0:10,0:10:20.42:0,20,117	0/0:26,0:26:46.68:0,47,274	1/1:5,0:15:11.27:75,11,0	0/0:34,0:34:62.74:0,63,532	1/1:3,17:20:12.51:137,13,0	0/0:11,0:11:19.45:0,19,169	0/0:6,0:6:8.97:0,9,73	0/0:13,1:13:6.56:0,7,125	0/0:16,0:16:14.33:0,14,88	0/0:12,0:12:20.45:0,20,138	0/0:15,0:15:38.07:0,38,231	0/0:7,0:7:2.96:0,3,23	0/0:15,0:15:17.45:0,17,101	0/1:9,0:20:21.07:21,0,48	1/1:13,0:13:25.76:144,26,0
chr10	98256368	.	TACACACACAC	T	1192.21	PASS	AB=0.809;AC=16;AF=0.381;AN=42;BaseQRankSum=3.176;DP=289;FS=4.012;HRun=0;HaplotypeScore=83.8244;InbreedingCoeff=0.4909;MQ=68.87;MQ0=12;MQRankSum=-3.611;QD=16.56;ReadPosRankSum=1.588;VQSLOD=1.6644;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:24.08:0,24,480	0/0:2,0:2:2.61:0,3,147	./.	./.	./.	1/1:5,2:6:6.02:178,6,0	./.	0/0:12,0:12:0.47:0,0,1	1/1:5,2:8:9.03:247,9,0	0/0:6,0:7:6.02:0,6,238	0/0:4,0:5:9.03:0,9,373	0/1:7,2:9:94.91:169,0,95	1/1:8,3:11:6.02:178,6,0	./.	1/1:3,3:6:3.01:89,3,0	0/0:4,0:9:10.79:0,11,56	0/0:32,0:32:54.19:0,54,2382	0/1:9,3:12:84.45:169,0,84	0/0:7,0:7:4.83:0,5,139	./.	0/0:15,0:13:30.08:0,30,1034	1/1:2,3:5:5.98:109,6,0	1/1:5,2:7:2.97:89,3,0	./.	0/0:6,0:5:12.04:0,12,551	1/1:5,2:7:5.99:111,6,0	0/0:8,0:9:12.04:0,12,501	0/0:4,0:4:12.04:0,12,504
chr10	98256465	.	CCCA	C	942.35	PASS	AB=1.000;AC=20;AF=0.400;AN=50;BaseQRankSum=-0.516;DP=137;FS=0.000;HRun=0;HaplotypeScore=28.5761;InbreedingCoeff=0.5657;MQ=81.59;MQ0=1;MQRankSum=-0.907;QD=12.73;ReadPosRankSum=-0.316;VQSLOD=2.7092;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:12.02:123,12,0	0/0:3,0:3:8.99:0,9,97	0/0:8,0:7:7.80:0,8,53	0/0:12,0:7:15.07:0,15,147	0/0:7,0:7:6.01:0,6,69	1/1:4,0:4:8.99:76,9,0	1/1:5,0:5:8.94:67,9,0	1/1:6,0:6:6:52,6,0	1/1:5,0:5:8.90:86,9,0	0/0:4,0:4:5.99:0,6,52	0/0:2,0:2:6:0,6,58	0/0:3,0:3:5.32:0,5,27	0/1:4,0:4:5.07:33,0,5	./.	./.	1/1:9,0:9:14.42:109,14,0	0/0:5,0:5:9.03:0,9,115	1/1:2,12:14:33.11:528,33,0	0/0:3,0:3:3.88:0,4,29	0/0:2,0:2:5.98:0,6,70	0/1:9,0:9:5.94:6,0,83	0/0:3,0:3:5.31:0,5,26	0/0:1,0:1:2.22:0,2,7	./.	0/0:3,0:3:8.94:0,9,107	1/1:1,0:1:2.98:21,3,0	0/0:6,0:6:11.83:0,12,114	1/1:1,0:1:2.60:10,3,0
chr10	98256468	.	ACCACCC	A	289.63	PASS	AB=1.000;AC=7;AF=0.140;AN=50;BaseQRankSum=0.249;DP=134;FS=4.035;HRun=0;HaplotypeScore=35.3999;InbreedingCoeff=0.2138;MQ=76.46;MQ0=1;MQRankSum=-0.116;QD=6.03;ReadPosRankSum=0.878;VQSLOD=1.0769;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:15:12.04:280,12,0	0/0:3,0:3:8.99:0,9,137	0/0:6,0:5:11.86:0,12,118	0/0:12,0:7:16.64:0,17,153	0/0:6,0:6:6.02:0,6,159	0/0:4,0:4:4.10:0,4,46	0/1:5,0:5:19.12:37,0,19	1/1:5,0:5:6:51,6,0	0/0:4,0:4:10:0,10,63	0/0:4,0:4:7.58:0,8,135	0/0:2,0:2:6.01:0,6,89	0/0:3,0:3:6.02:0,6,104	0/0:5,0:5:9:0,9,105	./.	./.	0/1:9,0:9:20.30:32,0,20	0/0:4,0:4:9.03:0,9,231	0/1:14,0:14:11.96:12,0,12	0/0:3,0:3:3.89:0,4,29	0/0:3,0:3:6.02:0,6,155	0/0:10,0:11:20.39:0,20,257	0/0:3,0:3:6.02:0,6,116	0/0:1,0:1:3.01:0,3,54	./.	0/0:3,0:3:9.03:0,9,227	0/0:1,0:1:1.82:0,2,5	0/0:6,0:6:12.04:0,12,273	0/0:1,0:1:3.01:0,3,39
chr10	98256528	.	T	TC	691.91	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.991;DP=247;FS=6.450;HRun=5;HaplotypeScore=30.4893;InbreedingCoeff=0.7284;MQ=97.21;MQ0=0;MQRankSum=0.252;QD=27.68;ReadPosRankSum=-2.601;VQSLOD=1.5758;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.08:0,63,650	0/0:4,0:4:12.03:0,12,129	0/0:12,0:11:22.69:0,23,256	0/0:15,0:15:19.32:0,19,344	0/0:4,0:4:12.02:0,12,122	0/0:8,0:8:21.04:0,21,219	0/0:13,0:13:39.09:0,39,413	1/1:3,16:19:48.11:612,48,0	0/0:7,0:7:18.05:0,18,193	0/0:3,0:3:3:0,3,32	0/0:4,0:4:10.27:0,10,100	0/0:7,0:7:20.79:0,21,193	0/0:9,0:9:27.07:0,27,289	0/0:6,0:6:18.03:0,18,186	0/0:10,0:10:27.06:0,27,283	0/0:12,0:12:36:0,36,366	0/0:2,0:2:3.01:0,3,32	0/0:21,0:21:51.12:0,51,546	0/0:8,0:8:18.04:0,18,187	0/0:4,0:4:12.03:0,12,129	0/0:13,0:13:33.08:0,33,347	0/0:5,0:5:15.03:0,15,155	0/0:7,0:7:15.04:0,15,161	0/0:7,0:7:21.05:0,21,222	0/0:4,0:4:9.02:0,9,97	0/0:5,0:5:12.03:0,12,129	0/0:8,0:8:24.06:0,24,258	1/1:1,5:6:15.05:197,15,0
chr10	98257120	.	C	CTGGGGA	2619.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.568;DP=570;FS=0.000;HRun=0;HaplotypeScore=123.2811;InbreedingCoeff=0.9855;MQ=81.09;MQ0=0;MQRankSum=-8.327;QD=62.38;ReadPosRankSum=-2.107;VQSLOD=3.4201;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,29:42:84.29:2715,84,0	0/0:8,0:8:21.07:0,21,467	0/0:15,0:15:34.30:0,34,742	0/0:19,0:18:33.11:0,33,716	0/0:10,0:10:27.09:0,27,594	0/0:22,0:22:57.20:0,57,1291	0/0:31,0:31:87.27:0,87,1863	0/0:20,0:20:45.15:0,45,997	0/0:16,0:16:42.14:0,42,958	0/0:17,0:17:39.13:0,39,837	0/0:16,0:16:36.06:0,36,803	0/0:19,0:19:57.20:0,57,1302	0/0:18,0:18:48.15:0,48,1053	0/0:15,0:15:45.15:0,45,1026	0/0:23,0:23:57.18:0,57,1258	0/0:26,0:26:69.24:0,69,1577	0/0:46,0:46:99:0,135,2982	0/0:26,0:26:66.17:0,66,1393	0/0:14,0:14:36.12:0,36,807	0/0:12,0:12:33.11:0,33,735	0/0:33,0:33:87.28:0,87,1911	0/0:12,0:12:30.09:0,30,618	0/0:20,0:20:60.21:0,60,1341	0/0:22,0:22:60.16:0,60,1322	0/0:18,0:18:45.15:0,45,1007	0/0:28,0:28:72.22:0,72,1559	0/0:16,0:16:42.12:0,42,873	0/0:6,0:6:18.06:0,18,380
chr10	98259091	.	G	GT	810.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.528;DP=662;FS=6.777;HRun=6;HaplotypeScore=66.0876;InbreedingCoeff=0.9984;MQ=62.76;MQ0=5;MQRankSum=1.716;QD=24.57;ReadPosRankSum=2.592;VQSLOD=3.7454;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:33:72.23:906,72,0	0/0:11,0:11:33.06:0,33,330	0/0:28,0:17:39.07:0,39,386	0/0:33,0:26:49.65:0,50,417	0/0:24,0:24:66.15:0,66,673	0/0:28,0:28:81.18:0,81,826	0/0:27,0:27:81.17:0,81,819	0/0:38,0:38:99:0,105,1039	0/0:17,0:17:50.70:0,51,499	0/0:24,0:24:66.01:0,66,653	0/0:12,0:12:30.06:0,30,306	0/0:32,0:32:87.18:0,87,881	0/0:30,0:30:84.19:0,84,856	0/0:16,0:16:42.09:0,42,428	0/0:29,0:29:81.17:0,81,820	0/0:13,0:13:36.07:0,36,361	0/0:31,0:31:92.77:0,93,918	0/0:24,0:24:60.13:0,60,611	0/0:16,0:16:45.09:0,45,457	0/0:14,0:14:30.06:0,30,303	0/0:23,0:22:63.12:0,63,635	0/0:17,0:17:48.09:0,48,483	0/0:25,0:25:66.14:0,66,673	0/0:34,0:34:84.18:0,84,856	0/0:25,0:25:72.13:0,72,725	0/0:22,0:22:63.14:0,63,642	0/0:20,0:20:54.12:0,54,549	0/0:14,0:14:41.97:0,42,404
chr10	98259904	.	CCTCTCTCT	C	1281.33	PASS	AB=0.929;AC=14;AF=0.280;AN=50;BaseQRankSum=-0.723;DP=539;FS=12.343;HRun=0;HaplotypeScore=127.9078;InbreedingCoeff=0.4388;MQ=73.13;MQ0=23;MQRankSum=2.309;QD=9.63;ReadPosRankSum=3.117;VQSLOD=1.5361;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:47:27.98:0,28,876	0/0:7,0:6:3.47:0,3,25	0/0:29,0:19:6:0,6,67	0/0:47,0:25:0.47:0,0,1	0/1:12,0:12:61.80:62,0,241	1/1:10,0:10:2.79:74,3,0	./.	0/0:43,0:43:8.15:0,8,105	1/1:12,0:12:6.02:139,6,0	0/0:19,0:19:9.92:0,10,260	0/0:9,0:9:3.01:0,3,100	0/1:6,0:10:1.68:37,0,2	1/1:15,0:14:12.04:295,12,0	1/1:11,0:11:9.03:215,9,0	1/1:15,0:15:18.05:364,18,0	./.	0/0:15,0:14:27.04:0,27,576	0/1:20,0:15:1.93:238,0,2	0/0:16,0:16:8.24:0,8,231	0/0:19,0:19:12.02:0,12,199	0/0:21,0:20:26.88:0,27,605	./.	0/0:5,4:9:0:0,0,0	0/0:15,12:22:0.47:0,0,1	0/0:13,0:13:12.04:0,12,323	0/1:28,0:28:0.73:1,0,238	0/0:25,0:25:1.73:0,2,802	0/0:9,0:9:3.01:0,3,40
chr10	98259948	.	TCA	T	714.74	PASS	AB=0.965;AC=19;AF=0.396;AN=48;BaseQRankSum=-1.613;DP=509;FS=7.174;HRun=0;HaplotypeScore=105.2016;InbreedingCoeff=0.4817;MQ=44.33;MQ0=55;MQRankSum=-0.319;QD=2.50;ReadPosRankSum=1.518;VQSLOD=1.1885;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:60,0:53:0:0,0,0	./.	./.	./.	0/0:14,11:21:3:0,3,25	0/0:16,0:15:17.92:0,18,141	0/0:25,0:22:14.98:0,15,125	0/0:17,0:17:24.03:0,24,127	0/0:11,0:11:8.82:0,9,60	0/1:21,0:18:15.29:56,0,15	1/1:6,4:8:0.47:1,0,0	0/0:13,0:13:14.92:0,15,116	0/0:18,0:15:17.82:0,18,132	0/0:18,0:16:14.97:0,15,121	0/0:17,0:15:14.57:0,15,108	1/1:19,0:18:2.53:14,3,0	1/1:23,1:22:32.45:213,32,0	0/1:24,0:20:11.02:11,0,34	0/1:11,0:9:12.22:64,0,12	1/1:12,0:12:9.42:68,9,0	1/1:36,0:27:29.75:217,30,0	0/0:12,0:11:17.98:0,18,149	0/0:13,0:12:5.99:0,6,48	0/0:33,0:27:17.93:0,18,145	0/1:16,0:16:38.79:39,0,63	1/1:21,0:25:14.34:76,14,0	1/1:24,0:22:15.26:120,15,0	./.
chr10	98259991	.	CAG	C	190.38	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=6.223;DP=560;FS=2.018;HRun=0;HaplotypeScore=89.7159;InbreedingCoeff=0.8047;MQ=61.63;MQ0=39;MQRankSum=0.066;QD=2.44;ReadPosRankSum=0.035;VQSLOD=1.9358;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:47,0:45:0.01:0,0,0	0/0:5,0:5:14.97:0,15,123	0/0:28,0:12:26.18:0,26,271	0/0:39,0:20:23.42:0,23,302	0/0:20,0:18:20.98:0,21,196	0/0:22,0:20:44.97:0,45,494	0/0:26,0:25:60.03:0,60,615	0/0:29,0:29:57.06:0,57,528	0/0:14,0:14:29.98:0,30,301	0/0:15,0:12:24.80:0,25,250	0/0:13,0:11:20.27:0,20,173	0/0:18,0:18:40.20:0,40,415	0/0:22,0:20:45.01:0,45,474	0/0:12,0:10:24.01:0,24,306	0/0:15,0:14:32.94:0,33,356	1/1:1,12:12:2.90:27,3,0	0/0:25,0:24:37.33:0,37,256	1/1:17,0:17:43.57:271,44,0	0/0:15,0:11:24.14:0,24,202	0/0:10,0:10:24.08:0,24,173	0/0:44,0:37:61.09:0,61,475	0/0:12,0:12:30.04:0,30,383	0/0:14,0:13:32.98:0,33,317	0/0:34,0:33:56.97:0,57,601	0/0:13,0:13:28.18:0,28,294	0/0:15,0:15:32.60:0,33,234	0/0:15,0:15:24.48:0,24,191	0/0:7,0:5:8.99:0,9,74
chr10	98260106	.	C	CT	6277.46	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-10.626;DP=537;FS=17.416;HRun=10;HaplotypeScore=55.8059;InbreedingCoeff=0.9548;MQ=72.77;MQ0=0;MQRankSum=-0.926;QD=20.79;ReadPosRankSum=-0.337;VQSLOD=3.7005;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,38:45:96.24:1024,96,0	0/0:4,0:4:8.93:0,9,68	0/0:17,0:13:16.80:0,17,110	0/0:16,0:13:19.88:0,20,137	0/0:27,0:27:71.88:0,72,587	1/1:4,16:20:33.08:352,33,0	1/1:2,11:13:21.05:224,21,0	1/1:4,23:27:38.42:589,38,0	1/1:2,15:17:26.90:288,27,0	0/0:19,0:19:47.91:0,48,391	0/0:18,0:18:50.91:0,51,413	1/1:3,12:15:36.09:380,36,0	1/1:2,16:18:36.01:371,36,0	1/1:3,12:15:5.50:263,6,0	1/1:4,13:17:36.09:384,36,0	1/1:4,11:15:27.07:287,27,0	0/0:23,0:24:67.94:0,68,545	1/1:3,20:22:51.13:544,51,0	0/0:20,0:20:44.94:0,45,369	0/0:23,0:23:59.88:0,60,483	0/0:11,0:11:14.96:0,15,123	1/1:3,8:11:18.05:192,18,0	1/1:3,6:9:12.03:128,12,0	1/1:6,24:30:10.86:527,11,0	0/0:27,0:27:68.91:0,69,564	1/1:2,17:19:54.11:565,54,0	0/0:27,0:27:14.79:0,15,417	1/1:0,8:8:15.04:160,15,0
chr10	98264069	.	A	AAC	1512.12	PASS	AB=0.823;AC=23;AF=0.442;AN=52;BaseQRankSum=-0.633;DP=640;FS=1.391;HRun=0;HaplotypeScore=126.1285;InbreedingCoeff=0.1739;MQ=67.96;MQ0=9;MQRankSum=-1.029;QD=4.02;ReadPosRankSum=0.891;VQSLOD=2.6638;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:27:11.82:87,12,0	0/0:9,0:9:6.01:0,6,62	./.	./.	0/0:9,0:9:9.02:0,9,97	0/1:14,10:25:25.87:76,0,26	0/1:32,2:34:50.09:142,0,50	0/1:19,0:19:2.59:68,0,3	0/1:13,8:22:23.70:80,0,24	0/0:29,0:29:14.31:0,14,117	0/0:10,0:10:3:0,3,33	0/1:8,8:17:35.74:36,0,46	1/1:10,2:12:6.02:88,6,0	1/1:10,7:18:6.02:88,6,0	0/1:24,7:29:31.88:306,0,32	1/1:24,0:25:11.87:93,12,0	0/0:29,0:29:19.43:0,19,333	0/1:19,0:19:2.79:18,0,3	0/0:9,0:8:6:0,6,58	0/0:6,0:6:6:0,6,57	0/0:65,0:67:86.34:0,86,849	1/1:13,1:14:2.63:44,3,0	0/1:13,2:15:26.72:39,0,27	0/1:30,20:51:13.76:369,0,14	0/0:17,0:18:17.81:0,18,159	1/1:30,0:30:13.78:94,14,0	0/0:19,0:19:5.99:0,6,58	1/1:3,0:9:6:52,6,0
chr10	98264112	.	AGT	A	50.67	PASS	AB=0.938;AC=6;AF=0.107;AN=56;BaseQRankSum=5.588;DP=755;FS=55.556;HRun=0;HaplotypeScore=118.2314;InbreedingCoeff=0.5053;MQ=53.80;MQ0=18;MQRankSum=-0.257;QD=1.27;ReadPosRankSum=-1.273;VQSLOD=0.0643;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,1:7:9.02:99,9,0	0/1:6,1:7:24.76:25,0,290	0/0:49,0:23:50.05:0,50,709	0/0:55,0:23:50.83:0,51,543	0/0:12,0:12:32.60:0,33,513	0/0:31,0:30:56.97:0,57,908	0/0:30,2:31:21.01:0,21,1112	0/0:26,0:26:75.15:0,75,1147	0/0:24,0:24:54.12:0,54,842	0/0:21,0:21:48.87:0,49,887	0/0:11,0:11:33.10:0,33,550	0/0:28,0:27:53.91:0,54,782	0/0:23,0:23:57.24:0,57,815	0/0:23,0:23:43.94:0,44,552	0/0:37,0:35:68.67:0,69,1058	0/1:23,0:23:22.06:22,0,557	0/0:32,0:32:84.96:0,85,1333	1/1:3,0:3:3:25,3,0	0/0:15,1:16:13.81:0,14,630	0/0:18,0:17:45.15:0,45,731	0/0:100,1:100:99:0,146,3204	0/0:14,0:14:28.02:0,28,433	0/0:18,0:18:47.71:0,48,792	0/0:57,0:56:91.66:0,92,1650	0/0:15,1:15:40.79:0,41,601	0/0:30,1:29:36.29:0,36,1068	0/0:27,0:27:75.22:0,75,1237	0/0:12,0:12:21.54:0,22,366
chr10	98264216	.	GCACACACA	G	1782.07	PASS	AB=0.838;AC=20;AF=0.385;AN=52;BaseQRankSum=5.487;DP=542;FS=0.000;HRun=0;HaplotypeScore=139.1362;InbreedingCoeff=0.5715;MQ=53.90;MQ0=22;MQRankSum=-5.505;QD=6.58;ReadPosRankSum=-0.751;VQSLOD=2.4893;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:9:15.05:0,15,495	0/0:9,0:9:18.02:0,18,394	./.	./.	0/0:13,0:13:12.02:0,12,336	1/1:10,6:16:5.48:118,5,0	0/1:31,8:38:6.99:79,0,7	0/0:16,0:15:5.84:0,6,42	1/1:14,11:25:5.72:149,6,0	0/0:21,0:21:23.29:0,23,508	0/0:10,0:9:8.99:0,9,189	1/1:16,8:25:23.10:510,23,0	1/1:13,7:20:7.63:109,8,0	1/1:12,9:22:6.02:129,6,0	1/1:6,11:19:11.39:220,11,0	1/1:6,0:15:9:122,9,0	0/0:27,0:25:42.49:0,42,1022	0/0:5,0:5:12:0,12,174	0/0:13,0:13:9.50:0,10,263	0/0:12,0:12:15.05:0,15,460	0/0:71,0:69:52.49:0,52,1468	1/1:6,5:12:5.33:119,5,0	0/0:4,3:7:0:0,0,0	0/1:37,1:39:2.76:209,0,3	0/0:13,0:12:20.86:0,21,634	0/1:20,0:23:3.39:3,0,611	0/0:13,0:12:27.09:0,27,891	0/1:8,0:14:31.04:189,0,31
chr10	98265479	.	T	TCATAAAGAGGC	4298.39	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.158;DP=626;FS=0.000;HRun=0;HaplotypeScore=191.5239;InbreedingCoeff=0.9986;MQ=84.56;MQ0=0;MQRankSum=-8.895;QD=134.32;ReadPosRankSum=-0.047;VQSLOD=5.1460;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,4889	0/0:11,0:11:33.09:0,33,1095	0/0:20,0:20:57.19:0,57,1887	0/0:22,0:22:58.64:0,59,1527	0/0:18,0:18:51.18:0,51,1740	0/0:17,0:17:51.18:0,51,1768	0/0:25,0:25:72.25:0,72,2504	0/0:41,0:41:99:0,123,3925	0/0:20,0:20:54.19:0,54,1958	0/0:25,0:25:75.26:0,75,2647	0/0:17,0:17:48.16:0,48,1664	0/0:21,0:21:54.19:0,54,1815	0/0:20,0:20:57.20:0,57,1914	0/0:15,0:15:42.14:0,42,1506	0/0:29,0:29:81.28:0,81,2775	1/1:11,11:22:66.23:3152,66,0	0/0:25,0:25:69.24:0,69,2395	1/1:6,3:10:24.08:1146,24,0	0/0:19,0:19:57.20:0,57,1899	0/0:19,0:19:54.19:0,54,1920	0/0:35,0:35:99:0,99,3477	0/0:14,0:14:36.12:0,36,1243	0/0:11,0:11:33.11:0,33,1161	0/0:35,0:35:99:0,99,3492	0/0:20,0:20:60.21:0,60,2150	0/0:25,0:25:72.20:0,72,2456	0/0:28,0:27:75.23:0,75,2299	0/0:17,0:17:51.15:0,51,1764
chr10	98265603	.	C	CA	4397.50	PASS	AB=0.670;AC=44;AF=0.786;AN=56;BaseQRankSum=2.422;DP=579;FS=1.087;HRun=12;HaplotypeScore=77.9164;InbreedingCoeff=0.5436;MQ=64.08;MQ0=3;MQRankSum=-0.789;QD=9.18;ReadPosRankSum=0.577;VQSLOD=4.1385;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:19:33.54:163,34,0	1/1:4,10:14:5.13:212,5,0	0/1:23,0:10:2.47:2,0,3	0/0:20,0:7:14.35:0,14,86	0/0:36,3:40:15.85:0,16,519	1/1:5,1:16:9.07:64,9,0	1/1:0,1:11:5.68:29,6,0	0/0:22,0:24:18.92:0,19,191	1/1:3,0:16:11.36:57,11,0	1/1:10,14:24:19.20:485,19,0	1/1:4,14:19:42.03:347,42,0	1/1:1,0:15:13.18:62,13,0	1/1:3,0:15:3.39:25,3,0	1/1:6,0:12:10.24:46,10,0	0/1:6,0:25:11.29:52,0,11	1/1:23,0:23:58.17:337,58,0	0/1:6,19:28:4.25:251,0,4	1/1:22,0:22:46.54:207,47,0	1/1:10,9:17:14.11:288,14,0	1/1:18,2:30:54.20:329,54,0	1/1:5,8:13:15.02:146,15,0	1/1:3,2:13:8.50:43,8,0	1/1:7,1:22:29.94:149,30,0	1/1:2,0:11:17.11:97,17,0	1/1:4,31:37:52.88:648,53,0	1/1:6,2:28:47.26:262,47,0	0/1:3,18:21:23.96:99,0,24	0/0:16,0:16:16.88:0,17,259
chr10	98265606	.	A	AC	1330.45	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=-1.066;DP=573;FS=5.564;HRun=0;HaplotypeScore=83.0463;InbreedingCoeff=0.4855;MQ=62.96;MQ0=3;MQRankSum=1.237;QD=13.86;ReadPosRankSum=5.738;VQSLOD=4.3941;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:40.85:0,41,246	0/0:14,0:14:4.16:0,4,124	0/0:21,0:8:8.33:0,8,38	0/0:20,0:7:11.11:0,11,118	0/0:39,0:39:99:0,105,1319	0/0:16,0:16:26.58:0,27,198	0/0:12,0:11:5.90:0,6,36	0/0:24,0:24:62.05:0,62,656	0/0:17,0:17:23.25:0,23,162	0/0:25,0:25:6.25:0,6,198	0/0:19,0:19:5.37:0,5,88	0/0:16,0:16:17.51:0,18,114	0/0:14,0:14:11.90:0,12,88	0/0:11,0:11:17.32:0,17,111	0/0:24,0:24:26.50:0,27,207	1/1:1,24:25:60.18:793,60,0	0/0:28,0:28:3.67:0,4,201	1/1:19,2:21:60:655,60,0	0/0:20,0:18:10.52:0,11,157	0/0:28,0:28:49.92:0,50,335	0/1:11,0:11:3.57:4,0,18	0/0:12,0:12:20.47:0,20,137	0/0:23,0:23:42.38:0,42,261	0/0:11,0:11:6.85:0,7,69	0/1:39,0:39:2.29:2,0,147	0/0:26,0:26:63.71:0,64,417	0/0:22,0:22:6.72:0,7,120	0/0:15,0:15:39.76:0,40,563
chr10	98265614	.	AAC	A	346.50	PASS	AB=0.986;AC=14;AF=0.250;AN=56;BaseQRankSum=4.700;DP=595;FS=4.075;HRun=0;HaplotypeScore=91.7856;InbreedingCoeff=-0.0636;MQ=58.82;MQ0=4;MQRankSum=-2.052;QD=1.45;ReadPosRankSum=-2.164;VQSLOD=1.5474;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,1:18:51.79:52,0,166	0/0:12,0:12:30.01:0,30,288	0/1:18,0:4:6.65:21,0,7	0/0:24,0:7:12.81:0,13,120	0/0:40,0:40:73.32:0,73,1374	0/0:15,0:15:28.49:0,28,239	0/1:13,0:12:0.02:0,0,43	0/0:23,0:23:54.31:0,54,631	0/0:18,0:18:26.73:0,27,211	0/0:28,0:27:77.17:0,77,715	0/1:19,0:19:5.29:5,0,304	0/1:21,0:21:19.43:19,0,170	0/1:16,0:16:20.64:21,0,99	0/1:12,0:12:42.55:43,0,81	0/1:23,0:23:13.44:13,0,155	0/0:24,0:24:65.94:0,66,696	0/0:30,0:30:56.12:0,56,478	1/1:26,0:26:38.55:199,39,0	0/0:21,0:19:56.70:0,57,474	0/1:25,1:26:30.94:31,0,287	0/0:13,0:13:29.59:0,30,256	0/1:12,0:12:18.40:18,0,87	0/1:19,2:21:75.27:75,0,130	0/1:12,0:12:0.07:0,0,142	0/0:38,0:38:78.38:0,78,721	0/0:27,0:27:32.88:0,33,498	0/0:24,0:24:22:0,22,283	0/0:19,0:19:46.34:0,46,644
chr10	98266038	.	CCA	C	1280.17	PASS	AB=0.869;AC=15;AF=0.268;AN=56;BaseQRankSum=8.342;DP=412;FS=44.529;HRun=0;HaplotypeScore=66.7413;InbreedingCoeff=-0.3510;MQ=67.27;MQ0=1;MQRankSum=-1.199;QD=4.72;ReadPosRankSum=7.290;VQSLOD=0.1396;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,1:24:15.60:16,0,212	0/0:4,0:4:12.02:0,12,145	0/0:13,0:10:23.83:0,24,273	0/0:11,0:9:17.89:0,18,246	0/0:10,0:10:23.95:0,24,249	0/1:9,3:12:31.21:85,0,31	0/1:29,10:39:80.63:349,0,81	0/1:16,4:20:59.47:59,0,269	0/1:13,2:15:45.57:51,0,46	0/0:9,0:9:17.45:0,17,161	0/0:5,0:5:12.01:0,12,128	0/1:17,6:23:39.59:268,0,40	0/1:17,1:18:63.85:64,0,104	0/1:14,1:15:54.08:59,0,54	0/1:13,7:20:99:133,0,116	0/0:16,0:16:28.34:0,28,256	0/0:18,0:18:49.98:0,50,509	0/1:21,0:21:17.51:18,0,80	0/1:8,0:8:3.94:4,0,115	0/0:6,0:6:8.24:0,8,87	0/0:10,0:10:20.99:0,21,181	0/1:9,0:9:0.16:0,0,108	0/1:9,1:10:67.98:68,0,96	0/1:18,10:28:99:239,0,124	0/0:10,0:10:26.09:0,26,288	0/0:12,4:16:10.17:0,10,271	0/0:13,0:13:30.09:0,30,447	0/1:5,4:9:18.11:18,0,103
chr10	98267157	.	AG	A	1616.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.261;DP=818;FS=2.618;HRun=3;HaplotypeScore=79.3217;InbreedingCoeff=0.9959;MQ=76.02;MQ0=0;MQRankSum=-4.063;QD=28.86;ReadPosRankSum=2.488;VQSLOD=3.1898;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,53:56:99:1711,138,0	0/0:8,0:8:21.06:0,21,283	0/0:31,0:31:87.25:0,87,1157	0/0:25,0:25:57.84:0,58,910	0/0:46,0:46:99:0,135,1907	0/0:15,0:15:42.14:0,42,604	0/0:38,0:38:99:0,105,1475	0/0:41,0:41:99:0,117,1618	0/0:26,0:26:78.26:0,78,1118	0/0:24,0:24:72.21:0,72,1015	0/0:24,0:24:66.22:0,66,943	0/0:29,0:29:81.27:0,81,1167	0/0:37,0:37:99:0,108,1551	0/0:36,0:36:99:0,105,1505	0/0:37,0:37:99:0,111,1596	0/0:31,0:31:90.30:0,90,1295	0/0:32,0:32:96.32:0,96,1379	0/0:19,0:19:57.19:0,57,820	0/0:16,0:16:39.12:0,39,544	0/0:37,0:37:99:0,108,1536	0/0:38,0:38:99:0,114,1595	0/0:41,0:41:99:0,117,1679	0/0:29,0:29:87.28:0,87,1233	0/0:18,0:18:54.18:0,54,777	0/0:20,0:20:57.19:0,57,820	0/0:23,0:23:69.21:0,69,973	0/0:20,0:20:57.19:0,57,820	0/0:21,0:21:60.20:0,60,862
chr10	98268403	.	C	CT	781.94	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.260;DP=547;FS=0.694;HRun=10;HaplotypeScore=53.0807;InbreedingCoeff=0.7292;MQ=66.50;MQ0=1;MQRankSum=-0.232;QD=21.72;ReadPosRankSum=1.931;VQSLOD=4.5369;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:36:84.04:876,84,0	0/0:3,0:3:8.99:0,9,74	0/0:16,0:12:14.23:0,14,136	0/0:5,0:6:11.84:0,12,87	0/0:26,0:28:62.80:0,63,479	0/0:21,0:20:55.18:0,55,446	0/0:10,0:10:20.97:0,21,172	0/0:24,0:24:50.89:0,51,417	0/0:20,0:21:46.94:0,47,372	0/0:26,0:26:71.88:0,72,585	0/0:23,0:24:55.95:0,56,447	0/0:23,0:23:62.91:0,63,517	0/0:10,0:10:17.94:0,18,144	0/0:8,0:8:20.93:0,21,164	0/0:20,0:20:53.88:0,54,435	0/0:17,0:18:43.97:0,44,351	0/0:26,0:26:62.90:0,63,519	0/0:23,0:23:53.92:0,54,443	0/0:30,0:29:52.37:0,52,459	0/0:32,0:32:86.87:0,87,712	0/0:16,1:17:0.92:0,1,208	0/0:11,0:11:23.95:0,24,195	0/0:13,0:13:29.89:0,30,239	0/0:19,0:19:50.91:0,51,415	0/0:25,0:25:68.90:0,69,564	0/0:18,0:18:53.93:0,54,442	0/0:24,0:25:67.94:0,68,545	0/0:13,0:13:32.94:0,33,271
chr10	98270258	.	A	AC	4101.98	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-14.195;DP=713;FS=1.782;HRun=4;HaplotypeScore=94.1016;InbreedingCoeff=0.9944;MQ=86.93;MQ0=0;MQRankSum=-1.298;QD=33.62;ReadPosRankSum=-0.574;VQSLOD=3.5414;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,43:45:99:1592,117,0	0/0:6,0:6:18.05:0,18,204	0/0:23,0:23:54.14:0,54,598	0/0:32,0:31:64.51:0,65,735	0/0:12,0:12:33.09:0,33,371	0/0:20,0:20:60.16:0,60,673	0/0:16,0:16:39.11:0,39,441	1/1:3,28:31:81.18:1033,81,0	0/0:27,0:27:69.19:0,69,782	0/0:24,0:24:60.17:0,60,679	0/0:11,0:11:30.08:0,30,339	0/0:36,0:36:99:0,105,1190	0/0:29,0:29:81.19:0,81,891	0/0:20,0:20:60.16:0,60,672	0/0:41,0:41:99:0,114,1291	1/1:2,30:32:81.27:1108,81,0	0/0:41,0:41:99:0,111,1259	0/0:30,0:30:84.24:0,84,952	0/0:22,0:22:51.14:0,51,578	0/0:11,0:11:24.07:0,24,272	0/0:57,0:57:99:0,138,1553	0/0:17,0:17:39.11:0,39,442	0/0:6,0:6:18.05:0,18,201	0/0:36,0:36:99:0,102,1144	0/0:22,0:22:63.16:0,63,698	0/0:25,0:25:66.18:0,66,745	0/0:26,0:26:78.20:0,78,865	1/1:4,10:14:27.09:369,27,0
chr10	98271518	.	CA	C	1024.43	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=0.623;DP=192;FS=6.261;HRun=1;HaplotypeScore=35.1546;InbreedingCoeff=0.7239;MQ=83.40;MQ0=0;MQRankSum=-3.106;QD=9.57;ReadPosRankSum=-2.459;VQSLOD=0.0677;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:14.92:116,15,0	0/0:3,0:3:8.89:0,9,63	0/0:10,0:10:20.22:0,20,196	0/0:16,0:14:24.02:0,24,285	0/0:7,0:7:5.66:0,6,175	1/1:8,1:9:17.94:146,18,0	1/1:15,1:16:13.43:101,13,0	1/1:7,0:6:11.96:97,12,0	1/1:5,0:5:6.90:47,7,0	0/0:2,0:2:6.01:0,6,62	0/0:1,0:1:3.01:0,3,37	1/1:5,0:5:6.92:50,7,0	1/1:5,0:5:11.49:86,11,0	1/1:11,0:11:10.32:66,10,0	0/0:4,0:4:0.29:0,0,1	1/1:10,2:12:26.52:179,27,0	0/0:10,0:10:2.23:0,2,149	1/1:13,0:13:14.60:84,15,0	0/0:7,0:7:15.48:0,15,98	0/0:3,0:3:5.98:0,6,73	0/0:11,0:11:2.49:0,2,156	0/1:1,0:1:0:0,0,0	0/1:1,0:1:0:0,0,0	1/1:5,0:5:8.43:55,8,0	0/0:5,0:5:12.01:0,12,127	1/1:6,1:7:11.89:88,12,0	0/0:6,0:6:17.79:0,18,186	1/1:5,0:5:13.98:99,14,0
chr10	98272644	.	G	GCACACA	8591.05	PASS	AB=0.564;AC=23;AF=0.411;AN=56;BaseQRankSum=-6.001;DP=651;FS=1.495;HRun=0;HaplotypeScore=151.9919;InbreedingCoeff=0.8806;MQ=67.65;MQ0=1;MQRankSum=-11.348;QD=33.30;ReadPosRankSum=-1.590;VQSLOD=4.1782;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:31:12.86:13,0,125	0/0:12,0:12:36.12:0,36,733	0/0:37,0:26:24.15:0,24,360	0/0:35,0:25:18.04:0,18,307	0/0:17,0:19:33.10:0,33,596	1/1:7,11:20:27.09:832,27,0	1/1:12,10:26:36.12:976,36,0	0/0:19,0:21:26.74:0,27,402	1/1:5,13:20:30.10:991,30,0	0/0:25,0:28:61.44:0,61,1119	0/0:11,0:11:21.04:0,21,367	1/1:11,10:25:11.30:923,11,0	1/1:9,9:18:26.99:889,27,0	1/1:10,9:20:33.07:951,33,0	1/1:13,11:25:36.12:1129,36,0	0/0:23,0:24:51.16:0,51,1019	0/0:28,0:30:63.20:0,63,1234	0/0:10,0:40:28.64:0,29,168	0/0:16,0:16:36.02:0,36,626	0/0:13,0:13:24.08:0,24,495	0/0:58,0:63:99:0,129,2582	1/1:10,5:17:18.06:534,18,0	1/1:6,3:11:6.02:134,6,0	1/1:11,9:21:12.04:396,12,0	0/0:15,0:16:36.11:0,36,670	1/1:15,7:24:33.10:825,33,0	0/0:16,0:16:33.10:0,33,661	0/0:8,0:8:4.10:0,4,386
chr10	98275681	.	GTCGAAAGCTA	G	17140.31	PASS	AB=0.556;AC=21;AF=0.375;AN=56;BaseQRankSum=18.317;DP=710;FS=15.816;HRun=0;HaplotypeScore=233.4446;InbreedingCoeff=0.9223;MQ=87.47;MQ0=0;MQRankSum=-17.712;QD=69.96;ReadPosRankSum=1.999;VQSLOD=3.4296;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,6575	0/0:7,0:7:21.07:0,21,1116	0/0:29,0:29:78.25:0,78,3501	0/0:28,0:28:72.25:0,72,3331	0/0:23,0:23:69.24:0,69,3509	1/1:1,16:17:45.15:1473,45,0	1/1:3,20:24:54.19:1830,54,0	0/0:19,0:19:54.19:0,54,2679	0/1:4,16:20:99:1280,0,120	0/0:26,0:26:78.23:0,78,3773	0/0:12,0:12:36.12:0,36,1845	1/1:2,26:28:66.23:2236,66,0	1/1:3,20:23:48.16:1626,48,0	1/1:0,26:26:65.83:2236,66,0	1/1:2,26:28:66.23:2236,66,0	0/0:44,0:44:99:0,129,6222	0/0:45,0:45:99:0,135,7070	0/0:34,0:34:99:0,99,4937	0/0:22,0:22:63.21:0,63,2952	0/0:13,0:13:39.13:0,39,2076	0/0:46,0:46:99:0,135,6595	1/1:0,21:21:45.15:1524,45,0	1/1:1,15:16:20.06:619,20,0	1/1:1,23:24:29.51:919,30,0	0/0:36,0:36:99:0,108,5675	1/1:2,16:18:48.10:1162,48,0	0/0:21,0:21:60.21:0,60,2975	0/0:18,0:18:54.19:0,54,2901
chr10	98276239	.	TA	T	2463.84	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.097;DP=540;FS=15.523;HRun=5;HaplotypeScore=71.0989;InbreedingCoeff=0.9972;MQ=83.71;MQ0=4;MQRankSum=-0.911;QD=23.69;ReadPosRankSum=1.411;VQSLOD=2.0852;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:90.26:1016,90,0	0/0:9,0:9:27.07:0,27,330	0/0:36,0:23:28.07:0,28,342	0/0:51,0:31:21.97:0,22,440	0/0:19,0:19:48.14:0,48,620	0/0:11,0:11:33.08:0,33,408	0/0:22,0:22:60.20:0,60,794	1/1:5,21:26:63.13:675,63,0	0/0:15,0:15:42.11:0,42,511	0/0:17,0:17:51.14:0,51,623	0/0:12,0:12:32.98:0,33,361	0/0:10,0:10:30.08:0,30,372	0/0:11,0:11:33.10:0,33,425	0/0:11,0:11:27.09:0,27,358	0/0:17,0:17:42.10:0,42,503	1/1:2,14:16:24.07:271,24,0	0/0:30,0:30:72.19:0,72,919	1/1:3,16:19:33.09:372,33,0	0/0:18,0:18:33.73:0,34,470	0/0:26,0:26:75.15:0,75,889	0/0:21,0:21:57.19:0,57,756	0/0:11,0:11:30.07:0,30,368	0/0:15,0:15:36.06:0,36,414	0/0:13,0:12:33.09:0,33,410	0/0:18,0:18:51.13:0,51,632	0/0:23,0:23:66.20:0,66,843	0/0:19,0:19:57.14:0,57,696	1/1:0,10:10:27.08:304,27,0
chr10	98277111	.	G	GA	2111.47	PASS	AB=0.941;AC=33;AF=0.589;AN=56;BaseQRankSum=2.719;DP=588;FS=1.927;HRun=10;HaplotypeScore=68.6853;InbreedingCoeff=0.6670;MQ=56.03;MQ0=15;MQRankSum=-3.368;QD=5.40;ReadPosRankSum=0.731;VQSLOD=1.1383;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:34:28.39:200,28,0	0/0:10,0:10:26.95:0,27,221	0/1:25,0:9:3.48:3,0,71	0/0:16,0:5:3.64:0,4,53	0/1:21,2:22:3.56:4,0,379	1/1:5,0:22:5.68:28,6,0	1/1:4,0:18:6.04:45,6,0	1/1:7,26:35:31.64:699,32,0	1/1:3,0:16:6.10:27,6,0	0/0:14,0:14:6.97:0,7,263	0/0:23,1:24:24.87:0,25,394	1/1:5,0:15:11.24:57,11,0	1/1:2,0:13:8.81:53,9,0	1/1:1,0:17:11.21:57,11,0	1/1:7,0:30:19.89:99,20,0	1/1:6,23:28:38.55:582,39,0	0/0:34,0:34:80.89:0,81,665	1/1:3,0:14:10.50:55,11,0	0/0:18,1:16:6.87:0,7,255	0/0:11,0:11:26.95:0,27,219	0/0:18,0:19:46.88:0,47,364	1/1:5,1:22:8.64:57,9,0	1/1:2,0:9:2.67:30,3,0	1/1:4,0:18:8.18:36,8,0	0/0:20,1:21:56.29:0,56,447	0/1:25,0:28:22.02:22,0,126	0/0:28,0:27:77.89:0,78,637	1/1:1,10:11:24.06:256,24,0
chr10	98277633	.	G	GC	16625.17	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-15.883;DP=660;FS=10.904;HRun=1;HaplotypeScore=60.6966;InbreedingCoeff=0.9955;MQ=84.65;MQ0=0;MQRankSum=-3.148;QD=41.15;ReadPosRankSum=1.490;VQSLOD=4.8058;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,50:53:99:1978,132,0	0/0:13,0:13:39.13:0,39,506	0/0:26,0:25:56.61:0,57,752	0/0:22,0:21:50.96:0,51,596	0/0:12,0:12:33.11:0,33,429	1/1:1,16:17:45.15:675,45,0	1/1:1,28:29:69.23:1034,69,0	1/1:1,34:35:99:1483,99,0	1/1:1,36:37:99:1528,102,0	0/0:17,0:17:48.16:0,48,623	0/0:12,0:12:33.10:0,33,416	1/1:0,20:20:57.19:854,57,0	1/1:1,21:22:66.18:964,66,0	1/1:2,23:25:66.22:989,66,0	1/1:1,36:37:99:1619,108,0	1/1:0,30:30:90.30:1349,90,0	0/0:45,0:45:99:0,132,1713	1/1:0,19:19:51.17:764,51,0	0/0:17,0:17:48.14:0,48,608	0/0:20,0:20:57.19:0,57,740	0/0:25,0:25:75.23:0,75,959	1/1:0,11:11:27.09:403,27,0	1/1:0,16:16:48.16:720,48,0	1/1:0,34:34:96.33:1439,96,0	0/0:18,0:18:48.16:0,48,623	1/1:0,15:15:45.13:646,45,0	0/0:29,0:29:87.28:0,87,1129	1/1:0,4:4:12.04:179,12,0
chr10	98278258	.	A	AC	2073.57	PASS	AC=52;AF=1.000;AN=52;DP=288;FS=0.000;HRun=1;HaplotypeScore=356.6185;InbreedingCoeff=-0.0033;MQ=30.48;MQ0=2;QD=7.25;VQSLOD=0.4260;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,1:20:28.39:142,28,0	1/1:2,1:3:5.87:36,6,0	./.	./.	1/1:12,0:12:11.18:54,11,0	1/1:16,1:17:30.76:146,31,0	1/1:8,0:6:8.60:45,9,0	1/1:3,0:2:5.99:49,6,0	1/1:11,0:10:14.04:70,14,0	1/1:11,0:11:16.88:81,17,0	1/1:7,0:7:8.49:42,8,0	1/1:12,0:11:17.09:95,17,0	1/1:12,1:13:25.33:130,25,0	1/1:11,0:10:9.07:46,9,0	1/1:20,3:21:28.87:144,29,0	1/1:23,3:25:38.01:189,38,0	1/1:6,2:8:11.22:53,11,0	1/1:5,1:5:8.54:45,9,0	1/1:4,0:4:5.54:25,6,0	1/1:10,0:10:16.19:78,16,0	1/1:13,1:13:19.86:103,20,0	1/1:11,0:11:19.80:99,20,0	1/1:11,0:11:19.52:95,20,0	1/1:5,1:5:2.80:13,3,0	1/1:12,0:12:27.89:139,28,0	1/1:13,0:12:16.92:91,17,0	1/1:10,1:11:19.50:101,20,0	1/1:3,0:3:5.91:40,6,0
chr10	98288843	.	TC	T	9229.75	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=13.056;DP=671;FS=7.308;HRun=5;HaplotypeScore=70.9122;InbreedingCoeff=0.9960;MQ=78.86;MQ0=1;MQRankSum=-1.752;QD=29.97;ReadPosRankSum=4.396;VQSLOD=5.3892;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,1602	0/0:12,0:12:33.11:0,33,451	0/0:15,0:15:27:0,27,313	0/0:23,1:23:17.01:0,17,361	0/0:17,0:17:48.15:0,48,640	1/1:0,24:24:66.19:748,66,0	1/1:1,24:25:66.19:748,66,0	0/0:33,0:33:90.29:0,90,1215	1/1:0,28:28:84.24:951,84,0	0/0:27,0:27:78.21:0,78,1024	0/0:12,0:12:30.09:0,30,393	1/1:0,29:29:75.21:850,75,0	1/1:1,26:27:69.20:782,69,0	1/1:2,30:32:84.24:949,84,0	1/1:2,26:28:72.20:816,72,0	1/1:3,27:30:69.19:782,69,0	0/0:36,0:36:99:0,105,1418	0/0:25,0:25:66.21:0,66,886	0/0:18,0:18:45.13:0,45,585	0/0:15,0:15:42.13:0,42,557	0/0:40,0:40:99:0,117,1558	1/1:1,26:27:78.18:869,78,0	1/1:2,9:11:30.09:339,30,0	1/1:1,28:29:75.21:850,75,0	0/0:16,0:16:45.13:0,45,597	1/1:2,16:18:48.13:544,48,0	0/0:25,0:24:75.25:0,75,1023	0/0:5,0:5:15.05:0,15,205
chr10	98290583	.	TGAGAGAGAGAGAGAGAGAGAGAGA	T	7539.17	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=9.330;DP=621;FS=59.953;HRun=0;HaplotypeScore=346.4820;InbreedingCoeff=0.8768;MQ=73.09;MQ0=4;MQRankSum=-8.070;QD=31.41;ReadPosRankSum=3.229;VQSLOD=1.8800;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:45.15:0,45,3727	0/0:7,0:7:10.28:0,10,669	0/0:35,0:27:14.97:0,15,334	0/0:48,0:29:11.94:0,12,255	0/0:13,0:15:20.69:0,21,1369	1/1:21,1:24:6.01:355,6,0	1/1:13,5:18:12.04:751,12,0	0/0:26,0:26:29.77:0,30,1470	1/1:15,0:15:2.99:26,3,0	0/0:24,0:24:33.11:0,33,2196	0/0:11,0:12:21.07:0,21,1202	1/1:12,7:21:14.01:897,14,0	1/1:13,7:21:15.05:919,15,0	1/1:13,3:16:6.02:376,6,0	1/1:31,14:46:26.90:1670,27,0	0/0:21,0:31:45.06:0,45,3011	0/0:18,0:24:35.25:0,35,2557	0/0:16,0:19:42.10:0,42,2102	0/0:21,0:21:33.11:0,33,2122	0/0:18,0:18:21.96:0,22,1769	0/0:17,0:16:16.41:0,16,1485	1/1:18,6:25:12.04:731,12,0	1/1:16,8:26:16.62:1063,17,0	1/1:21,7:28:12.04:751,12,0	0/0:18,0:18:21.06:0,21,1477	0/0:17,0:17:42.14:0,42,3726	0/0:16,0:16:33.11:0,33,2334	0/0:7,0:7:3.01:0,3,115
chr10	98290905	.	A	AT	7304.15	PASS	AB=0.976;AC=22;AF=0.393;AN=56;BaseQRankSum=-13.068;DP=613;FS=2.726;HRun=7;HaplotypeScore=58.4354;InbreedingCoeff=0.8819;MQ=72.48;MQ0=0;MQRankSum=-0.092;QD=28.87;ReadPosRankSum=1.929;VQSLOD=5.6440;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.11:0,72,695	0/0:14,0:14:39.06:0,39,376	0/1:19,0:20:9.01:9,0,206	0/1:6,0:6:3.24:3,0,27	0/0:27,0:27:69.09:0,69,660	1/1:0,17:17:51.16:616,51,0	1/1:0,24:24:63.19:761,63,0	0/0:35,0:35:93.13:0,93,891	1/1:2,23:25:66.20:797,66,0	0/0:29,0:29:78.11:0,78,745	0/0:18,0:18:45.04:0,45,428	1/1:1,17:18:51.16:616,51,0	1/1:3,21:24:69.17:817,69,0	1/1:2,19:21:54.17:652,54,0	1/1:4,23:27:69.21:832,69,0	0/0:33,0:33:96.15:0,96,927	0/0:34,0:34:99:0,102,973	0/0:16,0:16:39.05:0,39,376	0/0:18,0:18:48.07:0,48,464	0/0:16,0:16:39.05:0,39,376	0/0:17,0:18:41.09:0,41,382	1/1:0,19:19:57.05:653,57,0	1/1:2,22:24:57.16:677,57,0	1/1:0,28:28:72.22:870,72,0	0/0:16,0:16:39.06:0,39,376	0/0:23,0:23:63.09:0,63,608	0/0:21,0:21:54.06:0,54,515	0/0:15,0:15:42.06:0,42,406
chr10	98291283	.	GCA	G	245.79	PASS	AB=0.970;AC=21;AF=0.438;AN=48;BaseQRankSum=3.001;DP=356;FS=8.985;HRun=0;HaplotypeScore=63.2362;InbreedingCoeff=-0.2644;MQ=59.90;MQ0=10;MQRankSum=-0.392;QD=0.90;ReadPosRankSum=-2.131;VQSLOD=-0.0778;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:26:10.69:11,0,98	0/1:11,0:11:15.41:15,0,36	./.	./.	0/1:18,0:16:0.83:1,0,143	0/1:15,0:15:0:0,0,0	./.	0/0:11,0:11:5.85:0,6,35	0/1:7,0:6:17.96:18,0,18	0/1:17,0:16:6.02:6,0,112	0/1:16,1:18:14.10:14,0,165	0/0:9,0:9:0:0,0,0	0/0:6,0:5:0:0,0,0	./.	0/1:4,0:4:0:0,0,0	1/1:6,0:6:2.90:16,3,0	0/1:25,6:32:49.94:50,0,200	0/1:22,0:21:4.18:4,0,157	0/1:11,0:11:29.52:30,0,113	0/0:5,0:5:9.34:0,9,65	0/1:27,5:27:8.94:9,0,182	0/0:8,0:8:2.94:0,3,18	1/1:9,0:9:2.98:21,3,0	0/0:8,0:8:0:0,0,0	0/1:10,1:11:17.97:18,0,110	0/1:17,0:16:24.65:88,0,25	0/1:12,0:12:45.19:45,0,53	1/1:3,0:3:2.97:20,3,0
chr10	98291313	.	ACACACACACACG	A	337.97	PASS	AB=0.934;AC=16;AF=0.286;AN=56;BaseQRankSum=-3.569;DP=422;FS=9.167;HRun=0;HaplotypeScore=112.5931;InbreedingCoeff=0.1137;MQ=53.53;MQ0=15;MQRankSum=1.293;QD=2.17;ReadPosRankSum=-4.294;VQSLOD=-0.5792;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:26:99:122,0,714	0/0:10,0:10:26.87:0,27,685	0/0:22,0:8:16.97:0,17,246	0/0:15,0:3:8.98:0,9,84	0/0:20,0:18:36.03:0,36,1211	1/1:17,0:17:0.47:1,0,0	0/0:8,9:15:6.02:0,6,86	0/1:15,0:15:95.23:95,0,483	0/1:6,1:6:27.86:28,0,260	0/0:16,0:14:42.08:0,42,1124	0/0:16,0:16:42.13:0,42,1671	0/1:10,0:10:9.96:10,0,114	1/1:8,0:8:2.94:18,3,0	1/1:2,0:1:3:25,3,0	1/1:10,0:10:2.83:17,3,0	0/0:7,0:7:5.93:0,6,83	0/0:32,0:32:66.10:0,66,2323	0/1:21,0:21:83.68:84,0,818	0/0:17,0:17:44.84:0,45,1340	0/0:5,0:5:13.29:0,13,555	0/0:46,0:41:49.97:0,50,1934	0/0:3,6:9:3.01:0,3,116	0/0:9,0:9:3:0,3,27	0/1:4,8:12:0:0,0,0	0/0:12,0:11:21.07:0,21,862	0/1:17,0:16:11.69:12,0,762	0/0:13,0:13:29.94:0,30,927	0/1:9,0:9:69.71:70,0,181
chr10	98291315	.	ACACACACACG	A	464.34	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=-2.898;DP=420;FS=6.938;HRun=0;HaplotypeScore=102.7093;InbreedingCoeff=0.0919;MQ=55.20;MQ0=15;MQRankSum=0.555;QD=3.27;ReadPosRankSum=-2.609;VQSLOD=0.1006;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:26:99:172,0,490	0/0:10,0:10:26.87:0,27,571	0/0:23,0:9:19.93:0,20,245	0/0:15,0:3:8.98:0,9,84	0/0:20,0:18:35.99:0,36,1061	1/1:16,1:17:0.47:1,0,0	0/0:17,0:15:5.98:0,6,47	0/1:15,0:15:98.76:99,0,308	0/1:7,0:6:27.86:28,0,177	0/0:16,0:14:42:0,42,914	0/0:16,0:16:42.12:0,42,1376	0/1:9,0:9:9.97:10,0,88	1/1:2,6:8:2.94:18,3,0	1/1:2,0:1:3:25,3,0	1/1:11,0:11:2.83:17,3,0	0/0:7,0:7:5.74:0,6,36	0/0:31,0:31:57.12:0,57,1873	0/1:20,0:20:99:136,0,596	0/0:19,0:19:49.96:0,50,1153	0/0:5,0:5:13.29:0,13,448	0/0:46,0:41:46.97:0,47,1635	0/0:9,0:9:3.01:0,3,88	0/0:8,0:8:2.94:0,3,18	./.	0/0:11,0:10:21.06:0,21,648	0/1:16,0:15:30.42:30,0,472	0/0:13,0:13:27.04:0,27,733	0/1:9,0:9:72.78:73,0,87
chr10	98291317	.	ACACACACG	A	761.25	PASS	AB=0.989;AC=15;AF=0.278;AN=54;BaseQRankSum=-1.914;DP=426;FS=8.514;HRun=0;HaplotypeScore=94.2147;InbreedingCoeff=0.0494;MQ=56.69;MQ0=15;MQRankSum=-0.451;QD=5.04;ReadPosRankSum=-0.710;VQSLOD=0.4188;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:26:99:213,0,303	0/0:11,0:11:29.87:0,30,477	0/0:23,0:9:19.93:0,20,216	0/0:16,0:4:11.94:0,12,102	0/0:19,0:17:33.02:0,33,860	0/1:17,0:17:0:0,0,0	0/0:17,0:15:2.99:0,3,24	0/1:16,0:16:99:151,0,165	0/1:8,0:7:42.86:43,0,107	0/0:17,0:15:41.87:0,42,730	0/0:17,0:17:39.11:0,39,1032	0/1:8,1:9:12.96:13,0,43	1/1:8,0:8:2.94:18,3,0	1/1:2,0:1:3:25,3,0	1/1:1,9:10:2.92:18,3,0	0/1:7,0:7:16.82:17,0,18	0/0:29,0:29:57.09:0,57,1442	0/1:20,0:20:99:184,0,387	0/0:20,0:20:52.19:0,52,950	0/0:5,0:5:12.91:0,13,354	0/0:46,0:41:49.93:0,50,1352	0/0:9,0:9:3.01:0,3,69	0/0:9,0:9:2.23:0,2,9	./.	0/0:11,0:10:20.83:0,21,536	0/1:17,0:16:99:104,0,198	0/0:14,0:14:29.96:0,30,578	0/1:9,0:9:22.62:122,0,23
chr10	98291319	.	ACACACG	A	1168.56	PASS	AB=1.000;AC=17;AF=0.327;AN=52;BaseQRankSum=-1.616;DP=429;FS=14.267;HRun=0;HaplotypeScore=84.1198;InbreedingCoeff=0.2522;MQ=57.16;MQ0=14;MQRankSum=1.497;QD=7.84;ReadPosRankSum=0.014;VQSLOD=0.9475;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:26:99:215,0,135	0/0:11,0:11:29.81:0,30,361	0/0:23,0:9:19.97:0,20,188	0/0:16,0:4:11.94:0,12,102	0/0:18,0:16:35.99:0,36,708	./.	./.	0/1:19,0:19:48.65:270,0,49	0/1:9,0:8:63.01:65,0,63	0/0:17,0:15:40.75:0,41,560	0/0:15,0:15:39.06:0,39,787	0/1:8,0:8:12.98:13,0,19	1/1:8,0:8:2.94:18,3,0	1/1:3,0:2:5.99:50,6,0	1/1:10,0:10:2.65:18,3,0	1/1:7,0:7:3:31,3,0	0/0:30,0:30:56.07:0,56,1084	0/1:20,0:20:99:234,0,200	0/0:20,0:20:48.77:0,49,725	0/0:6,0:6:15.50:0,15,301	0/0:49,0:44:55.86:0,56,1129	0/0:8,0:8:3.01:0,3,46	0/0:9,0:9:0.09:0,0,0	0/1:11,0:11:0:0,0,0	0/0:10,0:10:15.05:0,15,360	0/1:17,0:16:26.08:256,0,26	0/0:15,0:15:29.89:0,30,438	1/1:9,0:9:4.91:150,5,0
chr10	98291321	.	ACACG	A	1702.44	PASS	AB=1.000;AC=22;AF=0.423;AN=52;BaseQRankSum=-0.501;DP=424;FS=7.929;HRun=0;HaplotypeScore=71.5225;InbreedingCoeff=0.5535;MQ=59.04;MQ0=13;MQRankSum=-0.501;QD=10.77;ReadPosRankSum=1.117;VQSLOD=1.5157;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:26:24.33:283,0,24	0/0:11,0:11:23.84:0,24,251	0/0:24,0:10:22.84:0,23,207	0/0:16,0:4:11.94:0,12,102	0/0:18,0:17:38.96:0,39,547	./.	./.	1/1:21,0:21:17.85:406,18,0	0/1:9,0:8:7.26:74,0,7	0/0:18,0:16:36.82:0,37,413	0/0:16,0:16:30.09:0,30,504	1/1:8,0:8:2.95:19,3,0	1/1:7,1:8:2.94:18,3,0	1/1:3,0:2:5.99:50,6,0	1/1:10,0:10:2.94:18,3,0	1/1:0,6:6:2.78:58,3,0	0/0:31,0:31:32.57:0,33,783	0/1:20,0:20:19.85:277,0,20	0/0:19,0:19:47.81:0,48,497	0/0:6,0:6:14.96:0,15,215	0/0:49,0:44:52.79:0,53,870	0/0:8,0:8:2.94:0,3,18	1/1:8,0:8:2.16:8,2,0	0/1:11,0:11:0:0,0,0	0/0:8,0:8:17.96:0,18,252	1/1:17,0:16:18.76:488,19,0	0/0:13,0:13:32.58:0,33,355	1/1:9,0:9:22.19:178,22,0
chr10	98291323	.	ACG	A	1872.85	PASS	AB=1.000;AC=25;AF=0.500;AN=50;BaseQRankSum=0.992;DP=406;FS=1.119;HRun=0;HaplotypeScore=58.3779;InbreedingCoeff=0.7570;MQ=61.10;MQ0=12;MQRankSum=1.073;QD=11.85;ReadPosRankSum=0.554;VQSLOD=2.8298;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:23:38.62:392,39,0	0/0:9,0:9:21.71:0,22,184	0/0:25,0:11:24.82:0,25,224	0/0:16,0:4:11.94:0,12,102	0/0:18,0:17:33.98:0,34,315	0/1:15,0:15:0:0,0,0	./.	1/1:16,3:19:47.98:423,48,0	1/1:8,1:8:17.88:153,18,0	0/0:15,0:14:27.43:0,27,260	0/0:14,0:14:18.37:0,18,246	1/1:7,0:7:2.96:19,3,0	1/1:8,0:8:2.94:18,3,0	1/1:4,0:3:8.99:74,9,0	1/1:10,0:10:2.94:18,3,0	1/1:6,0:6:3:26,3,0	0/0:32,0:32:35.19:0,35,513	1/1:20,0:20:3.40:220,3,0	0/0:19,0:19:34.54:0,35,309	0/0:5,0:5:12.01:0,12,144	0/0:45,0:40:36.50:0,36,593	./.	1/1:2,6:8:2.59:37,3,0	./.	0/0:6,0:6:1.74:0,2,120	1/1:16,1:16:42.04:451,42,0	0/0:13,0:13:23.97:0,24,230	1/1:9,1:10:26.92:225,27,0
chr10	98293593	.	GGA	G	879.57	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=6.515;DP=457;FS=5.067;HRun=0;HaplotypeScore=55.5076;InbreedingCoeff=0.7543;MQ=70.67;MQ0=0;MQRankSum=0.450;QD=25.87;ReadPosRankSum=-3.131;VQSLOD=2.7838;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:66.23:0,66,1200	0/0:7,0:7:18.06:0,18,330	0/0:8,0:8:5.94:0,6,367	0/1:7,0:7:4.65:5,0,147	0/0:9,0:9:24.08:0,24,438	0/0:28,0:28:78.23:0,78,1361	0/0:31,0:31:93.32:0,93,1699	1/1:1,20:21:60.17:823,60,0	0/0:7,0:7:21.07:0,21,382	0/0:17,0:17:45.15:0,45,825	0/0:6,0:6:15.05:0,15,264	0/0:18,0:18:54.19:0,54,989	0/0:10,0:10:27.09:0,27,485	0/0:11,0:11:33.11:0,33,597	0/0:6,0:6:15.05:0,15,275	0/0:11,0:11:30.10:0,30,531	0/0:28,0:28:84.29:0,84,1529	0/0:28,0:28:78.23:0,78,1395	0/0:13,0:13:36.12:0,36,652	0/0:7,0:7:18.06:0,18,330	0/0:63,0:63:99:0,181,3219	0/0:9,0:9:27.09:0,27,494	0/0:10,0:10:27.09:0,27,491	0/0:23,0:23:63.22:0,63,1155	0/0:10,0:10:27.09:0,27,485	0/0:21,0:21:51.17:0,51,926	0/0:15,0:15:42.12:0,42,710	1/1:0,6:6:12.04:172,12,0
chr10	98293990	.	T	TG	2780.83	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-7.971;DP=364;FS=1.059;HRun=8;HaplotypeScore=39.0197;InbreedingCoeff=0.9195;MQ=80.99;MQ0=0;MQRankSum=-0.004;QD=20.15;ReadPosRankSum=-0.160;VQSLOD=2.9031;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:30:42.41:0,42,619	0/0:6,0:6:14.93:0,15,126	0/0:9,0:9:20.66:0,21,169	0/0:11,0:10:14.72:0,15,115	0/0:3,0:3:9:0,9,82	1/1:5,11:16:27.08:312,27,0	1/1:5,14:19:36.11:415,36,0	1/1:10,12:22:28.70:344,29,0	1/1:2,5:7:20.91:211,21,0	0/0:6,0:6:14.94:0,15,125	0/0:7,0:7:12:0,12,110	1/1:3,12:15:30.09:346,30,0	1/1:1,9:10:24.07:277,24,0	1/1:1,12:14:32.93:361,33,0	1/1:0,4:4:12.04:138,12,0	0/0:17,0:17:48.02:0,48,439	0/0:35,0:36:98.08:0,98,884	0/0:16,0:16:35.97:0,36,322	0/0:11,0:11:30:0,30,268	0/0:7,0:7:21.01:0,21,192	0/0:32,0:32:78.02:0,78,713	1/1:2,8:10:12.03:138,12,0	1/1:0,4:4:9.03:104,9,0	1/1:3,12:15:2.65:284,3,0	0/0:11,0:11:29.04:0,29,253	0/0:9,0:9:18:0,18,165	0/0:14,0:15:44.06:0,44,390	1/1:0,2:2:6.02:69,6,0
chr10	98294211	.	C	CT	1825.28	PASS	AB=1.000;AC=5;AF=0.096;AN=52;BaseQRankSum=-7.672;DP=276;FS=11.703;HRun=1;HaplotypeScore=28.3221;InbreedingCoeff=0.5546;MQ=81.60;MQ0=0;MQRankSum=0.019;QD=32.59;ReadPosRankSum=2.032;VQSLOD=1.6662;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:60.20:899,60,0	./.	0/1:9,0:9:19.15:19,0,222	0/0:7,0:7:11.97:0,12,135	0/0:1,0:1:3.01:0,3,39	0/0:11,0:11:33.11:0,33,428	0/0:8,0:8:24.04:0,24,293	0/0:14,0:14:42.13:0,42,532	0/0:3,0:3:9.03:0,9,117	0/0:5,0:5:15.05:0,15,194	0/0:3,0:3:9.03:0,9,117	0/0:11,0:11:32.90:0,33,402	0/0:6,0:6:15.05:0,15,194	0/0:9,0:9:27.09:0,27,350	0/0:13,0:13:33.11:0,33,428	0/0:4,0:4:9.03:0,9,117	0/0:19,0:19:54.18:0,54,701	1/1:0,25:25:69.23:1033,69,0	0/0:12,0:12:30.09:0,30,377	0/0:2,0:2:6.02:0,6,78	0/0:45,0:45:99:0,123,1552	0/0:1,0:1:3.01:0,3,39	./.	0/0:27,0:27:75.22:0,75,945	0/0:4,0:4:12.04:0,12,156	0/0:8,0:8:24.08:0,24,312	0/0:4,0:4:12.04:0,12,155	0/0:3,0:3:9.03:0,9,117
chr10	98294497	.	G	GA	6401.82	PASS	AB=0.653;AC=30;AF=0.536;AN=56;BaseQRankSum=1.839;DP=554;FS=2.705;HRun=10;HaplotypeScore=81.6531;InbreedingCoeff=0.6979;MQ=75.54;MQ0=1;MQRankSum=0.411;QD=18.66;ReadPosRankSum=1.515;VQSLOD=5.7080;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,29:34:4.67:662,5,0	0/0:1,0:1:3:0,3,25	0/0:36,0:23:14.92:0,15,173	0/0:35,0:26:14.01:0,14,92	0/0:15,0:16:43.99:0,44,350	1/1:4,17:22:23.43:442,23,0	1/1:3,14:17:11.41:315,11,0	1/1:4,2:24:53.53:347,54,0	1/1:2,15:18:17.29:373,17,0	0/1:12,1:13:2.03:2,0,190	0/0:9,0:10:25.69:0,26,190	1/1:4,22:27:10.56:491,11,0	1/1:0,17:17:39.10:416,39,0	1/1:2,8:10:21.05:224,21,0	0/1:6,16:21:4.15:370,0,4	1/1:1,24:25:41.55:646,42,0	0/0:34,0:34:83.87:0,84,689	0/1:6,22:28:19.75:413,0,20	0/0:25,0:25:67.63:0,68,534	0/0:7,0:7:11.97:0,12,99	0/0:20,1:21:19:0,19,345	0/1:1,5:6:9.58:113,0,10	1/1:0,10:10:23.82:256,24,0	1/1:4,26:30:16.81:568,17,0	0/0:4,0:5:13.98:0,14,99	1/1:7,22:29:63.10:650,63,0	0/0:17,0:18:40.95:0,41,326	1/1:1,0:11:22.76:114,23,0
chr10	98295400	.	TC	T	3403.02	PASS	AB=0.756;AC=45;AF=0.804;AN=56;BaseQRankSum=-1.968;DP=422;FS=15.256;HRun=12;HaplotypeScore=76.2997;InbreedingCoeff=0.1409;MQ=78.34;MQ0=3;MQRankSum=-2.736;QD=8.66;ReadPosRankSum=1.957;VQSLOD=1.0054;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:19,3:23:42.99:43,0,124	1/1:2,2:4:5.97:46,6,0	0/0:19,0:13:12.62:0,13,105	0/1:21,0:15:15.14:21,0,15	1/1:5,2:7:5.96:46,6,0	0/1:5,4:11:11.44:86,0,11	1/1:13,8:25:39.99:261,40,0	1/1:17,6:25:19.89:141,20,0	1/1:3,8:11:23.85:184,24,0	1/1:11,3:15:12.49:79,12,0	1/1:4,4:9:8:52,8,0	1/1:5,5:13:27.02:180,27,0	1/1:5,7:13:16.85:102,17,0	1/1:5,6:12:19.93:145,20,0	1/1:4,7:11:17.89:139,18,0	0/1:8,4:12:25.42:25,0,113	1/1:4,31:36:79.72:609,80,0	0/1:20,3:23:68.89:69,0,191	1/1:8,6:14:14.88:114,15,0	0/1:1,6:8:7.81:82,0,8	1/1:17,9:31:29.76:174,30,0	0/1:4,6:10:10.60:76,0,11	1/1:4,1:5:8.94:67,9,0	1/1:4,16:23:47.94:342,48,0	1/1:7,0:9:7:35,7,0	0/0:3,0:10:14.60:0,15,92	1/1:2,14:17:34.89:261,35,0	1/1:4,1:5:2.96:23,3,0
chr10	98296189	.	GCC	G	3924.89	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-0.829;DP=416;FS=10.244;HRun=11;HaplotypeScore=95.8826;InbreedingCoeff=0.9339;MQ=72.22;MQ0=1;MQRankSum=-5.209;QD=22.69;ReadPosRankSum=2.711;VQSLOD=2.4065;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:41.60:0,42,447	0/0:4,0:4:9.02:0,9,118	0/0:12,0:12:17.21:0,17,210	0/0:13,0:12:11.39:0,11,159	0/0:8,0:8:20.65:0,21,221	1/1:7,16:23:47.65:479,48,0	1/1:5,15:20:42.09:447,42,0	0/0:13,0:20:15.63:0,16,54	1/1:0,14:14:39.10:415,39,0	0/0:6,0:8:14.53:0,15,176	0/0:7,0:7:9.01:0,9,99	1/1:8,17:25:57.10:598,57,0	1/1:2,12:14:30.02:319,30,0	1/1:8,9:17:30.03:304,30,0	1/1:4,15:19:45.09:471,45,0	0/0:26,0:26:71.97:0,72,653	0/0:17,0:19:47.59:0,48,612	0/0:28,0:29:78.22:0,78,1100	0/0:13,0:14:20.53:0,21,243	0/0:4,0:4:6.01:0,6,71	0/0:14,0:14:26.52:0,27,290	1/1:1,12:13:33.08:351,33,0	1/1:3,8:11:24.04:255,24,0	1/1:7,10:17:27.03:287,27,0	0/0:8,0:8:12:0,12,105	0/0:18,0:18:33.02:0,33,366	0/0:12,0:13:23.57:0,24,322	0/0:2,0:2:5.97:0,6,46
chr10	98297671	.	C	CCG	327.43	PASS	AB=0.700;AC=25;AF=0.500;AN=50;BaseQRankSum=0.677;DP=176;FS=6.009;HRun=0;HaplotypeScore=51.5884;InbreedingCoeff=0.4903;MQ=87.03;MQ0=0;MQRankSum=-0.616;QD=3.56;ReadPosRankSum=-1.081;VQSLOD=0.8808;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:2.90:16,3,0	0/0:3,0:3:3:0,3,27	0/0:12,0:11:20.23:0,20,139	0/1:6,0:6:7.79:8,0,13	0/0:6,0:6:9.91:0,10,98	0/1:2,1:5:0.08:0,0,0	1/1:6,0:7:8.95:86,9,0	1/1:1,8:10:11.93:90,12,0	0/1:4,5:10:0:0,0,0	0/0:8,0:8:6:0,6,56	./.	1/1:7,0:7:6.01:63,6,0	1/1:4,0:4:3:25,3,0	1/1:5,0:8:3.01:35,3,0	1/1:2,0:2:3:25,3,0	1/1:1,0:8:8.77:52,9,0	0/0:8,0:8:6.44:0,6,47	./.	0/0:5,0:5:8.51:0,9,74	0/0:5,0:5:5.98:0,6,48	0/0:13,0:13:5.90:0,6,51	0/1:2,0:5:0:0,0,0	1/1:6,0:6:5.99:49,6,0	0/1:2,1:3:0:0,0,0	0/0:6,0:6:2.97:0,3,20	1/1:3,1:4:2.99:27,3,0	0/0:9,0:9:7.53:0,8,52	./.
chr10	98299387	.	G	GCACA	3992.63	PASS	AB=0.645;AC=17;AF=0.304;AN=56;BaseQRankSum=-6.887;DP=640;FS=4.043;HRun=0;HaplotypeScore=140.5182;InbreedingCoeff=0.4589;MQ=64.58;MQ0=10;MQRankSum=1.269;QD=15.54;ReadPosRankSum=-0.706;VQSLOD=2.7981;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:36:22.14:0,22,154	0/0:9,0:11:12.03:0,12,171	0/0:20,0:14:3.01:0,3,42	0/0:20,0:14:2.59:0,3,38	0/0:16,0:20:30.07:0,30,397	0/1:12,11:28:6.18:300,0,6	0/1:16,16:40:45.16:643,0,45	0/0:15,0:18:9.07:0,9,65	0/1:10,7:20:77.80:200,0,78	0/0:24,0:24:21.06:0,21,331	0/0:7,0:8:5.68:0,6,53	0/1:13,8:23:23.68:418,0,24	0/1:5,8:15:26.21:348,0,26	1/1:2,12:17:32.58:668,33,0	1/1:11,14:27:24.08:572,24,0	1/1:16,0:21:12.04:209,12,0	0/0:31,0:35:47.55:0,48,831	0/0:12,0:24:30.66:0,31,262	0/0:15,0:15:7.24:0,7,118	0/0:14,0:15:18.05:0,18,265	0/0:23,0:28:36.09:0,36,491	1/1:13,5:22:3.28:73,3,0	1/1:6,1:14:8.55:96,9,0	1/1:15,9:29:26.30:466,26,0	0/0:27,0:30:30.24:0,30,391	0/0:25,0:28:20.20:0,20,541	0/0:25,0:27:33.03:0,33,581	0/0:7,0:15:15.02:0,15,140
chr10	98302465	.	GCCA	G	9221.03	PASS	AB=0.529;AC=19;AF=0.339;AN=56;BaseQRankSum=12.836;DP=622;FS=2.810;HRun=0;HaplotypeScore=97.0656;InbreedingCoeff=0.8985;MQ=82.43;MQ0=0;MQRankSum=-3.721;QD=41.17;ReadPosRankSum=8.905;VQSLOD=5.0824;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,2250	0/0:8,0:8:21.07:0,21,452	0/0:22,0:21:58.68:0,59,1215	0/0:18,0:18:6.40:0,6,896	0/0:14,0:14:39.13:0,39,906	1/1:0,20:20:45.15:794,45,0	1/1:0,33:33:90.31:1588,90,0	0/0:20,0:20:57.20:0,57,1317	0/1:2,16:18:31.82:596,0,32	0/0:25,0:25:75.25:0,75,1733	0/0:5,0:5:15.05:0,15,354	1/1:0,31:31:78.27:1376,78,0	1/1:0,29:29:72.25:1270,72,0	1/1:1,21:22:48.16:847,48,0	1/1:0,25:25:60.21:1058,60,0	0/0:26,1:27:75.26:0,75,1774	0/0:41,0:41:99:0,123,2875	0/0:32,1:33:47.48:0,47,2172	0/0:18,0:18:54.10:0,54,1143	0/0:16,0:16:48.16:0,48,1135	0/0:51,0:51:99:0,147,3357	1/1:0,16:16:35.54:634,36,0	1/1:0,8:8:12.47:213,12,0	1/1:0,22:22:48.16:846,48,0	0/0:13,0:13:39.13:0,39,897	0/0:23,0:23:69.24:0,69,1630	0/0:18,0:17:51.18:0,51,1191	0/0:10,0:10:27.09:0,27,638
chr10	98302582	.	AGGG	A	7943.01	PASS	AB=0.808;AC=28;AF=0.500;AN=56;BaseQRankSum=3.253;DP=567;FS=23.619;HRun=12;HaplotypeScore=101.3856;InbreedingCoeff=0.8312;MQ=70.57;MQ0=0;MQRankSum=-3.123;QD=23.23;ReadPosRankSum=7.628;VQSLOD=1.4020;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:28:54.72:679,55,0	0/0:2,0:4:9.01:0,9,125	0/0:26,0:20:46.30:0,46,595	0/0:16,1:10:14.86:0,15,155	0/0:10,0:10:12.04:0,12,204	1/1:2,10:12:30.04:361,30,0	1/1:10,22:32:57.07:720,57,0	0/1:8,0:13:4.41:4,0,9	1/1:3,22:25:66.20:834,66,0	0/0:13,0:14:6.49:0,6,118	0/0:6,0:6:6.02:0,6,118	1/1:4,18:23:45.02:528,45,0	1/1:4,18:22:57.17:718,57,0	1/1:6,17:25:54.02:642,54,0	1/1:3,19:22:49.97:642,50,0	0/1:22,1:25:7.36:7,0,437	0/0:28,0:36:75.17:0,75,1273	1/1:4,21:26:62.96:721,63,0	0/0:13,0:13:18.04:0,18,279	0/0:12,0:12:21.03:0,21,343	0/0:51,0:51:51.58:0,52,796	1/1:6,9:15:26.91:312,27,0	1/1:2,7:9:21.04:263,21,0	1/1:12,24:36:60.58:759,61,0	0/0:14,0:14:24.93:0,25,372	1/1:9,20:29:60.13:752,60,0	0/0:14,0:18:21.03:0,21,314	0/0:0,0:2:5.62:0,6,29
chr10	98302592	.	GGGT	G	2966.12	PASS	AB=0.974;AC=18;AF=0.321;AN=56;BaseQRankSum=12.531;DP=534;FS=9.018;HRun=0;HaplotypeScore=111.9177;InbreedingCoeff=0.2960;MQ=72.26;MQ0=0;MQRankSum=-2.573;QD=9.72;ReadPosRankSum=12.213;VQSLOD=0.5736;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:34,1:35:99:271,0,133	0/0:4,0:4:12:0,12,169	0/0:27,0:19:50.80:0,51,653	0/0:18,0:11:23.61:0,24,187	0/0:5,0:5:14.98:0,15,248	1/1:11,0:11:4.10:104,4,0	0/1:30,0:30:92.86:242,0,93	0/0:17,0:17:47.92:0,48,413	0/1:26,1:27:0.70:340,0,1	0/0:9,0:9:21.52:0,22,289	0/0:6,0:6:9.02:0,9,160	1/1:22,2:24:1.86:214,2,0	0/1:23,2:25:8.96:344,0,9	0/1:23,1:24:12:232,0,12	0/1:22,0:22:14.58:233,0,15	0/0:14,0:14:24.38:0,24,576	0/0:34,0:34:93.19:0,93,1620	0/1:33,0:33:99:221,0,147	0/0:12,0:12:27.03:0,27,375	0/0:7,0:7:18.02:0,18,352	0/0:39,0:39:78.29:0,78,1102	1/1:10,2:12:4.04:180,4,0	1/1:7,0:7:20.38:121,20,0	0/1:31,1:32:54.18:297,0,54	0/0:13,0:13:27.95:0,28,434	1/1:21,2:23:33.22:342,33,0	0/0:20,0:20:41.54:0,42,551	0/0:4,0:4:12:0,12,109
chr10	98304810	.	C	CTG	18153.75	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-18.720;DP=713;FS=3.835;HRun=0;HaplotypeScore=82.7674;InbreedingCoeff=0.9945;MQ=71.37;MQ0=4;MQRankSum=-3.086;QD=44.28;ReadPosRankSum=3.950;VQSLOD=6.6204;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,50:51:99:2413,132,0	0/0:4,0:4:12.04:0,12,172	0/0:24,0:24:59.50:0,59,798	0/0:30,0:30:83.96:0,84,1092	0/0:23,0:23:63.19:0,63,878	1/1:4,21:25:51.17:935,51,0	1/1:1,27:28:72.25:1319,72,0	1/1:4,19:24:57.18:1011,57,0	1/1:3,20:22:51.17:934,51,0	0/0:35,0:35:93.26:0,93,1251	0/0:13,0:13:36.12:0,36,516	1/1:0,24:24:52.06:935,52,0	1/1:1,22:23:60.04:1098,60,0	1/1:2,23:25:66.23:1208,66,0	1/1:1,30:31:78.27:1429,78,0	1/1:1,26:27:63.22:1155,63,0	0/0:34,0:34:99:0,102,1423	1/1:0,25:25:60.21:1098,60,0	0/0:28,0:28:78.21:0,78,1035	0/0:25,0:25:69.22:0,69,969	0/0:39,0:39:99:0,114,1616	1/1:0,15:14:39.13:696,39,0	1/1:4,13:17:33.03:604,33,0	1/1:2,22:23:54.18:971,54,0	0/0:15,0:15:45.15:0,45,644	1/1:4,37:41:92.45:2016,92,0	0/0:33,0:33:93.31:0,93,1327	1/1:0,6:6:18.06:330,18,0
chr10	98306521	.	AGT	A	6250.93	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=12.202;DP=616;FS=4.102;HRun=0;HaplotypeScore=76.0208;InbreedingCoeff=0.9989;MQ=87.18;MQ0=2;MQRankSum=-3.446;QD=30.64;ReadPosRankSum=5.094;VQSLOD=6.2073;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,2304	0/0:8,0:8:24.07:0,24,362	0/0:23,0:23:60.20:0,60,982	0/0:25,0:25:56.92:0,57,868	0/0:23,0:23:63.22:0,63,1099	1/1:3,20:22:42.14:568,42,0	1/1:4,28:32:78.26:1055,78,0	0/0:22,0:22:63.22:0,63,1091	1/1:6,16:22:45.15:609,45,0	0/0:21,0:21:57.20:0,57,998	0/0:13,0:13:36.11:0,36,599	1/1:2,18:19:48.16:649,48,0	1/1:0,9:9:24.08:325,24,0	1/1:1,16:17:45.15:609,45,0	1/1:4,21:25:48.16:649,48,0	0/0:22,0:22:60.19:0,60,1023	0/0:41,0:41:99:0,117,2020	0/0:19,0:19:54.18:0,54,937	0/0:14,0:14:42.13:0,42,689	0/0:15,0:15:45.15:0,45,781	0/0:47,0:47:99:0,138,2380	1/1:0,15:15:39.13:528,39,0	1/1:1,13:14:36.12:487,36,0	1/1:2,25:27:57.19:771,57,0	0/0:9,0:9:24.08:0,24,421	0/0:28,0:28:81.26:0,81,1392	0/0:26,0:26:69.24:0,69,1208	0/0:12,0:12:30.10:0,30,504
chr10	98306782	.	G	GGTGT	2975.86	PASS	AB=0.764;AC=26;AF=0.542;AN=48;BaseQRankSum=-1.271;DP=497;FS=5.617;HRun=0;HaplotypeScore=108.0599;InbreedingCoeff=0.4220;MQ=63.82;MQ0=8;MQRankSum=-2.941;QD=9.82;ReadPosRankSum=2.241;VQSLOD=2.4592;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:5.96:44,6,0	0/0:5,0:5:9.02:0,9,119	./.	./.	0/0:9,0:9:9.03:0,9,135	1/1:14,6:24:5.61:81,6,0	0/1:32,12:45:46.20:399,0,46	./.	1/1:7,6:13:6.02:131,6,0	0/0:15,0:15:13.82:0,14,146	0/0:7,0:7:2.67:0,3,27	1/1:12,6:17:8.85:208,9,0	1/1:2,0:7:2.64:13,3,0	0/1:6,4:15:34.66:199,0,35	0/1:7,5:15:33.42:92,0,33	1/1:12,0:12:12.03:171,12,0	1/1:12,8:22:18.06:424,18,0	1/1:19,0:18:12.92:158,13,0	0/0:16,0:16:9.02:0,9,118	0/0:5,0:4:3.01:0,3,47	0/0:57,0:57:77.77:0,78,868	1/1:10,0:10:6.01:74,6,0	./.	1/1:31,3:37:44.51:625,45,0	0/0:8,0:8:2.97:0,3,25	1/1:23,0:22:43.64:517,44,0	0/1:11,0:12:5.06:5,0,197	0/0:1,0:3:3:0,3,28
chr10	98306791	.	G	GTGTGTGTG	2521.70	PASS	AB=1.000;AC=24;AF=0.500;AN=48;BaseQRankSum=1.380;DP=514;FS=6.699;HRun=0;HaplotypeScore=124.1544;InbreedingCoeff=0.4156;MQ=55.34;MQ0=16;MQRankSum=-1.557;QD=8.30;ReadPosRankSum=1.861;VQSLOD=1.8041;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,5:32:5.73:44,6,0	0/0:6,0:6:9.02:0,9,145	./.	./.	0/0:12,0:13:9.50:0,9,174	1/1:25,0:24:3:26,3,0	0/1:46,0:45:99:173,0,115	./.	1/1:16,0:15:6.49:82,6,0	0/0:14,0:13:12.66:0,13,184	0/0:8,0:8:2.98:0,3,22	1/1:19,0:17:10.03:110,10,0	0/0:9,0:9:2.10:0,2,9	0/1:15,0:15:37.31:60,0,37	0/1:14,0:14:33.06:33,0,52	1/1:9,0:9:10.74:336,11,0	1/1:21,0:21:17.98:152,18,0	1/1:19,0:18:14.99:329,15,0	0/0:13,0:12:9.03:0,9,160	0/0:6,0:5:3.01:0,3,75	0/0:62,0:59:79.48:0,79,1329	1/1:12,0:12:6.01:74,6,0	./.	1/1:37,0:37:13.18:381,13,0	0/0:6,0:6:2.99:0,3,25	1/1:26,0:25:46.80:883,47,0	0/1:13,0:13:4.89:5,0,333	0/0:3,0:3:3.01:0,3,56
chr10	98308289	.	TACACACACACAC	T	570.11	PASS	AB=0.906;AC=11;AF=0.204;AN=54;BaseQRankSum=3.470;DP=487;FS=7.332;HRun=0;HaplotypeScore=173.4377;InbreedingCoeff=0.2108;MQ=68.79;MQ0=15;MQRankSum=-2.598;QD=4.83;ReadPosRankSum=1.055;VQSLOD=1.7962;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,1:25:32.35:81,0,32	0/0:6,0:6:15.05:0,15,817	./.	0/0:28,0:22:3.48:0,3,84	0/0:13,0:13:21.07:0,21,1151	1/1:14,0:14:2.60:10,3,0	0/0:21,0:21:36.11:0,36,1188	1/1:13,0:11:0.47:1,0,0	0/0:16,0:16:15.52:0,16,338	0/0:15,0:15:25.33:0,25,1255	0/0:14,0:13:14.64:0,15,584	0/0:14,0:14:7.84:0,8,102	0/0:6,0:7:6.02:0,6,109	0/0:19,0:19:26.75:0,27,296	0/0:19,0:18:11.63:0,12,251	0/1:10,0:12:33.63:100,0,34	0/0:45,0:46:78.27:0,78,3694	1/1:10,3:12:11.71:322,12,0	0/0:15,0:15:12.01:0,12,295	0/0:13,0:13:20.66:0,21,1018	0/0:24,0:24:24.08:0,24,1123	0/0:17,0:17:14.94:0,15,165	0/1:13,0:13:19.23:19,0,105	0/0:21,0:22:14.97:0,15,215	0/0:12,0:12:21.05:0,21,1044	0/1:21,0:20:76.04:76,0,221	0/0:15,0:17:21.06:0,21,882	0/1:2,0:3:34.38:96,0,34
chr10	98308324	.	A	ACTCTCTCTCT	1621.84	PASS	AB=0.956;AC=17;AF=0.304;AN=56;BaseQRankSum=7.458;DP=544;FS=6.633;HRun=0;HaplotypeScore=156.6859;InbreedingCoeff=0.0685;MQ=46.17;MQ0=26;MQRankSum=-3.800;QD=7.34;ReadPosRankSum=-0.971;VQSLOD=1.9020;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,2:19:8.22:58,8,0	0/0:9,0:9:24.08:0,24,780	0/0:31,0:6:14.96:0,15,327	0/0:34,0:12:29.91:0,30,573	0/0:17,0:17:33.11:0,33,1065	1/1:16,0:16:5.01:54,5,0	0/1:17,0:16:99:162,0,634	0/0:16,0:13:23.28:0,23,291	0/1:10,1:10:65.50:156,0,65	0/0:28,0:28:80.38:0,80,2505	0/0:13,0:11:18.05:0,18,531	0/1:16,0:16:18.34:18,0,30	0/1:8,3:12:46.06:124,0,46	0/1:13,0:12:52.75:142,0,53	0/1:28,0:26:15.12:138,0,15	1/1:18,0:15:4.62:149,5,0	0/0:53,0:52:99:0,141,4391	0/0:10,0:10:27.08:0,27,316	0/0:16,0:13:36.12:0,36,1110	0/0:16,0:16:42.13:0,42,1329	0/0:37,0:36:75.26:0,75,2265	0/1:12,1:12:2.45:42,0,2	0/1:13,0:13:5.36:24,0,5	0/1:19,0:19:22.71:240,0,23	0/0:19,0:19:39.12:0,39,1215	0/1:16,0:15:99:320,0,298	0/0:24,0:24:57.20:0,57,1776	0/1:5,0:4:26.86:163,0,27
chr10	98308326	.	A	ACTCTCTCTCTCT	2686.29	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=6.949;DP=550;FS=2.705;HRun=0;HaplotypeScore=172.8611;InbreedingCoeff=0.6728;MQ=47.59;MQ0=24;MQRankSum=-2.766;QD=12.49;ReadPosRankSum=-2.404;VQSLOD=2.2800;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:19:8.01:58,8,0	0/0:9,0:9:24.08:0,24,854	0/0:32,0:6:11.73:0,12,353	0/0:33,0:12:22.68:0,23,675	0/0:18,0:18:33.11:0,33,1109	1/1:16,0:16:2.84:25,3,0	0/1:18,0:17:99:189,0,350	0/0:17,0:14:8.67:0,9,113	1/1:11,0:10:12.71:311,13,0	0/0:27,0:27:78.26:0,78,2731	0/0:16,0:14:23.89:0,24,646	1/1:17,0:16:8.83:86,9,0	1/1:12,0:11:6.88:190,7,0	1/1:13,0:12:14.98:302,15,0	1/1:8,11:24:5.86:229,6,0	1/1:18,0:15:8.96:210,9,0	0/0:54,0:53:99:0,142,4686	0/0:13,0:13:26.40:0,26,358	0/0:16,0:13:36.11:0,36,1181	0/0:18,0:18:44.99:0,45,1428	0/0:38,0:37:84.14:0,84,2527	1/1:13,0:12:15.04:248,15,0	1/1:12,0:12:5.76:47,6,0	1/1:17,0:17:14.27:451,14,0	0/0:19,0:19:39.13:0,39,1371	0/1:16,0:15:99:386,0,319	0/0:25,0:25:63.18:0,63,2115	0/1:5,0:4:7.30:157,0,7
chr10	98308328	.	A	ACTCTCTCTCTCTCT	2928.50	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=8.224;DP=553;FS=0.539;HRun=0;HaplotypeScore=187.7179;InbreedingCoeff=0.6527;MQ=49.01;MQ0=23;MQRankSum=-5.120;QD=12.10;ReadPosRankSum=-2.733;VQSLOD=1.9472;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:19:8.59:97,9,0	0/0:9,0:9:24.08:0,24,818	0/0:35,0:7:9.92:0,10,341	0/0:36,0:14:23.86:0,24,851	0/0:19,0:19:38.74:0,39,1112	1/1:6,7:17:1.35:4,1,0	0/1:18,0:17:66.90:322,0,67	1/1:17,0:15:7.80:42,8,0	1/1:11,0:10:17.88:315,18,0	0/0:28,0:28:81.23:0,81,2716	0/0:15,0:13:26.86:0,27,754	1/1:15,0:14:5.50:70,6,0	1/1:12,0:11:9.20:233,9,0	1/1:13,0:12:15.05:319,15,0	1/1:21,0:19:5.01:226,5,0	1/1:19,0:16:9.03:271,9,0	0/0:54,0:53:99:0,138,4703	0/1:13,0:13:7.03:7,0,371	0/0:17,0:14:39.12:0,39,1286	0/0:18,0:18:48.07:0,48,1556	0/0:37,0:36:36.57:0,37,2553	1/1:14,0:13:15.03:180,15,0	1/1:13,0:13:2.72:24,3,0	1/1:17,0:17:14.35:403,14,0	0/0:19,0:19:39.13:0,39,1371	0/1:16,0:15:99:460,0,291	0/0:24,0:24:60.21:0,60,2293	1/1:5,0:4:6.90:158,7,0
chr10	98308332	.	A	ACTCTCTCT	5272.81	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=6.958;DP=633;FS=4.059;HRun=0;HaplotypeScore=177.7396;InbreedingCoeff=0.7750;MQ=49.81;MQ0=22;MQRankSum=-7.421;QD=14.94;ReadPosRankSum=-5.264;VQSLOD=2.1367;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:26:18.05:315,18,0	0/0:9,0:9:21.06:0,21,468	0/1:42,0:12:42:42,0,148	0/0:37,0:16:28.11:0,28,766	0/0:19,0:19:27.09:0,27,645	1/1:14,0:14:6.42:66,6,0	1/1:29,0:28:30.57:634,31,0	1/1:24,0:20:37.39:628,37,0	1/1:14,0:13:17.34:327,17,0	0/0:28,0:28:57.17:0,57,1474	0/0:16,0:14:26.41:0,26,643	1/1:19,0:18:11.83:218,12,0	1/1:16,0:15:12.18:261,12,0	1/1:10,5:16:14.37:260,14,0	1/1:27,0:25:4.76:111,5,0	1/1:22,0:19:14.41:352,14,0	0/0:55,0:54:99:0,112,2637	1/1:14,0:15:33.90:510,34,0	0/0:18,0:15:39.13:0,39,954	0/0:18,0:18:38.88:0,39,1010	0/0:35,0:34:69.10:0,69,1629	1/1:20,0:19:15:248,15,0	1/1:14,0:14:5.81:84,6,0	1/1:23,0:23:11.11:150,11,0	0/0:20,0:20:33.04:0,33,737	0/1:24,0:24:98.25:933,0,98	0/0:25,0:25:54.18:0,54,1387	1/1:6,0:5:8.19:133,8,0
chr10	98312850	.	G	GAGA	1851.52	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=-6.009;DP=446;FS=27.161;HRun=0;HaplotypeScore=66.6660;InbreedingCoeff=0.9485;MQ=64.65;MQ0=12;MQRankSum=0.886;QD=42.08;ReadPosRankSum=-2.581;VQSLOD=1.5313;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:68.91:0,69,933	0/0:4,0:3:9:0,9,124	0/0:27,0:15:10.61:0,11,239	0/0:23,0:18:24:0,24,354	0/0:7,0:7:20.92:0,21,264	0/0:18,0:18:46.04:0,46,727	0/0:18,0:18:54.16:0,54,848	1/1:5,14:18:48.13:876,48,0	0/0:12,0:12:35.95:0,36,413	0/0:10,0:10:27.09:0,27,457	0/0:8,0:7:15.05:0,15,252	0/0:16,0:16:47.96:0,48,674	0/0:12,0:12:36.01:0,36,517	0/0:13,0:13:33.03:0,33,498	0/0:18,0:17:41.85:0,42,649	1/1:2,10:13:27.09:610,27,0	0/0:41,0:40:99:0,120,1803	0/0:21,0:20:51.08:0,51,793	0/0:19,0:18:51.14:0,51,799	0/0:7,0:7:21.02:0,21,302	0/0:26,0:25:66.18:0,66,1026	0/0:7,0:7:18.06:0,18,306	0/0:7,0:6:18.01:0,18,274	0/0:39,0:39:99:0,108,1636	0/0:10,0:9:27.08:0,27,431	1/1:1,9:11:24.08:506,24,0	0/0:10,0:9:26.97:0,27,382	./.
chr10	98314612	.	TG	T	11443.09	PASS	AB=0.528;AC=31;AF=0.554;AN=56;BaseQRankSum=12.060;DP=637;FS=6.807;HRun=5;HaplotypeScore=73.1517;InbreedingCoeff=0.9262;MQ=78.87;MQ0=0;MQRankSum=-4.522;QD=30.68;ReadPosRankSum=1.096;VQSLOD=5.4435;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,45:46:99:1531,135,0	0/0:11,0:11:30.10:0,30,407	0/0:15,0:15:39.12:0,39,504	0/0:14,0:14:36.09:0,36,447	0/0:12,0:12:36.11:0,36,476	1/1:1,11:12:33.09:374,33,0	1/1:1,36:37:99:1123,99,0	1/1:4,16:20:45.13:510,45,0	1/1:0,27:27:81.23:919,81,0	0/0:15,0:15:39.13:0,39,534	0/0:15,0:15:39.11:0,39,516	1/1:0,18:18:54.15:612,54,0	1/1:1,25:26:75.21:850,75,0	1/1:0,16:16:45.13:510,45,0	1/1:0,17:17:48.14:545,48,0	1/1:1,22:23:60.17:681,60,0	0/0:43,0:43:99:0,114,1559	1/1:3,34:37:96.27:1089,96,0	0/0:37,0:37:99:0,102,1380	0/0:7,0:7:21.07:0,21,287	0/0:59,0:59:99:0,175,2345	1/1:0,8:8:21.06:238,21,0	1/1:1,10:11:27.08:306,27,0	1/1:2,35:37:96.27:1089,96,0	0/0:15,0:15:45.15:0,45,615	0/1:3,25:28:41.11:725,0,41	0/0:21,0:21:60.15:0,60,770	1/1:0,10:10:30.09:340,30,0
chr10	98316197	.	CGT	C	583.33	PASS	AB=0.842;AC=9;AF=0.161;AN=56;BaseQRankSum=7.211;DP=739;FS=0.000;HRun=0;HaplotypeScore=143.7224;InbreedingCoeff=0.2973;MQ=48.11;MQ0=45;MQRankSum=-5.658;QD=5.16;ReadPosRankSum=-0.831;VQSLOD=2.6621;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:45.15:0,45,775	0/0:5,0:6:0.40:0,0,202	0/0:82,1:14:9.91:0,10,128	0/0:71,1:12:11.25:0,11,135	0/0:18,0:17:42.13:0,42,646	0/0:16,0:16:27.09:0,27,443	0/0:32,1:33:65.04:0,65,1179	0/1:7,12:18:55.02:346,0,55	0/1:17,1:17:2.72:3,0,566	0/0:33,0:33:81.28:0,81,1312	0/0:11,0:11:24.08:0,24,389	0/0:21,1:22:19.98:0,20,524	0/0:23,1:24:14.81:0,15,763	0/0:25,0:23:44.99:0,45,727	0/0:23,0:21:39.13:0,39,639	1/1:4,0:12:11.36:56,11,0	0/0:39,0:38:84.22:0,84,1296	0/0:19,0:18:48.16:0,48,763	0/0:18,0:14:24.08:0,24,390	0/0:10,0:10:21.07:0,21,339	0/0:88,0:87:99:0,159,2640	0/0:21,2:23:0.29:0,0,634	0/0:12,1:12:21.07:0,21,342	0/1:26,1:27:7.54:8,0,412	0/0:17,0:17:39.13:0,39,639	0/1:7,0:13:8.73:72,0,9	0/1:15,0:15:17.59:18,0,502	1/1:4,5:9:18.06:222,18,0
chr10	98316275	.	C	CGTGT	5315.34	PASS	AB=0.798;AC=24;AF=0.429;AN=56;BaseQRankSum=4.927;DP=691;FS=0.931;HRun=0;HaplotypeScore=183.3247;InbreedingCoeff=0.7849;MQ=54.61;MQ0=7;MQRankSum=-4.079;QD=22.91;ReadPosRankSum=1.101;VQSLOD=4.6874;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:6.03:0,6,928	0/0:9,0:9:24.08:0,24,406	0/0:51,0:16:21.05:0,21,308	0/1:44,0:17:5.66:6,0,339	0/0:17,0:17:39.11:0,39,644	1/1:3,3:8:5.57:151,6,0	1/1:6,9:19:3.62:516,4,0	0/1:8,0:23:14.41:46,0,14	1/1:3,9:15:37.65:728,38,0	0/0:32,0:33:81.24:0,81,1370	0/0:9,0:9:24.08:0,24,414	1/1:12,9:22:28.90:620,29,0	1/1:9,9:19:8.14:681,8,0	1/1:7,10:17:36.09:760,36,0	1/1:10,5:17:20.26:499,20,0	0/0:23,0:23:69.24:0,69,1191	0/0:29,0:28:72.24:0,72,1221	0/0:17,0:17:38.28:0,38,567	0/0:14,0:14:33.10:0,33,569	0/0:16,0:16:36.59:0,37,622	0/0:147,0:146:99:0,316,5246	1/1:3,7:11:26.28:584,26,0	1/1:3,4:7:6.91:153,7,0	1/1:6,10:16:17.26:265,17,0	0/0:18,0:17:39.13:0,39,674	0/0:23,0:23:57.66:0,58,973	0/0:8,0:8:12.04:0,12,207	1/1:2,4:7:13.60:307,14,0
chr10	98316293	.	CGT	C	965.74	PASS	AB=0.822;AC=16;AF=0.296;AN=54;BaseQRankSum=8.425;DP=613;FS=0.000;HRun=0;HaplotypeScore=150.0635;InbreedingCoeff=0.3267;MQ=50.96;MQ0=36;MQRankSum=-8.494;QD=8.18;ReadPosRankSum=-4.360;VQSLOD=2.6746;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:31:17.55:0,18,145	0/0:9,0:8:21.07:0,21,344	./.	0/0:34,0:10:3.01:0,3,49	0/0:18,0:17:42.13:0,42,660	1/1:5,2:6:9.03:110,9,0	0/1:13,1:13:29.77:30,0,44	0/0:19,0:13:24.07:0,24,349	1/1:6,9:15:0.85:286,1,0	0/0:29,0:27:63.20:0,63,969	0/0:11,0:11:24.08:0,24,391	0/1:8,4:12:37.58:61,0,38	1/1:4,7:11:17.82:183,18,0	1/1:4,5:9:11.99:131,12,0	0/1:4,5:9:23.18:178,0,23	0/0:7,0:26:43.75:0,44,604	0/0:32,0:31:80.83:0,81,1302	0/0:9,0:10:8.35:0,8,146	0/0:22,0:12:15.04:0,15,224	0/0:17,0:16:33.11:0,33,527	0/0:143,4:138:99:0,168,3991	0/1:6,4:10:34.86:68,0,35	0/0:2,1:3:1.25:0,1,3	1/1:8,7:15:4.19:53,4,0	0/0:18,0:18:39.13:0,39,633	0/0:24,0:24:47.32:0,47,451	0/1:7,0:7:9.26:9,0,145	0/1:7,1:6:22.64:23,0,142
chr10	98316295	.	TGTGTGTGTGTGTGTAATGCC	T	1819.30	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=3.906;DP=634;FS=16.229;HRun=0;HaplotypeScore=322.7118;InbreedingCoeff=0.5128;MQ=50.05;MQ0=41;MQRankSum=1.045;QD=13.09;ReadPosRankSum=2.172;VQSLOD=0.9559;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:22.81:173,23,0	0/0:9,0:8:21.07:0,21,256	./.	0/1:33,0:8:18.68:19,0,27	0/0:19,0:17:43.38:0,43,672	0/0:8,0:7:9.16:0,9,90	0/0:15,0:14:10.06:0,10,57	0/0:18,0:12:14.23:0,14,93	0/0:15,0:15:29.53:0,30,196	0/0:30,0:28:45.12:0,45,609	0/0:13,0:13:26.52:0,27,441	0/1:14,0:14:0.55:1,0,66	0/0:12,0:12:20.45:0,20,187	0/0:8,0:8:8.99:0,9,43	0/0:10,0:10:0.82:0,1,106	0/1:25,0:26:6.72:1006,0,7	0/0:33,0:32:82.51:0,83,1867	1/1:9,0:9:12:135,12,0	0/0:20,0:10:17.76:0,18,263	0/0:18,0:17:37.36:0,37,736	0/0:158,0:147:99:0,264,5199	0/0:12,0:12:16.47:0,16,175	0/0:3,0:3:3.01:0,3,32	0/0:18,0:17:12.68:0,13,110	0/0:19,0:19:42.14:0,42,755	1/1:9,16:25:6.94:627,7,0	0/0:7,0:7:12.04:0,12,265	0/0:8,0:6:14.88:0,15,201
chr10	98316315	.	CGT	C	493.08	PASS	AB=0.865;AC=10;AF=0.192;AN=52;BaseQRankSum=6.186;DP=634;FS=0.000;HRun=0;HaplotypeScore=181.6423;InbreedingCoeff=-0.0642;MQ=44.36;MQ0=66;MQRankSum=-6.552;QD=4.25;ReadPosRankSum=-3.550;VQSLOD=1.7621;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:24:19.70:0,20,132	0/0:8,0:7:12.02:0,12,172	./.	./.	0/0:21,0:18:24.64:0,25,344	0/1:12,3:13:73.11:73,0,155	0/1:8,4:12:92.26:92,0,141	0/0:24,0:8:9:0,9,120	0/1:14,1:15:88.94:89,0,174	0/0:22,0:19:30.97:0,31,461	0/0:14,0:13:17.83:0,18,283	0/1:12,1:12:21.09:21,0,182	0/1:13,1:14:53.31:53,0,246	0/0:12,0:12:5.88:0,6,240	0/1:13,4:17:99:126,0,145	0/0:22,0:28:57.11:0,57,725	0/0:32,1:32:33.74:0,34,976	0/1:6,1:10:47.12:47,0,140	0/0:24,0:7:17.88:0,18,238	0/0:17,0:15:24.05:0,24,344	0/0:149,0:128:99:0,237,3661	0/1:13,2:15:77.54:78,0,145	1/1:3,1:4:5.93:54,6,0	0/0:20,4:23:15.48:0,15,246	0/0:18,0:18:4.39:0,4,484	0/0:20,0:20:34.28:0,34,430	0/0:7,0:6:17.80:0,18,254	0/0:10,0:8:24.08:0,24,381
chr10	98316337	.	CGT	C	2829.17	PASS	AB=0.729;AC=17;AF=0.304;AN=56;BaseQRankSum=4.509;DP=638;FS=59.060;HRun=0;HaplotypeScore=161.7207;InbreedingCoeff=-0.1380;MQ=45.73;MQ0=62;MQRankSum=-3.479;QD=11.18;ReadPosRankSum=-0.327;VQSLOD=1.3631;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:27:21.41:0,21,469	0/0:5,0:5:9.03:0,9,147	0/0:36,0:2:6.02:0,6,98	0/0:19,0:2:4.83:0,5,54	0/0:17,1:14:13.90:0,14,232	0/1:5,8:11:9.96:246,0,10	0/1:11,10:21:99:323,0,161	0/0:22,0:6:9.03:0,9,139	0/1:2,9:12:69.95:243,0,70	0/0:27,1:22:19.30:0,19,698	0/1:15,1:14:10.38:10,0,318	0/1:7,8:14:70.97:228,0,71	0/1:4,11:16:6.99:418,0,7	0/1:6,11:17:50.79:361,0,51	1/1:9,12:21:3.49:376,3,0	0/1:26,0:24:15.53:16,0,473	0/0:32,1:34:40.38:0,40,1140	0/1:10,2:11:68.13:68,0,264	0/0:21,0:6:18.01:0,18,264	0/1:12,1:11:13.06:13,0,320	0/0:131,2:120:99:0,171,3589	0/1:5,10:15:35.75:230,0,36	0/1:4,10:14:48.10:233,0,48	1/1:8,14:21:17.95:206,18,0	0/1:17,1:18:20.22:20,0,456	0/0:19,0:19:13.07:0,13,159	0/0:9,0:8:17.30:0,17,275	0/0:9,0:8:15.52:0,16,247
chr10	98316359	.	CGT	C	1032.17	PASS	AB=0.944;AC=5;AF=0.089;AN=56;BaseQRankSum=1.196;DP=775;FS=1.253;HRun=0;HaplotypeScore=217.1053;InbreedingCoeff=0.7328;MQ=48.28;MQ0=39;MQRankSum=-1.936;QD=14.34;ReadPosRankSum=-1.644;VQSLOD=3.3588;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,32:36:52.46:622,52,0	0/0:6,0:6:12.02:0,12,173	0/0:48,1:16:39.13:0,39,640	0/0:62,0:22:40.90:0,41,593	0/0:13,0:13:26.34:0,26,409	0/1:16,1:14:6.43:6,0,421	0/0:30,0:30:56.75:0,57,922	0/0:14,0:11:20.96:0,21,388	0/0:20,0:20:48.25:0,48,701	0/0:28,0:24:66.65:0,67,1068	0/0:17,0:15:35.85:0,36,529	0/0:19,0:18:44.17:0,44,700	0/0:21,0:21:55.05:0,55,850	0/0:28,0:28:44.45:0,44,714	0/0:32,0:32:69.88:0,70,1049	0/0:29,0:29:63.12:0,63,953	0/0:33,1:33:64.69:0,65,1115	1/1:5,14:17:6.86:520,7,0	0/0:14,0:11:27.08:0,27,425	0/0:17,0:14:30.10:0,30,479	0/0:118,3:116:98.78:0,99,3226	0/0:25,0:25:46.88:0,47,714	0/0:18,0:18:36.12:0,36,567	0/0:36,0:35:40.12:0,40,620	0/0:20,0:20:44.92:0,45,716	0/0:21,0:19:10.08:0,10,558	0/0:15,0:14:42.14:0,42,691	0/0:4,0:7:14.61:0,15,127
chr10	98320893	.	CAG	C	5620.82	PASS	AB=0.929;AC=21;AF=0.375;AN=56;BaseQRankSum=10.408;DP=804;FS=2.432;HRun=0;HaplotypeScore=109.8106;InbreedingCoeff=0.9415;MQ=72.88;MQ0=10;MQRankSum=0.637;QD=22.22;ReadPosRankSum=4.295;VQSLOD=5.5577;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,2:36:24.37:0,24,1420	0/0:12,0:12:30.08:0,30,455	0/0:43,0:24:38.05:0,38,343	0/0:75,0:38:38.31:0,38,511	0/0:20,0:20:48.16:0,48,788	1/1:4,18:22:42.13:525,42,0	1/1:5,24:29:48.15:600,48,0	0/0:40,0:40:78.21:0,78,1203	1/1:5,21:26:48.39:633,48,0	0/0:31,0:31:74.98:0,75,1161	0/0:16,0:16:42.13:0,42,660	1/1:2,32:34:69.21:863,69,0	1/1:8,22:29:54.09:654,54,0	1/1:7,19:26:45.14:563,45,0	1/1:1,19:20:45.14:563,45,0	0/0:21,0:21:54.09:0,54,537	0/0:38,2:40:39.39:0,39,1633	0/0:48,0:48:99:0,126,1997	0/0:20,0:17:36.11:0,36,558	0/1:12,1:13:4.80:5,0,441	0/0:60,0:60:99:0,156,2430	1/1:2,14:16:24.08:300,24,0	1/1:4,8:13:23.91:276,24,0	1/1:3,21:24:51.16:638,51,0	0/0:21,0:21:45.15:0,45,739	0/0:23,0:23:49.76:0,50,593	0/0:24,0:24:60.18:0,60,956	0/0:21,0:21:56.99:0,57,825
chr10	98321235	.	GCCGCGTGCACCT	G	3888.94	PASS	AC=26;AF=0.500;AN=52;BaseQRankSum=8.023;DP=498;FS=2.297;HRun=0;HaplotypeScore=160.7748;InbreedingCoeff=0.8065;MQ=67.61;MQ0=0;MQRankSum=-9.224;QD=15.31;ReadPosRankSum=-0.550;VQSLOD=2.8408;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,15:33:15.05:370,15,0	0/0:8,0:8:9.03:0,9,267	./.	0/0:11,0:10:3.84:0,4,13	0/0:12,0:12:18.04:0,18,739	1/1:8,3:11:6.02:207,6,0	1/1:20,14:34:8.99:266,9,0	./.	1/1:7,6:13:12.51:400,13,0	0/0:14,0:14:21.07:0,21,1095	0/0:9,0:9:9.03:0,9,362	1/1:7,9:16:6.49:176,6,0	1/1:7,7:14:15.05:486,15,0	1/1:9,13:22:15.05:438,15,0	1/1:8,10:18:12.04:326,12,0	0/0:10,0:10:21.07:0,21,1010	0/0:33,0:33:69.24:0,69,3795	1/1:18,13:31:15.05:463,15,0	0/0:16,0:15:15.05:0,15,622	0/0:6,0:6:6.02:0,6,320	0/0:55,0:55:75.24:0,75,3544	1/1:8,7:15:5.60:196,6,0	1/1:4,5:9:2.74:87,3,0	1/1:13,13:26:10.84:372,11,0	0/0:11,0:11:15.05:0,15,845	0/0:18,0:18:42.13:0,42,1797	0/0:15,0:15:18.06:0,18,739	1/1:9,3:12:3.01:103,3,0
chr10	98323042	.	AGCTG	A	2397.63	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.130;DP=843;FS=8.988;HRun=0;HaplotypeScore=137.2564;InbreedingCoeff=0.9994;MQ=79.74;MQ0=0;MQRankSum=-6.686;QD=51.01;ReadPosRankSum=-4.380;VQSLOD=3.2776;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,163,4358	0/0:10,0:10:30.10:0,30,820	0/0:24,0:24:59.41:0,59,1505	0/0:20,0:20:60.20:0,60,1419	0/0:23,0:23:66.23:0,66,1782	0/0:24,0:24:72.25:0,72,1953	0/0:38,0:38:99:0,111,2972	1/1:2,34:36:99:1938,105,0	0/0:25,0:25:72.25:0,72,1972	0/0:21,0:21:60.21:0,60,1623	0/0:13,0:13:36.11:0,36,930	0/0:44,0:44:99:0,123,3336	0/0:40,0:40:99:0,117,3144	0/0:24,0:24:69.24:0,69,1775	0/0:50,0:50:99:0,151,4077	0/0:33,0:33:99:0,99,2641	0/0:41,0:41:99:0,114,3033	0/0:25,0:24:72.25:0,72,1968	0/0:29,0:29:84.29:0,84,2224	0/0:14,0:14:42.14:0,42,1080	0/0:75,0:75:99:0,220,5870	0/0:15,0:15:45.15:0,45,1221	0/0:17,0:17:48.16:0,48,1284	0/0:56,0:56:99:0,169,4568	0/0:25,0:25:72.25:0,72,1964	0/0:22,0:22:66.23:0,66,1761	0/0:30,0:30:90.31:0,90,2443	1/1:1,10:11:30.10:581,30,0
chr10	98324532	.	CCAGTGCAACT	C	4504.84	PASS	AB=0.533;AC=5;AF=0.093;AN=54;BaseQRankSum=10.636;DP=661;FS=9.477;HRun=0;HaplotypeScore=213.7027;InbreedingCoeff=0.7499;MQ=88.68;MQ0=0;MQRankSum=-9.893;QD=80.44;ReadPosRankSum=2.032;VQSLOD=3.5096;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.27:0,78,3954	0/0:12,0:12:36.11:0,36,1712	0/0:33,0:33:93.32:0,93,4235	0/0:19,0:19:54.18:0,54,2414	0/0:28,0:28:81.28:0,81,3963	0/0:23,0:23:69.24:0,69,3415	0/0:17,0:17:48.16:0,48,2558	./.	0/0:31,0:31:90.31:0,90,4515	0/0:29,0:29:84.29:0,84,4250	0/0:16,0:16:45.15:0,45,2291	0/0:29,0:29:84.29:0,84,4316	0/0:14,0:14:42.14:0,42,2242	0/0:19,0:19:57.20:0,57,2835	0/0:24,0:24:72.25:0,72,3833	1/1:2,26:28:72.25:2401,72,0	0/0:23,0:23:69.24:0,69,3684	0/0:16,0:16:48.16:0,48,2396	0/0:21,0:21:60.20:0,60,2878	0/0:34,0:34:99:0,102,5261	0/0:34,0:34:99:0,99,4742	0/0:30,0:30:90.31:0,90,4378	0/0:22,0:22:66.23:0,66,3404	0/0:20,0:20:60.21:0,60,3200	0/0:28,0:28:84.29:0,84,4465	0/1:3,21:24:99:1982,0,251	0/0:45,0:45:99:0,135,7070	1/1:4,0:4:9.01:122,9,0
chr10	98324598	.	C	CT	1067.32	PASS	AB=0.877;AC=9;AF=0.173;AN=52;BaseQRankSum=4.199;DP=473;FS=1.174;HRun=10;HaplotypeScore=86.0722;InbreedingCoeff=0.5901;MQ=75.44;MQ0=0;MQRankSum=-1.115;QD=10.67;ReadPosRankSum=-2.430;VQSLOD=2.6554;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,6:12:11.11:142,11,0	0/0:11,0:11:8.48:0,8,200	0/1:24,0:21:10.61:11,0,210	0/0:18,0:17:19.76:0,20,159	0/0:26,0:26:65.38:0,65,535	0/0:14,0:14:26.85:0,27,213	0/0:9,0:9:17.96:0,18,148	./.	0/0:13,0:13:38.96:0,39,320	0/0:24,1:25:47.48:0,47,512	0/0:12,0:12:32.95:0,33,271	0/0:12,0:12:22.20:0,22,175	0/0:11,0:12:31.99:0,32,252	0/0:10,0:10:23.96:0,24,197	0/0:17,0:18:34.98:0,35,276	1/1:11,18:29:16.84:579,17,0	0/0:24,0:24:59.88:0,60,488	1/1:2,6:8:18.05:192,18,0	0/0:24,0:24:38.92:0,39,318	0/0:34,1:35:48.88:0,49,608	0/1:9,0:10:4.07:4,0,131	0/0:20,0:20:36:0,36,354	0/0:16,0:16:30.84:0,31,248	0/0:5,0:5:5.97:0,6,49	0/0:27,0:27:62.90:0,63,517	0/1:7,10:17:11.16:287,0,11	0/0:41,1:42:72.87:0,73,805	./.
chr10	98324691	.	CGT	C	6893.16	PASS	AC=20;AF=0.385;AN=52;BaseQRankSum=15.137;DP=725;FS=34.361;HRun=0;HaplotypeScore=121.8341;InbreedingCoeff=0.9787;MQ=59.68;MQ0=4;MQRankSum=-1.951;QD=26.51;ReadPosRankSum=3.524;VQSLOD=3.6116;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.20:0,60,984	0/0:20,0:20:51.17:0,51,850	0/0:10,0:6:5.99:0,6,87	0/0:15,0:9:11.98:0,12,169	0/0:24,0:24:60.19:0,60,978	1/1:0,12:12:27.09:343,27,0	1/1:2,23:25:39.12:496,39,0	./.	1/1:1,26:27:54.17:687,54,0	0/0:41,0:41:99:0,108,1732	0/0:25,0:25:66.21:0,66,1069	1/1:2,24:26:57.18:725,57,0	1/1:0,27:28:60.02:739,60,0	1/1:0,29:29:72.23:915,72,0	1/1:1,23:24:44.98:548,45,0	0/0:44,2:46:35.09:0,35,1676	0/0:30,1:31:43.08:0,43,1255	0/0:22,0:22:66.19:0,66,1067	0/0:24,0:24:60.20:0,60,985	0/0:38,1:39:70.17:0,70,1652	0/0:65,0:65:99:0,158,2849	1/1:2,32:34:78.25:992,78,0	1/1:5,20:25:45.14:573,45,0	1/1:2,27:29:69.22:875,69,0	0/0:24,0:24:69.18:0,69,1049	0/0:27,0:27:66.14:0,66,1043	0/0:28,0:28:75.24:0,75,1208	./.
chr10	98324879	.	TTGTGTG	T	3124.47	PASS	AB=0.677;AC=7;AF=0.135;AN=52;BaseQRankSum=7.121;DP=1020;FS=13.780;HRun=0;HaplotypeScore=290.2676;InbreedingCoeff=0.6075;MQ=56.67;MQ0=16;MQRankSum=-9.267;QD=19.90;ReadPosRankSum=-0.533;VQSLOD=1.4282;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,10:36:0.91:207,1,0	0/0:6,0:6:15.05:0,15,470	0/0:37,0:19:12.04:0,12,205	0/0:52,0:31:3.01:0,3,48	0/0:20,0:22:42.13:0,42,990	0/0:12,0:21:9.03:0,9,181	0/0:30,0:39:9.02:0,9,144	./.	0/0:39,0:54:23.89:0,24,474	0/0:42,0:44:78.26:0,78,2072	0/0:23,0:23:45.15:0,45,1289	0/0:36,0:52:44.98:0,45,768	0/0:35,0:50:33.01:0,33,573	0/0:41,0:58:29.91:0,30,500	0/0:40,0:67:21.10:0,21,296	1/1:24,40:67:93.24:1720,93,0	0/0:38,0:39:76.79:0,77,2122	0/1:11,9:21:34.72:381,0,35	0/0:20,0:20:35.54:0,36,670	0/0:28,0:28:50.78:0,51,1427	0/0:86,0:94:99:0,135,3516	0/0:25,0:34:8.38:0,8,170	0/0:5,0:11:3.01:0,3,66	0/0:40,0:45:29.79:0,30,583	0/0:29,0:29:57.65:0,58,1595	1/1:17,15:33:48.16:950,48,0	0/0:29,0:30:57.02:0,57,1654	./.
chr10	98324998	.	T	TGC	247.16	PASS	AB=0.600;AC=3;AF=0.056;AN=54;BaseQRankSum=6.561;DP=934;FS=0.000;HRun=0;HaplotypeScore=167.7016;InbreedingCoeff=0.4911;MQ=58.92;MQ0=2;MQRankSum=-5.400;QD=7.97;ReadPosRankSum=-2.415;VQSLOD=3.0211;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,120,1759	0/0:14,0:14:39.13:0,39,597	0/0:54,0:41:99:0,120,1793	0/0:36,0:32:71.15:0,71,1093	0/0:30,0:30:81.23:0,81,1169	0/0:25,0:25:69.20:0,69,1009	0/0:23,0:23:66.21:0,66,983	0/0:1,0:1:2.74:0,3,12	0/0:44,0:44:99:0,120,1811	0/0:47,0:47:99:0,129,1940	0/0:24,0:24:60.19:0,60,896	0/0:48,0:48:99:0,135,2059	0/0:59,0:59:99:0,172,2570	0/0:49,0:49:99:0,129,1930	0/0:57,0:57:99:0,150,2270	1/1:5,11:16:3.01:52,3,0	0/0:27,0:27:75.71:0,76,1112	0/0:20,0:20:54.18:0,54,816	0/0:23,0:21:54.18:0,54,813	0/0:37,0:37:96.33:0,96,1463	0/0:54,0:53:99:0,150,2249	0/0:32,0:32:87.27:0,87,1287	0/0:32,0:32:57:0,57,871	0/0:47,0:47:99:0,111,1588	0/0:36,0:36:96.33:0,96,1468	0/1:5,10:15:8.18:286,0,8	0/0:34,0:32:99:0,99,1478	./.
chr10	98326526	.	GTA	G	346.81	PASS	AB=0.624;AC=16;AF=0.571;AN=28;BaseQRankSum=1.065;DP=88;FS=1.909;HRun=0;HaplotypeScore=17.6571;InbreedingCoeff=0.1736;MQ=50.81;MQ0=5;MQRankSum=-0.882;QD=8.07;ReadPosRankSum=-0.639;VQSLOD=2.4068;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:5:5.68:28,6,0	1/1:1,0:1:3.01:35,3,0	./.	0/0:20,0:4:0:0,0,0	./.	0/0:2,0:4:2.22:0,2,7	1/1:0,0:2:2.84:14,3,0	./.	./.	0/1:1,1:2:11.34:11,0,41	0/0:1,0:2:3:0,3,26	1/1:0,0:1:2.37:8,2,0	1/1:1,0:4:2.84:14,3,0	./.	1/1:0,0:1:2.84:14,3,0	./.	0/1:5,12:18:13.89:294,0,14	1/1:6,0:8:5.68:28,6,0	./.	./.	./.	./.	./.	./.	0/0:1,0:1:3.01:0,3,47	./.	0/0:3,0:3:3:0,3,26	./.
chr10	98329343	.	AGAGG	A	1221.88	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.715;DP=779;FS=15.431;HRun=0;HaplotypeScore=148.1504;InbreedingCoeff=0.9715;MQ=59.11;MQ0=19;MQRankSum=-2.592;QD=34.91;ReadPosRankSum=-3.822;VQSLOD=2.1955;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,119,2746	0/0:13,0:13:30.08:0,30,699	0/0:59,0:16:29.25:0,29,696	0/0:93,0:30:10.98:0,11,684	0/0:26,0:26:69.17:0,69,1599	0/0:19,0:19:51.05:0,51,958	0/0:30,0:30:90.18:0,90,1828	1/1:5,23:27:64.66:1103,65,0	0/0:19,0:19:57.15:0,57,1229	0/0:26,0:26:63.22:0,63,1656	0/0:18,0:18:51.08:0,51,1149	0/0:30,0:30:87.18:0,87,2007	0/0:26,0:26:72.13:0,72,1583	0/0:32,0:32:96.15:0,96,2266	0/0:29,0:29:87.15:0,87,1912	0/0:28,0:28:84.23:0,84,1802	0/0:22,0:22:63.18:0,63,1503	0/0:15,0:15:38.93:0,39,762	0/0:20,0:20:57.12:0,57,1162	0/0:15,0:15:42.09:0,42,901	0/0:39,0:39:93.15:0,93,2308	0/0:15,0:15:42.12:0,42,969	0/0:19,0:19:51.09:0,51,1043	0/0:40,0:40:99:0,117,2655	0/0:15,0:15:42.14:0,42,1079	0/0:24,0:24:69.18:0,69,1398	0/0:28,0:28:75.17:0,75,1619	1/1:6,1:7:15.03:237,15,0
chr10	98329347	.	GGA	G	126.11	PASS	AB=0.908;AC=9;AF=0.161;AN=56;BaseQRankSum=6.890;DP=767;FS=19.109;HRun=0;HaplotypeScore=123.9254;InbreedingCoeff=0.3498;MQ=60.65;MQ0=18;MQRankSum=-3.361;QD=1.07;ReadPosRankSum=-2.471;VQSLOD=0.8444;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,108,1767	0/0:11,0:11:24.08:0,24,399	0/0:54,0:14:32.90:0,33,495	0/0:91,0:30:40.19:0,40,730	0/0:26,1:27:34.34:0,34,1016	0/1:16,2:18:30.56:31,0,599	0/0:28,1:29:43.41:0,43,1227	1/1:25,0:24:42.37:160,42,0	0/0:18,0:18:45.15:0,45,745	0/0:21,0:21:63.21:0,63,1013	0/0:17,1:18:10.29:0,10,673	0/0:29,0:29:75.26:0,75,1241	0/0:28,0:28:69.24:0,69,1127	0/0:34,0:34:87.30:0,87,1430	0/0:30,2:32:5.54:0,6,1140	0/0:30,0:30:60.18:0,60,968	0/0:21,0:21:54.18:0,54,893	0/1:14,2:16:1.76:2,0,473	0/1:18,2:20:23.90:24,0,680	0/1:15,1:16:1.73:2,0,509	0/0:38,0:38:77.98:0,78,1325	0/0:16,0:16:39.10:0,39,597	0/1:16,2:18:12.10:12,0,560	0/0:38,2:40:17.60:0,18,1370	0/0:19,0:19:54.16:0,54,830	0/0:24,0:24:57.19:0,57,945	0/0:27,0:27:69.20:0,69,1119	1/1:5,0:5:7.77:32,8,0
chr10	98330021	.	G	GA	5056.92	PASS	AB=0.915;AC=26;AF=0.464;AN=56;BaseQRankSum=-9.597;DP=644;FS=7.478;HRun=11;HaplotypeScore=77.0312;InbreedingCoeff=0.7661;MQ=77.11;MQ0=1;MQRankSum=0.324;QD=16.05;ReadPosRankSum=2.211;VQSLOD=5.5793;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,36:42:53.61:900,54,0	0/0:13,0:13:26.86:0,27,206	0/0:28,0:25:9.82:0,10,176	0/0:19,0:16:0.50:0,1,69	0/0:30,2:34:48.28:0,48,536	1/1:4,15:22:53.61:500,54,0	1/1:10,16:26:1.62:380,2,0	0/0:6,0:29:40.72:0,41,118	1/1:3,13:18:38.75:363,39,0	0/0:24,0:24:56.72:0,57,441	0/1:18,2:20:15.97:16,0,257	1/1:11,15:26:0.64:174,1,0	1/1:4,17:21:45.09:457,45,0	1/1:4,13:18:11.57:320,12,0	1/1:5,19:25:53.94:531,54,0	0/0:19,0:21:54.86:0,55,404	0/0:18,0:18:38.81:0,39,299	1/1:3,11:14:27.05:274,27,0	0/0:24,1:26:28.36:0,28,391	0/0:30,0:32:32.33:0,32,455	0/1:21,2:23:4.12:4,0,335	1/1:4,11:16:35.91:348,36,0	1/1:7,12:19:33.07:335,33,0	1/1:2,23:24:45.09:457,45,0	0/0:15,0:17:42.92:0,43,314	0/0:23,1:25:16.35:0,16,299	0/0:29,0:30:64.73:0,65,491	0/0:2,0:11:17.24:0,17,64
chr10	98330227	.	GCATCTC	G	15939.41	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=18.663;DP=694;FS=0.300;HRun=0;HaplotypeScore=173.1484;InbreedingCoeff=0.9995;MQ=79.36;MQ0=0;MQRankSum=-20.193;QD=53.31;ReadPosRankSum=4.426;VQSLOD=5.0571;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,33:46:69.15:1524,69,0	0/0:9,0:9:27.09:0,27,954	0/0:31,0:32:90.04:0,90,2693	0/0:26,0:26:69.06:0,69,2064	0/0:26,0:26:75.26:0,75,2644	1/1:2,19:21:51.18:1204,51,0	1/1:2,17:19:39.13:921,39,0	0/0:32,0:32:90.31:0,90,3075	1/1:2,21:23:57.20:1346,57,0	0/0:23,0:23:69.24:0,69,2427	0/0:24,0:24:66.23:0,66,2318	1/1:0,20:20:57.20:1346,57,0	1/1:2,26:28:72.25:1700,72,0	1/1:2,21:23:60.21:1416,60,0	1/1:1,32:33:81.28:1908,81,0	0/0:28,0:28:84.29:0,84,2935	0/0:27,0:27:78.27:0,78,2714	1/1:0,18:18:48.16:1134,48,0	0/0:23,0:23:69.24:0,69,2371	0/0:21,0:21:63.22:0,63,2178	0/0:31,0:31:84.29:0,84,2927	1/1:4,31:35:90.27:2060,90,0	1/1:2,14:16:39.09:865,39,0	1/1:3,14:17:24.04:515,24,0	0/0:25,0:25:75.26:0,75,2634	0/0:26,0:26:72.24:0,72,2378	0/0:29,0:29:81.28:0,81,2857	0/0:13,0:13:39.11:0,39,1232
chr10	98335515	.	AGAGG	A	1124.71	PASS	AB=0.957;AC=5;AF=0.093;AN=54;BaseQRankSum=5.212;DP=385;FS=2.699;HRun=0;HaplotypeScore=61.2261;InbreedingCoeff=0.6570;MQ=72.15;MQ0=6;MQRankSum=-0.308;QD=13.08;ReadPosRankSum=0.237;VQSLOD=3.0220;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,14:23:48.15:789,48,0	./.	0/0:39,0:15:11.23:0,11,241	0/1:43,0:26:4.03:4,0,306	0/0:6,0:5:9.02:0,9,170	0/0:12,0:12:15.05:0,15,375	0/0:19,0:17:33:0,33,583	0/0:7,0:7:11.79:0,12,75	0/0:9,0:9:18.04:0,18,350	0/0:9,0:9:15.05:0,15,375	0/0:8,0:8:18.04:0,18,329	0/0:9,0:9:23.98:0,24,359	0/0:14,0:13:27.05:0,27,490	0/0:6,0:6:9.03:0,9,178	0/0:17,0:16:42.08:0,42,864	0/0:14,0:14:27.07:0,27,516	0/0:20,0:20:45.05:0,45,798	1/1:10,7:17:29.53:454,30,0	0/0:8,0:8:6:0,6,52	0/0:9,0:9:9.03:0,9,225	0/0:22,0:21:42.10:0,42,913	0/0:11,0:11:27.07:0,27,498	0/0:10,0:10:24.06:0,24,498	0/0:6,0:6:12.02:0,12,202	0/0:6,0:6:18.03:0,18,336	0/0:20,0:20:36.06:0,36,724	0/0:14,0:14:33.04:0,33,642	0/0:2,0:2:6.02:0,6,117
chr10	98335614	.	A	AAGAG	451.25	PASS	AC=2;AF=0.056;AN=36;BaseQRankSum=0.222;DP=237;FS=7.762;HRun=0;HaplotypeScore=42.1998;InbreedingCoeff=0.3923;MQ=54.54;MQ0=19;MQRankSum=-1.246;QD=28.20;ReadPosRankSum=-0.692;VQSLOD=1.9897;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,5:14:27.07:538,27,0	./.	0/0:32,0:7:3.01:0,3,48	0/0:50,0:13:5.91:0,6,62	0/0:5,0:6:9.02:0,9,124	0/0:9,0:8:3:0,3,27	./.	./.	./.	0/0:6,0:5:12:0,12,165	0/0:6,0:6:12.04:0,12,191	0/0:6,0:5:0.47:0,0,1	0/0:4,0:4:2.97:0,3,20	./.	0/0:8,0:8:0:0,0,0	0/0:6,0:5:5.97:0,6,48	0/0:8,0:8:12.04:0,12,188	./.	0/0:4,0:4:6.01:0,6,95	0/0:8,0:9:12.03:0,12,173	0/0:18,0:18:12.25:0,12,180	0/0:5,0:5:0:0,0,0	./.	./.	0/0:5,0:5:3.01:0,3,48	./.	0/0:3,0:3:4.26:0,4,51	./.
chr10	98335632	.	GAGAGAGAGA	G	261.65	PASS	AB=1.000;AC=13;AF=0.271;AN=48;BaseQRankSum=0.476;DP=236;FS=19.786;HRun=0;HaplotypeScore=60.8904;InbreedingCoeff=0.5256;MQ=51.23;MQ0=20;MQRankSum=-1.874;QD=9.69;ReadPosRankSum=-1.302;VQSLOD=-0.0348;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:36.48:0,36,848	./.	0/0:40,0:9:23.88:0,24,466	0/0:48,0:13:31.63:0,32,452	0/0:5,0:5:12.04:0,12,494	1/1:2,3:4:3.48:99,3,0	./.	0/1:8,0:6:11.63:12,0,17	./.	0/0:7,0:6:15.05:0,15,653	0/0:7,0:7:15:0,15,590	1/1:2,3:4:3.01:91,3,0	1/1:3,0:2:1.64:52,2,0	./.	0/0:5,0:5:0.47:0,0,1	0/0:9,0:8:6.23:0,6,166	0/0:8,0:8:18.06:0,18,639	0/0:4,0:4:12.02:0,12,188	0/0:5,0:5:12.04:0,12,405	0/0:7,0:7:12.51:0,13,517	0/0:19,0:19:39.43:0,39,1098	1/1:3,0:3:3.01:75,3,0	1/1:2,0:2:3.01:57,3,0	0/0:4,0:4:0.47:0,0,1	0/0:5,0:5:12.04:0,12,432	1/1:1,0:1:1.55:4,2,0	0/0:5,0:5:12.04:0,12,402	0/0:2,0:1:2.88:0,3,15
chr10	98335644	.	T	TG	357.22	PASS	AB=0.931;AC=13;AF=0.250;AN=52;BaseQRankSum=2.070;DP=224;FS=4.266;HRun=5;HaplotypeScore=47.5387;InbreedingCoeff=0.4139;MQ=60.36;MQ0=11;MQRankSum=-1.533;QD=6.87;ReadPosRankSum=-0.435;VQSLOD=-0.5662;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,13:20:29.99:343,30,0	./.	0/0:35,0:8:20.17:0,20,160	0/0:36,1:14:14.10:0,14,166	0/0:4,0:4:6.01:0,6,64	1/1:5,0:4:1.82:5,2,0	0/1:5,1:5:4.05:13,0,4	0/0:8,0:7:2.88:0,3,15	0/1:2,0:2:0:0,0,0	0/0:5,0:5:9.01:0,9,89	0/0:7,0:7:8.53:0,9,96	1/1:4,0:4:3.01:35,3,0	0/0:5,0:4:0.47:0,0,1	0/1:1,0:1:0:0,0,0	1/1:6,0:6:3.01:35,3,0	0/0:9,0:8:5.43:0,5,26	0/0:9,0:9:9.38:0,9,78	0/1:3,1:4:38.26:50,0,38	0/0:5,0:5:8.86:0,9,96	0/0:6,0:6:11.91:0,12,129	0/0:16,0:16:37.82:0,38,375	0/0:2,0:2:1.55:0,2,4	./.	0/0:8,0:8:2.72:0,3,29	0/0:7,0:7:14.96:0,15,146	0/1:2,0:2:0:0,0,0	0/0:6,0:6:14.56:0,15,124	0/0:1,0:1:2.88:0,3,15
chr10	98335729	.	AGAGG	A	3817.23	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=6.258;DP=377;FS=0.000;HRun=0;HaplotypeScore=85.0232;InbreedingCoeff=0.8244;MQ=68.43;MQ0=14;MQRankSum=-6.823;QD=35.68;ReadPosRankSum=-1.991;VQSLOD=3.1769;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.17:0,51,1241	0/0:2,0:2:6.02:0,6,151	0/0:52,0:18:21.03:0,21,323	0/0:75,0:25:18.12:0,18,258	0/0:3,0:3:3.01:0,3,44	1/1:4,4:8:2.38:289,2,0	1/1:8,7:15:39.11:596,39,0	0/0:16,0:16:33.11:0,33,694	1/1:7,4:11:30.10:484,30,0	0/0:17,0:17:48.16:0,48,1116	0/0:5,0:5:12.04:0,12,256	1/1:5,4:9:24.08:397,24,0	1/1:6,4:9:27.09:462,27,0	1/1:11,5:16:39.13:654,39,0	1/1:2,3:5:15.04:230,15,0	0/0:6,0:6:6.02:0,6,151	0/0:14,0:14:39.05:0,39,843	0/0:5,0:5:12.04:0,12,302	0/0:9,0:9:18.06:0,18,449	0/0:6,0:6:9.03:0,9,226	0/0:22,0:22:32.76:0,33,768	1/1:5,8:13:27.09:440,27,0	1/1:5,2:7:12.04:189,12,0	1/1:10,3:13:5.75:76,6,0	0/0:3,0:3:6.02:0,6,151	0/0:3,0:3:6.02:0,6,150	0/0:7,0:7:15.52:0,16,373	0/0:4,0:4:6.02:0,6,151
chr10	98335742	.	G	GGA	2223.68	PASS	AB=0.849;AC=15;AF=0.268;AN=56;BaseQRankSum=7.252;DP=370;FS=7.757;HRun=0;HaplotypeScore=81.6848;InbreedingCoeff=0.2462;MQ=74.14;MQ0=11;MQRankSum=-7.291;QD=13.56;ReadPosRankSum=0.020;VQSLOD=2.8705;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:54.18:0,54,873	0/0:3,0:3:6.02:0,6,98	0/1:47,0:17:1.25:1,0,276	0/0:64,0:24:14.19:0,14,242	0/0:1,0:1:3.01:0,3,44	0/1:7,3:9:20.80:90,0,21	0/1:14,3:17:21.18:379,0,21	0/0:17,0:16:37.07:0,37,551	1/1:8,4:12:0.10:304,0,0	0/0:19,0:19:57.17:0,57,872	0/0:8,0:8:21.07:0,21,330	1/1:7,4:11:2.42:290,2,0	0/1:7,4:11:8.89:163,0,9	1/1:8,7:15:12.53:459,13,0	0/1:7,2:8:7.28:164,0,7	0/0:4,0:4:11.69:0,12,125	0/0:15,0:15:45.09:0,45,678	0/0:6,0:6:18.06:0,18,291	0/0:8,0:8:18.06:0,18,293	0/0:3,0:3:9.03:0,9,147	0/0:18,0:18:45.13:0,45,682	1/1:9,3:12:19.67:339,20,0	0/1:5,1:6:14.03:95,0,14	0/1:10,1:11:24.48:98,0,24	0/0:3,0:3:9.02:0,9,125	0/0:4,0:4:11.91:0,12,160	0/0:8,0:8:20.60:0,21,326	0/0:3,0:3:6.02:0,6,96
chr10	98335748	.	AAGGG	A	1338.55	PASS	AB=0.836;AC=11;AF=0.204;AN=54;BaseQRankSum=5.189;DP=374;FS=4.785;HRun=0;HaplotypeScore=97.8338;InbreedingCoeff=-0.2097;MQ=81.13;MQ0=9;MQRankSum=-5.671;QD=10.30;ReadPosRankSum=2.075;VQSLOD=2.7233;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:66.21:0,66,1658	0/0:3,0:3:9.03:0,9,215	0/0:43,0:19:23.20:0,23,348	0/0:57,0:26:26.50:0,26,271	./.	0/1:7,3:9:54.71:94,0,55	0/1:13,2:15:50.25:98,0,50	0/0:13,0:12:8.21:0,8,481	0/1:10,3:13:32.36:183,0,32	0/0:17,0:17:51.18:0,51,1344	0/0:8,0:8:21.07:0,21,551	0/1:9,4:13:31.74:179,0,32	0/1:9,4:12:23.86:192,0,24	0/1:10,6:16:14.66:267,0,15	0/1:10,2:11:41.14:85,0,41	0/0:5,0:5:5.20:0,5,117	0/0:14,0:14:39.13:0,39,1022	0/0:6,0:6:18.06:0,18,498	0/0:12,0:12:33.11:0,33,790	0/0:4,0:4:12.03:0,12,285	0/0:18,0:18:44.99:0,45,1119	0/1:11,3:14:3.83:201,0,4	0/1:6,1:7:31.01:86,0,31	0/1:11,1:12:34.51:89,0,35	0/0:3,0:3:9.03:0,9,252	0/1:5,0:5:5.71:6,0,189	0/0:9,0:9:21.54:0,22,556	0/0:5,0:5:11.98:0,12,143
chr10	98335752	.	G	GGA	3783.41	PASS	AB=0.783;AC=25;AF=0.446;AN=56;BaseQRankSum=0.847;DP=391;FS=1.945;HRun=0;HaplotypeScore=79.9306;InbreedingCoeff=0.5519;MQ=81.16;MQ0=10;MQRankSum=-4.380;QD=17.93;ReadPosRankSum=0.935;VQSLOD=3.7534;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:48.12:0,48,559	0/0:4,0:4:5.98:0,6,56	0/1:47,0:21:11.08:11,0,56	0/0:56,0:25:5.51:0,6,49	0/0:1,0:1:3:0,3,26	1/1:8,1:8:12.04:193,12,0	1/1:9,6:15:27.09:435,27,0	1/1:6,5:10:15.05:237,15,0	0/1:8,5:14:1.45:310,0,1	0/0:16,0:16:30.08:0,30,353	0/0:7,0:8:14.88:0,15,159	1/1:9,6:15:24.07:377,24,0	0/1:10,3:12:12.29:313,0,12	1/1:11,8:20:33.11:531,33,0	0/1:9,5:13:25.09:263,0,25	1/1:1,5:6:9.03:145,9,0	0/0:12,0:14:35.76:0,36,379	0/0:7,0:7:15.03:0,15,169	0/0:13,0:13:27.04:0,27,301	0/0:5,0:5:15.02:0,15,157	0/0:19,0:19:30.06:0,30,341	1/1:11,1:12:18.05:259,18,0	0/1:3,3:6:21.33:178,0,21	1/1:6,9:15:17.95:289,18,0	0/0:3,0:3:6.02:0,6,73	1/1:0,5:5:12.04:194,12,0	0/0:9,0:9:8.90:0,9,108	1/1:2,5:8:3.01:48,3,0
chr10	98336079	.	GT	G	892.32	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=7.994;DP=395;FS=12.623;HRun=8;HaplotypeScore=40.8744;InbreedingCoeff=0.7500;MQ=71.64;MQ0=2;MQRankSum=-1.250;QD=14.39;ReadPosRankSum=-0.131;VQSLOD=1.6474;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:54.09:521,54,0	0/0:5,0:5:9.03:0,9,109	0/1:24,0:9:3.76:4,0,25	0/0:17,0:12:20.24:0,20,188	0/0:18,0:18:54.16:0,54,642	0/0:14,0:14:23.21:0,23,390	0/0:8,0:8:21.06:0,21,254	0/0:26,0:26:68.84:0,69,787	0/0:11,0:11:27.07:0,27,314	0/0:16,0:16:42.13:0,42,506	0/0:13,0:13:36.11:0,36,435	0/0:9,0:9:24.07:0,24,290	0/0:9,0:9:24.07:0,24,290	0/0:11,0:11:27.08:0,27,326	0/0:9,0:9:24.06:0,24,278	0/0:6,0:6:12.04:0,12,145	0/0:37,0:37:99:0,105,1253	1/1:0,18:18:51.08:491,51,0	0/0:16,0:18:42.09:0,42,482	0/0:5,0:5:9.03:0,9,109	0/0:7,0:7:15.01:0,15,160	0/0:5,0:5:9.03:0,9,105	0/0:8,0:7:21.06:0,21,253	0/0:11,0:11:27.07:0,27,316	0/0:9,0:9:27.06:0,27,312	0/0:21,0:21:57.16:0,57,669	0/0:15,0:15:42.07:0,42,479	0/0:24,0:24:63.19:0,63,761
chr10	98336277	.	GA	G	1166.52	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.107;DP=537;FS=2.553;HRun=10;HaplotypeScore=54.2299;InbreedingCoeff=0.9155;MQ=76.34;MQ0=2;MQRankSum=-1.623;QD=19.77;ReadPosRankSum=3.031;VQSLOD=4.6139;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,31:35:89.97:781,90,0	0/0:11,0:11:27.07:0,27,299	0/0:22,0:17:25.66:0,26,292	0/0:20,0:19:32.60:0,33,312	0/0:13,0:13:39.11:0,39,431	0/0:18,0:18:54.15:0,54,595	0/0:16,0:16:39.11:0,39,431	0/0:46,0:46:99:0,104,1314	0/0:21,0:21:54.13:0,54,588	0/0:14,0:14:39.08:0,39,416	0/0:14,0:14:42.10:0,42,456	0/0:14,1:15:13.05:0,13,372	0/0:15,0:15:33.09:0,33,365	0/0:19,0:19:51.14:0,51,564	0/0:22,0:22:66.17:0,66,723	0/0:23,0:23:63.09:0,63,657	0/0:24,0:24:51.58:0,52,652	1/1:4,20:24:48.42:506,48,0	0/0:19,0:19:45.11:0,45,488	0/0:17,0:18:47.95:0,48,501	0/0:21,0:21:60.16:0,60,663	0/0:17,0:17:42.11:0,42,464	0/0:9,1:10:4.02:0,4,273	0/0:20,0:20:57.15:0,57,631	0/0:12,0:12:30.07:0,30,325	0/0:13,0:13:39.08:0,39,413	0/0:20,0:20:53.98:0,54,577	0/0:15,0:15:45.12:0,45,498
chr10	98338926	.	G	GA	642.82	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.905;DP=567;FS=4.929;HRun=1;HaplotypeScore=57.4625;InbreedingCoeff=0.9978;MQ=67.63;MQ0=6;MQRankSum=-4.707;QD=22.96;ReadPosRankSum=1.222;VQSLOD=3.6534;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:13:27.09:404,27,0	0/0:12,0:12:33.08:0,33,411	0/0:19,0:14:34.84:0,35,424	0/0:18,0:11:32.60:0,33,364	0/0:22,0:22:63.20:0,63,818	0/0:25,0:25:69.22:0,69,895	0/0:15,0:15:39.13:0,39,506	0/0:27,0:27:78.25:0,78,1013	0/0:19,0:19:57.19:0,57,740	0/0:22,0:22:66.21:0,66,857	0/0:22,0:22:63.20:0,63,817	0/0:27,0:27:78.25:0,78,1012	0/0:22,0:22:63.20:0,63,816	0/0:17,0:17:48.16:0,48,619	0/0:16,0:16:48.16:0,48,623	0/0:19,0:19:54.17:0,54,687	0/0:26,0:26:72.23:0,72,934	1/1:3,11:11:24.08:360,24,0	0/0:20,0:19:57.19:0,57,740	0/0:27,0:27:81.26:0,81,1052	0/0:14,0:13:33.11:0,33,428	0/0:18,0:18:51.17:0,51,662	0/0:14,0:14:39.13:0,39,506	0/0:26,0:26:72.23:0,72,934	0/0:31,0:31:87.28:0,87,1129	0/0:25,0:25:75.24:0,75,973	0/0:24,0:23:69.22:0,69,895	0/0:12,0:12:36.12:0,36,467
chr10	98339288	.	CGTGAGCACCT	C	8100.02	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=12.674;DP=632;FS=217.283;HRun=0;HaplotypeScore=196.1739;InbreedingCoeff=0.9798;MQ=71.86;MQ0=0;MQRankSum=-14.247;QD=52.26;ReadPosRankSum=4.641;VQSLOD=1.2084;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,123,5262	0/0:12,0:12:30.10:0,30,1523	0/0:32,0:29:75.64:0,76,2937	0/0:28,0:24:60.12:0,60,2216	0/0:18,0:18:42.14:0,42,2067	1/1:2,11:13:9.03:286,9,0	1/1:5,16:19:30.10:953,30,0	0/0:29,0:29:72.22:0,72,3124	1/1:6,7:11:9.03:286,9,0	0/0:29,0:29:75.26:0,75,3517	0/0:8,0:8:18.06:0,18,912	1/1:2,11:13:30.10:953,30,0	1/1:2,10:12:27.09:858,27,0	1/1:2,9:11:24.97:764,25,0	1/1:3,19:22:45.15:1429,45,0	0/0:25,0:25:60.21:0,60,2885	0/0:29,0:29:84.29:0,84,4056	0/0:40,0:40:99:0,105,4607	0/0:25,0:25:69.21:0,69,2849	0/0:22,0:22:63.22:0,63,2926	0/0:55,0:55:99:0,151,7350	1/1:3,19:22:36.12:1143,36,0	1/1:2,10:12:21.07:667,21,0	1/1:3,13:14:24.08:762,24,0	0/0:20,0:20:60.21:0,60,2923	0/0:28,0:28:72.25:0,72,3636	0/0:13,0:12:33.11:0,33,1502	0/0:15,0:15:42.09:0,42,1712
chr10	98340094	.	T	TGC	1621	PASS	AB=1.000;AC=25;AF=0.463;AN=54;BaseQRankSum=0.658;DP=302;FS=4.811;HRun=0;HaplotypeScore=55.4918;InbreedingCoeff=0.7530;MQ=82.09;MQ0=1;MQRankSum=-2.374;QD=12.87;ReadPosRankSum=0.673;VQSLOD=2.9960;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:11.91:0,12,50	0/0:7,0:7:14.06:0,14,106	0/0:14,0:13:32.44:0,32,284	0/0:12,0:11:10.31:0,10,171	0/0:5,0:5:8.94:0,9,70	1/1:12,0:12:3.01:32,3,0	1/1:13,0:13:2.90:16,3,0	1/1:15,0:15:41.09:311,41,0	1/1:2,7:9:3.48:53,3,0	0/0:6,0:6:10.83:0,11,87	0/0:7,0:7:20.80:0,21,177	./.	1/1:10,0:10:2.98:22,3,0	1/1:8,0:8:20.71:164,21,0	1/1:8,0:8:17.89:137,18,0	1/1:17,0:17:47.51:524,48,0	0/0:18,0:17:45.02:0,45,458	0/0:11,0:11:11.11:0,11,43	0/0:6,0:6:8.95:0,9,78	0/0:13,0:14:25.78:0,26,210	0/0:15,0:14:24.89:0,25,212	1/1:5,0:5:9.03:133,9,0	1/1:6,0:6:18.02:201,18,0	1/1:11,0:11:3.01:36,3,0	0/0:10,0:10:14.85:0,15,118	0/1:10,0:10:1.01:145,0,1	0/0:24,0:24:53.96:0,54,472	1/1:2,0:2:3.01:41,3,0
chr10	98340095	.	G	GCGC	2034.50	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-0.268;DP=315;FS=4.649;HRun=0;HaplotypeScore=67.5655;InbreedingCoeff=0.7197;MQ=79.14;MQ0=1;MQRankSum=-1.373;QD=13.13;ReadPosRankSum=0.772;VQSLOD=2.5796;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:9.57:0,10,44	0/0:6,0:7:14.10:0,14,113	0/0:14,0:13:35.72:0,36,319	0/0:11,0:10:10.29:0,10,182	0/0:5,0:5:8.94:0,9,70	1/1:1,2:15:2.93:31,3,0	1/1:16,0:16:3.92:14,4,0	1/1:17,0:17:41.09:299,41,0	1/1:9,0:10:3.41:45,3,0	0/0:4,0:5:7.82:0,8,60	0/0:7,0:7:20.80:0,21,185	1/1:3,10:13:0.47:1,0,0	1/1:11,0:11:6.02:104,6,0	1/1:9,0:9:20.76:212,21,0	1/1:9,0:9:17.85:161,18,0	1/1:17,0:17:51:710,51,0	0/0:17,0:17:43.58:0,44,475	0/0:10,0:10:0.81:0,1,19	0/0:3,0:5:9.88:0,10,87	0/0:11,0:14:25.79:0,26,223	0/0:9,0:14:24.89:0,25,218	1/1:5,0:5:9.03:133,9,0	1/1:10,0:10:19.27:204,19,0	1/1:1,10:11:3.01:65,3,0	0/0:11,0:10:14.70:0,15,118	0/1:10,0:10:0.97:204,0,1	0/0:17,0:25:53.99:0,54,519	1/1:2,0:2:3.01:42,3,0
chr10	98340096	.	C	CG	1186.94	PASS	AB=0.702;AC=25;AF=0.446;AN=56;BaseQRankSum=2.686;DP=293;FS=5.912;HRun=1;HaplotypeScore=50.4266;InbreedingCoeff=0.6150;MQ=81.21;MQ0=1;MQRankSum=0.046;QD=8.42;ReadPosRankSum=1.526;VQSLOD=0.9858;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:6.87:0,7,41	0/0:7,0:7:16.18:0,16,137	0/0:15,0:14:35.24:0,35,293	0/0:11,0:10:10.35:0,10,177	0/0:6,0:6:8.94:0,9,71	1/1:11,0:11:3.01:32,3,0	0/1:4,12:16:6.19:34,0,6	1/1:3,1:18:40.52:267,41,0	1/1:9,0:9:2.68:21,3,0	0/0:5,0:5:7.82:0,8,61	0/0:7,0:7:20.80:0,21,175	0/0:12,0:12:0.47:0,0,1	1/1:2,8:10:5.83:35,6,0	1/1:9,0:9:20.62:134,21,0	1/1:9,0:9:17.88:134,18,0	1/1:9,9:18:47.34:370,47,0	0/0:18,0:17:44.99:0,45,439	0/0:3,0:3:2.97:0,3,20	0/1:6,0:6:9.05:9,0,58	0/0:13,0:13:25.73:0,26,197	0/0:15,0:14:24.86:0,25,204	1/1:5,0:5:8.87:58,9,0	1/1:10,0:10:7.84:140,8,0	1/1:10,0:10:2.98:22,3,0	0/0:11,0:10:15.42:0,15,136	0/1:1,2:8:1.45:97,0,1	0/0:24,0:24:53.78:0,54,418	1/1:0,0:2:2.98:22,3,0
chr10	98340097	.	C	CCG	466.95	PASS	AB=0.938;AC=10;AF=0.179;AN=56;BaseQRankSum=2.984;DP=290;FS=17.030;HRun=0;HaplotypeScore=58.6495;InbreedingCoeff=0.5309;MQ=82.45;MQ0=1;MQRankSum=-2.784;QD=7.18;ReadPosRankSum=0.711;VQSLOD=1.6176;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:6.74:0,7,35	0/0:7,0:7:14.38:0,14,107	0/0:17,0:16:34.25:0,34,360	0/0:11,0:10:19.54:0,20,178	0/0:7,0:7:11.96:0,12,97	0/1:11,0:11:0.10:0,0,0	0/0:16,0:16:5.73:0,6,34	1/1:17,0:17:13.44:237,13,0	1/1:9,0:9:2.03:6,2,0	0/0:5,0:5:7.82:0,8,60	0/0:7,0:7:20.91:0,21,183	0/0:11,0:11:0.47:0,0,1	0/0:8,0:8:0.98:0,1,18	0/0:7,0:7:14.46:0,14,112	0/0:8,0:8:17.61:0,18,117	1/1:11,8:19:24.72:303,25,0	0/0:19,0:18:45.02:0,45,464	0/0:3,0:3:2.98:0,3,21	0/0:5,0:5:11.64:0,12,82	0/0:12,0:12:19.81:0,20,160	0/0:15,0:14:21.89:0,22,185	0/0:5,0:5:3.02:0,3,6	0/0:10,0:10:14.86:0,15,82	0/0:10,0:10:2.50:0,2,9	0/0:12,0:11:15.78:0,16,125	0/1:6,1:7:13.58:14,0,34	0/0:24,0:24:53.69:0,54,445	1/1:2,0:2:3.01:41,3,0
chr10	98340710	.	TC	T	324.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.956;DP=551;FS=0.000;HRun=2;HaplotypeScore=77.9990;InbreedingCoeff=0.9852;MQ=76.60;MQ0=0;MQRankSum=-0.284;QD=21.66;ReadPosRankSum=1.387;VQSLOD=3.4993;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.29:0,87,1361	0/0:6,0:6:18.06:0,18,288	0/0:22,0:20:54.13:0,54,771	0/0:19,1:12:24.08:0,24,351	0/0:19,0:19:57.19:0,57,906	0/0:15,0:15:39.12:0,39,599	0/0:14,0:14:39.13:0,39,623	0/0:30,0:30:90.31:0,90,1427	0/0:19,0:19:57.19:0,57,905	0/0:28,0:28:84.29:0,84,1343	0/0:12,0:12:36.12:0,36,573	0/0:19,0:19:57.19:0,57,906	0/0:20,0:20:48.16:0,48,755	0/0:20,0:20:57.19:0,57,909	0/0:12,0:12:36.11:0,36,533	1/1:0,15:15:30.10:419,30,0	0/0:29,0:29:81.26:0,81,1264	0/0:19,0:19:54.18:0,54,859	0/0:24,0:24:72.22:0,72,1117	0/0:16,0:16:48.16:0,48,763	0/0:30,0:30:90.31:0,90,1429	0/0:7,0:7:21.07:0,21,336	0/0:18,0:18:54.18:0,54,860	0/0:21,0:21:63.20:0,63,980	0/0:16,0:16:48.16:0,48,767	0/0:17,0:17:51.17:0,51,812	0/0:37,0:36:99:0,108,1662	0/0:15,0:15:45.15:0,45,711
chr10	98340721	.	GA	G	1706.85	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.406;DP=513;FS=0.510;HRun=9;HaplotypeScore=61.4682;InbreedingCoeff=0.9579;MQ=71.51;MQ0=2;MQRankSum=-0.309;QD=21.07;ReadPosRankSum=0.012;VQSLOD=4.0900;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:66.02:604,66,0	0/0:7,0:7:21.06:0,21,242	0/0:20,0:15:12.95:0,13,223	0/0:17,0:8:5.38:0,5,43	0/0:18,0:18:45.13:0,45,519	0/0:15,0:15:39.11:0,39,447	0/0:13,0:13:36.11:0,36,415	1/1:1,23:24:69.04:631,69,0	0/0:20,0:20:48.13:0,48,543	0/0:27,0:27:69.20:0,69,795	0/0:11,0:11:27.08:0,27,311	0/0:17,0:17:51.15:0,51,588	0/0:18,0:18:45.13:0,45,515	0/0:22,1:23:32.69:0,33,614	0/0:9,0:10:23.89:0,24,244	0/0:15,0:15:36.11:0,36,416	0/0:27,0:27:72.19:0,72,818	1/1:3,16:19:39.02:357,39,0	0/0:28,0:28:78.21:0,78,881	0/0:14,0:14:42.12:0,42,485	0/0:29,0:29:75.22:0,75,866	0/0:8,0:8:21.05:0,21,234	0/0:16,0:16:39.12:0,39,450	0/0:15,0:15:42.12:0,42,485	0/0:18,0:18:48.14:0,48,554	0/0:16,0:16:39.12:0,39,450	0/0:29,0:29:90.07:0,90,1004	1/1:0,10:10:30.02:275,30,0
chr10	98341135	.	TAA	T	2099.86	PASS	AB=0.616;AC=28;AF=0.500;AN=56;BaseQRankSum=2.424;DP=281;FS=10.667;HRun=14;HaplotypeScore=45.9274;InbreedingCoeff=0.7662;MQ=82.05;MQ0=3;MQRankSum=0.040;QD=17.21;ReadPosRankSum=2.117;VQSLOD=1.6603;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:13:20.82:241,21,0	0/0:1,0:2:6.01:0,6,71	0/0:26,0:19:21.88:0,22,283	0/0:14,0:11:4.37:0,4,43	0/0:15,0:16:48.15:0,48,655	1/1:0,12:12:33.04:305,33,0	0/1:3,9:13:10.18:118,0,10	0/1:6,1:12:9.18:9,0,50	1/1:0,5:5:15.02:139,15,0	0/0:9,0:9:24.07:0,24,317	0/0:8,0:9:26.54:0,27,322	1/1:0,9:9:27.03:250,27,0	1/1:1,7:8:15:139,15,0	1/1:0,3:3:6.01:56,6,0	1/1:1,9:10:17.86:213,18,0	1/1:0,3:4:2.90:75,3,0	0/0:9,0:12:26.06:0,26,361	1/1:0,4:4:12.01:111,12,0	0/0:9,0:10:21.05:0,21,256	0/0:8,0:13:36.06:0,36,413	0/0:11,0:10:24.08:0,24,337	1/1:0,5:5:15.02:139,15,0	1/1:1,10:12:32.78:289,33,0	1/1:2,2:4:5.63:55,6,0	0/0:10,0:10:30.10:0,30,421	1/1:2,6:8:20.74:174,21,0	0/0:11,0:16:45.13:0,45,571	0/0:1,0:10:14.97:0,15,52
chr10	98341164	.	C	CA	334.98	PASS	AB=0.957;AC=5;AF=0.089;AN=56;BaseQRankSum=1.897;DP=358;FS=8.499;HRun=8;HaplotypeScore=54.2934;InbreedingCoeff=0.6953;MQ=77.98;MQ0=4;MQRankSum=-1.952;QD=8.82;ReadPosRankSum=1.936;VQSLOD=0.7889;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:51.01:0,51,466	0/0:3,0:3:5.96:0,6,55	0/1:21,1:15:9.23:9,0,174	0/0:16,0:12:4.25:0,4,83	0/0:17,0:17:36:0,36,329	0/0:14,0:14:39.02:0,39,357	0/0:11,0:11:21:0,21,192	0/0:19,0:19:45.02:0,45,411	0/0:9,0:9:27.01:0,27,247	0/0:10,0:10:21:0,21,189	0/0:9,0:9:24.01:0,24,219	0/0:12,0:12:30.01:0,30,274	0/0:7,0:7:21.01:0,21,192	0/0:6,0:6:18.01:0,18,165	0/0:11,0:11:27.01:0,27,247	1/1:0,8:8:21.06:242,21,0	0/0:20,0:20:50.88:0,51,450	0/0:7,0:7:20.97:0,21,184	0/0:18,0:18:39.01:0,39,353	0/0:15,0:15:23.99:0,24,220	0/0:14,0:13:33.01:0,33,302	0/0:5,0:5:15.01:0,15,137	0/0:18,0:18:41.98:0,42,377	0/0:7,0:7:18:0,18,164	0/0:13,0:13:33:0,33,301	1/1:2,6:8:18.05:208,18,0	0/0:20,0:20:57.03:0,57,520	0/0:16,0:16:36.02:0,36,329
chr10	98341826	.	TGTTTTTTTG	T	4420.03	PASS	AB=0.722;AC=19;AF=0.339;AN=56;BaseQRankSum=4.586;DP=473;FS=1.410;HRun=0;HaplotypeScore=163.6978;InbreedingCoeff=0.8890;MQ=74.34;MQ0=4;MQRankSum=-6.882;QD=46.53;ReadPosRankSum=0.354;VQSLOD=4.4570;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:58.21:0,58,700	0/0:9,0:9:27.09:0,27,1046	0/0:36,0:21:58.56:0,59,1232	0/0:34,0:21:18:0,18,495	0/0:25,0:25:75.21:0,75,2519	1/1:7,6:13:38.97:706,39,0	1/1:6,4:10:30:536,30,0	0/0:24,0:24:69.62:0,70,1570	0/1:8,5:13:13.31:529,0,13	0/0:18,0:18:54.15:0,54,1524	0/0:23,0:23:69.22:0,69,2558	1/1:6,3:9:27.05:418,27,0	1/1:9,1:10:27.89:308,28,0	1/1:4,2:6:18:348,18,0	1/1:7,5:12:35.95:558,36,0	0/0:25,0:25:65.79:0,66,1589	0/0:14,0:14:40.36:0,40,1398	0/0:12,0:12:32.94:0,33,403	0/0:18,0:18:54.16:0,54,1838	0/0:25,0:24:72.21:0,72,2479	0/0:10,0:10:27.08:0,27,900	1/1:6,2:8:23.99:364,24,0	1/1:4,5:9:27.04:557,27,0	1/1:5,0:5:11.34:96,11,0	0/0:16,0:16:47.97:0,48,1718	0/0:33,0:33:99:0,99,2404	0/0:31,0:31:90.26:0,90,3111	0/0:0,0:1:3.01:0,3,54
chr10	98341827	.	GT	G	628.68	PASS	AB=1.000;AC=17;AF=0.315;AN=54;BaseQRankSum=8.343;DP=484;FS=0.000;HRun=7;HaplotypeScore=112.4211;InbreedingCoeff=0.5787;MQ=74.40;MQ0=4;MQRankSum=-7.749;QD=5.11;ReadPosRankSum=2.717;VQSLOD=-0.0190;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,12:21:42.07:418,42,0	0/0:9,0:9:27.07:0,27,321	0/0:41,0:23:30.10:0,30,440	0/0:34,1:21:18.25:0,18,204	0/0:25,0:25:62.93:0,63,757	1/1:14,0:14:11.38:35,11,0	0/1:10,0:10:9.63:10,0,14	0/0:24,0:23:44.86:0,45,506	0/1:13,0:13:4.28:4,0,19	0/0:20,0:20:43.01:0,43,508	0/0:24,0:24:66.06:0,66,780	1/1:7,0:7:1.99:6,2,0	0/1:9,0:9:1.26:1,0,20	0/1:7,0:7:3.34:3,0,7	1/1:12,0:12:2.13:9,2,0	0/0:25,0:25:63.17:0,63,738	0/0:14,0:14:36.11:0,36,445	1/1:7,5:12:27.06:273,27,0	0/0:21,0:21:50.95:0,51,591	0/0:26,0:25:59.49:0,59,693	0/0:10,0:10:24.07:0,24,287	0/1:8,0:8:2.28:2,0,9	1/1:9,0:9:9.11:27,9,0	./.	0/0:15,0:15:41.91:0,42,485	0/0:33,0:33:93.29:0,93,1140	0/0:31,0:32:79.74:0,80,962	0/0:1,0:1:2.68:0,3,11
chr10	98341835	.	GT	G	86.26	PASS	AB=1.000;AC=25;AF=0.463;AN=54;BaseQRankSum=9.561;DP=516;FS=1.017;HRun=14;HaplotypeScore=115.4624;InbreedingCoeff=0.4616;MQ=67.85;MQ0=5;MQRankSum=-4.886;QD=0.44;ReadPosRankSum=3.158;VQSLOD=-0.2233;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:19:5.18:25,5,0	0/0:9,1:10:3.28:0,3,160	0/0:58,0:25:6.31:0,6,185	0/0:43,1:19:8.26:0,8,57	0/0:22,0:23:29.10:0,29,383	1/1:15,0:15:11.02:31,11,0	1/1:8,0:8:6.42:17,6,0	0/1:27,0:26:13.15:13,0,16	0/1:13,0:13:5.62:6,0,17	0/0:21,1:23:20.41:0,20,340	0/0:22,6:28:9.60:0,10,353	1/1:6,0:6:1.05:3,1,0	1/1:5,0:5:1.10:4,1,0	1/1:6,0:6:0.76:7,1,0	1/1:10,0:10:0.40:5,0,0	1/1:27,0:27:26.77:65,27,0	0/0:14,0:14:29.69:0,30,257	0/0:12,0:12:3.30:0,3,8	0/0:19,1:20:1.59:0,2,250	0/0:21,2:26:21.43:0,21,419	0/0:10,0:10:18.02:0,18,167	1/1:10,0:10:2.18:6,2,0	1/1:11,0:11:6.80:20,7,0	./.	0/0:14,1:15:17.83:0,18,293	0/1:33,0:33:19.85:40,0,20	0/0:29,3:32:23.65:0,24,474	1/1:4,0:4:2.64:7,3,0
chr10	98341845	.	TTTTTG	T	2731.02	PASS	AB=0.981;AC=30;AF=0.536;AN=56;BaseQRankSum=9.855;DP=564;FS=5.294;HRun=0;HaplotypeScore=149.5610;InbreedingCoeff=0.6385;MQ=70.19;MQ0=7;MQRankSum=-6.061;QD=9.68;ReadPosRankSum=1.297;VQSLOD=2.6323;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:15.42:101,15,0	0/0:10,0:10:30.02:0,30,581	0/0:68,0:26:42.85:0,43,520	0/1:56,0:27:18.51:19,0,163	0/0:22,0:22:60.13:0,60,1322	1/1:13,2:15:10.25:305,10,0	1/1:9,0:9:21.92:218,22,0	0/1:29,0:28:44.60:45,0,153	0/1:11,1:12:24.34:192,0,24	0/0:24,0:24:69.16:0,69,1363	0/0:30,0:30:77.92:0,78,1512	1/1:5,0:5:13.68:104,14,0	1/1:8,0:8:18.87:128,19,0	1/1:10,2:12:5.79:157,6,0	1/1:6,2:8:23.84:207,24,0	1/1:27,0:27:58.74:384,59,0	0/0:15,0:15:38.51:0,39,778	1/1:11,0:11:6.91:46,7,0	0/0:22,0:22:32.59:0,33,1010	0/0:30,0:29:84.11:0,84,1762	0/0:12,0:12:27.02:0,27,574	1/1:9,0:9:8.88:83,9,0	1/1:13,2:15:18.22:219,18,0	1/1:4,0:4:8.94:66,9,0	0/0:16,0:16:44.92:0,45,918	0/1:32,0:32:68.69:535,0,69	0/0:33,0:33:35.34:0,35,1413	1/1:9,0:9:4.34:134,4,0
chr10	98341846	.	TTTTG	T	4076.79	PASS	AB=0.938;AC=30;AF=0.536;AN=56;BaseQRankSum=9.738;DP=557;FS=3.160;HRun=0;HaplotypeScore=133.9429;InbreedingCoeff=0.6921;MQ=70.44;MQ0=6;MQRankSum=-8.579;QD=14.77;ReadPosRankSum=1.091;VQSLOD=3.5084;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:42.64:248,43,0	0/0:10,0:10:30.02:0,30,498	0/0:68,0:26:11.76:0,12,380	0/1:54,0:26:33.55:34,0,137	0/0:23,0:23:62.87:0,63,1100	1/1:11,4:15:24.82:321,25,0	1/1:5,4:9:26.91:255,27,0	0/1:27,0:26:34.18:118,0,34	0/1:8,4:12:20.78:237,0,21	0/0:24,0:24:69.02:0,69,1162	0/0:30,0:30:80.59:0,81,1285	1/1:3,3:6:17.87:151,18,0	1/1:7,1:8:23.71:191,24,0	1/1:11,0:11:28.70:230,29,0	1/1:6,2:8:23.73:194,24,0	1/1:27,0:27:60.10:606,60,0	0/0:15,0:15:37.61:0,38,653	1/1:10,0:10:26.49:147,26,0	0/0:22,0:22:35.46:0,35,855	0/0:30,0:29:87.06:0,87,1456	0/0:11,0:11:27.01:0,27,486	1/1:8,1:9:11.32:82,11,0	1/1:13,2:15:18.37:200,18,0	1/1:3,0:3:8.94:66,9,0	0/0:16,0:16:43.02:0,43,746	0/1:32,0:32:41.26:817,0,41	0/0:32,0:32:35.14:0,35,1133	1/1:9,0:9:23.22:182,23,0
chr10	98341847	.	TTTG	T	5229.84	PASS	AB=0.883;AC=32;AF=0.571;AN=56;BaseQRankSum=9.464;DP=554;FS=1.585;HRun=0;HaplotypeScore=120.1929;InbreedingCoeff=0.7162;MQ=71.20;MQ0=6;MQRankSum=-8.920;QD=15.25;ReadPosRankSum=0.798;VQSLOD=4.8245;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:49.68:432,50,0	0/0:11,0:11:32.99:0,33,434	0/1:67,0:26:17.14:17,0,247	0/1:53,0:25:7.27:7,0,152	0/0:22,0:22:61.19:0,61,889	1/1:15,0:15:42.81:396,43,0	1/1:9,0:9:26.90:239,27,0	1/1:24,3:26:36.81:397,37,0	0/1:12,0:12:10.04:221,0,10	0/0:24,0:24:68.08:0,68,974	0/0:29,0:29:75.63:0,76,1028	1/1:6,0:6:17.74:140,18,0	1/1:8,0:8:23.79:189,24,0	1/1:11,0:11:32.17:249,32,0	1/1:7,1:8:23.39:175,23,0	1/1:0,27:27:60.20:849,60,0	0/0:15,0:15:30.38:0,30,519	1/1:11,0:11:32.78:269,33,0	0/0:21,0:21:35.28:0,35,682	0/0:30,0:29:86.96:0,87,1162	0/0:11,0:11:26.96:0,27,394	1/1:9,0:9:14.71:106,15,0	1/1:14,1:15:18.09:177,18,0	1/1:3,0:3:8.94:66,9,0	0/0:16,0:16:26.74:0,27,589	0/1:4,28:32:15.16:1070,0,15	0/0:32,0:32:37.71:0,38,890	1/1:9,0:9:26.20:230,26,0
chr10	98341848	.	TTG	T	5069.27	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=9.396;DP=555;FS=2.017;HRun=0;HaplotypeScore=112.3369;InbreedingCoeff=0.8071;MQ=71.35;MQ0=6;MQRankSum=-7.647;QD=14.78;ReadPosRankSum=0.561;VQSLOD=4.7566;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,10:20:50.89:510,51,0	0/0:11,0:11:32.71:0,33,341	0/1:64,0:25:74.41:74,0,184	0/1:52,0:25:35.37:35,0,112	0/0:23,0:23:64:0,64,727	1/1:15,0:15:44.78:379,45,0	1/1:10,0:10:29.88:246,30,0	1/1:24,4:27:61.19:585,61,0	1/1:12,0:12:3.73:241,4,0	0/0:23,0:23:66.76:0,67,785	0/0:29,0:29:78.10:0,78,840	1/1:6,0:6:17.47:138,17,0	1/1:10,0:10:29.66:233,30,0	1/1:10,1:11:32.23:250,32,0	1/1:8,0:8:22.99:154,23,0	1/1:27,0:27:60.07:567,60,0	0/0:15,0:15:29.53:0,30,408	1/1:4,7:11:32.98:350,33,0	0/0:22,0:22:36.32:0,36,548	0/0:30,0:29:86.36:0,86,901	0/0:10,0:10:27.02:0,27,313	1/1:9,0:9:14.87:108,15,0	1/1:15,0:15:18.12:149,18,0	1/1:3,0:3:8.94:67,9,0	0/0:16,0:16:26.11:0,26,468	1/1:31,1:32:9.14:750,9,0	0/0:33,0:33:34.57:0,35,649	1/1:9,0:9:26.97:231,27,0
chr10	98341849	.	TG	T	4577.39	PASS	AB=0.978;AC=35;AF=0.625;AN=56;BaseQRankSum=9.651;DP=556;FS=7.508;HRun=1;HaplotypeScore=104.8482;InbreedingCoeff=0.7699;MQ=71.48;MQ0=6;MQRankSum=-7.658;QD=12.14;ReadPosRankSum=0.228;VQSLOD=2.9942;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,2:19:52.99:411,53,0	0/0:11,0:11:31.10:0,31,272	0/1:59,3:24:90.93:91,0,137	0/1:50,1:24:44.91:45,0,79	0/0:22,0:22:63.88:0,64,571	1/1:15,1:16:47.80:380,48,0	1/1:10,0:10:29.79:224,30,0	1/1:27,3:29:72.43:600,72,0	1/1:13,0:13:19.88:262,20,0	0/0:24,0:24:71.42:0,71,667	0/0:30,0:30:78.69:0,79,696	1/1:6,0:6:17.18:128,17,0	1/1:11,0:11:32.76:253,33,0	1/1:11,0:11:32.18:235,32,0	1/1:8,0:8:22.35:134,22,0	1/1:27,0:27:59.66:434,60,0	0/0:15,0:15:28.40:0,28,313	1/1:11,0:11:32.86:254,33,0	0/0:22,0:22:14.42:0,14,406	0/0:30,0:29:83.20:0,83,707	0/0:10,0:10:26.99:0,27,253	1/1:2,7:9:14.88:108,15,0	1/1:5,10:15:17.56:119,18,0	1/1:3,0:3:8.93:66,9,0	0/0:15,0:15:19.38:0,19,362	1/1:32,0:32:29.37:577,29,0	0/1:32,0:32:5.72:6,0,422	1/1:9,1:10:29.94:251,30,0
chr10	98341876	.	GTAAA	G	1130.08	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.660;DP=524;FS=0.000;HRun=0;HaplotypeScore=128.0918;InbreedingCoeff=0.9870;MQ=77.99;MQ0=1;MQRankSum=-5.636;QD=36.45;ReadPosRankSum=-0.248;VQSLOD=3.5343;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:34.01:845,34,0	0/0:12,0:12:36.10:0,36,922	0/0:16,0:14:30.06:0,30,662	0/0:36,0:27:16.04:0,16,1190	0/0:23,0:23:66.23:0,66,1807	0/0:22,0:22:66.15:0,66,1682	0/0:16,0:16:45.08:0,45,1108	0/0:28,0:28:84.28:0,84,2215	0/0:15,0:15:45.15:0,45,1195	0/0:28,0:28:84.28:0,84,2206	0/0:26,0:26:75.25:0,75,1933	0/0:16,0:16:48.16:0,48,1297	0/0:12,0:12:36.11:0,36,871	0/0:14,0:14:42.14:0,42,1116	0/0:10,0:10:27.06:0,27,678	0/0:23,0:23:51.16:0,51,1339	0/0:15,0:15:45.10:0,45,1084	1/1:0,8:8:21.07:406,21,0	0/0:21,0:21:63.22:0,63,1654	0/0:31,0:31:93.31:0,93,2429	0/0:11,0:11:30.09:0,30,736	0/0:19,0:19:51.18:0,51,1393	0/0:17,0:17:29.64:0,30,691	0/0:8,0:8:21.07:0,21,575	0/0:9,0:9:27.09:0,27,740	0/0:31,0:31:93.29:0,93,2377	0/0:18,0:18:51.16:0,51,1272	0/0:11,0:11:30.10:0,30,821
chr10	98342799	.	C	CCCT	1287.67	PASS	AB=0.947;AC=25;AF=0.446;AN=56;BaseQRankSum=8.447;DP=349;FS=23.760;HRun=0;HaplotypeScore=113.2235;InbreedingCoeff=0.4989;MQ=44.87;MQ0=12;MQRankSum=-7.891;QD=8.42;ReadPosRankSum=-0.603;VQSLOD=0.9932;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:2.94:18,3,0	0/0:5,0:5:14.98:0,15,190	0/0:33,0:16:44.78:0,45,590	0/0:43,0:13:25.94:0,26,416	0/0:17,0:17:41.94:0,42,658	0/1:9,1:9:21.47:21,0,51	0/1:18,1:17:7.56:94,0,8	0/1:8,0:4:18.05:18,0,35	0/1:6,1:6:8.09:47,0,8	0/0:11,0:11:21.07:0,21,344	0/0:12,0:12:24.96:0,25,377	1/1:4,2:5:3.48:49,3,0	1/1:3,2:4:6.65:65,7,0	1/1:7,5:11:16.80:197,17,0	1/1:12,5:17:13.76:133,14,0	1/1:10,3:12:0.32:180,0,0	0/0:13,0:13:36.08:0,36,545	0/1:2,0:2:6.87:7,0,12	0/0:15,0:15:39.11:0,39,611	0/0:6,0:6:15.04:0,15,229	0/0:10,0:10:24.08:0,24,408	1/1:9,8:17:12.88:104,13,0	1/1:11,2:13:5.95:68,6,0	0/0:6,2:8:2.43:0,2,18	0/0:9,0:9:23.93:0,24,279	1/1:5,2:8:20.63:260,21,0	0/0:14,0:13:33.10:0,33,537	1/1:2,3:6:3.80:214,4,0
chr10	98342801	.	C	CT	226.88	PASS	AB=0.981;AC=15;AF=0.268;AN=56;BaseQRankSum=8.413;DP=348;FS=14.425;HRun=0;HaplotypeScore=105.9630;InbreedingCoeff=0.2545;MQ=45.18;MQ0=13;MQRankSum=-6.152;QD=1.83;ReadPosRankSum=-4.608;VQSLOD=-0.3679;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:0.47:0,0,1	0/0:5,0:5:14.98:0,15,168	0/0:33,0:17:35.64:0,36,497	0/0:42,1:14:29.03:0,29,327	0/0:16,0:16:42.11:0,42,548	0/0:10,0:9:5.19:0,5,180	0/1:16,1:15:31.01:31,0,61	0/0:7,0:4:11.73:0,12,96	0/1:7,0:6:2.36:2,0,65	0/0:13,0:13:27.07:0,27,339	0/0:12,0:12:27.95:0,28,333	1/1:6,0:5:2:19,2,0	0/1:6,0:4:10.61:11,0,28	0/1:11,1:11:14.70:44,0,15	1/1:17,1:17:10.65:57,11,0	0/1:13,0:12:16.11:36,0,16	0/0:13,0:13:39.09:0,39,491	0/0:2,0:2:6.01:0,6,64	0/0:15,0:15:41.99:0,42,531	0/0:6,0:6:18.03:0,18,216	0/0:10,0:10:24.08:0,24,334	1/1:18,0:18:11.06:58,11,0	1/1:11,2:13:5.91:38,6,0	0/0:8,0:8:2.60:0,3,20	0/0:9,0:9:26.93:0,27,280	0/1:8,0:8:11.26:11,0,32	0/0:14,0:13:36.10:0,36,471	0/1:6,0:6:23.11:77,0,23
chr10	98343403	.	A	AT	4855.23	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-13.213;DP=478;FS=5.184;HRun=8;HaplotypeScore=45.6198;InbreedingCoeff=0.9813;MQ=73.39;MQ0=0;MQRankSum=-0.749;QD=30.16;ReadPosRankSum=1.477;VQSLOD=4.8997;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:41.61:459,42,0	0/0:9,0:9:21:0,21,192	0/0:8,0:8:14.99:0,15,134	0/0:13,0:13:30.01:0,30,274	0/0:33,0:33:84.03:0,84,768	1/1:1,11:12:33.10:381,33,0	1/1:0,9:9:24.07:277,24,0	0/0:24,0:24:63.01:0,63,573	1/1:0,13:13:39.12:450,39,0	0/0:18,0:18:51.03:0,51,467	0/0:27,0:27:78.04:0,78,714	1/1:1,15:16:42.12:485,42,0	1/1:2,14:16:42.12:485,42,0	1/1:1,14:15:42.12:484,42,0	1/1:2,20:22:54.16:623,54,0	0/0:17,0:17:48.03:0,48,439	0/0:29,0:29:87.05:0,87,796	1/1:1,16:17:48.14:554,48,0	0/0:25,0:25:60.03:0,60,549	0/0:21,0:21:54.01:0,54,490	0/0:10,0:10:27:0,27,243	1/1:2,2:4:6.02:69,6,0	1/1:0,11:11:27.08:311,27,0	1/1:1,8:9:24.07:277,24,0	0/0:24,0:24:63.03:0,63,577	0/0:22,0:22:63.03:0,63,577	0/0:26,0:26:75.02:0,75,681	0/0:11,0:11:24.01:0,24,220
chr10	98344488	.	T	TCCC	1036.09	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.304;DP=621;FS=4.082;HRun=4;HaplotypeScore=88.7263;InbreedingCoeff=0.9828;MQ=75.66;MQ0=0;MQRankSum=0.156;QD=26.57;ReadPosRankSum=0.065;VQSLOD=0.5053;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:26:33.03:621,33,0	0/0:9,0:9:21.07:0,21,315	0/0:27,0:24:45.13:0,45,738	0/0:31,0:25:48.13:0,48,708	0/0:11,0:11:24.06:0,24,345	0/0:19,0:19:47.52:0,48,696	0/0:34,0:34:96.25:0,96,1396	0/0:27,0:27:66.21:0,66,965	0/0:21,0:21:57.16:0,57,845	0/0:16,0:16:42.12:0,42,577	0/0:8,0:8:15.05:0,15,230	0/0:35,0:35:96.32:0,96,1470	0/0:24,0:24:63.21:0,63,960	0/0:20,0:20:60.20:0,60,919	0/0:29,0:29:72.22:0,72,1079	0/0:24,0:24:69.20:0,69,996	0/0:34,0:34:87.25:0,87,1276	1/1:2,11:13:24.08:536,24,0	0/0:19,0:19:54.18:0,54,805	0/0:9,0:9:18:0,18,208	0/0:37,0:37:99:0,111,1668	0/0:18,0:18:33.04:0,33,478	0/0:11,0:11:27.06:0,27,358	0/0:36,0:36:93.29:0,93,1397	0/0:20,0:20:39.10:0,39,679	0/0:20,0:20:54.17:0,54,804	0/0:27,0:27:75.24:0,75,1113	0/0:16,0:16:48.15:0,48,713
chr10	98345845	.	TTGCCGC	T	306.78	PASS	AC=4;AF=0.080;AN=50;BaseQRankSum=3.994;DP=537;FS=1.496;HRun=0;HaplotypeScore=105.2502;InbreedingCoeff=0.6852;MQ=74.29;MQ0=0;MQRankSum=-4.417;QD=5.90;ReadPosRankSum=-1.671;VQSLOD=2.1256;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,6:29:6.02:127,6,0	0/0:8,0:8:9.03:0,9,298	0/0:17,0:14:11.87:0,12,292	0/0:17,0:17:17.65:0,18,404	0/0:19,0:19:3.01:0,3,100	0/0:20,0:20:24.06:0,24,634	0/0:21,0:21:57.15:0,57,1725	0/0:26,0:26:18.05:0,18,446	0/0:24,0:24:48.14:0,48,1436	0/0:13,0:13:7.23:0,7,123	./.	0/0:23,0:23:60.21:0,60,1974	0/0:23,0:23:51.02:0,51,1337	0/0:31,0:31:72.08:0,72,1902	0/0:20,0:20:54.13:0,54,1598	0/0:19,0:19:33.10:0,33,1017	0/0:30,0:30:72.21:0,72,2161	1/1:10,13:23:15.05:285,15,0	0/0:20,0:20:16.26:0,16,350	./.	0/0:33,0:33:45.13:0,45,1301	0/0:18,0:18:5.99:0,6,120	./.	0/0:27,0:27:60.18:0,60,1843	0/0:18,0:18:6.02:0,6,172	0/0:14,0:13:15.03:0,15,347	0/0:11,0:11:21.07:0,21,693	0/0:13,0:13:21.02:0,21,491
chr10	98347197	.	CT	C	4834.43	PASS	AB=0.682;AC=30;AF=0.536;AN=56;BaseQRankSum=6.749;DP=534;FS=13.304;HRun=11;HaplotypeScore=54.9147;InbreedingCoeff=0.7003;MQ=63.34;MQ0=6;MQRankSum=0.810;QD=13.93;ReadPosRankSum=3.119;VQSLOD=3.6429;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:9,31:40:9.11:619,0,9	0/0:8,0:8:12.03:0,12,128	0/0:12,0:9:17.95:0,18,162	0/1:14,1:9:18.47:19,0,18	0/0:23,0:22:39.08:0,39,402	0/1:5,11:16:27.38:210,0,27	1/1:5,15:19:38.94:320,39,0	1/1:4,22:28:69.17:525,69,0	1/1:8,13:21:26.95:222,27,0	0/0:13,0:13:21.05:0,21,220	0/0:9,0:9:18.05:0,18,192	1/1:6,11:16:20.95:172,21,0	0/1:6,8:14:9.88:127,0,10	1/1:7,13:20:15.64:272,16,0	1/1:1,13:14:35.95:295,36,0	1/1:1,8:9:17.97:147,18,0	0/0:27,0:28:66.10:0,66,679	1/1:7,29:36:33.92:483,34,0	0/0:19,0:20:38.85:0,39,379	0/0:9,0:16:47.21:0,47,393	0/0:17,1:18:11.45:0,11,327	1/1:3,13:16:29.96:246,30,0	1/1:2,17:19:38.65:320,39,0	1/1:4,23:27:30.93:460,31,0	0/0:19,0:20:20.27:0,20,391	1/1:5,14:19:41.90:342,42,0	0/0:18,0:16:14.43:0,14,299	1/1:5,9:14:8.02:55,8,0
chr10	98348968	.	CGTCTG	C	17498.48	PASS	AB=0.571;AC=31;AF=0.554;AN=56;BaseQRankSum=16.350;DP=675;FS=2.212;HRun=0;HaplotypeScore=139.0210;InbreedingCoeff=0.9253;MQ=87.11;MQ0=0;MQRankSum=-12.576;QD=43.53;ReadPosRankSum=3.729;VQSLOD=5.2504;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,41:48:99:2003,99,0	0/0:7,0:7:15.05:0,15,442	0/0:32,0:32:85.17:0,85,2369	0/0:21,0:21:51.17:0,51,1404	0/0:18,0:18:42.14:0,42,1124	1/1:3,18:21:45.15:913,45,0	1/1:3,27:30:75.26:1521,75,0	1/1:10,18:28:57.17:1060,57,0	1/1:0,14:14:33.11:670,33,0	0/0:23,0:23:63.21:0,63,1803	0/0:13,0:13:36.12:0,36,1086	1/1:2,18:20:48.12:933,48,0	1/1:5,23:28:54.22:1096,54,0	1/1:1,21:22:57.20:1157,57,0	1/1:4,12:16:30.10:609,30,0	1/1:6,28:34:69.24:1401,69,0	0/0:28,0:28:81.28:0,81,2421	1/1:1,20:21:54.19:1095,54,0	0/0:22,0:22:54.17:0,54,1531	0/0:25,0:25:57.20:0,57,1673	0/0:23,0:23:63.22:0,63,1877	1/1:2,24:26:60.21:1217,60,0	1/1:4,19:23:48.11:974,48,0	1/1:6,28:34:66.23:1340,66,0	0/0:26,0:26:66.23:0,66,1998	0/1:6,18:24:99:900,0,125	0/0:35,0:35:99:0,99,2937	1/1:2,11:13:30.10:609,30,0
chr10	98350043	.	TAC	T	3478.68	PASS	AB=0.849;AC=28;AF=0.519;AN=54;BaseQRankSum=4.898;DP=704;FS=1.002;HRun=0;HaplotypeScore=99.6965;InbreedingCoeff=-0.0369;MQ=60.96;MQ0=14;MQRankSum=-0.199;QD=6.69;ReadPosRankSum=2.256;VQSLOD=2.8992;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,16:39:12.18:278,0,12	0/1:5,1:10:21.03:21,0,104	0/0:28,0:8:0:0,0,0	0/0:27,0:7:0:0,0,0	0/1:21,2:24:53.17:53,0,258	1/1:14,7:22:5.23:134,5,0	1/1:11,9:21:20.89:212,21,0	0/1:30,0:28:20.40:38,0,20	1/1:10,13:27:35.73:302,36,0	0/0:17,0:16:24.43:0,24,254	0/1:29,0:29:44.27:44,0,269	1/1:12,9:22:17.78:179,18,0	1/1:12,5:19:20.03:173,20,0	1/1:9,14:26:32.67:328,33,0	1/1:14,12:31:50.19:473,50,0	0/0:16,0:27:23.98:0,24,205	0/0:25,4:28:0.36:0,0,432	0/1:14,10:24:15.41:185,0,15	./.	0/1:18,1:19:34.02:34,0,303	0/1:45,5:52:99:191,0,285	1/1:11,8:24:26.08:231,26,0	0/1:13,1:15:10.87:72,0,11	0/1:24,15:43:23.24:347,0,23	0/1:23,1:23:25.77:26,0,210	0/0:10,0:23:7.78:0,8,140	0/0:23,1:25:3.10:0,3,354	0/1:6,9:15:49.15:155,0,49
chr10	98350534	.	GTATT	G	1004.61	PASS	AB=0.854;AC=25;AF=0.521;AN=48;BaseQRankSum=4.993;DP=313;FS=0.886;HRun=0;HaplotypeScore=51.8660;InbreedingCoeff=0.4378;MQ=64.17;MQ0=2;MQRankSum=-1.446;QD=6.05;ReadPosRankSum=1.169;VQSLOD=1.6584;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:11:6.02:0,6,109	0/0:8,0:8:9.03:0,9,211	./.	./.	0/0:16,0:16:9.03:0,9,211	1/1:5,0:12:11.60:91,12,0	1/1:3,2:5:3.01:46,3,0	1/1:37,0:37:1.82:5,2,0	./.	0/0:13,0:13:6.02:0,6,141	0/0:10,0:10:3.01:0,3,70	1/1:3,3:6:5.98:66,6,0	1/1:6,4:10:9.03:139,9,0	1/1:2,2:4:6.02:93,6,0	1/1:4,2:6:6.02:93,6,0	0/0:7,0:10:12.04:0,12,205	0/0:22,0:22:30.10:0,30,672	0/1:10,6:16:17.75:257,0,18	0/1:16,4:19:55.31:150,0,55	0/0:13,0:13:9.03:0,9,207	./.	1/1:4,1:5:2.97:20,3,0	1/1:3,2:5:3.01:46,3,0	1/1:3,1:4:3.01:46,3,0	0/1:14,0:14:35:35,0,132	0/0:15,0:15:12.03:0,12,238	0/0:12,0:12:12.04:0,12,262	1/1:18,0:22:11.55:81,12,0
chr10	98350872	.	C	CT	568.74	PASS	AB=0.871;AC=8;AF=0.143;AN=56;BaseQRankSum=-4.573;DP=532;FS=14.235;HRun=12;HaplotypeScore=60.5096;InbreedingCoeff=0.0919;MQ=66.83;MQ0=0;MQRankSum=-0.804;QD=4.09;ReadPosRankSum=0.035;VQSLOD=-0.0442;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:21:33.59:0,34,283	0/0:8,0:8:20.88:0,21,153	0/0:8,0:9:8.59:0,9,53	0/1:12,0:12:2.61:3,0,93	0/0:22,0:22:41.65:0,42,303	0/1:19,2:24:8.26:8,0,251	0/0:16,1:19:4.68:0,5,179	0/0:36,0:38:58.36:0,58,571	0/0:16,0:16:38.77:0,39,285	0/0:18,1:21:7.63:0,8,200	0/0:21,0:21:19.13:0,19,280	0/0:14,0:14:32.80:0,33,241	0/0:25,0:25:27.01:0,27,319	0/0:20,2:22:5.58:0,6,195	0/0:20,0:21:37.71:0,38,268	1/1:3,10:13:11.14:270,11,0	0/0:26,1:29:13.58:0,14,245	0/1:13,1:14:8.54:9,0,187	0/1:21,4:27:56:56,0,277	0/0:20,0:20:23.61:0,24,175	0/0:5,0:5:8.93:0,9,65	0/0:6,0:6:14.90:0,15,109	0/0:16,2:18:9.52:0,10,233	0/0:17,0:18:37.78:0,38,268	0/0:8,0:9:25.14:0,25,166	0/1:9,15:24:90.28:341,0,90	0/0:30,1:29:40.61:0,41,471	0/1:20,3:23:7.76:8,0,278
chr10	98351217	.	C	CATCT	7872.21	PASS	AB=0.898;AC=25;AF=0.500;AN=50;BaseQRankSum=-8.176;DP=718;FS=0.957;HRun=0;HaplotypeScore=118.9256;InbreedingCoeff=0.7384;MQ=68.88;MQ0=6;MQRankSum=-0.796;QD=21.22;ReadPosRankSum=-3.366;VQSLOD=4.0614;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,14:34:3.89:869,0,4	0/0:10,0:10:12.04:0,12,184	./.	./.	0/0:27,0:27:42.12:0,42,621	1/1:16,15:33:42.14:982,42,0	1/1:7,3:12:6.02:140,6,0	./.	1/1:11,13:24:18.06:421,18,0	0/0:15,0:15:15.05:0,15,231	0/0:19,0:19:36.11:0,36,531	1/1:7,11:18:21.07:491,21,0	1/1:11,12:25:36.12:837,36,0	1/1:20,12:32:36.12:841,36,0	1/1:15,19:36:33.11:759,33,0	1/1:12,3:26:9.03:156,9,0	0/0:17,0:17:21.47:0,21,491	0/1:10,0:21:40.07:40,0,189	0/0:32,0:32:9.03:0,9,138	0/0:28,0:28:42.14:0,42,640	0/0:17,0:17:27.09:0,27,415	1/1:13,13:27:27.09:632,27,0	1/1:15,14:31:30.08:702,30,0	1/1:9,9:19:24.01:509,24,0	0/0:35,0:35:69.23:0,69,1054	0/1:32,0:32:41.57:493,0,42	0/0:32,0:32:57.19:0,57,876	0/0:16,0:27:21.02:0,21,196
chr10	98352753	.	C	CT	773.21	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.708;DP=547;FS=5.379;HRun=10;HaplotypeScore=60.6677;InbreedingCoeff=0.9352;MQ=75.35;MQ0=0;MQRankSum=-0.885;QD=20.35;ReadPosRankSum=-3.663;VQSLOD=3.2262;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:86.35:0,86,755	0/0:9,0:9:23.95:0,24,194	0/0:12,0:13:17.54:0,18,120	0/0:11,0:11:8.24:0,8,84	0/0:23,0:24:46.95:0,47,375	0/0:19,0:19:50.94:0,51,419	0/0:15,0:15:35.94:0,36,293	1/1:6,23:29:60.15:640,60,0	0/0:20,0:20:50.93:0,51,419	0/0:28,0:28:45.49:0,45,538	0/0:17,0:17:41.92:0,42,343	0/0:21,1:24:26.97:0,27,417	0/0:15,0:15:38.95:0,39,320	0/0:16,0:19:51.06:0,51,387	0/0:9,0:9:26.97:0,27,222	0/0:19,0:19:44.91:0,45,369	0/0:17,0:20:39.02:0,39,289	0/0:16,0:16:44.91:0,45,363	0/0:21,1:22:9.93:0,10,285	0/0:21,1:23:29.93:0,30,436	0/0:15,0:15:32.65:0,33,290	0/0:16,0:16:38.95:0,39,320	0/0:21,0:21:56.89:0,57,467	0/0:19,0:21:52.98:0,53,425	0/0:20,0:21:55.96:0,56,449	0/0:33,1:36:55.96:0,56,645	0/0:19,0:19:50.92:0,51,419	1/1:0,9:9:24.06:254,24,0
chr10	98353494	.	TG	T	5527.40	PASS	AB=0.889;AC=21;AF=0.375;AN=56;BaseQRankSum=8.780;DP=649;FS=30.138;HRun=9;HaplotypeScore=68.2686;InbreedingCoeff=0.9244;MQ=72.76;MQ0=0;MQRankSum=-1.917;QD=21.10;ReadPosRankSum=2.620;VQSLOD=3.4817;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.23:0,78,900	0/0:10,0:10:24.07:0,24,277	0/0:16,0:16:41.72:0,42,436	0/0:8,0:7:14.94:0,15,153	0/0:19,0:19:51.13:0,51,577	1/1:2,22:24:60.03:549,60,0	1/1:4,20:24:48.02:439,48,0	0/0:21,0:21:39.08:0,39,422	1/1:3,16:19:48.02:439,48,0	0/0:28,0:28:66.13:0,66,729	0/0:16,0:16:45.12:0,45,509	1/1:3,21:24:69.04:630,69,0	1/1:2,18:20:54.03:494,54,0	1/1:4,23:27:63.02:576,63,0	1/1:9,30:39:96.04:877,96,0	0/0:6,1:26:26.56:0,27,243	0/0:35,2:37:22.65:0,23,774	0/0:27,0:27:63.19:0,63,727	0/1:14,2:16:12.59:13,0,373	0/0:20,0:20:48.14:0,48,554	0/0:29,1:30:47.76:0,48,803	1/1:3,18:21:51.03:466,51,0	1/1:2,17:19:48.02:439,48,0	1/1:5,24:29:65.65:604,66,0	0/0:30,0:31:78.06:0,78,880	0/0:26,1:27:35.71:0,36,656	0/0:33,0:33:84.23:0,84,958	0/0:11,0:11:33.10:0,33,381
chr10	98356321	.	T	TGAGA	1924.78	PASS	AB=0.952;AC=30;AF=0.682;AN=44;BaseQRankSum=-0.377;DP=509;FS=32.019;HRun=0;HaplotypeScore=130.0281;InbreedingCoeff=0.2739;MQ=62.10;MQ0=5;MQRankSum=-1.231;QD=5.66;ReadPosRankSum=0.687;VQSLOD=0.4665;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:9.02:134,9,0	./.	./.	./.	0/0:27,0:27:6.95:0,7,93	1/1:23,0:23:18.01:230,18,0	1/1:22,0:22:9.50:133,9,0	1/1:36,0:36:12.98:175,13,0	1/1:14,0:13:3.01:69,3,0	0/0:24,0:23:4.55:0,5,65	./.	1/1:16,0:16:6.16:84,6,0	1/1:19,0:19:12.02:153,12,0	1/1:10,0:10:2.99:23,3,0	1/1:13,9:25:14.42:318,14,0	1/1:15,0:15:6.02:119,6,0	0/1:25,0:26:47.95:48,0,88	0/0:6,0:9:7.56:0,8,60	0/1:12,0:12:8.14:8,0,39	0/0:14,0:14:0.93:0,1,2	1/1:18,0:17:6:67,6,0	0/0:18,0:18:0.47:0,0,1	./.	1/1:25,0:25:12.01:163,12,0	0/1:17,0:17:18.74:19,0,40	1/1:22,0:22:17.47:186,17,0	0/1:17,0:19:22.58:133,0,23	./.
chr10	98358277	.	CTGCA	C	20801.07	PASS	AB=0.525;AC=31;AF=0.554;AN=56;BaseQRankSum=15.815;DP=784;FS=1.921;HRun=0;HaplotypeScore=143.7725;InbreedingCoeff=0.9269;MQ=88.77;MQ0=1;MQRankSum=-7.374;QD=44.73;ReadPosRankSum=5.652;VQSLOD=5.4450;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,38:41:99:1847,99,0	0/0:8,0:8:24.08:0,24,640	0/0:29,0:29:87.30:0,87,2185	0/0:32,0:32:82.86:0,83,1829	0/0:29,0:29:81.28:0,81,2159	1/1:3,35:37:90.31:1680,90,0	1/1:3,19:22:42.14:784,42,0	1/1:6,26:32:78.27:1449,78,0	1/1:4,27:31:78.27:1455,78,0	0/0:30,0:30:84.29:0,84,2217	0/0:17,0:17:51.18:0,51,1360	1/1:2,24:26:63.22:1176,63,0	1/1:1,35:36:93.32:1735,93,0	1/1:2,26:28:66.23:1231,66,0	1/1:1,32:33:87.30:1623,87,0	1/1:2,33:35:81.11:1511,81,0	0/0:32,0:32:90.31:0,90,2386	1/1:3,14:17:33.11:616,33,0	0/0:20,0:20:60.21:0,60,1591	0/0:28,0:28:81.26:0,81,2059	0/0:44,0:44:99:0,129,3393	1/1:2,26:28:57.15:1028,57,0	1/1:2,22:24:60.21:1119,60,0	1/1:2,33:35:90.31:1680,90,0	0/0:22,0:22:60.18:0,60,1453	0/1:3,28:31:69.81:1478,0,70	0/0:28,0:27:72.25:0,72,1918	1/1:0,8:8:21.07:392,21,0
chr10	98359217	.	GGTGT	G	1905.87	PASS	AB=0.929;AC=32;AF=0.593;AN=54;BaseQRankSum=6.624;DP=635;FS=0.000;HRun=0;HaplotypeScore=120.0139;InbreedingCoeff=0.5857;MQ=69.98;MQ0=12;MQRankSum=-1.298;QD=5.14;ReadPosRankSum=3.511;VQSLOD=2.1800;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:25:3:28,3,0	0/0:4,0:4:5.72:0,6,97	./.	0/0:25,0:17:0:0,0,0	0/0:23,0:29:9.01:0,9,129	1/1:15,8:24:2.43:154,2,0	1/1:19,3:22:18.48:232,18,0	0/0:29,0:28:2.77:0,3,13	1/1:14,4:18:6.02:93,6,0	0/0:27,0:27:19.31:0,19,375	0/1:13,0:13:15.55:16,0,230	1/1:16,7:22:6.32:94,6,0	1/1:20,5:24:6.01:74,6,0	1/1:14,0:25:15.02:139,15,0	1/1:10,10:20:11.77:186,12,0	1/1:15,0:27:35.53:307,36,0	0/1:30,1:36:32.69:33,0,599	1/1:11,0:17:6.01:56,6,0	0/0:15,0:15:15.03:0,15,212	0/0:19,0:23:38.27:0,38,640	0/0:31,0:31:26.98:0,27,419	1/1:14,10:24:17.04:212,17,0	1/1:11,0:14:3:30,3,0	1/1:13,13:25:21.07:324,21,0	0/0:21,0:22:41.79:0,42,718	1/1:16,0:23:9.01:84,9,0	0/0:18,0:21:14.83:0,15,191	1/1:5,0:6:3:28,3,0
chr10	98359619	.	G	GA	1035	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.027;DP=668;FS=9.372;HRun=0;HaplotypeScore=108.2580;InbreedingCoeff=0.9944;MQ=75.55;MQ0=0;MQRankSum=-1.730;QD=25.24;ReadPosRankSum=-2.854;VQSLOD=2.7729;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:60.17:0,60,692	0/0:12,0:12:36.09:0,36,450	0/0:30,0:29:64.07:0,64,852	0/0:16,0:15:16.98:0,17,429	0/0:39,0:39:99:0,117,1599	0/0:25,0:25:57.16:0,57,648	0/0:18,0:18:39.02:0,39,418	1/1:6,20:26:58.47:718,58,0	0/0:24,0:24:54.14:0,54,603	0/0:23,0:23:69.21:0,69,914	0/0:16,0:16:48.14:0,48,630	0/0:28,0:28:75.10:0,75,812	0/0:13,0:13:35.84:0,36,389	0/0:28,0:28:72.18:0,72,821	0/0:33,0:33:87.18:0,87,980	0/0:20,0:20:57.18:0,57,778	0/0:29,0:29:87.25:0,87,1164	0/0:26,0:26:72.18:0,72,799	0/0:28,0:28:78.24:0,78,1058	0/0:23,0:23:69.19:0,69,896	0/0:22,0:22:66.20:0,66,903	0/0:36,0:36:99:0,105,1216	0/0:23,0:23:57.14:0,57,645	0/0:19,0:19:48.14:0,48,568	0/0:18,0:18:54.16:0,54,721	0/0:23,0:23:69.19:0,69,890	0/0:32,0:32:93.20:0,93,1191	1/1:4,11:15:32.51:439,33,0
chr10	98359620	.	GA	G	7888.79	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=9.349;DP=660;FS=2.133;HRun=5;HaplotypeScore=83.0070;InbreedingCoeff=0.9998;MQ=75.72;MQ0=0;MQRankSum=-2.494;QD=27.11;ReadPosRankSum=6.414;VQSLOD=4.3872;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:22:51.14:577,51,0	0/0:12,0:12:33.09:0,33,415	0/0:30,0:29:56.73:0,57,793	0/0:16,0:15:33.83:0,34,358	0/0:39,0:39:99:0,117,1533	1/1:1,24:25:54.15:611,54,0	1/1:1,15:16:30.09:338,30,0	0/0:25,0:26:66.88:0,67,365	1/1:1,22:23:51.15:577,51,0	0/0:23,0:23:63.20:0,63,827	0/0:16,0:16:45.12:0,45,575	1/1:0,27:27:72.20:810,72,0	1/1:1,12:13:33.09:365,33,0	1/1:1,27:28:69.20:781,69,0	1/1:2,31:33:81.23:914,81,0	0/0:19,0:19:54.16:0,54,701	0/0:29,0:29:87.25:0,87,1131	1/1:0,25:25:69.20:780,69,0	0/0:28,0:28:84.25:0,84,1083	0/0:23,0:23:66.18:0,66,833	0/0:22,0:22:66.21:0,66,878	1/1:3,33:36:93.26:1049,93,0	1/1:0,23:23:56.78:644,57,0	1/1:3,16:19:39.11:441,39,0	0/0:18,0:18:54.16:0,54,702	0/0:21,0:21:57.18:0,57,759	0/0:32,0:32:93.19:0,93,1141	0/0:15,0:15:39.98:0,40,218
chr10	98360782	.	TAAG	T	12991.20	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=20.580;DP=819;FS=0.000;HRun=0;HaplotypeScore=142.5177;InbreedingCoeff=1.0000;MQ=86.70;MQ0=0;MQRankSum=-6.491;QD=44.19;ReadPosRankSum=3.965;VQSLOD=6.0004;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,2376	0/0:12,0:12:36.12:0,36,830	0/0:40,0:40:99:0,106,2117	0/0:19,0:19:36.18:0,36,911	0/0:25,0:25:72.23:0,72,1591	1/1:0,22:22:60.21:1021,60,0	1/1:0,33:33:90.31:1531,90,0	0/0:28,0:28:75.24:0,75,1644	1/1:1,26:27:50.19:1167,50,0	0/0:37,0:37:99:0,111,2426	0/0:20,0:20:54.19:0,54,1225	1/1:0,23:23:66.23:1124,66,0	1/1:1,44:45:99:2091,123,0	1/1:1,24:25:63.15:1039,63,0	1/1:0,43:43:99:1940,114,0	0/0:37,0:37:99:0,111,2527	0/0:32,0:32:90.27:0,90,1975	0/0:22,0:22:66.20:0,66,1445	0/0:30,0:29:90.31:0,90,2024	0/0:33,0:33:96.33:0,96,2209	0/0:45,0:45:99:0,132,2925	1/1:1,19:21:48.12:786,48,0	1/1:3,27:30:75.21:1246,75,0	1/1:0,25:25:63.65:1044,64,0	0/0:23,0:23:69.22:0,69,1544	0/0:37,0:37:99:0,111,2398	0/0:31,0:31:90.31:0,90,2064	0/0:19,0:19:57.20:0,57,1311
chr10	98360874	.	GTCTGTCTC	G	12885.42	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=12.535;DP=771;FS=9.395;HRun=0;HaplotypeScore=205.1857;InbreedingCoeff=0.9984;MQ=64.85;MQ0=3;MQRankSum=-12.866;QD=49.94;ReadPosRankSum=0.719;VQSLOD=3.8450;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,162,5644	0/0:12,0:12:36.12:0,36,1289	0/0:39,0:29:63.07:0,63,1533	0/0:34,0:28:37.23:0,37,802	0/0:36,0:36:99:0,105,3738	1/1:5,14:19:45.15:1190,45,0	1/1:2,19:21:24.01:553,24,0	0/0:22,0:22:48.12:0,48,1280	1/1:13,9:22:29.12:1085,29,0	0/0:25,0:25:69.22:0,69,2511	0/0:11,0:11:33.05:0,33,981	1/1:11,21:32:87.28:2146,87,0	1/1:11,10:21:51.12:1235,51,0	1/1:12,21:33:69.22:1742,69,0	1/1:24,22:46:99:2162,102,0	0/0:37,0:37:99:0,105,4172	0/0:30,0:30:84.21:0,84,3069	0/0:17,0:17:48.10:0,48,1778	0/0:24,0:24:53.83:0,54,1743	0/0:28,0:28:81.24:0,81,2807	0/0:42,0:42:99:0,111,4302	1/1:12,16:28:66.12:1405,66,0	1/1:0,15:15:18.53:491,19,0	1/1:14,7:21:42.11:877,42,0	0/0:25,0:25:69.22:0,69,2712	0/0:30,0:30:84.25:0,84,2922	0/0:27,0:26:57.25:0,57,2850	0/0:16,0:16:42.13:0,42,1551
chr10	98361571	.	GTT	G	2508.86	PASS	AB=0.994;AC=34;AF=0.654;AN=52;BaseQRankSum=-0.888;DP=555;FS=5.442;HRun=3;HaplotypeScore=121.8054;InbreedingCoeff=0.0394;MQ=44.14;MQ0=71;MQRankSum=9.155;QD=5.25;ReadPosRankSum=6.131;VQSLOD=0.0359;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:37:12.79:330,13,0	1/1:6,0:5:6.90:49,7,0	./.	./.	0/1:18,0:15:13.69:14,0,114	1/1:24,0:20:23.15:142,23,0	0/1:25,0:22:17.40:68,0,17	0/0:22,0:20:14.62:0,15,166	1/1:23,0:22:22.24:181,22,0	0/1:19,0:12:26.76:27,0,127	0/1:12,0:11:0.31:24,0,0	0/1:26,0:24:18.69:116,0,19	1/1:18,0:17:30.15:168,30,0	1/1:21,0:18:16.10:162,16,0	1/1:13,0:12:16.35:103,16,0	1/1:34,0:30:44.79:390,45,0	0/0:25,0:21:3.33:0,3,170	1/1:20,0:15:5.38:195,5,0	0/0:13,0:10:8.84:0,9,67	0/1:28,0:26:21.88:22,0,180	0/1:43,0:38:81.25:81,0,92	1/1:14,0:13:4.64:58,5,0	0/0:8,9:14:3.99:0,4,14	1/1:30,0:29:39.82:217,40,0	0/1:12,0:11:33.02:38,0,33	0/1:25,0:19:18.91:226,0,19	0/1:15,1:15:42.02:42,0,191	1/1:9,0:1:2.96:19,3,0
chr10	98361573	.	TTG	T	1206.05	PASS	AB=0.952;AC=27;AF=0.540;AN=50;BaseQRankSum=-1.459;DP=555;FS=0.798;HRun=0;HaplotypeScore=128.6409;InbreedingCoeff=0.1899;MQ=43.96;MQ0=72;MQRankSum=1.238;QD=2.84;ReadPosRankSum=-0.100;VQSLOD=2.3534;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:37:20.90:151,21,0	0/0:6,0:5:3.84:0,4,13	./.	./.	0/0:18,0:15:6.29:0,6,66	1/1:24,0:20:17.22:159,17,0	1/1:25,1:23:10.11:70,10,0	0/0:23,0:21:5.88:0,6,36	0/1:22,0:21:9.23:155,0,9	0/0:20,0:13:22.80:0,23,196	0/0:12,0:11:2.65:0,3,14	0/1:16,11:25:33.27:34,0,33	1/1:18,0:17:9.24:212,9,0	1/1:21,0:18:4.56:50,5,0	1/1:13,0:12:8.64:94,9,0	1/1:33,0:29:1.50:32,2,0	0/1:23,0:19:16.80:17,0,119	0/1:20,1:16:31.18:68,0,31	0/0:14,0:11:2.97:0,3,20	0/1:27,0:25:10.30:10,0,120	0/1:43,0:38:14.86:15,0,100	1/1:14,0:13:7.70:51,8,0	0/0:16,0:13:2.82:0,3,34	1/1:29,0:28:20.85:226,21,0	0/0:12,0:11:8.52:0,9,94	1/1:24,0:18:2.47:8,2,0	0/1:17,0:16:14.88:15,0,169	./.
chr10	98361805	.	A	AATC	1628.57	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.777;DP=634;FS=3.378;HRun=0;HaplotypeScore=86.3324;InbreedingCoeff=0.9928;MQ=73.73;MQ0=3;MQRankSum=-1.816;QD=33.24;ReadPosRankSum=-1.545;VQSLOD=3.8076;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:51.61:0,52,716	0/0:11,0:11:33.10:0,33,459	0/0:29,0:23:20.15:0,20,411	0/0:20,0:18:18.04:0,18,222	0/0:22,0:22:48.16:0,48,693	0/0:20,0:20:54.18:0,54,781	0/0:28,0:28:54.16:0,54,744	1/1:18,14:32:42.14:830,42,0	0/0:17,0:17:42.14:0,42,607	0/0:20,0:20:45.09:0,45,651	0/0:20,0:20:51.17:0,51,738	0/0:30,0:30:63.20:0,63,891	0/0:25,0:25:32.20:0,32,755	0/0:18,0:18:48.11:0,48,668	0/0:28,0:28:66.20:0,66,919	0/0:23,0:23:63.21:0,63,895	0/0:18,0:18:42.12:0,42,571	0/0:21,0:21:45.15:0,45,651	0/0:13,0:13:33.10:0,33,439	0/0:31,0:31:63.21:0,63,910	0/0:21,0:21:48.16:0,48,692	0/0:23,0:23:63.21:0,63,907	0/0:29,0:29:81.26:0,81,1150	0/0:24,0:25:60.28:0,60,889	0/0:26,0:26:66.18:0,66,929	0/0:23,0:23:54.17:0,54,765	0/0:18,0:18:48.15:0,48,670	1/1:1,16:17:45.15:921,45,0
chr10	98361921	.	GAGAT	G	443.24	PASS	AB=0.963;AC=6;AF=0.115;AN=52;BaseQRankSum=2.141;DP=674;FS=0.000;HRun=0;HaplotypeScore=136.8931;InbreedingCoeff=0.4298;MQ=74.17;MQ0=3;MQRankSum=0.318;QD=4.62;ReadPosRankSum=0.402;VQSLOD=1.8365;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,2:25:67.39:67,0,599	0/0:9,0:9:9.03:0,9,212	./.	./.	0/0:8,0:20:19.13:0,19,291	0/0:24,0:24:30.09:0,30,500	0/1:22,0:23:49.37:49,0,77	1/1:33,0:33:6.39:40,6,0	0/0:25,0:25:18.01:0,18,232	0/0:17,0:25:11.58:0,12,326	0/0:9,0:16:12.04:0,12,199	0/0:37,0:37:8.05:0,8,101	0/0:32,0:32:24.08:0,24,438	0/0:18,0:18:0:0,0,0	0/0:35,0:35:5.07:0,5,322	0/0:29,0:29:1.66:0,2,919	0/0:25,0:25:36.89:0,37,930	0/0:6,0:17:8.98:0,9,124	1/1:6,9:15:27.09:411,27,0	0/0:29,0:29:45.15:0,45,1002	0/0:17,0:17:33.11:0,33,772	0/0:26,0:26:24.03:0,24,398	0/0:22,0:22:21.04:0,21,317	0/0:18,0:18:13.27:0,13,189	0/0:19,0:32:21.07:0,21,385	0/0:23,0:23:39.08:0,39,818	0/0:41,0:41:63.22:0,63,1398	0/0:15,0:15:5.93:0,6,39
chr10	98361961	.	T	TAGAC	2336.74	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=11.441;DP=682;FS=0.000;HRun=0;HaplotypeScore=128.8094;InbreedingCoeff=-0.0281;MQ=62.81;MQ0=12;MQRankSum=-0.959;QD=5.35;ReadPosRankSum=4.036;VQSLOD=2.3305;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:42.33:0,42,794	0/0:5,0:5:15.02:0,15,220	0/0:22,0:6:14.74:0,15,120	0/0:40,0:18:14.16:0,14,136	0/1:22,0:22:99:142,0,231	0/1:25,0:25:99:141,0,141	0/1:26,0:26:45.84:46,0,232	1/1:35,0:35:79.78:636,80,0	0/1:20,0:20:53.94:82,0,54	0/1:26,0:26:99:176,0,388	0/1:16,0:16:99:105,0,145	1/1:31,0:31:12.01:120,12,0	1/1:29,0:29:24:236,24,0	0/1:17,0:17:0:0,0,0	0/1:31,0:31:97.69:107,0,98	0/0:25,0:25:72.13:0,72,1038	0/0:27,0:27:47.83:0,48,908	0/1:25,0:25:64.45:64,0,234	0/1:17,0:17:26.66:27,0,296	0/0:25,0:25:66.13:0,66,1010	0/0:16,0:16:42.08:0,42,695	0/1:33,0:33:44.78:145,0,45	0/1:19,0:19:63.94:64,0,111	0/1:19,0:19:43.91:47,0,44	0/1:23,0:23:99:224,0,190	0/0:26,0:26:77.86:0,78,987	0/0:30,0:30:89.89:0,90,1339	1/1:1,22:22:6.02:152,6,0
chr10	98361965	.	T	TAGAC	4760.84	PASS	AB=0.826;AC=26;AF=0.464;AN=56;BaseQRankSum=1.585;DP=713;FS=0.413;HRun=0;HaplotypeScore=131.5707;InbreedingCoeff=0.4419;MQ=65.01;MQ0=10;MQRankSum=0.045;QD=10.77;ReadPosRankSum=1.719;VQSLOD=4.3198;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:64.49:0,64,777	0/0:5,0:5:15.02:0,15,211	0/0:23,0:8:11.45:0,11,143	0/0:40,0:22:30.44:0,30,225	0/1:21,0:21:99:143,0,229	1/1:5,19:25:18.06:467,18,0	1/1:27,0:27:47.86:441,48,0	1/1:37,0:37:90.84:707,91,0	1/1:3,17:22:9.03:233,9,0	0/1:27,0:27:99:173,0,385	0/1:16,0:16:99:105,0,145	1/1:0,1:33:11.95:243,12,0	1/1:0,31:31:23.98:623,24,0	0/1:1,0:18:0:0,0,0	1/1:6,26:36:14.78:333,15,0	0/0:26,0:26:72.09:0,72,986	0/0:27,0:27:62.30:0,62,865	0/1:27,0:27:80.82:81,0,277	0/0:16,0:16:34.13:0,34,414	0/0:24,0:24:66.07:0,66,865	0/0:17,0:17:45.06:0,45,646	1/1:3,31:35:18.03:468,18,0	0/1:4,15:22:11.48:222,0,11	0/1:3,17:20:13.54:147,0,14	0/1:22,0:22:99:224,0,188	0/0:27,0:27:78.05:0,78,940	0/0:34,0:34:90.09:0,90,1213	1/1:23,0:22:6.02:152,6,0
chr10	98363276	.	AAAAC	A	931.44	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.154;DP=776;FS=0.779;HRun=0;HaplotypeScore=120.4389;InbreedingCoeff=0.9025;MQ=62.62;MQ0=4;MQRankSum=0.339;QD=23.88;ReadPosRankSum=-5.054;VQSLOD=2.6455;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,120,2834	0/0:15,0:15:33.11:0,33,815	0/0:35,0:31:48.47:0,48,985	0/0:26,0:18:38.98:0,39,836	0/0:31,0:30:72.25:0,72,1750	0/0:18,0:18:48.16:0,48,1165	0/0:31,0:31:75.26:0,75,1787	1/1:10,24:34:69.14:990,69,0	0/0:21,0:21:51.12:0,51,1121	0/0:26,0:26:72.24:0,72,1735	0/0:26,0:26:72.23:0,72,1736	0/0:31,0:31:75.26:0,75,1804	0/0:29,0:29:81.28:0,81,1959	0/0:19,0:19:57.20:0,57,1372	0/0:19,0:19:42.14:0,42,1001	0/0:33,0:33:78.27:0,78,1907	0/0:37,0:38:99:0,102,2389	0/0:22,0:22:48.13:0,48,1076	0/0:21,0:21:51.14:0,51,1177	0/0:25,0:25:63.20:0,63,1502	0/0:29,0:29:84.29:0,84,2069	0/0:31,0:30:63.20:0,63,1508	0/0:36,0:36:96.31:0,96,2264	0/0:32,0:32:78.27:0,78,1897	0/0:31,0:31:75.24:0,75,1773	0/0:30,0:30:78.27:0,78,1898	0/0:35,0:35:96.33:0,96,2348	1/1:1,4:5:3.01:50,3,0
chr10	98365655	.	TCC	T	1420.63	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.907;DP=758;FS=1.411;HRun=2;HaplotypeScore=99.6576;InbreedingCoeff=0.9688;MQ=82.73;MQ0=0;MQRankSum=-1.610;QD=43.05;ReadPosRankSum=-3.008;VQSLOD=2.8516;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,153,2988	0/0:9,0:9:27.09:0,27,549	0/0:23,0:23:66.22:0,66,1292	0/0:21,0:21:57.13:0,57,1094	0/0:30,0:30:90.31:0,90,1781	0/0:31,0:31:93.30:0,93,1825	0/0:28,0:28:84.27:0,84,1670	1/1:0,30:30:90.24:1388,90,0	0/0:23,0:23:69.24:0,69,1402	0/0:25,0:25:72.25:0,72,1460	0/0:24,0:24:69.24:0,69,1402	0/0:37,0:37:99:0,111,2235	0/0:33,0:33:99:0,99,1997	0/0:27,0:27:81.28:0,81,1637	0/0:35,0:35:99:0,105,2062	0/0:34,0:34:99:0,102,2037	0/0:32,0:32:93.28:0,93,1849	0/0:20,0:20:60.16:0,60,1139	0/0:25,0:25:72.25:0,72,1464	0/0:31,0:31:90.31:0,90,1829	0/0:20,0:19:60.19:0,60,1182	0/0:38,0:38:99:0,114,2308	0/0:24,0:24:72.25:0,72,1453	0/0:15,0:15:42.14:0,42,853	0/0:21,0:21:60.21:0,60,1209	0/0:29,0:29:87.28:0,87,1687	0/0:39,0:38:99:0,117,2365	1/1:0,3:3:9.03:147,9,0
chr10	98368229	.	T	TAGTTTGGATTC	30735.58	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-10.015;DP=737;FS=1.774;HRun=0;HaplotypeScore=193.6372;InbreedingCoeff=0.9990;MQ=81.61;MQ0=0;MQRankSum=-19.251;QD=105.26;ReadPosRankSum=3.997;VQSLOD=4.6929;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,4127	0/0:10,0:10:24.06:0,24,756	0/0:24,0:24:64.10:0,64,1710	0/0:23,0:23:58.81:0,59,1804	0/0:25,0:25:69.22:0,69,2293	1/1:4,20:32:69.24:3834,69,0	1/1:5,9:23:36.12:1857,36,0	0/0:44,0:44:99:0,111,3383	1/1:6,17:31:60.21:3332,60,0	0/0:22,0:22:54.05:0,54,1732	0/0:27,0:27:81.26:0,81,2604	1/1:5,19:37:69.24:3779,69,0	1/1:7,11:23:54.19:2897,54,0	1/1:7,21:37:87.30:4661,87,0	1/1:13,9:28:51.18:2492,51,0	0/0:28,0:28:84.29:0,84,2773	0/0:32,0:32:90.29:0,90,2787	0/0:30,0:30:87.27:0,87,2730	0/0:26,0:26:72.25:0,72,2191	0/0:17,0:17:51.16:0,51,1665	0/0:17,0:17:51.18:0,51,1727	1/1:6,20:36:84.12:3968,84,0	1/1:4,13:23:47.90:2660,48,0	1/1:3,8:22:30.10:1255,30,0	0/0:25,0:25:75.22:0,75,2410	0/0:24,0:24:69.24:0,69,2304	0/0:22,0:22:66.19:0,66,2025	0/0:7,0:7:21.07:0,21,734
chr10	98368773	.	A	ATC	613.99	PASS	AB=0.950;AC=16;AF=0.381;AN=42;BaseQRankSum=-3.078;DP=617;FS=0.000;HRun=0;HaplotypeScore=91.3263;InbreedingCoeff=0.2583;MQ=72.35;MQ0=19;MQRankSum=1.521;QD=2.44;ReadPosRankSum=0.177;VQSLOD=1.2265;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:20:3.73:0,4,16	0/1:8,0:8:0:0,0,0	./.	./.	./.	0/0:25,0:26:2.79:0,3,13	1/1:35,0:34:9.50:246,10,0	0/1:43,0:43:0:0,0,0	0/0:21,0:21:15.04:0,15,158	1/1:25,0:25:18.98:206,19,0	1/1:19,0:19:3:25,3,0	0/0:18,0:18:2.67:0,3,23	0/0:16,0:16:3.01:0,3,32	0/0:18,0:18:12.31:0,12,102	0/0:22,0:23:11.13:0,11,70	0/0:16,0:20:12.78:0,13,76	0/1:17,7:25:35.65:47,0,36	0/0:14,0:21:7.39:0,7,50	./.	0/1:14,0:13:18.19:19,0,18	1/1:27,0:24:9.03:116,9,0	0/0:23,0:23:2.84:0,3,14	./.	0/1:20,2:22:31.45:31,0,73	1/1:17,0:17:3:25,3,0	./.	0/1:16,0:17:33.67:34,0,37	./.
chr10	98370449	.	CA	C	5338.41	PASS	AB=0.763;AC=28;AF=0.500;AN=56;BaseQRankSum=10.589;DP=631;FS=1.034;HRun=12;HaplotypeScore=76.0956;InbreedingCoeff=0.8208;MQ=74.59;MQ0=0;MQRankSum=-0.822;QD=16.18;ReadPosRankSum=3.073;VQSLOD=5.9280;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:24:50.77:0,51,485	0/0:14,0:14:33.07:0,33,335	0/0:16,0:15:11.15:0,11,76	0/1:14,1:15:27.40:27,0,100	0/0:35,1:37:78.74:0,79,953	1/1:4,21:25:62.74:488,63,0	1/1:2,14:16:40.89:308,41,0	1/1:6,21:29:38.48:428,38,0	1/1:1,15:17:40.16:306,40,0	0/0:24,0:24:48.09:0,48,483	0/0:27,2:30:22.48:0,22,566	1/1:5,19:24:56.78:441,57,0	1/1:4,14:20:45.90:337,46,0	1/1:2,23:25:65.63:509,66,0	1/1:3,22:25:53.76:418,54,0	0/1:10,21:33:15.72:383,0,16	0/0:18,0:18:25.15:0,25,425	0/0:25,0:25:66.03:0,66,641	0/0:16,1:19:21.52:0,22,369	0/0:23,0:23:54.10:0,54,542	0/0:24,1:27:45.49:0,45,601	1/1:2,19:23:57.85:430,58,0	1/1:3,15:18:11.40:272,11,0	1/1:1,12:13:2.44:202,2,0	0/0:16,1:18:21.68:0,22,382	1/1:6,24:31:49.26:552,49,0	0/0:22,2:24:19.64:0,20,550	1/1:5,10:16:31.89:238,32,0
chr10	98373885	.	T	TTGTG	4949.31	PASS	AB=0.870;AC=27;AF=0.519;AN=52;BaseQRankSum=-2.342;DP=581;FS=2.474;HRun=0;HaplotypeScore=131.1175;InbreedingCoeff=0.5701;MQ=62.17;MQ0=8;MQRankSum=0.486;QD=14.02;ReadPosRankSum=-0.524;VQSLOD=4.5002;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:29:5.96:226,6,0	0/0:7,0:7:9.50:0,9,128	./.	./.	0/0:22,0:23:38.33:0,38,532	0/1:20,4:24:99:389,0,119	1/1:21,3:27:23.24:310,23,0	0/1:19,0:21:13.57:14,0,47	1/1:10,0:11:11.69:112,12,0	0/1:16,0:27:91.34:153,0,91	0/1:13,0:18:33.14:35,0,33	1/1:10,2:12:8.73:209,9,0	1/1:17,1:18:25.72:363,26,0	1/1:13,3:16:24.01:425,24,0	1/1:20,7:28:38.75:805,39,0	0/1:17,0:24:5.54:6,0,196	0/0:16,0:18:30.08:0,30,410	1/1:18,0:18:21.02:311,21,0	0/0:14,0:14:6.02:0,6,94	0/0:21,0:21:30.02:0,30,374	0/0:24,0:24:15.05:0,15,236	1/1:19,3:23:26.81:500,27,0	1/1:10,8:19:32.82:687,33,0	1/1:28,5:32:17.90:405,18,0	0/0:25,0:27:39.12:0,39,575	0/0:14,0:17:12.01:0,12,111	0/0:18,0:18:30.10:0,30,471	0/0:6,0:11:15.02:0,15,139
chr10	98373930	.	G	GTTT	2908.16	PASS	AB=0.751;AC=31;AF=0.554;AN=56;BaseQRankSum=5.888;DP=644;FS=3.657;HRun=12;HaplotypeScore=134.1171;InbreedingCoeff=0.6113;MQ=62.63;MQ0=17;MQRankSum=-3.576;QD=6.86;ReadPosRankSum=-3.853;VQSLOD=-0.1238;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:21,1:27:21.90:358,22,0	0/0:10,0:10:17.88:0,18,202	0/1:43,0:15:17.32:17,0,115	0/0:30,0:15:9.50:0,9,214	0/0:28,0:29:16:0,16,491	0/1:11,0:26:23.90:24,0,48	1/1:7,0:19:14.20:48,14,0	1/1:9,3:27:53.56:470,54,0	1/1:2,0:13:16.39:80,16,0	0/0:34,0:35:64.20:0,64,697	0/0:18,0:18:38.72:0,39,414	1/1:8,0:13:13.06:59,13,0	1/1:9,0:24:23.06:119,23,0	1/1:4,0:12:12.22:63,12,0	1/1:10,0:19:10.46:40,10,0	1/1:12,9:24:22.30:338,22,0	0/0:18,0:21:4.53:0,5,227	1/1:7,2:20:23.95:263,24,0	0/0:15,0:15:28.36:0,28,333	0/0:20,0:22:5.76:0,6,274	0/0:17,0:18:11.43:0,11,304	0/1:5,0:20:9.83:59,0,10	1/1:14,0:27:24.29:84,24,0	0/1:8,0:25:15.39:32,0,15	0/1:20,0:21:1.22:1,0,208	1/1:10,11:24:39.07:607,39,0	0/0:19,0:19:29.69:0,30,311	1/1:8,0:30:53.29:453,53,0
chr10	98375922	.	ATTTT	A	4347.07	PASS	AB=0.587;AC=22;AF=0.393;AN=56;BaseQRankSum=4.757;DP=531;FS=10.049;HRun=15;HaplotypeScore=104.2107;InbreedingCoeff=0.8204;MQ=63.03;MQ0=4;MQRankSum=-2.351;QD=20.70;ReadPosRankSum=4.071;VQSLOD=3.0638;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:50:99:0,114,1493	0/0:6,0:6:12.04:0,12,251	0/0:9,0:8:6.02:0,6,86	0/0:6,0:3:3.01:0,3,57	0/0:15,0:18:36.07:0,36,604	1/1:3,11:14:33.05:442,33,0	1/1:2,12:14:30.06:409,30,0	0/1:11,1:27:28.87:53,0,29	1/1:6,4:10:8.89:122,9,0	0/0:21,0:24:54.17:0,54,1010	0/0:16,0:18:42.14:0,42,896	1/1:5,13:18:32.99:428,33,0	1/1:4,12:17:42.01:555,42,0	1/1:2,16:19:45.12:596,45,0	1/1:6,17:24:47.97:631,48,0	0/0:4,0:17:31.43:0,31,248	0/0:25,0:29:61.26:0,61,1276	0/0:13,0:31:65.98:0,66,773	0/0:17,0:18:39.13:0,39,832	0/0:15,0:17:36.02:0,36,604	0/0:12,0:13:30.10:0,30,610	1/1:5,14:19:26.81:367,27,0	1/1:10,13:23:34.34:488,34,0	1/1:5,8:13:17.98:245,18,0	0/0:19,0:20:51.06:0,51,973	0/0:10,0:19:47.46:0,47,469	0/0:21,0:22:50.94:0,51,891	0/1:2,0:11:4.18:13,0,4
chr10	98376885	.	CCT	C	11004.26	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=11.171;DP=761;FS=14.199;HRun=0;HaplotypeScore=102.3314;InbreedingCoeff=0.9990;MQ=88.08;MQ0=2;MQRankSum=-2.688;QD=40.46;ReadPosRankSum=6.421;VQSLOD=5.8250;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,2639	0/0:8,0:8:24.08:0,24,487	0/0:26,0:26:78.21:0,78,1423	0/0:31,0:31:87:0,87,1490	0/0:23,0:23:69.18:0,69,1289	1/1:0,23:23:63.22:1025,63,0	1/1:0,22:22:57.19:927,57,0	0/0:39,0:39:99:0,117,2257	1/1:0,29:28:69.15:1090,69,0	0/0:25,0:25:69.23:0,69,1349	0/0:16,0:16:45.15:0,45,913	1/1:0,25:25:69.23:1106,69,0	1/1:0,28:28:72.25:1159,72,0	1/1:0,37:37:90.21:1404,90,0	1/1:2,22:23:60.20:974,60,0	0/0:16,0:16:42.13:0,42,816	0/0:50,0:50:99:0,150,2839	0/0:34,0:34:99:0,102,1841	0/0:12,0:12:36.08:0,36,656	0/0:7,0:7:21.07:0,21,426	0/0:66,0:65:99:0,196,3800	1/1:1,21:22:57.18:928,57,0	1/1:0,15:15:29.84:488,30,0	1/1:0,47:47:99:1904,117,0	0/0:26,0:26:78.24:0,78,1497	0/0:33,0:33:99:0,99,1954	0/0:16,0:16:48.15:0,48,940	0/0:14,0:14:42.14:0,42,852
chr10	98377018	.	GC	G	5084.91	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=11.791;DP=572;FS=32.791;HRun=1;HaplotypeScore=111.6058;InbreedingCoeff=0.9739;MQ=74.48;MQ0=2;MQRankSum=-10.975;QD=34.13;ReadPosRankSum=-2.838;VQSLOD=2.0117;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1855	0/0:12,0:12:36.10:0,36,544	0/0:16,0:15:45.10:0,45,626	0/0:37,0:30:83.67:0,84,1023	0/0:23,0:23:69.09:0,69,976	1/1:5,11:15:42.10:513,42,0	1/1:4,10:14:39.11:506,39,0	0/0:28,0:28:84.23:0,84,1248	1/1:6,3:9:27.03:300,27,0	0/0:28,0:28:81.23:0,81,1192	0/0:18,0:18:54.14:0,54,804	1/1:1,12:12:36.12:483,36,0	1/1:5,11:16:48.14:609,48,0	1/1:4,7:11:33.08:397,33,0	1/1:2,17:19:54.17:704,54,0	0/0:20,0:20:27.63:0,28,482	0/0:31,0:31:93.26:0,93,1409	0/0:16,0:16:48.16:0,48,761	0/0:19,0:19:57.16:0,57,828	0/0:31,0:30:90.25:0,90,1340	0/0:29,0:29:84.26:0,84,1290	1/1:6,7:13:39.06:447,39,0	1/1:2,18:20:54.64:689,55,0	1/1:9,9:18:39.52:438,40,0	0/0:24,0:24:72.20:0,72,1077	0/0:21,0:21:63.21:0,63,981	0/0:25,0:24:75.19:0,75,1119	0/0:3,0:3:3.01:0,3,48
chr10	98377022	.	A	AAAAACAAAACAAAAC	3139.12	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=2.783;DP=592;FS=8.073;HRun=0;HaplotypeScore=292.5350;InbreedingCoeff=0.5473;MQ=67.88;MQ0=3;MQRankSum=-7.957;QD=37.37;ReadPosRankSum=-0.465;VQSLOD=1.7030;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:93.30:0,93,2797	0/0:12,0:12:30.09:0,30,994	0/0:14,0:12:6.01:0,6,64	0/0:34,0:27:16.93:0,17,258	0/0:24,0:24:39.11:0,39,1222	0/0:15,0:14:14.60:0,15,178	0/0:13,0:13:5.24:0,5,68	0/0:31,0:31:33.08:0,33,780	1/1:8,0:8:1.55:4,2,0	0/0:30,0:30:57.16:0,57,1649	0/0:19,0:19:45.14:0,45,1344	0/0:15,0:12:12.78:0,13,309	0/0:16,0:16:16.44:0,16,185	0/0:11,0:11:1.84:0,2,23	0/0:23,0:21:30.30:0,30,487	1/1:10,9:25:8.79:615,9,0	0/0:32,0:32:51.16:0,51,1627	0/0:18,0:18:45.05:0,45,1112	0/0:19,0:19:21.07:0,21,731	0/0:30,0:29:66.21:0,66,2407	0/0:29,0:29:63.21:0,63,2157	0/0:12,0:12:2.93:0,3,142	0/1:20,0:19:23.15:23,0,76	0/0:14,0:14:4.70:0,5,100	0/0:26,0:26:66.20:0,66,1774	1/1:30,0:30:63.21:2620,63,0	0/0:25,0:24:54.16:0,54,1597	./.
chr10	98377032	.	CA	C	1387.23	PASS	AB=0.667;AC=19;AF=0.339;AN=56;BaseQRankSum=13.527;DP=564;FS=101.688;HRun=4;HaplotypeScore=135.5929;InbreedingCoeff=0.8658;MQ=57.30;MQ0=3;MQRankSum=-13.066;QD=10.28;ReadPosRankSum=1.159;VQSLOD=-0.4473;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,115,1574	0/0:12,0:12:36.12:0,36,504	0/0:12,0:9:21.07:0,21,293	0/0:26,0:18:27.55:0,28,349	0/0:22,0:22:66.21:0,66,903	1/1:3,12:13:32.46:268,32,0	1/1:5,5:10:14.57:104,15,0	0/0:35,0:35:84.28:0,84,1174	1/1:1,3:4:9.21:65,9,0	0/0:27,0:27:75.24:0,75,1036	0/0:22,0:22:66.22:0,66,913	1/1:5,8:10:13.83:157,14,0	0/1:8,8:16:4.52:151,0,5	1/1:7,4:11:7.63:74,8,0	1/1:8,15:21:23.11:313,23,0	0/0:25,0:24:26.44:0,26,337	0/0:28,0:28:75.25:0,75,1050	0/0:20,0:20:60.16:0,60,817	0/0:18,0:18:54.13:0,54,696	0/0:28,0:27:78.26:0,78,1090	0/0:29,0:29:81.26:0,81,1115	1/1:3,6:9:8.77:94,9,0	1/1:4,14:17:37.84:263,38,0	1/1:10,6:16:1.73:99,2,0	0/0:28,0:28:84.28:0,84,1173	0/0:26,0:26:72.22:0,72,986	0/0:26,0:25:75.24:0,75,1033	0/0:6,0:6:12.02:0,12,149
chr10	98377037	.	CA	C	479.59	PASS	AB=0.947;AC=13;AF=0.232;AN=56;BaseQRankSum=11.478;DP=562;FS=23.734;HRun=4;HaplotypeScore=136.6767;InbreedingCoeff=0.4512;MQ=55.03;MQ0=4;MQRankSum=-10.561;QD=3.78;ReadPosRankSum=-0.138;VQSLOD=-0.6795;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,121,1570	0/0:13,0:13:39.12:0,39,523	0/0:10,0:7:18.03:0,18,232	0/0:25,0:16:31.78:0,32,388	0/0:20,0:20:54.18:0,54,755	1/1:13,2:13:1.47:81,1,0	0/1:6,1:7:3.74:37,0,4	0/0:34,0:34:87.28:0,87,1192	0/0:4,1:4:0.60:0,1,9	0/0:27,0:27:78.25:0,78,1078	0/0:23,0:23:69.22:0,69,936	1/1:15,0:12:5.86:116,6,0	0/1:15,1:16:29.12:43,0,29	0/1:10,1:11:25.81:26,0,29	0/1:22,0:20:9.17:93,0,9	0/0:24,0:23:26.40:0,26,303	0/0:27,0:27:81.26:0,81,1114	0/0:20,0:20:60.20:0,60,839	0/0:19,0:19:51.16:0,51,696	0/0:29,0:28:84.27:0,84,1158	0/0:30,0:30:84.26:0,84,1156	1/1:8,1:9:18.88:101,19,0	1/1:14,3:15:13.53:98,14,0	0/1:15,0:15:7.43:47,0,7	0/0:29,0:28:81.27:0,81,1133	0/0:25,0:25:72.21:0,72,968	0/0:25,0:24:69.23:0,69,957	0/0:6,0:6:12.04:0,12,168
chr10	98377041	.	AC	A	1537.04	PASS	AB=0.800;AC=19;AF=0.339;AN=56;BaseQRankSum=14.881;DP=554;FS=39.944;HRun=1;HaplotypeScore=130.9800;InbreedingCoeff=0.9346;MQ=51.48;MQ0=4;MQRankSum=-13.954;QD=11.47;ReadPosRankSum=-1.792;VQSLOD=-0.3596;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,115,1611	0/0:13,0:13:38.97:0,39,519	0/0:10,0:5:15.05:0,15,219	0/0:21,0:13:21.39:0,21,383	0/0:19,0:19:56.85:0,57,780	1/1:12,4:14:33.92:231,34,0	1/1:5,2:7:19.45:114,19,0	0/0:34,0:34:87.23:0,87,1196	0/1:3,1:3:3.38:33,0,3	0/0:26,0:26:78.24:0,78,1106	0/0:24,0:24:72.18:0,72,1004	1/1:10,6:13:23.26:207,23,0	1/1:12,4:16:29.68:224,30,0	1/1:11,1:12:22.70:142,23,0	1/1:16,0:21:38.67:227,39,0	0/0:20,0:19:23.44:0,23,298	0/0:27,0:27:81.19:0,81,1119	0/0:20,0:20:60.20:0,60,872	0/0:19,0:19:57.15:0,57,748	0/0:31,0:30:90.27:0,90,1275	0/0:29,0:29:87.24:0,87,1211	1/1:4,6:10:22.89:184,23,0	1/1:8,7:13:37.45:256,37,0	1/1:11,4:15:18.18:134,18,0	0/0:29,0:28:84.25:0,84,1189	0/0:26,0:26:75.13:0,75,917	0/0:24,0:23:72.16:0,72,966	0/0:6,0:6:12.04:0,12,175
chr10	98377046	.	ACAAAAAC	A	2448.10	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.074;DP=568;FS=20.666;HRun=0;HaplotypeScore=195.9345;InbreedingCoeff=0.9536;MQ=52.32;MQ0=6;MQRankSum=-13.644;QD=17.12;ReadPosRankSum=-2.830;VQSLOD=0.8449;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,2973	0/0:11,0:11:33.10:0,33,1073	0/0:15,0:8:7.38:0,7,308	0/0:21,0:14:13.25:0,13,468	0/0:17,0:17:51.16:0,51,1664	1/1:13,2:15:12.49:229,12,0	1/1:9,1:10:25.07:197,25,0	0/0:30,0:30:73.27:0,73,977	1/1:5,0:4:3.73:21,4,0	0/0:26,0:26:78.24:0,78,2300	0/0:26,0:26:78.08:0,78,1783	1/1:11,5:14:32.80:384,33,0	1/1:15,3:18:24.42:292,24,0	1/1:9,1:11:23.91:221,24,0	1/1:22,0:21:59.64:692,60,0	0/0:22,0:21:32.39:0,32,675	0/0:26,0:26:78.10:0,78,2030	0/0:21,0:21:62.87:0,63,1262	0/0:16,0:16:48.04:0,48,1027	0/0:31,0:30:90.24:0,90,2616	0/0:30,0:30:90.23:0,90,2428	1/1:8,3:12:22.80:259,23,0	1/1:12,1:13:26.24:188,26,0	1/1:13,1:15:17.51:179,18,0	0/0:30,0:29:87.12:0,87,2359	0/0:27,0:27:77.01:0,77,1435	0/0:23,0:22:69.16:0,69,1887	0/0:9,0:9:21.05:0,21,322
chr10	98377047	.	CA	C	195.76	PASS	AB=0.969;AC=8;AF=0.143;AN=56;BaseQRankSum=10.331;DP=574;FS=7.451;HRun=5;HaplotypeScore=144.0311;InbreedingCoeff=-0.1366;MQ=52.10;MQ0=5;MQRankSum=-9.654;QD=1.40;ReadPosRankSum=1.321;VQSLOD=-0.3039;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,1609	0/0:11,0:11:33.11:0,33,451	0/0:14,1:8:22.88:0,23,268	0/0:20,0:14:31.80:0,32,359	0/0:17,0:17:48.15:0,48,643	0/0:17,0:15:3.20:0,3,90	0/0:12,0:12:2.07:0,2,22	0/0:29,0:29:57.19:0,57,769	0/0:7,0:6:5.77:0,6,45	0/0:27,0:27:78.26:0,78,1065	0/0:26,0:26:72.71:0,73,982	0/1:17,0:14:28.08:28,0,39	0/1:18,0:18:13.24:13,0,59	0/1:12,0:12:11.81:12,0,13	0/1:23,0:21:10.53:11,0,60	0/0:22,0:21:29.34:0,29,361	0/0:28,0:28:78.23:0,78,1025	0/0:21,0:21:57.10:0,57,723	0/0:16,0:16:45.15:0,45,605	0/0:30,0:30:84.28:0,84,1148	0/0:31,0:31:93.30:0,93,1253	0/1:12,0:12:11.23:20,0,11	0/1:16,0:14:4.64:5,0,14	0/1:15,0:15:6.11:6,0,27	0/0:29,0:28:81.25:0,81,1077	0/1:18,9:27:99:227,0,388	0/0:23,0:22:69.23:0,69,938	0/0:10,0:10:18.06:0,18,243
chr10	98377052	.	AC	A	1615.92	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=15.728;DP=583;FS=5.286;HRun=1;HaplotypeScore=138.4026;InbreedingCoeff=0.9046;MQ=55.60;MQ0=4;MQRankSum=-14.266;QD=9.03;ReadPosRankSum=-2.642;VQSLOD=0.2211;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,123,1482	0/0:11,0:11:33.11:0,33,448	0/0:14,0:7:18.90:0,19,223	0/0:19,0:16:33.23:0,33,398	0/0:16,0:16:48.16:0,48,653	1/1:16,1:15:11.99:75,12,0	1/1:12,0:12:15.87:136,16,0	0/0:28,0:28:63.05:0,63,782	1/1:7,0:6:8.58:50,9,0	0/0:30,0:30:90.20:0,90,1129	0/0:26,0:26:59.52:0,60,947	1/1:16,1:14:36.09:223,36,0	1/1:20,0:20:48.65:329,49,0	1/1:12,1:13:34.10:220,34,0	1/1:16,7:21:26.52:272,27,0	0/0:21,0:20:29.47:0,29,375	0/0:28,0:28:84.07:0,84,1026	0/0:19,0:19:50.95:0,51,606	0/0:18,0:18:54.02:0,54,628	0/0:30,0:30:87.25:0,87,1152	0/0:33,0:33:96.29:0,96,1266	1/1:14,0:14:30.55:189,31,0	1/1:14,0:12:26.44:137,26,0	1/1:15,0:15:19.01:123,19,0	0/0:29,0:28:83.48:0,83,1017	0/1:27,0:27:80.79:81,0,379	0/0:27,0:26:81.15:0,81,980	0/0:10,0:10:21.05:0,21,267
chr10	98377065	.	AAC	A	2266.11	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=11.779;DP=567;FS=7.030;HRun=0;HaplotypeScore=129.8936;InbreedingCoeff=0.6929;MQ=66.51;MQ0=3;MQRankSum=-6.446;QD=8.18;ReadPosRankSum=-2.940;VQSLOD=2.1817;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:22.74:23,0,433	0/0:13,0:13:36.12:0,36,634	0/0:18,0:12:23.37:0,23,462	0/0:21,0:19:52.18:0,52,712	0/0:19,0:19:57.17:0,57,943	1/1:13,0:12:19.87:75,20,0	1/1:14,1:15:17.46:92,17,0	1/1:3,22:25:64.66:828,65,0	1/1:7,0:7:5.62:37,6,0	0/0:32,0:32:96.32:0,96,1616	0/0:22,0:22:51.24:0,51,1091	1/1:16,0:16:25.98:130,26,0	1/1:19,0:19:21.60:107,22,0	1/1:11,0:11:23.26:96,23,0	1/1:19,0:19:31.83:291,32,0	0/1:20,0:19:1.05:1,0,154	0/0:28,0:28:84.24:0,84,1408	0/1:17,0:17:16.72:17,0,176	0/0:24,0:24:68.98:0,69,1058	0/0:30,0:30:90.26:0,90,1479	0/0:32,0:32:87.26:0,87,1480	1/1:11,0:11:15.22:82,15,0	1/1:10,0:9:11.16:39,11,0	1/1:12,0:12:1.88:37,2,0	0/0:27,0:26:78.24:0,78,1310	0/1:31,0:31:99:177,0,126	0/0:24,0:23:72.15:0,72,1116	1/1:0,13:13:30.10:447,30,0
chr10	98377066	.	AC	A	4762.37	PASS	AB=0.961;AC=28;AF=0.500;AN=56;BaseQRankSum=13.213;DP=567;FS=4.648;HRun=1;HaplotypeScore=111.0903;InbreedingCoeff=0.7092;MQ=68.98;MQ0=3;MQRankSum=-8.897;QD=17.44;ReadPosRankSum=-2.280;VQSLOD=4.3998;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:36,2:38:67.72:198,0,68	0/0:12,0:12:36.12:0,36,502	0/0:19,0:13:31.86:0,32,434	0/0:23,0:21:58.80:0,59,676	0/0:20,0:20:57.16:0,57,759	1/1:0,13:12:24.08:331,24,0	1/1:2,13:15:23.95:282,24,0	1/1:23,1:24:62.33:450,62,0	1/1:1,6:7:17.97:207,18,0	0/0:32,0:32:96.30:0,96,1299	0/0:23,0:23:50.93:0,51,882	1/1:2,14:16:34.60:434,35,0	1/1:3,16:19:39.64:544,40,0	1/1:0,11:11:29.13:369,29,0	1/1:6,13:19:56.88:622,57,0	0/1:20,0:19:20.48:51,0,20	0/0:28,0:28:84.23:0,84,1127	0/1:15,2:17:20.99:98,0,21	0/0:24,0:24:68.97:0,69,857	0/0:30,0:30:90.23:0,90,1169	0/0:31,0:31:87.26:0,87,1192	1/1:0,11:11:24.07:309,24,0	1/1:1,8:9:15.05:198,15,0	1/1:1,11:12:15.47:184,15,0	0/0:28,0:27:81.23:0,81,1076	0/1:29,0:29:27.76:298,0,28	0/0:24,0:23:72.15:0,72,908	1/1:13,0:13:29.56:188,30,0
chr10	98378137	.	AGGCATGGCGTTGTTTCT	A	1697.05	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.097;DP=591;FS=3.985;HRun=0;HaplotypeScore=263.6429;InbreedingCoeff=0.9817;MQ=79.88;MQ0=0;MQRankSum=-4.572;QD=65.27;ReadPosRankSum=0.453;VQSLOD=3.1010;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,154,11372	0/0:13,0:13:30.10:0,30,2461	0/0:17,0:17:43.55:0,44,2375	0/0:15,0:15:45.15:0,45,2770	0/0:22,0:22:66.23:0,66,5358	0/0:15,0:15:45.15:0,45,3601	0/0:32,0:32:87.30:0,87,6443	1/1:10,10:20:27.08:1218,27,0	0/0:19,0:19:51.18:0,51,3975	0/0:27,0:27:81.27:0,81,5574	0/0:10,0:10:30.09:0,30,2193	0/0:20,0:20:48.16:0,48,3606	0/0:13,0:13:39.13:0,39,2860	0/0:15,0:15:45.14:0,45,3268	0/0:16,0:16:42.14:0,42,3506	0/0:21,0:21:63.22:0,63,4756	0/0:30,0:30:90.31:0,90,7192	0/0:29,0:29:84.29:0,84,5635	0/0:17,0:17:51.15:0,51,3114	0/0:17,0:17:51.17:0,51,3817	0/0:50,0:50:99:0,135,9792	0/0:10,0:10:27.09:0,27,2223	0/0:9,0:9:27.08:0,27,1909	0/0:33,0:33:93.32:0,93,7522	0/0:23,0:23:69.24:0,69,5491	0/0:25,0:25:75.24:0,75,5343	0/0:15,0:15:39.13:0,39,2967	1/1:0,6:6:12.04:596,12,0
chr10	98378266	.	C	CTTT	4346.92	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-3.789;DP=586;FS=1.453;HRun=10;HaplotypeScore=76.7833;InbreedingCoeff=0.9624;MQ=58.37;MQ0=9;MQRankSum=-0.345;QD=22.29;ReadPosRankSum=2.858;VQSLOD=3.1873;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:87.06:0,87,1039	0/0:6,0:6:15.01:0,15,167	0/0:16,0:13:18.36:0,18,176	0/0:10,0:7:7.79:0,8,78	0/0:33,0:33:78.15:0,78,922	1/1:4,10:16:18.04:311,18,0	1/1:6,17:24:39.11:715,39,0	0/0:32,0:31:69.11:0,69,802	1/1:4,9:12:8.60:138,9,0	0/0:23,0:23:57.09:0,57,670	0/0:19,0:18:42.09:0,42,496	1/1:4,14:19:25.22:389,25,0	1/1:0,7:8:18.02:277,18,0	1/1:2,0:17:20.93:174,21,0	1/1:2,14:16:24.55:462,25,0	0/0:23,0:23:60.12:0,60,694	0/0:33,0:34:71.37:0,71,873	0/0:31,0:29:74.93:0,75,864	0/0:17,0:17:42.97:0,43,508	0/0:20,0:20:43.90:0,44,505	0/0:13,0:15:19.31:0,19,222	1/1:4,12:18:22.32:374,22,0	1/1:4,21:26:39.06:659,39,0	1/1:5,25:29:31.28:848,31,0	0/0:19,0:20:46.46:0,46,568	0/0:24,0:24:57.12:0,57,682	0/0:25,0:25:72.21:0,72,872	0/0:3,0:3:9.03:0,9,109
chr10	98378861	.	CT	C	13476.51	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=16.564;DP=885;FS=1.106;HRun=1;HaplotypeScore=89.9974;InbreedingCoeff=0.9998;MQ=83.31;MQ0=0;MQRankSum=-4.595;QD=38.84;ReadPosRankSum=4.827;VQSLOD=5.2166;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:67,0:66:99:0,196,3057	0/0:16,0:16:48.16:0,48,767	0/0:35,0:35:99:0,105,1602	0/0:16,0:16:41.90:0,42,571	0/0:20,0:20:60.20:0,60,951	1/1:0,27:27:78.26:1089,78,0	1/1:0,37:37:96.32:1341,96,0	0/0:31,0:31:93.28:0,93,1387	1/1:0,38:38:99:1509,108,0	0/0:34,0:34:99:0,102,1622	0/0:19,0:18:54.18:0,54,859	1/1:0,32:32:96.32:1338,96,0	1/1:0,46:46:99:1922,138,0	1/1:0,32:32:87.29:1212,87,0	1/1:0,38:38:99:1506,108,0	0/0:46,1:47:99:0,100,2119	0/0:41,0:41:99:0,123,1966	0/0:22,0:22:66.23:0,66,1055	0/0:18,0:18:51.13:0,51,768	0/0:23,0:23:63.21:0,63,993	0/0:38,0:38:99:0,114,1812	1/1:0,30:30:78.26:1088,78,0	1/1:0,24:24:60.19:836,60,0	1/1:0,43:43:99:1635,117,0	0/0:32,0:32:93.32:0,93,1481	0/0:35,0:35:99:0,99,1477	0/0:35,0:35:99:0,105,1668	0/0:9,0:9:27.09:0,27,432
chr10	98380150	.	GAC	G	1188.92	PASS	AB=0.889;AC=29;AF=0.580;AN=50;BaseQRankSum=6.533;DP=597;FS=1.419;HRun=0;HaplotypeScore=81.4383;InbreedingCoeff=0.0914;MQ=72.60;MQ0=8;MQRankSum=0.365;QD=3.09;ReadPosRankSum=1.859;VQSLOD=2.0489;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:32:6:0,6,51	0/1:5,2:7:20.87:21,0,116	./.	./.	0/1:17,2:19:14.65:15,0,181	1/1:18,3:23:17.50:127,18,0	1/1:13,7:20:21.05:227,21,0	1/1:22,0:24:3.54:14,4,0	0/1:18,5:23:32.54:86,0,33	0/1:25,1:25:8.49:8,0,234	0/0:13,0:13:6.02:0,6,83	./.	1/1:11,2:14:8.69:78,9,0	1/1:14,6:20:12.03:130,12,0	0/1:15,1:16:37.08:42,0,37	1/1:17,1:24:14.37:88,14,0	0/1:20,1:22:45.96:46,0,297	0/1:13,0:24:14.50:15,0,130	0/0:21,0:19:3:0,3,25	0/0:11,0:11:9.03:0,9,134	0/0:48,0:48:12.08:0,12,493	1/1:14,3:17:8.98:85,9,0	1/1:19,2:21:5.87:52,6,0	0/1:22,5:30:99:176,0,113	0/0:18,0:18:12.01:0,12,133	1/1:11,0:14:5.68:28,6,0	0/1:27,4:31:99:100,0,173	1/1:7,0:7:2.84:14,3,0
chr10	98381692	.	G	GCACACA	2022.91	PASS	AB=0.863;AC=30;AF=0.600;AN=50;BaseQRankSum=0.481;DP=622;FS=2.864;HRun=0;HaplotypeScore=137.7654;InbreedingCoeff=0.5244;MQ=72.37;MQ0=10;MQRankSum=-3.200;QD=5.53;ReadPosRankSum=-2.431;VQSLOD=2.3513;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:24.05:0,24,458	0/0:7,0:9:6.02:0,6,89	./.	./.	0/0:19,0:19:9.03:0,9,179	1/1:15,0:25:1.63:36,2,0	1/1:19,0:27:5.32:79,5,0	./.	1/1:14,4:18:9.03:233,9,0	0/0:18,0:17:1.29:0,1,57	0/0:20,0:21:12.04:0,12,207	1/1:26,0:25:17.99:244,18,0	1/1:17,1:18:15.91:293,16,0	1/1:9,5:15:6.02:191,6,0	1/1:11,7:25:3.01:96,3,0	0/1:16,4:23:86.03:86,0,101	0/0:17,0:21:18.05:0,18,287	0/0:22,0:22:12.47:0,12,445	1/1:14,0:15:0.94:2,1,0	1/1:13,0:18:3.21:39,3,0	0/1:44,0:43:44.93:123,0,45	1/1:14,0:13:9.03:168,9,0	1/1:9,2:11:3.01:96,3,0	1/1:34,1:41:8.55:172,9,0	0/0:13,0:13:15.04:0,15,256	1/1:18,0:18:8.86:49,9,0	1/1:12,0:19:21.06:287,21,0	0/0:9,0:9:3.90:0,4,53
chr10	98382255	.	T	TGGTTC	4560.23	PASS	AB=0.886;AC=16;AF=0.286;AN=56;BaseQRankSum=9.715;DP=523;FS=15.797;HRun=0;HaplotypeScore=123.4895;InbreedingCoeff=-0.0821;MQ=46.13;MQ0=26;MQRankSum=-5.482;QD=16.95;ReadPosRankSum=5.247;VQSLOD=3.4286;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,3:22:24.25:412,24,0	0/0:4,0:4:12.04:0,12,231	0/0:17,0:3:5.98:0,6,59	0/0:13,0:5:2.52:0,3,39	0/0:22,0:22:45.29:0,45,679	0/1:15,2:15:62.09:528,0,62	0/1:19,0:17:97.64:275,0,98	0/1:45,0:40:99:687,0,816	1/1:9,2:13:16.12:260,16,0	0/0:23,0:21:60.92:0,61,951	0/0:16,0:15:39.13:0,39,706	0/1:15,2:17:88.24:293,0,88	0/1:11,3:13:99:155,0,135	0/1:9,3:13:30.49:416,0,30	0/1:23,6:28:99:468,0,234	0/0:13,0:13:33.57:0,34,507	0/0:30,0:29:75.24:0,75,1316	0/1:9,3:8:24.25:249,0,24	0/0:25,0:23:68.51:0,69,970	0/0:25,0:25:67.26:0,67,1117	0/0:9,0:9:21.17:0,21,320	0/1:12,2:12:59.26:227,0,59	0/1:20,1:17:37.17:342,0,37	0/1:11,2:13:21.76:174,0,22	0/0:16,0:16:40.67:0,41,714	0/0:22,0:22:64.71:0,65,1024	0/0:19,0:18:35.07:0,35,502	0/1:13,0:13:73.60:74,0,317
chr10	98382289	.	T	TAG	4457.49	PASS	AC=20;AF=0.385;AN=52;BaseQRankSum=10.626;DP=379;FS=0.453;HRun=0;HaplotypeScore=75.1113;InbreedingCoeff=0.9562;MQ=45.50;MQ0=35;MQRankSum=-5.612;QD=35.66;ReadPosRankSum=2.253;VQSLOD=6.8950;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:10:24.03:0,24,282	0/0:5,0:5:12.04:0,12,196	./.	./.	0/0:14,0:14:36.12:0,36,587	1/1:0,13:12:33.11:487,33,0	1/1:1,16:16:39.13:554,39,0	0/0:26,0:25:75.21:0,75,1193	1/1:0,15:16:42.03:613,42,0	0/0:13,0:13:39.13:0,39,636	0/0:10,0:10:30.10:0,30,479	1/1:2,12:14:3.17:443,3,0	1/1:0,7:6:15.05:228,15,0	1/1:1,10:11:32.59:446,33,0	1/1:0,13:12:33.11:547,33,0	0/0:7,0:7:18.06:0,18,294	0/0:24,0:24:63.22:0,63,1025	0/0:9,0:7:20.96:0,21,191	0/0:10,0:10:30.07:0,30,461	0/0:17,0:17:45.14:0,45,732	0/0:18,0:17:42.14:0,42,682	1/1:0,14:12:30.10:507,30,0	1/1:0,9:7:21.07:322,21,0	1/1:0,11:11:21.07:311,21,0	0/0:8,0:8:18.06:0,18,293	0/0:14,0:14:42.13:0,42,660	0/0:13,0:13:39.13:0,39,624	0/0:7,0:7:12.04:0,12,196
chr10	98382291	.	GC	G	2216.75	PASS	AC=20;AF=0.385;AN=52;BaseQRankSum=11.768;DP=383;FS=0.947;HRun=2;HaplotypeScore=72.3316;InbreedingCoeff=0.9753;MQ=45.88;MQ0=34;MQRankSum=-4.149;QD=17.18;ReadPosRankSum=2.895;VQSLOD=3.9538;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:10:16.72:0,17,59	0/0:5,0:5:12.04:0,12,180	./.	./.	0/0:13,0:13:36.12:0,36,540	1/1:2,13:14:38.72:292,39,0	1/1:1,16:16:38.58:271,39,0	0/0:25,0:24:72.15:0,72,1018	1/1:0,16:16:39.05:317,39,0	0/0:13,0:13:39.13:0,39,585	0/0:10,0:10:30.10:0,30,440	1/1:2,12:14:28.49:265,28,0	1/1:0,7:6:14.91:118,15,0	1/1:0,10:11:31.26:225,31,0	1/1:0,13:12:32.92:305,33,0	0/0:8,0:8:21.53:0,22,295	0/0:24,0:24:62.80:0,63,909	0/0:6,0:5:9.49:0,9,33	0/0:10,0:10:30.05:0,30,404	0/0:16,0:16:45.15:0,45,674	0/0:20,0:19:48.15:0,48,698	1/1:0,14:12:29.95:288,30,0	1/1:0,9:7:20.80:169,21,0	1/1:2,11:13:23.07:178,23,0	0/0:8,0:8:21:0,21,287	0/0:14,0:14:42.14:0,42,629	0/0:13,0:13:36.07:0,36,513	0/0:7,0:7:12.04:0,12,180
chr10	98382292	.	C	CG	5076.10	PASS	AC=24;AF=0.462;AN=52;BaseQRankSum=12.862;DP=394;FS=3.971;HRun=1;HaplotypeScore=65.0232;InbreedingCoeff=0.9809;MQ=46.03;MQ0=33;MQRankSum=-4.710;QD=32.75;ReadPosRankSum=2.249;VQSLOD=4.6283;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:13:21.07:334,21,0	0/0:5,0:5:12.04:0,12,168	./.	./.	0/0:13,0:13:36.12:0,36,504	1/1:16,0:15:39.10:540,39,0	1/1:17,0:16:39.13:580,39,0	0/0:25,0:25:72.24:0,72,994	1/1:16,0:16:42.14:620,42,0	0/0:13,0:13:39.13:0,39,546	0/0:10,0:10:30.10:0,30,411	1/1:14,1:15:36.12:521,36,0	1/1:7,0:6:15.05:223,15,0	1/1:12,0:12:36.12:517,36,0	1/1:13,0:12:33.11:484,33,0	0/0:8,0:8:21.06:0,21,277	0/0:23,0:25:40.21:0,40,816	1/1:1,4:5:12.04:192,12,0	0/0:10,0:10:30.05:0,30,381	0/0:16,0:16:45.15:0,45,629	0/0:20,0:19:48.15:0,48,652	1/1:15,0:13:30.10:441,30,0	1/1:10,0:8:21.07:308,21,0	1/1:14,0:14:23.91:316,24,0	0/0:7,0:7:21.07:0,21,289	0/0:14,0:14:42.14:0,42,587	0/0:14,0:14:36.12:0,36,499	0/0:7,0:7:12.04:0,12,168
chr10	98382562	.	TG	T	1539.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.834;DP=655;FS=0.000;HRun=2;HaplotypeScore=66.8933;InbreedingCoeff=0.9996;MQ=73.39;MQ0=0;MQRankSum=-1.636;QD=32.08;ReadPosRankSum=1.120;VQSLOD=3.4145;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,48:48:99:1635,126,0	0/0:11,0:11:33.11:0,33,494	0/0:15,0:14:36.09:0,36,504	0/0:24,0:23:49.79:0,50,896	0/0:23,0:23:66.22:0,66,987	0/0:22,0:22:66.14:0,66,961	0/0:34,0:34:99:0,102,1529	0/0:23,0:23:66.22:0,66,972	0/0:22,0:22:63.21:0,63,944	0/0:22,0:22:66.22:0,66,988	0/0:23,0:23:66.22:0,66,989	0/0:29,0:29:84.27:0,84,1237	0/0:27,0:27:81.25:0,81,1167	0/0:20,0:20:60.20:0,60,897	0/0:29,0:29:87.29:0,87,1303	0/0:24,0:24:72.22:0,72,1042	0/0:23,0:23:69.23:0,69,1032	0/0:16,0:16:45.14:0,45,654	0/0:18,0:18:51.13:0,51,703	0/0:26,0:26:78.26:0,78,1161	0/0:35,0:35:99:0,105,1530	0/0:23,0:23:66.21:0,66,965	0/0:21,0:21:60.20:0,60,894	0/0:21,0:20:63.21:0,63,944	0/0:26,0:26:78.25:0,78,1148	0/0:17,0:17:51.17:0,51,764	0/0:16,0:16:48.16:0,48,710	0/0:17,0:17:45.14:0,45,652
chr10	98383388	.	A	AG	13332.95	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=19.356;DP=811;FS=5.269;HRun=1;HaplotypeScore=140.9621;InbreedingCoeff=0.9847;MQ=88.24;MQ0=0;MQRankSum=-2.759;QD=40.77;ReadPosRankSum=0.213;VQSLOD=4.0899;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,181,2321	0/0:13,0:13:39.13:0,39,506	0/0:37,0:37:99:0,105,1320	0/0:26,0:26:20.60:0,21,732	0/0:35,0:35:96.31:0,96,1247	1/1:0,21:21:63.21:944,63,0	1/1:0,34:34:99:1529,102,0	1/1:4,36:40:99:1723,117,0	1/1:1,27:28:78.26:1169,78,0	0/0:28,0:28:81.25:0,81,1027	0/0:23,0:23:69.21:0,69,882	1/1:4,29:33:87.25:1278,87,0	1/1:3,23:26:69.23:1028,69,0	1/1:1,27:28:72.24:1079,72,0	1/1:4,33:37:93.31:1394,93,0	0/0:26,0:26:78.25:0,78,1013	0/0:37,0:37:99:0,108,1402	0/0:32,0:32:96.31:0,96,1244	0/0:22,0:22:63.20:0,63,818	0/0:16,0:16:42.61:0,43,546	0/0:50,0:50:99:0,144,1839	1/1:1,23:24:69.23:1032,69,0	1/1:0,20:20:57.10:854,57,0	1/1:3,28:31:81.27:1214,81,0	0/0:21,0:21:60.17:0,60,752	0/0:26,0:26:66.21:0,66,844	0/0:30,0:29:90.26:0,90,1137	1/1:2,3:5:6.02:90,6,0
chr10	98384029	.	T	TG	8808.94	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=11.104;DP=712;FS=3.636;HRun=2;HaplotypeScore=98.4741;InbreedingCoeff=0.9954;MQ=75.26;MQ0=0;MQRankSum=-1.726;QD=37.17;ReadPosRankSum=4.685;VQSLOD=5.0425;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,129,1564	0/0:17,0:17:51.16:0,51,632	0/0:37,0:32:83.61:0,84,989	0/0:41,0:39:94.10:0,94,1086	0/0:29,0:29:75.23:0,75,927	1/1:0,17:17:48.16:691,48,0	1/1:3,27:30:75.25:1080,75,0	0/0:28,0:28:84.26:0,84,1040	1/1:1,19:20:54.14:746,54,0	0/0:28,0:28:81.25:0,81,993	0/0:24,0:24:69.20:0,69,843	1/1:2,29:32:84.28:1205,84,0	1/1:1,19:20:48.16:691,48,0	1/1:0,19:19:54.18:778,54,0	1/1:2,12:14:33.11:466,33,0	0/0:23,0:23:69.19:0,69,830	0/0:25,0:24:75.14:0,75,871	0/0:20,0:20:57.18:0,57,707	0/0:16,0:16:42.12:0,42,508	0/0:25,0:25:72.23:0,72,892	0/0:26,0:26:75.22:0,75,917	1/1:3,26:29:72.24:1037,72,0	1/1:2,13:15:39.13:560,39,0	1/1:2,39:41:99:1555,108,0	0/0:33,0:33:93.29:0,93,1153	0/0:27,0:27:75.23:0,75,930	0/0:23,0:23:66.21:0,66,818	0/0:6,0:6:12.04:0,12,149
chr10	98384263	.	GT	G	5926.84	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=12.321;DP=605;FS=8.984;HRun=8;HaplotypeScore=58.1546;InbreedingCoeff=0.9973;MQ=82.60;MQ0=0;MQRankSum=-1.070;QD=24.09;ReadPosRankSum=2.745;VQSLOD=5.4264;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.23:0,78,930	0/0:6,0:6:18.05:0,18,207	0/0:19,0:19:51.07:0,51,563	0/0:15,0:15:18.05:0,18,202	0/0:31,0:31:84.24:0,84,993	1/1:0,17:17:48.08:463,48,0	1/1:0,25:25:63.10:608,63,0	1/1:10,28:38:84.10:801,84,0	1/1:0,8:8:24.04:232,24,0	0/0:24,0:24:60.18:0,60,715	0/0:24,0:24:63.18:0,63,749	1/1:2,19:21:51.08:492,51,0	1/1:1,29:30:81:782,81,0	1/1:0,10:10:27.04:261,27,0	1/1:6,22:28:57.08:550,57,0	0/0:23,0:23:63.18:0,63,749	0/0:36,0:36:99:0,99,1171	0/0:20,0:20:51.16:0,51,616	0/0:24,0:25:63.17:0,63,731	0/0:17,0:17:48.14:0,48,568	0/0:19,0:19:51.14:0,51,604	1/1:0,22:22:60.09:579,60,0	1/1:2,16:18:45.07:434,45,0	1/1:2,14:16:39.06:377,39,0	0/0:18,0:18:45.13:0,45,535	0/0:27,0:28:72.07:0,72,836	0/0:27,0:27:72.22:0,72,869	1/1:1,12:13:36.06:348,36,0
chr10	98385093	.	ATC	A	9213.49	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=14.013;DP=700;FS=7.926;HRun=0;HaplotypeScore=88.5572;InbreedingCoeff=0.9991;MQ=77.05;MQ0=5;MQRankSum=-2.062;QD=26.55;ReadPosRankSum=3.623;VQSLOD=5.6782;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,36:42:87.27:1077,87,0	0/0:19,0:19:25.57:0,26,708	0/0:27,0:24:33.73:0,34,492	0/0:36,0:32:33.39:0,33,671	0/0:30,0:30:78.16:0,78,1236	1/1:1,21:22:51.16:632,51,0	1/1:5,13:18:33.10:409,33,0	1/1:9,27:37:40.67:783,41,0	1/1:1,19:19:48.15:595,48,0	0/0:32,1:33:53.10:0,53,1383	0/0:14,0:14:39.13:0,39,639	1/1:0,18:18:48.15:595,48,0	1/1:5,24:29:63.20:781,63,0	1/1:5,20:25:51.16:632,51,0	1/1:2,24:26:57.18:707,57,0	0/0:16,0:16:42.14:0,42,688	0/0:33,0:33:90.23:0,90,1371	1/1:5,18:23:39.12:482,39,0	0/0:18,0:18:33.08:0,33,438	0/0:20,1:21:23:0,23,896	0/0:29,0:29:75.22:0,75,1169	1/1:2,26:28:78.25:967,78,0	1/1:0,20:21:50.82:586,51,0	1/1:4,20:24:51.16:632,51,0	0/0:22,0:22:54.18:0,54,884	0/0:28,1:29:35.02:0,35,1051	0/0:23,2:25:32.02:0,32,1012	1/1:1,12:13:27.08:335,27,0
chr10	98386865	.	ATCTCTCTCTCTCTCTC	A	53.80	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.278;DP=407;FS=0.000;HRun=0;HaplotypeScore=166.2237;InbreedingCoeff=0.4156;MQ=73.58;MQ0=18;MQRankSum=-1.988;QD=1.68;ReadPosRankSum=-1.466;VQSLOD=2.3350;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,8:19:0.89:2,1,0	0/0:3,0:3:7.27:0,7,338	0/0:21,0:9:3.01:0,3,84	0/0:33,0:21:5.04:0,5,108	0/0:16,0:19:18.06:0,18,987	0/0:11,0:10:0.19:0,0,637	0/0:11,0:9:24.08:0,24,808	0/0:38,0:37:25.90:0,26,964	0/0:8,0:8:15.05:0,15,688	0/0:10,0:10:18.06:0,18,950	0/0:14,0:13:18.05:0,18,799	0/0:10,0:10:15.04:0,15,658	0/0:8,0:7:12.04:0,12,447	0/0:10,0:10:18.06:0,18,743	0/0:12,0:11:21.07:0,21,929	0/0:8,0:7:15.04:0,15,678	0/0:23,0:23:39.05:0,39,1915	1/1:8,4:12:3.01:131,3,0	0/0:14,0:14:24.08:0,24,1107	0/0:15,0:15:21.07:0,21,1065	0/0:15,0:14:33.08:0,33,1692	0/0:10,0:17:15.04:0,15,706	0/0:11,0:11:15.05:0,15,821	0/0:16,0:15:42.14:0,42,2019	0/0:6,0:6:12.04:0,12,645	0/0:18,0:17:27.09:0,27,1265	0/0:4,0:4:6.02:0,6,261	0/0:20,0:18:15.05:0,15,814
chr10	98386908	.	TCA	T	221.83	PASS	AB=0.965;AC=8;AF=0.167;AN=48;BaseQRankSum=-2.750;DP=387;FS=25.123;HRun=0;HaplotypeScore=78.9726;InbreedingCoeff=0.1442;MQ=45.19;MQ0=42;MQRankSum=2.451;QD=1.69;ReadPosRankSum=0.986;VQSLOD=0.0618;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:23:2.58:111,0,3	0/1:5,0:4:16.01:33,0,16	./.	./.	0/0:14,0:11:0.73:0,1,42	0/0:18,0:16:14.92:0,15,130	0/0:30,0:25:26.84:0,27,214	./.	0/0:7,0:7:5.99:0,6,49	0/0:7,0:6:3:0,3,27	0/0:10,0:8:5.99:0,6,50	0/0:14,0:13:5.99:0,6,50	0/0:7,0:6:2.88:0,3,15	0/0:10,0:9:5.99:0,6,50	0/0:13,0:12:5.99:0,6,50	0/0:7,0:5:5.94:0,6,43	0/1:21,0:21:0.68:1,0,142	1/1:18,0:13:14.94:116,15,0	0/1:11,4:13:7.10:69,0,7	0/0:11,0:11:8.99:0,9,75	0/1:32,0:27:7.02:7,0,86	0/0:11,0:10:5.85:0,6,56	0/1:12,0:11:0.03:0,0,0	0/0:27,0:24:21.90:0,22,187	0/0:9,0:9:2.44:0,2,24	0/0:18,0:16:30.17:0,30,224	0/0:12,0:11:23.96:0,24,196	./.
chr10	98387453	.	G	GA	985.72	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.386;DP=650;FS=0.666;HRun=8;HaplotypeScore=72.6262;InbreedingCoeff=0.9975;MQ=71.95;MQ0=0;MQRankSum=-0.733;QD=25.94;ReadPosRankSum=-0.047;VQSLOD=4.1840;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:60.18:692,60,0	0/0:14,0:14:33.01:0,33,302	0/0:28,0:25:21.49:0,21,325	0/0:19,0:15:29.67:0,30,272	0/0:24,0:24:66.03:0,66,604	0/0:23,0:23:63.03:0,63,577	0/0:20,0:20:60.03:0,60,549	0/0:28,0:28:50.99:0,51,463	0/0:23,0:23:66.04:0,66,604	0/0:25,0:25:66.03:0,66,604	0/0:20,0:20:57.03:0,57,522	0/0:23,0:23:63.03:0,63,577	0/0:23,0:23:63.01:0,63,572	0/0:22,0:22:60.01:0,60,544	0/0:25,0:25:69.03:0,69,631	0/0:23,0:23:60.02:0,60,549	0/0:25,0:25:66.03:0,66,604	1/1:3,12:15:36.11:415,36,0	0/0:19,0:19:47.99:0,48,429	0/0:33,0:33:93.02:0,93,842	0/0:19,0:19:54.03:0,54,494	0/0:26,0:26:63.03:0,63,576	0/0:23,0:23:63.03:0,63,576	0/0:14,0:14:36.02:0,36,329	0/0:23,0:23:60.01:0,60,545	0/0:32,0:33:79.82:0,80,712	0/0:36,0:33:99:0,102,933	0/0:20,0:20:57.03:0,57,522
chr10	98388202	.	T	TAA	5870.09	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=12.449;DP=546;FS=20.315;HRun=10;HaplotypeScore=81.6535;InbreedingCoeff=0.9828;MQ=77.26;MQ0=0;MQRankSum=0.845;QD=34.73;ReadPosRankSum=2.666;VQSLOD=3.9461;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:24:59.31:0,59,554	0/0:10,0:10:18:0,18,175	0/0:12,0:13:7.59:0,8,45	0/0:14,0:14:13.24:0,13,124	0/0:25,0:26:68.88:0,69,683	1/1:3,27:31:66.22:983,66,0	1/1:4,9:14:20.83:297,21,0	0/0:29,0:29:63.07:0,63,641	1/1:1,13:15:39.13:581,39,0	0/0:26,0:26:60.08:0,60,605	0/0:21,0:21:57.11:0,57,573	1/1:2,7:10:25.87:361,26,0	1/1:1,14:17:44.12:600,44,0	1/1:3,10:13:30.07:423,30,0	1/1:3,17:21:54.18:791,54,0	0/0:19,0:19:42.04:0,42,427	0/0:22,0:23:59.86:0,60,592	0/0:20,0:21:56.80:0,57,550	0/0:29,0:29:54.05:0,54,677	0/0:23,0:23:55.89:0,56,569	0/0:15,0:15:39.08:0,39,397	1/1:2,11:13:30.06:423,30,0	1/1:2,14:17:48.16:694,48,0	1/1:1,16:18:48.16:716,48,0	0/0:18,0:18:48.10:0,48,488	0/0:21,0:22:56.83:0,57,561	0/0:31,0:31:63.80:0,64,823	0/0:12,0:13:38.78:0,39,361
chr10	98388789	.	A	AC	3121.21	PASS	AB=0.574;AC=23;AF=0.411;AN=56;BaseQRankSum=8.491;DP=499;FS=5.954;HRun=9;HaplotypeScore=73.1587;InbreedingCoeff=0.6090;MQ=75.90;MQ0=0;MQRankSum=-2.091;QD=13.01;ReadPosRankSum=-0.515;VQSLOD=3.3256;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,15:20:4.01:262,4,0	0/0:8,0:8:20.49:0,20,166	0/0:14,0:15:14.27:0,14,148	0/0:22,0:21:16.25:0,16,213	0/0:12,0:12:26.99:0,27,234	0/1:8,14:22:30.04:376,0,30	1/1:8,16:24:13.05:365,13,0	1/1:15,1:25:26.46:153,26,0	1/1:4,11:15:4.14:262,4,0	0/0:29,0:30:68:0,68,576	0/0:13,0:13:35.99:0,36,312	0/1:3,8:11:1.99:208,0,2	0/1:3,9:12:7.94:148,0,8	0/1:5,12:16:48.52:172,0,49	1/1:6,16:22:1.05:239,1,0	0/0:16,0:17:41.01:0,41,344	0/0:26,0:26:71.98:0,72,625	1/1:1,21:22:44.95:498,45,0	0/0:17,0:17:41.95:0,42,355	0/0:20,0:20:44.97:0,45,386	0/0:30,0:30:74.96:0,75,649	1/1:6,5:11:14.99:145,15,0	1/1:1,12:13:14.78:159,15,0	0/1:1,11:12:1.96:208,0,2	0/0:11,0:11:26.98:0,27,234	0/0:23,0:23:38.30:0,38,468	0/0:14,0:15:35.03:0,35,292	1/1:4,2:14:17.38:122,17,0
chr10	98390035	.	TC	T	2932.30	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=0.238;DP=625;FS=0.000;HRun=1;HaplotypeScore=76.5517;InbreedingCoeff=0.9991;MQ=79.04;MQ0=0;MQRankSum=-4.400;QD=38.58;ReadPosRankSum=-4.227;VQSLOD=2.3474;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:48.16:671,48,0	0/0:16,0:16:48.16:0,48,767	0/0:19,0:19:54.15:0,54,811	0/0:17,0:17:51.17:0,51,813	0/0:29,0:29:87.24:0,87,1339	0/0:27,0:27:76.94:0,77,513	0/0:19,0:19:56.13:0,56,364	1/1:0,41:41:99:1713,123,0	0/0:14,0:14:41.38:0,41,274	0/0:26,0:26:78.26:0,78,1222	0/0:21,0:21:57.17:0,57,864	0/0:28,0:28:55.96:0,56,487	0/0:21,0:21:37.42:0,37,384	0/0:20,0:20:53.61:0,54,344	0/0:30,0:30:85.30:0,85,574	0/0:21,0:21:63.17:0,63,973	0/0:23,0:23:66.22:0,66,1048	1/1:0,9:8:24.08:331,24,0	0/0:23,0:23:69.22:0,69,1077	0/0:32,0:32:96.31:0,96,1508	0/0:23,0:23:69.22:0,69,1078	0/0:21,0:21:58.03:0,58,384	0/0:24,0:24:53.58:0,54,445	0/0:23,0:23:65.16:0,65,444	0/0:14,0:14:42.14:0,42,671	0/0:28,0:28:84.26:0,84,1292	0/0:30,0:30:90.27:0,90,1381	1/1:0,9:9:27.09:378,27,0
chr10	98390159	.	C	CTTTG	17700.43	PASS	AB=0.957;AC=29;AF=0.518;AN=56;BaseQRankSum=-7.722;DP=660;FS=0.642;HRun=0;HaplotypeScore=98.2246;InbreedingCoeff=0.9306;MQ=89.00;MQ0=0;MQRankSum=-7.312;QD=53.64;ReadPosRankSum=1.843;VQSLOD=6.1236;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:27:72.21:1722,72,0	0/0:12,0:12:36.12:0,36,662	0/0:35,0:35:86.75:0,87,1465	0/0:17,0:17:48.10:0,48,835	0/0:27,0:27:75.26:0,75,1379	1/1:2,22:24:60.21:1583,60,0	1/1:2,10:12:18.06:475,18,0	1/1:35,0:35:93.30:2241,93,0	1/1:2,13:15:33.11:871,33,0	0/0:29,0:29:81.26:0,81,1435	0/0:22,0:22:63.17:0,63,1067	1/1:2,21:24:57.20:1503,57,0	1/1:5,14:20:36.12:950,36,0	1/1:2,19:24:54.19:1425,54,0	1/1:3,22:27:54.19:1425,54,0	0/1:21,1:22:13.02:13,0,987	0/0:36,0:36:91.79:0,92,1511	1/1:20,0:18:33.09:797,33,0	0/0:24,0:23:60.21:0,60,1103	0/0:29,0:29:78.27:0,78,1424	0/0:15,0:15:36.12:0,36,662	1/1:8,21:29:57:1377,57,0	1/1:2,18:20:54.19:1423,54,0	1/1:2,15:18:42.14:1109,42,0	0/0:35,0:35:90.29:0,90,1618	0/0:27,0:27:75.23:0,75,1296	0/0:22,0:22:60.16:0,60,1009	1/1:11,0:11:30.10:787,30,0
chr10	98390163	.	G	GTT	6116.81	PASS	AB=0.928;AC=23;AF=0.411;AN=56;BaseQRankSum=18.490;DP=658;FS=6.759;HRun=3;HaplotypeScore=115.3348;InbreedingCoeff=0.6438;MQ=88.00;MQ0=0;MQRankSum=-6.242;QD=19.80;ReadPosRankSum=3.060;VQSLOD=2.4292;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,21:27:31.39:821,31,0	0/0:14,0:14:36.12:0,36,551	0/0:32,0:32:93.30:0,93,1385	0/0:18,0:18:48.16:0,48,725	0/0:27,0:27:81.27:0,81,1236	0/1:27,0:26:43:392,0,43	1/1:11,0:11:20.90:158,21,0	0/1:17,22:39:99:823,0,160	0/1:16,0:16:21.98:283,0,22	0/0:32,0:32:93.30:0,93,1370	0/0:23,0:23:69.20:0,69,1012	0/1:25,0:25:6.53:374,0,7	1/1:19,0:19:47.82:381,48,0	1/1:23,0:23:53.79:414,54,0	1/1:27,0:27:19.82:408,20,0	0/0:23,0:23:43.16:0,43,918	0/0:34,0:34:96.28:0,96,1422	1/1:8,9:15:39.09:517,39,0	0/0:23,0:22:63.21:0,63,963	0/0:28,0:28:81.27:0,81,1233	0/0:15,0:15:42.13:0,42,620	0/1:26,0:26:95.18:379,0,95	1/1:20,0:20:32.85:389,33,0	1/1:20,0:20:22.91:326,23,0	0/0:33,0:33:93.32:0,93,1421	0/0:26,0:26:78.26:0,78,1194	0/0:21,0:21:60.19:0,60,893	1/1:1,10:11:33.11:452,33,0
chr10	98390165	.	G	GTA	2442.11	PASS	AB=0.627;AC=7;AF=0.125;AN=56;BaseQRankSum=7.389;DP=636;FS=7.247;HRun=0;HaplotypeScore=121.4160;InbreedingCoeff=0.8142;MQ=90.88;MQ0=0;MQRankSum=-10.658;QD=27.75;ReadPosRankSum=-1.483;VQSLOD=4.7672;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:24:47.14:856,47,0	0/0:14,0:14:42.11:0,42,636	0/0:33,0:33:96.32:0,96,1508	0/0:21,0:21:54.15:0,54,826	0/0:28,0:28:81.28:0,81,1316	0/0:27,0:26:37.45:0,37,205	0/0:9,0:9:9.14:0,9,42	0/1:15,22:37:15.51:878,0,16	0/0:14,0:14:19.39:0,19,100	0/0:31,0:31:93.30:0,93,1453	0/0:23,0:23:69.21:0,69,1076	0/0:24,0:24:24.87:0,25,121	0/0:15,0:15:14.76:0,15,55	0/0:22,0:22:21.19:0,21,53	0/0:25,0:25:27.71:0,28,104	0/0:22,0:22:64.72:0,65,952	0/0:33,0:33:96.30:0,96,1508	1/1:7,9:14:29.59:416,30,0	0/0:24,0:23:66.21:0,66,1045	0/0:29,0:29:84.26:0,84,1315	0/0:16,0:16:45.12:0,45,682	0/0:23,0:23:26.32:0,26,229	0/0:19,0:19:16.29:0,16,62	0/0:20,0:20:24.64:0,25,94	0/0:31,0:31:93.32:0,93,1514	0/0:26,0:26:78.27:0,78,1268	0/0:19,0:19:57.19:0,57,915	1/1:0,10:10:30.10:441,30,0
chr10	98391858	.	TC	T	2681.16	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.613;DP=681;FS=0.000;HRun=2;HaplotypeScore=64.0713;InbreedingCoeff=0.9968;MQ=87.58;MQ0=0;MQRankSum=-4.396;QD=34.37;ReadPosRankSum=2.876;VQSLOD=4.0012;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,54:54:99:1946,150,0	0/0:8,0:8:24.08:0,24,359	0/0:19,0:19:51.12:0,51,737	0/0:27,0:27:69.12:0,69,967	0/0:16,0:16:48.12:0,48,675	0/0:18,0:18:54.16:0,54,770	0/0:24,0:24:72.20:0,72,1032	0/0:30,0:30:90.28:0,90,1295	0/0:33,0:33:99:0,99,1456	0/0:19,0:19:57.16:0,57,793	0/0:19,0:19:51.16:0,51,742	0/0:23,0:23:69.23:0,69,1011	0/0:21,0:21:63.21:0,63,940	0/0:29,0:29:87.27:0,87,1261	0/0:25,0:25:75.20:0,75,1069	0/0:26,0:26:78.26:0,78,1150	0/0:39,0:39:99:0,114,1708	1/1:0,24:24:66.21:856,66,0	0/0:25,0:25:68.89:0,69,939	0/0:25,0:25:75.18:0,75,1039	0/0:46,0:46:99:0,138,2044	0/0:28,0:28:81.27:0,81,1212	0/0:13,0:13:39.13:0,39,581	0/0:21,0:21:63.17:0,63,897	0/0:28,0:28:84.26:0,84,1219	0/0:20,0:20:57.15:0,57,777	0/0:14,0:14:39.12:0,39,565	0/0:7,0:7:21.06:0,21,294
chr10	98392377	.	CTCT	C	959.87	PASS	AB=1.000;AC=25;AF=0.521;AN=48;BaseQRankSum=7.477;DP=381;FS=9.160;HRun=0;HaplotypeScore=63.5877;InbreedingCoeff=0.7541;MQ=58.44;MQ0=21;MQRankSum=-4.387;QD=5.93;ReadPosRankSum=-1.194;VQSLOD=0.4531;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:4:9.03:0,9,178	0/0:19,0:9:18.02:0,18,267	0/0:22,0:11:3.18:0,3,195	0/0:12,0:12:33.11:0,33,645	./.	1/1:11,0:6:9.03:126,9,0	1/1:21,0:21:11.90:83,12,0	1/1:12,0:10:9.03:109,9,0	0/0:11,0:11:21.06:0,21,337	0/0:18,0:18:33.11:0,33,649	1/1:7,0:5:3.01:42,3,0	1/1:7,0:3:6.02:84,6,0	1/1:13,0:8:15:172,15,0	1/1:21,0:20:12.04:155,12,0	1/1:15,0:15:5.95:42,6,0	0/0:17,0:17:32.98:0,33,544	1/1:12,0:12:11.90:83,12,0	0/1:11,0:11:1.96:2,0,131	0/0:15,0:15:21.03:0,21,376	0/0:10,0:9:15.05:0,15,294	1/1:2,0:2:3.01:42,3,0	./.	./.	0/0:25,0:24:33.33:0,33,1055	1/1:13,0:13:27.36:180,27,0	0/0:15,0:15:36.10:0,36,638	1/1:17,0:17:2.98:21,3,0
chr10	98392383	.	TTCTTCTTCTTCTTCTTCTTCCTCTC	T	3431.54	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=7.387;DP=359;FS=5.226;HRun=0;HaplotypeScore=165.8755;InbreedingCoeff=0.7596;MQ=57.93;MQ0=23;MQRankSum=-4.995;QD=48.33;ReadPosRankSum=0.091;VQSLOD=2.3835;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:3,0:3:9.03:0,9,704	0/0:19,0:9:27.09:0,27,1545	0/0:22,0:11:22.31:0,22,1030	0/0:11,0:11:33.11:0,33,2550	0/0:14,0:10:3.01:0,3,74	0/0:12,0:7:15.05:0,15,631	1/1:19,0:18:35.58:907,36,0	0/0:11,0:9:15.04:0,15,670	0/0:11,0:11:30.10:0,30,1825	0/0:17,0:17:45.14:0,45,2978	0/0:4,0:2:6.02:0,6,312	0/0:7,0:3:9.03:0,9,360	0/0:13,0:8:21.07:0,21,836	0/0:21,0:20:21.07:0,21,986	1/1:3,12:14:6.02:407,6,0	0/0:17,0:17:48.16:0,48,3094	1/1:12,0:12:12.04:607,12,0	0/0:10,0:10:24.08:0,24,1443	0/0:15,0:15:36.12:0,36,2129	0/0:8,0:7:21.07:0,21,1404	0/0:2,0:2:3.01:0,3,182	0/0:3,0:3:9.03:0,9,238	0/0:10,0:7:6.02:0,6,151	0/0:24,0:23:69.24:0,69,4701	1/1:12,0:12:27.61:1327,28,0	0/0:15,0:15:42.14:0,42,2859	1/1:6,0:13:3.01:184,3,0
chr10	98392386	.	TTCTTCTTCTTCTTCTTC	T	3088.57	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=7.559;DP=337;FS=5.059;HRun=0;HaplotypeScore=114.2516;InbreedingCoeff=0.7701;MQ=56.58;MQ0=23;MQRankSum=-5.074;QD=55.15;ReadPosRankSum=-0.246;VQSLOD=3.0822;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:3,0:3:9.03:0,9,704	0/0:19,0:9:27.09:0,27,1545	0/0:21,0:10:22.88:0,23,1032	0/0:11,0:11:33.11:0,33,2508	0/0:14,0:10:3.01:0,3,74	0/0:12,0:7:18.06:0,18,662	1/1:1,13:13:36.90:910,37,0	0/0:11,0:9:15.04:0,15,592	0/0:11,0:11:33.11:0,33,1940	0/0:15,0:15:45.14:0,45,2962	0/0:4,0:2:6.02:0,6,312	0/0:7,0:3:9.03:0,9,360	0/0:12,0:7:21.07:0,21,836	0/0:22,0:21:21.07:0,21,884	1/1:13,0:12:6.02:259,6,0	0/0:18,0:18:51.18:0,51,3104	1/1:0,11:11:12.04:607,12,0	0/0:9,0:9:24.08:0,24,1443	0/0:12,0:12:36.12:0,36,2115	0/0:8,0:7:21.07:0,21,1304	0/0:2,0:2:3.01:0,3,154	0/0:3,0:3:9.03:0,9,238	0/0:12,0:9:9.03:0,9,257	0/0:23,0:23:69.24:0,69,4688	1/1:1,10:11:29.22:1329,29,0	0/0:14,0:14:42.14:0,42,2802	1/1:7,0:7:3.01:138,3,0
chr10	98392559	.	AC	A	3720.66	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.513;DP=432;FS=14.246;HRun=3;HaplotypeScore=45.3099;InbreedingCoeff=0.9713;MQ=76.48;MQ0=0;MQRankSum=-2.226;QD=34.13;ReadPosRankSum=-0.978;VQSLOD=2.0663;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:51.16:632,51,0	0/0:8,0:8:24.08:0,24,346	0/0:17,0:16:39.13:0,39,561	0/0:18,0:17:45.12:0,45,626	0/0:15,0:15:39.12:0,39,543	0/0:17,0:17:45.15:0,45,647	0/0:14,0:14:39.12:0,39,543	1/1:1,25:26:75.16:875,75,0	0/0:14,0:14:36.08:0,36,495	0/0:10,0:10:27.09:0,27,388	0/0:12,0:12:33.11:0,33,475	0/0:7,0:7:21.07:0,21,296	0/0:11,0:11:30.04:0,30,388	0/0:8,0:8:21.07:0,21,294	0/0:21,0:21:57.19:0,57,819	0/0:17,0:16:51.17:0,51,733	0/0:29,0:29:87.22:0,87,1207	1/1:0,18:18:51.16:632,51,0	0/0:8,0:8:18.06:0,18,259	0/0:11,0:11:30.10:0,30,432	0/0:21,0:21:63.21:0,63,907	0/0:2,0:2:6.02:0,6,86	0/0:14,0:14:42.14:0,42,603	0/0:14,0:14:36.12:0,36,518	0/0:18,0:18:48:0,48,691	1/1:1,24:25:72.21:875,72,0	0/0:17,0:17:48.16:0,48,687	1/1:0,19:19:57.18:707,57,0
chr10	98392806	.	CGTGTGT	C	596.98	PASS	AB=0.680;AC=23;AF=0.500;AN=46;BaseQRankSum=4.754;DP=474;FS=0.000;HRun=0;HaplotypeScore=99.1718;InbreedingCoeff=0.5148;MQ=67.82;MQ0=16;MQRankSum=-4.698;QD=3.26;ReadPosRankSum=0.348;VQSLOD=1.5660;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:28,0:18:0:0,0,0	0/0:16,0:18:18.06:0,18,446	0/0:20,0:20:1.25:0,1,3	1/1:24,4:27:3.01:42,3,0	./.	1/1:12,5:16:9.03:180,9,0	0/0:14,0:14:2.04:0,2,6	0/0:10,0:9:9.03:0,9,166	1/1:10,0:10:2.90:16,3,0	1/1:8,2:11:5.90:83,6,0	1/1:9,4:13:3.01:60,3,0	1/1:6,1:9:5.89:84,6,0	1/1:8,0:10:5.87:20,6,0	0/0:30,0:28:39.13:0,39,691	0/1:9,0:15:32.84:33,0,71	0/0:19,0:19:6.02:0,6,170	0/0:12,0:12:6.02:0,6,109	0/0:33,0:30:24.08:0,24,448	1/1:14,0:15:8.51:88,9,0	./.	1/1:26,6:30:3.01:60,3,0	0/0:12,0:12:9.03:0,9,125	1/1:11,0:11:3.01:42,3,0	0/0:14,0:16:10.28:0,10,152	1/1:8,0:8:3.01:42,3,0
chr10	98393151	.	ATGTGTGTG	A	2109.41	PASS	AB=0.771;AC=3;AF=0.054;AN=56;BaseQRankSum=6.057;DP=852;FS=3.083;HRun=0;HaplotypeScore=226.6133;InbreedingCoeff=-0.0567;MQ=59.31;MQ0=7;MQRankSum=-5.191;QD=16.74;ReadPosRankSum=-1.633;VQSLOD=2.7433;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:57:99:0,102,1562	0/0:10,0:10:24.08:0,24,917	0/0:50,0:27:54.14:0,54,1027	0/0:61,0:30:57.59:0,58,1378	0/0:25,0:25:60.66:0,61,2182	0/0:20,0:20:51.16:0,51,1952	0/0:36,0:36:90.27:0,90,3191	0/1:50,23:73:99:1070,0,1595	0/0:22,0:24:51.13:0,51,1789	0/0:32,0:32:90.26:0,90,3223	0/0:19,0:19:57.18:0,57,1915	0/0:19,0:19:45.15:0,45,1783	0/0:23,0:23:63.21:0,63,2353	0/0:26,0:26:66.19:0,66,2593	0/0:26,0:26:63.03:0,63,2212	0/0:35,0:37:80.83:0,81,1450	0/0:29,0:31:67.36:0,67,2803	0/0:15,0:27:63.08:0,63,1096	0/0:15,0:16:42.13:0,42,1341	0/0:29,0:29:60.17:0,60,2369	0/0:42,0:42:99:0,102,3329	0/0:27,0:27:69.22:0,69,2413	0/0:13,0:13:30.10:0,30,1207	0/0:35,0:35:84.23:0,84,3256	0/0:15,0:15:36.11:0,36,1385	0/1:26,14:39:99:927,0,974	0/0:23,0:24:72.18:0,72,2641	0/1:10,3:13:99:213,0,302
chr10	98393676	.	A	ATG	1963.99	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.252;DP=792;FS=14.882;HRun=0;HaplotypeScore=105.7951;InbreedingCoeff=0.9444;MQ=67.36;MQ0=4;MQRankSum=-1.019;QD=22.57;ReadPosRankSum=3.130;VQSLOD=3.4720;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,45:57:54.78:1385,55,0	0/0:4,0:4:6.02:0,6,74	0/0:26,0:22:44.98:0,45,517	0/0:33,0:27:39.66:0,40,525	0/0:32,0:32:78.23:0,78,947	0/0:20,0:20:45.13:0,45,541	0/0:25,0:25:63.20:0,63,775	0/0:35,0:36:84.07:0,84,977	0/0:25,0:25:63.20:0,63,775	0/0:29,0:29:57.18:0,57,702	0/0:27,0:27:72.19:0,72,850	0/0:30,0:30:78.23:0,78,946	0/0:29,0:29:75.23:0,75,923	0/0:31,0:31:75.19:0,75,885	0/0:37,0:37:95.77:0,96,1141	0/0:38,0:38:93.28:0,93,1132	0/0:32,0:32:60.96:0,61,974	1/1:9,20:28:42.39:701,42,0	0/0:22,0:22:51.15:0,51,616	0/0:27,0:27:56.39:0,56,672	0/0:24,0:24:48.13:0,48,576	0/0:34,0:34:90.26:0,90,1084	0/0:12,0:13:29.92:0,30,346	0/0:48,0:48:99:0,117,1439	0/0:19,0:19:48.15:0,48,591	0/0:35,0:35:90.28:0,90,1098	0/0:20,0:19:45.11:0,45,538	0/0:8,0:8:18.06:0,18,221
chr10	98393995	.	G	GA	497.99	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.363;DP=527;FS=4.111;HRun=9;HaplotypeScore=58.1654;InbreedingCoeff=0.7915;MQ=87.54;MQ0=0;MQRankSum=-1.073;QD=19.15;ReadPosRankSum=-2.881;VQSLOD=3.0248;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:95.95:0,96,830	0/0:2,0:2:6:0,6,52	0/0:27,0:27:46.26:0,46,364	0/0:15,0:14:26.92:0,27,230	0/0:21,0:21:50.98:0,51,443	0/0:20,0:20:50.96:0,51,439	0/0:21,0:21:50.96:0,51,443	0/0:20,0:20:38.97:0,39,338	0/0:18,0:18:41.98:0,42,364	0/0:14,0:14:35.98:0,36,312	0/0:16,0:17:44.01:0,44,367	0/0:26,0:26:43.88:0,44,546	0/0:17,0:17:50.99:0,51,443	0/0:16,0:16:35.95:0,36,309	0/0:13,1:14:8.81:0,9,305	0/0:8,0:8:20.99:0,21,182	0/0:32,0:32:86.96:0,87,755	0/0:20,0:20:56.98:0,57,495	0/0:28,0:28:26.76:0,27,454	0/0:9,0:9:17.99:0,18,156	0/0:34,0:34:89.95:0,90,781	0/0:15,0:15:32.98:0,33,286	0/0:4,0:4:8.98:0,9,74	0/0:31,0:31:86.90:0,87,743	0/0:9,0:9:20.99:0,21,182	1/1:8,18:25:34.08:593,34,0	0/0:21,0:22:56.02:0,56,475	0/0:5,0:5:15:0,15,130
chr10	98394612	.	T	TA	5332.18	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-8.620;DP=663;FS=5.444;HRun=0;HaplotypeScore=84.6311;InbreedingCoeff=0.9990;MQ=70.14;MQ0=2;MQRankSum=-1.932;QD=43.35;ReadPosRankSum=0.847;VQSLOD=5.1551;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:68.83:1098,69,0	0/0:7,0:7:21.07:0,21,293	0/0:40,0:35:94.33:0,94,1203	0/0:29,0:16:41.93:0,42,524	0/0:20,0:20:60.15:0,60,756	0/0:23,0:23:54.09:0,54,700	0/0:16,0:16:39.11:0,39,526	1/1:0,27:27:81.25:1247,81,0	0/0:22,0:22:51.14:0,51,687	0/0:25,0:25:69.69:0,70,932	0/0:22,0:22:60.17:0,60,791	0/0:27,0:27:45.15:0,45,629	0/0:21,0:21:53.52:0,54,702	0/0:24,0:24:69.21:0,69,943	0/0:26,0:26:66.20:0,66,890	1/1:3,16:19:45.12:690,45,0	0/0:35,0:35:93.20:0,93,1220	1/1:0,18:18:48.16:757,48,0	0/0:29,0:29:84.24:0,84,1133	0/0:18,0:18:45.14:0,45,614	0/0:36,0:36:99:0,102,1379	0/0:29,0:29:78.26:0,78,1088	0/0:15,0:14:32.57:0,33,383	0/0:31,0:31:66.14:0,66,865	0/0:18,0:18:42.13:0,42,571	1/1:1,23:24:72.01:1061,72,0	0/0:27,0:27:81.24:0,81,1098	1/1:0,10:10:30.10:479,30,0
chr10	98394628	.	C	CGTGT	2800.29	PASS	AB=0.947;AC=31;AF=0.596;AN=52;BaseQRankSum=-0.984;DP=715;FS=3.495;HRun=0;HaplotypeScore=135.3484;InbreedingCoeff=0.3560;MQ=57.19;MQ0=16;MQRankSum=0.074;QD=5.74;ReadPosRankSum=-2.777;VQSLOD=1.9963;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:24.02:338,24,0	0/0:10,0:10:6.02:0,6,92	./.	./.	0/0:16,0:16:9.03:0,9,140	0/1:13,13:27:0.91:200,0,1	1/1:14,11:29:6.49:142,6,0	1/1:21,0:19:2.96:19,3,0	0/1:21,0:21:12.46:197,0,12	0/0:19,0:20:7.35:0,7,114	0/0:23,0:24:17.82:0,18,203	1/1:15,10:27:8.55:96,9,0	1/1:8,9:18:8.76:153,9,0	1/1:31,0:29:36:495,36,0	1/1:10,9:22:11.78:224,12,0	0/0:10,0:17:15.02:0,15,139	0/0:35,0:39:12.85:0,13,610	1/1:18,0:18:14.93:169,15,0	0/0:21,0:20:8.53:0,9,119	0/1:15,0:15:5.97:6,0,113	0/1:39,0:40:3.67:4,0,175	1/1:20,12:33:5.91:87,6,0	1/1:11,1:14:9.10:99,9,0	1/1:18,24:44:29.84:635,30,0	0/1:20,0:19:26.80:27,0,201	0/1:29,0:29:46.37:46,0,103	0/1:30,0:32:16.46:16,0,128	1/1:5,0:6:2.99:23,3,0
chr10	98394656	.	T	TGTGT	2631.20	PASS	AB=0.971;AC=31;AF=0.596;AN=52;BaseQRankSum=-4.840;DP=708;FS=3.672;HRun=0;HaplotypeScore=109.9936;InbreedingCoeff=0.3393;MQ=51.24;MQ0=18;MQRankSum=-0.691;QD=5.53;ReadPosRankSum=-2.827;VQSLOD=1.6918;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:37:18.90:265,19,0	0/0:9,0:9:6.02:0,6,92	./.	./.	0/0:18,0:18:9.03:0,9,140	0/1:23,0:23:0.91:200,0,1	1/1:32,0:32:6.02:141,6,0	1/1:23,0:18:5.14:24,5,0	0/1:21,4:26:15.68:133,0,16	0/0:21,0:21:7.61:0,8,114	0/0:23,0:23:17.82:0,18,203	1/1:24,0:24:8.55:96,9,0	1/1:20,0:20:8.76:153,9,0	1/1:30,0:29:33.02:473,33,0	1/1:28,0:28:11.78:224,12,0	0/0:20,0:19:15.02:0,15,139	0/0:36,0:36:6.84:0,7,544	1/1:14,0:13:13.76:151,14,0	0/0:14,0:14:6.44:0,6,116	0/1:12,0:12:5.97:6,0,113	0/1:44,0:41:4.63:5,0,175	1/1:22,0:22:5.91:87,6,0	1/1:17,0:16:9.10:99,9,0	1/1:41,0:40:29.84:635,30,0	0/1:25,0:24:26.80:27,0,201	0/1:21,0:21:48.34:48,0,102	0/1:30,0:30:16.46:16,0,128	1/1:5,0:5:2.99:23,3,0
chr10	98396334	.	AATAGGTAG	A	795.81	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.218;DP=764;FS=3.779;HRun=0;HaplotypeScore=189.6323;InbreedingCoeff=0.9722;MQ=65.91;MQ0=1;MQRankSum=-6.263;QD=30.61;ReadPosRankSum=-0.843;VQSLOD=3.0816;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:60.16:0,60,2501	0/0:18,0:18:54.19:0,54,2129	0/0:27,0:26:57.19:0,57,1827	0/0:18,0:18:36.11:0,36,1029	0/0:33,0:33:93.32:0,93,3653	0/0:18,0:18:45.14:0,45,1613	0/0:20,0:20:45.15:0,45,1602	0/0:44,0:44:90.28:0,90,3100	0/0:25,0:25:69.24:0,69,2743	0/0:55,0:55:99:0,159,5969	0/0:24,0:24:63.22:0,63,2632	0/0:24,0:24:72.25:0,72,2955	0/0:39,0:39:99:0,105,4306	0/0:23,0:23:60.19:0,60,2108	0/0:29,0:29:78.27:0,78,3198	1/1:7,19:26:36.12:891,36,0	0/0:21,0:21:12.65:0,13,2191	0/0:17,0:17:39.11:0,39,1334	0/0:15,0:15:39.13:0,39,1297	0/0:30,0:30:72.23:0,72,2556	0/0:21,0:21:63.22:0,63,2344	0/0:33,0:33:90.31:0,90,3570	0/0:32,0:32:75.24:0,75,2717	0/0:27,0:27:30.72:0,31,2489	0/0:27,0:27:75.24:0,75,2821	0/0:41,0:41:99:0,114,4171	0/0:41,0:40:99:0,117,4147	0/0:9,0:9:27.09:0,27,1071
chr10	98396483	.	GTAGA	G	4863.44	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.049;DP=743;FS=1.258;HRun=0;HaplotypeScore=131.2342;InbreedingCoeff=0.9989;MQ=63.10;MQ0=0;MQRankSum=-4.910;QD=36.84;ReadPosRankSum=-1.025;VQSLOD=4.7114;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:27:37.64:747,38,0	0/0:8,0:8:24.08:0,24,623	0/0:37,0:35:94.44:0,94,2094	0/0:20,0:19:31.31:0,31,881	0/0:32,0:32:90.30:0,90,2281	0/0:30,0:30:87.24:0,87,2056	0/0:22,0:22:54.13:0,54,1188	1/1:5,29:34:84.05:1254,84,0	0/0:28,0:28:78.25:0,78,1944	0/0:34,0:34:99:0,102,2561	0/0:28,0:28:78.27:0,78,2010	0/0:14,0:14:39.12:0,39,957	0/0:32,0:32:90.31:0,90,2313	0/0:27,0:27:69.22:0,69,1732	0/0:33,0:33:90.31:0,90,2313	0/0:28,0:28:72.23:0,72,1752	0/0:22,0:22:54.13:0,54,1338	1/1:3,22:25:45.08:773,45,0	0/0:9,0:9:24.08:0,24,569	0/0:31,0:31:84.25:0,84,2015	0/0:22,0:22:63.22:0,63,1607	0/0:30,0:30:87.26:0,87,2141	0/0:32,0:32:87.29:0,87,2203	0/0:33,0:33:75.26:0,75,1896	0/0:28,0:28:72.25:0,72,1868	1/1:3,28:31:84.16:1366,84,0	0/0:30,0:30:75.23:0,75,1808	1/1:0,15:15:45.02:724,45,0
chr10	98396722	.	T	TG	553.79	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.880;DP=707;FS=2.042;HRun=0;HaplotypeScore=70.7884;InbreedingCoeff=0.9410;MQ=90.53;MQ0=0;MQRankSum=-3.558;QD=25.17;ReadPosRankSum=0.464;VQSLOD=4.0438;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.24:0,72,1006	0/0:11,0:11:33.09:0,33,443	0/0:31,0:31:84.23:0,84,1110	0/0:28,0:28:66.57:0,67,865	0/0:24,0:24:72.24:0,72,1005	0/0:27,0:27:81.25:0,81,1114	0/0:19,0:19:57.19:0,57,796	0/0:37,0:37:99:0,108,1462	0/0:28,0:28:84.26:0,84,1154	0/0:22,0:22:66.18:0,66,901	0/0:19,0:19:57.19:0,57,795	0/0:20,0:20:57.19:0,57,796	0/0:23,0:23:66.22:0,66,921	0/0:26,0:26:75.24:0,75,1032	0/0:35,0:35:99:0,105,1447	1/1:1,20:22:9.20:637,9,0	0/0:28,0:28:75.25:0,75,1047	0/0:13,0:13:36.09:0,36,482	0/0:22,0:22:66.22:0,66,923	0/0:30,0:30:87.28:0,87,1198	0/0:26,0:26:75.24:0,75,1031	0/0:38,0:38:99:0,114,1548	0/0:24,0:24:67.17:0,67,961	0/0:27,0:27:81.23:0,81,1111	0/0:27,0:27:78.26:0,78,1089	0/0:36,0:36:99:0,108,1461	0/0:22,0:21:63.21:0,63,866	0/0:18,0:18:51.13:0,51,675
chr10	98397913	.	G	GAAA	2323.12	PASS	AB=0.832;AC=11;AF=0.196;AN=56;BaseQRankSum=3.864;DP=267;FS=7.899;HRun=2;HaplotypeScore=93.7404;InbreedingCoeff=0.3331;MQ=57.66;MQ0=4;MQRankSum=-2.057;QD=18.44;ReadPosRankSum=1.513;VQSLOD=0.4386;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:7,11:18:24.84:461,0,25	0/0:1,0:1:2.92:0,3,17	0/1:22,0:8:1.22:1,0,146	0/1:21,0:11:25.01:25,0,112	0/0:7,0:7:12.03:0,12,159	0/0:6,0:6:17.99:0,18,186	0/0:4,0:4:8.89:0,9,90	0/1:11,1:12:70.85:233,0,71	0/0:7,0:7:15.93:0,16,210	0/0:10,0:10:27.01:0,27,376	0/0:7,0:7:8.91:0,9,79	0/0:3,0:2:3:0,3,26	0/0:7,0:7:21.02:0,21,252	0/0:4,0:4:9.03:0,9,123	0/0:3,0:3:9.02:0,9,100	1/1:6,1:7:8.03:161,8,0	0/0:7,0:7:15.78:0,16,171	0/1:3,3:6:31.89:32,0,82	0/0:9,0:9:24.52:0,25,289	0/0:5,0:5:11.36:0,11,135	0/0:13,0:13:20.25:0,20,232	0/0:13,0:13:20.31:0,20,272	0/0:15,0:15:22.56:0,23,263	0/0:10,0:9:12.04:0,12,164	0/0:5,0:5:7.53:0,8,59	1/1:11,15:27:77.48:1183,77,0	0/0:5,0:5:11.95:0,12,117	1/1:8,3:11:28.22:382,28,0
chr10	98397938	.	AAGG	A	850.62	PASS	AB=0.931;AC=8;AF=0.143;AN=56;BaseQRankSum=9.797;DP=401;FS=41.892;HRun=0;HaplotypeScore=111.5342;InbreedingCoeff=-0.1727;MQ=55.91;MQ0=3;MQRankSum=-7.494;QD=6.25;ReadPosRankSum=3.205;VQSLOD=0.6983;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:60.47:60,0,871	0/1:1,1:2:30.77:31,0,63	0/0:36,0:15:21.12:0,21,562	0/0:46,0:20:38.71:0,39,670	0/0:9,0:9:27.09:0,27,607	0/0:9,0:9:27.09:0,27,598	0/0:8,0:8:24.08:0,24,524	0/1:21,0:22:99:215,0,802	0/0:8,0:9:12.39:0,12,472	0/1:12,2:13:60.65:61,0,710	0/0:10,0:10:21.07:0,21,480	0/0:4,1:4:9.03:0,9,207	0/0:9,0:9:25.64:0,26,557	0/0:6,0:6:18.06:0,18,414	0/0:5,0:5:15.05:0,15,345	0/1:12,0:12:31.05:31,0,187	0/0:8,0:8:24.08:0,24,552	0/0:9,0:9:21.07:0,21,463	0/1:13,1:14:12.91:13,0,709	0/0:7,1:8:13.83:0,14,392	0/0:19,0:19:51.18:0,51,1149	0/0:21,0:22:46.49:0,46,1032	0/0:18,0:18:42.10:0,42,871	0/0:11,1:12:26.26:0,26,585	0/0:7,1:8:24.08:0,24,531	0/1:33,1:34:99:340,0,1209	0/0:9,0:9:27.09:0,27,619	0/1:14,0:14:99:235,0,375
chr10	98397940	.	GGA	G	303.47	PASS	AB=0.817;AC=4;AF=0.071;AN=56;BaseQRankSum=7.868;DP=413;FS=18.727;HRun=0;HaplotypeScore=109.2006;InbreedingCoeff=-0.0824;MQ=55.78;MQ0=4;MQRankSum=-5.990;QD=3.23;ReadPosRankSum=1.962;VQSLOD=1.1950;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,2:24:7.48:7,0,724	0/0:3,0:3:6.49:0,6,98	0/0:36,0:15:17.86:0,18,522	0/0:47,1:21:31.71:0,32,563	0/0:9,0:9:27.09:0,27,491	0/0:10,0:10:30.10:0,30,537	0/0:9,0:9:27.09:0,27,486	0/1:17,5:22:91.24:91,0,656	0/0:9,0:9:22.89:0,23,389	0/0:14,0:13:15.35:0,15,580	0/0:11,0:11:24.08:0,24,428	0/0:5,0:4:9.03:0,9,165	0/0:9,0:9:26.96:0,27,454	0/0:6,0:6:18.06:0,18,329	0/0:6,0:6:18.06:0,18,323	0/0:12,0:12:32.64:0,33,302	0/0:8,0:8:24.08:0,24,439	0/0:9,0:9:21.07:0,21,385	0/0:15,0:14:24.78:0,25,592	0/0:9,0:9:23.82:0,24,386	0/0:20,0:20:54.19:0,54,980	0/0:22,0:22:50.40:0,50,848	0/0:18,0:18:42.14:0,42,753	0/0:12,0:12:27.09:0,27,475	0/0:10,0:10:24.08:0,24,428	0/1:27,7:34:99:167,0,1020	0/0:9,0:9:27.09:0,27,494	0/1:8,6:14:99:143,0,295
chr10	98397974	.	A	AGGAGG	553.66	PASS	AB=0.956;AC=6;AF=0.107;AN=56;BaseQRankSum=7.575;DP=496;FS=26.782;HRun=0;HaplotypeScore=119.0070;InbreedingCoeff=-0.1179;MQ=55.41;MQ0=13;MQRankSum=-5.311;QD=4.39;ReadPosRankSum=-0.540;VQSLOD=0.7077;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,1:35:8.17:8,0,1697	0/1:8,0:8:11.30:11,0,376	0/0:41,0:20:32.93:0,33,654	0/0:61,0:24:42.16:0,42,884	0/0:13,0:13:39.12:0,39,856	0/0:10,0:10:30.10:0,30,639	0/0:13,0:13:36.12:0,36,833	0/1:21,0:20:5.98:6,0,849	0/0:10,0:11:3.95:0,4,537	0/0:14,0:14:21.72:0,22,762	0/0:11,0:11:30.10:0,30,669	0/0:8,0:8:24.08:0,24,544	0/0:11,0:11:33.11:0,33,752	0/0:12,0:12:36.12:0,36,779	0/0:8,0:8:24.08:0,24,501	0/1:17,0:16:65.10:65,0,746	0/0:13,0:13:39.13:0,39,839	0/0:10,0:10:27.09:0,27,590	0/0:12,0:12:33.11:0,33,765	0/0:18,0:18:32.65:0,33,1026	0/0:30,0:30:84.18:0,84,1629	0/0:18,0:18:54.16:0,54,1164	0/0:17,0:17:45.15:0,45,1018	0/0:13,0:13:33.07:0,33,706	0/0:15,0:15:39.08:0,39,875	0/1:32,0:32:99:212,0,1621	0/0:10,0:10:30.10:0,30,698	0/1:9,4:13:99:368,0,423
chr10	98398442	.	T	TA	1516.44	PASS	AB=0.639;AC=5;AF=0.089;AN=56;BaseQRankSum=-3.930;DP=625;FS=0.000;HRun=9;HaplotypeScore=63.7420;InbreedingCoeff=0.7311;MQ=84.22;MQ0=0;MQRankSum=-1.585;QD=19.69;ReadPosRankSum=-4.053;VQSLOD=2.3344;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,107,919	0/0:11,0:11:23.86:0,24,197	0/0:26,0:27:64.63:0,65,532	0/0:15,0:14:11.10:0,11,123	0/0:32,0:32:71.91:0,72,616	0/0:20,0:20:47.96:0,48,413	0/0:23,0:23:59.95:0,60,513	1/1:5,27:32:81.20:887,81,0	0/0:18,0:18:50.98:0,51,440	0/0:23,0:23:56.97:0,57,495	0/0:23,0:23:62.90:0,63,535	0/0:26,0:27:71.02:0,71,605	0/0:14,0:14:32.97:0,33,286	0/0:11,0:11:32.98:0,33,283	0/0:17,0:17:44.97:0,45,387	0/0:19,0:19:56.97:0,57,491	0/0:24,0:24:68.96:0,69,594	0/0:15,0:15:38.99:0,39,339	0/0:19,1:19:5.77:0,6,274	0/0:28,0:28:59.96:0,60,521	0/0:19,0:20:56.02:0,56,475	0/0:24,0:24:62.97:0,63,547	0/0:20,0:20:56.97:0,57,492	0/0:26,0:26:74.98:0,75,651	0/0:25,0:25:71.95:0,72,619	0/1:10,1:23:55.09:154,0,55	0/0:25,0:25:71.96:0,72,618	1/1:1,21:22:34.11:604,34,0
chr10	98398634	.	AG	A	230.07	PASS	AB=0.873;AC=3;AF=0.056;AN=54;BaseQRankSum=3.424;DP=533;FS=4.184;HRun=2;HaplotypeScore=77.7977;InbreedingCoeff=-0.0797;MQ=60.53;MQ0=7;MQRankSum=-2.065;QD=3.77;ReadPosRankSum=-2.473;VQSLOD=-0.4216;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:0.74:0,1,455	0/1:15,0:15:27.27:27,0,330	0/0:16,0:11:27.02:0,27,330	0/0:14,0:7:17.55:0,18,232	0/1:20,11:31:99:287,0,603	0/0:20,0:20:30.54:0,31,314	0/0:26,0:26:78.19:0,78,1090	0/0:27,0:24:66.15:0,66,932	0/0:21,0:21:40.07:0,40,451	0/0:25,0:25:72.22:0,72,1022	0/0:17,0:17:48.08:0,48,668	0/0:15,0:15:33.64:0,34,324	0/0:11,0:11:14.22:0,14,154	0/0:14,0:14:31.80:0,32,360	0/0:22,0:22:37.06:0,37,406	0/0:12,6:17:17.78:0,18,451	0/0:32,0:31:90.29:0,90,1321	0/0:12,0:12:12.93:0,13,356	0/0:11,0:11:30.09:0,30,429	0/0:19,0:19:57.15:0,57,788	0/0:13,0:12:0.71:0,1,245	0/0:17,0:17:44.20:0,44,414	0/0:19,0:19:40.03:0,40,470	0/1:13,2:15:12.34:12,0,164	0/0:28,0:28:51.58:0,52,547	0/0:18,0:18:51.11:0,51,693	0/0:35,0:35:99:0,105,1465	./.
chr10	98398635	.	GGAAA	G	1930.45	PASS	AB=1.000;AC=23;AF=0.479;AN=48;BaseQRankSum=3.501;DP=534;FS=8.416;HRun=0;HaplotypeScore=100.3862;InbreedingCoeff=0.8050;MQ=59.49;MQ0=7;MQRankSum=1.090;QD=9.02;ReadPosRankSum=2.547;VQSLOD=2.0258;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:6.50:56,7,0	0/0:15,0:15:24.38:0,24,382	./.	./.	0/0:29,0:31:44.22:0,44,326	1/1:6,0:20:15.02:140,15,0	0/0:27,0:27:30.93:0,31,453	./.	1/1:9,11:20:15.05:229,15,0	0/0:25,0:25:42.11:0,42,806	0/1:19,0:19:5.47:5,0,473	1/1:6,9:15:18.06:275,18,0	1/1:3,7:10:6.02:92,6,0	1/1:8,6:14:12.04:175,12,0	1/1:8,14:22:15.05:229,15,0	0/0:20,0:19:10.24:0,10,102	0/0:32,0:31:60.14:0,60,1220	1/1:12,0:12:0.89:20,1,0	0/0:10,0:10:9.03:0,9,193	0/0:19,0:19:33.11:0,33,711	0/0:11,0:11:17.93:0,18,268	1/1:3,14:17:27.09:375,27,0	0/0:9,0:20:11.04:0,11,119	1/1:11,2:15:18.04:249,18,0	1/1:14,14:28:18.06:275,18,0	0/0:18,0:18:5.93:0,6,102	0/0:35,1:36:15.56:0,16,1187	./.
chr10	98398686	.	A	AAG	375.72	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=9.278;DP=572;FS=2.853;HRun=0;HaplotypeScore=110.5893;InbreedingCoeff=0.2032;MQ=54.73;MQ0=11;MQRankSum=-5.316;QD=2.35;ReadPosRankSum=-1.141;VQSLOD=2.3606;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:23:28.83:29,0,79	0/1:16,0:16:12.87:13,0,266	0/0:12,0:8:21.07:0,21,272	0/0:11,0:5:8.87:0,9,117	0/1:34,0:34:17.12:17,0,838	0/0:25,0:25:48.06:0,48,538	0/0:27,0:27:73.99:0,74,972	1/1:24,0:16:7.66:46,8,0	0/0:21,0:21:28.14:0,28,458	0/0:29,0:28:75.21:0,75,937	0/0:25,0:25:57.18:0,57,731	0/0:15,0:15:36.04:0,36,383	0/0:11,0:11:18.03:0,18,205	0/0:16,0:16:36.54:0,37,424	0/0:25,0:25:48.09:0,48,552	1/1:14,4:18:32.56:264,33,0	0/0:34,0:33:75.12:0,75,1096	0/1:9,0:9:19.53:20,0,48	0/0:12,0:12:30.06:0,30,390	0/0:29,0:29:87.26:0,87,1093	0/1:15,0:14:16.27:16,0,313	0/0:23,0:23:48.54:0,49,525	0/0:23,0:23:24.36:0,24,522	0/0:21,0:21:31.01:0,31,498	0/0:22,0:22:42.01:0,42,419	0/1:13,0:12:33.85:115,0,34	0/0:31,0:31:90.25:0,90,1120	0/1:6,0:6:8.91:10,0,9
chr10	98398688	.	GA	G	97.36	PASS	AB=0.731;AC=1;AF=0.018;AN=56;BaseQRankSum=5.241;DP=578;FS=16.079;HRun=3;HaplotypeScore=104.6491;InbreedingCoeff=-0.0211;MQ=55.67;MQ0=10;MQRankSum=-4.498;QD=5.12;ReadPosRankSum=1.375;VQSLOD=-0.4569;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,2:23:7.75:0,8,263	0/0:16,0:16:48.14:0,48,658	0/0:15,0:9:24.08:0,24,369	0/0:12,0:6:12.51:0,13,181	0/0:31,0:34:82.56:0,83,1234	0/0:25,0:25:45.59:0,46,558	0/0:28,0:28:80.65:0,81,1260	0/0:22,0:16:39.13:0,39,573	0/0:21,0:21:34.71:0,35,461	0/0:29,0:28:78.27:0,78,1227	0/0:24,0:24:65.95:0,66,969	0/0:15,0:15:33.64:0,34,339	0/0:11,0:11:17.23:0,17,206	0/0:16,0:16:37.82:0,38,467	0/0:26,0:26:49.10:0,49,606	0/1:9,7:18:28.28:172,0,28	0/0:34,0:33:90.25:0,90,1412	0/0:7,1:8:21:0,21,260	0/0:12,0:12:36.10:0,36,527	0/0:29,0:29:87.30:0,87,1363	0/0:15,0:14:42.12:0,42,585	0/0:23,0:23:52.03:0,52,545	0/0:23,0:23:48.62:0,49,716	0/0:21,1:22:43.59:0,44,628	0/0:23,0:23:42.63:0,43,442	0/0:13,0:12:35.91:0,36,430	0/0:33,0:33:98.88:0,99,1482	0/0:6,0:6:12.48:0,12,144
chr10	98398691	.	AG	A	118.10	PASS	AB=0.731;AC=1;AF=0.018;AN=56;BaseQRankSum=5.645;DP=583;FS=19.787;HRun=1;HaplotypeScore=103.1908;InbreedingCoeff=0.0286;MQ=55.51;MQ0=10;MQRankSum=-4.297;QD=6.22;ReadPosRankSum=0.070;VQSLOD=-0.6842;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,2:24:13.44:0,13,214	0/0:16,0:16:48.16:0,48,753	0/0:15,0:9:24.08:0,24,383	0/0:12,0:6:12.51:0,13,192	0/0:32,0:32:50.03:0,50,1164	0/0:25,0:25:48.08:0,48,647	0/0:28,0:28:68.67:0,69,1240	0/0:25,0:19:44.95:0,45,592	0/0:21,0:21:43.36:0,43,572	0/0:28,0:27:78.27:0,78,1247	0/0:24,0:24:66.19:0,66,988	0/0:15,0:15:36.08:0,36,452	0/0:11,0:11:18.05:0,18,247	0/0:16,0:16:39.03:0,39,532	0/0:29,0:29:60.15:0,60,810	0/1:12,7:18:15.03:193,0,15	0/0:34,0:33:90.28:0,90,1429	0/0:7,1:8:20.86:0,21,174	0/0:12,0:12:36.08:0,36,532	0/0:29,0:29:87.30:0,87,1390	0/0:15,0:14:42.14:0,42,658	0/0:24,0:24:38.13:0,38,673	0/0:23,0:23:51.17:0,51,802	0/0:21,1:22:21.21:0,21,673	0/0:23,0:23:45.11:0,45,587	0/0:13,0:12:35.95:0,36,436	0/0:33,0:33:99:0,99,1532	0/0:6,0:6:12.01:0,12,144
chr10	98398706	.	G	GGAAGGAAGAAAAGAAA	4170.89	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=8.659;DP=610;FS=0.530;HRun=0;HaplotypeScore=256.6786;InbreedingCoeff=0.5988;MQ=58.23;MQ0=8;MQRankSum=-10.296;QD=35.65;ReadPosRankSum=-2.852;VQSLOD=2.3481;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,12:36:21.09:284,21,0	0/0:15,0:15:39.56:0,40,1282	0/0:24,0:16:42.28:0,42,853	0/0:16,0:10:24:0,24,438	0/0:31,0:31:72.76:0,73,2725	0/0:26,0:26:54.14:0,54,1894	0/0:30,0:30:70.53:0,71,1733	0/1:28,0:25:99:715,0,274	0/0:20,0:20:44.17:0,44,1501	0/0:26,0:26:69.20:0,69,2140	0/0:27,0:27:72.25:0,72,2580	0/0:13,0:13:33.10:0,33,1091	0/0:10,0:10:18.06:0,18,733	0/0:17,0:17:42.12:0,42,1533	0/0:27,0:27:63.17:0,63,2405	1/1:22,0:21:36.59:1407,37,0	0/0:30,0:30:78.02:0,78,2611	1/1:11,0:11:23.87:678,24,0	0/0:13,0:12:33.10:0,33,1109	0/0:30,0:30:81.28:0,81,3176	0/0:15,0:14:39.13:0,39,1437	0/0:22,0:22:48.15:0,48,1790	0/0:21,0:21:50.25:0,50,1970	0/0:25,0:25:45:0,45,2082	0/0:24,0:24:39.12:0,39,1484	0/1:15,0:14:99:826,0,140	0/0:30,0:30:87.19:0,87,2828	0/1:5,0:5:64.74:261,0,65
chr10	98398709	.	A	AGAAAAGAAAGAT	4573.05	PASS	AB=0.782;AC=10;AF=0.179;AN=56;BaseQRankSum=3.162;DP=606;FS=1.237;HRun=0;HaplotypeScore=212.5928;InbreedingCoeff=0.7030;MQ=59.34;MQ0=5;MQRankSum=-9.279;QD=38.11;ReadPosRankSum=-3.144;VQSLOD=4.1963;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:34:22.75:119,0,23	0/0:15,0:15:27.08:0,27,840	0/0:24,0:16:8.70:0,9,203	0/0:18,0:12:18.16:0,18,303	0/0:29,0:29:60.20:0,60,1906	0/0:26,0:26:45.15:0,45,1511	0/0:27,0:27:48.15:0,48,1198	1/1:27,0:27:45.14:1323,45,0	0/0:21,0:21:36.12:0,36,1122	0/0:25,0:25:39.12:0,39,1222	0/0:24,0:24:54.19:0,54,1654	0/0:13,0:13:24.08:0,24,763	0/0:9,0:9:15.05:0,15,527	0/0:16,0:16:39.09:0,39,1226	0/0:27,0:27:51.17:0,51,1733	1/1:22,0:21:29.86:1138,30,0	0/0:32,0:32:41.55:0,42,1543	1/1:10,0:10:12.32:495,12,0	0/0:13,0:12:27.09:0,27,798	0/0:28,0:28:69.22:0,69,2216	0/0:16,0:15:39.11:0,39,1046	0/0:18,0:18:42.13:0,42,1263	0/0:22,0:22:42.14:0,42,1409	0/0:26,0:26:51.60:0,52,1397	0/0:24,0:24:39.12:0,39,1160	0/1:5,9:15:51.71:1145,0,52	0/0:32,0:32:66.16:0,66,1815	1/1:2,3:11:6.02:353,6,0
chr10	98398728	.	A	AAAGATGAAAAG	4058.80	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=6.659;DP=576;FS=4.384;HRun=0;HaplotypeScore=190.4507;InbreedingCoeff=0.1831;MQ=68.89;MQ0=2;MQRankSum=-9.605;QD=33.82;ReadPosRankSum=-0.732;VQSLOD=3.0688;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:47.30:47,0,142	0/0:10,0:10:30.09:0,30,918	0/0:24,0:19:41.63:0,42,606	0/0:19,0:18:36.24:0,36,716	0/0:27,0:27:78.25:0,78,2266	0/0:22,0:22:54.18:0,54,1717	0/0:20,0:20:60.19:0,60,1544	0/1:28,0:28:99:1001,0,274	0/0:24,0:24:54.18:0,54,1458	0/0:19,0:19:54.18:0,54,1523	0/0:25,0:25:72.23:0,72,1992	0/0:14,0:14:36.12:0,36,988	0/0:11,0:11:27.09:0,27,686	0/0:15,0:15:45.15:0,45,1400	0/0:23,0:23:57.18:0,57,1859	1/1:7,8:18:28.50:1333,29,0	0/0:27,0:27:34.16:0,34,1842	0/1:12,0:12:99:334,0,237	0/0:20,0:19:60.20:0,60,1270	0/0:30,0:30:84.10:0,84,2460	0/0:18,0:18:54.15:0,54,1332	0/0:16,0:16:48.16:0,48,1436	0/0:23,0:23:63.20:0,63,1688	0/0:22,0:22:57.17:0,57,1602	0/0:24,0:24:51.17:0,51,1441	0/1:17,0:17:99:1077,0,175	0/0:23,0:23:69.21:0,69,2041	0/1:13,0:13:98.17:266,0,98
chr10	98398730	.	A	AGATG	1184.81	PASS	AB=0.917;AC=7;AF=0.125;AN=56;BaseQRankSum=4.351;DP=559;FS=1.686;HRun=0;HaplotypeScore=106.7848;InbreedingCoeff=0.1825;MQ=71.23;MQ0=0;MQRankSum=-8.159;QD=11.62;ReadPosRankSum=-0.080;VQSLOD=3.1034;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,1:27:40.90:41,0,331	0/0:10,0:10:30.09:0,30,591	0/0:22,0:19:44.83:0,45,835	0/0:21,0:20:50.87:0,51,876	0/0:26,0:26:78.27:0,78,1593	0/0:23,0:23:60.16:0,60,1178	0/0:22,0:22:60.20:0,60,1191	0/1:19,6:25:99:553,0,938	0/0:23,0:23:60.21:0,60,1232	0/0:19,0:19:54.19:0,54,1119	0/0:25,0:25:72.25:0,72,1472	0/0:13,0:13:39.13:0,39,795	0/0:11,0:11:30.10:0,30,615	0/0:16,0:16:48.16:0,48,971	0/0:23,0:23:60.21:0,60,1236	1/1:15,0:15:24.07:363,24,0	0/0:25,0:26:75.26:0,75,1510	0/1:9,2:11:99:134,0,457	0/0:21,0:20:60.21:0,60,1234	0/0:31,0:31:93.29:0,93,1793	0/0:19,0:19:54.17:0,54,1073	0/0:16,0:16:48.16:0,48,983	0/0:21,0:21:63.22:0,63,1310	0/0:22,0:22:57.40:0,57,1056	0/0:22,0:22:54.19:0,54,1105	0/1:13,0:13:99:137,0,351	0/0:25,0:25:75.21:0,75,1422	0/1:11,0:11:93.01:93,0,174
chr10	98398960	.	AAAAAAAAAAAAAAGAAAG	A	4830.47	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=10.146;DP=599;FS=2.192;HRun=0;HaplotypeScore=259.9431;InbreedingCoeff=0.6647;MQ=64.32;MQ0=13;MQRankSum=-2.413;QD=35.26;ReadPosRankSum=4.517;VQSLOD=3.1058;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:42.10:0,42,772	0/0:4,0:4:12.04:0,12,948	0/1:40,0:10:29.17:29,0,224	0/0:19,0:12:20.13:0,20,386	0/0:32,0:32:69.65:0,70,3539	0/0:27,0:26:78.26:0,78,3558	0/0:12,0:12:30.10:0,30,1849	1/1:2,33:35:95.74:1381,96,0	0/0:15,0:15:36.07:0,36,1273	0/0:33,0:30:84.28:0,84,4442	0/0:25,0:24:63.15:0,63,2405	0/0:16,0:16:42.12:0,42,1792	0/0:15,0:14:42.13:0,42,1762	0/0:12,0:12:24.08:0,24,899	0/0:22,0:21:45.15:0,45,2448	0/1:25,0:25:99:105,0,229	0/0:32,0:32:75.88:0,76,3580	0/0:17,0:17:25.87:0,26,578	0/0:13,0:11:30.09:0,30,998	0/0:22,0:22:63.22:0,63,3110	0/0:15,0:15:5.61:0,6,1958	0/0:13,0:13:36.12:0,36,1626	0/0:10,0:10:27.04:0,27,1324	0/0:15,0:14:30.93:0,31,1850	0/0:24,0:23:60.20:0,60,3519	1/1:1,25:26:12.22:2220,12,0	0/0:30,0:29:81.21:0,81,4631	1/1:0,11:11:24.08:1095,24,0
chr10	98398965	.	AAAAAAAAAG	A	2708.04	PASS	AB=0.786;AC=12;AF=0.214;AN=56;BaseQRankSum=11.767;DP=608;FS=4.473;HRun=0;HaplotypeScore=178.2571;InbreedingCoeff=0.5833;MQ=64.28;MQ0=13;MQRankSum=-4.829;QD=12.83;ReadPosRankSum=6.774;VQSLOD=2.1292;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,27:36:47.45:486,0,47	0/0:5,0:5:15.05:0,15,492	0/1:41,0:11:7.05:7,0,117	0/1:21,0:12:4.46:4,0,163	0/0:28,0:28:63.39:0,63,1616	0/0:28,0:27:80.28:0,80,1606	0/0:14,0:14:35.83:0,36,828	1/1:33,0:33:47.96:374,48,0	0/0:16,0:16:35.55:0,36,552	0/0:36,0:33:88.82:0,89,2132	0/0:24,0:23:57.27:0,57,1007	0/0:14,0:14:33.87:0,34,835	0/0:15,0:14:39.02:0,39,728	0/0:14,0:14:27.02:0,27,472	0/0:23,0:22:44.89:0,45,1114	1/1:8,0:26:15.74:484,16,0	0/0:35,0:35:76.27:0,76,1659	0/1:4,12:16:99:280,0,107	0/0:13,0:11:29.47:0,29,465	0/0:22,0:22:65.67:0,66,1495	0/0:14,0:14:21.68:0,22,884	0/0:13,0:13:35.79:0,36,714	0/0:11,0:11:26.06:0,26,651	0/0:16,0:15:30.57:0,31,942	0/0:25,0:24:66.16:0,66,1691	1/1:27,0:27:7.64:793,8,0	0/0:31,0:30:80.49:0,80,2140	1/1:11,0:11:24.08:447,24,0
chr10	98399236	.	AGCTG	A	2347.18	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.216;DP=665;FS=0.565;HRun=0;HaplotypeScore=118.8603;InbreedingCoeff=0.9968;MQ=76.11;MQ0=0;MQRankSum=-10.659;QD=42.68;ReadPosRankSum=1.059;VQSLOD=4.2140;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,42:45:99:2069,114,0	0/0:10,0:10:30.10:0,30,775	0/0:16,0:16:39.13:0,39,1017	0/0:14,0:14:36.12:0,36,835	0/0:27,0:27:78.27:0,78,2073	0/0:21,0:21:63.22:0,63,1656	0/0:38,0:38:99:0,114,3020	0/0:32,0:32:93.31:0,93,2362	0/0:37,0:37:99:0,111,2969	0/0:28,0:28:84.29:0,84,2217	0/0:13,0:13:39.13:0,39,1053	0/0:24,0:24:69.05:0,69,1862	0/0:14,0:14:39.12:0,39,962	0/0:42,0:42:99:0,123,3283	0/0:20,0:20:60.21:0,60,1620	0/0:31,0:31:84.29:0,84,2268	0/0:25,0:25:75.26:0,75,1926	1/1:0,10:10:21.07:399,21,0	0/0:17,0:17:48.16:0,48,1122	0/0:14,0:14:42.14:0,42,1133	0/0:43,0:43:99:0,120,3149	0/0:14,0:14:39.13:0,39,1049	0/0:12,0:12:33.11:0,33,889	0/0:25,0:25:75.24:0,75,1911	0/0:26,0:26:66.21:0,66,1649	0/0:30,0:30:90.31:0,90,2392	0/0:28,0:28:81.28:0,81,2172	0/0:9,0:9:27.09:0,27,728
chr10	98399760	.	GCA	G	292.21	PASS	AB=0.949;AC=19;AF=0.339;AN=56;BaseQRankSum=5.846;DP=460;FS=3.426;HRun=0;HaplotypeScore=110.6624;InbreedingCoeff=0.1948;MQ=50.15;MQ0=42;MQRankSum=-3.919;QD=1.38;ReadPosRankSum=-4.333;VQSLOD=0.6186;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,2:13:7.32:65,7,0	0/0:10,0:10:25.95:0,26,408	0/0:32,0:5:7.08:0,7,82	0/1:50,0:13:25.89:26,0,169	0/0:17,1:19:17.32:0,17,195	0/1:9,0:9:8.94:19,0,9	0/0:23,0:20:21.06:0,21,330	1/1:14,1:11:4.85:45,5,0	0/1:17,1:17:12.97:13,0,34	0/0:23,0:22:49.05:0,49,707	0/0:10,1:11:18.06:0,18,280	0/1:15,0:15:9.04:9,0,50	0/1:15,0:14:50.72:58,0,51	0/1:10,0:10:12.21:12,0,121	0/0:9,0:9:2.74:0,3,19	1/1:8,2:14:13.05:96,13,0	0/0:20,1:19:19.74:0,20,501	1/1:6,1:6:6.88:30,7,0	0/0:13,0:11:5.42:0,5,382	0/0:20,0:20:30.97:0,31,686	0/0:27,1:23:42.12:0,42,753	0/0:13,0:12:2.93:0,3,49	0/1:4,1:5:0:0,0,0	0/0:17,0:12:5.84:0,6,109	0/0:9,0:9:18.03:0,18,227	0/1:13,0:12:59.88:66,0,60	0/1:17,1:19:6.30:6,0,394	1/1:1,0:1:2.60:10,3,0
chr10	98399767	.	TGAGAGACAGTGAGAGA	T	528.92	PASS	AB=0.994;AC=17;AF=0.304;AN=56;BaseQRankSum=7.200;DP=467;FS=0.000;HRun=0;HaplotypeScore=165.8341;InbreedingCoeff=0.4913;MQ=52.00;MQ0=44;MQRankSum=-5.054;QD=3.43;ReadPosRankSum=-3.266;VQSLOD=1.4582;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:4.06:18,4,0	0/0:11,0:10:27.09:0,27,937	0/0:35,0:6:13.66:0,14,147	0/1:53,0:14:2.59:3,0,173	0/0:20,0:20:6.79:0,7,173	0/0:9,0:9:15.05:0,15,654	0/0:22,0:19:15.01:0,15,255	1/1:17,0:13:33.41:279,33,0	0/0:17,0:16:10.41:0,10,519	0/0:25,0:24:58.97:0,59,2210	0/0:11,0:11:16.61:0,17,396	0/0:15,0:15:9.89:0,10,354	0/0:14,0:13:9.96:0,10,764	0/0:11,0:11:9.13:0,9,516	1/1:7,0:7:0.39:0,0,0	1/1:5,8:15:8.93:128,9,0	0/1:22,0:20:11.83:12,0,881	1/1:7,0:6:11.04:99,11,0	0/0:13,0:10:27.08:0,27,1067	0/0:21,0:21:49.09:0,49,1110	0/0:25,0:20:33.08:0,33,462	0/0:13,0:12:2.07:0,2,48	1/1:6,0:6:0.90:2,1,0	0/0:18,0:13:6.02:0,6,443	0/0:11,0:11:1.24:0,1,441	0/1:12,0:11:61.87:117,0,62	0/0:21,0:21:34.99:0,35,1514	1/1:1,0:1:3:26,3,0
chr10	98399772	.	GAC	G	895.34	PASS	AB=0.911;AC=17;AF=0.304;AN=56;BaseQRankSum=4.704;DP=478;FS=11.270;HRun=0;HaplotypeScore=111.4890;InbreedingCoeff=0.3657;MQ=51.27;MQ0=45;MQRankSum=-6.458;QD=5.30;ReadPosRankSum=-3.031;VQSLOD=1.0515;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,8:11:4.32:33,4,0	0/0:10,0:9:26.96:0,27,445	0/1:31,1:6:4.32:4,0,126	0/0:50,0:13:23.93:0,24,234	0/0:16,2:17:8.23:0,8,157	0/1:10,1:10:13.11:13,0,108	0/0:22,0:18:14.76:0,15,274	1/1:4,15:15:38.98:511,39,0	0/0:18,0:17:0.74:0,1,147	0/1:27,1:27:26.34:26,0,888	0/0:12,0:12:18.05:0,18,310	0/0:15,0:15:11.41:0,11,148	0/1:17,0:16:2.22:2,0,223	0/0:11,0:11:11.74:0,12,218	0/1:7,0:7:0:0,0,0	1/1:15,0:15:2.91:20,3,0	0/0:22,0:20:17.84:0,18,509	1/1:0,7:6:12.03:153,12,0	0/0:16,0:13:22.53:0,23,435	0/0:25,0:24:48.15:0,48,861	0/0:25,0:20:33.11:0,33,597	0/0:16,0:15:2.93:0,3,57	0/1:7,0:7:0:0,0,0	0/0:18,0:13:5.84:0,6,115	0/0:11,0:11:14.64:0,15,241	0/1:1,10:10:30.90:243,0,31	0/0:20,0:20:16.77:0,17,492	1/1:1,1:2:2.04:43,2,0
chr10	98399777	.	T	TGA	261.68	PASS	AB=0.943;AC=17;AF=0.370;AN=46;BaseQRankSum=0.299;DP=490;FS=0.000;HRun=0;HaplotypeScore=121.8023;InbreedingCoeff=0.2606;MQ=50.63;MQ0=44;MQRankSum=-1.143;QD=1.25;ReadPosRankSum=-1.388;VQSLOD=1.7609;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:11:0.42:0,0,1	0/1:9,1:9:26.12:38,0,26	./.	0/1:47,0:13:0:0,0,0	0/0:20,0:19:0.41:0,0,1	1/1:12,0:11:6.42:62,6,0	0/1:19,1:17:0.06:0,0,0	./.	1/1:9,7:18:5.97:70,6,0	0/0:27,0:26:15.75:0,16,131	./.	1/1:10,6:16:2.60:41,3,0	0/1:16,3:18:20.51:86,0,21	1/1:13,0:13:1.57:40,2,0	0/0:11,0:11:0:0,0,0	0/1:15,0:15:0:0,0,0	0/1:18,3:19:34.14:35,0,34	0/0:5,0:6:2.88:0,3,15	0/0:17,0:14:12.03:0,12,125	0/0:26,0:25:2.66:0,3,32	./.	./.	0/0:9,0:9:0.47:0,0,1	0/0:10,7:13:2.68:0,3,32	0/1:14,0:14:0.09:0,0,1	0/0:13,0:13:11.43:0,11,94	0/0:18,0:20:17.12:0,17,152	1/1:2,0:2:1.25:3,1,0
chr10	98400290	.	AATG	A	1850.70	PASS	AB=0.523;AC=5;AF=0.089;AN=56;BaseQRankSum=10.913;DP=711;FS=4.251;HRun=0;HaplotypeScore=122.5666;InbreedingCoeff=0.8566;MQ=83.61;MQ0=0;MQRankSum=-11.695;QD=26.44;ReadPosRankSum=-2.014;VQSLOD=3.4539;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:15.25:0,15,513	0/0:8,0:8:24.07:0,24,506	0/0:25,0:25:69.22:0,69,1403	0/0:26,0:26:61.47:0,61,1460	0/0:24,0:24:72.25:0,72,1666	0/0:24,0:24:72.25:0,72,1674	0/0:28,0:28:78.27:0,78,1799	1/1:10,33:43:99:1204,103,0	0/0:28,0:28:81.28:0,81,1913	0/0:34,0:34:96.31:0,96,2157	0/0:22,0:22:63.20:0,63,1432	0/0:28,0:28:81.20:0,81,1714	0/0:23,0:23:69.21:0,69,1495	0/0:26,0:26:75.22:0,75,1600	0/0:33,0:33:99:0,99,2341	0/0:43,0:43:99:0,100,1708	0/0:22,0:22:66.21:0,66,1503	0/0:17,0:17:44.69:0,45,338	0/0:19,0:19:57.15:0,57,1232	0/0:24,0:24:69.19:0,69,1541	0/0:30,0:30:90.30:0,90,2058	0/0:28,0:28:84.29:0,84,1986	0/0:21,0:21:63.22:0,63,1475	0/0:27,0:27:81.26:0,81,1867	0/0:27,0:27:81.28:0,81,1915	0/1:2,21:23:1.84:642,0,2	0/0:22,0:21:66.23:0,66,1548	1/1:0,4:4:12.03:130,12,0
chr10	98400297	.	AAGG	A	2041.39	PASS	AB=0.523;AC=5;AF=0.089;AN=56;BaseQRankSum=12.624;DP=709;FS=1.617;HRun=0;HaplotypeScore=122.6436;InbreedingCoeff=0.8344;MQ=82.15;MQ0=0;MQRankSum=-11.680;QD=32.40;ReadPosRankSum=-0.388;VQSLOD=4.0357;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.28:0,84,1913	0/0:8,0:8:24.08:0,24,538	0/0:21,0:21:63.19:0,63,1388	0/0:27,0:27:67.28:0,67,1746	0/0:24,0:24:72.23:0,72,1703	0/0:26,0:26:78.27:0,78,1881	0/0:27,0:27:81.28:0,81,1906	1/1:0,35:35:99:1294,102,0	0/0:28,0:28:84.27:0,84,1996	0/0:33,0:33:99:0,99,2430	0/0:21,0:21:63.22:0,63,1521	0/0:25,0:25:75.23:0,75,1701	0/0:23,0:23:69.24:0,69,1603	0/0:24,0:24:72.25:0,72,1699	0/0:36,0:36:99:0,108,2590	0/0:42,0:42:99:0,126,3064	0/0:23,0:23:69.24:0,69,1651	0/0:19,0:19:54.16:0,54,1158	0/0:23,0:23:69.23:0,69,1550	0/0:24,0:24:66.23:0,66,1577	0/0:32,0:32:96.33:0,96,2297	0/0:28,0:28:84.27:0,84,2019	0/0:24,0:24:72.24:0,72,1696	0/0:27,0:27:81.28:0,81,1968	0/0:28,0:28:84.29:0,84,2045	0/1:2,21:23:4.14:731,0,4	0/0:24,0:23:72.25:0,72,1733	1/1:1,4:5:12.04:142,12,0
chr10	98400595	.	CAGG	C	3001.24	PASS	AB=0.591;AC=11;AF=0.196;AN=56;BaseQRankSum=13.076;DP=633;FS=0.000;HRun=0;HaplotypeScore=106.4548;InbreedingCoeff=0.8828;MQ=57.96;MQ0=9;MQRankSum=-8.765;QD=28.58;ReadPosRankSum=-0.892;VQSLOD=3.2189;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:32.99:480,33,0	0/0:9,0:9:27.09:0,27,605	0/0:30,0:20:40.47:0,40,662	0/0:23,0:14:39.09:0,39,690	0/0:14,0:14:33.09:0,33,674	0/0:9,0:9:27.06:0,27,494	0/0:54,0:54:99:0,150,3107	1/1:2,21:22:59.96:732,60,0	0/0:29,0:29:87.25:0,87,1794	0/0:18,0:18:45.09:0,45,945	0/0:10,0:10:21.07:0,21,484	0/0:27,0:27:78.23:0,78,1595	0/0:23,0:23:66.15:0,66,1337	0/0:22,0:22:66.16:0,66,1383	0/0:33,0:33:96.29:0,96,1999	1/1:0,18:18:42.50:649,42,0	0/0:29,0:29:81.23:0,81,1730	0/1:4,9:13:99:246,0,175	0/0:23,0:22:60.17:0,60,1145	0/0:8,0:8:18.03:0,18,324	0/0:78,0:76:99:0,225,4500	0/0:11,0:11:27.02:0,27,552	0/0:9,0:8:24.04:0,24,358	0/0:37,0:37:99:0,105,2036	0/0:15,0:15:41.99:0,42,798	1/1:2,16:18:48:667,48,0	0/0:17,0:17:48.13:0,48,988	1/1:0,10:10:24.08:406,24,0
chr10	98400706	.	G	GAGC	2649.51	PASS	AB=0.556;AC=11;AF=0.196;AN=56;BaseQRankSum=-1.902;DP=488;FS=3.664;HRun=0;HaplotypeScore=77.6912;InbreedingCoeff=0.8500;MQ=57.09;MQ0=12;MQRankSum=-5.120;QD=42.06;ReadPosRankSum=-0.864;VQSLOD=4.5533;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,11:14:27.09:563,27,0	0/0:9,0:9:27.06:0,27,386	0/0:24,0:13:36.57:0,37,535	0/0:21,0:13:35.71:0,36,504	0/0:8,0:6:18.06:0,18,285	0/0:12,0:10:23.26:0,23,298	0/0:26,0:26:72.23:0,72,1126	1/1:3,5:7:18.03:315,18,0	0/0:26,0:26:72.23:0,72,1131	0/0:21,0:19:54.18:0,54,846	0/0:2,0:2:6.02:0,6,96	0/0:23,0:23:66.18:0,66,1032	0/0:19,0:19:54.18:0,54,867	0/0:24,0:24:69.21:0,69,1056	0/0:26,0:26:75.24:0,75,1173	0/1:1,4:5:36.16:186,0,36	0/0:17,0:17:45.12:0,45,674	1/1:0,15:16:42.14:900,42,0	0/0:20,0:19:48.14:0,48,728	0/0:8,0:8:18.06:0,18,289	0/0:60,0:60:99:0,158,2467	0/0:7,0:7:12.03:0,12,170	0/0:9,0:9:27.08:0,27,408	0/0:37,0:37:99:0,99,1511	0/0:7,0:7:18.06:0,18,289	1/1:2,8:9:24.08:528,24,0	0/0:18,0:18:45.15:0,45,721	1/1:2,6:8:18.04:335,18,0
chr10	98400964	.	GT	G	2483.11	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.111;DP=707;FS=0.000;HRun=6;HaplotypeScore=77.7802;InbreedingCoeff=0.9988;MQ=77.79;MQ0=1;MQRankSum=-3.223;QD=27.59;ReadPosRankSum=-1.727;VQSLOD=3.3601;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1285	0/0:15,0:15:45.15:0,45,592	0/0:21,0:22:22.06:0,22,492	0/0:19,0:19:42.11:0,42,501	0/0:24,0:24:69.21:0,69,893	0/0:16,0:16:42.14:0,42,552	0/0:23,0:23:69.22:0,69,907	1/1:5,29:34:87.20:926,87,0	0/0:23,0:23:63.19:0,63,814	0/0:32,0:32:93.30:0,93,1223	0/0:16,0:16:42.12:0,42,538	0/0:32,0:32:90.29:0,90,1183	0/0:23,0:23:66.21:0,66,868	0/0:25,0:25:75.23:0,75,972	0/0:24,0:24:69.22:0,69,908	0/0:34,0:33:99:0,102,1341	0/0:23,0:23:69.22:0,69,907	0/0:24,0:24:72.23:0,72,943	0/0:18,0:18:51.16:0,51,658	0/0:28,0:28:78.25:0,78,1022	0/0:25,0:25:69.22:0,69,908	0/0:30,0:30:84.03:0,84,1062	0/0:18,0:18:39.11:0,39,498	0/0:46,0:46:99:0,129,1680	0/0:24,0:24:69.22:0,69,906	1/1:1,22:23:63.14:669,63,0	0/0:18,0:18:54.18:0,54,710	1/1:0,33:33:96.24:1031,96,0
chr10	98401958	.	GGGGAGAGAGAGAGAGAGAGAGA	G	762.24	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=-0.667;DP=386;FS=8.927;HRun=0;HaplotypeScore=136.1247;InbreedingCoeff=0.1717;MQ=60.94;MQ0=31;MQRankSum=0.937;QD=7.86;ReadPosRankSum=1.615;VQSLOD=2.2547;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:94.17:94,0,1617	0/0:1,0:1:3.01:0,3,285	0/1:15,0:7:0.83:1,0,20	0/0:7,0:4:5.65:0,6,47	0/0:6,0:5:8.96:0,9,585	0/0:13,0:11:0:0,0,0	0/0:26,0:24:18.06:0,18,995	0/1:25,0:24:99:190,0,1338	0/1:14,0:12:18.51:19,0,193	0/0:11,0:11:21.05:0,21,1211	0/0:3,0:3:4.82:0,5,31	0/0:15,0:14:12:0,12,750	0/0:14,0:12:29.77:0,30,1076	0/0:17,0:12:22.76:0,23,781	0/0:17,0:12:11.73:0,12,609	1/1:2,14:16:12.04:575,12,0	0/0:24,0:22:14.86:0,15,779	0/0:18,0:25:6.34:0,6,1979	0/0:11,0:11:24.05:0,24,902	0/0:9,0:9:12.03:0,12,652	0/0:14,0:14:15.03:0,15,796	0/0:10,0:9:8.17:0,8,209	0/0:9,0:8:11.37:0,11,297	0/0:26,0:19:15.05:0,15,1176	0/0:8,0:8:18.48:0,18,980	0/0:8,0:5:8.52:0,9,135	0/0:4,0:4:9.01:0,9,259	0/0:9,0:5:5.11:0,5,426
chr10	98401960	.	G	GGGA	836.13	PASS	AB=0.788;AC=29;AF=0.518;AN=56;BaseQRankSum=0.892;DP=382;FS=19.611;HRun=0;HaplotypeScore=66.4817;InbreedingCoeff=0.2147;MQ=60.38;MQ0=31;MQRankSum=-2.861;QD=3.47;ReadPosRankSum=-1.535;VQSLOD=-0.7172;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:49.42:0,49,322	1/1:1,0:2:3.01:42,3,0	0/0:15,0:7:3.45:0,3,24	0/0:7,0:4:6.06:0,6,36	1/1:5,0:4:6:64,6,0	1/1:2,1:10:0.89:2,1,0	0/1:7,0:23:3.13:62,0,3	0/0:27,0:26:23.29:0,23,194	0/1:2,0:12:8.75:41,0,9	0/1:9,0:9:7.84:8,0,108	0/0:3,0:3:2.27:0,2,22	1/1:3,0:13:9.03:110,9,0	1/1:10,0:12:18.92:182,19,0	1/1:13,0:14:11.21:78,11,0	1/1:4,0:11:9.90:109,10,0	0/0:16,0:16:11.83:0,12,79	0/1:5,0:22:7.16:51,0,7	0/0:28,0:26:17.67:0,18,218	0/0:11,0:11:12.24:0,12,95	0/1:9,0:9:12.91:13,0,57	0/1:13,0:13:10.06:10,0,82	1/1:4,0:10:2.37:17,2,0	1/1:8,0:7:6.54:32,7,0	0/1:10,0:19:21.85:110,0,22	0/0:6,0:6:14.16:0,14,102	1/1:6,0:3:6.54:27,7,0	0/1:3,0:4:18.38:38,0,18	0/1:9,0:5:14.98:15,0,32
chr10	98402286	.	ATGTGCGCGCGCG	A	467.55	PASS	AB=0.600;AC=5;AF=0.093;AN=54;BaseQRankSum=1.906;DP=301;FS=1.765;HRun=0;HaplotypeScore=94.4433;InbreedingCoeff=0.3722;MQ=52.85;MQ0=17;MQRankSum=-4.462;QD=17.32;ReadPosRankSum=-0.631;VQSLOD=1.5197;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,10:15:2.77:115,3,0	0/0:6,0:5:15.05:0,15,778	1/1:2,0:1:1.25:3,1,0	0/0:10,0:4:3.01:0,3,39	0/0:10,0:10:30.10:0,30,1485	0/0:9,0:8:11.84:0,12,546	0/0:18,0:16:43.56:0,44,1515	0/0:15,0:14:32.13:0,32,846	0/0:9,0:9:17.10:0,17,764	0/0:17,0:16:44.74:0,45,1701	0/0:8,0:8:24.08:0,24,1271	0/0:12,0:10:15.05:0,15,749	0/0:9,0:8:16.88:0,17,654	0/0:12,0:11:23.82:0,24,882	0/0:5,0:4:12.03:0,12,410	./.	0/0:22,0:22:41.35:0,41,1577	0/1:3,6:9:27.10:443,0,27	0/0:14,0:12:36.12:0,36,1390	0/0:4,0:4:12.04:0,12,595	0/0:24,0:22:54.19:0,54,2338	0/0:5,0:5:12.01:0,12,450	0/0:7,0:7:9.50:0,10,398	0/0:13,0:13:14.33:0,14,657	0/0:13,0:13:30.57:0,31,1637	0/0:16,0:15:31.05:0,31,1136	0/0:4,0:4:12.04:0,12,420	0/0:6,0:5:2.97:0,3,148
chr10	98402299	.	C	CGT	170.17	PASS	AB=0.800;AC=6;AF=0.111;AN=54;BaseQRankSum=5.304;DP=367;FS=0.000;HRun=0;HaplotypeScore=82.2568;InbreedingCoeff=0.3190;MQ=41.81;MQ0=24;MQRankSum=-3.945;QD=4.60;ReadPosRankSum=-3.169;VQSLOD=1.7274;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:2.62:0,3,25	0/0:8,0:7:18.02:0,18,247	0/0:2,0:1:0:0,0,0	./.	0/0:12,0:11:27.09:0,27,407	0/0:13,0:12:12.47:0,12,139	0/0:18,0:15:15.06:0,15,240	1/1:5,5:9:13.80:132,14,0	0/0:11,0:11:5.94:0,6,57	0/0:23,0:21:20.19:0,20,465	0/0:11,0:11:21.04:0,21,277	0/0:18,0:15:12.01:0,12,159	0/0:10,0:9:8.53:0,9,115	0/0:14,0:13:5.09:0,5,125	0/0:10,0:9:6.02:0,6,87	1/1:8,0:8:0.54:1,1,0	0/0:28,0:28:33.89:0,34,447	0/0:13,0:12:19.09:0,19,160	0/0:11,0:9:24.07:0,24,341	0/0:12,0:12:12.02:0,12,162	0/0:25,0:22:39.06:0,39,517	0/0:7,0:7:2.92:0,3,17	0/0:12,0:12:6.01:0,6,72	0/0:18,0:18:12.02:0,12,154	0/0:18,0:18:27.04:0,27,421	0/1:4,8:10:27.62:132,0,28	0/0:8,0:7:19.05:0,19,146	0/1:7,0:6:11.57:12,0,38
chr10	98403326	.	T	TG	2110.01	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=0.205;DP=530;FS=0.000;HRun=6;HaplotypeScore=54.0959;InbreedingCoeff=0.9995;MQ=84.75;MQ0=0;MQRankSum=-2.616;QD=31.03;ReadPosRankSum=-0.144;VQSLOD=3.8737;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:30:75.24:941,75,0	0/0:18,0:18:51.11:0,51,520	0/0:15,1:16:30.64:0,31,332	0/0:16,0:16:44.95:0,45,429	0/0:21,0:21:60.12:0,60,605	0/0:22,0:22:60.13:0,60,612	0/0:19,0:19:54.10:0,54,543	0/0:22,0:22:42.08:0,42,425	0/0:22,0:22:60.13:0,60,612	0/0:23,0:23:57.13:0,57,582	0/0:13,0:13:33.07:0,33,336	0/0:15,0:15:39.05:0,39,387	0/0:14,0:14:42.10:0,42,429	0/0:22,0:22:60.14:0,60,612	0/0:14,0:14:42.10:0,42,429	0/0:17,0:17:51.10:0,51,514	0/0:26,0:26:63.12:0,63,636	1/1:0,15:15:42.13:528,42,0	0/0:19,0:19:54.09:0,54,542	0/0:20,0:20:54.10:0,54,543	0/0:19,0:19:45.10:0,45,459	0/0:20,0:20:54.11:0,54,544	0/0:15,0:15:33.07:0,33,336	0/0:11,0:11:33.08:0,33,337	0/0:17,0:17:45.08:0,45,451	1/1:3,20:23:63.20:783,63,0	0/0:19,0:19:54.12:0,54,548	0/0:22,0:22:63.14:0,63,643
chr10	98403434	.	CT	C	517.76	PASS	AB=0.909;AC=5;AF=0.089;AN=56;BaseQRankSum=6.956;DP=486;FS=0.663;HRun=11;HaplotypeScore=56.6661;InbreedingCoeff=0.7425;MQ=73.71;MQ0=0;MQRankSum=-1.267;QD=10.79;ReadPosRankSum=2.852;VQSLOD=2.8187;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,17:25:39.85:341,40,0	0/0:4,0:4:9.02:0,9,96	0/1:9,1:10:7.09:7,0,104	0/0:9,0:9:10.42:0,10,72	0/0:31,1:32:53.55:0,54,775	0/0:12,0:12:30.07:0,30,314	0/0:19,0:19:48.12:0,48,510	0/0:27,0:27:57.14:0,57,608	0/0:24,0:24:60.15:0,60,640	0/0:11,0:11:30.08:0,30,320	0/0:11,0:11:18.03:0,18,183	0/0:14,0:14:36.09:0,36,384	0/0:19,0:20:47.87:0,48,461	0/0:13,1:14:14.44:0,14,352	0/0:20,0:20:48.10:0,48,499	0/0:20,0:20:39.10:0,39,416	0/0:18,0:18:45.10:0,45,473	1/1:0,13:13:35.96:296,36,0	0/0:23,2:26:22.72:0,23,636	0/0:17,0:18:44.94:0,45,455	0/0:22,0:22:48.07:0,48,493	0/0:13,0:13:36.09:0,36,384	0/0:21,1:23:44.40:0,44,660	0/0:15,0:15:33.08:0,33,352	0/0:13,1:14:8.44:0,8,295	0/0:6,0:15:26.03:0,26,164	0/0:24,0:24:67.39:0,67,691	0/0:13,0:13:33.08:0,33,352
chr10	98403483	.	ACTT	A	1415.04	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.831;DP=459;FS=3.288;HRun=0;HaplotypeScore=65.3888;InbreedingCoeff=0.9648;MQ=80.08;MQ0=0;MQRankSum=-5.796;QD=40.43;ReadPosRankSum=-0.199;VQSLOD=4.2681;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:72.23:1169,72,0	0/0:6,0:6:18.06:0,18,408	0/0:18,0:17:48.15:0,48,949	0/0:7,0:7:9.01:0,9,155	0/0:25,0:25:75.26:0,75,1698	0/0:18,0:18:54.17:0,54,1180	0/0:15,0:15:39.11:0,39,796	0/0:25,0:25:75.26:0,75,1701	0/0:20,0:20:57.20:0,57,1289	0/0:18,0:18:54.19:0,54,1220	0/0:14,0:14:42.14:0,42,950	0/0:15,0:15:42.14:0,42,952	0/0:15,0:15:42.13:0,42,891	0/0:12,0:12:36.12:0,36,788	0/0:9,0:9:27.09:0,27,612	0/0:21,0:21:60.21:0,60,1357	0/0:12,0:12:36.04:0,36,765	1/1:1,7:8:24.03:367,24,0	0/0:20,0:20:54.18:0,54,1149	0/0:15,0:15:45.15:0,45,1019	0/0:14,0:14:42.12:0,42,907	0/0:12,0:12:33.11:0,33,747	0/0:33,0:33:99:0,99,2157	0/0:14,0:14:42.13:0,42,909	0/0:16,0:16:48.16:0,48,1083	0/0:16,0:16:48.16:0,48,1086	0/0:19,0:19:54.19:0,54,1222	0/0:15,0:15:39.12:0,39,831
chr10	98404509	.	AGT	A	591.60	PASS	AB=0.937;AC=7;AF=0.125;AN=56;BaseQRankSum=3.584;DP=921;FS=1.213;HRun=0;HaplotypeScore=137.1729;InbreedingCoeff=0.4771;MQ=58.40;MQ0=21;MQRankSum=0.176;QD=4.11;ReadPosRankSum=0.929;VQSLOD=2.5922;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:87.26:0,87,925	1/1:1,8:11:26.63:275,27,0	0/0:34,0:16:20.65:0,21,249	0/0:53,0:26:27.05:0,27,318	1/1:6,19:25:27.07:318,27,0	0/0:20,1:21:27.87:0,28,854	0/1:36,1:38:1.37:1,0,859	0/0:38,0:38:61.50:0,61,591	0/0:42,0:42:92.51:0,93,1386	0/0:32,1:33:25.62:0,26,1047	0/0:28,0:29:63.20:0,63,935	0/0:26,2:29:4.03:0,4,885	0/0:19,0:19:42.14:0,42,648	0/1:39,3:41:54.48:54,0,1002	0/0:48,0:48:85.08:0,85,1356	0/0:32,0:27:5.45:0,5,47	0/0:20,0:20:48.16:0,48,746	0/0:24,0:23:35.87:0,36,388	0/1:24,3:24:78.43:78,0,236	0/0:18,4:22:18.52:0,19,689	0/0:82,2:82:64.47:0,64,2296	0/0:28,0:28:43.16:0,43,1005	0/0:19,0:19:41.68:0,42,649	0/0:46,3:50:43.63:0,44,1509	0/0:22,2:24:20.39:0,20,736	0/0:42,2:44:32.38:0,32,963	0/0:30,0:30:63.11:0,63,908	0/0:5,0:5:6.01:0,6,63
chr10	98404530	.	G	GTGTA	3137.03	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=2.527;DP=980;FS=6.804;HRun=0;HaplotypeScore=187.3459;InbreedingCoeff=0.4820;MQ=55.97;MQ0=25;MQRankSum=2.171;QD=16.25;ReadPosRankSum=-2.695;VQSLOD=2.2815;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,18:54:99:1839,111,0	0/0:13,0:13:29.97:0,30,340	0/0:48,0:24:48.70:0,49,463	0/0:67,0:27:50.92:0,51,524	0/0:28,0:28:44.72:0,45,457	0/0:27,0:27:72.14:0,72,1112	0/0:44,0:44:50.12:0,50,1250	0/1:42,0:35:99:271,0,181	0/0:38,0:39:74.78:0,75,1584	0/0:35,0:34:86.47:0,86,1365	0/0:32,0:32:82.82:0,83,1122	0/0:30,0:30:61.25:0,61,1133	0/0:20,0:20:57.11:0,57,841	0/0:38,0:37:89.85:0,90,1289	0/0:40,0:40:99:0,109,1624	0/1:31,0:26:39.69:188,0,40	0/0:19,0:19:57.12:0,57,883	1/1:19,5:23:54.01:960,54,0	0/0:30,0:26:51.99:0,52,601	0/0:25,0:25:57.11:0,57,855	0/0:89,0:87:99:0,225,3097	0/0:31,0:31:87.15:0,87,1258	0/0:19,0:19:48.14:0,48,773	0/0:57,0:57:99:0,149,2010	0/0:26,0:26:66.11:0,66,933	0/1:42,0:42:21.09:21,0,641	0/0:25,0:25:59.81:0,60,942	0/0:4,0:4:3.89:0,4,28
chr10	98404575	.	ATG	A	1638.15	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.796;DP=875;FS=27.122;HRun=0;HaplotypeScore=129.9479;InbreedingCoeff=0.9244;MQ=58.96;MQ0=4;MQRankSum=0.439;QD=24.45;ReadPosRankSum=2.485;VQSLOD=2.4790;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,36:41:86.98:1097,87,0	0/0:15,0:15:30.09:0,30,467	0/0:27,0:13:18:0,18,236	0/0:24,0:12:9:0,9,100	0/0:26,1:27:26.58:0,27,1002	0/0:22,0:22:60.18:0,60,966	0/0:49,0:49:99:0,135,2086	0/0:24,1:25:34.38:0,34,1102	0/0:37,0:37:87.30:0,87,1442	0/0:33,0:32:84.26:0,84,1327	0/0:28,0:28:72.23:0,72,1154	0/0:24,1:25:28.36:0,28,947	0/0:30,0:30:84.25:0,84,1334	0/0:30,0:30:81.28:0,81,1332	0/0:40,1:41:73.58:0,74,1698	0/0:27,0:27:69.24:0,69,1146	0/0:29,0:29:78.24:0,78,1268	1/1:3,23:26:54.13:663,54,0	0/0:32,0:32:58.50:0,58,1172	0/0:22,0:22:66.23:0,66,1096	0/0:86,1:87:99:0,217,3474	0/0:27,0:27:69.24:0,69,1140	0/0:30,0:30:72.19:0,72,1117	0/0:54,1:55:99:0,113,2392	0/0:23,0:23:51.16:0,51,815	0/0:10,0:34:81.06:0,81,766	0/0:20,1:22:8.19:0,8,793	0/0:7,0:7:14.26:0,14,198
chr10	98404858	.	TTAAC	T	2550.01	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.079;DP=663;FS=4.283;HRun=0;HaplotypeScore=107.4650;InbreedingCoeff=0.9611;MQ=68.37;MQ0=0;MQRankSum=-7.400;QD=43.22;ReadPosRankSum=-0.876;VQSLOD=3.9911;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,159,4082	0/0:10,0:10:27.09:0,27,713	0/0:17,0:17:48.16:0,48,1217	0/0:19,0:19:54.17:0,54,1233	0/0:32,0:32:93.32:0,93,2430	0/0:25,0:25:75.26:0,75,1971	0/0:30,0:30:90.31:0,90,2377	1/1:3,19:22:57.20:1048,57,0	0/0:12,0:12:36.12:0,36,922	0/0:26,0:26:72.23:0,72,1799	0/0:25,0:25:69.24:0,69,1782	0/0:19,0:19:51.16:0,51,1222	0/0:16,0:16:48.16:0,48,1257	0/0:24,0:24:72.25:0,72,1900	0/0:22,0:22:66.23:0,66,1725	0/0:20,0:20:57.20:0,57,1504	0/0:27,0:27:69.24:0,69,1822	0/0:25,0:25:69.24:0,69,1772	0/0:20,0:20:57.20:0,57,1449	0/0:24,0:24:66.23:0,66,1735	0/0:38,0:38:99:0,108,2797	0/0:29,0:29:84.26:0,84,2076	0/0:23,0:23:63.22:0,63,1634	0/0:29,0:29:84.29:0,84,2175	0/0:24,0:24:69.20:0,69,1705	1/1:3,27:31:84.29:1526,84,0	0/0:13,0:12:39.09:0,39,970	1/1:4,2:6:6.02:110,6,0
chr10	98405109	.	GAAA	G	2952.23	PASS	AB=0.731;AC=8;AF=0.143;AN=56;BaseQRankSum=6.981;DP=692;FS=6.202;HRun=12;HaplotypeScore=109.1250;InbreedingCoeff=0.7166;MQ=73.91;MQ0=1;MQRankSum=-1.455;QD=21.24;ReadPosRankSum=3.997;VQSLOD=2.4553;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,41:46:99:1269,102,0	0/0:15,0:15:36.12:0,36,695	0/0:31,0:28:46.28:0,46,697	0/1:12,0:13:16.04:16,0,221	0/0:24,0:26:70.44:0,70,1267	0/0:22,0:24:66.19:0,66,1216	0/0:20,0:22:63.19:0,63,1177	0/0:18,0:33:79.79:0,80,1270	0/0:22,0:22:51.18:0,51,1006	0/0:21,0:25:63.13:0,63,1072	0/0:21,0:22:60.18:0,60,1104	0/0:15,0:17:48.16:0,48,905	0/0:22,0:25:66.18:0,66,1165	0/0:16,0:16:45.15:0,45,888	0/0:30,0:30:84.27:0,84,1623	0/1:2,1:21:13.72:14,0,21	0/0:28,0:28:81.26:0,81,1522	1/1:0,28:28:72.22:910,72,0	0/0:19,0:23:57.17:0,57,1040	0/0:24,0:26:63.22:0,63,1208	0/0:20,0:22:54.14:0,54,961	0/0:27,0:31:78.19:0,78,1381	0/0:22,0:23:63.22:0,63,1212	0/0:22,0:25:63.19:0,63,1190	0/0:23,0:25:69.19:0,69,1266	1/1:5,24:29:72.18:897,72,0	0/0:30,0:29:81.26:0,81,1562	0/0:6,0:10:24.08:0,24,406
chr10	98406436	.	AT	A	513.24	PASS	AB=0.576;AC=1;AF=0.018;AN=56;BaseQRankSum=8.847;DP=735;FS=1.521;HRun=2;HaplotypeScore=75.9511;InbreedingCoeff=0.6025;MQ=86.77;MQ0=0;MQRankSum=-3.396;QD=15.10;ReadPosRankSum=1.479;VQSLOD=3.5439;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.29:0,87,1295	0/0:13,0:13:39.13:0,39,585	0/0:25,0:25:72.19:0,72,1004	0/0:27,0:27:74.45:0,74,1004	0/0:29,0:29:87.28:0,87,1284	0/0:17,0:17:51.16:0,51,744	0/0:16,0:16:48.16:0,48,714	0/0:36,0:36:99:0,105,1489	0/0:34,0:34:99:0,102,1501	0/0:28,0:28:84.28:0,84,1259	0/0:17,0:17:51.17:0,51,764	0/0:26,0:26:75.25:0,75,1124	0/0:31,0:31:93.31:0,93,1390	0/0:31,0:31:93.27:0,93,1332	0/0:30,0:30:90.30:0,90,1344	0/0:34,0:34:99:0,102,1502	0/0:21,0:21:63.21:0,63,944	0/0:21,0:21:57.19:0,57,850	0/0:26,0:26:75.25:0,75,1118	0/0:20,0:20:60.20:0,60,894	0/0:32,0:32:90.27:0,90,1303	0/0:29,0:29:87.29:0,87,1303	0/0:27,0:27:81.25:0,81,1165	0/0:41,0:41:99:0,120,1778	0/0:23,0:23:69.23:0,69,1034	0/1:9,25:34:1.01:588,0,1	0/0:25,0:25:75.25:0,75,1124	0/0:13,0:13:36.10:0,36,511
chr10	98406440	.	TAC	T	742.90	PASS	AB=0.561;AC=1;AF=0.018;AN=56;BaseQRankSum=9.018;DP=747;FS=1.515;HRun=0;HaplotypeScore=92.6270;InbreedingCoeff=-0.0182;MQ=89.75;MQ0=0;MQRankSum=-4.416;QD=23.22;ReadPosRankSum=0.964;VQSLOD=4.3214;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.18:0,81,834	0/0:14,0:14:42.10:0,42,811	0/0:28,0:28:81.02:0,81,1428	0/0:28,0:29:60.42:0,60,1346	0/0:31,0:31:93.26:0,93,1773	0/0:18,0:18:54.19:0,54,1081	0/0:18,0:18:54.19:0,54,1060	0/0:37,0:37:99:0,111,2142	0/0:34,0:34:99:0,99,1966	0/0:30,0:30:90.27:0,90,1730	0/0:18,0:18:54.15:0,54,1055	0/0:27,0:27:81.23:0,81,1563	0/0:32,0:32:96.29:0,96,1871	0/0:31,0:31:93.32:0,93,1832	0/0:30,0:30:90.29:0,90,1778	0/0:34,0:34:99:0,102,1984	0/0:21,0:21:63.22:0,63,1258	0/0:21,0:21:34.13:0,34,518	0/0:26,0:26:78.21:0,78,1493	0/0:19,0:19:57.20:0,57,1143	0/0:30,0:30:87.28:0,87,1710	0/0:32,0:32:96.25:0,96,1860	0/0:25,0:25:75.21:0,75,1463	0/0:42,0:42:99:0,126,2456	0/0:24,0:24:72.20:0,72,1421	0/1:7,25:32:65.53:817,0,66	0/0:27,0:27:81.26:0,81,1587	0/0:10,0:10:30.10:0,30,583
chr10	98407222	.	ACGTGCG	A	483.37	PASS	AB=0.970;AC=8;AF=0.143;AN=56;BaseQRankSum=5.479;DP=516;FS=0.000;HRun=0;HaplotypeScore=109.0839;InbreedingCoeff=0.2875;MQ=74.80;MQ0=7;MQRankSum=-2.042;QD=4.39;ReadPosRankSum=0.014;VQSLOD=2.0049;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:28:0.47:1,0,0	0/0:4,0:4:12.03:0,12,274	0/1:16,0:14:78.45:78,0,328	0/1:14,1:13:56.42:56,0,300	0/0:10,0:10:30.05:0,30,661	0/0:17,0:17:45.12:0,45,1210	0/0:39,0:39:99:0,102,2798	0/0:18,0:18:51.16:0,51,712	0/0:17,0:17:45.12:0,45,1189	0/0:20,0:20:60.19:0,60,1648	0/0:8,0:8:21.07:0,21,647	0/0:19,0:19:54.16:0,54,1447	0/0:17,0:17:42.09:0,42,1195	0/0:25,0:25:66.14:0,66,1496	0/0:19,0:19:48.12:0,48,1241	0/1:16,0:16:8.73:47,0,9	0/0:38,0:37:86.41:0,86,1670	1/1:3,20:23:18.06:411,18,0	0/0:20,0:20:57.17:0,57,1334	0/0:13,0:12:27.03:0,27,587	0/0:25,0:25:66.13:0,66,1377	0/0:15,0:15:42.01:0,42,1104	0/0:9,0:9:24.08:0,24,780	0/0:31,0:31:81.22:0,81,2355	0/0:16,0:16:38.65:0,39,982	0/1:9,0:9:17.97:18,0,312	0/0:14,0:13:36.05:0,36,764	0/0:12,0:10:1.63:0,2,90
chr10	98407223	.	CGT	C	318.77	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=6.466;DP=516;FS=6.895;HRun=0;HaplotypeScore=75.9058;InbreedingCoeff=0.4834;MQ=74.69;MQ0=8;MQRankSum=-2.799;QD=2.90;ReadPosRankSum=1.012;VQSLOD=1.1442;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:28:0:0,0,0	0/0:4,0:4:10.26:0,10,121	0/1:16,0:14:8.32:8,0,200	0/1:15,0:13:7.56:8,0,196	0/0:11,0:11:24.54:0,25,324	0/0:16,0:16:45.10:0,45,639	0/0:39,0:39:99:0,102,1444	0/0:18,0:18:8.69:0,9,71	0/0:17,0:17:45.11:0,45,626	0/0:20,0:20:60.13:0,60,867	0/0:7,0:7:21.04:0,21,318	0/0:20,0:20:54.53:0,55,749	0/0:17,0:17:42.08:0,42,602	0/0:25,0:25:63.11:0,63,798	0/0:19,0:19:48.07:0,48,644	1/1:0,15:15:18.05:212,18,0	0/0:39,0:38:89.25:0,89,951	1/1:20,3:23:18.03:175,18,0	0/0:19,0:19:57.11:0,57,725	0/0:11,0:10:27.03:0,27,345	0/0:25,0:25:66.06:0,66,759	0/0:18,0:18:44.59:0,45,592	0/0:9,0:9:24.08:0,24,394	0/0:31,0:31:81.05:0,81,1191	0/0:16,0:16:38.78:0,39,510	0/1:9,0:9:12.97:50,0,13	0/0:14,0:13:36.04:0,36,410	0/0:11,0:9:1.37:0,1,41
chr10	98407234	.	G	GCA	663.78	PASS	AB=0.928;AC=15;AF=0.313;AN=48;BaseQRankSum=-2.988;DP=542;FS=4.564;HRun=0;HaplotypeScore=96.1670;InbreedingCoeff=-0.0546;MQ=57.67;MQ0=15;MQRankSum=0.134;QD=2.57;ReadPosRankSum=2.040;VQSLOD=1.7868;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:5,0:5:15.16:54,0,15	./.	./.	0/0:14,0:14:7.62:0,8,51	0/1:16,0:16:41.04:41,0,76	0/0:40,6:48:8.06:0,8,59	./.	0/1:17,3:20:32.11:35,0,32	0/0:24,0:24:7.24:0,7,56	0/0:7,0:7:8.98:0,9,83	0/1:17,7:24:65.28:111,0,65	0/1:13,5:18:13.82:79,0,14	0/1:17,3:20:17.30:38,0,17	1/1:8,11:20:12.04:175,12,0	0/0:12,0:14:5.06:0,5,21	0/1:24,0:39:5.29:5,0,63	0/0:25,0:24:3.23:0,3,34	0/0:10,0:12:3.73:0,4,17	0/1:8,0:9:0:0,0,0	0/0:21,0:19:8.83:0,9,46	1/1:20,0:22:5.51:69,6,0	0/1:13,1:14:8.15:53,0,8	0/1:40,1:41:99:140,0,100	0/0:19,0:18:11.92:0,12,105	0/1:8,0:8:0:0,0,0	0/0:7,0:12:5.50:0,6,28	0/0:10,0:8:5.74:0,6,30
chr10	98407779	.	TA	T	898.86	PASS	AB=0.871;AC=12;AF=0.214;AN=56;BaseQRankSum=9.999;DP=598;FS=5.863;HRun=13;HaplotypeScore=76.8041;InbreedingCoeff=0.7611;MQ=71.44;MQ0=3;MQRankSum=-0.876;QD=7.13;ReadPosRankSum=1.590;VQSLOD=2.7380;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:22:40.74:118,41,0	0/0:16,0:16:39.06:0,39,379	0/0:32,0:16:8.71:0,9,178	0/0:22,0:17:3.80:0,4,42	0/0:32,1:36:57.53:0,58,661	0/0:22,3:25:19.27:0,19,504	0/0:20,0:20:50.82:0,51,479	1/1:1,8:9:17.87:129,18,0	0/0:19,2:21:13.29:0,13,442	0/0:22,2:24:26.06:0,26,399	0/1:18,2:20:4.78:5,0,272	0/0:13,1:16:16.99:0,17,313	0/0:16,0:17:25.60:0,26,374	0/0:20,0:20:51.07:0,51,488	0/0:12,0:12:10.21:0,10,238	0/0:17,1:17:16.77:0,17,352	0/0:22,1:23:29.28:0,29,444	1/1:1,0:21:31.01:90,31,0	0/0:28,1:31:13.43:0,13,452	0/0:26,2:29:43.84:0,44,535	0/0:7,0:7:15:0,15,137	0/0:21,3:24:10.20:0,10,397	0/0:27,1:29:31.19:0,31,469	0/1:7,1:10:4.78:5,0,141	0/0:24,0:26:59.89:0,60,560	1/1:6,25:31:71.51:525,72,0	0/0:18,2:20:25.96:0,26,381	1/1:0,11:12:28.88:203,29,0
chr10	98407802	.	AG	A	840.86	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.049;DP=618;FS=1.502;HRun=4;HaplotypeScore=71.4881;InbreedingCoeff=0.9900;MQ=72.32;MQ0=3;MQRankSum=-2.468;QD=27.12;ReadPosRankSum=0.624;VQSLOD=2.9334;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:72.21:0,72,959	0/0:11,0:11:33.11:0,33,453	0/0:27,0:16:32.88:0,33,438	0/0:21,0:15:20.03:0,20,240	0/0:34,0:34:90.25:0,90,1176	0/0:24,0:24:72.21:0,72,958	0/0:22,0:22:54.14:0,54,695	0/0:16,0:16:44.96:0,45,478	0/0:21,0:21:57.16:0,57,749	0/0:27,0:27:72.22:0,72,936	0/0:21,0:21:60.15:0,60,787	0/0:23,0:23:63.15:0,63,829	0/0:14,0:14:33.09:0,33,438	0/0:19,0:19:48.15:0,48,642	0/0:20,0:20:57.15:0,57,738	0/0:26,0:25:69.15:0,69,865	0/0:22,0:22:57.14:0,57,719	0/0:21,0:21:54.10:0,54,688	0/0:30,0:30:90.26:0,90,1183	0/0:29,0:29:75.22:0,75,1001	0/0:9,0:9:24.08:0,24,330	0/0:22,0:22:63.18:0,63,821	0/0:26,0:26:72.21:0,72,959	0/0:12,0:12:24.11:0,24,424	0/0:27,0:27:75.21:0,75,993	1/1:6,25:31:81.22:936,81,0	0/0:22,0:22:57.14:0,57,731	0/0:14,0:14:36.08:0,36,461
chr10	98408175	.	AGT	A	468.02	PASS	AB=0.979;AC=19;AF=0.365;AN=52;BaseQRankSum=3.993;DP=719;FS=6.281;HRun=0;HaplotypeScore=99.0199;InbreedingCoeff=-0.1324;MQ=55.18;MQ0=32;MQRankSum=-0.787;QD=1.18;ReadPosRankSum=1.978;VQSLOD=1.0328;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:36:1.23:1,0,21	0/1:9,0:9:32.79:33,0,99	./.	./.	0/0:17,0:17:3.01:0,3,42	0/1:16,0:15:0.47:69,0,0	0/0:23,0:22:2.99:0,3,23	0/0:29,0:29:0:0,0,0	1/1:16,4:20:9.22:79,9,0	0/0:29,0:29:4.69:0,5,111	0/1:10,0:10:22.80:23,0,58	0/0:18,3:22:11.24:0,11,125	0/1:24,0:23:45:45,0,134	0/0:18,0:18:12.04:0,12,151	0/1:17,2:19:32.31:32,0,76	1/1:23,0:22:2.84:14,3,0	0/1:32,0:32:9.83:10,0,292	0/1:20,0:18:0.17:16,0,0	0/0:17,0:16:3.01:0,3,34	0/0:11,0:11:6.02:0,6,84	0/1:72,1:72:99:113,0,269	0/1:12,0:13:5.14:5,0,60	0/0:19,0:18:3.01:0,3,43	0/1:44,2:46:51.87:52,0,405	0/1:16,0:16:26.34:26,0,60	0/1:24,0:24:36.38:37,0,36	0/0:11,0:11:6:0,6,65	1/1:11,0:11:7.25:54,7,0
chr10	98408197	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	T	162.90	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=0.835;DP=718;FS=0.000;HRun=0;HaplotypeScore=400.2810;InbreedingCoeff=0.6463;MQ=48.69;MQ0=54;MQRankSum=-2.552;QD=8.14;ReadPosRankSum=-1.109;VQSLOD=0.5917;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:45:54.16:0,54,2517	0/0:10,0:10:27.09:0,27,2497	./.	0/0:50,0:4:5.23:0,5,102	0/0:13,0:13:18.06:0,18,1178	0/0:14,0:12:30.10:0,30,2277	0/0:22,0:20:28.31:0,28,1882	0/0:26,0:23:54.19:0,54,2518	0/0:20,0:19:36.25:0,36,3181	0/0:26,0:26:64.45:0,64,4291	0/0:12,0:11:21.54:0,22,2046	0/0:23,0:23:35.42:0,35,3087	0/0:28,0:27:59.01:0,59,5058	0/0:28,0:28:52.24:0,52,4292	0/0:22,0:22:52.10:0,52,4908	1/1:10,10:19:3:240,3,0	0/0:41,0:39:99:0,108,8351	0/0:31,0:26:35.48:0,35,1550	0/0:15,0:13:31.09:0,31,2221	0/0:10,0:10:15.05:0,15,1587	0/0:77,0:73:99:0,151,12803	0/0:14,0:12:24.55:0,25,2339	0/0:14,0:12:18.05:0,18,1099	0/0:46,0:46:96.31:0,96,8607	0/0:17,0:16:36.12:0,36,3347	0/0:32,0:31:75.24:0,75,4360	0/0:9,0:9:15.05:0,15,1115	0/0:8,0:7:18.06:0,18,1389
chr10	98408228	.	G	GGT	470.29	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=2.043;DP=636;FS=1.077;HRun=0;HaplotypeScore=87.5823;InbreedingCoeff=0.5633;MQ=58.29;MQ0=47;MQRankSum=-0.788;QD=5.28;ReadPosRankSum=-0.802;VQSLOD=2.4309;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,25:38:6.02:70,6,0	0/0:11,0:11:21.06:0,21,262	0/0:36,0:9:23.93:0,24,238	0/0:44,0:21:28.92:0,29,490	0/0:7,0:7:12.04:0,12,149	0/0:17,0:16:32.99:0,33,389	0/0:22,0:20:42.01:0,42,489	0/0:28,0:25:55.37:0,55,650	0/0:19,0:19:39.01:0,39,469	0/0:21,0:19:39.12:0,39,491	0/0:10,0:10:23.91:0,24,288	0/0:22,0:22:42.09:0,42,508	0/0:22,0:21:45.14:0,45,556	0/0:15,0:14:33.02:0,33,405	0/0:28,0:28:74.95:0,75,898	0/0:10,0:10:2.80:0,3,13	0/0:34,0:33:60.14:0,60,721	1/1:10,14:22:6:62,6,0	0/0:20,0:18:44.87:0,45,501	0/0:8,0:8:12.04:0,12,150	0/0:65,0:63:92.64:0,93,1397	0/0:18,0:17:32.94:0,33,401	0/0:7,0:6:17.99:0,18,205	0/0:50,0:51:92:0,92,1061	0/0:16,0:15:33.09:0,33,401	0/1:24,0:23:70.90:448,0,71	0/0:4,0:4:6.02:0,6,75	0/0:8,0:8:13.59:0,14,139
chr10	98409017	.	GTCA	G	2399.43	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=11.228;DP=802;FS=1.092;HRun=0;HaplotypeScore=120.7443;InbreedingCoeff=0.9996;MQ=87.08;MQ0=0;MQRankSum=-5.795;QD=32.87;ReadPosRankSum=3.072;VQSLOD=4.2904;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,42:46:93.32:1475,93,0	0/0:12,0:12:33.11:0,33,704	0/0:33,0:33:71.49:0,71,1796	0/0:23,0:24:63.20:0,63,1276	0/0:30,0:30:84.25:0,84,1747	0/0:20,0:20:60.18:0,60,1231	0/0:29,0:29:81.28:0,81,1691	0/0:31,0:31:87.29:0,87,1817	0/0:45,0:45:99:0,126,2693	0/0:25,0:25:75.26:0,75,1628	0/0:15,0:15:45.15:0,45,983	0/0:30,0:30:84.29:0,84,1829	0/0:26,0:26:69.24:0,69,1507	0/0:28,0:28:78.27:0,78,1688	0/0:31,0:31:84.29:0,84,1835	0/0:33,0:32:96.33:0,96,2098	0/0:32,0:32:93.31:0,93,1966	1/1:3,24:27:66.23:1047,66,0	0/0:28,0:28:75.26:0,75,1619	0/0:18,0:18:45.15:0,45,978	0/0:71,0:71:99:0,211,4453	0/0:26,0:26:72.25:0,72,1551	0/0:10,0:10:30.10:0,30,646	0/0:32,0:32:87.30:0,87,1902	0/0:21,0:21:57.20:0,57,1247	0/0:20,0:20:48.16:0,48,1004	0/0:44,0:43:99:0,126,2732	0/0:15,0:15:45.15:0,45,959
chr10	98409550	.	AT	A	921.83	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.638;DP=512;FS=17.485;HRun=9;HaplotypeScore=49.0752;InbreedingCoeff=0.9365;MQ=71.03;MQ0=0;MQRankSum=-1.585;QD=22.48;ReadPosRankSum=1.731;VQSLOD=2.4625;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:57.02:522,57,0	0/0:6,0:6:9.03:0,9,104	0/0:12,0:12:26.53:0,27,257	0/0:9,0:9:20.72:0,21,210	0/0:30,0:30:84.24:0,84,956	0/0:15,0:15:36.09:0,36,405	0/0:12,0:12:30.08:0,30,337	0/0:28,0:28:72.20:0,72,814	0/0:18,0:18:45.10:0,45,497	0/0:26,0:26:72.21:0,72,826	0/0:22,0:22:63.19:0,63,724	0/0:14,0:14:33.10:0,33,381	0/0:15,0:15:39.12:0,39,450	0/0:16,0:16:45.12:0,45,509	0/0:17,0:17:48.14:0,48,554	0/0:13,1:15:8.47:0,8,333	0/0:18,0:18:48.08:0,48,537	1/1:0,21:21:57.03:522,57,0	0/0:16,0:16:39.12:0,39,450	0/0:23,0:24:65.62:0,66,717	0/0:11,0:11:30.09:0,30,346	0/0:20,0:20:54.16:0,54,623	0/0:21,0:21:60.17:0,60,684	0/0:20,0:20:51.15:0,51,588	0/0:24,0:24:66.18:0,66,747	0/0:26,0:26:69.20:0,69,796	0/0:21,0:20:57.16:0,57,649	0/0:15,0:15:42.11:0,42,474
chr10	98409678	.	TA	T	926.94	PASS	AB=0.915;AC=7;AF=0.125;AN=56;BaseQRankSum=6.665;DP=536;FS=0.536;HRun=11;HaplotypeScore=59.3662;InbreedingCoeff=0.5186;MQ=75.45;MQ0=0;MQRankSum=-1.056;QD=8.91;ReadPosRankSum=0.786;VQSLOD=2.2356;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:30:68.90:566,69,0	0/0:12,0:12:33.08:0,33,351	0/0:16,0:17:20.50:0,21,144	0/1:14,0:11:14.68:15,0,45	0/0:26,0:26:60.13:0,60,625	0/0:18,0:18:42.09:0,42,439	0/0:15,0:15:33.06:0,33,339	0/0:29,1:30:35.84:0,36,554	0/0:15,0:15:42.11:0,42,448	0/0:13,0:13:30.08:0,30,320	0/0:11,1:12:11.45:0,11,327	0/0:15,1:16:5.43:0,5,263	0/0:19,0:19:36.09:0,36,384	0/0:21,0:21:48.08:0,48,488	0/0:16,0:17:38.95:0,39,391	0/0:17,0:17:41.30:0,41,415	0/0:23,1:24:29.48:0,29,511	1/1:4,22:26:56.93:468,57,0	0/1:14,3:17:10.25:10,0,299	0/0:26,0:26:57.09:0,57,592	0/0:15,0:15:44.78:0,45,459	0/0:16,0:16:39.04:0,39,380	0/0:25,0:25:54.04:0,54,553	0/0:25,3:28:22.85:0,23,639	0/0:17,0:17:42.08:0,42,437	0/0:25,1:26:69.16:0,69,728	0/1:15,2:17:4.17:4,0,364	0/0:7,0:7:21.05:0,21,222
chr10	98410777	.	AAAAG	A	522.29	PASS	AB=0.879;AC=6;AF=0.107;AN=56;BaseQRankSum=4.942;DP=641;FS=0.000;HRun=0;HaplotypeScore=113.1740;InbreedingCoeff=0.2709;MQ=58.12;MQ0=33;MQRankSum=-4.576;QD=4.18;ReadPosRankSum=-6.481;VQSLOD=-0.6651;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:33:43.02:43,0,419	0/0:13,0:13:36.10:0,36,748	0/0:26,0:9:1.23:0,1,82	0/0:21,0:14:25.16:0,25,264	0/0:31,0:28:68.55:0,69,1013	0/0:21,0:20:41.87:0,42,942	0/0:19,0:18:44.12:0,44,784	0/1:31,1:29:9.33:174,0,9	0/0:10,0:9:16.84:0,17,362	0/0:30,0:29:84.20:0,84,1405	0/0:24,0:22:57.09:0,57,964	0/0:20,0:18:51.05:0,51,873	0/0:18,0:16:39:0,39,621	0/0:14,0:13:16.40:0,16,521	0/0:12,0:12:33.04:0,33,607	0/1:4,19:22:8.99:332,0,9	0/0:48,0:46:99:0,126,2286	0/0:26,0:23:55.45:0,55,536	0/0:31,0:29:81.11:0,81,1364	0/0:16,0:16:41.88:0,42,665	0/0:21,0:20:30.80:0,31,882	0/0:18,0:16:45.25:0,45,640	0/0:18,0:16:37.28:0,37,635	0/0:37,0:35:76.55:0,77,1607	0/0:21,0:21:48.81:0,49,849	0/1:20,0:18:46.58:47,0,246	0/0:21,0:18:57:0,57,916	1/1:14,0:13:16.23:55,16,0
chr10	98410779	.	AAG	A	1368.67	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=6.425;DP=642;FS=8.150;HRun=0;HaplotypeScore=89.6490;InbreedingCoeff=0.5484;MQ=58.26;MQ0=31;MQRankSum=-6.670;QD=9.00;ReadPosRankSum=-5.755;VQSLOD=1.1119;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:35:59.94:160,0,60	0/0:13,0:13:36.07:0,36,487	0/0:26,0:9:0.91:0,1,66	0/0:22,0:14:17.48:0,17,150	0/0:31,0:28:48.50:0,49,620	0/0:21,0:20:42.54:0,43,591	0/0:19,0:18:30.57:0,31,483	1/1:27,4:28:70.85:628,71,0	0/0:10,0:9:16.91:0,17,231	0/0:30,0:29:83.93:0,84,967	0/0:23,0:22:56.69:0,57,630	0/0:20,0:18:51:0,51,597	0/0:18,0:16:38.82:0,39,411	0/0:14,0:13:16.10:0,16,348	0/0:13,0:13:36.02:0,36,442	1/1:23,0:22:14.20:229,14,0	0/0:47,0:45:99:0,123,1494	0/1:26,0:23:32.81:72,0,33	0/0:30,0:28:80.41:0,80,931	0/0:17,0:17:39.87:0,40,417	0/0:21,0:20:30.54:0,31,589	0/0:19,0:17:25.02:0,25,414	0/0:17,0:15:34.22:0,34,379	0/0:37,0:35:75.82:0,76,1063	0/0:20,0:20:39.86:0,40,540	0/1:20,0:19:54.48:130,0,54	0/0:22,0:19:40.86:0,41,622	1/1:4,10:13:24.02:307,24,0
chr10	98413660	.	A	AG	223.98	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=2.329;DP=89;FS=0.000;HRun=4;HaplotypeScore=16.0094;InbreedingCoeff=0.4164;MQ=74.92;MQ0=0;MQRankSum=-0.874;QD=22.40;ReadPosRankSum=0.251;VQSLOD=1.6975;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:21.06:0,21,238	./.	0/0:4,0:2:2.99:0,3,23	0/0:7,0:5:5.38:0,5,63	0/0:2,0:2:3.01:0,3,34	0/0:2,0:2:6.02:0,6,68	0/0:4,0:4:8.91:0,9,75	1/1:0,4:4:12.03:140,12,0	0/0:4,0:4:6.01:0,6,60	0/0:6,0:6:18.05:0,18,204	./.	0/0:8,0:8:18.05:0,18,203	0/0:3,0:3:8.70:0,9,79	0/0:1,0:1:3.01:0,3,34	0/0:3,0:3:5.79:0,6,68	1/1:0,4:4:12.04:163,12,0	0/0:1,0:1:3.01:0,3,34	0/0:4,0:4:12.03:0,12,136	0/0:2,0:2:6.01:0,6,60	0/0:3,0:3:6.90:0,7,70	0/0:6,0:6:15.03:0,15,162	0/0:2,0:2:6:0,6,58	0/0:2,0:2:5.60:0,6,43	0/0:3,0:3:3.01:0,3,34	0/0:1,0:1:3:0,3,26	0/0:1,0:1:2.97:0,3,20	1/1:1,0:1:1.25:3,1,0	1/1:0,1:1:3.01:37,3,0
chr10	98414548	.	T	TCACA	2132.42	PASS	AB=0.786;AC=21;AF=0.420;AN=50;BaseQRankSum=-4.558;DP=502;FS=1.667;HRun=0;HaplotypeScore=93.6370;InbreedingCoeff=0.3549;MQ=70.31;MQ0=11;MQRankSum=1.792;QD=9.52;ReadPosRankSum=0.535;VQSLOD=2.6543;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:31:6.18:0,6,36	0/1:3,0:4:16.59:17,0,63	./.	./.	0/0:10,0:13:4.94:0,5,160	1/1:15,1:15:5.74:229,6,0	0/1:18,5:24:21.97:65,0,22	1/1:19,0:18:0.47:1,0,0	0/1:15,6:23:31.50:264,0,32	0/0:10,0:10:12.01:0,12,128	0/0:12,0:12:18.06:0,18,280	1/1:5,5:10:9.03:212,9,0	1/1:10,3:14:2.80:70,3,0	0/1:7,4:13:37.94:132,0,38	1/1:11,7:22:18.42:309,18,0	0/0:11,0:11:9.03:0,9,140	0/0:19,0:23:19.48:0,19,272	0/0:11,0:12:3:0,3,28	0/0:15,0:14:6.02:0,6,90	0/0:11,0:11:12.02:0,12,157	0/0:22,0:21:5.66:0,6,93	1/1:7,6:15:6.02:141,6,0	./.	1/1:11,11:29:26.83:577,27,0	0/0:16,0:16:8.20:0,8,225	0/1:18,0:20:20.26:20,0,33	0/0:15,0:18:18.05:0,18,242	1/1:7,3:12:12.04:263,12,0
chr10	98414723	.	C	CA	3888.28	PASS	AB=0.785;AC=28;AF=0.500;AN=56;BaseQRankSum=0.267;DP=631;FS=2.608;HRun=11;HaplotypeScore=85.5559;InbreedingCoeff=0.5898;MQ=66.47;MQ0=7;MQRankSum=-1.087;QD=12.11;ReadPosRankSum=0.561;VQSLOD=3.6556;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:60.97:86,0,61	0/1:8,1:9:4.03:4,0,145	0/0:41,0:15:12.14:0,12,137	0/0:32,0:13:10.61:0,11,78	0/0:28,0:28:74.68:0,75,580	1/1:6,12:18:9.83:281,10,0	1/1:6,13:20:14.13:323,14,0	0/1:8,0:27:0.58:127,0,1	1/1:5,17:23:24.18:394,24,0	0/0:22,1:23:47.78:0,48,370	0/0:25,0:28:61.09:0,61,488	0/1:8,7:16:31.41:31,0,36	1/1:3,12:15:22.91:203,23,0	1/1:5,9:13:34.88:338,35,0	1/1:3,16:19:9.83:281,10,0	0/1:3,0:14:8.86:43,0,9	0/0:29,0:29:67.75:0,68,514	0/1:12,0:12:39.63:44,0,40	0/0:31,2:33:22.92:0,23,480	0/0:34,0:35:79.33:0,79,686	0/0:6,0:8:19.90:0,20,139	1/1:4,18:21:51.06:507,51,0	1/1:4,21:26:27.70:448,28,0	1/1:4,19:26:62.79:601,63,0	0/0:28,0:28:74.67:0,75,577	1/1:5,1:21:23.18:147,23,0	0/0:23,0:23:26.27:0,26,381	1/1:1,0:8:5.68:29,6,0
chr10	98414725	.	A	AC	539.92	PASS	AB=0.994;AC=14;AF=0.250;AN=56;BaseQRankSum=10.832;DP=641;FS=4.101;HRun=0;HaplotypeScore=98.7513;InbreedingCoeff=0.0782;MQ=66.86;MQ0=10;MQRankSum=1.764;QD=2.10;ReadPosRankSum=5.882;VQSLOD=1.8176;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,19:29:19.11:343,19,0	0/0:9,0:9:21.09:0,21,305	0/0:43,0:16:29.48:0,29,384	0/1:31,0:13:4.50:5,0,176	0/0:28,0:28:84.26:0,84,1123	0/1:17,0:17:24.69:25,0,84	0/1:19,0:19:3.12:3,0,133	0/0:28,0:27:68.36:0,68,492	0/1:26,0:26:13.57:14,0,138	0/0:26,0:25:60.14:0,60,774	0/0:30,0:30:81.06:0,81,1017	0/0:15,0:15:15.95:0,16,175	0/1:16,0:16:4.19:4,0,62	0/1:16,0:14:21.16:22,0,21	0/1:18,0:18:18.66:19,0,51	0/0:13,0:13:16.50:0,17,113	0/0:31,0:30:87.09:0,87,1071	1/1:6,6:12:5.24:167,5,0	0/0:34,0:33:90.10:0,90,1135	0/0:35,0:35:99:0,105,1360	0/0:8,0:8:21.04:0,21,269	0/1:20,0:19:6.52:31,0,7	0/1:26,0:26:22.04:22,0,80	0/1:25,0:25:40.03:41,0,40	0/0:29,0:28:81.26:0,81,1096	0/0:21,0:21:49.61:0,50,331	0/0:24,0:24:63.28:0,63,845	0/0:9,0:8:8.81:0,9,60
chr10	98414727	.	A	AC	57.86	PASS	AB=0.955;AC=9;AF=0.161;AN=56;BaseQRankSum=9.277;DP=649;FS=2.507;HRun=0;HaplotypeScore=100.7938;InbreedingCoeff=0.0334;MQ=67.35;MQ0=9;MQRankSum=2.164;QD=0.37;ReadPosRankSum=7.252;VQSLOD=0.8452;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,19:29:26.82:0,27,222	0/0:9,0:9:21.09:0,21,306	0/0:46,0:18:41.30:0,41,414	0/0:33,0:13:3.81:0,4,158	0/0:29,0:29:84.25:0,84,1124	0/1:16,0:16:30.11:30,0,70	0/0:20,0:20:1.87:0,2,160	0/0:28,0:27:65.87:0,66,496	0/1:26,0:26:8.28:8,0,188	0/0:28,0:27:66.15:0,66,830	0/0:31,0:31:90.01:0,90,1092	0/0:16,0:16:18.43:0,18,192	0/0:16,0:16:2.50:0,3,87	0/1:16,0:14:20.78:21,0,34	0/1:17,0:17:20.97:21,0,27	0/0:13,0:13:17.14:0,17,122	0/0:32,0:31:87.09:0,87,1075	0/1:7,6:13:4.48:4,0,89	0/0:35,0:34:90.07:0,90,1137	0/0:34,0:34:99:0,102,1341	0/0:9,0:9:21.04:0,21,267	1/1:20,0:19:17.59:53,18,0	0/1:26,0:26:16.06:16,0,116	0/1:24,0:24:30.01:43,0,30	0/0:28,0:27:78.25:0,78,1072	0/0:22,0:22:50.53:0,51,352	0/0:24,0:24:66.95:0,67,873	0/0:9,0:8:8.90:0,9,64
chr10	98414729	.	A	ACAAC	1426.39	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=8.214;DP=641;FS=2.063;HRun=0;HaplotypeScore=126.8836;InbreedingCoeff=0.7352;MQ=66.75;MQ0=9;MQRankSum=-8.349;QD=26.41;ReadPosRankSum=-0.145;VQSLOD=3.4524;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,19:30:65.64:1093,66,0	0/0:9,0:9:27.06:0,27,504	0/0:46,0:18:29.77:0,30,523	0/0:32,0:11:20.83:0,21,264	0/0:29,0:29:87.27:0,87,1727	0/0:14,0:14:36.12:0,36,529	0/0:20,0:20:54.15:0,54,775	0/0:27,0:26:41.92:0,42,548	0/0:24,0:24:57.08:0,57,815	0/0:28,0:27:74.38:0,74,1347	0/0:31,0:31:90.28:0,90,1676	0/0:16,0:16:23.73:0,24,349	0/0:15,0:15:30.02:0,30,403	0/0:16,0:14:42.13:0,42,564	0/0:17,0:17:33.11:0,33,493	0/1:12,0:12:17.05:17,0,81	0/0:32,0:31:90.13:0,90,1604	1/1:6,6:12:13.43:442,13,0	0/0:33,0:32:90.26:0,90,1699	0/0:34,0:34:99:0,102,2060	0/0:9,0:9:24.07:0,24,445	0/0:19,0:18:51.11:0,51,701	0/0:27,0:27:67.37:0,67,889	0/0:24,0:24:66.20:0,66,915	0/0:28,0:27:78.27:0,78,1627	0/0:20,0:20:12.25:0,12,263	0/0:27,0:27:78.22:0,78,1441	0/0:9,0:8:7.99:0,8,46
chr10	98415590	.	AAC	A	2425.54	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.564;DP=1031;FS=2.152;HRun=0;HaplotypeScore=148.5935;InbreedingCoeff=1.0000;MQ=55.93;MQ0=9;MQRankSum=-0.335;QD=32.78;ReadPosRankSum=-2.610;VQSLOD=4.7818;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:78.22:0,78,1140	0/0:16,0:16:45.13:0,45,733	0/0:60,0:28:77.67:0,78,1147	0/0:62,0:22:53.06:0,53,738	0/0:25,0:25:63.18:0,63,1030	0/0:22,0:22:60.19:0,60,976	0/0:22,0:22:54.17:0,54,880	1/1:6,51:55:99:1988,153,0	0/0:36,0:35:90.31:0,90,1506	0/0:52,0:52:99:0,141,2301	0/0:23,0:23:66.21:0,66,1096	0/0:33,0:33:81.12:0,81,1249	0/0:41,0:41:99:0,123,1978	0/0:34,0:34:99:0,102,1752	0/0:46,0:46:99:0,123,2064	0/0:47,0:47:99:0,120,1968	0/0:33,0:33:70.26:0,70,1243	0/0:30,0:29:72.61:0,73,1103	0/0:19,0:19:51.17:0,51,878	0/0:48,0:48:99:0,135,2220	0/0:91,0:91:99:0,235,3867	0/0:27,0:27:72.16:0,72,1178	0/0:32,0:32:78.25:0,78,1294	0/0:40,0:40:99:0,99,1707	0/0:23,0:23:63.20:0,63,1030	0/0:37,0:37:96.32:0,96,1633	0/0:22,0:20:60.10:0,60,974	1/1:1,16:17:42.61:559,43,0
chr10	98415624	.	TAC	T	713.42	PASS	AB=0.925;AC=11;AF=0.196;AN=56;BaseQRankSum=4.725;DP=914;FS=5.031;HRun=0;HaplotypeScore=133.5921;InbreedingCoeff=-0.0494;MQ=54.11;MQ0=19;MQRankSum=-2.960;QD=2.85;ReadPosRankSum=-2.500;VQSLOD=1.9805;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:8.36:0,8,89	0/1:10,3:13:42.55:43,0,289	0/0:42,0:15:4.52:0,5,24	0/0:46,0:20:5.97:0,6,66	0/1:13,1:14:11.72:12,0,227	0/0:16,2:18:0.79:0,1,419	0/0:20,0:20:1.47:0,1,467	1/1:47,6:47:33.54:509,34,0	0/0:41,1:42:23.32:0,23,1181	0/0:49,1:49:61.91:0,62,1258	0/1:14,0:14:4.51:5,0,389	0/0:28,0:28:54.03:0,54,752	0/0:39,0:39:90.26:0,90,1314	0/1:34,0:34:22.18:22,0,714	0/0:42,1:43:26.57:0,27,1272	0/0:44,1:45:38.27:0,38,1456	0/1:31,1:32:7.57:8,0,757	0/1:18,1:17:3.41:3,0,101	0/0:16,0:17:21.59:0,22,279	0/0:45,1:46:11.72:0,12,1033	0/0:83,0:83:99:0,114,2123	0/0:21,1:21:10.30:0,10,562	0/0:25,0:25:44.36:0,44,652	0/0:44,0:44:75.20:0,75,1094	0/0:24,0:24:46.01:0,46,609	0/1:22,3:24:11.09:11,0,458	0/1:27,4:29:34.73:35,0,790	0/1:12,2:15:23.83:209,0,24
chr10	98416982	.	ACGT	A	1624.18	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.579;DP=614;FS=0.645;HRun=0;HaplotypeScore=86.7203;InbreedingCoeff=0.9762;MQ=92.31;MQ0=0;MQRankSum=-4.932;QD=34.56;ReadPosRankSum=1.208;VQSLOD=3.7095;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:54.18:936,54,0	0/0:12,0:12:36.12:0,36,850	0/0:28,0:28:52.89:0,53,1462	0/0:25,0:25:66.23:0,66,1320	0/0:20,0:20:60.19:0,60,1370	0/0:13,0:13:39.13:0,39,876	0/0:16,0:16:48.16:0,48,1134	0/0:24,0:24:62.95:0,63,1358	0/0:21,0:21:60.21:0,60,1385	0/0:27,0:27:75.17:0,75,1615	0/0:32,0:32:96.33:0,96,2100	0/0:15,0:15:42.14:0,42,988	0/0:23,0:23:69.24:0,69,1580	0/0:18,0:18:48.15:0,48,1087	0/0:20,0:20:57.20:0,57,1326	0/0:23,0:23:69.24:0,69,1604	0/0:29,0:29:84.29:0,84,1927	1/1:1,21:22:10.26:804,10,0	0/0:25,0:25:72.23:0,72,1655	0/0:25,0:25:75.13:0,75,1562	0/0:23,0:23:63.19:0,63,1395	0/0:16,0:16:48.12:0,48,1060	0/0:27,0:27:81.28:0,81,1879	0/0:14,0:14:42.08:0,42,912	0/0:22,0:22:63.21:0,63,1419	0/0:28,0:28:81.23:0,81,1846	0/0:26,0:26:78.25:0,78,1767	0/0:15,0:15:42.14:0,42,992
chr10	98417053	.	T	TTC	1222.82	PASS	AB=0.904;AC=31;AF=0.574;AN=54;BaseQRankSum=1.375;DP=592;FS=2.227;HRun=0;HaplotypeScore=105.0945;InbreedingCoeff=0.2491;MQ=59.50;MQ0=24;MQRankSum=0.914;QD=2.98;ReadPosRankSum=-0.441;VQSLOD=2.4081;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:25:18.94:174,19,0	1/1:14,0:14:5.98:46,6,0	./.	0/1:37,0:19:0:0,0,0	0/1:16,7:22:32.25:32,0,67	0/1:14,4:18:69.31:69,0,71	1/1:24,0:24:9.54:64,10,0	1/1:37,0:36:11.08:59,11,0	0/1:18,5:23:72.15:115,0,72	0/0:31,0:31:16.37:0,16,255	0/0:16,0:15:8.99:0,9,95	1/1:11,0:10:13:101,13,0	1/1:8,0:9:8.65:68,9,0	1/1:20,0:19:20.24:155,20,0	1/1:8,0:18:5.34:23,5,0	0/1:17,2:20:65.22:65,0,171	0/0:26,0:26:29.82:0,30,287	0/1:19,0:17:4.72:65,0,5	0/1:25,0:24:45.14:45,0,55	0/0:23,0:23:5.96:0,6,56	0/0:16,0:16:16.91:0,17,170	0/1:17,2:17:20.25:101,0,20	1/1:14,0:14:8.65:58,9,0	0/1:10,0:10:23.19:40,0,23	0/0:23,0:24:7.96:0,8,33	1/1:25,0:24:7.23:114,7,0	0/0:24,0:24:12.86:0,13,137	1/1:18,0:16:0.47:1,0,0
chr10	98418177	.	A	AT	5835.18	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-17.010;DP=677;FS=9.108;HRun=4;HaplotypeScore=63.5598;InbreedingCoeff=0.9997;MQ=88.12;MQ0=0;MQRankSum=-3.395;QD=37.65;ReadPosRankSum=1.422;VQSLOD=4.6597;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,42:46:99:1724,126,0	0/0:10,0:10:30.09:0,30,340	0/0:18,0:18:48.14:0,48,545	0/0:29,0:29:66.18:0,66,745	0/0:26,0:26:75.21:0,75,850	0/0:25,0:25:72.20:0,72,816	0/0:20,0:20:51.14:0,51,579	1/1:3,26:29:78.26:1067,78,0	0/0:18,0:18:54.15:0,54,613	0/0:28,0:28:81.22:0,81,912	0/0:18,0:18:45.12:0,45,510	0/0:23,0:23:66.19:0,66,749	0/0:30,0:30:84.21:0,84,932	0/0:20,0:20:57.16:0,57,646	0/0:17,0:17:51.15:0,51,579	1/1:2,11:13:33.11:452,33,0	0/0:32,0:32:90.26:0,90,1021	1/1:1,27:28:81.27:1108,81,0	0/0:21,0:21:57.15:0,57,640	0/0:23,0:23:63.18:0,63,714	0/0:33,0:33:93.27:0,93,1055	0/0:27,0:27:78.17:0,78,862	0/0:28,0:28:81.23:0,81,918	0/0:29,0:29:84.24:0,84,953	0/0:24,0:24:69.20:0,69,782	1/1:2,20:22:29.17:787,29,0	0/0:23,0:23:69.20:0,69,782	1/1:0,17:17:51.17:698,51,0
chr10	98418610	.	G	GT	983.16	PASS	AB=0.640;AC=7;AF=0.125;AN=56;BaseQRankSum=11.707;DP=633;FS=5.549;HRun=6;HaplotypeScore=75.9032;InbreedingCoeff=0.8387;MQ=73.56;MQ0=2;MQRankSum=-1.677;QD=7.62;ReadPosRankSum=-0.055;VQSLOD=0.2399;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:21,25:48:16.09:250,16,0	0/0:12,0:12:36.08:0,36,367	0/0:24,0:20:29.53:0,30,366	0/0:26,0:25:32.49:0,32,394	0/0:20,0:20:51.03:0,51,499	0/0:21,0:21:60.14:0,60,612	0/0:14,0:14:42.08:0,42,421	0/0:31,0:31:90.20:0,90,917	0/0:22,0:22:57.10:0,57,572	0/0:17,0:17:51.11:0,51,515	0/0:22,0:22:66.13:0,66,664	0/0:17,0:17:47.62:0,48,471	0/0:13,0:13:39.09:0,39,397	0/0:20,0:20:59.33:0,59,582	0/0:19,0:19:48.10:0,48,489	1/1:23,0:23:53.19:348,53,0	0/0:37,0:37:93.20:0,93,949	0/1:14,16:32:14.11:223,0,14	0/0:35,0:33:78.16:0,78,789	0/0:25,0:25:72.16:0,72,733	0/0:27,0:27:72.16:0,72,734	0/0:16,0:16:45.01:0,45,442	0/0:18,0:18:54.07:0,54,538	0/0:15,0:15:40.54:0,41,424	0/0:22,0:22:51.06:0,51,509	1/1:26,0:26:35.85:310,36,0	0/0:18,0:18:51.09:0,51,512	0/0:13,0:13:33.07:0,33,336
chr10	98418619	.	T	TG	1505.44	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.320;DP=647;FS=0.511;HRun=0;HaplotypeScore=74.8129;InbreedingCoeff=0.9990;MQ=71.17;MQ0=2;MQRankSum=-0.416;QD=29.52;ReadPosRankSum=2.788;VQSLOD=3.6049;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:33.59:0,34,397	0/0:14,0:14:39.11:0,39,513	0/0:22,0:18:50.31:0,50,551	0/0:28,0:27:62.90:0,63,755	0/0:20,0:20:52.98:0,53,720	0/0:22,0:22:63.12:0,63,836	0/0:14,0:14:42.10:0,42,523	0/0:40,0:40:99:0,120,1540	0/0:23,0:23:69.21:0,69,916	0/0:18,0:18:54.18:0,54,747	0/0:21,0:21:63.19:0,63,847	0/0:17,0:17:51.11:0,51,673	0/0:15,0:15:45.13:0,45,595	0/0:20,0:20:57.18:0,57,780	0/0:23,0:23:66.15:0,66,792	1/1:0,26:26:51.17:725,51,0	0/0:36,0:36:99:0,108,1419	0/0:32,0:32:26.84:0,27,347	0/0:28,0:26:75.12:0,75,915	0/0:26,0:26:78.15:0,78,989	0/0:25,0:25:75.24:0,75,1028	0/0:16,0:16:48.14:0,48,624	0/0:23,0:23:69.16:0,69,884	0/0:17,0:17:43.98:0,44,629	0/0:23,0:23:59.74:0,60,832	1/1:2,23:25:33.12:902,33,0	0/0:17,0:17:51.15:0,51,679	0/0:11,0:11:33.08:0,33,426
chr10	98420988	.	A	ATT	1845.57	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.641;DP=661;FS=2.754;HRun=7;HaplotypeScore=75.6777;InbreedingCoeff=0.9946;MQ=61.64;MQ0=3;MQRankSum=0.070;QD=34.82;ReadPosRankSum=-0.882;VQSLOD=3.4987;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,105,1204	0/0:6,0:6:18.04:0,18,199	0/0:18,0:13:27.06:0,27,319	0/0:21,0:20:42.34:0,42,500	0/0:37,0:37:99:0,108,1258	0/0:24,0:24:72.21:0,72,839	0/0:19,0:19:51.14:0,51,594	0/0:24,0:25:65.93:0,66,746	0/0:18,0:18:48.14:0,48,559	0/0:32,0:32:87.21:0,87,995	0/0:31,0:31:84.25:0,84,979	0/0:18,0:19:44.86:0,45,585	0/0:24,0:24:66.19:0,66,769	0/0:11,0:11:33.10:0,33,385	0/0:23,0:23:63.18:0,63,734	1/1:0,13:13:33.11:542,33,0	0/0:34,0:34:96.26:0,96,1107	0/0:15,0:15:36.10:0,36,417	0/0:24,0:24:63.15:0,63,713	0/0:36,0:36:93.23:0,93,1071	0/0:13,0:13:36.09:0,36,408	0/0:31,0:31:90.27:0,90,1046	0/0:22,0:22:63.17:0,63,721	0/0:17,0:17:45.12:0,45,524	0/0:20,0:20:57.16:0,57,664	1/1:9,31:40:29.40:1425,29,0	0/0:31,0:31:93.28:0,93,1084	0/0:16,0:16:48.14:0,48,559
chr10	98421551	.	AT	A	112.74	PASS	AB=0.571;AC=1;AF=0.018;AN=56;BaseQRankSum=3.642;DP=211;FS=13.256;HRun=3;HaplotypeScore=28.6228;InbreedingCoeff=-0.0557;MQ=60.74;MQ0=3;MQRankSum=0.440;QD=14.09;ReadPosRankSum=-0.309;VQSLOD=1.0588;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:9.03:0,9,124	0/0:4,0:4:10.46:0,10,98	0/0:3,0:1:3.01:0,3,41	0/0:4,0:4:6.01:0,6,71	0/0:6,0:6:18.06:0,18,248	0/0:7,0:7:13.10:0,13,135	0/0:2,0:2:3.01:0,3,41	0/0:34,0:32:86.62:0,87,1167	0/0:4,0:4:10.09:0,10,94	0/0:8,0:7:18.06:0,18,250	0/0:5,0:5:15.05:0,15,211	0/0:6,0:6:14.08:0,14,170	0/0:6,0:6:14.07:0,14,156	0/0:2,0:2:6.02:0,6,83	0/0:8,0:8:19.12:0,19,219	0/0:6,0:6:7.08:0,7,53	0/0:14,0:14:36.58:0,37,439	0/0:10,0:9:27.08:0,27,356	0/0:7,0:7:21.07:0,21,290	0/0:9,0:9:24.08:0,24,334	0/0:3,0:3:9.02:0,9,109	0/0:3,0:3:9.03:0,9,124	0/0:7,0:7:18.06:0,18,246	0/0:1,0:1:3.01:0,3,41	0/0:5,0:5:15.05:0,15,204	0/1:2,6:8:19.19:187,0,19	0/0:14,0:14:42.12:0,42,552	0/0:21,0:21:51.81:0,52,644
chr10	98421552	.	TTTATTATTATTATTATTA	T	915.59	PASS	AB=0.727;AC=11;AF=0.262;AN=42;BaseQRankSum=4.712;DP=213;FS=3.085;HRun=0;HaplotypeScore=96.1560;InbreedingCoeff=0.4488;MQ=60.48;MQ0=4;MQRankSum=-4.176;QD=24.75;ReadPosRankSum=0.528;VQSLOD=2.2139;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:4:6.02:0,6,91	0/0:2,0:4:6.02:0,6,351	./.	./.	0/0:6,0:6:6.02:0,6,399	1/1:3,4:7:6.02:289,6,0	./.	0/0:34,0:31:30.99:0,31,621	1/1:2,1:4:6.02:215,6,0	0/0:8,0:7:3.01:0,3,253	0/0:5,0:5:6.02:0,6,506	1/1:4,0:6:3.01:66,3,0	1/1:4,0:6:3.01:66,3,0	./.	0/1:5,0:8:64.51:119,0,65	1/1:1,5:6:5.85:289,6,0	0/0:14,0:15:18.53:0,19,1269	./.	./.	0/0:9,0:9:6.02:0,6,478	0/0:3,0:3:3.01:0,3,253	./.	0/0:7,0:7:5.99:0,6,49	0/0:1,0:1:3.01:0,3,38	0/0:5,0:5:9.03:0,9,373	0/0:8,0:8:6.91:0,7,398	0/0:15,0:15:21.07:0,21,1124	0/0:15,0:21:27.09:0,27,1339
chr10	98422324	.	AT	A	942.89	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.772;DP=633;FS=5.725;HRun=2;HaplotypeScore=61.0469;InbreedingCoeff=0.9497;MQ=56.78;MQ0=5;MQRankSum=0.876;QD=32.51;ReadPosRankSum=-2.397;VQSLOD=2.4699;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:48.59:0,49,743	0/0:13,0:13:39.13:0,39,584	0/0:19,0:8:9.68:0,10,255	0/0:17,0:13:33:0,33,424	0/0:26,0:26:66.12:0,66,923	0/0:23,0:22:66.21:0,66,951	0/0:22,0:22:63.21:0,63,936	0/0:31,0:31:90.26:0,90,1288	0/0:19,0:19:54.16:0,54,771	0/0:29,0:29:87.29:0,87,1287	0/0:23,0:23:66.22:0,66,986	0/0:24,0:24:69.20:0,69,973	0/0:24,0:24:72.24:0,72,1061	0/0:15,0:15:45.14:0,45,653	0/0:21,0:21:63.21:0,63,944	0/0:20,0:20:60.19:0,60,864	0/0:29,0:29:87.25:0,87,1258	0/0:22,0:22:63.21:0,63,931	0/0:21,0:17:51.17:0,51,755	0/0:33,0:33:96.31:0,96,1415	0/0:26,0:26:78.23:0,78,1128	0/0:18,0:18:54.16:0,54,769	0/0:25,0:25:63.13:0,63,849	0/0:22,0:22:63.20:0,63,922	0/0:25,0:25:69.23:0,69,1031	1/1:1,28:29:84.20:1038,84,0	0/0:30,0:30:90.30:0,90,1340	0/0:8,0:8:24.08:0,24,358
chr10	98422564	.	ATTTTC	A	1142.44	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.490;DP=634;FS=6.144;HRun=0;HaplotypeScore=116.2902;InbreedingCoeff=0.9992;MQ=62.49;MQ0=0;MQRankSum=-0.357;QD=54.40;ReadPosRankSum=2.733;VQSLOD=4.0513;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.29:0,84,2043	0/0:11,0:11:30.10:0,30,905	0/0:22,0:21:57.20:0,57,1629	0/0:20,0:18:51.15:0,51,1454	0/0:35,0:35:99:0,102,3226	0/0:28,0:28:84.29:0,84,2638	0/0:24,0:24:72.25:0,72,2218	0/0:31,0:31:84.29:0,84,2603	0/0:20,0:20:60.20:0,60,1811	0/0:25,0:25:75.26:0,75,2365	0/0:26,0:26:75.26:0,75,2269	0/0:18,0:18:54.19:0,54,1713	0/0:16,0:16:45.15:0,45,1423	0/0:21,0:21:63.22:0,63,1987	0/0:26,0:26:78.27:0,78,2390	1/1:0,21:21:57.20:1237,57,0	0/0:38,0:38:99:0,111,3520	0/0:23,0:23:66.23:0,66,1596	0/0:14,0:14:39.13:0,39,1238	0/0:32,0:32:90.28:0,90,2616	0/0:12,0:12:36.12:0,36,1138	0/0:26,0:26:75.26:0,75,2369	0/0:25,0:25:75.24:0,75,2260	0/0:15,0:15:42.14:0,42,1329	0/0:15,0:15:45.15:0,45,1418	0/0:21,0:21:54.19:0,54,1679	0/0:26,0:26:75.26:0,75,2345	0/0:14,0:14:42.13:0,42,1244
chr10	98423217	.	G	GT	812.95	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=5.109;DP=581;FS=11.008;HRun=7;HaplotypeScore=66.3630;InbreedingCoeff=0.6260;MQ=68.54;MQ0=5;MQRankSum=-0.421;QD=13.55;ReadPosRankSum=-1.101;VQSLOD=1.8366;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.21:0,87,930	0/0:5,0:5:12.03:0,12,129	0/1:31,0:20:42.54:43,0,183	0/0:24,0:18:15.91:0,16,332	0/0:29,0:29:81.15:0,81,852	0/0:17,0:17:41.96:0,42,413	0/0:13,0:13:33.08:0,33,353	0/0:31,0:31:74.91:0,75,804	0/0:21,0:21:57.12:0,57,603	0/0:31,0:31:84.20:0,84,895	0/0:26,0:26:66.10:0,66,692	0/0:15,0:15:42.02:0,42,426	0/0:17,0:17:45.11:0,45,482	0/0:15,0:15:39.09:0,39,418	0/0:19,0:19:51.13:0,51,547	0/0:19,0:19:35.91:0,36,313	0/0:14,0:14:42.10:0,42,448	0/0:14,0:14:42.08:0,42,439	0/0:29,0:28:72.09:0,72,758	0/0:27,0:27:72.18:0,72,771	0/0:20,0:20:54.12:0,54,572	0/0:11,0:11:26.85:0,27,269	0/0:31,0:31:90.09:0,90,934	0/0:11,0:11:27.07:0,27,290	0/0:18,0:18:48.12:0,48,512	1/1:5,23:28:71.91:877,72,0	0/0:23,0:23:63.14:0,63,669	0/0:8,0:8:24.06:0,24,255
chr10	98424160	.	TGGTTGTGTGTGTGTGTGTG	T	631.19	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=7.341;DP=515;FS=0.000;HRun=0;HaplotypeScore=220.4513;InbreedingCoeff=0.4329;MQ=58.58;MQ0=33;MQRankSum=-1.152;QD=8.77;ReadPosRankSum=-0.333;VQSLOD=2.4017;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:34.01:34,0,688	0/0:5,0:5:12.04:0,12,561	0/0:16,0:3:9.03:0,9,134	0/0:26,0:9:18.04:0,18,334	0/0:9,0:9:24.08:0,24,687	0/0:15,0:15:45.15:0,45,1773	0/0:16,0:16:42.14:0,42,1135	0/0:20,0:19:54.15:0,54,957	0/0:16,0:16:42.08:0,42,1166	0/0:26,0:26:78.14:0,78,2558	0/0:12,0:11:33.11:0,33,1091	0/0:17,0:17:33.11:0,33,1090	0/0:25,0:24:59.67:0,60,1449	0/0:15,0:15:36.09:0,36,1232	0/0:15,0:16:28.04:0,28,855	0/1:23,0:23:91.61:92,0,463	0/0:26,0:26:75.26:0,75,3436	0/0:8,0:8:23.22:0,23,367	0/0:14,0:12:33.08:0,33,632	0/0:13,0:13:33.10:0,33,1209	0/0:43,0:42:99:0,109,2943	0/0:19,0:19:48.15:0,48,1022	0/0:12,0:12:24:0,24,532	0/0:30,0:28:60.21:0,60,2653	0/0:15,0:15:36.06:0,36,1021	1/1:3,14:15:36.05:621,36,0	0/0:21,0:21:60.21:0,60,2655	0/0:8,0:8:24.08:0,24,974
chr10	98424163	.	TTG	T	703.59	PASS	AB=0.926;AC=30;AF=0.625;AN=48;BaseQRankSum=5.800;DP=529;FS=1.603;HRun=0;HaplotypeScore=80.5513;InbreedingCoeff=0.2772;MQ=55.74;MQ0=36;MQRankSum=-1.168;QD=2.04;ReadPosRankSum=1.389;VQSLOD=1.7869;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:31:2.80:13,3,0	0/0:4,0:5:6.02:0,6,89	./.	./.	0/0:14,0:14:8.97:0,9,88	1/1:14,0:16:21.68:123,22,0	0/1:14,0:17:9.63:15,0,10	./.	1/1:9,0:15:5.68:28,6,0	0/1:24,0:24:24.31:24,0,195	0/1:13,0:13:4.62:9,0,5	1/1:11,0:17:8.52:42,9,0	0/1:17,0:23:15.97:16,0,30	1/1:11,0:14:8.97:39,9,0	1/1:10,0:16:2.73:14,3,0	1/1:9,0:23:17.51:84,18,0	0/1:27,0:27:2.27:2,0,319	./.	0/0:14,0:11:2.92:0,3,17	0/1:15,0:15:16.02:16,0,159	0/0:46,0:45:24.01:0,24,340	1/1:15,0:22:2.80:13,3,0	1/1:6,4:10:3.01:32,3,0	1/1:17,16:32:29.74:286,30,0	0/0:13,3:16:2.56:0,3,44	1/1:17,0:15:2.84:14,3,0	0/0:22,0:22:23.87:0,24,264	1/1:6,2:8:9:88,9,0
chr10	98424670	.	TCA	T	230.19	PASS	AB=0.929;AC=17;AF=0.340;AN=50;BaseQRankSum=4.471;DP=396;FS=2.142;HRun=0;HaplotypeScore=106.0560;InbreedingCoeff=0.3831;MQ=58.00;MQ0=10;MQRankSum=-2.108;QD=1.89;ReadPosRankSum=2.218;VQSLOD=2.1723;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:5,0:5:3.01:0,3,43	./.	./.	0/0:11,0:9:3.01:0,3,44	0/0:21,2:23:0.64:0,1,382	0/0:17,0:17:12.04:0,12,178	1/1:26,0:27:0.47:1,0,0	0/1:10,2:12:17.37:17,0,152	0/0:8,0:8:3:0,3,27	0/0:10,0:10:12.02:0,12,150	1/1:4,2:6:9.02:93,9,0	0/0:8,0:8:12.04:0,12,178	1/1:5,3:9:11.86:111,12,0	0/0:17,0:17:21.07:0,21,311	1/1:17,0:17:14.20:70,14,0	0/0:28,0:29:27.08:0,27,375	1/1:13,0:14:2.84:14,3,0	0/1:12,1:13:26.38:26,0,36	0/0:7,0:7:3.01:0,3,44	0/0:15,0:14:9.03:0,9,133	1/1:7,0:8:2.84:14,3,0	0/0:8,0:8:6.02:0,6,89	0/0:19,0:20:18.03:0,18,228	0/1:10,0:10:20.37:20,0,103	0/0:12,0:12:17.91:0,18,159	0/0:12,0:12:9.03:0,9,131	1/1:3,0:5:2.84:14,3,0
chr10	98424671	.	C	CAT	700.50	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=2.315;DP=421;FS=7.431;HRun=0;HaplotypeScore=120.8980;InbreedingCoeff=0.8950;MQ=57.76;MQ0=11;MQRankSum=-1.936;QD=11.87;ReadPosRankSum=1.323;VQSLOD=2.5967;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:12:12.85:96,13,0	0/0:6,0:6:11.98:0,12,113	0/0:28,0:18:50.23:0,50,418	0/0:28,0:13:26.13:0,26,282	0/0:15,0:13:14.92:0,15,136	0/0:22,0:22:57:0,57,631	0/0:18,0:18:39:0,39,405	0/0:28,0:27:65.21:0,65,558	0/0:13,0:13:29.97:0,30,286	0/0:11,0:11:20.92:0,21,175	0/0:10,0:10:17.98:0,18,167	0/0:8,0:8:14.99:0,15,128	0/0:10,0:10:20.89:0,21,255	0/0:8,0:8:20.97:0,21,174	0/0:18,0:18:51:0,51,560	1/1:18,0:18:17.39:179,17,0	0/0:32,0:32:46.60:0,47,654	1/1:15,0:15:17.78:217,18,0	0/0:16,0:15:29.20:0,29,230	0/0:6,0:6:17.99:0,18,168	0/0:16,0:15:32.94:0,33,321	0/0:9,0:9:17.96:0,18,144	0/0:12,0:12:17.99:0,18,186	0/0:21,0:21:24.36:0,24,387	0/0:9,0:9:1.73:0,2,172	1/1:0,12:13:32.97:363,33,0	0/0:13,0:13:32.46:0,32,279	0/0:5,0:5:11.96:0,12,94
chr10	98424705	.	CACACACACACAT	C	468.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.940;DP=464;FS=1.359;HRun=0;HaplotypeScore=153.1673;InbreedingCoeff=0.9328;MQ=55.81;MQ0=11;MQRankSum=-2.664;QD=31.26;ReadPosRankSum=-1.390;VQSLOD=3.2056;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:20.83:0,21,255	0/0:7,0:7:14.79:0,15,473	0/0:20,0:8:17.15:0,17,193	0/0:23,0:8:21.01:0,21,196	0/0:17,0:15:27.06:0,27,1095	0/0:27,0:27:75.17:0,75,2850	0/0:22,0:20:44.97:0,45,1325	0/0:21,0:20:46.30:0,46,541	0/0:19,0:19:53.98:0,54,1606	0/0:18,0:18:54.02:0,54,1594	0/0:12,0:10:27.05:0,27,1061	0/0:10,0:10:20.92:0,21,459	0/0:14,0:14:35.98:0,36,1406	0/0:13,0:13:39.08:0,39,1206	0/0:19,0:19:33.68:0,34,2097	1/1:1,14:15:14.55:557,15,0	0/0:25,0:25:63.72:0,64,2855	0/0:17,0:17:50.55:0,51,707	0/0:10,0:10:30.06:0,30,813	0/0:16,0:16:40.90:0,41,987	0/0:17,0:16:42.03:0,42,1546	0/0:13,0:12:20.25:0,20,707	0/0:17,0:17:38.51:0,39,1511	0/0:21,0:21:54.10:0,54,2052	0/0:13,0:13:36.06:0,36,1183	0/0:17,0:17:51.07:0,51,1663	0/0:12,0:12:36.10:0,36,1441	0/0:9,0:9:20.54:0,21,151
chr10	98425002	.	AGT	A	65.55	PASS	AB=0.992;AC=12;AF=0.261;AN=46;BaseQRankSum=-0.121;DP=463;FS=17.004;HRun=0;HaplotypeScore=68.0511;InbreedingCoeff=0.1319;MQ=55.65;MQ0=13;MQRankSum=0.891;QD=0.49;ReadPosRankSum=1.223;VQSLOD=0.2357;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:2.22:7,2,0	./.	./.	./.	0/1:17,0:15:0.91:1,0,59	0/0:26,0:26:12.27:0,12,94	0/0:20,0:20:5.99:0,6,50	./.	0/0:12,0:12:8.99:0,9,76	0/1:11,0:11:7.72:26,0,8	1/1:11,0:11:3:29,3,0	0/0:13,0:13:9.08:0,9,77	0/0:7,0:10:3:0,3,26	0/0:11,0:10:5.99:0,6,63	0/0:18,0:17:5.72:0,6,62	0/0:8,0:8:0:0,0,0	0/0:20,0:18:29.98:0,30,343	0/0:16,0:16:10.90:0,11,63	0/1:18,0:18:0.32:0,0,38	0/1:10,0:10:17.88:26,0,18	0/0:25,0:24:7.44:0,7,216	0/0:11,0:10:3.01:0,3,43	0/0:15,0:15:3.99:0,4,15	0/0:13,0:13:11.32:0,11,98	1/1:5,3:8:6.02:63,6,0	0/1:21,0:21:14.51:15,0,28	0/1:19,1:19:19.68:20,0,116	./.
chr10	98425848	.	TACACAC	T	144	PASS	AB=0.643;AC=2;AF=0.036;AN=56;BaseQRankSum=5.749;DP=753;FS=3.486;HRun=0;HaplotypeScore=165.6473;InbreedingCoeff=0.0255;MQ=60.86;MQ0=7;MQRankSum=-6.126;QD=2.25;ReadPosRankSum=-2.199;VQSLOD=2.3148;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,29:45:37.42:57,0,37	0/0:4,0:5:9.03:0,9,237	0/0:27,0:17:12:0,12,116	0/0:31,0:20:17.98:0,18,178	0/0:23,0:23:36.12:0,36,1069	0/0:19,0:19:39.12:0,39,1032	0/0:34,0:34:55.60:0,56,1849	0/0:16,0:41:21.11:0,21,198	0/0:22,0:23:48.11:0,48,1294	0/0:29,0:29:60.15:0,60,1623	0/0:15,0:17:24.01:0,24,501	0/0:19,0:20:54.05:0,54,1484	0/0:22,0:25:57.18:0,57,1446	0/0:21,0:24:63.12:0,63,1478	0/0:32,0:32:66.23:0,66,1787	0/0:27,0:28:60.21:0,60,1822	0/0:18,0:20:33.03:0,33,850	0/1:10,9:19:51.56:175,0,52	0/0:17,0:16:21.05:0,21,503	0/0:20,0:23:54.13:0,54,1414	0/0:44,0:50:99:0,114,3037	0/0:31,0:32:72.23:0,72,2084	0/0:22,0:23:51.15:0,51,1541	0/0:46,0:49:99:0,105,3143	0/0:18,0:21:36.12:0,36,932	0/0:14,0:33:51.67:0,52,777	0/0:26,0:27:44.75:0,45,1916	0/0:8,0:15:1.80:0,2,7
chr10	98426680	.	C	CACACACACACACAT	7478.47	PASS	AB=0.911;AC=7;AF=0.125;AN=56;BaseQRankSum=4.104;DP=677;FS=20.899;HRun=0;HaplotypeScore=249.2275;InbreedingCoeff=0.1835;MQ=59.49;MQ0=9;MQRankSum=-10.173;QD=48.88;ReadPosRankSum=-2.252;VQSLOD=2.9698;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:24:43.06:508,0,43	0/0:5,0:5:15.05:0,15,506	0/0:36,0:18:33.09:0,33,726	0/0:29,0:14:11.04:0,11,300	0/0:33,0:33:87.25:0,87,3013	0/0:27,0:27:72.19:0,72,2500	0/0:25,0:25:51.56:0,52,1367	0/1:32,0:31:99:662,0,162	0/0:14,0:14:39.12:0,39,1358	0/0:26,0:26:63.17:0,63,1777	0/0:33,0:33:63.15:0,63,1968	0/0:20,0:20:57.14:0,57,1987	0/0:25,0:25:61.35:0,61,2154	0/0:20,0:20:42.06:0,42,1113	0/0:23,0:23:66.13:0,66,2090	1/1:30,0:30:24.45:1666,24,0	0/0:25,0:25:66.17:0,66,2245	0/1:13,0:13:72.83:367,0,73	0/0:13,0:13:18.04:0,18,477	0/0:28,0:28:81.19:0,81,2517	0/0:27,0:27:66.03:0,66,1916	0/0:17,0:17:48.15:0,48,1811	0/0:25,0:25:54.13:0,54,1726	0/0:17,0:17:39.09:0,39,1285	0/0:14,0:14:30.08:0,30,988	0/1:8,20:39:66.78:3542,0,67	0/0:42,0:42:99:0,117,4147	0/1:13,0:13:14.80:733,0,15
chr10	98427524	.	CTG	C	1530.42	PASS	AB=1.000;AC=32;AF=0.667;AN=48;BaseQRankSum=3.132;DP=530;FS=17.312;HRun=0;HaplotypeScore=72.1337;InbreedingCoeff=0.0307;MQ=62.10;MQ0=29;MQRankSum=1.708;QD=4.26;ReadPosRankSum=3.392;VQSLOD=0.8380;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:20.84:154,21,0	0/0:8,0:7:3:0,3,25	./.	./.	0/0:7,0:7:2.99:0,3,24	./.	1/1:29,0:28:20.75:167,21,0	1/1:19,0:19:2.96:19,3,0	1/1:19,0:19:14.83:104,15,0	0/1:23,0:21:19.40:19,0,85	0/1:9,0:9:14.53:15,0,54	1/1:14,0:14:14.90:109,15,0	1/1:15,0:15:22.57:149,23,0	1/1:10,0:10:14.89:123,15,0	0/1:21,0:21:13:168,0,13	1/1:8,0:11:11.02:79,11,0	0/1:29,0:27:27.79:28,0,212	1/1:7,0:8:5.71:29,6,0	0/0:25,0:23:5.88:0,6,42	0/1:17,0:16:19.45:19,0,88	0/0:51,0:49:4.35:0,4,269	./.	1/1:4,0:4:2.99:24,3,0	1/1:42,0:41:11.35:387,11,0	0/1:6,0:6:16.67:17,0,19	0/1:24,0:24:28.91:29,0,97	0/1:18,0:17:24.35:24,0,102	1/1:5,5:10:2.90:16,3,0
chr10	98427614	.	A	AG	2369.80	PASS	AB=0.538;AC=11;AF=0.196;AN=56;BaseQRankSum=-5.170;DP=505;FS=19.888;HRun=2;HaplotypeScore=64.6572;InbreedingCoeff=0.8905;MQ=60.39;MQ0=9;MQRankSum=-0.037;QD=27.88;ReadPosRankSum=-0.475;VQSLOD=1.8941;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:21:35.59:492,36,0	0/0:2,0:2:6.02:0,6,74	0/0:51,0:22:37.17:0,37,477	0/0:56,0:24:42.39:0,42,535	0/0:6,0:6:18.06:0,18,223	0/0:16,0:16:45.14:0,45,554	0/0:25,0:25:66.20:0,66,807	1/1:3,14:17:42.14:596,42,0	0/0:15,0:15:33.09:0,33,396	0/0:21,0:20:57.18:0,57,706	0/0:6,0:6:18.06:0,18,222	0/0:13,0:13:39.08:0,39,454	0/0:17,0:17:45.14:0,45,557	0/0:8,0:8:21.07:0,21,260	0/0:11,0:11:24.06:0,24,285	0/1:2,12:13:0.43:437,0,0	0/0:31,0:31:84.25:0,84,1038	1/1:1,4:5:9.03:128,9,0	0/0:22,0:22:60.19:0,60,740	0/0:10,0:10:30.09:0,30,371	0/0:34,0:34:90.27:0,90,1101	0/0:9,0:9:24.02:0,24,297	0/0:7,0:7:21.05:0,21,245	0/0:39,0:37:99:0,105,1300	0/0:12,0:12:36.11:0,36,444	1/1:2,15:17:10.96:586,11,0	0/0:6,0:6:15.05:0,15,183	1/1:2,9:10:21.07:302,21,0
chr10	98427768	.	CT	C	478.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.233;DP=422;FS=5.825;HRun=8;HaplotypeScore=43.8728;InbreedingCoeff=0.7294;MQ=65.65;MQ0=6;MQRankSum=2.375;QD=19.94;ReadPosRankSum=-0.466;VQSLOD=2.9456;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.20:0,69,819	0/0:9,0:9:21.06:0,21,254	0/0:18,0:8:10.50:0,10,120	0/0:18,0:15:28.82:0,29,292	0/0:14,0:14:39.12:0,39,470	0/0:16,0:16:42.10:0,42,489	0/0:14,0:13:30.08:0,30,351	0/0:29,0:26:63.18:0,63,750	0/0:3,0:3:6.02:0,6,72	0/0:14,0:14:36.10:0,36,425	0/0:15,0:15:45.12:0,45,519	0/0:9,0:9:21.06:0,21,253	0/0:15,0:15:39.12:0,39,471	0/0:7,0:7:21.06:0,21,254	0/0:9,0:9:27.08:0,27,322	0/0:3,0:13:31.99:0,32,184	0/0:29,0:29:75.23:0,75,905	0/0:14,0:14:36.11:0,36,434	0/0:20,0:20:57.15:0,57,673	0/0:12,0:12:33.09:0,33,389	0/0:10,0:10:27.07:0,27,314	0/0:2,0:2:3.01:0,3,36	0/0:6,0:6:15.05:0,15,181	0/0:8,0:8:18.06:0,18,217	0/0:21,0:21:63.19:0,63,760	1/1:3,21:24:30.89:573,31,0	0/0:33,0:33:85.50:0,86,1017	0/0:13,0:13:39.12:0,39,468
chr10	98427959	.	C	CT	2484.16	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.136;DP=557;FS=0.976;HRun=7;HaplotypeScore=58.3228;InbreedingCoeff=0.9874;MQ=61.02;MQ0=12;MQRankSum=1.419;QD=28.23;ReadPosRankSum=1.616;VQSLOD=4.3617;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,35:38:87.20:1033,87,0	0/0:6,0:6:18.02:0,18,169	0/0:19,0:8:18.65:0,19,153	0/0:18,0:6:14.15:0,14,99	0/0:17,0:17:45.06:0,45,434	0/0:17,0:17:48.05:0,48,455	0/0:26,0:26:66.09:0,66,633	0/0:26,0:20:50.08:0,50,457	0/0:16,0:16:45.05:0,45,423	0/0:20,0:20:54.08:0,54,521	0/0:14,0:14:36.03:0,36,341	0/0:12,0:12:36.05:0,36,343	0/0:16,0:15:39.01:0,39,367	0/0:23,0:23:54.05:0,54,508	0/0:23,0:23:69.11:0,69,666	0/0:18,0:18:48.06:0,48,455	0/0:32,0:32:81.06:0,81,758	1/1:1,21:22:57.17:689,57,0	0/0:21,0:18:48.08:0,48,463	0/0:15,0:15:39.01:0,39,367	0/0:12,0:12:36.06:0,36,347	0/0:13,0:13:36.04:0,36,339	0/0:10,0:10:30.02:0,30,278	0/0:22,0:22:60.10:0,60,579	0/0:22,0:22:60:0,60,560	1/1:3,25:28:75.23:906,75,0	0/0:25,0:25:60.08:0,60,575	0/0:25,0:25:63.08:0,63,601
chr10	98428072	.	G	GT	812.56	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.361;DP=681;FS=0.787;HRun=5;HaplotypeScore=65.8919;InbreedingCoeff=0.9916;MQ=89.21;MQ0=0;MQRankSum=-0.646;QD=32.50;ReadPosRankSum=-1.389;VQSLOD=3.6823;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,159,1688	0/0:12,0:12:33.08:0,33,355	0/0:28,0:28:60.06:0,60,616	0/0:24,0:24:43.29:0,43,531	0/0:22,0:22:54.12:0,54,572	0/0:18,0:18:48.08:0,48,499	0/0:37,0:37:99:0,108,1150	0/0:27,0:27:69.16:0,69,734	0/0:21,0:21:54.10:0,54,560	0/0:24,0:24:66.16:0,66,709	0/0:23,0:23:63.15:0,63,673	0/0:13,0:13:39.10:0,39,419	0/0:29,0:29:78.19:0,78,837	0/0:24,0:24:66.16:0,66,709	0/0:23,0:23:66.14:0,66,693	0/0:28,0:27:78.20:0,78,838	0/0:45,0:45:99:0,126,1353	0/0:26,0:26:72.18:0,72,773	0/0:16,0:16:39.10:0,39,418	0/0:22,0:22:60.13:0,60,635	0/0:24,0:24:63.16:0,63,677	0/0:19,0:19:51.11:0,51,539	0/0:16,0:16:42.11:0,42,451	0/0:39,0:39:99:0,108,1160	0/0:17,0:17:45.11:0,45,484	1/1:1,24:25:69.22:907,69,0	0/0:16,0:16:42.10:0,42,451	0/0:6,0:6:18.05:0,18,193
chr10	98430041	.	G	GATTTATTC	4741.58	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=2.521;DP=640;FS=1.910;HRun=0;HaplotypeScore=153.5293;InbreedingCoeff=0.9393;MQ=63.96;MQ0=0;MQRankSum=-6.799;QD=30.01;ReadPosRankSum=-1.364;VQSLOD=4.4967;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,19:30:41.97:1420,42,0	0/0:11,0:11:32.96:0,33,559	0/1:16,0:13:1.49:1,0,390	0/0:16,0:14:38.59:0,39,544	0/0:14,0:14:36:0,36,709	0/0:22,0:22:45.09:0,45,1017	0/0:28,0:28:84.08:0,84,1516	1/1:27,0:24:68.91:985,69,0	0/0:21,0:21:50.94:0,51,1066	0/0:27,0:27:78.24:0,78,1876	0/0:12,0:12:36.06:0,36,726	0/0:39,0:39:99:0,99,2284	0/0:26,0:26:72.08:0,72,1587	0/0:26,0:26:68.91:0,69,1377	0/0:26,0:26:56.99:0,57,1241	1/1:1,0:21:38.68:453,39,0	0/0:29,0:29:84.09:0,84,1689	1/1:0,22:24:24.08:952,24,0	0/0:17,0:16:41.91:0,42,647	0/0:19,0:19:42.10:0,42,972	0/0:32,0:33:90.18:0,90,2028	0/0:14,0:14:35.91:0,36,626	0/0:15,0:15:32.81:0,33,604	0/0:39,0:39:99:0,114,2244	0/0:24,0:24:66.17:0,66,1569	1/1:1,0:24:66.13:692,66,0	0/0:23,0:23:63:0,63,1430	1/1:12,0:12:29.90:237,30,0
chr10	98430254	.	A	AT	580.14	PASS	AB=0.958;AC=4;AF=0.071;AN=56;BaseQRankSum=-4.599;DP=482;FS=6.984;HRun=9;HaplotypeScore=52.2195;InbreedingCoeff=0.5220;MQ=71.52;MQ0=1;MQRankSum=0.366;QD=13.18;ReadPosRankSum=-1.475;VQSLOD=2.5602;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:89.95:0,90,775	0/0:16,0:16:41.98:0,42,365	0/0:9,1:9:14.54:0,15,108	0/1:11,0:10:2.88:3,0,89	0/0:19,0:19:47.95:0,48,409	0/0:16,0:15:44.99:0,45,391	0/0:11,0:11:26.99:0,27,234	0/0:34,0:34:86.95:0,87,749	0/1:10,1:11:3.19:3,0,204	0/0:15,0:16:41.03:0,41,345	0/0:13,0:13:32.99:0,33,286	0/0:13,0:13:35.97:0,36,309	0/0:13,1:14:8.81:0,9,305	0/0:17,1:18:8.80:0,9,305	0/0:13,0:13:32.99:0,33,286	0/0:1,0:12:20.37:0,20,60	0/0:25,0:25:65.95:0,66,567	0/0:16,0:16:44.99:0,45,391	0/0:17,0:17:44.99:0,45,391	0/0:18,0:18:50.99:0,51,442	0/0:14,0:14:26.94:0,27,231	0/0:17,0:17:50.99:0,51,442	0/0:18,0:19:50.02:0,50,423	0/0:12,0:12:32.99:0,33,286	0/0:16,0:16:38.96:0,39,332	1/1:0,22:22:63.13:674,63,0	0/0:24,0:24:53.98:0,54,468	0/0:22,0:22:56.96:0,57,495
chr10	98431026	.	TA	T	1214.42	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.142;DP=591;FS=5.489;HRun=11;HaplotypeScore=69.9609;InbreedingCoeff=0.9589;MQ=76.79;MQ0=0;MQRankSum=0.841;QD=10.75;ReadPosRankSum=-0.089;VQSLOD=2.9834;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,36:44:91.25:727,91,0	0/0:5,0:5:12.03:0,12,128	0/0:12,0:13:22.96:0,23,201	0/0:18,0:16:18.10:0,18,169	0/0:17,0:19:41.89:0,42,411	0/0:12,0:12:21.04:0,21,218	0/0:22,0:23:62.99:0,63,654	1/1:4,0:29:45.69:131,46,0	0/0:17,0:17:36.09:0,36,384	0/0:9,0:9:15.04:0,15,160	0/0:16,1:17:14.45:0,14,358	0/0:22,0:22:48.11:0,48,504	0/0:18,0:18:48.08:0,48,489	0/0:22,2:24:28.47:0,28,481	0/0:16,0:16:42.09:0,42,435	0/0:20,2:22:26.56:0,27,486	0/0:29,0:29:87.16:0,87,897	1/1:6,22:28:58.74:473,59,0	0/0:23,2:26:10.76:0,11,509	0/0:15,0:15:41.92:0,42,416	0/0:27,1:28:35.46:0,35,555	0/0:28,0:28:63.05:0,63,612	0/0:17,0:18:50.94:0,51,512	0/0:33,0:33:87.22:0,87,928	0/0:16,1:17:17.43:0,17,373	0/0:26,0:26:54.13:0,54,570	0/0:21,2:23:32.48:0,32,535	1/1:4,0:12:14.25:41,14,0
chr10	98432674	.	TCCCCCCCC	T	5033.29	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=3.581;DP=288;FS=25.543;HRun=14;HaplotypeScore=74.4251;InbreedingCoeff=0.7642;MQ=78.45;MQ0=2;MQRankSum=-7.389;QD=46.18;ReadPosRankSum=5.392;VQSLOD=1.6927;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,26:36:51.04:1192,51,0	0/0:4,0:4:12:0,12,167	0/0:23,0:16:29.76:0,30,677	0/0:17,0:14:27.51:0,28,689	0/0:7,0:7:9.03:0,9,162	0/0:7,0:7:6.02:0,6,146	0/0:12,0:14:25.33:0,25,541	1/1:2,14:16:42.12:925,42,0	0/0:5,0:5:6.02:0,6,209	0/0:5,0:6:3.01:0,3,48	0/0:4,0:4:3.90:0,4,43	0/0:6,0:6:10.59:0,11,253	0/0:6,0:6:17.27:0,17,378	0/0:7,0:7:12.04:0,12,368	0/0:9,0:9:15.05:0,15,575	1/1:4,16:20:36.08:867,36,0	0/0:12,0:12:20.80:0,21,532	1/1:3,9:12:18.04:423,18,0	0/0:4,0:4:1.19:0,1,76	./.	0/0:18,0:18:24.03:0,24,368	0/0:2,0:2:0:0,0,0	0/0:3,0:4:6.02:0,6,115	0/0:9,0:9:18.02:0,18,514	0/0:9,0:9:12.03:0,12,175	1/1:1,17:18:51.15:1120,51,0	0/0:3,0:3:9.03:0,9,245	1/1:0,7:7:21.07:506,21,0
chr10	98432945	.	T	TC	4117.59	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-10.804;DP=535;FS=7.336;HRun=4;HaplotypeScore=54.5084;InbreedingCoeff=0.9812;MQ=73.43;MQ0=0;MQRankSum=-1.870;QD=32.42;ReadPosRankSum=-0.108;VQSLOD=3.8260;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:26:57.19:769,57,0	0/0:5,0:5:12.02:0,12,127	0/0:20,0:18:14.57:0,15,286	0/0:21,0:14:24.57:0,25,202	0/0:19,0:19:48.14:0,48,542	0/0:21,0:20:63.18:0,63,713	0/0:20,0:20:57.15:0,57,638	1/1:1,20:21:57.12:696,57,0	0/0:19,0:19:57.11:0,57,622	0/0:18,0:18:48.13:0,48,536	0/0:16,0:16:39.09:0,39,429	0/0:20,0:20:54.15:0,54,605	0/0:22,0:22:60.15:0,60,662	0/0:15,0:15:36.10:0,36,408	0/0:21,0:21:60.16:0,60,672	1/1:1,18:19:11.12:540,11,0	0/0:30,0:30:81.12:0,81,877	1/1:2,26:28:66.22:902,66,0	0/0:16,0:16:45.13:0,45,508	0/0:14,0:14:39.08:0,39,420	0/0:19,0:19:54.12:0,54,591	0/0:7,0:7:20.65:0,21,213	0/0:14,0:14:39.09:0,39,427	0/0:32,0:32:93.22:0,93,1031	0/0:15,0:15:45.13:0,45,509	1/1:0,18:18:54.17:719,54,0	0/0:24,0:24:63.16:0,63,704	1/1:0,15:15:36.12:491,36,0
chr10	98433537	.	G	GCT	1456.78	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.981;DP=784;FS=0.000;HRun=0;HaplotypeScore=88.8988;InbreedingCoeff=0.9707;MQ=87.24;MQ0=0;MQRankSum=-0.036;QD=31.00;ReadPosRankSum=-0.611;VQSLOD=5.2502;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,181,2340	0/0:3,0:3:9.03:0,9,117	0/0:26,0:26:60.19:0,60,779	0/0:25,0:27:59.96:0,60,714	0/0:19,0:19:48.16:0,48,624	0/0:20,0:20:54.17:0,54,702	0/0:40,0:40:99:0,102,1265	1/1:9,21:30:63.19:1017,63,0	0/0:37,0:37:81.25:0,81,1041	0/0:27,0:27:75.23:0,75,960	0/0:19,0:19:51.16:0,51,659	0/0:29,0:29:78.23:0,78,985	0/0:21,0:21:60.20:0,60,780	0/0:28,0:28:66.21:0,66,845	0/0:30,0:30:84.27:0,84,1093	0/0:27,0:27:75.24:0,75,976	0/0:27,0:27:75.22:0,75,958	0/0:24,0:24:66.21:0,66,856	0/0:23,0:23:57.17:0,57,727	0/0:21,0:21:57.18:0,57,741	0/0:69,0:69:99:0,174,2213	0/0:24,0:24:57.18:0,57,740	0/0:27,0:27:72.22:0,72,922	0/0:34,0:34:81.26:0,81,1053	0/0:25,0:25:66.17:0,66,826	0/0:29,0:29:72.19:0,72,917	0/0:19,0:19:45.14:0,45,572	1/1:2,15:17:33.11:561,33,0
chr10	98434303	.	GT	G	1679.29	PASS	AB=0.818;AC=13;AF=0.232;AN=56;BaseQRankSum=13.042;DP=631;FS=5.294;HRun=12;HaplotypeScore=83.2059;InbreedingCoeff=0.7280;MQ=80.04;MQ0=3;MQRankSum=-2.728;QD=8.57;ReadPosRankSum=1.217;VQSLOD=2.9354;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:24:22.40:347,22,0	0/0:11,0:11:29.98:0,30,279	0/0:26,0:19:20.15:0,20,211	0/1:27,0:21:0.29:0,0,126	0/1:26,4:30:14.79:15,0,578	0/0:17,1:18:24.86:0,25,434	0/0:14,0:14:33.07:0,33,335	1/1:11,15:27:44.69:335,45,0	0/0:25,0:25:66.07:0,66,642	0/0:22,0:24:47.09:0,47,496	0/0:29,1:30:72.96:0,73,710	0/0:17,0:17:31.82:0,32,375	0/0:16,1:18:24.68:0,25,394	0/0:14,0:16:34.69:0,35,320	0/0:25,2:27:36.32:0,36,580	1/1:1,0:25:42.78:126,43,0	0/0:24,0:24:57.96:0,58,569	0/1:6,18:24:10.04:297,0,10	0/0:13,0:13:33.03:0,33,325	0/0:18,4:22:7.86:0,8,429	0/0:10,0:10:24.05:0,24,244	0/0:21,0:21:44.28:0,44,423	0/0:35,1:36:66.84:0,67,817	0/0:21,0:21:60.08:0,60,586	0/0:22,1:24:8.64:0,9,473	1/1:6,24:29:74.67:576,75,0	0/0:37,1:38:73.01:0,73,894	1/1:0,9:9:20.92:162,21,0
chr10	98434918	.	CT	C	350.56	PASS	AB=0.826;AC=14;AF=0.250;AN=56;BaseQRankSum=12.205;DP=624;FS=0.000;HRun=12;HaplotypeScore=96.0599;InbreedingCoeff=0.7344;MQ=66.47;MQ0=2;MQRankSum=-10.459;QD=2.01;ReadPosRankSum=2.249;VQSLOD=-0.5961;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:32.53:94,33,0	0/0:7,0:8:9.94:0,10,129	0/0:25,0:15:26.98:0,27,256	0/0:18,2:16:22.57:0,23,321	0/0:38,2:44:52.02:0,52,787	0/0:32,0:34:83.86:0,84,796	0/1:15,4:19:27.64:28,0,286	1/1:25,0:24:30.52:88,31,0	0/0:22,2:24:4.60:0,5,395	0/0:25,1:28:24.58:0,25,412	0/0:18,1:19:18.43:0,18,347	0/0:21,0:25:53.77:0,54,509	0/0:12,2:14:12.78:0,13,294	0/0:16,0:16:39:0,39,362	0/0:22,2:24:39.83:0,40,565	1/1:21,0:21:24.30:71,24,0	0/0:15,1:16:12.79:0,13,293	1/1:20,0:20:23.07:71,23,0	0/0:26,1:28:33.84:0,34,510	0/0:20,1:21:9.82:0,10,275	0/1:15,4:19:44.86:45,0,312	0/0:13,1:17:6.69:0,7,270	0/0:14,0:18:19.86:0,20,200	0/0:23,0:23:54.09:0,54,541	0/0:17,0:17:30.04:0,30,294	1/1:30,0:30:9.54:78,10,0	0/0:29,0:28:75:0,75,711	1/1:14,0:14:22.41:65,22,0
chr10	98434926	.	TTTTTC	T	3833.92	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=11.749;DP=596;FS=3.649;HRun=0;HaplotypeScore=126.3784;InbreedingCoeff=0.8788;MQ=65.17;MQ0=2;MQRankSum=-9.864;QD=27.58;ReadPosRankSum=2.897;VQSLOD=3.4979;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:57.03:992,57,0	0/0:7,0:7:21.06:0,21,534	0/0:25,0:14:29.74:0,30,761	0/0:24,0:19:55.95:0,56,899	0/0:37,0:37:99:0,105,2688	0/0:31,0:31:87.29:0,87,2378	0/0:17,0:17:48.12:0,48,1254	1/1:2,22:23:60.06:993,60,0	0/0:23,0:23:69.18:0,69,1567	0/0:27,0:27:78.21:0,78,1703	0/0:17,0:17:48.15:0,48,1266	0/0:23,0:23:63.19:0,63,1612	0/0:18,0:18:51.11:0,51,1107	0/0:14,0:14:42.14:0,42,1044	0/0:25,0:25:72.24:0,72,1892	1/1:25,0:25:12.16:195,12,0	0/0:15,0:15:45.13:0,45,1060	1/1:2,16:18:39:673,39,0	0/0:24,0:24:66.20:0,66,1664	0/0:16,0:16:45:0,45,1060	0/0:18,0:18:51.16:0,51,1300	0/0:15,0:15:45.14:0,45,1110	0/0:13,0:13:39.03:0,39,892	0/0:22,0:22:66.23:0,66,1903	0/0:14,0:14:42.09:0,42,896	0/1:28,0:28:46.22:341,0,46	0/0:32,0:31:93.29:0,93,2247	1/1:1,13:14:31.54:640,32,0
chr10	98434927	.	TTTTC	T	3560.51	PASS	AB=0.519;AC=11;AF=0.196;AN=56;BaseQRankSum=13.217;DP=591;FS=3.655;HRun=0;HaplotypeScore=115.2001;InbreedingCoeff=0.9107;MQ=65.36;MQ0=2;MQRankSum=-10.114;QD=26.57;ReadPosRankSum=2.808;VQSLOD=3.6396;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,1:29:57.01:576,57,0	0/0:7,0:7:18.06:0,18,427	0/0:25,0:14:29.27:0,29,646	0/0:24,0:19:54.33:0,54,654	0/0:36,0:36:99:0,105,2194	0/0:31,0:31:87.25:0,87,1957	0/0:17,0:17:48.12:0,48,1043	1/1:22,0:22:60.04:603,60,0	0/0:23,0:23:63.15:0,63,1234	0/0:27,0:27:75.19:0,75,1415	0/0:17,0:17:48.14:0,48,1051	0/0:24,0:24:66.16:0,66,1371	0/0:18,0:18:51.10:0,51,940	0/0:14,0:14:42.10:0,42,811	0/0:25,0:25:72.16:0,72,1544	1/1:2,23:25:35.97:619,36,0	0/0:15,0:15:45.07:0,45,848	1/1:16,0:16:39:387,39,0	0/0:23,0:23:69.16:0,69,1381	0/0:16,0:16:45:0,45,892	0/0:18,0:18:51.15:0,51,1067	0/0:15,0:15:45.09:0,45,901	0/0:14,0:14:41.98:0,42,752	0/0:22,0:22:66.22:0,66,1586	0/0:15,0:15:41.98:0,42,719	0/1:2,25:27:5.60:1019,0,6	0/0:31,0:30:90.18:0,90,1772	1/1:14,0:14:33.08:357,33,0
chr10	98435401	.	ATACCAGGGCTCT	A	3434.74	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.843;DP=472;FS=2.527;HRun=0;HaplotypeScore=157.0348;InbreedingCoeff=0.9695;MQ=80.49;MQ0=0;MQRankSum=-8.282;QD=35.78;ReadPosRankSum=1.253;VQSLOD=3.2591;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,13:30:12.04:432,12,0	0/0:6,0:6:18.06:0,18,1081	0/0:18,0:18:25.76:0,26,1235	0/0:27,0:26:45.61:0,46,1981	0/0:5,0:5:15.05:0,15,829	0/0:19,0:18:51.17:0,51,2809	0/0:21,0:21:48.16:0,48,2863	1/1:13,8:21:21.07:756,21,0	0/0:23,0:23:66.22:0,66,3471	0/0:18,0:18:42.14:0,42,2473	0/0:8,0:8:24.08:0,24,1077	0/0:14,0:14:36.12:0,36,2058	0/0:12,0:12:33.09:0,33,1665	0/0:7,0:7:18.06:0,18,1059	0/0:14,0:14:36.12:0,36,1920	1/1:1,13:14:21.07:756,21,0	0/0:30,0:30:78.27:0,78,4422	1/1:4,9:13:18.06:648,18,0	0/0:27,0:27:72.22:0,72,3938	0/0:14,0:14:33.11:0,33,1829	0/0:40,0:40:99:0,105,5799	0/0:11,0:11:30.10:0,30,1742	0/0:7,0:7:21.07:0,21,1016	0/0:23,0:23:66.22:0,66,3647	0/0:11,0:11:33.11:0,33,1842	1/1:6,4:10:12.04:410,12,0	0/0:21,0:21:60.21:0,60,3541	1/1:1,7:8:12.04:432,12,0
chr10	98436029	.	ACT	A	584.85	PASS	AB=0.766;AC=7;AF=0.125;AN=56;BaseQRankSum=8.993;DP=599;FS=0.000;HRun=0;HaplotypeScore=86.0075;InbreedingCoeff=0.1583;MQ=55.96;MQ0=7;MQRankSum=-7.297;QD=8.01;ReadPosRankSum=-1.593;VQSLOD=2.7411;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:4,2:6:42.79:63,0,43	0/0:9,0:9:27.09:0,27,548	0/0:35,0:19:25.42:0,25,718	0/0:31,0:16:26.12:0,26,564	0/0:11,0:11:29.33:0,29,608	0/0:13,0:11:30.10:0,30,609	0/0:31,0:30:86.60:0,87,1656	0/1:14,3:16:87.70:88,0,546	0/0:37,0:36:99:0,105,2071	0/0:26,0:24:63.22:0,63,1263	0/0:12,0:12:33.11:0,33,669	0/0:29,0:29:64.39:0,64,1565	0/0:28,0:28:81.28:0,81,1618	0/0:24,0:24:69.24:0,69,1377	0/0:20,0:20:60.21:0,60,1214	0/1:10,10:20:99:186,0,157	0/0:26,0:26:78.24:0,78,1542	0/1:9,1:10:10:10,0,43	0/0:26,0:25:68.41:0,68,1342	0/0:16,0:16:48.15:0,48,937	0/0:59,0:53:99:0,114,2286	0/0:17,0:17:39.13:0,39,760	0/0:9,0:9:27.09:0,27,537	0/0:39,0:39:99:0,105,2086	0/0:8,0:8:24.08:0,24,487	0/1:7,8:15:40.10:270,0,40	0/0:14,0:14:39.13:0,39,780	1/1:1,2:3:9:99,9,0
chr10	98436030	.	CTA	C	601.37	PASS	AB=0.920;AC=7;AF=0.125;AN=56;BaseQRankSum=8.756;DP=596;FS=0.000;HRun=0;HaplotypeScore=85.2119;InbreedingCoeff=0.1556;MQ=54.91;MQ0=8;MQRankSum=-7.700;QD=8.59;ReadPosRankSum=-1.999;VQSLOD=2.8884;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:5,1:6:29.37:63,0,29	0/0:9,0:9:27.09:0,27,533	0/0:33,0:17:38.89:0,39,692	0/0:33,0:16:29.31:0,29,512	0/0:12,0:12:32.34:0,32,651	0/0:13,1:12:30.10:0,30,604	0/0:32,0:31:86.46:0,86,1612	0/1:17,0:16:98.87:99,0,469	0/0:37,0:36:99:0,102,2013	0/0:25,0:23:63.20:0,63,1166	0/0:11,1:12:33.11:0,33,654	0/0:29,1:30:50.70:0,51,1569	0/0:28,0:28:81.26:0,81,1560	0/0:24,0:24:69.22:0,69,1317	0/0:20,0:20:60.21:0,60,1191	0/1:20,0:20:99:187,0,134	0/0:25,0:25:75.26:0,75,1482	0/1:6,2:8:15.30:15,0,40	0/0:26,0:25:66.24:0,66,1260	0/0:16,0:16:45.15:0,45,893	0/0:56,5:54:99:0,114,2241	0/0:18,0:17:39.11:0,39,710	0/0:9,0:9:27.08:0,27,508	0/0:38,0:38:90.52:0,91,2000	0/0:8,0:8:24.08:0,24,487	0/1:15,1:14:28.01:270,0,28	0/0:13,1:14:39.12:0,39,749	1/1:3,0:3:9:99,9,0
chr10	98436032	.	ACACCAC	A	435.10	PASS	AB=0.760;AC=7;AF=0.125;AN=56;BaseQRankSum=7.374;DP=594;FS=5.219;HRun=0;HaplotypeScore=126.4542;InbreedingCoeff=0.6065;MQ=53.34;MQ0=11;MQRankSum=-6.482;QD=7.91;ReadPosRankSum=-0.397;VQSLOD=2.3412;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:6:5.05:0,5,45	0/0:9,0:9:18.06:0,18,436	0/0:33,0:16:20.61:0,21,331	0/0:31,0:14:9.25:0,9,179	0/0:13,0:13:30.57:0,31,826	0/0:15,0:13:24.95:0,25,601	0/0:29,2:30:24.32:0,24,1533	1/1:17,0:15:0.88:14,1,0	0/0:35,0:35:82.52:0,83,2148	0/0:23,0:21:33.11:0,33,1017	0/0:13,0:13:12.93:0,13,239	0/0:30,0:30:27.79:0,28,1751	0/0:27,0:27:69.18:0,69,1900	0/0:26,0:26:54.13:0,54,1362	0/0:20,0:20:54.07:0,54,1473	0/1:13,6:19:69.15:312,0,69	0/0:25,0:25:48.08:0,48,1160	0/0:7,0:8:11.25:0,11,162	0/0:25,0:24:25.31:0,25,582	0/0:15,0:15:33.10:0,33,961	0/0:56,0:57:90.31:0,90,2497	0/0:16,0:16:24.06:0,24,549	0/0:8,0:8:18.06:0,18,389	0/0:34,0:38:81.17:0,81,2258	0/0:8,0:8:24.08:0,24,695	1/1:15,0:14:18:213,18,0	0/0:13,0:13:27.09:0,27,794	1/1:3,0:3:2.96:19,3,0
chr10	98436038	.	C	CTA	626.45	PASS	AB=0.936;AC=8;AF=0.143;AN=56;BaseQRankSum=8.980;DP=600;FS=2.766;HRun=0;HaplotypeScore=89.8631;InbreedingCoeff=0.0895;MQ=51.55;MQ0=20;MQRankSum=-9.067;QD=5.91;ReadPosRankSum=-1.811;VQSLOD=2.9275;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:7:20.41:90,0,20	0/0:8,0:8:23.97:0,24,358	0/0:27,0:11:33.11:0,33,502	0/1:30,0:11:13.92:14,0,253	0/0:13,0:13:36.02:0,36,577	0/0:18,0:14:32.36:0,32,512	0/0:34,0:30:81.30:0,81,1242	0/1:21,0:17:7.04:7,0,500	0/0:37,0:36:99:0,106,1626	0/0:26,0:21:54.17:0,54,834	0/0:11,0:11:26.44:0,26,408	0/0:31,0:31:90.04:0,90,1419	0/0:29,0:29:84.27:0,84,1327	0/0:26,0:26:72.24:0,72,1149	0/0:21,0:21:63.21:0,63,1005	0/1:11,10:20:84.89:359,0,85	0/0:23,0:23:69.18:0,69,1064	0/1:10,0:9:16.04:16,0,63	0/0:23,0:23:57.48:0,57,840	0/0:14,0:14:42.14:0,42,681	0/0:68,0:57:99:0,120,1835	0/0:15,0:14:30.08:0,30,441	0/0:9,0:9:27.09:0,27,423	0/0:39,0:39:99:0,108,1680	0/0:8,0:8:24.08:0,24,391	0/1:14,1:13:41.31:189,0,41	0/0:13,0:13:36.12:0,36,586	1/1:1,1:2:6.02:84,6,0
chr10	98436071	.	TCAC	T	513.17	PASS	AB=0.877;AC=6;AF=0.111;AN=54;BaseQRankSum=7.967;DP=722;FS=0.000;HRun=0;HaplotypeScore=102.8194;InbreedingCoeff=0.1318;MQ=45.30;MQ0=79;MQRankSum=-7.269;QD=4.31;ReadPosRankSum=-1.003;VQSLOD=2.0284;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:4.73:28,5,0	0/0:6,0:6:14.84:0,15,253	0/0:17,0:3:8.92:0,9,65	./.	0/0:13,0:13:33.08:0,33,645	0/0:31,0:23:58.03:0,58,929	0/0:43,0:35:89.09:0,89,1467	0/1:23,5:13:74.90:192,0,75	0/0:32,0:32:90.19:0,90,1478	0/0:41,0:22:54.12:0,54,1003	0/0:6,0:4:9.01:0,9,145	0/0:34,0:33:58.63:0,59,1581	0/0:32,0:31:65.43:0,65,1595	0/0:29,0:26:65.49:0,65,1113	0/0:25,0:22:63.13:0,63,1106	0/1:29,0:25:91.30:91,0,203	0/0:27,0:26:75.01:0,75,1234	0/0:9,0:8:4.56:0,5,46	0/0:24,0:13:35.99:0,36,579	0/0:16,0:14:42.11:0,42,759	0/0:97,0:74:99:0,144,2265	0/0:18,0:12:23.89:0,24,316	0/0:5,0:4:9.03:0,9,159	0/0:39,0:38:98.27:0,98,1818	0/0:18,0:14:39.11:0,39,692	0/1:35,8:28:94.87:269,0,95	0/0:12,0:12:33.05:0,33,527	0/1:7,2:9:39.43:52,0,39
chr10	98436101	.	CCAT	C	625.19	PASS	AB=0.901;AC=6;AF=0.107;AN=56;BaseQRankSum=9.471;DP=786;FS=17.279;HRun=0;HaplotypeScore=93.9996;InbreedingCoeff=-0.1109;MQ=43.27;MQ0=135;MQRankSum=-6.029;QD=4.06;ReadPosRankSum=-1.781;VQSLOD=-0.1203;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:11:59.18:59,0,114	0/0:6,0:6:14.93:0,15,195	0/1:16,0:3:8.66:9,0,72	0/1:30,0:3:4.69:5,0,13	0/0:15,0:14:33.08:0,33,615	0/0:33,0:26:60.06:0,60,1133	0/0:47,0:34:86.27:0,86,1388	0/0:32,0:6:6:0,6,69	0/0:32,0:29:75.90:0,76,1469	0/0:43,0:20:48.15:0,48,945	0/0:7,0:4:11.96:0,12,155	0/0:30,0:29:11.19:0,11,1210	0/0:29,0:27:58.77:0,59,1072	0/0:24,0:21:41.49:0,41,790	0/0:20,0:16:39.08:0,39,740	0/1:11,18:21:40.77:304,0,41	0/0:34,0:33:54.52:0,55,1695	0/0:11,0:10:8.43:0,8,82	0/0:32,0:11:24:0,24,386	0/0:18,0:10:30.08:0,30,552	0/0:120,0:94:99:0,157,2590	0/0:16,0:9:27.04:0,27,479	0/0:11,0:7:18.03:0,18,272	0/0:36,0:35:85.71:0,86,1525	0/0:27,0:19:39.04:0,39,648	0/1:42,15:37:99:307,0,107	0/0:9,0:8:21.04:0,21,377	0/1:5,0:5:36.04:60,0,36
chr10	98437374	.	TG	T	1532.86	PASS	AB=0.854;AC=46;AF=0.958;AN=48;BaseQRankSum=-3.739;DP=114;FS=17.210;HRun=8;HaplotypeScore=27.5611;InbreedingCoeff=-0.1398;MQ=96.52;MQ0=0;MQRankSum=-1.509;QD=13.45;ReadPosRankSum=1.040;VQSLOD=1.2745;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,2:6:8.99:87,9,0	./.	0/1:14,4:15:57.04:95,0,57	0/1:7,1:8:17.35:17,0,20	1/1:3,0:3:8.99:77,9,0	1/1:0,1:1:3:29,3,0	1/1:7,2:9:17.91:145,18,0	1/1:2,4:6:12.02:115,12,0	./.	1/1:3,1:4:6.01:57,6,0	1/1:3,0:3:6.01:58,6,0	1/1:3,0:3:2.99:25,3,0	1/1:2,1:3:5.99:53,6,0	1/1:0,1:1:3:29,3,0	1/1:2,3:5:8.95:75,9,0	1/1:2,1:3:6:54,6,0	1/1:5,4:9:21.03:203,21,0	1/1:2,2:4:6.01:58,6,0	1/1:2,3:5:12.01:111,12,0	1/1:2,0:2:6.01:58,6,0	1/1:4,0:4:3:29,3,0	1/1:4,1:5:6.01:58,6,0	1/1:2,1:3:9:81,9,0	1/1:3,0:3:3:29,3,0	./.	1/1:2,1:3:3:29,3,0	1/1:1,2:3:6.01:58,6,0	./.
chr10	98437402	.	TC	T	4979.72	PASS	AB=0.785;AC=50;AF=0.962;AN=52;BaseQRankSum=-2.940;DP=173;FS=3.454;HRun=4;HaplotypeScore=26.9733;InbreedingCoeff=-0.0718;MQ=92.75;MQ0=0;MQRankSum=-3.350;QD=28.95;ReadPosRankSum=0.308;VQSLOD=3.3772;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:30.09:359,30,0	1/1:0,1:1:3.01:36,3,0	0/1:7,3:9:41.31:41,0,67	0/1:8,3:11:29.57:99,0,30	1/1:0,6:6:18.06:216,18,0	1/1:0,6:6:15.05:180,15,0	1/1:0,9:9:27.08:324,27,0	1/1:2,13:15:42.13:504,42,0	1/1:0,6:6:15.05:180,15,0	1/1:0,6:6:18.06:216,18,0	1/1:0,3:3:9.03:108,9,0	1/1:0,6:6:12.04:144,12,0	1/1:1,5:6:15.05:180,15,0	1/1:0,3:3:6.02:72,6,0	1/1:1,5:6:15.05:180,15,0	1/1:0,2:2:6.02:72,6,0	1/1:1,6:7:15.05:180,15,0	1/1:0,5:5:15.05:180,15,0	1/1:0,10:10:30.09:360,30,0	1/1:0,4:4:12.04:144,12,0	1/1:0,14:14:36.11:432,36,0	1/1:0,6:6:12.04:144,12,0	1/1:2,4:6:18.05:212,18,0	1/1:0,7:7:18.05:213,18,0	./.	1/1:0,3:3:9.01:96,9,0	1/1:0,3:3:9.03:108,9,0	./.
chr10	98438081	.	GGCTACAGGCCGA	G	918.40	PASS	AB=0.545;AC=1;AF=0.019;AN=54;BaseQRankSum=5.226;DP=486;FS=1.316;HRun=0;HaplotypeScore=161.2582;InbreedingCoeff=-0.0275;MQ=71.51;MQ0=0;MQRankSum=-4.246;QD=76.53;ReadPosRankSum=1.207;VQSLOD=3.7679;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,123,5532	0/0:4,0:4:12.04:0,12,697	0/0:6,0:6:12.04:0,12,351	0/0:8,0:8:10.72:0,11,355	./.	0/0:11,0:11:24.08:0,24,1013	0/0:32,0:32:96.33:0,96,5543	0/0:18,0:18:51.15:0,51,2309	0/0:19,0:19:57.20:0,57,2953	0/0:7,0:7:18.06:0,18,744	0/0:3,0:3:9.03:0,9,558	0/0:23,0:23:66.23:0,66,3603	0/0:17,0:17:48.16:0,48,2515	0/0:21,0:21:60.21:0,60,3415	0/0:21,0:21:60.21:0,60,3281	0/0:12,0:12:33.11:0,33,1929	0/0:37,0:37:99:0,111,6420	0/0:32,0:32:96.33:0,96,5803	0/0:19,0:19:54.19:0,54,2371	0/0:4,0:4:12.04:0,12,726	0/0:61,0:61:99:0,169,8148	0/0:10,0:10:30.09:0,30,1336	0/0:5,0:5:15.05:0,15,767	0/0:31,0:31:90.31:0,90,5239	0/0:14,0:14:42.14:0,42,1977	0/1:2,10:12:99:993,0,177	0/0:6,0:6:18.06:0,18,1057	0/0:6,0:6:18.06:0,18,1094
chr10	98438244	.	AC	A	1592.14	PASS	AB=1.000;AC=13;AF=0.250;AN=52;BaseQRankSum=3.070;DP=184;FS=3.180;HRun=7;HaplotypeScore=24.4014;InbreedingCoeff=0.5949;MQ=82.86;MQ0=0;MQRankSum=-0.062;QD=16.94;ReadPosRankSum=5.157;VQSLOD=2.2667;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:31:48.20:655,48,0	0/0:1,0:1:3.01:0,3,32	0/1:8,0:8:8.13:8,0,18	0/0:6,0:6:0.05:0,0,81	0/0:4,0:4:6.02:0,6,75	0/0:5,0:5:12.04:0,12,150	0/0:6,0:6:15.03:0,15,174	1/1:4,11:15:27.05:274,27,0	0/0:5,0:5:8.85:0,9,73	0/0:2,0:2:3:0,3,27	./.	0/0:3,0:3:6.91:0,7,77	0/0:4,0:4:11.97:0,12,131	0/0:4,0:4:11.62:0,12,113	0/0:4,0:4:8.38:0,8,70	1/1:2,11:13:24.05:245,24,0	0/0:5,0:5:6.02:0,6,76	1/1:3,14:17:30.06:302,30,0	0/0:5,0:4:9.02:0,9,101	0/0:1,0:1:3.01:0,3,38	0/0:13,0:13:39.03:0,39,417	0/0:3,0:3:6.02:0,6,75	0/0:6,0:6:12.04:0,12,150	0/0:7,0:7:15.01:0,15,169	./.	1/1:0,8:8:24.05:245,24,0	0/0:2,0:2:3:0,3,25	1/1:0,2:2:3.01:31,3,0
chr10	98439007	.	G	GT	803.54	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-0.512;DP=353;FS=6.728;HRun=2;HaplotypeScore=44.5639;InbreedingCoeff=0.8048;MQ=79.62;MQ0=2;MQRankSum=-0.032;QD=11.48;ReadPosRankSum=0.770;VQSLOD=1.5944;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:21:21.54:277,22,0	0/0:7,0:7:18.03:0,18,196	0/0:20,0:18:50.70:0,51,396	0/1:12,0:12:2.99:3,0,107	0/0:9,0:9:20.93:0,21,196	0/0:20,0:20:53.86:0,54,541	0/0:22,0:22:56.07:0,56,560	0/0:10,0:10:20.85:0,21,167	0/0:10,0:10:27.06:0,27,311	0/0:12,0:12:29.91:0,30,267	0/0:7,0:7:11.92:0,12,102	0/0:11,0:11:26.94:0,27,270	0/0:4,0:4:11.95:0,12,128	0/0:5,0:5:15.03:0,15,166	0/0:12,0:12:33:0,33,349	1/1:0,0:10:2.99:23,3,0	0/0:22,0:22:59.93:0,60,633	1/1:8,9:17:39.29:455,39,0	0/0:10,0:10:26.83:0,27,251	0/0:12,0:12:32.96:0,33,331	0/0:16,0:16:32.97:0,33,306	0/0:10,0:10:21:0,21,205	0/0:9,0:9:14.97:0,15,141	0/0:25,0:24:63.16:0,63,740	0/0:6,0:6:17.90:0,18,169	1/1:1,0:9:24.06:194,24,0	0/0:23,0:23:50.67:0,51,537	1/1:1,0:1:1.82:5,2,0
chr10	98439089	.	TA	T	776.95	PASS	AB=0.909;AC=5;AF=0.089;AN=56;BaseQRankSum=6.393;DP=422;FS=7.754;HRun=9;HaplotypeScore=43.3783;InbreedingCoeff=0.8679;MQ=83.41;MQ0=0;MQRankSum=-0.734;QD=15.54;ReadPosRankSum=-1.533;VQSLOD=2.6191;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:48.14:0,48,554	0/0:9,0:9:27.08:0,27,312	0/0:17,0:15:24.97:0,25,268	0/0:13,0:13:29.63:0,30,290	0/0:28,1:29:56.96:0,57,898	0/0:18,0:18:54.16:0,54,623	0/0:13,0:13:33.10:0,33,381	1/1:4,18:22:53.98:486,54,0	0/0:10,0:10:30.08:0,30,336	0/0:18,0:19:56.99:0,57,624	0/0:20,0:20:60.17:0,60,684	0/0:14,0:14:36.10:0,36,407	0/0:12,0:12:36.10:0,36,410	0/0:9,0:9:24.07:0,24,277	0/0:12,0:12:33.10:0,33,381	0/1:9,1:10:0.39:0,0,250	0/0:18,0:18:51.13:0,51,577	0/0:14,0:14:41.99:0,42,465	0/0:8,0:8:18.04:0,18,197	0/0:14,0:14:33.10:0,33,381	0/0:15,0:15:36.08:0,36,403	0/0:19,0:19:54.16:0,54,623	0/0:15,0:15:45.13:0,45,513	0/0:16,0:16:45.13:0,45,519	0/0:11,0:11:33.09:0,33,373	0/0:13,0:13:36.11:0,36,416	0/0:15,0:15:36.09:0,36,405	1/1:0,18:18:45.02:412,45,0
chr10	98440175	.	GGGGAGGGGA	G	4185.73	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.692;DP=532;FS=7.869;HRun=0;HaplotypeScore=144.4541;InbreedingCoeff=0.9840;MQ=72.92;MQ0=2;MQRankSum=-9.711;QD=40.25;ReadPosRankSum=-1.484;VQSLOD=2.7018;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:21:39.13:1082,39,0	0/0:8,0:8:24.08:0,24,921	0/0:27,0:25:48.93:0,49,1396	0/0:22,0:17:44.93:0,45,1519	0/0:17,0:17:48.16:0,48,2255	0/0:16,0:16:48.16:0,48,2106	0/0:20,0:20:51.17:0,51,1986	1/1:8,16:24:46.24:865,46,0	0/0:12,0:12:33.11:0,33,1315	0/0:13,0:13:36.12:0,36,1518	0/0:13,0:13:36.12:0,36,1491	0/0:26,0:26:72.23:0,72,3058	0/0:22,0:22:63.22:0,63,2797	0/0:19,0:19:54.19:0,54,2462	0/0:27,0:27:81.24:0,81,3414	1/1:14,0:14:30.10:629,30,0	0/0:26,0:26:78.25:0,78,3300	1/1:7,12:19:8.99:197,9,0	0/0:23,0:23:63.20:0,63,2574	0/0:13,0:13:33.10:0,33,1248	0/0:30,0:30:84.29:0,84,3885	0/0:14,0:14:39.13:0,39,1686	0/0:18,0:18:51.18:0,51,2198	0/0:30,0:30:81.28:0,81,3642	0/0:12,0:12:36.12:0,36,1380	1/1:6,13:19:39.12:974,39,0	0/0:19,0:19:54.19:0,54,2224	1/1:2,5:7:15.05:439,15,0
chr10	98440179	.	AGGGGAGGGAG	A	2311.77	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=11.083;DP=515;FS=7.580;HRun=0;HaplotypeScore=155.0098;InbreedingCoeff=0.6346;MQ=71.80;MQ0=2;MQRankSum=-10.059;QD=24.59;ReadPosRankSum=0.986;VQSLOD=2.5848;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:0.10:455,0,0	0/0:8,0:8:24.08:0,24,1061	0/0:25,0:23:50.91:0,51,1774	0/0:22,0:18:47.46:0,47,1808	0/0:16,0:16:48.16:0,48,2564	0/0:17,0:17:51.18:0,51,2550	0/0:18,0:18:54.19:0,54,2482	0/1:18,0:19:99:305,0,168	0/0:11,0:11:33.11:0,33,1581	0/0:12,0:12:36.12:0,36,1761	0/0:13,0:13:36.12:0,36,1751	0/0:25,0:25:75.26:0,75,3663	0/0:22,0:22:66.23:0,66,3351	0/0:19,0:19:54.19:0,54,2810	0/0:27,0:27:81.28:0,81,4029	1/1:1,14:15:30.10:1018,30,0	0/0:28,0:28:84.29:0,84,4065	0/1:16,0:16:31.22:75,0,31	0/0:23,0:23:66.23:0,66,3133	0/0:12,0:12:36.12:0,36,1535	0/0:30,0:30:90.31:0,90,4682	0/0:14,0:14:39.13:0,39,1986	0/0:18,0:18:54.19:0,54,2645	0/0:28,0:28:81.28:0,81,4194	0/0:13,0:13:39.13:0,39,1782	1/1:16,0:16:4.36:393,4,0	0/0:18,0:18:54.19:0,54,2630	1/1:7,0:7:15.05:217,15,0
chr10	98440654	.	A	AC	773.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.315;DP=548;FS=3.939;HRun=5;HaplotypeScore=74.7629;InbreedingCoeff=0.9317;MQ=85.91;MQ0=0;MQRankSum=-0.652;QD=33.64;ReadPosRankSum=-0.600;VQSLOD=3.7988;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,105,1110	0/0:12,0:12:33.08:0,33,354	0/0:20,0:20:48.06:0,48,489	0/0:25,0:25:48.52:0,49,494	0/0:13,0:13:21.04:0,21,225	0/0:19,0:19:51.12:0,51,544	0/0:28,0:28:72.18:0,72,774	0/0:13,0:13:30.06:0,30,313	0/0:16,0:16:45.11:0,45,479	0/0:18,0:18:42.09:0,42,441	0/0:12,0:12:30.06:0,30,320	0/0:20,0:20:54.13:0,54,579	0/0:20,0:20:54.14:0,54,580	0/0:19,0:19:57.13:0,57,604	0/0:19,0:19:57.13:0,57,604	0/0:12,0:12:30.07:0,30,322	1/1:1,22:23:66.21:868,66,0	0/0:18,0:18:51.13:0,51,548	0/0:16,0:16:39.09:0,39,412	0/0:17,0:17:36.08:0,36,387	0/0:48,0:48:99:0,129,1380	0/0:19,0:19:28.10:0,28,455	0/0:5,0:5:9.02:0,9,97	0/0:26,0:25:69.17:0,69,741	0/0:18,0:18:33.05:0,33,354	0/0:25,0:25:66.16:0,66,709	0/0:18,0:18:51.13:0,51,548	0/0:7,0:7:18.05:0,18,193
chr10	98441185	.	CGTGT	C	3724.98	PASS	AB=0.708;AC=22;AF=0.423;AN=52;BaseQRankSum=2.051;DP=742;FS=6.366;HRun=0;HaplotypeScore=139.2258;InbreedingCoeff=0.6047;MQ=60.72;MQ0=7;MQRankSum=0.845;QD=10.96;ReadPosRankSum=3.565;VQSLOD=2.8431;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:8.75:0,9,114	0/0:8,0:8:3.01:0,3,69	./.	0/0:32,0:20:3.01:0,3,42	0/0:20,0:24:32.52:0,33,665	0/1:8,8:17:5.95:191,0,6	1/1:14,7:22:9.02:122,9,0	0/0:19,0:19:11.85:0,12,79	1/1:6,8:16:21.06:292,21,0	0/0:36,0:36:50.84:0,51,861	0/0:24,0:25:29.82:0,30,555	1/1:18,14:34:41.15:583,41,0	1/1:16,13:29:27.09:424,27,0	1/1:12,5:17:8.90:110,9,0	1/1:14,9:25:23.10:338,23,0	0/0:17,0:17:35.14:0,35,485	1/1:14,21:37:40.20:688,40,0	0/0:29,0:29:18.06:0,18,278	./.	0/0:17,0:19:23.55:0,24,393	0/0:69,0:68:60.17:0,60,1587	1/1:20,15:39:20.63:329,21,0	0/1:8,13:21:34.20:258,0,34	1/1:11,12:24:8.31:272,8,0	0/0:26,0:29:50.76:0,51,980	0/1:21,1:28:63.22:63,0,205	0/1:20,2:28:55.86:56,0,320	0/0:9,0:9:18.06:0,18,365
chr10	98441193	.	T	TGTGTGC	363.43	PASS	AB=0.859;AC=5;AF=0.089;AN=56;BaseQRankSum=1.902;DP=747;FS=0.000;HRun=0;HaplotypeScore=177.9689;InbreedingCoeff=0.4404;MQ=57.08;MQ0=9;MQRankSum=-0.097;QD=3.33;ReadPosRankSum=4.171;VQSLOD=2.3897;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,26:41:1.41:73,0,1	0/0:7,0:7:11.97:0,12,97	0/0:35,0:19:36:0,36,354	0/0:38,0:17:29.84:0,30,262	0/0:26,0:26:50.80:0,51,635	0/0:17,0:17:26.97:0,27,286	0/0:23,0:23:44.95:0,45,396	0/0:17,0:17:27.76:0,28,223	0/0:19,0:19:41.94:0,42,481	0/0:43,0:42:99:0,118,1240	0/0:24,0:24:51.89:0,52,649	0/0:31,0:31:66.24:0,66,802	0/0:30,0:30:55.75:0,56,600	0/0:17,0:17:29.91:0,30,274	0/0:21,0:21:41.97:0,42,457	0/1:17,0:17:33.77:34,0,47	0/0:36,0:35:71.95:0,72,887	1/1:9,18:29:19.33:367,19,0	0/0:10,0:10:20.57:0,21,147	0/0:18,0:18:44.95:0,45,459	0/0:69,0:67:99:0,164,1883	0/0:38,0:38:35.74:0,36,399	0/1:22,0:22:9.90:10,0,355	0/0:28,0:27:48.01:0,48,549	0/0:29,0:29:74.70:0,75,921	0/0:29,0:28:74.04:0,74,763	0/0:23,0:23:63.10:0,63,848	0/0:10,0:9:4.18:0,4,132
chr10	98441197	.	T	TATGC	846.03	PASS	AB=0.946;AC=4;AF=0.071;AN=56;BaseQRankSum=-1.223;DP=733;FS=0.841;HRun=0;HaplotypeScore=148.3465;InbreedingCoeff=0.5056;MQ=55.48;MQ0=9;MQRankSum=3.385;QD=9.40;ReadPosRankSum=5.161;VQSLOD=2.9238;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:43:2.86:3,0,99	0/0:6,0:6:15.04:0,15,214	0/0:29,0:13:33.24:0,33,576	0/0:42,0:13:30.10:0,30,511	0/0:26,0:26:57.18:0,57,941	0/0:16,0:16:30.08:0,30,402	0/0:22,0:22:51.12:0,51,729	0/0:15,0:15:41.98:0,42,556	0/0:19,0:19:42.12:0,42,562	0/0:43,0:42:99:0,125,1973	0/0:25,0:25:57.17:0,57,938	0/0:30,0:30:73.10:0,73,970	0/0:27,0:27:60.18:0,60,801	0/0:14,0:14:30.08:0,30,429	0/0:21,0:21:48.11:0,48,606	1/1:2,14:18:35.79:925,36,0	0/0:34,0:33:75.21:0,75,977	0/1:27,0:29:26.53:27,0,64	0/0:9,0:9:21.06:0,21,305	0/0:17,0:17:45.13:0,45,694	0/0:70,0:68:99:0,183,2927	0/0:38,0:38:45.45:0,45,563	0/0:22,0:22:21.03:0,21,445	0/0:28,0:27:48.16:0,48,689	0/0:28,0:28:78.18:0,78,1254	0/0:30,0:29:87.01:0,87,1246	0/0:22,0:22:63.19:0,63,944	0/0:10,0:9:20.99:0,21,306
chr10	98441384	.	CTGTA	C	606.16	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.531;DP=661;FS=0.000;HRun=0;HaplotypeScore=107.8256;InbreedingCoeff=0.9761;MQ=93.26;MQ0=0;MQRankSum=-1.344;QD=37.88;ReadPosRankSum=0.921;VQSLOD=3.6133;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,3450	0/0:7,0:7:21.07:0,21,609	0/0:31,0:31:93.26:0,93,2430	0/0:37,0:37:99:0,111,2892	0/0:10,0:10:30.10:0,30,867	0/0:19,0:19:57.20:0,57,1599	0/0:25,0:25:75.26:0,75,2170	0/0:27,0:27:78.27:0,78,2255	0/0:26,0:26:78.27:0,78,2185	0/0:21,0:21:63.22:0,63,1790	0/0:7,0:7:21.07:0,21,581	0/0:30,0:30:90.31:0,90,2563	0/0:33,0:33:99:0,99,2797	0/0:22,0:22:66.23:0,66,1898	0/0:27,0:27:81.24:0,81,2249	1/1:0,16:16:36.06:701,36,0	0/0:39,0:39:99:0,114,3211	0/0:23,0:23:66.23:0,66,1858	0/0:16,0:16:45.15:0,45,1273	0/0:15,0:15:42.13:0,42,1109	0/0:37,0:37:99:0,105,3030	0/0:20,0:20:57.20:0,57,1615	0/0:17,0:17:48.15:0,48,1318	0/0:41,0:41:99:0,108,3063	0/0:17,0:17:51.16:0,51,1380	0/0:27,0:27:81.28:0,81,2292	0/0:22,0:21:60.21:0,60,1724	0/0:5,0:5:15.05:0,15,434
chr10	98441474	.	CGTGTGTGT	C	1260.07	PASS	AB=0.729;AC=14;AF=0.269;AN=52;BaseQRankSum=4.752;DP=591;FS=15.059;HRun=0;HaplotypeScore=158.8912;InbreedingCoeff=0.2659;MQ=67.41;MQ0=15;MQRankSum=-4.556;QD=5.65;ReadPosRankSum=-0.068;VQSLOD=1.6075;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:14.40:0,14,131	0/0:5,0:5:9.03:0,9,359	0/0:30,0:18:1.82:0,2,5	./.	0/0:13,0:13:2.60:0,3,123	0/0:10,6:15:8.69:0,9,72	0/1:17,2:19:5.92:111,0,6	0/1:27,0:32:10.60:67,0,11	1/1:15,9:25:4.03:147,4,0	0/0:26,0:23:20.92:0,21,471	0/0:12,0:11:9.03:0,9,289	0/1:11,10:21:0.60:172,0,1	0/1:6,9:15:24.06:427,0,24	1/1:8,8:16:9.03:226,9,0	0/1:11,14:26:15.93:141,0,16	0/0:17,0:17:9.49:0,9,237	0/0:32,0:33:60.59:0,61,1751	0/0:12,0:16:11.97:0,12,95	0/0:14,0:13:10.27:0,10,200	0/0:13,0:13:5.61:0,6,113	0/0:52,0:53:77.80:0,78,2194	1/1:9,0:16:1.81:6,2,0	1/1:8,5:13:1.82:6,2,0	0/1:21,17:39:28.67:100,0,29	0/0:19,0:19:30.09:0,30,1108	0/0:12,0:18:21.94:0,22,388	0/0:12,0:13:18.04:0,18,546	./.
chr10	98442596	.	C	CTGTGTGTGTG	3787.89	PASS	AB=0.938;AC=20;AF=0.417;AN=48;BaseQRankSum=1.171;DP=853;FS=2.122;HRun=0;HaplotypeScore=289.6816;InbreedingCoeff=0.2895;MQ=57.61;MQ0=15;MQRankSum=-3.786;QD=8.34;ReadPosRankSum=-0.932;VQSLOD=2.2686;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:21:15.02:0,15,265	0/1:16,0:17:7.10:7,0,511	./.	./.	0/1:19,0:19:0.08:0,0,493	1/1:30,0:32:35.90:885,36,0	1/1:23,0:23:14.97:158,15,0	1/1:40,0:36:19.78:327,20,0	1/1:31,3:36:44.31:756,44,0	0/1:43,0:42:21.87:22,0,788	0/0:23,0:24:36.57:0,37,812	./.	0/1:14,9:31:8.55:75,0,9	1/1:23,0:23:16.41:300,16,0	0/0:11,0:28:0.22:0,0,1	0/1:48,0:48:99:150,0,666	0/0:31,0:32:18.14:0,18,1270	0/0:14,0:18:9.11:0,9,261	0/1:27,0:25:5.27:5,0,222	0/0:32,0:36:46.23:0,46,880	0/0:55,0:57:34.99:0,35,1709	1/1:8,19:35:2.93:30,3,0	./.	0/1:37,0:37:22.73:607,0,23	0/0:24,0:23:19.69:0,20,630	0/1:34,0:38:48.77:466,0,49	0/0:27,0:29:38.50:0,39,1242	0/0:18,0:18:1.01:0,1,436
chr10	98442626	.	GTC	G	2712.35	PASS	AB=0.945;AC=11;AF=0.196;AN=56;BaseQRankSum=10.409;DP=816;FS=9.448;HRun=0;HaplotypeScore=178.1129;InbreedingCoeff=0.1837;MQ=50.27;MQ0=24;MQRankSum=-1.516;QD=8.89;ReadPosRankSum=-2.491;VQSLOD=1.7959;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:46.28:0,46,390	0/0:17,0:17:26.63:0,27,548	0/0:12,0:4:2.14:0,2,40	0/0:12,0:4:5.17:0,5,74	0/0:20,0:19:33.32:0,33,501	0/1:26,6:32:61.47:272,0,61	0/1:27,1:27:95.87:96,0,139	1/1:36,9:40:18.17:699,18,0	0/1:33,2:35:99:218,0,212	0/0:35,0:31:42.37:0,42,802	0/0:20,0:20:36.18:0,36,599	0/0:27,0:26:23.95:0,24,196	0/0:25,0:25:29.14:0,29,203	0/1:23,2:24:35.96:36,0,294	0/0:30,0:30:29.78:0,30,248	1/1:26,19:45:83.85:1342,84,0	0/0:36,0:36:39.47:0,39,981	0/0:20,0:19:38.23:0,38,336	0/0:15,0:13:24.15:0,24,339	0/0:38,0:38:49.60:0,50,929	0/0:64,0:61:97.15:0,97,1863	0/0:29,0:29:22.53:0,23,195	0/0:23,2:24:20.90:0,21,162	0/1:41,3:43:99:106,0,356	0/0:30,0:28:48.69:0,49,777	0/1:32,0:30:4.51:5,0,444	0/0:27,0:27:32.89:0,33,884	0/1:19,0:19:95.79:96,0,113
chr10	98442646	.	GTC	G	678.65	PASS	AB=0.826;AC=2;AF=0.036;AN=56;BaseQRankSum=8.247;DP=801;FS=9.571;HRun=0;HaplotypeScore=183.5867;InbreedingCoeff=-0.0375;MQ=51.78;MQ0=22;MQRankSum=-3.665;QD=11.91;ReadPosRankSum=-3.435;VQSLOD=1.8563;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:54.12:0,54,930	0/0:16,0:16:42.14:0,42,809	0/0:24,0:9:23.72:0,24,356	0/0:21,0:7:17.21:0,17,345	0/0:28,0:28:69.16:0,69,1177	0/1:29,0:29:35.39:35,0,306	0/0:25,0:24:40.42:0,40,670	0/0:42,0:41:99:0,120,1769	0/0:27,1:28:36.34:0,36,844	0/0:28,0:26:78.18:0,78,1381	0/0:16,0:16:38.87:0,39,574	0/0:25,0:24:36.11:0,36,661	0/0:28,0:28:43.59:0,44,780	0/0:25,0:24:42.65:0,43,797	0/0:30,0:30:51.03:0,51,942	0/0:45,0:45:99:0,126,2126	0/0:36,0:36:77.27:0,77,1452	0/0:20,0:19:41.94:0,42,655	0/0:18,0:14:42.09:0,42,673	0/0:30,0:30:75.91:0,76,1326	0/0:59,0:56:99:0,155,2634	0/0:26,0:26:44.86:0,45,772	0/0:29,0:28:45.11:0,45,765	0/0:44,0:43:42.93:0,43,1093	0/0:27,0:26:60.20:0,60,1132	0/1:13,15:26:45.15:732,0,45	0/0:27,0:27:75.17:0,75,1286	0/0:17,0:17:51.17:0,51,926
chr10	98442670	.	CTG	C	1349.01	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.641;DP=903;FS=5.114;HRun=0;HaplotypeScore=168.6976;InbreedingCoeff=0.9861;MQ=54.21;MQ0=6;MQRankSum=1.704;QD=28.10;ReadPosRankSum=0.504;VQSLOD=4.9233;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:90.27:0,90,1401	0/0:18,0:18:45.13:0,45,692	0/0:39,0:17:35.28:0,35,524	0/0:38,0:15:32.55:0,33,454	0/0:28,0:28:81.28:0,81,1342	0/0:20,0:20:44.53:0,45,709	0/0:31,1:32:40.06:0,40,1158	0/0:48,1:49:76.16:0,76,1723	0/0:36,0:36:85.14:0,85,1437	0/0:43,0:42:99:0,108,1736	0/0:17,0:17:35.99:0,36,555	0/0:29,0:29:72.23:0,72,1148	0/0:32,0:32:84.29:0,84,1385	0/0:25,0:24:60.15:0,60,969	0/0:32,0:32:75.21:0,75,1230	1/1:16,32:48:99:1444,120,0	0/0:38,1:39:27.91:0,28,1122	0/0:20,0:20:39.32:0,39,742	0/0:17,0:16:19.49:0,19,616	0/0:30,0:30:84.29:0,84,1398	0/0:66,0:66:99:0,160,2578	0/0:27,1:28:30.96:0,31,936	0/0:28,0:28:72.25:0,72,1199	0/0:47,1:47:85.19:0,85,1770	0/0:27,0:27:69.18:0,69,1038	0/0:28,0:28:81.23:0,81,969	0/0:26,0:26:66.16:0,66,1077	0/0:19,1:20:19.09:0,19,865
chr10	98442692	.	CTG	C	1153.31	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.711;DP=1016;FS=2.034;HRun=0;HaplotypeScore=167.1724;InbreedingCoeff=0.9991;MQ=54.14;MQ0=10;MQRankSum=-0.371;QD=29.57;ReadPosRankSum=-0.265;VQSLOD=4.3482;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,111,1798	0/0:15,0:15:39.12:0,39,631	0/0:47,0:15:35.71:0,36,548	0/0:55,0:17:33.11:0,33,533	0/0:35,0:35:99:0,102,1618	0/0:22,0:22:54.18:0,54,895	0/0:34,0:33:78.24:0,78,1257	0/0:59,0:58:99:0,132,2113	0/0:44,1:45:99:0,123,2057	0/0:45,0:44:99:0,124,2022	0/0:17,0:17:48.03:0,48,776	0/0:32,0:32:87.28:0,87,1447	0/0:45,0:45:99:0,126,2073	0/0:26,1:27:36.25:0,36,1164	0/0:37,0:37:99:0,108,1773	0/0:47,0:47:99:0,123,1981	0/0:36,0:36:78.13:0,78,1463	0/0:20,0:20:47.39:0,47,826	0/0:19,0:17:35.19:0,35,559	0/0:33,0:33:84.26:0,84,1398	0/0:70,0:69:99:0,151,2438	0/0:28,0:28:69.22:0,69,1146	0/0:32,0:32:90.24:0,90,1404	0/0:54,0:54:99:0,99,1611	0/0:24,0:24:41.47:0,41,899	1/1:9,30:38:57.21:1248,57,0	0/0:32,0:32:85.31:0,85,1466	0/0:21,0:21:39.13:0,39,662
chr10	98442838	.	TTGTG	T	5893.06	PASS	AB=0.537;AC=7;AF=0.125;AN=56;BaseQRankSum=12.463;DP=1155;FS=7.622;HRun=0;HaplotypeScore=206.2439;InbreedingCoeff=0.8163;MQ=53.75;MQ0=27;MQRankSum=-4.612;QD=32.74;ReadPosRankSum=-0.955;VQSLOD=3.8488;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:46:99:0,120,2565	0/0:18,0:18:48.16:0,48,1198	0/0:45,0:14:36.06:0,36,731	0/0:39,0:12:33.11:0,33,508	0/0:35,0:35:93.30:0,93,2257	0/0:19,0:20:50.96:0,51,1141	0/0:34,0:34:90.29:0,90,2109	1/1:15,43:46:96.24:1443,96,0	0/0:48,0:48:99:0,123,2916	0/0:71,0:69:99:0,184,4406	0/0:38,0:38:99:0,102,2263	0/0:35,0:36:99:0,105,2409	0/0:47,0:47:99:0,119,2740	0/0:41,0:41:99:0,111,2656	0/0:53,0:53:99:0,144,3336	0/1:7,44:51:27.66:1492,0,28	0/0:38,0:38:96.20:0,96,2073	0/0:34,0:36:96.27:0,96,2220	0/0:29,0:22:60.15:0,60,1213	0/0:41,0:41:99:0,114,2668	0/0:66,0:62:99:0,159,3593	0/0:48,0:50:99:0,126,2477	0/0:33,0:33:81.24:0,81,1877	0/0:51,0:51:99:0,120,2594	0/0:26,0:26:71.83:0,72,1620	1/1:19,43:61:99:2799,171,0	0/0:31,0:31:87.22:0,87,1839	1/1:4,5:9:9.03:159,9,0
chr10	98442884	.	ATG	A	1474.41	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.696;DP=1113;FS=5.130;HRun=0;HaplotypeScore=174.6950;InbreedingCoeff=0.9996;MQ=56.18;MQ0=3;MQRankSum=-4.615;QD=25.42;ReadPosRankSum=1.332;VQSLOD=4.5263;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,106,1757	0/0:15,0:15:42.13:0,42,677	0/0:33,0:28:60.20:0,60,968	0/0:37,0:28:60.06:0,60,855	0/0:35,0:35:96.29:0,96,1552	0/0:22,0:22:35.20:0,35,830	0/0:32,0:32:87.23:0,87,1344	0/0:53,0:51:99:0,135,1984	0/0:51,0:51:99:0,129,2089	0/0:59,0:59:99:0,168,2612	0/0:34,0:34:84.26:0,84,1390	0/0:40,0:40:99:0,105,1681	0/0:61,0:61:99:0,150,2346	0/0:41,0:41:99:0,108,1731	0/0:46,0:46:99:0,120,1937	0/0:53,0:53:99:0,114,1755	0/0:32,0:32:72.14:0,72,1105	0/0:40,0:40:73.08:0,73,1391	0/0:24,0:23:66.21:0,66,1072	0/0:41,0:41:96.25:0,96,1498	0/0:59,0:59:99:0,153,2458	0/0:49,0:49:99:0,126,2067	0/0:28,0:28:78.25:0,78,1266	0/0:51,0:51:99:0,114,1768	0/0:23,0:23:57.13:0,57,863	1/1:20,38:57:63.27:1569,63,0	0/0:39,0:38:99:0,110,1735	0/0:12,0:12:33.11:0,33,547
chr10	98442988	.	A	ATG	1713.43	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.562;DP=1081;FS=10.528;HRun=0;HaplotypeScore=198.8221;InbreedingCoeff=0.7798;MQ=54.30;MQ0=17;MQRankSum=-2.904;QD=34.27;ReadPosRankSum=-0.419;VQSLOD=3.9092;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:76.91:0,77,1302	0/0:11,0:11:27.08:0,27,334	0/0:59,0:14:0.05:0,0,88	0/0:51,0:20:25.11:0,25,271	0/0:22,0:22:54.64:0,55,687	0/0:29,0:29:73.68:0,74,949	0/0:35,0:35:87.22:0,87,1074	0/0:47,0:43:84.25:0,84,1059	0/0:50,0:50:99:0,123,1525	0/0:48,0:48:99:0,111,1403	0/0:26,0:26:66.21:0,66,838	0/0:41,0:41:99:0,117,1436	0/0:43,0:43:99:0,105,1320	0/0:44,0:44:99:0,126,1602	0/0:60,0:60:99:0,159,1994	1/1:17,33:49:79.17:1808,79,0	0/0:37,0:37:81.26:0,81,1024	0/0:31,0:31:51.84:0,52,724	0/0:20,0:16:45.14:0,45,572	0/0:43,0:43:99:0,100,1216	0/0:78,0:76:99:0,200,2558	0/0:36,0:36:81.71:0,82,1012	0/0:25,0:24:57.17:0,57,712	0/0:50,0:50:99:0,105,1309	0/0:33,0:33:69.32:0,69,1020	0/0:29,0:29:71.43:0,71,902	0/0:29,0:29:78.23:0,78,978	0/0:6,0:6:15.05:0,15,191
chr10	98443022	.	CTG	C	10424.67	PASS	AB=0.758;AC=30;AF=0.536;AN=56;BaseQRankSum=11.936;DP=1057;FS=15.371;HRun=0;HaplotypeScore=230.1742;InbreedingCoeff=0.4898;MQ=50.75;MQ0=13;MQRankSum=1.190;QD=15.15;ReadPosRankSum=3.207;VQSLOD=3.0881;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:43:62.76:335,63,0	0/0:10,0:10:24.08:0,24,380	0/0:38,0:10:16.30:0,16,210	0/0:50,0:20:11.24:0,11,81	0/0:30,0:30:72.25:0,72,1143	1/1:11,18:30:56.99:645,57,0	1/1:18,16:36:37.56:692,38,0	0/1:31,0:49:4.38:201,0,4	1/1:12,32:45:89.64:1170,90,0	0/0:51,2:52:72.48:0,72,1562	0/0:25,1:27:9.76:0,10,729	1/1:13,23:40:86.74:954,87,0	1/1:15,30:45:99:1258,108,0	1/1:20,20:41:78.06:901,78,0	1/1:19,33:55:99:1242,111,0	0/1:10,0:36:58.82:59,0,83	0/1:33,4:37:63.18:63,0,893	0/1:8,0:30:0.71:177,0,1	0/1:14,1:15:11.90:12,0,311	0/0:36,1:37:48.30:0,48,1220	0/0:90,4:94:45.76:0,46,2622	1/1:10,24:38:92.46:1043,92,0	1/1:10,13:25:49.22:556,49,0	1/1:28,25:54:75.60:880,76,0	0/0:30,0:30:41.59:0,42,1088	0/1:13,0:27:10.68:190,0,11	0/1:27,3:30:37.77:38,0,881	0/1:3,0:4:6.71:8,0,7
chr10	98443071	.	C	CTG	10335.91	PASS	AB=0.654;AC=18;AF=0.321;AN=56;BaseQRankSum=-6.682;DP=1077;FS=2.995;HRun=0;HaplotypeScore=228.6407;InbreedingCoeff=0.6666;MQ=57.42;MQ0=19;MQRankSum=-1.133;QD=23.12;ReadPosRankSum=2.857;VQSLOD=5.3884;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:87.08:0,87,1026	0/0:13,0:13:27.08:0,27,326	0/0:49,0:26:35.70:0,36,375	0/0:53,0:31:47.34:0,47,525	0/0:35,0:36:75.04:0,75,869	1/1:5,24:28:51.17:818,51,0	0/1:19,16:35:48.35:732,0,48	0/0:24,0:54:76.04:0,76,366	1/1:15,31:45:48.62:1218,49,0	0/0:46,0:47:99:0,114,1331	0/0:29,0:31:41.69:0,42,884	1/1:14,23:37:24.25:878,24,0	1/1:13,27:40:39.07:1115,39,0	0/1:13,20:33:25.47:669,0,25	0/1:22,30:52:42.32:849,0,42	0/0:7,0:39:61:0,61,303	0/0:31,0:31:31.48:0,31,544	0/0:24,0:24:21.46:0,21,399	0/0:20,0:19:30.08:0,30,348	0/0:32,0:37:83.58:0,84,921	0/0:75,0:75:99:0,138,1617	1/1:18,35:54:42.08:1168,42,0	1/1:9,23:32:59.54:955,60,0	1/1:20,24:43:29.98:917,30,0	0/0:30,0:30:74.97:0,75,880	0/1:23,22:41:58.95:1016,0,59	0/0:27,0:29:68.84:0,69,762	0/0:1,0:8:11.36:0,11,56
chr10	98443178	.	C	CTTCA	2984.34	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.368;DP=944;FS=5.577;HRun=0;HaplotypeScore=149.5397;InbreedingCoeff=0.9218;MQ=67.92;MQ0=4;MQRankSum=1.797;QD=31.09;ReadPosRankSum=0.965;VQSLOD=3.1265;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,18:45:72.69:1588,73,0	0/0:16,0:15:33.11:0,33,518	0/0:29,0:28:15.05:0,15,203	0/0:21,0:18:9.03:0,9,134	0/0:50,0:50:93.27:0,93,1374	0/0:33,0:33:45.15:0,45,699	0/0:31,0:31:66.19:0,66,986	0/0:47,0:47:36.11:0,36,519	0/0:43,0:43:90.30:0,90,1390	0/0:51,0:51:71.93:0,72,1127	0/0:31,0:31:60.20:0,60,940	0/0:35,0:35:66.21:0,66,1011	0/0:47,0:47:72.24:0,72,1115	0/0:32,0:32:51.14:0,51,757	0/0:49,0:49:87.27:0,87,1302	1/1:12,21:34:4.84:1029,5,0	0/0:21,0:21:48.15:0,48,728	1/1:7,7:16:21.07:501,21,0	0/0:17,0:16:18.06:0,18,285	0/0:49,0:49:93.32:0,93,1469	0/0:30,0:30:42.13:0,42,634	0/0:51,0:51:84.28:0,84,1307	0/0:31,0:31:63.21:0,63,970	0/0:26,0:26:36.08:0,36,552	0/0:27,0:27:57.19:0,57,879	0/0:19,0:37:64.32:0,64,571	0/0:25,0:25:42.13:0,42,627	0/0:19,0:19:33.07:0,33,466
chr10	98443745	.	AC	A	1881.25	PASS	AB=0.516;AC=5;AF=0.089;AN=56;BaseQRankSum=2.765;DP=588;FS=6.337;HRun=1;HaplotypeScore=76.4641;InbreedingCoeff=0.8626;MQ=84.58;MQ0=0;MQRankSum=-1.531;QD=36.18;ReadPosRankSum=-1.735;VQSLOD=3.0207;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.27:0,87,1340	0/0:15,0:15:45.15:0,45,719	0/0:20,0:21:46.92:0,47,750	0/0:16,0:16:45.32:0,45,531	0/0:17,0:17:51.17:0,51,810	0/0:20,0:20:57.18:0,57,888	0/0:18,0:18:54.18:0,54,859	1/1:0,28:28:84.28:1175,84,0	0/0:16,0:16:48.15:0,48,743	0/0:34,0:34:99:0,102,1630	0/0:22,0:22:66.19:0,66,1005	0/0:27,0:27:81.28:0,81,1293	0/0:16,0:16:48.16:0,48,760	0/0:18,0:18:54.18:0,54,863	0/0:20,0:20:60.20:0,60,959	0/1:1,15:16:2.79:542,0,3	0/0:18,0:18:50.76:0,51,789	0/0:16,0:16:48.14:0,48,741	0/0:18,0:18:54.17:0,54,838	0/0:33,0:33:99:0,99,1533	0/0:21,0:21:63.21:0,63,1003	0/0:29,0:29:87.30:0,87,1386	0/0:21,0:21:63.19:0,63,974	0/0:18,0:18:54.18:0,54,857	0/0:16,0:16:48.16:0,48,765	0/0:26,0:26:78.27:0,78,1247	0/0:31,0:31:93.32:0,93,1481	1/1:0,8:8:21.07:293,21,0
chr10	98443795	.	G	GT	1062.39	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-2.611;DP=563;FS=1.135;HRun=10;HaplotypeScore=66.5799;InbreedingCoeff=0.9061;MQ=75.04;MQ0=0;MQRankSum=1.095;QD=16.60;ReadPosRankSum=-5.232;VQSLOD=2.5241;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:68.90:0,69,566	0/0:10,0:10:23.95:0,24,197	0/0:9,0:9:0.90:0,1,74	0/0:12,0:13:28.39:0,28,197	0/0:22,0:23:58.96:0,59,474	0/0:30,0:30:74.86:0,75,613	0/0:32,0:32:89.87:0,90,739	1/1:19,22:43:91.54:882,92,0	0/0:17,0:17:44.95:0,45,370	0/0:23,0:23:44.90:0,45,369	0/0:14,0:14:26.96:0,27,221	0/0:18,0:18:44.92:0,45,366	0/0:22,0:22:40.09:0,40,487	0/0:20,1:21:25.06:0,25,412	0/0:12,0:12:32.95:0,33,271	0/0:11,0:11:29.09:0,29,245	0/0:23,0:23:56.92:0,57,468	0/0:11,0:11:23.96:0,24,197	0/0:10,0:10:20.94:0,21,170	0/0:31,0:31:86.88:0,87,711	0/0:23,0:24:70.96:0,71,572	0/0:23,1:25:29.95:0,30,437	0/0:21,0:21:50.92:0,51,418	0/0:21,0:21:59.89:0,60,487	0/0:19,0:19:53.92:0,54,443	1/1:2,0:16:37.09:191,37,0	0/0:32,0:32:64.44:0,64,667	1/1:1,4:5:12.03:128,12,0
chr10	98444813	.	CTG	C	847.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.774;DP=594;FS=0.000;HRun=0;HaplotypeScore=70.9428;InbreedingCoeff=0.9686;MQ=83.69;MQ0=0;MQRankSum=-1.690;QD=40.34;ReadPosRankSum=-0.290;VQSLOD=5.3156;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,2270	0/0:10,0:10:30.10:0,30,579	0/0:17,0:17:27.50:0,28,763	0/0:19,0:19:45.13:0,45,764	0/0:25,0:25:75.22:0,75,1369	0/0:23,0:23:69.21:0,69,1288	0/0:21,0:21:60.17:0,60,1071	0/0:29,0:29:84.29:0,84,1604	0/0:15,0:15:45.15:0,45,868	0/0:17,0:17:42.14:0,42,811	0/0:27,0:27:75.26:0,75,1432	0/0:18,0:18:45.15:0,45,864	0/0:15,0:14:42.14:0,42,810	0/0:12,0:12:33.11:0,33,637	0/0:28,0:28:84.29:0,84,1597	0/0:25,0:25:69.24:0,69,1333	0/0:17,0:17:51.17:0,51,985	0/0:18,0:18:51.17:0,51,971	0/0:18,0:18:54.19:0,54,1027	0/0:23,0:23:69.24:0,69,1323	0/0:29,0:29:87.30:0,87,1639	0/0:32,0:32:90.31:0,90,1738	0/0:14,0:14:42.14:0,42,810	0/0:30,0:30:84.29:0,84,1571	0/0:15,0:15:42.14:0,42,811	1/1:0,21:21:63.20:942,63,0	0/0:32,0:31:96.29:0,96,1779	0/0:4,0:4:12.04:0,12,232
chr10	98444915	.	A	AAGAGAGAGAGAGAG	5647.37	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=1.426;DP=570;FS=1.844;HRun=0;HaplotypeScore=217.0595;InbreedingCoeff=0.5793;MQ=64.54;MQ0=8;MQRankSum=-4.311;QD=14.19;ReadPosRankSum=-3.349;VQSLOD=3.4935;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:12:273,12,0	0/0:15,0:14:36.07:0,36,1063	1/1:31,0:15:1.36:2,1,0	0/1:37,0:20:0:0,0,0	0/0:39,0:41:24.40:0,24,1197	1/1:19,0:19:15:282,15,0	1/1:12,0:11:8.95:238,9,0	1/1:19,0:19:20.81:488,21,0	0/1:9,0:8:0:0,0,0	0/1:31,0:31:12.73:13,0,817	0/0:19,0:20:8.87:0,9,645	1/1:21,0:19:9.03:300,9,0	1/1:15,0:13:14.72:458,15,0	1/1:16,0:15:8.98:74,9,0	1/1:13,1:20:3.01:201,3,0	1/1:14,0:14:18.06:867,18,0	0/1:20,0:20:41.71:42,0,1063	1/1:10,2:19:15.05:751,15,0	0/0:19,0:20:8.26:0,8,664	0/0:26,0:29:27.06:0,27,1067	0/0:20,0:20:5.31:0,5,615	0/1:12,0:12:0:0,0,0	1/1:15,0:14:15:228,15,0	0/1:15,0:14:0:0,0,0	0/1:21,0:23:0.17:0,0,882	1/1:19,0:19:32.60:1348,33,0	0/0:24,0:26:47.78:0,48,1184	1/1:8,0:8:5.98:83,6,0
chr10	98445027	.	CT	C	207.18	PASS	AB=0.754;AC=2;AF=0.036;AN=56;BaseQRankSum=3.704;DP=589;FS=1.183;HRun=1;HaplotypeScore=77.5658;InbreedingCoeff=-0.0382;MQ=58.31;MQ0=4;MQRankSum=-1.334;QD=4.71;ReadPosRankSum=-2.591;VQSLOD=-0.6147;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,14:29:99:251,0,278	0/0:9,0:9:27.07:0,27,396	0/0:24,0:14:40.95:0,41,575	0/0:15,0:10:21.79:0,22,313	0/0:29,0:29:82.52:0,83,1263	0/0:18,0:18:51.17:0,51,802	0/0:18,0:18:45.15:0,45,707	0/0:46,2:48:51.30:0,51,1907	0/0:7,0:7:21.07:0,21,336	0/0:33,0:32:96.32:0,96,1481	0/0:22,0:22:66.22:0,66,1038	0/0:10,0:10:30.10:0,30,467	0/0:14,0:14:42.14:0,42,651	0/0:16,0:16:48.15:0,48,730	0/0:16,0:16:42.14:0,42,667	0/0:17,0:17:15.46:0,15,232	0/0:20,0:19:51.16:0,51,775	0/1:12,3:15:44.66:45,0,465	0/0:12,0:12:36.12:0,36,547	0/0:35,0:35:99:0,102,1559	0/0:17,0:16:45.15:0,45,715	0/0:28,0:28:84.27:0,84,1285	0/0:21,0:21:63.21:0,63,978	0/0:18,0:18:42.14:0,42,623	0/0:37,0:37:99:0,110,1696	0/0:25,0:25:74.38:0,74,1049	0/0:29,0:29:87.27:0,87,1308	0/0:7,0:7:18.06:0,18,281
chr10	98445036	.	T	TATCTATCTATC	1306.16	PASS	AB=0.660;AC=1;AF=0.018;AN=56;BaseQRankSum=-0.929;DP=592;FS=0.000;HRun=0;HaplotypeScore=190.0905;InbreedingCoeff=-0.0282;MQ=56.40;MQ0=2;MQRankSum=-1.109;QD=42.13;ReadPosRankSum=-2.157;VQSLOD=2.9451;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:6.24:0,6,430	0/0:9,0:9:24.08:0,24,445	0/0:23,0:16:42.14:0,42,627	0/0:14,0:9:24.08:0,24,362	0/0:28,0:28:60.19:0,60,1609	0/0:17,0:17:39.13:0,39,1166	0/0:18,0:18:42.14:0,42,1185	0/0:51,0:51:46.91:0,47,1599	0/0:9,0:9:24.08:0,24,746	0/0:30,0:30:84.27:0,84,2033	0/0:22,0:22:51.15:0,51,1277	0/0:9,0:9:24.08:0,24,690	0/0:14,0:14:36.12:0,36,923	0/0:18,0:18:45.15:0,45,1132	0/0:16,0:16:36.12:0,36,1011	0/0:20,0:20:7.75:0,8,131	0/0:19,0:18:25.53:0,26,1065	0/0:15,0:15:11.23:0,11,138	0/0:12,0:12:27.56:0,28,688	0/0:35,0:35:81.28:0,81,1921	0/0:17,0:16:42.14:0,42,1248	0/0:27,0:27:66.23:0,66,1769	0/0:17,0:17:45.15:0,45,1264	0/0:18,0:18:40.69:0,41,846	0/0:36,0:36:96.33:0,96,2654	0/1:15,13:31:99:1381,0,429	0/0:32,0:32:78.25:0,78,1872	0/0:5,0:5:9.03:0,9,155
chr10	98445051	.	C	CT	1434.67	PASS	AB=0.765;AC=7;AF=0.125;AN=56;BaseQRankSum=-4.204;DP=593;FS=3.872;HRun=1;HaplotypeScore=78.5112;InbreedingCoeff=0.1832;MQ=69.82;MQ0=1;MQRankSum=-1.008;QD=10.25;ReadPosRankSum=-3.800;VQSLOD=0.0947;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,5:27:53.87:54,0,459	0/0:9,0:9:27.09:0,27,377	0/0:28,0:24:66.22:0,66,913	0/0:16,0:15:42.14:0,42,580	0/0:26,0:26:75.20:0,75,994	0/0:19,0:19:48.16:0,48,668	0/0:18,0:18:48.14:0,48,649	0/1:16,25:41:99:901,0,105	0/0:11,0:11:30.10:0,30,419	0/0:31,0:31:93.31:0,93,1299	0/0:20,0:20:51.16:0,51,694	0/0:12,0:12:36.09:0,36,469	0/0:18,0:18:48.15:0,48,652	0/0:17,0:17:48.15:0,48,653	0/0:17,0:17:45.14:0,45,610	1/1:0,21:21:23.67:344,24,0	0/0:17,1:17:48.15:0,48,654	0/1:10,4:14:66.15:66,0,250	0/0:11,0:11:29.77:0,30,419	0/0:26,0:26:78.26:0,78,1086	0/0:25,0:25:66.20:0,66,905	0/0:27,0:27:78.26:0,78,1089	0/0:19,0:19:57.19:0,57,795	0/0:20,0:20:44.24:0,44,661	0/0:35,0:35:99:0,102,1364	0/1:30,0:30:48.88:49,0,828	0/0:30,0:30:84.27:0,84,1154	0/1:2,5:7:24.56:157,0,25
chr10	98446436	.	G	GA	1513.62	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.783;DP=587;FS=2.738;HRun=4;HaplotypeScore=75.7238;InbreedingCoeff=0.9992;MQ=68.06;MQ0=1;MQRankSum=-1.357;QD=28.56;ReadPosRankSum=0.926;VQSLOD=3.6021;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:35:90.12:1116,90,0	0/0:11,0:11:33.09:0,33,374	0/0:27,0:23:55.02:0,55,596	0/0:22,0:19:42.75:0,43,505	0/0:25,0:25:63.16:0,63,704	0/0:18,0:17:51.15:0,51,578	0/0:26,0:26:69.19:0,69,782	0/0:25,0:24:56.61:0,57,284	0/0:27,0:27:78.21:0,78,873	0/0:20,0:20:57.16:0,57,647	0/0:11,0:11:30.07:0,30,331	0/0:19,0:19:54.15:0,54,613	0/0:20,0:20:57.06:0,57,628	0/0:18,0:18:54.12:0,54,592	0/0:24,0:24:72.21:0,72,816	0/0:20,0:20:44:0,44,222	0/0:24,0:24:72.21:0,72,816	1/1:3,15:18:42.10:520,42,0	0/0:16,0:16:48.14:0,48,544	0/0:19,0:19:51.15:0,51,578	0/0:24,0:24:69.18:0,69,773	0/0:18,0:18:48.14:0,48,544	0/0:20,0:20:48.13:0,48,544	0/0:26,0:26:75.21:0,75,847	0/0:17,0:17:51.15:0,51,579	0/0:14,0:14:39.11:0,39,442	0/0:32,0:32:84.22:0,84,941	0/0:10,0:9:28.88:0,29,167
chr10	98446734	.	G	GGTGTGT	2258.06	PASS	AB=1.000;AC=29;AF=0.558;AN=52;BaseQRankSum=-1.084;DP=741;FS=7.612;HRun=0;HaplotypeScore=165.2277;InbreedingCoeff=0.6061;MQ=58.54;MQ0=29;MQRankSum=-2.932;QD=6.09;ReadPosRankSum=-1.983;VQSLOD=1.8801;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:48:9.46:0,9,105	0/0:9,0:9:9.03:0,9,154	./.	./.	0/0:17,0:17:9.49:0,9,163	1/1:17,3:23:9.03:225,9,0	1/1:25,0:27:3.48:94,3,0	1/1:20,0:19:4.26:42,4,0	1/1:29,2:33:2.23:76,2,0	0/0:23,0:22:11.35:0,11,147	0/0:15,0:16:10.49:0,10,100	1/1:21,3:27:9.03:196,9,0	1/1:15,0:17:8.80:189,9,0	1/1:23,6:31:5.91:191,6,0	1/1:17,8:28:12.04:374,12,0	0/0:20,0:20:15.52:0,16,300	0/0:17,0:17:5.20:0,5,91	1/1:13,0:13:2.96:19,3,0	0/0:18,0:18:2.87:0,3,27	0/1:23,0:23:15.02:15,0,257	0/0:48,0:52:29.86:0,30,489	1/1:24,0:24:8.45:193,8,0	1/1:19,0:21:3.01:40,3,0	1/1:25,0:41:2.80:39,3,0	0/0:16,0:17:17.97:0,18,298	1/1:21,3:27:32.20:678,32,0	0/0:15,0:14:14.39:0,14,192	1/1:6,0:5:3.01:65,3,0
chr10	98447023	.	GACAAGC	G	354.48	PASS	AB=0.625;AC=1;AF=0.018;AN=56;BaseQRankSum=3.533;DP=507;FS=6.659;HRun=0;HaplotypeScore=116.9585;InbreedingCoeff=-0.0194;MQ=67.07;MQ0=2;MQRankSum=-4.044;QD=35.45;ReadPosRankSum=0.810;VQSLOD=3.2260;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:93.31:0,93,3407	0/0:4,0:4:12.04:0,12,451	0/0:22,0:19:56.98:0,57,1367	0/0:18,0:13:33.07:0,33,732	0/0:13,0:13:36.12:0,36,1334	0/0:22,0:22:66.21:0,66,2368	0/0:27,0:27:75.24:0,75,2706	0/0:28,0:28:84.29:0,84,2993	0/0:15,0:15:42.13:0,42,1490	0/0:10,0:10:30.10:0,30,1072	0/0:13,0:13:39.13:0,39,1466	0/0:23,0:23:66.23:0,66,2458	0/0:21,0:21:63.22:0,63,2354	0/0:20,0:20:60.21:0,60,2161	0/0:17,0:17:42.14:0,42,1534	0/0:23,0:23:57.20:0,57,2054	0/0:27,0:27:81.21:0,81,2778	0/0:19,0:19:36.11:0,36,1239	0/0:20,0:20:60.16:0,60,2045	0/0:9,0:9:27.09:0,27,1014	0/0:30,0:30:87.30:0,87,3245	0/0:10,0:10:30.10:0,30,1128	0/0:16,0:16:48.16:0,48,1710	0/0:16,0:16:42.14:0,42,1579	0/0:13,0:13:39.12:0,39,1372	0/1:3,6:10:99:429,0,312	0/0:21,0:21:63.22:0,63,2368	0/0:8,0:8:24.08:0,24,903
chr10	98447076	.	TTC	T	1709.53	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=4.692;DP=490;FS=0.430;HRun=0;HaplotypeScore=77.0324;InbreedingCoeff=0.6410;MQ=61.19;MQ0=6;MQRankSum=-1.219;QD=10.18;ReadPosRankSum=-4.970;VQSLOD=2.4181;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:33,4:36:82.26:664,82,0	0/0:8,0:8:17.27:0,17,221	0/0:14,0:8:11.02:0,11,164	0/1:9,0:6:12.35:12,0,72	0/0:18,0:18:41.83:0,42,580	0/0:13,0:13:26.28:0,26,294	0/0:16,0:16:32.98:0,33,409	1/1:22,5:27:56.23:634,56,0	0/0:11,0:11:5.75:0,6,154	0/0:17,0:15:38.73:0,39,464	0/0:13,0:13:22.97:0,23,297	0/1:16,0:15:4.03:4,0,171	0/1:13,0:13:0.72:1,0,243	0/0:22,0:22:39:0,39,448	0/0:20,0:20:31.26:0,31,287	1/1:17,2:19:29.39:260,29,0	0/0:23,0:23:65.68:0,66,780	1/1:25,0:23:15.94:92,16,0	0/0:23,0:22:62.48:0,62,713	0/0:15,0:15:7.39:0,7,287	0/0:19,0:19:53.83:0,54,602	0/0:17,0:17:47.72:0,48,480	0/0:16,0:16:35.78:0,36,376	0/0:23,0:23:44.11:0,44,404	0/0:15,0:15:33.35:0,33,457	0/1:15,0:8:47.92:48,0,65	0/0:19,0:19:53.67:0,54,670	1/1:5,2:7:20.72:172,21,0
chr10	98447077	.	TC	T	2378.68	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=3.513;DP=501;FS=1.934;HRun=1;HaplotypeScore=70.7104;InbreedingCoeff=0.6041;MQ=59.69;MQ0=8;MQRankSum=-1.355;QD=13.07;ReadPosRankSum=-4.101;VQSLOD=1.0383;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,14:36:96.51:1014,97,0	0/0:8,0:8:15.01:0,15,165	0/1:14,0:8:6.54:7,0,121	0/1:8,0:5:5.02:5,0,46	0/0:19,0:19:47.72:0,48,471	0/0:12,0:12:32.39:0,32,240	0/0:16,0:16:33.79:0,34,275	1/1:23,4:27:73.35:707,73,0	0/0:11,0:11:9.01:0,9,96	0/0:19,0:17:33.55:0,34,370	0/0:14,0:14:21.28:0,21,225	0/1:16,0:15:0.17:0,0,119	0/1:14,0:14:8.21:8,0,174	0/0:23,0:23:39.70:0,40,289	0/0:20,0:20:30.73:0,31,214	1/1:2,17:19:30.07:364,30,0	0/0:24,0:24:57.56:0,58,595	1/1:3,21:22:17.07:189,17,0	0/0:23,0:21:57.70:0,58,556	0/0:16,0:16:11.30:0,11,252	0/0:20,0:20:54.18:0,54,494	0/0:18,0:18:42.10:0,42,291	0/0:16,0:16:35.29:0,35,281	0/0:23,0:23:41.19:0,41,294	0/0:15,0:15:30.06:0,30,337	0/1:15,0:8:17.53:60,0,18	0/0:22,0:22:52.81:0,53,506	1/1:5,2:7:20.99:205,21,0
chr10	98448144	.	CTCT	C	882.56	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=8.777;DP=506;FS=1.523;HRun=0;HaplotypeScore=70.1203;InbreedingCoeff=0.8368;MQ=50.02;MQ0=25;MQRankSum=-3.535;QD=14.23;ReadPosRankSum=0.793;VQSLOD=3.1950;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:16:6:208,6,0	0/0:12,0:12:33.11:0,33,655	0/0:50,0:9:20.93:0,21,327	0/0:31,0:6:2.86:0,3,170	0/0:29,0:27:80.75:0,81,1523	0/0:18,0:17:45.11:0,45,839	0/0:19,0:18:48.15:0,48,934	1/1:4,9:10:23.95:275,24,0	0/0:18,0:17:27.09:0,27,552	0/0:23,0:21:60.12:0,60,1123	0/0:10,0:9:21.06:0,21,367	0/0:15,0:14:39.13:0,39,806	0/0:9,0:9:15.05:0,15,310	0/0:17,0:17:42.14:0,42,835	0/0:17,0:17:42.14:0,42,845	0/0:9,0:8:9.02:0,9,96	0/0:22,0:20:42.14:0,42,869	1/1:15,0:15:22.29:194,22,0	0/0:14,0:11:21.06:0,21,391	0/0:24,0:22:60.19:0,60,1143	0/0:17,0:17:39.12:0,39,754	0/0:17,0:15:36.12:0,36,720	0/0:11,0:10:27.09:0,27,543	0/0:26,0:24:63.10:0,63,1160	0/0:18,0:18:54.19:0,54,1092	0/1:5,0:5:2.88:5,0,3	0/0:18,0:17:48.16:0,48,963	1/1:3,8:10:24.55:354,25,0
chr10	98448153	.	T	TTCTTCA	253.71	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=3.215;DP=485;FS=5.509;HRun=0;HaplotypeScore=96.4907;InbreedingCoeff=0.3399;MQ=51.34;MQ0=14;MQRankSum=-2.943;QD=7.69;ReadPosRankSum=-0.271;VQSLOD=1.0038;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:0.07:0,0,451	0/0:12,0:12:33.11:0,33,720	0/0:43,0:7:20.93:0,21,319	0/0:27,0:8:14.21:0,14,218	0/0:29,0:27:80.75:0,81,1639	0/0:20,0:19:54.11:0,54,978	0/0:19,0:19:51.13:0,51,996	0/1:13,0:11:31.27:31,0,182	0/0:15,0:14:27.09:0,27,591	0/0:24,0:22:60.10:0,60,1194	0/0:9,0:9:24.05:0,24,419	0/0:13,0:13:39.13:0,39,881	0/0:7,0:7:15.05:0,15,329	0/0:17,0:17:42.14:0,42,901	0/0:18,0:18:45.14:0,45,938	1/1:1,9:9:9.03:314,9,0	0/0:19,0:18:42.14:0,42,933	0/0:12,0:12:15.95:0,16,346	0/0:13,0:9:24.05:0,24,440	0/0:25,0:24:66.18:0,66,1230	0/0:16,0:16:39.12:0,39,801	0/0:16,0:15:42.12:0,42,797	0/0:12,0:12:33.09:0,33,629	0/0:26,0:25:66.57:0,67,1262	0/0:20,0:20:57.18:0,57,1196	0/0:4,0:4:11.83:0,12,99	0/0:17,0:17:51.12:0,51,1026	0/1:10,0:10:14.42:14,0,222
chr10	98448159	.	TTCA	T	1109.66	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=9.293;DP=489;FS=0.632;HRun=0;HaplotypeScore=72.5910;InbreedingCoeff=0.6533;MQ=51.81;MQ0=11;MQRankSum=-4.401;QD=17.61;ReadPosRankSum=1.015;VQSLOD=2.9765;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:27.09:458,27,0	0/0:12,0:12:36.09:0,36,734	0/0:45,0:9:12.67:0,13,291	0/0:28,0:11:12.85:0,13,249	0/0:28,0:27:66.21:0,66,1561	0/0:19,0:19:48.14:0,48,970	0/0:20,0:20:57:0,57,1102	0/1:18,0:15:65.15:65,0,124	0/0:10,0:10:27.09:0,27,571	0/0:26,0:24:69.12:0,69,1349	0/0:9,0:9:3.07:0,3,368	0/0:15,0:15:45.12:0,45,932	0/0:9,0:9:21.04:0,21,392	0/0:15,0:15:42.08:0,42,894	0/0:19,0:19:51.01:0,51,977	0/0:8,0:8:9.03:0,9,149	0/0:21,0:21:51.13:0,51,1027	1/1:4,7:11:27.06:407,27,0	0/0:11,0:9:21.06:0,21,414	0/0:24,0:23:66.06:0,66,1334	0/0:15,0:15:39.09:0,39,802	0/0:16,0:15:42.09:0,42,862	0/0:11,0:11:33.10:0,33,673	0/0:27,0:26:66.09:0,66,1302	0/0:21,0:21:63.14:0,63,1186	1/1:7,0:7:20.76:155,21,0	0/0:17,0:17:51.11:0,51,1091	0/1:10,0:10:12.84:178,0,13
chr10	98448220	.	CCTT	C	621.72	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=2.290;DP=470;FS=0.962;HRun=0;HaplotypeScore=78.3767;InbreedingCoeff=0.3285;MQ=54.60;MQ0=34;MQRankSum=-4.947;QD=27.03;ReadPosRankSum=1.633;VQSLOD=3.5765;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:7:6.02:0,6,98	0/0:11,0:11:33.02:0,33,604	0/0:31,0:9:18.07:0,18,266	0/0:26,0:11:18.06:0,18,407	0/0:24,0:24:63.18:0,63,1312	0/0:16,0:12:21.07:0,21,484	0/0:6,0:6:18.02:0,18,362	0/0:4,0:3:3.01:0,3,68	0/0:8,0:8:18.06:0,18,388	0/0:38,0:36:99:0,100,2025	0/0:18,0:18:48.12:0,48,1030	0/0:10,0:10:27.09:0,27,600	0/0:12,0:12:30.10:0,30,678	0/0:9,0:9:27.08:0,27,562	0/0:13,0:13:39.10:0,39,827	0/0:5,0:5:5.44:0,5,135	0/0:32,0:27:66.23:0,66,1499	0/0:12,0:11:20.98:0,21,424	0/0:13,0:10:27.06:0,27,518	0/0:29,0:28:72.20:0,72,1530	0/0:25,0:20:42.12:0,42,853	0/0:20,0:18:45.14:0,45,965	0/0:11,0:9:27.09:0,27,620	0/0:26,0:23:45.97:0,46,904	0/0:23,0:23:66.70:0,67,1519	1/1:10,6:16:2.57:672,3,0	0/0:14,0:13:36.12:0,36,775	0/1:7,0:5:26.10:41,0,26
chr10	98448228	.	TTTCTTC	T	288.78	PASS	AB=0.970;AC=16;AF=0.348;AN=46;BaseQRankSum=-0.359;DP=519;FS=0.000;HRun=0;HaplotypeScore=102.7206;InbreedingCoeff=0.1063;MQ=47.56;MQ0=80;MQRankSum=1.680;QD=1.27;ReadPosRankSum=2.549;VQSLOD=0.9900;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:8:5.98:0,6,69	0/0:10,0:9:6.01:0,6,63	./.	./.	0/1:24,0:22:12.51:13,0,22	0/0:19,0:12:5.85:0,6,61	./.	./.	1/1:12,0:9:2.99:23,3,0	0/0:38,0:33:27.72:0,28,219	0/0:19,0:18:10.83:0,11,96	./.	0/0:12,0:11:2.89:0,3,34	1/1:12,0:8:3.01:38,3,0	0/0:14,0:12:3.01:0,3,32	0/0:7,0:5:3.01:0,3,34	0/1:40,0:29:14.43:34,0,14	0/1:17,0:13:11.47:11,0,73	1/1:11,0:6:3.01:54,3,0	0/1:25,7:29:13.97:34,0,14	1/1:23,0:17:6.02:103,6,0	0/1:20,0:15:0:0,0,0	0/0:17,0:10:3.01:0,3,40	0/0:28,0:21:0.07:0,0,1	0/0:26,0:25:4.04:0,4,29	1/1:20,0:17:1.45:47,1,0	0/1:16,0:15:34.74:61,0,35	0/0:11,0:7:1.99:0,2,37
chr10	98448504	.	CCTT	C	1645.24	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=4.209;DP=534;FS=39.919;HRun=0;HaplotypeScore=96.9427;InbreedingCoeff=0.4329;MQ=61.75;MQ0=7;MQRankSum=-2.240;QD=13.60;ReadPosRankSum=2.275;VQSLOD=1.5666;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:48.16:750,48,0	0/0:9,0:9:27.09:0,27,557	0/0:26,0:12:23.84:0,24,390	0/0:45,0:19:28.92:0,29,506	0/0:26,0:26:69.14:0,69,1294	0/1:16,0:15:3.26:22,0,3	0/0:25,0:25:1.66:0,2,98	0/0:17,0:16:30.07:0,30,485	0/0:26,0:26:23.23:0,23,173	0/0:16,0:16:36.12:0,36,774	0/0:21,0:21:63.22:0,63,1354	0/1:12,0:12:12.40:12,0,31	0/1:21,0:20:9.17:9,0,66	0/0:10,0:10:0.25:0,0,72	0/0:18,0:18:20.28:0,20,212	0/0:13,0:12:30.09:0,30,581	0/0:20,0:21:63.04:0,63,1251	1/1:18,16:33:23.49:987,23,0	0/0:10,0:10:30.09:0,30,601	0/0:20,0:20:51.12:0,51,948	0/0:13,0:12:36.06:0,36,717	0/1:15,0:15:3.93:4,0,63	0/0:19,0:19:26.28:0,26,246	0/0:26,0:24:16.34:0,16,153	0/0:18,0:18:51.17:0,51,1053	0/0:17,0:17:45.15:0,45,978	0/0:13,0:12:36.12:0,36,750	0/0:4,0:4:12.04:0,12,260
chr10	98448514	.	TTTC	T	5447.28	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=8.340;DP=564;FS=10.239;HRun=0;HaplotypeScore=88.9455;InbreedingCoeff=0.9448;MQ=64.31;MQ0=8;MQRankSum=-0.652;QD=25.82;ReadPosRankSum=4.995;VQSLOD=4.0611;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:2.02:2,0,70	0/0:10,0:10:27.08:0,27,515	0/0:25,0:12:18.01:0,18,266	0/0:45,0:23:40.28:0,40,653	0/0:25,0:25:63.20:0,63,1286	1/1:1,18:18:30.10:466,30,0	1/1:2,21:23:42.14:646,42,0	0/0:17,0:16:27.09:0,27,496	1/1:1,22:23:48.16:736,48,0	0/0:21,0:21:54.18:0,54,1049	0/0:26,0:26:75.19:0,75,1450	1/1:0,12:12:24.08:373,24,0	1/1:2,22:23:33.08:512,33,0	1/1:1,10:11:18.06:279,18,0	1/1:3,17:20:30.10:438,30,0	0/0:16,0:15:39.13:0,39,788	0/0:25,0:25:65.80:0,66,1217	0/0:32,0:32:23.83:0,24,244	0/0:13,0:13:36.12:0,36,739	0/0:24,0:24:60.19:0,60,1101	0/0:14,0:14:36.11:0,36,697	1/1:1,15:16:39.05:572,39,0	1/1:8,10:18:45.13:643,45,0	1/1:4,19:22:51.17:781,51,0	0/0:20,0:20:51.16:0,51,1006	0/0:17,0:17:51.17:0,51,1017	0/0:19,0:18:48.14:0,48,859	0/0:4,0:4:12.04:0,12,258
chr10	98449060	.	GTAAAA	G	399.64	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.839;DP=553;FS=27.335;HRun=0;HaplotypeScore=120.5257;InbreedingCoeff=0.9724;MQ=71.47;MQ0=3;MQRankSum=-3.964;QD=44.40;ReadPosRankSum=1.437;VQSLOD=1.9213;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:63.01:0,63,1251	0/0:6,0:6:17.98:0,18,325	0/0:25,0:13:29.23:0,29,516	0/0:18,0:11:26.83:0,27,253	0/0:39,0:39:99:0,114,2799	0/0:19,0:19:48.15:0,48,929	0/0:13,0:13:39.09:0,39,699	0/0:20,0:20:60.11:0,60,1009	0/0:19,0:19:45.12:0,45,753	0/0:27,0:27:81.19:0,81,1523	0/0:18,0:18:51.15:0,51,1215	0/0:12,0:12:30.08:0,30,543	0/0:11,0:11:30.09:0,30,508	0/0:14,0:14:35.75:0,36,656	0/0:15,0:15:35.12:0,35,475	0/0:23,0:23:66.14:0,66,1463	0/0:16,0:16:48.03:0,48,1088	0/0:17,0:16:45.06:0,45,924	0/0:13,0:12:35.93:0,36,645	0/0:37,0:37:99:0,108,2299	0/0:6,0:6:15.02:0,15,269	0/0:39,0:39:99:0,114,2012	0/0:20,0:20:48.15:0,48,931	0/0:20,0:20:50.79:0,51,984	0/0:32,0:32:93.27:0,93,2185	1/1:2,7:9:26.91:494,27,0	0/0:27,0:27:81.07:0,81,1807	0/0:15,0:15:42.13:0,42,958
chr10	98449061	.	TA	T	1613.97	PASS	AB=0.873;AC=25;AF=0.446;AN=56;BaseQRankSum=4.548;DP=578;FS=3.484;HRun=15;HaplotypeScore=86.2870;InbreedingCoeff=0.5511;MQ=67.34;MQ0=3;MQRankSum=2.679;QD=5.70;ReadPosRankSum=4.447;VQSLOD=2.9912;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:33:0,33,339	0/1:7,0:7:10.26:10,0,44	0/0:22,0:11:2.18:0,2,81	0/0:17,0:9:0:0,0,0	0/1:34,3:41:0.83:1,0,508	1/1:4,14:19:31.49:198,31,0	0/1:7,5:14:25.04:95,0,25	0/0:17,0:22:35.26:0,35,181	1/1:7,9:20:5.14:115,5,0	0/0:26,2:28:19.59:0,20,281	0/1:17,2:19:11.25:11,0,237	1/1:4,8:12:19.53:120,20,0	1/1:8,3:13:15.41:80,15,0	1/1:5,10:15:25.95:172,26,0	1/1:3,0:15:17.94:52,18,0	0/0:21,2:23:9.78:0,10,304	0/0:17,1:18:19.77:0,20,289	0/1:14,2:17:14.46:14,0,146	0/0:12,1:12:1.66:0,2,129	0/0:34,4:40:10.67:0,11,424	0/0:5,0:5:5.99:0,6,50	1/1:8,30:38:69.58:447,70,0	1/1:3,17:21:40.29:255,40,0	1/1:7,13:21:12.02:194,12,0	0/0:29,2:33:33.58:0,34,488	1/1:9,0:9:14.25:43,14,0	0/0:29,1:30:44.08:0,44,468	0/0:6,0:15:30.10:0,30,153
chr10	98449078	.	A	AAAAG	2773.13	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=9.756;DP=619;FS=7.768;HRun=0;HaplotypeScore=130.7601;InbreedingCoeff=0.8819;MQ=55.34;MQ0=6;MQRankSum=-8.963;QD=19.53;ReadPosRankSum=-1.220;VQSLOD=2.7967;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,7:28:46.01:823,46,0	0/0:7,0:7:15.05:0,15,236	0/1:26,0:10:3.55:4,0,203	0/0:18,0:5:9.03:0,9,125	0/0:45,0:45:90.01:0,90,1302	0/0:22,0:22:45.14:0,45,707	0/0:23,0:23:45.13:0,45,672	1/1:31,0:31:25.69:567,26,0	0/0:21,0:21:42.13:0,42,662	0/0:20,0:20:45.14:0,45,687	0/0:20,0:20:36.12:0,36,587	0/0:16,0:16:27.07:0,27,387	0/0:14,0:14:30.08:0,30,436	0/0:19,0:19:45.11:0,45,679	0/0:21,0:21:45.14:0,45,672	1/1:21,3:24:13.13:674,13,0	0/0:19,0:19:18.20:0,18,448	1/1:15,4:17:24.08:462,24,0	0/0:17,0:16:18.05:0,18,264	0/0:30,0:30:54.17:0,54,853	0/0:3,0:3:9.03:0,9,148	0/0:33,0:33:69.22:0,69,1088	0/0:24,0:24:39.13:0,39,599	0/0:27,0:26:33.19:0,33,745	0/0:30,0:30:63.20:0,63,1002	0/0:12,0:12:30.01:0,30,181	0/0:35,0:34:54.18:0,54,852	1/1:9,4:13:24.05:418,24,0
chr10	98449098	.	G	GA	713.44	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=13.409;DP=596;FS=8.661;HRun=3;HaplotypeScore=95.1830;InbreedingCoeff=0.5167;MQ=55.57;MQ0=4;MQRankSum=-13.171;QD=4.57;ReadPosRankSum=0.837;VQSLOD=-0.0747;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:30.83:168,31,0	0/0:6,0:6:15.05:0,15,186	0/1:22,0:11:5.85:6,0,200	0/0:22,0:11:17.30:0,17,279	0/0:37,0:37:99:0,99,1202	0/0:21,0:21:54.14:0,54,638	0/0:20,0:20:60.19:0,60,744	1/1:34,0:34:4.81:181,5,0	0/0:23,0:23:57.16:0,57,689	0/0:20,0:20:57.18:0,57,706	0/0:17,0:17:48.15:0,48,595	0/0:16,0:16:39.12:0,39,483	0/0:13,0:13:36.10:0,36,433	0/0:22,0:22:60.15:0,60,726	0/0:22,0:22:63.18:0,63,756	0/1:25,0:25:54.48:121,0,54	0/0:21,1:22:0.34:0,0,642	0/1:19,0:17:7.79:31,0,8	0/0:22,0:22:51.14:0,51,619	0/0:24,0:24:72.23:0,72,892	0/0:4,0:4:12.04:0,12,149	0/0:27,0:27:81.24:0,81,990	0/0:21,0:21:63.20:0,63,780	0/0:24,0:24:35.61:0,36,700	0/0:33,0:33:93.29:0,93,1152	1/1:20,3:23:30.89:314,31,0	0/0:24,0:23:72.23:0,72,892	0/1:10,0:10:3.01:45,0,3
chr10	98449099	.	AAGG	A	1569.40	PASS	AB=0.991;AC=9;AF=0.161;AN=56;BaseQRankSum=9.960;DP=595;FS=15.786;HRun=0;HaplotypeScore=113.4546;InbreedingCoeff=0.3280;MQ=55.57;MQ0=4;MQRankSum=-7.977;QD=10.00;ReadPosRankSum=-5.783;VQSLOD=0.3957;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:85.71:176,0,86	0/0:6,0:6:18.04:0,18,378	0/1:21,1:11:27.33:27,0,397	0/0:22,0:11:12.26:0,12,460	0/0:36,0:36:99:0,102,2179	0/0:21,0:21:54.18:0,54,1200	0/0:20,0:20:60.21:0,60,1367	1/1:34,0:34:35.83:375,36,0	0/0:23,0:23:57.20:0,57,1256	0/0:20,0:20:60.19:0,60,1301	0/0:17,0:17:48.16:0,48,1122	0/0:16,0:16:42.13:0,42,901	0/0:13,0:13:36.11:0,36,774	0/0:22,0:22:60.16:0,60,1306	0/0:22,0:22:66.20:0,66,1425	0/1:25,0:25:99:207,0,119	0/0:22,0:22:39.69:0,40,1283	0/1:18,0:17:49.94:117,0,50	0/0:21,0:21:51.16:0,51,1041	0/0:24,0:24:72.24:0,72,1587	0/0:4,0:4:12.04:0,12,283	0/0:27,0:27:81.26:0,81,1819	0/0:21,0:21:63.22:0,63,1392	0/0:24,0:24:20.21:0,20,1275	0/0:33,0:33:96.04:0,96,2036	1/1:15,8:23:68.42:787,68,0	0/0:24,0:23:72.25:0,72,1622	0/1:10,0:10:33:33,0,82
chr10	98449102	.	G	GA	4202.66	PASS	AB=0.803;AC=12;AF=0.214;AN=56;BaseQRankSum=6.767;DP=606;FS=18.002;HRun=2;HaplotypeScore=85.6955;InbreedingCoeff=0.8058;MQ=56.70;MQ0=3;MQRankSum=-11.245;QD=26.27;ReadPosRankSum=-2.155;VQSLOD=1.8108;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,18:23:60.11:744,60,0	0/0:6,0:6:18.06:0,18,223	0/1:24,0:12:23.57:24,0,208	0/0:22,1:13:27.17:0,27,324	0/0:37,0:37:99:0,99,1210	0/0:22,0:22:60.14:0,60,702	0/0:22,0:22:66.18:0,66,792	1/1:9,28:37:89.96:1157,90,0	0/0:24,0:24:60.16:0,60,719	0/0:20,0:20:57.18:0,57,706	0/0:17,0:17:48.15:0,48,595	0/0:16,0:16:42.13:0,42,520	0/0:12,0:12:33.10:0,33,409	0/0:22,0:22:57.18:0,57,704	0/0:21,0:21:63.20:0,63,780	0/1:8,15:23:2.13:606,0,2	0/0:23,0:23:58.86:0,59,715	1/1:4,14:16:7.41:509,7,0	0/0:20,0:20:54.16:0,54,658	0/0:24,0:24:69.22:0,69,855	0/0:4,0:4:12.04:0,12,149	0/0:27,0:27:81.24:0,81,990	0/0:23,0:23:66.19:0,66,800	0/0:22,1:23:17.27:0,17,658	0/0:33,0:33:93.12:0,93,1128	1/1:11,13:24:68.54:770,69,0	0/0:26,0:25:78.10:0,78,931	1/1:1,10:11:30.08:392,30,0
chr10	98449104	.	A	AG	2059.91	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.603;DP=610;FS=17.079;HRun=1;HaplotypeScore=91.4681;InbreedingCoeff=0.9627;MQ=56.72;MQ0=2;MQRankSum=-11.302;QD=15.04;ReadPosRankSum=-1.095;VQSLOD=2.0319;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,4:24:40.80:514,41,0	0/0:6,0:6:18.06:0,18,234	0/0:23,0:12:13.95:0,14,251	0/0:25,0:14:30.96:0,31,372	0/0:36,0:36:99:0,105,1307	0/0:21,0:21:57.18:0,57,739	0/0:23,0:23:66.20:0,66,842	1/1:32,6:38:30.51:668,31,0	0/0:25,0:25:57.18:0,57,739	0/0:20,0:20:57.19:0,57,740	0/0:17,0:17:48.15:0,48,612	0/0:17,0:17:42.14:0,42,545	0/0:12,0:12:33.11:0,33,428	0/0:22,0:22:60.16:0,60,749	0/0:21,0:21:63.20:0,63,817	1/1:19,3:22:17.07:369,17,0	0/0:24,0:24:63.16:0,63,791	1/1:17,1:16:6.11:252,6,0	0/0:21,0:21:57.18:0,57,723	0/0:23,0:23:69.22:0,69,896	0/0:4,0:4:12.04:0,12,155	0/0:27,0:27:81.24:0,81,1022	0/0:23,0:23:69.16:0,69,861	0/0:23,0:23:36.14:0,36,694	0/0:33,0:33:93.27:0,93,1187	1/1:24,0:24:17.72:229,18,0	0/0:26,0:25:78.25:0,78,1007	1/1:10,1:11:29.45:210,29,0
chr10	98450208	.	GAGGTAAGACT	G	4339.28	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.805;DP=698;FS=7.726;HRun=0;HaplotypeScore=202.2600;InbreedingCoeff=0.9887;MQ=88.72;MQ0=0;MQRankSum=-8.581;QD=86.79;ReadPosRankSum=-0.975;VQSLOD=3.5285;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,5229	0/0:11,0:11:30.10:0,30,1603	0/0:26,0:26:78.23:0,78,3793	0/0:26,0:26:78.27:0,78,3413	0/0:22,0:22:66.23:0,66,3430	0/0:29,0:29:87.30:0,87,4389	0/0:22,0:22:66.23:0,66,3411	1/1:3,27:30:81.25:2405,81,0	0/0:21,0:21:63.22:0,63,3033	0/0:27,0:27:78.27:0,78,4032	0/0:25,0:25:75.26:0,75,3716	0/0:22,0:22:63.20:0,63,3161	0/0:29,0:29:87.30:0,87,4370	0/0:17,0:17:51.18:0,51,2609	0/0:39,0:39:99:0,117,6009	1/1:0,16:16:45.15:1527,45,0	0/0:29,0:29:87.30:0,87,4471	0/0:18,0:18:51.14:0,51,2566	0/0:21,0:21:63.22:0,63,3205	0/0:36,0:36:99:0,105,5609	0/0:31,0:31:93.32:0,93,5018	0/0:32,0:32:93.32:0,93,4762	0/0:20,0:20:60.21:0,60,2984	0/0:22,0:22:63.17:0,63,3151	0/0:27,0:27:81.28:0,81,3866	0/0:28,0:28:81.28:0,81,4154	0/0:31,0:31:90.26:0,90,4515	1/1:0,4:4:12.04:407,12,0
chr10	98450545	.	GACACACAT	G	1860.44	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.999;DP=776;FS=1.614;HRun=0;HaplotypeScore=188.9644;InbreedingCoeff=0.9937;MQ=72.88;MQ0=1;MQRankSum=-7.959;QD=43.27;ReadPosRankSum=0.571;VQSLOD=3.4168;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:31:54.19:1412,54,0	0/0:16,0:16:48.16:0,48,1985	0/0:30,0:28:35.37:0,35,2273	0/0:29,0:27:66.23:0,66,2353	0/0:28,0:28:75.26:0,75,3150	0/0:29,0:29:78.27:0,78,3283	0/0:29,0:29:69.24:0,69,2900	0/0:35,0:35:93.31:0,93,3777	0/0:30,0:30:84.29:0,84,3578	0/0:37,0:37:99:0,108,4473	0/0:23,0:22:60.21:0,60,2477	0/0:22,0:22:63.22:0,63,2662	0/0:27,0:27:75.26:0,75,3127	0/0:25,0:25:66.23:0,66,2790	0/0:34,0:34:90.31:0,90,3720	0/0:28,0:28:81.28:0,81,3487	0/0:34,0:34:87.30:0,87,3729	1/1:2,9:11:21.07:569,21,0	0/0:26,0:26:69.24:0,69,2930	0/0:28,0:28:78.25:0,78,3092	0/0:34,0:34:90.31:0,90,3861	0/0:31,0:31:81.25:0,81,3175	0/0:29,0:29:81.28:0,81,3378	0/0:30,0:30:78.22:0,78,3213	0/0:21,0:21:48.16:0,48,1966	0/0:33,0:33:99:0,99,4232	0/0:37,0:37:99:0,105,4369	0/0:8,0:8:18.06:0,18,776
chr10	98451269	.	TAAAGG	T	11793.10	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=15.266;DP=677;FS=9.459;HRun=0;HaplotypeScore=139.9385;InbreedingCoeff=0.9850;MQ=92.73;MQ0=2;MQRankSum=-11.771;QD=45.36;ReadPosRankSum=2.309;VQSLOD=4.9760;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,123,3749	0/0:9,0:9:24.08:0,24,744	0/0:34,0:34:84.19:0,84,2089	0/0:30,0:30:84.15:0,84,2121	0/0:24,0:24:69.24:0,69,1977	1/1:1,16:17:36.06:709,36,0	1/1:4,18:22:30.99:630,31,0	1/1:3,22:25:66.08:1138,66,0	1/1:0,18:18:42.14:879,42,0	0/0:26,0:26:75.26:0,75,2295	0/0:21,0:21:57.20:0,57,1732	1/1:1,20:21:51.18:1068,51,0	1/1:2,12:14:24.08:503,24,0	1/1:1,24:25:60.21:1257,60,0	1/1:1,29:30:75.26:1559,75,0	1/1:5,13:16:36.12:753,36,0	0/0:36,0:36:99:0,102,3135	0/0:30,0:30:81.28:0,81,2511	0/0:23,0:23:66.23:0,66,1924	0/0:30,0:30:90.31:0,90,2771	0/0:29,0:29:81.28:0,81,2481	1/1:0,19:19:48.08:961,48,0	1/1:1,24:25:54.12:1087,54,0	1/1:2,22:24:54.19:1132,54,0	0/0:27,0:27:78.27:0,78,2265	0/0:29,0:29:81.28:0,81,2418	0/0:24,0:24:69.24:0,69,2093	1/1:2,0:2:6.02:118,6,0
chr10	98451412	.	GACCAGGGT	G	16207.84	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=15.187;DP=545;FS=20.739;HRun=0;HaplotypeScore=153.3042;InbreedingCoeff=0.9941;MQ=81.91;MQ0=0;MQRankSum=-17.129;QD=66.43;ReadPosRankSum=2.259;VQSLOD=3.6233;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,5926	0/0:7,0:7:21.07:0,21,954	0/0:19,0:19:53.40:0,53,1791	0/0:21,0:21:56.44:0,56,1521	0/0:9,0:9:24.08:0,24,1100	1/1:0,23:23:60.20:1748,60,0	1/1:0,19:19:27.09:797,27,0	1/1:0,17:17:51.17:1350,51,0	1/1:0,20:20:39.13:1179,39,0	0/0:25,0:25:75.26:0,75,3376	0/0:18,0:18:54.17:0,54,2210	1/1:0,23:24:69.24:2041,69,0	1/1:0,18:19:48.16:1439,48,0	1/1:0,10:10:21.07:635,21,0	1/1:0,25:25:66.23:1942,66,0	1/1:0,22:22:51.18:1541,51,0	0/0:15,0:15:45.15:0,45,2071	0/0:19,0:19:57.20:0,57,2591	0/0:21,0:21:63.21:0,63,2611	0/0:12,0:12:36.11:0,36,1473	0/0:44,0:44:99:0,126,5545	1/1:0,21:21:39.13:1176,39,0	1/1:0,23:23:41.86:1216,42,0	1/1:0,17:17:30.53:780,31,0	0/0:13,0:13:39.13:0,39,1760	0/0:14,0:14:39.13:0,39,1694	0/0:18,0:18:54.19:0,54,2336	1/1:0,4:4:12.04:363,12,0
chr10	98452364	.	C	CTTAG	15757.04	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=5.657;DP=657;FS=0.981;HRun=0;HaplotypeScore=132.9289;InbreedingCoeff=0.9757;MQ=78.68;MQ0=0;MQRankSum=-16.007;QD=58.36;ReadPosRankSum=-2.954;VQSLOD=5.6552;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,2108	0/0:10,0:10:30.10:0,30,560	0/0:26,0:27:27.47:0,27,1064	0/0:15,0:16:29.82:0,30,647	0/0:16,0:16:42.14:0,42,766	1/1:3,24:26:69.16:1562,69,0	1/1:8,21:29:78.11:1748,78,0	1/1:7,16:23:63.22:1608,63,0	1/1:3,13:16:45.11:1064,45,0	0/0:45,0:45:99:0,126,2326	0/0:19,0:19:57.15:0,57,1028	1/1:3,13:16:42.14:1065,42,0	1/1:1,14:15:42.14:1094,42,0	1/1:6,15:21:60.16:1391,60,0	1/1:5,13:17:39.13:968,39,0	1/1:4,19:23:57.20:1481,57,0	0/0:27,0:27:78.25:0,78,1423	0/0:30,0:30:78.27:0,78,1427	0/0:27,0:27:78.27:0,78,1439	0/0:26,0:26:78.27:0,78,1448	0/0:26,0:26:63.22:0,63,1176	1/1:3,28:32:84.02:1810,84,0	1/1:3,23:27:56.99:1146,57,0	1/1:6,15:20:36.04:739,36,0	0/0:19,0:19:54.19:0,54,997	0/0:31,0:31:81.27:0,81,1482	0/0:28,0:28:84.29:0,84,1534	1/1:1,1:2:3.01:80,3,0
chr10	98453998	.	TC	T	5122.51	PASS	AB=0.805;AC=27;AF=0.482;AN=56;BaseQRankSum=11.960;DP=520;FS=29.442;HRun=10;HaplotypeScore=74.6070;InbreedingCoeff=0.8373;MQ=72.05;MQ0=0;MQRankSum=-1.915;QD=17.79;ReadPosRankSum=5.063;VQSLOD=3.6267;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:50.10:0,50,500	0/1:9,1:10:1.96:2,0,197	0/0:14,0:13:14.30:0,14,256	0/0:11,0:11:23.25:0,23,214	0/0:16,0:16:41.98:0,42,420	1/1:1,28:29:71.99:625,72,0	1/1:2,14:16:32.99:286,33,0	1/1:9,18:27:50.63:442,51,0	0/1:3,10:13:4.34:181,0,4	0/0:23,0:23:28.05:0,28,509	0/0:14,0:15:32.91:0,33,337	1/1:3,13:16:38.99:338,39,0	1/1:1,19:20:53.99:469,54,0	1/1:2,19:21:47.98:416,48,0	1/1:3,20:23:50.99:442,51,0	1/1:1,23:24:59.99:521,60,0	0/0:25,0:25:45.63:0,46,674	0/0:15,0:15:45.04:0,45,481	0/1:14,1:16:6.33:6,0,369	0/0:16,0:15:39.04:0,39,410	0/0:26,0:26:60.05:0,60,630	1/1:5,13:18:13.35:273,13,0	1/1:2,16:18:44.99:390,45,0	1/1:5,26:31:68.97:599,69,0	0/0:12,0:12:33.09:0,33,363	0/0:13,0:18:41.15:0,41,305	0/0:22,0:22:51.60:0,52,557	1/1:1,5:6:15:130,15,0
chr10	98454379	.	AAC	A	149.06	PASS	AB=0.899;AC=12;AF=0.240;AN=50;BaseQRankSum=5.098;DP=448;FS=0.994;HRun=0;HaplotypeScore=69.1597;InbreedingCoeff=-0.0290;MQ=67.29;MQ0=4;MQRankSum=-2.306;QD=0.79;ReadPosRankSum=3.256;VQSLOD=1.3780;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:33:15.80:70,16,0	0/0:6,0:6:3.01:0,3,33	./.	./.	0/0:9,0:9:3.01:0,3,44	0/1:13,1:14:22.78:23,0,79	0/1:19,3:22:19.79:20,0,99	0/0:18,0:17:0:0,0,0	0/0:12,0:12:8.99:0,9,91	0/1:17,0:16:16.61:17,0,123	0/0:4,0:4:3.01:0,3,30	0/0:11,0:11:6.02:0,6,86	0/1:12,2:14:22.80:23,0,43	0/0:10,0:10:5.98:0,6,56	0/0:12,0:12:9.03:0,9,131	1/1:6,0:10:11.36:56,11,0	0/0:13,0:13:5.97:0,6,63	0/0:12,0:12:2.92:0,3,17	0/0:16,0:16:11.96:0,12,112	./.	0/0:33,0:33:10.68:0,11,109	0/0:14,2:15:8.99:0,9,108	0/1:11,2:13:25.79:26,0,38	0/1:26,4:30:7.86:8,0,187	0/1:15,2:17:13.86:14,0,116	0/0:18,0:17:1.25:0,1,3	0/1:16,3:19:32.29:32,0,148	0/0:4,0:4:3.01:0,3,42
chr10	98455261	.	TTG	T	201.89	PASS	AB=0.972;AC=16;AF=0.308;AN=52;BaseQRankSum=1.588;DP=701;FS=9.647;HRun=0;HaplotypeScore=98.9238;InbreedingCoeff=-0.2636;MQ=72.34;MQ0=18;MQRankSum=0.699;QD=0.53;ReadPosRankSum=0.965;VQSLOD=0.5389;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:2.99:0,3,23	0/0:6,0:5:3.22:0,3,13	./.	./.	0/1:17,0:17:22.71:23,0,61	0/0:15,0:16:9.29:0,9,113	0/0:34,0:30:21.61:0,22,306	0/0:28,0:26:5.58:0,6,21	0/1:24,0:24:42.50:43,0,159	0/1:33,1:31:37.91:38,0,149	0/1:10,1:9:21.40:21,0,82	0/1:31,1:31:49.14:49,0,398	1/1:20,0:17:1.19:3,1,0	0/1:32,1:31:23.13:23,0,233	0/0:21,0:20:7.30:0,7,186	0/1:22,0:22:11.49:11,0,28	0/1:24,4:27:37.25:37,0,258	0/1:29,0:27:14.37:14,0,305	0/0:26,0:24:6.49:0,6,85	0/1:11,0:10:3.88:4,0,66	0/1:69,3:68:27:27,0,259	0/1:20,0:18:7.96:8,0,139	0/0:13,0:12:3.47:0,3,26	0/0:25,2:25:3.53:0,4,391	0/0:20,0:18:3.01:0,3,44	1/1:30,0:28:5.28:39,5,0	0/0:22,0:22:24.05:0,24,298	0/0:12,0:10:7.50:0,8,52
chr10	98455309	.	GTC	G	1136.65	PASS	AB=1.000;AC=16;AF=0.308;AN=52;BaseQRankSum=5.815;DP=709;FS=19.694;HRun=0;HaplotypeScore=116.3092;InbreedingCoeff=0.1019;MQ=47.07;MQ0=63;MQRankSum=2.168;QD=3.17;ReadPosRankSum=-2.398;VQSLOD=0.8124;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:32:44.51:334,45,0	0/1:12,0:9:14.47:14,0,84	./.	./.	0/0:15,0:13:2.88:0,3,101	0/1:21,0:20:1.91:2,0,230	0/0:46,1:33:21.62:0,22,533	0/0:27,0:24:55.26:0,55,377	0/0:25,0:22:20:0,20,410	0/0:29,0:25:5.21:0,5,428	0/1:20,0:17:18.48:18,0,266	0/0:30,0:27:17.36:0,17,439	0/1:26,0:20:14.91:15,0,265	0/1:32,0:29:15.50:15,0,422	0/0:25,1:26:7.64:0,8,398	1/1:17,0:16:16.79:205,17,0	0/0:26,0:24:30.84:0,31,473	0/1:30,0:26:99:233,0,340	0/0:19,0:15:14.03:0,14,268	0/0:20,0:19:12.46:0,12,222	0/1:87,0:76:90.67:91,0,591	0/1:27,0:23:5.45:5,0,264	0/1:12,0:10:4.99:5,0,106	0/0:47,0:45:41.52:0,42,926	0/0:22,0:19:26.66:0,27,237	1/1:8,20:23:22.74:343,23,0	0/0:17,0:16:37.09:0,37,391	0/1:10,0:8:17.12:17,0,48
chr10	98456570	.	GC	G	1255.14	PASS	AB=0.517;AC=3;AF=0.054;AN=56;BaseQRankSum=6.949;DP=659;FS=1.376;HRun=1;HaplotypeScore=64.3830;InbreedingCoeff=0.7747;MQ=83.63;MQ0=0;MQRankSum=-2.045;QD=33.03;ReadPosRankSum=2.345;VQSLOD=3.4633;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,172,2683	0/0:5,0:5:15.05:0,15,240	0/0:18,0:18:48.01:0,48,625	0/0:23,0:23:50.87:0,51,688	0/0:12,0:12:33.04:0,33,526	0/0:21,0:21:57.17:0,57,863	0/0:26,0:26:78.24:0,78,1195	0/0:31,0:31:93.30:0,93,1442	0/0:23,0:23:66.23:0,66,1052	0/0:29,0:29:84.28:0,84,1321	0/0:13,0:13:33.06:0,33,475	0/0:34,0:34:99:0,102,1559	0/0:30,0:30:87.30:0,87,1390	0/0:16,0:16:48.16:0,48,767	0/0:28,0:28:84.29:0,84,1338	0/1:1,14:15:2.80:542,0,3	0/0:28,0:28:84.29:0,84,1343	0/0:21,0:21:63.21:0,63,1003	0/0:11,0:11:33.10:0,33,506	0/0:11,0:11:21.07:0,21,336	0/0:48,0:48:99:0,135,2149	0/0:26,0:26:72.22:0,72,1103	0/0:18,0:18:42.14:0,42,665	0/0:29,0:29:87.30:0,87,1385	0/0:25,0:25:69.24:0,69,1103	1/1:1,22:23:18.22:816,18,0	0/0:28,0:28:81.26:0,81,1269	0/0:8,0:8:24.08:0,24,384
chr10	98456855	.	AAC	A	1460.90	PASS	AB=0.862;AC=38;AF=0.792;AN=48;BaseQRankSum=-0.633;DP=516;FS=3.524;HRun=0;HaplotypeScore=82.1972;InbreedingCoeff=0.1788;MQ=71.08;MQ0=14;MQRankSum=1.748;QD=3.72;ReadPosRankSum=-1.159;VQSLOD=2.1258;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:30:48.82:49,0,59	1/1:11,0:11:2.84:32,3,0	./.	./.	1/1:13,4:17:2.60:14,3,0	1/1:14,1:14:3.01:32,3,0	./.	0/0:12,0:12:0:0,0,0	1/1:15,2:19:20.69:176,21,0	1/1:21,0:26:14.43:80,14,0	1/1:13,0:15:2.84:14,3,0	1/1:12,0:12:5.65:51,6,0	1/1:8,0:16:11.46:59,11,0	1/1:10,1:14:6.02:63,6,0	1/1:20,1:26:8.84:71,9,0	0/0:16,0:18:6:0,6,53	1/1:18,8:26:14.12:131,14,0	0/0:18,0:18:12.04:0,12,163	0/1:8,4:10:13.12:79,0,13	1/1:12,6:19:11.88:96,12,0	0/1:15,1:23:33.09:37,0,33	1/1:15,9:23:17.99:173,18,0	./.	1/1:30,2:34:17.88:184,18,0	1/1:14,0:15:5.68:28,6,0	0/1:20,0:20:8.06:86,0,8	1/1:11,0:11:12.01:113,12,0	1/1:3,0:3:2.99:24,3,0
chr10	98456901	.	CACACGA	C	202.37	PASS	AB=0.967;AC=9;AF=0.161;AN=56;BaseQRankSum=2.733;DP=644;FS=33.874;HRun=0;HaplotypeScore=136.7851;InbreedingCoeff=-0.2192;MQ=52.64;MQ0=54;MQRankSum=-0.746;QD=1.01;ReadPosRankSum=0.333;VQSLOD=1.1897;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:43:34.05:0,34,402	0/1:4,3:7:38.57:39,0,58	0/0:26,0:3:5.90:0,6,84	0/0:31,0:5:1.82:0,2,91	0/0:21,0:20:35.85:0,36,541	0/0:15,0:14:21.53:0,22,298	0/0:19,5:21:39.13:0,39,561	0/0:17,0:16:39:0,39,541	0/0:23,0:22:54.29:0,54,792	0/1:25,0:25:46.97:47,0,701	0/0:12,0:12:28.37:0,28,378	0/1:20,0:20:31.37:31,0,487	0/1:24,0:23:87.32:87,0,370	0/0:14,0:13:4.24:0,4,258	0/1:22,0:23:35.78:36,0,477	0/0:18,0:17:12.04:0,12,204	0/1:32,0:31:25.12:25,0,741	0/0:23,0:23:24.07:0,24,427	0/1:17,0:9:35.64:36,0,229	0/1:20,0:20:21.54:22,0,346	0/0:36,0:32:43.91:0,44,658	0/0:27,0:27:31.48:0,31,712	0/0:23,0:21:36.08:0,36,493	0/0:42,0:42:14.75:0,15,1025	0/0:21,0:21:39.45:0,39,557	0/1:32,0:31:18.58:19,0,769	0/0:13,0:12:29.22:0,29,351	0/0:3,0:3:9.03:0,9,124
chr10	98456905	.	C	CGAGA	301.07	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=7.602;DP=678;FS=0.000;HRun=0;HaplotypeScore=130.7998;InbreedingCoeff=0.6154;MQ=53.53;MQ0=53;MQRankSum=0.898;QD=2.15;ReadPosRankSum=-1.310;VQSLOD=2.3408;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,30:43:12.16:157,12,0	0/0:6,0:6:9.03:0,9,132	0/0:40,0:6:11.90:0,12,152	0/0:37,0:7:14.42:0,14,156	0/0:22,0:21:45.07:0,45,717	0/0:17,0:16:24.05:0,24,388	0/0:26,0:23:45.08:0,45,694	0/0:16,0:15:33.11:0,33,545	0/0:22,0:22:63.18:0,63,979	0/0:27,0:27:60.20:0,60,984	0/0:13,0:13:27.08:0,27,534	0/0:21,0:21:47.28:0,47,740	0/0:25,0:25:45.14:0,45,667	0/1:18,0:17:15.97:16,0,387	0/0:24,0:24:43.02:0,43,680	1/1:6,0:17:5.89:17,6,0	0/0:33,0:32:60.20:0,60,945	1/1:9,13:24:13.33:159,13,0	0/0:16,0:9:15.05:0,15,220	0/0:20,0:20:26.99:0,27,394	0/0:36,0:32:45.13:0,45,703	0/0:27,0:27:46.60:0,47,724	0/0:25,0:23:41.79:0,42,669	0/0:43,0:43:84.27:0,84,1316	0/0:19,0:19:45.15:0,45,736	0/1:32,0:31:92.82:93,0,150	0/0:14,0:13:27.09:0,27,435	0/0:4,0:4:9.03:0,9,148
chr10	98456923	.	A	AGA	950.88	PASS	AB=0.909;AC=10;AF=0.179;AN=56;BaseQRankSum=5.299;DP=794;FS=1.382;HRun=0;HaplotypeScore=129.3730;InbreedingCoeff=0.4510;MQ=60.46;MQ0=50;MQRankSum=0.697;QD=4.00;ReadPosRankSum=-1.251;VQSLOD=2.7955;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:34:12.04:167,12,0	0/0:6,0:6:8.99:0,9,92	0/0:96,0:25:9.12:0,9,96	0/1:93,0:28:43.99:44,0,58	0/0:21,0:21:45:0,45,522	0/0:15,0:15:24.07:0,24,277	0/0:33,0:30:45.06:0,45,502	0/0:22,0:21:33.10:0,33,395	0/0:29,0:30:57.14:0,57,688	0/0:29,0:29:60.17:0,60,701	0/1:16,0:16:7.82:8,0,341	0/0:21,0:21:47.67:0,48,514	0/0:29,0:29:44.80:0,45,451	0/1:17,0:17:15.98:16,0,272	0/0:26,0:26:44.15:0,44,492	1/1:25,0:24:7.57:74,8,0	0/0:27,0:26:59.96:0,60,643	1/1:20,0:21:11.55:150,12,0	0/0:14,0:10:15.04:0,15,164	0/0:19,0:19:26.83:0,27,271	0/0:31,0:28:45.11:0,45,506	0/0:26,0:26:19.26:0,19,486	0/0:21,0:21:42.10:0,42,480	0/0:43,0:42:85.39:0,85,891	0/0:22,0:22:45.13:0,45,523	0/1:12,14:28:73.86:644,0,74	0/0:12,0:12:27.08:0,27,316	0/0:12,0:12:9.03:0,9,105
chr10	98459444	.	GACAC	G	3704.23	PASS	AB=0.525;AC=7;AF=0.125;AN=56;BaseQRankSum=10.137;DP=684;FS=4.887;HRun=0;HaplotypeScore=115.6730;InbreedingCoeff=0.8234;MQ=72.13;MQ0=4;MQRankSum=-1.229;QD=34.95;ReadPosRankSum=2.484;VQSLOD=3.7423;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,28:37:69.23:1158,69,0	0/0:4,0:4:12.04:0,12,300	0/0:44,0:36:45.37:0,45,1051	0/0:29,0:21:47.52:0,48,1013	0/0:22,0:22:60.21:0,60,1491	0/0:27,0:28:75.03:0,75,1725	0/0:31,0:33:87.09:0,87,2057	0/0:31,0:32:69:0,69,1562	0/0:18,0:18:45.15:0,45,1124	0/0:22,0:22:60.21:0,60,1463	0/0:26,0:26:75.26:0,75,1795	0/0:32,0:32:75.26:0,75,1847	0/0:26,0:26:68.97:0,69,1491	0/0:24,0:25:65.96:0,66,1516	0/0:27,0:28:72.01:0,72,1653	1/1:9,28:37:75.26:1273,75,0	0/0:26,0:26:63.19:0,63,1522	1/1:1,10:11:24.08:407,24,0	0/0:18,0:18:45.15:0,45,1122	0/0:19,0:20:54.19:0,54,1262	0/0:39,0:40:99:0,111,2499	0/0:21,0:21:54.19:0,54,1318	0/0:20,0:22:56.76:0,57,1176	0/0:18,0:18:51.18:0,51,1258	0/0:15,0:15:42.14:0,42,1049	0/1:2,19:21:61.56:867,0,62	0/0:21,0:23:59.78:0,60,1365	0/0:5,0:5:15.05:0,15,375
chr10	98460506	.	TTCTCTCTCTCTCTCTCTC	T	1218.23	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.678;DP=647;FS=0.000;HRun=0;HaplotypeScore=294.9299;InbreedingCoeff=0.8289;MQ=70.90;MQ0=14;MQRankSum=-3.882;QD=17.92;ReadPosRankSum=0.772;VQSLOD=1.6698;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:22:12.70:445,13,0	0/0:11,0:11:9.03:0,9,540	0/0:22,0:19:2.97:0,3,20	0/0:31,0:16:6.02:0,6,61	0/0:27,0:27:42.08:0,42,1502	0/0:20,0:20:29.90:0,30,970	0/0:24,0:24:21.15:0,21,1152	0/0:43,0:43:48.77:0,49,540	0/0:7,0:15:9.50:0,10,493	0/0:32,0:32:60.12:0,60,2629	0/0:20,0:21:33.06:0,33,1433	0/0:21,0:22:38.89:0,39,1452	0/0:24,0:23:29.98:0,30,1071	0/0:21,0:20:42.11:0,42,1629	0/0:20,0:20:38.25:0,38,1740	1/1:11,18:29:10.71:443,11,0	0/0:16,0:16:33.08:0,33,1478	1/1:16,0:16:14.26:462,14,0	0/0:20,0:19:18:0,18,293	0/0:24,0:23:23.99:0,24,659	0/0:15,0:15:21.93:0,22,878	0/0:23,0:23:42.08:0,42,1436	0/0:20,0:20:45.02:0,45,1342	0/0:29,0:33:60.16:0,60,3241	0/0:23,0:24:30.51:0,31,863	0/0:28,0:29:42.08:0,42,1334	0/0:28,0:27:57.07:0,57,2635	0/0:12,0:11:12.01:0,12,336
chr10	98460565	.	T	TC	535.94	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.939;DP=550;FS=1.792;HRun=7;HaplotypeScore=78.9136;InbreedingCoeff=0.6305;MQ=63.60;MQ0=7;MQRankSum=2.472;QD=11.17;ReadPosRankSum=-1.948;VQSLOD=2.0154;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:64.86:0,65,573	0/0:15,0:15:35.98:0,36,327	0/1:25,0:18:6.41:6,0,275	0/0:26,0:18:5.99:0,6,183	0/0:19,0:19:53.87:0,54,503	0/0:17,0:17:38.59:0,39,376	0/0:13,0:13:18.03:0,18,174	0/0:24,0:23:48.02:0,48,454	0/0:19,0:19:39.04:0,39,370	0/0:30,0:30:78.11:0,78,746	0/0:21,0:21:51.07:0,51,490	0/0:21,0:21:30.03:0,30,289	0/0:14,0:14:26.97:0,27,245	0/0:16,0:15:32.86:0,33,318	0/0:22,0:22:45.06:0,45,430	0/0:21,0:20:26.40:0,26,208	0/0:19,0:19:48.07:0,48,462	0/0:15,0:15:38.94:0,39,355	0/0:11,0:11:30.05:0,30,288	0/0:19,0:19:45.94:0,46,432	0/0:15,0:15:29.73:0,30,269	0/0:16,0:16:45.07:0,45,434	0/0:24,0:24:60.98:0,61,581	0/0:33,0:33:81.11:0,81,775	0/0:11,0:11:27.03:0,27,257	1/1:4,18:22:54.14:629,54,0	0/0:29,0:29:69.04:0,69,649	0/0:7,0:7:14.76:0,15,127
chr10	98460720	.	C	CGTGT	1132.85	PASS	AB=0.717;AC=3;AF=0.054;AN=56;BaseQRankSum=7.759;DP=903;FS=2.006;HRun=0;HaplotypeScore=180.6803;InbreedingCoeff=0.5529;MQ=56.14;MQ0=19;MQRankSum=-2.049;QD=17.70;ReadPosRankSum=-0.486;VQSLOD=3.4275;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,2:54:1.02:0,1,474	0/0:13,0:13:36.11:0,36,695	0/0:57,0:20:35.79:0,36,670	0/0:53,0:15:41.83:0,42,602	0/0:25,0:25:60.18:0,60,1114	0/0:13,0:13:36.12:0,36,720	0/0:36,0:36:97.30:0,97,1902	0/0:38,0:38:99:0,111,2010	0/0:24,0:24:69.21:0,69,1329	0/0:27,0:27:75.15:0,75,1366	0/0:26,0:26:78.19:0,78,1383	0/0:33,0:33:78.27:0,78,1553	0/0:32,0:32:93.30:0,93,1833	0/0:31,0:30:81.25:0,81,1581	0/0:35,0:35:93.30:0,93,1863	1/1:1,21:26:39.11:870,39,0	0/0:25,0:25:66.19:0,66,1260	0/0:20,0:20:25.35:0,25,364	0/0:19,0:17:45.13:0,45,808	0/0:17,0:17:48.11:0,48,885	0/0:85,0:83:99:0,235,4457	0/0:30,0:30:78.25:0,78,1550	0/0:25,0:25:72.22:0,72,1350	0/0:57,0:57:99:0,150,2825	0/0:26,0:26:51.37:0,51,1128	0/1:23,0:35:99:368,0,113	0/0:19,0:18:54.16:0,54,1015	0/0:17,0:17:48.16:0,48,978
chr10	98461138	.	C	CGG	585.57	PASS	AB=0.605;AC=1;AF=0.018;AN=56;BaseQRankSum=5.794;DP=649;FS=0.000;HRun=0;HaplotypeScore=79.3493;InbreedingCoeff=-0.0100;MQ=79.45;MQ0=0;MQRankSum=-4.018;QD=22.52;ReadPosRankSum=-0.307;VQSLOD=3.6600;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,1847	0/0:8,0:8:24.08:0,24,377	0/0:19,0:19:57.13:0,57,778	0/0:26,0:26:75.12:0,75,1097	0/0:20,0:20:51.16:0,51,789	0/0:19,0:19:54.18:0,54,879	0/0:36,0:36:99:0,108,1737	0/0:28,0:28:78.26:0,78,1241	0/0:15,0:15:45.15:0,45,732	0/0:22,0:22:66.22:0,66,1024	0/0:22,0:22:60.18:0,60,924	0/0:32,0:32:96.33:0,96,1555	0/0:19,0:19:57.19:0,57,928	0/0:20,0:20:60.17:0,60,924	0/0:27,0:27:81.28:0,81,1315	0/0:0,0:13:25.36:0,25,95	0/0:43,0:43:99:0,126,2001	0/0:26,0:26:72.25:0,72,1168	0/0:16,0:16:48.15:0,48,741	0/0:7,0:7:21.07:0,21,340	0/0:62,0:62:99:0,184,2918	0/0:18,0:18:54.17:0,54,854	0/0:12,0:12:33.10:0,33,511	0/0:33,0:33:99:0,99,1576	0/0:22,0:22:63.18:0,63,978	0/1:9,17:26:22.28:660,0,22	0/0:14,0:14:42.11:0,42,631	0/0:3,0:3:9.02:0,9,124
chr10	98465456	.	CTG	C	575.33	PASS	AB=0.906;AC=22;AF=0.423;AN=52;BaseQRankSum=5.292;DP=705;FS=9.017;HRun=0;HaplotypeScore=98.8314;InbreedingCoeff=-0.1882;MQ=66.88;MQ0=5;MQRankSum=-0.647;QD=1.31;ReadPosRankSum=1.955;VQSLOD=1.3040;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:37:5.64:6,0,6	0/1:13,1:15:28.93:29,0,138	./.	./.	0/1:12,0:12:9.78:10,0,117	0/0:18,0:18:18.06:0,18,248	0/1:29,6:35:22.50:23,0,227	0/1:21,3:24:32.73:36,0,33	0/1:21,4:25:35.58:36,0,298	0/0:18,0:19:6.91:0,7,229	1/1:7,0:7:0.51:27,1,0	0/1:34,5:39:87.67:88,0,290	0/1:27,1:30:24.64:25,0,280	0/1:22,8:30:29.56:30,0,405	0/1:21,5:28:46.74:47,0,275	0/0:15,0:15:14.95:0,15,136	0/0:13,0:23:24:0,24,227	1/1:23,0:23:9.96:74,10,0	0/0:21,0:25:24.65:0,25,207	1/1:16,0:16:0.47:1,0,0	0/0:36,0:56:9:0,9,116	0/1:11,2:13:8.83:9,0,220	0/0:10,0:10:11.99:0,12,129	0/1:36,3:39:56.34:56,0,437	0/1:18,0:17:66.14:66,0,117	0/1:32,0:32:25.09:25,0,76	0/0:5,0:16:12:0,12,105	1/1:10,6:16:14.87:145,15,0
chr10	98465481	.	TGTGTGTGTGTGTGTGTGC	T	940.96	PASS	AB=0.859;AC=3;AF=0.054;AN=56;BaseQRankSum=7.835;DP=677;FS=9.406;HRun=0;HaplotypeScore=254.4474;InbreedingCoeff=-0.0557;MQ=53.93;MQ0=10;MQRankSum=-0.052;QD=12.06;ReadPosRankSum=-1.512;VQSLOD=0.8972;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:51.06:51,0,58	0/0:15,0:15:39.01:0,39,1620	0/1:21,0:7:6.93:7,0,235	0/0:28,0:11:23.86:0,24,362	0/0:16,0:16:39.05:0,39,1701	0/0:17,0:17:39.12:0,39,2251	0/0:33,0:33:72.95:0,73,3421	0/0:21,0:20:53.60:0,54,1163	0/0:24,0:24:60.13:0,60,2961	0/0:24,0:23:63.13:0,63,2602	0/0:7,0:7:15.05:0,15,915	0/0:35,0:35:82.33:0,82,3718	0/0:29,0:29:78.72:0,79,3746	0/0:34,0:34:75.24:0,75,4433	0/0:29,0:29:72.01:0,72,3432	0/0:16,0:16:32.63:0,33,1408	0/0:27,0:27:61.42:0,61,2939	0/0:28,0:28:13.83:0,14,341	0/0:16,0:15:40.54:0,41,1335	0/0:16,0:16:18.61:0,19,380	0/0:56,0:55:56.99:0,57,2298	0/0:22,0:22:60.10:0,60,3237	0/0:11,0:11:24.04:0,24,1398	0/0:42,0:42:87.64:0,88,4521	0/0:26,0:25:57.03:0,57,3139	0/1:7,19:26:99:977,0,307	0/0:14,0:14:15.05:0,15,964	0/0:13,0:12:27.05:0,27,1271
chr10	98465487	.	TGTGTGTGTGTGC	T	910.51	PASS	AB=0.851;AC=5;AF=0.089;AN=56;BaseQRankSum=7.685;DP=667;FS=2.465;HRun=0;HaplotypeScore=192.9491;InbreedingCoeff=0.4108;MQ=54.43;MQ0=8;MQRankSum=-2.531;QD=8.75;ReadPosRankSum=-0.552;VQSLOD=2.8171;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:6,25:31:4.50:131,0,4	0/0:16,0:16:35.93:0,36,1042	0/1:21,0:10:1.97:2,0,113	0/0:25,0:10:20.17:0,20,179	0/0:16,0:16:34.74:0,35,1001	0/0:15,0:15:36.08:0,36,1457	0/0:33,0:33:72.38:0,72,2194	0/0:18,0:17:36.18:0,36,369	0/0:22,0:22:56.95:0,57,1872	0/0:24,0:23:66.06:0,66,1613	0/0:9,0:9:21.04:0,21,582	0/0:31,0:31:70.94:0,71,2282	0/0:30,0:30:74.07:0,74,2248	0/0:33,0:33:75.13:0,75,2833	0/0:28,0:28:65.85:0,66,2074	0/0:15,0:15:32.52:0,33,763	0/0:28,0:28:60.32:0,60,1803	1/1:28,0:28:7.03:372,7,0	0/0:14,0:14:38.63:0,39,809	0/0:16,0:16:15.82:0,16,157	0/0:56,0:55:50.61:0,51,1305	0/0:22,0:22:60.10:0,60,2122	0/0:13,0:13:26.96:0,27,960	0/0:44,0:44:85.84:0,86,2814	0/0:25,0:24:53.98:0,54,1913	0/1:24,0:24:99:513,0,264	0/0:18,0:18:26.91:0,27,728	0/0:12,0:12:27.03:0,27,782
chr10	98465489	.	TGTGTGTGTGC	T	1041.99	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=7.658;DP=670;FS=0.712;HRun=0;HaplotypeScore=173.9882;InbreedingCoeff=0.6110;MQ=54.55;MQ0=8;MQRankSum=-1.749;QD=12.71;ReadPosRankSum=-0.284;VQSLOD=2.6589;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:31:6.01:101,6,0	0/0:15,0:15:32.93:0,33,838	0/0:22,0:10:0.90:0,1,126	0/0:23,0:9:20.16:0,20,139	0/0:16,0:16:35.88:0,36,828	0/0:16,0:16:33.07:0,33,1190	0/0:35,0:35:72.36:0,72,1804	0/0:17,0:16:26.18:0,26,257	0/0:22,0:22:53.95:0,54,1581	0/0:24,0:23:62.99:0,63,1294	0/0:10,0:10:24.02:0,24,495	0/0:30,0:30:72:0,72,1868	0/0:29,0:29:64.96:0,65,1719	0/0:33,0:33:72.11:0,72,2248	0/0:29,0:29:71.83:0,72,1808	0/0:15,0:15:32.51:0,33,591	0/0:29,0:29:60.30:0,60,1519	1/1:5,23:28:8.79:603,9,0	0/0:15,0:15:40.46:0,40,693	0/0:16,0:16:12.93:0,13,107	0/0:56,0:55:53.58:0,54,1080	0/0:22,0:22:59.95:0,60,1716	0/0:12,0:12:26.96:0,27,820	0/0:43,0:43:76.23:0,76,2267	0/0:25,0:24:45.04:0,45,1503	0/1:23,0:23:99:451,0,237	0/0:19,0:19:29.74:0,30,633	0/0:15,0:15:35.05:0,35,675
chr10	98465881	.	T	TC	2097.27	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.616;DP=670;FS=5.226;HRun=1;HaplotypeScore=68.5984;InbreedingCoeff=0.9989;MQ=85.29;MQ0=0;MQRankSum=-4.433;QD=33.29;ReadPosRankSum=1.647;VQSLOD=3.3897;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,35:36:90.30:1331,90,0	0/0:13,0:13:39.08:0,39,462	0/0:23,0:23:69.19:0,69,856	0/0:20,0:20:49.26:0,49,518	0/0:27,0:27:81.25:0,81,1036	0/0:15,0:15:45.11:0,45,551	0/0:29,0:29:87.22:0,87,1060	0/0:29,0:29:84.26:0,84,1061	0/0:18,0:18:54.15:0,54,670	0/0:21,0:21:60.17:0,60,746	0/0:21,0:21:63.19:0,63,791	0/0:25,0:25:75.22:0,75,946	0/0:18,0:18:54.16:0,54,685	0/0:24,0:24:72.19:0,72,914	0/0:30,0:30:90.28:0,90,1153	0/0:21,0:21:63.20:0,63,817	0/0:37,0:37:99:0,108,1351	1/1:2,25:27:60.20:888,60,0	0/0:17,0:17:51.10:0,51,593	0/0:21,0:21:63.19:0,63,791	0/0:37,0:37:99:0,111,1373	0/0:21,0:21:60.08:0,60,738	0/0:26,0:26:78.23:0,78,973	0/0:27,0:27:78.22:0,78,991	0/0:23,0:23:63.18:0,63,790	0/0:27,0:27:78.25:0,78,1010	0/0:29,0:28:87.27:0,87,1112	0/0:8,0:8:24.08:0,24,311
chr10	98466441	.	T	TTAGCCA	3588.06	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.217;DP=588;FS=0.000;HRun=0;HaplotypeScore=128.7366;InbreedingCoeff=0.9950;MQ=85.45;MQ0=0;MQRankSum=-9.810;QD=83.44;ReadPosRankSum=-0.968;VQSLOD=4.2399;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,21:32:78.27:2692,78,0	0/0:8,0:8:21.07:0,21,486	0/0:22,0:22:66.21:0,66,1508	0/0:17,0:17:42.45:0,42,937	0/0:18,0:18:51.18:0,51,1201	0/0:28,0:28:81.27:0,81,1896	0/0:22,0:22:66.21:0,66,1532	0/0:33,0:33:96.33:0,96,2209	0/0:22,0:22:66.23:0,66,1587	0/0:27,0:27:74.81:0,75,1722	0/0:20,0:20:57.17:0,57,1304	0/0:11,0:11:30.10:0,30,663	0/0:27,0:27:78.26:0,78,1812	0/0:14,0:14:42.13:0,42,945	0/0:20,0:20:60.21:0,60,1443	0/0:24,0:24:72.25:0,72,1711	0/0:27,0:27:78.21:0,78,1728	1/1:5,6:11:27.09:896,27,0	0/0:24,0:24:66.23:0,66,1580	0/0:25,0:25:72.25:0,72,1731	0/0:19,0:19:54.19:0,54,1257	0/0:15,0:15:39.12:0,39,871	0/0:25,0:25:66.23:0,66,1587	0/0:22,0:22:66.23:0,66,1586	0/0:20,0:20:60.21:0,60,1408	0/0:21,0:21:63.22:0,63,1489	0/0:27,0:27:69.24:0,69,1657	0/0:7,0:7:21.07:0,21,460
chr10	98466636	.	A	AGGTC	5313.05	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-10.349;DP=619;FS=6.254;HRun=0;HaplotypeScore=98.4144;InbreedingCoeff=0.9974;MQ=85.36;MQ0=0;MQRankSum=-5.589;QD=74.83;ReadPosRankSum=1.371;VQSLOD=6.9490;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,36:42:99:2954,108,0	0/0:10,0:10:30.10:0,30,571	0/0:17,0:17:51.14:0,51,951	0/0:26,0:26:72.24:0,72,1306	0/0:24,0:24:66.20:0,66,1244	0/0:23,0:23:63.19:0,63,1155	0/0:20,0:20:54.17:0,54,1001	0/0:40,0:40:99:0,117,2117	0/0:19,0:19:57.20:0,57,1105	0/0:22,0:22:63.21:0,63,1189	0/0:19,0:19:57.20:0,57,1097	0/0:24,0:24:72.25:0,72,1396	0/0:15,0:15:45.15:0,45,872	0/0:14,0:14:42.11:0,42,745	0/0:22,0:22:66.23:0,66,1280	0/0:18,0:18:54.19:0,54,1047	0/0:44,0:44:99:0,129,2327	1/1:1,28:29:87.30:2359,87,0	0/0:25,0:25:72.25:0,72,1366	0/0:19,0:19:57.17:0,57,1039	0/0:20,0:20:57.20:0,57,1105	0/0:7,0:7:21.07:0,21,407	0/0:23,0:23:66.23:0,66,1271	0/0:24,0:24:69.20:0,69,1268	0/0:20,0:20:60.21:0,60,1163	0/0:25,0:25:72.24:0,72,1361	0/0:18,0:18:48.16:0,48,929	0/0:10,0:10:30.08:0,30,546
chr10	98466855	.	C	CG	2790.96	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.356;DP=547;FS=5.242;HRun=2;HaplotypeScore=63.5091;InbreedingCoeff=0.9884;MQ=75.33;MQ0=0;MQRankSum=-3.607;QD=35.78;ReadPosRankSum=2.486;VQSLOD=4.2546;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,35:39:99:1412,99,0	0/0:6,0:6:18.06:0,18,221	0/0:15,0:15:39.91:0,40,447	0/0:11,0:11:22.95:0,23,272	0/0:12,0:12:27.07:0,27,321	0/0:14,0:14:39.11:0,39,468	0/0:16,0:16:42.09:0,42,493	0/0:24,0:24:60.10:0,60,698	0/0:16,0:16:47.93:0,48,555	0/0:16,0:16:39.11:0,39,458	0/0:10,0:10:30:0,30,334	0/0:26,0:26:69.16:0,69,831	0/0:14,0:14:42.13:0,42,518	0/0:17,0:17:45.13:0,45,539	0/0:13,0:13:39.11:0,39,469	0/0:10,0:10:27.08:0,27,334	0/0:47,0:46:99:0,135,1650	1/1:0,39:39:99:1500,105,0	0/0:18,0:18:50.68:0,51,546	0/0:29,0:29:72.12:0,72,867	0/0:39,0:39:99:0,114,1322	0/0:9,0:9:18.04:0,18,209	0/0:23,0:23:63.06:0,63,714	0/0:20,0:19:54.16:0,54,656	0/0:16,0:16:45.04:0,45,523	0/0:23,0:23:60.19:0,60,739	0/0:13,0:13:38.95:0,39,425	0/0:12,0:12:27.08:0,27,334
chr10	98468601	.	T	TA	449.94	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.126;DP=471;FS=0.921;HRun=8;HaplotypeScore=49.1984;InbreedingCoeff=0.7718;MQ=73.63;MQ0=0;MQRankSum=0.146;QD=28.12;ReadPosRankSum=-1.549;VQSLOD=3.5482;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:88.28:0,88,799	0/0:4,0:4:12.01:0,12,110	0/0:10,0:10:1.47:0,1,78	0/0:10,0:9:26.87:0,27,229	0/0:18,0:18:45.02:0,45,411	0/0:12,0:12:33.02:0,33,302	0/0:6,0:6:18:0,18,160	0/0:31,0:31:80.23:0,80,709	0/0:19,0:19:48.02:0,48,439	0/0:16,0:16:39.01:0,39,357	0/0:23,0:23:35.48:0,35,497	0/0:17,0:17:42.01:0,42,384	0/0:19,0:19:54.03:0,54,494	0/0:18,0:18:48.01:0,48,435	0/0:22,0:22:63.03:0,63,576	0/0:7,0:7:18.01:0,18,165	0/0:18,0:18:47.92:0,48,427	0/0:16,0:16:42:0,42,379	0/0:18,0:18:47.99:0,48,431	0/0:30,0:30:87.01:0,87,788	0/0:6,0:6:15.01:0,15,137	0/0:12,0:12:33.02:0,33,302	0/0:13,0:13:39:0,39,349	0/0:16,0:17:49.21:0,49,419	0/0:23,0:22:60.02:0,60,549	1/1:0,16:16:48.13:545,48,0	0/0:25,0:24:57.03:0,57,521	0/0:8,0:8:18.01:0,18,164
chr10	98470875	.	CA	C	450.41	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.229;DP=484;FS=3.647;HRun=1;HaplotypeScore=47.2770;InbreedingCoeff=0.9426;MQ=65.96;MQ0=1;MQRankSum=1.299;QD=34.65;ReadPosRankSum=0.169;VQSLOD=3.2473;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,2050	0/0:4,0:4:12.04:0,12,192	0/0:22,0:20:47.59:0,48,807	0/0:19,0:18:51.62:0,52,783	0/0:12,0:12:36.12:0,36,576	0/0:38,0:38:99:0,111,1775	0/0:21,0:21:63.21:0,63,1007	0/0:23,0:23:69.23:0,69,1076	0/0:20,0:20:60.16:0,60,890	0/0:10,0:10:30.10:0,30,480	0/0:5,0:5:15.05:0,15,239	0/0:13,0:13:39.13:0,39,616	0/0:16,0:16:48.16:0,48,767	0/0:21,0:21:63.21:0,63,1006	0/0:14,0:14:42.13:0,42,649	1/1:0,13:13:39.13:545,39,0	0/0:29,0:29:81.26:0,81,1272	0/0:16,0:16:27.19:0,27,678	0/0:16,0:16:45.13:0,45,695	0/0:12,0:12:36.12:0,36,576	0/0:27,0:27:78.27:0,78,1245	0/0:6,0:6:18.06:0,18,288	0/0:7,0:7:21.07:0,21,336	0/0:22,0:22:66.23:0,66,1055	0/0:15,0:15:45.14:0,45,697	0/0:11,0:11:33.11:0,33,528	0/0:15,0:15:45.12:0,45,670	0/0:12,0:12:36.12:0,36,575
chr10	98471460	.	TGC	T	46.72	PASS	AB=0.861;AC=2;AF=0.036;AN=56;BaseQRankSum=5.816;DP=706;FS=17.373;HRun=0;HaplotypeScore=108.8895;InbreedingCoeff=-0.0351;MQ=54.61;MQ0=25;MQRankSum=-2.961;QD=1.06;ReadPosRankSum=-4.223;VQSLOD=-0.3736;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:27.02:0,27,377	0/0:6,0:6:15.05:0,15,261	0/0:30,0:15:13.89:0,14,459	0/0:25,0:17:41.63:0,42,488	0/0:18,0:18:24.90:0,25,567	0/0:26,0:26:72.22:0,72,1258	0/0:31,0:30:65.13:0,65,1163	0/0:21,0:14:35.95:0,36,551	0/0:21,0:21:40.33:0,40,829	0/0:27,0:27:47.90:0,48,811	0/0:10,0:10:27.08:0,27,477	0/0:23,0:23:67.65:0,68,1048	0/0:21,0:21:47.03:0,47,875	0/0:30,0:29:77.77:0,78,1225	0/0:19,0:19:48.16:0,48,885	0/1:8,5:12:32.26:120,0,32	0/0:39,0:38:80.85:0,81,1642	0/0:19,0:17:26.73:0,27,668	0/1:31,0:29:7.21:7,0,913	0/0:10,0:10:22.30:0,22,350	0/0:116,0:110:99:0,171,3510	0/0:12,0:12:30.10:0,30,545	0/0:12,0:12:32.90:0,33,541	0/0:49,0:47:77.08:0,77,1577	0/0:22,0:22:34.98:0,35,836	0/0:25,0:24:67.08:0,67,1078	0/0:16,0:16:36.03:0,36,643	0/0:10,0:10:22.32:0,22,353
chr10	98471502	.	TGTG	T	1232.37	PASS	AB=0.975;AC=7;AF=0.125;AN=56;BaseQRankSum=10.724;DP=840;FS=0.000;HRun=0;HaplotypeScore=141.7584;InbreedingCoeff=0.0645;MQ=44.65;MQ0=67;MQRankSum=-10.089;QD=7.95;ReadPosRankSum=-3.364;VQSLOD=2.2899;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,5:21:2.17:26,2,0	0/0:8,0:8:20.64:0,21,269	0/0:44,0:2:6.02:0,6,80	0/0:66,0:5:15.03:0,15,173	0/0:16,0:15:32.78:0,33,500	0/0:24,0:23:59.87:0,60,1149	0/0:29,0:27:56.14:0,56,876	0/1:44,0:30:99:457,0,341	0/0:24,0:22:54.07:0,54,928	0/0:38,0:30:12.68:0,13,806	0/0:13,0:13:30.08:0,30,452	0/0:22,0:19:42.13:0,42,724	0/0:20,0:19:46.48:0,46,853	0/0:22,0:20:47.49:0,47,785	0/0:21,0:20:44.79:0,45,736	0/1:18,3:20:44.30:204,0,44	0/0:39,0:38:66.53:0,67,1530	0/1:18,0:15:26.01:230,0,26	0/0:26,0:15:39.12:0,39,529	0/0:16,0:14:34.26:0,34,472	0/0:127,0:115:99:0,241,4148	0/0:16,0:13:29.77:0,30,452	0/0:9,0:8:20.74:0,21,332	0/0:61,0:54:99:0,131,2444	0/0:23,0:23:61.09:0,61,899	0/1:34,0:28:88.22:297,0,88	0/0:21,0:19:44.01:0,44,643	0/1:12,0:12:99:145,0,99
chr10	98471504	.	TG	T	1369.05	PASS	AB=0.698;AC=7;AF=0.125;AN=56;BaseQRankSum=10.794;DP=837;FS=1.071;HRun=2;HaplotypeScore=118.8158;InbreedingCoeff=0.0545;MQ=44.76;MQ0=65;MQRankSum=-11.664;QD=8.89;ReadPosRankSum=-3.106;VQSLOD=0.1793;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,12:21:2.03:26,2,0	0/0:8,0:8:20.39:0,20,226	0/0:47,0:3:6.02:0,6,80	0/0:69,0:5:15.03:0,15,173	0/0:17,0:16:35.48:0,35,463	0/0:24,0:23:59.56:0,60,835	0/0:29,0:27:58.38:0,58,753	0/1:25,18:30:99:496,0,297	0/0:23,0:21:56.80:0,57,738	0/0:38,0:30:5.33:0,5,653	0/0:13,0:13:30.08:0,30,384	0/0:21,0:18:42.11:0,42,568	0/0:19,0:18:48.41:0,48,682	0/0:20,0:18:46.88:0,47,603	0/0:20,0:19:47.48:0,47,621	0/1:10,11:20:24.37:174,0,24	0/0:37,1:38:89.91:0,90,1239	0/1:8,10:15:33.52:250,0,34	0/0:25,0:16:41.98:0,42,512	0/0:16,0:14:32.72:0,33,391	0/0:122,2:112:99:0,252,3263	0/0:19,0:16:29.46:0,29,379	0/0:9,0:8:20.43:0,20,258	0/0:57,3:53:99:0,130,1803	0/0:23,0:23:60.74:0,61,731	0/1:25,10:27:47.04:339,0,47	0/0:21,0:19:43.70:0,44,528	0/1:7,5:12:31.50:209,0,32
chr10	98471505	.	G	GT	1499.10	PASS	AB=0.889;AC=8;AF=0.143;AN=56;BaseQRankSum=11.102;DP=834;FS=1.041;HRun=1;HaplotypeScore=120.2002;InbreedingCoeff=0.0774;MQ=44.77;MQ0=65;MQRankSum=-11.489;QD=7.93;ReadPosRankSum=-3.020;VQSLOD=-0.2194;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:20:2.02:26,2,0	0/0:8,0:8:21.01:0,21,245	0/0:47,0:3:6.02:0,6,80	0/0:69,0:5:15.03:0,15,174	0/0:17,0:16:36.09:0,36,469	0/0:24,0:23:60.17:0,60,804	0/0:28,0:27:59.38:0,59,751	0/1:45,0:32:99:539,0,263	0/0:23,0:21:54.71:0,55,689	0/1:32,3:28:15.48:15,0,662	0/0:13,0:13:30.08:0,30,375	0/0:21,0:18:40.37:0,40,525	0/0:19,0:18:50.81:0,51,667	0/0:20,0:18:48.08:0,48,588	0/0:19,0:18:48.10:0,48,615	0/1:19,2:20:21.60:133,0,22	0/0:38,0:38:93.18:0,93,1289	0/1:15,1:13:17.49:207,0,17	0/0:25,0:16:41.98:0,42,511	0/0:16,0:14:35.96:0,36,417	0/0:124,0:112:99:0,240,3205	0/0:20,0:17:30.06:0,30,368	0/0:9,0:8:21.04:0,21,265	0/0:60,1:54:99:0,132,1754	0/0:23,0:23:62.83:0,63,769	0/1:30,4:27:31.85:403,0,32	0/0:20,0:18:44.31:0,44,521	0/1:7,3:12:5.75:307,0,6
chr10	98471532	.	CTG	C	1209.15	PASS	AB=0.931;AC=15;AF=0.268;AN=56;BaseQRankSum=6.181;DP=793;FS=3.105;HRun=0;HaplotypeScore=119.7764;InbreedingCoeff=0.4893;MQ=46.30;MQ0=62;MQRankSum=-7.252;QD=4.65;ReadPosRankSum=-0.533;VQSLOD=2.8817;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,1:17:0:0,0,0	0/1:5,0:5:30.05:30,0,87	0/0:52,0:4:3.01:0,3,42	0/1:63,0:5:0.82:1,0,39	0/0:18,0:17:38.72:0,39,472	0/1:19,1:20:3.91:4,0,399	0/0:32,0:29:11.47:0,11,607	1/1:43,0:31:50.52:518,51,0	0/0:21,0:20:43.61:0,44,545	0/0:30,1:28:24.08:0,24,685	0/0:15,0:15:33.11:0,33,532	0/0:15,0:13:33.08:0,33,469	0/0:25,0:25:35.15:0,35,755	0/1:19,1:20:7.95:8,0,507	0/0:24,0:23:51.34:0,51,719	0/1:12,11:22:5.28:46,0,5	0/0:37,0:36:76.86:0,77,981	1/1:7,5:12:14.52:186,15,0	0/0:22,0:14:29.98:0,30,341	0/0:12,0:12:25.06:0,25,331	0/0:115,1:107:99:0,128,2858	0/0:20,0:19:45.10:0,45,658	0/0:10,0:9:21.05:0,21,301	0/0:62,0:60:99:0,123,1646	0/0:21,0:20:51.10:0,51,695	1/1:19,7:21:35.87:364,36,0	0/1:16,0:15:6.59:7,0,332	1/1:7,4:11:23.40:213,23,0
chr10	98474419	.	G	GCA	2188.34	PASS	AB=0.815;AC=20;AF=0.370;AN=54;BaseQRankSum=-2.389;DP=582;FS=12.946;HRun=0;HaplotypeScore=78.4853;InbreedingCoeff=-0.0191;MQ=59.16;MQ0=9;MQRankSum=-1.010;QD=6.11;ReadPosRankSum=0.373;VQSLOD=1.7065;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:35:6.25:29,6,0	0/0:9,0:9:3.01:0,3,33	0/0:35,0:19:3.01:0,3,33	./.	0/0:16,0:16:12.03:0,12,131	0/1:13,4:17:23.88:81,0,24	0/1:17,13:33:17.10:290,0,17	0/0:18,0:18:4.88:0,5,42	0/1:16,8:23:99:153,0,107	0/0:19,0:18:11.49:0,11,130	0/0:16,0:16:12.02:0,12,131	0/1:11,5:16:47.63:161,0,48	0/1:15,3:18:99:331,0,122	0/1:9,3:12:13.24:39,0,13	0/1:20,2:23:99:142,0,118	1/1:11,6:17:2.67:167,3,0	0/0:20,0:20:35.69:0,36,365	1/1:11,0:21:3.47:27,3,0	0/1:11,0:12:14.11:14,0,67	0/1:18,1:22:1.17:281,0,1	0/1:24,0:27:1.04:1,0,118	0/1:11,10:22:64.74:75,0,65	1/1:12,6:18:15.05:224,15,0	0/1:21,17:38:5.75:332,0,6	0/0:14,0:14:14.87:0,15,145	0/0:12,0:13:8.81:0,9,79	0/0:22,0:24:32.70:0,33,321	0/0:9,0:9:12.03:0,12,131
chr10	98475099	.	AC	A	2247.33	PASS	AB=0.536;AC=5;AF=0.089;AN=56;BaseQRankSum=8.851;DP=587;FS=2.165;HRun=5;HaplotypeScore=56.2871;InbreedingCoeff=0.8667;MQ=74.41;MQ0=0;MQRankSum=-4.294;QD=28.09;ReadPosRankSum=2.815;VQSLOD=4.0333;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:90.26:1021,90,0	0/0:6,0:6:15.05:0,15,202	0/0:14,0:13:23.71:0,24,300	0/0:17,0:16:22.48:0,22,465	0/0:27,0:27:78.25:0,78,1045	0/0:22,0:22:60.20:0,60,818	0/0:25,0:25:69.22:0,69,928	0/0:13,0:13:36.11:0,36,477	0/0:20,0:20:60.20:0,60,821	0/0:27,0:27:75.25:0,75,1025	0/0:20,0:20:57.18:0,57,763	0/0:23,0:23:63.21:0,63,860	0/0:21,0:21:63.17:0,63,840	0/0:21,0:21:63.20:0,63,844	0/0:24,0:24:69.23:0,69,944	0/1:2,13:15:1.93:369,0,2	0/0:19,0:19:57.16:0,57,746	1/1:1,31:32:87.25:987,87,0	0/0:13,0:13:33.10:0,33,431	0/0:23,0:23:66.22:0,66,888	0/0:14,0:14:42.13:0,42,558	0/0:13,0:13:36.12:0,36,487	0/0:20,0:20:57.19:0,57,775	0/0:17,0:17:51.17:0,51,695	0/0:35,0:35:99:0,102,1392	0/0:29,0:29:81.25:0,81,1077	0/0:36,0:36:99:0,108,1421	0/0:8,0:8:24.08:0,24,328
chr10	98475489	.	G	GA	1905.39	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.684;DP=568;FS=1.033;HRun=9;HaplotypeScore=62.0490;InbreedingCoeff=0.9052;MQ=77.91;MQ0=0;MQRankSum=-4.305;QD=23.52;ReadPosRankSum=2.734;VQSLOD=4.5638;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,39:42:82.42:1118,82,0	0/0:3,0:3:9:0,9,78	0/0:19,0:18:36.28:0,36,270	0/0:17,0:17:1.16:0,1,206	0/0:30,0:30:74.93:0,75,644	0/0:19,0:19:47.99:0,48,416	0/0:17,0:17:47.93:0,48,405	0/0:27,0:26:53.95:0,54,466	0/0:13,0:13:35.99:0,36,313	0/0:20,0:20:56.98:0,57,495	0/0:13,0:13:29.98:0,30,260	0/0:16,0:16:44.99:0,45,391	0/0:19,0:19:50.98:0,51,443	0/0:18,0:18:44.97:0,45,387	0/0:18,0:18:47.98:0,48,417	1/1:5,16:21:39.11:431,39,0	0/0:25,0:25:59.97:0,60,517	1/1:2,16:18:45.12:498,45,0	0/0:32,0:32:80.76:0,81,687	0/0:17,0:19:52.06:0,52,428	0/0:23,0:23:56.93:0,57,489	0/0:22,0:22:56.98:0,57,495	0/0:18,0:18:50.99:0,51,443	0/0:17,0:17:38.98:0,39,339	0/0:28,0:28:77.97:0,78,674	0/0:20,0:20:47.99:0,48,417	0/0:23,0:23:53.97:0,54,468	0/0:10,0:11:32.03:0,32,266
chr10	98476468	.	A	AT	2177.35	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-11.232;DP=592;FS=2.888;HRun=8;HaplotypeScore=57.9133;InbreedingCoeff=0.9937;MQ=76.60;MQ0=1;MQRankSum=-4.943;QD=25.32;ReadPosRankSum=0.310;VQSLOD=4.4414;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,53:56:99:1523,132,0	0/0:8,0:8:18.01:0,18,165	0/0:20,0:19:35.67:0,36,307	0/0:19,0:20:26.95:0,27,237	0/0:24,0:24:72.01:0,72,652	0/0:17,0:17:48:0,48,434	0/0:15,0:15:39.01:0,39,357	0/0:34,0:34:93.03:0,93,848	0/0:16,0:16:39.02:0,39,357	0/0:34,0:34:93.03:0,93,845	0/0:14,0:14:42.02:0,42,384	0/0:21,0:21:54.01:0,54,490	0/0:17,0:17:48.02:0,48,439	0/0:19,0:19:44.99:0,45,407	0/0:23,0:23:57.02:0,57,522	1/1:2,8:10:21.06:242,21,0	0/0:33,0:33:84.01:0,84,762	1/1:3,17:20:48.14:554,48,0	0/0:20,0:20:45.02:0,45,412	0/0:17,0:17:42.01:0,42,380	0/0:17,0:17:33.01:0,33,302	0/0:19,0:19:54.03:0,54,494	0/0:18,0:18:45.02:0,45,412	0/0:12,0:12:33.02:0,33,302	0/0:22,1:23:25.39:0,25,481	0/0:31,0:31:84.03:0,84,765	0/0:24,0:24:66.02:0,66,599	0/0:10,0:10:24.01:0,24,219
chr10	98477623	.	T	TC	869.19	PASS	AB=0.997;AC=32;AF=0.640;AN=50;BaseQRankSum=1.887;DP=524;FS=2.168;HRun=0;HaplotypeScore=475.7389;InbreedingCoeff=-0.1887;MQ=23.27;MQ0=184;MQRankSum=0.509;QD=2.17;ReadPosRankSum=-2.026;VQSLOD=0.6620;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:11:5.37:36,5,0	0/1:9,0:9:4.83:21,0,5	./.	./.	0/1:20,0:19:10.45:17,0,10	1/1:15,0:10:1.31:26,1,0	0/1:18,0:7:0.49:25,0,0	0/0:13,0:1:2.50:0,2,9	0/1:14,0:14:8.01:41,0,8	0/1:37,0:37:40.70:116,0,41	1/1:17,0:17:4.85:24,5,0	1/1:20,2:17:5.97:85,6,0	1/1:13,0:9:10.56:129,11,0	1/1:13,1:11:3:99,3,0	0/1:18,0:16:3.30:100,0,3	0/1:15,0:12:5.40:7,0,5	0/0:17,0:3:0.69:0,1,3	1/1:12,0:3:4.61:19,5,0	0/1:16,0:7:9.23:9,0,23	0/1:28,0:28:4.95:19,0,5	./.	0/1:24,0:22:6.11:34,0,6	1/1:17,0:16:0.31:10,0,0	0/0:28,0:14:1.52:0,2,12	1/1:20,0:20:8.85:72,9,0	0/1:23,1:20:28.76:30,0,29	0/1:13,0:13:9.42:24,0,9	1/1:5,0:4:3.30:54,3,0
chr10	98477629	.	C	CCAT	1507.10	PASS	AB=0.944;AC=33;AF=0.635;AN=52;BaseQRankSum=1.930;DP=571;FS=4.455;HRun=0;HaplotypeScore=446.7363;InbreedingCoeff=-0.1484;MQ=23.83;MQ0=182;MQRankSum=0.609;QD=3.00;ReadPosRankSum=0.584;VQSLOD=0.3389;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,1:11:4.39:4,0,16	1/1:9,1:11:10.06:47,10,0	./.	./.	1/1:15,5:22:7.38:36,7,0	0/1:18,0:12:14.92:20,0,15	1/1:19,0:8:4.48:63,4,0	0/0:11,0:1:2.99:0,3,23	0/1:16,0:16:30.28:50,0,30	1/1:37,3:44:60.55:590,61,0	0/1:14,4:19:0.42:0,0,17	0/1:23,0:18:63.80:68,0,64	0/1:14,0:11:11.15:64,0,11	0/1:18,0:14:1.85:2,0,84	0/1:17,1:16:30.64:51,0,31	0/1:15,1:14:49.41:49,0,52	0/1:18,0:4:7.11:7,0,21	1/1:12,0:3:5.13:20,5,0	0/1:16,0:7:5.99:6,0,33	0/1:30,4:34:49:73,0,49	1/1:25,0:1:1.55:4,2,0	0/1:24,1:26:36.31:51,0,36	0/0:14,3:18:11.69:0,12,54	1/1:27,1:14:8.84:26,9,0	1/1:20,2:23:12.07:138,12,0	1/1:25,4:25:20.63:263,21,0	0/1:12,1:13:1.89:2,0,30	0/1:3,2:4:12.78:22,0,13
chr10	98477635	.	A	AGAT	1093.17	PASS	AB=0.949;AC=31;AF=0.596;AN=52;BaseQRankSum=2.204;DP=586;FS=15.461;HRun=0;HaplotypeScore=451.4555;InbreedingCoeff=-0.1419;MQ=23.86;MQ0=186;MQRankSum=-1.009;QD=2.24;ReadPosRankSum=-1.467;VQSLOD=-0.0347;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:11:0.62:0,1,16	0/1:10,1:11:7.02:24,0,7	./.	./.	1/1:17,5:22:10.47:57,10,0	1/1:18,0:12:2.46:29,2,0	1/1:20,0:8:2.38:10,2,0	0/0:11,0:1:2.88:0,3,15	0/1:16,0:16:29.80:45,0,30	1/1:43,3:47:37.86:426,38,0	0/1:16,4:20:1.14:24,0,1	0/1:23,0:18:49.32:49,0,67	0/1:16,0:12:25.75:39,0,26	0/1:18,0:14:2.27:2,0,86	0/1:17,1:16:31.62:32,0,37	0/1:17,1:14:29.37:42,0,29	0/1:19,0:5:6.64:7,0,21	1/1:13,0:4:6.10:26,6,0	0/0:14,0:7:8.72:0,9,48	0/1:32,4:35:13.57:37,0,14	0/1:28,0:3:1.12:2,0,1	0/1:26,1:26:3.76:51,0,4	0/1:17,3:19:4.57:19,0,5	1/1:27,1:14:8.99:26,9,0	0/1:22,2:23:1.51:75,0,2	1/1:25,4:25:9.11:176,9,0	0/1:12,1:13:1.50:2,0,27	1/1:2,2:4:2.26:34,2,0
chr10	98477637	.	C	CAT	831.06	PASS	AB=0.934;AC=24;AF=0.462;AN=52;BaseQRankSum=-0.782;DP=593;FS=10.517;HRun=0;HaplotypeScore=454.4693;InbreedingCoeff=-0.1112;MQ=23.90;MQ0=187;MQRankSum=1.679;QD=2.01;ReadPosRankSum=3.474;VQSLOD=0.4567;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:11:13.07:0,13,43	0/0:11,1:12:0.68:0,1,27	./.	./.	0/0:16,6:22:6.56:0,7,33	1/1:19,0:12:5.38:31,5,0	0/1:21,1:9:4.54:16,0,5	0/0:11,0:1:2.99:0,3,23	0/1:16,0:16:11.70:12,0,26	1/1:33,15:48:27.74:423,28,0	0/0:15,5:20:9.78:0,10,50	0/1:23,0:18:4.02:30,0,4	0/1:15,1:12:9.18:9,0,25	0/1:18,0:14:7.43:7,0,18	0/1:17,1:16:3.37:3,0,9	0/1:18,0:14:12.80:20,0,13	0/1:18,0:5:1.70:2,0,18	1/1:11,2:4:0.36:51,0,0	0/1:12,1:7:18.99:19,0,23	0/1:24,12:35:27.41:40,0,27	0/0:27,0:3:1.22:0,1,3	0/1:20,8:27:11.56:12,0,32	0/1:18,2:19:0.28:0,0,21	1/1:28,1:15:5.15:16,5,0	0/1:21,4:24:9.01:36,0,9	1/1:21,8:25:5.08:238,5,0	0/0:13,0:13:4.13:0,4,43	0/1:4,0:4:8.90:9,0,23
chr10	98477642	.	C	CCT	422.46	PASS	AB=0.989;AC=23;AF=0.442;AN=52;BaseQRankSum=2.059;DP=632;FS=0.765;HRun=0;HaplotypeScore=531.5115;InbreedingCoeff=0.0330;MQ=24.52;MQ0=177;MQRankSum=-0.125;QD=1.06;ReadPosRankSum=3.336;VQSLOD=0.2016;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:11:3.48:3,0,22	1/1:11,0:11:2.85:13,3,0	./.	./.	0/0:22,1:23:1.08:0,1,14	1/1:21,0:14:11.15:66,11,0	0/1:22,0:11:0.12:0,0,12	0/0:10,0:2:6:0,6,58	0/1:17,0:17:20.02:30,0,20	0/1:54,0:54:16.66:179,0,17	0/0:22,1:23:5.19:0,5,23	1/1:23,0:19:7.21:42,7,0	0/0:17,1:14:2.29:0,2,32	1/1:22,0:17:2.51:16,3,0	0/1:20,0:18:4.48:9,0,4	1/1:19,0:15:1.26:36,1,0	0/0:20,0:7:1.19:0,1,18	0/0:12,0:4:3.48:0,3,9	0/0:11,0:6:4.69:0,5,28	0/1:38,0:37:9.55:13,0,10	0/0:24,0:3:0.89:0,1,3	0/1:32,3:35:8.37:8,0,19	0/0:26,0:25:1.30:0,1,31	1/1:26,0:15:5.44:16,5,0	1/1:25,0:24:5.29:57,5,0	0/1:34,0:30:46.40:61,0,46	0/0:15,0:15:0.28:0,0,50	0/1:5,0:5:6.60:9,0,7
chr10	98477645	.	ACG	A	436.65	PASS	AB=0.981;AC=27;AF=0.519;AN=52;BaseQRankSum=2.244;DP=624;FS=1.417;HRun=0;HaplotypeScore=484.0243;InbreedingCoeff=-0.0453;MQ=24.62;MQ0=171;MQRankSum=0.112;QD=1.00;ReadPosRankSum=-1.267;VQSLOD=0.0806;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:10:24.58:25,0,56	0/1:11,0:11:12.09:35,0,12	./.	./.	1/1:22,1:23:6.25:29,6,0	0/0:19,1:14:6.44:0,6,42	0/1:20,1:11:10.38:10,0,11	1/1:8,0:1:0.47:1,0,0	0/0:17,0:17:14.35:0,14,80	0/1:53,1:54:66.85:67,0,136	1/1:23,0:23:4.78:29,5,0	0/0:20,3:19:10.60:0,11,68	0/0:18,0:14:12.32:0,12,65	0/1:21,1:17:14.01:14,0,22	0/1:20,0:18:10.90:11,0,20	1/1:18,1:15:8.49:89,8,0	0/1:18,1:7:2.25:2,0,6	0/0:12,0:4:3.96:0,4,32	1/1:11,0:6:7.82:58,8,0	0/1:38,0:37:20.50:42,0,21	0/0:23,0:3:0.01:0,0,1	0/1:36,0:35:20.49:30,0,20	1/1:27,0:25:1.50:11,1,0	0/0:25,0:15:0.94:0,1,14	1/1:24,1:24:1.05:41,1,0	0/1:32,2:30:17.89:18,0,86	1/1:15,0:15:8.15:52,8,0	0/1:5,0:5:16.19:21,0,16
chr10	98477653	.	ACT	A	1611.48	PASS	AB=0.872;AC=32;AF=0.615;AN=52;BaseQRankSum=1.717;DP=696;FS=0.683;HRun=0;HaplotypeScore=518.9329;InbreedingCoeff=-0.2898;MQ=25.34;MQ0=161;MQRankSum=1.703;QD=2.75;ReadPosRankSum=-1.552;VQSLOD=-0.1846;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:13:11.32:11,0,62	0/1:11,2:13:1.22:52,0,1	./.	./.	1/1:26,2:28:8.21:60,8,0	0/1:16,3:15:31.15:48,0,31	0/1:16,4:13:7.99:49,0,8	1/1:11,0:6:0.47:2,0,0	0/1:14,3:17:27.81:28,0,50	0/1:55,9:64:75.63:382,0,76	1/1:25,6:31:3:39,3,0	0/1:15,3:18:38.25:43,0,38	0/1:17,2:15:37.79:38,0,48	0/1:19,3:18:17.13:17,0,19	0/1:14,2:15:18.65:24,0,19	1/1:17,2:16:22.08:173,22,0	0/1:14,1:7:5.51:9,0,6	0/0:12,0:3:2.81:0,3,19	1/1:7,0:3:5.36:23,5,0	0/1:45,3:48:18.33:70,0,18	0/0:23,0:3:0.01:0,0,1	1/1:40,9:48:12.69:192,13,0	1/1:28,9:35:4.22:59,4,0	0/0:22,0:14:0.94:0,1,14	1/1:32,3:34:2.81:77,3,0	0/1:34,4:36:53.68:190,0,54	1/1:14,2:16:10.72:97,11,0	0/1:5,1:6:8.18:67,0,8
chr10	98477655	.	TTGCC	T	316.83	PASS	AB=0.991;AC=21;AF=0.404;AN=52;BaseQRankSum=1.319;DP=666;FS=12.999;HRun=0;HaplotypeScore=522.4331;InbreedingCoeff=-0.2395;MQ=25.26;MQ0=157;MQRankSum=0.473;QD=0.63;ReadPosRankSum=-1.958;VQSLOD=-0.3363;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:12:1.65:0,2,39	0/0:12,1:13:3.51:0,4,42	./.	./.	1/1:27,0:27:4.43:24,4,0	0/1:18,1:14:0.30:0,0,69	0/1:22,0:13:18.87:19,0,41	0/0:10,0:6:14.67:0,15,88	0/1:17,0:17:7.11:7,0,75	0/1:60,0:60:82.74:83,0,317	0/1:31,0:31:14.66:22,0,15	0/1:21,0:18:13.06:13,0,86	0/0:19,0:15:1.59:0,2,64	0/1:20,2:17:17.62:18,0,50	0/1:14,0:13:2.86:3,0,32	1/1:18,0:15:16.52:62,17,0	0/1:15,0:7:6:34,0,6	0/0:12,0:3:3.47:0,3,29	0/0:6,0:3:3.88:0,4,70	0/1:47,0:45:16.55:17,0,40	1/1:22,0:3:0.48:2,0,0	0/1:48,0:47:31.33:31,0,41	0/1:35,0:33:6.13:25,0,6	0/0:20,0:12:5.60:0,6,30	0/1:31,0:30:10.01:10,0,11	0/1:37,0:33:32.84:33,0,219	0/1:16,0:16:1.74:54,0,2	0/0:6,0:6:8.21:0,8,47
chr10	98477666	.	A	AT	2211.88	PASS	AB=0.960;AC=33;AF=0.635;AN=52;BaseQRankSum=2.693;DP=879;FS=21.494;HRun=0;HaplotypeScore=598.0447;InbreedingCoeff=-0.4354;MQ=26.03;MQ0=164;MQRankSum=0.703;QD=2.69;ReadPosRankSum=0.432;VQSLOD=-0.0023;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:15:2.81:78,3,0	0/1:14,1:15:20.76:46,0,21	./.	./.	1/1:32,1:34:3.90:23,4,0	0/1:26,0:20:45.27:45,0,50	0/1:30,1:19:36.06:36,0,44	0/1:26,5:28:99:322,0,100	0/1:27,0:25:8.77:76,0,9	0/1:83,2:84:99:135,0,217	0/1:37,0:38:30.01:30,0,31	1/1:27,0:25:20.39:200,20,0	0/1:29,1:24:18.69:96,0,19	1/1:32,0:28:25.23:207,25,0	1/1:22,0:21:9.54:126,10,0	0/1:16,4:17:13.60:145,0,14	0/0:19,0:9:2.29:0,2,46	1/1:12,0:3:4.32:17,4,0	0/1:15,2:11:11.67:131,0,12	0/1:57,1:57:16.61:68,0,17	1/1:30,0:8:3.73:17,4,0	1/1:60,3:64:13.44:156,13,0	0/1:48,0:46:12.75:48,0,13	0/1:21,0:13:0.78:12,0,1	0/1:38,2:40:66.76:80,0,67	0/1:43,0:40:84.54:85,0,119	0/1:17,0:17:1.02:110,0,1	0/1:9,0:9:2.13:65,0,2
chr10	98477675	.	C	CCAT	7523.38	PASS	AB=0.977;AC=42;AF=0.808;AN=52;BaseQRankSum=4.592;DP=890;FS=12.883;HRun=0;HaplotypeScore=591.6899;InbreedingCoeff=-0.2186;MQ=26.01;MQ0=164;MQRankSum=-1.037;QD=8.86;ReadPosRankSum=0.131;VQSLOD=1.6450;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:15:3.53:140,0,4	1/1:10,4:14:17.71:144,18,0	./.	./.	1/1:28,5:35:12.65:133,13,0	0/1:23,1:19:6.52:333,0,7	0/1:30,0:19:46.15:185,0,46	0/1:37,0:32:99:142,0,580	0/1:26,1:25:0.61:255,0,1	0/1:76,5:85:99:1715,0,199	1/1:33,3:39:19.65:167,20,0	1/1:26,1:25:38.51:361,39,0	1/1:28,1:24:21.48:322,21,0	1/1:30,0:26:18.35:184,18,0	1/1:21,1:21:30.14:218,30,0	1/1:17,3:17:2.39:147,2,0	0/1:16,0:9:42.10:42,0,77	1/1:9,0:2:1.57:5,2,0	0/1:22,0:14:99:128,0,136	1/1:49,9:59:50.19:398,50,0	1/1:34,0:10:5.64:21,6,0	1/1:57,6:64:65.26:729,65,0	1/1:44,3:48:25.48:262,25,0	1/1:18,1:12:10.17:69,10,0	1/1:36,3:39:42.86:333,43,0	0/1:36,3:41:99:732,0,187	0/1:19,0:17:28.83:214,0,29	1/1:7,2:9:10.69:144,11,0
chr10	98477677	.	CA	C	3584.72	PASS	AB=0.963;AC=37;AF=0.712;AN=52;BaseQRankSum=3.762;DP=884;FS=51.083;HRun=1;HaplotypeScore=582.3614;InbreedingCoeff=-0.4389;MQ=26.06;MQ0=160;MQRankSum=-0.377;QD=4.24;ReadPosRankSum=-2.860;VQSLOD=0.5847;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:14:21.95:73,0,22	1/1:11,3:14:18.83:143,19,0	./.	./.	1/1:25,8:35:3.59:52,4,0	0/1:23,2:19:15.43:144,0,15	0/1:31,1:19:50.84:112,0,51	0/1:36,0:32:41.48:41,0,638	0/1:25,1:25:29.77:92,0,30	0/1:72,12:85:99:518,0,476	1/1:29,9:39:23.48:191,23,0	0/1:27,0:25:9.09:127,0,9	0/1:28,1:24:53.82:54,0,74	0/1:29,1:26:39.73:77,0,40	0/1:21,0:20:10.08:65,0,10	0/1:18,0:16:55.57:77,0,56	0/1:16,0:9:10.88:11,0,133	1/1:9,0:2:2.74:13,3,0	0/1:25,0:15:31.64:32,0,196	1/1:47,13:59:49.93:300,50,0	1/1:32,0:10:3.07:7,3,0	1/1:53,13:64:58.77:499,59,0	1/1:36,13:48:37.55:260,38,0	1/1:18,1:12:1.91:19,2,0	1/1:30,9:39:11.96:329,12,0	0/1:36,7:41:99:255,0,396	0/1:14,2:17:31.42:31,0,46	1/1:7,1:9:3.43:62,3,0
chr10	98477679	.	CA	C	2389.86	PASS	AB=0.965;AC=31;AF=0.596;AN=52;BaseQRankSum=-1.810;DP=878;FS=49.152;HRun=1;HaplotypeScore=586.6023;InbreedingCoeff=-0.3820;MQ=26.09;MQ0=157;MQRankSum=-1.340;QD=2.94;ReadPosRankSum=-1.177;VQSLOD=0.3594;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:14:6.35:6,0,70	0/1:13,1:14:0.37:59,0,0	./.	./.	1/1:29,5:34:11.11:74,11,0	0/1:24,0:18:44.31:96,0,44	0/1:31,0:19:52.65:53,0,73	0/1:37,4:36:91.64:92,0,765	0/1:27,0:25:56.10:56,0,94	0/1:81,7:84:99:389,0,464	1/1:37,2:39:21.25:149,21,0	0/1:26,1:25:38.22:38,0,61	0/1:29,0:24:58.53:82,0,59	0/1:30,0:26:20:20,0,43	0/1:21,0:20:17:43,0,17	0/1:18,0:16:47.17:47,0,99	0/1:16,0:9:7.20:7,0,155	0/0:9,0:2:2.37:0,2,8	0/1:22,3:15:42.10:42,0,240	1/1:59,2:59:21.42:262,21,0	1/1:29,0:8:1.73:4,2,0	1/1:62,4:64:17.20:396,17,0	1/1:45,4:47:34.43:185,34,0	0/0:19,0:12:5.20:0,5,26	0/1:36,5:39:4.74:269,0,5	0/1:40,3:41:99:121,0,440	0/1:18,1:17:33:33,0,40	1/1:8,0:8:0.15:13,0,0
chr10	98477681	.	CA	C	3405.73	PASS	AB=0.861;AC=30;AF=0.577;AN=52;BaseQRankSum=-2.152;DP=872;FS=59.317;HRun=1;HaplotypeScore=580.9602;InbreedingCoeff=-0.5962;MQ=26.16;MQ0=152;MQRankSum=-1.702;QD=4.11;ReadPosRankSum=-0.381;VQSLOD=0.5597;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,1:14:14.32:14,0,85	0/1:7,7:14:4.27:63,0,4	./.	./.	1/1:24,8:34:11.37:55,11,0	0/1:19,5:18:54.56:139,0,55	0/1:28,3:19:73.69:131,0,74	0/1:39,2:36:99:129,0,757	0/1:22,5:25:99:118,0,115	0/1:64,19:84:99:748,0,389	1/1:27,11:39:21.91:137,22,0	0/1:23,4:25:67.80:92,0,68	0/1:24,4:24:41.60:153,0,42	0/1:23,5:25:39.85:48,0,40	0/1:18,3:20:23.33:113,0,23	0/1:12,6:16:60.36:60,0,81	0/1:15,0:8:31.53:32,0,134	0/0:9,0:2:3.93:0,4,12	0/1:22,4:16:79.30:79,0,256	0/1:46,14:59:6.36:199,0,6	1/1:29,0:8:1.40:4,1,0	0/1:48,18:64:2.58:275,0,3	1/1:34,14:47:22.80:183,23,0	0/1:18,1:12:22.42:22,0,26	0/1:34,6:39:18.88:215,0,19	0/1:35,8:41:99:289,0,394	0/1:13,3:17:53.93:77,0,54	1/1:5,2:8:0.43:29,0,0
chr10	98477683	.	CA	C	2238.93	PASS	AB=0.979;AC=28;AF=0.538;AN=52;BaseQRankSum=-4.570;DP=860;FS=57.780;HRun=1;HaplotypeScore=579.3466;InbreedingCoeff=-0.4829;MQ=26.21;MQ0=147;MQRankSum=-0.588;QD=2.85;ReadPosRankSum=-0.199;VQSLOD=0.4511;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,7:14:28.15:28,0,33	0/1:14,0:14:12.22:23,0,12	./.	./.	1/1:34,0:34:6.21:49,6,0	0/1:23,0:18:54.42:72,0,54	0/1:29,1:18:57.94:92,0,58	0/1:38,2:35:99:133,0,676	0/1:26,1:25:84.32:115,0,84	0/1:86,1:83:99:268,0,393	1/1:39,0:39:18.38:135,18,0	0/1:26,0:24:35.89:126,0,36	0/1:29,0:24:44.02:172,0,44	0/1:29,0:25:3.01:99,0,3	0/1:21,0:20:3.61:157,0,4	0/0:18,0:16:0.22:0,0,53	0/1:15,0:8:45.06:45,0,97	0/0:7,1:1:1.82:0,2,5	0/1:26,0:16:11.58:12,0,257	0/1:60,0:58:29.69:146,0,30	1/1:29,0:8:1.40:4,1,0	1/1:66,0:64:2.89:239,3,0	1/1:48,1:47:0.76:71,1,0	0/0:19,0:12:0.25:0,0,13	0/1:39,2:39:37.76:206,0,38	0/1:42,1:41:99:170,0,385	0/1:18,0:16:0.21:0,0,60	0/1:8,0:8:5.99:12,0,6
chr10	98477685	.	CA	C	2277.87	PASS	AB=0.904;AC=33;AF=0.635;AN=52;BaseQRankSum=-3.293;DP=853;FS=48.108;HRun=1;HaplotypeScore=575.1859;InbreedingCoeff=-0.3772;MQ=26.16;MQ0=148;MQRankSum=-0.450;QD=2.86;ReadPosRankSum=-2.663;VQSLOD=0.1676;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:14:6.71:96,7,0	0/1:13,1:14:11.08:67,0,11	./.	./.	0/1:32,1:34:1.02:20,0,1	0/1:19,4:18:55.97:69,0,56	0/1:25,5:18:72.42:89,0,72	0/1:41,0:35:54.82:55,0,521	0/1:22,5:25:23.27:146,0,23	0/1:78,7:82:99:191,0,536	1/1:34,1:38:13.58:136,14,0	1/1:18,7:24:22.61:225,23,0	0/1:26,3:24:37.92:139,0,38	1/1:25,4:25:29.45:194,29,0	1/1:17,4:20:30.55:210,31,0	0/1:17,1:16:18.75:19,0,59	0/1:11,4:8:53.43:53,0,64	1/1:8,0:1:2.80:13,3,0	0/0:26,2:16:14.42:0,14,256	1/1:52,4:57:4.55:107,5,0	1/1:26,3:8:1.50:4,1,0	0/1:60,2:64:5.46:201,0,5	0/1:45,2:47:23.85:60,0,24	0/1:11,8:12:13.17:15,0,13	0/1:35,2:37:25.41:191,0,25	0/1:34,7:40:94.66:95,0,379	0/1:16,2:16:4.58:5,0,64	0/1:6,0:6:6.98:28,0,7
chr10	98477687	.	CACA	C	4975.54	PASS	AB=0.906;AC=35;AF=0.673;AN=52;BaseQRankSum=-5.381;DP=855;FS=10.866;HRun=0;HaplotypeScore=577.0231;InbreedingCoeff=-0.5157;MQ=26.12;MQ0=151;MQRankSum=0.778;QD=6.02;ReadPosRankSum=-0.210;VQSLOD=0.9759;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:14:13.63:124,14,0	0/1:12,2:14:46.95:93,0,47	./.	./.	1/1:25,6:34:0.54:37,1,0	0/1:20,2:17:81.65:82,0,106	0/1:29,1:18:99:128,0,136	0/1:42,0:35:99:385,0,311	0/1:26,0:25:12.93:365,0,13	0/1:70,7:82:99:660,0,480	1/1:29,8:38:22.48:189,22,0	1/1:25,0:24:5.35:357,5,0	0/1:29,0:24:34.19:352,0,34	1/1:28,0:25:29.01:291,29,0	1/1:21,0:20:27.08:350,27,0	0/1:18,0:16:44.63:159,0,45	0/1:15,0:8:73.63:137,0,74	1/1:8,0:1:2.80:13,3,0	0/1:31,0:16:82.99:127,0,83	1/1:44,12:57:19.62:205,20,0	1/1:28,0:8:0.34:2,0,0	0/1:56,9:64:8.89:227,0,9	0/1:36,11:47:56.40:64,0,56	0/1:18,0:12:13.25:61,0,13	0/1:28,9:37:35.52:207,0,36	0/1:35,5:40:99:310,0,234	0/1:13,1:16:20.11:20,0,69	0/1:4,1:6:17.74:30,0,18
chr10	98477689	.	CA	C	5471.28	PASS	AB=0.889;AC=40;AF=0.769;AN=52;BaseQRankSum=-2.126;DP=847;FS=19.495;HRun=1;HaplotypeScore=559.7746;InbreedingCoeff=-0.3296;MQ=26.14;MQ0=148;MQRankSum=0.205;QD=6.70;ReadPosRankSum=0.153;VQSLOD=1.9715;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,2:14:13.33:148,13,0	0/1:12,2:14:17.88:92,0,18	./.	./.	1/1:27,7:34:3.29:45,3,0	0/1:18,4:17:57:123,0,57	0/1:25,4:18:61.81:117,0,62	0/1:27,14:35:99:525,0,227	1/1:21,6:25:30.81:369,31,0	0/1:68,14:79:99:676,0,219	1/1:33,5:38:22.55:147,23,0	1/1:18,7:24:38.73:392,39,0	1/1:21,8:24:29.66:410,30,0	1/1:22,6:24:30.58:290,31,0	1/1:13,8:20:24.93:339,25,0	0/1:18,0:16:19.69:139,0,20	0/1:13,2:8:40.03:127,0,40	1/1:6,0:1:3:26,3,0	0/1:28,2:15:32.94:157,0,33	1/1:50,9:57:33.68:247,34,0	1/1:27,1:8:1.49:4,1,0	1/1:50,16:64:28.38:317,28,0	0/1:42,7:47:9:65,0,9	0/1:17,1:12:10.64:62,0,11	1/1:34,5:37:1.77:252,2,0	0/1:36,6:40:99:359,0,159	0/1:17,1:16:21.28:21,0,25	1/1:6,0:6:1.53:22,2,0
chr10	98477690	.	A	AC	6575.30	PASS	AB=0.992;AC=46;AF=0.885;AN=52;BaseQRankSum=1.672;DP=841;FS=2.260;HRun=1;HaplotypeScore=557.6376;InbreedingCoeff=-0.0972;MQ=26.14;MQ0=147;MQRankSum=-1.125;QD=8.11;ReadPosRankSum=0.859;VQSLOD=2.0073;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:14:22.80:247,23,0	0/1:14,0:14:4.27:112,0,4	./.	./.	1/1:33,1:34:3.77:50,4,0	0/1:22,0:17:45.36:171,0,45	0/1:30,0:18:41.51:67,0,42	0/1:38,0:33:99:555,0,127	1/1:27,0:25:46.98:416,47,0	1/1:83,0:79:81.13:993,81,0	1/1:37,1:38:24.85:157,25,0	1/1:25,0:24:44.98:469,45,0	1/1:27,1:24:38.93:428,39,0	1/1:28,0:24:36.26:352,36,0	1/1:21,0:20:30.70:355,31,0	1/1:18,0:16:15.19:136,15,0	0/1:15,0:8:8.89:120,0,9	1/1:6,0:1:3.01:53,3,0	1/1:29,0:14:0.63:222,1,0	1/1:58,0:56:39.54:311,40,0	0/1:28,0:8:1.04:2,0,1	1/1:63,2:63:40.95:322,41,0	1/1:49,0:47:4.19:72,4,0	1/1:18,0:12:0.55:56,1,0	1/1:39,0:37:8.57:286,9,0	1/1:42,0:40:17.66:525,18,0	1/1:18,0:16:9.88:63,10,0	1/1:6,0:6:5.79:34,6,0
chr10	98477693	.	C	CCAT	11882.21	PASS	AB=0.988;AC=48;AF=0.923;AN=52;BaseQRankSum=3.782;DP=823;FS=0.958;HRun=0;HaplotypeScore=559.2510;InbreedingCoeff=-0.0772;MQ=26.18;MQ0=141;MQRankSum=0.420;QD=15.04;ReadPosRankSum=2.486;VQSLOD=4.4155;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:14:24.86:347,25,0	1/1:14,0:14:12.03:171,12,0	./.	./.	1/1:33,0:33:7.62:98,8,0	0/1:21,0:17:35.80:236,0,36	0/1:27,0:17:53.48:98,0,53	0/1:37,2:32:79.08:849,0,79	1/1:26,0:24:55.72:711,56,0	1/1:81,1:78:99:2322,198,0	1/1:38,0:38:21.29:193,21,0	1/1:25,0:24:55.57:792,56,0	1/1:27,1:23:57.74:731,58,0	1/1:26,0:24:47.97:615,48,0	1/1:20,0:19:43.43:588,43,0	1/1:14,4:16:35.03:384,35,0	0/1:15,0:8:6.51:170,0,7	1/1:5,0:1:3.01:54,3,0	1/1:22,6:13:11.56:424,12,0	1/1:58,0:56:52.93:472,53,0	1/1:27,0:7:4.05:10,4,0	1/1:63,0:62:46.09:559,46,0	1/1:49,0:47:11.18:110,11,0	1/1:17,0:12:9.99:97,10,0	1/1:36,1:35:38.51:396,39,0	1/1:41,0:40:70.62:1124,71,0	1/1:18,0:16:25.33:236,25,0	1/1:6,0:6:10.77:96,11,0
chr10	98477947	.	CAT	C	43.51	PASS	AB=0.769;AC=3;AF=0.054;AN=56;BaseQRankSum=6.607;DP=1054;FS=3.050;HRun=0;HaplotypeScore=279.5649;InbreedingCoeff=-0.0565;MQ=45.30;MQ0=11;MQRankSum=-5.462;QD=0.48;ReadPosRankSum=-0.463;VQSLOD=2.2578;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,8:38:45.51:46,0,267	0/0:12,0:12:10.92:0,11,411	0/0:50,0:13:31.64:0,32,407	0/0:44,0:17:33.85:0,34,550	0/0:34,0:37:73.26:0,73,1160	0/0:27,0:27:66.21:0,66,1213	0/0:34,0:34:93.22:0,93,1593	0/0:43,0:40:96.53:0,97,1667	0/0:34,0:34:66.14:0,66,1180	0/0:56,0:59:99:0,140,2621	0/0:22,0:23:35.12:0,35,573	0/0:35,0:35:81.14:0,81,1421	0/0:35,0:35:98.95:0,99,1621	0/0:37,0:37:78.16:0,78,1377	0/0:39,0:39:96.28:0,96,1711	0/1:12,17:29:25.99:52,0,26	0/0:37,0:36:96.16:0,96,1590	0/1:19,4:23:45.79:46,0,652	0/0:19,0:18:54.12:0,54,907	0/0:35,0:37:70.61:0,71,1001	0/0:106,0:105:99:0,259,4443	0/0:29,0:32:56.16:0,56,800	0/0:41,0:43:78.91:0,79,1289	0/0:49,0:49:99:0,100,2023	0/0:45,0:52:90.39:0,90,1359	0/0:36,0:35:99:0,100,1489	0/0:31,0:31:75.10:0,75,1297	0/0:11,0:12:35.90:0,36,569
chr10	98479328	.	AG	A	449.41	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.879;DP=604;FS=1.014;HRun=1;HaplotypeScore=58.1062;InbreedingCoeff=0.9840;MQ=71.05;MQ0=1;MQRankSum=0.715;QD=29.96;ReadPosRankSum=0.794;VQSLOD=3.3467;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1597	0/0:5,0:5:15.03:0,15,215	0/0:25,0:23:56.62:0,57,779	0/0:23,0:22:56.11:0,56,815	0/0:29,0:29:87.30:0,87,1380	0/0:15,0:15:45.14:0,45,693	0/0:24,0:24:72.23:0,72,1122	0/0:29,0:29:87.25:0,87,1284	0/0:22,0:22:66.20:0,66,1005	0/0:27,0:27:81.26:0,81,1227	0/0:16,0:16:45.14:0,45,681	0/0:29,0:29:87.30:0,87,1383	0/0:23,0:23:69.24:0,69,1095	0/0:13,0:13:39.13:0,39,617	0/0:23,0:23:69.24:0,69,1099	1/1:0,15:15:39.13:544,39,0	0/0:41,0:41:99:0,123,1908	0/0:28,0:28:84.22:0,84,1276	0/0:17,0:16:51.17:0,51,790	0/0:16,0:16:48.14:0,48,718	0/0:17,0:17:51.16:0,51,788	0/0:16,0:16:48.16:0,48,761	0/0:17,0:17:51.16:0,51,786	0/0:22,0:22:66.21:0,66,1027	0/0:14,0:14:33.08:0,33,478	0/0:26,0:26:78.21:0,78,1134	0/0:21,0:21:63.19:0,63,979	0/0:15,0:15:39.07:0,39,546
chr10	98481228	.	GTAAC	G	1384.69	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.307;DP=728;FS=0.712;HRun=0;HaplotypeScore=118.7902;InbreedingCoeff=0.9949;MQ=72.24;MQ0=1;MQRankSum=-1.939;QD=49.45;ReadPosRankSum=-0.095;VQSLOD=4.3265;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,3342	0/0:9,0:9:27.09:0,27,728	0/0:20,0:20:40.64:0,41,1164	0/0:25,0:21:51.95:0,52,1140	0/0:24,0:24:66.23:0,66,1721	0/0:20,0:20:57.20:0,57,1536	0/0:28,0:28:78.27:0,78,2102	0/0:30,0:30:84.29:0,84,2238	0/0:24,0:24:69.20:0,69,1717	0/0:30,0:30:87.30:0,87,2346	0/0:21,0:21:60.21:0,60,1589	0/0:38,0:38:99:0,111,2911	0/0:25,0:25:75.26:0,75,2022	0/0:31,0:31:90.31:0,90,2404	0/0:32,0:32:96.33:0,96,2570	1/1:2,24:28:78.27:1480,78,0	0/0:28,0:28:78.27:0,78,2101	0/0:18,0:18:48.16:0,48,1286	0/0:27,0:26:72.23:0,72,1852	0/0:29,0:29:81.28:0,81,2179	0/0:30,0:30:90.29:0,90,2315	0/0:34,0:34:96.33:0,96,2571	0/0:17,0:17:45.15:0,45,1211	0/0:32,0:32:93.32:0,93,2467	0/0:26,0:26:69.22:0,69,1800	0/0:28,0:28:84.12:0,84,2194	0/0:23,0:23:69.24:0,69,1819	0/0:7,0:7:21.07:0,21,566
chr10	98481712	.	C	CG	1190.28	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.376;DP=395;FS=1.408;HRun=5;HaplotypeScore=36.2768;InbreedingCoeff=0.9780;MQ=79.17;MQ0=0;MQRankSum=-2.337;QD=28.34;ReadPosRankSum=0.998;VQSLOD=3.2484;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:16:39.12:504,39,0	0/0:11,0:11:30.07:0,30,319	0/0:8,0:8:15.03:0,15,161	0/0:11,0:11:16.07:0,16,186	0/0:24,0:24:66.12:0,66,694	0/0:16,0:16:48.12:0,48,515	0/0:8,0:8:24.06:0,24,258	0/0:22,0:22:51.12:0,51,541	0/0:8,0:8:24.06:0,24,257	0/0:17,0:17:50.96:0,51,528	0/0:21,0:21:63.11:0,63,655	0/0:6,0:6:18.05:0,18,193	0/0:13,0:13:36.09:0,36,386	0/0:6,0:6:18.05:0,18,193	0/0:15,0:15:45.02:0,45,450	1/1:0,12:12:33.11:434,33,0	0/0:10,0:10:24.06:0,24,257	1/1:3,11:14:30.10:395,30,0	0/0:18,0:18:54.04:0,54,547	0/0:27,0:27:72.17:0,72,764	0/0:6,0:6:18.03:0,18,186	0/0:9,0:9:27.06:0,27,283	0/0:13,0:13:39.10:0,39,419	0/0:9,0:9:27.03:0,27,277	0/0:13,0:13:36.09:0,36,386	0/0:26,0:26:69.17:0,69,740	0/0:23,0:23:66.17:0,66,708	0/0:13,0:13:39.10:0,39,418
chr10	98481923	.	TACACACACACAAACACACACACACACACACACACACAC	T	1175.21	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.998;DP=461;FS=2.648;HRun=0;HaplotypeScore=366.5812;InbreedingCoeff=0.8956;MQ=83.72;MQ0=10;MQRankSum=-1.687;QD=26.12;ReadPosRankSum=0.762;VQSLOD=1.1773;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:11.84:87,12,0	0/0:5,0:5:9.02:0,9,477	0/0:32,0:25:28.10:0,28,1269	0/0:37,0:32:47.24:0,47,1615	0/0:9,0:9:21.06:0,21,1301	0/0:21,0:21:53.92:0,54,4519	0/0:23,0:23:55.36:0,55,3755	0/0:20,0:19:48.13:0,48,1727	0/0:9,0:9:18.02:0,18,1111	0/0:16,0:16:30.08:0,30,2399	0/0:10,0:10:21.06:0,21,1971	0/0:13,0:12:33.10:0,33,2908	0/0:11,0:11:24:0,24,2539	0/0:8,0:8:12.93:0,13,898	0/0:15,0:15:36.07:0,36,3938	1/1:3,19:22:11.80:1157,12,0	0/0:36,0:35:84.60:0,85,7282	1/1:6,0:5:8.89:59,9,0	0/0:16,0:16:30.07:0,30,2083	0/0:8,0:8:24.08:0,24,2740	0/0:41,0:38:95.05:0,95,7469	0/0:12,0:12:32.52:0,33,1751	0/0:8,0:8:21.05:0,21,1403	0/0:27,0:27:57.12:0,57,6283	0/0:12,0:12:24.80:0,25,1660	0/0:10,0:10:30.08:0,30,2631	0/0:13,0:11:27.03:0,27,1478	0/0:4,0:3:9.03:0,9,927
chr10	98481935	.	AACAC	A	1274.91	PASS	AB=0.733;AC=29;AF=0.630;AN=46;BaseQRankSum=2.881;DP=448;FS=1.244;HRun=0;HaplotypeScore=86.6314;InbreedingCoeff=0.4128;MQ=60.59;MQ0=13;MQRankSum=0.688;QD=4.54;ReadPosRankSum=0.200;VQSLOD=1.9164;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:3,0:3:3.01:0,3,67	./.	./.	0/0:10,0:9:3.01:0,3,67	1/1:21,1:20:5.95:64,6,0	0/0:19,0:22:4.92:0,5,23	./.	1/1:9,1:10:8.60:73,9,0	0/0:12,0:12:9.03:0,9,150	0/0:10,0:10:9.01:0,9,157	1/1:13,0:13:6.01:73,6,0	1/1:7,3:10:2.59:46,3,0	0/1:7,4:11:10.57:65,0,11	1/1:10,8:18:9.03:140,9,0	1/1:19,0:19:12.01:112,12,0	1/1:25,12:36:2.08:260,2,0	./.	1/1:12,1:13:3.01:46,3,0	0/0:9,0:9:3.01:0,3,42	1/1:50,0:47:0.43:65,0,0	1/1:13,0:13:6.48:75,6,0	0/0:7,0:7:3.01:0,3,64	1/1:17,15:31:14.78:232,15,0	1/1:11,2:13:3.48:48,3,0	0/0:11,0:11:0:0,0,0	1/1:14,0:12:5.94:86,6,0	1/1:5,0:4:3.01:30,3,0
chr10	98482418	.	TAC	T	484.79	PASS	AB=0.944;AC=3;AF=0.054;AN=56;BaseQRankSum=5.653;DP=698;FS=11.366;HRun=0;HaplotypeScore=91.1309;InbreedingCoeff=0.7282;MQ=65.75;MQ0=4;MQRankSum=0.684;QD=12.76;ReadPosRankSum=-0.762;VQSLOD=2.3168;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:90.31:0,90,1518	0/0:12,0:12:33.11:0,33,557	0/0:32,0:23:49.87:0,50,799	0/0:38,0:30:60.87:0,61,1068	0/0:20,1:21:21.61:0,22,878	0/0:23,0:23:57.19:0,57,943	0/0:30,0:30:72.23:0,72,1178	0/0:31,1:32:44.97:0,45,1224	0/0:22,0:22:54.16:0,54,844	0/0:19,0:18:13.34:0,13,744	0/0:21,0:21:51.17:0,51,837	0/0:18,0:18:42.12:0,42,669	0/0:20,0:20:45.15:0,45,748	0/0:23,1:24:27.67:0,28,1011	0/0:27,0:26:72.25:0,72,1192	1/1:4,17:21:45.08:579,45,0	0/0:40,0:40:99:0,114,1887	0/0:25,0:25:69.12:0,69,1082	0/0:12,0:12:24.08:0,24,403	0/0:19,0:19:51.17:0,51,850	0/0:40,0:40:99:0,104,1720	0/0:34,0:34:87.30:0,87,1462	0/1:16,1:17:2.50:3,0,487	0/0:40,0:40:99:0,108,1799	0/0:22,0:22:51.17:0,51,838	0/0:21,0:21:57.19:0,57,950	0/0:20,0:20:51.17:0,51,856	0/0:12,0:12:36.09:0,36,562
chr10	98484004	.	T	TA	481.50	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=8.761;DP=603;FS=5.320;HRun=10;HaplotypeScore=71.2793;InbreedingCoeff=0.5401;MQ=68.18;MQ0=1;MQRankSum=-1.700;QD=4.86;ReadPosRankSum=-1.097;VQSLOD=0.8645;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:21.57:203,22,0	0/1:3,0:3:12.49:12,0,40	0/1:21,0:12:3.03:3,0,81	0/1:12,0:10:10.53:11,0,34	0/0:29,1:30:51.91:0,52,633	0/0:32,0:32:89.89:0,90,739	0/0:17,0:17:38.86:0,39,310	0/0:31,0:31:65.89:0,66,540	0/0:16,0:16:33.40:0,33,269	0/0:26,0:26:53.92:0,54,443	0/0:17,0:17:38.92:0,39,314	0/0:18,1:19:6.95:0,7,263	0/0:19,0:19:41.91:0,42,345	0/0:15,0:15:35.93:0,36,296	0/0:15,0:16:40.99:0,41,326	1/1:16,0:16:0.72:146,1,0	0/0:13,0:13:29.92:0,30,240	1/1:21,0:21:43.20:248,43,0	0/0:20,0:20:9.96:0,10,266	0/0:30,0:30:80.88:0,81,662	0/0:17,0:19:43.98:0,44,351	0/0:18,0:18:44.93:0,45,369	0/0:19,1:20:27.95:0,28,436	0/0:24,1:25:36.94:0,37,510	0/0:31,0:31:77.84:0,78,634	0/0:26,0:26:59.90:0,60,492	0/0:41,3:44:83.88:0,84,879	0/0:19,0:20:52.96:0,53,422
chr10	98484012	.	AAAC	A	741.28	PASS	AB=0.976;AC=7;AF=0.125;AN=56;BaseQRankSum=10.181;DP=578;FS=5.243;HRun=0;HaplotypeScore=89.3227;InbreedingCoeff=0.5481;MQ=64.50;MQ0=1;MQRankSum=-1.829;QD=9.63;ReadPosRankSum=-1.574;VQSLOD=2.6173;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:30,1:31:14.26:353,14,0	0/1:4,0:4:9.47:9,0,159	0/0:19,0:10:19.31:0,19,222	0/1:10,0:8:3.24:3,0,133	0/0:31,0:31:93.25:0,93,1672	0/0:33,0:33:96.29:0,96,1834	0/0:17,0:17:50.98:0,51,886	0/0:30,0:30:84.23:0,84,1441	0/0:17,0:17:42.97:0,43,784	0/0:22,0:22:63.18:0,63,1119	0/0:15,0:15:42.12:0,42,787	0/0:16,0:16:45.09:0,45,789	0/0:19,0:19:57.16:0,57,1047	0/0:15,0:15:42.10:0,42,734	0/0:15,0:15:45.08:0,45,807	0/1:12,1:13:21.04:155,0,21	0/0:12,0:12:36.04:0,36,603	1/1:17,2:19:45.18:354,45,0	0/0:17,0:17:47.59:0,48,819	0/0:30,0:30:90.28:0,90,1660	0/0:18,0:18:50.81:0,51,889	0/0:16,0:16:48.16:0,48,899	0/0:21,0:21:63.21:0,63,1188	0/0:26,0:26:78.21:0,78,1414	0/0:28,0:28:84.27:0,84,1612	0/0:24,0:24:72.21:0,72,1304	0/0:41,0:41:99:0,116,2160	0/0:19,0:19:54.17:0,54,1026
chr10	98484014	.	AC	A	771.48	PASS	AB=0.882;AC=7;AF=0.125;AN=56;BaseQRankSum=11.583;DP=575;FS=14.212;HRun=1;HaplotypeScore=65.2455;InbreedingCoeff=0.5730;MQ=64.54;MQ0=1;MQRankSum=-3.843;QD=10.43;ReadPosRankSum=-1.913;VQSLOD=-0.2106;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:55.28:352,55,0	0/1:4,0:4:9.51:10,0,87	0/0:18,1:10:13.62:0,14,149	0/1:10,0:8:30.04:30,0,84	0/0:31,0:31:93.10:0,93,1090	0/0:33,0:33:96.25:0,96,1165	0/0:17,0:17:50.87:0,51,556	0/0:31,0:31:82.18:0,82,1000	0/0:16,0:16:27.92:0,28,482	0/0:22,0:22:63.12:0,63,732	0/0:14,0:14:42.12:0,42,511	0/0:15,0:15:44.78:0,45,511	0/0:20,0:20:60.14:0,60,709	0/0:15,0:15:45.09:0,45,522	0/0:15,0:15:40.90:0,41,507	0/1:5,6:11:4.40:262,0,4	0/0:12,0:12:36.03:0,36,401	1/1:17,0:19:45.74:260,46,0	0/0:16,1:16:20.51:0,21,507	0/0:30,0:30:89.72:0,90,1026	0/0:18,0:18:46.63:0,47,561	0/0:16,0:16:48.07:0,48,580	0/0:21,0:21:63.05:0,63,745	0/0:26,0:26:78.06:0,78,890	0/0:28,0:28:84.24:0,84,1025	0/0:24,0:24:72.10:0,72,824	0/0:42,0:42:99:0,100,1381	0/0:19,0:19:50.11:0,50,612
chr10	98484015	.	CA	C	726.35	PASS	AB=0.917;AC=7;AF=0.125;AN=56;BaseQRankSum=11.355;DP=575;FS=14.116;HRun=10;HaplotypeScore=65.6436;InbreedingCoeff=0.7694;MQ=65.40;MQ0=1;MQRankSum=-2.128;QD=10.53;ReadPosRankSum=-0.955;VQSLOD=0.9161;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,6:30:36.95:484,37,0	0/0:3,0:3:9.03:0,9,125	0/0:19,0:10:17.94:0,18,178	0/1:10,1:9:18.49:18,0,110	0/0:31,0:31:90.30:0,90,1250	0/0:33,0:33:93.31:0,93,1295	0/0:17,0:17:48.14:0,48,644	0/0:31,0:31:90.13:0,90,1219	0/0:15,0:15:25.32:0,25,563	0/0:22,0:22:60.19:0,60,812	0/0:15,0:15:45.13:0,45,592	0/0:17,0:17:51.14:0,51,670	0/0:20,0:20:60.20:0,60,832	0/0:15,0:15:42.14:0,42,580	0/0:15,0:15:45.11:0,45,583	1/1:10,1:11:4.34:145,4,0	0/0:11,0:11:33.11:0,33,458	1/1:17,0:17:36.63:219,37,0	0/0:18,0:17:37.22:0,37,635	0/0:30,0:30:84.28:0,84,1160	0/0:18,0:18:51.15:0,51,683	0/0:16,0:16:45.15:0,45,623	0/0:21,0:21:63.21:0,63,875	0/0:26,0:26:72.24:0,72,1004	0/0:28,0:28:81.27:0,81,1125	0/0:24,0:24:66.22:0,66,918	0/0:42,0:42:99:0,111,1541	0/0:19,0:19:54.17:0,54,734
chr10	98484017	.	A	ACC	1257.55	PASS	AB=0.625;AC=5;AF=0.089;AN=56;BaseQRankSum=11.187;DP=572;FS=12.302;HRun=0;HaplotypeScore=75.6829;InbreedingCoeff=0.7121;MQ=63.74;MQ0=1;MQRankSum=-3.455;QD=22.46;ReadPosRankSum=-0.940;VQSLOD=3.1950;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:31:36.31:684,36,0	0/0:3,0:3:9.03:0,9,147	0/0:18,0:9:23.94:0,24,303	0/0:11,0:9:3.18:0,3,147	0/0:31,0:31:90.31:0,90,1468	0/0:32,0:32:93.32:0,93,1518	0/0:17,0:17:51.16:0,51,796	0/0:32,0:32:90.31:0,90,1464	0/0:15,0:15:42.14:0,42,685	0/0:22,0:22:60.20:0,60,976	0/0:16,0:16:48.15:0,48,755	0/0:17,0:17:51.17:0,51,827	0/0:20,0:20:60.20:0,60,977	0/0:14,0:14:42.14:0,42,684	0/0:16,0:16:48.16:0,48,759	0/1:4,6:10:16.51:302,0,17	0/0:12,0:12:33.11:0,33,538	1/1:14,0:15:40.86:400,41,0	0/0:18,0:17:50.96:0,51,795	0/0:30,0:30:87.28:0,87,1395	0/0:18,0:18:51.17:0,51,832	0/0:15,0:15:45.15:0,45,732	0/0:22,0:22:66.21:0,66,1053	0/0:27,0:27:81.24:0,81,1251	0/0:27,0:27:81.28:0,81,1322	0/0:23,0:23:69.22:0,69,1101	0/0:41,0:41:99:0,114,1836	0/0:19,0:19:54.18:0,54,881
chr10	98484605	.	TACACACAC	T	144.15	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=2.816;DP=508;FS=0.000;HRun=0;HaplotypeScore=113.8053;InbreedingCoeff=0.6814;MQ=56.11;MQ0=26;MQRankSum=-2.887;QD=2.57;ReadPosRankSum=0.629;VQSLOD=1.6566;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,15:38:6.02:94,6,0	0/0:6,0:6:12.04:0,12,454	./.	./.	0/0:17,0:21:20.95:0,21,692	0/0:18,0:18:24.08:0,24,666	0/0:20,0:20:21.07:0,21,729	0/0:17,0:16:19.81:0,20,494	0/0:7,0:7:9.03:0,9,354	0/0:15,0:14:27.09:0,27,925	0/0:17,0:17:24.08:0,24,861	0/0:7,0:7:6.02:0,6,229	0/0:6,0:7:6.49:0,6,187	0/0:17,0:17:9.48:0,9,283	0/0:15,0:15:18.04:0,18,573	0/0:21,0:21:9.50:0,10,290	0/0:31,0:29:63.03:0,63,1874	1/1:10,8:18:6.02:150,6,0	0/0:19,0:19:21.58:0,22,500	0/0:23,0:21:24.08:0,24,942	0/0:19,0:18:27.09:0,27,900	0/0:22,0:22:27.08:0,27,876	0/0:15,0:15:21.07:0,21,801	0/0:15,0:15:21.07:0,21,768	0/0:15,0:15:12.04:0,12,277	0/0:22,0:21:27.97:0,28,809	0/0:14,0:14:21.07:0,21,739	0/0:17,0:15:21.02:0,21,674
chr10	98484635	.	C	CACAC	402.83	PASS	AB=0.936;AC=11;AF=0.204;AN=54;BaseQRankSum=0.867;DP=551;FS=0.000;HRun=0;HaplotypeScore=85.2143;InbreedingCoeff=0.4435;MQ=52.08;MQ0=24;MQRankSum=-0.981;QD=2.86;ReadPosRankSum=0.298;VQSLOD=1.6096;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:3:0,3,28	0/0:9,0:9:3:0,3,45	./.	0/1:15,0:2:0:0,0,0	0/0:22,0:22:15.01:0,15,185	0/0:22,0:22:8.76:0,9,96	0/0:22,0:21:11.99:0,12,120	1/1:29,0:27:3.63:10,4,0	0/0:11,0:11:5.66:0,6,67	0/0:20,0:18:5.96:0,6,71	0/0:21,0:21:14.74:0,15,156	0/0:11,0:11:3:0,3,27	0/0:8,0:8:5.99:0,6,51	0/1:15,0:15:0.04:0,0,0	0/0:18,0:18:9.03:0,9,135	0/1:16,4:21:14.01:60,0,14	0/0:35,0:33:27.85:0,28,279	0/0:17,0:17:5.90:0,6,55	1/1:21,0:20:0.89:2,1,0	0/0:23,0:21:11.60:0,12,93	0/0:28,0:26:9.45:0,9,93	0/0:22,0:22:6:0,6,67	0/0:19,0:18:17.79:0,18,206	0/0:17,0:17:14.96:0,15,155	0/0:16,0:16:3.01:0,3,43	1/1:20,0:19:9.30:144,9,0	0/0:21,0:21:8.95:0,9,87	1/1:20,0:17:18.06:311,18,0
chr10	98485543	.	AT	A	1306.29	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.724;DP=619;FS=1.145;HRun=9;HaplotypeScore=58.2204;InbreedingCoeff=0.9928;MQ=72.92;MQ0=0;MQRankSum=-1.829;QD=20.73;ReadPosRankSum=2.684;VQSLOD=4.3015;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,42:45:99:1126,123,0	0/0:5,0:6:17.89:0,18,188	0/0:14,0:14:39.08:0,39,416	0/0:12,0:12:26.81:0,27,303	0/0:28,0:28:81.24:0,81,934	0/0:20,0:20:57.16:0,57,648	0/0:23,0:23:60.16:0,60,682	0/0:25,0:25:72.20:0,72,823	0/0:16,0:16:45.13:0,45,519	0/0:27,0:27:72.21:0,72,823	0/0:16,0:16:39.12:0,39,450	0/0:20,0:20:54.15:0,54,615	0/0:27,0:27:78.23:0,78,900	0/0:33,0:33:96.29:0,96,1108	0/0:23,0:23:69.19:0,69,786	0/0:16,0:16:42.12:0,42,485	0/0:26,0:26:78.23:0,78,899	1/1:2,16:18:33.01:302,33,0	0/0:22,0:22:60.11:0,60,676	0/0:35,0:35:99:0,105,1193	0/0:28,0:28:72.21:0,72,831	0/0:17,0:17:42.12:0,42,485	0/0:21,0:21:60.17:0,60,684	0/0:22,0:22:51.13:0,51,577	0/0:20,0:20:54.16:0,54,623	0/0:22,0:22:63.19:0,63,727	0/0:28,0:28:81.24:0,81,934	0/0:9,0:9:21.06:0,21,242
chr10	98486370	.	G	GGA	220.05	PASS	AB=0.716;AC=6;AF=0.107;AN=56;BaseQRankSum=6.052;DP=565;FS=9.165;HRun=0;HaplotypeScore=108.9692;InbreedingCoeff=0.1182;MQ=55.81;MQ0=24;MQRankSum=-1.935;QD=1.88;ReadPosRankSum=-5.463;VQSLOD=-0.6672;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:43.18:0,43,282	0/0:6,0:9:10.13:0,10,101	0/0:23,0:4:7.54:0,8,32	0/0:15,0:4:0.46:0,0,9	0/1:17,0:27:22.16:22,0,247	0/0:11,0:18:19.54:0,20,290	0/0:17,0:26:49.58:0,50,402	0/0:13,0:28:25.13:0,25,265	0/0:3,0:13:18.13:0,18,91	0/0:11,0:20:23.87:0,24,265	0/1:10,0:27:32.89:33,0,262	0/0:9,2:19:4.08:0,4,202	0/0:2,0:9:0.54:0,1,5	0/0:8,0:16:13.32:0,13,173	0/0:10,0:15:7.16:0,7,244	1/1:13,0:13:29.14:263,29,0	0/0:11,0:31:18.34:0,18,360	0/0:22,0:21:30.98:0,31,184	0/0:15,0:16:14.81:0,15,273	0/1:14,0:29:8.04:8,0,223	0/0:12,0:16:0.68:0,1,249	0/0:3,0:9:16.84:0,17,102	0/0:10,0:13:30.11:0,30,268	0/0:5,0:23:9.26:0,9,223	0/0:11,0:13:32.77:0,33,359	0/0:14,0:25:1.53:0,2,304	0/0:15,0:23:5.20:0,5,329	0/1:16,0:19:17.12:17,0,303
chr10	98486380	.	A	AT	701.01	PASS	AB=0.835;AC=6;AF=0.107;AN=56;BaseQRankSum=8.877;DP=549;FS=32.802;HRun=0;HaplotypeScore=76.4297;InbreedingCoeff=0.6472;MQ=62.31;MQ0=19;MQRankSum=-3.615;QD=8.65;ReadPosRankSum=5.128;VQSLOD=1.8125;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,23:36:66.70:477,67,0	0/1:5,0:6:8.58:9,0,57	0/0:25,0:5:11.85:0,12,80	0/0:19,0:9:5.63:0,6,55	0/0:27,0:27:63.34:0,63,470	0/0:14,0:13:23.24:0,23,180	0/0:22,0:22:38.02:0,38,368	0/0:31,0:31:48.75:0,49,394	0/0:14,0:14:16.86:0,17,106	0/0:19,0:17:26.15:0,26,200	0/0:27,0:27:48.96:0,49,412	0/0:18,0:17:24.78:0,25,224	0/0:11,0:11:11.72:0,12,76	0/0:16,0:16:24.25:0,24,184	0/0:16,0:15:35.39:0,35,290	0/1:10,3:13:4.52:44,0,5	0/0:33,0:33:41.94:0,42,368	1/1:10,16:25:38.80:305,39,0	0/0:19,0:17:46.04:0,46,385	0/0:29,0:28:65.69:0,66,487	0/0:17,0:17:36.55:0,37,280	0/0:9,0:9:21.27:0,21,147	0/0:9,0:9:13.35:0,13,151	0/0:22,0:22:28.85:0,29,189	0/0:13,0:13:33.02:0,33,344	0/0:18,0:18:41.28:0,41,326	0/0:20,0:19:34.48:0,34,300	0/0:20,0:19:41.97:0,42,336
chr10	98486381	.	A	AAT	1555.66	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.598;DP=547;FS=6.281;HRun=0;HaplotypeScore=83.4808;InbreedingCoeff=0.8845;MQ=62.54;MQ0=16;MQRankSum=0.872;QD=20.47;ReadPosRankSum=6.584;VQSLOD=3.0774;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:37:71:850,71,0	0/0:6,0:6:17.41:0,17,108	0/0:25,0:5:12.41:0,12,100	0/0:19,0:9:13.36:0,13,103	0/0:27,0:27:52.87:0,53,432	0/0:14,0:14:12.68:0,13,201	0/0:22,0:22:43.85:0,44,388	0/0:31,0:31:72.84:0,73,497	0/0:14,0:14:29.34:0,29,193	0/0:17,0:17:42.43:0,42,302	0/0:27,0:27:20.13:0,20,373	0/0:18,0:17:1.32:0,1,169	0/0:11,0:11:14.75:0,15,100	0/0:16,0:16:35.43:0,35,251	0/0:16,0:15:28.30:0,28,287	1/1:0,3:13:26.92:263,27,0	0/0:33,0:33:31.61:0,32,430	1/1:2,16:25:48.28:584,48,0	0/0:18,0:16:46.75:0,47,391	0/0:29,0:28:58.25:0,58,477	0/0:16,0:16:30.68:0,31,307	0/0:9,0:9:26.61:0,27,189	0/0:10,0:10:26.58:0,27,220	0/0:22,0:22:15.11:0,15,253	0/0:13,0:13:30.04:0,30,323	0/0:18,0:18:44.72:0,45,349	0/0:20,0:19:35.13:0,35,292	0/0:20,0:19:26.09:0,26,329
chr10	98487809	.	G	GTGTC	2826.64	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.179;DP=933;FS=4.195;HRun=0;HaplotypeScore=150.0600;InbreedingCoeff=0.8401;MQ=66.70;MQ0=8;MQRankSum=0.108;QD=27.99;ReadPosRankSum=3.507;VQSLOD=3.7436;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:47,0:47:81.28:1429,81,0	0/0:14,0:14:24.06:0,24,369	0/0:60,0:25:21.53:0,22,304	0/0:58,0:32:1.56:0,2,192	0/0:32,0:32:87.21:0,87,1303	0/0:24,0:24:57.13:0,57,865	0/0:27,0:27:71.93:0,72,1056	0/0:34,0:34:63.15:0,63,875	0/0:27,0:27:72.23:0,72,1149	0/0:46,0:46:99:0,120,1843	0/0:34,0:34:87.24:0,87,1341	0/0:22,0:22:48.14:0,48,765	0/0:30,0:30:75.13:0,75,1109	0/0:29,0:29:63.17:0,63,988	0/0:35,0:35:75.16:0,75,1075	1/1:4,18:26:36.12:887,36,0	0/0:36,0:36:84.27:0,84,1357	1/1:28,0:28:1.17:640,1,0	0/0:31,0:30:48.03:0,48,663	0/0:39,0:39:93.28:0,93,1486	0/0:43,0:43:99:0,99,1508	0/0:32,0:32:84.22:0,84,1255	0/0:28,0:28:63.18:0,63,992	0/0:36,0:36:87.25:0,87,1371	0/0:31,0:31:81.25:0,81,1304	0/0:34,0:34:81.25:0,81,1276	0/0:30,0:30:66.18:0,66,988	0/0:18,0:18:51.15:0,51,822
chr10	98487825	.	C	CTGTA	3607.93	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-4.297;DP=883;FS=10.208;HRun=0;HaplotypeScore=136.5484;InbreedingCoeff=0.7586;MQ=59.89;MQ0=3;MQRankSum=1.381;QD=35.37;ReadPosRankSum=5.807;VQSLOD=3.3257;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,39:44:81.28:2071,81,0	0/0:12,0:12:30.02:0,30,410	0/0:36,0:20:28.35:0,28,454	0/0:37,0:24:8.61:0,9,297	0/0:36,0:36:84.19:0,84,1328	0/0:22,0:22:60.18:0,60,987	0/0:31,0:31:80.97:0,81,1261	0/0:36,0:36:81.11:0,81,949	0/0:30,0:30:86.88:0,87,1324	0/0:50,0:50:99:0,141,2023	0/0:32,0:32:84.26:0,84,1403	0/0:21,0:21:63:0,63,922	0/0:31,0:31:84.20:0,84,1287	0/0:26,0:26:66.17:0,66,1053	0/0:33,0:33:81.17:0,81,1187	0/1:27,0:27:52.81:537,0,53	0/0:35,0:35:96.22:0,96,1495	1/1:4,27:31:39.13:1000,39,0	0/0:25,0:24:50.38:0,50,711	0/0:40,0:40:99:0,114,1700	0/0:40,0:40:99:0,108,1645	0/0:34,0:34:87.12:0,87,1234	0/0:24,0:24:69.18:0,69,1117	0/0:32,0:32:84.17:0,84,1313	0/0:33,0:33:96.17:0,96,1355	0/0:37,0:37:99:0,99,1510	0/0:28,0:28:72.12:0,72,999	0/0:20,0:20:57.14:0,57,910
chr10	98488312	.	T	TA	341.75	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=5.871;DP=537;FS=4.879;HRun=0;HaplotypeScore=57.1796;InbreedingCoeff=0.6377;MQ=69.52;MQ0=1;MQRankSum=-2.200;QD=10.68;ReadPosRankSum=-0.992;VQSLOD=3.2877;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:56.15:0,56,432	0/0:16,0:16:48.16:0,48,659	0/1:16,0:13:11.90:12,0,162	0/0:7,0:5:9.86:0,10,65	0/0:25,0:25:75.20:0,75,977	0/0:28,0:28:81.27:0,81,1118	0/0:15,0:15:45.15:0,45,627	0/0:29,0:29:81.25:0,81,1084	0/0:18,0:18:54.17:0,54,730	0/0:20,1:21:57.18:0,57,776	0/0:30,0:30:87.26:0,87,1171	0/0:17,0:17:51.08:0,51,678	0/0:20,0:20:60.19:0,60,821	0/0:19,0:19:57.18:0,57,781	0/0:23,0:23:69.21:0,69,908	0/0:20,0:20:57.19:0,57,793	0/0:29,0:29:87.27:0,87,1193	1/1:1,15:16:40.14:433,40,0	0/0:12,0:12:36.10:0,36,483	0/0:19,0:19:57.17:0,57,764	0/0:11,0:11:30.09:0,30,401	0/0:13,0:13:39.13:0,39,539	0/0:20,0:20:60.20:0,60,835	0/0:14,0:14:42.13:0,42,569	0/0:18,0:18:54.15:0,54,721	0/0:30,0:30:84.25:0,84,1100	0/0:24,0:24:72.22:0,72,973	0/0:7,0:7:21.07:0,21,293
chr10	98488313	.	T	TA	860.21	PASS	AB=0.941;AC=5;AF=0.089;AN=56;BaseQRankSum=0.143;DP=532;FS=0.646;HRun=9;HaplotypeScore=52.5190;InbreedingCoeff=0.7318;MQ=69.30;MQ0=1;MQRankSum=-0.633;QD=16.54;ReadPosRankSum=-0.930;VQSLOD=3.3030;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,16:20:45.12:496,45,0	0/0:16,0:16:47.99:0,48,416	0/1:15,1:13:32.19:33,0,32	0/0:6,0:4:4.11:0,4,17	0/0:25,0:25:56.95:0,57,510	0/0:28,0:28:68.98:0,69,598	0/0:15,0:15:35.99:0,36,312	0/0:29,0:29:65.95:0,66,563	0/0:17,0:17:41.99:0,42,364	0/0:19,0:20:50.01:0,50,420	0/0:30,0:30:77.91:0,78,660	0/0:18,0:18:29.07:0,29,346	0/0:20,0:20:53.95:0,54,461	0/0:19,0:19:53.98:0,54,466	0/0:23,0:23:59.96:0,60,512	0/0:20,0:20:53.97:0,54,465	0/0:29,0:29:74.94:0,75,645	1/1:16,0:16:42.11:461,42,0	0/0:12,0:12:26.96:0,27,230	0/0:19,0:19:50.95:0,51,434	0/0:10,0:10:23.99:0,24,208	0/0:13,0:13:35.99:0,36,312	0/0:20,0:20:53.98:0,54,468	0/0:14,0:14:38.97:0,39,334	0/0:18,0:18:50.97:0,51,438	0/0:27,0:28:64.91:0,65,535	0/0:24,0:24:65.95:0,66,565	0/0:7,0:7:21:0,21,182
chr10	98488983	.	TTG	T	40.44	PASS	AB=0.957;AC=10;AF=0.179;AN=56;BaseQRankSum=3.982;DP=587;FS=0.000;HRun=0;HaplotypeScore=80.6687;InbreedingCoeff=-0.0878;MQ=55.67;MQ0=25;MQRankSum=-0.629;QD=0.27;ReadPosRankSum=-2.095;VQSLOD=0.6730;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:5.87:0,6,57	0/0:9,0:9:12.04:0,12,182	0/0:45,0:10:3.84:0,4,21	0/0:55,0:21:11.32:0,11,119	0/1:16,2:17:27.92:28,0,299	0/0:13,0:14:27.08:0,27,400	0/1:26,0:26:11.80:12,0,715	0/0:31,0:31:26.76:0,27,380	0/0:18,0:18:26.54:0,27,418	0/0:15,0:15:15.05:0,15,223	0/1:22,1:23:38.17:38,0,295	0/0:23,0:23:47.90:0,48,703	0/0:14,0:13:21.05:0,21,297	0/1:11,1:12:14.18:14,0,186	0/0:25,3:29:4.69:0,5,616	1/1:15,0:15:2.84:9,3,0	0/0:30,1:31:4.37:0,4,488	0/0:14,0:12:5.68:0,6,39	0/1:6,1:7:22.57:23,0,84	0/0:14,0:14:11.36:0,11,294	0/0:36,0:36:52.21:0,52,857	0/1:14,0:14:1.28:1,0,81	0/0:18,0:18:8.17:0,8,252	0/0:15,0:15:26.98:0,27,387	0/1:18,0:17:5.65:6,0,333	0/1:18,0:17:38.40:38,0,302	0/0:22,0:22:19.10:0,19,686	0/0:6,0:6:8.94:0,9,102
chr10	98489274	.	AAC	A	814.01	PASS	AB=0.885;AC=20;AF=0.370;AN=54;BaseQRankSum=7.007;DP=496;FS=5.164;HRun=0;HaplotypeScore=82.6677;InbreedingCoeff=-0.0403;MQ=60.60;MQ0=9;MQRankSum=-2.337;QD=3.00;ReadPosRankSum=0.481;VQSLOD=1.5067;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:23:8.52:42,9,0	0/1:6,2:8:43.39:43,0,120	./.	0/0:28,0:21:9:0,9,109	1/1:10,0:19:25.43:126,25,0	0/1:19,2:21:60.57:61,0,354	0/0:18,0:18:6.02:0,6,90	0/0:18,0:18:8.79:0,9,50	0/1:13,0:13:16.14:16,0,142	0/1:15,2:19:55.67:56,0,195	0/1:15,3:18:41.60:42,0,242	0/0:17,0:18:12.94:0,13,343	0/0:12,0:12:18.02:0,18,242	0/1:16,0:17:17.65:18,0,131	0/1:18,3:21:2.65:3,0,351	1/1:11,6:21:35.42:315,35,0	0/0:23,0:23:36.08:0,36,478	1/1:12,0:14:0.91:30,1,0	0/0:9,0:9:3.01:0,3,45	0/0:13,0:13:12.04:0,12,176	0/0:24,0:24:16.16:0,16,409	0/1:7,2:9:23.82:24,0,81	0/1:12,2:14:50.63:51,0,119	0/1:24,4:28:99:114,0,403	0/1:19,0:21:17.82:18,0,105	0/0:14,0:14:17.98:0,18,206	0/0:17,0:17:27.04:0,27,358	0/1:4,1:5:23.79:24,0,81
chr10	98489352	.	AAAAC	A	2254.62	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.179;DP=529;FS=2.711;HRun=0;HaplotypeScore=103.0363;InbreedingCoeff=0.9333;MQ=64.31;MQ0=0;MQRankSum=-6.373;QD=35.79;ReadPosRankSum=0.340;VQSLOD=3.5296;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:54.18:982,54,0	0/0:8,0:8:24.08:0,24,629	0/0:9,0:8:14.83:0,15,239	0/0:8,0:7:3.04:0,3,137	0/0:27,0:27:72.25:0,72,1870	0/0:9,0:9:24.08:0,24,582	0/0:13,0:13:36.12:0,36,943	0/0:39,0:39:96.33:0,96,2416	0/0:18,0:18:54.19:0,54,1410	0/0:25,0:25:66.22:0,66,1679	0/0:19,0:19:54.19:0,54,1403	0/0:23,0:23:66.20:0,66,1613	0/0:16,0:16:48.16:0,48,1246	0/0:21,0:21:60.21:0,60,1567	0/0:21,0:21:57.20:0,57,1482	1/1:5,18:23:44.91:815,45,0	0/0:21,0:21:62.43:0,62,1546	1/1:1,11:12:33.11:600,33,0	0/0:20,0:20:51.18:0,51,1333	0/0:22,0:22:66.23:0,66,1719	0/0:22,0:22:63.22:0,63,1606	0/0:11,0:11:24.08:0,24,608	0/0:17,0:17:51.16:0,51,1281	0/0:18,0:18:51.17:0,51,1293	0/0:20,0:20:60.21:0,60,1542	0/0:26,0:26:75.26:0,75,1953	0/0:22,0:21:66.22:0,66,1671	0/0:11,0:11:33.11:0,33,841
chr10	98489914	.	A	ACTAGGT	5926.05	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.224;DP=604;FS=1.697;HRun=0;HaplotypeScore=126.6572;InbreedingCoeff=0.9874;MQ=80.56;MQ0=0;MQRankSum=-12.138;QD=88.45;ReadPosRankSum=1.171;VQSLOD=6.5186;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:25:63.22:2168,63,0	0/0:8,0:8:21.07:0,21,505	0/0:24,0:24:65.73:0,66,1382	0/0:14,0:14:42.14:0,42,961	0/0:18,0:18:54.19:0,54,1278	0/0:27,0:27:81.23:0,81,1874	0/0:16,0:16:48.15:0,48,1064	0/0:36,0:35:99:0,108,2460	0/0:18,0:18:48.16:0,48,1132	0/0:31,0:31:90.31:0,90,2164	0/0:23,0:23:66.21:0,66,1539	0/0:14,0:14:42.14:0,42,984	0/0:15,0:15:42.13:0,42,941	0/0:12,0:12:36.12:0,36,864	0/0:33,0:33:99:0,99,2334	1/1:4,22:27:78.27:2737,78,0	0/0:22,0:22:63.22:0,63,1488	1/1:7,6:15:30.10:1020,30,0	0/0:16,0:16:45.15:0,45,1078	0/0:34,0:34:99:0,102,2403	0/0:22,0:22:63.22:0,63,1490	0/0:31,0:31:93.31:0,93,2170	0/0:17,0:17:48.16:0,48,1116	0/0:27,0:26:75.26:0,75,1771	0/0:28,0:27:81.28:0,81,1941	0/0:24,0:24:72.25:0,72,1712	0/0:23,0:23:63.22:0,63,1515	0/0:4,0:4:12.04:0,12,289
chr10	98490158	.	TACACACAC	T	2093.34	PASS	AB=0.895;AC=5;AF=0.089;AN=56;BaseQRankSum=6.141;DP=765;FS=0.000;HRun=0;HaplotypeScore=207.4547;InbreedingCoeff=0.7499;MQ=64.54;MQ0=3;MQRankSum=-8.249;QD=29.48;ReadPosRankSum=-1.617;VQSLOD=2.8774;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,14:38:52.12:1092,52,0	0/0:10,0:10:20.94:0,21,883	0/0:33,0:19:27.09:0,27,699	0/0:30,0:18:18.06:0,18,284	0/0:26,0:29:75.24:0,75,2636	0/0:19,0:19:51.17:0,51,1914	0/0:36,0:36:78.27:0,78,2945	0/0:44,0:44:84.27:0,84,2583	0/0:28,0:28:66.23:0,66,2535	0/0:40,0:40:87.29:0,87,3028	0/0:22,0:22:54.19:0,54,2068	0/0:23,0:24:56.72:0,57,1978	0/0:19,0:20:39.61:0,40,1619	0/0:11,0:12:27.08:0,27,870	0/0:20,0:21:48.15:0,48,1874	1/1:8,8:16:36.12:857,36,0	0/0:39,0:39:92.77:0,93,3272	0/1:15,2:17:40.17:274,0,40	0/0:19,0:19:33.11:0,33,1199	0/0:20,0:21:45.15:0,45,1572	0/0:73,0:75:99:0,171,6705	0/0:21,0:26:63.21:0,63,2196	0/0:26,0:26:59.19:0,59,2116	0/0:35,0:36:87.28:0,87,2971	0/0:21,0:21:7.80:0,8,1806	0/0:34,0:34:87.30:0,87,3205	0/0:18,0:17:45.15:0,45,1656	0/0:10,0:10:24.08:0,24,1001
chr10	98490239	.	A	ACACC	4350.03	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-1.704;DP=817;FS=2.905;HRun=0;HaplotypeScore=150.6305;InbreedingCoeff=0.9876;MQ=59.11;MQ0=4;MQRankSum=-0.824;QD=51.79;ReadPosRankSum=1.329;VQSLOD=5.9557;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,33:42:69.16:1729,69,0	0/0:9,0:9:24.05:0,24,408	0/0:45,0:20:28.05:0,28,436	0/0:33,0:21:27.09:0,27,533	0/0:28,0:28:78.25:0,78,1475	0/0:22,0:22:63.18:0,63,1134	0/0:25,0:25:72.06:0,72,1276	0/0:50,0:50:99:0,132,2111	0/0:22,0:22:60.15:0,60,1054	0/0:42,0:42:99:0,111,1912	0/0:33,0:33:87.17:0,87,1672	0/0:24,0:24:60.17:0,60,1119	0/0:15,0:15:38.93:0,39,705	0/0:20,0:20:57.17:0,57,1051	0/0:21,0:21:63.14:0,63,1077	1/1:0,21:22:51.18:1388,51,0	0/0:34,0:34:77.31:0,77,1469	1/1:6,14:20:46.17:1233,46,0	0/0:18,0:18:48.03:0,48,708	0/0:37,0:36:99:0,102,1737	0/0:98,0:98:99:0,255,4734	0/0:35,0:35:96.03:0,96,1719	0/0:23,0:23:61.38:0,61,1097	0/0:23,0:22:56.45:0,56,1094	0/0:28,0:28:48.69:0,49,1378	0/0:27,0:27:78.23:0,78,1403	0/0:16,0:16:48.03:0,48,752	0/0:4,0:4:11.99:0,12,198
chr10	98490482	.	T	TAC	3006.40	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.924;DP=874;FS=1.562;HRun=0;HaplotypeScore=128.6519;InbreedingCoeff=0.9579;MQ=66.77;MQ0=0;MQRankSum=-2.667;QD=30.68;ReadPosRankSum=1.992;VQSLOD=5.6391;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,34:42:89.89:1445,90,0	0/0:15,0:15:33.11:0,33,413	0/0:37,0:35:69.29:0,69,761	0/0:38,0:34:68.04:0,68,784	0/0:15,0:15:36.09:0,36,434	0/0:26,0:26:60.19:0,60,750	0/0:34,0:34:78.22:0,78,946	0/0:34,0:33:63.19:0,63,776	0/0:30,0:30:75.22:0,75,924	0/0:49,0:49:99:0,117,1417	0/0:28,0:28:72.23:0,72,900	0/0:33,0:33:91.15:0,91,1111	0/0:30,0:30:72.16:0,72,844	0/0:22,0:22:57.18:0,57,712	0/0:38,0:37:90.27:0,90,1112	1/1:2,25:28:63.22:1039,63,0	0/0:21,0:20:51.16:0,51,631	1/1:13,14:27:5.56:656,6,0	0/0:26,0:27:57.01:0,57,689	0/0:28,0:28:78.25:0,78,976	0/0:51,0:51:99:0,135,1611	0/0:25,0:25:66.21:0,66,825	0/0:25,0:25:52.48:0,52,629	0/0:42,0:42:99:0,99,1237	0/0:32,0:32:86.95:0,87,1062	0/0:38,0:38:40.73:0,41,970	0/0:36,0:36:73.52:0,74,1139	0/0:22,0:22:63.19:0,63,788
chr10	98490648	.	TAC	T	2037.33	PASS	AB=0.955;AC=7;AF=0.125;AN=56;BaseQRankSum=11.920;DP=783;FS=15.850;HRun=0;HaplotypeScore=116.1612;InbreedingCoeff=0.7830;MQ=68.59;MQ0=0;MQRankSum=-1.878;QD=19.97;ReadPosRankSum=3.104;VQSLOD=3.3898;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,32:43:91.39:1165,91,0	0/0:9,0:9:27.08:0,27,426	0/0:33,1:33:20.73:0,21,826	0/0:33,1:34:30.52:0,31,974	0/0:28,0:28:75.24:0,75,1218	0/0:24,0:24:60.21:0,60,1004	0/0:31,0:31:78.27:0,78,1305	0/0:28,0:28:78.26:0,78,1282	0/0:29,0:29:75.17:0,75,1251	0/0:32,0:32:81.28:0,81,1346	0/0:26,0:26:69.24:0,69,1135	0/0:31,0:31:81.27:0,81,1344	0/0:27,0:27:72.25:0,72,1199	0/0:21,0:21:57.18:0,57,927	0/0:35,0:35:99:0,99,1649	1/1:6,17:23:45.14:573,45,0	0/0:26,0:26:69.23:0,69,1129	1/1:2,13:15:32.52:434,33,0	0/1:20,1:21:12.81:13,0,700	0/0:29,1:30:37.11:0,37,1141	0/0:52,0:52:99:0,123,2021	0/0:22,0:22:39.13:0,39,650	0/0:24,0:24:57.19:0,57,954	0/0:45,0:45:99:0,111,1785	0/0:13,0:13:36.12:0,36,602	0/0:33,0:33:90.31:0,90,1502	0/0:33,0:33:96.22:0,96,1494	0/0:13,0:13:1.23:0,1,456
chr10	98490694	.	CCA	C	211.08	PASS	AB=0.894;AC=11;AF=0.196;AN=56;BaseQRankSum=5.677;DP=745;FS=2.190;HRun=0;HaplotypeScore=116.0194;InbreedingCoeff=-0.2376;MQ=59.50;MQ0=12;MQRankSum=0.763;QD=0.85;ReadPosRankSum=-0.790;VQSLOD=1.9574;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:35:28.12:0,28,241	0/1:8,4:12:45.21:45,0,256	0/0:37,0:23:20.38:0,20,213	0/0:22,0:15:9.50:0,9,123	0/0:32,0:32:66.22:0,66,1024	0/1:27,1:29:3.96:4,0,564	0/0:29,0:29:44.44:0,44,692	0/1:27,3:30:17.46:17,0,482	0/0:30,1:31:15.59:0,16,956	0/0:30,0:28:55.38:0,55,883	0/1:20,5:25:99:122,0,456	0/1:21,3:24:24.84:25,0,557	0/0:19,2:21:7.11:0,7,529	0/1:18,2:20:22.70:23,0,600	0/0:28,1:29:25.18:0,25,823	0/0:21,0:31:43.47:0,43,547	0/0:24,0:24:59.97:0,60,853	0/0:23,0:23:31.74:0,32,279	0/1:19,0:19:1.87:2,0,352	0/0:25,1:26:25.19:0,25,826	0/0:40,1:39:18.28:0,18,752	0/1:26,3:28:35.77:36,0,847	0/0:18,1:19:7.13:0,7,533	0/0:28,0:28:54.09:0,54,776	0/1:15,3:18:33.79:34,0,399	0/1:25,3:27:27.87:28,0,649	0/0:36,1:37:55.12:0,55,1280	0/1:14,1:15:15.88:16,0,346
chr10	98491178	.	G	GA	3418.04	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-13.067;DP=504;FS=19.072;HRun=1;HaplotypeScore=44.8209;InbreedingCoeff=0.9884;MQ=86.80;MQ0=0;MQRankSum=-1.502;QD=40.21;ReadPosRankSum=2.544;VQSLOD=1.7198;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:43:99:1731,117,0	0/0:5,0:5:15.05:0,15,194	0/0:15,0:15:42.13:0,42,535	0/0:21,0:21:53.30:0,53,685	0/0:23,0:23:66.21:0,66,855	0/0:16,0:16:48.12:0,48,591	0/0:26,0:26:78.14:0,78,945	0/0:29,0:29:84.25:0,84,1055	0/0:11,0:11:33.09:0,33,413	0/0:12,0:12:36.11:0,36,460	0/0:14,0:14:42.12:0,42,524	0/0:12,0:12:36.12:0,36,467	0/0:14,0:14:42.12:0,42,528	0/0:19,0:19:54.15:0,54,699	0/0:16,0:16:48.14:0,48,608	1/1:0,21:20:63.21:932,63,0	0/0:34,0:34:99:0,102,1261	1/1:0,20:20:51.17:755,51,0	0/0:16,0:16:48.16:0,48,621	0/0:13,0:13:39.08:0,39,486	0/0:21,0:21:63.20:0,63,801	0/0:13,0:13:36.10:0,36,452	0/0:12,0:12:36.07:0,36,421	0/0:24,0:24:69.21:0,69,879	0/0:13,0:13:36.12:0,36,467	0/0:18,0:18:54.17:0,54,688	0/0:17,0:17:48.13:0,48,606	0/0:5,0:5:15.03:0,15,179
chr10	98491393	.	GCC	G	568.49	PASS	AB=0.877;AC=8;AF=0.154;AN=52;BaseQRankSum=0.535;DP=145;FS=0.000;HRun=11;HaplotypeScore=25.6937;InbreedingCoeff=0.3741;MQ=98.44;MQ0=1;MQRankSum=-0.015;QD=9.64;ReadPosRankSum=3.382;VQSLOD=-0.4576;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,12:16:21.92:226,22,0	0/0:1,0:1:3.01:0,3,46	0/0:13,0:8:8.41:0,8,127	0/1:20,1:14:43.30:43,0,73	0/0:3,0:3:5.51:0,6,55	0/0:2,0:2:0:0,0,0	0/0:7,0:8:14.53:0,15,173	0/0:5,0:5:5.51:0,6,56	0/0:2,0:3:5.51:0,6,55	0/0:4,0:4:6.02:0,6,92	./.	0/0:5,0:5:12.01:0,12,139	0/0:1,0:1:0:0,0,0	0/0:4,0:3:8.99:0,9,75	./.	1/1:1,9:10:21.05:223,21,0	0/0:8,0:9:17.03:0,17,202	1/1:1,7:8:18.03:191,18,0	0/0:2,0:2:6.01:0,6,67	0/0:2,0:2:5.99:0,6,49	0/0:9,0:9:11.98:0,12,117	0/0:4,0:4:9.03:0,9,139	0/0:1,0:1:3:0,3,26	0/0:2,0:3:2.50:0,2,9	0/0:3,0:3:3.01:0,3,45	0/0:3,0:3:6.01:0,6,74	0/0:1,0:1:3:0,3,26	0/1:3,1:4:22.91:23,0,62
chr10	98492542	.	CCTCTCTCTCTTTCTCTCT	C	256.98	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=6.396;DP=580;FS=5.020;HRun=0;HaplotypeScore=225.4544;InbreedingCoeff=0.7970;MQ=64.82;MQ0=30;MQRankSum=-2.165;QD=2.71;ReadPosRankSum=-0.868;VQSLOD=2.3210;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:18:20.72:140,21,0	0/0:8,0:8:17.96:0,18,336	0/1:48,0:18:3.49:3,0,99	0/0:66,0:20:10.96:0,11,122	0/0:16,0:16:32.19:0,32,267	0/0:21,0:21:50.91:0,51,434	0/0:26,0:26:55.53:0,56,810	0/0:18,0:17:32.90:0,33,277	0/0:27,0:26:50.22:0,50,716	0/0:30,0:29:74.79:0,75,1054	0/0:13,0:13:9.70:0,10,303	0/0:12,0:12:27:0,27,486	0/0:13,0:13:16.52:0,17,152	0/0:13,0:11:23.24:0,23,362	0/0:29,0:28:66.09:0,66,1527	1/1:2,15:17:5.67:36,6,0	0/0:19,0:20:30.09:0,30,996	1/1:11,0:10:23.90:213,24,0	0/0:14,0:13:11.84:0,12,290	0/0:15,0:15:31.83:0,32,274	0/0:23,0:23:53.97:0,54,1130	0/0:14,0:13:23.94:0,24,302	0/0:9,0:9:23.22:0,23,192	0/0:33,0:31:72.19:0,72,1300	0/0:14,0:14:34.80:0,35,294	0/0:21,0:21:62.83:0,63,850	0/0:17,0:17:35.45:0,35,702	0/0:13,0:12:36.01:0,36,336
chr10	98492545	.	CTCTCTCTT	C	558	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=9.506;DP=576;FS=5.298;HRun=0;HaplotypeScore=132.6577;InbreedingCoeff=0.1952;MQ=64.13;MQ0=33;MQRankSum=-1.579;QD=2.44;ReadPosRankSum=-0.275;VQSLOD=1.6121;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:17:20.72:140,21,0	0/0:7,0:7:17.91:0,18,184	0/1:48,0:18:4.34:4,0,98	0/0:64,0:19:11.85:0,12,123	0/0:15,0:15:32:0,32,266	0/0:21,0:21:50.91:0,51,434	0/0:25,0:25:54.66:0,55,490	0/0:15,0:14:35.69:0,36,289	0/0:19,7:25:43.67:0,44,384	0/0:31,0:30:74.97:0,75,720	0/0:15,0:15:10.46:0,10,234	0/1:11,0:11:28.45:28,0,175	0/1:12,0:12:36.68:37,0,134	0/0:12,0:10:3.71:0,4,147	0/1:29,0:28:49.23:49,0,483	1/1:16,0:16:5.67:36,6,0	0/1:19,0:19:47.62:48,0,230	1/1:12,0:10:23.90:197,24,0	0/1:13,0:12:99:107,0,122	0/0:16,0:16:34.20:0,34,282	0/0:23,0:23:16:0,16,344	0/0:13,0:12:23.76:0,24,203	0/0:11,0:11:25.72:0,26,200	0/1:33,0:30:35.69:36,0,435	0/0:15,0:15:35.02:0,35,295	0/0:23,0:23:61.60:0,62,557	0/1:17,0:17:43.41:43,0,113	0/0:15,0:13:24.23:0,24,301
chr10	98492553	.	TTCTC	T	789.35	PASS	AB=0.986;AC=20;AF=0.435;AN=46;BaseQRankSum=1.061;DP=600;FS=41.563;HRun=0;HaplotypeScore=106.2452;InbreedingCoeff=0.1601;MQ=54.36;MQ0=39;MQRankSum=1.695;QD=3.11;ReadPosRankSum=4.473;VQSLOD=0.1131;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:0:0,0,0	0/0:6,0:6:0.89:0,1,2	./.	./.	./.	0/0:22,0:22:0:0,0,1	0/0:26,0:26:0.47:0,0,2	0/0:19,0:18:1.25:0,1,3	1/1:26,0:25:2.53:36,3,0	0/0:31,0:30:14.35:0,14,100	./.	0/1:19,0:18:13.07:75,0,13	1/1:8,0:11:2.32:31,2,0	1/1:10,0:8:3.01:35,3,0	0/1:26,0:25:19.69:178,0,20	0/0:19,0:19:0:0,0,0	0/1:22,0:20:6.43:95,0,6	1/1:12,0:10:5.49:35,5,0	1/1:18,0:20:8.05:73,8,0	0/0:17,0:17:0:0,0,0	1/1:28,0:27:7.37:95,7,0	0/0:11,3:13:0:0,0,0	0/0:12,0:12:0:0,0,0	0/1:32,1:30:6.64:68,0,7	./.	1/1:24,3:26:1.25:40,1,0	1/1:18,0:18:0.35:136,0,0	0/0:18,0:15:4.28:0,4,21
chr10	98493655	.	T	TTA	171.92	PASS	AB=0.923;AC=3;AF=0.054;AN=56;BaseQRankSum=4.477;DP=445;FS=1.370;HRun=0;HaplotypeScore=52.1326;InbreedingCoeff=0.4934;MQ=70.71;MQ0=2;MQRankSum=-0.313;QD=8.60;ReadPosRankSum=-2.040;VQSLOD=2.6304;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.22:0,69,887	0/0:13,0:13:33.11:0,33,425	0/0:5,0:4:2.49:0,2,9	0/1:10,0:11:20.16:20,0,84	0/0:25,0:25:69.22:0,69,876	0/0:23,0:23:63.20:0,63,799	0/0:5,0:5:12.04:0,12,154	0/0:29,0:29:69.22:0,69,876	0/0:15,0:15:30.07:0,30,358	0/0:18,0:18:48.15:0,48,607	0/0:15,0:15:42.14:0,42,541	0/0:12,0:12:33.09:0,33,399	0/0:10,0:10:27.09:0,27,347	0/0:12,0:12:24.08:0,24,309	0/0:17,0:17:39.11:0,39,488	1/1:1,7:8:15.05:252,15,0	0/0:25,0:25:69.22:0,69,888	0/0:20,0:18:48.16:0,48,618	0/0:22,0:22:54.17:0,54,684	0/0:20,0:20:51.15:0,51,632	0/0:10,0:10:30.10:0,30,386	0/0:2,0:2:3.01:0,3,39	0/0:18,0:18:45.15:0,45,578	0/0:4,0:4:9.03:0,9,116	0/0:26,0:26:72.22:0,72,914	0/0:22,0:22:57.18:0,57,734	0/0:18,0:18:42.14:0,42,540	0/0:14,0:14:42.14:0,42,539
chr10	98495983	.	GAGGAAGAC	G	662.54	PASS	AB=0.615;AC=1;AF=0.018;AN=56;BaseQRankSum=5.126;DP=721;FS=2.604;HRun=0;HaplotypeScore=178.0254;InbreedingCoeff=-0.0223;MQ=69.28;MQ0=0;MQRankSum=-5.140;QD=27.61;ReadPosRankSum=1.010;VQSLOD=3.3051;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,111,4192	0/0:7,0:7:18.06:0,18,668	0/0:26,0:23:45.04:0,45,1115	0/0:40,0:38:57.57:0,58,1581	0/0:18,0:18:24.25:0,24,1686	0/0:21,0:21:48.16:0,48,1740	0/0:27,0:27:60.20:0,60,2232	0/0:35,0:35:51.18:0,51,1820	0/0:20,0:20:48.16:0,48,1700	0/0:32,0:32:63.21:0,63,2249	0/0:12,0:12:30.10:0,30,1064	0/0:29,0:29:54.19:0,54,2043	0/0:27,0:27:63.22:0,63,2508	0/0:20,0:20:51.16:0,51,1821	0/0:23,0:23:48.13:0,48,1722	0/1:9,15:24:92.01:737,0,92	0/0:28,0:28:57.19:0,57,2041	0/0:23,0:23:51.18:0,51,2014	0/0:26,0:26:45.15:0,45,1579	0/0:23,0:23:54.17:0,54,2102	0/0:43,0:43:99:0,102,3732	0/0:16,0:16:45.15:0,45,1874	0/0:24,0:24:63.22:0,63,2317	0/0:38,0:38:78.14:0,78,2822	0/0:24,0:24:66.23:0,66,2353	0/0:30,0:30:72.25:0,72,2681	0/0:23,0:23:48.15:0,48,1722	0/0:8,0:8:6.02:0,6,250
chr10	98498624	.	CT	C	790.01	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.743;DP=598;FS=3.078;HRun=2;HaplotypeScore=60.4165;InbreedingCoeff=0.9903;MQ=89.99;MQ0=0;MQRankSum=-2.982;QD=31.60;ReadPosRankSum=-0.009;VQSLOD=3.1955;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:47.37:0,47,677	0/0:10,0:10:27.09:0,27,405	0/0:26,0:26:75.25:0,75,1101	0/0:28,0:28:84.27:0,84,1221	0/0:28,0:28:78.26:0,78,1168	0/0:15,0:15:39.13:0,39,585	0/0:24,0:24:72.24:0,72,1079	0/0:23,0:23:54.18:0,54,787	0/0:29,0:29:84.28:0,84,1258	0/0:24,0:23:66.22:0,66,971	0/0:12,0:12:30.10:0,30,446	0/0:24,0:24:69.23:0,69,1033	0/0:25,0:25:75.25:0,75,1106	0/0:30,0:30:90.30:0,90,1348	0/0:36,0:36:99:0,108,1601	1/1:2,23:25:69.22:885,69,0	0/0:21,0:21:63.21:0,63,940	0/0:24,0:24:72.24:0,72,1079	0/0:21,0:21:57.19:0,57,851	0/0:16,0:16:45.15:0,45,674	0/0:18,0:18:54.18:0,54,808	0/0:21,0:21:48.15:0,48,701	0/0:19,0:19:54.17:0,54,789	0/0:12,0:12:36.12:0,36,538	0/0:17,0:17:42.14:0,42,630	0/0:19,0:19:51.17:0,51,762	0/0:22,0:22:66.18:0,66,946	0/0:7,0:7:18.06:0,18,270
chr10	98498923	.	G	GATTTT	1876.63	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.761;DP=774;FS=2.449;HRun=0;HaplotypeScore=156.4155;InbreedingCoeff=0.9827;MQ=76.08;MQ0=1;MQRankSum=-6.382;QD=67.02;ReadPosRankSum=0.369;VQSLOD=4.7248;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,162,3643	0/0:14,0:14:42.14:0,42,977	0/0:13,0:13:25.59:0,26,686	0/0:21,0:20:54.05:0,54,1221	0/0:35,0:35:99:0,102,2140	0/0:18,0:18:54.14:0,54,1073	0/0:23,0:23:69.21:0,69,1515	0/0:31,0:31:87.26:0,87,1779	0/0:26,0:26:78.24:0,78,1697	0/0:25,0:25:75.24:0,75,1619	0/0:20,0:20:60.21:0,60,1375	0/0:35,0:35:99:0,102,2281	0/0:31,0:31:90.31:0,90,2088	0/0:27,0:27:81.28:0,81,1879	0/0:30,0:30:90.26:0,90,1997	1/1:11,17:28:33.37:1971,33,0	0/0:50,0:50:99:0,147,3236	0/0:35,0:35:99:0,105,2387	0/0:14,0:14:42.12:0,42,865	0/0:21,0:21:60.18:0,60,1307	0/0:49,0:49:99:0,144,3169	0/0:19,0:19:53.37:0,53,1101	0/0:31,0:31:93.26:0,93,2019	0/0:40,0:40:99:0,117,2526	0/0:23,0:23:66.20:0,66,1438	0/0:34,0:34:99:0,99,2214	0/0:21,0:21:63.22:0,63,1449	0/0:5,0:5:15.02:0,15,301
chr10	98498926	.	T	TCTATTGACA	3452.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.377;DP=777;FS=1.436;HRun=0;HaplotypeScore=222.2718;InbreedingCoeff=0.9701;MQ=75.85;MQ0=1;MQRankSum=-8.834;QD=95.89;ReadPosRankSum=0.415;VQSLOD=3.9495;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,166,5150	0/0:14,0:14:42.14:0,42,1357	0/0:14,0:14:36.09:0,36,1028	0/0:20,0:19:57.03:0,57,1628	0/0:33,0:33:93.32:0,93,2955	0/0:17,0:17:51.18:0,51,1542	0/0:23,0:23:66.23:0,66,2106	0/0:30,0:30:90.29:0,90,2465	0/0:26,0:26:75.26:0,75,2377	0/0:23,0:23:69.23:0,69,2170	0/0:20,0:20:60.21:0,60,1881	0/0:35,0:35:99:0,105,3255	0/0:34,0:34:99:0,99,3025	0/0:27,0:27:81.28:0,81,2607	0/0:29,0:29:87.30:0,87,2772	1/1:19,17:36:46.15:3452,46,0	0/0:49,0:49:99:0,148,4676	0/0:36,0:36:99:0,105,3368	0/0:13,0:13:39.13:0,39,1205	0/0:22,0:22:63.20:0,63,1934	0/0:51,0:51:99:0,150,4570	0/0:17,0:17:45.15:0,45,1468	0/0:29,0:29:87.29:0,87,2701	0/0:39,0:39:99:0,117,3528	0/0:23,0:23:66.22:0,66,2039	0/0:35,0:35:99:0,105,3236	0/0:22,0:22:63.22:0,63,2050	0/0:4,0:4:12.04:0,12,379
chr10	98498944	.	C	CAT	996.53	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.520;DP=754;FS=0.812;HRun=0;HaplotypeScore=104.1205;InbreedingCoeff=0.9095;MQ=68.81;MQ0=1;MQRankSum=-7.002;QD=32.15;ReadPosRankSum=1.070;VQSLOD=5.8334;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,135,1945	0/0:14,0:14:42.10:0,42,559	0/0:7,0:8:20.52:0,21,179	0/0:10,0:9:11.22:0,11,119	0/0:29,0:29:75.24:0,75,1082	0/0:15,0:15:45.13:0,45,639	0/0:27,0:27:72.20:0,72,999	0/0:28,0:28:72.20:0,72,956	0/0:26,0:26:72.19:0,72,998	0/0:27,0:27:81.27:0,81,1176	0/0:18,0:18:54.13:0,54,717	0/0:34,0:34:99:0,99,1455	0/0:38,0:38:99:0,114,1629	0/0:28,0:28:81.22:0,81,1130	0/0:33,0:33:93.27:0,93,1309	1/1:8,22:31:63.15:1091,63,0	0/0:50,0:50:99:0,147,2031	0/0:39,0:39:99:0,108,1568	0/0:13,0:13:36.10:0,36,477	0/0:24,0:24:69.23:0,69,1015	0/0:50,0:50:99:0,132,1882	0/0:19,0:19:54.17:0,54,774	0/0:18,0:18:54.17:0,54,774	0/0:37,0:37:99:0,108,1569	0/0:23,0:23:66.22:0,66,969	0/0:38,0:38:99:0,111,1555	0/0:25,0:25:75.21:0,75,1062	0/0:3,0:3:9.03:0,9,132
chr10	98499376	.	A	AT	584.45	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.093;DP=619;FS=1.909;HRun=6;HaplotypeScore=57.8982;InbreedingCoeff=0.9975;MQ=79.31;MQ0=0;MQRankSum=-2.476;QD=25.41;ReadPosRankSum=0.273;VQSLOD=3.4061;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:84.19:0,84,857	0/0:13,0:13:33.07:0,33,337	0/0:16,0:16:28.03:0,28,384	0/0:14,0:14:36.08:0,36,366	0/0:20,0:20:51.11:0,51,520	0/0:30,0:30:81.17:0,81,819	0/0:23,0:23:66.15:0,66,673	0/0:34,0:34:81.15:0,81,816	0/0:24,0:24:69.12:0,69,695	0/0:31,0:31:87.18:0,87,877	0/0:16,0:16:42.08:0,42,423	0/0:23,0:23:66.14:0,66,667	0/0:19,0:19:48.07:0,48,480	0/0:12,0:12:33.07:0,33,337	0/0:28,0:28:75.16:0,75,759	1/1:4,19:23:54.17:679,54,0	0/0:16,0:16:48.11:0,48,490	0/0:25,0:24:69.15:0,69,704	0/0:28,0:28:78.15:0,78,788	0/0:29,0:29:75.17:0,75,765	0/0:20,0:20:54.10:0,54,544	0/0:21,0:21:60.14:0,60,612	0/0:18,0:18:48.09:0,48,482	0/0:11,0:11:30.07:0,30,306	0/0:26,0:26:63.13:0,63,636	0/0:37,0:37:99:0,102,1036	0/0:17,0:17:45.08:0,45,451	0/0:12,0:12:30.07:0,30,306
chr10	98501072	.	CACAAT	C	300.97	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=6.047;DP=595;FS=36.112;HRun=0;HaplotypeScore=119.9320;InbreedingCoeff=0.6926;MQ=61.43;MQ0=13;MQRankSum=-4.155;QD=5.79;ReadPosRankSum=-2.078;VQSLOD=0.7204;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:21.77:0,22,1333	0/0:8,0:8:18.04:0,18,332	0/0:29,0:14:32.94:0,33,634	0/0:27,0:12:30.06:0,30,501	0/0:17,0:17:24.81:0,25,785	0/0:23,0:23:42.05:0,42,716	0/0:24,0:22:47.97:0,48,850	0/0:33,0:32:84.29:0,84,1726	0/1:22,0:22:2.27:2,0,544	0/0:20,0:20:60.20:0,60,1290	0/0:8,0:8:21.01:0,21,411	0/0:20,0:19:41.01:0,41,763	0/0:18,0:18:18.12:0,18,461	0/0:12,0:12:33.11:0,33,788	0/0:26,0:26:42.13:0,42,855	1/1:7,23:27:20.96:393,21,0	0/0:28,0:28:70.58:0,71,1570	0/0:13,0:13:31.67:0,32,623	0/0:11,0:11:33.11:0,33,698	0/0:21,0:20:46.40:0,46,1114	0/0:32,0:31:69.10:0,69,1350	0/0:18,0:18:33.35:0,33,524	0/0:16,0:16:27.05:0,27,505	0/0:47,0:46:98.32:0,98,2128	0/0:12,0:11:24.08:0,24,462	0/0:15,0:14:39.09:0,39,706	0/0:20,0:20:54.04:0,54,1121	0/0:6,0:6:8.49:0,8,90
chr10	98501075	.	AATAC	A	248.42	PASS	AB=0.961;AC=9;AF=0.161;AN=56;BaseQRankSum=7.149;DP=588;FS=32.015;HRun=0;HaplotypeScore=109.4887;InbreedingCoeff=0.0709;MQ=59.31;MQ0=15;MQRankSum=-2.929;QD=1.91;ReadPosRankSum=-2.970;VQSLOD=-0.0378;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:58.12:0,58,505	0/1:8,0:8:3.15:3,0,146	0/0:27,0:12:32.71:0,33,276	0/0:25,0:10:13.29:0,13,166	0/0:19,0:19:32.97:0,33,547	0/0:23,0:23:32.86:0,33,347	0/0:21,1:20:44.59:0,45,347	0/0:30,0:29:83.75:0,84,697	0/1:13,6:21:72.55:73,0,185	0/0:20,0:20:59.29:0,59,733	0/1:10,0:10:0.46:0,0,316	0/1:20,0:19:32.96:33,0,267	0/1:17,1:18:41.46:41,0,134	0/0:12,0:12:32.42:0,32,511	0/0:25,0:25:41.52:0,42,329	1/1:25,0:25:20.47:162,20,0	0/0:26,0:30:71.63:0,72,928	0/0:14,0:13:4.43:0,4,194	0/0:11,0:11:33.02:0,33,326	0/0:21,0:20:44.54:0,45,753	0/0:30,0:29:59.77:0,60,588	0/1:19,0:19:15.69:16,0,176	0/0:16,0:16:5.71:0,6,167	0/0:43,4:46:50.70:0,51,823	0/0:12,0:11:23.93:0,24,193	0/0:16,0:15:1.02:0,1,223	0/0:21,0:20:39.25:0,39,626	0/1:6,0:6:15:55,0,15
chr10	98501077	.	TAC	T	1038.02	PASS	AB=0.933;AC=33;AF=0.660;AN=50;BaseQRankSum=3.003;DP=604;FS=0.721;HRun=0;HaplotypeScore=89.7602;InbreedingCoeff=0.2058;MQ=55.03;MQ0=17;MQRankSum=0.440;QD=2.56;ReadPosRankSum=0.537;VQSLOD=1.8670;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:42:2.85:0,3,16	1/1:8,0:8:5.83:37,6,0	./.	./.	0/0:18,0:18:18.02:0,18,213	0/1:12,8:21:31.98:84,0,32	1/1:21,3:21:12.03:128,12,0	./.	1/1:21,0:21:8.51:86,9,0	0/1:22,1:23:39.87:40,0,183	0/1:10,0:10:2.11:2,0,105	1/1:15,4:18:8.99:85,9,0	1/1:12,4:17:8.72:61,9,0	0/0:14,0:14:17.99:0,18,178	1/1:17,9:26:3.01:32,3,0	1/1:28,0:25:15.79:67,16,0	0/0:30,0:32:17.58:0,18,313	1/1:14,0:14:5.21:22,5,0	0/0:15,0:15:2.97:0,3,20	0/1:20,0:19:25.87:26,0,199	0/1:33,0:31:15.99:16,0,105	1/1:18,3:20:24.18:208,24,0	1/1:18,0:18:5.85:46,6,0	0/1:42,2:43:21.63:124,0,22	1/1:10,3:12:6.01:64,6,0	1/1:12,0:14:6.15:29,6,0	0/1:21,0:20:14.96:15,0,133	1/1:3,0:6:5.68:28,6,0
chr10	98501765	.	C	CT	241.09	PASS	AB=0.964;AC=3;AF=0.054;AN=56;BaseQRankSum=5.052;DP=579;FS=0.000;HRun=9;HaplotypeScore=56.5330;InbreedingCoeff=0.5500;MQ=62.96;MQ0=4;MQRankSum=-0.303;QD=5.61;ReadPosRankSum=0.221;VQSLOD=0.1562;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,147,1363	0/0:10,0:10:23.97:0,24,208	0/0:9,0:7:9.72:0,10,80	0/0:13,0:9:10.35:0,10,84	0/0:23,0:23:59.98:0,60,521	0/0:15,0:15:38.99:0,39,339	0/0:20,0:20:53.97:0,54,465	0/0:31,0:31:71.96:0,72,623	0/0:14,0:14:41.98:0,42,361	0/0:19,0:19:56.99:0,57,495	0/0:16,1:16:3.40:0,3,254	0/0:22,0:22:56.96:0,57,491	0/0:16,0:16:23.88:0,24,321	0/0:23,0:23:56.96:0,57,491	0/0:16,0:16:47.97:0,48,413	1/1:4,12:16:30.08:332,30,0	0/0:23,0:22:56.98:0,57,495	0/1:26,1:26:12.21:12,0,362	0/0:30,0:27:68.95:0,69,594	0/0:28,0:28:72.42:0,72,619	0/0:15,0:15:23.98:0,24,208	0/0:8,0:8:20.99:0,21,182	0/0:18,0:18:41.95:0,42,356	0/0:19,0:19:56.97:0,57,490	0/0:34,0:34:92.95:0,93,804	0/0:28,0:28:68.95:0,69,599	0/0:17,0:17:41.99:0,42,364	0/0:10,0:10:29.99:0,30,260
chr10	98501956	.	ATCTC	A	1112.68	PASS	AB=0.750;AC=5;AF=0.089;AN=56;BaseQRankSum=4.964;DP=540;FS=1.676;HRun=0;HaplotypeScore=96.4869;InbreedingCoeff=0.7642;MQ=65.42;MQ0=11;MQRankSum=-1.676;QD=20.99;ReadPosRankSum=0.654;VQSLOD=3.5545;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,6:35:64.12:904,64,0	0/0:9,0:9:18.06:0,18,314	0/0:36,0:20:34.23:0,34,425	0/0:33,0:12:28.40:0,28,460	0/0:38,0:38:96.28:0,96,1678	0/0:15,0:15:42.06:0,42,782	0/0:7,0:7:15:0,15,232	0/0:35,0:34:84.02:0,84,1260	0/0:17,0:16:48.10:0,48,1024	0/0:24,0:24:57.18:0,57,1069	0/0:18,0:18:51.09:0,51,796	0/0:22,0:22:63.16:0,63,1209	0/0:7,0:7:15.05:0,15,308	0/0:19,0:18:44.94:0,45,919	0/0:13,0:13:36.12:0,36,804	0/1:6,0:9:30.80:62,0,31	0/0:17,0:17:36.11:0,36,719	1/1:9,0:9:22.39:276,22,0	0/0:14,0:13:30.09:0,30,569	0/0:22,0:22:54.14:0,54,1040	0/0:17,0:15:36.12:0,36,674	0/0:14,0:14:33.10:0,33,665	0/0:16,0:16:42.11:0,42,765	0/0:11,0:11:28.82:0,29,522	0/0:26,0:26:63.18:0,63,1181	0/0:17,0:17:47.75:0,48,545	0/0:21,0:21:51.08:0,51,969	0/0:17,0:18:26.91:0,27,374
chr10	98501971	.	TCC	T	581.28	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=8.598;DP=561;FS=0.000;HRun=3;HaplotypeScore=86.8168;InbreedingCoeff=0.7210;MQ=58.90;MQ0=21;MQRankSum=-1.545;QD=8.81;ReadPosRankSum=-2.305;VQSLOD=-0.5738;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:5.97:365,6,0	0/0:11,0:11:29.63:0,30,222	0/0:30,0:14:10.79:0,11,146	0/0:32,0:11:21.35:0,21,196	0/0:38,0:38:90.36:0,90,1027	0/0:19,0:19:37.55:0,38,553	0/1:11,0:11:8.04:8,0,213	0/0:27,0:25:62.55:0,63,526	0/0:16,0:15:44.85:0,45,569	0/0:22,0:21:25.87:0,26,471	0/0:15,0:15:35.72:0,36,432	0/0:21,0:21:54.79:0,55,697	0/0:8,0:7:15.02:0,15,193	0/0:22,0:21:46.28:0,46,635	0/0:16,0:16:28.05:0,28,557	1/1:8,4:12:19.92:209,20,0	0/0:24,0:21:46.91:0,47,640	1/1:9,1:10:3.83:127,4,0	0/0:16,0:11:27.06:0,27,278	0/0:25,0:25:59.28:0,59,722	0/0:26,0:24:50.93:0,51,609	0/0:15,0:14:31.43:0,31,385	0/0:17,0:16:38.59:0,39,446	0/0:12,0:12:16.08:0,16,386	0/0:28,0:28:40.13:0,40,747	0/0:22,0:22:52.53:0,53,414	0/0:18,0:18:9.04:0,9,534	0/0:15,0:14:28.61:0,29,209
chr10	98501973	.	CCT	C	251.50	PASS	AB=0.959;AC=13;AF=0.250;AN=52;BaseQRankSum=6.832;DP=571;FS=17.539;HRun=0;HaplotypeScore=87.5765;InbreedingCoeff=-0.1602;MQ=58.31;MQ0=30;MQRankSum=1.135;QD=1.09;ReadPosRankSum=1.168;VQSLOD=0.5239;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:34:22.08:22,0,23	0/0:10,0:11:12.03:0,12,135	./.	./.	0/0:38,0:37:3.05:0,3,399	0/1:19,0:19:15.25:15,0,260	0/1:11,0:11:44.29:44,0,153	0/1:27,0:24:5.95:14,0,6	0/0:15,0:15:16.44:0,16,303	0/1:23,2:24:46.27:46,0,230	0/0:12,0:13:14.87:0,15,206	0/0:19,0:19:30.09:0,30,418	0/0:10,0:9:11.93:0,12,118	0/1:20,1:20:26.60:27,0,336	0/1:14,2:16:36:36,0,330	0/1:13,0:13:29.80:49,0,30	0/0:24,1:22:32.73:0,33,438	0/1:11,0:10:3.39:3,0,16	0/0:16,0:11:11.53:0,12,76	0/0:24,0:24:34.37:0,34,413	0/0:26,0:23:12.89:0,13,338	0/0:14,0:13:7.72:0,8,200	0/0:19,0:18:3.65:0,4,278	0/1:12,0:12:10.47:10,0,190	0/0:25,4:30:7.25:0,7,438	0/1:21,1:22:32.81:98,0,33	0/0:17,0:17:8.42:0,8,328	1/1:12,0:14:6.93:31,7,0
chr10	98502963	.	C	CTTTTTTCT	1899.06	PASS	AB=0.556;AC=3;AF=0.054;AN=56;BaseQRankSum=-4.118;DP=590;FS=1.944;HRun=0;HaplotypeScore=134.6828;InbreedingCoeff=0.6690;MQ=68.25;MQ0=1;MQRankSum=-5.962;QD=43.16;ReadPosRankSum=-0.243;VQSLOD=3.3454;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:29:39.13:1510,39,0	0/0:8,0:8:21.06:0,21,461	0/0:26,0:13:14.29:0,14,453	0/0:27,0:23:42.90:0,43,873	0/0:36,0:36:96.27:0,96,2126	0/0:26,0:26:72.23:0,72,1651	0/0:16,0:16:42.12:0,42,920	0/0:39,0:37:91.11:0,91,1670	0/0:23,0:23:66.19:0,66,1442	0/0:21,0:21:57.18:0,57,1315	0/0:19,0:19:48.14:0,48,1088	0/0:10,0:10:30.10:0,30,716	0/0:9,0:9:24.08:0,24,597	0/0:12,0:12:36.12:0,36,830	0/0:18,0:18:54.16:0,54,1206	0/0:13,0:13:39.13:0,39,823	0/0:22,0:22:63.19:0,63,1383	0/1:3,12:15:10.95:495,0,11	0/0:25,0:25:63.16:0,63,1182	0/0:20,0:20:54.16:0,54,1281	0/0:21,0:21:63.20:0,63,1549	0/0:25,0:25:75.17:0,75,1527	0/0:28,0:28:78.25:0,78,1862	0/0:27,0:27:81.27:0,81,2018	0/0:21,0:21:57.19:0,57,1432	0/0:23,0:23:63.18:0,63,1360	0/0:21,0:21:51.16:0,51,1236	0/0:10,0:10:27.05:0,27,565
chr10	98503924	.	ACGCACG	A	123.58	PASS	AB=0.841;AC=2;AF=0.036;AN=56;BaseQRankSum=2.767;DP=607;FS=14.304;HRun=0;HaplotypeScore=133.9668;InbreedingCoeff=-0.0378;MQ=62.44;MQ0=5;MQRankSum=-1.395;QD=4.26;ReadPosRankSum=-4.509;VQSLOD=-0.0499;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:98.84:0,99,1830	0/0:13,0:13:33.03:0,33,693	0/0:27,0:19:51.12:0,51,743	0/0:22,0:20:26.07:0,26,816	0/0:21,0:21:46.88:0,47,891	0/0:19,0:19:36.92:0,37,967	0/0:30,0:30:80.02:0,80,1465	0/0:27,0:27:50.60:0,51,886	0/0:15,0:15:39.12:0,39,948	0/0:13,0:13:39.13:0,39,830	0/0:14,0:14:42.05:0,42,854	0/0:18,0:18:49.40:0,49,1294	0/0:21,0:21:54:0,54,1000	0/0:16,0:16:39.12:0,39,889	0/0:14,0:14:35.93:0,36,847	0/0:14,0:14:29.99:0,30,538	0/0:34,0:34:76.72:0,77,2318	0/0:32,0:32:79.51:0,80,2188	0/0:13,0:13:15.11:0,15,498	0/0:23,0:22:50.62:0,51,871	0/0:46,0:46:99:0,102,1581	0/0:19,0:19:42.13:0,42,954	0/0:10,0:11:24.07:0,24,554	0/0:44,0:43:88.52:0,89,2581	0/0:19,0:19:42.07:0,42,1010	0/1:8,7:14:99:125,0,305	0/0:11,0:11:29.56:0,30,369	0/1:14,0:14:87.91:88,0,228
chr10	98503930	.	GCA	G	983.44	PASS	AB=0.889;AC=25;AF=0.481;AN=52;BaseQRankSum=6.713;DP=608;FS=3.577;HRun=0;HaplotypeScore=82.5275;InbreedingCoeff=-0.4571;MQ=57.52;MQ0=6;MQRankSum=1.842;QD=1.95;ReadPosRankSum=1.383;VQSLOD=1.2723;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,1:45:6.31:6,0,239	0/1:8,3:11:54.08:54,0,78	./.	./.	0/1:18,0:18:17.02:17,0,165	0/1:12,2:14:40.36:40,0,139	0/1:24,2:27:21.97:22,0,357	0/0:23,0:23:11.06:0,11,81	0/1:15,1:16:12:12,0,232	0/1:19,0:19:25.83:26,0,175	0/1:13,1:14:11.98:12,0,239	0/1:19,2:22:6.92:7,0,366	0/1:19,3:23:64.42:64,0,192	0/1:15,1:16:18.03:18,0,146	0/1:9,3:15:31.17:31,0,264	0/0:3,0:10:14.74:0,15,117	0/1:29,1:31:14.30:14,0,697	0/1:30,2:33:20.11:20,0,595	1/1:12,5:18:13.10:136,13,0	1/1:17,1:21:11.86:112,12,0	0/1:30,14:49:51.83:230,0,52	0/1:18,1:20:8.44:8,0,285	0/1:10,2:12:18.12:18,0,156	0/1:44,3:47:79.69:80,0,610	0/1:11,6:17:99:105,0,196	0/0:17,0:16:13.25:0,13,138	1/1:8,5:14:13.72:104,14,0	0/0:12,0:11:1.72:0,2,4
chr10	98504138	.	AGT	A	379.25	PASS	AB=0.974;AC=14;AF=0.280;AN=50;BaseQRankSum=3.527;DP=558;FS=8.381;HRun=0;HaplotypeScore=75.4914;InbreedingCoeff=0.0505;MQ=70.06;MQ0=24;MQRankSum=1.235;QD=1.48;ReadPosRankSum=2.079;VQSLOD=0.5721;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:21:9.02:94,9,0	0/0:10,0:9:3.01:0,3,31	./.	./.	0/0:18,0:15:9.01:0,9,110	0/0:13,0:13:7.97:0,8,127	0/1:31,1:32:59.58:60,0,183	0/0:25,0:24:3.73:0,4,16	0/1:12,3:14:43.57:52,0,44	0/0:17,0:15:2.90:0,3,16	./.	0/1:27,2:29:30.29:30,0,297	0/0:15,0:14:13.22:0,13,145	0/0:26,0:24:12.04:0,12,170	0/1:11,0:11:0.97:1,0,157	0/1:15,0:14:19.93:20,0,38	0/1:30,0:29:3.34:3,0,92	1/1:14,2:17:24.46:228,24,0	0/0:24,0:22:9.91:0,10,116	0/1:13,0:12:3.92:4,0,46	0/1:50,0:48:4.42:4,0,239	0/1:13,0:13:3.73:17,0,4	0/0:7,0:7:2.98:0,3,22	0/0:30,0:28:31.68:0,32,351	0/0:18,0:17:7.42:0,7,58	0/0:21,0:20:5.82:0,6,131	0/0:8,0:8:1.25:0,1,3	0/1:8,0:7:0:0,0,0
chr10	98504179	.	GTGTGTGTGTGTC	G	871.25	PASS	AB=0.925;AC=8;AF=0.154;AN=52;BaseQRankSum=8.387;DP=571;FS=0.556;HRun=0;HaplotypeScore=167.9446;InbreedingCoeff=0.3980;MQ=47.87;MQ0=64;MQRankSum=-0.266;QD=8.14;ReadPosRankSum=0.589;VQSLOD=1.9883;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:26:47.19:356,47,0	0/0:10,0:10:20.74:0,21,262	./.	./.	0/0:19,0:15:23.87:0,24,206	0/0:21,0:18:36.50:0,37,696	0/0:48,0:43:73.94:0,74,633	0/1:13,0:10:36.51:37,0,59	0/0:26,0:23:46.81:0,47,898	0/0:15,0:12:29.80:0,30,508	0/0:11,0:9:11.83:0,12,159	0/0:37,0:36:62.11:0,62,1406	0/0:17,0:15:20.80:0,21,346	0/0:24,0:20:32.88:0,33,608	0/0:21,0:19:44.06:0,44,804	0/0:10,0:9:5.82:0,6,340	0/0:26,0:23:35.74:0,36,562	1/1:18,0:15:20.13:397,20,0	0/0:16,0:15:23.67:0,24,181	0/0:19,0:15:29.86:0,30,464	0/0:65,0:55:75.10:0,75,1528	0/0:16,0:16:9.79:0,10,182	0/1:8,0:8:3.06:3,0,351	0/0:41,0:38:82.28:0,82,1468	0/0:12,0:11:15.48:0,15,318	0/1:12,9:18:80.23:189,0,80	0/0:9,0:8:17.70:0,18,127	0/1:12,0:11:29.91:30,0,94
chr10	98504209	.	CTG	C	1154.78	PASS	AB=0.930;AC=9;AF=0.161;AN=56;BaseQRankSum=7.573;DP=680;FS=0.585;HRun=0;HaplotypeScore=96.9378;InbreedingCoeff=0.5344;MQ=66.37;MQ0=61;MQRankSum=-0.120;QD=7.70;ReadPosRankSum=1.496;VQSLOD=3.4241;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,25:27:60.19:738,60,0	0/0:9,0:9:21.07:0,21,342	0/1:62,0:19:36.58:37,0,183	0/0:75,0:23:35.39:0,35,325	0/0:17,0:15:39.13:0,39,634	0/0:19,0:17:36.12:0,36,586	0/0:52,2:49:25.90:0,26,1394	0/0:24,0:21:48.16:0,48,721	0/0:24,0:22:51.17:0,51,831	0/1:13,2:14:43.53:44,0,360	0/0:12,0:11:27.09:0,27,440	0/0:30,1:30:5.21:0,5,567	0/0:15,0:14:27.09:0,27,440	0/0:23,0:21:48.16:0,48,757	0/0:19,0:18:33.11:0,33,537	1/1:4,10:13:21.07:258,21,0	0/0:19,1:18:2.22:0,2,549	1/1:6,9:13:18.06:221,18,0	0/0:16,0:12:20.13:0,20,325	0/0:14,0:13:39.13:0,39,622	0/0:55,1:49:68.15:0,68,1605	0/0:12,0:12:21.05:0,21,315	0/0:10,0:10:27.08:0,27,414	0/0:41,1:40:65.41:0,65,1527	0/1:9,1:9:12.84:13,0,316	0/0:21,0:19:43.84:0,44,588	0/0:11,0:11:27.09:0,27,431	0/0:6,0:5:9.03:0,9,122
chr10	98504672	.	GC	G	2560.47	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.442;DP=793;FS=0.467;HRun=1;HaplotypeScore=72.0075;InbreedingCoeff=0.9992;MQ=66.13;MQ0=4;MQRankSum=-0.679;QD=35.56;ReadPosRankSum=-1.359;VQSLOD=3.1511;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:67,0:66:99:0,193,2996	0/0:15,0:15:45.15:0,45,712	0/0:27,0:23:69.18:0,69,1025	0/0:29,0:27:61.84:0,62,1108	0/0:24,0:24:72.25:0,72,1142	0/0:24,0:24:72.20:0,72,1080	0/0:32,0:32:96.25:0,96,1457	1/1:0,33:31:93.31:1299,93,0	0/0:31,0:31:93.32:0,93,1471	0/0:29,0:29:81.28:0,81,1293	0/0:25,0:25:75.26:0,75,1198	0/0:33,0:33:99:0,99,1567	0/0:27,0:27:81.28:0,81,1278	0/0:34,0:34:99:0,102,1601	0/0:38,0:38:99:0,114,1771	0/0:23,0:23:66.21:0,66,1030	0/0:27,0:27:81.25:0,81,1267	0/0:17,0:17:51.17:0,51,814	0/0:32,0:32:93.30:0,93,1453	0/0:19,0:19:57.19:0,57,905	0/0:49,0:49:99:0,144,2298	0/0:19,0:19:57.19:0,57,909	0/0:21,0:21:60.20:0,60,957	0/0:38,0:38:99:0,114,1820	0/0:28,0:28:84.29:0,84,1335	1/1:0,27:27:78.24:1069,78,0	0/0:13,0:13:39.13:0,39,623	1/1:0,9:9:23.65:335,24,0
chr10	98505525	.	ATCTC	A	679.43	PASS	AB=0.991;AC=15;AF=0.326;AN=46;BaseQRankSum=4.027;DP=511;FS=25.458;HRun=0;HaplotypeScore=96.3061;InbreedingCoeff=0.3098;MQ=71.51;MQ0=13;MQRankSum=-1.096;QD=4.02;ReadPosRankSum=2.644;VQSLOD=0.3012;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:0:0,0,0	0/0:7,0:7:1.25:0,1,3	./.	./.	0/0:16,0:16:0:0,0,0	0/0:31,0:29:21.26:0,21,394	0/0:16,0:16:13.04:0,13,205	1/1:28,0:27:0.47:1,0,0	0/0:29,0:29:27.11:0,27,452	0/0:23,0:23:15.03:0,15,190	./.	0/0:15,0:15:6.13:0,6,117	0/1:18,0:18:70.25:70,0,154	0/1:16,0:16:30.82:31,0,192	0/0:17,0:16:12.04:0,12,253	1/1:10,0:11:11.61:110,12,0	0/1:20,1:21:16.32:16,0,459	1/1:12,3:15:23.10:305,23,0	1/1:16,0:16:3.01:34,3,0	./.	0/0:5,0:5:3.01:0,3,62	./.	0/0:11,0:11:5.98:0,6,90	0/0:23,0:23:29.90:0,30,589	0/0:18,0:18:3.01:0,3,52	0/1:17,0:17:16.35:213,0,16	0/0:22,0:22:12.88:0,13,180	1/1:11,0:11:3.01:36,3,0
chr10	98507641	.	C	CA	790.78	PASS	AB=0.931;AC=14;AF=0.250;AN=56;BaseQRankSum=0.534;DP=694;FS=6.819;HRun=14;HaplotypeScore=88.4067;InbreedingCoeff=-0.0456;MQ=67.61;MQ0=23;MQRankSum=1.406;QD=3.05;ReadPosRankSum=-2.423;VQSLOD=0.0096;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:26:30:0,30,86	0/1:10,0:10:11.62:12,0,51	0/0:73,0:23:1.78:0,2,18	0/0:68,0:30:10.63:0,11,70	0/1:27,2:30:65.55:66,0,211	0/1:20,0:19:37.94:38,0,103	0/0:16,1:18:4.18:0,4,142	0/1:19,9:28:9.25:148,0,9	0/1:9,0:9:41.71:42,0,58	0/0:23,0:23:34.28:0,34,211	0/0:13,2:15:3.01:0,3,142	0/0:9,0:10:9.68:0,10,56	0/0:14,0:15:25.59:0,26,159	0/0:14,0:14:18.80:0,19,169	0/0:15,0:15:29.81:0,30,162	0/1:21,2:24:44.12:44,0,129	0/0:31,0:31:16.06:0,16,185	0/0:15,0:24:6.89:0,7,37	0/1:23,1:22:9.26:9,0,129	0/0:28,0:29:31.61:0,32,240	0/0:20,0:20:13.18:0,13,190	0/1:17,5:22:30.32:30,0,168	0/0:31,0:31:12.96:0,13,318	0/1:16,0:17:6.04:6,0,107	0/1:26,3:31:57.67:58,0,268	1/1:14,16:28:36.34:328,36,0	0/0:21,0:21:1.51:0,2,114	1/1:5,6:11:4.73:165,5,0
chr10	98508224	.	CCTGT	C	3893.59	PASS	AB=0.785;AC=10;AF=0.179;AN=56;BaseQRankSum=11.097;DP=651;FS=21.441;HRun=0;HaplotypeScore=113.3560;InbreedingCoeff=0.7627;MQ=70.57;MQ0=1;MQRankSum=-2.658;QD=24.03;ReadPosRankSum=0.122;VQSLOD=1.9598;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,19:27:36.08:766,36,0	0/0:17,0:17:33.11:0,33,801	0/0:21,0:18:10.19:0,10,231	0/0:18,0:16:17.98:0,18,293	0/0:21,0:21:27.09:0,27,630	0/0:26,0:26:48.16:0,48,1149	0/0:20,0:20:45.15:0,45,1092	1/1:22,17:39:48.16:750,48,0	0/0:14,0:14:36.12:0,36,873	0/0:35,0:35:93.31:0,93,2169	0/0:21,0:21:54.19:0,54,1294	0/0:26,0:26:60.21:0,60,1447	0/0:17,0:17:48.16:0,48,1129	0/0:16,0:16:42.14:0,42,1019	0/0:15,0:15:36.12:0,36,871	0/0:8,0:27:54.18:0,54,923	0/0:26,0:26:48.16:0,48,1158	1/1:10,15:25:36.12:586,36,0	0/1:18,1:19:9.69:10,0,789	0/0:32,0:32:78.25:0,78,1842	0/0:25,0:25:60.21:0,60,1456	0/0:19,0:19:48.16:0,48,1162	0/0:15,0:15:33.11:0,33,776	0/0:22,0:22:54.19:0,54,1309	0/0:31,0:31:57.20:0,57,1383	0/1:12,19:31:12.64:855,0,13	0/0:24,0:24:63.16:0,63,1423	1/1:0,21:21:57.19:927,57,0
chr10	98508310	.	CCTATCTAT	C	2862.24	PASS	AB=0.789;AC=24;AF=0.480;AN=50;BaseQRankSum=3.134;DP=572;FS=2.348;HRun=0;HaplotypeScore=155.2066;InbreedingCoeff=0.5574;MQ=59.32;MQ0=12;MQRankSum=-6.578;QD=10.04;ReadPosRankSum=1.334;VQSLOD=2.5156;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:17.77:0,18,202	0/1:1,5:6:23.54:68,0,24	./.	./.	0/0:18,0:17:12.04:0,12,476	0/0:19,0:19:24.04:0,24,612	0/0:25,0:24:11.87:0,12,454	0/1:38,0:32:0:0,0,0	1/1:17,12:30:24.08:569,24,0	0/0:23,0:33:30.05:0,30,251	0/0:13,0:17:5.63:0,6,49	0/0:11,0:23:17.98:0,18,167	1/1:8,10:18:6.02:143,6,0	1/1:14,8:22:6.02:143,6,0	0/0:19,0:19:31.92:0,32,1077	1/1:16,0:24:36.56:642,37,0	0/0:14,0:17:0:0,0,0	0/1:12,0:16:1.22:1,0,123	1/1:9,3:12:12.04:261,12,0	1/1:15,3:18:5.98:94,6,0	1/1:30,0:30:2.97:20,3,0	0/0:8,7:14:0:0,0,0	1/1:4,5:8:2.93:74,3,0	./.	0/0:23,0:23:52.98:0,53,1793	1/1:22,2:22:4.88:144,5,0	1/1:7,18:25:27.25:718,27,0	0/1:10,0:11:99:153,0,118
chr10	98508420	.	ATC	A	985.98	PASS	AB=0.988;AC=6;AF=0.107;AN=56;BaseQRankSum=11.726;DP=751;FS=4.175;HRun=0;HaplotypeScore=119.1820;InbreedingCoeff=0.5748;MQ=60.79;MQ0=8;MQRankSum=-3.494;QD=8.96;ReadPosRankSum=-1.737;VQSLOD=2.9978;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,2:29:16.80:0,17,518	0/0:11,0:11:33.11:0,33,586	0/0:23,0:18:42.06:0,42,583	0/0:15,0:6:14.94:0,15,177	0/0:37,0:37:99:0,105,1691	0/0:24,0:24:22.55:0,23,349	0/0:20,0:20:16.10:0,16,271	0/1:39,1:31:56.84:332,0,57	0/0:29,0:29:87.28:0,87,1412	0/0:34,0:34:78.88:0,79,1312	0/0:28,0:28:78.27:0,78,1319	0/0:40,0:40:99:0,111,1759	0/0:23,0:23:63.19:0,63,981	0/0:24,0:24:72.25:0,72,1208	0/0:36,0:36:99:0,102,1720	0/0:31,0:31:90.31:0,90,1514	0/0:19,0:19:32.15:0,32,663	0/1:25,0:25:46.39:46,0,96	0/0:18,0:18:48.06:0,48,719	0/0:33,0:33:93.30:0,93,1539	0/0:25,1:26:66.21:0,66,1103	0/0:29,0:29:74.96:0,75,1244	0/0:13,0:13:39.12:0,39,617	0/0:29,0:29:72.24:0,72,1260	0/0:35,2:37:23.21:0,23,1552	1/1:26,13:39:43.62:693,44,0	0/0:29,0:29:83.48:0,83,1298	1/1:5,1:5:7.06:44,7,0
chr10	98508422	.	CTCTA	C	1101.08	PASS	AB=0.639;AC=7;AF=0.140;AN=50;BaseQRankSum=7.436;DP=769;FS=1.429;HRun=0;HaplotypeScore=150.7476;InbreedingCoeff=0.7211;MQ=60.74;MQ0=10;MQRankSum=-2.664;QD=12.51;ReadPosRankSum=-1.087;VQSLOD=2.8802;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:29:39.13:0,39,781	0/0:13,0:13:33.11:0,33,707	./.	./.	0/0:40,0:40:60.20:0,60,1246	0/1:10,12:23:52.18:195,0,52	1/1:7,13:20:21.07:323,21,0	./.	0/0:31,0:31:45.15:0,45,981	0/0:24,0:36:48.13:0,48,806	0/0:28,0:28:54.19:0,54,1193	0/0:42,0:41:51.08:0,51,1052	0/0:24,0:24:36.10:0,36,666	0/0:25,0:25:45.15:0,45,1009	0/0:36,0:36:60.21:0,60,1355	0/0:34,0:34:21.93:0,22,1269	0/0:20,0:20:31.82:0,32,633	0/0:25,0:26:12.92:0,13,221	0/0:17,0:17:15.05:0,15,290	0/0:34,0:34:63.22:0,63,1337	0/0:26,0:26:45.11:0,45,873	0/0:30,0:30:51.05:0,51,954	0/0:13,0:13:21.07:0,21,420	0/0:29,0:29:60.21:0,60,1354	0/0:37,0:37:4.95:0,5,1014	1/1:39,0:39:53.08:673,53,0	0/0:30,0:30:45.14:0,45,897	1/1:6,0:5:3.01:45,3,0
chr10	98508428	.	CTA	C	931.60	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=13.061;DP=765;FS=2.554;HRun=0;HaplotypeScore=120.7551;InbreedingCoeff=0.5267;MQ=60.48;MQ0=13;MQRankSum=-0.108;QD=8.39;ReadPosRankSum=-2.810;VQSLOD=2.9458;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:28:31.08:0,31,793	0/0:14,0:14:42.14:0,42,764	0/0:20,0:16:26.91:0,27,326	0/0:14,0:5:12.01:0,12,146	0/0:41,0:41:99:0,117,1957	0/0:22,0:22:6.56:0,7,293	0/0:20,0:20:1.15:0,1,192	0/1:40,0:27:74.76:216,0,75	0/0:33,0:33:90.31:0,90,1526	0/0:40,0:40:99:0,118,1730	0/0:27,0:27:75.26:0,75,1343	0/0:39,0:38:99:0,105,1769	0/0:22,0:22:66.22:0,66,1120	0/0:27,0:27:78.27:0,78,1339	0/0:34,0:34:96.33:0,96,1686	0/0:37,0:37:99:0,108,1898	0/0:21,0:21:52.40:0,52,854	0/1:27,0:27:6.40:6,0,692	0/0:18,0:17:51.03:0,51,756	0/0:35,0:35:99:0,99,1721	0/0:25,0:25:66.23:0,66,1182	0/0:27,0:27:71.94:0,72,1265	0/0:13,0:13:39.13:0,39,661	0/0:28,0:28:72.24:0,72,1344	0/0:35,0:35:99:0,100,1632	1/1:24,13:37:9.47:746,9,0	0/0:30,0:30:89.11:0,89,1486	1/1:6,1:6:11.69:86,12,0
chr10	98510294	.	GTC	G	693.29	PASS	AB=1.000;AC=16;AF=0.308;AN=52;BaseQRankSum=5.175;DP=738;FS=1.745;HRun=0;HaplotypeScore=115.8344;InbreedingCoeff=-0.1501;MQ=50.37;MQ0=30;MQRankSum=1.720;QD=1.79;ReadPosRankSum=2.994;VQSLOD=2.0941;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:30:8.63:68,9,0	0/1:9,0:9:37.96:38,0,96	./.	./.	0/0:24,2:23:32.49:0,32,327	0/1:28,0:27:26.36:26,0,196	0/0:25,0:22:9.36:0,9,306	0/0:24,0:23:32.38:0,32,201	0/0:23,0:23:14.22:0,14,376	0/1:34,0:32:13.98:14,0,441	0/0:26,1:27:4.06:0,4,391	0/0:23,0:23:2.27:0,2,314	0/0:19,0:19:22.55:0,23,439	0/0:24,0:24:11.10:0,11,377	0/1:39,0:37:7.03:7,0,528	0/1:44,0:44:9.73:368,0,10	0/1:23,0:22:1.21:1,0,280	1/1:23,2:22:4.90:150,5,0	0/1:16,0:12:16.36:16,0,104	0/0:45,0:44:4.21:0,4,542	0/0:28,0:26:6.66:0,7,241	0/0:27,3:30:36.05:0,36,432	0/0:29,0:28:47.55:0,48,510	0/1:32,0:32:25.94:26,0,503	0/1:23,0:23:14.58:15,0,424	0/1:30,0:30:44.42:49,0,44	0/1:30,0:29:27.61:28,0,587	0/1:19,0:18:29.27:36,0,29
chr10	98510312	.	CTCTCTCTGTGTG	C	1472.59	PASS	AB=0.874;AC=7;AF=0.135;AN=52;BaseQRankSum=7.200;DP=697;FS=8.520;HRun=0;HaplotypeScore=229.6827;InbreedingCoeff=0.4928;MQ=49.60;MQ0=34;MQRankSum=-6.469;QD=12.27;ReadPosRankSum=-1.914;VQSLOD=1.0828;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:32:10.91:11,0,81	0/0:9,0:9:21.05:0,21,728	./.	./.	0/0:27,0:24:42.14:0,42,1504	0/0:29,0:28:46.86:0,47,1395	0/0:24,0:20:45.11:0,45,1214	1/1:23,0:21:49.52:532,50,0	0/0:21,0:21:48.16:0,48,1777	0/0:25,0:24:59.72:0,60,1991	0/0:32,0:32:56.65:0,57,1895	0/0:23,0:23:48.54:0,49,1679	0/0:16,0:16:42.62:0,43,1877	0/0:27,0:27:52.27:0,52,1996	0/0:38,0:34:75.73:0,76,2703	0/0:47,0:45:99:0,100,1928	0/0:20,0:18:45.40:0,45,1458	0/1:25,0:21:26.36:26,0,289	0/0:15,0:11:27.50:0,28,631	0/0:42,0:40:87.04:0,87,2878	0/0:28,0:26:57.58:0,58,1715	0/0:33,0:32:47.96:0,48,1792	0/0:25,0:23:48.16:0,48,1886	0/0:35,0:35:84.26:0,84,2895	0/0:26,0:24:54.17:0,54,2100	1/1:2,16:18:10.38:661,10,0	0/0:33,0:32:93.19:0,93,3291	0/1:7,10:15:99:378,0,121
chr10	98510318	.	CTGTGTG	C	611.25	PASS	AB=1.000;AC=5;AF=0.096;AN=52;BaseQRankSum=6.843;DP=693;FS=12.331;HRun=0;HaplotypeScore=167.8337;InbreedingCoeff=0.3429;MQ=49.34;MQ0=31;MQRankSum=-4.782;QD=7.45;ReadPosRankSum=-1.874;VQSLOD=1.2938;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:34:2.26:0,2,45	0/0:9,0:9:15.05:0,15,308	./.	./.	0/0:23,0:21:30.10:0,30,655	0/0:29,0:28:27.88:0,28,493	0/0:25,0:21:30.05:0,30,523	1/1:14,6:18:18.01:328,18,0	0/0:19,0:19:36.11:0,36,814	0/0:24,0:23:45.09:0,45,931	0/0:33,0:33:44.46:0,44,880	0/0:23,0:23:30.10:0,30,718	0/0:19,0:19:45.63:0,46,1057	0/0:28,0:28:38.81:0,39,1004	0/0:40,0:36:60.14:0,60,1094	0/0:41,0:39:42.28:0,42,945	0/0:22,0:20:32.45:0,32,597	0/1:24,0:20:6.39:38,0,6	0/0:19,0:15:11.07:0,11,316	0/0:40,0:39:48.70:0,49,1181	0/0:26,0:23:33.56:0,34,600	0/0:33,0:31:33.09:0,33,823	0/0:26,0:24:33.10:0,33,746	0/0:36,0:36:66.20:0,66,1519	0/0:27,0:25:48.13:0,48,983	0/1:20,0:20:55.58:219,0,56	0/0:32,0:31:72.21:0,72,1470	0/1:18,0:15:87.66:147,0,88
chr10	98510341	.	TGTGAGAGA	T	337.65	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=6.726;DP=649;FS=5.627;HRun=0;HaplotypeScore=157.8078;InbreedingCoeff=0.1928;MQ=48.91;MQ0=29;MQRankSum=-1.716;QD=4.50;ReadPosRankSum=-0.444;VQSLOD=1.5781;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,23:38:3.01:0,3,15	0/0:9,0:9:10.58:0,11,409	0/0:1,0:1:3.01:0,3,44	0/0:1,0:1:2.96:0,3,19	0/0:23,0:21:39.02:0,39,954	0/0:28,0:28:6.12:0,6,1035	0/0:28,0:24:60.11:0,60,1220	0/1:18,0:16:69.33:69,0,358	0/0:17,0:17:39.53:0,40,987	0/0:20,0:19:36.89:0,37,907	0/0:25,1:26:11.66:0,12,748	0/0:20,0:20:18.46:0,18,723	0/0:23,0:23:49.30:0,49,1064	0/0:26,0:26:18.20:0,18,1143	0/0:29,0:26:53.92:0,54,1053	0/0:32,0:30:5.83:0,6,1414	0/0:26,0:24:29.88:0,30,931	1/1:8,10:17:18.02:344,18,0	0/0:19,0:14:12.03:0,12,441	0/0:32,0:31:32.75:0,33,1192	0/0:25,0:22:21.65:0,22,747	0/0:35,0:33:54.08:0,54,1275	0/0:24,0:22:19.90:0,20,644	0/0:37,0:37:57.84:0,58,2096	0/0:26,0:24:4.43:0,4,677	0/1:22,0:22:17.56:18,0,1003	0/0:27,0:27:31.37:0,31,979	0/1:14,0:12:26.81:27,0,347
chr10	98511111	.	CAAATAAAT	C	2005.63	PASS	AB=0.724;AC=7;AF=0.130;AN=54;BaseQRankSum=7.311;DP=462;FS=19.138;HRun=0;HaplotypeScore=119.3582;InbreedingCoeff=0.7398;MQ=71.97;MQ0=0;MQRankSum=0.589;QD=28.25;ReadPosRankSum=-2.801;VQSLOD=1.5897;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:56.46:0,56,1415	0/0:15,0:15:36.11:0,36,1037	0/0:11,0:11:2.32:0,2,108	./.	0/0:24,0:24:60.17:0,60,1561	0/0:33,0:33:78.27:0,78,2437	0/0:8,0:8:12.04:0,12,276	1/1:15,19:34:57.14:873,57,0	0/0:12,0:12:27.09:0,27,986	0/0:21,0:21:45.14:0,45,1256	0/0:19,0:19:42.14:0,42,1318	0/0:9,0:9:12.04:0,12,367	0/0:13,0:13:24.08:0,24,930	0/0:8,0:8:18.04:0,18,435	0/0:12,0:12:27.08:0,27,817	1/1:8,0:8:12.04:156,12,0	0/0:25,0:25:54.16:0,54,1417	0/0:17,0:17:37.84:0,38,1099	0/0:20,0:19:33.58:0,34,1026	0/0:19,0:20:21.06:0,21,701	0/0:13,0:13:27.08:0,27,717	0/0:9,0:9:12.04:0,12,357	0/0:15,0:15:21.07:0,21,815	0/0:9,0:9:24.08:0,24,902	0/0:17,0:17:39.13:0,39,1334	0/1:13,8:21:83.62:802,0,84	0/0:18,0:18:48.16:0,48,1510	1/1:1,7:8:15.05:317,15,0
chr10	98511136	.	AAATGAATG	A	580.02	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=6.430;DP=467;FS=0.981;HRun=0;HaplotypeScore=125.8947;InbreedingCoeff=0.6532;MQ=57.30;MQ0=2;MQRankSum=-6.594;QD=10.00;ReadPosRankSum=2.541;VQSLOD=2.5388;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:60.18:0,60,1888	0/0:12,0:12:21.07:0,21,755	0/0:4,0:3:0.47:0,0,1	0/0:4,0:2:5.89:0,6,60	0/0:21,0:21:45.06:0,45,1126	0/0:30,0:31:66.18:0,66,2143	0/0:10,0:10:21.07:0,21,423	0/0:32,0:31:33.99:0,34,425	0/0:15,0:15:39.13:0,39,1194	0/0:23,0:23:57.20:0,57,1372	0/0:22,0:22:57.16:0,57,1488	0/0:10,0:10:27.08:0,27,671	0/0:14,0:14:39.13:0,39,1160	0/0:6,0:6:15.05:0,15,322	0/0:14,0:14:36.11:0,36,903	1/1:0,15:15:11.35:307,11,0	0/0:19,0:19:33.09:0,33,1137	0/0:16,0:16:36.12:0,36,1332	0/0:25,0:23:39.05:0,39,1016	0/0:17,0:17:42.14:0,42,1203	0/0:11,0:11:21.07:0,21,553	0/0:6,0:6:15.04:0,15,311	0/0:12,0:12:33.11:0,33,967	0/0:10,0:10:27.09:0,27,897	0/0:20,0:20:42.14:0,42,1199	0/1:26,0:26:99:251,0,130	0/0:22,0:22:51.16:0,51,1633	1/1:17,0:17:7.20:138,7,0
chr10	98511165	.	AATGT	A	2516.49	PASS	AB=0.773;AC=6;AF=0.107;AN=56;BaseQRankSum=0.920;DP=563;FS=0.970;HRun=0;HaplotypeScore=95.7194;InbreedingCoeff=0.6231;MQ=63.05;MQ0=2;MQRankSum=-2.288;QD=22.07;ReadPosRankSum=-0.519;VQSLOD=3.3689;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.04:0,81,1266	0/0:12,0:12:33.07:0,33,599	0/0:11,0:10:23.36:0,23,284	0/0:11,0:9:26.98:0,27,323	0/0:21,0:21:45.06:0,45,741	0/0:33,0:33:72.86:0,73,1674	0/0:18,0:18:54.03:0,54,647	1/1:39,0:39:96.18:1076,96,0	0/0:19,0:19:54.14:0,54,985	0/0:28,0:28:69.18:0,69,1091	0/0:21,0:21:51.11:0,51,946	0/0:15,0:15:45.05:0,45,671	0/0:18,0:18:54.12:0,54,987	0/0:12,0:12:30:0,30,349	0/0:14,0:14:39.09:0,39,682	0/1:18,0:18:22.12:22,0,55	0/0:14,0:14:42.09:0,42,828	0/0:24,0:24:68.97:0,69,1062	0/0:21,0:20:48.09:0,48,790	0/0:29,0:29:78.53:0,79,1126	0/0:17,0:17:45.02:0,45,543	0/0:7,0:7:12.01:0,12,155	0/0:15,0:15:39.09:0,39,716	0/0:12,0:12:36.06:0,36,632	0/0:25,0:25:63.10:0,63,1029	0/1:4,20:24:17.12:756,0,17	0/0:21,0:21:63.15:0,63,1156	1/1:30,3:33:70.20:799,70,0
chr10	98511381	.	TTTC	T	342.55	PASS	AB=1.000;AC=22;AF=0.478;AN=46;BaseQRankSum=2.521;DP=642;FS=0.000;HRun=0;HaplotypeScore=84.2330;InbreedingCoeff=0.3660;MQ=69.44;MQ0=20;MQRankSum=0.903;QD=1.15;ReadPosRankSum=0.845;VQSLOD=1.2564;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:24:0.06:0,0,0	1/1:6,0:6:3.47:26,3,0	./.	./.	0/0:27,0:25:10.20:0,10,73	1/1:28,2:30:5.98:56,6,0	./.	./.	1/1:23,0:22:6:50,6,0	0/0:25,0:24:6.01:0,6,68	0/0:15,0:15:6.85:0,7,56	0/1:26,0:25:41.93:42,0,80	0/0:25,0:25:5.25:0,5,74	1/1:26,0:26:2.97:20,3,0	./.	1/1:22,0:22:6.01:63,6,0	0/0:30,0:30:4.15:0,4,262	1/1:24,0:23:3.89:39,4,0	0/0:22,0:22:3.01:0,3,55	1/1:19,0:19:3:25,3,0	1/1:22,0:20:9.03:110,9,0	0/0:16,0:14:6.02:0,6,101	0/0:15,0:15:5.97:0,6,47	0/0:17,0:17:2.94:0,3,18	0/0:26,0:26:16.58:0,17,213	0/1:37,0:37:4.52:5,0,122	0/1:17,0:16:11.16:31,0,11	1/1:20,0:20:5.42:22,5,0
chr10	98511460	.	TTCC	T	343.04	PASS	AB=1.000;AC=11;AF=0.212;AN=52;BaseQRankSum=8.651;DP=557;FS=3.624;HRun=0;HaplotypeScore=88.5015;InbreedingCoeff=-0.0621;MQ=46.10;MQ0=73;MQRankSum=-4.413;QD=1.51;ReadPosRankSum=-2.166;VQSLOD=1.4962;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:14:49.62:50,0,56	0/0:11,0:10:26.86:0,27,210	./.	./.	0/0:18,1:17:34.37:0,34,280	0/0:27,0:23:19.69:0,20,296	0/0:20,0:17:33.55:0,34,241	0/1:44,0:28:10.31:10,0,92	0/0:24,0:23:47.90:0,48,396	0/0:25,0:18:50.62:0,51,400	0/0:15,0:13:0.78:0,1,171	0/1:19,0:16:32.90:33,0,176	0/0:21,0:20:14.96:0,15,328	0/1:14,0:11:26.90:27,0,120	0/0:21,0:19:43.48:0,43,360	0/0:21,0:18:18.40:0,18,226	0/1:28,0:24:23.38:23,0,326	0/1:13,0:10:38.80:53,0,39	0/0:15,0:11:29.73:0,30,259	0/0:20,0:18:40.49:0,40,321	0/1:20,0:16:3.94:4,0,204	0/0:24,0:18:40.31:0,40,336	0/1:16,0:13:19.50:19,0,108	0/0:18,0:16:26.31:0,26,200	0/0:24,0:22:7.01:0,7,294	0/1:22,0:20:85.12:165,0,85	0/0:25,0:23:31.59:0,32,431	1/1:28,3:25:11.92:102,12,0
chr10	98511472	.	CTCCTCCTCCTCT	C	2612.72	PASS	AB=1.000;AC=8;AF=0.154;AN=52;BaseQRankSum=11.833;DP=594;FS=3.955;HRun=0;HaplotypeScore=171.1139;InbreedingCoeff=0.6468;MQ=47.29;MQ0=72;MQRankSum=-6.549;QD=18.14;ReadPosRankSum=-2.130;VQSLOD=2.4446;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:20:26.44:454,26,0	0/0:10,0:9:27.09:0,27,905	./.	./.	0/0:20,0:17:42.14:0,42,1548	0/0:28,0:24:45.15:0,45,1722	0/0:21,0:18:34.36:0,34,1245	1/1:21,22:28:63.11:846,63,0	0/0:25,0:24:57.19:0,57,2133	0/0:35,0:28:75.20:0,75,2518	0/0:14,0:13:27.01:0,27,1056	0/0:21,0:18:36.06:0,36,1245	0/0:21,0:20:48.15:0,48,1743	0/0:18,0:15:33.11:0,33,1179	0/0:22,0:19:48.16:0,48,1885	0/0:19,0:16:33.11:0,33,1132	0/0:25,0:22:6.64:0,7,1157	0/1:16,0:14:30.61:278,0,31	0/0:18,0:12:33.07:0,33,1081	0/0:24,0:22:57.19:0,57,1618	0/0:20,0:15:35.82:0,36,1207	0/0:26,0:19:36.04:0,36,1412	0/0:15,0:12:23.10:0,23,772	0/0:20,0:18:34.36:0,34,1200	0/0:19,0:17:24.08:0,24,1031	0/1:28,0:26:22.78:1066,0,23	0/0:28,0:27:70.97:0,71,2657	1/1:32,0:25:6.02:114,6,0
chr10	98511478	.	CTCCTCT	C	1723.55	PASS	AB=1.000;AC=9;AF=0.173;AN=52;BaseQRankSum=12.158;DP=602;FS=11.887;HRun=0;HaplotypeScore=117.2652;InbreedingCoeff=0.4862;MQ=48.82;MQ0=69;MQRankSum=-6.270;QD=10.38;ReadPosRankSum=-1.607;VQSLOD=1.8226;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:19:20.15:64,0,20	0/0:11,0:10:30:0,30,576	./.	./.	0/0:22,0:20:54.09:0,54,1006	0/0:27,0:24:47.38:0,47,1086	0/0:19,0:16:31.24:0,31,735	1/1:41,1:29:45.17:674,45,0	0/0:26,0:26:63.09:0,63,1340	0/0:35,0:28:81.25:0,81,1658	0/0:13,0:12:26.99:0,27,646	0/0:22,0:20:47.87:0,48,821	0/0:23,0:22:54.15:0,54,1125	0/0:21,0:18:44.13:0,44,771	0/0:23,0:20:57.11:0,57,1218	0/0:20,0:17:36.10:0,36,739	0/1:25,0:21:22.45:22,0,688	0/1:17,0:15:48.70:49,0,87	0/0:19,0:11:30.05:0,30,639	0/0:25,0:23:62.91:0,63,1073	0/0:21,0:16:36.11:0,36,779	0/0:23,0:16:36.11:0,36,819	0/0:16,0:13:30.47:0,30,526	0/0:21,0:19:37:0,37,723	0/0:19,0:17:27.08:0,27,652	1/1:3,25:26:1.37:958,1,0	0/0:29,0:28:80.02:0,80,1650	1/1:8,22:23:6.02:97,6,0
chr10	98514963	.	AT	A	866.63	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.432;DP=546;FS=7.667;HRun=9;HaplotypeScore=51.8890;InbreedingCoeff=0.9894;MQ=76.52;MQ0=0;MQRankSum=-2.367;QD=21.67;ReadPosRankSum=1.196;VQSLOD=4.2896;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:57.03:522,57,0	0/0:10,0:10:27.07:0,27,300	0/0:21,0:19:39.05:0,39,411	0/0:9,0:9:15:0,15,158	0/0:26,0:26:75.19:0,75,838	0/0:24,0:24:69.20:0,69,796	0/0:15,0:15:36.11:0,36,416	0/0:31,0:31:72.21:0,72,831	0/0:17,0:17:51.15:0,51,589	0/0:27,0:27:81.24:0,81,935	0/0:20,0:20:57.17:0,57,658	0/0:14,0:14:42.11:0,42,475	0/0:13,0:13:27.08:0,27,312	0/0:19,0:19:51.13:0,51,564	0/0:14,0:14:42.10:0,42,465	0/0:19,0:19:45.12:0,45,510	0/0:17,0:17:48.14:0,48,554	1/1:1,18:19:51.02:467,51,0	0/0:18,0:18:45.13:0,45,519	0/0:21,0:21:57.17:0,57,658	0/0:16,0:16:45.12:0,45,509	0/0:27,0:27:69.21:0,69,796	0/0:18,0:18:51.14:0,51,579	0/0:19,1:20:32.70:0,33,621	0/0:30,0:30:90.26:0,90,1030	0/0:22,0:22:54.16:0,54,623	0/0:30,0:30:81.22:0,81,924	0/0:8,0:8:24.07:0,24,277
chr10	98516354	.	GA	G	2128.73	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.627;DP=552;FS=0.000;HRun=6;HaplotypeScore=58.6242;InbreedingCoeff=0.9566;MQ=74.24;MQ0=0;MQRankSum=-5.303;QD=26.61;ReadPosRankSum=2.983;VQSLOD=4.0036;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,38:44:99:1157,108,0	0/0:7,0:7:21.07:0,21,273	0/0:16,0:14:36.73:0,37,417	0/0:14,0:13:7.57:0,8,288	0/0:19,0:19:54.09:0,54,641	0/0:17,0:17:51.17:0,51,660	0/0:26,0:26:75.18:0,75,931	0/0:14,0:14:33.08:0,33,392	0/0:14,0:14:39.13:0,39,507	0/0:19,0:19:51.17:0,51,663	0/0:16,0:16:45.11:0,45,545	0/0:12,0:12:36.09:0,36,441	0/0:11,0:11:33.09:0,33,414	0/0:17,0:17:51.17:0,51,660	0/0:20,0:20:54.18:0,54,702	0/0:25,0:25:75.18:0,75,941	0/0:36,0:36:98.51:0,99,1237	1/1:1,35:36:99:1093,102,0	0/0:14,0:14:39.13:0,39,507	0/0:12,0:12:33.11:0,33,426	0/0:21,0:21:54.14:0,54,671	0/0:14,0:14:39.11:0,39,491	0/0:21,0:21:57.12:0,57,669	0/0:35,0:35:99:0,102,1299	0/0:12,0:12:33.11:0,33,429	0/0:36,0:36:99:0,102,1326	0/0:17,0:17:42.14:0,42,546	0/0:7,0:7:21.07:0,21,273
chr10	98516420	.	TGCGCGCGC	T	1455.67	PASS	AB=0.960;AC=10;AF=0.192;AN=52;BaseQRankSum=6.868;DP=398;FS=14.809;HRun=0;HaplotypeScore=119.4099;InbreedingCoeff=0.4135;MQ=76.58;MQ0=8;MQRankSum=-3.544;QD=12.13;ReadPosRankSum=3.141;VQSLOD=1.3636;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,4:28:14.44:338,14,0	./.	./.	0/0:11,0:9:3.01:0,3,40	0/0:22,0:22:27.09:0,27,614	0/0:14,0:14:21.05:0,21,598	0/0:22,0:22:51.17:0,51,1488	1/1:13,4:16:12.04:302,12,0	0/0:9,0:9:9.03:0,9,247	0/0:14,0:14:18.05:0,18,532	0/0:14,0:14:24.03:0,24,462	0/0:5,0:5:7.81:0,8,55	0/0:9,0:9:4.50:0,4,85	0/0:9,0:9:6.61:0,7,129	0/0:9,0:10:14.97:0,15,319	0/1:13,0:13:7.70:90,0,8	0/0:24,0:24:44.92:0,45,1040	1/1:14,2:20:27.09:536,27,0	0/0:16,0:15:18.19:0,18,438	0/0:12,0:12:20.73:0,21,439	0/0:18,0:19:40.30:0,40,1041	0/1:9,0:8:14.49:14,0,229	0/0:12,0:12:24.05:0,24,604	0/0:18,0:20:35.89:0,36,1078	0/0:8,0:8:17.80:0,18,414	0/1:17,2:19:25.97:206,0,26	0/0:8,0:9:7.94:0,8,210	0/1:13,0:13:99:122,0,209
chr10	98516932	.	TG	T	2444.24	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.910;DP=624;FS=6.533;HRun=8;HaplotypeScore=67.8147;InbreedingCoeff=0.9978;MQ=75.30;MQ0=0;MQRankSum=1.101;QD=21.25;ReadPosRankSum=-0.744;VQSLOD=3.6671;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,33:36:87.13:835,87,0	0/0:12,0:12:33.09:0,33,382	0/0:26,0:26:41.54:0,42,555	0/0:24,0:24:18.54:0,19,404	0/0:28,0:28:75.09:0,75,822	0/0:12,0:12:33.09:0,33,383	0/0:25,0:25:66.20:0,66,787	1/1:6,20:26:57.05:535,57,0	0/0:26,0:26:78.20:0,78,897	0/0:27,0:27:72.15:0,72,811	0/0:15,0:16:41.99:0,42,479	0/0:19,0:19:51.13:0,51,584	0/0:26,0:26:72.14:0,72,840	0/0:13,0:13:36.09:0,36,407	0/0:27,0:27:81.21:0,81,930	0/0:18,0:18:48.12:0,48,553	0/0:21,0:21:57.15:0,57,649	1/1:2,13:15:33.05:318,33,0	0/0:25,0:25:54.13:0,54,614	0/0:30,0:30:81.22:0,81,932	0/0:13,0:13:36.06:0,36,394	0/0:28,0:28:78.21:0,78,901	0/0:24,0:24:69.20:0,69,811	0/0:25,0:25:69.18:0,69,799	0/0:17,0:17:42.12:0,42,488	1/1:2,24:26:72.02:672,72,0	0/0:27,0:27:75.13:0,75,863	1/1:0,12:12:27.04:260,27,0
chr10	98517415	.	TTGTG	T	817.88	PASS	AB=0.854;AC=23;AF=0.500;AN=46;BaseQRankSum=2.143;DP=516;FS=28.006;HRun=0;HaplotypeScore=83.5726;InbreedingCoeff=0.2204;MQ=68.31;MQ0=17;MQRankSum=1.648;QD=2.83;ReadPosRankSum=2.363;VQSLOD=-0.0270;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:5,0:4:1.25:0,1,3	./.	./.	0/1:18,0:18:6.34:25,0,6	1/1:18,0:19:6.01:74,6,0	1/1:23,5:28:9.50:120,9,0	0/0:14,0:14:1.25:0,1,3	1/1:8,0:9:6.01:64,6,0	0/0:20,0:20:15.04:0,15,265	0/0:10,0:9:3.01:0,3,43	0/1:22,4:25:0.42:63,0,0	0/1:7,0:12:0:0,0,0	0/1:15,0:15:2.78:18,0,3	1/1:20,5:25:5.70:91,6,0	1/1:15,1:22:9.48:99,9,0	0/1:17,9:26:34.47:82,0,34	1/1:16,0:23:2.99:28,3,0	./.	0/0:6,0:7:2.90:0,3,16	0/0:41,0:38:0.52:0,1,84	0/1:6,1:6:32.62:37,0,33	./.	0/1:23,4:26:0.41:126,0,0	0/0:15,0:15:12.01:0,12,162	0/0:11,0:11:0:0,0,0	1/1:9,6:15:6.02:92,6,0	1/1:11,0:11:3:28,3,0
chr10	98518617	.	CAA	C	480.82	PASS	AB=0.891;AC=8;AF=0.143;AN=56;BaseQRankSum=4.407;DP=624;FS=3.997;HRun=15;HaplotypeScore=82.9439;InbreedingCoeff=0.6477;MQ=77.87;MQ0=9;MQRankSum=-0.653;QD=5.23;ReadPosRankSum=2.312;VQSLOD=0.0023;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,6:13:20.41:156,20,0	0/0:9,0:10:30.09:0,30,395	0/0:60,0:23:32.77:0,33,331	0/0:45,0:19:2.38:0,2,155	0/0:25,0:27:59.65:0,60,736	0/0:15,1:20:23.16:0,23,500	0/0:16,0:17:32.69:0,33,404	0/0:27,0:28:57.03:0,57,688	0/0:12,1:14:14.91:0,15,432	0/0:20,0:21:51.12:0,51,630	0/0:17,1:19:15.75:0,16,476	0/0:10,0:13:31.55:0,32,331	0/1:23,2:26:5.52:6,0,703	0/0:16,0:16:47.90:0,48,573	0/0:15,0:17:41.57:0,42,475	1/1:5,11:15:26.94:238,27,0	0/0:25,0:30:76.28:0,76,920	1/1:3,9:14:14.63:220,15,0	0/0:23,0:28:55.12:0,55,662	0/0:30,0:32:56.88:0,57,724	0/0:11,0:11:27.09:0,27,366	0/0:19,0:21:39.08:0,39,468	0/0:13,1:18:14.68:0,15,398	0/0:12,1:13:0.69:0,1,265	0/0:12,0:14:38.08:0,38,449	0/1:20,2:23:5.30:5,0,414	0/0:30,0:35:85.62:0,86,939	0/0:18,0:21:36.04:0,36,533
chr10	98519562	.	GGT	G	69.38	PASS	AB=0.929;AC=11;AF=0.212;AN=52;BaseQRankSum=2.038;DP=459;FS=3.663;HRun=0;HaplotypeScore=60.7467;InbreedingCoeff=-0.3059;MQ=64.24;MQ0=13;MQRankSum=0.991;QD=0.36;ReadPosRankSum=1.673;VQSLOD=1.2755;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:32:24.05:0,24,292	0/0:4,0:4:3.01:0,3,42	./.	./.	0/1:14,2:14:11.44:11,0,214	0/1:11,0:11:15.28:15,0,103	0/1:23,1:24:11.61:12,0,204	0/0:20,0:19:8.07:0,8,46	0/0:8,0:8:3.01:0,3,44	0/0:10,0:9:9.03:0,9,134	0/1:2,1:4:23.52:24,0,42	0/1:10,0:10:17.37:17,0,147	0/0:9,0:9:12.04:0,12,178	0/0:8,0:8:3.01:0,3,41	0/0:11,0:11:15.05:0,15,223	0/0:17,0:19:24.01:0,24,240	0/1:16,0:17:18.34:18,0,250	0/1:19,1:20:1.65:2,0,226	0/0:13,0:13:6.02:0,6,89	0/0:7,0:7:6.02:0,6,89	0/1:33,0:32:14.38:14,0,439	0/0:15,0:14:24.07:0,24,324	0/0:10,0:9:15.05:0,15,220	0/1:31,3:34:56.51:57,0,370	0/1:7,1:8:20.48:20,0,118	0/0:18,0:20:35.89:0,36,310	0/1:10,2:12:11.96:12,0,208	0/0:5,0:6:9.01:0,9,91
chr10	98519949	.	A	ACT	3878.15	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.142;DP=415;FS=1.600;HRun=0;HaplotypeScore=58.3903;InbreedingCoeff=0.8872;MQ=78.09;MQ0=3;MQRankSum=-3.136;QD=53.13;ReadPosRankSum=-3.472;VQSLOD=3.2209;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:78.25:0,78,1247	0/0:6,0:6:18.05:0,18,262	0/0:18,0:13:4.42:0,4,154	0/0:18,0:11:8.83:0,9,231	0/0:18,0:18:51.16:0,51,802	0/0:20,0:20:57.16:0,57,878	0/0:5,0:5:15.05:0,15,236	1/1:2,38:41:99:2202,120,0	0/0:9,0:9:27.08:0,27,417	0/0:12,0:12:36.12:0,36,567	0/0:9,0:9:24.07:0,24,358	0/0:8,0:8:23.97:0,24,336	0/0:11,0:11:30.10:0,30,488	0/0:8,0:8:24.05:0,24,342	0/0:6,0:6:18.06:0,18,293	0/0:11,0:11:33.10:0,33,516	0/0:37,0:37:99:0,102,1580	0/0:23,0:23:63.69:0,64,1018	0/0:18,0:18:51.17:0,51,829	0/0:12,0:12:33.09:0,33,488	0/0:12,0:12:35.98:0,36,496	0/0:4,0:4:12.04:0,12,193	0/0:4,0:4:12.03:0,12,173	0/0:7,0:7:18.06:0,18,293	0/0:17,0:17:51.11:0,51,776	1/1:2,22:25:75.23:1434,75,0	0/0:18,0:18:51.17:0,51,824	1/1:0,5:7:12.04:243,12,0
chr10	98523910	.	A	AC	4166.99	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.338;DP=723;FS=4.289;HRun=2;HaplotypeScore=91.0424;InbreedingCoeff=1.0000;MQ=80.38;MQ0=0;MQRankSum=-12.964;QD=33.88;ReadPosRankSum=-0.509;VQSLOD=3.4706;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,32:42:75.19:1021,75,0	0/0:17,0:17:45.14:0,45,556	0/0:28,0:28:63.86:0,64,716	0/0:30,0:30:75.59:0,76,885	0/0:25,0:25:63.20:0,63,781	0/0:17,0:17:48.15:0,48,594	0/0:33,0:33:96.26:0,96,1161	1/1:4,17:21:57.19:817,57,0	0/0:37,0:37:99:0,111,1373	0/0:25,0:25:69.22:0,69,856	0/0:22,0:22:63.20:0,63,781	0/0:18,0:18:54.17:0,54,668	0/0:20,0:20:57.18:0,57,704	0/0:27,0:27:81.25:0,81,1004	0/0:24,0:24:69.19:0,69,830	0/0:32,0:32:93.29:0,93,1151	0/0:32,0:32:93.28:0,93,1138	1/1:5,15:20:36.53:676,37,0	0/0:33,0:33:96.30:0,96,1187	0/0:20,0:20:57.12:0,57,663	0/0:32,0:33:73.32:0,73,1129	0/0:25,0:25:75.22:0,75,917	0/0:30,0:30:84.26:0,84,1038	0/0:29,0:29:87.27:0,87,1077	0/0:16,0:15:45.14:0,45,558	1/1:1,24:25:72.24:1028,72,0	0/0:27,0:26:66.19:0,66,805	1/1:1,14:15:45.15:625,45,0
chr10	98523920	.	CA	C	4469.53	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.908;DP=720;FS=0.386;HRun=1;HaplotypeScore=87.8956;InbreedingCoeff=1.0000;MQ=82.38;MQ0=1;MQRankSum=-12.690;QD=36.94;ReadPosRankSum=-0.886;VQSLOD=4.7319;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,41:42:99:1339,99,0	0/0:14,0:14:42.14:0,42,667	0/0:22,0:23:50.91:0,51,772	0/0:35,0:33:86.21:0,86,1289	0/0:24,0:24:69.24:0,69,1102	0/0:17,0:17:48.16:0,48,767	0/0:32,0:32:96.26:0,96,1436	1/1:2,20:22:66.21:892,66,0	0/0:36,0:36:99:0,108,1699	0/0:28,0:28:84.28:0,84,1322	0/0:26,0:26:78.25:0,78,1222	0/0:20,0:20:60.19:0,60,933	0/0:20,0:20:60.20:0,60,950	0/0:27,0:27:81.26:0,81,1271	0/0:23,0:23:69.22:0,69,1079	0/0:32,0:32:96.33:0,96,1531	0/0:31,0:31:93.29:0,93,1460	1/1:1,16:17:45.15:626,45,0	0/0:31,0:31:93.31:0,93,1464	0/0:20,0:20:60.20:0,60,959	0/0:30,0:30:87.25:0,87,1318	0/0:27,0:27:81.26:0,81,1268	0/0:29,0:29:87.28:0,87,1367	0/0:31,0:31:93.27:0,93,1452	0/0:20,0:19:60.19:0,60,935	1/1:1,22:23:69.22:943,69,0	0/0:23,0:23:69.24:0,69,1096	1/1:0,17:17:48.16:670,48,0
chr10	98526098	.	G	GCACA	2799.19	PASS	AB=0.643;AC=13;AF=0.250;AN=52;BaseQRankSum=0.657;DP=769;FS=15.157;HRun=0;HaplotypeScore=167.6599;InbreedingCoeff=0.8171;MQ=65.82;MQ0=13;MQRankSum=-3.524;QD=14.43;ReadPosRankSum=-3.299;VQSLOD=1.4290;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,4:34:26.02:433,26,0	0/0:12,0:12:9.03:0,9,130	./.	./.	0/0:18,0:21:30.05:0,30,405	0/0:18,0:21:30.09:0,30,443	1/1:13,0:23:8.83:86,9,0	1/1:33,0:34:26.56:199,27,0	0/0:26,0:28:23.79:0,24,528	0/0:38,0:41:29.51:0,30,469	0/0:15,0:14:5.69:0,6,311	0/0:22,0:27:45.02:0,45,597	0/0:11,0:12:20.99:0,21,257	0/0:23,0:31:21.07:0,21,519	0/0:21,0:21:35.13:0,35,499	1/1:16,13:36:38.31:708,38,0	0/0:39,0:41:26.46:0,26,753	1/1:12,9:25:21.02:555,21,0	0/0:18,0:17:2.56:0,3,176	0/0:20,0:21:39.02:0,39,505	0/0:35,0:37:42.10:0,42,562	0/0:27,0:28:38.45:0,38,543	0/0:25,0:28:36.03:0,36,471	0/0:47,0:49:64.88:0,65,996	0/0:22,0:25:51.60:0,52,717	1/1:14,13:29:47.61:866,48,0	0/0:23,0:29:36.08:0,36,497	0/1:4,4:9:38.76:132,0,39
chr10	98527160	.	AC	A	2262.97	PASS	AB=0.929;AC=5;AF=0.089;AN=56;BaseQRankSum=8.142;DP=609;FS=0.963;HRun=6;HaplotypeScore=61.1549;InbreedingCoeff=0.8439;MQ=92.87;MQ0=0;MQRankSum=-4.871;QD=22.86;ReadPosRankSum=0.825;VQSLOD=2.8376;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,49:57:99:1481,138,0	0/0:5,0:5:15.05:0,15,197	0/0:26,0:26:66.18:0,66,826	0/0:29,0:29:71.67:0,72,876	0/0:13,0:13:33.11:0,33,434	0/0:22,0:22:66.20:0,66,854	0/0:29,0:29:72.22:0,72,932	0/0:23,0:23:63.18:0,63,789	0/0:33,0:33:99:0,99,1288	0/0:14,0:14:42.14:0,42,552	0/0:6,0:6:18.06:0,18,236	0/0:20,0:20:60.18:0,60,760	0/0:18,0:18:51.16:0,51,667	0/0:17,0:17:51.17:0,51,671	0/0:20,0:20:57.19:0,57,750	0/0:20,0:20:57.19:0,57,750	0/0:37,0:37:99:0,108,1405	1/1:1,28:29:84.21:903,84,0	0/0:19,0:18:51.15:0,51,656	0/0:12,0:12:36.12:0,36,471	0/0:42,0:42:99:0,111,1446	0/0:16,0:16:45.14:0,45,577	0/0:11,0:11:30.10:0,30,395	0/0:22,0:22:60.20:0,60,790	0/1:12,1:13:2.12:2,0,325	0/0:26,0:26:78.23:0,78,996	0/0:20,0:20:60.18:0,60,775	0/0:10,0:10:30.10:0,30,394
chr10	98528177	.	AAG	A	903.93	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.292;DP=470;FS=4.419;HRun=0;HaplotypeScore=60.7481;InbreedingCoeff=0.7743;MQ=52.46;MQ0=32;MQRankSum=-2.469;QD=16.14;ReadPosRankSum=-3.810;VQSLOD=2.0556;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:6.64:0,7,118	0/0:4,0:4:11.98:0,12,112	0/0:35,0:3:3.77:0,4,18	0/0:41,0:9:2.23:0,2,88	0/0:30,0:30:34.90:0,35,698	0/0:17,0:17:40.99:0,41,439	0/0:12,0:11:14.04:0,14,161	1/1:13,0:11:24.69:183,25,0	0/0:8,0:8:20.94:0,21,276	0/0:21,0:21:55.23:0,55,480	0/0:18,0:18:5.49:0,5,433	0/0:8,0:7:15.91:0,16,192	0/0:10,0:10:8.76:0,9,206	0/0:11,0:10:12.22:0,12,187	0/0:16,0:16:41.33:0,41,394	1/1:9,1:10:23.56:201,24,0	0/0:16,0:16:36.75:0,37,423	0/0:21,0:21:22.03:0,22,226	0/0:13,0:8:16.44:0,16,192	0/0:19,0:19:54.72:0,55,659	0/0:15,0:15:19.21:0,19,364	0/0:9,0:8:15.49:0,15,167	0/0:20,0:19:50.80:0,51,568	0/0:9,0:9:2.09:0,2,115	0/0:17,0:17:50.51:0,51,535	1/1:0,21:21:55.58:433,56,0	0/0:25,0:25:50.62:0,51,727	1/1:12,0:10:29.90:244,30,0
chr10	98528237	.	T	TA	117.01	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.883;DP=416;FS=9.888;HRun=7;HaplotypeScore=45.3195;InbreedingCoeff=0.8793;MQ=64.38;MQ0=3;MQRankSum=0.013;QD=19.50;ReadPosRankSum=-2.753;VQSLOD=1.6878;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:55.95:0,56,686	0/0:7,0:7:21.03:0,21,203	0/0:21,0:18:26.67:0,27,276	0/0:14,0:10:17.14:0,17,182	0/0:37,0:37:99:0,99,948	0/0:17,0:17:48.08:0,48,463	0/0:8,0:8:24.04:0,24,231	0/0:27,0:27:78.11:0,78,747	0/0:8,0:8:24.02:0,24,226	0/0:22,0:22:57.09:0,57,550	0/0:15,0:15:42.07:0,42,405	0/0:4,0:4:9.01:0,9,87	0/0:6,0:6:18.01:0,18,168	0/0:7,0:7:18.02:0,18,174	0/0:14,0:14:39.02:0,39,363	1/1:1,5:6:18.05:207,18,0	0/0:20,0:20:57.09:0,57,549	0/0:12,0:12:30.05:0,30,289	0/0:11,0:11:30.04:0,30,286	0/0:14,0:14:36.06:0,36,348	0/0:18,0:18:51.04:0,51,479	0/0:12,0:12:36.06:0,36,348	0/0:15,0:15:39.06:0,39,377	0/0:5,0:5:12.02:0,12,116	0/0:13,0:13:33.05:0,33,318	0/0:21,0:21:54.08:0,54,521	0/0:23,0:23:60.06:0,60,568	0/0:11,0:11:29.97:0,30,272
chr10	98528782	.	CGTGTGTGT	C	1167.77	PASS	AB=0.952;AC=5;AF=0.089;AN=56;BaseQRankSum=7.782;DP=693;FS=0.000;HRun=0;HaplotypeScore=182.4649;InbreedingCoeff=0.6860;MQ=68.27;MQ0=15;MQRankSum=-8.056;QD=14.07;ReadPosRankSum=0.988;VQSLOD=2.8176;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:10.49:65,10,0	0/0:9,0:10:18.06:0,18,678	0/0:34,0:17:8.24:0,8,95	0/0:34,0:22:5.98:0,6,62	0/0:11,0:12:27.08:0,27,859	0/0:18,0:18:21.07:0,21,796	0/0:26,0:26:30.10:0,30,1219	0/0:31,0:30:21.79:0,22,418	0/0:39,0:44:66.01:0,66,2203	0/0:18,0:18:27.07:0,27,719	0/0:11,0:11:21.07:0,21,752	0/0:17,0:18:30.09:0,30,1081	0/0:28,0:32:63.19:0,63,2016	0/0:27,0:28:32.46:0,32,1619	0/0:40,0:40:78.24:0,78,2394	1/1:13,18:34:32.41:1168,32,0	0/0:18,0:18:40.69:0,41,1438	0/1:19,0:20:58.95:59,0,298	0/0:23,0:23:13.86:0,14,458	0/0:14,0:14:18.06:0,18,631	0/0:47,0:47:75.24:0,75,2435	0/0:20,0:21:39.12:0,39,1325	0/0:15,0:15:30.08:0,30,1119	0/0:29,0:33:57.18:0,57,1994	0/0:20,0:23:45.13:0,45,1584	0/0:21,0:21:24.55:0,25,722	0/0:17,0:17:26.19:0,26,1035	0/0:17,0:18:36.12:0,36,1078
chr10	98528818	.	TGTGTGA	T	2152.57	PASS	AB=0.973;AC=12;AF=0.214;AN=56;BaseQRankSum=4.158;DP=707;FS=14.698;HRun=0;HaplotypeScore=160.2182;InbreedingCoeff=-0.0708;MQ=58.34;MQ0=25;MQRankSum=-5.407;QD=8.00;ReadPosRankSum=-1.345;VQSLOD=1.5042;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:12.02:241,12,0	0/0:11,0:11:33.02:0,33,681	0/0:40,0:25:58.16:0,58,620	0/0:40,0:16:45.03:0,45,496	0/0:12,0:12:33.09:0,33,695	0/0:23,0:21:51.71:0,52,972	0/0:19,0:19:51.54:0,52,1275	0/1:20,0:18:99:191,0,116	0/0:32,0:32:79.10:0,79,2008	0/0:18,0:17:48.01:0,48,763	0/0:15,0:14:39.05:0,39,801	0/0:26,0:26:57.07:0,57,1314	0/0:35,0:35:52.11:0,52,1884	0/0:30,0:29:35.01:0,35,1684	0/0:41,0:41:85.07:0,85,2037	0/1:30,0:28:69.89:317,0,70	0/1:22,0:21:59.50:59,0,828	0/1:14,6:20:64.11:568,0,64	0/1:12,0:11:99:108,0,267	0/1:16,0:16:99:131,0,317	0/1:58,0:58:99:409,0,1219	0/0:28,0:28:76.92:0,77,1477	0/0:14,0:14:36.08:0,36,942	0/0:33,0:33:85.94:0,86,1861	0/0:21,0:21:51.03:0,51,1392	0/1:21,0:21:94.38:94,0,406	0/1:21,1:22:99:154,0,578	0/1:18,0:18:36.56:37,0,589
chr10	98528822	.	TGAGAGA	T	1818.57	PASS	AB=0.952;AC=7;AF=0.125;AN=56;BaseQRankSum=2.805;DP=696;FS=10.856;HRun=0;HaplotypeScore=163.1921;InbreedingCoeff=0.4951;MQ=63.95;MQ0=21;MQRankSum=-3.588;QD=18.19;ReadPosRankSum=-0.457;VQSLOD=2.7508;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:9.03:107,9,0	0/0:11,0:11:33.11:0,33,913	0/0:41,0:26:72.07:0,72,2114	0/0:41,0:19:57.20:0,57,1697	0/0:11,0:11:26.99:0,27,694	0/0:24,0:23:56.30:0,56,1517	0/0:20,0:20:54.18:0,54,1667	1/1:2,15:16:45.13:861,45,0	0/0:32,0:32:81.19:0,81,2394	0/0:20,0:19:57.19:0,57,1588	0/0:13,0:14:39.13:0,39,1074	0/0:28,0:28:60.68:0,61,1798	0/0:33,0:33:81.76:0,82,2356	0/0:29,0:28:68:0,68,2139	0/0:39,0:39:99:0,109,3179	0/0:32,0:30:70.56:0,71,847	0/0:22,0:21:56.70:0,57,1110	0/1:16,0:17:99:102,0,238	0/0:15,0:14:36.06:0,36,531	0/0:18,0:18:42.35:0,42,482	0/0:53,0:53:99:0,123,1491	0/0:28,0:28:78.24:0,78,2047	0/0:14,0:14:36.12:0,36,1047	0/0:31,0:31:84.29:0,84,2405	0/0:20,0:20:51.18:0,51,1550	0/1:19,2:21:11.88:611,0,12	0/0:18,0:19:14.48:0,14,768	0/1:15,0:15:99:276,0,139
chr10	98529538	.	TA	T	1333.38	PASS	AB=0.833;AC=7;AF=0.125;AN=56;BaseQRankSum=8.621;DP=520;FS=1.045;HRun=10;HaplotypeScore=50.6300;InbreedingCoeff=0.8359;MQ=68.19;MQ0=0;MQRankSum=-0.556;QD=18.27;ReadPosRankSum=-1.438;VQSLOD=3.6301;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:25:49.15:0,49,763	0/0:7,0:7:15.04:0,15,166	0/0:19,0:15:29.93:0,30,282	0/0:12,0:8:18.01:0,18,184	0/0:17,0:17:45.12:0,45,498	0/0:16,0:16:45.11:0,45,491	0/0:17,0:17:42.11:0,42,465	1/1:3,24:27:71.95:618,72,0	0/0:16,0:16:42.11:0,42,465	0/0:29,0:29:72.19:0,72,790	0/0:12,0:12:30.07:0,30,324	0/0:17,0:17:42.10:0,42,453	0/0:15,0:15:45.08:0,45,484	0/0:22,0:22:54.15:0,54,597	0/0:22,0:21:66.17:0,66,723	0/0:15,0:15:45.12:0,45,498	0/0:18,0:18:45.12:0,45,498	0/0:28,0:28:78.21:0,78,863	0/0:15,1:16:16.06:0,16,405	0/0:21,0:21:57.15:0,57,623	0/0:17,1:18:25.06:0,25,495	0/1:4,1:5:11.02:11,0,118	0/0:12,0:12:30.08:0,30,331	0/0:25,0:25:66.14:0,66,709	0/0:22,0:22:60.16:0,60,664	1/1:3,19:22:26.80:462,27,0	0/0:25,1:26:49.12:0,49,754	1/1:4,15:19:44.98:391,45,0
chr10	98531508	.	TA	T	994.16	PASS	AB=0.581;AC=5;AF=0.089;AN=56;BaseQRankSum=6.344;DP=383;FS=0.587;HRun=10;HaplotypeScore=39.2332;InbreedingCoeff=0.5907;MQ=69.08;MQ0=0;MQRankSum=-0.956;QD=18.08;ReadPosRankSum=-2.886;VQSLOD=2.6989;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:72.19:0,72,796	0/0:8,1:9:1.02:0,1,239	0/0:7,0:6:9:0,9,85	0/0:2,0:2:5.88:0,6,44	0/0:13,0:13:33.09:0,33,365	0/0:21,0:21:63.17:0,63,697	0/0:6,0:8:14.87:0,15,147	1/1:3,22:25:65.98:573,66,0	0/0:11,0:11:24.06:0,24,264	0/0:13,0:13:30.08:0,30,332	0/0:15,0:15:30.08:0,30,332	0/0:3,0:3:6.02:0,6,66	0/0:11,0:11:23.90:0,24,246	0/0:8,0:8:18.03:0,18,190	0/0:13,0:13:30.08:0,30,332	0/0:1,0:11:19.89:0,20,100	0/0:28,0:28:75.16:0,75,816	0/0:31,0:31:84.23:0,84,929	0/0:16,0:16:45.12:0,45,497	0/0:20,0:20:45.59:0,46,499	0/0:8,0:8:15.04:0,15,166	0/0:3,0:3:9.01:0,9,92	0/0:14,0:14:36.10:0,36,398	0/0:3,0:3:9.02:0,9,100	0/0:13,0:13:33.09:0,33,365	0/1:5,13:18:53.89:289,0,54	0/0:18,0:17:48.13:0,48,531	1/1:2,10:12:29.99:260,30,0
chr10	98532613	.	A	AC	628.74	PASS	AB=0.753;AC=6;AF=0.107;AN=56;BaseQRankSum=10.011;DP=648;FS=9.767;HRun=1;HaplotypeScore=115.7016;InbreedingCoeff=0.1956;MQ=57.41;MQ0=4;MQRankSum=-4.812;QD=3.79;ReadPosRankSum=2.991;VQSLOD=-0.1334;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,19:46:99:146,0,109	0/0:8,0:8:24.08:0,24,330	0/0:24,0:16:39.09:0,39,490	0/0:18,0:10:29.81:0,30,340	0/0:30,0:30:84.75:0,85,1167	0/0:21,0:21:60.16:0,60,795	0/0:30,0:30:90.27:0,90,1219	0/1:24,8:32:99:139,0,202	0/0:14,0:14:42.14:0,42,587	0/0:30,0:30:90.28:0,90,1205	0/0:21,0:21:59.89:0,60,825	0/0:27,0:27:81.22:0,81,1088	0/0:10,0:10:30.10:0,30,409	0/0:28,0:28:80.93:0,81,1038	0/0:23,0:23:69.09:0,69,898	1/1:8,19:27:7.84:193,8,0	0/0:29,0:29:84.28:0,84,1167	0/1:22,9:31:99:138,0,118	0/0:18,0:18:54.03:0,54,675	0/0:14,0:14:42.13:0,42,563	0/0:35,0:35:99:0,102,1368	0/0:15,0:15:38.40:0,38,525	0/0:13,0:13:33.10:0,33,453	0/0:33,0:33:99:0,99,1341	0/0:24,0:24:70.12:0,70,959	0/1:18,11:29:99:137,0,150	0/0:15,0:15:45.08:0,45,605	0/0:2,0:2:5.82:0,6,33
chr10	98532614	.	A	ACAC	2283.26	PASS	AB=0.767;AC=7;AF=0.125;AN=56;BaseQRankSum=12.645;DP=649;FS=0.956;HRun=0;HaplotypeScore=136.5702;InbreedingCoeff=0.4736;MQ=57.22;MQ0=4;MQRankSum=-9.701;QD=13.59;ReadPosRankSum=2.192;VQSLOD=3.4023;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,17:48:13.31:498,13,0	0/0:8,0:8:24.08:0,24,429	0/0:24,0:16:36.12:0,36,600	0/0:18,0:10:30.04:0,30,429	0/0:30,0:30:87.19:0,87,1575	0/0:21,0:21:60.18:0,60,1037	0/0:31,0:31:90.28:0,90,1608	0/1:22,8:30:92.61:393,0,93	0/0:14,0:14:42.14:0,42,783	0/0:30,0:30:90.29:0,90,1593	0/0:21,0:21:59.74:0,60,1050	0/0:28,0:28:81.22:0,81,1415	0/0:10,0:10:30.10:0,30,549	0/0:27,0:27:77.90:0,78,1328	0/0:23,0:23:66.14:0,66,1157	1/1:8,17:27:16.50:553,16,0	0/0:29,0:29:84.29:0,84,1559	0/1:24,9:33:68.17:501,0,68	0/0:18,0:18:53.14:0,53,821	0/0:14,0:14:42.14:0,42,736	0/0:35,0:35:99:0,99,1766	0/0:14,0:14:38.72:0,39,692	0/0:13,0:13:35.69:0,36,623	0/0:32,0:32:96.32:0,96,1724	0/0:24,0:24:70.11:0,70,1249	0/1:18,9:29:73.59:477,0,74	0/0:15,0:15:45.09:0,45,784	0/0:2,0:2:5.72:0,6,29
chr10	98532627	.	CCGCG	C	1940.49	PASS	AB=0.636;AC=13;AF=0.241;AN=54;BaseQRankSum=9.146;DP=551;FS=1.786;HRun=0;HaplotypeScore=119.5172;InbreedingCoeff=0.7965;MQ=58.54;MQ0=2;MQRankSum=-6.894;QD=12.77;ReadPosRankSum=-1.261;VQSLOD=3.0708;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,12:36:53.24:573,53,0	0/0:6,0:6:6.49:0,6,150	1/1:13,0:9:2.32:8,2,0	./.	0/0:24,0:24:33:0,33,554	0/0:20,0:20:41.69:0,42,903	0/0:28,0:30:65.83:0,66,1367	1/1:12,8:20:15:197,15,0	0/0:13,0:13:24.03:0,24,499	0/0:23,0:23:42.14:0,42,1001	0/0:19,0:19:45.15:0,45,1068	0/0:23,0:23:38.95:0,39,851	0/0:12,0:12:24.05:0,24,490	0/0:24,0:24:39.07:0,39,848	0/0:16,0:16:27.09:0,27,615	0/1:9,0:21:21.31:110,0,21	0/0:34,0:34:75.13:0,75,1713	1/1:12,19:31:29.90:466,30,0	0/0:14,0:17:13.59:0,14,493	0/0:15,0:15:26.81:0,27,452	0/0:22,0:22:27.09:0,27,671	0/0:18,0:18:45.04:0,45,847	0/0:13,0:13:36.08:0,36,679	0/0:27,0:27:63.16:0,63,1454	0/0:22,0:22:33.06:0,33,613	1/1:21,8:29:53.06:708,53,0	0/0:11,0:11:20.97:0,21,342	1/1:0,2:2:3.01:50,3,0
chr10	98533270	.	TTG	T	49.25	PASS	AB=0.898;AC=13;AF=0.271;AN=48;BaseQRankSum=3.235;DP=541;FS=6.274;HRun=0;HaplotypeScore=74.0653;InbreedingCoeff=0.1137;MQ=70.59;MQ0=14;MQRankSum=1.610;QD=0.24;ReadPosRankSum=-0.248;VQSLOD=0.9161;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,3:34:20.31:24,0,20	1/1:8,0:8:3:29,3,0	./.	./.	0/1:17,3:20:10.79:11,0,177	0/0:14,0:15:14.41:0,14,114	0/1:13,4:16:8.16:26,0,8	./.	0/0:17,0:16:18.06:0,18,255	0/0:21,0:21:6.34:0,6,213	0/0:8,0:8:6.02:0,6,87	0/0:17,0:17:12.02:0,12,148	0/0:9,0:9:8.86:0,9,80	0/0:13,0:12:8.77:0,9,58	0/0:15,0:16:12.01:0,12,138	1/1:9,0:14:8.65:49,9,0	0/1:17,0:17:9.07:9,0,138	1/1:14,0:18:2.84:14,3,0	0/0:18,0:18:3:0,3,25	0/0:11,0:11:6.02:0,6,76	0/1:39,4:42:7.90:8,0,202	0/0:20,0:20:12.48:0,12,125	0/0:21,0:20:20.87:0,21,221	0/0:24,0:24:29.70:0,30,419	0/0:20,0:20:24:0,24,280	0/1:9,0:9:8.14:8,0,18	0/1:21,0:20:9.84:10,0,130	./.
chr10	98534556	.	TAG	T	656.38	PASS	AB=0.905;AC=7;AF=0.125;AN=56;BaseQRankSum=13.573;DP=603;FS=4.531;HRun=0;HaplotypeScore=78.7496;InbreedingCoeff=0.8266;MQ=82.84;MQ0=0;MQRankSum=0.204;QD=6.84;ReadPosRankSum=-1.547;VQSLOD=2.7712;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.24:0,75,1313	0/0:6,0:6:18.06:0,18,328	0/0:20,0:20:27.55:0,28,709	0/0:17,0:17:44.15:0,44,704	0/0:19,0:19:57.07:0,57,818	0/0:32,0:32:96.29:0,96,1687	0/0:20,0:20:60.18:0,60,1035	1/1:29,1:30:64.46:310,64,0	0/0:19,0:19:57.05:0,57,970	0/0:27,0:26:81.25:0,81,1372	0/0:20,0:20:60.19:0,60,1061	0/0:21,0:21:63.20:0,63,1118	0/0:20,0:20:60.17:0,60,1021	0/0:24,0:24:72.23:0,72,1277	0/0:27,0:27:78.25:0,78,1376	1/1:28,1:29:13.67:180,14,0	0/0:22,0:22:66.18:0,66,1139	0/0:28,0:28:84.29:0,84,1530	0/0:20,0:20:57.10:0,57,959	0/0:24,0:24:72.19:0,72,1193	0/0:17,0:17:48.16:0,48,875	0/0:25,0:25:75.22:0,75,1306	0/0:17,0:17:51.16:0,51,897	0/0:14,0:14:42.09:0,42,712	0/0:15,0:15:45.15:0,45,820	0/1:17,2:19:62.39:179,0,62	0/0:27,0:26:78.23:0,78,1359	1/1:18,0:18:38.93:135,39,0
chr10	98534557	.	AG	A	3175.70	PASS	AB=0.576;AC=7;AF=0.125;AN=56;BaseQRankSum=10.783;DP=602;FS=6.725;HRun=1;HaplotypeScore=57.2635;InbreedingCoeff=0.8346;MQ=82.26;MQ0=0;MQRankSum=-1.151;QD=33.08;ReadPosRankSum=-1.841;VQSLOD=2.3912;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.22:0,75,1013	0/0:6,0:6:18.06:0,18,251	0/0:19,0:19:29.97:0,30,582	0/0:17,0:17:30.80:0,31,527	0/0:19,0:19:57.07:0,57,669	0/0:32,0:32:96.29:0,96,1301	0/0:20,0:20:60.17:0,60,804	1/1:1,29:30:87.14:1062,87,0	0/0:19,0:19:52.58:0,53,734	0/0:28,0:27:81.24:0,81,1076	0/0:20,0:20:60.19:0,60,817	0/0:21,0:21:63.20:0,63,861	0/0:20,0:20:60.16:0,60,789	0/0:24,0:24:72.23:0,72,985	0/0:26,0:26:78.23:0,78,1052	1/1:2,27:29:39.36:1022,39,0	0/0:22,0:22:66.18:0,66,883	0/0:28,0:28:84.28:0,84,1170	0/0:20,0:20:57.09:0,57,748	0/0:25,0:25:75.18:0,75,959	0/0:17,0:17:51.15:0,51,693	0/0:25,0:25:75.22:0,75,1011	0/0:17,0:17:51.15:0,51,692	0/0:14,0:14:42.03:0,42,539	0/0:15,0:15:45.15:0,45,628	0/1:5,14:19:26.81:574,0,27	0/0:26,0:25:78.23:0,78,1051	1/1:0,18:18:48.16:666,48,0
chr10	98538694	.	TC	T	1942.31	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.367;DP=682;FS=1.727;HRun=2;HaplotypeScore=64.3869;InbreedingCoeff=0.9958;MQ=62.04;MQ0=6;MQRankSum=0.451;QD=33.49;ReadPosRankSum=0.393;VQSLOD=3.7317;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:42:99:1519,117,0	0/0:9,0:9:27.09:0,27,405	0/0:22,0:14:31.08:0,31,390	0/0:19,0:9:19.16:0,19,310	0/0:29,0:29:62.45:0,62,1214	0/0:24,0:23:72.24:0,72,1078	0/0:15,0:15:45.15:0,45,673	0/0:33,0:33:93.30:0,93,1357	0/0:30,0:30:84.27:0,84,1238	0/0:29,0:29:87.25:0,87,1263	0/0:18,0:18:51.16:0,51,745	0/0:17,0:17:51.16:0,51,744	0/0:22,0:22:66.22:0,66,988	0/0:18,0:18:54.18:0,54,809	0/0:26,0:26:75.24:0,75,1104	0/0:17,0:17:51.16:0,51,744	0/0:26,0:26:78.25:0,78,1135	1/1:0,16:16:42.14:545,42,0	0/0:16,0:14:36.12:0,36,539	0/0:14,0:14:36.12:0,36,536	0/0:54,0:53:99:0,160,2378	0/0:32,0:32:93.28:0,93,1347	0/0:22,0:22:66.20:0,66,949	0/0:33,0:33:99:0,99,1479	0/0:20,0:20:60.20:0,60,899	0/0:35,0:35:99:0,102,1506	0/0:33,0:32:99:0,99,1483	0/0:11,0:11:33.11:0,33,494
chr10	98539075	.	CGGT	C	2091.89	PASS	AB=0.806;AC=7;AF=0.125;AN=56;BaseQRankSum=7.393;DP=805;FS=0.000;HRun=0;HaplotypeScore=131.8913;InbreedingCoeff=0.8365;MQ=73.83;MQ0=2;MQRankSum=-9.518;QD=22.74;ReadPosRankSum=-1.695;VQSLOD=3.0008;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,138,2320	0/0:10,0:10:30.08:0,30,611	0/0:36,0:30:81.14:0,81,1025	0/0:37,0:31:78.07:0,78,1355	0/0:22,0:22:66.15:0,66,1246	0/0:19,0:19:53.18:0,53,1047	0/0:31,0:31:92.29:0,92,1804	1/1:22,4:26:74.87:767,75,0	0/0:24,0:24:72:0,72,1465	0/0:27,0:27:81.21:0,81,1383	0/0:19,0:19:57.11:0,57,1019	0/0:42,0:42:99:0,107,2374	0/0:32,0:32:90.26:0,90,1885	0/0:31,0:31:90.28:0,90,1963	0/0:33,0:33:99:0,99,1941	1/1:1,29:30:55.55:399,56,0	0/0:34,0:34:99:0,102,1878	0/0:20,0:20:57.11:0,57,1112	0/0:23,0:23:69.12:0,69,1070	0/0:22,0:22:63.92:0,64,1133	0/0:55,0:54:99:0,162,3325	0/0:25,0:25:75.11:0,75,1428	0/0:24,0:24:69.09:0,69,1111	0/0:57,0:57:99:0,164,3314	0/0:16,0:16:48.11:0,48,837	0/1:19,6:25:53.26:653,0,53	0/0:25,0:25:61.56:0,62,1385	1/1:9,2:11:33.06:422,33,0
chr10	98539097	.	G	GACA	1346.36	PASS	AB=0.727;AC=5;AF=0.089;AN=56;BaseQRankSum=9.568;DP=797;FS=1.373;HRun=0;HaplotypeScore=137.2214;InbreedingCoeff=0.7237;MQ=57.39;MQ0=14;MQRankSum=-7.826;QD=28.05;ReadPosRankSum=-1.590;VQSLOD=3.6687;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,99,1681	0/0:10,0:10:27.09:0,27,476	0/0:30,0:11:11.87:0,12,355	0/0:37,0:20:46.40:0,46,768	0/0:21,0:21:63.22:0,63,1077	0/0:20,0:20:57.18:0,57,969	0/0:36,0:36:99:0,105,1775	1/1:10,5:15:12.86:426,13,0	0/0:29,0:28:78.25:0,78,1335	0/0:25,0:25:67.11:0,67,1155	0/0:20,0:20:54.17:0,54,892	0/0:37,0:37:99:0,111,1859	0/0:36,0:36:99:0,108,1871	0/0:32,0:32:96.33:0,96,1676	0/0:38,0:38:99:0,108,1883	0/0:32,0:32:7.12:0,7,41	0/0:30,0:30:84.29:0,84,1464	0/0:18,0:18:45.15:0,45,758	0/0:22,0:22:66.11:0,66,1008	0/0:21,0:21:54.13:0,54,899	0/0:62,0:60:99:0,178,3059	0/0:20,0:20:54.18:0,54,917	0/0:16,0:16:45.14:0,45,759	0/0:64,0:64:99:0,184,3176	0/0:21,0:20:54.18:0,54,930	0/1:15,9:24:54.03:794,0,54	0/0:22,0:22:66.20:0,66,1107	1/1:8,1:9:17.13:250,17,0
chr10	98539144	.	CGATGATGATGAT	C	216.98	PASS	AB=0.904;AC=5;AF=0.089;AN=56;BaseQRankSum=6.730;DP=784;FS=0.976;HRun=0;HaplotypeScore=256.2021;InbreedingCoeff=-0.0751;MQ=53.63;MQ0=17;MQRankSum=-6.348;QD=2.26;ReadPosRankSum=-0.433;VQSLOD=2.2753;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:36,1:37:31.07:31,0,970	0/0:9,0:9:24.08:0,24,1005	0/0:26,0:7:21.04:0,21,773	0/0:35,0:20:54.65:0,55,1499	0/0:22,0:22:48.16:0,48,2071	0/0:22,0:22:66.21:0,66,2714	0/0:41,0:40:99:0,114,5495	0/0:14,0:13:36.11:0,36,744	0/0:27,0:26:72.25:0,72,3365	0/0:23,0:22:60.19:0,60,2173	0/0:19,0:19:42.14:0,42,1952	0/0:32,0:32:93.22:0,93,3577	0/0:31,0:31:90.31:0,90,4175	0/0:25,0:25:75.24:0,75,3096	0/0:41,0:41:99:0,114,5160	0/1:28,0:28:46.97:47,0,1296	0/0:42,0:42:99:0,123,5724	0/1:10,2:11:99:157,0,235	0/0:32,0:29:77.43:0,77,2450	0/0:16,0:15:35.78:0,36,1541	0/0:93,0:92:99:0,256,11481	0/0:18,0:17:48.16:0,48,2121	0/0:20,0:19:51.14:0,51,1731	0/0:59,0:59:99:0,175,8487	0/0:25,0:25:66.21:0,66,2746	0/1:15,1:15:71.79:72,0,664	0/0:16,0:16:48.16:0,48,2253	0/1:2,1:3:12.25:28,0,12
chr10	98539151	.	G	GACGACA	235.15	PASS	AB=0.889;AC=5;AF=0.089;AN=56;BaseQRankSum=5.872;DP=786;FS=5.746;HRun=0;HaplotypeScore=176.9421;InbreedingCoeff=0.1839;MQ=54.47;MQ0=13;MQRankSum=-4.983;QD=3.56;ReadPosRankSum=-2.526;VQSLOD=2.0624;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,13:34:8.81:9,0,408	0/0:9,0:9:24.08:0,24,575	0/0:28,0:8:21.03:0,21,462	0/0:38,0:24:56.56:0,57,1165	0/0:22,0:22:48.16:0,48,1146	0/0:22,0:22:66.19:0,66,1549	0/0:38,0:37:99:0,111,2723	0/0:17,0:16:38.32:0,38,721	0/0:29,0:28:78.25:0,78,1860	0/0:18,0:18:51.17:0,51,1163	0/0:19,0:19:45.13:0,45,996	0/0:32,0:32:90.18:0,90,1953	0/0:36,0:36:99:0,102,2333	0/0:26,0:26:75.20:0,75,1728	0/0:40,0:40:99:0,111,2573	0/0:27,0:27:48.63:0,49,1143	0/0:41,0:41:99:0,117,2875	0/1:12,0:11:99:308,0,158	0/0:33,0:29:87.29:0,87,1962	0/0:18,0:17:41.82:0,42,1003	0/0:90,0:89:99:0,256,5922	0/0:17,0:16:48.16:0,48,1175	0/0:19,0:19:48.16:0,48,1082	0/0:60,0:60:99:0,171,3896	0/0:24,0:24:63.22:0,63,1536	0/1:16,0:15:1.43:1,0,498	0/0:17,0:17:48.16:0,48,1175	1/1:4,0:4:0.87:4,1,0
chr10	98539168	.	CGATGAT	C	885.39	PASS	AB=0.800;AC=6;AF=0.107;AN=56;BaseQRankSum=8.434;DP=842;FS=0.000;HRun=0;HaplotypeScore=189.2637;InbreedingCoeff=0.5043;MQ=58.14;MQ0=5;MQRankSum=-4.146;QD=12.83;ReadPosRankSum=-4.095;VQSLOD=1.7584;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:36:8.74:0,9,546	0/0:10,0:10:30.10:0,30,892	0/0:31,0:22:62.93:0,63,1487	0/0:51,0:43:99:0,114,2700	0/0:21,0:21:63.18:0,63,1618	0/0:23,0:23:66.23:0,66,2232	0/0:44,0:44:99:0,126,3517	1/1:1,24:24:66.51:701,67,0	0/0:35,0:34:99:0,102,3038	0/0:24,0:24:69.24:0,69,1906	0/0:16,0:16:36.11:0,36,962	0/0:30,0:30:90.31:0,90,2883	0/0:43,0:43:99:0,123,3658	0/0:35,0:35:99:0,99,2821	0/0:39,0:39:99:0,108,3317	0/1:22,0:22:5.39:5,0,607	0/0:40,0:40:99:0,117,3881	0/0:12,0:14:23.80:0,24,587	0/0:25,0:22:60.20:0,60,1599	0/0:20,0:20:54.19:0,54,1722	0/0:104,0:103:99:0,292,8846	0/0:16,0:16:48.16:0,48,1640	0/0:16,0:16:45.15:0,45,1361	0/0:51,0:51:99:0,141,4711	0/0:23,0:23:63.21:0,63,1852	0/1:6,12:17:99:289,0,106	0/0:24,0:24:69.24:0,69,2040	1/1:3,1:4:0.23:1,0,0
chr10	98539465	.	GGT	G	313.77	PASS	AB=0.901;AC=15;AF=0.313;AN=48;BaseQRankSum=6.258;DP=603;FS=16.108;HRun=0;HaplotypeScore=80.1770;InbreedingCoeff=-0.1265;MQ=64.08;MQ0=13;MQRankSum=-0.784;QD=1.10;ReadPosRankSum=1.536;VQSLOD=0.2150;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:33:17.20:96,17,0	0/0:9,0:9:9.03:0,9,132	./.	./.	0/0:22,0:22:6.49:0,6,80	0/1:11,4:15:79.80:80,0,116	0/1:23,2:25:8.61:9,0,216	./.	0/1:15,1:17:34.70:35,0,77	0/1:22,0:22:5.07:5,0,65	0/0:13,0:13:9.03:0,9,127	0/0:21,1:22:3.64:0,4,427	0/0:19,0:18:9.01:0,9,113	0/1:25,1:26:14.76:15,0,130	0/1:13,0:20:20.40:20,0,67	0/0:27,0:27:10.93:0,11,451	0/1:27,2:28:11.55:12,0,243	1/1:14,0:16:5.68:28,6,0	0/1:13,1:14:23.61:24,0,63	0/0:17,0:17:12.01:0,12,138	0/0:48,0:47:18.04:0,18,238	0/1:18,4:21:44.19:44,0,183	0/0:13,0:14:8.81:0,9,84	0/0:33,0:33:30.10:0,30,423	0/0:22,0:21:18.03:0,18,214	0/1:13,0:22:21.61:86,0,22	0/1:23,1:23:8.66:9,0,209	./.
chr10	98539706	.	C	CG	4287.88	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-10.393;DP=782;FS=2.375;HRun=0;HaplotypeScore=72.6024;InbreedingCoeff=0.9977;MQ=91.18;MQ0=0;MQRankSum=-2.092;QD=43.75;ReadPosRankSum=-1.103;VQSLOD=4.8810;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,184,2528	0/0:8,0:8:21.07:0,21,294	0/0:26,0:26:78.24:0,78,1060	0/0:36,0:36:99:0,102,1341	0/0:21,0:21:60.20:0,60,839	0/0:21,0:21:63.21:0,63,878	0/0:36,0:36:99:0,108,1477	1/1:0,30:30:87.28:1359,87,0	0/0:24,0:24:72.24:0,72,1006	0/0:21,0:21:60.19:0,60,824	0/0:16,0:16:48.16:0,48,667	0/0:35,0:35:99:0,102,1410	0/0:16,0:16:45.15:0,45,627	0/0:25,0:25:75.24:0,75,1033	0/0:21,0:21:63.20:0,63,863	1/1:1,30:31:42.32:1252,42,0	0/0:31,0:31:93.31:0,93,1300	0/0:23,0:23:69.22:0,69,947	0/0:29,0:29:78.26:0,78,1091	0/0:20,0:20:57.18:0,57,774	0/0:72,0:72:99:0,208,2879	0/0:26,0:26:75.24:0,75,1031	0/0:25,0:25:75.24:0,75,1031	0/0:40,0:40:99:0,120,1676	0/0:20,0:20:60.17:0,60,791	1/1:1,29:30:48.34:1341,48,0	0/0:31,0:31:93.30:0,93,1283	1/1:0,7:7:21.07:335,21,0
chr10	98541107	.	GTC	G	2163.54	PASS	AB=0.903;AC=9;AF=0.161;AN=56;BaseQRankSum=9.515;DP=799;FS=6.231;HRun=0;HaplotypeScore=107.9510;InbreedingCoeff=0.7905;MQ=81.32;MQ0=2;MQRankSum=-0.807;QD=19.49;ReadPosRankSum=-1.121;VQSLOD=3.5939;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,2:53:99:0,105,2152	0/0:8,0:8:18.05:0,18,258	0/0:47,0:43:55.41:0,55,726	0/0:45,0:37:72.60:0,73,899	0/0:23,0:23:57.16:0,57,860	0/0:15,0:15:27.09:0,27,426	0/0:32,0:32:84.11:0,84,1251	1/1:7,27:35:74.93:805,75,0	0/0:25,1:26:38.61:0,39,1132	0/0:26,2:28:7.71:0,8,915	0/0:18,1:19:11.54:0,12,667	0/0:26,1:27:32.58:0,33,1010	0/0:25,2:27:1.97:0,2,1018	0/0:31,1:32:38.57:0,39,1089	0/0:31,0:31:72.23:0,72,1144	1/1:5,17:24:54:637,54,0	0/0:34,0:35:79.17:0,79,1439	0/1:25,3:28:43.79:44,0,858	0/0:24,1:25:17.45:0,17,661	0/0:18,0:18:44.99:0,45,724	0/0:58,0:58:99:0,129,2010	0/0:24,1:25:26.56:0,27,914	0/0:15,0:15:33.11:0,33,535	0/0:34,0:34:99:0,99,1600	0/0:34,0:34:90.28:0,90,1405	1/1:0,18:18:54.17:657,54,0	0/0:28,1:29:47.63:0,48,1246	1/1:0,6:6:15.05:183,15,0
chr10	98544012	.	G	GATGGTCCTGAGT	4721.39	PASS	AB=0.678;AC=7;AF=0.125;AN=56;BaseQRankSum=-5.008;DP=783;FS=0.000;HRun=0;HaplotypeScore=255.7553;InbreedingCoeff=0.7679;MQ=76.75;MQ0=1;MQRankSum=-7.143;QD=38.08;ReadPosRankSum=-3.166;VQSLOD=3.0871;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:81.21:0,81,2465	0/0:11,0:11:27.08:0,27,789	0/0:33,0:33:27.06:0,27,576	0/0:28,0:28:29.82:0,30,450	0/0:26,0:26:51.16:0,51,1479	0/0:20,0:20:33.06:0,33,1012	0/0:28,0:28:66.20:0,66,1975	1/1:46,0:46:51.16:1680,51,0	0/0:28,0:28:60.17:0,60,1683	0/0:36,0:36:60.19:0,60,1768	0/0:19,0:19:33.03:0,33,936	0/0:32,0:32:75.26:0,75,2406	0/0:22,0:22:39.13:0,39,1247	0/0:27,0:27:48.14:0,48,1273	0/0:33,0:33:72.25:0,72,2319	1/1:12,19:35:21.07:1227,21,0	0/0:29,0:29:66.23:0,66,2183	0/0:18,0:18:33.04:0,33,799	0/0:23,0:23:18.04:0,18,543	0/0:22,0:22:30.06:0,30,862	0/0:47,0:47:90.27:0,90,2659	0/0:29,0:29:42.06:0,42,1044	0/0:25,0:25:39.07:0,39,1056	0/0:30,0:30:56.19:0,56,1686	0/0:15,0:15:27.09:0,27,877	0/1:21,13:39:59.07:1639,0,59	0/0:30,0:29:66.23:0,66,2210	1/1:1,1:3:3.01:176,3,0
chr10	98544229	.	GAC	G	1098.92	PASS	AB=0.922;AC=13;AF=0.232;AN=56;BaseQRankSum=6.072;DP=692;FS=1.075;HRun=0;HaplotypeScore=109.8923;InbreedingCoeff=0.4715;MQ=58.39;MQ0=6;MQRankSum=-3.030;QD=6.11;ReadPosRankSum=-1.263;VQSLOD=3.2112;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:42.08:0,42,618	0/1:7,1:8:28.47:28,0,240	0/0:52,0:19:24.02:0,24,309	0/0:43,1:18:11.71:0,12,101	0/1:11,1:12:11.77:12,0,308	0/0:19,0:19:41.86:0,42,634	0/1:36,2:39:7.86:8,0,972	1/1:13,7:23:41.77:437,42,0	0/1:23,1:24:36.31:36,0,665	0/0:33,1:34:29.89:0,30,1178	0/0:7,0:7:18.06:0,18,280	0/0:30,0:31:58.03:0,58,1045	0/0:26,1:27:30.24:0,30,939	0/0:24,1:25:30.24:0,30,943	0/0:23,0:23:51.15:0,51,779	1/1:3,10:14:24:262,24,0	0/0:32,1:35:9.76:0,10,898	0/0:22,0:22:60.11:0,60,889	0/0:12,0:12:24.08:0,24,379	0/0:13,0:13:24.08:0,24,381	0/0:76,2:75:38.91:0,39,1998	0/0:22,1:23:27.11:0,27,887	0/0:9,0:9:18.06:0,18,272	0/1:37,4:41:56.47:56,0,1079	0/0:22,0:22:54.14:0,54,794	1/1:7,10:17:30.09:360,30,0	0/0:8,0:8:18.06:0,18,288	1/1:0,2:2:6.02:72,6,0
chr10	98544258	.	GCA	G	352.60	PASS	AB=0.946;AC=8;AF=0.143;AN=56;BaseQRankSum=7.457;DP=779;FS=0.000;HRun=0;HaplotypeScore=142.2816;InbreedingCoeff=0.4300;MQ=55.79;MQ0=13;MQRankSum=-4.599;QD=2.63;ReadPosRankSum=-1.352;VQSLOD=2.4608;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:28:23.70:0,24,904	0/0:12,0:12:27.09:0,27,442	0/0:33,0:10:17.83:0,18,188	0/1:57,1:21:11.72:12,0,266	0/0:14,0:14:30.05:0,30,461	0/0:22,0:22:41.32:0,41,623	0/0:42,0:42:99:0,99,1570	0/1:21,0:20:50.08:126,0,50	0/0:29,0:29:78.06:0,78,1204	0/0:39,0:39:93.22:0,93,1401	0/0:7,0:7:18.06:0,18,284	0/0:28,0:28:63.07:0,63,949	0/0:32,0:32:61.10:0,61,1261	0/0:33,0:33:84.29:0,84,1377	0/0:25,0:26:56.98:0,57,849	0/0:15,0:21:17.61:0,18,156	0/0:33,0:33:55.45:0,55,1154	0/0:27,0:27:78.14:0,78,1199	0/0:15,0:10:21.07:0,21,331	0/1:13,1:14:3.38:3,0,464	0/0:91,3:93:65.61:0,66,2896	0/0:23,0:22:51.07:0,51,808	0/1:11,2:13:13.66:14,0,306	0/0:41,1:42:58.39:0,58,1462	0/0:32,0:31:75.23:0,75,1185	1/1:22,0:21:13.05:235,13,0	0/0:11,0:11:30.10:0,30,491	1/1:6,0:6:14.27:101,14,0
chr10	98544271	.	CAT	C	1371.05	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=9.728;DP=843;FS=5.805;HRun=0;HaplotypeScore=149.3084;InbreedingCoeff=0.8188;MQ=53.04;MQ0=17;MQRankSum=-4.320;QD=18.04;ReadPosRankSum=-3.236;VQSLOD=3.0063;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:19.62:0,20,1037	0/0:12,0:12:32.93:0,33,554	0/0:41,0:11:30.01:0,30,367	0/0:60,0:18:20.45:0,20,384	0/0:13,0:13:25.95:0,26,451	0/0:26,0:26:29.30:0,29,625	0/0:43,0:43:99:0,111,1802	1/1:11,10:19:23.97:452,24,0	0/0:30,0:30:70.47:0,70,1330	0/0:36,0:36:77.23:0,77,1511	0/0:11,0:11:29.93:0,30,368	0/0:30,0:30:58.90:0,59,994	0/0:34,0:34:51.37:0,51,1357	0/0:37,0:37:73.45:0,73,1495	0/0:25,0:25:28.17:0,28,948	0/1:19,0:19:26.52:27,0,69	0/0:34,0:34:83.14:0,83,1338	0/0:28,0:28:76.62:0,77,1304	0/0:20,0:14:35.94:0,36,390	0/0:17,0:17:11:0,11,550	0/0:108,0:106:99:0,188,3346	0/0:23,0:22:53.24:0,53,922	0/0:15,0:15:19.03:0,19,387	0/0:46,0:46:99:0,100,1777	0/0:31,0:30:77.44:0,77,1362	1/1:18,11:28:74.79:800,75,0	0/0:13,0:13:36.08:0,36,593	1/1:4,3:7:21.01:241,21,0
chr10	98544301	.	TAC	T	230.42	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=6.108;DP=774;FS=11.179;HRun=0;HaplotypeScore=144.7038;InbreedingCoeff=0.5881;MQ=50.48;MQ0=38;MQRankSum=-4.582;QD=6.98;ReadPosRankSum=-2.173;VQSLOD=2.0374;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:22:54.18:0,54,930	0/0:13,0:13:33.11:0,33,561	0/0:33,0:3:8.94:0,9,99	0/0:33,0:8:9.03:0,9,156	0/0:12,0:11:32.70:0,33,507	0/0:26,0:26:42.55:0,43,605	0/0:47,0:47:99:0,128,2044	0/1:24,0:21:25.90:26,0,205	0/0:29,0:29:69.15:0,69,1089	0/0:37,0:33:80.84:0,81,1284	0/0:11,0:11:24.06:0,24,379	0/0:35,0:34:68.49:0,68,1109	0/0:31,0:31:68.01:0,68,1105	0/0:35,0:34:67.53:0,68,1038	0/0:29,0:27:68.64:0,69,1048	1/1:1,8:9:26.95:310,27,0	0/0:31,0:30:87.28:0,87,1475	0/0:22,0:22:39.35:0,39,682	0/0:16,0:13:27.06:0,27,409	0/0:16,0:15:31.97:0,32,579	0/0:96,0:88:99:0,215,3383	0/0:26,0:24:60.12:0,60,1032	0/0:16,0:14:36.10:0,36,582	0/0:45,0:44:99:0,111,1775	0/0:29,0:29:73.44:0,73,1155	0/0:27,0:26:27.83:0,28,260	0/0:15,0:15:39.13:0,39,675	0/0:6,0:6:14.85:0,15,106
chr10	98544303	.	C	CAT	1802.09	PASS	AB=0.634;AC=5;AF=0.089;AN=56;BaseQRankSum=6.608;DP=778;FS=14.332;HRun=0;HaplotypeScore=143.2625;InbreedingCoeff=0.6823;MQ=50.09;MQ0=45;MQRankSum=-5.895;QD=31.07;ReadPosRankSum=-3.578;VQSLOD=3.9605;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:21:53.25:0,53,821	0/0:12,0:12:33.11:0,33,494	0/0:35,0:3:2.15:0,2,60	0/0:34,0:8:6.49:0,6,135	0/0:13,0:11:32.32:0,32,466	0/0:26,0:26:45.57:0,46,604	0/0:47,0:47:99:0,134,1874	1/1:6,20:22:57.56:983,58,0	0/0:30,0:30:75.13:0,75,1029	0/0:37,0:32:90.19:0,90,1234	0/0:10,0:10:23.27:0,23,306	0/0:35,0:33:78.65:0,79,1089	0/0:31,0:31:81.19:0,81,1111	0/0:34,0:33:73.05:0,73,990	0/0:28,0:26:69.66:0,70,956	0/0:9,0:9:17.57:0,18,88	0/0:32,0:30:87.27:0,87,1305	0/0:22,0:22:59.90:0,60,725	0/0:16,0:13:39.03:0,39,490	0/0:19,0:18:28.06:0,28,536	0/0:96,0:88:99:0,219,3067	0/0:25,0:23:60.20:0,60,916	0/0:16,0:14:36.09:0,36,525	0/0:45,0:44:99:0,117,1671	0/0:29,0:28:75.22:0,75,1099	0/1:11,15:25:8.56:769,0,9	0/0:15,0:15:39.13:0,39,596	1/1:3,3:6:8.21:173,8,0
chr10	98544382	.	GCACA	G	543.29	PASS	AB=0.775;AC=4;AF=0.071;AN=56;BaseQRankSum=5.316;DP=703;FS=5.393;HRun=0;HaplotypeScore=153.3824;InbreedingCoeff=0.3070;MQ=49.95;MQ0=38;MQRankSum=-6.506;QD=12.94;ReadPosRankSum=0.591;VQSLOD=2.7630;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:63.15:0,63,1501	0/0:15,0:13:27.09:0,27,603	0/0:36,0:12:34.66:0,35,606	0/0:27,0:5:9.03:0,9,175	0/0:18,0:17:38.67:0,39,977	0/0:25,0:23:38.50:0,38,914	0/0:34,0:35:81.02:0,81,1877	0/0:11,0:9:22.56:0,23,524	0/0:40,0:37:84.08:0,84,1985	0/0:29,0:25:66.70:0,67,1596	0/0:10,0:8:24.08:0,24,607	0/0:28,0:26:50.46:0,50,1259	0/0:30,0:29:72:0,72,1577	0/0:36,0:37:69.23:0,69,1669	0/0:30,0:29:74.62:0,75,1751	1/1:6,6:11:5.06:198,5,0	0/0:23,0:25:62.58:0,63,1245	0/0:19,0:20:53.76:0,54,1221	0/0:16,0:8:21.07:0,21,528	0/0:6,0:7:12.04:0,12,265	0/0:82,0:83:99:0,192,4540	0/0:18,0:16:34.27:0,34,751	0/0:14,0:14:28.34:0,28,680	0/0:44,0:48:93.27:0,93,2096	0/0:18,0:17:46.40:0,46,1044	0/1:8,11:18:99:423,0,206	0/1:10,1:8:27.37:27,0,444	0/0:2,0:2:3.90:0,4,78
chr10	98544419	.	GAA	G	318.12	PASS	AB=0.817;AC=5;AF=0.089;AN=56;BaseQRankSum=2.450;DP=651;FS=0.000;HRun=2;HaplotypeScore=123.2902;InbreedingCoeff=-0.1045;MQ=46.50;MQ0=51;MQRankSum=-3.926;QD=5.89;ReadPosRankSum=-0.832;VQSLOD=-0.4290;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:64.34:0,64,1177	0/0:9,0:8:19.33:0,19,356	0/0:23,1:3:3.01:0,3,61	0/1:20,0:2:11.32:11,0,37	0/0:16,0:16:30.09:0,30,560	0/0:22,0:21:41.93:0,42,666	0/0:32,0:29:80.90:0,81,1431	0/1:5,6:9:99:244,0,116	0/0:42,0:40:92.76:0,93,1931	0/0:25,0:23:63.36:0,63,1071	0/0:15,0:14:30.05:0,30,550	0/0:33,0:32:71.23:0,71,1154	0/0:27,0:26:75.04:0,75,1301	0/0:28,0:28:64.78:0,65,1170	0/0:37,0:35:82.11:0,82,1492	0/1:7,1:8:30.16:30,0,110	0/0:25,0:23:62.99:0,63,1153	0/0:25,0:23:60.19:0,60,1165	0/0:14,0:10:30.08:0,30,537	0/0:11,0:10:21.82:0,22,305	0/0:86,0:73:99:0,180,3276	0/0:12,0:10:22.29:0,22,357	0/0:12,0:12:19.83:0,20,370	0/0:45,0:42:90.54:0,91,1752	0/0:15,0:15:28.30:0,28,488	0/1:9,3:10:99:115,0,198	0/0:9,0:8:27.08:0,27,505	0/1:2,1:3:32.97:33,0,93
chr10	98544514	.	G	GCA	228.38	PASS	AB=0.819;AC=5;AF=0.100;AN=50;BaseQRankSum=3.190;DP=567;FS=0.000;HRun=0;HaplotypeScore=134.5840;InbreedingCoeff=0.2561;MQ=33.53;MQ0=93;MQRankSum=-3.440;QD=3.68;ReadPosRankSum=-0.003;VQSLOD=2.5479;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:14:14.03:0,14,155	0/1:8,0:6:23.08:23,0,124	./.	./.	0/0:10,0:9:15.05:0,15,182	0/0:15,0:13:12.03:0,12,147	0/0:25,0:20:18.18:0,18,219	1/1:15,3:4:3.01:49,3,0	0/0:32,0:29:38.44:0,38,427	0/0:18,0:12:22.75:0,23,217	0/0:15,0:8:10.16:0,10,106	0/0:27,0:25:22.10:0,22,226	0/0:13,0:13:11.69:0,12,144	0/0:27,0:26:26.64:0,27,303	0/0:19,0:16:22.74:0,23,229	0/1:19,9:23:27.78:129,0,28	0/0:22,0:18:18.66:0,19,321	0/0:18,0:16:41.37:0,41,442	0/0:16,0:9:2.09:0,2,238	0/0:9,0:5:6.02:0,6,72	0/0:84,0:64:69.17:0,69,787	0/0:17,0:11:15.04:0,15,179	./.	0/0:36,1:33:39.12:0,39,479	0/0:13,0:10:8.44:0,8,111	0/0:13,3:6:12.03:0,12,141	0/0:10,0:10:17.84:0,18,190	0/1:3,3:4:1.48:135,0,1
chr10	98544536	.	GCA	G	36.59	PASS	AB=0.952;AC=9;AF=0.173;AN=52;BaseQRankSum=4.413;DP=655;FS=9.140;HRun=0;HaplotypeScore=127.1123;InbreedingCoeff=0.2486;MQ=41.97;MQ0=68;MQRankSum=-4.110;QD=0.31;ReadPosRankSum=-0.194;VQSLOD=2.1021;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:28:13.21:0,13,725	0/0:7,0:6:15.05:0,15,227	./.	./.	0/0:13,1:12:22.77:0,23,304	0/0:16,0:14:30.07:0,30,414	0/0:28,0:25:53.60:0,54,818	1/1:12,2:2:6.01:57,6,0	0/0:34,1:33:51.04:0,51,982	0/0:19,0:14:36.06:0,36,521	0/0:14,0:11:15.78:0,16,193	0/0:27,1:23:0.92:0,1,453	0/0:17,0:16:30.06:0,30,468	0/0:29,0:28:49.36:0,49,811	0/1:20,1:19:1.69:2,0,470	0/0:20,0:24:17.46:0,17,228	0/0:27,0:24:54.12:0,54,890	0/1:25,2:24:12.12:12,0,837	0/1:22,1:12:7.78:8,0,364	0/0:20,1:16:10.31:0,10,615	0/0:102,0:80:99:0,168,2619	0/0:25,0:19:38.23:0,38,545	0/1:16,0:12:13.04:13,0,325	0/0:42,1:40:46.79:0,47,1247	0/0:19,0:18:41.94:0,42,572	0/1:9,1:6:13.71:14,0,133	0/0:11,0:11:26.77:0,27,354	1/1:3,2:4:5.88:57,6,0
chr10	98545296	.	A	ACGTTTAGGTTCACT	3228.29	PASS	AB=0.750;AC=37;AF=0.974;AN=38;BaseQRankSum=-1.878;DP=45;FS=10.503;HRun=0;HaplotypeScore=21.1044;InbreedingCoeff=-0.1658;MQ=122.59;MQ0=0;MQRankSum=-1.878;QD=76.86;ReadPosRankSum=0.159;VQSLOD=1.0438;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:6.02:153,6,0	1/1:1,0:1:3.01:89,3,0	1/1:2,1:5:15.04:648,15,0	0/1:4,0:6:51.56:632,0,52	1/1:1,0:1:3.01:67,3,0	1/1:1,0:1:3.01:69,3,0	./.	1/1:3,0:4:9.03:267,9,0	./.	./.	./.	./.	1/1:1,0:1:3.01:70,3,0	./.	1/1:1,0:1:3.01:68,3,0	1/1:5,0:5:12.01:206,12,0	1/1:1,0:2:6.02:188,6,0	./.	1/1:2,0:3:9.01:220,9,0	1/1:1,0:1:3:25,3,0	1/1:1,0:1:3.01:89,3,0	1/1:1,0:1:3:25,3,0	1/1:1,0:2:6.01:128,6,0	1/1:1,0:1:3.01:82,3,0	./.	1/1:1,0:2:6.02:227,6,0	1/1:1,0:1:3.01:62,3,0	./.
chr10	98547124	.	AGAAGCAGG	A	129.77	PASS	AC=4;AF=0.40;AN=10;BaseQRankSum=-1.957;DP=108;FS=0.000;HRun=0;HaplotypeScore=15.3436;MQ=16.71;MQ0=55;MQRankSum=0.615;QD=16.22;ReadPosRankSum=1.957;VQSLOD=0.6157;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:28,0:7:21.07:0,21,449	0/0:40,0:7:20.98:0,21,375	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:6,0:2:2.85:51,3,0	1/1:2,0:2:6.02:158,6,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/0:3,0:2:6.02:0,6,108
chr10	98547130	.	AGG	A	172.07	PASS	AC=18;AF=0.750;AN=24;BaseQRankSum=1.449;DP=114;FS=2.593;HRun=2;HaplotypeScore=10.8720;InbreedingCoeff=0.4512;MQ=21.32;MQ0=50;MQRankSum=2.925;QD=7.48;ReadPosRankSum=-1.713;VQSLOD=-0.1325;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:27,0:7:21.07:0,21,305	0/0:38,0:7:20.98:0,21,270	./.	./.	1/1:1,0:1:2.96:19,3,0	./.	1/1:1,0:1:2.92:17,3,0	./.	./.	./.	1/1:2,0:2:3.01:43,3,0	1/1:1,0:1:2.04:6,2,0	./.	./.	1/1:6,1:4:2.72:17,3,0	1/1:2,0:2:6.02:75,6,0	./.	./.	./.	1/1:2,0:2:2.99:23,3,0	./.	1/1:3,2:3:3.01:40,3,0	./.	./.	1/1:2,0:1:3.01:36,3,0	0/0:3,0:2:6.02:0,6,90
chr10	98547730	.	CTTCTCT	C	222.27	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.681;DP=730;FS=11.508;HRun=0;HaplotypeScore=143.5967;InbreedingCoeff=0.9292;MQ=58.73;MQ0=16;MQRankSum=-4.161;QD=10.58;ReadPosRankSum=-3.502;VQSLOD=0.9142;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:99:0,132,4178	0/0:6,0:6:18.04:0,18,544	0/0:45,0:17:35.18:0,35,1155	0/0:61,0:29:68.16:0,68,1917	0/0:16,0:16:48.15:0,48,1348	0/0:20,0:19:57.20:0,57,1955	0/0:28,0:28:84.27:0,84,2467	1/1:6,0:5:12.52:97,13,0	0/0:37,0:36:99:0,108,3418	0/0:25,0:25:75.25:0,75,2133	0/0:18,0:18:51.17:0,51,1387	0/0:34,0:34:99:0,102,2810	0/0:34,0:33:99:0,99,3123	0/0:31,0:31:93.27:0,93,2745	0/0:27,0:27:81.26:0,81,2573	1/1:1,7:8:12.04:150,12,0	0/0:46,0:46:99:0,113,4045	0/0:26,0:26:75.16:0,75,2261	0/0:16,0:15:42.14:0,42,1106	0/0:24,0:24:69.16:0,69,2067	0/0:41,0:41:99:0,120,3500	0/0:27,0:27:71.83:0,72,2297	0/0:23,0:23:63.22:0,63,2134	0/0:39,0:39:99:0,117,3745	0/0:16,0:16:45.14:0,45,1330	1/1:5,0:4:9.49:94,9,0	0/0:23,0:23:69.20:0,69,2068	1/1:2,0:2:5.12:23,5,0
chr10	98549412	.	AC	A	2466.30	PASS	AB=0.906;AC=15;AF=0.268;AN=56;BaseQRankSum=6.270;DP=549;FS=2.350;HRun=10;HaplotypeScore=58.2953;InbreedingCoeff=0.6207;MQ=62.35;MQ0=0;MQRankSum=0.378;QD=13.19;ReadPosRankSum=4.463;VQSLOD=3.5391;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,32:42:80.94:703,81,0	0/0:12,0:12:18.05:0,18,199	0/0:21,1:16:0.77:0,1,184	0/0:23,0:20:7.66:0,8,215	0/1:11,2:13:25.05:25,0,196	0/1:21,1:22:9.17:9,0,345	0/0:28,2:30:20.04:0,20,658	1/1:7,10:17:29.98:260,30,0	0/0:27,0:27:26.68:0,27,712	0/0:13,0:13:24.05:0,24,255	0/0:14,0:14:30.08:0,30,332	0/0:19,3:22:25.03:0,25,477	0/0:15,0:15:33.04:0,33,351	0/0:20,1:21:19.17:0,19,431	0/0:15,0:15:36.09:0,36,390	1/1:1,19:20:53.99:469,54,0	0/1:15,2:17:19.01:19,0,265	1/1:4,24:29:65.02:553,65,0	0/0:12,0:12:3.52:0,4,212	0/0:11,0:11:27.06:0,27,290	0/0:21,2:23:22.03:0,22,446	0/0:18,1:19:10.01:0,10,321	0/0:21,0:21:47.77:0,48,513	0/0:21,0:21:45.25:0,45,490	0/0:19,0:19:47.77:0,48,490	1/1:2,23:25:68.92:586,69,0	0/0:22,0:22:42.05:0,42,464	1/1:1,1:2:3:26,3,0
chr10	98549804	.	CCA	C	2676.93	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.391;DP=678;FS=3.105;HRun=0;HaplotypeScore=98.3117;InbreedingCoeff=0.9971;MQ=74.43;MQ0=0;MQRankSum=-1.095;QD=38.24;ReadPosRankSum=3.148;VQSLOD=5.9897;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:84.29:1354,84,0	0/0:14,0:14:42.11:0,42,812	0/0:17,0:17:48.15:0,48,908	0/0:24,0:24:67.94:0,68,1225	0/0:25,0:25:69.71:0,70,1334	0/0:20,0:20:57.18:0,57,1097	0/0:23,0:23:66.23:0,66,1323	0/0:20,0:20:60.21:0,60,1191	0/0:19,0:19:54.18:0,54,1058	0/0:26,0:26:75.22:0,75,1430	0/0:13,0:13:38.80:0,39,739	0/0:27,0:27:81.28:0,81,1604	0/0:20,0:20:60.20:0,60,1191	0/0:21,0:21:57.07:0,57,1011	0/0:23,0:23:63.22:0,63,1248	1/1:0,15:15:42.14:684,42,0	0/0:49,0:49:99:0,131,2612	1/1:0,17:17:48.16:782,48,0	0/0:22,0:22:66.23:0,66,1275	0/0:32,0:32:95.08:0,95,1736	0/0:50,0:50:99:0,148,2960	0/0:26,0:26:75.25:0,75,1428	0/0:21,0:21:62.80:0,63,1131	0/0:30,0:30:81.28:0,81,1641	0/0:36,0:36:99:0,105,1803	0/0:22,0:22:63.22:0,63,1255	0/0:22,0:22:63.21:0,63,1228	0/0:6,0:6:18.06:0,18,366
chr10	98550941	.	AAG	A	69.29	PASS	AB=0.667;AC=5;AF=0.089;AN=56;BaseQRankSum=8.717;DP=1125;FS=42.121;HRun=0;HaplotypeScore=322.3219;InbreedingCoeff=0.5698;MQ=47.22;MQ0=23;MQRankSum=-6.982;QD=5.77;ReadPosRankSum=0.542;VQSLOD=1.7565;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:2:3.90:48,4,0	0/0:14,0:14:27.95:0,28,440	0/0:50,0:8:14.02:0,14,279	0/0:47,1:20:37.65:0,38,619	0/0:43,1:43:84.59:0,85,1334	0/0:25,0:25:57.19:0,57,1125	0/0:48,1:49:99:0,132,2348	0/0:41,0:37:88.71:0,89,1846	0/0:36,1:37:95.12:0,95,1784	0/0:60,1:60:99:0,118,2824	0/0:29,0:29:63.14:0,63,1114	0/0:53,2:55:99:0,113,2506	0/0:57,0:57:99:0,127,2222	0/0:41,0:41:86.14:0,86,1774	0/0:53,0:52:99:0,144,2578	1/1:4,0:4:2.18:23,2,0	0/0:31,1:32:16.96:0,17,1602	0/1:2,2:4:23.09:103,0,23	0/0:37,0:23:29.41:0,29,1206	0/0:45,1:45:99:0,103,1980	0/0:100,3:101:99:0,250,4802	0/0:56,1:57:99:0,142,2505	0/0:44,0:44:99:0,100,1719	0/0:51,3:54:98.32:0,98,1976	0/0:39,1:39:99:0,102,1678	0/0:43,0:43:47.62:0,48,1928	0/0:36,0:36:89.82:0,90,1454	0/0:15,1:16:14.84:0,15,635
chr10	98550958	.	CAA	C	40.89	PASS	AB=0.920;AC=5;AF=0.089;AN=56;BaseQRankSum=9.679;DP=1204;FS=83.282;HRun=3;HaplotypeScore=296.0487;InbreedingCoeff=0.0574;MQ=45.46;MQ0=30;MQRankSum=-5.503;QD=0.45;ReadPosRankSum=-2.827;VQSLOD=-0.6366;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:2:4.77:5,0,7	0/0:16,1:16:33.45:0,33,391	0/0:55,0:5:15:0,15,194	0/1:59,1:15:23.59:24,0,308	0/0:45,0:45:59.47:0,59,1343	0/0:27,0:27:72.02:0,72,1126	0/0:46,0:46:99:0,124,1884	0/0:51,0:45:99:0,123,1852	0/0:41,1:42:75.39:0,75,1796	0/0:60,0:58:99:0,113,2177	0/0:31,0:31:65.22:0,65,913	0/0:57,0:57:99:0,113,2198	0/0:50,0:49:99:0,111,1902	0/0:45,0:45:99:0,122,1913	0/0:59,0:58:99:0,165,2486	0/1:2,2:4:16.32:65,0,16	0/0:34,0:34:47.91:0,48,1587	0/1:4,0:4:5.76:29,0,6	0/0:36,0:24:51.39:0,51,924	0/0:52,0:52:99:0,107,2075	0/0:109,1:110:99:0,248,4541	0/0:65,1:66:99:0,150,2468	0/0:47,1:48:58.41:0,58,1316	0/0:62,1:63:99:0,104,1886	0/0:41,0:39:99:0,104,1601	0/0:41,0:41:65.92:0,66,1374	0/0:37,0:37:49.49:0,49,1395	0/1:17,1:18:31.46:31,0,649
chr10	98551013	.	T	TCA	3112.21	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=-6.129;DP=973;FS=3.678;HRun=0;HaplotypeScore=184.5580;InbreedingCoeff=0.8055;MQ=47.97;MQ0=12;MQRankSum=-6.846;QD=31.44;ReadPosRankSum=-3.901;VQSLOD=3.7527;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:1:3.01:0,3,39	0/0:10,0:10:24.08:0,24,320	0/0:27,0:3:6.02:0,6,80	0/0:25,0:4:9.03:0,9,117	0/0:29,0:29:48:0,48,604	0/0:23,0:23:54.17:0,54,705	0/0:41,0:41:96.30:0,96,1258	1/1:23,29:42:99:1568,102,0	0/0:40,0:40:90.23:0,90,1150	0/0:48,0:47:99:0,109,1362	0/0:33,0:33:54.14:0,54,687	0/0:43,0:43:87.17:0,87,1155	0/0:47,0:47:88.94:0,89,1218	0/0:34,0:34:60.19:0,60,798	0/0:53,0:52:99:0,111,1436	./.	0/0:30,0:29:66.16:0,66,846	1/1:1,0:1:2.96:19,3,0	0/0:29,0:21:54.15:0,54,695	0/0:41,0:40:99:0,102,1329	0/0:120,0:119:99:0,279,3632	0/0:50,0:50:81.22:0,81,1036	0/0:33,0:33:54.10:0,54,671	0/0:51,0:51:99:0,129,1668	0/0:35,0:35:68.44:0,68,879	1/1:15,20:35:2.95:1197,3,0	0/0:31,0:31:81.27:0,81,1072	1/1:2,9:11:27.09:468,27,0
chr10	98551094	.	C	CAT	169.13	PASS	AB=0.733;AC=3;AF=0.054;AN=56;BaseQRankSum=6.809;DP=1023;FS=44.391;HRun=0;HaplotypeScore=204.4587;InbreedingCoeff=0.5328;MQ=52.04;MQ0=15;MQRankSum=-5.647;QD=5.83;ReadPosRankSum=0.006;VQSLOD=1.5309;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,3:7:6.78:41,7,0	0/0:15,0:15:38.66:0,39,484	0/0:32,0:7:14.96:0,15,152	0/0:33,0:10:20.20:0,20,201	0/0:35,0:35:54.12:0,54,715	0/0:30,0:30:78.24:0,78,1137	0/0:34,0:34:96.22:0,96,1343	0/0:52,0:44:99:0,123,1676	0/0:37,0:37:99:0,99,1426	0/0:56,0:54:99:0,162,2340	0/0:36,0:35:63.14:0,63,857	0/0:43,0:42:99:0,120,1754	0/0:34,0:34:87.26:0,87,1262	0/0:45,0:44:99:0,111,1559	0/0:46,0:45:99:0,122,1718	0/1:14,8:22:67.91:223,0,68	0/0:45,0:45:99:0,130,1869	0/0:3,0:3:1.55:0,2,4	0/0:33,0:26:68.93:0,69,875	0/0:32,0:31:87.28:0,87,1278	0/0:89,0:90:99:0,246,3333	0/0:43,0:43:96.22:0,96,1383	0/0:30,0:30:66.18:0,66,947	0/0:60,0:60:99:0,153,2233	0/0:42,0:42:93.68:0,94,1268	0/0:39,0:39:99:0,111,1561	0/0:36,0:35:83.60:0,84,1117	0/0:13,0:13:36.07:0,36,516
chr10	98551122	.	CAT	C	413.87	PASS	AB=0.819;AC=6;AF=0.107;AN=56;BaseQRankSum=5.455;DP=1016;FS=42.023;HRun=0;HaplotypeScore=182.9903;InbreedingCoeff=0.5262;MQ=52.99;MQ0=8;MQRankSum=-6.427;QD=4.87;ReadPosRankSum=-2.471;VQSLOD=0.9823;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,8:11:5.79:133,6,0	0/0:18,0:18:39.12:0,39,715	0/0:48,0:21:56.60:0,57,971	0/0:35,0:18:50.67:0,51,848	0/0:38,0:38:66.09:0,66,1174	0/0:28,0:28:81.28:0,81,1561	0/0:29,0:29:84.26:0,84,1533	0/1:46,0:40:18.57:19,0,614	0/0:33,0:33:99:0,99,1839	0/0:59,0:58:99:0,169,3058	0/0:23,0:22:45.07:0,45,850	0/0:46,0:45:99:0,126,2265	0/0:32,0:32:93.30:0,93,1721	0/0:47,0:46:99:0,132,2403	0/0:48,0:48:99:0,141,2614	0/1:10,13:23:61.96:237,0,62	0/0:47,0:47:99:0,132,2344	1/1:2,3:5:11.99:149,12,0	0/0:28,0:24:72.20:0,72,1293	0/0:32,0:32:75.14:0,75,1347	0/0:81,0:81:99:0,214,3886	0/0:41,0:41:99:0,108,1969	0/0:34,0:34:72.25:0,72,1364	0/0:60,0:60:99:0,153,2799	0/0:39,0:39:96.27:0,96,1768	0/0:34,0:34:44.87:0,45,808	0/0:33,0:32:62.25:0,62,1503	0/0:17,0:17:4.01:0,4,334
chr10	98551154	.	G	GAT	1808.44	PASS	AB=0.596;AC=5;AF=0.089;AN=56;BaseQRankSum=2.566;DP=1010;FS=51.281;HRun=0;HaplotypeScore=158.0418;InbreedingCoeff=0.7933;MQ=56.51;MQ0=6;MQRankSum=-4.406;QD=30.14;ReadPosRankSum=-0.828;VQSLOD=2.0338;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,9:20:24.73:701,25,0	0/0:20,0:20:54.18:0,54,771	0/0:44,0:21:62.83:0,63,773	0/0:50,0:28:69.61:0,70,803	0/0:35,0:35:90.30:0,90,1276	0/0:31,0:31:87.25:0,87,1197	0/0:30,0:30:90.25:0,90,1227	0/0:51,0:50:99:0,138,1775	0/0:40,0:40:99:0,116,1577	0/0:57,0:56:99:0,156,2123	0/0:32,0:32:81.25:0,81,1128	0/0:40,0:40:99:0,120,1578	0/0:31,0:31:84.25:0,84,1163	0/0:36,0:36:99:0,108,1427	0/0:51,0:51:99:0,147,2026	0/1:9,18:28:12.14:798,0,12	0/0:38,0:38:99:0,114,1590	1/1:0,10:10:24.08:439,24,0	0/0:31,0:26:72.19:0,72,959	0/0:35,0:35:99:0,99,1395	0/0:63,0:63:99:0,175,2403	0/0:34,0:34:93.31:0,93,1308	0/0:30,0:30:78.23:0,78,1073	0/0:48,0:48:99:0,120,1653	0/0:34,0:33:78.22:0,78,1056	0/0:35,0:35:99:0,105,1480	0/0:35,0:35:99:0,104,1402	0/0:17,0:17:51.07:0,51,664
chr10	98551669	.	A	AC	2727.94	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.752;DP=692;FS=0.000;HRun=0;HaplotypeScore=73.8505;InbreedingCoeff=0.9980;MQ=63.43;MQ0=2;MQRankSum=-1.729;QD=34.53;ReadPosRankSum=1.875;VQSLOD=3.2477;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:35:99:1546,102,0	0/0:7,0:7:21.07:0,21,293	0/0:21,0:18:43.29:0,43,609	0/0:21,0:19:30.26:0,30,591	0/0:21,0:21:63.20:0,63,863	0/0:21,0:21:60.20:0,60,838	0/0:30,0:30:87.28:0,87,1201	0/0:26,0:26:78.22:0,78,1015	0/0:25,0:25:75.24:0,75,1030	0/0:32,0:32:96.31:0,96,1322	0/0:21,0:21:63.15:0,63,840	0/0:22,0:22:66.22:0,66,918	0/0:18,0:18:54.15:0,54,735	0/0:17,0:17:51.17:0,51,712	0/0:23,0:23:69.20:0,69,904	1/1:0,0:16:27.01:239,27,0	0/0:44,0:44:99:0,132,1809	1/1:2,25:27:72.20:1086,72,0	0/0:29,0:29:84.24:0,84,1109	0/0:30,0:30:90.30:0,90,1256	0/0:29,0:29:78.25:0,78,1071	0/0:26,0:26:78.25:0,78,1074	0/0:18,0:18:54.17:0,54,736	0/0:24,0:24:72.22:0,72,966	0/0:19,0:19:57.19:0,57,795	0/0:35,0:35:99:0,105,1426	0/0:39,0:39:99:0,117,1609	0/0:15,0:15:45.14:0,45,610
chr10	98552041	.	CT	C	1979.80	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.102;DP=500;FS=2.380;HRun=4;HaplotypeScore=55.8276;InbreedingCoeff=0.9992;MQ=93.76;MQ0=0;MQRankSum=-6.045;QD=29.55;ReadPosRankSum=2.451;VQSLOD=3.7638;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:87.27:1044,87,0	0/0:10,0:10:30.10:0,30,420	0/0:26,0:26:63.19:0,63,846	0/0:18,0:18:45.15:0,45,629	0/0:12,0:12:30.09:0,30,405	0/0:22,0:22:63.19:0,63,863	0/0:19,0:19:54.18:0,54,755	0/0:26,0:26:66.19:0,66,878	0/0:15,0:15:35.79:0,36,504	0/0:15,0:15:42.14:0,42,575	0/0:15,0:15:42.14:0,42,588	0/0:18,0:18:51.17:0,51,714	0/0:21,0:21:63.17:0,63,850	0/0:11,0:11:33.08:0,33,428	0/0:19,0:19:54.17:0,54,739	1/1:2,14:16:45.14:540,45,0	0/0:22,0:22:66.22:0,66,919	1/1:1,18:19:45.14:539,45,0	0/0:17,0:17:48.12:0,48,622	0/0:12,0:12:36.12:0,36,504	0/0:28,0:28:81.23:0,81,1111	0/0:16,0:16:48.15:0,48,657	0/0:13,0:13:39.13:0,39,546	0/0:11,0:11:33.10:0,33,445	0/0:16,0:16:45.15:0,45,630	0/0:15,0:15:45.15:0,45,630	0/0:24,0:24:69.19:0,69,916	0/0:12,0:12:36.12:0,36,504
chr10	98552085	.	G	GGGGGA	1718.33	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=2.648;DP=370;FS=3.091;HRun=0;HaplotypeScore=114.1639;InbreedingCoeff=0.3219;MQ=76.54;MQ0=0;MQRankSum=-3.228;QD=19.09;ReadPosRankSum=2.291;VQSLOD=3.3028;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,3:20:26.97:477,27,0	0/1:8,0:8:1.24:1,0,87	0/0:12,0:10:12.65:0,13,111	0/0:16,0:13:18.29:0,18,153	0/0:12,0:12:5.96:0,6,45	0/1:8,0:8:11.42:11,0,38	0/0:20,0:20:3.84:0,4,28	0/0:21,0:21:27.98:0,28,299	0/0:13,0:13:4.28:0,4,49	0/0:15,0:15:9:0,9,81	0/0:9,0:9:12.21:0,12,129	0/1:11,0:11:3.12:3,0,87	0/0:8,0:8:14.98:0,15,123	0/0:11,0:11:12.88:0,13,110	0/1:12,0:12:39.14:39,0,56	1/1:17,0:17:50.78:648,51,0	0/0:22,0:22:1.88:0,2,228	1/1:9,5:14:36.03:684,36,0	0/0:13,0:13:6.94:0,7,150	0/0:10,0:10:3.94:0,4,26	0/0:23,0:23:27.45:0,27,229	0/0:10,0:10:3:0,3,27	0/0:7,0:7:1.88:0,2,19	0/0:9,0:9:3:0,3,26	0/0:9,0:9:12.40:0,12,97	0/0:12,0:12:9.89:0,10,81	0/0:14,0:14:3:0,3,25	0/0:14,0:14:29.46:0,29,358
chr10	98552086	.	G	GGGGA	1791.81	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=0.992;DP=373;FS=2.125;HRun=0;HaplotypeScore=108.2243;InbreedingCoeff=0.4784;MQ=74.10;MQ0=0;MQRankSum=-4.309;QD=23.58;ReadPosRankSum=5.010;VQSLOD=3.5774;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,1:22:26.96:370,27,0	0/0:8,0:8:5.72:0,6,139	0/0:12,0:10:10.84:0,11,128	0/0:14,0:11:15.19:0,15,164	0/0:13,0:13:8.92:0,9,64	0/1:8,0:8:11.36:11,0,38	0/0:20,0:20:10.84:0,11,81	0/0:21,0:21:31.15:0,31,320	0/0:13,0:13:7.52:0,8,74	0/0:15,0:15:9:0,9,81	0/0:9,0:9:12.01:0,12,132	0/0:11,0:11:5.85:0,6,162	0/0:8,0:8:17.98:0,18,149	0/0:10,0:10:16.32:0,16,137	0/1:12,0:12:40.87:41,0,58	1/1:14,6:20:53.79:999,54,0	0/0:22,0:22:14:0,14,229	1/1:12,2:14:15.81:518,16,0	0/0:13,0:13:9.64:0,10,158	0/0:10,0:10:6.47:0,6,52	0/0:23,0:23:36.79:0,37,294	0/0:8,0:8:3.47:0,3,27	0/0:7,0:7:4.80:0,5,25	0/0:10,0:10:2.97:0,3,20	0/0:9,0:9:15.40:0,15,124	0/0:14,0:14:16.56:0,17,136	0/0:13,0:13:8.92:0,9,63	0/0:14,0:14:30.15:0,30,343
chr10	98555608	.	GAAAGATAA	G	804.28	PASS	AB=0.765;AC=5;AF=0.089;AN=56;BaseQRankSum=4.033;DP=680;FS=20.989;HRun=0;HaplotypeScore=205.9460;InbreedingCoeff=0.7338;MQ=49.51;MQ0=20;MQRankSum=0.522;QD=15.77;ReadPosRankSum=-1.196;VQSLOD=1.3380;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,4:30:13.72:342,14,0	0/0:12,0:12:31.36:0,31,895	0/0:35,0:8:23.97:0,24,437	0/0:29,0:7:6.22:0,6,32	0/0:41,0:41:99:0,100,2579	0/0:24,0:24:67.95:0,68,1518	0/0:17,0:16:46.82:0,47,1050	0/0:44,0:40:99:0,114,1937	0/0:16,0:16:45.15:0,45,1124	0/0:42,0:42:99:0,121,3534	0/0:26,0:26:77.07:0,77,1869	0/0:18,0:18:51.06:0,51,1035	0/0:18,0:18:54.14:0,54,1351	0/0:18,0:18:54.10:0,54,1090	0/0:16,0:16:45.03:0,45,925	0/1:9,4:13:17.95:313,0,18	0/0:24,0:24:29.16:0,29,1675	1/1:8,0:8:23.88:276,24,0	0/0:9,0:7:21.07:0,21,650	0/0:37,0:36:95.99:0,96,2660	0/0:9,0:9:27.09:0,27,1017	0/0:19,0:19:21.94:0,22,1409	0/0:28,0:28:76.11:0,76,1646	0/0:12,0:12:19.31:0,19,598	0/0:32,0:32:80.43:0,80,2069	0/0:28,0:28:84.27:0,84,2422	0/0:36,0:36:90.98:0,91,2455	0/0:39,0:37:99:0,106,3140
chr10	98555734	.	G	GAGAT	1934.66	PASS	AB=0.889;AC=14;AF=0.269;AN=52;BaseQRankSum=-7.073;DP=532;FS=2.414;HRun=0;HaplotypeScore=123.6818;InbreedingCoeff=0.7843;MQ=57.63;MQ0=5;MQRankSum=0.637;QD=12.24;ReadPosRankSum=1.584;VQSLOD=3.0417;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:35:30.10:0,30,460	0/0:1,0:7:13.57:0,14,116	./.	./.	0/0:22,0:22:21.07:0,21,323	0/0:16,0:17:25.64:0,26,369	1/1:5,0:5:2.99:24,3,0	1/1:30,0:30:3.01:43,3,0	0/0:21,0:20:42.13:0,42,623	1/1:17,8:25:24.06:512,24,0	0/1:10,1:14:0:0,0,0	0/0:15,0:15:15.05:0,15,230	0/0:20,0:20:30.10:0,30,455	0/0:12,0:12:24.06:0,24,344	0/0:17,0:17:24.08:0,24,366	1/1:11,12:23:21.07:490,21,0	0/0:23,0:24:33.10:0,33,480	0/1:22,0:22:4.95:5,0,465	0/0:14,0:14:15.05:0,15,230	0/0:30,0:33:54.16:0,54,772	0/0:15,0:17:24.07:0,24,327	0/0:12,0:12:15.05:0,15,226	0/0:28,0:28:39.09:0,39,532	0/0:8,0:9:6.01:0,6,74	0/0:22,0:22:27.09:0,27,405	1/1:10,9:19:30.10:657,30,0	0/0:27,0:27:48.13:0,48,692	1/1:16,4:19:18.06:371,18,0
chr10	98555922	.	C	CT	1016.38	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.733;DP=551;FS=2.909;HRun=10;HaplotypeScore=53.2044;InbreedingCoeff=0.9871;MQ=69.94;MQ0=0;MQRankSum=-0.815;QD=18.82;ReadPosRankSum=0.849;VQSLOD=4.3948;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:24:32.50:551,32,0	0/0:10,0:10:26.97:0,27,222	0/0:11,0:11:18.50:0,18,177	0/0:7,0:7:13.41:0,13,85	0/0:28,0:28:65.90:0,66,542	0/0:25,0:25:65.50:0,66,527	0/0:15,0:15:35.95:0,36,296	0/0:29,0:30:55.95:0,56,448	0/0:20,0:20:50.72:0,51,407	0/0:26,0:26:62.89:0,63,517	0/0:22,0:22:56.89:0,57,466	0/0:11,0:11:32.96:0,33,271	0/0:16,0:16:44.94:0,45,369	0/0:16,0:16:32.92:0,33,271	0/0:19,1:20:27.95:0,28,436	1/1:3,13:16:27.07:288,27,0	0/0:19,0:20:49.82:0,50,387	1/1:2,12:14:30.08:320,30,0	0/0:15,0:15:41.94:0,42,342	0/0:25,0:26:58.92:0,59,470	0/0:13,0:13:32.93:0,33,267	0/0:23,0:24:27.32:0,27,418	0/0:25,0:26:58.95:0,59,474	0/0:10,0:10:29.94:0,30,242	0/0:17,0:17:41.93:0,42,345	0/0:35,0:37:93.33:0,93,734	0/0:31,1:32:57.88:0,58,679	0/0:19,0:19:44.89:0,45,364
chr10	98556739	.	A	ATTGGTTGG	1286.59	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=0.369;DP=654;FS=6.730;HRun=0;HaplotypeScore=152.2830;InbreedingCoeff=0.6824;MQ=53.40;MQ0=17;MQRankSum=-4.456;QD=21.44;ReadPosRankSum=-0.980;VQSLOD=2.5671;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,5:26:36:923,36,0	0/0:4,0:4:2.99:0,3,23	0/0:40,0:7:4.73:0,5,95	0/0:38,0:19:21.20:0,21,187	0/0:14,0:14:27:0,27,515	0/0:26,0:26:65.80:0,66,1279	0/0:32,0:31:57.14:0,57,1138	0/0:16,0:16:29.73:0,30,446	0/0:19,0:19:27.09:0,27,652	0/0:20,0:20:37.93:0,38,845	0/1:6,0:6:7.98:8,0,187	0/0:26,0:26:42.11:0,42,917	0/0:16,0:16:36.05:0,36,723	0/0:19,0:19:39.06:0,39,709	0/0:8,0:8:15.01:0,15,298	0/0:15,0:13:24.01:0,24,522	0/0:43,0:43:93.17:0,93,2007	1/1:22,1:24:29.97:481,30,0	0/0:21,0:15:13.89:0,14,383	0/0:15,0:15:27.08:0,27,589	0/0:65,0:63:99:0,111,2156	0/0:14,0:14:30.03:0,30,548	0/0:15,0:14:20.92:0,21,443	0/0:49,0:49:96.15:0,96,2070	0/0:18,0:18:16.11:0,16,751	0/0:24,0:24:28.80:0,29,617	0/0:29,0:29:54.10:0,54,1005	0/0:8,0:7:14.98:0,15,270
chr10	98556787	.	T	TTTGC	915.39	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.102;DP=611;FS=4.991;HRun=0;HaplotypeScore=109.2064;InbreedingCoeff=0.9531;MQ=63.57;MQ0=3;MQRankSum=-5.293;QD=17.60;ReadPosRankSum=0.073;VQSLOD=3.2445;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,8:22:18.06:438,18,0	0/0:10,0:10:30.10:0,30,491	0/0:33,0:28:33.11:0,33,499	0/0:39,0:30:31.35:0,31,566	0/0:14,0:14:33.09:0,33,514	0/0:29,0:29:41.55:0,42,913	0/0:36,0:36:78.27:0,78,1272	0/0:29,0:29:39.10:0,39,588	0/0:20,0:20:45.14:0,45,712	0/0:28,0:28:60.20:0,60,981	0/0:12,0:12:27.09:0,27,440	0/0:18,0:18:42.14:0,42,686	0/0:11,0:11:12.04:0,12,197	0/0:15,0:15:27.09:0,27,442	0/0:13,0:13:24.08:0,24,365	1/1:5,6:9:18.06:393,18,0	0/0:43,0:43:87.27:0,87,1392	1/1:12,4:16:9.03:219,9,0	0/0:18,0:18:24.08:0,24,390	0/0:18,0:18:33.11:0,33,541	0/0:40,0:40:78.25:0,78,1253	0/0:14,0:14:27.09:0,27,440	0/0:11,0:11:27.09:0,27,442	0/0:38,0:38:81.28:0,81,1320	0/0:18,0:18:39.13:0,39,636	0/0:23,0:23:51.17:0,51,834	0/0:20,0:20:51.17:0,51,835	0/0:9,0:8:15.05:0,15,243
chr10	98556822	.	T	TGG	642.52	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.659;DP=520;FS=0.853;HRun=8;HaplotypeScore=68.5421;InbreedingCoeff=0.9722;MQ=74.91;MQ0=1;MQRankSum=-2.951;QD=18.36;ReadPosRankSum=-3.102;VQSLOD=1.1016;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,3:14:20.04:252,20,0	0/0:10,0:10:24.05:0,24,267	0/0:18,0:17:33.26:0,33,331	0/0:24,0:22:27.82:0,28,357	0/0:17,0:18:10.30:0,10,370	0/0:19,0:18:51.10:0,51,549	0/0:30,0:30:84.22:0,84,934	0/0:20,0:20:48.12:0,48,535	0/0:21,0:21:63.16:0,63,693	0/0:23,0:23:57.15:0,57,635	0/0:13,0:13:33.07:0,33,366	0/0:19,0:19:42.08:0,42,459	0/0:11,0:11:27.06:0,27,301	0/0:18,0:18:48.10:0,48,525	0/0:14,0:14:39.09:0,39,434	1/1:1,8:10:21.07:308,21,0	0/0:32,0:32:81.16:0,81,881	1/1:3,8:11:15.05:222,15,0	0/0:18,0:18:48.12:0,48,535	0/0:18,0:18:42.10:0,42,467	0/0:29,0:29:69.15:0,69,760	0/0:15,0:15:42.08:0,42,454	0/0:10,0:10:24.06:0,24,266	0/0:30,0:30:78.20:0,78,868	0/0:19,0:19:57.14:0,57,626	0/0:24,0:23:57.13:0,57,624	0/0:24,0:24:54.10:0,54,601	0/0:8,0:8:24.06:0,24,267
chr10	98557076	.	TTTTTTTTTTCTTTTTC	T	1126.58	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=4.027;DP=495;FS=3.393;HRun=0;HaplotypeScore=195.4772;InbreedingCoeff=0.8361;MQ=66.31;MQ0=7;MQRankSum=-4.097;QD=20.86;ReadPosRankSum=-1.636;VQSLOD=2.6660;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:19:1.26:1,0,1929	0/0:6,0:6:12.03:0,12,763	0/0:21,0:12:14.93:0,15,523	0/0:22,0:12:17.89:0,18,382	0/0:17,0:17:45.15:0,45,2855	0/0:19,0:19:57.10:0,57,3454	0/0:27,0:27:57.13:0,57,3173	1/1:6,6:12:16.29:371,16,0	0/0:10,0:10:21.05:0,21,1338	0/0:24,0:23:54.17:0,54,3457	0/0:14,0:14:39.13:0,39,2393	0/0:13,0:13:33.10:0,33,2127	0/0:14,0:14:36.59:0,37,2190	0/0:23,0:23:48.12:0,48,2871	0/0:20,0:19:39.13:0,39,2596	0/0:7,0:6:18.06:0,18,1020	0/0:42,0:39:99:0,102,6240	0/0:13,0:13:11.71:0,12,612	0/0:24,0:21:48.13:0,48,2359	0/0:15,0:15:36.11:0,36,2136	0/0:14,0:14:39.13:0,39,2523	0/0:13,0:13:36.12:0,36,2572	0/0:29,0:28:66.96:0,67,3889	0/0:19,0:19:54.17:0,54,3356	0/0:20,0:20:54.07:0,54,2814	1/1:9,6:15:24.04:833,24,0	0/0:15,0:15:42.14:0,42,2508	1/1:7,0:7:7.25:55,7,0
chr10	98557091	.	TC	T	418.21	PASS	AB=0.913;AC=10;AF=0.179;AN=56;BaseQRankSum=8.940;DP=455;FS=0.654;HRun=1;HaplotypeScore=56.2353;InbreedingCoeff=0.3585;MQ=57.89;MQ0=11;MQRankSum=-6.655;QD=4.36;ReadPosRankSum=-2.198;VQSLOD=-0.5242;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:19:27.86:28,0,136	0/0:5,0:5:11.87:0,12,120	0/1:11,2:5:9.23:9,0,58	0/1:17,1:9:25.61:26,0,30	0/0:19,0:18:38.49:0,38,407	0/0:19,0:19:51.06:0,51,558	0/0:21,0:21:59.84:0,60,636	1/1:9,1:10:25.54:220,26,0	0/0:7,0:7:20.89:0,21,226	0/0:19,0:19:55.64:0,56,577	0/0:16,0:16:42.09:0,42,458	0/0:11,0:11:18.71:0,19,241	0/0:13,0:13:36:0,36,375	0/0:18,0:18:41.67:0,42,432	0/0:23,0:21:48:0,48,489	0/1:8,0:7:12.72:13,0,91	0/0:37,0:35:95.97:0,96,1045	0/1:12,0:12:20.37:28,0,20	0/0:18,1:15:38.42:0,38,348	0/0:15,0:15:33.91:0,34,375	0/0:15,0:15:42:0,42,422	0/0:16,0:16:30.93:0,31,434	0/0:27,0:26:66.31:0,66,666	0/0:21,0:21:55.58:0,56,606	0/0:20,0:18:45.97:0,46,542	1/1:7,4:10:26.75:189,27,0	0/0:18,0:17:49.22:0,49,494	0/1:2,2:3:0.34:60,0,0
chr10	98558124	.	AT	A	2017.66	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.264;DP=504;FS=1.611;HRun=6;HaplotypeScore=46.9639;InbreedingCoeff=0.9908;MQ=86.24;MQ0=0;MQRankSum=-5.195;QD=27.27;ReadPosRankSum=5.336;VQSLOD=3.5221;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,42:43:99:1258,117,0	0/0:9,0:9:27.09:0,27,355	0/0:16,0:16:47.97:0,48,563	0/0:17,0:17:45.02:0,45,533	0/0:16,0:16:48.13:0,48,600	0/0:20,0:20:54.16:0,54,696	0/0:26,0:26:75.24:0,75,987	0/0:24,0:24:63.19:0,63,806	0/0:23,0:23:66.21:0,66,869	0/0:16,0:16:42.12:0,42,529	0/0:16,0:16:45.15:0,45,592	0/0:16,0:16:48.16:0,48,632	0/0:11,0:11:33.11:0,33,434	0/0:15,0:15:39.13:0,39,513	0/0:17,0:17:48.14:0,48,617	1/1:0,13:13:36.09:387,36,0	0/0:29,0:29:81.24:0,81,1048	1/1:1,17:18:48.12:516,48,0	0/0:27,0:27:78.22:0,78,996	0/0:8,0:8:18.04:0,18,222	0/0:25,0:25:75.22:0,75,957	0/0:16,0:16:45.10:0,45,573	0/0:12,0:12:33.11:0,33,434	0/0:15,0:15:45.13:0,45,577	0/0:15,0:15:45.14:0,45,578	0/0:22,0:22:66.21:0,66,856	0/0:14,0:14:36.10:0,36,459	0/0:5,0:5:15.05:0,15,194
chr10	98558440	.	TGTGGGG	T	821.92	PASS	AB=0.923;AC=7;AF=0.130;AN=54;BaseQRankSum=5.024;DP=199;FS=2.241;HRun=0;HaplotypeScore=42.3820;InbreedingCoeff=0.5019;MQ=75.59;MQ0=1;MQRankSum=-5.592;QD=15.81;ReadPosRankSum=0.582;VQSLOD=2.2702;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,11:20:21.07:443,21,0	0/0:4,0:4:12.04:0,12,370	0/0:10,0:8:9.94:0,10,210	0/1:11,0:10:4.86:5,0,385	0/0:4,0:4:9.03:0,9,247	0/0:5,0:5:6.02:0,6,199	0/0:12,0:12:24:0,24,624	0/0:8,0:8:12.03:0,12,302	0/0:6,0:6:12.04:0,12,398	0/0:3,0:3:6.01:0,6,127	0/0:6,0:6:9.03:0,9,258	0/0:10,0:10:24.08:0,24,721	0/0:4,0:4:6.02:0,6,198	0/0:7,0:7:12.04:0,12,396	0/0:2,0:2:3.01:0,3,100	1/1:1,7:8:15.05:316,15,0	0/0:7,0:7:15.05:0,15,496	1/1:5,7:12:9.03:190,9,0	0/0:5,0:5:9.03:0,9,194	0/0:3,0:3:3.01:0,3,99	0/0:15,0:15:24.08:0,24,783	0/0:7,0:7:6.02:0,6,199	0/0:6,0:6:6.02:0,6,187	./.	0/0:3,0:3:6.02:0,6,198	0/0:8,0:8:15.04:0,15,370	0/0:6,0:6:9.03:0,9,247	0/0:2,0:2:3.01:0,3,100
chr10	98559550	.	G	GA	1180.79	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-1.511;DP=440;FS=0.000;HRun=0;HaplotypeScore=56.7471;InbreedingCoeff=0.9451;MQ=77.39;MQ0=1;MQRankSum=-0.117;QD=14.95;ReadPosRankSum=-1.273;VQSLOD=4.5324;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,4:23:20.78:216,21,0	0/0:6,0:6:14.88:0,15,142	0/0:15,0:15:37.82:0,38,383	0/0:18,0:18:22.44:0,22,375	0/0:14,0:14:29.90:0,30,297	0/0:15,0:15:35.78:0,36,375	0/0:31,0:31:74.24:0,74,913	1/1:3,12:17:39.42:368,39,0	0/0:22,0:22:65.73:0,66,694	0/0:15,0:15:26.91:0,27,250	0/0:9,0:9:17.92:0,18,158	0/0:13,0:13:36.04:0,36,392	0/0:12,0:12:14.85:0,15,104	0/0:16,0:16:45.07:0,45,514	0/0:14,0:14:33.08:0,33,417	0/0:1,0:10:0:0,0,0	0/0:22,0:22:62.96:0,63,733	1/1:2,3:16:26.97:265,27,0	0/0:20,0:20:56.88:0,57,584	0/0:16,0:16:32.21:0,32,351	0/0:25,0:24:68.94:0,69,751	0/0:8,0:8:14.26:0,14,171	0/0:17,0:17:26.75:0,27,279	0/0:18,0:18:50.95:0,51,584	0/0:13,0:13:35.98:0,36,397	1/1:4,11:15:30.85:270,31,0	0/0:12,0:12:33.05:0,33,387	1/1:1,6:8:18.06:234,18,0
chr10	98559964	.	T	TACAC	2834.81	PASS	AB=0.579;AC=5;AF=0.089;AN=56;BaseQRankSum=-3.506;DP=770;FS=22.039;HRun=0;HaplotypeScore=176.6457;InbreedingCoeff=0.7232;MQ=64.49;MQ0=1;MQRankSum=-1.493;QD=31.85;ReadPosRankSum=1.617;VQSLOD=1.9037;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,32:38:44.88:1075,45,0	0/0:15,0:15:19.73:0,20,254	0/0:22,0:18:6.26:0,6,426	0/0:34,0:26:15.02:0,15,565	0/0:33,0:34:38.84:0,39,576	0/0:20,0:20:36.11:0,36,575	0/0:32,0:32:36.28:0,36,868	0/0:35,0:36:66.18:0,66,992	0/0:35,0:36:93.27:0,93,1480	0/0:25,0:25:62.37:0,62,956	0/0:20,0:20:20.84:0,21,329	0/0:30,0:30:75.19:0,75,1140	0/0:29,0:29:72.14:0,72,1131	0/0:27,0:28:75.17:0,75,1115	0/0:27,0:27:75.20:0,75,1180	1/1:16,22:40:63.19:1420,63,0	0/0:12,0:13:39.11:0,39,612	0/1:3,7:11:25.56:469,0,26	0/0:21,0:21:36.05:0,36,522	0/0:28,0:28:30.10:0,30,491	0/0:40,0:41:80.82:0,81,1412	0/0:24,0:24:39.51:0,40,586	0/0:32,0:32:41.85:0,42,585	0/0:44,0:45:99:0,99,1597	0/0:16,0:16:15:0,15,254	0/0:37,0:37:86.62:0,87,1407	0/0:23,0:22:45.11:0,45,736	0/0:11,0:11:11.40:0,11,150
chr10	98560024	.	AGAGAGAGAGTGTGT	A	1232.63	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.407;DP=720;FS=28.481;HRun=0;HaplotypeScore=265.7987;InbreedingCoeff=0.9799;MQ=58.07;MQ0=18;MQRankSum=-3.641;QD=20.21;ReadPosRankSum=-2.478;VQSLOD=0.9188;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,2:27:21.51:454,22,0	0/0:13,0:12:30.75:0,31,1182	0/0:20,0:11:27.09:0,27,824	0/0:36,0:13:25.88:0,26,495	0/0:29,0:28:47.06:0,47,2656	0/0:24,0:23:45.62:0,46,2028	0/0:26,0:26:75.26:0,75,3100	0/0:32,0:32:92.11:0,92,2502	0/0:32,0:31:87.28:0,87,4533	0/0:28,0:28:81.15:0,81,3734	0/0:22,0:22:51.18:0,51,2393	0/0:21,0:21:45.61:0,46,2238	0/0:23,0:23:63.22:0,63,3147	0/0:27,0:26:57.20:0,57,3347	0/0:23,0:23:60.21:0,60,3417	1/1:25,0:25:15.31:360,15,0	0/0:15,0:15:45.12:0,45,1844	1/1:5,3:8:21.06:558,21,0	0/0:15,0:15:45.15:0,45,1316	0/0:29,0:29:81.28:0,81,3673	0/0:58,0:57:99:0,151,6737	0/0:30,0:30:63.20:0,63,3210	0/0:24,0:24:57.18:0,57,3063	0/0:39,0:39:96.09:0,96,4547	0/0:15,0:15:42.14:0,42,2313	0/0:32,0:31:86.42:0,86,3733	0/0:37,0:34:88.77:0,89,3415	0/0:9,0:8:12.04:0,12,383
chr10	98560026	.	AGAGAGAGTGTGT	A	1399.45	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.400;DP=709;FS=28.265;HRun=0;HaplotypeScore=240.2094;InbreedingCoeff=0.9813;MQ=58.66;MQ0=17;MQRankSum=-3.704;QD=26.40;ReadPosRankSum=-1.898;VQSLOD=1.0659;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:24.97:547,25,0	0/0:13,0:12:30.35:0,30,1051	0/0:20,0:11:33.11:0,33,1032	0/0:35,0:14:29.15:0,29,530	0/0:29,0:28:47.03:0,47,2284	0/0:24,0:23:45.62:0,46,1804	0/0:26,0:26:75.24:0,75,2723	0/0:33,0:33:88.54:0,89,2239	0/0:32,0:31:84.29:0,84,3888	0/0:27,0:27:75.15:0,75,3209	0/0:22,0:22:51.18:0,51,2089	0/0:20,0:20:42.62:0,43,1949	0/0:23,0:23:63.19:0,63,2698	0/0:27,0:26:57.18:0,57,2921	0/0:24,0:24:60.19:0,60,3006	1/1:4,21:25:15.31:554,15,0	0/0:13,0:13:39.13:0,39,1586	1/1:8,0:8:21.52:438,22,0	0/0:15,0:15:45.15:0,45,1134	0/0:30,0:30:84.27:0,84,3241	0/0:59,0:58:99:0,156,6002	0/0:30,0:30:63.22:0,63,2892	0/0:23,0:23:57.20:0,57,2740	0/0:39,0:39:96:0,96,3901	0/0:16,0:16:45.15:0,45,2138	0/0:32,0:31:86.06:0,86,3266	0/0:36,0:33:85.62:0,86,2922	0/0:8,0:7:12.04:0,12,330
chr10	98560032	.	AGTGTGT	A	1041.73	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.448;DP=714;FS=22.644;HRun=0;HaplotypeScore=177.0245;InbreedingCoeff=0.9797;MQ=63.75;MQ0=13;MQRankSum=-3.705;QD=20.43;ReadPosRankSum=-0.919;VQSLOD=1.7636;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,2:20:24.97:547,25,0	0/0:10,0:9:24.05:0,24,621	0/0:20,0:14:42.14:0,42,1272	0/0:28,0:16:37.92:0,38,831	0/0:25,0:24:47.19:0,47,1437	0/0:23,0:22:40.08:0,40,1103	0/0:26,0:26:72.20:0,72,1788	0/0:37,0:37:90.74:0,91,2256	0/0:29,0:29:75.23:0,75,2023	0/0:31,0:31:87.68:0,88,2368	0/0:22,0:22:54.15:0,54,1390	0/0:25,0:25:56.96:0,57,1531	0/0:21,0:21:51.18:0,51,1480	0/0:28,0:27:57.20:0,57,1756	0/0:24,0:24:57.18:0,57,1785	1/1:21,2:23:15.52:271,16,0	0/0:15,0:15:42.14:0,42,1151	1/1:7,1:8:18.06:363,18,0	0/0:13,0:13:36.12:0,36,922	0/0:32,0:32:81.28:0,81,2123	0/0:59,0:58:99:0,147,3826	0/0:35,0:35:72.23:0,72,1958	0/0:26,0:26:66.23:0,66,1955	0/0:42,0:42:87.26:0,87,2267	0/0:18,0:18:51.18:0,51,1490	0/0:33,0:32:83.78:0,84,2160	0/0:33,0:30:76.72:0,77,1703	0/0:8,0:7:12.04:0,12,287
chr10	98560270	.	AT	A	2148.40	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=2.370;DP=368;FS=2.212;HRun=1;HaplotypeScore=375.5657;InbreedingCoeff=0.5072;MQ=34.20;MQ0=0;MQRankSum=-1.418;QD=5.87;ReadPosRankSum=1.855;VQSLOD=0.2235;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:17:24.99:75,25,0	1/1:0,7:7:15:47,15,0	0/0:2,0:2:3.01:0,3,49	./.	1/1:0,16:16:20.29:53,20,0	1/1:0,19:19:39.52:119,40,0	1/1:0,19:19:36.45:107,36,0	1/1:0,13:13:36.81:182,37,0	1/1:0,23:23:42.33:125,42,0	1/1:0,15:15:38.93:185,39,0	1/1:0,20:19:26.78:68,27,0	1/1:0,17:17:31.63:99,32,0	1/1:1,16:17:30.51:91,31,0	1/1:0,17:17:32.37:95,32,0	1/1:0,18:18:32.93:95,33,0	1/1:0,10:10:19.31:60,19,0	1/1:0,13:13:17.75:56,18,0	1/1:1,3:4:0.18:18,0,0	1/1:0,7:7:19.97:102,20,0	1/1:0,15:15:24.22:66,24,0	1/1:0,4:4:7.93:23,8,0	1/1:0,12:12:20.66:59,21,0	1/1:0,15:15:14.68:41,15,0	1/1:0,12:12:12.66:32,13,0	1/1:0,14:13:24.99:75,25,0	1/1:0,15:15:40.84:177,41,0	1/1:0,21:21:45.69:155,46,0	1/1:0,5:5:11.89:41,12,0
chr10	98560274	.	A	AG	6849.72	PASS	AC=52;AF=1.000;AN=52;DP=462;FS=0.000;HRun=0;HaplotypeScore=453.4936;InbreedingCoeff=-0.0023;MQ=28.72;MQ0=0;QD=14.83;VQSLOD=2.4986;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:21:40.47:221,40,0	1/1:2,7:9:23.17:129,23,0	./.	./.	1/1:6,16:22:44.16:208,44,0	1/1:2,19:21:60.63:343,61,0	1/1:4,19:23:57.53:304,58,0	1/1:12,13:25:74.86:711,75,0	1/1:4,23:27:69.03:368,69,0	1/1:4,15:19:53.77:488,54,0	1/1:2,20:21:55.59:257,56,0	1/1:2,17:19:54.30:295,54,0	1/1:2,17:19:51.77:301,52,0	1/1:2,17:19:51.51:271,52,0	1/1:4,18:22:51.55:267,52,0	1/1:3,10:13:35.01:244,35,0	1/1:0,13:13:25.82:141,26,0	1/1:3,3:6:16.36:127,16,0	1/1:2,7:9:23.94:197,24,0	1/1:6,15:21:45.45:228,45,0	1/1:4,4:8:11.47:59,11,0	1/1:7,12:19:37.24:195,37,0	1/1:4,15:19:43.13:202,43,0	1/1:1,12:13:25.06:118,25,0	1/1:5,14:16:46.45:263,46,0	1/1:5,15:20:53.60:421,54,0	1/1:5,21:26:63.77:369,64,0	1/1:2,5:7:17.64:123,18,0
chr10	98560306	.	GGA	G	8131.06	PASS	AB=0.970;AC=53;AF=0.946;AN=56;BaseQRankSum=-1.791;DP=521;FS=43.577;HRun=0;HaplotypeScore=364.4367;InbreedingCoeff=-0.0587;MQ=58.19;MQ0=0;MQRankSum=-0.366;QD=15.61;ReadPosRankSum=4.424;VQSLOD=3.7460;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:40.89:258,41,0	1/1:12,0:12:32.40:214,32,0	1/1:8,3:11:27.83:335,28,0	0/1:9,1:10:30.39:150,0,30	1/1:24,0:24:54.84:307,55,0	1/1:18,0:18:52.87:351,53,0	0/1:22,0:22:31.98:253,0,32	1/1:26,0:26:53.28:431,53,0	1/1:25,0:25:34.26:387,34,0	1/1:28,1:29:77.34:607,77,0	1/1:23,0:22:52.92:373,53,0	1/1:20,0:20:37.73:316,38,0	1/1:22,0:22:37.69:303,38,0	1/1:21,0:21:43.32:344,43,0	1/1:14,0:14:35.38:220,35,0	1/1:17,0:17:38.36:260,38,0	1/1:11,0:11:11.40:161,11,0	0/1:5,0:5:25.57:26,0,26	1/1:9,0:9:20.69:135,21,0	1/1:26,0:26:59.83:389,60,0	1/1:12,0:12:17.83:148,18,0	1/1:27,0:27:73.35:505,73,0	1/1:18,0:18:40.88:251,41,0	1/1:17,0:17:11.32:160,11,0	1/1:24,0:21:55.46:375,55,0	1/1:21,0:21:37.97:320,38,0	1/1:27,0:27:52.54:432,53,0	1/1:6,0:6:17.81:119,18,0
chr10	98560546	.	CT	C	11276.62	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.526;DP=450;FS=0.000;HRun=2;HaplotypeScore=109.1454;InbreedingCoeff=0.8400;MQ=55.73;MQ0=9;MQRankSum=1.861;QD=29.21;ReadPosRankSum=2.115;VQSLOD=4.4720;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:66.21:855,66,0	1/1:0,6:6:12.04:153,12,0	0/0:31,1:10:18.01:0,18,240	0/0:32,0:5:2.54:0,3,11	1/1:0,14:14:18.51:234,19,0	1/1:0,16:15:39.13:505,39,0	1/1:0,14:14:30.10:389,30,0	1/1:0,15:15:36.12:466,36,0	1/1:0,18:17:39.13:504,39,0	1/1:0,14:14:39.11:490,39,0	1/1:0,20:20:33.09:412,33,0	1/1:0,19:19:51.16:649,51,0	1/1:0,9:9:27.09:349,27,0	1/1:1,8:9:21.07:272,21,0	1/1:0,17:16:33.11:427,33,0	1/1:0,15:14:39.13:506,39,0	1/1:0,20:20:57.19:739,57,0	1/1:0,5:5:15.05:194,15,0	1/1:0,10:10:30.05:370,30,0	1/1:0,17:17:30.01:349,30,0	1/1:2,19:21:41.35:513,41,0	1/1:1,7:7:11.53:122,12,0	1/1:0,13:13:24.08:312,24,0	1/1:0,18:18:48.16:623,48,0	1/1:0,18:18:30.10:388,30,0	1/1:3,13:15:42.12:525,42,0	1/1:0,19:19:54.18:699,54,0	1/1:0,6:6:18.06:233,18,0
chr10	98561658	.	T	TG	1930.81	PASS	AB=0.545;AC=5;AF=0.089;AN=56;BaseQRankSum=-7.163;DP=455;FS=0.000;HRun=1;HaplotypeScore=48.7493;InbreedingCoeff=0.7636;MQ=78.01;MQ0=0;MQRankSum=-1.455;QD=31.65;ReadPosRankSum=3.883;VQSLOD=3.1982;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:87.29:1298,87,0	0/0:7,0:7:21.05:0,21,257	0/0:19,0:18:47.57:0,48,507	0/0:20,0:19:6.33:0,6,344	0/0:22,0:22:63.18:0,63,789	0/0:8,0:8:24.08:0,24,311	0/0:15,0:15:45.14:0,45,569	0/0:19,0:18:54.14:0,54,649	0/0:19,0:19:48.14:0,48,607	0/0:23,0:23:66.20:0,66,834	0/0:17,0:17:45:0,45,540	0/0:15,0:15:39.13:0,39,505	0/0:13,0:13:39.11:0,39,490	0/0:17,0:17:51.14:0,51,633	0/0:19,0:19:54.15:0,54,671	0/1:2,10:12:8.80:366,0,9	0/0:12,0:12:36.09:0,36,430	1/1:0,11:11:27.09:396,27,0	0/0:16,0:16:45.11:0,45,541	0/0:11,0:11:26.74:0,27,305	0/0:27,0:27:75.15:0,75,883	0/0:15,0:15:45.13:0,45,557	0/0:12,0:12:36.12:0,36,466	0/0:14,0:14:39.10:0,39,467	0/0:17,0:17:51.13:0,51,618	0/0:22,0:22:66.17:0,66,813	0/0:11,0:11:30.10:0,30,388	0/0:4,0:4:12.04:0,12,155
chr10	98562595	.	G	GCCT	4018.42	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.221;DP=687;FS=10.612;HRun=0;HaplotypeScore=92.6809;InbreedingCoeff=0.9984;MQ=82.60;MQ0=0;MQRankSum=-3.097;QD=47.84;ReadPosRankSum=3.834;VQSLOD=5.5828;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,36:46:99:2099,101,0	0/0:8,0:8:21.06:0,21,301	0/0:28,0:28:59.86:0,60,964	0/0:17,0:17:36.12:0,36,542	0/0:27,0:27:78.24:0,78,1153	0/0:24,0:24:57.18:0,57,850	0/0:21,0:21:48.15:0,48,714	0/0:20,0:20:51.17:0,51,781	0/0:34,0:34:96.31:0,96,1451	0/0:28,0:28:75.25:0,75,1131	0/0:33,0:33:87.30:0,87,1332	0/0:23,0:23:66.22:0,66,1012	0/0:19,0:19:51.17:0,51,782	0/0:19,0:19:45.15:0,45,690	0/0:18,0:18:51.16:0,51,762	1/1:3,21:24:51.18:1087,51,0	0/0:21,0:21:51.17:0,51,780	1/1:0,13:14:39.13:832,39,0	0/0:28,0:28:72.22:0,72,1047	0/0:29,0:29:75.23:0,75,1107	0/0:47,0:47:99:0,123,1863	0/0:28,0:28:78.26:0,78,1196	0/0:21,0:21:54.17:0,54,807	0/0:30,0:30:75.25:0,75,1149	0/0:18,0:18:51.15:0,51,759	0/0:30,0:30:81.26:0,81,1222	0/0:15,0:15:39.13:0,39,596	0/0:17,0:17:45.15:0,45,690
chr10	98563160	.	CTG	C	2008.97	PASS	AB=0.941;AC=30;AF=0.577;AN=52;BaseQRankSum=-4.608;DP=542;FS=13.542;HRun=0;HaplotypeScore=95.5181;InbreedingCoeff=0.4317;MQ=45.28;MQ0=30;MQRankSum=5.855;QD=5.02;ReadPosRankSum=0.216;VQSLOD=1.7473;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:8.46:0,8,89	1/1:6,0:5:5.98:49,6,0	./.	./.	1/1:21,0:19:5.93:144,6,0	1/1:35,0:31:23.88:189,24,0	1/1:13,0:12:5.59:46,6,0	0/0:23,0:21:18.65:0,19,118	0/1:20,0:18:0.47:120,0,0	1/1:21,6:25:14.91:122,15,0	0/1:21,0:18:0.02:142,0,0	0/1:13,0:13:9.07:75,0,9	0/1:19,0:18:18.60:19,0,68	1/1:16,0:14:18.74:161,19,0	1/1:18,0:16:22.91:182,23,0	0/0:24,0:23:32.76:0,33,246	0/0:19,0:16:14.80:0,15,99	0/0:10,0:10:14.80:0,15,97	0/1:19,0:19:12.04:60,0,12	0/1:13,11:21:11.69:12,0,19	0/1:34,0:31:78.84:79,0,111	0/1:17,4:19:0:0,0,0	1/1:23,0:22:8.90:150,9,0	1/1:25,0:24:32.64:251,33,0	1/1:24,0:22:35.91:293,36,0	0/0:24,0:22:29.57:0,30,204	1/1:20,0:19:11.96:94,12,0	0/0:14,0:12:20.94:0,21,192
chr10	98565113	.	T	TA	55.24	PASS	AB=0.955;AC=5;AF=0.100;AN=50;BaseQRankSum=-0.191;DP=562;FS=12.171;HRun=0;HaplotypeScore=37.0197;InbreedingCoeff=0.5700;MQ=30.41;MQ0=78;MQRankSum=-1.125;QD=1.78;ReadPosRankSum=-1.033;VQSLOD=0.0921;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,3:3:3.01:48,3,0	0/0:12,0:10:23.99:0,24,291	./.	./.	0/0:25,0:18:42.07:0,42,561	0/0:24,0:23:33.11:0,33,460	0/0:18,0:12:5.55:0,6,83	0/0:34,1:9:24.08:0,24,334	0/0:21,0:21:36.12:0,36,503	0/0:25,0:17:51.17:0,51,713	0/0:24,0:22:48.12:0,48,647	0/0:25,0:22:36.09:0,36,481	0/0:19,0:19:30.10:0,30,418	0/0:22,0:20:27.09:0,27,377	0/0:16,0:15:21.07:0,21,293	./.	0/0:19,0:20:11.16:0,11,397	1/1:2,4:3:6.02:96,6,0	0/1:20,1:10:17.77:18,0,347	0/0:32,0:21:42.14:0,42,586	0/0:22,0:21:30.10:0,30,419	0/0:23,0:18:21.07:0,21,293	0/0:15,0:12:15.05:0,15,209	0/0:17,0:16:33.11:0,33,461	0/0:28,0:20:36.12:0,36,502	0/0:20,0:16:48.12:0,48,633	0/0:27,0:21:39.05:0,39,544	0/0:20,0:18:48.12:0,48,647
chr10	98567660	.	TA	T	1048.55	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=5.869;DP=224;FS=0.875;HRun=8;HaplotypeScore=32.8543;InbreedingCoeff=0.7059;MQ=73.24;MQ0=5;MQRankSum=-0.019;QD=21.40;ReadPosRankSum=3.665;VQSLOD=3.0391;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,12:12:33.05:319,33,0	0/0:2,0:2:6.02:0,6,70	0/0:31,0:7:14.89:0,15,122	0/0:34,1:16:1.67:0,2,164	1/1:0,5:5:15.02:145,15,0	1/1:0,12:12:33.05:319,33,0	1/1:0,2:2:6.01:58,6,0	0/0:15,0:15:27.08:0,27,326	1/1:0,2:2:6.01:58,6,0	0/0:10,0:10:30.09:0,30,362	0/0:9,0:8:21.06:0,21,251	0/0:5,0:4:9.03:0,9,109	0/0:5,0:5:12.04:0,12,145	0/0:4,0:4:12.04:0,12,145	0/0:3,0:3:9.03:0,9,109	0/0:4,0:4:9.03:0,9,109	0/0:13,0:12:36.04:0,36,400	1/1:1,14:15:3.53:312,4,0	0/0:10,0:10:30.09:0,30,362	0/0:2,0:2:6.02:0,6,72	0/0:2,0:2:0:0,0,0	0/0:2,0:2:3.01:0,3,36	0/0:2,0:2:6.02:0,6,72	./.	0/0:6,0:6:15.05:0,15,181	0/0:5,0:4:12.04:0,12,145	0/0:5,0:5:15:0,15,161	0/0:4,0:4:12.04:0,12,145
chr10	98568019	.	AT	A	389.50	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.615;DP=269;FS=0.000;HRun=7;HaplotypeScore=91.1354;InbreedingCoeff=0.7088;MQ=54.30;MQ0=3;MQRankSum=-2.786;QD=20.50;ReadPosRankSum=-0.511;VQSLOD=2.7481;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:39.04:383,39,0	0/0:6,0:6:17.99:0,18,203	0/0:4,0:2:2.60:0,3,10	0/0:3,0:3:2.90:0,3,16	0/0:13,0:13:32.93:0,33,366	0/0:8,0:8:20.94:0,21,222	0/0:6,0:5:14.96:0,15,151	0/0:16,0:16:29.50:0,29,94	0/0:11,0:11:29.96:0,30,333	0/0:10,0:10:30.09:0,30,371	0/0:2,0:2:3.01:0,3,37	0/0:7,0:7:21.07:0,21,259	0/0:12,0:12:36.11:0,36,443	0/0:11,0:11:30.03:0,30,351	0/0:5,0:5:15.05:0,15,185	0/0:6,0:6:15.44:0,15,65	0/0:15,0:15:41.98:0,42,466	1/1:0,4:4:12.02:121,12,0	0/0:10,0:9:27.03:0,27,316	0/0:16,0:15:35.98:0,36,406	0/0:2,0:2:5.98:0,6,57	0/0:12,0:12:33.10:0,33,408	0/0:11,0:11:29.91:0,30,315	0/0:10,0:10:23.62:0,24,252	0/0:13,0:13:39.04:0,39,451	0/0:16,0:17:22.56:0,23,140	0/0:18,0:16:38.82:0,39,446	0/0:6,0:6:13.61:0,14,62
chr10	98568311	.	A	AGT	827.65	PASS	AB=0.848;AC=10;AF=0.192;AN=52;BaseQRankSum=0.534;DP=558;FS=2.574;HRun=0;HaplotypeScore=91.3540;InbreedingCoeff=0.5329;MQ=57.15;MQ0=3;MQRankSum=-3.059;QD=5.67;ReadPosRankSum=-3.496;VQSLOD=2.2717;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,11:30:1:78,1,0	0/0:9,0:9:2.90:0,3,33	./.	./.	0/0:15,0:16:9.22:0,9,89	0/0:12,0:12:4.05:0,4,108	0/0:21,0:21:3.60:0,4,208	1/1:32,0:32:20:157,20,0	0/1:17,0:20:4.89:5,0,51	0/0:22,0:21:11.85:0,12,102	0/0:13,0:14:11.50:0,12,87	0/0:18,0:18:11.84:0,12,103	0/0:20,0:20:15.98:0,16,196	0/0:18,0:18:11.99:0,12,112	0/0:15,0:15:9.02:0,9,98	0/0:17,0:17:21.03:0,21,285	0/0:23,0:25:10.72:0,11,208	0/1:13,10:22:7.66:289,0,8	0/0:28,0:28:9.87:0,10,85	0/0:23,0:25:23.86:0,24,224	0/0:22,0:24:23.89:0,24,241	0/0:21,0:21:3.01:0,3,33	0/0:16,0:18:8.79:0,9,64	0/0:18,0:19:26.69:0,27,244	0/0:14,0:19:20.72:0,21,191	1/1:29,0:30:35.94:318,36,0	0/0:18,0:18:14.99:0,15,150	1/1:7,0:10:14.99:128,15,0
chr10	98568533	.	GCCCCGTT	G	3566.86	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=10.760;DP=619;FS=4.419;HRun=0;HaplotypeScore=149.9772;InbreedingCoeff=0.9968;MQ=92.53;MQ0=0;MQRankSum=-10.744;QD=54.04;ReadPosRankSum=1.959;VQSLOD=3.3426;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,38:41:75.26:1915,75,0	0/0:10,0:10:30.09:0,30,1043	0/0:22,0:22:60.18:0,60,2268	0/0:34,0:34:78.27:0,78,3300	0/0:16,0:16:48.16:0,48,1879	0/0:19,0:19:57.20:0,57,2170	0/0:29,0:29:87.30:0,87,3295	0/0:30,0:30:75.26:0,75,2649	0/0:32,0:32:93.32:0,93,3541	0/0:19,0:19:57.20:0,57,2086	0/0:7,0:7:21.07:0,21,838	0/0:25,0:25:75.26:0,75,2983	0/0:29,0:29:87.30:0,87,3370	0/0:27,0:27:75.26:0,75,2958	0/0:21,0:20:63.21:0,63,2424	1/1:0,17:17:42.14:1098,42,0	0/0:41,0:41:99:0,120,4692	1/1:1,7:8:21.07:554,21,0	0/0:17,0:17:51.18:0,51,2045	0/0:25,0:25:72.20:0,72,2490	0/0:31,0:31:90.31:0,90,3478	0/0:22,0:22:66.23:0,66,2548	0/0:13,0:13:36.59:0,37,1384	0/0:30,0:30:87.30:0,87,3344	0/0:17,0:17:51.18:0,51,1903	0/0:15,0:15:45.15:0,45,1735	0/0:22,0:22:60.16:0,60,2135	./.
chr10	98569454	.	GA	G	269.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.055;DP=695;FS=4.979;HRun=10;HaplotypeScore=67.9874;InbreedingCoeff=0.9459;MQ=70.69;MQ0=0;MQRankSum=-0.759;QD=15.87;ReadPosRankSum=-0.805;VQSLOD=3.8524;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1183	0/0:12,1:13:10.03:0,10,331	0/0:21,0:18:24.88:0,25,307	0/0:15,0:15:22.20:0,22,366	0/0:28,1:30:61.03:0,61,884	0/0:25,0:26:72:0,72,761	0/0:39,0:39:99:0,102,1120	0/0:29,1:30:61.13:0,61,880	0/0:25,0:25:72.17:0,72,778	0/0:36,0:36:99:0,99,1095	0/0:23,0:23:31.15:0,31,564	0/0:20,0:20:51.08:0,51,543	0/0:21,0:21:32.24:0,32,542	0/0:19,1:20:31.10:0,31,571	0/0:20,0:21:53.97:0,54,571	1/1:0,17:17:41.99:365,42,0	0/0:33,0:33:96.25:0,96,1054	0/0:23,0:23:50.15:0,50,709	0/0:23,0:23:62.66:0,63,672	0/0:30,1:31:52.14:0,52,794	0/0:25,0:25:66.12:0,66,701	0/0:28,0:28:66.16:0,66,715	0/0:25,1:26:52.15:0,52,802	0/0:21,0:21:54.15:0,54,596	0/0:19,0:21:56.98:0,57,605	0/0:34,0:34:78.19:0,78,846	0/0:27,1:28:37.11:0,37,638	0/0:7,0:7:21.06:0,21,232
chr10	98569933	.	AAAG	A	1656.67	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.472;DP=605;FS=3.176;HRun=0;HaplotypeScore=97.0329;InbreedingCoeff=0.9705;MQ=62.47;MQ0=7;MQRankSum=-5.958;QD=24.73;ReadPosRankSum=-0.196;VQSLOD=3.4876;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:32:43.74:680,44,0	0/0:6,0:6:18.04:0,18,293	0/0:33,0:11:8.16:0,8,206	0/0:37,0:19:29.46:0,29,367	0/0:18,0:18:51.12:0,51,902	0/0:26,0:26:72.23:0,72,1454	0/0:29,0:29:75.26:0,75,1496	0/0:27,0:27:74.51:0,75,1280	0/0:23,0:23:63.19:0,63,1177	0/0:22,0:22:51.16:0,51,973	0/0:11,0:10:27.08:0,27,505	0/0:13,0:13:39.13:0,39,783	0/0:15,0:15:33.09:0,33,609	0/0:24,0:24:72.19:0,72,1375	0/0:22,0:22:60.21:0,60,1227	1/1:6,12:18:51.17:737,51,0	0/0:29,0:29:69.17:0,69,1353	1/1:16,0:16:38.90:382,39,0	0/0:28,0:26:66.21:0,66,1214	0/0:20,0:20:42.13:0,42,810	0/0:10,0:10:27.09:0,27,537	0/0:12,0:12:21.04:0,21,375	0/0:17,0:17:48.12:0,48,914	0/0:28,0:28:75.22:0,75,1473	0/0:20,0:20:57.16:0,57,1089	0/0:26,0:26:78.25:0,78,1546	0/0:21,0:21:45.15:0,45,910	0/0:21,0:21:48.13:0,48,899
chr10	98569943	.	AAGAAAAG	A	2691.36	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.751;DP=614;FS=7.844;HRun=0;HaplotypeScore=142.5375;InbreedingCoeff=0.9928;MQ=64.81;MQ0=5;MQRankSum=-9.545;QD=56.07;ReadPosRankSum=-1.373;VQSLOD=2.8606;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,23:31:48.55:1931,49,0	0/0:7,0:7:21.06:0,21,668	0/0:39,0:16:33.67:0,34,688	0/0:34,0:16:24.27:0,24,716	0/0:17,0:17:51.16:0,51,1778	0/0:27,0:27:81.28:0,81,3115	0/0:31,0:31:90.31:0,90,3149	0/0:31,0:31:93.28:0,93,3065	0/0:21,0:21:63.20:0,63,2303	0/0:23,0:23:60.21:0,60,2167	0/0:10,0:10:30.09:0,30,932	0/0:14,0:14:42.14:0,42,1500	0/0:13,0:13:36.12:0,36,1382	0/0:28,0:28:84.27:0,84,2913	0/0:20,0:20:60.21:0,60,2225	0/0:21,0:21:19.73:0,20,771	0/0:30,0:30:87.30:0,87,3029	1/1:6,10:16:42.10:882,42,0	0/0:30,0:29:84.28:0,84,2436	0/0:14,0:14:42.13:0,42,1458	0/0:11,0:11:30.10:0,30,1007	0/0:9,0:9:26.96:0,27,922	0/0:17,0:17:48.14:0,48,1759	0/0:29,0:29:87.28:0,87,2918	0/0:26,0:26:75.25:0,75,2576	0/0:29,0:29:87.30:0,87,3191	0/0:17,0:17:51.18:0,51,1912	0/0:18,0:18:51.18:0,51,1994
chr10	98569946	.	AAAAG	A	1307.39	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.831;DP=605;FS=4.978;HRun=0;HaplotypeScore=111.9566;InbreedingCoeff=0.9798;MQ=66.16;MQ0=4;MQRankSum=-8.235;QD=29.05;ReadPosRankSum=-1.163;VQSLOD=3.2462;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,3:30:78.11:1034,78,0	0/0:6,0:6:18.06:0,18,418	0/0:37,0:17:15.82:0,16,494	0/0:36,0:18:16.39:0,16,500	0/0:16,0:16:42.14:0,42,1045	0/0:27,0:27:78.27:0,78,1989	0/0:30,0:30:81.26:0,81,1917	0/0:31,0:31:84.28:0,84,2043	0/0:20,0:20:57.17:0,57,1366	0/0:22,0:22:54.18:0,54,1334	0/0:9,0:9:24.06:0,24,512	0/0:14,0:14:33.11:0,33,838	0/0:13,0:13:39.13:0,39,995	0/0:28,0:28:81.27:0,81,1841	0/0:21,0:21:57.16:0,57,1284	0/0:21,0:21:60.15:0,60,775	0/0:29,0:29:81.23:0,81,1864	1/1:13,1:14:30.05:395,30,0	0/0:30,0:29:63.20:0,63,1380	0/0:14,0:14:36.12:0,36,836	0/0:11,0:11:27.09:0,27,630	0/0:9,0:9:22.83:0,23,612	0/0:15,0:15:45.15:0,45,1039	0/0:28,0:28:75.19:0,75,1668	0/0:26,0:26:72.23:0,72,1758	0/0:30,0:30:81.27:0,81,1968	0/0:19,0:19:57.18:0,57,1328	0/0:18,0:18:51.17:0,51,1258
chr10	98569999	.	C	CG	1221.57	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=0.951;DP=583;FS=0.622;HRun=7;HaplotypeScore=71.3184;InbreedingCoeff=0.9952;MQ=79.03;MQ0=0;MQRankSum=-5.048;QD=21.06;ReadPosRankSum=0.535;VQSLOD=3.1163;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:28:47.98:514,48,0	0/0:7,0:7:18.03:0,18,173	0/0:28,0:26:53.23:0,53,506	0/0:32,0:25:47.90:0,48,444	0/0:16,0:16:36:0,36,338	0/0:22,0:22:63.10:0,63,607	0/0:28,0:28:69.10:0,69,666	0/0:27,0:27:51.04:0,51,482	0/0:25,0:25:60.07:0,60,573	0/0:27,0:27:66.09:0,66,637	0/0:9,0:9:21.02:0,21,197	0/0:12,0:12:36.05:0,36,342	0/0:15,0:15:36.05:0,36,347	0/0:19,0:19:51.08:0,51,492	0/0:18,0:18:48.07:0,48,463	1/1:4,13:17:39.10:452,39,0	0/0:27,0:27:78.11:0,78,747	1/1:1,11:12:33.10:399,33,0	0/0:22,0:22:54.05:0,54,513	0/0:18,0:18:45.06:0,45,430	0/0:21,0:21:41.59:0,42,405	0/0:14,0:14:30.04:0,30,290	0/0:14,0:14:39.06:0,39,376	0/0:28,0:28:64.41:0,64,615	0/0:28,0:28:78.12:0,78,753	0/0:25,0:25:54.07:0,54,520	0/0:24,0:24:60.09:0,60,577	0/0:18,0:18:48.07:0,48,463
chr10	98570995	.	C	CA	4171.07	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-14.201;DP=725;FS=0.000;HRun=0;HaplotypeScore=67.7684;InbreedingCoeff=1.0000;MQ=84.03;MQ0=0;MQRankSum=-0.234;QD=44.85;ReadPosRankSum=3.932;VQSLOD=3.8182;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,42:44:99:1918,120,0	0/0:18,0:18:51.17:0,51,712	0/0:21,0:21:60.20:0,60,826	0/0:25,0:25:69.21:0,69,945	0/0:23,0:23:57.19:0,57,796	0/0:22,0:22:66.14:0,66,852	0/0:23,0:23:69.23:0,69,964	0/0:22,0:22:57.19:0,57,797	0/0:26,0:26:78.26:0,78,1090	0/0:41,0:41:99:0,120,1672	0/0:21,0:21:63.04:0,63,852	0/0:23,0:23:69.23:0,69,965	0/0:22,0:22:66.21:0,66,899	0/0:16,0:16:48.15:0,48,653	0/0:33,0:33:99:0,99,1367	1/1:0,32:32:90.31:1439,90,0	0/0:29,0:29:87.29:0,87,1213	1/1:0,17:17:51.17:815,51,0	0/0:19,0:19:57.18:0,57,781	0/0:21,0:21:60.19:0,60,821	0/0:49,0:49:99:0,147,2054	0/0:24,0:24:63.21:0,63,880	0/0:18,0:18:51.17:0,51,710	0/0:39,0:39:99:0,111,1529	0/0:27,0:27:81.25:0,81,1113	0/0:34,0:34:99:0,102,1421	0/0:19,0:18:57.15:0,57,775	0/0:17,0:17:51.13:0,51,649
chr10	98571878	.	G	GTGGA	1447.88	PASS	AB=0.675;AC=4;AF=0.077;AN=52;BaseQRankSum=-5.714;DP=701;FS=2.753;HRun=0;HaplotypeScore=109.8273;InbreedingCoeff=0.4190;MQ=60.78;MQ0=16;MQRankSum=0.389;QD=14.48;ReadPosRankSum=1.238;VQSLOD=3.0618;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,12:39:21.07:490,21,0	0/0:9,0:9:9.03:0,9,138	./.	./.	0/1:10,11:22:12.93:541,0,13	0/0:30,0:30:48.14:0,48,685	0/0:24,0:26:24.06:0,24,321	0/0:29,0:25:5.90:0,6,43	0/0:29,0:29:39.12:0,39,570	0/0:25,0:24:23.57:0,24,329	0/0:24,0:24:39.10:0,39,567	0/0:21,0:21:39.09:0,39,534	0/0:22,0:21:27.09:0,27,410	0/0:18,0:18:21.07:0,21,312	0/0:25,0:24:35.83:0,36,546	0/0:34,0:34:66.19:0,66,961	0/0:35,0:36:54.14:0,54,755	0/1:22,16:38:35.92:530,0,36	0/0:23,0:22:14.44:0,14,163	0/0:26,0:26:39.03:0,39,550	0/0:31,0:29:44.34:0,44,601	0/0:24,0:24:39.09:0,39,545	0/0:20,0:19:30.07:0,30,410	0/0:18,0:18:36.11:0,36,525	0/0:26,0:25:33.07:0,33,458	0/0:29,0:28:39.13:0,39,590	0/0:25,0:25:33.08:0,33,478	0/0:8,0:8:15.05:0,15,229
chr10	98574960	.	G	GTTGTT	2053.91	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.650;DP=643;FS=8.606;HRun=0;HaplotypeScore=118.7834;InbreedingCoeff=0.8574;MQ=66.80;MQ0=4;MQRankSum=-0.435;QD=25.36;ReadPosRankSum=0.586;VQSLOD=2.6363;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:51.16:0,51,901	0/0:5,0:5:9.02:0,9,134	0/0:30,0:19:1.90:0,2,84	0/0:47,0:34:29.94:0,30,430	0/0:22,0:22:33.11:0,33,602	0/0:20,0:20:39.13:0,39,712	0/0:21,0:21:34.62:0,35,661	1/1:31,0:31:9.01:123,9,0	0/0:17,0:17:30.10:0,30,533	0/0:35,0:35:54.18:0,54,947	0/0:17,0:17:42.14:0,42,766	0/0:18,0:18:41.73:0,42,765	0/0:19,0:19:33.09:0,33,544	0/0:17,0:17:33.11:0,33,588	0/0:25,0:25:48.16:0,48,862	0/0:3,0:9:18.05:0,18,210	0/0:32,0:32:75.26:0,75,1368	0/0:23,0:22:23.85:0,24,694	0/0:18,0:16:18.05:0,18,299	0/0:29,0:29:60.21:0,60,1080	0/0:14,0:14:30.09:0,30,504	0/0:18,0:18:39.12:0,39,671	0/0:22,0:21:30.09:0,30,504	0/0:30,0:31:75.24:0,75,1305	0/0:23,0:23:45.10:0,45,786	1/1:11,20:31:8.47:1551,8,0	0/0:18,0:18:42.14:0,42,753	1/1:9,10:19:18.06:508,18,0
chr10	98578800	.	TAC	T	856.67	PASS	AB=0.899;AC=22;AF=0.393;AN=56;BaseQRankSum=7.788;DP=566;FS=0.511;HRun=0;HaplotypeScore=80.6719;InbreedingCoeff=-0.3657;MQ=60.45;MQ0=10;MQRankSum=-0.891;QD=2.12;ReadPosRankSum=2.741;VQSLOD=1.5995;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:19:25.57:125,26,0	0/1:12,2:15:31.49:31,0,363	0/1:37,1:17:24.76:25,0,75	0/0:31,0:15:3.01:0,3,38	0/1:17,0:17:22.10:22,0,334	0/1:17,2:20:67.83:68,0,350	0/1:20,0:20:12.25:12,0,227	0/0:16,0:16:17.92:0,18,147	1/1:7,0:20:31.25:154,31,0	0/1:23,3:26:69.88:70,0,459	0/0:9,0:9:9.03:0,9,137	0/1:12,3:16:60.64:61,0,137	0/1:12,1:13:9.71:10,0,266	0/1:10,1:11:46.45:46,0,208	0/1:21,2:23:21.95:22,0,549	0/1:25,2:27:22.42:22,0,548	0/1:27,4:33:99:122,0,391	0/1:7,0:17:40.89:83,0,41	0/1:14,2:16:40.50:40,0,289	0/0:21,0:22:39.12:0,39,573	0/0:38,0:39:57.17:0,57,833	0/0:16,0:16:27.09:0,27,408	0/1:20,1:20:19.27:19,0,312	0/1:17,3:20:31.61:32,0,421	0/1:12,1:13:33.25:33,0,246	0/0:23,0:22:52.07:0,52,521	0/1:17,1:18:26.83:27,0,195	0/0:4,0:6:11.96:0,12,97
chr10	98578857	.	TG	T	1147.64	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.356;DP=609;FS=4.648;HRun=1;HaplotypeScore=98.4270;InbreedingCoeff=0.9965;MQ=59.58;MQ0=3;MQRankSum=-8.381;QD=27.99;ReadPosRankSum=0.892;VQSLOD=3.4459;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:24:50.30:733,50,0	0/0:9,0:9:27.04:0,27,366	0/0:48,1:31:35.44:0,35,736	0/0:25,0:15:41.97:0,42,500	0/0:19,0:19:56.89:0,57,720	0/0:24,0:24:72.02:0,72,923	0/0:19,0:19:40.33:0,40,748	0/0:26,0:26:72.12:0,72,904	0/0:26,0:26:64.14:0,64,853	0/0:22,0:21:56.48:0,56,740	0/0:11,0:11:33.06:0,33,438	0/0:17,0:17:40.78:0,41,450	0/0:20,1:21:27.78:0,28,620	0/0:16,0:16:44.97:0,45,556	0/0:19,0:19:35.35:0,35,645	0/0:16,0:16:39.12:0,39,548	0/0:35,0:34:99:0,102,1260	1/1:5,12:17:43.40:537,43,0	0/0:20,0:20:57.57:0,58,726	0/0:25,0:25:68.94:0,69,849	0/0:26,0:25:75.07:0,75,1038	0/0:21,0:21:60.13:0,60,771	0/0:23,0:23:65.42:0,65,856	0/0:23,0:23:69.07:0,69,885	0/0:20,0:20:60.11:0,60,767	0/0:29,0:29:81.14:0,81,1039	0/0:20,0:19:51.07:0,51,661	0/0:7,0:7:21.06:0,21,276
chr10	98578862	.	TGG	T	708.04	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.584;DP=593;FS=1.847;HRun=2;HaplotypeScore=104.2565;InbreedingCoeff=0.9638;MQ=61.46;MQ0=3;MQRankSum=-8.522;QD=17.27;ReadPosRankSum=0.084;VQSLOD=1.1086;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,2:24:63.63:435,64,0	0/0:9,0:9:27.05:0,27,350	0/0:44,1:28:8.74:0,9,646	0/0:21,0:14:20.79:0,21,319	0/0:21,0:21:62.45:0,62,855	0/0:20,1:21:59.78:0,60,865	0/0:18,0:18:28.47:0,28,756	0/0:23,0:23:43.63:0,44,656	0/0:28,0:28:81.15:0,81,1067	0/0:26,0:25:48.97:0,49,874	0/0:13,0:13:39.11:0,39,550	0/0:18,0:18:47.96:0,48,580	0/0:20,0:20:60:0,60,787	0/0:16,0:16:45.08:0,45,567	0/0:16,0:16:32.61:0,33,546	0/0:17,0:17:38.74:0,39,437	0/0:33,0:32:95.34:0,95,1251	1/1:15,2:17:45.84:394,46,0	0/0:20,0:20:34.13:0,34,704	0/0:23,0:23:65.91:0,66,807	0/0:22,0:21:54.73:0,55,725	0/0:21,0:21:53.99:0,54,757	0/0:24,0:24:66.54:0,67,962	0/0:22,0:22:63.10:0,63,890	0/0:20,0:20:60:0,60,829	0/0:27,0:27:79.38:0,79,883	0/0:20,0:19:46.83:0,47,600	0/0:8,0:8:21.02:0,21,245
chr10	98578864	.	G	GT	835.86	PASS	AB=0.863;AC=15;AF=0.268;AN=56;BaseQRankSum=0.371;DP=589;FS=2.538;HRun=14;HaplotypeScore=94.8645;InbreedingCoeff=0.1660;MQ=62.32;MQ0=3;MQRankSum=-0.919;QD=3.51;ReadPosRankSum=-1.570;VQSLOD=0.9004;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:27.07:115,27,0	0/1:8,1:9:10.42:32,0,10	0/0:37,1:23:9.08:0,9,81	0/0:19,0:13:1.13:0,1,5	0/0:17,1:19:19.98:0,20,247	0/0:20,0:22:14.44:0,14,165	0/0:18,0:18:23.48:0,23,154	1/1:14,11:25:35.83:293,36,0	0/1:27,1:29:5.79:6,0,188	0/0:28,0:28:50.96:0,51,311	0/0:12,1:13:5.22:0,5,149	0/0:18,0:18:22.49:0,22,140	0/0:18,0:21:48.26:0,48,299	0/0:15,0:16:19.50:0,19,121	0/1:13,1:16:7.60:8,0,70	0/0:5,0:17:16.26:0,16,47	0/0:27,1:31:25.90:0,26,266	1/1:17,0:17:26.70:115,27,0	0/1:21,0:21:26.97:27,0,79	0/1:16,3:23:35.75:36,0,152	0/1:18,2:20:50.35:50,0,75	0/0:20,2:22:5.06:0,5,152	0/0:20,0:23:44.64:0,45,279	0/0:21,0:21:38.27:0,38,248	0/0:19,0:20:37.32:0,37,236	0/1:12,11:24:19.69:230,0,20	0/1:14,5:18:29.18:29,0,92	0/1:6,5:11:17.83:64,0,18
chr10	98578866	.	T	TTTTG	1265.67	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=9.076;DP=590;FS=3.939;HRun=0;HaplotypeScore=131.6735;InbreedingCoeff=0.7757;MQ=62.30;MQ0=3;MQRankSum=-8.340;QD=15.82;ReadPosRankSum=1.557;VQSLOD=3.5592;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,8:23:46.42:744,46,0	0/0:9,0:9:26.02:0,26,237	0/1:40,0:22:17.69:18,0,253	0/0:19,0:13:14.44:0,14,130	0/0:21,0:21:54.15:0,54,878	0/0:22,0:22:54.59:0,55,772	0/0:18,0:18:48.06:0,48,655	0/0:25,0:25:62.86:0,63,489	0/0:28,0:28:82.41:0,82,1013	0/0:30,0:29:82.98:0,83,1166	0/0:14,0:14:40.34:0,40,604	0/0:17,0:17:41.96:0,42,552	0/0:21,0:21:63.12:0,63,1001	0/0:16,0:16:44.98:0,45,572	0/0:16,0:16:42:0,42,506	0/0:16,0:16:30.06:0,30,376	0/0:32,0:31:89.10:0,89,1212	1/1:9,6:17:39.02:633,39,0	0/0:21,0:21:58.40:0,58,656	0/0:23,0:23:69.05:0,69,911	0/0:22,0:21:55.19:0,55,603	0/0:21,0:21:57.04:0,57,761	0/0:24,0:24:64.67:0,65,991	0/0:20,0:20:54.07:0,54,841	0/0:20,0:20:60.03:0,60,881	0/0:25,0:25:64.44:0,64,577	0/0:20,0:19:45.46:0,45,555	0/0:10,0:10:23.95:0,24,223
chr10	98579543	.	ACAAG	A	1081.57	PASS	AB=0.995;AC=6;AF=0.107;AN=56;BaseQRankSum=4.492;DP=736;FS=12.859;HRun=0;HaplotypeScore=130.2733;InbreedingCoeff=0.2390;MQ=66.09;MQ0=10;MQRankSum=-1.222;QD=9.09;ReadPosRankSum=-3.499;VQSLOD=1.3092;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:45,1:45:40.46:895,0,40	0/1:12,0:12:8.32:8,0,460	0/0:42,0:20:14.41:0,14,528	0/0:53,0:25:33.77:0,34,759	0/0:10,0:10:27.08:0,27,630	0/0:17,0:17:48.07:0,48,988	0/0:36,0:36:94.19:0,94,1902	0/1:18,0:18:14.93:15,0,750	0/0:29,0:29:78.23:0,78,1680	0/0:23,0:23:68.94:0,69,1399	0/0:16,0:16:31.27:0,31,538	0/0:28,0:28:76.87:0,77,1429	0/0:23,0:23:63.14:0,63,1168	0/0:28,0:28:81.22:0,81,1511	0/0:19,0:19:49.64:0,50,917	0/0:22,0:22:51.17:0,51,964	0/0:26,0:25:72.08:0,72,1298	1/1:2,20:22:15.05:269,15,0	0/0:21,0:21:52.93:0,53,700	0/0:8,0:8:24.08:0,24,564	0/0:74,0:74:99:0,152,3983	0/0:26,0:26:71.44:0,71,1250	0/0:17,0:17:51.06:0,51,936	0/0:50,0:50:99:0,141,2879	0/0:18,0:18:44.76:0,45,1061	0/1:21,0:21:18.12:18,0,580	0/0:22,0:22:64.09:0,64,1412	0/0:9,0:9:4.99:0,5,18
chr10	98579545	.	AAG	A	1350	PASS	AB=0.983;AC=7;AF=0.125;AN=56;BaseQRankSum=5.380;DP=738;FS=20.521;HRun=0;HaplotypeScore=101.9032;InbreedingCoeff=0.4887;MQ=64.46;MQ0=11;MQRankSum=1.781;QD=11.44;ReadPosRankSum=-3.054;VQSLOD=1.0393;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:42,3:44:99:1325,101,0	0/1:12,0:12:8.37:8,0,396	0/0:39,1:17:13.48:0,13,527	0/0:56,1:25:32.90:0,33,735	0/0:10,0:10:27.02:0,27,477	0/0:17,0:17:47.97:0,48,817	0/0:36,0:36:97.11:0,97,1642	0/1:18,1:19:12.69:13,0,757	0/0:29,0:29:62.41:0,62,1311	0/0:22,1:23:44.92:0,45,1132	0/0:14,0:15:10.18:0,10,407	0/0:27,0:27:55.39:0,55,1098	0/0:23,0:23:61.15:0,61,930	0/0:28,0:28:84.08:0,84,1304	0/0:19,0:19:49.64:0,50,788	0/0:22,0:22:51.03:0,51,724	0/0:26,0:25:71.92:0,72,1135	1/1:21,0:21:14.98:125,15,0	0/0:21,0:21:36.92:0,37,669	0/0:9,0:9:27.09:0,27,503	0/0:75,1:76:99:0,126,3234	0/0:26,0:26:23.06:0,23,957	0/0:17,0:17:50.74:0,51,716	0/0:49,0:49:99:0,139,2352	0/0:18,0:18:45.90:0,46,825	0/1:21,0:21:16.31:16,0,551	0/0:23,0:23:66.59:0,67,1155	0/0:9,0:9:5.86:0,6,38
chr10	98579547	.	GCA	G	694.13	PASS	AB=0.900;AC=20;AF=0.357;AN=56;BaseQRankSum=6.317;DP=746;FS=2.215;HRun=0;HaplotypeScore=102.1263;InbreedingCoeff=-0.3593;MQ=62.78;MQ0=15;MQRankSum=-1.110;QD=1.57;ReadPosRankSum=-0.928;VQSLOD=1.4226;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:39.85:0,40,414	0/1:10,1:11:47.83:48,0,167	0/1:39,0:15:0:0,0,0	0/0:59,1:23:5.96:0,6,45	0/1:10,1:11:4.09:4,0,380	0/1:14,3:17:38.31:38,0,314	0/0:35,1:36:15.96:0,16,630	0/1:15,0:19:6.04:6,0,39	0/0:27,3:30:7.29:0,7,698	0/1:21,2:23:17.50:17,0,569	0/1:12,3:15:99:124,0,157	0/1:26,1:28:90.85:91,0,554	0/1:18,4:22:88.88:89,0,449	0/1:22,2:24:23.25:23,0,521	0/1:13,3:18:21.26:21,0,265	0/0:8,0:23:30:0,30,281	0/0:27,1:27:4.59:0,5,445	0/1:24,0:24:29.36:29,0,60	0/1:21,1:21:29.63:30,0,165	0/0:10,0:10:20.56:0,21,283	0/1:72,4:77:57.49:57,0,1569	0/1:24,2:26:68.56:69,0,423	0/1:16,1:18:94.22:94,0,366	0/0:48,0:48:64.39:0,64,1245	0/1:18,0:18:0.61:1,0,429	0/1:9,0:21:75.49:75,0,112	0/0:21,1:23:11.43:0,11,592	1/1:0,0:9:5.68:28,6,0
chr10	98581863	.	AAAT	A	2402.27	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.494;DP=492;FS=4.893;HRun=0;HaplotypeScore=85.8420;InbreedingCoeff=0.9967;MQ=74.94;MQ0=0;MQRankSum=-2.329;QD=33.36;ReadPosRankSum=-0.204;VQSLOD=3.4786;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.25:0,72,1483	0/0:10,0:10:24.08:0,24,508	0/0:17,0:17:45.15:0,45,865	0/0:15,0:14:33.11:0,33,689	0/0:23,0:23:51.16:0,51,1029	0/0:12,0:12:36.12:0,36,662	0/0:27,0:27:75.26:0,75,1544	1/1:8,12:20:36.11:527,36,0	0/0:18,0:18:54.19:0,54,1145	0/0:20,0:20:60.20:0,60,1197	0/0:21,0:21:54.18:0,54,1092	0/0:27,0:27:78.27:0,78,1623	0/0:13,0:13:36.12:0,36,732	0/0:15,0:15:45.15:0,45,949	0/0:13,0:13:39.13:0,39,782	1/1:1,15:16:42.14:640,42,0	0/0:16,0:16:48.16:0,48,953	0/0:12,0:12:36.12:0,36,755	0/0:25,0:25:57.20:0,57,1155	0/0:14,0:14:39.13:0,39,818	0/0:10,0:10:30.08:0,30,595	0/0:15,0:15:44.82:0,45,863	0/0:17,0:17:42.13:0,42,796	0/0:26,0:26:75.26:0,75,1508	0/0:9,0:9:21.07:0,21,445	1/1:2,25:27:75.19:1076,75,0	0/0:17,0:16:45.15:0,45,948	1/1:0,9:9:21.07:320,21,0
chr10	98582390	.	T	TCCC	222.86	PASS	AB=0.675;AC=3;AF=0.054;AN=56;BaseQRankSum=6.208;DP=495;FS=25.497;HRun=0;HaplotypeScore=84.0990;InbreedingCoeff=-0.0592;MQ=76.52;MQ0=1;MQRankSum=-0.998;QD=5.18;ReadPosRankSum=-2.871;VQSLOD=0.1055;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,4:23:99:179,0,256	0/0:5,0:5:12.04:0,12,224	0/0:24,0:16:38.07:0,38,568	0/0:27,0:21:44.31:0,44,662	0/0:14,0:14:39.13:0,39,686	0/0:17,0:17:51.17:0,51,893	0/0:20,0:20:60.17:0,60,1051	0/0:16,0:16:11.42:0,11,231	0/0:22,0:22:66.23:0,66,1173	0/0:13,0:13:36.12:0,36,634	0/0:16,0:17:46.81:0,47,833	0/0:18,0:18:54.18:0,54,930	0/0:11,0:11:33.11:0,33,563	0/0:12,0:12:36.12:0,36,650	0/0:21,0:21:63.22:0,63,1135	0/1:3,2:8:70.37:71,0,70	0/0:25,0:25:75.23:0,75,1353	0/1:6,2:12:73.10:73,0,161	0/0:17,0:17:51.17:0,51,893	0/0:20,0:20:60.20:0,60,1042	0/0:19,0:19:57.18:0,57,1011	0/0:20,0:20:60.19:0,60,984	0/0:10,0:10:30.10:0,30,475	0/0:23,0:23:69.24:0,69,1228	0/0:15,0:15:45.14:0,45,758	0/0:15,0:15:40.19:0,40,394	0/0:37,0:35:99:0,111,1982	0/0:14,0:14:32.51:0,33,293
chr10	98583235	.	A	AC	5166.79	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-16.484;DP=693;FS=7.560;HRun=6;HaplotypeScore=61.3157;InbreedingCoeff=0.9990;MQ=80.33;MQ0=0;MQRankSum=-6.884;QD=31.70;ReadPosRankSum=-2.057;VQSLOD=4.5072;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,38:45:80.74:1328,81,0	0/0:8,0:8:21.04:0,21,214	0/0:27,0:27:66.14:0,66,670	0/0:24,0:24:61.90:0,62,603	0/0:20,0:20:54.12:0,54,549	0/0:24,0:24:66.13:0,66,666	0/0:21,0:21:57.12:0,57,581	1/1:3,23:26:69.19:852,69,0	0/0:27,0:27:81.18:0,81,825	0/0:28,0:28:81.18:0,81,826	0/0:23,0:23:69.15:0,69,698	0/0:24,0:24:72.16:0,72,734	0/0:27,0:27:78.17:0,78,796	0/0:22,0:22:60.13:0,60,612	0/0:25,0:25:72.16:0,72,735	1/1:1,26:27:75.24:944,75,0	0/0:28,0:28:78.17:0,78,795	1/1:3,28:31:75.24:942,75,0	0/0:18,0:18:54.11:0,54,546	0/0:28,0:28:84.19:0,84,857	0/0:28,0:28:81.18:0,81,826	0/0:25,0:25:72.16:0,72,735	0/0:25,0:25:57.12:0,57,581	0/0:29,0:29:81.18:0,81,826	0/0:29,0:29:81.18:0,81,825	1/1:1,19:20:29.57:687,30,0	0/0:20,0:20:57.13:0,57,581	1/1:0,14:14:33.11:415,33,0
chr10	98585869	.	GC	G	298.33	PASS	AB=0.888;AC=5;AF=0.089;AN=56;BaseQRankSum=4.954;DP=441;FS=0.000;HRun=10;HaplotypeScore=51.6100;InbreedingCoeff=0.2503;MQ=85.75;MQ0=0;MQRankSum=0.101;QD=4.59;ReadPosRankSum=-0.559;VQSLOD=-0.0305;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:22:30.43:0,30,153	0/0:10,0:10:24.05:0,24,257	0/1:14,2:16:22.56:23,0,117	0/0:15,0:16:9.64:0,10,96	0/0:16,0:16:36.07:0,36,381	0/1:15,2:18:13.03:13,0,307	0/0:21,1:22:28.06:0,28,520	0/0:16,0:18:26.89:0,27,266	0/0:22,0:22:54.12:0,54,581	0/0:8,0:8:15.03:0,15,160	0/0:15,1:16:16.04:0,16,394	0/0:11,1:12:3.99:0,4,249	0/0:8,0:8:21.06:0,21,232	0/1:12,2:14:19:19,0,258	0/0:10,1:12:3.85:0,4,246	1/1:1,16:17:41.99:365,42,0	0/0:31,0:31:78.17:0,78,836	0/0:5,0:14:8.52:0,9,43	0/0:7,0:7:20.96:0,21,208	0/0:15,0:15:33.08:0,33,357	0/0:30,0:30:81.17:0,81,869	0/0:8,0:8:21.06:0,21,232	0/0:16,1:17:16.08:0,16,380	0/0:24,0:24:60.14:0,60,648	0/0:11,1:12:7.02:0,7,297	0/0:11,0:11:21.06:0,21,232	0/0:16,1:17:22.06:0,22,455	0/0:8,0:8:18.03:0,18,190
chr10	98585993	.	ATTT	A	2829.29	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.190;DP=504;FS=4.222;HRun=12;HaplotypeScore=82.7964;InbreedingCoeff=0.9708;MQ=80.41;MQ0=0;MQRankSum=-1.180;QD=26.69;ReadPosRankSum=4.414;VQSLOD=3.0689;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,31:35:81.20:1023,81,0	0/0:9,0:11:27.07:0,27,480	0/0:18,0:16:15.86:0,16,263	0/0:19,0:19:28.65:0,29,322	0/0:20,0:23:54.18:0,54,1013	0/0:14,0:15:45.11:0,45,786	0/0:19,0:24:66.15:0,66,1129	1/1:5,19:24:51.08:617,51,0	0/0:16,0:16:45.14:0,45,844	0/0:21,0:22:48.12:0,48,805	0/0:9,0:10:30.09:0,30,511	0/0:14,0:14:36.11:0,36,627	0/0:17,0:17:42.08:0,42,664	0/0:9,0:10:30.07:0,30,508	0/0:12,0:13:33.07:0,33,503	0/0:1,0:14:38.85:0,39,299	0/0:17,0:17:45.12:0,45,793	1/1:2,18:20:51.16:644,51,0	0/0:14,0:16:45.13:0,45,801	0/0:20,0:21:60.18:0,60,1089	0/0:5,0:5:12.04:0,12,237	0/0:12,0:15:37.33:0,37,597	0/0:20,0:26:60.14:0,60,1007	0/0:25,0:30:75.21:0,75,1313	0/0:16,0:16:42.13:0,42,769	1/1:2,15:19:51.01:605,51,0	0/0:23,0:24:66.14:0,66,1091	1/1:2,4:7:7.60:111,8,0
chr10	98586299	.	A	AGCCTTGGATTCG	5752.74	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.154;DP=520;FS=10.726;HRun=0;HaplotypeScore=172.2252;InbreedingCoeff=0.9973;MQ=87.98;MQ0=1;MQRankSum=-9.681;QD=127.84;ReadPosRankSum=-2.262;VQSLOD=4.4240;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,15:28:75.26:3798,75,0	0/0:12,0:12:36.12:0,36,1327	0/0:23,0:23:65.99:0,66,1817	0/0:16,0:16:39.09:0,39,1195	0/0:12,0:12:36.12:0,36,1287	0/0:15,0:15:42.14:0,42,1512	0/0:30,0:30:84.26:0,84,2913	0/0:16,0:16:45.15:0,45,1608	0/0:26,0:26:78.27:0,78,2748	0/0:15,0:15:42.14:0,42,1461	0/0:9,0:9:24.08:0,24,787	0/0:27,0:27:78.27:0,78,2869	0/0:16,0:16:48.16:0,48,1737	0/0:23,0:23:66.21:0,66,2350	0/0:25,0:25:72.25:0,72,2643	0/0:29,0:29:84.27:0,84,3038	0/0:20,0:20:60.18:0,60,2108	1/1:7,6:17:36.12:1954,36,0	0/0:17,0:17:51.16:0,51,1778	0/0:10,0:10:27.09:0,27,990	0/0:21,0:20:57.20:0,57,2197	0/0:13,0:13:36.12:0,36,1342	0/0:14,0:14:39.13:0,39,1500	0/0:26,0:26:78.22:0,78,2696	0/0:10,0:10:30.10:0,30,1104	0/0:19,0:19:57.19:0,57,2112	0/0:22,0:22:66.23:0,66,2390	0/0:9,0:9:27.09:0,27,1022
chr10	98586643	.	T	TCC	1085.99	PASS	AB=0.852;AC=20;AF=0.357;AN=56;BaseQRankSum=-1.304;DP=234;FS=0.000;HRun=1;HaplotypeScore=115.4804;InbreedingCoeff=-0.5674;MQ=37.52;MQ0=8;MQRankSum=1.062;QD=6.00;ReadPosRankSum=3.172;VQSLOD=-0.0167;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,3:17:70.67:88,0,71	0/1:2,1:3:30.08:32,0,30	0/0:11,0:2:6.02:0,6,79	0/0:13,0:5:5.94:0,6,87	0/1:5,1:6:26.35:26,0,29	0/1:9,3:12:99:179,0,104	0/1:4,1:5:42.47:42,0,80	0/1:17,0:14:49.53:50,0,278	0/1:9,2:11:69.69:70,0,190	0/1:7,0:7:73.28:73,0,117	0/0:1,0:1:3.01:0,3,35	0/1:14,0:13:10.87:11,0,293	0/1:4,1:5:55.75:56,0,77	0/1:5,1:6:48.49:48,0,94	0/1:6,2:8:56.47:56,0,207	0/0:7,0:7:8.68:0,9,74	0/0:4,0:4:5.91:0,6,39	0/1:5,0:3:20.29:20,0,37	0/0:10,0:8:7.75:0,8,131	0/1:6,3:9:84.44:84,0,119	0/1:2,2:4:29.73:30,0,38	0/1:10,3:12:99:132,0,209	0/0:4,0:4:11.97:0,12,145	0/1:6,2:6:0.29:31,0,0	0/1:8,2:10:69.74:70,0,278	0/1:10,1:11:69.38:101,0,69	0/1:8,2:10:37.44:37,0,151	0/0:3,0:3:6.02:0,6,90
chr10	98586650	.	CGTT	C	768.81	PASS	AB=0.894;AC=19;AF=0.339;AN=56;BaseQRankSum=-0.624;DP=163;FS=0.000;HRun=0;HaplotypeScore=102.6780;InbreedingCoeff=-0.3599;MQ=39.75;MQ0=2;MQRankSum=0.456;QD=7.25;ReadPosRankSum=2.367;VQSLOD=2.2833;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,3:11:68.56:76,0,69	1/1:1,1:2:6.02:88,6,0	0/0:8,0:2:5.95:0,6,72	0/0:11,0:5:8.68:0,9,119	0/1:3,0:3:13.71:28,0,14	0/1:6,1:8:99:107,0,133	0/1:3,0:3:9.76:10,0,101	0/0:9,0:9:21.06:0,21,344	0/1:8,0:8:13.83:14,0,232	0/1:2,1:3:44.71:45,0,98	0/0:1,0:1:3.01:0,3,53	0/0:8,1:8:24.08:0,24,394	0/1:3,0:3:5.11:5,0,97	0/1:3,1:4:92.42:92,0,93	0/1:8,0:8:5.35:5,0,291	0/0:6,0:6:8.99:0,9,127	0/0:4,0:4:6.02:0,6,97	0/1:1,1:2:16.79:17,0,45	0/0:4,0:4:6.02:0,6,105	0/1:7,0:7:99:104,0,142	0/1:4,0:4:44.69:58,0,45	0/1:9,2:11:99:110,0,258	0/0:3,0:3:9.03:0,9,156	0/1:4,2:5:0.44:11,0,0	0/1:9,0:9:35.06:35,0,331	0/1:3,1:4:63.89:64,0,95	0/1:10,0:10:53.16:53,0,158	0/0:2,0:2:6.02:0,6,106
chr10	98586655	.	CT	C	269.11	PASS	AB=0.726;AC=19;AF=0.339;AN=56;BaseQRankSum=-0.100;DP=163;FS=0.000;HRun=1;HaplotypeScore=112.2422;InbreedingCoeff=-0.2362;MQ=44.46;MQ0=1;MQRankSum=0.039;QD=2.83;ReadPosRankSum=-0.179;VQSLOD=-0.5675;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:4,3:10:36.15:36,0,50	1/1:0,1:2:5.98:46,6,0	0/0:8,0:3:0.82:0,1,63	0/0:9,0:5:8.84:0,9,101	1/1:2,1:3:2.03:6,2,0	0/1:4,3:8:66.57:67,0,119	0/1:2,1:3:14.92:15,0,86	0/0:10,0:10:24.08:0,24,371	0/1:7,2:9:24.94:25,0,260	0/1:2,0:3:12.60:13,0,77	0/0:2,0:2:3.01:0,3,47	0/0:8,0:8:21.07:0,21,326	0/1:2,1:3:12.45:12,0,86	0/1:2,1:4:32.11:32,0,83	0/1:6,2:8:23.61:24,0,261	0/0:6,0:6:12.04:0,12,177	0/0:3,0:3:6.02:0,6,95	0/0:1,0:2:2.98:0,3,48	0/0:3,0:3:6.02:0,6,96	0/1:5,3:8:4.33:4,0,164	0/1:2,2:4:19.06:19,0,40	0/1:6,3:11:47.48:47,0,252	0/0:4,0:4:9.03:0,9,141	1/1:1,2:4:2.98:22,3,0	0/0:7,2:9:0.09:0,0,306	0/1:3,1:5:40.48:40,0,120	0/1:7,2:9:8.57:9,0,156	0/0:2,0:2:6.02:0,6,95
chr10	98586776	.	TA	T	897.57	PASS	AC=28;AF=0.933;AN=30;BaseQRankSum=1.444;DP=39;FS=0.000;HRun=1;HaplotypeScore=95.9807;InbreedingCoeff=0.1924;MQ=63.82;MQ0=0;MQRankSum=-1.636;QD=24.93;ReadPosRankSum=1.444;VQSLOD=3.5606;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,3:3:8.96:87,9,0	./.	0/0:3,0:2:1.75:0,2,26	1/1:0,7:7:18.94:212,19,0	./.	./.	./.	./.	1/1:0,3:3:9.03:105,9,0	1/1:1,3:4:8.97:92,9,0	./.	./.	1/1:0,2:1:3.01:33,3,0	./.	1/1:0,1:1:1.82:5,2,0	1/1:0,1:1:2.97:20,3,0	./.	./.	1/1:0,3:3:8.86:87,9,0	./.	1/1:0,1:1:3.01:36,3,0	1/1:0,3:3:8.97:91,9,0	./.	1/1:0,4:4:11.89:109,12,0	1/1:0,1:1:3:26,3,0	1/1:0,1:1:3.01:36,3,0	1/1:0,2:2:5.23:44,5,0
chr10	98586779	.	G	GA	261.73	PASS	AB=1.000;AC=29;AF=0.967;AN=30;BaseQRankSum=-0.110;DP=39;FS=0.000;HRun=0;HaplotypeScore=98.5745;InbreedingCoeff=0.0892;MQ=63.82;MQ0=0;MQRankSum=-0.183;QD=6.71;ReadPosRankSum=0.476;VQSLOD=3.0069;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,3:3:7.56:29,8,0	./.	0/1:3,0:2:30.82:41,0,31	1/1:0,7:7:13.72:46,14,0	./.	./.	./.	./.	1/1:0,3:3:8.74:50,9,0	1/1:1,3:4:7.84:32,8,0	./.	./.	1/1:0,2:1:2.22:7,2,0	./.	1/1:0,1:1:2.50:9,2,0	1/1:0,1:1:0.47:1,0,0	./.	./.	1/1:0,3:3:5.24:21,5,0	./.	1/1:0,1:1:2.50:9,2,0	1/1:0,3:3:7.66:30,8,0	./.	1/1:0,4:4:10.51:42,11,0	1/1:0,1:1:2.04:6,2,0	1/1:0,1:1:2.37:8,2,0	1/1:0,2:2:1.64:12,2,0
chr10	98586783	.	AC	A	864.15	PASS	AC=26;AF=0.867;AN=30;BaseQRankSum=1.985;DP=39;FS=11.903;HRun=1;HaplotypeScore=94.5775;InbreedingCoeff=0.2729;MQ=63.82;MQ0=0;MQRankSum=-2.374;QD=24.69;ReadPosRankSum=1.829;VQSLOD=2.5155;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,3:3:6.02:68,6,0	./.	0/0:2,0:2:5.75:0,6,49	1/1:0,7:7:18.94:221,19,0	./.	./.	./.	./.	1/1:0,3:3:9.03:113,9,0	1/1:1,3:4:8.99:94,9,0	./.	./.	1/1:0,2:1:3.01:38,3,0	./.	0/0:0,1:1:0:0,0,0	1/1:0,1:1:2.96:19,3,0	./.	./.	1/1:0,3:3:8.89:89,9,0	./.	1/1:0,1:1:3.01:38,3,0	1/1:0,3:3:8.99:96,9,0	./.	1/1:0,4:4:6.02:73,6,0	1/1:0,1:1:3:25,3,0	1/1:0,1:1:3.01:36,3,0	1/1:0,2:2:5.23:43,5,0
chr10	98586801	.	TTGCACC	T	922.42	PASS	AB=0.889;AC=19;AF=0.731;AN=26;BaseQRankSum=-4.155;DP=47;FS=0.000;HRun=0;HaplotypeScore=104.3067;InbreedingCoeff=0.2267;MQ=59.34;MQ0=0;MQRankSum=0.853;QD=23.06;ReadPosRankSum=-3.397;VQSLOD=2.2561;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:4,1:5:5.93:108,6,0	./.	0/0:2,0:2:2.58:0,3,18	0/1:7,1:8:9.63:73,0,10	./.	./.	./.	./.	1/1:1,2:3:4.49:139,4,0	1/1:6,3:9:6.20:213,6,0	./.	./.	1/1:1,0:1:2.98:22,3,0	1/1:1,0:1:1.82:5,2,0	./.	./.	./.	./.	1/1:2,4:6:5.33:272,5,0	./.	1/1:1,1:2:4.26:72,4,0	0/0:3,0:3:1.95:0,2,8	./.	./.	1/1:1,1:2:2.99:24,3,0	0/0:1,0:1:1.82:0,2,5	1/1:3,0:3:6.01:87,6,0
chr10	98588687	.	CCACCACCACCACCACCACCAT	C	442.04	PASS	AB=1.000;AC=10;AF=0.200;AN=50;BaseQRankSum=4.185;DP=421;FS=18.896;HRun=0;HaplotypeScore=172.5864;InbreedingCoeff=0.4950;MQ=46.86;MQ0=35;MQRankSum=-4.442;QD=6.70;ReadPosRankSum=-1.466;VQSLOD=0.9246;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:8.38:38,8,0	./.	./.	./.	0/0:4,0:4:6.02:0,6,248	0/0:11,0:9:11.35:0,11,532	0/0:30,0:24:41.90:0,42,1486	0/0:14,0:10:0.47:0,0,1	0/0:15,0:15:33.11:0,33,1134	0/0:12,0:10:14.79:0,15,620	0/1:6,0:4:39.21:39,0,256	0/0:29,0:27:45.14:0,45,1809	0/0:7,0:6:6.02:0,6,248	0/0:15,0:14:23.87:0,24,768	0/0:15,0:14:12.49:0,12,1284	1/1:11,10:20:2.92:17,3,0	0/0:14,0:13:26.69:0,27,1479	1/1:7,0:7:9.47:144,9,0	0/0:13,0:11:11.46:0,11,366	0/0:11,0:10:0.05:0,0,520	0/0:53,0:45:66.39:0,66,2683	0/0:9,0:7:12.04:0,12,446	0/0:4,0:3:6.02:0,6,289	0/0:36,0:34:59.22:0,59,3278	0/0:15,0:13:26.94:0,27,1139	0/1:14,0:12:8.54:307,0,9	0/0:11,0:9:21.07:0,21,1087	1/1:4,0:3:3.01:33,3,0
chr10	98590556	.	ATG	A	2776.14	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.751;DP=1222;FS=0.000;HRun=0;HaplotypeScore=184.8563;InbreedingCoeff=0.9861;MQ=57.48;MQ0=9;MQRankSum=-4.767;QD=23.33;ReadPosRankSum=-1.607;VQSLOD=3.6774;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,27:50:81.47:1038,81,0	0/0:19,0:19:54.18:0,54,915	0/0:56,0:25:56.96:0,57,818	0/0:53,0:29:75.06:0,75,1141	0/0:30,0:30:84.27:0,84,1404	0/0:26,0:26:66.19:0,66,1074	0/0:43,0:43:99:0,114,1906	0/0:53,0:53:99:0,137,2209	0/0:63,0:63:99:0,162,2628	0/0:56,0:56:99:0,147,2471	0/0:25,0:25:72.23:0,72,1213	0/0:60,0:60:99:0,172,2844	0/0:47,0:47:99:0,129,2211	0/0:47,0:47:99:0,123,2035	0/0:55,0:55:99:0,154,2626	1/1:1,44:45:99:1357,102,0	0/0:35,0:35:96.33:0,96,1648	1/1:12,11:23:18.06:523,18,0	0/0:34,0:33:78.22:0,78,1278	0/0:38,0:38:99:0,105,1727	0/0:122,0:122:99:0,312,5091	0/0:36,0:36:99:0,99,1677	0/0:21,0:21:54.17:0,54,901	0/0:76,0:76:99:0,183,3200	0/0:30,0:30:87.29:0,87,1471	0/0:43,0:43:99:0,105,1765	0/0:29,0:29:75.25:0,75,1246	0/0:4,0:4:12:0,12,151
chr10	98590590	.	GTA	G	2458.09	PASS	AB=0.886;AC=7;AF=0.125;AN=56;BaseQRankSum=10.871;DP=1239;FS=5.648;HRun=0;HaplotypeScore=198.6219;InbreedingCoeff=0.5509;MQ=59.11;MQ0=3;MQRankSum=-3.454;QD=11.43;ReadPosRankSum=-5.649;VQSLOD=2.0570;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:12,36:48:65.20:790,65,0	0/0:15,0:15:45.11:0,45,825	0/0:53,0:32:34.39:0,34,1098	0/0:65,1:48:74.68:0,75,1757	0/0:28,0:28:78.20:0,78,1358	0/0:20,0:20:57.10:0,57,897	0/0:47,0:47:99:0,141,2500	0/1:58,0:58:99:337,0,566	0/0:54,0:54:99:0,156,2849	0/0:56,0:56:99:0,159,2705	0/0:31,0:31:90.23:0,90,1569	0/0:61,0:61:99:0,175,3229	0/0:49,0:49:99:0,147,2521	0/0:56,0:56:99:0,165,2988	0/0:58,0:58:99:0,175,3218	1/1:16,32:48:92.03:988,92,0	0/0:41,0:41:99:0,120,2127	0/1:8,8:17:5.15:415,0,5	0/0:30,0:29:78.44:0,78,1272	0/0:38,0:38:99:0,114,1890	0/0:128,0:127:99:0,314,5848	0/0:38,0:38:99:0,108,1865	0/0:24,0:24:63.18:0,63,1142	0/0:69,0:68:99:0,193,3449	0/0:26,0:26:78.23:0,78,1405	0/1:43,1:44:70.24:70,0,725	0/0:31,0:31:93.19:0,93,1600	0/0:4,0:4:9.84:0,10,64
chr10	98590600	.	GTC	G	776.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=12.245;DP=1226;FS=15.289;HRun=0;HaplotypeScore=198.5390;InbreedingCoeff=0.8174;MQ=60.12;MQ0=3;MQRankSum=-7.834;QD=18.05;ReadPosRankSum=-2.869;VQSLOD=2.0556;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,1:45:20.65:0,21,210	0/0:16,0:16:48.12:0,48,808	0/0:49,0:35:71.50:0,71,1432	0/0:73,1:55:21.58:0,22,1610	0/0:25,0:25:72.23:0,72,1294	0/0:20,0:20:57.12:0,57,961	0/0:52,0:52:99:0,153,2619	0/0:53,0:54:99:0,111,2040	0/0:54,0:54:99:0,159,2850	0/0:57,0:57:99:0,171,3041	0/0:34,0:34:99:0,102,1783	0/0:60,0:60:99:0,177,3205	0/0:53,0:53:99:0,159,2721	0/0:52,0:52:99:0,154,2871	0/0:58,0:58:99:0,175,3159	1/1:12,31:43:77.38:871,77,0	0/0:44,0:44:99:0,126,2249	0/0:18,0:18:2.71:0,3,110	0/0:24,0:24:72.23:0,72,1323	0/0:38,0:38:99:0,114,2084	0/0:126,0:125:99:0,337,5952	0/0:36,0:36:99:0,105,1891	0/0:25,0:25:69.23:0,69,1292	0/0:67,0:66:99:0,176,3406	0/0:24,0:24:72.25:0,72,1353	0/0:43,0:43:99:0,129,2057	0/0:31,0:31:90.26:0,90,1658	0/0:4,0:4:12.04:0,12,194
chr10	98592046	.	TCTGCCGCCATAC	T	6073.57	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.739;DP=589;FS=31.785;HRun=0;HaplotypeScore=205.8532;InbreedingCoeff=0.9944;MQ=89.34;MQ0=0;MQRankSum=-9.338;QD=93.44;ReadPosRankSum=1.171;VQSLOD=2.8764;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.25:0,81,4108	0/0:12,0:12:36.11:0,36,1744	0/0:22,0:22:58.44:0,58,2648	0/0:24,0:24:19.64:0,20,2921	0/0:17,0:17:45.15:0,45,2611	0/0:19,0:19:51.17:0,51,2881	0/0:24,0:24:69.24:0,69,3843	1/1:6,24:30:72.25:2498,72,0	0/0:22,0:22:63.20:0,63,3663	0/0:15,0:15:42.14:0,42,2391	0/0:7,0:7:18.06:0,18,970	0/0:19,0:19:57.18:0,57,2945	0/0:41,0:41:99:0,120,7166	0/0:21,0:21:60.18:0,60,2909	0/0:21,0:21:60.20:0,60,3245	0/0:28,0:28:78.27:0,78,4504	0/0:51,0:51:99:0,147,8802	0/0:23,0:23:66.23:0,66,4014	0/0:10,0:10:30.10:0,30,1631	0/0:13,0:13:33.11:0,33,1868	0/0:23,0:23:63.21:0,63,3206	0/0:12,0:12:30.09:0,30,1423	0/0:15,0:15:42.14:0,42,2501	0/0:18,0:18:51.18:0,51,2679	0/0:14,0:14:39.13:0,39,2190	1/1:2,23:25:69.24:2547,69,0	0/0:25,0:24:69.24:0,69,4244	1/1:0,10:10:30.10:1029,30,0
chr10	98594364	.	CA	C	6073.24	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.156;DP=780;FS=11.331;HRun=2;HaplotypeScore=76.2575;InbreedingCoeff=0.9999;MQ=86.33;MQ0=0;MQRankSum=-3.320;QD=36.81;ReadPosRankSum=-0.030;VQSLOD=4.4569;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:99:1324,102,0	0/0:12,0:12:33.10:0,33,476	0/0:24,0:24:71.79:0,72,912	0/0:27,0:27:75.22:0,75,966	0/0:22,0:22:66.22:0,66,989	0/0:36,0:36:99:0,105,1552	0/0:26,0:26:75.25:0,75,1103	1/1:1,28:29:84.21:1045,84,0	0/0:30,0:30:90.30:0,90,1346	0/0:32,0:32:96.32:0,96,1429	0/0:24,0:24:72.22:0,72,1037	0/0:29,0:29:84.28:0,84,1259	0/0:23,0:23:69.23:0,69,1031	0/0:24,0:24:72.24:0,72,1079	0/0:36,0:36:99:0,108,1619	1/1:1,28:29:81.26:1052,81,0	0/0:52,0:52:99:0,157,2314	1/1:0,24:24:72.23:934,72,0	0/0:24,0:24:69.22:0,69,1014	0/0:20,0:20:60.19:0,60,870	0/0:54,0:54:99:0,163,2414	0/0:24,0:24:69.22:0,69,1012	0/0:12,0:12:33.11:0,33,495	0/0:41,0:41:99:0,123,1840	0/0:13,0:13:36.12:0,36,540	1/1:0,26:26:78.21:980,78,0	0/0:30,0:30:87.28:0,87,1282	1/1:0,22:22:57.18:738,57,0
chr10	98595276	.	T	TG	1508.49	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.161;DP=664;FS=3.421;HRun=7;HaplotypeScore=115.4821;InbreedingCoeff=0.9806;MQ=78.05;MQ0=0;MQRankSum=-7.665;QD=26.46;ReadPosRankSum=-1.887;VQSLOD=2.2662;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:54.17:650,54,0	0/0:9,0:9:18.01:0,18,168	0/0:16,0:16:35.92:0,36,322	0/0:18,0:18:10.12:0,10,240	0/0:25,0:25:63.10:0,63,608	0/0:27,0:27:72.11:0,72,695	0/0:29,0:29:84.13:0,84,811	0/0:23,0:23:50.99:0,51,471	0/0:20,0:20:48.05:0,48,456	0/0:27,0:27:78.13:0,78,753	0/0:28,0:28:77.46:0,77,719	0/0:27,0:27:75.11:0,75,723	0/0:25,0:25:72.08:0,72,678	0/0:19,0:19:54.06:0,54,514	0/0:34,0:34:78.11:0,78,753	1/1:4,12:16:36.11:433,36,0	0/0:37,0:37:99:0,105,1005	1/1:2,15:17:48.13:568,48,0	0/0:15,0:15:33.05:0,33,319	0/0:21,0:21:51.07:0,51,488	0/0:37,0:37:99:0,102,976	0/0:30,0:30:78.12:0,78,753	0/0:18,0:18:40.30:0,40,375	0/0:23,0:23:54.07:0,54,521	0/0:20,0:20:51.01:0,51,481	0/0:21,0:21:54.08:0,54,520	0/0:39,0:39:99:0,108,1030	0/0:19,0:19:45.06:0,45,434
chr10	98595302	.	G	GT	2580.81	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.314;DP=633;FS=5.220;HRun=1;HaplotypeScore=129.6001;InbreedingCoeff=0.9618;MQ=83.45;MQ0=0;MQRankSum=-10.129;QD=20.32;ReadPosRankSum=-2.745;VQSLOD=2.8849;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:26:56.99:510,57,0	0/0:10,0:10:23.33:0,23,137	0/0:18,0:18:9.99:0,10,133	0/0:23,0:24:41.45:0,41,371	0/0:20,0:20:28.78:0,29,270	0/0:26,0:26:56.28:0,56,413	0/0:27,0:27:78.79:0,79,451	1/1:7,26:33:74.87:805,75,0	0/0:18,0:18:52.89:0,53,324	0/0:26,0:26:39.92:0,40,297	0/0:22,0:22:61.80:0,62,393	0/0:31,0:31:90.99:0,91,559	0/0:21,0:21:55.70:0,56,331	0/0:19,0:19:52.73:0,53,327	0/0:28,0:28:75.79:0,76,437	1/1:5,13:18:17.80:356,18,0	0/0:35,0:35:77.84:0,78,558	1/1:6,11:17:5.47:331,5,0	0/0:18,0:18:20.25:0,20,193	0/0:18,0:18:52.69:0,53,310	0/0:37,0:37:99:0,105,623	0/0:23,0:23:30.69:0,31,283	0/0:17,0:17:49.81:0,50,300	0/0:20,0:20:55.08:0,55,327	0/0:16,0:16:23.17:0,23,260	1/1:6,14:20:21.08:375,21,0	0/0:32,0:32:90.97:0,91,569	1/1:0,13:13:39.07:387,39,0
chr10	98595303	.	G	GT	2542.44	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=9.967;DP=626;FS=10.137;HRun=0;HaplotypeScore=126.1151;InbreedingCoeff=0.8730;MQ=83.04;MQ0=0;MQRankSum=-9.294;QD=18.83;ReadPosRankSum=-3.475;VQSLOD=3.7524;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:47.98:421,48,0	0/1:10,0:10:23.96:24,0,75	0/0:17,0:17:8.47:0,8,104	0/0:24,0:24:12.79:0,13,256	0/0:20,0:20:48.40:0,48,243	0/0:26,0:26:71.32:0,71,358	0/0:28,0:28:76.38:0,76,370	1/1:6,26:32:80.94:764,81,0	0/0:18,0:18:51.63:0,52,269	0/0:24,0:24:36.33:0,36,231	0/0:21,0:21:60.41:0,60,330	0/0:31,0:31:70.80:0,71,431	0/0:20,0:20:54.24:0,54,274	0/0:19,0:19:29.48:0,29,247	0/0:28,0:28:28.74:0,29,308	1/1:4,13:17:27.60:327,28,0	0/0:35,0:35:71.57:0,72,444	1/1:7,11:18:28.72:335,29,0	0/0:19,0:19:9.10:0,9,123	0/0:18,0:18:51.30:0,51,258	0/0:37,0:37:78.10:0,78,477	0/0:22,0:22:57.29:0,57,280	0/0:17,0:17:48.44:0,48,248	0/0:20,0:20:57.08:0,57,288	0/0:15,0:15:40.22:0,40,226	1/1:5,14:20:46.48:475,46,0	0/0:32,0:32:88.71:0,89,478	1/1:0,13:13:39.07:387,39,0
chr10	98596092	.	G	GTCCCCTTGTTTCTA	3119.16	PASS	AB=0.667;AC=38;AF=0.950;AN=40;BaseQRankSum=-1.707;DP=48;FS=3.112;HRun=0;HaplotypeScore=25.2301;InbreedingCoeff=-0.1972;MQ=134.11;MQ0=0;MQRankSum=-1.707;QD=70.89;ReadPosRankSum=-0.279;VQSLOD=2.9484;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:18.03:269,18,0	1/1:0,0:1:3.01:115,3,0	0/1:5,1:10:17.06:1275,0,17	0/1:1,0:2:3.36:109,0,3	1/1:1,0:1:3.01:61,3,0	1/1:1,0:1:3.01:108,3,0	1/1:0,0:1:3.01:119,3,0	1/1:3,0:3:7.27:99,7,0	./.	1/1:2,0:2:6.01:138,6,0	./.	1/1:2,0:2:3.01:57,3,0	1/1:1,0:1:3.01:75,3,0	1/1:1,0:1:2.99:24,3,0	./.	./.	./.	1/1:1,0:1:3.01:42,3,0	1/1:1,0:1:3:25,3,0	1/1:1,0:1:3.01:120,3,0	1/1:3,0:3:6.02:105,6,0	./.	1/1:2,0:2:3.01:46,3,0	./.	./.	1/1:1,0:1:3:27,3,0	1/1:2,0:2:6.02:130,6,0	1/1:0,0:2:6.02:263,6,0
chr10	98597589	.	TC	T	3533.09	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.647;DP=767;FS=4.172;HRun=3;HaplotypeScore=75.4368;InbreedingCoeff=0.9855;MQ=79.08;MQ0=0;MQRankSum=-1.556;QD=35.33;ReadPosRankSum=2.237;VQSLOD=4.4546;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,43:45:99:1599,129,0	0/0:6,0:6:12.04:0,12,173	0/0:15,0:15:16.99:0,17,569	0/0:21,0:21:46.30:0,46,662	0/0:34,0:34:99:0,102,1443	0/0:20,0:20:57.19:0,57,818	0/0:26,0:26:72.24:0,72,1037	0/0:23,0:23:51.15:0,51,718	0/0:20,0:20:60.20:0,60,863	0/0:26,0:26:72.24:0,72,1023	0/0:20,0:20:60.18:0,60,843	0/0:49,0:49:99:0,147,2078	0/0:41,0:41:99:0,120,1705	0/0:31,0:31:90.29:0,90,1280	0/0:37,0:37:99:0,102,1433	1/1:1,31:32:90.28:1116,90,0	0/0:27,0:27:78.26:0,78,1116	1/1:0,23:23:66.21:818,66,0	0/0:27,0:27:75.24:0,75,1062	0/0:28,0:28:81.27:0,81,1165	0/0:52,0:52:99:0,153,2148	0/0:24,0:24:72.24:0,72,1036	0/0:27,0:27:69.21:0,69,958	0/0:22,0:22:60.20:0,60,863	0/0:22,0:22:66.22:0,66,949	0/0:27,0:27:75.25:0,75,1079	0/0:30,0:29:87.26:0,87,1214	0/0:12,0:12:36.12:0,36,518
chr10	98599460	.	GC	G	1882.71	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.292;DP=550;FS=5.008;HRun=9;HaplotypeScore=60.6114;InbreedingCoeff=0.8762;MQ=69.84;MQ0=0;MQRankSum=-0.720;QD=15.56;ReadPosRankSum=2.846;VQSLOD=3.8650;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:31:75.03:686,75,0	0/0:9,0:9:18.05:0,18,208	0/0:12,0:11:0.66:0,1,37	0/0:3,0:3:6.01:0,6,55	0/0:14,0:14:39.08:0,39,423	0/0:33,0:33:90.24:0,90,1019	0/0:30,0:30:81.23:0,81,925	1/1:4,0:18:20.37:60,20,0	0/0:25,0:25:57.14:0,57,630	0/0:24,0:24:66.19:0,66,752	0/0:11,0:11:24.05:0,24,263	0/0:32,1:33:65.78:0,66,992	0/0:20,0:20:54.15:0,54,613	0/0:21,0:21:54.14:0,54,611	0/0:22,0:22:60.18:0,60,692	1/1:0,22:22:66.04:604,66,0	0/0:34,0:34:90.21:0,90,1015	1/1:1,23:24:66.03:604,66,0	0/0:15,1:16:14.61:0,15,408	0/0:24,0:24:54.14:0,54,604	0/0:33,1:34:65.79:0,66,990	0/0:14,0:14:30.06:0,30,327	0/0:14,0:14:30.06:0,30,328	0/0:13,0:13:33.10:0,33,381	0/0:8,0:8:18.03:0,18,191	1/1:2,0:20:3.01:67,3,0	0/0:15,0:15:30.09:0,30,346	1/1:0,0:6:9.05:36,9,0
chr10	98599983	.	CCACCCA	C	878.02	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.439;DP=444;FS=1.939;HRun=0;HaplotypeScore=94.3590;InbreedingCoeff=0.8877;MQ=85.36;MQ0=7;MQRankSum=-0.333;QD=17.92;ReadPosRankSum=-2.397;VQSLOD=2.6074;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:45.15:0,45,1401	0/0:9,0:9:21.07:0,21,678	0/0:28,0:22:11.91:0,12,252	0/0:35,0:23:20.04:0,20,537	0/0:6,0:6:9.03:0,9,272	0/0:13,0:13:27.09:0,27,865	0/0:23,0:23:42.14:0,42,1293	1/1:18,8:25:24.05:366,24,0	0/0:12,0:12:27.09:0,27,842	0/0:11,0:10:15.05:0,15,464	0/0:9,0:9:12.04:0,12,324	0/0:13,0:13:27.09:0,27,825	0/0:16,0:16:24.08:0,24,730	0/0:14,0:14:33.11:0,33,1087	0/0:11,0:11:21.07:0,21,637	0/0:11,0:11:18.06:0,18,593	0/0:26,0:26:57.20:0,57,1829	0/0:16,0:16:33.11:0,33,1083	0/0:15,0:14:15.05:0,15,424	0/0:3,0:3:6.02:0,6,176	0/0:28,0:28:57.20:0,57,1844	0/0:9,0:9:21.07:0,21,665	0/0:8,0:8:21.07:0,21,690	0/0:27,0:27:57.20:0,57,1824	0/0:9,0:9:18.06:0,18,457	1/1:5,7:12:21.05:398,21,0	0/0:18,0:18:27.09:0,27,848	1/1:7,4:11:12.04:251,12,0
chr10	98605478	.	T	TTA	1768.56	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.203;DP=554;FS=0.000;HRun=0;HaplotypeScore=60.2556;InbreedingCoeff=0.9496;MQ=67.74;MQ0=0;MQRankSum=-1.596;QD=35.37;ReadPosRankSum=0.996;VQSLOD=5.7066;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:33:78.27:1288,78,0	0/0:10,0:10:30.09:0,30,370	0/0:7,0:7:9.03:0,9,112	0/0:11,0:11:10.84:0,11,108	0/0:25,0:25:72.22:0,72,905	0/0:20,0:20:48.15:0,48,611	0/0:16,0:16:45.14:0,45,572	0/0:47,0:47:99:0,126,1593	0/0:18,0:18:51.16:0,51,649	0/0:21,0:21:60.17:0,60,730	0/0:22,0:22:63.19:0,63,790	0/0:14,0:14:33.11:0,33,420	0/0:18,0:18:54.17:0,54,688	0/0:17,0:17:48.14:0,48,598	0/0:18,0:18:51.16:0,51,648	0/0:17,0:17:45.14:0,45,572	0/0:17,0:16:39.12:0,39,496	1/1:2,15:17:36.12:602,36,0	0/0:13,0:13:30.10:0,30,382	0/0:26,0:26:66.19:0,66,815	0/0:13,0:13:36.12:0,36,458	0/0:10,0:10:24.08:0,24,306	0/0:28,0:28:75.19:0,75,903	0/0:17,0:17:30.05:0,30,362	0/0:26,0:26:66.17:0,66,822	0/0:28,0:28:75.22:0,75,933	0/0:23,0:23:63.18:0,63,776	0/0:22,0:22:60.19:0,60,761
chr10	98606339	.	C	CCCATCCATGCAT	4206.31	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-2.671;DP=601;FS=8.768;HRun=0;HaplotypeScore=194.3495;InbreedingCoeff=0.7726;MQ=72.87;MQ0=1;MQRankSum=-5.429;QD=47.26;ReadPosRankSum=-5.648;VQSLOD=1.3496;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:36.09:0,36,799	0/0:8,0:8:24.07:0,24,672	0/0:30,0:24:36.78:0,37,504	0/0:27,0:23:37.31:0,37,548	0/0:23,0:23:48.11:0,48,1205	0/0:23,0:22:51.14:0,51,1337	0/0:18,0:18:33.09:0,33,825	1/1:39,0:39:93.20:1940,93,0	0/0:18,0:18:42.14:0,42,1181	0/0:14,0:14:39.02:0,39,892	0/0:8,0:8:21.03:0,21,469	0/0:33,0:33:81.24:0,81,2469	0/0:16,0:16:42.09:0,42,939	0/0:21,0:21:51.11:0,51,1315	0/0:23,0:23:51.14:0,51,1404	0/0:16,0:16:33.06:0,33,814	0/1:18,0:18:18.61:19,0,961	0/0:14,0:14:36.09:0,36,971	0/0:14,0:14:27.06:0,27,652	0/0:29,0:29:69.18:0,69,1853	0/0:44,0:44:99:0,99,2506	0/0:11,0:11:31.84:0,32,834	0/0:15,0:15:42.09:0,42,1156	0/0:24,0:24:60.13:0,60,1556	0/0:27,0:27:57.17:0,57,1629	1/1:11,10:23:48.08:2070,48,0	0/0:23,0:22:57.15:0,57,1553	1/1:1,7:9:3.01:177,3,0
chr10	98606391	.	C	CTCAT	1048.14	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.607;DP=653;FS=6.426;HRun=0;HaplotypeScore=97.7479;InbreedingCoeff=0.9613;MQ=61.98;MQ0=7;MQRankSum=0.596;QD=18.07;ReadPosRankSum=1.069;VQSLOD=2.7994;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,30:36:30.10:730,30,0	0/0:12,0:12:27.08:0,27,419	0/0:22,0:11:14.04:0,14,191	0/0:25,0:21:11.35:0,11,158	0/0:22,0:22:54.04:0,54,656	0/0:26,0:26:54.17:0,54,846	0/0:19,0:19:39.11:0,39,587	0/0:24,0:24:27.06:0,27,353	0/0:17,0:17:39.01:0,39,551	0/0:21,0:21:51.15:0,51,766	0/0:14,0:14:39.07:0,39,537	0/0:31,0:31:51.15:0,51,783	0/0:18,0:18:45.12:0,45,683	0/0:28,0:28:60.17:0,60,951	0/0:30,0:30:72.18:0,72,1050	0/0:19,0:19:48.14:0,48,736	0/0:22,0:22:42.07:0,42,604	1/1:7,14:21:18.06:438,18,0	0/0:22,0:22:29.97:0,30,388	0/0:21,0:21:36.08:0,36,494	0/0:42,0:42:81.19:0,81,1175	0/0:11,0:11:24.04:0,24,321	0/0:22,0:22:48.13:0,48,714	0/0:37,0:37:93.27:0,93,1443	0/0:24,0:25:60.14:0,60,861	0/0:32,0:32:81.02:0,81,1083	0/0:23,0:22:63.17:0,63,941	0/0:9,0:9:18.06:0,18,272
chr10	98609913	.	TG	T	3173.32	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.511;DP=657;FS=4.716;HRun=7;HaplotypeScore=72.8927;InbreedingCoeff=0.9991;MQ=71.19;MQ0=0;MQRankSum=-3.558;QD=24.60;ReadPosRankSum=1.221;VQSLOD=4.2721;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,40:41:99:1010,99,0	0/0:11,0:11:33.11:0,33,415	0/0:24,0:21:52.71:0,53,628	0/0:27,0:26:57.87:0,58,713	0/0:19,0:19:51.16:0,51,640	0/0:24,0:24:69.22:0,69,867	0/0:28,0:28:75.24:0,75,943	1/1:5,25:30:78.14:785,78,0	0/0:16,0:16:45.14:0,45,566	0/0:30,0:30:87.28:0,87,1092	0/0:22,0:22:63.19:0,63,777	0/0:24,0:24:69.18:0,69,850	0/0:15,0:15:39.11:0,39,476	0/0:17,0:17:48.15:0,48,591	0/0:29,0:29:81.26:0,81,1018	0/0:18,0:18:51.16:0,51,641	0/0:33,0:32:90.27:0,90,1116	1/1:2,18:20:51.12:520,51,0	0/0:22,0:22:57.18:0,57,716	0/0:11,0:11:30.10:0,30,376	0/0:38,0:38:99:0,105,1290	0/0:27,0:27:75.24:0,75,941	0/0:24,0:24:66.20:0,66,816	0/0:28,0:28:78.25:0,78,981	0/0:14,0:14:39.08:0,39,473	1/1:3,19:22:22.39:543,22,0	0/0:26,0:26:69.22:0,69,867	1/1:0,16:16:48.11:490,48,0
chr10	98611073	.	GCC	G	729.74	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.544;DP=405;FS=7.256;HRun=11;HaplotypeScore=56.7223;InbreedingCoeff=0.8235;MQ=79.61;MQ0=3;MQRankSum=-1.864;QD=15.53;ReadPosRankSum=2.911;VQSLOD=1.7550;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:20:42.10:447,42,0	0/0:5,0:5:12.01:0,12,155	0/0:19,0:14:6.63:0,7,141	0/0:20,0:15:31.36:0,31,321	0/0:19,0:19:26.91:0,27,342	0/0:14,0:14:24.08:0,24,366	0/0:16,0:18:44.84:0,45,600	0/0:22,0:22:20.16:0,20,318	0/0:12,0:12:36.12:0,36,553	0/0:15,0:15:30.10:0,30,456	0/0:12,0:12:24.07:0,24,335	0/0:17,0:17:30.09:0,30,430	0/0:9,0:9:18.06:0,18,272	0/0:10,0:10:21.07:0,21,318	0/0:13,0:15:41.63:0,42,606	1/1:11,0:11:11.66:70,12,0	0/0:21,0:22:60.15:0,60,848	1/1:0,16:16:33.08:351,33,0	0/0:9,0:10:20.55:0,21,269	0/0:15,1:16:4.15:0,4,411	0/0:6,0:6:12.04:0,12,179	0/0:11,0:12:17.53:0,18,210	0/0:16,0:16:32.63:0,33,438	0/0:12,0:11:27.05:0,27,383	0/0:16,0:17:32.59:0,33,426	0/0:13,0:13:11.08:0,11,149	0/0:16,0:18:50.14:0,50,699	0/0:8,0:9:3.94:0,4,143
chr10	98611083	.	CCA	C	225.06	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=4.788;DP=422;FS=4.684;HRun=0;HaplotypeScore=62.9480;InbreedingCoeff=0.2563;MQ=82.33;MQ0=4;MQRankSum=-1.360;QD=2.32;ReadPosRankSum=2.386;VQSLOD=0.9563;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:52.16:52,0,81	0/0:3,0:3:8.98:0,9,128	0/0:25,0:19:37.81:0,38,332	0/1:21,0:15:13.81:14,0,197	0/0:14,0:14:30.65:0,31,335	0/0:14,0:14:42.03:0,42,511	0/0:17,0:17:46.66:0,47,715	0/0:31,0:31:28.03:0,28,447	0/0:13,0:13:39.11:0,39,648	0/0:20,0:20:56.27:0,56,656	0/0:9,0:9:23.86:0,24,345	0/0:17,0:17:45.40:0,45,590	0/0:11,0:11:33.06:0,33,441	0/0:8,0:8:24.07:0,24,408	0/0:17,0:17:47.84:0,48,669	1/1:2,7:9:15.01:185,15,0	0/0:26,0:26:75.06:0,75,952	0/1:17,0:17:2.72:38,0,3	0/1:14,0:14:12.28:12,0,359	0/0:14,0:14:23.71:0,24,377	0/0:4,0:4:12.04:0,12,192	0/0:11,0:11:21.61:0,22,171	0/0:14,0:14:38.73:0,39,458	0/0:15,0:14:42.04:0,42,513	0/0:12,0:12:35.08:0,35,360	0/1:13,0:13:56.29:56,0,121	0/0:23,0:23:65.60:0,66,879	0/0:7,0:7:20.65:0,21,161
chr10	98611398	.	TC	T	1765.91	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.947;DP=614;FS=3.589;HRun=1;HaplotypeScore=56.9413;InbreedingCoeff=0.9948;MQ=77.25;MQ0=0;MQRankSum=-4.758;QD=35.32;ReadPosRankSum=1.540;VQSLOD=3.7573;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:81.27:1133,81,0	0/0:8,0:8:24.08:0,24,383	0/0:19,0:19:51.15:0,51,742	0/0:20,0:20:54.10:0,54,757	0/0:32,0:32:96.33:0,96,1529	0/0:23,0:23:66.23:0,66,1053	0/0:19,0:19:57.18:0,57,886	0/0:31,0:31:93.30:0,93,1437	0/0:20,0:20:60.20:0,60,957	0/0:23,0:23:69.24:0,69,1100	0/0:23,0:23:63.20:0,63,983	0/0:15,0:15:45.15:0,45,714	0/0:30,0:30:90.31:0,90,1429	0/0:18,0:18:54.18:0,54,854	0/0:22,0:22:66.21:0,66,1026	0/0:16,0:16:48.16:0,48,765	0/0:26,0:26:78.27:0,78,1241	1/1:0,19:19:54.18:755,54,0	0/0:32,0:32:96.30:0,96,1487	0/0:25,0:25:75.26:0,75,1197	0/0:23,0:23:69.18:0,69,1073	0/0:21,0:21:63.21:0,63,1003	0/0:22,0:22:66.23:0,66,1053	0/0:21,0:21:63.17:0,63,973	0/0:26,0:26:78.27:0,78,1238	0/0:24,0:24:68.97:0,69,1101	0/0:19,0:17:54.12:0,54,809	0/0:6,0:6:18.06:0,18,287
chr10	98612677	.	CACACACACAA	C	806.49	PASS	AB=0.898;AC=4;AF=0.071;AN=56;BaseQRankSum=6.286;DP=628;FS=7.161;HRun=0;HaplotypeScore=180.5011;InbreedingCoeff=-0.0151;MQ=65.65;MQ0=7;MQRankSum=-5.824;QD=9.06;ReadPosRankSum=-0.604;VQSLOD=2.0610;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:46,0:46:99:180,0,372	0/0:6,0:6:15.04:0,15,479	0/0:24,0:14:8.61:0,9,190	0/0:32,0:18:26.97:0,27,204	0/0:15,0:15:32.77:0,33,845	0/0:15,0:15:39.07:0,39,899	0/0:23,0:22:47.94:0,48,748	0/0:23,0:23:53.94:0,54,574	0/0:31,0:31:56.99:0,57,840	0/0:27,0:26:56.11:0,56,1691	0/0:11,0:11:19.24:0,19,377	0/0:23,0:22:57.07:0,57,1652	0/0:20,0:20:53.68:0,54,1352	0/0:27,0:27:52.58:0,53,1285	0/0:23,0:23:54.14:0,54,1827	0/1:4,9:13:8.96:268,0,9	0/0:29,0:29:50.66:0,51,721	0/1:24,0:24:99:458,0,166	0/0:16,0:16:29.79:0,30,579	0/0:22,0:22:51.02:0,51,1767	0/0:25,0:24:53.66:0,54,1327	0/0:15,0:15:39:0,39,1169	0/0:12,0:12:23.97:0,24,797	0/0:45,0:44:99:0,120,3681	0/0:25,0:25:72.06:0,72,2072	0/0:26,0:26:55.27:0,55,714	0/0:24,0:23:49.45:0,49,1561	0/1:6,0:6:3.40:3,0,185
chr10	98612687	.	AAC	A	588.91	PASS	AB=0.881;AC=21;AF=0.404;AN=52;BaseQRankSum=8.382;DP=612;FS=1.275;HRun=0;HaplotypeScore=95.1991;InbreedingCoeff=-0.1950;MQ=58.73;MQ0=15;MQRankSum=-1.985;QD=1.53;ReadPosRankSum=2.075;VQSLOD=1.8816;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:40:14.46:44,0,14	0/0:6,0:6:8.82:0,9,102	./.	./.	0/0:18,0:18:2.73:0,3,202	0/1:14,0:14:1.65:2,0,187	1/1:18,4:21:5.58:45,6,0	1/1:23,0:21:1.40:4,1,0	0/0:19,0:33:2.63:0,3,71	0/1:16,7:22:99:125,0,189	0/0:9,0:9:3.01:0,3,36	0/1:20,2:21:38.14:38,0,336	0/1:18,1:19:19.81:20,0,230	0/0:27,0:26:2.89:0,3,186	0/0:22,0:23:25:0,25,515	0/1:12,0:12:23.72:24,0,34	1/1:12,0:25:20.46:103,20,0	0/1:11,0:25:4.47:86,0,4	0/1:13,0:12:14.32:14,0,98	0/1:17,0:17:9.43:9,0,346	0/0:26,0:23:20.23:0,20,255	0/1:18,3:21:43.67:44,0,230	0/0:11,0:11:17.96:0,18,222	0/1:46,4:49:86.21:86,0,717	0/0:25,1:26:0.03:0,0,341	0/1:13,0:27:56:56,0,67	0/1:25,0:24:21.61:22,0,288	1/1:4,0:6:2.84:14,3,0
chr10	98612894	.	T	TAC	897.99	PASS	AB=0.979;AC=21;AF=0.457;AN=46;BaseQRankSum=-2.572;DP=508;FS=4.530;HRun=0;HaplotypeScore=92.8033;InbreedingCoeff=0.0812;MQ=66.61;MQ0=7;MQRankSum=0.756;QD=3.35;ReadPosRankSum=-2.062;VQSLOD=1.8987;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:14.82:0,15,159	0/1:10,0:11:0.24:0,0,9	./.	./.	0/0:18,0:19:5.78:0,6,46	1/1:18,1:18:14.32:117,14,0	1/1:21,3:24:4.57:49,5,0	./.	0/1:10,1:11:34.11:35,0,34	1/1:13,0:12:0.47:1,0,0	0/1:9,0:9:21.29:21,0,44	0/1:15,0:14:9.29:107,0,9	1/1:11,0:11:0.47:1,0,0	1/1:9,2:14:2.49:43,2,0	0/1:15,0:15:47.20:76,0,47	0/1:7,0:12:13.32:13,0,29	1/1:27,0:26:12.96:275,13,0	0/0:24,0:24:21.20:0,21,218	0/0:10,0:10:5.97:0,6,52	0/0:13,0:13:5.84:0,6,44	0/1:33,0:33:23.04:35,0,23	./.	0/1:18,0:19:0.32:63,0,0	0/1:30,4:34:9.42:201,0,9	./.	0/0:13,0:16:2.52:0,3,14	0/0:16,0:17:5.74:0,6,30	0/0:4,0:8:11.36:0,11,56
chr10	98613027	.	TC	T	1891.44	PASS	AB=0.892;AC=36;AF=0.643;AN=56;BaseQRankSum=3.111;DP=364;FS=13.658;HRun=12;HaplotypeScore=45.7078;InbreedingCoeff=0.5106;MQ=85.95;MQ0=1;MQRankSum=-2.121;QD=7.11;ReadPosRankSum=3.455;VQSLOD=0.5857;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,1:14:2.96:23,3,0	0/1:5,0:5:5.09:5,0,47	0/1:26,0:21:1.58:2,0,171	0/0:16,0:12:1.37:0,1,21	0/0:10,0:10:5.98:0,6,48	1/1:4,7:11:14.94:116,15,0	1/1:10,18:30:45.86:337,46,0	0/0:9,0:9:6.01:0,6,61	1/1:1,7:8:5.97:46,6,0	0/0:13,1:14:15.02:0,15,147	0/0:11,0:11:5.84:0,6,40	1/1:8,5:13:8.91:70,9,0	1/1:3,0:3:5.92:40,6,0	1/1:1,3:4:5.97:46,6,0	0/1:6,8:14:9.57:118,0,10	1/1:5,3:9:10.99:73,11,0	1/1:6,16:25:41.94:296,42,0	0/0:22,0:22:12.92:0,13,284	1/1:4,6:9:14.91:116,15,0	1/1:7,7:14:17.82:133,18,0	1/1:5,6:11:8.96:70,9,0	1/1:3,6:10:10.99:76,11,0	1/1:5,4:10:4.72:28,5,0	1/1:4,11:15:23.44:185,23,0	0/0:7,0:7:3:0,3,26	0/1:13,1:14:11.20:11,0,73	1/1:5,15:20:35.83:279,36,0	0/0:8,0:8:9:0,9,79
chr10	98613408	.	A	AGG	642.80	PASS	AB=0.667;AC=9;AF=0.161;AN=56;BaseQRankSum=5.608;DP=605;FS=3.314;HRun=9;HaplotypeScore=88.5099;InbreedingCoeff=0.7672;MQ=79.74;MQ0=0;MQRankSum=0.840;QD=7.22;ReadPosRankSum=-1.919;VQSLOD=-0.0663;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:30:49.78:170,50,0	0/0:11,0:11:23.77:0,24,235	0/0:23,0:20:45.06:0,45,459	0/0:34,0:30:24.73:0,25,576	0/0:19,0:19:54.08:0,54,550	0/0:21,0:21:54.14:0,54,575	0/0:27,0:27:57.09:0,57,607	1/1:7,11:18:26.88:246,27,0	0/0:26,0:26:63.08:0,63,649	0/0:22,0:21:60.14:0,60,633	0/0:13,0:13:36.09:0,36,382	0/0:21,0:21:57.12:0,57,606	0/0:22,0:23:65.87:0,66,666	0/0:25,0:26:71.87:0,72,734	0/0:25,0:25:66.12:0,66,698	0/0:21,0:21:60.15:0,60,638	0/0:22,0:23:62.89:0,63,650	1/1:3,0:18:4.04:93,4,0	0/0:18,0:18:36.05:0,36,376	0/0:20,0:20:42.05:0,42,438	0/0:26,0:26:57.10:0,57,591	0/0:26,0:26:57.09:0,57,589	0/0:18,0:18:42.08:0,42,447	0/0:35,0:37:89.66:0,90,909	0/0:12,0:12:5.36:0,5,233	0/1:9,7:18:36.60:192,0,37	0/0:24,0:24:56.85:0,57,578	1/1:1,4:5:6.02:92,6,0
chr10	98614149	.	ACC	A	3643.28	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.251;DP=518;FS=12.456;HRun=9;HaplotypeScore=72.7943;InbreedingCoeff=0.9938;MQ=76.71;MQ0=1;MQRankSum=-0.237;QD=28.46;ReadPosRankSum=1.054;VQSLOD=2.3175;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,32:36:78.23:909,78,0	0/0:5,0:5:15.03:0,15,199	0/0:27,0:25:55.96:0,56,665	0/0:29,0:28:48.28:0,48,570	0/0:10,0:11:26.58:0,27,403	0/0:10,0:9:24.08:0,24,393	0/0:29,0:30:68.66:0,69,971	1/1:5,22:27:63.13:709,63,0	0/0:17,0:17:48.15:0,48,758	0/0:20,0:20:54.64:0,55,825	0/0:9,0:9:27.09:0,27,443	0/0:13,0:13:36.10:0,36,562	0/0:11,0:11:33.09:0,33,486	0/0:21,0:21:60.10:0,60,877	0/0:11,0:11:30.08:0,30,446	0/0:20,0:19:53.70:0,54,448	0/0:30,0:30:78.22:0,78,1182	1/1:1,22:22:60.18:698,60,0	0/0:14,0:14:39.08:0,39,566	0/0:16,0:16:45.15:0,45,738	0/0:19,0:20:50.03:0,50,624	0/0:13,0:13:33.08:0,33,472	0/0:9,0:9:27.08:0,27,420	0/0:24,0:24:66.10:0,66,911	0/0:14,0:14:39.09:0,39,608	1/1:1,31:32:93.28:1084,93,0	0/0:15,0:15:45.13:0,45,690	1/1:3,7:10:21.06:245,21,0
chr10	98614158	.	CA	C	527.79	PASS	AB=0.568;AC=1;AF=0.018;AN=56;BaseQRankSum=1.191;DP=527;FS=6.813;HRun=1;HaplotypeScore=74.4365;InbreedingCoeff=-0.0163;MQ=71.15;MQ0=1;MQRankSum=1.150;QD=25.13;ReadPosRankSum=-0.233;VQSLOD=3.0282;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:82.85:0,83,448	0/0:4,0:4:9.02:0,9,126	0/0:26,0:24:45.14:0,45,597	0/0:31,0:29:64.97:0,65,695	0/0:12,0:12:25.49:0,25,355	0/0:9,0:8:27.08:0,27,355	0/0:27,0:27:64.57:0,65,831	0/0:28,0:28:79.71:0,80,542	0/0:17,0:17:48.14:0,48,637	0/0:20,0:20:57.62:0,58,736	0/0:12,0:12:33.08:0,33,426	0/0:11,0:11:33.11:0,33,458	0/0:13,0:13:36.06:0,36,447	0/0:26,0:26:72.04:0,72,854	0/0:10,0:10:27.05:0,27,357	0/1:5,16:20:26.11:602,0,26	0/0:27,0:27:75.13:0,75,984	0/0:25,0:24:65.95:0,66,362	0/0:15,0:15:45.07:0,45,542	0/0:19,0:19:51.14:0,51,677	0/0:16,0:16:28.31:0,28,452	0/0:13,0:13:39.03:0,39,454	0/0:11,0:11:26.94:0,27,350	0/0:24,0:24:57.09:0,57,725	0/0:15,0:15:45.11:0,45,577	0/0:33,0:33:96.68:0,97,602	0/0:17,0:17:50.99:0,51,633	0/0:7,0:7:20.05:0,20,104
chr10	98614695	.	CCA	C	500.04	PASS	AB=0.918;AC=17;AF=0.327;AN=52;BaseQRankSum=4.808;DP=658;FS=9.323;HRun=0;HaplotypeScore=79.5601;InbreedingCoeff=-0.1775;MQ=64.84;MQ0=20;MQRankSum=-1.102;QD=1.76;ReadPosRankSum=1.087;VQSLOD=0.4618;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:49:21.47:0,21,200	0/0:13,0:13:6.02:0,6,84	./.	./.	0/1:19,3:21:38.82:39,0,267	0/1:17,3:22:26.04:26,0,165	0/1:25,2:26:66.11:66,0,178	0/0:35,0:33:0.89:0,1,2	0/1:17,3:20:88.72:89,0,154	0/1:14,0:15:7.55:8,0,148	0/1:13,2:15:20.91:21,0,121	0/0:22,0:23:18.45:0,18,400	0/1:24,0:24:0.28:0,0,338	0/1:20,0:21:35.86:36,0,245	0/0:27,0:25:0.17:0,0,409	1/1:13,0:17:29.78:158,30,0	0/0:23,5:27:3.17:0,3,443	0/0:14,0:26:21.88:0,22,185	0/1:18,0:17:16.89:17,0,56	0/0:22,0:22:15.05:0,15,208	0/0:29,0:28:35.79:0,36,489	0/0:23,0:23:12.04:0,12,173	0/1:12,0:12:14.62:15,0,198	0/0:33,1:33:24.21:0,24,707	0/1:15,7:22:47.85:48,0,142	0/1:18,3:21:53.40:53,0,56	0/1:20,1:21:8.92:9,0,256	1/1:4,2:6:6.02:66,6,0
chr10	98615735	.	GA	G	2921.68	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.723;DP=678;FS=6.793;HRun=9;HaplotypeScore=76.8577;InbreedingCoeff=0.9989;MQ=76.11;MQ0=4;MQRankSum=1.764;QD=21.64;ReadPosRankSum=1.376;VQSLOD=4.4249;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,35:37:93.05:851,93,0	0/0:8,0:8:21.06:0,21,242	0/0:38,0:33:68.32:0,68,687	0/0:36,0:28:35.61:0,36,337	0/0:28,0:28:72.21:0,72,828	0/0:24,0:24:36.37:0,36,664	0/0:20,0:20:60.17:0,60,681	1/1:6,27:32:78.04:713,78,0	0/0:22,0:22:60.18:0,60,690	0/0:28,0:28:75.22:0,75,865	0/0:21,0:21:60.18:0,60,688	0/0:21,0:21:60.18:0,60,689	0/0:11,0:11:30.06:0,30,328	0/0:24,0:24:66.15:0,66,730	0/0:18,0:18:45.13:0,45,519	0/0:20,0:20:57.17:0,57,655	0/0:26,0:26:69.16:0,69,771	1/1:3,19:21:51.03:467,51,0	0/0:25,0:25:72.21:0,72,827	0/0:25,0:24:66.18:0,66,749	0/0:26,0:26:69.20:0,69,792	0/0:27,0:27:75.22:0,75,862	0/0:17,0:17:45.13:0,45,519	0/0:25,0:25:75.22:0,75,866	0/0:27,0:27:69.21:0,69,796	1/1:3,23:25:66.02:599,66,0	0/0:25,0:25:66.18:0,66,750	1/1:0,17:17:51.03:467,51,0
chr10	98616003	.	A	AGT	5997.96	PASS	AB=0.795;AC=11;AF=0.196;AN=56;BaseQRankSum=4.060;DP=1080;FS=8.154;HRun=0;HaplotypeScore=171.4670;InbreedingCoeff=0.8865;MQ=55.43;MQ0=19;MQRankSum=-3.904;QD=21.35;ReadPosRankSum=-0.867;VQSLOD=4.7657;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:50:49.82:400,50,0	0/0:12,0:12:29.80:0,30,373	0/0:24,0:6:11.91:0,12,104	0/0:53,0:18:23.54:0,24,245	0/0:33,0:32:78.25:0,78,1000	0/0:23,0:23:36.75:0,37,609	0/0:35,0:35:78.25:0,78,1011	0/1:46,16:55:12.34:910,0,12	0/0:45,0:45:99:0,99,1269	0/0:41,0:41:99:0,108,1389	0/0:16,0:16:45.11:0,45,544	0/0:46,0:46:99:0,111,1421	0/0:34,0:34:84.24:0,84,1051	0/0:34,0:34:78.18:0,78,937	0/0:42,0:42:99:0,105,1301	1/1:13,23:37:69.12:1117,69,0	0/0:40,0:41:67.68:0,68,1203	1/1:21,0:35:56.92:492,57,0	0/0:28,0:18:36.11:0,36,455	0/0:25,0:25:66.06:0,66,793	0/0:115,0:114:99:0,291,3675	0/0:23,0:23:59.99:0,60,720	0/0:17,0:17:45.13:0,45,569	0/0:56,0:54:99:0,132,1713	0/0:27,0:27:63.19:0,63,802	1/1:37,30:66:91.05:1958,91,0	0/0:27,0:26:66.03:0,66,817	1/1:14,14:28:73.33:1120,73,0
chr10	98616071	.	A	AGT	5246.77	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-7.540;DP=1152;FS=9.846;HRun=0;HaplotypeScore=156.5226;InbreedingCoeff=0.9483;MQ=53.36;MQ0=30;MQRankSum=-2.053;QD=25.97;ReadPosRankSum=-0.769;VQSLOD=5.1980;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,23:35:50.46:845,50,0	0/0:11,0:11:33.08:0,33,393	0/0:53,0:8:8.90:0,9,94	0/0:52,0:8:9.65:0,10,86	0/0:33,0:32:84.25:0,84,1047	0/0:18,0:18:45.14:0,45,572	0/0:37,0:37:73.66:0,74,1096	1/1:30,29:44:5.88:1069,6,0	0/0:44,0:44:99:0,105,1306	0/0:46,0:46:99:0,117,1468	0/0:22,0:22:57.17:0,57,711	0/0:40,0:40:77.26:0,77,1242	0/0:45,0:45:99:0,108,1321	0/0:47,0:47:99:0,103,1420	0/0:43,0:43:99:0,111,1347	0/0:57,0:56:99:0,108,1305	0/0:44,0:44:89.86:0,90,1331	1/1:9,29:39:21.51:1089,22,0	0/0:37,0:26:57.51:0,58,658	0/0:31,0:31:75.20:0,75,903	0/0:123,0:121:99:0,271,3272	0/0:32,0:32:87.26:0,87,1092	0/0:22,0:22:63.18:0,63,773	0/0:49,0:49:95.85:0,96,1182	0/0:28,0:28:69.04:0,69,835	1/1:19,28:42:99:1547,99,0	0/0:32,0:32:81.26:0,81,1025	1/1:2,18:20:45.13:696,45,0
chr10	98616159	.	AGT	A	2437.82	PASS	AB=0.860;AC=12;AF=0.214;AN=56;BaseQRankSum=11.107;DP=1133;FS=4.302;HRun=0;HaplotypeScore=176.3573;InbreedingCoeff=0.7146;MQ=52.47;MQ0=34;MQRankSum=-0.079;QD=9.30;ReadPosRankSum=-2.347;VQSLOD=2.7590;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,28:51:96.62:1176,97,0	0/0:14,0:14:33.10:0,33,504	0/0:16,0:5:5.96:0,6,49	0/0:39,0:6:5.99:0,6,71	0/0:30,1:31:31.32:0,31,957	0/0:20,0:20:48.16:0,48,781	0/0:51,0:51:99:0,111,1744	1/1:46,0:38:4.99:163,5,0	0/0:46,0:46:99:0,111,1823	0/0:56,1:50:79.90:0,80,1703	0/0:21,0:21:13.59:0,14,711	0/0:50,0:49:99:0,122,1967	0/0:42,0:42:99:0,116,1744	0/0:42,0:42:55.45:0,55,1389	0/0:42,1:43:61.46:0,61,1484	0/1:33,16:48:99:271,0,451	0/0:45,0:45:99:0,111,1795	1/1:21,11:28:34.41:643,34,0	0/1:27,1:9:16.81:17,0,249	0/0:33,0:33:74.73:0,75,1180	0/0:132,1:129:99:0,228,4639	0/0:51,0:49:99:0,124,1950	0/0:31,0:31:63.22:0,63,1029	0/0:53,2:53:59.90:0,60,1949	0/0:22,0:21:51.09:0,51,791	1/1:14,0:31:48.06:284,48,0	0/0:29,0:29:77.24:0,77,1159	1/1:3,0:7:13.16:58,13,0
chr10	98616183	.	AGT	A	177.29	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.144;DP=1173;FS=3.127;HRun=0;HaplotypeScore=188.5676;InbreedingCoeff=0.8568;MQ=53.56;MQ0=34;MQRankSum=-2.371;QD=4.22;ReadPosRankSum=-0.492;VQSLOD=3.1190;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,103,1635	0/0:15,0:15:36.84:0,37,559	0/0:33,0:4:8.01:0,8,69	0/0:66,1:8:6.91:0,7,102	0/0:31,0:31:78.22:0,78,1183	0/0:20,0:20:45.07:0,45,711	0/0:51,0:50:95.96:0,96,1524	0/0:41,3:33:30.75:0,31,945	0/0:51,1:51:99:0,122,2234	0/0:53,0:48:99:0,123,1932	0/0:27,0:27:69.22:0,69,1120	0/0:52,0:51:99:0,123,1936	0/0:39,0:39:99:0,111,1753	0/0:32,1:33:38.69:0,39,1135	0/0:49,0:49:93.79:0,94,2010	1/1:18,24:41:29.21:272,29,0	0/0:48,0:48:74.36:0,74,1747	0/0:33,0:29:37.34:0,37,849	0/0:26,0:11:30.07:0,30,442	0/0:37,0:37:99:0,102,1640	0/0:136,0:134:99:0,337,5338	0/0:49,0:48:99:0,111,1821	0/0:32,0:31:75.26:0,75,1229	0/0:57,0:55:99:0,147,2362	0/0:23,1:24:30.65:0,31,980	0/0:38,0:34:52.48:0,52,1211	0/0:28,0:28:63.03:0,63,972	0/0:7,0:7:21.07:0,21,337
chr10	98616194	.	GTC	G	205.21	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.486;DP=1195;FS=3.207;HRun=0;HaplotypeScore=189.6725;InbreedingCoeff=0.8453;MQ=53.48;MQ0=48;MQRankSum=-0.836;QD=4.89;ReadPosRankSum=-2.529;VQSLOD=2.5046;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:54:99:0,120,1978	0/0:17,0:17:20.11:0,20,566	0/0:41,0:2:5.62:0,6,27	0/0:67,0:7:10.34:0,10,123	0/0:29,0:29:77.46:0,77,1196	0/0:18,0:18:45.91:0,46,755	0/0:46,0:45:96.40:0,96,1706	0/0:44,0:31:65.33:0,65,1158	0/0:56,0:55:99:0,151,2587	0/0:57,0:52:99:0,129,2191	0/0:25,0:25:72.15:0,72,1260	0/0:51,0:51:99:0,134,2090	0/0:39,0:39:99:0,114,1892	0/0:29,0:29:61.06:0,61,1281	0/0:53,0:53:99:0,123,2186	1/1:34,8:42:16.21:294,16,0	0/0:45,0:44:88.08:0,88,2010	0/0:30,0:26:39.72:0,40,949	0/0:26,0:14:36.52:0,37,538	0/0:37,0:37:72.34:0,72,1707	0/0:143,0:141:99:0,366,5819	0/0:45,0:44:99:0,107,1887	0/0:32,0:31:84.17:0,84,1348	0/0:65,0:63:99:0,168,2770	0/0:29,0:29:40.54:0,41,1073	0/0:42,0:38:82.96:0,83,1471	0/0:26,0:26:68.53:0,69,1200	0/0:7,0:7:21.07:0,21,390
chr10	98616231	.	A	AGT	7040.09	PASS	AB=0.977;AC=11;AF=0.196;AN=56;BaseQRankSum=-2.997;DP=1119;FS=7.484;HRun=0;HaplotypeScore=167.7096;InbreedingCoeff=0.9357;MQ=54.84;MQ0=40;MQRankSum=-1.004;QD=28.97;ReadPosRankSum=-3.762;VQSLOD=4.7069;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,33:54:99:1963,124,0	0/0:17,0:17:45.09:0,45,569	0/0:31,0:9:18.03:0,18,206	0/1:39,0:12:0.46:0,0,171	0/0:26,0:26:66.19:0,66,841	0/0:17,0:17:45.06:0,45,533	0/0:45,0:44:90.55:0,91,1412	1/1:11,32:40:99:1411,99,0	0/0:50,0:50:99:0,132,1662	0/0:45,0:43:99:0,117,1486	0/0:31,0:31:87.26:0,87,1102	0/0:45,0:45:99:0,114,1464	0/0:37,0:37:87.77:0,88,1120	0/0:29,0:29:71.32:0,71,878	0/0:56,0:56:99:0,138,1742	0/0:30,0:30:20.66:0,21,262	0/0:34,0:33:64.90:0,65,1019	1/1:18,20:34:53.47:1222,53,0	0/0:31,0:17:44.70:0,45,581	0/0:37,0:37:87.19:0,87,1219	0/0:142,0:141:99:0,358,4556	0/0:39,0:39:99:0,99,1284	0/0:27,0:26:66.14:0,66,798	0/0:52,0:51:99:0,126,1616	0/0:31,0:31:82.84:0,83,989	1/1:6,40:45:81.35:1832,81,0	0/0:24,0:24:66.17:0,66,809	1/1:8,6:14:39.13:611,39,0
chr10	98616248	.	GTA	G	162.40	PASS	AB=0.600;AC=1;AF=0.018;AN=56;BaseQRankSum=5.866;DP=1102;FS=4.771;HRun=0;HaplotypeScore=184.0304;InbreedingCoeff=-0.0174;MQ=57.10;MQ0=19;MQRankSum=-4.440;QD=6.01;ReadPosRankSum=-2.949;VQSLOD=2.8769;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:53:99:0,130,2421	0/0:18,0:18:48.14:0,48,881	0/0:42,0:20:60.14:0,60,977	0/0:33,0:18:48.62:0,49,794	0/0:27,0:27:78.20:0,78,1397	0/0:21,0:21:63.17:0,63,1113	0/0:49,0:49:99:0,136,2352	0/0:44,0:42:99:0,123,2118	0/0:46,0:46:99:0,138,2552	0/0:43,0:42:99:0,126,2248	0/0:31,0:31:90.25:0,90,1641	0/0:41,0:41:99:0,120,2166	0/0:32,0:32:96.31:0,96,1770	0/0:25,0:25:62.78:0,63,1199	0/0:59,0:59:99:0,165,2923	0/1:9,18:27:34.17:237,0,34	0/0:33,0:33:88.55:0,89,1657	0/0:33,1:31:59.92:0,60,1501	0/0:27,0:23:64.11:0,64,1055	0/0:40,0:40:99:0,117,2013	0/0:144,0:143:99:0,396,7167	0/0:38,0:38:99:0,111,1951	0/0:25,0:25:72.19:0,72,1247	0/0:45,0:45:99:0,126,2290	0/0:30,0:30:87.29:0,87,1677	0/0:50,0:48:99:0,141,2579	0/0:31,0:31:93.21:0,93,1585	0/0:13,0:13:39.13:0,39,726
chr10	98616277	.	TGA	T	47.35	PASS	AB=0.679;AC=1;AF=0.018;AN=56;BaseQRankSum=5.940;DP=1056;FS=2.545;HRun=0;HaplotypeScore=165.9343;InbreedingCoeff=-0.0182;MQ=56.14;MQ0=10;MQRankSum=-4.617;QD=2.49;ReadPosRankSum=-3.094;VQSLOD=2.3794;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:99:0,123,2221	0/0:11,0:11:31.90:0,32,549	0/0:43,0:19:51.52:0,52,806	0/0:43,1:19:35.96:0,36,655	0/0:26,0:25:75.15:0,75,1265	0/0:22,0:22:60.19:0,60,1123	0/0:48,0:48:99:0,132,2359	0/0:50,0:50:99:0,144,2328	0/0:44,0:44:99:0,132,2462	0/0:41,0:41:90.01:0,90,2024	0/0:22,0:22:60.15:0,60,1027	0/0:45,0:45:99:0,116,2053	0/0:38,0:38:99:0,111,2140	0/0:26,0:26:63.66:0,64,1094	0/0:47,0:47:99:0,138,2534	0/1:10,9:18:65.89:122,0,66	0/0:31,0:31:82.98:0,83,1566	0/0:40,0:38:90.68:0,91,1855	0/0:23,0:22:63.17:0,63,1119	0/0:33,0:33:96.30:0,96,1747	0/0:129,0:127:99:0,337,6539	0/0:29,0:29:87.25:0,87,1559	0/0:33,0:33:93.29:0,93,1672	0/0:44,0:44:99:0,129,2286	0/0:32,0:32:89.82:0,90,1526	0/0:45,0:44:99:0,123,2146	0/0:26,0:26:77.74:0,78,1420	0/0:15,0:15:42.14:0,42,809
chr10	98616347	.	A	AGT	4012.97	PASS	AB=0.581;AC=11;AF=0.196;AN=56;BaseQRankSum=-4.280;DP=986;FS=0.000;HRun=0;HaplotypeScore=128.4784;InbreedingCoeff=0.7706;MQ=55.52;MQ0=20;MQRankSum=-1.741;QD=19.77;ReadPosRankSum=-0.821;VQSLOD=3.7657;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,40:58:81.26:1258,81,0	0/0:15,0:16:38.95:0,39,443	0/0:47,0:8:2.94:0,3,35	0/0:43,0:13:1.66:0,2,7	0/0:32,0:30:75.17:0,75,856	0/0:23,0:26:65.81:0,66,697	0/0:26,0:26:47.91:0,48,501	1/1:17,16:34:18.38:723,18,0	0/0:38,0:38:81.25:0,81,965	0/0:53,0:52:99:0,112,1338	0/0:23,0:23:60.14:0,60,680	0/0:42,0:42:99:0,99,1151	0/0:43,0:44:84.09:0,84,976	0/0:26,0:29:62.69:0,63,685	0/0:37,0:39:98.90:0,99,1097	1/1:8,3:38:53.53:516,54,0	0/0:31,0:31:47.24:0,47,625	1/1:18,14:32:23.68:746,24,0	0/0:19,0:14:26.69:0,27,268	0/0:18,0:21:47.81:0,48,528	0/0:88,0:88:99:0,143,1748	0/0:23,1:25:11.77:0,12,553	0/0:46,0:46:99:0,105,1204	0/0:36,0:37:74.41:0,74,833	0/0:25,0:26:54.05:0,54,632	0/1:7,17:25:43.49:723,0,43	0/0:26,0:26:69.21:0,69,822	1/1:5,6:13:3.01:48,3,0
chr10	98617620	.	T	TA	1172	PASS	AB=0.905;AC=15;AF=0.268;AN=56;BaseQRankSum=-2.414;DP=513;FS=1.044;HRun=12;HaplotypeScore=58.2107;InbreedingCoeff=0.5271;MQ=63.93;MQ0=0;MQRankSum=-0.024;QD=6.77;ReadPosRankSum=-2.657;VQSLOD=1.4403;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:19:22.84:120,23,0	0/1:9,1:10:5.33:5,0,128	0/1:6,0:3:0.37:21,0,0	0/1:6,0:6:0:0,0,0	0/0:36,1:40:39.34:0,39,560	0/0:29,0:29:59.56:0,60,434	0/0:13,0:13:29.79:0,30,218	1/1:10,19:29:57.08:549,57,0	0/0:16,0:16:44.73:0,45,328	0/0:21,0:21:47.69:0,48,350	0/1:12,1:14:15.52:16,0,187	0/0:10,0:13:25.85:0,26,181	0/0:16,0:17:40.76:0,41,287	0/0:15,0:16:40.79:0,41,288	0/1:19,3:23:5.62:6,0,279	0/0:16,0:17:40.81:0,41,290	0/0:19,0:19:38.73:0,39,283	1/1:3,0:12:17.04:86,17,0	0/0:18,0:19:40.79:0,41,290	0/0:20,0:20:50.63:0,51,368	0/1:19,0:19:5.45:5,0,271	0/0:17,0:18:35.67:0,36,256	0/0:22,1:23:5.55:0,6,194	0/0:7,0:7:14.88:0,15,109	0/0:30,0:30:74.55:0,75,546	0/1:9,16:26:5.21:388,0,5	0/0:22,0:21:52.92:0,53,390	1/1:3,5:8:15.02:146,15,0
chr10	98618181	.	T	TA	927.78	PASS	AB=0.571;AC=5;AF=0.089;AN=56;BaseQRankSum=-2.030;DP=639;FS=1.151;HRun=12;HaplotypeScore=81.6465;InbreedingCoeff=0.8164;MQ=75.62;MQ0=0;MQRankSum=-1.290;QD=12.21;ReadPosRankSum=0.886;VQSLOD=3.7002;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,34:43:56.20:701,56,0	0/0:6,0:6:14.91:0,15,109	0/0:35,0:26:31.42:0,31,191	0/0:21,0:15:7.31:0,7,56	0/0:27,0:27:52.58:0,53,378	0/0:21,0:21:50.65:0,51,369	0/0:24,0:25:64.51:0,65,454	0/0:26,1:27:21.40:0,21,315	0/0:18,0:18:44.73:0,45,327	0/0:31,0:31:76.82:0,77,555	0/0:24,2:26:27.45:0,27,364	0/0:25,0:25:59.52:0,60,418	0/0:23,0:25:49.66:0,50,348	0/0:16,1:18:20.59:0,21,305	0/0:25,0:25:50.67:0,51,371	1/1:5,0:21:39.83:202,40,0	0/0:35,0:35:83.37:0,83,604	0/1:3,9:12:0.87:154,0,1	0/0:23,0:22:41.65:0,42,302	0/0:15,1:17:11.53:0,12,233	0/0:7,0:10:23.98:0,24,149	0/0:21,0:21:46.69:0,47,334	0/0:29,1:31:45.27:0,45,453	0/0:22,0:22:59.61:0,60,434	0/0:17,0:17:35.72:0,36,263	0/0:18,0:20:48.45:0,48,330	0/0:31,0:32:55.57:0,56,395	0/0:2,0:3:7.98:0,8,47
chr10	98618642	.	GGACCTC	G	490.39	PASS	AB=0.750;AC=3;AF=0.054;AN=56;BaseQRankSum=7.260;DP=539;FS=7.600;HRun=0;HaplotypeScore=117.3332;InbreedingCoeff=-0.0590;MQ=79.06;MQ0=0;MQRankSum=-3.852;QD=7.66;ReadPosRankSum=-2.822;VQSLOD=1.2423;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:48.62:49,0,486	0/0:10,0:10:30.10:0,30,1092	0/0:20,0:20:60.21:0,60,2225	0/0:20,0:20:60.07:0,60,1575	0/0:21,0:21:60.19:0,60,2139	0/0:16,0:16:48.16:0,48,1722	0/0:34,0:34:99:0,102,3728	0/1:15,13:28:99:272,0,1083	0/0:25,0:25:75.26:0,75,2746	0/0:25,0:25:75.24:0,75,2737	0/0:18,0:18:51.18:0,51,1830	0/0:19,0:19:57.18:0,57,2014	0/0:22,0:22:66.23:0,66,2483	0/0:15,0:15:45.15:0,45,1646	0/0:19,0:19:57.20:0,57,2149	0/0:11,0:11:24.07:0,24,447	0/0:30,0:30:87.30:0,87,3247	0/0:11,0:11:27.03:0,27,577	0/0:19,0:18:51.18:0,51,1910	0/0:13,0:13:33.11:0,33,1194	0/0:34,0:33:99:0,102,3810	0/0:9,0:9:27.09:0,27,1016	0/0:11,0:11:33.11:0,33,1181	0/0:21,0:21:63.22:0,63,2343	0/0:20,0:20:57.20:0,57,2074	0/1:5,16:21:99:269,0,337	0/0:28,0:28:84.25:0,84,3027	0/0:4,0:4:8.99:0,9,238
chr10	98618648	.	C	CAGATTCACTGTCAGCAGGACAGTGAATCTG	17370.48	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=8.871;DP=566;FS=7.772;HRun=0;HaplotypeScore=387.8104;InbreedingCoeff=0.8716;MQ=78.64;MQ0=0;MQRankSum=-11.792;QD=143.56;ReadPosRankSum=-1.701;VQSLOD=2.8985;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:66.20:4963,66,0	0/0:11,0:11:30.10:0,30,1770	0/0:21,0:21:54.17:0,54,2370	0/0:17,0:17:37.66:0,38,1611	0/0:21,0:21:63.20:0,63,4222	0/0:16,0:16:48.15:0,48,3262	0/0:33,0:33:96.33:0,96,6133	1/1:27,0:27:63.22:3431,63,0	0/0:24,0:24:72.25:0,72,4281	0/0:25,0:25:66.22:0,66,4076	0/0:18,0:18:51.16:0,51,3107	0/0:18,0:18:51.17:0,51,3158	0/0:24,0:24:69.20:0,69,4569	0/0:15,0:15:45.14:0,45,2951	0/0:17,0:17:48.16:0,48,3118	1/1:6,2:24:24.08:2623,24,0	0/0:30,0:30:81.26:0,81,5108	1/1:5,2:14:21.07:2326,21,0	0/0:18,0:17:51.17:0,51,2847	0/0:13,0:13:33.08:0,33,1950	0/0:32,0:31:96.33:0,96,6201	0/0:10,0:10:30.10:0,30,1726	0/0:13,0:13:33.10:0,33,2116	0/0:22,0:22:66.23:0,66,4345	0/0:20,0:20:57.17:0,57,3663	0/1:20,0:20:99:3211,0,163	0/0:27,0:27:81.26:0,81,5142	1/1:6,1:11:9.03:817,9,0
chr10	98620702	.	TAGAC	T	2897.52	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.436;DP=607;FS=1.809;HRun=0;HaplotypeScore=102.0222;InbreedingCoeff=0.9994;MQ=84.64;MQ0=0;MQRankSum=-5.448;QD=43.90;ReadPosRankSum=3.278;VQSLOD=4.0079;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,40:45:96.33:1857,96,0	0/0:11,0:11:33.11:0,33,904	0/0:20,0:20:54.18:0,54,1399	0/0:21,0:21:56.36:0,56,1219	0/0:16,0:16:36.12:0,36,946	0/0:22,0:22:66.23:0,66,1798	0/0:21,0:21:63.22:0,63,1668	0/0:27,0:27:72.25:0,72,1933	0/0:16,0:16:48.16:0,48,1297	0/0:16,0:16:45.15:0,45,1224	0/0:12,0:12:36.12:0,36,967	0/0:26,0:26:75.26:0,75,2043	0/0:21,0:21:57.18:0,57,1502	0/0:27,0:27:81.28:0,81,2163	0/0:26,0:26:75.26:0,75,1990	0/0:17,0:17:48.16:0,48,1305	0/0:30,0:30:87.28:0,87,2316	1/1:0,21:21:60.21:1162,60,0	0/0:16,0:16:48.16:0,48,1237	0/0:15,0:15:45.15:0,45,1232	0/0:58,0:58:99:0,163,4348	0/0:24,0:24:66.23:0,66,1805	0/0:16,0:16:48.16:0,48,1303	0/0:24,0:24:72.25:0,72,1924	0/0:16,0:16:45.15:0,45,1231	0/0:13,0:13:36.12:0,36,957	0/0:19,0:19:57.18:0,57,1491	0/0:10,0:10:30.10:0,30,821
chr10	98621128	.	GA	G	517.15	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.291;DP=807;FS=1.862;HRun=4;HaplotypeScore=77.0059;InbreedingCoeff=0.9764;MQ=82.66;MQ0=0;MQRankSum=-2.775;QD=25.86;ReadPosRankSum=1.166;VQSLOD=2.5428;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,138,1876	0/0:6,0:6:18.06:0,18,252	0/0:28,0:28:65.95:0,66,944	0/0:24,0:24:53.36:0,53,755	0/0:18,0:18:54.11:0,54,699	0/0:28,0:28:84.28:0,84,1175	0/0:40,0:40:99:0,117,1589	0/0:29,0:29:84.27:0,84,1159	0/0:34,0:34:99:0,102,1410	0/0:23,0:22:69.22:0,69,951	0/0:19,0:19:57.17:0,57,764	0/0:29,0:29:81.26:0,81,1118	0/0:34,0:34:93.26:0,93,1229	0/0:43,0:43:99:0,123,1659	0/0:23,0:23:69.20:0,69,905	1/1:1,19:20:15.17:606,15,0	0/0:35,0:35:99:0,102,1407	0/0:34,0:34:99:0,102,1407	0/0:30,0:30:84.25:0,84,1141	0/0:26,0:26:72.24:0,72,1008	0/0:63,0:63:99:0,171,2349	0/0:22,0:22:63.21:0,63,880	0/0:29,0:29:84.22:0,84,1082	0/0:32,0:32:93.28:0,93,1266	0/0:22,0:22:63.21:0,63,882	0/0:31,0:31:87.28:0,87,1195	0/0:24,0:23:72.22:0,72,975	0/0:12,0:12:36.12:0,36,503
chr10	98621528	.	CGA	C	2700.06	PASS	AB=0.988;AC=6;AF=0.107;AN=56;BaseQRankSum=7.310;DP=547;FS=12.541;HRun=0;HaplotypeScore=77.5556;InbreedingCoeff=0.6000;MQ=63.91;MQ0=0;MQRankSum=-3.062;QD=23.48;ReadPosRankSum=-0.130;VQSLOD=3.6150;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,33:37:89.85:1636,90,0	0/0:13,0:13:39.02:0,39,572	0/0:13,0:11:32.41:0,32,493	0/0:2,0:2:6.02:0,6,111	0/0:22,0:22:66.18:0,66,1234	0/0:13,0:13:39.09:0,39,741	0/0:19,0:19:57.06:0,57,937	0/1:37,0:39:99:173,0,357	0/0:9,0:9:27.04:0,27,464	0/0:27,0:27:80.99:0,81,1283	0/0:24,0:24:72.10:0,72,1270	0/0:22,0:22:66.18:0,66,1259	0/0:18,0:18:51.11:0,51,939	0/0:13,0:13:39.04:0,39,657	0/0:19,0:18:57.17:0,57,1088	0/0:13,0:13:39.12:0,39,733	0/0:23,0:23:69.18:0,69,1285	1/1:2,19:22:65.57:994,66,0	0/0:16,0:16:44.90:0,45,686	0/0:30,0:30:90.11:0,90,1629	0/0:24,0:24:71.86:0,72,1316	0/0:12,0:12:30.06:0,30,480	0/0:21,0:21:63.18:0,63,1091	0/0:25,0:25:75.16:0,75,1377	0/0:18,0:18:54:0,54,881	0/1:17,0:17:34.94:35,0,245	0/0:27,0:26:81.16:0,81,1409	0/0:9,0:9:23.75:0,24,165
chr10	98621529	.	GA	G	235.21	PASS	AB=0.903;AC=5;AF=0.089;AN=56;BaseQRankSum=11.573;DP=545;FS=15.660;HRun=10;HaplotypeScore=75.3409;InbreedingCoeff=0.8173;MQ=64.83;MQ0=0;MQRankSum=-1.574;QD=2.73;ReadPosRankSum=1.300;VQSLOD=-0.7212;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:46.11:210,46,0	0/0:11,0:12:23.90:0,24,247	0/0:14,0:12:17.57:0,18,267	0/0:2,0:2:6.02:0,6,66	0/0:22,0:22:64.37:0,64,685	0/0:14,0:14:36.10:0,36,398	0/0:19,0:19:45.11:0,45,490	0/0:39,0:39:80.96:0,81,838	0/0:8,0:9:23.89:0,24,239	0/0:27,0:27:54.15:0,54,597	0/0:21,2:23:37.12:0,37,638	0/0:22,0:22:63.13:0,63,684	0/0:17,1:18:22.08:0,22,470	0/0:13,0:13:33.08:0,33,358	0/0:19,0:18:51.14:0,51,564	0/0:13,0:13:36.09:0,36,389	0/0:24,0:24:66:0,66,702	1/1:22,0:22:45.36:146,45,0	0/0:15,0:15:27.06:0,27,292	0/0:29,0:30:81.21:0,81,889	0/0:24,0:24:63.17:0,63,697	0/0:11,0:11:18.05:0,18,199	0/0:21,0:22:52.22:0,52,548	0/0:25,0:25:66.18:0,66,730	0/0:16,1:17:16.11:0,16,405	0/0:16,0:16:39.11:0,39,430	0/1:22,3:27:0.42:0,0,628	0/0:9,0:9:24.06:0,24,265
chr10	98621624	.	T	TC	3593.65	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-6.057;DP=586;FS=4.405;HRun=6;HaplotypeScore=62.6106;InbreedingCoeff=0.9955;MQ=73.33;MQ0=0;MQRankSum=2.905;QD=31.80;ReadPosRankSum=-0.665;VQSLOD=3.8971;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:39:99:1321,105,0	0/0:16,0:16:42.09:0,42,428	0/0:14,0:14:35.29:0,35,338	0/0:12,0:12:29.09:0,29,275	0/0:20,0:20:57.12:0,57,580	0/0:24,0:24:60.11:0,60,603	0/0:29,0:29:72.16:0,72,734	1/1:4,21:25:57.13:664,57,0	0/0:11,0:11:27.05:0,27,275	0/0:22,0:22:60.13:0,60,612	0/0:17,0:17:45.10:0,45,458	0/0:24,0:24:63.14:0,63,643	0/0:19,0:19:57.13:0,57,581	0/0:17,0:17:45.10:0,45,459	0/0:22,0:22:60.12:0,60,605	0/0:11,0:11:27.06:0,27,275	0/0:36,0:36:99:0,105,1071	1/1:2,20:22:57.18:717,57,0	0/0:15,0:15:30.06:0,30,306	0/0:17,0:17:45.09:0,45,455	0/0:29,0:29:81.16:0,81,819	0/0:17,0:17:42.06:0,42,418	0/0:21,0:21:51.10:0,51,513	0/0:32,0:32:87.19:0,87,887	0/0:25,0:25:72.15:0,72,727	1/1:3,19:22:57.17:704,57,0	0/0:23,0:23:60.13:0,60,612	1/1:0,5:5:15.05:189,15,0
chr10	98622094	.	AAC	A	272.09	PASS	AB=0.871;AC=14;AF=0.292;AN=48;BaseQRankSum=1.989;DP=535;FS=5.808;HRun=0;HaplotypeScore=100.9449;InbreedingCoeff=0.1196;MQ=28.27;MQ0=148;MQRankSum=1.876;QD=1.52;ReadPosRankSum=1.474;VQSLOD=0.8810;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:41,1:24:3.01:33,3,0	0/1:8,1:9:21.24:21,0,114	./.	./.	./.	1/1:19,1:16:2.88:33,3,0	0/0:23,0:17:21.07:0,21,307	0/0:26,0:16:17.36:0,17,121	0/0:17,0:12:5.86:0,6,90	0/1:12,3:14:51.02:84,0,51	0/0:23,1:20:3.01:0,3,45	0/0:13,0:12:9.03:0,9,135	0/0:15,0:14:6.01:0,6,90	0/0:16,1:13:9.03:0,9,135	./.	0/0:24,0:19:16.63:0,17,126	0/1:12,2:10:24.23:24,0,81	1/1:8,3:6:11.78:97,12,0	0/1:13,1:13:20.75:21,0,116	0/1:17,3:20:43.10:43,0,192	0/0:31,2:14:5.73:0,6,65	0/0:18,0:18:12.03:0,12,160	0/1:19,2:21:24.74:25,0,81	0/0:28,1:17:12.04:0,12,161	0/0:18,1:18:3.01:0,3,45	0/0:22,0:19:36.95:0,37,277	1/1:8,1:8:3.01:34,3,0	0/0:2,0:4:3:0,3,26
chr10	98622119	.	A	ACACT	304.02	PASS	AB=1.000;AC=3;AF=0.058;AN=52;BaseQRankSum=1.628;DP=548;FS=1.757;HRun=0;HaplotypeScore=113.3217;InbreedingCoeff=0.4313;MQ=32.78;MQ0=129;MQRankSum=-2.115;QD=11.69;ReadPosRankSum=3.753;VQSLOD=2.9980;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:26:14.92:0,15,124	0/0:8,0:8:11.75:0,12,184	./.	./.	0/0:18,0:18:8.91:0,9,64	0/0:21,0:18:8.85:0,9,85	0/0:25,0:19:33:0,33,432	0/0:19,0:13:33.61:0,34,235	0/0:18,0:13:9.37:0,9,138	0/0:22,0:19:53.92:0,54,501	0/0:22,0:19:9:0,9,105	0/0:15,0:15:20.90:0,21,234	0/0:13,0:11:8.86:0,9,132	0/0:11,0:10:11.97:0,12,186	0/0:18,0:14:2.94:0,3,18	1/1:2,17:18:14.60:377,15,0	0/0:19,0:15:23.82:0,24,254	0/0:15,0:9:26.68:0,27,226	0/0:16,0:14:36.47:0,36,387	0/0:21,0:20:30:0,30,382	0/0:34,0:17:17.61:0,18,165	0/0:22,0:22:20.76:0,21,268	0/0:19,0:18:12.39:0,12,174	0/0:42,0:27:18.03:0,18,237	0/0:24,0:23:32.60:0,33,301	0/0:19,0:17:33.88:0,34,244	0/0:11,0:10:18.29:0,18,136	0/1:4,0:4:16.96:27,0,17
chr10	98623186	.	GA	G	1601.79	PASS	AB=0.926;AC=9;AF=0.161;AN=56;BaseQRankSum=5.331;DP=557;FS=4.171;HRun=2;HaplotypeScore=77.6597;InbreedingCoeff=0.8404;MQ=71.43;MQ0=1;MQRankSum=0.463;QD=14.05;ReadPosRankSum=2.059;VQSLOD=3.1887;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:32,1:32:54.36:331,54,0	0/0:13,0:13:35.80:0,36,379	0/0:11,0:9:8.49:0,8,109	0/0:20,0:16:28.82:0,29,300	0/0:18,0:18:38.47:0,38,413	0/0:14,0:14:23.72:0,24,258	0/0:22,0:22:51.01:0,51,625	1/1:18,0:16:39.01:351,39,0	0/0:5,0:5:14.96:0,15,154	0/0:26,0:25:67.48:0,67,754	0/0:15,0:15:43.91:0,44,462	0/0:19,0:19:37.43:0,37,332	0/0:23,0:23:51.06:0,51,610	0/0:16,0:16:42.05:0,42,482	0/0:22,0:22:43.86:0,44,489	0/0:13,0:13:24.70:0,25,164	0/0:39,0:39:99:0,107,1335	1/1:17,4:21:11.68:252,12,0	0/0:18,0:18:52.56:0,53,567	0/0:17,0:17:46.98:0,47,529	0/0:17,0:17:42.60:0,43,448	0/0:18,0:18:43.75:0,44,484	0/0:21,0:21:59.42:0,59,715	0/0:17,0:17:44.45:0,44,538	0/0:22,0:22:55.72:0,56,619	0/1:23,0:25:19.47:469,0,19	0/0:37,0:37:75.88:0,76,857	1/1:15,1:17:39.02:361,39,0
chr10	98623187	.	AAT	A	1849.52	PASS	AB=0.848;AC=7;AF=0.125;AN=56;BaseQRankSum=2.410;DP=566;FS=0.000;HRun=0;HaplotypeScore=82.5018;InbreedingCoeff=0.4683;MQ=69.96;MQ0=4;MQRankSum=1.966;QD=15.94;ReadPosRankSum=2.202;VQSLOD=3.2694;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:34:64.98:104,0,65	0/0:13,0:13:36.76:0,37,521	0/0:10,0:8:1.74:0,2,125	0/0:20,0:16:28.13:0,28,330	0/0:18,0:18:44.94:0,45,612	0/0:14,0:14:31.24:0,31,417	0/0:24,0:23:52.95:0,53,870	1/1:1,15:16:39.10:543,39,0	0/0:8,0:8:17.98:0,18,229	0/0:26,0:25:72.16:0,72,1078	0/0:16,0:16:45.01:0,45,618	0/0:21,0:21:53.01:0,53,603	0/0:24,0:24:57.94:0,58,825	0/0:16,0:16:42.06:0,42,606	0/0:21,0:21:48.08:0,48,702	0/0:13,0:13:25.23:0,25,207	0/0:40,0:40:99:0,113,1831	0/1:22,0:22:99:104,0,132	0/0:18,0:18:52.58:0,53,723	0/0:17,0:17:29.72:0,30,655	0/0:16,0:16:45.04:0,45,635	0/0:18,0:18:50.72:0,51,712	0/0:21,0:21:63.02:0,63,973	0/0:18,0:18:52.33:0,52,787	0/0:22,0:21:56.15:0,56,885	0/1:4,20:25:51.97:684,0,52	0/0:36,0:35:87.03:0,87,1272	1/1:2,14:16:38.87:556,39,0
chr10	98623501	.	CTCTGTT	C	532.76	PASS	AB=0.560;AC=1;AF=0.018;AN=56;BaseQRankSum=4.094;DP=689;FS=2.852;HRun=0;HaplotypeScore=141.7538;InbreedingCoeff=-0.0182;MQ=77.47;MQ0=0;MQRankSum=-5.076;QD=38.05;ReadPosRankSum=1.910;VQSLOD=3.8118;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,123,4269	0/0:12,0:12:36.12:0,36,1283	0/0:23,0:23:69.24:0,69,2335	0/0:24,0:24:61.68:0,62,1788	0/0:15,0:15:42.14:0,42,1423	0/0:20,0:20:54.15:0,54,1697	0/0:30,0:30:90.29:0,90,3028	0/0:28,0:28:66.19:0,66,2061	0/0:18,0:18:51.18:0,51,1740	0/0:31,0:31:93.32:0,93,3179	0/0:13,0:13:39.13:0,39,1383	0/0:24,0:24:72.25:0,72,2495	0/0:19,0:19:51.18:0,51,1815	0/0:22,0:22:63.22:0,63,2061	0/0:26,0:26:75.24:0,75,2505	0/1:3,11:14:76.88:607,0,77	0/0:38,0:38:99:0,108,3780	0/0:34,0:34:99:0,99,3385	0/0:31,0:31:84.29:0,84,2849	0/0:24,0:24:69.24:0,69,2450	0/0:42,0:42:99:0,123,4209	0/0:15,0:15:42.13:0,42,1330	0/0:18,0:18:54.19:0,54,1794	0/0:23,0:23:66.23:0,66,2302	0/0:27,0:27:75.26:0,75,2601	0/0:23,0:23:63.22:0,63,2247	0/0:28,0:28:81.28:0,81,2691	0/0:19,0:19:57.16:0,57,1718
chr10	98625119	.	TACACACACACACACACACAC	T	2225.21	PASS	AB=0.806;AC=5;AF=0.093;AN=54;BaseQRankSum=7.032;DP=580;FS=1.817;HRun=0;HaplotypeScore=256.9489;InbreedingCoeff=0.7060;MQ=59.88;MQ0=9;MQRankSum=-1.626;QD=30.48;ReadPosRankSum=-0.805;VQSLOD=2.3841;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:18.06:0,18,425	0/0:4,0:6:9.40:0,9,711	0/0:24,0:14:3.01:0,3,65	./.	0/0:20,0:22:30.08:0,30,2125	0/0:12,0:12:15.05:0,15,1221	0/0:17,0:20:27.56:0,28,2053	1/1:21,12:33:26.49:475,26,0	0/0:16,0:18:36.12:0,36,3040	0/0:19,0:22:47.19:0,47,3090	0/0:13,0:13:15.05:0,15,1110	0/0:21,0:21:15.05:0,15,1055	0/0:11,0:24:20.92:0,21,1040	0/0:8,0:16:8.97:0,9,562	0/0:20,0:19:23.11:0,23,1601	0/0:4,0:10:24.08:0,24,1330	0/0:32,0:34:78.27:0,78,6135	0/0:7,0:7:15.02:0,15,481	0/0:9,0:9:9.03:0,9,806	0/0:14,0:13:18.06:0,18,1277	0/0:31,0:35:39.61:0,40,2838	0/0:19,0:29:25.62:0,26,1533	0/0:12,0:21:14.74:0,15,449	0/0:22,0:36:29.46:0,29,1781	0/0:27,0:27:24.55:0,25,1555	0/1:19,6:22:3.91:938,0,4	0/0:19,0:18:36.12:0,36,2486	1/1:6,8:15:18.06:938,18,0
chr10	98625362	.	GA	G	3000.03	PASS	AB=0.882;AC=11;AF=0.196;AN=56;BaseQRankSum=13.379;DP=626;FS=0.365;HRun=10;HaplotypeScore=76.3925;InbreedingCoeff=0.8797;MQ=75.04;MQ0=1;MQRankSum=0.007;QD=18.29;ReadPosRankSum=1.914;VQSLOD=4.3592;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,28:35:86.95:752,87,0	0/0:10,0:10:27.07:0,27,299	0/1:12,2:15:17.58:18,0,207	0/0:11,0:10:17.98:0,18,177	0/0:31,0:31:78.20:0,78,853	0/0:16,0:16:42.11:0,42,457	0/0:18,0:20:59.83:0,60,626	1/1:5,27:32:80.95:698,81,0	0/0:18,0:18:51.13:0,51,557	0/0:28,2:30:17.07:0,17,645	0/0:13,0:13:39.06:0,39,418	0/0:14,1:15:13.47:0,13,365	0/0:18,0:18:45.04:0,45,454	0/0:25,0:25:66.14:0,66,700	0/0:14,0:14:42.09:0,42,448	0/0:5,0:22:48.63:0,49,279	0/0:30,0:30:78.19:0,78,853	1/1:2,29:31:86.98:755,87,0	0/0:24,0:24:63.17:0,63,695	0/0:24,0:24:66.15:0,66,706	0/0:14,0:14:33.06:0,33,353	0/0:26,0:26:63.17:0,63,691	0/0:24,0:24:69.18:0,69,756	0/0:25,0:25:66.14:0,66,705	0/0:22,0:22:57.15:0,57,630	1/1:7,34:41:59.77:748,60,0	0/0:29,1:30:49.15:0,49,770	1/1:0,9:9:24:208,24,0
chr10	98625476	.	AG	A	5504.15	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.985;DP=635;FS=10.039;HRun=1;HaplotypeScore=67.2857;InbreedingCoeff=0.9854;MQ=75.64;MQ0=0;MQRankSum=-0.263;QD=35.97;ReadPosRankSum=0.384;VQSLOD=4.3431;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,47:48:99:1842,132,0	0/0:3,0:3:9.03:0,9,144	0/0:14,0:14:42.12:0,42,619	0/0:10,0:10:20.22:0,20,322	0/0:28,0:28:84.29:0,84,1330	0/0:23,0:23:69.19:0,69,1029	0/0:35,0:35:99:0,105,1630	1/1:0,32:32:93.26:1231,93,0	0/0:16,0:16:48.16:0,48,767	0/0:22,0:22:66.19:0,66,967	0/0:12,0:12:36.12:0,36,571	0/0:19,0:19:57.18:0,57,882	0/0:14,0:14:39.13:0,39,609	0/0:18,0:18:54.18:0,54,863	0/0:27,0:27:81.25:0,81,1248	0/0:20,0:20:57.15:0,57,842	0/0:35,0:35:99:0,105,1575	1/1:4,10:14:36.09:483,36,0	0/0:21,0:21:63.19:0,63,963	0/0:18,0:18:54.18:0,54,853	0/0:31,0:31:93.32:0,93,1483	0/0:22,0:22:66.16:0,66,1002	0/0:25,0:25:75.24:0,75,1173	0/0:28,0:28:81.25:0,81,1269	0/0:18,0:18:48.14:0,48,718	1/1:6,26:32:89.62:1153,90,0	0/0:23,0:22:69.24:0,69,1101	1/1:0,27:27:57.19:796,57,0
chr10	98625538	.	C	CCT	4298.16	PASS	AB=0.614;AC=9;AF=0.161;AN=56;BaseQRankSum=3.620;DP=691;FS=1.258;HRun=0;HaplotypeScore=104.1479;InbreedingCoeff=0.9227;MQ=81.30;MQ0=1;MQRankSum=-3.240;QD=27.55;ReadPosRankSum=-0.494;VQSLOD=6.0503;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,32:51:1.66:1463,0,2	0/0:10,0:10:26.82:0,27,306	0/0:31,0:25:31.86:0,32,289	0/0:42,0:33:22.99:0,23,235	0/0:30,0:32:68.88:0,69,798	0/0:18,0:18:45.13:0,45,538	0/0:18,0:18:33.10:0,33,403	1/1:31,0:31:63.14:644,63,0	0/0:17,0:18:41.95:0,42,477	0/0:23,0:23:54.16:0,54,641	0/0:15,0:15:39.11:0,39,464	0/0:15,0:15:33.10:0,33,402	0/0:14,0:14:36.11:0,36,440	0/0:16,0:17:35.93:0,36,405	0/0:24,0:25:57.01:0,57,674	0/0:26,0:26:72.23:0,72,880	0/0:32,0:32:84.22:0,84,1001	1/1:2,16:18:45.15:730,45,0	0/0:18,0:18:39.10:0,39,463	0/0:18,0:19:50.98:0,51,589	0/0:36,0:36:84.24:0,84,1003	0/0:23,0:24:53.93:0,54,595	0/0:23,0:23:48.13:0,48,574	0/0:36,0:37:86.92:0,87,1005	0/0:16,0:16:45.14:0,45,550	1/1:41,0:41:99:1096,102,0	0/0:26,0:26:57.16:0,57,683	1/1:15,0:15:30.09:364,30,0
chr10	98625541	.	C	CTA	5230.90	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-2.033;DP=692;FS=0.000;HRun=0;HaplotypeScore=102.1370;InbreedingCoeff=0.8672;MQ=80.93;MQ0=1;MQRankSum=-1.080;QD=32.49;ReadPosRankSum=0.959;VQSLOD=6.9255;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:51,0:51:99:653,0,241	0/0:10,0:10:30.09:0,30,428	0/0:34,0:28:64.46:0,64,646	0/0:41,0:32:56.77:0,57,662	0/0:30,0:30:87.12:0,87,1149	0/0:17,0:17:48.14:0,48,709	0/0:14,0:14:42.10:0,42,580	1/1:4,30:35:87.19:1417,87,0	0/0:17,0:17:51.08:0,51,687	0/0:23,0:23:60.19:0,60,882	0/0:16,0:16:45.12:0,45,643	0/0:15,0:15:45.10:0,45,604	0/0:15,0:15:39.12:0,39,573	0/0:17,0:17:48.07:0,48,623	0/0:25,0:25:75.13:0,75,995	0/0:28,0:28:78.24:0,78,1150	0/0:32,0:32:90.27:0,90,1321	1/1:18,0:18:27.91:334,28,0	0/0:18,0:18:48.14:0,48,675	0/0:21,0:21:57.12:0,57,802	0/0:35,0:35:99:0,102,1426	0/0:22,0:22:63.07:0,63,855	0/0:23,0:23:63.09:0,63,847	0/0:36,0:36:99:0,102,1397	0/0:16,0:16:48.15:0,48,711	1/1:6,35:41:99:2113,120,0	0/0:26,0:26:75.17:0,75,1013	1/1:6,10:16:48.01:713,48,0
chr10	98626427	.	T	TTGGAAGAG	14793.80	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-4.717;DP=747;FS=3.185;HRun=0;HaplotypeScore=180.3984;InbreedingCoeff=0.9996;MQ=86.86;MQ0=0;MQRankSum=-16.123;QD=107.98;ReadPosRankSum=-2.378;VQSLOD=4.7900;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,29:42:99:4307,108,0	0/0:11,0:11:33.10:0,33,845	0/0:26,0:26:66.19:0,66,1683	0/0:28,0:28:74.29:0,74,1814	0/0:24,0:24:69.24:0,69,1968	0/0:24,0:24:72.24:0,72,1952	0/0:21,0:21:63.22:0,63,1798	1/1:19,16:36:96.33:4002,96,0	0/0:30,0:30:90.31:0,90,2527	0/0:42,0:42:99:0,126,3467	0/0:26,0:26:75.26:0,75,2152	0/0:23,0:23:66.23:0,66,1879	0/0:32,0:32:90.31:0,90,2530	0/0:24,0:24:72.22:0,72,1930	0/0:24,0:24:72.25:0,72,2062	0/0:29,0:29:84.28:0,84,2352	0/0:21,0:21:60.21:0,60,1686	1/1:5,7:12:27.09:1113,27,0	0/0:24,0:24:72.21:0,72,1829	0/0:24,0:24:72.24:0,72,1972	0/0:34,0:34:99:0,102,2825	0/0:32,0:32:96.33:0,96,2713	0/0:25,0:25:69.24:0,69,1969	0/0:27,0:27:78.27:0,78,2239	0/0:31,0:31:90.31:0,90,2578	1/1:9,18:31:93.32:3902,93,0	0/0:28,0:28:81.28:0,81,2322	1/1:5,10:16:33.11:1470,33,0
chr10	98628424	.	TA	T	3843.62	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.698;DP=655;FS=0.000;HRun=7;HaplotypeScore=61.8538;InbreedingCoeff=0.9994;MQ=85.00;MQ0=0;MQRankSum=-2.441;QD=26.69;ReadPosRankSum=0.983;VQSLOD=4.2313;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:36:93.21:949,93,0	0/0:12,0:12:27.09:0,27,340	0/0:25,0:25:57.16:0,57,677	0/0:18,0:18:31.33:0,31,427	0/0:35,0:35:99:0,102,1259	0/0:36,0:36:93.26:0,93,1152	0/0:20,0:20:54.16:0,54,665	1/1:4,27:31:81.06:790,81,0	0/0:11,0:11:30.10:0,30,374	0/0:31,0:31:84.25:0,84,1034	0/0:27,0:27:72.17:0,72,875	0/0:21,0:21:60.19:0,60,755	0/0:15,0:15:42.13:0,42,528	0/0:23,0:23:60.12:0,60,713	0/0:26,0:26:78.24:0,78,968	1/1:2,22:24:63.14:643,63,0	0/0:15,0:15:33.11:0,33,415	1/1:0,12:12:30.07:306,30,0	0/0:14,0:14:39.12:0,39,491	0/0:30,0:30:84.25:0,84,1031	0/0:17,0:17:51.16:0,51,642	0/0:23,0:23:63.20:0,63,788	0/0:23,0:23:60.19:0,60,754	0/0:23,0:23:69.17:0,69,837	0/0:34,0:34:96.28:0,96,1183	1/1:2,24:26:37.43:697,37,0	0/0:32,0:32:84.23:0,84,1039	1/1:0,15:15:45.10:459,45,0
chr10	98629212	.	TG	T	1275.28	PASS	AB=0.780;AC=8;AF=0.143;AN=56;BaseQRankSum=11.676;DP=986;FS=66.581;HRun=2;HaplotypeScore=123.1152;InbreedingCoeff=0.6391;MQ=59.15;MQ0=59;MQRankSum=-10.702;QD=11.39;ReadPosRankSum=-3.640;VQSLOD=-0.6825;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,8:9:11.91:133,12,0	0/0:19,0:18:39.13:0,39,580	0/0:59,0:33:92.13:0,92,1330	0/0:60,0:36:99:0,102,1337	0/0:35,0:34:93.31:0,93,1374	0/0:28,0:27:78.26:0,78,1159	0/0:42,0:38:99:0,108,1569	0/1:26,22:36:96.05:567,0,96	0/0:22,0:19:51.17:0,51,753	0/0:66,0:58:99:0,150,2192	0/0:16,0:14:36.12:0,36,534	0/0:31,0:31:90.28:0,90,1302	0/0:26,0:24:63.17:0,63,918	0/0:37,0:33:90.28:0,90,1305	0/0:27,0:24:69.22:0,69,1010	0/0:30,0:28:71.42:0,71,1078	0/0:26,0:23:60.20:0,60,888	0/1:6,1:6:7.70:49,0,8	0/0:33,0:26:65.33:0,65,976	0/0:39,0:33:96.31:0,96,1411	0/0:106,1:95:99:0,224,3358	0/0:39,0:35:99:0,102,1523	0/0:23,0:21:54.18:0,54,805	0/0:52,0:46:99:0,126,1871	0/0:33,1:30:79.57:0,80,1201	1/1:23,14:27:65.20:593,65,0	0/0:23,0:21:60.20:0,60,899	1/1:5,3:6:0.67:73,1,0
chr10	98629242	.	G	GGT	496.70	PASS	AB=0.733;AC=5;AF=0.093;AN=54;BaseQRankSum=10.854;DP=1017;FS=30.876;HRun=0;HaplotypeScore=148.0589;InbreedingCoeff=0.6314;MQ=46.14;MQ0=117;MQRankSum=-10.389;QD=7.88;ReadPosRankSum=-1.803;VQSLOD=1.6068;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,4:6:24.23:32,0,24	0/0:22,0:20:33.09:0,33,405	./.	0/0:40,0:5:5.84:0,6,35	0/0:30,0:27:57.17:0,57,701	0/0:26,0:25:65.64:0,66,812	0/0:43,0:39:53.53:0,54,877	0/0:56,0:39:3.68:0,4,310	0/0:33,0:28:63.79:0,64,734	0/0:63,0:47:65.46:0,65,1010	0/0:12,0:10:18.06:0,18,227	0/0:32,0:32:45.50:0,46,762	0/0:36,0:32:67.23:0,67,877	0/0:40,0:33:66.21:0,66,824	0/0:28,0:24:60.14:0,60,730	0/0:30,0:26:44.27:0,44,745	0/0:30,0:24:54.17:0,54,686	0/0:5,0:4:1.54:0,2,27	0/0:48,0:25:21.02:0,21,453	0/0:41,0:31:72.22:0,72,898	0/0:141,0:126:99:0,283,3532	0/0:32,0:27:48.13:0,48,592	0/0:22,0:19:36.11:0,36,453	0/0:49,0:40:99:0,102,1292	0/0:31,0:22:48.13:0,48,584	1/1:35,5:28:50.70:475,51,0	0/0:23,0:20:45.07:0,45,525	1/1:11,0:10:20.01:117,20,0
chr10	98629248	.	T	TGTG	960.58	PASS	AB=0.935;AC=5;AF=0.093;AN=54;BaseQRankSum=8.359;DP=961;FS=26.047;HRun=0;HaplotypeScore=160.0665;InbreedingCoeff=0.3989;MQ=46.72;MQ0=101;MQRankSum=-7.966;QD=11.86;ReadPosRankSum=1.652;VQSLOD=1.4639;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:5:0.94:0,1,2	0/0:19,0:18:39.13:0,39,615	./.	0/0:37,0:5:12.04:0,12,172	0/0:28,0:26:66.21:0,66,1043	0/0:28,0:27:71.99:0,72,1125	0/0:39,0:36:60.29:0,60,1216	0/0:58,0:39:39.82:0,40,677	0/0:30,0:26:64.12:0,64,1022	0/0:52,0:43:14.86:0,15,1504	0/0:11,0:9:18.06:0,18,296	0/0:27,0:26:60.48:0,60,1060	0/0:34,0:30:72.24:0,72,1161	0/0:39,0:33:80.94:0,81,1245	0/0:27,0:23:66.21:0,66,1035	0/1:28,0:24:0.46:0,0,945	0/0:29,0:24:58.40:0,58,918	0/1:5,0:4:2.17:2,0,7	0/0:48,0:26:58.87:0,59,836	0/0:37,0:32:87.22:0,87,1305	0/0:140,0:129:99:0,321,5112	0/0:27,0:25:60.15:0,60,890	0/0:20,0:18:45.15:0,45,713	0/0:48,0:40:99:0,105,1721	0/0:27,0:19:48.16:0,48,794	0/1:28,9:27:19.83:726,0,20	0/0:23,0:20:51.17:0,51,808	1/1:9,2:10:5.32:327,5,0
chr10	98629253	.	G	GGT	465.52	PASS	AB=0.909;AC=9;AF=0.161;AN=56;BaseQRankSum=9.356;DP=942;FS=34.141;HRun=0;HaplotypeScore=140.6179;InbreedingCoeff=0.7139;MQ=47.83;MQ0=95;MQRankSum=-8.522;QD=4.39;ReadPosRankSum=1.104;VQSLOD=1.6070;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:5:2.44:6,2,0	0/0:18,0:17:31.04:0,31,420	0/0:44,0:2:2.92:0,3,17	0/0:43,0:5:14.99:0,15,153	0/0:26,0:24:46.19:0,46,660	0/0:32,0:31:68.80:0,69,869	0/0:36,0:35:60.88:0,61,865	0/1:45,5:32:96.77:200,0,97	0/0:28,0:27:58.72:0,59,713	0/0:52,0:45:81.43:0,81,1034	0/0:10,0:9:15.05:0,15,191	0/0:28,0:27:60.07:0,60,729	0/0:33,0:30:69.20:0,69,858	0/0:39,0:35:78.17:0,78,928	0/0:23,0:22:54.15:0,54,664	0/0:31,0:27:56.61:0,57,668	0/0:29,0:25:65.54:0,66,800	1/1:3,0:3:2.92:9,3,0	0/0:43,0:22:39.12:0,39,495	0/0:34,0:29:63.15:0,63,788	0/0:147,0:137:99:0,313,3888	0/0:27,0:25:63.02:0,63,765	0/0:17,0:16:48.13:0,48,597	0/0:48,0:43:86.76:0,87,1251	0/0:24,0:19:36.11:0,36,462	1/1:32,3:25:30.73:234,31,0	0/0:20,0:19:38.99:0,39,476	1/1:7,1:8:19.13:155,19,0
chr10	98629262	.	GTATAT	G	99.24	PASS	AB=0.854;AC=4;AF=0.071;AN=56;BaseQRankSum=6.941;DP=885;FS=6.499;HRun=0;HaplotypeScore=165.9187;InbreedingCoeff=0.1043;MQ=48.91;MQ0=70;MQRankSum=-6.492;QD=2.76;ReadPosRankSum=0.351;VQSLOD=2.3560;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:3,2:4:6.72:50,0,7	0/0:15,0:14:36.08:0,36,1120	0/0:63,0:4:5.62:0,6,181	0/0:56,0:9:21.65:0,22,630	0/0:25,0:24:69.23:0,69,2130	0/0:29,0:29:78.20:0,78,2576	0/0:39,0:38:72.14:0,72,2871	0/0:32,0:19:26.99:0,27,554	0/0:29,1:28:60.29:0,60,2154	0/0:40,0:36:99:0,105,3312	0/0:8,0:8:21.07:0,21,664	0/0:27,0:26:72.23:0,72,2252	0/0:28,0:27:69.24:0,69,2198	0/0:35,0:34:87.30:0,87,2702	0/0:22,0:22:66.23:0,66,2030	0/0:23,0:22:47.85:0,48,1959	0/0:28,0:26:75.24:0,75,2371	0/1:3,1:3:5.02:56,0,5	0/0:39,0:20:51.16:0,51,1568	0/0:30,0:27:78.17:0,78,2405	0/0:147,0:138:99:0,363,11579	0/0:24,0:23:69.24:0,69,2173	0/0:17,0:17:51.18:0,51,1645	0/0:45,0:42:98.87:0,99,3562	0/0:25,0:20:45.13:0,45,1344	0/1:17,1:15:62.17:62,0,173	0/0:18,0:17:42.14:0,42,1337	0/1:8,0:7:40.82:41,0,42
chr10	98629263	.	T	TG	639.70	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.937;DP=863;FS=43.573;HRun=1;HaplotypeScore=109.1041;InbreedingCoeff=0.8983;MQ=49.24;MQ0=67;MQRankSum=-8.496;QD=19.38;ReadPosRankSum=2.435;VQSLOD=1.2468;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:4:5.69:48,6,0	0/0:14,0:13:36.10:0,36,485	0/0:67,0:5:5.65:0,6,82	0/0:58,0:9:26.98:0,27,336	0/0:25,0:24:69:0,69,915	0/0:29,0:29:65.97:0,66,1035	0/0:37,0:37:87.41:0,87,1250	0/0:26,2:15:19.47:0,19,240	0/0:30,0:28:71.51:0,72,937	0/0:39,0:35:99:0,105,1453	0/0:8,0:8:21.06:0,21,276	0/0:27,0:26:69.23:0,69,959	0/0:28,0:27:69.23:0,69,962	0/0:33,0:33:87.29:0,87,1206	0/0:22,0:22:66.16:0,66,865	0/0:23,0:22:61.75:0,62,827	0/0:28,0:26:75.04:0,75,1015	1/1:3,0:2:5.34:23,5,0	0/0:40,0:21:50.80:0,51,708	0/0:30,0:27:75.24:0,75,1028	0/0:141,0:135:99:0,357,4939	0/0:24,0:23:69.12:0,69,930	0/0:17,0:17:51.17:0,51,712	0/0:43,0:41:99:0,114,1528	0/0:21,0:16:42.14:0,42,585	1/1:8,8:13:35.73:453,36,0	0/0:17,0:17:42.14:0,42,586	1/1:4,4:7:21.03:262,21,0
chr10	98629326	.	TTG	T	577.01	PASS	AB=0.756;AC=4;AF=0.071;AN=56;BaseQRankSum=8.031;DP=1031;FS=6.225;HRun=0;HaplotypeScore=134.9004;InbreedingCoeff=0.5583;MQ=52.64;MQ0=34;MQRankSum=-6.668;QD=12.82;ReadPosRankSum=-0.027;VQSLOD=3.2579;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,1:2:2.98:0,3,22	0/0:11,0:11:33.09:0,33,512	0/0:104,1:12:21.05:0,21,310	0/0:114,1:25:29.71:0,30,383	0/0:19,0:18:42.14:0,42,693	0/0:31,0:31:87.29:0,87,1415	0/0:42,0:42:71.78:0,72,1620	0/1:6,2:9:4.33:71,0,4	0/0:22,1:22:9.94:0,10,663	0/0:59,0:57:99:0,136,2211	0/0:13,0:13:36.12:0,36,602	0/0:29,0:29:75.26:0,75,1222	0/0:33,0:33:71.86:0,72,1401	0/0:44,0:44:99:0,108,1695	0/0:25,0:24:63.19:0,63,996	0/0:24,0:22:51.17:0,51,853	0/0:42,0:42:99:0,108,1752	0/0:1,0:3:2.74:0,3,12	0/0:28,0:26:19.53:0,20,484	0/0:14,0:14:39.13:0,39,643	0/0:172,0:167:99:0,379,6125	0/0:27,0:27:78.25:0,78,1261	0/0:19,0:19:54.17:0,54,864	0/0:64,0:65:99:0,147,2408	0/0:22,0:22:63.20:0,63,1023	0/1:13,13:24:2.48:450,0,2	0/0:16,0:15:35.95:0,36,595	1/1:4,4:8:14.94:168,15,0
chr10	98629394	.	TA	T	96.16	PASS	AB=0.714;AC=3;AF=0.058;AN=52;BaseQRankSum=5.019;DP=924;FS=5.075;HRun=1;HaplotypeScore=110.0964;InbreedingCoeff=0.5001;MQ=52.01;MQ0=64;MQRankSum=-5.000;QD=7.40;ReadPosRankSum=0.356;VQSLOD=0.6875;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:15,0:15:45.15:0,45,714	0/0:87,0:10:22.99:0,23,299	0/0:84,0:9:21.07:0,21,306	0/0:22,0:21:51.13:0,51,792	0/0:24,0:24:69.24:0,69,1102	0/0:47,0:45:99:0,126,1987	0/0:15,3:5:5.75:0,6,45	0/0:29,0:29:44.38:0,44,1138	0/0:51,0:42:99:0,120,1904	0/0:15,0:15:36.12:0,36,575	0/0:33,0:32:90.31:0,90,1436	0/0:23,0:23:65.90:0,66,962	0/0:27,1:26:72.25:0,72,1144	0/0:30,0:29:81.25:0,81,1243	0/0:20,1:19:51.17:0,51,814	0/0:47,1:45:79.80:0,80,1869	./.	0/0:21,0:13:39.13:0,39,621	0/0:12,0:11:33.11:0,33,527	0/0:155,1:147:99:0,379,5953	0/0:21,0:19:54.18:0,54,831	0/0:18,0:16:45.15:0,45,718	0/0:64,1:63:99:0,149,2317	0/0:22,0:22:60.20:0,60,954	0/1:6,3:8:99:107,0,126	0/0:21,0:21:57.19:0,57,882	1/1:0,3:3:6.02:83,6,0
chr10	98629399	.	TG	T	81.23	PASS	AB=0.769;AC=3;AF=0.058;AN=52;BaseQRankSum=5.086;DP=967;FS=13.126;HRun=2;HaplotypeScore=112.5881;InbreedingCoeff=0.5125;MQ=52.39;MQ0=71;MQRankSum=-4.144;QD=6.77;ReadPosRankSum=1.209;VQSLOD=-0.3538;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:15,0:15:45.15:0,45,671	0/0:89,0:10:19.62:0,20,237	0/0:84,1:10:15.04:0,15,197	0/0:22,0:21:54.16:0,54,799	0/0:26,0:26:75.24:0,75,1083	0/0:46,1:45:99:0,126,1788	0/0:17,2:6:8.76:0,9,97	0/0:33,0:32:57.62:0,58,1284	0/0:57,0:44:99:0,120,1789	0/0:15,0:15:36.12:0,36,539	0/0:35,0:34:96.29:0,96,1378	0/0:22,1:23:26.08:0,26,831	0/0:33,1:31:87.26:0,87,1251	0/0:32,0:31:87.28:0,87,1264	0/0:22,0:20:54.17:0,54,790	0/0:53,0:49:99:0,129,1898	./.	0/0:22,0:14:39.13:0,39,575	0/0:16,0:15:45.14:0,45,629	0/0:154,7:150:99:0,323,5414	0/0:21,0:19:54.18:0,54,792	0/0:22,0:20:45.13:0,45,630	0/0:57,2:58:99:0,132,1971	0/0:24,0:23:54.16:0,54,765	0/1:7,3:8:97.80:98,0,116	0/0:19,0:19:54.18:0,54,797	1/1:0,2:2:6.02:77,6,0
chr10	98629504	.	GTGTA	G	64.16	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.927;DP=938;FS=4.709;HRun=0;HaplotypeScore=166.4726;InbreedingCoeff=0.7725;MQ=56.14;MQ0=46;MQRankSum=-3.225;QD=5.83;ReadPosRankSum=-4.905;VQSLOD=1.1443;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,4:9:22.49:151,22,0	0/0:10,0:10:24.07:0,24,544	0/0:74,0:19:34.11:0,34,993	0/0:70,0:19:40.39:0,40,628	0/0:32,0:32:87.10:0,87,2011	0/0:31,0:31:87.12:0,87,2109	0/0:39,0:39:99:0,99,2301	0/0:7,0:1:3.01:0,3,50	0/0:29,0:29:84.05:0,84,1911	0/0:68,0:62:99:0,165,3620	0/0:18,0:15:39.12:0,39,972	0/0:45,0:45:99:0,119,2877	0/0:31,0:31:54.19:0,54,1576	0/0:30,0:28:75.14:0,75,1777	0/0:37,0:35:96.21:0,96,2127	0/0:22,0:19:42.13:0,42,1017	0/0:37,0:36:61.86:0,62,2106	1/1:1,0:1:2.96:19,3,0	0/0:35,0:27:63.01:0,63,1206	0/0:21,0:19:48.07:0,48,1031	0/0:104,0:98:99:0,254,6304	0/0:47,0:47:99:0,121,3089	0/0:17,0:16:42.12:0,42,1024	0/0:69,0:68:99:0,157,3908	0/0:24,0:21:59.81:0,60,1388	0/0:11,0:9:23.50:0,24,222	0/0:17,0:17:48.06:0,48,1040	0/0:2,0:2:6.02:0,6,121
chr10	98629508	.	ATGTGTGTG	A	483.12	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=7.555;DP=921;FS=18.033;HRun=0;HaplotypeScore=222.6065;InbreedingCoeff=0.6017;MQ=55.48;MQ0=40;MQRankSum=-6.922;QD=21.01;ReadPosRankSum=-4.044;VQSLOD=1.3425;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:8,3:10:22.89:348,23,0	0/0:9,0:9:21.07:0,21,866	0/0:73,0:21:62.67:0,63,1606	0/0:73,0:16:47.85:0,48,1207	0/0:32,0:32:93.30:0,93,3511	0/0:35,0:35:99:0,99,3626	0/0:39,0:39:99:0,105,3739	0/0:9,0:1:3.01:0,3,103	0/0:29,0:29:83.94:0,84,3079	0/0:65,0:60:99:0,165,6107	0/0:15,0:14:39.13:0,39,1489	0/0:44,0:44:99:0,127,4977	0/0:28,0:28:72.23:0,72,2547	0/0:27,0:26:75.24:0,75,2917	0/0:38,0:36:99:0,108,3698	0/0:23,0:20:45.10:0,45,1635	0/0:36,0:35:87.28:0,87,3496	1/1:0,1:1:3.01:38,3,0	0/0:34,0:26:60.21:0,60,2009	0/0:18,0:17:48.16:0,48,1828	0/0:103,0:97:99:0,257,10171	0/0:47,0:47:99:0,126,5114	0/0:15,0:15:42.14:0,42,1546	0/0:63,0:62:99:0,169,6320	0/0:24,0:22:63.13:0,63,2285	0/1:11,0:10:99:214,0,182	0/0:16,0:16:45.15:0,45,1782	0/0:2,0:2:6.02:0,6,137
chr10	98629517	.	GTA	G	108.65	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=7.674;DP=889;FS=4.584;HRun=0;HaplotypeScore=133.0172;InbreedingCoeff=0.3244;MQ=55.87;MQ0=30;MQRankSum=-5.825;QD=3.40;ReadPosRankSum=-2.797;VQSLOD=2.1795;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:11:21.63:121,0,22	0/0:9,0:9:24.06:0,24,427	0/0:64,1:24:43.28:0,43,931	0/0:73,0:19:45.01:0,45,887	0/0:32,0:32:93.32:0,93,1768	0/0:34,0:34:99:0,102,1918	0/0:33,1:34:93.24:0,93,1668	1/1:5,5:3:6.02:81,6,0	0/0:31,0:31:76.79:0,77,1557	0/0:60,0:59:99:0,120,2889	0/0:14,0:13:36.11:0,36,658	0/0:42,0:42:99:0,123,2319	0/0:27,0:27:71.83:0,72,1306	0/0:25,0:24:71.73:0,72,1333	0/0:37,0:35:99:0,105,1941	0/0:20,0:20:36.12:0,36,690	0/0:30,1:30:54.59:0,55,1498	0/0:1,0:1:3.01:0,3,44	0/0:29,0:26:23.42:0,23,904	0/0:20,0:19:54.16:0,54,976	0/0:101,0:96:99:0,246,4472	0/0:51,0:51:99:0,133,2532	0/0:15,0:15:42:0,42,768	0/0:56,0:57:99:0,153,2811	0/0:27,0:26:60.28:0,60,1383	0/1:10,0:9:3.77:4,0,129	0/0:18,0:18:51.17:0,51,980	0/0:2,0:2:0.10:0,0,14
chr10	98629523	.	GTA	G	276.51	PASS	AB=0.867;AC=6;AF=0.107;AN=56;BaseQRankSum=7.575;DP=874;FS=3.251;HRun=0;HaplotypeScore=133.1190;InbreedingCoeff=0.5246;MQ=55.19;MQ0=25;MQRankSum=-4.913;QD=7.28;ReadPosRankSum=-0.758;VQSLOD=3.4389;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:16.17:122,0,16	0/0:8,0:8:24.07:0,24,407	0/0:66,0:21:53.41:0,53,802	0/0:62,0:18:46.67:0,47,895	0/0:32,0:32:93.31:0,93,1665	0/0:37,0:37:99:0,99,1679	0/0:32,0:32:84.23:0,84,1444	1/1:13,1:6:8.58:103,9,0	0/0:28,0:28:68.56:0,69,1416	0/0:57,0:57:99:0,145,2638	0/0:13,0:12:33.10:0,33,572	0/0:45,0:45:99:0,129,2128	0/0:29,0:29:71.42:0,71,1199	0/0:26,0:26:43.78:0,44,1234	0/0:38,0:36:99:0,105,1862	0/0:20,0:20:35.99:0,36,622	0/0:31,0:31:43.91:0,44,1363	0/0:1,0:1:2.22:0,2,7	0/0:29,0:25:32.07:0,32,815	0/0:19,0:18:51.16:0,51,903	0/0:95,0:91:99:0,230,4059	0/0:47,0:47:99:0,129,2270	0/0:15,0:15:38.99:0,39,684	0/0:59,0:59:99:0,159,2805	0/0:28,0:27:77.04:0,77,1317	0/1:7,4:10:99:114,0,102	0/0:19,0:19:54.17:0,54,938	1/1:0,2:2:5.95:59,6,0
chr10	98629549	.	TG	T	586.66	PASS	AB=0.870;AC=6;AF=0.107;AN=56;BaseQRankSum=11.048;DP=896;FS=84.289;HRun=1;HaplotypeScore=135.9242;InbreedingCoeff=0.4958;MQ=53.53;MQ0=30;MQRankSum=-8.833;QD=8.63;ReadPosRankSum=-5.433;VQSLOD=-0.7224;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,11:15:28.01:334,28,0	0/0:7,0:7:18.06:0,18,287	0/0:56,0:11:33.11:0,33,468	0/0:49,0:16:36.97:0,37,507	0/0:34,0:34:92.49:0,92,1366	0/0:34,0:34:93.30:0,93,1405	0/0:31,0:31:81.25:0,81,1204	0/1:26,9:25:91.53:253,0,92	0/0:28,1:29:81.27:0,81,1237	0/0:52,0:52:99:0,146,2164	0/0:19,0:18:48.14:0,48,713	0/0:45,0:45:99:0,129,1870	0/0:29,0:29:78.24:0,78,1173	0/0:26,0:25:71.94:0,72,1058	0/0:39,0:36:99:0,105,1588	0/0:19,0:19:14.10:0,14,167	0/0:36,0:36:96.32:0,96,1463	1/1:0,1:1:3.01:34,3,0	0/0:29,1:29:60.69:0,61,902	0/0:29,1:30:81.75:0,82,1237	0/0:88,0:86:99:0,210,3021	0/0:45,0:44:99:0,117,1813	0/0:20,0:20:53.07:0,53,756	0/0:52,0:52:99:0,138,2063	0/0:33,0:32:86.18:0,86,1284	0/1:16,1:17:91.99:92,0,128	0/0:20,0:19:54.18:0,54,842	0/0:2,0:1:3.01:0,3,34
chr10	98629552	.	G	GT	900.14	PASS	AB=0.846;AC=3;AF=0.054;AN=56;BaseQRankSum=9.681;DP=900;FS=36.385;HRun=1;HaplotypeScore=138.5342;InbreedingCoeff=-0.0592;MQ=53.47;MQ0=30;MQRankSum=-7.196;QD=12.86;ReadPosRankSum=-4.783;VQSLOD=-0.2562;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:7.64:8,0,40	0/0:7,0:7:18.06:0,18,234	0/0:55,0:11:30.10:0,30,383	0/0:54,0:15:31.89:0,32,379	0/0:36,0:36:89.47:0,89,1129	0/0:32,0:32:90.29:0,90,1161	0/0:32,0:32:81.25:0,81,1027	0/1:16,21:26:21.77:705,0,22	0/0:29,0:29:71.85:0,72,985	0/0:51,0:51:99:0,138,1745	0/0:20,0:19:48.16:0,48,617	0/0:45,0:45:99:0,126,1570	0/0:28,0:28:75.24:0,75,968	0/0:28,0:27:74.83:0,75,928	0/0:39,0:36:99:0,105,1352	0/0:18,0:18:11.06:0,11,111	0/0:35,0:36:90.94:0,91,1233	0/0:1,0:1:2.96:0,3,19	0/0:29,0:27:59.36:0,59,759	0/0:30,0:30:83.28:0,83,1043	0/0:89,0:87:99:0,204,2563	0/0:45,0:44:99:0,114,1474	0/0:20,0:20:54.06:0,54,646	0/0:51,0:51:99:0,135,1726	0/0:33,0:32:86.30:0,86,1092	0/1:16,2:18:91.89:282,0,92	0/0:20,0:19:51.17:0,51,660	0/0:2,0:1:2.99:0,3,23
chr10	98629559	.	T	TGAGAGAGAGAGA	269.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.783;DP=908;FS=0.000;HRun=0;HaplotypeScore=313.5999;InbreedingCoeff=0.6965;MQ=55.16;MQ0=36;MQRankSum=-2.209;QD=14.19;ReadPosRankSum=-0.879;VQSLOD=1.5127;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:11.66:0,12,39	0/0:7,0:7:18.06:0,18,629	0/0:64,0:12:31.92:0,32,637	0/0:62,0:19:31.35:0,31,772	0/0:34,0:34:93.21:0,93,2900	0/0:32,0:32:84.29:0,84,2811	0/0:32,0:32:84.25:0,84,2797	0/0:37,0:26:20.84:0,21,1270	0/0:30,0:30:85.47:0,85,2418	0/0:49,0:49:99:0,135,4035	0/0:17,0:16:45.15:0,45,1517	0/0:46,0:46:99:0,135,4362	0/0:28,0:28:78.25:0,78,2722	0/0:29,0:28:69.43:0,69,2319	0/0:42,0:39:99:0,117,3648	1/1:3,13:19:8.84:352,9,0	0/0:35,0:35:94.81:0,95,3011	0/0:1,0:1:3.01:0,3,98	0/0:28,0:27:60.21:0,60,1900	0/0:28,0:28:74.82:0,75,2641	0/0:81,0:82:99:0,198,5516	0/0:43,0:42:99:0,111,3699	0/0:21,0:21:56.68:0,57,1767	0/0:56,0:56:99:0,153,4925	0/0:30,0:29:80.08:0,80,2723	0/0:18,0:18:42.18:0,42,710	0/0:21,0:20:57.14:0,57,1754	0/0:2,0:1:1.55:0,2,4
chr10	98629595	.	C	CAG	1486.30	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=0.926;DP=1010;FS=24.432;HRun=0;HaplotypeScore=150.8204;InbreedingCoeff=0.9070;MQ=66.84;MQ0=44;MQRankSum=-5.107;QD=17.91;ReadPosRankSum=-3.841;VQSLOD=1.4509;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,13:22:5.58:103,6,0	0/0:14,0:14:39.13:0,39,518	0/0:137,0:55:68.25:0,68,1215	0/0:151,0:53:66.62:0,67,972	0/0:30,0:30:78.23:0,78,1019	0/0:21,0:21:51.14:0,51,648	0/0:29,0:29:75.24:0,75,987	1/1:6,10:14:32.54:512,33,0	0/0:32,0:32:87.29:0,87,1157	0/0:41,0:41:99:0,102,1327	0/0:17,0:17:42.14:0,42,559	0/0:47,0:47:99:0,117,1556	0/0:23,0:23:57.19:0,57,758	0/0:24,0:24:69.08:0,69,918	0/0:43,0:43:99:0,117,1540	0/0:20,0:20:15.04:0,15,199	0/0:26,0:26:69.23:0,69,915	1/1:3,6:9:18.06:311,18,0	0/0:38,0:33:81.27:0,81,1076	0/0:32,0:32:84.26:0,84,1097	0/0:43,0:43:99:0,108,1394	0/0:31,0:30:81.25:0,81,1063	0/0:17,0:17:42.14:0,42,557	0/0:50,0:50:99:0,132,1756	0/0:34,0:34:93.31:0,93,1238	1/1:5,18:28:4.54:611,5,0	0/0:20,0:20:57.19:0,57,756	1/1:0,2:2:6.02:104,6,0
chr10	98629836	.	TCAGCCGAGAC	T	3141.80	PASS	AB=0.534;AC=6;AF=0.111;AN=54;BaseQRankSum=10.355;DP=665;FS=57.859;HRun=0;HaplotypeScore=198.8011;InbreedingCoeff=0.6539;MQ=89.63;MQ0=0;MQRankSum=-8.772;QD=51.50;ReadPosRankSum=-1.617;VQSLOD=1.0015;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:60.21:1849,60,0	0/0:7,0:7:18.06:0,18,845	0/0:30,0:30:81.23:0,81,3560	0/0:23,0:23:63.18:0,63,2834	0/0:32,0:32:78.17:0,78,3673	0/0:19,0:19:48.15:0,48,2414	0/0:27,0:27:81.26:0,81,4117	1/1:1,10:10:24.03:521,24,0	0/0:29,0:29:84.24:0,84,4013	0/0:47,0:47:99:0,132,5965	0/0:14,0:14:27.09:0,27,1433	0/0:26,0:26:72.23:0,72,3569	0/0:26,0:26:78.23:0,78,3576	0/0:21,0:21:60.16:0,60,2780	0/0:37,0:37:99:0,108,4955	0/0:23,0:23:63.20:0,63,2919	0/0:46,0:46:99:0,135,6881	0/1:1,5:6:7.96:288,0,8	0/0:16,0:16:39.08:0,39,1500	0/0:28,0:28:84.27:0,84,4195	0/0:33,0:33:99:0,99,5108	0/0:30,0:30:81.25:0,81,3931	0/0:11,0:11:24.08:0,24,1273	0/0:32,0:32:93.29:0,93,4433	0/0:23,0:23:51.18:0,51,2527	0/1:1,11:11:99:620,0,130	0/0:24,0:23:63.19:0,63,3104	./.
chr10	98629907	.	TCTCGGTGATGGGAGGAGCTGGATGGGGTACTTGGG	T	612.89	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=9.704;DP=759;FS=5.135;HRun=0;HaplotypeScore=582.6979;InbreedingCoeff=0.9914;MQ=75.78;MQ0=1;MQRankSum=-5.124;QD=9.15;ReadPosRankSum=-1.910;VQSLOD=-0.5760;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:15.57:129,16,0	0/0:11,0:11:21.02:0,21,475	0/0:39,0:31:62.39:0,62,909	0/0:29,0:21:40.20:0,40,750	0/0:22,0:22:57.05:0,57,1748	0/0:22,0:22:57.18:0,57,1788	0/0:30,0:30:90.20:0,90,2326	1/1:15,0:14:32.96:286,33,0	0/0:31,0:31:78.16:0,78,2444	0/0:36,0:36:99:0,108,3300	0/0:28,0:28:66.14:0,66,1667	0/0:32,0:32:84.11:0,84,2402	0/0:26,0:26:69.14:0,69,2029	0/0:18,0:18:51.13:0,51,1625	0/0:41,0:41:99:0,114,3559	0/0:21,0:21:39.04:0,39,1165	0/0:45,0:44:99:0,123,3913	1/1:15,0:15:18.50:171,19,0	0/0:24,0:22:59.23:0,59,1389	0/0:25,0:25:63.08:0,63,1613	0/0:60,0:59:99:0,165,5834	0/0:31,0:31:81.07:0,81,2137	0/0:15,0:15:37.89:0,38,1294	0/0:49,0:49:99:0,144,5110	0/0:24,0:24:56.99:0,57,1688	1/1:13,5:14:20.69:185,21,0	0/0:31,0:30:90.13:0,90,3050	./.
chr10	98631334	.	C	CAG	5760.05	PASS	AB=0.571;AC=9;AF=0.161;AN=56;BaseQRankSum=15.619;DP=761;FS=3.496;HRun=0;HaplotypeScore=134.0956;InbreedingCoeff=0.8664;MQ=86.04;MQ0=0;MQRankSum=-15.793;QD=46.83;ReadPosRankSum=-1.344;VQSLOD=5.1247;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:66.23:1331,66,0	0/0:9,0:9:27.09:0,27,441	0/0:33,0:33:93.10:0,93,1437	0/0:24,0:24:62.66:0,63,899	0/0:14,0:14:42.14:0,42,682	0/0:18,0:18:54.18:0,54,868	0/0:39,0:39:99:0,114,1848	1/1:12,18:30:75.22:1448,75,0	0/0:51,0:51:99:0,151,2425	0/0:24,0:24:72.25:0,72,1160	0/0:18,0:18:54.16:0,54,829	0/0:46,0:46:99:0,133,2098	0/0:19,0:19:54.18:0,54,872	0/0:28,0:28:84.29:0,84,1370	0/0:33,0:33:96.33:0,96,1562	0/0:28,0:28:84.27:0,84,1342	0/0:23,0:23:69.21:0,69,1095	1/1:3,24:27:69.22:1361,69,0	0/0:24,0:24:72.24:0,72,1134	0/0:18,0:18:54.16:0,54,833	0/0:73,0:73:99:0,217,3508	0/0:25,0:25:75.26:0,75,1223	0/0:13,0:13:39.13:0,39,628	0/0:37,0:37:99:0,111,1773	0/0:20,0:20:60.20:0,60,968	0/1:6,18:24:28.69:1195,0,29	0/0:21,0:21:60.20:0,60,971	1/1:0,7:7:21.07:425,21,0
chr10	98631353	.	CA	C	2883.09	PASS	AB=0.559;AC=9;AF=0.161;AN=56;BaseQRankSum=14.713;DP=773;FS=0.879;HRun=3;HaplotypeScore=118.6173;InbreedingCoeff=0.8654;MQ=88.82;MQ0=0;MQRankSum=-14.837;QD=27.20;ReadPosRankSum=-0.488;VQSLOD=2.8065;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:68.97:852,69,0	0/0:17,0:17:51.16:0,51,715	0/0:33,0:33:93.29:0,93,1289	0/0:30,0:30:84.70:0,85,1166	0/0:17,0:17:48.14:0,48,655	0/0:20,0:20:60.19:0,60,837	0/0:41,0:41:99:0,117,1643	1/1:1,27:28:72.23:891,72,0	0/0:44,0:44:99:0,132,1900	0/0:28,0:28:81.26:0,81,1136	0/0:19,0:19:57.18:0,57,803	0/0:44,0:44:99:0,132,1843	0/0:21,0:21:57.19:0,57,821	0/0:35,0:35:99:0,105,1452	0/0:35,0:35:96.32:0,96,1382	0/0:28,0:28:84.24:0,84,1186	0/0:22,0:22:66.20:0,66,928	1/1:6,17:23:48.11:577,48,0	0/0:22,0:22:66.20:0,66,916	0/0:20,0:20:54.17:0,54,761	0/0:73,0:73:99:0,214,3011	0/0:21,0:21:63.21:0,63,906	0/0:16,0:16:48.15:0,48,673	0/0:33,0:33:96.31:0,96,1360	0/0:28,0:28:81.26:0,81,1148	0/1:4,15:19:35.27:505,0,35	0/0:20,0:20:60.20:0,60,863	1/1:1,6:7:18.06:223,18,0
chr10	98631402	.	T	TG	4531.77	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.687;DP=811;FS=5.373;HRun=1;HaplotypeScore=99.4184;InbreedingCoeff=0.9990;MQ=89.03;MQ0=0;MQRankSum=-9.747;QD=40.83;ReadPosRankSum=-1.762;VQSLOD=4.2024;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:34:90.26:1322,90,0	0/0:18,0:18:51.17:0,51,661	0/0:27,0:27:72.18:0,72,861	0/0:34,0:34:95.65:0,96,1128	0/0:20,0:20:57.17:0,57,725	0/0:22,0:22:66.21:0,66,857	0/0:41,0:41:99:0,114,1466	1/1:3,23:26:75.22:1093,75,0	0/0:46,0:46:99:0,138,1788	0/0:27,0:27:78.24:0,78,994	0/0:18,0:18:54.18:0,54,699	0/0:51,0:51:99:0,153,1985	0/0:22,0:22:63.19:0,63,802	0/0:38,0:38:99:0,111,1441	0/0:37,0:37:99:0,111,1427	0/0:28,0:28:84.26:0,84,1077	0/0:23,0:23:66.21:0,66,856	1/1:0,21:21:63.21:943,63,0	0/0:27,0:27:81.25:0,81,1037	0/0:20,0:20:60.20:0,60,779	0/0:71,0:71:99:0,208,2685	0/0:19,0:19:57.19:0,57,740	0/0:15,0:15:45.15:0,45,584	0/0:33,0:33:93.30:0,93,1206	0/0:27,0:27:81.26:0,81,1052	1/1:2,20:22:60.14:866,60,0	0/0:36,0:36:99:0,108,1371	1/1:0,8:8:21.07:308,21,0
chr10	98631493	.	C	CA	5526.66	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.934;DP=821;FS=0.349;HRun=1;HaplotypeScore=91.0348;InbreedingCoeff=0.9962;MQ=90.18;MQ0=0;MQRankSum=-6.894;QD=40.34;ReadPosRankSum=-0.409;VQSLOD=4.8769;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,50:50:99:1966,132,0	0/0:12,0:12:36.12:0,36,467	0/0:29,0:29:81.26:0,81,1037	0/0:36,0:36:99:0,108,1372	0/0:27,0:27:81.25:0,81,1037	0/0:24,0:24:72.23:0,72,934	0/0:29,0:29:87.28:0,87,1128	1/1:2,29:31:87.26:1262,87,0	0/0:37,0:37:99:0,108,1387	0/0:37,0:37:99:0,105,1363	0/0:15,0:15:39.13:0,39,506	0/0:52,0:52:99:0,156,1995	0/0:25,0:25:75.24:0,75,973	0/0:26,0:26:72.23:0,72,935	0/0:39,0:39:99:0,114,1466	0/0:29,0:29:87.28:0,87,1129	0/0:40,0:40:99:0,117,1518	1/1:2,22:24:69.19:1009,69,0	0/0:19,0:19:51.13:0,51,621	0/0:22,0:22:63.20:0,63,817	0/0:46,0:46:99:0,138,1791	0/0:22,0:22:66.21:0,66,857	0/0:28,0:28:72.21:0,72,918	0/0:40,0:40:99:0,111,1441	0/0:23,0:23:66.21:0,66,857	1/1:4,23:27:39.29:1066,39,0	0/0:27,0:27:75.24:0,75,973	1/1:0,5:5:15.05:225,15,0
chr10	98631760	.	TTATATATACATG	T	2305.65	PASS	AB=0.832;AC=6;AF=0.107;AN=56;BaseQRankSum=6.169;DP=564;FS=16.194;HRun=0;HaplotypeScore=207.4865;InbreedingCoeff=0.2514;MQ=66.04;MQ0=2;MQRankSum=-5.522;QD=32.47;ReadPosRankSum=-1.781;VQSLOD=1.6554;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,2:15:39.15:39,0,53	0/0:13,0:13:39.11:0,39,1902	0/0:14,0:12:29.92:0,30,1228	0/0:21,0:13:39:0,39,1123	0/0:21,0:21:63.18:0,63,2907	0/0:27,0:27:72.23:0,72,3771	0/0:22,0:22:61.06:0,61,2624	1/1:3,19:21:60.17:1423,60,0	0/0:28,0:28:84.29:0,84,4270	0/0:25,0:25:75.25:0,75,3995	0/0:17,0:17:48.15:0,48,2291	0/0:28,0:28:84.27:0,84,4240	0/0:15,0:15:45.15:0,45,2136	0/0:22,0:22:66.23:0,66,3438	0/0:27,0:27:72.25:0,72,4097	0/0:14,0:14:15.94:0,16,518	0/0:19,0:19:51.18:0,51,2527	0/1:6,1:7:99:131,0,164	0/0:14,0:14:42.14:0,42,2010	0/0:25,0:25:68.83:0,69,2971	0/0:23,0:23:66.19:0,66,3179	0/0:15,0:15:42.14:0,42,2181	0/0:25,0:25:66.66:0,67,3175	0/0:18,0:18:42.13:0,42,2178	0/0:29,0:29:87.30:0,87,4874	0/1:17,3:20:99:605,0,311	0/0:31,0:31:90.31:0,90,4897	0/1:4,3:7:38.66:238,0,39
chr10	98631769	.	CATGTAT	C	1656.61	PASS	AB=0.889;AC=7;AF=0.125;AN=56;BaseQRankSum=9.405;DP=571;FS=22.257;HRun=0;HaplotypeScore=143.2690;InbreedingCoeff=0.7618;MQ=61.61;MQ0=3;MQRankSum=-7.259;QD=30.68;ReadPosRankSum=-0.287;VQSLOD=1.8634;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,4:12:2.25:0,2,21	0/0:13,0:13:39.13:0,39,1261	0/0:12,0:10:25.16:0,25,769	0/0:20,0:10:30.06:0,30,675	0/0:23,0:22:57.20:0,57,1928	0/0:25,0:25:69.24:0,69,2330	0/0:24,0:24:60.14:0,60,1957	1/1:21,1:21:31.43:771,31,0	0/0:29,0:29:84.29:0,84,2820	0/0:28,0:27:78.27:0,78,2683	0/0:16,0:16:45.14:0,45,1412	0/0:31,0:31:90.31:0,90,2992	0/0:15,0:15:45.14:0,45,1314	0/0:22,0:22:60.21:0,60,2048	0/0:28,0:28:58.44:0,58,2655	0/0:12,0:12:18.53:0,19,466	0/0:20,0:20:52.36:0,52,1457	0/1:7,0:8:20.56:160,0,21	0/0:16,0:16:42.14:0,42,1345	0/0:23,0:23:62.53:0,63,1811	0/0:22,0:22:63.22:0,63,2072	0/0:15,0:14:39.13:0,39,1340	0/0:25,0:25:63.69:0,64,2026	0/0:17,0:17:45.15:0,45,1506	0/0:34,0:34:99:0,102,3318	1/1:16,2:18:21.06:693,21,0	0/0:35,0:34:99:0,102,3422	1/1:6,0:6:8.67:175,9,0
chr10	98631770	.	ATG	A	1039.22	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.380;DP=568;FS=9.750;HRun=0;HaplotypeScore=101.1940;InbreedingCoeff=0.9281;MQ=61.57;MQ0=3;MQRankSum=-8.493;QD=18.89;ReadPosRankSum=-0.032;VQSLOD=3.5534;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,1:10:2.22:0,2,7	0/0:13,0:13:39.05:0,39,660	0/0:12,0:10:24.39:0,24,415	0/0:20,0:10:23.98:0,24,294	0/0:22,0:21:57.18:0,57,1005	0/0:26,0:26:71.44:0,71,1232	0/0:23,0:23:56.86:0,57,1007	1/1:21,1:21:36.04:360,36,0	0/0:28,0:28:84.29:0,84,1491	0/0:28,0:27:73.08:0,73,1362	0/0:16,0:16:41.35:0,41,708	0/0:31,0:31:90.12:0,90,1525	0/0:15,0:15:34.15:0,34,568	0/0:21,0:21:50.05:0,50,1059	0/0:28,0:28:81.02:0,81,1378	0/0:14,0:14:17.78:0,18,234	0/0:21,0:21:22.44:0,22,666	1/1:5,2:7:8.84:160,9,0	0/0:14,0:14:42.05:0,42,661	0/0:22,0:22:59.45:0,59,690	0/0:23,0:23:30.01:0,30,994	0/0:15,0:14:39.13:0,39,695	0/0:24,0:24:63.07:0,63,1018	0/0:17,0:17:44.98:0,45,750	0/0:34,0:34:99:0,102,1701	1/1:11,7:18:46.48:513,46,0	0/0:36,0:35:99:0,103,1693	1/1:7,1:8:14.96:160,15,0
chr10	98631775	.	TAC	T	356.19	PASS	AB=0.878;AC=7;AF=0.125;AN=56;BaseQRankSum=5.293;DP=628;FS=12.161;HRun=0;HaplotypeScore=110.0685;InbreedingCoeff=-0.1559;MQ=57.04;MQ0=3;MQRankSum=1.637;QD=2.49;ReadPosRankSum=0.571;VQSLOD=1.0668;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:1.61:0,2,42	0/0:14,0:14:6.29:0,6,326	0/0:15,0:9:3.48:0,3,47	0/0:20,0:9:6:0,6,69	0/0:24,0:23:48.09:0,48,663	0/0:25,0:26:34.02:0,34,673	0/0:25,0:25:39.11:0,39,573	0/0:35,0:33:35.88:0,36,226	0/0:30,0:30:66.17:0,66,943	0/0:29,2:29:11.55:0,12,593	0/1:16,1:16:0.97:1,0,399	0/0:33,0:33:66.17:0,66,928	0/1:12,2:14:68.50:69,0,204	0/0:21,0:21:30.57:0,31,682	0/0:30,2:32:4.08:0,4,877	0/0:10,0:18:14.75:0,15,136	0/1:17,1:18:49.67:50,0,417	0/0:13,0:13:24.92:0,25,241	0/1:13,2:15:47.07:47,0,182	0/1:11,13:24:15.42:277,0,15	0/0:24,0:24:41.88:0,42,600	0/0:16,0:16:24.07:0,24,343	0/0:20,3:23:14.07:0,14,612	0/1:18,1:19:0.99:1,0,377	0/0:30,2:32:7.12:0,7,989	0/0:25,0:25:37.65:0,38,254	0/1:32,4:35:26.87:27,0,932	0/0:11,0:11:11.86:0,12,87
chr10	98632775	.	GC	G	425.43	PASS	AB=0.514;AC=1;AF=0.018;AN=56;BaseQRankSum=4.104;DP=641;FS=2.365;HRun=1;HaplotypeScore=62.8065;InbreedingCoeff=0.3174;MQ=83.77;MQ0=0;MQRankSum=-3.081;QD=22.39;ReadPosRankSum=1.027;VQSLOD=3.7895;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:68.98:0,69,1103	0/0:10,0:10:27.09:0,27,418	0/0:18,0:18:50.77:0,51,751	0/0:22,0:22:63.21:0,63,977	0/0:17,0:17:48.16:0,48,762	0/0:14,0:14:42.13:0,42,641	0/0:26,0:26:75.24:0,75,1175	0/0:23,0:23:69.22:0,69,1061	0/0:21,0:21:63.20:0,63,979	0/0:29,0:29:87.28:0,87,1360	0/0:12,0:12:36.12:0,36,576	0/0:28,0:28:84.27:0,84,1314	0/0:17,0:17:51.17:0,51,815	0/0:28,0:28:84.28:0,84,1315	0/0:26,0:26:78.27:0,78,1235	0/1:1,18:19:5.82:500,0,6	0/0:48,0:48:99:0,141,2241	0/0:36,0:36:99:0,108,1723	0/0:28,0:28:84.26:0,84,1290	0/0:18,0:18:54.14:0,54,833	0/0:48,0:48:99:0,141,2203	0/0:17,0:17:48.16:0,48,755	0/0:7,0:7:21.07:0,21,336	0/0:28,0:28:84.25:0,84,1310	0/0:23,0:22:69.22:0,69,1080	0/0:31,0:31:93.29:0,93,1407	0/0:17,0:17:51.17:0,51,809	0/0:6,0:6:15.05:0,15,238
chr10	98633324	.	AAAAAATT	A	2977.85	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.857;DP=508;FS=12.538;HRun=0;HaplotypeScore=115.3597;InbreedingCoeff=0.9784;MQ=71.92;MQ0=2;MQRankSum=-10.467;QD=24.82;ReadPosRankSum=-1.359;VQSLOD=2.3893;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,1:31:17.98:234,18,0	0/0:4,0:4:12.04:0,12,395	0/0:30,0:16:42.09:0,42,954	0/0:15,0:10:10.63:0,11,246	0/0:22,0:22:66.23:0,66,2218	0/0:12,0:12:30.06:0,30,970	0/0:22,0:22:60.16:0,60,1587	1/1:16,9:25:57.11:971,57,0	0/0:15,0:15:45.15:0,45,1444	0/0:29,0:29:81.24:0,81,2583	0/0:18,0:18:51.16:0,51,1713	0/0:13,0:13:39.13:0,39,1312	0/0:10,0:10:30.10:0,30,986	0/0:14,0:14:42.14:0,42,1422	0/0:16,0:16:48.16:0,48,1510	1/1:14,0:14:30.03:357,30,0	0/0:30,0:30:87.25:0,87,2715	1/1:17,0:17:18.02:220,18,0	0/0:32,0:32:78.12:0,78,2457	0/0:17,0:17:48.12:0,48,1557	0/0:12,0:12:33.09:0,33,1007	0/0:13,0:13:39.13:0,39,1209	0/0:13,0:13:39.13:0,39,1155	0/0:18,0:18:51.16:0,51,1615	0/0:21,0:21:57.15:0,57,1681	1/1:1,21:22:57.15:1086,57,0	0/0:12,0:12:30.08:0,30,1018	1/1:0,11:11:15.05:296,15,0
chr10	98633325	.	AAAAATT	A	3070.68	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.471;DP=506;FS=12.606;HRun=0;HaplotypeScore=105.1475;InbreedingCoeff=0.9834;MQ=72.78;MQ0=2;MQRankSum=-10.440;QD=25.59;ReadPosRankSum=-1.314;VQSLOD=2.4985;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,26:31:18.06:327,18,0	0/0:4,0:4:12.04:0,12,343	0/0:32,0:17:45.03:0,45,873	0/0:15,0:10:14.77:0,15,239	0/0:22,0:22:66.23:0,66,1951	0/0:12,0:12:30.05:0,30,852	0/0:22,0:22:60.15:0,60,1390	1/1:23,2:25:57.15:903,57,0	0/0:16,0:16:48.16:0,48,1307	0/0:28,0:28:81.24:0,81,2265	0/0:17,0:17:51.18:0,51,1500	0/0:13,0:13:39.13:0,39,1141	0/0:10,0:10:30.10:0,30,868	0/0:14,0:14:42.14:0,42,1249	0/0:16,0:16:48.16:0,48,1316	1/1:5,9:14:30.10:562,30,0	0/0:30,0:30:87.25:0,87,2374	1/1:1,16:17:18.02:352,18,0	0/0:31,0:31:78.10:0,78,2143	0/0:17,0:17:48.11:0,48,1372	0/0:12,0:12:33.09:0,33,883	0/0:13,0:13:39.13:0,39,1062	0/0:13,0:13:39.13:0,39,1017	0/0:19,0:19:54.17:0,54,1478	0/0:20,0:20:57.15:0,57,1479	1/1:22,0:22:57.15:875,57,0	0/0:10,0:10:30.10:0,30,888	1/1:11,0:11:15.05:238,15,0
chr10	98633329	.	ATT	A	1974.04	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.723;DP=503;FS=10.789;HRun=2;HaplotypeScore=70.6779;InbreedingCoeff=0.9806;MQ=73.68;MQ0=2;MQRankSum=-9.904;QD=17.63;ReadPosRankSum=-1.785;VQSLOD=-0.3691;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:18.04:196,18,0	0/0:4,0:4:12.04:0,12,182	0/0:33,0:18:36.97:0,37,470	0/0:14,1:10:14.75:0,15,128	0/0:24,0:24:72.21:0,72,1047	0/0:10,0:10:30.10:0,30,455	0/0:22,0:22:66.08:0,66,920	1/1:16,7:23:63.11:722,63,0	0/0:16,0:16:47.92:0,48,663	0/0:31,0:31:93.31:0,93,1389	0/0:17,0:17:51.17:0,51,773	0/0:14,0:14:42.13:0,42,617	0/0:11,0:11:33.11:0,33,493	0/0:15,0:15:45.15:0,45,681	0/0:16,0:16:48.16:0,48,716	1/1:11,1:12:30.02:312,30,0	0/0:29,0:29:87.27:0,87,1263	1/1:16,0:16:18:177,18,0	0/0:26,0:26:78.24:0,78,1141	0/0:20,0:20:57.08:0,57,842	0/0:13,0:13:39.13:0,39,569	0/0:13,0:13:39.13:0,39,587	0/0:13,0:13:39.09:0,39,555	0/0:18,0:18:54.18:0,54,811	0/0:20,0:20:60.07:0,60,849	1/1:22,0:22:15.63:581,16,0	0/0:11,0:11:33.09:0,33,480	1/1:11,0:11:15.04:170,15,0
chr10	98634410	.	TA	T	1110.24	PASS	AB=0.916;AC=8;AF=0.154;AN=52;BaseQRankSum=10.516;DP=1036;FS=10.060;HRun=1;HaplotypeScore=167.8730;InbreedingCoeff=0.0190;MQ=49.78;MQ0=61;MQRankSum=-2.268;QD=4.24;ReadPosRankSum=-0.454;VQSLOD=-0.6952;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:35,4:34:99:150,0,220	0/0:20,1:21:34.26:0,34,502	./.	./.	0/0:33,0:31:36.11:0,36,527	0/0:25,0:25:54.64:0,55,924	0/0:29,1:28:27.36:0,27,518	0/0:34,0:29:47.83:0,48,1058	0/0:42,0:42:99:0,126,1946	0/1:60,0:50:3.97:4,0,1557	0/0:38,0:32:28.66:0,29,698	0/0:48,0:47:99:0,131,2011	0/0:42,0:42:99:0,103,1706	0/1:26,1:27:99:191,0,443	0/0:40,0:40:99:0,117,1762	0/1:43,5:43:99:104,0,297	0/0:30,0:29:69.59:0,70,819	1/1:15,3:18:1.32:127,1,0	0/0:26,0:17:31.49:0,31,496	0/0:35,0:35:70.90:0,71,859	0/0:48,2:45:87.90:0,88,1098	0/0:46,0:45:99:0,99,1481	0/0:30,0:29:50.87:0,51,710	0/0:54,0:53:99:0,137,2192	0/0:37,0:34:15.39:0,15,747	0/1:51,4:51:99:485,0,871	0/0:50,0:47:92.84:0,93,1384	0/1:11,4:12:99:176,0,141
chr10	98634411	.	AG	A	2129.97	PASS	AB=0.847;AC=16;AF=0.308;AN=52;BaseQRankSum=14.660;DP=1031;FS=1.983;HRun=2;HaplotypeScore=164.2184;InbreedingCoeff=-0.2934;MQ=49.68;MQ0=60;MQRankSum=-2.387;QD=3.87;ReadPosRankSum=-0.934;VQSLOD=0.0559;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,6:33:99:157,0,220	0/1:19,2:21:95.73:96,0,392	./.	./.	0/0:20,13:31:33.11:0,33,485	0/0:25,0:25:61.76:0,62,888	0/0:28,1:27:1.59:0,2,390	0/0:32,1:29:48.64:0,49,1088	0/0:41,0:41:99:0,123,1778	0/1:45,15:50:99:170,0,1383	0/1:31,7:32:24.71:25,0,611	0/0:47,0:47:99:0,112,1880	0/0:42,0:42:99:0,117,1629	0/0:26,0:26:12.94:0,13,446	0/0:39,0:39:99:0,114,1659	0/1:31,14:42:99:352,0,260	0/1:25,5:29:68.14:68,0,667	1/1:15,4:19:11.58:185,12,0	0/1:25,1:17:38.23:38,0,423	0/1:31,3:34:49.68:50,0,679	0/1:43,7:45:99:205,0,870	0/0:45,0:44:93.30:0,93,1352	0/1:28,3:30:23.11:23,0,628	0/0:54,2:55:99:0,142,2111	0/1:24,13:34:97.48:97,0,643	0/1:31,24:51:99:502,0,830	0/1:44,6:47:99:186,0,1130	0/1:12,3:12:99:131,0,141
chr10	98634450	.	A	ATAGG	2619.21	PASS	AB=0.856;AC=5;AF=0.089;AN=56;BaseQRankSum=8.590;DP=977;FS=7.577;HRun=0;HaplotypeScore=175.6302;InbreedingCoeff=0.2888;MQ=52.39;MQ0=60;MQRankSum=-1.118;QD=18.84;ReadPosRankSum=1.490;VQSLOD=2.6964;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:37:99:522,0,293	0/0:18,0:18:48.62:0,49,845	0/0:30,0:7:0.15:0,0,144	0/0:39,0:5:11.95:0,12,99	0/0:24,0:22:63.18:0,63,1074	0/0:28,0:28:73.60:0,74,1322	0/0:29,0:28:66.19:0,66,1050	0/0:28,0:17:35.20:0,35,357	0/0:47,0:47:99:0,138,2355	0/0:44,0:41:91.89:0,92,1750	0/0:30,0:29:20.33:0,20,1150	0/0:43,0:42:99:0,120,2174	0/0:34,0:34:99:0,99,1742	0/1:27,0:27:99:102,0,371	0/0:50,0:50:99:0,147,2657	1/1:42,5:44:99:1988,118,0	0/0:32,0:32:84.24:0,84,1444	0/1:6,17:25:44.73:131,0,45	0/0:19,0:15:30.08:0,30,547	0/0:30,0:29:66.60:0,67,1164	0/0:57,0:53:99:0,147,2538	0/0:36,0:36:81.27:0,81,1463	0/0:25,0:25:38.21:0,38,1035	0/0:54,0:53:99:0,147,2635	0/0:34,0:33:85.52:0,86,1508	0/0:42,0:37:93.39:0,93,1034	0/0:50,0:50:99:0,138,2377	0/0:15,0:12:26.07:0,26,242
chr10	98634574	.	ATAGG	A	65.47	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=5.622;DP=1025;FS=0.000;HRun=0;HaplotypeScore=166.8230;InbreedingCoeff=0.5131;MQ=53.42;MQ0=48;MQRankSum=-3.830;QD=1.60;ReadPosRankSum=-1.478;VQSLOD=2.3696;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:25:55.68:0,56,765	0/0:12,0:11:29.46:0,29,503	0/0:32,0:2:6.02:0,6,83	0/0:22,0:6:8.14:0,8,266	0/0:27,0:26:53.76:0,54,812	0/0:28,0:28:71.55:0,72,1175	0/0:34,0:31:84.09:0,84,1284	0/0:38,0:32:51.36:0,51,988	0/0:52,0:51:99:0,153,2839	0/0:67,0:62:99:0,162,2671	0/0:39,0:36:96.30:0,96,1556	0/0:45,0:45:99:0,110,2105	0/0:45,0:45:99:0,129,2387	0/0:48,0:48:99:0,120,2115	0/0:57,0:57:99:0,156,2637	1/1:1,24:25:8.07:130,8,0	0/0:35,0:35:90.87:0,91,1780	0/0:30,0:30:73.73:0,74,1043	0/0:26,0:20:48.11:0,48,839	0/0:27,0:26:69.18:0,69,1139	0/0:61,0:59:99:0,147,2483	0/0:38,0:37:86.11:0,86,1489	0/0:27,0:25:63.17:0,63,988	0/0:47,0:47:99:0,120,2204	0/0:36,0:35:92.35:0,92,1633	0/0:47,0:46:87.44:0,87,1721	0/0:36,0:35:99:0,102,1792	0/1:16,0:15:31.80:32,0,379
chr10	98634777	.	GGATAGGTA	G	2497.22	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.832;DP=1070;FS=2.204;HRun=0;HaplotypeScore=273.4157;InbreedingCoeff=0.9339;MQ=57.11;MQ0=2;MQRankSum=5.389;QD=24.01;ReadPosRankSum=-4.217;VQSLOD=2.1043;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,108,3017	0/0:23,0:23:60.19:0,60,1834	0/0:42,0:22:25.61:0,26,381	0/0:44,0:32:68.81:0,69,1051	0/0:20,0:20:45.15:0,45,1574	0/0:41,0:41:99:0,100,3629	0/0:29,0:29:72.16:0,72,2006	1/1:13,39:52:99:1313,114,0	0/0:43,0:43:99:0,111,3464	0/0:50,0:50:99:0,117,3224	0/0:30,0:28:63.19:0,63,1736	0/0:47,0:47:99:0,111,3730	0/0:48,0:48:99:0,126,4347	0/0:36,0:36:84.09:0,84,2329	0/0:48,0:48:99:0,117,3788	0/0:47,0:47:99:0,123,3924	0/0:32,0:32:69.12:0,69,2021	0/0:37,0:37:93.27:0,93,2847	0/0:22,0:20:33.10:0,33,951	0/0:31,0:31:69.20:0,69,2108	0/0:58,0:58:99:0,111,3332	0/0:35,0:35:69.17:0,69,2178	0/0:40,0:40:66.17:0,66,2149	0/0:42,0:42:99:0,102,2989	0/0:36,0:35:71.95:0,72,2222	1/1:11,27:38:72.13:1238,72,0	0/0:32,0:32:90.20:0,90,2650	1/1:6,8:14:3.01:79,3,0
chr10	98635158	.	G	GCTGCCTGGA	17309.81	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-6.013;DP=704;FS=0.000;HRun=0;HaplotypeScore=180.2670;InbreedingCoeff=0.9900;MQ=90.24;MQ0=0;MQRankSum=-15.671;QD=109.56;ReadPosRankSum=-1.259;VQSLOD=4.5491;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,18:38:90.26:3862,90,0	0/0:11,0:11:33.11:0,33,966	0/0:26,0:26:69.18:0,69,1905	0/0:34,0:35:81.04:0,81,2296	0/0:13,0:13:33.11:0,33,1010	0/0:17,0:17:51.18:0,51,1544	0/0:30,0:30:87.30:0,87,2642	1/1:15,12:31:87.26:3656,87,0	0/0:25,0:25:69.19:0,69,1974	0/0:23,0:23:57.19:0,57,1609	0/0:10,0:10:30.10:0,30,892	0/0:22,0:22:66.21:0,66,1867	0/0:42,0:42:99:0,120,3468	0/0:31,0:31:87.30:0,87,2580	0/0:36,0:36:99:0,102,3098	1/1:9,13:23:57.20:2691,57,0	0/0:19,0:19:54.19:0,54,1654	1/1:3,6:13:21.07:1019,21,0	0/0:18,0:18:45.15:0,45,1302	0/0:17,0:17:51.18:0,51,1520	0/0:52,0:52:99:0,154,4602	0/0:22,0:22:63.19:0,63,1767	0/0:17,0:17:45.15:0,45,1335	0/0:31,0:31:87.30:0,87,2647	0/0:25,0:25:72.22:0,72,1988	1/1:10,24:34:10.40:4052,10,0	0/0:24,0:24:72.25:0,72,2141	1/1:1,14:14:42.14:2030,42,0
chr10	98635799	.	A	AT	2764.82	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-10.861;DP=700;FS=3.853;HRun=6;HaplotypeScore=67.8380;InbreedingCoeff=0.9881;MQ=67.34;MQ0=0;MQRankSum=0.243;QD=29.41;ReadPosRankSum=-1.200;VQSLOD=3.9423;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,153,1541	0/0:9,0:9:27.06:0,27,275	0/0:20,0:20:38.56:0,39,420	0/0:21,0:21:18.87:0,19,355	0/0:23,0:23:66.13:0,66,665	0/0:27,0:27:81.18:0,81,826	0/0:26,0:26:72.16:0,72,734	1/1:4,28:32:66.10:956,66,0	0/0:18,0:18:54.12:0,54,550	0/0:28,0:28:69.14:0,69,697	0/0:22,0:22:63.14:0,63,642	0/0:18,0:18:45.10:0,45,459	0/0:27,0:27:64.86:0,65,717	0/0:18,0:18:54.12:0,54,546	0/0:21,0:21:57.09:0,57,570	1/1:5,15:20:11.52:460,12,0	0/0:34,0:34:93.21:0,93,949	0/0:26,1:27:40.43:0,40,727	0/0:23,0:23:60.13:0,60,611	0/0:32,0:32:75.13:0,75,757	0/0:33,0:33:87.19:0,87,887	0/0:23,0:23:63.13:0,63,636	0/0:21,0:21:57.12:0,57,581	0/0:25,0:25:69.09:0,69,680	0/0:20,0:20:54.12:0,54,551	1/1:2,27:29:81.26:1015,81,0	0/0:36,0:35:99:0,105,1063	1/1:0,13:13:39.12:490,39,0
chr10	98637065	.	TTGGTGCACATCTGTAATCACAGCC	T	90.99	PASS	AB=0.931;AC=7;AF=0.318;AN=22;BaseQRankSum=3.146;DP=594;FS=6.284;HRun=0;HaplotypeScore=36.2414;InbreedingCoeff=0.2830;MQ=15.69;MQ0=266;MQRankSum=2.213;QD=0.71;ReadPosRankSum=-1.644;VQSLOD=-0.1238;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:7:2.94:18,3,0	./.	./.	./.	./.	./.	./.	./.	./.	0/0:20,0:7:20.26:0,20,195	./.	0/0:24,0:11:6.02:0,6,70	0/1:15,0:6:0:0,0,0	0/0:17,0:10:3:0,3,35	./.	0/0:20,0:10:5.93:0,6,53	./.	1/1:17,0:7:5.92:39,6,0	./.	0/1:27,0:15:0:0,0,0	./.	./.	./.	0/0:24,0:5:3.01:0,3,35	./.	0/1:20,7:18:99:121,0,344	0/0:21,0:16:2.77:0,3,18	./.
chr10	98637587	.	AGCGTGT	A	1794.85	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.606;DP=635;FS=2.264;HRun=0;HaplotypeScore=136.0311;InbreedingCoeff=0.9589;MQ=73.00;MQ0=1;MQRankSum=-6.682;QD=28.04;ReadPosRankSum=-1.322;VQSLOD=3.0017;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.18:0,57,1694	0/0:7,0:7:12.04:0,12,306	0/0:17,0:15:30.08:0,30,567	0/0:31,0:28:45.15:0,45,1107	0/0:17,0:17:36.12:0,36,1091	0/0:11,0:11:27.09:0,27,812	0/0:33,0:33:75.26:0,75,2306	1/1:15,3:18:21.04:362,21,0	0/0:12,0:12:30.10:0,30,950	0/0:26,0:26:57.20:0,57,1465	0/0:18,0:18:29.89:0,30,942	0/0:26,0:26:60.21:0,60,1776	0/0:15,0:15:33.11:0,33,1031	0/0:31,0:31:78.23:0,78,2276	0/0:20,0:20:54.17:0,54,1614	1/1:8,11:18:24.04:411,24,0	0/0:30,0:30:69.24:0,69,2124	0/0:24,0:24:57.20:0,57,1755	0/0:17,0:17:39.12:0,39,940	0/0:23,0:23:48.16:0,48,1588	0/0:73,0:73:99:0,169,5031	0/0:22,0:22:48.16:0,48,1436	0/0:20,0:20:42.12:0,42,1172	0/0:31,0:31:75.26:0,75,2293	0/0:22,0:22:30.10:0,30,911	1/1:8,15:23:51.17:1050,51,0	0/0:24,0:24:54.18:0,54,1655	1/1:0,4:4:6.02:125,6,0
chr10	98637632	.	ATG	A	1419.25	PASS	AB=0.928;AC=16;AF=0.286;AN=56;BaseQRankSum=11.324;DP=768;FS=4.913;HRun=0;HaplotypeScore=97.2029;InbreedingCoeff=0.2504;MQ=55.52;MQ0=12;MQRankSum=-2.216;QD=4.84;ReadPosRankSum=-0.483;VQSLOD=2.3444;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:75.13:0,75,1099	0/0:7,0:7:17.27:0,17,244	0/0:50,0:10:9.03:0,9,125	0/0:49,0:9:6.01:0,6,71	0/0:20,0:20:57.19:0,57,912	0/0:21,0:21:63.20:0,63,988	0/0:43,2:46:39.03:0,39,1565	1/1:14,13:29:41.60:417,42,0	0/1:20,2:22:12.15:12,0,803	0/1:25,3:28:39.23:39,0,832	0/0:20,0:20:48.11:0,48,732	0/0:26,1:27:9.91:0,10,783	0/1:25,1:26:20.41:20,0,789	0/1:23,2:25:6.13:6,0,891	0/0:21,0:22:31.03:0,31,658	1/1:6,0:20:22.73:111,23,0	0/0:30,0:30:63.21:0,63,1000	0/0:23,0:23:21.05:0,21,681	0/1:20,1:20:3.08:3,0,449	0/1:23,2:25:18.18:18,0,715	0/0:61,3:64:20.94:0,21,1802	0/0:19,0:19:42.13:0,42,646	0/0:19,2:20:2.97:0,3,516	0/1:34,5:39:48.36:48,0,1215	0/0:22,1:23:20.99:0,21,778	1/1:13,22:36:77.16:833,77,0	0/1:17,1:17:45.21:45,0,310	1/1:0,1:2:3.01:36,3,0
chr10	98642103	.	AGTGGTGGTGGTGGTGGTGGTGGTGGTG	A	668.43	PASS	AB=0.952;AC=9;AF=0.173;AN=52;BaseQRankSum=5.931;DP=356;FS=1.357;HRun=0;HaplotypeScore=186.7264;InbreedingCoeff=0.3979;MQ=54.11;MQ0=22;MQRankSum=-1.662;QD=6.89;ReadPosRankSum=0.749;VQSLOD=2.4891;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:2.13:5,2,0	0/0:4,0:4:6.02:0,6,136	0/0:42,0:4:1.55:0,2,4	0/1:50,0:14:1.78:2,0,39	0/0:4,0:4:6.02:0,6,235	0/0:12,0:12:9.03:0,9,175	0/0:22,0:22:33.09:0,33,683	./.	0/0:12,0:13:18.06:0,18,435	0/0:7,0:7:9.03:0,9,350	0/0:2,0:2:3.01:0,3,95	0/0:6,0:6:9.03:0,9,158	0/0:7,0:7:6.02:0,6,141	0/0:7,0:6:9.03:0,9,190	0/0:13,0:13:15.05:0,15,401	0/1:8,0:8:4.04:254,0,4	0/0:9,0:9:9.03:0,9,186	0/1:10,0:12:29.08:29,0,91	0/0:17,0:15:11.07:0,11,130	./.	0/0:41,0:41:51.16:0,51,1072	0/0:9,0:9:9.03:0,9,264	0/0:5,0:5:6.02:0,6,95	0/0:17,0:17:24.49:0,24,635	0/0:7,0:7:11.99:0,12,402	1/1:7,7:14:17.97:258,18,0	0/0:4,0:4:9.03:0,9,179	1/1:6,0:6:9.02:249,9,0
chr10	98642174	.	G	GGGT	285.78	PASS	AB=0.875;AC=2;AF=0.043;AN=46;BaseQRankSum=2.978;DP=347;FS=7.789;HRun=0;HaplotypeScore=55.5637;InbreedingCoeff=0.1523;MQ=48.60;MQ0=14;MQRankSum=-1.230;QD=4.14;ReadPosRankSum=0.775;VQSLOD=0.0993;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:7:3.01:0,3,44	./.	0/1:53,0:4:0:0,0,0	0/0:37,0:5:3.48:0,3,43	./.	0/0:9,0:7:12.04:0,12,161	0/0:12,0:12:30.06:0,30,394	0/0:15,0:12:18.06:0,18,247	0/0:15,0:15:36.12:0,36,524	./.	./.	0/0:17,0:16:32.90:0,33,478	0/0:10,0:9:14.92:0,15,190	0/0:9,0:9:15.05:0,15,218	0/0:4,0:4:6.02:0,6,87	0/1:10,5:15:16.58:358,0,17	0/0:10,0:10:21.02:0,21,263	0/0:5,0:5:6.02:0,6,74	0/0:11,0:8:8.02:0,8,151	0/0:2,0:2:3.01:0,3,44	0/0:52,0:49:51.36:0,51,680	0/0:5,0:5:0:0,0,0	0/0:1,0:1:3.01:0,3,44	0/0:15,0:14:23.91:0,24,347	./.	0/0:13,0:13:24.08:0,24,349	0/0:5,0:5:9.03:0,9,131	0/0:4,0:4:3.01:0,3,39
chr10	98642230	.	ATGG	A	850.48	PASS	AB=0.725;AC=6;AF=0.120;AN=50;BaseQRankSum=5.532;DP=462;FS=2.888;HRun=0;HaplotypeScore=77.0094;InbreedingCoeff=0.5149;MQ=51.86;MQ0=24;MQRankSum=-3.331;QD=19.33;ReadPosRankSum=0.332;VQSLOD=2.8311;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:13:24.08:0,24,448	0/0:4,0:4:6.02:0,6,110	0/0:33,0:4:7.82:0,8,157	0/0:25,1:8:15.80:0,16,235	./.	0/0:18,0:13:33.03:0,33,584	0/0:21,0:21:54.17:0,54,1038	0/1:6,5:6:26.79:158,0,27	0/0:27,0:26:60.21:0,60,1157	0/0:9,0:7:15.04:0,15,234	./.	0/0:21,0:21:42.10:0,42,772	0/0:12,0:12:30.10:0,30,580	0/0:16,0:16:42.13:0,42,809	0/0:6,0:6:18.06:0,18,367	1/1:3,9:12:36.10:498,36,0	0/0:16,0:16:44.98:0,45,862	0/0:12,0:12:32.94:0,33,585	0/0:13,0:10:15.05:0,15,297	./.	0/0:97,0:89:99:0,189,3503	0/0:4,0:2:6.02:0,6,122	0/0:2,0:2:3.01:0,3,61	0/0:45,0:45:99:0,105,2003	0/0:10,0:8:20.90:0,21,350	0/1:11,5:14:1.74:273,0,2	0/0:5,0:5:15.05:0,15,293	1/1:0,5:5:3.01:43,3,0
chr10	98642337	.	AGTG	A	912.58	PASS	AB=0.688;AC=7;AF=0.125;AN=56;BaseQRankSum=5.801;DP=630;FS=9.959;HRun=0;HaplotypeScore=88.9573;InbreedingCoeff=0.6570;MQ=52.28;MQ0=19;MQRankSum=0.647;QD=17.89;ReadPosRankSum=-0.470;VQSLOD=2.7225;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:60.19:0,60,1167	0/0:6,0:6:12.04:0,12,238	0/0:50,0:16:24.04:0,24,376	0/0:45,0:22:42.07:0,42,663	0/0:7,0:7:6.02:0,6,122	0/0:16,0:15:24.08:0,24,488	0/0:28,0:28:51.12:0,51,963	1/1:9,9:15:21.07:302,21,0	0/0:27,0:26:72.25:0,72,1459	0/0:11,0:11:18.06:0,18,351	0/0:6,0:6:9.03:0,9,184	0/0:26,0:26:54.16:0,54,1010	0/0:26,0:24:63.22:0,63,1249	0/0:37,0:36:63.20:0,63,1243	0/0:21,0:21:51.18:0,51,1024	1/1:3,12:15:36.12:510,36,0	0/0:14,0:14:36.12:0,36,733	0/0:21,0:22:39.08:0,39,753	0/0:16,0:13:18.06:0,18,367	0/0:8,0:8:12.04:0,12,210	0/0:71,0:66:75.31:0,75,2108	0/0:7,0:6:12.04:0,12,242	0/0:4,0:4:3.01:0,3,61	0/0:83,0:83:99:0,208,3963	0/0:8,0:8:9.03:0,9,183	0/1:6,5:11:49.15:117,0,49	0/0:6,0:6:15.05:0,15,306	1/1:4,3:6:4.25:123,4,0
chr10	98644415	.	ACT	A	644.70	PASS	AB=0.835;AC=3;AF=0.054;AN=56;BaseQRankSum=9.205;DP=806;FS=0.000;HRun=0;HaplotypeScore=106.3518;InbreedingCoeff=-0.0565;MQ=85.24;MQ0=1;MQRankSum=-7.721;QD=10.75;ReadPosRankSum=-1.251;VQSLOD=2.7653;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,2633	0/0:12,0:12:36.12:0,36,681	0/0:22,0:22:63.17:0,63,1053	0/0:31,0:31:84.72:0,85,1465	0/0:36,0:36:99:0,108,2073	0/0:29,0:29:84.29:0,84,1622	0/0:22,0:22:66.23:0,66,1275	0/1:16,9:25:99:277,0,755	0/0:24,0:24:72.25:0,72,1390	0/0:25,0:25:75.26:0,75,1447	0/0:25,0:25:75.26:0,75,1440	0/0:30,0:30:87.30:0,87,1666	0/0:27,0:27:75.24:0,75,1402	0/0:24,0:24:72.24:0,72,1359	0/0:35,0:35:99:0,105,2027	0/0:34,0:34:99:0,99,1846	0/0:36,0:36:99:0,108,2073	0/0:19,0:19:57.20:0,57,1099	0/0:29,0:29:81.28:0,81,1522	0/0:27,0:27:81.26:0,81,1519	0/0:57,0:56:99:0,169,3211	0/0:28,0:28:84.25:0,84,1554	0/0:22,0:22:66.23:0,66,1274	0/0:49,0:49:99:0,144,2719	0/0:25,0:25:75.22:0,75,1371	0/1:21,9:30:99:443,0,381	0/0:31,0:30:93.31:0,93,1754	0/1:5,0:5:24.90:25,0,101
chr10	98644423	.	TACC	T	266.80	PASS	AB=0.673;AC=2;AF=0.036;AN=56;BaseQRankSum=5.437;DP=796;FS=2.040;HRun=0;HaplotypeScore=123.9525;InbreedingCoeff=-0.0370;MQ=85.02;MQ0=1;MQRankSum=-5.834;QD=7.41;ReadPosRankSum=1.849;VQSLOD=2.8728;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,2611	0/0:13,0:13:39.13:0,39,898	0/0:23,0:23:63.20:0,63,1367	0/0:29,0:29:80.08:0,80,1703	0/0:34,0:34:99:0,102,2305	0/0:26,0:26:78.27:0,78,1798	0/0:24,0:24:72.25:0,72,1636	0/0:26,0:26:47.67:0,48,1025	0/0:22,0:22:66.23:0,66,1521	0/0:23,0:23:60.21:0,60,1361	0/0:26,0:26:75.26:0,75,1688	0/0:31,0:31:90.31:0,90,2075	0/0:24,0:24:69.24:0,69,1561	0/0:22,0:22:63.20:0,63,1384	0/0:38,0:38:99:0,108,2486	0/0:32,0:32:93.32:0,93,2145	0/0:34,0:34:99:0,102,2304	0/0:22,0:22:63.22:0,63,1453	0/0:25,0:25:69.24:0,69,1590	0/0:26,0:26:75.26:0,75,1709	0/0:62,0:61:99:0,178,4051	0/0:29,0:29:84.29:0,84,1912	0/0:20,0:20:60.19:0,60,1314	0/0:51,0:51:99:0,144,3287	0/0:25,0:25:72.25:0,72,1657	0/1:19,12:31:99:289,0,545	0/0:31,0:30:90.30:0,90,2031	0/1:2,3:5:48.06:67,0,48
chr10	98644429	.	TCCAGGTACC	T	1259.80	PASS	AB=0.802;AC=3;AF=0.054;AN=56;BaseQRankSum=9.509;DP=797;FS=2.262;HRun=0;HaplotypeScore=223.5458;InbreedingCoeff=-0.0566;MQ=86.00;MQ0=1;MQRankSum=-7.529;QD=19.09;ReadPosRankSum=0.755;VQSLOD=3.0875;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,4968	0/0:13,0:13:39.13:0,39,1704	0/0:24,0:24:69.24:0,69,2078	0/0:31,0:31:88.18:0,88,2972	0/0:35,0:35:99:0,105,4602	0/0:28,0:28:84.27:0,84,3484	0/0:26,0:26:78.27:0,78,2900	0/1:30,0:30:94.56:95,0,226	0/0:22,0:22:66.21:0,66,3058	0/0:21,0:21:63.21:0,63,2455	0/0:26,0:26:78.26:0,78,2895	0/0:31,0:31:93.31:0,93,3655	0/0:24,0:24:69.24:0,69,2608	0/0:22,0:22:66.22:0,66,2752	0/0:40,0:40:99:0,120,5031	0/0:32,0:32:96.27:0,96,3343	0/0:35,0:35:99:0,105,4285	0/0:21,0:21:63.17:0,63,2616	0/0:24,0:24:72.24:0,72,2676	0/0:26,0:26:75.26:0,75,3470	0/0:62,0:61:99:0,184,7466	0/0:31,0:31:87.28:0,87,3539	0/0:18,0:18:54.17:0,54,2532	0/0:48,0:48:99:0,138,6160	0/0:23,0:23:69.24:0,69,3076	0/1:17,12:29:87.90:1066,0,88	0/0:32,0:31:96.33:0,96,4165	0/1:4,3:7:53.39:199,0,53
chr10	98646000	.	G	GAC	887.93	PASS	AB=0.839;AC=10;AF=0.179;AN=56;BaseQRankSum=9.821;DP=777;FS=2.115;HRun=0;HaplotypeScore=128.3318;InbreedingCoeff=0.7151;MQ=64.47;MQ0=7;MQRankSum=-2.424;QD=5.58;ReadPosRankSum=-0.902;VQSLOD=3.3115;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:39:18.90:159,19,0	0/0:11,0:11:23.50:0,23,303	0/0:44,0:30:52.01:0,52,706	0/0:37,0:28:35.20:0,35,484	0/0:20,0:20:49.35:0,49,614	0/0:21,0:21:60.20:0,60,789	0/0:37,0:37:82.48:0,82,1059	1/1:32,0:30:6.89:55,7,0	0/0:33,0:33:75.15:0,75,910	0/0:32,0:32:81.23:0,81,1034	0/0:20,0:20:48.14:0,48,606	0/0:25,0:25:75.24:0,75,973	0/0:16,0:16:41.93:0,42,486	0/0:31,0:31:82.48:0,82,1011	0/0:29,0:29:70.46:0,70,899	1/1:36,0:36:51.38:572,51,0	0/0:38,0:37:88.12:0,88,1104	0/1:11,9:20:41.15:138,0,41	0/0:27,0:26:51.12:0,51,648	0/0:25,0:25:51.93:0,52,633	0/0:43,0:41:84.32:0,84,1262	0/0:26,0:26:58.40:0,58,739	0/0:19,0:19:41.34:0,41,512	0/0:41,0:41:99:0,99,1295	0/0:25,0:25:63.18:0,63,804	0/1:23,0:23:43.82:44,0,66	0/0:18,0:18:51.09:0,51,626	1/1:7,0:7:9.47:80,9,0
chr10	98646034	.	C	CAT	1910.23	PASS	AB=0.898;AC=8;AF=0.143;AN=56;BaseQRankSum=10.767;DP=826;FS=4.059;HRun=0;HaplotypeScore=125.3556;InbreedingCoeff=0.4335;MQ=61.36;MQ0=12;MQRankSum=1.804;QD=10.33;ReadPosRankSum=1.177;VQSLOD=3.0874;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:37:0.73:1,0,193	0/0:17,0:17:48.04:0,48,578	0/0:31,0:18:50.95:0,51,473	0/0:46,0:28:59.48:0,59,595	0/0:23,0:23:41.17:0,41,648	0/0:27,0:27:75.04:0,75,875	0/0:33,0:33:63.04:0,63,873	0/1:30,0:27:39.16:407,0,39	0/0:28,0:28:81.07:0,81,988	0/0:34,0:34:96.11:0,96,1117	0/0:18,0:18:44.92:0,45,497	0/0:22,0:22:66.01:0,66,760	0/0:21,0:21:62.97:0,63,689	0/0:36,0:36:80.13:0,80,1073	0/0:30,0:30:60.25:0,60,925	1/1:5,34:40:31.18:954,31,0	0/0:35,0:34:95.13:0,95,1006	0/1:24,0:22:19.95:20,0,276	0/0:27,0:27:71.70:0,72,620	0/0:29,0:29:42.08:0,42,681	0/0:56,0:53:99:0,144,1575	0/0:22,0:22:24.67:0,25,469	0/0:20,0:20:30.89:0,31,503	0/0:39,0:39:93.31:0,93,1210	0/0:24,0:24:66.11:0,66,831	0/1:12,0:39:99:568,0,194	0/0:23,0:23:68.89:0,69,711	1/1:3,0:14:9.02:98,9,0
chr10	98646821	.	GT	G	1221.81	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.896;DP=555;FS=2.580;HRun=8;HaplotypeScore=70.7413;InbreedingCoeff=0.9896;MQ=73.72;MQ0=0;MQRankSum=-3.414;QD=19.39;ReadPosRankSum=-0.962;VQSLOD=3.3588;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,128,1512	0/0:11,0:11:30.09:0,30,357	0/0:21,0:20:49.66:0,50,542	0/0:13,0:12:13.25:0,13,317	0/0:20,0:20:51.15:0,51,616	0/0:17,0:17:48.15:0,48,579	0/0:20,0:20:60.18:0,60,725	1/1:7,23:30:57.46:534,57,0	0/0:21,0:21:63.17:0,63,738	0/0:23,0:23:63.18:0,63,751	0/0:19,0:19:51.16:0,51,616	0/0:20,0:20:60.18:0,60,725	0/0:12,0:12:36.06:0,36,417	0/0:14,0:14:36.09:0,36,414	0/0:13,0:13:36.11:0,36,435	0/0:14,0:14:42.12:0,42,497	0/0:34,0:34:90.21:0,90,1046	0/0:27,0:27:78.24:0,78,942	0/0:22,0:22:60.17:0,60,715	0/0:14,0:14:39.12:0,39,471	0/0:25,0:25:63.18:0,63,749	0/0:18,0:18:51.16:0,51,611	0/0:15,0:15:42.13:0,42,507	0/0:13,0:13:36.11:0,36,435	0/0:12,0:12:21.07:0,21,318	1/1:2,20:22:57.04:541,57,0	0/0:26,0:26:72.19:0,72,846	1/1:0,11:11:30.05:290,30,0
chr10	98647353	.	TA	T	3758.81	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.249;DP=737;FS=5.616;HRun=2;HaplotypeScore=90.0696;InbreedingCoeff=0.9999;MQ=88.84;MQ0=0;MQRankSum=-5.511;QD=37.59;ReadPosRankSum=-0.209;VQSLOD=3.7916;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,2048	0/0:13,0:13:39.13:0,39,584	0/0:30,0:30:83.84:0,84,1237	0/0:26,0:26:63.18:0,63,901	0/0:27,0:27:81.27:0,81,1212	0/0:18,0:18:48.16:0,48,715	0/0:35,0:35:99:0,102,1527	1/1:0,27:27:81.25:1034,81,0	0/0:29,0:29:84.25:0,84,1233	0/0:25,0:25:72.24:0,72,1062	0/0:11,0:11:33.11:0,33,494	0/0:19,0:19:54.18:0,54,801	0/0:18,0:18:54.18:0,54,803	0/0:22,0:22:66.18:0,66,942	0/0:27,0:27:78.25:0,78,1148	1/1:0,23:23:66.21:856,66,0	0/0:31,0:31:93.31:0,93,1389	0/0:28,0:28:84.24:0,84,1225	0/0:23,0:23:69.23:0,69,1029	0/0:23,0:23:66.22:0,66,989	0/0:47,0:47:99:0,141,2024	0/0:20,0:20:60.20:0,60,899	0/0:24,0:24:66.22:0,66,988	0/0:53,0:53:99:0,157,2296	0/0:21,0:21:63.21:0,63,943	1/1:2,36:38:99:1402,108,0	0/0:20,0:20:60.20:0,60,897	1/1:0,12:12:36.12:467,36,0
chr10	98647436	.	T	TCTGCCTGAC	7790.69	PASS	AB=0.800;AC=7;AF=0.125;AN=56;BaseQRankSum=7.511;DP=750;FS=3.563;HRun=0;HaplotypeScore=210.0130;InbreedingCoeff=0.8306;MQ=87.55;MQ0=0;MQRankSum=-11.633;QD=102.51;ReadPosRankSum=-3.849;VQSLOD=3.9310;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:66:99:0,184,5285	0/0:8,0:8:24.08:0,24,665	0/0:31,0:31:81.28:0,81,2105	0/0:24,0:24:60.20:0,60,1599	0/0:24,0:24:69.24:0,69,1951	0/0:30,0:30:81.28:0,81,2413	0/0:27,0:27:78.27:0,78,2216	1/1:21,5:28:77.46:3090,77,0	0/0:28,0:28:78.24:0,78,2049	0/0:26,0:26:75.25:0,75,2202	0/0:13,0:13:33.11:0,33,992	0/0:19,0:19:54.19:0,54,1599	0/0:21,0:21:63.20:0,63,1791	0/0:24,0:24:63.22:0,63,1853	0/0:22,0:22:63.22:0,63,1873	1/1:5,13:18:54.16:2229,54,0	0/0:37,0:37:99:0,108,3188	0/0:40,0:40:99:0,111,3161	0/0:21,0:21:57.13:0,57,1449	0/0:22,0:22:60.21:0,60,1770	0/0:54,0:54:99:0,150,4191	0/0:21,0:21:63:0,63,1713	0/0:17,0:17:48.16:0,48,1368	0/0:52,0:52:99:0,147,4200	0/0:23,0:23:66.21:0,66,1817	0/1:18,6:24:33.75:1937,0,34	0/0:24,0:24:69.24:0,69,1996	1/1:4,2:6:15.05:535,15,0
chr10	98647620	.	T	TA	3032.15	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=-6.275;DP=542;FS=5.030;HRun=1;HaplotypeScore=54.8452;InbreedingCoeff=0.9731;MQ=61.16;MQ0=0;MQRankSum=-2.694;QD=36.10;ReadPosRankSum=-1.684;VQSLOD=3.0250;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1496	0/0:10,0:10:27.05:0,27,330	0/0:9,0:9:21.05:0,21,244	./.	0/0:22,0:22:66.13:0,66,823	0/0:30,0:30:90.22:0,90,1133	0/0:18,0:18:45.11:0,45,540	1/1:0,34:33:99:1391,99,0	0/0:21,0:21:63.19:0,63,791	0/0:26,0:26:78.19:0,78,948	0/0:13,0:13:36.11:0,36,449	0/0:17,0:17:48.14:0,48,608	0/0:13,0:13:36.12:0,36,466	0/0:14,0:14:42.13:0,42,531	0/0:17,0:17:51.17:0,51,660	1/1:1,19:20:51.17:760,51,0	0/0:39,0:39:99:0,114,1428	0/0:21,0:21:60.17:0,60,762	0/0:25,0:25:75.22:0,75,943	0/0:22,0:22:66.17:0,66,802	0/0:20,0:20:60.08:0,60,677	0/0:9,0:9:24.06:0,24,295	0/0:18,0:18:48.06:0,48,582	0/0:13,0:13:39.13:0,39,505	0/0:20,0:20:57.11:0,57,697	1/1:3,15:18:7.05:586,7,0	0/0:21,0:21:63.18:0,63,788	1/1:0,12:12:30.10:448,30,0
chr10	98647879	.	A	AG	2919.24	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-5.199;DP=517;FS=24.036;HRun=3;HaplotypeScore=70.5524;InbreedingCoeff=0.9948;MQ=77.11;MQ0=0;MQRankSum=-3.769;QD=35.60;ReadPosRankSum=-0.935;VQSLOD=1.4757;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1185	0/0:11,0:11:27.04:0,27,308	0/0:13,0:13:36.09:0,36,416	0/0:26,0:26:36.84:0,37,671	0/0:20,0:20:48.13:0,48,564	0/0:10,0:10:15.04:0,15,180	0/0:17,0:17:48.12:0,48,575	1/1:1,22:23:63.21:858,63,0	0/0:14,0:14:32.81:0,33,395	0/0:20,0:20:51.16:0,51,610	0/0:12,0:12:35.85:0,36,407	0/0:17,0:17:36.07:0,36,415	0/0:16,0:16:45.14:0,45,539	0/0:14,0:14:39.12:0,39,468	0/0:15,0:15:42.13:0,42,503	1/1:0,21:21:57.10:753,57,0	0/0:41,0:41:99:0,120,1424	0/0:12,0:12:33.10:0,33,396	0/0:17,0:17:33.06:0,33,379	0/0:15,0:16:38.71:0,39,441	0/0:27,0:27:78.24:0,78,936	0/0:14,0:14:42.13:0,42,503	0/0:16,0:16:42.09:0,42,485	0/0:19,0:19:54.16:0,54,645	0/0:15,0:15:39.08:0,39,451	1/1:2,23:25:36.23:923,36,0	0/0:18,0:18:48.15:0,48,576	1/1:0,13:13:39.13:545,39,0
chr10	98653305	.	GC	G	1611.73	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.059;DP=689;FS=0.000;HRun=1;HaplotypeScore=63.1814;InbreedingCoeff=0.9783;MQ=83.49;MQ0=0;MQRankSum=-0.504;QD=35.04;ReadPosRankSum=-1.871;VQSLOD=2.9041;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:99:0,114,1805	0/0:11,0:11:33.10:0,33,504	0/0:22,0:21:60.19:0,60,915	0/0:19,0:19:54.18:0,54,828	0/0:21,0:21:63.19:0,63,979	0/0:19,0:19:57.19:0,57,911	0/0:23,0:23:69.22:0,69,1079	1/1:0,22:22:63.18:847,63,0	0/0:31,0:31:93.30:0,93,1463	0/0:39,0:39:99:0,117,1848	0/0:17,0:17:51.17:0,51,811	0/0:30,0:30:90.31:0,90,1438	0/0:36,0:36:99:0,108,1672	0/0:23,0:23:66.22:0,66,1055	0/0:29,0:29:87.30:0,87,1387	0/0:27,0:27:81.24:0,81,1225	0/0:20,0:20:57.19:0,57,911	0/0:29,0:29:87.28:0,87,1365	0/0:23,0:23:65.55:0,66,942	0/0:33,0:33:99:0,99,1509	0/0:29,0:29:87.30:0,87,1389	0/0:15,0:15:45.13:0,45,674	0/0:18,0:18:54.18:0,54,859	0/0:35,0:35:99:0,102,1628	0/0:26,0:25:78.25:0,78,1221	1/1:1,19:20:12.35:732,12,0	0/0:30,0:30:87.30:0,87,1378	1/1:0,4:4:12.04:168,12,0
chr10	98654091	.	CTAGTGGT	C	300.19	PASS	AB=0.733;AC=5;AF=0.089;AN=56;BaseQRankSum=5.151;DP=607;FS=0.000;HRun=0;HaplotypeScore=155.4814;InbreedingCoeff=0.6653;MQ=86.01;MQ0=1;MQRankSum=-4.918;QD=15.01;ReadPosRankSum=4.623;VQSLOD=2.7538;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,4799	0/0:11,0:11:30.10:0,30,1235	0/0:20,0:20:60.21:0,60,2312	0/0:22,0:22:66.01:0,66,2415	0/0:19,0:19:51.17:0,51,1717	0/0:23,0:23:69.24:0,69,2753	0/0:24,0:24:72.25:0,72,3021	0/0:21,0:21:54.45:0,54,389	0/0:19,0:19:57.20:0,57,2323	0/0:24,0:24:69.23:0,69,2642	0/0:20,0:20:57.18:0,57,2027	0/0:28,0:28:84.29:0,84,3421	0/0:23,0:23:69.24:0,69,2817	0/0:20,0:20:57.20:0,57,2336	0/0:22,0:22:66.23:0,66,2769	1/1:2,2:4:6.02:98,6,0	0/0:42,0:42:99:0,126,5198	0/0:22,0:22:66.20:0,66,2462	0/0:25,0:25:75.26:0,75,2927	0/0:17,0:17:48.16:0,48,1857	0/0:30,0:29:87.30:0,87,3435	0/0:21,0:21:60.21:0,60,2164	0/0:22,0:22:63.19:0,63,2128	0/0:24,0:24:72.25:0,72,3020	0/0:18,0:18:54.04:0,54,1892	0/1:7,4:11:94.33:169,0,94	0/0:30,0:30:87.30:0,87,3555	1/1:2,3:5:5.76:144,6,0
chr10	98654099	.	CCTAAACGCTTCCCTCTTG	C	1034.77	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=5.149;DP=569;FS=0.000;HRun=0;HaplotypeScore=285.1876;InbreedingCoeff=0.9266;MQ=90.08;MQ0=1;MQRankSum=-5.114;QD=114.97;ReadPosRankSum=4.532;VQSLOD=3.0038;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,9252	0/0:12,0:12:36.12:0,36,2861	0/0:22,0:22:66.23:0,66,4083	0/0:23,0:23:65.99:0,66,4758	0/0:14,0:14:42.14:0,42,3340	0/0:24,0:24:72.25:0,72,5989	0/0:27,0:27:81.28:0,81,6548	./.	0/0:20,0:20:60.19:0,60,4716	0/0:22,0:22:66.23:0,66,5146	0/0:17,0:17:51.18:0,51,3961	0/0:26,0:26:78.27:0,78,6540	0/0:24,0:24:72.25:0,72,5826	0/0:20,0:20:60.21:0,60,4842	0/0:26,0:26:78.27:0,78,6492	1/1:0,2:2:6.02:256,6,0	0/0:41,0:41:99:0,123,9902	0/0:18,0:18:54.19:0,54,4479	0/0:26,0:26:78.26:0,78,5006	0/0:16,0:16:48.16:0,48,3690	0/0:29,0:28:84.29:0,84,7171	0/0:19,0:19:54.19:0,54,4416	0/0:21,0:21:60.21:0,60,5170	0/0:26,0:26:78.27:0,78,5976	0/0:19,0:19:57.20:0,57,4840	1/1:0,4:4:12.04:516,12,0	0/0:29,0:29:84.29:0,84,6561	1/1:0,3:3:9.03:386,9,0
chr10	98654120	.	CGGTAGAGAAAGGATACTT	C	1205.95	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=5.149;DP=563;FS=0.000;HRun=0;HaplotypeScore=280.2228;InbreedingCoeff=0.9262;MQ=90.81;MQ0=0;MQRankSum=-5.076;QD=133.99;ReadPosRankSum=4.122;VQSLOD=2.9119;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.33:0,96,8035	0/0:9,0:9:27.09:0,27,2251	0/0:24,0:24:72.25:0,72,4992	0/0:22,0:22:66.23:0,66,4268	0/0:12,0:12:36.12:0,36,2288	0/0:22,0:22:66.23:0,66,5203	0/0:31,0:31:93.32:0,93,7595	./.	0/0:21,0:21:63.22:0,63,5194	0/0:20,0:20:60.21:0,60,5006	0/0:21,0:21:63.17:0,63,4738	0/0:26,0:26:78.25:0,78,6452	0/0:24,0:24:72.25:0,72,6186	0/0:23,0:23:69.24:0,69,5937	0/0:32,0:32:96.33:0,96,8255	1/1:0,2:2:6.02:294,6,0	0/0:35,0:35:99:0,105,7908	0/0:19,0:19:57.15:0,57,4458	0/0:21,0:21:63.22:0,63,4708	0/0:16,0:16:48.16:0,48,3488	0/0:33,0:32:96.33:0,96,7855	0/0:25,0:25:75.26:0,75,6297	0/0:21,0:21:63.22:0,63,5578	0/0:23,0:23:69.24:0,69,5772	0/0:19,0:19:57.18:0,57,4415	1/1:0,4:4:12.04:591,12,0	0/0:23,0:23:69.24:0,69,5413	1/1:0,3:3:9.03:444,9,0
chr10	98664698	.	C	CTT	4535.36	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-14.066;DP=729;FS=0.872;HRun=3;HaplotypeScore=82.2256;InbreedingCoeff=0.9999;MQ=78.86;MQ0=1;MQRankSum=1.053;QD=47.24;ReadPosRankSum=-1.586;VQSLOD=3.7900;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1418	0/0:14,0:14:39.13:0,39,545	0/0:15,0:15:33.09:0,33,433	0/0:26,0:26:53.88:0,54,692	0/0:40,0:40:99:0,114,1586	0/0:29,0:29:81.26:0,81,1116	0/0:25,0:25:72.24:0,72,1006	1/1:0,29:28:84.29:1520,84,0	0/0:28,0:28:81.27:0,81,1132	0/0:36,0:36:99:0,105,1432	0/0:24,0:24:69.23:0,69,964	0/0:18,0:18:51.17:0,51,714	0/0:28,0:28:84.28:0,84,1173	0/0:26,0:26:72.22:0,72,984	0/0:29,0:29:81.27:0,81,1133	1/1:0,15:16:39.06:646,39,0	0/0:23,0:23:66.14:0,66,864	0/0:24,0:24:69.23:0,69,964	0/0:23,0:23:66.22:0,66,924	0/0:34,0:34:90.30:0,90,1258	0/0:25,0:25:72.24:0,72,1008	0/0:23,0:23:60.20:0,60,839	0/0:33,0:33:93.31:0,93,1301	0/0:14,0:14:39.13:0,39,546	0/0:25,0:25:69.23:0,69,960	1/1:1,32:32:51.28:1545,51,0	0/0:34,0:34:96.30:0,96,1325	1/1:1,17:17:45.15:825,45,0
chr10	98715207	.	CT	C	2909.77	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.730;DP=793;FS=2.001;HRun=1;HaplotypeScore=80.6923;InbreedingCoeff=0.9999;MQ=90.25;MQ0=0;MQRankSum=-0.332;QD=35.48;ReadPosRankSum=-3.056;VQSLOD=2.7299;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,162,2581	0/0:15,0:15:42.14:0,42,645	0/0:24,0:24:69.15:0,69,996	0/0:40,0:41:99:0,100,1570	0/0:28,0:28:81.22:0,81,1250	0/0:17,0:17:51.14:0,51,788	0/0:30,0:30:90.28:0,90,1387	1/1:0,34:34:99:1333,99,0	0/0:34,0:34:99:0,102,1625	0/0:42,0:42:99:0,126,1965	0/0:22,0:22:54.18:0,54,860	0/0:31,0:31:93.30:0,93,1463	0/0:30,0:30:90.31:0,90,1428	0/0:18,0:18:48.16:0,48,767	0/0:22,0:22:66.21:0,66,1022	0/0:33,0:33:99:0,99,1560	0/0:31,0:31:90.28:0,90,1389	0/0:24,0:24:72.23:0,72,1120	0/0:13,0:13:39.13:0,39,606	0/0:28,0:28:78.27:0,78,1236	0/0:44,0:44:99:0,132,2082	0/0:23,0:23:66.23:0,66,1051	0/0:32,0:32:87.30:0,87,1387	0/0:35,0:35:99:0,102,1597	0/0:18,0:18:51.17:0,51,790	1/1:1,32:33:48.31:1217,48,0	0/0:19,0:19:57.16:0,57,855	1/1:0,15:15:36.12:502,36,0
chr10	98715749	.	GA	G	13660.55	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.843;DP=668;FS=0.538;HRun=9;HaplotypeScore=85.0014;InbreedingCoeff=0.9515;MQ=78.69;MQ0=0;MQRankSum=-4.610;QD=23.19;ReadPosRankSum=4.154;VQSLOD=5.3458;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:87.04:796,87,0	1/1:0,8:8:21.01:192,21,0	0/0:32,0:28:39.54:0,40,428	0/0:18,0:17:4.99:0,5,215	1/1:1,20:21:57.02:521,57,0	1/1:2,22:24:54.03:494,54,0	1/1:3,15:18:42.02:384,42,0	1/1:0,32:32:92.82:806,93,0	1/1:1,18:19:48.03:439,48,0	1/1:2,32:34:93.02:841,93,0	1/1:0,21:21:60.03:549,60,0	1/1:1,25:26:66.04:604,66,0	1/1:2,22:24:63.03:576,63,0	1/1:1,23:24:51.03:467,51,0	1/1:2,24:26:63.03:577,63,0	0/0:28,0:28:81.23:0,81,926	1/1:3,33:36:84.04:769,84,0	1/1:1,22:23:60.02:549,60,0	1/1:2,13:15:39.01:354,39,0	1/1:1,22:23:65.99:594,66,0	1/1:0,25:25:63.03:576,63,0	1/1:1,17:18:39.02:357,39,0	1/1:2,23:25:62.94:576,63,0	1/1:1,11:12:27.01:247,27,0	1/1:0,22:22:60.03:549,60,0	1/1:1,28:29:81.02:733,81,0	1/1:2,23:27:58.10:506,58,0	1/1:0,24:24:66.04:604,66,0
chr10	98716038	.	ACAT	A	2765.03	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.068;DP=707;FS=5.136;HRun=0;HaplotypeScore=97.3933;InbreedingCoeff=0.9925;MQ=76.49;MQ0=0;MQRankSum=-0.883;QD=29.73;ReadPosRankSum=0.198;VQSLOD=3.6522;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:66.23:0,66,1356	0/0:7,0:7:21.07:0,21,432	0/0:21,0:21:21.07:0,21,382	0/0:20,0:19:18.06:0,18,348	0/0:16,0:16:42.14:0,42,842	0/0:31,0:31:84.27:0,84,1689	0/0:21,0:21:60.21:0,60,1232	1/1:14,21:35:63.19:879,63,0	0/0:25,0:25:69.24:0,69,1391	0/0:17,0:17:39.13:0,39,801	0/0:15,0:15:42.14:0,42,863	0/0:27,0:27:66.21:0,66,1304	0/0:27,0:27:75.26:0,75,1525	0/0:24,0:24:66.21:0,66,1304	0/0:41,0:41:99:0,117,2365	0/0:38,0:38:99:0,102,2097	0/0:33,0:33:84.29:0,84,1726	0/0:8,0:8:21.07:0,21,431	0/0:18,0:18:42.14:0,42,853	0/0:20,0:20:57.18:0,57,1134	0/0:22,0:22:51.17:0,51,1016	0/0:23,0:23:63.21:0,63,1229	0/0:16,0:16:48.16:0,48,987	0/0:41,0:41:99:0,99,1997	0/0:34,0:34:87.30:0,87,1788	1/1:4,29:33:28.60:1199,29,0	0/0:40,1:41:46.65:0,47,1712	1/1:4,21:25:57.19:829,57,0
chr10	98716851	.	ACC	A	12851.30	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=11.492;DP=524;FS=25.623;HRun=5;HaplotypeScore=67.4099;InbreedingCoeff=0.9484;MQ=77.44;MQ0=4;MQRankSum=-1.667;QD=35.50;ReadPosRankSum=2.579;VQSLOD=3.3306;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,105,1892	1/1:0,5:5:15.05:210,15,0	0/0:16,0:16:40.17:0,40,724	0/0:9,0:9:24.05:0,24,406	1/1:0,6:6:15.01:210,15,0	1/1:1,10:11:30.10:420,30,0	1/1:2,25:27:69.23:966,69,0	0/0:18,0:18:39.13:0,39,692	1/1:0,18:18:51.17:714,51,0	1/1:0,10:10:27.09:378,27,0	1/1:0,6:6:8.92:126,9,0	1/1:1,25:25:63.19:881,63,0	1/1:0,23:23:54.18:752,54,0	1/1:0,24:24:66.22:923,66,0	1/1:0,12:11:27.09:378,27,0	0/0:26,0:26:66.20:0,66,1146	1/1:4,51:54:99:1973,141,0	0/0:33,0:33:96.33:0,96,1751	1/1:1,10:11:30.10:419,30,0	1/1:0,4:4:12.04:168,12,0	1/1:4,43:46:99:1510,108,0	1/1:0,7:7:21.03:268,21,0	1/1:0,2:2:3.01:42,3,0	1/1:1,44:45:99:1633,117,0	1/1:0,10:10:27.09:378,27,0	0/0:13,0:13:39.13:0,39,713	1/1:0,13:13:36.12:504,36,0	0/0:6,0:6:18.05:0,18,279
chr10	98717108	.	T	TAAAGGTCCCAGGCAGGACTAGAG	8842.24	PASS	AB=0.857;AC=47;AF=0.979;AN=48;BaseQRankSum=-0.577;DP=71;FS=8.373;HRun=0;HaplotypeScore=67.0082;InbreedingCoeff=-0.1388;MQ=95.25;MQ0=0;MQRankSum=-1.428;QD=126.32;ReadPosRankSum=0.881;VQSLOD=3.6293;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:1:3.01:121,3,0	1/1:1,0:1:3.01:322,3,0	1/1:3,0:4:9.03:287,9,0	0/1:5,1:6:25.87:572,0,26	1/1:3,0:3:3.01:40,3,0	1/1:2,0:2:3.01:120,3,0	1/1:4,0:4:8.88:334,9,0	1/1:2,0:2:6.02:333,6,0	1/1:1,0:1:3.01:299,3,0	1/1:2,0:2:3.01:230,3,0	1/1:2,0:2:6.02:267,6,0	1/1:1,0:1:3.01:209,3,0	1/1:1,0:1:3.01:40,3,0	./.	./.	1/1:2,0:3:6.02:515,6,0	1/1:1,0:1:3.01:300,3,0	1/1:4,0:4:9:164,9,0	1/1:2,0:2:6.02:399,6,0	./.	1/1:6,0:8:18.06:774,18,0	1/1:3,0:3:9.03:253,9,0	1/1:4,0:4:12:447,12,0	1/1:4,0:4:5.98:318,6,0	1/1:3,0:4:9.50:764,10,0	1/1:5,0:5:15.05:1134,15,0	./.	1/1:2,0:2:6.02:600,6,0
chr10	98718380	.	CT	C	82.87	PASS	AB=0.944;AC=15;AF=0.268;AN=56;BaseQRankSum=0.352;DP=516;FS=5.564;HRun=18;HaplotypeScore=110.9474;InbreedingCoeff=0.2879;MQ=56.17;MQ0=6;MQRankSum=0.303;QD=0.42;ReadPosRankSum=2.520;VQSLOD=-0.5231;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,1:23:10.22:0,10,122	0/1:13,0:13:9.56:10,0,44	0/0:21,0:8:6.01:0,6,34	0/1:12,0:9:5.21:5,0,15	0/0:24,0:24:31.03:0,31,190	0/0:22,1:23:16.56:0,17,145	0/0:10,0:11:5.14:0,5,64	1/1:21,0:25:8.85:29,9,0	1/1:12,3:14:13.11:60,13,0	0/0:23,0:23:27.29:0,27,186	0/1:14,1:15:19.98:20,0,51	0/0:19,1:20:21.27:0,21,141	0/0:14,0:14:15.27:0,15,106	0/0:22,1:21:19.84:0,20,103	0/1:23,1:25:49.27:49,0,72	0/1:12,1:13:6.80:7,0,70	0/1:22,3:26:11.50:11,0,184	0/0:14,0:15:20.24:0,20,115	0/0:16,0:15:7.28:0,7,59	0/0:15,0:15:26.67:0,27,182	0/0:14,1:14:11.12:0,11,147	0/1:19,2:21:0.66:1,0,117	0/0:12,0:12:14.71:0,15,99	0/0:22,0:22:5.12:0,5,161	0/0:16,0:16:17.16:0,17,90	1/1:18,0:25:9.21:34,9,0	0/0:22,2:24:6.19:0,6,166	1/1:1,0:5:5.34:16,5,0
chr10	98719959	.	TCAC	T	4428.95	PASS	AB=0.846;AC=28;AF=0.500;AN=56;BaseQRankSum=5.329;DP=472;FS=38.776;HRun=0;HaplotypeScore=103.8837;InbreedingCoeff=-0.3442;MQ=76.36;MQ0=1;MQRankSum=-2.900;QD=11.41;ReadPosRankSum=10.817;VQSLOD=2.2247;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:77.78:0,78,985	0/1:8,3:11:28.20:132,0,28	0/0:18,0:17:40.07:0,40,414	0/0:13,0:11:20.63:0,21,242	0/1:17,3:20:49.21:238,0,49	0/1:17,5:22:67.20:245,0,67	1/1:19,3:22:0.96:255,1,0	0/1:19,0:19:27.72:28,0,240	1/1:7,7:14:37.84:282,38,0	0/1:13,3:16:84.76:153,0,85	0/1:12,2:14:10.58:186,0,11	0/1:11,8:19:31.39:392,0,31	0/1:13,7:20:46.28:294,0,46	0/1:14,9:23:19.95:332,0,20	1/1:18,5:24:19.42:407,19,0	0/0:11,0:11:23.88:0,24,248	0/1:18,5:23:31.93:267,0,32	0/0:11,0:11:30.03:0,30,374	0/1:16,1:17:23.61:24,0,204	0/1:7,1:8:57.59:58,0,69	0/1:20,2:23:99:117,0,125	0/1:8,1:9:41.99:42,0,109	0/1:10,2:12:47.66:95,0,48	0/1:16,2:18:33.43:139,0,33	1/1:8,3:11:5.01:205,5,0	1/1:18,4:23:4.39:320,4,0	0/1:11,2:14:11.12:166,0,11	0/1:5,1:6:31.13:53,0,31
chr10	98719961	.	ACCC	A	8667.02	PASS	AB=0.750;AC=45;AF=0.804;AN=56;BaseQRankSum=-3.297;DP=470;FS=15.206;HRun=13;HaplotypeScore=91.3636;InbreedingCoeff=0.8664;MQ=77.91;MQ0=1;MQRankSum=-3.182;QD=22.51;ReadPosRankSum=1.909;VQSLOD=2.2171;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:47.83:0,48,748	1/1:4,2:10:20.63:206,21,0	0/0:21,0:18:21.80:0,22,236	0/0:16,0:12:6.81:0,7,162	1/1:7,12:20:41.96:484,42,0	1/1:11,8:21:44.96:508,45,0	1/1:6,16:22:54.07:636,54,0	1/1:12,7:19:20.80:224,21,0	1/1:7,7:14:39.12:473,39,0	1/1:8,7:16:33:366,33,0	1/1:5,9:16:35.95:400,36,0	1/1:14,5:19:42.07:496,42,0	1/1:12,7:19:36.02:435,36,0	1/1:14,9:23:51.10:604,51,0	1/1:9,15:24:63.08:738,63,0	0/0:7,0:10:15.02:0,15,208	1/1:9,12:21:36.08:435,36,0	0/0:8,0:10:23.63:0,24,312	0/1:12,6:18:2.07:190,0,2	1/1:4,4:8:11.96:125,12,0	1/1:11,12:23:21.45:254,21,0	1/1:6,3:9:8.96:104,9,0	1/1:5,7:12:18.03:218,18,0	1/1:5,11:17:29.99:341,30,0	1/1:5,6:11:27.07:312,27,0	1/1:7,13:23:59.97:666,60,0	1/1:5,7:14:32.87:345,33,0	1/1:3,3:6:9.02:109,9,0
chr10	98720060	.	T	TG	762.75	PASS	AB=0.837;AC=10;AF=0.179;AN=56;BaseQRankSum=1.319;DP=431;FS=3.796;HRun=11;HaplotypeScore=84.3642;InbreedingCoeff=-0.1636;MQ=77.74;MQ0=0;MQRankSum=-0.418;QD=5.12;ReadPosRankSum=-1.942;VQSLOD=1.6106;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:24.79:0,25,172	0/0:6,0:7:10.97:0,11,75	0/1:25,0:21:10.89:11,0,95	0/0:20,0:17:2.34:0,2,78	0/0:11,0:11:12.77:0,13,96	0/1:7,2:9:5.21:79,0,5	0/0:22,0:25:26.01:0,26,293	0/0:24,0:25:7.11:0,7,69	0/1:14,4:17:19.51:160,0,20	0/0:17,0:18:19.95:0,20,143	0/0:10,0:10:11.92:0,12,89	0/1:11,1:12:25.69:122,0,26	0/1:12,1:13:41.32:149,0,41	0/1:13,0:13:60.29:133,0,60	0/0:25,0:26:34.23:0,34,404	0/0:11,0:11:23.26:0,23,168	0/0:18,0:19:40.72:0,41,294	0/1:9,11:20:37.30:37,0,62	0/0:8,0:9:7.93:0,8,53	0/0:14,0:14:14.38:0,14,96	0/0:14,0:15:20.80:0,21,157	0/1:12,0:12:9.02:59,0,9	0/1:4,6:10:12.85:22,0,13	0/1:6,11:17:25.18:131,0,25	0/0:10,0:11:13.91:0,14,95	0/0:10,0:10:14.79:0,15,105	0/0:14,0:17:31.76:0,32,203	0/0:10,0:12:15.95:0,16,103
chr10	98720718	.	CT	C	884.24	PASS	AB=0.933;AC=5;AF=0.089;AN=56;BaseQRankSum=4.485;DP=494;FS=1.461;HRun=7;HaplotypeScore=58.6322;InbreedingCoeff=0.8485;MQ=61.79;MQ0=0;MQRankSum=-0.141;QD=16.68;ReadPosRankSum=-0.109;VQSLOD=3.3823;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:63.13:638,63,0	0/0:9,0:9:24.08:0,24,302	0/1:12,1:14:1.03:1,0,243	0/0:12,0:12:26.98:0,27,295	0/0:17,0:17:51.12:0,51,617	0/0:15,0:15:36.12:0,36,452	0/0:29,0:29:78.24:0,78,960	0/0:31,0:31:84.27:0,84,1056	0/0:19,0:19:57.11:0,57,682	0/0:20,0:20:54.16:0,54,666	0/0:14,1:15:11.97:0,12,455	0/0:21,0:21:57.17:0,57,701	0/0:14,0:15:43.93:0,44,519	0/0:17,0:17:51.06:0,51,589	0/0:22,0:22:63.16:0,63,774	0/0:12,0:12:32.55:0,33,376	0/0:30,0:30:78.23:0,78,960	1/1:2,13:15:36.07:367,36,0	0/0:24,0:24:66.18:0,66,813	0/0:17,0:17:51.15:0,51,623	0/0:15,0:15:42.05:0,42,481	0/0:8,0:8:24.07:0,24,292	0/0:13,0:13:39.08:0,39,469	0/0:22,0:22:54.08:0,54,631	0/0:13,0:13:39.07:0,39,462	0/0:16,0:16:45.08:0,45,566	0/0:23,0:23:66.18:0,66,797	0/0:6,0:6:18.06:0,18,221
chr10	98721592	.	G	GA	7894.35	PASS	AB=0.962;AC=42;AF=0.750;AN=56;BaseQRankSum=0.908;DP=508;FS=10.560;HRun=10;HaplotypeScore=89.0086;InbreedingCoeff=0.7970;MQ=75.64;MQ0=0;MQRankSum=-1.962;QD=20.77;ReadPosRankSum=0.197;VQSLOD=4.9072;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:36:57.03:0,57,165	1/1:1,4:5:12.03:128,12,0	0/1:8,0:8:8.90:9,0,59	0/0:10,0:11:11.69:0,12,84	1/1:3,22:25:60.10:621,60,0	1/1:0,26:26:69.17:736,69,0	1/1:2,8:10:24.06:256,24,0	0/0:23,0:24:64.96:0,65,523	1/1:2,12:14:24.06:256,24,0	1/1:3,18:21:47.58:454,48,0	1/1:1,13:14:33:327,33,0	1/1:3,14:17:27.07:288,27,0	1/1:2,13:15:33.04:352,33,0	1/1:3,12:15:21.01:211,21,0	1/1:3,16:19:33.08:352,33,0	0/0:17,0:17:44.94:0,45,369	1/1:3,31:34:81.20:864,81,0	0/0:3,0:24:38.70:0,39,112	1/1:4,12:16:14.42:346,14,0	1/1:6,22:28:40.60:585,41,0	1/1:0,9:11:20.75:188,21,0	1/1:8,9:17:32.99:331,33,0	1/1:2,16:18:33.08:352,33,0	1/1:2,13:15:33.04:340,33,0	1/1:4,9:13:8.23:276,8,0	0/0:16,0:16:35.93:0,36,293	1/1:3,24:26:57.14:608,57,0	0/1:11,1:12:14.07:14,0,105
chr10	98722028	.	ATT	A	734.87	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.126;DP=717;FS=2.159;HRun=3;HaplotypeScore=98.5242;InbreedingCoeff=0.9227;MQ=89.69;MQ0=0;MQRankSum=-9.340;QD=14.13;ReadPosRankSum=0.158;VQSLOD=0.5432;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,30:43:64.84:747,65,0	0/0:11,0:11:33.11:0,33,629	0/0:27,0:27:81.17:0,81,1505	0/0:30,0:30:87.29:0,87,1612	0/0:25,0:25:72.23:0,72,1327	0/0:26,0:26:75.24:0,75,1415	0/0:25,0:25:72.23:0,72,1349	0/0:30,0:30:87.29:0,87,1617	0/0:18,0:18:54.15:0,54,1006	0/0:31,0:31:84.28:0,84,1590	0/0:19,0:19:57.14:0,57,1029	0/0:30,0:30:87.29:0,87,1643	0/0:24,0:24:72.25:0,72,1358	0/0:29,0:29:84.27:0,84,1551	0/0:33,0:33:99:0,99,1875	0/0:22,0:22:66.23:0,66,1275	0/0:24,0:24:72.25:0,72,1383	1/1:4,5:9:4.35:98,4,0	0/0:29,0:29:84.23:0,84,1551	0/0:33,0:33:96.24:0,96,1770	0/0:33,0:33:99:0,99,1841	0/0:20,0:20:59.52:0,60,1071	0/0:19,0:19:57.19:0,57,1069	0/0:29,0:29:87.30:0,87,1671	0/0:15,0:15:39.13:0,39,723	0/0:32,0:32:90.31:0,90,1739	0/0:33,0:33:96.32:0,96,1806	0/0:18,0:18:54.13:0,54,912
chr10	98722032	.	GT	G	143.92	PASS	AB=0.590;AC=2;AF=0.036;AN=56;BaseQRankSum=9.308;DP=714;FS=5.679;HRun=3;HaplotypeScore=84.8777;InbreedingCoeff=-0.0368;MQ=88.82;MQ0=0;MQRankSum=-8.210;QD=3.06;ReadPosRankSum=1.202;VQSLOD=0.1156;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:9,30:39:49.94:211,0,50	0/0:13,0:13:36.12:0,36,572	0/0:25,0:25:75.25:0,75,1150	0/0:30,0:30:78.24:0,78,1268	0/0:25,0:25:72.22:0,72,1100	0/0:26,0:26:75.26:0,75,1196	0/0:25,0:25:75.24:0,75,1167	0/0:31,0:31:93.32:0,93,1485	0/0:19,0:19:54.17:0,54,839	0/0:28,0:28:81.27:0,81,1276	0/0:18,0:18:54.18:0,54,836	0/0:29,0:29:87.30:0,87,1387	0/0:25,0:25:75.24:0,75,1175	0/0:28,0:28:84.27:0,84,1314	0/0:33,0:33:99:0,99,1532	0/0:23,0:23:69.19:0,69,1049	0/0:26,0:26:78.25:0,78,1217	0/1:3,5:8:21.32:21,0,40	0/0:32,0:32:96.33:0,96,1517	0/0:33,0:33:96.29:0,96,1452	0/0:34,0:34:99:0,102,1571	0/0:19,0:19:57.18:0,57,872	0/0:20,0:20:57.19:0,57,893	0/0:30,0:30:90.31:0,90,1429	0/0:15,0:15:36.12:0,36,575	0/0:33,0:33:99:0,99,1553	0/0:33,0:33:99:0,99,1574	0/0:14,0:14:42.14:0,42,671
chr10	98722034	.	CCTT	C	935.69	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.296;DP=717;FS=7.487;HRun=0;HaplotypeScore=111.0881;InbreedingCoeff=0.9921;MQ=87.70;MQ0=0;MQRankSum=-9.710;QD=20.34;ReadPosRankSum=0.350;VQSLOD=2.6754;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,30:38:83.82:900,84,0	0/0:13,0:13:39.09:0,39,904	0/0:24,0:24:72.20:0,72,1676	0/0:29,0:29:84.29:0,84,1980	0/0:25,0:25:72.19:0,72,1607	0/0:26,0:26:75.24:0,75,1800	0/0:26,0:26:78.25:0,78,1800	0/0:32,0:32:96.33:0,96,2352	0/0:19,0:19:57.20:0,57,1377	0/0:28,0:28:81.28:0,81,1995	0/0:18,0:18:54.18:0,54,1280	0/0:32,0:32:96.33:0,96,2338	0/0:25,0:25:75.26:0,75,1847	0/0:28,0:28:84.29:0,84,2036	0/0:31,0:31:93.32:0,93,2293	0/0:21,0:21:63.22:0,63,1523	0/0:26,0:26:78.27:0,78,1888	1/1:3,5:8:15.25:154,15,0	0/0:34,0:34:99:0,102,2349	0/0:33,0:33:96.29:0,96,2297	0/0:34,0:34:99:0,102,2438	0/0:18,0:18:54.19:0,54,1320	0/0:21,0:21:63.17:0,63,1416	0/0:30,0:30:90.31:0,90,2205	0/0:15,0:15:39.09:0,39,907	0/0:34,0:34:99:0,102,2292	0/0:34,0:34:99:0,102,2435	0/0:15,0:15:45.15:0,45,1080
chr10	98722037	.	T	TGC	937.48	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.284;DP=718;FS=0.600;HRun=0;HaplotypeScore=97.1191;InbreedingCoeff=0.9989;MQ=89.99;MQ0=0;MQRankSum=-9.427;QD=18.75;ReadPosRankSum=-0.370;VQSLOD=3.2836;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:36,5:41:97.65:811,98,0	0/0:13,0:13:39.09:0,39,606	0/0:28,0:28:78.24:0,78,1190	0/0:30,0:30:87.24:0,87,1358	0/0:24,0:24:69.15:0,69,1065	0/0:27,0:27:78.26:0,78,1247	0/0:24,0:24:72.25:0,72,1171	0/0:34,0:34:99:0,99,1571	0/0:19,0:19:57.19:0,57,929	0/0:28,0:28:81.28:0,81,1318	0/0:18,0:18:51.17:0,51,808	0/0:33,0:33:96.33:0,96,1566	0/0:26,0:26:78.27:0,78,1269	0/0:27,0:27:81.28:0,81,1317	0/0:31,0:31:93.32:0,93,1516	0/0:20,0:20:60.20:0,60,979	0/0:25,0:25:75.26:0,75,1222	1/1:7,2:9:23.95:247,24,0	0/0:31,0:31:93.31:0,93,1493	0/0:32,0:32:96.28:0,96,1516	0/0:33,0:33:99:0,99,1615	0/0:18,0:18:54.18:0,54,867	0/0:20,0:20:60.15:0,60,924	0/0:31,0:31:93.29:0,93,1468	0/0:16,0:16:42.09:0,42,634	0/0:31,0:31:93.32:0,93,1509	0/0:34,0:34:99:0,102,1640	0/0:15,0:15:45.15:0,45,734
chr10	98722513	.	TTTTTTCTTTTC	T	2797.30	PASS	AB=0.952;AC=29;AF=0.518;AN=56;BaseQRankSum=4.317;DP=515;FS=27.666;HRun=0;HaplotypeScore=114.6388;InbreedingCoeff=0.3911;MQ=37.69;MQ0=167;MQRankSum=0.673;QD=10.68;ReadPosRankSum=0.171;VQSLOD=0.7230;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:22:65.87:0,66,1170	1/1:5,0:2:3.01:88,3,0	0/0:21,0:3:8.94:0,9,96	0/0:23,0:7:10.71:0,11,162	0/1:18,1:14:12.82:50,0,13	1/1:16,0:13:18.27:346,18,0	0/1:13,1:12:2.86:254,0,3	0/0:27,0:22:32.64:0,33,688	0/1:11,1:7:2.55:214,0,3	0/1:11,0:6:10.05:12,0,10	1/1:15,0:10:15.24:224,15,0	1/1:12,1:5:7.10:208,7,0	1/1:8,0:6:11.76:239,12,0	0/1:7,1:4:24.48:80,0,24	0/1:9,1:7:34.69:164,0,35	0/0:19,0:14:42.07:0,42,1030	0/1:28,1:6:1.76:23,0,2	0/0:46,0:35:68.32:0,68,1546	0/0:15,0:10:12.22:0,12,54	1/1:16,0:15:7.51:113,8,0	0/1:9,0:4:2.62:65,0,3	1/1:9,0:9:4.02:105,4,0	1/1:12,1:12:12.38:208,12,0	1/1:26,2:12:15.64:368,16,0	1/1:21,0:15:11.09:207,11,0	0/0:26,0:20:41.20:0,41,791	0/1:6,0:3:0.38:14,0,0	0/0:30,0:15:6.91:0,7,318
chr10	98722524	.	CT	C	2036.71	PASS	AB=0.765;AC=37;AF=0.661;AN=56;BaseQRankSum=5.790;DP=442;FS=5.029;HRun=7;HaplotypeScore=51.0358;InbreedingCoeff=0.5985;MQ=30.59;MQ0=155;MQRankSum=-3.996;QD=8.74;ReadPosRankSum=3.711;VQSLOD=0.3125;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:25:22.01:0,22,262	1/1:5,0:1:2.50:9,2,0	0/0:7,0:2:0:0,0,0	0/0:14,0:4:5.97:0,6,51	0/1:8,6:9:18.61:52,0,19	1/1:3,6:6:15.03:149,15,0	1/1:4,10:11:23.08:214,23,0	0/0:27,0:23:36:0,36,390	1/1:7,6:7:14.24:123,14,0	1/1:7,4:6:15.03:152,15,0	1/1:5,8:8:15.02:146,15,0	1/1:10,1:3:8.75:61,9,0	1/1:3,3:4:9.02:91,9,0	1/1:5,1:3:2.80:13,3,0	0/1:5,4:6:9.75:116,0,10	0/0:19,0:14:18.64:0,19,157	0/1:25,3:5:8.19:73,0,8	0/0:50,0:39:51.47:0,51,551	1/1:4,6:7:15.03:153,15,0	1/1:2,8:9:21.05:212,21,0	1/1:6,2:3:3.01:30,3,0	1/1:0,7:7:12.02:119,12,0	1/1:4,5:8:12.02:120,12,0	1/1:19,10:13:21.35:194,21,0	1/1:7,8:10:14.99:137,15,0	0/0:19,0:17:33.06:0,33,395	1/1:3,3:3:6.01:60,6,0	0/0:25,0:11:15.05:0,15,187
chr10	98723058	.	AC	A	2810.37	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.693;DP=718;FS=7.705;HRun=1;HaplotypeScore=70.9872;InbreedingCoeff=0.9967;MQ=77.08;MQ0=0;MQRankSum=-0.219;QD=39.58;ReadPosRankSum=-1.243;VQSLOD=3.5520;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.28:0,81,1295	0/0:9,0:9:24.08:0,24,384	0/0:15,0:15:18.73:0,19,597	0/0:16,0:16:45.12:0,45,674	0/0:26,0:26:78.27:0,78,1244	0/0:33,0:33:96.27:0,96,1496	0/0:23,0:23:69.23:0,69,1079	1/1:0,32:32:96.32:1341,96,0	0/0:22,0:22:66.23:0,66,1054	0/0:37,0:36:99:0,111,1775	0/0:16,0:16:48.16:0,48,767	0/0:41,0:41:99:0,123,1952	0/0:28,0:28:78.27:0,78,1245	0/0:26,0:26:78.27:0,78,1234	0/0:41,0:41:99:0,120,1903	0/0:32,0:32:96.30:0,96,1489	0/0:16,0:16:45.13:0,45,687	0/0:16,0:16:48.15:0,48,741	0/0:24,0:24:68.90:0,69,1065	0/0:26,0:26:75.26:0,75,1198	0/0:42,0:42:99:0,120,1894	0/0:26,0:26:78.25:0,78,1223	0/0:27,0:27:81.28:0,81,1292	0/0:21,0:21:57.19:0,57,908	0/0:23,0:23:69.24:0,69,1103	1/1:0,27:27:81.25:1109,81,0	0/0:34,0:33:96.33:0,96,1521	1/1:0,12:12:36.12:503,36,0
chr10	98723151	.	ATGTCAC	A	23632.44	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=15.066;DP=678;FS=3.015;HRun=0;HaplotypeScore=198.7355;InbreedingCoeff=0.9743;MQ=64.34;MQ0=0;MQRankSum=-16.490;QD=47.84;ReadPosRankSum=6.073;VQSLOD=4.8052;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.23:0,66,2288	1/1:0,13:13:33.11:753,33,0	0/0:16,0:16:8.56:0,9,626	0/0:12,0:11:11.90:0,12,429	1/1:7,32:39:75.26:1712,75,0	1/1:4,34:38:96.33:2192,96,0	1/1:5,10:15:18.06:411,18,0	0/0:45,0:45:99:0,108,3523	1/1:4,15:19:42.14:936,42,0	1/1:8,34:42:99:2256,99,0	1/1:3,26:29:51.17:1141,51,0	1/1:3,22:25:60.21:1347,60,0	1/1:5,22:27:66.23:1507,66,0	1/1:3,24:27:69.24:1575,69,0	1/1:5,23:28:54.01:1232,54,0	0/0:30,0:30:84.28:0,84,2844	1/1:4,13:17:35.48:762,35,0	0/0:13,0:13:30.99:0,31,990	1/1:6,17:23:45.15:1015,45,0	1/1:5,35:40:78.18:1661,78,0	1/1:2,6:8:15.05:342,15,0	1/1:1,24:25:66.23:1506,66,0	1/1:7,13:20:33.11:753,33,0	1/1:3,11:14:11.83:274,12,0	1/1:5,10:15:33.11:749,33,0	0/0:20,0:20:57.20:0,57,1938	1/1:4,25:30:66.23:1507,66,0	0/0:25,0:25:75.26:0,75,2606
chr10	98723930	.	CTGTGTG	C	2724.60	PASS	AB=0.599;AC=25;AF=0.481;AN=52;BaseQRankSum=-1.650;DP=568;FS=2.969;HRun=0;HaplotypeScore=125.3703;InbreedingCoeff=0.5475;MQ=56.04;MQ0=24;MQRankSum=2.624;QD=8.96;ReadPosRankSum=2.209;VQSLOD=2.3242;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:58.19:0,58,523	0/0:3,6:8:0.47:0,0,1	0/0:19,0:5:15.05:0,15,303	0/0:17,0:8:23.56:0,24,543	1/1:13,0:13:15.52:320,16,0	./.	1/1:7,0:17:2.55:63,3,0	0/0:22,0:20:53.56:0,54,413	1/1:9,0:10:18.06:384,18,0	1/1:8,19:27:37.97:910,38,0	1/1:4,19:23:2.90:50,3,0	0/1:4,0:12:0:0,0,0	1/1:12,0:13:25.73:336,26,0	1/1:7,10:16:6.01:78,6,0	0/1:9,14:23:13.02:47,0,13	0/0:32,0:32:87.77:0,88,2135	0/1:7,12:19:74.69:95,0,75	0/0:30,0:30:74.47:0,74,1022	1/1:7,9:16:7.08:456,7,0	1/1:4,20:23:9.50:141,10,0	0/0:14,16:28:2.37:0,2,9	0/1:5,15:19:0.05:0,0,0	0/1:3,13:16:0:0,0,0	0/1:19,19:38:0.01:0,0,0	0/1:3,7:10:0:0,0,0	0/0:22,0:21:28.56:0,29,381	0/0:8,12:19:0.47:0,0,1	./.
chr10	98724557	.	C	CA	11026.19	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-4.141;DP=609;FS=3.764;HRun=0;HaplotypeScore=92.5596;InbreedingCoeff=0.9820;MQ=69.39;MQ0=9;MQRankSum=-1.863;QD=25.12;ReadPosRankSum=7.948;VQSLOD=5.2944;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.09:0,81,976	1/1:0,7:7:18.06:226,18,0	0/0:29,0:22:31.26:0,31,418	0/0:20,0:14:20.59:0,21,330	1/1:2,17:18:39.33:429,39,0	1/1:2,15:17:37.65:442,38,0	1/1:0,35:35:60.19:749,60,0	0/0:23,0:23:68.77:0,69,736	1/1:1,17:17:36.11:453,36,0	1/1:3,18:19:47.96:516,48,0	1/1:4,5:7:8.96:100,9,0	1/1:2,18:20:53.79:630,54,0	1/1:0,15:13:33.10:408,33,0	1/1:2,16:17:42.04:487,42,0	1/1:4,25:29:52.38:646,52,0	0/0:19,0:19:50.78:0,51,501	1/1:1,37:38:83.91:1011,84,0	0/0:27,0:27:81.16:0,81,1025	1/1:1,11:11:32.94:334,33,0	1/1:3,16:17:35.88:409,36,0	1/1:5,44:49:93.14:1203,93,0	1/1:1,16:17:42.12:510,42,0	1/1:0,9:8:21.06:254,21,0	1/1:4,33:36:75.47:917,75,0	1/1:3,20:23:49.50:615,50,0	0/0:19,0:19:53.31:0,53,579	1/1:3,23:25:59.85:688,60,0	0/0:4,0:4:12.04:0,12,163
chr10	98724559	.	C	CA	11760.31	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-3.627;DP=598;FS=16.936;HRun=0;HaplotypeScore=89.0401;InbreedingCoeff=0.4905;MQ=67.68;MQ0=9;MQRankSum=-0.993;QD=21.27;ReadPosRankSum=4.630;VQSLOD=5.3094;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:35.74:36,0,48	1/1:8,0:8:21.02:248,21,0	0/1:27,0:20:1.92:2,0,285	0/0:20,0:14:32.75:0,33,240	1/1:20,0:19:39.37:416,39,0	1/1:15,0:15:39:456,39,0	1/1:36,0:36:60.19:763,60,0	0/1:24,0:24:28.48:134,0,28	1/1:17,0:16:36.11:454,36,0	1/1:21,0:19:47.86:517,48,0	1/1:9,0:7:12.01:125,12,0	1/1:19,1:20:57.08:690,57,0	1/1:14,0:12:33.11:419,33,0	1/1:17,0:16:42.05:516,42,0	1/1:27,0:27:60.03:708,60,0	0/0:19,1:20:10.16:0,10,417	1/1:35,1:36:84.26:1054,84,0	0/1:24,0:24:0.69:1,0,45	1/1:11,0:10:30:324,30,0	1/1:18,0:16:38.90:413,39,0	1/1:45,0:45:99:1300,111,0	1/1:16,0:16:45.11:539,45,0	1/1:9,0:8:21.07:270,21,0	1/1:36,0:36:81.53:963,82,0	1/1:23,0:22:53.49:625,53,0	0/1:18,0:18:51.06:51,0,53	1/1:25,1:25:63.14:737,63,0	0/0:5,0:5:3.13:0,3,7
chr10	98724735	.	TCA	T	899.56	PASS	AB=0.868;AC=12;AF=0.231;AN=52;BaseQRankSum=3.468;DP=646;FS=1.315;HRun=0;HaplotypeScore=95.1881;InbreedingCoeff=-0.1569;MQ=65.45;MQ0=7;MQRankSum=0.584;QD=3.45;ReadPosRankSum=0.891;VQSLOD=2.3218;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,13:35:15.03:159,15,0	0/0:8,0:8:6:0,6,69	./.	./.	0/0:9,0:8:3.01:0,3,45	0/0:14,0:14:12.03:0,12,159	0/1:31,6:38:99:121,0,314	0/0:28,0:28:13.77:0,14,150	0/0:15,0:15:27.02:0,27,329	0/0:20,0:18:14.94:0,15,174	0/1:14,1:15:11.65:12,0,174	0/1:36,4:40:14.38:14,0,569	0/1:10,2:13:60.07:60,0,117	0/1:15,4:19:99:110,0,113	0/1:21,2:23:29.18:29,0,347	0/0:21,0:22:30.08:0,30,408	0/0:32,1:33:0.45:0,0,358	0/1:19,14:35:14.66:411,0,15	0/1:14,1:15:20.78:21,0,50	0/0:11,0:11:17.88:0,18,195	0/0:61,1:61:30.35:0,30,618	0/1:15,1:16:52.58:53,0,77	0/0:12,1:13:12.04:0,12,158	0/0:40,3:45:3.86:0,4,767	0/0:15,0:15:16.74:0,17,240	0/0:17,0:17:15.02:0,15,169	0/1:9,2:11:35.62:56,0,36	0/0:8,0:7:6:0,6,69
chr10	98727898	.	CTACA	C	2786.01	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.138;DP=796;FS=2.506;HRun=0;HaplotypeScore=125.3766;InbreedingCoeff=0.9956;MQ=79.05;MQ0=0;MQRankSum=-2.901;QD=45.67;ReadPosRankSum=4.218;VQSLOD=4.5355;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,43:45:99:2093,108,0	0/0:10,0:10:30.10:0,30,823	0/0:20,0:20:57.17:0,57,1426	0/0:27,0:27:69.20:0,69,1785	0/0:26,0:26:78.27:0,78,2102	0/0:37,0:35:99:0,108,2923	0/0:29,0:29:87.28:0,87,2321	0/0:40,0:40:99:0,120,3082	0/0:35,0:35:99:0,105,2718	0/0:29,0:28:81.27:0,81,2142	0/0:16,0:16:48.16:0,48,1299	0/0:34,0:34:99:0,99,2712	0/0:23,0:23:69.21:0,69,1775	0/0:44,0:44:99:0,126,3448	0/0:37,0:37:99:0,111,2984	0/0:33,0:33:99:0,99,2657	0/0:41,0:41:99:0,123,3251	1/1:2,14:16:42.14:814,42,0	0/0:34,0:34:90.24:0,90,2466	0/0:36,0:36:99:0,105,2838	0/0:32,0:32:93.31:0,93,2419	0/0:20,0:20:51.18:0,51,1381	0/0:23,0:23:66.20:0,66,1677	0/0:25,0:25:66.19:0,66,1655	0/0:21,0:21:63.22:0,63,1725	0/0:27,0:27:78.24:0,78,1994	0/0:30,0:30:90.29:0,90,2401	0/0:6,0:6:18.06:0,18,493
chr10	98728336	.	ACACACACACATG	A	2162.20	PASS	AB=0.612;AC=5;AF=0.089;AN=56;BaseQRankSum=9.322;DP=1201;FS=0.000;HRun=0;HaplotypeScore=429.2315;InbreedingCoeff=0.6948;MQ=53.08;MQ0=7;MQRankSum=0.448;QD=23.25;ReadPosRankSum=-2.440;VQSLOD=0.1578;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:55:34.31:0,34,696	0/0:14,0:14:24.07:0,24,1011	0/0:33,0:19:26.81:0,27,484	0/0:55,0:36:50.78:0,51,890	0/0:26,0:26:45.13:0,45,1756	0/0:25,0:25:50.95:0,51,1974	0/0:34,0:33:62.74:0,63,2393	1/1:25,21:43:14.17:624,14,0	0/0:48,0:47:98.98:0,99,3181	0/0:62,0:62:99:0,143,4567	0/0:28,0:28:59.63:0,60,2291	0/0:65,0:65:99:0,132,5074	0/0:47,0:47:78.94:0,79,3264	0/0:48,0:47:99:0,102,3603	0/0:57,0:56:99:0,105,4331	0/0:33,0:33:72.15:0,72,2597	0/0:54,0:54:99:0,125,4298	0/0:35,0:34:2.73:0,3,869	0/0:12,0:12:24.03:0,24,646	0/0:29,0:29:41.99:0,42,1505	0/0:150,0:144:99:0,330,13950	0/0:44,0:44:54.07:0,54,2430	0/0:22,0:22:38.99:0,39,1769	0/0:64,0:62:99:0,135,5353	0/0:33,0:33:39.03:0,39,1756	0/1:15,26:40:57.52:1515,0,58	0/0:29,0:29:62.89:0,63,2096	1/1:5,1:6:11.98:146,12,0
chr10	98728357	.	CAT	C	813.37	PASS	AB=0.849;AC=3;AF=0.054;AN=56;BaseQRankSum=6.235;DP=1242;FS=0.626;HRun=0;HaplotypeScore=246.1458;InbreedingCoeff=-0.0487;MQ=50.01;MQ0=19;MQRankSum=-4.559;QD=6.78;ReadPosRankSum=-0.142;VQSLOD=3.1135;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:34,15:47:99:290,0,324	0/0:16,0:16:42.11:0,42,762	0/0:44,0:13:15.34:0,15,553	0/0:60,0:20:60.13:0,60,1061	0/0:28,0:27:63.19:0,63,1197	0/0:23,0:23:60:0,60,1133	0/0:38,0:37:87.02:0,87,1581	0/0:35,0:32:90.13:0,90,1331	0/0:50,0:48:99:0,120,2031	0/0:64,0:63:99:0,183,3356	0/0:21,0:21:63.22:0,63,1276	0/0:73,0:73:99:0,162,3109	0/0:44,0:44:90.15:0,90,1708	0/0:52,0:51:99:0,117,2243	0/0:49,0:48:99:0,102,2028	0/0:36,0:36:99:0,105,1932	0/0:61,0:60:99:0,140,2848	0/1:24,10:32:99:612,0,446	0/0:23,0:15:45.04:0,45,770	0/0:24,0:24:60.12:0,60,1098	0/0:170,2:166:99:0,440,8275	0/0:40,0:40:81.15:0,81,1454	0/0:27,0:27:60.14:0,60,1081	0/0:68,3:70:99:0,174,3297	0/0:29,0:29:48.16:0,48,970	0/1:35,0:35:1.12:1,0,633	0/0:26,0:26:66.20:0,66,1225	0/0:9,0:9:20.91:0,21,230
chr10	98728495	.	GCA	G	17082.35	PASS	AB=0.844;AC=46;AF=0.821;AN=56;BaseQRankSum=1.506;DP=1071;FS=1.841;HRun=0;HaplotypeScore=243.4661;InbreedingCoeff=0.6981;MQ=44.37;MQ0=42;MQRankSum=2.519;QD=19.77;ReadPosRankSum=2.923;VQSLOD=4.8611;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:32:6.02:0,6,98	1/1:1,3:4:6.02:78,6,0	0/0:81,0:9:12.04:0,12,204	0/0:60,0:7:4.55:0,5,109	1/1:10,7:16:28.09:348,28,0	1/1:1,19:20:29.99:387,30,0	1/1:10,35:43:66.12:1283,66,0	1/1:11,18:27:19.75:576,20,0	1/1:12,33:43:74.08:902,74,0	1/1:12,24:33:65.63:1040,66,0	1/1:2,8:10:14.83:191,15,0	1/1:8,52:60:99:1441,114,0	1/1:10,20:29:66.15:809,66,0	1/1:7,40:47:62.59:798,63,0	1/1:17,27:41:68.43:937,68,0	0/0:28,0:28:75.13:0,75,1193	1/1:11,25:36:83.84:1131,84,0	0/1:17,2:20:31.80:32,0,182	0/1:21,6:19:0.77:161,0,1	1/1:8,11:19:30.07:388,30,0	1/1:112,73:174:99:3102,253,0	1/1:10,11:21:33.10:421,33,0	1/1:4,14:18:14.83:188,15,0	1/1:27,33:59:64.27:829,64,0	1/1:7,14:21:26.98:349,27,0	1/1:18,17:29:65.16:769,65,0	1/1:4,11:14:39.12:496,39,0	1/1:5,15:20:33.11:427,33,0
chr10	98728555	.	A	ATG	1413.43	PASS	AB=0.984;AC=23;AF=0.411;AN=56;BaseQRankSum=4.394;DP=828;FS=14.041;HRun=0;HaplotypeScore=341.4782;InbreedingCoeff=-0.4679;MQ=38.51;MQ0=16;MQRankSum=-6.256;QD=2.36;ReadPosRankSum=10.506;VQSLOD=0.2135;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:4.70:0,5,21	1/1:3,0:3:2.93:19,3,0	0/0:37,0:8:15.01:0,15,194	0/0:50,0:14:20.51:0,21,340	0/1:15,0:14:48.90:53,0,49	0/1:15,0:14:5.58:6,0,129	0/1:27,0:29:33.93:34,0,100	0/0:10,0:9:21.70:0,22,240	0/1:42,0:41:99:218,0,106	0/1:28,0:26:11.08:11,0,506	1/1:10,0:10:2.34:22,2,0	0/1:43,0:44:99:176,0,152	0/1:32,0:31:71.44:266,0,71	0/1:44,0:42:99:118,0,170	0/1:43,0:42:99:122,0,173	0/0:30,0:30:78.24:0,78,1208	0/1:33,0:35:71.04:71,0,318	0/0:34,0:31:44.48:0,44,495	0/1:23,0:16:24.59:25,0,160	0/1:10,0:10:74.29:74,0,123	0/1:101,14:107:75.85:76,0,441	0/1:25,0:24:30.30:61,0,30	0/1:13,0:13:39.01:39,0,59	0/0:35,0:34:18:0,18,185	0/1:25,0:24:39.43:39,0,116	0/1:21,0:18:48.78:49,0,125	0/1:15,0:14:78.63:79,0,100	0/1:7,0:7:15.17:15,0,76
chr10	98728557	.	G	GCA	8785.01	PASS	AB=0.815;AC=46;AF=0.821;AN=56;BaseQRankSum=-1.544;DP=798;FS=2.481;HRun=0;HaplotypeScore=312.7046;InbreedingCoeff=0.3859;MQ=37.76;MQ0=14;MQRankSum=1.368;QD=12.90;ReadPosRankSum=0.494;VQSLOD=3.9304;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,1:32:2.65:51,3,0	1/1:1,2:3:2.99:51,3,0	0/0:36,0:8:14.88:0,15,164	0/0:52,0:15:22.14:0,22,228	1/1:5,8:12:18.04:277,18,0	1/1:9,5:13:9.81:111,10,0	1/1:21,10:30:32.02:456,32,0	1/1:7,2:8:3.01:51,3,0	1/1:18,22:40:43.02:744,43,0	1/1:19,6:24:29.24:386,29,0	1/1:4,5:9:6.01:102,6,0	1/1:14,28:42:40.97:766,41,0	1/1:9,21:31:58.24:1029,58,0	1/1:20,22:41:30.10:508,30,0	1/1:18,18:36:41.88:673,42,0	0/0:28,0:28:69.22:0,69,887	0/1:21,11:33:99:542,0,182	0/1:30,0:31:60.65:61,0,112	0/1:14,4:13:39.44:226,0,39	1/1:6,5:11:15.05:254,15,0	1/1:92,22:104:56.33:884,56,0	1/1:16,10:25:18.04:302,18,0	1/1:5,6:11:11.79:178,12,0	0/1:26,9:34:12.22:12,0,99	1/1:14,11:24:12.01:178,12,0	1/1:10,10:18:36.11:554,36,0	1/1:7,7:13:18.06:290,18,0	1/1:6,2:8:6.02:101,6,0
chr10	98728566	.	CGA	C	1977.51	PASS	AB=0.904;AC=27;AF=0.482;AN=56;BaseQRankSum=2.399;DP=757;FS=9.228;HRun=0;HaplotypeScore=326.8478;InbreedingCoeff=-0.3607;MQ=37.27;MQ0=11;MQRankSum=-1.797;QD=3.23;ReadPosRankSum=-6.473;VQSLOD=0.4096;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,4:29:4.54:48,5,0	1/1:3,0:3:2.92:17,3,0	0/0:39,1:8:15.72:0,16,310	0/0:51,2:17:18.32:0,18,566	0/1:10,1:10:4.98:65,0,5	0/1:9,0:10:30.30:78,0,30	0/1:24,4:29:15.30:15,0,252	0/0:5,0:3:3.01:0,3,33	0/1:39,3:40:59.44:206,0,59	0/1:15,0:14:48.39:48,0,145	0/1:8,1:9:11.95:12,0,27	0/1:48,0:49:99:100,0,159	0/1:30,2:32:99:243,0,260	0/1:40,2:41:30.77:112,0,31	1/1:32,3:35:41.03:265,41,0	0/0:28,0:29:75.26:0,75,1436	0/1:31,2:35:60.90:61,0,404	0/1:17,10:29:99:283,0,634	0/1:7,5:12:99:155,0,114	0/1:11,0:10:8.68:61,0,9	0/1:84,17:90:99:126,0,325	0/1:18,4:23:16.09:74,0,16	0/1:10,0:10:12.28:44,0,12	0/1:29,4:32:7.61:8,0,144	1/1:26,0:25:10.62:79,11,0	0/0:18,0:18:20.88:0,21,464	0/1:12,0:11:40.10:40,0,43	0/1:4,0:4:2.14:2,0,44
chr10	98728569	.	ATG	A	116.41	PASS	AB=0.966;AC=11;AF=0.196;AN=56;BaseQRankSum=4.326;DP=735;FS=3.520;HRun=0;HaplotypeScore=326.4704;InbreedingCoeff=-0.0024;MQ=36.45;MQ0=11;MQRankSum=-2.796;QD=0.62;ReadPosRankSum=-3.465;VQSLOD=1.3459;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,1:33:10.41:11,0,10	0/1:4,0:4:0:0,0,0	0/0:39,1:8:18.02:0,18,292	0/0:51,0:17:42.71:0,43,719	0/0:9,0:9:2.49:0,2,25	0/1:11,0:10:48.73:49,0,71	0/0:28,0:26:23.14:0,23,309	0/0:5,0:3:3.01:0,3,53	0/0:41,0:39:9.42:0,9,101	0/1:14,0:13:13.52:14,0,172	0/0:8,1:9:2.88:0,3,50	0/0:51,0:50:30.42:0,30,286	0/1:32,0:31:9.41:9,0,308	0/0:42,1:41:4.21:0,4,74	1/1:32,0:32:5.55:40,6,0	0/0:30,0:30:75.24:0,75,1411	0/0:30,0:30:20.91:0,21,359	0/0:32,0:29:44.39:0,44,584	0/0:12,0:11:13.39:0,13,201	0/0:10,2:11:2.80:0,3,28	0/0:92,2:82:10.91:0,11,459	0/0:20,1:21:2.39:0,2,49	0/0:9,1:10:1.57:0,2,5	0/0:29,0:28:5.88:0,6,41	0/1:22,1:22:0.27:1,0,0	0/1:17,2:19:19.72:20,0,432	0/1:13,0:12:25.46:25,0,68	0/1:5,1:6:61.51:77,0,62
chr10	98728571	.	G	GCA	4595.16	PASS	AB=0.772;AC=35;AF=0.673;AN=52;BaseQRankSum=0.618;DP=768;FS=7.777;HRun=0;HaplotypeScore=325.8494;InbreedingCoeff=0.0998;MQ=36.00;MQ0=13;MQRankSum=-1.819;QD=7.36;ReadPosRankSum=-0.277;VQSLOD=3.3662;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,7:34:5.79:88,0,6	1/1:2,2:4:2.95:19,3,0	0/0:41,0:8:15.01:0,15,171	0/0:54,0:17:23.16:0,23,428	./.	0/1:5,6:10:26.14:105,0,26	1/1:18,12:28:14.92:243,15,0	1/1:4,3:5:3.01:50,3,0	1/1:22,20:41:5.28:191,5,0	1/1:7,7:13:24.56:378,25,0	./.	0/1:29,20:49:0.44:277,0,0	1/1:12,21:32:20.09:536,20,0	0/1:20,24:44:2.35:45,0,2	1/1:14,18:33:5.99:84,6,0	0/0:31,0:31:63.19:0,63,794	0/1:16,7:30:95.98:341,0,96	0/1:25,7:29:77.43:529,0,77	0/1:12,2:11:87.61:107,0,88	1/1:8,4:11:3.01:50,3,0	0/1:75,18:86:58.37:185,0,58	0/1:13,8:21:0.05:0,0,0	1/1:3,7:10:2.74:51,3,0	0/1:23,6:31:28.48:39,0,28	0/1:15,9:23:0.20:0,0,0	1/1:11,10:21:48.14:758,48,0	1/1:9,7:14:17.42:259,17,0	1/1:3,3:6:17.99:261,18,0
chr10	98728573	.	A	ACG	2493.25	PASS	AB=0.973;AC=29;AF=0.518;AN=56;BaseQRankSum=1.255;DP=814;FS=12.176;HRun=0;HaplotypeScore=356.3458;InbreedingCoeff=-0.2760;MQ=35.95;MQ0=15;MQRankSum=-1.896;QD=3.82;ReadPosRankSum=3.136;VQSLOD=0.8378;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,7:36:23.39:100,0,23	1/1:5,0:5:1.08:3,1,0	0/0:40,0:7:17.98:0,18,209	0/0:54,1:17:39.16:0,39,553	0/1:11,0:11:0:0,0,0	0/1:14,0:13:33.18:68,0,33	0/1:36,0:33:70.95:97,0,71	0/1:11,0:9:16.34:16,0,63	0/1:45,0:42:31.75:141,0,32	1/1:18,0:16:13.89:231,14,0	0/0:8,0:8:3:0,3,25	0/1:49,0:48:39.82:161,0,40	0/1:35,0:35:36.34:299,0,36	0/1:48,0:46:15.95:33,0,16	0/1:35,0:35:15.35:65,0,15	0/0:32,0:32:75.20:0,75,1060	0/1:31,0:31:99:166,0,226	0/1:27,6:30:99:453,0,189	0/1:15,0:12:35.65:36,0,191	1/1:12,0:11:3:32,3,0	0/1:90,13:90:69.83:70,0,183	0/1:23,0:23:0.35:0,0,0	1/1:12,0:12:2.55:28,3,0	0/1:33,0:32:22.80:23,0,81	0/0:27,0:26:2.88:0,3,25	0/1:20,0:20:17.08:337,0,17	1/1:18,0:17:0.79:160,1,0	1/1:6,0:6:11.41:128,11,0
chr10	98728580	.	CAT	C	976.14	PASS	AB=0.891;AC=21;AF=0.389;AN=54;BaseQRankSum=4.277;DP=856;FS=9.197;HRun=0;HaplotypeScore=366.7580;InbreedingCoeff=-0.2715;MQ=36.38;MQ0=23;MQRankSum=-0.961;QD=1.96;ReadPosRankSum=-3.955;VQSLOD=0.1546;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:36:0.38:0,0,50	1/1:3,1:4:2.84:14,3,0	0/0:37,0:7:17.71:0,18,246	0/0:58,0:18:43.60:0,44,774	0/1:12,0:12:14.48:25,0,14	0/1:13,1:13:46.45:46,0,84	0/1:37,4:37:54.68:55,0,259	0/0:15,0:12:29.89:0,30,326	0/1:33,9:40:64.31:233,0,64	0/1:27,3:27:99:149,0,386	./.	0/1:34,16:49:99:106,0,112	0/1:34,5:38:99:104,0,300	1/1:41,8:47:3.71:46,4,0	0/1:30,7:37:53.74:54,0,75	0/0:30,0:30:75.22:0,75,1410	0/1:28,2:30:99:122,0,417	0/1:25,2:31:38.50:38,0,651	0/1:17,0:13:7:7,0,296	0/1:10,4:13:15.41:23,0,15	0/0:110,1:97:9.14:0,9,366	1/1:23,3:26:5.07:38,5,0	0/1:13,1:14:11.99:12,0,31	0/0:33,2:34:20.50:0,21,246	0/1:20,6:25:16.50:16,0,34	0/0:20,0:19:56.21:0,56,673	0/1:17,2:17:46.16:46,0,170	0/0:7,0:7:20.41:0,20,214
chr10	98728581	.	ATG	A	468.65	PASS	AB=0.983;AC=19;AF=0.339;AN=56;BaseQRankSum=5.439;DP=834;FS=3.685;HRun=0;HaplotypeScore=355.8561;InbreedingCoeff=-0.2554;MQ=36.81;MQ0=23;MQRankSum=-2.254;QD=1.02;ReadPosRankSum=-2.336;VQSLOD=1.0102;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:36:0.36:0,0,49	0/1:5,0:5:5.23:5,0,16	0/0:33,0:6:17.09:0,17,273	0/0:57,0:18:45.23:0,45,808	0/1:10,0:10:39.51:44,0,40	0/1:13,2:14:51.47:51,0,101	0/0:42,1:39:1.78:0,2,448	0/0:15,0:12:30.10:0,30,519	0/1:40,0:38:64.76:162,0,65	0/1:28,2:27:84.10:84,0,534	0/1:7,0:7:0:0,0,0	0/1:43,0:42:48.36:48,0,139	0/1:36,2:37:77.86:78,0,233	0/1:46,0:44:6.60:19,0,7	0/1:36,0:36:13.78:14,0,125	0/0:29,0:30:75.26:0,75,1445	0/1:31,0:31:45.16:45,0,451	0/1:34,0:31:25.10:25,0,602	0/1:16,0:12:12.12:12,0,267	0/1:13,1:13:4.13:6,0,4	0/0:111,1:97:29.92:0,30,415	1/1:23,3:26:2.74:9,3,0	0/1:13,0:13:7.53:8,0,26	0/0:31,1:31:20.44:0,20,290	0/0:23,1:23:4.13:0,4,56	0/0:21,0:20:48.39:0,48,672	0/1:19,0:17:1.44:1,0,220	0/0:7,0:7:21.02:0,21,235
chr10	98728589	.	ACG	A	421.65	PASS	AB=0.996;AC=16;AF=0.286;AN=56;BaseQRankSum=3.931;DP=924;FS=8.409;HRun=0;HaplotypeScore=388.6073;InbreedingCoeff=-0.2317;MQ=37.24;MQ0=30;MQRankSum=-0.543;QD=0.73;ReadPosRankSum=-5.738;VQSLOD=0.0020;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,9:36:11.23:76,11,0	0/0:8,0:8:8.89:0,9,56	0/0:28,2:6:15.52:0,16,244	0/0:46,1:17:12.33:0,12,726	0/1:15,0:14:7.77:8,0,91	0/1:16,0:15:23.09:23,0,130	0/1:45,0:41:21.21:21,0,547	0/0:30,1:25:8.76:0,9,715	0/1:43,0:41:76.12:76,0,182	0/1:42,0:38:75.31:75,0,839	0/1:9,0:9:8.52:34,0,9	0/0:48,0:47:18.46:0,18,336	0/0:36,0:35:16.86:0,17,480	0/1:52,0:50:24.01:24,0,39	0/1:42,0:40:37.48:37,0,149	0/0:29,0:29:72.18:0,72,1308	0/0:31,0:30:34.24:0,34,622	0/1:34,2:33:51.39:51,0,707	0/0:18,0:11:20.60:0,21,307	0/1:18,0:17:11.19:11,0,44	0/1:127,0:112:23.66:24,0,479	0/1:31,0:31:51.48:65,0,51	0/0:14,0:13:5.60:0,6,73	0/1:41,0:39:16.97:17,0,225	0/1:27,0:26:38.68:39,0,42	0/0:24,0:22:46.20:0,46,1108	0/0:19,0:17:27.15:0,27,428	0/0:7,0:7:21.02:0,21,300
chr10	98728592	.	CAT	C	67.75	PASS	AB=0.984;AC=9;AF=0.161;AN=56;BaseQRankSum=2.290;DP=959;FS=2.052;HRun=0;HaplotypeScore=400.4457;InbreedingCoeff=0.0126;MQ=37.93;MQ0=32;MQRankSum=1.029;QD=0.21;ReadPosRankSum=-5.838;VQSLOD=0.4356;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:35:10.23:38,10,0	0/0:8,0:8:6.14:0,6,118	0/0:29,0:6:17.33:0,17,237	0/0:48,0:18:36.03:0,36,846	0/0:16,0:15:7.89:0,8,201	0/1:15,0:14:5.42:5,0,234	0/0:49,1:46:23.10:0,23,1091	0/0:37,0:30:81.14:0,81,1364	0/0:44,1:43:28.49:0,28,346	0/1:47,0:43:44:44,0,1179	0/1:7,0:7:46.50:47,0,47	0/0:45,0:44:15.29:0,15,482	0/0:37,0:36:11.75:0,12,499	0/0:51,0:50:3.49:0,3,141	0/0:43,0:41:9.05:0,9,268	0/0:29,0:29:75.26:0,75,1504	0/0:33,1:31:18.36:0,18,907	0/0:36,0:33:8.05:0,8,840	0/1:19,2:13:23.13:23,0,370	0/1:18,0:17:4.68:5,0,89	0/1:134,0:119:13.67:14,0,738	0/0:33,0:33:6.61:0,7,194	0/0:15,0:14:5.98:0,6,99	0/1:42,1:41:26.62:27,0,335	0/0:26,0:25:14.36:0,14,146	0/0:25,0:23:68.93:0,69,1308	0/0:20,0:17:32.92:0,33,521	0/0:11,0:11:27.07:0,27,480
chr10	98728593	.	ATG	A	1325.89	PASS	AB=0.966;AC=20;AF=0.357;AN=56;BaseQRankSum=1.523;DP=969;FS=7.914;HRun=0;HaplotypeScore=395.7762;InbreedingCoeff=-0.4645;MQ=38.44;MQ0=33;MQRankSum=2.305;QD=1.84;ReadPosRankSum=-6.683;VQSLOD=-0.3201;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,1:35:1.85:24,2,0	0/1:8,0:8:18.30:18,0,72	0/0:28,0:6:3.67:0,4,175	0/0:48,0:18:41.25:0,41,768	0/1:16,2:17:99:115,0,153	0/1:15,0:14:61.03:61,0,194	0/1:51,1:48:14.67:15,0,1113	0/0:40,0:33:90.30:0,90,1632	0/1:41,2:42:49.91:50,0,249	0/1:44,5:45:99:327,0,1049	0/1:7,0:7:51.31:83,0,51	0/1:46,2:47:81.70:82,0,326	0/1:36,1:36:99:104,0,372	0/1:50,1:50:36.79:37,0,131	0/1:45,0:44:99:121,0,191	0/0:29,0:29:75.26:0,75,1471	0/0:31,1:31:24.27:0,24,947	0/1:34,1:32:32.30:32,0,591	0/1:19,2:13:50.96:51,0,286	0/1:17,1:17:46.64:75,0,47	0/1:126,6:117:99:188,0,691	0/1:32,1:33:47.48:47,0,165	0/0:14,0:13:5.68:0,6,75	0/1:42,0:42:36.67:37,0,303	0/1:25,1:25:19.02:19,0,67	0/0:25,0:23:69.21:0,69,1329	0/0:20,0:17:25.84:0,26,470	0/0:11,0:11:27.09:0,27,519
chr10	98728604	.	C	CAT	7154.07	PASS	AB=0.800;AC=22;AF=0.393;AN=56;BaseQRankSum=-1.015;DP=1087;FS=11.902;HRun=0;HaplotypeScore=397.5768;InbreedingCoeff=-0.6599;MQ=38.95;MQ0=39;MQRankSum=1.597;QD=8.11;ReadPosRankSum=-0.071;VQSLOD=3.4451;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:35,2:36:25.34:63,0,25	0/1:3,5:9:16.90:169,0,17	0/0:25,0:2:3.01:0,3,49	0/0:39,0:13:32.15:0,32,379	0/1:20,2:21:99:268,0,153	0/1:11,6:16:99:237,0,113	0/1:44,13:53:99:347,0,874	0/0:58,0:50:99:0,135,1759	0/1:31,12:41:99:579,0,187	0/1:48,14:58:99:1219,0,786	0/1:8,1:9:43.37:43,0,50	0/1:29,21:49:99:532,0,195	0/1:25,10:34:99:429,0,285	0/1:42,14:55:99:305,0,104	0/1:24,23:45:99:386,0,134	0/0:34,0:33:89.93:0,90,1226	0/1:34,4:35:99:200,0,628	0/1:31,3:31:99:354,0,268	0/1:29,2:19:99:214,0,209	0/1:14,8:21:18.75:303,0,19	0/1:127,36:148:99:660,0,554	0/1:17,16:33:99:246,0,154	0/1:11,4:14:40.95:41,0,43	0/1:42,10:49:99:105,0,272	0/1:20,10:29:42.97:285,0,43	0/0:34,1:33:34.19:0,34,1189	0/1:14,5:16:99:166,0,299	0/0:13,0:13:27.09:0,27,434
chr10	98728689	.	GCA	G	9930.15	PASS	AB=0.634;AC=27;AF=0.482;AN=56;BaseQRankSum=2.195;DP=939;FS=21.312;HRun=0;HaplotypeScore=276.3592;InbreedingCoeff=0.0798;MQ=43.51;MQ0=29;MQRankSum=-0.367;QD=14.84;ReadPosRankSum=3.800;VQSLOD=3.1345;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:47:90.27:0,90,1492	0/1:6,10:15:99:239,0,111	0/0:37,0:19:29.87:0,30,506	0/0:39,0:11:30.10:0,30,488	1/1:8,12:17:26.93:320,27,0	0/1:6,10:15:11.84:300,0,12	1/1:17,26:38:26.38:786,26,0	0/0:34,0:33:75.26:0,75,1263	0/1:17,20:35:44.47:607,0,44	0/1:12,41:46:20.97:1297,0,21	1/1:5,12:16:18.05:232,18,0	0/1:19,17:36:99:390,0,129	0/1:11,21:30:49.48:515,0,49	0/1:12,23:34:37.54:516,0,38	0/1:9,21:29:25.01:402,0,25	0/0:23,0:23:51.17:0,51,860	0/1:11,9:18:21.96:312,0,22	0/0:32,1:30:81.28:0,81,1353	0/1:13,6:12:8.84:233,0,9	1/1:4,11:15:27.07:343,27,0	1/1:57,100:141:99:1988,142,0	1/1:6,20:24:35.61:441,36,0	0/1:8,9:16:33.38:139,0,33	0/1:19,22:39:13.70:324,0,14	1/1:16,15:30:10.43:373,10,0	0/0:40,2:42:69.75:0,70,1673	0/1:2,6:7:30.35:175,0,30	0/0:15,0:15:42.11:0,42,671
chr10	98728700	.	CAT	C	3439.32	PASS	AB=0.994;AC=24;AF=0.429;AN=56;BaseQRankSum=5.788;DP=943;FS=16.620;HRun=0;HaplotypeScore=305.7869;InbreedingCoeff=-0.1761;MQ=43.23;MQ0=21;MQRankSum=-0.060;QD=5.03;ReadPosRankSum=1.327;VQSLOD=1.6684;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:90.24:0,90,1775	0/1:14,1:14:61.27:96,0,61	0/0:29,0:15:29.03:0,29,623	0/0:34,0:13:22.60:0,23,502	1/1:22,0:19:12.43:90,12,0	0/1:16,0:16:12.89:124,0,13	0/1:42,0:37:7.37:248,0,7	0/0:32,0:31:90.26:0,90,1653	0/1:35,0:33:26.78:281,0,27	0/1:58,1:52:60.31:434,0,60	0/1:18,0:17:4.78:71,0,5	0/1:37,0:36:54.29:169,0,54	0/1:35,0:33:33.61:214,0,34	0/1:38,0:37:30.24:198,0,30	0/1:29,0:28:18.61:123,0,19	0/0:18,0:18:54.16:0,54,1044	1/1:16,0:17:2.42:125,2,0	0/0:40,0:37:93.13:0,93,1708	0/1:18,0:12:59.16:62,0,59	1/1:15,1:16:9.70:124,10,0	0/1:152,2:141:6.22:604,0,6	1/1:31,0:29:4.40:167,4,0	0/1:20,0:19:34.67:43,0,35	0/1:37,0:36:19.56:100,0,20	0/1:32,0:30:39.83:108,0,40	0/0:39,0:39:87.27:0,87,2028	0/1:12,0:11:29.54:59,0,30	0/0:14,0:14:42.11:0,42,775
chr10	98728739	.	GCA	G	6133.22	PASS	AB=0.669;AC=26;AF=0.464;AN=56;BaseQRankSum=-2.863;DP=923;FS=4.031;HRun=0;HaplotypeScore=253.8840;InbreedingCoeff=-0.0384;MQ=38.75;MQ0=27;MQRankSum=3.371;QD=8.79;ReadPosRankSum=2.860;VQSLOD=4.2761;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:49:42.13:0,42,688	0/1:7,4:11:87.86:103,0,88	0/0:11,0:3:6.02:0,6,103	0/0:29,0:10:21.07:0,21,338	1/1:10,8:18:17.92:232,18,0	0/1:6,8:14:40.93:139,0,41	0/1:23,30:46:8.94:612,0,9	0/0:22,0:20:48.16:0,48,818	0/1:19,16:33:86.03:139,0,86	0/1:35,27:52:99:1080,0,341	1/1:5,9:13:12.04:158,12,0	0/1:20,23:42:99:129,0,226	0/1:9,11:20:99:173,0,176	0/1:12,20:31:95.54:96,0,113	0/1:9,19:27:62.26:138,0,62	0/0:19,0:19:54.18:0,54,913	0/1:14,12:26:41.48:336,0,41	0/0:39,0:42:94.16:0,94,1477	0/1:12,8:12:72.70:266,0,73	1/1:4,15:17:17.49:236,17,0	1/1:75,92:158:4.99:1068,5,0	1/1:11,22:33:34.18:468,34,0	0/1:11,11:22:33.21:164,0,33	0/1:20,9:29:39.53:91,0,40	1/1:18,18:33:15.08:228,15,0	0/0:39,1:37:99:0,102,1716	0/1:7,9:15:24.37:278,0,24	0/0:9,0:9:21.04:0,21,330
chr10	98728748	.	CAT	C	2405.87	PASS	AB=0.948;AC=23;AF=0.411;AN=56;BaseQRankSum=2.935;DP=957;FS=3.818;HRun=0;HaplotypeScore=251.9656;InbreedingCoeff=-0.2515;MQ=38.15;MQ0=38;MQRankSum=2.583;QD=3.36;ReadPosRankSum=6.911;VQSLOD=2.1091;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:50:42.11:0,42,818	0/1:10,0:10:37.15:37,0,108	0/0:18,0:2:6.02:0,6,122	0/0:30,0:7:21.06:0,21,335	0/1:19,1:19:2.47:142,0,2	0/1:13,0:13:41.62:42,0,74	0/1:52,5:51:59.59:199,0,60	0/0:22,0:19:57.15:0,57,1041	0/1:29,3:30:59.59:60,0,103	0/1:64,2:57:99:524,0,512	1/1:13,0:12:11.65:70,12,0	0/1:42,4:45:42.09:42,0,299	0/1:23,1:24:61.93:62,0,228	0/1:34,0:33:53.77:54,0,165	0/1:28,1:28:43.89:44,0,54	0/0:21,0:21:63.16:0,63,1130	0/1:20,3:23:29.27:165,0,29	0/0:39,1:40:75.95:0,76,1611	0/1:27,1:17:99:129,0,196	1/1:19,0:18:16.56:92,17,0	0/1:155,9:155:23.27:386,0,23	1/1:30,2:32:8.81:176,9,0	0/1:23,1:24:52.29:52,0,85	0/1:23,5:28:23.33:23,0,52	0/1:36,1:35:28.94:105,0,29	0/0:47,0:44:99:0,103,2107	0/1:14,1:14:34.06:175,0,34	0/0:10,0:10:20.86:0,21,377
chr10	98728793	.	ACG	A	2286.36	PASS	AB=0.846;AC=23;AF=0.411;AN=56;BaseQRankSum=5.830;DP=880;FS=15.896;HRun=0;HaplotypeScore=204.6939;InbreedingCoeff=-0.2986;MQ=44.97;MQ0=13;MQRankSum=-3.733;QD=3.22;ReadPosRankSum=1.184;VQSLOD=1.4033;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,9:37:23.34:235,23,0	1/1:10,2:12:1.17:41,1,0	0/0:32,0:9:14.67:0,15,159	0/0:31,1:7:11.22:0,11,190	0/1:15,3:18:1.08:15,0,1	0/0:12,5:16:2.22:0,2,7	0/1:51,9:59:99:283,0,265	0/0:14,0:13:0.50:0,1,101	0/1:21,11:31:28.68:55,0,29	0/1:33,8:39:84.95:365,0,85	0/1:7,2:9:23.01:30,0,23	0/1:32,18:50:20.26:250,0,20	1/1:23,5:28:22.86:117,23,0	0/1:34,8:42:35.27:104,0,35	0/1:27,6:32:29.31:29,0,37	0/0:21,0:21:57.17:0,57,923	0/1:18,6:24:99:133,0,111	0/1:17,5:21:35.57:197,0,36	0/1:21,6:26:99:216,0,103	0/0:11,0:10:5.19:0,5,27	0/1:140,20:147:85.46:85,0,346	0/1:21,3:24:8.07:36,0,8	0/0:18,0:18:6.28:0,6,54	0/1:23,12:35:17.79:164,0,18	0/1:22,3:24:38.97:40,0,39	0/0:23,0:23:3.33:0,3,156	0/1:13,0:12:38.56:39,0,73	0/1:12,0:12:1.54:8,0,2
chr10	98728807	.	ACG	A	8256.64	PASS	AB=0.938;AC=49;AF=0.875;AN=56;BaseQRankSum=2.987;DP=842;FS=0.688;HRun=0;HaplotypeScore=174.7852;InbreedingCoeff=0.7194;MQ=43.99;MQ0=8;MQRankSum=-0.730;QD=10.89;ReadPosRankSum=-1.109;VQSLOD=3.9901;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:33,5:33:20.97:222,21,0	1/1:9,5:14:14.99:172,15,0	0/0:31,0:6:7.42:0,7,120	0/0:33,0:8:12.62:0,13,176	1/1:9,10:18:17.96:212,18,0	1/1:14,4:17:8.91:65,9,0	1/1:44,17:60:55.68:649,56,0	1/1:1,9:10:25.52:303,26,0	1/1:18,12:30:28.36:327,28,0	1/1:29,13:39:89.56:1049,90,0	1/1:4,5:9:6.49:82,6,0	1/1:36,10:46:36.43:407,36,0	1/1:11,14:25:35.88:446,36,0	1/1:28,16:42:20.95:248,21,0	1/1:19,9:27:12:127,12,0	0/0:20,0:20:57.18:0,57,992	1/1:28,3:31:45.74:382,46,0	0/1:14,1:14:20.58:225,0,21	1/1:15,6:21:60.01:672,60,0	1/1:8,3:10:11.88:118,12,0	1/1:130,21:139:76.27:757,76,0	1/1:11,14:25:14.73:127,15,0	1/1:9,7:16:15:159,15,0	1/1:27,4:31:17.83:215,18,0	1/1:13,14:26:25.05:236,25,0	1/1:7,10:17:45.09:589,45,0	1/1:9,5:13:14.80:128,15,0	1/1:0,15:15:24.08:343,24,0
chr10	98728811	.	GCA	G	2073.67	PASS	AB=0.986;AC=36;AF=0.643;AN=56;BaseQRankSum=5.112;DP=842;FS=2.910;HRun=0;HaplotypeScore=200.9182;InbreedingCoeff=-0.2566;MQ=44.33;MQ0=10;MQRankSum=-1.327;QD=2.62;ReadPosRankSum=8.258;VQSLOD=1.7407;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:30:11.14:56,11,0	1/1:13,0:13:8.67:56,9,0	0/1:32,0:5:5.31:5,0,134	0/0:31,1:8:17.63:0,18,236	1/1:20,0:19:6.82:66,7,0	0/1:15,2:17:22.60:23,0,37	0/1:53,1:53:62.29:131,0,62	0/1:12,0:12:40.95:80,0,41	0/1:30,0:30:18.72:137,0,19	0/1:42,0:39:17.71:292,0,18	0/1:10,0:10:19.37:19,0,37	0/1:44,0:44:1.74:115,0,2	1/1:28,0:28:14.91:210,15,0	0/1:44,0:42:47.19:73,0,47	0/1:26,0:26:15.33:15,0,82	0/0:19,0:19:54.18:0,54,925	0/1:31,1:32:60.02:101,0,60	0/1:17,1:17:63.43:63,0,71	1/1:21,0:21:13.74:198,14,0	1/1:13,0:12:2.62:18,3,0	0/1:144,2:137:74.01:74,0,284	1/1:25,0:25:2.78:18,3,0	0/1:17,0:17:15.16:27,0,15	1/1:33,0:33:14.44:78,14,0	0/1:33,0:32:26.88:27,0,78	0/1:21,0:21:99:149,0,103	1/1:11,0:10:11.01:54,11,0	1/1:15,0:15:23.67:154,24,0
chr10	98728859	.	ATG	A	37.73	PASS	AB=0.927;AC=4;AF=0.071;AN=56;BaseQRankSum=6.127;DP=1031;FS=15.531;HRun=0;HaplotypeScore=241.3687;InbreedingCoeff=0.2585;MQ=42.40;MQ0=22;MQRankSum=-4.300;QD=0.37;ReadPosRankSum=-0.604;VQSLOD=0.8911;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,2:30:3.09:12,3,0	0/0:17,1:18:16.35:0,16,330	0/0:33,1:5:11.67:0,12,174	0/1:39,1:3:20.66:43,0,21	0/0:15,0:13:10.28:0,10,186	0/0:20,0:20:6.92:0,7,476	0/0:74,0:72:99:0,100,1899	0/0:22,0:21:60.19:0,60,1117	0/0:32,0:32:53.01:0,53,845	0/0:56,0:52:99:0,138,2489	0/0:17,0:16:8.33:0,8,260	0/0:43,0:43:56.50:0,56,991	0/0:18,0:18:37.73:0,38,662	0/0:44,0:43:53.71:0,54,1032	0/0:30,1:30:38.20:0,38,836	0/0:22,0:22:66.23:0,66,1270	0/0:43,2:45:99:0,102,2031	0/1:25,4:28:81.34:81,0,527	0/0:36,0:31:86.61:0,87,1478	0/0:16,0:14:18.06:0,18,344	0/0:178,7:174:99:0,194,3575	0/0:21,0:21:24.06:0,24,474	0/0:14,0:13:12.04:0,12,230	0/0:63,1:64:77.55:0,78,1506	0/0:42,0:38:54.08:0,54,1067	0/0:30,1:30:87.26:0,87,1697	0/0:12,0:12:23.73:0,24,364	0/0:17,0:17:40.42:0,40,691
chr10	98728905	.	A	ACG	391.28	PASS	AB=0.775;AC=2;AF=0.036;AN=56;BaseQRankSum=6.350;DP=950;FS=4.529;HRun=0;HaplotypeScore=206.5383;InbreedingCoeff=-0.0371;MQ=48.47;MQ0=13;MQRankSum=-5.511;QD=5.84;ReadPosRankSum=-3.927;VQSLOD=2.2625;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,13:35:33.96:48,0,34	0/0:22,0:22:47.21:0,47,646	0/0:34,0:15:36.98:0,37,462	0/0:39,0:20:51.55:0,52,609	0/0:17,0:16:42.11:0,42,597	0/0:19,0:19:30.05:0,30,432	0/0:50,0:48:78.37:0,78,1108	0/0:19,0:18:45.10:0,45,573	0/0:30,0:30:55.11:0,55,819	0/0:55,0:53:99:0,150,2136	0/0:20,0:19:21.06:0,21,300	0/0:38,0:38:57.06:0,57,812	0/0:20,0:20:45.14:0,45,664	0/0:33,0:33:68.50:0,69,1018	0/0:27,0:27:51.15:0,51,729	0/0:27,0:27:78.26:0,78,1192	0/0:43,0:43:41.46:0,41,1380	0/1:21,7:27:83.74:432,0,84	0/0:27,0:19:45.92:0,46,670	0/0:20,0:18:27.08:0,27,392	0/0:144,0:136:99:0,253,3610	0/0:20,0:20:42.13:0,42,619	0/0:14,0:11:18.05:0,18,254	0/0:65,0:65:99:0,123,1750	0/0:33,0:30:47.77:0,48,689	0/0:34,0:32:84.28:0,84,1264	0/0:17,0:17:42.02:0,42,555	0/0:15,0:14:39.09:0,39,548
chr10	98732542	.	AT	A	1903.07	PASS	AB=0.550;AC=5;AF=0.089;AN=56;BaseQRankSum=10.119;DP=614;FS=3.511;HRun=7;HaplotypeScore=57.7394;InbreedingCoeff=0.7811;MQ=72.86;MQ0=0;MQRankSum=-0.094;QD=22.66;ReadPosRankSum=-1.930;VQSLOD=2.8070;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.25:0,90,1100	0/0:12,0:12:33.10:0,33,405	0/0:18,0:18:44.91:0,45,514	0/0:14,0:14:38.07:0,38,410	0/0:28,0:28:75.23:0,75,932	0/0:30,0:30:81.26:0,81,1019	0/0:18,0:18:54.15:0,54,653	1/1:5,35:40:99:1027,102,0	0/0:14,0:14:42.11:0,42,501	0/0:28,0:28:78.24:0,78,968	0/0:14,0:14:36.11:0,36,442	0/0:22,0:22:60.18:0,60,742	0/0:16,0:16:42.12:0,42,511	0/0:16,0:16:45.13:0,45,544	0/0:30,0:30:81.23:0,81,982	0/0:31,0:31:90.27:0,90,1107	0/0:26,0:26:72.23:0,72,906	0/0:27,0:27:75.21:0,75,914	0/0:14,0:14:39.11:0,39,468	0/0:26,0:26:78.23:0,78,967	0/0:16,0:16:45.13:0,45,552	0/0:22,0:22:60.19:0,60,754	0/0:16,0:16:48.15:0,48,604	0/0:14,0:14:39.12:0,39,483	0/0:26,0:26:66.21:0,66,829	0/1:6,27:33:22.41:730,0,22	0/0:21,0:21:60.18:0,60,741	1/1:2,9:11:27.06:275,27,0
chr10	98733052	.	C	CA	10912.20	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-12.907;DP=554;FS=9.206;HRun=8;HaplotypeScore=54.7757;InbreedingCoeff=0.9932;MQ=81.62;MQ0=0;MQRankSum=0.471;QD=28.34;ReadPosRankSum=2.095;VQSLOD=5.1678;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.02:0,48,439	1/1:1,13:14:33.10:381,33,0	0/0:19,0:19:13.09:0,13,153	0/0:12,0:12:16.92:0,17,142	1/1:3,17:20:48.14:553,48,0	1/1:3,15:19:44.97:499,45,0	1/1:3,18:21:48.14:554,48,0	0/0:23,0:23:63.03:0,63,577	1/1:2,12:14:30.09:346,30,0	1/1:3,21:24:60.18:693,60,0	1/1:1,20:21:32.71:630,33,0	1/1:3,10:13:27.08:312,27,0	1/1:1,9:10:27.08:312,27,0	1/1:2,9:11:24.07:277,24,0	1/1:2,26:28:78.23:900,78,0	0/0:16,0:16:48.03:0,48,439	1/1:4,13:17:33.10:381,33,0	0/0:32,0:32:84.01:0,84,764	1/1:0,21:21:60.15:680,60,0	1/1:5,16:21:48.07:525,48,0	1/1:5,20:25:51.15:589,51,0	1/1:1,22:23:63.19:727,63,0	1/1:2,19:21:60.17:685,60,0	1/1:1,14:15:42.12:485,42,0	1/1:2,22:24:63.19:727,63,0	0/0:30,0:30:72.03:0,72,658	1/1:0,23:23:57.15:658,57,0	0/0:19,0:19:51.03:0,51,466
chr10	98734608	.	T	TA	10255.02	PASS	AB=0.628;AC=36;AF=0.643;AN=56;BaseQRankSum=-16.316;DP=682;FS=11.489;HRun=10;HaplotypeScore=80.8347;InbreedingCoeff=0.7217;MQ=75.86;MQ0=0;MQRankSum=-1.840;QD=21.19;ReadPosRankSum=2.319;VQSLOD=5.1631;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:31:46.85:0,47,135	0/1:5,5:10:6.60:142,0,7	0/0:18,0:20:25.08:0,25,247	0/0:16,0:17:20.89:0,21,161	1/1:5,23:28:19.85:610,20,0	1/1:0,12:12:33.08:352,33,0	0/1:8,12:22:7.33:307,0,7	0/0:7,0:39:62.04:0,62,179	1/1:5,18:23:45.11:480,45,0	1/1:9,26:36:37.74:783,38,0	1/1:1,25:27:68.29:750,68,0	1/1:4,13:17:36.09:384,36,0	1/1:6,18:24:45.11:480,45,0	1/1:12,16:28:51.09:527,51,0	1/1:9,22:31:41.52:647,42,0	0/0:24,0:25:57.98:0,58,455	1/1:4,22:26:60.15:640,60,0	0/0:2,0:22:37.13:0,37,107	0/1:11,15:26:11.38:447,0,11	1/1:6,30:36:34.93:782,35,0	1/1:3,11:14:27.07:288,27,0	1/1:1,20:21:57.14:608,57,0	0/1:7,14:21:10.18:313,0,10	1/1:6,17:24:47.95:494,48,0	1/1:4,20:24:32.50:551,32,0	0/0:3,0:28:50.92:0,51,147	1/1:9,23:33:46.93:670,47,0	0/0:1,0:13:24.44:0,24,71
chr10	98735484	.	GC	G	4892.39	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=4.887;DP=417;FS=31.394;HRun=11;HaplotypeScore=83.3859;InbreedingCoeff=0.8635;MQ=66.60;MQ0=7;MQRankSum=-0.775;QD=14.65;ReadPosRankSum=6.169;VQSLOD=3.1111;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:21.68:0,22,167	1/1:5,5:10:13.94:136,14,0	0/0:17,0:10:14.85:0,15,128	0/0:21,0:13:26.83:0,27,212	1/1:1,7:8:14.97:123,15,0	1/1:2,11:12:29.91:245,30,0	1/1:6,20:26:52.91:424,53,0	1/1:8,0:8:2.96:22,3,0	1/1:6,11:17:32.75:270,33,0	1/1:2,12:13:26.78:221,27,0	1/1:2,6:8:20.86:164,21,0	1/1:6,10:15:31.76:238,32,0	1/1:4,8:11:23.21:181,23,0	1/1:4,9:12:31.43:239,31,0	1/1:4,9:13:29.76:230,30,0	0/0:7,0:7:11.99:0,12,101	1/1:9,15:23:48.10:373,48,0	0/0:13,1:14:8.35:0,8,233	1/1:5,6:11:14.77:122,15,0	1/1:6,10:16:29.53:231,30,0	1/1:9,30:36:56.82:459,57,0	1/1:2,11:13:26.81:221,27,0	1/1:0,4:4:11.98:98,12,0	1/1:9,18:27:59.48:459,59,0	1/1:5,7:12:14.81:114,15,0	1/1:5,5:10:10.98:80,11,0	1/1:3,9:12:29.61:225,30,0	1/1:8,0:7:2.81:14,3,0
chr10	98735487	.	C	CT	3789.10	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=7.122;DP=436;FS=4.315;HRun=0;HaplotypeScore=94.8243;InbreedingCoeff=0.9268;MQ=65.33;MQ0=12;MQRankSum=-0.985;QD=11.59;ReadPosRankSum=6.997;VQSLOD=3.7427;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:56.47:0,56,479	1/1:11,1:12:25.96:149,26,0	0/0:17,0:10:20.16:0,20,257	0/0:21,0:13:38.73:0,39,452	1/1:8,0:8:5.15:55,5,0	1/1:13,0:12:32.11:188,32,0	1/1:27,1:28:50.86:323,51,0	0/0:10,0:9:23.87:0,24,189	1/1:17,0:17:36.95:218,37,0	1/1:16,0:15:25.53:169,26,0	1/1:9,1:10:5.15:90,5,0	1/1:13,2:14:31.87:218,32,0	1/1:13,0:11:27.03:156,27,0	1/1:14,1:13:18.04:155,18,0	1/1:12,1:13:30.57:180,31,0	0/0:6,0:6:17.89:0,18,143	1/1:27,2:27:54.27:297,54,0	0/0:13,0:13:27.24:0,27,339	1/1:12,0:11:10.53:178,11,0	1/1:14,0:14:30.52:162,31,0	1/1:37,3:37:53.57:345,54,0	1/1:15,0:15:30.78:168,31,0	1/1:4,0:4:10.81:48,11,0	1/1:28,4:32:49.72:370,50,0	1/1:10,0:10:19.88:118,20,0	0/0:10,0:10:13.42:0,13,203	1/1:9,2:11:29.06:202,29,0	0/0:8,0:7:9:0,9,79
chr10	98735494	.	CCGTGTGTGTGTGTGTGT	C	2425.42	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=-1.690;DP=487;FS=1.321;HRun=0;HaplotypeScore=220.5737;InbreedingCoeff=-0.5836;MQ=54.64;MQ0=17;MQRankSum=3.071;QD=5.90;ReadPosRankSum=3.842;VQSLOD=2.0361;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:33.73:0,34,1264	0/1:16,0:17:80.80:81,0,1254	0/0:12,0:5:14.85:0,15,128	0/0:18,0:10:26.83:0,27,212	0/1:13,0:13:25.14:25,0,868	0/1:17,0:16:37.02:37,0,1581	0/1:32,0:32:99:149,0,2392	1/1:7,0:6:2.95:22,3,0	0/1:15,0:16:99:155,0,996	0/1:20,0:18:99:105,0,1426	0/1:9,0:9:72.34:72,0,478	0/1:19,0:18:78.14:78,0,1328	0/1:12,0:11:90.05:90,0,986	0/1:15,0:14:99:169,0,909	0/1:16,0:16:99:109,0,1131	0/0:7,0:7:15:0,15,302	0/1:33,0:31:99:148,0,2189	0/0:16,0:16:10.19:0,10,366	0/1:14,0:13:64.96:65,0,563	0/1:14,0:15:89.42:89,0,854	0/1:46,0:40:99:272,0,1699	0/1:20,0:18:99:152,0,1279	0/1:8,0:7:58.93:59,0,322	0/1:34,0:35:99:242,0,2395	0/1:13,0:14:68.35:68,0,1227	0/1:6,0:6:54.68:164,0,55	0/1:14,0:14:87.39:87,0,900	1/1:3,7:9:2.98:146,3,0
chr10	98735495	.	C	CGTGT	3876.47	PASS	AB=1.000;AC=37;AF=0.740;AN=50;BaseQRankSum=-0.495;DP=501;FS=2.919;HRun=0;HaplotypeScore=150.1163;InbreedingCoeff=0.4032;MQ=52.44;MQ0=17;MQRankSum=1.042;QD=9.36;ReadPosRankSum=-0.438;VQSLOD=3.2060;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:15.04:0,15,206	1/1:17,0:17:17.80:328,18,0	./.	./.	1/1:13,0:13:9.01:136,9,0	0/1:17,0:16:76.83:82,0,77	1/1:32,2:34:27.86:375,28,0	./.	1/1:18,0:18:14.24:161,14,0	1/1:21,0:19:8.94:110,9,0	1/1:9,1:10:6.01:100,6,0	1/1:21,0:20:6.90:91,7,0	1/1:15,0:13:12:185,12,0	1/1:17,0:15:15.03:219,15,0	1/1:20,0:20:15.05:278,15,0	0/0:5,0:5:3.01:0,3,46	1/1:33,1:31:25.33:388,25,0	0/0:12,0:16:2.44:0,2,27	0/1:14,0:13:15.50:16,0,22	1/1:15,0:15:6.02:130,6,0	0/1:50,0:44:11.53:118,0,12	1/1:22,0:20:15.03:260,15,0	1/1:9,1:9:2.67:25,3,0	1/1:34,1:35:15.08:373,15,0	1/1:14,0:14:13.86:271,14,0	0/0:6,0:6:3:0,3,28	1/1:17,0:17:15.29:230,15,0	0/0:8,0:7:3:0,3,28
chr10	98735759	.	GAGACAGAC	G	787.15	PASS	AB=0.714;AC=3;AF=0.054;AN=56;BaseQRankSum=4.822;DP=716;FS=1.102;HRun=0;HaplotypeScore=185.1323;InbreedingCoeff=0.5894;MQ=70.28;MQ0=10;MQRankSum=-5.668;QD=19.20;ReadPosRankSum=-0.345;VQSLOD=2.4740;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,19:26:26.80:678,27,0	0/0:7,0:7:12.04:0,12,410	0/0:37,0:20:12.04:0,12,286	0/0:57,0:35:22.15:0,22,552	0/0:15,0:15:21.07:0,21,866	0/0:21,0:21:45.15:0,45,1744	0/0:32,0:32:63.22:0,63,2358	0/0:41,0:40:39.13:0,39,988	0/0:23,0:23:42.14:0,42,1624	0/0:18,0:18:33.11:0,33,1283	0/0:14,0:14:12.50:0,12,396	0/0:21,0:21:45.15:0,45,1623	0/0:27,0:27:63.17:0,63,2224	0/0:28,0:28:57.20:0,57,2251	0/0:20,0:21:39.12:0,39,1439	0/0:25,0:25:57.20:0,57,2215	0/0:40,0:40:84.27:0,84,3322	0/1:9,6:15:41.96:215,0,42	0/0:22,0:22:24.08:0,24,799	0/0:20,0:20:26.75:0,27,1053	0/0:53,0:53:99:0,99,3764	0/0:22,0:23:24.07:0,24,732	0/0:22,0:22:32.85:0,33,1175	0/0:34,0:36:60.19:0,60,2163	0/0:12,0:12:15.05:0,15,557	0/0:12,0:23:42.60:0,43,1202	0/0:27,0:27:45.15:0,45,1836	0/0:3,0:10:15.05:0,15,524
chr10	98735954	.	A	ACCTTTC	3514.23	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.611;DP=824;FS=0.000;HRun=0;HaplotypeScore=199.2108;InbreedingCoeff=0.9994;MQ=70.96;MQ0=2;MQRankSum=-9.287;QD=70.28;ReadPosRankSum=-0.142;VQSLOD=3.9002;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,23:35:78.27:2555,78,0	0/0:14,0:14:39.08:0,39,779	0/0:32,0:26:66.19:0,66,1465	0/0:35,0:25:63.01:0,63,1287	0/0:26,0:26:69.97:0,70,1636	0/0:21,0:21:54.18:0,54,1269	0/0:36,0:36:84.22:0,84,1764	0/0:40,0:40:99:0,108,2326	0/0:28,0:28:75.24:0,75,1636	0/0:33,0:33:90.29:0,90,1953	0/0:22,0:22:63.22:0,63,1457	0/0:28,0:28:81.28:0,81,1891	0/0:24,0:24:69.24:0,69,1548	0/0:35,0:35:87.28:0,87,1907	0/0:39,0:39:99:0,105,2422	0/0:40,0:40:99:0,111,2560	0/0:23,0:23:60.18:0,60,1311	1/1:6,9:15:27.09:959,27,0	0/0:31,0:31:80.30:0,80,1845	0/0:23,0:23:60.20:0,60,1352	0/0:44,0:44:99:0,123,2702	0/0:31,0:31:93.32:0,93,2172	0/0:21,0:21:60.18:0,60,1363	0/0:43,0:43:99:0,110,2403	0/0:23,0:23:63.20:0,63,1440	0/0:40,0:40:99:0,111,2562	0/0:24,0:24:63.17:0,63,1379	0/0:17,0:17:48.16:0,48,1113
chr10	98735963	.	C	CTCTTG	8770.53	PASS	AC=50;AF=0.962;AN=52;BaseQRankSum=-0.748;DP=843;FS=0.000;HRun=0;HaplotypeScore=158.1245;InbreedingCoeff=0.4572;MQ=66.78;MQ0=20;MQRankSum=-0.495;QD=12.32;ReadPosRankSum=-1.500;VQSLOD=3.5645;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,2:33:8.95:182,9,0	1/1:11,1:12:3.01:83,3,0	./.	./.	1/1:18,6:24:9.92:221,10,0	1/1:17,3:19:6.02:166,6,0	1/1:27,7:33:6.02:165,6,0	1/1:41,0:41:18.96:116,19,0	1/1:17,8:25:21.07:543,21,0	1/1:26,5:33:18:342,18,0	1/1:23,2:25:20.62:387,21,0	1/1:22,10:32:18.06:484,18,0	1/1:18,5:23:18.06:493,18,0	1/1:23,9:33:15.05:415,15,0	1/1:28,8:35:30.10:790,30,0	0/0:38,0:38:30.10:0,30,529	1/1:20,3:23:24.06:582,24,0	1/1:17,1:17:5.91:65,6,0	1/1:28,1:29:9.03:205,9,0	1/1:18,7:26:18.06:469,18,0	1/1:41,0:42:21.02:303,21,0	1/1:28,3:30:15.05:374,15,0	1/1:17,5:22:9.03:249,9,0	1/1:38,5:43:41.49:886,41,0	1/1:19,4:24:9.03:249,9,0	1/1:44,0:44:15.05:309,15,0	1/1:19,3:22:30.03:647,30,0	1/1:15,0:15:3.01:46,3,0
chr10	98736109	.	ACCACC	A	10597.44	PASS	AB=0.992;AC=29;AF=0.518;AN=56;BaseQRankSum=12.311;DP=736;FS=10.081;HRun=0;HaplotypeScore=191.9008;InbreedingCoeff=-0.5085;MQ=78.70;MQ0=2;MQRankSum=-9.328;QD=17.75;ReadPosRankSum=13.910;VQSLOD=1.2661;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:14,11:25:14.56:284,15,0	0/1:6,0:7:37.32:52,0,37	0/0:44,0:36:83.20:0,83,1701	0/0:56,0:44:66.40:0,66,1592	0/1:15,0:15:9.91:255,0,10	0/1:24,0:24:97.79:492,0,98	0/1:34,0:33:99:485,0,108	0/1:18,0:18:87.82:366,0,88	0/1:20,0:20:19.85:471,0,20	0/1:21,0:21:87.83:397,0,88	0/1:13,0:13:61.74:139,0,62	0/1:38,0:38:34.91:873,0,35	0/1:24,0:25:38.82:484,0,39	1/1:31,0:31:9.23:749,9,0	0/1:32,0:32:36.83:665,0,37	0/0:37,0:37:99:0,108,2965	0/1:41,0:40:12.72:858,0,13	1/1:9,15:24:30.10:569,30,0	0/1:24,0:24:99:177,0,240	0/1:16,0:16:37.34:304,0,37	0/1:35,0:35:99:285,0,144	0/1:19,0:19:99:214,0,117	1/1:12,0:12:7.20:293,7,0	0/1:42,0:42:31.52:764,0,32	0/1:23,0:23:70.84:331,0,71	0/1:28,0:28:99:500,0,194	0/1:23,0:23:12.83:507,0,13	0/1:7,0:7:42.94:84,0,43
chr10	98736110	.	CCACCA	C	18913.50	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=0.317;DP=740;FS=1.564;HRun=0;HaplotypeScore=169.0486;InbreedingCoeff=0.9302;MQ=80.52;MQ0=3;MQRankSum=-8.126;QD=31.95;ReadPosRankSum=7.153;VQSLOD=4.5212;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:14.33:283,14,0	1/1:3,4:7:6.02:114,6,0	0/0:50,0:39:68.81:0,69,1359	0/0:59,0:45:57.50:0,57,1335	1/1:3,12:15:24.08:457,24,0	1/1:6,18:24:45.15:857,45,0	1/1:10,23:32:42.14:800,42,0	1/1:6,12:18:33.11:628,33,0	1/1:3,17:20:45.15:857,45,0	1/1:6,15:21:39.13:730,39,0	1/1:6,7:13:15.05:286,15,0	1/1:6,32:38:80.86:1542,81,0	1/1:7,18:25:45.15:857,45,0	1/1:3,28:31:69.24:1309,69,0	1/1:7,25:32:65.90:1257,66,0	0/0:37,0:37:87.29:0,87,2375	1/1:7,34:40:90.31:1715,90,0	1/1:23,0:23:30.10:569,30,0	1/1:12,11:23:33.06:495,33,0	1/1:3,13:16:33.04:555,33,0	1/1:15,20:35:30.10:572,30,0	1/1:8,11:19:21.07:400,21,0	1/1:1,11:12:27.09:514,27,0	1/1:3,37:40:78.27:1487,78,0	1/1:6,17:23:30.10:571,30,0	1/1:11,17:28:48.16:914,48,0	1/1:3,20:23:51.17:972,51,0	1/1:3,4:7:9.03:171,9,0
chr10	98737315	.	T	TA	2354.80	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.510;DP=716;FS=1.693;HRun=1;HaplotypeScore=171.7863;InbreedingCoeff=0.9993;MQ=94.00;MQ0=0;MQRankSum=1.963;QD=39.91;ReadPosRankSum=-1.247;VQSLOD=2.9739;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:98.95:0,99,1141	0/0:11,0:11:30.10:0,30,389	0/0:35,0:35:92.92:0,93,1139	0/0:28,0:29:73.83:0,74,885	0/0:35,0:34:99:0,102,1286	0/0:19,0:19:57.17:0,57,717	0/0:25,0:25:75.21:0,75,943	1/1:2,27:29:84.25:1194,84,0	0/0:21,0:21:60.19:0,60,778	0/0:27,0:27:78.25:0,78,1013	0/0:24,0:24:72.22:0,72,918	0/0:33,0:33:99:0,99,1259	0/0:28,0:28:81.24:0,81,1033	0/0:22,0:22:66.20:0,66,842	0/0:26,0:26:75.20:0,75,954	0/0:36,0:36:99:0,99,1285	0/0:33,0:33:96.24:0,96,1193	0/0:11,0:11:30.10:0,30,389	0/0:16,0:16:48.13:0,48,594	0/0:30,0:30:75.23:0,75,957	0/0:33,0:33:96.28:0,96,1214	0/0:33,0:33:93.21:0,93,1153	0/0:19,0:19:48.12:0,48,605	0/0:22,0:22:66.19:0,66,840	0/0:21,0:21:63.13:0,63,773	1/1:0,21:21:60.20:899,60,0	0/0:28,0:28:81.26:0,81,1048	1/1:0,9:9:27.09:405,27,0
chr10	98737344	.	A	ACTACTGGTGTTTGGC	9209.43	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.235;DP=674;FS=0.000;HRun=0;HaplotypeScore=322.2771;InbreedingCoeff=0.9988;MQ=90.93;MQ0=0;MQRankSum=-10.733;QD=167.44;ReadPosRankSum=0.961;VQSLOD=4.4179;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,19:40:99:6975,102,0	0/0:9,0:9:27.07:0,27,877	0/0:32,0:32:90.24:0,90,3491	0/0:27,0:27:63.55:0,64,2225	0/0:30,0:29:87.30:0,87,3672	0/0:23,0:23:66.18:0,66,2626	0/0:27,0:27:75.24:0,75,2850	0/0:27,0:27:75.25:0,75,2717	0/0:24,0:24:69.24:0,69,3127	0/0:24,0:24:69.23:0,69,2831	0/0:22,0:22:60.21:0,60,2636	0/0:33,0:33:99:0,99,4226	0/0:31,0:31:90.31:0,90,3887	0/0:18,0:18:51.18:0,51,2075	0/0:28,0:28:84.26:0,84,3323	0/0:29,0:29:81.26:0,81,3368	0/0:33,0:33:96.30:0,96,3900	1/1:8,5:15:33.11:2234,33,0	0/0:19,0:19:51.14:0,51,1835	0/0:18,0:18:51.11:0,51,1997	0/0:40,0:40:99:0,111,4631	0/0:31,0:31:90.27:0,90,3600	0/0:16,0:16:48.12:0,48,1806	0/0:19,0:19:57.20:0,57,2521	0/0:13,0:13:39.13:0,39,1615	0/0:19,0:19:54.17:0,54,2210	0/0:18,0:18:51.16:0,51,2209	0/0:9,0:9:27.09:0,27,1168
chr10	98738240	.	T	TACACACAC	6186.55	PASS	AB=1.000;AC=44;AF=0.815;AN=54;BaseQRankSum=0.789;DP=474;FS=0.000;HRun=0;HaplotypeScore=127.5325;InbreedingCoeff=0.2530;MQ=61.66;MQ0=12;MQRankSum=-5.357;QD=16.54;ReadPosRankSum=-1.421;VQSLOD=3.1098;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,1:30:11.81:394,12,0	1/1:6,0:6:3.01:57,3,0	./.	0/0:41,0:21:11.91:0,12,231	1/1:19,0:21:11.91:379,12,0	1/1:16,0:16:8.99:347,9,0	1/1:22,0:22:9.03:259,9,0	0/1:26,0:25:83.99:122,0,84	0/1:8,0:8:25.84:216,0,26	1/1:16,0:17:18.95:426,19,0	1/1:11,0:12:4.21:229,4,0	1/1:11,0:10:9.03:345,9,0	1/1:15,0:14:10.28:352,10,0	1/1:15,0:15:6.01:180,6,0	1/1:11,0:11:12.04:405,12,0	0/0:16,0:17:33.09:0,33,763	1/1:20,0:20:6.02:172,6,0	1/1:12,0:13:11.97:309,12,0	1/1:14,0:12:20.94:218,21,0	1/1:8,0:9:6.02:181,6,0	0/0:17,0:17:2.68:0,3,11	1/1:8,0:7:3.01:57,3,0	1/1:11,0:11:8.95:348,9,0	1/1:17,0:17:3.01:117,3,0	1/1:16,0:17:13.35:516,13,0	0/1:20,0:19:24.03:261,0,24	1/1:15,0:15:9.03:144,9,0	0/1:18,0:18:6.50:152,0,7
chr10	98738269	.	A	ACACACACT	8396.56	PASS	AB=0.803;AC=43;AF=0.768;AN=56;BaseQRankSum=-0.226;DP=595;FS=1.968;HRun=0;HaplotypeScore=130.8118;InbreedingCoeff=0.3222;MQ=52.06;MQ0=14;MQRankSum=-3.720;QD=16.93;ReadPosRankSum=3.146;VQSLOD=4.0684;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:62.21:404,0,62	1/1:0,1:7:3.01:75,3,0	0/0:26,0:10:6.85:0,7,143	0/0:34,0:18:39.45:0,39,431	1/1:6,27:36:11.54:457,12,0	1/1:0,13:17:8.99:403,9,0	1/1:1,18:26:14.93:351,15,0	0/1:32,0:31:16.23:464,0,16	0/1:0,2:21:1.34:272,0,1	1/1:2,15:20:45.38:833,45,0	1/1:3,13:21:7.05:283,7,0	1/1:1,12:15:9.03:402,9,0	1/1:1,14:18:10.28:404,10,0	1/1:2,9:18:5.62:203,6,0	1/1:0,11:14:12.04:476,12,0	0/0:17,0:17:51.06:0,51,1003	1/1:1,16:20:6.02:209,6,0	0/1:14,0:13:99:265,0,106	1/1:17,0:15:36.08:445,36,0	1/1:1,14:22:8.81:215,9,0	0/0:5,15:22:0:0,0,0	1/1:2,6:14:3.01:75,3,0	1/1:0,15:22:8.43:401,8,0	0/1:1,10:15:3.44:128,0,3	1/1:3,17:23:13.82:608,14,0	1/1:4,0:22:28.48:595,28,0	1/1:3,13:20:15.35:240,15,0	1/1:1,0:26:12.87:189,13,0
chr10	98738935	.	C	CT	5704.22	PASS	AB=0.714;AC=36;AF=0.643;AN=56;BaseQRankSum=-7.897;DP=585;FS=7.472;HRun=11;HaplotypeScore=65.9905;InbreedingCoeff=0.3127;MQ=76.48;MQ0=1;MQRankSum=0.482;QD=12.88;ReadPosRankSum=0.049;VQSLOD=4.3853;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:35:59.25:0,59,606	1/1:3,9:13:1.06:173,1,0	0/1:19,0:19:8.38:8,0,136	0/1:9,0:9:5.95:6,0,15	1/1:8,17:26:26.70:411,27,0	1/1:6,12:17:33.07:335,33,0	1/1:9,16:27:32.12:345,32,0	0/0:18,0:18:35.75:0,36,266	0/1:6,6:13:25.60:115,0,26	1/1:10,17:28:14.45:468,14,0	1/1:5,13:18:20.18:265,20,0	1/1:7,15:22:9.97:282,10,0	1/1:3,22:25:21.65:402,22,0	1/1:4,18:22:2.20:244,2,0	0/1:8,16:25:50.23:247,0,50	0/0:20,0:21:55.81:0,56,424	0/1:7,15:22:56.07:208,0,56	0/0:27,2:30:23.89:0,24,531	0/1:7,8:16:19.99:197,0,20	1/1:3,18:22:24.57:382,25,0	1/1:1,17:19:22.95:333,23,0	1/1:4,9:13:0.69:165,1,0	0/1:6,13:19:44.71:129,0,45	1/1:1,19:20:42.08:425,42,0	1/1:11,8:20:12.25:270,12,0	0/0:26,1:31:43.43:0,43,480	0/1:10,17:26:27.62:293,0,28	0/0:7,0:7:17.90:0,18,139
chr10	98740203	.	AGT	A	1148.07	PASS	AB=0.989;AC=32;AF=0.615;AN=52;BaseQRankSum=8.129;DP=658;FS=6.948;HRun=0;HaplotypeScore=106.6876;InbreedingCoeff=-0.2635;MQ=63.51;MQ0=33;MQRankSum=-0.582;QD=2.29;ReadPosRankSum=-0.705;VQSLOD=1.6519;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:37:13.86:65,14,0	0/1:12,0:12:49.51:50,0,52	0/0:60,0:28:0:0,0,0	./.	0/1:11,0:11:12.77:13,0,73	0/1:25,0:25:77.13:104,0,77	1/1:31,0:31:11.89:83,12,0	0/0:29,0:25:2.94:0,3,18	0/1:14,0:14:21.08:106,0,21	1/1:20,0:18:2.74:17,3,0	0/1:10,0:10:21.64:22,0,37	0/1:24,0:24:10.64:120,0,11	1/1:19,0:19:9.12:71,9,0	0/1:14,0:14:13.98:34,0,14	1/1:33,0:33:37.94:245,38,0	0/1:28,6:33:40.20:40,0,587	0/1:25,0:25:8.59:9,0,223	1/1:17,0:16:8.63:49,9,0	0/1:17,0:14:12.37:12,0,15	0/1:12,0:12:29.64:30,0,56	0/1:58,0:57:34.10:34,0,36	1/1:19,0:19:2.98:22,3,0	1/1:11,0:11:8.34:44,8,0	0/1:20,0:20:8.42:55,0,8	0/0:15,0:14:9.47:0,9,93	1/1:20,0:19:8.42:42,8,0	0/1:16,0:16:14.96:34,0,15	./.
chr10	98740240	.	GTGTC	G	4212.77	PASS	AB=0.975;AC=39;AF=0.722;AN=54;BaseQRankSum=4.018;DP=595;FS=1.734;HRun=0;HaplotypeScore=125.7274;InbreedingCoeff=0.0779;MQ=52.73;MQ0=20;MQRankSum=1.342;QD=8.20;ReadPosRankSum=0.224;VQSLOD=4.1456;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:28:15.01:192,15,0	0/0:11,0:11:0.57:0,1,17	0/0:41,0:12:32.66:0,33,273	0/1:54,0:20:6.36:6,0,293	0/1:11,0:11:29.89:120,0,30	0/1:21,3:24:30.38:225,0,30	1/1:22,2:23:1.89:5,2,0	1/1:17,0:15:35.85:290,36,0	0/1:16,0:16:41.16:152,0,41	0/1:22,0:21:11.49:236,0,11	0/1:11,1:12:9.45:116,0,9	1/1:18,2:20:8.70:121,9,0	1/1:18,0:18:18.45:194,18,0	1/1:10,0:10:1.36:3,1,0	1/1:22,4:26:13.62:183,14,0	0/0:28,0:27:45.11:0,45,1153	0/1:26,1:26:99:217,0,249	1/1:18,0:18:47.51:416,48,0	1/1:12,0:10:19.27:140,19,0	0/1:20,0:19:50.28:141,0,50	1/1:57,0:55:17.32:637,17,0	1/1:13,0:13:0.47:1,0,0	1/1:9,2:11:6.49:115,6,0	1/1:20,1:21:6.96:115,7,0	0/1:16,0:15:62.86:102,0,63	1/1:20,0:19:56.65:470,57,0	1/1:16,0:16:3.67:15,4,0	./.
chr10	98740242	.	GTC	G	7037.73	PASS	AB=0.852;AC=46;AF=0.852;AN=54;BaseQRankSum=2.835;DP=588;FS=3.475;HRun=0;HaplotypeScore=102.0806;InbreedingCoeff=0.3921;MQ=53.14;MQ0=18;MQRankSum=-1.859;QD=13.61;ReadPosRankSum=-0.401;VQSLOD=4.3564;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:14.76:109,15,0	0/1:2,8:10:5.19:125,0,5	0/0:41,0:14:28.83:0,29,268	0/1:50,0:19:6.36:6,0,293	0/1:10,1:11:7.23:162,0,7	1/1:17,5:22:33.10:470,33,0	1/1:6,17:23:12.04:183,12,0	1/1:18,0:16:44.85:372,45,0	1/1:11,5:16:25.56:432,26,0	1/1:21,1:21:62.68:527,63,0	1/1:12,1:13:20.50:190,21,0	1/1:4,15:19:23.88:323,24,0	1/1:15,3:18:35.51:332,36,0	1/1:1,8:9:6.02:92,6,0	1/1:4,22:26:39.08:530,39,0	0/0:28,0:27:22.88:0,23,799	0/1:27,2:28:33.07:361,0,33	1/1:18,1:20:53.43:426,53,0	1/1:4,8:10:21.81:185,22,0	1/1:18,2:19:16.78:290,17,0	1/1:54,1:53:90.41:893,90,0	1/1:0,13:13:3.01:46,3,0	1/1:2,8:10:9:94,9,0	1/1:5,16:21:12.02:144,12,0	1/1:17,0:16:8.53:183,9,0	1/1:21,0:20:59.55:457,60,0	1/1:0,14:14:8.82:104,9,0	./.
chr10	98740476	.	C	CA	2222.86	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.974;DP=631;FS=1.707;HRun=1;HaplotypeScore=60.9308;InbreedingCoeff=0.9930;MQ=80.71;MQ0=0;MQRankSum=-1.543;QD=38.33;ReadPosRankSum=-3.268;VQSLOD=2.8411;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,165,2094	0/0:5,0:5:15.01:0,15,175	0/0:25,0:25:46.18:0,46,807	0/0:21,0:21:57.14:0,57,709	0/0:21,0:21:60.20:0,60,778	0/0:17,0:17:48.16:0,48,623	0/0:24,0:24:69.22:0,69,896	1/1:1,25:26:75.23:1083,75,0	0/0:34,0:34:99:0,99,1284	0/0:18,0:18:51.17:0,51,661	0/0:9,0:9:27.09:0,27,350	0/0:28,0:28:84.27:0,84,1090	0/0:23,0:23:69.21:0,69,881	0/0:27,0:27:81.26:0,81,1051	0/0:14,0:14:42.14:0,42,545	0/0:31,0:31:93.29:0,93,1194	0/0:20,0:20:60.18:0,60,764	0/0:34,0:34:99:0,102,1317	0/0:20,0:20:57.19:0,57,740	0/0:10,0:10:30.10:0,30,389	0/0:33,0:33:90.28:0,90,1155	0/0:19,0:19:48.16:0,48,623	0/0:21,0:21:60.17:0,60,756	0/0:20,0:20:57.15:0,57,708	0/0:16,0:16:48.16:0,48,623	1/1:1,21:22:27.29:905,27,0	0/0:26,0:26:78.08:0,78,987	1/1:0,10:10:27.02:378,27,0
chr10	98740851	.	TTTA	T	2578.76	PASS	AB=0.987;AC=28;AF=0.538;AN=52;BaseQRankSum=-4.080;DP=181;FS=31.933;HRun=0;HaplotypeScore=56.3742;InbreedingCoeff=-0.2663;MQ=48.50;MQ0=2;MQRankSum=-0.399;QD=15.82;ReadPosRankSum=2.059;VQSLOD=1.0805;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:6:60.23:60,0,75	1/1:2,0:2:4.56:46,5,0	0/0:4,0:2:6.02:0,6,74	./.	0/1:4,0:4:38.56:66,0,39	1/1:7,0:7:8.09:129,8,0	1/1:2,0:2:5.97:47,6,0	0/1:34,1:35:99:558,0,574	0/1:4,0:4:42.32:114,0,42	0/1:7,0:7:57.62:58,0,68	0/1:4,0:4:52.28:75,0,52	0/0:5,0:5:7.75:0,8,77	0/0:3,0:3:1.02:0,1,6	0/1:6,0:6:8.38:8,0,196	0/0:2,0:2:4.56:0,5,41	0/0:3,0:3:6.02:0,6,103	0/1:14,0:14:58.59:316,0,59	0/1:16,0:16:99:210,0,235	1/1:6,0:5:8.98:103,9,0	1/1:7,0:7:12.51:243,13,0	1/1:3,0:3:0.93:21,1,0	1/1:2,0:2:3.01:42,3,0	0/1:3,0:3:35.95:36,0,42	./.	0/1:7,0:7:52.77:109,0,53	0/1:6,0:6:59.71:60,0,117	0/1:5,0:5:5.33:56,0,5	0/1:14,3:17:21.09:372,0,21
chr10	98740854	.	A	AT	3949.79	PASS	AB=0.688;AC=34;AF=0.654;AN=52;BaseQRankSum=0.609;DP=174;FS=29.831;HRun=3;HaplotypeScore=45.8617;InbreedingCoeff=-0.3029;MQ=47.62;MQ0=2;MQRankSum=-1.303;QD=23.65;ReadPosRankSum=3.404;VQSLOD=1.8044;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:3,2:5:59.76:61,0,60	1/1:0,2:2:6.02:85,6,0	0/0:4,0:2:6.02:0,6,74	./.	0/1:1,2:3:24.72:66,0,25	1/1:3,4:7:18.04:235,18,0	1/1:0,2:2:5.98:63,6,0	0/1:20,13:33:99:603,0,388	0/1:1,3:4:24.83:116,0,25	0/1:3,3:6:26.16:140,0,26	0/1:3,1:4:27.67:75,0,28	0/1:3,2:5:28.14:74,0,28	1/1:1,2:3:6.02:85,6,0	0/1:5,1:6:24.91:25,0,163	0/1:2,1:3:30.78:37,0,31	0/0:2,0:2:6.02:0,6,74	0/1:4,10:14:33.95:375,0,34	0/1:12,5:17:99:277,0,167	1/1:5,3:7:11.63:134,12,0	1/1:2,5:7:21.07:296,21,0	1/1:1,1:2:6.01:68,6,0	1/1:0,1:1:3.01:43,3,0	0/1:1,1:2:26.03:26,0,28	./.	0/1:1,5:6:18.74:193,0,19	0/1:3,3:6:92.83:101,0,93	1/1:0,4:4:12.04:162,12,0	1/1:7,10:17:16.89:607,17,0
chr10	98740861	.	AT	A	2932.98	PASS	AB=0.760;AC=33;AF=0.611;AN=54;BaseQRankSum=-1.690;DP=167;FS=1.868;HRun=3;HaplotypeScore=47.5825;InbreedingCoeff=-0.0613;MQ=54.37;MQ0=2;MQRankSum=-1.532;QD=18.56;ReadPosRankSum=2.735;VQSLOD=3.1898;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:9.01:99,9,0	0/0:2,0:2:3.26:0,3,10	0/1:3,0:2:24.01:24,0,36	0/0:2,0:2:2.84:0,3,14	1/1:2,2:4:0.17:33,0,0	0/1:4,3:7:2.89:14,0,3	1/1:2,0:2:0.89:2,1,0	1/1:4,28:32:85.87:999,86,0	0/1:2,1:3:26.36:31,0,26	0/1:2,2:4:9.24:82,0,9	0/1:2,1:3:8.31:33,0,8	1/1:2,2:4:8.94:77,9,0	0/1:2,0:2:2.68:15,0,3	1/1:1,5:6:16.29:189,16,0	1/1:1,2:3:0.23:66,0,0	0/0:3,0:3:6.02:0,6,83	0/1:9,4:13:88.43:129,0,88	1/1:3,13:16:40.91:442,41,0	0/1:7,3:9:68.76:69,0,109	0/1:3,4:7:59.20:143,0,59	0/0:1,0:1:2.37:0,2,8	0/0:1,0:1:0:0,0,0	0/1:1,1:2:30.17:31,0,30	./.	0/1:5,1:6:29.41:64,0,29	1/1:1,5:6:18.04:200,18,0	1/1:5,0:5:4.96:54,5,0	1/1:8,8:16:27.54:283,28,0
chr10	98740862	.	T	TTTATTATTTA	7360.18	PASS	AB=1.000;AC=46;AF=0.885;AN=52;BaseQRankSum=0.391;DP=171;FS=11.336;HRun=0;HaplotypeScore=65.5558;InbreedingCoeff=0.2675;MQ=57.59;MQ0=2;MQRankSum=-3.097;QD=44.34;ReadPosRankSum=3.398;VQSLOD=2.9862;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:8.96:108,9,0	1/1:2,0:2:6.02:143,6,0	0/1:5,0:3:24.84:25,0,37	0/0:2,0:2:1.55:0,2,4	1/1:4,0:4:8.99:84,9,0	1/1:6,1:7:12.04:407,12,0	1/1:2,0:2:6.02:229,6,0	1/1:33,0:33:89.14:1111,89,0	1/1:3,0:3:8.92:85,9,0	1/1:3,1:4:12.04:290,12,0	0/1:4,0:4:8.04:73,0,8	1/1:2,2:4:8.77:323,9,0	1/1:1,1:2:6.02:265,6,0	1/1:6,0:6:18.06:259,18,0	1/1:3,0:3:9.03:184,9,0	0/0:2,0:2:6.02:0,6,139	1/1:12,1:13:17.99:541,18,0	1/1:16,0:16:41.65:607,42,0	1/1:10,0:9:24.07:369,24,0	1/1:6,1:7:13.60:297,14,0	1/1:1,0:1:3.01:110,3,0	./.	1/1:2,0:2:5.95:41,6,0	./.	1/1:4,2:6:11.23:360,11,0	1/1:5,0:6:17.95:248,18,0	1/1:5,2:7:12.04:421,12,0	1/1:12,0:16:41.85:782,42,0
chr10	98740866	.	T	TTATTTA	3702.77	PASS	AB=0.975;AC=28;AF=0.538;AN=52;BaseQRankSum=6.220;DP=169;FS=30.062;HRun=0;HaplotypeScore=62.5213;InbreedingCoeff=-0.5101;MQ=57.16;MQ0=2;MQRankSum=-7.675;QD=23.29;ReadPosRankSum=1.694;VQSLOD=1.6217;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:3,0:3:43.53:44,0,65	1/1:1,1:2:6.02:143,6,0	0/0:5,0:3:5.83:0,6,73	0/0:2,0:2:3.44:0,3,21	0/1:4,0:4:51.20:51,0,61	1/1:6,1:7:12.04:337,12,0	1/1:2,0:2:6.02:155,6,0	0/1:31,0:31:99:496,0,564	0/1:3,0:3:37.32:60,0,37	0/1:3,0:4:35.27:116,0,35	0/1:4,0:4:57.53:58,0,108	0/1:5,0:5:48.99:154,0,49	1/1:1,1:2:6.02:191,6,0	0/1:6,0:6:55.83:56,0,154	0/1:2,1:3:34.06:101,0,34	0/0:3,0:3:6.02:0,6,117	0/1:12,0:12:69.39:289,0,69	0/1:17,0:17:99:258,0,291	0/1:10,0:9:44.70:122,0,45	0/1:7,0:7:53.83:69,0,54	1/1:0,1:1:3.01:110,3,0	./.	0/1:2,0:2:14.63:15,0,32	./.	0/1:6,0:6:73.25:184,0,73	0/1:6,0:6:68:68,0,103	0/1:10,0:10:52.87:252,0,53	0/1:12,0:12:7.81:377,0,8
chr10	98743378	.	TCA	T	128.96	PASS	AB=0.981;AC=12;AF=0.273;AN=44;BaseQRankSum=5.057;DP=616;FS=7.415;HRun=0;HaplotypeScore=77.4556;InbreedingCoeff=-0.0186;MQ=74.42;MQ0=22;MQRankSum=-1.369;QD=0.53;ReadPosRankSum=0.257;VQSLOD=0.1178;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:28:0:0,0,0	./.	./.	0/0:52,0:35:0:0,0,0	./.	0/0:19,0:19:5.69:0,6,55	0/1:31,0:31:35.50:36,0,119	./.	0/1:23,0:23:19.63:20,0,72	0/0:16,0:16:6.01:0,6,60	./.	0/0:22,0:23:19.72:0,20,243	0/1:12,1:13:19.40:19,0,99	0/1:20,0:20:10.48:10,0,96	0/1:17,1:18:16.91:17,0,136	1/1:21,0:29:17.04:84,17,0	0/1:32,1:32:1.56:2,0,281	0/0:20,0:20:0.47:0,0,1	0/0:17,0:17:5.88:0,6,37	0/0:5,0:5:2.90:0,3,16	0/1:43,0:43:16.80:17,0,102	0/0:14,0:13:5.80:0,6,59	0/0:18,0:18:5.98:0,6,46	0/0:33,7:39:7.06:0,7,356	0/1:13,0:12:23.91:24,0,38	1/1:17,0:20:5.52:27,6,0	0/0:17,0:17:8.78:0,9,59	./.
chr10	98744360	.	TAC	T	1125.02	PASS	AB=0.874;AC=19;AF=0.365;AN=52;BaseQRankSum=7.328;DP=770;FS=5.730;HRun=0;HaplotypeScore=102.7694;InbreedingCoeff=-0.3512;MQ=61.42;MQ0=29;MQRankSum=2.711;QD=2.19;ReadPosRankSum=2.038;VQSLOD=1.7273;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,14:36:35.33:319,35,0	0/1:8,0:8:17.71:18,0,143	./.	0/0:67,0:21:2.87:0,3,38	0/1:15,3:18:9.08:9,0,259	0/1:19,2:22:53.37:53,0,160	0/1:27,6:34:43.23:43,0,264	0/1:33,0:31:16.48:16,0,37	0/1:28,4:33:99:123,0,297	0/0:23,0:23:26.82:0,27,348	0/0:15,0:14:14.90:0,15,204	0/1:22,3:25:2.21:2,0,309	0/1:24,1:27:24.21:24,0,317	0/1:21,4:26:99:105,0,305	0/1:20,3:24:78.81:79,0,286	0/0:21,1:30:8.87:0,9,342	0/1:16,3:19:63.89:64,0,316	0/1:14,12:28:35.33:224,0,35	0/0:18,0:16:9.01:0,9,96	0/1:7,3:10:24.15:24,0,70	0/1:63,4:66:52.92:53,0,804	0/0:22,0:22:17.24:0,17,260	0/0:13,0:14:12.03:0,12,162	0/1:53,5:58:86.41:86,0,923	0/0:23,0:23:15.81:0,16,177	0/1:13,0:17:1.36:31,0,1	0/1:25,1:25:2.12:2,0,538	./.
chr10	98745039	.	G	GA	2140.18	PASS	AB=0.901;AC=16;AF=0.286;AN=56;BaseQRankSum=-2.864;DP=608;FS=1.769;HRun=12;HaplotypeScore=71.8668;InbreedingCoeff=0.5524;MQ=73.32;MQ0=1;MQRankSum=1.664;QD=8.77;ReadPosRankSum=-1.824;VQSLOD=2.4920;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:30:13.99:284,14,0	0/0:6,0:6:17.90:0,18,131	0/0:31,0:22:3.26:0,3,119	0/0:20,0:20:0.50:0,0,44	0/1:21,3:25:37.14:37,0,243	0/1:20,3:23:4.67:5,0,296	0/0:26,0:28:61.61:0,62,438	1/1:9,24:34:65.19:631,65,0	0/0:15,0:15:42.65:0,43,309	0/0:14,1:15:0.62:0,1,167	0/0:14,1:15:6.61:0,7,211	0/0:18,0:19:11.93:0,12,237	0/0:14,0:15:28.81:0,29,199	0/0:19,0:21:35.40:0,35,320	0/0:25,0:26:35.71:0,36,412	1/1:22,0:22:57.42:296,57,0	0/0:29,1:32:44.34:0,44,472	1/1:3,20:24:38.69:364,39,0	0/1:22,2:24:5.97:6,0,255	0/0:12,0:13:25.68:0,26,179	0/0:29,0:30:49.61:0,50,350	0/0:22,0:22:45.99:0,46,317	0/0:12,0:12:23.80:0,24,175	0/0:16,1:17:15.79:0,16,272	0/0:23,1:24:24.46:0,24,340	1/1:10,18:31:33.97:478,34,0	0/1:16,2:19:8.61:9,0,261	1/1:3,8:12:5.14:211,5,0
chr10	98745048	.	A	AG	717.92	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=6.581;DP=604;FS=8.270;HRun=0;HaplotypeScore=75.8382;InbreedingCoeff=0.3991;MQ=72.62;MQ0=1;MQRankSum=-0.467;QD=10.56;ReadPosRankSum=5.003;VQSLOD=3.4748;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:3.52:0,4,138	0/0:6,0:6:18.06:0,18,250	0/0:33,0:22:24.64:0,25,446	0/0:19,0:18:21.96:0,22,236	0/0:25,0:25:53.20:0,53,700	0/0:23,0:23:54.28:0,54,728	0/0:25,0:25:69.15:0,69,901	0/1:34,0:34:7.75:8,0,142	0/0:17,0:17:51.12:0,51,656	0/0:17,0:17:44.91:0,45,542	0/0:14,0:14:38.37:0,38,507	0/0:21,0:21:60.82:0,61,697	0/0:15,0:15:45.04:0,45,522	0/0:19,0:19:56.85:0,57,708	0/0:25,0:25:71.67:0,72,929	1/1:0,22:22:60.20:795,60,0	0/0:32,0:32:85.87:0,86,1104	0/0:28,0:28:4.31:0,4,176	0/0:25,0:25:67.20:0,67,802	0/0:13,0:13:37.29:0,37,434	0/0:28,0:28:84.02:0,84,953	0/0:18,0:18:54.15:0,54,695	0/0:11,0:11:32.92:0,33,401	0/0:17,0:17:47.09:0,47,630	0/0:23,0:23:58.85:0,59,780	0/0:29,0:29:18.14:0,18,221	0/0:20,0:20:49.36:0,49,669	0/1:12,0:12:25.80:26,0,49
chr10	98746805	.	AAC	A	1950.16	PASS	AB=0.735;AC=41;AF=0.854;AN=48;BaseQRankSum=2.250;DP=517;FS=8.005;HRun=0;HaplotypeScore=78.9015;InbreedingCoeff=0.0410;MQ=63.65;MQ0=9;MQRankSum=-1.913;QD=4.73;ReadPosRankSum=-3.261;VQSLOD=0.8089;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:6,1:6:3.01:32,3,0	./.	./.	0/1:10,8:17:25.99:79,0,26	0/1:10,6:16:29.37:93,0,29	1/1:17,9:27:17.71:154,18,0	./.	1/1:9,5:14:6.01:65,6,0	1/1:13,2:15:8.38:65,8,0	1/1:5,3:8:6.02:65,6,0	1/1:13,8:21:12.03:129,12,0	1/1:7,2:11:11.73:111,12,0	1/1:9,1:10:9.91:98,10,0	0/1:4,5:9:7.90:113,0,8	1/1:19,0:19:8.52:42,9,0	1/1:29,18:47:12.13:302,12,0	1/1:34,0:32:11.32:55,11,0	0/1:11,0:17:11.18:11,0,11	0/0:11,0:11:9.01:0,9,112	1/1:21,8:30:2.45:31,2,0	1/1:13,5:18:8.86:97,9,0	0/1:12,2:14:2.95:56,0,3	1/1:18,12:31:17.88:175,18,0	1/1:9,6:15:15:149,15,0	1/1:12,0:12:5.85:46,6,0	1/1:13,0:12:6.01:64,6,0	1/1:6,0:5:8.52:42,9,0
chr10	98746831	.	CACACACACACACACACACACAA	C	1073.23	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=2.445;DP=588;FS=4.748;HRun=0;HaplotypeScore=240.2591;InbreedingCoeff=0.6250;MQ=52.05;MQ0=19;MQRankSum=-3.868;QD=8.94;ReadPosRankSum=-0.746;VQSLOD=2.3811;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,24:32:3.01:93,3,0	0/0:8,0:7:16.60:0,17,780	1/1:15,0:1:3:25,3,0	0/0:29,0:10:20.25:0,20,475	0/0:21,0:20:39.06:0,39,2592	0/0:18,0:18:39.13:0,39,2617	0/0:33,0:33:69.19:0,69,3756	0/1:19,0:19:99:101,0,205	0/0:16,0:16:29.30:0,29,1627	0/0:15,0:15:35.68:0,36,1475	0/0:14,0:14:25.64:0,26,1471	0/0:22,0:21:40.68:0,41,2482	0/0:13,0:13:36.95:0,37,1979	0/0:17,0:18:39.19:0,39,1993	0/0:12,0:12:27.01:0,27,1706	0/0:21,0:21:21.54:0,22,734	0/0:46,0:46:99:0,101,6170	1/1:8,23:29:11.83:723,12,0	0/0:27,0:27:76.56:0,77,3159	0/0:14,0:14:25.59:0,26,1522	0/0:36,0:34:39.13:0,39,1909	0/0:13,0:13:25.34:0,25,1629	0/0:13,0:13:32.88:0,33,1599	0/0:39,0:39:77.33:0,77,3944	0/0:19,0:19:48.12:0,48,2411	0/1:15,0:15:21.60:22,0,740	0/0:21,0:20:49.05:0,49,2909	1/1:7,0:6:9.03:255,9,0
chr10	98746835	.	CACACACACACACACACAA	C	1407.18	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=0.772;DP=595;FS=0.749;HRun=0;HaplotypeScore=205.3957;InbreedingCoeff=0.6783;MQ=52.65;MQ0=21;MQRankSum=-2.538;QD=12.56;ReadPosRankSum=-0.955;VQSLOD=2.6289;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:26:2.99:45,3,0	0/0:8,0:7:16.86:0,17,572	0/1:17,0:2:18.95:19,0,25	0/0:33,0:11:17.69:0,18,245	0/0:22,0:21:42.06:0,42,2048	0/0:18,0:18:42.06:0,42,1962	0/0:33,0:33:69.12:0,69,2721	1/1:16,0:16:31.39:298,31,0	0/0:17,0:17:31.63:0,32,1238	0/0:12,0:12:35.17:0,35,1014	0/0:17,0:17:34.60:0,35,1160	0/0:22,0:21:40.67:0,41,1859	0/0:15,0:15:42.51:0,43,1562	0/0:18,0:18:38.59:0,39,1526	0/0:12,0:12:27.08:0,27,1267	0/0:22,0:22:21.48:0,21,340	0/0:47,0:47:96.72:0,97,4617	1/1:25,0:23:11.84:532,12,0	0/0:27,0:27:75.37:0,75,2253	0/0:14,0:14:25.86:0,26,1210	0/0:41,0:39:54.06:0,54,1429	0/0:13,0:13:25:0,25,1212	0/0:13,0:13:32.93:0,33,1180	0/0:40,0:40:77.17:0,77,2889	0/0:19,0:19:45.08:0,45,1701	0/1:15,0:15:99:209,0,376	0/0:20,0:19:46.02:0,46,2139	1/1:1,11:11:9.03:459,9,0
chr10	98746843	.	CACACACACAA	C	1198.58	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=1.796;DP=598;FS=3.263;HRun=0;HaplotypeScore=148.6026;InbreedingCoeff=0.7108;MQ=59.49;MQ0=18;MQRankSum=-5.503;QD=9.36;ReadPosRankSum=0.955;VQSLOD=2.5089;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:25:2.93:18,3,0	0/0:8,0:7:19.55:0,20,229	0/1:20,0:7:13.69:14,0,112	0/0:33,0:14:32.19:0,32,359	0/0:24,0:23:48.05:0,48,939	0/0:17,0:17:36.03:0,36,850	0/0:35,0:35:75.01:0,75,1271	1/1:13,0:13:35.11:294,35,0	0/0:20,0:20:39.92:0,40,563	0/0:13,0:13:32.86:0,33,408	0/0:18,0:18:43.21:0,43,679	0/0:22,0:21:34.31:0,34,754	0/0:18,0:18:48.49:0,48,824	0/0:18,0:18:40.81:0,41,716	0/0:12,0:12:23.80:0,24,550	1/1:5,15:20:8.81:291,9,0	0/0:46,0:46:99:0,103,2265	1/1:25,0:23:12.03:308,12,0	0/0:28,0:28:77.64:0,78,795	0/0:15,0:15:28.59:0,29,609	0/0:42,0:40:65.94:0,66,695	0/0:14,0:14:17.07:0,17,433	0/0:14,0:14:29.86:0,30,454	0/0:37,0:37:74.66:0,75,1354	0/0:18,0:18:42.04:0,42,747	0/1:12,0:12:99:206,0,157	0/0:18,0:17:42.92:0,43,878	1/1:12,0:11:9.03:233,9,0
chr10	98748083	.	GA	G	581.13	PASS	AB=0.833;AC=11;AF=0.196;AN=56;BaseQRankSum=6.902;DP=715;FS=0.000;HRun=13;HaplotypeScore=82.2863;InbreedingCoeff=0.1773;MQ=73.85;MQ0=1;MQRankSum=-0.428;QD=3.34;ReadPosRankSum=0.429;VQSLOD=0.3742;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,1:62:60.04:0,60,1082	0/0:9,0:10:20.87:0,21,189	0/0:26,1:22:6.36:0,6,163	0/0:13,1:13:4.16:0,4,108	0/0:13,1:16:29.70:0,30,318	0/1:16,2:18:9.56:10,0,222	0/0:28,3:33:46.73:0,47,558	1/1:11,19:30:5.23:296,5,0	0/0:25,2:27:41.16:0,41,547	0/0:22,0:24:34.41:0,34,325	0/1:7,1:9:9.89:10,0,75	0/0:42,1:45:67.36:0,67,772	0/1:26,2:29:7.23:7,0,396	0/0:26,3:31:7:0,7,356	0/0:19,0:19:20.16:0,20,338	0/0:5,1:19:12.51:0,13,149	0/0:43,1:44:68.62:0,69,799	0/0:26,1:29:30.12:0,30,457	0/0:21,0:22:50.90:0,51,474	0/0:16,1:17:13.51:0,14,277	0/0:32,3:36:22.07:0,22,502	0/1:13,2:15:16.78:17,0,177	0/1:11,3:14:16.77:17,0,177	0/0:36,5:42:37.05:0,37,634	0/1:17,3:21:20.87:21,0,270	1/1:14,9:23:29.75:219,30,0	0/0:21,2:23:1.23:0,1,324	0/1:6,8:15:3.30:133,0,3
chr10	98748297	.	T	TACAC	790.19	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.474;DP=718;FS=0.000;HRun=0;HaplotypeScore=129.4918;InbreedingCoeff=0.9860;MQ=63.03;MQ0=1;MQRankSum=0.030;QD=39.51;ReadPosRankSum=0.376;VQSLOD=3.6007;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:76.25:0,76,1391	0/0:9,0:9:20.80:0,21,309	0/0:27,0:12:20.56:0,21,302	0/0:22,0:18:33.07:0,33,482	0/0:15,0:17:40.93:0,41,595	0/0:17,0:17:36.11:0,36,570	0/0:36,0:37:77.99:0,78,1220	0/0:35,0:35:58.79:0,59,924	0/0:26,0:27:54.15:0,54,846	0/0:26,0:26:63.21:0,63,1041	0/0:17,0:17:36.12:0,36,597	0/0:32,0:32:81.26:0,81,1307	0/0:26,0:26:54.18:0,54,865	0/0:26,0:28:60.18:0,60,933	0/0:25,0:26:57.18:0,57,920	1/1:5,14:20:36.12:885,36,0	0/0:42,0:43:99:0,99,1608	0/0:34,0:36:68.56:0,69,1236	0/0:20,0:20:30.08:0,30,466	0/0:13,0:13:39.12:0,39,620	0/0:52,0:53:99:0,123,1967	0/0:22,0:24:51.14:0,51,774	0/0:17,0:17:42.14:0,42,689	0/0:28,0:28:57.16:0,57,913	0/0:20,0:19:42.13:0,42,668	0/0:19,0:19:42.14:0,42,691	0/0:29,0:30:53.49:0,53,1003	0/0:8,0:8:21.07:0,21,343
chr10	98748493	.	CA	C	418.14	PASS	AB=0.962;AC=4;AF=0.071;AN=56;BaseQRankSum=4.334;DP=603;FS=8.541;HRun=11;HaplotypeScore=71.7422;InbreedingCoeff=0.4337;MQ=79.66;MQ0=0;MQRankSum=-1.400;QD=7.60;ReadPosRankSum=2.309;VQSLOD=1.8740;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,3:33:31.81:0,32,704	0/1:8,0:8:0.75:1,0,141	0/1:22,2:24:30.81:31,0,76	0/0:21,1:20:3.73:0,4,200	0/0:23,2:25:10.84:0,11,512	0/0:17,0:17:39.09:0,39,410	0/0:20,0:21:53.97:0,54,536	0/0:10,0:27:54.69:0,55,309	0/0:17,0:19:41.18:0,41,449	0/0:17,1:19:11.44:0,11,326	0/0:15,0:15:36.08:0,36,377	0/0:12,1:13:8.44:0,8,295	0/0:15,0:15:33.07:0,33,342	0/0:21,1:23:32.32:0,32,521	0/0:21,2:24:13.68:0,14,528	1/1:2,21:23:59.92:493,60,0	0/0:30,0:32:80.85:0,81,809	0/0:27,1:28:47.54:0,48,711	0/0:20,0:20:23.28:0,23,391	0/0:12,0:12:36:0,36,359	0/0:19,1:20:23.47:0,23,447	0/0:21,1:22:23.47:0,23,447	0/0:19,0:19:42.04:0,42,421	0/0:16,3:19:17.45:0,17,370	0/0:23,2:25:29.48:0,29,511	0/0:11,0:28:63.48:0,63,397	0/0:40,1:41:74.59:0,75,992	0/0:8,0:8:17.81:0,18,130
chr10	98749862	.	T	TG	1187.16	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.145;DP=267;FS=0.000;HRun=1;HaplotypeScore=59.8881;InbreedingCoeff=0.8621;MQ=77.19;MQ0=0;MQRankSum=-2.548;QD=32.98;ReadPosRankSum=-1.932;VQSLOD=2.7957;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39.13:0,39,506	0/0:7,0:7:15.05:0,15,194	0/0:7,0:7:21.05:0,21,258	0/0:11,0:11:30.10:0,30,385	0/0:3,0:3:9.03:0,9,117	0/0:5,0:5:15.05:0,15,194	0/0:16,0:16:45.15:0,45,580	1/1:3,17:20:54.14:784,54,0	0/0:6,0:6:18.06:0,18,233	0/0:11,0:11:30.10:0,30,389	0/0:5,0:5:15.05:0,15,195	0/0:12,0:12:36.12:0,36,467	0/0:5,0:5:15.05:0,15,195	0/0:13,0:13:39.13:0,39,505	0/0:14,0:14:39.13:0,39,506	0/0:6,0:6:18.06:0,18,234	0/0:9,0:9:27.09:0,27,350	0/0:10,0:10:27.09:0,27,350	0/0:13,0:13:36.12:0,36,466	0/0:9,0:9:21.07:0,21,272	0/0:18,0:18:42.14:0,42,544	0/0:10,0:10:30.10:0,30,388	0/0:2,0:2:3.01:0,3,39	0/0:8,0:8:21.03:0,21,273	0/0:13,0:13:39.13:0,39,505	1/1:1,9:10:27.09:404,27,0	0/0:4,0:4:12:0,12,137	1/1:3,3:6:9.03:135,9,0
chr10	98752906	.	CT	C	722.47	PASS	AB=0.928;AC=6;AF=0.107;AN=56;BaseQRankSum=7.459;DP=655;FS=0.000;HRun=10;HaplotypeScore=67.9279;InbreedingCoeff=0.5868;MQ=76.41;MQ0=0;MQRankSum=-1.493;QD=7.77;ReadPosRankSum=3.957;VQSLOD=1.5084;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:34:80.98:703,81,0	0/0:9,0:9:27.06:0,27,284	0/1:25,1:26:6.28:6,0,343	0/0:14,0:14:26.18:0,26,224	0/0:26,2:28:29.03:0,29,744	0/0:14,0:14:39.10:0,39,424	0/0:22,0:22:63.11:0,63,675	0/0:30,0:31:69.01:0,69,735	0/0:20,2:23:4.70:0,5,463	0/0:28,0:29:78.04:0,78,844	0/0:22,1:23:37.12:0,37,637	0/0:27,0:27:71.53:0,72,748	0/0:23,0:23:51.52:0,52,674	0/0:22,0:22:63.15:0,63,680	0/0:35,1:36:70.20:0,70,994	0/0:25,2:27:23.05:0,23,683	0/0:27,1:30:51.62:0,52,718	1/1:0,8:8:15:130,15,0	0/0:20,2:22:5.10:0,5,461	0/0:28,0:28:81.18:0,81,871	0/0:21,0:21:60.11:0,60,627	0/0:20,0:20:54.13:0,54,582	0/0:22,1:23:25.08:0,25,496	0/1:22,3:25:11.97:12,0,554	0/0:18,1:19:25.06:0,25,489	0/0:33,1:34:61.14:0,61,872	0/0:22,0:22:54.14:0,54,590	0/0:13,0:14:38.94:0,39,412
chr10	98753536	.	T	TA	1292.29	PASS	AB=0.944;AC=6;AF=0.107;AN=56;BaseQRankSum=-5.512;DP=576;FS=1.810;HRun=10;HaplotypeScore=58.6507;InbreedingCoeff=0.6353;MQ=76.61;MQ0=0;MQRankSum=-1.414;QD=15.03;ReadPosRankSum=-0.289;VQSLOD=3.7420;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,31:36:72.65:768,73,0	0/1:5,1:8:9.93:10,0,113	0/0:10,0:11:20.51:0,21,147	0/1:13,0:13:17.77:18,0,97	0/0:33,0:33:83.88:0,84,690	0/0:25,0:25:62.87:0,63,507	0/0:11,0:11:26.95:0,27,222	0/0:28,0:28:71.86:0,72,581	0/0:22,0:22:62.90:0,63,514	0/0:17,1:19:18.27:0,18,344	0/0:25,0:25:68.91:0,69,564	0/0:24,0:24:56.90:0,57,468	0/0:12,0:12:29.95:0,30,246	0/0:21,0:21:53.91:0,54,443	0/0:15,0:15:32.92:0,33,271	0/0:17,0:17:44.92:0,45,366	0/0:28,0:28:68.90:0,69,566	1/1:6,23:29:41.46:631,41,0	0/0:17,0:17:44.93:0,45,367	0/0:17,0:17:41.92:0,42,342	0/0:27,0:27:71.91:0,72,591	0/0:16,0:16:38.95:0,39,320	0/0:13,0:13:25.73:0,26,220	0/0:16,0:16:44.95:0,45,370	0/0:23,0:23:59.91:0,60,493	0/0:32,0:32:56.88:0,57,468	0/0:21,1:22:18.92:0,19,362	0/0:16,0:16:29.06:0,29,292
chr10	98753785	.	CT	C	1417.77	PASS	AB=0.908;AC=8;AF=0.143;AN=56;BaseQRankSum=6.105;DP=514;FS=0.000;HRun=10;HaplotypeScore=56.2927;InbreedingCoeff=0.7078;MQ=69.97;MQ0=0;MQRankSum=-0.404;QD=13.76;ReadPosRankSum=-2.170;VQSLOD=2.9553;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.10:0,63,660	0/0:8,0:8:18.05:0,18,199	0/0:14,1:15:3.49:0,3,226	0/1:9,1:10:8.38:8,0,107	0/0:16,0:16:45.04:0,45,460	0/0:24,0:24:39.74:0,40,613	0/0:14,1:15:13.05:0,13,372	1/1:7,33:40:95.93:830,96,0	0/0:17,0:17:51.13:0,51,557	0/0:15,0:15:39.11:0,39,431	0/0:26,0:26:66.11:0,66,698	0/1:16,2:18:0.98:1,0,445	0/0:8,0:8:23.92:0,24,239	0/0:14,0:14:33.09:0,33,365	0/0:21,0:21:54.14:0,54,591	0/0:15,0:15:39.09:0,39,423	0/0:19,0:19:51.14:0,51,564	0/0:27,0:28:74.98:0,75,787	0/0:18,0:18:45.12:0,45,498	0/0:18,0:18:43.62:0,44,424	0/0:19,1:20:31.10:0,31,571	0/0:13,1:14:10.03:0,10,323	0/0:16,0:16:45.11:0,45,488	0/0:15,1:16:19.07:0,19,439	0/0:19,0:19:56.83:0,57,568	1/1:2,15:17:11.80:331,12,0	0/0:26,1:27:46.14:0,46,737	1/1:2,15:17:44.99:390,45,0
chr10	98755312	.	G	GC	535.75	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.614;DP=654;FS=0.846;HRun=8;HaplotypeScore=64.8653;InbreedingCoeff=0.9667;MQ=76.55;MQ0=0;MQRankSum=-2.587;QD=20.61;ReadPosRankSum=0.034;VQSLOD=3.4465;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:46:99:0,107,947	0/0:5,0:5:12.01:0,12,110	0/0:22,0:21:42.01:0,42,384	0/0:15,0:15:31.23:0,31,275	0/0:27,0:27:72.03:0,72,658	0/0:26,1:27:34.40:0,34,569	0/0:23,0:23:62.90:0,63,564	0/0:21,0:21:42.02:0,42,384	0/0:19,0:19:23.40:0,23,379	0/0:21,0:21:53.97:0,54,486	0/0:15,0:15:36.02:0,36,329	0/0:26,0:26:69.02:0,69,627	0/0:24,0:24:60.02:0,60,549	0/0:26,0:26:65.17:0,65,573	0/0:25,0:25:74.98:0,75,677	1/1:6,20:26:32.71:630,33,0	0/0:31,0:31:83.99:0,84,757	0/0:25,0:25:68.93:0,69,619	0/0:15,0:15:36.02:0,36,329	0/0:27,0:27:69.02:0,69,631	0/0:31,0:31:71.99:0,72,655	0/0:31,0:31:87.04:0,87,796	0/0:20,0:20:48.01:0,48,439	0/0:18,0:18:54.03:0,54,494	0/0:23,0:23:57:0,57,515	0/0:27,0:27:74.61:0,75,681	0/0:23,0:22:63.03:0,63,577	0/0:15,0:15:42.02:0,42,384
chr10	98758733	.	G	GTGTA	931.54	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.650;DP=856;FS=1.902;HRun=0;HaplotypeScore=154.9082;InbreedingCoeff=0.9788;MQ=59.75;MQ0=8;MQRankSum=0.513;QD=28.23;ReadPosRankSum=1.221;VQSLOD=3.6495;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:86.88:0,87,1597	0/0:12,0:12:27.09:0,27,498	0/0:39,0:19:15.28:0,15,477	0/0:39,0:21:51.58:0,52,767	0/0:26,0:26:72.18:0,72,1198	0/0:20,0:19:57.16:0,57,987	0/0:34,0:34:90.26:0,90,1585	0/0:36,0:35:98.96:0,99,1524	0/0:36,0:36:99:0,108,1809	0/0:20,0:20:54.18:0,54,963	0/0:10,0:10:21.04:0,21,332	0/0:39,0:39:97.72:0,98,1751	0/0:34,0:34:96.19:0,96,1639	0/0:38,0:38:99:0,114,1916	0/0:34,0:34:99:0,99,1700	1/1:6,25:33:43.31:1026,43,0	0/0:26,0:26:75.10:0,75,1164	0/0:16,0:15:38.87:0,39,602	0/0:31,0:28:45.03:0,45,930	0/0:15,0:15:33.10:0,33,581	0/0:104,0:104:99:0,255,4299	0/0:12,0:13:26.63:0,27,467	0/0:16,0:16:41.99:0,42,704	0/0:44,0:44:99:0,123,2088	0/0:23,0:23:60.17:0,60,1068	0/0:32,0:32:96.12:0,96,1532	0/0:27,0:27:71.98:0,72,1315	0/0:12,0:12:36.04:0,36,530
chr10	98758739	.	ATG	A	1094.14	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.113;DP=883;FS=5.417;HRun=0;HaplotypeScore=123.8652;InbreedingCoeff=0.9374;MQ=56.82;MQ0=9;MQRankSum=3.986;QD=17.37;ReadPosRankSum=1.177;VQSLOD=3.5445;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,37:46:72.22:885,72,0	0/0:12,0:12:21.07:0,21,342	0/0:42,0:17:32.95:0,33,381	0/0:41,0:18:27.18:0,27,296	0/0:29,0:29:60.19:0,60,916	0/0:21,0:20:51.16:0,51,793	0/0:35,0:35:75.24:0,75,1172	0/0:37,0:36:72.20:0,72,1066	0/0:36,2:38:18.35:0,18,1430	0/0:19,0:19:42.61:0,43,686	0/0:10,0:10:24.08:0,24,369	0/0:39,2:41:62.22:0,62,1385	0/0:32,0:32:60.22:0,60,1059	0/0:39,0:39:86:0,86,1363	0/0:36,1:37:58.22:0,58,1414	0/0:30,0:30:43.91:0,44,340	0/0:25,2:27:25.76:0,26,853	1/1:7,10:16:27.08:331,27,0	0/0:32,0:27:14.70:0,15,571	0/0:15,0:14:29.97:0,30,484	0/0:108,0:108:99:0,192,3500	0/0:13,0:13:18.02:0,18,267	0/0:16,0:16:39.13:0,39,627	0/0:49,1:50:83.15:0,83,1811	0/0:25,0:25:60.19:0,60,933	0/0:31,2:33:7.37:0,7,1106	0/0:28,0:28:70.30:0,70,1027	0/0:10,0:10:21.03:0,21,291
chr10	98758965	.	AG	A	1288.97	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.131;DP=610;FS=2.282;HRun=3;HaplotypeScore=79.1221;InbreedingCoeff=0.9956;MQ=78.61;MQ0=0;MQRankSum=-1.754;QD=27.42;ReadPosRankSum=1.793;VQSLOD=3.0565;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:66.09:779,66,0	0/0:6,0:6:18.06:0,18,257	0/0:24,0:24:72.24:0,72,1019	0/0:27,0:25:69.21:0,69,933	0/0:18,0:18:51.17:0,51,734	0/0:13,0:13:39.13:0,39,561	0/0:16,0:16:48.15:0,48,673	0/0:32,0:32:90.25:0,90,1195	0/0:20,0:20:60.20:0,60,862	0/0:26,0:26:78.24:0,78,1075	0/0:12,0:12:33.04:0,33,441	0/0:39,0:39:99:0,111,1572	0/0:17,0:17:51.17:0,51,732	0/0:27,0:27:78.18:0,78,1079	0/0:25,0:25:72.22:0,72,999	0/0:28,0:28:81.18:0,81,1104	0/0:26,0:26:66.22:0,66,950	1/1:0,17:17:51.16:631,51,0	0/0:20,0:20:57.13:0,57,760	0/0:17,0:17:51.17:0,51,734	0/0:30,0:30:84.17:0,84,1180	0/0:19,0:19:51.17:0,51,734	0/0:13,0:13:39.12:0,39,543	0/0:21,0:21:53.98:0,54,702	0/0:14,0:14:42.13:0,42,586	0/0:35,0:35:99:0,102,1467	0/0:22,0:22:57.09:0,57,749	0/0:16,0:16:42.09:0,42,564
chr10	98759751	.	TATACAC	T	315.04	PASS	AB=0.931;AC=10;AF=0.217;AN=46;BaseQRankSum=2.937;DP=144;FS=3.037;HRun=0;HaplotypeScore=41.8355;InbreedingCoeff=0.0109;MQ=47.56;MQ0=3;MQRankSum=-3.607;QD=6.70;ReadPosRankSum=0.316;VQSLOD=1.2200;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:7:5.34:0,5,21	0/1:2,0:2:10.23:10,0,13	./.	./.	0/0:8,0:8:15.05:0,15,298	0/0:4,0:4:3.01:0,3,48	0/0:1,0:1:3.01:0,3,49	0/1:4,10:11:16.30:223,0,16	0/0:1,0:1:3:0,3,29	0/0:6,0:6:16.29:0,16,272	0/0:6,0:6:15.05:0,15,229	0/1:4,0:4:21.67:22,0,136	0/0:1,0:1:2.90:0,3,16	./.	0/1:4,0:4:18.71:19,0,87	1/1:3,1:4:3.01:46,3,0	0/0:22,0:22:12.74:0,13,454	0/1:12,0:12:36.06:58,0,36	0/0:5,0:5:12.04:0,12,189	0/0:2,0:2:6.02:0,6,96	0/1:3,0:3:6.19:6,0,104	./.	0/0:2,0:2:6.02:0,6,96	0/0:1,0:1:3.01:0,3,38	0/0:10,0:10:23.44:0,23,433	1/1:4,0:4:5.97:58,6,0	0/0:12,0:12:30.10:0,30,503	./.
chr10	98759753	.	TACAC	T	436.12	PASS	AB=1.000;AC=14;AF=0.280;AN=50;BaseQRankSum=6.365;DP=152;FS=10.900;HRun=0;HaplotypeScore=39.5891;InbreedingCoeff=0.3098;MQ=55.83;MQ0=3;MQRankSum=-2.426;QD=6.14;ReadPosRankSum=3.383;VQSLOD=-0.5237;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:5.48:24,5,0	0/0:2,0:2:5.93:0,6,55	0/1:3,0:3:6.91:21,0,7	./.	0/0:8,0:8:15.05:0,15,275	0/0:4,0:4:3.01:0,3,48	0/0:2,0:2:6.02:0,6,97	0/1:13,0:10:16.31:223,0,16	1/1:1,0:1:1.25:3,1,0	0/0:7,0:7:15:0,15,257	0/0:6,0:6:15.05:0,15,229	0/0:4,0:4:8.85:0,9,147	0/0:1,0:1:2.90:0,3,16	0/0:3,0:3:6.02:0,6,96	0/0:4,0:4:7.84:0,8,101	1/1:2,2:4:3.01:60,3,0	0/1:22,0:22:21.29:21,0,200	1/1:13,0:13:15.32:135,15,0	0/0:5,0:5:12.04:0,12,189	0/0:2,0:2:6.02:0,6,96	0/1:3,0:3:36.43:36,0,82	./.	0/0:3,0:3:9.03:0,9,141	0/0:1,0:1:3.01:0,3,38	0/0:10,0:10:23.44:0,23,373	1/1:0,4:4:5.97:58,6,0	0/0:13,0:13:33.11:0,33,525	./.
chr10	98760536	.	AACACAC	A	1322.37	PASS	AB=0.658;AC=13;AF=0.250;AN=52;BaseQRankSum=7.578;DP=590;FS=52.159;HRun=0;HaplotypeScore=117.0752;InbreedingCoeff=0.8049;MQ=56.23;MQ0=16;MQRankSum=-4.980;QD=10.02;ReadPosRankSum=-0.242;VQSLOD=0.5689;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,13:29:9.03:144,9,0	0/0:8,0:10:27.09:0,27,731	./.	./.	0/0:18,0:20:20.79:0,21,426	1/1:12,1:19:7.22:71,7,0	0/0:29,0:30:25.71:0,26,780	1/1:17,0:14:5.91:81,6,0	0/0:21,0:20:18.06:0,18,475	0/0:23,0:24:48.15:0,48,1170	0/0:22,0:22:48.16:0,48,1377	0/0:21,0:21:15.05:0,15,417	0/0:10,0:13:18.06:0,18,348	0/0:15,0:18:24.08:0,24,593	0/0:21,0:21:45.15:0,45,1344	1/1:12,1:24:27.02:354,27,0	0/0:23,0:28:36.12:0,36,828	1/1:8,3:13:12.04:206,12,0	0/0:13,0:12:9.03:0,9,174	0/0:17,0:18:17.18:0,17,425	0/0:37,0:35:27.09:0,27,572	0/0:18,0:18:33.11:0,33,826	0/0:23,0:23:36.12:0,36,1056	0/0:32,0:30:36.10:0,36,973	0/0:14,0:15:30.10:0,30,803	0/1:12,13:24:61.55:453,0,62	0/0:19,0:17:30.10:0,30,751	1/1:1,3:4:9.03:184,9,0
chr10	98760644	.	CAG	C	177.28	PASS	AB=0.928;AC=16;AF=0.320;AN=50;BaseQRankSum=3.368;DP=482;FS=0.000;HRun=0;HaplotypeScore=67.7377;InbreedingCoeff=-0.0874;MQ=61.68;MQ0=10;MQRankSum=-0.967;QD=0.80;ReadPosRankSum=-0.395;VQSLOD=1.3378;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:8,0:8:4.73:0,5,38	./.	0/0:29,0:15:2.97:0,3,20	0/1:11,0:11:8.35:8,0,99	0/0:10,0:11:16.22:0,16,126	0/1:18,0:17:37.79:53,0,38	./.	0/0:14,0:14:10.19:0,10,155	0/0:33,0:33:26.78:0,27,249	1/1:14,0:14:2.29:14,2,0	0/1:17,1:18:17.23:17,0,163	0/0:11,0:10:11.98:0,12,139	0/0:19,0:19:18.76:0,19,230	0/1:14,0:16:26.66:27,0,157	0/1:11,0:11:0:0,0,0	0/1:18,0:18:20.47:20,0,105	0/1:7,1:18:2.51:66,0,3	0/1:14,0:13:25.16:25,0,41	0/1:13,0:13:17.05:17,0,104	0/0:19,0:19:14.83:0,15,149	0/1:20,0:20:3.49:9,0,3	0/1:19,0:20:5.02:5,0,77	0/0:20,0:21:22.26:0,22,237	0/0:17,1:18:17.69:0,18,167	0/0:20,0:19:2.77:0,3,44	0/1:8,5:13:20.36:20,0,82	1/1:10,7:16:3:33,3,0
chr10	98760692	.	GA	G	88.82	PASS	AB=0.700;AC=3;AF=0.054;AN=56;BaseQRankSum=5.714;DP=327;FS=1.049;HRun=1;HaplotypeScore=54.4637;InbreedingCoeff=0.4418;MQ=70.75;MQ0=14;MQRankSum=-4.559;QD=3.86;ReadPosRankSum=0.242;VQSLOD=0.2171;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:4,3:5:6.20:6,0,13	0/0:2,0:2:2.99:0,3,23	0/0:35,0:23:49.93:0,50,494	0/0:35,1:17:18.07:0,18,275	0/0:12,0:12:13.64:0,14,397	0/0:13,0:13:35.65:0,36,404	0/0:8,0:8:18.04:0,18,228	0/0:16,0:14:24.10:0,24,367	0/0:9,0:9:5.43:0,5,292	0/0:17,0:17:42.94:0,43,531	0/0:6,0:6:11.96:0,12,136	0/0:11,0:11:25.66:0,26,275	0/0:12,0:11:24.97:0,25,332	0/0:12,0:12:29.82:0,30,363	0/0:11,0:11:22.84:0,23,243	0/0:4,0:4:1.76:0,2,10	0/0:13,0:13:28.01:0,28,316	1/1:13,3:16:11.44:173,11,0	0/0:7,0:6:12.64:0,13,126	0/0:5,0:5:11.89:0,12,131	0/0:8,0:8:21.03:0,21,269	0/0:13,0:13:32.32:0,32,424	0/0:8,0:8:21.03:0,21,243	0/0:10,0:9:11.07:0,11,202	0/0:8,0:8:14.72:0,15,137	0/0:8,0:7:18.05:0,18,235	0/0:10,0:10:22:0,22,260	0/0:9,0:8:18:0,18,183
chr10	98760700	.	GGGT	G	165.39	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.545;DP=324;FS=11.595;HRun=0;HaplotypeScore=59.7175;InbreedingCoeff=0.7779;MQ=75.43;MQ0=8;MQRankSum=-3.707;QD=9.19;ReadPosRankSum=0.367;VQSLOD=1.5150;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,2:7:7.49:50,7,0	0/0:2,0:2:3.48:0,3,51	0/0:40,0:27:59.60:0,60,1054	0/0:39,0:18:17.72:0,18,579	0/0:14,0:14:39.03:0,39,791	0/0:13,0:13:38.13:0,38,704	0/0:7,0:7:21.07:0,21,476	0/0:18,0:18:44.81:0,45,781	0/0:10,0:10:30.06:0,30,588	0/0:16,0:16:38.80:0,39,844	0/0:6,0:6:12.04:0,12,267	0/0:11,0:11:30.05:0,30,495	0/0:7,0:7:21.07:0,21,488	0/0:13,0:13:36.10:0,36,723	0/0:11,0:11:27.04:0,27,466	0/0:7,0:7:20.80:0,21,231	0/0:15,0:15:44.51:0,45,719	1/1:6,4:10:25.81:227,26,0	0/0:4,0:4:9.03:0,9,167	0/0:4,0:4:9.03:0,9,197	0/0:8,0:8:24.05:0,24,466	0/0:12,0:12:27.04:0,27,717	0/0:6,0:6:18.06:0,18,380	0/0:12,0:12:30.08:0,30,523	0/0:5,0:5:9.01:0,9,155	0/0:10,0:9:27.02:0,27,503	0/0:8,0:8:24.06:0,24,494	0/0:8,0:8:18.06:0,18,346
chr10	98760701	.	GGT	G	298.31	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.516;DP=324;FS=13.624;HRun=0;HaplotypeScore=54.0504;InbreedingCoeff=0.8015;MQ=75.91;MQ0=8;MQRankSum=-3.495;QD=16.57;ReadPosRankSum=1.101;VQSLOD=2.1431;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,3:7:11.99:123,12,0	0/0:2,0:2:3.01:0,3,40	0/0:41,0:28:69.18:0,69,853	0/0:39,0:18:35.81:0,36,466	0/0:14,0:14:39.02:0,39,621	0/0:11,0:12:35.12:0,35,527	0/0:7,0:7:21.07:0,21,372	0/0:17,0:17:44.50:0,45,615	0/0:10,0:10:30.04:0,30,448	0/0:16,0:16:39:0,39,676	0/0:6,0:6:12.04:0,12,205	0/0:10,0:10:25.92:0,26,335	0/0:8,0:8:24.07:0,24,414	0/0:14,0:14:39.06:0,39,568	0/0:10,0:10:26.98:0,27,347	0/0:8,0:8:19.21:0,19,169	0/0:15,0:15:44.52:0,45,574	1/1:9,1:10:28.73:291,29,0	0/0:4,0:4:8.95:0,9,122	0/0:4,0:4:9.01:0,9,137	0/0:8,0:8:24.04:0,24,367	0/0:12,0:12:35.90:0,36,596	0/0:6,0:6:17.98:0,18,286	0/0:12,0:12:29.89:0,30,390	0/0:5,0:5:9.01:0,9,126	0/0:10,0:9:27.02:0,27,412	0/0:8,0:8:24.01:0,24,377	0/0:8,0:8:18.04:0,18,244
chr10	98760821	.	GAGA	G	2553.73	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.358;DP=688;FS=0.000;HRun=0;HaplotypeScore=98.0566;InbreedingCoeff=0.9906;MQ=84.56;MQ0=0;MQRankSum=-3.105;QD=39.90;ReadPosRankSum=-1.005;VQSLOD=4.1188;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.23:0,87,1891	0/0:16,0:16:42.12:0,42,890	0/0:28,0:28:77.91:0,78,1560	0/0:19,0:19:30.46:0,30,780	0/0:22,0:22:63.22:0,63,1366	0/0:27,0:27:78.17:0,78,1608	0/0:21,0:21:60.21:0,60,1341	1/1:1,26:27:78.26:1239,78,0	0/0:17,0:17:42.14:0,42,937	0/0:43,0:43:99:0,123,2662	0/0:22,0:22:57.17:0,57,1228	0/0:15,0:15:39.12:0,39,829	0/0:24,0:24:72.25:0,72,1606	0/0:29,0:29:81.24:0,81,1707	0/0:32,0:32:96.33:0,96,2145	0/0:25,0:25:75.26:0,75,1670	0/0:23,0:23:66.19:0,66,1387	0/0:27,0:27:78.27:0,78,1681	0/0:22,0:22:60.20:0,60,1264	0/0:26,0:26:69.24:0,69,1541	0/0:33,0:33:96.33:0,96,2105	0/0:17,0:17:51.16:0,51,1064	0/0:27,0:27:78.22:0,78,1654	0/0:21,0:21:60.21:0,60,1340	0/0:28,0:28:81.28:0,81,1806	1/1:4,27:31:17.22:1209,17,0	0/0:28,0:28:72.25:0,72,1605	1/1:0,6:6:15.05:245,15,0
chr10	98761382	.	TGTGTGTGTGAGC	T	976.83	PASS	AB=0.727;AC=3;AF=0.054;AN=56;BaseQRankSum=4.355;DP=1014;FS=5.794;HRun=0;HaplotypeScore=336.2430;InbreedingCoeff=0.6425;MQ=59.95;MQ0=14;MQRankSum=-2.039;QD=18.43;ReadPosRankSum=-2.186;VQSLOD=1.3858;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,9:37:20.66:382,21,0	0/0:18,0:18:51.18:0,51,2607	0/0:32,0:18:36.03:0,36,852	0/0:48,0:25:21.03:0,21,1069	0/0:23,0:23:63.42:0,63,2853	0/0:22,0:22:48.16:0,48,2436	0/0:36,0:35:86.21:0,86,3893	0/0:34,0:32:77.02:0,77,3323	0/0:36,0:36:93.28:0,93,4001	0/0:48,0:48:99:0,129,6074	0/0:26,0:26:72.23:0,72,3458	0/0:36,0:36:93.32:0,93,4834	0/0:38,0:38:99:0,99,4835	0/0:33,0:33:84.27:0,84,4347	0/0:43,0:43:99:0,99,4980	0/0:47,0:46:99:0,112,3663	0/0:44,0:44:99:0,122,6521	0/1:10,6:16:28.60:699,0,29	0/0:36,0:31:83.38:0,83,3712	0/0:38,0:37:99:0,99,5256	0/0:98,0:96:99:0,243,12384	0/0:35,0:35:99:0,102,5556	0/0:25,0:25:69.22:0,69,3664	0/0:48,0:48:99:0,121,6048	0/0:27,0:27:63.17:0,63,3395	0/0:35,0:35:81.28:0,81,4379	0/0:28,0:28:75.24:0,75,4085	0/0:26,0:24:63.22:0,63,2958
chr10	98761394	.	CGT	C	1089.89	PASS	AB=0.990;AC=5;AF=0.089;AN=56;BaseQRankSum=7.819;DP=1046;FS=1.122;HRun=0;HaplotypeScore=158.3571;InbreedingCoeff=0.5034;MQ=56.41;MQ0=19;MQRankSum=0.593;QD=8.13;ReadPosRankSum=0.292;VQSLOD=3.5217;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:36:0.46:1,0,0	0/0:18,0:18:48.15:0,48,761	0/0:39,0:18:18:0,18,192	0/0:56,0:19:31.59:0,32,544	0/0:28,0:28:66.21:0,66,1065	0/0:17,0:17:39.13:0,39,644	0/0:37,1:37:39.36:0,39,1182	0/0:39,0:36:90.30:0,90,1455	0/1:32,1:32:2.99:3,0,1021	0/0:46,1:47:82.69:0,83,1751	0/0:31,0:31:75.20:0,75,1160	0/0:35,0:35:89.21:0,89,1421	0/0:36,1:37:55.42:0,55,1377	0/0:31,0:31:90.31:0,90,1479	0/0:41,3:44:32.69:0,33,1549	1/1:18,28:45:93.30:1156,93,0	0/0:44,0:44:99:0,116,1866	0/1:19,0:19:38.01:38,0,68	0/0:37,0:31:39.29:0,39,1099	0/0:43,0:42:99:0,105,1701	0/0:100,1:99:99:0,187,3779	0/0:41,0:41:99:0,111,1807	0/0:23,0:23:66.19:0,66,1044	0/0:46,1:47:41.74:0,42,1700	0/0:29,0:29:69.22:0,69,1091	0/0:36,0:36:99:0,99,1613	0/0:26,0:26:72.24:0,72,1164	0/0:22,1:21:7.32:0,7,660
chr10	98761408	.	TATGA	T	223.91	PASS	AB=0.900;AC=3;AF=0.054;AN=56;BaseQRankSum=8.542;DP=1054;FS=5.435;HRun=0;HaplotypeScore=203.4130;InbreedingCoeff=0.5936;MQ=55.57;MQ0=24;MQRankSum=-4.579;QD=4.57;ReadPosRankSum=-4.153;VQSLOD=1.4642;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,4:31:9:104,9,0	0/0:19,0:19:54.19:0,54,1468	0/0:39,0:10:27.03:0,27,452	0/0:64,0:20:46.44:0,46,955	0/0:28,0:28:75.71:0,76,1973	0/0:14,0:14:36.17:0,36,981	0/0:38,0:38:95.52:0,96,2322	0/0:44,0:40:99:0,120,2944	0/0:35,0:34:78.60:0,79,2032	0/0:47,0:47:99:0,110,3217	0/0:29,0:29:72.23:0,72,1938	0/0:40,0:40:99:0,113,2971	0/0:37,0:37:99:0,111,2738	0/0:34,0:34:99:0,99,2617	0/0:41,0:41:99:0,114,2884	0/0:46,0:44:88.72:0,89,1372	0/0:44,0:44:99:0,121,3312	0/1:16,2:18:68.47:217,0,68	0/0:34,0:28:66.20:0,66,2073	0/0:43,0:42:99:0,120,3137	0/0:104,0:102:99:0,252,6927	0/0:43,0:43:99:0,126,3219	0/0:24,0:24:72.23:0,72,1891	0/0:46,0:46:99:0,132,3458	0/0:27,0:27:72.25:0,72,2013	0/0:40,0:39:99:0,111,2849	0/0:28,0:28:84.29:0,84,2268	0/0:16,0:16:45.13:0,45,1112
chr10	98761418	.	AGTGT	A	312.65	PASS	AB=0.913;AC=3;AF=0.054;AN=56;BaseQRankSum=8.062;DP=1059;FS=30.885;HRun=0;HaplotypeScore=213.0141;InbreedingCoeff=0.6409;MQ=53.81;MQ0=19;MQRankSum=-5.243;QD=5.58;ReadPosRankSum=-4.227;VQSLOD=0.8074;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,4:35:18.46:180,18,0	0/0:18,0:18:48.16:0,48,1205	0/0:33,0:12:33.03:0,33,556	0/0:60,0:17:35.48:0,35,575	0/0:29,0:29:63.20:0,63,1502	0/0:15,0:15:32.38:0,32,741	0/0:36,0:37:89.22:0,89,2048	0/0:45,0:40:99:0,108,2227	0/0:31,0:30:78.25:0,78,1850	0/0:47,0:46:99:0,126,2868	0/0:27,0:27:60.21:0,60,1533	0/0:45,0:45:99:0,132,3143	0/0:35,0:35:99:0,99,2518	0/0:35,0:35:80:0,80,1835	0/0:42,0:41:99:0,117,2831	0/0:46,0:45:99:0,105,2413	0/0:47,0:47:99:0,122,2820	0/1:19,2:21:99:236,0,125	0/0:31,0:26:66.16:0,66,1378	0/0:41,0:41:99:0,108,2531	0/0:102,0:100:99:0,245,5702	0/0:39,0:39:99:0,114,2554	0/0:26,0:26:74.43:0,74,1639	0/0:47,0:47:99:0,123,2924	0/0:35,0:35:87.23:0,87,2003	0/0:41,0:39:99:0,108,2556	0/0:30,0:30:81.26:0,81,1787	0/0:17,0:17:45.13:0,45,1015
chr10	98761474	.	AGT	A	1717.92	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.759;DP=1027;FS=1.087;HRun=0;HaplotypeScore=195.3038;InbreedingCoeff=0.9983;MQ=57.01;MQ0=13;MQRankSum=-7.098;QD=21.75;ReadPosRankSum=-3.256;VQSLOD=2.9125;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:43.77:0,44,821	0/0:13,0:13:39.07:0,39,543	0/0:37,0:17:26.89:0,27,370	0/0:44,0:19:31.02:0,31,363	0/0:33,0:33:81.25:0,81,1335	0/0:26,0:26:65.43:0,65,1097	0/0:41,0:39:87.26:0,87,1446	1/1:18,19:31:34.04:558,34,0	0/0:41,0:41:99:0,117,1945	0/0:41,0:41:99:0,111,1841	0/0:24,0:24:54.10:0,54,794	0/0:53,0:53:99:0,149,2446	0/0:46,0:46:99:0,126,2081	0/0:34,0:34:85.87:0,86,1378	0/0:41,0:39:99:0,108,1616	0/0:49,0:48:87.78:0,88,1381	0/0:44,0:44:93.71:0,94,1590	0/0:27,0:27:24.07:0,24,664	0/0:26,0:21:51.17:0,51,871	0/0:34,0:34:89.92:0,90,1421	0/0:90,0:87:99:0,212,3413	0/0:29,0:29:81.17:0,81,1216	0/0:26,0:26:74.74:0,75,1251	0/0:52,0:51:99:0,132,2148	0/0:26,0:25:66.20:0,66,1073	1/1:7,25:30:74.99:946,75,0	0/0:28,0:28:81.26:0,81,1369	1/1:1,9:10:27.09:357,27,0
chr10	98761482	.	TGA	T	461.43	PASS	AB=0.966;AC=7;AF=0.125;AN=56;BaseQRankSum=10.697;DP=1051;FS=0.536;HRun=0;HaplotypeScore=199.7638;InbreedingCoeff=0.7873;MQ=55.11;MQ0=25;MQRankSum=-6.325;QD=4.31;ReadPosRankSum=-2.709;VQSLOD=2.4982;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,1:44:49.45:0,49,939	0/0:13,0:13:32.68:0,33,504	0/0:37,0:10:20.21:0,20,313	0/0:44,0:15:30.88:0,31,398	0/0:30,0:30:78.27:0,78,1420	0/0:25,0:26:55.84:0,56,1230	0/0:42,0:39:96.10:0,96,1601	1/1:33,0:24:5.52:112,6,0	0/0:41,0:41:99:0,120,2126	0/0:42,0:41:99:0,120,2080	0/0:25,0:25:48.14:0,48,843	0/0:53,1:54:99:0,147,2669	0/0:47,0:47:99:0,133,2223	0/0:38,0:38:97.89:0,98,1612	0/0:45,0:42:98.68:0,99,1697	0/0:46,0:45:78.84:0,79,1420	0/0:41,2:43:98.15:0,98,1774	0/1:27,1:28:34.41:34,0,707	0/0:29,0:20:57.16:0,57,984	0/0:33,0:33:90.21:0,90,1527	0/0:96,1:90:99:0,219,3793	0/0:29,0:29:71.90:0,72,1217	0/0:30,0:30:80.72:0,81,1347	0/0:53,1:53:99:0,138,2353	0/0:23,1:23:63.19:0,63,1083	1/1:35,0:30:14.79:280,15,0	0/0:29,0:29:81.26:0,81,1443	1/1:11,0:10:26.38:174,26,0
chr10	98761489	.	ATGTGTGTGAG	A	2203.30	PASS	AB=0.994;AC=9;AF=0.161;AN=56;BaseQRankSum=5.669;DP=1073;FS=14.375;HRun=0;HaplotypeScore=344.5057;InbreedingCoeff=0.3508;MQ=54.07;MQ0=34;MQRankSum=-5.970;QD=9.58;ReadPosRankSum=-1.301;VQSLOD=0.8307;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:46,0:45:99:230,0,427	0/0:12,0:12:18.06:0,18,414	0/1:34,0:8:0.27:0,0,33	0/0:42,0:12:1.72:0,2,36	0/0:31,0:31:63.19:0,63,1474	0/0:27,0:27:67.47:0,67,1827	0/0:42,0:40:60.20:0,60,1290	0/1:33,0:19:22.08:154,0,22	0/0:45,0:45:96.29:0,96,2559	0/0:48,0:44:75.19:0,75,1856	0/0:20,0:19:39.12:0,39,1038	0/0:56,0:56:99:0,105,3086	0/0:48,0:48:96.47:0,96,2830	0/0:39,0:39:95.10:0,95,2803	0/0:48,0:45:92.88:0,93,2515	1/1:38,5:42:54.65:892,55,0	0/0:49,0:49:89.73:0,90,2650	0/1:26,0:26:99:186,0,286	0/0:32,0:22:27.05:0,27,677	0/0:34,0:34:66.63:0,67,1623	0/0:101,0:94:99:0,173,5237	0/0:25,0:24:60.20:0,60,1582	0/0:34,0:34:51.07:0,51,1334	0/0:55,0:54:92.68:0,93,2710	0/0:25,0:24:33.11:0,33,979	0/1:36,0:31:12.50:661,0,13	0/0:30,0:30:66.19:0,66,1378	1/1:11,0:10:17.42:225,17,0
chr10	98761645	.	GAGAGTA	G	206.30	PASS	AB=0.932;AC=6;AF=0.107;AN=56;BaseQRankSum=5.533;DP=1168;FS=11.979;HRun=0;HaplotypeScore=310.2381;InbreedingCoeff=0.2282;MQ=53.43;MQ0=27;MQRankSum=-4.028;QD=1.36;ReadPosRankSum=-4.027;VQSLOD=0.6503;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:38,5:38:30.78:31,0,1662	0/0:18,0:18:45.15:0,45,1485	0/0:33,0:13:29.28:0,29,643	0/0:46,0:16:42:0,42,855	0/0:27,0:27:63.26:0,63,2497	0/0:29,1:30:78.27:0,78,2652	0/0:45,0:45:99:0,126,3851	0/1:46,0:25:8.93:9,0,666	0/0:45,0:45:99:0,126,4394	0/0:67,0:67:99:0,195,6359	0/0:21,0:21:60.04:0,60,2064	0/0:56,0:55:99:0,156,5259	0/0:61,0:61:99:0,184,6316	0/0:42,0:42:99:0,120,4063	0/0:64,0:63:99:0,163,5417	0/0:43,0:41:44.60:0,45,908	0/0:34,0:34:84.29:0,84,2941	0/1:16,3:16:32.78:33,0,822	0/0:30,0:22:63.69:0,64,2098	0/0:33,0:33:92.89:0,93,3304	0/0:121,0:119:99:0,289,9867	0/0:38,0:38:99:0,111,3879	0/0:38,0:38:99:0,102,3798	0/0:66,0:66:99:0,179,6119	0/0:34,0:33:84.17:0,84,2796	0/1:30,1:19:99:103,0,627	0/0:24,0:24:66.21:0,66,2013	1/1:2,11:11:9.03:153,9,0
chr10	98761651	.	A	ATG	759.15	PASS	AB=0.853;AC=5;AF=0.089;AN=56;BaseQRankSum=0.274;DP=1176;FS=0.000;HRun=0;HaplotypeScore=222.1144;InbreedingCoeff=-0.0465;MQ=53.62;MQ0=28;MQRankSum=-4.062;QD=4.66;ReadPosRankSum=-5.074;VQSLOD=1.5748;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,3:38:53.96:0,54,679	0/0:17,0:17:34.48:0,34,389	0/0:34,0:17:35.98:0,36,400	0/0:42,0:16:29.63:0,30,335	0/0:27,0:27:48.19:0,48,756	0/0:30,0:30:63.20:0,63,810	0/0:41,0:41:90.26:0,90,1128	0/1:52,5:37:99:215,0,228	0/0:46,0:46:99:0,117,1376	0/0:62,0:62:99:0,139,1905	0/0:20,0:20:54.17:0,54,684	0/0:55,0:54:99:0,147,1862	0/0:62,0:62:99:0,162,2034	0/0:42,0:42:97.17:0,97,1204	0/0:65,0:64:99:0,129,1618	0/1:30,11:39:63.13:231,0,63	0/0:30,1:31:24.65:0,25,841	0/1:17,1:15:16.80:17,0,318	0/0:33,0:25:60.13:0,60,736	0/0:37,0:36:69.28:0,69,1103	0/0:122,1:121:99:0,256,3214	0/0:41,0:41:95.02:0,95,1221	0/0:38,0:38:99:0,105,1294	0/0:69,1:71:99:0,160,1928	0/0:32,0:31:72.19:0,72,883	0/1:20,12:21:99:404,0,181	0/0:21,0:21:51.14:0,51,627	0/1:13,2:12:1.23:1,0,7
chr10	98761734	.	AGT	A	1425.90	PASS	AB=0.871;AC=5;AF=0.089;AN=56;BaseQRankSum=7.126;DP=1376;FS=2.537;HRun=0;HaplotypeScore=212.3598;InbreedingCoeff=0.3143;MQ=50.24;MQ0=42;MQRankSum=-1.881;QD=7.71;ReadPosRankSum=0.873;VQSLOD=3.2910;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,35:46:64.42:821,64,0	0/0:22,0:21:34.48:0,34,476	0/0:27,0:3:6.02:0,6,101	0/0:25,0:3:9.03:0,9,143	0/0:36,0:34:60.19:0,60,980	0/0:23,0:23:60.21:0,60,1020	0/0:80,0:76:99:0,115,2080	0/1:80,1:52:99:115,0,775	0/0:57,0:57:99:0,135,2209	0/0:65,0:64:99:0,158,2599	0/0:26,0:25:59.90:0,60,981	0/0:64,0:64:99:0,135,2145	0/0:58,0:57:99:0,135,2231	0/0:55,0:55:99:0,130,2058	0/0:61,0:61:99:0,132,2194	0/1:14,0:14:14.54:15,0,43	0/0:46,0:46:99:0,99,1616	0/1:14,21:29:82.30:598,0,82	0/0:26,0:13:30.06:0,30,472	0/0:35,0:34:79.14:0,79,1133	0/0:159,1:149:99:0,275,4467	0/0:46,0:45:99:0,114,1890	0/0:36,0:35:90.31:0,90,1505	0/0:85,2:86:99:0,205,3343	0/0:41,0:39:81.74:0,82,1156	0/0:64,0:60:99:0,156,2523	0/0:27,0:27:63.19:0,63,1021	0/0:23,0:21:43.82:0,44,717
chr10	98761814	.	A	AGT	2082.71	PASS	AB=0.986;AC=6;AF=0.111;AN=54;BaseQRankSum=-0.397;DP=1354;FS=2.993;HRun=0;HaplotypeScore=206.0794;InbreedingCoeff=0.6387;MQ=52.51;MQ0=39;MQRankSum=1.279;QD=12.55;ReadPosRankSum=-1.573;VQSLOD=3.3568;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,30:58:65.92:1362,66,0	0/0:24,0:22:43.35:0,43,552	./.	0/0:30,0:7:21.07:0,21,273	0/0:34,0:34:75.24:0,75,987	0/0:35,0:35:79.13:0,79,1053	0/0:54,0:53:99:0,121,1543	0/0:69,0:54:99:0,120,1552	0/0:57,0:55:99:0,134,1770	0/0:66,0:65:99:0,167,2128	0/0:28,0:28:35.43:0,35,688	0/0:75,0:74:99:0,199,2603	0/0:57,0:56:99:0,147,1844	0/0:53,0:53:99:0,141,1828	0/0:65,0:64:99:0,160,2129	0/1:8,0:7:13.56:14,0,14	0/0:45,0:45:99:0,108,1323	1/1:6,14:19:51.52:767,52,0	0/0:27,0:20:54.04:0,54,650	0/0:36,0:35:41.53:0,42,890	0/0:162,0:155:99:0,328,4280	0/0:50,0:49:99:0,114,1436	0/0:33,0:32:74.91:0,75,961	0/0:70,0:71:99:0,171,2205	0/0:37,0:35:74.84:0,75,983	0/1:70,2:64:75.31:75,0,1752	0/0:27,0:26:66.17:0,66,855	0/0:29,0:29:60.18:0,60,773
chr10	98761817	.	G	GTT	917.50	PASS	AB=0.800;AC=5;AF=0.093;AN=54;BaseQRankSum=9.249;DP=1363;FS=1.688;HRun=1;HaplotypeScore=213.3975;InbreedingCoeff=0.8264;MQ=52.17;MQ0=37;MQRankSum=0.565;QD=9.66;ReadPosRankSum=-1.000;VQSLOD=-0.1263;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:60,4:59:14.17:658,14,0	0/0:24,0:22:44.68:0,45,683	./.	0/0:34,0:7:21.07:0,21,321	0/0:31,0:31:78.25:0,78,1170	0/0:36,0:36:94.12:0,94,1354	0/0:53,0:52:99:0,127,1878	0/0:73,0:58:99:0,144,2036	0/0:57,0:55:99:0,150,2184	0/0:65,0:64:99:0,181,2659	0/0:30,0:30:64.81:0,65,903	0/0:74,0:72:99:0,208,3099	0/0:57,0:56:99:0,156,2283	0/0:52,0:52:99:0,144,2175	0/0:67,0:66:99:0,169,2544	0/1:6,2:7:3.59:4,0,31	0/0:45,0:45:99:0,103,1663	1/1:23,0:21:38.21:376,38,0	0/0:29,0:20:57.17:0,57,833	0/0:36,0:35:75.58:0,76,1239	0/0:166,0:159:99:0,342,5130	0/0:53,0:52:99:0,123,1788	0/0:32,0:31:77.98:0,78,1136	0/0:70,0:70:99:0,182,2665	0/0:34,0:32:81.24:0,81,1195	0/0:72,1:65:40.35:0,40,2286	0/0:26,0:25:75.19:0,75,1058	0/0:27,0:27:63.19:0,63,937
chr10	98761887	.	ATG	A	2249.52	PASS	AB=0.761;AC=8;AF=0.143;AN=56;BaseQRankSum=9.696;DP=1273;FS=6.592;HRun=0;HaplotypeScore=210.4890;InbreedingCoeff=0.0615;MQ=55.58;MQ0=40;MQRankSum=-2.250;QD=6.96;ReadPosRankSum=-0.120;VQSLOD=2.6892;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:43,33:72:99:763,0,219	0/0:12,0:12:24.08:0,24,405	0/0:40,0:19:4.60:0,5,475	0/0:39,0:21:14.75:0,15,381	0/0:30,1:30:30.59:0,31,964	0/0:28,0:28:63.13:0,63,978	0/0:41,0:41:87.28:0,87,1434	0/1:61,12:48:99:105,0,866	0/0:58,1:59:99:0,138,2109	0/0:57,0:57:99:0,147,2266	0/0:25,0:25:56.86:0,57,957	0/0:55,1:55:99:0,143,2322	0/0:52,0:52:99:0,122,2056	0/0:43,0:43:99:0,102,1631	0/0:61,0:59:99:0,165,2621	1/1:5,2:7:5.91:38,6,0	0/1:32,2:34:20.02:20,0,918	0/1:20,12:31:99:418,0,372	0/0:22,0:12:30.09:0,30,475	0/0:42,0:42:99:0,108,1743	0/0:159,1:158:99:0,292,5228	0/0:36,0:36:84.25:0,84,1363	0/0:28,0:28:74.91:0,75,1167	0/0:64,0:64:99:0,144,2339	0/0:32,0:31:63.09:0,63,952	0/1:39,19:49:99:656,0,376	0/0:21,0:20:57.11:0,57,901	0/1:16,24:37:99:385,0,345
chr10	98762004	.	TGTGTGA	T	192.43	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=5.963;DP=1346;FS=3.069;HRun=0;HaplotypeScore=281.4685;InbreedingCoeff=0.6207;MQ=52.52;MQ0=40;MQRankSum=-4.941;QD=2.67;ReadPosRankSum=-3.502;VQSLOD=1.9974;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,5:39:14.90:164,15,0	0/0:18,0:18:48.16:0,48,1482	0/0:41,0:12:26.74:0,27,569	0/0:35,0:9:24.07:0,24,465	0/0:19,0:19:48.16:0,48,1459	0/0:37,0:37:99:0,99,2997	0/0:62,0:56:99:0,103,3574	0/0:91,0:60:99:0,118,3686	0/0:52,0:52:99:0,123,4209	0/0:60,0:57:99:0,150,4537	0/0:28,0:29:72.19:0,72,1998	0/0:65,0:64:99:0,158,4675	0/0:54,0:53:99:0,138,3915	0/0:56,0:56:99:0,150,4397	0/0:61,0:61:99:0,154,4495	0/0:3,0:3:0.53:0,1,1	0/0:53,0:53:49.14:0,49,3700	0/1:32,0:29:99:130,0,319	0/0:32,0:17:36.10:0,36,1051	0/0:30,0:29:80.94:0,81,2417	0/0:137,0:133:99:0,300,9197	0/0:39,0:39:99:0,102,2928	0/0:43,0:43:99:0,109,3440	0/0:60,0:60:99:0,124,4458	0/0:37,0:36:86.10:0,86,2592	0/0:94,0:89:99:0,249,7020	0/0:26,0:26:69.12:0,69,1844	0/0:38,0:37:87.29:0,87,2873
chr10	98762010	.	AGT	A	148.54	PASS	AB=0.885;AC=3;AF=0.054;AN=56;BaseQRankSum=4.697;DP=1315;FS=0.000;HRun=0;HaplotypeScore=181.7861;InbreedingCoeff=0.6281;MQ=51.95;MQ0=54;MQRankSum=-2.872;QD=2.61;ReadPosRankSum=-2.734;VQSLOD=2.2511;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,6:33:2.63:11,3,0	0/0:16,0:16:48.16:0,48,798	0/0:40,0:10:24.06:0,24,325	0/0:41,0:8:23.81:0,24,263	0/0:19,0:19:48.16:0,48,779	0/0:40,0:40:99:0,111,1854	0/0:59,0:49:90.04:0,90,1682	0/0:84,3:55:41.50:0,42,1672	0/0:52,0:52:99:0,134,2198	0/0:61,0:57:99:0,151,2358	0/0:27,0:27:69.24:0,69,1163	0/0:67,0:66:99:0,170,2751	0/0:53,0:52:99:0,138,2225	0/0:54,0:53:99:0,135,2239	0/0:61,0:62:99:0,150,2415	0/0:0,3:3:0.50:0,0,2	0/0:52,0:52:99:0,118,2161	0/1:20,3:20:2.18:222,0,2	0/0:31,0:15:33.10:0,33,543	0/0:30,0:29:78.27:0,78,1327	0/0:136,0:129:99:0,304,4956	0/0:43,0:43:99:0,108,1706	0/0:39,0:38:99:0,105,1755	0/0:62,0:62:99:0,143,2296	0/0:38,0:37:86.02:0,86,1391	0/0:89,0:84:99:0,205,3315	0/0:25,0:25:66.10:0,66,1019	0/0:31,0:30:84.29:0,84,1437
chr10	98762020	.	AGT	A	102.29	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.401;DP=1259;FS=10.624;HRun=0;HaplotypeScore=180.2610;InbreedingCoeff=0.8030;MQ=52.02;MQ0=70;MQRankSum=-1.339;QD=2.38;ReadPosRankSum=-0.869;VQSLOD=1.4493;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,15:27:6:76,6,0	0/0:16,0:16:42.14:0,42,701	0/0:32,0:8:11.87:0,12,154	0/0:43,0:8:6.02:0,6,101	0/0:19,0:19:48.12:0,48,722	0/0:43,0:43:99:0,117,1915	0/0:61,0:51:99:0,123,2023	0/0:73,1:44:89.18:0,89,1346	0/0:52,0:51:99:0,126,2110	0/0:61,0:54:99:0,132,2184	0/0:28,0:28:72.19:0,72,1149	0/0:63,0:61:99:0,146,2436	0/0:56,0:55:99:0,132,2086	0/0:54,0:53:99:0,150,2443	0/0:55,1:56:99:0,127,2109	0/0:3,0:3:0.50:0,0,2	0/0:49,0:49:99:0,126,2015	1/1:11,5:14:11.98:131,12,0	0/0:34,0:12:36.10:0,36,583	0/0:32,0:31:84.26:0,84,1356	0/0:134,0:125:99:0,298,4812	0/0:44,0:44:99:0,105,1682	0/0:39,0:37:99:0,99,1672	0/0:58,0:58:99:0,141,2271	0/0:40,0:39:90.16:0,90,1381	0/0:67,0:63:99:0,160,2617	0/0:27,0:26:51.14:0,51,786	0/0:31,0:30:81.25:0,81,1332
chr10	98762076	.	AGT	A	193.25	PASS	AB=0.888;AC=5;AF=0.089;AN=56;BaseQRankSum=6.067;DP=1132;FS=7.642;HRun=0;HaplotypeScore=188.0669;InbreedingCoeff=0.0493;MQ=51.11;MQ0=80;MQRankSum=-3.434;QD=1.81;ReadPosRankSum=-1.897;VQSLOD=1.8198;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,13:32:21.36:29,0,21	0/0:16,0:12:27.09:0,27,438	0/0:35,0:2:3.01:0,3,51	0/0:33,0:4:12.03:0,12,175	0/0:36,0:34:78.25:0,78,1290	0/0:35,0:35:81.17:0,81,1234	0/0:57,0:41:99:0,111,1817	0/0:27,0:5:6.01:0,6,64	0/0:47,0:46:99:0,111,1831	0/0:63,0:53:99:0,138,2176	0/0:28,0:26:53.72:0,54,828	0/0:52,0:50:99:0,130,2151	0/0:43,0:43:99:0,114,1909	0/0:47,0:47:99:0,114,1827	0/0:56,0:55:99:0,150,2492	0/1:3,0:3:0.10:0,0,0	0/0:38,0:38:91.52:0,92,1466	0/1:5,7:16:13.54:196,0,14	0/0:32,0:12:33.09:0,33,531	0/0:48,0:44:99:0,105,1619	0/0:136,1:131:99:0,306,5008	0/0:41,0:40:96.23:0,96,1575	0/0:32,0:31:72.23:0,72,1194	0/0:58,0:57:99:0,138,2250	0/0:38,0:35:81.17:0,81,1268	0/1:32,0:25:6.02:6,0,754	0/0:26,0:25:75.24:0,75,1237	0/1:21,0:21:66.20:66,0,489
chr10	98762097	.	GTTAGTGTT	G	256.61	PASS	AB=0.899;AC=3;AF=0.054;AN=56;BaseQRankSum=5.151;DP=1082;FS=1.237;HRun=0;HaplotypeScore=291.5080;InbreedingCoeff=0.2759;MQ=51.49;MQ0=78;MQRankSum=-4.489;QD=3.52;ReadPosRankSum=-0.643;VQSLOD=2.2506;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,5:33:63.16:0,63,646	0/0:16,0:11:30.10:0,30,1115	0/1:34,0:2:0:0,0,0	0/0:29,0:3:6.02:0,6,123	0/0:35,0:33:93.32:0,93,3796	0/0:27,0:27:70.33:0,70,2417	0/0:56,0:46:99:0,138,5682	0/0:27,0:9:19.62:0,20,619	0/0:43,0:42:99:0,114,4366	0/0:58,0:50:99:0,115,5004	0/0:19,0:18:48.14:0,48,1734	0/0:47,0:46:99:0,132,5007	0/0:44,0:44:99:0,126,4769	0/0:38,0:38:99:0,105,3857	0/0:55,0:54:99:0,147,6133	0/0:1,0:1:0:0,0,0	0/0:34,0:34:99:0,102,3596	0/1:13,8:19:99:330,0,662	0/0:30,0:16:48.16:0,48,1920	0/0:43,0:39:99:0,114,4459	0/0:139,0:134:99:0,365,13861	0/0:40,0:39:99:0,101,3807	0/0:29,0:28:75.24:0,75,3101	0/0:57,1:58:99:0,156,6065	0/0:38,0:34:81.25:0,81,2834	0/0:39,0:31:91.19:0,91,3597	0/0:31,0:31:81.28:0,81,3136	0/1:16,0:16:6.43:6,0,1599
chr10	98762123	.	G	GTA	1078.55	PASS	AB=0.855;AC=3;AF=0.054;AN=56;BaseQRankSum=6.573;DP=1187;FS=3.568;HRun=0;HaplotypeScore=203.9456;InbreedingCoeff=0.0751;MQ=50.22;MQ0=81;MQRankSum=-4.048;QD=9.89;ReadPosRankSum=2.722;VQSLOD=3.0410;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:33:5.49:0,5,92	0/0:23,0:17:35.80:0,36,437	0/0:24,0:2:6.02:0,6,79	0/0:31,0:5:14.99:0,15,190	0/0:38,0:35:93.23:0,93,1311	0/0:22,0:21:60.20:0,60,907	0/0:67,0:57:99:0,159,2250	0/0:71,1:44:99:0,101,1423	0/0:47,0:45:99:0,114,1622	0/0:60,0:52:99:0,153,2192	0/0:22,0:19:41.79:0,42,588	0/0:45,0:45:99:0,120,1739	0/0:42,0:41:99:0,114,1641	0/0:38,0:38:99:0,108,1625	0/0:49,0:48:99:0,132,1918	0/0:3,0:3:0:0,0,0	0/0:35,0:34:90.27:0,90,1317	0/1:30,2:28:99:223,0,333	0/0:31,0:17:51.13:0,51,754	0/0:40,0:35:84.12:0,84,1169	0/0:141,0:137:99:0,337,4921	0/0:36,0:35:77.46:0,77,1096	0/0:36,0:34:87.23:0,87,1212	0/0:71,0:68:99:0,147,2198	0/0:34,0:29:60.40:0,60,826	0/1:33,19:43:99:853,0,1010	0/0:37,0:35:99:0,99,1458	0/1:22,3:25:99:102,0,817
chr10	98762204	.	A	AGT	32.78	PASS	AB=1.000;AC=5;AF=0.093;AN=54;BaseQRankSum=4.982;DP=1007;FS=10.678;HRun=0;HaplotypeScore=151.3976;InbreedingCoeff=0.6371;MQ=51.68;MQ0=44;MQRankSum=-0.174;QD=0.73;ReadPosRankSum=-2.417;VQSLOD=1.7210;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,4:19:8.24:97,8,0	0/0:9,0:8:18.06:0,18,250	./.	0/0:34,0:9:24:0,24,272	0/0:35,0:35:86.53:0,87,1111	0/0:27,0:26:63.21:0,63,886	0/0:54,0:49:99:0,129,1774	0/0:49,0:37:96.28:0,96,1307	0/0:39,0:37:67.68:0,68,927	0/0:40,0:38:99:0,99,1217	0/0:19,0:19:25.66:0,26,540	0/0:45,0:44:99:0,101,1317	0/0:43,0:43:99:0,114,1574	0/0:42,0:40:99:0,110,1498	0/0:37,0:36:81.21:0,81,1110	1/1:4,0:4:2.68:11,3,0	0/0:43,0:41:89:0,89,1491	0/1:20,0:18:29.76:30,0,59	0/0:30,0:23:63.21:0,63,880	0/0:28,0:27:71.96:0,72,953	0/0:147,0:137:99:0,328,4487	0/0:35,0:34:66.65:0,67,967	0/0:24,0:23:62.93:0,63,783	0/0:58,0:58:99:0,129,1758	0/0:21,0:19:48.11:0,48,622	0/0:47,0:44:99:0,111,1465	0/0:25,0:24:62.97:0,63,757	0/0:14,0:14:39.10:0,39,521
chr10	98762206	.	TGC	T	92.65	PASS	AB=0.875;AC=5;AF=0.093;AN=54;BaseQRankSum=6.908;DP=993;FS=19.899;HRun=0;HaplotypeScore=147.8312;InbreedingCoeff=0.6343;MQ=51.66;MQ0=41;MQRankSum=-2.741;QD=1.97;ReadPosRankSum=-3.506;VQSLOD=0.4155;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,2:20:8.57:70,9,0	0/0:9,0:9:21:0,21,341	./.	0/0:32,0:9:23.79:0,24,346	0/0:34,0:34:86.72:0,87,1499	0/0:25,1:25:66.17:0,66,1174	0/0:57,1:53:99:0,115,2366	0/0:48,0:36:99:0,99,1717	0/0:40,0:38:86.77:0,87,1359	0/0:37,0:36:59.34:0,59,1545	0/0:19,0:19:10.38:0,10,698	0/0:43,0:42:89.45:0,89,1649	0/0:42,0:42:99:0,114,2052	0/0:43,0:41:99:0,106,1927	0/0:36,0:35:90.25:0,90,1613	1/1:1,3:4:3.01:46,3,0	0/0:41,3:42:64.43:0,64,2045	0/1:18,3:19:57.12:87,0,57	0/0:29,0:23:62.71:0,63,1144	0/0:27,0:26:72.05:0,72,1259	0/0:147,0:138:99:0,348,6115	0/0:32,0:31:72.64:0,73,1296	0/0:23,0:22:62.99:0,63,1009	0/0:58,0:58:99:0,138,2438	0/0:21,0:19:48.11:0,48,759	0/0:43,0:41:99:0,107,1834	0/0:24,0:23:62.17:0,62,873	0/0:13,0:13:39.11:0,39,691
chr10	98762286	.	AGT	A	1013.36	PASS	AB=0.946;AC=7;AF=0.125;AN=56;BaseQRankSum=7.864;DP=998;FS=15.932;HRun=0;HaplotypeScore=145.2086;InbreedingCoeff=0.7437;MQ=54.94;MQ0=35;MQRankSum=-2.327;QD=9.65;ReadPosRankSum=1.008;VQSLOD=2.6494;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,22:34:35.56:452,36,0	0/0:10,0:10:18.06:0,18,302	0/0:15,0:4:6:0,6,55	0/1:33,2:12:45.15:45,0,74	0/0:32,0:29:57.13:0,57,828	0/0:27,0:27:72.14:0,72,1210	0/0:47,0:45:87.27:0,87,1427	0/0:47,0:31:78.21:0,78,1229	0/0:34,0:33:81.26:0,81,1306	0/0:39,0:36:80.21:0,80,1226	0/0:26,0:26:62.39:0,62,1025	0/0:37,0:36:93.06:0,93,1496	0/0:30,0:30:87.21:0,87,1356	0/0:24,0:23:60.18:0,60,938	0/0:33,0:33:72.07:0,72,1174	1/1:8,0:8:3.22:13,3,0	0/0:52,0:52:99:0,121,2095	1/1:10,17:26:22.36:640,22,0	0/0:30,0:18:30.09:0,30,476	0/0:24,0:23:63:0,63,961	0/0:140,1:132:99:0,303,4869	0/0:32,0:31:72.22:0,72,1134	0/0:38,0:35:82.06:0,82,1235	0/0:59,0:57:99:0,126,2075	0/0:34,0:32:86.64:0,87,1388	0/0:31,0:29:75.24:0,75,1210	0/0:29,0:29:78.34:0,78,1299	0/0:21,0:21:26.52:0,27,700
chr10	98762348	.	A	AGT	85.81	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=6.130;DP=852;FS=6.183;HRun=0;HaplotypeScore=142.4759;InbreedingCoeff=0.5707;MQ=54.25;MQ0=28;MQRankSum=-2.171;QD=1.03;ReadPosRankSum=-2.561;VQSLOD=1.7203;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,1:17:0.66:1,1,0	0/0:8,0:8:21.07:0,21,277	0/0:17,0:4:0.46:0,0,1	0/1:31,0:16:5.44:5,0,131	0/0:20,0:19:48.08:0,48,634	0/0:25,0:25:60.14:0,60,795	0/0:37,0:34:81.24:0,81,1051	0/0:49,0:39:96.26:0,96,1178	0/0:26,0:26:56.52:0,57,712	0/0:40,0:35:99:0,105,1275	0/0:12,0:12:32.78:0,33,408	0/0:35,0:34:78.21:0,78,1004	0/0:28,0:28:72.24:0,72,956	0/0:30,0:29:68.99:0,69,893	0/0:30,0:28:69.21:0,69,891	0/1:14,0:14:3.57:4,0,40	0/0:33,2:35:79.30:0,79,1031	1/1:18,0:18:26.66:177,27,0	0/0:17,0:14:29.93:0,30,390	0/0:30,0:29:72.07:0,72,931	0/0:84,1:80:99:0,183,2376	0/0:37,0:35:87.23:0,87,1122	0/0:41,0:40:99:0,108,1384	0/0:48,0:45:81.22:0,81,1053	0/0:30,0:27:67.20:0,67,880	0/0:33,1:33:90.29:0,90,1189	0/0:32,0:30:69.12:0,69,845	0/0:22,0:22:63.13:0,63,779
chr10	98762352	.	TGTGA	T	274.92	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=7.762;DP=843;FS=11.346;HRun=0;HaplotypeScore=163.7409;InbreedingCoeff=0.4193;MQ=53.56;MQ0=31;MQRankSum=-4.937;QD=5.09;ReadPosRankSum=-2.595;VQSLOD=1.6412;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:19:3.77:4,0,163	0/0:8,0:8:20.88:0,21,543	0/0:19,0:6:6.14:0,6,123	0/0:24,0:11:2.54:0,3,133	0/0:21,0:20:47.67:0,48,1234	0/0:26,0:26:66.10:0,66,1442	0/0:35,0:32:83.82:0,84,1952	0/0:46,1:37:99:0,108,2185	0/0:25,0:25:55.33:0,55,1304	0/0:41,0:35:99:0,105,2479	0/0:13,0:13:36.09:0,36,765	0/0:36,0:35:83.81:0,84,1915	0/0:28,0:28:78.24:0,78,1865	0/0:32,0:31:71.74:0,72,1711	0/0:30,0:28:72.22:0,72,1659	1/1:8,6:14:18.18:338,18,0	0/0:35,0:35:30.16:0,30,1943	0/1:18,0:18:36.91:40,0,37	0/0:21,0:14:36.12:0,36,797	0/0:30,0:29:78.13:0,78,1908	0/0:80,0:77:99:0,170,4353	0/0:38,0:36:96.31:0,96,2253	0/0:40,0:39:99:0,108,2645	0/0:46,0:43:87:0,87,2041	0/0:28,0:25:71.70:0,72,1524	0/0:35,0:33:96.33:0,96,2375	0/0:27,0:25:69.19:0,69,1490	0/0:22,0:22:63.06:0,63,1251
chr10	98762370	.	TGTGA	T	274.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.495;DP=788;FS=6.832;HRun=0;HaplotypeScore=144.6525;InbreedingCoeff=0.9413;MQ=53.03;MQ0=26;MQRankSum=-5.104;QD=21.12;ReadPosRankSum=-1.725;VQSLOD=2.8146;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:15:27.05:0,27,639	0/0:12,0:12:32.85:0,33,683	0/0:15,0:8:24.08:0,24,550	0/0:16,0:10:17.30:0,17,188	0/0:24,0:23:50.65:0,51,1203	0/0:24,0:24:63.14:0,63,1325	0/0:35,0:33:80.24:0,80,1694	0/0:45,0:36:97.41:0,97,1698	0/0:25,0:25:49.80:0,50,1368	0/0:42,0:36:99:0,108,2300	0/0:15,0:15:42.06:0,42,852	0/0:36,0:35:78.29:0,78,1754	0/0:25,0:25:72.06:0,72,1618	0/0:28,0:27:67.94:0,68,1558	0/0:30,0:28:81.25:0,81,1900	1/1:8,5:13:24.04:368,24,0	0/0:32,0:32:80.33:0,80,1485	0/0:15,0:15:10.02:0,10,610	0/0:36,0:26:66.14:0,66,1255	0/0:30,0:29:87.13:0,87,1836	0/0:72,0:70:99:0,161,3341	0/0:36,0:35:99:0,102,2418	0/0:35,0:35:93.17:0,93,1990	0/0:37,0:34:72.15:0,72,1482	0/0:17,0:16:45.08:0,45,969	0/0:33,0:33:96.30:0,96,2316	0/0:23,0:21:57.16:0,57,1310	0/0:19,0:19:54.15:0,54,1264
chr10	98762809	.	GTA	G	268.95	PASS	AB=0.929;AC=9;AF=0.161;AN=56;BaseQRankSum=5.603;DP=527;FS=47.380;HRun=0;HaplotypeScore=65.6148;InbreedingCoeff=-0.0168;MQ=55.41;MQ0=12;MQRankSum=0.251;QD=2.49;ReadPosRankSum=-3.150;VQSLOD=-0.6740;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,19:25:16.64:131,0,17	0/1:10,0:10:13.22:13,0,285	0/0:29,0:5:11.51:0,12,64	0/0:24,0:4:9.03:0,9,172	0/0:14,0:14:19.11:0,19,372	0/1:23,0:23:24.25:24,0,425	0/0:23,0:22:47.50:0,48,697	0/0:18,0:12:32.96:0,33,302	0/0:15,0:14:38.52:0,39,518	0/0:25,0:25:51.37:0,51,850	0/0:24,0:23:3.88:0,4,476	0/0:22,0:21:47.99:0,48,725	0/0:17,0:16:20.54:0,21,656	0/0:17,0:17:11.17:0,11,646	0/0:17,0:15:45.09:0,45,671	1/1:5,0:5:3:25,3,0	0/0:19,0:19:32.64:0,33,673	0/1:13,2:15:99:105,0,155	0/0:17,0:14:31.15:0,31,415	0/0:26,0:24:50.36:0,50,900	0/0:28,0:27:21.31:0,21,694	0/0:23,0:22:46.89:0,47,774	0/0:19,0:19:26:0,26,681	0/0:20,0:20:10.71:0,11,491	0/1:11,0:11:17.99:18,0,215	0/1:9,0:8:67.28:72,0,67	0/0:22,0:22:33.03:0,33,625	0/1:4,0:4:16.09:16,0,18
chr10	98763930	.	AAAC	A	107.85	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=6.617;DP=571;FS=30.965;HRun=0;HaplotypeScore=117.4923;InbreedingCoeff=0.3709;MQ=62.20;MQ0=5;MQRankSum=-5.486;QD=1.30;ReadPosRankSum=1.854;VQSLOD=0.4273;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:65.61:0,66,518	0/0:5,0:5:9.02:0,9,139	0/0:32,0:14:10.68:0,11,151	0/0:21,0:9:3.36:0,3,73	0/0:23,0:23:40.35:0,40,581	0/0:19,0:19:42.09:0,42,636	0/0:26,0:26:41.78:0,42,571	0/1:25,0:25:2.81:3,0,94	0/0:17,0:17:39.02:0,39,496	0/0:29,0:29:63.16:0,63,943	0/0:15,0:15:36.03:0,36,578	0/0:23,0:23:45.12:0,45,752	0/0:17,0:17:33.06:0,33,513	0/0:24,0:24:50.96:0,51,793	0/0:15,0:15:42.13:0,42,738	1/1:5,8:13:14.91:188,15,0	0/0:32,0:32:79.01:0,79,1234	0/0:23,0:21:54.30:0,54,386	0/0:25,0:25:40.36:0,40,625	0/1:13,0:13:7.07:7,0,436	0/0:13,0:13:15.04:0,15,244	0/0:23,0:23:57.06:0,57,806	0/0:19,0:19:38.44:0,38,511	0/0:31,0:31:54.15:0,54,949	0/0:14,0:14:32.92:0,33,558	0/1:27,0:27:17.95:18,0,123	0/0:9,0:9:21.03:0,21,341	1/1:5,0:5:0.25:1,0,0
chr10	98763945	.	C	CCA	619.51	PASS	AB=0.966;AC=4;AF=0.071;AN=56;BaseQRankSum=8.274;DP=594;FS=0.658;HRun=0;HaplotypeScore=113.3547;InbreedingCoeff=0.4133;MQ=64.42;MQ0=6;MQRankSum=-6.174;QD=9.83;ReadPosRankSum=-2.935;VQSLOD=3.0243;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:15.36:0,15,832	0/0:3,0:3:9.03:0,9,146	0/0:39,0:22:26.60:0,27,591	0/0:27,0:14:21.46:0,21,479	0/0:19,0:19:54.16:0,54,822	0/0:18,0:18:54.17:0,54,849	0/0:25,0:25:66.20:0,66,1027	0/1:31,0:31:99:177,0,285	0/0:19,0:19:57.18:0,57,900	0/0:37,0:36:99:0,105,1658	0/0:13,0:13:39.13:0,39,630	0/0:22,0:22:63.21:0,63,1019	0/0:14,0:14:42.14:0,42,682	0/0:26,0:26:72.25:0,72,1169	0/0:16,0:16:48.16:0,48,782	0/0:10,0:10:14.84:0,15,131	0/0:32,0:32:92.11:0,92,1437	0/0:24,0:22:55.88:0,56,717	0/0:30,0:30:77.28:0,77,1098	0/0:19,0:19:48.08:0,48,750	0/0:14,0:14:33.11:0,33,537	0/0:26,0:26:75.17:0,75,1178	0/0:16,0:16:42.14:0,42,679	0/0:21,0:21:63.22:0,63,1025	0/0:15,0:15:39.13:0,39,631	0/1:25,2:27:90.12:404,0,90	0/0:11,0:11:33.11:0,33,529	1/1:3,2:5:12.04:148,12,0
chr10	98763947	.	A	AC	865.44	PASS	AB=0.955;AC=6;AF=0.107;AN=56;BaseQRankSum=10.498;DP=591;FS=1.129;HRun=1;HaplotypeScore=97.8833;InbreedingCoeff=0.2838;MQ=64.75;MQ0=5;MQRankSum=-9.670;QD=7.21;ReadPosRankSum=0.149;VQSLOD=0.6608;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:32:79.64:80,0,347	0/0:4,0:4:12.02:0,12,141	0/0:37,0:22:55.41:0,55,568	0/0:24,0:14:11.87:0,12,344	0/0:18,0:18:54.15:0,54,667	0/0:17,0:17:51.16:0,51,657	0/0:25,0:25:72.19:0,72,889	0/1:31,0:31:99:279,0,169	0/0:20,0:20:60.18:0,60,762	0/0:36,0:35:99:0,105,1325	0/0:13,0:13:39.12:0,39,494	0/0:22,0:22:63.20:0,63,815	0/0:17,0:17:42.14:0,42,544	0/0:26,0:26:72.23:0,72,932	0/0:16,0:16:48.16:0,48,622	0/0:11,0:11:17.12:0,17,105	0/0:33,0:33:93.26:0,93,1173	0/1:24,0:22:25.88:26,0,353	0/0:30,0:30:78.22:0,78,968	0/0:20,0:20:39.84:0,40,620	0/0:14,0:14:33.11:0,33,427	0/0:25,0:25:69.22:0,69,891	0/0:16,0:16:45.11:0,45,547	0/0:21,0:21:63.20:0,63,817	0/0:15,0:15:42.12:0,42,530	0/1:21,6:27:5.95:468,0,6	0/0:11,0:11:33.11:0,33,425	1/1:3,2:5:12.04:140,12,0
chr10	98763960	.	C	CAAACAA	6171.21	PASS	AB=0.622;AC=9;AF=0.161;AN=56;BaseQRankSum=0.369;DP=627;FS=0.941;HRun=0;HaplotypeScore=142.0292;InbreedingCoeff=0.9089;MQ=69.95;MQ0=4;MQRankSum=-9.578;QD=46.40;ReadPosRankSum=-0.850;VQSLOD=4.3688;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:33:36.11:1158,36,0	0/0:5,0:5:15.02:0,15,302	0/0:37,0:29:79.08:0,79,1218	0/0:26,0:17:29.75:0,30,726	0/0:19,0:19:54.11:0,54,1007	0/0:16,0:16:48.15:0,48,1011	0/0:30,0:30:87.24:0,87,1632	1/1:13,22:36:74.62:1846,75,0	0/0:19,0:20:60.16:0,60,1255	0/0:30,0:29:87.29:0,87,1963	0/0:13,0:13:36.10:0,36,622	0/0:22,0:22:66.21:0,66,1430	0/0:20,0:20:54.14:0,54,1182	0/0:25,0:25:68.97:0,69,1455	0/0:17,0:17:51.12:0,51,988	0/0:15,0:15:32.90:0,33,613	0/0:34,0:35:99:0,105,2093	0/1:9,13:23:2.09:771,0,2	0/0:32,0:32:90.23:0,90,1698	0/0:20,0:20:48.14:0,48,1075	0/0:19,0:19:45.11:0,45,878	0/0:23,0:24:69.22:0,69,1505	0/0:13,0:13:36.11:0,36,793	0/0:22,0:22:60.18:0,60,1364	0/0:17,0:17:51.18:0,51,1167	1/1:6,16:31:69.07:1988,69,0	0/0:16,0:16:42.11:0,42,754	1/1:2,0:7:12.04:409,12,0
chr10	98764681	.	A	ACTCT	6137.63	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-5.375;DP=579;FS=0.942;HRun=0;HaplotypeScore=97.0432;InbreedingCoeff=0.9824;MQ=92.95;MQ0=0;MQRankSum=-8.122;QD=53.37;ReadPosRankSum=-0.565;VQSLOD=5.5611;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:33:69.24:1766,69,0	0/0:8,0:8:21.06:0,21,352	0/0:26,0:26:64.44:0,64,1102	0/0:30,0:30:77.90:0,78,1323	0/0:10,0:10:24.07:0,24,408	0/0:14,0:14:42.14:0,42,764	0/0:21,0:21:54.18:0,54,954	1/1:18,17:35:51.18:1331,51,0	0/0:28,0:28:69.24:0,69,1254	0/0:9,0:9:27.08:0,27,438	0/0:9,0:9:21.07:0,21,382	0/0:31,0:31:93.30:0,93,1651	0/0:19,0:19:48.16:0,48,857	0/0:23,0:23:69.23:0,69,1221	0/0:29,0:29:87.30:0,87,1560	0/0:26,0:26:75.26:0,75,1364	0/0:35,1:36:23.89:0,24,1721	1/1:2,17:19:51.18:1322,51,0	0/0:17,0:17:36.12:0,36,640	0/0:11,0:11:27.08:0,27,462	0/0:24,0:24:63.20:0,63,1114	0/0:11,0:11:33.09:0,33,543	0/0:11,0:11:23.93:0,24,406	0/0:37,0:37:99:0,102,1844	0/0:14,0:14:33.10:0,33,557	1/1:4,18:25:63.15:1483,63,0	0/0:20,0:20:57.20:0,57,1035	1/1:0,3:3:9.03:235,9,0
chr10	98765430	.	A	AC	304.08	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.881;DP=589;FS=4.456;HRun=6;HaplotypeScore=54.9514;InbreedingCoeff=0.8312;MQ=83.66;MQ0=0;MQRankSum=-1.931;QD=19.00;ReadPosRankSum=2.010;VQSLOD=3.2185;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,1246	0/0:7,0:7:12.03:0,12,122	0/0:17,0:17:45.07:0,45,449	0/0:18,0:18:35.99:0,36,353	0/0:16,0:16:42.04:0,42,412	0/0:14,0:14:39.09:0,39,397	0/0:32,0:32:81.18:0,81,825	0/0:27,0:27:63.10:0,63,629	0/0:14,0:14:33.05:0,33,329	0/0:34,0:34:87.19:0,87,887	0/0:10,0:10:30.02:0,30,289	0/0:20,0:20:51.11:0,51,520	0/0:15,0:15:39.08:0,39,396	0/0:22,0:22:60.13:0,60,611	0/0:25,0:25:60.13:0,60,611	1/1:1,15:16:5.50:384,6,0	0/0:32,0:32:78.14:0,78,786	0/0:22,0:22:66.15:0,66,673	0/0:18,0:18:48.10:0,48,489	0/0:15,0:15:36.08:0,36,366	0/0:39,0:39:99:0,111,1125	0/0:28,0:28:78.17:0,78,795	0/0:10,0:10:21.04:0,21,210	0/0:24,0:24:51.11:0,51,520	0/0:22,0:22:60.09:0,60,596	0/0:23,0:23:54.11:0,54,550	0/0:19,0:19:51.12:0,51,520	0/0:6,0:6:18.04:0,18,184
chr10	98766784	.	T	TTA	119	PASS	AB=1.000;AC=3;AF=0.060;AN=50;BaseQRankSum=-0.221;DP=234;FS=8.682;HRun=0;HaplotypeScore=29.9812;InbreedingCoeff=0.2452;MQ=75.55;MQ0=2;MQRankSum=2.048;QD=3.22;ReadPosRankSum=0.732;VQSLOD=0.0149;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:21.02:0,21,239	0/0:1,0:1:3.01:0,3,39	./.	0/1:31,0:12:8.67:9,0,37	0/0:4,0:4:6.02:0,6,75	0/0:9,0:9:15.05:0,15,192	0/0:4,0:4:9.03:0,9,116	0/0:38,1:39:36.65:0,37,1012	0/0:3,0:3:2.97:0,3,20	1/1:2,4:6:11.53:202,12,0	./.	0/0:5,0:5:12.04:0,12,154	0/0:3,0:3:9.03:0,9,116	0/0:3,0:3:6.02:0,6,77	0/0:4,0:4:6.02:0,6,77	0/0:5,0:5:9.03:0,9,116	0/0:25,0:25:69.17:0,69,841	0/0:22,0:22:42.52:0,43,490	0/0:6,0:6:18.06:0,18,231	0/0:5,0:5:9.03:0,9,116	0/0:3,0:3:3:0,3,25	./.	0/0:2,0:2:3.01:0,3,39	0/0:4,0:4:6.02:0,6,77	0/0:3,0:3:9.03:0,9,114	0/0:5,0:5:15.04:0,15,178	0/0:10,0:10:27.09:0,27,347	0/0:6,0:6:15.05:0,15,193
chr10	98766845	.	A	AATAAATAAAT	2410.65	PASS	AB=0.977;AC=12;AF=0.286;AN=42;BaseQRankSum=-4.365;DP=177;FS=8.235;HRun=0;HaplotypeScore=45.1626;InbreedingCoeff=0.4678;MQ=73.29;MQ0=2;MQRankSum=-4.992;QD=22.53;ReadPosRankSum=-3.910;VQSLOD=-0.3716;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:7:6.02:269,6,0	./.	0/1:8,0:4:5.87:6,0,22	0/1:20,0:8:0.03:0,0,0	0/0:1,0:1:3.01:0,3,92	0/0:3,0:3:6.02:0,6,179	./.	1/1:27,0:25:36.11:633,36,0	0/0:1,0:1:3.01:0,3,35	0/0:3,0:3:6.02:0,6,185	0/0:1,0:1:3.01:0,3,92	./.	0/0:2,0:2:6.01:0,6,117	0/0:2,0:2:6.02:0,6,140	0/0:1,0:1:3.01:0,3,45	1/1:2,3:5:3.01:152,3,0	0/0:37,0:37:96.30:0,96,2649	1/1:6,14:27:18.06:878,18,0	0/0:2,0:2:3.01:0,3,92	0/0:2,0:2:3.01:0,3,45	0/0:1,0:1:3.01:0,3,92	./.	./.	./.	0/0:5,0:5:12.04:0,12,369	./.	0/0:5,0:5:9.03:0,9,184	1/1:0,7:12:12.04:608,12,0
chr10	98767418	.	C	CG	2101.31	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.641;DP=743;FS=1.707;HRun=3;HaplotypeScore=68.4768;InbreedingCoeff=0.9998;MQ=87.06;MQ0=0;MQRankSum=-5.506;QD=32.83;ReadPosRankSum=1.789;VQSLOD=4.1346;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:96.32:1341,96,0	0/0:15,0:15:45.09:0,45,512	0/0:27,0:27:74.78:0,75,843	0/0:24,0:24:63.21:0,63,753	0/0:25,0:25:72.21:0,72,850	0/0:20,0:20:54.12:0,54,632	0/0:32,0:32:96.25:0,96,1108	0/0:32,0:32:84.24:0,84,989	0/0:19,0:19:51.16:0,51,611	0/0:21,0:21:60.18:0,60,718	0/0:18,0:18:50.82:0,51,587	0/0:42,0:42:99:0,120,1426	0/0:29,0:29:78.20:0,78,906	0/0:26,0:26:72.22:0,72,862	0/0:26,0:26:75.19:0,75,864	0/0:22,0:22:60.18:0,60,720	0/0:36,0:36:96.23:0,96,1112	1/1:1,25:26:63.21:882,63,0	0/0:17,0:17:51.16:0,51,611	0/0:19,0:19:54.16:0,54,648	0/0:47,0:47:99:0,138,1634	0/0:27,0:27:55.29:0,55,851	0/0:24,0:24:69.18:0,69,802	0/0:38,0:38:99:0,114,1326	0/0:22,0:22:57.17:0,57,683	0/0:31,0:31:84.26:0,84,1007	0/0:28,0:28:75.19:0,75,872	0/0:12,0:12:33.07:0,33,382
chr10	98768095	.	A	AC	5352.78	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-14.188;DP=633;FS=5.250;HRun=0;HaplotypeScore=60.6737;InbreedingCoeff=0.9963;MQ=73.28;MQ0=1;MQRankSum=-2.775;QD=41.49;ReadPosRankSum=-0.601;VQSLOD=5.1133;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:42:99:1678,105,0	0/0:10,0:10:30.10:0,30,418	0/0:18,0:17:48.12:0,48,635	0/0:20,0:18:42.46:0,42,516	0/0:22,0:22:60.20:0,60,838	0/0:22,0:22:66.18:0,66,901	0/0:38,0:38:99:0,114,1558	1/1:2,22:24:66.22:1052,66,0	0/0:29,1:30:42.74:0,43,1169	0/0:27,0:27:78.26:0,78,1091	0/0:16,0:16:45.15:0,45,629	0/0:26,0:26:78.25:0,78,1074	0/0:18,0:18:54.17:0,54,740	0/0:22,0:22:66.22:0,66,922	0/0:21,0:21:60.20:0,60,839	1/1:0,14:14:39.13:624,39,0	0/0:39,0:39:99:0,108,1489	1/1:1,18:19:54.18:863,54,0	0/0:17,0:17:51.17:0,51,704	0/0:11,0:11:27.09:0,27,376	0/0:36,0:36:99:0,108,1491	0/0:36,0:36:99:0,105,1467	0/0:14,0:13:42.11:0,42,564	0/0:29,0:29:87.28:0,87,1199	0/0:10,0:10:30.10:0,30,419	1/1:4,17:21:18.23:848,18,0	0/0:22,0:22:66.22:0,66,923	1/1:3,6:9:18.06:288,18,0
chr10	98768423	.	T	TATTC	2674.48	PASS	AB=0.625;AC=9;AF=0.161;AN=56;BaseQRankSum=-0.927;DP=696;FS=12.632;HRun=0;HaplotypeScore=116.4327;InbreedingCoeff=0.8275;MQ=72.07;MQ0=1;MQRankSum=-2.022;QD=19.24;ReadPosRankSum=-3.724;VQSLOD=1.8570;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,24:42:45.15:1069,45,0	0/0:12,0:12:27.09:0,27,426	0/0:19,0:17:6.02:0,6,95	0/0:23,0:22:12.51:0,13,180	0/0:32,0:32:51.16:0,51,769	0/0:25,0:25:39.12:0,39,593	0/0:28,0:28:24.08:0,24,379	1/1:39,0:39:32.18:408,32,0	0/0:22,0:22:36.09:0,36,522	0/0:38,0:38:53.28:0,53,812	0/0:18,0:18:39.12:0,39,592	0/0:18,0:18:24.08:0,24,360	0/0:26,0:26:48.16:0,48,746	0/0:10,0:10:18.06:0,18,280	0/0:24,0:24:63.21:0,63,986	0/0:11,0:27:30.02:0,30,273	0/0:21,0:21:42.13:0,42,631	0/1:8,12:20:40.99:541,0,41	0/0:27,0:26:16.30:0,16,281	0/0:21,0:21:33.10:0,33,495	0/0:32,0:32:63.21:0,63,984	0/0:27,0:27:36.12:0,36,564	0/0:21,0:21:33.11:0,33,517	0/0:25,0:25:48.13:0,48,712	0/0:30,0:30:39.12:0,39,587	1/1:23,0:28:43.66:581,44,0	0/0:31,0:30:66.21:0,66,1012	1/1:7,0:10:15.05:239,15,0
chr10	98769545	.	GA	G	2076.06	PASS	AB=0.950;AC=14;AF=0.250;AN=56;BaseQRankSum=7.741;DP=545;FS=1.820;HRun=11;HaplotypeScore=56.7543;InbreedingCoeff=0.8152;MQ=69.04;MQ0=0;MQRankSum=-0.966;QD=13.84;ReadPosRankSum=0.534;VQSLOD=3.7975;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:65.92:542,66,0	0/0:11,0:11:30.05:0,30,305	0/1:12,0:10:7.06:7,0,84	0/0:6,0:5:9.02:0,9,91	0/0:21,0:21:49.17:0,49,557	0/0:13,0:14:32.23:0,32,377	0/0:14,1:15:8.38:0,8,282	1/1:5,16:21:47.93:394,48,0	0/1:8,1:9:3.60:4,0,165	0/0:32,1:34:59.38:0,59,810	0/0:24,2:26:19.88:0,20,615	0/0:14,0:15:38.92:0,39,392	0/0:20,1:21:30.54:0,31,489	0/0:20,0:21:47.94:0,48,480	0/0:17,0:17:42.06:0,42,420	1/1:3,15:18:32.95:271,33,0	0/0:24,2:27:22.72:0,23,623	1/1:5,12:17:32.93:271,33,0	0/0:17,1:19:11.28:0,11,295	0/0:29,0:30:71.99:0,72,718	0/0:5,0:5:12.03:0,12,128	0/0:21,1:22:20.46:0,20,415	0/0:17,1:20:26.15:0,26,452	0/0:19,0:19:44.14:0,44,454	0/0:21,0:21:54.07:0,54,544	1/1:9,25:34:45.87:580,46,0	0/0:29,1:31:59.22:0,59,790	1/1:3,8:11:23.96:196,24,0
chr10	98771177	.	TAC	T	178.70	PASS	AB=0.968;AC=11;AF=0.196;AN=56;BaseQRankSum=6.949;DP=638;FS=2.636;HRun=0;HaplotypeScore=109.6532;InbreedingCoeff=0.3465;MQ=67.34;MQ0=3;MQRankSum=-1.726;QD=1.08;ReadPosRankSum=0.884;VQSLOD=1.8632;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:29:10.53:11,0,38	0/0:9,0:9:11.22:0,11,247	0/1:31,3:25:56.97:57,0,516	0/0:22,0:20:21.02:0,21,289	0/0:17,0:16:21.07:0,21,316	0/0:11,0:11:24.52:0,25,359	0/0:37,0:37:21.05:0,21,1051	1/1:16,0:13:5:25,5,0	0/0:33,0:33:69.20:0,69,1031	0/0:23,0:23:42.09:0,42,648	0/0:13,0:13:12.04:0,12,189	0/0:22,0:22:44.46:0,44,635	0/0:25,0:25:26.79:0,27,771	0/0:25,0:25:57.17:0,57,907	0/0:34,0:34:75.24:0,75,1183	0/1:24,0:24:20.57:93,0,21	0/0:30,0:30:69.18:0,69,1013	0/0:19,0:19:12.58:0,13,93	0/1:22,2:24:13.99:14,0,577	0/0:15,0:13:9.03:0,9,147	0/0:44,0:43:81.26:0,81,1277	0/0:14,0:14:18.06:0,18,287	0/0:17,0:17:9.03:0,9,142	0/0:47,0:46:93.24:0,93,1393	0/0:15,0:15:21.02:0,21,256	1/1:12,0:12:13.07:75,13,0	0/1:23,0:22:17.97:18,0,674	1/1:3,0:3:7.94:39,8,0
chr10	98771187	.	CACACAT	C	1654.55	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=4.034;DP=682;FS=17.851;HRun=0;HaplotypeScore=154.1474;InbreedingCoeff=0.5095;MQ=57.12;MQ0=4;MQRankSum=-2.177;QD=7.59;ReadPosRankSum=-5.337;VQSLOD=-0.4513;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:32:34.59:45,0,35	0/0:10,0:10:23.80:0,24,461	0/1:30,0:21:3.89:4,0,281	0/0:16,0:14:13.99:0,14,356	0/1:18,0:16:0.03:0,0,270	0/0:14,0:12:19.27:0,19,510	0/0:40,0:40:77.44:0,77,1397	1/1:2,15:14:41.78:421,42,0	0/0:36,0:36:74.29:0,74,1702	0/0:24,0:23:53.76:0,54,1208	0/0:10,0:10:12.03:0,12,257	0/0:29,0:29:39.78:0,40,1028	0/0:30,0:30:29.68:0,30,1423	0/0:28,0:28:34.67:0,35,1558	0/0:39,0:39:78.18:0,78,1870	1/1:24,2:24:48.04:658,48,0	0/0:34,0:34:62.84:0,63,1650	0/1:18,0:18:81.82:82,0,209	0/0:22,0:22:9.46:0,9,857	0/0:14,0:11:9.03:0,9,262	0/1:56,0:53:19.61:20,0,1838	0/0:16,0:16:21.03:0,21,427	0/0:15,0:15:9.50:0,9,235	0/0:48,0:47:39.59:0,40,2500	0/0:13,0:13:15.47:0,15,310	1/1:16,1:15:35.85:449,36,0	0/0:26,0:25:57.15:0,57,1363	1/1:3,0:3:8.98:144,9,0
chr10	98771215	.	CAG	C	290.67	PASS	AB=0.994;AC=17;AF=0.315;AN=54;BaseQRankSum=2.834;DP=632;FS=12.456;HRun=0;HaplotypeScore=109.3410;InbreedingCoeff=-0.2735;MQ=46.46;MQ0=10;MQRankSum=2.037;QD=0.64;ReadPosRankSum=-1.753;VQSLOD=1.1967;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:32:0.47:1,0,0	0/0:8,0:8:5.41:0,5,28	./.	0/0:7,0:4:2.98:0,3,21	0/0:14,2:14:11.76:0,12,99	0/1:18,1:17:12.28:12,0,49	0/0:21,8:29:5.88:0,6,50	0/0:24,0:23:21.89:0,22,121	0/1:35,0:35:11.29:11,0,393	0/1:19,0:18:8.69:9,0,198	0/0:9,0:9:3:0,3,25	0/1:26,0:26:49.62:50,0,51	0/1:27,1:28:30.75:31,0,267	0/1:28,0:28:27.25:27,0,103	0/1:32,0:32:2.42:2,0,207	0/0:18,0:16:2.92:0,3,17	0/1:32,0:32:14.09:14,0,260	1/1:19,0:18:5.30:24,5,0	0/0:18,0:17:21.48:0,21,252	0/0:12,0:8:3:0,3,25	0/1:61,0:57:99:158,0,353	0/0:13,0:12:2.80:0,3,13	0/0:14,0:14:6:0,6,59	0/1:63,0:61:60.30:60,0,760	0/0:9,0:9:2.96:0,3,19	0/1:22,0:20:10.12:10,0,48	0/1:29,0:29:13.78:14,0,194	0/1:4,0:4:4.01:4,0,10
chr10	98771245	.	GAGAGACAGACAGAC	G	998.39	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=8.667;DP=716;FS=1.610;HRun=0;HaplotypeScore=201.5087;InbreedingCoeff=0.3675;MQ=45.10;MQ0=24;MQRankSum=-7.051;QD=7.18;ReadPosRankSum=0.288;VQSLOD=2.8492;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,27:41:5.46:134,5,0	0/0:10,0:10:21.07:0,21,532	0/0:34,0:4:12.04:0,12,377	0/0:39,0:10:14.26:0,14,459	0/0:23,0:17:27.51:0,28,1217	0/0:19,0:17:18.06:0,18,635	0/0:24,0:24:24.40:0,24,838	0/1:31,0:30:99:298,0,190	0/0:34,0:34:66.21:0,66,2540	0/0:21,0:20:57.17:0,57,1803	0/0:8,0:8:12.04:0,12,229	0/0:22,0:22:32.18:0,32,884	0/0:29,0:29:62.23:0,62,1973	0/0:25,0:25:45.14:0,45,1659	0/0:28,0:28:57.20:0,57,2189	0/1:26,0:24:7.50:87,0,8	0/0:28,0:27:62.58:0,63,2030	1/1:7,12:19:5.80:234,6,0	0/0:32,0:31:78.61:0,79,2041	0/0:10,0:7:12.51:0,13,404	0/0:64,0:59:99:0,113,3900	0/0:15,0:13:18.06:0,18,513	0/0:17,0:14:14.99:0,15,675	0/0:63,0:62:99:0,135,5525	0/0:11,0:9:12.51:0,13,504	0/1:18,0:16:81.09:312,0,81	0/0:21,0:21:39.60:0,40,1699	0/1:2,0:2:6.77:68,0,7
chr10	98771249	.	GACAGAC	G	828.72	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.042;DP=667;FS=8.232;HRun=0;HaplotypeScore=124.0515;InbreedingCoeff=0.8055;MQ=45.87;MQ0=24;MQRankSum=-7.307;QD=6.96;ReadPosRankSum=-3.182;VQSLOD=0.8213;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:29:5.96:48,6,0	0/0:10,0:10:17.95:0,18,319	0/0:34,0:4:12.04:0,12,235	0/0:40,0:10:22.18:0,22,320	0/0:19,0:14:27.34:0,27,665	0/0:20,0:18:17.61:0,18,383	0/0:24,0:24:24.08:0,24,492	1/1:8,0:29:45.30:226,45,0	0/0:31,0:31:60.11:0,60,1389	0/0:20,0:19:44.86:0,45,908	0/0:8,0:8:12.04:0,12,168	0/0:21,0:21:1.87:0,2,442	0/0:27,0:27:41.52:0,42,1086	0/0:21,0:21:18.74:0,19,752	0/0:27,0:27:60.18:0,60,1336	1/1:5,21:24:2.54:49,3,0	0/0:28,0:27:56.34:0,56,1108	1/1:13,0:13:6.02:75,6,0	0/0:29,0:28:73.88:0,74,1210	0/0:11,0:9:15.48:0,15,289	0/0:62,0:57:65.68:0,66,2240	0/0:11,0:9:18.06:0,18,321	0/0:14,0:11:15.05:0,15,366	0/0:62,0:62:99:0,128,3194	0/0:10,0:8:12.51:0,13,274	1/1:10,6:15:38.22:533,38,0	0/0:19,0:19:36.12:0,36,889	1/1:0,0:1:3.01:59,3,0
chr10	98771272	.	GGACA	G	767.06	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.980;DP=570;FS=0.000;HRun=0;HaplotypeScore=106.3426;InbreedingCoeff=0.9381;MQ=52.72;MQ0=8;MQRankSum=-4.008;QD=18.71;ReadPosRankSum=-2.233;VQSLOD=2.5689;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:14.99:0,15,138	0/0:14,0:14:41.80:0,42,565	0/0:30,0:9:17.22:0,17,299	0/0:36,0:21:41.32:0,41,530	0/0:18,0:18:38.97:0,39,686	0/0:9,0:9:27:0,27,469	0/0:25,0:25:63.13:0,63,954	1/1:21,0:20:24.61:214,25,0	0/0:24,0:24:66.12:0,66,1271	0/0:18,0:18:51.09:0,51,967	0/0:6,0:6:15.03:0,15,270	0/0:13,0:13:31.61:0,32,667	0/0:19,0:19:54.08:0,54,958	0/0:18,0:18:54.07:0,54,903	0/0:25,0:25:72.14:0,72,1425	0/0:27,0:25:27.51:0,28,311	0/0:19,0:18:47.68:0,48,863	0/0:16,0:16:15.65:0,16,129	0/0:26,0:23:63.10:0,63,928	0/0:16,0:15:33.01:0,33,544	0/0:44,0:43:99:0,114,1843	0/0:12,0:12:29.91:0,30,471	0/0:11,0:11:21.04:0,21,399	0/0:45,0:45:99:0,117,2203	0/0:11,0:11:24.08:0,24,454	1/1:5,13:16:47.63:591,48,0	0/0:17,0:17:45.08:0,45,817	1/1:1,1:2:6.02:97,6,0
chr10	98771531	.	T	TTTCTAGTCTTCACAGAACACAAGGAG	3991.26	PASS	AB=0.675;AC=42;AF=0.955;AN=44;BaseQRankSum=-2.299;DP=55;FS=6.295;HRun=0;HaplotypeScore=41.6639;InbreedingCoeff=-0.1619;MQ=122.69;MQ0=0;MQRankSum=-1.996;QD=73.91;ReadPosRankSum=-1.288;VQSLOD=1.5098;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:6.02:161,6,0	1/1:1,0:1:3.01:73,3,0	0/1:3,0:5:8.79:511,0,9	0/1:3,1:7:5.27:1210,0,5	1/1:2,0:2:6.02:124,6,0	1/1:2,0:2:5.98:62,6,0	1/1:2,0:2:6.02:194,6,0	1/1:5,0:5:15.03:269,15,0	1/1:2,0:2:6.02:115,6,0	1/1:1,0:1:3.01:79,3,0	1/1:1,0:1:3.01:76,3,0	1/1:2,0:2:6.02:175,6,0	./.	1/1:3,0:3:9.03:156,9,0	./.	./.	1/1:3,0:3:8.99:134,9,0	1/1:3,0:3:8.99:147,9,0	./.	1/1:2,0:2:3.01:70,3,0	1/1:2,0:2:6:73,6,0	1/1:1,0:1:2.99:24,3,0	1/1:1,0:1:3.01:49,3,0	1/1:4,0:4:6.02:153,6,0	./.	1/1:2,0:2:6.01:87,6,0	1/1:1,0:1:3.01:46,3,0	./.
chr10	98772381	.	CGT	C	1934.71	PASS	AB=0.840;AC=12;AF=0.214;AN=56;BaseQRankSum=9.376;DP=752;FS=17.741;HRun=0;HaplotypeScore=119.4010;InbreedingCoeff=0.1589;MQ=64.29;MQ0=4;MQRankSum=-1.516;QD=6.24;ReadPosRankSum=0.313;VQSLOD=1.8814;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:28:10.81:0,11,82	0/0:7,0:7:21.07:0,21,336	0/0:27,0:19:31.28:0,31,343	0/0:30,0:23:23.44:0,23,278	0/1:20,2:22:17.55:18,0,637	0/1:25,2:27:11.75:12,0,770	0/0:21,1:21:3.14:0,3,510	1/1:19,24:42:66.04:735,66,0	0/0:36,2:36:9.32:0,9,1100	0/1:34,3:37:17.64:18,0,1106	0/0:24,1:25:18.19:0,18,730	0/0:26,0:26:63.17:0,63,955	0/0:23,0:22:48.15:0,48,735	0/0:19,0:18:21.39:0,21,591	0/0:36,1:36:27.23:0,27,890	0/1:10,0:18:4.51:30,0,5	0/1:28,3:32:44.26:44,0,751	0/0:5,0:14:32.89:0,33,296	0/1:19,3:20:34.55:35,0,446	0/0:23,2:25:18.23:0,18,756	0/1:51,3:52:32.08:32,0,1506	0/0:16,1:16:6.18:0,6,587	0/0:27,0:27:63.20:0,63,982	0/0:26,1:27:60.17:0,60,911	0/0:23,0:23:51.17:0,51,798	1/1:7,25:31:26.24:761,26,0	0/0:26,0:25:48.16:0,48,760	0/1:3,15:20:15.61:411,0,16
chr10	98772428	.	A	ATG	148.27	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.613;DP=928;FS=1.327;HRun=0;HaplotypeScore=150.1260;InbreedingCoeff=0.7920;MQ=48.88;MQ0=56;MQRankSum=-3.088;QD=4.49;ReadPosRankSum=-2.740;VQSLOD=2.2174;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,9:19:1.55:4,2,0	0/0:10,0:10:27.05:0,27,339	0/0:24,1:7:12.04:0,12,158	0/0:43,3:8:12.02:0,12,135	0/0:24,0:23:50.64:0,51,624	0/0:26,0:26:60.18:0,60,778	0/0:41,0:36:44.67:0,45,583	0/0:58,0:36:75.26:0,75,837	0/0:46,1:45:99:0,108,1433	0/0:49,0:47:99:0,119,1537	0/0:30,0:29:78.17:0,78,951	0/0:44,1:40:99:0,102,1326	0/0:28,0:24:57.19:0,57,752	0/0:24,0:22:51.17:0,51,678	0/0:37,0:35:85.41:0,85,1154	0/0:29,0:24:5.94:0,6,73	0/0:35,0:34:72.87:0,73,901	1/1:5,6:7:18.30:238,18,0	0/0:35,0:19:48.03:0,48,575	0/0:23,0:23:47.62:0,48,588	0/0:88,0:81:99:0,169,2178	0/0:25,0:22:51.16:0,51,670	0/0:27,0:26:63.17:0,63,802	0/0:55,0:53:99:0,114,1435	0/0:18,0:18:33.08:0,33,413	0/0:39,0:35:92.98:0,93,1169	0/0:20,0:19:48.14:0,48,619	0/0:9,0:8:14.17:0,14,163
chr10	98772444	.	A	ATG	176.54	PASS	AB=0.986;AC=5;AF=0.096;AN=52;BaseQRankSum=6.133;DP=943;FS=0.000;HRun=0;HaplotypeScore=158.5788;InbreedingCoeff=0.5962;MQ=47.15;MQ0=62;MQRankSum=-5.457;QD=1.46;ReadPosRankSum=-3.872;VQSLOD=0.9886;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,8:21:0.75:0,1,8	0/0:9,0:9:21.07:0,21,273	./.	./.	0/0:20,0:19:39.12:0,39,498	0/0:26,0:26:54.17:0,54,700	0/0:47,0:41:41.85:0,42,545	0/1:72,0:35:96.21:96,0,551	0/0:45,0:43:93.30:0,93,1199	0/0:49,0:45:99:0,114,1455	0/0:34,0:33:81.26:0,81,1050	0/0:49,0:43:99:0,109,1336	0/0:29,0:24:60.19:0,60,779	0/0:30,0:28:60.19:0,60,778	0/0:44,0:42:97.19:0,97,1265	1/1:15,23:30:6:86,6,0	0/0:37,0:36:70.63:0,71,873	1/1:4,5:6:9.33:107,9,0	0/0:37,0:20:45.11:0,45,560	0/0:22,0:22:45.15:0,45,585	0/0:104,0:93:99:0,139,1932	0/0:22,0:19:44.50:0,45,544	0/0:27,0:25:45.13:0,45,561	0/0:63,0:60:99:0,118,1496	0/0:19,0:19:12.13:0,12,367	0/0:37,0:33:62.63:0,63,942	0/0:16,0:15:39.10:0,39,481	0/0:7,0:5:6.02:0,6,78
chr10	98772489	.	TGTGTATGC	T	2346.33	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=-1.153;DP=931;FS=8.927;HRun=0;HaplotypeScore=265.0342;InbreedingCoeff=0.8389;MQ=48.73;MQ0=44;MQRankSum=-9.941;QD=17.13;ReadPosRankSum=-5.278;VQSLOD=0.8402;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:20:6.02:147,6,0	0/0:7,0:7:20.58:0,21,313	0/0:10,0:1:3.01:0,3,35	./.	0/0:29,0:28:49.13:0,49,656	0/0:24,0:24:48.56:0,49,755	0/0:46,0:39:15.60:0,16,70	1/1:30,0:16:44.89:779,45,0	0/0:46,0:44:89.44:0,89,1174	0/0:43,0:37:87.02:0,87,1420	0/0:30,0:30:59.93:0,60,1164	0/0:49,0:46:82.76:0,83,1602	0/0:39,0:36:79.43:0,79,957	0/0:43,0:41:74.93:0,75,834	0/0:50,0:49:99:0,100,1307	1/1:13,22:27:5.68:134,6,0	0/0:43,0:42:59.90:0,60,1263	1/1:15,0:12:2.63:277,3,0	0/0:14,0:10:28.05:0,28,202	0/0:25,0:25:43.64:0,44,673	0/0:117,0:103:99:0,170,1905	0/0:24,0:22:35.12:0,35,533	0/0:30,0:28:63.04:0,63,660	0/0:70,0:66:99:0,139,2214	0/0:22,0:22:46.13:0,46,604	1/1:20,6:22:52.59:1064,53,0	0/0:24,0:24:57.22:0,57,488	1/1:7,1:6:3.62:105,4,0
chr10	98772494	.	A	ATG	1357.67	PASS	AB=0.875;AC=13;AF=0.241;AN=54;BaseQRankSum=2.734;DP=916;FS=1.825;HRun=0;HaplotypeScore=203.7650;InbreedingCoeff=0.6334;MQ=48.67;MQ0=39;MQRankSum=-5.390;QD=7.34;ReadPosRankSum=-5.537;VQSLOD=2.4776;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:8,14:21:5.95:100,6,0	0/0:8,0:8:20.83:0,21,153	0/0:14,0:2:5.95:0,6,54	./.	0/0:28,0:27:50.64:0,51,366	0/1:25,0:25:6.15:6,0,261	0/0:45,0:39:20.81:0,21,148	1/1:15,7:13:32.96:461,33,0	0/0:48,0:46:50.84:0,51,636	0/0:41,0:35:83.89:0,84,526	0/1:30,0:30:8.29:8,0,318	0/0:46,0:43:57.42:0,57,628	0/0:36,0:33:56.88:0,57,534	0/0:41,0:39:62.87:0,63,458	0/0:48,0:48:31.36:0,31,609	1/1:35,2:30:5.94:100,6,0	0/0:45,0:44:91.91:0,92,661	0/1:6,9:12:15.63:183,0,16	0/0:14,0:10:20.16:0,20,135	0/0:26,0:26:52.08:0,52,353	0/0:109,2:99:99:0,130,1050	0/0:20,0:18:29.76:0,30,217	0/0:29,0:28:62.48:0,62,441	0/0:67,0:64:99:0,120,960	0/0:23,0:23:47.51:0,48,327	1/1:15,9:22:36.34:593,36,0	0/0:24,0:24:62.58:0,63,460	1/1:7,2:7:5.99:71,6,0
chr10	98772552	.	GTGTA	G	1442.28	PASS	AB=0.939;AC=5;AF=0.089;AN=56;BaseQRankSum=1.212;DP=1160;FS=26.176;HRun=0;HaplotypeScore=255.3635;InbreedingCoeff=0.4110;MQ=50.58;MQ0=41;MQRankSum=-8.854;QD=12.54;ReadPosRankSum=-1.930;VQSLOD=1.8155;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:46:75.26:0,75,1873	0/0:15,0:15:45.14:0,45,1063	0/0:70,0:15:45.15:0,45,1024	0/0:89,0:20:47.58:0,48,960	0/0:27,0:27:63.03:0,63,1371	0/0:18,0:18:45.15:0,45,1107	0/0:43,0:41:65.98:0,66,1458	1/1:44,0:34:69.76:1087,70,0	0/0:53,0:52:99:0,132,3087	0/0:47,0:46:99:0,114,2667	0/0:24,0:24:66.20:0,66,1490	0/0:54,0:49:99:0,132,3235	0/0:37,0:34:93.29:0,93,2186	0/0:39,0:38:92.11:0,92,2156	0/0:60,0:57:99:0,160,3698	0/1:24,2:23:52.66:86,0,53	0/0:32,0:32:77.77:0,78,1554	0/0:23,0:21:36.12:0,36,836	0/0:21,0:18:48.14:0,48,915	0/0:29,0:29:81.26:0,81,1940	0/0:119,0:116:99:0,261,6310	0/0:29,0:28:78.27:0,78,1976	0/0:26,0:26:72.25:0,72,1650	0/0:72,0:67:99:0,172,4154	0/0:32,0:32:90.19:0,90,2070	0/1:28,4:26:99:276,0,261	0/0:35,0:34:99:0,105,2512	0/1:13,0:11:5.63:116,0,6
chr10	98772556	.	A	ATGTG	2887.18	PASS	AB=0.769;AC=7;AF=0.125;AN=56;BaseQRankSum=0.646;DP=1164;FS=10.045;HRun=0;HaplotypeScore=250.8060;InbreedingCoeff=0.8295;MQ=50.25;MQ0=37;MQRankSum=-11.223;QD=24.47;ReadPosRankSum=-3.923;VQSLOD=1.5515;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:46:73.88:0,74,1376	0/0:16,0:16:48.14:0,48,845	0/0:68,0:15:45.15:0,45,839	0/0:84,0:19:47.36:0,47,778	0/0:26,0:26:68.98:0,69,1104	0/0:18,0:18:48.15:0,48,859	0/0:40,0:38:66:0,66,1105	1/1:16,30:38:96.40:1700,96,0	0/0:55,0:54:99:0,138,2464	0/0:49,0:49:99:0,123,2092	0/0:22,0:22:66.16:0,66,1106	0/0:53,0:48:99:0,138,2478	0/0:38,0:36:99:0,102,1734	0/0:36,0:35:94.53:0,95,1671	0/0:61,0:58:99:0,160,2872	1/1:14,12:23:11.72:235,12,0	0/0:33,0:33:80.77:0,81,1244	0/0:22,0:20:36.09:0,36,625	0/0:22,0:19:57.07:0,57,822	0/0:32,0:32:90.24:0,90,1524	0/0:119,0:117:99:0,266,4851	0/0:30,0:29:81.18:0,81,1495	0/0:26,0:26:75.24:0,75,1360	0/0:73,0:69:99:0,155,3130	0/0:32,0:32:93.07:0,93,1588	0/1:21,9:24:13.71:725,0,14	0/0:37,0:36:99:0,111,1951	1/1:4,9:11:17.60:372,18,0
chr10	98773243	.	G	GTGTTTCTGTACCTTTTGTTTGTT	12585.21	PASS	AB=0.986;AC=12;AF=0.214;AN=56;BaseQRankSum=0.493;DP=674;FS=4.676;HRun=0;HaplotypeScore=348.8137;InbreedingCoeff=0.7650;MQ=58.30;MQ0=12;MQRankSum=-12.150;QD=64.87;ReadPosRankSum=-3.067;VQSLOD=3.0941;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:39:41.66:1604,42,0	0/0:16,0:16:42.10:0,42,1922	0/0:21,0:12:36.11:0,36,1453	0/0:22,0:12:31.92:0,32,914	0/0:30,0:30:78.14:0,78,3937	0/0:20,0:20:50.35:0,50,2513	0/0:29,0:29:81.13:0,81,3597	0/1:43,0:41:99:4773,0,292	0/0:19,0:18:41.28:0,41,2103	0/0:33,0:33:88.78:0,89,4037	0/0:17,0:17:45.15:0,45,2276	0/0:23,0:23:59.86:0,60,2906	0/0:17,0:17:39.13:0,39,1865	0/0:23,0:22:48.15:0,48,2298	0/0:23,0:23:63.20:0,63,2814	1/1:1,12:30:11.26:1135,11,0	0/1:34,0:35:90.48:90,0,3964	1/1:14,0:13:20.86:1198,21,0	0/0:22,0:20:54.12:0,54,1952	0/0:18,0:18:45.10:0,45,1599	0/0:34,0:33:75.20:0,75,3626	0/0:16,0:16:41.94:0,42,1338	0/0:19,0:18:35.94:0,36,1441	0/0:31,0:31:75.12:0,75,3216	0/0:24,0:25:58.99:0,59,3236	1/1:27,0:27:64.53:3119,65,0	0/0:22,0:22:57.11:0,57,2476	1/1:5,0:5:9.03:667,9,0
chr10	98773245	.	G	GTTTCTGTACCTTT	9577.69	PASS	AB=0.817;AC=9;AF=0.161;AN=56;BaseQRankSum=7.287;DP=673;FS=3.256;HRun=0;HaplotypeScore=255.5519;InbreedingCoeff=0.4470;MQ=58.25;MQ0=13;MQRankSum=-11.062;QD=49.88;ReadPosRankSum=-2.024;VQSLOD=4.1196;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,8:40:99:980,0,194	0/0:16,0:16:45.14:0,45,1480	0/0:21,0:12:36.11:0,36,1172	0/0:23,0:12:32.14:0,32,833	0/0:31,0:31:77.77:0,78,3024	0/0:21,0:21:51.15:0,51,1877	0/0:29,0:29:78.27:0,78,2744	0/1:43,0:41:99:3587,0,283	0/0:19,0:18:42.14:0,42,1595	0/0:33,0:33:95.33:0,95,3231	0/0:17,0:17:45.15:0,45,1699	0/0:24,0:24:59.76:0,60,2377	0/0:17,0:17:39.13:0,39,1443	0/0:24,0:23:48.16:0,48,1728	0/0:21,0:21:63.22:0,63,2267	1/1:22,0:22:11.85:564,12,0	0/1:34,0:34:49.96:50,0,3110	0/1:9,2:12:3.38:652,0,3	0/0:21,0:19:54.17:0,54,1630	0/0:17,0:17:45.14:0,45,1630	0/0:33,0:32:75.26:0,75,2780	0/0:17,0:17:45.14:0,45,1347	0/0:19,0:18:35.59:0,36,1264	0/0:31,0:31:78.23:0,78,2569	0/0:25,0:25:59.24:0,59,2324	1/1:4,0:33:71.90:3196,72,0	0/0:22,0:22:60.12:0,60,1874	0/1:2,0:6:2.72:550,0,3
chr10	98777269	.	T	TACAC	2876.07	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.882;DP=863;FS=13.700;HRun=0;HaplotypeScore=237.8971;InbreedingCoeff=0.9620;MQ=63.70;MQ0=13;MQRankSum=-9.304;QD=16.72;ReadPosRankSum=1.439;VQSLOD=2.0086;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:45,0:42:34.42:599,34,0	0/0:14,0:14:29.85:0,30,479	0/0:48,0:35:56.85:0,57,848	0/0:31,0:24:46.77:0,47,648	0/0:34,0:34:84.24:0,84,1274	0/0:14,0:14:26.98:0,27,431	0/0:31,0:31:63.18:0,63,947	1/1:32,0:26:39.08:551,39,0	0/0:29,0:29:57.12:0,57,886	0/0:39,0:37:87.28:0,87,1405	0/0:23,0:22:45.11:0,45,693	0/0:37,0:35:75.11:0,75,1136	0/0:28,0:28:54.16:0,54,819	0/0:31,0:31:33.07:0,33,509	0/0:28,0:26:44.86:0,45,703	1/1:32,0:31:4.28:129,4,0	0/0:36,0:36:90.30:0,90,1444	1/1:14,0:14:11.97:326,12,0	0/0:13,0:11:21.02:0,21,357	0/0:27,0:27:60.19:0,60,944	0/0:56,0:54:99:0,129,2072	0/0:45,0:44:55.24:0,55,1297	0/0:27,0:27:66.20:0,66,1032	0/0:41,0:40:75.14:0,75,1226	0/0:23,0:21:60.20:0,60,969	1/1:31,5:37:70.15:1149,70,0	0/0:32,0:32:57.05:0,57,816	1/1:11,0:12:21.07:301,21,0
chr10	98777319	.	CAGAGAGACAGAG	C	5496.13	PASS	AB=0.978;AC=28;AF=0.500;AN=56;BaseQRankSum=-8.156;DP=961;FS=44.844;HRun=0;HaplotypeScore=402.4610;InbreedingCoeff=-0.2854;MQ=52.12;MQ0=32;MQRankSum=-0.937;QD=6.76;ReadPosRankSum=-9.313;VQSLOD=0.3253;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,12:34:42.21:1025,42,0	0/0:17,0:16:4.90:0,5,802	0/1:28,0:8:0.69:1,0,236	0/1:32,0:8:41.40:41,0,91	0/0:39,0:37:55.14:0,55,2305	0/1:30,0:27:24.68:25,0,1305	0/1:45,0:44:8.46:8,0,2786	1/1:4,20:21:57.09:917,57,0	0/1:52,0:48:72.91:73,0,2321	0/1:31,0:29:99:112,0,1217	0/1:22,0:22:23.98:24,0,1014	0/1:47,0:47:97.25:97,0,2015	0/0:33,0:31:32.56:0,33,1529	0/1:37,0:37:24.60:25,0,1579	0/1:47,0:46:99:208,0,1687	0/1:14,17:27:99:208,0,131	0/0:31,0:30:41.19:0,41,1748	1/1:7,1:8:6.02:207,6,0	0/1:25,0:21:19.48:19,0,952	0/1:35,0:33:28.93:29,0,1608	0/1:87,0:80:97.02:97,0,4425	0/1:36,0:36:10.98:11,0,1864	0/1:29,0:28:38.23:38,0,1400	0/1:54,0:51:99:132,0,2235	0/0:28,0:25:9.01:0,9,1623	1/1:14,12:30:36.56:1856,37,0	0/1:40,0:39:99:130,0,2041	1/1:4,0:5:9.03:213,9,0
chr10	98777327	.	CAGAG	C	3127.90	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=-8.297;DP=993;FS=23.688;HRun=0;HaplotypeScore=299.9813;InbreedingCoeff=-0.4955;MQ=51.27;MQ0=45;MQRankSum=3.574;QD=3.53;ReadPosRankSum=-2.709;VQSLOD=0.6850;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:34:38.94:339,39,0	0/1:16,0:15:63.32:63,0,219	0/0:37,0:8:6.19:0,6,208	0/0:36,0:8:7.35:0,7,89	0/1:36,0:35:15.84:16,0,574	0/1:31,0:28:36.94:37,0,398	0/1:45,0:43:35.78:36,0,879	1/1:23,0:20:45.85:399,46,0	0/1:52,0:48:59.77:60,0,883	0/1:34,0:29:99:288,0,236	0/1:22,0:22:54.82:55,0,299	0/1:50,0:50:99:132,0,677	0/0:35,0:33:2.36:0,2,473	0/1:41,0:41:75.64:76,0,553	0/1:54,0:53:99:205,0,597	0/1:30,0:25:44.13:44,0,106	0/1:27,0:27:43.53:44,0,532	1/1:8,0:8:6.01:61,6,0	0/1:30,0:22:99:126,0,264	0/1:36,0:34:42.44:42,0,421	0/1:86,0:80:99:189,0,1022	0/1:36,0:35:19.56:20,0,517	0/1:31,0:28:67.99:68,0,441	0/1:57,0:53:72.65:73,0,683	0/1:28,0:25:6.47:6,0,473	1/1:23,5:27:41.05:661,41,0	0/1:43,0:42:99:151,0,697	1/1:3,2:4:8.96:101,9,0
chr10	98777531	.	CACACACAT	C	506.76	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=7.664;DP=953;FS=9.076;HRun=0;HaplotypeScore=200.1443;InbreedingCoeff=0.2486;MQ=38.78;MQ0=100;MQRankSum=-3.513;QD=4.69;ReadPosRankSum=-1.963;VQSLOD=1.6401;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,2:28:18.50:0,19,339	0/0:15,0:12:27.09:0,27,847	0/0:27,0:4:12.04:0,12,416	0/0:25,0:5:15.05:0,15,637	0/0:34,0:30:53.25:0,53,1955	0/0:27,0:22:27.09:0,27,938	0/0:32,0:19:39.61:0,40,1275	0/1:19,0:3:14.96:15,0,72	0/0:39,0:35:32.90:0,33,983	0/0:46,0:39:99:0,99,3358	0/0:32,0:28:45.15:0,45,1611	0/0:47,0:38:63.22:0,63,1975	0/0:42,0:32:45.13:0,45,1502	0/0:39,0:34:48.90:0,49,1389	0/0:55,0:44:33.07:0,33,1086	1/1:23,2:18:23.18:375,23,0	0/0:26,0:20:48.07:0,48,1435	0/0:18,0:13:26.77:0,27,331	0/1:22,0:14:13.95:14,0,895	0/0:52,0:47:78.27:0,78,2389	0/0:61,0:42:58.10:0,58,2055	0/0:56,0:37:62.93:0,63,1873	0/0:22,0:19:30.09:0,30,886	0/0:59,0:50:87.25:0,87,2759	0/0:25,0:20:39.13:0,39,1136	0/1:35,0:31:99:168,0,694	0/0:23,0:19:30.27:0,30,1144	0/1:7,0:7:64.30:64,0,75
chr10	98777533	.	CACACAT	C	862	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=6.192;DP=946;FS=10.619;HRun=0;HaplotypeScore=180.1633;InbreedingCoeff=0.2389;MQ=38.85;MQ0=93;MQRankSum=-3.539;QD=8.21;ReadPosRankSum=-0.895;VQSLOD=2.0360;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:28:13.51:0,14,197	0/0:17,0:12:25.88:0,26,637	0/0:24,0:4:12.04:0,12,329	0/0:23,0:5:15.05:0,15,515	0/0:35,0:31:54.64:0,55,1543	0/0:26,0:22:27.09:0,27,734	0/0:31,0:19:39.60:0,40,993	0/1:18,0:2:14.97:15,0,46	0/0:40,0:36:35.18:0,35,750	0/0:45,0:37:99:0,99,2614	0/0:31,0:27:45.15:0,45,1243	0/0:46,0:37:63.17:0,63,1545	0/0:42,0:32:45.12:0,45,1179	0/0:37,0:32:49.22:0,49,1119	0/0:57,0:46:38.66:0,39,898	1/1:17,8:18:23.57:428,24,0	0/0:26,0:20:48.06:0,48,1128	0/0:17,0:12:10.12:0,10,130	0/1:21,0:14:16.21:16,0,686	0/0:52,0:47:78.26:0,78,1803	0/0:61,0:43:57.14:0,57,1585	0/0:57,0:38:62.56:0,63,1436	0/0:24,0:20:30:0,30,682	0/0:60,0:51:90.12:0,90,2217	0/0:25,0:20:37.59:0,38,840	0/1:34,0:30:99:387,0,405	0/0:22,0:19:30.08:0,30,835	0/1:7,0:7:51.81:145,0,52
chr10	98777537	.	CAT	C	240.55	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=8.614;DP=948;FS=2.306;HRun=0;HaplotypeScore=145.9713;InbreedingCoeff=0.4879;MQ=38.89;MQ0=87;MQRankSum=-5.892;QD=1.17;ReadPosRankSum=-2.715;VQSLOD=2.0551;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:44,0:30:2.41:40,2,0	0/0:18,0:12:22.61:0,23,319	0/0:20,0:4:11.97:0,12,168	0/0:19,0:5:15.05:0,15,273	0/0:34,0:31:44.88:0,45,738	0/0:29,0:24:12.42:0,12,313	0/0:31,0:19:29.55:0,30,434	1/1:15,0:2:2.98:21,3,0	0/1:41,0:37:14.75:15,0,268	0/0:44,0:36:84.21:0,84,1155	0/0:34,0:28:37.21:0,37,527	0/0:47,1:39:35.35:0,35,680	0/0:41,0:32:39.03:0,39,531	0/0:36,0:32:42.53:0,43,517	0/0:58,0:48:16.20:0,16,432	1/1:21,5:18:23.88:226,24,0	0/0:26,0:20:45.34:0,45,526	1/1:17,0:12:4.93:32,5,0	0/1:23,0:14:23.15:23,0,308	0/0:53,0:48:43.60:0,44,711	0/0:60,1:44:32.51:0,33,741	0/0:57,0:38:36.74:0,37,621	0/0:25,0:21:20.45:0,20,279	0/0:60,1:52:49.56:0,50,1025	0/0:25,0:19:2.28:0,2,306	0/1:33,0:29:29.27:29,0,38	0/0:23,0:20:10.31:0,10,321	1/1:6,0:6:2.71:6,3,0
chr10	98777539	.	TACACAC	T	1104.45	PASS	AB=0.918;AC=6;AF=0.107;AN=56;BaseQRankSum=3.930;DP=941;FS=28.111;HRun=0;HaplotypeScore=178.6561;InbreedingCoeff=0.2287;MQ=39.02;MQ0=79;MQRankSum=-2.473;QD=8.56;ReadPosRankSum=2.225;VQSLOD=1.0340;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:47,0:31:5.81:6,0,299	0/0:18,0:12:24.08:0,24,550	0/0:19,0:4:12.04:0,12,290	0/0:17,0:5:15.05:0,15,435	0/0:34,0:31:51.65:0,52,1288	0/0:28,0:25:29.93:0,30,667	0/0:31,0:20:39.61:0,40,854	0/0:13,1:2:3.01:0,3,78	0/0:42,0:38:44.15:0,44,797	0/0:42,0:35:96.33:0,96,2456	0/0:32,0:27:45.15:0,45,1126	0/0:47,0:38:66.23:0,66,1472	0/0:39,0:31:42.14:0,42,1059	0/0:36,0:32:46.23:0,46,969	0/0:57,0:48:33.58:0,34,830	1/1:26,0:18:15.59:291,16,0	0/0:27,0:21:42.06:0,42,963	0/1:17,0:13:76.69:77,0,193	0/0:23,0:14:28.84:0,29,592	0/0:53,0:48:77.21:0,77,1597	0/0:62,0:45:55.13:0,55,1260	0/0:57,0:39:54.18:0,54,1305	0/0:24,0:20:27.09:0,27,653	0/0:61,0:53:84.27:0,84,1961	0/0:25,0:19:39.10:0,39,809	0/1:17,16:29:99:624,0,636	0/0:24,0:21:48.17:0,48,973	0/1:6,0:6:89.69:232,0,90
chr10	98777551	.	CAGAG	C	420.44	PASS	AB=0.977;AC=16;AF=0.333;AN=48;BaseQRankSum=4.040;DP=892;FS=11.242;HRun=0;HaplotypeScore=166.0903;InbreedingCoeff=0.4233;MQ=40.27;MQ0=56;MQRankSum=-3.303;QD=1.27;ReadPosRankSum=-1.869;VQSLOD=1.5996;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:45,0:32:0:0,0,0	0/0:15,0:11:5.61:0,6,54	./.	./.	0/0:35,0:33:8.98:0,9,116	0/0:28,0:25:7.38:0,7,117	0/0:31,0:26:14.62:0,15,282	./.	0/0:46,0:42:11.21:0,11,371	0/0:44,0:40:23.08:0,23,304	0/0:31,0:27:5.14:0,5,88	0/0:48,0:40:21.33:0,21,413	0/1:37,0:32:36.07:36,0,103	0/0:38,0:34:5.10:0,5,113	0/0:48,0:44:29.33:0,29,516	0/1:26,0:18:23.64:72,0,24	0/1:24,1:21:29.55:30,0,163	1/1:15,0:13:3.01:34,3,0	1/1:16,4:12:9.01:116,9,0	1/1:45,1:45:9.02:113,9,0	1/1:56,0:40:3:35,3,0	0/0:44,0:34:8.96:0,9,132	0/0:27,0:21:6:0,6,67	0/0:59,0:50:26.83:0,27,523	0/0:23,0:19:0:0,0,0	1/1:30,0:28:5.62:43,6,0	1/1:26,0:23:6.36:90,6,0	./.
chr10	98777669	.	AAC	A	387.41	PASS	AB=0.950;AC=19;AF=0.339;AN=56;BaseQRankSum=2.743;DP=870;FS=17.297;HRun=0;HaplotypeScore=113.7111;InbreedingCoeff=-0.3777;MQ=42.22;MQ0=88;MQRankSum=1.131;QD=0.73;ReadPosRankSum=0.062;VQSLOD=0.6422;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:37:10.24:0,10,75	0/1:8,0:7:0.16:0,0,52	1/1:52,0:2:2.80:13,3,0	0/0:43,1:3:3.01:0,3,41	0/1:21,1:18:9.65:10,0,248	0/1:14,1:13:17.47:17,0,107	0/1:40,0:29:68.81:69,0,458	0/0:24,0:11:5.96:0,6,45	0/1:30,0:30:18.77:19,0,446	0/1:39,3:38:16.06:16,0,594	0/1:26,0:22:37.48:37,0,215	0/1:26,0:24:3.11:3,0,329	0/0:35,0:32:25.73:0,26,638	0/0:26,0:26:36.09:0,36,503	0/1:41,0:38:54.49:54,0,449	0/0:37,0:26:21.97:0,22,147	0/1:20,9:27:43.49:43,0,186	0/1:30,0:21:27.62:28,0,62	0/1:15,0:10:44.97:45,0,122	0/0:20,0:17:13.48:0,13,278	0/1:38,6:37:29.74:30,0,410	0/1:26,2:24:70.61:71,0,228	0/0:20,0:17:20.97:0,21,255	0/1:39,1:32:58.87:59,0,407	0/1:18,1:15:18.59:19,0,157	0/0:45,0:39:42.52:0,43,327	0/1:19,4:20:6.95:7,0,253	0/0:24,0:23:11.94:0,12,90
chr10	98777703	.	CAGAAAG	C	1279.62	PASS	AB=0.981;AC=13;AF=0.250;AN=52;BaseQRankSum=1.356;DP=725;FS=0.000;HRun=0;HaplotypeScore=190.5077;InbreedingCoeff=0.2096;MQ=42.04;MQ0=32;MQRankSum=1.308;QD=4.83;ReadPosRankSum=1.740;VQSLOD=2.6387;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:65,0:54:35.05:442,0,35	0/1:8,0:6:11.79:12,0,33	./.	./.	0/1:26,0:23:7.73:8,0,354	0/0:16,0:12:9.50:0,10,82	0/0:31,0:28:33.81:0,34,370	1/1:7,0:5:8.92:62,9,0	0/0:29,0:28:2.38:0,2,327	0/0:40,0:34:1.72:0,2,670	0/1:17,0:15:30.72:31,0,156	0/0:28,0:25:29.60:0,30,553	0/0:32,0:29:14.66:0,15,728	0/0:22,0:22:38.76:0,39,450	0/0:40,0:38:40.05:0,40,598	1/1:28,0:26:10.89:144,11,0	0/0:17,0:17:27.47:0,27,321	0/1:28,0:19:5.69:322,0,6	0/0:17,0:12:34.71:0,35,310	0/0:26,4:28:31.67:0,32,305	0/0:40,0:34:45.98:0,46,640	0/1:45,0:36:65.49:65,0,375	0/0:27,0:26:34.67:0,35,321	0/0:38,0:33:13.39:0,13,976	0/0:21,0:16:20.81:0,21,133	0/1:28,0:29:55.98:276,0,56	0/0:24,0:22:30.58:0,31,663	1/1:6,0:7:6:72,6,0
chr10	98777705	.	GAA	G	785.14	PASS	AB=0.993;AC=18;AF=0.346;AN=52;BaseQRankSum=2.671;DP=710;FS=4.969;HRun=3;HaplotypeScore=165.5143;InbreedingCoeff=0.2337;MQ=42.23;MQ0=28;MQRankSum=1.127;QD=2.23;ReadPosRankSum=3.049;VQSLOD=0.0268;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:64,0:52:7.24:160,7,0	0/1:8,0:6:10.73:35,0,11	./.	./.	0/1:26,0:23:13.27:13,0,124	0/1:16,0:12:32.24:50,0,32	0/0:30,0:27:33.69:0,34,344	1/1:6,0:4:8.92:62,9,0	0/0:29,0:28:2.99:0,3,199	0/1:41,0:35:34.26:34,0,333	0/1:17,1:16:30.47:30,0,72	0/0:26,0:23:15.38:0,15,273	0/1:30,0:27:17.15:17,0,318	0/0:23,0:23:6.46:0,6,213	0/0:42,0:40:34.83:0,35,488	1/1:31,0:28:9.87:75,10,0	0/0:15,0:15:25.98:0,26,228	1/1:28,0:19:11.63:189,12,0	0/0:18,0:12:33.68:0,34,209	0/0:29,0:27:33.76:0,34,196	0/0:41,0:35:46.08:0,46,343	0/1:45,0:36:37.74:38,0,166	0/0:16,9:24:26.73:0,27,152	0/0:36,0:33:22.36:0,22,552	0/0:19,0:16:17.57:0,18,77	0/1:31,0:29:11.17:210,0,11	0/0:23,0:22:13.64:0,14,341	1/1:7,0:7:5.95:43,6,0
chr10	98777837	.	A	AAG	468.96	PASS	AB=0.946;AC=7;AF=0.125;AN=56;BaseQRankSum=8.304;DP=886;FS=1.562;HRun=0;HaplotypeScore=147.5885;InbreedingCoeff=0.1922;MQ=51.77;MQ0=23;MQRankSum=-6.855;QD=2.52;ReadPosRankSum=0.159;VQSLOD=2.6186;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:61,8:52:63.44:123,0,63	0/0:9,0:9:14.64:0,15,185	0/0:32,0:13:29.41:0,29,280	0/0:27,0:9:8.91:0,9,76	0/0:34,0:34:78.18:0,78,926	0/0:24,0:24:57.10:0,57,690	0/0:39,0:39:84.19:0,84,1012	0/1:9,0:6:0:0,0,0	0/0:35,0:35:85.77:0,86,1036	0/0:43,0:43:84.46:0,84,1276	0/0:25,0:24:63.19:0,63,785	0/0:37,0:36:58.45:0,58,953	0/0:40,0:40:90.06:0,90,1050	0/0:35,0:35:84.14:0,84,985	0/0:35,0:35:75.10:0,75,887	0/1:46,0:43:45.43:45,0,64	0/0:24,0:24:49.32:0,49,737	0/1:13,2:12:28.49:110,0,28	0/0:28,0:20:22.70:0,23,336	0/0:29,0:29:64.51:0,65,832	0/0:78,0:77:99:0,186,2268	0/0:30,0:27:47.29:0,47,457	0/0:11,0:11:30.08:0,30,365	0/0:43,0:42:99:0,120,1470	0/0:19,0:19:48.58:0,49,593	0/1:38,0:35:99:276,0,106	0/0:23,0:21:57.14:0,57,706	1/1:7,0:7:2.67:33,3,0
chr10	98777845	.	GAGAC	G	433.59	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=7.052;DP=872;FS=8.108;HRun=0;HaplotypeScore=177.6868;InbreedingCoeff=0.3167;MQ=51.67;MQ0=23;MQRankSum=-3.712;QD=2.05;ReadPosRankSum=-2.878;VQSLOD=1.4351;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:70,0:50:27.88:28,0,186	0/1:8,0:8:9.89:10,0,269	0/0:30,0:13:2.97:0,3,20	./.	0/0:33,0:33:39.34:0,39,832	0/0:27,0:27:33.08:0,33,662	0/0:36,0:36:51.13:0,51,1068	1/1:11,0:9:14.98:129,15,0	0/0:37,0:37:26.22:0,26,1049	0/0:43,0:43:65.99:0,66,1302	0/0:23,0:23:30.09:0,30,662	0/0:34,0:34:48.12:0,48,990	0/0:36,0:36:57.18:0,57,1295	0/0:30,1:31:18.93:0,19,1303	0/0:34,0:34:69.21:0,69,1515	0/1:47,0:44:99:100,0,188	0/0:25,0:25:60.13:0,60,1254	0/1:14,0:10:17.36:17,0,161	0/0:25,0:15:15.04:0,15,292	0/0:32,0:32:48.06:0,48,917	0/0:75,0:74:99:0,132,2840	1/1:14,13:25:18.06:283,18,0	0/0:14,0:14:24.07:0,24,495	0/0:47,0:46:90.22:0,90,1886	0/0:23,0:23:39.12:0,39,810	0/1:35,0:32:10.87:11,0,88	0/0:20,0:18:45.12:0,45,913	0/0:9,0:9:0.94:0,1,2
chr10	98777847	.	GAC	G	1353.88	PASS	AB=0.840;AC=10;AF=0.179;AN=56;BaseQRankSum=11.772;DP=873;FS=18.708;HRun=0;HaplotypeScore=146.1635;InbreedingCoeff=0.2501;MQ=51.51;MQ0=23;MQRankSum=-5.403;QD=6.15;ReadPosRankSum=-3.183;VQSLOD=1.6547;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:62,10:51:62.51:186,0,63	0/1:7,0:7:6.88:7,0,248	0/0:31,0:13:32.31:0,32,296	0/0:25,0:7:3.88:0,4,69	0/0:31,0:31:80.94:0,81,1180	0/0:27,0:27:66.16:0,66,943	0/0:37,0:37:96.24:0,96,1414	1/1:10,1:9:14.98:130,15,0	0/0:37,0:37:63.88:0,64,1339	0/0:42,0:42:99:0,99,1777	0/0:26,0:25:69.20:0,69,1022	0/0:34,0:34:64.46:0,64,1299	0/0:36,0:36:93.15:0,93,1471	0/0:30,0:30:80.68:0,81,1417	0/0:36,0:36:90.23:0,90,1457	0/1:15,9:44:74.23:146,0,74	0/0:26,0:26:61.32:0,61,1196	0/1:12,1:9:41.24:41,0,44	0/0:25,0:15:39.10:0,39,518	0/0:31,0:31:82.49:0,82,1237	0/0:74,0:73:99:0,196,3221	0/1:26,1:25:12.58:13,0,266	0/0:14,0:14:36.08:0,36,555	0/0:48,0:46:99:0,135,2110	0/0:23,0:23:60.61:0,61,879	0/1:18,17:32:46.44:843,0,46	0/0:20,0:18:57.19:0,57,1009	1/1:6,2:8:12.50:140,12,0
chr10	98777949	.	C	CACACGA	3752.41	PASS	AB=0.972;AC=9;AF=0.161;AN=56;BaseQRankSum=7.107;DP=830;FS=31.011;HRun=0;HaplotypeScore=204.9478;InbreedingCoeff=0.6004;MQ=49.82;MQ0=17;MQRankSum=-11.117;QD=20.96;ReadPosRankSum=-3.595;VQSLOD=1.3292;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:69,0:64:40.56:1324,41,0	0/0:14,0:14:39.09:0,39,822	0/0:25,0:9:26.76:0,27,427	0/0:34,0:15:18.14:0,18,542	0/0:18,0:18:36.11:0,36,688	0/0:26,0:26:63.17:0,63,1217	0/0:33,0:32:75.24:0,75,1351	1/1:14,0:12:23.72:294,24,0	0/0:33,0:32:84.29:0,84,1692	0/0:34,0:33:72.24:0,72,1449	0/0:18,0:16:26.62:0,27,339	0/0:46,0:44:99:0,108,2185	0/0:17,0:17:45.14:0,45,919	0/0:28,0:28:78.19:0,78,1496	0/0:40,0:40:99:0,102,2116	0/1:40,4:43:99:951,0,100	0/0:28,0:28:69.22:0,69,1456	0/1:20,0:19:30.59:329,0,31	0/0:14,0:13:33.11:0,33,642	0/0:20,0:20:54.14:0,54,950	0/0:80,0:79:99:0,171,3386	0/0:32,0:32:63.05:0,63,1133	0/0:29,0:27:51.15:0,51,1012	0/0:41,0:41:99:0,102,2113	0/0:21,0:20:33.11:0,33,694	0/1:21,0:21:25.08:515,0,25	0/0:20,0:20:54.18:0,54,1172	1/1:11,0:10:26.92:339,27,0
chr10	98777951	.	C	CACGA	3209.43	PASS	AB=0.982;AC=8;AF=0.143;AN=56;BaseQRankSum=7.364;DP=827;FS=25.823;HRun=0;HaplotypeScore=177.2518;InbreedingCoeff=0.4239;MQ=49.85;MQ0=22;MQRankSum=-10.463;QD=19.22;ReadPosRankSum=-3.334;VQSLOD=1.5508;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:58,2:57:42.31:1221,42,0	0/0:14,0:14:39.09:0,39,702	0/0:29,0:9:26.76:0,27,394	0/0:38,0:15:18.14:0,18,530	0/0:18,0:18:39.12:0,39,642	0/0:26,0:26:66.18:0,66,1115	0/0:32,0:31:78.25:0,78,1274	0/1:14,0:12:13.06:268,0,13	0/0:36,0:35:84.29:0,84,1479	0/0:31,0:30:81.27:0,81,1397	0/0:17,0:16:27.01:0,27,365	0/0:46,0:45:99:0,108,1904	0/0:17,0:17:45.15:0,45,791	0/0:29,0:29:81.26:0,81,1408	0/0:39,0:39:99:0,105,1869	0/1:41,1:41:99:764,0,113	0/0:28,0:28:75.23:0,75,1315	0/1:18,1:18:31.73:284,0,32	0/0:14,0:12:36.12:0,36,611	0/0:20,0:20:57.18:0,57,928	0/0:81,0:80:99:0,191,3173	0/0:32,0:32:63.19:0,63,1044	0/0:29,0:27:51:0,51,912	0/0:39,0:40:99:0,102,1806	0/0:22,0:21:35.83:0,36,627	0/1:20,0:20:32.93:512,0,33	0/0:21,0:21:57.17:0,57,1016	1/1:10,0:9:23.11:309,23,0
chr10	98777953	.	C	CGA	2798.80	PASS	AB=0.947;AC=7;AF=0.125;AN=56;BaseQRankSum=8.315;DP=809;FS=26.042;HRun=0;HaplotypeScore=140.2726;InbreedingCoeff=0.2059;MQ=49.84;MQ0=22;MQRankSum=-10.707;QD=18.66;ReadPosRankSum=-4.226;VQSLOD=1.5336;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:40,16:52:39.95:1068,40,0	0/0:14,0:14:38.88:0,39,604	0/0:32,0:9:26.76:0,27,378	0/0:40,0:16:18.14:0,18,522	0/0:17,0:17:39.13:0,39,594	0/0:26,0:26:69.22:0,69,1059	0/0:31,0:30:81.25:0,81,1236	0/1:12,0:10:13.10:268,0,13	0/0:36,0:35:96.25:0,96,1385	0/0:30,0:29:84.28:0,84,1310	0/0:16,0:15:27.06:0,27,365	0/0:47,0:45:99:0,111,1712	0/0:17,0:17:45.13:0,45,679	0/0:29,0:29:84.24:0,84,1270	0/0:37,0:37:99:0,105,1626	0/1:28,7:34:99:623,0,137	0/0:27,0:27:75.24:0,75,1160	0/1:16,2:17:32.34:185,0,32	0/0:14,0:12:36.10:0,36,547	0/0:20,0:20:57.19:0,57,866	0/0:76,2:77:99:0,183,2865	0/0:31,0:31:63.19:0,63,944	0/0:31,0:29:57.15:0,57,850	0/0:41,0:41:99:0,102,1545	0/0:23,0:22:36.12:0,36,577	0/1:19,0:19:37.20:512,0,37	0/0:22,0:22:60.16:0,60,913	0/1:10,0:9:13.46:279,0,13
chr10	98778058	.	GCA	G	597.09	PASS	AB=0.895;AC=21;AF=0.404;AN=52;BaseQRankSum=6.979;DP=604;FS=4.406;HRun=0;HaplotypeScore=107.5451;InbreedingCoeff=-0.3238;MQ=55.56;MQ0=11;MQRankSum=-0.106;QD=1.61;ReadPosRankSum=0.761;VQSLOD=1.7623;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:11.08:0,11,342	0/1:6,3:9:52.42:52,0,87	./.	0/0:28,0:15:3.01:0,3,43	0/1:12,3:16:59.39:59,0,160	0/1:22,5:27:85.62:86,0,378	0/1:23,2:24:9.30:9,0,293	./.	0/0:17,0:22:18.98:0,19,402	0/0:25,1:29:6.04:0,6,477	0/1:14,1:16:3.29:3,0,358	0/0:23,1:23:39.07:0,39,504	0/1:15,2:17:61.64:62,0,118	0/1:17,4:21:50.32:50,0,266	0/1:31,2:33:0.63:1,0,731	0/0:27,0:28:10.40:0,10,184	0/1:32,1:34:4.39:4,0,732	0/1:16,0:15:3.98:4,0,220	0/1:14,0:11:12.26:12,0,251	0/1:17,3:19:0.46:0,0,324	0/0:36,3:38:14.56:0,15,591	0/1:15,2:17:33.73:34,0,310	0/1:14,0:13:17.70:18,0,75	0/1:28,6:35:99:134,0,637	0/1:15,2:16:45.78:46,0,137	1/1:10,0:9:22.73:112,23,0	0/1:23,3:28:43.10:43,0,484	1/1:1,0:1:2.84:14,3,0
chr10	98778066	.	ACACACACACACACACACAC	A	1349.55	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=6.770;DP=689;FS=11.400;HRun=0;HaplotypeScore=312.4334;InbreedingCoeff=0.6700;MQ=53.18;MQ0=12;MQRankSum=-6.507;QD=61.34;ReadPosRankSum=0.848;VQSLOD=1.9996;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:50.05:0,50,3836	0/0:9,0:9:21.07:0,21,1657	0/0:30,0:12:36.12:0,36,1184	0/0:29,0:15:41.80:0,42,1333	0/0:22,0:22:51.17:0,51,3435	0/0:29,0:29:62.74:0,63,5034	0/0:28,0:27:72.24:0,72,3890	0/1:8,0:8:53.75:109,0,54	0/0:26,0:26:66.61:0,67,4686	0/0:37,0:37:99:0,108,7913	0/0:18,0:18:42.13:0,42,3239	0/0:24,0:22:63.22:0,63,4759	0/0:21,0:20:57.19:0,57,3529	0/0:21,0:21:52.71:0,53,3492	0/0:35,0:35:99:0,105,7849	0/0:34,0:31:10.51:0,11,2237	0/0:43,0:42:99:0,114,7731	0/0:18,0:17:26.96:0,27,1868	0/0:15,0:11:33.11:0,33,2416	0/0:22,0:21:54.18:0,54,4045	0/0:45,0:44:99:0,108,7684	0/0:21,0:21:48.16:0,48,3728	0/0:25,0:24:63.20:0,63,3456	0/0:40,0:40:99:0,99,7291	0/0:19,0:18:42.14:0,42,2990	1/1:4,9:12:20.40:1223,20,0	0/0:27,0:27:75.25:0,75,5334	1/1:0,1:1:3.01:135,3,0
chr10	98778094	.	ACG	A	310.25	PASS	AB=0.944;AC=6;AF=0.107;AN=56;BaseQRankSum=7.091;DP=670;FS=19.481;HRun=0;HaplotypeScore=117.6413;InbreedingCoeff=-0.1096;MQ=61.38;MQ0=4;MQRankSum=-0.664;QD=2.75;ReadPosRankSum=1.643;VQSLOD=1.2783;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,1:29:96.20:232,0,96	0/1:8,0:8:16.11:16,0,123	0/0:24,0:12:28.27:0,28,326	0/0:25,0:16:41.68:0,42,390	0/0:29,0:29:29.49:0,29,519	0/0:32,0:33:15.13:0,15,595	0/0:23,0:22:44.51:0,45,640	0/0:21,0:21:60.84:0,61,378	0/0:20,0:20:47.24:0,47,617	0/0:36,0:36:89.77:0,90,1086	0/0:24,0:24:44.74:0,45,646	0/0:24,0:22:59.93:0,60,811	0/1:12,0:12:5.03:5,0,240	0/0:18,0:18:9.62:0,10,450	0/0:30,0:30:57.02:0,57,1004	0/1:33,0:31:15.53:140,0,16	0/0:37,1:38:31.44:0,31,1119	0/1:9,7:16:27.09:27,0,86	0/0:17,0:15:37.54:0,38,500	0/0:22,0:22:31.90:0,32,518	0/0:43,0:42:91.14:0,91,1148	0/0:19,0:19:15.70:0,16,434	0/0:21,0:20:41.91:0,42,389	0/0:38,0:38:4.19:0,4,984	0/1:15,0:14:4.25:4,0,132	0/0:23,0:22:35.33:0,35,262	0/0:24,0:24:25.56:0,26,598	0/0:5,0:5:11.86:0,12,79
chr10	98779093	.	T	TAA	485.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.576;DP=601;FS=28.538;HRun=10;HaplotypeScore=82.4562;InbreedingCoeff=0.8990;MQ=71.16;MQ0=2;MQRankSum=-1.052;QD=30.36;ReadPosRankSum=0.125;VQSLOD=2.0879;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:99:0,120,1212	0/0:10,0:10:27.06:0,27,274	0/0:14,0:12:8.07:0,8,89	0/0:9,0:8:11.49:0,11,100	0/0:46,0:46:99:0,120,1220	0/0:23,0:23:60.08:0,60,595	0/0:16,0:16:42.09:0,42,427	0/0:26,0:26:60.08:0,60,606	0/0:21,0:22:42:0,42,479	0/0:24,0:24:69.13:0,69,697	0/0:24,0:24:60.11:0,60,610	0/0:14,0:14:30.01:0,30,305	0/0:21,0:21:48.08:0,48,488	0/0:13,0:13:27.05:0,27,275	0/0:18,0:18:42.09:0,42,427	1/1:2,14:16:39.13:581,39,0	0/0:33,0:34:92.91:0,93,918	0/0:24,0:25:68.88:0,69,683	0/0:18,0:19:47.83:0,48,532	0/0:26,0:26:69.15:0,69,701	0/0:26,0:26:69.12:0,69,702	0/0:22,0:22:48.09:0,48,488	0/0:15,0:15:39.03:0,39,383	0/0:23,0:23:57.07:0,57,580	0/0:26,0:26:72.12:0,72,732	0/0:19,0:20:35.80:0,36,418	0/0:18,0:18:54.09:0,54,540	0/0:7,0:7:21.05:0,21,214
chr10	98780457	.	AAAAAAAAG	A	1529.02	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=1.437;DP=551;FS=0.000;HRun=0;HaplotypeScore=134.9385;InbreedingCoeff=0.7033;MQ=50.59;MQ0=28;MQRankSum=-3.836;QD=10.62;ReadPosRankSum=-1.567;VQSLOD=2.2003;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,27:40:3.95:250,4,0	0/0:9,0:9:22.02:0,22,423	0/0:27,0:11:20.40:0,20,272	0/0:16,0:3:6.38:0,6,81	0/0:38,0:38:92.61:0,93,2175	0/0:24,0:22:55.72:0,56,1436	0/0:11,0:8:19.29:0,19,525	1/1:25,0:22:3.92:408,4,0	0/0:20,0:19:54.05:0,54,1443	0/0:23,0:21:51.47:0,51,1043	0/0:15,0:15:37.06:0,37,766	0/0:14,0:14:34.40:0,34,887	0/0:14,0:14:27.82:0,28,514	0/0:16,0:16:35.79:0,36,827	0/0:15,0:15:39.07:0,39,897	0/1:24,0:22:40.15:40,0,57	0/0:40,0:39:99:0,102,2629	1/1:15,0:13:2.17:251,2,0	0/0:30,0:26:72.97:0,73,1167	0/0:18,0:17:40.83:0,41,1046	0/0:8,0:5:10.28:0,10,346	0/0:10,0:9:24.08:0,24,542	0/0:8,0:8:16.59:0,17,274	0/0:12,0:12:21.54:0,22,631	0/0:18,0:18:41.96:0,42,979	1/1:27,2:27:12.24:603,12,0	0/0:21,0:21:56.48:0,56,1180	1/1:8,1:6:8.25:125,8,0
chr10	98780459	.	AAAAAAG	A	1372.31	PASS	AB=0.600;AC=11;AF=0.196;AN=56;BaseQRankSum=3.580;DP=553;FS=1.112;HRun=0;HaplotypeScore=119.0658;InbreedingCoeff=0.8807;MQ=50.78;MQ0=27;MQRankSum=-3.909;QD=9.53;ReadPosRankSum=-2.700;VQSLOD=1.3346;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:38:14.16:158,14,0	0/0:8,0:8:15.49:0,15,268	0/0:27,0:11:20.90:0,21,252	0/0:16,0:3:6.01:0,6,74	0/0:38,0:38:61.65:0,62,1529	0/0:24,0:22:35.18:0,35,990	0/0:11,0:8:18.83:0,19,399	1/1:26,0:23:39.86:389,40,0	0/0:20,0:19:53.88:0,54,1068	0/0:22,0:20:44.90:0,45,804	0/0:15,0:15:35.94:0,36,598	0/0:14,0:14:32.24:0,32,686	0/0:14,0:14:22.39:0,22,340	0/0:17,0:17:18.35:0,18,651	0/0:17,0:17:40.99:0,41,679	0/1:8,16:22:1.11:183,0,1	0/0:40,0:39:99:0,107,2005	1/1:15,0:14:16.40:192,16,0	0/0:30,0:26:70.54:0,71,995	0/0:18,0:17:37.70:0,38,759	0/0:8,0:5:8.04:0,8,258	0/0:10,0:9:24.03:0,24,455	0/0:8,0:8:17.20:0,17,242	0/0:13,0:13:24.05:0,24,485	0/0:19,0:19:42.66:0,43,692	1/1:29,0:27:16.01:467,16,0	0/0:20,0:20:50.12:0,50,835	1/1:10,0:7:15.48:158,15,0
chr10	98781356	.	AAC	A	344.32	PASS	AB=0.878;AC=17;AF=0.386;AN=44;BaseQRankSum=1.575;DP=494;FS=13.623;HRun=0;HaplotypeScore=67.3275;InbreedingCoeff=0.2179;MQ=69.49;MQ0=10;MQRankSum=-0.328;QD=1.59;ReadPosRankSum=2.274;VQSLOD=0.1939;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:47.78:0,48,440	./.	./.	./.	./.	./.	0/0:24,0:24:15.03:0,15,200	./.	0/1:9,2:11:48.74:49,0,116	0/0:17,0:17:9.03:0,9,126	0/0:5,0:5:3.01:0,3,44	0/0:10,0:9:6.01:0,6,69	1/1:7,0:8:2.51:14,3,0	0/0:7,0:7:4.26:0,4,47	1/1:14,1:15:3:32,3,0	0/0:17,0:17:15:0,15,141	0/1:26,6:32:99:135,0,108	0/0:16,0:20:9.95:0,10,96	0/1:18,0:19:8.10:8,0,38	0/1:15,3:18:33.80:54,0,34	1/1:34,0:38:2.84:14,3,0	1/1:7,1:8:3.01:32,3,0	1/1:11,0:15:2.93:32,3,0	1/1:35,0:35:14.54:93,15,0	0/1:15,2:17:22.88:23,0,77	0/0:17,0:17:15.91:0,16,163	0/0:14,0:14:11.96:0,12,111	0/0:1,0:5:3:0,3,26
chr10	98781482	.	AC	A	1199.41	PASS	AB=0.919;AC=13;AF=0.232;AN=56;BaseQRankSum=7.466;DP=534;FS=15.833;HRun=10;HaplotypeScore=68.4775;InbreedingCoeff=0.6931;MQ=87.26;MQ0=1;MQRankSum=-1.113;QD=7.31;ReadPosRankSum=1.062;VQSLOD=0.5015;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:33:44.80:132,45,0	0/0:12,0:12:24:0,24,250	0/0:26,1:27:27.89:0,28,485	0/1:19,1:20:0.17:0,0,164	0/0:18,0:18:41.77:0,42,434	0/0:7,0:21:25.72:0,26,153	0/0:28,0:28:71.88:0,72,732	1/1:7,13:20:32.69:308,33,0	0/0:12,1:20:32.13:0,32,309	0/0:11,0:11:21.05:0,21,227	0/0:12,0:12:23.89:0,24,215	0/0:20,0:20:50.77:0,51,499	0/0:11,0:11:30.04:0,30,311	0/0:11,1:12:3.94:0,4,256	0/0:17,1:18:18.68:0,19,367	0/0:6,0:13:17.36:0,17,109	0/0:29,1:30:35.70:0,36,711	1/1:2,0:13:20.37:60,20,0	0/1:14,2:16:16.02:16,0,289	0/0:10,1:11:0.98:0,1,219	0/0:24,0:24:57.08:0,57,586	0/0:23,0:23:48.11:0,48,516	0/0:15,0:15:35.93:0,36,356	0/0:26,3:28:14.09:0,14,602	0/0:12,2:14:7:0,7,282	1/1:7,19:26:40.74:517,41,0	0/1:20,2:22:1.55:2,0,382	1/1:2,12:14:38.99:338,39,0
chr10	98782535	.	GACACT	G	1375.35	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.713;DP=747;FS=2.797;HRun=0;HaplotypeScore=135.0611;InbreedingCoeff=0.9978;MQ=91.70;MQ0=0;MQRankSum=-7.961;QD=55.01;ReadPosRankSum=2.924;VQSLOD=3.9490;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.30:0,96,2986	0/0:8,0:8:24.08:0,24,776	0/0:35,0:35:99:0,99,2935	0/0:26,0:26:74.71:0,75,2033	0/0:24,0:24:72.23:0,72,2213	0/0:16,0:16:45.15:0,45,1451	0/0:24,0:24:72.23:0,72,2191	0/0:37,0:37:99:0,105,3230	0/0:33,0:33:96.32:0,96,2924	0/0:36,0:36:99:0,105,3207	0/0:20,0:20:60.19:0,60,1817	0/0:33,0:33:96.33:0,96,3054	0/0:26,0:26:78.27:0,78,2455	0/0:24,0:24:72.23:0,72,2222	0/0:27,0:27:81.28:0,81,2590	1/1:0,25:25:66.23:1470,66,0	0/0:27,0:27:78.27:0,78,2520	0/0:25,0:25:75.24:0,75,2344	0/0:29,0:29:87.28:0,87,2702	0/0:23,0:23:66.23:0,66,2100	0/0:40,0:40:99:0,117,3581	0/0:33,0:33:99:0,99,3146	0/0:19,0:19:57.20:0,57,1820	0/0:32,0:32:93.32:0,93,2952	0/0:22,0:22:66.23:0,66,2062	0/0:28,0:28:81.28:0,81,2613	0/0:29,0:29:81.28:0,81,2569	0/0:12,0:12:36.12:0,36,1134
chr10	98782628	.	CAT	C	919.81	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.577;DP=718;FS=8.423;HRun=0;HaplotypeScore=85.9764;InbreedingCoeff=0.9977;MQ=71.18;MQ0=0;MQRankSum=-3.126;QD=35.38;ReadPosRankSum=1.577;VQSLOD=5.8968;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,2684	0/0:14,0:14:42.14:0,42,774	0/0:12,0:12:36.12:0,36,632	0/0:31,0:30:80.57:0,81,1423	0/0:24,0:24:72.23:0,72,1292	0/0:25,0:25:66.23:0,66,1236	0/0:22,0:22:60.19:0,60,1075	0/0:42,0:42:99:0,114,2099	0/0:26,0:26:75.22:0,75,1322	0/0:34,0:34:96.33:0,96,1764	0/0:22,0:22:63.22:0,63,1170	0/0:23,0:23:69.24:0,69,1285	0/0:23,0:23:66.16:0,66,1109	0/0:24,0:24:69.22:0,69,1260	0/0:27,0:27:75.26:0,75,1404	1/1:2,24:26:69.23:1015,69,0	0/0:27,0:27:78.07:0,78,1460	0/0:28,0:28:81.28:0,81,1490	0/0:19,0:19:51.17:0,51,939	0/0:18,0:18:51.17:0,51,955	0/0:44,0:44:99:0,132,2344	0/0:23,0:23:63.20:0,63,1133	0/0:12,0:12:36.12:0,36,674	0/0:35,0:35:99:0,99,1817	0/0:25,0:25:75.22:0,75,1332	0/0:30,0:30:90.30:0,90,1644	0/0:24,0:24:72.23:0,72,1300	0/0:8,0:8:24.08:0,24,449
chr10	98784767	.	A	ACG	658.17	PASS	AB=0.830;AC=7;AF=0.125;AN=56;BaseQRankSum=8.669;DP=635;FS=15.178;HRun=0;HaplotypeScore=113.0308;InbreedingCoeff=0.2761;MQ=57.86;MQ0=2;MQRankSum=-9.614;QD=6.65;ReadPosRankSum=-2.392;VQSLOD=1.5418;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:1.30:1,0,1	0/0:11,0:11:30.10:0,30,488	0/0:28,0:18:31.43:0,31,547	0/0:32,0:20:53.56:0,54,686	0/0:22,0:22:63.19:0,63,975	0/0:36,0:36:99:0,102,1559	0/0:21,0:21:63.16:0,63,948	0/1:17,7:24:62.14:357,0,62	0/0:22,0:22:66.21:0,66,1041	0/0:22,0:22:66.22:0,66,1052	0/0:20,0:20:57.19:0,57,928	0/0:18,0:18:45.13:0,45,683	0/0:14,0:14:42.13:0,42,659	0/0:20,0:20:60.20:0,60,975	0/0:29,0:29:87.28:0,87,1391	1/1:3,8:11:8.05:102,8,0	0/0:34,0:34:99:0,99,1606	0/1:9,0:9:9.24:52,0,9	0/0:20,0:19:57.07:0,57,842	0/0:23,0:23:69.19:0,69,1049	0/0:39,0:38:99:0,114,1797	0/0:16,0:16:45.14:0,45,704	0/0:23,0:23:66.17:0,66,978	0/0:40,0:39:99:0,117,1840	0/0:19,0:19:51.17:0,51,823	0/1:11,10:20:64.05:200,0,64	0/0:23,0:23:63.16:0,63,938	0/1:5,4:9:20.40:71,0,20
chr10	98784769	.	G	GCA	548.04	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=10.393;DP=641;FS=8.964;HRun=0;HaplotypeScore=117.2540;InbreedingCoeff=0.6684;MQ=57.48;MQ0=2;MQRankSum=-9.618;QD=5.17;ReadPosRankSum=-3.453;VQSLOD=1.5156;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,16:24:11.15:91,11,0	0/0:11,0:11:27.06:0,27,315	0/0:28,0:16:22.59:0,23,249	0/0:34,0:19:35.66:0,36,457	0/0:22,0:22:60.19:0,60,755	0/0:37,0:37:99:0,102,1264	0/0:22,0:22:51.16:0,51,648	0/1:29,0:27:99:131,0,114	0/0:22,0:22:54.06:0,54,663	0/0:23,0:23:57.15:0,57,700	0/0:20,0:20:48.15:0,48,610	0/0:17,0:17:36.10:0,36,445	0/0:14,0:14:39.12:0,39,495	0/0:20,0:20:54.17:0,54,686	0/0:31,0:31:84.24:0,84,1041	1/1:11,0:11:0.86:60,1,0	0/0:35,0:35:81.17:0,81,978	1/1:4,6:10:12:149,12,0	0/0:19,0:18:54.15:0,54,658	0/0:23,0:23:59.97:0,60,725	0/0:39,0:38:93.29:0,93,1174	0/0:15,0:15:36.12:0,36,457	0/0:23,0:23:60.18:0,60,750	0/0:39,0:38:99:0,102,1290	0/0:19,0:19:42.13:0,42,535	0/1:22,0:21:31.71:161,0,32	0/0:22,0:22:57.18:0,57,722	1/1:9,0:9:20.49:110,20,0
chr10	98784781	.	G	GCA	478.73	PASS	AB=0.870;AC=5;AF=0.089;AN=56;BaseQRankSum=7.158;DP=648;FS=0.858;HRun=0;HaplotypeScore=111.9412;InbreedingCoeff=0.0402;MQ=54.48;MQ0=3;MQRankSum=-5.974;QD=5.44;ReadPosRankSum=-1.258;VQSLOD=3.0814;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:9.44:0,9,38	0/0:11,0:11:21.05:0,21,252	0/0:26,0:11:18.02:0,18,212	0/0:36,0:20:48.78:0,49,589	0/0:22,0:22:57.18:0,57,731	0/0:38,0:38:87.28:0,87,1116	0/0:23,0:23:60.15:0,60,750	0/1:27,0:25:20.99:21,0,48	0/0:22,0:22:57.12:0,57,690	0/0:29,0:29:63.18:0,63,771	0/0:18,0:18:48.14:0,48,603	0/0:14,0:14:33.10:0,33,408	0/0:18,0:18:48.14:0,48,601	0/0:22,0:22:63.16:0,63,788	0/0:30,0:30:84.25:0,84,1052	0/1:13,0:13:2.75:34,0,3	0/0:33,0:33:78.14:0,78,957	0/1:13,0:13:10.08:10,0,20	0/0:21,0:20:27.08:0,27,335	0/0:21,0:21:60.19:0,60,769	0/0:37,0:36:93.30:0,93,1192	0/0:12,0:12:30.08:0,30,370	0/0:22,0:22:60.18:0,60,756	0/0:40,0:39:93.19:0,93,1141	0/0:19,0:19:48.11:0,48,586	0/1:14,9:22:99:318,0,121	0/0:19,0:19:45.15:0,45,578	0/1:5,7:12:28.37:211,0,28
chr10	98784790	.	CAT	C	519.24	PASS	AB=0.840;AC=9;AF=0.161;AN=56;BaseQRankSum=10.378;DP=655;FS=7.733;HRun=0;HaplotypeScore=110.0335;InbreedingCoeff=0.5577;MQ=56.51;MQ0=3;MQRankSum=-6.839;QD=4.36;ReadPosRankSum=-2.801;VQSLOD=1.6051;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:28:4.92:13,5,0	0/0:13,0:13:35.07:0,35,497	0/0:35,0:22:53.21:0,53,727	0/0:35,0:21:40.17:0,40,1012	0/0:24,0:24:69.17:0,69,1249	0/0:37,0:37:99:0,108,1930	0/0:23,0:23:69.19:0,69,1308	1/1:20,5:23:32.19:337,32,0	0/0:19,0:19:57.19:0,57,1111	0/0:29,0:29:86.20:0,86,1400	0/0:17,0:17:48.63:0,49,927	0/0:14,0:14:39.12:0,39,730	0/0:19,0:19:57.16:0,57,1066	0/0:23,0:23:66.21:0,66,1268	0/0:30,0:30:90.28:0,90,1699	0/1:16,0:16:23.36:23,0,67	0/0:33,0:33:94.02:0,94,1637	1/1:12,0:12:17.19:104,17,0	0/0:19,0:18:51.09:0,51,736	0/0:24,0:24:69.19:0,69,1259	0/0:36,0:35:99:0,105,1957	0/0:11,0:11:33.10:0,33,620	0/0:21,0:21:60.21:0,60,1212	0/0:36,0:35:99:0,105,1949	0/0:19,0:19:54.19:0,54,1060	0/1:15,8:22:21.39:146,0,21	0/0:18,0:18:54.08:0,54,970	0/1:10,4:14:32.98:45,0,33
chr10	98784791	.	ATG	A	1526.67	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.431;DP=637;FS=10.825;HRun=0;HaplotypeScore=102.1977;InbreedingCoeff=0.9578;MQ=56.83;MQ0=3;MQRankSum=-6.897;QD=13.39;ReadPosRankSum=-1.372;VQSLOD=2.4011;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,16:23:11.85:83,12,0	0/0:12,0:12:25.14:0,25,516	0/0:35,0:22:60.06:0,60,1029	0/0:34,0:21:53.28:0,53,1058	0/0:24,0:24:72.22:0,72,1344	0/0:34,0:34:99:0,99,1867	0/0:24,0:24:72.03:0,72,1284	1/1:16,10:24:57.65:675,58,0	0/0:19,0:19:57.18:0,57,1103	0/0:28,0:28:74.51:0,75,1280	0/0:17,0:17:48.16:0,48,857	0/0:14,0:14:39.13:0,39,710	0/0:19,0:19:57.20:0,57,1118	0/0:22,0:22:66.20:0,66,1245	0/0:29,0:29:86.87:0,87,1549	1/1:15,1:16:3.45:154,3,0	0/0:32,0:32:67.83:0,68,1615	1/1:2,9:11:21.03:248,21,0	0/0:18,0:17:49.72:0,50,871	0/0:24,0:24:72.14:0,72,1284	0/0:35,0:34:99:0,102,1897	0/0:11,0:11:33.10:0,33,584	0/0:21,0:21:60.21:0,60,1179	0/0:34,0:33:99:0,99,1801	0/0:19,0:19:54.17:0,54,1006	1/1:22,1:22:28.80:346,29,0	0/0:18,0:18:54.18:0,54,996	1/1:15,0:15:24.66:200,25,0
chr10	98784793	.	GCA	G	38.61	PASS	AB=0.911;AC=8;AF=0.143;AN=56;BaseQRankSum=5.966;DP=641;FS=1.842;HRun=0;HaplotypeScore=107.9114;InbreedingCoeff=0.3935;MQ=56.89;MQ0=3;MQRankSum=-2.478;QD=0.33;ReadPosRankSum=-0.043;VQSLOD=1.8021;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:7.30:21,7,0	0/1:11,1:12:3.76:4,0,449	0/0:34,0:22:57.19:0,57,872	0/0:35,0:23:49.05:0,49,770	0/0:24,0:24:66.23:0,66,1077	0/0:33,1:34:50.26:0,50,1248	0/0:26,1:27:11.29:0,11,697	0/0:27,0:25:20.84:0,21,119	0/0:18,0:18:54.18:0,54,868	0/1:21,2:24:24.55:25,0,775	0/1:15,2:17:31.73:32,0,545	0/0:14,0:14:27.09:0,27,440	0/0:21,0:21:60.20:0,60,959	0/0:23,0:23:54.18:0,54,881	0/1:27,2:29:10.66:11,0,863	0/0:14,0:16:18.86:0,19,184	0/0:31,1:32:44.38:0,44,1233	1/1:11,0:11:12.29:80,12,0	0/0:19,0:18:45.13:0,45,688	0/0:25,0:25:57.19:0,57,925	0/0:36,0:35:78.23:0,78,1211	0/0:9,0:9:21.07:0,21,342	0/0:21,0:21:54.15:0,54,830	0/0:33,0:32:69.24:0,69,1120	0/0:18,0:18:36.12:0,36,587	0/0:24,0:23:30.84:0,31,313	0/0:19,0:19:45.14:0,45,693	0/0:15,0:15:21.12:0,21,192
chr10	98785031	.	C	CA	2463.77	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.800;DP=588;FS=2.438;HRun=0;HaplotypeScore=59.0780;InbreedingCoeff=0.9993;MQ=85.30;MQ0=0;MQRankSum=-4.270;QD=41.06;ReadPosRankSum=5.350;VQSLOD=4.0417;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,35:36:96.33:1532,96,0	0/0:11,0:11:33.11:0,33,441	0/0:23,0:23:62.43:0,62,680	0/0:16,0:16:42.12:0,42,550	0/0:14,0:14:34.67:0,35,397	0/0:19,0:19:54.15:0,54,725	0/0:28,0:28:81.14:0,81,1045	0/0:25,0:25:69.16:0,69,876	0/0:17,0:17:47.78:0,48,596	0/0:20,0:20:54.16:0,54,709	0/0:15,0:15:39.94:0,40,503	0/0:13,0:13:36.12:0,36,499	0/0:22,0:22:66.21:0,66,879	0/0:23,0:23:66.20:0,66,881	0/0:18,0:18:51.16:0,51,694	0/0:15,0:15:45.11:0,45,604	0/0:22,0:22:66.22:0,66,919	1/1:1,23:24:66.23:1054,66,0	0/0:21,0:21:53.62:0,54,663	0/0:14,0:14:33.99:0,34,453	0/0:39,0:39:99:0,114,1488	0/0:14,0:14:32.83:0,33,404	0/0:22,0:22:59.11:0,59,743	0/0:30,0:30:87.10:0,87,1119	0/0:24,0:24:71.85:0,72,870	0/0:25,0:25:69.19:0,69,903	0/0:26,0:26:78.17:0,78,1050	0/0:12,0:12:32.94:0,33,430
chr10	98785860	.	AT	A	1595.57	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.893;DP=708;FS=3.899;HRun=7;HaplotypeScore=64.9654;InbreedingCoeff=0.9991;MQ=73.72;MQ0=0;MQRankSum=-1.837;QD=26.59;ReadPosRankSum=-2.412;VQSLOD=3.5490;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,168,2074	0/0:15,0:15:42.12:0,42,515	0/0:16,0:15:29.98:0,30,340	0/0:24,0:24:54.15:0,54,654	0/0:31,0:31:81.23:0,81,987	0/0:24,0:24:63.13:0,63,771	0/0:27,0:27:81.26:0,81,1019	1/1:2,29:31:87.18:881,87,0	0/0:26,0:26:69.22:0,69,865	0/0:20,0:20:57.17:0,57,700	0/0:17,0:17:48.12:0,48,577	0/0:23,0:23:54.17:0,54,675	0/0:20,0:20:57.18:0,57,715	0/0:23,0:23:63.19:0,63,778	0/0:33,0:33:87.27:0,87,1082	0/0:16,0:16:48.14:0,48,592	0/0:31,0:31:84.26:0,84,1044	0/0:17,0:17:45.14:0,45,566	0/0:21,0:21:54.17:0,54,679	0/0:22,0:22:60.18:0,60,742	0/0:33,0:33:90.25:0,90,1104	0/0:32,0:32:84.26:0,84,1044	0/0:18,0:18:54.17:0,54,677	0/0:37,0:37:99:0,105,1308	0/0:23,0:23:66.20:0,66,817	1/1:0,20:20:60.14:612,60,0	0/0:36,0:36:99:0,99,1233	1/1:0,9:9:24.05:245,24,0
chr10	98786067	.	TCTCCCCCCCC	T	2702.47	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=4.691;DP=501;FS=0.591;HRun=0;HaplotypeScore=140.8509;InbreedingCoeff=0.6342;MQ=70.89;MQ0=5;MQRankSum=-5.909;QD=22.15;ReadPosRankSum=-1.709;VQSLOD=2.8606;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:6.02:110,6,0	0/0:9,0:9:27.06:0,27,1020	0/0:26,0:20:50.62:0,51,1402	0/1:26,0:14:40.07:40,0,836	0/0:16,0:16:30.09:0,30,1040	0/0:21,0:21:54.14:0,54,2102	0/0:26,0:26:75.25:0,75,2978	1/1:23,0:23:19.47:901,19,0	0/0:19,0:18:45.61:0,46,1702	0/0:28,0:26:72.24:0,72,2873	0/0:15,0:15:40.01:0,40,1239	0/0:11,0:11:30.10:0,30,1221	0/0:7,0:7:18.53:0,19,790	0/0:17,0:17:45.15:0,45,1634	0/0:12,0:12:36.11:0,36,1462	0/1:17,0:15:12.03:241,0,12	0/0:20,0:20:54.19:0,54,2067	1/1:8,0:8:18.03:295,18,0	0/0:18,0:18:35.68:0,36,1137	0/0:15,0:15:39.10:0,39,1225	0/0:33,0:33:87.11:0,87,3586	0/0:15,0:14:39.07:0,39,1437	0/0:11,0:11:33.11:0,33,1426	0/0:29,0:29:84.25:0,84,3653	0/0:16,0:16:42.14:0,42,1586	0/1:19,0:18:92.88:840,0,93	0/0:14,0:14:23.36:0,23,960	1/1:11,0:10:21.07:441,21,0
chr10	98786069	.	TCCCCCCCC	T	2787.21	PASS	AB=0.861;AC=12;AF=0.214;AN=56;BaseQRankSum=4.323;DP=497;FS=0.591;HRun=9;HaplotypeScore=120.5254;InbreedingCoeff=0.7362;MQ=67.78;MQ0=8;MQRankSum=-6.775;QD=23.03;ReadPosRankSum=-1.849;VQSLOD=-0.1371;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:6.02:92,6,0	0/0:9,0:9:27.06:0,27,939	0/0:31,0:19:50.19:0,50,1369	0/1:25,1:12:39.43:39,0,820	0/0:15,0:14:30.09:0,30,958	0/0:19,0:19:54.14:0,54,1945	0/0:27,0:26:78.26:0,78,2893	1/1:10,12:22:34.72:958,35,0	0/0:17,0:16:45.14:0,45,1570	0/0:28,0:26:75.25:0,75,2770	0/0:15,0:15:40.01:0,40,1218	0/0:11,0:11:33.11:0,33,1288	0/0:7,0:7:18.53:0,19,737	0/0:17,0:16:45.15:0,45,1555	0/0:12,0:12:36.11:0,36,1341	1/1:16,1:15:3.75:245,4,0	0/0:18,0:18:54.19:0,54,1960	1/1:8,0:8:18.03:316,18,0	0/0:15,0:16:41.64:0,42,1299	0/0:15,0:15:38.87:0,39,1161	0/0:34,0:34:87.17:0,87,3314	0/0:15,0:14:39.07:0,39,1309	0/0:13,0:13:39.13:0,39,1499	0/0:29,0:29:84.25:0,84,3323	0/0:14,0:14:42.14:0,42,1486	0/1:13,6:18:9.01:842,0,9	0/0:14,0:14:29.65:0,30,1114	1/1:7,4:10:21.07:464,21,0
chr10	98786208	.	CTG	C	356.44	PASS	AB=0.856;AC=4;AF=0.071;AN=56;BaseQRankSum=7.572;DP=783;FS=0.803;HRun=0;HaplotypeScore=128.3460;InbreedingCoeff=-0.0810;MQ=58.94;MQ0=8;MQRankSum=-4.810;QD=4.46;ReadPosRankSum=-2.718;VQSLOD=2.5043;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:6.02:0,6,106	0/0:13,0:13:39.12:0,39,718	0/0:38,0:23:54.57:0,55,759	0/0:51,0:27:47.58:0,48,854	0/0:35,0:35:95.33:0,95,1652	0/0:24,0:24:72.25:0,72,1387	0/0:36,0:36:99:0,105,1872	0/1:21,4:21:87.57:88,0,526	0/0:29,0:29:81.26:0,81,1489	0/0:35,0:35:99:0,105,1807	0/0:29,0:29:87.26:0,87,1589	0/0:25,0:25:72.22:0,72,1296	0/0:16,0:16:48.16:0,48,918	0/0:22,0:22:57.16:0,57,1031	0/0:29,0:29:81.25:0,81,1484	0/0:17,0:17:33.10:0,33,582	0/0:32,0:30:87.28:0,87,1629	0/1:12,0:12:21.57:22,0,281	0/0:24,0:23:66.08:0,66,1120	0/0:17,0:17:51.17:0,51,958	0/0:48,0:48:99:0,122,2078	0/0:42,0:42:99:0,123,2244	0/0:21,0:21:60.18:0,60,1074	0/0:47,0:47:99:0,126,2327	0/0:26,0:26:75.23:0,75,1360	0/1:28,7:35:99:241,0,1090	0/0:24,0:24:72.21:0,72,1294	0/1:5,3:8:99:115,0,164
chr10	98786210	.	G	GTCTCTGTCTCTC	3007.92	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=7.913;DP=785;FS=1.894;HRun=0;HaplotypeScore=266.4457;InbreedingCoeff=0.8740;MQ=59.55;MQ0=8;MQRankSum=-8.534;QD=26.16;ReadPosRankSum=-1.772;VQSLOD=2.2263;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:23:4.53:175,5,0	0/0:13,0:13:36.10:0,36,1038	0/0:39,0:23:18.75:0,19,311	0/0:51,0:27:18.27:0,18,373	0/0:35,0:35:56.85:0,57,1683	0/0:25,0:25:60.15:0,60,1757	0/0:36,0:36:72.20:0,72,1956	0/1:21,0:17:4.80:196,0,5	0/0:29,0:29:63.10:0,63,1714	0/0:36,0:36:90.24:0,90,2618	0/0:29,0:29:75.20:0,75,2102	0/0:25,0:25:60.14:0,60,1745	0/0:17,0:17:39.09:0,39,1231	0/0:22,0:22:60.05:0,60,1564	0/0:28,0:28:60.20:0,60,1862	1/1:17,0:17:30.10:631,30,0	0/0:34,0:32:69.21:0,69,2169	1/1:12,0:12:14:155,14,0	0/0:24,0:23:36.03:0,36,860	0/0:18,0:18:48.15:0,48,1474	0/0:49,0:49:99:0,110,2860	0/0:41,0:41:90.28:0,90,2662	0/0:20,0:20:45.10:0,45,1368	0/0:46,0:46:99:0,102,3235	0/0:28,0:28:63.13:0,63,1786	1/1:29,5:34:56.92:1420,57,0	0/0:24,0:24:54.14:0,54,1520	1/1:6,2:8:15.05:601,15,0
chr10	98786218	.	C	CTCTCTCTG	2247.86	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=3.102;DP=782;FS=4.925;HRun=0;HaplotypeScore=207.6919;InbreedingCoeff=0.4291;MQ=61.43;MQ0=9;MQRankSum=-6.253;QD=23.66;ReadPosRankSum=0.131;VQSLOD=2.6223;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:3.01:91,3,0	0/0:12,0:12:36.12:0,36,940	0/0:44,0:25:24.51:0,25,685	0/0:56,0:27:38.33:0,38,694	0/0:32,0:32:75.21:0,75,1710	0/0:27,0:27:75.21:0,75,1729	0/0:30,0:30:78.27:0,78,1969	0/0:17,0:12:14.96:0,15,166	0/0:30,0:30:72.14:0,72,1653	0/0:39,0:39:99:0,105,2588	0/0:28,0:28:78.25:0,78,1960	0/0:21,0:21:60.21:0,60,1569	0/0:18,0:18:48.15:0,48,1125	0/0:21,0:21:57.20:0,57,1449	0/0:27,0:27:72.25:0,72,1783	1/1:5,14:22:42.14:1718,42,0	0/0:37,0:35:84.29:0,84,2086	0/1:11,0:11:99:173,0,137	0/0:22,0:21:54.02:0,54,1059	0/0:19,0:19:51.17:0,51,1334	0/0:50,0:50:99:0,135,3070	0/0:42,0:42:99:0,102,2517	0/0:22,0:22:48.16:0,48,1209	0/0:44,0:44:99:0,108,2784	0/0:25,0:25:75.25:0,75,1768	0/1:32,0:32:99:259,0,390	0/0:23,0:23:63.19:0,63,1513	0/1:8,0:8:73.47:140,0,73
chr10	98786229	.	T	TCA	1617.59	PASS	AB=0.980;AC=10;AF=0.179;AN=56;BaseQRankSum=10.403;DP=736;FS=2.477;HRun=0;HaplotypeScore=122.7989;InbreedingCoeff=0.7542;MQ=63.53;MQ0=7;MQRankSum=-7.822;QD=13.37;ReadPosRankSum=-4.870;VQSLOD=2.6691;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:5,14:19:27.06:439,27,0	0/0:11,0:11:30.06:0,30,342	0/1:43,0:27:48.10:48,0,356	0/0:48,0:22:36.79:0,37,367	0/0:26,0:26:63.08:0,63,711	0/0:27,0:26:69.19:0,69,848	0/0:28,0:28:60.15:0,60,720	1/1:16,0:12:26.80:279,27,0	0/0:28,0:28:69.18:0,69,838	0/0:37,0:37:99:0,105,1246	0/0:28,0:28:69.22:0,69,878	0/0:22,0:22:57.16:0,57,699	0/0:16,0:16:39.10:0,39,469	0/0:22,0:22:51.13:0,51,607	0/0:26,0:26:69.18:0,69,839	0/0:19,0:19:30.01:0,30,314	0/0:38,0:36:96.25:0,96,1167	1/1:5,7:12:24.08:401,24,0	0/0:18,0:17:45.06:0,45,476	0/0:21,0:21:54.10:0,54,643	0/0:55,0:55:99:0,139,1689	0/0:35,0:35:99:0,99,1193	0/0:19,0:19:48.14:0,48,597	0/0:42,0:42:99:0,114,1335	0/0:28,0:28:66.17:0,66,799	0/1:23,1:24:30.02:380,0,30	0/0:21,0:21:54.12:0,54,634	1/1:7,0:7:21.06:239,21,0
chr10	98786239	.	A	ACACTCT	2988.38	PASS	AB=0.710;AC=5;AF=0.089;AN=56;BaseQRankSum=2.808;DP=738;FS=0.580;HRun=0;HaplotypeScore=173.3595;InbreedingCoeff=0.7399;MQ=66.68;MQ0=7;MQRankSum=-7.603;QD=63.58;ReadPosRankSum=-3.225;VQSLOD=3.1076;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:11.16:0,11,27	0/0:11,0:11:33.07:0,33,638	0/0:46,0:32:72.62:0,73,1093	0/0:49,0:26:27.96:0,28,859	0/0:22,0:22:63.11:0,63,1275	0/0:25,0:24:69.21:0,69,1594	0/0:25,0:25:69.19:0,69,1448	1/1:3,14:16:45.11:1292,45,0	0/0:29,0:29:81.22:0,81,1714	0/0:39,0:39:99:0,117,2433	0/0:26,0:26:75.24:0,75,1768	0/0:19,0:19:57.17:0,57,1302	0/0:14,0:14:42.12:0,42,903	0/0:20,0:20:60.12:0,60,1197	0/0:28,0:28:78.24:0,78,1725	0/0:26,0:26:37.83:0,38,654	0/0:40,0:38:99:0,107,2304	0/0:9,0:9:7.09:0,7,16	0/0:20,0:20:60.11:0,60,923	0/0:22,0:22:63.10:0,63,1272	0/0:58,0:59:99:0,162,3551	0/0:37,0:37:99:0,108,2282	0/0:17,0:17:51.16:0,51,1177	0/0:44,0:44:99:0,99,2527	0/0:23,0:23:69.22:0,69,1562	0/1:13,9:22:90.56:1130,0,91	0/0:22,0:22:60.10:0,60,1191	1/1:0,7:7:21.07:695,21,0
chr10	98786331	.	TCA	T	777.85	PASS	AB=0.914;AC=14;AF=0.269;AN=52;BaseQRankSum=5.045;DP=644;FS=1.691;HRun=0;HaplotypeScore=113.2464;InbreedingCoeff=0.2210;MQ=52.54;MQ0=14;MQRankSum=0.116;QD=4.42;ReadPosRankSum=-3.751;VQSLOD=1.1769;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:14:0:0,0,1	0/1:7,0:7:11.22:11,0,142	./.	0/1:5,0:2:0.88:1,0,13	0/1:14,2:16:78.30:78,0,163	0/0:19,0:18:20.88:0,21,199	0/0:37,0:36:44.99:0,45,569	./.	0/0:40,0:40:13.02:0,13,525	1/1:18,23:40:32.37:368,32,0	1/1:10,1:10:14.63:110,15,0	0/0:25,3:27:22.96:0,23,727	0/0:19,0:20:4.97:0,5,428	0/0:31,0:28:15.19:0,15,515	0/0:37,0:36:10.77:0,11,660	0/0:35,0:35:42.02:0,42,564	0/0:44,0:44:26.53:0,27,744	0/1:4,0:3:8.08:8,0,31	0/1:16,4:20:68.83:69,0,238	0/0:16,0:15:21.01:0,21,276	0/0:61,0:56:56.52:0,57,1206	0/0:20,0:18:26.63:0,27,270	0/0:16,0:16:15.02:0,15,186	0/0:37,1:37:2.92:0,3,669	1/1:6,13:19:12.03:137,12,0	0/1:13,0:16:22.18:102,0,22	0/1:27,0:27:34.16:34,0,445	0/1:6,0:6:6.99:17,0,7
chr10	98786398	.	CCG	C	209.26	PASS	AB=0.928;AC=8;AF=0.143;AN=56;BaseQRankSum=5.659;DP=653;FS=62.191;HRun=0;HaplotypeScore=121.4507;InbreedingCoeff=-0.1614;MQ=61.53;MQ0=16;MQRankSum=-3.673;QD=1.05;ReadPosRankSum=-0.966;VQSLOD=-0.5124;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,3:27:4.09:4,0,482	0/0:6,0:6:14.89:0,15,145	0/0:39,0:17:42.24:0,42,517	0/0:67,0:23:25.36:0,25,668	0/0:14,0:12:23.91:0,24,347	0/0:15,0:15:21.45:0,21,539	0/0:28,2:29:55.72:0,56,774	0/0:26,0:25:68.29:0,68,915	0/0:23,0:23:38.85:0,39,763	0/0:32,0:31:37.97:0,38,1359	0/0:14,0:14:36.06:0,36,572	0/0:21,0:21:54.10:0,54,747	0/0:17,0:17:30.09:0,30,420	0/0:21,0:21:18.33:0,18,617	0/0:34,0:34:52.15:0,52,1227	0/1:17,1:18:8.78:9,0,190	0/1:29,1:30:11.34:11,0,938	0/1:8,4:11:99:194,0,210	0/0:21,0:20:19.78:0,20,536	0/0:13,2:15:29.15:0,29,330	0/1:42,1:42:10.34:10,0,723	0/0:10,0:9:15.92:0,16,224	0/0:6,0:6:12.04:0,12,208	0/1:38,1:39:58.35:58,0,854	0/0:20,0:20:39.11:0,39,687	0/0:22,0:21:4.60:0,5,349	0/1:17,2:19:10.60:11,0,457	0/1:12,0:11:37.78:38,0,163
chr10	98786400	.	GTCTCTC	G	999.34	PASS	AB=0.957;AC=12;AF=0.214;AN=56;BaseQRankSum=0.999;DP=648;FS=2.460;HRun=0;HaplotypeScore=157.6110;InbreedingCoeff=0.0356;MQ=59.55;MQ0=18;MQRankSum=-1.193;QD=4.15;ReadPosRankSum=-0.572;VQSLOD=2.6562;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:35.01:0,35,643	0/0:6,0:6:8.91:0,9,90	0/0:37,0:15:5.05:0,5,51	0/0:62,0:19:3.01:0,3,66	0/0:13,0:11:21.06:0,21,424	0/0:15,0:15:27.08:0,27,663	0/0:32,0:31:21.97:0,22,686	1/1:20,5:24:15.01:219,15,0	0/0:23,0:23:36.07:0,36,701	0/1:31,1:31:14.91:15,0,827	0/0:14,0:14:24.07:0,24,592	0/0:20,0:20:33.02:0,33,621	0/1:16,0:16:31.37:31,0,461	0/0:22,0:21:19.41:0,19,418	0/0:35,0:35:46.64:0,47,1235	0/1:15,0:18:13.58:14,0,23	0/0:29,0:29:60.16:0,60,1090	0/0:12,0:11:28.45:0,28,429	0/0:19,0:18:15.02:0,15,145	0/1:14,0:15:37.52:38,0,126	0/1:39,0:39:99:106,0,364	0/0:12,0:11:15.03:0,15,184	0/0:7,0:7:9.03:0,9,175	0/1:38,0:39:43.31:43,0,700	0/0:21,0:21:30.10:0,30,802	1/1:22,0:21:1.04:467,1,0	0/1:20,0:20:57.30:57,0,76	0/1:13,0:12:63.83:160,0,64
chr10	98786706	.	CTGTT	C	871.15	PASS	AB=0.511;AC=1;AF=0.018;AN=56;BaseQRankSum=5.979;DP=661;FS=1.961;HRun=0;HaplotypeScore=108.3654;InbreedingCoeff=-0.0090;MQ=79.51;MQ0=0;MQRankSum=-2.344;QD=36.30;ReadPosRankSum=0.135;VQSLOD=3.8053;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,169,4461	0/0:11,0:11:30.10:0,30,810	0/0:20,0:20:54.18:0,54,1333	0/0:21,0:21:53.95:0,54,1268	0/0:28,0:28:84.29:0,84,2219	0/0:22,0:22:63.17:0,63,1640	0/0:18,0:18:45.14:0,45,1158	0/0:17,0:17:51.18:0,51,1379	0/0:20,0:20:57.18:0,57,1448	0/0:19,0:18:51.18:0,51,1318	0/0:17,0:17:45.15:0,45,1209	0/0:23,0:23:66.20:0,66,1670	0/0:22,0:22:60.18:0,60,1494	0/0:14,0:14:42.14:0,42,1134	0/0:24,0:24:72.25:0,72,1916	0/1:1,23:23:23.36:946,0,23	0/0:35,0:35:99:0,102,2736	0/0:21,0:21:57.20:0,57,1522	0/0:21,0:21:63.22:0,63,1665	0/0:18,0:18:54.19:0,54,1456	0/0:53,0:53:99:0,157,4106	0/0:22,0:22:66.23:0,66,1760	0/0:16,0:16:48.16:0,48,1281	0/0:31,0:31:87.30:0,87,2343	0/0:23,0:23:66.20:0,66,1673	0/0:30,0:30:81.28:0,81,2172	0/0:20,0:20:54.19:0,54,1453	0/0:13,0:13:39.13:0,39,1053
chr10	98787980	.	T	TCA	1087.18	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=-3.652;DP=869;FS=3.333;HRun=0;HaplotypeScore=116.7003;InbreedingCoeff=0.5971;MQ=66.08;MQ0=0;MQRankSum=-1.397;QD=9.37;ReadPosRankSum=-0.268;VQSLOD=3.5122;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,99,1229	0/0:13,0:13:33.08:0,33,404	0/1:37,0:32:2.96:3,0,783	0/1:43,0:40:0.91:1,0,671	0/0:22,0:22:48.15:0,48,609	0/0:34,0:35:96.09:0,96,1155	0/0:24,0:24:60.17:0,60,746	0/0:38,0:37:66.20:0,66,828	0/0:27,0:27:68.74:0,69,898	0/0:29,0:28:66.20:0,66,827	0/0:13,0:13:39.12:0,39,496	0/0:45,0:45:99:0,111,1411	0/0:26,0:26:78.23:0,78,978	0/0:25,0:25:69.22:0,69,877	0/0:42,0:42:96.29:0,96,1209	1/1:5,30:36:72.24:1181,72,0	0/0:30,0:30:75.24:0,75,952	0/0:33,0:33:72.20:0,72,899	0/0:17,0:17:39.09:0,39,467	0/0:18,0:18:48.15:0,48,610	0/0:104,0:105:99:0,236,2940	0/0:35,0:35:96.22:0,96,1198	0/0:19,0:19:48.14:0,48,611	0/0:38,0:38:96.31:0,96,1221	0/0:25,0:25:66.16:0,66,821	0/0:23,0:23:60.19:0,60,758	0/0:21,0:21:60.16:0,60,735	0/0:7,0:7:21.07:0,21,270
chr10	98788039	.	AAC	A	1247.25	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=6.769;DP=774;FS=0.000;HRun=0;HaplotypeScore=108.5022;InbreedingCoeff=0.6726;MQ=57.28;MQ0=28;MQRankSum=-0.150;QD=9.90;ReadPosRankSum=1.295;VQSLOD=3.0145;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:33:72.03:859,72,0	0/0:9,0:9:24.08:0,24,384	0/0:59,0:22:18.04:0,18,201	0/1:62,0:21:14.37:14,0,159	0/0:17,0:17:39.13:0,39,619	0/0:27,0:26:48.16:0,48,747	0/0:24,0:24:59.70:0,60,882	0/0:25,0:41:22.09:0,22,171	0/0:17,0:17:24.06:0,24,356	0/0:27,0:26:44.70:0,45,638	0/0:14,0:14:36.04:0,36,541	0/0:30,0:30:72.23:0,72,1111	0/0:19,0:19:39.12:0,39,599	0/0:21,0:21:54.18:0,54,852	0/0:32,2:34:38.70:0,39,983	0/0:25,0:25:51.17:0,51,787	0/0:29,0:29:66.21:0,66,1015	1/1:10,21:30:40.99:502,41,0	0/0:17,0:16:36.12:0,36,567	0/0:15,0:15:27.09:0,27,432	0/0:71,3:74:51.36:0,51,2170	0/0:29,0:29:56.98:0,57,782	0/0:19,0:17:30.10:0,30,477	0/0:40,0:40:90.78:0,91,1427	0/0:22,1:23:42.14:0,42,671	0/0:12,0:13:0.88:0,1,53	0/0:16,1:17:9.08:0,9,571	0/0:2,0:6:9.10:0,9,124
chr10	98788091	.	C	CCA	1003.71	PASS	AB=0.892;AC=12;AF=0.240;AN=50;BaseQRankSum=-0.593;DP=670;FS=17.534;HRun=0;HaplotypeScore=108.2646;InbreedingCoeff=-0.0071;MQ=51.89;MQ0=25;MQRankSum=0.522;QD=2.94;ReadPosRankSum=-2.335;VQSLOD=0.5990;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,1:35:61.74:185,0,62	./.	./.	0/1:47,0:8:0:0,0,0	0/1:9,1:10:29.69:30,0,93	0/0:16,0:17:29.16:0,29,266	0/0:21,0:21:16.82:0,17,192	./.	0/0:13,0:15:28.12:0,28,239	0/0:19,0:16:18.17:0,18,176	0/0:9,0:14:8.85:0,9,79	0/1:27,0:27:10.90:11,0,193	0/0:12,0:13:14.83:0,15,125	0/0:17,0:17:14.87:0,15,144	0/0:29,0:30:6.78:0,7,350	1/1:27,0:34:21.92:277,22,0	0/1:23,7:30:99:103,0,156	0/1:22,2:26:34.98:254,0,35	0/1:17,1:16:24.52:56,0,25	0/1:13,4:16:54.48:54,0,67	0/1:48,17:70:2.03:140,0,2	0/0:22,0:23:23.69:0,24,211	0/0:19,0:19:17.09:0,17,151	0/0:38,2:43:8.94:0,9,460	0/0:13,0:14:2.84:0,3,14	0/0:5,0:13:10.69:0,11,61	0/1:15,3:18:35.83:36,0,37	0/0:3,0:11:14.20:0,14,70
chr10	98790027	.	TATATATATATATATATATATATATATATATATATATACACACACAC	T	280.57	PASS	AC=2;AF=0.083;AN=24;BaseQRankSum=1.417;DP=101;FS=0.000;HRun=0;HaplotypeScore=179.6587;InbreedingCoeff=0.2931;MQ=75.96;MQ0=5;MQRankSum=-1.339;QD=16.50;ReadPosRankSum=1.339;VQSLOD=2.0813;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:5,0:2:1.55:0,2,4	0/0:17,0:7:3.95:0,4,51	./.	./.	./.	0/0:8,0:8:20.85:0,21,754	./.	./.	./.	./.	0/0:2,0:2:0.94:0,1,2	./.	./.	1/1:6,11:17:2.81:352,3,0	0/0:26,0:25:58.73:0,59,8028	0/0:14,0:14:19.62:0,20,1597	0/0:1,0:1:3.01:0,3,503	./.	./.	0/0:1,0:1:3.01:0,3,125	./.	0/0:1,0:1:3.01:0,3,123	./.	./.	0/0:1,0:1:3.01:0,3,73	0/0:8,0:6:6.49:0,6,313
chr10	98790051	.	TATATATATATATACACACAC	T	227.05	PASS	AB=0.684;AC=3;AF=0.083;AN=36;BaseQRankSum=2.791;DP=100;FS=0.000;HRun=0;HaplotypeScore=52.1790;InbreedingCoeff=0.1250;MQ=48.16;MQ0=7;MQRankSum=-1.338;QD=9.46;ReadPosRankSum=0.974;VQSLOD=1.0857;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/0:1,0:1:3.01:0,3,86	0/0:1,0:1:3.01:0,3,96	./.	0/0:14,0:12:19.79:0,20,130	0/0:1,0:1:3.01:0,3,96	0/0:1,0:1:2.96:0,3,19	0/0:1,0:1:3.01:0,3,94	0/0:1,0:1:3.01:0,3,100	0/0:1,0:1:0.47:0,0,1	./.	./.	1/1:11,0:11:3.01:140,3,0	0/0:27,0:26:60.68:0,61,3537	0/1:7,6:13:73.01:170,0,73	0/0:3,0:3:9.03:0,9,353	./.	0/0:1,0:1:3.01:0,3,96	./.	./.	0/0:2,0:1:3.01:0,3,96	0/0:2,0:2:6.02:0,6,200	0/0:2,0:2:0.89:0,1,2	0/0:2,0:2:6.02:0,6,185	0/0:5,0:4:4.36:0,4,10
chr10	98790063	.	TACAC	T	487.57	PASS	AB=1.000;AC=11;AF=0.220;AN=50;BaseQRankSum=1.826;DP=166;FS=12.901;HRun=0;HaplotypeScore=25.5961;InbreedingCoeff=0.4094;MQ=51.91;MQ0=9;MQRankSum=0.355;QD=7.39;ReadPosRankSum=2.206;VQSLOD=-0.2348;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:2,0:2:2.81:0,3,47	0/1:21,0:5:18.44:18,0,139	0/0:12,0:3:2.97:0,3,20	0/0:2,0:2:6.02:0,6,86	0/0:3,0:3:9.03:0,9,144	./.	1/1:9,8:15:24.06:368,24,0	0/0:1,0:1:3.01:0,3,48	0/0:6,0:6:15.04:0,15,237	0/0:3,0:3:3.01:0,3,46	0/0:5,0:5:15.05:0,15,243	0/0:2,0:2:2.79:0,3,48	0/0:1,0:1:3.01:0,3,48	0/0:2,0:2:6.02:0,6,96	1/1:11,0:11:3:28,3,0	0/0:27,0:26:50.86:0,51,911	1/1:10,0:10:3:27,3,0	0/0:4,0:4:9.03:0,9,146	0/0:6,0:6:12.04:0,12,192	0/0:3,0:3:9.03:0,9,144	0/0:1,0:1:3.01:0,3,48	./.	0/0:2,0:1:3.01:0,3,48	0/0:3,0:3:6.02:0,6,100	1/1:2,0:2:3.01:49,3,0	0/0:6,0:6:18.06:0,18,267	1/1:5,0:4:9.03:135,9,0
chr10	98791247	.	AAC	A	146.43	PASS	AB=0.931;AC=16;AF=0.333;AN=48;BaseQRankSum=3.919;DP=471;FS=1.166;HRun=0;HaplotypeScore=59.8072;InbreedingCoeff=-0.1400;MQ=68.61;MQ0=18;MQRankSum=-0.860;QD=0.65;ReadPosRankSum=0.991;VQSLOD=1.1993;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:4.79:0,5,26	./.	./.	./.	./.	0/1:18,0:18:12.97:13,0,113	0/0:14,0:14:3.01:0,3,44	0/0:26,0:26:0:0,0,0	0/0:9,0:9:6.91:0,7,90	0/0:14,0:14:2.97:0,3,20	0/0:6,0:6:12.04:0,12,166	0/0:15,0:14:15.05:0,15,216	0/0:15,0:14:9:0,9,109	0/1:12,1:13:25.79:26,0,34	0/1:17,0:17:19.82:20,0,82	0/0:13,0:13:5.99:0,6,50	0/0:18,0:18:23.98:0,24,280	1/1:14,0:12:2.92:17,3,0	0/0:12,0:11:3:0,3,27	1/1:14,0:15:2.83:14,3,0	0/1:23,1:23:22.87:23,0,76	0/1:21,0:23:0.23:0,0,72	0/1:9,3:12:19.93:20,0,97	0/1:21,1:23:27.98:28,0,151	0/1:13,1:14:13.90:14,0,159	0/1:24,2:27:31.68:65,0,32	0/1:17,1:17:25.85:26,0,38	1/1:5,0:6:2.84:14,3,0
chr10	98793794	.	G	GTAA	3138.89	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-8.117;DP=667;FS=0.944;HRun=0;HaplotypeScore=91.8054;InbreedingCoeff=0.9960;MQ=68.72;MQ0=3;MQRankSum=-0.861;QD=25.31;ReadPosRankSum=-2.323;VQSLOD=2.8970;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,41:47:33.31:1119,33,0	0/0:17,0:17:50.95:0,51,551	0/0:22,0:20:59.65:0,60,580	0/0:28,0:19:30.60:0,31,409	0/0:20,0:20:56.69:0,57,556	0/0:19,0:20:60.02:0,60,672	0/0:32,0:32:95.50:0,96,1033	1/1:22,0:22:62.85:553,63,0	0/0:22,0:23:66.05:0,66,804	0/0:22,0:22:59.72:0,60,576	0/0:11,0:11:30:0,30,325	0/0:27,0:27:81.05:0,81,971	0/0:24,0:26:78.02:0,78,930	0/0:22,0:22:63.04:0,63,765	0/0:25,0:29:76.06:0,76,999	0/0:12,0:19:44.99:0,45,407	0/0:30,0:30:86.97:0,87,1086	1/1:2,24:27:18.20:624,18,0	0/0:17,0:17:48.05:0,48,486	0/0:19,0:19:50.99:0,51,630	0/0:46,0:46:96.90:0,97,1340	0/0:21,0:21:59.99:0,60,629	0/0:22,0:23:68.19:0,68,657	0/0:34,0:34:98.62:0,99,1126	0/0:16,0:16:45.01:0,45,487	1/1:1,18:20:45.18:824,45,0	0/0:19,0:19:53.33:0,53,784	1/1:8,0:8:18:193,18,0
chr10	98796874	.	T	TGTATGTAT	2412.24	PASS	AB=1.000;AC=28;AF=0.560;AN=50;BaseQRankSum=2.792;DP=471;FS=5.295;HRun=0;HaplotypeScore=123.4663;InbreedingCoeff=0.7288;MQ=55.25;MQ0=13;MQRankSum=-0.547;QD=9.00;ReadPosRankSum=2.837;VQSLOD=2.1669;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:11.67:0,12,361	./.	./.	./.	1/1:24,0:24:32.92:268,33,0	1/1:17,0:17:20.95:171,21,0	0/0:9,0:9:9.03:0,9,222	0/0:24,0:21:0.94:0,1,2	0/1:9,0:9:53.08:125,0,53	0/0:18,0:18:24.13:0,24,589	0/0:13,0:13:33.10:0,33,761	0/0:12,0:12:30.09:0,30,685	1/1:6,0:6:5.87:39,6,0	1/1:7,0:7:8.98:73,9,0	1/1:14,0:14:9.03:337,9,0	0/0:12,0:12:18.06:0,18,329	1/1:37,0:37:35.92:292,36,0	1/1:25,4:30:9.03:356,9,0	1/1:20,0:17:9:99,9,0	1/1:11,0:10:14.91:115,15,0	1/1:26,0:26:17.96:146,18,0	0/1:10,0:10:54.10:54,0,62	1/1:15,0:15:17.99:234,18,0	1/1:20,0:20:11.92:91,12,0	0/0:20,0:20:27.09:0,27,667	0/0:19,0:19:30.05:0,30,439	1/1:22,0:22:26.54:205,27,0	0/0:14,0:14:18.06:0,18,334
chr10	98798657	.	T	TA	2929.89	PASS	AB=0.758;AC=12;AF=0.214;AN=56;BaseQRankSum=-11.353;DP=648;FS=16.456;HRun=10;HaplotypeScore=66.7630;InbreedingCoeff=0.7811;MQ=82.11;MQ0=0;MQRankSum=0.177;QD=19.15;ReadPosRankSum=-0.034;VQSLOD=2.7844;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:84.21:896,84,0	0/0:11,0:11:32.96:0,33,271	0/0:28,0:27:13.16:0,13,285	0/1:21,1:21:23.01:23,0,207	0/0:35,0:35:82.86:0,83,661	0/0:16,0:16:41.93:0,42,341	0/0:13,0:13:38.91:0,39,313	0/1:7,24:33:11.55:654,0,12	0/0:23,0:23:56.81:0,57,455	0/0:39,0:39:74.85:0,75,615	0/0:24,0:26:63.97:0,64,501	0/0:23,0:23:50.90:0,51,415	0/0:22,0:22:59.92:0,60,490	0/0:21,0:21:50.92:0,51,416	0/0:20,0:20:53.88:0,54,432	1/1:3,17:20:35.96:384,36,0	0/0:21,0:21:56.90:0,57,467	1/1:1,17:18:42.11:448,42,0	0/0:22,0:22:41.85:0,42,337	0/0:26,0:27:29.02:0,29,435	0/0:11,0:11:32.95:0,33,269	0/0:32,0:32:80.79:0,81,657	0/0:26,0:26:68.65:0,69,554	0/0:14,1:15:9.96:0,10,288	0/0:36,0:36:95.75:0,96,782	1/1:2,17:19:29.49:515,29,0	0/0:27,0:27:56.90:0,57,464	1/1:2,6:8:18.05:192,18,0
chr10	98799253	.	ACGCACGCGCGCG	A	1654.51	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=9.035;DP=525;FS=9.000;HRun=0;HaplotypeScore=195.5223;InbreedingCoeff=0.1326;MQ=75.43;MQ0=3;MQRankSum=-7.808;QD=13.13;ReadPosRankSum=0.895;VQSLOD=1.6036;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:25:10.76:165,0,11	0/0:11,0:11:27.08:0,27,1199	0/1:34,0:31:99:111,0,429	0/0:11,0:10:12.90:0,13,288	0/0:11,0:11:30.08:0,30,1251	0/0:13,0:13:10.44:0,10,2014	0/0:27,0:27:77.83:0,78,3408	0/1:14,0:13:99:306,0,136	0/0:14,0:14:39.12:0,39,1804	0/0:22,0:21:58.07:0,58,2678	0/0:12,0:12:24.07:0,24,977	0/0:23,0:23:54.16:0,54,2497	0/0:14,0:14:36.06:0,36,1279	0/0:20,0:20:57.18:0,57,2712	0/0:12,0:12:30.09:0,30,1409	1/1:4,10:14:14.52:450,15,0	0/0:42,0:42:99:0,114,5755	0/1:11,0:11:18.92:270,0,19	0/0:19,0:19:48.09:0,48,1564	0/0:14,0:14:42.13:0,42,1783	0/0:35,0:34:81.25:0,81,3891	0/0:19,0:19:45.12:0,45,1918	0/0:15,0:15:39.09:0,39,1671	0/0:35,0:34:93.32:0,93,5051	0/0:23,0:23:53.90:0,54,2518	0/1:22,0:21:99:480,0,186	0/0:7,0:7:15.03:0,15,687	0/1:3,0:3:11.19:11,0,85
chr10	98799257	.	ACGCGCGCGCGCGCG	A	2520.03	PASS	AB=0.863;AC=12;AF=0.214;AN=56;BaseQRankSum=9.289;DP=514;FS=25.007;HRun=0;HaplotypeScore=206.0196;InbreedingCoeff=0.4453;MQ=71.78;MQ0=4;MQRankSum=-7.690;QD=18.00;ReadPosRankSum=-0.479;VQSLOD=1.2341;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,5:23:12.51:307,13,0	0/0:11,0:11:27.08:0,27,1297	0/1:23,4:26:99:334,0,298	0/1:11,0:10:0.47:0,0,251	0/0:15,0:15:42.12:0,42,1916	0/1:13,0:13:6:6,0,2231	0/0:29,0:29:84.03:0,84,3944	1/1:9,6:13:17.84:546,18,0	0/0:15,0:15:39.12:0,39,2090	0/0:21,0:20:58.08:0,58,3273	0/0:14,0:14:30.09:0,30,1468	0/0:19,1:20:51.16:0,51,2775	0/0:11,0:11:32.97:0,33,1354	0/0:21,0:21:60.21:0,60,3282	0/0:13,0:13:30.10:0,30,1697	0/1:13,0:13:2.61:353,0,3	0/0:40,0:40:99:0,111,6200	1/1:3,1:11:15.05:388,15,0	0/0:16,0:16:42.13:0,42,1847	0/0:14,0:14:39.13:0,39,1940	0/0:35,0:34:87.28:0,87,4565	0/0:19,0:19:42.10:0,42,2074	0/0:15,0:15:36.12:0,36,2036	0/0:36,0:35:93.32:0,93,5498	0/0:22,0:22:53.84:0,54,2981	0/1:12,4:17:78.19:696,0,78	0/0:7,0:7:15.05:0,15,877	0/1:1,0:3:49.31:49,0,62
chr10	98800326	.	T	TCTC	6090.05	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.805;DP=684;FS=11.689;HRun=0;HaplotypeScore=125.1091;InbreedingCoeff=0.9773;MQ=83.52;MQ0=1;MQRankSum=-14.393;QD=51.18;ReadPosRankSum=1.499;VQSLOD=6.6689;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:36:54.13:1271,54,0	0/0:7,0:7:21.07:0,21,392	0/0:34,0:34:99:0,99,1696	0/0:25,0:25:68.97:0,69,1213	0/0:37,0:37:99:0,111,2064	0/0:30,0:30:90.31:0,90,1666	0/0:30,0:30:84.27:0,84,1503	1/1:1,28:30:87.22:1928,87,0	0/0:22,0:22:66.23:0,66,1221	0/0:26,0:26:78.25:0,78,1420	0/0:28,0:28:81.28:0,81,1510	0/0:31,0:31:78.25:0,78,1413	0/0:15,0:15:45.15:0,45,832	0/0:20,0:20:60.19:0,60,1086	0/0:23,0:23:69.24:0,69,1274	1/1:0,14:15:36.12:844,36,0	0/0:40,0:40:99:0,120,2205	1/1:0,9:9:24.08:535,24,0	0/0:27,0:27:63.22:0,63,1175	0/0:21,0:21:63.22:0,63,1166	0/0:29,0:29:87.26:0,87,1586	0/0:21,0:21:63.20:0,63,1130	0/0:25,0:25:75.26:0,75,1397	0/0:29,0:29:81.26:0,81,1469	0/0:27,0:27:78.25:0,78,1420	1/1:1,21:24:63.11:1370,63,0	0/0:18,0:18:54.19:0,54,1003	1/1:0,4:4:6.02:142,6,0
chr10	98801055	.	C	CA	555.89	PASS	AB=0.953;AC=12;AF=0.214;AN=56;BaseQRankSum=3.266;DP=565;FS=0.613;HRun=15;HaplotypeScore=78.4004;InbreedingCoeff=0.3577;MQ=67.32;MQ0=3;MQRankSum=-0.490;QD=2.99;ReadPosRankSum=-1.626;VQSLOD=-0.2350;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,26:42:28.49:292,28,0	0/0:13,0:14:24.86:0,25,140	0/0:22,1:11:5.96:0,6,36	0/1:14,0:8:0:1,0,0	0/0:20,2:24:22.07:0,22,224	0/0:17,0:18:30.15:0,30,166	0/0:26,0:27:14.01:0,14,118	0/1:22,0:23:11.48:11,0,87	0/0:12,0:12:16.12:0,16,94	0/0:15,1:17:3.13:0,3,121	0/1:17,2:19:46.65:47,0,136	0/0:21,0:21:27.24:0,27,148	0/0:15,0:16:14.01:0,14,68	0/1:24,0:24:12.11:12,0,44	0/0:24,0:24:35.59:0,36,184	1/1:16,3:19:12.53:186,13,0	0/0:33,0:34:21.90:0,22,201	1/1:14,1:16:8.68:124,9,0	0/1:13,0:15:0.35:0,0,83	0/0:22,0:23:37.91:0,38,232	0/0:16,0:16:25.17:0,25,149	0/0:13,0:13:8.58:0,9,54	0/0:22,0:22:2.59:0,3,142	0/0:15,0:13:16.41:0,16,88	0/0:26,0:26:20.54:0,21,196	0/0:18,0:18:21.38:0,21,129	0/0:13,0:14:6.04:0,6,101	0/1:10,2:12:32.90:33,0,53
chr10	98801478	.	ACATAGAGG	A	4322.79	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.812;DP=725;FS=10.968;HRun=0;HaplotypeScore=180.2231;InbreedingCoeff=0.9993;MQ=80.17;MQ0=0;MQRankSum=-10.941;QD=73.27;ReadPosRankSum=0.583;VQSLOD=4.4520;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,5861	0/0:15,0:15:42.13:0,42,1781	0/0:22,0:22:60.21:0,60,2321	0/0:23,0:23:63.22:0,63,2456	0/0:32,0:32:90.31:0,90,3992	0/0:16,0:16:48.16:0,48,2067	0/0:23,0:23:69.24:0,69,3033	1/1:2,17:19:51.18:1493,51,0	0/0:20,0:20:60.21:0,60,2712	0/0:36,0:36:99:0,108,4660	0/0:19,0:19:51.17:0,51,2227	0/0:32,0:32:96.30:0,96,3957	0/0:25,0:25:69.24:0,69,3035	0/0:20,0:20:57.18:0,57,2405	0/0:39,0:39:99:0,117,5124	0/0:23,0:23:69.22:0,69,3015	0/0:33,0:33:96.33:0,96,4289	0/0:27,0:27:78.27:0,78,3490	0/0:30,0:30:84.29:0,84,3511	0/0:20,0:20:60.21:0,60,2641	0/0:41,0:41:99:0,123,5472	0/0:26,0:26:78.27:0,78,3337	0/0:22,0:22:63.22:0,63,2818	0/0:17,0:17:51.18:0,51,2219	0/0:23,0:23:69.24:0,69,2898	1/1:3,26:29:54.25:2128,54,0	0/0:37,0:36:99:0,111,4945	1/1:3,8:11:24.08:702,24,0
chr10	98802424	.	TC	T	517.12	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.340;DP=690;FS=4.912;HRun=4;HaplotypeScore=68.3402;InbreedingCoeff=0.9986;MQ=77.22;MQ0=0;MQRankSum=-0.670;QD=22.48;ReadPosRankSum=1.078;VQSLOD=2.7537;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,138,1910	0/0:10,0:10:30.10:0,30,420	0/0:12,0:12:36.09:0,36,450	0/0:17,0:17:45.13:0,45,571	0/0:13,0:13:39.12:0,39,528	1/1:4,19:23:51.16:612,51,0	0/0:29,0:29:84.28:0,84,1174	0/0:30,0:30:81.25:0,81,1089	0/0:32,0:32:93.31:0,93,1288	0/0:17,0:17:48.15:0,48,657	0/0:12,0:12:36.12:0,36,504	0/0:29,0:29:81.24:0,81,1112	0/0:26,0:26:75.25:0,75,1048	0/0:28,0:28:81.27:0,81,1129	0/0:24,0:24:72.23:0,72,991	0/0:27,0:27:81.26:0,81,1111	0/0:37,0:37:99:0,105,1469	0/0:30,0:30:84.28:0,84,1172	0/0:30,0:30:84.25:0,84,1138	0/0:21,0:21:57.18:0,57,779	0/0:57,0:57:99:0,166,2295	0/0:19,0:19:57.12:0,57,742	0/0:20,0:20:57.17:0,57,758	0/0:34,0:34:99:0,102,1428	0/0:19,0:19:57.18:0,57,781	0/0:18,0:18:51.17:0,51,713	0/0:16,0:16:46.97:0,47,633	0/0:10,0:10:30.10:0,30,420
chr10	98803317	.	G	GA	1544.19	PASS	AB=0.909;AC=5;AF=0.089;AN=56;BaseQRankSum=-9.325;DP=485;FS=1.930;HRun=6;HaplotypeScore=48.6092;InbreedingCoeff=0.7477;MQ=72.62;MQ0=0;MQRankSum=-0.634;QD=24.13;ReadPosRankSum=-0.871;VQSLOD=2.6472;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:28:72.23:906,72,0	0/0:9,0:9:21.03:0,21,207	0/1:9,1:10:11.51:12,0,92	0/0:5,0:5:5.85:0,6,45	0/0:19,0:19:48.11:0,48,490	0/0:24,0:24:66.13:0,66,665	0/0:10,0:10:30.07:0,30,306	0/0:28,0:28:75.15:0,75,760	0/0:13,0:13:36.08:0,36,367	0/0:22,0:22:57.13:0,57,582	0/0:18,0:18:48.09:0,48,481	0/0:17,0:17:48.11:0,48,490	0/0:14,0:14:42.10:0,42,429	0/0:13,0:13:39.09:0,39,398	0/0:22,0:22:54.12:0,54,551	0/0:9,0:9:18.04:0,18,184	0/0:21,1:21:25.41:0,25,575	1/1:4,22:26:60.19:755,60,0	0/0:21,0:21:48.11:0,48,490	0/0:22,0:22:54.12:0,54,551	0/0:14,0:14:36.04:0,36,351	0/0:6,0:6:18.04:0,18,184	0/0:20,0:20:51.11:0,51,520	0/0:8,0:8:24.05:0,24,245	0/0:15,0:15:42.08:0,42,423	0/0:23,0:23:69.16:0,69,704	0/0:22,0:22:63.14:0,63,642	0/0:25,0:25:66.06:0,66,647
chr10	98807344	.	G	GGAGGAA	3149.08	PASS	AB=0.684;AC=6;AF=0.107;AN=56;BaseQRankSum=-6.739;DP=874;FS=3.659;HRun=0;HaplotypeScore=177.7912;InbreedingCoeff=0.5750;MQ=54.87;MQ0=34;MQRankSum=-8.128;QD=31.49;ReadPosRankSum=-1.125;VQSLOD=3.4223;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:66.26:0,66,1787	0/0:12,0:11:27.08:0,27,497	0/0:36,0:8:14.26:0,14,256	0/0:54,0:15:12.04:0,12,209	0/0:21,0:21:51.16:0,51,985	0/0:26,0:26:51.97:0,52,1209	0/0:49,0:49:99:0,99,1839	1/1:29,0:25:21.06:331,21,0	0/0:25,0:25:61.04:0,61,1322	0/0:41,0:41:99:0,102,2010	0/0:21,0:21:45.14:0,45,875	0/0:37,0:37:99:0,99,1992	0/0:20,0:20:42.14:0,42,857	0/0:36,0:36:72.20:0,72,1342	0/0:28,0:27:69.23:0,69,1408	0/1:7,30:37:6.72:1735,0,7	0/0:41,0:41:84.97:0,85,1815	0/0:28,0:27:69.19:0,69,1295	0/0:27,0:20:39.11:0,39,731	0/0:30,0:30:54.06:0,54,1027	0/0:39,0:37:81.14:0,81,1413	0/0:34,0:34:84.28:0,84,1672	0/0:26,0:26:54.17:0,54,1015	0/0:48,0:48:76.10:0,76,1738	0/0:23,0:23:60.18:0,60,1167	0/1:21,6:25:21.77:1108,0,22	0/0:28,0:26:60.14:0,60,1194	1/1:5,1:6:3.01:100,3,0
chr10	98807550	.	AGAAGAG	A	834.99	PASS	AB=0.984;AC=12;AF=0.214;AN=56;BaseQRankSum=7.186;DP=1376;FS=16.089;HRun=0;HaplotypeScore=310.8241;InbreedingCoeff=-0.0530;MQ=43.46;MQ0=28;MQRankSum=-3.399;QD=1.93;ReadPosRankSum=-8.194;VQSLOD=-0.0590;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:21:25.89:0,26,1129	0/1:29,0:29:21.03:21,0,1775	0/1:35,2:9:1.97:2,0,285	0/0:39,0:16:20.87:0,21,530	0/0:50,5:54:99:0,102,2791	0/0:42,0:41:48.55:0,49,2973	0/0:71,0:65:99:0,139,4391	1/1:6,11:11:24.01:324,24,0	0/1:58,0:53:55.16:55,0,2212	0/1:108,0:91:44.94:45,0,5648	0/1:43,0:43:13.44:13,0,2917	0/0:75,0:67:5.61:0,6,3900	0/0:56,0:51:18.83:0,19,2501	0/0:69,0:62:99:0,114,3541	0/0:76,0:70:99:0,127,3835	0/1:21,1:22:99:295,0,151	0/0:65,0:58:48.47:0,48,3775	0/0:33,0:32:28.63:0,29,1431	0/1:40,0:29:79.02:79,0,1500	0/0:47,0:47:37.01:0,37,2898	0/0:74,0:71:39.51:0,40,3865	0/0:58,0:58:97.24:0,97,3616	0/0:33,0:32:50.09:0,50,1671	0/0:74,0:71:16.21:0,16,4394	0/1:58,0:58:16.29:16,0,3361	0/1:12,1:13:61.22:86,0,61	0/0:51,0:49:28.84:0,29,2829	0/1:7,0:7:50.89:51,0,55
chr10	98807608	.	GGAA	G	2422.01	PASS	AB=0.944;AC=25;AF=0.446;AN=56;BaseQRankSum=12.058;DP=1132;FS=21.972;HRun=0;HaplotypeScore=356.2545;InbreedingCoeff=-0.3995;MQ=40.12;MQ0=35;MQRankSum=-12.379;QD=2.84;ReadPosRankSum=0.448;VQSLOD=0.8501;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,8:14:30.46:414,30,0	0/1:23,0:21:0.93:1,0,694	0/0:31,0:5:9.03:0,9,176	0/0:35,0:10:18.01:0,18,314	0/1:35,2:36:99:169,0,980	0/1:34,3:35:99:160,0,790	0/0:50,2:47:30.43:0,30,1525	1/1:15,0:2:2.50:9,2,0	0/1:49,2:48:99:121,0,1124	0/1:84,4:78:49.72:50,0,2106	0/1:36,1:36:29.51:30,0,1371	0/1:52,4:50:99:187,0,1258	0/1:50,3:47:99:135,0,1133	0/1:60,3:55:39.86:40,0,1704	0/1:66,3:60:99:129,0,1418	0/1:25,3:28:99:260,0,109	0/0:41,1:36:3.86:0,4,1344	0/1:15,5:20:20.55:337,0,21	0/1:26,1:19:68.82:69,0,374	0/1:30,0:29:14.67:15,0,1227	0/0:60,2:60:7.46:0,7,2024	0/1:42,2:42:99:143,0,1387	0/1:26,3:27:65.90:66,0,784	0/0:54,1:53:10.44:0,10,1468	0/1:53,2:54:4.84:5,0,1701	0/1:14,1:14:99:110,0,183	0/1:48,1:48:12.57:13,0,1195	1/1:6,2:8:12.01:123,12,0
chr10	98807611	.	A	AGAG	4485.31	PASS	AB=0.965;AC=27;AF=0.482;AN=56;BaseQRankSum=13.986;DP=1110;FS=40.464;HRun=0;HaplotypeScore=380.7355;InbreedingCoeff=-0.6706;MQ=39.71;MQ0=36;MQRankSum=-13.473;QD=4.49;ReadPosRankSum=-3.115;VQSLOD=2.0920;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:14:31.34:127,0,31	0/1:21,0:19:7.87:8,0,531	0/0:32,0:5:9.03:0,9,146	0/0:29,0:8:18.04:0,18,271	0/1:37,0:36:99:267,0,772	0/1:33,1:32:99:238,0,596	0/0:50,0:46:28.23:0,28,1230	1/1:12,0:1:2.68:11,3,0	0/1:49,3:49:99:235,0,784	0/1:85,1:75:99:363,0,1581	0/1:37,0:37:68.94:69,0,1050	0/1:58,1:52:99:283,0,920	0/1:52,0:45:99:128,0,855	0/1:62,1:55:99:200,0,1251	0/1:73,1:63:99:299,0,1038	0/1:22,6:28:74:712,0,74	0/1:41,1:35:46.47:46,0,1051	0/1:17,0:19:15.15:216,0,15	0/1:26,0:20:99:160,0,253	0/1:31,0:30:42.09:42,0,982	0/1:59,0:57:99:109,0,1499	0/1:42,1:41:99:240,0,1058	0/1:25,0:24:99:108,0,584	0/1:56,0:53:15.07:15,0,1106	0/1:51,3:53:99:135,0,1291	0/1:12,3:14:99:229,0,108	0/1:43,2:43:77.84:78,0,970	1/1:6,1:7:11.91:166,12,0
chr10	98807612	.	G	GAGA	2821.37	PASS	AB=0.989;AC=25;AF=0.446;AN=56;BaseQRankSum=14.625;DP=1104;FS=38.370;HRun=0;HaplotypeScore=383.6770;InbreedingCoeff=-0.5640;MQ=39.65;MQ0=36;MQRankSum=-13.702;QD=3.03;ReadPosRankSum=-2.127;VQSLOD=1.0539;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:14:64.28:64,0,83	0/0:21,0:19:30.01:0,30,620	0/0:31,0:5:9.03:0,9,158	0/0:29,0:8:17.99:0,18,270	0/1:37,0:36:99:181,0,808	0/1:34,0:32:99:191,0,657	0/0:50,0:45:37.17:0,37,1420	1/1:12,0:1:2.97:20,3,0	0/1:50,2:49:99:218,0,980	0/1:86,2:75:99:311,0,1875	0/1:37,0:36:32.78:33,0,1148	0/1:58,0:50:99:192,0,1174	0/1:51,0:45:54.62:55,0,1102	0/1:62,0:54:99:133,0,1461	0/1:74,0:63:99:133,0,1316	0/1:27,1:28:99:602,0,158	0/0:41,0:35:17.66:0,18,1172	0/1:18,1:19:63.62:176,0,64	0/1:26,1:21:99:147,0,351	0/1:30,0:30:25.83:26,0,1089	0/1:59,0:57:11.22:11,0,1695	0/1:43,0:41:83.05:83,0,1138	0/1:26,0:24:59.41:59,0,618	0/1:52,2:52:14.46:14,0,1243	0/1:54,0:53:63.03:63,0,1556	0/1:15,0:14:99:137,0,235	0/1:44,0:42:39.12:39,0,1110	1/1:7,0:7:6.45:92,6,0
chr10	98807616	.	A	AAG	2702.45	PASS	AB=0.936;AC=22;AF=0.407;AN=54;BaseQRankSum=13.171;DP=1044;FS=21.174;HRun=0;HaplotypeScore=374.2895;InbreedingCoeff=-0.6716;MQ=39.50;MQ0=31;MQRankSum=-12.808;QD=3.00;ReadPosRankSum=1.386;VQSLOD=1.0417;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,1:13:78.77:79,0,161	0/0:15,4:17:34.20:0,34,542	0/0:25,0:4:8.99:0,9,118	0/0:26,0:8:18.01:0,18,243	0/1:28,1:28:99:128,0,724	0/1:30,1:30:99:260,0,613	0/0:46,1:43:35.21:0,35,1303	./.	0/1:48,2:50:99:218,0,993	0/1:78,3:70:99:276,0,1703	0/1:34,0:33:32.35:32,0,1021	0/1:54,2:50:99:236,0,1095	0/1:49,4:46:99:169,0,994	0/1:54,5:51:99:191,0,1326	0/1:65,3:58:99:166,0,1287	0/1:29,0:29:99:127,0,232	0/1:35,4:34:40:40,0,1134	0/1:11,8:19:99:212,0,116	0/1:25,3:21:89.92:90,0,427	0/1:25,0:24:4.86:5,0,987	0/1:51,5:54:42.04:42,0,1602	0/1:38,0:37:99:130,0,1053	0/1:25,0:24:99:107,0,597	0/1:51,2:49:8.81:9,0,1171	0/1:48,0:50:99:123,0,1425	0/0:15,0:14:24.38:0,24,270	0/1:41,1:42:99:107,0,1018	0/1:3,4:7:14.18:110,0,14
chr10	98807631	.	AAG	A	128.47	PASS	AB=0.911;AC=5;AF=0.093;AN=54;BaseQRankSum=10.828;DP=960;FS=54.583;HRun=0;HaplotypeScore=368.9187;InbreedingCoeff=0.0054;MQ=38.32;MQ0=46;MQRankSum=-9.947;QD=0.91;ReadPosRankSum=-1.175;VQSLOD=0.4720;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:12:19.18:0,19,409	0/0:12,0:11:31.33:0,31,538	0/0:26,0:2:6.01:0,6,86	0/0:29,0:5:9.03:0,9,182	0/0:28,0:26:8.74:0,9,786	0/1:29,2:29:27.86:28,0,702	0/0:40,2:40:29.72:0,30,1662	./.	0/1:47,2:45:85.96:86,0,1412	0/0:77,0:67:84.35:0,84,2588	0/0:28,1:28:49.85:0,50,1248	0/0:49,3:46:19.50:0,19,1781	0/0:50,1:45:48.54:0,49,1446	0/0:49,2:43:10.80:0,11,1693	0/0:59,1:52:70.90:0,71,1933	0/0:28,0:28:16.40:0,16,543	0/1:33,2:31:27.53:28,0,1129	0/0:13,0:13:35.57:0,36,496	0/0:31,0:21:53.35:0,53,788	0/0:24,0:23:47.12:0,47,1203	0/0:56,1:55:5:0,5,1964	0/0:32,0:30:21.73:0,22,1380	0/1:22,1:22:63.05:63,0,640	0/0:43,1:41:19.53:0,20,1338	0/0:45,0:44:32.60:0,33,1863	0/0:13,0:12:12.51:0,13,397	0/0:41,0:39:41.43:0,41,1385	0/1:2,1:3:2.22:40,0,2
chr10	98807633	.	G	GA	1101.05	PASS	AB=0.915;AC=17;AF=0.315;AN=54;BaseQRankSum=9.581;DP=946;FS=63.483;HRun=2;HaplotypeScore=347.3252;InbreedingCoeff=-0.3537;MQ=36.99;MQ0=50;MQRankSum=-9.275;QD=2.04;ReadPosRankSum=-1.826;VQSLOD=-0.7551;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:12:9.07:9,0,263	0/0:10,1:11:5.16:0,5,342	0/0:27,0:1:3.01:0,3,42	0/0:31,0:4:9.03:0,9,122	0/1:22,2:24:58.44:58,0,492	0/1:27,2:27:99:102,0,398	0/0:41,1:39:33.73:0,34,1141	./.	0/1:44,5:45:99:152,0,1006	0/1:67,2:66:51.95:52,0,1745	0/1:26,1:28:20.91:21,0,837	0/0:50,2:45:5.78:0,6,1312	0/1:46,3:43:2:2,0,1008	0/1:47,2:41:8.28:8,0,1188	0/0:57,2:49:6.36:0,6,1307	0/1:20,8:28:99:329,0,393	0/1:31,2:29:27.98:28,0,786	0/0:13,0:13:21.11:0,21,355	0/0:30,0:20:0.71:0,1,517	0/0:23,0:23:21.32:0,21,830	0/0:55,0:53:29.34:0,29,1338	0/1:30,3:31:52.98:53,0,992	0/1:20,3:23:99:128,0,490	0/0:42,1:40:46.56:0,47,959	0/1:39,4:44:88.68:89,0,1245	0/1:10,3:12:99:111,0,248	0/1:36,3:38:26.02:26,0,871	1/1:1,2:3:6.02:83,6,0
chr10	98807641	.	GA	G	1623.45	PASS	AB=0.773;AC=18;AF=0.360;AN=50;BaseQRankSum=8.625;DP=891;FS=139.166;HRun=2;HaplotypeScore=347.1769;InbreedingCoeff=-0.5781;MQ=36.04;MQ0=51;MQRankSum=-13.691;QD=2.46;ReadPosRankSum=2.681;VQSLOD=0.1392;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,6:9:26.56:75,0,27	0/0:13,0:12:35.59:0,36,458	./.	./.	0/0:23,0:20:29.38:0,29,533	0/1:24,2:24:6.55:7,0,287	0/1:26,11:35:99:106,0,634	./.	0/1:32,15:43:99:150,0,431	0/1:48,20:59:99:189,0,984	0/0:27,3:29:9.70:0,10,629	0/1:35,17:45:99:169,0,503	0/1:33,13:40:99:147,0,500	0/1:33,13:38:99:114,0,670	0/1:32,22:44:99:278,0,345	0/1:18,9:27:77.09:77,0,303	0/0:28,3:27:13.68:0,14,671	0/1:6,7:13:56.63:57,0,58	0/1:18,12:18:87.57:170,0,88	0/1:21,3:23:7.08:7,0,669	0/1:35,13:47:38.65:39,0,888	0/0:31,5:34:6.20:0,6,875	0/0:21,2:23:15.81:0,16,428	0/1:31,7:35:29.21:29,0,678	0/1:34,11:44:38.61:39,0,789	0/1:9,4:12:47.88:48,0,138	0/1:25,9:32:69.23:69,0,472	0/0:3,0:3:2.90:0,3,16
chr10	98807644	.	GAA	G	4501.26	PASS	AB=0.791;AC=24;AF=0.480;AN=50;BaseQRankSum=11.561;DP=867;FS=166.746;HRun=2;HaplotypeScore=341.9304;InbreedingCoeff=-0.7959;MQ=35.65;MQ0=54;MQRankSum=-14.466;QD=5.97;ReadPosRankSum=1.260;VQSLOD=0.9681;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,6:9:39.53:140,0,40	0/0:13,0:12:34.14:0,34,606	./.	./.	0/0:24,0:21:24.84:0,25,684	0/1:22,2:23:78:78,0,382	0/1:25,11:34:99:195,0,786	./.	0/1:29,15:40:99:382,0,393	0/1:46,20:56:99:394,0,1253	0/1:26,3:28:38.36:38,0,750	0/1:32,17:42:99:382,0,707	0/1:31,13:38:99:296,0,521	0/1:32,13:37:99:239,0,893	0/1:31,22:43:99:490,0,395	0/1:17,9:26:99:242,0,102	0/1:25,3:25:67.84:68,0,838	0/1:7,7:14:99:136,0,110	0/1:17,12:18:75.55:284,0,76	0/1:21,3:23:39.40:39,0,928	0/1:33,13:45:99:113,0,1102	0/1:31,5:34:99:120,0,1091	0/1:21,2:23:67.87:68,0,427	0/1:29,7:33:77.70:78,0,967	0/1:31,11:41:99:325,0,886	0/1:8,4:11:99:182,0,156	0/1:23,10:31:99:208,0,611	1/1:3,0:3:1.25:3,1,0
chr10	98807693	.	G	GA	710.49	PASS	AC=36;AF=1.000;AN=36;DP=93;FS=0.000;HRun=0;HaplotypeScore=40.8299;InbreedingCoeff=0.0652;MQ=29.08;MQ0=1;QD=8.07;VQSLOD=3.1201;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:1,1:2:0.47:1,0,0	./.	1/1:0,1:1:2.92:17,3,0	./.	1/1:2,6:5:8.84:57,9,0	1/1:2,5:5:14.59:85,15,0	1/1:1,2:3:8.82:59,9,0	1/1:3,5:7:14.65:87,15,0	1/1:0,4:1:2.92:17,3,0	1/1:1,6:2:2.92:17,3,0	1/1:1,11:4:8.77:52,9,0	./.	1/1:1,3:3:5.72:30,6,0	1/1:0,1:1:2.90:16,3,0	1/1:0,4:1:2.90:16,3,0	1/1:2,0:2:5.93:40,6,0	1/1:3,2:4:5.87:35,6,0	1/1:2,3:5:11.75:72,12,0	1/1:3,0:3:5.87:40,6,0	1/1:3,2:5:5.91:38,6,0	1/1:1,6:7:17.56:104,18,0	./.	./.	./.
chr10	98810326	.	CAG	C	588.02	PASS	AB=0.977;AC=11;AF=0.196;AN=56;BaseQRankSum=12.167;DP=760;FS=2.777;HRun=0;HaplotypeScore=127.5631;InbreedingCoeff=0.2462;MQ=64.00;MQ0=5;MQRankSum=-8.519;QD=2.24;ReadPosRankSum=1.241;VQSLOD=2.4543;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:23.48:152,23,0	0/0:10,0:10:21.07:0,21,341	0/1:49,2:33:43.86:44,0,302	0/1:36,1:20:12.52:13,0,290	0/0:25,0:25:72.23:0,72,1146	0/0:31,0:31:75.21:0,75,1196	0/0:30,0:30:75.24:0,75,1183	0/1:38,0:38:7.13:7,0,81	0/0:18,1:19:14.25:0,14,673	0/0:34,0:34:54.70:0,55,1199	0/0:21,0:21:54.18:0,54,867	0/0:31,1:32:53.36:0,53,1320	0/1:21,2:23:25.64:26,0,620	0/0:16,0:16:39.12:0,39,610	0/0:36,1:37:62.40:0,62,1500	0/1:22,0:22:59.66:60,0,65	0/0:23,0:23:51.14:0,51,780	1/1:19,0:19:38.07:238,38,0	0/0:15,1:16:2.20:0,2,541	0/0:30,0:30:32.29:0,32,985	0/0:43,0:43:99:0,112,1746	0/0:17,0:18:54.16:0,54,827	0/0:28,0:28:63.21:0,63,1019	0/0:27,1:28:34.99:0,35,1039	0/0:23,0:24:49.02:0,49,917	0/1:32,0:32:32.78:157,0,33	0/0:32,0:32:75.20:0,75,1154	0/1:9,0:9:3.41:50,0,3
chr10	98810336	.	GAGAGAGAAAGAGAGAGAA	G	4796.47	PASS	AB=0.725;AC=5;AF=0.089;AN=56;BaseQRankSum=9.163;DP=776;FS=2.296;HRun=0;HaplotypeScore=341.5100;InbreedingCoeff=0.7758;MQ=60.21;MQ0=12;MQRankSum=-4.588;QD=67.56;ReadPosRankSum=-2.455;VQSLOD=3.5201;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:30.57:0,31,1248	0/0:10,0:10:27.09:0,27,1783	0/0:53,0:22:39.09:0,39,716	0/0:56,0:20:42.77:0,43,1768	0/0:25,0:25:72.25:0,72,4878	0/0:30,0:30:81.24:0,81,5198	0/0:29,0:29:81.17:0,81,4435	1/1:5,30:35:88.46:1179,88,0	0/0:19,0:19:54.18:0,54,3746	0/0:30,0:30:84.29:0,84,5933	0/0:21,0:21:57.19:0,57,3877	0/0:32,0:32:93.31:0,93,6260	0/0:21,0:21:57.20:0,57,3572	0/0:17,0:17:45.15:0,45,2689	0/0:37,0:37:99:0,105,7021	0/0:22,0:21:44.28:0,44,553	0/0:24,0:24:54.18:0,54,3408	0/0:15,0:15:42.14:0,42,1989	0/0:19,0:19:54.19:0,54,2826	0/0:27,0:27:72.25:0,72,5149	0/0:46,0:46:99:0,102,8374	0/0:21,0:21:63.22:0,63,4008	0/0:27,0:27:66.21:0,66,4316	0/0:33,0:33:90.27:0,90,6344	0/0:26,0:26:75.26:0,75,5444	0/1:18,11:29:99:2728,0,138	0/0:32,0:32:81.27:0,81,5193	1/1:1,6:7:18.06:890,18,0
chr10	98810342	.	GAA	G	1776.88	PASS	AB=0.733;AC=11;AF=0.196;AN=56;BaseQRankSum=14.202;DP=781;FS=2.448;HRun=3;HaplotypeScore=121.9122;InbreedingCoeff=0.8834;MQ=58.64;MQ0=15;MQRankSum=-6.102;QD=13.36;ReadPosRankSum=0.864;VQSLOD=0.5647;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:29.80:375,30,0	0/0:11,0:11:33.07:0,33,481	0/0:57,0:19:2.01:0,2,277	0/0:70,0:23:29.93:0,30,494	0/0:25,0:25:75.23:0,75,1368	0/0:29,0:29:85.48:0,85,1436	0/0:28,0:28:84.24:0,84,1407	1/1:31,0:31:10.66:196,11,0	0/0:20,0:20:31.96:0,32,903	0/0:31,0:31:88.50:0,89,1544	0/0:19,0:19:57.17:0,57,1024	0/0:31,0:31:82.30:0,82,1545	0/0:20,0:20:17.86:0,18,852	0/0:16,0:16:45.13:0,45,747	0/0:38,0:38:99:0,102,1831	0/1:14,8:21:1.26:239,0,1	0/0:22,0:22:57.09:0,57,940	1/1:0,16:16:42.11:564,42,0	0/0:21,0:21:53.62:0,54,806	0/0:28,0:28:70.88:0,71,1298	0/0:44,0:44:99:0,105,2147	0/0:23,0:23:65.38:0,65,979	0/0:24,0:24:72.19:0,72,1201	0/0:32,0:32:60.15:0,60,1372	0/0:26,0:26:77.97:0,78,1311	1/1:21,6:27:52.36:481,52,0	0/0:31,0:31:87.21:0,87,1395	1/1:6,0:6:16.06:96,16,0
chr10	98810343	.	A	AG	819.30	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=7.479;DP=780;FS=0.652;HRun=1;HaplotypeScore=113.9058;InbreedingCoeff=0.5060;MQ=59.19;MQ0=14;MQRankSum=-3.000;QD=13.00;ReadPosRankSum=-2.255;VQSLOD=1.7636;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:23.72:0,24,98	0/0:12,0:12:33.10:0,33,439	0/0:57,0:18:44.94:0,45,474	0/0:73,0:24:44.05:0,44,549	0/0:25,0:25:75.25:0,75,1042	0/0:29,0:29:85.52:0,86,1148	0/0:29,0:29:79.73:0,80,1120	0/1:30,0:30:25.67:379,0,26	0/0:19,0:19:57.09:0,57,742	0/0:31,0:31:90.25:0,90,1202	0/0:20,0:20:57.18:0,57,779	0/0:31,0:31:91.98:0,92,1195	0/0:20,0:20:60.08:0,60,776	0/0:16,0:16:45.15:0,45,622	0/0:37,0:37:99:0,111,1517	0/0:22,0:21:23.96:0,24,154	0/0:21,0:21:57.19:0,57,787	0/0:16,0:16:31.71:0,32,105	0/0:22,0:22:63.14:0,63,823	0/0:28,0:28:81.22:0,81,1094	0/0:44,0:44:99:0,105,1679	0/0:23,0:23:62.85:0,63,897	0/0:24,0:24:72.22:0,72,970	0/0:32,0:32:90.09:0,90,1175	0/0:27,0:27:78.17:0,78,1034	1/1:22,5:27:3.96:525,4,0	0/0:29,0:29:87.27:0,87,1173	0/1:6,0:6:1.69:19,0,2
chr10	98810350	.	GAGAA	G	1075.19	PASS	AB=0.929;AC=9;AF=0.161;AN=56;BaseQRankSum=12.067;DP=839;FS=0.501;HRun=0;HaplotypeScore=161.2330;InbreedingCoeff=0.5786;MQ=57.73;MQ0=17;MQRankSum=-7.470;QD=7.26;ReadPosRankSum=-2.375;VQSLOD=2.0556;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:33:7.98:26,0,8	0/0:11,0:11:33.11:0,33,867	0/0:65,0:18:23.45:0,23,331	0/0:92,0:29:60.06:0,60,1008	0/0:27,0:27:78.26:0,78,1912	0/0:28,0:28:80.83:0,81,1945	0/0:28,0:28:72.01:0,72,1604	1/1:30,0:30:9.41:197,9,0	0/0:21,0:21:63.21:0,63,1496	0/0:34,0:34:89.37:0,89,2368	0/0:20,0:20:60.20:0,60,1507	0/0:32,0:32:93.28:0,93,2210	0/0:22,0:22:66.20:0,66,1480	0/0:18,0:18:51.14:0,51,1084	0/0:39,0:39:99:0,114,2630	0/1:14,6:21:9.89:326,0,10	0/0:22,0:22:57.04:0,57,1249	0/1:17,0:17:18.09:37,0,18	0/0:24,0:24:69.20:0,69,1519	0/0:30,0:30:81.04:0,81,1920	0/0:46,0:46:99:0,126,3064	0/0:22,0:22:60.19:0,60,1449	0/0:23,0:23:69.23:0,69,1691	0/0:32,0:32:70.53:0,71,2081	0/0:27,0:27:78.26:0,78,2039	1/1:33,0:33:4.10:431,4,0	0/0:27,0:27:81.26:0,81,1899	1/1:12,0:12:24.38:206,24,0
chr10	98810352	.	GAA	G	1815.57	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=14.361;DP=839;FS=0.000;HRun=3;HaplotypeScore=129.4731;InbreedingCoeff=0.8851;MQ=56.29;MQ0=19;MQRankSum=-5.690;QD=12.44;ReadPosRankSum=-1.454;VQSLOD=-0.0684;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,2:33:38.76:446,39,0	0/0:11,0:11:33.11:0,33,635	0/0:65,0:18:16.60:0,17,257	0/0:92,1:28:54.39:0,54,732	0/0:27,0:27:78.22:0,78,1348	0/0:28,0:28:83.86:0,84,1435	0/0:28,0:28:75:0,75,1208	1/1:30,0:30:35.21:251,35,0	0/0:21,0:21:63.13:0,63,1042	0/0:33,0:33:89.37:0,89,1717	0/0:20,0:20:60.19:0,60,1095	0/0:32,0:32:93.27:0,93,1613	0/0:22,0:22:64.71:0,65,1031	0/0:18,0:18:51.14:0,51,846	0/0:39,0:39:99:0,117,1921	0/1:21,0:20:21.87:236,0,22	0/0:21,0:21:57.02:0,57,920	1/1:16,1:17:43.67:564,44,0	0/0:23,0:23:69.13:0,69,1113	0/0:30,0:30:69.27:0,69,1397	0/0:46,0:46:99:0,126,2208	0/0:21,0:21:62.55:0,63,1065	0/0:23,0:23:69.20:0,69,1205	0/0:31,1:32:45.60:0,46,1498	0/0:28,0:28:81.27:0,81,1524	1/1:32,0:32:53.73:333,54,0	0/0:28,0:28:84.18:0,84,1390	1/1:12,0:12:27.98:164,28,0
chr10	98810375	.	G	GAGA	37.27	PASS	AB=0.600;AC=1;AF=0.018;AN=56;BaseQRankSum=5.355;DP=861;FS=1.078;HRun=0;HaplotypeScore=150.5877;InbreedingCoeff=-0.0183;MQ=61.32;MQ0=27;MQRankSum=-2.829;QD=1.38;ReadPosRankSum=-1.370;VQSLOD=2.5123;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:50.76:0,51,871	0/0:11,0:11:33.11:0,33,598	0/0:93,0:32:74.62:0,75,1174	0/0:113,0:35:62.75:0,63,955	0/0:25,0:25:75.23:0,75,1284	0/0:31,0:31:93.32:0,93,1620	0/0:19,0:19:57.20:0,57,1045	0/0:43,0:43:99:0,120,1972	0/0:19,0:19:54.18:0,54,943	0/0:28,0:28:81.28:0,81,1446	0/0:15,0:15:45.15:0,45,838	0/0:35,0:35:99:0,102,1736	0/0:22,0:22:66.23:0,66,1197	0/0:14,0:14:36.12:0,36,654	0/0:39,0:39:99:0,117,2096	0/1:9,11:26:99:112,0,115	0/0:16,0:16:27.14:0,27,711	0/0:16,0:16:45.15:0,45,783	0/0:18,0:18:54.18:0,54,958	0/0:28,0:28:81.28:0,81,1489	0/0:45,0:47:99:0,126,2219	0/0:22,0:22:63.22:0,63,1132	0/0:23,0:23:66.22:0,66,1150	0/0:33,0:33:55.11:0,55,1550	0/0:25,0:25:75.26:0,75,1381	0/0:29,0:29:61.75:0,62,1316	0/0:26,0:26:78.26:0,78,1374	0/0:14,0:14:28.96:0,29,563
chr10	98811091	.	G	GCC	9217.02	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-17.372;DP=780;FS=1.017;HRun=1;HaplotypeScore=89.2999;InbreedingCoeff=0.9998;MQ=80.56;MQ0=1;MQRankSum=-1.480;QD=52.97;ReadPosRankSum=-1.316;VQSLOD=4.3701;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,51:51:99:2603,135,0	0/0:10,0:10:30.10:0,30,459	0/0:26,0:26:78.23:0,78,1129	0/0:26,0:26:66.30:0,66,884	0/0:40,0:40:99:0,117,1745	0/0:14,0:14:42.13:0,42,622	0/0:29,0:29:84.24:0,84,1222	1/1:1,36:37:99:1971,108,0	0/0:21,0:21:63.21:0,63,961	0/0:36,0:36:99:0,102,1560	0/0:16,0:16:48.16:0,48,735	0/0:34,0:34:99:0,99,1516	0/0:29,0:29:87.30:0,87,1330	0/0:24,0:24:69.22:0,69,1033	0/0:32,0:32:96.33:0,96,1470	1/1:1,21:22:57.20:1101,57,0	0/0:42,0:42:99:0,123,1861	1/1:0,25:24:72.25:1390,72,0	0/0:10,0:10:30.09:0,30,438	0/0:36,0:36:99:0,102,1541	0/0:46,0:46:99:0,135,2002	0/0:20,0:20:60.20:0,60,919	0/0:32,0:32:90.29:0,90,1355	0/0:29,0:29:84.27:0,84,1264	0/0:23,0:23:69.23:0,69,1056	1/1:0,24:24:72.20:1319,72,0	0/0:31,0:30:93.32:0,93,1421	1/1:0,15:15:45.11:831,45,0
chr10	98811718	.	T	TAGG	1190.87	PASS	AB=0.834;AC=7;AF=0.125;AN=56;BaseQRankSum=7.275;DP=627;FS=5.658;HRun=0;HaplotypeScore=101.8989;InbreedingCoeff=0.4660;MQ=54.00;MQ0=5;MQRankSum=-6.590;QD=18.90;ReadPosRankSum=-1.920;VQSLOD=2.2687;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:29:60.06:0,60,811	0/0:9,0:9:27.08:0,27,450	0/1:12,0:7:13.04:13,0,141	0/0:5,0:3:8.39:0,8,114	0/0:22,0:21:57.19:0,57,978	0/0:29,0:27:81.26:0,81,1393	0/0:36,0:33:84.23:0,84,1430	1/1:7,1:4:9:131,9,0	0/0:25,0:24:63.22:0,63,1107	0/0:20,0:20:51.15:0,51,819	0/0:23,0:23:63.21:0,63,1071	0/0:28,0:28:78.27:0,78,1375	0/0:28,0:27:75.23:0,75,1261	0/0:24,0:24:69.22:0,69,1189	0/0:31,0:30:81.26:0,81,1393	0/0:16,0:14:33.10:0,33,424	0/0:37,0:36:99:0,108,1790	0/1:10,0:10:15.15:15,0,253	0/0:17,0:13:36.12:0,36,635	0/0:15,0:14:42.14:0,42,737	0/0:35,0:32:90.28:0,90,1531	0/0:16,0:16:48.16:0,48,841	0/0:23,0:23:66.23:0,66,1158	0/0:37,0:37:99:0,102,1734	0/0:24,0:24:69.23:0,69,1180	0/1:10,11:20:99:931,0,105	0/0:30,0:29:84.28:0,84,1431	1/1:6,4:10:12.02:233,12,0
chr10	98811730	.	T	TACCA	2828.97	PASS	AB=0.628;AC=7;AF=0.130;AN=54;BaseQRankSum=9.856;DP=637;FS=3.839;HRun=0;HaplotypeScore=110.4859;InbreedingCoeff=0.5428;MQ=55.28;MQ0=2;MQRankSum=-10.548;QD=32.89;ReadPosRankSum=-1.472;VQSLOD=3.1873;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,23:29:2.37:1028,0,2	0/0:8,0:8:21.07:0,21,374	0/0:25,0:15:36.12:0,36,634	0/0:11,0:8:24.08:0,24,420	0/0:19,0:18:45.14:0,45,772	0/0:31,0:29:75.23:0,75,1276	0/0:35,0:32:69.20:0,69,1149	1/1:4,2:4:6.02:122,6,0	0/0:26,0:25:72.23:0,72,1250	0/0:19,0:19:39.13:0,39,683	0/0:21,0:21:54.17:0,54,934	0/0:33,0:33:90.29:0,90,1573	0/0:30,0:29:78.27:0,78,1388	0/0:23,0:23:57.19:0,57,1015	0/0:30,0:29:78.27:0,78,1379	1/1:8,10:17:38.64:937,39,0	0/0:35,0:34:99:0,99,1702	0/1:6,5:9:94.71:143,0,95	0/0:17,0:14:36.11:0,36,607	0/0:16,0:15:33.10:0,33,558	0/0:40,0:37:96.33:0,96,1708	0/0:17,0:17:48.16:0,48,855	0/0:26,0:26:66.23:0,66,1166	0/0:35,0:35:96.33:0,96,1709	0/0:21,0:21:54.17:0,54,933	0/1:6,11:16:99:734,0,121	0/0:26,0:25:72.25:0,72,1282	./.
chr10	98812666	.	TA	T	416.26	PASS	AB=0.812;AC=6;AF=0.107;AN=56;BaseQRankSum=6.371;DP=558;FS=1.219;HRun=12;HaplotypeScore=71.6463;InbreedingCoeff=0.3081;MQ=75.04;MQ0=1;MQRankSum=-0.819;QD=4.68;ReadPosRankSum=0.671;VQSLOD=1.6076;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,16:22:46.83:354,47,0	0/0:9,1:10:11.73:0,12,219	0/0:29,1:25:15.42:0,15,244	0/0:13,1:11:4.97:0,5,81	0/1:17,2:19:10.40:10,0,267	0/0:28,0:30:68.81:0,69,668	0/0:17,0:18:47.93:0,48,471	0/0:13,0:26:45.98:0,46,258	0/0:15,1:16:12.77:0,13,292	0/0:18,2:21:27.66:0,28,433	0/0:26,0:26:62.61:0,63,618	0/1:8,1:9:2.20:2,0,162	0/0:17,2:19:4.63:0,5,410	0/0:15,1:16:21.84:0,22,398	0/0:16,1:17:21.85:0,22,398	0/0:18,0:18:44.88:0,45,482	0/0:22,0:22:60.08:0,60,595	0/1:5,10:16:4.51:143,0,5	0/0:22,0:23:56.89:0,57,543	0/1:18,4:23:28.86:29,0,375	0/0:16,0:16:44.92:0,45,426	0/0:17,0:18:31.98:0,32,474	0/0:20,0:20:51.71:0,52,483	0/0:18,0:20:13.88:0,14,303	0/0:18,0:19:50.87:0,51,473	0/0:8,0:27:57.26:0,57,314	0/0:31,0:31:66.12:0,66,664	0/0:2,0:10:25.69:0,26,134
chr10	98813210	.	TA	T	992.15	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.388;DP=238;FS=1.048;HRun=9;HaplotypeScore=34.0559;InbreedingCoeff=0.8201;MQ=76.47;MQ0=0;MQRankSum=-6.126;QD=18.72;ReadPosRankSum=-2.934;VQSLOD=2.2360;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:6:12:108,12,0	0/0:5,0:5:12.04:0,12,138	0/0:16,0:13:14.98:0,15,158	0/0:8,0:7:5.58:0,6,33	0/0:5,0:5:12.04:0,12,138	0/0:13,0:13:33.10:0,33,381	0/0:5,0:5:15.04:0,15,173	1/1:2,15:17:45:406,45,0	0/0:4,0:4:6.02:0,6,69	0/0:12,0:12:24.06:0,24,270	0/0:12,0:12:21.06:0,21,242	0/0:8,0:8:18.05:0,18,208	0/0:8,0:8:18.05:0,18,208	0/0:2,0:2:3.01:0,3,35	0/0:6,0:6:18.05:0,18,208	0/0:11,0:11:24.07:0,24,277	0/0:14,0:14:36.11:0,36,415	1/1:2,11:13:11.28:226,11,0	0/0:17,0:17:42.10:0,42,466	0/0:8,0:8:21.06:0,21,242	0/0:4,0:4:9.03:0,9,104	0/0:5,0:5:12.03:0,12,138	0/0:2,0:2:6.02:0,6,69	0/0:4,0:4:9.03:0,9,104	0/0:7,0:7:21.02:0,21,227	1/1:0,9:9:23.89:200,24,0	0/0:9,0:9:24.06:0,24,266	1/1:0,8:8:24.01:218,24,0
chr10	98813224	.	A	AATATATGT	1243.81	PASS	AB=1.000;AC=9;AF=0.180;AN=50;BaseQRankSum=6.350;DP=174;FS=5.665;HRun=0;HaplotypeScore=51.7939;InbreedingCoeff=0.6241;MQ=76.36;MQ0=0;MQRankSum=-3.876;QD=29.61;ReadPosRankSum=-3.646;VQSLOD=1.7488;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:5,0:5:12.04:0,12,316	0/0:8,0:5:5.85:0,6,46	0/1:6,0:5:0.60:1,0,10	0/0:3,0:3:6.02:0,6,158	0/0:10,0:10:21.07:0,21,519	0/0:5,0:5:9.03:0,9,179	1/1:18,0:17:30.08:627,30,0	0/0:2,0:2:6.02:0,6,129	0/0:8,0:8:18.06:0,18,431	0/0:9,0:9:15.05:0,15,329	0/0:5,0:5:12.04:0,12,258	0/0:7,0:7:18.06:0,18,387	0/0:1,0:1:3.01:0,3,79	0/0:5,0:5:12.04:0,12,281	./.	0/0:13,0:13:30.10:0,30,752	1/1:1,0:1:2.99:23,3,0	0/0:13,0:13:18.05:0,18,376	0/0:7,0:7:21.07:0,21,496	0/0:2,0:2:6.02:0,6,100	./.	0/0:2,0:2:3.01:0,3,79	0/0:3,0:3:6.02:0,6,96	0/0:6,0:6:15.05:0,15,353	1/1:5,4:9:18.02:560,18,0	0/0:9,0:9:24.08:0,24,573	1/1:6,2:8:9.03:171,9,0
chr10	98813250	.	T	TAC	655.18	PASS	AB=0.590;AC=7;AF=0.146;AN=48;BaseQRankSum=6.252;DP=147;FS=10.613;HRun=0;HaplotypeScore=33.7894;InbreedingCoeff=0.4532;MQ=63.44;MQ0=5;MQRankSum=-6.026;QD=19.27;ReadPosRankSum=-0.440;VQSLOD=2.1402;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:5,0:5:15.05:0,15,227	0/0:10,0:1:0:0,0,0	0/0:15,0:8:1.22:0,1,45	0/0:2,0:2:6.02:0,6,92	0/0:8,0:8:24:0,24,334	0/0:1,0:1:3.01:0,3,44	0/1:7,16:21:0.32:551,0,0	0/0:1,0:1:3.01:0,3,46	0/0:6,0:6:18.06:0,18,276	0/0:3,0:3:9.03:0,9,136	0/0:2,0:2:6.02:0,6,92	0/0:5,0:5:12.03:0,12,163	0/0:2,0:2:6.02:0,6,90	0/0:5,0:5:12.03:0,12,161	./.	0/0:16,0:16:36.07:0,36,502	1/1:1,0:1:0.47:1,0,0	0/0:8,0:8:21.07:0,21,321	0/0:5,0:5:15.05:0,15,230	./.	./.	0/0:1,0:1:3.01:0,3,46	0/0:1,0:1:2.99:0,3,23	0/0:6,0:6:17.98:0,18,238	1/1:1,5:6:15.02:192,15,0	0/0:8,0:8:24.06:0,24,344	1/1:1,3:4:2.42:19,2,0
chr10	98813264	.	T	TA	934.52	PASS	AB=1.000;AC=7;AF=0.167;AN=42;BaseQRankSum=5.953;DP=142;FS=3.289;HRun=1;HaplotypeScore=32.8468;InbreedingCoeff=0.5761;MQ=60.87;MQ0=8;MQRankSum=-7.144;QD=25.26;ReadPosRankSum=0.547;VQSLOD=3.4720;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:4:12.04:0,12,166	0/0:12,0:2:2.88:0,3,15	0/0:23,0:6:9.03:0,9,111	0/0:2,0:2:6.02:0,6,84	0/0:7,0:7:18.06:0,18,248	./.	1/1:5,21:22:53.54:800,54,0	0/0:1,0:1:3.01:0,3,42	0/0:6,0:6:18.06:0,18,250	0/0:2,0:2:6.02:0,6,82	0/0:2,0:2:6.02:0,6,84	0/0:3,0:3:9.03:0,9,124	0/0:1,0:1:3.01:0,3,42	0/0:3,0:3:6:0,6,82	./.	0/0:16,0:17:35.66:0,36,424	0/1:2,0:2:0:0,0,0	0/0:7,0:7:21.07:0,21,288	0/0:5,0:5:15.04:0,15,190	./.	./.	./.	./.	0/0:4,0:4:9.03:0,9,123	1/1:0,5:5:15.05:207,15,0	0/0:5,0:5:15.05:0,15,209	1/1:1,3:4:3.01:47,3,0
chr10	98813272	.	G	GTA	73.80	PASS	AB=0.935;AC=8;AF=0.364;AN=22;BaseQRankSum=-0.132;DP=141;FS=0.000;HRun=0;HaplotypeScore=39.0077;InbreedingCoeff=0.0739;MQ=58.13;MQ0=8;MQRankSum=-1.009;QD=1.25;ReadPosRankSum=-0.658;VQSLOD=1.1799;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/1:3,0:3:27.34:38,0,27	./.	./.	./.	0/0:6,0:6:6.48:0,6,59	./.	0/1:27,0:23:0:0,0,0	./.	./.	./.	./.	./.	0/0:1,0:1:3.01:0,3,33	0/1:2,0:2:0:0,0,0	./.	0/1:10,6:17:50.18:99,0,50	1/1:5,0:5:0.13:1,0,0	0/0:4,0:4:2.99:0,3,24	./.	./.	./.	./.	./.	0/0:3,0:3:5.98:0,6,54	./.	0/0:4,0:4:3.01:0,3,33	1/1:4,1:5:2.84:16,3,0
chr10	98813459	.	G	GCC	930.74	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=-3.851;DP=414;FS=17.005;HRun=8;HaplotypeScore=52.9409;InbreedingCoeff=0.9190;MQ=89.69;MQ0=0;MQRankSum=-2.973;QD=18.25;ReadPosRankSum=-0.342;VQSLOD=0.3097;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,30:39:54.14:810,54,0	0/0:3,0:3:6.01:0,6,67	0/0:21,0:21:47.97:0,48,491	0/0:16,0:17:14.98:0,15,162	0/0:11,0:11:24.06:0,24,268	0/0:21,0:21:60.15:0,60,668	0/0:15,0:15:42.09:0,42,459	0/0:28,0:28:60.08:0,60,660	0/0:13,0:13:36.08:0,36,391	0/0:11,0:11:30.07:0,30,325	0/0:8,0:8:21.05:0,21,234	0/0:11,0:11:30.05:0,30,324	0/0:7,0:7:21.06:0,21,234	0/0:7,0:7:18.05:0,18,201	0/0:12,0:13:35.83:0,36,380	0/0:13,0:13:33.08:0,33,368	0/0:23,0:23:60.16:0,60,668	1/1:3,9:12:15.05:238,15,0	0/0:13,0:13:39.08:0,39,418	0/0:10,0:10:27.07:0,27,301	0/0:39,0:39:99:0,102,1137	0/0:7,0:7:18.05:0,18,201	0/0:12,0:12:36.10:0,36,401	0/0:18,0:18:51.07:0,51,544	0/0:13,0:13:36.08:0,36,393	0/0:17,0:17:45.10:0,45,502	0/0:12,0:12:36.08:0,36,391	./.
chr10	98813638	.	TAG	T	2052.15	PASS	AB=0.799;AC=12;AF=0.214;AN=56;BaseQRankSum=9.675;DP=552;FS=0.464;HRun=0;HaplotypeScore=76.3318;InbreedingCoeff=0.8157;MQ=71.94;MQ0=1;MQRankSum=-2.955;QD=13.50;ReadPosRankSum=-0.897;VQSLOD=3.0187;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:20:42.20:203,42,0	0/0:7,0:7:15.05:0,15,243	0/0:33,0:22:32.47:0,32,455	0/1:36,2:24:13.09:13,0,293	0/0:21,0:23:43:0,43,782	0/0:27,0:27:66.23:0,66,1063	0/0:22,0:22:48.16:0,48,763	1/1:14,24:39:77.86:869,78,0	0/0:11,0:11:27.07:0,27,396	0/0:24,0:24:48.13:0,48,749	0/0:15,0:15:33.10:0,33,503	0/0:21,0:21:36.12:0,36,576	0/0:12,0:12:33.10:0,33,503	0/0:18,0:18:39.13:0,39,629	0/0:20,0:20:42.14:0,42,670	1/1:4,9:13:33.10:403,33,0	0/0:30,0:30:66.19:0,66,1044	1/1:3,0:11:22.72:112,23,0	0/0:18,0:18:36.12:0,36,576	0/0:12,0:12:30.10:0,30,485	0/0:23,1:24:20.52:0,21,839	0/0:22,1:23:14.49:0,14,716	0/0:10,0:10:24.08:0,24,381	0/0:21,0:21:54.18:0,54,876	0/0:11,0:11:24.08:0,24,389	0/1:10,12:22:3.55:449,0,4	0/0:18,0:18:45.15:0,45,719	1/1:3,6:9:15.05:183,15,0
chr10	98813685	.	TAC	T	207.05	PASS	AB=0.906;AC=10;AF=0.192;AN=52;BaseQRankSum=6.108;DP=611;FS=2.006;HRun=0;HaplotypeScore=92.1547;InbreedingCoeff=-0.0951;MQ=56.60;MQ0=13;MQRankSum=0.013;QD=1.13;ReadPosRankSum=-0.534;VQSLOD=1.4908;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:28.54:29,0,58	0/0:6,0:6:5.88:0,6,44	./.	./.	0/0:20,0:20:0.27:0,0,377	0/0:31,0:31:14.80:0,15,720	0/1:22,0:21:30.10:30,0,410	0/0:42,0:42:43.77:0,44,602	0/0:15,1:16:1.88:0,2,457	0/0:25,0:24:51.02:0,51,713	0/0:14,0:14:28.97:0,29,436	0/0:15,0:15:13:0,13,350	0/0:14,1:15:0.57:0,1,434	0/0:20,0:20:2.30:0,2,546	0/1:18,3:21:32.23:32,0,423	0/0:15,0:16:20.56:0,21,157	0/0:25,0:25:36.34:0,36,625	1/1:16,0:16:10.63:44,11,0	0/0:24,0:22:36.16:0,36,486	0/1:18,1:20:8.20:8,0,502	0/0:34,0:34:7.08:0,7,899	0/1:21,3:24:20.22:20,0,556	0/0:16,0:16:34.32:0,34,457	0/0:26,3:29:20.35:0,20,646	0/1:8,2:10:10.13:10,0,271	0/1:23,3:26:99:135,0,623	0/0:25,1:26:22.99:0,23,774	0/1:13,3:16:35.28:35,0,359
chr10	98813713	.	CACAT	C	670.54	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.369;DP=654;FS=0.640;HRun=0;HaplotypeScore=121.7315;InbreedingCoeff=0.9830;MQ=62.05;MQ0=10;MQRankSum=-2.751;QD=15.24;ReadPosRankSum=-1.297;VQSLOD=3.3095;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,2:29:31:396,31,0	0/0:4,0:4:12.01:0,12,152	0/0:30,0:18:41.52:0,42,426	0/0:23,0:13:33:0,33,320	0/0:19,0:19:44.60:0,45,806	0/0:27,0:27:74.94:0,75,1411	0/0:23,0:22:59.77:0,60,939	0/0:47,0:47:99:0,123,1644	0/0:18,0:18:45.09:0,45,942	0/0:23,0:22:63.09:0,63,1259	0/0:21,0:21:30.08:0,30,852	0/0:19,0:19:30.04:0,30,748	0/0:17,0:17:40.12:0,40,957	0/0:21,0:21:39.03:0,39,961	0/0:17,0:16:45.09:0,45,922	0/0:22,0:22:44.76:0,45,448	0/0:24,0:24:32.34:0,32,1070	1/1:11,4:15:35.84:396,36,0	0/0:28,0:28:67.48:0,67,1133	0/0:26,0:26:51.62:0,52,1267	0/0:36,0:36:93.82:0,94,1935	0/0:26,0:26:68.75:0,69,1155	0/0:18,0:18:44.64:0,45,755	0/0:25,0:25:57.07:0,57,1208	0/0:14,0:14:36.06:0,36,647	0/0:38,0:38:77.31:0,77,1523	0/0:26,0:26:65.88:0,66,1387	0/0:18,0:18:44.99:0,45,820
chr10	98813772	.	TA	T	1327.61	PASS	AB=0.881;AC=8;AF=0.143;AN=56;BaseQRankSum=7.193;DP=552;FS=1.528;HRun=11;HaplotypeScore=63.0078;InbreedingCoeff=0.7429;MQ=69.87;MQ0=0;MQRankSum=-0.457;QD=14.59;ReadPosRankSum=-0.893;VQSLOD=3.8406;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:36:68.51:0,69,365	0/1:4,1:5:9.55:10,0,113	0/1:12,1:11:0.79:1,0,158	0/0:14,0:9:12:0,12,112	0/0:21,0:21:57.13:0,57,601	0/0:21,0:20:57.14:0,57,608	0/0:13,1:14:11.57:0,12,320	1/1:4,26:31:76.87:609,77,0	0/0:12,0:12:27.04:0,27,277	0/0:18,1:19:14.45:0,14,354	0/0:23,0:24:53.95:0,54,550	0/0:28,0:28:67.39:0,67,693	0/0:18,1:19:23.06:0,23,427	0/0:12,1:13:11.44:0,11,315	0/0:18,0:18:19.92:0,20,360	0/0:2,0:17:34.12:0,34,171	0/0:15,0:15:32.14:0,32,378	0/0:1,0:8:17.11:0,17,86	0/0:24,1:26:44.21:0,44,634	0/0:27,0:27:66.06:0,66,673	0/0:25,1:26:41.14:0,41,596	0/0:20,0:20:48.10:0,48,497	0/0:19,0:19:57.12:0,57,599	0/0:16,0:16:42.11:0,42,448	0/0:25,1:26:50.53:0,51,731	1/1:4,25:30:44.91:560,45,0	0/0:22,0:22:60.13:0,60,631	1/1:0,12:12:35.96:296,36,0
chr10	98813885	.	A	ATT	1848.35	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.045;DP=631;FS=1.293;HRun=5;HaplotypeScore=79.7586;InbreedingCoeff=0.9980;MQ=66.17;MQ0=0;MQRankSum=-2.376;QD=35.55;ReadPosRankSum=1.792;VQSLOD=3.3243;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,35:40:93.23:1561,93,0	0/0:12,0:12:30.09:0,30,382	0/0:26,0:25:67.90:0,68,841	0/0:25,0:25:63.17:0,63,769	0/0:28,0:28:78.25:0,78,994	0/0:29,0:29:87.27:0,87,1095	0/0:17,0:17:48.14:0,48,593	0/0:24,0:24:72.22:0,72,904	0/0:21,0:21:57.15:0,57,710	0/0:33,0:33:96.29:0,96,1201	0/0:13,0:13:39.12:0,39,497	0/0:22,0:22:60.19:0,60,764	0/0:21,0:21:57.18:0,57,727	0/0:23,0:23:66.21:0,66,841	0/0:24,0:24:63.19:0,63,790	0/0:14,0:14:39.12:0,39,497	0/0:31,0:31:90.28:0,90,1147	1/1:3,9:12:24.08:409,24,0	0/0:20,0:20:54.16:0,54,677	0/0:27,0:27:78.22:0,78,966	0/0:21,0:21:63.20:0,63,803	0/0:29,0:29:87.26:0,87,1093	0/0:20,0:20:57.18:0,57,726	0/0:11,0:11:27.08:0,27,344	0/0:19,0:19:54.15:0,54,674	0/0:32,0:32:90.28:0,90,1147	0/0:24,0:24:69.22:0,69,879	0/0:13,0:13:33.10:0,33,421
chr10	98814232	.	TAC	T	175.04	PASS	AB=0.908;AC=17;AF=0.354;AN=48;BaseQRankSum=4.739;DP=512;FS=1.830;HRun=0;HaplotypeScore=77.0722;InbreedingCoeff=-0.1094;MQ=63.31;MQ0=7;MQRankSum=-0.610;QD=0.68;ReadPosRankSum=3.432;VQSLOD=1.5128;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:25,1:25:59.35:59,0,83	0/0:7,0:7:9:0,9,110	./.	./.	0/1:14,2:16:8.58:9,0,179	0/0:26,0:25:14.99:0,15,155	0/1:11,1:12:20.51:21,0,99	./.	0/1:13,1:14:2.49:2,0,323	0/1:10,2:12:20.50:21,0,79	0/0:18,0:18:17.79:0,18,146	0/0:15,0:15:14.69:0,15,157	0/1:9,6:15:22.24:22,0,82	0/0:15,0:15:20.96:0,21,234	0/1:13,0:13:0.80:1,0,191	0/0:8,0:16:19.26:0,19,197	0/0:24,0:24:23.55:0,24,238	0/1:21,0:22:10.86:11,0,155	./.	0/1:20,1:21:2.46:2,0,204	0/0:32,0:30:21.05:0,21,254	0/1:16,0:16:17.48:17,0,19	0/1:16,4:19:8.93:9,0,209	0/1:28,0:29:7.94:8,0,216	0/1:13,4:17:14.48:14,0,170	1/1:11,0:18:14.20:70,14,0	0/0:23,0:23:32.95:0,33,435	1/1:2,0:7:11.36:56,11,0
chr10	98814664	.	C	CA	3668.41	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-10.780;DP=680;FS=4.095;HRun=7;HaplotypeScore=64.3820;InbreedingCoeff=0.9982;MQ=87.93;MQ0=0;MQRankSum=0.881;QD=28.00;ReadPosRankSum=-1.372;VQSLOD=3.9489;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:4,28:32:72.22:870,72,0	0/0:7,0:7:18.03:0,18,174	0/0:21,0:21:50.45:0,50,481	0/0:25,0:26:40.58:0,41,376	0/0:34,0:34:92.98:0,93,883	0/0:33,0:33:99:0,99,956	0/0:21,0:21:60.07:0,60,570	1/1:5,24:29:46.23:818,46,0	0/0:27,1:28:35.84:0,36,618	0/0:29,0:29:66.09:0,66,634	0/0:24,0:24:72.11:0,72,692	0/0:26,0:26:69.09:0,69,660	0/0:22,0:22:60.07:0,60,572	0/0:17,0:17:45.05:0,45,428	0/0:14,0:14:39.06:0,39,377	1/1:2,13:15:33.10:397,33,0	0/0:31,0:31:81.13:0,81,782	1/1:1,14:15:36.11:428,36,0	0/0:22,0:21:63.10:0,63,608	0/0:33,0:33:84.09:0,84,797	0/0:27,0:27:75.10:0,75,718	0/0:28,0:28:78.12:0,78,753	0/0:31,0:31:78.07:0,78,739	0/0:21,0:21:60.10:0,60,579	0/0:26,0:26:66.08:0,66,630	1/1:7,19:26:37.79:685,38,0	0/0:28,0:28:81.12:0,81,780	1/1:0,14:14:39.12:471,39,0
chr10	98815655	.	AGGGGAG	A	308.99	PASS	AB=0.750;AC=3;AF=0.056;AN=54;BaseQRankSum=3.899;DP=271;FS=22.320;HRun=0;HaplotypeScore=48.2899;InbreedingCoeff=0.4703;MQ=50.48;MQ0=19;MQRankSum=-4.296;QD=25.75;ReadPosRankSum=2.979;VQSLOD=1.4810;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,7:8:18.02:351,18,0	0/0:2,0:2:6.02:0,6,203	0/0:6,0:1:3.01:0,3,60	./.	0/0:11,0:9:18.06:0,18,602	0/0:7,0:7:12.04:0,12,412	0/0:11,0:11:23.37:0,23,696	0/0:12,0:9:24.08:0,24,764	0/0:9,0:8:21.07:0,21,609	0/0:10,0:7:15.05:0,15,505	0/0:7,0:7:18.06:0,18,483	0/0:15,0:13:30.10:0,30,913	0/0:8,0:7:21.07:0,21,645	0/0:7,0:5:15.05:0,15,446	0/0:10,0:9:24.08:0,24,729	0/0:15,0:12:33.11:0,33,1107	0/0:17,0:16:33.11:0,33,1029	0/1:2,1:3:60.35:60,0,96	0/0:15,0:9:21.07:0,21,718	0/0:8,0:7:21.03:0,21,638	0/0:18,0:17:45.15:0,45,1508	0/0:17,0:15:27.09:0,27,886	0/0:8,0:8:18.05:0,18,452	0/0:11,0:11:15.05:0,15,485	0/0:7,0:7:18.06:0,18,618	0/0:7,0:5:15.05:0,15,509	0/0:9,0:8:21.07:0,21,599	0/0:4,0:4:12.04:0,12,371
chr10	98815769	.	C	CA	1058.62	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.125;DP=399;FS=10.747;HRun=7;HaplotypeScore=45.7382;InbreedingCoeff=0.9237;MQ=75.56;MQ0=0;MQRankSum=-1.335;QD=25.82;ReadPosRankSum=1.520;VQSLOD=3.5616;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:54.17:652,54,0	0/0:3,0:3:6.01:0,6,58	0/0:10,0:11:21.06:0,21,219	0/0:12,0:12:25.83:0,26,209	0/0:14,0:14:27.03:0,27,261	0/0:8,0:8:18.02:0,18,174	0/0:13,0:13:36.04:0,36,341	0/0:23,0:23:54.06:0,54,513	0/0:18,0:18:47.97:0,48,451	0/0:9,0:9:27.04:0,27,261	0/0:13,0:13:33.05:0,33,319	0/0:12,0:12:27.04:0,27,261	0/0:10,0:10:30.05:0,30,290	0/0:17,0:17:45.07:0,45,435	0/0:14,0:14:36.05:0,36,348	0/0:12,0:12:33.05:0,33,318	0/0:18,0:18:47.89:0,48,424	1/1:3,15:18:32.34:528,32,0	0/0:22,0:22:63.09:0,63,603	0/0:17,0:17:48.07:0,48,463	0/0:24,0:24:69.09:0,69,660	0/0:4,0:4:12.02:0,12,116	0/0:8,0:8:24.04:0,24,232	0/0:12,0:12:33.05:0,33,318	0/0:21,0:21:54.07:0,54,516	0/0:17,0:17:48.06:0,48,455	0/0:17,0:17:42.05:0,42,399	0/0:9,0:9:24.04:0,24,232
chr10	98815988	.	AT	A	863.33	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.287;DP=397;FS=4.265;HRun=8;HaplotypeScore=40.3793;InbreedingCoeff=0.8351;MQ=72.68;MQ0=3;MQRankSum=-1.341;QD=21.58;ReadPosRankSum=2.064;VQSLOD=3.6571;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:45.07:435,45,0	0/0:5,0:5:15.05:0,15,181	0/0:11,0:7:12.94:0,13,138	0/0:7,0:7:5.74:0,6,63	0/0:19,0:19:57.17:0,57,678	0/0:13,0:13:39.12:0,39,471	0/0:15,0:15:39.12:0,39,471	0/0:25,0:25:66.15:0,66,739	0/0:13,0:13:36.04:0,36,416	0/0:20,0:20:57.15:0,57,666	0/0:16,0:16:42.11:0,42,486	0/0:14,0:14:39.12:0,39,471	0/0:9,0:9:21.06:0,21,254	0/0:10,0:10:23.98:0,24,259	0/0:11,0:11:27.07:0,27,315	0/0:13,0:13:36.10:0,36,423	0/0:18,1:19:22.16:0,22,536	1/1:5,17:22:57.09:550,57,0	0/0:14,0:15:38.96:0,39,421	0/0:17,0:17:45.11:0,45,520	0/0:4,0:4:12.02:0,12,133	0/0:2,0:2:3.01:0,3,36	0/0:11,0:11:30.07:0,30,339	0/0:8,0:8:21.06:0,21,253	0/0:14,0:14:42.11:0,42,488	0/0:26,0:26:63.18:0,63,751	0/0:25,0:25:66.20:0,66,797	0/0:15,0:15:42.11:0,42,493
chr10	98816179	.	TG	T	1073.89	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.504;DP=728;FS=3.395;HRun=2;HaplotypeScore=72.1886;InbreedingCoeff=0.8971;MQ=86.31;MQ0=0;MQRankSum=-1.647;QD=35.80;ReadPosRankSum=1.599;VQSLOD=4.3752;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,172,2478	0/0:6,0:6:18.06:0,18,268	0/0:28,0:28:81.27:0,81,1189	0/0:19,0:19:53.83:0,54,773	0/0:29,0:29:75.25:0,75,1122	0/0:26,0:26:78.26:0,78,1169	0/0:28,0:28:81.26:0,81,1195	0/0:19,0:19:57.18:0,57,835	0/0:30,0:30:90.30:0,90,1345	0/0:21,0:21:60.20:0,60,880	0/0:18,0:18:54.18:0,54,808	0/0:31,0:31:93.31:0,93,1391	0/0:29,0:29:87.29:0,87,1303	0/0:27,0:27:78.23:0,78,1106	0/0:33,0:33:93.32:0,93,1393	1/1:0,30:30:90.29:1169,90,0	0/0:34,0:34:99:0,102,1503	0/0:22,0:22:63.21:0,63,944	0/0:31,0:31:93.30:0,93,1352	0/0:25,0:25:69.23:0,69,1033	0/0:60,0:60:99:0,181,2649	0/0:10,0:10:24.08:0,24,357	0/0:16,0:16:48.14:0,48,676	0/0:23,0:23:69.23:0,69,1034	0/0:16,0:16:48.12:0,48,693	0/0:29,0:29:87.29:0,87,1284	0/0:26,0:26:78.25:0,78,1146	0/0:2,0:2:6.02:0,6,90
chr10	98816307	.	ATC	A	3105.38	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.910;DP=707;FS=4.358;HRun=0;HaplotypeScore=82.3133;InbreedingCoeff=0.9987;MQ=93.35;MQ0=0;MQRankSum=-3.856;QD=41.96;ReadPosRankSum=3.576;VQSLOD=5.2329;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,51:52:99:2150,132,0	0/0:8,0:8:24.08:0,24,471	0/0:33,0:33:93.32:0,93,1844	0/0:34,0:34:96.32:0,96,1830	0/0:28,0:28:84.27:0,84,1627	0/0:32,0:32:96.33:0,96,1923	0/0:31,0:31:93.32:0,93,1832	0/0:25,0:25:75.26:0,75,1524	0/0:28,0:28:84.26:0,84,1605	0/0:26,0:26:78.25:0,78,1487	0/0:16,0:16:48.16:0,48,974	0/0:24,0:24:72.25:0,72,1463	0/0:22,0:22:66.23:0,66,1334	0/0:18,0:18:54.19:0,54,1079	0/0:31,0:31:93.32:0,93,1889	0/0:25,0:25:72.25:0,72,1433	0/0:27,0:27:81.28:0,81,1601	1/1:0,22:22:66.23:1077,66,0	0/0:25,0:25:75.26:0,75,1501	0/0:17,0:17:51.18:0,51,1036	0/0:42,0:42:99:0,126,2521	0/0:23,0:23:69.23:0,69,1336	0/0:11,0:11:33.10:0,33,632	0/0:25,0:25:75.26:0,75,1523	0/0:24,0:24:72.25:0,72,1451	0/0:26,0:26:78.27:0,78,1558	0/0:20,0:20:60.21:0,60,1202	0/0:12,0:12:36.12:0,36,694
chr10	98816478	.	GAC	G	828.79	PASS	AB=0.894;AC=22;AF=0.423;AN=52;BaseQRankSum=6.618;DP=571;FS=4.829;HRun=0;HaplotypeScore=73.2547;InbreedingCoeff=-0.5800;MQ=71.32;MQ0=11;MQRankSum=-0.457;QD=1.98;ReadPosRankSum=2.275;VQSLOD=0.9292;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:31:20.05:111,20,0	0/1:12,0:13:11.94:12,0,326	./.	0/0:30,0:22:0.89:0,1,2	0/1:27,2:29:26.50:27,0,427	0/1:23,2:23:29.58:30,0,391	0/1:20,2:22:74.26:74,0,200	./.	0/0:21,1:22:6.30:0,6,485	0/0:17,0:16:19.31:0,19,272	0/1:15,1:16:20.80:21,0,122	0/1:16,1:19:11.81:12,0,206	0/1:9,1:10:20.79:21,0,122	0/1:5,1:6:26.83:27,0,39	0/1:9,5:14:47.16:47,0,141	0/0:14,0:24:18:0,18,174	0/1:28,2:32:64.34:64,0,490	0/1:7,1:11:20.81:21,0,98	0/0:10,0:10:6.02:0,6,89	0/1:14,2:16:44.61:45,0,203	0/1:33,3:36:8.82:9,0,209	0/1:18,4:21:80.48:80,0,116	0/1:20,0:20:64.47:64,0,179	0/1:21,5:26:99:128,0,215	0/1:12,1:15:28.93:29,0,131	0/1:10,3:14:28.26:98,0,28	0/1:26,2:28:4.36:4,0,448	0/1:9,3:12:53.65:54,0,65
chr10	98817199	.	A	AT	849.27	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=4.515;DP=669;FS=0.735;HRun=6;HaplotypeScore=78.2586;InbreedingCoeff=0.7376;MQ=72.86;MQ0=0;MQRankSum=-1.195;QD=19.30;ReadPosRankSum=0.790;VQSLOD=3.2047;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:90.16:0,90,908	0/0:8,0:8:24.05:0,24,245	0/0:16,0:16:32.18:0,32,348	0/1:16,0:15:2.91:3,0,214	0/0:28,0:28:78.17:0,78,795	0/0:21,0:21:60.13:0,60,612	0/0:26,0:26:78.16:0,78,788	0/0:23,0:23:54.12:0,54,551	0/0:23,0:23:69.16:0,69,704	0/0:29,0:29:81.17:0,81,821	0/0:22,0:22:63.14:0,63,643	0/0:22,0:22:57.12:0,57,581	0/0:20,0:20:54.10:0,54,544	0/0:26,0:26:72.16:0,72,734	0/0:23,0:23:60.12:0,60,606	1/1:3,25:28:75.24:944,75,0	0/0:44,0:44:99:0,126,1270	0/0:23,0:23:63.09:0,63,625	0/0:25,0:25:60.12:0,60,606	0/0:27,0:27:81.18:0,81,826	0/0:23,0:23:63.09:0,63,626	0/0:19,0:19:54.12:0,54,551	0/0:19,0:19:54.10:0,54,538	0/0:21,0:21:60.14:0,60,612	0/0:23,0:23:66.15:0,66,673	0/0:37,0:37:99:0,108,1102	0/0:30,0:30:87.16:0,87,873	0/0:12,0:12:36.08:0,36,367
chr10	98818394	.	GTGTA	G	2470.95	PASS	AB=0.909;AC=13;AF=0.250;AN=52;BaseQRankSum=12.866;DP=938;FS=3.628;HRun=0;HaplotypeScore=194.8826;InbreedingCoeff=0.5062;MQ=56.87;MQ0=6;MQRankSum=-5.666;QD=7.95;ReadPosRankSum=-0.058;VQSLOD=2.8640;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,20:44:25.97:594,26,0	0/1:9,0:9:4.09:4,0,252	./.	./.	0/1:22,0:22:10.81:11,0,671	0/0:37,1:38:34.30:0,34,1536	0/0:29,0:29:48.15:0,48,993	1/1:49,0:61:29.65:207,30,0	0/0:32,1:33:31.35:0,31,1724	0/0:46,0:46:96.32:0,96,2176	0/0:30,0:30:54.19:0,54,1235	0/0:34,0:34:63.10:0,63,1312	0/1:44,2:46:6.56:7,0,1730	0/0:36,0:36:69.22:0,69,1528	0/0:54,0:54:81.26:0,81,1815	1/1:31,0:31:39.12:579,39,0	0/0:37,0:37:57.15:0,57,1243	0/1:18,12:30:56.74:261,0,57	0/0:22,0:20:30.10:0,30,710	0/0:32,1:33:10.22:0,10,1013	0/0:41,0:41:57.18:0,57,1260	0/0:39,0:39:57.18:0,57,1277	0/0:29,0:30:30.09:0,30,665	0/0:30,0:30:38.78:0,39,786	0/0:13,0:13:21.07:0,21,497	0/1:40,0:47:72.85:835,0,73	0/0:45,0:45:90.29:0,90,2014	1/1:18,0:18:9.03:141,9,0
chr10	98818404	.	GTA	G	366.29	PASS	AB=0.844;AC=5;AF=0.089;AN=56;BaseQRankSum=12.376;DP=900;FS=3.646;HRun=0;HaplotypeScore=159.9300;InbreedingCoeff=-0.0811;MQ=56.35;MQ0=9;MQRankSum=-5.823;QD=2.33;ReadPosRankSum=4.140;VQSLOD=2.6153;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:1.59:2,0,338	0/0:12,0:12:21.58:0,22,475	0/0:16,0:6:18.06:0,18,257	0/0:11,0:4:11.99:0,12,132	0/0:24,0:24:66.81:0,67,1137	0/0:38,0:38:99:0,109,1966	0/0:29,0:29:81.23:0,81,1365	0/0:54,0:51:69.51:0,70,713	0/0:38,0:38:99:0,106,1914	0/0:44,0:44:99:0,132,2355	0/0:30,0:30:87.28:0,87,1506	0/0:34,0:34:99:0,99,1674	0/0:47,0:47:99:0,128,2253	0/0:37,0:37:99:0,105,1809	0/0:48,0:48:99:0,138,2337	0/1:15,15:30:99:201,0,144	0/0:33,0:33:90.29:0,90,1543	0/1:29,0:29:0.55:1,0,551	0/0:22,0:20:60.12:0,60,967	0/0:33,0:33:93.91:0,94,1576	0/0:37,0:37:99:0,99,1675	0/0:37,0:37:99:0,105,1783	0/0:27,0:27:78.22:0,78,1254	0/0:30,0:30:63.33:0,63,1112	0/0:16,0:16:45.14:0,45,729	0/1:26,18:44:99:230,0,364	0/0:46,0:46:99:0,135,2408	0/1:13,3:16:34.55:35,0,139
chr10	98818408	.	GTA	G	319.10	PASS	AB=0.735;AC=3;AF=0.054;AN=56;BaseQRankSum=12.401;DP=883;FS=3.715;HRun=0;HaplotypeScore=157.8454;InbreedingCoeff=-0.0673;MQ=56.34;MQ0=10;MQRankSum=-5.154;QD=3.63;ReadPosRankSum=5.206;VQSLOD=2.3981;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:1.44:0,1,383	0/0:12,0:12:31.78:0,32,492	0/0:16,0:7:21.03:0,21,276	0/0:10,0:4:11:0,11,75	0/0:22,0:22:60.82:0,61,1089	0/0:39,0:39:99:0,112,1989	0/0:29,0:29:81.21:0,81,1349	0/0:50,0:47:87.10:0,87,766	0/0:38,0:38:99:0,106,1894	0/0:45,0:45:99:0,133,2384	0/0:28,0:28:84.27:0,84,1467	0/0:33,0:33:96.28:0,96,1683	0/0:47,0:47:99:0,119,2150	0/0:36,0:36:99:0,105,1823	0/0:48,0:48:99:0,138,2322	0/1:14,15:29:99:156,0,156	0/0:33,0:33:87.27:0,87,1495	0/0:26,0:27:14.77:0,15,518	0/0:22,0:20:60.20:0,60,1006	0/0:32,0:32:90.88:0,91,1537	0/0:34,0:34:93.32:0,93,1627	0/0:34,0:34:99:0,102,1740	0/0:28,0:28:81.25:0,81,1299	0/0:30,0:30:60.34:0,60,1081	0/0:17,0:17:48.16:0,48,790	0/1:25,18:43:99:229,0,374	0/0:46,0:46:99:0,138,2413	0/1:13,3:16:34.39:34,0,146
chr10	98819440	.	AT	A	560.28	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.375;DP=644;FS=1.388;HRun=3;HaplotypeScore=94.3196;InbreedingCoeff=0.9668;MQ=80.58;MQ0=2;MQRankSum=-5.815;QD=13.03;ReadPosRankSum=-2.687;VQSLOD=1.6490;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,13:31:50.46:447,50,0	0/0:12,0:12:33.08:0,33,451	0/0:50,1:33:46.89:0,47,675	0/0:40,0:28:52.58:0,53,412	0/0:27,0:27:81.21:0,81,1087	0/0:21,0:21:60.16:0,60,805	0/0:24,0:24:72.16:0,72,990	0/0:24,0:24:69.12:0,69,452	0/0:17,0:17:45.54:0,46,541	0/0:25,0:25:72.20:0,72,983	0/0:33,0:33:96.27:0,96,1288	0/0:15,0:15:45.03:0,45,563	0/0:20,0:20:60.15:0,60,787	0/0:20,0:20:57.16:0,57,764	0/0:20,0:20:60.12:0,60,763	0/0:19,0:19:51.25:0,51,304	0/0:30,0:30:87.27:0,87,1210	1/1:4,8:12:29.13:235,29,0	0/0:21,0:21:59.97:0,60,725	0/0:35,0:35:99:0,105,1439	0/0:28,0:28:78.22:0,78,1045	0/0:9,0:9:24.06:0,24,308	0/0:23,0:23:66.21:0,66,928	0/0:25,0:25:66.20:0,66,910	0/0:18,0:18:52.02:0,52,681	0/0:13,0:13:30.24:0,30,200	0/0:25,0:25:69.16:0,69,931	0/0:6,0:6:8.65:0,9,46
chr10	98819448	.	AAAAAAC	A	2967.55	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=11.269;DP=649;FS=0.468;HRun=0;HaplotypeScore=149.4300;InbreedingCoeff=0.9254;MQ=79.45;MQ0=2;MQRankSum=-10.783;QD=27.73;ReadPosRankSum=-1.904;VQSLOD=3.1578;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:0.45:307,0,0	0/0:10,0:10:30.10:0,30,980	0/0:52,0:31:67.30:0,67,1419	0/0:48,0:34:63.76:0,64,1348	0/0:30,0:30:87.30:0,87,2814	0/0:21,0:21:63.22:0,63,2010	0/0:25,0:25:72.21:0,72,2207	1/1:5,20:25:60.14:1121,60,0	0/0:15,0:15:42.14:0,42,1236	0/0:27,0:27:78.26:0,78,2372	0/0:29,0:29:84.28:0,84,2609	0/0:11,0:11:33.11:0,33,1040	0/0:20,0:20:57.19:0,57,1662	0/0:20,0:20:51.12:0,51,1531	0/0:20,0:20:51.16:0,51,1565	1/1:3,14:17:39.13:769,39,0	0/0:30,0:30:84.28:0,84,2528	1/1:15,0:15:15.43:286,15,0	0/0:21,0:21:48.13:0,48,1455	0/0:35,0:35:99:0,99,3079	0/0:27,0:27:69.21:0,69,2102	0/0:8,0:8:24.08:0,24,699	0/0:26,0:26:74.60:0,75,2229	0/0:25,0:25:72.24:0,72,2268	0/0:17,0:17:51.18:0,51,1612	1/1:3,8:11:24.07:468,24,0	0/0:25,0:25:72.20:0,72,2247	1/1:0,7:7:9.03:191,9,0
chr10	98819450	.	AAAAC	A	2371.73	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.532;DP=641;FS=0.925;HRun=0;HaplotypeScore=124.3025;InbreedingCoeff=0.9873;MQ=79.07;MQ0=2;MQRankSum=-10.621;QD=23.03;ReadPosRankSum=-2.877;VQSLOD=3.0273;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,13:29:46.59:681,47,0	0/0:10,0:10:30.10:0,30,716	0/0:51,0:30:53.35:0,53,981	0/0:48,0:34:74.32:0,74,1079	0/0:29,0:29:87.30:0,87,2051	0/0:22,0:22:66.19:0,66,1480	0/0:26,0:26:75.20:0,75,1650	1/1:23,0:24:57.12:594,57,0	0/0:15,0:15:45.07:0,45,884	0/0:29,0:29:84.25:0,84,1760	0/0:29,0:29:84.27:0,84,1875	0/0:11,0:11:33.11:0,33,753	0/0:20,0:20:60.15:0,60,1203	0/0:19,0:19:51.10:0,51,1124	0/0:20,0:20:54.11:0,54,1146	1/1:17,0:17:39.11:446,39,0	0/0:29,0:29:84.23:0,84,1817	1/1:10,6:16:41.99:467,42,0	0/0:20,0:20:48.06:0,48,1052	0/0:33,0:33:99:0,99,2218	0/0:25,0:25:69.18:0,69,1507	0/0:9,0:9:27.06:0,27,521	0/0:26,0:26:73.58:0,74,1616	0/0:24,0:24:72.23:0,72,1647	0/0:18,0:18:54.17:0,54,1190	1/1:10,0:10:24.06:265,24,0	0/0:25,0:25:72.20:0,72,1642	1/1:7,0:7:9.03:103,9,0
chr10	98819812	.	GA	G	2296.84	PASS	AB=0.875;AC=9;AF=0.161;AN=56;BaseQRankSum=7.474;DP=679;FS=1.755;HRun=10;HaplotypeScore=69.5101;InbreedingCoeff=0.8629;MQ=65.21;MQ0=2;MQRankSum=0.914;QD=17.14;ReadPosRankSum=1.143;VQSLOD=4.3232;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:35:78.89:0,79,444	0/0:7,0:7:21.06:0,21,232	0/1:18,3:20:52.10:52,0,275	0/0:9,0:8:20.89:0,21,211	0/0:23,0:23:63.16:0,63,689	0/0:23,1:25:48.98:0,49,751	0/0:22,0:22:57.14:0,57,623	1/1:6,28:34:80.94:696,81,0	0/0:23,0:23:63.17:0,63,697	0/0:26,0:26:69.18:0,69,757	0/0:27,1:29:33.72:0,34,558	0/0:21,2:23:17.09:0,17,636	0/0:19,0:19:48.11:0,48,515	0/0:16,0:16:42.11:0,42,464	0/0:19,0:19:51.14:0,51,564	1/1:3,24:27:44.66:549,45,0	0/0:26,0:26:66.17:0,66,722	0/0:3,0:32:71.05:0,71,355	0/0:19,1:20:31.10:0,31,571	0/0:24,1:25:25.09:0,25,505	0/0:23,0:23:63.11:0,63,674	0/0:24,1:25:63.16:0,63,688	0/0:28,0:28:75.03:0,75,807	0/0:27,1:28:52.16:0,52,803	0/0:20,0:20:51.14:0,51,564	1/1:4,28:32:53.89:696,54,0	0/0:40,0:40:99:0,111,1228	1/1:2,18:20:53.98:469,54,0
chr10	98820643	.	CAT	C	407.19	PASS	AB=0.903;AC=14;AF=0.292;AN=48;BaseQRankSum=3.246;DP=268;FS=16.779;HRun=0;HaplotypeScore=50.0496;InbreedingCoeff=0.1193;MQ=77.59;MQ0=3;MQRankSum=0.147;QD=3.84;ReadPosRankSum=-0.192;VQSLOD=-0.1207;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:4:9.03:0,9,142	./.	0/0:10,0:7:2.99:0,3,23	0/1:6,1:7:26.31:26,0,86	1/1:5,8:13:23.90:260,24,0	0/0:5,0:5:9.03:0,9,142	0/0:17,0:16:3.48:0,3,48	0/0:9,0:9:12.04:0,12,181	0/1:10,1:11:23.31:23,0,126	0/0:9,0:9:15.05:0,15,219	./.	0/0:3,0:3:9.03:0,9,138	0/0:5,0:5:3.01:0,3,47	0/1:10,1:11:20.24:20,0,153	1/1:6,0:6:0.38:1,0,0	0/1:22,6:27:99:117,0,569	0/1:15,0:15:6.70:7,0,7	0/0:8,0:8:8.46:0,8,85	0/0:8,0:8:15.05:0,15,232	0/0:12,0:12:18.06:0,18,284	./.	1/1:3,1:4:3.01:35,3,0	1/1:2,1:3:3.01:35,3,0	0/1:7,1:8:17.28:17,0,219	0/0:8,0:8:2.80:0,3,13	0/0:8,0:8:6.02:0,6,95	0/0:9,0:9:1.49:0,1,5
chr10	98820655	.	TATATATATATATGTATGTATGTATATATA	T	405.70	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=3.726;DP=190;FS=1.537;HRun=0;HaplotypeScore=134.2593;InbreedingCoeff=0.5268;MQ=67.74;MQ0=4;MQRankSum=-3.236;QD=25.36;ReadPosRankSum=-2.197;VQSLOD=1.7768;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,8:9:11.87:80,12,0	0/0:3,0:3:9.03:0,9,1231	0/0:4,0:2:3.01:0,3,38	0/0:12,0:4:4.98:0,5,93	0/0:6,0:6:15.05:0,15,1134	0/0:16,0:16:42.14:0,42,4045	0/0:4,0:4:12.04:0,12,1155	0/0:17,0:14:36.12:0,36,1259	0/0:5,0:5:15.05:0,15,1145	0/0:7,0:7:21.07:0,21,1610	0/0:8,0:8:18.06:0,18,1959	0/0:2,0:2:6.02:0,6,76	0/0:3,0:3:9.03:0,9,848	0/0:2,0:2:6.02:0,6,396	0/0:6,0:6:18.06:0,18,1633	0/0:3,0:3:9.02:0,9,187	0/0:28,0:27:78.27:0,78,7604	1/1:0,5:5:9.03:432,9,0	0/0:6,0:6:18.06:0,18,984	0/0:7,0:7:21.07:0,21,2697	0/0:7,0:7:21.07:0,21,2399	./.	0/0:2,0:2:6.02:0,6,652	0/0:1,0:1:3.01:0,3,336	0/0:9,0:9:27.08:0,27,2979	0/0:2,0:1:3.01:0,3,224	0/0:6,0:6:15.05:0,15,1300	0/0:8,0:8:12.04:0,12,419
chr10	98820666	.	ATG	A	261.07	PASS	AB=0.956;AC=15;AF=0.313;AN=48;BaseQRankSum=7.187;DP=201;FS=0.000;HRun=0;HaplotypeScore=47.4244;InbreedingCoeff=0.1835;MQ=64.47;MQ0=4;MQRankSum=-1.584;QD=2.61;ReadPosRankSum=0.477;VQSLOD=1.1456;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:4:12.03:0,12,198	./.	0/0:11,0:4:2.60:0,3,10	0/1:5,0:5:2.57:3,0,112	0/1:20,0:20:36.72:37,0,174	0/0:5,0:5:15.02:0,15,221	0/1:16,0:13:25.18:174,0,25	0/0:5,0:5:15.02:0,15,200	0/0:8,0:8:4.28:0,4,193	0/0:10,0:10:23.69:0,24,307	./.	0/0:5,0:5:15.02:0,15,198	0/0:1,0:1:3.01:0,3,50	0/0:7,0:7:9.47:0,9,178	1/1:3,0:3:6:51,6,0	0/1:28,1:28:1.48:1,0,836	1/1:5,0:5:7.03:27,7,0	0/1:5,3:7:40.90:41,0,82	0/0:8,0:8:23.98:0,24,353	0/0:7,0:7:21.06:0,21,368	./.	0/1:2,0:2:5.69:6,0,19	0/1:2,0:2:14.50:15,0,18	0/0:11,0:11:21.35:0,21,398	1/1:3,0:2:4.53:14,5,0	0/0:5,0:5:15.02:0,15,212	1/1:7,0:7:2.04:34,2,0
chr10	98820676	.	GTA	G	35.49	PASS	AB=0.910;AC=8;AF=0.167;AN=48;BaseQRankSum=2.766;DP=218;FS=0.000;HRun=0;HaplotypeScore=48.7089;InbreedingCoeff=0.0542;MQ=59.14;MQ0=5;MQRankSum=-0.296;QD=0.67;ReadPosRankSum=0.873;VQSLOD=1.1541;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:4:12.03:0,12,172	./.	./.	0/1:6,2:8:56.30:56,0,140	0/0:22,0:22:35.05:0,35,501	0/0:5,0:5:12.01:0,12,147	0/0:18,0:15:23.48:0,23,172	0/0:5,0:5:15.05:0,15,236	0/0:8,0:8:12.04:0,12,189	0/1:10,0:10:15.70:16,0,242	0/0:1,0:1:3.01:0,3,49	0/0:5,0:5:12.04:0,12,189	0/1:3,0:3:27.93:28,0,80	0/0:6,0:6:15.02:0,15,195	./.	0/0:27,0:27:66.13:0,66,1006	1/1:6,0:6:2.41:13,2,0	0/0:10,0:9:18.06:0,18,273	0/1:9,1:10:7.07:7,0,403	0/0:10,0:9:24.07:0,24,359	0/0:1,0:1:3.01:0,3,43	0/0:4,0:4:12.04:0,12,184	0/0:3,0:3:8.96:0,9,110	0/1:10,1:11:4.08:4,0,434	0/1:4,1:4:3.93:28,0,4	0/0:6,0:6:18.06:0,18,291	0/0:4,0:4:1.14:0,1,3
chr10	98820689	.	T	TTAGAG	151.36	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=2.950;DP=282;FS=2.318;HRun=0;HaplotypeScore=79.4213;InbreedingCoeff=0.6227;MQ=59.74;MQ0=5;MQRankSum=-3.008;QD=7.21;ReadPosRankSum=-0.728;VQSLOD=1.9264;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,6:15:4.42:60,4,0	0/0:6,0:6:15.04:0,15,303	0/0:7,0:4:6.01:0,6,58	0/0:16,0:4:2.97:0,3,67	0/0:10,0:10:30.08:0,30,548	0/0:26,0:26:69.18:0,69,1441	0/0:7,0:7:21.05:0,21,357	0/0:18,0:15:42.92:0,43,629	0/0:8,0:8:21.04:0,21,399	0/0:9,0:9:24.06:0,24,458	0/0:11,0:11:30.09:0,30,582	0/0:2,0:2:6.01:0,6,95	0/0:7,0:7:21.06:0,21,423	0/0:7,0:7:15.05:0,15,297	0/0:8,0:8:24.05:0,24,446	./.	0/0:27,0:27:75.26:0,75,1631	1/1:5,1:6:8.86:191,9,0	0/0:9,0:8:18.06:0,18,419	0/0:13,0:13:36.12:0,36,808	0/0:10,0:9:24.08:0,24,557	0/0:3,0:3:9.02:0,9,145	0/0:5,0:5:15.05:0,15,349	0/0:4,0:4:12.04:0,12,258	0/0:18,0:18:51.14:0,51,963	0/0:6,0:5:12.04:0,12,214	0/0:12,0:11:36.07:0,36,677	0/0:5,0:5:6.02:0,6,89
chr10	98820695	.	GAGAGACACACAC	G	647.21	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=6.773;DP=323;FS=0.943;HRun=0;HaplotypeScore=123.1751;InbreedingCoeff=0.4458;MQ=58.23;MQ0=5;MQRankSum=-7.537;QD=10.11;ReadPosRankSum=-0.582;VQSLOD=2.1693;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:5.24:5,0,248	0/0:6,0:6:15.05:0,15,710	0/0:13,0:5:13.59:0,14,422	0/0:22,0:6:12.51:0,13,416	0/0:11,0:11:33.11:0,33,1657	0/0:26,0:26:72.18:0,72,3733	0/0:6,0:6:15.05:0,15,803	1/1:16,0:15:41.83:422,42,0	0/0:9,0:9:27.09:0,27,1467	0/0:7,0:7:21.06:0,21,905	0/0:9,0:9:21.07:0,21,1014	0/0:3,0:3:9.03:0,9,542	0/0:9,0:9:27.09:0,27,1478	0/0:9,0:9:21.07:0,21,1112	0/0:8,0:8:18.06:0,18,1018	./.	0/0:28,0:28:72.25:0,72,3380	0/1:14,0:14:38.87:39,0,330	0/0:9,0:9:27.09:0,27,1133	0/0:13,0:13:39.13:0,39,1709	0/0:15,0:14:39.13:0,39,1757	0/0:4,0:4:12.04:0,12,669	0/0:6,0:6:18.06:0,18,895	0/0:8,0:8:24.08:0,24,1310	0/0:19,0:19:54.19:0,54,2803	0/1:5,0:5:43.83:197,0,44	0/0:14,0:13:42.14:0,42,2243	1/1:4,0:4:6.02:114,6,0
chr10	98820697	.	GAGACACACAC	G	615.20	PASS	AB=0.867;AC=7;AF=0.130;AN=54;BaseQRankSum=6.259;DP=326;FS=0.000;HRun=0;HaplotypeScore=113.2102;InbreedingCoeff=0.4528;MQ=58.20;MQ0=6;MQRankSum=-6.775;QD=9.32;ReadPosRankSum=-1.153;VQSLOD=2.1418;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:4.96:5,0,247	0/0:6,0:6:15.05:0,15,714	0/0:16,0:6:17.98:0,18,615	0/0:22,0:7:15.52:0,16,549	0/0:11,0:11:33.11:0,33,1569	0/0:26,0:26:72.23:0,72,3415	0/0:6,0:6:18.06:0,18,882	1/1:15,1:15:24.66:384,25,0	0/0:9,0:9:27.09:0,27,1373	0/0:7,0:7:21.06:0,21,875	0/0:8,0:8:21.07:0,21,1010	0/0:3,0:3:9.03:0,9,472	0/0:9,0:9:27.09:0,27,1300	0/0:9,0:9:21.07:0,21,989	0/0:7,0:7:18.06:0,18,935	./.	0/0:26,0:26:72.25:0,72,3446	0/1:15,0:15:24.95:25,0,331	0/0:9,0:9:27.09:0,27,1099	0/0:14,0:14:42.14:0,42,1911	0/0:17,0:16:48.16:0,48,2140	0/0:4,0:4:12.04:0,12,608	0/0:6,0:6:18.06:0,18,899	0/0:8,0:8:24.08:0,24,1203	0/0:18,0:18:54.19:0,54,2640	0/1:2,4:6:65.33:235,0,65	0/0:14,0:13:42.14:0,42,2045	1/1:2,2:4:5.99:96,6,0
chr10	98820989	.	GTGGTTT	G	1136.85	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=6.674;DP=528;FS=0.000;HRun=0;HaplotypeScore=109.0152;InbreedingCoeff=0.9842;MQ=73.85;MQ0=2;MQRankSum=-4.317;QD=20.30;ReadPosRankSum=0.617;VQSLOD=3.2327;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:66.21:0,66,2011	0/0:6,0:6:18.06:0,18,596	0/0:27,0:23:36:0,36,629	0/0:15,0:13:24.08:0,24,659	0/0:31,0:31:73.49:0,73,2268	0/0:21,0:21:51.16:0,51,1615	0/0:25,0:25:51.18:0,51,1687	1/1:15,7:22:21.06:351,21,0	0/0:20,0:20:51.18:0,51,1622	0/0:15,0:15:36.12:0,36,1132	0/0:11,0:11:30.10:0,30,986	0/0:21,0:21:54.19:0,54,1760	0/0:19,0:19:42.14:0,42,1313	0/0:7,0:7:15.05:0,15,401	0/0:20,0:20:51.18:0,51,1687	1/1:9,13:22:27.09:546,27,0	0/0:31,0:31:60.21:0,60,1885	0/0:20,0:20:39.13:0,39,1203	0/0:21,0:21:33.11:0,33,1050	0/0:21,0:21:45.15:0,45,1416	0/0:25,0:25:48.16:0,48,1565	0/0:16,0:16:45.15:0,45,1489	0/0:19,0:18:48.16:0,48,1564	0/0:18,0:18:39.13:0,39,1292	0/0:9,0:9:21.07:0,21,680	1/1:6,6:12:18.06:380,18,0	0/0:20,0:20:45.15:0,45,1460	./.
chr10	98821137	.	C	CCT	5301.90	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.669;DP=598;FS=10.480;HRun=0;HaplotypeScore=83.4216;InbreedingCoeff=0.9816;MQ=77.22;MQ0=0;MQRankSum=-4.820;QD=43.10;ReadPosRankSum=-0.324;VQSLOD=5.7302;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:37:69.22:1288,69,0	0/0:12,0:12:36.12:0,36,530	0/0:16,0:16:42.14:0,42,597	0/0:22,0:22:51.56:0,52,700	0/0:25,0:25:71.92:0,72,1059	0/0:23,0:23:69.23:0,69,1015	0/0:30,0:30:87.24:0,87,1235	1/1:4,15:19:48.16:866,48,0	0/0:17,0:17:48.14:0,48,706	0/0:20,0:20:57.19:0,57,839	0/0:21,0:21:57.19:0,57,838	0/0:26,0:26:78.26:0,78,1149	0/0:18,0:18:51.17:0,51,751	0/0:15,0:15:36.12:0,36,530	0/0:23,0:23:63.18:0,63,886	1/1:1,17:20:45.15:842,45,0	0/0:35,0:35:99:0,99,1417	1/1:1,18:20:54.19:1011,54,0	0/0:18,0:18:54.18:0,54,791	0/0:19,0:19:57.17:0,57,817	0/0:31,0:31:87.28:0,87,1258	0/0:26,0:26:75.23:0,75,1066	0/0:16,0:16:48.14:0,48,684	0/0:28,0:28:78.22:0,78,1122	0/0:14,0:14:42.14:0,42,617	1/1:3,16:19:6.98:845,7,0	0/0:20,0:20:54.18:0,54,792	1/1:0,8:8:24.08:449,24,0
chr10	98821252	.	GAC	G	646.28	PASS	AB=0.979;AC=13;AF=0.232;AN=56;BaseQRankSum=10.917;DP=673;FS=10.451;HRun=0;HaplotypeScore=95.7291;InbreedingCoeff=0.4356;MQ=51.42;MQ0=45;MQRankSum=-3.936;QD=3.67;ReadPosRankSum=-0.985;VQSLOD=1.6013;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,1:24:11.95:92,12,0	0/0:7,0:7:7.73:0,8,266	0/1:7,0:2:10.97:11,0,52	0/0:17,0:2:2.98:0,3,22	0/0:36,0:33:37.46:0,37,773	0/0:33,0:31:39.77:0,40,948	0/0:31,0:27:31.98:0,32,650	1/1:26,1:24:50.58:340,51,0	0/0:17,0:17:28.56:0,29,432	0/0:26,0:24:16.36:0,16,686	0/0:23,0:23:26.15:0,26,605	0/0:30,0:27:35.59:0,36,888	0/1:29,1:30:11.07:11,0,850	0/0:10,0:10:10.04:0,10,296	0/0:27,0:23:54.53:0,55,846	1/1:18,2:16:9.63:128,10,0	0/1:35,0:35:4.24:4,0,138	0/1:12,1:12:34.62:88,0,35	0/0:21,0:16:30.59:0,31,367	0/0:34,0:33:44.66:0,45,848	0/0:55,0:53:77.47:0,77,1627	0/0:25,0:25:50.81:0,51,721	0/0:22,0:18:10.41:0,10,432	0/0:38,0:35:38.75:0,39,1125	0/0:20,0:20:28.11:0,28,643	0/1:15,0:12:6.20:124,0,6	0/0:25,0:24:56.08:0,56,917	1/1:3,0:2:2.22:7,2,0
chr10	98821304	.	GAGAGAGAGAGAC	G	1724.32	PASS	AB=0.734;AC=9;AF=0.173;AN=52;BaseQRankSum=11.963;DP=635;FS=0.000;HRun=0;HaplotypeScore=220.6810;InbreedingCoeff=0.5859;MQ=52.42;MQ0=35;MQRankSum=-3.488;QD=14.49;ReadPosRankSum=-5.189;VQSLOD=1.2665;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:21:20.94:260,21,0	0/0:8,0:8:21.07:0,21,926	./.	./.	0/0:39,0:37:92.72:0,93,2490	0/0:25,0:22:60.19:0,60,2040	0/0:35,0:31:75.24:0,75,2311	0/1:14,24:32:94.70:836,0,95	0/0:22,0:22:54.17:0,54,1757	0/0:21,0:20:45.15:0,45,1371	0/0:22,0:20:34.03:0,34,963	0/0:31,0:28:75.24:0,75,2674	0/0:26,0:26:66.21:0,66,2423	0/0:15,0:15:36.12:0,36,1227	0/0:29,0:28:78.25:0,78,2434	1/1:16,0:13:17.83:158,18,0	0/0:31,0:31:57.93:0,58,2272	0/1:12,0:11:15.14:108,0,15	0/0:19,0:16:36.08:0,36,942	0/0:30,0:28:61.20:0,61,2438	0/0:38,0:34:71.86:0,72,1862	0/0:21,0:20:54.19:0,54,1951	0/0:27,0:23:60.21:0,60,2316	0/0:36,0:34:75.05:0,75,2505	0/0:15,0:15:42.14:0,42,1598	0/1:7,16:20:82.80:416,0,83	0/0:26,0:25:72.19:0,72,2449	1/1:7,0:7:11.60:99,12,0
chr10	98821448	.	G	GGTCT	3404.96	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.438;DP=749;FS=21.272;HRun=0;HaplotypeScore=126.3979;InbreedingCoeff=0.9979;MQ=79.98;MQ0=0;MQRankSum=-4.034;QD=61.91;ReadPosRankSum=1.308;VQSLOD=3.5698;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:35:87.30:2206,87,0	0/0:17,0:17:45.15:0,45,833	0/0:25,0:25:66.22:0,66,1170	0/0:25,0:26:51.04:0,51,812	0/0:36,0:36:99:0,102,1808	0/0:27,0:27:78.27:0,78,1448	0/0:30,0:30:87.27:0,87,1524	0/0:39,0:38:99:0,99,1656	0/0:29,0:29:72.23:0,72,1286	0/0:39,0:39:99:0,108,1944	0/0:22,0:22:54.18:0,54,980	0/0:21,0:21:63.22:0,63,1176	0/0:24,0:24:72.24:0,72,1314	0/0:19,0:19:51.17:0,51,952	0/0:35,0:35:99:0,102,1814	0/0:23,0:23:63.22:0,63,1176	0/0:21,0:21:60.21:0,60,1120	1/1:2,17:20:45.15:1199,45,0	0/0:17,0:17:45.15:0,45,831	0/0:33,0:33:93.30:0,93,1671	0/0:44,0:44:99:0,120,2203	0/0:35,0:35:99:0,105,1903	0/0:29,0:29:78.21:0,78,1383	0/0:15,0:15:45.14:0,45,810	0/0:20,0:20:57.20:0,57,1057	0/0:28,0:28:81.25:0,81,1448	0/0:31,0:31:87.27:0,87,1554	0/0:9,0:9:21.07:0,21,392
chr10	98821930	.	AGGAACAAGT	A	9505.55	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.282;DP=660;FS=3.402;HRun=0;HaplotypeScore=189.8290;InbreedingCoeff=0.9993;MQ=87.88;MQ0=0;MQRankSum=-14.009;QD=80.56;ReadPosRankSum=-2.514;VQSLOD=4.4936;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,33:36:90.31:2629,90,0	0/0:13,0:13:39.13:0,39,1931	0/0:22,0:22:63.22:0,63,2583	0/0:29,0:29:76.53:0,77,3479	0/0:14,0:14:42.14:0,42,1987	0/0:22,0:22:66.23:0,66,3160	0/0:29,0:29:87.29:0,87,3939	1/1:1,25:26:75.23:2088,75,0	0/0:24,0:24:69.24:0,69,3186	0/0:26,0:26:78.27:0,78,3663	0/0:13,0:13:39.12:0,39,1672	0/0:38,0:38:99:0,114,5246	0/0:22,0:22:66.23:0,66,3254	0/0:23,0:23:69.24:0,69,3312	0/0:38,0:38:99:0,111,5184	1/1:1,18:19:54.19:1689,54,0	0/0:55,0:55:99:0,163,7656	1/1:1,10:11:27.09:850,27,0	0/0:19,0:19:57.18:0,57,2218	0/0:19,0:19:54.18:0,54,2470	0/0:42,0:42:99:0,126,5905	0/0:20,0:20:57.20:0,57,2797	0/0:12,0:11:33.10:0,33,1454	0/0:23,0:23:66.23:0,66,3258	0/0:17,0:17:51.18:0,51,2493	1/1:0,17:17:51.16:1491,51,0	0/0:22,0:22:66.23:0,66,3245	1/1:1,8:9:24.08:759,24,0
chr10	98822961	.	T	TTG	188.10	PASS	AB=0.897;AC=8;AF=0.148;AN=54;BaseQRankSum=10.489;DP=606;FS=42.335;HRun=0;HaplotypeScore=194.7284;InbreedingCoeff=-0.1545;MQ=46.54;MQ0=4;MQRankSum=-6.677;QD=1.02;ReadPosRankSum=3.319;VQSLOD=1.5230;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:51.12:0,51,745	0/0:6,0:6:14.79:0,15,229	0/0:31,0:8:21.95:0,22,291	0/0:36,0:17:35.77:0,36,457	0/1:11,8:19:99:128,0,218	0/1:28,1:29:7.80:8,0,556	0/0:27,0:27:32.29:0,32,986	0/0:11,0:9:17.86:0,18,217	0/0:22,0:22:62.57:0,63,911	0/1:24,5:29:99:102,0,698	0/0:18,2:20:11.04:0,11,485	0/1:20,0:20:7.84:8,0,496	0/0:26,0:27:28.26:0,28,972	0/0:30,1:31:32.66:0,33,937	0/1:24,0:24:45.61:46,0,599	0/0:29,1:30:29.15:0,29,911	0/0:18,0:18:35.93:0,36,662	0/1:13,1:14:7.99:8,0,469	0/0:16,0:15:44.49:0,44,615	0/1:23,4:27:5.71:6,0,640	0/0:14,0:14:35.66:0,36,515	0/0:18,2:20:30.91:0,31,631	0/0:28,1:29:58.96:0,59,904	0/0:18,0:18:35.89:0,36,696	0/1:18,4:22:3.28:3,0,590	0/0:26,2:28:22.95:0,23,903	0/0:15,1:16:13.84:0,14,501	./.
chr10	98822965	.	T	TCA	1271.59	PASS	AB=0.873;AC=10;AF=0.185;AN=54;BaseQRankSum=9.707;DP=603;FS=46.841;HRun=0;HaplotypeScore=181.4489;InbreedingCoeff=-0.2530;MQ=47.26;MQ0=4;MQRankSum=-6.030;QD=5.81;ReadPosRankSum=2.765;VQSLOD=1.6047;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.10:0,57,875	0/0:7,0:7:18.01:0,18,240	0/0:32,0:12:30.93:0,31,382	0/0:32,0:16:35.44:0,35,451	0/1:11,7:18:99:377,0,255	0/1:23,2:26:88.03:88,0,694	0/0:29,0:29:25.24:0,25,1088	0/0:10,0:8:14.83:0,15,220	0/0:22,0:22:66.17:0,66,1021	0/1:22,6:28:99:276,0,711	0/1:18,2:20:63.28:63,0,514	0/0:18,1:19:0.88:0,1,617	0/0:26,0:26:46.87:0,47,1036	0/0:31,1:32:27.74:0,28,1172	0/0:23,0:23:26.58:0,27,734	0/0:29,1:30:11.29:0,11,1059	0/0:19,0:19:57.03:0,57,838	0/1:14,1:15:63.92:64,0,499	0/0:18,0:16:43.29:0,43,610	0/1:19,5:25:99:269,0,787	0/0:13,0:13:35.88:0,36,500	0/1:18,2:20:70.38:70,0,612	0/0:28,1:29:2.18:0,2,907	0/0:18,0:18:51.12:0,51,801	0/1:19,3:23:99:158,0,532	0/1:27,2:29:33.51:34,0,1022	0/1:14,1:15:13.03:13,0,577	./.
chr10	98823123	.	CT	C	2585.01	PASS	AB=0.923;AC=13;AF=0.232;AN=56;BaseQRankSum=9.390;DP=602;FS=1.671;HRun=11;HaplotypeScore=74.0374;InbreedingCoeff=0.8783;MQ=61.66;MQ0=0;MQRankSum=1.586;QD=18.33;ReadPosRankSum=-0.828;VQSLOD=4.3270;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:74.83:615,75,0	0/0:9,0:9:27.07:0,27,288	0/1:11,1:11:21.21:21,0,143	0/0:7,0:6:6.01:0,6,61	0/0:32,2:34:27.76:0,28,697	0/0:21,1:23:29.32:0,29,498	0/0:25,1:26:44.46:0,44,665	1/1:4,16:20:47.94:394,48,0	0/0:24,1:26:31.62:0,32,563	0/0:24,0:26:59.82:0,60,601	0/0:11,0:12:20.13:0,20,225	0/0:25,1:29:56.30:0,56,764	0/0:24,0:24:63.13:0,63,652	0/0:28,1:29:47.52:0,48,697	0/0:21,0:21:57.14:0,57,601	1/1:2,26:28:71.91:591,72,0	0/0:24,0:24:60.12:0,60,623	1/1:1,21:23:61.97:498,62,0	0/0:30,0:31:59.30:0,59,657	0/0:14,0:14:29.93:0,30,292	0/0:26,2:28:47.54:0,48,711	0/0:17,0:17:39.10:0,39,415	0/0:16,0:17:38.93:0,39,396	0/0:23,0:23:57.11:0,57,591	0/0:13,0:12:36:0,36,354	1/1:2,22:24:36.92:507,37,0	0/0:25,3:28:25.85:0,26,664	1/1:0,6:6:17.98:148,18,0
chr10	98823641	.	G	GT	1347.66	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.999;DP=489;FS=0.587;HRun=8;HaplotypeScore=49.3123;InbreedingCoeff=0.9675;MQ=67.66;MQ0=0;MQRankSum=0.221;QD=23.64;ReadPosRankSum=-0.748;VQSLOD=3.6788;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:77.78:0,78,698	0/0:3,0:3:9:0,9,82	0/0:11,0:10:17.18:0,17,129	0/0:14,0:13:23.82:0,24,161	0/0:30,0:30:90.05:0,90,823	0/0:20,0:20:57.03:0,57,522	0/0:19,0:19:51.01:0,51,467	1/1:5,19:26:59.81:624,60,0	0/0:14,0:14:35.99:0,36,325	0/0:16,0:16:45.02:0,45,412	0/0:13,0:13:32.99:0,33,294	0/0:12,0:12:36.01:0,36,325	0/0:16,0:16:48.01:0,48,434	0/0:16,0:16:42:0,42,378	0/0:13,0:13:39.01:0,39,353	0/0:6,0:6:14.99:0,15,133	0/0:26,0:26:75.01:0,75,680	0/0:19,0:19:51.02:0,51,467	0/0:21,0:21:48.01:0,48,439	0/0:24,0:24:72.03:0,72,654	0/0:22,0:22:63.01:0,63,571	0/0:8,0:8:21.01:0,21,192	0/0:13,0:13:39.02:0,39,356	0/0:27,0:27:74.99:0,75,678	0/0:17,0:17:48.03:0,48,439	1/1:2,18:21:51.15:589,51,0	0/0:22,0:22:63.03:0,63,576	1/1:1,9:10:24.07:277,24,0
chr10	98825255	.	T	TA	4931.17	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-13.213;DP=585;FS=2.824;HRun=0;HaplotypeScore=52.2979;InbreedingCoeff=0.9987;MQ=81.43;MQ0=0;MQRankSum=-0.666;QD=40.42;ReadPosRankSum=0.164;VQSLOD=5.1433;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:78.27:1242,78,0	0/0:7,0:7:21.06:0,21,278	0/0:18,0:18:45.32:0,45,626	0/0:16,0:16:41.97:0,42,465	0/0:27,0:27:78.20:0,78,1032	0/0:20,0:20:60.20:0,60,832	0/0:36,0:36:99:0,108,1441	1/1:1,35:36:99:1436,102,0	0/0:20,0:20:60.19:0,60,821	0/0:21,0:21:63.20:0,63,852	0/0:24,0:24:72.16:0,72,963	0/0:13,0:13:39.13:0,39,544	0/0:21,0:21:63.18:0,63,858	0/0:17,0:17:51.17:0,51,712	0/0:15,0:15:45.12:0,45,592	1/1:0,13:13:24.08:383,24,0	0/0:13,0:13:36.09:0,36,483	1/1:0,15:15:39.13:622,39,0	0/0:19,0:19:57.19:0,57,788	0/0:42,0:42:99:0,126,1688	0/0:15,0:15:45.14:0,45,612	0/0:27,0:27:81.21:0,81,1050	0/0:29,0:29:84.25:0,84,1136	0/0:16,0:16:48.14:0,48,638	0/0:26,0:26:78.25:0,78,1059	1/1:0,14:14:42.12:626,42,0	0/0:21,0:21:63.18:0,63,835	1/1:0,14:14:39.13:622,39,0
chr10	98825641	.	CCA	C	1567.38	PASS	AB=0.944;AC=12;AF=0.214;AN=56;BaseQRankSum=10.533;DP=719;FS=0.000;HRun=0;HaplotypeScore=94.8936;InbreedingCoeff=0.8052;MQ=62.87;MQ0=2;MQRankSum=-4.370;QD=11.44;ReadPosRankSum=2.210;VQSLOD=3.4295;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,28:39:69.20:842,69,0	0/0:11,0:11:27.08:0,27,404	0/0:27,0:19:36.09:0,36,489	0/0:30,0:23:39.39:0,39,491	0/0:16,0:15:33.04:0,33,491	0/0:20,0:20:45.12:0,45,657	0/0:42,0:42:99:0,108,1579	1/1:10,0:20:25.68:131,26,0	0/0:33,1:34:39.04:0,39,1042	0/0:26,0:25:54.13:0,54,793	0/0:13,0:13:26.92:0,27,350	0/0:35,0:35:78.18:0,78,1115	0/0:27,1:28:26.52:0,27,835	0/0:30,0:30:38.73:0,39,1053	0/0:33,0:32:90.02:0,90,1229	0/1:20,0:20:4.85:5,0,197	0/0:33,0:33:90.19:0,90,1271	1/1:4,18:22:39.12:476,39,0	0/0:10,0:10:21.05:0,21,286	0/0:16,0:16:33.09:0,33,496	0/0:60,0:60:99:0,138,1906	0/0:22,0:22:48.14:0,48,725	0/1:7,1:8:24.63:25,0,109	0/0:48,0:49:99:0,109,1793	0/0:21,0:21:29.19:0,29,478	1/1:5,0:22:40.24:197,40,0	0/0:26,0:26:66.17:0,66,996	1/1:2,0:6:14.20:70,14,0
chr10	98825642	.	CA	C	386.98	PASS	AB=0.967;AC=7;AF=0.125;AN=56;BaseQRankSum=12.799;DP=720;FS=0.000;HRun=1;HaplotypeScore=85.3233;InbreedingCoeff=0.1459;MQ=63.54;MQ0=2;MQRankSum=-4.111;QD=3.10;ReadPosRankSum=2.494;VQSLOD=-0.0729;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:38,1:39:72.87:185,0,73	0/0:11,0:11:30.07:0,30,385	0/0:30,0:22:51.09:0,51,589	0/0:30,0:23:49.20:0,49,593	0/0:16,0:15:45.93:0,46,536	0/0:21,0:21:54.11:0,54,666	0/0:42,0:42:99:0,123,1560	0/1:18,0:18:37.36:37,0,71	0/0:33,0:33:85.75:0,86,1119	0/0:25,0:24:63.12:0,63,780	0/0:13,0:13:24.49:0,24,317	0/0:35,0:35:96.09:0,96,1114	0/0:28,0:28:57:0,57,824	0/0:32,0:32:76.29:0,76,1035	0/0:34,0:33:94.55:0,95,1172	0/1:17,2:19:63.01:125,0,63	0/0:33,0:33:99:0,99,1201	0/1:21,0:21:33.82:94,0,34	0/0:8,0:8:23.53:0,24,253	0/0:15,0:15:45.04:0,45,537	0/0:61,1:62:99:0,138,1860	0/0:23,0:23:57.09:0,57,699	0/0:9,0:9:4.05:0,4,122	0/0:48,1:49:99:0,132,1696	0/0:20,0:20:44.16:0,44,545	0/1:21,0:22:36.98:37,0,42	0/0:26,0:26:78.14:0,78,958	1/1:5,0:6:10.76:41,11,0
chr10	98826841	.	G	GT	841.08	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=2.134;DP=598;FS=8.467;HRun=11;HaplotypeScore=82.4825;InbreedingCoeff=0.7061;MQ=74.03;MQ0=6;MQRankSum=-7.554;QD=7.79;ReadPosRankSum=-3.858;VQSLOD=1.2484;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:48.98:0,49,410	0/0:7,0:7:17.84:0,18,132	0/0:48,0:24:0.68:0,1,93	0/1:30,0:17:3.04:3,0,64	0/0:25,0:26:24.56:0,25,330	0/0:21,0:22:58.82:0,59,447	0/0:15,0:15:35.80:0,36,276	1/1:15,15:31:47.47:432,47,0	0/0:17,0:17:23.24:0,23,302	0/0:18,0:18:32.82:0,33,255	0/0:21,0:21:41.55:0,42,306	0/0:17,0:17:50.67:0,51,380	0/0:24,0:25:65.64:0,66,491	0/0:12,0:12:22.26:0,22,165	0/0:17,0:17:32.78:0,33,250	0/1:16,0:15:1.34:1,0,107	0/0:25,0:25:50.66:0,51,380	0/0:31,0:31:65.64:0,66,492	0/0:24,0:23:42.98:0,43,306	0/0:19,0:19:8.32:0,8,245	0/0:15,0:16:34.89:0,35,259	0/0:9,0:9:17.92:0,18,137	0/0:23,0:23:17.76:0,18,315	0/0:19,0:19:56.78:0,57,441	0/0:16,0:16:39.71:0,40,317	1/1:12,10:23:34.75:399,35,0	0/0:34,0:34:49.57:0,50,558	1/1:4,4:8:10.73:144,11,0
chr10	98826858	.	T	TTTTTC	5114.81	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=0.184;DP=604;FS=5.666;HRun=0;HaplotypeScore=126.0443;InbreedingCoeff=0.7162;MQ=75.48;MQ0=6;MQRankSum=-6.534;QD=34.79;ReadPosRankSum=2.209;VQSLOD=4.5590;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:35:60.19:1683,60,0	0/0:7,0:7:18.04:0,18,315	0/0:45,0:20:24.51:0,25,237	0/0:33,0:22:5.85:0,6,284	0/0:25,0:25:58.36:0,58,1008	0/0:25,0:25:72.20:0,72,1226	0/0:21,0:21:57.15:0,57,934	0/1:32,0:32:99:507,0,241	0/0:16,0:16:38.60:0,39,646	0/0:20,0:20:51.11:0,51,826	0/0:24,0:24:57.09:0,57,917	0/0:19,0:19:48.08:0,48,691	0/0:22,0:22:57.05:0,57,851	0/0:14,0:14:36.08:0,36,563	0/0:11,0:11:24.07:0,24,406	1/1:3,11:14:27.09:735,27,0	0/0:21,0:21:51.12:0,51,858	1/1:6,20:29:51.16:1447,51,0	0/0:22,0:21:31.90:0,32,788	0/0:18,0:18:44.92:0,45,738	0/0:13,0:13:33.11:0,33,631	0/0:6,0:6:9.03:0,9,175	0/0:25,0:25:57.14:0,57,944	0/0:19,0:19:57.15:0,57,1010	0/0:19,0:19:54:0,54,838	0/1:27,0:27:99:495,0,135	0/0:31,0:31:71.04:0,71,1273	1/1:8,0:8:13.69:248,14,0
chr10	98829370	.	CT	C	3946.83	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.681;DP=609;FS=1.185;HRun=6;HaplotypeScore=61.9050;InbreedingCoeff=0.9988;MQ=85.44;MQ0=0;MQRankSum=-2.811;QD=27.03;ReadPosRankSum=1.022;VQSLOD=4.1014;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:87.22:935,87,0	0/0:11,0:11:27.09:0,27,355	0/0:15,0:15:32.81:0,33,381	0/0:26,0:26:42.51:0,43,666	0/0:26,0:26:78.24:0,78,1010	0/0:18,0:18:51.16:0,51,658	0/0:26,0:26:75.24:0,75,974	1/1:6,29:35:87.17:911,87,0	0/0:19,0:19:54.12:0,54,673	0/0:22,0:22:66.21:0,66,853	0/0:19,0:19:51.15:0,51,656	0/0:21,0:21:63.19:0,63,814	0/0:18,0:18:48.14:0,48,617	0/0:32,0:32:90.24:0,90,1125	0/0:20,0:20:57.16:0,57,721	1/1:2,12:14:33.03:341,33,0	0/0:30,0:30:87.26:0,87,1128	1/1:2,21:23:20.75:573,21,0	0/0:24,0:24:60.14:0,60,756	0/0:19,0:19:54.18:0,54,710	0/0:22,0:22:66.20:0,66,854	0/0:15,0:15:36.12:0,36,474	0/0:18,0:18:51.16:0,51,657	0/0:24,0:24:69.18:0,69,889	0/0:19,0:19:51.13:0,51,641	1/1:3,22:25:68.96:704,69,0	0/0:19,0:19:57.17:0,57,736	1/1:0,16:16:45.11:483,45,0
chr10	98829917	.	AAAC	A	4946.46	PASS	AB=0.548;AC=11;AF=0.196;AN=56;BaseQRankSum=13.522;DP=753;FS=1.670;HRun=0;HaplotypeScore=108.0517;InbreedingCoeff=0.9174;MQ=71.73;MQ0=0;MQRankSum=-1.688;QD=33.20;ReadPosRankSum=-1.154;VQSLOD=4.9988;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,43:51:99:1635,112,0	0/0:11,0:11:30.10:0,30,613	0/0:32,0:28:60.20:0,60,1170	0/0:29,0:28:64.10:0,64,1229	0/0:18,0:18:36.12:0,36,740	0/0:24,0:24:60.19:0,60,1225	0/0:30,0:30:75.26:0,75,1519	1/1:4,22:26:66.21:973,66,0	0/0:19,0:19:54.17:0,54,1081	0/0:28,0:28:72.24:0,72,1428	0/0:15,0:15:42.14:0,42,878	0/0:30,0:30:81.26:0,81,1668	0/0:27,0:27:75.20:0,75,1467	0/0:25,0:25:69.24:0,69,1435	0/0:31,0:31:75.26:0,75,1579	1/1:4,22:26:63.20:928,63,0	0/0:32,0:32:90.31:0,90,1876	1/1:4,13:17:17.96:437,18,0	0/0:30,0:30:75.21:0,75,1466	0/0:21,0:21:54.18:0,54,1137	0/0:53,0:53:99:0,99,2901	0/0:21,0:21:51.16:0,51,1029	0/0:33,0:33:84.29:0,84,1768	0/0:45,0:45:99:0,117,2425	0/0:26,0:26:72.22:0,72,1417	0/1:4,19:23:3.03:794,0,3	0/0:24,0:24:66.23:0,66,1377	1/1:2,4:6:12.04:181,12,0
chr10	98830180	.	GC	G	5376.30	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.028;DP=664;FS=1.098;HRun=3;HaplotypeScore=75.5988;InbreedingCoeff=0.9977;MQ=80.04;MQ0=0;MQRankSum=-3.015;QD=32.19;ReadPosRankSum=-1.683;VQSLOD=4.2705;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,42:43:99:1487,120,0	0/0:8,0:8:24.08:0,24,345	0/0:29,0:29:84.26:0,84,1161	0/0:23,0:23:65.78:0,66,876	0/0:23,0:23:69.22:0,69,974	0/0:24,0:24:72.23:0,72,1014	0/0:29,0:29:84.27:0,84,1179	1/1:3,38:41:99:1311,108,0	0/0:15,0:15:45.14:0,45,628	0/0:28,0:28:81.27:0,81,1166	0/0:13,0:13:36.12:0,36,514	0/0:27,0:27:78.23:0,78,1069	0/0:22,0:22:66.22:0,66,945	0/0:18,0:18:54.16:0,54,756	0/0:26,0:26:78.26:0,78,1121	1/1:1,21:22:19.99:700,20,0	0/0:35,0:35:99:0,105,1510	1/1:2,28:30:69.22:852,69,0	0/0:21,0:21:57.18:0,57,802	0/0:17,0:17:48.15:0,48,671	0/0:26,0:26:75.25:0,75,1076	0/0:18,0:18:54.18:0,54,775	0/0:20,0:20:60.18:0,60,844	0/0:41,0:41:99:0,111,1576	0/0:15,0:15:45.13:0,45,628	1/1:1,21:22:63.18:766,63,0	0/0:19,0:19:54.15:0,54,739	1/1:0,9:9:21.07:260,21,0
chr10	98830407	.	C	CACGTAGTCA	14445.92	PASS	AB=0.622;AC=11;AF=0.196;AN=56;BaseQRankSum=15.001;DP=644;FS=1.211;HRun=0;HaplotypeScore=192.1509;InbreedingCoeff=0.8830;MQ=90.30;MQ0=0;MQRankSum=-15.618;QD=108.62;ReadPosRankSum=-1.642;VQSLOD=5.1060;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,16:30:81.15:3324,81,0	0/0:10,0:10:30.10:0,30,909	0/0:21,0:21:57.65:0,58,1620	0/0:34,0:34:75.19:0,75,2265	0/0:17,0:17:51.15:0,51,1334	0/0:12,0:12:36.12:0,36,1050	0/0:31,0:31:84.27:0,84,2497	1/1:22,5:31:84.27:3110,84,0	0/0:23,0:23:69.24:0,69,1972	0/0:30,0:30:87.24:0,87,2451	0/0:11,0:11:33.11:0,33,1004	0/0:33,0:33:96.33:0,96,2929	0/0:23,0:23:66.21:0,66,1969	0/0:28,0:28:84.29:0,84,2407	0/0:27,0:27:78.27:0,78,2399	1/1:7,12:20:48.03:2278,48,0	0/0:31,0:31:90.31:0,90,2602	1/1:9,12:23:60.16:2586,60,0	0/0:25,0:25:72.20:0,72,1962	0/0:17,0:17:48.16:0,48,1451	0/0:51,0:51:99:0,148,4453	0/0:12,0:12:33.11:0,33,1024	0/0:13,0:13:39.12:0,39,1056	0/0:24,0:24:72.23:0,72,2117	0/0:23,0:23:69.24:0,69,2067	0/1:9,13:23:32.91:2414,0,33	0/0:15,0:15:45.12:0,45,1258	1/1:1,5:6:15.05:734,15,0
chr10	98831155	.	GGTGT	G	3094.65	PASS	AB=0.745;AC=10;AF=0.179;AN=56;BaseQRankSum=10.867;DP=722;FS=7.898;HRun=0;HaplotypeScore=131.2763;InbreedingCoeff=0.7826;MQ=61.68;MQ0=33;MQRankSum=-6.618;QD=22.75;ReadPosRankSum=0.932;VQSLOD=3.0793;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:38,2:36:72.11:892,72,0	0/0:11,0:11:12.04:0,12,239	0/0:54,0:20:20.82:0,21,367	0/0:48,0:20:26.84:0,27,426	0/0:18,0:23:34.57:0,35,910	0/0:24,0:24:45.11:0,45,924	0/0:38,0:38:69.24:0,69,1599	1/1:13,12:22:48.16:799,48,0	0/0:21,0:21:36.11:0,36,791	0/0:21,0:19:27.01:0,27,519	0/0:11,0:11:26.88:0,27,602	0/0:24,0:23:47.95:0,48,1042	0/0:22,0:22:47.86:0,48,1054	0/0:32,0:29:57.20:0,57,1279	0/0:16,0:16:38.92:0,39,862	1/1:17,4:20:6.50:377,7,0	0/0:33,0:33:77.58:0,78,1627	0/1:13,13:25:0.61:705,0,1	0/0:20,0:18:39.06:0,39,807	0/0:11,0:12:23.75:0,24,528	0/0:66,0:63:99:0,146,3014	0/0:19,0:19:27.09:0,27,603	0/0:15,0:12:26.56:0,27,526	0/0:30,0:29:69.09:0,69,1606	0/0:23,0:23:47.83:0,48,1072	0/1:11,3:13:48.13:287,0,48	0/0:15,0:15:29.89:0,30,621	1/1:8,2:8:15.03:197,15,0
chr10	98831169	.	T	TG	1334.06	PASS	AB=0.895;AC=9;AF=0.161;AN=56;BaseQRankSum=11.041;DP=844;FS=11.933;HRun=1;HaplotypeScore=114.5513;InbreedingCoeff=0.8114;MQ=43.57;MQ0=152;MQRankSum=-5.810;QD=10.42;ReadPosRankSum=0.704;VQSLOD=0.4958;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:47,0:34:70.89:577,71,0	0/0:13,0:8:15.01:0,15,174	0/0:42,0:9:23.36:0,23,275	0/0:39,0:10:26.67:0,27,318	0/0:28,0:24:53.30:0,53,610	0/0:31,0:25:48.59:0,49,578	0/0:45,0:39:71.71:0,72,928	1/1:28,2:19:46.03:356,46,0	0/0:24,0:18:45.12:0,45,547	0/0:30,0:20:45.48:0,45,568	0/0:13,0:9:26.90:0,27,310	0/0:30,0:21:53.97:0,54,655	0/0:26,0:23:59.84:0,60,714	0/0:35,0:28:64.43:0,64,802	0/0:18,0:13:41.97:0,42,519	1/1:24,0:19:7.76:270,8,0	0/0:40,1:36:95.89:0,96,1142	0/0:27,0:23:5.61:0,6,141	0/0:26,0:17:45.01:0,45,558	0/0:17,0:14:26.57:0,27,325	0/0:93,0:75:99:0,171,2063	0/0:23,0:20:30.10:0,30,388	0/0:19,0:11:29.40:0,29,318	0/0:51,0:45:99:0,108,1370	0/0:27,0:23:56.67:0,57,704	0/1:15,1:11:48.33:163,0,48	0/0:17,0:16:30.91:0,31,397	1/1:9,1:5:14.79:127,15,0
chr10	98831170	.	GT	G	1455.27	PASS	AB=0.963;AC=11;AF=0.196;AN=56;BaseQRankSum=12.679;DP=842;FS=12.221;HRun=1;HaplotypeScore=111.8295;InbreedingCoeff=0.6630;MQ=43.02;MQ0=160;MQRankSum=-7.568;QD=7.42;ReadPosRankSum=2.429;VQSLOD=-0.2819;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,24:33:71.60:760,72,0	0/0:12,0:7:15.05:0,15,228	0/1:43,0:9:0.40:0,0,294	0/0:38,0:9:26.68:0,27,372	0/0:27,0:23:50.11:0,50,692	0/0:31,0:25:48.59:0,49,675	0/0:44,0:37:77.73:0,78,1180	1/1:28,2:18:45.69:271,46,0	0/0:25,0:19:45.14:0,45,655	0/0:31,0:20:45.82:0,46,637	0/0:13,0:9:25.33:0,25,384	0/0:30,0:21:52.42:0,52,791	0/0:26,0:23:59.88:0,60,856	0/0:35,0:28:62.32:0,62,960	0/0:18,0:13:40.38:0,40,626	1/1:16,8:19:5.13:304,5,0	0/0:40,0:35:95.39:0,95,1328	0/1:26,0:22:54.59:55,0,62	0/0:27,0:17:45.05:0,45,677	0/0:17,0:13:27.90:0,28,402	0/0:94,0:75:99:0,163,2372	0/0:22,0:19:33.11:0,33,503	0/0:19,0:11:28.32:0,28,398	0/0:52,0:46:99:0,111,1609	0/0:28,0:23:55.42:0,55,821	0/1:14,2:10:62.37:107,0,62	0/0:17,0:16:29.11:0,29,467	1/1:9,1:5:14.61:118,15,0
chr10	98831173	.	TG	T	1134.37	PASS	AB=0.947;AC=10;AF=0.179;AN=56;BaseQRankSum=11.100;DP=852;FS=13.833;HRun=2;HaplotypeScore=113.3441;InbreedingCoeff=0.7306;MQ=41.75;MQ0=185;MQRankSum=-6.197;QD=6.67;ReadPosRankSum=-0.471;VQSLOD=-0.4931;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,25:35:65.32:659,65,0	0/0:12,0:6:15.05:0,15,219	0/1:39,0:8:1.43:1,0,119	0/0:33,1:7:12.38:0,12,195	0/0:28,0:23:35.47:0,35,493	0/0:28,0:21:36.58:0,37,500	0/0:47,0:38:79.43:0,79,1040	1/1:31,2:18:44.46:258,44,0	0/0:22,2:18:39.10:0,39,533	0/0:32,0:20:13.11:0,13,557	0/0:13,0:9:26.12:0,26,352	0/0:34,0:22:51.92:0,52,644	0/0:26,0:23:52.03:0,52,729	0/0:33,0:26:50.29:0,50,719	0/0:20,0:14:41.14:0,41,546	1/1:15,8:18:26.75:254,27,0	0/0:40,0:34:79.48:0,79,1170	0/0:25,0:21:2.68:0,3,97	0/0:30,0:17:40.86:0,41,522	0/0:17,0:13:25.82:0,26,320	0/0:97,1:75:99:0,154,1903	0/0:23,0:20:33.11:0,33,457	0/0:21,0:10:25.63:0,26,345	0/0:51,0:45:75.50:0,75,1411	0/0:29,0:22:49.82:0,50,709	0/1:15,2:10:61.33:75,0,61	0/0:17,0:16:33.02:0,33,430	1/1:8,1:4:8.33:47,8,0
chr10	98831222	.	TG	T	835.17	PASS	AB=0.869;AC=7;AF=0.125;AN=56;BaseQRankSum=2.965;DP=871;FS=0.603;HRun=2;HaplotypeScore=102.4201;InbreedingCoeff=0.1344;MQ=39.71;MQ0=242;MQRankSum=-5.201;QD=4.54;ReadPosRankSum=-2.662;VQSLOD=-0.4570;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:38,5:28:11.97:34,0,12	0/0:11,0:8:5.63:0,6,139	0/0:11,1:2:3.01:0,3,33	0/0:15,0:5:14.99:0,15,157	0/0:28,0:20:36.23:0,36,560	0/0:35,0:26:56.47:0,56,711	0/0:47,2:36:45.43:0,45,525	0/1:36,0:17:61.74:341,0,62	0/0:28,0:17:41.41:0,41,506	0/0:35,0:22:51.46:0,51,699	0/0:18,2:14:28.67:0,29,360	0/0:28,0:17:34.70:0,35,397	0/0:26,0:18:47.52:0,48,621	0/0:29,0:23:14.05:0,14,454	0/0:27,0:19:32.61:0,33,444	0/1:17,7:13:26.16:104,0,26	0/0:43,0:33:77.62:0,78,990	0/1:28,2:21:90.45:122,0,90	0/0:29,0:13:21.80:0,22,212	0/0:20,0:12:27.31:0,27,352	0/0:100,0:73:99:0,136,1847	0/0:30,0:21:33.20:0,33,406	0/0:21,0:15:25.74:0,26,336	0/0:60,3:55:99:0,130,1753	0/0:25,0:14:19.68:0,20,537	0/1:25,14:19:99:302,0,112	0/0:13,0:12:29.46:0,29,379	1/1:11,1:8:9.28:64,9,0
chr10	98831223	.	G	GT	985.16	PASS	AB=0.855;AC=8;AF=0.143;AN=56;BaseQRankSum=1.832;DP=863;FS=1.983;HRun=1;HaplotypeScore=96.6662;InbreedingCoeff=0.3182;MQ=39.89;MQ0=239;MQRankSum=-5.085;QD=5.53;ReadPosRankSum=-1.990;VQSLOD=-0.1665;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:28:6.07:67,6,0	0/0:11,0:8:7.01:0,7,151	0/0:12,0:2:3.01:0,3,32	0/0:16,0:6:14.99:0,15,156	0/0:27,0:20:37.09:0,37,541	0/0:32,0:26:57.07:0,57,703	0/0:44,0:35:46.46:0,46,537	0/1:26,10:17:60.76:340,0,61	0/0:27,0:17:42.02:0,42,506	0/0:34,0:22:47.42:0,47,663	0/0:20,0:14:29.83:0,30,374	0/0:25,0:15:35.31:0,35,406	0/0:26,0:19:48.12:0,48,610	0/0:27,0:22:16.33:0,16,452	0/0:26,0:19:30.84:0,31,454	0/1:24,0:13:26.20:80,0,26	0/0:42,0:32:78.82:0,79,987	0/1:15,3:18:67.44:164,0,67	0/0:29,0:14:21.76:0,22,198	0/0:19,0:12:27.84:0,28,343	0/0:99,0:73:99:0,138,1805	0/0:29,0:21:33.77:0,34,391	0/0:22,0:15:29.80:0,30,352	0/0:60,1:56:99:0,112,1678	0/0:24,0:14:19.68:0,20,509	0/1:35,3:18:99:308,0,127	0/0:11,0:12:30.07:0,30,380	1/1:6,3:7:12.04:165,12,0
chr10	98835030	.	GAAA	G	1644.64	PASS	AB=0.636;AC=11;AF=0.196;AN=56;BaseQRankSum=4.861;DP=642;FS=12.359;HRun=17;HaplotypeScore=97.2604;InbreedingCoeff=0.8816;MQ=78.66;MQ0=11;MQRankSum=-1.620;QD=13.16;ReadPosRankSum=2.992;VQSLOD=0.4219;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,14:24:38.82:400,39,0	0/0:7,0:7:18.01:0,18,238	0/0:76,0:34:47.87:0,48,555	0/0:72,0:31:26.82:0,27,319	0/0:18,0:21:30.05:0,30,451	0/0:24,0:28:71.59:0,72,1030	0/0:15,0:18:45.11:0,45,657	1/1:15,9:27:35.23:314,35,0	0/0:20,0:22:55.41:0,55,855	0/0:14,0:18:39.08:0,39,556	0/0:12,0:13:30.55:0,31,454	0/0:15,0:15:30.10:0,30,489	0/0:14,0:15:36.08:0,36,507	0/0:7,0:10:24.06:0,24,310	0/0:10,0:10:21.07:0,21,315	1/1:6,9:16:23.71:232,24,0	0/0:17,0:20:45.13:0,45,717	1/1:6,17:26:50.64:483,51,0	0/0:16,0:18:48.14:0,48,751	0/0:23,0:26:45.11:0,45,679	0/0:15,0:20:48.10:0,48,698	0/0:22,0:24:51.09:0,51,736	0/0:15,0:18:33.07:0,33,492	0/0:11,0:15:39.09:0,39,563	0/0:18,0:25:54.13:0,54,802	0/1:6,7:14:28.68:167,0,29	0/0:19,0:24:28.71:0,29,598	1/1:6,11:18:19.74:227,20,0
chr10	98835691	.	C	CT	4414.79	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=7.531;DP=632;FS=11.053;HRun=0;HaplotypeScore=142.7036;InbreedingCoeff=0.9082;MQ=59.42;MQ0=8;MQRankSum=-4.589;QD=23.99;ReadPosRankSum=-2.247;VQSLOD=3.9699;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,15:23:56.91:672,57,0	0/0:8,0:8:5.41:0,5,273	0/0:26,0:13:29.92:0,30,366	0/1:41,0:15:3.25:3,0,230	0/0:23,0:22:40.12:0,40,531	0/0:20,0:19:32.13:0,32,534	0/0:22,0:22:66.09:0,66,835	1/1:7,21:25:53.28:733,53,0	0/0:26,0:25:43.40:0,43,730	0/0:21,0:21:37.03:0,37,706	0/0:10,0:10:30.06:0,30,395	0/0:26,0:25:54.72:0,55,730	0/0:24,0:22:31.11:0,31,631	0/0:14,0:13:39.05:0,39,499	0/0:28,0:26:69.07:0,69,853	1/1:5,17:21:53.78:746,54,0	0/0:19,0:18:33.36:0,33,646	1/1:3,14:16:36.01:498,36,0	0/0:24,0:23:57.09:0,57,716	0/0:19,0:19:40.79:0,41,588	0/0:34,0:34:57.58:0,58,849	0/0:19,0:18:51.16:0,51,692	0/0:21,0:21:27.06:0,27,515	0/0:24,0:23:37.69:0,38,505	0/0:24,0:23:64.76:0,65,873	1/1:8,28:34:93.01:1240,93,0	0/0:16,0:16:26.04:0,26,435	1/1:4,11:15:42.02:523,42,0
chr10	98835719	.	C	CCTCTTT	12282.63	PASS	AB=0.947;AC=29;AF=0.518;AN=56;BaseQRankSum=10.642;DP=886;FS=17.747;HRun=0;HaplotypeScore=354.0605;InbreedingCoeff=-0.7694;MQ=40.74;MQ0=34;MQRankSum=-7.199;QD=15.53;ReadPosRankSum=-5.165;VQSLOD=2.2334;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:29,9:31:43.13:1072,0,43	0/1:14,0:12:99:223,0,248	0/1:45,0:3:7.08:7,0,26	0/0:95,0:19:8.77:0,9,99	0/1:29,0:28:99:194,0,635	0/1:23,0:21:99:371,0,317	0/1:34,0:31:99:273,0,676	0/1:30,0:20:5.70:409,0,6	0/1:34,0:31:99:438,0,763	0/1:53,0:50:99:1092,0,807	0/1:12,0:12:99:191,0,297	0/1:32,0:31:99:524,0,494	0/1:25,0:25:99:264,0,580	0/1:14,0:14:49.79:50,0,335	0/1:37,0:35:99:694,0,403	0/1:17,6:20:25.44:980,0,25	0/1:28,0:24:81.97:82,0,651	0/1:16,3:17:19.53:517,0,20	0/1:27,0:21:99:166,0,378	0/1:28,0:28:99:457,0,161	0/1:40,0:33:99:103,0,564	0/1:22,0:24:99:359,0,455	0/1:30,0:32:99:283,0,623	0/1:29,0:28:57.89:58,0,476	0/1:33,0:34:99:521,0,468	1/1:23,11:31:66.21:1604,66,0	0/1:25,0:27:99:475,0,488	1/1:1,8:9:27.09:875,27,0
chr10	98835739	.	TTC	T	393.33	PASS	AB=0.852;AC=5;AF=0.089;AN=56;BaseQRankSum=-1.206;DP=795;FS=13.496;HRun=0;HaplotypeScore=369.5650;InbreedingCoeff=-0.0991;MQ=34.21;MQ0=43;MQRankSum=-3.615;QD=3.58;ReadPosRankSum=0.439;VQSLOD=1.0695;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:26:45.62:0,46,802	0/0:12,0:11:27.09:0,27,493	0/0:37,0:2:3.48:0,3,50	0/0:76,0:12:17.44:0,17,184	0/0:28,0:26:67.73:0,68,1188	0/0:26,0:21:51.17:0,51,906	0/1:32,0:28:2.92:3,0,999	0/1:22,3:11:24.86:25,0,256	0/0:33,0:29:81.26:0,81,1369	0/0:49,0:46:99:0,123,2026	0/0:13,0:11:30.09:0,30,479	0/0:34,0:32:73.02:0,73,1410	0/0:20,0:19:51.17:0,51,922	0/0:13,0:13:36.09:0,36,533	0/0:34,0:32:87.28:0,87,1520	0/1:15,4:15:99:139,0,230	0/0:26,0:22:36.80:0,37,741	0/0:15,0:10:12.28:0,12,272	0/0:30,0:23:57.19:0,57,1014	0/0:28,0:25:60.18:0,60,1147	0/0:38,0:31:31.74:0,32,603	0/0:22,0:21:49.39:0,49,1024	0/0:32,0:31:84.23:0,84,1452	0/0:25,0:23:24.27:0,24,649	0/0:28,0:28:81.23:0,81,1389	0/1:20,6:21:99:194,0,429	0/0:32,0:32:74.34:0,74,1526	0/1:5,3:8:99:143,0,120
chr10	98835903	.	TTCC	T	3183.70	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=10.916;DP=742;FS=0.436;HRun=0;HaplotypeScore=127.0556;InbreedingCoeff=0.8831;MQ=47.60;MQ0=46;MQRankSum=-2.698;QD=24.12;ReadPosRankSum=3.007;VQSLOD=3.5211;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,35:44:41.66:970,42,0	0/0:7,0:7:8.99:0,9,108	./.	0/0:23,0:4:3.01:0,3,37	0/0:23,0:23:51.14:0,51,901	0/0:23,0:22:4.09:0,4,782	0/0:39,0:35:78.23:0,78,1360	./.	0/0:22,0:22:60.19:0,60,1119	0/0:30,0:29:72.24:0,72,1369	0/0:19,0:19:42.14:0,42,825	0/0:33,0:32:72.24:0,72,1395	0/0:25,0:21:39.11:0,39,712	1/1:4,0:4:3:28,3,0	0/0:43,0:42:96.26:0,96,1742	1/1:11,10:20:39.57:629,40,0	0/0:42,0:40:99:0,111,2031	1/1:10,15:24:45.15:647,45,0	0/0:33,0:8:18.06:0,18,363	0/0:15,0:13:30.09:0,30,532	0/0:51,0:45:94.65:0,95,1731	0/0:18,0:17:45.07:0,45,807	0/0:21,0:21:48.11:0,48,838	0/0:47,0:46:84.44:0,84,1729	0/0:22,0:22:15.19:0,15,696	1/1:10,14:21:42.14:607,42,0	0/0:27,0:26:54.07:0,54,944	1/1:3,8:11:33.11:477,33,0
chr10	98836035	.	TTCC	T	1268.98	PASS	AB=0.856;AC=8;AF=0.154;AN=52;BaseQRankSum=4.496;DP=715;FS=12.232;HRun=0;HaplotypeScore=114.8651;InbreedingCoeff=0.2689;MQ=44.65;MQ0=81;MQRankSum=-5.939;QD=9.54;ReadPosRankSum=-1.009;VQSLOD=2.3794;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:37,6:35:99:549,0,244	0/0:4,0:4:11.99:0,12,212	./.	./.	0/0:22,0:19:54.12:0,54,1007	0/0:17,0:15:42.14:0,42,875	0/0:51,0:39:93.29:0,93,1730	1/1:24,0:8:3:25,3,0	0/0:39,0:34:96.15:0,96,1634	0/0:41,0:29:73.45:0,73,1379	0/0:14,0:13:36.12:0,36,748	0/0:35,0:31:84.20:0,84,1476	0/0:22,0:17:45.13:0,45,835	0/0:23,0:17:44.36:0,44,756	0/0:39,0:33:81.50:0,82,1438	0/1:14,5:17:11.88:328,0,12	0/0:37,0:32:62:0,62,1049	0/1:20,4:16:78.27:225,0,78	0/0:41,0:16:33.46:0,33,553	0/0:17,0:17:48.16:0,48,954	0/0:47,0:44:99:0,111,2067	0/0:24,0:17:42.14:0,42,789	0/0:21,0:20:45.13:0,45,821	0/0:42,0:35:87.07:0,87,1559	0/0:19,0:17:42.13:0,42,768	0/1:19,2:13:95.92:224,0,96	0/0:20,0:17:51.13:0,51,906	1/1:1,0:1:3.01:45,3,0
chr10	98836065	.	TTCTTCC	T	1946.30	PASS	AB=0.736;AC=7;AF=0.130;AN=54;BaseQRankSum=9.036;DP=735;FS=0.000;HRun=0;HaplotypeScore=148.2102;InbreedingCoeff=0.4603;MQ=49.75;MQ0=55;MQRankSum=-6.823;QD=17.86;ReadPosRankSum=-0.299;VQSLOD=3.0302;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,8:19:99:546,0,120	0/0:9,0:9:27.09:0,27,755	0/0:16,0:9:24.05:0,24,578	0/0:8,0:3:5.89:0,6,110	0/0:24,0:21:57.15:0,57,1610	0/0:22,0:19:54.11:0,54,1317	0/0:44,0:34:99:0,102,2590	1/1:14,3:4:9.02:142,9,0	0/0:34,0:29:87.28:0,87,2638	0/0:35,0:29:81.19:0,81,2227	0/0:16,0:16:48.16:0,48,1399	0/0:34,0:32:90.06:0,90,2604	0/0:22,0:18:48.15:0,48,1416	0/0:23,0:17:51.09:0,51,1430	0/0:40,0:35:99:0,105,3250	1/1:1,18:17:23.87:535,24,0	0/0:36,0:33:88.17:0,88,2540	0/1:13,13:19:91.27:313,0,91	0/0:24,0:14:39.11:0,39,1144	0/0:24,0:24:69.23:0,69,1823	0/0:55,0:52:99:0,138,3883	0/0:30,0:23:69.24:0,69,2026	0/0:32,0:30:81.22:0,81,2367	0/0:45,0:41:99:0,118,3360	0/0:26,0:25:69.24:0,69,2165	0/1:15,6:11:59.45:546,0,59	0/0:25,0:23:66.17:0,66,1732	./.
chr10	98836651	.	T	TTA	3480.78	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=-11.148;DP=241;FS=17.281;HRun=0;HaplotypeScore=27.2176;InbreedingCoeff=0.7083;MQ=74.58;MQ0=0;MQRankSum=0.079;QD=32.23;ReadPosRankSum=0.632;VQSLOD=3.5207;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,10:12:24.08:401,24,0	0/0:3,0:3:9.03:0,9,115	0/0:5,0:4:5.95:0,6,53	0/1:9,0:8:10.74:11,0,91	0/0:4,0:4:9.03:0,9,115	0/0:6,0:6:15.05:0,15,191	0/0:2,0:2:3:0,3,27	1/1:9,33:42:99:1602,99,0	0/0:5,0:5:15.04:0,15,177	0/0:8,0:8:21.07:0,21,267	0/0:6,0:6:18.06:0,18,229	0/0:4,0:4:12.04:0,12,153	0/0:4,0:4:9.03:0,9,114	0/0:2,0:2:6.02:0,6,76	0/0:8,0:8:24.07:0,24,293	1/1:1,4:5:12.04:201,12,0	0/0:30,0:30:81.25:0,81,1017	1/1:5,21:27:15.99:815,16,0	0/0:12,0:12:24.04:0,24,288	0/0:9,0:9:24.08:0,24,305	0/0:6,0:6:18.06:0,18,228	0/0:1,0:1:3.01:0,3,38	0/0:4,0:4:9.03:0,9,115	./.	0/0:6,0:6:18.05:0,18,217	1/1:0,1:1:3.01:50,3,0	0/0:8,0:8:21.07:0,21,267	1/1:3,9:12:24.08:401,24,0
chr10	98837236	.	A	AT	7024.40	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-15.411;DP=772;FS=3.219;HRun=1;HaplotypeScore=69.7419;InbreedingCoeff=0.9998;MQ=84.56;MQ0=0;MQRankSum=-2.412;QD=41.32;ReadPosRankSum=0.378;VQSLOD=5.3996;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:40:99:1708,114,0	0/0:9,0:9:27.09:0,27,350	0/0:31,0:31:93.22:0,93,1141	0/0:22,0:21:48.46:0,48,631	0/0:37,0:37:99:0,111,1366	0/0:17,0:17:51.15:0,51,647	0/0:29,0:29:87.25:0,87,1099	1/1:0,36:36:99:1539,108,0	0/0:27,0:27:81.26:0,81,1051	0/0:21,0:20:60.18:0,60,766	0/0:19,0:19:57.19:0,57,739	0/0:32,0:32:93.29:0,93,1191	0/0:33,0:33:96.30:0,96,1232	0/0:27,0:27:78.23:0,78,995	0/0:36,0:36:99:0,99,1258	1/1:0,20:20:51:764,51,0	0/0:32,0:31:87.26:0,87,1113	1/1:0,25:25:66.22:986,66,0	0/0:21,0:21:63.20:0,63,818	0/0:32,0:32:96.26:0,96,1191	0/0:35,0:35:99:0,99,1253	0/0:27,0:27:81.24:0,81,1023	0/0:26,0:26:78.25:0,78,1008	0/0:28,0:28:81.22:0,81,1032	0/0:24,0:24:72.21:0,72,897	1/1:1,26:27:42.26:1084,42,0	0/0:37,0:37:99:0,111,1426	1/1:0,22:22:63.21:944,63,0
chr10	98837769	.	GCT	G	519.90	PASS	AB=0.953;AC=15;AF=0.278;AN=54;BaseQRankSum=5.185;DP=371;FS=42.306;HRun=0;HaplotypeScore=64.7912;InbreedingCoeff=0.2997;MQ=79.62;MQ0=0;MQRankSum=-0.898;QD=3.79;ReadPosRankSum=1.631;VQSLOD=0.2942;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:7.33:74,7,0	0/0:6,0:6:2.12:0,2,66	0/0:13,0:10:8.81:0,9,220	0/0:25,0:21:13.46:0,13,338	1/1:7,0:9:18.70:147,19,0	0/0:17,0:17:10.46:0,10,179	0/0:18,0:19:10.64:0,11,170	1/1:11,0:11:23.24:197,23,0	0/1:17,1:18:11.22:11,0,174	0/1:18,0:18:4.60:5,0,292	0/0:10,0:10:25.41:0,25,212	0/1:13,1:14:19.60:20,0,186	0/0:13,0:13:9.34:0,9,166	0/1:16,1:17:10.64:11,0,170	0/0:21,0:21:26.53:0,27,275	0/1:3,0:3:11.20:21,0,11	0/0:23,1:24:5.45:0,5,223	0/0:3,0:3:0.17:0,0,0	0/0:13,0:13:26.36:0,26,252	0/0:7,0:8:7.67:0,8,165	0/0:15,0:15:25.41:0,25,227	0/1:8,1:9:5.19:5,0,103	0/0:13,0:14:18.10:0,18,153	0/0:19,0:19:27.59:0,28,239	0/0:14,0:14:25.77:0,26,259	1/1:8,1:9:17.21:137,17,0	0/1:17,1:18:57.33:57,0,223	./.
chr10	98837770	.	CT	C	748.35	PASS	AB=0.878;AC=20;AF=0.370;AN=54;BaseQRankSum=1.627;DP=372;FS=143.368;HRun=1;HaplotypeScore=58.5855;InbreedingCoeff=0.2736;MQ=82.62;MQ0=0;MQRankSum=-0.407;QD=4.07;ReadPosRankSum=-0.413;VQSLOD=-0.6053;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:19.81:128,20,0	0/0:6,0:6:10.97:0,11,92	0/0:15,0:12:21.16:0,21,219	0/0:26,0:22:20.57:0,21,305	1/1:7,1:8:20.68:171,21,0	0/1:13,4:17:18.79:19,0,130	0/1:16,3:19:50.97:51,0,80	1/1:10,0:10:24.02:218,24,0	0/1:17,2:19:27.13:27,0,206	0/0:17,1:18:18.77:0,19,331	0/0:8,2:10:1.98:0,2,158	0/1:11,3:14:62.26:62,0,137	0/0:13,0:13:15.58:0,16,165	0/1:14,3:17:6.60:7,0,188	0/0:21,1:22:15.66:0,16,272	1/1:3,0:3:3.47:28,3,0	0/1:22,3:25:49.79:50,0,155	1/1:3,0:3:5.67:28,6,0	0/1:12,1:13:14.98:15,0,216	0/0:8,0:8:11.86:0,12,145	0/0:12,3:15:10.53:0,11,208	0/0:8,0:8:11.76:0,12,102	0/0:13,1:14:20.92:0,21,147	0/0:19,0:19:8.62:0,9,189	0/0:13,1:14:11.98:0,12,212	1/1:9,0:9:15.47:116,15,0	0/1:17,1:18:7.90:8,0,235	./.
chr10	98837771	.	TC	T	1620.81	PASS	AB=0.947;AC=43;AF=0.796;AN=54;BaseQRankSum=-4.148;DP=377;FS=5.211;HRun=13;HaplotypeScore=64.2123;InbreedingCoeff=0.3779;MQ=82.08;MQ0=1;MQRankSum=-1.566;QD=4.68;ReadPosRankSum=3.337;VQSLOD=1.5641;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:3.82:0,4,17	1/1:5,0:6:4.05:12,4,0	0/1:13,0:13:11.78:12,0,64	0/1:25,0:21:12.64:13,0,111	1/1:8,0:8:6.38:23,6,0	1/1:9,5:16:20.97:127,21,0	1/1:7,8:19:31.95:196,32,0	0/0:10,0:10:0:0,0,0	1/1:12,0:19:15.58:69,16,0	1/1:14,1:19:17.04:88,17,0	0/1:9,0:9:5.19:35,0,5	1/1:10,3:14:18.85:118,19,0	1/1:9,3:13:8.87:52,9,0	1/1:10,4:17:17:89,17,0	1/1:12,5:22:30.99:181,31,0	0/0:5,0:5:7.62:0,8,39	1/1:11,11:25:20.53:206,21,0	0/0:3,0:3:5.75:0,6,29	1/1:11,1:13:13.92:92,14,0	1/1:6,1:7:4.98:28,5,0	1/1:11,3:15:5.42:28,5,0	1/1:6,1:7:4.97:25,5,0	1/1:8,6:14:6.70:46,7,0	1/1:8,7:20:31.93:194,32,0	1/1:10,2:14:10.88:71,11,0	1/1:8,0:8:1.97:6,2,0	1/1:14,0:19:13.06:50,13,0	./.
chr10	98839044	.	TG	T	2902.98	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.964;DP=626;FS=3.016;HRun=6;HaplotypeScore=72.6551;InbreedingCoeff=0.9772;MQ=79.09;MQ0=0;MQRankSum=-1.996;QD=24.19;ReadPosRankSum=-0.123;VQSLOD=3.2689;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:69.17:741,69,0	0/0:11,0:11:27.07:0,27,340	0/0:11,0:11:26.90:0,27,304	0/0:17,0:18:43.53:0,44,497	0/0:11,0:11:21.07:0,21,274	0/0:26,0:26:72.22:0,72,933	0/0:22,0:22:63.20:0,63,828	1/1:4,17:21:48.10:508,48,0	0/0:19,0:19:54.18:0,54,709	0/0:19,0:19:54.15:0,54,678	0/0:15,0:15:36.10:0,36,458	0/0:38,0:38:99:0,105,1367	0/0:31,0:31:90.29:0,90,1184	0/0:25,0:25:60.20:0,60,790	0/0:28,0:27:84.25:0,84,1076	1/1:2,26:28:63.16:677,63,0	0/0:36,0:36:93.30:0,93,1218	1/1:1,19:20:48.12:516,48,0	0/0:19,0:19:51.17:0,51,668	0/0:23,0:23:54.16:0,54,694	0/0:55,0:55:99:0,144,1874	0/0:14,0:14:42.12:0,42,538	0/0:17,0:17:45.15:0,45,589	0/0:24,0:24:63.20:0,63,829	0/0:17,0:17:48.16:0,48,627	1/1:4,19:23:54.13:580,54,0	0/0:27,0:27:66.20:0,66,852	1/1:1,2:3:6.01:64,6,0
chr10	98839711	.	G	GA	8018.77	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.758;DP=748;FS=0.000;HRun=0;HaplotypeScore=83.9215;InbreedingCoeff=0.9995;MQ=77.32;MQ0=0;MQRankSum=-2.236;QD=42.88;ReadPosRankSum=0.700;VQSLOD=5.2254;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,64:65:99:2590,163,0	0/0:13,0:13:39.13:0,39,545	0/0:22,0:22:34.05:0,34,632	0/0:12,0:12:35.84:0,36,446	0/0:21,0:21:63.21:0,63,880	0/0:18,0:18:54.15:0,54,719	0/0:22,0:22:63.21:0,63,881	1/1:1,29:29:87.30:1382,87,0	0/0:24,0:24:72.20:0,72,968	0/0:36,0:36:99:0,108,1510	0/0:18,0:18:54.17:0,54,738	0/0:29,0:29:87.29:0,87,1215	0/0:40,0:40:99:0,117,1615	0/0:25,0:25:72.24:0,72,1006	0/0:21,0:21:63.18:0,63,846	1/1:0,24:24:69.24:1103,69,0	0/0:40,0:40:99:0,117,1610	1/1:1,26:27:66.23:1055,66,0	0/0:25,0:25:69.23:0,69,965	0/0:15,0:15:42.13:0,42,570	0/0:34,0:34:99:0,99,1384	0/0:33,0:33:99:0,99,1383	0/0:22,0:22:66.22:0,66,922	0/0:33,0:33:99:0,99,1383	0/0:24,0:24:72.24:0,72,1007	1/1:1,32:33:96.31:1505,96,0	0/0:34,0:34:99:0,102,1408	1/1:0,8:8:24.08:384,24,0
chr10	98841879	.	GGTGTGGTGTGGT	G	1065.20	PASS	AB=0.630;AC=9;AF=0.161;AN=56;BaseQRankSum=2.093;DP=553;FS=15.501;HRun=0;HaplotypeScore=174.2178;InbreedingCoeff=0.7292;MQ=61.13;MQ0=26;MQRankSum=-2.247;QD=18.69;ReadPosRankSum=0.339;VQSLOD=1.6821;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:2,15:17:0:0,0,0	0/0:11,0:10:24.08:0,24,630	0/0:61,0:21:56.97:0,57,1005	0/0:71,0:32:83.65:0,84,1623	0/0:14,0:15:6.01:0,6,165	0/0:16,0:15:39.13:0,39,967	0/0:15,0:15:39.19:0,39,1172	1/1:16,0:13:24.05:402,24,0	0/0:11,0:10:27.07:0,27,840	0/0:24,0:21:57.11:0,57,1820	0/0:28,0:27:27.05:0,27,658	0/0:15,0:14:39.13:0,39,1223	0/0:11,0:11:30.10:0,30,1092	0/0:11,0:11:18.06:0,18,596	0/0:12,0:11:30.10:0,30,1167	1/1:1,8:9:12.04:364,12,0	0/0:24,0:25:72.23:0,72,2823	1/1:3,7:10:3.01:111,3,0	0/0:19,0:17:39.07:0,39,1122	0/0:20,0:21:45.11:0,45,1727	0/0:28,0:26:63.22:0,63,2229	0/0:18,0:18:12.04:0,12,295	0/0:13,0:15:12.51:0,13,403	0/0:16,0:15:42.11:0,42,1676	0/0:24,0:22:45.02:0,45,1026	0/1:5,0:17:61.84:62,0,125	0/0:12,0:11:24.04:0,24,613	1/1:0,0:5:9.03:274,9,0
chr10	98845683	.	GT	G	2186.42	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=9.853;DP=683;FS=7.517;HRun=2;HaplotypeScore=54.4302;InbreedingCoeff=0.8307;MQ=56.24;MQ0=33;MQRankSum=-12.277;QD=16.20;ReadPosRankSum=-0.739;VQSLOD=2.8041;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:20.57:216,21,0	0/0:11,0:9:27.08:0,27,385	0/1:33,0:7:61.10:61,0,97	0/0:27,0:1:3:0,3,27	0/0:21,0:21:63.21:0,63,940	0/0:26,0:24:72.20:0,72,1019	0/0:34,0:29:69.23:0,69,1016	1/1:6,7:9:21.01:252,21,0	0/0:25,0:24:72.23:0,72,1056	0/0:27,0:26:78.26:0,78,1161	0/0:16,0:16:48.15:0,48,700	0/0:33,0:30:90.30:0,90,1349	0/0:32,0:32:96.30:0,96,1397	0/0:28,0:26:78.26:0,78,1162	0/0:42,0:34:99:0,99,1463	1/1:4,20:20:39.08:486,39,0	0/0:28,0:27:81.23:0,81,1187	1/1:3,5:6:2.99:39,3,0	0/0:19,0:17:51.17:0,51,759	0/0:31,0:28:81.23:0,81,1153	0/0:38,0:37:99:0,102,1505	0/0:19,0:19:45.15:0,45,655	0/0:17,0:17:48.16:0,48,717	0/0:20,0:20:60.20:0,60,896	0/0:31,0:27:72.24:0,72,1059	1/1:0,26:26:75.24:969,75,0	0/0:23,0:22:69.21:0,69,994	1/1:1,18:19:27.09:347,27,0
chr10	98847327	.	G	GACACACACACACACAC	3889.05	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=7.890;DP=641;FS=21.908;HRun=0;HaplotypeScore=284.3542;InbreedingCoeff=0.5286;MQ=59.57;MQ0=5;MQRankSum=-4.532;QD=27.98;ReadPosRankSum=-4.919;VQSLOD=0.7632;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:46.62:117,0,47	0/0:8,0:8:24.04:0,24,674	0/0:31,0:18:26.31:0,26,343	0/0:14,0:10:6.03:0,6,282	0/0:20,0:20:39.15:0,39,1898	0/0:16,0:16:42.07:0,42,1249	0/0:25,0:25:68.91:0,69,2017	1/1:26,0:24:53.73:779,54,0	0/0:24,0:24:60.13:0,60,2145	0/0:23,0:24:69.19:0,69,2111	0/0:16,0:16:36.08:0,36,1095	0/0:46,0:46:99:0,123,3630	0/0:23,0:23:60.14:0,60,2056	0/0:25,0:25:69.11:0,69,2213	0/0:21,0:21:54.16:0,54,2012	0/1:26,0:26:99:116,0,124	0/0:31,0:31:75.41:0,75,2853	0/1:20,0:20:18.04:1340,0,18	0/0:22,0:21:48.06:0,48,931	0/0:17,0:17:48.05:0,48,1548	0/0:50,0:50:99:0,138,4320	0/0:14,0:14:32.77:0,33,969	0/0:12,0:12:36.11:0,36,1432	0/0:26,0:26:55.19:0,55,2715	0/0:15,0:15:42.09:0,42,1457	1/1:2,0:20:39.05:1310,39,0	0/0:22,0:21:60.04:0,60,1544	1/1:1,5:13:3.01:228,3,0
chr10	98847876	.	G	GT	1404.19	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=9.188;DP=397;FS=41.343;HRun=2;HaplotypeScore=71.5485;InbreedingCoeff=0.7842;MQ=71.58;MQ0=6;MQRankSum=-8.460;QD=12.00;ReadPosRankSum=-1.268;VQSLOD=-0.1870;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,2:27:71.16:430,71,0	0/0:3,0:3:3.01:0,3,32	0/1:19,0:10:13.57:14,0,90	0/0:17,0:9:6.85:0,7,87	0/0:15,0:15:39:0,39,401	0/0:16,0:16:45.07:0,45,488	0/0:17,0:17:36.07:0,36,403	1/1:11,0:11:23.93:215,24,0	0/0:17,0:17:38.36:0,38,420	0/0:12,0:12:36.05:0,36,374	0/0:13,0:13:27.45:0,27,287	0/0:13,0:13:29.18:0,29,347	0/0:12,0:12:26.13:0,26,283	0/0:10,0:10:18.04:0,18,200	0/0:11,0:11:24.04:0,24,260	1/1:23,0:22:56.20:394,56,0	0/0:19,0:18:48.12:0,48,560	1/1:8,10:18:32.26:219,32,0	0/0:18,0:18:33.11:0,33,371	0/0:9,0:9:24.03:0,24,248	0/0:16,0:15:42.01:0,42,417	0/0:12,0:12:26.01:0,26,289	0/0:8,0:8:14.12:0,14,162	0/0:11,0:11:19.69:0,20,228	0/0:15,0:15:32.59:0,33,363	1/1:15,0:15:1.87:265,2,0	0/0:15,0:15:39.07:0,39,422	1/1:3,0:3:5.88:44,6,0
chr10	98847878	.	TA	T	612.47	PASS	AB=0.800;AC=7;AF=0.125;AN=56;BaseQRankSum=8.956;DP=448;FS=18.872;HRun=14;HaplotypeScore=89.5389;InbreedingCoeff=0.6049;MQ=69.49;MQ0=6;MQRankSum=-7.028;QD=8.06;ReadPosRankSum=2.816;VQSLOD=1.0715;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,17:27:48.53:317,49,0	0/0:2,0:2:5.99:0,6,50	0/0:21,0:10:6.43:0,6,36	0/0:20,0:10:7.21:0,7,49	0/0:18,0:18:37.83:0,38,321	0/0:20,2:22:9.83:0,10,356	0/0:18,1:19:26.90:0,27,360	0/0:8,0:8:5:0,5,23	0/0:16,0:17:8.83:0,9,240	0/0:15,0:15:23.96:0,24,208	0/0:9,1:12:2.31:0,2,152	0/0:22,0:23:50.23:0,50,399	0/0:11,0:12:19.10:0,19,156	0/0:13,0:13:23.85:0,24,208	0/0:11,0:11:18.01:0,18,163	1/1:10,11:21:37.24:228,37,0	0/0:24,0:22:54.01:0,54,486	1/1:10,8:18:29.28:191,29,0	0/0:21,0:22:25.83:0,26,189	0/1:6,2:8:22.15:22,0,93	0/0:18,1:18:9.42:0,9,219	0/0:10,1:12:29.23:0,29,240	0/0:7,0:8:14.85:0,15,125	0/0:15,0:16:33.86:0,34,263	0/0:14,2:17:9.42:0,9,246	0/0:17,0:17:12.69:0,13,95	0/0:21,0:21:41.82:0,42,351	0/0:3,0:3:3.22:0,3,13
chr10	98847885	.	AAAAAAAACAACAAC	A	1023.37	PASS	AB=0.763;AC=6;AF=0.107;AN=56;BaseQRankSum=4.674;DP=458;FS=3.854;HRun=0;HaplotypeScore=196.4598;InbreedingCoeff=0.4444;MQ=64.37;MQ0=7;MQRankSum=0.086;QD=15.05;ReadPosRankSum=-3.453;VQSLOD=1.9606;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:13.39:13,0,639	0/0:3,0:3:9.03:0,9,433	0/0:23,0:9:9.50:0,10,204	0/0:24,0:12:20.36:0,20,502	0/0:19,0:19:47.72:0,48,2510	0/0:21,0:21:60.05:0,60,3077	0/0:20,0:20:57:0,57,2393	1/1:5,0:4:11.95:149,12,0	0/0:17,0:17:45.11:0,45,1723	0/0:14,0:14:29.57:0,30,1208	0/0:11,0:11:33.11:0,33,1395	0/0:23,0:23:62.75:0,63,3039	0/0:10,0:10:16.51:0,17,818	0/0:11,0:11:33.11:0,33,1465	0/0:10,0:10:23.89:0,24,1183	0/0:20,0:19:18.89:0,19,342	0/0:25,0:23:66.20:0,66,3315	0/0:17,0:17:1.24:0,1,337	0/0:21,0:21:31.53:0,32,2106	0/0:9,0:9:12.28:0,12,791	0/0:12,0:12:36.12:0,36,2014	0/0:13,0:13:32.95:0,33,1538	0/0:8,0:8:17.95:0,18,843	0/0:17,0:17:22.93:0,23,2250	0/0:19,0:19:53.96:0,54,2373	0/1:6,23:29:99:956,0,101	0/0:23,0:23:47.31:0,47,2584	1/1:3,0:3:3:25,3,0
chr10	98847892	.	ACAACAAC	A	3145.58	PASS	AB=0.981;AC=12;AF=0.214;AN=56;BaseQRankSum=11.592;DP=452;FS=18.130;HRun=0;HaplotypeScore=127.6335;InbreedingCoeff=0.7348;MQ=57.67;MQ0=7;MQRankSum=-7.279;QD=24.20;ReadPosRankSum=-2.722;VQSLOD=1.7826;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:70.87:929,71,0	0/0:3,0:3:9.01:0,9,190	0/0:18,0:5:8.25:0,8,92	0/1:22,0:10:23.96:24,0,184	0/0:19,0:18:50.85:0,51,1369	0/0:21,0:21:63.22:0,63,1877	0/0:22,0:22:62.81:0,63,1398	1/1:1,14:14:33.85:411,34,0	0/0:17,0:17:7.56:0,8,892	0/0:13,0:13:32.79:0,33,839	0/0:12,0:12:36.02:0,36,712	0/0:25,0:25:70.34:0,70,1691	0/0:8,0:8:23.98:0,24,527	0/0:12,0:12:29.76:0,30,795	0/0:8,0:8:24.08:0,24,661	1/1:15,0:14:41.94:505,42,0	0/0:25,0:23:66.20:0,66,1926	1/1:17,0:16:38.62:379,39,0	0/0:18,0:18:34.94:0,35,1174	0/0:9,0:9:15.38:0,15,534	0/0:14,0:14:33.84:0,34,1190	0/0:14,0:14:35.95:0,36,859	0/0:7,0:7:17.27:0,17,398	0/0:16,0:16:22.59:0,23,1151	0/0:20,0:20:50.62:0,51,1403	0/1:24,1:25:20.21:925,0,20	0/0:20,0:21:57.03:0,57,1461	1/1:5,0:5:9.02:150,9,0
chr10	98847895	.	AC	A	2248.04	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=13.715;DP=447;FS=8.013;HRun=1;HaplotypeScore=81.9957;InbreedingCoeff=0.7408;MQ=57.54;MQ0=7;MQRankSum=-9.986;QD=14.89;ReadPosRankSum=-0.136;VQSLOD=2.6835;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:31:86.27:1028,86,0	0/0:3,0:3:7.21:0,7,62	0/0:16,0:5:0.97:0,1,7	0/1:22,0:10:2.90:3,0,110	0/0:19,1:19:19.47:0,19,619	0/0:21,0:21:63.21:0,63,969	0/0:20,0:20:44.23:0,44,723	1/1:15,0:14:17.11:83,17,0	0/1:17,0:17:9.10:9,0,370	0/0:11,0:11:31.87:0,32,409	0/0:12,0:12:13.04:0,13,386	0/0:23,1:24:63.04:0,63,749	0/0:9,0:9:22.20:0,22,314	0/0:12,0:12:27.02:0,27,368	0/0:8,0:8:23.11:0,23,268	1/1:2,13:15:44.80:509,45,0	0/0:24,0:22:62.13:0,62,889	1/1:5,12:16:44.62:554,45,0	0/0:16,0:16:42.06:0,42,547	0/0:8,0:8:24.03:0,24,318	0/0:14,0:14:42.12:0,42,630	0/0:13,0:13:27.87:0,28,417	0/0:8,0:8:2.22:0,2,122	0/0:16,0:16:32.71:0,33,562	0/0:20,0:20:56.67:0,57,707	1/1:25,0:25:10.61:188,11,0	0/0:20,0:20:40.22:0,40,649	1/1:7,0:7:8.48:54,8,0
chr10	98847898	.	AC	A	1624.52	PASS	AB=0.962;AC=19;AF=0.339;AN=56;BaseQRankSum=12.974;DP=452;FS=17.367;HRun=1;HaplotypeScore=83.5997;InbreedingCoeff=0.4712;MQ=56.77;MQ0=7;MQRankSum=-7.746;QD=7.59;ReadPosRankSum=-1.003;VQSLOD=-0.6452;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,1:33:82.94:703,83,0	0/1:3,0:3:1.49:1,0,31	0/1:17,0:5:7.52:9,0,8	0/1:19,3:10:27.76:60,0,28	0/0:19,0:18:30.13:0,30,382	0/0:23,0:23:39.70:0,40,527	0/0:21,0:21:18.15:0,18,329	1/1:15,0:14:15.09:71,15,0	0/1:16,1:17:35.20:35,0,148	0/0:12,0:12:30.28:0,30,258	0/0:13,0:13:3.14:0,3,167	0/1:25,0:25:15.77:16,0,346	0/1:9,1:10:0.06:0,0,161	0/0:12,0:12:12.58:0,13,193	0/0:7,0:7:13.88:0,14,158	1/1:15,1:15:40.73:352,41,0	0/0:23,0:21:48.38:0,48,508	1/1:17,0:16:35.96:238,36,0	0/0:16,0:16:37.44:0,37,307	0/0:6,0:6:13.96:0,14,129	0/0:17,0:17:38.80:0,39,321	0/0:14,0:14:29.25:0,29,269	0/1:7,0:7:18.64:19,0,90	0/0:16,0:16:14.42:0,14,306	0/0:19,0:19:42.28:0,42,404	1/1:25,0:25:39.55:250,40,0	0/0:19,1:20:8.85:0,9,335	1/1:6,0:6:9.57:57,10,0
chr10	98847899	.	CAAA	C	948.41	PASS	AB=0.810;AC=5;AF=0.089;AN=56;BaseQRankSum=9.735;DP=450;FS=3.840;HRun=14;HaplotypeScore=102.1290;InbreedingCoeff=0.7426;MQ=59.15;MQ0=7;MQRankSum=-9.134;QD=14.16;ReadPosRankSum=6.233;VQSLOD=2.1183;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,15:33:54.25:594,54,0	0/0:2,0:3:9.01:0,9,127	0/0:17,0:6:12.58:0,13,104	0/0:21,0:11:14.72:0,15,131	0/0:18,0:18:50.92:0,51,681	0/0:21,0:23:54.08:0,54,710	0/0:18,0:21:51.01:0,51,631	0/0:15,0:14:17.25:0,17,106	0/0:16,0:16:32.93:0,33,355	0/0:10,0:11:21.03:0,21,301	0/0:12,0:13:26.93:0,27,312	0/0:26,0:26:68.90:0,69,977	0/0:9,0:10:23.98:0,24,270	0/0:11,0:11:24.07:0,24,374	0/0:7,0:7:18.05:0,18,285	1/1:8,8:15:36.98:325,37,0	0/0:22,0:20:51.13:0,51,773	0/1:13,4:16:10.65:159,0,11	0/0:14,0:15:42.09:0,42,590	0/0:6,0:6:15.03:0,15,188	0/0:17,0:18:51.08:0,51,660	0/0:14,0:14:33.06:0,33,397	0/0:7,0:7:18.04:0,18,243	0/0:15,0:16:38.92:0,39,553	0/0:19,0:19:39.11:0,39,573	0/0:25,0:25:33.57:0,34,332	0/0:19,0:19:48.14:0,48,741	0/0:6,0:6:13.50:0,13,95
chr10	98847902	.	A	AAC	1004.75	PASS	AB=0.924;AC=5;AF=0.089;AN=56;BaseQRankSum=8.764;DP=456;FS=1.204;HRun=0;HaplotypeScore=97.3253;InbreedingCoeff=0.4584;MQ=62.56;MQ0=7;MQRankSum=-8.882;QD=11.68;ReadPosRankSum=6.321;VQSLOD=3.2968;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,12:35:22.59:644,23,0	0/0:5,0:5:12.02:0,12,129	0/1:19,0:7:4.92:5,0,83	0/0:25,0:13:19.22:0,19,233	0/0:19,0:18:50.56:0,51,537	0/0:22,0:22:64.51:0,65,684	0/0:21,0:21:58.29:0,58,541	0/0:14,0:13:15.76:0,16,78	0/0:16,0:16:38.32:0,38,317	0/0:10,0:10:30.03:0,30,342	0/0:12,0:12:31.57:0,32,289	0/0:27,0:27:71.46:0,71,780	0/0:9,0:9:26.93:0,27,265	0/0:11,0:11:32.78:0,33,351	0/0:8,0:8:21.02:0,21,222	0/1:13,2:14:2.67:263,0,3	0/0:21,0:20:52.31:0,52,599	0/1:14,2:15:19.41:211,0,19	0/0:17,0:17:45.03:0,45,510	0/0:8,0:8:20.98:0,21,199	0/0:19,0:19:53.20:0,53,569	0/0:14,0:14:38.99:0,39,443	0/0:7,0:7:20.80:0,21,205	0/0:16,0:16:44.84:0,45,548	0/0:20,0:20:50.81:0,51,527	0/0:25,0:25:29.06:0,29,200	0/0:19,0:19:35.46:0,35,504	0/0:5,0:5:10.49:0,10,70
chr10	98848245	.	TC	T	364.27	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.043;DP=634;FS=0.000;HRun=7;HaplotypeScore=66.5865;InbreedingCoeff=0.9946;MQ=81.70;MQ0=0;MQRankSum=-2.452;QD=15.84;ReadPosRankSum=0.555;VQSLOD=3.4069;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:63.18:0,63,774	0/0:9,0:9:27.09:0,27,339	0/0:28,0:24:34.29:0,34,448	0/0:31,0:30:43.37:0,43,720	0/0:17,0:17:48.14:0,48,590	0/0:25,0:25:66.21:0,66,830	0/0:25,0:25:72.22:0,72,892	0/0:24,0:24:57.15:0,57,700	0/0:23,0:23:63.18:0,63,777	0/0:11,0:11:30.10:0,30,377	0/0:15,0:15:38.35:0,38,488	0/0:30,0:30:81.25:0,81,1002	0/0:22,0:22:60.19:0,60,755	0/0:26,0:26:72.23:0,72,905	0/0:21,0:21:57.16:0,57,693	1/1:4,19:23:45.10:459,45,0	0/0:21,0:21:54.15:0,54,655	0/0:34,0:34:99:0,99,1229	0/0:17,0:17:45.14:0,45,565	0/0:13,0:13:33.10:0,33,402	0/0:56,0:56:99:0,156,1954	0/0:20,0:20:54.17:0,54,679	0/0:10,0:10:27.09:0,27,339	0/0:33,0:33:87.28:0,87,1094	0/0:20,0:20:51.11:0,51,610	0/0:13,0:13:33.11:0,33,415	0/0:27,0:27:72.22:0,72,892	0/0:10,0:10:24.08:0,24,302
chr10	98849956	.	CCCGAAAGAAG	C	3529.07	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.149;DP=609;FS=2.236;HRun=0;HaplotypeScore=178.7099;InbreedingCoeff=0.9950;MQ=79.20;MQ0=0;MQRankSum=-9.337;QD=72.02;ReadPosRankSum=1.028;VQSLOD=3.8288;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,35:36:75.26:2587,75,0	0/0:13,0:13:39.09:0,39,1842	0/0:19,0:19:49.86:0,50,2461	0/0:22,0:22:66.20:0,66,2752	0/0:23,0:23:69.24:0,69,3382	0/0:21,0:21:63.22:0,63,3359	0/0:26,0:26:78.27:0,78,4092	0/0:27,0:27:75.26:0,75,3587	0/0:21,0:21:63.22:0,63,3164	0/0:18,0:18:54.17:0,54,2664	0/0:11,0:11:33.10:0,33,1507	0/0:31,0:31:90.30:0,90,4522	0/0:26,0:26:78.27:0,78,4121	0/0:20,0:20:60.21:0,60,3089	0/0:31,0:31:93.32:0,93,4944	0/0:21,0:21:63.20:0,63,3300	0/0:30,0:30:90.31:0,90,4702	1/1:0,13:13:27.09:942,27,0	0/0:19,0:19:54.19:0,54,2552	0/0:14,0:14:33.11:0,33,1811	0/0:25,0:25:75.26:0,75,3918	0/0:16,0:16:48.16:0,48,2542	0/0:22,0:22:66.23:0,66,3472	0/0:29,0:29:87.29:0,87,4540	0/0:13,0:13:39.13:0,39,2003	0/0:25,0:25:75.26:0,75,3799	0/0:31,0:31:93.32:0,93,5045	0/0:6,0:6:18.06:0,18,989
chr10	98851046	.	A	AAAT	2096.87	PASS	AB=0.600;AC=11;AF=0.212;AN=52;BaseQRankSum=-5.202;DP=365;FS=0.555;HRun=0;HaplotypeScore=51.7687;InbreedingCoeff=0.8020;MQ=57.03;MQ0=3;MQRankSum=-2.789;QD=20.56;ReadPosRankSum=-2.395;VQSLOD=2.3820;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:14.66:113,15,0	0/0:4,0:4:9.01:0,9,108	./.	./.	0/0:15,0:15:36.02:0,36,411	0/0:22,0:22:54.05:0,54,599	0/0:10,0:10:21.01:0,21,210	1/1:38,0:38:18.20:555,18,0	0/0:10,0:10:12.02:0,12,150	0/0:14,0:14:39.09:0,39,473	0/0:10,0:10:21.01:0,21,223	0/0:13,0:14:32.98:0,33,322	0/0:11,0:11:27.04:0,27,323	0/0:7,0:7:9.03:0,9,126	0/0:12,0:12:33.09:0,33,444	0/1:3,6:9:2.53:222,0,3	0/0:30,0:30:81.04:0,81,943	1/1:9,0:9:2.94:18,3,0	0/0:21,0:20:39.04:0,39,416	0/0:6,0:6:15.03:0,15,177	0/0:9,0:9:21.07:0,21,294	0/0:3,0:3:6.02:0,6,84	0/0:3,0:3:8.98:0,9,86	0/0:5,0:5:8.98:0,9,103	0/0:36,0:36:74.68:0,75,942	1/1:1,7:11:26.98:356,27,0	0/0:13,0:13:20.77:0,21,222	1/1:3,21:24:30.25:997,30,0
chr10	98851067	.	T	TAATAATAATAATAATAATAAC	901.64	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=2.189;DP=433;FS=5.490;HRun=0;HaplotypeScore=220.5012;InbreedingCoeff=0.6355;MQ=59.47;MQ0=3;MQRankSum=-2.147;QD=27.32;ReadPosRankSum=-0.602;VQSLOD=2.3166;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:29.97:705,30,0	0/0:3,0:3:9.03:0,9,370	0/0:7,0:4:7.44:0,7,40	0/1:5,0:2:10.56:11,0,21	0/0:17,0:17:44.71:0,45,1543	0/0:22,0:22:63.13:0,63,2147	0/0:17,0:17:46.28:0,46,906	0/0:38,0:38:17.10:0,17,1019	0/0:9,0:9:27.02:0,27,522	0/0:17,0:17:51.14:0,51,1670	0/0:10,0:10:29.29:0,29,974	0/0:19,0:19:57.04:0,57,1148	0/0:14,0:14:39.06:0,39,1282	0/0:10,0:10:21.01:0,21,529	0/0:18,0:18:54.09:0,54,1777	0/0:10,0:10:23.93:0,24,356	0/0:35,0:35:99:0,102,4138	1/1:0,12:17:3.01:301,3,0	0/0:24,0:23:62.68:0,63,1375	0/0:10,0:10:30.03:0,30,749	0/0:11,0:11:29.43:0,29,1176	0/0:7,0:7:18.01:0,18,452	0/0:5,0:5:15.02:0,15,453	0/0:8,0:8:21:0,21,485	0/0:37,0:37:99:0,102,3706	0/0:14,0:14:11.92:0,12,532	0/0:10,0:10:29.96:0,30,998	0/0:28,0:28:71.81:0,72,1574
chr10	98853390	.	TTTTG	T	759.41	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.346;DP=427;FS=7.480;HRun=0;HaplotypeScore=72.3941;InbreedingCoeff=0.8612;MQ=68.31;MQ0=1;MQRankSum=-1.539;QD=42.19;ReadPosRankSum=0.395;VQSLOD=3.6059;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:36.12:0,36,860	0/0:4,0:4:12.04:0,12,284	0/0:17,0:15:16.03:0,16,361	0/0:17,0:16:10.03:0,10,499	0/0:6,0:5:15.05:0,15,372	0/0:9,0:9:21.07:0,21,521	0/0:18,0:18:42.11:0,42,899	0/0:24,0:24:42.14:0,42,945	0/0:9,0:9:27.07:0,27,618	0/0:17,0:17:39.12:0,39,913	0/0:8,0:8:18.06:0,18,447	0/0:17,0:17:39.13:0,39,968	0/0:14,0:14:30.10:0,30,704	0/0:15,0:15:27.09:0,27,616	0/0:7,0:7:15.03:0,15,281	1/1:2,16:18:54.17:854,54,0	0/0:25,0:25:60.21:0,60,1418	0/0:37,0:37:49.58:0,50,1501	0/0:20,0:20:42.13:0,42,926	0/0:10,0:10:21.07:0,21,488	0/0:6,0:6:15.05:0,15,333	0/0:11,0:11:24.08:0,24,566	0/0:13,0:13:36.12:0,36,872	0/0:21,0:21:57.18:0,57,1263	0/0:21,0:21:51.16:0,51,1173	0/0:11,0:11:30.09:0,30,664	0/0:21,0:21:60.18:0,60,1358	0/0:10,0:10:30.10:0,30,740
chr10	98853434	.	CT	C	1175.14	PASS	AB=0.886;AC=11;AF=0.196;AN=56;BaseQRankSum=5.907;DP=466;FS=1.604;HRun=12;HaplotypeScore=55.9464;InbreedingCoeff=0.4796;MQ=69.05;MQ0=2;MQRankSum=-2.766;QD=8.45;ReadPosRankSum=3.179;VQSLOD=2.4183;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:27:56.77:441,57,0	0/1:6,1:7:2.20:2,0,162	0/1:17,2:15:9.83:10,0,127	0/0:16,0:11:11.97:0,12,104	0/0:11,1:12:0.82:0,1,190	0/0:16,0:16:36.07:0,36,365	0/0:16,0:16:42.03:0,42,409	0/0:24,0:24:48.09:0,48,481	0/0:12,1:13:9.84:0,10,276	0/0:17,0:18:38.90:0,39,375	0/0:8,0:8:15.02:0,15,148	0/0:13,0:14:29.20:0,29,322	0/0:12,1:13:9.83:0,10,281	0/0:10,0:10:27:0,27,256	0/1:7,2:9:2.20:2,0,162	1/1:6,14:20:17.36:316,17,0	0/0:30,0:30:78.14:0,78,784	1/1:3,32:35:47.23:546,47,0	0/0:23,0:26:50.74:0,51,471	0/1:10,1:12:1.48:1,0,146	0/0:5,0:5:6.01:0,6,61	0/1:8,1:10:2.41:2,0,130	0/0:17,0:18:41.92:0,42,409	0/0:19,1:22:36.73:0,37,539	0/0:18,0:18:48.01:0,48,474	0/0:16,0:16:22.66:0,23,203	0/0:22,1:23:36.88:0,37,544	0/0:8,0:9:11.85:0,12,99
chr10	98854154	.	AG	A	1125.92	PASS	AB=0.902;AC=11;AF=0.196;AN=56;BaseQRankSum=2.556;DP=503;FS=12.202;HRun=11;HaplotypeScore=70.7192;InbreedingCoeff=0.3386;MQ=72.05;MQ0=1;MQRankSum=0.494;QD=7.26;ReadPosRankSum=3.388;VQSLOD=0.8380;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,23:37:61.99:515,62,0	0/0:5,0:7:5.74:0,6,30	0/1:16,0:14:11.94:12,0,79	0/1:13,0:13:19.70:20,0,67	0/0:17,0:17:24.01:0,24,231	0/0:11,0:11:17.27:0,17,218	0/0:27,4:31:1.19:0,1,608	0/0:26,0:26:21.82:0,22,118	0/0:19,1:20:17.40:0,17,366	0/0:15,0:15:15.03:0,15,153	0/0:6,0:7:2.94:0,3,18	0/0:18,0:18:33.02:0,33,326	0/0:23,1:24:20.40:0,20,381	0/0:16,2:19:11.41:0,11,306	0/1:15,3:18:37.85:38,0,244	1/1:3,12:15:32.96:271,33,0	0/0:30,2:32:25.85:0,26,657	1/1:6,21:28:49.96:400,50,0	0/0:9,0:9:15.02:0,15,151	0/1:13,4:17:19.24:19,0,210	0/0:24,0:23:30.06:0,30,313	0/0:9,0:9:21.05:0,21,224	0/1:9,1:10:12.61:13,0,84	0/0:26,0:26:38.86:0,39,583	0/0:14,1:15:5.03:0,5,226	0/0:11,0:11:26.26:0,26,114	0/0:18,1:19:11.06:0,11,297	0/0:5,0:8:13.92:0,14,65
chr10	98854156	.	G	GGA	1611.42	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-6.937;DP=511;FS=15.186;HRun=0;HaplotypeScore=95.6461;InbreedingCoeff=0.7987;MQ=70.99;MQ0=1;MQRankSum=3.186;QD=24.42;ReadPosRankSum=-1.365;VQSLOD=3.3636;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:94.77:0,95,809	0/0:8,0:8:8.64:0,9,55	0/0:14,0:12:28.14:0,28,249	0/0:14,0:13:18.91:0,19,132	0/0:16,0:16:36.04:0,36,427	0/0:10,0:10:30.07:0,30,398	0/0:33,0:33:90.18:0,90,1154	1/1:11,19:32:65.50:820,66,0	0/0:19,0:19:54.07:0,54,678	0/0:13,0:13:27.06:0,27,320	0/0:5,0:5:9.01:0,9,95	0/0:20,0:20:45.03:0,45,540	0/0:22,0:22:63.05:0,63,712	0/0:20,0:20:42.04:0,42,536	0/0:16,0:16:45.08:0,45,566	0/0:16,0:16:35.96:0,36,311	0/0:32,0:32:84.19:0,84,1123	0/0:27,0:27:65.94:0,66,568	0/0:10,0:10:1.70:0,2,234	0/0:19,0:19:39.04:0,39,451	0/0:23,0:22:48.06:0,48,584	0/0:10,0:10:23.97:0,24,336	0/1:10,0:10:1.96:2,0,193	0/0:24,0:24:71.65:0,72,937	0/0:13,0:13:36.06:0,36,438	1/1:2,12:15:42.10:630,42,0	0/0:21,0:21:51.93:0,52,575	1/1:6,3:9:24.01:301,24,0
chr10	98854765	.	AC	A	421.34	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=3.459;DP=352;FS=21.312;HRun=7;HaplotypeScore=44.2475;InbreedingCoeff=0.7318;MQ=78.01;MQ0=0;MQRankSum=-1.744;QD=17.56;ReadPosRankSum=3.055;VQSLOD=2.0698;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:30.10:0,30,385	./.	0/0:17,0:15:19.27:0,19,303	0/0:20,0:16:22.74:0,23,245	0/0:5,0:5:9.03:0,9,118	0/0:13,0:13:36.08:0,36,440	0/0:36,0:36:93.27:0,93,1186	0/0:10,0:10:14.98:0,15,174	0/0:10,0:10:21.04:0,21,248	0/0:7,0:7:9.03:0,9,118	0/0:4,0:4:9.03:0,9,115	0/0:7,0:7:18.06:0,18,235	0/0:13,0:13:27.06:0,27,319	0/0:5,0:5:12.04:0,12,155	0/0:9,0:9:24.08:0,24,315	1/1:3,21:24:47.99:516,48,0	0/0:31,0:31:81.25:0,81,1033	0/0:24,0:24:62.65:0,63,747	0/0:10,0:10:30.08:0,30,373	0/0:7,0:7:15.05:0,15,197	0/0:24,0:24:59.98:0,60,751	0/0:5,0:5:12.04:0,12,158	0/0:5,0:5:12.04:0,12,157	0/0:17,0:17:25.40:0,25,519	0/0:5,0:5:15.05:0,15,196	0/0:15,0:15:33.09:0,33,412	0/0:10,0:9:18.01:0,18,187	0/0:6,0:6:18.06:0,18,237
chr10	98855082	.	TCA	T	180.96	PASS	AB=0.921;AC=3;AF=0.054;AN=56;BaseQRankSum=7.347;DP=382;FS=10.396;HRun=0;HaplotypeScore=53.8755;InbreedingCoeff=0.4754;MQ=76.62;MQ0=0;MQRankSum=-1.791;QD=3.48;ReadPosRankSum=5.303;VQSLOD=-0.1020;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,3:35:89.58:90,0,232	0/0:3,0:3:9.01:0,9,93	0/0:12,0:10:18.31:0,18,189	0/0:12,0:12:26.91:0,27,243	0/0:12,0:12:29.59:0,30,335	0/0:11,0:11:20.15:0,20,167	0/0:19,0:19:53.49:0,53,648	0/0:22,0:21:51.25:0,51,475	0/0:22,0:22:51.04:0,51,712	0/0:7,0:7:11.90:0,12,147	0/0:5,0:5:5.93:0,6,69	0/0:15,0:15:41.79:0,42,441	0/0:17,0:17:47.76:0,48,528	0/0:12,0:12:29.96:0,30,320	0/0:21,0:21:47.89:0,48,562	0/0:18,0:18:7.82:0,8,220	0/0:29,0:29:76.06:0,76,1031	1/1:14,3:17:17.65:194,18,0	0/0:9,0:9:13.12:0,13,152	0/0:7,0:7:17.99:0,18,177	0/0:17,0:17:34.93:0,35,370	0/0:5,0:5:8.99:0,9,74	0/0:7,0:7:18:0,18,174	0/0:15,0:15:41.93:0,42,523	0/0:7,0:7:20.87:0,21,204	0/0:14,0:14:35.78:0,36,325	0/0:9,0:9:26.90:0,27,326	0/0:3,0:3:8.87:0,9,59
chr10	98855338	.	CT	C	975.42	PASS	AB=0.875;AC=11;AF=0.196;AN=56;BaseQRankSum=8.013;DP=565;FS=2.134;HRun=13;HaplotypeScore=68.7654;InbreedingCoeff=0.4613;MQ=74.29;MQ0=0;MQRankSum=-0.625;QD=5.39;ReadPosRankSum=3.034;VQSLOD=2.2348;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,17:24:46.75:334,47,0	0/0:6,0:7:11.17:0,11,134	0/0:22,1:16:23.99:0,24,208	0/0:16,0:13:14.05:0,14,88	0/0:19,1:22:27.12:0,27,340	0/0:22,0:25:50.59:0,51,451	0/1:12,2:14:12.52:13,0,205	0/1:29,4:35:23.98:24,0,397	0/0:14,0:14:35.94:0,36,317	0/0:21,2:23:4.24:0,4,358	0/0:15,0:16:35.89:0,36,331	0/0:20,2:23:31.97:0,32,440	0/0:16,0:16:12.72:0,13,229	0/0:16,0:17:26.87:0,27,241	0/0:18,0:18:21.93:0,22,350	1/1:4,11:16:28.86:203,29,0	0/0:31,1:32:20.10:0,20,635	1/1:8,26:35:73.53:528,74,0	0/0:13,1:16:16.82:0,17,294	0/0:24,0:27:54.54:0,55,469	0/1:19,6:25:27.55:28,0,402	0/0:16,2:19:14.13:0,14,289	0/0:15,0:18:29.87:0,30,271	0/0:10,0:13:22.78:0,23,227	0/0:21,0:21:49.30:0,49,457	0/1:21,2:23:1.85:2,0,291	0/0:15,1:18:16.14:0,16,332	0/1:8,1:9:0.88:1,0,154
chr10	98855711	.	CA	C	2183.93	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.085;DP=672;FS=0.492;HRun=3;HaplotypeScore=66.1585;InbreedingCoeff=0.9994;MQ=86.31;MQ0=0;MQRankSum=-4.437;QD=29.51;ReadPosRankSum=3.159;VQSLOD=3.1376;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,40:42:99:1376,111,0	0/0:13,0:13:36.12:0,36,518	0/0:22,0:22:59.23:0,59,801	0/0:24,0:24:64.06:0,64,884	0/0:26,0:26:78.25:0,78,1094	0/0:23,0:23:63.21:0,63,906	0/0:28,0:28:81.24:0,81,1128	0/0:22,0:22:66.13:0,66,857	0/0:21,0:21:63.20:0,63,890	0/0:24,0:24:72.23:0,72,1002	0/0:16,0:16:39.13:0,39,562	0/0:32,0:32:93.31:0,93,1339	0/0:20,0:20:57.19:0,57,817	0/0:22,0:22:60.20:0,60,864	0/0:33,0:33:99:0,99,1410	0/0:23,0:23:69.22:0,69,976	0/0:22,0:22:66.22:0,66,950	1/1:1,31:32:75.24:930,75,0	0/0:26,0:26:72.22:0,72,993	0/0:32,0:32:90.29:0,90,1278	0/0:28,0:28:84.25:0,84,1171	0/0:16,0:16:45.15:0,45,648	0/0:23,0:23:69.16:0,69,930	0/0:33,0:33:96.28:0,96,1359	0/0:16,0:16:48.16:0,48,691	0/0:17,0:17:51.16:0,51,718	0/0:26,0:26:75.25:0,75,1074	0/0:10,0:10:27.09:0,27,389
chr10	98855963	.	G	GA	234.16	PASS	AB=0.600;AC=11;AF=0.196;AN=56;BaseQRankSum=1.338;DP=298;FS=20.928;HRun=0;HaplotypeScore=42.8956;InbreedingCoeff=0.6907;MQ=71.27;MQ0=3;MQRankSum=-0.098;QD=4.98;ReadPosRankSum=-1.686;VQSLOD=1.3291;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,4:5:3.01:37,3,0	0/0:6,0:6:11.35:0,11,93	0/0:22,0:12:27.38:0,27,246	0/0:16,0:13:9.19:0,9,192	0/0:6,0:6:15:0,15,136	0/0:10,0:10:26.85:0,27,212	0/0:16,0:16:36.38:0,36,292	1/1:14,0:14:20.93:171,21,0	0/0:12,0:12:23:0,23,191	0/0:13,0:13:29.94:0,30,256	0/0:9,0:9:15.32:0,15,112	0/0:7,0:7:17.93:0,18,155	0/0:9,0:9:21.42:0,21,175	0/0:4,0:4:5.99:0,6,49	0/0:12,0:12:20.17:0,20,154	1/1:6,0:6:6.16:57,6,0	0/0:25,0:26:65.17:0,65,567	0/1:5,9:14:28.07:46,0,28	0/0:16,0:17:41.81:0,42,340	0/0:9,0:9:26.88:0,27,217	0/0:8,0:8:20.72:0,21,153	0/0:6,0:6:11.99:0,12,100	0/0:8,0:8:20.03:0,20,159	0/0:11,0:11:24:0,24,207	0/0:8,0:8:23.64:0,24,191	1/1:2,0:2:6:54,6,0	0/0:16,0:16:35.78:0,36,287	1/1:0,5:5:2.97:20,3,0
chr10	98858678	.	TAC	T	477.09	PASS	AB=0.924;AC=8;AF=0.143;AN=56;BaseQRankSum=12.398;DP=1315;FS=46.364;HRun=0;HaplotypeScore=497.1385;InbreedingCoeff=0.1252;MQ=41.53;MQ0=35;MQRankSum=-8.026;QD=1.65;ReadPosRankSum=-1.313;VQSLOD=-0.5269;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:48:58.55:0,59,1222	0/1:22,4:26:68.17:68,0,433	0/0:34,0:5:12.88:0,13,160	0/0:37,0:10:12.62:0,13,258	0/0:57,5:61:29.39:0,29,1010	0/0:30,1:31:69.11:0,69,1055	0/0:48,0:48:99:0,102,1625	1/1:23,0:15:16.01:62,16,0	0/0:58,0:58:99:0,108,1568	0/1:81,6:82:99:149,0,1866	0/0:38,4:42:17.70:0,18,811	0/0:58,0:58:99:0,108,1680	0/0:49,0:49:69.08:0,69,1593	0/0:54,0:52:99:0,106,1641	0/0:80,0:77:99:0,145,2472	0/0:60,2:62:99:0,110,1525	0/0:27,1:28:61.51:0,62,1060	0/0:15,0:14:9.71:0,10,478	0/0:22,0:12:27.09:0,27,457	0/0:57,7:64:24.61:0,25,1316	0/0:77,0:72:99:0,150,2399	0/0:58,3:61:35.22:0,35,1260	0/0:50,5:55:34.96:0,35,1206	0/0:39,0:40:72.17:0,72,1169	0/1:45,15:60:64.01:64,0,1213	0/1:44,0:42:64.09:179,0,64	0/1:32,2:33:37.90:38,0,989	0/1:15,0:14:10.79:58,0,11
chr10	98858685	.	ACACT	A	1960.33	PASS	AB=0.750;AC=5;AF=0.089;AN=56;BaseQRankSum=8.987;DP=1339;FS=48.812;HRun=0;HaplotypeScore=538.2610;InbreedingCoeff=0.8060;MQ=42.91;MQ0=20;MQRankSum=-9.566;QD=24.20;ReadPosRankSum=-2.989;VQSLOD=1.3811;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:79.60:0,80,2119	0/0:26,0:26:22.86:0,23,738	0/0:33,0:6:17.72:0,18,290	0/0:34,0:10:24.23:0,24,402	0/0:63,0:61:71.15:0,71,1637	0/0:33,0:33:66.63:0,67,1494	0/0:49,0:49:99:0,99,2400	1/1:11,7:12:30.03:451,30,0	0/0:59,0:59:99:0,108,2304	0/0:83,0:80:4.02:0,4,2882	0/0:44,0:44:54.08:0,54,1269	0/0:57,0:56:99:0,108,2499	0/0:51,0:51:95.44:0,95,2701	0/0:55,0:53:99:0,110,2612	0/0:82,0:79:99:0,157,3808	0/0:62,0:62:85.18:0,85,2158	0/0:29,0:29:62.79:0,63,1726	0/0:18,0:16:12.58:0,13,893	0/0:20,0:13:39.09:0,39,810	0/0:66,0:65:91.20:0,91,1963	0/0:83,0:78:99:0,159,3933	0/0:61,0:61:65.58:0,66,1969	0/0:57,0:57:70.77:0,71,1946	0/0:43,0:43:81.75:0,82,1864	0/0:62,0:62:7.46:0,7,1873	0/1:30,15:43:0.31:1144,0,0	0/0:37,0:36:22.84:0,23,1546	1/1:10,8:17:30.01:494,30,0
chr10	98858694	.	CATAG	C	1431.02	PASS	AB=0.933;AC=11;AF=0.196;AN=56;BaseQRankSum=10.659;DP=1352;FS=21.319;HRun=0;HaplotypeScore=541.5656;InbreedingCoeff=0.3735;MQ=44.20;MQ0=13;MQRankSum=-8.940;QD=4.16;ReadPosRankSum=-2.900;VQSLOD=-0.5901;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:56.10:0,56,1611	0/0:22,3:25:46.19:0,46,604	0/0:31,0:6:10.95:0,11,238	0/0:34,0:9:18.50:0,19,346	0/0:57,7:62:78.49:0,78,1289	0/0:34,2:36:44.74:0,45,1049	0/0:41,0:41:86.32:0,86,1475	1/1:19,0:9:20.49:220,20,0	0/0:60,0:60:71.40:0,71,1763	0/1:79,6:82:99:225,0,2058	0/0:37,4:41:56.64:0,57,940	0/0:60,0:59:99:0,100,1692	0/0:51,3:54:11.36:0,11,2180	0/0:56,0:54:99:0,108,1970	0/0:85,0:81:99:0,128,2605	0/0:60,2:62:72.79:0,73,1470	0/0:28,0:28:71.80:0,72,1302	0/1:19,0:17:11.33:11,0,619	0/0:20,0:14:41.14:0,41,660	0/1:51,9:59:30.11:30,0,1260	0/0:86,0:83:99:0,168,2914	0/0:57,7:65:72.33:0,72,1452	0/1:56,4:60:17.33:17,0,1438	0/0:44,1:45:56.45:0,56,1355	0/0:59,4:63:43.80:0,44,1386	1/1:44,0:42:2.73:620,3,0	0/1:34,3:36:99:119,0,1097	1/1:19,1:19:29.56:346,30,0
chr10	98858832	.	TAC	T	2184.02	PASS	AB=0.700;AC=5;AF=0.093;AN=54;BaseQRankSum=3.215;DP=1206;FS=1.524;HRun=0;HaplotypeScore=225.6572;InbreedingCoeff=0.7948;MQ=49.37;MQ0=75;MQRankSum=-1.358;QD=22.52;ReadPosRankSum=-1.820;VQSLOD=3.5715;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,138,2269	0/0:16,0:16:33.11:0,33,554	0/0:39,0:5:9.88:0,10,124	./.	0/0:40,0:37:56.72:0,57,961	0/0:37,0:37:84.29:0,84,1451	0/0:42,0:40:90.31:0,90,1465	1/1:20,25:34:78.16:925,78,0	0/0:65,0:64:99:0,150,2396	0/0:51,0:49:99:0,129,1948	0/0:34,0:34:63.22:0,63,1044	0/0:61,0:61:99:0,156,2509	0/0:40,0:40:99:0,105,1749	0/0:45,0:45:99:0,111,1731	0/0:79,0:78:99:0,193,3224	0/0:54,0:54:99:0,132,2140	0/0:38,0:38:99:0,105,1689	0/0:37,0:37:99:0,99,1582	0/0:17,0:9:24.08:0,24,385	0/0:38,0:36:72.66:0,73,1116	0/0:92,0:89:99:0,223,3590	0/0:39,0:39:57.32:0,57,913	0/0:31,0:31:63.20:0,63,1039	0/0:40,0:40:93.19:0,93,1539	0/0:37,0:37:25.26:0,25,877	1/1:17,28:42:78.53:1252,79,0	0/0:36,0:35:96.31:0,96,1572	0/1:4,3:7:8.22:136,0,8
chr10	98858896	.	TAC	T	4041.55	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=9.588;DP=1129;FS=5.943;HRun=0;HaplotypeScore=190.9933;InbreedingCoeff=0.9409;MQ=49.64;MQ0=93;MQRankSum=-8.404;QD=27.49;ReadPosRankSum=-2.260;VQSLOD=3.6658;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,111,1737	0/0:17,0:17:36.12:0,36,564	./.	0/0:36,0:2:2.68:0,3,11	0/0:30,0:29:60.20:0,60,996	0/0:32,0:32:72.57:0,73,1381	0/0:38,0:38:93.26:0,93,1471	1/1:19,66:70:99:2254,177,0	0/0:54,0:53:99:0,159,2591	0/0:42,0:37:99:0,102,1633	0/0:27,0:27:48.16:0,48,765	0/0:56,0:55:99:0,141,2235	0/0:43,0:43:99:0,117,1943	0/0:45,0:44:99:0,108,1816	0/0:63,0:60:99:0,150,2388	0/0:33,0:33:93.32:0,93,1578	0/0:27,0:27:69.24:0,69,1176	0/0:25,0:26:66.23:0,66,1113	0/0:23,0:10:30.09:0,30,464	0/0:46,0:46:99:0,114,1853	0/0:92,0:88:99:0,232,3825	0/0:24,0:24:50.57:0,51,820	0/0:29,0:29:69.23:0,69,1135	0/0:41,0:41:96.31:0,96,1607	0/0:36,0:36:90.10:0,90,1455	1/1:16,31:42:43.92:1304,44,0	0/0:30,0:29:75.19:0,75,1208	1/1:2,13:15:38.80:483,39,0
chr10	98859301	.	G	GA	1324.02	PASS	AB=0.859;AC=16;AF=0.286;AN=56;BaseQRankSum=-5.467;DP=648;FS=10.607;HRun=13;HaplotypeScore=85.9784;InbreedingCoeff=0.1096;MQ=72.05;MQ0=1;MQRankSum=-0.361;QD=4.28;ReadPosRankSum=-4.027;VQSLOD=-0.1932;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,20:35:26.29:336,0,26	0/0:5,0:5:11.88:0,12,80	0/0:17,0:21:30.97:0,31,187	0/0:12,0:12:14.23:0,14,89	0/0:28,0:30:42.58:0,43,291	0/0:16,0:17:28.69:0,29,191	0/1:17,2:22:7.01:7,0,230	1/1:20,9:29:6.63:310,7,0	0/0:19,0:21:19.52:0,20,235	0/1:15,1:17:2.07:2,0,124	0/1:17,3:20:18.83:19,0,172	0/0:17,0:17:32.58:0,33,226	0/0:18,1:19:4.82:0,5,176	0/0:23,0:27:6.27:0,6,154	0/0:27,0:29:56.59:0,57,366	0/0:27,2:32:12.86:0,13,352	0/1:10,3:17:69.92:79,0,70	0/1:7,15:22:9.63:162,0,10	0/1:29,1:32:54.33:54,0,168	0/0:27,0:28:39.55:0,40,268	0/1:16,1:20:10.43:10,0,180	0/1:23,2:27:13.24:13,0,176	0/0:24,0:27:19.80:0,20,255	0/1:27,2:31:12.45:12,0,315	0/0:18,1:21:13.10:0,13,227	1/1:9,15:27:10.63:289,11,0	0/0:26,2:29:30.60:0,31,347	1/1:3,7:10:21.02:195,21,0
chr10	98859709	.	CA	C	3523.96	PASS	AB=0.538;AC=9;AF=0.161;AN=56;BaseQRankSum=11.823;DP=667;FS=5.285;HRun=1;HaplotypeScore=69.4518;InbreedingCoeff=0.8396;MQ=63.85;MQ0=1;MQRankSum=0.279;QD=38.72;ReadPosRankSum=-1.218;VQSLOD=3.7544;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:99:1426,102,0	0/0:5,0:5:15.05:0,15,237	0/0:18,0:16:8.13:0,8,621	0/0:18,0:18:38.95:0,39,611	0/0:17,0:17:48.15:0,48,743	0/0:17,0:17:51.17:0,51,813	0/0:28,0:28:84.29:0,84,1336	1/1:0,20:20:60.20:839,60,0	0/0:16,0:16:48.16:0,48,765	0/0:27,0:27:81.28:0,81,1294	0/0:14,0:14:39.13:0,39,624	0/0:28,0:28:84.26:0,84,1316	0/0:22,0:22:66.19:0,66,1025	0/0:32,0:32:96.33:0,96,1530	0/0:39,0:39:99:0,117,1843	0/0:24,0:24:72.25:0,72,1149	0/0:43,0:43:99:0,129,2039	1/1:0,15:15:45.15:629,45,0	0/0:22,0:22:66.23:0,66,1054	0/0:20,0:20:60.20:0,60,959	0/0:53,0:54:99:0,162,2490	0/0:18,0:18:54.18:0,54,863	0/0:14,0:14:42.14:0,42,668	0/0:42,0:42:99:0,120,1893	0/0:25,0:25:75.26:0,75,1198	0/1:2,12:14:53.83:461,0,54	0/0:33,0:33:96.33:0,96,1532	1/1:0,6:6:12.04:168,12,0
chr10	98859851	.	CA	C	2147.98	PASS	AB=0.776;AC=10;AF=0.179;AN=56;BaseQRankSum=10.062;DP=530;FS=0.000;HRun=10;HaplotypeScore=52.8931;InbreedingCoeff=0.7163;MQ=72.57;MQ0=0;MQRankSum=-0.940;QD=17.46;ReadPosRankSum=-2.239;VQSLOD=3.1785;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:34:89.98:781,90,0	0/0:11,0:11:30.07:0,30,324	0/1:12,0:12:12.25:12,0,139	0/0:6,0:7:6.03:0,6,40	0/0:40,2:42:62.18:0,62,1134	0/0:10,0:10:30.08:0,30,332	0/0:7,0:7:21.06:0,21,232	1/1:9,24:33:71.90:612,72,0	0/0:12,0:12:24.05:0,24,255	0/0:15,0:15:39.10:0,39,425	0/0:28,1:29:37.12:0,37,638	0/0:19,0:19:31.31:0,31,503	0/0:15,0:15:42.11:0,42,465	0/0:22,0:22:57.15:0,57,623	0/0:21,1:22:34.09:0,34,597	0/0:20,0:20:54.13:0,54,589	0/0:22,0:23:66.01:0,66,711	0/1:3,13:16:21.40:287,0,21	0/0:15,0:16:35.93:0,36,379	0/0:23,0:23:57.10:0,57,610	0/0:11,0:11:33.09:0,33,365	0/0:21,0:21:57.15:0,57,631	0/0:25,0:25:69.19:0,69,763	0/0:11,1:12:7.04:0,7,306	0/0:17,1:18:25.07:0,25,492	1/1:1,21:22:59.96:516,60,0	0/0:24,0:27:74.85:0,75,776	1/1:2,4:6:11.99:104,12,0
chr10	98860300	.	T	TGCGCGTGC	713.74	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=1.068;DP=503;FS=0.000;HRun=0;HaplotypeScore=134.8656;InbreedingCoeff=0.6606;MQ=70.64;MQ0=3;MQRankSum=-5.911;QD=14.87;ReadPosRankSum=1.189;VQSLOD=2.8089;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,10:17:2.70:93,3,0	0/0:9,0:9:24.02:0,24,606	0/0:21,0:13:20.79:0,21,432	0/0:16,0:13:9.85:0,10,120	0/0:10,0:10:18.05:0,18,416	0/0:21,0:21:48.16:0,48,1264	0/0:26,0:26:63.19:0,63,1453	0/0:29,0:29:47.46:0,47,1403	0/0:18,0:17:45.15:0,45,1215	0/0:14,0:14:41.96:0,42,871	0/0:14,0:14:33.10:0,33,850	0/0:23,0:23:54.13:0,54,1385	0/0:19,0:19:54.17:0,54,1299	0/0:27,0:27:75.24:0,75,1951	0/0:14,0:14:42.13:0,42,1028	0/1:14,0:14:33.48:33,0,314	0/0:25,0:25:68.98:0,69,1618	1/1:7,8:16:23.75:705,24,0	0/0:18,0:18:42.14:0,42,1119	0/0:16,0:16:42.12:0,42,995	0/0:30,0:30:66.68:0,67,1645	0/0:14,0:14:36.11:0,36,912	0/0:12,0:12:36.04:0,36,763	0/0:25,0:24:60.21:0,60,1558	0/0:12,0:12:30.09:0,30,770	0/0:10,0:10:24.08:0,24,628	0/0:20,0:20:51.12:0,51,1307	0/0:11,0:11:27.09:0,27,584
chr10	98860307	.	GCA	G	478.90	PASS	AB=0.894;AC=14;AF=0.259;AN=54;BaseQRankSum=5.258;DP=494;FS=1.379;HRun=0;HaplotypeScore=69.5041;InbreedingCoeff=-0.0567;MQ=63.51;MQ0=3;MQRankSum=0.125;QD=1.95;ReadPosRankSum=-2.107;VQSLOD=1.5031;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:11:0:0,0,0	0/0:8,0:8:15.52:0,16,232	0/0:17,0:8:2.37:0,2,8	./.	0/0:7,0:7:12.03:0,12,162	0/0:16,0:17:21.04:0,21,283	0/0:23,3:26:1.81:0,2,454	1/1:16,13:29:38.02:338,38,0	0/0:16,1:17:4.27:0,4,442	0/1:14,1:15:13.53:14,0,162	0/1:10,1:11:19.28:19,0,149	0/0:21,2:23:4.74:0,5,463	0/1:20,1:22:16.43:16,0,421	0/0:26,0:26:35.37:0,35,719	0/1:16,1:18:39.86:40,0,257	0/0:14,0:20:14.99:0,15,129	0/1:23,2:25:11.44:11,0,662	0/0:11,0:11:21.35:0,21,142	0/1:13,3:16:37.23:37,0,180	0/0:14,0:14:27.06:0,27,392	0/1:29,7:37:42.93:43,0,515	0/0:15,0:15:33.04:0,33,459	0/1:10,1:11:16.23:16,0,192	0/1:25,1:26:30.24:30,0,351	0/0:12,0:12:20.98:0,21,231	0/0:10,0:10:14.94:0,15,177	0/1:17,5:22:30.19:30,0,412	1/1:8,3:11:3.01:34,3,0
chr10	98860504	.	ACT	A	3018.07	PASS	AB=0.528;AC=5;AF=0.089;AN=56;BaseQRankSum=9.802;DP=666;FS=2.804;HRun=0;HaplotypeScore=77.8788;InbreedingCoeff=0.7773;MQ=86.73;MQ0=0;MQRankSum=-0.308;QD=41.92;ReadPosRankSum=-1.869;VQSLOD=4.9038;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,2604	0/0:7,0:7:21.07:0,21,427	0/0:23,0:24:62.12:0,62,1154	0/0:21,0:21:63.14:0,63,1151	0/0:18,0:18:54.16:0,54,1050	0/0:21,0:21:63.20:0,63,1242	0/0:36,0:36:99:0,108,2081	1/1:0,34:34:99:1610,102,0	0/0:19,0:19:57.20:0,57,1144	0/0:23,0:23:66.23:0,66,1333	0/0:8,0:8:24.08:0,24,487	0/0:22,0:22:66.20:0,66,1301	0/0:24,0:24:72.23:0,72,1397	0/0:32,0:32:96.33:0,96,1912	0/0:25,0:25:75.26:0,75,1522	0/0:24,0:24:69.21:0,69,1326	0/0:39,0:39:99:0,111,2085	0/0:42,0:42:99:0,126,2391	0/0:15,0:15:42.12:0,42,814	0/0:17,0:17:51.18:0,51,1034	0/0:43,0:43:99:0,129,2607	0/0:15,0:15:45.14:0,45,877	0/0:17,0:17:48.16:0,48,974	0/0:23,0:23:69.22:0,69,1365	0/0:14,0:14:39.12:0,39,757	0/1:3,25:28:37.65:1147,0,38	0/0:22,0:21:66.19:0,66,1265	1/1:0,10:10:24.08:391,24,0
chr10	98861331	.	G	GCCCAGGGACGGCACCA	3191.47	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-1.699;DP=502;FS=49.553;HRun=0;HaplotypeScore=191.2444;InbreedingCoeff=0.8869;MQ=58.62;MQ0=0;MQRankSum=-4.036;QD=45.59;ReadPosRankSum=-2.802;VQSLOD=1.3710;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,9:18:18.06:1219,18,0	0/0:4,0:4:9.03:0,9,230	0/0:19,0:18:45.56:0,46,1487	0/0:14,0:12:27.08:0,27,945	0/0:20,0:20:54.19:0,54,2162	0/0:27,0:27:66.23:0,66,2765	0/0:23,0:23:63.22:0,63,2384	1/1:8,0:6:2.99:23,3,0	0/0:23,0:23:63.22:0,63,2824	0/0:16,0:16:39.13:0,39,1510	0/0:7,0:7:21.07:0,21,872	0/0:15,0:15:39.13:0,39,1518	0/0:11,0:11:30.10:0,30,1242	0/0:17,0:17:51.16:0,51,1975	0/0:26,0:26:72.25:0,72,3031	0/0:11,0:11:30.10:0,30,1337	0/0:37,0:37:99:0,108,4576	1/1:3,4:9:6.02:471,6,0	0/0:22,0:22:66.23:0,66,2682	0/0:9,0:9:27.09:0,27,1065	0/0:37,0:37:99:0,99,3852	0/0:24,0:24:66.21:0,66,2873	0/0:15,0:15:42.14:0,42,1688	0/0:38,0:38:96.33:0,96,3950	0/0:10,0:10:30.10:0,30,1278	1/1:6,6:20:36.12:1459,36,0	0/0:7,0:7:21.05:0,21,765	1/1:3,0:3:6.01:173,6,0
chr10	98861914	.	TGG	T	1635.44	PASS	AB=0.556;AC=11;AF=0.196;AN=56;BaseQRankSum=10.316;DP=379;FS=3.900;HRun=11;HaplotypeScore=59.5152;InbreedingCoeff=0.7219;MQ=82.16;MQ0=4;MQRankSum=-0.697;QD=15.73;ReadPosRankSum=6.686;VQSLOD=1.5649;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,31:35:87.17:923,87,0	0/0:1,0:1:3.01:0,3,46	0/0:26,0:18:22.59:0,23,257	0/0:20,0:14:3.76:0,4,131	0/0:14,0:15:17.03:0,17,194	0/0:12,0:13:29.55:0,30,361	0/0:16,0:16:41.61:0,42,572	1/1:2,1:17:41.42:199,41,0	0/0:11,0:11:24.05:0,24,327	0/0:11,0:12:9.03:0,9,139	0/0:8,0:8:15.04:0,15,211	0/0:7,0:15:9:0,9,82	0/0:11,0:13:23.44:0,23,323	0/0:6,0:10:12.03:0,12,143	0/0:8,0:9:23.55:0,24,303	1/1:2,0:15:2.63:34,3,0	0/0:19,0:19:53.17:0,53,717	1/1:1,16:17:45.09:479,45,0	0/0:20,0:21:38.59:0,39,518	0/0:15,0:15:14.72:0,15,187	0/0:8,0:8:11.70:0,12,183	0/0:6,0:6:12.02:0,12,160	0/0:7,0:7:15.03:0,15,208	0/0:6,0:12:16:0,16,127	0/0:11,0:11:23.79:0,24,293	0/1:3,0:15:10.60:107,0,11	0/0:5,0:5:9.02:0,9,118	1/1:0,0:5:13.72:60,14,0
chr10	98863920	.	ATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	A	1871.12	PASS	AB=0.869;AC=4;AF=0.071;AN=56;BaseQRankSum=5.233;DP=670;FS=20.751;HRun=0;HaplotypeScore=446.9492;InbreedingCoeff=0.4496;MQ=71.31;MQ0=19;MQRankSum=-5.364;QD=23.69;ReadPosRankSum=0.917;VQSLOD=0.1381;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,13:32:24.08:1663,24,0	0/0:7,0:7:18.06:0,18,1837	0/0:45,0:25:24.08:0,24,1119	0/0:48,0:24:21.07:0,21,1023	0/0:20,0:20:36.12:0,36,4243	0/0:22,0:21:36.12:0,36,3317	0/0:21,0:21:42.35:0,42,4544	0/0:26,0:25:48.16:0,48,3335	0/0:15,0:18:36.12:0,36,3923	0/0:25,0:25:56.56:0,57,5087	0/0:20,0:20:33.11:0,33,3366	0/0:25,0:25:52.31:0,52,5399	0/0:13,0:13:24.55:0,25,2873	0/0:24,0:24:51.17:0,51,4265	0/0:23,0:23:44.75:0,45,4496	0/1:20,0:31:99:196,0,661	0/0:35,0:35:66.70:0,67,8109	0/1:16,0:15:99:127,0,209	0/0:17,0:17:15.05:0,15,1459	0/0:10,0:10:20.81:0,21,2068	0/0:48,0:47:71.96:0,72,6068	0/0:22,0:22:42.14:0,42,4717	0/0:12,0:12:27.09:0,27,2689	0/0:31,0:31:66.23:0,66,7628	0/0:21,0:20:42.14:0,42,4587	0/0:24,0:24:57.20:0,57,4214	0/0:16,0:19:38.35:0,38,2924	0/0:15,0:15:33.11:0,33,3158
chr10	98866218	.	ACT	A	3708.74	PASS	AB=0.523;AC=11;AF=0.196;AN=56;BaseQRankSum=14.681;DP=1064;FS=2.880;HRun=0;HaplotypeScore=141.2341;InbreedingCoeff=0.8762;MQ=61.71;MQ0=6;MQRankSum=-2.628;QD=20.16;ReadPosRankSum=-2.109;VQSLOD=3.5032;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,10:15:17.38:237,17,0	0/0:19,0:19:54.17:0,54,959	0/0:23,0:16:14.12:0,14,512	0/0:20,0:11:14.55:0,15,312	0/0:35,0:35:99:0,99,1677	0/0:27,0:27:78.25:0,78,1392	0/0:23,0:23:63.19:0,63,1094	1/1:4,27:10:20.95:172,21,0	0/0:65,0:65:99:0,196,3504	0/0:76,0:76:99:0,217,3862	0/0:32,0:32:96.29:0,96,1669	0/0:62,0:62:99:0,187,3300	0/0:60,0:60:99:0,172,3057	0/0:45,0:45:99:0,132,2356	0/0:58,0:58:99:0,169,2997	0/1:5,52:52:89.72:870,0,90	0/0:24,0:24:51.10:0,51,867	1/1:3,19:18:33.11:472,33,0	0/0:19,0:19:45.14:0,45,743	0/0:44,0:44:99:0,129,2208	0/0:72,1:71:99:0,201,3587	0/0:50,0:50:99:0,144,2567	0/0:33,0:33:96.29:0,96,1667	0/0:20,0:20:48.04:0,48,839	0/0:33,0:33:90.27:0,90,1554	1/1:3,39:37:99:1443,102,0	0/0:39,0:39:99:0,111,2017	1/1:0,16:16:35.96:515,36,0
chr10	98866394	.	CACACAT	C	5484.38	PASS	AB=0.782;AC=6;AF=0.107;AN=56;BaseQRankSum=15.136;DP=1144;FS=3.825;HRun=0;HaplotypeScore=245.5655;InbreedingCoeff=0.2526;MQ=54.69;MQ0=43;MQRankSum=-10.504;QD=28.13;ReadPosRankSum=-1.586;VQSLOD=4.3629;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:31:31.04:31,0,122	0/0:11,0:11:33.11:0,33,1074	0/0:30,0:8:24.03:0,24,547	0/0:46,0:8:24.08:0,24,709	0/0:37,0:37:96.29:0,96,2952	0/0:28,0:28:72.23:0,72,2411	0/0:31,0:31:78.27:0,78,2602	1/1:13,38:43:99:2190,106,0	0/0:66,0:66:99:0,190,6500	0/0:73,0:71:99:0,196,6476	0/0:24,0:24:66.21:0,66,2177	0/0:64,0:64:99:0,181,5950	0/0:62,0:62:99:0,172,5651	0/0:49,0:49:99:0,144,4738	0/0:70,0:70:99:0,199,6639	0/0:67,0:66:99:0,157,5104	0/0:18,0:18:38.81:0,39,1244	0/1:27,0:27:93.26:94,0,93	0/0:15,0:11:27.09:0,27,914	0/0:38,0:38:99:0,99,3249	0/0:61,0:59:99:0,163,5311	0/0:39,0:39:87.30:0,87,2945	0/0:28,0:28:75.26:0,75,2598	0/0:21,0:21:57.20:0,57,1928	0/0:29,0:29:78.27:0,78,2501	0/1:22,44:66:99:2645,0,1282	0/0:42,0:42:99:0,108,3723	0/1:2,17:19:78.34:525,0,78
chr10	98866396	.	CACAT	C	3637.86	PASS	AB=0.803;AC=6;AF=0.107;AN=56;BaseQRankSum=15.895;DP=1123;FS=4.419;HRun=0;HaplotypeScore=207.1623;InbreedingCoeff=0.2525;MQ=54.87;MQ0=35;MQRankSum=-10.581;QD=19.45;ReadPosRankSum=-1.402;VQSLOD=3.1902;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,17:30:79.54:530,0,80	0/0:11,0:11:33.11:0,33,848	0/0:28,0:8:24.03:0,24,449	0/0:43,0:8:24.08:0,24,571	0/0:37,0:37:99:0,99,2260	0/0:27,0:27:72.23:0,72,1875	0/0:32,0:32:81.26:0,81,2059	1/1:47,0:41:92.72:1004,93,0	0/0:65,0:65:99:0,190,5076	0/0:71,0:69:99:0,201,5117	0/0:24,0:24:66.21:0,66,1676	0/0:64,0:64:99:0,184,4603	0/0:60,0:60:99:0,172,4338	0/0:50,0:50:99:0,150,3820	0/0:68,0:68:99:0,199,5221	0/0:64,0:63:99:0,156,3946	0/0:19,0:19:32.95:0,33,968	0/1:6,20:26:41.42:809,0,41	0/0:14,0:11:27.09:0,27,718	0/0:36,0:36:99:0,99,2483	0/0:62,0:60:99:0,169,4282	0/0:39,0:39:90.23:0,90,2259	0/0:29,0:29:78.27:0,78,2068	0/0:23,0:23:63.20:0,63,1597	0/0:29,0:29:81.24:0,81,1953	0/1:64,0:64:99:1081,0,895	0/0:41,0:41:99:0,108,2879	0/1:19,0:19:54.02:214,0,54
chr10	98866653	.	AGTT	A	5011.47	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.603;DP=477;FS=2.934;HRun=0;HaplotypeScore=73.3338;InbreedingCoeff=0.9917;MQ=63.29;MQ0=0;MQRankSum=-7.821;QD=48.66;ReadPosRankSum=-3.191;VQSLOD=5.9475;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,15:25:60.12:1026,60,0	0/0:5,0:5:15.05:0,15,369	0/0:30,0:29:78.14:0,78,1656	0/0:16,0:16:48.16:0,48,1145	0/0:13,0:13:39.13:0,39,929	0/0:16,0:16:45.15:0,45,1106	0/0:13,0:13:39.12:0,39,885	1/1:0,28:27:81.25:1435,81,0	0/0:20,0:20:60.19:0,60,1423	0/0:22,0:21:63.20:0,63,1456	0/0:10,0:10:30.10:0,30,739	0/0:21,0:21:63.22:0,63,1519	0/0:17,0:17:51.16:0,51,1204	0/0:18,0:18:54.14:0,54,1223	0/0:26,0:26:78.04:0,78,1780	0/0:18,0:18:51.18:0,51,1256	0/0:18,0:18:51:0,51,1112	1/1:0,16:16:45.15:835,45,0	0/0:11,0:11:33.10:0,33,740	0/0:14,0:14:42.13:0,42,985	0/0:30,0:30:87.28:0,87,2088	0/0:13,0:13:39.10:0,39,898	0/0:5,0:5:15.05:0,15,369	0/0:17,0:17:48.14:0,48,1129	0/0:8,0:8:24.08:0,24,591	1/1:3,20:23:69.18:1216,69,0	0/0:13,0:13:39.13:0,39,959	1/1:0,10:10:27.09:500,27,0
chr10	98866719	.	TCTGCCTCTGCCCCTGCCCCTGCCC	T	1735.36	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=3.917;DP=236;FS=15.029;HRun=0;HaplotypeScore=133.7938;InbreedingCoeff=0.7174;MQ=52.86;MQ0=9;MQRankSum=-6.103;QD=52.59;ReadPosRankSum=1.652;VQSLOD=2.2763;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,3:19:50.52:857,51,0	0/0:2,0:2:6.01:0,6,364	0/0:12,0:8:18.04:0,18,427	0/0:10,0:8:15.57:0,16,226	0/0:5,0:5:12.03:0,12,615	0/0:7,0:7:15.03:0,15,1073	0/0:9,0:9:27.05:0,27,751	0/0:13,0:12:36.09:0,36,778	0/0:10,0:10:24.08:0,24,2213	0/0:5,0:4:12.04:0,12,600	0/0:3,0:3:6.01:0,6,219	0/0:8,0:8:21.04:0,21,1172	0/0:10,0:10:27.04:0,27,837	0/0:10,0:10:24.07:0,24,1428	0/0:9,0:9:24.08:0,24,1668	0/0:8,0:8:21.06:0,21,1286	0/0:13,0:13:39.10:0,39,2438	1/1:8,4:12:32.65:998,33,0	0/0:12,0:11:33.08:0,33,1437	0/0:6,0:5:9:0,9,88	0/0:15,0:14:42.08:0,42,2501	0/0:6,0:6:3.47:0,3,27	./.	0/0:11,0:11:32.98:0,33,1534	0/0:7,0:6:15.04:0,15,858	0/0:2,0:2:6.02:0,6,123	0/0:4,0:4:12.03:0,12,750	0/0:5,0:5:15.05:0,15,367
chr10	98866874	.	GAAA	G	1233.97	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.251;DP=261;FS=3.378;HRun=11;HaplotypeScore=40.1938;InbreedingCoeff=0.7633;MQ=63.83;MQ0=6;MQRankSum=-1.062;QD=20.23;ReadPosRankSum=3.813;VQSLOD=0.9535;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:22:51.16:670,51,0	0/0:2,0:2:6.02:0,6,118	1/1:13,0:4:1.79:5,2,0	0/0:18,0:10:6.76:0,7,177	0/0:14,0:14:35.15:0,35,658	0/0:8,0:8:18.06:0,18,343	0/0:4,0:4:12.04:0,12,243	0/0:22,0:22:54.15:0,54,867	0/0:8,0:8:21.07:0,21,410	0/0:11,0:11:30.10:0,30,589	0/0:6,0:7:18.01:0,18,287	0/0:9,0:9:27.09:0,27,517	0/0:3,0:3:9.03:0,9,179	0/0:6,0:6:15.05:0,15,289	0/0:13,0:13:33.07:0,33,622	1/1:10,0:9:17.45:111,17,0	0/0:17,0:17:51.14:0,51,935	1/1:0,15:15:45.15:591,45,0	0/0:16,0:15:36.12:0,36,694	0/0:4,0:5:13.27:0,13,204	0/0:5,0:5:15.05:0,15,293	0/0:2,0:2:3.01:0,3,61	0/0:3,0:3:9.02:0,9,148	0/0:4,0:4:12:0,12,198	0/0:8,0:8:21.07:0,21,389	0/0:4,0:4:12.04:0,12,185	0/0:6,0:6:18.06:0,18,348	0/0:3,0:3:9.03:0,9,137
chr10	98866883	.	AAAT	A	646.62	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=7.589;DP=275;FS=3.267;HRun=0;HaplotypeScore=46.9791;InbreedingCoeff=0.5540;MQ=75.46;MQ0=5;MQRankSum=-2.431;QD=9.80;ReadPosRankSum=5.331;VQSLOD=2.4509;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:21:8.77:260,9,0	0/0:3,0:3:9.03:0,9,137	1/1:4,0:4:1.82:6,2,0	0/0:15,0:11:20.04:0,20,217	0/0:13,0:13:33.57:0,34,579	0/0:9,0:8:18.03:0,18,276	0/0:6,0:6:18.05:0,18,331	0/0:23,0:23:66.13:0,66,894	0/0:10,0:10:30.05:0,30,426	0/0:15,0:15:45.11:0,45,692	0/0:10,0:10:27.03:0,27,404	0/0:12,0:12:36.06:0,36,502	0/0:3,0:3:9.03:0,9,161	0/0:5,0:5:15.04:0,15,284	0/0:11,0:11:30.10:0,30,613	1/1:1,12:12:17.79:274,18,0	0/0:19,0:19:54.07:0,54,920	0/1:19,0:19:13.34:231,0,13	0/0:16,0:15:45.11:0,45,760	0/1:7,0:7:2.32:2,0,213	0/0:6,0:6:18.04:0,18,248	0/0:1,0:1:3.01:0,3,64	0/0:5,0:5:12.01:0,12,179	0/0:5,0:5:12.02:0,12,184	0/0:8,0:8:21.53:0,22,379	0/0:4,0:4:12.04:0,12,183	0/0:6,0:6:18.06:0,18,370	0/0:4,0:3:9.03:0,9,131
chr10	98866884	.	A	AAT	634.13	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-5.662;DP=273;FS=0.947;HRun=0;HaplotypeScore=43.5435;InbreedingCoeff=0.7037;MQ=75.53;MQ0=5;MQRankSum=1.832;QD=17.61;ReadPosRankSum=-0.652;VQSLOD=3.0454;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:56.43:0,56,393	0/0:3,0:3:6.01:0,6,62	1/1:5,0:4:2.04:6,2,0	0/0:14,0:10:10.77:0,11,65	0/0:13,0:13:18.05:0,18,216	0/0:9,0:8:9.50:0,9,108	0/0:6,0:6:18.04:0,18,196	1/1:8,13:23:9.11:518,9,0	0/0:10,0:10:21.03:0,21,221	0/0:15,0:15:36.08:0,36,392	0/0:10,0:10:27.02:0,27,274	0/0:12,0:12:21.04:0,21,223	0/0:3,0:3:6.01:0,6,61	0/0:5,0:5:15.04:0,15,170	0/0:11,0:11:27.06:0,27,309	0/0:12,0:12:16.82:0,17,84	0/0:19,0:19:45.09:0,45,498	0/0:19,0:19:56.47:0,56,397	0/0:16,0:15:36.09:0,36,404	0/0:6,0:7:14.99:0,15,144	0/0:6,0:6:9.02:0,9,98	0/0:1,0:1:3:0,3,25	0/0:4,0:4:12.02:0,12,124	0/0:5,0:5:9.01:0,9,96	0/0:8,0:8:18.04:0,18,198	1/1:2,2:4:6.49:95,6,0	0/0:6,0:6:15.04:0,15,180	1/1:1,3:3:9.03:141,9,0
chr10	98868331	.	C	CTTTTT	1673.93	PASS	AB=0.559;AC=9;AF=0.161;AN=56;BaseQRankSum=5.882;DP=442;FS=1.064;HRun=10;HaplotypeScore=88.1503;InbreedingCoeff=0.7808;MQ=69.83;MQ0=1;MQRankSum=-1.807;QD=15.22;ReadPosRankSum=-1.135;VQSLOD=-0.2441;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,12:21:20.99:585,21,0	0/0:11,0:11:23.99:0,24,386	0/0:8,0:7:8.95:0,9,104	0/0:8,0:6:5.92:0,6,72	0/0:23,0:23:60.12:0,60,941	0/0:13,0:13:36.08:0,36,579	0/0:8,0:8:14.95:0,15,241	1/1:9,0:30:41.52:206,42,0	0/0:18,0:18:48.16:0,48,772	0/0:12,0:12:26.99:0,27,427	0/0:26,0:28:83.77:0,84,1294	0/0:10,0:11:28.75:0,29,399	0/0:11,0:11:27.03:0,27,434	0/0:12,0:12:27.06:0,27,430	0/0:21,0:21:57.12:0,57,913	0/0:1,0:16:1.79:0,2,86	0/0:23,0:23:54.02:0,54,837	1/1:4,7:17:27.09:664,27,0	0/0:18,0:17:45.12:0,45,705	0/0:11,0:12:33.10:0,33,512	0/0:8,0:9:17.45:0,17,250	0/0:4,0:4:8.99:0,9,96	0/0:18,0:18:51.14:0,51,820	0/0:13,0:13:33.04:0,33,527	0/0:13,0:14:42.14:0,42,657	0/1:4,0:19:9.51:143,0,10	0/0:19,0:19:54.08:0,54,790	1/1:3,0:22:43.51:238,44,0
chr10	98868814	.	C	CA	1015.84	PASS	AB=0.788;AC=6;AF=0.107;AN=56;BaseQRankSum=-5.662;DP=551;FS=0.565;HRun=11;HaplotypeScore=62.9929;InbreedingCoeff=0.5630;MQ=72.43;MQ0=1;MQRankSum=-1.518;QD=12.70;ReadPosRankSum=-2.296;VQSLOD=2.9495;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:28:62.71:0,63,485	0/0:7,0:7:14.93:0,15,116	0/1:20,0:15:2.81:3,0,122	0/0:9,1:8:7.03:0,7,38	0/0:24,0:24:44.75:0,45,343	0/0:16,0:16:32.85:0,33,255	0/0:17,0:17:33.59:0,34,292	1/1:9,20:29:58.24:546,58,0	0/0:20,0:20:29.82:0,30,232	0/0:27,1:29:32.84:0,33,512	0/0:14,1:16:4.44:0,4,207	0/0:17,0:17:35.83:0,36,279	0/0:23,0:24:40.76:0,41,300	0/0:19,0:19:41.54:0,42,314	0/0:25,2:27:1.87:0,2,380	0/0:21,0:21:50.59:0,51,381	0/0:19,2:21:26.33:0,26,387	0/0:27,0:27:62.64:0,63,480	0/0:15,0:15:32.84:0,33,254	0/0:15,0:15:38.82:0,39,301	0/0:18,0:18:41.80:0,42,325	0/0:23,0:24:52.81:0,53,398	0/0:20,1:21:47.75:0,48,369	0/0:18,0:18:41.82:0,42,325	0/0:17,0:17:38.76:0,39,295	0/1:5,14:19:27.63:293,0,28	0/0:20,0:20:38.71:0,39,297	1/1:0,11:11:30.06:304,30,0
chr10	98869161	.	G	GACAC	402.84	PASS	AB=1.000;AC=10;AF=0.200;AN=50;BaseQRankSum=0.325;DP=586;FS=0.000;HRun=0;HaplotypeScore=116.6105;InbreedingCoeff=0.2306;MQ=57.22;MQ0=17;MQRankSum=-0.777;QD=2.84;ReadPosRankSum=-0.703;VQSLOD=2.0950;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:24:311,24,0	0/0:5,0:5:3.01:0,3,46	./.	./.	0/0:7,0:7:2.87:0,3,44	0/0:18,0:18:21.49:0,21,261	0/0:22,0:24:9.02:0,9,100	./.	0/1:16,0:16:0.82:1,0,105	0/0:24,0:24:2.52:0,3,45	0/0:7,0:7:3.88:0,4,26	0/0:10,0:12:9.02:0,9,120	0/0:13,0:13:12.03:0,12,163	0/0:18,0:18:15.04:0,15,211	0/1:21,0:21:4.74:5,0,252	1/1:12,13:29:8.37:192,8,0	0/1:20,0:21:0.59:1,0,206	0/0:16,0:23:2.29:0,2,75	1/1:14,0:13:0.47:1,0,0	0/0:11,0:11:2.77:0,3,44	0/0:70,0:69:10.97:0,11,207	0/0:20,0:19:5.96:0,6,45	0/0:12,0:11:6.02:0,6,92	0/0:28,0:28:9.59:0,10,392	0/0:13,0:13:5.73:0,6,37	0/0:11,0:19:5.80:0,6,41	0/0:15,0:16:5.91:0,6,50	0/1:1,0:3:7.02:7,0,22
chr10	98870339	.	AG	A	1888.09	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.950;DP=545;FS=18.801;HRun=9;HaplotypeScore=54.0432;InbreedingCoeff=0.9327;MQ=71.70;MQ0=2;MQRankSum=-0.488;QD=18.33;ReadPosRankSum=0.115;VQSLOD=2.2052;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:30:72.04:659,72,0	0/0:9,0:9:24.05:0,24,266	0/0:21,0:18:44.73:0,45,461	0/0:17,0:15:26.95:0,27,308	0/0:14,0:14:36.09:0,36,404	0/0:18,1:19:14.79:0,15,422	0/0:23,0:23:57.17:0,57,657	1/1:4,18:20:51.01:462,51,0	0/0:11,0:11:33.09:0,33,370	0/0:17,1:18:11.64:0,12,379	0/0:22,0:22:48.13:0,48,544	0/0:27,0:27:69.19:0,69,786	0/0:15,0:15:39.10:0,39,441	0/0:28,0:28:78.19:0,78,870	0/0:24,0:24:63.18:0,63,722	0/0:19,0:19:54.15:0,54,614	0/0:13,0:13:36.09:0,36,406	1/1:4,14:17:1.40:267,1,0	0/0:16,0:16:21.06:0,21,469	0/0:14,0:15:38.92:0,39,410	0/0:31,0:31:81.23:0,81,926	0/0:18,0:18:45.08:0,45,480	0/0:10,0:10:24.06:0,24,267	0/0:29,0:29:75.22:0,75,866	0/0:18,0:18:42.12:0,42,483	1/1:8,13:21:50.79:446,51,0	0/0:25,0:25:66.18:0,66,750	1/1:3,9:12:24.01:220,24,0
chr10	98870427	.	CT	C	1308.12	PASS	AB=0.857;AC=7;AF=0.125;AN=56;BaseQRankSum=6.945;DP=548;FS=4.147;HRun=9;HaplotypeScore=55.9861;InbreedingCoeff=0.8403;MQ=67.77;MQ0=3;MQRankSum=-0.237;QD=18.17;ReadPosRankSum=0.294;VQSLOD=3.8608;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.24:0,87,985	0/1:5,1:6:12.35:12,0,122	0/0:20,0:18:26.27:0,26,248	0/0:17,1:15:21.03:0,21,224	0/0:13,0:13:27.08:0,27,312	0/0:23,0:22:48.13:0,48,542	0/0:22,0:22:60.18:0,60,692	1/1:3,21:22:56.98:510,57,0	0/0:18,0:18:36.06:0,36,392	0/0:16,0:16:33.10:0,33,381	0/0:18,0:18:45.13:0,45,519	0/0:20,0:20:54.15:0,54,613	0/0:18,0:18:51.15:0,51,587	0/0:25,0:25:66.17:0,66,749	0/0:37,0:36:87.26:0,87,1002	0/0:20,0:20:48.13:0,48,543	0/0:14,0:14:42.02:0,42,466	0/0:23,0:24:59.82:0,60,638	0/0:25,0:25:63.16:0,63,708	0/0:15,0:15:42.12:0,42,484	0/0:10,0:10:30.09:0,30,345	0/0:8,0:8:18.03:0,18,189	0/0:22,0:22:54.16:0,54,622	0/0:22,0:22:48.14:0,48,552	0/0:12,0:12:33.10:0,33,380	1/1:7,21:27:63.03:577,63,0	0/0:21,0:21:51.15:0,51,588	1/1:0,14:13:39.02:357,39,0
chr10	98871037	.	G	GT	1544.36	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.846;DP=546;FS=2.380;HRun=9;HaplotypeScore=51.7767;InbreedingCoeff=0.8554;MQ=68.21;MQ0=0;MQRankSum=-1.190;QD=22.71;ReadPosRankSum=-3.632;VQSLOD=2.9649;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:76.30:0,76,793	0/0:5,0:5:14.99:0,15,128	0/0:14,0:13:17.87:0,18,194	0/0:6,0:6:5.51:0,6,71	0/0:19,0:19:41.98:0,42,365	0/0:25,0:25:62.95:0,63,539	0/0:21,0:23:58.01:0,58,469	1/1:6,26:33:52.14:789,52,0	0/0:12,0:12:32.98:0,33,286	0/0:23,0:24:64.70:0,65,537	0/0:20,0:20:44.96:0,45,387	0/0:24,0:24:56.93:0,57,485	0/0:11,0:11:32.99:0,33,286	0/0:23,0:23:65.99:0,66,573	0/0:23,0:23:65.96:0,66,567	0/0:15,0:16:41.01:0,41,341	0/0:32,0:32:86.83:0,87,739	0/0:21,0:21:56.98:0,57,495	0/0:28,0:28:65.93:0,66,567	0/0:16,0:17:47.02:0,47,396	0/0:12,0:12:29.34:0,29,254	0/0:8,0:8:23.98:0,24,205	0/0:17,1:18:14.81:0,15,357	0/0:14,0:14:38.01:0,38,316	0/0:23,0:24:62:0,62,524	1/1:4,22:26:19.75:655,20,0	0/0:25,0:25:68.97:0,69,595	1/1:1,8:9:1:230,1,0
chr10	98871709	.	C	CGT	3093.19	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-8.913;DP=611;FS=3.580;HRun=0;HaplotypeScore=81.6911;InbreedingCoeff=0.9410;MQ=66.26;MQ0=2;MQRankSum=-0.316;QD=24.55;ReadPosRankSum=-0.558;VQSLOD=4.1927;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:31:9.71:71,10,0	0/0:9,0:9:24.08:0,24,297	0/0:28,0:19:35.84:0,36,402	0/0:33,0:27:31.63:0,32,595	0/0:22,0:22:57.17:0,57,703	0/0:15,0:15:42.13:0,42,530	0/0:27,0:27:78.22:0,78,956	1/1:12,25:38:78.24:1230,78,0	0/0:21,0:21:60.15:0,60,739	0/0:18,0:18:48.11:0,48,576	0/0:8,0:8:18.06:0,18,227	0/0:28,0:28:72.22:0,72,895	0/0:18,0:18:51.15:0,51,630	0/0:16,0:16:42.13:0,42,529	0/0:14,0:14:33.10:0,33,404	1/1:1,18:19:42.14:698,42,0	0/0:26,0:26:69.19:0,69,843	0/0:17,0:16:0.18:0,0,2	0/0:27,0:27:65.90:0,66,831	0/0:14,0:14:36.11:0,36,454	0/0:56,0:58:99:0,132,1807	0/0:16,0:16:39.12:0,39,491	0/0:10,0:10:27.07:0,27,322	0/0:25,0:25:75.24:0,75,945	0/0:17,0:17:39.11:0,39,478	1/1:5,20:26:63.20:1015,63,0	0/0:18,0:17:54.01:0,54,639	1/1:1,10:11:15.05:249,15,0
chr10	98872472	.	AT	A	3732.83	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.497;DP=668;FS=11.258;HRun=11;HaplotypeScore=71.0162;InbreedingCoeff=0.9594;MQ=78.88;MQ0=1;MQRankSum=1.061;QD=19.65;ReadPosRankSum=1.977;VQSLOD=4.2468;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,57:64:99:1175,144,0	0/0:12,0:12:30.08:0,30,320	0/0:32,2:28:43.20:0,43,403	0/0:24,0:19:18.98:0,19,217	0/0:27,1:28:41.51:0,42,641	0/0:21,0:21:42.08:0,42,433	0/0:23,0:23:57.13:0,57,600	1/1:9,26:35:77.55:617,78,0	0/0:23,0:23:60.15:0,60,639	0/0:25,0:25:63.14:0,63,659	0/0:11,0:11:27.03:0,27,265	0/0:20,0:21:59.91:0,60,589	0/0:17,0:17:39.07:0,39,390	0/0:17,0:17:42.08:0,42,436	0/0:21,0:22:56.98:0,57,590	1/1:3,24:27:71.90:591,72,0	0/0:33,1:36:54.86:0,55,869	1/1:3,27:31:45.44:566,45,0	0/0:10,1:12:2.26:0,2,200	0/0:20,0:20:54.12:0,54,563	0/0:24,0:25:68.98:0,69,703	0/0:19,0:19:47.95:0,48,488	0/0:12,0:14:35.68:0,36,321	0/0:40,0:41:99:0,111,1150	0/0:13,0:14:29.89:0,30,291	1/1:1,21:22:62.91:513,63,0	0/0:18,1:18:29.46:0,29,497	1/1:0,11:11:32.96:271,33,0
chr10	98873860	.	C	CA	866.96	PASS	AB=0.879;AC=14;AF=0.250;AN=56;BaseQRankSum=-3.608;DP=511;FS=4.642;HRun=15;HaplotypeScore=66.7562;InbreedingCoeff=-0.2617;MQ=54.76;MQ0=17;MQRankSum=0.702;QD=3.14;ReadPosRankSum=-2.175;VQSLOD=-0.3012;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,15:35:12.30:211,0,12	0/0:9,0:10:16.12:0,16,86	0/1:11,0:6:2.09:2,0,38	0/0:8,0:5:4.82:0,5,23	0/1:17,0:17:3.28:3,0,76	0/1:14,0:17:0.36:0,0,76	0/0:14,0:14:15.11:0,15,73	0/1:24,11:36:19.89:290,0,20	0/0:13,0:10:12.66:0,13,73	0/0:25,0:27:29.76:0,30,163	0/0:20,1:22:28.60:0,29,167	0/1:8,1:10:4.97:5,0,74	0/0:12,0:11:17.34:0,17,87	0/0:12,0:12:11.49:0,11,71	0/0:16,1:17:35.14:0,35,212	0/0:7,0:13:12.73:0,13,44	0/0:20,1:21:31.89:0,32,177	0/1:16,9:23:21.86:189,0,22	0/0:26,0:26:36.44:0,36,206	0/0:19,0:20:3.16:0,3,122	0/1:10,1:9:11.04:20,0,11	0/1:11,0:11:12.99:13,0,42	0/1:12,3:16:47.86:48,0,73	0/1:19,0:19:0.81:1,0,99	0/1:18,1:19:2.70:3,0,91	0/1:16,6:21:24.40:156,0,24	0/0:13,0:13:14.45:0,14,86	0/1:13,4:14:21.03:61,0,21
chr10	98874126	.	TA	T	2664.06	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=9.936;DP=479;FS=17.994;HRun=10;HaplotypeScore=45.3667;InbreedingCoeff=0.8143;MQ=67.13;MQ0=0;MQRankSum=0.493;QD=18.37;ReadPosRankSum=-0.860;VQSLOD=2.2044;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:30:65.97:573,66,0	0/0:9,0:9:27.07:0,27,299	0/1:10,0:8:1.20:1,0,28	0/0:5,0:4:5.99:0,6,53	0/0:16,0:16:42.11:0,42,464	0/0:16,0:16:45.11:0,45,491	0/0:16,0:16:45.12:0,45,498	1/1:5,27:32:80.97:703,81,0	0/0:13,0:13:39.11:0,39,431	0/0:27,0:27:69.19:0,69,763	0/0:23,0:24:51.11:0,51,542	0/0:10,0:10:30.08:0,30,332	0/0:12,0:12:33.09:0,33,365	0/0:17,0:17:38.83:0,39,488	0/0:21,0:21:51.14:0,51,564	0/0:16,1:18:27.91:0,28,511	0/0:19,0:19:51.12:0,51,554	1/1:1,20:21:53.99:469,54,0	0/0:15,1:16:10.05:0,10,339	0/0:14,0:14:33.09:0,33,365	0/0:14,0:14:39.09:0,39,423	0/0:14,0:14:30.04:0,30,312	0/1:6,0:6:7.69:8,0,141	0/0:17,0:17:45.08:0,45,484	0/0:20,0:21:57.08:0,57,600	1/1:3,31:34:62.80:774,63,0	0/0:15,0:15:42.11:0,42,465	1/1:0,12:12:35.99:313,36,0
chr10	98875186	.	C	CA	1481.75	PASS	AB=0.982;AC=12;AF=0.214;AN=56;BaseQRankSum=1.881;DP=611;FS=13.565;HRun=9;HaplotypeScore=104.8379;InbreedingCoeff=0.7255;MQ=67.18;MQ0=9;MQRankSum=-1.511;QD=12.25;ReadPosRankSum=-1.230;VQSLOD=1.4906;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,2:20:17.21:305,17,0	0/0:8,0:8:14.70:0,15,118	0/0:50,0:14:24.35:0,24,161	0/0:58,0:18:13.72:0,14,139	0/0:33,0:33:57.28:0,57,473	0/0:13,0:13:29.65:0,30,256	0/0:14,0:14:20.50:0,20,150	1/1:21,1:22:26.96:292,27,0	0/0:17,1:18:19.47:0,19,184	0/0:20,0:20:41.50:0,42,335	0/0:19,0:19:4.42:0,4,198	0/0:14,0:14:40.46:0,40,322	0/0:17,0:17:6.28:0,6,219	0/0:22,0:22:40.34:0,40,316	0/0:27,0:27:52.42:0,52,422	0/1:26,1:27:27.04:280,0,27	0/0:21,0:20:38.82:0,39,333	1/1:11,0:11:24:229,24,0	0/0:24,0:23:44.75:0,45,400	0/0:24,0:24:43.56:0,44,406	0/0:13,0:13:17.48:0,17,146	0/0:13,0:13:17.90:0,18,151	0/0:18,1:19:22.10:0,22,241	0/1:11,0:11:14.47:14,0,150	0/0:23,1:25:10.95:0,11,222	1/1:20,0:20:33.05:335,33,0	0/0:34,0:35:52.29:0,52,558	1/1:10,0:10:16.57:205,17,0
chr10	98875214	.	GA	G	319.37	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.463;DP=720;FS=0.000;HRun=10;HaplotypeScore=96.1183;InbreedingCoeff=0.8311;MQ=57.48;MQ0=28;MQRankSum=-2.112;QD=6.14;ReadPosRankSum=1.284;VQSLOD=1.6269;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,13:18:22.22:179,22,0	0/0:7,0:7:20.07:0,20,195	0/0:80,0:13:24.78:0,25,187	0/0:93,0:20:20.88:0,21,166	0/0:32,0:32:70.75:0,71,713	0/0:12,0:12:32.11:0,32,331	0/0:11,0:11:1.01:0,1,202	0/0:36,1:37:62.41:0,62,819	0/0:19,0:19:30.62:0,31,365	0/0:26,0:25:62.45:0,62,677	0/0:20,0:20:48.66:0,49,483	0/0:14,0:14:27.67:0,28,292	0/0:21,0:20:18.68:0,19,379	0/0:22,0:23:59.88:0,60,610	0/0:28,0:28:44.69:0,45,648	1/1:4,18:22:5.73:218,6,0	0/0:21,0:20:41.64:0,42,401	1/1:3,9:12:5.97:47,6,0	0/0:27,0:26:49.02:0,49,462	0/0:25,0:25:27.80:0,28,476	0/0:13,0:12:21.04:0,21,221	0/0:14,0:14:30.95:0,31,317	0/0:20,0:20:37.59:0,38,344	0/0:10,0:9:22.61:0,23,231	0/0:29,0:29:67.39:0,67,748	0/0:27,0:27:61.35:0,61,612	0/0:37,0:36:69.65:0,70,749	0/0:21,0:20:42.10:0,42,452
chr10	98875432	.	CA	C	1095.07	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.757;DP=600;FS=0.000;HRun=8;HaplotypeScore=57.2399;InbreedingCoeff=0.9623;MQ=77.39;MQ0=0;MQRankSum=-3.314;QD=24.33;ReadPosRankSum=2.493;VQSLOD=4.3214;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:87.14:840,87,0	0/0:3,0:3:9.03:0,9,109	0/0:15,0:15:41.77:0,42,454	0/0:13,0:13:27.07:0,27,311	0/0:23,0:23:66.19:0,66,787	0/0:20,0:20:51.16:0,51,616	0/0:24,0:24:72.22:0,72,870	0/0:36,0:36:99:0,102,1223	0/0:22,0:22:60.18:0,60,725	0/0:24,0:24:69.20:0,69,820	0/0:13,0:13:33.10:0,33,399	0/0:19,0:19:51.14:0,51,605	0/0:26,0:26:69.21:0,69,832	0/0:21,0:21:51.16:0,51,615	0/0:29,0:29:84.26:0,84,1015	0/0:22,0:22:60.18:0,60,725	0/0:25,0:25:75.23:0,75,905	1/1:0,13:13:39.06:377,39,0	0/0:23,0:23:51.13:0,51,602	0/0:32,0:33:93.14:0,93,1089	0/0:21,0:21:54.17:0,54,652	0/0:15,0:15:36.11:0,36,435	0/0:22,0:22:66.20:0,66,797	0/0:30,0:30:87.25:0,87,1040	0/0:13,0:13:36.11:0,36,435	0/0:34,0:35:93.15:0,93,1102	0/0:22,0:22:63.19:0,63,756	0/0:6,0:6:15.05:0,15,181
chr10	98878034	.	GGT	G	537.06	PASS	AB=0.898;AC=15;AF=0.300;AN=50;BaseQRankSum=5.874;DP=617;FS=4.348;HRun=0;HaplotypeScore=87.6676;InbreedingCoeff=-0.2881;MQ=63.28;MQ0=9;MQRankSum=-0.441;QD=1.62;ReadPosRankSum=1.152;VQSLOD=0.7966;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:24:9:0,9,95	0/0:4,0:4:3.01:0,3,45	./.	./.	0/0:23,0:23:21.06:0,21,281	0/1:14,1:18:37.03:37,0,200	0/1:19,1:22:14.04:14,0,275	0/0:21,0:19:3.01:0,3,37	0/1:19,5:24:99:101,0,195	0/0:20,0:18:12.02:0,12,134	0/0:19,0:19:17.99:0,18,223	0/1:20,2:22:26.69:27,0,375	0/1:14,0:15:4.58:5,0,82	0/1:24,0:24:50.41:50,0,114	0/1:25,4:30:99:108,0,441	0/1:17,0:22:24.83:64,0,25	0/1:23,3:25:27.80:28,0,434	1/1:15,0:20:11.36:56,11,0	./.	0/0:18,0:17:11.91:0,12,149	0/1:34,3:37:91.65:92,0,203	0/0:24,0:26:3.93:0,4,191	0/0:20,0:19:9.02:0,9,115	0/1:18,7:26:82.55:83,0,239	0/1:29,1:30:2.76:3,0,371	0/0:23,0:27:19.28:0,19,208	0/1:14,0:14:13.88:14,0,188	0/0:12,0:10:6:0,6,68
chr10	98878397	.	T	TGG	3561.44	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-4.621;DP=452;FS=0.000;HRun=1;HaplotypeScore=75.6495;InbreedingCoeff=0.9960;MQ=64.72;MQ0=9;MQRankSum=-5.101;QD=52.37;ReadPosRankSum=0.209;VQSLOD=3.3227;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:54.18:0,54,827	0/0:11,0:10:27.09:0,27,413	0/0:14,0:11:33.10:0,33,454	0/0:13,0:9:27.09:0,27,387	0/0:13,0:13:39.13:0,39,594	0/0:17,0:17:42.08:0,42,622	0/0:13,0:13:36.12:0,36,551	1/1:4,23:27:69.24:1314,69,0	0/0:28,0:28:81.28:0,81,1239	0/0:18,0:18:51.17:0,51,781	0/0:12,0:12:33.11:0,33,505	0/0:17,0:17:45.15:0,45,689	0/0:14,0:14:39.12:0,39,575	0/0:13,0:13:33.11:0,33,505	0/0:15,0:15:45.15:0,45,689	1/1:0,16:16:45.15:868,45,0	0/0:19,0:19:57.17:0,57,847	0/0:16,0:16:45.15:0,45,689	0/0:17,0:16:45.15:0,45,689	0/0:16,0:16:48.15:0,48,714	0/0:13,0:11:33.11:0,33,505	0/0:12,0:11:30.10:0,30,459	0/0:10,0:10:30.10:0,30,459	0/0:26,1:27:17.36:0,17,1033	0/0:18,0:15:39.13:0,39,591	1/1:1,13:14:42.14:799,42,0	0/0:15,0:15:45.15:0,45,689	1/1:1,10:11:30.10:580,30,0
chr10	98879438	.	A	AG	112.89	PASS	AB=0.711;AC=1;AF=0.018;AN=56;BaseQRankSum=5.363;DP=691;FS=2.446;HRun=1;HaplotypeScore=104.3899;InbreedingCoeff=-0.0184;MQ=57.53;MQ0=7;MQRankSum=-3.322;QD=4.18;ReadPosRankSum=1.864;VQSLOD=0.5876;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:63.01:0,63,524	0/0:8,0:8:21.07:0,21,272	0/0:20,0:15:32.07:0,32,390	0/0:31,0:14:36.45:0,36,426	0/0:22,0:22:66.18:0,66,815	0/0:15,0:15:45.15:0,45,583	0/0:25,0:25:75.20:0,75,918	0/0:22,0:17:46.16:0,46,423	0/0:14,0:14:42.12:0,42,531	0/0:36,0:36:99:0,108,1340	0/0:27,0:27:78.24:0,78,997	0/0:28,0:28:78.24:0,78,999	0/0:19,0:19:57.15:0,57,698	0/0:26,0:26:78.25:0,78,1011	0/0:34,0:34:99:0,102,1296	0/1:16,11:26:99:187,0,111	0/0:36,0:36:92.12:0,92,1128	0/0:16,0:17:40.02:0,40,295	0/0:17,0:16:45.15:0,45,581	0/0:29,0:29:82.14:0,82,1038	0/0:15,0:15:45.15:0,45,583	0/0:22,0:22:66.17:0,66,825	0/0:33,0:32:96.27:0,96,1203	0/0:39,0:40:99:0,119,1488	0/0:18,0:18:45.14:0,45,573	0/0:33,0:33:92.96:0,93,717	0/0:34,0:33:99:0,102,1323	0/0:15,0:13:35.39:0,35,225
chr10	98879440	.	A	AAAGG	5135.22	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.038;DP=698;FS=5.094;HRun=0;HaplotypeScore=128.0468;InbreedingCoeff=0.9974;MQ=57.53;MQ0=6;MQRankSum=-4.505;QD=36.16;ReadPosRankSum=-0.216;VQSLOD=4.7920;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,8:28:33.46:645,33,0	0/0:8,0:8:21.04:0,21,304	0/0:21,0:15:24.50:0,25,297	0/0:30,0:14:20.76:0,21,263	0/0:23,0:23:54.13:0,54,791	0/0:17,0:17:42.12:0,42,658	0/0:26,0:26:39.33:0,39,851	1/1:22,2:19:32.98:375,33,0	0/0:14,0:14:39.10:0,39,588	0/0:35,0:35:93.11:0,93,1358	0/0:28,0:28:66.15:0,66,947	0/0:27,0:27:78.15:0,78,1168	0/0:19,0:19:45.14:0,45,712	0/0:27,0:27:66.16:0,66,988	0/0:35,0:35:84.21:0,84,1266	1/1:19,0:28:65.80:1098,66,0	0/0:35,0:35:74.55:0,75,978	1/1:11,4:15:27.58:601,28,0	0/0:18,0:18:44.91:0,45,600	0/0:28,0:28:63.20:0,63,1018	0/0:15,0:15:45.12:0,45,687	0/0:22,0:22:57.16:0,57,869	0/0:33,0:32:75.18:0,75,1130	0/0:40,0:40:95.95:0,96,1373	0/0:18,0:18:36.11:0,36,563	1/1:17,14:31:28.75:1552,29,0	0/0:36,0:35:96.25:0,96,1480	1/1:4,11:13:36.12:863,36,0
chr10	98879479	.	AG	A	229.50	PASS	AB=0.797;AC=4;AF=0.071;AN=56;BaseQRankSum=7.158;DP=676;FS=2.599;HRun=1;HaplotypeScore=123.4046;InbreedingCoeff=0.4551;MQ=67.34;MQ0=1;MQRankSum=-5.230;QD=4.41;ReadPosRankSum=-2.145;VQSLOD=-0.3079;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,15:20:23.76:193,0,24	0/0:13,0:13:39.06:0,39,556	0/0:31,1:22:48.02:0,48,600	0/0:36,0:23:27.16:0,27,448	0/0:27,0:27:78.25:0,78,1197	0/0:21,0:21:63.20:0,63,953	0/0:17,0:17:51.17:0,51,780	0/1:23,0:23:35.05:35,0,176	0/0:12,0:12:36.12:0,36,561	0/0:30,0:30:90.30:0,90,1381	0/0:34,0:34:99:0,102,1540	0/0:21,0:21:60.20:0,60,938	0/0:16,0:16:48.15:0,48,723	0/0:27,0:27:81.28:0,81,1263	0/0:25,0:25:75.24:0,75,1138	0/0:22,0:22:55.20:0,55,355	0/0:34,0:34:95.28:0,95,1470	1/1:1,5:7:16.94:114,17,0	0/0:22,0:22:65.03:0,65,969	0/0:24,0:24:72.19:0,72,1037	0/0:24,0:24:66.21:0,66,999	0/0:28,0:28:81.26:0,81,1245	0/0:23,0:23:69.22:0,69,1057	0/0:33,0:33:83.36:0,83,1351	0/0:21,0:21:63.16:0,63,906	0/0:27,0:27:52.07:0,52,445	0/0:30,0:30:90.29:0,90,1370	0/0:24,0:24:66.12:0,66,391
chr10	98879482	.	AAG	A	230.58	PASS	AB=0.595;AC=3;AF=0.054;AN=56;BaseQRankSum=6.489;DP=674;FS=1.923;HRun=0;HaplotypeScore=141.6925;InbreedingCoeff=0.7576;MQ=68.63;MQ0=1;MQRankSum=-5.511;QD=7.95;ReadPosRankSum=-0.868;VQSLOD=2.9359;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,15:20:0.97:230,0,1	0/0:12,0:12:36.11:0,36,651	0/0:30,0:20:36.58:0,37,650	0/0:35,0:25:33.61:0,34,523	0/0:26,0:26:78.27:0,78,1478	0/0:21,0:21:60.19:0,60,1093	0/0:18,0:18:54.17:0,54,990	0/0:24,0:24:69.12:0,69,1103	0/0:12,0:12:36.09:0,36,618	0/0:31,0:31:87.29:0,87,1609	0/0:32,0:32:96.27:0,96,1693	0/0:24,0:24:72.19:0,72,1250	0/0:16,0:16:45.14:0,45,816	0/0:27,0:27:78.27:0,78,1466	0/0:24,0:24:72.25:0,72,1353	0/0:24,0:24:56.77:0,57,970	0/0:34,0:34:96.31:0,96,1750	1/1:2,5:7:6.39:96,6,0	0/0:22,0:22:66.14:0,66,1120	0/0:24,0:24:72.23:0,72,1316	0/0:23,0:23:63.21:0,63,1185	0/0:26,0:26:78.25:0,78,1448	0/0:23,0:23:69.22:0,69,1276	0/0:33,0:33:80.93:0,81,1633	0/0:19,0:19:54.18:0,54,1024	0/0:28,0:28:84.19:0,84,1486	0/0:31,0:31:90.29:0,90,1667	0/0:25,0:25:68.92:0,69,1304
chr10	98879496	.	GAAA	G	635.39	PASS	AB=0.805;AC=2;AF=0.036;AN=56;BaseQRankSum=7.097;DP=665;FS=3.866;HRun=6;HaplotypeScore=160.3134;InbreedingCoeff=-0.0346;MQ=65.35;MQ0=1;MQRankSum=-5.083;QD=11.35;ReadPosRankSum=1.065;VQSLOD=-0.2514;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:46.71:0,47,999	0/0:12,0:12:36.12:0,36,812	0/0:21,0:18:38.04:0,38,648	0/1:28,0:23:6.36:6,0,561	0/0:25,0:25:72.25:0,72,1620	0/0:21,0:21:63.22:0,63,1354	0/0:24,0:24:69.20:0,69,1480	0/0:21,0:21:60.17:0,60,1240	0/0:12,0:12:33.11:0,33,744	0/0:28,0:28:81.27:0,81,1766	0/0:28,0:28:84.29:0,84,1830	0/0:26,0:26:75.26:0,75,1644	0/0:19,0:19:57.20:0,57,1243	0/0:28,0:28:84.26:0,84,1776	0/0:28,0:28:84.29:0,84,1810	0/1:12,15:27:50.33:709,0,50	0/0:31,0:31:87.28:0,87,1913	0/0:5,0:5:12.04:0,12,264	0/0:18,0:18:51.13:0,51,1041	0/0:22,0:22:63.22:0,63,1420	0/0:24,0:24:66.18:0,66,1447	0/0:28,0:28:84.29:0,84,1842	0/0:23,0:23:69.24:0,69,1531	0/0:32,0:32:69.03:0,69,2007	0/0:18,0:18:51.17:0,51,1129	0/0:32,0:32:90.29:0,90,1867	0/0:31,0:31:90.29:0,90,1944	0/0:27,0:27:78.19:0,78,1608
chr10	98879507	.	GAT	G	508.45	PASS	AB=0.834;AC=6;AF=0.107;AN=56;BaseQRankSum=8.079;DP=677;FS=4.757;HRun=0;HaplotypeScore=148.8611;InbreedingCoeff=-0.1199;MQ=64.62;MQ0=1;MQRankSum=-7.301;QD=3.82;ReadPosRankSum=-1.903;VQSLOD=2.6209;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,4:21:78.86:79,0,680	0/0:12,0:12:36.12:0,36,730	0/0:15,0:14:35.13:0,35,553	0/0:26,0:22:33.16:0,33,734	0/0:26,0:26:78.27:0,78,1584	0/0:22,0:22:66.23:0,66,1326	0/0:25,0:25:75.24:0,75,1480	0/1:22,4:24:23.65:24,0,1224	0/0:14,0:14:42.11:0,42,740	0/0:33,0:33:99:0,99,1965	0/0:27,0:27:81.28:0,81,1646	0/0:30,0:30:80.05:0,80,1683	0/0:22,0:22:66.23:0,66,1328	0/0:28,0:28:84.29:0,84,1705	0/0:26,0:26:78.27:0,78,1582	0/1:15,11:26:99:325,0,676	0/0:32,0:32:96.18:0,96,1834	0/1:7,1:8:28.83:29,0,230	0/0:19,0:19:57.19:0,57,1093	0/0:22,0:22:66.23:0,66,1327	0/0:28,0:28:84.29:0,84,1671	0/0:30,0:30:90.30:0,90,1788	0/0:25,0:25:75.26:0,75,1518	0/0:31,1:32:49.85:0,50,1793	0/0:18,0:18:54.17:0,54,1050	0/1:24,5:29:99:131,0,1347	0/0:30,0:30:90.28:0,90,1754	0/1:17,4:21:46.73:47,0,849
chr10	98879519	.	AGGC	A	1272.17	PASS	AB=0.795;AC=6;AF=0.107;AN=56;BaseQRankSum=9.629;DP=694;FS=7.620;HRun=0;HaplotypeScore=159.0051;InbreedingCoeff=-0.1206;MQ=64.02;MQ0=0;MQRankSum=-7.044;QD=9.42;ReadPosRankSum=-2.011;VQSLOD=2.5118;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,6:20:99:244,0,301	0/0:13,0:13:39.13:0,39,895	0/0:25,0:18:32.10:0,32,825	0/0:26,0:20:30.25:0,30,757	0/0:29,0:29:87.30:0,87,1997	0/0:26,0:26:78.27:0,78,1813	0/0:20,0:20:60.20:0,60,1335	0/1:24,9:29:99:306,0,605	0/0:16,0:16:48.16:0,48,1130	0/0:34,0:34:99:0,102,2363	0/0:28,0:28:84.29:0,84,1990	0/0:30,0:30:90.31:0,90,2078	0/0:23,0:23:69.24:0,69,1614	0/0:28,0:28:84.24:0,84,1832	0/0:25,0:25:75.24:0,75,1689	0/1:12,11:23:99:399,0,433	0/0:29,0:29:15.53:0,16,1798	0/1:8,1:9:99:125,0,118	0/0:17,0:17:51.18:0,51,1165	0/0:24,0:24:72.23:0,72,1640	0/0:30,0:30:89.34:0,89,2035	0/0:30,0:30:90.29:0,90,1989	0/0:24,0:24:72.25:0,72,1626	0/0:31,0:31:80.95:0,81,1960	0/0:18,0:18:54.19:0,54,1234	0/1:22,6:28:99:208,0,926	0/0:32,0:32:96.30:0,96,2173	0/1:15,5:20:99:116,0,450
chr10	98879522	.	C	CAGGAAGAAAGAA	11947.61	PASS	AB=0.818;AC=11;AF=0.196;AN=56;BaseQRankSum=7.492;DP=703;FS=43.112;HRun=0;HaplotypeScore=255.1644;InbreedingCoeff=0.8776;MQ=63.74;MQ0=0;MQRankSum=-13.858;QD=87.85;ReadPosRankSum=-0.393;VQSLOD=3.1808;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,3:21:40.02:1492,40,0	0/0:13,0:13:36.12:0,36,1176	0/0:27,0:20:39.10:0,39,731	0/0:27,0:20:11.99:0,12,817	0/0:29,0:29:78.25:0,78,2487	0/0:28,0:28:81.26:0,81,2614	0/0:19,0:19:54.17:0,54,1661	1/1:34,0:30:66.22:1549,66,0	0/0:17,0:17:51.15:0,51,1468	0/0:35,0:35:90.29:0,90,2858	0/0:28,0:28:81.25:0,81,2644	0/0:32,0:32:87.17:0,87,2703	0/0:23,0:23:66.23:0,66,2250	0/0:25,0:25:69.22:0,69,2374	0/0:24,0:24:66.23:0,66,2196	1/1:23,0:23:57.13:2173,57,0	0/0:28,0:28:76.41:0,76,2248	1/1:9,0:9:15.89:449,16,0	0/0:17,0:17:48.15:0,48,1455	0/0:26,0:26:66.23:0,66,2267	0/0:32,0:32:54.12:0,54,2588	0/0:28,0:28:75.26:0,75,2594	0/0:25,0:25:63.22:0,63,2000	0/0:30,0:30:74.89:0,75,2386	0/0:19,0:19:51.18:0,51,1748	0/1:21,6:27:38.29:3071,0,38	0/0:33,0:33:84.27:0,84,2649	1/1:14,6:20:60.21:3213,60,0
chr10	98879527	.	AG	A	1084.09	PASS	AB=0.823;AC=7;AF=0.125;AN=56;BaseQRankSum=8.456;DP=709;FS=12.350;HRun=2;HaplotypeScore=134.3273;InbreedingCoeff=-0.1394;MQ=64.28;MQ0=0;MQRankSum=-7.752;QD=6.45;ReadPosRankSum=-2.123;VQSLOD=-0.7244;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,7:21:99:137,0,217	0/0:13,0:13:39.13:0,39,584	0/0:32,0:23:53.09:0,53,677	0/1:26,0:21:8.09:8,0,394	0/0:26,0:26:78.25:0,78,1148	0/0:28,0:28:84.28:0,84,1258	0/0:19,0:19:57.19:0,57,851	0/1:30,7:33:99:343,0,486	0/0:17,0:17:51.17:0,51,751	0/0:34,0:34:99:0,99,1463	0/0:32,0:32:93.27:0,93,1314	0/0:32,0:32:96.28:0,96,1376	0/0:22,0:22:66.22:0,66,987	0/0:23,0:23:69.22:0,69,1009	0/0:24,0:24:72.24:0,72,1076	0/1:17,8:25:99:218,0,222	0/0:27,0:27:78.14:0,78,1057	0/1:8,1:9:18.43:18,0,121	0/0:18,0:18:51.16:0,51,746	0/0:28,0:28:84.28:0,84,1254	0/0:32,0:32:90.21:0,90,1281	0/0:26,0:26:75.25:0,75,1123	0/0:23,0:23:69.20:0,69,981	0/0:30,0:30:87.25:0,87,1236	0/0:17,0:17:51.17:0,51,764	0/1:20,7:27:99:260,0,318	0/0:37,0:37:99:0,105,1493	0/1:12,9:21:99:228,0,203
chr10	98879535	.	A	AAG	1078.41	PASS	AB=0.848;AC=6;AF=0.107;AN=56;BaseQRankSum=8.657;DP=697;FS=3.065;HRun=0;HaplotypeScore=143.4348;InbreedingCoeff=-0.1200;MQ=63.29;MQ0=0;MQRankSum=-8.763;QD=7.59;ReadPosRankSum=-2.228;VQSLOD=2.8557;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,5:24:99:164,0,478	0/0:13,0:13:39.13:0,39,628	0/0:32,0:23:57.67:0,58,813	0/0:25,0:20:44.54:0,45,586	0/0:27,0:27:78.25:0,78,1231	0/0:30,0:30:87.28:0,87,1364	0/0:19,0:19:57.17:0,57,881	0/1:29,5:30:99:146,0,766	0/0:15,0:15:45.15:0,45,734	0/0:32,0:32:93.32:0,93,1516	0/0:31,0:31:90.31:0,90,1466	0/0:30,0:30:90.31:0,90,1467	0/0:23,0:23:69.24:0,69,1114	0/0:24,0:24:72.24:0,72,1150	0/0:22,0:22:66.21:0,66,1052	0/1:24,0:24:99:116,0,621	0/0:24,0:25:75.23:0,75,1189	0/1:8,1:11:30.73:31,0,279	0/0:20,0:20:60.20:0,60,976	0/0:27,0:27:81.28:0,81,1320	0/0:30,0:30:90.31:0,90,1468	0/0:23,0:23:69.24:0,69,1125	0/0:23,0:23:69.24:0,69,1120	0/0:29,0:30:84.74:0,85,1328	0/0:17,0:17:51.17:0,51,827	0/1:19,7:26:99:330,0,528	0/0:36,0:36:99:0,102,1652	0/1:12,9:21:99:417,0,314
chr10	98879578	.	A	AGAC	7469.28	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-6.895;DP=736;FS=2.638;HRun=0;HaplotypeScore=120.4276;InbreedingCoeff=0.9982;MQ=63.06;MQ0=5;MQRankSum=-4.615;QD=47.27;ReadPosRankSum=-0.282;VQSLOD=6.5764;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,38:40:69.21:1556,69,0	0/0:7,0:7:18.06:0,18,300	0/0:35,0:29:75.10:0,75,1148	0/0:31,0:26:53.05:0,53,923	0/0:24,0:24:72.25:0,72,1173	0/0:28,0:28:78.25:0,78,1265	0/0:13,0:13:33.11:0,33,532	1/1:3,32:35:93.32:1747,93,0	0/0:19,0:19:57.18:0,57,914	0/0:34,0:34:93.32:0,93,1529	0/0:22,0:22:66.23:0,66,1095	0/0:34,0:34:96.30:0,96,1531	0/0:30,0:30:87.30:0,87,1425	0/0:26,0:26:75.26:0,75,1224	0/0:32,0:32:93.30:0,93,1491	1/1:4,20:24:42.14:949,42,0	0/0:19,0:20:50.98:0,51,785	1/1:0,13:13:30.10:678,30,0	0/0:26,0:25:72.22:0,72,1117	0/0:28,0:28:72.23:0,72,1170	0/0:34,0:34:96.31:0,96,1566	0/0:20,0:20:60.20:0,60,964	0/0:30,0:30:87.26:0,87,1361	0/0:30,0:30:71.01:0,71,1184	0/0:17,0:17:48.16:0,48,792	1/1:3,25:29:87.25:1745,87,0	0/0:38,0:38:99:0,114,1852	1/1:5,11:16:39.13:794,39,0
chr10	98879784	.	T	TA	7046.94	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=0.953;DP=677;FS=1.087;HRun=0;HaplotypeScore=76.6645;InbreedingCoeff=0.9999;MQ=81.53;MQ0=0;MQRankSum=-4.451;QD=45.17;ReadPosRankSum=1.581;VQSLOD=5.0760;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,48:48:99:2155,135,0	0/0:11,0:11:30.08:0,30,401	0/0:21,0:21:57.11:0,57,737	0/0:18,0:18:48.13:0,48,649	0/0:20,0:20:60.19:0,60,821	0/0:22,0:22:63.21:0,63,881	0/0:18,0:18:54.16:0,54,737	1/1:1,27:28:81.25:1249,81,0	0/0:19,0:19:51.17:0,51,713	0/0:27,0:27:72.24:0,72,1007	0/0:21,0:21:63.21:0,63,880	0/0:17,0:17:48.15:0,48,654	0/0:29,0:29:81.27:0,81,1133	0/0:28,0:28:78.26:0,78,1090	0/0:31,0:31:93.30:0,93,1283	0/0:24,0:24:72.22:0,72,979	0/0:26,0:26:75.25:0,75,1047	1/1:1,19:20:57.19:911,57,0	0/0:15,0:15:45.06:0,45,600	0/0:24,0:24:72.23:0,72,989	0/0:40,0:40:99:0,114,1589	0/0:14,0:14:42.14:0,42,587	0/0:15,0:15:45.15:0,45,629	0/0:27,0:27:78.22:0,78,1067	0/0:20,0:20:57.19:0,57,797	1/1:0,30:30:90.31:1439,90,0	0/0:34,0:33:99:0,102,1424	1/1:0,30:30:81.28:1293,81,0
chr10	98880034	.	T	TA	1242.82	PASS	AB=0.907;AC=14;AF=0.250;AN=56;BaseQRankSum=5.735;DP=572;FS=2.147;HRun=14;HaplotypeScore=93.3299;InbreedingCoeff=0.5034;MQ=80.16;MQ0=3;MQRankSum=1.142;QD=5.73;ReadPosRankSum=-1.800;VQSLOD=2.4771;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,28:39:39.85:466,40,0	0/0:12,0:13:29.46:0,29,180	0/0:35,0:26:16.95:0,17,107	0/1:25,0:20:4.76:5,0,39	0/0:12,1:15:0.99:0,1,115	0/0:16,0:18:28.49:0,28,179	0/0:15,1:19:6.26:0,6,145	1/1:16,3:32:29.33:262,29,0	0/0:15,1:17:11.14:0,11,191	0/0:18,0:20:18.65:0,19,105	0/0:19,1:20:8.31:0,8,173	0/0:20,1:23:15.96:0,16,212	0/0:10,0:10:23.63:0,24,154	0/0:17,0:17:15.23:0,15,218	0/0:18,1:18:3.08:0,3,146	0/0:5,0:11:12.20:0,12,35	0/0:18,0:22:41.83:0,42,248	1/1:7,20:27:44.99:394,45,0	0/0:23,1:24:4.62:0,5,259	0/0:14,0:14:14.57:0,15,96	0/0:20,0:22:33.23:0,33,194	0/0:18,0:18:37.79:0,38,238	0/1:8,1:9:14.61:15,0,45	0/1:26,3:30:9.68:10,0,316	0/0:13,1:14:3.17:0,3,144	1/1:7,3:18:25.92:146,26,0	0/1:14,4:18:17.35:17,0,155	1/1:7,8:16:15.09:103,15,0
chr10	98880388	.	G	GC	2792.67	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-12.896;DP=652;FS=5.817;HRun=5;HaplotypeScore=62.4491;InbreedingCoeff=0.9947;MQ=84.10;MQ0=0;MQRankSum=-2.153;QD=32.47;ReadPosRankSum=1.171;VQSLOD=4.3124;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,41:47:99:1415,108,0	0/0:14,0:14:36.09:0,36,387	0/0:18,0:19:45.10:0,45,484	0/0:19,0:19:48.06:0,48,495	0/0:13,0:13:33.08:0,33,355	0/0:14,0:14:42.09:0,42,442	0/0:29,0:29:75.19:0,75,806	0/0:20,0:20:54.13:0,54,576	0/0:14,0:14:36.07:0,36,379	0/0:20,0:20:48.11:0,48,514	0/0:14,0:14:35.37:0,35,386	0/0:26,0:26:72.18:0,72,774	0/0:18,0:18:51.13:0,51,548	0/0:21,0:21:63.16:0,63,675	0/0:30,0:30:84.19:0,84,893	0/0:22,0:22:63.16:0,63,677	0/0:46,0:46:99:0,120,1281	1/1:1,38:39:99:1500,114,0	0/0:15,0:15:42.11:0,42,451	0/0:14,0:14:33.08:0,33,354	0/0:70,0:70:99:0,189,2009	0/0:22,0:22:57.14:0,57,612	0/0:8,0:8:18.03:0,18,187	0/0:37,0:37:99:0,99,1064	0/0:12,0:12:27.06:0,27,290	0/0:20,0:20:51.12:0,51,548	0/0:13,0:13:33.08:0,33,354	0/0:16,0:16:45.11:0,45,484
chr10	98880582	.	AT	A	3156.74	PASS	AB=0.946;AC=14;AF=0.250;AN=56;BaseQRankSum=16.495;DP=664;FS=9.951;HRun=11;HaplotypeScore=77.4877;InbreedingCoeff=0.8713;MQ=70.22;MQ0=1;MQRankSum=-1.861;QD=14.96;ReadPosRankSum=0.181;VQSLOD=3.4152;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,30:35:71.89:591,72,0	0/0:15,0:15:17.67:0,18,390	0/0:13,0:12:15.03:0,15,156	0/1:13,0:11:2.69:3,0,94	0/0:27,1:28:50.53:0,51,735	0/0:20,0:20:54.14:0,54,575	0/0:21,0:21:54.12:0,54,567	1/1:3,28:31:80.37:658,80,0	0/0:19,0:19:30.27:0,30,491	0/0:33,0:33:81.20:0,81,858	0/0:14,1:15:20.47:0,20,423	0/0:12,0:12:32.75:0,33,330	0/0:17,0:17:45.11:0,45,480	0/0:23,0:23:63.14:0,63,663	0/0:23,0:23:61.02:0,61,632	1/1:1,25:26:62.92:517,63,0	0/0:31,2:33:62.57:0,63,869	1/1:2,23:26:61.96:498,62,0	0/0:30,0:30:66.17:0,66,704	0/0:24,0:24:57.14:0,57,608	0/0:24,0:24:60.15:0,60,640	0/0:26,0:26:69.17:0,69,729	0/1:22,3:25:1.72:2,0,595	0/0:28,0:28:72.17:0,72,759	0/0:21,1:22:32.45:0,32,532	1/1:3,31:35:62.90:708,63,0	0/0:27,0:27:53.57:0,54,771	1/1:3,17:20:44.91:365,45,0
chr10	98880769	.	C	CTT	3142.17	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-5.196;DP=688;FS=0.000;HRun=10;HaplotypeScore=87.3541;InbreedingCoeff=0.9909;MQ=75.26;MQ0=0;MQRankSum=0.372;QD=23.80;ReadPosRankSum=-1.555;VQSLOD=3.0075;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,28:34:69.65:918,70,0	0/0:12,0:12:23.98:0,24,244	0/0:25,0:21:31.68:0,32,285	0/0:20,0:21:16.13:0,16,214	0/0:26,0:27:74.77:0,75,718	0/0:15,0:18:23.25:0,23,330	0/0:28,0:29:68.77:0,69,660	1/1:8,20:30:67.73:839,68,0	0/0:14,0:15:32.47:0,32,363	0/0:31,0:32:63.39:0,63,663	0/0:25,0:26:68.87:0,69,682	0/0:25,0:25:60.06:0,60,602	0/0:26,0:26:63.06:0,63,640	0/0:29,0:30:80.75:0,81,773	0/0:36,0:36:99:0,102,1008	0/0:21,0:22:50.80:0,51,492	0/0:29,0:30:62.80:0,63,686	1/1:3,28:31:26.67:775,27,0	0/0:16,0:16:32.78:0,33,316	0/0:25,0:25:65.84:0,66,653	0/0:25,0:26:65.80:0,66,638	0/0:12,0:13:26.75:0,27,254	0/0:22,0:22:60.09:0,60,603	0/0:20,0:21:57.05:0,57,560	0/0:15,0:17:26.51:0,27,378	1/1:5,18:24:58.47:597,58,0	0/0:39,0:39:96.55:0,97,964	1/1:0,10:13:14.54:188,15,0
chr10	98881296	.	CACGTCCGGCG	C	8033.22	PASS	AB=0.520;AC=9;AF=0.161;AN=56;BaseQRankSum=12.651;DP=702;FS=27.758;HRun=0;HaplotypeScore=212.5154;InbreedingCoeff=0.8179;MQ=78.47;MQ0=1;MQRankSum=-12.974;QD=89.26;ReadPosRankSum=-0.962;VQSLOD=2.8323;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:66.23:2254,66,0	0/0:11,0:11:33.11:0,33,1711	0/0:23,0:23:69.23:0,69,3160	0/0:27,0:26:75.22:0,75,2944	0/0:23,0:23:69.22:0,69,3464	0/0:15,0:15:45.15:0,45,2397	0/0:30,0:30:90.29:0,90,4568	1/1:0,25:25:75.26:2576,75,0	0/0:36,0:36:99:0,108,5640	0/0:26,0:26:78.27:0,78,3665	0/0:15,0:15:45.15:0,45,2218	0/0:29,0:29:84.29:0,84,4473	0/0:15,0:15:45.15:0,45,2253	0/0:29,0:29:87.30:0,87,4636	0/0:32,0:32:96.33:0,96,5146	0/0:23,0:23:69.22:0,69,3055	0/0:30,0:30:90.31:0,90,4504	0/1:1,12:13:99:1015,0,132	0/0:27,0:27:78.25:0,78,3756	0/0:23,0:23:69.24:0,69,3621	0/0:62,0:62:99:0,187,9335	0/0:30,0:30:90.31:0,90,4689	0/0:20,0:20:60.19:0,60,3115	0/0:41,0:41:99:0,123,6285	0/0:15,0:15:45.15:0,45,2323	1/1:0,21:21:63.22:2085,63,0	0/0:30,0:30:87.28:0,87,4319	1/1:0,3:3:3.01:105,3,0
chr10	98881816	.	T	TTGCC	2302.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.096;DP=714;FS=23.537;HRun=0;HaplotypeScore=109.1432;InbreedingCoeff=0.9880;MQ=84.56;MQ0=0;MQRankSum=-3.308;QD=67.71;ReadPosRankSum=1.729;VQSLOD=3.2957;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,141,2599	0/0:8,0:8:18.06:0,18,336	0/0:16,0:16:45.01:0,45,708	0/0:29,0:29:75.21:0,75,1262	0/0:24,0:24:69.24:0,69,1264	0/0:18,0:18:54.16:0,54,942	0/0:33,0:33:99:0,99,1810	0/0:42,0:42:99:0,108,1898	0/0:21,0:21:63.20:0,63,1145	0/0:28,0:28:78.26:0,78,1419	0/0:20,0:20:54.17:0,54,977	0/0:28,0:28:81.28:0,81,1491	0/0:23,0:23:69.24:0,69,1272	0/0:32,0:32:87.28:0,87,1578	0/0:28,0:28:69.23:0,69,1260	1/1:0,34:33:90.31:2397,90,0	0/0:24,0:24:69.24:0,69,1286	0/0:23,0:23:60.21:0,60,1110	0/0:22,0:22:63.20:0,63,1124	0/0:18,0:18:48.16:0,48,894	0/0:40,0:40:99:0,99,1836	0/0:22,0:22:60.19:0,60,1083	0/0:14,0:14:36.10:0,36,610	0/0:29,0:29:84.22:0,84,1430	0/0:28,0:28:75.26:0,75,1400	0/0:29,0:29:81.26:0,81,1462	0/0:20,0:20:54.17:0,54,971	0/0:11,0:11:21.07:0,21,392
chr10	98882398	.	C	CA	4468.25	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=-5.738;DP=469;FS=23.877;HRun=0;HaplotypeScore=48.0431;InbreedingCoeff=0.9833;MQ=50.67;MQ0=15;MQRankSum=-6.545;QD=39.54;ReadPosRankSum=-2.010;VQSLOD=2.5480;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:48.35:1301,48,0	0/0:6,0:6:18.06:0,18,251	./.	./.	0/0:24,0:23:48.16:0,48,663	0/0:12,0:10:27.07:0,27,359	0/0:19,0:18:45.15:0,45,629	1/1:4,27:29:84.24:1296,84,0	0/0:16,0:15:42.14:0,42,587	0/0:23,0:21:60.20:0,60,839	0/0:9,0:9:12.01:0,12,168	0/0:17,0:16:45.14:0,45,614	0/0:13,0:13:39.13:0,39,545	0/0:12,0:9:24.08:0,24,331	0/0:8,0:6:18.06:0,18,251	0/0:11,0:11:30.10:0,30,420	0/0:22,0:19:51.17:0,51,713	1/1:3,16:18:45.15:719,45,0	0/0:19,0:17:45.15:0,45,621	0/0:19,0:19:54.18:0,54,755	0/0:22,0:22:48.14:0,48,653	0/0:19,0:19:51.17:0,51,713	0/0:15,0:15:33.11:0,33,456	0/0:31,0:27:75.25:0,75,1049	0/0:13,0:13:30.10:0,30,419	1/1:1,19:20:15.22:816,15,0	0/0:25,0:25:51.16:0,51,697	1/1:0,9:9:21.07:336,21,0
chr10	98883150	.	A	AAAAAAG	3818.49	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=2.345;DP=572;FS=36.980;HRun=0;HaplotypeScore=183.0529;InbreedingCoeff=0.7248;MQ=60.26;MQ0=17;MQRankSum=-8.105;QD=21.70;ReadPosRankSum=-2.152;VQSLOD=1.2136;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,2:30:68.37:989,68,0	0/0:8,0:8:10.75:0,11,122	0/0:35,0:17:7.45:0,7,156	0/1:14,0:9:6.54:7,0,69	0/0:25,0:25:42.81:0,43,527	0/0:23,0:23:37.71:0,38,457	0/0:16,0:15:28.04:0,28,304	1/1:48,1:49:99:1329,101,0	0/0:17,0:15:9.39:0,9,209	0/0:12,0:12:11.43:0,11,107	0/0:18,0:18:4.42:0,4,169	0/0:15,0:15:11.52:0,12,148	0/0:18,0:15:23.27:0,23,216	0/0:14,0:14:26.51:0,27,304	0/1:13,0:13:16.41:16,0,110	0/0:19,0:19:28.18:0,28,327	0/0:29,0:27:19.50:0,20,335	1/1:8,1:9:23.94:345,24,0	0/0:22,0:21:12.71:0,13,258	0/0:23,0:22:44.09:0,44,387	0/0:11,0:11:18:0,18,201	0/0:12,0:11:17.23:0,17,203	0/0:17,0:17:26.10:0,26,269	0/0:13,0:12:11.94:0,12,123	0/0:29,0:29:50.45:0,50,565	1/1:31,1:33:34.56:764,35,0	0/0:20,0:20:43.21:0,43,425	1/1:22,0:19:32.16:368,32,0
chr10	98883205	.	A	ATTT	3897.35	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-2.619;DP=471;FS=7.121;HRun=7;HaplotypeScore=70.0374;InbreedingCoeff=0.9871;MQ=71.36;MQ0=1;MQRankSum=-3.572;QD=45.32;ReadPosRankSum=-2.061;VQSLOD=2.9752;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:6,7:13:29.96:459,30,0	0/0:10,0:10:27.08:0,27,368	0/0:11,0:11:15:0,15,173	0/0:7,0:6:11.93:0,12,138	0/0:22,0:22:62.55:0,63,809	0/0:21,0:21:54.14:0,54,721	0/0:10,0:10:21.07:0,21,287	1/1:6,7:14:33.05:509,33,0	0/0:19,0:19:57.18:0,57,762	0/0:16,0:16:42.08:0,42,513	0/0:23,0:23:66.20:0,66,885	0/0:12,0:12:33.10:0,33,450	0/0:21,0:21:63.19:0,63,842	0/0:11,0:11:27.07:0,27,368	0/0:17,0:17:36.07:0,36,475	0/0:16,0:16:45.15:0,45,614	0/0:24,0:24:63.19:0,63,860	1/1:0,19:19:48.16:996,48,0	0/0:19,0:19:48.14:0,48,638	0/0:17,0:18:40.57:0,41,570	0/0:13,0:13:36.09:0,36,472	0/0:16,0:16:45.15:0,45,614	0/0:16,0:16:42.12:0,42,573	0/0:15,0:15:42.11:0,42,555	0/0:20,0:20:57.17:0,57,762	1/1:7,18:25:28.27:1209,28,0	0/0:28,0:28:75.21:0,75,1006	1/1:4,11:15:39.06:725,39,0
chr10	98883292	.	TG	T	4529.76	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.210;DP=577;FS=9.553;HRun=1;HaplotypeScore=67.9574;InbreedingCoeff=0.9920;MQ=92.11;MQ0=0;MQRankSum=-2.418;QD=39.39;ReadPosRankSum=0.620;VQSLOD=5.0108;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:57.19:797,57,0	0/0:11,0:11:33.11:0,33,528	0/0:21,0:21:60.20:0,60,907	0/0:29,0:29:81.13:0,81,1202	0/0:26,0:26:78.27:0,78,1244	0/0:24,0:24:63.20:0,63,983	0/0:19,0:19:57.18:0,57,885	1/1:0,37:37:99:1553,111,0	0/0:22,0:21:63.21:0,63,1002	0/0:25,0:25:75.26:0,75,1199	0/0:16,0:16:48.16:0,48,767	0/0:21,0:21:60.19:0,60,935	0/0:23,0:23:66.19:0,66,1006	0/0:18,0:18:54.18:0,54,860	0/0:28,0:28:84.29:0,84,1341	0/0:16,0:16:48.16:0,48,767	0/0:22,0:22:66.20:0,66,1030	1/1:0,22:22:60.20:839,60,0	0/0:25,0:25:72.23:0,72,1126	0/0:14,0:14:40.69:0,41,628	0/0:17,0:17:51.17:0,51,813	0/0:7,0:7:21.07:0,21,333	0/0:19,0:19:57.19:0,57,910	0/0:23,0:23:69.24:0,69,1103	0/0:12,0:12:36.12:0,36,576	1/1:1,20:21:12.22:748,12,0	0/0:24,0:24:69.20:0,69,1054	1/1:2,13:15:45.12:593,45,0
chr10	98883541	.	C	CTT	1906.97	PASS	AB=0.851;AC=11;AF=0.196;AN=56;BaseQRankSum=0.825;DP=457;FS=14.087;HRun=10;HaplotypeScore=57.2830;InbreedingCoeff=0.6824;MQ=65.67;MQ0=2;MQRankSum=0.431;QD=14.13;ReadPosRankSum=-1.691;VQSLOD=0.0968;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:7,1:37:15.78:194,0,16	0/0:15,0:15:39.05:0,39,396	0/1:12,0:9:19.78:20,0,99	0/1:6,0:6:4.68:5,0,20	0/0:27,0:27:72.14:0,72,725	0/0:19,0:19:54.10:0,54,542	0/0:14,0:14:33.05:0,33,336	1/1:7,18:26:54.13:743,54,0	0/0:12,0:12:36.08:0,36,366	0/0:19,0:19:54.12:0,54,549	0/0:17,0:17:42.08:0,42,427	0/0:20,0:20:48.06:0,48,488	0/0:9,0:9:21.04:0,21,213	0/0:16,0:16:45.04:0,45,448	0/0:13,0:14:20.74:0,21,266	0/0:2,0:12:21.95:0,22,95	0/0:22,0:22:63.14:0,63,641	1/1:5,0:21:41.96:147,42,0	0/0:12,0:12:20.99:0,21,214	0/0:10,0:10:30.07:0,30,304	0/0:12,0:13:32.79:0,33,317	0/0:6,0:6:15.03:0,15,153	0/0:12,0:12:36.08:0,36,366	0/0:6,0:8:23.53:0,24,207	0/0:22,0:22:60.13:0,60,610	1/1:3,13:18:42.11:602,42,0	0/0:23,0:22:63.10:0,63,633	1/1:6,8:13:26.58:367,27,0
chr10	98884308	.	TCC	T	1581.75	PASS	AB=0.769;AC=10;AF=0.179;AN=56;BaseQRankSum=2.383;DP=326;FS=7.096;HRun=11;HaplotypeScore=45.4699;InbreedingCoeff=0.6684;MQ=74.45;MQ0=0;MQRankSum=0.563;QD=14.92;ReadPosRankSum=4.490;VQSLOD=1.0652;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,20:27:42.07:447,42,0	0/0:3,0:3:6.02:0,6,92	0/0:10,0:9:14.30:0,14,193	0/1:11,1:11:1.92:2,0,142	0/0:5,0:5:5.51:0,6,54	0/0:8,0:8:14.51:0,15,152	0/0:23,0:23:42.05:0,42,506	1/1:12,4:17:11.99:128,12,0	0/0:5,0:5:9.02:0,9,118	0/0:6,0:6:6.01:0,6,72	0/0:8,0:8:11.84:0,12,143	0/0:8,0:9:14.52:0,15,155	0/0:6,0:6:6.02:0,6,92	0/0:7,0:7:14.61:0,15,230	0/0:8,0:8:11.99:0,12,158	0/0:4,0:15:25.45:0,25,102	0/0:21,0:22:56.04:0,56,615	1/1:5,20:25:57.12:606,57,0	0/0:19,0:21:26.04:0,26,283	0/0:7,0:8:17.55:0,18,238	0/0:15,0:15:32.53:0,33,365	0/0:6,0:7:17.54:0,18,219	0/0:4,0:4:9.03:0,9,138	0/0:17,0:18:38.54:0,39,477	0/0:6,0:6:11.52:0,12,128	1/1:2,15:17:42.07:447,42,0	0/0:6,0:6:9.02:0,9,118	0/1:3,5:8:5.96:113,0,6
chr10	98884497	.	AAC	A	199.24	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=3.428;DP=400;FS=13.521;HRun=0;HaplotypeScore=51.4490;InbreedingCoeff=0.5386;MQ=68.03;MQ0=24;MQRankSum=-0.923;QD=9.06;ReadPosRankSum=0.874;VQSLOD=1.3587;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,4:6:3.01:39,3,0	0/0:5,0:5:15.05:0,15,233	0/0:38,0:8:7.35:0,7,120	0/0:42,0:11:7.02:0,7,73	0/0:9,0:9:21.07:0,21,320	0/0:21,0:21:51.16:0,51,764	0/0:14,0:14:33.56:0,34,487	0/0:32,0:32:63.21:0,63,999	0/0:10,0:10:23.57:0,24,351	0/0:9,0:9:24.08:0,24,399	0/0:7,0:7:15.05:0,15,235	0/0:8,0:8:15.05:0,15,225	0/0:6,0:6:18.03:0,18,239	0/0:9,0:9:15.49:0,15,237	0/0:6,0:5:12.02:0,12,169	0/0:10,0:10:24.42:0,24,269	0/0:21,0:20:45.15:0,45,650	0/1:16,0:16:2.75:252,0,3	0/0:19,0:19:36.12:0,36,574	0/0:11,0:11:33.11:0,33,515	0/0:15,0:15:42.14:0,42,653	0/0:10,0:10:24.05:0,24,329	0/0:13,0:13:36.05:0,36,546	0/0:8,0:8:18.52:0,19,265	0/0:12,0:11:30.10:0,30,476	0/0:13,0:13:36.11:0,36,571	0/0:11,0:11:33.09:0,33,454	0/0:19,0:19:54.18:0,54,789
chr10	98884507	.	CGTGT	C	174.57	PASS	AB=0.906;AC=10;AF=0.217;AN=46;BaseQRankSum=4.074;DP=413;FS=4.373;HRun=0;HaplotypeScore=66.0929;InbreedingCoeff=0.3953;MQ=63.65;MQ0=27;MQRankSum=-1.353;QD=2.10;ReadPosRankSum=-1.339;VQSLOD=1.2632;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:5:9.02:0,9,147	./.	./.	0/0:11,0:11:2.99:0,3,24	0/0:17,0:17:15.05:0,15,309	0/0:20,0:20:11.61:0,12,142	./.	0/0:12,0:12:21.75:0,22,352	0/0:9,0:9:3.01:0,3,68	0/0:7,0:7:18.02:0,18,282	0/1:10,3:12:39.94:40,0,64	0/0:8,0:8:17.89:0,18,258	0/0:11,0:11:2.95:0,3,65	0/0:6,0:5:8.91:0,9,110	1/1:6,0:10:12.01:112,12,0	1/1:15,5:19:3.01:46,3,0	1/1:9,1:10:2.99:46,3,0	0/0:21,0:20:8.92:0,9,129	0/0:14,0:14:21.03:0,21,346	0/0:20,0:19:13.19:0,13,251	0/0:10,0:9:11.85:0,12,101	0/0:12,0:12:11.83:0,12,223	0/0:11,0:11:17.59:0,18,281	0/0:11,0:10:3.01:0,3,43	./.	0/1:11,0:11:15.70:16,0,117	1/1:18,1:19:3.01:46,3,0
chr10	98884766	.	AT	A	1848.45	PASS	AB=0.835;AC=14;AF=0.250;AN=56;BaseQRankSum=8.346;DP=449;FS=10.316;HRun=11;HaplotypeScore=52.1062;InbreedingCoeff=0.6860;MQ=76.55;MQ0=0;MQRankSum=0.073;QD=11.77;ReadPosRankSum=3.396;VQSLOD=2.0779;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:65.92:542,66,0	0/0:9,0:9:24.06:0,24,255	0/1:14,1:14:3.10:3,0,20	0/1:13,1:14:18.67:19,0,86	0/1:17,2:19:1.17:1,0,388	0/0:15,0:15:36.09:0,36,384	0/0:19,2:21:20.32:0,20,395	1/1:9,15:24:15.87:331,16,0	0/0:13,0:13:21.03:0,21,215	0/0:18,0:18:54.14:0,54,575	0/0:12,0:12:30.07:0,30,314	0/0:14,0:14:33.06:0,33,338	0/0:12,0:12:33.08:0,33,346	0/0:15,1:16:17.41:0,17,378	0/0:13,0:13:30.02:0,30,307	1/1:2,14:16:35.96:296,36,0	0/0:27,0:26:63.13:0,63,656	1/1:0,15:15:41.95:345,42,0	0/0:19,0:19:54.11:0,54,565	0/0:12,0:12:36.09:0,36,380	0/0:15,0:15:39:0,39,371	0/0:14,0:14:42.05:0,42,421	0/0:21,0:22:60.02:0,60,622	0/0:13,0:13:24.05:0,24,248	0/0:6,0:6:14.99:0,15,141	1/1:3,15:19:18:343,18,0	0/0:20,0:21:59.95:0,60,610	0/1:2,7:9:8.01:148,0,8
chr10	98885326	.	GCA	G	2862.86	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.050;DP=829;FS=9.683;HRun=0;HaplotypeScore=115.4752;InbreedingCoeff=0.9458;MQ=59.24;MQ0=16;MQRankSum=2.552;QD=21.85;ReadPosRankSum=-2.086;VQSLOD=3.5384;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,20:37:65.87:674,66,0	0/0:18,0:18:51.16:0,51,811	0/0:44,0:28:50.72:0,51,691	0/0:52,1:35:37.35:0,37,950	0/0:34,0:34:84.26:0,84,1362	0/0:33,0:33:90.25:0,90,1382	0/0:24,1:25:13.30:0,13,743	1/1:17,22:38:77.99:939,78,0	0/0:25,0:25:69.21:0,69,1095	0/0:9,0:9:27.08:0,27,426	0/0:16,1:17:4.31:0,4,610	0/0:32,0:32:90.31:0,90,1482	0/0:25,0:25:72.20:0,72,1117	0/0:33,0:33:87.28:0,87,1403	0/0:39,1:40:70.54:0,71,1641	0/0:35,0:35:70.08:0,70,1022	0/0:26,0:26:60.17:0,60,941	1/1:8,12:20:17.13:431,17,0	0/0:11,0:10:24.08:0,24,390	0/0:31,0:31:87.29:0,87,1425	0/0:66,0:66:99:0,175,2754	0/0:25,0:25:60.17:0,60,931	0/0:22,0:22:60.12:0,60,909	0/0:44,0:44:96.31:0,96,1585	0/0:19,0:19:48.15:0,48,772	1/1:9,20:27:72.21:881,72,0	0/0:30,0:30:84.29:0,84,1385	1/1:1,3:3:9.03:109,9,0
chr10	98885345	.	TACACACATACAC	T	1694.09	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.458;DP=926;FS=10.405;HRun=0;HaplotypeScore=298.6292;InbreedingCoeff=0.9839;MQ=52.88;MQ0=30;MQRankSum=-5.715;QD=56.47;ReadPosRankSum=-1.797;VQSLOD=1.7624;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:50.73:0,51,2631	0/0:19,0:19:51.18:0,51,2591	0/0:58,0:26:56.86:0,57,1416	0/0:65,0:26:38.95:0,39,988	0/0:30,0:30:78.27:0,78,4097	0/0:32,0:32:75.26:0,75,4110	0/0:24,0:24:54.17:0,54,2619	0/0:41,0:40:73.13:0,73,2710	0/0:34,0:34:78.27:0,78,3405	0/0:14,0:13:33.09:0,33,1714	0/0:20,0:20:54.18:0,54,2363	0/0:40,0:39:99:0,105,4943	0/0:31,0:31:87.30:0,87,4507	0/0:33,0:33:87.28:0,87,3836	0/0:40,0:40:99:0,111,5541	1/1:10,20:30:87.09:1789,87,0	0/0:30,0:30:78.27:0,78,3604	0/0:24,0:23:63.20:0,63,3103	0/0:25,0:15:33.11:0,33,1142	0/0:35,0:35:75.49:0,75,3945	0/0:82,0:82:99:0,214,10413	0/0:22,0:22:54.19:0,54,2813	0/0:25,0:25:63.69:0,64,3026	0/0:41,0:41:99:0,108,5269	0/0:24,0:24:63.20:0,63,2947	0/0:34,0:31:84.29:0,84,4051	0/0:31,0:31:84.27:0,84,4334	0/0:6,0:5:15.05:0,15,751
chr10	98885405	.	A	AAC	5572.76	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-3.590;DP=1060;FS=4.994;HRun=0;HaplotypeScore=157.0888;InbreedingCoeff=0.9859;MQ=59.20;MQ0=15;MQRankSum=0.790;QD=31.66;ReadPosRankSum=-0.299;VQSLOD=5.9426;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,18:29:31.95:512,32,0	0/0:16,0:16:45.15:0,45,599	0/0:74,0:39:87.66:0,88,1074	0/0:100,0:41:83.45:0,83,1030	0/0:35,0:35:96.29:0,96,1244	0/0:26,0:26:66.20:0,66,863	0/0:26,0:26:65.57:0,66,832	1/1:9,33:41:99:1653,102,0	0/0:37,0:37:99:0,102,1354	0/0:27,0:26:72.23:0,72,946	0/0:26,0:26:72.22:0,72,943	0/0:35,0:35:93.25:0,93,1190	0/0:32,0:32:81.24:0,81,1060	0/0:36,0:36:96.29:0,96,1235	0/0:43,0:43:99:0,114,1504	1/1:8,30:38:8.22:740,8,0	0/0:32,0:32:58.04:0,58,975	1/1:11,13:24:51.13:839,51,0	0/0:20,0:19:42.14:0,42,559	0/0:31,0:31:81.23:0,81,1035	0/0:113,0:113:99:0,250,3566	0/0:34,0:34:93.30:0,93,1223	0/0:27,0:27:75.23:0,75,983	0/0:50,0:50:99:0,132,1687	0/0:28,0:28:75.25:0,75,998	1/1:8,21:29:72.18:1192,72,0	0/0:35,0:35:90.29:0,90,1196	1/1:1,12:14:39.13:638,39,0
chr10	98885433	.	T	TACAC	4217.34	PASS	AB=0.926;AC=10;AF=0.179;AN=56;BaseQRankSum=3.538;DP=994;FS=5.204;HRun=0;HaplotypeScore=188.6791;InbreedingCoeff=0.7674;MQ=58.17;MQ0=14;MQRankSum=-10.094;QD=22.20;ReadPosRankSum=-5.330;VQSLOD=3.3368;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:17,12:30:27.60:533,28,0	0/0:14,0:14:33.08:0,33,522	0/1:57,0:33:10.24:10,0,464	0/0:85,0:42:37.26:0,37,628	0/0:31,0:32:71.19:0,71,1004	0/0:23,0:24:60.13:0,60,891	0/0:28,0:30:72.18:0,72,1076	1/1:27,14:39:83.93:1461,84,0	0/0:38,0:38:78.25:0,78,1278	0/0:31,0:31:75.21:0,75,1118	0/0:24,0:25:45.14:0,45,716	0/0:34,0:34:75.07:0,75,1202	0/0:25,0:25:57.16:0,57,899	0/0:41,0:42:93.26:0,93,1452	0/0:37,0:38:84.25:0,84,1329	0/0:37,0:37:75.10:0,75,1119	0/0:29,0:29:70.73:0,71,1076	0/1:17,2:20:17.39:435,0,17	0/0:27,0:22:39.06:0,39,543	0/0:28,0:28:68.64:0,69,1077	0/0:93,0:96:99:0,210,3139	0/0:31,0:33:53.26:0,53,1100	0/0:24,0:26:66.02:0,66,931	0/0:48,0:49:99:0,123,1891	0/0:23,0:24:54.15:0,54,831	1/1:13,14:28:59.87:1212,60,0	0/0:34,0:36:80.76:0,81,1177	1/1:6,7:13:27.06:566,27,0
chr10	98885506	.	C	CAG	8200.60	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-10.408;DP=834;FS=14.577;HRun=0;HaplotypeScore=97.5867;InbreedingCoeff=0.9995;MQ=87.71;MQ0=2;MQRankSum=-5.582;QD=46.86;ReadPosRankSum=1.354;VQSLOD=4.7509;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:38:80.34:1561,80,0	0/0:8,0:8:24.08:0,24,352	0/0:31,0:31:87.26:0,87,1200	0/0:32,0:32:62.28:0,62,875	0/0:16,0:16:45.15:0,45,659	0/0:25,0:25:72.24:0,72,1055	0/0:29,0:29:84.27:0,84,1203	1/1:1,28:30:90.25:1562,90,0	0/0:28,0:28:66.22:0,66,969	0/0:33,0:33:96.22:0,96,1336	0/0:21,0:21:60.14:0,60,803	0/0:44,0:44:99:0,126,1738	0/0:36,0:36:99:0,108,1469	0/0:45,0:45:99:0,132,1900	0/0:31,0:31:87.26:0,87,1237	1/1:2,44:45:99:2238,120,0	0/0:36,0:36:99:0,102,1434	1/1:3,17:20:45.15:830,45,0	0/0:20,0:20:57.18:0,57,817	0/0:30,0:30:90.23:0,90,1226	0/0:44,0:44:99:0,117,1701	0/0:32,0:32:84.25:0,84,1194	0/0:25,0:25:72.21:0,72,1017	0/0:36,0:36:99:0,105,1458	0/0:21,0:21:63.21:0,63,925	1/1:2,26:28:81.21:1448,81,0	0/0:36,0:36:99:0,102,1418	1/1:0,11:12:30.10:561,30,0
chr10	98886517	.	C	CAGT	10745.48	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-12.845;DP=618;FS=4.653;HRun=0;HaplotypeScore=85.1282;InbreedingCoeff=0.9909;MQ=74.76;MQ0=1;MQRankSum=-2.701;QD=63.58;ReadPosRankSum=1.451;VQSLOD=6.7188;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,44:47:99:2588,105,0	0/0:7,0:7:21.07:0,21,391	0/0:16,0:17:10.76:0,11,441	0/0:15,0:14:35.49:0,35,485	0/0:17,0:17:51.17:0,51,949	0/0:26,0:26:78.27:0,78,1454	0/0:22,0:22:66.21:0,66,1199	1/1:3,16:19:54.18:1307,54,0	0/0:17,0:17:51.16:0,51,921	0/0:22,0:22:63.22:0,63,1174	0/0:20,0:20:60.21:0,60,1117	0/0:19,0:19:54.19:0,54,1006	0/0:22,0:22:66.23:0,66,1229	0/0:23,0:23:69.24:0,69,1287	0/0:22,0:22:66.21:0,66,1199	1/1:1,30:30:87.30:2129,87,0	0/0:29,0:29:87.30:0,87,1611	1/1:2,22:25:63.22:1553,63,0	0/0:20,0:20:60.21:0,60,1100	0/0:14,0:14:39.13:0,39,726	0/0:31,0:31:93.32:0,93,1729	0/0:20,0:20:60.21:0,60,1119	0/0:20,0:20:57.18:0,57,1027	0/0:26,0:26:78.27:0,78,1452	0/0:21,0:21:63.19:0,63,1077	1/1:2,28:31:34.34:1990,34,0	0/0:19,0:19:57.20:0,57,1063	1/1:0,16:16:48.16:1179,48,0
chr10	98887178	.	AAAAAAC	A	344.30	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=8.556;DP=481;FS=8.837;HRun=0;HaplotypeScore=110.1641;InbreedingCoeff=0.7158;MQ=55.68;MQ0=12;MQRankSum=-1.879;QD=6.15;ReadPosRankSum=3.097;VQSLOD=1.2686;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:27:20.92:66,0,21	0/0:8,0:8:24.07:0,24,619	0/0:17,0:5:11.73:0,12,87	0/0:21,0:5:6.02:0,6,134	0/0:21,0:21:23.53:0,24,1326	0/0:17,0:17:39.10:0,39,1016	0/0:19,0:19:57.20:0,57,1699	0/0:22,0:22:23.19:0,23,161	0/0:11,0:11:27.07:0,27,713	0/0:17,0:16:42.09:0,42,1090	0/0:14,0:14:36.08:0,36,932	0/0:17,0:17:48.14:0,48,1413	0/0:14,0:14:36.12:0,36,1071	0/0:10,0:10:27.07:0,27,709	0/0:12,0:12:33.10:0,33,893	1/1:4,5:9:15.05:310,15,0	0/0:31,0:31:87.25:0,87,2555	1/1:18,0:18:20.63:94,21,0	0/0:28,0:26:66.19:0,66,1719	0/0:17,0:17:48.08:0,48,1068	0/0:17,0:13:39.11:0,39,1124	0/0:7,0:7:18.04:0,18,522	0/0:10,0:10:26.91:0,27,686	0/0:37,0:35:96.23:0,96,2709	0/0:14,0:13:24.07:0,24,667	0/0:17,0:16:18.83:0,19,166	0/0:17,0:17:45.07:0,45,1099	0/0:10,0:10:17.47:0,17,92
chr10	98887180	.	AAAAC	A	2081.94	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.798;DP=487;FS=4.526;HRun=0;HaplotypeScore=87.5019;InbreedingCoeff=0.9575;MQ=55.69;MQ0=14;MQRankSum=-6.507;QD=20.21;ReadPosRankSum=0.499;VQSLOD=2.9381;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,21:26:49.96:918,50,0	0/0:8,0:8:24.06:0,24,483	0/0:18,0:5:10.57:0,11,96	0/0:22,0:5:6.02:0,6,105	0/0:23,0:23:53.97:0,54,1059	0/0:19,0:19:48.10:0,48,891	0/0:20,0:20:60.19:0,60,1345	1/1:19,1:20:12.01:115,12,0	0/0:11,0:11:27.09:0,27,560	0/0:16,0:15:42.10:0,42,850	0/0:13,0:12:35.93:0,36,707	0/0:17,0:17:48.16:0,48,1086	0/0:14,0:14:36.11:0,36,830	0/0:10,0:10:27.09:0,27,583	0/0:12,0:12:33.10:0,33,715	1/1:8,0:8:15.04:174,15,0	0/0:32,0:32:90.26:0,90,2001	1/1:8,11:19:47.80:611,48,0	0/0:28,0:26:66.13:0,66,1408	0/0:17,0:17:48.04:0,48,841	0/0:17,0:14:42.12:0,42,892	0/0:7,0:7:18.04:0,18,402	0/0:11,0:11:29.92:0,30,602	0/0:37,0:35:96.25:0,96,2104	0/0:15,0:14:27.05:0,27,523	1/1:15,3:17:37.07:329,37,0	0/0:17,0:17:51.09:0,51,888	1/1:10,0:10:21.22:120,21,0
chr10	98887181	.	AAAC	A	2602.82	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.318;DP=495;FS=4.128;HRun=0;HaplotypeScore=79.5979;InbreedingCoeff=0.9655;MQ=55.77;MQ0=14;MQRankSum=-6.468;QD=24.10;ReadPosRankSum=-0.333;VQSLOD=3.0800;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:27:53.71:839,54,0	0/0:8,0:8:24.06:0,24,415	0/0:18,0:5:11.15:0,11,87	0/0:22,0:5:6.02:0,6,82	0/0:22,0:22:55:0,55,901	0/0:19,0:19:48.04:0,48,762	0/0:20,0:20:60.19:0,60,1116	1/1:13,9:22:43.18:407,43,0	0/0:12,0:12:30.07:0,30,503	0/0:15,0:14:42.10:0,42,717	0/0:14,0:13:38.92:0,39,632	0/0:17,0:17:48.16:0,48,920	0/0:14,0:14:36.04:0,36,676	0/0:10,0:10:27.09:0,27,507	0/0:11,0:11:33:0,33,576	1/1:9,0:9:15.50:148,15,0	0/0:33,0:33:93.24:0,93,1723	1/1:19,0:19:47.82:530,48,0	0/0:28,0:26:66.11:0,66,1213	0/0:17,0:17:48:0,48,731	0/0:18,0:15:45.05:0,45,761	0/0:7,0:7:18.03:0,18,343	0/0:11,0:11:29.92:0,30,520	0/0:38,0:36:99:0,99,1797	0/0:16,0:15:30.04:0,30,476	1/1:14,5:18:53.87:575,54,0	0/0:17,0:17:51.02:0,51,737	1/1:4,6:10:21.91:291,22,0
chr10	98887182	.	AAC	A	2097.07	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.627;DP=494;FS=3.360;HRun=0;HaplotypeScore=72.6649;InbreedingCoeff=0.9616;MQ=55.91;MQ0=14;MQRankSum=-7.498;QD=19.78;ReadPosRankSum=-0.265;VQSLOD=3.4315;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,1:27:66.21:579,66,0	0/0:9,0:9:27.06:0,27,370	0/0:18,0:5:8.93:0,9,71	0/0:22,0:5:6.01:0,6,56	0/0:21,0:21:55.79:0,56,725	0/0:19,0:19:47.98:0,48,625	0/0:21,0:21:63.17:0,63,908	1/1:18,4:22:44.96:435,45,0	0/0:12,0:12:30.03:0,30,418	0/0:15,0:14:42.10:0,42,598	0/0:14,0:13:38.92:0,39,529	0/0:18,0:18:51.16:0,51,781	0/0:13,0:13:36.05:0,36,541	0/0:12,0:12:33.09:0,33,477	0/0:11,0:11:32.09:0,32,453	1/1:9,0:9:15.43:120,15,0	0/0:33,0:33:93.23:0,93,1417	1/1:17,1:18:47.82:394,48,0	0/0:27,0:25:66.09:0,66,982	0/0:17,0:17:47.99:0,48,628	0/0:18,0:15:45.05:0,45,624	0/0:7,0:7:18.02:0,18,285	0/0:11,0:11:29.90:0,30,422	0/0:38,0:36:99:0,102,1483	0/0:15,0:14:30.06:0,30,405	1/1:17,2:18:53.94:523,54,0	0/0:17,0:17:50.25:0,50,591	1/1:8,1:9:22.84:232,23,0
chr10	98887191	.	C	CA	2269.88	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=10.732;DP=505;FS=0.987;HRun=6;HaplotypeScore=66.7896;InbreedingCoeff=0.9779;MQ=55.88;MQ0=12;MQRankSum=-4.635;QD=22.04;ReadPosRankSum=-0.806;VQSLOD=2.6825;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,18:28:51.67:675,52,0	0/0:9,0:9:24.05:0,24,245	./.	0/0:21,0:7:11.60:0,12,82	0/0:20,0:20:44.97:0,45,459	0/0:17,0:17:48.09:0,48,482	0/0:22,0:22:66.14:0,66,669	1/1:11,12:23:41.38:428,41,0	0/0:11,0:11:27.06:0,27,275	0/0:15,0:14:42.09:0,42,422	0/0:12,0:11:30.07:0,30,306	0/0:16,0:16:45.10:0,45,459	0/0:17,0:17:48.11:0,48,489	0/0:16,0:16:38.82:0,39,378	0/0:15,0:15:45.09:0,45,452	0/0:3,0:8:10.46:0,10,37	0/0:38,0:38:99:0,102,1039	1/1:3,14:17:44.59:485,45,0	0/0:29,0:27:74.49:0,74,756	0/0:14,0:14:30.07:0,30,306	0/0:17,0:15:42.10:0,42,428	0/0:8,0:8:18.03:0,18,183	0/0:10,0:10:27.03:0,27,267	0/0:37,0:37:99:0,102,1016	0/0:14,0:13:30.03:0,30,295	1/1:11,11:21:56.46:603,56,0	0/0:14,0:14:42.10:0,42,428	1/1:4,8:12:20.82:252,21,0
chr10	98887395	.	T	TTG	355.11	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=1.484;DP=426;FS=0.000;HRun=0;HaplotypeScore=64.7727;InbreedingCoeff=0.1529;MQ=70.43;MQ0=0;MQRankSum=-0.122;QD=4.28;ReadPosRankSum=-0.851;VQSLOD=1.9397;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:1.36:0,1,217	0/0:8,0:8:21.05:0,21,252	0/1:7,0:6:14.97:15,0,50	0/1:12,0:11:6.02:6,0,42	0/0:9,0:9:17.89:0,18,155	0/0:16,0:16:38.90:0,39,416	0/0:26,0:26:57.09:0,57,660	0/1:26,0:26:63.39:73,0,63	0/0:18,0:18:54.05:0,54,627	0/0:14,0:14:26.55:0,27,239	0/0:6,0:6:14.77:0,15,130	0/0:18,0:18:54.14:0,54,646	0/0:17,0:17:45.02:0,45,515	0/0:23,0:23:53.89:0,54,592	0/0:16,0:16:33.05:0,33,385	1/1:0,9:9:18.06:299,18,0	0/0:26,0:26:69.19:0,69,854	0/1:18,0:18:64.99:65,0,94	0/0:20,0:20:32.14:0,32,303	0/0:6,0:6:17.96:0,18,177	0/0:23,0:23:59.80:0,60,650	0/0:7,0:7:14.97:0,15,143	0/0:6,0:6:8.91:0,9,78	0/0:25,0:25:69.17:0,69,827	0/0:9,0:9:21.03:0,21,247	0/1:11,0:11:28.13:28,0,85	0/0:11,0:11:25.86:0,26,279	0/0:8,0:8:16.96:0,17,81
chr10	98888202	.	TGAG	T	171.47	PASS	AB=1.000;AC=7;AF=0.135;AN=52;BaseQRankSum=2.942;DP=141;FS=3.132;HRun=0;HaplotypeScore=30.8499;InbreedingCoeff=0.4578;MQ=109.60;MQ0=1;MQRankSum=-3.504;QD=11.43;ReadPosRankSum=0.890;VQSLOD=2.6995;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,5:7:12:176,12,0	./.	0/0:19,0:17:15.83:0,16,377	0/0:15,0:13:23.69:0,24,370	0/0:4,0:4:12.03:0,12,230	0/0:4,0:4:12.01:0,12,176	0/0:9,0:9:24.05:0,24,460	0/0:12,0:12:30.09:0,30,604	0/0:3,0:3:5.96:0,6,45	0/0:6,0:6:18.04:0,18,269	0/0:3,0:3:6:0,6,51	0/0:8,0:8:15.03:0,15,253	0/0:2,0:2:6.01:0,6,73	0/0:2,0:2:6.02:0,6,137	0/0:5,0:4:15.04:0,15,277	1/1:0,1:1:3.01:52,3,0	0/0:6,0:6:18.04:0,18,364	1/1:0,1:1:3.01:53,3,0	0/1:6,0:6:9.83:10,0,217	0/0:3,0:3:6.91:0,7,139	0/0:4,0:4:12:0,12,212	0/0:5,0:5:15.05:0,15,280	./.	0/0:2,0:2:6.02:0,6,132	0/0:6,0:6:18.04:0,18,325	0/0:2,0:2:3.01:0,3,67	0/0:3,0:3:6.02:0,6,118	0/0:3,0:3:9.03:0,9,205
chr10	98888835	.	C	CT	373.91	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=3.066;DP=337;FS=18.351;HRun=1;HaplotypeScore=49.3072;InbreedingCoeff=0.8316;MQ=87.23;MQ0=2;MQRankSum=-1.946;QD=10.68;ReadPosRankSum=-1.253;VQSLOD=-0.1930;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,1:7:11.74:80,12,0	0/0:4,0:4:8.99:0,9,75	0/0:31,0:23:0.25:0,0,300	0/0:17,0:15:22.45:0,22,242	0/0:12,0:12:32.62:0,33,326	0/0:18,0:18:45.06:0,45,481	0/0:18,0:18:47.64:0,48,535	1/1:3,15:18:35.77:306,36,0	0/0:7,0:7:20.92:0,21,233	0/0:9,0:9:23.99:0,24,229	0/0:6,0:6:9.02:0,9,102	0/0:15,0:15:33.97:0,34,446	0/0:9,0:9:26.93:0,27,302	0/0:16,0:16:42.06:0,42,460	0/0:10,0:10:26.96:0,27,281	1/1:2,0:2:4.98:24,5,0	0/0:21,0:21:60.06:0,60,625	1/1:3,0:3:5.98:54,6,0	0/0:19,0:19:56.93:0,57,566	0/0:6,0:6:15:0,15,138	0/0:21,0:21:54.05:0,54,559	0/0:9,0:9:24.01:0,24,280	0/0:15,0:15:36.04:0,36,377	0/0:12,0:12:36.09:0,36,428	0/0:12,0:12:29.87:0,30,324	1/1:4,1:5:8.90:64,9,0	0/0:15,0:15:35.99:0,36,378	./.
chr10	98888971	.	GCAC	G	4101.93	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.527;DP=555;FS=21.243;HRun=0;HaplotypeScore=79.3167;InbreedingCoeff=0.9872;MQ=73.28;MQ0=0;MQRankSum=-3.544;QD=34.76;ReadPosRankSum=2.003;VQSLOD=2.4645;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:32:66.22:986,66,0	0/0:12,0:12:33.08:0,33,649	0/0:14,0:14:33.11:0,33,624	0/0:25,0:25:44.94:0,45,807	0/0:19,0:19:54.19:0,54,1104	0/0:9,0:9:27.09:0,27,560	0/0:26,0:26:57.20:0,57,1169	1/1:4,19:23:57.17:811,57,0	0/0:12,0:12:30.10:0,30,629	0/0:20,0:20:51.18:0,51,1059	0/0:15,0:15:45.15:0,45,934	0/0:21,0:21:51.17:0,51,1031	0/0:19,0:19:48.16:0,48,1004	0/0:21,0:21:60.21:0,60,1226	0/0:23,0:23:57.20:0,57,1193	1/1:1,4:5:9.03:134,9,0	0/0:22,0:22:57.20:0,57,1188	1/1:4,31:35:84.28:1255,84,0	0/0:19,0:19:45.15:0,45,881	0/0:17,0:17:42.14:0,42,871	0/0:42,0:42:99:0,111,2232	0/0:12,0:12:36.12:0,36,749	0/0:19,0:19:45.15:0,45,923	0/0:36,0:36:90.31:0,90,1869	0/0:16,0:16:48.16:0,48,983	1/1:1,13:14:39.10:556,39,0	0/0:18,0:18:36.12:0,36,751	1/1:0,9:9:24.08:359,24,0
chr10	98890268	.	AC	A	2809.41	PASS	AB=0.524;AC=11;AF=0.196;AN=56;BaseQRankSum=8.542;DP=582;FS=11.950;HRun=7;HaplotypeScore=63.1734;InbreedingCoeff=0.8200;MQ=74.97;MQ0=0;MQRankSum=-0.886;QD=21.95;ReadPosRankSum=-0.497;VQSLOD=2.2237;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:66.15:671,66,0	0/0:3,0:3:6.02:0,6,76	0/0:19,0:18:30.19:0,30,462	0/0:26,1:23:9.08:0,9,423	0/0:20,0:20:51.16:0,51,640	0/0:23,0:23:66.19:0,66,815	0/0:28,0:28:75.22:0,75,924	1/1:4,22:26:66.12:661,66,0	0/0:24,0:24:69.21:0,69,850	0/0:22,0:22:54.17:0,54,677	0/0:10,0:10:27.09:0,27,339	0/0:36,0:36:99:0,105,1292	0/0:24,0:24:66.18:0,66,803	0/0:27,0:27:78.25:0,78,980	0/0:18,0:18:54.16:0,54,667	1/1:1,25:26:66.15:673,66,0	0/0:36,2:38:47.11:0,47,1197	0/1:2,20:22:19.89:435,0,20	0/0:12,0:12:33.11:0,33,414	0/0:12,0:12:33.11:0,33,415	0/0:38,0:38:99:0,111,1305	0/0:15,0:15:33.09:0,33,401	0/0:8,0:8:21.04:0,21,240	0/0:17,0:17:45.14:0,45,565	0/0:16,0:16:45.13:0,45,543	1/1:7,12:19:4.34:357,4,0	0/0:17,0:17:51.16:0,51,641	1/1:2,6:8:18.04:183,18,0
chr10	98892573	.	C	CT	5179.62	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-13.316;DP=707;FS=8.342;HRun=5;HaplotypeScore=67.4075;InbreedingCoeff=0.9991;MQ=84.55;MQ0=0;MQRankSum=-2.038;QD=32.99;ReadPosRankSum=-0.804;VQSLOD=4.8861;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:67.95:1232,68,0	0/0:12,0:12:36.08:0,36,379	0/0:26,0:26:57.12:0,57,608	0/0:17,0:17:47.46:0,47,464	0/0:34,0:34:93.23:0,93,999	0/0:21,0:21:60.15:0,60,645	0/0:30,0:30:85.46:0,85,906	1/1:5,25:30:72.22:932,72,0	0/0:22,0:22:57.12:0,57,604	0/0:22,0:22:66.16:0,66,703	0/0:22,0:22:57.14:0,57,613	0/0:28,0:28:84.20:0,84,895	0/0:33,0:33:96.24:0,96,1032	0/0:21,0:21:63.16:0,63,677	0/0:37,0:37:99:0,102,1088	1/1:1,24:25:66.21:869,66,0	0/0:23,0:23:63.13:0,63,666	1/1:2,26:28:75.24:987,75,0	0/0:17,0:17:45.11:0,45,484	0/0:25,0:25:72.18:0,72,774	0/0:22,0:22:48.11:0,48,516	0/0:17,0:17:45.11:0,45,484	0/0:31,0:31:93.23:0,93,999	0/0:32,0:32:87.22:0,87,935	0/0:35,0:35:99:0,102,1081	1/1:4,24:28:42.95:884,43,0	0/0:23,0:23:63.16:0,63,677	1/1:3,8:11:21.07:276,21,0
chr10	98895523	.	CGT	C	190.75	PASS	AB=0.931;AC=18;AF=0.346;AN=52;BaseQRankSum=3.629;DP=663;FS=3.950;HRun=0;HaplotypeScore=82.0488;InbreedingCoeff=-0.1417;MQ=69.88;MQ0=16;MQRankSum=-0.084;QD=0.56;ReadPosRankSum=2.528;VQSLOD=1.4029;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:34:24.02:0,24,254	0/0:7,0:6:6.02:0,6,89	./.	./.	0/0:14,0:14:6.02:0,6,89	0/0:15,0:17:18.04:0,18,218	0/1:14,2:16:11.57:12,0,226	1/1:25,0:24:2.22:7,2,0	0/1:18,2:20:8.53:9,0,283	0/0:24,0:23:12.46:0,12,122	0/0:10,0:9:6:0,6,69	0/1:22,3:25:30.19:30,0,370	0/1:24,4:28:43.80:44,0,112	0/1:16,1:16:17.68:18,0,129	0/1:22,0:21:2.41:2,0,343	0/0:17,0:32:9.48:0,9,96	0/1:28,5:33:99:102,0,524	0/0:22,0:33:6.63:0,7,181	0/1:14,1:13:17.58:18,0,158	0/1:16,0:16:9.31:9,0,157	0/1:55,1:57:1.75:2,0,417	0/0:13,4:17:3.01:0,3,45	0/0:19,0:20:11.96:0,12,158	0/0:39,2:42:19.16:0,19,937	0/1:16,0:16:17.27:17,0,164	1/1:17,0:22:6.15:29,6,0	0/1:17,1:19:23.59:24,0,194	1/1:8,0:9:2.84:14,3,0
chr10	98896389	.	C	CAT	1660.57	PASS	AB=0.794;AC=10;AF=0.179;AN=56;BaseQRankSum=-0.571;DP=706;FS=6.881;HRun=0;HaplotypeScore=102.3822;InbreedingCoeff=0.7608;MQ=56.45;MQ0=20;MQRankSum=-2.127;QD=9.88;ReadPosRankSum=0.042;VQSLOD=2.9141;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:12,27:38:12.55:252,0,13	0/0:10,0:10:23.78:0,24,196	0/0:26,0:12:29.66:0,30,256	0/0:32,0:12:23.95:0,24,208	0/0:14,0:14:38.96:0,39,369	0/0:28,0:28:59.90:0,60,579	0/0:44,0:43:99:0,108,1041	1/1:35,0:34:79.88:705,80,0	0/0:31,0:31:71.68:0,72,715	0/0:20,0:18:50.80:0,51,495	0/0:16,0:16:32.60:0,33,309	0/0:37,0:37:83.60:0,84,841	0/0:31,0:31:86.48:0,86,773	0/0:15,0:21:44.91:0,45,410	0/0:25,0:25:62.99:0,63,654	1/1:30,0:30:36.41:229,36,0	0/0:39,0:39:99:0,102,1047	0/1:19,0:19:33.75:97,0,34	0/0:17,0:16:24.79:0,25,264	0/0:15,0:15:36.01:0,36,380	0/0:37,0:37:71.92:0,72,753	0/0:19,0:19:47.37:0,47,379	0/0:9,0:9:18.41:0,18,183	0/0:32,0:32:85.04:0,85,806	0/0:18,0:18:38.99:0,39,361	1/1:27,0:25:29.17:341,29,0	0/0:16,0:16:41.96:0,42,393	1/1:17,0:16:31.73:206,32,0
chr10	98896391	.	TAC	T	999.69	PASS	AB=0.943;AC=23;AF=0.442;AN=52;BaseQRankSum=6.855;DP=701;FS=6.783;HRun=0;HaplotypeScore=95.5908;InbreedingCoeff=-0.1657;MQ=55.21;MQ0=20;MQRankSum=-1.549;QD=2.25;ReadPosRankSum=0.055;VQSLOD=1.0670;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:38:30.07:0,30,357	0/1:10,0:10:31.69:32,0,134	./.	./.	0/1:13,1:14:25.69:26,0,144	0/1:24,4:28:21.45:21,0,493	0/1:43,0:43:3.70:4,0,483	1/1:35,1:35:3.12:84,3,0	0/1:25,3:28:72.91:73,0,450	0/0:18,1:18:15.84:0,16,346	0/1:14,3:17:15.02:15,0,182	0/0:38,1:39:15.04:0,15,605	0/1:29,1:29:51.86:52,0,299	0/1:21,0:21:10.66:11,0,212	0/1:21,0:25:14:14,0,324	1/1:10,0:29:22.73:112,23,0	0/1:34,3:38:20.31:20,0,659	0/1:19,0:19:6.81:7,0,162	0/0:16,0:15:6.49:0,6,91	0/0:15,0:15:21.06:0,21,290	0/0:38,0:38:13.85:0,14,521	0/1:18,0:18:15.66:16,0,140	0/1:10,0:10:7.04:7,0,163	0/0:33,0:32:53.63:0,54,693	0/1:15,2:17:77.16:77,0,118	1/1:10,17:25:48.14:468,48,0	0/1:15,1:16:12.45:12,0,168	1/1:9,7:16:11.86:113,12,0
chr10	98897242	.	AG	A	340.80	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=0.663;DP=211;FS=3.492;HRun=12;HaplotypeScore=29.7161;InbreedingCoeff=0.6464;MQ=85.57;MQ0=0;MQRankSum=-1.639;QD=10.99;ReadPosRankSum=2.143;VQSLOD=2.1096;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:11.84:118,12,0	0/0:2,0:2:3.01:0,3,37	0/0:20,0:8:16.62:0,17,147	0/0:19,0:14:20.76:0,21,227	0/0:6,0:6:14.63:0,15,156	0/0:9,0:9:20.98:0,21,260	0/0:14,0:14:12.62:0,13,288	0/0:14,0:13:26.18:0,26,299	0/0:15,0:15:35.24:0,35,383	0/0:6,0:6:9.03:0,9,113	0/0:5,0:5:9.03:0,9,109	0/0:6,0:6:18.06:0,18,217	0/0:7,0:7:11.59:0,12,117	0/0:4,0:4:9.48:0,9,98	0/0:5,0:4:12:0,12,132	1/1:11,4:15:35.51:324,36,0	0/0:7,0:7:15:0,15,163	1/1:6,0:6:2.99:23,3,0	0/0:7,0:7:18.04:0,18,203	0/0:4,0:4:9.03:0,9,113	0/0:3,0:3:6.02:0,6,75	./.	0/0:3,0:3:9.03:0,9,106	0/0:4,0:4:9.03:0,9,110	./.	0/0:6,0:6:15.25:0,15,163	0/0:10,0:10:20.87:0,21,210	0/0:1,0:1:2.96:0,3,19
chr10	98898208	.	CGT	C	2419.27	PASS	AB=0.538;AC=5;AF=0.089;AN=56;BaseQRankSum=9.471;DP=734;FS=2.337;HRun=0;HaplotypeScore=86.1383;InbreedingCoeff=0.7780;MQ=82.09;MQ0=1;MQRankSum=0.345;QD=38.40;ReadPosRankSum=-0.823;VQSLOD=5.4887;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.31:0,96,1818	0/0:7,0:7:21.04:0,21,370	0/0:19,0:19:54.11:0,54,905	0/0:21,0:21:57.07:0,57,945	0/0:36,0:36:99:0,105,1907	0/0:27,0:27:81.26:0,81,1505	0/0:33,0:33:96.33:0,96,1854	1/1:0,32:32:96.30:1427,96,0	0/0:32,0:32:93.30:0,93,1761	0/0:25,0:25:72.24:0,72,1360	0/0:18,0:18:45.15:0,45,869	0/0:30,0:30:87.30:0,87,1666	0/0:37,0:37:99:0,105,1977	0/0:27,0:27:81.28:0,81,1543	0/0:41,0:41:99:0,123,2317	0/0:37,0:37:99:0,111,2143	0/0:28,0:28:78.27:0,78,1467	0/0:22,0:22:66.23:0,66,1257	0/0:21,0:21:60.19:0,60,1124	0/0:23,0:23:63.22:0,63,1216	0/0:30,0:30:84.29:0,84,1622	0/0:15,0:15:45.15:0,45,869	0/0:23,0:23:69.22:0,69,1276	0/0:28,0:28:78.27:0,78,1506	0/0:20,0:20:57.20:0,57,1101	0/1:3,18:21:99:754,0,111	0/0:37,0:37:99:0,108,2084	1/1:1,9:8:24.08:367,24,0
chr10	98898444	.	GA	G	928.56	PASS	AB=0.739;AC=6;AF=0.107;AN=56;BaseQRankSum=4.523;DP=612;FS=4.528;HRun=12;HaplotypeScore=71.5743;InbreedingCoeff=0.4921;MQ=75.65;MQ0=0;MQRankSum=-1.570;QD=9.48;ReadPosRankSum=4.731;VQSLOD=3.0089;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,19:31:47.10:383,0,47	0/0:6,0:6:15.03:0,15,152	0/0:14,1:13:16.68:0,17,169	0/0:15,1:16:3.71:0,4,186	0/1:25,4:30:8.98:9,0,611	0/0:23,0:23:45.54:0,46,446	0/0:22,0:25:62.59:0,63,575	0/0:11,0:25:36.05:0,36,194	0/0:18,0:18:48.08:0,48,478	0/0:28,0:28:63.05:0,63,619	0/0:18,0:18:51.09:0,51,508	0/0:25,1:27:42.71:0,43,592	0/0:20,0:20:54.11:0,54,546	0/0:19,0:21:44.92:0,45,440	0/0:21,2:24:27.68:0,28,432	1/1:3,20:23:1.88:380,2,0	0/0:32,1:33:66.91:0,67,843	1/1:2,12:14:35.86:279,36,0	0/0:18,2:21:13.60:0,14,464	0/0:24,1:25:30.75:0,31,470	0/0:15,1:20:44.42:0,44,387	0/0:19,0:19:45.07:0,45,442	0/0:15,0:17:44.74:0,45,412	0/0:17,0:17:48.09:0,48,481	0/0:16,0:17:38.89:0,39,366	0/0:9,0:28:54.10:0,54,327	0/0:25,1:26:36.89:0,37,528	0/0:5,0:24:51.58:0,52,285
chr10	98901206	.	CATAT	C	1026.51	PASS	AB=1.000;AC=5;AF=0.096;AN=52;BaseQRankSum=5.913;DP=352;FS=6.882;HRun=0;HaplotypeScore=59.1655;InbreedingCoeff=0.5973;MQ=78.96;MQ0=0;MQRankSum=1.155;QD=23.87;ReadPosRankSum=2.849;VQSLOD=2.2473;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,18:24:48.16:818,48,0	0/0:5,0:8:23.45:0,23,414	./.	0/1:8,0:8:8.98:26,0,9	0/0:8,0:9:20.86:0,21,464	0/0:11,0:11:30.10:0,30,744	0/0:12,0:12:24.07:0,24,544	0/0:40,0:42:95.90:0,96,2155	0/0:6,0:6:12.04:0,12,301	0/0:21,0:21:48.14:0,48,1042	0/0:13,0:13:30.09:0,30,693	0/0:9,0:9:18.05:0,18,387	0/0:11,0:11:30.08:0,30,651	0/0:3,0:3:6.02:0,6,150	0/0:4,0:4:5.81:0,6,88	0/0:2,0:10:16.99:0,17,90	0/0:21,1:24:5.82:0,6,1236	1/1:4,7:11:18.06:307,18,0	0/0:18,0:21:44.52:0,45,940	0/0:12,0:12:27.02:0,27,586	0/0:3,0:4:8.82:0,9,163	./.	0/0:2,0:2:6.01:0,6,75	0/0:3,0:3:3.01:0,3,75	0/0:15,0:17:32.68:0,33,653	0/0:14,0:14:30.09:0,30,670	0/0:18,0:18:39.09:0,39,903	0/0:20,0:24:56.98:0,57,1333
chr10	98901883	.	C	CT	849	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-6.248;DP=700;FS=5.156;HRun=10;HaplotypeScore=74.2266;InbreedingCoeff=0.7260;MQ=67.47;MQ0=0;MQRankSum=1.837;QD=16.02;ReadPosRankSum=-0.109;VQSLOD=4.0050;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,22:28:54.14:576,54,0	0/1:7,0:7:0.54:1,0,127	0/0:17,0:16:0.06:0,0,177	0/0:4,0:4:5.99:0,6,49	0/0:42,0:42:77.76:0,78,788	0/0:22,0:22:62.93:0,63,517	0/0:22,0:23:61.96:0,62,498	0/0:35,1:36:80.81:0,81,654	0/0:25,0:26:76.90:0,77,611	0/0:34,0:34:89.88:0,90,738	0/0:18,0:18:41.92:0,42,342	0/0:34,0:34:89.83:0,90,729	0/0:20,0:21:49.96:0,50,400	0/0:29,0:29:74.90:0,75,616	0/0:30,0:31:82.09:0,82,661	0/0:5,0:37:64.08:0,64,187	0/0:24,0:24:65.91:0,66,541	1/1:4,14:18:17.46:391,17,0	0/0:17,1:18:11.76:0,12,291	0/0:27,0:27:71.91:0,72,591	0/0:22,0:22:44.90:0,45,366	0/0:20,0:20:44.92:0,45,369	0/0:22,0:22:44.92:0,45,369	0/0:21,0:21:53.90:0,54,443	0/0:26,0:26:47.92:0,48,394	0/0:40,0:40:99:0,105,860	0/0:29,0:29:74.84:0,75,608	0/0:24,0:24:65.89:0,66,538
chr10	98901922	.	T	TA	1057.16	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=0.437;DP=691;FS=1.404;HRun=7;HaplotypeScore=70.6245;InbreedingCoeff=0.9006;MQ=61.08;MQ0=0;MQRankSum=-1.041;QD=23.49;ReadPosRankSum=-0.468;VQSLOD=3.6178;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.09:0,54,521	0/0:9,0:9:27.03:0,27,256	1/1:3,0:3:2.88:16,3,0	./.	0/0:40,0:40:99:0,114,1101	0/0:28,0:28:75.10:0,75,719	0/0:21,0:21:54.07:0,54,515	0/0:39,0:39:90.08:0,90,854	0/0:27,0:27:75.11:0,75,724	0/0:36,0:36:93.13:0,93,893	0/0:19,0:19:54.04:0,54,511	0/0:33,0:33:96.14:0,96,920	0/0:19,0:19:50.99:0,51,474	0/0:33,0:33:84.11:0,84,806	0/0:32,0:32:87.12:0,87,834	1/1:9,33:42:96.28:1148,96,0	0/0:29,0:29:84.13:0,84,811	0/0:18,0:18:45.07:0,45,434	0/0:20,0:20:33.30:0,33,494	0/0:33,0:33:78.11:0,78,753	0/0:26,0:26:75.12:0,75,724	0/0:23,0:23:63.10:0,63,608	0/0:20,0:20:60.10:0,60,579	0/0:19,0:19:54.06:0,54,510	0/0:17,0:17:48.06:0,48,457	0/0:35,0:35:90.14:0,90,869	0/0:29,0:29:87.13:0,87,835	0/0:21,0:21:63.10:0,63,608
chr10	98902081	.	T	TA	248.21	PASS	AB=0.750;AC=2;AF=0.036;AN=56;BaseQRankSum=5.902;DP=670;FS=2.501;HRun=3;HaplotypeScore=86.5103;InbreedingCoeff=-0.0371;MQ=81.77;MQ0=0;MQRankSum=5.839;QD=6.71;ReadPosRankSum=-3.977;VQSLOD=-0.6716;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1476	0/0:10,0:10:30.09:0,30,360	0/1:11,6:20:99:231,0,218	0/1:13,4:17:99:106,0,212	0/0:22,0:22:60.17:0,60,702	0/0:24,0:24:69.19:0,69,816	0/0:28,0:28:75.23:0,75,900	0/0:38,0:38:99:0,99,1141	0/0:25,0:25:72.22:0,72,864	0/0:24,0:24:69.20:0,69,819	0/0:21,0:21:57.16:0,57,672	0/0:30,0:30:87.27:0,87,1044	0/0:27,0:27:78.24:0,78,935	0/0:16,0:16:48.14:0,48,566	0/0:29,0:29:87.25:0,87,1032	0/0:27,0:27:81.25:0,81,971	0/0:33,0:33:93.26:0,93,1093	0/0:23,0:23:66.18:0,66,777	0/0:20,0:20:54.16:0,54,647	0/0:29,0:29:78.21:0,78,913	0/0:26,0:25:72.22:0,72,863	0/0:20,0:20:57.13:0,57,648	0/0:13,0:13:33.08:0,33,383	0/0:28,0:28:84.24:0,84,995	0/0:19,0:19:57.17:0,57,675	0/0:34,0:34:99:0,99,1167	0/0:18,0:18:54.15:0,54,636	0/0:8,0:8:24.07:0,24,288
chr10	98902952	.	AGT	A	1020	PASS	AB=0.908;AC=26;AF=0.464;AN=56;BaseQRankSum=8.078;DP=731;FS=5.645;HRun=0;HaplotypeScore=105.8539;InbreedingCoeff=-0.0710;MQ=58.29;MQ0=13;MQRankSum=-1.159;QD=2.00;ReadPosRankSum=0.503;VQSLOD=1.8328;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:46:28.40:140,28,0	0/1:16,1:18:34.26:34,0,412	1/1:24,0:11:1.55:4,2,0	0/0:36,0:23:0:0,0,0	0/0:27,0:29:36.09:0,36,484	0/1:15,1:16:11.06:11,0,257	0/1:25,2:28:39.61:40,0,306	1/1:18,4:19:9.99:89,10,0	0/1:19,4:24:50.99:51,0,289	0/0:26,0:26:21.07:0,21,317	0/0:25,1:26:3.74:0,4,445	0/1:32,4:36:72.53:73,0,579	0/0:26,1:27:18.98:0,19,407	0/0:21,3:24:2.56:0,3,408	0/1:23,4:27:40.51:41,0,637	1/1:13,0:22:4.47:79,4,0	0/1:28,5:33:77.19:77,0,516	1/1:15,0:17:1.25:11,1,0	0/0:23,0:23:11.49:0,11,138	0/1:21,1:22:3.43:3,0,337	0/1:42,1:40:10.02:10,0,219	0/1:25,0:25:32.66:33,0,332	0/1:21,1:22:0.60:1,0,348	0/0:29,0:28:55.74:0,56,732	0/1:27,2:29:63.42:63,0,500	0/1:10,10:20:53.89:274,0,54	0/1:25,0:24:0.47:0,0,382	1/1:8,0:8:14.87:145,15,0
chr10	98903310	.	CT	C	2071.09	PASS	AB=0.921;AC=11;AF=0.196;AN=56;BaseQRankSum=6.949;DP=674;FS=9.507;HRun=11;HaplotypeScore=79.3773;InbreedingCoeff=0.6557;MQ=75.59;MQ0=0;MQRankSum=-0.028;QD=13.45;ReadPosRankSum=-2.219;VQSLOD=2.5051;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:37:77.50:0,77,414	0/0:10,1:11:2.42:0,2,231	0/1:15,1:16:4.03:4,0,111	0/1:13,1:14:34.22:34,0,80	0/0:19,1:21:29.30:0,29,487	0/0:22,0:22:54.05:0,54,561	0/0:29,2:31:25.87:0,26,671	1/1:9,29:38:82.66:654,83,0	0/0:26,2:28:31.90:0,32,737	0/0:23,0:23:54.12:0,54,565	0/0:17,1:18:20.50:0,21,411	0/0:21,1:25:29.36:0,29,496	0/0:37,3:40:30.46:0,30,889	0/0:16,0:16:39.09:0,39,410	0/0:32,0:32:81.20:0,81,864	1/1:1,31:33:91.93:745,92,0	0/0:28,2:31:50.34:0,50,707	0/0:4,0:22:51.52:0,52,279	0/0:21,0:21:51.07:0,51,517	0/0:21,1:22:38.51:0,39,615	0/1:14,2:16:13.25:13,0,287	0/0:16,0:16:45.11:0,45,480	0/0:18,1:19:26.47:0,26,480	0/0:19,0:19:54.13:0,54,568	0/0:26,0:26:60.12:0,60,619	1/1:3,23:27:67.91:544,68,0	0/0:35,0:39:89.57:0,90,874	1/1:0,10:10:29.97:246,30,0
chr10	98908077	.	G	GTACA	1482.15	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.756;DP=747;FS=8.547;HRun=0;HaplotypeScore=114.6528;InbreedingCoeff=0.9172;MQ=61.72;MQ0=6;MQRankSum=1.343;QD=23.16;ReadPosRankSum=1.530;VQSLOD=2.7283;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,25:44:45.15:1085,45,0	0/0:24,0:24:57.16:0,57,920	0/0:19,0:8:6.02:0,6,84	0/0:18,0:12:8.92:0,9,98	0/0:32,0:32:75.23:0,75,1172	0/0:23,0:23:63.20:0,63,1000	0/0:25,0:25:54.14:0,54,854	0/0:44,0:44:72.22:0,72,1099	0/0:29,0:29:78.25:0,78,1261	0/0:31,0:31:63.42:0,63,1125	0/0:24,0:24:54.17:0,54,871	0/0:28,0:28:69.24:0,69,1143	0/0:24,0:24:63.22:0,63,1042	0/0:33,0:33:96.29:0,96,1505	0/0:29,0:29:72.23:0,72,1166	0/0:23,0:23:48.14:0,48,737	0/0:27,0:27:39.11:0,39,614	1/1:10,10:20:21.07:517,21,0	0/0:17,0:15:21.06:0,21,320	0/0:24,0:24:54.17:0,54,854	0/0:25,0:25:60.15:0,60,952	0/0:25,0:25:66.04:0,66,967	0/0:20,0:20:54.18:0,54,887	0/0:25,0:25:63.17:0,63,989	0/0:31,0:31:60.17:0,60,930	0/0:35,0:35:84.28:0,84,1365	0/0:30,0:30:72.25:0,72,1192	0/0:18,0:18:39.13:0,39,619
chr10	98908325	.	A	AT	1580.99	PASS	AB=0.571;AC=7;AF=0.125;AN=56;BaseQRankSum=-2.690;DP=664;FS=0.505;HRun=9;HaplotypeScore=81.3110;InbreedingCoeff=0.8229;MQ=84.90;MQ0=2;MQRankSum=-1.173;QD=22.27;ReadPosRankSum=-1.529;VQSLOD=3.7288;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:98.98:0,99,859	0/0:13,0:13:38.99:0,39,338	0/0:45,0:32:6.95:0,7,223	0/0:40,0:29:17.12:0,17,228	0/0:10,0:11:32.03:0,32,266	0/0:23,0:23:56.96:0,57,491	0/0:20,0:21:53.02:0,53,448	1/1:2,20:22:54.05:547,54,0	1/1:1,15:16:40.35:434,40,0	0/0:31,0:31:89.98:0,90,781	0/0:14,0:14:35.97:0,36,309	0/0:34,0:34:92.63:0,93,795	0/0:23,0:23:65.99:0,66,572	0/0:22,0:22:50.96:0,51,438	0/0:35,0:35:83.94:0,84,728	0/0:18,0:18:44.95:0,45,381	0/0:37,0:37:92.94:0,93,802	0/0:34,0:34:86.95:0,87,751	0/0:21,0:21:47.94:0,48,409	0/0:23,0:23:62.98:0,63,547	0/0:21,0:21:47.98:0,48,414	0/0:14,0:14:32.97:0,33,282	0/0:10,0:10:23.97:0,24,206	0/0:17,0:17:41.98:0,42,364	0/0:28,0:28:83.96:0,84,724	1/1:4,20:25:37.98:631,38,0	0/0:21,0:20:47.96:0,48,417	0/1:2,6:8:11.01:118,0,11
chr10	98909116	.	A	ATTT	2740.17	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.269;DP=610;FS=9.263;HRun=9;HaplotypeScore=92.0920;InbreedingCoeff=0.9919;MQ=71.70;MQ0=0;MQRankSum=-0.920;QD=19.71;ReadPosRankSum=-4.279;VQSLOD=0.1545;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,23:30:49.72:945,50,0	0/0:6,0:6:15.03:0,15,176	0/0:11,0:10:23.92:0,24,237	0/0:17,0:17:31.83:0,32,358	0/0:21,0:21:54.12:0,54,669	0/0:21,0:21:60.19:0,60,757	0/0:25,0:26:57.05:0,57,686	1/1:6,0:33:79.64:611,80,0	0/0:25,0:25:72.17:0,72,867	0/0:13,0:13:39.12:0,39,482	0/0:19,0:19:14.97:0,15,426	0/0:30,0:30:73.73:0,74,927	0/0:23,0:23:63.10:0,63,762	0/0:21,0:21:54.15:0,54,669	0/0:24,0:24:63.16:0,63,781	1/1:9,0:25:31.67:326,32,0	0/0:38,0:38:99:0,111,1387	1/1:3,10:14:21.05:353,21,0	0/0:26,0:26:69.18:0,69,835	0/0:24,0:24:63.16:0,63,794	0/0:19,0:20:54.10:0,54,662	0/0:20,0:20:48.12:0,48,593	0/0:12,0:12:33.07:0,33,403	0/0:25,0:25:57.05:0,57,690	0/0:26,0:26:66.11:0,66,789	1/1:7,0:25:56.58:428,57,0	0/0:22,0:22:57.09:0,57,649	1/1:2,0:12:29.91:265,30,0
chr10	98909345	.	ACG	A	539.85	PASS	AB=0.962;AC=10;AF=0.179;AN=56;BaseQRankSum=9.154;DP=382;FS=0.559;HRun=0;HaplotypeScore=67.1169;InbreedingCoeff=0.4473;MQ=81.95;MQ0=0;MQRankSum=-5.519;QD=4.39;ReadPosRankSum=1.900;VQSLOD=1.8424;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:94.87:192,0,95	0/0:4,0:4:8.99:0,9,125	0/1:22,1:16:8.16:8,0,312	0/0:25,0:17:17.30:0,17,246	0/0:16,0:16:29.79:0,30,353	0/0:19,0:19:53.70:0,54,730	0/0:7,0:7:18.03:0,18,267	0/1:17,1:18:36.96:37,0,184	0/0:14,0:14:32:0,32,493	0/0:12,0:12:29.27:0,29,306	0/0:14,0:14:23.51:0,24,231	0/0:12,0:12:33.06:0,33,479	0/0:9,0:9:20.93:0,21,251	0/0:7,0:7:20.79:0,21,233	0/0:14,0:14:35.77:0,36,489	0/1:15,1:16:64.19:90,0,64	0/0:27,0:27:74.67:0,75,977	1/1:9,1:10:22.39:132,22,0	0/0:14,0:14:41.83:0,42,540	0/0:11,0:11:26.94:0,27,357	0/0:10,0:10:27.01:0,27,352	0/0:7,0:7:18:0,18,232	0/0:8,0:8:21:0,21,281	0/0:8,0:8:24.04:0,24,380	0/0:10,0:10:20.94:0,21,292	1/1:20,0:20:47.90:221,48,0	0/0:9,0:9:26.98:0,27,385	1/1:1,0:1:2.74:12,3,0
chr10	98909347	.	GCC	G	1755.59	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=3.604;DP=384;FS=3.921;HRun=11;HaplotypeScore=64.9664;InbreedingCoeff=0.8474;MQ=81.36;MQ0=1;MQRankSum=-4.694;QD=18.68;ReadPosRankSum=0.107;VQSLOD=2.6718;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,25:32:57.05:594,57,0	0/0:3,0:3:6.02:0,6,91	0/0:27,0:17:3.88:0,4,210	0/0:27,0:18:4.33:0,4,200	0/0:14,0:16:22.92:0,23,274	0/0:17,0:19:41.10:0,41,549	0/0:8,0:9:21.04:0,21,265	1/1:9,5:15:13.81:157,14,0	0/0:12,0:13:26.58:0,27,378	0/0:11,0:12:14.48:0,14,166	0/0:14,0:14:12.02:0,12,162	0/0:11,0:12:30.09:0,30,440	0/0:10,0:10:14.99:0,15,178	0/0:6,0:8:14.12:0,14,156	0/0:11,0:12:26.58:0,27,378	1/1:7,9:16:30.04:319,30,0	0/0:24,0:29:61.60:0,62,754	1/1:1,9:10:24.06:255,24,0	0/0:13,0:14:32.08:0,32,428	0/0:10,0:11:18.06:0,18,260	0/0:10,0:11:18.05:0,18,243	0/0:6,0:6:12.02:0,12,158	0/0:6,0:6:12.04:0,12,184	0/0:10,0:10:24.08:0,24,366	0/0:9,0:9:16.30:0,16,226	1/1:2,18:20:54.11:575,54,0	0/0:9,0:9:21.06:0,21,302	1/1:0,1:1:3.01:32,3,0
chr10	98909368	.	AT	A	476.84	PASS	AB=0.874;AC=12;AF=0.214;AN=56;BaseQRankSum=1.972;DP=474;FS=0.549;HRun=14;HaplotypeScore=85.7124;InbreedingCoeff=0.2721;MQ=77.99;MQ0=3;MQRankSum=1.736;QD=3.31;ReadPosRankSum=-0.734;VQSLOD=0.4819;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:40:54.02:0,54,356	0/0:6,0:7:14.85:0,15,126	0/0:34,1:18:16.53:0,17,105	0/1:40,1:25:30.47:30,0,115	0/0:14,1:16:6.29:0,6,185	0/0:20,1:22:12.44:0,12,258	0/0:11,0:11:0.86:0,1,138	1/1:4,8:13:11.22:153,11,0	0/0:13,0:13:17.31:0,17,154	0/1:12,0:12:2.48:2,0,101	0/0:16,0:17:28.87:0,29,269	0/0:12,0:12:6.88:0,7,170	0/0:11,0:11:15.88:0,16,134	0/0:10,0:10:1.74:0,2,129	0/0:21,0:22:46.31:0,46,377	0/1:15,8:23:10.46:202,0,10	0/0:32,1:33:20.61:0,21,413	0/0:8,0:10:17.70:0,18,122	0/1:13,2:15:51.83:52,0,134	0/0:13,1:14:4.28:0,4,161	0/0:14,0:15:31.40:0,31,257	0/1:7,1:8:2.61:3,0,110	0/1:4,2:7:26.89:29,0,27	0/0:11,0:11:28.24:0,28,240	0/0:15,1:16:15.89:0,16,273	1/1:16,3:20:19.40:115,19,0	0/0:14,0:14:24.32:0,24,193	1/1:2,1:3:5.91:41,6,0
chr10	98909703	.	AT	A	1733.16	PASS	AB=0.625;AC=9;AF=0.161;AN=56;BaseQRankSum=9.499;DP=379;FS=17.752;HRun=9;HaplotypeScore=41.6450;InbreedingCoeff=0.7669;MQ=79.29;MQ0=1;MQRankSum=0.017;QD=16.51;ReadPosRankSum=-0.241;VQSLOD=1.9934;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:57.02:518,57,0	0/0:3,0:3:9.01:0,9,94	0/0:17,0:10:8.27:0,8,84	0/0:12,0:9:16.80:0,17,94	0/0:8,0:8:24.06:0,24,266	0/0:20,0:20:57.16:0,57,648	0/0:5,0:5:12.03:0,12,130	1/1:10,25:35:71.95:642,72,0	0/0:5,0:5:7.08:0,7,131	0/0:24,0:24:63.16:0,63,696	0/0:11,0:11:26.94:0,27,269	0/0:14,0:14:36.11:0,36,415	0/0:13,0:13:36.08:0,36,397	0/0:12,1:13:5.64:0,6,319	0/0:16,0:16:48.13:0,48,545	0/0:9,0:9:15.04:0,15,172	0/0:17,0:17:48.14:0,48,553	1/1:3,12:15:27.01:246,27,0	0/0:15,0:15:33.09:0,33,373	0/0:7,0:7:18.05:0,18,208	0/0:11,0:11:30.05:0,30,317	0/0:5,0:5:12.04:0,12,138	0/0:3,0:3:9.03:0,9,104	0/0:4,0:4:12.02:0,12,129	0/0:9,0:9:21.06:0,21,242	0/1:8,12:20:10.37:325,0,10	0/0:32,0:32:93.21:0,93,1038	1/1:4,6:10:18.01:165,18,0
chr10	98909956	.	GTTAT	G	1763.34	PASS	AB=0.899;AC=12;AF=0.250;AN=48;BaseQRankSum=7.998;DP=269;FS=0.756;HRun=0;HaplotypeScore=45.8525;InbreedingCoeff=0.4827;MQ=69.79;MQ0=0;MQRankSum=-1.240;QD=14.11;ReadPosRankSum=-0.759;VQSLOD=2.1972;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,11:26:33.11:507,33,0	./.	0/0:11,0:9:3.01:0,3,71	./.	0/0:12,0:12:12.03:0,12,241	0/0:11,0:11:24.08:0,24,574	0/0:7,0:7:9.03:0,9,197	1/1:20,12:32:36.08:495,36,0	0/0:3,0:3:3.01:0,3,72	0/0:11,0:11:15.05:0,15,359	0/0:7,0:7:6.02:0,6,144	0/0:9,0:9:9.03:0,9,215	0/0:3,0:3:6.02:0,6,144	0/0:4,0:4:6.02:0,6,144	0/0:7,0:7:3.01:0,3,72	./.	0/0:13,0:13:24.08:0,24,555	1/1:8,10:17:30.10:478,30,0	0/0:12,0:12:9.03:0,9,201	0/0:8,0:8:6.02:0,6,144	0/1:6,1:7:41.75:42,0,66	0/0:1,0:1:3.01:0,3,72	./.	0/0:1,0:1:3.01:0,3,72	0/1:11,1:12:35.73:36,0,203	1/1:9,6:15:21.06:315,21,0	0/0:12,0:12:21.07:0,21,502	1/1:11,4:15:3.01:48,3,0
chr10	98910407	.	G	GTA	1989.07	PASS	AB=0.603;AC=6;AF=0.107;AN=56;BaseQRankSum=-9.127;DP=545;FS=3.481;HRun=0;HaplotypeScore=62.5385;InbreedingCoeff=0.5044;MQ=62.90;MQ0=5;MQRankSum=1.761;QD=22.86;ReadPosRankSum=-2.876;VQSLOD=3.2423;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:44.97:0,45,537	0/0:6,0:6:15.05:0,15,189	1/1:14,0:7:2.88:15,3,0	0/0:16,0:5:2.50:0,2,9	0/0:26,0:26:72.23:0,72,906	0/0:21,0:21:54.14:0,54,653	0/0:17,0:17:45.11:0,45,529	1/1:10,31:41:37.71:1333,38,0	0/0:13,0:13:39.10:0,39,464	0/0:24,0:24:72.21:0,72,884	0/0:24,0:24:60.16:0,60,729	0/0:16,0:17:38.95:0,39,467	0/0:17,0:17:48.09:0,48,550	0/0:21,0:23:50.75:0,51,538	0/0:21,0:20:42.07:0,42,475	0/0:20,0:20:45.13:0,45,555	0/0:19,0:18:51.16:0,51,643	0/0:16,0:16:45.12:0,45,551	0/0:12,0:12:24.06:0,24,290	0/0:32,0:32:87.25:0,87,1069	0/0:17,0:17:48.15:0,48,605	0/0:12,0:12:30.07:0,30,350	0/0:18,0:18:45.11:0,45,540	0/0:14,0:14:33:0,33,415	0/0:22,0:22:57.18:0,57,719	0/1:8,15:23:62.23:631,0,62	0/0:29,0:27:81.26:0,81,1020	0/1:3,6:9:60.57:135,0,61
chr10	98910576	.	CACA	C	2658.17	PASS	AB=0.514;AC=5;AF=0.089;AN=56;BaseQRankSum=9.295;DP=586;FS=2.582;HRun=0;HaplotypeScore=83.5691;InbreedingCoeff=0.7824;MQ=83.51;MQ0=0;MQRankSum=-5.952;QD=49.23;ReadPosRankSum=-2.042;VQSLOD=4.6974;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,2526	0/0:6,0:6:18.06:0,18,420	0/0:21,0:21:63.22:0,63,1425	0/0:15,0:15:45.09:0,45,854	0/0:27,0:27:81.26:0,81,1918	0/0:20,0:20:60.21:0,60,1452	0/0:23,0:23:69.24:0,69,1701	1/1:0,26:26:72.25:1338,72,0	0/0:21,0:21:63.22:0,63,1520	0/0:23,0:23:69.24:0,69,1675	0/0:16,0:16:48.15:0,48,1101	0/0:21,0:21:63.22:0,63,1540	0/0:16,0:16:45.15:0,45,1109	0/0:14,0:14:42.14:0,42,1035	0/0:24,0:24:72.23:0,72,1693	0/0:18,0:18:54.19:0,54,1331	0/0:28,0:28:84.29:0,84,2031	0/0:28,0:28:84.29:0,84,2033	0/0:20,0:20:60.21:0,60,1453	0/0:20,0:20:57.20:0,57,1405	0/0:32,0:32:96.33:0,96,2315	0/0:17,0:17:51.18:0,51,1257	0/0:15,0:15:45.15:0,45,1109	0/0:24,0:24:72.25:0,72,1764	0/0:18,0:18:54.19:0,54,1281	0/1:1,18:19:16.78:947,0,17	0/0:27,0:27:81.28:0,81,1996	1/1:0,9:9:27.09:503,27,0
chr10	98910689	.	CT	C	1651.54	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.412;DP=698;FS=4.496;HRun=8;HaplotypeScore=86.7845;InbreedingCoeff=0.9136;MQ=81.00;MQ0=0;MQRankSum=-2.520;QD=22.02;ReadPosRankSum=2.325;VQSLOD=4.1426;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,44:48:99:1165,122,0	0/0:7,0:7:18.03:0,18,203	0/0:25,0:24:39.08:0,39,410	0/0:22,2:23:31.52:0,32,399	0/0:20,0:20:60.18:0,60,718	0/0:23,0:23:60.16:0,60,697	0/0:27,0:27:66.19:0,66,787	0/0:11,0:29:66.39:0,66,361	0/0:23,0:23:54.08:0,54,600	0/0:23,0:24:69.06:0,69,799	0/0:22,0:22:51.15:0,51,605	0/0:31,0:31:90.24:0,90,1048	0/0:15,0:15:39.11:0,39,458	0/0:24,0:24:69.20:0,69,822	0/0:31,0:31:88.15:0,88,1053	0/0:22,0:22:52.07:0,52,695	0/0:35,0:35:99:0,102,1192	1/1:0,27:27:63.10:608,63,0	0/0:28,0:28:78.15:0,78,855	0/0:25,0:25:57.14:0,57,656	0/0:53,0:53:99:0,144,1727	0/0:19,0:19:54.15:0,54,632	0/0:13,0:13:36.11:0,36,431	0/0:34,0:35:99:0,102,1186	0/0:17,0:17:51.09:0,51,559	0/0:5,0:20:52.18:0,52,318	0/0:26,0:26:69.21:0,69,833	0/0:3,0:4:2.88:0,3,15
chr10	98911198	.	CG	C	2033.91	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.608;DP=669;FS=0.000;HRun=3;HaplotypeScore=64.7477;InbreedingCoeff=0.9897;MQ=86.24;MQ0=0;MQRankSum=-5.551;QD=31.29;ReadPosRankSum=2.611;VQSLOD=3.5169;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,38:42:99:1338,108,0	0/0:5,0:5:15.05:0,15,216	0/0:22,0:22:63.14:0,63,826	0/0:23,0:23:57.14:0,57,770	0/0:23,0:23:57.19:0,57,818	0/0:28,0:28:78.26:0,78,1115	0/0:26,0:26:72.22:0,72,1015	0/0:26,0:26:75.25:0,75,1064	0/0:22,0:22:63.21:0,63,907	0/0:21,0:21:57.19:0,57,820	0/0:12,0:12:33.09:0,33,456	0/0:32,0:32:93.31:0,93,1334	0/0:22,0:22:66.21:0,66,930	0/0:28,0:28:75.25:0,75,1078	0/0:33,0:33:99:0,99,1389	0/0:20,0:20:57.19:0,57,818	0/0:39,0:39:99:0,117,1646	1/1:0,23:23:66.21:818,66,0	0/0:19,0:19:54.16:0,54,757	0/0:17,0:17:45.11:0,45,590	0/0:40,0:40:99:0,114,1602	0/0:21,0:21:57.16:0,57,784	0/0:16,0:16:45.13:0,45,607	0/0:38,0:38:99:0,111,1535	0/0:22,0:22:66.21:0,66,934	0/0:21,0:21:57.17:0,57,787	0/0:21,0:21:63.21:0,63,906	0/0:7,0:7:21.07:0,21,302
chr10	98912320	.	T	TA	695.08	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.644;DP=463;FS=9.412;HRun=10;HaplotypeScore=51.6090;InbreedingCoeff=0.8732;MQ=59.97;MQ0=13;MQRankSum=-5.644;QD=16.16;ReadPosRankSum=-1.333;VQSLOD=2.9185;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:28:24.93:0,25,411	0/0:7,0:7:11.97:0,12,98	0/0:16,0:12:26.46:0,26,205	0/0:10,0:2:5.99:0,6,49	0/0:26,2:28:53.92:0,54,443	0/0:13,0:13:26.96:0,27,222	0/0:13,0:13:32.78:0,33,251	1/1:11,4:13:18.03:183,18,0	0/0:7,0:7:14.96:0,15,119	0/0:19,0:20:37.93:0,38,298	0/0:17,0:17:38.92:0,39,317	0/0:26,0:25:59.88:0,60,490	0/0:15,0:15:35.93:0,36,293	0/0:11,0:11:26.95:0,27,219	0/0:18,0:18:38.94:0,39,320	0/0:14,0:14:32.94:0,33,271	0/0:21,0:18:44.93:0,45,366	0/0:25,0:23:37.44:0,37,318	0/0:16,0:16:35.93:0,36,295	0/0:15,1:15:6.96:0,7,262	0/0:13,0:12:26.96:0,27,222	0/0:7,0:7:20.98:0,21,172	0/0:6,0:7:19.98:0,20,148	0/0:17,0:14:40.96:0,41,320	0/0:26,0:24:47.90:0,48,394	1/1:10,14:25:56.97:581,57,0	0/0:24,0:24:58.93:0,59,471	1/1:1,2:3:6.02:64,6,0
chr10	98912336	.	GT	G	1339.54	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.795;DP=459;FS=7.651;HRun=2;HaplotypeScore=57.1224;InbreedingCoeff=0.9489;MQ=65.07;MQ0=0;MQRankSum=-5.195;QD=31.89;ReadPosRankSum=-2.109;VQSLOD=2.1044;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.19:0,72,1052	0/0:5,0:5:12.04:0,12,180	0/0:12,0:13:8.35:0,8,327	0/0:5,0:5:15.04:0,15,197	0/0:25,0:25:72.04:0,72,977	0/0:16,0:16:42.14:0,42,622	0/0:16,0:16:45.15:0,45,674	1/1:2,11:12:33.11:427,33,0	0/0:10,0:10:27.07:0,27,383	0/0:18,0:18:48.15:0,48,682	0/0:16,0:16:39.13:0,39,583	0/0:25,0:25:72.12:0,72,1006	0/0:15,0:15:42.09:0,42,584	0/0:14,0:14:36.12:0,36,539	0/0:16,0:16:45.11:0,45,649	0/0:18,0:18:48.16:0,48,718	0/0:17,0:16:45.13:0,45,651	0/0:24,0:24:69.19:0,69,1009	0/0:20,0:20:54.17:0,54,791	0/0:16,0:16:48.16:0,48,718	0/0:18,0:18:51.16:0,51,742	0/0:12,0:12:36.12:0,36,538	0/0:11,0:11:30.10:0,30,449	0/0:15,0:14:45.14:0,45,653	0/0:23,0:23:63.17:0,63,919	1/1:1,24:25:72.17:896,72,0	0/0:24,0:24:72.16:0,72,1028	1/1:0,4:4:12.04:156,12,0
chr10	98912448	.	C	CAG	529.18	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=2.303;DP=789;FS=1.829;HRun=0;HaplotypeScore=126.4486;InbreedingCoeff=0.4135;MQ=54.86;MQ0=34;MQRankSum=-2.197;QD=6.87;ReadPosRankSum=-3.045;VQSLOD=2.8220;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:63:99:0,154,2058	0/0:5,0:5:15.04:0,15,211	0/0:48,0:16:42.88:0,43,488	0/0:61,0:15:14.71:0,15,179	0/0:26,0:26:57.07:0,57,773	0/0:32,0:31:69.80:0,70,923	0/0:33,0:33:80.68:0,81,998	0/1:40,0:26:65.27:65,0,181	0/0:12,0:12:27.06:0,27,388	0/0:19,0:17:48.07:0,48,648	0/0:15,0:15:36.09:0,36,495	0/0:27,0:27:74.79:0,75,982	0/0:20,0:20:52.89:0,53,679	0/0:19,0:19:47.96:0,48,588	0/0:22,0:22:57.18:0,57,847	1/1:7,8:14:30.09:541,30,0	0/0:36,0:36:99:0,99,1333	0/0:40,0:40:99:0,107,1381	0/0:21,0:13:36.02:0,36,420	0/0:18,0:17:36.10:0,36,517	0/0:83,0:79:99:0,180,2399	0/0:18,0:17:50.99:0,51,700	0/0:19,0:19:47.93:0,48,631	0/0:43,0:43:99:0,114,1589	0/0:13,0:13:30.05:0,30,392	0/1:22,0:21:37.58:38,0,143	0/0:13,0:12:36.11:0,36,527	0/0:1,0:1:2.84:0,3,14
chr10	98912568	.	CACAG	C	644.45	PASS	AB=0.924;AC=4;AF=0.071;AN=56;BaseQRankSum=7.495;DP=732;FS=19.455;HRun=0;HaplotypeScore=141.9806;InbreedingCoeff=-0.0974;MQ=49.63;MQ0=44;MQRankSum=-4.439;QD=5.65;ReadPosRankSum=-5.119;VQSLOD=-0.5046;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:58:75.53:0,76,1405	0/0:5,0:5:6.91:0,7,127	0/0:11,1:6:10.83:0,11,149	0/0:12,0:4:2.64:0,3,18	0/0:26,0:22:38.39:0,38,632	0/1:20,0:19:10.64:11,0,648	0/0:34,0:30:56.68:0,57,1049	0/1:25,14:27:50.36:472,0,50	0/0:24,0:23:49.41:0,49,986	0/0:28,0:25:32.28:0,32,1166	0/0:8,0:7:18.05:0,18,405	0/0:30,0:30:27.69:0,28,1483	0/0:26,0:24:27.78:0,28,921	0/0:32,0:30:72.98:0,73,1508	0/0:31,0:30:62.82:0,63,1253	0/1:32,0:32:19.80:20,0,140	0/0:25,0:25:50.13:0,50,1144	0/0:26,0:25:28.38:0,28,902	0/0:33,0:26:51.06:0,51,986	0/0:14,0:13:23.95:0,24,504	0/0:69,0:67:99:0,109,2125	0/0:13,0:10:8.85:0,9,143	0/0:11,0:10:19.31:0,19,422	0/0:60,0:59:99:0,116,2568	0/0:13,0:12:3.61:0,4,456	0/1:22,1:21:99:248,0,240	0/0:19,0:18:47.96:0,48,912	0/0:8,0:7:5.99:0,6,57
chr10	98912572	.	GACACAGACACACAC	G	408.89	PASS	AB=1.000;AC=4;AF=0.074;AN=54;BaseQRankSum=6.324;DP=709;FS=6.072;HRun=0;HaplotypeScore=243.2936;InbreedingCoeff=0.3494;MQ=49.63;MQ0=42;MQRankSum=-5.555;QD=4.17;ReadPosRankSum=-1.001;VQSLOD=1.3894;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:56:60.76:0,61,531	0/0:5,0:5:6.91:0,7,166	0/0:8,0:5:6.41:0,6,43	./.	0/0:27,0:22:39.01:0,39,757	0/0:20,0:19:42.04:0,42,1137	0/0:34,0:30:51.94:0,52,712	0/1:41,0:28:57.89:168,0,58	0/0:24,0:23:44.75:0,45,708	0/0:27,0:24:50.18:0,50,1214	0/0:10,0:9:24.04:0,24,751	0/0:31,0:31:79.03:0,79,1972	0/0:27,0:25:61.60:0,62,1264	0/0:33,0:31:72.50:0,72,1710	0/0:30,0:29:67.27:0,67,1508	1/1:5,24:31:11.65:307,12,0	0/0:24,0:24:60.27:0,60,1638	0/1:26,0:25:43.58:44,0,350	0/0:27,0:21:47.27:0,47,923	0/0:14,0:13:24.01:0,24,353	0/0:62,0:60:95.35:0,95,1729	0/0:12,0:9:9.02:0,9,175	0/0:11,0:10:21.14:0,21,490	0/0:60,0:59:99:0,114,3129	0/0:14,0:13:25.97:0,26,894	0/0:25,0:23:35.86:0,36,604	0/0:16,0:15:44.86:0,45,1177	0/0:8,0:7:6.02:0,6,158
chr10	98912576	.	CAG	C	1012.10	PASS	AB=0.985;AC=18;AF=0.333;AN=54;BaseQRankSum=7.513;DP=712;FS=31.154;HRun=0;HaplotypeScore=122.3520;InbreedingCoeff=0.1921;MQ=49.80;MQ0=40;MQRankSum=-5.423;QD=2.93;ReadPosRankSum=-2.758;VQSLOD=0.5935;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:58:59.84:0,60,482	0/1:5,0:5:1.04:1,0,21	0/0:7,0:4:7.76:0,8,47	./.	0/1:29,0:24:4.53:5,0,268	0/0:22,0:21:16.87:0,17,363	0/0:33,0:29:37.02:0,37,425	1/1:41,0:29:39.82:277,40,0	0/0:20,0:19:25.11:0,25,331	0/1:30,0:27:19.16:19,0,445	0/0:11,0:10:16.17:0,16,214	0/1:32,1:34:4.80:5,0,710	0/1:30,0:28:27.93:28,0,517	0/1:31,1:30:27.79:28,0,611	0/0:31,0:30:27.50:0,27,583	1/1:28,0:28:11.18:76,11,0	0/1:24,0:24:4.76:5,0,445	0/1:25,2:26:99:124,0,256	0/0:21,0:17:28.45:0,28,410	0/0:14,0:13:15.59:0,16,167	0/0:60,0:58:70.37:0,70,894	0/1:14,0:11:9.60:10,0,55	0/0:11,0:10:19.68:0,20,256	0/0:59,0:58:17.26:0,17,1131	0/1:15,0:14:20.79:21,0,306	1/1:25,3:26:10.29:491,10,0	0/0:17,0:16:42.95:0,43,491	1/1:1,7:7:6.02:90,6,0
chr10	98912578	.	GAC	G	704.35	PASS	AB=0.917;AC=24;AF=0.462;AN=52;BaseQRankSum=4.290;DP=722;FS=1.364;HRun=0;HaplotypeScore=128.1098;InbreedingCoeff=-0.2739;MQ=49.96;MQ0=39;MQRankSum=0.596;QD=1.23;ReadPosRankSum=2.117;VQSLOD=2.5499;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:57:0.06:0,0,0	1/1:3,1:5:3.01:33,3,0	./.	./.	0/1:25,2:23:73.69:74,0,159	0/1:16,6:22:38.19:38,0,266	0/1:30,2:28:23.82:24,0,80	0/0:41,0:29:10.69:0,11,69	0/0:21,0:21:20.03:0,20,196	0/1:36,0:32:3.04:3,0,227	0/1:10,0:9:31.11:31,0,117	0/1:28,5:34:27.11:27,0,391	0/0:30,0:28:1.96:0,2,431	0/1:28,2:30:73.79:74,0,322	0/1:28,2:31:60.23:60,0,290	1/1:28,0:28:5.98:36,6,0	0/1:20,5:26:99:103,0,309	0/1:24,0:26:16.02:70,0,16	0/0:23,0:19:18.42:0,18,215	1/1:13,1:13:2.88:33,3,0	0/1:62,2:62:22.56:23,0,379	0/1:15,0:12:9.96:10,0,39	0/0:10,0:11:14.84:0,15,180	0/1:55,3:58:71.25:71,0,574	0/1:15,0:14:6.61:7,0,268	0/1:29,0:27:23.96:92,0,24	0/0:17,0:16:17.80:0,18,234	1/1:8,0:7:5.98:47,6,0
chr10	98915306	.	GA	G	430.18	PASS	AB=0.833;AC=3;AF=0.054;AN=56;BaseQRankSum=5.037;DP=420;FS=5.478;HRun=9;HaplotypeScore=46.1905;InbreedingCoeff=0.5666;MQ=81.67;MQ0=0;MQRankSum=-2.411;QD=15.36;ReadPosRankSum=0.626;VQSLOD=3.3918;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1132	0/0:5,0:5:15.04:0,15,173	0/0:22,0:19:18.12:0,18,292	0/0:16,0:15:23.74:0,24,235	0/0:10,1:12:8.47:0,8,333	0/0:7,0:7:21.06:0,21,242	0/0:13,0:13:36.11:0,36,415	0/0:14,0:14:33.10:0,33,381	0/0:9,0:9:27.06:0,27,301	0/0:18,0:18:23.70:0,24,524	0/0:15,0:15:45.12:0,45,511	0/0:10,0:10:27.08:0,27,312	0/0:17,0:17:51.14:0,51,579	0/0:11,0:11:27.08:0,27,311	0/0:16,0:16:45.13:0,45,519	1/1:0,23:23:56.55:521,57,0	0/0:17,1:18:26.71:0,27,561	0/0:16,0:16:45.13:0,45,519	0/0:14,1:15:14.64:0,15,413	0/0:7,0:7:18.05:0,18,208	0/0:32,0:32:93.26:0,93,1061	0/0:18,0:18:51.14:0,51,578	0/0:11,1:12:8.65:0,9,352	0/0:17,0:18:53.99:0,54,603	0/0:12,1:13:11.65:0,12,388	0/0:13,0:13:39.09:0,39,430	0/0:12,0:12:36.10:0,36,407	0/1:4,1:5:12.42:12,0,120
chr10	98918401	.	A	AC	215.38	PASS	AB=0.571;AC=1;AF=0.018;AN=56;BaseQRankSum=-1.044;DP=635;FS=5.547;HRun=9;HaplotypeScore=76.3531;InbreedingCoeff=-0.0235;MQ=79.96;MQ0=0;MQRankSum=0.527;QD=8.97;ReadPosRankSum=-1.160;VQSLOD=1.9829;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:76.98:0,77,656	0/0:9,0:9:14.98:0,15,130	0/0:22,1:27:13.43:0,13,373	0/0:19,0:17:21.42:0,21,178	0/0:25,0:25:65.92:0,66,558	0/0:19,0:20:50.01:0,50,421	0/0:21,0:21:53.99:0,54,469	0/0:29,0:30:43.98:0,44,371	0/0:27,0:27:71.01:0,71,605	0/0:21,0:22:44.01:0,44,370	0/0:13,0:13:29.97:0,30,260	0/0:24,0:25:52.98:0,53,445	0/0:20,0:20:51.44:0,51,444	0/0:30,0:31:76.94:0,77,646	0/0:26,1:27:34.82:0,35,520	0/1:6,18:24:62.06:290,0,62	0/0:27,0:27:74.98:0,75,650	0/0:24,0:24:62.98:0,63,546	0/0:16,0:18:31:0,31,239	0/0:19,0:20:38.01:0,38,318	0/0:29,0:30:65.88:0,66,563	0/0:17,0:17:41.97:0,42,364	0/0:19,0:19:38.93:0,39,332	0/0:31,0:32:85.05:0,85,715	0/0:13,0:14:32.02:0,32,266	0/0:23,0:24:50:0,50,422	0/0:31,0:31:81.44:0,81,703	0/0:5,0:5:5.99:0,6,52
chr10	98918503	.	C	CT	1640.58	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.754;DP=631;FS=1.150;HRun=7;HaplotypeScore=61.8776;InbreedingCoeff=0.9982;MQ=72.45;MQ0=0;MQRankSum=-2.199;QD=25.24;ReadPosRankSum=1.810;VQSLOD=4.3047;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,34:37:84.26:1014,84,0	0/0:8,0:8:24.04:0,24,232	0/0:21,0:21:39.50:0,40,370	0/0:17,0:16:38.85:0,39,362	0/0:23,0:23:63.10:0,63,608	0/0:23,0:23:66.09:0,66,632	0/0:30,0:30:72.11:0,72,695	0/0:32,0:32:81.10:0,81,773	0/0:22,0:22:60.09:0,60,579	0/0:26,0:26:72.08:0,72,685	0/0:17,0:17:48.08:0,48,464	0/0:24,0:24:66.10:0,66,637	0/0:23,0:23:48.06:0,48,463	0/0:23,0:23:66.10:0,66,637	0/0:21,0:21:51.07:0,51,492	0/0:24,0:24:63.10:0,63,608	0/0:28,0:28:81.13:0,81,782	1/1:5,23:28:63.18:748,63,0	0/0:25,0:25:66.10:0,66,637	0/0:26,0:26:69.11:0,69,666	0/0:13,0:13:30.03:0,30,284	0/0:21,0:21:54.08:0,54,522	0/0:16,0:16:39.06:0,39,377	0/0:20,0:20:60.10:0,60,579	0/0:12,0:12:33.05:0,33,319	0/0:27,0:27:81.13:0,81,782	0/0:34,0:34:96.15:0,96,927	0/0:10,0:10:30.05:0,30,290
chr10	98919018	.	G	GA	1308.72	PASS	AB=0.810;AC=8;AF=0.143;AN=56;BaseQRankSum=-4.296;DP=654;FS=5.769;HRun=11;HaplotypeScore=61.9047;InbreedingCoeff=0.6728;MQ=49.32;MQ0=41;MQRankSum=-0.765;QD=12.46;ReadPosRankSum=-3.125;VQSLOD=2.6052;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:55.46:0,55,402	0/0:6,0:6:8.95:0,9,70	0/0:27,0:2:0.88:0,1,2	0/1:22,0:5:13.69:14,0,26	0/0:21,1:23:55.82:0,56,422	0/0:21,0:21:41.81:0,42,322	0/0:17,0:16:17.79:0,18,260	1/1:11,19:30:59.67:550,60,0	0/0:21,0:21:18:0,18,296	0/0:23,2:24:25.32:0,25,365	0/0:23,0:23:49.90:0,50,386	0/0:17,0:17:38.24:0,38,292	0/0:16,0:15:32.86:0,33,253	0/0:22,0:23:61.80:0,62,470	0/0:23,0:23:52.83:0,53,400	1/1:6,9:15:37.09:331,37,0	0/0:52,0:47:92.32:0,92,699	0/0:24,0:22:46.83:0,47,349	0/0:23,0:22:46.85:0,47,345	0/0:30,1:31:46.98:0,47,531	0/0:21,0:21:44.30:0,44,348	0/0:18,0:18:26.89:0,27,209	0/0:26,0:26:52.76:0,53,395	0/0:30,0:30:48.76:0,49,391	0/0:19,0:19:9.38:0,9,247	0/1:10,16:24:9.66:437,0,10	0/0:24,0:24:52.79:0,53,438	1/1:5,4:5:13.84:127,14,0
chr10	98919448	.	CGT	C	215.87	PASS	AB=0.943;AC=14;AF=0.318;AN=44;BaseQRankSum=3.424;DP=663;FS=0.000;HRun=0;HaplotypeScore=84.6154;InbreedingCoeff=-0.1761;MQ=72.83;MQ0=7;MQRankSum=-0.228;QD=0.79;ReadPosRankSum=2.393;VQSLOD=0.6602;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:47:33:0,33,356	0/0:10,0:10:3.01:0,3,44	./.	./.	0/1:23,0:22:19.77:20,0,98	0/0:23,0:23:21.07:0,21,303	0/1:21,1:21:22.89:23,0,59	./.	1/1:13,0:16:5.85:46,6,0	0/0:18,0:18:9.02:0,9,107	0/0:13,0:12:3.01:0,3,44	0/1:24,2:26:14.20:14,0,125	./.	0/1:21,2:24:16.84:17,0,159	0/1:27,1:36:19.90:20,0,64	0/0:24,0:27:30.01:0,30,302	0/1:23,4:27:29.99:112,0,30	0/1:25,1:26:10.86:11,0,202	0/0:15,0:12:0:0,0,0	0/1:21,1:22:20.65:21,0,79	0/0:44,0:42:15.05:0,15,205	./.	0/1:17,1:18:19.93:20,0,75	0/0:40,2:42:1.13:0,1,342	0/0:20,0:20:12.04:0,12,175	./.	0/1:22,0:22:19.31:19,0,99	1/1:7,0:8:5.68:28,6,0
chr10	98919524	.	GC	G	553.08	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.767;DP=561;FS=6.252;HRun=4;HaplotypeScore=65.6335;InbreedingCoeff=0.9918;MQ=82.54;MQ0=2;MQRankSum=-2.655;QD=24.05;ReadPosRankSum=2.597;VQSLOD=2.4492;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.25:0,78,1075	0/0:10,0:10:21.07:0,21,294	0/0:34,0:32:80.21:0,80,1024	0/0:41,0:35:44.86:0,45,931	0/0:18,0:18:51.15:0,51,685	0/0:17,0:17:45.15:0,45,630	0/0:31,0:31:84.20:0,84,1102	0/0:33,0:33:87.29:0,87,1214	0/0:16,0:16:48.12:0,48,647	0/0:9,0:9:24.08:0,24,323	0/0:11,0:11:30.10:0,30,420	0/0:21,0:21:60.20:0,60,838	0/0:13,0:13:30.10:0,30,409	0/0:24,0:24:63.20:0,63,864	0/0:17,0:17:48.16:0,48,672	1/1:2,21:23:54.16:648,54,0	0/0:18,0:18:48.16:0,48,672	0/0:13,0:13:36.12:0,36,503	0/0:15,0:15:39.13:0,39,546	0/0:18,0:18:51.17:0,51,712	0/0:32,0:31:84.28:0,84,1175	0/0:15,0:15:45.15:0,45,630	0/0:11,0:11:33.11:0,33,460	0/0:26,0:26:72.24:0,72,1008	0/0:16,0:16:48.16:0,48,666	0/0:24,0:24:66.22:0,66,923	0/0:12,0:12:36.04:0,36,433	0/0:12,0:12:30.10:0,30,420
chr10	98919647	.	GT	G	265.72	PASS	AB=0.889;AC=3;AF=0.054;AN=56;BaseQRankSum=4.002;DP=639;FS=0.959;HRun=9;HaplotypeScore=66.8855;InbreedingCoeff=0.6933;MQ=72.54;MQ0=0;MQRankSum=-1.094;QD=9.84;ReadPosRankSum=1.344;VQSLOD=2.3027;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1236	0/0:9,0:9:27.08:0,27,312	0/0:26,0:24:51.44:0,51,513	0/0:21,0:19:38.13:0,38,375	0/0:25,0:25:69.20:0,69,796	0/0:26,0:26:78.23:0,78,900	0/0:20,0:20:57.16:0,57,648	0/0:26,0:26:57.08:0,57,627	0/0:24,0:24:69.21:0,69,796	0/0:25,0:25:60.17:0,60,686	0/0:22,0:22:48.14:0,48,554	0/0:24,0:24:66.19:0,66,753	0/0:15,0:15:42.12:0,42,485	0/0:29,0:29:75.21:0,75,855	0/0:32,0:32:84.23:0,84,959	1/1:3,16:19:10.44:350,10,0	0/0:30,0:29:66.18:0,66,752	0/0:19,0:19:54.13:0,54,598	0/0:20,0:20:48.14:0,48,554	0/0:26,0:26:75.22:0,75,866	0/0:27,0:27:72.20:0,72,820	0/0:22,0:22:60.16:0,60,679	0/0:18,0:19:45.10:0,45,493	0/0:20,1:21:35.74:0,36,656	0/0:12,0:12:30.09:0,30,343	0/0:25,0:25:66.15:0,66,747	0/0:29,0:29:78.22:0,78,891	0/1:7,1:8:3.11:3,0,218
chr10	98920265	.	G	GTTTGTT	3518.68	PASS	AB=0.629;AC=5;AF=0.089;AN=56;BaseQRankSum=9.455;DP=745;FS=0.000;HRun=0;HaplotypeScore=154.0575;InbreedingCoeff=0.3495;MQ=63.74;MQ0=1;MQRankSum=-6.435;QD=33.51;ReadPosRankSum=-1.684;VQSLOD=3.1174;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,117,2192	0/0:16,0:16:48.16:0,48,962	0/0:22,0:21:37.14:0,37,609	0/0:24,0:20:28.45:0,28,541	0/0:39,0:39:93.32:0,93,1965	0/0:16,0:16:45.12:0,45,863	0/0:21,0:21:45.15:0,45,905	0/1:4,0:28:38.49:670,0,38	0/0:23,0:23:69.23:0,69,1428	0/0:32,0:32:84.27:0,84,1705	0/0:16,0:16:45.14:0,45,835	0/0:37,0:37:93.30:0,93,1833	0/0:21,0:21:60.19:0,60,1197	0/0:24,0:24:63.21:0,63,1330	0/0:22,0:22:57.20:0,57,1185	1/1:6,27:32:44.03:1521,44,0	0/0:30,0:30:81.28:0,81,1707	0/0:23,0:23:57.13:0,57,1053	0/0:25,0:25:56.84:0,57,1014	0/0:40,0:40:99:0,102,1948	0/0:18,0:18:39.10:0,39,685	0/0:31,0:31:84.27:0,84,1670	0/0:16,0:16:39.13:0,39,804	0/0:41,0:41:99:0,105,2151	0/0:23,0:23:66.23:0,66,1338	0/1:4,0:35:99:1254,0,126	0/0:36,0:36:96.33:0,96,1948	0/1:7,0:9:15.89:73,0,16
chr10	98920431	.	CA	C	936.40	PASS	AB=0.896;AC=8;AF=0.143;AN=56;BaseQRankSum=6.718;DP=688;FS=1.502;HRun=12;HaplotypeScore=75.2134;InbreedingCoeff=0.6975;MQ=78.19;MQ0=0;MQRankSum=-2.856;QD=9.56;ReadPosRankSum=-0.233;VQSLOD=2.9425;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:37:67.18:0,67,821	0/1:8,1:9:2.20:2,0,162	0/0:20,0:19:25.12:0,25,233	0/0:26,0:25:27.67:0,28,258	0/0:32,4:37:43.51:0,44,777	0/0:17,1:18:23.04:0,23,385	0/0:20,1:21:21.83:0,22,390	1/1:8,24:32:68.65:529,69,0	0/0:23,1:24:39.85:0,40,565	0/0:28,0:29:71.98:0,72,715	0/0:21,0:22:50.89:0,51,490	0/0:21,1:22:13.68:0,14,287	0/0:14,1:15:18.79:0,19,351	0/0:24,1:25:56.99:0,57,518	0/0:33,2:35:54.83:0,55,698	0/0:21,2:23:7.63:0,8,441	0/0:33,1:34:60.91:0,61,787	0/0:25,2:28:10.82:0,11,457	0/1:21,3:25:6.77:7,0,461	0/0:27,2:29:19.61:0,20,547	0/0:23,1:24:30.85:0,31,487	0/0:17,1:18:18.83:0,19,359	0/0:17,0:20:47.70:0,48,430	0/0:21,3:24:33.84:0,34,508	0/0:25,2:29:19.33:0,19,530	1/1:7,22:30:45.33:491,45,0	0/0:26,0:30:77.74:0,78,727	1/1:0,2:2:5.98:46,6,0
chr10	98921557	.	G	GCATA	11173.01	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-13.165;DP=1087;FS=14.194;HRun=0;HaplotypeScore=179.2853;InbreedingCoeff=0.9994;MQ=63.38;MQ0=0;MQRankSum=-4.070;QD=55.31;ReadPosRankSum=-0.257;VQSLOD=5.1655;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:77.09:0,77,1148	0/0:11,0:11:24.08:0,24,420	0/0:30,0:27:49.69:0,50,755	0/0:29,0:24:39.31:0,39,531	0/0:33,0:33:93.27:0,93,1536	0/0:19,0:19:54.17:0,54,918	0/0:20,0:20:48.13:0,48,765	1/1:15,33:55:99:2353,120,0	0/0:52,0:52:99:0,144,2402	0/0:67,0:67:99:0,165,2752	0/0:25,0:25:63.20:0,63,1076	0/0:60,0:60:99:0,175,2961	0/0:51,0:51:99:0,132,2161	0/0:50,0:50:99:0,126,2068	0/0:76,0:76:99:0,198,3228	1/1:8,55:70:99:3824,151,0	0/0:27,0:27:55.04:0,55,975	0/0:36,0:35:82.63:0,83,1425	0/0:21,0:19:48.14:0,48,809	0/0:37,0:37:99:0,102,1635	0/0:55,0:55:99:0,115,2185	0/0:32,0:32:75.24:0,75,1286	0/0:29,0:29:81.28:0,81,1419	0/0:32,0:33:50.34:0,50,902	0/0:28,0:28:69.21:0,69,1154	1/1:3,52:56:99:3772,159,0	0/0:32,0:31:81.25:0,81,1359	1/1:3,16:19:48.16:1224,48,0
chr10	98921822	.	G	GCATA	5061.35	PASS	AB=0.544;AC=5;AF=0.089;AN=56;BaseQRankSum=-12.114;DP=959;FS=0.439;HRun=0;HaplotypeScore=155.8282;InbreedingCoeff=0.7969;MQ=67.95;MQ0=0;MQRankSum=-7.712;QD=43.63;ReadPosRankSum=-2.184;VQSLOD=4.7825;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:55:99:0,123,2082	0/0:14,0:14:39.12:0,39,635	0/0:30,0:29:54.43:0,54,809	0/0:22,0:22:46.87:0,47,755	0/0:43,0:43:99:0,102,1724	0/0:26,0:26:66.23:0,66,1106	0/0:19,0:19:36.97:0,37,612	1/1:25,29:58:99:2161,99,0	0/0:43,0:43:99:0,105,1729	0/0:40,0:40:99:0,99,1655	0/0:27,0:27:66.20:0,66,1068	0/0:43,0:43:99:0,102,1724	0/0:31,0:31:72.22:0,72,1168	0/0:41,0:41:87.12:0,87,1449	0/0:52,0:52:99:0,126,2048	0/0:45,0:45:99:0,108,1795	0/0:25,0:24:48.16:0,48,814	0/0:23,0:23:56.29:0,56,934	0/0:18,0:18:33.09:0,33,502	0/0:38,0:38:84.29:0,84,1418	0/0:34,0:34:75.23:0,75,1245	0/0:32,0:32:81.28:0,81,1374	0/0:30,0:30:63.18:0,63,1012	0/0:38,0:38:51.36:0,51,1379	0/0:39,0:39:84.29:0,84,1411	0/1:6,28:35:11.56:1853,0,12	0/0:34,0:34:90.25:0,90,1421	1/1:5,16:21:42.14:1048,42,0
chr10	98922963	.	T	TA	1179.59	PASS	AB=0.964;AC=6;AF=0.107;AN=56;BaseQRankSum=-8.227;DP=614;FS=9.432;HRun=9;HaplotypeScore=59.3888;InbreedingCoeff=0.7019;MQ=74.73;MQ0=1;MQRankSum=-0.390;QD=16.61;ReadPosRankSum=0.451;VQSLOD=3.0296;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,29:34:84.23:929,84,0	0/1:12,1:13:0.26:0,0,216	0/0:22,0:20:26.95:0,27,231	0/1:9,0:9:13.09:13,0,56	0/0:30,0:30:80.87:0,81,681	0/0:21,0:21:56.76:0,57,477	0/0:15,0:15:41.97:0,42,360	0/0:41,0:41:74.92:0,75,649	0/0:18,0:18:47.97:0,48,412	0/0:23,0:23:32.58:0,33,441	0/0:19,0:19:44.98:0,45,391	0/0:23,0:23:53.97:0,54,469	0/0:17,0:17:41.99:0,42,365	0/0:14,0:14:38.97:0,39,336	0/0:20,0:20:47.99:0,48,417	0/0:18,0:18:47.96:0,48,411	0/0:33,0:33:92.98:0,93,807	1/1:4,11:15:33.09:365,33,0	0/0:25,0:25:56.96:0,57,492	0/0:29,0:29:77.82:0,78,652	0/0:20,0:20:44.97:0,45,388	0/0:16,0:16:35.97:0,36,310	0/0:24,0:24:59.94:0,60,512	0/0:36,0:36:92.98:0,93,807	0/0:21,0:21:50.98:0,51,441	0/0:19,0:19:56.99:0,57,495	0/0:25,0:25:48.48:0,48,575	0/0:14,0:13:41.99:0,42,365
chr10	98924510	.	T	TA	1459.51	PASS	AB=0.963;AC=14;AF=0.250;AN=56;BaseQRankSum=2.969;DP=536;FS=0.000;HRun=11;HaplotypeScore=63.8901;InbreedingCoeff=0.8092;MQ=73.49;MQ0=0;MQRankSum=-1.520;QD=9.42;ReadPosRankSum=-1.828;VQSLOD=2.0826;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:33:41.94:628,42,0	0/0:14,0:14:35.84:0,36,274	0/1:8,0:8:6.67:7,0,30	0/0:17,0:18:6.29:0,6,98	0/0:26,0:26:44.65:0,45,340	0/0:25,2:27:29.27:0,29,405	0/0:15,0:17:39.89:0,40,285	1/1:12,1:29:52.70:286,53,0	0/0:15,0:15:23.62:0,24,168	0/0:14,0:14:32.86:0,33,254	0/0:23,0:23:47.29:0,47,368	0/0:20,0:22:57.86:0,58,430	0/0:16,0:16:32.82:0,33,251	0/0:13,0:14:28.91:0,29,212	0/0:15,0:16:40.89:0,41,308	1/1:2,0:17:31.25:157,31,0	0/0:23,2:25:7.09:0,7,400	1/1:3,11:14:33.02:323,33,0	0/1:23,2:25:4.21:4,0,326	0/0:19,0:19:41.80:0,42,325	0/0:15,0:15:41.81:0,42,322	0/0:13,0:13:32.70:0,33,243	0/0:21,0:22:48.31:0,48,355	0/0:17,0:17:41.81:0,42,321	0/0:17,1:19:11.39:0,11,274	1/1:8,0:18:29.56:156,30,0	0/0:28,0:29:67.66:0,68,509	1/1:2,0:11:17.04:86,17,0
chr10	98924956	.	CGT	C	2036.87	PASS	AB=0.904;AC=13;AF=0.232;AN=56;BaseQRankSum=9.549;DP=942;FS=2.348;HRun=0;HaplotypeScore=120.3736;InbreedingCoeff=0.0039;MQ=61.47;MQ0=3;MQRankSum=-0.155;QD=5.35;ReadPosRankSum=1.574;VQSLOD=3.1645;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,38:59:99:1220,113,0	0/0:11,0:11:27.07:0,27,399	0/0:33,0:19:5.99:0,6,69	0/0:47,0:27:9.03:0,9,136	0/0:29,2:31:3.05:0,3,577	0/1:18,2:20:27.85:28,0,516	0/0:38,2:39:2.71:0,3,890	0/0:32,0:32:32.89:0,33,462	0/1:32,6:38:99:127,0,897	0/0:42,3:47:16.44:0,16,1228	0/0:17,1:19:4.12:0,4,481	0/0:42,2:44:35.20:0,35,1379	0/0:25,0:25:29.43:0,29,892	0/1:32,3:36:17.69:18,0,1078	0/1:38,5:43:14.65:15,0,1150	0/0:13,0:44:55.54:0,56,497	0/1:28,2:30:24.83:25,0,563	1/1:6,23:30:50.98:574,51,0	0/1:19,3:23:74.01:74,0,449	0/0:21,1:23:1.85:0,2,552	0/0:81,3:85:17.90:0,18,2078	0/1:40,4:44:11.89:12,0,1142	0/0:14,0:14:30.09:0,30,448	0/0:30,1:31:9.46:0,9,819	0/0:26,1:27:7.18:0,7,551	0/1:27,3:29:56.87:57,0,493	0/1:25,2:27:47.71:48,0,694	0/0:8,0:8:15.03:0,15,195
chr10	98925278	.	CGT	C	539.33	PASS	AB=0.894;AC=12;AF=0.222;AN=54;BaseQRankSum=9.082;DP=925;FS=1.045;HRun=0;HaplotypeScore=112.3605;InbreedingCoeff=-0.1322;MQ=52.28;MQ0=43;MQRankSum=0.260;QD=1.35;ReadPosRankSum=1.519;VQSLOD=1.7209;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:45:2.93:0,3,23	0/0:16,0:16:2.59:0,3,319	./.	0/0:39,0:4:6.02:0,6,85	0/1:20,1:20:23.84:24,0,203	0/0:15,0:15:21.06:0,21,296	0/1:34,3:36:44.52:45,0,639	0/0:24,0:17:6.68:0,7,49	0/1:29,6:36:99:120,0,557	0/0:45,0:43:5.55:0,6,607	0/0:17,0:16:27.08:0,27,390	0/0:38,0:38:62.53:0,63,860	0/1:26,6:31:81.14:81,0,506	0/0:49,5:55:20.51:0,21,1192	0/1:48,7:57:99:109,0,998	1/1:15,0:25:29.65:143,30,0	0/1:28,2:30:22.46:22,0,483	0/0:11,0:12:0.83:0,1,111	0/0:29,0:22:12.90:0,13,310	0/0:24,0:22:39.07:0,39,508	0/1:80,3:80:22.67:23,0,1066	0/0:32,3:35:20.02:0,20,594	0/1:23,0:23:0.35:0,0,315	0/0:43,1:45:34.72:0,35,1190	0/1:25,4:28:19.56:20,0,473	0/0:33,0:43:49.55:0,50,601	0/1:18,5:23:98.11:98,0,452	0/0:3,0:5:8.99:0,9,76
chr10	98925395	.	ATG	A	1723.01	PASS	AB=0.888;AC=25;AF=0.463;AN=54;BaseQRankSum=8.640;DP=958;FS=0.496;HRun=0;HaplotypeScore=114.0493;InbreedingCoeff=0.1906;MQ=59.86;MQ0=10;MQRankSum=-0.158;QD=2.93;ReadPosRankSum=3.207;VQSLOD=2.0286;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:53,5:57:3.91:167,0,4	0/0:10,0:10:11.99:0,12,118	./.	0/0:45,0:30:5.34:0,5,28	0/0:24,0:24:35.40:0,35,412	0/1:23,0:24:4.54:5,0,317	0/1:35,5:40:59.57:60,0,463	1/1:24,0:23:2.57:22,3,0	0/1:27,4:31:0.09:0,0,391	0/0:50,0:50:20.10:0,20,390	0/1:19,1:20:15.91:16,0,146	0/0:42,4:45:32.90:0,33,759	0/1:27,0:27:3.38:3,0,187	0/1:32,2:34:39.24:39,0,261	0/0:56,1:58:9.58:0,10,986	0/1:25,20:47:12.36:285,0,12	1/1:18,16:36:41.78:426,42,0	0/1:16,8:24:88.02:138,0,88	1/1:14,0:12:3:26,3,0	1/1:15,9:25:14.87:147,15,0	1/1:70,23:95:30.21:294,30,0	0/1:30,0:30:5.64:6,0,107	0/0:24,0:24:23.05:0,23,256	0/0:45,4:47:11.88:0,12,523	0/0:32,0:32:30.01:0,30,328	1/1:16,8:23:9.42:90,9,0	0/1:18,6:24:30.14:118,0,30	1/1:8,0:9:8.79:55,9,0
chr10	98925598	.	TTG	T	518.70	PASS	AB=0.926;AC=14;AF=0.259;AN=54;BaseQRankSum=4.332;DP=890;FS=13.874;HRun=0;HaplotypeScore=151.5935;InbreedingCoeff=0.0204;MQ=56.60;MQ0=14;MQRankSum=0.029;QD=1.23;ReadPosRankSum=0.217;VQSLOD=1.8388;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:40:13.01:0,13,94	0/0:9,0:18:4.96:0,5,19	./.	0/0:35,0:20:0:0,0,0	0/1:24,0:22:24.80:25,0,121	0/1:24,4:28:33.43:33,0,330	0/1:43,1:43:7.44:7,0,604	0/0:36,0:32:16.98:0,17,164	0/0:29,0:30:33.97:0,34,601	1/1:33,9:42:15.07:230,15,0	1/1:10,1:11:6.02:64,6,0	0/1:47,3:50:41.74:42,0,600	0/1:30,3:32:21.23:21,0,474	0/1:38,5:43:21.13:21,0,466	0/1:41,1:43:3.92:4,0,357	0/0:45,0:43:7.91:0,8,122	0/0:36,0:36:43:0,43,774	0/0:20,0:20:26.72:0,27,202	0/0:18,0:17:11.99:0,12,136	0/1:21,1:22:0.10:0,0,370	0/1:52,3:55:84.44:84,0,510	0/0:22,0:22:27.06:0,27,372	0/0:22,0:21:27.04:0,27,361	0/0:52,0:50:54.14:0,54,752	0/1:18,8:25:99:135,0,162	0/0:30,1:30:8.67:0,9,367	0/0:24,0:24:33.04:0,33,408	0/0:6,0:9:5.66:0,6,130
chr10	98925965	.	T	TC	427.83	PASS	AB=1.000;AC=3;AF=0.056;AN=54;BaseQRankSum=5.646;DP=382;FS=0.966;HRun=8;HaplotypeScore=47.4937;InbreedingCoeff=0.5144;MQ=78.03;MQ0=3;MQRankSum=-0.500;QD=13.37;ReadPosRankSum=0.716;VQSLOD=2.7235;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:41.99:0,42,378	0/0:3,0:3:9:0,9,82	0/0:14,0:12:24.93:0,25,198	0/0:27,0:18:32.33:0,32,249	0/0:7,0:6:12:0,12,110	0/0:9,0:9:24.01:0,24,220	0/0:21,0:21:47.99:0,48,439	0/1:14,0:14:10.70:11,0,95	0/0:22,0:22:47.97:0,48,429	0/0:7,0:7:9:0,9,81	0/0:5,0:4:3:0,3,27	0/0:17,0:17:41.99:0,42,379	0/0:12,0:12:32.38:0,32,282	0/0:23,0:23:56.24:0,56,500	0/0:18,0:18:48.01:0,48,439	1/1:1,17:18:45.13:519,45,0	0/0:22,0:22:57.01:0,57,516	0/0:17,0:17:48.02:0,48,439	0/0:13,0:13:35.96:0,36,319	./.	0/0:17,0:17:51.01:0,51,462	0/0:7,0:7:15:0,15,137	0/0:6,0:6:14.99:0,15,133	0/0:17,0:17:42.01:0,42,384	0/0:10,0:10:17.99:0,18,163	0/0:10,0:10:27.01:0,27,243	0/0:18,0:18:45.01:0,45,411	0/0:8,0:8:15.01:0,15,137
chr10	98926187	.	ATATTTATT	A	412.31	PASS	AB=0.696;AC=5;AF=0.227;AN=22;BaseQRankSum=2.679;DP=192;FS=0.000;HRun=0;HaplotypeScore=49.3235;InbreedingCoeff=0.2839;MQ=79.11;MQ0=2;MQRankSum=-1.833;QD=6.54;ReadPosRankSum=0.141;VQSLOD=1.3652;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:7:5.92:0,6,40	0/0:5,0:5:6.02:0,6,178	./.	./.	./.	0/0:7,0:7:6.02:0,6,243	./.	0/0:34,0:33:0.89:0,1,2	./.	0/0:4,0:4:3.01:0,3,122	./.	./.	./.	./.	0/0:3,0:3:3.01:0,3,86	./.	1/1:14,7:21:10.68:292,11,0	0/1:9,7:16:45.26:138,0,45	1/1:24,2:25:3.01:74,3,0	./.	0/0:4,0:4:3.01:0,3,122	./.	./.	./.	./.	./.	0/0:10,0:10:9.03:0,9,365	./.
chr10	98927403	.	C	CT	919.58	PASS	AB=0.992;AC=7;AF=0.125;AN=56;BaseQRankSum=9.592;DP=518;FS=1.828;HRun=8;HaplotypeScore=69.5182;InbreedingCoeff=0.5558;MQ=80.60;MQ0=4;MQRankSum=-2.354;QD=7.18;ReadPosRankSum=0.555;VQSLOD=0.9622;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,23:31:69.73:710,70,0	0/0:6,0:6:14.97:0,15,127	0/1:40,0:29:0.02:0,0,183	0/1:27,0:18:16.24:16,0,24	0/0:20,0:20:44.83:0,45,373	0/0:16,0:16:35.97:0,36,314	0/0:17,0:17:41.94:0,42,364	0/0:24,0:24:41.99:0,42,379	0/0:27,0:27:65.99:0,66,591	0/0:20,0:20:44.31:0,44,370	0/0:17,0:17:26.52:0,27,219	0/0:19,0:19:48.84:0,49,420	0/0:8,0:8:17.98:0,18,155	0/0:21,0:21:44.03:0,44,383	0/0:21,0:21:38.81:0,39,324	0/1:16,0:16:37.27:50,0,37	0/0:24,0:24:62.96:0,63,561	1/1:5,7:12:30:279,30,0	0/0:13,0:13:32.47:0,32,286	0/0:16,0:16:41.94:0,42,355	0/0:14,0:14:39.01:0,39,353	0/0:15,0:15:16.52:0,17,179	0/0:9,0:9:14.97:0,15,132	0/0:19,0:19:50.81:0,51,452	0/0:17,0:17:29.75:0,30,283	0/0:14,0:14:33.01:0,33,297	0/0:22,0:21:44.47:0,44,380	0/0:11,0:11:25.89:0,26,191
chr10	98927411	.	T	TG	625.79	PASS	AB=0.952;AC=9;AF=0.161;AN=56;BaseQRankSum=5.277;DP=533;FS=1.135;HRun=10;HaplotypeScore=76.3814;InbreedingCoeff=0.6016;MQ=80.73;MQ0=4;MQRankSum=-1.205;QD=4.74;ReadPosRankSum=1.620;VQSLOD=1.0505;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:61.38:285,61,0	0/0:7,0:7:11.93:0,12,93	0/1:43,0:30:34.63:35,0,157	0/0:26,0:19:5.14:0,5,24	0/0:21,0:22:40.89:0,41,314	0/0:18,0:18:35.87:0,36,285	0/0:16,0:16:35.85:0,36,285	0/0:22,1:23:41.96:0,42,397	0/0:25,0:25:40.97:0,41,488	0/0:21,0:21:41.84:0,42,329	0/0:18,0:18:29.83:0,30,228	0/0:18,0:18:35.24:0,35,278	0/0:6,0:6:11.94:0,12,94	0/0:19,0:19:44.80:0,45,354	0/0:18,0:19:25.99:0,26,202	1/1:6,12:18:23.35:336,23,0	0/0:25,0:25:59.89:0,60,485	1/1:12,0:12:22.32:102,22,0	0/0:16,0:16:32.75:0,33,244	0/0:18,0:18:32.90:0,33,261	0/0:14,0:14:38.55:0,39,305	0/1:10,2:12:1.75:2,0,179	0/0:10,0:10:17.92:0,18,140	0/0:24,0:24:68.77:0,69,542	0/1:15,0:16:19.69:20,0,106	0/0:18,0:18:29.87:0,30,279	0/0:24,0:23:35.71:0,36,425	0/0:12,0:12:14.93:0,15,116
chr10	98927415	.	G	GGGT	1849.41	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.714;DP=519;FS=10.183;HRun=0;HaplotypeScore=88.6285;InbreedingCoeff=0.9291;MQ=78.37;MQ0=4;MQRankSum=-2.974;QD=43.01;ReadPosRankSum=2.337;VQSLOD=5.1754;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:31:75.55:1439,76,0	0/0:7,0:7:15.04:0,15,223	0/0:36,0:24:42.11:0,42,670	0/0:26,0:17:5.69:0,6,114	0/0:23,0:23:65.96:0,66,861	0/0:21,0:21:60.08:0,60,795	0/0:17,0:17:42.11:0,42,643	0/0:24,0:24:54.18:0,54,873	0/0:27,0:27:64.45:0,64,1064	0/0:20,0:20:51.14:0,51,773	0/0:15,0:15:35.13:0,35,496	0/0:18,0:18:48.87:0,49,683	0/0:7,0:7:18.04:0,18,238	0/0:19,0:19:54.15:0,54,821	0/0:13,0:13:39.08:0,39,528	0/0:18,0:18:48.79:0,49,325	0/0:25,0:25:66.20:0,66,1043	1/1:5,7:12:32.72:532,33,0	0/0:15,0:15:39.09:0,39,572	0/0:18,0:18:48.11:0,48,693	0/0:17,0:17:48.11:0,48,694	0/0:13,0:13:29.89:0,30,457	0/0:10,0:10:24.06:0,24,347	0/0:25,0:25:72.24:0,72,1163	0/0:13,0:13:38.86:0,39,454	0/0:19,0:19:47.59:0,48,695	0/0:23,0:22:61.08:0,61,961	0/0:7,0:7:18.05:0,18,274
chr10	98927676	.	C	CTG	3973.29	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.649;DP=806;FS=0.894;HRun=0;HaplotypeScore=93.3042;InbreedingCoeff=0.9889;MQ=69.53;MQ0=3;MQRankSum=-2.994;QD=40.13;ReadPosRankSum=2.713;VQSLOD=5.7507;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,36:39:84.29:1426,84,0	0/0:5,0:5:12.03:0,12,142	0/0:41,0:31:72.19:0,72,888	0/0:43,0:37:86.98:0,87,1107	0/0:27,0:27:66.11:0,66,819	0/0:19,0:19:51.17:0,51,662	0/0:33,0:33:87.25:0,87,1098	0/0:28,0:28:75.23:0,75,948	0/0:16,0:16:48.16:0,48,623	0/0:32,0:32:78.22:0,78,956	0/0:26,0:26:72.23:0,72,933	0/0:33,0:33:90.28:0,90,1150	0/0:28,0:28:78.21:0,78,981	0/0:34,0:34:90.26:0,90,1139	0/0:20,0:20:51.17:0,51,663	1/1:1,25:26:57.20:967,57,0	0/0:12,0:12:30.10:0,30,389	1/1:6,28:34:98.91:1580,99,0	0/0:31,0:29:84.04:0,84,1007	0/0:21,0:21:54.17:0,54,701	0/0:78,0:78:99:0,202,2557	0/0:17,0:17:45.15:0,45,581	0/0:20,0:20:57.13:0,57,692	0/0:36,0:36:87.28:0,87,1130	0/0:22,0:22:63.20:0,63,818	0/0:39,0:39:97.88:0,98,1294	0/0:27,0:27:66.21:0,66,856	0/0:19,0:19:48.05:0,48,544
chr10	98927841	.	T	TAC	1082.09	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.300;DP=665;FS=0.000;HRun=0;HaplotypeScore=83.9131;InbreedingCoeff=0.9893;MQ=80.79;MQ0=0;MQRankSum=-5.384;QD=47.05;ReadPosRankSum=-0.527;VQSLOD=4.3458;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,1778	0/0:8,0:8:24.08:0,24,353	0/0:24,0:24:69.23:0,69,985	0/0:17,0:17:42.10:0,42,589	0/0:31,0:31:87.28:0,87,1262	0/0:20,0:19:57.19:0,57,837	0/0:21,0:21:57.19:0,57,838	0/0:34,0:34:93.30:0,93,1349	0/0:16,0:16:48.16:0,48,703	0/0:27,0:27:78.26:0,78,1148	0/0:7,0:7:18.06:0,18,265	0/0:24,0:24:69.23:0,69,1015	0/0:21,0:21:60.20:0,60,875	0/0:24,0:24:69.22:0,69,993	0/0:29,0:29:87.25:0,87,1257	1/1:2,21:23:63.22:1177,63,0	0/0:27,0:27:81.23:0,81,1166	0/0:34,0:34:96.30:0,96,1385	0/0:22,0:22:63.21:0,63,928	0/0:17,0:17:48.16:0,48,703	0/0:36,0:36:99:0,102,1500	0/0:18,0:18:54.18:0,54,795	0/0:11,0:11:30.10:0,30,442	0/0:26,0:26:78.25:0,78,1129	0/0:23,0:23:69.23:0,69,1016	0/0:34,0:34:99:0,99,1458	0/0:36,0:35:99:0,102,1499	0/0:11,0:11:33.08:0,33,464
chr10	98927858	.	CA	C	581.81	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.300;DP=658;FS=3.063;HRun=3;HaplotypeScore=70.8766;InbreedingCoeff=0.9943;MQ=82.24;MQ0=0;MQRankSum=-5.931;QD=29.09;ReadPosRankSum=-1.173;VQSLOD=2.6949;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,1990	0/0:11,0:11:30.09:0,30,416	0/0:27,0:27:66.63:0,67,864	0/0:25,0:25:70.97:0,71,928	0/0:31,0:31:87.29:0,87,1251	0/0:21,0:20:60.17:0,60,827	0/0:26,0:26:78.26:0,78,1123	0/0:30,0:30:90.30:0,90,1296	0/0:14,0:14:39.13:0,39,561	0/0:24,0:24:69.22:0,69,962	0/0:7,0:7:21.07:0,21,302	0/0:25,0:25:75.25:0,75,1078	0/0:19,0:19:57.17:0,57,800	0/0:23,0:23:69.22:0,69,975	0/0:25,0:25:75.24:0,75,1064	1/1:8,11:20:57.64:677,58,0	0/0:21,0:21:63.21:0,63,907	0/0:33,0:33:90.29:0,90,1275	0/0:23,0:23:60.20:0,60,863	0/0:13,0:13:39.12:0,39,544	0/0:32,0:32:96.31:0,96,1361	0/0:18,0:18:54.17:0,54,760	0/0:15,0:15:45.14:0,45,624	0/0:28,0:28:84.24:0,84,1186	0/0:23,0:23:66.22:0,66,951	0/0:27,0:27:81.27:0,81,1167	0/0:39,0:38:99:0,114,1623	0/0:9,0:9:27.09:0,27,389
chr10	98928163	.	C	CG	1559.78	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.953;DP=545;FS=21.158;HRun=6;HaplotypeScore=58.4233;InbreedingCoeff=0.7667;MQ=82.67;MQ0=0;MQRankSum=-1.936;QD=26.00;ReadPosRankSum=0.091;VQSLOD=1.8596;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,33:38:75.20:926,75,0	0/0:10,0:10:21.04:0,21,213	0/0:16,0:16:31.25:0,31,278	0/0:19,0:19:9.85:0,10,270	0/0:22,1:23:40.81:0,41,432	0/0:20,0:20:36.96:0,37,369	0/0:21,0:21:36.05:0,36,354	0/0:22,0:22:19.12:0,19,287	0/0:11,0:11:27.04:0,27,268	0/0:24,0:24:34.02:0,34,397	0/0:14,2:16:2.09:0,2,161	0/0:9,0:9:5.11:0,5,195	0/0:21,0:21:51.11:0,51,520	0/0:17,0:17:35.64:0,36,337	0/0:21,0:21:48.04:0,48,467	0/0:26,0:26:66.02:0,66,654	0/0:21,0:21:57.10:0,57,568	1/1:1,21:22:60.19:755,60,0	0/0:16,1:17:38.71:0,39,368	0/0:25,0:25:29.37:0,29,489	0/0:28,0:28:28.13:0,28,453	0/0:14,0:14:27.96:0,28,302	0/0:14,0:14:3.23:0,3,221	0/0:21,0:21:63.08:0,63,620	0/0:18,0:18:42.06:0,42,410	0/0:24,0:24:56.15:0,56,552	0/0:21,0:21:54.11:0,54,550	0/0:6,0:6:18.04:0,18,183
chr10	98930547	.	GA	G	2464.53	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.490;DP=769;FS=0.000;HRun=8;HaplotypeScore=77.5355;InbreedingCoeff=0.9992;MQ=79.76;MQ0=0;MQRankSum=-1.984;QD=24.65;ReadPosRankSum=2.798;VQSLOD=4.3105;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,48:49:99:1333,138,0	0/0:12,0:12:36.11:0,36,434	0/0:28,0:28:64.92:0,65,776	0/0:31,0:29:45.79:0,46,712	0/0:32,0:32:78.23:0,78,926	0/0:33,0:33:90.28:0,90,1087	0/0:22,0:22:66.20:0,66,797	0/0:33,0:33:84.25:0,84,1002	0/0:31,0:31:81.25:0,81,978	0/0:34,0:34:93.28:0,93,1121	0/0:19,0:19:48.14:0,48,570	0/0:28,0:28:72.22:0,72,869	0/0:38,0:38:99:0,102,1212	0/0:29,0:29:78.23:0,78,928	0/0:23,0:23:69.18:0,69,801	1/1:1,20:21:56.93:550,57,0	0/0:39,0:39:99:0,105,1266	1/1:3,27:30:75.11:724,75,0	0/0:14,0:14:39.12:0,39,470	0/0:24,0:24:66.20:0,66,791	0/0:39,0:39:99:0,105,1267	0/0:27,0:27:75.23:0,75,905	0/0:18,0:18:39.12:0,39,469	0/0:22,0:22:60.18:0,60,725	0/0:22,0:22:63.19:0,63,761	0/0:32,0:32:90.26:0,90,1070	0/0:28,0:28:75.23:0,75,904	0/0:11,0:11:24.07:0,24,290
chr10	98932048	.	A	ATG	639.35	PASS	AB=0.618;AC=5;AF=0.089;AN=56;BaseQRankSum=6.422;DP=726;FS=37.454;HRun=0;HaplotypeScore=104.6586;InbreedingCoeff=0.7035;MQ=69.94;MQ0=20;MQRankSum=-0.433;QD=6.21;ReadPosRankSum=-5.248;VQSLOD=-0.0545;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,3:40:4.28:222,4,0	0/0:9,0:9:23.98:0,24,310	0/0:33,0:23:56.84:0,57,757	0/0:30,0:16:39.86:0,40,455	0/0:19,0:19:51.14:0,51,702	0/0:18,0:17:39.03:0,39,556	0/0:32,0:32:90.20:0,90,1290	0/0:26,0:24:40.91:0,41,796	0/0:20,0:20:56:0,56,808	0/0:17,0:17:47.99:0,48,683	0/0:18,0:17:42.07:0,42,572	0/0:33,0:32:86.87:0,87,1213	0/0:38,0:38:96.29:0,96,1361	0/0:36,0:35:93.31:0,93,1370	0/0:24,0:24:64.85:0,65,894	0/1:13,20:34:50.22:117,0,50	0/0:31,0:31:24.79:0,25,922	1/1:23,6:29:28.09:420,28,0	0/0:26,0:25:66.20:0,66,946	0/0:22,0:22:50.56:0,51,788	0/0:36,0:34:80.34:0,80,1136	0/0:18,0:18:43.96:0,44,627	0/0:14,0:13:30.10:0,30,448	0/0:35,0:34:81.24:0,81,1166	0/0:21,0:21:54.18:0,54,801	0/0:30,0:27:63.05:0,63,827	0/0:27,0:27:78.21:0,78,1091	0/0:10,0:10:23.43:0,23,286
chr10	98932677	.	GACAA	G	1173.55	PASS	AB=0.930;AC=4;AF=0.071;AN=56;BaseQRankSum=8.186;DP=736;FS=0.000;HRun=0;HaplotypeScore=114.9004;InbreedingCoeff=0.3839;MQ=64.74;MQ0=0;MQRankSum=-0.731;QD=16.08;ReadPosRankSum=1.203;VQSLOD=3.1536;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:96.31:0,96,2271	0/0:6,0:6:12.04:0,12,289	0/0:26,0:20:21.07:0,21,490	0/0:18,0:17:30.05:0,30,657	0/0:32,0:32:72.25:0,72,1720	0/0:26,0:26:60.21:0,60,1370	0/0:25,0:25:51.16:0,51,1152	0/0:31,0:31:36.12:0,36,808	0/0:30,0:30:66.23:0,66,1596	0/0:28,0:28:60.21:0,60,1440	0/0:22,0:22:45.14:0,45,1002	0/0:29,0:29:69.23:0,69,1624	0/0:34,0:34:87.30:0,87,2108	0/0:33,0:33:78.27:0,78,1890	0/0:42,0:42:90.31:0,90,2115	1/1:8,26:34:75.26:1216,75,0	0/0:34,0:34:70.12:0,70,1626	0/0:34,0:34:78.23:0,78,1779	0/1:22,2:24:58.17:58,0,697	0/0:23,0:23:2.05:0,2,985	0/0:21,0:21:45.15:0,45,1044	0/0:26,0:26:60.21:0,60,1432	0/0:12,0:12:24.08:0,24,581	0/1:14,1:15:12.53:13,0,763	0/0:29,0:29:69.22:0,69,1602	0/0:31,0:31:66.23:0,66,1596	0/0:28,0:28:48.16:0,48,1162	0/0:3,0:3:6.02:0,6,145
chr10	98934598	.	AGTGTGTGTGTGAGT	A	719.79	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.316;DP=749;FS=4.344;HRun=0;HaplotypeScore=226.9910;InbreedingCoeff=0.9081;MQ=49.58;MQ0=43;MQRankSum=-4.654;QD=10.14;ReadPosRankSum=0.741;VQSLOD=2.4452;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,34:39:9.03:209,9,0	0/0:17,0:17:40.77:0,41,1753	0/0:25,0:6:18.06:0,18,839	0/0:39,0:19:47.54:0,48,2359	0/0:21,0:20:57.20:0,57,2742	0/0:27,0:24:55.90:0,56,2586	0/0:36,0:35:87.22:0,87,3720	0/0:44,0:43:99:0,111,4220	0/0:31,0:29:72.22:0,72,3366	0/0:36,0:35:99:0,99,4984	0/0:14,0:13:15.05:0,15,648	0/0:37,0:33:72.20:0,72,3333	0/0:32,0:32:87.80:0,88,3897	0/0:25,0:23:60.21:0,60,2824	0/0:29,0:29:66.23:0,66,3237	1/1:5,0:19:14.98:455,15,0	0/0:24,0:23:57.14:0,57,2513	1/1:1,1:6:6.02:182,6,0	0/0:20,0:16:47.94:0,48,1800	0/0:17,0:16:38.73:0,39,1668	0/0:45,0:42:98.75:0,99,4506	0/0:28,0:26:59.86:0,60,2801	0/0:18,0:18:48.16:0,48,2265	0/0:34,0:32:81.04:0,81,3737	0/0:15,0:13:30.10:0,30,1441	0/0:29,0:26:71.94:0,72,3209	0/0:15,0:14:33.02:0,33,1394	0/0:20,0:14:10.15:0,10,1290
chr10	98935881	.	AAATG	A	2659.05	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.894;DP=794;FS=1.677;HRun=0;HaplotypeScore=122.4082;InbreedingCoeff=0.9819;MQ=69.27;MQ0=2;MQRankSum=-2.628;QD=23.53;ReadPosRankSum=1.845;VQSLOD=3.5789;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,33:48:75.26:1208,75,0	0/0:9,0:9:24.08:0,24,559	0/0:16,0:15:12.04:0,12,290	0/0:25,0:21:18.03:0,18,384	0/0:31,0:31:54.18:0,54,1226	0/0:20,0:20:33.10:0,33,748	0/0:30,0:30:51.18:0,51,1227	0/0:34,0:34:54.19:0,54,1282	0/0:31,0:31:69.22:0,69,1616	0/0:28,0:27:69.24:0,69,1646	0/0:29,0:29:57.20:0,57,1368	0/0:31,0:31:69.24:0,69,1629	0/0:38,1:39:39.57:0,40,1911	0/0:33,0:33:72.25:0,72,1730	0/0:35,0:35:69.24:0,69,1641	1/1:12,28:40:69.24:1111,69,0	0/0:38,1:39:29.91:0,30,1613	1/1:11,13:24:30.10:483,30,0	0/0:16,0:16:18.06:0,18,434	0/0:24,0:24:63.22:0,63,1487	0/0:40,0:40:96.30:0,96,2209	0/0:24,0:24:45.15:0,45,1062	0/0:26,0:26:66.21:0,66,1516	0/0:21,0:21:42.13:0,42,956	0/0:33,0:33:78.27:0,78,1852	0/0:34,0:34:66.22:0,66,1543	0/0:21,0:20:36.12:0,36,865	0/0:12,0:12:27.09:0,27,651
chr10	98936259	.	AT	A	3388.64	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=13.570;DP=690;FS=2.479;HRun=2;HaplotypeScore=68.7503;InbreedingCoeff=0.9971;MQ=81.75;MQ0=0;MQRankSum=-3.413;QD=37.24;ReadPosRankSum=1.237;VQSLOD=4.3793;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:99:1441,111,0	0/0:6,0:6:18.06:0,18,270	0/0:21,0:21:40.67:0,41,796	0/0:18,0:18:54.13:0,54,729	0/0:21,0:21:63.21:0,63,937	0/0:32,0:32:96.31:0,96,1417	0/0:31,0:31:87.29:0,87,1303	0/0:29,0:29:84.23:0,84,1200	0/0:16,0:16:48.15:0,48,698	0/0:32,0:32:96.32:0,96,1424	0/0:31,0:31:93.29:0,93,1336	0/0:25,0:25:75.25:0,75,1123	0/0:20,0:20:54.18:0,54,809	0/0:21,0:21:63.21:0,63,944	0/0:33,0:33:99:0,99,1447	1/1:0,21:21:60.20:779,60,0	0/0:22,0:22:63.21:0,63,941	1/1:0,31:31:90.29:1169,90,0	0/0:24,0:24:66.21:0,66,970	0/0:24,0:24:72.24:0,72,1079	0/0:18,0:18:54.17:0,54,784	0/0:28,0:28:84.24:0,84,1216	0/0:23,0:23:69.21:0,69,995	0/0:21,0:21:63.20:0,63,920	0/0:32,0:32:96.31:0,96,1404	0/0:27,0:27:78.26:0,78,1169	0/0:27,0:26:81.27:0,81,1199	0/0:17,0:17:51.15:0,51,734
chr10	98940825	.	GACAAA	G	2118.64	PASS	AB=0.826;AC=6;AF=0.107;AN=56;BaseQRankSum=8.880;DP=765;FS=1.214;HRun=0;HaplotypeScore=142.4626;InbreedingCoeff=0.5906;MQ=72.35;MQ0=3;MQRankSum=-0.515;QD=22.54;ReadPosRankSum=2.416;VQSLOD=3.5188;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,19:30:51.17:948,51,0	0/1:14,1:15:16.66:17,0,874	0/0:31,0:26:20.45:0,20,368	0/0:43,0:34:60.16:0,60,987	0/0:33,0:33:54.17:0,54,1453	0/0:18,0:18:39.10:0,39,993	0/0:24,0:24:42.12:0,42,1055	0/0:37,0:37:66.17:0,66,1536	0/0:23,0:23:1.68:0,2,1337	0/0:36,0:36:22.40:0,22,2099	0/0:19,0:19:36.11:0,36,965	0/0:31,0:31:75.21:0,75,1945	0/0:25,0:25:57.18:0,57,1532	0/0:30,1:31:16.43:0,16,1711	0/0:30,0:30:63.20:0,63,1739	1/1:8,21:29:45.15:837,45,0	0/0:27,0:27:54.12:0,54,1331	0/1:12,8:20:10.55:453,0,11	0/0:22,0:22:42.12:0,42,1096	0/0:20,0:20:39.12:0,39,1052	0/0:35,0:35:93.28:0,93,2459	0/0:21,0:21:36.12:0,36,1006	0/0:18,0:18:36.12:0,36,1027	0/0:35,0:35:69.22:0,69,1866	0/0:22,0:22:39.13:0,39,1099	0/0:34,1:35:25.46:0,25,2058	0/0:45,0:43:99:0,111,3097	0/0:10,0:10:18.06:0,18,512
chr10	98944546	.	C	CA	1962.12	PASS	AB=0.962;AC=7;AF=0.125;AN=56;BaseQRankSum=-5.312;DP=616;FS=9.905;HRun=10;HaplotypeScore=70.6473;InbreedingCoeff=0.8384;MQ=64.50;MQ0=2;MQRankSum=-0.379;QD=16.08;ReadPosRankSum=1.049;VQSLOD=3.5591;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:34:60.15:638,60,0	0/0:11,0:11:26.96:0,27,221	0/0:21,0:12:18.36:0,18,134	0/0:15,0:10:10.52:0,11,82	0/0:20,3:24:16.42:0,16,323	0/0:23,0:23:62.90:0,63,514	0/0:18,1:19:10.26:0,10,288	0/0:26,0:26:52.14:0,52,419	0/0:22,0:23:53.77:0,54,443	0/0:21,0:21:56.92:0,57,465	0/0:17,0:17:32.76:0,33,266	0/0:21,0:21:50.91:0,51,418	0/0:20,0:20:44.94:0,45,369	0/0:20,0:21:46.84:0,47,374	0/0:21,0:21:44.95:0,45,369	1/1:6,20:27:53.67:540,54,0	0/0:29,0:30:81.97:0,82,652	1/1:1,34:36:89.89:924,90,0	0/0:25,1:26:30.91:0,31,459	0/0:16,0:16:44.94:0,45,367	0/0:19,1:19:12.92:0,13,313	0/0:17,0:18:27.30:0,27,328	0/0:16,0:16:41.93:0,42,344	0/0:17,0:17:41.93:0,42,345	0/0:25,0:25:68.79:0,69,552	0/1:24,1:25:4.30:4,0,332	0/0:26,0:28:76.84:0,77,621	0/0:12,0:12:29.95:0,30,246
chr10	98948670	.	C	CAAA	534.92	PASS	AB=1.000;AC=7;AF=0.152;AN=46;BaseQRankSum=1.253;DP=264;FS=8.093;HRun=8;HaplotypeScore=32.4909;InbreedingCoeff=0.5766;MQ=53.95;MQ0=13;MQRankSum=-2.469;QD=16.21;ReadPosRankSum=-1.674;VQSLOD=-0.6293;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,4:6:12.04:199,12,0	./.	./.	0/1:7,0:3:6.93:7,0,18	0/0:12,0:11:18.06:0,18,237	0/0:17,0:17:36.11:0,36,458	0/0:4,0:3:2.99:0,3,39	0/0:29,0:22:51.14:0,51,659	0/0:9,0:9:10.98:0,11,156	0/0:6,0:5:12.02:0,12,153	0/0:9,0:9:11.79:0,12,157	0/0:4,0:4:6.01:0,6,79	0/0:3,0:3:3.01:0,3,39	0/0:2,0:2:3.01:0,3,39	0/0:7,0:6:9.03:0,9,118	1/1:6,0:6:9.03:181,9,0	0/0:33,0:34:81.11:0,81,979	1/1:2,8:11:15.05:275,15,0	0/0:24,0:21:54.16:0,54,707	./.	0/0:8,0:7:21.07:0,21,273	./.	./.	0/0:11,0:11:12:0,12,158	0/0:11,0:11:18.05:0,18,237	0/0:6,0:6:18.06:0,18,236	0/0:5,0:5:6:0,6,63	0/0:8,0:7:9.03:0,9,116
chr10	98948895	.	T	TA	1560.77	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-5.516;DP=543;FS=3.464;HRun=8;HaplotypeScore=58.8585;InbreedingCoeff=0.9361;MQ=64.91;MQ0=7;MQRankSum=-0.200;QD=25.17;ReadPosRankSum=-0.305;VQSLOD=4.3246;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,24:31:62.70:932,63,0	0/0:4,0:4:12.01:0,12,110	0/0:30,0:17:9.29:0,9,231	0/0:26,0:15:15.83:0,16,176	0/0:19,0:19:45.02:0,45,412	0/0:21,0:21:57.03:0,57,521	0/0:27,0:27:59.89:0,60,538	0/0:32,0:32:69:0,69,624	0/0:20,0:20:48.02:0,48,439	0/0:8,0:8:21.01:0,21,192	0/0:16,0:16:38.99:0,39,348	0/0:21,0:21:57.02:0,57,521	0/0:17,0:17:32.99:0,33,302	0/0:17,0:17:42.02:0,42,384	0/0:20,0:20:48.01:0,48,433	1/1:0,12:12:30.09:346,30,0	0/0:38,0:38:92:0,92,877	1/1:4,14:18:14.66:423,15,0	0/0:16,0:15:30:0,30,273	0/0:9,0:9:27.01:0,27,247	0/0:10,0:10:21:0,21,192	0/0:11,0:11:30.01:0,30,275	0/0:4,0:4:9:0,9,82	0/0:23,0:23:56.98:0,57,510	0/0:11,0:11:33.02:0,33,302	0/0:25,1:26:57.01:0,57,521	0/0:31,0:30:84.02:0,84,768	0/0:22,0:22:66.04:0,66,603
chr10	98948970	.	TAATC	T	13684.88	PASS	AB=0.861;AC=55;AF=0.982;AN=56;BaseQRankSum=-1.603;DP=629;FS=4.801;HRun=0;HaplotypeScore=107.4372;InbreedingCoeff=-0.0384;MQ=75.21;MQ0=3;MQRankSum=1.194;QD=21.76;ReadPosRankSum=1.720;VQSLOD=4.5656;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,26:35:54.18:852,54,0	1/1:2,1:3:3.01:47,3,0	1/1:28,3:22:6.02:94,6,0	0/1:26,5:27:18.59:240,0,19	1/1:8,11:19:27.09:425,27,0	1/1:7,11:17:27.09:426,27,0	1/1:6,13:19:39.13:614,39,0	1/1:29,5:34:15.05:232,15,0	1/1:10,16:25:42.14:663,42,0	1/1:8,17:25:51.17:799,51,0	1/1:9,5:14:12.04:189,12,0	1/1:9,11:20:33.11:521,33,0	1/1:4,16:20:39.13:616,39,0	1/1:11,11:22:33.11:521,33,0	1/1:16,17:33:48.16:758,48,0	1/1:8,0:19:36.05:343,36,0	1/1:9,24:33:69.23:1089,69,0	1/1:13,7:20:24.08:378,24,0	1/1:15,5:20:12.04:189,12,0	1/1:7,11:18:36.12:567,36,0	1/1:6,16:22:39.13:616,39,0	1/1:7,10:17:27.09:426,27,0	1/1:4,4:8:12.04:189,12,0	1/1:7,16:23:39.13:616,39,0	1/1:3,13:17:33.11:521,33,0	1/1:10,20:30:57.19:900,57,0	1/1:13,22:35:51.17:805,51,0	1/1:7,6:13:3.01:47,3,0
chr10	98951071	.	CCA	C	454.42	PASS	AB=0.949;AC=21;AF=0.420;AN=50;BaseQRankSum=4.546;DP=581;FS=10.036;HRun=0;HaplotypeScore=72.4697;InbreedingCoeff=-0.2700;MQ=72.91;MQ0=13;MQRankSum=0.426;QD=1.10;ReadPosRankSum=-1.939;VQSLOD=0.1962;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,1:28:16.24:16,0,223	0/0:6,0:6:6.02:0,6,88	./.	./.	0/1:19,0:19:56.12:56,0,192	0/1:20,2:23:5.26:5,0,257	0/1:37,0:35:1.42:1,0,194	./.	0/1:11,3:14:20.20:20,0,116	0/1:18,0:18:29.15:29,0,98	0/0:12,0:12:12.04:0,12,162	0/1:28,0:27:5.58:6,0,251	0/1:16,4:20:12.36:12,0,207	0/1:19,0:18:16.85:17,0,140	0/1:20,0:20:43.57:44,0,157	1/1:26,0:32:24.16:131,24,0	0/1:22,2:25:54.64:55,0,321	0/0:22,0:22:35.26:0,35,442	0/0:6,0:6:3.01:0,3,44	0/1:19,1:19:14.20:14,0,182	0/1:30,4:33:50.21:50,0,78	0/0:17,0:17:11.91:0,12,115	0/0:16,0:16:12.02:0,12,170	0/1:42,0:43:86.66:87,0,365	0/1:14,1:15:19.39:19,0,146	1/1:13,0:14:5.68:28,6,0	0/0:11,0:11:15.05:0,15,219	1/1:4,0:3:2.84:14,3,0
chr10	98951961	.	AC	A	800.91	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.312;DP=821;FS=3.977;HRun=2;HaplotypeScore=78.2790;InbreedingCoeff=0.9995;MQ=80.10;MQ0=0;MQRankSum=-0.743;QD=34.82;ReadPosRankSum=0.452;VQSLOD=4.0604;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,153,2250	0/0:11,0:11:33.11:0,33,494	0/0:21,0:21:49.95:0,50,658	0/0:27,0:27:75.14:0,75,1035	0/0:22,0:22:66.17:0,66,960	0/0:16,0:16:48.16:0,48,720	0/0:23,0:23:69.23:0,69,1030	0/0:32,0:32:96.31:0,96,1416	0/0:27,0:27:78.21:0,78,1142	0/0:39,0:39:99:0,117,1749	0/0:14,0:13:35.79:0,36,536	0/0:40,0:40:99:0,120,1795	0/0:35,0:35:99:0,102,1526	0/0:33,0:33:99:0,99,1457	0/0:41,0:41:99:0,120,1778	1/1:0,23:23:69.22:896,69,0	0/0:41,0:41:99:0,123,1842	0/0:22,0:22:66.22:0,66,981	0/0:24,0:24:72.22:0,72,1034	0/0:22,0:22:66.22:0,66,988	0/0:69,0:69:99:0,208,3055	0/0:31,0:31:93.30:0,93,1372	0/0:28,0:28:78.24:0,78,1128	0/0:34,0:34:99:0,102,1517	0/0:23,0:23:69.23:0,69,1031	0/0:33,0:33:99:0,99,1483	0/0:24,0:24:72.23:0,72,1060	0/0:13,0:13:39.13:0,39,584
chr10	98952619	.	C	CGTACT	9258.46	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.855;DP=797;FS=8.138;HRun=0;HaplotypeScore=139.8204;InbreedingCoeff=0.9880;MQ=70.75;MQ0=0;MQRankSum=-4.648;QD=80.51;ReadPosRankSum=2.346;VQSLOD=7.0257;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:48:96.33:3192,96,0	0/0:8,0:8:24.08:0,24,558	0/0:8,0:9:21.02:0,21,372	0/0:13,0:13:12.69:0,13,579	0/0:39,0:39:99:0,114,2500	0/0:23,0:23:69.22:0,69,1561	0/0:42,0:42:99:0,126,2852	0/0:38,0:38:99:0,111,2522	0/0:37,0:37:99:0,111,2474	0/0:30,0:30:90.29:0,90,1977	0/0:24,0:24:72.25:0,72,1646	0/0:34,0:34:99:0,102,2329	0/0:39,0:39:99:0,108,2487	0/0:27,0:27:78.27:0,78,1807	0/0:30,0:30:90.31:0,90,2073	1/1:9,33:46:99:4291,132,0	0/0:34,0:34:99:0,102,2353	1/1:1,18:21:54.19:1775,54,0	0/0:17,0:17:48.16:0,48,1119	0/0:24,0:24:72.25:0,72,1655	0/0:58,0:58:99:0,166,3667	0/0:16,0:16:42.12:0,42,889	0/0:20,0:20:60.21:0,60,1378	0/0:28,0:28:81.28:0,81,1886	0/0:20,0:20:57.20:0,57,1306	0/0:34,0:34:99:0,99,2259	0/0:29,0:29:81.23:0,81,1799	0/0:9,0:9:27.09:0,27,629
chr10	98953621	.	G	GCTT	1330.71	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.611;DP=414;FS=2.445;HRun=0;HaplotypeScore=68.5233;InbreedingCoeff=0.9683;MQ=66.52;MQ0=5;MQRankSum=-5.943;QD=23.76;ReadPosRankSum=2.181;VQSLOD=3.3713;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:23:47.93:679,48,0	0/0:7,0:7:15.04:0,15,198	0/0:26,0:9:21.86:0,22,222	0/0:26,0:16:38.09:0,38,256	0/0:16,0:15:39.05:0,39,524	0/0:14,0:13:30.08:0,30,406	0/0:11,0:11:26.96:0,27,333	0/0:27,0:27:56.45:0,56,738	0/0:7,0:7:18.02:0,18,204	0/0:16,0:16:46.01:0,46,609	0/0:13,0:13:32.11:0,32,448	0/0:11,0:11:33.08:0,33,443	0/0:13,0:13:35.85:0,36,427	0/0:11,0:11:30.09:0,30,444	0/0:12,0:12:34.90:0,35,442	1/1:0,12:12:27.09:537,27,0	0/0:32,0:32:90.12:0,90,1324	1/1:20,0:19:18.06:256,18,0	0/0:17,0:16:45.02:0,45,565	0/0:8,0:7:15.03:0,15,174	0/0:9,0:8:21.05:0,21,296	0/0:9,0:9:23.99:0,24,328	0/0:6,0:6:17.94:0,18,199	0/0:17,0:15:30.07:0,30,411	0/0:12,0:12:32.93:0,33,377	0/0:14,0:14:36.02:0,36,490	0/0:17,0:18:47.15:0,47,538	0/0:5,0:5:14.04:0,14,118
chr10	98953622	.	C	CTTCTT	2180.83	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.493;DP=435;FS=0.623;HRun=0;HaplotypeScore=89.0442;InbreedingCoeff=0.8927;MQ=65.12;MQ0=5;MQRankSum=-6.970;QD=34.62;ReadPosRankSum=0.171;VQSLOD=3.5182;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,21:29:63.16:1436,63,0	0/0:7,0:7:15.04:0,15,222	0/0:25,0:9:11.40:0,11,224	0/0:26,0:16:33.66:0,34,255	0/0:16,0:17:4.48:0,4,602	0/0:12,0:14:28.20:0,28,464	0/0:7,0:11:27.07:0,27,427	0/0:25,0:29:37.98:0,38,859	0/0:8,0:8:17.98:0,18,220	0/0:15,0:16:45.60:0,46,729	0/0:13,0:13:32.09:0,32,545	0/0:11,0:11:32.75:0,33,496	0/0:14,0:14:36.68:0,37,508	0/0:11,0:11:30.05:0,30,548	0/0:11,0:12:34.90:0,35,523	1/1:12,0:12:27.08:312,27,0	0/0:30,0:32:89.03:0,89,1599	1/1:3,15:20:21.07:574,21,0	0/0:17,0:17:41.96:0,42,645	0/0:8,0:7:15.03:0,15,162	0/0:10,0:9:21.02:0,21,356	0/0:9,0:10:7.92:0,8,356	0/0:3,0:6:18.05:0,18,253	0/0:16,0:15:29.99:0,30,489	0/0:11,0:13:32.47:0,32,450	0/0:15,0:16:37.81:0,38,585	0/0:17,0:19:50.84:0,51,674	0/0:3,0:5:14.04:0,14,127
chr10	98953755	.	T	TA	1524.27	PASS	AB=0.764;AC=12;AF=0.214;AN=56;BaseQRankSum=-8.130;DP=418;FS=13.038;HRun=12;HaplotypeScore=62.0886;InbreedingCoeff=0.7450;MQ=83.89;MQ0=0;MQRankSum=0.253;QD=12.81;ReadPosRankSum=1.058;VQSLOD=2.2917;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:30:40.72:0,41,120	0/0:5,0:5:14.91:0,15,109	0/0:17,1:19:18.54:0,19,116	0/0:16,0:16:15.05:0,15,108	0/0:16,0:16:41.70:0,42,301	0/0:12,0:12:32.81:0,33,241	0/0:11,0:11:23.85:0,24,175	0/0:5,0:20:24.51:0,25,70	0/0:8,0:8:16.13:0,16,112	0/0:9,0:9:23.84:0,24,175	0/0:8,0:9:22.91:0,23,159	0/0:11,0:11:20.81:0,21,149	0/1:18,2:21:14.67:15,0,219	0/0:12,0:12:29.77:0,30,219	1/1:2,11:13:32.97:302,33,0	0/0:1,0:16:28.52:0,29,84	1/1:3,19:22:26.25:416,26,0	0/0:1,0:26:37.91:0,38,111	1/1:3,8:12:4.91:172,5,0	1/1:5,10:16:35.89:334,36,0	0/1:9,15:24:51.59:198,0,52	0/0:10,0:10:14.89:0,15,109	0/0:10,0:11:25.85:0,26,179	0/0:11,0:11:26.78:0,27,192	0/0:17,0:17:41.73:0,42,305	0/0:3,0:14:22.39:0,22,65	1/1:1,10:11:27.04:263,27,0	0/0:2,0:15:26.46:0,26,76
chr10	98955116	.	GTGAA	G	1419.75	PASS	AB=0.941;AC=3;AF=0.054;AN=56;BaseQRankSum=7.051;DP=863;FS=12.048;HRun=0;HaplotypeScore=135.3214;InbreedingCoeff=0.4870;MQ=63.59;MQ0=1;MQRankSum=0.778;QD=24.91;ReadPosRankSum=2.177;VQSLOD=3.1075;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:43:63.20:0,63,1077	0/0:17,0:17:42.10:0,42,877	0/0:11,0:10:9.01:0,9,143	0/0:16,0:11:9.03:0,9,203	0/0:31,0:31:69.24:0,69,1517	0/0:26,0:26:57.20:0,57,1337	0/0:34,1:35:20.46:0,20,1411	0/0:40,0:40:3.13:0,3,994	0/0:49,0:49:99:0,117,2633	0/0:37,0:37:35.94:0,36,1815	0/0:22,0:22:54.19:0,54,1239	0/0:51,0:51:99:0,108,2400	0/0:19,1:20:2.40:0,2,1050	0/0:37,0:37:69.22:0,69,1477	0/0:48,1:49:68.63:0,69,2532	1/1:4,37:41:93.32:1512,93,0	0/0:43,2:45:41.52:0,42,1839	0/0:7,0:18:27.07:0,27,464	0/0:27,0:26:39.12:0,39,756	0/0:29,0:29:72.24:0,72,1555	0/0:51,0:51:99:0,123,2830	0/0:18,0:18:36.12:0,36,812	0/0:25,0:25:57.19:0,57,1264	0/0:30,0:30:81.27:0,81,1846	0/0:25,0:25:60.20:0,60,1412	0/0:35,0:35:78.26:0,78,1781	0/1:15,1:16:9.72:10,0,695	0/0:17,0:17:36.12:0,36,871
chr10	98955695	.	A	AAAAG	1363.63	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=-5.353;DP=412;FS=5.134;HRun=0;HaplotypeScore=77.3991;InbreedingCoeff=0.8492;MQ=65.36;MQ0=11;MQRankSum=0.315;QD=18.43;ReadPosRankSum=-1.549;VQSLOD=2.2880;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:18.02:0,18,167	0/0:5,0:5:6.02:0,6,91	./.	./.	0/0:23,0:23:30.07:0,30,411	0/0:20,0:20:33.10:0,33,480	0/0:3,0:3:5.98:0,6,48	1/1:23,0:20:11.88:81,12,0	0/0:7,0:7:12:0,12,138	0/0:13,0:13:24.06:0,24,325	0/0:19,0:19:33.09:0,33,460	0/0:15,0:15:24.08:0,24,362	0/0:9,0:9:12.04:0,12,181	0/0:18,0:18:24.07:0,24,344	0/0:20,0:20:30.10:0,30,452	0/0:19,0:19:17.71:0,18,147	0/0:20,0:20:30.09:0,30,435	0/0:15,0:14:5.60:0,6,38	0/0:21,0:21:24.07:0,24,340	0/0:17,0:17:27.06:0,27,350	0/0:6,0:6:15.05:0,15,227	0/0:3,0:3:9.03:0,9,136	1/1:5,6:10:21.07:466,21,0	1/1:7,7:15:17.55:355,18,0	0/0:14,0:14:12.04:0,12,180	1/1:11,11:21:26.29:484,26,0	0/0:23,0:23:24.06:0,24,323	1/1:1,2:3:6.02:138,6,0
chr10	98955696	.	AAAGAAAGAAAG	A	1122.42	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=5.623;DP=412;FS=4.973;HRun=0;HaplotypeScore=129.1777;InbreedingCoeff=0.7508;MQ=65.33;MQ0=11;MQRankSum=-4.815;QD=16.75;ReadPosRankSum=2.368;VQSLOD=2.0802;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:18.53:483,19,0	0/0:5,0:5:9.02:0,9,394	0/1:19,0:7:5.09:5,0,80	0/0:16,0:7:11.89:0,12,85	0/0:23,0:23:66.13:0,66,2265	0/0:19,0:19:57.10:0,57,2150	0/0:4,0:4:12.04:0,12,465	0/0:21,0:18:51:0,51,929	0/0:8,0:8:18.03:0,18,740	0/0:13,0:13:39.07:0,39,1412	0/0:19,0:19:53.15:0,53,2139	0/0:15,0:15:39.05:0,39,1442	0/0:9,0:9:24.04:0,24,959	0/0:18,0:18:51.07:0,51,1741	0/0:20,0:20:54.08:0,54,2058	1/1:2,17:19:22.01:610,22,0	0/0:20,0:20:53.89:0,54,2047	1/1:15,0:14:6.02:160,6,0	0/0:21,0:21:35.11:0,35,1840	0/0:17,0:17:48.10:0,48,1745	0/0:6,0:6:18.05:0,18,853	0/0:3,0:3:9.03:0,9,498	0/0:11,0:10:26.99:0,27,1169	0/0:16,0:16:36.05:0,36,1040	0/0:14,0:14:38.84:0,39,875	0/0:21,0:20:60.09:0,60,1988	0/0:23,0:23:68.36:0,68,2228	0/0:3,0:3:6.49:0,6,298
chr10	98955697	.	AAGAAAGAAAGAAAGAAAG	A	1128.43	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.695;DP=414;FS=9.175;HRun=0;HaplotypeScore=182.0294;InbreedingCoeff=0.8092;MQ=65.24;MQ0=12;MQRankSum=-4.360;QD=38.91;ReadPosRankSum=1.990;VQSLOD=2.4308;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:20.74:932,21,0	0/0:4,0:4:9.02:0,9,668	0/0:18,0:7:12.87:0,13,116	0/0:15,0:7:11.75:0,12,86	0/0:24,0:24:69.20:0,69,3963	0/0:19,0:19:57.17:0,57,3337	0/0:4,0:4:12.04:0,12,828	0/0:22,0:18:51.09:0,51,1430	0/0:8,0:8:18.04:0,18,1271	0/0:13,0:13:39.12:0,39,2196	0/0:19,0:19:53.99:0,54,3345	0/0:15,0:15:39.08:0,39,2196	0/0:9,0:9:24.06:0,24,1662	0/0:18,0:18:51.13:0,51,2843	0/0:20,0:20:54.12:0,54,3209	0/0:18,0:19:18.14:0,18,104	0/0:20,0:20:53.80:0,54,3281	1/1:2,13:14:6.02:306,6,0	0/0:22,0:21:33.56:0,34,2876	0/0:17,0:17:48.13:0,48,2879	0/0:6,0:6:18.06:0,18,1316	0/0:3,0:3:9.03:0,9,772	0/0:11,0:10:26.90:0,27,1912	0/0:17,0:17:40:0,40,1880	0/0:14,0:14:39.09:0,39,1361	0/0:21,0:20:60.17:0,60,3156	0/0:23,0:23:68.58:0,69,3895	0/0:3,0:3:9.03:0,9,530
chr10	98956027	.	CATT	C	2376.27	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.624;DP=568;FS=1.074;HRun=0;HaplotypeScore=93.8557;InbreedingCoeff=0.9702;MQ=67.92;MQ0=1;MQRankSum=-0.616;QD=37.72;ReadPosRankSum=2.065;VQSLOD=4.6489;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:51.15:726,51,0	0/0:10,0:10:30.09:0,30,662	0/0:9,0:9:12.84:0,13,525	0/0:3,0:3:9.03:0,9,156	0/0:36,0:36:99:0,105,2538	0/0:21,0:21:63.22:0,63,1548	0/0:17,0:17:51.18:0,51,1233	0/0:28,0:28:81.24:0,81,1947	0/0:18,0:18:54.19:0,54,1331	0/0:19,0:19:57.19:0,57,1360	0/0:23,0:23:69.22:0,69,1635	0/0:23,0:23:69.24:0,69,1665	0/0:31,0:31:93.32:0,93,2281	0/0:21,0:21:63.22:0,63,1553	0/0:24,0:24:72.25:0,72,1775	1/1:2,26:27:78.16:1096,78,0	0/0:38,0:38:99:0,114,2694	1/1:1,17:17:49.96:697,50,0	0/0:14,0:14:42.14:0,42,974	0/0:33,0:33:99:0,99,2442	0/0:12,0:12:36.12:0,36,885	0/0:12,0:12:36.12:0,36,888	0/0:20,0:20:60.21:0,60,1479	0/0:10,0:10:30.10:0,30,733	0/0:20,0:20:60.21:0,60,1479	0/0:25,0:25:75.26:0,75,1849	0/0:24,0:24:72.23:0,72,1725	0/0:14,0:14:42.14:0,42,1020
chr10	98956034	.	A	AGG	3470.50	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=12.971;DP=568;FS=0.000;HRun=0;HaplotypeScore=82.0147;InbreedingCoeff=0.8042;MQ=67.89;MQ0=1;MQRankSum=-2.833;QD=46.27;ReadPosRankSum=-0.007;VQSLOD=4.7172;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:21:63.19:1055,63,0	0/0:9,0:9:27.09:0,27,439	0/0:9,0:9:3.96:0,4,266	0/1:3,0:3:12.24:12,0,89	0/0:33,0:33:93.28:0,93,1446	0/0:21,0:21:63.22:0,63,1025	0/0:16,0:16:48.16:0,48,783	0/0:28,0:28:78.26:0,78,1246	0/0:18,0:18:54.18:0,54,881	0/0:18,0:18:54.18:0,54,881	0/0:22,0:22:66.22:0,66,1054	0/0:22,0:22:66.22:0,66,1066	0/0:30,0:30:90.31:0,90,1466	0/0:21,0:21:63.22:0,63,1025	0/0:24,0:24:72.25:0,72,1170	1/1:4,26:29:87.29:1436,87,0	0/0:41,0:41:99:0,123,1873	1/1:4,17:20:60.16:968,60,0	0/0:12,0:12:36.11:0,36,565	0/0:31,0:31:90.30:0,90,1446	0/0:13,0:13:39.13:0,39,636	0/0:13,0:13:39.12:0,39,610	0/0:20,0:20:60.20:0,60,979	0/0:10,0:10:30.10:0,30,487	0/0:20,0:20:60.15:0,60,926	0/0:27,0:27:78.25:0,78,1247	0/0:22,0:22:66.23:0,66,1077	0/0:13,0:13:39.13:0,39,636
chr10	98956747	.	A	AT	2075.72	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.949;DP=699;FS=0.504;HRun=5;HaplotypeScore=63.3929;InbreedingCoeff=0.8901;MQ=75.74;MQ0=0;MQRankSum=-3.038;QD=31.93;ReadPosRankSum=1.055;VQSLOD=4.2357;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,39:41:99:1458,111,0	0/0:17,0:17:45.05:0,45,456	0/0:12,0:12:1.13:0,1,230	0/0:19,0:18:18.56:0,19,242	0/0:40,0:40:99:0,114,1218	0/0:19,0:19:57.14:0,57,613	0/0:18,0:18:54.14:0,54,580	0/0:38,0:38:99:0,105,1109	0/0:25,0:25:66.11:0,66,677	0/0:26,0:26:66.16:0,66,703	0/0:24,0:24:69.17:0,69,740	0/0:30,0:30:83.56:0,84,870	0/0:27,0:27:72.16:0,72,760	0/0:25,0:25:75.19:0,75,806	0/0:30,0:30:84.17:0,84,881	0/0:31,0:31:81.20:0,81,870	0/0:22,0:22:66.16:0,66,702	1/1:4,20:24:57.18:739,57,0	0/0:20,0:20:45.10:0,45,477	0/0:36,0:36:99:0,105,1106	0/0:23,0:23:66.12:0,66,691	0/0:18,0:18:51.13:0,51,548	0/0:31,0:31:84.14:0,84,870	0/0:22,0:22:60.15:0,60,644	0/0:16,0:16:48.11:0,48,510	0/0:28,0:28:72.16:0,72,760	0/0:26,0:26:72.16:0,72,765	0/0:11,0:11:30.03:0,30,304
chr10	98965148	.	A	AT	2022.01	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.163;DP=558;FS=3.014;HRun=8;HaplotypeScore=53.6202;InbreedingCoeff=0.9928;MQ=82.64;MQ0=0;MQRankSum=-4.402;QD=27.70;ReadPosRankSum=1.635;VQSLOD=4.3804;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:34:81.24:935,81,0	0/0:8,0:8:15.01:0,15,137	0/0:17,0:17:44.98:0,45,397	0/0:15,0:15:31.16:0,31,265	0/0:26,0:26:66:0,66,599	0/0:25,0:25:75.04:0,75,686	0/0:20,0:20:44.97:0,45,398	0/0:20,0:20:39:0,39,357	0/0:11,0:11:33.02:0,33,302	0/0:27,0:27:75.04:0,75,686	0/0:18,0:18:42.02:0,42,384	0/0:23,0:23:63.03:0,63,576	0/0:12,0:12:33.02:0,33,302	0/0:15,0:15:36.02:0,36,329	0/0:24,0:24:63.01:0,63,572	1/1:1,19:20:57.17:658,57,0	0/0:26,0:26:72.01:0,72,652	1/1:2,17:19:51.12:572,51,0	0/0:24,0:24:69.01:0,69,625	0/0:10,0:10:27.01:0,27,247	0/0:18,0:18:45.01:0,45,412	0/0:18,0:18:47.99:0,48,430	0/0:22,0:22:54.03:0,54,494	0/0:19,0:19:53.98:0,54,486	0/0:19,0:19:41.99:0,42,379	0/0:29,0:29:80.98:0,81,725	0/0:30,0:30:84.02:0,84,763	0/0:9,0:9:24.01:0,24,220
chr10	98968333	.	TTTA	T	431.11	PASS	AB=0.862;AC=3;AF=0.054;AN=56;BaseQRankSum=3.899;DP=509;FS=10.938;HRun=0;HaplotypeScore=71.2710;InbreedingCoeff=0.0280;MQ=72.78;MQ0=11;MQRankSum=0.322;QD=4.74;ReadPosRankSum=2.652;VQSLOD=0.6039;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,3:32:9.85:373,0,10	0/0:6,0:6:18.03:0,18,222	0/0:49,0:22:45.28:0,45,449	0/1:37,0:16:10.92:11,0,137	0/0:7,0:7:15.44:0,15,161	0/0:15,0:15:41.85:0,42,528	0/0:20,0:20:36.31:0,36,466	0/0:34,0:34:81.92:0,82,1040	0/0:13,0:12:26.97:0,27,320	0/0:13,0:13:30.89:0,31,324	0/0:6,0:6:17.96:0,18,163	0/0:18,0:18:51.12:0,51,657	0/0:18,0:18:45.05:0,45,527	0/0:17,0:17:39.02:0,39,517	0/0:13,0:13:39.10:0,39,615	0/0:16,0:16:18.62:0,19,148	0/0:27,0:27:63.14:0,63,843	0/1:10,10:19:13.79:144,0,14	0/0:21,0:21:52.43:0,52,506	0/0:11,0:11:32.98:0,33,327	0/0:9,0:9:17.78:0,18,175	0/0:5,0:5:15.03:0,15,158	0/0:7,0:7:18.04:0,18,231	0/0:18,0:18:47.95:0,48,578	0/0:14,0:14:38.78:0,39,350	0/0:32,0:32:85.33:0,85,1064	0/0:12,0:11:23.65:0,24,258	0/0:17,0:16:35.02:0,35,352
chr10	98968334	.	TTA	T	665.61	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=3.023;DP=494;FS=10.595;HRun=0;HaplotypeScore=60.8482;InbreedingCoeff=0.6857;MQ=72.47;MQ0=11;MQRankSum=-0.375;QD=7.31;ReadPosRankSum=1.278;VQSLOD=1.9846;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,6:30:68.16:544,68,0	0/0:6,0:6:16.81:0,17,158	0/0:47,0:20:33.20:0,33,315	0/1:34,0:15:7.39:7,0,76	0/1:7,0:7:1.69:2,0,102	0/0:15,0:15:36.71:0,37,350	0/0:18,0:18:30.85:0,31,273	0/0:33,0:33:78.21:0,78,778	0/0:13,0:12:20.90:0,21,203	0/0:11,0:11:27.39:0,27,243	0/0:6,0:6:14.91:0,15,116	0/0:18,0:18:53.80:0,54,504	0/0:18,0:18:41.96:0,42,400	0/0:17,0:17:32.99:0,33,371	0/0:14,0:14:41.90:0,42,486	0/0:16,0:16:22.56:0,23,142	0/0:27,0:27:62.81:0,63,616	1/1:14,4:18:23.63:239,24,0	0/0:19,0:19:20.51:0,21,333	0/0:11,0:11:32.56:0,33,265	0/0:9,0:9:19.95:0,20,155	0/0:5,0:5:14.94:0,15,120	0/0:7,0:7:20.89:0,21,187	0/0:17,0:17:38.99:0,39,407	0/0:15,0:15:35.77:0,36,286	0/0:32,0:32:83.97:0,84,868	0/0:13,0:12:29.37:0,29,217	0/0:16,0:15:32.03:0,32,279
chr10	98968483	.	TC	T	1146.29	PASS	AB=0.861;AC=8;AF=0.143;AN=56;BaseQRankSum=5.624;DP=396;FS=8.410;HRun=9;HaplotypeScore=44.0730;InbreedingCoeff=0.6273;MQ=81.40;MQ0=0;MQRankSum=-0.633;QD=12.74;ReadPosRankSum=2.162;VQSLOD=2.2815;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:50.96:458,51,0	0/0:9,0:9:27.05:0,27,291	0/1:12,2:12:13.65:14,0,137	0/0:12,0:12:18.04:0,18,187	0/0:15,0:15:30.06:0,30,328	0/0:19,0:19:45.12:0,45,508	0/0:30,0:30:66.17:0,66,742	0/0:20,0:20:27.08:0,27,312	0/0:16,1:16:14.66:0,15,423	0/0:12,1:13:2.62:0,3,276	0/0:6,0:6:9.03:0,9,104	0/0:17,0:17:36.99:0,37,414	0/0:5,0:5:12.04:0,12,138	0/0:14,0:14:36.08:0,36,397	0/0:16,0:17:47.97:0,48,534	1/1:3,9:12:21.01:192,21,0	0/0:25,0:25:69.19:0,69,787	1/1:3,25:28:66.03:604,66,0	0/1:9,2:11:30.86:31,0,184	0/0:8,0:8:15.04:0,15,173	0/0:21,0:21:38.49:0,38,573	0/0:7,0:7:18.05:0,18,208	0/0:5,1:6:12.03:0,12,134	0/0:11,0:11:30.09:0,30,346	0/0:6,0:6:15.04:0,15,165	0/0:5,0:5:12.04:0,12,139	0/0:16,0:16:36.41:0,36,416	0/0:7,0:7:21.06:0,21,242
chr10	98971807	.	TC	T	796.98	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=4.281;DP=313;FS=16.328;HRun=7;HaplotypeScore=51.3940;InbreedingCoeff=0.3112;MQ=73.53;MQ0=2;MQRankSum=-5.761;QD=12.85;ReadPosRankSum=3.236;VQSLOD=1.3759;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:4.81:0,5,30	0/0:4,0:4:9.03:0,9,108	0/1:21,0:12:3.16:3,0,117	0/0:18,0:13:12.35:0,12,89	0/0:14,0:14:24.08:0,24,299	0/0:12,0:12:23:0,23,203	0/0:20,0:20:44.60:0,45,437	0/0:19,0:19:21.07:0,21,263	0/1:7,0:7:16.80:17,0,88	0/0:3,0:3:3.01:0,3,38	0/0:9,0:9:18.03:0,18,197	0/0:5,0:5:8.98:0,9,107	0/0:15,0:15:29.83:0,30,307	0/0:10,0:10:18.65:0,19,178	0/0:10,0:10:21.04:0,21,230	1/1:12,22:34:93.09:883,93,0	0/0:11,0:11:12.21:0,12,88	0/0:9,0:9:1.10:0,1,3	0/0:11,0:11:17.76:0,18,136	0/0:7,0:7:11.99:0,12,121	0/0:20,0:20:30.03:0,30,334	0/0:5,0:5:12.04:0,12,145	0/0:4,0:4:6.01:0,6,63	0/0:5,0:5:12.02:0,12,134	0/0:10,0:10:24.08:0,24,299	0/0:7,0:7:11.85:0,12,104	0/0:5,0:5:9.03:0,9,108	0/0:7,0:7:2.90:0,3,16
chr10	98971814	.	CT	C	910.87	PASS	AB=0.986;AC=16;AF=0.286;AN=56;BaseQRankSum=4.234;DP=269;FS=0.000;HRun=1;HaplotypeScore=39.9829;InbreedingCoeff=0.0475;MQ=73.79;MQ0=3;MQRankSum=-2.375;QD=6.03;ReadPosRankSum=1.412;VQSLOD=0.5716;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:5:0.06:90,0,0	0/0:3,0:3:8.64:0,9,51	0/0:22,0:13:2.47:0,2,92	0/1:14,1:9:7.21:7,0,61	0/0:9,0:9:23.90:0,24,194	0/1:10,0:10:11.20:11,0,78	0/1:20,0:20:23.63:24,0,113	0/0:11,0:11:20.91:0,21,185	0/1:7,0:7:19.13:19,0,42	0/0:2,0:2:3:0,3,27	0/0:5,0:5:11.95:0,12,92	0/1:6,0:6:15.26:15,0,42	0/1:13,0:13:22.54:23,0,99	0/1:9,0:9:28.11:28,0,50	0/0:10,0:10:9.82:0,10,89	1/1:33,0:33:90.88:551,91,0	0/1:8,0:8:16.12:40,0,16	1/1:11,0:11:25.55:211,26,0	0/1:11,1:12:20.10:42,0,20	0/0:6,0:6:8.99:0,9,80	0/0:17,0:17:20.99:0,21,162	0/0:5,0:5:10.24:0,10,79	0/0:3,0:3:2.84:0,3,22	0/0:5,0:5:3.99:0,4,48	0/0:9,0:9:23.78:0,24,175	0/0:3,3:6:8.82:0,9,40	0/0:5,0:5:8.29:0,8,71	1/1:2,0:2:2.60:10,3,0
chr10	98973535	.	CTG	C	1155.62	PASS	AB=0.898;AC=19;AF=0.352;AN=54;BaseQRankSum=7.497;DP=891;FS=4.049;HRun=0;HaplotypeScore=141.3906;InbreedingCoeff=-0.4013;MQ=62.30;MQ0=17;MQRankSum=2.790;QD=1.98;ReadPosRankSum=2.091;VQSLOD=2.0516;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,11:29:24.05:262,24,0	0/1:10,3:13:16.24:16,0,209	./.	0/0:30,0:15:5.96:0,6,43	0/1:16,0:16:27.01:27,0,284	0/1:13,4:17:47.37:47,0,173	0/1:32,2:34:45.99:46,0,599	0/0:37,0:29:6.30:0,6,231	0/1:30,3:33:53.60:54,0,539	0/1:53,2:53:56.45:56,0,946	0/0:11,0:12:18.05:0,18,254	0/1:32,2:34:99:108,0,570	0/0:27,0:28:41.33:0,41,685	0/1:34,2:33:26.48:26,0,916	0/0:34,1:35:13.04:0,13,888	0/1:23,0:36:9.64:157,0,10	0/1:25,2:27:39.19:39,0,676	0/1:20,9:30:64.32:280,0,64	0/0:30,0:23:21.07:0,21,318	0/0:20,1:21:2.19:0,2,452	0/1:85,5:88:49.35:49,0,1374	0/0:34,1:35:26.26:0,26,981	0/1:19,4:23:53.62:54,0,522	0/1:41,1:43:1.50:1,0,829	0/1:28,3:31:61.76:62,0,542	0/0:38,4:42:1.16:0,1,1001	0/1:16,0:15:17.29:17,0,460	0/1:14,1:15:6.81:7,0,336
chr10	98973597	.	CTGTG	C	245.67	PASS	AB=0.914;AC=3;AF=0.054;AN=56;BaseQRankSum=6.009;DP=1173;FS=0.000;HRun=0;HaplotypeScore=178.0353;InbreedingCoeff=-0.0603;MQ=45.00;MQ0=101;MQRankSum=-0.645;QD=2.08;ReadPosRankSum=2.006;VQSLOD=2.5347;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:32,17:41:23.88:240,0,24	0/0:15,0:12:22.12:0,22,484	0/0:15,0:2:6.01:0,6,65	0/0:27,0:4:9.50:0,10,207	0/0:32,0:28:63.16:0,63,1327	0/0:22,0:22:46.34:0,46,1010	0/0:45,0:41:99:0,99,2137	0/0:91,0:44:90.25:0,90,1738	0/0:35,0:35:63.32:0,63,1421	0/0:63,0:52:99:0,123,2322	0/0:25,0:19:39.03:0,39,823	0/0:51,0:46:99:0,99,2262	0/0:44,0:34:77:0,77,1610	0/0:54,0:42:99:0,101,2336	0/0:45,0:41:91.43:0,91,1924	0/1:30,0:25:49.05:49,0,163	0/0:34,0:28:66.20:0,66,1414	0/1:39,0:35:56.12:56,0,1166	0/0:39,0:20:33.58:0,34,684	0/0:24,0:22:48.97:0,49,965	0/0:131,0:109:99:0,196,4326	0/0:50,0:44:90.07:0,90,1844	0/0:24,0:19:36.08:0,36,682	0/0:70,0:66:99:0,132,3209	0/0:34,0:28:57.15:0,57,1237	0/0:47,0:39:87.24:0,87,1797	0/0:19,0:17:44.94:0,45,981	0/0:17,0:15:36.11:0,36,714
chr10	98973607	.	GTC	G	360.03	PASS	AB=0.994;AC=5;AF=0.089;AN=56;BaseQRankSum=8.031;DP=1196;FS=33.935;HRun=0;HaplotypeScore=154.0832;InbreedingCoeff=0.3252;MQ=44.94;MQ0=111;MQRankSum=-1.999;QD=2.63;ReadPosRankSum=-2.479;VQSLOD=0.3641;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:50,1:42:8.91:9,0,71	0/1:16,0:13:17.15:17,0,315	0/0:25,0:2:5.97:0,6,60	0/0:35,0:5:10.59:0,11,177	0/0:36,1:33:74.77:0,75,1133	0/0:23,0:23:42.46:0,42,741	0/0:47,0:41:99:0,100,1698	0/0:97,0:53:99:0,128,1691	0/0:34,0:34:56.66:0,57,1211	0/0:53,0:43:90.58:0,91,1660	0/0:25,0:20:34.09:0,34,681	0/0:56,0:51:99:0,113,1831	0/0:44,0:33:39.42:0,39,1177	0/0:54,0:43:82.90:0,83,1713	0/0:46,0:42:86.90:0,87,1395	1/1:21,10:26:36.89:432,37,0	0/0:36,0:29:71.76:0,72,1112	0/1:39,0:36:21.87:22,0,1067	0/0:36,0:17:37.43:0,37,462	0/0:23,0:22:29.87:0,30,716	0/0:135,0:113:99:0,219,3616	0/0:48,0:42:85.90:0,86,1400	0/0:25,0:19:35.12:0,35,490	0/0:74,0:70:99:0,125,2449	0/0:28,0:24:51.04:0,51,859	0/0:41,0:32:80.92:0,81,1387	0/0:19,0:17:47.76:0,48,680	0/0:18,0:17:17.75:0,18,517
chr10	98973811	.	CTG	C	399.31	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.766;DP=1050;FS=12.520;HRun=0;HaplotypeScore=137.3245;InbreedingCoeff=0.8217;MQ=49.88;MQ0=39;MQRankSum=-0.799;QD=13.77;ReadPosRankSum=-1.100;VQSLOD=2.8568;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:42:77.27:0,77,1157	0/0:10,0:10:27.08:0,27,425	0/0:25,0:4:12.03:0,12,167	0/0:43,0:10:24.05:0,24,346	0/0:17,1:18:45.13:0,45,691	0/0:21,0:20:47.96:0,48,712	0/0:42,0:40:69.16:0,69,1089	0/0:51,0:32:81.05:0,81,1201	0/0:27,0:26:60.20:0,60,973	0/0:47,1:44:67.11:0,67,1541	0/0:15,1:15:30.10:0,30,501	0/0:52,0:51:99:0,120,1888	0/0:41,0:39:96.10:0,96,1404	0/0:40,0:38:81.14:0,81,1259	0/0:50,1:48:76.16:0,76,1701	1/1:11,18:28:39.90:494,40,0	0/0:45,1:43:60.43:0,60,1503	0/0:50,1:49:31.75:0,32,1424	0/0:29,1:16:4:0,4,565	0/0:27,1:28:31.05:0,31,1010	0/0:139,0:124:99:0,198,3672	0/0:35,0:35:87.27:0,87,1395	0/0:13,0:13:36.04:0,36,544	0/0:72,1:69:99:0,150,2221	0/0:20,0:19:39.11:0,39,622	0/0:28,0:25:69.13:0,69,1043	0/0:22,0:19:42.05:0,42,641	0/0:4,0:4:12.04:0,12,197
chr10	98973908	.	C	CTG	2168.78	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=-1.436;DP=1219;FS=8.801;HRun=0;HaplotypeScore=193.7833;InbreedingCoeff=0.9073;MQ=48.04;MQ0=94;MQRankSum=-0.380;QD=19.72;ReadPosRankSum=1.197;VQSLOD=3.0362;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,12:39:44.20:646,44,0	0/0:11,0:10:27.09:0,27,340	./.	0/0:26,0:2:3.01:0,3,32	0/0:25,0:23:45.12:0,45,545	0/0:34,0:32:51.08:0,51,615	0/0:61,0:52:90.04:0,90,1057	0/0:60,0:34:57.09:0,57,680	0/0:34,0:34:66.18:0,66,795	0/0:52,0:46:90.09:0,90,1042	0/0:13,0:11:18.05:0,18,220	0/0:57,0:55:99:0,116,1425	0/0:49,0:42:85.46:0,85,1025	0/0:39,0:37:74.99:0,75,949	0/0:54,0:48:81.15:0,81,979	0/0:49,0:47:59.04:0,59,998	0/0:54,0:48:98.50:0,99,1348	1/1:33,30:55:66.94:1644,67,0	0/0:49,0:10:23.82:0,24,302	0/0:24,0:24:42.13:0,42,524	0/0:162,2:148:99:0,282,3474	0/0:43,0:37:57.15:0,57,813	0/0:23,0:22:35.66:0,36,406	0/0:80,0:75:99:0,132,1649	0/0:20,0:20:30.55:0,31,361	0/0:43,0:39:51.53:0,52,953	0/0:18,0:18:39.12:0,39,492	0/0:8,0:8:17.80:0,18,162
chr10	98974001	.	C	CTG	472.29	PASS	AB=0.911;AC=5;AF=0.089;AN=56;BaseQRankSum=3.401;DP=1056;FS=5.162;HRun=0;HaplotypeScore=160.2650;InbreedingCoeff=0.2544;MQ=51.39;MQ0=45;MQRankSum=-2.015;QD=3.81;ReadPosRankSum=-0.219;VQSLOD=2.6456;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,10:22:6.01:96,6,0	0/0:5,0:5:12.04:0,12,152	0/1:39,0:8:23.34:23,0,129	0/0:37,0:8:5.67:0,6,77	0/0:34,0:33:63.17:0,63,764	0/0:31,0:30:60.18:0,60,750	0/0:51,0:45:99:0,123,1535	0/0:46,0:35:78.17:0,78,930	0/0:40,0:34:72.15:0,72,874	0/0:40,0:37:75.02:0,75,888	0/0:18,0:18:21.06:0,21,261	0/0:53,0:53:99:0,117,1386	0/0:52,0:50:96.15:0,96,1201	0/0:48,0:47:99:0,102,1295	0/0:44,0:42:96.14:0,96,1186	0/1:27,0:20:9.02:9,0,52	0/0:27,0:27:53.99:0,54,647	0/1:21,12:30:30.01:455,0,30	0/0:22,0:10:24.07:0,24,292	0/0:16,0:16:30.10:0,30,381	0/0:161,0:150:99:0,310,3847	0/0:26,0:26:57.15:0,57,686	0/0:27,0:24:48.14:0,48,597	0/0:56,0:56:99:0,129,1538	0/0:20,0:20:36.11:0,36,458	0/0:43,0:41:84.72:0,85,1046	0/0:24,0:25:59.18:0,59,688	0/0:7,0:7:16.76:0,17,226
chr10	98974030	.	C	CTG	1449.05	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.888;DP=1052;FS=0.636;HRun=0;HaplotypeScore=152.1384;InbreedingCoeff=0.9251;MQ=51.91;MQ0=43;MQRankSum=-0.392;QD=17.25;ReadPosRankSum=-3.159;VQSLOD=3.2609;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,17:25:27.08:417,27,0	0/0:7,0:7:12.04:0,12,156	0/0:52,0:11:13.25:0,13,128	0/0:65,0:13:17.32:0,17,176	0/0:29,0:29:51.15:0,51,646	0/0:33,0:32:75.24:0,75,967	0/0:49,0:46:99:0,108,1367	0/0:44,0:36:77.91:0,78,1063	0/0:38,0:35:75.18:0,75,972	0/0:46,0:43:91.19:0,91,1149	0/0:14,0:14:27.07:0,27,337	0/0:44,0:44:99:0,99,1243	0/0:39,0:39:90.22:0,90,1128	0/0:39,0:39:99:0,99,1239	0/0:43,0:41:87.27:0,87,1111	1/1:9,24:26:4.71:624,5,0	0/0:26,0:28:62.54:0,63,760	1/1:9,14:21:29.33:542,29,0	0/0:29,0:15:21.07:0,21,271	0/0:18,0:18:33.11:0,33,428	0/0:141,3:139:99:0,298,3787	0/0:33,0:32:63.33:0,63,770	0/0:17,0:17:27.06:0,27,323	0/0:57,0:57:99:0,141,1828	0/0:23,0:23:50.96:0,51,646	0/0:37,0:35:84.27:0,84,1078	0/0:26,0:25:72.15:0,72,913	0/0:8,0:8:24.08:0,24,309
chr10	98974108	.	GTGTCTC	G	521.98	PASS	AB=0.830;AC=2;AF=0.038;AN=52;BaseQRankSum=7.248;DP=1123;FS=0.808;HRun=0;HaplotypeScore=217.7632;InbreedingCoeff=-0.0404;MQ=47.64;MQ0=77;MQRankSum=-4.099;QD=7.25;ReadPosRankSum=-4.440;VQSLOD=1.8085;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:43:84.71:0,85,2324	0/0:13,0:11:29.59:0,30,874	./.	./.	0/0:38,0:32:75.18:0,75,2042	0/0:41,0:36:62.18:0,62,2330	0/0:73,0:52:99:0,103,2964	0/0:71,0:49:96.28:0,96,2387	0/0:43,1:42:99:0,100,2570	0/0:48,1:38:99:0,108,3087	0/0:24,0:22:40.38:0,40,1236	0/0:61,0:53:99:0,138,3892	0/0:36,0:36:74.43:0,74,2265	0/0:41,0:40:99:0,102,3069	0/0:44,0:40:90.27:0,90,2465	0/1:24,19:34:99:562,0,209	0/0:37,0:35:58.96:0,59,2704	0/1:28,1:23:48.37:48,0,1159	0/0:36,0:13:33.10:0,33,895	0/0:24,0:23:29.84:0,30,874	0/0:129,0:116:99:0,227,6889	0/0:36,0:33:71.45:0,71,1776	0/0:22,0:17:33.10:0,33,817	0/0:62,0:61:99:0,141,4278	0/0:29,0:29:51.02:0,51,1337	0/0:33,0:25:69.14:0,69,1838	0/0:22,0:22:43.18:0,43,1492	0/0:6,0:6:17.80:0,18,533
chr10	98974380	.	CTT	C	795.50	PASS	AB=0.900;AC=7;AF=0.125;AN=56;BaseQRankSum=10.108;DP=627;FS=1.171;HRun=13;HaplotypeScore=83.8959;InbreedingCoeff=0.7731;MQ=70.08;MQ0=0;MQRankSum=-1.295;QD=9.14;ReadPosRankSum=4.431;VQSLOD=1.7626;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:31:38.83:477,39,0	0/0:7,0:7:12.02:0,12,140	0/0:14,0:14:6.20:0,6,227	0/1:8,0:9:18.35:18,0,59	0/0:28,1:37:49.03:0,49,882	0/0:24,0:26:69.16:0,69,882	0/0:16,0:18:43.40:0,43,520	0/0:31,0:34:61.58:0,62,713	0/0:30,0:31:78.16:0,78,944	0/0:20,0:21:54.12:0,54,668	0/0:12,0:12:24.07:0,24,325	0/0:27,0:27:41.70:0,42,446	0/0:16,0:16:38.94:0,39,459	0/0:22,0:23:53.33:0,53,522	0/0:23,0:25:68.01:0,68,743	1/1:4,0:26:46.63:201,47,0	0/0:28,0:28:66.06:0,66,753	1/1:3,15:21:14.78:245,15,0	0/0:19,1:24:6.95:0,7,335	0/0:15,0:17:35.06:0,35,415	0/0:27,0:27:75.14:0,75,923	0/0:17,0:19:42.03:0,42,525	0/0:24,0:26:62.60:0,63,788	0/0:29,0:31:83.13:0,83,951	0/0:12,0:16:29.11:0,29,297	0/0:21,1:22:25.01:0,25,589	0/0:15,0:29:36.09:0,36,467	0/0:9,0:9:21.05:0,21,269
chr10	98974761	.	CCG	C	1009.03	PASS	AB=0.545;AC=5;AF=0.089;AN=56;BaseQRankSum=11.138;DP=509;FS=2.781;HRun=0;HaplotypeScore=75.7789;InbreedingCoeff=0.6956;MQ=77.32;MQ0=1;MQRankSum=-7.538;QD=17.70;ReadPosRankSum=4.690;VQSLOD=3.6543;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:2,10:12:17.16:148,0,17	0/0:10,0:10:27.09:0,27,504	0/0:14,0:14:28.77:0,29,593	0/0:11,0:11:26.68:0,27,494	0/0:13,0:13:14.88:0,15,289	0/0:17,0:17:48.15:0,48,867	0/0:36,0:36:99:0,105,2014	0/0:19,0:19:45.15:0,45,844	0/0:18,0:18:51.17:0,51,983	0/0:10,0:10:18.06:0,18,336	0/0:3,0:3:9.03:0,9,164	0/0:18,0:18:54.19:0,54,1040	0/0:22,0:22:60.19:0,60,1123	0/0:29,0:29:75.24:0,75,1413	0/0:29,0:29:81.26:0,81,1503	1/1:4,19:23:49.62:470,50,0	0/0:36,0:36:99:0,102,1943	1/1:2,20:22:26.75:519,27,0	0/0:16,0:16:36.12:0,36,657	0/0:4,0:4:6.02:0,6,101	0/0:43,0:42:99:0,117,2216	0/0:7,0:7:14.34:0,14,276	0/0:9,0:9:8.35:0,8,163	0/0:45,0:45:99:0,129,2460	0/0:10,0:10:24.08:0,24,430	0/0:11,0:11:27.09:0,27,496	0/0:15,0:15:45.14:0,45,834	0/0:7,0:7:21.07:0,21,405
chr10	98974765	.	AGG	A	1187.37	PASS	AB=0.684;AC=5;AF=0.089;AN=56;BaseQRankSum=11.557;DP=527;FS=0.542;HRun=2;HaplotypeScore=77.3165;InbreedingCoeff=0.5358;MQ=76.09;MQ0=1;MQRankSum=-6.730;QD=16.72;ReadPosRankSum=4.456;VQSLOD=1.2254;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:5,10:15:0.24:229,0,0	0/0:11,0:11:30.10:0,30,585	0/0:14,0:14:30.14:0,30,646	0/1:10,1:11:2.09:2,0,463	0/0:11,0:11:14.88:0,15,283	0/0:18,0:18:54.15:0,54,968	0/0:37,0:37:99:0,111,2211	0/0:21,0:21:51.10:0,51,951	0/0:21,0:21:60.21:0,60,1189	0/0:10,0:10:24.07:0,24,409	0/0:7,0:7:12.04:0,12,183	0/0:24,0:24:72.20:0,72,1400	0/0:19,0:19:57.20:0,57,1148	0/0:27,0:27:81.28:0,81,1623	0/0:25,0:25:75.24:0,75,1437	0/1:3,19:22:6.19:454,0,6	0/0:36,0:36:99:0,108,2182	1/1:3,20:23:36.59:618,37,0	0/0:14,0:14:42.12:0,42,736	0/0:4,0:4:5.99:0,6,82	0/0:49,0:48:99:0,138,2582	0/0:6,0:6:14.94:0,15,246	0/0:11,0:11:8.59:0,9,169	0/0:44,0:44:99:0,132,2646	0/0:13,0:13:33.09:0,33,513	0/0:11,0:11:30.09:0,30,547	0/0:16,0:16:48.16:0,48,955	0/0:7,0:7:21.07:0,21,414
chr10	98975353	.	TA	T	1212.86	PASS	AB=0.970;AC=5;AF=0.089;AN=56;BaseQRankSum=1.905;DP=495;FS=1.860;HRun=2;HaplotypeScore=62.7059;InbreedingCoeff=0.7409;MQ=70.11;MQ0=1;MQRankSum=-2.441;QD=13.04;ReadPosRankSum=0.925;VQSLOD=2.6204;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,13:38:85.11:793,85,0	0/0:8,0:8:18:0,18,181	0/1:30,1:15:16.65:17,0,194	0/0:13,0:13:11.71:0,12,215	0/0:24,0:24:52.22:0,52,518	0/0:17,0:17:50.43:0,50,493	0/0:12,0:12:33.05:0,33,349	0/0:32,0:32:80.62:0,81,772	0/0:12,0:12:30.05:0,30,319	0/0:22,0:22:48.08:0,48,502	0/0:21,0:21:45.42:0,45,423	0/0:10,0:10:14.92:0,15,119	0/0:10,0:10:20.99:0,21,196	0/0:10,0:10:20.93:0,21,188	0/0:15,0:15:38.61:0,39,368	0/0:23,0:23:51.54:0,52,294	0/0:27,0:27:59.38:0,59,593	1/1:14,9:22:51.81:532,52,0	0/0:19,0:19:54.01:0,54,560	0/0:14,0:14:32.03:0,32,327	0/0:13,0:13:23.05:0,23,308	0/0:8,0:8:15.02:0,15,161	0/0:16,0:16:38.97:0,39,379	0/0:6,0:6:10.53:0,11,111	0/0:15,0:15:33.60:0,34,326	0/0:15,1:16:29.25:0,29,285	0/0:28,0:28:60.37:0,60,652	0/0:11,0:11:26.36:0,26,258
chr10	98975762	.	C	CAGCGTTGTCACTGCAGG	9811.07	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.450;DP=659;FS=11.371;HRun=0;HaplotypeScore=269.7655;InbreedingCoeff=0.9940;MQ=83.12;MQ0=0;MQRankSum=-10.544;QD=112.77;ReadPosRankSum=1.695;VQSLOD=3.4491;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,13:33:51.18:4126,51,0	0/0:8,0:8:15.05:0,15,578	0/0:27,0:27:60.18:0,60,2013	0/0:23,0:23:51.16:0,51,1732	0/0:32,0:32:87.27:0,87,3673	0/0:18,0:18:54.15:0,54,2115	0/0:33,0:33:90.24:0,90,3314	0/0:27,0:27:63.20:0,63,2400	0/0:18,0:18:48.13:0,48,2039	0/0:19,0:19:51.18:0,51,2472	0/0:24,0:24:60.17:0,60,2400	0/0:30,0:30:78.24:0,78,3300	0/0:35,0:35:99:0,99,4561	0/0:16,0:16:42.12:0,42,1792	0/0:24,0:24:66.21:0,66,3020	1/1:3,0:32:33.11:2539,33,0	0/0:31,0:31:84.27:0,84,3622	1/1:9,6:22:39.13:3146,39,0	0/0:20,0:20:54.16:0,54,2235	0/0:11,0:11:30.10:0,30,1365	0/0:24,0:24:69.22:0,69,3002	0/0:23,0:23:51.16:0,51,2190	0/0:25,0:25:69.22:0,69,3043	0/0:31,0:31:87.25:0,87,3646	0/0:16,0:16:36.12:0,36,1744	0/0:19,0:19:51.18:0,51,2414	0/0:26,0:26:75.26:0,75,3437	0/0:12,0:12:36.10:0,36,1416
chr10	98976172	.	CGGGGGGGGG	C	2376.80	PASS	AB=0.690;AC=5;AF=0.096;AN=52;BaseQRankSum=3.151;DP=276;FS=2.967;HRun=18;HaplotypeScore=69.9523;InbreedingCoeff=0.3793;MQ=76.64;MQ0=12;MQRankSum=-2.631;QD=40.28;ReadPosRankSum=6.200;VQSLOD=0.8326;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,18:23:47.31:1157,47,0	0/0:5,0:5:6.02:0,6,174	0/0:38,0:21:47.55:0,48,814	0/0:35,0:14:24.94:0,25,333	./.	0/0:2,0:2:3.01:0,3,46	0/0:13,0:12:5.26:0,5,171	0/0:8,0:7:0:0,0,0	0/0:5,0:4:6.02:0,6,224	0/0:4,0:4:3.43:0,3,21	0/0:4,0:4:0:0,0,0	0/0:6,0:4:3.01:0,3,78	0/0:7,0:7:6.02:0,6,252	0/0:8,0:8:6.02:0,6,241	0/0:9,0:8:12.51:0,13,509	1/1:3,11:14:29.68:726,30,0	0/0:10,0:9:3.90:0,4,75	0/1:11,9:16:67.96:611,0,68	0/0:5,0:5:6.02:0,6,143	./.	0/0:12,0:10:6.02:0,6,78	0/0:3,0:3:0:0,0,0	0/0:2,0:2:0:0,0,0	0/0:9,0:8:6.02:0,6,254	0/0:3,0:3:0.47:0,0,2	0/0:7,0:7:6.01:0,6,119	0/0:9,0:6:9.03:0,9,281	0/0:10,0:10:6.02:0,6,89
chr10	98977042	.	CCAGCTACAGCAGACT	C	3430.43	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.852;DP=791;FS=3.447;HRun=0;HaplotypeScore=318.7609;InbreedingCoeff=0.9955;MQ=87.95;MQ0=0;MQRankSum=-9.043;QD=70.01;ReadPosRankSum=1.539;VQSLOD=3.0825;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,28:34:66.05:2486,66,0	0/0:7,0:7:21.07:0,21,1401	0/0:34,0:34:96.10:0,96,4944	0/0:25,0:25:63.13:0,63,3652	0/0:24,0:24:60.21:0,60,3936	0/0:21,0:21:63.22:0,63,4519	0/0:50,0:50:99:0,144,9443	0/0:34,0:34:99:0,99,5976	0/0:28,0:28:84.29:0,84,5638	0/0:26,0:26:75.25:0,75,4860	0/0:17,0:17:45.60:0,46,2784	0/0:43,0:43:99:0,117,7761	0/0:34,0:34:96.32:0,96,6555	0/0:34,0:34:96.33:0,96,6589	0/0:32,0:32:93.31:0,93,6476	0/0:33,0:33:93.32:0,93,5958	0/0:42,0:42:99:0,126,8553	1/1:4,11:15:21.07:945,21,0	0/0:17,0:17:48.12:0,48,2419	0/0:17,0:17:51.16:0,51,3586	0/0:60,0:60:99:0,172,11333	0/0:23,0:23:66.23:0,66,4279	0/0:12,0:12:30.10:0,30,2181	0/0:43,0:43:99:0,126,9001	0/0:17,0:17:48.16:0,48,3595	0/0:30,0:30:90.31:0,90,6352	0/0:25,0:25:75.24:0,75,4904	0/0:14,0:14:42.14:0,42,2832
chr10	98977824	.	CTTTTT	C	711.37	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.015;DP=266;FS=13.134;HRun=15;HaplotypeScore=53.7840;InbreedingCoeff=0.6662;MQ=73.77;MQ0=5;MQRankSum=-4.888;QD=22.23;ReadPosRankSum=1.686;VQSLOD=0.2497;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,7:13:26.99:383,27,0	0/0:3,0:3:6.02:0,6,140	0/0:16,0:8:15.05:0,15,224	0/0:12,0:10:9.25:0,9,172	0/0:11,0:10:21.07:0,21,486	0/0:19,0:21:54.18:0,54,1389	0/0:2,0:2:6.02:0,6,163	0/0:22,0:21:51.17:0,51,1208	0/0:4,0:4:9.03:0,9,251	0/0:4,0:4:6.02:0,6,167	0/0:2,0:2:3.01:0,3,69	0/0:9,0:9:21.07:0,21,572	0/0:4,0:4:9.03:0,9,236	0/0:4,0:4:9.03:0,9,227	0/0:5,0:5:15.05:0,15,384	1/1:3,6:9:23.96:310,24,0	0/0:25,0:27:51.18:0,51,1353	1/1:5,3:9:11.69:154,12,0	0/0:20,0:24:48.14:0,48,1101	0/0:6,0:7:12.04:0,12,309	0/0:4,0:4:9.03:0,9,243	0/0:3,0:3:8.39:0,8,175	0/0:5,0:5:3.01:0,3,84	0/0:4,0:4:9.01:0,9,163	0/0:6,0:8:21.07:0,21,482	0/0:12,0:12:30.10:0,30,791	0/0:9,0:9:21.07:0,21,537	0/0:5,0:5:12.04:0,12,260
chr10	98978446	.	ATG	A	1553.81	PASS	AB=0.889;AC=7;AF=0.125;AN=56;BaseQRankSum=9.782;DP=561;FS=6.752;HRun=0;HaplotypeScore=73.9211;InbreedingCoeff=0.7758;MQ=65.12;MQ0=1;MQRankSum=1.151;QD=21.29;ReadPosRankSum=3.209;VQSLOD=3.8455;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:57.17:687,57,0	0/0:4,0:4:12.04:0,12,190	0/0:31,0:24:50.70:0,51,759	0/0:25,0:19:29.46:0,29,417	0/0:17,0:17:48.16:0,48,762	0/0:23,0:23:54.18:0,54,871	0/0:8,0:8:21.07:0,21,329	0/0:29,0:29:51.17:0,51,811	0/0:24,1:25:26.81:0,27,897	0/0:26,0:26:61.72:0,62,899	0/0:11,0:11:30.10:0,30,480	0/0:22,0:22:54.18:0,54,862	0/0:18,0:18:42.14:0,42,664	0/0:17,0:17:51.17:0,51,819	0/1:14,2:16:33.69:34,0,444	1/1:2,20:22:50.69:618,51,0	0/0:34,0:34:49.96:0,50,1260	1/1:3,9:12:30.09:364,30,0	0/0:21,0:20:39.12:0,39,606	0/0:18,0:18:48.16:0,48,757	0/0:24,1:25:8.75:0,9,615	0/0:7,0:7:21.05:0,21,314	0/0:12,0:12:36.12:0,36,580	0/0:13,0:13:30.09:0,30,459	0/0:25,0:25:51.14:0,51,755	0/0:32,2:34:8.47:0,8,1123	0/0:30,2:30:8.52:0,9,1122	0/0:11,0:11:30.10:0,30,484
chr10	98978532	.	ATTGTTTTTTT	A	1936.32	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=7.207;DP=389;FS=7.139;HRun=0;HaplotypeScore=114.3484;InbreedingCoeff=0.7711;MQ=69.27;MQ0=3;MQRankSum=-4.610;QD=21.05;ReadPosRankSum=-0.716;VQSLOD=1.9030;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:13:0:0,0,0	0/0:3,0:3:5.99:0,6,265	0/0:22,0:9:15.83:0,16,277	0/0:25,0:15:21.13:0,21,296	0/0:12,0:12:24.52:0,25,767	0/0:20,0:20:51.16:0,51,1969	0/0:11,0:11:33.02:0,33,1127	1/1:23,19:42:56.72:1103,57,0	0/0:9,0:9:18.04:0,18,788	0/0:20,0:20:45.05:0,45,1588	0/0:11,0:11:21.06:0,21,913	0/0:11,0:11:29.99:0,30,969	0/0:10,0:10:18.02:0,18,559	0/0:4,0:4:9.03:0,9,401	0/0:4,0:4:9.01:0,9,315	0/0:18,0:18:20.87:0,21,1176	0/0:34,0:33:75.01:0,75,3162	0/1:9,0:7:0:0,0,0	0/0:19,0:19:42.12:0,42,1454	0/0:7,0:7:18.06:0,18,683	0/0:13,0:13:24.05:0,24,910	0/0:5,0:4:6:0,6,170	0/0:3,0:3:6.02:0,6,171	0/0:7,0:7:14.97:0,15,479	0/0:20,0:19:51.10:0,51,1869	1/1:3,16:19:35.68:626,36,0	0/0:9,0:9:14.99:0,15,497	1/1:1,7:8:12.04:343,12,0
chr10	98978652	.	G	GAA	1318.82	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-5.672;DP=284;FS=4.202;HRun=3;HaplotypeScore=33.0883;InbreedingCoeff=0.8954;MQ=65.64;MQ0=0;MQRankSum=-1.702;QD=42.54;ReadPosRankSum=-0.019;VQSLOD=2.7839;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:21.07:424,21,0	0/0:5,0:5:15.05:0,15,244	0/0:10,0:8:8.79:0,9,173	0/0:6,0:4:9:0,9,119	0/0:12,0:12:36.12:0,36,587	0/0:16,0:16:48.16:0,48,782	0/0:8,0:8:24.06:0,24,354	0/0:25,0:25:72.18:0,72,1097	0/0:6,0:6:18.06:0,18,293	0/0:10,0:10:30.09:0,30,464	0/0:9,0:9:27.08:0,27,415	0/0:9,0:9:27.09:0,27,440	0/0:9,0:9:27.09:0,27,440	0/0:6,0:6:18.06:0,18,293	0/0:5,0:5:15.05:0,15,243	1/1:1,10:11:24.08:487,24,0	0/0:12,0:12:33.11:0,33,534	1/1:0,12:12:27.09:548,27,0	0/0:11,0:10:30.08:0,30,438	0/0:11,0:11:33.09:0,33,510	0/0:13,0:13:39.09:0,39,585	0/0:2,0:2:6.02:0,6,98	0/0:5,0:5:15.05:0,15,245	0/0:15,0:15:45.14:0,45,708	0/0:15,0:15:45.15:0,45,734	0/0:11,0:11:33.11:0,33,536	0/0:17,0:16:51.17:0,51,831	0/0:5,0:5:15.05:0,15,244
chr10	98978946	.	TGC	T	522.68	PASS	AB=0.522;AC=1;AF=0.018;AN=56;BaseQRankSum=6.599;DP=621;FS=5.413;HRun=0;HaplotypeScore=73.9173;InbreedingCoeff=0.5053;MQ=59.08;MQ0=4;MQRankSum=0.808;QD=21.78;ReadPosRankSum=2.513;VQSLOD=3.3655;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:75.18:0,75,1208	0/0:6,0:6:15.05:0,15,262	0/0:21,0:8:8.20:0,8,58	0/0:17,0:6:14.88:0,15,154	0/0:18,0:18:51.17:0,51,885	0/0:21,0:21:54.03:0,54,844	0/0:26,0:26:72.16:0,72,1167	0/0:28,0:28:66.09:0,66,1018	0/0:16,0:16:42.14:0,42,723	0/0:19,0:19:57.15:0,57,938	0/0:9,0:9:24.08:0,24,417	0/0:32,0:32:87.13:0,87,1407	0/0:17,0:17:48.01:0,48,771	0/0:28,0:28:78.22:0,78,1304	0/0:24,0:24:69.21:0,69,1147	0/1:2,22:24:1.36:597,0,1	0/0:32,0:32:90.31:0,90,1573	0/0:26,0:26:75.13:0,75,1239	0/0:22,0:22:54.15:0,54,912	0/0:14,0:14:39.09:0,39,650	0/0:40,0:40:99:0,108,1877	0/0:23,0:23:66.20:0,66,1099	0/0:9,0:9:27.09:0,27,472	0/0:23,0:23:66.18:0,66,1122	0/0:25,0:25:69.24:0,69,1194	0/0:37,0:37:99:0,105,1812	0/0:24,0:24:63.09:0,63,1032	0/0:9,0:9:24.08:0,24,377
chr10	98979346	.	C	CTTCT	599.68	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.109;DP=426;FS=8.388;HRun=0;HaplotypeScore=71.3125;InbreedingCoeff=0.8305;MQ=58.10;MQ0=12;MQRankSum=-4.230;QD=74.96;ReadPosRankSum=1.533;VQSLOD=5.1203;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:34:84.29:0,84,1757	0/0:5,0:5:12.04:0,12,251	0/0:13,0:10:30.09:0,30,589	0/0:13,0:9:27.06:0,27,448	0/0:13,0:13:27.09:0,27,564	0/0:17,0:17:45.11:0,45,899	0/0:17,0:17:45.15:0,45,926	0/0:37,0:35:87.19:0,87,1778	0/0:13,0:12:33.11:0,33,690	0/0:14,0:14:39.13:0,39,781	0/0:4,0:4:9.03:0,9,188	0/0:18,0:18:54.19:0,54,1128	0/0:12,0:11:30.10:0,30,627	0/0:16,0:16:42.13:0,42,833	0/0:20,0:20:51.18:0,51,1065	1/1:0,8:8:24.08:693,24,0	0/0:25,0:24:72.23:0,72,1456	0/0:16,0:14:42.14:0,42,880	0/0:16,0:15:45.15:0,45,931	0/0:4,0:3:9.03:0,9,189	0/0:23,0:23:63.22:0,63,1318	0/0:4,0:4:12.04:0,12,251	0/0:12,0:12:24.07:0,24,460	0/0:16,0:15:42.11:0,42,784	0/0:10,0:10:29.93:0,30,580	0/0:19,0:18:51.18:0,51,1063	0/0:14,0:14:39.13:0,39,812	0/0:8,0:7:15.05:0,15,314
chr10	98979380	.	AC	A	62.84	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=3.818;DP=411;FS=1.822;HRun=3;HaplotypeScore=50.5877;InbreedingCoeff=0.7963;MQ=40.14;MQ0=51;MQRankSum=-2.979;QD=15.71;ReadPosRankSum=0.614;VQSLOD=2.9888;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:29:78.10:0,78,1029	0/0:6,0:6:15.05:0,15,215	0/0:2,0:2:5.99:0,6,59	./.	0/0:16,0:15:27.02:0,27,386	0/0:18,0:16:39.13:0,39,559	0/0:16,0:15:36.08:0,36,493	0/0:36,0:21:51.06:0,51,632	0/0:11,0:10:21.07:0,21,302	0/0:10,0:9:21.07:0,21,302	0/0:9,0:8:18.06:0,18,247	0/0:13,0:13:36.12:0,36,513	0/0:7,0:6:18.06:0,18,259	0/0:15,0:15:39.13:0,39,561	0/0:22,0:22:57.15:0,57,791	1/1:0,4:4:12.04:148,12,0	0/0:27,1:23:26.01:0,26,802	0/0:19,0:14:33.05:0,33,424	0/0:17,0:10:24.08:0,24,345	0/0:6,0:6:15.05:0,15,215	0/0:23,0:18:39.13:0,39,558	0/0:4,0:4:12.04:0,12,171	0/0:16,0:15:39.13:0,39,557	0/0:17,0:12:27.09:0,27,388	0/0:13,0:10:30.09:0,30,413	0/0:16,0:12:30.10:0,30,432	0/0:16,0:15:39.10:0,39,539	0/0:10,0:7:17.87:0,18,259
chr10	98980644	.	AG	A	936.40	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.752;DP=716;FS=0.000;HRun=6;HaplotypeScore=76.9431;InbreedingCoeff=0.9896;MQ=74.57;MQ0=1;MQRankSum=0.144;QD=25.31;ReadPosRankSum=1.977;VQSLOD=3.9012;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,156,1973	0/0:9,0:9:24.04:0,24,283	0/0:33,1:30:52.47:0,52,770	0/0:38,1:33:52.81:0,53,657	0/0:15,0:15:36.07:0,36,424	0/0:18,0:18:42.14:0,42,550	0/0:14,0:14:41.96:0,42,509	0/0:21,0:21:44.92:0,45,578	0/0:20,0:20:57.19:0,57,750	0/0:24,0:24:60.18:0,60,776	0/0:21,0:21:63.16:0,63,772	0/0:29,0:29:81.25:0,81,1046	0/0:25,0:25:69.22:0,69,902	0/0:27,0:27:81.25:0,81,1051	0/0:25,0:25:72.23:0,72,930	1/1:3,34:37:96.24:1031,96,0	0/0:40,0:40:99:0,105,1400	0/0:24,0:24:72.19:0,72,925	0/0:14,0:14:36.12:0,36,470	0/0:20,0:20:51.12:0,51,620	0/0:34,0:34:96.27:0,96,1209	0/0:29,0:29:84.26:0,84,1086	0/0:13,0:13:36.09:0,36,443	0/0:40,0:40:99:0,111,1419	0/0:21,0:21:57.14:0,57,694	0/0:30,0:30:66.21:0,66,855	0/0:30,0:30:87.28:0,87,1144	0/0:6,0:6:18.06:0,18,237
chr10	98982318	.	TTG	T	1013.02	PASS	AB=0.888;AC=22;AF=0.407;AN=54;BaseQRankSum=8.635;DP=946;FS=7.935;HRun=0;HaplotypeScore=143.8167;InbreedingCoeff=-0.5482;MQ=70.57;MQ0=9;MQRankSum=1.377;QD=1.41;ReadPosRankSum=1.666;VQSLOD=2.2453;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:53:7.90:41,8,0	0/1:9,0:9:1.85:2,0,144	0/0:32,0:26:3.01:0,3,43	0/0:32,0:25:3.01:0,3,44	0/1:27,6:33:53.69:54,0,308	0/1:36,1:37:30.03:30,0,687	0/1:31,5:35:46.34:46,0,592	0/0:27,0:27:35.96:0,36,444	0/1:26,3:30:33.12:33,0,534	0/1:51,6:57:99:115,0,672	0/0:14,2:16:9.03:0,9,135	0/1:44,4:48:53.41:53,0,803	0/1:31,7:38:99:153,0,748	0/0:31,1:32:16.76:0,17,768	0/1:35,3:38:15.92:16,0,592	0/1:28,10:38:99:252,0,553	0/1:37,3:41:46.93:47,0,767	0/1:21,0:29:24.36:24,0,48	./.	0/1:28,2:30:17.54:18,0,329	0/0:61,0:60:95.13:0,95,1199	0/1:31,2:34:3.75:4,0,449	0/1:24,2:26:30.95:31,0,367	0/1:34,7:41:53.72:54,0,622	0/1:23,3:27:36.01:36,0,501	0/1:36,4:40:50.53:51,0,556	0/1:17,5:22:91.96:92,0,384	0/1:8,1:9:12.51:13,0,203
chr10	98982421	.	A	AGT	2445.72	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.011;DP=1188;FS=11.386;HRun=0;HaplotypeScore=174.8801;InbreedingCoeff=0.9990;MQ=60.82;MQ0=3;MQRankSum=0.349;QD=39.45;ReadPosRankSum=1.599;VQSLOD=4.1941;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:72,0:72:99:0,156,1981	0/0:16,0:16:48.13:0,48,600	0/0:57,0:41:69.61:0,70,1076	0/0:65,0:51:91.13:0,91,1269	0/0:21,0:21:54.15:0,54,666	0/0:40,0:40:99:0,99,1201	0/0:32,0:32:67.28:0,67,989	0/0:51,0:50:99:0,112,1381	0/0:49,0:49:99:0,132,1683	0/0:51,0:51:99:0,141,1780	0/0:29,0:29:72.19:0,72,896	0/0:59,0:59:99:0,162,2068	0/0:55,0:55:99:0,150,1882	0/0:40,0:40:99:0,114,1463	0/0:58,0:58:99:0,156,1979	1/1:4,58:62:99:2541,118,0	0/0:35,0:35:93.30:0,93,1195	0/0:33,0:33:80.73:0,81,956	0/0:22,0:22:54.17:0,54,682	0/0:30,0:30:78.25:0,78,1003	0/0:91,0:91:99:0,235,2933	0/0:37,0:37:99:0,99,1235	0/0:39,0:40:99:0,107,1339	0/0:47,0:46:99:0,114,1442	0/0:20,0:20:60.19:0,60,772	0/0:44,0:44:99:0,111,1415	0/0:18,0:17:48.16:0,48,617	0/0:13,0:13:27.03:0,27,301
chr10	98982953	.	G	GTTCT	1923.22	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.311;DP=660;FS=0.000;HRun=0;HaplotypeScore=103.1284;InbreedingCoeff=0.9975;MQ=85.04;MQ0=1;MQRankSum=-2.385;QD=58.28;ReadPosRankSum=0.922;VQSLOD=5.1021;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,2042	0/0:12,0:12:36.12:0,36,659	0/0:25,0:24:60.62:0,61,1035	0/0:22,0:22:56.87:0,57,1028	0/0:42,0:42:99:0,120,2183	0/0:25,0:24:69.21:0,69,1243	0/0:17,0:17:51.17:0,51,951	0/0:31,0:31:78.19:0,78,1294	0/0:12,0:12:36.11:0,36,629	0/0:24,0:24:69.24:0,69,1278	0/0:29,0:29:84.27:0,84,1535	0/0:12,0:12:33.11:0,33,606	0/0:19,0:19:54.19:0,54,1008	0/0:18,0:18:51.17:0,51,952	0/0:24,0:24:72.23:0,72,1291	1/1:5,26:33:25.28:2017,25,0	0/0:15,0:15:39.13:0,39,728	0/0:12,0:12:33.11:0,33,616	0/0:17,0:17:45.15:0,45,813	0/0:28,0:28:81.25:0,81,1450	0/0:20,0:20:60.18:0,60,1087	0/0:33,0:33:87.30:0,87,1624	0/0:40,0:40:99:0,117,2160	0/0:15,0:15:45.12:0,45,776	0/0:30,0:30:90.31:0,90,1680	0/0:26,0:26:75.26:0,75,1377	0/0:26,0:26:78.25:0,78,1421	0/0:14,0:14:39.13:0,39,728
chr10	98984096	.	T	TC	722.45	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.567;DP=670;FS=5.624;HRun=4;HaplotypeScore=68.2475;InbreedingCoeff=0.9818;MQ=78.59;MQ0=0;MQRankSum=-1.980;QD=27.79;ReadPosRankSum=0.787;VQSLOD=3.1652;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.27:0,96,1087	0/0:8,0:8:24.07:0,24,272	0/0:20,0:20:49.98:0,50,511	0/0:20,0:19:33.05:0,33,432	0/0:16,0:16:39.10:0,39,434	0/0:18,0:18:51.15:0,51,578	0/0:49,0:49:99:0,141,1578	0/0:25,0:25:63.17:0,63,707	0/0:22,0:22:60.15:0,60,670	0/0:22,0:22:66.18:0,66,741	0/0:18,0:18:48.12:0,48,534	0/0:37,0:37:99:0,108,1225	0/0:22,0:22:66.19:0,66,748	0/0:26,0:26:72.20:0,72,817	0/0:26,0:26:75.21:0,75,850	1/1:3,23:26:60.20:817,60,0	0/0:33,0:33:90.25:0,90,1018	0/0:26,0:26:75.21:0,75,850	0/0:21,0:21:57.12:0,57,631	0/0:15,0:15:42.12:0,42,471	0/0:57,0:57:99:0,159,1802	0/0:22,0:22:63.18:0,63,713	0/0:12,0:12:33.08:0,33,364	0/0:21,0:21:63.16:0,63,703	0/0:18,0:18:51.14:0,51,575	0/0:34,0:34:99:0,102,1156	0/0:16,0:16:39.11:0,39,442	0/0:5,0:5:15.04:0,15,170
chr10	98984746	.	ATG	A	763.25	PASS	AB=0.905;AC=22;AF=0.423;AN=52;BaseQRankSum=7.848;DP=720;FS=0.000;HRun=0;HaplotypeScore=92.2939;InbreedingCoeff=-0.2019;MQ=57.06;MQ0=9;MQRankSum=-0.853;QD=1.66;ReadPosRankSum=2.861;VQSLOD=1.3139;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:40:11.36:56,11,0	0/1:5,1:7:34.86:35,0,78	./.	./.	0/1:18,2:20:14.72:15,0,154	0/0:19,0:19:24.08:0,24,352	0/0:19,0:34:11.64:0,12,123	0/0:29,1:29:2.13:0,2,5	0/1:20,2:22:41.41:41,0,213	0/1:31,2:35:54.77:55,0,159	0/1:14,1:15:11.70:12,0,206	0/1:33,2:34:14.68:15,0,206	0/1:15,1:17:34.82:35,0,78	0/0:26,0:26:27.05:0,27,353	0/1:35,2:36:37.56:38,0,362	0/0:17,0:33:26.68:0,27,284	0/1:21,4:26:46.54:47,0,300	1/1:11,0:22:31.72:154,32,0	0/0:22,0:22:3.90:0,4,47	0/1:20,0:19:23.69:24,0,80	0/1:55,5:60:64.76:65,0,651	0/1:22,1:25:28.79:29,0,156	0/1:20,3:23:11.68:12,0,224	0/0:30,4:35:18.39:0,18,633	0/0:17,0:17:1.01:0,1,139	1/1:21,0:22:1.96:12,2,0	0/1:13,1:15:33.49:38,0,33	1/1:9,10:20:23.90:243,24,0
chr10	98985285	.	CT	C	684.61	PASS	AB=0.915;AC=9;AF=0.161;AN=56;BaseQRankSum=6.084;DP=416;FS=0.608;HRun=12;HaplotypeScore=42.0412;InbreedingCoeff=0.5527;MQ=59.86;MQ0=9;MQRankSum=0.533;QD=7.96;ReadPosRankSum=3.519;VQSLOD=1.6220;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:17:29.87:232,30,0	0/0:12,0:11:30.06:0,30,304	0/0:12,0:7:6.79:0,7,48	0/0:13,0:4:2.60:0,3,10	0/0:23,0:23:30.03:0,30,466	0/0:14,1:15:9.84:0,10,281	0/1:7,1:8:5.15:5,0,134	0/0:29,0:27:51.09:0,51,511	0/0:7,0:6:12.02:0,12,119	0/0:20,0:20:37.29:0,37,446	0/0:17,0:16:33.07:0,33,334	0/0:12,0:13:23.86:0,24,215	0/0:9,1:10:0.81:0,1,190	0/0:11,0:10:27.04:0,27,267	0/0:10,0:10:23.97:0,24,222	1/1:1,13:13:32.87:255,33,0	0/0:21,0:21:31.60:0,32,436	1/1:2,18:20:37.04:329,37,0	0/0:21,0:21:36.63:0,37,446	0/0:25,0:25:57.07:0,57,567	0/0:8,0:8:12.02:0,12,120	0/0:6,0:6:9.48:0,9,86	0/0:5,0:8:14.08:0,14,113	0/0:5,0:5:9.02:0,9,91	0/1:13,1:13:0.38:0,0,165	0/0:21,0:21:51.05:0,51,500	0/0:21,0:22:50.92:0,51,489	0/1:11,1:10:8.22:8,0,100
chr10	98986777	.	GAT	G	702.07	PASS	AB=0.923;AC=3;AF=0.054;AN=56;BaseQRankSum=5.517;DP=469;FS=0.000;HRun=0;HaplotypeScore=54.1511;InbreedingCoeff=0.6489;MQ=65.98;MQ0=0;MQRankSum=1.571;QD=20.06;ReadPosRankSum=2.077;VQSLOD=3.6424;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.24:0,84,1427	0/0:8,0:8:21.07:0,21,381	0/0:6,0:6:18.04:0,18,246	0/0:10,0:10:24.04:0,24,389	0/0:20,0:20:54.15:0,54,917	0/0:22,0:22:63.20:0,63,1112	0/0:9,0:9:27.09:0,27,489	0/0:34,0:34:96.22:0,96,1536	0/1:11,1:12:11.10:11,0,464	0/0:18,0:18:54.16:0,54,900	0/0:17,0:17:41.96:0,42,597	0/0:8,0:8:21.06:0,21,351	0/0:11,0:11:33.09:0,33,531	0/0:13,0:13:33.05:0,33,478	0/0:12,0:12:36.07:0,36,534	1/1:2,21:23:54.18:794,54,0	0/0:36,0:35:93.17:0,93,1603	0/0:24,0:24:63.22:0,63,1134	0/0:25,0:25:69.14:0,69,1072	0/0:16,0:16:48.14:0,48,806	0/0:8,0:8:21.05:0,21,350	0/0:8,0:8:18.05:0,18,297	0/0:13,0:13:36.05:0,36,518	0/0:10,0:10:27.04:0,27,397	0/0:24,0:24:66.19:0,66,1136	0/0:25,0:25:72.13:0,72,1154	0/0:20,0:20:60.12:0,60,934	0/0:8,0:8:24.07:0,24,404
chr10	98988134	.	GGT	G	1180.30	PASS	AB=0.531;AC=5;AF=0.089;AN=56;BaseQRankSum=5.767;DP=386;FS=3.428;HRun=0;HaplotypeScore=51.4989;InbreedingCoeff=0.7213;MQ=83.45;MQ0=1;MQRankSum=-2.928;QD=25.66;ReadPosRankSum=3.414;VQSLOD=4.2928;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:36.12:544,36,0	0/0:2,0:2:6.01:0,6,79	0/0:20,0:20:39.02:0,39,833	0/0:19,0:18:49.73:0,50,667	0/0:9,0:9:21.07:0,21,366	0/0:13,0:13:39.12:0,39,649	0/0:22,0:22:66.16:0,66,1043	0/0:15,0:15:36.11:0,36,599	0/0:13,0:13:39.11:0,39,651	0/0:12,0:12:36.12:0,36,639	0/0:6,0:6:18.06:0,18,305	0/0:15,0:15:43.37:0,43,720	0/0:12,0:12:36.11:0,36,616	0/0:19,0:19:50.52:0,51,830	0/0:13,0:13:39.03:0,39,603	0/1:2,15:16:26.40:336,0,26	0/0:34,0:33:99:0,101,1630	1/1:1,11:12:30.07:430,30,0	0/0:8,0:8:21.04:0,21,306	0/0:9,0:9:24.05:0,24,360	0/0:23,0:23:63.15:0,63,1006	0/0:10,0:10:30.10:0,30,535	0/0:13,0:13:39.10:0,39,637	0/0:11,0:11:32.60:0,33,542	0/0:12,0:12:36.12:0,36,641	0/0:12,0:12:36.11:0,36,607	0/0:15,0:15:45.15:0,45,771	0/0:3,0:3:9.03:0,9,162
chr10	98988804	.	ACAAGCTTGAGT	A	3886.77	PASS	AB=0.576;AC=5;AF=0.089;AN=56;BaseQRankSum=10.084;DP=712;FS=0.601;HRun=0;HaplotypeScore=223.2243;InbreedingCoeff=0.7798;MQ=87.08;MQ0=0;MQRankSum=-7.987;QD=74.75;ReadPosRankSum=-0.266;VQSLOD=3.3315;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,5585	0/0:12,0:12:36.12:0,36,1843	0/0:28,0:28:66.23:0,66,3186	0/0:24,0:24:72.21:0,72,3449	0/0:23,0:23:66.23:0,66,3535	0/0:18,0:18:54.19:0,54,2784	0/0:34,0:34:93.29:0,93,4758	1/1:6,17:23:51.16:1608,51,0	0/0:24,0:24:63.22:0,63,3545	0/0:30,0:30:87.30:0,87,4631	0/0:25,0:25:75.24:0,75,3669	0/0:21,0:21:63.22:0,63,3441	0/0:29,0:29:84.29:0,84,4481	0/0:27,0:27:72.25:0,72,3951	0/0:31,0:31:87.28:0,87,4757	0/0:31,0:31:93.32:0,93,5171	0/0:37,0:37:99:0,111,5748	0/0:20,0:20:54.19:0,54,2642	0/0:17,0:17:51.18:0,51,2603	0/0:33,0:33:93.32:0,93,5079	0/0:31,0:31:87.30:0,87,4570	0/0:25,0:25:69.24:0,69,3783	0/0:24,0:24:63.20:0,63,3382	0/0:35,0:35:99:0,99,5618	0/0:22,0:21:57.20:0,57,3073	0/1:5,14:19:99:1335,0,126	0/0:23,0:23:69.24:0,69,3907	1/1:1,9:10:27.09:944,27,0
chr10	98989732	.	GAAAA	G	1034.51	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.927;DP=485;FS=4.632;HRun=14;HaplotypeScore=87.0752;InbreedingCoeff=0.9307;MQ=55.17;MQ0=41;MQRankSum=-0.005;QD=16.42;ReadPosRankSum=5.777;VQSLOD=1.3080;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,23:28:43.33:579,43,0	0/0:7,0:7:18.04:0,18,315	0/0:15,0:7:17.85:0,18,160	0/0:21,0:9:18.36:0,18,188	0/0:13,0:13:36.05:0,36,563	0/0:16,0:12:32.86:0,33,607	0/0:16,0:17:48.15:0,48,917	0/0:22,0:22:36.06:0,36,556	0/0:12,0:12:30.01:0,30,456	0/0:22,0:25:63.65:0,64,1043	0/0:10,0:13:29.99:0,30,425	0/0:8,0:8:24.08:0,24,497	0/0:7,0:7:4.72:0,5,166	0/0:10,0:9:21.07:0,21,422	0/0:18,0:16:39.13:0,39,814	1/1:0,13:14:22.26:300,22,0	0/0:29,0:24:57.08:0,57,1031	1/1:5,14:16:21.04:297,21,0	0/0:16,0:12:30.08:0,30,545	0/0:12,0:13:27.51:0,28,393	0/0:13,0:10:18.04:0,18,323	0/0:13,0:13:14.95:0,15,202	0/0:10,0:9:18.95:0,19,379	0/0:30,0:22:36.71:0,37,689	0/0:25,0:23:64.66:0,65,1130	0/0:19,0:21:60.14:0,60,1146	0/0:18,0:16:36.04:0,36,646	0/0:13,0:12:26.96:0,27,517
chr10	98989900	.	A	AC	2091.02	PASS	AB=0.500;AC=27;AF=0.794;AN=34;BaseQRankSum=-3.693;DP=210;FS=1.801;HRun=0;HaplotypeScore=129.5583;InbreedingCoeff=0.3335;MQ=30.38;MQ0=0;MQRankSum=0.424;QD=14.52;ReadPosRankSum=-1.853;VQSLOD=4.5298;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:14:1.58:9,2,0	./.	./.	./.	./.	1/1:0,9:9:3.01:46,3,0	./.	1/1:0,16:16:48.16:759,48,0	./.	1/1:0,9:9:23.78:374,24,0	0/1:0,9:9:0:0,0,0	1/1:0,12:12:3.01:38,3,0	1/1:0,14:13:3.01:48,3,0	./.	./.	1/1:0,9:10:2.37:8,2,0	1/1:0,3:3:3.01:37,3,0	1/1:0,3:4:3.22:50,3,0	1/1:0,7:7:9.35:168,9,0	0/1:0,9:9:0:0,0,0	./.	0/0:0,5:5:0:0,0,0	./.	./.	0/1:0,6:7:0:0,0,0	1/1:0,12:12:21.35:376,21,0	1/1:0,9:9:19.61:256,20,0	0/0:0,2:2:2.04:0,2,6
chr10	98989952	.	GGA	G	62.16	PASS	AB=0.958;AC=14;AF=0.538;AN=26;BaseQRankSum=0.337;DP=206;FS=2.158;HRun=0;HaplotypeScore=82.7182;InbreedingCoeff=0.2955;MQ=30.04;MQ0=5;MQRankSum=-1.395;QD=0.91;ReadPosRankSum=0.144;VQSLOD=1.4737;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:8:1.25:0,1,3	./.	./.	./.	./.	0/1:7,0:7:0:0,0,0	1/1:6,3:9:5.97:45,6,0	0/0:9,0:8:0:0,0,0	./.	0/0:11,0:11:5.93:0,6,40	./.	0/1:8,1:11:20.24:24,0,20	0/0:11,0:11:8.86:0,9,96	1/1:11,0:11:2.97:20,3,0	./.	1/1:12,0:12:2.68:11,3,0	1/1:4,1:4:2.67:29,3,0	./.	./.	1/1:3,0:4:2.88:15,3,0	./.	./.	./.	./.	0/0:6,0:5:2.97:0,3,20	./.	1/1:5,0:8:2.84:14,3,0	./.
chr10	98990001	.	GAGAA	G	179.12	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=0.542;DP=421;FS=0.000;HRun=0;HaplotypeScore=92.4121;InbreedingCoeff=0.7547;MQ=57.18;MQ0=16;MQRankSum=-1.113;QD=3.04;ReadPosRankSum=1.453;VQSLOD=1.3977;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:9.66:94,10,0	0/0:7,0:7:19.50:0,20,156	0/0:19,0:13:29.17:0,29,313	0/0:21,0:13:23.26:0,23,255	0/0:10,0:10:26.92:0,27,222	0/0:14,0:14:36.20:0,36,263	0/0:18,0:16:44.71:0,45,374	0/0:27,0:24:68.66:0,69,534	0/0:10,0:10:20.80:0,21,144	0/0:22,0:22:31.09:0,31,392	0/0:8,0:8:11.98:0,12,102	0/0:22,0:22:53.54:0,54,448	0/0:11,0:10:25.45:0,25,256	0/0:16,0:15:38.84:0,39,324	0/0:17,0:16:38.78:0,39,313	1/1:4,15:19:3.01:55,3,0	0/0:17,0:17:46.63:0,47,324	1/1:12,0:9:20.85:155,21,0	0/0:12,0:10:23.96:0,24,205	0/1:9,0:9:2.01:2,0,158	0/0:18,0:18:32.90:0,33,271	0/0:19,0:19:43.67:0,44,355	0/0:7,0:5:14.95:0,15,121	0/0:15,0:14:11.85:0,12,89	0/0:13,0:13:26.66:0,27,223	0/0:18,0:17:50.52:0,51,379	0/0:17,0:16:11.78:0,12,233	0/0:4,0:4:9:0,9,80
chr10	98990113	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTA	G	181.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.017;DP=591;FS=6.285;HRun=0;HaplotypeScore=404.8381;InbreedingCoeff=0.4395;MQ=57.68;MQ0=11;MQRankSum=-2.455;QD=15.09;ReadPosRankSum=-2.118;VQSLOD=0.3875;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:15.02:0,15,349	0/0:7,0:7:7.79:0,8,775	0/0:23,0:10:9.50:0,10,252	0/0:23,0:15:3.01:0,3,109	0/0:17,0:17:27.09:0,27,1942	0/0:12,0:11:9.03:0,9,1022	0/0:31,0:30:27.07:0,27,2427	0/0:30,0:28:48.15:0,48,2068	0/0:14,0:13:21.05:0,21,1897	0/0:27,0:27:51.18:0,51,5192	0/0:14,0:13:23.95:0,24,1950	0/0:23,0:23:28.14:0,28,3669	0/0:20,0:20:27.09:0,27,3038	0/0:18,0:18:24.54:0,25,2438	0/0:15,0:15:17.97:0,18,1555	1/1:7,5:12:3.01:258,3,0	0/0:38,0:37:76.47:0,76,8969	0/0:26,0:26:37.66:0,38,1371	0/0:24,0:21:37.89:0,38,3004	0/0:13,0:13:22.63:0,23,2431	0/0:66,0:65:83.16:0,83,8305	0/0:16,0:16:12.04:0,12,1276	0/0:10,0:9:4.48:0,4,881	0/0:20,0:18:21.05:0,21,2124	0/0:15,0:13:12.04:0,12,1464	0/0:26,0:25:44.93:0,45,2936	0/0:11,0:11:18.06:0,18,2506	0/0:11,0:11:18.06:0,18,907
chr10	98990127	.	GTGTGTGTGTGTGTGTGTGTA	G	687.51	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=0.029;DP=537;FS=10.140;HRun=0;HaplotypeScore=228.6357;InbreedingCoeff=0.3405;MQ=50.08;MQ0=14;MQRankSum=-2.127;QD=4.38;ReadPosRankSum=-2.179;VQSLOD=1.2893;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,18:26:2.63:74,3,0	0/0:4,0:4:7.38:0,7,411	1/1:19,0:6:3:29,3,0	0/0:12,0:4:3:0,3,28	0/0:15,0:15:15.03:0,15,821	0/0:8,0:7:8.97:0,9,572	0/0:27,0:27:23.17:0,23,1279	0/1:29,0:28:99:112,0,219	0/0:15,0:14:23.31:0,23,930	0/0:26,0:25:45.15:0,45,2704	0/0:12,0:11:3.96:0,4,808	0/0:22,0:22:36.03:0,36,2065	0/0:15,0:15:27.56:0,28,1668	0/0:14,0:14:21.07:0,21,1235	0/0:15,0:15:13.43:0,13,828	1/1:7,0:7:3.01:140,3,0	0/0:38,0:37:42.74:0,43,4836	1/1:23,0:22:30:375,30,0	0/0:20,0:18:24.64:0,25,1599	0/1:13,0:12:21.69:22,0,1331	0/0:63,0:62:21.26:0,21,4334	0/0:17,0:17:9.03:0,9,658	0/0:8,0:7:5.07:0,5,527	0/0:25,0:22:21.07:0,21,1397	0/0:12,0:9:15.05:0,15,886	0/1:30,0:29:73.84:74,0,1097	0/0:12,0:12:18.06:0,18,1429	0/1:8,0:8:10.43:10,0,337
chr10	98992127	.	C	CAAAG	7991.73	PASS	AB=0.564;AC=11;AF=0.196;AN=56;BaseQRankSum=-1.358;DP=614;FS=13.887;HRun=0;HaplotypeScore=97.7914;InbreedingCoeff=0.8861;MQ=87.78;MQ0=0;MQRankSum=-4.864;QD=51.56;ReadPosRankSum=1.441;VQSLOD=4.8187;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,44:50:99:2771,99,0	0/0:9,0:9:27.09:0,27,553	0/0:24,0:24:69.20:0,69,1275	0/0:22,0:22:66.22:0,66,1244	0/0:15,0:15:42.14:0,42,867	0/0:19,0:19:57.20:0,57,1181	0/0:22,0:22:66.23:0,66,1371	1/1:8,0:32:49.20:1064,49,0	0/0:21,0:21:60.19:0,60,1190	0/0:13,0:13:39.13:0,39,796	0/0:20,0:20:60.21:0,60,1245	0/0:25,0:25:75.23:0,75,1532	0/0:17,0:17:48.16:0,48,974	0/0:15,0:15:45.14:0,45,862	0/0:24,0:24:72.23:0,72,1415	1/1:0,18:20:48.15:1390,48,0	0/0:43,0:43:99:0,126,2531	1/1:3,17:21:51.18:1476,51,0	0/0:26,0:26:78.27:0,78,1577	0/0:17,0:17:51.17:0,51,1015	0/0:33,0:33:99:0,99,1915	0/0:27,0:27:81.26:0,81,1599	0/0:18,0:18:48.16:0,48,963	0/0:20,0:20:57.20:0,57,1167	0/0:12,0:12:32.84:0,33,655	0/1:5,0:22:93.80:809,0,94	0/0:17,0:17:51.16:0,51,1002	1/1:0,0:10:24.08:482,24,0
chr10	98992580	.	T	TC	542.88	PASS	AB=0.810;AC=4;AF=0.071;AN=56;BaseQRankSum=6.749;DP=520;FS=8.578;HRun=0;HaplotypeScore=70.3172;InbreedingCoeff=0.4363;MQ=62.97;MQ0=9;MQRankSum=-1.631;QD=8.35;ReadPosRankSum=2.357;VQSLOD=3.0668;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,14:34:11.76:435,12,0	0/0:7,0:7:20.90:0,21,206	0/0:33,0:11:13.64:0,14,184	0/0:24,0:10:20.06:0,20,137	0/0:12,0:12:28.57:0,29,262	0/0:15,0:15:41.06:0,41,388	0/0:18,0:17:36.75:0,37,350	0/0:16,0:14:28.86:0,29,186	0/0:12,0:12:35.78:0,36,323	0/0:12,0:11:32.97:0,33,334	0/0:14,0:14:36.73:0,37,360	0/0:23,0:23:56.90:0,57,560	0/0:21,0:21:51.33:0,51,463	0/0:12,0:12:32.99:0,33,330	0/0:23,0:23:62.88:0,63,615	0/1:12,1:13:12.94:13,0,70	0/0:34,0:34:89.92:0,90,912	0/1:10,8:16:20.90:204,0,21	0/0:17,0:17:31.96:0,32,286	0/0:14,0:14:40.32:0,40,305	0/0:13,0:13:35.08:0,35,284	0/0:18,0:18:43.16:0,43,403	0/0:17,0:16:43.16:0,43,448	0/0:27,0:25:68.43:0,68,645	0/0:13,0:13:35.95:0,36,379	0/0:21,0:19:54.12:0,54,358	0/0:29,0:29:76.49:0,76,676	0/0:10,0:9:20.72:0,21,139
chr10	98992582	.	TCC	T	877.98	PASS	AB=0.667;AC=9;AF=0.167;AN=54;BaseQRankSum=9.531;DP=490;FS=6.225;HRun=6;HaplotypeScore=70.9435;InbreedingCoeff=0.8265;MQ=63.53;MQ0=10;MQRankSum=-3.435;QD=11.86;ReadPosRankSum=3.936;VQSLOD=-0.2859;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,16:29:57.98:575,58,0	0/0:7,0:7:18.04:0,18,234	0/0:31,0:9:12.51:0,13,165	0/0:25,0:10:9:0,9,99	0/0:13,0:13:32.62:0,33,385	0/0:16,0:16:42.10:0,42,565	0/0:17,0:16:42.11:0,42,575	./.	0/0:12,0:12:29.11:0,29,383	0/0:9,0:9:18.06:0,18,271	0/0:18,0:18:51.12:0,51,677	0/0:23,0:23:54.14:0,54,760	0/0:19,0:19:42.12:0,42,609	0/0:15,0:15:36.10:0,36,523	0/0:24,0:24:54.79:0,55,741	1/1:10,2:12:13.93:101,14,0	0/0:32,0:32:78.17:0,78,1138	1/1:6,12:16:21.98:266,22,0	0/0:18,0:18:46.15:0,46,607	0/0:15,0:15:24.08:0,24,333	0/0:14,0:14:29.99:0,30,403	0/0:18,0:18:22.91:0,23,541	0/0:18,0:17:38.47:0,38,524	0/0:25,0:23:51.84:0,52,631	0/0:15,0:15:39.11:0,39,541	0/1:3,0:5:22.23:22,0,38	0/0:30,0:30:69.17:0,69,938	1/1:1,0:8:11.63:72,12,0
chr10	98992583	.	C	CT	663.63	PASS	AB=0.947;AC=5;AF=0.093;AN=54;BaseQRankSum=8.516;DP=483;FS=9.361;HRun=16;HaplotypeScore=67.1776;InbreedingCoeff=0.6356;MQ=62.58;MQ0=10;MQRankSum=-2.086;QD=11.06;ReadPosRankSum=3.821;VQSLOD=2.6241;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,2:30:40.37:471,40,0	0/0:7,0:7:20.95:0,21,240	0/0:30,0:9:16.48:0,16,139	0/0:24,0:9:13.86:0,14,129	0/0:13,0:13:10.13:0,10,318	0/0:16,0:16:42.58:0,43,520	0/0:18,0:17:42.10:0,42,507	./.	0/0:11,0:11:33.04:0,33,379	0/0:8,0:8:23.95:0,24,267	0/0:18,0:18:47.55:0,48,500	0/0:22,0:22:54.06:0,54,639	0/0:19,0:19:47.73:0,48,523	0/0:14,0:14:39.06:0,39,453	0/0:24,0:24:63.14:0,63,704	1/1:3,8:11:8.74:180,9,0	0/0:32,0:32:84.09:0,84,1010	0/1:17,1:16:41.90:135,0,42	0/0:19,0:19:48.31:0,48,527	0/0:14,0:14:29.51:0,30,305	0/0:13,0:13:35.95:0,36,417	0/0:18,0:18:38.83:0,39,469	0/0:17,0:16:41.89:0,42,455	0/0:25,0:23:62.57:0,63,658	0/0:16,0:16:42.08:0,42,484	0/0:5,0:4:0.55:0,1,48	0/0:30,0:30:77.86:0,78,843	0/0:9,0:8:10.90:0,11,44
chr10	98994436	.	CA	C	2600.48	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.693;DP=986;FS=11.358;HRun=1;HaplotypeScore=220.5684;InbreedingCoeff=0.9942;MQ=50.92;MQ0=23;MQRankSum=3.939;QD=24.08;ReadPosRankSum=3.001;VQSLOD=1.7893;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,31:35:19.49:828,19,0	0/0:9,0:9:24.08:0,24,383	0/0:42,0:8:21.07:0,21,335	0/0:27,0:8:21.07:0,21,336	0/0:41,0:41:66.21:0,66,1048	0/0:39,0:39:81.26:0,81,1295	0/0:20,0:20:57.66:0,58,886	0/0:56,0:54:99:0,160,2503	0/0:54,0:54:99:0,124,1893	0/0:66,0:65:99:0,190,2930	0/0:27,0:27:39.12:0,39,626	0/0:48,0:48:99:0,115,1775	0/0:29,0:29:75.23:0,75,1175	0/0:28,0:28:75.25:0,75,1196	0/0:52,0:52:99:0,114,1796	1/1:1,52:53:54.21:1293,54,0	0/0:30,0:30:62.09:0,62,927	1/1:3,16:18:39.35:621,39,0	0/0:20,0:16:48.14:0,48,721	0/0:37,0:37:99:0,111,1722	0/0:36,0:36:96.31:0,96,1504	0/0:28,0:28:57.13:0,57,851	0/0:18,0:18:39.13:0,39,611	0/0:40,0:40:78.02:0,78,1246	0/0:27,0:27:78.27:0,78,1247	0/0:51,0:51:99:0,150,2341	0/0:35,0:35:93.31:0,93,1479	0/0:18,0:18:51.15:0,51,789
chr10	98994645	.	CACACATAT	C	484.43	PASS	AB=0.708;AC=5;AF=0.089;AN=56;BaseQRankSum=4.815;DP=860;FS=12.407;HRun=0;HaplotypeScore=229.9598;InbreedingCoeff=0.7026;MQ=53.84;MQ0=19;MQRankSum=-2.814;QD=8.97;ReadPosRankSum=-1.498;VQSLOD=1.1864;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,7:17:18.28:18,0,28	0/0:17,0:17:48.16:0,48,2009	0/0:47,0:13:23.57:0,24,934	0/0:33,0:10:21.07:0,21,707	0/0:29,0:29:63.07:0,63,2535	0/0:22,0:22:51.09:0,51,2121	0/0:19,0:18:42.14:0,42,1518	0/0:47,0:43:84.26:0,84,2947	0/0:29,0:29:72.21:0,72,2715	0/0:56,0:55:99:0,138,5099	0/0:29,0:29:66.23:0,66,2714	0/0:32,0:32:78.17:0,78,3045	0/0:36,0:36:90.29:0,90,3639	0/0:25,0:25:51.14:0,51,1808	0/0:37,0:37:87.22:0,87,3312	1/1:7,16:23:4.11:112,4,0	0/0:31,0:31:53.19:0,53,1916	1/1:9,5:13:21.07:472,21,0	0/0:28,0:27:63.21:0,63,2253	0/0:32,0:32:72.25:0,72,2768	0/0:34,0:34:84.29:0,84,3458	0/0:33,0:33:81.26:0,81,3159	0/0:25,0:25:57.10:0,57,2073	0/0:28,0:28:48.14:0,48,1867	0/0:32,0:32:81.16:0,81,3156	0/0:44,0:44:99:0,120,4488	0/0:26,0:26:57.17:0,57,2235	0/0:34,0:33:87.26:0,87,3489
chr10	98994785	.	TG	T	1813.42	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=7.719;DP=585;FS=2.177;HRun=1;HaplotypeScore=61.6352;InbreedingCoeff=0.8608;MQ=58.19;MQ0=15;MQRankSum=-4.140;QD=16.64;ReadPosRankSum=-7.451;VQSLOD=1.1231;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:26.39:147,26,0	0/0:4,0:4:12.01:0,12,127	0/0:21,0:9:20.27:0,20,289	0/0:22,1:11:12.56:0,13,226	0/0:33,0:32:96.24:0,96,1174	0/0:14,0:14:39.11:0,39,491	0/0:23,0:23:54:0,54,645	1/1:13,18:28:67.21:788,67,0	0/0:15,0:15:45.13:0,45,566	0/0:30,0:29:87.22:0,87,1045	0/0:19,0:19:57.09:0,57,646	0/0:19,0:19:57.16:0,57,707	0/0:17,0:17:45.82:0,46,553	0/0:20,0:20:60.11:0,60,724	0/0:16,0:16:45.04:0,45,518	0/1:11,0:9:25.10:53,0,25	0/0:35,0:35:99:0,102,1219	1/1:11,0:9:9.22:57,9,0	0/0:28,0:27:81.24:0,81,1021	0/0:22,0:22:63.05:0,63,729	0/0:18,0:18:53.98:0,54,622	0/0:19,0:18:54.16:0,54,683	0/0:22,0:22:65.98:0,66,754	0/0:32,0:31:93.22:0,93,1151	0/0:19,0:19:57.15:0,57,705	1/1:18,7:25:40.06:629,40,0	0/0:27,0:26:81.17:0,81,993	1/1:2,11:13:24.06:315,24,0
chr10	98995487	.	GAACA	G	2313.52	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.091;DP=656;FS=0.563;HRun=0;HaplotypeScore=108.0297;InbreedingCoeff=0.9984;MQ=80.10;MQ0=0;MQRankSum=-6.432;QD=34.02;ReadPosRankSum=2.340;VQSLOD=3.7495;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,35:38:72.25:1282,72,0	0/0:13,0:13:39.13:0,39,956	0/0:24,0:23:57.15:0,57,1337	0/0:41,0:41:98.99:0,99,2067	0/0:19,0:19:48.15:0,48,1186	0/0:23,0:23:63.14:0,63,1392	0/0:20,0:20:57.17:0,57,1364	0/0:38,0:38:90.31:0,90,2284	0/0:29,0:29:63.22:0,63,1604	0/0:18,0:18:51.16:0,51,1235	0/0:18,0:18:54.18:0,54,1313	0/0:27,0:27:75.21:0,75,1685	0/0:31,0:31:78.25:0,78,1890	0/0:25,0:25:72.25:0,72,1858	0/0:26,0:26:72.25:0,72,1830	1/1:2,16:18:42.42:748,42,0	0/0:19,0:19:51.14:0,51,1210	1/1:3,9:12:24.08:426,24,0	0/0:21,0:21:48.15:0,48,1140	0/0:14,0:14:36.12:0,36,929	0/0:36,0:36:99:0,99,2433	0/0:13,0:13:33.10:0,33,794	0/0:26,0:26:69.22:0,69,1655	0/0:29,0:28:76.81:0,77,1939	0/0:16,0:16:48.16:0,48,1229	0/0:20,0:20:54.17:0,54,1308	0/0:31,0:31:93.32:0,93,2374	0/0:11,0:11:24.08:0,24,617
chr10	98996718	.	GTGTT	G	2418.66	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.730;DP=480;FS=1.311;HRun=0;HaplotypeScore=78.1167;InbreedingCoeff=0.9748;MQ=71.40;MQ0=0;MQRankSum=-3.126;QD=40.31;ReadPosRankSum=2.333;VQSLOD=4.0366;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:66.23:1210,66,0	0/0:14,0:14:42.14:0,42,1056	0/0:18,0:19:49.40:0,49,1144	0/0:19,0:17:41.61:0,42,948	0/0:31,0:31:87.28:0,87,2138	0/0:23,0:23:59.86:0,60,1489	0/0:11,0:11:33.11:0,33,822	0/0:31,0:31:78.27:0,78,1943	0/0:10,0:10:27.09:0,27,696	0/0:25,0:25:69.24:0,69,1784	0/0:17,0:16:51.17:0,51,1261	0/0:8,0:8:24.08:0,24,619	0/0:14,0:14:40.02:0,40,1016	0/0:10,0:10:30.10:0,30,781	0/0:13,0:13:39.13:0,39,979	1/1:1,10:11:30.10:533,30,0	0/0:30,0:30:84.29:0,84,2159	1/1:1,18:19:45.15:819,45,0	0/0:19,0:19:51.18:0,51,1318	0/0:20,0:20:60.19:0,60,1432	0/0:17,0:17:45.15:0,45,1131	0/0:7,0:7:18.06:0,18,472	0/0:9,0:9:27.09:0,27,680	0/0:3,0:3:9.03:0,9,209	0/0:17,0:17:48.16:0,48,1222	0/0:24,0:24:69.24:0,69,1784	0/0:18,0:17:54.19:0,54,1401	0/0:11,0:11:33.11:0,33,857
chr10	98998013	.	TCAAAA	T	2505.67	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.832;DP=781;FS=6.514;HRun=0;HaplotypeScore=149.6988;InbreedingCoeff=0.9886;MQ=72.52;MQ0=1;MQRankSum=-4.366;QD=39.15;ReadPosRankSum=3.748;VQSLOD=2.9321;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,18:28:45.15:877,45,0	0/0:5,0:5:12.04:0,12,354	0/0:25,0:25:54.18:0,54,1432	0/0:33,0:31:75.26:0,75,2055	0/0:32,0:32:78.27:0,78,2259	0/0:27,0:27:72.25:0,72,2057	0/0:17,0:17:48.16:0,48,1226	0/0:41,0:41:99:0,114,3206	0/0:28,0:28:72.25:0,72,2123	0/0:35,0:35:69.24:0,69,1923	0/0:20,0:20:54.17:0,54,1442	0/0:19,0:19:51.17:0,51,1427	0/0:27,0:27:75.26:0,75,2212	0/0:31,0:31:90.30:0,90,2561	0/0:44,0:44:99:0,114,3238	1/1:1,22:23:66.19:1249,66,0	0/0:29,0:29:72.25:0,72,2079	1/1:4,9:13:27.09:522,27,0	0/0:20,0:20:33.11:0,33,972	0/0:42,0:42:99:0,105,3034	0/0:36,0:36:99:0,99,2877	0/0:29,0:29:63.20:0,63,1770	0/0:28,0:28:57.20:0,57,1682	0/0:39,0:39:99:0,99,2684	0/0:25,0:25:72.25:0,72,2098	0/0:36,0:36:90.31:0,90,2650	0/0:28,0:28:72.25:0,72,2123	0/0:21,0:21:60.21:0,60,1737
chr10	98998220	.	A	ATTG	11158.28	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-13.353;DP=719;FS=3.247;HRun=0;HaplotypeScore=94.9765;InbreedingCoeff=0.9967;MQ=87.76;MQ0=1;MQRankSum=-4.881;QD=58.42;ReadPosRankSum=0.434;VQSLOD=6.6234;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,71:76:99:4457,199,0	0/0:12,0:12:33.10:0,33,537	0/0:27,0:28:81.24:0,81,1330	0/0:27,0:27:54.42:0,54,1001	0/0:31,0:31:90.27:0,90,1479	0/0:19,0:19:51.16:0,51,843	0/0:22,0:22:57.18:0,57,931	1/1:2,34:38:99:2354,114,0	0/0:23,0:23:66.23:0,66,1125	0/0:32,0:32:96.33:0,96,1627	0/0:15,0:15:42.13:0,42,690	0/0:26,0:26:72.25:0,72,1227	0/0:17,0:17:45.13:0,45,714	0/0:34,0:34:99:0,99,1639	0/0:24,0:24:72.23:0,72,1192	1/1:0,16:18:39.13:898,39,0	0/0:22,0:22:60.16:0,60,958	1/1:0,10:10:15.05:345,15,0	0/0:19,0:19:57.18:0,57,924	0/0:27,0:27:72.25:0,72,1226	0/0:32,0:32:96.31:0,96,1604	0/0:27,0:27:72.22:0,72,1174	0/0:25,0:25:69.24:0,69,1175	0/0:27,0:27:78.25:0,78,1301	0/0:15,0:15:45.15:0,45,767	1/1:2,27:29:81.28:1862,81,0	0/0:23,0:23:69.24:0,69,1170	1/1:1,19:20:54.19:1242,54,0
chr10	98998608	.	G	GA	2635.03	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-13.140;DP=595;FS=6.190;HRun=9;HaplotypeScore=56.3944;InbreedingCoeff=0.9315;MQ=78.10;MQ0=0;MQRankSum=-1.348;QD=25.83;ReadPosRankSum=-2.759;VQSLOD=3.3517;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:25:59.96:0,60,521	0/0:12,0:12:29.98:0,30,260	0/0:24,0:23:53.94:0,54,460	0/0:7,0:7:0.24:0,0,67	0/0:31,0:31:77.97:0,78,677	0/0:23,0:23:50.98:0,51,443	0/0:14,0:14:38.97:0,39,333	1/1:5,33:38:96.24:1053,96,0	0/0:16,0:16:47.99:0,48,417	0/0:28,0:28:74.97:0,75,650	0/0:24,0:24:65.95:0,66,566	0/0:27,0:27:74.98:0,75,651	0/0:22,0:22:56.97:0,57,495	0/0:16,0:16:38.99:0,39,339	0/0:20,0:20:56.99:0,57,495	1/1:2,14:16:36.10:398,36,0	0/0:18,0:18:47.98:0,48,417	0/0:17,0:17:44.96:0,45,386	0/0:16,0:16:41.99:0,42,365	0/0:23,0:23:59.97:0,60,521	0/0:12,0:12:29.98:0,30,260	0/0:20,1:21:26.81:0,27,461	0/0:18,0:18:25.33:0,25,345	0/0:22,0:22:53.50:0,53,468	0/0:22,0:22:56.97:0,57,495	1/1:3,26:29:72.16:779,72,0	0/0:35,0:35:92.98:0,93,807	1/1:0,19:19:51.14:564,51,0
chr10	98999372	.	T	TA	1791.65	PASS	AB=0.985;AC=8;AF=0.143;AN=56;BaseQRankSum=6.814;DP=619;FS=1.614;HRun=9;HaplotypeScore=87.4064;InbreedingCoeff=0.7427;MQ=66.04;MQ0=1;MQRankSum=-7.957;QD=14.93;ReadPosRankSum=-2.372;VQSLOD=3.5025;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,24:33:69.12:757,69,0	0/0:7,0:7:17.99:0,18,156	0/1:32,1:22:4.02:4,0,234	0/1:14,0:9:16.04:16,0,48	0/0:27,0:27:80.98:0,81,703	0/0:23,0:23:59.98:0,60,520	0/0:24,0:24:65.98:0,66,572	0/0:39,0:40:79.11:0,79,665	0/0:26,0:26:65.97:0,66,572	0/0:21,0:21:26.90:0,27,324	0/0:33,1:34:56.78:0,57,722	0/0:17,0:17:47.99:0,48,417	0/0:12,0:12:32.99:0,33,286	0/0:16,0:16:44.97:0,45,387	0/0:17,0:17:47.99:0,48,417	1/1:6,15:21:57.14:616,57,0	0/0:21,0:21:53.98:0,54,468	1/1:4,15:19:51.10:549,51,0	0/0:27,0:27:56.18:0,56,476	0/0:20,0:20:50.89:0,51,430	0/0:17,0:17:33.46:0,33,288	0/0:17,0:18:49.99:0,50,417	0/0:18,0:19:46.91:0,47,383	0/0:20,0:19:50.97:0,51,443	0/0:23,0:23:56.96:0,57,495	0/0:28,0:28:62.93:0,63,546	0/0:21,0:21:56.98:0,57,495	0/0:21,0:20:44.82:0,45,390
chr10	98999396	.	A	AC	3228.29	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=0.651;DP=619;FS=3.219;HRun=1;HaplotypeScore=80.6927;InbreedingCoeff=0.9646;MQ=63.74;MQ0=0;MQRankSum=-3.809;QD=21.38;ReadPosRankSum=-0.515;VQSLOD=3.6150;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:28:18.64:276,19,0	0/0:8,0:8:24.05:0,24,271	0/0:36,0:24:52.64:0,53,504	0/0:10,0:4:4.44:0,4,61	0/0:32,0:32:96.20:0,96,1116	0/0:28,0:28:78.12:0,78,904	0/0:23,0:23:69.16:0,69,807	1/1:2,30:32:89.32:1047,89,0	0/0:25,0:25:75.13:0,75,846	0/0:22,0:22:58.92:0,59,719	0/0:32,0:32:96.20:0,96,1142	0/0:21,0:21:63.01:0,63,694	0/0:12,0:12:36.08:0,36,416	0/0:14,0:14:42.04:0,42,509	0/0:15,0:15:42.07:0,42,464	1/1:2,1:20:50.58:376,51,0	0/0:21,0:21:63.03:0,63,706	1/1:5,0:19:35.21:255,35,0	0/0:23,0:23:55.20:0,55,659	0/0:26,0:26:78.17:0,78,911	0/0:8,0:8:24.08:0,24,310	0/0:23,0:23:69.09:0,69,783	0/0:20,0:20:60:0,60,643	0/0:19,0:18:57.12:0,57,674	0/0:23,0:23:66.05:0,66,735	1/1:2,26:28:12.84:870,13,0	0/0:26,0:26:72.14:0,72,822	1/1:3,20:22:27.76:589,28,0
chr10	98999678	.	CTG	C	2287.69	PASS	AB=0.691;AC=9;AF=0.161;AN=56;BaseQRankSum=15.342;DP=785;FS=42.961;HRun=0;HaplotypeScore=144.0026;InbreedingCoeff=0.6027;MQ=59.24;MQ0=10;MQRankSum=-12.136;QD=15.89;ReadPosRankSum=-2.837;VQSLOD=1.4231;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,12:29:39.47:187,0,39	0/0:10,0:10:30.10:0,30,577	0/0:38,0:22:54.86:0,55,882	0/0:54,0:27:36.38:0,36,541	0/0:23,0:23:66.18:0,66,1149	0/0:33,0:32:96.31:0,96,1802	0/0:21,0:21:63.15:0,63,1110	1/1:11,22:31:83.77:779,84,0	0/0:18,0:18:54.10:0,54,903	0/0:32,0:32:90.27:0,90,1605	0/0:28,0:28:81.22:0,81,1411	0/0:32,0:32:90.26:0,90,1599	0/0:24,0:24:72.22:0,72,1318	0/0:26,0:26:78.20:0,78,1355	0/0:38,0:38:99:0,109,1921	1/1:6,12:18:38.69:326,39,0	0/0:32,0:32:81.28:0,81,1555	0/1:13,5:18:99:220,0,147	0/0:32,0:30:89.77:0,90,1528	0/0:21,0:21:60.19:0,60,1100	0/0:45,0:45:99:0,109,1982	0/0:30,0:30:87.25:0,87,1568	0/0:17,0:17:41.86:0,42,729	0/0:35,0:35:78.25:0,78,1443	0/0:18,0:18:54.16:0,54,1004	0/1:8,22:30:87.71:624,0,88	0/0:34,0:34:99:0,102,1846	1/1:7,8:14:35.50:311,35,0
chr10	98999815	.	CTG	C	2279.94	PASS	AB=0.556;AC=5;AF=0.089;AN=56;BaseQRankSum=11.854;DP=897;FS=18.310;HRun=0;HaplotypeScore=135.2761;InbreedingCoeff=0.7434;MQ=62.00;MQ0=7;MQRankSum=-5.524;QD=27.14;ReadPosRankSum=-1.577;VQSLOD=3.2248;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:32.73:0,33,958	0/0:10,0:10:30.10:0,30,534	0/0:34,0:18:41.15:0,41,585	0/0:35,0:20:5.72:0,6,450	0/0:35,0:35:99:0,102,1781	0/0:36,0:36:99:0,105,1750	0/0:32,0:32:84.24:0,84,1443	1/1:5,28:29:66.10:839,66,0	0/0:24,0:24:66.20:0,66,1170	0/0:36,0:36:99:0,108,1925	0/0:25,0:25:75.18:0,75,1220	0/0:44,0:44:99:0,120,2138	0/0:35,0:35:99:0,102,1820	0/0:26,0:26:75.23:0,75,1306	0/0:30,0:30:84.26:0,84,1453	0/0:23,0:23:57.17:0,57,986	0/0:41,1:42:80.01:0,80,1969	0/0:29,0:29:52.02:0,52,1074	0/0:27,0:25:72.19:0,72,1222	0/0:47,0:47:99:0,135,2408	0/0:36,0:36:99:0,105,1812	0/0:24,0:24:66.16:0,66,1085	0/0:32,0:32:93.25:0,93,1561	0/0:45,0:45:99:0,110,1962	0/0:19,0:19:54.17:0,54,945	0/1:6,24:30:83.68:924,0,84	0/0:40,0:39:99:0,117,1932	1/1:2,19:21:48.13:646,48,0
chr10	98999853	.	GTATCTC	G	2193.94	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=4.939;DP=809;FS=9.277;HRun=0;HaplotypeScore=183.0392;InbreedingCoeff=0.8402;MQ=60.18;MQ0=6;MQRankSum=-3.134;QD=14.43;ReadPosRankSum=-1.912;VQSLOD=2.2236;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,35:43:2.66:17,3,0	0/0:10,0:10:24.08:0,24,753	0/0:37,0:15:32.13:0,32,559	0/0:45,0:30:38.72:0,39,859	0/0:28,0:28:75.17:0,75,1929	0/0:23,0:23:57.11:0,57,1544	0/0:20,0:20:35.99:0,36,843	1/1:41,0:37:68.21:794,68,0	0/0:19,0:19:54.13:0,54,1487	0/0:28,0:28:75.20:0,75,2000	0/0:24,0:24:72.09:0,72,1777	0/0:50,0:50:99:0,132,3372	0/0:32,0:32:90.24:0,90,2370	0/0:22,0:22:57.04:0,57,1418	0/0:31,0:31:81.23:0,81,2409	1/1:13,5:18:30.03:460,30,0	0/0:29,0:29:84.08:0,84,2053	1/1:18,3:21:38.68:719,39,0	0/0:25,0:25:69.11:0,69,1470	0/0:40,0:40:99:0,105,2798	0/0:31,0:31:75.06:0,75,1970	0/0:22,0:22:66.19:0,66,1797	0/0:30,0:30:75.16:0,75,1926	0/0:43,0:42:99:0,102,2747	0/0:24,0:24:69.15:0,69,1712	0/1:18,0:18:99:272,0,156	0/0:41,0:40:99:0,114,2915	1/1:11,0:11:16.68:102,17,0
chr10	98999873	.	GTC	G	730.03	PASS	AB=0.798;AC=7;AF=0.125;AN=56;BaseQRankSum=10.337;DP=738;FS=8.069;HRun=0;HaplotypeScore=123.1172;InbreedingCoeff=0.4498;MQ=60.20;MQ0=11;MQRankSum=-9.169;QD=9.13;ReadPosRankSum=-0.446;VQSLOD=2.3325;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:2.29:0,2,17	0/0:10,0:10:30.10:0,30,535	0/0:26,0:11:8.28:0,8,261	0/0:32,0:20:14.24:0,14,400	0/0:30,0:30:72.25:0,72,1253	0/0:28,0:28:75.26:0,75,1332	0/0:26,0:26:62.86:0,63,1056	1/1:26,0:21:47.66:453,48,0	0/0:23,0:23:60.21:0,60,1058	0/0:30,0:28:84.24:0,84,1426	0/0:24,0:24:57.20:0,57,1017	0/0:41,0:41:99:0,108,1886	0/0:26,0:26:78.22:0,78,1278	0/0:17,0:17:48.12:0,48,816	0/0:28,0:28:81.26:0,81,1426	0/1:13,2:15:27.45:27,0,119	0/0:30,0:30:83.50:0,83,1435	0/1:11,5:16:43.82:44,0,81	0/0:21,0:21:60.15:0,60,920	0/0:37,0:37:99:0,108,1797	0/0:35,0:33:84.29:0,84,1508	0/0:31,0:31:90.26:0,90,1507	0/0:24,0:24:72.23:0,72,1248	0/0:42,0:41:91.15:0,91,1666	0/0:21,0:21:54.18:0,54,960	0/1:10,5:15:74.48:224,0,74	0/0:34,0:33:99:0,99,1717	1/1:8,0:8:13.09:121,13,0
chr10	98999875	.	C	CTG	1513.25	PASS	AB=0.930;AC=7;AF=0.125;AN=56;BaseQRankSum=9.003;DP=731;FS=11.574;HRun=0;HaplotypeScore=120.8640;InbreedingCoeff=0.4823;MQ=59.67;MQ0=11;MQRankSum=-8.267;QD=18.92;ReadPosRankSum=-1.439;VQSLOD=2.8646;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:2.65:0,3,18	0/0:11,0:11:30.10:0,30,458	0/0:21,0:8:8.28:0,8,234	0/0:29,0:19:13.58:0,14,355	0/0:31,0:31:72.09:0,72,1091	0/0:29,0:28:75.25:0,75,1144	0/0:25,0:25:62.86:0,63,918	1/1:7,18:20:54.17:876,54,0	0/0:23,0:23:63.20:0,63,930	0/0:32,0:30:84.28:0,84,1246	0/0:23,0:23:57.19:0,57,869	0/0:39,0:39:99:0,108,1627	0/0:28,0:28:81.21:0,81,1145	0/0:17,0:17:48.12:0,48,688	0/0:29,0:29:81.26:0,81,1217	0/1:16,0:16:6.02:6,0,188	0/0:32,0:32:86.77:0,87,1268	0/1:16,0:16:6.72:7,0,323	0/0:20,0:20:60.15:0,60,827	0/0:36,0:36:99:0,108,1574	0/0:36,0:34:84.04:0,84,1279	0/0:32,0:32:93.25:0,93,1327	0/0:24,0:24:72.23:0,72,1075	0/0:40,0:39:96.62:0,97,1422	0/0:19,0:19:54.18:0,54,823	0/1:11,4:15:66.03:420,0,66	0/0:33,0:32:99:0,99,1465	1/1:1,7:8:11.64:336,12,0
chr10	98999889	.	CTCTGTCTG	C	702.86	PASS	AB=1.000;AC=11;AF=0.212;AN=52;BaseQRankSum=8.269;DP=708;FS=2.710;HRun=0;HaplotypeScore=193.1946;InbreedingCoeff=0.7807;MQ=57.64;MQ0=16;MQRankSum=-7.712;QD=5.81;ReadPosRankSum=-2.593;VQSLOD=2.5269;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,5:40:5.09:149,5,0	0/0:11,0:11:27.09:0,27,967	./.	./.	0/0:28,0:29:42.14:0,42,1444	0/0:32,0:31:57.42:0,57,2085	0/0:24,0:24:47.59:0,48,1758	1/1:22,0:12:11.40:56,11,0	0/0:21,0:21:45.14:0,45,1571	0/0:31,0:29:57.19:0,57,1834	0/0:24,0:24:30.10:0,30,862	0/0:35,0:35:63.20:0,63,1846	0/0:24,0:24:39.12:0,39,1071	0/0:18,0:18:33.11:0,33,982	0/0:31,0:31:54.17:0,54,1869	1/1:7,11:17:12.04:303,12,0	0/0:32,0:32:32.14:0,32,1696	1/1:16,1:16:9.03:226,9,0	0/0:17,0:17:21.06:0,21,510	0/0:31,0:31:54.19:0,54,1748	0/0:41,0:39:75.03:0,75,2431	0/0:36,0:36:81.26:0,81,2655	0/0:27,0:28:57.18:0,57,1631	0/0:43,0:43:72.06:0,72,2091	0/0:19,0:19:39.12:0,39,1153	0/1:15,0:14:64.76:112,0,65	0/0:30,0:29:54.15:0,54,1688	1/1:8,0:8:3.26:9,3,0
chr10	98999895	.	CTG	C	434.91	PASS	AB=0.905;AC=9;AF=0.161;AN=56;BaseQRankSum=10.114;DP=712;FS=0.621;HRun=0;HaplotypeScore=117.3413;InbreedingCoeff=0.4924;MQ=55.56;MQ0=18;MQRankSum=-6.260;QD=3.54;ReadPosRankSum=-2.130;VQSLOD=2.4484;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:43,0:42:2.10:116,2,0	0/0:12,0:12:33.58:0,34,608	0/0:6,0:2:6.02:0,6,86	0/0:11,1:5:5.76:0,6,60	0/0:26,0:26:63.18:0,63,1058	0/0:31,0:31:41.44:0,41,1356	0/0:23,0:23:59.65:0,60,1165	1/1:15,4:9:17.75:166,18,0	0/0:21,0:21:54.18:0,54,980	0/0:32,0:30:87.26:0,87,1477	0/0:22,0:22:51.16:0,51,848	0/0:34,0:34:96.31:0,96,1636	0/0:25,0:25:72.23:0,72,1184	0/0:18,0:18:54.16:0,54,899	0/0:29,0:29:87.28:0,87,1467	0/1:17,0:16:28.03:28,0,79	0/0:34,0:34:67.46:0,67,1325	0/1:18,0:17:17.07:17,0,307	0/0:24,0:24:59.09:0,59,782	0/0:33,0:33:96.27:0,96,1611	0/0:41,0:39:94.76:0,95,1677	0/0:38,0:38:99:0,107,1882	0/0:30,0:30:84.48:0,84,1491	0/0:46,0:45:98.12:0,98,1851	0/0:19,0:19:51.17:0,51,891	0/1:9,6:14:71.88:152,0,72	0/0:32,0:31:96.29:0,96,1629	1/1:10,1:11:14.68:102,15,0
chr10	98999897	.	G	GTCTGTC	586.60	PASS	AB=0.898;AC=9;AF=0.161;AN=56;BaseQRankSum=9.388;DP=706;FS=0.646;HRun=0;HaplotypeScore=168.9979;InbreedingCoeff=0.4725;MQ=54.62;MQ0=18;MQRankSum=-6.221;QD=4.69;ReadPosRankSum=-3.711;VQSLOD=1.8444;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:41,2:42:2.83:205,3,0	0/0:12,0:12:29.92:0,30,650	0/0:7,0:3:2.99:0,3,23	0/0:11,0:5:2.99:0,3,24	0/0:25,0:25:57.16:0,57,1072	0/0:32,0:31:75.24:0,75,1497	0/0:23,0:23:59.61:0,60,1293	1/1:18,0:8:19.95:99,20,0	0/0:23,0:23:60.15:0,60,1163	0/0:31,0:29:78.22:0,78,1474	0/0:20,0:20:42.14:0,42,793	0/0:33,0:33:87.28:0,87,1621	0/0:23,0:23:66.21:0,66,1144	0/0:18,0:18:48.12:0,48,845	0/0:28,0:28:75.24:0,75,1476	0/1:16,0:16:68.07:126,0,68	0/0:32,0:32:51.54:0,52,1336	0/1:12,6:17:15.46:15,0,190	0/0:25,0:24:63.02:0,63,829	0/0:32,0:32:84.23:0,84,1546	0/0:41,0:39:94.16:0,94,1816	0/0:38,0:38:99:0,102,1969	0/0:31,0:31:84.27:0,84,1524	0/0:45,0:44:99:0,104,1822	0/0:20,0:20:48.14:0,48,914	0/1:18,0:17:59.88:199,0,60	0/0:31,0:30:87.28:0,87,1568	1/1:11,0:11:11.04:88,11,0
chr10	98999903	.	CTG	C	710.61	PASS	AB=0.880;AC=7;AF=0.125;AN=56;BaseQRankSum=9.308;DP=706;FS=0.587;HRun=0;HaplotypeScore=114.3128;InbreedingCoeff=0.5096;MQ=55.63;MQ0=17;MQRankSum=-6.611;QD=8.67;ReadPosRankSum=-1.151;VQSLOD=3.3292;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:19.43:0,19,250	0/0:13,0:13:36.59:0,37,651	0/0:4,0:3:9.01:0,9,105	0/0:12,0:8:8.70:0,9,140	0/0:26,0:26:63.18:0,63,1057	0/0:32,0:31:87.27:0,87,1510	0/0:26,0:26:69.20:0,69,1218	1/1:13,5:8:23.86:258,24,0	0/0:24,0:24:66.20:0,66,1134	0/0:31,0:30:87.29:0,87,1496	0/0:20,0:20:45.15:0,45,808	0/0:33,0:33:99:0,99,1663	0/0:23,0:23:66.21:0,66,1101	0/0:19,0:19:51.14:0,51,831	0/0:26,0:26:75.24:0,75,1323	0/1:18,0:17:9.78:10,0,142	0/0:33,0:33:55.44:0,55,1313	0/1:18,0:17:6.93:7,0,297	0/0:26,0:24:66.92:0,67,1017	0/0:29,0:29:84.29:0,84,1483	0/0:40,0:38:96.10:0,96,1653	0/0:38,0:39:99:0,108,1874	0/0:29,0:29:81.47:0,81,1433	0/0:42,0:41:93.94:0,94,1688	0/0:20,0:20:54.16:0,54,917	0/1:7,9:15:46.74:367,0,47	0/0:32,0:31:93.30:0,93,1580	1/1:11,1:12:20.56:206,21,0
chr10	99000321	.	A	AGGG	1555.80	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.501;DP=643;FS=7.444;HRun=0;HaplotypeScore=88.2310;InbreedingCoeff=0.9784;MQ=82.59;MQ0=0;MQRankSum=-2.448;QD=47.15;ReadPosRankSum=-2.123;VQSLOD=5.0897;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,2215	0/0:9,0:9:27.09:0,27,494	0/0:17,0:17:45.09:0,45,770	0/0:29,0:29:78.06:0,78,1310	0/0:13,0:13:39.12:0,39,687	0/0:16,0:16:48.16:0,48,895	0/0:18,0:18:51.17:0,51,948	1/1:2,11:15:36.48:649,36,0	0/0:23,0:23:69.24:0,69,1267	0/0:25,0:25:69.24:0,69,1286	0/0:15,0:15:42.14:0,42,769	0/0:28,0:28:84.29:0,84,1566	0/0:25,0:25:72.18:0,72,1197	0/0:28,0:28:84.23:0,84,1441	0/0:29,0:29:84.29:0,84,1549	0/0:23,0:23:69.22:0,69,1255	0/0:40,0:40:99:0,114,2111	0/0:23,0:23:69.21:0,69,1240	0/0:21,0:21:63.22:0,63,1163	0/0:27,0:27:72.25:0,72,1340	0/0:40,0:40:99:0,120,2093	0/0:24,0:24:69.23:0,69,1254	0/0:16,0:16:45.15:0,45,837	0/0:34,0:34:99:0,102,1881	0/0:23,0:23:69.24:0,69,1273	1/1:0,13:13:39.08:834,39,0	0/0:22,0:22:66.23:0,66,1212	1/1:0,3:5:9.03:211,9,0
chr10	99001287	.	GTC	G	320.09	PASS	AB=0.961;AC=20;AF=0.385;AN=52;BaseQRankSum=3.249;DP=614;FS=3.669;HRun=0;HaplotypeScore=80.2789;InbreedingCoeff=-0.3054;MQ=50.77;MQ0=32;MQRankSum=-0.486;QD=0.81;ReadPosRankSum=0.669;VQSLOD=1.5859;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:31:5.42:0,5,23	0/1:12,0:12:2.94:3,0,173	./.	./.	0/1:23,1:22:22.48:22,0,83	0/0:24,0:24:26.53:0,27,219	0/0:21,4:24:26.92:0,27,225	1/1:21,0:21:11.86:80,12,0	0/1:16,0:16:11.46:11,0,153	0/0:18,0:16:35.79:0,36,340	0/1:20,0:20:18.36:18,0,140	0/1:21,0:21:60.01:60,0,301	0/1:20,0:18:8.96:9,0,327	0/1:19,2:21:7.63:8,0,212	0/0:31,0:31:22.38:0,22,523	0/0:16,0:16:2.98:0,3,22	0/1:33,0:35:45.41:45,0,414	1/1:5,0:5:2.99:23,3,0	0/1:27,0:25:15.48:15,0,153	0/1:16,4:19:16.12:16,0,171	0/1:21,6:26:10.88:11,0,167	0/1:29,0:29:26.27:26,0,277	0/1:19,0:17:14.19:14,0,79	0/1:33,3:35:2.52:3,0,429	0/0:21,0:20:20.03:0,20,342	0/1:23,0:22:49.66:96,0,50	0/0:27,1:27:8.69:0,9,508	0/1:13,0:12:9.18:9,0,15
chr10	99001291	.	C	CTG	85.40	PASS	AB=0.944;AC=6;AF=0.111;AN=54;BaseQRankSum=3.539;DP=609;FS=3.112;HRun=0;HaplotypeScore=84.4193;InbreedingCoeff=0.2876;MQ=50.60;MQ0=31;MQRankSum=-1.002;QD=0.73;ReadPosRankSum=-2.502;VQSLOD=1.2495;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:32:15.22:15,0,16	0/0:12,0:12:26.26:0,26,307	0/0:5,0:1:3.01:0,3,42	./.	0/1:17,7:22:11.23:11,0,87	0/0:23,0:23:44.92:0,45,498	0/0:25,0:24:41.69:0,42,446	0/0:24,0:24:11.74:0,12,276	0/0:15,0:15:36.01:0,36,417	0/0:16,0:14:40.36:0,40,531	0/0:23,0:23:35.56:0,36,340	0/1:22,0:21:1.83:2,0,518	0/0:21,0:19:44.23:0,44,541	0/0:21,0:21:53.72:0,54,584	0/0:29,0:29:77.87:0,78,938	1/1:16,0:16:17.95:166,18,0	0/0:35,0:35:29.19:0,29,859	0/0:5,0:5:8.99:0,9,75	0/0:27,0:25:71.66:0,72,615	0/0:19,0:18:26.78:0,27,310	0/0:27,0:26:50.74:0,51,480	0/0:31,0:29:38.21:0,38,643	0/1:21,0:19:0.63:1,0,281	0/0:40,0:38:39.63:0,40,896	0/0:21,0:20:45.08:0,45,560	0/0:23,0:22:50.80:0,51,498	0/0:28,0:27:78.36:0,78,962	0/0:10,0:9:20.95:0,21,228
chr10	99001834	.	C	CT	345.10	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.568;DP=389;FS=19.153;HRun=5;HaplotypeScore=51.1599;InbreedingCoeff=0.9220;MQ=74.18;MQ0=6;MQRankSum=0.252;QD=14.38;ReadPosRankSum=-0.225;VQSLOD=1.5817;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:58.09:0,58,328	0/0:4,0:4:8.99:0,9,74	0/0:26,0:8:11.62:0,12,108	0/0:27,0:19:27.99:0,28,237	0/0:16,0:16:35.06:0,35,283	0/0:6,0:6:11.36:0,11,83	0/0:16,0:17:28.44:0,28,252	1/1:1,9:9:23.79:206,24,0	0/0:12,0:12:29.60:0,30,226	0/0:9,0:9:19.63:0,20,157	0/0:10,0:12:26.94:0,27,222	0/0:15,0:15:36.40:0,36,304	0/0:8,0:8:16.51:0,17,125	0/0:15,0:16:29.57:0,30,255	0/0:17,0:17:41.72:0,42,294	0/0:19,0:19:41.65:0,42,192	0/0:18,0:18:43.15:0,43,316	0/0:18,0:18:25.98:0,26,110	0/0:9,0:9:23.91:0,24,192	0/0:6,0:9:17.27:0,17,122	0/0:16,0:16:38.86:0,39,306	0/0:7,0:7:18.49:0,18,175	0/0:6,0:6:14.57:0,15,120	0/0:20,0:19:41.57:0,42,336	0/0:10,0:10:23.95:0,24,211	1/1:3,7:10:20.67:183,21,0	0/0:12,0:12:30.74:0,31,196	1/1:3,1:4:11.93:94,12,0
chr10	99001840	.	C	CT	1742.24	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-7.875;DP=382;FS=19.113;HRun=0;HaplotypeScore=44.0111;InbreedingCoeff=0.7823;MQ=68.28;MQ0=8;MQRankSum=-0.251;QD=17.96;ReadPosRankSum=9.830;VQSLOD=2.7393;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:31:64.61:797,65,0	0/0:5,0:5:12:0,12,104	0/1:26,0:6:7.84:8,0,71	0/0:26,0:17:32.30:0,32,238	0/0:15,0:15:26.95:0,27,245	0/0:5,0:5:9:0,9,81	0/0:18,0:18:50.99:0,51,439	0/0:9,0:8:11.25:0,11,37	0/0:9,0:9:26.97:0,27,230	0/0:11,0:11:21.55:0,22,188	0/0:13,0:13:25.26:0,25,221	0/0:15,0:15:38.98:0,39,340	0/0:8,0:8:17.96:0,18,147	0/0:15,0:15:32.94:0,33,280	0/0:15,0:15:44.93:0,45,425	1/1:1,18:20:51.16:635,51,0	0/0:17,0:17:43.08:0,43,337	1/1:4,15:20:38.94:448,39,0	0/0:6,0:5:14.98:0,15,137	0/0:9,0:9:14.97:0,15,125	0/0:17,0:17:29.97:0,30,256	0/0:6,0:6:13.84:0,14,140	0/0:5,0:5:12:0,12,115	0/0:21,0:20:44.97:0,45,389	0/0:10,0:10:20.94:0,21,193	0/0:11,0:11:15.56:0,16,68	0/0:14,0:14:40.47:0,40,336	0/0:4,0:4:11.23:0,11,53
chr10	99002266	.	T	TG	1765.40	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.289;DP=600;FS=5.434;HRun=4;HaplotypeScore=56.0883;InbreedingCoeff=0.9969;MQ=68.77;MQ0=0;MQRankSum=-1.458;QD=34.62;ReadPosRankSum=-2.121;VQSLOD=3.3731;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,1181	0/0:13,0:13:33.09:0,33,374	0/0:23,0:23:34.09:0,34,648	0/0:24,0:23:54.13:0,54,596	0/0:25,0:25:66.17:0,66,739	0/0:22,0:22:60.16:0,60,671	0/0:20,0:20:51.14:0,51,578	1/1:2,22:24:63.17:841,63,0	0/0:16,0:16:48.12:0,48,534	0/0:23,0:23:69.19:0,69,775	0/0:19,0:19:54.14:0,54,603	0/0:19,0:19:54.15:0,54,612	0/0:14,0:14:42.10:0,42,466	0/0:15,0:15:45.11:0,45,500	0/0:23,0:23:66.19:0,66,749	0/0:20,0:20:60.13:0,60,666	0/0:28,0:28:75.18:0,75,830	0/0:28,0:27:81.23:0,81,919	0/0:16,0:16:39.11:0,39,442	0/0:20,0:20:51.14:0,51,579	0/0:30,0:30:87.21:0,87,973	0/0:21,0:21:57.16:0,57,646	0/0:19,0:19:57.16:0,57,646	0/0:14,0:14:42.12:0,42,476	0/0:25,0:25:75.21:0,75,850	1/1:1,20:21:60.20:820,60,0	0/0:34,0:34:99:0,99,1123	1/1:0,6:6:18.06:246,18,0
chr10	99002538	.	C	CTG	905.86	PASS	AB=0.925;AC=13;AF=0.250;AN=52;BaseQRankSum=3.623;DP=639;FS=8.080;HRun=0;HaplotypeScore=100.8722;InbreedingCoeff=0.1973;MQ=63.84;MQ0=29;MQRankSum=-0.623;QD=3.79;ReadPosRankSum=-3.524;VQSLOD=0.7321;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:45,2:46:99:399,0,116	0/0:11,0:11:5.85:0,6,46	./.	./.	0/1:20,0:21:2.17:2,0,195	0/0:18,0:21:8.41:0,8,79	0/0:20,0:20:9:0,9,89	1/1:20,0:20:14.52:113,15,0	0/0:21,0:20:21.52:0,22,229	0/0:16,0:15:8.77:0,9,77	0/0:10,0:10:9:0,9,88	0/0:16,0:16:18.04:0,18,196	0/1:13,0:13:47.03:77,0,47	0/0:15,0:15:17.85:0,18,160	0/1:18,1:19:17.08:17,0,234	0/0:8,0:14:9.24:0,9,73	0/1:20,1:21:5.58:6,0,339	0/1:22,12:39:99:245,0,109	0/0:18,0:18:8.65:0,9,77	0/1:18,1:19:26.78:27,0,118	0/0:31,0:34:32.86:0,33,318	0/0:22,0:24:14.85:0,15,129	0/0:21,0:20:18.05:0,18,195	0/0:28,0:27:32.91:0,33,337	0/0:14,0:15:17.88:0,18,176	1/1:27,0:25:12.33:129,12,0	0/0:22,0:22:23.89:0,24,242	1/1:13,0:9:3.01:42,3,0
chr10	99002579	.	TGAGCGCC	T	563.16	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=4.123;DP=591;FS=0.898;HRun=0;HaplotypeScore=135.5809;InbreedingCoeff=0.7907;MQ=56.11;MQ0=18;MQRankSum=-0.673;QD=18.17;ReadPosRankSum=-2.502;VQSLOD=2.9587;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:54:79.42:0,79,3083	0/0:9,0:9:21.50:0,22,594	0/0:24,0:7:10.90:0,11,293	0/0:22,0:5:10.41:0,10,195	0/0:23,0:23:66.21:0,66,2239	0/0:11,0:11:24.08:0,24,794	0/0:25,0:25:67.57:0,68,2168	1/1:7,0:7:5.81:51,6,0	0/0:18,0:18:45.14:0,45,1523	0/0:25,0:25:75.06:0,75,2247	0/0:17,0:17:39.13:0,39,1200	0/0:24,0:23:63.17:0,63,2050	0/0:13,0:13:39.13:0,39,1209	0/0:16,0:16:39.10:0,39,1083	0/0:16,0:16:42.60:0,43,1384	0/0:12,0:12:26.17:0,26,439	0/0:32,0:31:87.30:0,87,3048	0/0:28,0:28:0.52:0,1,1115	0/0:18,0:18:53.33:0,53,1662	0/0:19,0:19:46.02:0,46,1677	0/0:39,0:38:89.26:0,89,2967	0/0:17,0:17:39.10:0,39,1100	0/0:16,0:16:42.13:0,42,1283	0/0:38,0:37:93.79:0,94,3103	0/0:14,0:14:39.61:0,40,1329	1/1:13,11:21:30.06:623,30,0	0/0:25,0:25:66.19:0,66,2064	./.
chr10	99002584	.	GC	G	102.12	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=5.185;DP=560;FS=6.629;HRun=2;HaplotypeScore=75.6538;InbreedingCoeff=0.8641;MQ=59.62;MQ0=13;MQRankSum=-0.411;QD=6.01;ReadPosRankSum=-0.430;VQSLOD=0.2858;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,1:49:92.90:0,93,1554	0/0:11,0:11:32.94:0,33,422	0/0:22,0:7:10.92:0,11,158	0/0:21,0:7:11.51:0,12,133	0/0:21,0:21:61.45:0,61,887	0/0:10,0:10:27.04:0,27,355	0/0:24,0:24:65.90:0,66,935	1/1:1,1:2:3.01:38,3,0	0/0:18,1:19:51.13:0,51,722	0/0:24,0:24:72.19:0,72,990	0/0:16,0:16:42.14:0,42,596	0/0:23,0:22:60.20:0,60,851	0/0:13,0:13:39.13:0,39,549	0/0:13,0:13:33.09:0,33,457	0/0:16,0:16:45.15:0,45,653	0/0:12,0:12:33.06:0,33,412	0/0:31,0:30:90.30:0,90,1308	0/0:28,0:28:49.70:0,50,586	0/0:22,0:22:66.01:0,66,910	0/0:20,0:20:55.06:0,55,765	0/0:38,0:37:93.30:0,93,1323	0/0:14,0:14:36.12:0,36,517	0/0:15,0:15:42.13:0,42,589	0/0:38,0:38:99:0,100,1385	0/0:14,0:14:39.13:0,39,572	1/1:12,3:12:25.30:172,25,0	0/0:25,0:25:71.27:0,71,998	./.
chr10	99002690	.	GA	G	255.74	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.323;DP=596;FS=9.243;HRun=1;HaplotypeScore=72.6597;InbreedingCoeff=0.9952;MQ=95.93;MQ0=0;MQRankSum=-8.566;QD=7.52;ReadPosRankSum=0.223;VQSLOD=-0.0746;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.19:0,81,1261	0/0:15,0:15:45.14:0,45,688	0/0:37,0:37:99:0,102,1597	0/0:25,0:25:72.13:0,72,1089	0/0:15,0:15:45.15:0,45,719	0/0:17,0:17:51.17:0,51,814	0/0:16,0:16:45.14:0,45,688	1/1:3,8:11:28.25:149,28,0	0/0:27,0:27:81.28:0,81,1294	0/0:30,0:30:87.30:0,87,1389	0/0:15,0:15:42.09:0,42,672	0/0:20,0:20:57.18:0,57,884	0/0:10,0:10:24.08:0,24,384	0/0:16,0:16:45.15:0,45,719	0/0:24,0:23:72.25:0,72,1151	0/0:17,0:17:48.16:0,48,763	0/0:31,0:31:93.32:0,93,1483	0/0:30,0:30:90.31:0,90,1432	0/0:15,0:15:45.15:0,45,720	0/0:24,0:24:72.25:0,72,1151	0/0:39,0:39:99:0,117,1844	0/0:12,0:12:36.12:0,36,571	0/0:18,0:18:48.16:0,48,766	0/0:28,0:28:81.28:0,81,1283	0/0:31,0:31:90.29:0,90,1387	1/1:4,13:16:32.91:162,33,0	0/0:22,0:21:66.21:0,66,1032	1/1:0,6:6:17.06:86,17,0
chr10	99002692	.	GC	G	228.56	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.750;DP=595;FS=9.624;HRun=1;HaplotypeScore=72.0871;InbreedingCoeff=0.9949;MQ=95.29;MQ0=0;MQRankSum=-8.102;QD=7.37;ReadPosRankSum=0.609;VQSLOD=-0.0296;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.25:0,81,1262	0/0:13,0:13:39.12:0,39,600	0/0:37,0:37:99:0,102,1548	0/0:23,0:23:69.23:0,69,1070	0/0:15,0:15:45.15:0,45,716	0/0:18,0:18:54.17:0,54,830	0/0:19,0:19:54.08:0,54,740	1/1:1,8:9:25.26:125,25,0	0/0:27,0:27:81.26:0,81,1264	0/0:28,0:28:78.27:0,78,1246	0/0:15,0:15:42.14:0,42,669	0/0:19,0:19:57.18:0,57,882	0/0:8,0:8:24.08:0,24,383	0/0:16,0:16:45.10:0,45,659	0/0:24,0:23:72.25:0,72,1150	0/0:18,0:18:51.15:0,51,764	0/0:32,0:32:96.27:0,96,1455	0/0:30,0:30:87.24:0,87,1331	0/0:15,0:15:45.15:0,45,719	0/0:25,0:25:75.24:0,75,1163	0/0:40,0:40:99:0,117,1820	0/0:12,0:12:36.12:0,36,575	0/0:18,0:18:48.15:0,48,735	0/0:31,0:31:90.16:0,90,1329	0/0:30,0:30:87.30:0,87,1390	1/1:3,13:15:33.59:159,34,0	0/0:22,0:21:66.22:0,66,1050	1/1:0,6:6:17.06:86,17,0
chr10	99002696	.	GC	G	243.01	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.781;DP=591;FS=12.866;HRun=1;HaplotypeScore=72.0496;InbreedingCoeff=0.9949;MQ=96.20;MQ0=0;MQRankSum=-7.630;QD=9.00;ReadPosRankSum=0.083;VQSLOD=-0.2708;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.27:0,84,1315	0/0:12,0:12:36.12:0,36,573	0/0:36,2:38:39.41:0,39,1453	0/0:27,0:27:78.20:0,78,1140	0/0:19,0:19:57.18:0,57,888	0/0:17,0:17:51.17:0,51,812	0/0:18,0:18:54.18:0,54,860	1/1:0,8:8:23.13:127,23,0	0/0:24,0:24:72.25:0,72,1148	0/0:30,0:30:87.30:0,87,1387	0/0:16,0:16:45.15:0,45,713	0/0:23,0:23:69.22:0,69,1080	0/0:9,0:9:27.09:0,27,431	0/0:12,0:12:33.08:0,33,501	0/0:23,0:22:69.22:0,69,1075	0/0:17,0:17:45.15:0,45,719	0/0:28,0:28:84.29:0,84,1343	0/0:25,0:25:75.26:0,75,1199	0/0:18,0:18:51.14:0,51,746	0/0:25,0:25:75.26:0,75,1196	0/0:38,0:38:99:0,111,1775	0/0:14,0:14:42.14:0,42,671	0/0:17,0:17:42.14:0,42,671	0/0:30,0:30:87.30:0,87,1391	0/0:31,0:31:90.31:0,90,1436	1/1:0,13:12:34.02:170,34,0	0/0:23,0:22:69.23:0,69,1090	1/1:0,6:6:17.10:88,17,0
chr10	99002698	.	AGTT	A	843.84	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.774;DP=593;FS=11.264;HRun=0;HaplotypeScore=94.7234;InbreedingCoeff=0.9958;MQ=97.49;MQ0=0;MQRankSum=-8.010;QD=31.25;ReadPosRankSum=0.451;VQSLOD=3.6805;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.25:0,87,1991	0/0:13,0:13:39.13:0,39,959	0/0:39,0:39:86.91:0,87,2265	0/0:30,0:30:90.26:0,90,2016	0/0:19,0:19:57.20:0,57,1373	0/0:17,0:17:51.18:0,51,1255	0/0:18,0:18:54.19:0,54,1322	1/1:0,8:8:24.08:309,24,0	0/0:23,0:23:69.24:0,69,1698	0/0:30,0:30:87.30:0,87,2152	0/0:15,0:15:45.15:0,45,1109	0/0:24,0:24:72.25:0,72,1753	0/0:9,0:9:27.07:0,27,611	0/0:12,0:12:33.11:0,33,798	0/0:22,0:21:66.23:0,66,1605	0/0:17,0:17:51.17:0,51,1209	0/0:28,0:28:84.29:0,84,2071	0/0:25,0:25:75.24:0,75,1735	0/0:16,0:16:45.15:0,45,1108	0/0:25,0:25:75.26:0,75,1825	0/0:38,0:38:99:0,111,2737	0/0:14,0:14:42.14:0,42,1024	0/0:18,0:18:48.16:0,48,1155	0/0:31,0:31:90.31:0,90,2187	0/0:31,0:31:93.26:0,93,2169	1/1:0,13:12:36.11:448,36,0	0/0:22,0:21:66.23:0,66,1602	1/1:0,6:6:18.06:228,18,0
chr10	99003469	.	TTCATCCTGGA	T	3426.76	PASS	AB=0.538;AC=5;AF=0.089;AN=56;BaseQRankSum=9.612;DP=661;FS=3.029;HRun=0;HaplotypeScore=198.2108;InbreedingCoeff=0.7753;MQ=77.78;MQ0=0;MQRankSum=-7.435;QD=72.91;ReadPosRankSum=-0.408;VQSLOD=3.5618;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,151,7909	0/0:18,0:18:54.19:0,54,2805	0/0:14,0:15:36.58:0,37,937	0/0:14,0:15:26.46:0,26,1120	0/0:20,0:20:60.21:0,60,2966	0/0:16,0:16:48.16:0,48,2309	0/0:29,0:29:87.27:0,87,4184	1/1:6,12:18:36.11:1041,36,0	0/0:34,0:34:99:0,102,5217	0/0:22,0:22:66.23:0,66,3454	0/0:9,0:9:27.09:0,27,1379	0/0:30,0:30:90.31:0,90,4544	0/0:21,0:21:63.22:0,63,3231	0/0:26,0:26:75.26:0,75,3772	0/0:14,0:14:42.13:0,42,2112	0/0:31,0:31:90.31:0,90,4448	0/0:34,0:34:96.33:0,96,4936	0/0:26,0:26:75.26:0,75,3616	0/0:29,0:29:84.29:0,84,4124	0/0:16,0:16:45.15:0,45,2420	0/0:50,0:50:99:0,147,7436	0/0:20,0:20:60.21:0,60,3182	0/0:10,0:10:30.10:0,30,1611	0/0:38,0:37:99:0,108,5565	0/0:22,0:22:66.22:0,66,3398	0/1:3,18:21:99:1775,0,105	0/0:18,0:17:51.17:0,51,2622	1/1:0,8:8:18.06:611,18,0
chr10	99004037	.	GCTTTCTTCCTTCCTTCCTTC	G	1885.81	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=3.919;DP=571;FS=6.399;HRun=0;HaplotypeScore=304.5734;InbreedingCoeff=0.2463;MQ=61.46;MQ0=5;MQRankSum=-2.797;QD=16.26;ReadPosRankSum=0.279;VQSLOD=1.3047;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:34.18:34,0,1230	0/0:14,0:14:42.07:0,42,2500	0/0:7,0:6:18.03:0,18,178	0/0:16,0:14:33:0,33,415	0/0:20,0:20:60.18:0,60,4518	0/0:15,0:15:42.06:0,42,1821	0/0:28,0:28:84.08:0,84,3282	1/1:17,15:28:71.76:798,72,0	0/0:13,0:13:39.11:0,39,2391	0/0:28,0:28:83.46:0,83,4863	0/0:13,0:13:33.11:0,33,2696	0/0:19,0:19:51.14:0,51,2784	0/0:17,0:17:45.15:0,45,3052	0/0:17,0:17:45.14:0,45,2859	0/0:21,0:21:60.13:0,60,3266	0/0:17,0:17:10.85:0,11,1106	0/0:36,0:36:99:0,102,5820	0/1:12,0:12:99:174,0,566	0/0:24,0:23:69.06:0,69,2286	0/0:15,0:15:42.09:0,42,2397	0/0:32,0:32:93.13:0,93,3620	0/0:13,0:13:36.09:0,36,2324	0/0:17,0:17:48.12:0,48,3031	0/0:25,0:25:69.19:0,69,4206	0/0:20,0:20:60.16:0,60,4280	0/1:24,0:24:99:552,0,1360	0/0:28,0:28:84.22:0,84,5195	0/1:20,0:20:99:458,0,476
chr10	99005519	.	CT	C	1186	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.001;DP=584;FS=0.000;HRun=10;HaplotypeScore=62.4864;InbreedingCoeff=0.9960;MQ=67.02;MQ0=3;MQRankSum=-0.225;QD=16.25;ReadPosRankSum=-1.385;VQSLOD=3.5148;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:84.18:0,84,902	0/0:10,0:11:29.89:0,30,296	0/0:27,1:18:26.30:0,26,226	0/0:34,0:17:30.81:0,31,279	0/0:29,1:30:58.17:0,58,869	0/0:16,1:17:25.06:0,25,494	0/0:22,0:22:34.43:0,34,601	1/1:8,17:26:52.92:434,53,0	0/0:28,0:28:69.16:0,69,745	0/0:15,0:14:39.11:0,39,431	0/0:22,0:22:57.14:0,57,620	0/0:18,1:19:25.06:0,25,486	0/0:12,0:12:29.95:0,30,313	0/0:22,1:23:36.84:0,37,608	0/0:23,0:23:60.16:0,60,663	0/0:19,0:19:45.10:0,45,482	0/0:26,0:26:66.18:0,66,727	0/0:9,0:9:27.07:0,27,299	0/0:20,0:20:22.11:0,22,469	0/0:22,2:24:37.11:0,37,633	0/0:13,0:13:36.10:0,36,398	0/0:17,0:17:45.12:0,45,496	0/0:14,0:14:39.11:0,39,431	0/0:18,0:21:56.82:0,57,592	0/0:16,0:16:45.12:0,45,496	1/1:5,25:30:65.95:573,66,0	0/0:13,0:13:36.08:0,36,389	1/1:5,12:17:38.59:323,39,0
chr10	99008205	.	A	AGTGT	2513.56	PASS	AB=0.879;AC=10;AF=0.192;AN=52;BaseQRankSum=0.406;DP=689;FS=10.385;HRun=0;HaplotypeScore=135.3721;InbreedingCoeff=0.5018;MQ=60.73;MQ0=7;MQRankSum=-3.578;QD=12.32;ReadPosRankSum=-1.189;VQSLOD=2.6735;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:48:86.44:86,0,145	0/0:6,0:7:15.04:0,15,216	./.	./.	0/0:13,0:16:24.04:0,24,296	0/0:16,0:17:33.11:0,33,498	0/0:34,0:35:30.08:0,30,426	0/1:25,0:25:18.66:287,0,19	0/0:27,0:27:53.93:0,54,825	0/0:33,0:35:34.24:0,34,509	0/0:14,0:16:27.08:0,27,386	0/0:22,0:23:51.79:0,52,825	0/1:31,0:35:8.36:8,0,787	0/0:28,0:28:45.13:0,45,682	0/0:30,0:31:57.19:0,57,868	1/1:14,5:26:33.11:640,33,0	0/0:29,0:30:54.17:0,54,824	1/1:10,10:23:38.60:749,39,0	0/0:18,0:18:12.03:0,12,167	0/0:15,0:17:27:0,27,354	0/0:34,0:38:36.32:0,36,457	0/0:23,0:26:29.65:0,30,549	0/0:11,0:13:17.88:0,18,264	0/0:42,0:43:47.34:0,47,945	0/0:13,0:13:12.04:0,12,187	0/1:20,4:28:26.26:423,0,26	0/0:18,0:17:39.08:0,39,520	1/1:10,8:18:21.07:478,21,0
chr10	99009330	.	CT	C	2341.44	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.953;DP=920;FS=0.993;HRun=1;HaplotypeScore=85.7757;InbreedingCoeff=0.9128;MQ=52.82;MQ0=30;MQRankSum=-2.347;QD=33.45;ReadPosRankSum=-3.237;VQSLOD=2.5738;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,138,2171	0/0:21,0:21:49.41:0,49,768	0/0:33,0:4:9:0,9,115	0/0:59,1:13:21.37:0,21,436	0/0:24,0:23:50.97:0,51,720	0/0:22,0:22:57.19:0,57,907	0/0:33,0:33:84.27:0,84,1297	1/1:0,28:28:81.23:1071,81,0	0/0:33,0:33:93.24:0,93,1429	0/0:48,0:48:99:0,141,2255	0/0:24,0:24:63.21:0,63,1005	0/0:33,0:33:90.31:0,90,1433	0/0:40,0:40:99:0,105,1563	0/0:22,0:22:57.18:0,57,885	0/0:26,0:26:72.25:0,72,1147	0/0:28,0:28:72.23:0,72,1126	0/0:49,0:49:99:0,135,2151	0/0:32,0:32:90.31:0,90,1437	0/0:19,0:18:51.17:0,51,794	0/0:38,0:37:93.27:0,93,1445	0/0:59,0:58:99:0,160,2537	0/0:28,0:28:60.20:0,60,958	0/0:24,0:23:57.19:0,57,910	0/0:43,0:42:99:0,111,1714	0/0:32,0:32:75.26:0,75,1197	1/1:2,34:36:3.32:1150,3,0	0/0:28,0:28:78.21:0,78,1204	1/1:0,6:6:18.06:252,18,0
chr10	99009710	.	T	TC	1711.19	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.607;DP=634;FS=0.000;HRun=6;HaplotypeScore=64.2304;InbreedingCoeff=0.9799;MQ=84.31;MQ0=0;MQRankSum=0.358;QD=29.00;ReadPosRankSum=-2.787;VQSLOD=3.1147;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,114,1154	0/0:4,0:4:12.03:0,12,122	0/0:24,0:24:42.42:0,42,459	0/0:21,0:21:48.29:0,48,414	0/0:14,0:14:32.10:0,32,311	0/0:27,0:27:75.12:0,75,742	0/0:28,0:28:66.14:0,66,668	1/1:3,26:29:78.12:902,78,0	0/0:28,0:28:78.15:0,78,788	0/0:19,0:19:54.12:0,54,550	0/0:11,0:11:33.07:0,33,336	0/0:33,0:33:99:0,99,1002	0/0:34,0:34:93.21:0,93,948	0/0:26,0:26:69.12:0,69,690	0/0:36,0:36:99:0,105,1066	0/0:21,0:21:54.11:0,54,544	0/0:25,0:25:63.14:0,63,642	0/0:27,0:27:69.15:0,69,704	0/0:22,0:22:60.13:0,60,612	0/0:12,0:12:33.07:0,33,337	0/0:44,0:44:99:0,120,1217	0/0:14,0:14:39.08:0,39,398	0/0:9,0:9:21.04:0,21,214	0/0:21,0:21:57.13:0,57,581	0/0:10,0:10:24.04:0,24,239	1/1:2,14:16:14.30:459,14,0	0/0:22,0:22:66.11:0,66,658	1/1:0,14:14:39.12:491,39,0
chr10	99011409	.	TA	T	1089.51	PASS	AB=0.808;AC=10;AF=0.179;AN=56;BaseQRankSum=6.392;DP=415;FS=0.533;HRun=14;HaplotypeScore=51.3193;InbreedingCoeff=0.6330;MQ=63.53;MQ0=19;MQRankSum=-0.232;QD=9.31;ReadPosRankSum=3.376;VQSLOD=2.7217;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:24:50.55:349,51,0	0/0:6,0:6:12.01:0,12,111	0/0:19,0:11:9.73:0,10,61	0/1:10,0:6:12.01:12,0,27	0/0:20,1:20:18.41:0,18,305	0/0:16,1:19:41.84:0,42,368	0/0:9,1:11:27.95:0,28,227	1/1:3,18:21:44.53:308,45,0	0/0:10,0:10:3.48:0,3,174	0/0:16,0:16:27.01:0,27,245	0/0:13,0:13:24.01:0,24,217	0/0:12,0:12:18.02:0,18,167	0/0:7,1:9:3.23:0,3,152	0/0:10,0:11:20.70:0,21,155	0/0:8,1:10:17.02:0,17,176	0/0:5,0:10:12.35:0,12,65	0/0:34,0:27:57.36:0,57,496	1/1:5,19:25:45.64:299,46,0	0/0:13,0:14:32.78:0,33,275	0/0:11,0:11:12.01:0,12,112	0/0:7,0:5:14.94:0,15,128	0/0:6,1:7:17.95:0,18,150	0/0:5,0:5:3.87:0,4,25	0/0:6,0:6:12.01:0,12,112	0/0:18,0:16:38.99:0,39,351	0/1:12,9:18:47.86:146,0,48	0/0:22,1:24:33.63:0,34,406	1/1:8,5:8:20.76:140,21,0
chr10	99011920	.	CGT	C	647.94	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=5.594;DP=947;FS=2.797;HRun=0;HaplotypeScore=136.5465;InbreedingCoeff=0.8180;MQ=50.59;MQ0=37;MQRankSum=1.371;QD=13.22;ReadPosRankSum=0.437;VQSLOD=3.1662;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,12:24:27.08:346,27,0	0/0:9,0:9:24.08:0,24,387	0/0:70,0:9:24.04:0,24,361	0/0:75,0:16:44.13:0,44,632	0/0:21,0:21:57.19:0,57,936	0/0:26,0:25:51.13:0,51,769	0/0:36,0:36:69.24:0,69,1163	0/0:35,0:29:68.92:0,69,878	0/0:33,0:33:80.83:0,81,1235	0/0:30,0:29:74.28:0,74,1198	0/0:13,0:13:30.10:0,30,504	0/0:55,0:55:99:0,123,1944	0/0:35,0:34:98.93:0,99,1511	0/0:33,0:32:87.21:0,87,1326	0/0:38,0:38:90.99:0,91,1509	0/0:27,0:27:33.11:0,33,529	0/0:35,0:33:87.28:0,87,1399	1/1:7,11:18:33.08:422,33,0	0/0:29,0:23:60.20:0,60,989	0/0:13,0:13:33.11:0,33,556	0/0:107,0:103:99:0,234,3751	0/0:30,0:30:66.23:0,66,1111	0/0:26,0:25:63.19:0,63,1025	0/0:47,0:47:99:0,120,2008	0/0:29,0:29:72.20:0,72,1110	0/0:28,0:28:70.92:0,71,995	0/0:18,0:18:47.55:0,48,733	0/1:6,0:6:5.63:6,0,217
chr10	99011996	.	CGT	C	555.79	PASS	AB=0.632;AC=2;AF=0.036;AN=56;BaseQRankSum=6.796;DP=1111;FS=20.200;HRun=0;HaplotypeScore=132.1357;InbreedingCoeff=-0.0296;MQ=54.51;MQ0=25;MQRankSum=-0.497;QD=12.35;ReadPosRankSum=1.264;VQSLOD=1.7553;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,22:29:18.32:346,0,18	0/0:19,0:19:51.17:0,51,873	0/0:53,0:12:4.34:0,4,243	0/0:56,0:14:33.11:0,33,526	0/0:36,0:36:99:0,101,1606	0/0:28,0:27:75.24:0,75,1250	0/0:46,0:46:99:0,117,1935	0/0:43,0:38:81.16:0,81,1220	0/0:52,0:52:99:0,135,2093	0/0:52,0:52:99:0,141,2264	0/0:20,0:20:60.17:0,60,974	0/0:62,0:62:99:0,165,2624	0/0:49,0:49:99:0,129,2071	0/0:38,0:38:99:0,99,1470	0/0:41,0:41:96.28:0,96,1553	0/0:35,0:35:69.24:0,69,1183	0/0:28,0:28:70.10:0,70,1126	0/1:9,7:16:46.58:298,0,47	0/0:19,0:17:33.06:0,33,475	0/0:32,0:32:90.31:0,90,1535	0/0:139,0:137:99:0,363,5823	0/0:36,0:36:99:0,102,1677	0/0:26,0:26:69.20:0,69,1123	0/0:54,0:54:99:0,130,2097	0/0:32,1:33:50.88:0,51,1389	0/0:35,0:34:93.25:0,93,1531	0/0:24,0:24:60.21:0,60,1021	0/0:10,0:10:18.06:0,18,308
chr10	99012049	.	A	ATG	2751.78	PASS	AB=0.821;AC=12;AF=0.214;AN=56;BaseQRankSum=5.397;DP=1101;FS=7.029;HRun=0;HaplotypeScore=151.6476;InbreedingCoeff=0.7740;MQ=53.49;MQ0=17;MQRankSum=-5.530;QD=15.04;ReadPosRankSum=-4.850;VQSLOD=2.1473;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:26,2:28:3.01:52,3,0	0/0:21,0:21:59.95:0,60,752	0/0:38,0:18:29.76:0,30,326	0/0:41,0:12:24.07:0,24,285	0/0:26,0:26:63.09:0,63,839	0/0:24,0:23:56.47:0,56,758	0/0:49,0:49:99:0,126,1659	1/1:16,12:20:21.07:363,21,0	0/0:51,0:51:99:0,126,1677	0/0:60,0:60:99:0,159,2075	0/0:14,0:13:36.12:0,36,479	0/0:78,0:78:99:0,177,2330	0/0:42,0:42:99:0,111,1462	0/0:38,0:38:93.30:0,93,1235	0/0:42,1:43:99:0,111,1460	1/1:21,23:44:20.15:864,20,0	0/0:34,0:34:83.16:0,83,1149	1/1:13,0:13:2.26:253,2,0	0/1:23,0:17:3.50:3,0,329	0/0:30,0:30:77.90:0,78,1007	0/0:165,0:164:99:0,445,5844	0/0:41,0:41:99:0,114,1518	0/0:26,0:26:63.21:0,63,838	0/0:47,0:47:99:0,114,1467	0/0:37,0:37:87.24:0,87,1138	0/1:15,19:32:1.67:1119,0,2	0/0:13,0:13:36.10:0,36,463	1/1:5,8:13:15.05:259,15,0
chr10	99012050	.	T	TGC	1536.46	PASS	AB=0.933;AC=7;AF=0.125;AN=56;BaseQRankSum=12.037;DP=1111;FS=5.307;HRun=0;HaplotypeScore=156.9448;InbreedingCoeff=0.1924;MQ=53.40;MQ0=17;MQRankSum=-5.858;QD=9.15;ReadPosRankSum=-2.811;VQSLOD=2.5994;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,18:32:5.98:48,6,0	0/0:21,0:21:63.20:0,63,923	0/0:38,0:18:38.86:0,39,483	0/0:40,0:12:25.33:0,25,352	0/0:26,0:26:66.08:0,66,986	0/0:24,0:23:63.11:0,63,921	0/0:50,0:50:99:0,135,1986	0/1:30,0:21:99:161,0,121	0/0:52,0:52:99:0,132,1974	0/0:59,0:59:99:0,172,2529	0/0:13,0:12:36.12:0,36,551	0/0:80,0:80:99:0,192,2826	0/0:42,0:42:99:0,117,1747	0/0:38,0:38:99:0,105,1521	0/0:45,0:45:99:0,120,1771	0/1:44,0:44:62.40:395,0,62	0/0:33,0:34:90.25:0,90,1352	0/1:7,7:14:14.53:379,0,15	0/0:22,0:16:22.26:0,22,444	0/0:31,0:31:83.90:0,84,1235	0/0:166,0:165:99:0,466,6932	0/0:41,0:41:99:0,117,1768	0/0:25,0:25:72.19:0,72,1035	0/0:47,0:47:99:0,123,1808	0/0:36,0:36:93.29:0,93,1378	0/1:35,0:33:99:553,0,130	0/0:13,0:13:36.12:0,36,549	0/1:13,0:13:5.94:131,0,6
chr10	99012078	.	CGT	C	1818.70	PASS	AB=0.780;AC=11;AF=0.196;AN=56;BaseQRankSum=10.067;DP=1117;FS=0.953;HRun=0;HaplotypeScore=169.8331;InbreedingCoeff=0.5656;MQ=53.16;MQ0=22;MQRankSum=-5.611;QD=9.78;ReadPosRankSum=-1.268;VQSLOD=3.2035;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,28:42:28.57:67,0,29	0/0:17,0:17:42.14:0,42,695	0/0:42,1:16:29.86:0,30,469	0/0:51,1:13:29.95:0,30,329	0/0:19,1:20:1.27:0,1,525	0/0:21,0:20:39.07:0,39,616	0/0:52,0:52:91.63:0,92,2022	1/1:7,22:19:48.15:605,48,0	0/0:53,0:53:99:0,132,2131	0/0:49,0:49:93.44:0,93,1677	0/0:15,0:14:39.12:0,39,623	0/0:74,0:74:99:0,149,2720	0/0:49,0:49:99:0,123,1937	0/0:45,0:45:90.73:0,91,1686	0/0:52,0:52:99:0,120,1890	0/0:49,0:49:72.04:0,72,1111	0/1:33,2:37:22.79:23,0,1218	1/1:5,9:14:2.26:178,2,0	0/0:23,1:21:16.37:0,16,728	0/0:23,0:23:57.19:0,57,945	0/0:163,2:166:99:0,301,5733	0/0:31,0:31:66.22:0,66,1092	0/1:21,4:25:47.25:47,0,875	0/0:43,2:45:29.61:0,30,1515	0/0:32,0:32:66.21:0,66,1071	1/1:6,25:30:28.34:873,28,0	0/0:18,0:18:48.08:0,48,706	1/1:0,7:7:15.05:189,15,0
chr10	99012111	.	ATG	A	1296.27	PASS	AB=0.976;AC=8;AF=0.143;AN=56;BaseQRankSum=10.088;DP=1081;FS=5.643;HRun=0;HaplotypeScore=178.8245;InbreedingCoeff=0.7214;MQ=53.02;MQ0=29;MQRankSum=-6.895;QD=11.37;ReadPosRankSum=0.092;VQSLOD=3.0535;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,1:43:9.02:0,9,99	0/0:14,0:14:24.78:0,25,434	0/0:26,0:10:8.53:0,9,101	0/0:38,1:10:17.14:0,17,158	0/0:17,0:17:24.61:0,25,397	0/1:19,1:20:0.87:1,0,554	0/0:47,1:48:57.16:0,57,1470	1/1:22,12:25:30.56:392,31,0	0/0:62,0:62:99:0,140,2162	0/0:46,1:46:67.62:0,68,1457	0/0:15,0:15:45.14:0,45,687	0/0:64,3:67:75.38:0,75,2056	0/0:44,0:44:99:0,111,1571	0/0:41,1:42:50.37:0,50,1223	0/0:50,0:50:99:0,110,1710	0/0:51,0:50:99:0,117,1276	0/0:43,0:42:91.40:0,91,1397	0/1:17,0:17:16.09:16,0,186	0/0:27,1:22:20.12:0,20,743	0/0:27,0:27:66.19:0,66,1016	0/0:149,2:149:99:0,277,4480	0/0:26,0:26:51.17:0,51,810	0/0:25,0:25:48.13:0,48,716	0/0:46,0:46:99:0,105,1621	0/0:30,0:30:69.22:0,69,1069	1/1:10,26:36:27.67:884,28,0	0/0:25,0:25:61.05:0,61,1015	1/1:3,4:7:12.04:148,12,0
chr10	99012117	.	GTGTGTGTGTGTA	G	419.16	PASS	AB=0.955;AC=4;AF=0.074;AN=54;BaseQRankSum=5.013;DP=1098;FS=11.594;HRun=0;HaplotypeScore=381.7652;InbreedingCoeff=0.5515;MQ=52.92;MQ0=30;MQRankSum=-4.797;QD=4.32;ReadPosRankSum=-1.556;VQSLOD=0.5497;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:47,8:54:5.99:48,6,0	0/0:11,0:11:21.07:0,21,954	0/1:22,0:10:0:0,0,0	./.	0/0:16,0:16:19:0,19,790	0/0:21,0:21:39.59:0,40,1709	0/0:44,0:44:75.19:0,75,2909	0/0:39,0:30:33.70:0,34,588	0/0:61,0:61:99:0,129,5522	0/0:48,0:47:99:0,105,4038	0/0:17,0:17:45.14:0,45,1856	0/0:71,0:71:99:0,159,6181	0/0:46,0:46:99:0,99,3969	0/0:43,0:43:90.29:0,90,3741	0/0:49,0:49:87.27:0,87,3834	0/0:52,0:51:88.17:0,88,3438	0/0:43,0:42:82.44:0,82,3568	0/1:18,2:20:32.70:465,0,33	0/0:29,0:23:44.08:0,44,1755	0/0:27,0:27:50.99:0,51,2266	0/0:149,0:147:99:0,235,9997	0/0:27,0:27:42.14:0,42,1810	0/0:26,0:26:36.04:0,36,1341	0/0:46,0:46:93.38:0,93,3809	0/0:28,0:28:38.93:0,39,2072	0/0:35,0:35:71.89:0,72,1722	0/0:27,0:27:48.90:0,49,2727	0/0:8,0:7:11.92:0,12,202
chr10	99012141	.	A	ATG	951.33	PASS	AB=0.579;AC=3;AF=0.054;AN=56;BaseQRankSum=6.864;DP=1044;FS=1.477;HRun=0;HaplotypeScore=179.1080;InbreedingCoeff=0.2599;MQ=57.02;MQ0=23;MQRankSum=0.481;QD=19.41;ReadPosRankSum=1.860;VQSLOD=4.0933;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:55:13.23:0,13,150	0/0:11,0:11:27.08:0,27,323	0/0:21,0:10:15.96:0,16,134	0/0:23,0:6:3.01:0,3,103	0/0:19,0:19:44.82:0,45,525	0/0:18,0:19:38.67:0,39,431	0/0:47,0:47:99:0,102,1205	0/0:42,0:36:63.12:0,63,713	0/0:56,0:56:99:0,117,1401	0/0:53,0:55:99:0,126,1457	0/0:18,0:18:36.11:0,36,431	0/0:72,0:72:99:0,156,1829	0/0:43,0:46:62.67:0,63,671	0/0:43,0:43:87.26:0,87,1041	0/0:44,0:44:92.87:0,93,1088	0/1:12,31:42:29.64:1025,0,30	0/0:42,0:41:52.47:0,52,812	0/0:24,0:24:5.61:0,6,198	0/0:30,0:23:44.63:0,45,529	0/0:23,0:26:59.83:0,60,664	0/0:116,0:114:99:0,200,2362	0/0:19,0:20:50.99:0,51,589	0/0:17,0:17:30.09:0,30,359	0/0:47,0:48:63.07:0,63,933	0/0:26,0:26:38.87:0,39,451	0/0:39,0:39:80.28:0,80,958	0/0:30,0:31:75.05:0,75,863	1/1:5,0:4:0.89:2,1,0
chr10	99013044	.	AG	A	3112.11	PASS	AC=50;AF=1.000;AN=50;DP=167;FS=0.000;HRun=2;HaplotypeScore=20.3114;InbreedingCoeff=-0.0698;MQ=29.03;MQ0=4;QD=21.03;VQSLOD=3.1712;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:8:6.02:78,6,0	1/1:0,1:1:3.01:39,3,0	./.	./.	1/1:0,4:3:6.02:78,6,0	1/1:0,11:7:15.05:194,15,0	1/1:1,9:6:9.03:117,9,0	./.	1/1:1,6:7:15.05:194,15,0	1/1:0,8:4:12.04:156,12,0	1/1:0,3:3:3.01:39,3,0	1/1:0,8:6:15.05:195,15,0	1/1:0,8:5:15.05:194,15,0	1/1:1,4:4:9.03:117,9,0	1/1:0,4:3:6.02:78,6,0	1/1:1,5:4:9.03:117,9,0	1/1:0,10:8:15.05:194,15,0	1/1:0,4:4:12.04:156,12,0	1/1:0,5:1:3.01:39,3,0	1/1:0,4:2:3.01:39,3,0	1/1:0,8:6:12.04:155,12,0	1/1:0,3:2:6.02:78,6,0	1/1:1,5:5:12.04:155,12,0	1/1:0,7:7:18.06:233,18,0	1/1:0,4:4:12.04:156,12,0	1/1:0,4:4:9.03:117,9,0	1/1:0,7:7:14.99:194,15,0	1/1:0,2:2:6.02:78,6,0
chr10	99013414	.	A	AG	453.95	PASS	AC=12;AF=1.000;AN=12;DP=44;FS=0.000;HRun=0;HaplotypeScore=10.4462;MQ=28.84;MQ0=3;QD=19.74;VQSLOD=4.7753;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:3:6.02:96,6,0	./.	./.	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:48,3,0	./.	./.	./.	1/1:0,2:1:3.01:48,3,0	1/1:0,5:4:3.01:48,3,0	./.	./.	./.	./.	./.	./.	1/1:0,8:6:15.05:239,15,0	./.	./.	./.	./.	./.	1/1:1,0:1:3.01:44,3,0	./.
chr10	99013690	.	ATACT	A	3561.04	PASS	AB=0.542;AC=11;AF=0.196;AN=56;BaseQRankSum=10.893;DP=444;FS=0.543;HRun=0;HaplotypeScore=68.5385;InbreedingCoeff=0.8199;MQ=90.39;MQ0=0;MQRankSum=-4.005;QD=40.01;ReadPosRankSum=2.289;VQSLOD=3.8836;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:56.79:1136,57,0	0/0:3,0:3:9.03:0,9,250	0/0:22,0:22:66.19:0,66,1409	0/0:14,0:14:42.09:0,42,939	0/0:15,0:15:41.69:0,42,941	0/0:8,0:8:21.05:0,21,527	0/0:21,0:21:63.18:0,63,1570	1/1:1,15:16:36.01:667,36,0	0/0:12,0:12:36.07:0,36,760	0/0:15,0:15:45.02:0,45,1190	0/0:3,0:3:9.03:0,9,252	0/0:19,0:19:54.09:0,54,1325	0/0:10,0:10:30.05:0,30,603	0/0:15,0:15:42.12:0,42,1056	0/0:21,0:21:63.14:0,63,1578	1/1:0,10:10:21.07:419,21,0	0/0:36,0:36:99:0,108,2623	1/1:0,22:22:42.14:838,42,0	0/0:10,0:10:30.09:0,30,718	0/0:9,0:9:27.06:0,27,635	0/0:42,0:42:99:0,123,2892	0/0:12,0:12:36.09:0,36,886	0/0:9,0:9:24.01:0,24,488	0/0:35,0:35:99:0,102,2518	0/0:14,0:13:42.06:0,42,1043	0/1:2,11:13:74.89:443,0,75	0/0:10,0:10:30.05:0,30,716	1/1:0,2:2:3.01:59,3,0
chr10	99014209	.	GTCTC	G	729.42	PASS	AB=0.592;AC=9;AF=0.161;AN=56;BaseQRankSum=6.736;DP=619;FS=0.804;HRun=0;HaplotypeScore=112.5091;InbreedingCoeff=0.8918;MQ=69.89;MQ0=11;MQRankSum=-1.579;QD=7.76;ReadPosRankSum=0.779;VQSLOD=2.2787;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,19:29:0.12:0,0,0	0/0:4,0:4:10.28:0,10,221	0/0:39,0:23:26.73:0,27,454	0/0:29,0:26:27.16:0,27,587	0/0:16,0:16:36.12:0,36,864	0/0:18,0:18:37.94:0,38,865	0/0:25,0:24:51.17:0,51,1198	1/1:8,0:20:23.15:198,23,0	0/0:25,0:26:68.97:0,69,1540	0/0:23,0:23:48.14:0,48,986	0/0:17,0:17:42.14:0,42,990	0/0:24,0:27:65.24:0,65,1409	0/0:20,0:20:42.11:0,42,836	0/0:21,0:21:45.14:0,45,1031	0/0:28,0:28:69.13:0,69,1523	0/0:17,0:17:24.06:0,24,517	0/0:31,0:31:68.72:0,69,1510	1/1:12,1:15:18.06:300,18,0	0/0:22,0:21:44.81:0,45,836	0/0:17,0:17:45.13:0,45,967	0/0:36,0:33:73.47:0,73,1614	0/0:17,0:17:41.51:0,42,922	0/0:16,0:17:32.09:0,32,649	0/0:30,0:30:74.74:0,75,1555	0/0:21,0:22:50.90:0,51,1074	1/1:20,0:21:23.21:350,23,0	0/0:22,0:21:41.74:0,42,899	1/1:6,0:9:3.01:30,3,0
chr10	99014231	.	ATG	A	139.95	PASS	AB=0.962;AC=8;AF=0.154;AN=52;BaseQRankSum=2.771;DP=649;FS=4.901;HRun=0;HaplotypeScore=94.3158;InbreedingCoeff=0.0090;MQ=53.35;MQ0=20;MQRankSum=2.502;QD=0.74;ReadPosRankSum=0.737;VQSLOD=1.1106;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,3:28:11.90:134,12,0	0/0:6,0:6:8.51:0,9,92	./.	./.	0/0:16,0:16:16.24:0,16,195	0/0:17,0:17:1.01:0,1,199	0/0:33,0:30:39.47:0,39,569	0/0:22,0:22:15.76:0,16,100	0/1:28,2:30:33:33,0,344	0/1:22,0:22:9.99:10,0,299	0/0:18,0:18:16.61:0,17,378	0/0:28,0:28:39.92:0,40,479	0/0:22,0:22:4.46:0,4,419	0/0:22,0:22:11.45:0,11,461	0/0:28,0:28:53.73:0,54,657	0/0:7,0:20:2.99:0,3,29	0/0:31,0:31:47.24:0,47,631	0/0:8,0:16:3.85:0,4,22	0/0:21,0:20:15.82:0,16,150	0/0:23,0:22:28.09:0,28,384	0/1:41,2:39:47.92:48,0,573	0/1:21,0:21:4.82:5,0,263	0/1:23,1:24:18.19:18,0,225	0/0:36,0:36:6.18:0,6,654	0/0:20,5:25:32.71:0,33,448	0/0:27,0:26:18.56:0,19,132	0/1:20,2:21:19.66:20,0,355	0/0:6,0:6:2.97:0,3,20
chr10	99015679	.	GCTGA	G	2527.26	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.611;DP=643;FS=3.516;HRun=0;HaplotypeScore=103.9774;InbreedingCoeff=0.9988;MQ=66.53;MQ0=0;MQRankSum=-4.694;QD=50.55;ReadPosRankSum=-0.366;VQSLOD=4.3722;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,102,2582	0/0:8,0:8:24.08:0,24,657	0/0:22,0:19:29.35:0,29,1073	0/0:19,0:18:51.17:0,51,1186	0/0:27,0:27:72.25:0,72,1952	0/0:24,0:24:72.25:0,72,1925	0/0:31,0:31:93.32:0,93,2538	1/1:1,12:14:36.12:696,36,0	0/0:32,0:32:93.32:0,93,2506	0/0:21,0:21:60.19:0,60,1453	0/0:17,0:17:39.09:0,39,842	0/0:21,0:21:63.22:0,63,1693	0/0:14,0:14:36.12:0,36,957	0/0:22,0:22:66.23:0,66,1741	0/0:32,0:32:96.33:0,96,2548	0/0:27,0:27:81.28:0,81,2173	0/0:28,0:28:81.25:0,81,2213	0/0:27,0:27:75.26:0,75,2027	0/0:24,0:24:57.20:0,57,1524	0/0:23,0:23:63.19:0,63,1532	0/0:38,0:38:99:0,108,2655	0/0:24,0:24:60.19:0,60,1586	0/0:13,0:13:33.10:0,33,812	0/0:16,0:16:48.16:0,48,1297	0/0:15,0:15:42.06:0,42,906	1/1:0,21:21:60.21:1160,60,0	0/0:28,0:28:84.27:0,84,2213	1/1:0,15:15:42.14:814,42,0
chr10	99016096	.	AGCAGGCAGGCAG	A	906.34	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.092;DP=439;FS=0.000;HRun=0;HaplotypeScore=140.7621;InbreedingCoeff=0.6290;MQ=60.16;MQ0=6;MQRankSum=-3.061;QD=16.18;ReadPosRankSum=-1.561;VQSLOD=1.9330;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:15:9.03:0,9,231	0/0:3,0:3:6:0,6,51	0/0:14,0:10:5.74:0,6,31	0/0:10,0:6:3.01:0,3,72	0/0:5,0:5:3.01:0,3,176	0/0:21,0:22:27.06:0,27,826	0/0:19,0:19:33.10:0,33,1404	1/1:6,0:6:5.98:49,6,0	0/0:18,0:18:39.12:0,39,1819	0/0:10,0:10:5.91:0,6,192	0/0:5,0:5:3.01:0,3,117	0/0:21,0:21:36.11:0,36,1828	0/0:13,0:13:24.04:0,24,773	0/0:5,0:5:8.97:0,9,71	0/0:13,0:13:18.03:0,18,751	1/1:8,9:17:6.02:208,6,0	0/0:32,0:32:63.11:0,63,2734	0/0:10,0:25:42.08:0,42,923	0/0:10,0:8:12.04:0,12,665	0/0:9,0:9:12.04:0,12,642	0/0:51,0:51:72.16:0,72,3438	0/0:7,0:7:9.03:0,9,521	0/0:15,0:15:9.02:0,9,315	0/0:34,0:34:69.19:0,69,3122	0/0:6,0:6:3.01:0,3,176	1/1:13,8:21:24.06:560,24,0	0/0:21,0:21:36.10:0,36,1695	1/1:8,4:12:9:228,9,0
chr10	99016844	.	G	GTATC	3844.84	PASS	AC=14;AF=0.269;AN=52;BaseQRankSum=-5.703;DP=479;FS=15.535;HRun=0;HaplotypeScore=73.9237;InbreedingCoeff=0.9577;MQ=65.28;MQ0=4;MQRankSum=-1.065;QD=24.49;ReadPosRankSum=-2.703;VQSLOD=1.4464;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:14.05:192,14,0	0/0:3,0:3:9.03:0,9,142	./.	./.	0/0:17,0:17:24.04:0,24,352	1/1:12,16:29:39.13:930,39,0	0/0:14,0:15:21.06:0,21,311	1/1:38,5:46:39.08:704,39,0	0/0:13,0:13:27.08:0,27,405	0/0:19,0:19:39.13:0,39,603	0/0:8,0:8:9.03:0,9,142	0/0:20,0:20:27.06:0,27,378	0/0:10,0:10:15.01:0,15,188	0/0:10,0:11:21.05:0,21,283	0/0:18,0:18:39.12:0,39,595	1/1:5,0:15:21.07:365,21,0	0/0:21,0:22:42.11:0,42,591	1/1:7,9:17:21.07:501,21,0	0/0:13,0:13:18.05:0,18,262	0/0:27,0:27:57.15:0,57,836	0/0:16,0:16:30.06:0,30,406	0/0:15,0:15:33.09:0,33,479	0/0:19,0:19:42.14:0,42,663	0/0:7,0:7:12.04:0,12,190	0/0:15,0:15:30.10:0,30,475	1/1:6,4:10:15.02:295,15,0	0/0:27,0:27:54.17:0,54,831	1/1:7,12:19:36.12:858,36,0
chr10	99107238	.	T	TC	1306.48	PASS	AC=38;AF=0.950;AN=40;BaseQRankSum=-1.636;DP=505;FS=4.102;HRun=3;HaplotypeScore=14.5434;InbreedingCoeff=0.0778;MQ=26.82;MQ0=14;MQRankSum=-1.733;QD=3.34;ReadPosRankSum=-1.540;VQSLOD=-0.4583;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:5:2.97:20,3,0	1/1:0,9:2:6.02:84,6,0	./.	0/0:2,0:2:2.92:0,3,17	1/1:1,22:2:3.01:42,3,0	1/1:1,19:2:3.01:42,3,0	1/1:0,17:1:3.01:42,3,0	./.	1/1:2,16:7:12.04:168,12,0	1/1:3,22:2:6.02:84,6,0	./.	1/1:6,31:4:3.01:42,3,0	1/1:4,25:7:6.02:83,6,0	1/1:5,28:6:8.94:82,9,0	1/1:1,24:3:6.02:84,6,0	./.	1/1:2,4:3:3.01:41,3,0	./.	1/1:5,10:5:3.01:42,3,0	1/1:2,23:3:6.02:84,6,0	1/1:1,6:3:6.02:84,6,0	1/1:2,24:3:6.02:84,6,0	./.	./.	1/1:3,21:2:6.02:84,6,0	1/1:5,13:3:9.03:124,9,0	./.	1/1:1,11:2:6.02:77,6,0
chr10	99108012	.	CTG	C	1123.61	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.135;DP=723;FS=4.493;HRun=0;HaplotypeScore=101.0370;InbreedingCoeff=0.9994;MQ=74.98;MQ0=0;MQRankSum=1.042;QD=35.11;ReadPosRankSum=0.870;VQSLOD=5.9480;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:87.29:1218,87,0	0/0:12,0:12:33.11:0,33,593	0/0:16,0:16:42.14:0,42,727	0/0:14,0:14:35.57:0,36,660	0/0:16,0:16:39.13:0,39,695	0/0:15,0:15:45.15:0,45,810	0/0:34,0:34:96.33:0,96,1722	0/0:24,0:24:57.20:0,57,1024	0/0:22,0:22:63.22:0,63,1124	0/0:26,0:26:75.26:0,75,1335	0/0:18,0:18:48.16:0,48,857	0/0:36,0:36:99:0,102,1823	0/0:27,0:27:72.25:0,72,1289	0/0:29,0:29:84.29:0,84,1499	0/0:36,0:36:99:0,105,1861	0/0:37,0:37:99:0,111,1994	0/0:29,0:28:87.30:0,87,1555	0/0:40,0:40:99:0,114,2026	0/0:19,0:19:51.17:0,51,916	0/0:17,0:17:48.16:0,48,861	0/0:65,0:65:99:0,187,3288	0/0:21,0:21:63.22:0,63,1127	0/0:18,0:18:48.16:0,48,863	0/0:40,0:40:99:0,117,2076	0/0:15,0:15:39.11:0,39,666	0/0:25,0:25:72.23:0,72,1267	0/0:25,0:24:72.25:0,72,1297	0/0:15,0:15:45.14:0,45,779
chr10	99108215	.	C	CT	4103.05	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-8.140;DP=723;FS=1.358;HRun=1;HaplotypeScore=103.5570;InbreedingCoeff=0.9995;MQ=83.35;MQ0=0;MQRankSum=-4.692;QD=41.44;ReadPosRankSum=-2.146;VQSLOD=2.9675;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:69.22:0,69,895	0/0:12,0:12:36.12:0,36,467	0/0:24,0:24:66.19:0,66,830	0/0:32,0:32:86.49:0,86,1086	0/0:18,0:18:33.58:0,34,428	0/0:25,0:25:63.20:0,63,817	0/0:35,0:35:87.28:0,87,1129	1/1:3,33:36:96.32:1432,96,0	0/0:32,0:32:93.30:0,93,1207	0/0:29,0:29:84.20:0,84,1053	0/0:12,0:12:33.11:0,33,428	0/0:33,0:33:90.28:0,90,1151	0/0:27,0:27:72.23:0,72,934	0/0:25,0:25:69.22:0,69,895	0/0:33,0:32:90.29:0,90,1167	0/0:35,0:35:99:0,99,1282	0/0:26,0:26:72.16:0,72,887	1/1:1,29:30:81.27:1214,81,0	0/0:26,0:26:72.16:0,72,894	0/0:18,0:18:51.17:0,51,662	0/0:39,0:39:99:0,108,1388	0/0:11,0:11:27.09:0,27,350	0/0:19,0:19:48.16:0,48,623	0/0:26,0:26:54.18:0,54,700	0/0:26,0:26:75.24:0,75,974	1/1:3,16:19:57.15:829,57,0	0/0:28,0:27:75.24:0,75,973	1/1:0,14:14:42.14:629,42,0
chr10	99108288	.	G	GT	2168.31	PASS	AB=0.840;AC=40;AF=0.714;AN=56;BaseQRankSum=7.121;DP=415;FS=3.363;HRun=3;HaplotypeScore=239.8778;InbreedingCoeff=0.5800;MQ=39.92;MQ0=0;MQRankSum=-3.357;QD=6.84;ReadPosRankSum=2.640;VQSLOD=0.7921;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:28.37:0,28,269	1/1:4,6:10:18.08:92,18,0	0/1:6,1:5:1.03:1,0,18	0/0:9,0:8:15.70:0,16,144	1/1:3,21:25:54.67:242,55,0	1/1:4,11:15:23.78:144,24,0	1/1:8,2:10:11.50:42,11,0	0/0:19,0:19:30.53:0,31,251	0/1:7,4:11:14.66:36,0,15	1/1:7,18:25:20.71:296,21,0	1/1:5,10:15:15.73:119,16,0	1/1:8,10:18:3.87:131,4,0	1/1:5,7:12:18.89:115,19,0	1/1:3,6:9:14.02:66,14,0	1/1:10,10:20:5.32:110,5,0	0/1:17,0:17:43.70:44,0,129	1/1:4,3:7:5.60:26,6,0	0/0:11,0:11:26.15:0,26,148	0/1:6,3:9:28.68:29,0,46	1/1:7,14:21:32.48:181,32,0	1/1:7,3:10:7.36:30,7,0	1/1:7,11:18:22.98:130,23,0	1/1:5,10:15:14.07:92,14,0	1/1:4,8:12:2.50:64,3,0	1/1:5,14:19:48.79:242,49,0	0/0:30,0:30:67.09:0,67,393	1/1:2,10:12:16.23:129,16,0	0/0:4,0:4:11.75:0,12,72
chr10	99108289	.	G	GT	1835.10	PASS	AB=0.742;AC=37;AF=0.661;AN=56;BaseQRankSum=9.648;DP=410;FS=2.028;HRun=0;HaplotypeScore=240.8122;InbreedingCoeff=0.5517;MQ=39.92;MQ0=0;MQRankSum=-5.180;QD=6.12;ReadPosRankSum=5.548;VQSLOD=2.9830;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:52.84:0,53,335	1/1:4,6:10:4.49:53,4,0	0/0:7,0:5:13.05:0,13,59	0/1:10,0:9:2.30:2,0,129	1/1:4,21:25:53.95:238,54,0	1/1:4,11:15:21.91:140,22,0	1/1:8,2:10:9.79:37,10,0	0/0:19,0:19:54.65:0,55,323	0/1:7,4:11:0.63:38,0,1	0/1:7,18:25:24.51:216,0,25	1/1:5,10:15:12.43:94,12,0	0/1:8,10:18:13.39:101,0,13	1/1:5,6:11:4.62:72,5,0	1/1:3,6:9:13.97:66,14,0	1/1:10,10:20:2.60:107,3,0	0/0:14,0:14:23.51:0,24,161	1/1:4,3:7:5.60:26,6,0	0/0:11,0:11:26.48:0,26,163	0/1:6,3:9:28.18:28,0,54	1/1:7,14:21:32.20:186,32,0	1/1:6,3:9:6.94:28,7,0	1/1:6,11:17:20.32:124,20,0	1/1:5,10:15:12.38:89,12,0	1/1:4,8:12:16.81:79,17,0	1/1:5,14:19:31.89:178,32,0	0/0:30,0:30:79.48:0,79,465	1/1:2,10:12:14.35:126,14,0	0/0:4,0:4:11.86:0,12,78
chr10	99108436	.	GT	G	8094.33	PASS	AC=52;AF=1.000;AN=52;DP=338;FS=0.000;HRun=4;HaplotypeScore=281.6395;InbreedingCoeff=-0.0085;MQ=32.03;MQ0=0;QD=24.02;VQSLOD=2.3945;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,7:9:8.98:78,9,0	1/1:0,5:5:15.02:147,15,0	./.	./.	1/1:1,28:29:65.92:578,66,0	1/1:1,15:16:42.05:403,42,0	1/1:1,11:12:27:239,27,0	1/1:1,19:20:57.16:645,57,0	1/1:0,4:4:12.01:111,12,0	1/1:3,22:25:66.19:745,66,0	1/1:0,8:8:17.98:156,18,0	1/1:0,13:13:33.02:300,33,0	1/1:0,17:17:48.01:440,48,0	1/1:1,6:7:17.99:157,18,0	1/1:2,12:14:33.02:301,33,0	1/1:1,14:15:42.06:406,42,0	1/1:0,8:8:24:211,24,0	1/1:1,3:4:9.02:96,9,0	1/1:0,11:11:30.07:323,30,0	1/1:3,12:15:30.03:292,30,0	1/1:0,7:7:11.66:104,12,0	1/1:0,14:14:39.01:359,39,0	1/1:2,11:13:26.99:254,27,0	1/1:2,8:10:20.99:183,21,0	1/1:1,17:18:48.05:459,48,0	1/1:1,18:19:54.13:583,54,0	1/1:3,12:15:33.03:313,33,0	1/1:2,7:9:21.04:213,21,0
chr10	99108443	.	C	CT	11871.12	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=0.890;DP=361;FS=10.598;HRun=1;HaplotypeScore=265.8106;InbreedingCoeff=0.7690;MQ=37.32;MQ0=0;MQRankSum=-2.442;QD=33.16;ReadPosRankSum=2.344;VQSLOD=2.3754;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:21.02:252,21,0	1/1:0,6:6:18.06:226,18,0	0/0:3,0:3:5.03:0,5,46	./.	1/1:6,26:32:69.19:784,69,0	1/1:3,14:17:39.12:465,39,0	1/1:3,11:14:36.11:440,36,0	1/1:2,22:24:72.20:971,72,0	1/1:3,5:8:15.01:162,15,0	1/1:2,20:22:63.21:858,63,0	1/1:0,9:9:24.07:288,24,0	1/1:2,12:14:42.04:467,42,0	1/1:1,17:18:51.15:605,51,0	1/1:0,7:7:21.06:246,21,0	1/1:1,14:15:42.13:515,42,0	1/1:1,14:15:39.12:469,39,0	1/1:1,10:11:27.08:316,27,0	1/1:0,3:3:9.03:119,9,0	1/1:3,9:12:33.11:433,33,0	1/1:0,13:13:33.07:387,33,0	1/1:1,8:9:24.07:295,24,0	1/1:0,15:15:45.13:541,45,0	1/1:2,10:12:30.08:347,30,0	1/1:0,9:9:24.07:279,24,0	1/1:1,19:20:57.18:710,57,0	1/1:1,24:25:72.24:971,72,0	1/1:1,12:13:39.08:462,39,0	1/1:0,7:7:21.07:265,21,0
chr10	99111414	.	TGAATGTGTCGTAGGCA	T	4612.48	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=9.931;DP=832;FS=2.088;HRun=0;HaplotypeScore=365.7673;InbreedingCoeff=1.0000;MQ=83.07;MQ0=0;MQRankSum=-6.387;QD=92.25;ReadPosRankSum=-0.333;VQSLOD=3.7985;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,151,10237	0/0:16,0:16:48.16:0,48,3624	0/0:26,0:26:75.26:0,75,4161	0/0:27,0:26:75.25:0,75,4088	0/0:33,0:33:84.17:0,84,5842	0/0:29,0:29:78.27:0,78,5801	0/0:32,0:32:90.31:0,90,5945	1/1:8,19:27:57.18:2226,57,0	0/0:30,0:30:87.30:0,87,6349	0/0:35,0:35:99:0,105,7024	0/0:23,0:23:57.20:0,57,4186	0/0:35,0:35:99:0,105,7974	0/0:36,0:36:99:0,105,7179	0/0:28,0:28:84.29:0,84,6163	0/0:30,0:30:87.30:0,87,6265	0/0:36,0:36:99:0,108,7688	0/0:43,0:43:99:0,126,9280	0/0:18,0:18:54.19:0,54,4018	0/0:32,0:32:93.32:0,93,5804	0/0:36,0:36:99:0,108,7237	0/0:50,0:50:99:0,151,10509	0/0:23,0:23:54.19:0,54,4000	0/0:25,0:25:60.21:0,60,4516	0/0:39,0:39:99:0,114,7756	0/0:24,0:24:63.22:0,63,4221	1/1:5,18:23:54.18:2386,54,0	0/0:24,0:24:66.23:0,66,4340	./.
chr10	99112127	.	GCCC	G	2427.23	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.201;DP=350;FS=15.363;HRun=11;HaplotypeScore=61.9851;InbreedingCoeff=0.9009;MQ=76.46;MQ0=1;MQRankSum=-3.536;QD=24.77;ReadPosRankSum=3.534;VQSLOD=0.7201;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,22:29:30.56:426,31,0	0/0:7,0:8:18.04:0,18,292	0/0:17,0:13:20.48:0,20,340	0/0:13,0:12:15.05:0,15,249	0/0:9,0:8:9.90:0,10,131	0/0:9,0:9:18.02:0,18,238	0/0:22,0:25:57.11:0,57,936	1/1:2,24:26:65.91:828,66,0	0/0:5,0:5:15.04:0,15,265	0/0:4,0:4:9.02:0,9,109	0/0:4,0:6:6:0,6,84	0/0:9,0:12:24.02:0,24,341	0/0:6,0:8:12:0,12,123	0/0:15,0:15:29.31:0,29,430	0/0:11,0:12:21.06:0,21,346	0/0:7,0:7:18.02:0,18,307	0/0:15,0:17:33.07:0,33,567	1/1:2,14:16:35.92:448,36,0	0/0:10,0:10:23.99:0,24,328	0/0:9,0:9:15.02:0,15,222	0/0:24,0:25:39.12:0,39,702	0/0:3,0:3:9.03:0,9,149	0/0:7,0:9:18.48:0,18,254	0/0:8,0:11:24.02:0,24,372	0/0:7,0:7:12.03:0,12,206	1/1:2,18:20:54.04:701,54,0	0/0:8,0:9:18.04:0,18,294	1/1:2,5:7:14.94:197,15,0
chr10	99117304	.	CT	C	915.66	PASS	AB=0.914;AC=12;AF=0.214;AN=56;BaseQRankSum=8.238;DP=767;FS=0.910;HRun=13;HaplotypeScore=82.6533;InbreedingCoeff=0.5578;MQ=69.41;MQ0=0;MQRankSum=-0.077;QD=5.55;ReadPosRankSum=1.923;VQSLOD=2.5263;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,5:49:29.90:0,30,888	0/0:11,0:11:21.02:0,21,199	0/1:10,0:10:13.06:17,0,13	0/1:17,0:14:9.43:9,0,15	0/0:23,0:23:45.04:0,45,423	0/0:28,1:29:50.15:0,50,626	0/0:22,2:26:15.25:0,15,453	1/1:14,11:27:34.76:245,35,0	0/0:29,2:31:53.05:0,53,617	0/0:33,1:34:41.55:0,42,544	0/0:20,0:20:17.14:0,17,325	0/0:27,1:28:41.09:0,41,515	0/0:31,2:33:67.99:0,68,734	0/0:29,1:34:31.76:0,32,412	0/0:37,1:39:89.01:0,89,962	0/0:36,4:41:55.09:0,55,790	0/0:27,0:27:63.08:0,63,602	1/1:3,18:21:47.71:350,48,0	0/1:19,3:22:1.72:2,0,298	0/0:22,1:24:32.39:0,32,429	0/0:32,0:32:74.85:0,75,665	0/0:24,1:27:40.85:0,41,523	0/1:26,5:31:43.54:44,0,407	0/0:25,2:28:53.17:0,53,659	0/0:28,0:28:62.92:0,63,572	1/1:10,17:28:0.60:279,1,0	0/0:36,1:36:56.58:0,57,659	1/1:2,6:8:17.86:131,18,0
chr10	99118768	.	AAAAAAACC	A	1159.78	PASS	AB=0.909;AC=7;AF=0.125;AN=56;BaseQRankSum=4.571;DP=578;FS=0.647;HRun=0;HaplotypeScore=132.5814;InbreedingCoeff=0.5115;MQ=44.77;MQ0=29;MQRankSum=1.228;QD=10.00;ReadPosRankSum=-0.085;VQSLOD=2.6321;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:27:33.18:33,0,91	0/0:6,0:4:9.03:0,9,189	0/0:22,0:5:13.76:0,14,117	0/1:20,0:4:3.72:4,0,116	0/0:34,0:33:80.52:0,81,1729	0/0:18,0:17:48.12:0,48,1208	0/0:18,0:17:41.98:0,42,824	1/1:10,18:23:43.61:539,44,0	0/0:20,0:20:50.38:0,50,1182	0/0:21,0:21:51.55:0,52,1227	0/0:17,0:17:30.10:0,30,805	0/0:14,0:14:33.06:0,33,765	0/0:9,0:9:24.08:0,24,548	0/0:17,0:16:43.91:0,44,1164	0/0:29,0:27:63.16:0,63,1383	0/0:18,0:17:48.08:0,48,1326	0/0:44,0:44:99:0,108,2440	0/0:23,0:20:25.80:0,26,320	0/0:22,0:20:54.12:0,54,1030	0/0:20,0:19:48.16:0,48,957	0/0:17,0:15:30.10:0,30,769	0/0:17,0:17:39.08:0,39,1112	0/0:15,0:15:30.09:0,30,705	0/0:24,0:22:39.12:0,39,1086	0/0:19,0:18:45.15:0,45,1267	1/1:7,14:21:3.02:471,3,0	0/0:18,0:17:31.35:0,31,717	0/1:10,6:10:4.18:241,0,4
chr10	99118770	.	AAAAACC	A	1039.12	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=5.351;DP=570;FS=1.317;HRun=0;HaplotypeScore=114.0214;InbreedingCoeff=0.6602;MQ=45.70;MQ0=25;MQRankSum=1.145;QD=9.90;ReadPosRankSum=-0.640;VQSLOD=1.8357;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,16:26:2.28:123,2,0	0/0:5,0:3:9.03:0,9,159	0/0:22,0:5:13.55:0,14,103	0/1:20,0:4:10.36:10,0,114	0/0:35,0:34:74.40:0,74,1292	0/0:19,0:18:42.03:0,42,859	0/0:17,0:16:38.86:0,39,598	1/1:26,0:21:41.71:442,42,0	0/0:20,0:20:48.97:0,49,895	0/0:21,0:21:44.95:0,45,836	0/0:17,0:17:30.03:0,30,598	0/0:14,0:14:27.09:0,27,586	0/0:10,0:10:26.95:0,27,449	0/0:17,0:16:40.01:0,40,884	0/0:28,0:26:57.03:0,57,982	0/0:17,0:16:27.08:0,27,956	0/0:45,0:45:95.07:0,95,1867	0/0:25,0:23:1.35:0,1,91	0/0:23,0:21:59.01:0,59,813	0/0:19,0:19:48.02:0,48,749	0/0:16,0:14:30.03:0,30,548	0/0:17,0:17:36.12:0,36,844	0/0:16,0:16:25.52:0,26,609	0/0:24,0:22:36.05:0,36,772	0/0:20,0:19:48.16:0,48,1037	0/1:17,0:17:0.44:421,0,0	0/0:18,0:17:30.46:0,30,504	1/1:13,0:8:11.95:181,12,0
chr10	99118773	.	AACC	A	1024.03	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=4.386;DP=555;FS=1.900;HRun=0;HaplotypeScore=87.3213;InbreedingCoeff=0.7686;MQ=48.15;MQ0=20;MQRankSum=-2.184;QD=8.53;ReadPosRankSum=-2.498;VQSLOD=2.5768;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:19:4.22:66,4,0	0/0:5,0:3:9.03:0,9,120	0/0:24,0:6:10.65:0,11,78	0/1:22,0:5:8.04:8,0,110	0/0:34,0:33:58.15:0,58,786	0/0:16,0:15:35.88:0,36,472	0/0:15,0:14:8.47:0,8,270	1/1:26,0:21:24.45:350,24,0	0/0:20,0:20:37.65:0,38,526	0/0:16,0:16:29.67:0,30,409	0/0:17,0:17:25.87:0,26,343	0/0:13,0:13:25.72:0,26,346	0/0:12,0:12:27.01:0,27,382	0/0:17,0:17:32.43:0,32,477	0/0:25,0:24:1.17:0,1,412	0/0:16,0:16:43.55:0,44,550	0/0:46,0:46:57.51:0,58,1141	1/1:5,18:22:20.99:239,21,0	0/0:25,0:23:17.13:0,17,553	0/0:20,0:20:32.31:0,32,431	0/0:17,0:15:20.30:0,20,288	0/0:16,0:16:35.70:0,36,456	0/0:15,0:15:9.62:0,10,375	0/0:24,0:22:31.86:0,32,431	0/0:21,0:20:47.81:0,48,693	1/1:17,0:17:27.95:418,28,0	0/0:20,0:19:22.20:0,22,319	1/1:10,0:7:12.01:110,12,0
chr10	99119058	.	C	CGAAATGACTTA	13545.93	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-6.329;DP=599;FS=14.103;HRun=0;HaplotypeScore=177.3616;InbreedingCoeff=0.9888;MQ=74.88;MQ0=0;MQRankSum=-12.096;QD=108.37;ReadPosRankSum=-1.388;VQSLOD=4.0772;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,12:25:48.16:2573,48,0	0/0:6,0:5:12.04:0,12,428	0/0:12,0:12:30.04:0,30,813	0/0:16,0:16:15.19:0,15,822	0/0:25,0:25:57.19:0,57,1832	0/0:22,0:22:63.20:0,63,2085	0/0:29,0:29:84.23:0,84,2428	1/1:16,4:36:99:4751,105,0	0/0:18,0:18:54.15:0,54,1840	0/0:30,0:30:84.25:0,84,2655	0/0:12,0:12:30.10:0,30,1069	0/0:15,0:15:42.13:0,42,1417	0/0:27,0:27:78.27:0,78,2726	0/0:16,0:16:42.11:0,42,1334	0/0:18,0:18:54.15:0,54,1761	0/0:21,0:21:63.22:0,63,2174	0/0:31,0:31:87.30:0,87,2919	1/1:6,10:24:42.14:2218,42,0	0/0:17,0:17:48.16:0,48,1539	0/0:21,0:21:63.20:0,63,2087	0/0:25,0:26:72.10:0,72,2126	0/0:15,0:15:35.98:0,36,1202	0/0:25,0:25:69.24:0,69,2377	0/0:17,0:17:48.12:0,48,1465	0/0:28,0:28:81.26:0,81,2717	1/1:4,13:24:57.20:2839,57,0	0/0:27,0:27:78.27:0,78,2625	1/1:6,3:16:27.09:1164,27,0
chr10	99120438	.	A	AT	567.60	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.461;DP=732;FS=3.168;HRun=6;HaplotypeScore=68.9646;InbreedingCoeff=0.9998;MQ=75.33;MQ0=0;MQRankSum=-3.324;QD=24.68;ReadPosRankSum=0.527;VQSLOD=3.4906;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,102,1032	0/0:15,0:15:39.09:0,39,398	0/0:16,0:15:40.42:0,40,372	0/0:16,0:16:42.05:0,42,415	0/0:26,0:27:74.20:0,74,739	0/0:27,0:27:78.18:0,78,796	0/0:26,0:26:75.17:0,75,765	0/0:34,0:34:84.18:0,84,851	0/0:32,0:32:90.19:0,90,912	0/0:33,0:33:99:0,99,1006	0/0:23,0:23:66.15:0,66,673	0/0:35,0:35:99:0,102,1033	0/0:24,0:24:72.16:0,72,735	0/0:24,0:24:66.15:0,66,673	0/0:26,0:26:75.17:0,75,765	0/0:26,0:26:78.18:0,78,795	0/0:27,0:27:69.15:0,69,704	1/1:4,19:23:54.14:662,54,0	0/0:21,0:21:54.11:0,54,546	0/0:41,0:41:99:0,114,1156	0/0:18,0:18:54.12:0,54,551	0/0:28,0:28:81.16:0,81,813	0/0:31,0:31:87.19:0,87,882	0/0:17,0:17:48.11:0,48,490	0/0:32,0:32:93.16:0,93,928	0/0:26,0:26:72.14:0,72,724	0/0:23,0:22:63.12:0,63,635	0/0:21,0:21:63.14:0,63,643
chr10	99123902	.	T	TACACAC	3501.63	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=1.499;DP=626;FS=4.115;HRun=0;HaplotypeScore=155.5373;InbreedingCoeff=0.3425;MQ=67.12;MQ0=18;MQRankSum=-7.531;QD=13.95;ReadPosRankSum=-3.408;VQSLOD=2.2200;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:5.52:27,6,0	0/0:5,0:4:12.04:0,12,254	0/0:41,0:23:57.62:0,58,1058	0/0:59,0:24:50.76:0,51,861	0/0:17,0:17:24.49:0,24,657	0/0:19,0:17:23.12:0,23,534	0/1:25,0:24:14.08:14,0,767	1/1:11,25:38:99:2006,101,0	0/0:19,0:18:23.57:0,24,420	0/0:22,0:22:17.12:0,17,774	0/0:13,0:13:10.29:0,10,526	0/1:16,0:16:46.04:46,0,438	0/1:14,0:14:14.75:15,0,432	0/1:23,0:23:6.86:7,0,673	0/0:33,0:33:8.09:0,8,1088	0/0:24,0:24:66.22:0,66,1390	0/1:16,0:16:14.40:14,0,448	1/1:11,0:12:21.03:402,21,0	0/1:17,0:14:25.62:26,0,707	0/0:20,0:20:36.45:0,36,781	0/0:27,0:26:4.95:0,5,645	0/0:14,0:14:20.38:0,20,541	0/0:22,0:21:38.72:0,39,880	0/0:25,0:25:18:0,18,700	0/0:13,0:14:13.77:0,14,502	1/1:3,13:15:33.58:780,34,0	0/1:28,0:28:21.44:21,0,810	1/1:3,10:16:6.02:144,6,0
chr10	99123905	.	A	ACACACTCTCTCT	8950.35	PASS	AB=0.944;AC=26;AF=0.464;AN=56;BaseQRankSum=8.949;DP=793;FS=20.316;HRun=0;HaplotypeScore=288.5387;InbreedingCoeff=-0.2890;MQ=58.21;MQ0=22;MQRankSum=-10.405;QD=15.30;ReadPosRankSum=-5.767;VQSLOD=1.6681;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,17:45:9.95:39,0,10	0/1:8,0:7:99:108,0,180	0/0:40,0:21:45.40:0,45,859	0/0:61,0:22:38.80:0,39,738	0/1:24,0:24:46.10:46,0,454	0/1:27,0:25:98.17:98,0,358	0/1:34,0:33:99:349,0,520	1/1:45,0:43:99:2226,120,0	0/0:22,0:21:18.66:0,19,245	0/1:25,0:24:99:649,0,526	0/1:21,0:20:40.31:40,0,362	0/1:19,0:21:99:325,0,300	0/1:20,0:20:99:427,0,299	0/1:25,0:28:99:342,0,500	0/1:43,0:54:99:184,0,767	0/0:20,0:24:69.22:0,69,1920	0/1:22,0:22:99:667,0,290	1/1:12,0:12:27.01:536,27,0	0/1:20,0:17:99:246,0,520	0/0:25,0:27:32.61:0,33,566	0/1:29,0:28:99:137,0,440	0/1:22,0:22:54.81:55,0,379	0/0:33,0:32:38.31:0,38,620	0/1:28,0:27:74.22:74,0,455	0/1:25,0:24:99:111,0,320	1/1:24,0:21:52.73:1367,53,0	0/1:24,0:33:99:691,0,548	1/1:17,0:17:14.24:231,14,0
chr10	99126635	.	T	TG	3930.69	PASS	AB=0.694;AC=30;AF=0.536;AN=56;BaseQRankSum=-6.620;DP=419;FS=9.244;HRun=10;HaplotypeScore=56.1032;InbreedingCoeff=-0.1716;MQ=70.96;MQ0=0;MQRankSum=-2.392;QD=10.98;ReadPosRankSum=-2.230;VQSLOD=1.5314;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:32,2:34:41.91:292,0,42	0/1:2,4:6:15.29:55,0,15	0/0:9,0:9:2.89:0,3,21	0/0:9,0:8:5.69:0,6,35	1/1:8,5:14:23.20:266,23,0	0/1:6,10:16:46.86:164,0,47	1/1:10,20:32:47.75:538,48,0	0/0:8,0:16:13.69:0,14,39	0/1:5,9:14:28.20:139,0,28	1/1:5,4:9:12.02:122,12,0	0/1:6,6:12:15.62:55,0,16	1/1:9,7:16:2.41:218,2,0	1/1:2,7:9:12.33:128,12,0	1/1:12,6:18:27.74:244,28,0	0/1:8,10:18:43.85:194,0,44	0/1:13,1:14:5.02:5,0,170	0/1:9,13:22:90.97:186,0,91	0/1:5,16:21:31.81:310,0,32	0/1:12,1:15:9.30:114,0,9	0/1:4,2:6:9.63:99,0,10	0/1:12,12:24:53.07:107,0,53	1/1:3,2:5:6.02:64,6,0	0/1:3,1:4:18.63:26,0,19	0/1:5,14:20:13.22:274,0,13	0/1:4,7:11:0.58:200,0,1	0/0:3,0:17:26.47:0,26,76	0/1:6,11:17:71.51:133,0,72	0/0:0,0:10:16.30:0,16,47
chr10	99126645	.	G	GT	704.51	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=5.485;DP=405;FS=18.508;HRun=0;HaplotypeScore=51.9605;InbreedingCoeff=-0.2301;MQ=73.62;MQ0=0;MQRankSum=-1.577;QD=2.52;ReadPosRankSum=5.027;VQSLOD=0.6157;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,24:34:6.32:508,6,0	0/0:7,0:7:1.71:0,2,95	0/0:10,0:10:20.04:0,20,197	0/0:8,0:7:20.36:0,20,197	1/1:11,0:11:2.18:40,2,0	0/1:15,0:15:14.94:15,0,147	0/1:28,0:28:61.11:61,0,89	0/0:17,0:17:38.42:0,38,279	0/1:16,0:17:21.90:22,0,128	0/0:8,0:8:1.78:0,2,64	0/1:11,0:11:6.87:7,0,101	0/0:20,0:21:4.77:0,5,210	0/1:9,0:9:12.37:12,0,33	0/1:13,0:14:2.26:2,0,77	0/1:18,0:18:7.03:7,0,213	0/0:13,0:13:26.84:0,27,354	0/1:22,0:21:29.84:30,0,207	0/1:21,0:21:28.51:29,0,154	0/0:15,0:15:9.42:0,9,186	0/1:5,0:5:6.12:6,0,34	0/1:21,0:21:0.73:1,0,164	0/1:4,0:4:2.20:9,0,2	0/1:2,0:2:1.78:2,0,36	0/1:21,0:21:51.06:51,0,119	0/1:9,0:9:32.92:33,0,44	0/0:15,0:15:43.97:0,44,270	0/1:18,0:18:18.10:18,0,249	0/0:11,0:11:26.39:0,26,158
chr10	99126921	.	TGG	T	1211.86	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=0.892;DP=523;FS=0.000;HRun=10;HaplotypeScore=78.2222;InbreedingCoeff=0.9437;MQ=92.04;MQ0=0;MQRankSum=-2.276;QD=22.87;ReadPosRankSum=1.540;VQSLOD=3.2038;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:33:54.77:0,55,189	0/0:6,0:6:9.01:0,9,119	0/0:25,0:25:20.70:0,21,526	0/0:31,0:31:55.55:0,56,640	0/0:13,0:15:26.06:0,26,332	0/0:26,0:26:54.15:0,54,784	0/0:26,0:27:65.68:0,66,953	1/1:3,14:17:42.09:458,42,0	0/0:13,0:13:21.07:0,21,333	0/0:17,0:19:20.47:0,20,217	0/0:8,0:8:12.04:0,12,187	0/0:17,0:17:33.10:0,33,502	0/0:21,0:23:43.71:0,44,597	0/0:16,0:16:32.88:0,33,441	0/0:15,0:15:36.09:0,36,504	0/0:19,0:20:29.27:0,29,431	0/0:30,0:31:59.16:0,59,853	0/0:9,0:18:36.05:0,36,402	0/0:14,0:14:21.02:0,21,280	0/0:10,0:10:20.73:0,21,274	0/0:21,0:21:36.11:0,36,547	0/0:11,0:11:15.03:0,15,194	0/0:14,0:14:24.04:0,24,308	0/0:27,0:28:44.61:0,45,610	0/0:14,0:14:15.04:0,15,218	1/1:8,21:29:66.15:727,66,0	0/0:14,0:14:33.11:0,33,514	1/1:1,6:7:15.04:167,15,0
chr10	99128577	.	C	CA	1617.19	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.879;DP=620;FS=0.527;HRun=8;HaplotypeScore=56.7948;InbreedingCoeff=0.9692;MQ=63.42;MQ0=3;MQRankSum=0.291;QD=23.10;ReadPosRankSum=-3.263;VQSLOD=2.7210;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,150,1360	0/0:13,0:13:9.13:0,9,293	0/0:7,0:6:14.90:0,15,124	0/0:11,0:10:20.78:0,21,170	0/0:26,0:26:60.01:0,60,544	0/0:25,0:25:63.03:0,63,576	0/0:22,0:22:54.01:0,54,490	1/1:9,24:32:75.01:812,75,0	0/0:16,0:16:48.01:0,48,435	0/0:24,0:23:48:0,48,439	0/0:24,0:24:59.69:0,60,528	0/0:24,0:24:54.02:0,54,494	0/0:25,0:25:66.03:0,66,604	0/0:20,0:20:42:0,42,380	0/0:21,0:21:53.98:0,54,484	0/0:23,0:23:66.03:0,66,604	0/0:26,0:26:78.01:0,78,702	0/0:22,0:22:54.01:0,54,494	0/0:14,0:14:27.01:0,27,247	0/0:25,0:25:57.01:0,57,518	0/0:10,0:10:27.01:0,27,247	0/0:21,0:21:51.02:0,51,467	0/0:21,0:20:47.99:0,48,433	0/0:22,0:22:57.01:0,57,517	0/0:27,0:27:72.02:0,72,656	1/1:1,23:24:66.16:739,66,0	0/0:24,0:24:57.01:0,57,516	1/1:1,12:13:18.05:208,18,0
chr10	99131052	.	G	GAA	2745.44	PASS	AB=0.933;AC=9;AF=0.161;AN=56;BaseQRankSum=-5.510;DP=698;FS=7.557;HRun=10;HaplotypeScore=82.9956;InbreedingCoeff=0.8688;MQ=68.59;MQ0=1;MQRankSum=-1.160;QD=24.08;ReadPosRankSum=-2.695;VQSLOD=2.5493;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,19:25:33.11:493,33,0	0/0:13,0:14:41.80:0,42,399	0/0:27,0:19:26.40:0,26,251	0/1:13,1:9:18.73:19,0,107	0/0:37,0:39:77.81:0,78,766	0/0:29,0:29:69.09:0,69,700	0/0:19,0:19:51.07:0,51,518	1/1:6,19:27:59.19:755,59,0	0/0:33,0:34:86.88:0,87,859	0/0:31,0:32:86.90:0,87,852	0/0:23,0:23:53.63:0,54,516	0/0:23,0:23:51.06:0,51,510	0/0:18,0:19:44.81:0,45,439	0/0:19,0:19:48.04:0,48,473	0/0:21,0:21:51.07:0,51,511	0/0:29,0:30:71.82:0,72,705	0/0:21,0:23:59.58:0,60,573	0/0:27,0:27:68.98:0,69,687	0/0:18,0:18:36.04:0,36,358	0/0:28,0:28:72.14:0,72,726	0/0:28,0:28:69.08:0,69,686	0/0:24,0:25:53.82:0,54,525	0/0:23,0:23:61.37:0,61,612	0/0:31,0:31:42.65:0,43,617	0/0:24,0:24:63.10:0,63,632	1/1:7,24:34:86.15:1108,86,0	0/0:27,0:27:69.08:0,69,686	1/1:0,14:14:36.12:537,36,0
chr10	99132157	.	AG	A	521.85	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.658;DP=585;FS=14.756;HRun=10;HaplotypeScore=94.3093;InbreedingCoeff=0.7161;MQ=81.87;MQ0=1;MQRankSum=-1.386;QD=17.40;ReadPosRankSum=4.619;VQSLOD=2.8644;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:24:34.76:0,35,247	0/0:2,0:7:11.72:0,12,75	0/0:24,0:23:26.62:0,27,405	0/0:24,0:24:34.46:0,34,421	0/0:9,0:17:17.23:0,17,91	0/0:6,0:21:17.31:0,17,98	0/0:10,0:22:28.58:0,29,144	0/0:12,0:23:23.14:0,23,133	0/0:6,0:21:28.72:0,29,150	0/0:9,0:21:31.81:0,32,179	0/0:3,0:10:11.43:0,11,58	0/0:14,0:20:26.01:0,26,156	0/0:5,0:20:34.52:0,35,190	0/0:5,0:23:19.95:0,20,100	0/0:4,0:26:34.41:0,34,177	0/0:24,3:28:19.95:0,20,652	0/0:7,0:26:45.78:0,46,240	1/1:2,26:30:62.67:616,63,0	0/0:11,0:23:44.88:0,45,246	0/0:6,0:15:26:0,26,155	0/0:10,0:25:28.65:0,29,154	0/0:6,0:23:37.07:0,37,187	0/0:10,0:24:22.94:0,23,120	0/0:2,0:31:45.86:0,46,231	0/0:4,0:12:5.75:0,6,29	0/0:7,0:20:34.57:0,35,194	0/0:8,0:22:25.80:0,26,135	0/0:1,0:3:2.84:0,3,14
chr10	99132158	.	G	GGG	7032.78	PASS	AB=0.891;AC=46;AF=0.821;AN=56;BaseQRankSum=-7.471;DP=530;FS=4.348;HRun=9;HaplotypeScore=79.5765;InbreedingCoeff=0.7083;MQ=83.87;MQ0=1;MQRankSum=-3.678;QD=16.59;ReadPosRankSum=-3.093;VQSLOD=2.8265;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:43.89:44,0,90	1/1:6,0:6:9.02:106,9,0	0/0:25,0:24:47.49:0,47,436	0/0:23,0:23:43.14:0,43,370	1/1:15,0:15:17.03:186,17,0	1/1:18,0:18:15.05:224,15,0	1/1:20,0:20:29.07:360,29,0	1/1:22,0:22:17.55:223,18,0	1/1:19,0:19:29.38:358,29,0	1/1:18,0:18:33.05:416,33,0	1/1:10,0:10:11.53:139,12,0	0/1:13,4:18:3.55:266,0,4	1/1:17,0:17:28.77:317,29,0	1/1:19,0:19:20.03:223,20,0	1/1:24,0:24:35.16:442,35,0	0/0:28,0:28:26.93:0,27,614	1/1:23,0:23:42.58:485,43,0	0/0:30,0:30:26.63:0,27,252	1/1:20,0:20:43.95:529,44,0	1/1:16,0:16:17.52:229,18,0	1/1:20,0:20:25.55:295,26,0	1/1:20,0:20:38.10:497,38,0	1/1:20,0:20:23.50:293,24,0	1/1:31,0:31:47.65:680,48,0	1/1:9,0:9:6.02:89,6,0	1/1:18,0:18:26.57:336,27,0	1/1:20,0:20:25.55:288,26,0	1/1:2,0:2:2.50:9,2,0
chr10	99133620	.	AT	A	919.59	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.693;DP=523;FS=2.871;HRun=10;HaplotypeScore=59.5107;InbreedingCoeff=0.9585;MQ=64.59;MQ0=20;MQRankSum=-1.175;QD=19.16;ReadPosRankSum=2.345;VQSLOD=4.7199;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:25:68.99:599,69,0	0/0:9,0:9:18.03:0,18,184	0/0:15,1:10:17.98:0,18,159	0/0:10,0:6:14.96:0,15,150	0/0:24,0:23:54.58:0,55,585	0/0:21,0:21:57.04:0,57,606	0/0:14,1:15:13.02:0,13,360	0/0:5,0:19:45.74:0,46,243	0/0:16,0:15:36.09:0,36,390	0/0:21,1:22:31.09:0,31,559	0/0:17,0:17:33.08:0,33,358	0/0:22,1:23:34.01:0,34,579	0/0:14,0:13:30:0,30,325	0/0:16,0:14:36.10:0,36,398	0/0:18,0:16:45.12:0,45,498	0/0:12,0:12:24.06:0,24,266	0/0:17,0:16:42.10:0,42,456	1/1:3,19:20:50.99:442,51,0	0/0:15,0:13:33.04:0,33,344	0/0:28,0:28:72.02:0,72,768	0/0:14,0:13:36.10:0,36,398	0/0:14,0:13:33.07:0,33,355	0/0:21,0:21:48.13:0,48,531	0/0:22,0:22:54.12:0,54,580	0/0:15,1:16:22.06:0,22,463	0/0:13,0:32:68.77:0,69,386	0/0:25,0:24:51.10:0,51,550	0/0:8,0:8:14.36:0,14,82
chr10	99133969	.	A	AT	1508.49	PASS	AB=0.741;AC=6;AF=0.107;AN=56;BaseQRankSum=-10.258;DP=651;FS=3.634;HRun=11;HaplotypeScore=70.6991;InbreedingCoeff=0.6121;MQ=64.82;MQ0=0;MQRankSum=1.745;QD=16.40;ReadPosRankSum=-4.021;VQSLOD=3.1432;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:48:67.20:0,67,194	0/1:7,1:8:9.52:10,0,118	0/0:7,0:6:11.94:0,12,92	0/0:9,0:8:10.50:0,11,69	0/0:18,0:17:44.80:0,45,348	0/0:23,0:23:65.73:0,66,509	0/0:19,0:20:40.87:0,41,308	1/1:5,25:31:70.68:661,71,0	0/0:23,1:24:23.32:0,23,359	0/0:22,0:23:52.80:0,53,401	0/0:18,0:18:44.73:0,45,340	0/0:16,0:16:32.84:0,33,255	0/0:25,0:25:62.75:0,63,487	0/0:23,1:24:33.48:0,33,454	0/0:26,0:26:59.72:0,60,462	0/0:20,0:20:23.91:0,24,322	0/0:35,0:35:73.03:0,73,673	0/0:1,0:19:26.48:0,26,77	0/0:16,0:16:35.41:0,35,266	0/0:41,0:42:99:0,107,826	0/0:18,0:18:34.51:0,35,276	0/0:26,0:26:50.74:0,51,395	0/0:24,0:24:62.70:0,63,481	0/0:18,0:18:50.76:0,51,390	0/0:21,2:24:18.92:0,19,438	0/1:11,24:35:29.06:628,0,29	0/0:36,0:36:85.62:0,86,653	1/1:2,16:18:15.84:342,16,0
chr10	99134109	.	A	AT	1581.20	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.818;DP=663;FS=0.000;HRun=3;HaplotypeScore=76.2995;InbreedingCoeff=0.9837;MQ=83.42;MQ0=0;MQRankSum=-5.110;QD=36.77;ReadPosRankSum=0.821;VQSLOD=3.9902;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:87.29:1298,87,0	0/0:4,0:4:12.04:0,12,154	0/0:19,0:19:54.14:0,54,659	0/0:20,0:20:38.71:0,39,564	0/0:32,0:32:96.30:0,96,1232	0/0:28,0:28:78.25:0,78,1012	0/0:25,0:25:72.23:0,72,932	0/0:28,0:28:78.25:0,78,1013	0/0:28,0:28:81.26:0,81,1052	0/0:31,0:31:90.29:0,90,1159	0/0:24,0:24:69.20:0,69,879	0/0:16,0:16:48.16:0,48,623	0/0:19,0:19:54.17:0,54,689	0/0:21,0:21:60.17:0,60,753	0/0:33,0:33:90.29:0,90,1168	0/0:29,0:29:87.25:0,87,1089	0/0:40,0:40:99:0,120,1557	1/1:1,9:10:27.09:405,27,0	0/0:15,0:15:45.14:0,45,572	0/0:21,0:21:63.20:0,63,818	0/0:28,0:28:81.26:0,81,1052	0/0:24,0:24:69.22:0,69,895	0/0:18,0:18:51.17:0,51,662	0/0:20,0:20:60.19:0,60,777	0/0:19,0:19:54.18:0,54,701	0/0:34,0:34:99:0,102,1324	0/0:32,0:32:96.31:0,96,1246	0/0:12,0:12:36.12:0,36,467
chr10	99134516	.	GA	G	764.08	PASS	AB=0.934;AC=12;AF=0.214;AN=56;BaseQRankSum=4.912;DP=544;FS=5.874;HRun=13;HaplotypeScore=73.6545;InbreedingCoeff=0.2516;MQ=77.42;MQ0=4;MQRankSum=5.272;QD=3.71;ReadPosRankSum=-2.163;VQSLOD=0.4078;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:48.92:0,49,234	0/1:4,2:7:20.42:20,0,85	0/1:36,0:21:17.21:17,0,97	0/1:24,0:12:12.96:13,0,30	0/1:31,1:32:3.49:3,0,519	0/0:19,0:19:16.90:0,17,369	0/0:7,0:8:17.86:0,18,160	1/1:14,17:32:25.43:331,25,0	0/0:18,1:20:4.22:0,4,218	0/0:21,1:22:19.92:0,20,321	0/0:20,0:21:29.05:0,29,430	0/0:11,0:11:5.32:0,5,114	0/0:18,0:18:33.05:0,33,320	0/0:12,2:15:4.21:0,4,219	0/1:21,2:26:5.34:5,0,409	0/0:10,0:10:27.04:0,27,263	0/0:26,0:26:63.49:0,63,587	0/0:12,0:12:17.63:0,18,89	0/0:10,1:11:3.39:0,3,185	0/0:26,1:30:20.59:0,21,479	0/0:26,2:28:2.87:0,3,489	0/0:8,0:8:2.17:0,2,165	0/0:16,0:16:13.63:0,14,259	0/1:12,1:13:7.62:8,0,256	0/0:20,0:22:36.47:0,36,462	1/1:4,18:24:53.78:403,54,0	0/0:14,1:15:12.69:0,13,270	1/1:4,8:12:5:115,5,0
chr10	99134520	.	A	AG	327.92	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.047;DP=555;FS=0.761;HRun=0;HaplotypeScore=80.9207;InbreedingCoeff=0.9322;MQ=78.35;MQ0=5;MQRankSum=-6.783;QD=8.20;ReadPosRankSum=0.384;VQSLOD=3.1584;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,12:28:6.84:293,7,0	0/0:7,0:7:17.64:0,18,205	0/0:35,0:20:36.93:0,37,271	0/0:30,0:15:28.94:0,29,212	0/0:29,0:29:87.14:0,87,1052	0/0:20,0:20:57.07:0,57,685	0/0:8,0:8:21.05:0,21,261	0/0:32,0:32:89.93:0,90,781	0/0:18,0:18:54.06:0,54,589	0/0:18,0:18:45.95:0,46,522	0/0:22,0:22:63.09:0,63,775	0/0:11,0:11:33.07:0,33,369	0/0:18,0:18:54.11:0,54,643	0/0:17,0:17:48.07:0,48,530	0/0:26,0:26:69.12:0,69,828	0/0:9,0:9:27.09:0,27,376	0/0:30,0:30:86.18:0,86,1007	1/1:8,4:12:14.59:142,15,0	0/0:11,0:11:31.31:0,31,372	0/0:30,0:30:74.44:0,74,878	0/0:28,0:28:83.73:0,84,982	0/0:8,0:8:22.60:0,23,274	0/0:16,0:16:45.09:0,45,531	0/0:14,0:14:39.08:0,39,489	0/0:23,0:23:62.76:0,63,778	0/0:28,0:28:73.07:0,73,609	0/0:16,0:16:48.07:0,48,562	0/0:11,0:11:26.95:0,27,231
chr10	99134521	.	A	AAAAG	867.84	PASS	AB=0.743;AC=2;AF=0.036;AN=56;BaseQRankSum=6.195;DP=561;FS=2.652;HRun=0;HaplotypeScore=112.8261;InbreedingCoeff=0.3481;MQ=76.93;MQ0=5;MQRankSum=-4.044;QD=20.18;ReadPosRankSum=-0.026;VQSLOD=3.4741;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,12:29:0.25:703,0,0	0/0:8,0:8:21.02:0,21,285	0/0:35,0:20:12.46:0,12,148	0/0:29,0:14:22.58:0,23,206	0/0:29,0:29:76.13:0,76,1225	0/0:19,0:19:57.09:0,57,836	0/0:8,0:8:21.02:0,21,314	0/0:31,0:31:81.18:0,81,931	0/0:17,0:17:45:0,45,612	0/0:18,0:18:48.05:0,48,643	0/0:23,0:23:63.08:0,63,942	0/0:11,0:11:32.90:0,33,380	0/0:18,0:18:45.11:0,45,689	0/0:17,0:17:39.11:0,39,558	0/0:26,0:26:66.13:0,66,994	0/0:9,0:9:27.09:0,27,482	0/0:30,0:30:86.85:0,87,1231	0/1:10,4:14:35.98:254,0,36	0/0:11,0:11:31.64:0,32,471	0/0:30,0:30:84.07:0,84,1092	0/0:30,0:30:75.19:0,75,1159	0/0:8,0:8:24.05:0,24,364	0/0:16,0:16:45.07:0,45,636	0/0:14,0:14:39.12:0,39,636	0/0:24,0:24:66.11:0,66,952	0/0:30,0:30:83.86:0,84,965	0/0:16,0:16:42.06:0,42,622	0/0:11,0:11:27.04:0,27,318
chr10	99134764	.	C	CT	1239.86	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.484;DP=523;FS=2.623;HRun=6;HaplotypeScore=54.2998;InbreedingCoeff=0.9769;MQ=76.18;MQ0=0;MQRankSum=-1.051;QD=22.96;ReadPosRankSum=1.984;VQSLOD=2.9291;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:92.61:720,93,0	0/0:8,0:8:21.05:0,21,214	0/0:16,0:16:21.21:0,21,202	0/0:7,1:7:12.01:0,12,117	0/0:22,0:22:57.13:0,57,581	0/0:18,0:18:54.12:0,54,551	0/0:17,0:17:42.09:0,42,428	0/0:38,0:38:96.21:0,96,979	0/0:16,0:16:45.10:0,45,458	0/0:14,0:14:39.09:0,39,397	0/0:17,0:17:42.09:0,42,428	0/0:15,0:15:42.10:0,42,429	0/0:11,0:11:33.08:0,33,337	0/0:17,0:17:45.10:0,45,459	0/0:24,0:24:63.14:0,63,643	0/0:18,0:18:45.10:0,45,459	0/0:35,0:35:90.19:0,90,918	1/1:2,18:20:51.16:642,51,0	0/0:15,0:15:36.08:0,36,367	0/0:22,0:22:57.12:0,57,581	0/0:16,0:16:45.10:0,45,459	0/0:10,0:10:24.05:0,24,245	0/0:16,0:16:45.05:0,45,441	0/0:18,0:18:54.12:0,54,551	0/0:24,0:24:72.16:0,72,735	0/0:30,0:30:75.17:0,75,765	0/0:17,0:17:48.09:0,48,482	0/0:7,0:7:21.05:0,21,214
chr10	99134768	.	T	TA	1458.94	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.745;DP=524;FS=2.576;HRun=0;HaplotypeScore=55.2994;InbreedingCoeff=0.9884;MQ=80.47;MQ0=0;MQRankSum=-4.332;QD=27.02;ReadPosRankSum=2.812;VQSLOD=4.0004;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:93.32:1419,93,0	0/0:7,0:7:21.07:0,21,294	0/0:17,0:17:38.09:0,38,402	0/0:12,0:11:17.21:0,17,248	0/0:20,0:20:60.19:0,60,823	0/0:20,0:20:57.18:0,57,781	0/0:17,0:17:51.14:0,51,662	0/0:37,0:37:99:0,105,1417	0/0:15,0:15:45.15:0,45,629	0/0:14,0:14:42.12:0,42,563	0/0:15,0:15:45.14:0,45,615	0/0:16,0:16:45.14:0,45,612	0/0:11,0:11:33.11:0,33,454	0/0:16,0:16:48.15:0,48,654	0/0:23,0:23:69.21:0,69,932	0/0:16,0:16:48.15:0,48,657	0/0:41,0:41:99:0,123,1527	1/1:19,0:19:21.88:161,22,0	0/0:14,0:14:39.12:0,39,531	0/0:20,0:20:60.19:0,60,823	0/0:16,0:16:45.15:0,45,629	0/0:10,0:10:27.08:0,27,362	0/0:16,0:16:48.15:0,48,653	0/0:18,0:18:54.18:0,54,755	0/0:25,0:25:75.24:0,75,1034	0/0:28,0:28:81.26:0,81,1104	0/0:19,0:19:54.15:0,54,720	0/0:7,0:7:21.07:0,21,293
chr10	99136125	.	T	TCTCA	5145.89	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.860;DP=688;FS=1.044;HRun=0;HaplotypeScore=111.4247;InbreedingCoeff=0.9842;MQ=85.06;MQ0=0;MQRankSum=-4.104;QD=72.48;ReadPosRankSum=0.790;VQSLOD=7.0173;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,43:48:99:3408,120,0	0/0:11,0:11:33.11:0,33,692	0/0:24,0:24:72.25:0,72,1436	0/0:22,0:22:51.38:0,51,1116	0/0:20,0:20:54.17:0,54,1093	0/0:16,0:16:48.14:0,48,967	0/0:14,0:14:42.14:0,42,881	0/0:34,0:34:96.31:0,96,1888	0/0:32,0:32:96.33:0,96,2002	0/0:32,0:32:96.30:0,96,1926	0/0:27,0:27:75.26:0,75,1573	0/0:28,0:28:84.23:0,84,1655	0/0:23,0:23:60.21:0,60,1246	0/0:17,0:17:48.15:0,48,965	0/0:35,0:35:99:0,99,2018	0/0:21,0:21:63.22:0,63,1310	0/0:27,0:27:81.22:0,81,1550	1/1:1,21:22:60.21:1738,60,0	0/0:13,0:13:39.09:0,39,703	0/0:31,0:31:93.32:0,93,1910	0/0:31,0:31:90.29:0,90,1824	0/0:20,0:20:60.21:0,60,1222	0/0:15,0:15:42.13:0,42,839	0/0:39,0:39:99:0,117,2396	0/0:24,0:24:69.24:0,69,1447	0/0:26,0:25:75.25:0,75,1536	0/0:31,0:31:93.32:0,93,1927	0/0:4,0:4:12.04:0,12,252
chr10	99136412	.	G	GGTGT	7970.67	PASS	AB=0.781;AC=46;AF=0.821;AN=56;BaseQRankSum=-2.102;DP=815;FS=9.115;HRun=0;HaplotypeScore=155.4646;InbreedingCoeff=0.1863;MQ=70.51;MQ0=16;MQRankSum=0.489;QD=10.68;ReadPosRankSum=-0.653;VQSLOD=3.5706;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:12.03:151,12,0	1/1:7,0:10:8.93:168,9,0	0/0:46,0:25:3:0,3,28	0/1:37,0:17:0:0,0,0	0/1:15,6:25:38.17:73,0,38	1/1:11,9:25:8.77:155,9,0	0/1:21,6:31:9.46:152,0,9	1/1:38,0:38:12.93:202,13,0	1/1:10,12:25:26.83:581,27,0	1/1:21,6:30:34.62:490,35,0	1/1:8,5:19:3.01:71,3,0	1/1:13,11:25:35.84:730,36,0	1/1:19,12:34:16.65:886,17,0	1/1:18,7:30:12.22:226,12,0	1/1:15,14:36:38.34:691,38,0	0/0:17,0:23:30.07:0,30,386	1/1:17,9:31:32.74:606,33,0	0/1:18,0:25:16.42:16,0,160	1/1:15,0:15:6.02:82,6,0	1/1:12,7:21:6.02:142,6,0	0/1:38,13:60:99:324,0,143	1/1:15,2:25:14.31:179,14,0	0/1:12,6:21:38.46:134,0,38	1/1:26,21:56:50.88:1077,51,0	1/1:13,7:23:8.77:154,9,0	1/1:30,0:35:35.89:483,36,0	1/1:8,7:16:6.23:143,6,0	1/1:5,0:8:3.01:52,3,0
chr10	99136986	.	AT	A	508.44	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.374;DP=594;FS=0.787;HRun=9;HaplotypeScore=56.8336;InbreedingCoeff=0.9972;MQ=78.54;MQ0=0;MQRankSum=-2.095;QD=18.16;ReadPosRankSum=0.945;VQSLOD=3.8373;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:66.04:603,66,0	0/0:9,0:9:27.08:0,27,310	0/0:16,0:16:30.08:0,30,328	0/0:14,0:15:38.83:0,39,393	0/0:20,0:20:57.16:0,57,643	0/0:23,0:23:63.06:0,63,691	0/0:18,0:18:48.13:0,48,543	0/0:27,0:27:72.16:0,72,788	0/0:24,0:24:69.12:0,69,750	0/0:35,0:35:67.54:0,68,1013	0/0:28,0:28:81.23:0,81,925	0/0:18,0:18:51.13:0,51,568	0/0:10,0:10:30.09:0,30,346	0/0:18,0:18:51.11:0,51,565	0/0:22,0:22:60.17:0,60,682	0/0:24,0:24:66.17:0,66,743	0/0:33,0:33:90.25:0,90,1027	0/0:13,0:13:33.04:0,33,354	0/0:25,0:25:66.20:0,66,761	0/0:27,0:27:69.21:0,69,796	0/0:14,0:14:33.10:0,33,380	0/0:20,0:20:53.17:0,53,578	0/0:21,0:21:54.14:0,54,612	0/0:16,0:16:48.06:0,48,536	0/0:20,0:20:57.17:0,57,658	0/0:25,1:26:44.69:0,45,746	0/0:32,0:32:90.22:0,90,1006	0/0:12,0:12:36.07:0,36,386
chr10	99137214	.	C	CT	1629.33	PASS	AB=0.861;AC=12;AF=0.214;AN=56;BaseQRankSum=-3.762;DP=530;FS=0.430;HRun=11;HaplotypeScore=59.5016;InbreedingCoeff=0.7316;MQ=72.19;MQ0=0;MQRankSum=0.714;QD=10.38;ReadPosRankSum=-4.686;VQSLOD=1.5737;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:25:40.94:216,41,0	0/0:7,0:7:17.92:0,18,137	0/0:9,0:9:16.77:0,17,111	0/0:7,0:8:1.06:0,1,23	0/0:24,0:24:31.20:0,31,392	0/0:19,0:19:47.78:0,48,371	0/0:23,0:23:53.72:0,54,411	1/1:7,30:38:26.41:779,26,0	0/0:15,0:15:41.84:0,42,325	0/1:28,4:32:11.01:11,0,370	0/0:21,0:22:46.81:0,47,354	0/0:12,1:14:10.45:0,10,254	0/0:19,0:19:47.76:0,48,366	0/0:18,0:18:14.53:0,15,294	0/0:21,0:21:53.76:0,54,416	0/0:16,0:18:19.07:0,19,265	0/0:15,0:16:37.88:0,38,284	1/1:2,0:14:26.07:131,26,0	0/0:21,1:23:25.30:0,25,361	0/0:27,2:30:10.83:0,11,469	0/0:6,0:7:16.98:0,17,122	0/0:20,0:20:44.79:0,45,348	0/0:18,1:19:17.34:0,17,316	0/1:8,2:10:12.56:13,0,98	0/0:20,1:21:20.35:0,20,341	1/1:10,17:27:24.76:405,25,0	0/0:20,0:20:21.68:0,22,296	1/1:2,8:11:26.88:253,27,0
chr10	99137584	.	A	ATT	2765.26	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.116;DP=791;FS=11.860;HRun=3;HaplotypeScore=101.1997;InbreedingCoeff=0.9918;MQ=85.81;MQ0=0;MQRankSum=-3.928;QD=41.90;ReadPosRankSum=-1.410;VQSLOD=2.0673;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,37:42:99:1856,102,0	0/0:13,0:13:39.13:0,39,542	0/0:29,0:29:81.22:0,81,1103	0/0:24,0:24:66.22:0,66,915	0/0:21,0:21:60.19:0,60,823	0/0:21,0:21:63.21:0,63,882	0/0:28,0:28:84.26:0,84,1158	0/0:27,0:27:69.23:0,69,966	0/0:31,0:31:90.30:0,90,1259	0/0:28,0:28:78.24:0,78,1060	0/0:18,0:18:51.17:0,51,713	0/0:31,0:31:84.25:0,84,1143	0/0:26,0:26:78.26:0,78,1092	0/0:33,0:33:93.31:0,93,1299	0/0:42,0:42:99:0,123,1686	0/0:30,0:30:84.27:0,84,1158	0/0:44,0:44:99:0,123,1701	1/1:3,21:24:60.13:1031,60,0	0/0:17,0:17:45.15:0,45,630	0/0:18,0:18:54.18:0,54,754	0/0:70,0:70:99:0,196,2709	0/0:23,0:23:60.20:0,60,840	0/0:14,0:14:42.14:0,42,588	0/0:34,0:34:99:0,102,1424	0/0:24,0:24:66.17:0,66,885	0/0:39,0:39:99:0,117,1637	0/0:34,0:34:93.29:0,93,1283	0/0:6,0:6:15.05:0,15,210
chr10	99137767	.	AC	A	2006.95	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=11.732;DP=687;FS=2.261;HRun=5;HaplotypeScore=71.1960;InbreedingCoeff=0.9857;MQ=86.35;MQ0=0;MQRankSum=-4.739;QD=25.73;ReadPosRankSum=3.854;VQSLOD=3.1523;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,48:53:99:1380,123,0	0/0:11,0:11:33.11:0,33,451	0/0:18,0:18:48.07:0,48,591	0/0:28,0:28:83.67:0,84,987	0/0:19,0:19:57.17:0,57,739	0/0:16,0:16:45.14:0,45,594	0/0:28,0:28:63.21:0,63,862	0/0:38,0:38:99:0,102,1284	0/0:20,0:20:60.16:0,60,797	0/0:29,0:29:84.25:0,84,1090	0/0:16,0:16:45.14:0,45,598	0/0:31,0:31:90.27:0,90,1185	0/0:19,0:19:51.15:0,51,666	0/0:17,0:17:48.14:0,48,624	0/0:34,0:34:99:0,99,1320	0/0:22,0:22:60.20:0,60,820	0/0:34,0:34:93.31:0,93,1271	1/1:2,23:25:66.19:748,66,0	0/0:20,0:20:60.20:0,60,819	0/0:22,0:22:63.21:0,63,858	0/0:47,0:47:99:0,135,1759	0/0:16,0:16:48.14:0,48,630	0/0:29,0:29:84.27:0,84,1126	0/0:21,0:21:57.19:0,57,778	0/0:17,0:17:45.14:0,45,595	0/0:32,0:32:90.29:0,90,1217	0/0:20,0:20:54.18:0,54,737	0/0:5,0:5:12.51:0,13,165
chr10	99138847	.	TTTAA	T	1994.68	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=9.169;DP=641;FS=17.611;HRun=0;HaplotypeScore=103.5192;InbreedingCoeff=0.8340;MQ=75.20;MQ0=1;MQRankSum=-4.684;QD=32.17;ReadPosRankSum=0.170;VQSLOD=2.5387;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:32:63.22:1302,63,0	0/0:9,0:9:27.09:0,27,783	0/0:11,0:12:10.89:0,11,615	0/1:14,0:14:2.48:2,0,774	0/0:18,0:18:54.19:0,54,1494	0/0:20,0:20:60.21:0,60,1695	0/0:32,0:32:96.33:0,96,2783	0/0:22,0:22:66.23:0,66,1886	0/0:20,0:20:60.21:0,60,1724	0/0:24,0:24:69.23:0,69,1894	0/0:20,0:20:60.20:0,60,1608	0/0:35,0:35:99:0,105,2867	0/0:20,0:20:60.19:0,60,1616	0/0:24,0:24:72.25:0,72,2057	0/0:28,0:28:84.29:0,84,2403	0/0:20,0:20:60.21:0,60,1735	0/0:48,0:48:99:0,144,4097	1/1:0,15:15:39.13:813,39,0	0/0:22,0:22:66.23:0,66,1890	0/0:17,0:17:51.18:0,51,1431	0/0:33,0:33:96.33:0,96,2755	0/0:19,0:19:57.20:0,57,1602	0/0:22,0:22:66.23:0,66,1798	0/0:32,0:32:96.33:0,96,2738	0/0:15,0:15:45.15:0,45,1205	0/0:27,0:27:81.27:0,81,2253	0/0:29,0:29:87.27:0,87,2370	0/0:11,0:11:33.11:0,33,918
chr10	99139026	.	A	AT	845.51	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=8.928;DP=425;FS=5.858;HRun=5;HaplotypeScore=55.6872;InbreedingCoeff=0.7549;MQ=77.52;MQ0=0;MQRankSum=-5.436;QD=14.58;ReadPosRankSum=-1.413;VQSLOD=2.3279;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:51.08:637,51,0	0/0:4,0:4:12.03:0,12,129	0/0:20,0:18:17.80:0,18,249	0/1:27,0:22:22.56:23,0,154	0/0:14,0:14:39.10:0,39,419	0/0:11,0:11:27.05:0,27,282	0/0:21,0:21:63.16:0,63,677	0/0:20,0:20:48.11:0,48,516	0/0:17,0:17:48.12:0,48,516	0/0:11,0:11:27.06:0,27,290	0/0:18,0:18:42.09:0,42,445	0/0:13,0:13:39.10:0,39,419	0/0:11,0:11:33.08:0,33,355	0/0:12,0:12:33.08:0,33,354	0/0:13,0:13:36.09:0,36,387	0/0:12,0:12:33.06:0,33,346	0/0:34,0:34:93.23:0,93,999	1/1:2,6:8:24.08:315,24,0	0/0:16,0:16:42.11:0,42,451	0/0:9,0:9:24.06:0,24,258	0/0:13,0:13:36.07:0,36,378	0/0:19,0:19:54.14:0,54,580	0/0:11,0:11:33.08:0,33,355	0/0:15,0:15:45.11:0,45,483	0/0:16,0:16:45.09:0,45,474	0/0:19,0:19:54.14:0,54,580	0/0:14,0:14:39.10:0,39,419	0/0:4,0:4:12.03:0,12,129
chr10	99139140	.	C	CT	1037.69	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.507;DP=561;FS=0.679;HRun=7;HaplotypeScore=64.3141;InbreedingCoeff=0.9957;MQ=76.33;MQ0=0;MQRankSum=-6.440;QD=26.61;ReadPosRankSum=0.580;VQSLOD=4.2987;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:29:72.22:869,72,0	0/0:9,0:9:24.04:0,24,231	0/0:13,0:13:22.27:0,22,199	0/0:18,0:18:32.95:0,33,302	0/0:21,0:21:57.08:0,57,550	0/0:14,0:14:39.06:0,39,376	0/0:19,0:19:48.05:0,48,457	0/0:24,0:24:44.01:0,44,393	0/0:12,0:12:33.02:0,33,311	0/0:27,0:27:75.10:0,75,716	0/0:22,0:22:63.09:0,63,603	0/0:14,0:14:39.06:0,39,377	0/0:22,0:22:60.07:0,60,572	0/0:21,0:21:48.07:0,48,463	0/0:20,0:20:57.06:0,57,539	0/0:21,0:21:63.06:0,63,596	0/0:32,0:32:87.14:0,87,840	1/1:1,9:10:24.07:290,24,0	0/0:18,0:18:48.04:0,48,450	0/0:26,0:26:72.10:0,72,691	0/0:12,0:12:33.05:0,33,319	0/0:16,0:16:39.06:0,39,377	0/0:21,0:21:51.07:0,51,488	0/0:29,0:29:84.11:0,84,803	0/0:30,0:30:90.15:0,90,869	0/0:24,0:24:68.13:0,68,640	0/0:25,0:25:72.12:0,72,695	0/0:12,0:12:36.06:0,36,348
chr10	99139551	.	AG	A	5712.97	PASS	AB=0.843;AC=19;AF=0.339;AN=56;BaseQRankSum=17.347;DP=1638;FS=287.514;HRun=1;HaplotypeScore=684.7086;InbreedingCoeff=-0.5182;MQ=53.47;MQ0=0;MQRankSum=-14.138;QD=4.76;ReadPosRankSum=7.235;VQSLOD=-0.1925;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:89.96:0,90,1390	0/1:25,3:28:92.04:92,0,416	0/0:43,0:38:74.93:0,75,1241	0/0:43,0:36:63.92:0,64,1052	0/0:42,5:47:37.05:0,37,579	0/1:26,7:33:99:177,0,771	0/1:47,8:55:99:142,0,1228	0/1:65,10:69:99:279,0,2118	0/1:54,25:79:99:562,0,1799	0/1:91,13:103:99:273,0,3323	0/0:28,7:35:30.96:0,31,490	0/1:85,33:118:99:622,0,2261	0/1:67,30:97:99:620,0,1797	0/1:61,17:78:99:364,0,1484	0/1:65,28:92:99:752,0,1489	0/1:54,30:84:99:944,0,1930	0/1:23,2:25:34.77:35,0,622	0/0:29,0:29:72.24:0,72,1132	0/1:34,4:35:66.49:66,0,1202	0/0:39,6:45:9.71:0,10,690	0/0:85,2:84:65.43:0,65,2265	0/1:59,12:71:21.89:22,0,925	0/0:43,6:49:16.07:0,16,814	0/1:39,5:44:35.15:35,0,600	0/1:44,9:53:99:215,0,787	0/1:59,13:71:99:365,0,2025	0/1:31,7:38:99:106,0,754	0/1:12,2:14:41.28:41,0,533
chr10	99139670	.	AG	A	2247.02	PASS	AB=0.829;AC=14;AF=0.250;AN=56;BaseQRankSum=17.309;DP=1764;FS=54.732;HRun=1;HaplotypeScore=590.4808;InbreedingCoeff=-0.3464;MQ=58.11;MQ0=7;MQRankSum=-14.221;QD=2.57;ReadPosRankSum=0.351;VQSLOD=0.3209;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:68,0:74:99:0,155,2258	0/1:16,7:23:70.14:70,0,594	0/0:63,0:40:42.94:0,43,1139	0/0:65,0:44:69.36:0,69,924	0/0:30,11:41:28.07:0,28,451	0/0:28,3:31:1.56:0,2,1163	0/0:64,6:70:41.59:0,42,1750	0/1:62,7:64:99:122,0,2233	0/1:67,14:81:99:177,0,2246	0/1:84,16:98:99:432,0,3100	0/1:23,6:29:41.51:42,0,529	0/0:86,9:95:42.70:0,43,2885	0/1:71,15:89:72.29:72,0,2473	0/1:55,16:72:99:126,0,1631	0/0:80,22:102:99:0,112,2712	0/1:71,13:84:99:189,0,2575	0/0:33,1:34:35.88:0,36,1167	0/0:40,0:41:99:0,102,1424	0/0:47,2:46:50.95:0,51,1885	0/1:29,11:41:82.83:83,0,678	0/0:136,2:137:99:0,279,5014	0/1:55,13:69:99:110,0,1200	0/1:38,8:46:23.49:23,0,765	0/0:55,8:63:54.60:0,55,1904	0/1:32,13:45:99:189,0,1159	0/1:60,18:78:99:545,0,2292	0/1:40,10:50:99:222,0,1331	0/0:18,2:19:38.81:0,39,821
chr10	99139725	.	GT	G	2145.91	PASS	AB=0.553;AC=3;AF=0.054;AN=56;BaseQRankSum=4.874;DP=1043;FS=2.335;HRun=1;HaplotypeScore=165.3257;InbreedingCoeff=0.6459;MQ=72.26;MQ0=0;MQRankSum=3.323;QD=29.00;ReadPosRankSum=1.001;VQSLOD=3.4897;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,48:53:99:1793,129,0	0/0:16,0:16:45.15:0,45,718	0/0:32,0:31:56.71:0,57,1069	0/0:29,0:28:75.21:0,75,1095	0/0:30,0:30:63.21:0,63,1005	0/0:28,0:28:81.26:0,81,1271	0/0:47,0:47:99:0,141,2229	0/0:33,0:33:99:0,99,1520	0/0:56,0:56:99:0,154,2410	0/0:52,0:52:99:0,156,2455	0/0:26,0:26:54.18:0,54,862	0/0:63,0:63:99:0,163,2535	0/0:56,0:56:99:0,148,2326	0/0:45,0:45:99:0,123,1939	0/0:62,0:62:99:0,163,2535	0/0:44,0:44:99:0,111,1773	0/0:24,0:24:72.25:0,72,1151	0/1:4,17:21:48.53:459,0,49	0/0:26,0:26:78.26:0,78,1229	0/0:19,0:19:57.19:0,57,908	0/0:71,0:71:99:0,211,3277	0/0:42,0:42:99:0,105,1676	0/0:27,0:27:78.22:0,78,1195	0/0:31,0:31:87.30:0,87,1390	0/0:28,0:28:78.24:0,78,1221	0/0:49,0:49:99:0,144,2293	0/0:26,0:26:69.22:0,69,1077	0/0:7,0:7:21.07:0,21,336
chr10	99140095	.	A	AC	345.02	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.423;DP=804;FS=0.000;HRun=2;HaplotypeScore=86.5133;InbreedingCoeff=0.9910;MQ=82.99;MQ0=0;MQRankSum=-7.521;QD=7.34;ReadPosRankSum=-0.467;VQSLOD=0.5130;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,19:28:42.87:254,43,0	0/0:9,0:9:27.08:0,27,335	0/0:26,0:26:72.21:0,72,879	0/0:23,0:23:53.24:0,53,596	0/0:22,0:22:66.21:0,66,817	0/0:17,0:17:48.15:0,48,594	0/0:36,0:36:99:0,108,1336	0/0:25,0:25:66.20:0,66,809	0/0:43,0:43:99:0,120,1487	0/0:31,0:31:90.28:0,90,1106	0/0:22,0:22:57.18:0,57,705	0/0:32,0:32:87.26:0,87,1064	0/0:31,0:31:90.27:0,90,1100	0/0:36,0:36:99:0,105,1286	0/0:44,0:44:99:0,123,1509	0/0:41,0:41:99:0,120,1487	0/0:32,0:32:96.26:0,96,1162	1/1:8,9:17:29.60:213,30,0	0/0:16,0:16:42.13:0,42,519	0/0:20,0:20:57.18:0,57,707	0/0:74,0:74:99:0,223,2751	0/0:33,0:33:99:0,99,1227	0/0:20,0:20:57.18:0,57,704	0/0:33,0:33:90.26:0,90,1098	0/0:24,0:24:69.22:0,69,853	0/0:26,0:26:72.22:0,72,883	0/0:36,0:35:96.28:0,96,1163	0/0:5,0:5:15.05:0,15,185
chr10	99140099	.	CT	C	468.46	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.088;DP=804;FS=0.000;HRun=1;HaplotypeScore=85.1411;InbreedingCoeff=0.9913;MQ=80.22;MQ0=0;MQRankSum=-7.266;QD=10.18;ReadPosRankSum=-1.627;VQSLOD=0.7249;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,20:27:41.07:210,41,0	0/0:9,0:9:27.09:0,27,431	0/0:25,0:25:72.23:0,72,1135	0/0:18,0:18:54.07:0,54,800	0/0:23,0:23:66.22:0,66,1039	0/0:19,0:19:54.17:0,54,829	0/0:38,0:38:99:0,114,1797	0/0:25,0:25:75.25:0,75,1177	0/0:44,0:44:99:0,132,2060	0/0:35,0:35:99:0,102,1594	0/0:21,0:21:60.20:0,60,953	0/0:31,0:31:87.29:0,87,1374	0/0:33,0:33:99:0,99,1515	0/0:36,0:36:99:0,108,1702	0/0:41,0:41:99:0,123,1910	0/0:41,0:41:99:0,123,1931	0/0:33,0:33:99:0,99,1558	1/1:6,12:18:44.49:380,44,0	0/0:15,0:15:42.11:0,42,645	0/0:21,0:21:60.20:0,60,941	0/0:77,0:77:99:0,226,3544	0/0:34,0:34:99:0,102,1557	0/0:19,0:19:57.18:0,57,886	0/0:32,0:32:96.30:0,96,1508	0/0:24,0:24:69.23:0,69,1103	0/0:27,0:27:78.26:0,78,1231	0/0:32,0:31:90.31:0,90,1432	0/0:5,0:5:15.03:0,15,216
chr10	99140200	.	G	GAAA	2547.97	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=11.319;DP=824;FS=4.054;HRun=6;HaplotypeScore=120.7379;InbreedingCoeff=1.0000;MQ=79.61;MQ0=0;MQRankSum=-7.104;QD=38.03;ReadPosRankSum=0.357;VQSLOD=2.2677;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,33:41:99:1705,102,0	0/0:14,0:14:42.14:0,42,596	0/0:25,0:25:57.13:0,57,741	0/0:25,0:25:63.17:0,63,864	0/0:26,0:26:75.22:0,75,1027	0/0:22,0:22:66.19:0,66,899	0/0:27,0:27:75.22:0,75,1027	0/0:32,0:32:96.30:0,96,1329	0/0:24,0:24:60.10:0,60,791	0/0:38,0:38:99:0,105,1490	0/0:24,0:24:63.21:0,63,893	0/0:39,0:39:99:0,108,1504	0/0:24,0:24:66.22:0,66,933	0/0:40,0:40:99:0,105,1468	0/0:43,0:43:99:0,108,1497	0/0:36,0:36:99:0,105,1470	0/0:40,0:40:99:0,111,1520	1/1:9,17:26:56.83:965,57,0	0/0:26,0:26:75.22:0,75,1028	0/0:21,0:21:60.17:0,60,816	0/0:47,0:48:99:0,131,1871	0/0:29,0:29:84.26:0,84,1172	0/0:26,0:26:72.16:0,72,963	0/0:34,0:34:99:0,102,1448	0/0:18,0:18:54.16:0,54,746	0/0:35,0:35:99:0,99,1351	0/0:26,0:26:69.20:0,69,960	0/0:15,0:15:45.15:0,45,639
chr10	99140207	.	C	CG	1686.37	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=11.501;DP=812;FS=7.037;HRun=0;HaplotypeScore=87.1254;InbreedingCoeff=0.9999;MQ=77.28;MQ0=0;MQRankSum=-7.181;QD=26.35;ReadPosRankSum=3.175;VQSLOD=4.4362;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,39:42:81.68:1152,82,0	0/0:14,0:14:42.14:0,42,587	0/0:20,0:20:59.83:0,60,727	0/0:23,0:23:59.77:0,60,854	0/0:24,0:24:72.23:0,72,987	0/0:22,0:22:63.21:0,63,879	0/0:29,0:29:87.27:0,87,1196	0/0:36,0:36:99:0,108,1496	0/0:20,0:20:60.19:0,60,821	0/0:40,0:40:99:0,114,1577	0/0:23,0:23:69.23:0,69,963	0/0:36,0:36:99:0,108,1510	0/0:23,0:23:69.23:0,69,963	0/0:37,0:37:99:0,108,1508	0/0:41,0:41:99:0,120,1673	0/0:37,0:37:99:0,111,1551	0/0:39,0:39:99:0,114,1576	1/1:5,17:22:33.49:656,33,0	0/0:29,0:29:87.29:0,87,1216	0/0:19,0:19:57.19:0,57,796	0/0:49,0:49:99:0,144,1983	0/0:30,0:30:90.28:0,90,1223	0/0:25,0:25:75.13:0,75,987	0/0:35,0:35:99:0,105,1468	0/0:18,0:18:54.18:0,54,755	0/0:32,0:32:93.31:0,93,1301	0/0:30,0:30:87.27:0,87,1194	0/0:17,0:17:51.17:0,51,711
chr10	99141346	.	G	GC	613.30	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=4.982;DP=542;FS=15.403;HRun=9;HaplotypeScore=66.5141;InbreedingCoeff=0.7914;MQ=73.47;MQ0=3;MQRankSum=0.590;QD=8.64;ReadPosRankSum=1.047;VQSLOD=0.6111;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:29:34.30:181,34,0	0/0:14,0:14:35.74:0,36,289	0/0:28,0:18:30.77:0,31,228	0/0:24,0:14:29.47:0,29,186	0/0:27,0:27:21.77:0,22,453	0/0:20,0:20:45.85:0,46,427	0/0:25,1:26:26.31:0,26,428	0/0:26,0:27:25.20:0,25,375	0/0:16,0:17:27.44:0,27,359	0/0:16,0:16:30.85:0,31,256	0/1:17,0:17:1.44:1,0,236	0/0:18,0:18:49.19:0,49,408	0/0:21,0:21:33.49:0,33,382	0/0:14,0:14:7.75:0,8,245	0/0:11,0:11:29.94:0,30,250	0/0:16,0:16:14.59:0,15,242	0/0:25,0:26:67.93:0,68,566	1/1:4,20:24:51.11:552,51,0	0/0:16,0:16:37.48:0,37,295	0/0:9,0:9:9.81:0,10,101	0/0:20,0:20:29.99:0,30,316	0/0:19,0:19:50.98:0,51,440	0/0:12,0:12:23.95:0,24,199	0/0:20,0:20:44.94:0,45,383	0/0:21,0:21:52.45:0,52,419	0/0:17,0:17:35.94:0,36,300	0/0:21,0:21:29.64:0,30,424	0/0:11,0:11:11.97:0,12,104
chr10	99141355	.	C	CCCT	660.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.590;DP=530;FS=5.337;HRun=0;HaplotypeScore=86.5915;InbreedingCoeff=0.8219;MQ=68.44;MQ0=6;MQRankSum=-2.491;QD=16.92;ReadPosRankSum=-1.373;VQSLOD=2.8592;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,28:38:41.95:755,42,0	0/0:13,0:13:39.10:0,39,539	0/0:27,0:15:15.14:0,15,370	0/0:23,0:11:32.98:0,33,345	0/0:26,0:26:42.22:0,42,924	0/0:17,0:19:49.65:0,50,762	0/0:23,0:23:68.41:0,68,866	0/0:27,0:27:11.02:0,11,781	0/0:16,0:16:5.12:0,5,665	0/0:11,0:11:33.09:0,33,458	0/0:16,0:16:36.94:0,37,525	0/0:19,0:19:57:0,57,783	0/0:18,0:20:30.83:0,31,748	0/0:13,0:13:27.65:0,28,490	0/0:14,0:14:42.03:0,42,539	0/0:15,0:15:37.42:0,37,538	0/0:29,0:29:84.13:0,84,1164	0/0:24,0:24:45.56:0,46,190	0/0:14,0:14:38.04:0,38,574	0/0:10,0:10:21.20:0,21,253	0/0:20,0:19:44.52:0,45,685	0/0:19,0:19:57.14:0,57,843	0/0:10,0:11:30.02:0,30,400	0/0:16,0:16:31.42:0,31,677	0/0:22,0:22:61.83:0,62,789	0/0:19,0:18:50.96:0,51,614	0/0:20,0:20:45.86:0,46,825	0/0:5,0:5:12.02:0,12,193
chr10	99141459	.	CT	C	1820.03	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.135;DP=595;FS=20.574;HRun=4;HaplotypeScore=62.1368;InbreedingCoeff=0.9864;MQ=80.42;MQ0=1;MQRankSum=-4.118;QD=28.00;ReadPosRankSum=2.682;VQSLOD=1.9479;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:87.27:1043,87,0	0/0:6,0:6:18.04:0,18,221	0/0:30,0:30:85.12:0,85,1101	0/0:15,0:15:27.17:0,27,462	0/0:21,0:21:57.18:0,57,780	0/0:24,0:24:66.22:0,66,924	0/0:30,0:30:87.21:0,87,1140	0/0:13,0:13:36.07:0,36,451	0/0:17,0:17:48.15:0,48,655	0/0:19,0:19:57.17:0,57,758	0/0:15,0:15:42.13:0,42,564	0/0:24,0:24:69.20:0,69,929	0/0:18,0:18:54.16:0,54,724	0/0:21,0:21:63.21:0,63,881	0/0:23,0:23:69.22:0,69,949	0/0:20,0:20:60.19:0,60,822	0/0:35,0:35:96.27:0,96,1288	1/1:1,28:29:75.23:899,75,0	0/0:12,0:11:30.09:0,30,405	0/0:27,0:27:75.23:0,75,1005	0/0:34,0:34:96.27:0,96,1270	0/0:19,0:19:54.18:0,54,755	0/0:21,0:21:63.16:0,63,849	0/0:33,0:33:90.26:0,90,1208	0/0:9,0:9:27.09:0,27,378	0/0:22,0:22:60.19:0,60,822	0/0:17,0:17:51.16:0,51,696	0/0:5,0:5:15.05:0,15,210
chr10	99141903	.	ATCCC	A	1496.01	PASS	AB=0.786;AC=7;AF=0.125;AN=56;BaseQRankSum=3.794;DP=264;FS=0.648;HRun=0;HaplotypeScore=55.9425;InbreedingCoeff=0.4377;MQ=84.94;MQ0=2;MQRankSum=-2.684;QD=21.68;ReadPosRankSum=2.230;VQSLOD=3.2618;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,41:44:78.18:1460,78,0	0/0:1,0:1:2.97:0,3,20	0/0:24,0:18:39.93:0,40,544	0/0:21,0:15:18.71:0,19,291	0/0:6,0:6:17.86:0,18,197	0/0:15,0:15:42.06:0,42,551	0/0:19,0:20:56.53:0,57,878	1/1:7,0:7:15.24:105,15,0	0/0:4,0:4:11.98:0,12,187	0/0:6,0:6:15.02:0,15,186	0/0:8,0:9:15:0,15,182	0/0:4,0:5:11.99:0,12,151	0/0:5,0:5:15.04:0,15,221	0/0:6,0:6:8.95:0,9,88	0/0:7,0:9:20.94:0,21,321	0/0:4,0:4:12:0,12,196	0/0:16,0:17:27.05:0,27,531	0/1:8,0:11:40.01:40,0,80	0/0:3,0:3:9.01:0,9,108	0/0:7,0:8:11.70:0,12,133	0/0:7,0:7:14.98:0,15,150	0/0:6,0:6:12.34:0,12,87	0/0:5,0:5:5.94:0,6,67	0/0:5,0:5:8.11:0,8,166	0/0:1,0:1:3:0,3,26	0/1:1,0:4:3.90:16,0,4	0/0:6,0:6:17.99:0,18,186	0/1:3,0:3:8.25:13,0,8
chr10	99142261	.	GT	G	2125.27	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.173;DP=595;FS=0.000;HRun=2;HaplotypeScore=62.2456;InbreedingCoeff=0.9982;MQ=83.61;MQ0=0;MQRankSum=-4.382;QD=29.93;ReadPosRankSum=2.016;VQSLOD=3.2100;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:44:99:1380,108,0	0/0:9,0:9:27.09:0,27,404	0/0:17,0:17:40.64:0,41,550	0/0:20,0:20:56.68:0,57,701	0/0:17,0:17:51.15:0,51,725	0/0:23,0:23:69.19:0,69,973	0/0:17,0:17:51.16:0,51,742	0/0:15,0:15:42.11:0,42,560	0/0:14,0:14:42.14:0,42,629	0/0:35,0:35:99:0,105,1545	0/0:18,0:18:54.18:0,54,808	0/0:21,0:21:63.21:0,63,944	0/0:17,0:17:45.15:0,45,674	0/0:17,0:17:51.17:0,51,756	0/0:17,0:17:51.17:0,51,764	0/0:16,0:16:48.16:0,48,718	0/0:38,0:38:99:0,114,1660	1/1:3,24:27:69.20:867,69,0	0/0:22,0:22:66.22:0,66,983	0/0:19,0:19:57.14:0,57,809	0/0:35,0:35:99:0,102,1506	0/0:20,0:20:57.19:0,57,841	0/0:18,0:18:54.18:0,54,807	0/0:32,0:32:96.29:0,96,1397	0/0:8,0:8:24.08:0,24,358	0/0:23,0:23:69.21:0,69,1012	0/0:25,0:25:75.25:0,75,1122	0/0:11,0:11:33.08:0,33,449
chr10	99142323	.	T	TA	1624.62	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.685;DP=521;FS=0.000;HRun=4;HaplotypeScore=51.6652;InbreedingCoeff=0.9733;MQ=59.33;MQ0=2;MQRankSum=-1.434;QD=30.65;ReadPosRankSum=0.933;VQSLOD=3.7123;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:57.19:763,57,0	0/0:9,0:9:21.06:0,21,238	0/0:11,0:8:18.05:0,18,196	0/0:12,0:11:14.54:0,15,215	0/0:21,0:21:60.14:0,60,661	0/0:16,0:16:48.14:0,48,545	0/0:11,0:11:30.07:0,30,330	0/0:26,0:26:63.18:0,63,714	0/0:13,0:13:33.09:0,33,374	0/0:30,0:30:78.21:0,78,876	0/0:20,0:20:57.16:0,57,644	0/0:16,0:16:45.11:0,45,500	0/0:14,0:14:39.09:0,39,430	0/0:13,0:13:33.08:0,33,365	0/0:14,0:14:42.12:0,42,475	0/0:22,0:22:66.19:0,66,748	0/0:37,0:37:99:0,105,1189	1/1:3,26:29:72.24:983,72,0	0/0:24,0:24:63.18:0,63,715	0/0:21,0:21:60.17:0,60,679	0/0:14,0:14:36.09:0,36,399	0/0:12,0:12:33.09:0,33,374	0/0:18,0:18:51.15:0,51,578	0/0:20,0:20:14.08:0,14,524	0/0:17,0:17:51.15:0,51,578	0/0:24,0:24:66.19:0,66,749	0/0:23,0:23:66.19:0,66,748	0/0:10,0:10:24.07:0,24,271
chr10	99142633	.	A	AG	2971.65	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-10.914;DP=726;FS=5.063;HRun=1;HaplotypeScore=69.2429;InbreedingCoeff=0.9993;MQ=74.64;MQ0=0;MQRankSum=-5.824;QD=35.38;ReadPosRankSum=1.790;VQSLOD=3.7936;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,51:55:99:2015,135,0	0/0:10,0:10:27.09:0,27,350	0/0:32,0:32:93.26:0,93,1154	0/0:25,0:25:69.20:0,69,851	0/0:19,0:19:57.16:0,57,711	0/0:17,0:17:48.14:0,48,608	0/0:20,0:20:60.18:0,60,765	0/0:27,0:27:75.24:0,75,963	0/0:15,0:15:45.15:0,45,584	0/0:26,0:26:75.24:0,75,958	0/0:14,0:14:39.13:0,39,506	0/0:26,0:26:78.25:0,78,1000	0/0:22,0:22:63.20:0,63,818	0/0:30,0:30:90.28:0,90,1155	0/0:34,0:34:99:0,102,1271	0/0:25,0:25:69.22:0,69,885	0/0:25,0:25:72.22:0,72,919	1/1:1,28:29:72.24:1078,72,0	0/0:22,0:22:60.19:0,60,766	0/0:24,0:24:69.22:0,69,895	0/0:77,0:77:99:0,226,2877	0/0:25,0:25:75.21:0,75,944	0/0:23,0:23:66.20:0,66,842	0/0:28,0:28:81.26:0,81,1052	0/0:19,0:19:57.19:0,57,740	0/0:28,0:28:84.25:0,84,1054	0/0:18,0:18:54.18:0,54,701	0/0:11,0:11:33.11:0,33,428
chr10	99143017	.	TATACAC	T	255.14	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.493;DP=883;FS=1.391;HRun=0;HaplotypeScore=187.7429;InbreedingCoeff=0.6408;MQ=62.22;MQ0=0;MQRankSum=-4.665;QD=21.26;ReadPosRankSum=-1.223;VQSLOD=3.2036;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,114,3754	0/0:14,0:14:33.11:0,33,1041	0/0:21,0:18:30.57:0,31,843	0/0:15,0:12:13.07:0,13,229	0/0:36,0:36:96.32:0,96,3147	0/0:31,0:31:78.27:0,78,2532	0/0:18,0:18:45.15:0,45,1343	0/0:58,0:58:99:0,117,3808	0/0:41,0:41:99:0,102,3367	0/0:52,0:52:99:0,132,4329	0/0:23,0:23:54.17:0,54,1656	0/0:41,0:41:99:0,105,3448	0/0:40,0:40:99:0,114,3764	0/0:21,0:21:57.20:0,57,1865	0/0:36,0:36:99:0,99,3148	0/0:31,0:31:87.30:0,87,2757	0/0:21,0:21:48.14:0,48,1444	1/1:3,8:11:0.10:330,0,0	0/0:21,0:21:39.86:0,40,1489	0/0:40,0:40:93.32:0,93,3040	0/0:38,0:38:81.20:0,81,2678	0/0:45,0:45:99:0,108,3486	0/0:33,0:33:87.30:0,87,2860	0/0:23,0:23:51.18:0,51,1647	0/0:22,0:22:54.19:0,54,1799	0/0:38,0:38:93.32:0,93,3015	0/0:55,0:54:99:0,141,4549	0/0:12,0:14:35.98:0,36,1017
chr10	99143341	.	CTTTCTTT	C	317.32	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.554;DP=601;FS=6.627;HRun=0;HaplotypeScore=148.0137;InbreedingCoeff=0.9353;MQ=57.42;MQ0=7;MQRankSum=-3.535;QD=12.69;ReadPosRankSum=-1.738;VQSLOD=1.9866;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,18:25:24.14:411,24,0	0/0:10,0:10:28.29:0,28,481	0/0:25,0:10:19.10:0,19,349	0/0:26,0:9:10.61:0,11,169	0/0:22,0:22:54.71:0,55,1109	0/0:20,0:20:46:0,46,797	0/0:28,0:28:66.15:0,66,998	0/0:41,0:41:99:0,101,1438	0/0:16,0:16:29.88:0,30,482	0/0:26,0:25:69.95:0,70,961	0/0:21,0:20:57.03:0,57,820	0/0:10,0:10:24.03:0,24,374	0/0:21,0:21:33.28:0,33,507	0/0:23,0:23:50.10:0,50,669	0/0:20,0:19:48.56:0,49,798	0/0:28,0:28:66.14:0,66,1546	0/0:21,0:21:42.43:0,42,745	0/0:16,0:17:17.61:0,18,739	0/0:18,0:17:41.96:0,42,644	0/0:27,0:26:66.09:0,66,1036	0/0:14,0:14:27.06:0,27,313	0/0:24,0:24:45.60:0,46,801	0/0:13,0:12:26.49:0,26,363	0/0:28,0:28:46.86:0,47,736	0/0:25,0:25:61.39:0,61,1043	0/0:23,0:23:60.16:0,60,1060	0/0:19,0:19:38.14:0,38,596	0/0:9,0:9:21.04:0,21,339
chr10	99143342	.	TTTC	T	324.78	PASS	AB=0.967;AC=10;AF=0.179;AN=56;BaseQRankSum=5.241;DP=597;FS=16.566;HRun=0;HaplotypeScore=104.5783;InbreedingCoeff=0.0139;MQ=57.29;MQ0=7;MQRankSum=-8.360;QD=1.97;ReadPosRankSum=-1.018;VQSLOD=1.0314;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:23.18:195,23,0	0/0:10,0:10:19.86:0,20,129	0/0:25,0:10:21.70:0,22,204	0/0:26,0:9:12.73:0,13,130	0/0:22,0:22:29.68:0,30,275	0/0:20,0:20:17.20:0,17,188	0/0:28,0:28:33.14:0,33,285	0/0:39,0:39:29.47:0,29,492	0/0:16,0:16:21.35:0,21,125	0/0:26,0:25:48.90:0,49,348	0/0:21,0:20:32.87:0,33,298	0/1:10,0:10:21.47:21,0,79	0/1:19,0:19:33.05:33,0,98	0/1:21,2:23:87.53:88,0,92	0/0:20,0:19:34.91:0,35,211	0/0:27,0:27:34.61:0,35,647	0/1:20,1:21:17.41:17,0,104	0/1:18,0:17:33.48:33,0,150	0/1:15,1:15:19.95:20,0,175	0/0:27,0:26:17.45:0,17,262	0/0:14,0:14:17.79:0,18,177	0/0:24,0:24:10.37:0,10,277	0/1:11,1:11:5.14:5,0,106	0/0:29,0:29:27.49:0,27,222	0/0:26,0:26:5.82:0,6,203	0/0:23,0:23:34.93:0,35,305	0/1:21,0:21:59.18:59,0,104	0/0:9,0:9:9.77:0,10,91
chr10	99143343	.	TTC	T	654.95	PASS	AB=0.937;AC=17;AF=0.304;AN=56;BaseQRankSum=5.648;DP=592;FS=41.519;HRun=0;HaplotypeScore=93.4937;InbreedingCoeff=-0.2511;MQ=57.19;MQ0=7;MQRankSum=-11.043;QD=2.08;ReadPosRankSum=-2.339;VQSLOD=-0.3499;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:24.86:173,25,0	0/0:10,0:10:17.38:0,17,116	0/0:25,0:10:20.38:0,20,183	0/0:26,0:9:12.07:0,12,120	0/0:22,0:22:6.84:0,7,172	0/1:17,3:20:17.84:18,0,109	0/0:27,1:28:8.35:0,8,201	0/1:35,2:37:45.65:46,0,366	0/1:15,0:15:7.04:7,0,59	0/0:26,0:25:20.31:0,20,274	0/0:20,1:20:15.91:0,16,230	0/1:10,0:10:15.43:15,0,67	0/1:11,8:19:59.98:76,0,60	0/1:22,1:23:60.25:149,0,60	0/1:19,0:18:9.01:9,0,124	0/0:27,0:27:34.67:0,35,489	0/1:20,1:21:36.70:71,0,37	0/1:18,0:17:29.26:72,0,29	0/1:16,0:15:29.32:29,0,122	0/1:26,1:26:2.73:3,0,197	0/0:15,0:15:24.90:0,25,183	0/1:21,2:23:0.72:1,0,216	0/1:12,0:11:25.85:26,0,69	0/0:28,0:28:18.22:0,18,166	0/0:26,0:26:14.93:0,15,173	0/0:22,1:23:3.42:0,3,238	0/1:17,4:21:56.22:101,0,56	0/1:8,1:9:14.83:15,0,46
chr10	99143345	.	CTT	C	3532.16	PASS	AB=0.744;AC=43;AF=0.768;AN=56;BaseQRankSum=-2.576;DP=589;FS=6.333;HRun=18;HaplotypeScore=86.0999;InbreedingCoeff=0.3911;MQ=55.98;MQ0=6;MQRankSum=2.034;QD=7.11;ReadPosRankSum=2.700;VQSLOD=0.0659;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:33.79:36,0,34	1/1:7,4:11:13.33:94,13,0	0/0:24,0:10:7.96:0,8,50	0/0:25,0:8:2.88:0,3,15	1/1:11,10:22:27.65:212,28,0	1/1:9,8:20:22.42:197,22,0	1/1:12,13:29:9.08:196,9,0	0/1:27,8:39:27.06:171,0,27	1/1:5,8:14:20.55:153,21,0	1/1:16,9:25:9.47:170,9,0	1/1:10,9:19:25.17:174,25,0	1/1:7,2:9:11.67:80,12,0	1/1:13,5:19:13.87:124,14,0	1/1:16,6:24:36.28:242,36,0	1/1:8,10:18:28.61:200,29,0	0/0:24,0:25:19.95:0,20,395	1/1:10,11:22:24.13:242,24,0	0/0:18,0:17:36.85:0,37,362	0/1:9,7:15:10.02:119,0,10	1/1:16,7:26:21.57:177,22,0	1/1:10,0:12:2.03:10,2,0	0/1:13,4:24:18.42:86,0,18	1/1:5,8:13:8.29:92,8,0	1/1:12,14:27:3.06:139,3,0	1/1:12,8:24:30.34:215,30,0	1/1:13,9:24:12.90:190,13,0	1/1:13,1:21:17.28:141,17,0	0/1:2,4:8:0.16:73,0,0
chr10	99143932	.	C	CT	1606.95	PASS	AB=0.545;AC=9;AF=0.161;AN=56;BaseQRankSum=12.364;DP=606;FS=1.538;HRun=0;HaplotypeScore=81.2742;InbreedingCoeff=0.8469;MQ=90.61;MQ0=0;MQRankSum=-11.493;QD=21.14;ReadPosRankSum=-1.410;VQSLOD=4.5109;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:32.61:575,33,0	0/0:15,0:15:39.13:0,39,540	0/0:34,0:36:54.57:0,55,1141	0/0:20,0:20:57.14:0,57,746	0/0:16,0:16:48.16:0,48,670	0/0:19,0:19:57.19:0,57,797	0/0:20,0:20:60.20:0,60,837	1/1:3,19:22:50.97:605,51,0	0/0:17,0:17:51.16:0,51,696	0/0:17,0:17:48.16:0,48,671	0/0:13,0:13:39.13:0,39,545	0/0:24,0:24:72.24:0,72,1006	0/0:19,0:19:54.18:0,54,753	0/0:16,0:16:48.16:0,48,671	0/0:31,0:31:90.29:0,90,1241	0/0:22,0:22:63.21:0,63,880	0/0:33,0:33:99:0,99,1385	1/1:0,12:14:29.30:293,29,0	0/0:28,0:28:84.25:0,84,1138	0/0:24,0:24:69.23:0,69,963	0/0:40,0:40:99:0,114,1576	0/0:32,0:32:93.31:0,93,1300	0/0:18,0:18:51.17:0,51,707	0/0:29,0:29:87.29:0,87,1213	0/0:14,0:14:39.13:0,39,545	0/1:2,10:12:11.88:237,0,12	0/0:27,0:27:81.25:0,81,1114	1/1:0,2:2:6.01:56,6,0
chr10	99143933	.	A	AGGAT	5190.48	PASS	AB=0.545;AC=9;AF=0.161;AN=56;BaseQRankSum=12.564;DP=620;FS=5.444;HRun=0;HaplotypeScore=113.9625;InbreedingCoeff=0.8592;MQ=89.75;MQ0=0;MQRankSum=-13.447;QD=61.06;ReadPosRankSum=-2.719;VQSLOD=5.6705;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:30:90.22:1846,90,0	0/0:14,0:14:39.13:0,39,773	0/0:36,0:36:75.23:0,75,1819	0/0:20,0:20:54.16:0,54,1054	0/0:16,0:16:48.16:0,48,1006	0/0:19,0:19:57.20:0,57,1195	0/0:20,0:20:60.21:0,60,1229	1/1:5,19:24:66.20:1479,66,0	0/0:17,0:17:51.18:0,51,1052	0/0:17,0:17:48.16:0,48,995	0/0:13,0:13:39.13:0,39,814	0/0:25,0:25:72.25:0,72,1496	0/0:19,0:19:57.18:0,57,1129	0/0:17,0:17:48.16:0,48,993	0/0:31,0:31:93.31:0,93,1884	0/0:23,0:23:66.21:0,66,1320	0/0:33,0:33:99:0,99,2072	1/1:3,12:15:45.15:968,45,0	0/0:28,0:28:84.27:0,84,1676	0/0:24,0:24:72.23:0,72,1430	0/0:41,0:41:99:0,120,2424	0/0:32,0:32:96.32:0,96,1962	0/0:18,0:18:50.70:0,51,1064	0/0:30,0:30:87.30:0,87,1801	0/0:16,0:16:45.10:0,45,850	0/1:2,9:12:29.82:626,0,30	0/0:26,0:26:78.27:0,78,1621	1/1:2,2:4:12.04:272,12,0
chr10	99145068	.	CACTGTG	C	2748.76	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.626;DP=689;FS=13.224;HRun=0;HaplotypeScore=145.7722;InbreedingCoeff=0.9997;MQ=82.67;MQ0=0;MQRankSum=-10.436;QD=49.98;ReadPosRankSum=1.817;VQSLOD=3.3285;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,32:37:72.24:1763,72,0	0/0:15,0:15:45.15:0,45,1642	0/0:18,0:18:51.17:0,51,1640	0/0:25,0:25:75.23:0,75,2343	0/0:26,0:26:78.27:0,78,2736	0/0:19,0:19:57.20:0,57,2018	0/0:30,0:30:90.31:0,90,3208	0/0:22,0:22:63.21:0,63,2182	0/0:25,0:25:75.26:0,75,2703	0/0:31,0:31:93.32:0,93,3388	0/0:18,0:18:54.19:0,54,1940	0/0:37,0:37:99:0,111,4009	0/0:23,0:23:69.24:0,69,2464	0/0:23,0:23:66.23:0,66,2365	0/0:25,0:25:72.23:0,72,2511	0/0:30,0:30:90.31:0,90,3258	0/0:41,0:41:99:0,123,4329	1/1:2,16:18:45.15:1107,45,0	0/0:25,0:25:75.26:0,75,2672	0/0:25,0:25:75.24:0,75,2632	0/0:40,0:40:99:0,114,4029	0/0:31,0:31:93.31:0,93,3190	0/0:14,0:14:42.14:0,42,1539	0/0:17,0:17:51.18:0,51,1780	0/0:21,0:21:63.22:0,63,2244	0/0:16,0:16:42.14:0,42,1539	0/0:27,0:27:81.28:0,81,2875	0/0:10,0:10:30.10:0,30,1035
chr10	99152165	.	CGGTCTG	C	406.05	PASS	AB=0.770;AC=3;AF=0.054;AN=56;BaseQRankSum=3.508;DP=678;FS=21.243;HRun=0;HaplotypeScore=109.2678;InbreedingCoeff=-0.0655;MQ=41.67;MQ0=151;MQRankSum=-4.503;QD=16.24;ReadPosRankSum=0.353;VQSLOD=1.6492;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:6,1:4:56.46:56,0,299	0/0:7,0:7:14.66:0,15,473	0/0:32,0:6:18.06:0,18,554	0/0:38,0:15:45.15:0,45,1302	0/0:12,0:11:33.11:0,33,1147	0/0:20,0:17:45.15:0,45,1511	0/0:36,0:33:99:0,99,3227	0/0:42,0:6:12.04:0,12,346	0/0:23,1:21:48.16:0,48,1612	0/0:28,0:24:66.23:0,66,2237	0/0:16,0:15:45.15:0,45,1535	0/0:18,0:17:51.13:0,51,1625	0/0:13,0:13:35.80:0,36,1240	0/0:20,0:20:57.20:0,57,1970	0/0:21,0:21:60.16:0,60,1971	0/0:20,0:19:54.14:0,54,1777	0/0:40,0:39:96.26:0,96,3108	0/0:1,0:1:3.01:0,3,91	0/0:75,0:17:48.15:0,48,1546	0/0:20,0:18:51.18:0,51,1755	0/0:61,0:55:99:0,154,5110	0/0:18,0:16:45.15:0,45,1564	0/0:14,0:13:36.09:0,36,1138	0/0:37,0:35:99:0,99,3449	0/0:21,0:18:51.18:0,51,1774	0/1:6,8:10:99:387,0,185	0/0:19,0:17:51.18:0,51,1746	0/1:3,1:3:62.50:63,0,98
chr10	99152284	.	T	TGTGGGCAGAG	2162.32	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=2.611;DP=548;FS=22.826;HRun=0;HaplotypeScore=124.8644;InbreedingCoeff=0.8905;MQ=46.34;MQ0=126;MQRankSum=-6.565;QD=35.45;ReadPosRankSum=-2.560;VQSLOD=1.4475;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:9:9:289,9,0	0/0:5,0:3:6.02:0,6,191	0/0:12,0:5:12.04:0,12,332	0/0:13,0:7:8.21:0,8,286	0/0:26,0:21:48.15:0,48,1393	0/0:22,0:15:33.11:0,33,1023	0/0:26,0:22:57.17:0,57,1281	1/1:23,0:11:24:522,24,0	0/0:22,0:21:30.37:0,30,1464	0/0:25,0:11:27.09:0,27,851	0/0:11,0:9:21.04:0,21,467	0/0:26,0:20:48.14:0,48,1390	0/0:14,0:12:33.11:0,33,1039	0/0:19,0:16:39.13:0,39,1195	0/0:16,0:12:30.10:0,30,953	0/0:12,0:9:18.06:0,18,572	0/0:24,0:24:48.14:0,48,1386	1/1:1,0:3:6.02:269,6,0	0/0:52,0:15:39.09:0,39,916	0/0:8,0:7:18.06:0,18,512	0/0:65,0:61:99:0,153,4414	0/0:14,0:11:27.09:0,27,843	0/0:11,0:9:24.08:0,24,759	0/0:27,0:25:53.92:0,54,1538	0/0:17,0:13:30.57:0,31,907	1/1:7,8:9:15.05:776,15,0	0/0:20,0:12:36.09:0,36,986	1/1:1,3:6:9.03:465,9,0
chr10	99152492	.	A	AT	610.80	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.284;DP=407;FS=9.225;HRun=7;HaplotypeScore=47.3407;InbreedingCoeff=0.7798;MQ=72.81;MQ0=0;MQRankSum=0.313;QD=19.09;ReadPosRankSum=-0.093;VQSLOD=2.3266;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:51.16:616,51,0	0/0:9,0:9:27.04:0,27,260	0/0:15,0:14:6.28:0,6,177	0/0:8,0:8:5.91:0,6,58	0/0:11,0:11:27.02:0,27,255	0/0:18,0:18:39.05:0,39,377	0/0:17,0:17:42.06:0,42,406	0/0:28,0:28:69.10:0,69,666	0/0:12,0:12:33.05:0,33,319	0/0:15,0:15:30.04:0,30,290	0/0:12,0:12:36.06:0,36,347	0/0:11,0:11:30.05:0,30,290	0/0:9,0:9:24.02:0,24,226	0/0:11,0:11:30.04:0,30,289	0/0:21,0:21:54.06:0,54,516	0/0:16,0:15:41.91:0,42,396	0/0:29,0:29:84.14:0,84,811	1/1:9,0:9:11.86:111,12,0	0/0:18,0:18:36.04:0,36,344	0/0:21,0:21:63.08:0,63,597	0/0:4,0:4:12.02:0,12,116	0/0:2,0:2:3:0,3,29	0/0:12,0:12:27.02:0,27,260	0/0:21,0:21:60.09:0,60,579	0/0:18,0:18:48.07:0,48,463	0/0:19,0:19:51.08:0,51,493	0/0:11,0:11:27.02:0,27,255	0/0:6,0:6:9.01:0,9,87
chr10	99152698	.	CTT	C	811.64	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.979;DP=506;FS=5.122;HRun=12;HaplotypeScore=66.2954;InbreedingCoeff=0.8691;MQ=73.60;MQ0=2;MQRankSum=-0.899;QD=18.88;ReadPosRankSum=2.478;VQSLOD=2.9219;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:23.05:597,23,0	0/0:7,0:7:21.07:0,21,309	0/0:12,0:9:15.03:0,15,178	0/0:15,1:15:9.37:0,9,184	0/0:27,0:34:78.43:0,78,977	0/0:17,0:19:50.64:0,51,689	0/0:15,0:17:44.62:0,45,604	0/0:39,1:42:53.21:0,53,1068	0/0:13,0:14:11.19:0,11,514	0/0:13,0:13:30.08:0,30,411	0/0:11,0:13:29.06:0,29,357	0/0:13,0:14:38.59:0,39,493	0/0:13,0:13:36.11:0,36,518	0/0:14,0:15:39.10:0,39,544	0/0:20,0:23:61.65:0,62,796	0/0:23,0:25:61.11:0,61,862	0/0:11,0:12:5.68:0,6,446	1/1:3,13:16:33.05:336,33,0	0/0:23,0:24:48.16:0,48,694	0/0:14,0:19:47.62:0,48,613	0/0:8,0:10:25.19:0,25,330	0/0:19,0:21:44.62:0,45,598	0/0:11,0:12:29.58:0,30,394	0/0:16,0:16:39.13:0,39,576	0/0:14,1:17:11.08:0,11,462	0/0:21,0:22:50.65:0,51,705	0/0:18,0:20:53.13:0,53,710	0/0:9,0:11:14.36:0,14,190
chr10	99153162	.	AG	A	646.43	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.566;DP=636;FS=7.047;HRun=9;HaplotypeScore=67.2780;InbreedingCoeff=0.9170;MQ=74.07;MQ0=0;MQRankSum=-0.059;QD=19.01;ReadPosRankSum=0.693;VQSLOD=4.0128;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:34:81.04:741,81,0	0/0:7,0:7:18.05:0,18,208	0/0:27,0:27:49.85:0,50,535	0/0:9,2:10:8.59:0,9,125	0/0:20,0:20:45.10:0,45,487	0/0:23,0:23:60.18:0,60,691	0/0:24,0:24:57.14:0,57,639	0/0:29,0:29:51.08:0,51,545	0/0:29,0:29:81.24:0,81,935	0/0:20,0:20:54.16:0,54,623	0/0:14,0:14:42.12:0,42,484	0/0:17,0:17:48.14:0,48,554	0/0:21,0:21:54.14:0,54,603	0/0:28,0:28:78.20:0,78,878	0/0:23,0:23:57.13:0,57,643	0/0:26,0:26:69.21:0,69,796	0/0:40,0:40:99:0,111,1236	0/0:2,0:20:45.59:0,46,237	0/0:24,2:26:15.64:0,16,631	0/0:22,0:22:60.17:0,60,682	0/0:40,0:40:99:0,99,1110	0/0:27,0:27:69.19:0,69,779	0/0:10,0:10:27.05:0,27,299	0/0:20,0:20:60.18:0,60,692	0/0:22,0:22:57.14:0,57,638	0/0:20,0:20:42.12:0,42,484	0/0:27,0:26:72.20:0,72,820	0/0:9,0:9:21.06:0,21,242
chr10	99155721	.	TATC	T	1068.04	PASS	AB=0.988;AC=13;AF=0.232;AN=56;BaseQRankSum=10.147;DP=671;FS=50.094;HRun=0;HaplotypeScore=317.1982;InbreedingCoeff=-0.2062;MQ=37.35;MQ0=0;MQRankSum=-6.306;QD=3.00;ReadPosRankSum=2.135;VQSLOD=0.8159;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:36:0.88:1,0,399	0/1:12,0:12:82.36:82,0,196	0/0:19,0:10:36.51:0,37,792	0/0:16,0:9:33.45:0,33,691	0/0:37,0:37:13.23:0,13,816	0/0:28,0:28:58.74:0,59,728	0/0:15,0:15:19.46:0,19,445	0/1:41,0:39:53.10:53,0,1004	0/1:16,0:16:3.81:4,0,472	0/1:54,0:54:80.09:80,0,1249	0/1:26,0:26:70.07:70,0,593	0/0:12,0:12:24.14:0,24,424	0/0:18,0:18:28.45:0,28,518	0/0:18,0:18:0.29:0,0,736	0/0:24,0:24:53.74:0,54,942	0/0:20,0:20:0.87:0,1,498	0/0:12,0:12:26.44:0,26,655	1/1:1,0:1:0.89:2,1,0	0/0:17,0:15:36.04:0,36,676	0/1:28,1:29:99:244,0,448	0/0:28,0:27:30.85:0,31,686	0/1:29,0:28:99:171,0,619	0/0:26,1:27:6.89:0,7,854	0/0:19,0:19:26.09:0,26,658	0/1:33,1:34:99:306,0,349	0/1:62,3:63:99:150,0,1854	0/0:5,0:5:14.45:0,14,238	0/1:13,0:13:41.94:42,0,266
chr10	99155723	.	T	TG	5945.07	PASS	AB=0.724;AC=22;AF=0.393;AN=56;BaseQRankSum=7.915;DP=672;FS=61.387;HRun=0;HaplotypeScore=287.9237;InbreedingCoeff=-0.6359;MQ=37.74;MQ0=0;MQRankSum=-8.698;QD=10.39;ReadPosRankSum=0.205;VQSLOD=3.1125;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,13:35:99:267,0,179	0/1:8,4:12:99:160,0,113	0/0:22,0:12:35.84:0,36,448	0/0:17,0:9:32.12:0,32,396	0/1:23,14:37:99:163,0,429	0/1:13,14:27:99:400,0,269	0/1:10,4:14:9.71:10,0,229	0/1:30,9:40:99:239,0,520	0/1:13,3:16:51.05:51,0,274	0/1:22,31:53:99:1200,0,454	0/1:13,12:25:99:131,0,330	0/1:8,6:13:99:129,0,179	0/1:9,8:18:99:329,0,227	0/1:13,4:17:2.39:2,0,433	0/1:15,10:25:99:150,0,448	0/1:12,8:20:99:151,0,221	0/0:13,1:14:29.45:0,29,397	0/0:1,0:1:2.22:0,2,7	0/1:13,4:15:53.98:54,0,344	0/1:14,14:28:99:466,0,255	0/0:22,6:27:30.86:0,31,400	0/1:15,15:30:99:278,0,407	0/1:16,10:26:99:171,0,419	0/0:13,5:18:30.27:0,30,398	0/1:19,14:34:99:398,0,239	0/1:37,26:62:99:959,0,726	0/1:3,2:5:69.06:69,0,110	0/1:7,5:12:99:169,0,143
chr10	99155724	.	CGCA	C	2108	PASS	AB=0.924;AC=18;AF=0.321;AN=56;BaseQRankSum=10.240;DP=707;FS=76.103;HRun=0;HaplotypeScore=325.9991;InbreedingCoeff=-0.3092;MQ=37.59;MQ0=0;MQRankSum=-5.738;QD=4.29;ReadPosRankSum=3.159;VQSLOD=-0.3972;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,1:35:7.18:7,0,368	0/1:9,4:13:99:164,0,230	0/0:23,0:13:39.51:0,40,844	0/0:19,0:11:36.38:0,36,744	0/1:36,2:39:4.51:5,0,910	0/0:27,0:27:41.51:0,42,800	0/1:15,0:15:3.27:3,0,373	0/1:46,0:45:99:148,0,1303	0/1:16,0:16:4.06:4,0,546	0/1:54,5:59:99:267,0,1674	0/1:26,2:28:99:107,0,687	0/0:14,0:13:19.46:0,19,435	0/0:18,0:18:19.74:0,20,618	0/1:17,1:18:14.65:15,0,810	0/0:25,0:25:52.83:0,53,1115	0/1:20,0:20:23.64:24,0,475	0/0:14,0:14:32.39:0,32,792	1/1:1,0:1:2.99:23,3,0	0/0:20,1:19:45:0,45,879	0/1:24,6:30:99:374,0,737	0/0:29,0:28:33.26:0,33,814	0/1:26,5:30:99:307,0,818	0/1:27,1:28:25.80:26,0,893	0/0:20,0:20:32.32:0,32,803	0/1:28,7:35:99:508,0,594	0/1:59,4:62:99:178,0,2087	0/0:6,0:6:17.64:0,18,294	0/1:10,2:12:99:106,0,260
chr10	99155725	.	GCA	G	109.90	PASS	AB=0.988;AC=7;AF=0.125;AN=56;BaseQRankSum=10.698;DP=727;FS=63.087;HRun=0;HaplotypeScore=332.4735;InbreedingCoeff=0.0353;MQ=37.82;MQ0=0;MQRankSum=-7.266;QD=0.90;ReadPosRankSum=2.908;VQSLOD=0.2314;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:35:12.57:0,13,292	0/1:13,0:13:33.09:33,0,128	0/0:24,0:14:37.91:0,38,696	0/0:21,0:12:32.89:0,33,600	0/0:38,1:39:29.96:0,30,715	0/0:27,0:27:39.23:0,39,611	0/0:17,0:17:22.78:0,23,371	0/0:47,3:48:15.46:0,15,1165	0/0:16,0:16:10.93:0,11,433	0/0:58,0:59:36.63:0,37,1257	0/0:29,0:29:17.12:0,17,572	0/0:14,0:13:19.59:0,20,336	0/0:18,0:18:30.22:0,30,489	0/0:18,0:18:27.14:0,27,682	0/0:26,0:26:53.92:0,54,901	0/0:21,0:21:9.88:0,10,433	0/0:15,0:15:36.04:0,36,667	1/1:1,0:1:1.55:4,2,0	0/0:22,0:20:48.11:0,48,785	0/1:30,0:30:29.19:29,0,507	0/0:31,0:30:35.11:0,35,663	0/1:30,1:30:28.18:28,0,595	0/0:28,0:28:26.21:0,26,728	0/0:23,0:23:35.31:0,35,675	0/1:34,1:35:99:124,0,355	0/0:66,0:64:25.94:0,26,1629	0/0:6,0:6:17.78:0,18,239	0/1:12,0:12:8.79:9,0,192
chr10	99155726	.	CA	C	588.11	PASS	AB=0.923;AC=13;AF=0.232;AN=56;BaseQRankSum=11.421;DP=748;FS=102.193;HRun=1;HaplotypeScore=330.9610;InbreedingCoeff=-0.1456;MQ=37.84;MQ0=2;MQRankSum=-7.416;QD=1.62;ReadPosRankSum=2.063;VQSLOD=-0.5265;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,1:35:19.34:0,19,271	0/1:14,1:15:31.02:31,0,149	0/0:25,0:14:39:0,39,567	0/0:22,0:13:39.93:0,40,558	0/0:39,0:39:36.79:0,37,625	0/0:28,0:28:50.73:0,51,585	0/1:15,2:17:34.52:35,0,291	0/1:43,9:50:99:297,0,1065	0/1:15,2:17:3.71:4,0,352	0/1:58,1:59:7.76:8,0,1360	0/0:29,1:30:10.37:0,10,505	0/0:14,0:13:23.43:0,23,298	0/0:19,0:19:46.27:0,46,486	0/0:19,0:19:26.94:0,27,547	0/0:27,0:27:52.84:0,53,794	0/1:18,3:21:35.03:35,0,378	0/0:15,0:15:35.45:0,35,568	1/1:0,1:1:3.01:40,3,0	0/0:23,1:21:51.13:0,51,740	0/1:29,1:30:46.32:46,0,526	0/0:31,0:30:33.95:0,34,572	0/1:33,0:32:4.66:5,0,577	0/0:26,2:28:3.79:0,4,603	0/0:23,0:23:35.50:0,36,572	0/1:32,4:36:99:118,0,396	0/1:65,2:65:88.61:89,0,1555	0/0:7,0:7:17.77:0,18,212	0/1:12,2:14:28.59:29,0,183
chr10	99155780	.	C	CCTGT	4958.49	PASS	AB=0.968;AC=20;AF=0.357;AN=56;BaseQRankSum=6.020;DP=1272;FS=51.716;HRun=0;HaplotypeScore=589.3816;InbreedingCoeff=0.0565;MQ=45.94;MQ0=5;MQRankSum=-10.416;QD=6.82;ReadPosRankSum=2.580;VQSLOD=0.3309;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,34:59:76.98:1920,77,0	0/1:28,0:29:53.98:54,0,426	0/0:60,0:51:12.09:0,12,524	0/1:63,0:49:23.84:24,0,313	0/0:56,0:58:61.35:0,61,951	0/0:39,0:39:30.47:0,30,667	0/0:32,0:32:59.38:0,59,893	1/1:76,3:75:21.05:371,21,0	0/1:32,0:32:32.97:33,0,613	0/1:83,0:83:99:184,0,1075	0/0:46,0:47:32.78:0,33,500	0/1:26,0:25:13.44:13,0,607	0/0:32,0:32:16.04:0,16,929	0/1:25,0:25:0.74:1,0,563	0/1:51,0:51:31.29:31,0,1018	0/0:38,0:38:49.03:0,49,922	0/0:32,0:32:27.61:0,28,848	1/1:2,0:3:3.01:57,3,0	0/1:47,0:43:17.25:17,0,376	0/1:55,0:58:71.87:72,0,653	0/0:60,0:58:91.26:0,91,1407	0/0:46,0:48:20.35:0,20,573	0/0:52,0:54:50.50:0,51,796	0/0:44,0:43:72.05:0,72,1151	0/1:59,0:62:42.21:42,0,640	0/1:47,21:68:23.90:1588,0,24	0/1:18,0:18:28.06:28,0,365	1/1:15,6:21:21.93:522,22,0
chr10	99155801	.	C	CTG	1863.42	PASS	AB=0.968;AC=15;AF=0.268;AN=56;BaseQRankSum=17.260;DP=1090;FS=55.017;HRun=0;HaplotypeScore=499.9247;InbreedingCoeff=-0.1782;MQ=52.93;MQ0=4;MQRankSum=-13.930;QD=3.24;ReadPosRankSum=-3.023;VQSLOD=-0.5678;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:62,0:61:48.88:392,0,49	0/1:22,1:23:99:163,0,514	0/0:48,1:41:53.29:0,53,1412	0/1:53,2:42:24.85:25,0,992	0/0:42,2:44:60.01:0,60,958	0/0:37,0:38:37.81:0,38,987	0/0:40,0:40:83.49:0,83,1226	0/1:37,0:35:9.94:10,0,790	0/1:33,0:34:3.40:3,0,708	0/1:58,4:63:99:448,0,1305	0/0:28,5:33:33.03:0,33,504	0/0:27,0:26:17:0,17,738	0/1:34,0:35:31.52:32,0,950	0/0:27,0:27:19.19:0,19,627	0/1:52,0:49:20.81:21,0,1046	0/0:35,0:38:19.36:0,19,985	0/0:32,0:32:62.66:0,63,1036	0/0:5,0:5:3.51:0,4,45	0/1:25,0:25:10.68:11,0,813	0/1:39,6:45:82.81:83,0,756	0/0:53,0:52:99:0,104,1577	0/0:35,2:37:20.47:0,20,578	0/0:41,3:44:51.02:0,51,826	0/0:46,0:45:89.25:0,89,1334	0/1:54,2:56:99:100,0,738	0/1:53,1:55:99:450,0,629	0/1:19,0:19:26.60:27,0,378	1/1:12,1:14:30.80:260,31,0
chr10	99155841	.	TCCCTGA	T	71.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.974;DP=709;FS=20.551;HRun=0;HaplotypeScore=253.1062;InbreedingCoeff=0.9283;MQ=68.41;MQ0=1;MQRankSum=-3.063;QD=23.94;ReadPosRankSum=-0.744;VQSLOD=1.7635;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,1:44:99:0,101,3538	0/0:12,1:13:29.11:0,29,905	0/0:37,0:33:55.93:0,56,2818	0/0:44,0:39:77.85:0,78,2421	0/0:21,3:24:50.18:0,50,1745	0/0:30,2:33:75.33:0,75,2730	0/0:33,0:33:99:0,99,3427	0/0:45,0:45:99:0,126,4211	0/0:26,0:26:66.14:0,66,2118	0/0:30,1:31:85.66:0,86,3063	0/0:17,0:17:35.70:0,36,1246	0/0:21,0:21:63.22:0,63,2222	0/0:23,1:24:49.72:0,50,2269	0/0:12,1:13:33.10:0,33,1184	0/0:32,3:33:72.90:0,73,2980	0/0:24,0:24:66.23:0,66,2336	0/0:24,0:23:63.09:0,63,2106	1/1:1,2:3:9.03:155,9,0	0/0:17,0:17:51.17:0,51,1673	0/0:27,1:28:72.06:0,72,2452	0/0:36,0:36:69.01:0,69,2888	0/0:19,1:20:45.41:0,45,1504	0/0:15,1:16:39.94:0,40,1404	0/0:33,0:34:35.82:0,36,2153	0/0:18,3:22:43.25:0,43,1691	0/0:22,0:23:54.32:0,54,2307	0/0:14,0:14:24.99:0,25,1337	0/0:6,0:6:18.01:0,18,484
chr10	99155906	.	CTCTCTCTCTCTGTG	C	3789.32	PASS	AB=0.989;AC=25;AF=0.446;AN=56;BaseQRankSum=-10.482;DP=713;FS=4.764;HRun=0;HaplotypeScore=335.0835;InbreedingCoeff=-0.4415;MQ=45.10;MQ0=26;MQRankSum=1.420;QD=7.10;ReadPosRankSum=-5.962;VQSLOD=0.4837;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:35:54.07:54,0,110	0/1:8,1:9:43.76:231,0,44	0/0:29,0:4:4.94:0,5,22	0/0:55,0:13:8.59:0,9,123	0/0:22,0:22:7.81:0,8,59	0/1:24,0:22:14.85:15,0,130	0/1:28,0:26:82.22:82,0,128	0/1:28,0:25:87.74:382,0,88	0/0:26,0:25:15.02:0,15,204	0/1:34,0:34:97.49:97,0,422	0/1:21,0:20:5.17:5,0,116	0/1:21,0:20:75.42:75,0,82	0/1:16,0:16:8.63:9,0,221	0/1:18,0:18:30.12:30,0,43	1/1:33,0:31:35.62:585,36,0	0/1:23,0:23:99:103,0,909	0/1:26,0:26:61.73:62,0,173	0/1:10,0:9:14.62:90,0,15	0/0:14,0:11:12.67:0,13,156	0/1:33,0:33:71.97:82,0,72	0/1:32,0:31:13.32:90,0,13	0/0:32,0:31:1.49:0,1,52	1/1:21,0:19:1.56:49,2,0	0/1:26,0:25:67.91:81,0,68	0/1:23,0:23:54.60:70,0,55	0/1:31,4:34:99:1184,0,148	0/1:23,0:23:44.35:44,0,197	1/1:12,2:14:14.13:368,14,0
chr10	99155908	.	CTCTCTCTCTGTG	C	5123.52	PASS	AB=0.995;AC=32;AF=0.571;AN=56;BaseQRankSum=-10.156;DP=710;FS=1.552;HRun=0;HaplotypeScore=318.2109;InbreedingCoeff=-0.6075;MQ=44.56;MQ0=25;MQRankSum=3.717;QD=7.50;ReadPosRankSum=-5.855;VQSLOD=2.2724;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:34:1.22:128,0,1	0/1:8,1:9:38.28:246,0,38	0/1:29,0:5:9.36:71,0,9	0/1:51,0:13:48.78:49,0,71	0/1:23,0:23:3.91:63,0,4	0/1:25,0:23:31.37:89,0,31	0/1:29,0:27:37.94:176,0,38	0/1:29,0:26:99:368,0,109	0/0:27,0:26:12.18:0,12,110	0/1:33,0:33:99:152,0,319	0/1:21,0:20:53.64:54,0,54	0/1:21,0:20:11.50:154,0,11	0/1:18,0:18:99:265,0,107	0/1:18,0:18:11.94:73,0,12	1/1:25,8:31:41.70:905,42,0	0/1:22,0:22:99:133,0,598	0/1:26,0:26:95.55:174,0,96	0/1:9,0:9:58.70:113,0,59	0/1:14,0:11:34.18:34,0,61	1/1:33,0:33:3.36:163,3,0	1/1:30,0:29:6.25:100,6,0	0/1:33,0:32:32.39:32,0,39	1/1:21,0:19:1.61:49,2,0	0/1:26,0:25:15.57:116,0,16	0/1:25,0:25:40.35:139,0,40	0/1:34,0:33:99:883,0,257	0/1:22,0:22:71.49:93,0,71	1/1:14,0:14:15.05:303,15,0
chr10	99155912	.	CTCTCTGTG	C	8645.20	PASS	AB=0.983;AC=43;AF=0.768;AN=56;BaseQRankSum=-10.163;DP=692;FS=43.688;HRun=0;HaplotypeScore=274.1340;InbreedingCoeff=-0.3087;MQ=43.02;MQ0=18;MQRankSum=5.259;QD=12.49;ReadPosRankSum=0.592;VQSLOD=2.4668;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,3:32:29.67:352,30,0	0/1:9,0:9:37.48:169,0,37	0/1:25,0:4:7.97:71,0,8	0/1:48,0:10:87.87:88,0,106	1/1:24,0:24:12.25:189,12,0	1/1:23,1:22:26.58:326,27,0	1/1:28,0:26:27.11:553,27,0	0/1:25,0:24:99:403,0,160	0/1:26,3:28:37.83:63,0,38	0/1:31,1:32:99:536,0,193	0/1:19,0:19:16.81:176,0,17	1/1:17,3:19:25.97:328,26,0	1/1:18,1:19:36.25:614,36,0	1/1:20,0:20:30.54:415,31,0	1/1:30,0:29:47.55:752,48,0	0/1:23,0:23:99:232,0,318	1/1:25,1:26:20.11:384,20,0	0/1:9,0:9:10.09:153,0,10	1/1:15,0:12:29.08:357,29,0	0/1:33,1:34:7.82:316,0,8	1/1:25,0:25:10.28:152,10,0	0/1:32,1:32:44.69:58,0,45	1/1:19,0:19:1.45:92,1,0	1/1:24,2:26:23.52:343,24,0	0/1:25,1:26:61.42:139,0,61	0/1:33,0:32:99:625,0,241	1/1:22,0:22:37.62:463,38,0	1/1:15,0:15:18.06:296,18,0
chr10	99155914	.	CTCTGTG	C	10997.76	PASS	AB=0.895;AC=43;AF=0.768;AN=56;BaseQRankSum=-10.389;DP=684;FS=49.650;HRun=0;HaplotypeScore=253.8636;InbreedingCoeff=-0.2811;MQ=42.35;MQ0=17;MQRankSum=5.587;QD=16.08;ReadPosRankSum=1.777;VQSLOD=2.3543;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,7:32:29.26:501,29,0	0/1:9,0:9:18.41:142,0,18	0/1:22,0:3:7.18:72,0,7	0/1:44,0:10:87.87:88,0,120	1/1:18,6:24:12.31:214,12,0	1/1:20,5:23:29.12:494,29,0	1/1:21,8:27:38.40:752,38,0	0/1:25,0:24:99:515,0,134	0/1:8,21:28:29.99:197,0,30	0/1:28,4:32:99:750,0,108	0/1:13,7:20:9.87:240,0,10	1/1:15,5:19:29.30:596,29,0	1/1:11,9:20:39.41:885,39,0	1/1:12,9:21:33.58:586,34,0	1/1:30,0:29:43.34:681,43,0	0/1:23,0:23:99:327,0,174	1/1:23,2:25:31.95:516,32,0	1/1:8,1:9:20.77:224,21,0	1/1:12,3:12:29.31:493,29,0	0/1:28,5:33:9.11:359,0,9	1/1:21,3:24:10.85:154,11,0	0/1:27,5:31:45.62:98,0,46	0/1:15,4:19:0.04:90,0,0	1/1:23,3:26:26.74:416,27,0	0/1:23,4:27:63.17:139,0,63	0/1:31,0:30:99:511,0,171	1/1:16,6:22:38.92:690,39,0	1/1:15,0:15:18.06:268,18,0
chr10	99155916	.	CTGTG	C	10494.23	PASS	AB=0.965;AC=44;AF=0.786;AN=56;BaseQRankSum=-9.738;DP=675;FS=59.199;HRun=0;HaplotypeScore=243.6552;InbreedingCoeff=-0.2710;MQ=45.11;MQ0=16;MQRankSum=5.230;QD=15.55;ReadPosRankSum=2.289;VQSLOD=2.5344;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:31:30.07:434,30,0	0/1:8,0:8:26.59:112,0,27	0/1:18,3:4:27.03:69,0,27	0/1:39,6:13:87.40:87,0,103	1/1:23,2:26:16.07:316,16,0	1/1:24,0:22:31.84:451,32,0	1/1:28,0:27:49.98:753,50,0	0/1:25,0:24:99:557,0,146	0/1:27,0:26:20.16:100,0,20	0/1:27,0:28:99:626,0,142	0/1:20,0:20:7.77:192,0,8	1/1:19,1:19:28.58:457,29,0	1/1:20,0:20:39.41:725,39,0	1/1:21,0:21:34:500,34,0	1/1:30,0:30:41.35:652,41,0	0/1:23,0:23:29.97:379,0,30	1/1:27,1:28:41.18:634,41,0	1/1:6,3:9:21.07:352,21,0	1/1:14,0:11:29.13:403,29,0	0/1:33,0:33:6.01:334,0,6	1/1:22,1:23:12.01:176,12,0	0/1:32,0:32:44.31:108,0,44	1/1:17,1:19:6.47:144,6,0	1/1:25,0:26:29.93:417,30,0	0/1:26,0:26:56.27:137,0,56	0/1:28,4:31:99:630,0,204	1/1:20,0:20:26.23:511,26,0	1/1:13,1:14:18.06:240,18,0
chr10	99156518	.	G	GAGA	675.80	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.248;DP=737;FS=1.135;HRun=0;HaplotypeScore=109.5135;InbreedingCoeff=0.9978;MQ=71.74;MQ0=0;MQRankSum=-1.343;QD=32.18;ReadPosRankSum=1.889;VQSLOD=3.8272;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1648	0/0:8,0:8:24.08:0,24,396	0/0:25,0:24:53.10:0,53,808	0/0:18,0:18:48.46:0,48,721	0/0:27,0:27:72.25:0,72,1213	0/0:28,0:28:84.29:0,84,1410	0/0:24,0:24:72.23:0,72,1194	0/0:28,0:28:75.24:0,75,1207	0/0:24,0:24:72.21:0,72,1173	0/0:40,0:40:99:0,120,2007	0/0:22,0:22:63.21:0,63,1047	0/0:24,0:24:69.22:0,69,1150	0/0:16,0:16:48.15:0,48,787	0/0:23,0:23:63.20:0,63,1021	0/0:32,0:32:93.30:0,93,1522	0/0:29,0:29:84.25:0,84,1356	0/0:20,0:20:57.18:0,57,932	1/1:2,15:21:36.08:771,36,0	0/0:25,0:25:75.26:0,75,1277	0/0:24,0:24:63.21:0,63,1060	0/0:24,0:23:69.22:0,69,1144	0/0:33,0:33:96.28:0,96,1508	0/0:37,0:37:99:0,102,1531	0/0:30,0:30:81.22:0,81,1323	0/0:28,0:28:75.18:0,75,1153	0/0:42,0:42:99:0,117,1833	0/0:35,0:35:99:0,105,1733	0/0:16,0:16:48.15:0,48,779
chr10	99156873	.	T	TTAACCCAACCACCAAACAC	40460.43	PASS	AB=0.821;AC=54;AF=0.964;AN=56;BaseQRankSum=-5.302;DP=323;FS=12.936;HRun=0;HaplotypeScore=387.4190;InbreedingCoeff=-0.0558;MQ=67.22;MQ0=0;MQRankSum=0.931;QD=125.26;ReadPosRankSum=2.068;VQSLOD=3.6097;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:26.96:1739,27,0	1/1:5,0:5:14.08:902,14,0	1/1:6,0:10:3.27:1399,3,0	0/1:4,1:9:7.23:1370,0,7	1/1:12,0:12:9.40:1432,9,0	1/1:9,0:9:16.75:1476,17,0	1/1:8,0:8:18.06:899,18,0	1/1:8,0:7:24.08:1382,24,0	1/1:15,0:15:45.15:2456,45,0	1/1:11,0:11:27.05:1150,27,0	1/1:12,0:12:25.43:1033,25,0	1/1:18,0:18:40.29:2598,40,0	1/1:14,0:14:24.65:1196,25,0	1/1:10,0:10:12.24:1101,12,0	1/1:18,0:18:50.06:2273,50,0	1/1:13,0:13:32.67:1552,33,0	1/1:10,0:10:7.42:1319,7,0	1/1:6,0:6:5.39:673,5,0	1/1:10,0:10:24.08:1048,24,0	1/1:15,0:15:25.99:1803,26,0	1/1:8,0:8:14.99:419,15,0	1/1:12,0:12:28.64:1436,29,0	1/1:13,0:13:34.93:1832,35,0	0/1:11,0:11:23.22:941,0,23	1/1:24,0:24:52.88:3385,53,0	1/1:15,0:15:40.32:2195,40,0	1/1:11,0:11:15.07:1080,15,0	1/1:3,0:3:9.03:370,9,0
chr10	99156874	.	T	TAACCCAACCACCAA	1519.56	PASS	AB=0.733;AC=28;AF=0.933;AN=30;BaseQRankSum=-1.932;DP=36;FS=3.171;HRun=0;HaplotypeScore=20.3093;InbreedingCoeff=-0.2316;MQ=132.56;MQ0=0;MQRankSum=-1.514;QD=46.05;ReadPosRankSum=-1.097;VQSLOD=2.2639;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:3,1:6:8.77:471,0,9	0/1:3,0:4:22.28:204,0,22	./.	./.	1/1:1,0:1:3.01:51,3,0	1/1:1,0:1:3.01:50,3,0	./.	1/1:2,0:2:6.01:86,6,0	1/1:1,0:1:3.01:107,3,0	1/1:2,0:2:2.97:20,3,0	./.	./.	./.	1/1:1,0:2:3.01:120,3,0	1/1:1,0:1:3.01:36,3,0	./.	1/1:3,0:3:3.01:56,3,0	./.	1/1:4,0:5:9.02:187,9,0	1/1:1,0:1:3.01:38,3,0	1/1:1,0:2:6.02:90,6,0	1/1:1,0:1:3.01:71,3,0	./.	1/1:1,0:1:2.98:21,3,0	./.	./.
chr10	99156979	.	TATCCATCC	T	5278.15	PASS	AB=0.813;AC=39;AF=0.750;AN=52;BaseQRankSum=3.940;DP=475;FS=77.746;HRun=0;HaplotypeScore=126.0559;InbreedingCoeff=0.6906;MQ=53.28;MQ0=17;MQRankSum=-8.231;QD=19.40;ReadPosRankSum=-1.171;VQSLOD=0.4137;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:28:30.10:0,30,970	1/1:0,2:2:6.02:149,6,0	./.	./.	1/1:5,5:10:9.03:224,9,0	1/1:7,2:9:5.98:95,6,0	1/1:12,0:12:3.01:72,3,0	0/0:24,0:23:9.03:0,9,184	1/1:10,6:16:12.04:299,12,0	1/1:6,5:11:18.06:448,18,0	1/1:11,4:15:12:223,12,0	1/1:8,6:14:6.02:149,6,0	1/1:3,9:12:24.08:576,24,0	1/1:7,4:11:9.03:224,9,0	1/1:7,10:17:27.09:652,27,0	0/0:27,0:27:51.17:0,51,1782	0/1:10,3:13:48.16:69,0,48	0/0:16,0:16:39.09:0,39,1316	1/1:22,3:23:9.03:224,9,0	1/1:11,9:20:24:489,24,0	1/1:10,5:15:5.02:93,5,0	1/1:7,7:14:12:244,12,0	1/1:8,2:10:9.03:209,9,0	1/1:13,3:16:2.97:20,3,0	1/1:7,7:14:15.05:373,15,0	0/0:25,0:25:42.14:0,42,1718	1/1:9,7:16:18.06:448,18,0	0/0:4,0:12:27.09:0,27,942
chr10	99158621	.	G	GA	2647.02	PASS	AB=0.583;AC=9;AF=0.161;AN=56;BaseQRankSum=-11.388;DP=659;FS=1.336;HRun=10;HaplotypeScore=67.5104;InbreedingCoeff=0.8328;MQ=65.39;MQ0=3;MQRankSum=-0.110;QD=19.75;ReadPosRankSum=0.720;VQSLOD=4.4917;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,34:39:57.54:808,58,0	0/0:17,0:17:38.18:0,38,316	0/0:28,0:16:10.54:0,11,118	0/0:28,0:12:21.55:0,22,174	0/0:32,0:33:79.76:0,80,642	0/0:20,0:20:50.91:0,51,418	0/0:22,2:25:0.92:0,1,402	1/1:5,27:32:80.10:820,80,0	0/0:27,0:27:64.71:0,65,520	0/0:29,0:29:77.78:0,78,631	0/0:17,0:17:47.94:0,48,393	0/0:22,0:22:56.91:0,57,466	0/0:22,0:23:55.96:0,56,449	0/0:16,0:16:32.93:0,33,271	0/0:24,0:25:63.97:0,64,504	0/0:18,1:19:15.95:0,16,337	0/0:38,0:38:99:0,102,830	1/1:5,23:28:63.16:670,63,0	0/0:14,0:15:37.98:0,38,301	0/0:29,0:29:67.89:0,68,564	0/0:15,0:15:32.95:0,33,271	0/0:25,0:25:40.20:0,40,438	0/0:19,0:19:50.94:0,51,419	0/0:22,0:22:56.91:0,57,468	0/0:16,0:17:43.98:0,44,351	1/1:9,19:28:26.41:458,26,0	0/0:16,0:16:47.91:0,48,389	0/1:2,5:7:5.62:55,0,6
chr10	99158787	.	TG	T	2463.53	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=9.932;DP=679;FS=1.277;HRun=9;HaplotypeScore=67.0836;InbreedingCoeff=0.8865;MQ=75.26;MQ0=0;MQRankSum=-3.024;QD=18.95;ReadPosRankSum=-1.162;VQSLOD=3.6522;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,33:36:93.04:851,93,0	0/0:7,0:7:21.06:0,21,242	0/1:18,0:18:15.77:16,0,299	0/0:8,0:11:22.11:0,22,181	0/0:24,0:24:57.13:0,57,629	0/0:18,0:18:48.14:0,48,554	0/0:35,1:36:56.79:0,57,907	1/1:1,28:29:80.98:732,81,0	0/0:25,1:27:35.71:0,36,655	0/0:25,0:25:57.17:0,57,652	0/0:22,0:22:63.17:0,63,715	0/0:31,0:31:78.21:0,78,880	0/0:22,0:22:46.02:0,46,521	0/0:23,0:23:66.20:0,66,762	0/0:34,0:35:90.10:0,90,1018	0/0:27,1:28:53.73:0,54,850	0/0:44,0:44:99:0,117,1339	1/1:0,18:18:45.02:412,45,0	0/0:22,0:22:60.17:0,60,684	0/0:12,0:12:27.05:0,27,286	0/0:44,1:46:80.62:0,81,1115	0/0:15,0:15:42.12:0,42,484	0/0:26,0:26:69.19:0,69,786	0/0:31,0:31:90.25:0,90,1028	0/0:19,1:20:20.66:0,21,482	1/1:4,15:19:45.02:412,45,0	0/0:24,0:23:57.17:0,57,657	1/1:2,8:10:24.01:220,24,0
chr10	99159107	.	CT	C	8491.54	PASS	AB=0.923;AC=51;AF=0.911;AN=56;BaseQRankSum=1.486;DP=575;FS=3.638;HRun=12;HaplotypeScore=69.8191;InbreedingCoeff=0.6216;MQ=68.34;MQ0=0;MQRankSum=0.769;QD=15.67;ReadPosRankSum=2.239;VQSLOD=6.0296;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:17:17.32:50,17,0	1/1:1,8:9:23.91:186,24,0	0/0:11,0:10:9.39:0,9,88	0/1:11,1:11:12.43:12,0,72	1/1:8,23:31:13.32:453,13,0	1/1:4,17:22:43.86:331,44,0	1/1:2,7:9:17.93:139,18,0	1/1:10,24:35:71.56:536,72,0	1/1:2,12:14:29.86:232,30,0	1/1:7,25:33:79.69:607,80,0	1/1:6,21:28:64.76:493,65,0	1/1:1,12:14:28.93:215,29,0	1/1:3,18:22:46.85:354,47,0	1/1:1,12:13:35.85:279,36,0	1/1:2,17:19:47.81:372,48,0	0/0:19,3:22:1.30:0,1,355	1/1:6,12:18:35.67:269,36,0	1/1:2,0:16:25.99:76,26,0	1/1:8,12:22:12.47:260,12,0	1/1:3,36:40:81.39:795,81,0	1/1:2,16:18:35.84:279,36,0	1/1:3,11:14:32.87:255,33,0	1/1:4,18:22:47.37:371,47,0	1/1:6,4:10:25.94:190,26,0	1/1:1,25:26:35.30:457,35,0	1/1:5,16:22:46.85:353,47,0	1/1:7,33:40:77.59:603,78,0	1/1:2,14:16:41.82:325,42,0
chr10	99159480	.	GA	G	659.34	PASS	AB=0.545;AC=1;AF=0.018;AN=56;BaseQRankSum=5.780;DP=900;FS=0.000;HRun=1;HaplotypeScore=87.5839;InbreedingCoeff=-0.0147;MQ=75.03;MQ0=1;MQRankSum=-2.428;QD=27.47;ReadPosRankSum=1.411;VQSLOD=3.4660;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,116,1792	0/0:14,0:14:42.13:0,42,648	0/0:37,0:36:99:0,108,1637	0/0:36,0:33:95.77:0,96,1403	0/0:44,0:44:99:0,132,2095	0/0:28,0:28:78.27:0,78,1247	0/0:30,0:30:90.29:0,90,1415	0/0:41,0:41:99:0,120,1898	0/0:31,0:31:93.32:0,93,1477	0/0:54,0:54:99:0,163,2591	0/0:31,0:31:93.27:0,93,1416	0/0:22,0:22:66.22:0,66,1048	0/0:26,0:26:78.25:0,78,1224	0/0:27,0:27:81.27:0,81,1265	0/0:33,0:33:99:0,99,1528	0/0:50,0:50:99:0,150,2341	0/0:27,0:27:78.24:0,78,1221	0/1:4,20:22:27.60:734,0,28	0/0:31,0:31:90.31:0,90,1440	0/0:47,0:47:99:0,141,2252	0/0:37,0:37:99:0,111,1724	0/0:38,0:38:99:0,114,1792	0/0:35,0:35:99:0,105,1654	0/0:32,0:32:96.28:0,96,1503	0/0:14,0:14:42.14:0,42,671	0/0:31,0:31:90.31:0,90,1438	0/0:25,0:25:75.24:0,75,1173	0/0:13,0:13:39.13:0,39,623
chr10	99160393	.	A	ATTAT	1309.96	PASS	AC=22;AF=0.550;AN=40;BaseQRankSum=-5.216;DP=283;FS=0.000;HRun=0;HaplotypeScore=56.6560;InbreedingCoeff=0.6068;MQ=68.37;MQ0=2;MQRankSum=0.793;QD=14.09;ReadPosRankSum=-1.018;VQSLOD=2.7761;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:5,0:5:9.02:0,9,107	./.	./.	1/1:10,0:10:2.97:20,3,0	1/1:7,3:10:9.03:208,9,0	./.	./.	./.	./.	1/1:2,1:3:3.01:69,3,0	1/1:5,1:6:3.01:69,3,0	1/1:3,1:4:3.01:69,3,0	1/1:6,1:7:3.01:69,3,0	0/0:11,0:11:18.05:0,18,240	1/1:5,3:8:9.03:208,9,0	0/0:28,0:28:36.12:0,36,536	1/1:12,7:20:18.06:396,18,0	0/0:18,0:18:6.02:0,6,91	0/0:9,0:9:3.01:0,3,45	0/0:5,0:5:3.01:0,3,45	./.	1/1:4,1:5:3.01:69,3,0	1/1:2,1:3:3.01:69,3,0	1/1:13,4:17:9.03:208,9,0	0/0:3,0:6:9.01:0,9,84	0/0:15,0:15:9.03:0,9,127	0/0:14,0:19:15.02:0,15,140
chr10	99161649	.	T	TTC	429.57	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.452;DP=580;FS=1.841;HRun=0;HaplotypeScore=75.4929;InbreedingCoeff=0.8189;MQ=64.87;MQ0=21;MQRankSum=-1.645;QD=22.61;ReadPosRankSum=-0.683;VQSLOD=3.7998;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:77.70:0,78,603	0/0:6,0:6:17.96:0,18,183	0/0:60,0:20:12.51:0,13,151	0/0:46,0:8:7.97:0,8,59	0/0:25,0:25:32.67:0,33,540	0/0:15,0:15:41.90:0,42,460	0/0:19,0:19:52.20:0,52,547	0/0:29,0:29:40.80:0,41,569	0/0:12,0:12:25.97:0,26,324	0/0:12,0:12:30.55:0,31,297	0/0:16,0:16:44.98:0,45,481	0/0:20,0:20:57.88:0,58,612	0/0:17,0:17:47.87:0,48,500	0/0:13,0:13:33.96:0,34,286	0/0:24,0:24:43.46:0,43,627	0/0:15,0:15:35.32:0,35,341	0/0:23,0:23:61.41:0,61,607	1/1:1,15:19:29.25:524,29,0	0/0:19,0:19:32.15:0,32,482	0/0:22,0:22:60.35:0,60,567	0/0:10,0:10:23.31:0,23,220	0/0:19,0:19:50.11:0,50,490	0/0:19,0:20:51.45:0,51,451	0/0:17,0:17:50.94:0,51,539	0/0:18,0:18:43.82:0,44,401	0/0:26,0:26:71.41:0,71,692	0/0:18,0:18:47.96:0,48,519	0/0:3,0:3:6:0,6,62
chr10	99163240	.	CGTGT	C	1089.05	PASS	AB=0.988;AC=17;AF=0.304;AN=56;BaseQRankSum=-2.259;DP=665;FS=3.275;HRun=0;HaplotypeScore=163.0463;InbreedingCoeff=-0.1113;MQ=58.88;MQ0=16;MQRankSum=-3.000;QD=3.35;ReadPosRankSum=-0.794;VQSLOD=2.5518;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:64.46:0,64,1070	0/0:4,0:4:12.01:0,12,120	0/0:52,0:18:20.08:0,20,236	0/0:50,0:21:21.41:0,21,237	0/1:18,0:19:31.12:31,0,155	0/1:12,0:12:60.89:61,0,65	0/0:25,0:25:28.29:0,28,173	1/1:20,6:25:20.79:339,21,0	0/1:24,0:24:9.69:10,0,168	0/0:24,0:23:19.11:0,19,159	0/0:8,0:7:4.50:0,4,16	0/0:25,0:25:15.23:0,15,275	0/1:19,0:19:13.96:14,0,120	0/0:27,0:27:45.76:0,46,334	0/1:28,0:29:7.01:7,0,405	0/0:31,0:31:48.16:0,48,1097	0/1:28,0:28:7.31:7,0,243	0/1:17,0:17:1.65:2,0,200	0/1:16,0:15:72.89:102,0,73	0/1:11,0:11:0.87:1,0,75	0/1:32,0:29:75.48:75,0,174	0/0:12,0:10:1.56:0,2,96	0/0:9,1:10:14.02:0,14,133	0/1:39,0:37:53.34:53,0,281	0/0:13,0:12:25.90:0,26,172	0/1:26,2:28:13.92:481,0,14	0/1:22,0:22:29.91:30,0,204	1/1:3,0:3:3.01:31,3,0
chr10	99163262	.	T	TG	3405.46	PASS	AB=0.972;AC=22;AF=0.393;AN=56;BaseQRankSum=6.205;DP=671;FS=17.321;HRun=1;HaplotypeScore=145.1593;InbreedingCoeff=-0.4984;MQ=47.05;MQ0=27;MQRankSum=1.204;QD=7.57;ReadPosRankSum=2.198;VQSLOD=-0.3296;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:80.88:0,81,898	0/0:5,0:5:10.07:0,10,40	0/0:54,0:8:24.06:0,24,272	0/0:52,0:11:24.39:0,24,238	0/1:19,0:19:62.98:63,0,133	0/1:13,0:12:26.76:117,0,27	0/1:25,1:26:76.44:185,0,76	0/1:29,0:28:99:191,0,271	0/1:23,0:23:91.04:171,0,91	0/1:17,0:16:63.42:63,0,100	0/1:11,1:11:9.78:56,0,10	0/1:20,1:22:99:172,0,112	0/1:16,1:17:38.76:39,0,80	0/1:23,1:24:99:147,0,238	0/1:30,1:31:85.50:85,0,111	0/0:20,0:20:54.18:0,54,698	0/1:26,0:26:74.57:243,0,75	0/0:17,0:15:29.74:0,30,260	0/1:16,0:14:52.44:52,0,149	0/1:11,0:11:53.63:131,0,54	0/1:37,0:34:75.72:76,0,77	0/1:18,1:16:14.74:211,0,15	0/1:10,0:10:31.67:32,0,41	0/1:44,0:41:15.78:496,0,16	0/0:15,2:16:19.48:0,19,141	0/1:21,6:26:30.40:548,0,30	0/1:24,0:24:77.51:229,0,78	1/1:2,1:3:9.02:98,9,0
chr10	99163264	.	T	TG	5066.34	PASS	AB=0.835;AC=35;AF=0.625;AN=56;BaseQRankSum=4.581;DP=657;FS=8.263;HRun=1;HaplotypeScore=139.1038;InbreedingCoeff=0.4127;MQ=46.57;MQ0=28;MQRankSum=5.423;QD=12.42;ReadPosRankSum=5.911;VQSLOD=3.3402;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:36.55:0,37,693	1/1:2,3:5:11.98:102,12,0	0/0:54,0:7:21.02:0,21,224	0/0:49,0:9:14.51:0,15,131	0/1:14,4:18:10.10:117,0,10	0/1:10,3:12:3.47:166,0,3	1/1:20,4:24:25.04:261,25,0	0/0:27,0:26:19.91:0,20,420	0/1:17,6:23:13.06:276,0,13	0/1:12,3:14:16.90:189,0,17	1/1:9,3:11:6.29:78,6,0	1/1:17,4:21:27.51:359,28,0	0/1:12,5:17:10.69:114,0,11	0/1:21,2:23:8.73:262,0,9	1/1:20,11:31:45.60:609,46,0	0/0:20,0:20:51.16:0,51,656	1/1:19,7:26:45.47:508,45,0	0/0:16,0:14:30.18:0,30,185	0/1:15,2:15:99:123,0,120	1/1:10,0:10:13.21:96,13,0	1/1:32,5:34:6.99:227,7,0	1/1:12,6:15:27.19:239,27,0	1/1:6,4:10:18.35:161,18,0	1/1:33,11:41:51.14:708,51,0	1/1:13,4:16:10.18:118,10,0	0/0:27,0:26:0.05:0,0,133	1/1:19,5:24:37.07:334,37,0	1/1:3,0:3:6.48:20,6,0
chr10	99163266	.	TG	T	5370.26	PASS	AB=0.860;AC=39;AF=0.696;AN=56;BaseQRankSum=10.801;DP=649;FS=9.860;HRun=2;HaplotypeScore=135.7380;InbreedingCoeff=0.1307;MQ=47.46;MQ0=27;MQRankSum=1.566;QD=10.35;ReadPosRankSum=6.347;VQSLOD=2.0799;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,1:55:58.10:0,58,635	1/1:5,0:5:6.97:23,7,0	0/0:54,1:8:15.01:0,15,170	0/1:46,0:8:3.36:3,0,53	0/1:14,3:17:1.94:109,0,2	1/1:9,4:12:1.46:132,1,0	1/1:20,5:25:15.42:280,15,0	0/1:18,9:26:99:248,0,249	0/1:20,3:23:4.39:327,0,4	0/1:14,1:14:37.03:117,0,37	0/1:10,2:11:0.67:55,0,1	1/1:15,5:20:31.23:308,31,0	0/1:14,3:17:4.88:154,0,5	0/1:20,2:22:27.26:225,0,27	1/1:26,4:30:42.67:303,43,0	0/0:20,0:20:53.14:0,53,684	1/1:23,2:25:38.22:397,38,0	0/1:10,6:14:43.60:213,0,44	0/1:13,3:13:89.16:126,0,89	1/1:9,1:10:15.22:169,15,0	1/1:35,1:33:5.23:138,5,0	1/1:16,2:15:29.23:276,29,0	1/1:9,1:10:17.70:131,18,0	1/1:37,7:41:65.24:714,65,0	0/1:13,3:15:9.21:19,0,9	1/1:17,11:27:29.18:436,29,0	1/1:24,1:25:31.57:367,32,0	1/1:1,2:3:9.02:98,9,0
chr10	99163267	.	G	GT	7782.28	PASS	AB=0.849;AC=40;AF=0.714;AN=56;BaseQRankSum=10.003;DP=647;FS=8.232;HRun=1;HaplotypeScore=130.2913;InbreedingCoeff=0.2135;MQ=47.37;MQ0=25;MQRankSum=0.431;QD=15.11;ReadPosRankSum=7.235;VQSLOD=4.2606;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:57:18.05:0,18,509	1/1:3,3:6:12.01:114,12,0	0/0:55,0:7:15.01:0,15,170	0/1:44,0:7:3.62:4,0,53	0/1:13,4:17:0.03:176,0,0	1/1:9,3:11:5.23:183,5,0	1/1:20,4:25:26.01:354,26,0	0/1:27,0:26:99:249,0,243	1/1:17,6:23:3.76:488,4,0	0/1:12,3:15:27.44:244,0,27	0/1:9,3:11:0.30:55,0,0	1/1:16,4:20:34.34:458,34,0	0/1:12,5:17:0.82:227,0,1	0/1:19,2:21:25.92:305,0,26	1/1:19,11:30:49.77:631,50,0	0/0:17,0:20:54.07:0,54,675	1/1:18,7:25:39.70:588,40,0	0/1:8,6:14:43.20:308,0,43	0/1:15,2:14:86.13:167,0,86	1/1:9,0:10:18.81:181,19,0	1/1:16,6:34:6.94:285,7,0	1/1:12,6:15:29.72:355,30,0	1/1:6,4:10:19.96:215,20,0	1/1:31,11:40:72.03:979,72,0	0/1:12,4:15:0.40:72,0,0	1/1:24,4:27:30.37:527,30,0	1/1:18,5:23:44.55:503,45,0	1/1:2,1:3:9.03:117,9,0
chr10	99163474	.	TA	T	6502.66	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-3.213;DP=486;FS=5.768;HRun=1;HaplotypeScore=61.9099;InbreedingCoeff=0.7427;MQ=65.78;MQ0=9;MQRankSum=-2.652;QD=15.90;ReadPosRankSum=-0.989;VQSLOD=4.3300;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:62.33:492,62,0	1/1:0,6:6:11.90:96,12,0	0/0:47,0:16:29.12:0,29,256	0/0:30,0:10:11.81:0,12,112	1/1:19,2:21:39.29:268,39,0	1/1:15,1:16:39.70:277,40,0	1/1:7,0:7:14.62:104,15,0	1/1:22,3:24:59.56:449,60,0	1/1:17,2:19:18.59:315,19,0	1/1:22,2:24:68.60:518,69,0	1/1:11,0:11:26.50:176,26,0	1/1:8,0:9:20.87:128,21,0	1/1:9,1:10:18.35:122,18,0	1/1:0,6:6:6.02:70,6,0	1/1:22,1:23:60.42:488,60,0	0/1:16,0:16:6.96:7,0,154	1/1:20,2:22:63.30:467,63,0	1/1:20,1:21:51.54:362,52,0	1/1:23,2:24:44.53:382,45,0	1/1:13,1:14:30.87:176,31,0	1/1:6,0:6:17.49:136,17,0	1/1:0,10:10:17.74:115,18,0	1/1:12,0:12:25.41:162,25,0	1/1:11,0:11:31.20:229,31,0	1/1:16,1:16:34.41:252,34,0	1/1:16,0:17:34.36:254,34,0	1/1:13,0:13:23.42:145,23,0	1/1:17,0:20:37.65:314,38,0
chr10	99165575	.	CATGTGTGT	C	4983.60	PASS	AB=0.500;AC=46;AF=0.852;AN=54;BaseQRankSum=-1.466;DP=484;FS=0.000;HRun=0;HaplotypeScore=130.0028;InbreedingCoeff=0.5810;MQ=70.00;MQ0=19;MQRankSum=-4.840;QD=12.27;ReadPosRankSum=2.555;VQSLOD=3.4934;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:28:53.63:439,54,0	1/1:0,8:8:2.99:29,3,0	0/0:27,0:18:51.07:0,51,538	0/0:24,0:16:41.86:0,42,398	1/1:14,0:13:29.91:251,30,0	1/1:1,0:24:6.02:142,6,0	1/1:28,0:31:39.33:444,39,0	1/1:24,0:23:58.37:410,58,0	1/1:0,7:7:2.79:25,3,0	1/1:0,8:8:14.78:97,15,0	0/1:0,7:8:0:0,0,0	1/1:0,15:16:5.91:153,6,0	1/1:0,18:19:5.06:70,5,0	1/1:0,19:20:11.71:298,12,0	1/1:1,1:12:5.82:114,6,0	0/0:16,0:16:48.05:0,48,1099	1/1:22,2:26:38.69:561,39,0	1/1:19,1:21:44.68:464,45,0	1/1:16,0:15:42.64:314,43,0	./.	1/1:22,0:18:44.65:330,45,0	1/1:0,14:14:3.01:76,3,0	0/1:0,11:13:0.29:0,0,0	1/1:0,34:35:2.53:67,3,0	1/1:8,2:11:26.68:320,27,0	1/1:13,0:13:31.87:242,32,0	1/1:0,0:4:3.01:68,3,0	1/1:1,0:8:3.01:70,3,0
chr10	99165733	.	CTG	C	13362.63	PASS	AB=0.957;AC=51;AF=0.911;AN=56;BaseQRankSum=0.890;DP=665;FS=1.345;HRun=0;HaplotypeScore=85.9655;InbreedingCoeff=0.8753;MQ=74.49;MQ0=5;MQRankSum=-4.090;QD=22.27;ReadPosRankSum=6.122;VQSLOD=4.7113;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,27:44:65.87:756,66,0	1/1:1,7:8:21.02:238,21,0	0/0:31,0:24:24.23:0,24,382	0/0:34,0:27:39.86:0,40,495	1/1:5,29:35:67.97:731,68,0	1/1:9,20:29:57.17:691,57,0	1/1:9,12:21:36.11:437,36,0	1/1:11,15:26:45.10:513,45,0	1/1:4,11:15:27.08:327,27,0	1/1:5,14:19:39.11:462,39,0	1/1:6,12:18:39.04:440,39,0	1/1:4,16:21:41.96:487,42,0	1/1:5,16:21:36.11:437,36,0	1/1:2,12:14:39.12:473,39,0	1/1:8,11:19:18.05:218,18,0	0/1:21,1:22:0.28:0,0,496	1/1:5,21:26:54.17:655,54,0	1/1:2,15:16:10.58:478,11,0	1/1:12,13:27:41.94:473,42,0	1/1:4,24:27:65.97:703,66,0	1/1:4,21:25:51.16:619,51,0	1/1:2,17:19:45.10:529,45,0	1/1:4,17:21:45.14:546,45,0	1/1:5,29:32:72.22:874,72,0	1/1:5,16:21:36.11:437,36,0	1/1:6,25:31:75.17:854,75,0	1/1:3,14:17:36.11:437,36,0	1/1:6,16:22:45.14:546,45,0
chr10	99165812	.	T	TGA	641.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.008;DP=688;FS=0.981;HRun=0;HaplotypeScore=87.1932;InbreedingCoeff=0.9996;MQ=85.29;MQ0=0;MQRankSum=-1.997;QD=40.07;ReadPosRankSum=1.706;VQSLOD=5.2151;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:96.27:0,96,1278	0/0:12,0:12:33.11:0,33,446	0/0:24,0:24:66.14:0,66,820	0/0:22,0:22:39.76:0,40,597	0/0:35,0:35:96.27:0,96,1260	0/0:27,0:27:66.22:0,66,893	0/0:25,0:25:66.20:0,66,873	0/0:38,0:38:99:0,99,1296	0/0:23,0:23:69.19:0,69,913	0/0:25,0:25:72.23:0,72,950	0/0:20,0:20:57.19:0,57,770	0/0:28,0:28:66.19:0,66,858	0/0:24,0:24:54.18:0,54,725	0/0:14,0:14:42.13:0,42,552	0/0:30,0:30:78.24:0,78,1038	0/0:32,0:32:90.26:0,90,1170	0/0:26,0:26:66.22:0,66,890	1/1:1,15:16:42.14:736,42,0	0/0:24,0:24:60.19:0,60,797	0/0:17,0:17:48.16:0,48,639	0/0:27,0:27:75.25:0,75,1014	0/0:21,0:21:54.18:0,54,730	0/0:26,0:26:69.23:0,69,932	0/0:29,0:29:75.21:0,75,992	0/0:17,0:17:45.15:0,45,607	0/0:27,0:27:81.27:0,81,1095	0/0:25,0:24:69.21:0,69,915	0/0:15,0:15:45.11:0,45,587
chr10	99167693	.	C	CAAA	4749.48	PASS	AB=0.676;AC=38;AF=0.679;AN=56;BaseQRankSum=0.987;DP=660;FS=0.554;HRun=16;HaplotypeScore=143.9706;InbreedingCoeff=0.0491;MQ=78.61;MQ0=3;MQRankSum=-1.410;QD=7.93;ReadPosRankSum=-4.756;VQSLOD=0.0382;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,2:23:27.77:308,28,0	0/1:2,0:11:15.16:57,0,15	0/1:22,0:18:9.75:10,0,58	0/0:25,0:25:17.07:0,17,127	1/1:9,9:28:36.65:366,37,0	0/1:4,0:18:35.64:145,0,36	0/1:8,1:24:1.54:119,0,2	0/1:17,1:30:2.43:339,0,2	0/1:18,0:22:18.87:258,0,19	0/1:22,1:28:80.62:152,0,81	1/1:21,0:23:27.75:239,28,0	1/1:8,10:25:16.89:128,17,0	0/1:9,0:25:11.22:63,0,11	0/1:8,0:32:14.81:70,0,15	1/1:14,2:41:9.22:236,9,0	0/0:18,0:20:28.85:0,29,257	1/1:2,0:13:16.59:194,17,0	0/0:14,0:16:22.73:0,23,200	1/1:22,0:24:30.41:279,30,0	1/1:10,1:24:28.48:268,28,0	0/1:6,0:22:29.21:68,0,29	1/1:6,0:23:9:254,9,0	1/1:11,0:27:5.41:120,5,0	0/1:7,0:18:5.70:100,0,6	0/1:6,2:20:29.51:153,0,30	1/1:11,0:26:7.44:280,7,0	1/1:27,0:32:30.67:426,31,0	1/1:3,1:13:13.21:120,13,0
chr10	99168608	.	ATG	A	6121.91	PASS	AB=0.739;AC=37;AF=0.712;AN=52;BaseQRankSum=3.696;DP=634;FS=22.534;HRun=0;HaplotypeScore=100.5817;InbreedingCoeff=0.6408;MQ=66.44;MQ0=6;MQRankSum=6.619;QD=12.86;ReadPosRankSum=5.314;VQSLOD=2.7975;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:25:15.47:0,15,132	1/1:3,10:14:26.87:269,27,0	0/0:21,0:16:2.92:0,3,17	0/0:17,0:9:0:0,0,0	1/1:9,13:22:30:309,30,0	0/1:10,13:24:9.71:314,0,10	1/1:14,9:26:14.87:149,15,0	0/0:36,0:33:30.12:0,30,228	1/1:13,5:20:17.71:159,18,0	1/1:10,13:23:36.07:385,36,0	1/1:4,7:11:15.04:168,15,0	1/1:5,9:14:15.04:168,15,0	1/1:2,8:12:11.80:99,12,0	0/1:8,9:20:5.22:181,0,5	1/1:10,20:33:41.62:412,42,0	0/0:26,0:26:37.75:0,38,631	1/1:14,12:28:12.22:277,12,0	0/0:18,0:18:20.85:0,21,166	./.	1/1:12,14:27:38.52:366,39,0	1/1:20,19:40:44.63:462,45,0	1/1:13,17:29:41.78:420,42,0	1/1:6,12:18:30.02:336,30,0	1/1:9,20:28:50.94:572,51,0	1/1:8,25:34:57:620,57,0	0/1:29,2:30:17.41:17,0,227	1/1:6,13:19:39.58:438,40,0	./.
chr10	99168642	.	GTTT	G	441.13	PASS	AB=0.784;AC=2;AF=0.037;AN=54;BaseQRankSum=7.362;DP=597;FS=10.570;HRun=3;HaplotypeScore=166.3970;InbreedingCoeff=-0.0446;MQ=60.85;MQ0=9;MQRankSum=-5.593;QD=10.03;ReadPosRankSum=0.833;VQSLOD=-0.6006;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:59.02:0,59,1054	0/0:16,0:16:41.80:0,42,606	0/0:12,0:4:12.04:0,12,181	0/0:16,0:4:4.78:0,5,29	0/0:26,0:26:57.14:0,57,909	0/0:20,0:20:51.06:0,51,736	0/0:24,0:24:48.96:0,49,860	0/1:13,7:17:99:263,0,107	0/0:12,0:12:32.86:0,33,456	0/0:26,0:26:75.09:0,75,1222	0/0:14,0:14:36.11:0,36,603	0/0:16,0:16:36.12:0,36,579	0/0:16,0:16:26.04:0,26,412	0/0:19,0:19:45.08:0,45,720	0/0:34,0:34:74.16:0,74,1030	0/0:27,0:27:81.22:0,81,1805	0/0:31,0:31:77.61:0,78,1253	0/0:16,0:16:42.03:0,42,726	0/0:6,0:6:15.05:0,15,283	0/0:28,0:28:78.08:0,78,1133	0/0:31,0:31:75.06:0,75,1100	0/0:23,0:22:57.06:0,57,743	0/0:23,0:22:50.95:0,51,695	0/0:28,0:27:72.64:0,73,1000	0/0:34,0:34:78.17:0,78,1098	0/1:19,5:23:99:266,0,170	0/0:25,0:25:66.64:0,67,946	./.
chr10	99168643	.	T	TG	443.94	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=5.787;DP=573;FS=1.711;HRun=1;HaplotypeScore=145.8126;InbreedingCoeff=0.7442;MQ=62.07;MQ0=9;MQRankSum=-5.693;QD=18.50;ReadPosRankSum=-0.419;VQSLOD=3.6666;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:36.80:0,37,486	0/0:16,0:16:41.88:0,42,394	0/0:11,0:3:9.03:0,9,109	0/0:16,0:4:5.80:0,6,33	0/0:27,0:27:53.92:0,54,552	0/0:20,0:20:50.87:0,51,483	0/0:24,0:24:48.49:0,48,546	1/1:9,0:9:26.97:227,27,0	0/0:12,0:12:32.95:0,33,331	0/0:26,0:26:71.90:0,72,754	0/0:14,0:14:35.97:0,36,372	0/0:16,0:16:35.94:0,36,367	0/0:16,0:16:29.97:0,30,321	0/0:19,0:19:40.51:0,41,407	0/0:35,0:35:68.84:0,69,652	0/0:27,0:27:81.23:0,81,1067	0/0:32,0:32:77.92:0,78,803	0/0:14,0:14:9.13:0,9,352	0/0:7,0:7:15.04:0,15,179	0/0:28,0:28:71.87:0,72,702	0/0:31,0:31:74.84:0,75,716	0/0:23,0:22:53.81:0,54,481	0/0:23,0:22:47.88:0,48,444	0/0:27,0:26:72.24:0,72,653	0/0:33,0:33:77.74:0,78,698	1/1:9,6:15:0.35:322,0,0	0/0:25,0:25:66.31:0,66,624	./.
chr10	99168650	.	ACATT	A	698.63	PASS	AB=0.771;AC=4;AF=0.074;AN=54;BaseQRankSum=7.461;DP=556;FS=14.397;HRun=0;HaplotypeScore=172.5154;InbreedingCoeff=0.4865;MQ=68.08;MQ0=8;MQRankSum=-5.633;QD=17.91;ReadPosRankSum=1.354;VQSLOD=2.4987;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:57.63:0,58,1582	0/0:14,0:14:39.13:0,39,1109	0/0:15,0:7:10.45:0,10,315	0/1:19,0:7:4.04:4,0,136	0/0:24,0:24:60.21:0,60,1736	0/0:22,0:22:57.18:0,57,1513	0/0:22,0:22:45.15:0,45,1285	1/1:7,0:7:21.07:327,21,0	0/0:13,0:13:36.12:0,36,918	0/0:22,0:22:66.23:0,66,1808	0/0:14,0:14:39.13:0,39,1122	0/0:17,0:17:39.13:0,39,1081	0/0:13,0:13:27.02:0,27,679	0/0:20,0:20:48.16:0,48,1345	0/0:32,0:32:78.27:0,78,2246	0/0:28,0:28:78.27:0,78,2182	0/0:32,0:32:81.28:0,81,2300	0/0:12,0:12:33.11:0,33,900	0/0:9,0:9:27.09:0,27,730	0/0:27,0:27:75.26:0,75,2146	0/0:26,0:26:72.25:0,72,2032	0/0:20,0:19:54.19:0,54,1561	0/0:23,0:22:60.09:0,60,1616	0/0:27,0:26:72.25:0,72,2001	0/0:31,0:31:84.28:0,84,2233	0/1:2,11:13:99:475,0,135	0/0:27,0:27:69.21:0,69,1796	./.
chr10	99168652	.	ATT	A	483.32	PASS	AB=1.000;AC=4;AF=0.074;AN=54;BaseQRankSum=7.698;DP=536;FS=18.327;HRun=2;HaplotypeScore=152.2591;InbreedingCoeff=0.4496;MQ=70.06;MQ0=7;MQRankSum=-4.809;QD=12.08;ReadPosRankSum=0.663;VQSLOD=-0.6289;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:57.56:0,58,1085	0/0:15,0:15:42.14:0,42,844	0/0:16,0:8:13.35:0,13,285	0/1:20,0:8:34.61:35,0,94	0/0:22,0:22:63.22:0,63,1269	0/0:22,0:22:57.14:0,57,1066	0/0:22,0:22:48.16:0,48,948	1/1:0,7:7:21.06:242,21,0	0/0:11,0:11:33.03:0,33,612	0/0:22,0:22:63.20:0,63,1214	0/0:15,0:15:42.14:0,42,843	0/0:16,0:16:42.14:0,42,818	0/0:11,0:11:24.08:0,24,478	0/0:18,0:18:48.16:0,48,955	0/0:32,0:32:81.16:0,81,1636	0/0:26,0:26:78.27:0,78,1565	0/0:29,0:29:81.26:0,81,1596	0/0:12,0:12:33.07:0,33,613	0/0:9,0:9:27.09:0,27,540	0/0:25,0:25:75.26:0,75,1514	0/0:26,0:26:75.24:0,75,1457	0/0:20,0:19:54.19:0,54,1094	0/0:21,0:21:60.21:0,60,1177	0/0:27,0:26:75.26:0,75,1465	0/0:30,0:30:84.22:0,84,1580	0/1:13,0:13:82.78:321,0,83	0/0:24,0:24:66.66:0,67,1245	./.
chr10	99168655	.	GTT	G	506.90	PASS	AB=0.780;AC=4;AF=0.074;AN=54;BaseQRankSum=7.392;DP=532;FS=22.336;HRun=2;HaplotypeScore=152.9618;InbreedingCoeff=0.4498;MQ=74.45;MQ0=4;MQRankSum=-4.013;QD=11.79;ReadPosRankSum=0.190;VQSLOD=-0.7471;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:57.19:0,57,1121	0/0:15,0:15:42.14:0,42,852	0/0:17,0:9:13.19:0,13,374	0/1:22,0:12:36.69:37,0,152	0/0:24,0:24:69.22:0,69,1324	0/0:20,0:20:51.18:0,51,1035	0/0:21,0:21:48.16:0,48,963	1/1:1,6:7:21.06:242,21,0	0/0:11,0:11:33.10:0,33,624	0/0:21,0:21:63.22:0,63,1269	0/0:14,0:14:42.12:0,42,805	0/0:15,0:15:39.13:0,39,792	0/0:12,0:12:30.09:0,30,564	0/0:18,0:18:48.16:0,48,968	0/0:32,0:32:81.16:0,81,1635	0/0:29,0:29:87.27:0,87,1694	0/0:26,0:26:75.26:0,75,1523	0/0:11,0:11:30.09:0,30,573	0/0:10,0:10:30.10:0,30,603	0/0:28,0:28:84.27:0,84,1620	0/0:26,0:26:72.23:0,72,1403	0/0:19,0:19:57.20:0,57,1156	0/0:23,0:23:66.23:0,66,1308	0/0:25,0:25:72.18:0,72,1382	0/0:25,0:25:72.25:0,72,1450	0/1:3,11:14:81.58:342,0,82	0/0:23,0:23:66.20:0,66,1237	./.
chr10	99169725	.	C	CG	1848.58	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.742;DP=654;FS=7.097;HRun=5;HaplotypeScore=64.7418;InbreedingCoeff=0.9981;MQ=84.58;MQ0=0;MQRankSum=-2.043;QD=30.30;ReadPosRankSum=-0.780;VQSLOD=3.7916;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,145,1546	0/0:9,0:9:24.06:0,24,258	0/0:25,0:25:51.72:0,52,502	0/0:17,0:17:24.02:0,24,256	0/0:21,0:21:51.13:0,51,548	0/0:16,0:16:48.10:0,48,507	0/0:16,0:15:48.12:0,48,516	1/1:4,16:20:48.16:631,48,0	0/0:28,0:28:81.20:0,81,870	0/0:28,0:28:78.19:0,78,837	0/0:15,0:15:39.10:0,39,418	0/0:29,0:29:84.16:0,84,877	0/0:15,0:15:45.11:0,45,483	0/0:16,0:16:42.10:0,42,450	0/0:28,0:28:72.18:0,72,774	0/0:26,0:26:75.16:0,75,789	0/0:46,0:46:99:0,129,1377	0/0:22,0:22:60.15:0,60,644	0/0:26,0:26:66.16:0,66,707	0/0:18,0:18:48.12:0,48,514	0/0:30,0:30:78.19:0,78,838	0/0:21,0:21:56.17:0,56,582	0/0:14,0:14:39.10:0,39,418	0/0:21,0:21:63.16:0,63,677	0/0:28,0:28:78.20:0,78,838	1/1:5,26:31:78.23:1008,78,0	0/0:28,0:28:84.21:0,84,901	1/1:1,9:10:27.09:353,27,0
chr10	99169998	.	TC	T	16403.19	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=8.069;DP=554;FS=2.553;HRun=2;HaplotypeScore=84.9512;InbreedingCoeff=0.9872;MQ=81.95;MQ0=0;MQRankSum=-6.444;QD=35.74;ReadPosRankSum=2.633;VQSLOD=5.5013;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.33:0,96,1438	1/1:0,7:7:18.06:234,18,0	0/0:24,0:24:69.21:0,69,1008	0/0:16,0:16:40.02:0,40,568	1/1:0,16:16:42.14:545,42,0	1/1:0,10:10:24.08:311,24,0	1/1:1,29:30:84.27:1090,84,0	1/1:0,25:25:75.23:960,75,0	1/1:0,20:20:48.16:623,48,0	1/1:0,15:15:45.13:569,45,0	1/1:0,4:4:12.04:156,12,0	1/1:0,22:22:66.21:856,66,0	1/1:1,22:23:60.11:779,60,0	1/1:0,19:19:48.15:623,48,0	1/1:0,26:26:78.25:1012,78,0	0/0:22,0:22:66.22:0,66,989	1/1:0,34:34:96.31:1246,96,0	1/1:0,28:28:72.23:934,72,0	1/1:1,22:23:66.14:796,66,0	1/1:0,7:7:21.01:252,21,0	1/1:0,21:21:60.19:776,60,0	1/1:0,14:14:42.14:541,42,0	1/1:0,9:9:27.09:350,27,0	1/1:0,21:21:54.18:701,54,0	1/1:0,18:18:48.16:623,48,0	1/1:0,25:25:72.21:907,72,0	1/1:1,28:29:81.26:1051,81,0	1/1:0,13:13:36.12:467,36,0
chr10	99170951	.	G	GC	546.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.102;DP=502;FS=2.042;HRun=6;HaplotypeScore=53.5863;InbreedingCoeff=0.8687;MQ=75.73;MQ0=0;MQRankSum=0.988;QD=26.03;ReadPosRankSum=1.042;VQSLOD=3.8200;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.18:0,87,880	0/0:5,0:5:15.03:0,15,153	0/0:10,0:11:21.04:0,21,212	0/0:11,0:11:24.05:0,24,240	0/0:5,0:5:15.03:0,15,153	0/0:17,0:16:42.09:0,42,428	0/0:21,0:21:57.13:0,57,581	0/0:24,0:24:57.07:0,57,560	0/0:15,0:15:36.06:0,36,360	0/0:16,0:16:48.11:0,48,489	0/0:3,0:3:6.01:0,6,61	0/0:24,0:24:69.14:0,69,696	0/0:19,0:19:45.10:0,45,458	0/0:18,0:18:51.08:0,51,510	0/0:16,0:16:42.09:0,42,428	0/0:14,0:14:33.04:0,33,337	0/0:26,0:26:72.12:0,72,724	1/1:1,20:21:51.16:641,51,0	0/0:24,0:24:57.07:0,57,558	0/0:7,0:7:21.05:0,21,214	0/0:54,0:54:99:0,150,1514	0/0:8,0:8:24.05:0,24,245	0/0:11,0:11:30.05:0,30,299	0/0:31,0:31:81.18:0,81,826	0/0:17,0:17:33.01:0,33,320	0/0:11,0:11:30.07:0,30,306	0/0:26,0:26:72.14:0,72,727	0/0:16,0:16:48.11:0,48,490
chr10	99171445	.	GA	G	4905.11	PASS	AB=0.654;AC=46;AF=0.821;AN=56;BaseQRankSum=1.832;DP=560;FS=6.746;HRun=14;HaplotypeScore=67.5211;InbreedingCoeff=0.3427;MQ=70.47;MQ0=5;MQRankSum=2.114;QD=10.33;ReadPosRankSum=3.954;VQSLOD=4.3764;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,7:26:48.53:49,0,284	1/1:1,5:6:11.89:82,12,0	0/0:39,0:17:1.07:0,1,53	0/0:24,0:15:7.55:0,8,56	1/1:5,10:17:33.78:216,34,0	1/1:9,13:23:22.01:216,22,0	1/1:5,10:17:7:152,7,0	1/1:6,11:18:6.86:183,7,0	1/1:3,22:25:28.68:342,29,0	1/1:8,17:27:54.42:349,54,0	1/1:5,10:16:7.28:131,7,0	1/1:3,9:12:20.73:144,21,0	1/1:5,15:22:30.75:197,31,0	1/1:3,9:12:17.84:123,18,0	1/1:6,11:20:32.85:203,33,0	0/0:20,0:21:41.87:0,42,373	0/1:7,23:31:9.93:329,0,10	1/1:5,14:23:43.78:270,44,0	1/1:3,7:13:2.88:128,3,0	0/1:11,11:25:16.89:160,0,17	1/1:3,14:18:28.81:191,29,0	1/1:6,8:14:20.77:144,21,0	1/1:5,6:13:14.82:84,15,0	1/1:5,17:26:53.65:348,54,0	1/1:4,13:17:33.45:238,33,0	1/1:8,21:31:63.02:409,63,0	1/1:9,7:17:8.90:189,9,0	0/1:2,3:5:29.15:29,0,44
chr10	99172214	.	C	CTGTG	1406.16	PASS	AB=0.842;AC=32;AF=0.615;AN=52;BaseQRankSum=1.957;DP=549;FS=3.259;HRun=0;HaplotypeScore=113.5883;InbreedingCoeff=-0.1517;MQ=66.71;MQ0=11;MQRankSum=1.033;QD=3.11;ReadPosRankSum=-0.486;VQSLOD=2.1972;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:42:31.30:31,0,39	1/1:2,0:4:4.56:17,5,0	./.	./.	0/1:15,0:15:0.26:3,0,0	1/1:8,0:14:5.49:24,5,0	0/1:23,0:33:7.03:7,0,80	1/1:23,0:22:10.19:84,10,0	0/0:10,0:12:5.04:0,5,34	0/1:13,0:19:24.15:61,0,24	1/1:6,0:10:7.69:35,8,0	0/1:21,1:21:21.08:145,0,21	0/1:12,0:16:3.50:4,0,65	0/1:13,0:15:23.60:24,0,84	0/0:11,0:15:3.03:0,3,148	0/0:21,0:22:36.09:0,36,505	0/1:20,0:41:99:126,0,108	1/1:23,0:22:14.97:165,15,0	0/1:26,0:24:36.08:36,0,36	1/1:5,0:5:4.46:29,4,0	0/1:31,0:34:55.07:55,0,125	1/1:6,0:6:2.60:10,3,0	0/1:7,0:7:0.65:1,0,20	0/1:20,0:38:75.26:84,0,75	1/1:3,0:8:2.74:12,3,0	1/1:14,7:20:14.62:432,15,0	0/1:7,0:16:25.04:25,0,34	0/1:8,2:10:10.03:147,0,10
chr10	99172388	.	TC	T	3972.57	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-1.014;DP=152;FS=14.813;HRun=2;HaplotypeScore=27.7030;InbreedingCoeff=0.5920;MQ=87.79;MQ0=0;MQRankSum=-3.371;QD=32.04;ReadPosRankSum=-0.644;VQSLOD=1.3930;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:30.10:389,30,0	1/1:0,1:1:3.01:39,3,0	0/0:10,0:10:21.07:0,21,305	0/0:8,0:7:14.54:0,15,189	1/1:1,3:4:9.03:109,9,0	1/1:0,5:5:6.02:78,6,0	1/1:1,8:9:24.08:311,24,0	1/1:1,1:2:3.01:39,3,0	1/1:0,4:4:12.04:156,12,0	1/1:1,4:5:12.04:153,12,0	1/1:0,3:3:9.03:117,9,0	1/1:0,6:6:18.06:234,18,0	1/1:0,4:4:12.04:155,12,0	1/1:0,6:6:18.06:234,18,0	1/1:1,4:5:12.04:156,12,0	0/0:9,0:9:24.08:0,24,358	1/1:0,15:15:42.14:544,42,0	0/0:1,0:1:3.01:0,3,45	1/1:1,5:6:15:150,15,0	1/1:1,0:1:3.01:39,3,0	1/1:0,1:1:3.01:39,3,0	1/1:0,2:2:3.01:39,3,0	1/1:0,4:4:9.03:117,9,0	1/1:0,4:4:9.03:117,9,0	1/1:1,1:2:3.01:39,3,0	1/1:0,3:3:6.02:78,6,0	1/1:1,12:13:36.07:448,36,0	1/1:0,6:6:15.05:194,15,0
chr10	99173711	.	CT	C	4738.96	PASS	AB=0.665;AC=32;AF=0.571;AN=56;BaseQRankSum=-4.344;DP=683;FS=3.568;HRun=13;HaplotypeScore=118.8974;InbreedingCoeff=0.3416;MQ=67.06;MQ0=22;MQRankSum=-0.067;QD=9.91;ReadPosRankSum=5.040;VQSLOD=4.0741;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:52:98.95:0,99,573	1/1:2,0:6:5.53:17,6,0	0/0:22,0:12:4.25:0,4,22	0/1:25,0:20:22.14:22,0,55	0/1:9,16:26:1.15:238,0,1	0/1:8,14:22:5.65:281,0,6	0/1:6,12:18:19.60:202,0,20	0/0:24,0:37:53.73:0,54,345	0/1:5,9:13:12.22:76,0,12	1/1:7,21:28:56.56:413,57,0	1/1:7,12:18:6.56:209,7,0	1/1:13,13:24:23.53:195,24,0	1/1:9,11:19:39.06:249,39,0	0/1:5,10:16:4.47:115,0,4	0/1:17,8:23:1.45:234,0,1	0/0:18,1:19:18.15:0,18,335	1/1:8,39:47:70.53:673,71,0	0/0:11,0:27:13.88:0,14,71	0/1:10,9:16:3.27:147,0,3	1/1:6,16:23:44.17:308,44,0	0/1:7,10:16:2.32:148,0,2	1/1:5,12:17:24.31:176,24,0	1/1:8,20:28:12.03:252,12,0	1/1:10,16:25:41.18:308,41,0	1/1:8,14:22:29.39:218,29,0	0/0:10,2:32:8.66:0,9,196	0/1:11,17:25:10.41:258,0,10	0/0:1,0:8:14.20:0,14,71
chr10	99175082	.	G	GT	701.71	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.016;DP=628;FS=3.841;HRun=9;HaplotypeScore=118.1231;InbreedingCoeff=0.8805;MQ=69.20;MQ0=0;MQRankSum=1.235;QD=25.06;ReadPosRankSum=0.145;VQSLOD=2.6384;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:77.95:0,78,677	0/0:11,0:11:29.99:0,30,260	0/0:11,0:11:17.22:0,17,155	0/0:9,0:8:5.05:0,5,69	0/0:33,0:33:95.94:0,96,829	0/0:24,0:24:65.90:0,66,564	0/0:16,0:16:41.97:0,42,360	0/0:33,0:33:71.86:0,72,607	0/0:16,0:16:41.99:0,42,364	0/0:25,0:25:65.92:0,66,572	0/0:20,0:20:56.98:0,57,494	0/0:20,0:20:50.91:0,51,433	0/0:19,0:19:47.95:0,48,413	0/0:16,0:16:32.91:0,33,286	0/0:36,0:36:95.97:0,96,830	0/0:21,0:21:47.96:0,48,414	0/0:33,0:33:59.83:0,60,507	1/1:2,26:28:72.19:796,72,0	0/0:18,0:18:38.96:0,39,338	0/0:33,0:33:86.89:0,87,751	0/0:30,0:30:80.96:0,81,698	0/0:14,0:14:38.96:0,39,333	0/0:20,0:20:59.99:0,60,520	0/0:24,0:24:62.97:0,63,546	0/0:16,0:16:44.99:0,45,390	0/0:28,0:28:74.94:0,75,650	0/0:30,0:29:83.91:0,84,718	0/0:13,0:13:38.97:0,39,333
chr10	99175221	.	C	CGTGTGTGT	9419.46	PASS	AB=0.679;AC=45;AF=0.833;AN=54;BaseQRankSum=-2.718;DP=599;FS=1.004;HRun=0;HaplotypeScore=187.3800;InbreedingCoeff=0.4517;MQ=53.99;MQ0=6;MQRankSum=-2.952;QD=19.50;ReadPosRankSum=2.282;VQSLOD=4.4428;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:28:20.29:391,20,0	1/1:12,4:17:7.66:367,8,0	./.	0/0:20,0:8:2.60:0,3,10	1/1:23,2:25:20.29:472,20,0	1/1:26,1:29:23.40:563,23,0	1/1:11,0:19:5.94:132,6,0	1/1:22,0:20:11.95:176,12,0	1/1:8,5:15:14.41:443,14,0	1/1:25,0:25:57.17:1250,57,0	1/1:14,5:20:2.29:121,2,0	1/1:9,5:14:17.63:523,18,0	1/1:11,5:18:12.28:183,12,0	1/1:17,2:19:21.04:483,21,0	1/1:18,10:30:24.08:905,24,0	0/0:15,0:17:42.06:0,42,904	1/1:20,0:20:15.42:319,15,0	1/1:22,0:22:18.05:437,18,0	1/1:21,0:21:21.04:409,21,0	1/1:10,0:19:4.83:127,5,0	1/1:19,0:19:3.32:35,3,0	0/1:10,4:18:15.14:116,0,15	0/0:8,7:17:0.47:0,0,1	0/0:23,10:37:0.89:0,1,2	1/1:13,1:27:7.88:330,8,0	1/1:13,2:25:50.84:1190,51,0	1/1:14,0:22:11.86:326,12,0	1/1:0,4:5:3.01:123,3,0
chr10	99175245	.	T	TGTGTGTGTGT	6623.74	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=-3.517;DP=623;FS=15.239;HRun=0;HaplotypeScore=184.9091;InbreedingCoeff=0.3936;MQ=46.79;MQ0=11;MQRankSum=-1.962;QD=13.04;ReadPosRankSum=0.681;VQSLOD=2.5504;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:27:13.74:423,14,0	1/1:17,0:17:5.82:275,6,0	./.	0/0:46,0:18:1.49:0,1,9	1/1:28,0:27:20.61:479,21,0	1/1:30,0:30:19.16:372,19,0	1/1:22,0:22:5.97:99,6,0	1/1:21,0:19:5.98:81,6,0	1/1:14,0:14:9.03:216,9,0	1/1:23,0:23:35.48:684,35,0	1/1:19,0:19:0.93:87,1,0	1/1:15,0:15:13.43:319,13,0	1/1:18,0:18:9.17:135,9,0	1/1:20,0:19:20.64:404,21,0	1/1:32,0:32:16.56:559,17,0	0/0:21,0:21:42.13:0,42,1073	1/1:11,4:17:6.34:163,6,0	1/1:24,0:24:23.87:454,24,0	1/1:11,0:11:14.41:248,14,0	1/1:17,0:17:5.25:158,5,0	1/1:23,0:23:4.47:58,4,0	1/1:16,0:15:2.89:90,3,0	0/0:14,0:14:1.17:0,1,2	1/1:33,0:33:0.94:10,1,0	1/1:29,0:29:5.85:382,6,0	1/1:26,0:26:24.51:532,25,0	1/1:20,0:20:9.08:306,9,0	1/1:5,0:5:3.01:90,3,0
chr10	99175255	.	T	TGTGTGA	2938.09	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=8.594;DP=600;FS=31.163;HRun=0;HaplotypeScore=168.7851;InbreedingCoeff=-0.4409;MQ=62.88;MQ0=9;MQRankSum=-6.259;QD=7.36;ReadPosRankSum=1.992;VQSLOD=0.7284;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:86.11:86,0,95	0/1:18,0:18:93.74:157,0,94	0/0:41,0:23:66.10:0,66,683	0/0:50,0:25:62.17:0,62,706	0/1:25,0:24:99:190,0,152	0/1:25,0:25:99:254,0,126	0/1:21,0:21:63.95:64,0,234	0/0:24,0:23:62.45:0,62,557	0/1:17,0:17:75.44:112,0,75	0/1:25,0:25:99:159,0,246	0/1:15,0:15:35.07:51,0,35	0/1:15,0:15:93.53:174,0,94	0/1:16,0:16:77.54:78,0,112	0/1:19,0:18:99:209,0,128	0/1:34,0:34:99:317,0,333	0/0:20,0:21:57.29:0,57,1038	0/1:14,0:14:55.66:60,0,56	1/1:3,15:25:20.51:537,21,0	0/1:11,0:11:75.82:76,0,88	0/1:14,0:14:68.98:69,0,78	0/0:26,0:26:23.57:0,24,274	0/1:12,0:11:47.67:48,0,63	0/0:13,0:13:13.02:0,13,101	0/0:26,0:26:10.54:0,11,78	0/1:20,0:20:99:149,0,147	0/1:21,0:21:99:173,0,199	0/1:21,0:21:83.86:84,0,184	1/1:3,0:3:3.01:58,3,0
chr10	99176123	.	CCT	C	13031.78	PASS	AB=0.943;AC=47;AF=0.839;AN=56;BaseQRankSum=-4.971;DP=700;FS=17.911;HRun=0;HaplotypeScore=101.7196;InbreedingCoeff=0.8346;MQ=71.47;MQ0=6;MQRankSum=-2.240;QD=22.62;ReadPosRankSum=4.308;VQSLOD=4.0357;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:52:89.01:0,89,783	1/1:2,8:10:18.06:220,18,0	0/0:30,0:27:45.77:0,46,633	0/0:25,1:23:2.45:0,2,430	1/1:5,16:21:45.14:550,45,0	1/1:3,12:16:41.96:482,42,0	1/1:4,22:26:63.20:770,63,0	1/1:9,16:25:45.12:526,45,0	1/1:5,10:15:33.10:403,33,0	1/1:3,10:13:30.09:366,30,0	1/1:3,19:23:54:637,54,0	1/1:10,17:28:44.97:527,45,0	1/1:5,21:26:54:631,54,0	1/1:10,25:35:57.01:674,57,0	1/1:5,30:37:77.91:903,78,0	0/1:31,2:33:7.10:7,0,880	1/1:9,31:41:81.08:967,81,0	0/0:16,0:14:23.80:0,24,169	1/1:6,7:13:23.91:270,24,0	1/1:4,21:25:51.16:623,51,0	1/1:10,32:44:83.93:981,84,0	1/1:11,8:20:24.07:293,24,0	1/1:6,11:19:35.61:394,36,0	1/1:6,26:32:78.07:927,78,0	1/1:2,13:15:39.12:476,39,0	1/1:3,12:15:36.09:425,36,0	1/1:0,17:18:44.67:504,45,0	1/1:5,16:21:39.12:476,39,0
chr10	99176912	.	CACACAG	C	1805.93	PASS	AB=0.730;AC=7;AF=0.125;AN=56;BaseQRankSum=-2.852;DP=845;FS=3.557;HRun=0;HaplotypeScore=286.4363;InbreedingCoeff=0.7028;MQ=52.20;MQ0=14;MQRankSum=-3.455;QD=19.63;ReadPosRankSum=-3.260;VQSLOD=2.5537;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:79.27:0,79,2341	0/0:13,0:13:36:0,36,869	0/0:44,0:12:1.31:0,1,71	0/0:53,0:24:10.57:0,11,418	0/0:22,0:23:29.72:0,30,562	0/0:21,0:21:36.11:0,36,1054	0/0:27,0:26:48.04:0,48,1078	1/1:7,28:35:80.66:810,81,0	0/0:22,0:22:33.04:0,33,759	0/0:36,0:36:72.06:0,72,1647	0/0:22,0:20:23.43:0,23,583	0/0:22,0:22:48.11:0,48,1154	0/0:32,0:32:65.52:0,66,1361	0/0:35,0:35:72.10:0,72,1856	0/0:34,0:34:75.13:0,75,1913	0/0:29,0:29:81.23:0,81,2464	0/0:39,0:39:83.30:0,83,2332	1/1:25,0:23:19.40:134,19,0	0/0:22,0:19:31.85:0,32,672	0/0:27,0:27:44.96:0,45,1174	0/0:51,0:50:96.16:0,96,2213	0/0:31,0:31:58.96:0,59,1450	0/0:24,0:24:29.49:0,29,655	0/0:43,0:43:93.20:0,93,2357	0/0:29,0:30:48.09:0,48,1053	0/1:17,10:27:26.22:977,0,26	0/0:29,0:29:69.08:0,69,1567	1/1:4,1:5:2.98:21,3,0
chr10	99176914	.	CACAG	C	1187.78	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=-0.180;DP=851;FS=0.000;HRun=0;HaplotypeScore=268.5053;InbreedingCoeff=0.4192;MQ=51.81;MQ0=14;MQRankSum=-4.601;QD=14.31;ReadPosRankSum=-2.707;VQSLOD=1.9862;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:82.30:0,82,2271	0/0:13,0:13:36.12:0,36,872	0/0:44,0:12:15.03:0,15,316	0/0:53,0:22:39.34:0,39,607	0/0:23,0:23:32.09:0,32,698	0/0:21,0:21:42.13:0,42,1005	0/0:28,0:27:48.03:0,48,1088	0/1:31,0:31:99:204,0,123	0/0:21,0:22:36:0,36,727	0/0:36,0:36:78.40:0,78,1751	0/0:21,0:19:26.75:0,27,565	0/0:24,0:24:56.66:0,57,1181	0/0:32,0:32:77.77:0,78,1469	0/0:36,0:36:76.36:0,76,1752	0/0:35,0:35:75.10:0,75,1770	0/0:30,0:30:90.28:0,90,2146	0/0:41,0:41:98.23:0,98,2309	1/1:16,9:23:52.18:774,52,0	0/0:23,0:20:40.90:0,41,778	0/0:29,0:28:47.64:0,48,1137	0/0:52,0:51:99:0,115,2413	0/0:32,0:32:61.93:0,62,1283	0/0:26,0:26:35.09:0,35,703	0/0:43,0:43:99:0,99,2240	0/0:28,0:28:57.11:0,57,1176	0/1:27,0:27:98.95:325,0,99	0/0:30,0:30:72.16:0,72,1593	0/0:5,0:5:4.17:0,4,49
chr10	99176924	.	G	GAC	4599.97	PASS	AB=0.957;AC=31;AF=0.554;AN=56;BaseQRankSum=2.026;DP=837;FS=6.082;HRun=0;HaplotypeScore=242.1910;InbreedingCoeff=0.1574;MQ=50.30;MQ0=19;MQRankSum=9.928;QD=7.58;ReadPosRankSum=1.528;VQSLOD=3.7567;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,15:40:18.87:1070,0,19	1/1:12,0:13:9.52:68,10,0	0/0:45,0:8:3.01:0,3,34	0/0:55,0:19:16.75:0,17,128	1/1:15,6:22:18.73:243,19,0	1/1:19,0:19:6.42:144,6,0	1/1:26,0:25:11.24:206,11,0	0/0:35,0:34:26.42:0,26,374	1/1:21,1:22:4.13:103,4,0	0/1:34,0:35:38.04:343,0,38	0/1:20,0:20:36.58:83,0,37	1/1:24,0:24:2.12:88,2,0	0/1:30,0:30:1.37:163,0,1	0/1:31,0:32:9.74:216,0,10	0/1:37,0:38:2.24:198,0,2	0/0:33,0:33:87.08:0,87,997	0/1:36,0:36:20.75:207,0,21	0/0:26,0:24:42.05:0,42,454	0/1:22,0:19:20.85:57,0,21	1/1:27,0:28:15.19:228,15,0	1/1:50,0:48:42.16:391,42,0	1/1:28,0:29:12.50:112,13,0	0/1:21,0:21:0.96:88,0,1	0/1:43,0:45:24.41:240,0,24	1/1:24,0:24:10.24:189,10,0	0/0:33,0:33:31.76:0,32,371	0/1:27,0:27:31.39:162,0,31	0/0:2,0:2:1.25:0,1,3
chr10	99176945	.	AGAGG	A	2685.22	PASS	AB=0.978;AC=22;AF=0.393;AN=56;BaseQRankSum=3.185;DP=804;FS=23.343;HRun=0;HaplotypeScore=273.8577;InbreedingCoeff=-0.3523;MQ=52.00;MQ0=13;MQRankSum=5.041;QD=5.10;ReadPosRankSum=0.301;VQSLOD=0.8982;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:57.85:0,58,1854	0/1:9,0:9:14.90:52,0,15	0/0:42,0:6:5.28:0,5,163	0/0:61,0:21:20.67:0,21,385	1/1:25,0:25:8.93:68,9,0	0/1:16,1:17:23.85:24,0,59	0/1:26,1:26:9.73:110,0,10	0/0:33,0:32:75.89:0,76,1410	0/1:18,2:20:17.04:130,0,17	0/1:30,0:30:17.59:316,0,18	0/1:25,0:24:32.07:157,0,32	0/1:21,0:21:52.73:109,0,53	0/1:20,1:21:58.61:135,0,59	0/1:30,0:30:71.83:72,0,133	0/1:32,0:32:99:116,0,101	0/0:37,0:37:99:0,108,2512	0/1:32,1:33:62.71:63,0,106	0/0:27,0:25:54.13:0,54,1219	0/1:18,0:17:2.16:177,0,2	0/1:34,1:35:48.05:232,0,48	1/1:41,2:42:0.68:219,1,0	0/1:31,0:31:67.65:167,0,68	0/1:21,1:22:16.43:145,0,16	0/1:44,1:45:3.99:321,0,4	0/1:18,0:18:54.49:90,0,54	0/0:32,0:32:90.15:0,90,1684	0/1:24,1:25:78.44:143,0,78	0/0:4,0:2:3.01:0,3,73
chr10	99176949	.	GGAGA	G	9849.57	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=3.069;DP=802;FS=12.063;HRun=0;HaplotypeScore=254.4894;InbreedingCoeff=0.9176;MQ=51.06;MQ0=12;MQRankSum=3.781;QD=18.83;ReadPosRankSum=0.931;VQSLOD=2.7589;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:86.66:0,87,2115	1/1:9,0:9:11.95:234,12,0	0/0:40,0:5:5.06:0,5,161	0/0:64,0:21:9.14:0,9,410	1/1:11,14:25:34.62:289,35,0	1/1:15,1:16:9.44:155,9,0	1/1:20,3:22:26.74:304,27,0	0/0:32,0:31:71.89:0,72,1464	1/1:18,1:19:29.83:392,30,0	1/1:23,6:29:27.46:652,27,0	1/1:21,3:24:20.49:337,20,0	1/1:20,2:22:45.35:541,45,0	1/1:20,0:20:22.81:353,23,0	1/1:30,0:30:29.58:539,30,0	1/1:29,1:30:34.39:450,34,0	0/0:36,0:36:96.31:0,96,2309	1/1:31,3:34:5.98:489,6,0	0/0:28,0:26:48.16:0,48,1184	1/1:6,11:17:43.29:509,43,0	1/1:27,9:36:40.66:616,41,0	1/1:41,3:43:71.41:918,71,0	1/1:31,2:33:57.39:674,57,0	1/1:21,2:23:27.29:399,27,0	1/1:43,4:47:87.89:1147,88,0	1/1:17,1:18:27.40:340,27,0	0/0:32,0:32:87.25:0,87,1941	1/1:21,3:24:43.07:512,43,0	0/0:5,0:3:6:0,6,100
chr10	99177095	.	A	AGG	13651.53	PASS	AB=0.775;AC=24;AF=0.429;AN=56;BaseQRankSum=1.633;DP=982;FS=8.271;HRun=1;HaplotypeScore=370.6234;InbreedingCoeff=-0.7577;MQ=43.84;MQ0=4;MQRankSum=-6.974;QD=15.57;ReadPosRankSum=3.787;VQSLOD=1.8938;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,16:33:7.21:622,0,7	0/1:18,7:25:99:528,0,274	0/0:27,0:10:23.80:0,24,261	0/0:33,0:9:3.04:0,3,131	0/1:24,13:37:99:504,0,289	0/1:18,11:29:99:596,0,279	0/1:18,14:31:99:445,0,185	0/1:24,26:45:99:1327,0,237	0/1:24,7:30:99:262,0,256	0/1:35,15:50:99:705,0,1147	0/1:34,4:38:99:462,0,489	0/1:31,5:36:99:300,0,556	0/1:16,10:26:99:576,0,184	0/1:25,8:33:99:438,0,519	0/1:35,14:49:99:773,0,240	0/0:38,0:38:99:0,111,1679	0/1:28,4:32:99:434,0,233	0/1:8,7:15:51.36:481,0,51	0/1:27,6:26:99:305,0,600	0/1:35,13:47:99:785,0,517	0/1:33,4:35:41.01:41,0,290	0/1:22,20:42:99:820,0,554	0/1:34,19:53:99:985,0,405	0/1:20,5:25:71.56:210,0,72	0/1:31,14:44:99:655,0,701	0/1:32,12:43:99:716,0,647	0/1:22,11:33:99:683,0,448	0/0:5,0:4:12.04:0,12,145
chr10	99177098	.	GAC	G	3016.49	PASS	AB=0.949;AC=23;AF=0.411;AN=56;BaseQRankSum=11.409;DP=992;FS=13.655;HRun=0;HaplotypeScore=404.4128;InbreedingCoeff=-0.6923;MQ=43.70;MQ0=6;MQRankSum=-6.981;QD=3.68;ReadPosRankSum=-0.853;VQSLOD=0.9477;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,4:32:49.56:79,0,50	0/1:20,5:25:99:310,0,219	0/0:24,0:8:14.12:0,14,253	0/0:37,0:9:4.65:0,5,102	0/1:38,1:39:60.02:60,0,234	0/1:30,0:30:24.46:24,0,363	0/1:31,1:31:31.83:32,0,211	0/1:40,8:43:99:513,0,256	0/1:31,0:30:45.75:46,0,269	0/1:51,1:52:99:443,0,966	0/1:33,3:36:23.72:24,0,383	0/0:36,1:37:16.83:0,17,521	0/1:27,0:27:99:217,0,207	0/1:35,0:35:24.91:25,0,475	0/1:49,1:50:20.69:21,0,227	0/0:37,0:37:99:0,108,2004	0/1:32,1:33:86.56:87,0,202	0/1:15,0:15:99:113,0,192	0/1:32,0:24:32.21:32,0,641	0/1:46,1:46:17.87:18,0,450	0/0:35,0:33:25:0,25,332	0/1:41,0:41:14.58:15,0,599	0/1:52,2:54:83.82:84,0,461	0/1:28,1:29:2.95:3,0,99	0/1:44,0:43:38.71:39,0,572	0/1:32,16:47:99:811,0,714	0/1:32,2:34:99:104,0,488	0/1:4,1:4:73.69:74,0,98
chr10	99177187	.	T	TTG	6872.49	PASS	AB=0.880;AC=26;AF=0.464;AN=56;BaseQRankSum=-6.906;DP=1232;FS=26.326;HRun=0;HaplotypeScore=338.9420;InbreedingCoeff=-0.7184;MQ=55.89;MQ0=15;MQRankSum=5.621;QD=6.20;ReadPosRankSum=-2.616;VQSLOD=3.1343;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:50,0:50:8.93:66,9,0	0/1:26,0:24:99:106,0,176	0/0:45,0:25:7.71:0,8,92	0/0:54,0:30:22.90:0,23,272	0/1:48,0:48:87.72:88,0,570	0/1:20,14:35:99:287,0,149	0/1:32,10:42:92.17:92,0,192	0/1:80,0:78:99:265,0,269	0/1:30,8:37:99:480,0,131	0/1:40,0:39:47.38:47,0,507	0/1:41,1:42:89.45:89,0,426	0/1:31,5:36:99:334,0,238	0/1:20,16:36:99:376,0,155	0/1:27,13:40:99:235,0,183	0/1:59,0:59:66.93:67,0,424	0/0:23,0:23:59.74:0,60,661	0/1:26,23:49:99:593,0,233	0/1:19,0:19:3.87:118,0,4	0/1:29,14:44:99:431,0,159	0/1:56,6:61:99:760,0,315	0/1:65,14:80:31.96:893,0,32	0/1:31,4:35:69.47:69,0,186	0/1:36,4:40:99:202,0,331	0/1:19,29:48:41.92:613,0,42	0/1:39,0:37:93.96:94,0,202	0/1:49,0:47:58.92:59,0,427	0/1:43,5:49:99:442,0,278	0/1:18,0:16:63.94:64,0,108
chr10	99177208	.	T	TGA	4526.54	PASS	AB=0.945;AC=25;AF=0.446;AN=56;BaseQRankSum=-3.982;DP=1083;FS=43.329;HRun=0;HaplotypeScore=307.9012;InbreedingCoeff=-0.7699;MQ=47.85;MQ0=17;MQRankSum=3.969;QD=4.50;ReadPosRankSum=4.780;VQSLOD=2.8748;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:56,0:56:0.02:0,0,1	0/1:16,6:20:52.06:252,0,52	0/0:16,0:5:5.95:0,6,54	0/0:33,0:14:14.71:0,15,159	0/1:48,5:53:99:291,0,358	0/1:33,0:33:99:132,0,114	0/1:37,1:35:23.91:24,0,306	0/1:63,0:57:99:301,0,136	0/1:34,0:33:99:217,0,172	0/1:39,3:40:99:329,0,398	0/1:36,6:43:99:310,0,211	0/1:32,0:31:99:129,0,174	0/1:31,0:31:99:196,0,183	0/1:30,1:30:99:137,0,173	0/1:24,30:54:99:237,0,270	0/0:27,0:27:72.14:0,72,816	0/1:45,0:45:99:254,0,277	0/1:17,0:18:14.68:15,0,69	0/1:34,0:31:99:124,0,259	0/1:58,1:56:99:305,0,386	0/1:73,0:73:99:354,0,180	0/1:33,0:33:13.11:13,0,188	0/1:42,0:42:39.47:39,0,314	0/1:44,0:44:90.98:291,0,91	0/1:19,14:33:99:273,0,157	0/1:41,0:39:76.58:77,0,366	0/1:36,1:37:99:186,0,346	0/1:14,0:13:41.23:41,0,114
chr10	99177219	.	GACAGAGAC	G	524.72	PASS	AB=0.936;AC=12;AF=0.214;AN=56;BaseQRankSum=1.863;DP=1015;FS=40.619;HRun=0;HaplotypeScore=386.0379;InbreedingCoeff=-0.2280;MQ=47.37;MQ0=13;MQRankSum=0.350;QD=1.07;ReadPosRankSum=-4.118;VQSLOD=0.4717;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,32:49:0.41:1,0,0	0/1:19,0:18:16.75:17,0,457	0/0:8,0:4:5.92:0,6,40	0/0:19,0:6:14.17:0,14,175	0/1:49,0:50:11.75:12,0,946	0/0:33,0:33:23.74:0,24,868	0/0:35,0:32:17.29:0,17,801	0/1:55,0:50:22.43:22,0,647	0/0:33,0:33:40:0,40,1301	0/1:36,0:36:55.56:56,0,935	0/1:41,0:41:67.24:67,0,914	0/0:31,0:30:31.27:0,31,951	0/0:31,0:31:39.06:0,39,904	0/0:27,0:28:4.40:0,4,643	0/0:47,0:48:45.39:0,45,790	0/0:27,0:27:81.28:0,81,2813	0/0:45,0:45:67.68:0,68,1655	0/1:19,0:20:44.49:314,0,44	0/0:30,0:29:6.72:0,7,895	0/1:51,0:51:11.02:11,0,1380	0/1:71,0:72:58.41:58,0,1825	0/0:35,0:34:0.36:0,0,440	0/0:42,0:42:25.26:0,25,848	0/0:42,0:42:49.64:0,50,1390	0/1:32,0:32:87.91:88,0,365	0/1:41,0:40:4.47:4,0,739	0/0:35,0:36:65.21:0,65,1473	0/1:14,0:13:13.92:14,0,254
chr10	99177243	.	GAC	G	554.25	PASS	AB=0.827;AC=4;AF=0.071;AN=56;BaseQRankSum=11.242;DP=822;FS=1.797;HRun=0;HaplotypeScore=228.9079;InbreedingCoeff=-0.0870;MQ=46.73;MQ0=9;MQRankSum=-5.728;QD=4.47;ReadPosRankSum=-2.892;VQSLOD=2.2712;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,7:43:18.93:0,19,269	0/1:11,5:14:61.29:61,0,338	0/0:8,0:6:18.06:0,18,322	0/0:15,0:12:25.48:0,25,435	0/0:31,5:36:18.02:0,18,726	0/0:26,1:27:36.21:0,36,757	0/0:33,0:30:24.20:0,24,741	0/0:50,2:48:61.08:0,61,1971	0/0:27,1:28:62.37:0,62,1055	0/1:25,10:34:99:271,0,955	0/0:22,6:28:20:0,20,557	0/0:22,1:22:48.15:0,48,860	0/0:21,0:21:29.69:0,30,643	0/0:23,0:23:25.07:0,25,667	0/1:37,1:38:6.32:6,0,501	0/0:30,0:30:87.28:0,87,1624	0/0:37,1:38:40.72:0,41,1298	0/0:19,0:19:26.12:0,26,543	0/0:24,0:18:42.66:0,43,746	0/0:26,8:31:11.27:0,11,799	0/0:52,3:55:73.41:0,73,1638	0/0:22,3:24:2.70:0,3,251	0/0:23,5:28:17.38:0,17,465	0/0:43,0:43:76.22:0,76,1407	0/0:16,4:19:21.07:0,21,362	0/1:26,9:34:99:320,0,860	0/0:31,1:32:14.30:0,14,1092	0/0:11,0:8:8.44:0,8,321
chr10	99179527	.	T	TCTC	31374.64	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=5.725;DP=640;FS=9.763;HRun=0;HaplotypeScore=113.3746;InbreedingCoeff=0.9603;MQ=90.31;MQ0=0;MQRankSum=-10.387;QD=57.46;ReadPosRankSum=2.748;VQSLOD=6.8254;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:33:78.27:1791,78,0	1/1:0,2:3:6.02:138,6,0	0/0:26,0:26:75.25:0,75,1222	0/0:33,0:33:93.28:0,93,1542	1/1:2,10:12:27.05:571,27,0	1/1:0,12:12:30.10:689,30,0	1/1:3,21:25:63.22:1428,63,0	1/1:10,36:48:99:2778,129,0	1/1:6,30:36:93.28:2046,93,0	1/1:5,13:20:51.16:1102,51,0	1/1:1,5:6:18.06:411,18,0	1/1:4,12:16:42.06:868,42,0	1/1:1,21:22:60.21:1369,60,0	1/1:1,25:27:72.25:1657,72,0	1/1:4,27:32:93.32:2074,93,0	0/0:35,0:35:99:0,99,1682	1/1:3,23:26:57.20:1313,57,0	1/1:2,11:13:36.12:829,36,0	1/1:4,19:24:63.20:1365,63,0	1/1:4,17:22:57.15:1221,57,0	1/1:3,27:30:75.26:1727,75,0	1/1:3,14:18:42.14:963,42,0	1/1:1,14:16:45.15:1031,45,0	1/1:0,23:23:53.78:1244,54,0	1/1:5,11:15:33.11:756,33,0	1/1:5,23:29:81.25:1797,81,0	1/1:0,25:24:63.10:1450,63,0	1/1:3,8:11:33.11:755,33,0
chr10	99179788	.	T	TA	5537.84	PASS	AB=0.631;AC=33;AF=0.589;AN=56;BaseQRankSum=8.781;DP=433;FS=8.908;HRun=0;HaplotypeScore=120.7046;InbreedingCoeff=0.5215;MQ=77.79;MQ0=2;MQRankSum=-8.199;QD=18.90;ReadPosRankSum=5.632;VQSLOD=6.2766;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:37.93:0,38,249	1/1:1,3:4:6.01:61,6,0	0/0:29,0:24:59.10:0,59,724	0/0:21,0:15:26.10:0,26,287	1/1:5,12:17:7.70:275,8,0	1/1:2,9:12:31.08:299,31,0	0/1:4,6:10:10.66:157,0,11	0/0:27,0:27:81.26:0,81,1105	0/1:5,7:13:3.41:216,0,3	1/1:8,8:16:15.05:326,15,0	1/1:5,7:12:6.99:192,7,0	1/1:5,5:10:13.59:131,14,0	0/1:6,11:17:20.19:300,0,20	1/1:4,10:14:21.21:301,21,0	1/1:5,12:17:21.86:269,22,0	0/0:19,0:19:54.17:0,54,726	1/1:6,12:17:8.90:285,9,0	0/0:6,0:6:14.84:0,15,105	0/1:6,12:18:3.97:344,0,4	0/1:11,15:26:5.49:423,0,5	0/1:4,4:8:0.73:79,0,1	1/1:3,14:18:39.06:419,39,0	1/1:6,11:18:21.42:321,21,0	0/1:1,1:2:15.26:25,0,15	1/1:4,17:20:47.85:505,48,0	0/0:20,0:20:60.19:0,60,823	1/1:3,19:22:57.87:607,58,0	0/0:4,0:4:12.04:0,12,168
chr10	99179789	.	T	TAA	4132.89	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=11.598;DP=434;FS=2.311;HRun=0;HaplotypeScore=133.5821;InbreedingCoeff=0.3428;MQ=76.80;MQ0=2;MQRankSum=-7.835;QD=13.12;ReadPosRankSum=5.835;VQSLOD=3.6571;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,11:14:32.42:464,32,0	1/1:4,0:4:5.81:32,6,0	0/0:28,0:23:59.37:0,59,742	0/0:21,0:15:29.74:0,30,323	1/1:18,0:18:9.45:228,9,0	1/1:12,0:12:31.85:222,32,0	0/1:10,0:10:21.42:107,0,21	0/0:28,0:28:81.27:0,81,1298	0/1:13,0:13:16.50:165,0,17	1/1:16,0:16:8.03:207,8,0	1/1:13,0:13:1.24:114,1,0	1/1:10,0:10:16.33:97,16,0	0/1:17,0:17:50.48:150,0,50	1/1:14,0:14:18.68:194,19,0	1/1:17,0:17:26.40:176,26,0	0/0:18,0:18:54.16:0,54,849	0/1:17,0:16:3.78:156,0,4	1/1:3,3:6:8.26:109,8,0	0/1:18,0:18:10.38:199,0,10	0/1:27,0:27:23.54:234,0,24	0/1:8,0:8:2.56:80,0,3	1/1:18,0:18:38.42:283,38,0	1/1:18,0:18:4.85:222,5,0	0/1:2,0:2:14.78:15,0,19	1/1:21,0:20:43.25:309,43,0	0/0:20,0:20:60.19:0,60,953	1/1:22,0:22:58.70:371,59,0	0/0:4,0:4:12.04:0,12,196
chr10	99179827	.	A	ATT	1089.96	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=5.275;DP=438;FS=14.991;HRun=0;HaplotypeScore=144.6402;InbreedingCoeff=-0.4318;MQ=64.45;MQ0=0;MQRankSum=-11.510;QD=3.09;ReadPosRankSum=4.197;VQSLOD=1.8225;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,12:20:29.16:460,29,0	0/1:4,0:4:6.36:7,0,6	0/0:9,0:8:13.95:0,14,135	0/0:9,0:8:7.44:0,7,37	0/1:17,0:17:27.50:27,0,154	0/1:14,0:14:21.83:22,0,155	0/1:9,0:9:21.44:21,0,65	0/0:27,0:27:74.11:0,74,459	0/1:19,0:19:69.71:70,0,94	0/1:16,0:16:25.68:26,0,138	0/1:14,0:14:31.23:31,0,131	0/1:15,0:15:3.49:34,0,3	0/1:21,0:21:62.89:63,0,137	0/1:14,0:14:44.29:44,0,144	0/1:14,0:14:28.40:28,0,64	0/0:20,0:20:60.19:0,60,945	0/1:22,0:21:11.36:11,0,203	1/1:4,0:4:2.78:78,3,0	0/1:27,0:27:16.13:16,0,358	0/1:25,0:25:57.53:58,0,67	0/1:9,0:9:15.93:16,0,57	0/1:21,0:21:52.24:52,0,178	0/1:13,0:13:18.80:72,0,19	0/1:7,0:7:22.10:22,0,38	0/1:20,0:19:2.61:3,0,249	0/0:18,0:18:48.02:0,48,283	0/1:28,0:28:88.45:88,0,126	0/0:2,0:2:5.93:0,6,40
chr10	99179828	.	A	ATT	11515.58	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=3.494;DP=453;FS=1.841;HRun=7;HaplotypeScore=116.0880;InbreedingCoeff=0.7829;MQ=63.86;MQ0=0;MQRankSum=-5.966;QD=29.91;ReadPosRankSum=-0.228;VQSLOD=4.2962;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:37.48:495,37,0	1/1:0,4:4:8.99:117,9,0	0/1:9,0:8:3.46:3,0,15	0/1:9,0:8:5.43:5,0,7	1/1:4,13:17:36.08:528,36,0	1/1:5,10:15:30.10:472,30,0	1/1:2,7:9:18.06:291,18,0	0/0:28,0:28:50.10:0,50,304	1/1:4,15:19:45.15:695,45,0	1/1:5,11:16:30.10:460,30,0	1/1:6,8:14:30.10:483,30,0	1/1:0,15:15:39.13:628,39,0	1/1:5,18:23:45.12:690,45,0	1/1:4,9:14:24.08:355,24,0	1/1:3,12:15:33.10:499,33,0	0/0:20,0:20:54.16:0,54,628	1/1:5,17:21:45.09:658,45,0	1/1:4,0:4:9.01:89,9,0	1/1:10,17:27:54.18:813,54,0	1/1:4,22:26:66.14:961,66,0	1/1:4,7:11:21.03:290,21,0	1/1:7,14:23:45.15:685,45,0	1/1:1,12:14:37.01:581,37,0	1/1:1,5:7:15.05:241,15,0	1/1:9,12:21:36.01:496,36,0	0/0:18,0:18:34.33:0,34,203	1/1:4,23:29:63.21:978,63,0	0/0:2,0:2:5.84:0,6,35
chr10	99180779	.	GTCT	G	18434.80	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=8.150;DP=596;FS=1.680;HRun=0;HaplotypeScore=116.0496;InbreedingCoeff=0.9713;MQ=78.74;MQ0=0;MQRankSum=-4.870;QD=40.61;ReadPosRankSum=8.093;VQSLOD=5.1771;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,40:43:99:1666,102,0	1/1:1,5:6:15.05:245,15,0	0/0:19,0:18:51.17:0,51,1042	0/0:25,0:25:69.02:0,69,1300	1/1:1,21:22:54.14:853,54,0	1/1:3,25:28:54.18:882,54,0	1/1:1,18:19:45.15:735,45,0	0/0:43,0:43:99:0,114,2457	1/1:1,24:25:66.23:1078,66,0	1/1:0,16:16:45.15:735,45,0	1/1:0,16:16:42.14:685,42,0	1/1:3,19:22:57.19:930,57,0	1/1:1,16:17:45.15:734,45,0	1/1:1,19:20:50.89:833,51,0	1/1:1,19:20:48.16:784,48,0	0/0:25,0:25:72.25:0,72,1586	1/1:2,29:31:72.25:1175,72,0	1/1:0,16:16:39.13:637,39,0	1/1:0,15:15:45.15:735,45,0	1/1:1,22:23:60.20:979,60,0	1/1:1,24:25:63.22:1029,63,0	1/1:0,11:11:33.11:539,33,0	1/1:0,12:12:27.09:441,27,0	1/1:1,29:30:75.25:1225,75,0	1/1:0,12:12:33.11:538,33,0	0/0:17,1:18:5.17:0,5,1091	1/1:2,23:25:60.20:980,60,0	0/0:12,0:12:36.12:0,36,804
chr10	99182368	.	ATTT	A	12083.36	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-3.278;DP=530;FS=1.487;HRun=11;HaplotypeScore=124.0726;InbreedingCoeff=0.9742;MQ=69.99;MQ0=2;MQRankSum=-1.685;QD=29.47;ReadPosRankSum=2.590;VQSLOD=3.8374;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:26:57.16:741,57,0	1/1:2,5:7:15.04:195,15,0	0/0:19,0:13:12.26:0,12,167	0/0:14,0:7:8.30:0,8,75	1/1:8,18:26:51.13:653,51,0	1/1:8,14:22:45.09:571,45,0	1/1:1,8:9:24.08:309,24,0	0/0:14,0:25:62.58:0,63,489	1/1:4,9:13:30.08:388,30,0	1/1:7,19:26:57.12:730,57,0	1/1:3,17:20:39.06:505,39,0	1/1:1,14:15:42.13:546,42,0	1/1:8,15:23:54.15:702,54,0	1/1:3,16:19:48.15:617,48,0	1/1:8,12:20:42.09:545,42,0	0/0:20,0:21:48.16:0,48,912	1/1:6,23:29:63.18:812,63,0	1/1:1,9:10:27.07:350,27,0	1/1:5,11:17:35.97:444,36,0	1/1:4,15:19:45.11:580,45,0	1/1:1,10:11:18.04:233,18,0	1/1:2,10:12:33.10:425,33,0	1/1:2,13:16:39.05:484,39,0	1/1:2,10:12:27.08:350,27,0	1/1:5,18:23:69.22:893,69,0	0/0:5,1:24:31.48:0,31,444	1/1:14,21:35:78.22:1012,78,0	0/0:6,0:17:35.82:0,36,270
chr10	99182380	.	GA	G	9359.74	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=2.507;DP=510;FS=1.910;HRun=10;HaplotypeScore=112.8948;InbreedingCoeff=0.8282;MQ=64.31;MQ0=2;MQRankSum=-2.533;QD=19.75;ReadPosRankSum=3.060;VQSLOD=4.6317;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,18:23:53.96:460,54,0	1/1:1,4:5:14.99:128,15,0	0/0:19,0:9:14.85:0,15,120	0/1:14,0:6:5.29:5,0,11	1/1:2,21:23:56.94:476,57,0	1/1:1,20:21:44.98:384,45,0	1/1:2,10:12:23.97:201,24,0	1/1:9,12:21:38.95:331,39,0	1/1:5,9:14:38.96:328,39,0	1/1:3,22:25:65.90:556,66,0	1/1:9,12:21:50.96:435,51,0	1/1:2,14:16:47.98:410,48,0	1/1:4,18:22:44.98:383,45,0	1/1:3,15:18:50.95:429,51,0	1/1:4,14:18:32.98:280,33,0	0/0:17,0:17:33.07:0,33,356	1/1:1,28:29:59.95:509,60,0	1/1:0,12:12:29.99:256,30,0	1/1:4,9:13:26.96:230,27,0	1/1:0,17:17:50.96:430,51,0	1/1:6,6:12:23.99:205,24,0	1/1:0,12:12:29.97:252,30,0	1/1:6,12:18:47.97:407,48,0	1/1:6,8:14:32.27:281,32,0	1/1:9,17:26:32.89:500,33,0	1/1:5,23:28:44.73:585,45,0	1/1:8,20:28:71.94:614,72,0	1/1:1,11:12:32.99:283,33,0
chr10	99182806	.	CTT	C	5009.62	PASS	AB=0.829;AC=51;AF=0.911;AN=56;BaseQRankSum=-4.840;DP=326;FS=6.404;HRun=12;HaplotypeScore=51.4201;InbreedingCoeff=0.3711;MQ=74.45;MQ0=4;MQRankSum=-3.494;QD=15.61;ReadPosRankSum=6.524;VQSLOD=2.7621;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:19:44.80:428,45,0	1/1:0,4:4:12.03:122,12,0	0/1:36,1:14:0.21:0,0,194	0/1:22,0:10:12.58:13,0,82	1/1:6,10:16:34.16:363,34,0	1/1:1,10:11:30.06:305,30,0	0/1:1,3:5:0.16:53,0,0	1/1:13,0:34:43.61:196,44,0	1/1:0,9:10:29.81:286,30,0	1/1:3,9:12:24.02:244,24,0	1/1:0,5:5:15.03:152,15,0	1/1:3,3:6:2.63:83,3,0	1/1:1,4:5:12:122,12,0	1/1:0,5:5:15.03:153,15,0	1/1:2,5:7:12.03:122,12,0	0/0:5,0:5:9.03:0,9,134	1/1:2,22:24:54.12:549,54,0	1/1:2,16:17:42.10:427,42,0	1/1:8,15:23:23.04:431,23,0	1/1:4,5:9:21.51:214,22,0	1/1:3,2:5:5.99:61,6,0	1/1:0,5:5:11.92:122,12,0	1/1:2,1:3:6.01:61,6,0	1/1:1,1:1:3.01:31,3,0	1/1:1,5:6:12.02:122,12,0	1/1:4,1:12:22.14:113,22,0	1/1:2,5:7:17.87:166,18,0	1/1:0,0:7:16.47:71,16,0
chr10	99182899	.	C	CT	4972.43	PASS	AB=0.952;AC=42;AF=0.750;AN=56;BaseQRankSum=-6.194;DP=269;FS=2.505;HRun=7;HaplotypeScore=52.2826;InbreedingCoeff=0.6809;MQ=75.69;MQ0=2;MQRankSum=0.058;QD=26.73;ReadPosRankSum=2.882;VQSLOD=5.5631;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:44.30:0,44,173	1/1:0,2:2:3.01:36,3,0	0/1:7,0:5:1.20:1,0,42	0/0:10,0:9:1.75:0,2,56	1/1:1,16:17:36.07:432,36,0	1/1:0,9:9:24.07:288,24,0	1/1:0,4:4:12.04:144,12,0	0/0:24,0:24:1.36:0,1,169	1/1:1,4:5:12.04:144,12,0	1/1:0,3:3:9.03:108,9,0	1/1:1,8:10:29.86:325,30,0	1/1:0,9:9:27.08:324,27,0	1/1:0,7:7:15.05:180,15,0	1/1:0,7:7:18.06:215,18,0	1/1:0,7:7:21.06:252,21,0	0/0:7,0:7:21.03:0,21,203	1/1:4,9:13:30.09:358,30,0	0/1:17,2:19:67.21:73,0,67	1/1:3,11:14:36.08:416,36,0	1/1:2,10:12:33.06:379,33,0	1/1:0,10:10:30.09:360,30,0	1/1:0,2:2:6.02:72,6,0	1/1:1,5:6:15.05:180,15,0	1/1:0,3:3:9.03:108,9,0	1/1:0,9:9:21.06:252,21,0	0/0:6,0:6:12.65:0,13,47	1/1:1,10:11:27.08:324,27,0	0/0:15,0:15:24.29:0,24,129
chr10	99183409	.	A	AT	13763.68	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-8.558;DP=689;FS=0.721;HRun=8;HaplotypeScore=84.8378;InbreedingCoeff=0.9141;MQ=76.95;MQ0=0;MQRankSum=-1.306;QD=26.07;ReadPosRankSum=3.233;VQSLOD=5.3908;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.04:0,93,851	1/1:0,9:9:27.08:312,27,0	0/0:12,0:12:26.98:0,27,238	0/1:15,0:15:2.31:2,0,169	1/1:3,22:25:48.10:538,48,0	1/1:3,26:29:66.18:762,66,0	1/1:6,15:21:42.12:485,42,0	0/0:31,0:31:63.01:0,63,573	1/1:2,32:34:93.28:1073,93,0	1/1:3,23:26:69.21:796,69,0	1/1:3,12:15:5.59:304,6,0	1/1:2,22:24:63.19:727,63,0	1/1:2,20:22:54.16:623,54,0	1/1:4,24:28:47.78:803,48,0	1/1:5,31:36:84.25:970,84,0	0/0:31,0:31:81.03:0,81,741	1/1:4,26:30:66.20:762,66,0	0/0:14,0:15:38.05:0,38,335	1/1:4,20:24:60.18:692,60,0	1/1:3,28:31:81.17:906,81,0	1/1:2,15:18:45.11:508,45,0	1/1:4,30:34:44.66:739,45,0	1/1:2,22:24:57.13:643,57,0	1/1:4,19:23:57.17:658,57,0	1/1:2,25:27:44.79:769,45,0	0/0:33,1:34:58.41:0,58,784	1/1:6,27:33:59.98:692,60,0	0/0:4,0:4:9:0,9,82
chr10	99184029	.	TGA	T	1800.70	PASS	AB=0.519;AC=5;AF=0.089;AN=56;BaseQRankSum=7.290;DP=704;FS=0.578;HRun=0;HaplotypeScore=84.9845;InbreedingCoeff=0.7826;MQ=76.90;MQ0=0;MQRankSum=-3.550;QD=36.75;ReadPosRankSum=-1.098;VQSLOD=5.3998;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,1:48:92.58:0,93,2561	0/0:11,0:11:33.11:0,33,637	0/0:21,0:21:63.21:0,63,1183	0/0:38,0:38:99:0,105,1961	0/0:16,0:16:48.15:0,48,884	0/0:21,0:21:63.22:0,63,1199	0/0:29,0:29:84.29:0,84,1596	1/1:3,25:28:72.24:1101,72,0	0/0:39,0:39:99:0,111,2087	0/0:25,0:25:69.70:0,70,1303	0/0:14,0:14:39.13:0,39,753	0/0:26,0:26:78.25:0,78,1473	0/0:32,0:32:96.32:0,96,1817	0/0:28,0:28:84.29:0,84,1622	0/0:33,0:33:99:0,99,1877	0/0:28,0:28:78.27:0,78,1507	0/0:39,0:38:99:0,114,2151	0/0:30,0:30:87.30:0,87,1665	0/0:14,0:14:39.13:0,39,748	0/0:19,0:19:57.18:0,57,1068	0/0:41,0:41:99:0,120,2318	0/0:17,0:17:48.16:0,48,927	0/0:12,0:12:27.09:0,27,521	0/0:36,0:36:99:0,99,1898	0/0:11,0:11:33.11:0,33,638	0/1:1,13:14:15.72:552,0,16	0/0:27,0:27:78.27:0,78,1480	1/1:1,6:7:18.06:276,18,0
chr10	99185927	.	G	GT	528	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.463;DP=674;FS=1.922;HRun=8;HaplotypeScore=130.5590;InbreedingCoeff=0.9993;MQ=80.81;MQ0=0;MQRankSum=-3.369;QD=26.40;ReadPosRankSum=0.728;VQSLOD=2.0957;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.04:0,84,769	0/0:12,0:12:33:0,33,297	0/0:22,0:22:54.03:0,54,493	0/0:19,0:18:39.43:0,39,348	0/0:43,0:43:99:0,105,956	0/0:35,0:35:93.04:0,93,851	0/0:19,0:19:51.01:0,51,461	0/0:33,0:33:72.02:0,72,659	0/0:17,0:17:42.01:0,42,383	0/0:30,0:30:81.04:0,81,741	0/0:29,0:29:78.04:0,78,713	0/0:17,0:17:42.02:0,42,384	0/0:24,0:24:57.02:0,57,522	0/0:15,0:15:39.02:0,39,357	0/0:21,0:21:57.03:0,57,522	0/0:20,0:20:57.02:0,57,522	0/0:16,0:16:45.02:0,45,412	1/1:2,18:20:54.16:623,54,0	0/0:21,0:20:57.03:0,57,522	0/0:30,0:30:90.05:0,90,824	0/0:29,0:29:75:0,75,679	0/0:31,0:31:93.02:0,93,842	0/0:25,0:25:75.04:0,75,686	0/0:21,0:21:63.03:0,63,576	0/0:26,0:26:62.99:0,63,572	0/0:30,0:30:84.04:0,84,765	0/0:26,0:26:72.04:0,72,659	0/0:11,0:11:33.02:0,33,302
chr10	99186296	.	GA	G	9799.53	PASS	AB=0.958;AC=44;AF=0.786;AN=56;BaseQRankSum=9.090;DP=579;FS=4.950;HRun=10;HaplotypeScore=59.2593;InbreedingCoeff=0.7977;MQ=71.16;MQ0=0;MQRankSum=-0.216;QD=20.81;ReadPosRankSum=5.922;VQSLOD=5.3726;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.17:0,75,811	1/1:0,13:13:38.99:339,39,0	0/1:12,0:12:12.07:12,0,96	0/1:10,1:10:12.01:12,0,81	1/1:5,25:30:74.96:651,75,0	1/1:5,24:29:65.97:573,66,0	1/1:0,13:13:32.99:287,33,0	0/0:28,1:29:49.14:0,49,763	1/1:0,18:18:47.99:417,48,0	1/1:1,17:18:50.99:443,51,0	1/1:8,14:22:41.96:365,42,0	1/1:1,23:24:56.98:495,57,0	1/1:3,21:24:56.98:495,57,0	1/1:2,16:18:44.99:391,45,0	1/1:2,22:24:56.89:495,57,0	0/0:18,0:18:48.11:0,48,522	1/1:1,18:19:50.98:443,51,0	1/1:1,8:9:23.99:208,24,0	1/1:3,20:23:59.89:510,60,0	1/1:2,38:41:88.54:919,89,0	1/1:0,11:11:32.99:287,33,0	1/1:1,15:16:44.99:391,45,0	1/1:1,33:34:92.93:807,93,0	1/1:4,14:20:46.06:377,46,0	1/1:3,17:20:47.99:417,48,0	0/0:28,0:28:49.14:0,49,763	1/1:1,21:22:53.99:469,54,0	0/0:5,0:5:15.04:0,15,166
chr10	99186806	.	TAA	T	8840.78	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-10.236;DP=538;FS=5.782;HRun=12;HaplotypeScore=80.0225;InbreedingCoeff=0.9655;MQ=75.89;MQ0=1;MQRankSum=-0.761;QD=23.58;ReadPosRankSum=2.818;VQSLOD=4.8232;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:26:60.98:0,61,573	1/1:1,11:13:26.79:327,27,0	0/0:19,0:18:14.90:0,15,164	0/0:11,0:9:14.91:0,15,135	1/1:2,16:19:20.62:378,21,0	1/1:2,17:19:51.11:519,51,0	1/1:0,10:10:24.05:244,24,0	0/0:30,0:31:48.88:0,49,511	1/1:2,17:19:51.11:519,51,0	1/1:1,14:15:36.03:357,36,0	1/1:4,15:20:44.80:439,45,0	1/1:1,18:19:51.10:519,51,0	1/1:3,11:15:32.78:317,33,0	1/1:0,17:17:39.09:397,39,0	1/1:3,17:21:20.59:455,21,0	0/0:12,1:13:8.61:0,9,506	1/1:4,34:39:99:1049,105,0	0/0:3,0:30:66.08:0,66,627	1/1:3,15:19:38.79:441,39,0	1/1:3,22:25:57.10:580,57,0	1/1:4,14:19:38.81:378,39,0	1/1:3,14:17:42.05:417,42,0	1/1:4,16:21:47.82:469,48,0	1/1:1,6:7:15.03:153,15,0	1/1:2,13:15:33.02:336,33,0	0/0:22,0:24:9.99:0,10,412	1/1:2,23:25:54.09:548,54,0	0/0:6,0:6:11.99:0,12,108
chr10	99186981	.	ACT	A	1444.37	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.894;DP=620;FS=0.000;HRun=0;HaplotypeScore=72.0975;InbreedingCoeff=0.9865;MQ=60.30;MQ0=2;MQRankSum=3.140;QD=35.23;ReadPosRankSum=1.474;VQSLOD=5.3619;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,39:41:99:1539,105,0	0/0:7,0:7:18.06:0,18,337	0/0:8,0:7:21.07:0,21,393	0/0:15,0:11:25.25:0,25,504	0/0:25,0:25:69.23:0,69,1245	0/0:23,0:23:66.20:0,66,1193	0/0:22,0:22:63.22:0,63,1172	0/0:25,0:25:72.24:0,72,1307	0/0:15,0:15:45.14:0,45,805	0/0:18,0:18:54.19:0,54,1011	0/0:20,0:20:57.19:0,57,1037	0/0:25,0:25:75.26:0,75,1388	0/0:25,0:24:72.25:0,72,1340	0/0:23,0:23:69.22:0,69,1248	0/0:24,0:24:69.22:0,69,1261	0/0:23,0:23:69.24:0,69,1287	0/0:44,0:44:99:0,126,2350	0/0:32,0:32:93.32:0,93,1703	0/0:23,0:22:66.23:0,66,1209	0/0:22,0:22:60.21:0,60,1115	0/0:34,0:34:99:0,102,1907	0/0:18,0:18:48.15:0,48,862	0/0:20,0:20:60.21:0,60,1105	0/0:21,0:21:63.22:0,63,1171	0/0:16,0:16:48.13:0,48,855	0/0:20,0:20:60.21:0,60,1118	0/0:19,0:19:57.20:0,57,1068	0/0:12,0:12:36.12:0,36,674
chr10	99187129	.	AGT	A	16218.40	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=9.517;DP=623;FS=4.124;HRun=0;HaplotypeScore=88.2475;InbreedingCoeff=0.9568;MQ=60.33;MQ0=5;MQRankSum=0.745;QD=35.96;ReadPosRankSum=5.774;VQSLOD=7.1893;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,123,2247	1/1:1,8:9:18.06:258,18,0	0/0:23,0:19:27.63:0,28,878	0/0:23,0:20:54.17:0,54,957	1/1:0,19:19:54.11:746,54,0	1/1:1,15:16:39.06:533,39,0	1/1:1,39:40:99:1413,99,0	0/0:26,0:26:69.23:0,69,1225	1/1:0,20:20:57.14:791,57,0	1/1:2,24:25:72.24:1031,72,0	1/1:1,14:15:36.12:515,36,0	1/1:0,18:18:48.16:687,48,0	1/1:0,21:21:53.95:772,54,0	1/1:1,18:18:39.13:558,39,0	1/1:3,25:27:63.21:902,63,0	0/0:29,2:31:1.33:0,1,1388	1/1:1,24:25:75.15:1025,75,0	1/1:2,28:30:81.07:1160,81,0	1/1:0,15:12:36.11:500,36,0	1/1:2,18:20:45.15:644,45,0	1/1:2,27:28:69.23:988,69,0	1/1:0,19:18:51.17:730,51,0	1/1:1,19:19:48.11:663,48,0	1/1:0,21:21:60.09:811,60,0	1/1:0,18:18:51.07:677,51,0	0/0:14,0:14:42.14:0,42,760	1/1:2,20:22:57.19:816,57,0	0/0:9,0:9:27.09:0,27,494
chr10	99187759	.	C	CT	6193.95	PASS	AB=0.857;AC=43;AF=0.768;AN=56;BaseQRankSum=1.865;DP=284;FS=0.541;HRun=7;HaplotypeScore=35.8202;InbreedingCoeff=0.8272;MQ=70.19;MQ0=0;MQRankSum=-4.359;QD=30.51;ReadPosRankSum=1.374;VQSLOD=4.7357;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.11:0,75,724	1/1:0,7:7:21.06:253,21,0	0/0:12,0:11:33.05:0,33,319	0/0:10,0:8:14.19:0,14,111	1/1:0,10:10:30.09:362,30,0	1/1:1,17:18:51.09:597,51,0	1/1:1,7:8:15.05:181,15,0	0/0:19,0:19:48.07:0,48,463	1/1:0,6:6:18.06:217,18,0	1/1:0,8:8:24.07:290,24,0	1/1:0,11:11:30.06:347,30,0	1/1:1,7:8:21.02:237,21,0	1/1:0,4:4:12.04:145,12,0	1/1:0,9:9:27.08:326,27,0	1/1:0,6:6:15.05:181,15,0	0/0:9,0:9:23.96:0,24,214	1/1:1,15:16:30.09:362,30,0	1/1:2,13:15:36.11:432,36,0	1/1:0,13:13:36.11:435,36,0	1/1:1,8:9:24.07:290,24,0	1/1:1,10:11:27.08:326,27,0	1/1:2,1:3:3.01:36,3,0	1/1:0,6:6:18.06:217,18,0	1/1:0,7:7:21.06:254,21,0	1/1:1,10:11:30.09:362,30,0	0/1:5,1:6:18.21:18,0,127	1/1:0,11:11:27.08:326,27,0	0/0:2,0:2:6.01:0,6,58
chr10	99187853	.	T	TG	407.67	PASS	AC=32;AF=0.941;AN=34;BaseQRankSum=-2.232;DP=46;FS=3.128;HRun=1;HaplotypeScore=38.5614;InbreedingCoeff=0.1391;MQ=73.72;MQ0=0;MQRankSum=1.354;QD=9.71;ReadPosRankSum=-1.793;VQSLOD=0.7476;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:12.62:81,13,0	1/1:1,0:1:2.98:21,3,0	1/1:3,0:3:7.07:36,7,0	./.	1/1:0,2:2:5.72:30,6,0	./.	1/1:3,1:4:8.74:54,9,0	./.	./.	./.	1/1:0,1:1:2.74:12,3,0	./.	./.	./.	1/1:2,0:2:2.80:13,3,0	1/1:2,0:2:2.80:13,3,0	1/1:2,1:3:5.77:33,6,0	1/1:3,2:5:8.78:55,9,0	1/1:3,1:4:10.47:46,10,0	1/1:0,1:1:2.94:18,3,0	0/0:2,0:2:2.80:0,3,13	./.	1/1:1,0:1:2.97:20,3,0	1/1:2,0:2:5.81:34,6,0	./.	1/1:0,1:1:2.74:12,3,0	1/1:0,1:1:2.80:13,3,0	./.
chr10	99188358	.	A	AG	386.80	PASS	AC=14;AF=0.778;AN=18;BaseQRankSum=-2.012;DP=128;FS=0.000;HRun=0;HaplotypeScore=18.2785;MQ=10.88;MQ0=110;MQRankSum=0.373;QD=11.38;ReadPosRankSum=-0.075;VQSLOD=2.8505;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	1/1:0,6:6:17.99:184,18,0	1/1:5,2:2:6.02:70,6,0	./.	1/1:4,1:1:3.01:33,3,0	./.	1/1:2,2:2:2.36:13,2,0	./.	./.	1/1:2,3:3:9.03:101,9,0	1/1:3,1:1:3.01:35,3,0	0/0:1,0:1:2.97:0,3,20	./.	./.	./.	./.	1/1:2,1:1:3.01:34,3,0	./.	0/0:3,0:1:2.04:0,2,6	./.	./.	./.	./.	./.
chr10	99188412	.	T	TCCCG	539.39	PASS	AC=8;AF=1.00;AN=8;DP=61;FS=0.000;HRun=0;HaplotypeScore=34.1940;MQ=20.94;MQ0=34;QD=16.86;VQSLOD=2.4595;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,6:9:11.51:287,12,0	./.	./.	./.	./.	./.	./.	1/1:10,1:5:14.84:253,15,0	./.	./.	./.	./.	./.	./.	./.	1/1:2,1:3:1.82:5,2,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:4,0:3:3.01:62,3,0
chr10	99189321	.	T	TG	19708.25	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=17.243;DP=742;FS=8.418;HRun=3;HaplotypeScore=175.2232;InbreedingCoeff=0.9999;MQ=80.17;MQ0=0;MQRankSum=-7.125;QD=36.50;ReadPosRankSum=4.724;VQSLOD=2.7966;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:90.27:0,90,1080	1/1:1,10:11:30.10:416,30,0	0/0:24,0:24:72.16:0,72,827	0/0:21,0:21:60.15:0,60,691	1/1:1,26:27:78.17:1062,78,0	1/1:1,23:24:60.20:832,60,0	1/1:1,20:21:54.18:756,54,0	0/0:41,0:41:99:0,114,1351	1/1:2,28:30:78.26:1086,78,0	1/1:1,37:38:99:1473,108,0	1/1:1,20:21:57.19:793,57,0	1/1:3,20:23:60.09:793,60,0	1/1:1,30:31:93.31:1296,93,0	1/1:1,26:27:75.25:1050,75,0	1/1:3,39:42:99:1541,111,0	0/0:25,0:25:72.14:0,72,823	1/1:3,20:23:54.18:756,54,0	1/1:2,15:17:45.15:627,45,0	1/1:2,19:21:57.19:798,57,0	1/1:1,19:20:51.13:681,51,0	1/1:2,32:34:87.25:1196,87,0	1/1:3,19:22:50.93:641,51,0	1/1:3,17:20:45.11:623,45,0	1/1:2,23:25:63.17:860,63,0	1/1:1,32:33:87.29:1210,87,0	0/0:37,1:38:66.28:0,66,1187	1/1:0,30:30:87.29:1217,87,0	0/0:18,0:18:54.17:0,54,648
chr10	99189366	.	A	AT	2460.53	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-11.907;DP=689;FS=4.109;HRun=8;HaplotypeScore=232.7985;InbreedingCoeff=0.9974;MQ=79.06;MQ0=0;MQRankSum=-0.233;QD=27.04;ReadPosRankSum=-2.841;VQSLOD=-0.1057;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:95.99:0,96,861	0/0:11,0:11:30.02:0,30,275	0/0:24,0:24:21.96:0,22,326	0/0:19,0:19:29.98:0,30,272	0/0:30,0:30:78.01:0,78,709	0/0:29,0:29:84.05:0,84,769	0/0:17,0:17:39.01:0,39,357	1/1:3,38:41:99:1305,114,0	0/0:21,0:21:54.01:0,54,494	0/0:28,0:28:72:0,72,653	0/0:21,0:21:51.02:0,51,467	0/0:21,0:21:60.03:0,60,549	0/0:30,0:30:81.02:0,81,737	0/0:24,0:24:60.01:0,60,544	0/0:25,0:25:54.01:0,54,494	0/0:29,0:29:87.05:0,87,796	0/0:27,0:28:71.04:0,71,630	1/1:6,12:18:36.11:415,36,0	0/0:14,0:14:30.01:0,30,275	0/0:34,0:34:87.03:0,87,796	0/0:31,0:31:78.04:0,78,714	0/0:17,0:18:47.05:0,47,418	0/0:22,0:22:60.03:0,60,549	0/0:21,0:22:56.06:0,56,500	0/0:38,0:38:90.04:0,90,824	1/1:6,19:25:57.17:658,57,0	0/0:26,0:26:54.01:0,54,494	1/1:0,7:7:21.06:242,21,0
chr10	99189867	.	G	GA	20244.57	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-5.197;DP=695;FS=4.794;HRun=1;HaplotypeScore=88.1388;InbreedingCoeff=0.9997;MQ=79.79;MQ0=0;MQRankSum=-5.022;QD=40.82;ReadPosRankSum=4.627;VQSLOD=5.2585;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:37:88.34:0,88,1324	1/1:0,14:14:39.13:585,39,0	0/0:30,0:28:69.13:0,69,860	0/0:17,0:17:44.75:0,45,557	1/1:0,25:25:72.24:1079,72,0	1/1:1,25:26:63.21:944,63,0	1/1:0,18:18:36.12:540,36,0	0/0:43,0:43:99:0,126,1562	1/1:2,11:13:27.09:405,27,0	1/1:0,22:21:63.20:925,63,0	1/1:0,19:19:57.19:854,57,0	1/1:0,24:25:69.23:1020,69,0	1/1:0,31:31:93.32:1394,93,0	1/1:1,22:23:66.22:989,66,0	1/1:0,21:21:60.10:899,60,0	0/0:29,0:29:78.23:0,78,987	1/1:0,30:30:87.29:1304,87,0	1/1:0,16:16:42.14:629,42,0	1/1:4,15:19:45.15:675,45,0	1/1:1,26:27:72.24:1079,72,0	1/1:0,28:27:78.26:1169,78,0	1/1:0,30:30:87.29:1302,87,0	1/1:1,28:29:78.26:1169,78,0	1/1:0,25:24:63.21:944,63,0	1/1:0,23:23:63.21:945,63,0	0/0:31,0:31:87.28:0,87,1130	1/1:1,31:32:93.32:1394,93,0	0/0:12,0:12:33.11:0,33,427
chr10	99190879	.	C	CAAAG	6901.58	PASS	AB=0.965;AC=42;AF=0.750;AN=56;BaseQRankSum=3.467;DP=444;FS=14.969;HRun=0;HaplotypeScore=139.6655;InbreedingCoeff=0.4370;MQ=64.33;MQ0=8;MQRankSum=-1.447;QD=18.16;ReadPosRankSum=2.456;VQSLOD=3.6312;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:15.82:0,16,147	1/1:6,2:8:19.96:234,20,0	0/0:28,0:11:23.40:0,23,279	0/1:25,0:13:10.82:11,0,179	1/1:22,1:23:37.60:301,38,0	1/1:3,4:14:10.22:190,10,0	1/1:16,1:17:41.01:436,41,0	0/1:11,0:10:24.72:25,0,42	1/1:18,3:21:17.51:411,18,0	0/1:16,1:17:24.15:296,0,24	1/1:12,1:13:9.56:287,10,0	1/1:12,4:16:38.73:556,39,0	1/1:2,4:7:18.04:340,18,0	1/1:2,12:16:19.74:379,20,0	1/1:12,4:17:38.28:510,38,0	0/0:14,0:14:32.70:0,33,527	1/1:11,3:15:7.76:269,8,0	0/1:8,0:6:9.80:10,0,43	1/1:11,0:11:4.62:116,5,0	1/1:14,4:18:42.46:586,42,0	1/1:14,1:15:21.86:181,22,0	1/1:6,6:15:24.38:256,24,0	1/1:21,2:24:11.45:376,11,0	0/1:21,1:24:37.38:196,0,37	1/1:8,3:10:19.19:217,19,0	0/1:11,0:11:2.51:3,0,278	1/1:15,5:21:54.18:717,54,0	0/0:7,0:7:17.93:0,18,255
chr10	99190881	.	C	CAAAGAG	16652.66	PASS	AB=0.985;AC=48;AF=0.857;AN=56;BaseQRankSum=2.438;DP=577;FS=5.901;HRun=0;HaplotypeScore=209.2371;InbreedingCoeff=0.3143;MQ=57.47;MQ0=8;MQRankSum=-2.754;QD=31.24;ReadPosRankSum=-0.250;VQSLOD=4.1627;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:49.27:89,0,49	1/1:13,0:14:38.48:828,38,0	0/0:27,0:11:7.91:0,8,93	0/1:27,0:13:22.52:23,0,130	1/1:26,1:27:60.07:633,60,0	1/1:15,0:15:26.05:487,26,0	1/1:20,1:20:57.45:749,57,0	1/1:17,0:15:0.73:376,1,0	1/1:25,0:26:67.82:913,68,0	1/1:24,0:22:42.59:881,43,0	1/1:14,1:17:9.02:625,9,0	1/1:17,1:18:48.82:780,49,0	1/1:13,0:12:33.92:823,34,0	1/1:17,0:17:28.06:797,28,0	1/1:19,1:20:47.23:945,47,0	0/0:16,0:16:8.83:0,9,168	1/1:18,0:18:33.90:623,34,0	1/1:12,0:10:24.06:394,24,0	1/1:19,0:20:57.57:834,58,0	1/1:20,0:20:47.41:786,47,0	1/1:18,0:19:26.93:275,27,0	1/1:19,0:17:34.75:412,35,0	1/1:32,1:33:62.10:904,62,0	1/1:27,0:27:8.88:380,9,0	1/1:19,0:18:36.01:779,36,0	0/1:18,0:18:15.90:585,0,16	1/1:24,1:26:72.76:1287,73,0	0/1:15,0:15:15.56:444,0,16
chr10	99193367	.	AAG	A	304.85	PASS	AB=0.984;AC=17;AF=0.315;AN=54;BaseQRankSum=4.809;DP=424;FS=30.063;HRun=0;HaplotypeScore=85.2285;InbreedingCoeff=-0.1567;MQ=30.31;MQ0=55;MQRankSum=0.373;QD=1.34;ReadPosRankSum=0.068;VQSLOD=0.0552;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:17:19.43:0,19,229	0/0:4,0:3:3.94:0,4,25	0/0:31,0:1:0.89:0,1,2	0/0:45,0:6:4.35:0,4,22	0/1:24,1:22:9.93:10,0,96	0/0:8,0:8:3.36:0,3,51	0/1:14,0:14:1.79:2,0,43	0/0:26,0:23:10.31:0,10,145	0/1:11,0:11:23.86:24,0,43	0/0:14,1:14:14.81:0,15,65	0/0:9,1:9:2.99:0,3,66	0/1:12,1:10:12.73:40,0,13	1/1:10,0:8:11.56:77,12,0	0/1:8,1:7:8.54:38,0,9	0/1:13,0:12:7.78:8,0,20	0/0:11,0:9:20.42:0,20,183	0/1:20,0:17:15.80:51,0,16	0/1:16,0:13:17.15:61,0,17	0/1:24,0:18:40.19:40,0,110	1/1:14,1:13:6.52:24,7,0	0/0:9,1:8:2.14:0,2,43	./.	0/0:6,0:5:4.39:0,4,44	0/1:11,0:11:30.77:31,0,46	0/0:10,0:10:1.08:0,1,55	0/1:20,0:17:19.78:20,0,44	0/1:15,0:14:17.59:22,0,18	0/1:11,0:1:0:0,0,0
chr10	99193369	.	GAAA	G	5037.29	PASS	AB=0.784;AC=40;AF=0.741;AN=54;BaseQRankSum=-2.175;DP=443;FS=3.490;HRun=14;HaplotypeScore=79.1933;InbreedingCoeff=0.5120;MQ=30.11;MQ0=57;MQRankSum=-0.930;QD=16.20;ReadPosRankSum=3.313;VQSLOD=3.9797;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:16:34.28:0,34,299	1/1:2,2:3:6.01:70,6,0	0/0:36,0:3:6.19:0,6,30	0/0:50,0:6:10.50:0,10,74	1/1:12,13:22:36.02:406,36,0	1/1:6,2:8:8.88:86,9,0	1/1:8,5:13:14.66:134,15,0	0/1:22,0:25:30.51:131,0,31	1/1:3,8:11:26.99:276,27,0	1/1:6,9:14:36.08:411,36,0	0/1:8,3:10:17.36:138,0,17	1/1:7,6:10:23.09:227,23,0	1/1:7,4:9:26.94:278,27,0	1/1:6,4:8:18.04:209,18,0	1/1:7,7:13:36.10:414,36,0	0/0:10,0:9:24.04:0,24,357	1/1:17,5:18:24.95:310,25,0	0/1:11,1:12:38.09:49,0,38	0/1:16,9:20:6.16:376,0,6	1/1:4,10:13:27.08:313,27,0	1/1:5,3:7:3.43:36,3,0	./.	1/1:3,3:5:8.92:87,9,0	1/1:7,4:11:20.58:214,21,0	1/1:3,6:9:21.04:245,21,0	1/1:12,1:18:35.48:236,35,0	1/1:6,9:14:38.85:392,39,0	0/0:15,0:5:6.01:0,6,17
chr10	99193373	.	A	AG	66.16	PASS	AB=0.965;AC=8;AF=0.148;AN=54;BaseQRankSum=2.360;DP=466;FS=0.000;HRun=0;HaplotypeScore=93.4865;InbreedingCoeff=0.0842;MQ=30.73;MQ0=56;MQRankSum=0.990;QD=0.57;ReadPosRankSum=-4.995;VQSLOD=0.0968;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:17:1.15:0,1,117	0/0:3,0:2:5.95:0,6,43	0/0:38,0:3:5.72:0,6,30	0/0:57,0:7:12.58:0,13,91	0/0:23,0:20:31.54:0,32,218	0/1:8,0:8:4.40:4,0,88	0/1:12,0:12:3.57:4,0,81	0/1:33,2:31:10.36:10,0,196	0/1:10,1:11:18.59:19,0,77	0/0:14,0:13:11.83:0,12,130	0/1:12,1:12:9.53:10,0,162	0/0:13,0:10:24.25:0,24,173	0/0:12,0:10:15.19:0,15,139	0/0:11,1:10:19.17:0,19,146	0/0:14,0:13:13.06:0,13,142	0/0:11,0:9:16.73:0,17,244	0/0:24,0:20:18.70:0,19,201	0/0:15,0:13:13.96:0,14,154	0/0:26,0:21:42.71:0,43,337	0/0:16,0:14:19.67:0,20,140	0/0:9,0:7:8.97:0,9,73	./.	0/0:8,0:7:19.05:0,19,113	0/0:11,0:11:28.25:0,28,199	0/0:8,0:8:15.33:0,15,141	0/1:22,0:19:40.93:41,0,145	0/0:15,0:14:32.29:0,32,237	1/1:14,1:5:14.85:105,15,0
chr10	99193390	.	AAAAG	A	3725.22	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=0.586;DP=546;FS=2.541;HRun=0;HaplotypeScore=115.8317;InbreedingCoeff=0.2152;MQ=44.31;MQ0=52;MQRankSum=2.383;QD=10.26;ReadPosRankSum=1.809;VQSLOD=3.1009;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:35.82:36,0,104	1/1:5,0:5:14.34:116,14,0	0/0:70,0:9:17.92:0,18,138	0/0:87,0:17:17.87:0,18,323	1/1:20,0:19:26.34:288,26,0	1/1:5,1:6:12:125,12,0	1/1:11,1:12:15.34:123,15,0	1/1:44,2:42:7.04:244,7,0	1/1:14,0:14:11.93:227,12,0	1/1:19,0:19:24.60:292,25,0	0/1:15,0:14:15.52:143,0,16	1/1:9,0:7:15.79:118,16,0	1/1:15,0:14:36.38:271,36,0	1/1:12,0:12:14.36:183,14,0	1/1:14,0:14:21.99:177,22,0	0/0:11,0:11:30:0,30,483	0/1:27,0:24:23.72:188,0,24	0/0:14,0:13:2.65:0,3,80	0/1:23,0:21:47.84:225,0,48	0/1:19,0:17:27.78:111,0,28	0/1:8,0:7:15.60:44,0,16	1/1:3,0:2:5.38:42,5,0	1/1:11,0:10:18.95:168,19,0	0/1:11,0:11:47.14:135,0,47	1/1:7,0:7:8.23:111,8,0	1/1:21,0:20:21.44:154,21,0	0/1:15,0:15:7.57:167,0,8	1/1:14,0:6:9.75:40,10,0
chr10	99193394	.	G	GA	6346.11	PASS	AB=0.748;AC=42;AF=0.750;AN=56;BaseQRankSum=-6.477;DP=563;FS=0.655;HRun=9;HaplotypeScore=93.7272;InbreedingCoeff=0.5314;MQ=47.90;MQ0=45;MQRankSum=1.194;QD=17.48;ReadPosRankSum=0.224;VQSLOD=4.7115;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,1:17:10.63:82,11,0	1/1:0,5:5:15.04:166,15,0	0/0:74,0:10:1.67:0,2,46	0/0:90,0:19:20.62:0,21,220	1/1:3,18:20:31.73:447,32,0	1/1:7,2:9:18.01:180,18,0	1/1:7,5:12:20.76:194,21,0	0/1:47,0:43:31.58:76,0,32	1/1:2,13:15:13.48:372,13,0	1/1:3,19:22:59.98:636,60,0	1/1:5,11:15:7:282,7,0	1/1:2,8:8:18.52:200,19,0	1/1:2,15:16:38.93:424,39,0	1/1:2,10:12:33.09:363,33,0	1/1:3,11:14:33.09:364,33,0	0/0:10,1:11:26.32:0,26,210	1/1:10,18:25:20.45:411,20,0	0/0:13,0:12:15.08:0,15,71	1/1:9,15:22:25.64:503,26,0	1/1:9,10:17:7.05:305,7,0	0/1:2,5:7:8.59:118,0,9	1/1:0,3:3:6.02:66,6,0	1/1:1,11:11:27.07:296,27,0	0/1:2,10:12:5:175,0,5	1/1:1,6:7:18.05:199,18,0	0/1:16,3:18:3.67:95,0,4	1/1:4,11:15:38.98:392,39,0	0/0:11,0:6:5.15:0,5,12
chr10	99193399	.	AAAAAG	A	983.12	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=0.588;DP=579;FS=4.719;HRun=0;HaplotypeScore=146.0182;InbreedingCoeff=0.7375;MQ=49.12;MQ0=39;MQRankSum=0.436;QD=8.94;ReadPosRankSum=-0.577;VQSLOD=2.3555;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:1.65:47,0,2	0/0:5,0:5:15.05:0,15,220	0/0:75,0:13:20.76:0,21,167	0/0:86,0:19:19.39:0,19,294	0/0:22,0:21:51.14:0,51,675	0/0:10,0:10:24.06:0,24,332	0/0:14,0:14:30.06:0,30,387	1/1:49,0:45:81.59:528,82,0	0/0:15,0:15:40.86:0,41,535	0/0:22,0:22:60.16:0,60,874	0/0:20,0:19:39.10:0,39,581	0/0:10,0:8:18.02:0,18,248	0/0:16,0:16:37.06:0,37,543	0/0:14,0:14:33.08:0,33,487	0/0:16,0:16:36.10:0,36,576	0/0:10,0:10:24.08:0,24,512	0/0:26,0:24:48.14:0,48,741	1/1:3,10:13:15.05:252,15,0	0/0:26,0:24:47.24:0,47,725	0/0:19,0:17:33.11:0,33,554	0/0:7,0:7:15.01:0,15,214	0/0:3,0:3:9.03:0,9,136	0/0:13,0:12:30.10:0,30,470	0/0:11,0:11:15.51:0,16,217	0/0:8,0:8:21.01:0,21,257	0/1:20,0:19:57.73:210,0,58	0/0:18,0:18:48.13:0,48,703	1/1:10,0:8:14.78:97,15,0
chr10	99193400	.	AAAAG	A	2635.15	PASS	AB=0.941;AC=13;AF=0.232;AN=56;BaseQRankSum=-3.348;DP=581;FS=4.633;HRun=0;HaplotypeScore=131.5961;InbreedingCoeff=0.2136;MQ=49.41;MQ0=39;MQRankSum=-1.719;QD=13.72;ReadPosRankSum=-1.195;VQSLOD=3.0053;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,13:18:5.21:209,5,0	0/0:5,0:5:14.85:0,15,121	0/0:74,0:13:23.51:0,24,187	0/0:87,0:19:27.50:0,27,451	0/0:22,0:21:44.93:0,45,360	0/0:10,0:10:20.58:0,21,212	0/0:13,0:13:24.49:0,24,227	1/1:17,32:45:50.48:1409,50,0	0/0:15,0:15:13.07:0,13,250	0/0:23,0:23:47.46:0,47,494	0/1:20,0:19:4.99:5,0,392	0/1:10,0:8:26.03:26,0,116	0/0:17,0:16:4.55:0,5,247	0/1:14,0:14:26.76:27,0,261	0/0:16,0:16:3.08:0,3,334	0/0:10,0:10:27.08:0,27,554	0/0:28,0:25:46.11:0,46,483	0/1:13,0:13:8.02:124,0,8	0/1:26,0:24:40.82:41,0,436	0/0:19,0:17:3.85:0,4,364	0/0:7,0:7:1.53:0,2,128	0/0:3,0:3:8.99:0,9,100	0/0:14,0:13:31.38:0,31,298	0/1:12,0:12:43.91:44,0,116	0/0:8,0:8:6.72:0,7,105	0/1:6,14:19:8.15:647,0,8	0/0:18,0:18:35.59:0,36,368	1/1:2,8:8:15.05:263,15,0
chr10	99194462	.	CATCTAGGCCCAGGGGAAT	C	4029.48	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.373;DP=651;FS=3.499;HRun=0;HaplotypeScore=304.5493;InbreedingCoeff=0.9978;MQ=88.03;MQ0=0;MQRankSum=-8.863;QD=122.11;ReadPosRankSum=1.636;VQSLOD=3.2104;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:33:81.28:4029,81,0	0/0:13,0:13:39.13:0,39,3220	0/0:24,0:24:72.08:0,72,4127	0/0:23,0:23:66.22:0,66,4193	0/0:22,0:22:63.22:0,63,4982	0/0:29,0:29:87.25:0,87,6491	0/0:20,0:20:60.21:0,60,4508	0/0:29,0:29:81.28:0,81,6048	0/0:20,0:20:60.18:0,60,4979	0/0:23,0:23:69.24:0,69,5609	0/0:18,0:18:54.19:0,54,4484	0/0:28,0:28:81.28:0,81,6630	0/0:27,0:27:56.37:0,56,5980	0/0:28,0:28:84.26:0,84,6125	0/0:21,0:21:63.22:0,63,4938	0/0:26,0:26:78.27:0,78,5808	0/0:25,0:25:75.26:0,75,6437	0/0:22,0:21:63.22:0,63,5099	0/0:24,0:24:69.24:0,69,4710	0/0:30,0:30:87.30:0,87,7136	0/0:25,0:25:66.21:0,66,5246	0/0:14,0:14:42.14:0,42,3230	0/0:14,0:14:39.13:0,39,3387	0/0:23,0:23:69.24:0,69,5732	0/0:20,0:20:54.19:0,54,3989	0/0:22,0:22:63.21:0,63,4974	0/0:40,0:39:99:0,120,9022	0/0:8,0:8:24.08:0,24,1994
chr10	99196590	.	AC	A	403.96	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.389;DP=810;FS=0.000;HRun=1;HaplotypeScore=74.0888;InbreedingCoeff=0.9963;MQ=86.82;MQ0=0;MQRankSum=-2.403;QD=33.66;ReadPosRankSum=0.173;VQSLOD=3.3111;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,2259	0/0:13,0:13:39.10:0,39,576	0/0:22,1:23:22.39:0,22,890	0/0:30,0:30:84.28:0,84,1296	0/0:22,0:22:66.20:0,66,1019	0/0:18,0:18:51.17:0,51,810	0/0:45,0:45:99:0,135,2070	0/0:40,0:40:99:0,120,1866	0/0:28,0:28:84.29:0,84,1343	0/0:30,0:30:90.30:0,90,1419	0/0:20,0:20:60.20:0,60,959	0/0:39,0:39:99:0,117,1870	0/0:38,0:38:99:0,114,1798	0/0:29,0:29:87.30:0,87,1390	0/0:38,0:38:99:0,114,1813	0/0:42,0:42:99:0,126,1965	0/0:37,0:37:99:0,111,1695	1/1:0,12:12:36.12:499,36,0	0/0:19,0:19:57.19:0,57,911	0/0:25,0:25:75.26:0,75,1199	0/0:59,0:59:99:0,178,2791	0/0:27,0:27:81.26:0,81,1270	0/0:20,0:20:60.20:0,60,949	0/0:30,0:30:90.25:0,90,1379	0/0:15,0:15:42.14:0,42,671	0/0:27,0:27:81.28:0,81,1295	0/0:25,0:25:75.22:0,75,1150	0/0:11,0:11:30.10:0,30,480
chr10	99197891	.	T	TCC	261.21	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.641;DP=536;FS=0.000;HRun=7;HaplotypeScore=65.5003;InbreedingCoeff=0.9731;MQ=68.73;MQ0=0;MQRankSum=-1.503;QD=17.41;ReadPosRankSum=-0.088;VQSLOD=0.6223;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:54.14:0,54,616	0/0:11,0:11:30.09:0,30,349	0/0:16,0:14:29.68:0,30,286	0/0:14,0:9:14.60:0,15,156	0/0:25,0:25:54.14:0,54,628	0/0:23,0:23:63.18:0,63,733	0/0:12,0:12:33.08:0,33,374	0/0:15,0:15:24.06:0,24,279	0/0:21,0:21:60.18:0,60,698	0/0:17,0:17:51.15:0,51,594	0/0:26,0:26:66.19:0,66,764	0/0:15,0:15:39.10:0,39,444	0/0:20,0:20:51.14:0,51,592	0/0:27,0:27:63.12:0,63,701	0/0:17,0:17:45.11:0,45,514	0/0:17,0:17:42.11:0,42,489	0/0:26,0:26:69.09:0,69,750	1/1:4,11:15:23.82:354,24,0	0/0:15,0:15:45.13:0,45,524	0/0:28,0:28:78.22:0,78,907	0/0:9,0:9:21.06:0,21,245	0/0:14,0:14:36.09:0,36,409	0/0:21,0:21:57.16:0,57,663	0/0:27,0:27:66.16:0,66,757	0/0:22,0:22:54.13:0,54,627	0/0:14,0:14:33.09:0,33,384	0/0:25,0:25:69.20:0,69,799	0/0:21,0:21:57.14:0,57,652
chr10	99198351	.	A	ATT	679.20	PASS	AB=0.972;AC=4;AF=0.071;AN=56;BaseQRankSum=-4.119;DP=550;FS=7.989;HRun=8;HaplotypeScore=78.7929;InbreedingCoeff=0.4642;MQ=76.04;MQ0=1;MQRankSum=-0.103;QD=13.06;ReadPosRankSum=0.145;VQSLOD=0.4541;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:39.07:0,39,423	0/0:9,0:9:27.07:0,27,301	0/1:13,0:11:20.74:21,0,156	0/1:16,0:17:7.77:8,0,190	0/0:31,0:31:78.17:0,78,860	0/0:22,0:22:60.15:0,60,669	0/0:20,0:20:60.16:0,60,669	0/0:23,0:23:60.15:0,60,668	0/0:18,0:18:48.13:0,48,535	0/0:27,0:27:75.19:0,75,829	0/0:25,0:25:75.19:0,75,827	0/0:19,0:19:57.15:0,57,635	0/0:17,0:17:45.12:0,45,502	0/0:11,0:11:27.06:0,27,301	0/0:31,0:31:78.18:0,78,869	0/0:13,0:13:39.11:0,39,435	0/0:23,0:22:60.15:0,60,669	1/1:2,20:22:48.16:762,48,0	0/0:24,0:24:57.13:0,57,635	0/0:21,0:21:60.16:0,60,669	0/0:12,0:12:30.07:0,30,334	0/0:17,0:17:42.09:0,42,468	0/0:23,0:23:60.15:0,60,668	0/0:7,0:7:18.04:0,18,201	0/0:27,0:27:75.20:0,75,836	0/0:24,0:24:60.14:0,60,669	0/0:31,0:31:78.17:0,78,860	0/0:7,0:7:8.98:0,9,78
chr10	99198927	.	TACAC	T	10830.24	PASS	AB=0.793;AC=40;AF=0.714;AN=56;BaseQRankSum=-8.577;DP=861;FS=8.497;HRun=0;HaplotypeScore=187.9065;InbreedingCoeff=0.7827;MQ=66.97;MQ0=11;MQRankSum=5.276;QD=17.16;ReadPosRankSum=7.616;VQSLOD=2.7658;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:43:13.24:0,13,129	1/1:1,5:8:12:145,12,0	0/0:41,0:22:6.02:0,6,133	0/0:44,0:30:20.77:0,21,260	1/1:9,18:27:21.07:338,21,0	1/1:16,22:41:20.08:677,20,0	1/1:10,22:33:8.02:591,8,0	0/0:39,0:36:50.78:0,51,646	1/1:10,20:32:25.61:591,26,0	1/1:17,25:42:9.79:860,10,0	0/1:5,11:16:1.75:266,0,2	1/1:14,16:33:16.20:453,16,0	1/1:9,22:33:42.03:653,42,0	1/1:5,24:30:44.10:825,44,0	1/1:16,26:42:51.17:809,51,0	0/0:7,0:37:52.41:0,52,861	1/1:7,24:31:48.13:772,48,0	0/0:15,0:15:24.08:0,24,397	1/1:9,7:16:24.03:296,24,0	1/1:14,10:25:1.79:242,2,0	1/1:20,21:41:30.09:462,30,0	1/1:6,19:25:27.09:434,27,0	1/1:8,24:33:39.16:587,39,0	1/1:14,29:45:63.20:994,63,0	1/1:7,12:21:33.10:490,33,0	0/1:20,0:20:9.06:9,0,420	1/1:16,16:32:19.32:335,19,0	0/0:10,0:10:23.43:0,23,284
chr10	99198957	.	C	CAT	243.53	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=4.553;DP=808;FS=0.000;HRun=0;HaplotypeScore=183.6054;InbreedingCoeff=0.5337;MQ=61.89;MQ0=7;MQRankSum=0.038;QD=4.78;ReadPosRankSum=1.382;VQSLOD=2.3470;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:22.88:0,23,271	0/0:7,0:7:8.83:0,9,69	0/0:30,0:17:44.04:0,44,483	0/0:33,0:19:28.75:0,29,451	0/0:21,0:21:29.90:0,30,236	0/0:39,0:39:83.75:0,84,665	0/0:31,0:31:62.81:0,63,501	0/0:42,0:39:44.71:0,45,671	0/0:33,0:33:66.27:0,66,522	0/0:42,0:42:99:0,106,890	0/0:19,0:20:35.83:0,36,288	0/0:30,0:30:50.67:0,51,402	0/0:29,0:29:56.45:0,56,428	0/0:29,0:29:62.78:0,63,506	0/0:36,0:36:77.77:0,78,625	0/1:36,0:36:57.17:57,0,107	0/0:34,0:34:74.63:0,75,589	1/1:3,12:15:16.53:289,17,0	0/0:25,0:24:68.51:0,69,588	0/0:24,0:23:44.89:0,45,362	0/0:37,0:37:56.84:0,57,455	0/0:28,0:28:53.81:0,54,422	0/0:34,0:34:59.06:0,59,474	0/0:41,0:41:83.71:0,84,660	0/0:16,0:16:32.87:0,33,255	0/0:17,0:17:3.02:0,3,197	0/0:29,0:29:56.70:0,57,444	0/0:9,0:9:13.61:0,14,88
chr10	99199314	.	GAGAAGA	G	4698.49	PASS	AB=1.000;AC=39;AF=0.780;AN=50;BaseQRankSum=4.577;DP=601;FS=2.603;HRun=0;HaplotypeScore=121.5606;InbreedingCoeff=0.1545;MQ=49.54;MQ0=23;MQRankSum=1.652;QD=9.95;ReadPosRankSum=-1.168;VQSLOD=3.8553;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:27:36.11:0,36,823	1/1:17,0:14:31.10:413,31,0	./.	./.	1/1:19,0:18:29.99:360,30,0	1/1:17,0:17:17.71:212,18,0	1/1:28,0:24:11.70:102,12,0	./.	1/1:14,0:14:17.87:229,18,0	0/1:27,0:24:32.50:264,0,32	0/1:19,0:17:53.98:66,0,54	1/1:17,0:14:11.90:141,12,0	1/1:25,0:23:29.16:284,29,0	1/1:21,0:20:24.08:321,24,0	0/1:24,0:22:60.48:200,0,60	1/1:17,11:25:12.04:216,12,0	0/1:35,0:29:99:234,0,153	0/0:18,0:20:15.01:0,15,198	0/1:15,0:10:20.91:37,0,21	1/1:16,0:16:20.80:269,21,0	1/1:10,0:9:17.94:227,18,0	1/1:20,0:20:20.69:235,21,0	1/1:19,0:18:9.02:116,9,0	0/1:25,0:20:9.58:107,0,10	0/1:18,0:18:99:113,0,102	1/1:23,0:24:21:251,21,0	1/1:16,0:16:17.98:219,18,0	1/1:16,0:15:9:86,9,0
chr10	99199360	.	AGAAGAAGAAGAG	A	5271.71	PASS	AB=0.994;AC=32;AF=0.593;AN=54;BaseQRankSum=-1.156;DP=634;FS=1.340;HRun=0;HaplotypeScore=194.8243;InbreedingCoeff=-0.4022;MQ=44.44;MQ0=58;MQRankSum=1.899;QD=8.63;ReadPosRankSum=0.891;VQSLOD=3.6355;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:36:99:129,0,1184	0/1:23,0:20:66.72:67,0,277	./.	0/0:1,0:1:2.80:0,3,13	0/1:25,0:21:70.52:71,0,320	0/1:24,0:21:9.58:266,0,10	0/1:27,0:22:59.08:147,0,59	1/1:26,0:9:17.41:130,17,0	1/1:18,0:14:6.54:194,7,0	0/1:33,0:27:99:232,0,398	0/1:22,0:18:72.85:73,0,245	1/1:21,0:15:18.83:188,19,0	0/1:28,0:23:3.45:319,0,3	0/1:22,1:18:41.03:370,0,41	0/1:25,1:22:99:196,0,382	0/1:21,0:18:0.57:1,0,136	0/1:30,0:21:12.66:13,0,375	0/0:21,0:18:0.86:0,1,303	0/1:19,0:11:95.42:95,0,143	1/1:22,0:21:36.39:534,36,0	0/1:19,0:18:55.64:185,0,56	0/1:23,0:22:30.15:252,0,30	1/1:2,18:20:14.44:333,14,0	0/1:41,1:34:38.79:695,0,39	0/1:22,0:21:31.86:32,0,354	1/1:30,0:29:24.68:465,25,0	0/1:12,0:11:93.16:124,0,93	1/1:11,0:10:11.82:162,12,0
chr10	99199363	.	AGAAGAAGAG	A	9718.17	PASS	AB=0.984;AC=41;AF=0.759;AN=54;BaseQRankSum=-1.092;DP=642;FS=5.690;HRun=0;HaplotypeScore=159.2264;InbreedingCoeff=-0.0707;MQ=44.59;MQ0=58;MQRankSum=2.713;QD=15.73;ReadPosRankSum=1.911;VQSLOD=3.3976;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:46,0:38:99:174,0,835	1/1:23,0:21:18.11:239,18,0	./.	0/0:1,0:1:2.80:0,3,13	1/1:27,0:23:5.70:207,6,0	1/1:23,2:22:31.96:512,32,0	0/1:29,0:23:15.67:417,0,16	1/1:27,0:10:16.49:128,16,0	1/1:17,1:14:11.97:533,12,0	0/1:31,0:25:58.95:325,0,59	0/1:21,1:18:90.31:90,0,98	1/1:20,1:15:20.62:412,21,0	1/1:27,0:22:44.76:734,45,0	1/1:17,5:17:24.49:724,24,0	0/1:25,0:21:99:205,0,122	0/1:20,1:18:90.89:91,0,106	0/1:32,1:24:99:240,0,189	0/0:22,0:18:0.81:0,1,193	1/1:21,0:13:3.60:187,4,0	1/1:23,0:22:53.21:825,53,0	1/1:20,0:19:28.92:504,29,0	1/1:21,3:23:47.90:684,48,0	1/1:20,0:20:14.82:217,15,0	0/1:41,0:34:31.14:543,0,31	0/1:21,0:20:76.45:76,0,115	1/1:5,23:27:68.92:954,69,0	1/1:13,0:12:26.99:467,27,0	1/1:9,0:8:12.03:229,12,0
chr10	99199366	.	AGAAGAG	A	9974.01	PASS	AB=0.995;AC=46;AF=0.852;AN=54;BaseQRankSum=-2.755;DP=635;FS=2.124;HRun=0;HaplotypeScore=136.1316;InbreedingCoeff=0.1167;MQ=44.58;MQ0=56;MQRankSum=2.766;QD=15.76;ReadPosRankSum=-0.132;VQSLOD=4.0666;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:46,0:38:99:177,0,485	1/1:21,2:21:53.86:801,54,0	./.	0/0:1,0:1:2.80:0,3,13	1/1:26,0:23:56.86:825,57,0	1/1:24,0:21:27.76:322,28,0	0/1:30,0:23:15.78:254,0,16	1/1:24,0:10:16.89:129,17,0	1/1:19,0:15:14.74:346,15,0	1/1:27,2:25:60.09:874,60,0	1/1:19,1:17:26.81:288,27,0	1/1:21,0:15:20.65:262,21,0	1/1:28,0:23:41.46:408,41,0	1/1:21,0:16:23.36:424,23,0	1/1:26,0:21:35.92:539,36,0	0/1:21,0:18:97.91:130,0,98	0/1:32,1:24:99:482,0,177	0/1:22,0:18:2.25:2,0,121	1/1:18,1:11:29.94:290,30,0	1/1:22,0:22:50.79:553,51,0	1/1:24,0:23:26.17:396,26,0	1/1:24,0:23:46.59:459,47,0	1/1:21,0:21:14.90:155,15,0	1/1:41,0:34:29.17:502,29,0	0/1:20,0:19:28.74:263,0,29	1/1:28,0:27:68.86:682,69,0	1/1:10,0:9:21.87:259,22,0	1/1:8,0:7:14.95:151,15,0
chr10	99199369	.	AGAG	A	6827.03	PASS	AB=1.000;AC=46;AF=0.852;AN=54;BaseQRankSum=-1.189;DP=633;FS=12.803;HRun=0;HaplotypeScore=125.2109;InbreedingCoeff=0.1717;MQ=44.27;MQ0=54;MQRankSum=2.894;QD=10.84;ReadPosRankSum=-0.501;VQSLOD=3.8573;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:37:99:221,0,169	1/1:22,0:20:30.25:432,30,0	./.	0/0:1,0:1:2.80:0,3,13	1/1:28,0:23:53.16:418,53,0	1/1:26,0:23:32.83:300,33,0	0/1:29,0:23:16.55:203,0,17	1/1:10,11:12:17.76:131,18,0	0/1:19,0:15:1.54:233,0,2	1/1:28,0:24:61.21:582,61,0	1/1:18,0:15:24.87:180,25,0	1/1:21,0:15:17.05:172,17,0	1/1:28,0:22:16.42:186,16,0	1/1:20,0:16:20.82:237,21,0	1/1:23,0:18:41.42:362,41,0	0/1:21,0:18:0.54:1,0,105	0/1:35,0:24:87.53:273,0,88	0/1:21,0:17:14.04:14,0,14	1/1:18,0:10:29.94:252,30,0	1/1:21,0:22:51.77:404,52,0	1/1:26,0:25:20.51:294,21,0	1/1:22,0:22:44.32:345,44,0	1/1:21,0:21:14.29:93,14,0	1/1:43,0:35:48.55:426,49,0	1/1:20,0:19:26.89:279,27,0	1/1:27,0:27:66.36:540,66,0	1/1:11,0:10:20.12:155,20,0	1/1:8,0:7:12.79:94,13,0
chr10	99199417	.	AGAG	A	7191.71	PASS	AB=0.740;AC=29;AF=0.558;AN=52;BaseQRankSum=-1.106;DP=840;FS=14.006;HRun=0;HaplotypeScore=111.2413;InbreedingCoeff=0.0235;MQ=38.56;MQ0=178;MQRankSum=2.099;QD=10.53;ReadPosRankSum=1.551;VQSLOD=3.8796;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:32:3.05:0,3,483	1/1:6,9:12:18.06:265,18,0	./.	./.	1/1:11,20:25:39.09:535,39,0	0/1:11,22:29:9.89:409,0,10	0/1:38,8:20:9.03:125,0,9	0/0:35,0:14:20.75:0,21,281	0/1:18,8:15:0.47:326,0,0	1/1:23,13:23:8.35:720,8,0	0/1:12,9:16:46.24:137,0,46	1/1:21,5:10:15.05:220,15,0	0/1:14,21:27:21.13:285,0,21	0/1:16,5:13:14.16:324,0,14	1/1:31,8:24:36.11:507,36,0	0/0:24,0:19:36.11:0,36,606	0/1:25,6:18:6.62:315,0,7	0/1:29,0:14:11.93:39,0,12	1/1:22,11:14:33.05:408,33,0	0/1:12,22:27:12.59:393,0,13	0/1:44,40:56:5.89:491,0,6	0/1:15,14:21:21.42:326,0,21	1/1:13,7:16:18.06:265,18,0	0/1:38,16:41:99:720,0,120	0/1:14,10:20:83.49:117,0,83	0/0:38,1:29:51.15:0,51,835	1/1:4,12:13:18.06:265,18,0	0/0:12,0:9:18.06:0,18,338
chr10	99199546	.	AAGGAGGAGGAAGAAG	A	18365.29	PASS	AB=0.906;AC=47;AF=0.839;AN=56;BaseQRankSum=2.224;DP=615;FS=35.267;HRun=0;HaplotypeScore=220.9163;InbreedingCoeff=0.5032;MQ=50.25;MQ0=12;MQRankSum=-3.410;QD=36.15;ReadPosRankSum=3.772;VQSLOD=2.9435;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,8:19:30.10:992,30,0	1/1:3,7:10:8.95:376,9,0	0/0:31,0:10:5.91:0,6,161	0/0:52,0:22:22.89:0,23,356	1/1:5,16:21:33.02:993,33,0	1/1:9,13:21:24.08:1001,24,0	1/1:9,0:8:12.04:323,12,0	1/1:25,12:35:36.07:671,36,0	1/1:4,10:13:6.02:251,6,0	1/1:11,16:26:38.99:1366,39,0	1/1:7,9:16:15.05:579,15,0	1/1:9,10:17:15.05:627,15,0	1/1:14,17:26:20.19:876,20,0	1/1:4,5:8:11.84:498,12,0	1/1:15,15:27:24.08:1003,24,0	0/0:23,0:22:48.16:0,48,2913	0/1:15,0:15:24.16:199,0,24	1/1:14,0:13:8.91:376,9,0	1/1:13,8:19:24.08:802,24,0	1/1:9,14:22:33:1065,33,0	0/1:17,0:14:99:159,0,203	1/1:7,16:22:33.02:1168,33,0	1/1:5,6:11:12.04:502,12,0	0/1:16,11:26:99:236,0,177	1/1:4,22:25:36.12:1505,36,0	1/1:9,15:24:42.10:1165,42,0	1/1:7,19:25:21.15:878,21,0	1/1:3,9:12:18.06:753,18,0
chr10	99200051	.	G	GCACCTTCCA	948.15	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.050;DP=684;FS=3.377;HRun=0;HaplotypeScore=180.6399;InbreedingCoeff=0.9929;MQ=87.16;MQ0=0;MQRankSum=-4.479;QD=72.93;ReadPosRankSum=1.160;VQSLOD=3.8512;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,166,5016	0/0:10,0:10:27.09:0,27,828	0/0:25,0:25:75.24:0,75,2108	0/0:26,0:25:74.94:0,75,1928	0/0:20,0:20:54.66:0,55,1598	0/0:19,0:19:54.19:0,54,1685	0/0:29,0:29:84.29:0,84,2508	0/0:30,0:30:87.27:0,87,2379	0/0:21,0:21:61.76:0,62,1875	0/0:22,0:22:60.20:0,60,1787	0/0:22,0:22:65.25:0,65,1793	0/0:23,0:23:69.22:0,69,1989	0/0:22,0:22:60.21:0,60,1896	0/0:13,0:13:39.12:0,39,1162	0/0:25,0:25:69.22:0,69,2101	0/0:22,0:22:66.17:0,66,1941	0/0:34,0:34:99:0,99,2916	1/1:2,6:13:21.07:1040,21,0	0/0:21,0:21:60.19:0,60,1800	0/0:23,0:23:66.23:0,66,2021	0/0:52,0:51:99:0,148,4459	0/0:21,0:21:60.21:0,60,1892	0/0:17,0:17:48.16:0,48,1477	0/0:22,0:22:66.23:0,66,1996	0/0:28,0:28:84.24:0,84,2437	0/0:31,0:31:93.30:0,93,2527	0/0:27,0:26:81.26:0,81,2479	0/0:8,0:8:24.08:0,24,758
chr10	99200626	.	GAA	G	13708.02	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-2.223;DP=557;FS=8.171;HRun=9;HaplotypeScore=76.9939;InbreedingCoeff=0.9941;MQ=72.42;MQ0=3;MQRankSum=-3.865;QD=28.56;ReadPosRankSum=1.926;VQSLOD=4.6203;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:29.55:0,30,474	1/1:1,10:11:30.09:350,30,0	0/0:24,0:21:45:0,45,621	0/0:15,0:14:20.36:0,20,268	1/1:1,24:25:69.20:804,69,0	1/1:5,22:27:57.16:664,57,0	1/1:1,12:13:27.08:315,27,0	1/1:5,29:34:87.18:976,87,0	1/1:1,18:19:54.16:629,54,0	1/1:6,18:24:51.13:594,51,0	1/1:3,20:23:57.12:650,57,0	1/1:1,21:21:51.14:594,51,0	1/1:3,14:17:42.12:489,42,0	1/1:0,10:10:30.09:350,30,0	1/1:2,15:17:36.11:420,36,0	0/0:17,1:19:19.22:0,19,782	1/1:2,19:21:48.14:559,48,0	1/1:0,11:11:33.10:385,33,0	1/1:3,16:19:48.11:538,48,0	1/1:4,19:22:48.11:557,48,0	1/1:2,9:11:27.07:315,27,0	1/1:2,19:21:57.17:664,57,0	1/1:1,23:24:60.17:698,60,0	1/1:1,8:9:21.06:245,21,0	1/1:0,20:20:51.15:594,51,0	1/1:4,26:29:75.17:849,75,0	1/1:1,37:38:99:1189,102,0	1/1:0,11:11:24.07:280,24,0
chr10	99201461	.	T	TG	25710.38	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.044;DP=781;FS=2.408;HRun=3;HaplotypeScore=115.4158;InbreedingCoeff=0.9975;MQ=79.39;MQ0=0;MQRankSum=-7.384;QD=36.11;ReadPosRankSum=3.879;VQSLOD=4.4160;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,47:50:99:1848,132,0	1/1:1,7:8:21.07:294,21,0	0/0:16,0:16:30.06:0,30,345	0/0:22,0:22:39.30:0,39,645	1/1:0,29:29:84.28:1176,84,0	1/1:2,21:23:54.18:756,54,0	1/1:1,29:30:87.29:1219,87,0	1/1:3,26:29:75.20:994,75,0	1/1:2,26:28:75.25:1050,75,0	1/1:2,20:22:60.20:839,60,0	1/1:2,11:13:27.03:376,27,0	1/1:2,44:46:99:1680,120,0	1/1:3,33:37:96.32:1336,96,0	1/1:0,36:36:99:1386,99,0	1/1:2,31:33:63.21:882,63,0	0/0:31,0:31:87.25:0,87,1032	1/1:1,33:34:96.32:1344,96,0	1/1:3,33:36:84.28:1176,84,0	1/1:2,28:30:87.22:1160,87,0	1/1:0,15:15:42.14:588,42,0	1/1:5,49:54:99:1765,126,0	1/1:0,27:27:72.24:1007,72,0	1/1:0,15:15:32.79:461,33,0	1/1:2,36:38:96.32:1343,96,0	1/1:0,19:19:54.18:756,54,0	1/1:0,23:23:69.14:889,69,0	1/1:0,27:28:72.24:1005,72,0	1/1:0,9:9:27.09:378,27,0
chr10	99202056	.	C	CT	1168.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.850;DP=659;FS=9.903;HRun=5;HaplotypeScore=61.1652;InbreedingCoeff=0.9938;MQ=80.82;MQ0=0;MQRankSum=-4.661;QD=29.20;ReadPosRankSum=0.468;VQSLOD=3.5415;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,39:40:96.31:1263,96,0	0/0:8,0:8:21.05:0,21,226	0/0:15,0:15:40.34:0,40,420	0/0:23,0:23:42.07:0,42,434	0/0:21,0:21:54.11:0,54,571	0/0:32,0:31:93.22:0,93,991	0/0:23,0:23:60.15:0,60,645	0/0:32,0:31:93.22:0,93,993	0/0:21,0:21:63.16:0,63,677	0/0:23,0:23:63.15:0,63,669	0/0:22,0:22:57.14:0,57,612	0/0:31,0:31:87.21:0,87,929	0/0:17,0:17:51.11:0,51,539	0/0:22,0:22:63.14:0,63,667	0/0:32,0:32:87.20:0,87,926	0/0:18,0:18:54.14:0,54,580	0/0:33,0:33:93.19:0,93,982	0/0:19,0:19:54.11:0,54,569	0/0:16,0:16:39.06:0,39,401	0/0:23,0:23:69.16:0,69,733	0/0:36,0:36:99:0,105,1128	0/0:19,0:19:51.13:0,51,548	0/0:18,0:18:45.11:0,45,483	0/0:28,0:28:78.13:0,78,816	0/0:27,0:26:75.19:0,75,806	0/0:28,0:28:75.18:0,75,799	0/0:24,0:24:66.17:0,66,709	0/0:8,0:8:24.06:0,24,258
chr10	99202633	.	C	CCACA	1820.10	PASS	AB=0.780;AC=38;AF=0.731;AN=52;BaseQRankSum=0.287;DP=576;FS=2.558;HRun=0;HaplotypeScore=105.9748;InbreedingCoeff=0.1105;MQ=54.84;MQ0=34;MQRankSum=-1.370;QD=4.19;ReadPosRankSum=1.122;VQSLOD=2.0456;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:16:0.21:18,0,0	1/1:7,0:7:3.01:37,3,0	./.	./.	1/1:15,0:17:3:28,3,0	1/1:16,1:25:5.75:82,6,0	1/1:12,0:15:3.01:45,3,0	1/1:31,0:26:7.73:43,8,0	1/1:7,6:15:6.02:140,6,0	1/1:17,0:17:14.98:180,15,0	0/0:10,3:16:0:0,0,0	1/1:13,0:19:5.51:79,6,0	0/1:15,3:19:33.26:108,0,33	0/1:13,4:18:5.95:164,0,6	1/1:19,0:19:5.73:38,6,0	0/0:14,0:14:12.02:0,12,156	1/1:11,5:17:3.01:70,3,0	1/1:18,0:23:24.74:317,25,0	1/1:16,0:13:5.93:44,6,0	0/0:13,0:13:3.01:0,3,39	0/1:38,0:36:30.23:74,0,30	1/1:11,0:15:5.99:49,6,0	0/0:14,0:21:4.61:0,5,50	0/1:27,6:33:60.92:61,0,83	1/1:15,5:20:6.02:125,6,0	1/1:13,0:12:12.52:86,13,0	0/1:10,4:21:26.34:112,0,26	1/1:5,0:6:8.42:59,8,0
chr10	99202931	.	C	CTT	4978.47	PASS	AB=0.910;AC=38;AF=0.679;AN=56;BaseQRankSum=8.365;DP=610;FS=13.619;HRun=1;HaplotypeScore=163.5207;InbreedingCoeff=0.1185;MQ=44.55;MQ0=23;MQRankSum=-2.213;QD=9.54;ReadPosRankSum=4.420;VQSLOD=0.2841;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:23.72:0,24,171	1/1:9,0:9:15.11:153,15,0	0/0:25,0:12:32.97:0,33,308	0/0:23,0:4:11.77:0,12,121	1/1:20,0:20:0.54:153,1,0	0/1:33,0:33:79.91:280,0,80	0/1:24,0:24:32.96:222,0,33	0/1:35,0:33:99:244,0,178	0/1:8,19:26:51.37:99,0,51	0/1:28,0:27:23.80:389,0,24	1/1:15,2:17:10.29:173,10,0	1/1:19,0:18:1.52:199,2,0	0/1:6,19:26:38.57:39,0,69	1/1:26,1:27:27.89:373,28,0	1/1:25,0:24:27.17:384,27,0	0/1:12,0:12:2.83:3,0,140	0/1:22,0:22:53.44:104,0,53	0/0:23,0:22:31.69:0,32,238	0/1:16,0:14:73.04:106,0,73	1/1:4,13:17:5.90:38,6,0	1/1:17,0:14:18.30:126,18,0	0/1:18,1:19:23.14:92,0,23	1/1:22,0:20:24.41:171,24,0	1/1:21,0:20:37.65:339,38,0	1/1:22,0:21:29.85:365,30,0	1/1:23,0:22:6.88:335,7,0	1/1:30,0:29:6.62:399,7,0	1/1:11,0:9:23.92:193,24,0
chr10	99202961	.	CTCTCTT	C	3680.27	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-7.019;DP=540;FS=12.603;HRun=0;HaplotypeScore=167.3785;InbreedingCoeff=-0.4076;MQ=51.54;MQ0=10;MQRankSum=4.707;QD=7.06;ReadPosRankSum=-2.443;VQSLOD=1.2175;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:18.91:0,19,427	1/1:3,0:3:2.94:25,3,0	0/1:14,0:11:39.33:39,0,105	0/1:20,0:11:32.97:33,0,159	0/1:19,0:19:53.56:102,0,54	0/1:30,0:30:66.76:164,0,67	1/1:25,0:25:17.03:279,17,0	1/1:23,0:20:47.73:376,48,0	0/1:28,0:27:87.43:196,0,87	0/1:35,0:35:99:307,0,434	1/1:12,0:12:11.84:104,12,0	0/1:17,0:16:35.86:163,0,36	0/1:23,0:23:88.28:107,0,88	0/1:20,0:20:33.16:132,0,33	1/1:27,0:26:3.29:240,3,0	0/1:14,0:14:10.84:11,0,216	0/1:25,0:25:74.06:207,0,74	1/1:2,17:18:6.02:107,6,0	0/1:12,0:12:23.48:109,0,23	1/1:11,0:11:5.94:43,6,0	0/1:17,0:16:49.46:52,0,49	0/1:18,0:18:52.41:60,0,52	1/1:19,0:18:8.02:72,8,0	1/1:26,0:25:14.97:217,15,0	1/1:19,0:18:19.72:214,20,0	0/1:17,0:16:99:128,0,219	0/1:21,0:21:99:117,0,279	0/1:7,0:6:34.42:75,0,34
chr10	99204972	.	TA	T	18858.76	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=3.039;DP=598;FS=4.090;HRun=3;HaplotypeScore=61.4196;InbreedingCoeff=0.9974;MQ=79.70;MQ0=0;MQRankSum=-9.473;QD=35.12;ReadPosRankSum=5.644;VQSLOD=5.1634;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:81.26:1052,81,0	1/1:0,7:7:21.07:273,21,0	0/0:30,0:30:81.21:0,81,1155	0/0:15,0:15:45.15:0,45,643	1/1:0,25:25:66.21:857,66,0	1/1:0,18:18:48.16:623,48,0	1/1:1,23:24:54.18:701,54,0	1/1:1,37:38:99:1436,111,0	1/1:2,10:12:24.08:312,24,0	1/1:1,24:25:72.22:921,72,0	1/1:0,30:30:84.27:1077,84,0	1/1:1,16:17:48.16:623,48,0	1/1:0,19:19:51.17:662,51,0	1/1:0,23:23:69.22:896,69,0	1/1:0,20:20:57.19:740,57,0	0/0:16,0:16:48.16:0,48,719	1/1:1,26:27:66.21:854,66,0	1/1:1,10:11:30.10:389,30,0	1/1:0,20:20:60.18:764,60,0	1/1:1,18:19:51.17:662,51,0	1/1:1,15:16:42.14:545,42,0	1/1:0,27:27:78.25:999,78,0	1/1:0,21:21:54.17:700,54,0	1/1:0,15:15:42.14:545,42,0	1/1:1,27:28:75.24:973,75,0	1/1:1,24:25:72.23:935,72,0	1/1:0,27:27:72.23:930,72,0	1/1:0,10:10:30.10:389,30,0
chr10	99205359	.	G	GCAAACACACAGA	32758.35	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-1.006;DP=919;FS=5.211;HRun=0;HaplotypeScore=232.3510;InbreedingCoeff=0.8884;MQ=53.57;MQ0=0;MQRankSum=-7.001;QD=39.28;ReadPosRankSum=-0.559;VQSLOD=4.1843;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,29:55:54.11:1280,54,0	1/1:1,9:11:12.04:655,12,0	0/0:19,0:11:14.98:0,15,281	0/0:35,0:21:12.10:0,12,353	1/1:4,24:34:23.16:227,23,0	1/1:4,17:28:33.11:1200,33,0	1/1:10,25:48:30.57:866,31,0	1/1:51,0:51:99:4009,120,0	1/1:2,27:35:48.16:2012,48,0	1/1:6,18:35:75.03:2623,75,0	1/1:3,26:32:59.07:786,59,0	1/1:5,24:39:45.15:2236,45,0	1/1:3,21:33:30.10:1732,30,0	1/1:6,21:35:43.03:1716,43,0	1/1:3,22:35:27.09:609,27,0	0/0:31,0:31:78.23:0,78,2290	1/1:5,11:21:16.30:757,16,0	1/1:6,11:18:10.28:460,10,0	1/1:3,14:25:60.17:2067,60,0	1/1:4,22:39:56.98:1086,57,0	1/1:22,30:63:48.15:797,48,0	1/1:5,23:34:51.08:886,51,0	1/1:6,15:32:23.96:719,24,0	1/1:3,17:25:6.96:72,7,0	1/1:4,18:33:33.11:904,33,0	1/1:6,18:31:63.10:2918,63,0	1/1:5,24:37:39.13:1880,39,0	1/1:1,3:4:6.02:262,6,0
chr10	99206073	.	C	CT	24884.10	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-8.643;DP=699;FS=1.167;HRun=1;HaplotypeScore=66.6851;InbreedingCoeff=0.9969;MQ=79.44;MQ0=0;MQRankSum=-6.306;QD=38.46;ReadPosRankSum=3.385;VQSLOD=5.5240;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:44:99:1707,114,0	1/1:2,6:8:18.06:270,18,0	0/0:17,0:17:44.93:0,45,501	0/0:14,0:14:35.97:0,36,418	1/1:1,16:17:48.12:694,48,0	1/1:1,18:19:43.16:671,43,0	1/1:0,27:27:69.23:1034,69,0	1/1:2,26:28:75.22:1067,75,0	1/1:2,28:30:72.24:1073,72,0	1/1:2,33:35:99:1464,99,0	1/1:1,25:26:63.21:944,63,0	1/1:0,25:25:69.23:1034,69,0	1/1:0,25:25:69.23:1034,69,0	1/1:0,21:21:60.20:899,60,0	1/1:1,34:35:93.32:1393,93,0	0/0:21,0:21:63.19:0,63,803	1/1:1,29:30:78.26:1168,78,0	1/1:1,17:18:33.11:494,33,0	1/1:1,24:25:72.24:1075,72,0	1/1:1,32:33:87.15:1226,87,0	1/1:0,23:23:51.17:764,51,0	1/1:2,25:27:69.23:1030,69,0	1/1:0,26:26:66.22:988,66,0	1/1:0,16:16:39.13:584,39,0	1/1:0,21:21:57.19:854,57,0	1/1:0,30:30:90.25:1270,90,0	1/1:3,37:41:99:1564,105,0	1/1:0,17:17:39.13:584,39,0
chr10	99206185	.	GA	G	19699.25	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.484;DP=691;FS=3.945;HRun=4;HaplotypeScore=109.5555;InbreedingCoeff=0.9998;MQ=85.38;MQ0=0;MQRankSum=-8.360;QD=31.72;ReadPosRankSum=6.022;VQSLOD=4.2272;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,45:45:99:1475,123,0	1/1:0,13:13:36.11:432,36,0	0/0:25,0:25:46.98:0,47,702	0/0:27,1:27:42.39:0,42,729	1/1:3,29:32:78.19:916,78,0	1/1:0,21:21:60.18:720,60,0	1/1:0,15:15:33.10:396,33,0	1/1:4,24:28:66.19:781,66,0	1/1:1,23:24:69.21:828,69,0	1/1:1,24:25:75.17:866,75,0	1/1:0,27:27:72.22:862,72,0	1/1:1,25:26:75.23:900,75,0	1/1:0,23:23:66.20:792,66,0	1/1:0,17:17:42.13:502,42,0	1/1:3,35:38:96.29:1152,96,0	0/0:17,0:17:51.17:0,51,707	1/1:1,21:22:60.18:720,60,0	1/1:1,13:14:39.12:468,39,0	1/1:1,14:15:42.12:494,42,0	1/1:5,33:38:93.28:1116,93,0	1/1:0,26:26:75.23:900,75,0	1/1:3,21:24:69.20:817,69,0	1/1:2,26:28:54.11:648,54,0	1/1:1,20:21:57.17:680,57,0	1/1:1,22:23:60.18:720,60,0	1/1:1,33:34:99:1186,99,0	1/1:1,19:20:48.03:576,48,0	1/1:0,22:22:63.19:755,63,0
chr10	99206457	.	G	GC	17986.76	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=12.172;DP=695;FS=2.241;HRun=0;HaplotypeScore=217.4022;InbreedingCoeff=0.9929;MQ=82.61;MQ0=0;MQRankSum=-8.820;QD=28.69;ReadPosRankSum=6.040;VQSLOD=4.2985;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,21:29:66:744,66,0	1/1:2,6:8:14.72:202,15,0	0/0:22,0:22:66.12:0,66,856	0/0:27,0:27:72.45:0,72,928	1/1:3,30:33:51.09:668,51,0	1/1:1,17:18:47.59:636,48,0	1/1:7,21:28:32.39:672,32,0	1/1:8,20:28:57.15:782,57,0	1/1:1,34:35:99:1361,99,0	1/1:9,19:28:33.68:686,34,0	1/1:0,18:18:30.09:392,30,0	1/1:1,31:32:89.38:1214,89,0	1/1:0,15:15:27.09:373,27,0	1/1:1,16:17:42.07:558,42,0	1/1:5,26:31:67.87:965,68,0	0/0:19,0:19:57.18:0,57,780	1/1:0,22:22:60.20:820,60,0	1/1:2,14:16:40.07:543,40,0	1/1:3,15:18:43.01:572,43,0	1/1:9,11:20:29.10:361,29,0	1/1:4,37:41:81.03:1103,81,0	1/1:6,18:24:34.90:492,35,0	1/1:13,25:37:53.58:696,54,0	1/1:1,36:37:93.24:1254,93,0	1/1:1,29:30:72.06:886,72,0	1/1:2,17:19:53.47:668,53,0	1/1:7,19:26:55.67:766,56,0	1/1:0,16:16:42.14:572,42,0
chr10	99207083	.	AATTT	A	8712.57	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=10.388;DP=357;FS=85.398;HRun=0;HaplotypeScore=117.3335;InbreedingCoeff=0.8124;MQ=86.56;MQ0=0;MQRankSum=-10.374;QD=28.85;ReadPosRankSum=4.907;VQSLOD=1.1771;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:15.05:189,15,0	1/1:0,3:3:6.02:78,6,0	0/0:21,0:21:63.22:0,63,1632	0/0:16,0:16:33.16:0,33,1017	1/1:0,12:12:18.05:241,18,0	1/1:1,15:16:45.12:591,45,0	1/1:1,9:10:21.07:270,21,0	1/1:5,16:21:20.50:308,21,0	1/1:1,15:16:42.12:528,42,0	1/1:0,15:15:36.12:549,36,0	1/1:0,8:8:9.03:108,9,0	1/1:3,20:23:51:724,51,0	1/1:2,12:14:33.11:421,33,0	1/1:2,15:17:42.12:528,42,0	1/1:2,17:19:54.16:724,54,0	0/0:18,0:18:54.19:0,54,1554	1/1:3,8:11:27.03:356,27,0	1/1:0,2:2:6.02:85,6,0	1/1:1,12:13:36.11:530,36,0	1/1:0,15:15:33.11:477,33,0	1/1:1,8:9:27.07:345,27,0	1/1:1,10:11:12.04:147,12,0	1/1:1,15:16:36.12:486,36,0	1/1:1,9:10:15.04:182,15,0	1/1:1,9:10:9.03:156,9,0	1/1:1,14:15:33.11:486,33,0	1/1:0,6:6:12.04:149,12,0	1/1:0,1:1:3.01:55,3,0
chr10	99207088	.	TG	T	5215.10	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=10.806;DP=362;FS=76.184;HRun=1;HaplotypeScore=113.8770;InbreedingCoeff=0.8118;MQ=85.10;MQ0=0;MQRankSum=-10.434;QD=17.10;ReadPosRankSum=4.499;VQSLOD=1.4739;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:11.95:93,12,0	1/1:3,0:3:5.98:47,6,0	0/0:20,0:20:57.25:0,57,788	0/0:16,0:16:33.69:0,34,410	1/1:12,0:12:17.80:134,18,0	1/1:15,1:16:44.73:354,45,0	1/1:9,3:12:20.93:164,21,0	1/1:20,0:20:32.91:264,33,0	1/1:15,1:16:41.86:335,42,0	1/1:18,0:18:43.34:337,43,0	1/1:8,0:8:8.96:68,9,0	1/1:20,3:23:50.77:402,51,0	1/1:15,0:15:38.82:297,39,0	1/1:15,0:15:38.84:303,39,0	1/1:19,0:19:53.40:410,53,0	0/0:21,0:21:63.18:0,63,897	1/1:8,1:9:23.97:206,24,0	1/1:3,0:3:5.99:50,6,0	1/1:12,0:12:32.97:279,33,0	1/1:16,0:16:35.87:288,36,0	1/1:8,0:8:23.81:183,24,0	1/1:10,0:10:11.94:90,12,0	1/1:16,0:16:35.86:283,36,0	1/1:9,1:10:14.92:112,15,0	1/1:10,0:10:8.99:79,9,0	1/1:17,0:17:37.76:300,38,0	1/1:7,0:7:14.91:111,15,0	1/1:1,0:1:3:28,3,0
chr10	99207090	.	T	TTA	8692.52	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=10.320;DP=392;FS=74.458;HRun=0;HaplotypeScore=115.1290;InbreedingCoeff=0.8411;MQ=82.33;MQ0=0;MQRankSum=-10.544;QD=25.79;ReadPosRankSum=4.002;VQSLOD=2.4852;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,9:12:15.04:167,15,0	1/1:1,3:4:6.02:67,6,0	0/0:21,0:21:58.02:0,58,840	0/0:14,0:14:36.99:0,37,500	1/1:1,12:13:18.01:211,18,0	1/1:1,15:16:45.12:554,45,0	1/1:5,9:14:24.05:260,24,0	1/1:7,16:23:33.11:457,33,0	1/1:1,15:16:42.12:496,42,0	1/1:1,19:21:54.14:721,54,0	1/1:2,8:10:9.02:92,9,0	1/1:3,20:23:51.15:646,51,0	1/1:4,12:16:39.11:451,39,0	1/1:0,15:15:39.11:438,39,0	1/1:6,17:23:57.16:700,57,0	0/0:20,0:20:60.20:0,60,900	1/1:4,8:12:27.08:367,27,0	1/1:1,2:3:6.02:75,6,0	1/1:0,12:12:33.11:448,33,0	1/1:2,14:16:36.11:458,36,0	1/1:1,8:9:27.07:312,27,0	1/1:2,10:12:15.04:161,15,0	1/1:2,15:17:39.09:450,39,0	1/1:2,9:11:15.03:156,15,0	1/1:2,9:11:9.03:141,9,0	1/1:5,14:19:45.15:611,45,0	1/1:1,6:7:15.04:166,15,0	1/1:1,1:2:6.02:88,6,0
chr10	99208206	.	CG	C	17420.91	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=9.213;DP=594;FS=0.529;HRun=1;HaplotypeScore=174.7811;InbreedingCoeff=0.9968;MQ=82.33;MQ0=0;MQRankSum=-9.710;QD=32.81;ReadPosRankSum=5.174;VQSLOD=4.3698;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:39.12:466,39,0	1/1:0,6:6:18.05:217,18,0	0/0:19,1:20:35.41:0,35,753	0/0:26,0:25:33.90:0,34,778	1/1:2,30:32:74.10:894,74,0	1/1:0,28:28:81.25:973,81,0	1/1:0,21:21:51.15:603,51,0	1/1:0,18:18:42.10:479,42,0	1/1:0,25:25:72.21:852,72,0	1/1:0,35:35:99:1187,102,0	1/1:0,18:18:51.15:606,51,0	1/1:2,18:20:57.14:653,57,0	1/1:1,20:21:63.15:728,63,0	1/1:0,26:26:78.23:915,78,0	1/1:0,20:20:57.17:663,57,0	0/0:17,0:17:51.16:0,51,791	1/1:0,16:16:42.12:495,42,0	1/1:0,11:11:33.10:398,33,0	1/1:0,18:18:54.14:626,54,0	1/1:0,33:33:85.61:1045,86,0	1/1:0,22:22:60.18:704,60,0	1/1:0,20:20:57.17:684,57,0	1/1:0,29:29:84.25:994,84,0	1/1:0,13:13:36.11:428,36,0	1/1:3,20:23:57.82:680,58,0	1/1:0,20:20:60.18:719,60,0	1/1:2,27:29:78.23:935,78,0	1/1:0,13:13:39.12:477,39,0
chr10	99208779	.	TCTA	T	21409.21	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=9.069;DP=735;FS=3.717;HRun=0;HaplotypeScore=193.9010;InbreedingCoeff=0.9917;MQ=89.25;MQ0=0;MQRankSum=-10.959;QD=36.60;ReadPosRankSum=3.883;VQSLOD=5.0974;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,111,2479	1/1:0,13:13:36.12:588,36,0	0/0:34,0:34:93.32:0,93,1983	0/0:34,0:34:81.25:0,81,1740	1/1:2,15:17:21.07:343,21,0	1/1:2,16:18:48.16:784,48,0	1/1:2,28:30:72.25:1175,72,0	1/1:3,33:36:81.25:1266,81,0	1/1:1,37:38:90.31:1470,90,0	1/1:2,16:18:45.12:673,45,0	1/1:1,23:24:54.18:882,54,0	1/1:2,33:35:87.30:1419,87,0	1/1:1,23:24:60.20:979,60,0	1/1:1,22:23:66.23:1078,66,0	1/1:3,29:32:72.25:1176,72,0	0/0:28,0:28:72.25:0,72,1609	1/1:2,30:32:84.29:1372,84,0	0/0:11,0:11:33.11:0,33,730	1/1:4,21:25:60.14:887,60,0	1/1:5,24:29:57.15:902,57,0	1/1:3,49:52:99:1617,99,0	1/1:2,18:20:30.10:489,30,0	1/1:1,22:23:48.16:783,48,0	1/1:3,30:33:72.25:1176,72,0	1/1:0,16:16:36.12:588,36,0	1/1:2,13:15:36.12:588,36,0	1/1:1,26:27:60.04:979,60,0	1/1:0,5:5:12.04:196,12,0
chr10	99208997	.	G	GT	10984.42	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=12.852;DP=553;FS=7.769;HRun=2;HaplotypeScore=147.7738;InbreedingCoeff=0.9780;MQ=86.97;MQ0=0;MQRankSum=-10.220;QD=24.14;ReadPosRankSum=4.231;VQSLOD=4.2839;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:69.51:671,70,0	1/1:1,5:6:15.02:144,15,0	0/0:25,0:25:72.21:0,72,897	0/0:30,0:30:77.35:0,77,986	1/1:3,9:12:20.99:216,21,0	1/1:2,20:22:60.11:619,60,0	1/1:4,13:17:42.16:387,42,0	1/1:15,15:30:49.45:458,49,0	1/1:7,14:21:52.68:537,53,0	1/1:4,14:18:51.03:488,51,0	1/1:3,17:22:53.87:525,54,0	1/1:7,13:20:46.95:468,47,0	1/1:7,21:29:72.92:711,73,0	1/1:1,16:17:50.11:491,50,0	1/1:5,19:25:71.58:711,72,0	0/0:31,0:31:93.26:0,93,1163	1/1:12,24:37:83.97:886,84,0	0/0:12,0:12:36.08:0,36,448	1/1:3,13:16:41.77:438,42,0	1/1:0,15:16:47.94:448,48,0	1/1:7,14:21:53.95:528,54,0	1/1:7,9:17:35.40:327,35,0	1/1:5,8:13:32.79:287,33,0	1/1:1,12:13:30.71:331,31,0	1/1:4,9:14:32.85:288,33,0	1/1:2,10:12:33.02:341,33,0	1/1:5,19:24:59.85:591,60,0	1/1:2,3:5:9.02:92,9,0
chr10	99208999	.	A	AAGG	22006.57	PASS	AB=0.545;AC=47;AF=0.839;AN=56;BaseQRankSum=10.760;DP=590;FS=11.908;HRun=0;HaplotypeScore=150.1799;InbreedingCoeff=0.8991;MQ=85.20;MQ0=0;MQRankSum=-11.935;QD=45.00;ReadPosRankSum=4.191;VQSLOD=6.4741;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:30:80.82:1446,81,0	0/1:1,5:6:2.17:206,0,2	0/0:27,0:27:72.23:0,72,1213	0/0:29,0:29:81.25:0,81,1360	1/1:5,8:14:33.69:486,34,0	1/1:3,20:23:66.21:1230,66,0	1/1:5,13:18:53.64:879,54,0	1/1:21,15:36:50.58:1319,51,0	1/1:7,14:21:21.40:945,21,0	1/1:4,14:18:20.83:868,21,0	1/1:7,16:23:56.77:1052,57,0	1/1:9,13:22:51.91:985,52,0	1/1:11,19:31:62.76:1381,63,0	1/1:3,16:19:39.37:1008,39,0	1/1:8,19:27:80.32:1352,80,0	0/0:32,0:32:96.25:0,96,1530	1/1:10,25:35:74.75:1597,75,0	0/0:13,0:13:33.10:0,33,553	1/1:5,13:18:45.15:863,45,0	1/1:2,15:17:47.83:821,48,0	1/1:9,14:23:56.86:1049,57,0	1/1:11,9:20:46.44:774,46,0	1/1:6,8:14:13.50:447,14,0	1/1:3,12:15:34.40:625,34,0	1/1:4,9:13:29.43:443,29,0	1/1:3,10:13:39.13:745,39,0	1/1:10,18:29:26.72:1245,27,0	1/1:1,3:4:12.04:241,12,0
chr10	99209239	.	T	TCCCCC	14274.47	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-5.486;DP=372;FS=0.542;HRun=6;HaplotypeScore=80.5179;InbreedingCoeff=0.9078;MQ=99.75;MQ0=0;MQRankSum=-11.022;QD=49.05;ReadPosRankSum=2.485;VQSLOD=2.2775;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:20:39.13:683,39,0	1/1:3,3:7:9.03:264,9,0	0/0:31,0:28:75.01:0,75,1199	0/0:25,0:22:57.09:0,57,843	1/1:8,4:14:33.09:697,33,0	1/1:8,5:15:17.91:447,18,0	1/1:4,12:16:33.58:984,34,0	1/1:6,6:13:24.03:537,24,0	1/1:3,4:7:9.03:269,9,0	1/1:9,8:19:36.12:866,36,0	1/1:4,8:13:24.08:698,24,0	1/1:1,5:7:18.06:500,18,0	1/1:2,1:3:9:200,9,0	1/1:2,4:7:18.06:500,18,0	1/1:1,8:9:21.07:627,21,0	0/0:20,0:20:57.18:0,57,1024	1/1:3,5:12:24.08:571,24,0	0/0:5,0:5:15.05:0,15,273	1/1:3,2:10:21.07:470,21,0	1/1:8,11:20:42.14:1111,42,0	1/1:1,2:4:9.03:186,9,0	1/1:10,2:12:15.05:372,15,0	1/1:10,12:22:30.10:867,30,0	1/1:3,4:7:18.06:445,18,0	1/1:11,12:23:48.14:1307,48,0	1/1:5,10:17:33.11:844,33,0	1/1:4,5:9:18.05:473,18,0	1/1:0,4:4:12.04:358,12,0
chr10	99209316	.	AACAC	A	5828.81	PASS	AB=0.747;AC=40;AF=0.769;AN=52;BaseQRankSum=0.915;DP=423;FS=8.526;HRun=0;HaplotypeScore=86.5733;InbreedingCoeff=0.6778;MQ=55.41;MQ0=5;MQRankSum=1.226;QD=19.43;ReadPosRankSum=2.873;VQSLOD=3.6246;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,1:17:26.62:27,0,59	1/1:2,3:5:9.02:121,9,0	./.	./.	1/1:12,5:19:24.90:298,25,0	1/1:11,7:18:28.22:365,28,0	1/1:19,2:21:13.78:203,14,0	0/0:23,0:22:3:0,3,28	1/1:5,4:9:12.04:188,12,0	1/1:10,4:15:21.06:306,21,0	1/1:4,6:10:18.95:276,19,0	0/1:7,5:13:5.18:298,0,5	1/1:8,8:16:18.10:430,18,0	1/1:11,6:17:24.55:357,25,0	1/1:9,6:15:10.93:311,11,0	0/0:22,0:24:32.58:0,33,595	1/1:6,5:11:15.01:208,15,0	0/0:11,0:13:29.57:0,30,545	1/1:6,1:7:6.02:86,6,0	1/1:9,4:13:18.05:243,18,0	1/1:11,2:12:3.11:177,3,0	1/1:9,5:15:26.96:333,27,0	1/1:9,4:13:17.96:225,18,0	1/1:9,8:18:24:352,24,0	1/1:9,7:17:39.56:565,40,0	0/0:12,0:13:23.52:0,24,316	1/1:8,7:16:33.09:461,33,0	0/0:10,0:11:23.80:0,24,409
chr10	99209415	.	TACACAC	T	14117.53	PASS	AB=0.606;AC=47;AF=0.839;AN=56;BaseQRankSum=9.180;DP=485;FS=3.182;HRun=0;HaplotypeScore=178.4689;InbreedingCoeff=0.8266;MQ=55.36;MQ0=1;MQRankSum=-10.236;QD=36.96;ReadPosRankSum=1.782;VQSLOD=4.6295;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:20:24.87:25,0,78	1/1:0,5:5:15.01:280,15,0	0/0:27,0:22:15.91:0,16,913	0/0:28,0:22:44.42:0,44,1172	1/1:2,16:18:30.06:472,30,0	1/1:6,11:17:36.12:699,36,0	1/1:6,9:15:27.09:529,27,0	1/1:13,11:24:33.11:716,33,0	1/1:2,15:17:42.14:867,42,0	1/1:1,7:8:21.07:456,21,0	1/1:2,12:14:30.10:577,30,0	1/1:8,14:22:45.15:962,45,0	1/1:4,13:16:39.13:839,39,0	1/1:7,17:23:51.13:1055,51,0	1/1:2,20:22:60.08:1160,60,0	0/0:32,0:34:87.28:0,87,2688	1/1:5,5:10:9.03:195,9,0	0/0:12,0:13:30.07:0,30,869	1/1:7,13:19:39.13:847,39,0	1/1:2,11:13:33.11:649,33,0	1/1:11,4:15:14.73:254,15,0	1/1:4,12:16:33.11:663,33,0	1/1:4,6:10:21.06:382,21,0	1/1:14,8:22:18.94:245,19,0	1/1:6,12:18:39.11:737,39,0	1/1:7,9:16:27.07:544,27,0	1/1:1,13:14:36.12:769,36,0	1/1:2,3:5:9.03:195,9,0
chr10	99209464	.	TTCTC	T	16799.96	PASS	AB=0.575;AC=47;AF=0.839;AN=56;BaseQRankSum=6.359;DP=610;FS=16.613;HRun=0;HaplotypeScore=202.3871;InbreedingCoeff=0.8534;MQ=73.47;MQ0=2;MQRankSum=-10.426;QD=33.60;ReadPosRankSum=2.651;VQSLOD=3.8206;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:26:30.06:497,30,0	1/1:1,7:8:15.05:254,15,0	0/0:37,0:35:86.68:0,87,1838	0/0:27,0:25:34.56:0,35,1064	1/1:3,25:28:32.55:577,33,0	1/1:0,26:26:66.23:1203,66,0	1/1:0,21:21:30.10:564,30,0	1/1:4,27:30:78.13:1353,78,0	1/1:1,16:17:39.13:725,39,0	1/1:1,26:27:78.25:1415,78,0	1/1:1,15:16:36.12:667,36,0	1/1:3,21:24:36.12:664,36,0	1/1:4,17:20:42.08:748,42,0	1/1:5,32:36:54.18:969,54,0	1/1:1,24:25:51.17:936,51,0	0/0:33,0:33:96.33:0,96,2520	1/1:2,11:13:24.04:414,24,0	0/0:12,0:12:33.11:0,33,891	1/1:2,18:19:54.14:973,54,0	1/1:2,16:18:36.12:648,36,0	0/1:5,17:23:15.58:347,0,16	1/1:0,19:19:27.09:450,27,0	1/1:2,7:9:18.02:303,18,0	1/1:0,23:23:14.95:284,15,0	1/1:1,18:19:36.12:637,36,0	1/1:0,24:24:69.24:1277,69,0	1/1:2,19:21:36.12:668,36,0	1/1:0,4:4:12.04:228,12,0
chr10	99211439	.	AAG	A	15622.62	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=7.490;DP=740;FS=1.862;HRun=0;HaplotypeScore=105.8400;InbreedingCoeff=0.9944;MQ=75.37;MQ0=7;MQRankSum=-1.235;QD=28.05;ReadPosRankSum=3.842;VQSLOD=6.0127;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,114,1847	1/1:2,11:13:30.10:379,30,0	0/0:42,0:26:20.29:0,20,293	0/0:53,1:33:64.02:0,64,832	1/1:3,18:21:51.09:609,51,0	1/1:2,30:32:63.20:795,63,0	1/1:4,20:24:55.90:716,56,0	1/1:16,28:44:78.18:949,78,0	1/1:2,14:16:42.13:529,42,0	1/1:3,22:25:66.18:804,66,0	1/1:2,19:21:54.13:663,54,0	1/1:3,31:34:71.87:905,72,0	1/1:2,19:21:54.17:681,54,0	1/1:0,20:19:54.17:681,54,0	1/1:8,33:41:78.25:984,78,0	0/0:24,0:24:60.19:0,60,966	1/1:3,22:25:60.19:757,60,0	0/0:20,0:20:48.16:0,48,797	1/1:3,9:12:30.07:353,30,0	1/1:4,18:22:48.15:606,48,0	1/1:1,27:28:25.48:859,25,0	1/1:1,22:23:63.15:776,63,0	1/1:6,15:22:41.97:506,42,0	1/1:6,24:30:57.18:719,57,0	1/1:3,13:16:27.09:341,27,0	1/1:3,28:31:84.26:1045,84,0	1/1:3,23:25:63.16:777,63,0	1/1:3,7:10:15.05:189,15,0
chr10	99211602	.	TACACACACACACCCACACCC	T	5705.83	PASS	AB=1.000;AC=41;AF=0.820;AN=50;BaseQRankSum=-2.216;DP=435;FS=31.271;HRun=0;HaplotypeScore=193.8775;InbreedingCoeff=0.3047;MQ=84.32;MQ0=7;MQRankSum=-2.546;QD=16.07;ReadPosRankSum=4.141;VQSLOD=2.3496;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:5.90:393,6,0	1/1:5,0:5:3.01:106,3,0	0/1:32,0:22:99:141,0,224	0/1:44,0:35:37.96:38,0,602	./.	1/1:16,0:16:27.05:372,27,0	1/1:17,0:17:29.99:465,30,0	1/1:21,0:21:9.09:426,9,0	1/1:9,0:9:17.27:304,17,0	1/1:18,0:18:30.07:421,30,0	./.	1/1:12,0:12:15.02:196,15,0	1/1:10,0:9:3.01:66,3,0	1/1:9,0:10:9.03:340,9,0	1/1:1,11:12:3.01:162,3,0	0/0:12,0:12:22.47:0,22,1076	1/1:12,0:12:17.73:283,18,0	0/0:14,0:13:21.98:0,22,362	1/1:8,0:8:6.02:98,6,0	0/0:18,0:18:2.97:0,3,20	1/1:25,0:24:49.96:684,50,0	1/1:21,0:20:6.02:195,6,0	1/1:15,1:16:9.03:359,9,0	./.	1/1:14,0:14:3.01:105,3,0	0/1:16,0:16:99:227,0,125	1/1:14,0:14:9.03:274,9,0	1/1:2,0:2:3.01:49,3,0
chr10	99211603	.	ACACACACACACCCACACC	A	6653.39	PASS	AB=1.000;AC=40;AF=0.833;AN=48;BaseQRankSum=-2.815;DP=437;FS=23.685;HRun=0;HaplotypeScore=175.3631;InbreedingCoeff=0.2320;MQ=83.02;MQ0=10;MQRankSum=-2.047;QD=18.74;ReadPosRankSum=4.082;VQSLOD=2.4309;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:14.28:424,14,0	1/1:0,5:5:3.01:150,3,0	0/1:32,0:22:99:141,0,223	0/1:43,0:34:37.96:38,0,602	./.	1/1:14,0:14:27.06:397,27,0	1/1:17,0:17:30.10:484,30,0	0/1:22,0:22:1.69:432,0,2	1/1:8,1:9:18.05:470,18,0	1/1:3,14:17:30.09:468,30,0	./.	1/1:13,0:12:15.02:236,15,0	1/1:10,0:8:3.01:92,3,0	1/1:3,7:10:9.03:415,9,0	1/1:12,0:12:3.01:130,3,0	0/0:12,0:12:22.83:0,23,955	1/1:12,1:12:17.97:338,18,0	0/0:15,0:14:18.88:0,19,266	1/1:8,0:8:6.02:98,6,0	./.	1/1:26,0:24:51.13:827,51,0	1/1:5,15:19:6.02:284,6,0	1/1:1,15:16:9.03:415,9,0	./.	1/1:3,11:14:3.01:150,3,0	0/1:17,0:17:95.33:227,0,95	1/1:4,10:14:9.03:387,9,0	1/1:2,0:2:3.01:49,3,0
chr10	99211605	.	ACACACACACCCACACC	A	6219.75	PASS	AB=1.000;AC=40;AF=0.833;AN=48;BaseQRankSum=-2.584;DP=426;FS=28.743;HRun=0;HaplotypeScore=158.3261;InbreedingCoeff=0.2177;MQ=79.71;MQ0=16;MQRankSum=-2.244;QD=18.08;ReadPosRankSum=3.945;VQSLOD=2.2829;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:19:27.88:440,28,0	1/1:5,0:5:3.01:118,3,0	0/1:30,0:20:99:141,0,210	0/1:41,0:32:37.96:38,0,602	./.	1/1:12,0:12:27.06:397,27,0	1/1:16,0:16:30.10:484,30,0	1/1:21,0:21:29.60:487,30,0	1/1:9,0:9:18.02:380,18,0	1/1:17,0:17:30.08:446,30,0	./.	1/1:11,0:10:15.02:209,15,0	1/1:4,7:8:3.01:137,3,0	1/1:10,0:10:9.03:337,9,0	0/1:12,0:12:24.95:110,0,25	0/0:13,0:12:22.35:0,22,839	1/1:12,0:11:17.98:310,18,0	0/0:16,0:15:10.74:0,11,185	1/1:6,0:6:6.02:98,6,0	./.	1/1:27,0:24:51.13:769,51,0	1/1:19,0:18:6.02:220,6,0	1/1:16,0:16:9.02:337,9,0	./.	1/1:14,0:14:3.01:118,3,0	0/1:17,0:17:50.16:232,0,50	1/1:14,0:14:9.03:366,9,0	1/1:3,0:2:3.01:49,3,0
chr10	99211613	.	ACCCACACC	A	5803.94	PASS	AB=1.000;AC=43;AF=0.896;AN=48;BaseQRankSum=-1.161;DP=377;FS=17.451;HRun=0;HaplotypeScore=100.2610;InbreedingCoeff=0.1447;MQ=68.76;MQ0=25;MQRankSum=-3.406;QD=18.25;ReadPosRankSum=2.950;VQSLOD=2.6700;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:17:19.36:429,19,0	1/1:5,0:5:3.01:62,3,0	0/1:26,0:16:99:141,0,214	0/1:33,0:24:37.96:38,0,599	./.	1/1:10,0:10:27.06:397,27,0	1/1:15,0:14:30.10:484,30,0	1/1:5,14:18:45.08:549,45,0	1/1:8,1:9:18.05:298,18,0	1/1:14,0:14:30.08:445,30,0	./.	1/1:9,0:8:15.02:198,15,0	1/1:10,0:7:3.01:63,3,0	1/1:8,1:9:9.03:171,9,0	1/1:13,0:12:6:83,6,0	0/0:10,0:9:22.40:0,22,533	1/1:10,0:9:17.99:263,18,0	0/1:17,0:16:10.36:334,0,10	1/1:3,0:2:6.02:98,6,0	./.	1/1:25,0:20:51.13:779,51,0	1/1:18,0:15:6.02:128,6,0	1/1:16,0:16:9.03:179,9,0	./.	1/1:11,0:11:3.01:62,3,0	1/1:1,11:12:24.06:367,24,0	1/1:10,1:11:9.03:188,9,0	1/1:3,0:2:3.01:49,3,0
chr10	99211972	.	G	GC	23729.77	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=0.453;DP=662;FS=1.467;HRun=0;HaplotypeScore=148.9785;InbreedingCoeff=0.9955;MQ=73.36;MQ0=0;MQRankSum=-9.019;QD=40.77;ReadPosRankSum=2.987;VQSLOD=4.2281;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,39:43:99:1656,102,0	1/1:1,11:12:30.10:477,30,0	0/0:22,0:22:32.51:0,33,711	0/0:16,0:16:19.79:0,20,578	1/1:1,21:22:57.11:862,57,0	1/1:2,20:22:60.19:930,60,0	1/1:3,26:28:63.20:981,63,0	1/1:7,29:36:99:1519,99,0	1/1:1,17:18:51.16:790,51,0	1/1:0,28:28:81.19:1211,81,0	1/1:2,20:22:48.16:752,48,0	1/1:0,13:13:30.10:478,30,0	1/1:2,34:36:96.33:1526,96,0	1/1:1,27:28:75.26:1194,75,0	1/1:1,34:35:96.31:1506,96,0	0/0:28,0:28:84.25:0,84,1125	1/1:1,18:19:48.16:763,48,0	0/0:14,0:14:42.11:0,42,567	1/1:0,24:24:72.16:1069,72,0	1/1:1,19:20:57.13:865,57,0	1/1:2,25:27:69.22:1055,69,0	1/1:0,19:19:54.12:830,54,0	1/1:1,15:16:45.15:702,45,0	1/1:1,16:17:35.76:546,36,0	1/1:0,22:22:60.20:954,60,0	1/1:0,32:32:95.90:1430,96,0	1/1:0,33:33:87.30:1386,87,0	1/1:2,7:9:17.55:248,18,0
chr10	99212007	.	GTC	G	14833.20	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=8.502;DP=573;FS=0.579;HRun=0;HaplotypeScore=207.7298;InbreedingCoeff=0.7778;MQ=58.99;MQ0=0;MQRankSum=-7.025;QD=27.88;ReadPosRankSum=1.831;VQSLOD=5.3118;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:38:95.92:912,96,0	1/1:0,8:8:21:195,21,0	0/0:12,0:12:23.22:0,23,386	0/1:9,0:9:24.97:25,0,130	1/1:1,24:25:65.92:622,66,0	1/1:1,20:21:63.01:615,63,0	1/1:0,22:22:66.07:709,66,0	1/1:0,31:31:93.23:1078,93,0	1/1:2,14:16:48:457,48,0	1/1:2,21:23:66.13:705,66,0	1/1:2,24:26:77.46:695,77,0	1/1:0,13:13:39.01:374,39,0	1/1:3,30:34:98.16:902,98,0	1/1:4,24:28:80.97:768,81,0	1/1:3,22:25:74.97:698,75,0	0/0:29,0:29:87.30:0,87,1754	1/1:0,17:17:51.02:505,51,0	1/1:1,16:17:45.11:562,45,0	1/1:3,11:14:42.04:435,42,0	1/1:1,20:21:62.95:569,63,0	1/1:0,16:16:41.97:387,42,0	1/1:1,15:16:39:389,39,0	1/1:1,16:17:51:511,51,0	1/1:2,11:13:24.45:253,24,0	1/1:0,19:19:54:514,54,0	1/1:4,24:28:84.16:867,84,0	1/1:2,20:23:61.64:675,62,0	1/1:0,12:12:36.09:409,36,0
chr10	99212010	.	A	AG	14830.60	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=8.207;DP=587;FS=0.000;HRun=0;HaplotypeScore=200.1251;InbreedingCoeff=0.9770;MQ=53.43;MQ0=0;MQRankSum=-6.494;QD=27.31;ReadPosRankSum=1.172;VQSLOD=4.2321;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,36:39:95.88:899,96,0	1/1:1,8:9:20.99:187,21,0	0/0:7,0:7:15.02:0,15,189	0/0:8,0:8:10.72:0,11,116	1/1:4,23:27:68.86:645,69,0	1/1:3,20:23:62.98:606,63,0	1/1:3,22:25:75.02:770,75,0	1/1:5,29:34:99:1154,101,0	1/1:3,14:17:50.99:510,51,0	1/1:2,21:23:69.09:706,69,0	1/1:2,24:26:75.35:644,75,0	1/1:1,13:14:41.97:386,42,0	1/1:4,31:35:99:906,101,0	1/1:2,24:26:74.95:713,75,0	1/1:4,21:25:74.87:671,75,0	0/0:29,0:29:87.29:0,87,1217	1/1:1,17:18:53.98:512,54,0	1/1:0,16:16:42.13:526,42,0	1/1:3,11:14:42.03:427,42,0	1/1:0,19:19:56.89:498,57,0	1/1:2,16:18:41.92:372,42,0	1/1:5,15:20:44.96:468,45,0	1/1:3,15:18:52.26:545,52,0	1/1:2,11:13:23.69:266,24,0	1/1:0,19:19:53.96:496,54,0	1/1:3,24:27:81.13:826,81,0	1/1:6,20:26:69.66:700,70,0	1/1:0,12:12:36.08:397,36,0
chr10	99214224	.	A	AG	6024.20	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=9.333;DP=341;FS=1.136;HRun=0;HaplotypeScore=222.6799;InbreedingCoeff=0.8928;MQ=56.38;MQ0=1;MQRankSum=-8.309;QD=21.91;ReadPosRankSum=-2.913;VQSLOD=3.5488;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:23.52:229,24,0	1/1:6,0:6:12.01:109,12,0	0/0:11,0:10:27.08:0,27,350	0/0:8,0:8:6:0,6,132	1/1:14,0:14:27.10:235,27,0	1/1:17,0:17:44.92:433,45,0	1/1:5,0:5:12:113,12,0	1/1:19,0:19:48.10:541,48,0	1/1:12,0:12:33.08:355,33,0	1/1:17,0:17:45:449,45,0	1/1:7,2:9:14.47:97,14,0	1/1:7,0:7:21.04:223,21,0	1/1:9,2:11:23.89:221,24,0	1/1:9,0:9:21.04:212,21,0	1/1:21,0:21:60.12:641,60,0	0/0:18,0:18:51.13:0,51,713	1/1:14,0:14:29.40:315,29,0	0/0:28,0:28:84.26:0,84,1157	1/1:14,0:13:35.97:351,36,0	1/1:9,0:9:20.69:163,21,0	1/1:16,0:16:9.69:65,10,0	1/1:10,0:10:23.96:233,24,0	1/1:7,1:7:17.87:166,18,0	1/1:16,0:16:29.64:278,30,0	1/1:5,0:5:14.95:145,15,0	1/1:6,0:6:18:168,18,0	1/1:10,0:10:23.96:235,24,0	1/1:2,0:2:5.99:48,6,0
chr10	99215273	.	ACACACACACACACACACACACACACACACG	A	3588.38	PASS	AB=0.892;AC=32;AF=0.640;AN=50;BaseQRankSum=0.320;DP=532;FS=0.699;HRun=0;HaplotypeScore=283.2440;InbreedingCoeff=0.3081;MQ=45.94;MQ0=30;MQRankSum=-0.637;QD=9.80;ReadPosRankSum=4.165;VQSLOD=2.1260;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:33:28.51:0,29,716	0/1:4,2:5:10.84:225,0,11	./.	./.	1/1:16,0:16:3.01:50,3,0	1/1:15,0:14:9.06:79,9,0	1/1:23,0:19:11.94:86,12,0	0/0:28,0:21:27.71:0,28,798	1/1:7,17:23:6.02:458,6,0	0/1:10,12:21:96.19:377,0,96	0/0:12,0:12:4.81:0,5,28	1/1:12,0:12:14.53:308,15,0	1/1:9,13:22:3.01:231,3,0	1/1:21,0:20:8.91:64,9,0	1/1:8,19:27:8.19:690,8,0	0/0:14,0:14:21.07:0,21,2604	0/1:19,1:17:19.84:271,0,20	0/0:24,0:23:39.21:0,39,2738	0/1:15,0:11:5.24:5,0,38	0/1:13,0:13:18.88:20,0,19	0/1:38,0:35:12.75:82,0,13	1/1:7,10:17:3.89:232,4,0	1/1:10,12:21:1.19:227,1,0	1/1:28,0:26:5.96:45,6,0	1/1:15,0:15:8.93:72,9,0	0/0:17,0:15:22.61:0,23,1130	1/1:10,0:10:8.95:67,9,0	./.
chr10	99215294	.	CA	C	442.42	PASS	AB=0.943;AC=12;AF=0.222;AN=54;BaseQRankSum=3.577;DP=493;FS=5.785;HRun=1;HaplotypeScore=117.4575;InbreedingCoeff=0.0758;MQ=47.32;MQ0=35;MQRankSum=-5.593;QD=2.51;ReadPosRankSum=5.532;VQSLOD=-0.3303;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:34:48.38:0,48,618	0/1:5,0:3:1.39:1,0,32	0/0:5,0:1:3:0,3,29	0/1:14,0:5:1.93:2,0,64	0/0:18,0:18:6.02:0,6,74	0/0:18,0:17:38.61:0,39,469	0/1:24,0:20:14.70:15,0,210	0/1:12,11:14:16.45:366,0,16	1/1:21,0:20:3.78:11,4,0	0/0:17,0:16:16.69:0,17,256	0/0:9,0:9:12.51:0,13,152	0/0:12,0:12:23.50:0,23,253	1/1:15,0:15:2.04:7,2,0	0/0:20,0:19:14.94:0,15,162	0/1:24,0:24:7.02:7,0,62	0/0:16,0:16:42.14:0,42,575	0/0:23,0:20:20.02:0,20,401	0/0:26,0:25:65.02:0,65,611	0/0:10,0:8:14.79:0,15,149	0/0:16,0:16:12.04:0,12,149	0/0:39,0:36:50.95:0,51,608	0/1:14,0:13:1.27:1,0,32	0/1:15,0:15:1.42:1,0,32	0/0:27,0:25:24.43:0,24,233	0/0:14,0:14:28.93:0,29,278	0/1:17,3:13:85.44:150,0,85	0/0:7,0:7:14.98:0,15,156	./.
chr10	99215301	.	ACG	A	2922.34	PASS	AB=0.875;AC=44;AF=0.846;AN=52;BaseQRankSum=-0.507;DP=405;FS=1.636;HRun=0;HaplotypeScore=90.8384;InbreedingCoeff=0.3290;MQ=49.19;MQ0=32;MQRankSum=2.617;QD=7.94;ReadPosRankSum=-2.242;VQSLOD=2.5973;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:35:50.34:410,50,0	1/1:4,0:2:2.90:16,3,0	0/0:7,0:2:5.88:0,6,36	0/1:18,0:9:13.37:54,0,13	0/1:0,12:12:0:0,0,0	1/1:10,0:9:20.97:173,21,0	1/1:16,0:12:14.98:125,15,0	0/1:23,0:17:28.90:99,0,29	1/1:20,0:19:5.78:32,6,0	0/1:15,0:14:1.98:114,0,2	1/1:7,0:7:12.89:102,13,0	1/1:8,0:8:23.69:169,24,0	1/1:13,0:13:2.90:16,3,0	1/1:14,0:13:14.93:115,15,0	1/1:20,0:20:11.65:67,12,0	0/0:19,0:19:38.43:0,38,369	1/1:14,0:12:29.66:209,30,0	1/1:23,1:23:38.98:373,39,0	1/1:4,8:9:12.97:144,13,0	./.	1/1:33,0:30:42.32:341,42,0	1/1:11,0:10:3.37:17,3,0	1/1:12,0:12:2.84:16,3,0	1/1:16,0:14:17.54:134,18,0	1/1:5,0:5:11.98:99,12,0	1/1:20,0:13:22.97:204,23,0	1/1:2,0:2:3:25,3,0	./.
chr10	99215303	.	GCA	G	473.18	PASS	AB=1.000;AC=24;AF=0.444;AN=54;BaseQRankSum=4.207;DP=419;FS=7.819;HRun=0;HaplotypeScore=100.2762;InbreedingCoeff=0.3022;MQ=49.12;MQ0=31;MQRankSum=-3.408;QD=1.81;ReadPosRankSum=3.616;VQSLOD=1.2018;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:36:0.06:1,0,0	1/1:4,0:2:2.84:14,3,0	0/0:9,0:4:9.03:0,9,131	0/0:19,0:10:22.27:0,22,158	0/1:12,0:12:0:0,0,0	0/1:9,0:8:0.01:0,0,0	0/1:17,0:13:0.08:0,0,0	1/1:20,5:19:25.92:231,26,0	1/1:19,0:18:5.68:27,6,0	1/1:14,0:14:2.81:14,3,0	0/0:7,0:7:2.33:0,2,17	0/1:8,0:8:4.52:7,0,5	1/1:13,0:13:2.84:14,3,0	0/0:14,0:13:1.25:0,1,3	0/1:22,0:22:26.52:27,0,34	0/0:19,0:19:45.03:0,45,574	0/1:16,0:13:11.40:11,0,12	0/0:25,0:24:2.03:0,2,111	0/0:11,0:8:5.28:0,5,29	./.	0/0:33,0:30:1.51:0,2,3	0/1:12,0:11:8.15:8,0,19	1/1:12,0:12:2.78:14,3,0	1/1:18,0:16:2.24:7,2,0	0/0:6,0:6:3.47:0,3,26	1/1:13,7:13:21.51:238,22,0	0/0:3,0:3:2.84:0,3,23	0/0:2,1:1:1.55:0,2,4
chr10	99215478	.	ACTCT	A	3008.74	PASS	AB=0.547;AC=5;AF=0.089;AN=56;BaseQRankSum=10.302;DP=636;FS=21.151;HRun=0;HaplotypeScore=103.4599;InbreedingCoeff=0.7786;MQ=74.60;MQ0=2;MQRankSum=-5.105;QD=39.59;ReadPosRankSum=-1.512;VQSLOD=1.7610;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:78.24:0,78,1812	0/0:9,0:9:21.07:0,21,464	0/0:34,0:26:54.14:0,54,1120	0/0:22,0:18:39.06:0,39,839	0/0:30,0:30:81.28:0,81,2001	0/0:20,0:20:48.16:0,48,1143	0/0:18,0:18:45.15:0,45,1106	1/1:4,27:31:78.17:1269,78,0	0/0:20,0:20:51.17:0,51,1276	0/0:27,0:27:72.25:0,72,1795	0/0:12,0:12:30.10:0,30,747	0/0:21,0:21:60.21:0,60,1503	0/0:17,0:17:42.14:0,42,1081	0/0:29,0:29:66.21:0,66,1594	0/0:33,0:33:84.27:0,84,2034	0/0:21,0:21:57.20:0,57,1446	0/0:24,0:24:72.24:0,72,1696	0/0:12,0:12:33.11:0,33,848	0/0:14,0:14:33.11:0,33,806	0/0:27,0:27:69.21:0,69,1636	0/0:25,0:25:72.25:0,72,1859	0/0:20,0:20:57.19:0,57,1349	0/0:16,0:16:45.15:0,45,1161	0/0:31,0:31:81.25:0,81,1947	0/0:25,0:25:72.24:0,72,1735	0/1:5,24:29:76.73:1140,0,77	0/0:22,0:22:54.18:0,54,1320	1/1:2,14:16:42.14:729,42,0
chr10	99215997	.	CT	C	639.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.763;DP=677;FS=1.879;HRun=3;HaplotypeScore=64.9304;InbreedingCoeff=0.9880;MQ=77.39;MQ0=0;MQRankSum=-1.191;QD=24.60;ReadPosRankSum=2.184;VQSLOD=2.9596;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:53.89:734,54,0	0/0:7,0:7:21.07:0,21,302	0/0:20,0:19:56.47:0,56,671	0/0:20,0:21:55.92:0,56,697	0/0:28,0:27:75.23:0,75,1043	0/0:24,0:24:72.24:0,72,1035	0/0:22,0:22:63.21:0,63,902	0/0:36,0:36:99:0,102,1372	0/0:22,0:22:63.19:0,63,888	0/0:31,0:31:87.28:0,87,1225	0/0:28,0:28:75.25:0,75,1077	0/0:19,0:19:54.18:0,54,777	0/0:31,0:31:90.29:0,90,1276	0/0:17,0:17:51.16:0,51,718	0/0:23,0:23:69.21:0,69,959	0/0:29,0:29:87.27:0,87,1217	0/0:24,0:24:69.21:0,69,970	0/0:21,0:21:57.19:0,57,821	0/0:21,0:21:60.18:0,60,831	0/0:35,0:34:96.32:0,96,1380	0/0:21,0:21:57.19:0,57,820	0/0:24,0:24:69.23:0,69,992	0/0:26,0:26:66.22:0,66,950	0/0:33,0:33:96.32:0,96,1381	0/0:17,0:17:36.11:0,36,500	0/0:35,0:35:99:0,99,1410	0/0:28,0:28:78.26:0,78,1120	0/0:8,0:8:18.06:0,18,259
chr10	99216329	.	A	AAAAAC	24704.52	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=8.149;DP=723;FS=2.084;HRun=0;HaplotypeScore=254.0309;InbreedingCoeff=0.9755;MQ=46.04;MQ0=7;MQRankSum=-9.688;QD=40.57;ReadPosRankSum=0.404;VQSLOD=4.5798;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:38:86.62:1490,87,0	1/1:10,0:10:23.92:372,24,0	0/0:26,0:17:46.67:0,47,761	0/0:30,0:19:33.90:0,34,721	1/1:26,0:25:59.90:1138,60,0	1/1:23,0:22:48.15:951,48,0	1/1:25,0:23:54.15:1067,54,0	1/1:15,15:29:57.19:1406,57,0	1/1:19,0:19:40.68:746,41,0	1/1:28,0:26:62.62:1042,63,0	1/1:19,0:18:42.14:897,42,0	1/1:27,0:26:59.18:1142,59,0	1/1:36,0:36:89.52:1642,90,0	1/1:25,0:24:48.78:938,49,0	1/1:35,0:34:72.77:1471,73,0	0/0:30,0:30:7.51:0,8,1227	1/1:19,0:19:34.82:597,35,0	0/0:28,0:28:63.21:0,63,1200	1/1:22,0:19:42.08:756,42,0	1/1:28,0:27:64.31:1144,64,0	1/1:20,0:20:38.03:610,38,0	1/1:28,0:25:62.02:1242,62,0	1/1:22,0:21:46.71:972,47,0	1/1:20,0:19:28.77:447,29,0	1/1:27,0:27:31.91:613,32,0	1/1:8,20:28:69.23:1773,69,0	1/1:38,0:38:91.29:1631,91,0	1/1:1,10:11:21.07:618,21,0
chr10	99216339	.	C	CAAAACAA	33133.56	PASS	AB=0.816;AC=39;AF=0.696;AN=56;BaseQRankSum=-3.602;DP=717;FS=36.379;HRun=0;HaplotypeScore=217.7440;InbreedingCoeff=0.0694;MQ=48.82;MQ0=3;MQRankSum=-8.920;QD=52.18;ReadPosRankSum=10.003;VQSLOD=2.8035;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,16:40:24.43:2216,24,0	1/1:6,3:9:6.87:497,7,0	0/0:28,0:21:53.40:0,53,1017	0/0:28,0:23:46.18:0,46,1098	1/1:11,14:25:22.58:1666,23,0	0/1:11,9:19:8.80:987,0,9	1/1:13,11:23:0.27:1368,0,0	0/1:31,0:30:99:494,0,310	0/1:12,9:21:4.71:1177,0,5	0/1:16,9:23:0.38:1376,0,0	0/1:9,7:15:16.48:805,0,16	1/1:13,13:25:20.11:1651,20,0	1/1:14,24:39:69.93:3246,70,0	0/1:18,7:24:39.05:943,0,39	1/1:17,17:33:48.52:2390,49,0	0/1:26,1:27:42.52:43,0,1694	1/1:11,8:19:4.54:1106,5,0	0/0:25,0:25:75.15:0,75,1648	0/1:13,9:21:17.60:1096,0,18	1/1:14,13:26:40.88:1875,41,0	1/1:17,5:22:13.79:1014,14,0	1/1:11,16:24:32.41:1999,32,0	1/1:7,14:20:39.92:1739,40,0	1/1:15,4:18:4.16:682,4,0	0/1:14,7:21:2.92:943,0,3	0/1:30,0:30:99:688,0,255	1/1:21,19:41:59.89:2862,60,0	0/1:17,0:18:99:271,0,201
chr10	99216341	.	AC	A	6691.85	PASS	AB=0.848;AC=24;AF=0.429;AN=56;BaseQRankSum=12.897;DP=716;FS=46.002;HRun=1;HaplotypeScore=242.5716;InbreedingCoeff=-0.6248;MQ=49.30;MQ0=3;MQRankSum=-7.692;QD=11.40;ReadPosRankSum=8.783;VQSLOD=1.0728;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:35,9:40:99:438,0,275	0/1:7,1:8:56.88:166,0,57	0/0:27,1:22:50.24:0,50,729	0/0:29,1:23:48.75:0,49,813	0/1:20,6:25:95.98:257,0,96	0/1:20,2:21:99:188,0,229	0/1:21,4:24:99:232,0,243	0/1:33,0:32:28.60:29,0,690	0/1:16,5:21:99:263,0,238	0/1:17,8:23:99:377,0,252	0/1:14,2:15:89.38:89,0,227	0/1:23,5:27:99:347,0,138	0/1:34,4:39:79.36:634,0,79	0/1:18,5:22:99:195,0,226	0/1:25,7:31:99:611,0,103	0/0:27,0:27:59.67:0,60,1157	0/1:15,3:18:99:228,0,183	0/0:26,0:26:75.25:0,75,1181	0/1:19,3:21:99:244,0,191	0/1:17,8:24:58.56:431,0,59	0/1:15,5:20:99:254,0,169	0/1:22,5:24:74.12:360,0,74	1/1:18,3:20:5.22:291,5,0	0/1:13,5:17:99:207,0,134	0/1:15,6:21:99:174,0,230	0/1:32,0:32:24.77:25,0,619	0/1:32,9:41:99:654,0,100	0/0:18,0:18:35.51:0,36,386
chr10	99216345	.	CAA	C	5682.92	PASS	AB=0.777;AC=36;AF=0.643;AN=56;BaseQRankSum=11.048;DP=723;FS=3.308;HRun=10;HaplotypeScore=258.0233;InbreedingCoeff=0.3725;MQ=52.13;MQ0=3;MQRankSum=-10.272;QD=10.22;ReadPosRankSum=8.810;VQSLOD=-0.5814;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:30,13:39:32.03:298,0,32	1/1:6,4:10:13.96:94,14,0	0/1:25,1:20:5.35:5,0,391	0/0:28,1:24:48.63:0,49,699	1/1:21,4:24:35.46:319,35,0	1/1:12,11:22:41.02:305,41,0	1/1:15,11:25:45.29:357,45,0	0/0:35,0:35:94.28:0,94,1284	1/1:14,8:22:14.82:282,15,0	0/1:17,9:24:54.58:325,0,55	1/1:10,7:17:39.13:320,39,0	1/1:19,9:27:1.56:240,2,0	0/1:31,7:38:19.04:319,0,19	0/1:14,8:21:37.60:251,0,38	1/1:26,6:31:23.32:294,23,0	0/0:26,0:27:65.17:0,65,1018	1/1:12,6:18:6.96:232,7,0	0/0:27,0:27:63.20:0,63,971	1/1:14,9:22:38.83:345,39,0	1/1:21,4:24:16.12:276,16,0	0/1:10,9:19:13.16:217,0,13	1/1:21,6:24:22.68:243,23,0	1/1:17,6:22:15.88:194,16,0	0/1:10,8:17:2.93:193,0,3	1/1:13,9:22:10.08:264,10,0	0/0:30,0:30:86.87:0,87,1270	0/1:32,11:43:70.96:308,0,71	0/0:15,0:18:40.98:0,41,564
chr10	99216347	.	A	AC	8658.50	PASS	AB=0.710;AC=23;AF=0.411;AN=56;BaseQRankSum=17.017;DP=724;FS=15.042;HRun=0;HaplotypeScore=239.1404;InbreedingCoeff=-0.3728;MQ=53.40;MQ0=3;MQRankSum=-10.777;QD=16.31;ReadPosRankSum=10.506;VQSLOD=3.7957;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:25,17:38:96.82:510,0,97	0/1:6,3:9:44.67:103,0,45	0/0:24,0:19:50.11:0,50,508	0/0:29,0:25:63.15:0,63,712	1/1:10,15:24:16.69:467,17,0	0/1:15,9:23:21.23:309,0,21	0/1:15,11:25:38.43:399,0,38	0/0:37,0:36:47.15:0,47,898	0/1:14,9:23:87.23:348,0,87	0/1:18,9:25:99:348,0,181	0/1:10,7:16:30.08:228,0,30	0/1:16,13:28:64.31:469,0,64	0/1:13,25:38:61.39:904,0,61	0/1:16,7:22:99:224,0,112	0/1:15,17:31:99:611,0,139	0/0:28,1:29:42.96:0,43,972	0/1:9,8:17:47.73:304,0,48	0/0:27,0:27:78.10:0,78,965	0/1:13,10:22:1.85:472,0,2	0/1:12,13:24:85.61:466,0,86	0/1:14,5:19:86.93:163,0,87	0/1:11,16:24:7.25:627,0,7	1/1:10,14:23:5.43:566,5,0	0/1:13,4:16:79.53:140,0,80	0/1:15,7:22:58.77:277,0,59	0/0:30,0:30:62.97:0,63,735	0/1:22,20:42:99:724,0,156	0/0:17,0:17:28.62:0,29,313
chr10	99216535	.	ACT	A	1716.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.883;DP=780;FS=0.000;HRun=0;HaplotypeScore=94.4555;InbreedingCoeff=0.9999;MQ=84.81;MQ0=3;MQRankSum=-3.409;QD=32.38;ReadPosRankSum=1.340;VQSLOD=5.4873;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,52:50:99:1811,123,0	0/0:14,0:14:39.13:0,39,730	0/0:23,0:23:62.69:0,63,1102	0/0:32,0:32:90.31:0,90,1581	0/0:28,0:28:84.29:0,84,1571	0/0:36,0:36:99:0,105,1900	0/0:33,0:33:99:0,99,1769	0/0:32,0:32:96.33:0,96,1792	0/0:28,0:28:84.29:0,84,1546	0/0:26,0:26:78.27:0,78,1456	0/0:30,0:30:90.31:0,90,1680	0/0:27,0:27:81.28:0,81,1516	0/0:38,0:38:99:0,111,2067	0/0:30,0:30:87.30:0,87,1557	0/0:31,0:31:93.32:0,93,1740	0/0:20,0:20:60.21:0,60,1118	0/0:34,0:34:99:0,102,1909	0/0:15,0:15:45.15:0,45,836	0/0:26,0:26:78.27:0,78,1448	0/0:27,0:27:75.24:0,75,1359	0/0:27,0:27:72.23:0,72,1304	0/0:25,0:22:63.22:0,63,1174	0/0:16,0:16:48.16:0,48,899	0/0:31,0:31:93.32:0,93,1721	0/0:22,0:22:66.23:0,66,1236	0/0:30,0:30:90.30:0,90,1653	0/0:30,0:29:90.29:0,90,1615	0/0:16,0:16:48.15:0,48,855
chr10	99217633	.	T	TTTG	2966.81	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.524;DP=718;FS=0.498;HRun=0;HaplotypeScore=96.1502;InbreedingCoeff=0.9925;MQ=65.82;MQ0=2;MQRankSum=-0.109;QD=37.09;ReadPosRankSum=-2.796;VQSLOD=3.7205;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,114,1510	0/0:6,0:6:18.06:0,18,260	0/0:33,0:26:50.06:0,50,636	0/0:12,0:10:20.63:0,21,210	0/0:28,0:28:62.69:0,63,857	0/0:30,0:30:87.28:0,87,1237	0/0:21,0:21:48.03:0,48,644	1/1:8,25:35:82.09:1353,82,0	0/0:26,0:26:67.74:0,68,905	0/0:21,0:21:45.14:0,45,622	0/0:13,0:13:33.10:0,33,458	0/0:24,0:24:54.18:0,54,780	0/0:33,0:33:77.72:0,78,1026	0/0:22,0:22:60.18:0,60,829	0/0:31,0:31:81.14:0,81,1006	0/0:24,0:24:54.15:0,54,729	0/0:17,0:17:45.13:0,45,606	0/0:24,0:24:66.16:0,66,876	0/0:31,0:31:66.09:0,66,794	0/0:34,0:34:99:0,99,1364	0/0:37,0:37:93.27:0,93,1273	0/0:23,0:23:63.16:0,63,809	0/0:13,0:13:36.11:0,36,500	0/0:31,0:31:84.23:0,84,1169	0/0:22,0:22:57.19:0,57,823	1/1:5,26:32:81.19:1390,81,0	0/0:37,0:37:93.29:0,93,1307	1/1:3,10:13:18.06:365,18,0
chr10	99218187	.	G	GA	1135.54	PASS	AB=0.933;AC=7;AF=0.125;AN=56;BaseQRankSum=-6.586;DP=420;FS=3.866;HRun=4;HaplotypeScore=49.2388;InbreedingCoeff=0.8222;MQ=97.51;MQ0=0;MQRankSum=-3.153;QD=18.93;ReadPosRankSum=-0.977;VQSLOD=2.7549;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:48.07:0,48,512	0/0:6,0:6:18.03:0,18,192	0/0:30,0:30:71.17:0,71,762	0/0:19,0:19:48.11:0,48,525	0/0:16,0:16:45.13:0,45,510	0/0:16,0:16:27.07:0,27,306	0/0:18,0:18:36.07:0,36,391	1/1:8,12:20:36.09:460,36,0	0/0:14,0:14:36.08:0,36,398	0/0:21,0:21:51.10:0,51,553	0/0:7,0:7:21.06:0,21,238	0/0:9,0:9:21.04:0,21,228	0/0:14,0:14:39.08:0,39,421	0/0:13,0:13:32.68:0,33,373	0/0:14,0:14:39.11:0,39,440	0/0:8,0:8:18.05:0,18,204	0/0:19,0:19:45.13:0,45,509	0/1:13,1:14:7.96:8,0,292	0/0:15,0:15:42.10:0,42,462	0/0:16,0:16:30.08:0,30,340	0/0:17,0:17:42.07:0,42,453	0/0:11,0:11:26.89:0,27,297	0/0:10,0:10:27.06:0,27,296	0/0:19,0:19:45.10:0,45,489	0/0:12,0:12:24.07:0,24,272	1/1:4,13:17:8.10:482,8,0	0/0:11,0:11:33.09:0,33,373	1/1:2,7:9:24.08:326,24,0
chr10	99218738	.	C	CTTT	7895.57	PASS	AB=0.712;AC=42;AF=0.750;AN=56;BaseQRankSum=-5.033;DP=486;FS=4.838;HRun=13;HaplotypeScore=123.0512;InbreedingCoeff=0.7501;MQ=61.69;MQ0=1;MQRankSum=-0.030;QD=20.78;ReadPosRankSum=-2.825;VQSLOD=3.0570;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:21:53.01:61,0,53	1/1:8,3:14:26.66:386,27,0	0/0:11,0:5:1.07:0,1,9	0/0:11,0:10:3.53:0,4,63	1/1:16,6:24:47.74:585,48,0	1/1:8,9:26:41.15:510,41,0	1/1:9,5:17:30.93:442,31,0	0/0:10,0:37:46.35:0,46,387	1/1:2,7:11:18.04:289,18,0	1/1:9,5:14:27.05:385,27,0	1/1:6,9:16:35.78:512,36,0	1/1:17,3:19:38.91:507,39,0	1/1:6,0:7:14.98:147,15,0	1/1:12,2:15:30.03:383,30,0	1/1:4,8:14:24.91:385,25,0	0/1:11,0:14:0.79:1,0,142	1/1:4,2:15:21.01:254,21,0	0/0:3,0:16:27.59:0,28,229	1/1:18,0:21:28.62:248,29,0	1/1:20,5:25:53.78:643,54,0	1/1:2,1:5:6:60,6,0	1/1:10,2:12:12.50:185,12,0	1/1:6,20:32:45.14:514,45,0	1/1:5,2:9:18.04:239,18,0	1/1:10,4:15:26.08:351,26,0	0/0:5,0:17:19.07:0,19,162	1/1:24,4:30:71.61:809,72,0	0/0:4,0:11:25.18:0,25,143
chr10	99219453	.	GC	G	690.95	PASS	AB=0.881;AC=7;AF=0.125;AN=56;BaseQRankSum=4.117;DP=506;FS=4.381;HRun=9;HaplotypeScore=70.3270;InbreedingCoeff=0.4549;MQ=71.25;MQ0=55;MQRankSum=-1.587;QD=7.94;ReadPosRankSum=2.901;VQSLOD=1.6025;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:21:51.15:0,51,588	0/0:3,0:3:6.02:0,6,69	0/1:20,1:11:9.21:9,0,122	0/0:31,0:22:2.47:0,2,145	0/0:20,0:18:18.04:0,18,198	0/0:10,0:10:21.06:0,21,239	0/0:19,0:16:12.03:0,12,138	0/1:16,8:24:18.15:211,0,18	0/0:23,0:20:36.10:0,36,407	0/0:18,0:15:33.09:0,33,373	0/0:16,0:14:12.02:0,12,129	0/1:14,1:13:0.42:0,0,227	0/0:12,0:9:24.03:0,24,262	0/0:16,0:14:18.04:0,18,198	0/0:16,0:14:17.90:0,18,196	0/0:11,0:11:30.04:0,30,323	0/0:17,0:15:23.90:0,24,254	0/0:16,0:14:35.94:0,36,395	0/0:21,1:22:14.65:0,15,412	0/0:14,0:13:21.05:0,21,231	0/0:25,0:21:12.04:0,12,138	0/0:16,0:15:24.07:0,24,273	0/0:15,0:13:18.05:0,18,200	0/0:22,0:16:6.02:0,6,69	0/0:11,0:11:9.02:0,9,101	1/1:2,13:15:36.01:329,36,0	0/0:27,0:21:21.06:0,21,242	1/1:2,9:11:30.02:274,30,0
chr10	99219474	.	G	GTT	1602	PASS	AB=1.000;AC=7;AF=0.135;AN=52;BaseQRankSum=-5.324;DP=419;FS=20.713;HRun=0;HaplotypeScore=78.6577;InbreedingCoeff=0.6231;MQ=51.26;MQ0=69;MQRankSum=0.891;QD=20.54;ReadPosRankSum=3.187;VQSLOD=1.6972;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:13:18.62:0,19,167	0/0:5,0:3:2.98:0,3,22	0/0:24,0:8:19.76:0,20,201	0/0:38,0:11:14.80:0,15,160	0/0:13,0:11:0:0,0,0	0/0:8,0:8:8.95:0,9,67	0/0:14,0:11:5.97:0,6,44	1/1:9,9:17:11.17:526,11,0	0/0:15,0:12:11.93:0,12,87	0/0:13,0:10:14.93:0,15,115	./.	0/0:12,0:10:8.96:0,9,70	0/0:11,0:8:14.91:0,15,110	0/0:10,0:8:5.93:0,6,40	0/0:5,0:10:11.94:0,12,91	0/0:8,0:8:18.05:0,18,214	0/0:17,0:14:12.36:0,12,84	0/0:19,0:15:33.05:0,33,354	0/0:11,0:11:20.87:0,21,155	0/0:10,0:9:0:0,0,0	./.	0/0:8,0:7:2.97:0,3,20	0/0:10,0:8:5.96:0,6,45	0/1:21,0:15:0.01:0,0,0	0/0:8,0:7:3.85:0,4,22	1/1:12,6:17:40.49:737,40,0	0/0:19,0:13:11.94:0,12,91	1/1:17,3:16:13.44:468,13,0
chr10	99219517	.	AGAGAGAGACC	A	9825.78	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=0.608;DP=527;FS=19.124;HRun=0;HaplotypeScore=147.3202;InbreedingCoeff=0.5702;MQ=59.12;MQ0=16;MQRankSum=1.965;QD=22.69;ReadPosRankSum=1.967;VQSLOD=3.0425;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:29:99:384,0,113	1/1:9,0:8:3.01:37,3,0	0/0:19,0:8:21.01:0,21,302	0/0:30,0:13:6.17:0,6,376	1/1:12,2:14:14.79:232,15,0	1/1:11,0:11:18.06:266,18,0	1/1:15,1:15:36.12:630,36,0	0/1:28,0:28:99:691,0,180	1/1:18,0:18:15.03:260,15,0	1/1:2,18:20:50.16:734,50,0	1/1:11,0:11:17.97:218,18,0	1/1:16,0:16:2.90:16,3,0	1/1:19,1:20:36.12:706,36,0	1/1:17,0:17:8.99:151,9,0	1/1:19,0:19:36.12:593,36,0	0/0:13,0:13:24.08:0,24,825	1/1:15,1:16:30.07:563,30,0	0/0:19,0:19:48.02:0,48,1230	1/1:7,19:25:56.51:890,57,0	1/1:18,0:18:32.39:388,32,0	1/1:17,0:17:3.01:49,3,0	1/1:15,0:15:36.11:546,36,0	1/1:21,0:21:33.11:539,33,0	1/1:25,1:25:29.63:419,30,0	1/1:12,0:12:15.05:233,15,0	0/1:30,0:29:99:540,0,415	1/1:20,1:20:39.05:738,39,0	0/0:13,0:12:11.53:0,12,187
chr10	99219525	.	ACC	A	11551.32	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=0.823;DP=456;FS=6.637;HRun=2;HaplotypeScore=78.4552;InbreedingCoeff=0.8333;MQ=67.66;MQ0=11;MQRankSum=-2.606;QD=30.89;ReadPosRankSum=0.689;VQSLOD=4.3689;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:24,3:27:54.16:743,54,0	1/1:1,5:6:3.01:36,3,0	0/0:21,0:10:15.05:0,15,341	0/0:32,0:15:12.96:0,13,469	1/1:8,3:11:17.19:238,17,0	1/1:9,3:12:27.09:401,27,0	1/1:14,3:17:48.16:700,48,0	1/1:2,22:24:65.87:953,66,0	1/1:0,15:15:15.05:178,15,0	1/1:19,0:19:52:707,52,0	1/1:14,0:14:36.11:529,36,0	1/1:0,12:12:3.01:35,3,0	1/1:12,2:14:39.13:568,39,0	1/1:1,14:15:8.99:91,9,0	1/1:17,1:18:34.49:553,34,0	0/0:12,0:12:30.10:0,30,503	1/1:12,3:15:42.14:584,42,0	0/0:17,0:17:45.07:0,45,621	1/1:23,0:22:59.63:865,60,0	1/1:14,2:16:39.04:541,39,0	1/1:0,14:14:3.01:32,3,0	1/1:11,2:13:36.11:517,36,0	1/1:14,1:15:39.13:584,39,0	1/1:19,1:20:33.05:443,33,0	1/1:6,0:6:18.06:279,18,0	1/1:22,1:23:69.18:1032,69,0	1/1:15,1:16:45.15:667,45,0	1/1:9,0:8:18.95:274,19,0
chr10	99220097	.	T	TGCACACATGCAC	21355.72	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-7.632;DP=867;FS=4.127;HRun=0;HaplotypeScore=206.0279;InbreedingCoeff=0.6988;MQ=55.98;MQ0=0;MQRankSum=-9.127;QD=27.77;ReadPosRankSum=4.683;VQSLOD=3.7189;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,35:56:17.25:941,17,0	1/1:0,3:3:3.01:178,3,0	0/0:24,0:22:42.85:0,43,843	0/0:31,0:30:28.92:0,29,988	1/1:4,17:23:8.02:531,8,0	1/1:4,16:23:18.06:1055,18,0	1/1:15,23:44:6.02:271,6,0	1/1:38,0:33:54.11:1184,54,0	1/1:4,31:37:27.56:1599,28,0	1/1:6,35:43:78.22:2844,78,0	1/1:5,13:24:5.97:355,6,0	1/1:12,40:58:32.70:1935,33,0	1/1:9,29:42:24.08:1421,24,0	1/1:4,33:42:15.52:889,16,0	1/1:3,26:32:21.07:1244,21,0	0/0:22,0:22:48.16:0,48,1351	1/1:8,15:26:6.49:357,6,0	0/0:21,0:21:54.15:0,54,1466	1/1:8,12:21:39.05:1398,39,0	1/1:3,16:22:5.81:191,6,0	1/1:28,35:73:2.97:31,3,0	1/1:4,15:20:12.04:709,12,0	1/1:1,14:16:5.26:354,5,0	1/1:5,22:32:9.03:533,9,0	1/1:8,22:34:6.02:356,6,0	1/1:3,26:32:59.64:2097,60,0	1/1:3,15:19:9.03:529,9,0	1/1:3,5:8:6.02:356,6,0
chr10	99220596	.	G	GTGTC	1119.42	PASS	AB=1.000;AC=20;AF=0.370;AN=54;BaseQRankSum=6.290;DP=564;FS=1.906;HRun=0;HaplotypeScore=153.2721;InbreedingCoeff=-0.1706;MQ=41.67;MQ0=16;MQRankSum=-2.375;QD=3.22;ReadPosRankSum=-2.388;VQSLOD=2.4612;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,5:27:1.87:203,2,0	0/0:12,0:11:0.82:0,1,2	0/0:17,0:1:2.99:0,3,24	0/0:24,0:5:10.97:0,11,85	0/0:12,0:12:3:0,3,25	0/0:19,0:18:10.53:0,11,87	0/0:28,0:26:23.02:0,23,188	0/1:20,0:16:63.38:187,0,63	0/0:19,0:19:8.72:0,9,70	0/1:13,0:13:61.74:111,0,62	0/0:7,0:7:0:0,0,0	1/1:33,0:31:3.94:202,4,0	0/1:22,0:19:48.09:60,0,48	0/1:27,0:26:25.38:25,0,110	0/1:19,0:18:31.07:88,0,31	0/0:20,0:20:56.75:0,57,683	0/1:16,0:15:7.35:7,0,34	0/1:27,0:27:88.27:88,0,90	0/1:23,0:20:50.20:50,0,124	./.	0/0:37,0:32:2.78:0,3,24	0/0:12,0:11:5.99:0,6,50	1/1:9,0:8:0.46:2,0,0	0/1:37,0:35:33.57:34,0,41	0/1:24,0:24:32.73:33,0,70	0/1:26,0:25:87.67:88,0,131	0/1:18,0:17:28.92:29,0,83	1/1:7,0:7:8.89:59,9,0
chr10	99220606	.	GTC	G	427.35	PASS	AB=0.986;AC=22;AF=0.423;AN=52;BaseQRankSum=-4.348;DP=560;FS=22.005;HRun=0;HaplotypeScore=140.2107;InbreedingCoeff=-0.1757;MQ=42.64;MQ0=17;MQRankSum=0.132;QD=1.07;ReadPosRankSum=-1.788;VQSLOD=0.8909;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,3:28:29.36:84,0,29	0/1:11,0:10:5.06:15,0,5	0/0:27,0:6:0.08:0,0,74	0/0:27,0:7:14.52:0,15,111	./.	1/1:21,0:20:2.94:46,3,0	1/1:23,0:21:3.34:22,3,0	0/0:19,0:15:7.17:0,7,208	0/1:16,0:16:1.71:2,0,2	0/0:14,0:14:27.99:0,28,229	0/0:8,0:8:2.75:0,3,24	0/1:32,0:30:24.64:25,0,197	0/1:21,0:18:37.06:37,0,46	0/1:26,0:25:41.15:41,0,85	0/1:20,0:19:24.73:25,0,99	0/0:18,0:18:26.26:0,26,580	0/1:16,0:15:6.59:19,0,7	0/1:27,2:29:65.28:65,0,77	0/1:22,0:20:6.82:7,0,138	./.	0/1:36,0:32:0:0,0,0	1/1:10,0:9:3:25,3,0	1/1:10,0:9:2.60:25,3,0	0/1:38,0:37:65.68:66,0,91	0/1:22,1:23:31.10:31,0,70	0/0:24,0:23:2.21:0,2,231	0/1:19,0:18:34.34:34,0,81	0/0:5,0:5:11.42:0,11,58
chr10	99220608	.	C	CTG	214.35	PASS	AB=0.949;AC=16;AF=0.308;AN=52;BaseQRankSum=-0.164;DP=545;FS=14.668;HRun=0;HaplotypeScore=139.4412;InbreedingCoeff=0.1874;MQ=43.17;MQ0=17;MQRankSum=-1.782;QD=0.79;ReadPosRankSum=1.624;VQSLOD=2.0962;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:29.24:29,0,47	0/0:8,0:7:0:0,0,0	0/0:28,0:7:17.49:0,17,173	0/0:28,0:9:15.04:0,15,135	./.	0/1:19,0:18:0:0,0,0	1/1:22,0:20:2.60:19,3,0	0/0:18,0:14:33.46:0,33,323	1/1:17,0:17:2.50:10,2,0	0/0:14,0:14:4.13:0,4,172	0/0:7,0:7:3.01:0,3,32	0/0:33,0:31:14.34:0,14,340	0/1:22,0:19:1.76:42,0,2	0/1:25,0:24:19.46:19,0,124	0/0:21,0:20:10.48:0,10,165	0/0:16,0:16:48.16:0,48,645	0/0:16,0:15:3.41:0,3,21	0/1:9,19:28:50.67:157,0,51	0/0:20,0:18:9.85:0,10,231	./.	0/1:35,0:32:0:0,0,0	1/1:10,0:9:1.25:3,1,0	1/1:10,0:9:3:25,3,0	0/1:38,0:37:24.84:25,0,128	0/0:23,0:23:14.52:0,15,141	0/0:24,0:23:31.63:0,32,268	0/1:18,0:18:18.14:18,0,95	0/0:5,0:5:12.01:0,12,112
chr10	99220612	.	GTC	G	1707.76	PASS	AB=0.992;AC=38;AF=0.704;AN=54;BaseQRankSum=0.835;DP=546;FS=2.769;HRun=0;HaplotypeScore=129.9772;InbreedingCoeff=0.1215;MQ=44.96;MQ0=17;MQRankSum=1.312;QD=3.48;ReadPosRankSum=-1.293;VQSLOD=1.9890;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,4:28:8:52,8,0	0/0:6,0:5:4.07:0,4,12	0/1:33,0:9:14.49:14,0,205	0/1:28,0:9:8.30:8,0,290	./.	0/0:20,0:19:0.88:0,1,4	1/1:25,0:23:4.66:24,5,0	1/1:19,0:15:15.52:144,16,0	0/1:17,0:17:1.22:16,0,1	0/1:13,0:13:46.17:82,0,46	1/1:7,0:7:2.90:16,3,0	1/1:32,0:30:32.19:261,32,0	0/1:20,0:17:7.67:8,0,36	1/1:25,0:24:17.66:156,18,0	1/1:20,0:19:20.40:119,20,0	0/0:16,0:16:47.93:0,48,827	1/1:17,0:16:4.22:42,4,0	0/1:26,2:28:30.98:31,0,152	1/1:19,0:17:2.28:108,2,0	0/0:6,0:6:2.04:0,2,6	0/1:33,0:30:0:0,0,0	1/1:10,0:9:2.99:23,3,0	1/1:8,0:7:2.60:24,3,0	1/1:38,0:37:28.97:187,29,0	1/1:24,0:24:19.72:125,20,0	0/1:23,0:22:36.98:151,0,37	1/1:18,0:18:0.30:156,0,0	1/1:6,0:6:14.86:103,15,0
chr10	99220614	.	CTG	C	3041	PASS	AB=0.885;AC=26;AF=0.500;AN=52;BaseQRankSum=-0.294;DP=543;FS=0.000;HRun=0;HaplotypeScore=123.2290;InbreedingCoeff=0.1267;MQ=45.63;MQ0=16;MQRankSum=0.416;QD=7.76;ReadPosRankSum=1.082;VQSLOD=3.2367;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:7.43:85,7,0	0/0:6,0:5:4.07:0,4,12	0/0:34,0:10:26.13:0,26,324	0/1:29,0:10:10.60:11,0,341	./.	0/0:19,1:19:5.02:0,5,29	0/0:26,0:24:5.96:0,6,44	1/1:3,15:14:36.08:400,36,0	0/1:17,0:17:1.19:32,0,1	0/1:13,0:13:45.45:219,0,45	1/1:3,3:6:3.01:41,3,0	1/1:20,12:30:22.52:435,23,0	0/1:18,0:16:8.12:8,0,107	0/1:13,9:21:6.50:204,0,7	1/1:11,9:19:14.37:204,14,0	0/0:16,0:16:42.14:0,42,735	0/1:18,0:17:14.53:35,0,15	0/0:28,0:28:4.72:0,5,144	0/1:8,11:17:72.96:282,0,73	0/0:6,0:6:2.04:0,2,6	0/1:33,0:31:0:0,0,0	0/1:10,0:9:0.09:0,0,0	./.	0/1:26,12:37:21.87:257,0,22	0/1:19,5:24:2.05:186,0,2	1/1:21,1:21:20.84:393,21,0	0/1:9,8:18:57.66:203,0,58	1/1:2,4:6:15.05:202,15,0
chr10	99220616	.	G	GTGTC	5248.49	PASS	AB=0.800;AC=28;AF=0.538;AN=52;BaseQRankSum=0.663;DP=578;FS=3.618;HRun=0;HaplotypeScore=137.6247;InbreedingCoeff=0.1528;MQ=46.32;MQ0=15;MQRankSum=-1.776;QD=12.86;ReadPosRankSum=0.884;VQSLOD=4.6747;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,11:33:12.74:143,13,0	0/1:3,3:5:0.13:0,0,0	0/0:34,0:10:25.25:0,25,340	0/0:32,0:13:0.67:0,1,411	./.	0/0:5,16:22:2.59:0,3,23	0/0:10,21:31:5.65:0,6,46	1/1:19,0:15:23:553,23,0	1/1:6,10:19:2.96:67,3,0	1/1:3,12:15:13:622,13,0	1/1:6,0:6:2.85:41,3,0	1/1:25,7:31:34.22:666,34,0	0/1:11,9:18:15.91:94,0,16	0/1:20,3:22:20.90:283,0,21	1/1:19,1:19:17.23:310,17,0	0/0:16,0:16:42.14:0,42,782	0/1:6,11:17:33.86:50,0,34	0/1:27,1:28:84.58:143,0,85	0/1:19,0:17:32.98:398,0,33	./.	0/1:13,21:38:0.01:0,0,0	0/0:5,4:9:3:0,3,25	0/0:3,3:6:0:0,0,0	0/1:32,7:38:1.90:332,0,2	0/1:20,4:24:33.83:281,0,34	1/1:7,16:22:32.23:722,32,0	0/1:15,2:17:13.27:261,0,13	1/1:6,0:6:15.05:282,15,0
chr10	99221480	.	CG	C	8307.06	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=1.718;DP=255;FS=4.514;HRun=5;HaplotypeScore=239.0668;InbreedingCoeff=0.5169;MQ=36.43;MQ0=0;MQRankSum=-1.732;QD=32.83;ReadPosRankSum=1.718;VQSLOD=1.5470;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:12.03:136,12,0	1/1:0,7:7:21.06:238,21,0	0/0:1,0:1:3:0,3,26	./.	1/1:0,11:11:30.09:339,30,0	1/1:0,8:7:21.06:238,21,0	1/1:0,6:6:18.05:204,18,0	1/1:0,7:7:21.06:238,21,0	1/1:0,15:15:45.13:510,45,0	1/1:0,16:16:48.14:544,48,0	1/1:0,8:8:21.06:238,21,0	1/1:0,25:25:75.21:849,75,0	1/1:1,12:13:39.11:442,39,0	1/1:0,16:16:48.14:543,48,0	1/1:0,10:10:30.09:340,30,0	1/1:0,6:6:18.05:204,18,0	1/1:0,9:9:27.08:306,27,0	1/1:0,2:2:6.02:68,6,0	1/1:0,4:4:12.03:136,12,0	1/1:0,11:11:33.09:374,33,0	1/1:0,2:2:5.95:52,6,0	1/1:0,13:13:36.10:406,36,0	1/1:0,12:12:33.09:373,33,0	1/1:0,2:2:6.02:68,6,0	1/1:0,12:12:36.10:408,36,0	1/1:0,12:12:33.09:374,33,0	1/1:0,15:15:42.12:476,42,0	1/1:0,6:6:18.05:204,18,0
chr10	99221494	.	G	GT	6674.68	PASS	AB=0.800;AC=53;AF=0.946;AN=56;BaseQRankSum=2.289;DP=347;FS=12.998;HRun=1;HaplotypeScore=284.5871;InbreedingCoeff=0.3788;MQ=44.51;MQ0=0;MQRankSum=-2.391;QD=19.35;ReadPosRankSum=1.694;VQSLOD=1.8909;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:23.69:155,24,0	1/1:0,11:11:32.75:235,33,0	0/1:3,1:4:16.98:36,0,17	0/0:2,0:2:2.92:0,3,17	1/1:0,16:16:38.03:230,38,0	1/1:2,9:10:26.70:180,27,0	1/1:2,9:11:29.73:218,30,0	1/1:0,11:11:33.02:299,33,0	1/1:1,15:16:44.58:309,45,0	1/1:0,19:19:56.07:460,56,0	1/1:1,11:12:32.08:192,32,0	1/1:1,28:29:83.28:582,83,0	1/1:2,12:14:37.31:254,37,0	1/1:0,18:18:52.53:332,53,0	1/1:0,14:14:38.67:271,39,0	1/1:0,8:8:23.75:162,24,0	1/1:0,13:13:32.73:230,33,0	1/1:2,2:4:6:51,6,0	1/1:1,9:10:29.40:263,29,0	1/1:0,15:15:44.49:303,44,0	1/1:0,3:3:8.93:64,9,0	1/1:1,15:16:41.37:283,41,0	1/1:0,22:22:58.57:350,59,0	1/1:0,4:4:5.90:37,6,0	1/1:0,16:16:47.44:315,47,0	1/1:0,12:12:32.98:281,33,0	1/1:0,19:19:53.07:389,53,0	1/1:0,8:8:23.93:194,24,0
chr10	99221497	.	AT	A	4558.85	PASS	AB=0.800;AC=54;AF=0.964;AN=56;BaseQRankSum=2.829;DP=366;FS=17.882;HRun=3;HaplotypeScore=298.7923;InbreedingCoeff=-0.0171;MQ=53.76;MQ0=0;MQRankSum=-1.181;QD=12.46;ReadPosRankSum=0.546;VQSLOD=1.2693;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:24.73:157,25,0	1/1:0,11:11:30.35:152,30,0	0/1:3,6:9:19.71:148,0,20	0/1:3,0:3:14.20:16,0,14	1/1:0,16:16:30.60:116,31,0	1/1:2,9:10:23.50:111,23,0	1/1:2,10:12:29.81:166,30,0	1/1:1,11:12:32.18:190,32,0	1/1:0,16:16:42.63:195,43,0	1/1:0,19:19:48.69:272,49,0	1/1:1,11:12:24.11:103,24,0	1/1:0,30:30:81.30:388,81,0	1/1:1,13:14:24.47:129,24,0	1/1:1,18:19:44.76:201,45,0	1/1:0,16:16:44.62:281,45,0	1/1:0,8:8:21.43:95,21,0	1/1:0,13:13:29.69:133,30,0	1/1:2,2:4:5.65:31,6,0	1/1:1,9:10:25.42:164,25,0	1/1:1,15:16:42.14:204,42,0	1/1:1,3:4:8.35:45,8,0	1/1:1,15:16:34.95:145,35,0	1/1:1,23:24:55.82:318,56,0	1/1:1,4:5:4.87:17,5,0	1/1:0,16:16:42.12:190,42,0	1/1:0,12:12:31.81:173,32,0	1/1:1,20:21:52.51:293,53,0	1/1:0,8:8:22.83:126,23,0
chr10	99223103	.	A	AG	2698.84	PASS	AC=44;AF=0.917;AN=48;BaseQRankSum=5.667;DP=167;FS=42.430;HRun=5;HaplotypeScore=33.3150;InbreedingCoeff=0.4672;MQ=31.51;MQ0=9;MQRankSum=-7.123;QD=23.88;ReadPosRankSum=-1.661;VQSLOD=0.4785;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,3:4:6.02:82,6,0	1/1:0,3:3:9.03:123,9,0	./.	./.	1/1:4,5:9:9.03:116,9,0	1/1:0,6:6:15.05:205,15,0	1/1:0,3:3:9.03:123,9,0	1/1:4,9:9:24.08:328,24,0	1/1:1,1:1:3.01:41,3,0	1/1:0,5:5:12.04:164,12,0	1/1:1,3:4:3.01:41,3,0	1/1:1,1:2:3.01:41,3,0	1/1:2,2:4:5.98:61,6,0	1/1:2,4:6:15.05:204,15,0	1/1:0,2:2:6.02:82,6,0	0/0:14,0:13:36.10:0,36,407	1/1:0,1:1:3.01:41,3,0	0/0:17,0:16:35.57:0,36,402	1/1:2,6:7:18.06:243,18,0	1/1:1,8:9:21.07:281,21,0	./.	1/1:0,5:5:9.03:123,9,0	1/1:1,5:6:6.02:82,6,0	./.	1/1:4,3:7:9.03:123,9,0	1/1:0,3:2:6.02:82,6,0	1/1:2,3:5:12.04:159,12,0	1/1:4,2:6:6.02:82,6,0
chr10	99223177	.	TA	T	3797.66	PASS	AB=0.615;AC=45;AF=0.804;AN=56;BaseQRankSum=2.110;DP=305;FS=34.354;HRun=11;HaplotypeScore=50.3452;InbreedingCoeff=0.7792;MQ=54.91;MQ0=6;MQRankSum=-1.062;QD=16.16;ReadPosRankSum=1.333;VQSLOD=2.0463;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:54.60:0,55,593	1/1:0,1:1:3:25,3,0	0/0:6,0:5:12.02:0,12,121	0/0:10,0:4:8.81:0,9,74	1/1:2,13:15:29.96:246,30,0	1/1:2,9:11:26.96:221,27,0	1/1:1,2:3:2.99:25,3,0	1/1:5,0:18:28.51:82,29,0	1/1:0,9:9:26.97:221,27,0	1/1:7,5:12:14.96:123,15,0	1/1:2,10:12:23.96:197,24,0	1/1:1,9:10:20.96:172,21,0	1/1:1,8:9:17.97:147,18,0	1/1:0,10:10:29.96:246,30,0	1/1:1,5:6:14.98:123,15,0	0/0:11,0:11:24.06:0,24,256	1/1:0,12:12:32.96:271,33,0	0/0:4,0:21:43.08:0,43,250	0/1:3,5:8:11.13:118,0,11	1/1:4,8:12:26.94:221,27,0	1/1:0,6:7:17.02:129,17,0	1/1:0,5:6:17.02:129,17,0	1/1:0,14:14:35.95:295,36,0	1/1:0,3:3:8.99:74,9,0	1/1:2,15:17:47.79:383,48,0	1/1:2,1:19:35.59:119,36,0	1/1:1,7:9:20.97:172,21,0	1/1:0,0:10:20.37:59,20,0
chr10	99224459	.	T	TAAGA	9896.69	PASS	AB=0.828;AC=34;AF=0.607;AN=56;BaseQRankSum=5.251;DP=522;FS=10.932;HRun=0;HaplotypeScore=135.5817;InbreedingCoeff=0.3923;MQ=71.05;MQ0=2;MQRankSum=-9.037;QD=26.11;ReadPosRankSum=-0.590;VQSLOD=4.2042;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:64.89:0,65,1108	0/1:5,4:9:21.94:117,0,22	0/0:22,0:17:37.24:0,37,737	0/0:15,0:15:44.87:0,45,601	1/1:8,10:18:40.37:774,40,0	1/1:17,8:25:16.33:900,16,0	0/1:16,1:17:12.81:309,0,13	0/0:28,0:28:68.76:0,69,1124	0/1:12,4:16:11.99:366,0,12	1/1:3,11:18:20.61:593,21,0	1/1:18,9:27:34.60:775,35,0	1/1:6,9:15:10.42:342,10,0	1/1:14,6:20:22.24:493,22,0	1/1:9,5:14:28.25:541,28,0	1/1:10,12:22:10.61:881,11,0	0/0:14,0:14:39.13:0,39,774	1/1:10,2:12:1.68:151,2,0	0/0:27,0:27:56:0,56,848	1/1:16,4:19:12.07:299,12,0	0/1:23,8:31:10.50:982,0,10	0/0:14,0:14:21.92:0,22,220	1/1:8,13:21:40.10:770,40,0	0/1:11,3:14:22.85:272,0,23	0/1:3,9:13:0.37:63,0,0	1/1:6,13:19:33.92:783,34,0	0/1:14,0:14:24.54:25,0,399	1/1:9,15:27:7.68:378,8,0	0/1:7,0:7:78.71:81,0,79
chr10	99224460	.	CAGAAAGAAAGAA	C	333.53	PASS	AB=0.692;AC=1;AF=0.019;AN=54;BaseQRankSum=-1.323;DP=558;FS=0.000;HRun=0;HaplotypeScore=263.0466;InbreedingCoeff=-0.0308;MQ=67.12;MQ0=2;MQRankSum=-2.160;QD=12.35;ReadPosRankSum=1.452;VQSLOD=1.9150;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:53.21:0,53,2290	0/0:9,0:9:9.03:0,9,399	0/0:21,0:16:3.01:0,3,41	./.	0/0:22,0:22:54.16:0,54,2084	0/0:26,0:26:60.21:0,60,2290	0/0:17,0:17:30.10:0,30,903	0/0:35,0:35:39.13:0,39,1284	0/0:17,0:17:30.10:0,30,1194	0/0:16,0:16:33.11:0,33,1628	0/0:29,0:29:51.18:0,51,2100	0/0:17,0:17:30.10:0,30,1436	0/0:22,0:22:39.13:0,39,1802	0/0:15,0:15:33.10:0,33,1296	0/0:26,0:26:63.22:0,63,3042	0/0:16,0:16:36.12:0,36,2045	0/0:13,0:13:15.05:0,15,650	0/1:15,12:27:99:408,0,103	0/0:21,0:20:27.09:0,27,1217	0/0:35,0:35:72.25:0,72,3018	0/0:14,0:14:24.07:0,24,1256	0/0:23,0:23:51.18:0,51,2204	0/0:17,0:17:24.08:0,24,1014	0/0:13,0:13:9.03:0,9,376	0/0:23,0:23:54.19:0,54,2526	0/0:15,0:15:30.10:0,30,1110	0/0:24,0:24:30.09:0,30,1064	0/0:8,0:8:18.06:0,18,953
chr10	99225614	.	T	TC	21639.04	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=13.662;DP=736;FS=1.729;HRun=4;HaplotypeScore=157.3370;InbreedingCoeff=0.9989;MQ=89.78;MQ0=0;MQRankSum=-8.718;QD=34.85;ReadPosRankSum=5.303;VQSLOD=2.7607;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,26:32:72.19:953,72,0	1/1:0,11:11:24.08:336,24,0	0/0:33,0:33:90.24:0,90,1052	0/0:31,0:32:86.89:0,87,993	1/1:1,24:25:63.21:875,63,0	1/1:0,32:32:81.27:1133,81,0	1/1:1,11:12:27.09:378,27,0	1/1:2,34:36:99:1379,102,0	1/1:0,22:22:60.20:839,60,0	1/1:3,23:27:72.21:960,72,0	1/1:1,25:26:62.57:846,63,0	1/1:0,28:28:81.27:1131,81,0	1/1:4,18:22:51.17:714,51,0	1/1:1,16:17:45.15:630,45,0	1/1:0,22:22:60.20:840,60,0	0/0:23,0:23:66.19:0,66,781	1/1:3,22:25:57.16:776,57,0	0/0:27,0:27:78.18:0,78,907	1/1:0,20:20:60.17:803,60,0	1/1:4,43:47:99:1635,117,0	1/1:2,33:35:90.30:1257,90,0	1/1:0,34:34:93.18:1301,93,0	1/1:2,17:19:33.11:461,33,0	1/1:1,39:40:90.30:1257,90,0	1/1:0,25:25:60.20:839,60,0	1/1:1,25:26:66.22:913,66,0	1/1:1,27:28:69.23:964,69,0	1/1:0,10:10:30.10:420,30,0
chr10	99225879	.	A	AG	9194.01	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=12.544;DP=727;FS=1.770;HRun=4;HaplotypeScore=190.1244;InbreedingCoeff=0.9995;MQ=85.10;MQ0=0;MQRankSum=-6.716;QD=14.66;ReadPosRankSum=3.786;VQSLOD=3.6364;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:45.13:220,45,0	1/1:12,0:11:25.04:152,25,0	0/0:29,0:29:80.45:0,80,988	0/0:19,0:19:57.16:0,57,719	1/1:34,0:34:75.54:401,76,0	1/1:35,0:35:80.42:394,80,0	1/1:22,0:22:52.51:344,53,0	1/1:28,0:28:69.51:551,70,0	1/1:26,1:27:72.76:380,73,0	1/1:30,0:31:79.26:502,79,0	1/1:30,1:31:74.22:429,74,0	1/1:17,1:18:51.68:291,52,0	1/1:28,2:30:81.58:458,82,0	1/1:25,0:25:69.27:377,69,0	1/1:25,2:27:69.90:431,70,0	0/0:28,0:28:68.84:0,69,1001	1/1:25,1:26:63.01:315,63,0	0/0:24,0:24:72.22:0,72,914	1/1:17,1:18:47.71:353,48,0	1/1:38,0:37:99:587,100,0	1/1:22,0:22:63.19:339,63,0	1/1:37,0:37:74.61:546,75,0	1/1:21,0:21:51.62:283,52,0	1/1:18,1:19:48.78:293,49,0	1/1:25,2:27:53.66:306,54,0	1/1:29,0:29:70.56:536,71,0	1/1:37,0:36:85.96:538,86,0	1/1:13,0:13:35.56:171,36,0
chr10	99227465	.	A	AT	25924.06	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-11.084;DP=773;FS=1.932;HRun=1;HaplotypeScore=71.3312;InbreedingCoeff=0.9974;MQ=71.67;MQ0=0;MQRankSum=-1.031;QD=38.24;ReadPosRankSum=4.909;VQSLOD=5.3509;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,46:52:99:1791,109,0	1/1:0,11:11:27.09:404,27,0	0/0:25,0:22:63.11:0,63,729	0/0:18,0:16:38.97:0,39,398	1/1:1,35:36:96.10:1327,96,0	1/1:3,23:26:60.20:899,60,0	1/1:0,28:28:72.24:1073,72,0	1/1:3,38:41:99:1615,114,0	1/1:1,28:29:75.25:1123,75,0	1/1:0,37:37:99:1621,111,0	1/1:2,31:33:84.15:1193,84,0	1/1:0,21:21:45.15:674,45,0	1/1:0,22:22:63.21:943,63,0	1/1:0,25:25:75.25:1123,75,0	1/1:0,23:23:63.21:943,63,0	0/0:34,0:34:99:0,99,1284	1/1:1,31:32:84.28:1246,84,0	0/0:18,0:18:51.11:0,51,621	1/1:0,23:23:69.18:965,69,0	1/1:2,29:31:90.04:1226,90,0	1/1:1,26:27:57.19:854,57,0	1/1:3,15:18:45.15:674,45,0	1/1:1,26:27:63.21:944,63,0	1/1:2,27:29:66.22:982,66,0	1/1:0,24:24:72.24:1077,72,0	1/1:0,33:33:99:1440,99,0	1/1:2,40:42:99:1517,102,0	1/1:0,8:8:18.06:269,18,0
chr10	99230874	.	G	GGT	24066.96	PASS	AB=0.600;AC=44;AF=0.786;AN=56;BaseQRankSum=-12.858;DP=806;FS=3.022;HRun=0;HaplotypeScore=90.5069;InbreedingCoeff=0.6207;MQ=71.99;MQ0=2;MQRankSum=-7.162;QD=34.73;ReadPosRankSum=4.728;VQSLOD=7.1829;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,41:50:99:1957,120,0	0/1:3,10:13:4.07:459,0,4	0/0:29,0:29:56.84:0,57,669	0/0:32,0:32:24.84:0,25,713	1/1:7,22:31:57.19:924,57,0	0/1:6,13:20:62.81:589,0,63	1/1:4,17:23:47.99:786,48,0	1/1:11,21:33:66.18:1056,66,0	1/1:9,26:35:72.72:1181,73,0	1/1:6,24:30:69.22:1108,69,0	1/1:3,11:14:33.11:541,33,0	0/1:10,25:36:58.76:1138,0,59	1/1:5,35:39:90.31:1474,90,0	1/1:5,23:28:66.23:1081,66,0	1/1:9,33:42:96.33:1575,96,0	0/0:27,0:27:69.22:0,69,855	1/1:7,29:36:78.27:1279,78,0	0/0:23,0:23:51.16:0,51,632	0/1:9,9:18:4.10:455,0,4	1/1:5,22:28:23:897,23,0	1/1:5,39:45:96.32:1552,96,0	1/1:8,28:36:47.08:1290,47,0	1/1:5,17:22:45.15:738,45,0	1/1:5,18:22:23:895,23,0	1/1:3,14:18:42.14:689,42,0	1/1:12,22:36:66.23:1075,66,0	1/1:7,17:24:54.18:885,54,0	1/1:1,10:11:27.09:443,27,0
chr10	99231884	.	CTG	C	4614.49	PASS	AB=0.872;AC=42;AF=0.778;AN=54;BaseQRankSum=4.657;DP=816;FS=11.940;HRun=0;HaplotypeScore=185.4185;InbreedingCoeff=0.1802;MQ=64.11;MQ0=19;MQRankSum=0.387;QD=6.91;ReadPosRankSum=0.045;VQSLOD=3.6205;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,11:39:2.47:135,0,2	0/1:9,1:10:11.52:76,0,12	./.	0/0:72,0:30:0:0,0,0	1/1:20,5:27:29.46:259,29,0	1/1:14,5:20:23.88:235,24,0	1/1:21,14:35:17.91:197,18,0	0/1:33,0:33:2.05:3,0,2	1/1:22,16:40:45.23:587,45,0	1/1:20,3:34:16.31:240,16,0	1/1:12,4:16:17.68:164,18,0	1/1:22,4:27:20.97:197,21,0	1/1:19,5:27:41.31:358,41,0	1/1:17,2:21:14.60:103,15,0	1/1:16,7:32:46.95:404,47,0	0/1:31,0:32:12.74:13,0,642	1/1:20,6:27:11.35:285,11,0	0/0:16,0:22:15.82:0,16,118	0/1:13,0:13:0:0,0,0	0/1:18,8:27:8.63:98,0,9	1/1:37,10:46:21.46:383,21,0	1/1:11,2:17:5.85:47,6,0	0/1:15,2:18:23.96:24,0,38	0/1:20,13:34:43.71:84,0,44	1/1:17,3:21:25.85:241,26,0	1/1:17,0:27:17.21:103,17,0	1/1:20,8:29:35.87:364,36,0	1/1:11,0:12:2.79:14,3,0
chr10	99232137	.	T	TTGTGTG	7708.01	PASS	AB=0.905;AC=48;AF=0.923;AN=52;BaseQRankSum=-1.529;DP=665;FS=1.266;HRun=0;HaplotypeScore=200.9515;InbreedingCoeff=0.3979;MQ=63.62;MQ0=10;MQRankSum=0.871;QD=13.34;ReadPosRankSum=0.307;VQSLOD=4.2963;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:37:12.04:260,12,0	1/1:15,0:16:12.04:259,12,0	./.	./.	1/1:23,0:23:6.02:161,6,0	1/1:24,0:24:28.49:635,28,0	1/1:20,0:19:13.24:282,13,0	1/1:24,0:24:5.98:98,6,0	1/1:22,8:29:21.07:450,21,0	1/1:40,0:40:46.59:799,47,0	1/1:18,0:18:18.04:354,18,0	1/1:20,0:20:9.03:201,9,0	1/1:20,0:20:18.95:393,19,0	1/1:22,0:23:12.04:253,12,0	1/1:27,0:24:12.02:232,12,0	0/1:13,0:17:53.80:73,0,54	1/1:22,0:22:24.17:478,24,0	0/0:18,0:20:20.80:0,21,247	1/1:15,0:15:6:68,6,0	1/1:16,0:15:3.01:68,3,0	0/1:30,0:28:0:0,0,0	1/1:21,0:21:15.05:328,15,0	1/1:21,0:22:14.88:308,15,0	1/1:16,0:19:14.08:263,14,0	1/1:16,0:15:18.06:395,18,0	1/1:36,0:34:40:765,40,0	1/1:24,0:24:24.08:453,24,0	1/1:13,0:14:5.80:132,6,0
chr10	99232179	.	AGG	A	5648.95	PASS	AB=0.621;AC=41;AF=0.732;AN=56;BaseQRankSum=-4.756;DP=485;FS=1.942;HRun=9;HaplotypeScore=110.9062;InbreedingCoeff=0.5607;MQ=55.06;MQ0=12;MQRankSum=0.625;QD=13.95;ReadPosRankSum=2.899;VQSLOD=2.7191;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,24:29:28.96:331,29,0	0/0:4,7:11:2.68:0,3,11	0/0:20,0:13:7.82:0,8,250	0/0:19,0:12:32.65:0,33,339	0/1:3,13:16:3.06:62,0,3	1/1:15,4:19:38.95:395,39,0	1/1:5,11:16:14.07:158,14,0	1/1:2,17:18:48.11:544,48,0	1/1:16,3:18:14.86:229,15,0	1/1:6,14:20:42.10:478,42,0	1/1:16,6:22:33.49:355,33,0	1/1:13,2:15:25.98:280,26,0	0/1:5,4:9:7.77:27,0,8	0/1:3,9:12:0.44:89,0,0	1/1:11,7:15:26.92:294,27,0	0/0:13,0:14:35.35:0,35,488	0/1:9,11:18:2.01:137,0,2	0/0:3,0:15:31.76:0,32,111	1/1:8,5:13:27.08:313,27,0	1/1:4,13:17:5.82:70,6,0	1/1:6,14:18:12.04:140,12,0	1/1:8,7:15:4.78:40,5,0	1/1:13,6:18:20.97:229,21,0	0/1:8,10:17:1.64:88,0,2	1/1:14,4:17:22.81:250,23,0	1/1:19,6:25:57.03:618,57,0	1/1:1,19:20:31.42:422,31,0	1/1:1,4:5:7.69:102,8,0
chr10	99232181	.	G	GTA	913.58	PASS	AB=0.960;AC=21;AF=0.375;AN=56;BaseQRankSum=5.905;DP=481;FS=0.525;HRun=0;HaplotypeScore=130.2782;InbreedingCoeff=-0.4311;MQ=58.53;MQ0=12;MQRankSum=-0.309;QD=2.64;ReadPosRankSum=-0.602;VQSLOD=2.4323;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,1:28:24.71:71,0,25	0/0:11,0:11:0.23:0,0,1	0/0:23,0:15:32:0,32,435	0/0:20,0:13:31.12:0,31,478	0/0:15,0:15:0.27:0,0,14	0/1:16,0:19:50.28:174,0,50	0/1:13,0:15:8.23:89,0,8	0/1:19,0:18:45.48:45,0,126	0/1:18,0:17:23.53:24,0,35	0/1:20,0:20:58.93:59,0,85	0/1:18,1:19:41.83:42,0,67	0/1:14,0:15:24.86:25,0,67	0/1:8,0:8:8.59:11,0,9	0/1:13,0:13:15.17:15,0,15	0/1:16,0:14:41.28:76,0,41	0/0:14,0:14:35.50:0,35,456	0/1:18,1:18:7.32:67,0,7	0/0:16,0:16:47.40:0,47,410	0/1:13,0:13:9.43:9,0,83	0/1:18,0:18:3.81:28,0,4	0/0:20,1:19:7.35:0,7,32	0/0:15,0:15:3.24:0,3,14	0/1:18,0:17:10.84:72,0,11	0/1:17,0:17:7.05:82,0,7	0/1:17,1:17:27.06:27,0,35	0/1:22,0:24:70.21:70,0,105	0/1:20,0:19:15.25:15,0,33	1/1:5,0:5:2.14:59,2,0
chr10	99232396	.	TGCATTGA	T	897.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.288;DP=765;FS=9.709;HRun=0;HaplotypeScore=169.5310;InbreedingCoeff=0.9989;MQ=84.37;MQ0=0;MQRankSum=-4.447;QD=39.04;ReadPosRankSum=0.937;VQSLOD=2.8176;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:42.14:993,42,0	0/0:12,0:12:33.11:0,33,1268	0/0:21,0:21:48.16:0,48,1806	0/0:34,0:34:58.02:0,58,2930	0/0:39,0:39:99:0,105,3783	0/0:27,0:27:72.25:0,72,2737	0/0:17,0:17:42.14:0,42,1612	0/0:34,0:33:63.22:0,63,2409	0/0:34,0:34:93.32:0,93,3438	0/0:42,0:42:99:0,117,4489	0/0:30,0:30:72.25:0,72,2642	0/0:29,0:29:81.28:0,81,3110	0/0:32,0:32:84.29:0,84,2961	0/0:35,0:35:99:0,105,3888	0/0:29,0:29:78.27:0,78,2908	0/0:29,0:29:72.25:0,72,2764	0/0:15,0:15:45.15:0,45,1677	0/0:21,0:21:57.20:0,57,2138	0/0:18,0:18:33.09:0,33,1179	0/0:32,0:32:93.32:0,93,3564	0/0:35,0:35:90.27:0,90,3229	0/0:26,0:26:69.24:0,69,2554	0/0:33,0:33:87.30:0,87,3334	0/0:24,0:24:63.15:0,63,2352	0/0:24,0:24:66.23:0,66,2476	0/0:25,0:25:63.22:0,63,2308	0/0:35,0:35:99:0,99,3261	0/0:10,0:10:30.10:0,30,1095
chr10	99232508	.	TCATCCATC	T	301.90	PASS	AB=1.000;AC=3;AF=0.058;AN=52;BaseQRankSum=0.680;DP=820;FS=1.038;HRun=0;HaplotypeScore=287.5968;InbreedingCoeff=0.4877;MQ=46.73;MQ0=24;MQRankSum=-3.535;QD=5.92;ReadPosRankSum=-0.791;VQSLOD=2.1918;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:24.94:0,25,192	0/0:10,0:10:16.65:0,17,104	./.	./.	0/0:17,0:17:17.43:0,17,188	0/0:21,0:21:28.93:0,29,235	0/0:31,0:31:14.31:0,14,87	0/0:41,0:32:20.85:0,21,161	0/0:31,0:31:41.88:0,42,212	0/0:35,0:35:23.17:0,23,317	0/0:21,0:20:27.60:0,28,229	0/0:30,0:29:25.69:0,26,156	0/0:49,0:49:41.74:0,42,240	0/0:42,0:40:33.07:0,33,177	0/0:37,0:37:44.35:0,44,282	0/0:29,0:29:42.13:0,42,1511	0/0:18,0:17:11.60:0,12,69	1/1:10,4:14:18.02:366,18,0	0/0:23,0:21:10.31:0,10,76	0/0:24,0:23:12:0,12,55	0/0:44,0:43:3.68:0,4,26	0/0:29,0:28:14.47:0,14,72	0/0:23,0:23:20.50:0,21,134	0/0:13,0:13:17.37:0,17,121	0/0:30,0:30:32.53:0,33,253	0/1:37,0:36:38.29:38,0,255	0/0:37,0:36:52.34:0,52,280	0/0:10,0:10:9.40:0,9,177
chr10	99232557	.	CATCCTTCT	C	15237.26	PASS	AB=0.865;AC=44;AF=0.786;AN=56;BaseQRankSum=15.004;DP=561;FS=10.362;HRun=0;HaplotypeScore=245.5913;InbreedingCoeff=0.5015;MQ=42.09;MQ0=17;MQRankSum=-10.455;QD=35.77;ReadPosRankSum=3.628;VQSLOD=2.7885;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:16:99:102,0,537	1/1:7,6:13:27.55:522,28,0	0/0:47,0:22:59.19:0,59,1356	0/0:34,0:21:57.58:0,58,1623	1/1:4,4:8:5.44:61,5,0	1/1:5,5:10:27.09:578,27,0	1/1:4,11:15:21.06:378,21,0	0/1:25,2:17:99:191,0,424	1/1:13,12:25:60.21:1234,60,0	1/1:7,14:19:57.18:1287,57,0	1/1:9,4:13:27.14:378,27,0	1/1:11,8:19:48.16:936,48,0	1/1:14,13:27:66.23:1316,66,0	1/1:11,19:30:72.24:1470,72,0	1/1:17,8:25:57.20:1209,57,0	0/0:33,0:33:96.32:0,96,3462	1/1:3,1:4:6.02:134,6,0	0/0:21,0:21:52.21:0,52,1100	1/1:7,3:6:5.97:94,6,0	1/1:6,4:9:27.09:500,27,0	1/1:11,10:18:9.01:110,9,0	1/1:5,10:15:39.13:739,39,0	1/1:5,5:10:18.06:341,18,0	1/1:8,3:11:6:116,6,0	1/1:8,8:16:48.15:901,48,0	0/1:26,18:42:99:1042,0,1024	1/1:14,12:26:74.84:1460,75,0	0/1:7,2:9:99:140,0,395
chr10	99232561	.	CTTCT	C	10480.27	PASS	AB=0.989;AC=44;AF=0.786;AN=56;BaseQRankSum=15.546;DP=546;FS=9.163;HRun=0;HaplotypeScore=227.5662;InbreedingCoeff=0.5022;MQ=44.10;MQ0=11;MQRankSum=-10.976;QD=25.75;ReadPosRankSum=3.162;VQSLOD=3.2097;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:26.44:26,0,484	1/1:6,6:12:30.08:386,30,0	0/0:49,0:24:61.58:0,62,1276	0/0:37,0:24:70.45:0,70,1514	1/1:6,2:8:5.58:79,6,0	1/1:5,5:10:27.08:419,27,0	1/1:12,2:15:20.55:269,21,0	0/1:23,0:16:57.74:58,0,510	1/1:12,13:25:60.18:924,60,0	1/1:15,5:19:57.16:804,57,0	1/1:4,7:11:19.76:268,20,0	1/1:9,10:19:48.13:765,48,0	1/1:13,14:27:66.12:982,66,0	1/1:19,11:30:71.89:1016,72,0	1/1:8,17:25:57.18:836,57,0	0/0:32,0:32:94.87:0,95,2638	1/1:3,1:4:6.02:100,6,0	0/0:21,0:21:52.73:0,53,1154	1/1:5,0:3:6.02:70,6,0	1/1:5,5:9:26.87:391,27,0	1/1:14,4:17:9.33:93,9,0	1/1:10,5:15:38.77:462,39,0	1/1:6,4:10:18.05:244,18,0	1/1:5,3:9:6.02:94,6,0	1/1:8,8:16:48.07:555,48,0	0/1:42,2:43:99:442,0,1056	1/1:14,12:26:74.87:1151,75,0	0/1:9,0:9:45.32:45,0,357
chr10	99232564	.	C	CACA	8411.93	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=14.968;DP=553;FS=13.888;HRun=0;HaplotypeScore=232.4067;InbreedingCoeff=0.3682;MQ=45.98;MQ0=10;MQRankSum=-11.138;QD=20.42;ReadPosRankSum=3.540;VQSLOD=3.1238;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:20.32:20,0,628	1/1:12,0:12:0.17:307,0,0	0/0:49,0:27:65.79:0,66,1079	0/0:37,0:26:77.23:0,77,1229	0/1:8,0:8:37.21:62,0,37	1/1:10,0:10:27.07:310,27,0	1/1:14,1:15:20.92:208,21,0	0/1:27,0:20:68.31:68,0,674	1/1:25,0:25:60.02:613,60,0	1/1:19,0:19:56.42:658,56,0	1/1:11,0:11:16.58:358,17,0	1/1:18,1:19:46.79:458,47,0	1/1:27,0:27:66.05:763,66,0	1/1:30,0:30:71.49:770,71,0	1/1:25,0:25:57.12:587,57,0	0/0:32,0:32:96.33:0,96,1790	1/1:3,0:4:6.02:75,6,0	0/0:23,0:23:51.65:0,52,949	0/1:6,0:4:1.14:24,0,1	1/1:10,0:9:27.07:405,27,0	1/1:17,1:17:0.87:37,1,0	1/1:15,0:15:39.03:622,39,0	1/1:9,0:9:18:212,18,0	1/1:7,1:10:5.89:62,6,0	1/1:16,0:16:46.91:586,47,0	0/1:45,0:44:99:270,0,1079	1/1:25,0:26:74.90:918,75,0	0/1:9,0:9:18.32:18,0,315
chr10	99232624	.	CCATGCATCCATGCATCCATG	C	11125.43	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=2.914;DP=736;FS=0.802;HRun=0;HaplotypeScore=391.4241;InbreedingCoeff=0.2739;MQ=37.63;MQ0=61;MQRankSum=-2.760;QD=17.22;ReadPosRankSum=3.685;VQSLOD=2.2592;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:49,0:47:36.95:37,0,999	1/1:11,0:11:23.08:283,23,0	0/0:21,0:5:2.12:0,2,34	0/0:23,0:5:2.97:0,3,20	1/1:13,0:12:6.01:81,6,0	1/1:34,0:33:68.58:967,69,0	1/1:30,0:27:44.46:518,44,0	0/0:34,0:22:49.04:0,49,442	1/1:28,0:28:23.95:999,24,0	1/1:22,0:20:28.23:605,28,0	1/1:12,0:11:5.90:52,6,0	1/1:32,0:31:20.65:972,21,0	1/1:44,0:44:78.15:1201,78,0	1/1:43,0:39:83.73:1031,84,0	1/1:34,0:33:44.72:837,45,0	0/1:40,0:39:11.75:12,0,2265	0/1:17,0:17:29.92:245,0,30	0/1:22,0:21:16.34:849,0,16	1/1:5,10:12:27.14:417,27,0	1/1:13,0:12:3.40:36,3,0	1/1:36,0:26:17.51:226,18,0	1/1:24,0:22:3.99:278,4,0	1/1:17,0:17:15.42:175,15,0	1/1:15,0:15:8.04:63,8,0	1/1:13,0:13:8.07:304,8,0	0/1:53,0:45:99:170,0,734	1/1:29,0:28:46.38:768,46,0	0/0:12,0:10:2.05:0,2,373
chr10	99232644	.	GCATC	G	660.54	PASS	AB=0.971;AC=17;AF=0.340;AN=50;BaseQRankSum=1.081;DP=692;FS=7.769;HRun=0;HaplotypeScore=246.0181;InbreedingCoeff=-0.0999;MQ=35.78;MQ0=74;MQRankSum=-0.130;QD=1.47;ReadPosRankSum=-0.925;VQSLOD=1.4463;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,2:40:99:199,0,148	0/0:7,0:7:2.96:0,3,19	./.	./.	0/1:12,0:11:0:1,0,0	0/1:35,0:31:22.93:23,0,39	0/0:20,0:16:5.58:0,6,27	0/0:35,0:13:16.78:0,17,94	0/0:23,0:23:11.19:0,11,56	0/0:25,0:20:10.85:0,11,57	0/0:10,0:9:0.33:0,0,1	0/1:34,0:33:22.33:22,0,26	0/1:36,0:36:48.44:83,0,48	0/1:41,0:36:37.55:38,0,46	0/1:34,0:33:13.14:24,0,13	0/1:21,21:41:46.68:313,0,47	0/1:17,0:17:8.34:8,0,13	0/0:23,0:22:23.87:0,24,342	0/1:26,0:16:1.28:1,0,5	0/0:16,0:15:0.62:0,1,2	0/1:29,0:19:5.24:19,0,5	0/0:24,0:22:3.85:0,4,14	0/0:22,0:21:2.78:0,3,17	1/1:14,0:14:2.90:16,3,0	./.	0/1:48,0:40:1.77:2,0,179	0/1:23,0:22:1.49:22,0,1	1/1:15,0:13:5.53:21,6,0
chr10	99232688	.	CCTTCTATCCATCCATG	C	11266.81	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=4.327;DP=692;FS=9.044;HRun=0;HaplotypeScore=251.2891;InbreedingCoeff=0.7278;MQ=47.15;MQ0=37;MQRankSum=-6.633;QD=21.42;ReadPosRankSum=-0.343;VQSLOD=2.2903;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:37.57:0,38,2117	1/1:7,0:7:8.86:95,9,0	0/0:30,0:15:44.74:0,45,1054	0/0:44,0:15:44.75:0,45,960	1/1:20,0:20:19.41:393,19,0	1/1:23,0:20:47.88:922,48,0	1/1:20,0:18:27.67:513,28,0	1/1:32,0:26:70.44:487,70,0	1/1:29,0:28:56.57:946,57,0	1/1:24,0:23:63.27:1455,63,0	1/1:9,0:9:11.93:272,12,0	1/1:28,0:27:17.40:157,17,0	1/1:40,0:40:24.19:211,24,0	1/1:32,0:29:64.82:1050,65,0	1/1:33,0:33:71.53:1226,72,0	0/0:33,0:32:16.45:0,16,1237	1/1:16,0:16:32.19:476,32,0	0/0:24,0:23:63.18:0,63,1816	1/1:14,0:10:26.72:428,27,0	1/1:19,0:19:33.91:718,34,0	1/1:28,0:23:27.93:438,28,0	1/1:25,0:25:48.55:773,49,0	1/1:3,20:23:6.16:65,6,0	1/1:22,0:23:1.92:49,2,0	1/1:19,0:19:3.01:38,3,0	0/1:27,0:22:99:370,0,104	1/1:24,0:23:8.53:78,9,0	1/1:11,0:10:2.12:106,2,0
chr10	99232689	.	CTTCT	C	9173.25	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=6.222;DP=665;FS=13.857;HRun=0;HaplotypeScore=164.1506;InbreedingCoeff=0.6972;MQ=49.01;MQ0=36;MQRankSum=-6.581;QD=18.49;ReadPosRankSum=0.973;VQSLOD=3.7925;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:13.23:0,13,962	1/1:0,7:7:5.93:56,6,0	0/0:31,0:16:46.96:0,47,713	0/0:46,0:17:39.06:0,39,830	1/1:17,1:18:14.96:220,15,0	1/1:15,5:17:41.94:584,42,0	1/1:20,0:18:24.81:267,25,0	1/1:4,27:26:77.02:1008,77,0	1/1:27,1:27:54.05:626,54,0	1/1:21,0:21:60.12:898,60,0	1/1:8,1:9:8.81:136,9,0	1/1:1,26:26:15.01:192,15,0	1/1:0,37:37:23.97:379,24,0	1/1:24,6:27:62.09:714,62,0	1/1:25,3:28:61.90:794,62,0	0/0:33,0:32:2.80:0,3,536	1/1:14,1:15:31.01:404,31,0	0/0:24,0:23:41.53:0,42,1106	1/1:14,0:10:26.95:310,27,0	1/1:17,1:18:33.46:462,33,0	1/1:25,0:21:21.57:260,22,0	1/1:20,3:23:39.51:553,40,0	1/1:20,2:22:3.68:22,4,0	1/1:1,22:23:3.01:52,3,0	1/1:0,18:18:3.01:38,3,0	0/1:27,0:22:85.42:681,0,85	1/1:0,23:22:8.85:140,9,0	1/1:12,0:11:24.08:376,24,0
chr10	99233185	.	CT	C	16509.06	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=14.234;DP=716;FS=0.672;HRun=4;HaplotypeScore=194.4438;InbreedingCoeff=0.9947;MQ=88.52;MQ0=0;MQRankSum=-5.783;QD=31.63;ReadPosRankSum=6.521;VQSLOD=2.6917;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1583	1/1:1,10:11:27.08:324,27,0	0/0:31,0:31:86.49:0,86,1187	0/0:24,0:24:69.12:0,69,909	1/1:1,24:25:66.20:791,66,0	1/1:0,19:19:51.16:611,51,0	1/1:4,37:41:99:1259,105,0	0/0:27,0:27:75.24:0,75,1035	1/1:1,29:30:78.24:935,78,0	1/1:2,22:24:66.14:745,66,0	1/1:1,12:13:36.11:431,36,0	1/1:2,29:31:87.27:1042,87,0	1/1:0,24:24:69.21:827,69,0	1/1:1,36:37:93.28:1114,93,0	1/1:2,20:22:51.15:611,51,0	0/0:19,0:19:54.15:0,54,721	1/1:0,36:36:93.27:1115,93,0	0/0:22,0:22:66.20:0,66,902	1/1:3,18:21:54.14:628,54,0	1/1:1,15:16:45.14:539,45,0	1/1:0,49:49:99:1583,132,0	1/1:1,16:17:45.14:539,45,0	1/1:1,18:19:48.15:575,48,0	1/1:2,37:39:99:1295,108,0	1/1:1,23:24:66.20:791,66,0	0/0:16,1:17:13.49:0,13,581	1/1:2,22:24:63.19:754,63,0	0/0:15,0:15:18.06:0,18,251
chr10	99233559	.	AAGGAAG	A	5182.18	PASS	AB=0.521;AC=9;AF=0.161;AN=56;BaseQRankSum=13.352;DP=695;FS=1.448;HRun=0;HaplotypeScore=144.0527;InbreedingCoeff=0.8468;MQ=75.90;MQ0=0;MQRankSum=-10.135;QD=43.92;ReadPosRankSum=-0.963;VQSLOD=4.3630;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,38:46:72.25:1701,72,0	0/0:17,0:17:51.18:0,51,1676	0/0:26,0:26:72.21:0,72,1985	0/0:14,0:14:33.10:0,33,917	0/0:25,0:25:66.23:0,66,2208	0/0:31,0:31:90.31:0,90,3063	0/0:23,0:23:66.23:0,66,2295	1/1:6,23:29:69.24:1547,69,0	0/0:26,0:26:75.26:0,75,2593	0/0:18,0:18:54.19:0,54,1779	0/0:23,0:23:63.05:0,63,1977	0/0:24,0:24:69.24:0,69,2306	0/0:22,0:22:66.23:0,66,2308	0/0:37,0:37:99:0,108,3584	0/0:35,0:35:99:0,99,3426	0/0:28,0:28:75.24:0,75,2583	0/0:25,0:25:66.23:0,66,2152	1/1:2,9:11:15.02:305,15,0	0/0:22,0:22:63.22:0,63,2114	0/0:30,0:30:90.27:0,90,2957	0/0:38,0:38:99:0,114,3957	0/0:23,0:23:63.21:0,63,2009	0/0:24,0:24:66.23:0,66,2287	0/0:23,0:23:69.24:0,69,2349	0/0:20,0:20:57.20:0,57,1947	0/1:2,23:25:99:1417,0,139	0/0:23,0:23:69.22:0,69,2264	1/1:0,7:7:9.03:213,9,0
chr10	99233831	.	GAGAGAGAGAGAC	G	1837.44	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=-0.498;DP=679;FS=12.847;HRun=0;HaplotypeScore=202.8001;InbreedingCoeff=0.2201;MQ=55.91;MQ0=24;MQRankSum=-0.008;QD=15.31;ReadPosRankSum=-3.152;VQSLOD=0.8704;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:28:99:504,0,122	0/0:8,0:7:10.21:0,10,253	0/0:31,0:13:6.02:0,6,74	0/0:42,0:12:10.85:0,11,103	0/0:18,0:18:40.32:0,40,476	0/0:24,0:21:1.35:0,1,118	0/0:30,0:30:21.03:0,21,240	1/1:13,21:32:30.02:693,30,0	0/0:27,0:26:21.67:0,22,376	0/0:19,0:19:36.55:0,37,472	0/0:20,0:20:32.18:0,32,406	0/0:27,0:26:12.04:0,12,147	0/0:26,0:26:43.77:0,44,619	0/1:24,0:24:0.27:0,0,381	0/0:24,0:24:54.73:0,55,1110	0/0:25,0:25:50.75:0,51,1150	0/0:20,0:20:23.35:0,23,366	0/0:22,0:19:38.86:0,39,1141	0/0:19,0:17:36.28:0,36,447	0/0:25,0:25:26.93:0,27,290	0/0:32,0:30:48.83:0,49,782	0/0:19,0:19:12.48:0,12,153	0/0:20,0:20:23.99:0,24,361	0/0:34,0:34:21.07:0,21,357	0/0:23,0:23:33.77:0,34,342	0/1:22,0:22:99:494,0,181	0/0:23,0:23:49.89:0,50,840	0/1:11,0:11:36.46:268,0,36
chr10	99233841	.	GAC	G	943.41	PASS	AB=0.994;AC=15;AF=0.268;AN=56;BaseQRankSum=7.125;DP=661;FS=25.881;HRun=0;HaplotypeScore=119.4246;InbreedingCoeff=0.1616;MQ=53.60;MQ0=26;MQRankSum=-1.094;QD=3.55;ReadPosRankSum=-4.902;VQSLOD=-0.7146;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,1:30:32.76:240,33,0	0/1:10,0:9:5.30:5,0,95	0/0:18,0:4:5.98:0,6,47	0/0:36,0:7:2.19:0,2,69	0/0:18,0:18:17.03:0,17,335	0/1:25,0:22:2.63:3,0,71	0/0:31,0:30:20.76:0,21,183	0/1:29,0:27:5.80:259,0,6	0/0:27,0:25:17.15:0,17,147	0/1:21,0:21:29.96:30,0,355	0/0:19,0:19:18.90:0,19,211	0/0:26,0:25:11.93:0,12,91	0/1:22,0:22:26.96:27,0,328	0/0:28,0:28:7.71:0,8,54	0/0:24,1:25:2.63:0,3,533	0/0:24,0:24:36.10:0,36,710	0/0:21,0:21:8.17:0,8,88	0/0:19,0:17:22.04:0,22,562	0/1:19,0:16:20.32:20,0,204	0/0:25,1:26:11.08:0,11,194	0/1:34,0:32:12.06:12,0,328	0/1:17,1:18:17.92:18,0,42	0/0:19,0:19:22.56:0,23,179	0/0:34,0:34:19.51:0,20,163	0/0:24,0:24:6.67:0,7,206	1/1:20,0:20:31.61:266,32,0	0/1:25,0:25:7.59:8,0,348	1/1:11,1:10:29.74:220,30,0
chr10	99233843	.	C	CAG	1100.03	PASS	AB=1.000;AC=19;AF=0.365;AN=52;BaseQRankSum=-1.910;DP=655;FS=40.435;HRun=0;HaplotypeScore=125.4573;InbreedingCoeff=0.3310;MQ=53.55;MQ0=25;MQRankSum=-0.030;QD=3.47;ReadPosRankSum=-0.354;VQSLOD=1.0707;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,4:28:29.27:292,29,0	0/0:10,0:9:7.19:0,7,31	./.	0/0:33,0:6:0.88:0,1,2	0/1:21,0:21:10.97:19,0,11	1/1:24,0:21:0.74:2,1,0	0/1:29,0:28:0:0,0,0	1/1:31,0:29:32.41:376,32,0	0/0:26,0:24:5.18:0,5,26	0/1:22,0:22:23.87:24,0,28	0/0:18,0:18:0.12:0,0,14	./.	0/0:22,0:22:9.33:0,9,43	0/0:30,0:30:13.08:0,13,57	0/1:25,0:25:23.21:23,0,92	0/0:23,0:23:26.69:0,27,338	0/0:20,0:21:8.35:0,8,39	0/0:20,0:18:36.73:0,37,411	1/1:20,0:17:4.95:13,5,0	0/1:28,0:28:0:0,0,0	0/1:34,0:32:13.44:13,0,17	0/0:18,0:18:3.35:0,3,14	0/0:17,0:17:5.60:0,6,27	0/0:35,0:35:2.80:0,3,13	0/0:24,0:24:11.19:0,11,53	1/1:21,0:21:16.86:268,17,0	0/1:23,0:23:7.62:23,0,8	1/1:10,0:8:18.04:201,18,0
chr10	99233855	.	GAC	G	4180.77	PASS	AB=0.835;AC=40;AF=0.769;AN=52;BaseQRankSum=6.608;DP=628;FS=9.816;HRun=0;HaplotypeScore=111.8301;InbreedingCoeff=0.2414;MQ=52.79;MQ0=21;MQRankSum=5.229;QD=7.47;ReadPosRankSum=0.101;VQSLOD=2.7799;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:9.45:137,9,0	0/1:9,0:8:0.34:73,0,0	./.	0/1:18,0:4:0:0,0,0	1/1:22,0:22:25.09:250,25,0	1/1:3,23:24:4.22:24,4,0	0/1:3,28:30:0.07:0,0,0	0/1:38,0:36:81.09:114,0,81	1/1:3,20:22:5.98:82,6,0	0/1:20,0:20:25.50:191,0,26	1/1:15,0:15:22.78:178,23,0	./.	1/1:22,2:24:41.19:379,41,0	1/1:1,28:29:17.99:225,18,0	0/1:26,1:27:1.07:360,0,1	0/0:20,0:20:32.84:0,33,363	1/1:5,17:22:11.81:143,12,0	0/0:20,0:18:20.13:0,20,355	0/1:7,15:19:10.13:248,0,10	1/1:3,20:23:8.82:54,9,0	1/1:38,0:35:54.86:458,55,0	1/1:2,18:20:5.66:70,6,0	1/1:5,12:17:6.02:83,6,0	1/1:2,30:32:2.85:41,3,0	1/1:25,1:26:25.43:275,25,0	0/1:6,13:19:18.84:204,0,19	1/1:24,0:24:40.38:448,40,0	1/1:9,0:7:20.67:146,21,0
chr10	99233857	.	C	CAG	76.45	PASS	AB=0.951;AC=14;AF=0.280;AN=50;BaseQRankSum=-2.655;DP=620;FS=7.192;HRun=0;HaplotypeScore=133.5700;InbreedingCoeff=0.0938;MQ=52.66;MQ0=20;MQRankSum=-1.072;QD=0.28;ReadPosRankSum=-3.010;VQSLOD=0.6393;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:24:20.90:48,0,21	0/0:9,0:8:5.16:0,5,25	./.	./.	0/0:21,0:21:3.48:0,3,19	1/1:26,0:24:1.25:3,1,0	0/1:32,0:31:0.02:0,0,0	1/1:38,0:35:1.78:3,2,0	0/0:24,0:22:5.13:0,5,26	0/0:20,0:20:4.24:0,4,18	0/0:15,0:15:3.39:0,3,18	./.	0/0:24,0:24:5.43:0,5,19	0/0:29,0:29:3.52:0,4,36	0/1:27,0:27:25.45:25,0,60	0/1:11,8:19:29.61:30,0,115	0/0:22,0:22:11.11:0,11,51	0/0:20,0:18:19.55:0,20,175	1/1:21,0:19:2.74:24,3,0	0/0:23,0:23:0.47:0,0,1	0/1:37,0:34:11.63:12,0,17	0/0:20,0:20:3.35:0,3,15	0/0:16,0:16:5.60:0,6,26	0/0:31,0:31:2.80:0,3,13	0/1:26,0:26:9.26:9,0,39	0/0:18,0:18:7.34:0,7,34	1/1:25,0:25:6.19:44,6,0	0/0:10,0:8:2.44:0,2,9
chr10	99234518	.	AT	A	5196.22	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-3.595;DP=330;FS=7.589;HRun=11;HaplotypeScore=38.7620;InbreedingCoeff=0.8251;MQ=82.25;MQ0=0;MQRankSum=-1.624;QD=18.69;ReadPosRankSum=2.013;VQSLOD=5.5870;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:32:79.05:645,79,0	1/1:0,5:5:14.98:123,15,0	0/0:6,0:6:11.24:0,11,112	0/0:18,1:18:3.99:0,4,124	1/1:3,10:13:26.96:222,27,0	1/1:2,6:8:17.96:148,18,0	1/1:2,7:9:20.96:172,21,0	1/1:2,9:11:26.94:217,27,0	1/1:1,9:10:20.97:172,21,0	1/1:3,9:12:23.93:195,24,0	1/1:1,9:10:23.96:197,24,0	1/1:2,9:11:26.97:222,27,0	1/1:4,11:15:32.95:271,33,0	1/1:1,7:8:20.97:172,21,0	1/1:1,10:11:29.96:246,30,0	0/0:8,2:10:2.40:0,2,223	1/1:1,10:11:23.97:197,24,0	0/0:5,0:17:31.78:0,32,188	1/1:3,8:12:25.99:201,26,0	1/1:3,7:10:20.96:172,21,0	1/1:4,15:19:29.96:246,30,0	1/1:1,11:12:32.96:271,33,0	1/1:0,3:3:5.12:48,5,0	1/1:3,16:19:41.94:345,42,0	1/1:2,4:6:11.97:99,12,0	1/1:1,15:16:41.95:345,42,0	1/1:1,6:7:17.98:148,18,0	1/1:3,5:8:14.97:123,15,0
chr10	99234635	.	AG	A	1221.06	PASS	AB=0.905;AC=52;AF=0.963;AN=54;BaseQRankSum=-1.771;DP=153;FS=7.215;HRun=1;HaplotypeScore=31.0415;InbreedingCoeff=-0.0181;MQ=90.13;MQ0=1;MQRankSum=-0.608;QD=7.98;ReadPosRankSum=1.100;VQSLOD=0.6486;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:13.64:59,14,0	1/1:2,0:2:5.42:23,5,0	0/1:13,4:13:25.34:25,0,85	0/1:15,0:13:30.52:56,0,31	1/1:4,0:4:10.91:47,11,0	1/1:13,0:13:32.60:142,33,0	1/1:7,0:7:1.01:47,1,0	1/1:12,0:11:21.74:90,22,0	1/1:5,0:5:10.71:44,11,0	1/1:1,0:1:2.22:7,2,0	1/1:5,0:5:11.24:59,11,0	1/1:5,0:5:8.30:40,8,0	1/1:4,0:4:10.78:45,11,0	1/1:1,0:1:2.68:11,3,0	1/1:4,0:4:10.71:44,11,0	1/1:1,0:1:2.68:11,3,0	1/1:9,0:9:24.79:117,25,0	1/1:3,0:3:5.42:23,5,0	1/1:5,0:5:13.19:52,13,0	1/1:1,0:1:2.68:11,3,0	1/1:7,0:7:16.07:66,16,0	1/1:1,0:1:2.68:11,3,0	1/1:2,0:2:5.74:30,6,0	1/1:6,0:6:13.87:66,14,0	1/1:2,0:2:5.60:28,6,0	1/1:6,0:6:14.98:58,15,0	1/1:9,0:9:24.61:107,25,0	./.
chr10	99235754	.	A	ATTCTCT	4962.37	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=0.105;DP=616;FS=0.962;HRun=0;HaplotypeScore=126.4477;InbreedingCoeff=0.7680;MQ=74.64;MQ0=17;MQRankSum=-0.096;QD=11.30;ReadPosRankSum=-0.433;VQSLOD=3.7932;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:44.82:0,45,355	1/1:8,0:8:21:245,21,0	0/0:31,0:20:37.15:0,37,402	0/0:41,0:22:40.52:0,41,386	1/1:20,0:20:41.95:358,42,0	1/1:24,0:24:6.02:179,6,0	1/1:27,0:26:60.23:496,60,0	0/0:20,0:18:47.04:0,47,402	1/1:3,13:20:6.02:208,6,0	1/1:14,0:14:24.01:225,24,0	1/1:17,0:17:30:287,30,0	1/1:5,12:24:5.69:115,6,0	1/1:23,0:23:11.36:136,11,0	1/1:9,10:20:3.48:105,3,0	1/1:17,0:16:5.97:105,6,0	0/0:15,0:15:29.94:0,30,373	1/1:16,0:16:6:105,6,0	0/0:21,0:21:19.07:0,19,431	1/1:17,0:16:25.65:276,26,0	1/1:28,0:27:65.64:548,66,0	0/1:26,0:26:48.56:94,0,49	1/1:14,0:14:24.25:189,24,0	1/1:25,0:25:60.88:593,61,0	1/1:5,28:39:2.72:156,3,0	1/1:19,0:18:39:381,39,0	0/0:19,0:19:48.01:0,48,432	1/1:7,23:37:8.66:160,9,0	0/0:9,0:9:20.89:0,21,165
chr10	99235755	.	TTCTC	T	377.46	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=-0.290;DP=663;FS=1.295;HRun=0;HaplotypeScore=120.9321;InbreedingCoeff=0.5071;MQ=71.94;MQ0=19;MQRankSum=-0.467;QD=10.78;ReadPosRankSum=3.760;VQSLOD=2.9373;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:0.47:0,0,1	0/0:9,0:9:12.03:0,12,152	./.	./.	0/0:20,0:20:9:0,9,81	0/0:26,0:26:6.02:0,6,86	0/0:29,0:28:8.51:0,9,144	0/0:22,0:20:6.07:0,6,49	0/0:22,0:22:5.84:0,6,103	0/0:19,0:18:15.03:0,15,205	0/0:18,0:18:15.05:0,15,247	0/0:27,0:26:6.02:0,6,99	0/0:23,0:23:14.87:0,15,224	0/0:22,0:20:2.83:0,3,52	0/0:7,0:22:11.86:0,12,181	1/1:7,6:14:15.04:213,15,0	0/0:19,0:19:6.02:0,6,100	1/1:13,8:21:18.06:277,18,0	0/0:18,0:17:15.04:0,15,205	0/0:27,0:33:7.85:0,8,81	0/0:27,0:27:9.03:0,9,168	0/0:15,0:15:8.06:0,8,90	0/0:28,0:28:11.35:0,11,171	0/0:40,0:40:15.05:0,15,235	0/0:19,0:18:9.03:0,9,144	0/0:21,0:21:9:0,9,113	0/0:41,0:40:15.15:0,15,219	0/0:11,0:11:3.01:0,3,40
chr10	99235757	.	C	CTCTT	4393.52	PASS	AB=0.944;AC=30;AF=0.536;AN=56;BaseQRankSum=-1.325;DP=686;FS=11.736;HRun=0;HaplotypeScore=141.0545;InbreedingCoeff=0.2644;MQ=68.08;MQ0=20;MQRankSum=1.169;QD=8.72;ReadPosRankSum=3.606;VQSLOD=2.9547;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:44.69:0,45,355	1/1:10,0:10:4.19:113,4,0	0/0:29,0:18:37.15:0,37,402	0/0:38,0:19:38.89:0,39,384	1/1:22,0:22:35.92:360,36,0	0/1:4,20:27:30.51:75,0,31	1/1:31,0:30:35.18:466,35,0	0/0:24,0:22:55.16:0,55,432	1/1:24,0:23:8.39:128,8,0	0/1:23,0:22:40.91:219,0,41	0/1:19,1:20:35:254,0,35	0/1:25,0:24:12.70:55,0,13	0/1:26,0:26:10.43:89,0,10	1/1:24,0:22:3.95:61,4,0	0/1:19,0:18:38.55:51,0,39	0/0:13,0:13:30.02:0,30,304	0/1:21,0:21:1.62:103,0,2	0/0:22,0:22:29.57:0,30,402	1/1:22,0:20:10.53:305,11,0	1/1:35,0:34:61.81:572,62,0	0/1:27,0:27:34.64:93,0,35	1/1:2,14:18:24.25:222,24,0	1/1:29,0:29:39.55:569,40,0	0/1:38,1:39:51.21:146,0,51	1/1:20,0:19:16.15:355,16,0	0/0:21,0:21:54.93:0,55,473	0/1:41,1:41:24.33:156,0,24	0/0:11,0:10:24.37:0,24,186
chr10	99236453	.	T	TAA	10552.78	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-0.668;DP=530;FS=1.930;HRun=11;HaplotypeScore=116.4395;InbreedingCoeff=0.8951;MQ=69.87;MQ0=0;MQRankSum=-2.302;QD=26.12;ReadPosRankSum=-0.086;VQSLOD=4.4359;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:29:54.85:0,55,237	1/1:0,5:7:20.04:234,20,0	0/0:11,0:11:17.38:0,17,151	0/1:8,0:8:14.36:14,0,37	1/1:4,21:25:60.20:836,60,0	1/1:3,14:20:38.61:515,39,0	1/1:1,17:18:45.15:650,45,0	0/0:2,0:25:62.30:0,62,279	1/1:3,12:15:30.10:435,30,0	1/1:5,21:30:68.10:844,68,0	1/1:13,17:30:50.61:670,51,0	1/1:5,12:18:36.09:494,36,0	1/1:3,11:14:21.07:304,21,0	1/1:3,12:18:32.08:393,32,0	1/1:3,13:18:35.96:501,36,0	0/0:10,0:10:30.05:0,30,291	1/1:5,21:29:59.17:794,59,0	0/0:23,0:23:63.07:0,63,611	1/1:5,16:23:51.13:693,51,0	1/1:4,16:21:45.15:638,45,0	1/1:2,12:17:30.37:335,30,0	1/1:6,10:19:39.39:533,39,0	1/1:7,13:20:30.57:434,31,0	1/1:4,10:14:21.03:280,21,0	1/1:6,9:17:27.08:370,27,0	0/0:4,0:19:47.78:0,48,249	1/1:9,13:23:44.60:586,45,0	0/0:5,0:8:8.15:0,8,36
chr10	99236571	.	C	CA	503.75	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.442;DP=662;FS=6.799;HRun=2;HaplotypeScore=85.8380;InbreedingCoeff=0.9994;MQ=80.91;MQ0=0;MQRankSum=-2.229;QD=35.98;ReadPosRankSum=1.167;VQSLOD=4.0821;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,1506	0/0:13,0:13:36.09:0,36,421	0/0:24,0:24:41.50:0,42,730	0/0:21,0:21:51.15:0,51,615	0/0:22,0:22:60.15:0,60,717	0/0:28,0:28:84.26:0,84,1040	0/0:28,0:28:84.25:0,84,1028	0/0:24,0:24:72.23:0,72,892	0/0:15,0:15:42.13:0,42,520	0/0:20,0:20:57.14:0,57,659	0/0:14,0:14:33.10:0,33,409	0/0:25,0:25:66.17:0,66,781	0/0:28,0:28:78.24:0,78,966	0/0:13,0:13:39.12:0,39,483	0/0:29,0:29:87.23:0,87,1040	0/0:15,0:15:45.14:0,45,558	0/0:38,0:38:99:0,99,1212	1/1:0,14:14:42.14:599,42,0	0/0:23,0:23:69.20:0,69,839	0/0:21,0:21:62.94:0,63,736	0/0:53,0:53:99:0,153,1868	0/0:21,0:21:54.13:0,54,632	0/0:18,0:18:51.14:0,51,605	0/0:35,0:35:99:0,99,1226	0/0:28,0:28:81.20:0,81,955	0/0:17,0:17:51.10:0,51,603	0/0:13,0:13:39.11:0,39,469	0/0:18,0:18:54.17:0,54,668
chr10	99237224	.	T	TGAGGACCGACCA	70527.91	PASS	AB=0.963;AC=51;AF=0.911;AN=56;BaseQRankSum=-5.253;DP=716;FS=3.747;HRun=0;HaplotypeScore=224.8303;InbreedingCoeff=0.7252;MQ=74.86;MQ0=0;MQRankSum=-12.918;QD=105.58;ReadPosRankSum=2.580;VQSLOD=4.6996;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,17:37:66.22:3207,66,0	1/1:2,10:13:27.09:1557,27,0	0/0:18,0:18:48.13:0,48,1301	0/0:30,0:30:70.88:0,71,2407	1/1:7,10:17:9.40:548,9,0	1/1:12,13:27:69.24:3596,69,0	1/1:27,8:41:93.32:4792,93,0	1/1:27,2:31:81.26:3478,81,0	1/1:16,11:30:78.27:3921,78,0	1/1:16,12:28:84.29:4226,84,0	1/1:8,9:19:27.09:1547,27,0	1/1:16,16:35:81.28:4526,81,0	1/1:14,10:28:69.24:3387,69,0	1/1:22,18:46:99:5875,117,0	1/1:18,13:32:84.29:4073,84,0	0/1:25,1:26:99:108,0,2498	1/1:13,4:18:36.12:1938,36,0	1/1:6,9:22:33.11:1942,33,0	1/1:16,5:22:51.13:2220,51,0	1/1:11,10:24:36.12:1834,36,0	1/1:19,9:33:51.18:2841,51,0	1/1:9,9:21:33.11:1569,33,0	1/1:4,6:10:18.06:966,18,0	1/1:19,10:32:42:1908,42,0	1/1:11,7:19:42.14:2127,42,0	1/1:10,14:25:75.26:4065,75,0	1/1:8,18:26:69.20:3910,69,0	1/1:0,2:6:6.02:367,6,0
chr10	99237684	.	ACT	A	21830.91	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=1.812;DP=670;FS=0.467;HRun=0;HaplotypeScore=89.9317;InbreedingCoeff=0.9999;MQ=79.01;MQ0=1;MQRankSum=-5.720;QD=37.00;ReadPosRankSum=3.280;VQSLOD=6.7561;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,37:38:99:1444,105,0	1/1:1,18:19:39.09:524,39,0	0/0:23,0:23:52.02:0,52,897	0/0:16,0:14:32.84:0,33,504	1/1:0,22:22:66.22:920,66,0	1/1:0,29:29:81.27:1135,81,0	1/1:3,18:21:48.16:672,48,0	1/1:3,30:33:90.27:1226,90,0	1/1:2,23:25:60.20:840,60,0	1/1:0,21:21:63.21:882,63,0	1/1:3,21:24:63.21:875,63,0	1/1:1,21:22:60.20:840,60,0	1/1:1,20:21:51.17:714,51,0	1/1:2,23:25:66.22:924,66,0	1/1:2,23:25:60.20:836,60,0	0/0:19,0:19:57.20:0,57,1026	1/1:0,24:23:63.21:882,63,0	0/0:22,0:22:63.22:0,63,1123	1/1:3,19:22:57.19:796,57,0	1/1:1,26:27:69.23:955,69,0	1/1:2,28:30:84.28:1176,84,0	1/1:0,24:24:69.23:966,69,0	1/1:1,16:17:51.14:690,51,0	1/1:3,25:28:72.24:1008,72,0	1/1:0,24:24:69.23:961,69,0	1/1:2,18:20:51.17:714,51,0	1/1:0,25:25:69.23:966,69,0	1/1:0,24:24:63.21:882,63,0
chr10	99237788	.	TTCTC	T	1556.15	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.997;DP=665;FS=0.000;HRun=0;HaplotypeScore=152.1232;InbreedingCoeff=0.9910;MQ=77.23;MQ0=0;MQRankSum=-5.206;QD=38.90;ReadPosRankSum=2.798;VQSLOD=3.9293;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,36:40:87.30:1651,87,0	0/0:6,0:6:18.06:0,18,486	0/0:33,0:33:92.68:0,93,2248	0/0:29,0:27:72.03:0,72,1784	0/0:19,0:19:54.19:0,54,1407	0/0:21,0:21:57.20:0,57,1523	0/0:18,0:18:54.17:0,54,1354	0/0:40,0:40:99:0,111,2855	0/0:27,0:27:69.24:0,69,1822	0/0:19,0:19:57.19:0,57,1465	0/0:9,0:9:27.09:0,27,703	0/0:21,0:21:60.21:0,60,1618	0/0:19,0:19:54.17:0,54,1401	0/0:14,0:14:42.11:0,42,1005	0/0:29,0:29:81.28:0,81,2006	0/0:25,0:25:69.24:0,69,1770	0/0:25,0:25:66.23:0,66,1750	0/0:17,0:17:48.12:0,48,1210	0/0:15,0:15:45.14:0,45,1037	0/0:30,0:30:87.30:0,87,2247	0/0:35,0:35:99:0,99,2390	0/0:19,0:19:45.15:0,45,1170	0/0:22,0:22:66.23:0,66,1626	0/0:30,0:30:81.26:0,81,2121	0/0:25,0:25:69.22:0,69,1769	0/0:28,0:28:81.27:0,81,2107	0/0:31,0:31:87.26:0,87,2175	0/0:19,0:19:45.15:0,45,1173
chr10	99237878	.	A	AC	11046.41	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=3.110;DP=528;FS=0.000;HRun=6;HaplotypeScore=106.1837;InbreedingCoeff=0.9987;MQ=87.79;MQ0=0;MQRankSum=-2.296;QD=30.68;ReadPosRankSum=0.874;VQSLOD=4.3609;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:75.17:0,75,764	1/1:1,9:10:27.09:340,27,0	0/0:20,0:20:42.07:0,42,420	0/0:20,0:20:45.13:0,45,430	1/1:1,10:11:30.10:377,30,0	1/1:1,13:14:36.12:452,36,0	1/1:1,23:24:51.16:641,51,0	0/0:26,0:26:72.15:0,72,729	1/1:3,19:22:51.16:641,51,0	1/1:2,15:17:42.13:528,42,0	1/1:1,10:11:23.99:280,24,0	1/1:1,17:18:48.15:604,48,0	1/1:4,14:18:44.96:549,45,0	1/1:0,18:18:54.17:679,54,0	1/1:7,17:24:66.19:805,66,0	0/0:21,0:21:45.07:0,45,452	1/1:3,24:27:66.21:830,66,0	0/0:14,0:14:33.07:0,33,336	1/1:6,14:20:42.13:527,42,0	1/1:2,19:21:54.17:677,54,0	1/1:2,28:30:72.23:905,72,0	1/1:4,11:15:30.10:377,30,0	1/1:6,5:11:24.05:275,24,0	1/1:4,18:22:51.16:636,51,0	1/1:2,9:12:30.09:371,30,0	0/0:19,0:19:45.10:0,45,459	1/1:2,13:15:45.13:552,45,0	0/0:14,0:14:33.07:0,33,337
chr10	99237921	.	C	CTG	7815.50	PASS	AB=0.761;AC=39;AF=0.696;AN=56;BaseQRankSum=-0.038;DP=589;FS=3.053;HRun=0;HaplotypeScore=143.6901;InbreedingCoeff=-0.1529;MQ=59.77;MQ0=6;MQRankSum=0.381;QD=14.61;ReadPosRankSum=0.223;VQSLOD=4.7015;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:47:21.35:171,21,0	1/1:5,1:6:5.99:68,6,0	0/0:31,0:18:12.01:0,12,118	0/0:23,0:15:8.28:0,8,46	0/1:12,2:14:41.62:240,0,42	0/1:13,6:19:99:368,0,129	0/1:13,9:22:35.81:383,0,36	1/1:36,0:35:21.86:168,22,0	1/1:10,9:19:32.44:442,32,0	1/1:10,0:16:20.55:182,21,0	1/1:6,3:12:7.15:181,7,0	0/1:8,4:12:10.27:272,0,10	1/1:7,5:13:20.66:300,21,0	1/1:13,1:14:14.84:218,15,0	0/1:18,11:29:27.22:510,0,27	1/1:6,14:21:36.11:536,36,0	0/1:21,13:34:45.84:621,0,46	1/1:5,0:11:9:79,9,0	0/1:17,1:18:22.24:101,0,22	0/1:17,4:21:32.12:242,0,32	0/1:23,7:31:6.38:430,0,6	1/1:11,7:19:1.73:380,2,0	0/1:6,8:15:10.17:297,0,10	0/1:19,12:31:78.68:514,0,79	0/1:13,5:18:41.58:290,0,42	1/1:20,0:22:39.10:332,39,0	0/1:9,11:22:23.48:414,0,23	1/1:5,0:11:8.99:75,9,0
chr10	99238110	.	CCCCT	C	4690.85	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=-6.260;DP=357;FS=17.829;HRun=0;HaplotypeScore=87.8139;InbreedingCoeff=0.2362;MQ=85.59;MQ0=0;MQRankSum=-7.449;QD=26.96;ReadPosRankSum=1.663;VQSLOD=3.2361;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:78.05:1365,78,0	0/1:9,0:9:0.80:1,0,235	0/0:16,0:17:47.69:0,48,1047	0/0:12,0:12:33.08:0,33,702	0/0:16,0:16:20.83:0,21,187	0/1:12,0:12:22.32:22,0,182	0/0:13,0:13:26.93:0,27,329	1/1:2,27:29:78.25:1420,78,0	0/0:10,0:9:14.87:0,15,170	0/1:11,0:11:10.60:11,0,230	0/0:5,0:5:3:0,3,37	0/0:5,0:5:14.99:0,15,177	0/1:11,0:11:20.91:21,0,124	0/1:8,0:8:31.38:31,0,100	0/0:19,0:19:42.15:0,42,602	0/0:17,0:17:51.16:0,51,1274	0/0:22,0:22:31.34:0,31,611	0/0:9,0:9:27.09:0,27,701	0/0:13,0:13:3.06:0,3,224	0/0:7,0:7:2.17:0,2,47	0/1:6,0:6:14.90:15,0,104	0/0:4,0:4:2.98:0,3,24	0/1:7,0:7:18.72:19,0,42	0/0:8,0:8:21.03:0,21,320	0/0:6,0:6:5.97:0,6,56	1/1:0,22:22:63.20:1147,63,0	0/1:15,0:15:22.51:23,0,475	1/1:0,15:15:33.11:618,33,0
chr10	99238113	.	CT	C	3026.36	PASS	AB=0.926;AC=41;AF=0.732;AN=56;BaseQRankSum=3.234;DP=350;FS=19.064;HRun=1;HaplotypeScore=73.9758;InbreedingCoeff=0.2840;MQ=90.02;MQ0=0;MQRankSum=-6.436;QD=10.40;ReadPosRankSum=-3.807;VQSLOD=-0.5102;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:74.90:403,75,0	0/1:7,0:7:1.82:79,0,2	0/0:21,0:21:50.12:0,50,583	0/0:12,0:12:10.09:0,10,324	1/1:2,10:12:12.68:198,13,0	1/1:12,1:13:8.39:144,8,0	0/1:13,0:13:0.50:38,0,0	1/1:27,0:27:75:413,75,0	0/1:7,1:7:0.37:62,0,0	0/1:11,0:11:16.77:40,0,17	1/1:6,1:7:3:25,3,0	1/1:5,1:6:6.67:83,7,0	1/1:8,1:9:6.12:107,6,0	1/1:8,0:8:14.64:123,15,0	1/1:17,1:18:2.43:138,2,0	0/0:17,0:17:51.16:0,51,696	0/1:17,4:21:32.05:281,0,32	0/0:9,0:9:27.09:0,27,376	1/1:8,3:11:5.80:115,6,0	1/1:8,1:9:8.75:88,9,0	1/1:7,0:7:10.05:99,10,0	1/1:3,1:4:2.89:16,3,0	1/1:7,1:8:2.81:47,3,0	0/1:6,1:7:21.02:29,0,21	1/1:5,0:5:8.95:71,9,0	1/1:22,0:22:60.50:328,60,0	0/1:12,2:14:27.43:97,0,27	1/1:15,0:15:31.63:167,32,0
chr10	99239433	.	G	GA	15734.91	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-9.762;DP=590;FS=10.366;HRun=7;HaplotypeScore=53.2525;InbreedingCoeff=0.9920;MQ=66.06;MQ0=1;MQRankSum=-1.933;QD=30.38;ReadPosRankSum=-0.446;VQSLOD=4.5208;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,43:45:99:1447,120,0	1/1:0,10:10:30.09:362,30,0	0/0:13,0:10:26.65:0,27,227	0/0:10,0:6:15:0,15,135	1/1:5,16:21:19.19:515,19,0	1/1:2,22:24:63.19:761,63,0	1/1:1,25:26:66.20:797,66,0	1/1:3,18:21:54.12:625,54,0	1/1:5,23:28:63.19:761,63,0	1/1:3,25:28:75.21:893,75,0	1/1:2,13:15:36.03:402,36,0	1/1:3,12:15:33.10:399,33,0	1/1:1,16:17:45.14:544,45,0	1/1:0,23:23:66.20:797,66,0	1/1:0,20:20:54.17:652,54,0	0/0:20,0:20:51.07:0,51,487	1/1:2,22:23:63.19:761,63,0	0/0:29,0:29:74.76:0,75,698	1/1:3,13:16:45.10:527,45,0	1/1:2,18:20:54.17:652,54,0	1/1:7,15:22:36.11:435,36,0	1/1:0,18:18:45.10:527,45,0	1/1:1,22:23:57.17:679,57,0	1/1:0,28:28:81.20:961,81,0	1/1:1,19:20:51.16:616,51,0	1/1:3,23:26:69.20:824,69,0	1/1:2,17:19:45.14:544,45,0	1/1:1,8:9:21.06:254,21,0
chr10	99239603	.	C	CT	562.97	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.774;DP=591;FS=5.302;HRun=8;HaplotypeScore=107.9406;InbreedingCoeff=0.9147;MQ=70.50;MQ0=3;MQRankSum=-0.239;QD=21.65;ReadPosRankSum=1.029;VQSLOD=3.2486;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,895	0/0:8,0:8:21.01:0,21,192	0/0:15,0:13:14.94:0,15,126	0/0:13,0:10:11.36:0,11,89	0/0:19,1:20:16.33:0,16,386	0/0:16,0:16:39.01:0,39,357	0/0:23,0:23:57.02:0,57,522	0/0:25,0:25:54.02:0,54,494	0/0:23,0:23:57:0,57,516	0/0:36,0:35:81.04:0,81,741	0/0:17,0:17:48.02:0,48,437	0/0:21,0:21:60.03:0,60,548	0/0:17,0:17:45.01:0,45,408	0/0:18,0:18:44.05:0,44,390	0/0:29,0:29:72:0,72,654	0/0:13,0:13:17.13:0,17,283	0/0:32,0:32:84.04:0,84,769	1/1:6,20:26:57.17:658,57,0	0/0:18,0:18:38.58:0,39,332	0/0:20,0:21:53.05:0,53,469	0/0:28,2:32:15.84:0,16,618	0/0:19,0:19:54:0,54,487	0/0:25,0:25:53.98:0,54,482	0/0:18,0:18:48.01:0,48,434	0/0:20,0:20:47.97:0,48,436	0/0:19,0:19:38.99:0,39,352	0/0:19,0:19:57:0,57,511	0/0:9,0:9:24.01:0,24,219
chr10	99240431	.	AG	A	13782.42	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=2.921;DP=576;FS=2.776;HRun=6;HaplotypeScore=61.1956;InbreedingCoeff=0.9912;MQ=85.17;MQ0=1;MQRankSum=-7.459;QD=28.01;ReadPosRankSum=3.586;VQSLOD=5.4967;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:96.24:1032,96,0	1/1:1,4:5:12.03:129,12,0	0/0:31,0:31:78.25:0,78,1007	0/0:21,0:21:48.16:0,48,632	1/1:3,17:20:48.12:516,48,0	1/1:2,15:17:42.10:451,42,0	1/1:2,17:19:48.12:516,48,0	1/1:2,16:18:48.11:508,48,0	1/1:1,18:19:51.12:543,51,0	1/1:0,20:20:57.14:609,57,0	1/1:0,20:20:57.14:610,57,0	1/1:2,23:25:69.17:741,69,0	1/1:4,19:23:48.12:516,48,0	1/1:0,19:19:51.13:548,51,0	1/1:1,13:14:33.08:355,33,0	0/0:15,0:15:42.12:0,42,537	1/1:1,25:26:75.19:806,75,0	0/0:17,0:17:48.16:0,48,631	1/1:3,19:22:57.10:594,57,0	1/1:0,24:24:72.18:773,72,0	1/1:4,33:36:84.21:903,84,0	1/1:1,20:21:60.15:645,60,0	1/1:0,16:16:39.10:419,39,0	1/1:0,22:22:60.15:645,60,0	1/1:2,20:22:57.14:613,57,0	1/1:1,17:18:51.10:538,51,0	1/1:2,15:17:39.06:419,39,0	1/1:0,12:12:33.08:355,33,0
chr10	99244303	.	TGCTCAAGCACATCCTGA	T	33819.09	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=16.044;DP=549;FS=17.654;HRun=0;HaplotypeScore=306.9641;InbreedingCoeff=0.9734;MQ=86.19;MQ0=0;MQRankSum=-17.110;QD=102.48;ReadPosRankSum=3.381;VQSLOD=3.4426;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,135,10616	1/1:2,4:6:12.04:596,12,0	0/0:19,0:19:54.19:0,54,3044	0/0:30,0:30:81.26:0,81,4621	1/1:2,16:18:48.16:2161,48,0	1/1:2,14:16:42.14:2085,42,0	1/1:5,15:20:51.12:2280,51,0	0/0:29,0:29:81.28:0,81,5094	1/1:6,15:21:54.17:2491,54,0	1/1:6,18:24:57.19:2602,57,0	1/1:4,9:13:33.11:1378,33,0	1/1:5,17:22:57.20:2662,57,0	1/1:5,15:20:48.16:2321,48,0	1/1:3,10:13:30.10:1490,30,0	1/1:3,13:16:39.13:1933,39,0	0/0:35,0:35:99:0,105,8159	1/1:5,9:14:24.07:1067,24,0	0/0:18,0:17:54.19:0,54,4516	1/1:7,6:13:24.08:1067,24,0	1/1:2,8:9:21.07:1043,21,0	1/1:10,5:15:15.05:619,15,0	1/1:3,14:17:39.13:1919,39,0	1/1:1,13:14:36.12:1741,36,0	1/1:14,5:19:6.02:298,6,0	1/1:5,11:16:33.11:1573,33,0	0/0:27,0:27:78.27:0,78,6222	1/1:7,16:23:54.17:2494,54,0	0/0:12,0:12:36.12:0,36,2737
chr10	99244357	.	TG	T	15747.22	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=14.238;DP=629;FS=25.158;HRun=1;HaplotypeScore=197.5784;InbreedingCoeff=0.9994;MQ=72.40;MQ0=0;MQRankSum=-11.176;QD=36.88;ReadPosRankSum=1.620;VQSLOD=1.5792;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,1595	1/1:0,8:8:24.08:335,24,0	0/0:12,0:12:29.19:0,29,457	0/0:19,0:18:47.33:0,47,679	1/1:2,30:30:80.93:1012,81,0	1/1:0,21:21:63.17:857,63,0	1/1:1,26:27:75.06:958,75,0	0/0:23,0:23:69.23:0,69,1082	1/1:1,27:28:78.19:1046,78,0	1/1:1,30:31:90.21:1213,90,0	1/1:0,14:14:36.03:477,36,0	1/1:1,24:25:75.22:1024,75,0	1/1:0,23:23:66.19:899,66,0	1/1:0,14:14:38.98:476,39,0	1/1:0,27:27:81.18:1087,81,0	0/0:27,0:27:81.26:0,81,1271	1/1:0,11:11:32.96:411,33,0	0/0:29,0:28:84.29:0,84,1336	1/1:0,19:19:57.19:795,57,0	1/1:0,23:22:60.20:838,60,0	1/1:1,13:14:29.98:372,30,0	1/1:0,20:20:54.14:731,54,0	1/1:0,21:20:54.09:728,54,0	1/1:0,25:25:57.15:773,57,0	1/1:0,22:22:63.21:879,63,0	0/0:32,1:33:57.59:0,58,1492	1/1:2,20:22:63.14:837,63,0	0/0:21,0:21:51.17:0,51,814
chr10	99244427	.	CTT	C	4017.17	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-11.583;DP=574;FS=9.904;HRun=7;HaplotypeScore=118.3420;InbreedingCoeff=0.9620;MQ=66.38;MQ0=1;MQRankSum=2.222;QD=32.93;ReadPosRankSum=0.144;VQSLOD=2.3869;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,36:40:99:1234,99,0	0/0:12,0:12:22.49:0,22,265	0/0:26,0:12:6.28:0,6,213	0/0:14,0:9:14.90:0,15,128	0/0:28,0:27:70.13:0,70,764	0/0:18,0:18:54.16:0,54,642	0/0:13,0:13:32.58:0,33,352	1/1:3,24:27:72.20:889,72,0	0/0:15,0:15:32.39:0,32,367	0/0:25,0:25:65.91:0,66,681	0/0:21,0:21:50.57:0,51,548	0/0:21,0:22:59.62:0,60,654	0/0:10,0:11:29.47:0,29,309	0/0:5,0:5:15.05:0,15,183	0/0:23,0:22:56.67:0,57,656	0/0:20,0:20:57.20:0,57,979	0/0:19,0:19:57.17:0,57,680	0/0:22,0:22:60.66:0,61,780	0/0:22,0:22:52.48:0,52,553	0/0:21,0:21:49.90:0,50,527	0/0:12,0:12:28.06:0,28,293	0/0:15,0:15:34.99:0,35,398	0/0:5,0:23:40.78:0,41,154	0/0:13,0:13:23.29:0,23,252	0/0:14,0:14:31.38:0,31,316	1/1:2,29:31:87.26:1092,87,0	0/0:37,0:37:99:0,99,1157	1/1:0,24:24:63.20:803,63,0
chr10	99244434	.	TA	T	375.12	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-2.205;DP=576;FS=0.642;HRun=9;HaplotypeScore=117.0679;InbreedingCoeff=0.6604;MQ=66.20;MQ0=1;MQRankSum=2.656;QD=8.53;ReadPosRankSum=2.138;VQSLOD=1.8886;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:88.05:0,88,593	0/0:10,0:10:25.56:0,26,272	0/0:26,0:12:10.01:0,10,101	0/0:13,0:8:7.90:0,8,48	0/0:27,0:26:63.61:0,64,703	0/0:18,0:18:54.13:0,54,597	0/0:12,0:12:33.04:0,33,362	0/0:29,0:29:53.71:0,54,442	0/0:15,0:15:30.09:0,30,342	0/0:25,0:25:69.97:0,70,740	0/0:21,0:21:53.96:0,54,589	0/0:22,0:22:56.50:0,57,638	0/0:11,0:11:18.27:0,18,270	0/0:6,0:6:18:0,18,190	0/0:21,0:20:57.16:0,57,650	0/0:21,0:21:51.13:0,51,571	0/0:22,0:22:66.10:0,66,712	1/1:5,18:23:47.99:432,48,0	0/0:20,0:20:54.05:0,54,574	0/0:24,0:24:60.48:0,60,618	0/0:15,0:15:35.99:0,36,361	0/0:15,0:15:36.06:0,36,398	0/1:21,0:20:6.79:49,0,7	0/0:12,0:12:24.51:0,25,261	0/0:12,0:12:27.08:0,27,307	0/0:32,0:32:79.32:0,79,526	0/0:37,0:37:99:0,108,1173	0/0:27,0:27:68.72:0,69,400
chr10	99244658	.	TTTTG	T	6116.70	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=1.950;DP=534;FS=20.760;HRun=0;HaplotypeScore=131.8491;InbreedingCoeff=0.7872;MQ=60.73;MQ0=2;MQRankSum=1.113;QD=15.52;ReadPosRankSum=2.719;VQSLOD=3.2683;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:20:93.02:106,0,93	1/1:8,0:8:20.87:207,21,0	0/0:13,0:8:11.63:0,12,205	0/0:16,0:10:6.02:0,6,86	1/1:8,12:20:24.01:322,24,0	1/1:20,4:24:53.10:798,53,0	1/1:15,2:15:24.01:274,24,0	0/0:47,0:44:63.99:0,64,916	1/1:2,12:14:15.05:244,15,0	1/1:15,2:17:33.10:479,33,0	1/1:4,12:16:20.89:216,21,0	1/1:13,1:14:24.05:295,24,0	1/1:5,16:21:2.94:49,3,0	1/1:1,11:12:3.01:49,3,0	1/1:13,0:13:27.05:331,27,0	0/0:18,0:18:42.03:0,42,819	1/1:27,1:29:23.51:441,24,0	1/1:5,13:18:26.76:440,27,0	1/1:11,9:20:26.97:348,27,0	1/1:7,9:16:21.06:270,21,0	1/1:8,4:12:24.01:298,24,0	1/1:4,10:14:14.74:118,15,0	1/1:3,15:18:8.88:101,9,0	1/1:19,1:21:17.98:225,18,0	1/1:15,0:15:23.61:250,24,0	0/0:28,0:28:54.12:0,54,680	1/1:8,25:33:17.86:256,18,0	0/0:18,0:18:42.03:0,42,589
chr10	99244695	.	TC	T	790.15	PASS	AB=0.899;AC=11;AF=0.196;AN=56;BaseQRankSum=2.941;DP=460;FS=3.959;HRun=1;HaplotypeScore=144.8225;InbreedingCoeff=-0.1925;MQ=43.38;MQ0=8;MQRankSum=-0.634;QD=4.32;ReadPosRankSum=3.208;VQSLOD=0.7824;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,2:18:30.42:30,0,272	0/1:5,0:5:0.20:0,0,92	0/0:19,0:12:28.65:0,29,408	0/0:23,0:6:7.62:0,8,134	0/0:18,0:16:26.91:0,27,222	0/0:25,0:25:19.88:0,20,452	0/0:13,0:8:11.34:0,11,121	0/1:28,6:27:99:140,0,411	0/0:11,0:11:17.26:0,17,198	0/1:17,0:14:15.71:16,0,166	0/0:13,0:12:15.62:0,16,99	0/1:12,1:13:33.53:34,0,144	0/0:19,0:19:14.98:0,15,188	0/0:15,0:15:18.05:0,18,214	0/1:7,0:7:1.24:1,0,68	0/0:13,0:13:36.11:0,36,553	0/1:24,1:25:36.24:36,0,226	0/0:17,0:17:36.36:0,36,521	0/0:13,0:10:14.19:0,14,241	0/0:12,0:12:27.49:0,27,245	0/1:16,1:17:4.37:4,0,246	0/0:14,0:14:3.93:0,4,176	0/0:13,0:13:20.67:0,21,240	0/0:16,1:17:0.40:0,0,138	0/1:9,0:9:4.30:4,0,106	0/1:13,9:22:99:277,0,226	0/0:22,0:22:18.28:0,18,166	0/1:4,10:14:5.68:377,0,6
chr10	99244705	.	T	TCC	2286.48	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=2.999;DP=444;FS=14.454;HRun=0;HaplotypeScore=144.9659;InbreedingCoeff=0.2727;MQ=39.57;MQ0=21;MQRankSum=2.357;QD=6.40;ReadPosRankSum=5.306;VQSLOD=1.9443;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:16:17.81:0,18,121	1/1:6,0:6:14.78:95,15,0	0/0:16,0:10:20.65:0,21,190	0/0:23,0:6:8.90:0,9,76	1/1:13,0:11:5.17:50,5,0	1/1:22,0:21:18.61:276,19,0	1/1:12,0:8:11.83:57,12,0	0/1:29,0:24:86.92:182,0,87	1/1:7,0:6:5.87:35,6,0	1/1:15,0:12:34.49:247,34,0	1/1:12,0:10:13.25:72,13,0	0/1:13,0:12:33.39:49,0,33	1/1:16,0:16:11.73:77,12,0	1/1:11,0:11:14.23:79,14,0	1/1:8,0:8:1.04:86,1,0	0/0:10,0:10:26.81:0,27,235	0/1:31,0:30:22.24:168,0,22	0/0:17,0:17:35.46:0,35,257	0/1:14,0:11:10.13:128,0,10	1/1:12,0:12:16.52:102,17,0	0/1:15,0:14:11.93:125,0,12	0/1:13,0:13:0.09:55,0,0	1/1:11,0:11:14.68:96,15,0	0/1:20,0:15:4.53:89,0,5	1/1:12,0:11:12.01:133,12,0	1/1:15,11:25:12.43:249,12,0	0/1:21,0:21:13.26:13,0,34	0/1:18,0:17:5.13:5,0,97
chr10	99244707	.	CTCTCTCTCTCTCTCTCTCT	C	2390.54	PASS	AB=0.982;AC=20;AF=0.357;AN=56;BaseQRankSum=1.837;DP=464;FS=3.444;HRun=0;HaplotypeScore=240.6154;InbreedingCoeff=-0.3219;MQ=38.89;MQ0=32;MQRankSum=-6.517;QD=8.33;ReadPosRankSum=3.489;VQSLOD=2.6073;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:19:17.14:17,0,171	0/1:6,0:6:41.05:41,0,45	0/0:16,0:10:23.79:0,24,287	0/0:22,0:6:10.75:0,11,118	0/1:14,0:11:25.98:26,0,42	0/1:22,1:22:99:185,0,205	0/0:11,0:7:8.74:0,9,54	0/0:31,0:27:68.73:0,69,581	0/1:7,0:6:1.97:37,0,2	0/1:15,0:12:37.06:37,0,119	0/1:13,0:11:19.78:34,0,20	0/1:10,1:12:99:379,0,108	0/1:15,0:15:16.74:64,0,17	1/1:12,0:11:14.91:164,15,0	0/1:8,0:8:53.15:165,0,53	0/0:14,0:13:33.99:0,34,975	0/1:32,0:30:99:385,0,170	0/0:16,0:16:20.91:0,21,292	0/0:14,0:10:25.76:0,26,131	0/1:12,0:12:38.75:113,0,39	0/1:15,0:14:27.61:28,0,91	0/1:15,0:14:9.67:153,0,10	0/1:11,0:11:16.68:83,0,17	0/1:19,1:15:52.62:90,0,53	0/1:12,0:11:22.59:209,0,23	0/0:27,0:26:68.21:0,68,698	0/1:20,1:21:3.30:346,0,3	0/0:26,0:19:46.56:0,47,772
chr10	99245999	.	GCC	G	10187.44	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-7.245;DP=539;FS=0.957;HRun=11;HaplotypeScore=85.1878;InbreedingCoeff=0.9488;MQ=70.78;MQ0=3;MQRankSum=2.600;QD=24.43;ReadPosRankSum=3.702;VQSLOD=4.9079;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:42.02:0,42,374	1/1:3,4:7:12.02:128,12,0	0/0:15,0:14:29.86:0,30,317	0/0:17,0:16:26.18:0,26,278	1/1:2,14:16:42.09:447,42,0	1/1:3,18:21:42.08:447,42,0	1/1:1,16:17:42.11:447,42,0	0/0:19,0:19:26.64:0,27,211	1/1:2,20:23:47.85:491,48,0	1/1:1,14:15:42.10:447,42,0	1/1:1,9:11:21:279,21,0	1/1:3,22:25:63.14:666,63,0	1/1:2,12:14:36.07:383,36,0	1/1:1,19:21:47.84:491,48,0	1/1:3,22:26:60.10:694,60,0	0/0:17,0:18:43.35:0,43,570	1/1:6,32:39:92.95:970,93,0	0/0:5,0:8:14.97:0,15,151	1/1:5,17:22:51.11:542,51,0	1/1:4,14:19:10.44:393,10,0	1/1:9,28:36:69.14:735,69,0	1/1:2,16:18:42.09:446,42,0	1/1:3,14:16:39.09:415,39,0	1/1:4,24:27:52.32:715,52,0	1/1:3,17:20:48.11:511,48,0	0/0:14,1:15:4.09:0,4,260	1/1:2,19:21:51.12:543,51,0	0/0:6,0:6:9:0,9,80
chr10	99246003	.	C	CCCCCA	2865.93	PASS	AB=0.556;AC=7;AF=0.125;AN=56;BaseQRankSum=-9.053;DP=542;FS=2.985;HRun=0;HaplotypeScore=149.9491;InbreedingCoeff=0.7964;MQ=72.29;MQ0=3;MQRankSum=-3.307;QD=41.54;ReadPosRankSum=-0.097;VQSLOD=3.8293;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:29:19.83:1174,20,0	0/0:5,0:5:12.04:0,12,160	0/0:16,0:15:19.22:0,19,337	0/0:18,0:18:29.94:0,30,327	0/0:16,0:16:48.13:0,48,603	0/0:19,0:19:45.13:0,45,584	0/0:16,0:16:42.14:0,42,559	1/1:9,10:19:25.49:700,25,0	0/0:22,0:22:48.16:0,48,637	0/0:18,0:18:45.14:0,45,585	0/0:11,0:11:30.10:0,30,400	0/0:25,0:25:63.21:0,63,842	0/0:14,0:14:42.11:0,42,530	0/0:22,0:22:51.15:0,51,658	0/0:24,0:24:69.23:0,69,919	0/0:19,0:19:50.07:0,50,709	0/0:41,0:41:99:0,102,1309	0/0:8,0:8:12.52:0,13,73	0/0:21,0:21:55.72:0,56,696	0/0:19,0:19:45.14:0,45,579	0/0:33,0:32:72.22:0,72,939	0/0:19,0:19:44.41:0,44,584	0/0:17,0:16:39.13:0,39,517	0/0:27,0:26:75.22:0,75,968	0/0:22,0:22:51.15:0,51,664	0/1:3,12:15:26.22:877,0,26	0/0:21,0:21:54.16:0,54,703	1/1:0,5:6:9.03:257,9,0
chr10	99246643	.	A	ACG	2516.40	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.722;DP=610;FS=4.736;HRun=0;HaplotypeScore=88.5810;InbreedingCoeff=0.9995;MQ=92.17;MQ0=0;MQRankSum=-11.743;QD=35.44;ReadPosRankSum=0.359;VQSLOD=5.6189;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:68.90:1022,69,0	0/0:9,0:9:27.08:0,27,417	0/0:28,0:28:81.25:0,81,1274	0/0:25,0:25:72.24:0,72,1143	0/0:19,0:19:57.19:0,57,925	0/0:19,0:19:54.17:0,54,851	0/0:20,0:20:57.17:0,57,904	1/1:6,12:18:38.92:559,39,0	0/0:25,0:25:75.26:0,75,1224	0/0:25,0:25:75.24:0,75,1181	0/0:19,0:19:57.18:0,57,907	0/0:24,0:24:72.16:0,72,1137	0/0:12,0:12:36.12:0,36,587	0/0:26,0:26:78.27:0,78,1270	0/0:23,0:23:69.24:0,69,1126	0/0:19,0:19:57.19:0,57,928	0/0:29,0:29:84.29:0,84,1366	0/0:20,0:20:60.18:0,60,952	0/0:22,0:22:66.23:0,66,1074	0/0:27,0:27:78.25:0,78,1248	0/0:26,0:26:78.27:0,78,1255	0/0:27,0:27:81.28:0,81,1322	0/0:21,0:21:63.22:0,63,1025	0/0:22,0:22:66.23:0,66,1077	0/0:23,0:23:66.21:0,66,1054	1/1:2,13:15:45.15:651,45,0	0/0:29,0:29:84.29:0,84,1350	1/1:0,10:10:30.10:444,30,0
chr10	99246645	.	T	TTC	3621.03	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=14.178;DP=630;FS=1.972;HRun=0;HaplotypeScore=93.2194;InbreedingCoeff=0.9993;MQ=90.33;MQ0=0;MQRankSum=-12.296;QD=40.23;ReadPosRankSum=-3.079;VQSLOD=4.4687;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,26:34:89.04:1169,89,0	0/0:8,0:8:24.08:0,24,392	0/0:26,0:26:75.24:0,75,1195	0/0:26,0:26:72.22:0,72,1120	0/0:22,0:22:60.19:0,60,950	0/0:18,0:18:51.17:0,51,810	0/0:19,0:19:57.18:0,57,897	1/1:16,12:28:81.24:1255,81,0	0/0:25,0:25:75.26:0,75,1218	0/0:26,0:26:72.25:0,72,1174	0/0:18,0:18:54.17:0,54,851	0/0:24,0:24:72.25:0,72,1165	0/0:12,0:12:36.12:0,36,587	0/0:25,0:25:75.24:0,75,1194	0/0:23,0:23:69.22:0,69,1102	0/0:19,0:19:57.19:0,57,926	0/0:30,0:30:90.26:0,90,1411	0/0:21,0:21:60.16:0,60,942	0/0:22,0:22:63.22:0,63,1023	0/0:27,0:27:81.26:0,81,1290	0/0:26,0:26:69.23:0,69,1120	0/0:27,0:27:81.28:0,81,1316	0/0:21,0:21:60.20:0,60,976	0/0:22,0:22:66.23:0,66,1066	0/0:23,0:23:69.22:0,69,1079	1/1:3,13:18:51.17:764,51,0	0/0:30,0:30:87.25:0,87,1331	1/1:0,9:10:30.10:433,30,0
chr10	99247233	.	CTGTGTG	C	1407	PASS	AB=0.857;AC=29;AF=0.580;AN=50;BaseQRankSum=2.805;DP=594;FS=11.656;HRun=0;HaplotypeScore=146.1872;InbreedingCoeff=-0.0602;MQ=69.24;MQ0=7;MQRankSum=-2.491;QD=3.18;ReadPosRankSum=-3.738;VQSLOD=0.8493;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:7.93:8,0,18	1/1:2,4:5:6.02:120,6,0	./.	./.	./.	0/1:14,6:21:28.98:52,0,29	1/1:20,1:21:8.18:75,8,0	0/1:26,0:26:0:0,0,0	0/1:17,6:23:8.50:54,0,9	0/1:23,0:25:8.75:145,0,9	1/1:4,3:8:2.99:24,3,0	0/1:20,8:29:36.34:132,0,36	1/1:9,3:13:2.92:27,3,0	1/1:14,7:22:1.93:51,2,0	0/0:13,8:21:2.50:0,2,24	0/0:14,0:16:26.17:0,26,535	1/1:23,2:24:3.64:130,4,0	0/1:24,0:27:53.60:54,0,91	1/1:18,0:19:3.40:34,3,0	0/1:15,1:18:3.66:47,0,4	0/1:64,0:63:64.29:107,0,64	1/1:7,5:12:3.01:60,3,0	0/0:7,5:12:5.65:0,6,34	0/0:19,5:24:2.97:0,3,23	0/0:7,0:10:3:0,3,25	1/1:12,0:20:15.41:184,15,0	0/1:14,6:20:7.87:207,0,8	0/1:6,0:10:7.92:36,0,8
chr10	99247282	.	TGTCTGTGTCTGTGTGCAC	T	65.56	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.968;DP=632;FS=0.000;HRun=0;HaplotypeScore=263.6549;InbreedingCoeff=0.7363;MQ=53.43;MQ0=28;MQRankSum=-2.900;QD=2.11;ReadPosRankSum=-1.062;VQSLOD=2.1968;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,6:31:3.27:143,3,0	0/0:11,0:10:24.08:0,24,1120	0/0:26,0:6:18.06:0,18,526	0/0:32,0:9:26.45:0,26,680	0/0:16,0:16:36.12:0,36,1703	0/0:24,0:24:49.25:0,49,1881	0/0:22,0:22:60.21:0,60,2580	0/0:24,0:22:65.75:0,66,2126	0/0:22,0:22:42.45:0,42,1948	0/0:19,0:18:47.02:0,47,1975	0/0:12,0:12:21.07:0,21,821	0/0:27,0:26:45.09:0,45,1669	0/0:17,0:17:42.13:0,42,1541	0/0:24,0:23:39.07:0,39,1331	0/0:21,0:21:27.38:0,27,1231	0/0:20,0:19:57.18:0,57,2893	0/0:27,0:25:57.18:0,57,2514	0/0:25,0:25:72.29:0,72,3003	0/0:16,0:16:47.73:0,48,1663	0/0:22,0:21:39.61:0,40,1563	0/0:52,0:49:99:0,102,4477	0/0:18,0:17:27.09:0,27,1163	0/0:19,0:19:36.09:0,36,1588	0/0:29,0:28:45.63:0,46,1922	0/0:24,0:24:54.19:0,54,2711	0/0:25,0:25:33.71:0,34,2351	0/0:20,0:18:38.68:0,39,1201	0/0:7,0:7:9.03:0,9,237
chr10	99248950	.	GCACACACA	G	2207.14	PASS	AB=0.797;AC=31;AF=0.674;AN=46;BaseQRankSum=4.411;DP=577;FS=24.534;HRun=0;HaplotypeScore=156.2178;InbreedingCoeff=0.3267;MQ=73.58;MQ0=13;MQRankSum=-6.095;QD=6.65;ReadPosRankSum=-1.178;VQSLOD=0.9975;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:48.16:0,48,1171	1/1:8,3:11:3.90:71,4,0	./.	./.	0/1:14,3:17:38.87:115,0,39	./.	1/1:21,5:28:8.95:165,9,0	0/0:21,0:19:0.46:0,0,1	./.	1/1:16,0:17:5.90:65,6,0	1/1:9,0:11:2.03:6,2,0	1/1:14,5:20:9.03:223,9,0	1/1:7,4:12:5.04:93,5,0	1/1:9,6:15:18.05:364,18,0	1/1:12,4:16:6.02:112,6,0	0/0:19,0:22:24.53:0,25,653	1/1:26,6:32:14.71:308,15,0	0/0:22,0:21:30.95:0,31,981	0/0:12,0:12:0.89:0,1,2	1/1:11,4:15:2.87:33,3,0	1/1:42,0:42:3:51,3,0	1/1:18,2:20:3.01:35,3,0	0/0:14,3:17:0:0,0,0	0/1:19,7:27:99:263,0,106	1/1:5,3:8:3.01:35,3,0	1/1:14,0:20:8.82:125,9,0	0/1:15,5:20:9.89:282,0,10	./.
chr10	99249665	.	T	TC	1225.66	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.191;DP=680;FS=7.951;HRun=4;HaplotypeScore=64.8919;InbreedingCoeff=0.9996;MQ=92.93;MQ0=1;MQRankSum=-4.829;QD=25.53;ReadPosRankSum=0.666;VQSLOD=2.2149;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:36:69.23:936,69,0	0/0:11,0:11:30.07:0,30,328	0/0:31,0:32:77.96:0,78,838	0/0:29,0:28:58.07:0,58,656	0/0:18,0:18:51.11:0,51,549	0/0:17,0:17:45.11:0,45,499	0/0:22,0:22:60.16:0,60,671	0/0:33,0:33:93.24:0,93,1033	0/0:25,0:25:66.17:0,66,737	0/0:24,0:24:69.17:0,69,751	0/0:22,0:22:63.16:0,63,703	0/0:16,0:16:48.14:0,48,543	0/0:21,0:21:63.10:0,63,675	0/0:29,0:29:87.06:0,87,948	0/0:30,0:30:81.23:0,81,917	0/0:28,0:28:78.20:0,78,867	0/0:28,0:28:78.20:0,78,865	1/1:2,10:12:33.04:411,33,0	0/0:26,0:26:74.80:0,75,775	0/0:23,0:23:66.17:0,66,737	0/0:17,0:17:51.10:0,51,556	0/0:25,0:25:75.14:0,75,805	0/0:31,0:31:84.18:0,84,918	0/0:29,0:29:78.19:0,78,870	0/0:33,0:33:93.23:0,93,1034	0/0:25,0:25:72.18:0,72,794	0/0:23,0:23:66.19:0,66,746	0/0:15,0:15:42.12:0,42,471
chr10	99250482	.	CTAAT	C	15686.59	PASS	AC=40;AF=0.769;AN=52;BaseQRankSum=4.906;DP=605;FS=7.638;HRun=0;HaplotypeScore=114.1451;InbreedingCoeff=0.9975;MQ=57.13;MQ0=2;MQRankSum=0.548;QD=34.48;ReadPosRankSum=2.105;VQSLOD=4.8451;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:29:57.17:0,57,944	1/1:2,10:12:30.10:509,30,0	./.	./.	1/1:7,21:28:51.17:866,51,0	1/1:4,12:16:30.10:509,30,0	1/1:9,7:15:24.08:407,24,0	0/0:34,0:34:75.26:0,75,1855	1/1:5,10:15:30.10:509,30,0	1/1:10,21:31:66.21:1090,66,0	1/1:8,19:27:45.15:764,45,0	1/1:4,13:17:39.13:662,39,0	1/1:5,20:25:54.18:916,54,0	1/1:4,10:14:24.08:407,24,0	1/1:7,28:35:66.18:1089,66,0	0/0:17,0:17:51.18:0,51,1273	1/1:8,19:27:48.16:814,48,0	0/0:7,0:25:23.43:0,23,826	1/1:4,13:17:39.12:629,39,0	1/1:4,18:22:48.16:814,48,0	1/1:3,17:20:47.29:813,47,0	1/1:9,18:27:48.16:814,48,0	1/1:3,16:19:45.11:763,45,0	1/1:4,29:33:69.24:1171,69,0	1/1:5,20:24:54.18:916,54,0	0/0:22,0:22:57.20:0,57,1404	1/1:3,26:29:72.25:1222,72,0	0/0:10,0:10:21.07:0,21,500
chr10	99251624	.	C	CA	5456.95	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=2.639;DP=607;FS=5.155;HRun=0;HaplotypeScore=90.4843;InbreedingCoeff=0.9939;MQ=85.46;MQ0=0;MQRankSum=-2.404;QD=41.66;ReadPosRankSum=-1.108;VQSLOD=4.7413;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,41:42:99:1772,111,0	0/0:6,0:6:18.02:0,18,214	0/0:18,0:18:44.23:0,44,563	0/0:20,0:20:49.01:0,49,599	0/0:24,0:24:72.24:0,72,1004	0/0:20,0:20:60.16:0,60,815	0/0:20,0:20:57.19:0,57,795	1/1:3,30:33:90.24:1324,90,0	0/0:19,0:19:57.19:0,57,795	0/0:21,0:21:60.17:0,60,817	0/0:13,0:13:39.13:0,39,545	0/0:22,0:22:66.22:0,66,919	0/0:13,0:13:39.12:0,39,528	0/0:25,0:25:75.21:0,75,1020	0/0:20,0:20:60.18:0,60,817	0/0:16,0:16:42.11:0,42,565	0/0:40,0:40:99:0,120,1669	1/1:1,26:27:75.26:1198,75,0	0/0:17,0:17:45.14:0,45,607	0/0:25,0:25:72.17:0,72,981	0/0:40,0:40:99:0,120,1635	0/0:15,0:15:42.06:0,42,542	0/0:12,0:12:36.12:0,36,502	0/0:23,0:23:69.19:0,69,941	0/0:20,0:20:60.16:0,60,815	1/1:1,21:22:24.40:936,24,0	0/0:27,0:27:81.23:0,81,1103	1/1:0,7:7:15.05:227,15,0
chr10	99253040	.	G	GT	21091.55	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.920;DP=566;FS=6.795;HRun=1;HaplotypeScore=176.0185;InbreedingCoeff=0.9982;MQ=76.55;MQ0=0;MQRankSum=-8.860;QD=42.35;ReadPosRankSum=2.227;VQSLOD=3.7797;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:66.23:1052,66,0	1/1:0,10:10:30.10:478,30,0	0/0:24,0:24:66.18:0,66,843	0/0:18,0:18:36.45:0,36,569	1/1:0,33:33:81.28:1291,81,0	1/1:0,14:14:36.12:574,36,0	1/1:1,18:19:48.16:765,48,0	1/1:1,20:21:63.19:980,63,0	1/1:0,22:22:66.23:1052,66,0	1/1:1,19:20:60.20:936,60,0	1/1:2,18:20:45.15:717,45,0	1/1:0,23:23:69.24:1099,69,0	1/1:0,19:19:51.17:813,51,0	1/1:1,29:30:81.28:1289,81,0	1/1:0,22:22:51.17:813,51,0	0/0:26,0:26:66.22:0,66,922	1/1:1,18:19:45.15:717,45,0	1/1:2,8:10:27.09:431,27,0	1/1:2,8:10:30.08:454,30,0	1/1:0,23:23:69.24:1100,69,0	1/1:0,15:15:24.08:383,24,0	1/1:0,18:18:51.17:814,51,0	1/1:0,19:19:48.16:765,48,0	1/1:1,16:17:29.13:436,29,0	1/1:0,15:15:45.15:718,45,0	1/1:0,30:30:90.31:1435,90,0	1/1:0,28:28:87.30:1382,87,0	1/1:0,13:13:39.11:597,39,0
chr10	99253623	.	CAG	C	2095.47	PASS	AB=0.523;AC=5;AF=0.089;AN=56;BaseQRankSum=4.254;DP=632;FS=4.036;HRun=0;HaplotypeScore=102.5218;InbreedingCoeff=0.7802;MQ=75.38;MQ0=0;MQRankSum=-2.027;QD=32.24;ReadPosRankSum=-1.362;VQSLOD=5.5295;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,2014	0/0:15,0:15:39.11:0,39,642	0/0:18,0:17:48.05:0,48,814	0/0:22,0:22:52.85:0,53,914	0/0:25,0:25:72.23:0,72,1280	0/0:31,0:31:90.31:0,90,1628	0/0:17,0:17:51.17:0,51,927	1/1:2,25:27:69.21:966,69,0	0/0:27,0:27:78.25:0,78,1333	0/0:26,0:26:69.23:0,69,1219	0/0:24,0:24:69.22:0,69,1181	0/0:21,0:21:60.19:0,60,1069	0/0:20,0:20:57.20:0,57,1037	0/0:23,0:23:63.22:0,63,1145	0/0:24,0:24:69.24:0,69,1239	0/0:29,0:29:84.26:0,84,1479	0/0:20,0:20:54.19:0,54,975	0/0:26,0:26:75.26:0,75,1348	0/0:30,0:30:75.20:0,75,1253	0/0:32,0:32:90.31:0,90,1641	0/0:19,0:19:51.16:0,51,896	0/0:17,0:17:48.15:0,48,843	0/0:14,0:14:42.14:0,42,769	0/0:15,0:15:45.14:0,45,787	0/0:17,0:17:48.16:0,48,874	0/1:2,21:23:43.63:788,0,44	0/0:17,0:17:51.17:0,51,907	1/1:3,12:15:32.77:472,33,0
chr10	99253751	.	C	CAA	1273.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.241;DP=662;FS=14.021;HRun=9;HaplotypeScore=139.5492;InbreedingCoeff=0.9932;MQ=62.79;MQ0=0;MQRankSum=-0.102;QD=35.36;ReadPosRankSum=2.264;VQSLOD=2.6070;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.20:0,84,894	0/0:16,0:16:39.09:0,39,415	0/0:11,0:11:30.06:0,30,308	0/0:9,0:8:21.05:0,21,223	0/0:36,0:36:90.18:0,90,947	0/0:35,0:35:99:0,99,1053	0/0:19,0:19:42.09:0,42,447	0/0:26,0:26:63.12:0,63,663	0/0:22,0:22:60.07:0,60,622	0/0:28,0:28:72.62:0,73,761	0/0:30,0:30:75.17:0,75,798	0/0:18,0:18:45.10:0,45,478	0/0:15,0:15:39.06:0,39,415	0/0:19,0:19:39.05:0,39,406	0/0:20,0:20:45.08:0,45,470	0/0:30,0:30:79.07:0,79,832	0/0:36,0:36:86.98:0,87,925	1/1:7,28:36:90.30:1368,90,0	0/0:30,0:30:69.05:0,69,734	0/0:28,0:28:66.05:0,66,702	0/0:19,0:19:51.06:0,51,533	0/0:17,0:17:48.12:0,48,510	0/0:24,0:24:64.03:0,64,664	0/0:20,0:20:48.03:0,48,510	0/0:22,0:22:60.14:0,60,638	0/0:33,0:33:87.19:0,87,926	0/0:23,0:23:60.14:0,60,638	0/0:8,0:8:24.06:0,24,253
chr10	99253914	.	A	AAAC	4522.87	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=-1.412;DP=651;FS=7.933;HRun=0;HaplotypeScore=214.2590;InbreedingCoeff=0.3415;MQ=72.85;MQ0=0;MQRankSum=-5.788;QD=16.04;ReadPosRankSum=-8.012;VQSLOD=1.5867;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1879	0/1:12,0:12:16.48:16,0,130	0/0:14,0:14:34.10:0,34,522	0/0:20,0:19:43.91:0,44,586	0/1:32,0:32:5.80:6,0,387	0/1:31,0:31:10.22:10,0,353	0/0:23,0:23:37.74:0,38,323	1/1:1,25:31:84.04:1442,84,0	0/1:17,0:17:1.38:1,0,190	0/1:31,0:31:12.32:12,0,286	0/0:29,0:29:19.63:0,20,357	0/0:18,0:18:51.93:0,52,288	0/0:20,0:20:55.18:0,55,332	0/0:21,0:21:34.41:0,34,313	0/1:23,0:23:77.58:78,0,227	0/0:25,0:25:74.59:0,75,1116	0/0:31,0:31:29.93:0,30,384	1/1:1,0:10:27.04:268,27,0	0/0:29,0:29:11.76:0,12,260	0/0:29,0:29:27.14:0,27,380	0/0:23,0:23:39.46:0,39,303	0/0:15,0:15:41.31:0,41,236	0/0:15,0:15:13.75:0,14,167	0/0:15,0:15:21.85:0,22,188	0/1:22,0:22:22.84:23,0,206	1/1:9,26:37:99:2058,102,0	0/1:26,0:26:28.06:28,0,286	1/1:2,6:9:27.09:580,27,0
chr10	99253970	.	C	CA	26073.65	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=11.450;DP=732;FS=4.405;HRun=0;HaplotypeScore=135.8939;InbreedingCoeff=0.9833;MQ=61.23;MQ0=0;MQRankSum=-1.696;QD=43.31;ReadPosRankSum=3.896;VQSLOD=4.0397;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,1711	1/1:0,13:13:33.11:527,33,0	0/0:24,0:19:54.17:0,54,740	0/0:34,0:32:83.33:0,83,1089	1/1:0,41:41:99:1886,120,0	1/1:0,27:27:75.26:1197,75,0	1/1:0,20:20:51.17:813,51,0	1/1:0,27:27:81.18:1215,81,0	1/1:0,23:23:66.23:1052,66,0	1/1:0,42:42:99:1939,123,0	1/1:1,34:35:90.31:1437,90,0	1/1:0,19:19:57.19:909,57,0	1/1:1,18:19:48.16:765,48,0	1/1:0,29:29:69.24:1094,69,0	1/1:0,30:30:84.22:1310,84,0	0/0:28,1:29:36.36:0,36,1069	1/1:0,33:34:96.27:1493,96,0	1/1:3,11:14:36.07:545,36,0	1/1:1,22:23:63.20:984,63,0	1/1:0,38:38:99:1639,105,0	1/1:0,24:24:63.21:1005,63,0	1/1:0,15:15:45.15:717,45,0	1/1:0,10:10:30.10:479,30,0	1/1:1,20:21:9.63:722,10,0	1/1:0,25:25:75.26:1198,75,0	1/1:0,34:34:99:1557,99,0	1/1:1,32:33:84.29:1331,84,0	1/1:2,4:6:18.03:258,18,0
chr10	99254072	.	GGAGA	G	23498.46	PASS	AB=0.533;AC=39;AF=0.696;AN=56;BaseQRankSum=16.509;DP=670;FS=9.413;HRun=0;HaplotypeScore=157.6780;InbreedingCoeff=0.9166;MQ=57.27;MQ0=0;MQRankSum=-7.145;QD=50.32;ReadPosRankSum=3.190;VQSLOD=5.3843;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:93.32:0,93,2502	1/1:1,14:15:39.13:756,39,0	0/0:25,0:23:54.21:0,54,1485	0/0:26,0:24:68.52:0,69,1602	1/1:1,30:31:78.23:1473,78,0	1/1:1,29:30:78.27:1502,78,0	1/1:2,21:23:54.19:1041,54,0	0/0:20,0:20:54.19:0,54,1442	1/1:0,14:14:33.11:640,33,0	1/1:1,40:41:99:2320,120,0	1/1:1,25:26:78.22:1467,78,0	1/1:2,18:20:57.20:1105,57,0	1/1:1,21:22:60.21:1158,60,0	1/1:1,28:29:81.28:1558,81,0	1/1:4,22:26:63.22:1221,63,0	0/0:25,0:25:72.25:0,72,1906	1/1:2,12:14:27.09:523,27,0	0/0:22,0:22:66.14:0,66,1653	1/1:1,13:14:39.12:715,39,0	1/1:2,25:27:72:1271,72,0	1/1:2,17:19:51.17:988,51,0	1/1:0,21:21:57.20:1100,57,0	1/1:0,19:19:45.11:866,45,0	0/1:3,21:24:18.09:1068,0,18	1/1:1,26:27:72.25:1395,72,0	0/0:33,1:34:41.22:0,41,2517	1/1:1,24:25:69.24:1333,69,0	0/0:19,0:19:54.19:0,54,1465
chr10	99256017	.	TGGG	T	7208.04	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-4.748;DP=414;FS=7.067;HRun=13;HaplotypeScore=88.7060;InbreedingCoeff=0.8739;MQ=72.76;MQ0=0;MQRankSum=-1.444;QD=19.97;ReadPosRankSum=2.781;VQSLOD=3.7970;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,13:22:35.96:400,36,0	1/1:3,3:6:6:73,6,0	0/0:26,0:19:26.12:0,26,332	0/0:20,0:9:14.52:0,15,143	1/1:3,5:8:15:165,15,0	1/1:4,9:14:20.99:237,21,0	1/1:4,17:22:41.98:474,42,0	1/1:7,0:22:38.17:232,38,0	1/1:3,15:18:42.11:511,42,0	1/1:5,12:18:35.98:418,36,0	1/1:1,6:7:15.03:179,15,0	1/1:1,9:11:27.02:310,27,0	1/1:0,5:5:9.03:109,9,0	1/1:7,11:18:23.99:292,24,0	1/1:4,11:15:36.07:435,36,0	0/0:2,0:7:5.98:0,6,46	1/1:5,24:31:58.43:708,58,0	1/1:3,0:18:38.23:232,38,0	1/1:6,5:12:17.95:199,18,0	1/1:3,7:13:27.76:272,28,0	1/1:7,11:18:21.01:239,21,0	1/1:2,11:13:27.55:328,28,0	1/1:4,6:10:20.99:235,21,0	1/1:0,8:8:21.06:255,21,0	1/1:7,7:14:24:274,24,0	1/1:3,0:21:51.20:306,51,0	1/1:4,5:10:17.96:199,18,0	1/1:0,0:7:20.59:125,21,0
chr10	99256028	.	GGGT	G	1685.67	PASS	AB=0.976;AC=25;AF=0.446;AN=56;BaseQRankSum=3.026;DP=384;FS=2.121;HRun=0;HaplotypeScore=94.5924;InbreedingCoeff=-0.1781;MQ=69.38;MQ0=0;MQRankSum=-1.494;QD=6.22;ReadPosRankSum=7.572;VQSLOD=1.7423;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:19,1:20:71:119,0,71	0/1:4,0:4:12.61:13,0,13	0/0:18,0:13:27.95:0,28,379	0/0:17,0:6:14.15:0,14,119	0/1:7,0:7:19.63:70,0,20	0/1:12,0:12:31.81:44,0,32	0/1:20,0:20:24.32:135,0,24	0/0:22,0:22:23.56:0,24,126	1/1:15,0:15:38.76:186,39,0	0/1:18,0:18:99:114,0,103	0/1:10,0:10:51.94:52,0,56	0/1:12,1:13:17.60:110,0,18	1/1:5,0:5:7.69:28,8,0	0/1:12,0:12:2.26:72,0,2	0/1:15,1:16:32.52:139,0,33	0/0:5,0:5:6.02:0,6,63	0/1:32,0:32:73.42:152,0,73	0/0:20,0:20:33.86:0,34,158	0/1:13,0:13:31.65:32,0,150	0/1:12,0:12:31.71:60,0,32	0/1:13,0:13:4.44:57,0,4	1/1:11,0:11:25.03:117,25,0	0/1:9,1:10:23.40:91,0,23	0/1:9,0:9:2.19:54,0,2	0/1:10,2:12:52.64:102,0,53	0/0:22,0:22:14.80:0,15,132	1/1:6,1:6:9.26:111,9,0	0/0:9,0:9:14.06:0,14,70
chr10	99257103	.	T	TG	313.56	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.424;DP=565;FS=4.795;HRun=0;HaplotypeScore=97.7264;InbreedingCoeff=0.6927;MQ=64.05;MQ0=16;MQRankSum=-0.406;QD=20.90;ReadPosRankSum=-0.829;VQSLOD=5.1421;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:90.27:0,90,1193	0/0:4,0:4:11.25:0,11,133	0/0:44,0:18:5.55:0,6,246	0/0:29,0:13:6.39:0,6,230	0/0:23,0:22:37.06:0,37,519	0/0:17,0:17:35.81:0,36,461	0/0:18,0:17:36.02:0,36,444	0/0:26,0:25:69.13:0,69,868	0/0:20,0:19:26.78:0,27,321	0/0:17,0:17:41.16:0,41,520	0/0:19,0:19:47.91:0,48,594	0/0:18,0:18:42.14:0,42,582	0/0:16,0:16:27.07:0,27,357	0/0:13,0:13:24.07:0,24,313	0/0:20,0:20:45.10:0,45,593	0/0:12,0:12:36.12:0,36,503	0/0:24,0:24:50.70:0,51,607	1/1:5,10:13:28.95:408,29,0	0/0:27,0:27:75.04:0,75,887	0/0:20,0:19:45:0,45,517	0/0:14,0:13:33.06:0,33,406	0/0:16,0:14:34.83:0,35,448	0/0:26,0:26:66.21:0,66,890	0/0:19,0:19:41.96:0,42,556	0/0:18,0:18:36.22:0,36,535	0/0:31,0:28:81.13:0,81,1000	0/0:17,0:15:24.05:0,24,294	0/0:1,0:1:3.01:0,3,42
chr10	99257108	.	G	GTTT	9521.72	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-2.705;DP=573;FS=0.000;HRun=11;HaplotypeScore=84.4392;InbreedingCoeff=0.7853;MQ=62.81;MQ0=16;MQRankSum=1.428;QD=19.67;ReadPosRankSum=0.915;VQSLOD=3.2673;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,2:42:78.16:633,78,0	1/1:1,2:4:11.95:154,12,0	0/0:46,0:18:2.44:0,2,223	0/0:29,0:14:5.54:0,6,41	1/1:5,17:22:38.88:595,39,0	1/1:3,12:16:30.10:564,30,0	1/1:7,12:19:21.05:334,21,0	1/1:9,0:26:43.19:422,43,0	1/1:4,17:21:17.89:296,18,0	1/1:5,11:16:30.10:535,30,0	1/1:9,11:19:27.09:452,27,0	1/1:8,0:17:23.96:209,24,0	1/1:4,0:15:11.95:91,12,0	1/1:3,0:12:13.99:97,14,0	1/1:8,14:22:33.11:617,33,0	0/0:12,0:13:30.05:0,30,350	1/1:4,17:24:31.84:577,32,0	1/1:15,0:13:16.21:198,16,0	1/1:15,12:27:45.09:671,45,0	1/1:3,14:19:39.05:593,39,0	1/1:8,4:12:21.01:292,21,0	1/1:1,1:12:25.04:196,25,0	1/1:8,0:28:37.04:267,37,0	1/1:1,1:18:37.11:308,37,0	1/1:2,9:17:33.07:535,33,0	1/1:16,1:28:57.60:477,58,0	1/1:3,13:17:22.32:384,22,0	1/1:2,0:2:2.99:23,3,0
chr10	99257112	.	T	TG	39.73	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.467;DP=566;FS=0.803;HRun=0;HaplotypeScore=96.1108;InbreedingCoeff=0.6668;MQ=61.81;MQ0=16;MQRankSum=-2.005;QD=2.84;ReadPosRankSum=1.267;VQSLOD=3.1603;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:43:60.22:0,60,419	0/0:4,0:4:7.86:0,8,56	0/0:50,0:21:38.12:0,38,295	0/0:31,0:12:16.50:0,16,156	0/0:23,0:22:33.74:0,34,196	0/0:17,0:17:34.88:0,35,213	0/0:17,0:16:28.88:0,29,178	0/0:26,0:25:54.36:0,54,374	0/0:23,0:22:18.55:0,19,158	0/0:15,0:15:32.10:0,32,184	0/0:18,0:17:39.35:0,39,278	0/0:14,0:14:29.29:0,29,191	0/0:15,0:15:21.69:0,22,159	0/0:10,0:10:4.22:0,4,48	0/0:22,0:22:49.43:0,49,332	0/0:12,0:12:36.07:0,36,465	0/0:24,0:24:37.72:0,38,238	1/1:8,6:12:9.17:123,9,0	0/0:24,0:23:60.28:0,60,362	0/0:19,0:18:30.60:0,31,165	0/0:13,0:12:20.20:0,20,122	0/0:14,0:12:7.02:0,7,96	0/0:28,0:28:53.35:0,53,380	0/0:19,0:19:35.62:0,36,241	0/0:17,0:17:33.33:0,33,199	0/0:31,0:28:58.13:0,58,432	0/0:19,0:17:16.10:0,16,122	0/0:4,0:4:11.96:0,12,97
chr10	99257115	.	T	TTG	1707.27	PASS	AB=0.997;AC=23;AF=0.411;AN=56;BaseQRankSum=2.860;DP=563;FS=2.424;HRun=0;HaplotypeScore=98.7486;InbreedingCoeff=-0.1522;MQ=61.45;MQ0=15;MQRankSum=-3.643;QD=4.61;ReadPosRankSum=4.373;VQSLOD=2.5828;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:43,0:43:35:350,35,0	0/1:4,0:4:0.32:25,0,0	0/0:46,0:19:33.94:0,34,391	0/0:31,0:12:16.23:0,16,152	0/1:24,0:23:29.66:30,0,82	0/0:18,0:18:11.05:0,11,59	0/1:17,0:16:0.24:0,0,81	0/1:25,0:24:73.28:139,0,73	0/0:23,0:22:0.20:0,0,67	0/1:16,0:17:26.15:26,0,68	0/1:18,0:17:2.19:2,0,100	0/1:14,0:14:28.01:95,0,28	0/1:16,0:16:56.50:59,0,56	1/1:10,0:10:12.61:78,13,0	0/0:19,0:19:13.20:0,13,122	0/0:11,0:11:33.07:0,33,454	0/0:26,0:26:1.34:0,1,99	1/1:10,4:13:31.60:380,32,0	0/1:24,0:23:34.04:34,0,128	0/1:18,0:17:6.04:66,0,6	0/1:13,0:12:17.25:26,0,17	0/1:15,0:13:5.40:108,0,5	0/1:27,0:27:99:105,0,138	0/1:21,0:21:3.60:138,0,4	0/1:17,0:17:18.38:31,0,18	0/1:28,0:25:63.47:171,0,63	0/0:19,0:17:9.56:0,10,60	0/1:4,0:4:4.56:5,0,66
chr10	99257125	.	G	GT	168.95	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.829;DP=520;FS=0.000;HRun=3;HaplotypeScore=87.0956;InbreedingCoeff=0.9002;MQ=59.52;MQ0=12;MQRankSum=-3.884;QD=11.26;ReadPosRankSum=-0.052;VQSLOD=1.4247;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:93.28:0,93,1108	0/0:6,0:6:18.03:0,18,202	0/0:45,1:22:10.77:0,11,397	0/0:30,0:13:21.26:0,21,217	0/0:23,0:23:56.98:0,57,637	0/0:16,0:16:36.07:0,36,409	0/0:17,0:16:32.99:0,33,375	0/0:18,0:17:42.09:0,42,498	0/0:16,0:15:27.08:0,27,319	0/0:13,0:14:29.93:0,30,328	0/0:13,0:12:29.69:0,30,349	0/0:13,0:13:21.07:0,21,301	0/0:11,0:11:21.06:0,21,252	0/0:11,0:11:19.27:0,19,203	0/0:14,0:14:40.63:0,41,442	0/0:14,0:14:36.11:0,36,432	0/0:24,0:24:29.55:0,30,548	1/1:7,8:13:23.95:262,24,0	0/0:16,0:15:30.80:0,31,347	0/0:22,0:21:48.15:0,48,571	0/0:14,0:13:21.06:0,21,252	0/0:13,0:12:27.08:0,27,312	0/0:22,0:22:50.92:0,51,585	0/0:25,0:25:61.37:0,61,702	0/0:19,0:19:44.15:0,44,512	0/0:28,0:25:44.66:0,45,705	0/0:14,0:13:24.06:0,24,269	0/0:4,0:4:12.03:0,12,136
chr10	99257249	.	A	ATG	14338.31	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=0.724;DP=539;FS=8.479;HRun=0;HaplotypeScore=93.8851;InbreedingCoeff=0.9304;MQ=64.52;MQ0=2;MQRankSum=-1.315;QD=29.32;ReadPosRankSum=4.241;VQSLOD=6.6312;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:27:54.04:485,54,0	1/1:0,13:13:33.11:557,33,0	0/0:23,0:17:17.31:0,17,332	0/0:16,0:11:20.74:0,21,202	1/1:2,19:21:42.14:708,42,0	1/1:2,21:23:51.17:844,51,0	1/1:3,16:19:39.13:657,39,0	1/1:10,0:32:73.57:675,74,0	1/1:4,10:13:21.07:354,21,0	1/1:7,24:32:75.16:1130,75,0	1/1:6,10:17:24.08:383,24,0	1/1:2,13:15:27.09:455,27,0	1/1:5,14:20:30.10:506,30,0	1/1:2,13:15:33.11:548,33,0	1/1:1,21:22:45.15:758,45,0	0/0:10,0:10:27.08:0,27,342	1/1:5,22:27:54.18:910,54,0	1/1:1,0:6:3:27,3,0	1/1:10,12:23:39.11:580,39,0	1/1:5,16:21:36.12:604,36,0	1/1:3,14:17:27.09:455,27,0	1/1:1,15:16:45.15:756,45,0	1/1:4,10:14:30.10:485,30,0	1/1:2,17:19:36.12:608,36,0	1/1:4,9:13:21.07:352,21,0	1/1:9,1:25:54.07:545,54,0	1/1:1,20:23:42.14:708,42,0	1/1:5,0:12:27.02:247,27,0
chr10	99257543	.	G	GT	602.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.738;DP=685;FS=13.359;HRun=4;HaplotypeScore=70.9398;InbreedingCoeff=0.9695;MQ=84.74;MQ0=0;MQRankSum=-3.595;QD=33.48;ReadPosRankSum=0.085;VQSLOD=2.9609;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,1521	0/0:14,0:14:42.12:0,42,476	0/0:29,0:29:81.10:0,81,836	0/0:13,0:13:30.04:0,30,308	0/0:21,0:21:60.14:0,60,661	0/0:20,0:20:57.16:0,57,646	0/0:18,0:18:48.08:0,48,513	0/0:24,0:24:60.16:0,60,673	0/0:27,0:27:81.18:0,81,888	0/0:37,0:37:96.27:0,96,1089	0/0:14,0:13:39.11:0,39,442	0/0:31,0:31:87.23:0,87,977	0/0:22,0:22:60.12:0,60,655	0/0:22,0:22:60.17:0,60,680	0/0:27,0:27:78.22:0,78,881	0/0:23,0:23:69.20:0,69,783	0/0:50,0:50:99:0,144,1619	1/1:2,16:18:51.17:697,51,0	0/0:21,0:21:63.18:0,63,714	0/0:28,0:27:78.22:0,78,884	0/0:22,0:22:63.18:0,63,714	0/0:29,0:29:72.20:0,72,815	0/0:29,0:29:78.20:0,78,871	0/0:34,0:34:99:0,102,1145	0/0:11,0:11:33.09:0,33,374	0/0:25,0:25:72.21:0,72,817	0/0:27,0:27:81.23:0,81,919	0/0:4,0:4:12.03:0,12,136
chr10	99257580	.	G	GC	382.33	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.663;DP=730;FS=9.480;HRun=0;HaplotypeScore=92.3546;InbreedingCoeff=0.9983;MQ=83.45;MQ0=0;MQRankSum=-3.181;QD=34.76;ReadPosRankSum=1.630;VQSLOD=2.6396;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,1762	0/0:20,0:20:60.17:0,60,817	0/0:23,0:23:69.21:0,69,933	0/0:21,0:21:57.15:0,57,751	0/0:18,0:18:51.17:0,51,712	0/0:17,0:17:51.16:0,51,696	0/0:16,0:16:48.14:0,48,653	0/0:35,0:35:99:0,105,1417	0/0:36,0:36:99:0,108,1492	0/0:32,0:32:93.31:0,93,1300	0/0:17,0:17:48.15:0,48,654	0/0:35,0:35:99:0,105,1468	0/0:17,0:17:51.17:0,51,713	0/0:29,0:29:81.25:0,81,1112	0/0:28,0:28:81.25:0,81,1115	0/0:24,0:24:72.24:0,72,1006	0/0:44,0:44:99:0,129,1764	1/1:2,9:11:30.10:477,30,0	0/0:21,0:21:63.21:0,63,881	0/0:32,0:31:90.29:0,90,1242	0/0:28,0:28:81.27:0,81,1131	0/0:31,0:31:87.28:0,87,1200	0/0:26,0:26:72.22:0,72,986	0/0:37,0:37:99:0,111,1550	0/0:12,0:12:36.12:0,36,503	0/0:31,0:31:93.31:0,93,1298	0/0:35,0:34:99:0,105,1467	0/0:9,0:9:27.09:0,27,377
chr10	99258731	.	T	TACAC	1570.25	PASS	AB=1.000;AC=39;AF=0.750;AN=52;BaseQRankSum=1.294;DP=588;FS=9.585;HRun=0;HaplotypeScore=153.6681;InbreedingCoeff=0.4945;MQ=73.63;MQ0=11;MQRankSum=-0.039;QD=3.98;ReadPosRankSum=-0.133;VQSLOD=1.7098;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:6.06:0,6,57	1/1:15,0:15:5.99:80,6,0	./.	./.	1/1:24,0:22:8.99:116,9,0	1/1:15,0:15:6:76,6,0	1/1:22,0:21:5.99:69,6,0	1/1:18,0:17:2.13:5,2,0	1/1:14,0:14:2.85:24,3,0	1/1:17,0:17:9.52:58,10,0	1/1:18,0:18:3.01:46,3,0	1/1:14,0:14:3.01:49,3,0	1/1:13,0:13:5.87:35,6,0	1/1:21,0:21:12.02:137,12,0	1/1:17,0:16:9.01:126,9,0	0/0:16,0:16:14.76:0,15,203	1/1:28,0:27:3.01:31,3,0	0/0:14,0:17:6.01:0,6,56	1/1:27,0:27:3.48:45,3,0	0/1:19,0:18:0:0,0,0	0/0:14,0:14:0:0,0,0	1/1:14,0:14:3.01:65,3,0	0/0:15,0:14:0:0,0,0	1/1:23,0:23:11.98:129,12,0	1/1:28,0:26:14.95:190,15,0	1/1:17,8:23:16.56:421,17,0	1/1:23,0:22:2.70:7,3,0	0/0:11,0:11:12.43:0,12,165
chr10	99258759	.	C	CAG	1197.30	PASS	AB=0.981;AC=19;AF=0.339;AN=56;BaseQRankSum=2.901;DP=608;FS=0.960;HRun=0;HaplotypeScore=119.4958;InbreedingCoeff=-0.5130;MQ=48.40;MQ0=17;MQRankSum=1.753;QD=3.18;ReadPosRankSum=0.517;VQSLOD=2.0025;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:93.10:0,93,786	0/1:16,0:16:56.97:135,0,57	0/0:18,0:4:8.95:0,9,69	0/0:22,0:9:26.88:0,27,235	0/1:21,0:19:60.11:104,0,60	0/1:15,0:15:39.52:40,0,95	0/0:32,0:31:0.97:0,1,372	0/0:21,0:18:53.44:0,53,402	0/1:15,0:15:70.84:105,0,71	0/1:26,0:25:99:197,0,217	0/1:8,9:18:27.17:27,0,107	0/1:14,0:14:9.06:9,0,76	0/1:19,0:19:16.66:17,0,154	0/1:23,0:22:47.80:48,0,64	0/1:17,0:16:75.39:187,0,75	0/0:24,0:24:65.90:0,66,632	0/1:23,0:22:99:116,0,100	0/0:22,0:21:56.65:0,57,436	0/1:27,0:27:67.41:67,0,187	0/1:15,0:14:32.69:33,0,54	0/1:23,0:23:5.24:5,0,98	0/1:18,0:17:17.85:18,0,124	0/1:17,0:16:53.98:54,0,76	0/1:23,0:21:6.18:6,0,45	0/1:26,0:24:99:101,0,139	0/0:30,0:28:25.24:0,25,467	0/1:21,0:20:83.71:84,0,111	0/0:14,0:13:38.79:0,39,352
chr10	99258943	.	GTA	G	18545.01	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=3.201;DP=555;FS=0.000;HRun=0;HaplotypeScore=69.2393;InbreedingCoeff=0.9830;MQ=91.52;MQ0=0;MQRankSum=-9.880;QD=38.00;ReadPosRankSum=5.615;VQSLOD=6.9015;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:81.27:1193,81,0	1/1:0,5:5:15.05:221,15,0	0/0:25,0:25:69.24:0,69,1246	0/0:21,0:21:57.18:0,57,1012	1/1:1,21:22:60.20:883,60,0	1/1:0,19:19:48.16:707,48,0	1/1:0,22:23:57.19:839,57,0	1/1:0,31:31:87.25:1204,87,0	1/1:0,24:24:69.23:1016,69,0	1/1:1,13:14:39.13:574,39,0	1/1:1,12:13:33.11:486,33,0	1/1:0,26:26:66.22:972,66,0	1/1:0,17:17:39.13:573,39,0	1/1:0,8:8:24.08:353,24,0	1/1:1,20:21:51.17:750,51,0	0/0:20,1:21:16.02:0,16,1024	1/1:0,29:29:75.25:1104,75,0	1/1:0,18:18:48.16:707,48,0	1/1:0,27:27:81.24:1134,81,0	1/1:0,7:7:18.06:265,18,0	1/1:1,36:37:90.30:1325,90,0	1/1:0,15:15:39.13:574,39,0	1/1:0,17:17:39.13:574,39,0	1/1:0,25:25:57.19:839,57,0	1/1:1,13:14:30.10:442,30,0	1/1:0,23:23:66.22:970,66,0	1/1:0,15:15:39.13:574,39,0	1/1:0,7:7:18.06:265,18,0
chr10	99259457	.	AC	A	16798.17	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=14.014;DP=671;FS=12.641;HRun=1;HaplotypeScore=64.7600;InbreedingCoeff=0.9994;MQ=88.19;MQ0=0;MQRankSum=-4.739;QD=38.09;ReadPosRankSum=3.036;VQSLOD=4.5541;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,157,2468	1/1:1,9:10:30.10:417,30,0	0/0:23,0:23:69.23:0,69,1086	0/0:25,0:25:70.79:0,71,1092	1/1:0,24:24:66.22:922,66,0	1/1:0,17:17:45.15:629,45,0	1/1:0,22:22:60.20:839,60,0	0/0:31,0:31:93.31:0,93,1463	1/1:0,26:26:72.24:1006,72,0	1/1:0,20:20:57.19:797,57,0	1/1:0,11:11:27.08:377,27,0	1/1:0,27:27:75.25:1049,75,0	1/1:0,21:21:57.19:796,57,0	1/1:0,20:20:60.20:837,60,0	1/1:0,30:30:75.25:1049,75,0	0/0:31,2:32:54.36:0,54,1445	1/1:0,27:27:75.25:1049,75,0	0/0:14,0:14:36.12:0,36,575	1/1:0,28:28:84.21:1119,84,0	1/1:0,19:19:57.19:797,57,0	1/1:0,38:38:99:1427,102,0	1/1:0,18:18:39.13:545,39,0	1/1:0,14:14:42.14:584,42,0	1/1:0,27:27:69.23:965,69,0	1/1:0,16:16:45.15:629,45,0	0/0:34,2:36:24.44:0,24,1547	1/1:0,26:26:69.23:965,69,0	0/0:14,0:14:42.12:0,42,646
chr10	99260168	.	TTA	T	20184.68	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=10.912;DP=670;FS=0.324;HRun=0;HaplotypeScore=85.2403;InbreedingCoeff=0.9983;MQ=83.19;MQ0=2;MQRankSum=-2.302;QD=41.11;ReadPosRankSum=6.341;VQSLOD=6.2688;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.28:0,81,1563	1/1:0,13:13:36.12:551,36,0	0/0:24,0:24:68.26:0,68,1234	0/0:17,0:17:34.69:0,35,812	1/1:0,34:34:99:1469,102,0	1/1:0,22:22:60.20:919,60,0	1/1:0,21:21:51.17:781,51,0	0/0:36,0:36:99:0,108,2007	1/1:0,20:20:54.18:827,54,0	1/1:0,26:26:75.25:1149,75,0	1/1:0,29:28:78.26:1185,78,0	1/1:0,22:22:60.20:919,60,0	1/1:0,23:23:63.21:964,63,0	1/1:0,20:20:48.16:735,48,0	1/1:1,22:23:60.20:919,60,0	0/0:31,0:31:93.29:0,93,1721	1/1:0,22:22:57.19:873,57,0	0/0:10,0:10:30.10:0,30,566	1/1:2,21:23:63.20:942,63,0	1/1:0,48:47:99:2076,138,0	1/1:0,9:9:18.06:276,18,0	1/1:0,26:26:72.24:1102,72,0	1/1:0,28:28:75.25:1148,75,0	1/1:0,10:10:30.10:459,30,0	1/1:0,40:40:99:1516,99,0	0/0:25,0:25:72.23:0,72,1357	1/1:0,32:32:90.31:1378,90,0	0/0:9,0:9:27.09:0,27,521
chr10	99262089	.	AGTTTAACTC	A	25471.23	PASS	AB=0.957;AC=45;AF=0.804;AN=56;BaseQRankSum=13.514;DP=580;FS=14.646;HRun=0;HaplotypeScore=183.1081;InbreedingCoeff=0.8837;MQ=78.24;MQ0=0;MQRankSum=-15.234;QD=54.66;ReadPosRankSum=2.846;VQSLOD=3.3290;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:27:57.20:1628,57,0	1/1:4,16:20:48.16:1415,48,0	0/0:30,0:30:69.24:0,69,2665	0/0:19,0:19:54.19:0,54,2292	1/1:5,23:28:48.16:1215,48,0	1/1:3,11:14:33.11:982,33,0	1/1:6,13:19:39.13:1139,39,0	0/0:28,0:28:72.25:0,72,3367	1/1:4,26:30:68.95:2032,69,0	1/1:3,22:24:63.20:1730,63,0	1/1:4,10:13:27.09:764,27,0	1/1:3,18:21:42.14:1252,42,0	1/1:6,11:17:27.09:804,27,0	1/1:3,11:14:33.11:975,33,0	1/1:3,17:20:36.12:1073,36,0	0/0:27,0:27:78.27:0,78,3699	1/1:3,17:20:42.14:1252,42,0	1/1:6,16:22:40.02:1153,40,0	1/1:5,8:12:21.07:626,21,0	1/1:4,15:18:36.12:992,36,0	1/1:4,9:13:21.07:517,21,0	1/1:6,23:29:60.21:1645,60,0	1/1:4,12:15:27.56:731,28,0	1/1:5,17:22:24.08:716,24,0	1/1:3,20:22:57.19:1547,57,0	0/1:21,1:22:29.29:29,0,2641	1/1:1,17:18:42.14:1253,42,0	0/0:10,0:10:24.08:0,24,1145
chr10	99262090	.	GTTTAACTC	G	12940.72	PASS	AB=0.979;AC=24;AF=0.429;AN=56;BaseQRankSum=17.787;DP=573;FS=6.576;HRun=0;HaplotypeScore=211.7310;InbreedingCoeff=-0.4040;MQ=76.37;MQ0=0;MQRankSum=-14.564;QD=29.34;ReadPosRankSum=6.791;VQSLOD=3.4733;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:41.13:826,0,41	0/1:20,0:20:68.17:733,0,68	0/0:28,0:28:77.39:0,77,2974	0/0:18,0:18:54.19:0,54,2384	0/1:28,0:28:42.80:550,0,43	0/1:14,0:14:66.76:513,0,67	0/1:18,0:18:98.59:582,0,99	0/0:28,0:28:81.27:0,81,3431	0/1:29,1:30:32.64:1064,0,33	0/1:25,0:24:19.27:858,0,19	0/1:11,3:13:5.71:392,0,6	0/1:21,0:21:26.75:660,0,27	0/1:17,0:17:99:410,0,147	0/1:13,0:14:19.48:513,0,19	0/1:20,0:20:66.30:562,0,66	0/0:27,0:27:81.28:0,81,3650	0/1:20,0:19:5.15:660,0,5	0/1:21,0:21:31.61:596,0,32	0/1:13,0:12:99:321,0,106	0/1:19,0:18:91.68:476,0,92	0/1:13,0:13:83.69:223,0,84	0/1:26,3:29:73.73:812,0,74	0/1:15,1:15:14.82:351,0,15	0/1:22,0:22:6.30:378,0,6	1/1:22,1:22:16.78:775,17,0	0/0:21,0:21:12.55:0,13,2605	1/1:18,0:18:22.27:686,22,0	0/0:10,0:10:30.05:0,30,1152
chr10	99262278	.	TTCTCTGAG	T	21509.45	PASS	AB=0.962;AC=43;AF=0.768;AN=56;BaseQRankSum=16.474;DP=524;FS=22.861;HRun=0;HaplotypeScore=205.2313;InbreedingCoeff=0.8888;MQ=90.48;MQ0=0;MQRankSum=-16.708;QD=58.45;ReadPosRankSum=5.706;VQSLOD=3.1720;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:42.14:1143,42,0	1/1:2,8:10:24.04:614,24,0	0/0:25,0:25:69.24:0,69,2866	0/0:30,0:30:78.27:0,78,2741	1/1:6,22:27:57.19:1514,57,0	1/1:0,10:10:24.08:679,24,0	1/1:5,13:18:42.14:1188,42,0	0/0:32,0:32:90.31:0,90,3574	1/1:4,10:14:30.10:849,30,0	1/1:4,17:19:45.15:1256,45,0	1/1:1,12:13:30.10:799,30,0	1/1:2,14:15:30.10:849,30,0	1/1:2,10:12:30.10:849,30,0	1/1:1,20:21:60.21:1698,60,0	1/1:1,17:18:51.17:1443,51,0	0/1:24,1:25:12.64:13,0,2750	1/1:2,9:11:18.06:479,18,0	0/0:22,0:22:51.17:0,51,2171	1/1:2,17:19:45.13:1178,45,0	1/1:0,21:21:60.21:1698,60,0	1/1:4,7:11:15.52:425,16,0	1/1:2,12:11:27.09:764,27,0	1/1:1,16:17:45.15:1272,45,0	1/1:0,7:7:8.82:254,9,0	1/1:1,21:22:63.22:1782,63,0	0/0:34,0:34:99:0,99,4330	1/1:2,14:16:27.09:764,27,0	0/0:13,0:13:39.13:0,39,1548
chr10	99262558	.	TCTGA	T	14128.36	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-1.087;DP=636;FS=1.521;HRun=0;HaplotypeScore=136.3005;InbreedingCoeff=0.9328;MQ=81.91;MQ0=31;MQRankSum=0.617;QD=36.60;ReadPosRankSum=8.305;VQSLOD=4.6645;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:54.18:944,54,0	1/1:1,6:7:6.02:105,6,0	0/0:91,0:36:57.85:0,58,714	0/0:119,0:67:85.70:0,86,953	1/1:17,0:17:30.10:524,30,0	1/1:16,0:16:30.10:524,30,0	1/1:15,0:15:30.10:524,30,0	1/1:16,0:16:39.12:635,39,0	1/1:18,0:18:42.14:734,42,0	1/1:20,0:20:56.54:924,57,0	1/1:7,0:7:18.06:315,18,0	1/1:11,0:11:24.08:420,24,0	1/1:20,0:20:48.16:839,48,0	1/1:13,0:13:33.11:577,33,0	1/1:18,0:18:42.14:734,42,0	0/0:39,0:39:99:0,102,1520	1/1:21,0:21:42.14:733,42,0	1/1:13,0:13:24.08:419,24,0	1/1:12,0:12:21.04:337,21,0	1/1:8,0:8:18.06:315,18,0	1/1:22,1:22:39.13:682,39,0	1/1:5,0:5:9.03:157,9,0	1/1:13,0:13:18.06:315,18,0	1/1:21,0:21:36.12:630,36,0	1/1:14,0:14:27.09:472,27,0	1/1:23,0:23:63.19:1065,63,0	1/1:16,0:17:39.13:681,39,0	1/1:10,0:10:30.10:524,30,0
chr10	99262562	.	A	ACT	14739.38	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-1.294;DP=607;FS=3.391;HRun=0;HaplotypeScore=111.9229;InbreedingCoeff=0.9329;MQ=81.80;MQ0=33;MQRankSum=0.442;QD=40.94;ReadPosRankSum=6.820;VQSLOD=6.6378;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:25:54.18:946,54,0	1/1:6,0:6:6.02:105,6,0	0/0:90,0:33:51:0,51,678	0/0:116,0:64:99:0,100,1052	1/1:2,14:16:30.10:530,30,0	1/1:0,13:13:30.10:535,30,0	1/1:2,13:14:33.11:581,33,0	1/1:0,13:13:39.12:649,39,0	1/1:0,17:17:42.14:767,42,0	1/1:0,19:19:56.21:961,56,0	1/1:1,6:7:18.06:335,18,0	1/1:0,9:9:24.08:432,24,0	1/1:1,18:19:48.16:874,48,0	1/1:0,12:12:33.11:614,33,0	1/1:1,17:18:42.14:767,42,0	0/0:38,0:38:99:0,108,1567	1/1:2,18:20:42.14:773,42,0	1/1:0,11:11:24.08:445,24,0	1/1:0,7:7:21.04:357,21,0	1/1:2,6:8:18.06:335,18,0	1/1:2,21:22:39.13:714,39,0	1/1:1,5:5:9.03:167,9,0	1/1:2,10:12:18.06:335,18,0	1/1:0,20:20:35.81:642,36,0	1/1:0,14:14:27.09:489,27,0	1/1:1,21:22:63.19:1113,63,0	1/1:0,16:17:39.13:718,39,0	1/1:0,10:10:30.10:558,30,0
chr10	99263273	.	T	TA	19041.44	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-7.603;DP=721;FS=9.261;HRun=1;HaplotypeScore=179.1487;InbreedingCoeff=0.9799;MQ=80.77;MQ0=0;MQRankSum=-5.843;QD=33.06;ReadPosRankSum=4.232;VQSLOD=3.4056;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,44:49:99:1349,104,0	1/1:0,14:14:42.14:559,42,0	0/0:19,0:19:40.01:0,40,291	0/0:21,0:21:36.01:0,36,193	1/1:0,20:20:59.86:692,60,0	1/1:4,21:25:69.21:893,69,0	1/1:1,27:28:72.24:959,72,0	0/0:28,0:28:29.57:0,30,332	1/1:1,16:17:48.16:635,48,0	1/1:3,25:28:71.26:917,71,0	1/1:1,21:22:51.10:657,51,0	1/1:3,29:32:75.93:1024,76,0	1/1:0,23:23:66.15:855,66,0	1/1:2,31:33:78.26:1043,78,0	1/1:0,35:35:90.30:1201,90,0	0/0:28,0:28:62.78:0,63,221	1/1:0,29:29:75.24:989,75,0	0/0:18,0:18:41.01:0,41,153	1/1:2,24:26:72.60:884,73,0	1/1:3,32:35:96.24:1247,96,0	1/1:3,35:38:89.18:1176,89,0	1/1:2,26:28:69.23:922,69,0	1/1:1,19:20:50.77:682,51,0	1/1:3,24:28:56.21:727,56,0	1/1:0,19:19:51.17:673,51,0	0/0:20,0:20:6.37:0,6,145	1/1:1,26:27:72.71:955,73,0	0/0:11,0:11:16.95:0,17,62
chr10	99265281	.	A	AC	863.70	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.551;DP=776;FS=0.822;HRun=0;HaplotypeScore=166.9045;InbreedingCoeff=0.9969;MQ=82.56;MQ0=0;MQRankSum=0.038;QD=39.26;ReadPosRankSum=1.026;VQSLOD=2.8983;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1572	0/0:11,0:11:30.09:0,30,404	0/0:30,0:30:84.22:0,84,1090	0/0:25,0:25:48.63:0,49,736	0/0:22,0:22:66.22:0,66,920	0/0:15,0:15:45.09:0,45,590	0/0:24,0:24:66.19:0,66,891	0/0:31,0:31:81.26:0,81,1111	0/0:35,0:35:99:0,105,1401	0/0:21,0:21:60.20:0,60,838	0/0:21,0:21:54.18:0,54,754	0/0:35,0:35:99:0,105,1436	0/0:32,0:32:93.28:0,93,1276	0/0:27,0:27:75.05:0,75,958	0/0:40,0:40:99:0,120,1662	0/0:46,0:46:99:0,138,1906	0/0:46,0:46:99:0,126,1717	1/1:0,22:22:60.20:959,60,0	0/0:12,0:12:30.08:0,30,401	0/0:30,0:30:87.29:0,87,1214	0/0:55,0:55:99:0,147,2027	0/0:27,0:27:81.26:0,81,1115	0/0:17,0:17:51.14:0,51,692	0/0:33,0:33:93.20:0,93,1228	0/0:18,0:18:48.16:0,48,671	0/0:26,0:26:72.15:0,72,962	0/0:28,0:28:78.20:0,78,1045	0/0:8,0:8:24.08:0,24,335
chr10	99265331	.	AGAACCAGCCACTTTCTGAGTG	A	4901.22	PASS	AB=0.605;AC=5;AF=0.089;AN=56;BaseQRankSum=8.938;DP=648;FS=3.393;HRun=0;HaplotypeScore=404.3480;InbreedingCoeff=0.7721;MQ=76.43;MQ0=0;MQRankSum=-6.071;QD=106.55;ReadPosRankSum=2.094;VQSLOD=3.5654;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.25:0,72,6110	0/0:13,0:13:36.12:0,36,3611	0/0:21,0:21:63.20:0,63,3930	0/0:28,0:28:78.27:0,78,4827	0/0:16,0:16:39.13:0,39,3362	0/0:19,0:19:54.19:0,54,5137	0/0:17,0:17:51.18:0,51,4453	1/1:6,10:16:30.10:1411,30,0	0/0:35,0:35:99:0,105,9013	0/0:16,0:16:48.16:0,48,3556	0/0:12,0:12:33.11:0,33,2703	0/0:29,0:29:84.24:0,84,6707	0/0:23,0:23:69.16:0,69,5484	0/0:24,0:24:63.20:0,63,5376	0/0:31,0:31:90.25:0,90,7972	0/0:33,0:32:99:0,99,8709	0/0:29,0:29:81.28:0,81,6991	0/0:19,0:19:48.16:0,48,4750	0/0:20,0:20:54.13:0,54,3162	0/0:22,0:22:60.19:0,60,5049	0/0:39,0:39:99:0,114,8370	0/0:30,0:30:87.77:0,88,7149	0/0:16,0:16:45.10:0,45,3076	0/0:36,0:36:90.31:0,90,7820	0/0:24,0:24:69.20:0,69,5534	0/1:8,15:23:99:2606,0,245	0/0:22,0:22:66.20:0,66,5759	1/1:2,5:7:15.05:885,15,0
chr10	99265428	.	AGGCAGGTAATG	A	34249.43	PASS	AB=0.949;AC=49;AF=0.875;AN=56;BaseQRankSum=14.390;DP=623;FS=2.763;HRun=0;HaplotypeScore=223.6411;InbreedingCoeff=0.8195;MQ=83.46;MQ0=3;MQRankSum=-15.781;QD=64.87;ReadPosRankSum=4.316;VQSLOD=4.6236;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,6634	1/1:0,10:10:24.08:846,24,0	0/0:26,0:26:75.25:0,75,3599	0/0:27,0:27:75.26:0,75,3759	1/1:3,28:31:54.14:1818,54,0	1/1:1,19:20:39.13:1367,39,0	1/1:9,10:19:27.09:952,27,0	1/1:5,14:19:34.35:1030,34,0	1/1:7,27:32:69.24:2433,69,0	1/1:1,17:17:45.14:1413,45,0	1/1:2,16:18:33.11:1163,33,0	1/1:1,28:29:69.24:2433,69,0	1/1:2,26:28:72.25:2527,72,0	1/1:2,18:20:39.13:1336,39,0	1/1:3,24:27:69.24:2432,69,0	0/1:35,2:37:99:100,0,5696	1/1:3,8:11:21.07:732,21,0	1/1:2,7:9:18.06:635,18,0	1/1:3,12:15:33.10:979,33,0	1/1:3,22:25:57.15:1924,57,0	1/1:3,10:13:12.04:401,12,0	1/1:2,20:22:39.13:1329,39,0	1/1:4,19:22:48.16:1667,48,0	1/1:7,13:20:27.09:952,27,0	1/1:2,16:18:33.11:1152,33,0	1/1:6,25:31:75.21:2545,75,0	1/1:7,17:24:45.15:1577,45,0	1/1:2,5:7:15.05:509,15,0
chr10	99265811	.	CAA	C	7393.03	PASS	AB=0.679;AC=44;AF=0.786;AN=56;BaseQRankSum=5.257;DP=630;FS=4.611;HRun=14;HaplotypeScore=125.3162;InbreedingCoeff=0.7382;MQ=69.61;MQ0=0;MQRankSum=-0.334;QD=14.00;ReadPosRankSum=6.704;VQSLOD=3.4497;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,1:45:79.55:359,80,0	1/1:2,5:7:15.01:139,15,0	0/0:28,0:23:28.32:0,28,297	0/0:13,0:11:15.03:0,15,175	1/1:5,0:28:34.21:152,34,0	1/1:6,19:26:50.68:456,51,0	1/1:3,17:22:0.01:311,0,0	0/1:14,2:34:8.38:8,0,194	1/1:5,11:17:26.85:297,27,0	1/1:9,10:21:21.12:302,21,0	1/1:7,7:17:13.42:210,13,0	1/1:10,16:28:52.13:491,52,0	1/1:4,30:37:77.42:737,77,0	1/1:7,10:17:29.94:269,30,0	1/1:9,18:27:50.88:472,51,0	0/0:27,0:29:70.96:0,71,852	1/1:8,13:24:20.24:335,20,0	1/1:6,0:25:46.45:201,46,0	0/1:8,5:13:24.46:118,0,24	1/1:4,6:10:20.98:194,21,0	1/1:5,17:24:26.66:343,27,0	1/1:5,10:16:32.73:289,33,0	1/1:2,20:22:41.97:389,42,0	1/1:1,17:19:53.79:484,54,0	1/1:7,11:18:41.90:376,42,0	0/0:11,0:23:30.05:0,30,105	1/1:10,16:30:14.80:461,15,0	0/0:1,0:7:14.97:0,15,52
chr10	99265894	.	G	GAGAA	34309.08	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-6.836;DP=602;FS=24.620;HRun=0;HaplotypeScore=95.3232;InbreedingCoeff=0.9982;MQ=80.35;MQ0=0;MQRankSum=-7.945;QD=68.07;ReadPosRankSum=1.888;VQSLOD=4.3953;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.25:0,78,1445	1/1:1,9:11:27.09:728,27,0	0/0:21,0:21:54.18:0,54,1011	0/0:22,0:22:54.15:0,54,936	1/1:6,12:18:39.12:996,39,0	1/1:6,10:16:42.09:987,42,0	1/1:4,20:24:72.20:1824,72,0	1/1:11,27:42:99:2476,105,0	1/1:2,13:15:36.12:958,36,0	1/1:6,12:21:54.15:1285,54,0	1/1:1,13:14:36.09:971,36,0	1/1:1,20:21:54.19:1458,54,0	1/1:7,17:27:78.27:1920,78,0	1/1:1,19:20:57.15:1451,57,0	1/1:5,25:30:90.18:2181,90,0	0/0:28,0:28:78.25:0,78,1449	1/1:2,19:21:54.10:1335,54,0	1/1:4,13:17:42.14:1133,42,0	1/1:6,13:22:57.14:1335,57,0	1/1:6,14:20:60.16:1462,60,0	1/1:2,31:35:99:2474,99,0	1/1:2,16:19:57.15:1411,57,0	1/1:4,5:9:21.02:450,21,0	1/1:3,24:27:78.18:1942,78,0	1/1:0,11:12:33.11:882,33,0	1/1:9,19:29:81.27:1980,81,0	1/1:2,20:24:69.24:1860,69,0	1/1:0,10:10:30.10:810,30,0
chr10	99265973	.	TA	T	741.37	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.670;DP=580;FS=9.213;HRun=2;HaplotypeScore=83.2044;InbreedingCoeff=0.9932;MQ=92.41;MQ0=0;MQRankSum=-2.640;QD=32.23;ReadPosRankSum=-0.677;VQSLOD=2.4765;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.30:0,90,1346	0/0:8,0:8:24.08:0,24,359	0/0:17,0:16:47.95:0,48,541	0/0:35,0:35:95.29:0,95,1280	0/0:24,0:24:72.24:0,72,1078	0/0:26,0:26:78.26:0,78,1169	0/0:17,0:17:48.12:0,48,695	0/0:37,0:37:99:0,111,1646	0/0:11,0:11:30.06:0,30,424	0/0:20,0:20:57.19:0,57,855	0/0:21,0:21:60.18:0,60,849	0/0:17,0:17:45.15:0,45,675	0/0:27,0:27:81.26:0,81,1192	0/0:8,0:8:24.08:0,24,359	0/0:20,0:20:60.15:0,60,857	0/0:21,0:21:63.21:0,63,944	0/0:26,0:26:75.25:0,75,1124	1/1:0,23:23:66.17:836,66,0	0/0:26,0:26:78.26:0,78,1160	0/0:27,0:27:78.26:0,78,1167	0/0:23,0:23:66.22:0,66,989	0/0:16,0:16:48.15:0,48,698	0/0:13,0:13:39.13:0,39,584	0/0:15,0:15:45.07:0,45,624	0/0:13,0:13:36.12:0,36,540	0/0:24,0:24:72.24:0,72,1078	0/0:24,0:24:69.20:0,69,1004	0/0:8,0:8:24.08:0,24,355
chr10	99268199	.	AGAGAGAGAGAGAGAGAGAGAGAGC	A	1026.16	PASS	AB=0.918;AC=11;AF=0.196;AN=56;BaseQRankSum=2.829;DP=564;FS=21.560;HRun=0;HaplotypeScore=231.1424;InbreedingCoeff=-0.0889;MQ=48.82;MQ0=17;MQRankSum=1.730;QD=5.01;ReadPosRankSum=-2.624;VQSLOD=1.0732;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,29:46:77.92:193,0,78	0/0:8,0:8:16.08:0,16,441	0/0:23,0:6:15.03:0,15,508	0/0:43,0:11:21.78:0,22,513	0/1:20,0:20:10.18:10,0,221	0/0:11,0:10:14.76:0,15,720	0/0:21,0:21:37.02:0,37,1354	0/1:12,0:11:76.70:77,0,82	0/0:22,0:21:36.63:0,37,1542	0/0:15,0:14:38.55:0,39,1120	0/1:11,0:10:13.62:14,0,368	0/0:22,0:22:11.21:0,11,1415	0/0:21,0:21:13.71:0,14,882	0/0:20,0:20:12.13:0,12,881	0/0:17,0:17:10.94:0,11,440	0/0:19,0:18:42.14:0,42,2936	0/0:14,0:14:6.18:0,6,338	0/0:20,0:19:27.09:0,27,1698	0/0:20,0:19:57.06:0,57,2062	0/1:13,0:13:10.90:11,0,431	0/0:20,0:20:18.28:0,18,804	1/1:14,0:14:3.47:26,3,0	0/1:19,0:19:29.01:29,0,907	0/0:24,0:24:30.39:0,30,1231	0/1:21,0:21:19.12:19,0,1600	0/1:29,0:29:99:601,0,182	0/0:19,0:18:42.14:0,42,1315	0/1:7,10:17:25.70:190,0,26
chr10	99268219	.	AGAGC	A	6626.85	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=-5.210;DP=593;FS=15.078;HRun=0;HaplotypeScore=104.7699;InbreedingCoeff=0.2370;MQ=71.09;MQ0=12;MQRankSum=-0.220;QD=13.15;ReadPosRankSum=2.664;VQSLOD=3.5174;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:31:1.32:44,1,0	1/1:11,0:11:26.89:222,27,0	0/0:24,0:17:40.02:0,40,335	0/0:43,0:25:50.84:0,51,386	1/1:25,0:25:38.96:324,39,0	0/1:16,0:15:11.85:195,0,12	0/1:19,0:19:5.07:223,0,5	1/1:26,0:25:75:683,75,0	0/1:25,0:24:5.83:275,0,6	1/1:20,0:20:42.57:471,43,0	1/1:14,0:13:24.45:202,24,0	1/1:21,0:21:0.62:223,1,0	0/1:17,0:17:11.66:141,0,12	1/1:23,0:23:18.15:413,18,0	1/1:16,1:17:35.83:288,36,0	0/0:22,0:21:38.84:0,39,435	1/1:16,0:16:34.17:257,34,0	1/1:7,12:18:3:56,3,0	0/1:29,0:28:65.17:471,0,65	1/1:20,0:20:38.93:325,39,0	1/1:22,0:22:32.56:267,33,0	1/1:14,0:14:20.98:178,21,0	0/1:21,0:21:28.61:148,0,29	1/1:23,0:22:29.10:246,29,0	0/1:22,0:22:37.36:236,0,37	1/1:17,0:17:38.91:343,39,0	1/1:24,0:23:27.43:359,27,0	1/1:10,0:10:3.01:36,3,0
chr10	99268498	.	AGT	A	613.92	PASS	AB=0.938;AC=4;AF=0.071;AN=56;BaseQRankSum=3.307;DP=1173;FS=0.690;HRun=0;HaplotypeScore=233.6814;InbreedingCoeff=0.5554;MQ=54.95;MQ0=8;MQRankSum=0.816;QD=8.08;ReadPosRankSum=1.421;VQSLOD=3.2692;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:66,2:68:88.79:0,89,2411	0/1:14,1:15:1.07:1,0,502	0/0:40,0:13:27.06:0,27,405	0/0:48,0:27:45.33:0,45,591	0/0:40,0:40:72.16:0,72,1158	0/0:27,0:26:57.19:0,57,911	0/1:29,2:31:8.22:8,0,802	0/0:45,0:45:96.31:0,96,1515	0/0:49,1:50:74.19:0,74,1692	0/0:54,0:54:99:0,125,1969	0/0:23,0:23:39.28:0,39,725	0/0:41,1:42:38.03:0,38,1124	0/0:59,0:59:99:0,150,2408	0/0:55,0:55:99:0,105,1738	0/0:50,0:50:96.22:0,96,1535	0/0:54,0:54:99:0,123,1964	0/0:34,0:34:83.30:0,83,1230	1/1:6,24:30:57.18:707,57,0	0/0:27,0:25:53.75:0,54,819	0/0:36,0:36:87.22:0,87,1408	0/0:102,1:103:99:0,213,3784	0/0:32,0:32:63.20:0,63,1003	0/0:29,0:29:60.20:0,60,938	0/0:58,0:58:99:0,115,1785	0/0:33,1:34:41.07:0,41,1190	0/0:38,0:38:93.27:0,93,1484	0/0:34,0:34:75.26:0,75,1216	0/0:16,0:16:39.08:0,39,581
chr10	99268653	.	T	TGA	4062.01	PASS	AB=0.910;AC=28;AF=0.500;AN=56;BaseQRankSum=13.282;DP=1115;FS=38.781;HRun=0;HaplotypeScore=377.1171;InbreedingCoeff=-0.4307;MQ=44.14;MQ0=8;MQRankSum=-11.530;QD=4.58;ReadPosRankSum=7.251;VQSLOD=1.4239;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:41,7:59:99:760,0,141	1/1:11,0:11:17.27:57,17,0	0/0:47,0:24:60.15:0,60,791	0/0:62,0:24:54.13:0,54,590	0/1:27,0:27:59.43:69,0,59	0/1:18,0:18:1.72:2,0,31	1/1:32,0:32:12.45:117,12,0	0/1:51,15:68:99:1197,0,391	1/1:57,0:57:2.32:133,2,0	0/1:44,0:45:61.81:62,0,177	0/1:19,0:19:14.24:14,0,82	0/1:52,0:53:63.52:156,0,64	0/1:50,0:50:19.80:121,0,20	0/1:51,0:51:5.61:84,0,6	1/1:69,0:69:30.40:221,30,0	0/0:63,0:63:99:0,180,2619	0/1:40,0:40:21.98:29,0,22	0/1:7,1:20:37.68:120,0,38	0/1:20,0:18:28.38:28,0,50	0/1:34,0:34:12.89:13,0,147	0/0:56,0:56:0.02:0,0,125	0/1:33,0:33:33.29:33,0,104	0/1:24,0:23:16.49:45,0,16	0/1:58,0:58:15.69:16,0,110	0/1:24,0:24:30.95:47,0,31	0/1:4,0:33:9:624,0,9	0/1:27,0:27:15.92:30,0,16	0/1:2,0:14:28.03:85,0,28
chr10	99268657	.	T	TGTGTTTGA	44941.73	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=0.293;DP=1199;FS=0.356;HRun=0;HaplotypeScore=292.3230;InbreedingCoeff=0.3496;MQ=45.06;MQ0=11;MQRankSum=-9.029;QD=41.34;ReadPosRankSum=2.362;VQSLOD=3.8964;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:56,0:56:99:627,0,254	1/1:0,11:11:21.07:826,21,0	0/0:49,0:25:57.08:0,57,1176	0/1:61,0:21:10.07:10,0,629	1/1:1,23:29:60.20:1810,60,0	1/1:1,14:20:14.76:471,15,0	1/1:1,26:31:41.16:865,41,0	0/1:68,0:67:99:1891,0,108	1/1:1,57:65:99:3956,105,0	1/1:2,42:52:99:4365,141,0	1/1:0,20:24:42.61:1073,43,0	1/1:4,49:63:96.31:3539,96,0	1/1:3,48:57:90.09:3719,90,0	1/1:2,48:58:81.18:3044,81,0	1/1:2,69:78:99:4484,126,0	0/0:61,1:62:46.16:0,46,4376	1/1:2,33:42:30.01:788,30,0	0/1:18,0:18:85.90:95,0,86	1/1:5,15:21:54.18:1834,54,0	1/1:1,32:42:75.05:1481,75,0	1/1:9,50:75:47.51:883,48,0	1/1:2,26:34:69.07:1856,69,0	1/1:1,25:26:39.13:1236,39,0	1/1:4,49:60:59.70:1320,60,0	1/1:3,18:24:25:1156,25,0	0/1:30,0:30:98.64:1340,0,99	1/1:0,21:26:42.14:1750,42,0	1/1:12,0:12:15.05:519,15,0
chr10	99268661	.	T	TTTGA	15452.19	PASS	AB=0.990;AC=26;AF=0.464;AN=56;BaseQRankSum=7.210;DP=1142;FS=1.919;HRun=0;HaplotypeScore=351.9781;InbreedingCoeff=-0.7232;MQ=44.65;MQ0=12;MQRankSum=-10.128;QD=15.90;ReadPosRankSum=10.581;VQSLOD=2.9182;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:48,2:53:99:564,0,551	0/1:11,0:11:24.52:298,0,25	0/0:46,0:23:68.98:0,69,1144	0/0:61,0:22:41.34:0,41,736	0/1:29,0:29:99:524,0,289	0/1:17,0:17:63.46:138,0,63	0/1:25,0:25:99:161,0,397	0/1:52,10:64:99:1279,0,557	0/1:59,0:59:99:1398,0,136	0/1:46,0:46:99:1422,0,306	0/1:24,0:24:99:281,0,144	0/1:61,0:62:99:1196,0,215	0/1:56,0:56:65.32:1346,0,65	0/1:56,0:56:99:1035,0,167	0/1:78,0:79:99:1476,0,411	0/0:61,0:61:99:0,125,3470	0/1:38,0:38:99:201,0,142	0/1:16,0:16:29.09:29,0,217	0/1:23,0:21:99:462,0,104	0/1:40,0:40:99:310,0,415	0/1:74,0:74:99:161,0,309	0/1:29,0:30:99:534,0,192	0/1:29,0:28:99:371,0,132	0/1:56,0:56:99:365,0,108	0/1:21,0:21:99:387,0,135	0/1:32,0:32:99:572,0,373	1/1:21,0:21:21.15:702,21,0	0/1:10,0:10:28.71:239,0,29
chr10	99268829	.	AGT	A	3671.75	PASS	AB=0.948;AC=11;AF=0.196;AN=56;BaseQRankSum=5.280;DP=1038;FS=3.352;HRun=0;HaplotypeScore=252.4504;InbreedingCoeff=0.7682;MQ=53.21;MQ0=14;MQRankSum=-0.660;QD=17.08;ReadPosRankSum=0.324;VQSLOD=3.4847;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,41:51:67.13:1073,67,0	0/0:10,0:10:27.04:0,27,393	0/0:55,0:18:38.28:0,38,476	0/0:47,0:24:36.57:0,37,684	0/1:19,1:20:1.72:2,0,502	0/1:16,1:17:4.75:5,0,440	0/1:34,2:36:0.32:0,0,1047	1/1:9,29:38:87.22:1035,87,0	0/0:41,0:41:69.24:0,69,1141	0/0:44,1:44:73.57:0,74,1749	0/0:20,0:20:39.07:0,39,553	0/0:45,1:46:58.47:0,58,1457	0/0:40,0:40:63.16:0,63,991	0/0:38,0:38:57.18:0,57,905	0/0:60,0:60:90.05:0,90,1427	0/0:43,1:44:70.47:0,70,1670	0/0:43,0:43:86.89:0,87,1415	0/0:37,0:37:85.05:0,85,1275	0/0:16,1:16:23.19:0,23,608	0/0:39,0:39:99:0,105,1690	0/0:69,1:69:99:0,108,2326	0/0:33,0:33:78.25:0,78,1270	0/0:22,1:23:19.32:0,19,833	0/0:56,0:56:99:0,127,2095	0/0:30,0:30:60.21:0,60,995	1/1:8,32:40:99:1217,99,0	0/0:29,0:29:57.17:0,57,906	1/1:4,9:13:27.09:340,27,0
chr10	99269033	.	CA	C	3512.02	PASS	AB=0.994;AC=52;AF=0.929;AN=56;BaseQRankSum=-2.349;DP=365;FS=23.310;HRun=2;HaplotypeScore=71.7704;InbreedingCoeff=0.1899;MQ=61.87;MQ0=28;MQRankSum=1.244;QD=9.62;ReadPosRankSum=1.821;VQSLOD=-0.0065;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,1:16:30.13:246,30,0	1/1:4,0:4:8.87:60,9,0	0/1:37,1:12:19.37:19,0,205	0/1:44,0:13:14.72:15,0,114	1/1:0,12:12:29.12:170,29,0	1/1:8,0:7:18.61:125,19,0	1/1:14,0:14:31.02:226,31,0	1/1:6,18:20:46.36:355,46,0	1/1:10,0:10:17.72:122,18,0	1/1:10,0:9:20.88:170,21,0	1/1:1,7:8:14.35:80,14,0	1/1:8,0:8:23.77:191,24,0	1/1:7,0:7:16.10:113,16,0	0/1:8,0:7:0:0,0,0	1/1:13,1:13:28.52:212,29,0	1/1:9,0:7:16.14:120,16,0	1/1:20,0:17:12.18:294,12,0	1/1:11,0:10:21.31:152,21,0	1/1:7,6:9:14.88:114,15,0	1/1:10,0:9:17.65:111,18,0	1/1:7,0:7:9.92:75,10,0	1/1:3,7:10:2.69:13,3,0	1/1:3,10:11:6.90:45,7,0	1/1:14,0:14:20.36:138,20,0	0/1:10,0:9:0.25:0,0,0	1/1:13,0:12:29.35:227,29,0	1/1:3,0:3:2.92:17,3,0	1/1:6,0:5:14.87:104,15,0
chr10	99269034	.	AATGG	A	4265.16	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-1.785;DP=369;FS=23.256;HRun=0;HaplotypeScore=79.9481;InbreedingCoeff=0.1012;MQ=61.01;MQ0=35;MQRankSum=2.390;QD=11.56;ReadPosRankSum=1.496;VQSLOD=2.4412;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:33.15:320,33,0	1/1:3,0:4:11.67:79,12,0	0/1:39,0:12:34.47:34,0,285	0/1:47,0:13:56.45:56,0,116	1/1:13,0:12:29.49:192,29,0	1/1:8,0:7:18.77:140,19,0	1/1:14,1:14:32.84:240,33,0	1/1:24,0:20:47.73:418,48,0	1/1:7,2:9:18.84:157,19,0	1/1:9,0:8:20.92:186,21,0	1/1:8,0:8:14.77:105,15,0	1/1:8,0:8:23.90:205,24,0	1/1:7,0:7:15.82:121,16,0	1/1:1,7:7:0.47:1,0,0	1/1:14,1:13:33.28:286,33,0	1/1:9,0:7:8.94:98,9,0	1/1:18,0:17:29.96:389,30,0	1/1:10,0:9:24.39:193,24,0	0/1:15,0:8:18.47:134,0,18	1/1:1,9:9:17.81:123,18,0	1/1:7,0:7:10.77:84,11,0	1/1:8,0:8:2.52:14,3,0	1/1:13,0:11:8.10:52,8,0	1/1:14,0:14:21.40:151,21,0	1/1:1,8:8:0.87:2,1,0	1/1:11,0:12:30.81:306,31,0	1/1:4,0:4:6.37:41,6,0	1/1:6,0:5:14.96:137,15,0
chr10	99269110	.	A	AT	5850.71	PASS	AB=0.712;AC=42;AF=0.750;AN=56;BaseQRankSum=-2.680;DP=488;FS=9.552;HRun=13;HaplotypeScore=104.7639;InbreedingCoeff=0.1048;MQ=64.98;MQ0=9;MQRankSum=0.449;QD=13.21;ReadPosRankSum=-1.249;VQSLOD=3.5967;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,14:26:13.47:281,0,13	1/1:8,3:11:0.01:141,0,0	0/0:13,0:10:0.47:0,0,10	0/0:18,0:12:3.05:0,3,22	1/1:7,13:20:29.50:421,29,0	1/1:2,7:9:6.19:187,6,0	1/1:7,11:19:41.89:363,42,0	1/1:7,2:21:39.87:271,40,0	0/1:7,10:17:9.23:240,0,9	1/1:10,9:21:10.20:241,10,0	1/1:6,15:21:35.72:308,36,0	0/1:10,6:15:0.27:158,0,0	0/1:5,6:11:13.99:159,0,14	0/1:9,5:14:16.95:138,0,17	1/1:4,11:15:30.03:278,30,0	0/0:14,0:12:23.60:0,24,156	1/1:16,14:27:42.02:474,42,0	1/1:4,0:9:17.11:88,17,0	1/1:8,5:12:23.96:212,24,0	1/1:16,16:33:32.99:436,33,0	0/1:5,1:6:5.89:6,0,13	1/1:5,9:15:0.46:250,0,0	0/1:12,8:21:5.29:226,0,5	0/1:10,4:15:9.26:158,0,9	1/1:3,6:9:3.43:170,3,0	1/1:11,2:24:40.16:230,40,0	1/1:9,10:18:2.08:199,2,0	1/1:4,0:21:42.61:215,43,0
chr10	99269816	.	A	ATT	670.19	PASS	AB=0.574;AC=1;AF=0.018;AN=56;BaseQRankSum=-0.622;DP=597;FS=2.753;HRun=9;HaplotypeScore=77.0095;InbreedingCoeff=0.5170;MQ=78.27;MQ0=0;MQRankSum=-0.475;QD=21.62;ReadPosRankSum=-0.982;VQSLOD=2.8065;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:8,22:31:2:745,0,2	0/0:7,0:7:18.04:0,18,192	0/0:22,0:19:28.05:0,28,283	0/0:13,0:12:12.69:0,13,108	0/0:28,0:29:74.36:0,74,773	0/0:19,0:22:35.85:0,36,384	0/0:22,0:22:54.04:0,54,555	0/0:25,0:25:53.93:0,54,545	0/0:20,0:20:50.10:0,50,514	0/0:17,0:18:44.31:0,44,454	0/0:21,0:21:57.14:0,57,607	0/0:19,0:19:48.08:0,48,503	0/0:21,0:21:48.05:0,48,503	0/0:14,0:14:29.99:0,30,301	0/0:22,0:22:35.72:0,36,582	0/0:23,0:23:57.11:0,57,604	0/0:23,0:23:60.11:0,60,638	0/0:22,0:22:51.04:0,51,520	0/0:21,0:21:51.10:0,51,525	0/0:27,0:29:66.05:0,66,746	0/0:18,0:21:35.83:0,36,403	0/0:11,0:11:26.98:0,27,267	0/0:15,0:19:34.85:0,35,381	0/0:35,0:38:99:0,101,1008	0/0:27,0:28:59.02:0,59,681	0/0:23,0:23:64.80:0,65,676	0/0:21,0:21:57.10:0,57,590	0/0:11,0:12:26.80:0,27,267
chr10	99270358	.	TTA	T	1534.97	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=5.891;DP=408;FS=18.869;HRun=0;HaplotypeScore=99.3265;InbreedingCoeff=-0.1588;MQ=82.50;MQ0=1;MQRankSum=-2.189;QD=4.36;ReadPosRankSum=7.906;VQSLOD=0.3865;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:21:15.58:23,0,16	1/1:5,0:5:3.54:7,4,0	0/0:23,0:21:36.63:0,37,340	0/0:9,0:8:8.76:0,9,105	0/1:27,0:27:46.34:61,0,46	0/1:17,0:17:5.01:19,0,5	1/1:9,0:9:9.08:28,9,0	1/1:34,0:36:67.50:469,68,0	0/1:12,0:12:20.43:27,0,20	0/1:13,0:13:22.25:53,0,22	0/1:8,0:8:10:10,0,28	0/1:14,0:14:16.67:58,0,17	0/1:16,0:16:39.21:50,0,39	0/0:13,0:13:4.01:0,4,49	0/1:12,0:12:0.46:0,0,27	0/0:11,0:11:33.11:0,33,602	0/1:21,0:21:27.64:72,0,28	1/1:0,11:11:27.02:352,27,0	0/1:17,0:17:12.16:61,0,12	0/1:20,0:20:14.48:48,0,14	1/1:16,0:16:7.97:17,8,0	0/1:7,0:7:8.41:8,0,24	0/1:5,0:5:12.07:13,0,12	0/1:14,0:14:2.64:3,0,16	0/1:13,0:13:9.87:10,0,35	1/1:13,0:13:35.51:196,36,0	0/1:17,0:17:8.71:18,0,9	1/1:7,0:7:18.35:101,18,0
chr10	99270359	.	TA	T	7056.02	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-0.641;DP=401;FS=0.809;HRun=5;HaplotypeScore=73.2459;InbreedingCoeff=0.8559;MQ=81.96;MQ0=1;MQRankSum=-2.473;QD=19.65;ReadPosRankSum=1.528;VQSLOD=4.3268;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:22:50.17:545,50,0	1/1:0,5:5:15:154,15,0	0/0:22,0:20:20.29:0,20,197	0/0:9,0:8:0.93:0,1,35	1/1:2,24:27:68.01:690,68,0	1/1:1,15:17:35.13:377,35,0	1/1:0,8:9:23.10:242,23,0	1/1:3,1:34:73.72:319,74,0	1/1:4,8:12:29.87:301,30,0	1/1:7,4:12:26.22:197,26,0	1/1:2,5:8:16.67:175,17,0	1/1:4,9:14:34.87:327,35,0	1/1:5,8:15:37.91:353,38,0	1/1:3,10:13:21.05:230,21,0	1/1:2,10:12:21.06:236,21,0	0/0:11,0:11:33.11:0,33,422	1/1:4,14:20:51.94:499,52,0	1/1:11,0:11:26.34:155,26,0	1/1:6,9:17:39.78:378,40,0	1/1:1,18:20:50.69:524,51,0	1/1:0,16:16:27.08:303,27,0	1/1:3,3:6:10.42:113,10,0	1/1:2,3:5:11.95:117,12,0	1/1:3,11:14:18.05:202,18,0	1/1:2,10:13:17.06:203,17,0	1/1:0,1:13:28.68:121,29,0	1/1:1,16:17:20.99:220,21,0	1/1:0,1:7:15.23:71,15,0
chr10	99270529	.	CCT	C	843.76	PASS	AB=0.960;AC=23;AF=0.411;AN=56;BaseQRankSum=4.297;DP=305;FS=9.440;HRun=0;HaplotypeScore=99.2584;InbreedingCoeff=-0.2956;MQ=59.11;MQ0=1;MQRankSum=-6.659;QD=3.96;ReadPosRankSum=6.411;VQSLOD=0.5163;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:40.71:0,41,240	0/1:5,0:5:13.26:40,0,13	0/0:9,0:7:15.02:0,15,182	0/0:11,0:10:7.58:0,8,161	0/1:12,0:12:6.82:7,0,78	0/1:11,2:13:26.30:47,0,26	1/1:15,0:15:7.27:121,7,0	0/0:14,0:14:33.32:0,33,248	0/1:5,1:6:7.36:84,0,7	0/1:13,0:13:14.95:15,0,151	0/1:5,0:5:0.56:1,0,13	0/1:12,1:13:41.15:94,0,41	0/1:8,2:10:0.01:112,0,0	0/1:7,1:8:27.52:89,0,28	0/1:6,0:6:31.20:31,0,33	0/0:8,0:8:19.88:0,20,270	0/1:12,0:12:51.17:51,0,60	0/1:10,0:10:22.47:22,0,60	0/1:9,0:9:26:26,0,61	0/1:11,1:12:3.69:4,0,103	0/1:6,0:6:8.65:9,0,48	1/1:10,0:10:18.14:94,18,0	0/1:12,0:11:28.14:28,0,113	0/1:7,0:7:5.37:5,0,46	0/1:11,0:11:53.76:54,0,103	0/0:14,0:14:22.33:0,22,159	0/1:17,1:18:69.10:69,0,155	0/0:6,0:6:7.99:0,8,21
chr10	99270531	.	TCC	T	3626.58	PASS	AB=0.737;AC=48;AF=0.857;AN=56;BaseQRankSum=2.927;DP=308;FS=8.620;HRun=12;HaplotypeScore=91.3467;InbreedingCoeff=0.3703;MQ=62.38;MQ0=1;MQRankSum=-6.467;QD=12.59;ReadPosRankSum=5.086;VQSLOD=1.7686;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:28:6.77:71,0,7	1/1:2,3:5:9:91,9,0	0/0:11,0:9:14.75:0,15,122	0/1:13,0:11:7.11:7,0,74	0/1:4,6:11:8.02:61,0,8	1/1:6,7:13:20.83:207,21,0	1/1:2,12:14:32.86:335,33,0	1/1:7,0:13:12.98:58,13,0	0/1:3,4:7:1.92:133,0,2	1/1:8,5:13:17.99:183,18,0	1/1:1,4:5:2.99:30,3,0	1/1:3,7:11:26.79:255,27,0	1/1:5,6:12:32.78:303,33,0	1/1:4,5:9:18.02:181,18,0	1/1:2,4:6:12.01:122,12,0	0/0:9,0:9:21.01:0,21,234	1/1:5,6:13:26.48:237,26,0	1/1:5,5:10:11.95:122,12,0	1/1:4,5:9:15.47:148,15,0	1/1:7,3:11:8.73:73,9,0	1/1:5,3:8:5.30:60,5,0	1/1:1,9:10:23.72:224,24,0	1/1:5,7:11:11.91:111,12,0	1/1:3,4:7:5.99:61,6,0	1/1:8,4:13:20.73:194,21,0	1/1:6,0:13:21.84:94,22,0	1/1:8,6:16:5.27:207,5,0	1/1:1,0:6:13.72:59,14,0
chr10	99270634	.	T	TTA	892.41	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.002;DP=453;FS=1.987;HRun=0;HaplotypeScore=58.2160;InbreedingCoeff=0.9562;MQ=91.46;MQ0=0;MQRankSum=-1.776;QD=37.18;ReadPosRankSum=0.584;VQSLOD=5.4179;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.20:0,84,1126	0/0:5,0:5:15.05:0,15,215	0/0:21,0:21:51.03:0,51,680	0/0:18,0:18:39.13:0,39,546	0/0:9,0:9:27.09:0,27,387	0/0:16,0:16:45.15:0,45,644	0/0:25,0:25:72.23:0,72,1015	0/0:20,0:20:54.14:0,54,736	0/0:20,0:20:51.17:0,51,731	0/0:7,0:7:18.06:0,18,258	0/0:7,0:7:21.07:0,21,300	0/0:17,0:17:48.16:0,48,688	0/0:16,0:16:48.16:0,48,687	0/0:8,0:8:21.03:0,21,263	0/0:12,0:12:33.11:0,33,473	0/0:15,0:15:45.15:0,45,645	0/0:23,0:23:60.20:0,60,859	1/1:0,23:24:54.19:987,54,0	0/0:17,0:17:42.13:0,42,586	0/0:12,0:12:33.11:0,33,473	0/0:23,0:23:57.18:0,57,798	0/0:6,0:6:18.06:0,18,257	0/0:16,0:16:45.11:0,45,622	0/0:26,0:26:78.26:0,78,1117	0/0:13,0:13:36.04:0,36,471	0/0:14,0:14:42.11:0,42,560	0/0:24,0:24:66.20:0,66,925	0/0:7,0:7:21.07:0,21,301
chr10	99271051	.	AG	A	508.26	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=6.246;DP=517;FS=1.857;HRun=6;HaplotypeScore=76.9504;InbreedingCoeff=0.5826;MQ=63.55;MQ0=5;MQRankSum=-1.913;QD=11.05;ReadPosRankSum=1.403;VQSLOD=1.8380;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:36.08:0,36,439	0/0:8,0:8:6.46:0,6,80	0/0:32,1:20:51.10:0,51,612	0/1:23,0:13:9.75:10,0,227	0/0:12,0:12:27.07:0,27,340	0/0:19,0:19:30.07:0,30,366	0/0:22,0:22:36.12:0,36,472	0/0:20,0:20:25.62:0,26,320	0/0:20,0:20:39.13:0,39,513	0/0:18,0:18:45.13:0,45,564	0/0:5,0:5:13.58:0,14,147	0/0:18,0:18:48.08:0,48,558	0/0:10,0:10:27.07:0,27,339	0/0:27,0:27:75.22:0,75,951	0/0:23,0:23:41.53:0,42,486	0/0:15,0:15:32.89:0,33,414	0/0:25,0:25:54.12:0,54,675	1/1:6,17:23:57.10:601,57,0	0/0:13,0:11:30.05:0,30,375	0/0:9,0:8:15.03:0,15,184	0/0:37,0:38:77.76:0,78,942	0/0:9,0:9:9.03:0,9,118	0/0:8,0:8:21.04:0,21,248	0/0:34,0:32:42.59:0,43,553	0/0:14,0:14:39.13:0,39,511	0/0:25,0:24:54.13:0,54,664	0/0:20,0:20:42.12:0,42,531	0/0:9,0:9:24.08:0,24,315
chr10	99271062	.	GGTGT	G	1619.59	PASS	AB=0.924;AC=33;AF=0.786;AN=42;BaseQRankSum=-0.866;DP=505;FS=11.782;HRun=0;HaplotypeScore=92.8112;InbreedingCoeff=0.1406;MQ=56.48;MQ0=16;MQRankSum=1.684;QD=4.69;ReadPosRankSum=2.326;VQSLOD=1.1897;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,7:9:2.55:46,3,0	./.	./.	./.	0/0:7,1:14:1.55:0,2,4	./.	./.	1/1:12,8:21:6.01:74,6,0	0/1:14,4:17:8.89:99,0,9	./.	1/1:17,0:18:15.51:190,16,0	1/1:7,0:7:4.56:43,5,0	1/1:25,0:26:19.69:223,20,0	1/1:11,7:18:6.49:80,6,0	0/1:15,1:20:31.09:31,0,159	1/1:16,7:23:9.03:138,9,0	1/1:22,0:22:12.47:160,12,0	1/1:17,1:14:5.31:73,5,0	1/1:5,3:7:2.90:46,3,0	1/1:31,13:44:3.01:46,3,0	1/1:4,6:10:3.01:34,3,0	0/0:7,0:6:0:0,0,0	1/1:18,16:33:11.71:184,12,0	1/1:13,4:16:3.01:46,3,0	0/0:24,0:24:6.74:0,7,27	1/1:15,0:15:17.92:184,18,0	0/1:11,0:11:6.72:33,0,7
chr10	99272200	.	C	CCTGT	17431.63	PASS	AB=0.672;AC=45;AF=0.804;AN=56;BaseQRankSum=-4.171;DP=688;FS=0.000;HRun=0;HaplotypeScore=145.0416;InbreedingCoeff=0.5413;MQ=59.69;MQ0=6;MQRankSum=-3.865;QD=28.81;ReadPosRankSum=-2.064;VQSLOD=4.4798;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,13:29:28.91:621,29,0	0/1:6,7:15:21.92:477,0,22	0/0:23,0:16:9.03:0,9,144	0/0:23,0:20:17.42:0,17,269	0/1:12,7:19:33.10:274,0,33	1/1:10,20:33:0.01:988,0,0	1/1:9,11:21:24.08:575,24,0	1/1:43,0:36:53.88:642,54,0	1/1:8,12:20:39.13:937,39,0	1/1:14,7:20:27.09:576,27,0	1/1:4,12:16:21.07:505,21,0	0/1:17,18:35:3.01:966,0,3	1/1:10,17:27:3.02:1106,3,0	1/1:8,16:23:39.13:938,39,0	1/1:11,15:26:0.01:1029,0,0	0/0:19,0:19:33.11:0,33,530	1/1:10,19:28:45.15:1083,45,0	0/0:18,0:18:37.68:0,38,579	1/1:14,8:22:36.12:766,36,0	1/1:9,11:20:11.63:288,12,0	1/1:21,19:42:39.13:939,39,0	1/1:9,6:17:11.99:273,12,0	1/1:12,7:20:15.05:361,15,0	1/1:6,9:16:21.07:505,21,0	1/1:9,14:23:39.13:888,39,0	1/1:33,0:33:78.37:1065,78,0	1/1:11,25:35:15.05:1393,15,0	1/1:12,0:11:17.23:237,17,0
chr10	99272205	.	C	CTG	3104.12	PASS	AB=0.962;AC=24;AF=0.429;AN=56;BaseQRankSum=11.070;DP=683;FS=15.736;HRun=0;HaplotypeScore=136.8656;InbreedingCoeff=-0.7489;MQ=60.42;MQ0=7;MQRankSum=1.208;QD=5.19;ReadPosRankSum=11.422;VQSLOD=0.4338;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:28:57.34:57,0,141	0/1:13,0:13:66.99:67,0,99	0/0:27,0:20:33.19:0,33,541	0/0:21,0:19:47.65:0,48,636	0/1:20,0:20:27.78:28,0,203	0/1:34,0:34:99:122,0,145	0/1:21,0:21:74.10:74,0,158	0/1:20,22:35:99:834,0,216	0/1:20,0:20:99:126,0,241	0/1:18,0:17:27.30:27,0,343	0/1:17,0:17:70.82:71,0,82	0/1:35,0:35:99:118,0,476	0/1:28,0:27:99:158,0,272	0/1:25,0:23:99:130,0,163	0/1:24,0:24:99:145,0,218	0/0:17,0:17:42.14:0,42,601	0/1:31,0:30:99:150,0,234	0/0:20,0:20:50.76:0,51,697	0/1:18,0:18:59.42:59,0,356	0/1:20,0:20:30.16:30,0,169	0/1:42,0:42:99:113,0,420	0/1:17,0:17:19.21:19,0,154	0/1:20,0:19:25.63:54,0,26	0/1:17,0:17:63.55:64,0,180	0/1:23,0:22:49.64:107,0,50	0/1:25,11:36:99:415,0,782	0/1:36,0:34:99:205,0,223	0/1:6,6:11:88.82:89,0,134
chr10	99273651	.	G	GTTTTT	7888.41	PASS	AB=0.818;AC=48;AF=0.857;AN=56;BaseQRankSum=-2.230;DP=663;FS=1.677;HRun=16;HaplotypeScore=138.5960;InbreedingCoeff=0.5858;MQ=74.51;MQ0=3;MQRankSum=-3.388;QD=13.70;ReadPosRankSum=-3.346;VQSLOD=0.8656;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:15.05:301,15,0	1/1:10,0:12:15.05:249,15,0	0/0:40,0:28:17.39:0,17,140	0/0:26,0:16:2.74:0,3,34	1/1:27,0:28:29.85:435,30,0	1/1:17,0:17:39.08:616,39,0	1/1:17,7:26:11.93:161,12,0	1/1:18,0:16:16.58:222,17,0	1/1:19,0:22:33.10:462,33,0	1/1:30,0:30:47.80:739,48,0	1/1:24,0:24:31.60:497,32,0	1/1:11,0:24:16.86:230,17,0	1/1:20,0:21:14.81:206,15,0	1/1:11,0:21:3.01:49,3,0	1/1:14,1:26:18.05:252,18,0	0/0:18,0:20:38.06:0,38,469	1/1:8,1:24:9.50:173,10,0	1/1:14,1:26:12.04:242,12,0	1/1:21,0:37:56.45:834,56,0	1/1:13,0:23:20.80:363,21,0	0/1:9,1:17:1.76:128,0,2	1/1:22,0:22:16.27:253,16,0	0/1:21,0:22:26.33:156,0,26	1/1:12,1:25:12.51:235,13,0	1/1:10,8:25:19.23:262,19,0	1/1:24,0:24:25.82:298,26,0	1/1:14,15:31:8.75:187,9,0	1/1:14,0:14:30.02:339,30,0
chr10	99277758	.	TTAG	T	698.47	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.915;DP=640;FS=3.353;HRun=0;HaplotypeScore=87.0710;InbreedingCoeff=0.9984;MQ=81.91;MQ0=0;MQRankSum=-3.340;QD=34.92;ReadPosRankSum=1.068;VQSLOD=4.2637;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.22:0,63,1445	0/0:14,0:14:42.14:0,42,992	0/0:21,0:21:53.25:0,53,1034	0/0:18,0:18:25.55:0,26,766	0/0:18,0:18:54.19:0,54,1276	0/0:30,0:30:90.13:0,90,1962	0/0:13,0:13:39.12:0,39,832	0/0:25,0:25:72.12:0,72,1567	0/0:24,0:24:72.23:0,72,1654	0/0:28,0:27:84.27:0,84,1795	0/0:28,0:28:84.27:0,84,1886	0/0:17,0:17:48.14:0,48,994	0/0:23,0:23:69.22:0,69,1558	0/0:16,0:16:48.16:0,48,1129	0/0:28,0:28:81.28:0,81,1899	0/0:14,0:14:42.13:0,42,925	0/0:31,0:31:93.32:0,93,2150	1/1:1,19:20:45.15:793,45,0	0/0:23,0:23:69.24:0,69,1551	0/0:29,0:29:87.28:0,87,1967	0/0:20,0:20:57.18:0,57,1278	0/0:30,0:30:90.26:0,90,1934	0/0:28,0:28:84.24:0,84,1852	0/0:23,0:23:66.21:0,66,1513	0/0:28,0:28:78.27:0,78,1844	0/0:19,0:19:57.20:0,57,1289	0/0:33,0:33:99:0,99,2160	0/0:17,0:17:42.14:0,42,992
chr10	99278473	.	A	AG	26848.30	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=5.207;DP=766;FS=0.434;HRun=2;HaplotypeScore=114.4085;InbreedingCoeff=0.9978;MQ=87.47;MQ0=0;MQRankSum=-9.485;QD=39.37;ReadPosRankSum=3.559;VQSLOD=4.4108;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,58:62:99:2296,128,0	1/1:1,7:8:21.04:280,21,0	0/0:32,0:32:90.25:0,90,1083	0/0:21,0:21:57.15:0,57,682	1/1:0,26:26:75.25:1074,75,0	1/1:0,28:28:75.25:1080,75,0	1/1:0,32:32:93.31:1340,93,0	1/1:3,25:28:75.23:1058,75,0	1/1:1,26:27:78.26:1123,78,0	1/1:3,23:26:72.20:997,72,0	1/1:0,13:13:39.13:561,39,0	1/1:2,25:27:72.24:1037,72,0	1/1:1,26:27:75.25:1080,75,0	1/1:2,37:39:99:1426,99,0	1/1:1,36:37:99:1469,102,0	0/0:30,1:31:47.06:0,47,1023	1/1:2,26:28:78.26:1123,78,0	1/1:0,24:24:69.23:994,69,0	1/1:1,15:16:45.12:625,45,0	1/1:1,24:25:63.21:907,63,0	1/1:0,44:44:99:1815,126,0	1/1:1,27:28:69.23:994,69,0	1/1:2,29:31:84.28:1209,84,0	1/1:0,17:17:51.17:734,51,0	1/1:0,28:28:78.26:1123,78,0	1/1:2,28:30:84.28:1210,84,0	1/1:0,23:22:66.22:950,66,0	1/1:0,8:8:24.08:346,24,0
chr10	99278972	.	T	TTTCG	42199.20	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-7.632;DP=724;FS=4.393;HRun=0;HaplotypeScore=121.6752;InbreedingCoeff=0.9646;MQ=78.01;MQ0=0;MQRankSum=-10.129;QD=64.82;ReadPosRankSum=3.451;VQSLOD=7.1887;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,37:41:99:2808,111,0	1/1:1,5:6:18.04:426,18,0	0/0:24,0:24:65.91:0,66,1065	0/0:19,0:19:48.13:0,48,807	1/1:10,19:29:66.07:1556,66,0	1/1:8,16:24:66.18:1649,66,0	1/1:2,21:23:63.22:1694,63,0	1/1:8,26:34:87.30:2247,87,0	1/1:4,22:26:72.25:1869,72,0	1/1:12,15:27:72.14:1718,72,0	1/1:5,13:18:45.14:1136,45,0	1/1:9,20:30:78.25:1941,78,0	1/1:7,22:30:87.30:2149,87,0	1/1:7,29:36:96.31:2386,96,0	1/1:2,29:31:78.27:2045,78,0	0/0:30,0:30:6.94:0,7,1470	1/1:4,29:33:75.23:1931,75,0	1/1:5,22:27:66.22:1719,66,0	1/1:14,8:22:54.01:1023,54,0	1/1:9,13:22:54.17:1333,54,0	1/1:2,30:32:78.18:1966,78,0	1/1:2,19:21:63.21:1612,63,0	1/1:3,27:30:75.21:1922,75,0	1/1:6,31:37:86.75:2172,87,0	1/1:3,6:9:27.09:654,27,0	1/1:2,20:23:66.14:1547,66,0	1/1:7,18:25:66.19:1595,66,0	1/1:4,11:15:42.14:1102,42,0
chr10	99278975	.	C	CG	5188.16	PASS	AB=0.987;AC=34;AF=0.607;AN=56;BaseQRankSum=6.408;DP=674;FS=1.895;HRun=0;HaplotypeScore=193.8884;InbreedingCoeff=-0.2027;MQ=79.79;MQ0=0;MQRankSum=-5.363;QD=8.60;ReadPosRankSum=12.773;VQSLOD=3.1040;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:40:13.58:352,0,14	1/1:6,0:6:15.74:79,16,0	0/0:25,0:25:68.92:0,69,879	0/0:18,0:18:48:0,48,595	0/1:25,1:26:85.61:203,0,86	1/1:19,1:20:6.09:216,6,0	1/1:22,0:22:31.25:219,31,0	0/1:28,0:28:33.74:218,0,34	0/1:25,0:25:24.81:201,0,25	0/1:22,2:24:99:246,0,110	1/1:17,0:17:33.03:177,33,0	1/1:26,0:26:46.22:354,46,0	0/1:28,0:28:66.31:192,0,66	0/1:33,0:33:36.99:257,0,37	1/1:29,0:29:41.81:253,42,0	0/0:28,0:28:84.27:0,84,1160	0/1:29,0:29:12.47:232,0,12	0/1:28,0:28:99:176,0,203	0/1:20,0:20:88.31:88,0,236	0/1:18,0:18:68.82:111,0,69	1/1:31,0:31:29.77:287,30,0	1/1:22,0:22:15.21:224,15,0	0/1:29,0:29:69.34:238,0,69	0/1:34,0:34:24.08:221,0,24	0/1:8,1:9:11.57:99,0,12	0/1:23,0:23:79.73:198,0,80	0/1:25,0:25:99:206,0,152	1/1:11,0:11:30.78:142,31,0
chr10	99279048	.	A	AG	19803.89	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-9.078;DP=623;FS=0.935;HRun=3;HaplotypeScore=83.7991;InbreedingCoeff=0.9637;MQ=97.35;MQ0=0;MQRankSum=-10.897;QD=37.02;ReadPosRankSum=5.347;VQSLOD=4.8813;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,33:37:90.15:1172,90,0	1/1:0,17:17:51.17:713,51,0	0/0:34,0:34:86.88:0,87,1004	0/0:34,0:34:84.21:0,84,955	1/1:1,23:24:66.22:916,66,0	1/1:0,16:16:45.15:630,45,0	1/1:2,28:30:81.27:1134,81,0	1/1:1,22:23:66.22:924,66,0	1/1:1,21:22:63.21:882,63,0	1/1:2,16:18:48.13:651,48,0	1/1:0,18:18:51.17:714,51,0	1/1:1,24:25:60.20:839,60,0	1/1:6,19:25:63.15:827,63,0	1/1:3,26:29:75.25:1050,75,0	1/1:5,19:24:60.18:821,60,0	0/0:20,0:20:60.17:0,60,708	1/1:0,21:21:63.21:875,63,0	1/1:1,16:17:48.16:672,48,0	1/1:2,16:18:54.18:750,54,0	1/1:1,15:16:39.13:546,39,0	1/1:5,25:30:72.22:988,72,0	1/1:1,19:20:54.18:755,54,0	1/1:1,16:17:45.15:626,45,0	1/1:3,21:24:57.19:798,57,0	1/1:0,13:13:39.13:546,39,0	1/1:5,15:20:60.18:796,60,0	1/1:1,28:29:78.26:1092,78,0	1/1:0,2:2:6.02:84,6,0
chr10	99279216	.	TCC	T	8667.26	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-5.547;DP=480;FS=1.053;HRun=10;HaplotypeScore=69.2355;InbreedingCoeff=0.9697;MQ=77.54;MQ0=1;MQRankSum=-0.513;QD=23.81;ReadPosRankSum=5.972;VQSLOD=4.3260;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:54.13:602,54,0	1/1:2,6:8:8.98:100,9,0	0/0:25,0:22:12.62:0,13,349	0/0:13,0:13:14.98:0,15,192	1/1:5,16:21:45.09:496,45,0	1/1:3,19:21:42.11:468,42,0	1/1:2,15:17:36.08:401,36,0	0/0:14,0:23:36.07:0,36,167	1/1:2,15:17:36.08:401,36,0	1/1:0,13:13:39.11:433,39,0	1/1:2,11:13:30.08:334,30,0	1/1:2,19:21:48.13:535,48,0	1/1:2,18:20:45.12:501,45,0	1/1:2,12:14:27.07:300,27,0	1/1:1,16:17:35.68:399,36,0	0/0:10,0:10:24.05:0,24,339	1/1:1,22:23:66.18:735,66,0	0/0:17,0:17:44.67:0,45,630	1/1:11,5:16:24.01:255,24,0	1/1:3,9:12:18.04:200,18,0	1/1:2,15:17:33.08:368,33,0	1/1:4,13:17:36.09:401,36,0	1/1:4,14:18:36.08:401,36,0	1/1:2,18:20:42.11:468,42,0	1/1:2,16:18:30.07:334,30,0	0/0:3,0:15:27.12:0,27,117	1/1:0,17:17:48.13:535,48,0	0/0:3,0:12:9.98:0,10,34
chr10	99282422	.	CAT	C	23488.42	PASS	AB=0.929;AC=45;AF=0.804;AN=56;BaseQRankSum=14.431;DP=768;FS=8.562;HRun=0;HaplotypeScore=131.1234;InbreedingCoeff=0.8880;MQ=84.68;MQ0=2;MQRankSum=-5.454;QD=36.82;ReadPosRankSum=6.731;VQSLOD=6.6290;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:78.26:1148,78,0	1/1:0,16:16:48.16:706,48,0	0/0:29,0:29:78.23:0,78,1412	0/0:25,0:25:63.08:0,63,1123	1/1:0,44:44:99:1716,120,0	1/1:0,20:20:51.17:750,51,0	1/1:1,21:22:54.18:795,54,0	0/0:33,0:33:93.31:0,93,1692	1/1:0,35:35:90.30:1324,90,0	1/1:0,35:35:99:1457,99,0	1/1:1,27:28:69.19:991,69,0	1/1:0,33:33:87.29:1279,87,0	1/1:0,31:31:87.29:1280,87,0	1/1:0,25:25:66.22:970,66,0	1/1:0,34:33:87.29:1280,87,0	0/0:30,0:30:87.30:0,87,1610	1/1:1,33:34:93.31:1369,93,0	1/1:0,18:18:48.16:706,48,0	1/1:1,24:25:72.24:1060,72,0	1/1:0,33:32:90.23:1277,90,0	1/1:0,17:17:45.15:662,45,0	1/1:0,26:26:69.23:1014,69,0	1/1:1,17:18:45.11:638,45,0	1/1:1,22:23:60.20:883,60,0	1/1:0,30:30:81.27:1191,81,0	0/1:36,3:39:20.31:20,0,1722	1/1:0,23:23:66.22:970,66,0	0/0:13,0:13:39.13:0,39,730
chr10	99283085	.	CG	C	23899.73	PASS	AB=0.933;AC=45;AF=0.804;AN=56;BaseQRankSum=9.210;DP=803;FS=3.762;HRun=1;HaplotypeScore=147.7349;InbreedingCoeff=0.9313;MQ=80.97;MQ0=0;MQRankSum=-5.094;QD=36.32;ReadPosRankSum=6.596;VQSLOD=4.0765;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,59:59:99:2096,151,0	1/1:1,13:14:33.11:461,33,0	0/0:21,0:22:55.65:0,56,872	0/0:36,0:36:99:0,104,1468	1/1:0,33:33:93.28:1278,93,0	1/1:0,17:17:48.16:671,48,0	1/1:0,17:17:48.16:671,48,0	0/0:47,0:47:99:0,135,2028	1/1:0,33:33:87.29:1213,87,0	1/1:0,23:23:69.23:963,69,0	1/1:1,24:25:69.23:954,69,0	1/1:0,28:28:72.20:983,72,0	1/1:0,34:34:90.30:1257,90,0	1/1:0,17:17:48.11:648,48,0	1/1:0,42:42:99:1528,111,0	0/0:28,0:28:84.29:0,84,1337	1/1:0,29:29:78.26:1090,78,0	1/1:0,22:22:60.20:834,60,0	1/1:0,31:31:93.27:1227,93,0	1/1:0,32:32:96.29:1321,96,0	1/1:0,29:29:72.24:1006,72,0	1/1:0,29:29:81.27:1131,81,0	1/1:0,25:25:69.23:964,69,0	1/1:0,25:25:75.25:1048,75,0	1/1:0,33:33:90.30:1257,90,0	0/1:26,2:28:2.16:2,0,1114	1/1:0,33:33:93.31:1299,93,0	0/0:12,0:12:35.61:0,36,534
chr10	99283767	.	G	GCA	3480.53	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.895;DP=945;FS=4.048;HRun=0;HaplotypeScore=127.5297;InbreedingCoeff=0.9993;MQ=58.62;MQ0=6;MQRankSum=-5.438;QD=40.95;ReadPosRankSum=-4.230;VQSLOD=3.6986;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,105,1321	0/0:15,0:15:36.12:0,36,463	0/0:41,0:21:45.10:0,45,552	0/0:40,0:25:34.93:0,35,551	0/0:24,0:24:63.19:0,63,796	0/0:24,0:24:57.17:0,57,719	0/0:33,0:33:66.20:0,66,849	1/1:18,28:45:99:1863,114,0	0/0:38,0:39:99:0,105,1342	0/0:48,0:48:99:0,135,1724	0/0:11,0:11:27.09:0,27,347	0/0:29,0:29:72.23:0,72,926	0/0:53,0:53:99:0,138,1760	0/0:41,0:41:99:0,102,1285	0/0:54,0:54:99:0,147,1887	0/0:36,0:36:99:0,99,1260	0/0:34,0:34:73.53:0,74,902	0/0:28,0:28:51.61:0,52,798	0/0:13,0:12:33.07:0,33,395	0/0:23,0:23:60.18:0,60,758	0/0:72,0:72:99:0,174,2197	0/0:33,0:33:81.23:0,81,1042	0/0:20,0:20:54.16:0,54,680	0/0:51,0:50:99:0,135,1722	0/0:25,0:25:54.16:0,54,682	1/1:11,17:28:33.60:1061,34,0	0/0:28,0:28:72.22:0,72,911	1/1:0,11:11:33.11:557,33,0
chr10	99283784	.	T	TAC	2598.78	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=0.968;DP=935;FS=1.673;HRun=0;HaplotypeScore=121.5832;InbreedingCoeff=0.9961;MQ=60.05;MQ0=2;MQRankSum=-5.389;QD=33.32;ReadPosRankSum=-3.014;VQSLOD=4.3041;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,111,1369	0/0:13,0:13:30.10:0,30,378	0/0:50,0:36:78.24:0,78,967	0/0:42,0:28:59.57:0,60,704	0/0:21,0:21:45.14:0,45,566	0/0:22,0:22:54.17:0,54,681	0/0:31,0:31:69.22:0,69,870	1/1:13,34:47:99:1655,102,0	0/0:39,0:40:99:0,99,1210	0/0:48,0:48:99:0,123,1535	0/0:11,0:11:27.09:0,27,341	0/0:31,0:31:84.24:0,84,1033	0/0:49,0:50:99:0,120,1512	0/0:39,0:39:99:0,99,1221	0/0:52,0:52:99:0,138,1709	0/0:36,0:36:90.27:0,90,1120	0/0:30,0:30:72.23:0,72,906	0/0:30,0:30:38.56:0,39,869	0/0:16,0:14:27.09:0,27,340	0/0:25,0:25:57.18:0,57,719	0/0:71,0:71:99:0,137,1930	0/0:34,0:35:93.08:0,93,1134	0/0:25,0:25:57.18:0,57,719	0/0:49,0:48:99:0,123,1519	0/0:23,0:23:48.14:0,48,593	1/1:7,16:23:51.17:841,51,0	0/0:23,0:23:42.13:0,42,530	1/1:4,4:8:18.02:245,18,0
chr10	99285361	.	CA	C	23032.97	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.360;DP=675;FS=12.625;HRun=1;HaplotypeScore=74.4762;InbreedingCoeff=0.9984;MQ=86.17;MQ0=2;MQRankSum=-9.074;QD=38.07;ReadPosRankSum=6.105;VQSLOD=4.1082;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,43:43:99:1549,111,0	1/1:0,8:8:21.07:293,21,0	0/0:22,0:22:60.32:0,60,959	0/0:25,0:25:75.17:0,75,1046	1/1:0,30:30:90.30:1254,90,0	1/1:0,23:23:63.21:880,63,0	1/1:0,23:23:60.20:836,60,0	1/1:0,28:28:78.18:1048,78,0	1/1:0,15:15:41.97:558,42,0	1/1:0,26:26:72.24:1006,72,0	1/1:0,22:22:57.19:793,57,0	1/1:0,23:22:57.19:795,57,0	1/1:0,24:24:66.22:912,66,0	1/1:0,21:21:51.17:712,51,0	1/1:0,32:32:96.32:1340,96,0	0/0:23,0:23:69.24:0,69,1096	1/1:0,28:28:75.25:1047,75,0	1/1:0,22:22:63.21:880,63,0	1/1:0,24:24:72.24:999,72,0	1/1:0,26:26:69.23:964,69,0	1/1:0,33:34:93.05:1267,93,0	1/1:0,20:20:48.16:669,48,0	1/1:0,28:28:78.26:1084,78,0	1/1:0,31:31:90.30:1257,90,0	1/1:1,17:18:45.15:629,45,0	1/1:0,24:23:69.23:964,69,0	1/1:0,21:21:60.20:838,60,0	1/1:0,11:11:33.11:461,33,0
chr10	99285550	.	C	CT	5016.43	PASS	AB=0.661;AC=36;AF=0.643;AN=56;BaseQRankSum=-8.253;DP=538;FS=0.000;HRun=12;HaplotypeScore=67.2353;InbreedingCoeff=0.3254;MQ=75.50;MQ0=0;MQRankSum=1.525;QD=11.80;ReadPosRankSum=1.911;VQSLOD=4.6253;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:30:50.92:0,51,147	0/1:4,4:8:9.84:76,0,10	1/1:15,0:11:7.18:36,7,0	0/1:11,1:11:3.66:4,0,16	0/1:12,13:26:34.88:314,0,35	1/1:6,18:26:6.93:364,7,0	1/1:3,7:10:2.13:182,2,0	0/0:24,0:28:48.72:0,49,339	1/1:3,11:14:24.04:234,24,0	1/1:3,16:21:16.97:307,17,0	0/1:6,15:22:14.91:321,0,15	1/1:3,15:19:32.89:306,33,0	1/1:4,16:21:10.98:255,11,0	1/1:6,11:18:4.94:189,5,0	0/1:9,17:26:40.35:326,0,40	0/0:16,1:17:9.56:0,10,231	0/1:9,20:32:18.80:326,0,19	0/0:6,0:16:21.25:0,21,61	0/1:15,13:28:0.76:193,0,1	1/1:8,13:22:24.66:260,25,0	1/1:2,9:11:15.02:146,15,0	0/1:4,11:16:23.65:149,0,24	1/1:8,16:24:11.14:271,11,0	1/1:4,11:17:8.73:262,9,0	1/1:7,9:16:4.97:196,5,0	0/0:16,0:18:39.80:0,40,274	1/1:8,13:21:14.62:300,15,0	0/0:4,0:4:8.94:0,9,66
chr10	99286337	.	CA	C	5485.92	PASS	AB=0.995;AC=46;AF=0.821;AN=56;BaseQRankSum=9.549;DP=649;FS=5.425;HRun=2;HaplotypeScore=142.0684;InbreedingCoeff=-0.1989;MQ=62.90;MQ0=7;MQRankSum=-1.306;QD=8.45;ReadPosRankSum=10.949;VQSLOD=1.1763;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:39:63.20:372,63,0	1/1:12,2:14:33.93:216,34,0	0/1:18,0:13:67.77:68,0,104	0/1:18,1:13:23.21:55,0,23	1/1:19,0:19:21.62:161,22,0	1/1:20,0:20:25.08:173,25,0	0/1:19,0:15:11.84:123,0,12	0/1:11,0:11:44.14:44,0,57	1/1:27,0:27:65.61:293,66,0	1/1:19,0:19:42.13:168,42,0	0/1:16,0:16:11.69:105,0,12	1/1:18,0:18:44.41:211,44,0	0/1:27,0:27:3.90:197,0,4	0/1:36,0:36:39.17:224,0,39	1/1:28,0:28:74.63:350,75,0	1/1:28,0:28:4.19:206,4,0	1/1:34,0:32:77.27:351,77,0	1/1:32,0:31:13.82:274,14,0	1/1:18,0:15:10.33:109,10,0	1/1:23,0:23:46.06:220,46,0	1/1:44,0:44:64.24:408,64,0	0/1:25,0:25:11.88:167,0,12	1/1:13,2:15:38.42:215,38,0	1/1:22,0:22:10.69:204,11,0	1/1:18,0:18:21.31:162,21,0	0/1:25,0:25:0.05:150,0,0	1/1:27,0:27:31.34:215,31,0	0/1:8,0:8:5.28:43,0,5
chr10	99286474	.	C	CGA	985.45	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.541;DP=900;FS=0.000;HRun=0;HaplotypeScore=108.0121;InbreedingCoeff=0.9976;MQ=61.95;MQ0=66;MQRankSum=2.175;QD=28.16;ReadPosRankSum=1.417;VQSLOD=5.1256;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:54:99:0,132,1848	0/0:15,0:15:30.07:0,30,400	0/0:42,0:20:57.17:0,57,725	0/0:45,0:21:57.11:0,57,690	0/0:30,0:24:57.19:0,57,797	0/0:28,0:25:66.22:0,66,921	0/0:34,0:29:78.22:0,78,1063	0/0:24,0:23:66.21:0,66,909	0/0:38,0:31:93.31:0,93,1302	0/0:40,0:37:99:0,102,1428	0/0:28,0:26:63.21:0,63,880	0/0:22,0:21:51.17:0,51,707	0/0:28,0:27:69.23:0,69,965	0/0:40,0:38:99:0,108,1510	0/0:30,0:24:69.22:0,69,948	0/0:31,0:27:66.22:0,66,924	0/0:48,0:45:99:0,108,1495	1/1:10,25:28:24.51:1079,25,0	0/0:21,0:18:48.16:0,48,671	0/0:25,0:22:60.17:0,60,819	0/0:49,0:41:99:0,102,1408	0/0:29,0:27:72.20:0,72,969	0/0:26,0:24:60.17:0,60,818	0/0:38,0:36:99:0,105,1468	0/0:25,0:21:54.16:0,54,738	0/0:36,0:33:93.31:0,93,1302	0/0:20,0:18:45.15:0,45,630	0/0:14,0:14:42.14:0,42,588
chr10	99286966	.	C	CTCTG	17121.74	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-6.426;DP=598;FS=2.147;HRun=0;HaplotypeScore=99.6581;InbreedingCoeff=0.8181;MQ=67.85;MQ0=2;MQRankSum=0.349;QD=32.86;ReadPosRankSum=4.260;VQSLOD=4.6863;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,1:15:6.02:105,6,0	1/1:3,6:9:12.04:279,12,0	0/0:26,0:19:32.87:0,33,397	0/0:31,0:29:38.26:0,38,592	1/1:2,16:18:18.06:448,18,0	1/1:5,15:20:33.11:821,33,0	1/1:4,19:25:36.12:896,36,0	1/1:30,0:39:54.87:375,55,0	1/1:3,10:13:24.08:597,24,0	1/1:7,21:28:63.18:1393,63,0	1/1:7,8:15:18.06:448,18,0	1/1:4,20:24:33.11:821,33,0	1/1:2,15:20:33.58:784,34,0	1/1:6,17:23:17.16:945,17,0	1/1:6,20:27:42.14:1045,42,0	0/0:20,0:20:39.11:0,39,604	1/1:3,20:23:60.21:1493,60,0	1/1:8,0:16:4.17:21,4,0	1/1:4,9:13:24.08:501,24,0	1/1:4,21:26:39.13:931,39,0	1/1:4,21:27:33.11:786,33,0	1/1:7,19:27:27.01:614,27,0	1/1:5,8:13:6.02:149,6,0	1/1:2,27:31:60.21:1493,60,0	1/1:4,18:23:42.14:1027,42,0	1/1:11,0:21:49.69:517,50,0	1/1:3,14:17:24.08:582,24,0	1/1:1,0:4:3.01:53,3,0
chr10	99289094	.	C	CAGCCTA	3820.48	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.482;DP=617;FS=15.155;HRun=0;HaplotypeScore=127.8886;InbreedingCoeff=0.9911;MQ=72.00;MQ0=1;MQRankSum=-10.305;QD=73.47;ReadPosRankSum=0.069;VQSLOD=3.9312;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,23:42:90.27:2946,90,0	0/0:6,0:6:15.04:0,15,306	0/0:30,0:28:75.26:0,75,1671	0/0:23,0:19:57.19:0,57,1271	0/0:29,0:29:84.26:0,84,1866	0/0:22,0:22:66.21:0,66,1490	0/0:18,0:18:51.17:0,51,1204	0/0:32,0:32:84.28:0,84,1874	0/0:17,0:17:48.16:0,48,1091	0/0:37,0:37:99:0,99,2247	0/0:17,0:17:48.15:0,48,1089	0/0:22,0:22:66.20:0,66,1463	0/0:10,0:10:30.07:0,30,613	0/0:24,0:24:69.24:0,69,1607	0/0:17,0:17:48.16:0,48,1103	0/0:28,0:28:81.26:0,81,1861	0/0:16,0:16:45.15:0,45,1035	1/1:3,6:10:27.08:874,27,0	0/0:28,0:28:75.23:0,75,1613	0/0:24,0:24:66.22:0,66,1477	0/0:20,0:20:54.19:0,54,1234	0/0:24,0:24:63.22:0,63,1490	0/0:20,0:20:57.20:0,57,1348	0/0:17,0:17:51.12:0,51,1088	0/0:18,0:17:54.18:0,54,1234	0/0:24,0:24:72.24:0,72,1654	0/0:24,0:24:72.22:0,72,1548	0/0:18,0:18:54.19:0,54,1277
chr10	99289397	.	G	GTATGA	3625.41	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.507;DP=661;FS=0.564;HRun=0;HaplotypeScore=132.6929;InbreedingCoeff=0.9994;MQ=85.60;MQ0=0;MQRankSum=-9.761;QD=75.53;ReadPosRankSum=0.570;VQSLOD=5.2286;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,2561	0/0:10,0:10:30.10:0,30,688	0/0:22,0:22:63.11:0,63,1297	0/0:23,0:23:66.21:0,66,1361	0/0:23,0:23:66.20:0,66,1430	0/0:24,0:24:69.21:0,69,1446	0/0:29,0:29:84.27:0,84,1888	1/1:2,7:9:27.09:665,27,0	0/0:26,0:26:78.23:0,78,1623	0/0:27,0:27:81.27:0,81,1844	0/0:15,0:15:45.15:0,45,1000	0/0:20,0:20:60.21:0,60,1390	0/0:26,0:26:78.27:0,78,1725	0/0:19,0:19:57.19:0,57,1283	0/0:32,0:32:92.79:0,93,2022	0/0:21,0:21:63.20:0,63,1423	0/0:29,0:29:87.30:0,87,1951	0/0:17,0:17:45.15:0,45,1018	0/0:20,0:20:60.21:0,60,1378	0/0:33,0:33:93.31:0,93,2124	0/0:49,0:49:99:0,147,3226	0/0:19,0:19:57.20:0,57,1328	0/0:15,0:15:45.15:0,45,1017	0/0:25,0:25:69.18:0,69,1498	0/0:24,0:24:72.25:0,72,1657	1/1:0,20:23:66.23:1783,66,0	0/0:22,0:22:66.16:0,66,1426	1/1:1,15:16:45.15:1178,45,0
chr10	99289401	.	GCT	G	1044.27	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.883;DP=653;FS=0.578;HRun=0;HaplotypeScore=95.9905;InbreedingCoeff=0.9991;MQ=84.83;MQ0=0;MQRankSum=-10.523;QD=23.73;ReadPosRankSum=1.108;VQSLOD=4.3806;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,111,2132	0/0:11,0:11:33.10:0,33,604	0/0:23,0:23:60.19:0,60,1054	0/0:20,0:20:57.16:0,57,1023	0/0:22,0:22:66.23:0,66,1275	0/0:22,0:22:60.21:0,60,1159	0/0:29,0:29:84.29:0,84,1612	1/1:1,7:8:24.05:251,24,0	0/0:26,0:26:75.26:0,75,1440	0/0:28,0:28:84.29:0,84,1615	0/0:15,0:15:42.12:0,42,743	0/0:21,0:21:63.20:0,63,1155	0/0:25,0:25:69.24:0,69,1313	0/0:19,0:19:57.20:0,57,1100	0/0:28,0:28:81.27:0,81,1522	0/0:21,0:21:63.21:0,63,1185	0/0:29,0:29:87.30:0,87,1649	0/0:16,0:16:45.15:0,45,868	0/0:20,0:20:57.20:0,57,1096	0/0:34,0:34:99:0,99,1884	0/0:48,0:48:99:0,144,2779	0/0:20,0:20:60.21:0,60,1150	0/0:16,0:16:42.14:0,42,795	0/0:25,0:25:72.25:0,72,1366	0/0:25,0:25:72.25:0,72,1391	1/1:1,20:21:59.97:562,60,0	0/0:22,0:22:66.21:0,66,1240	1/1:0,15:15:44.65:374,45,0
chr10	99289504	.	CCCAT	C	1209.70	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=1.104;DP=627;FS=5.939;HRun=0;HaplotypeScore=136.1749;InbreedingCoeff=0.7805;MQ=66.36;MQ0=8;MQRankSum=2.845;QD=20.50;ReadPosRankSum=-1.502;VQSLOD=2.6950;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:46.16:0,46,605	0/0:7,0:7:15.05:0,15,286	0/0:27,0:14:38.35:0,38,626	0/0:32,0:20:49.52:0,50,736	0/0:26,0:26:66.16:0,66,1221	0/0:20,0:20:41.45:0,41,695	0/0:23,0:23:49.41:0,49,942	1/1:0,15:15:45.02:542,45,0	0/0:22,0:21:38.64:0,39,824	0/1:22,0:21:15.41:15,0,935	0/0:20,0:19:39.13:0,39,719	0/0:22,0:22:51.17:0,51,1003	0/0:27,0:27:38.40:0,38,1028	0/0:23,0:23:51.17:0,51,959	0/0:26,0:26:52.67:0,53,1070	0/0:14,0:14:42.14:0,42,1046	0/0:29,0:29:63.80:0,64,1096	0/0:20,0:20:36.07:0,36,647	0/0:21,0:21:60.18:0,60,1028	0/0:21,0:21:60.02:0,60,967	0/0:40,0:39:67.46:0,67,1171	0/0:22,0:22:49.98:0,50,982	0/0:12,0:12:8.39:0,8,432	0/0:34,0:34:32.56:0,33,1202	0/0:15,0:15:34:0,34,695	1/1:1,18:19:27.15:695,27,0	0/0:30,0:29:81.19:0,81,1414	1/1:1,2:2:6.02:98,6,0
chr10	99289508	.	T	TAC	8139.38	PASS	AB=0.704;AC=38;AF=0.679;AN=56;BaseQRankSum=-6.059;DP=662;FS=3.107;HRun=0;HaplotypeScore=106.9369;InbreedingCoeff=0.1582;MQ=64.35;MQ0=9;MQRankSum=2.444;QD=13.94;ReadPosRankSum=-0.732;VQSLOD=4.2118;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:28.51:161,29,0	1/1:3,5:8:9.03:140,9,0	0/0:27,0:14:2.97:0,3,29	0/0:32,0:20:4.71:0,5,66	0/1:9,15:25:22.82:386,0,23	1/1:7,15:22:14.58:232,15,0	1/1:11,14:27:21.50:283,22,0	0/1:17,0:17:0:1,0,0	0/1:7,17:23:63.54:340,0,64	1/1:5,16:21:16.19:588,16,0	1/1:7,14:20:22.85:305,23,0	0/1:11,12:23:36.18:359,0,36	1/1:10,17:28:1.25:474,1,0	1/1:4,19:23:39.13:607,39,0	1/1:9,18:27:32:511,32,0	0/0:16,0:16:33.09:0,33,375	1/1:14,16:32:12.22:427,12,0	1/1:20,0:20:14.47:94,14,0	1/1:11,10:21:29.99:362,30,0	0/1:9,14:23:6.77:346,0,7	1/1:13,29:41:36.12:560,36,0	0/1:11,13:24:70.82:340,0,71	0/1:7,6:15:2.08:128,0,2	1/1:11,26:38:19.64:730,20,0	0/1:4,11:15:7.52:346,0,8	0/1:21,0:20:29.47:29,0,45	0/1:14,15:28:4.51:389,0,5	0/0:3,0:2:4.99:0,5,18
chr10	99289521	.	A	ACGCACGCG	1980.58	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.796;DP=699;FS=3.267;HRun=0;HaplotypeScore=186.1424;InbreedingCoeff=0.9365;MQ=57.51;MQ0=13;MQRankSum=-5.475;QD=31.94;ReadPosRankSum=1.870;VQSLOD=3.4193;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,24:41:31.28:1263,31,0	0/0:9,0:9:14.67:0,15,308	0/0:30,0:11:24.08:0,24,436	0/0:30,0:14:29.19:0,29,752	0/0:25,0:25:54.08:0,54,1001	0/0:24,0:24:36.11:0,36,665	0/0:25,0:25:41.83:0,42,690	0/0:25,0:24:60.11:0,60,1102	0/0:27,0:26:51.13:0,51,883	0/0:24,0:23:63.18:0,63,1070	0/0:19,0:18:36.07:0,36,496	0/0:23,0:23:54.15:0,54,968	0/0:28,0:28:51.33:0,51,888	0/0:25,0:24:54.15:0,54,828	0/0:25,0:25:42.13:0,42,685	0/0:16,0:16:48.16:0,48,1227	0/0:33,0:33:60.15:0,60,1075	1/1:2,14:21:21.06:838,21,0	0/0:26,0:26:60.67:0,61,1039	0/0:24,0:24:53.70:0,54,1022	0/0:51,0:50:87.21:0,87,1517	0/0:26,0:26:60.11:0,60,1093	0/0:15,0:15:30.07:0,30,512	0/0:39,0:39:78.23:0,78,1292	0/0:18,0:18:45.15:0,45,831	0/0:19,0:18:48.16:0,48,1078	0/0:28,0:27:65.84:0,66,1234	0/0:3,0:2:6.02:0,6,141
chr10	99289529	.	ACACACT	A	703.03	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-1.503;DP=691;FS=6.344;HRun=0;HaplotypeScore=164.3205;InbreedingCoeff=0.5858;MQ=58.64;MQ0=12;MQRankSum=-2.698;QD=5.09;ReadPosRankSum=-5.309;VQSLOD=0.2937;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:40:76.51:77,0,403	0/0:9,0:9:14.70:0,15,247	0/1:28,0:11:3.12:3,0,189	0/0:28,0:14:26.30:0,26,492	0/0:24,0:24:48.12:0,48,1084	0/0:23,0:23:27.04:0,27,562	0/0:25,0:25:11.99:0,12,603	1/1:25,0:24:12.86:177,13,0	0/0:30,0:29:61.91:0,62,1228	0/0:25,0:24:68.96:0,69,1252	0/0:17,0:16:23.82:0,24,564	0/0:21,0:21:48.14:0,48,1126	0/0:26,0:26:45.09:0,45,1132	0/0:25,0:24:54.12:0,54,1250	0/0:23,0:23:42.12:0,42,1038	0/0:18,0:18:54.10:0,54,1127	0/0:35,0:35:65.20:0,65,1257	0/1:19,0:19:32.92:33,0,221	0/0:24,0:24:22.93:0,23,844	0/0:25,0:25:50.93:0,51,999	0/0:53,0:53:98.90:0,99,1705	0/0:23,0:23:48.14:0,48,1243	0/0:13,0:13:21.04:0,21,409	0/0:38,0:38:75.18:0,75,1759	0/0:19,0:19:42.09:0,42,900	1/1:16,5:20:9.02:401,9,0	0/0:29,0:28:52.36:0,52,1123	1/1:3,2:4:12.01:159,12,0
chr10	99289925	.	GCTAC	G	2611.46	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.557;DP=592;FS=2.508;HRun=0;HaplotypeScore=117.9614;InbreedingCoeff=0.9873;MQ=87.14;MQ0=0;MQRankSum=-10.271;QD=47.48;ReadPosRankSum=-1.241;VQSLOD=3.8983;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:22.26:0,22,1169	0/0:9,0:9:27.09:0,27,780	0/0:27,0:27:81.27:0,81,2167	0/0:19,0:19:47.94:0,48,1099	0/0:31,0:31:93.29:0,93,2547	0/0:29,0:29:87.30:0,87,2505	0/0:17,0:16:51.16:0,51,1370	1/1:8,26:34:87.27:1626,87,0	0/0:14,0:14:42.14:0,42,1164	0/0:23,0:23:69.23:0,69,1919	0/0:18,0:18:53.85:0,54,1481	0/0:17,0:17:51.14:0,51,1350	0/0:22,0:22:57.20:0,57,1636	0/0:23,0:23:69.22:0,69,1942	0/0:20,0:20:60.19:0,60,1673	0/0:20,0:20:60.20:0,60,1665	0/0:24,0:24:69.19:0,69,1872	0/0:18,0:18:32.12:0,32,836	0/0:28,0:28:84.26:0,84,2299	0/0:30,0:30:87.28:0,87,2427	0/0:19,0:19:57.20:0,57,1650	0/0:24,0:24:72.23:0,72,2018	0/0:24,0:24:72.25:0,72,2087	0/0:18,0:18:54.19:0,54,1549	0/0:17,0:17:51.18:0,51,1473	1/1:3,13:16:48.15:888,48,0	0/0:20,0:20:60.21:0,60,1735	1/1:0,5:5:12.04:236,12,0
chr10	99289943	.	G	GA	1040.18	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=5.997;DP=589;FS=2.176;HRun=8;HaplotypeScore=93.0274;InbreedingCoeff=0.8581;MQ=88.32;MQ0=0;MQRankSum=-5.920;QD=14.65;ReadPosRankSum=-2.907;VQSLOD=3.2883;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:25:64.10:0,64,561	0/0:11,0:11:33.02:0,33,302	0/0:26,0:26:59.98:0,60,535	0/1:17,0:17:3.97:4,0,133	0/0:34,0:34:92.91:0,93,873	0/0:24,0:24:69.04:0,69,632	0/0:14,0:13:36:0,36,323	1/1:15,19:34:54.16:623,54,0	0/0:14,0:14:39.02:0,39,357	0/0:22,0:22:63.03:0,63,576	0/0:19,0:19:39:0,39,352	0/0:15,0:15:45.02:0,45,412	0/0:27,0:27:72.04:0,72,659	0/0:23,0:23:66.03:0,66,604	0/0:19,0:19:51.01:0,51,462	0/0:24,0:25:65.05:0,65,579	0/0:19,0:19:54.03:0,54,494	0/0:19,0:19:57.03:0,57,521	0/0:22,0:22:60.03:0,60,549	0/0:26,0:26:66.01:0,66,595	0/0:21,0:21:60.02:0,60,545	0/0:27,0:27:72.04:0,72,659	0/0:25,0:25:72.04:0,72,659	0/0:15,0:16:41.05:0,41,363	0/0:19,0:19:54.02:0,54,490	1/1:3,12:15:39.12:449,39,0	0/0:26,0:26:75.02:0,75,681	1/1:2,3:5:9.03:104,9,0
chr10	99290422	.	GTTCT	G	21779.81	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=13.773;DP=663;FS=0.000;HRun=0;HaplotypeScore=117.9834;InbreedingCoeff=0.9879;MQ=77.21;MQ0=3;MQRankSum=-5.604;QD=46.84;ReadPosRankSum=4.758;VQSLOD=5.5049;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,3652	1/1:0,12:12:33.11:639,33,0	0/0:23,0:23:66.18:0,66,1351	0/0:17,0:16:41.28:0,41,928	1/1:0,33:32:90.31:1729,90,0	1/1:0,26:26:66.23:1279,66,0	1/1:1,26:27:69.24:1327,69,0	0/0:32,0:32:96.32:0,96,2526	1/1:1,22:23:45.15:860,45,0	1/1:0,24:24:69.17:1220,69,0	1/1:0,23:22:63.13:1149,63,0	1/1:1,19:20:48.16:929,48,0	1/1:0,12:12:30.10:581,30,0	1/1:0,30:30:69.24:1323,69,0	1/1:1,18:19:45.15:871,45,0	0/0:23,0:23:40.23:0,40,1683	1/1:0,28:28:71.99:1391,72,0	0/0:15,0:15:42.14:0,42,1151	1/1:0,13:13:36.07:640,36,0	1/1:0,34:34:99:1734,99,0	1/1:2,21:22:39.13:729,39,0	1/1:0,24:24:66.23:1270,66,0	1/1:0,25:25:59.98:1153,60,0	1/1:2,26:28:54.16:1046,54,0	1/1:0,16:16:39.13:755,39,0	0/0:21,1:22:8.06:0,8,1637	1/1:1,24:25:60.21:1155,60,0	0/0:18,0:18:54.16:0,54,1334
chr10	99290864	.	GT	G	65.22	PASS	AB=0.629;AC=1;AF=0.018;AN=56;BaseQRankSum=7.258;DP=809;FS=0.000;HRun=4;HaplotypeScore=139.9262;InbreedingCoeff=0.0174;MQ=67.12;MQ0=9;MQRankSum=-4.641;QD=1.48;ReadPosRankSum=-0.931;VQSLOD=-0.5461;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,26:42:17.17:140,0,17	0/0:21,0:21:54.18:0,54,751	0/0:41,1:17:27.57:0,28,358	0/0:46,0:31:32.40:0,32,600	0/0:28,0:28:75.23:0,75,1014	0/0:18,0:17:51.17:0,51,704	0/0:27,1:28:48.46:0,48,1074	0/0:43,0:43:99:0,101,1499	0/0:29,0:29:75.25:0,75,1041	0/0:33,0:33:96.32:0,96,1337	0/0:20,0:20:60.19:0,60,817	0/0:24,0:24:72.23:0,72,986	0/0:23,0:23:69.20:0,69,922	0/0:22,0:22:63.20:0,63,856	0/0:31,0:31:87.27:0,87,1179	0/0:27,0:27:78.26:0,78,1092	0/0:34,0:34:93.28:0,93,1277	0/0:26,0:26:69.53:0,70,942	0/0:28,0:28:74.92:0,75,1014	0/0:33,0:32:96.29:0,96,1288	0/0:21,0:21:57.19:0,57,790	0/0:27,0:27:81.27:0,81,1114	0/0:26,0:26:75.24:0,75,1016	0/0:36,0:36:99:0,102,1377	0/0:32,0:32:90.29:0,90,1240	0/0:35,0:34:99:0,99,1321	0/0:25,0:25:75.24:0,75,1021	0/0:7,0:6:15.02:0,15,175
chr10	99290874	.	GT	G	12229.22	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=0.747;DP=782;FS=5.932;HRun=9;HaplotypeScore=100.7216;InbreedingCoeff=0.9330;MQ=67.56;MQ0=8;MQRankSum=-2.533;QD=19.17;ReadPosRankSum=4.508;VQSLOD=4.7944;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:39:4.54:0,5,155	1/1:3,13:16:35.93:329,36,0	0/0:35,1:13:29.77:0,30,268	0/0:39,0:26:29.93:0,30,320	1/1:2,28:30:72.02:658,72,0	1/1:1,18:18:48.01:439,48,0	1/1:4,22:26:60.03:549,60,0	1/1:10,0:36:47.53:139,48,0	1/1:5,24:29:39.50:526,39,0	1/1:8,30:38:86.96:777,87,0	1/1:2,18:20:51.02:467,51,0	1/1:3,20:23:63.02:572,63,0	1/1:2,23:25:63.03:577,63,0	1/1:0,19:19:57.03:522,57,0	1/1:5,27:33:68.06:610,68,0	0/0:27,0:27:69.21:0,69,796	1/1:1,34:35:84.05:769,84,0	1/1:5,19:24:48.02:439,48,0	1/1:8,19:27:53.94:476,54,0	1/1:6,26:31:69.01:631,69,0	1/1:2,17:19:39.02:357,39,0	1/1:5,19:24:54.01:494,54,0	1/1:1,24:25:66.03:604,66,0	1/1:3,32:35:84.04:769,84,0	1/1:2,28:30:78.04:714,78,0	1/1:8,1:36:43.67:162,44,0	1/1:5,26:31:69.02:632,69,0	1/1:1,0:4:6.11:18,6,0
chr10	99291583	.	G	GTTA	27710.21	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=11.697;DP=590;FS=2.386;HRun=0;HaplotypeScore=187.3104;InbreedingCoeff=0.9557;MQ=66.19;MQ0=0;MQRankSum=-14.991;QD=56.90;ReadPosRankSum=1.577;VQSLOD=5.5923;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,2177	1/1:0,14:15:42.14:967,42,0	0/0:17,0:17:51.17:0,51,865	0/0:16,0:16:39.12:0,39,645	1/1:0,26:25:51.08:843,51,0	1/1:0,11:13:33.11:761,33,0	1/1:0,18:20:54.18:1165,54,0	1/1:1,26:27:75.26:1734,75,0	1/1:1,18:20:57.20:1287,57,0	1/1:0,31:33:93.29:2066,93,0	1/1:0,18:19:51.17:962,51,0	1/1:2,20:23:69.22:1494,69,0	1/1:0,19:19:48.16:1081,48,0	1/1:0,16:16:42.14:939,42,0	1/1:2,30:32:84.29:1878,84,0	0/0:30,0:30:90.29:0,90,1618	1/1:0,18:19:48.16:1100,48,0	1/1:0,3:4:6.02:139,6,0	1/1:0,11:11:33.11:764,33,0	1/1:0,24:25:72.24:1437,72,0	1/1:0,13:13:33.11:664,33,0	1/1:0,24:24:67.11:1421,67,0	1/1:0,23:22:60.20:1161,60,0	1/1:1,18:21:29.84:642,30,0	1/1:1,25:26:75.25:1647,75,0	1/1:0,24:24:72.25:1641,72,0	1/1:0,29:28:75.26:1711,75,0	1/1:0,3:3:9.03:207,9,0
chr10	99291744	.	G	GTC	26742.39	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-0.136;DP=699;FS=0.000;HRun=0;HaplotypeScore=124.1674;InbreedingCoeff=0.9986;MQ=77.13;MQ0=4;MQRankSum=-7.850;QD=46.19;ReadPosRankSum=4.807;VQSLOD=6.0048;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,1457	1/1:0,8:8:24.08:422,24,0	0/0:25,0:25:57.05:0,57,764	0/0:32,0:32:81.26:0,81,1113	1/1:4,27:31:75.26:1353,75,0	1/1:2,11:13:27.09:495,27,0	1/1:3,19:23:57.20:1041,57,0	1/1:5,22:26:60.21:1075,60,0	1/1:2,26:27:78.27:1428,78,0	1/1:10,30:40:99:1784,100,0	1/1:1,20:21:54.19:990,54,0	1/1:3,28:31:78.27:1428,78,0	1/1:2,25:26:72.25:1309,72,0	1/1:1,19:19:51.17:934,51,0	1/1:2,27:29:78.27:1410,78,0	0/0:25,0:25:72.24:0,72,1030	1/1:2,21:23:57.20:1045,57,0	1/1:1,17:18:51.17:910,51,0	1/1:3,15:20:51.14:872,51,0	1/1:0,32:31:93.32:1686,93,0	1/1:2,23:26:66.23:1210,66,0	1/1:5,24:28:72.25:1319,72,0	1/1:1,27:28:75.26:1374,75,0	1/1:0,17:17:39.13:714,39,0	1/1:6,18:24:60.19:1064,60,0	1/1:4,23:29:78.24:1361,78,0	1/1:5,21:25:60.20:1079,60,0	1/1:0,8:8:24.08:440,24,0
chr10	99292681	.	TC	T	701.53	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.796;DP=654;FS=0.854;HRun=1;HaplotypeScore=106.5689;InbreedingCoeff=0.9974;MQ=94.36;MQ0=0;MQRankSum=-2.298;QD=30.50;ReadPosRankSum=1.780;VQSLOD=3.4856;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.22:0,66,1034	0/0:10,0:10:30.09:0,30,456	0/0:27,0:27:78.23:0,78,1171	0/0:36,0:35:84.38:0,84,1495	0/0:25,0:25:75.24:0,75,1148	0/0:25,0:25:75.14:0,75,1119	0/0:21,0:21:63.21:0,63,997	0/0:29,0:29:87.30:0,87,1379	0/0:30,0:30:84.26:0,84,1285	0/0:28,0:28:81.27:0,81,1258	0/0:16,0:16:45.06:0,45,660	0/0:25,0:25:75.26:0,75,1182	0/0:21,0:21:63.20:0,63,966	0/0:27,0:27:81.26:0,81,1270	0/0:30,0:30:87.25:0,87,1317	0/0:33,0:33:99:0,99,1546	0/0:29,0:29:78.27:0,78,1236	1/1:0,23:23:57.19:796,57,0	0/0:14,0:14:39.11:0,39,591	0/0:26,0:26:75.21:0,75,1129	0/0:22,0:22:66.16:0,66,1000	0/0:22,0:22:63.20:0,63,979	0/0:17,0:17:45.15:0,45,714	0/0:18,0:18:51.17:0,51,802	0/0:18,0:18:51.17:0,51,814	0/0:20,0:20:60.20:0,60,959	0/0:31,0:31:84.27:0,84,1305	0/0:8,0:8:24.08:0,24,383
chr10	99292754	.	G	GTGTGTGTGTGTATGTGTGTGTT	16310.48	PASS	AB=0.885;AC=39;AF=0.696;AN=56;BaseQRankSum=-1.284;DP=727;FS=8.409;HRun=0;HaplotypeScore=320.8332;InbreedingCoeff=-0.0599;MQ=44.87;MQ0=16;MQRankSum=-3.555;QD=24.38;ReadPosRankSum=0.690;VQSLOD=1.5972;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:27:73.30:73,0,242	0/1:15,0:14:7.04:174,0,7	0/0:27,0:6:6:0,6,54	0/0:29,0:5:2.98:0,3,22	1/1:24,0:24:36.95:490,37,0	1/1:24,0:23:36.90:747,37,0	1/1:34,0:34:47.90:623,48,0	0/1:41,0:32:99:564,0,113	0/1:14,4:32:14.19:1045,0,14	1/1:29,0:28:62.86:2392,63,0	1/1:5,10:24:10.57:111,11,0	0/1:40,0:40:9.99:1102,0,10	1/1:25,0:25:26.02:671,26,0	1/1:37,0:38:33.25:1564,33,0	1/1:29,0:29:12.85:769,13,0	0/1:30,0:30:49.20:49,0,1597	1/1:30,0:30:52.17:1122,52,0	0/1:12,0:11:78.81:335,0,79	1/1:16,0:16:2.12:705,2,0	1/1:4,4:20:20.93:419,21,0	0/1:36,0:34:43.58:390,0,44	0/1:4,4:25:0.28:399,0,0	0/1:3,6:16:18.94:31,0,19	1/1:7,4:21:0.50:46,1,0	1/1:8,4:27:3.60:322,4,0	0/1:26,0:25:99:952,0,125	1/1:4,13:26:15.39:1215,15,0	0/0:2,0:2:2.99:0,3,23
chr10	99293416	.	CATCT	C	210.24	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.637;DP=611;FS=1.490;HRun=0;HaplotypeScore=124.9278;InbreedingCoeff=0.7972;MQ=55.99;MQ0=8;MQRankSum=-3.224;QD=17.52;ReadPosRankSum=1.244;VQSLOD=3.5653;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:15:4.29:0,4,40	0/0:5,0:5:15.05:0,15,350	0/0:16,0:10:15.02:0,15,265	0/0:14,0:11:17.85:0,18,365	0/0:19,0:19:48.16:0,48,1163	0/0:23,0:22:63.22:0,63,1586	0/0:7,0:7:9.03:0,9,190	0/0:32,0:31:72.20:0,72,1701	0/0:31,0:31:66.23:0,66,1637	0/0:31,0:30:66.23:0,66,1642	0/0:28,0:28:72.23:0,72,1709	0/0:23,0:23:57.18:0,57,1360	0/0:31,0:31:78.27:0,78,1861	0/0:12,0:12:30.10:0,30,710	0/0:23,0:23:51.18:0,51,1235	0/0:19,0:19:48.16:0,48,1175	0/0:27,0:27:51.75:0,52,1167	1/1:6,5:12:20.80:302,21,0	0/0:21,0:20:47.73:0,48,1156	0/0:44,0:43:99:0,105,2527	0/0:9,0:9:21.07:0,21,506	0/0:17,0:15:42.14:0,42,1025	0/0:30,0:29:81.28:0,81,2004	0/0:17,0:16:33.10:0,33,779	0/0:17,0:15:36.11:0,36,856	0/0:31,0:31:72.25:0,72,1790	0/0:28,0:28:72.25:0,72,1760	0/0:28,0:28:78.23:0,78,1770
chr10	99293450	.	CATCT	C	1957.68	PASS	AB=0.739;AC=12;AF=0.240;AN=50;BaseQRankSum=-1.147;DP=613;FS=3.770;HRun=0;HaplotypeScore=150.0182;InbreedingCoeff=0.6205;MQ=53.05;MQ0=13;MQRankSum=2.011;QD=13.50;ReadPosRankSum=0.908;VQSLOD=3.3152;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,6:13:3.35:145,3,0	0/0:7,0:7:15.05:0,15,345	./.	./.	0/0:19,0:19:18.06:0,18,421	0/0:19,0:22:29.95:0,30,448	0/0:11,0:10:9.01:0,9,125	./.	0/0:29,0:29:42.14:0,42,906	0/0:21,0:24:33.02:0,33,458	0/0:26,0:28:7.45:0,7,167	0/0:18,0:18:6.02:0,6,140	1/1:21,14:35:41.97:646,42,0	0/0:16,0:16:21.07:0,21,479	0/0:27,0:27:42.12:0,42,915	1/1:8,11:19:27.09:415,27,0	0/0:25,0:28:24.07:0,24,377	1/1:10,0:12:0.40:6,0,0	0/0:19,0:19:21.02:0,21,282	0/0:35,0:40:41.15:0,41,584	0/0:11,0:16:20.09:0,20,297	1/1:9,6:13:9.03:138,9,0	0/1:22,12:33:15.40:678,0,15	0/1:11,6:15:20.67:83,0,21	0/0:11,0:19:35.94:0,36,572	0/0:27,0:27:27.09:0,27,593	0/0:27,0:27:33.11:0,33,756	0/0:27,0:27:36.12:0,36,815
chr10	99293523	.	C	CATCT	26022.66	PASS	AB=0.800;AC=49;AF=0.875;AN=56;BaseQRankSum=1.628;DP=662;FS=4.637;HRun=0;HaplotypeScore=215.1460;InbreedingCoeff=0.8786;MQ=50.42;MQ0=0;MQRankSum=-5.679;QD=43.30;ReadPosRankSum=1.849;VQSLOD=4.9827;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:15:14.79:189,15,0	1/1:3,5:8:15.05:369,15,0	0/0:23,0:20:31.55:0,32,479	0/0:5,0:5:15.04:0,15,228	1/1:8,15:24:33.11:757,33,0	1/1:6,10:16:30.10:723,30,0	1/1:4,10:13:18.06:411,18,0	1/1:16,14:28:42.10:860,42,0	1/1:13,21:34:90.26:1877,90,0	1/1:10,16:26:60.19:1357,60,0	1/1:13,15:28:35.74:809,36,0	1/1:5,14:20:45.12:995,45,0	1/1:12,33:45:99:2328,99,0	1/1:5,10:15:30.10:662,30,0	1/1:10,22:32:78.23:1678,78,0	0/0:32,0:32:81.26:0,81,1352	1/1:11,12:23:32.76:680,33,0	0/1:9,3:12:1.23:228,0,1	1/1:5,12:18:42.11:942,42,0	1/1:12,24:36:75.26:1705,75,0	1/1:3,16:19:26.95:587,27,0	1/1:6,13:19:36.12:807,36,0	1/1:10,15:25:45.15:1059,45,0	1/1:6,9:15:15.82:379,16,0	1/1:8,22:30:72.24:1572,72,0	1/1:10,25:37:93.32:2251,93,0	1/1:13,23:36:93.25:2062,93,0	1/1:13,8:21:30.10:737,30,0
chr10	99293561	.	CTATG	C	1061.51	PASS	AB=0.945;AC=11;AF=0.196;AN=56;BaseQRankSum=-5.967;DP=767;FS=2.528;HRun=0;HaplotypeScore=310.5886;InbreedingCoeff=-0.1415;MQ=48.69;MQ0=5;MQRankSum=-0.643;QD=3.98;ReadPosRankSum=-7.072;VQSLOD=0.8498;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:16:0.72:2,1,0	0/0:10,0:10:23.98:0,24,313	0/0:12,0:4:9.02:0,9,139	0/0:16,0:6:12.03:0,12,160	0/0:29,0:29:50.66:0,51,609	0/0:26,0:26:72.25:0,72,1766	0/1:10,4:12:99:110,0,121	0/1:30,3:26:99:251,0,423	0/0:36,0:36:54.12:0,54,626	0/1:28,0:27:99:179,0,653	0/0:35,0:35:54.80:0,55,636	0/0:26,0:26:38.53:0,39,511	0/1:39,2:42:99:151,0,585	0/0:17,0:17:19.48:0,19,252	0/0:30,0:30:52.49:0,52,638	0/0:35,0:35:99:0,102,2372	0/1:29,2:30:99:148,0,282	0/0:19,0:19:2.61:0,3,284	0/1:18,0:17:51.72:52,0,375	0/0:50,0:50:64.77:0,65,770	0/1:26,1:27:99:189,0,312	0/0:27,0:27:37.06:0,37,557	0/0:28,0:28:55.66:0,56,626	0/1:20,0:19:15.19:15,0,282	0/0:34,0:34:65.93:0,66,835	0/1:36,2:38:99:105,0,908	0/0:49,0:49:88.84:0,89,1295	0/0:21,0:20:44.40:0,44,653
chr10	99293565	.	G	GTATC	20724.65	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-2.393;DP=803;FS=10.358;HRun=0;HaplotypeScore=249.9631;InbreedingCoeff=0.8963;MQ=50.26;MQ0=5;MQRankSum=-2.743;QD=29.95;ReadPosRankSum=-0.136;VQSLOD=3.3449;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:20:0.29:0,0,1	1/1:5,5:11:24.05:461,24,0	0/0:11,0:3:6.02:0,6,102	0/0:18,0:8:7.73:0,8,108	1/1:8,22:32:36.11:847,36,0	0/0:27,0:27:69.14:0,69,1126	1/1:14,1:12:18.03:303,18,0	1/1:38,0:32:13.99:707,14,0	1/1:19,19:38:47.92:1030,48,0	1/1:9,17:28:72.20:1374,72,0	1/1:10,26:36:44.75:1071,45,0	1/1:12,14:27:38.88:767,39,0	1/1:31,9:41:54.18:1106,54,0	1/1:6,11:19:21.07:484,21,0	1/1:13,17:30:38.91:919,39,0	0/0:35,0:35:90.23:0,90,1368	1/1:25,6:30:35.65:582,36,0	1/1:4,17:21:26.76:610,27,0	1/1:15,3:17:21.05:384,21,0	1/1:16,34:54:44.94:966,45,0	1/1:19,11:30:39.09:732,39,0	1/1:5,23:28:39.12:924,39,0	1/1:13,16:30:38.84:921,39,0	1/1:6,15:21:23.77:549,24,0	1/1:13,22:36:57.15:1265,57,0	1/1:18,16:34:87.29:1840,87,0	1/1:19,29:48:90.07:2047,90,0	1/1:10,14:23:42.43:835,42,0
chr10	99294927	.	AAAAC	A	23109.90	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=5.079;DP=737;FS=7.151;HRun=0;HaplotypeScore=136.0506;InbreedingCoeff=0.9987;MQ=69.79;MQ0=2;MQRankSum=-3.632;QD=37.82;ReadPosRankSum=4.616;VQSLOD=4.4062;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:84.29:0,84,1985	1/1:0,10:10:27.09:456,27,0	0/0:32,0:30:58.08:0,58,1268	0/0:30,0:29:40.51:0,41,933	1/1:4,22:26:60.16:984,60,0	1/1:3,26:29:75.26:1268,75,0	1/1:1,21:22:51.17:862,51,0	1/1:7,21:28:63.20:1029,63,0	1/1:2,21:22:57.10:964,57,0	1/1:8,23:31:66.23:1109,66,0	1/1:6,20:26:54.18:913,54,0	1/1:1,14:15:42.14:710,42,0	1/1:2,28:30:75.26:1268,75,0	1/1:5,16:21:39.13:659,39,0	1/1:4,30:34:78.27:1319,78,0	0/0:28,0:28:69.24:0,69,1717	1/1:6,24:30:63.22:1065,63,0	1/1:6,16:22:48.15:811,48,0	1/1:9,10:18:30.10:506,30,0	1/1:8,28:35:78.23:1289,78,0	1/1:10,34:44:81.23:1339,81,0	1/1:3,15:18:42.10:679,42,0	1/1:6,20:26:60.21:1014,60,0	1/1:3,21:24:57.20:964,57,0	1/1:3,8:11:24.08:406,24,0	1/1:3,36:39:99:1721,105,0	1/1:7,27:34:78.27:1318,78,0	1/1:3,10:13:27.09:457,27,0
chr10	99295393	.	A	AC	2008.06	PASS	AB=0.960;AC=9;AF=0.161;AN=56;BaseQRankSum=-2.033;DP=530;FS=22.701;HRun=4;HaplotypeScore=80.4164;InbreedingCoeff=0.6929;MQ=84.28;MQ0=2;MQRankSum=-0.907;QD=20.92;ReadPosRankSum=-1.570;VQSLOD=1.8428;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:66.22:902,66,0	0/0:3,0:3:6.02:0,6,68	0/0:20,0:19:0.21:0,0,245	0/1:23,1:21:22.29:22,0,196	0/0:20,0:20:57.16:0,57,645	0/0:25,0:25:69.18:0,69,772	0/0:24,0:24:72.21:0,72,815	1/1:6,11:17:30.05:390,30,0	0/0:19,0:19:54.14:0,54,602	0/0:16,0:16:39.11:0,39,442	0/0:8,0:8:24.07:0,24,272	0/0:23,0:23:69.20:0,69,782	0/0:11,0:11:27.06:0,27,295	0/0:23,0:23:63.16:0,63,704	0/0:22,0:22:63.13:0,63,686	0/0:24,0:24:66.17:0,66,738	0/0:34,0:34:99:0,99,1122	0/0:19,0:19:57.16:0,57,646	0/0:15,0:15:36.10:0,36,408	0/0:14,0:14:39.08:0,39,421	0/0:23,0:23:60.16:0,60,669	0/0:10,0:10:27.07:0,27,298	0/0:9,0:9:24.06:0,24,264	0/0:27,0:27:75.20:0,75,841	0/0:18,0:18:48.13:0,48,543	1/1:3,20:23:1.11:760,1,0	0/0:26,0:26:75.21:0,75,849	1/1:4,0:4:6.02:80,6,0
chr10	99296166	.	C	CAG	6634.54	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-3.024;DP=481;FS=0.761;HRun=0;HaplotypeScore=90.1561;InbreedingCoeff=0.8149;MQ=75.69;MQ0=10;MQRankSum=-4.089;QD=16.22;ReadPosRankSum=-0.262;VQSLOD=4.7947;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:29:50.69:379,51,0	1/1:9,0:9:21.47:234,21,0	0/0:21,0:14:23.06:0,23,333	0/0:41,0:23:42.01:0,42,372	1/1:3,18:22:23.56:230,24,0	1/1:1,7:8:11.93:137,12,0	1/1:0,15:15:17.70:320,18,0	1/1:4,0:16:33.33:255,33,0	1/1:2,13:15:14.39:187,14,0	1/1:1,20:21:59.98:711,60,0	1/1:1,2:9:5.88:36,6,0	1/1:18,3:21:47.98:572,48,0	1/1:0,18:19:15:170,15,0	1/1:2,9:11:8.91:101,9,0	1/1:0,17:17:15.03:255,15,0	0/0:9,0:9:20.97:0,21,278	1/1:3,19:22:20.65:344,21,0	1/1:1,0:17:31.04:233,31,0	1/1:0,10:10:29.98:413,30,0	1/1:1,20:21:32.92:473,33,0	1/1:0,14:15:9.03:182,9,0	1/1:3,20:23:18.33:317,18,0	1/1:1,16:17:12.04:220,12,0	1/1:2,17:19:9.03:182,9,0	1/1:1,12:14:6.01:64,6,0	1/1:1,0:16:41.81:317,42,0	1/1:1,10:12:9.03:175,9,0	1/1:0,0:7:17.86:129,18,0
chr10	99296180	.	TGAGAGAGAGA	T	1381.81	PASS	AB=0.926;AC=25;AF=0.595;AN=42;BaseQRankSum=3.829;DP=385;FS=60.456;HRun=0;HaplotypeScore=110.2219;InbreedingCoeff=0.5101;MQ=62.93;MQ0=20;MQRankSum=2.760;QD=8.53;ReadPosRankSum=0.031;VQSLOD=-0.3839;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,1:25:58.38:160,0,58	1/1:5,0:5:3.01:38,3,0	./.	0/0:37,0:18:0.94:0,1,2	./.	./.	0/0:13,0:13:10.01:0,10,136	0/0:28,0:27:35.42:0,35,599	1/1:13,1:14:8.82:166,9,0	1/1:9,0:9:3.99:122,4,0	1/1:9,0:9:6.01:91,6,0	1/1:6,7:12:5.90:171,6,0	1/1:11,0:11:0.47:1,0,0	./.	1/1:13,0:13:8.85:173,9,0	0/0:13,0:13:6.49:0,6,277	1/1:13,0:14:9.88:205,10,0	./.	0/0:14,0:13:3.93:0,4,11	./.	1/1:11,0:11:3.01:88,3,0	1/1:14,0:14:5.95:92,6,0	./.	1/1:13,0:13:2.98:89,3,0	1/1:8,0:9:7.84:126,8,0	0/0:18,0:17:23.44:0,23,558	0/0:8,0:6:0:0,0,0	0/0:10,0:9:9.13:0,9,177
chr10	99296890	.	C	CAA	9725.13	PASS	AB=0.764;AC=42;AF=0.750;AN=56;BaseQRankSum=-1.295;DP=649;FS=0.000;HRun=13;HaplotypeScore=104.3838;InbreedingCoeff=0.7871;MQ=75.42;MQ0=5;MQRankSum=0.106;QD=19.07;ReadPosRankSum=-1.765;VQSLOD=3.7179;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:65.42:0,65,561	1/1:0,4:7:15.04:184,15,0	0/0:25,0:17:7.82:0,8,51	0/0:25,0:22:0.90:0,1,93	1/1:7,23:35:82.23:941,82,0	0/1:3,5:11:3.39:186,0,3	1/1:8,9:20:29.02:318,29,0	0/0:16,0:17:32.58:0,33,317	1/1:4,16:21:35.60:453,36,0	1/1:16,17:36:33.76:715,34,0	1/1:7,13:25:50.01:548,50,0	1/1:6,12:19:29.58:371,30,0	1/1:10,9:22:21.06:267,21,0	1/1:6,17:25:31.92:408,32,0	1/1:5,22:29:35.09:417,35,0	0/1:18,1:19:4.84:5,0,276	1/1:2,11:15:24.04:295,24,0	1/1:4,1:13:33.07:351,33,0	1/1:14,10:27:11.13:342,11,0	1/1:12,12:28:52.50:564,52,0	1/1:4,6:14:26.94:292,27,0	1/1:4,16:24:52.29:526,52,0	1/1:2,16:24:53.65:669,54,0	1/1:4,29:37:74.67:953,75,0	1/1:5,16:27:37.96:380,38,0	0/0:20,0:23:16.02:0,16,323	1/1:12,11:29:51.59:540,52,0	0/0:14,0:16:35.82:0,36,353
chr10	99297440	.	C	CT	2542.95	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.802;DP=786;FS=0.000;HRun=3;HaplotypeScore=83.5579;InbreedingCoeff=0.9969;MQ=81.45;MQ0=0;MQRankSum=-0.640;QD=33.46;ReadPosRankSum=-2.758;VQSLOD=2.7313;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,129,1509	0/0:11,0:11:33.07:0,33,364	0/0:29,0:29:63.05:0,63,667	0/0:28,0:28:17.82:0,18,536	0/0:33,0:33:87.25:0,87,1033	0/0:30,0:30:87.24:0,87,1017	0/0:33,0:33:93.26:0,93,1092	1/1:8,29:37:96.17:1217,96,0	0/0:27,0:27:75.23:0,75,899	0/0:34,0:34:93.28:0,93,1115	0/0:18,0:18:51.14:0,51,600	0/0:26,0:26:72.21:0,72,852	0/0:30,0:30:81.23:0,81,949	0/0:18,0:18:54.17:0,54,647	0/0:34,0:34:96.24:0,96,1106	0/0:27,0:27:81.25:0,81,971	0/0:31,0:31:90.24:0,90,1054	0/0:17,0:17:48.11:0,48,560	0/0:21,0:21:60.16:0,60,705	0/0:23,0:23:54.16:0,54,648	0/0:45,0:45:99:0,132,1516	0/0:28,0:28:81.25:0,81,972	0/0:23,0:23:66.16:0,66,756	0/0:42,0:42:99:0,114,1342	0/0:24,0:24:72.20:0,72,844	1/1:1,16:17:51.09:639,51,0	0/0:30,0:30:81.25:0,81,969	1/1:2,20:22:63.18:830,63,0
chr10	99299002	.	CACAA	C	2032.68	PASS	AB=0.825;AC=8;AF=0.143;AN=56;BaseQRankSum=10.294;DP=684;FS=0.000;HRun=0;HaplotypeScore=105.9868;InbreedingCoeff=0.7563;MQ=67.38;MQ0=9;MQRankSum=-2.203;QD=18.65;ReadPosRankSum=1.496;VQSLOD=3.2726;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:69.20:0,69,1580	0/0:12,0:12:12.04:0,12,289	0/0:26,0:17:18.05:0,18,356	0/0:22,0:21:21.03:0,21,387	0/0:27,0:27:63.22:0,63,1496	0/0:19,0:19:39.13:0,39,930	0/0:22,0:22:48.16:0,48,1147	1/1:10,10:19:27.06:387,27,0	0/0:31,0:31:66.23:0,66,1586	0/0:24,0:24:42.14:0,42,1010	0/0:14,0:13:24.08:0,24,579	0/0:17,0:17:30.09:0,30,676	0/0:31,0:31:75.26:0,75,1795	0/1:21,1:22:0.16:0,0,962	0/0:29,0:29:63.22:0,63,1514	0/0:20,0:20:42.14:0,42,999	0/0:30,0:30:60.21:0,60,1436	1/1:6,15:21:42.14:676,42,0	0/0:34,0:34:51.17:0,51,1193	0/0:17,0:17:39.13:0,39,932	0/0:38,0:38:81.26:0,81,1895	0/0:13,0:13:30.10:0,30,723	0/0:18,0:18:30.10:0,30,718	0/0:36,0:36:81.26:0,81,1891	0/0:13,0:12:33.11:0,33,791	0/1:19,15:33:30.22:586,0,30	0/0:45,1:46:38.97:0,39,1917	1/1:0,12:12:33.11:531,33,0
chr10	99299625	.	GTT	G	9616.59	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-8.630;DP=523;FS=7.172;HRun=11;HaplotypeScore=76.8862;InbreedingCoeff=0.9959;MQ=71.42;MQ0=3;MQRankSum=0.231;QD=25.99;ReadPosRankSum=5.298;VQSLOD=4.7282;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.18:0,66,775	1/1:0,8:8:18.05:192,18,0	0/0:16,0:14:31.81:0,32,375	0/0:11,0:10:17.36:0,17,251	1/1:2,20:22:57.10:607,57,0	1/1:3,18:21:42.09:447,42,0	1/1:3,16:19:39.08:415,39,0	0/0:14,0:34:67.66:0,68,667	1/1:1,17:18:48.12:511,48,0	1/1:2,22:22:60.13:639,60,0	1/1:1,24:25:63.14:670,63,0	1/1:1,19:20:54.12:575,54,0	1/1:2,8:10:21.03:223,21,0	1/1:0,14:14:36.09:383,36,0	1/1:3,20:23:54.11:575,54,0	0/0:10,0:11:27.09:0,27,398	1/1:0,22:22:57.14:607,57,0	0/0:18,0:19:50.63:0,51,720	1/1:4,19:24:54.08:627,54,0	1/1:3,18:21:54.09:566,54,0	1/1:3,13:16:39.09:415,39,0	1/1:4,10:14:30.06:319,30,0	1/1:1,15:17:47.84:482,48,0	1/1:1,12:13:33.08:351,33,0	1/1:1,17:18:45.05:534,45,0	0/0:3,0:18:39.29:0,39,377	1/1:1,20:21:45.10:479,45,0	0/0:9,0:16:36:0,36,345
chr10	99299732	.	T	TC	683.36	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-5.509;DP=532;FS=3.578;HRun=8;HaplotypeScore=56.8197;InbreedingCoeff=0.9802;MQ=81.94;MQ0=0;MQRankSum=-2.428;QD=14.86;ReadPosRankSum=-0.772;VQSLOD=3.4242;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:78.03:0,78,713	0/0:9,0:9:21.01:0,21,192	0/0:16,0:16:11.27:0,11,177	0/0:21,0:20:26.67:0,27,248	0/0:20,0:20:53.99:0,54,484	0/0:25,0:25:60.03:0,60,549	0/0:24,0:24:65.99:0,66,593	1/1:13,11:23:24.50:247,25,0	0/0:12,0:12:24:0,24,218	0/0:26,0:26:63.02:0,63,576	0/0:14,0:14:42.01:0,42,380	0/0:19,0:19:54.01:0,54,489	0/0:16,0:16:41.99:0,42,375	0/0:19,0:19:54.03:0,54,494	0/0:22,0:22:63:0,63,567	0/0:19,0:19:51.01:0,51,461	0/0:24,0:24:66.03:0,66,604	0/0:12,0:12:30.01:0,30,275	0/0:13,0:13:34.19:0,34,294	0/0:18,0:18:44.75:0,45,393	0/0:17,0:17:47.86:0,48,425	0/0:15,0:15:36.01:0,36,327	0/0:16,0:16:42.01:0,42,379	0/0:38,0:38:99:0,99,906	0/0:14,0:14:30.91:0,31,298	1/1:4,6:10:24.07:276,24,0	0/0:24,1:25:28.38:0,28,507	1/1:1,11:12:19.20:301,19,0
chr10	99300676	.	TTTC	T	978.34	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.386;DP=359;FS=9.192;HRun=0;HaplotypeScore=60.5685;InbreedingCoeff=0.8457;MQ=84.98;MQ0=2;MQRankSum=-2.571;QD=33.74;ReadPosRankSum=2.590;VQSLOD=3.1520;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:69.23:1073,69,0	0/0:8,0:8:18.05:0,18,353	0/0:20,0:18:31.13:0,31,490	0/0:40,0:28:57.69:0,58,1145	0/0:12,0:12:36.12:0,36,786	0/0:7,0:7:18.02:0,18,347	0/0:13,0:13:36.12:0,36,766	0/0:23,0:23:63.22:0,63,1377	0/0:14,0:14:36.12:0,36,787	0/0:5,0:5:15.05:0,15,291	0/0:8,0:8:24.08:0,24,524	0/0:10,0:10:30.10:0,30,612	0/0:11,0:11:33.11:0,33,721	0/0:9,0:9:24.08:0,24,482	0/0:4,0:4:9.03:0,9,197	0/0:9,0:9:24.08:0,24,524	0/0:12,0:12:33.11:0,33,721	0/0:4,0:4:12.04:0,12,262	0/0:7,0:7:15.05:0,15,328	0/0:10,0:10:27.09:0,27,577	0/0:21,0:21:57.20:0,57,1246	0/0:11,0:11:33.11:0,33,712	0/0:4,0:4:12.04:0,12,261	0/0:15,0:15:42.14:0,42,869	0/0:10,0:10:30.10:0,30,656	0/0:13,0:13:39.13:0,39,830	0/0:16,0:15:39.13:0,39,852	0/0:12,0:12:21.07:0,21,458
chr10	99301797	.	G	GA	13692.11	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-9.117;DP=535;FS=1.173;HRun=8;HaplotypeScore=48.1426;InbreedingCoeff=0.9840;MQ=71.64;MQ0=0;MQRankSum=-0.564;QD=28.58;ReadPosRankSum=1.719;VQSLOD=5.2339;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:17:39.77:202,40,0	1/1:0,9:9:24.07:277,24,0	0/0:9,0:9:14.59:0,15,120	0/0:6,0:6:14.85:0,15,123	1/1:0,30:30:90.27:1039,90,0	1/1:5,10:15:30.09:346,30,0	1/1:2,12:14:30.09:346,30,0	1/1:9,26:35:78.22:889,78,0	1/1:3,18:21:51.15:589,51,0	1/1:5,24:29:72.21:831,72,0	1/1:4,25:29:75.22:866,75,0	1/1:3,19:22:51.15:589,51,0	1/1:1,6:7:15.04:173,15,0	1/1:1,13:14:36.11:416,36,0	1/1:2,21:23:57.17:658,57,0	0/0:13,0:13:39.02:0,39,357	1/1:0,11:11:30.09:346,30,0	0/0:28,0:27:78:0,78,703	1/1:2,12:14:36.10:407,36,0	1/1:1,28:29:81.15:905,81,0	1/1:0,8:8:24.07:277,24,0	1/1:1,9:10:27.08:311,27,0	1/1:2,25:27:78.19:880,78,0	1/1:1,15:16:45.13:519,45,0	1/1:1,16:17:42.12:485,42,0	1/1:3,21:24:63.17:716,63,0	1/1:3,35:36:87.26:1004,87,0	1/1:2,18:20:54.16:622,54,0
chr10	99302079	.	T	TAAC	641.74	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.874;DP=594;FS=2.516;HRun=0;HaplotypeScore=81.6042;InbreedingCoeff=0.9973;MQ=84.48;MQ0=0;MQRankSum=-2.851;QD=42.78;ReadPosRankSum=0.449;VQSLOD=5.0462;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:33.11:736,33,0	0/0:8,0:8:24.05:0,24,362	0/0:19,0:19:54.16:0,54,824	0/0:19,0:18:42.13:0,42,664	0/0:29,0:29:84.29:0,84,1372	0/0:31,0:31:90.29:0,90,1440	0/0:28,0:28:78.27:0,78,1264	0/0:31,0:31:87.28:0,87,1368	0/0:14,0:14:36.12:0,36,583	0/0:26,0:26:72.25:0,72,1168	0/0:18,0:18:45.15:0,45,724	0/0:19,0:19:48.16:0,48,780	0/0:19,0:19:54.14:0,54,846	0/0:20,0:20:60.20:0,60,971	0/0:19,0:19:57.19:0,57,922	0/0:16,0:16:48.16:0,48,781	0/0:16,0:16:48.16:0,48,784	0/0:25,0:25:75.26:0,75,1218	0/0:21,0:21:57.17:0,57,877	0/0:25,0:25:69.21:0,69,1079	0/0:25,0:25:75.23:0,75,1186	0/0:18,0:18:48.16:0,48,779	0/0:28,0:28:81.28:0,81,1318	0/0:12,0:12:33.11:0,33,539	0/0:19,0:19:57.19:0,57,927	0/0:25,0:25:72.25:0,72,1175	0/0:31,0:31:87.30:0,87,1412	0/0:18,0:18:54.18:0,54,882
chr10	99302509	.	AAGTCAAGAGGGT	A	583.45	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.786;DP=483;FS=15.152;HRun=0;HaplotypeScore=161.0699;InbreedingCoeff=0.9691;MQ=61.07;MQ0=0;MQRankSum=-4.107;QD=53.04;ReadPosRankSum=-0.834;VQSLOD=2.4406;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.30:0,87,4483	0/0:5,0:5:15.03:0,15,638	0/0:19,0:17:39.13:0,39,1895	0/0:19,0:19:51.20:0,51,2149	0/0:11,0:11:33.11:0,33,1695	0/0:12,0:12:36.12:0,36,1925	0/0:30,0:30:75.24:0,75,4001	0/0:13,0:13:36.10:0,36,1166	0/0:15,0:15:45.15:0,45,2494	0/0:19,0:19:54.19:0,54,2991	0/0:10,0:10:30.10:0,30,1667	0/0:16,0:16:36.12:0,36,1786	0/0:17,0:17:48.16:0,48,2778	0/0:11,0:11:33.11:0,33,1727	0/0:10,0:10:27.09:0,27,1532	0/0:15,0:15:45.15:0,45,2507	0/0:29,0:29:78.25:0,78,4315	0/0:8,0:8:21.07:0,21,1272	0/0:17,0:17:45.11:0,45,2013	0/0:23,0:23:66.23:0,66,3535	0/0:27,0:27:75.26:0,75,4596	0/0:20,0:20:57.20:0,57,3336	0/0:19,0:19:54.19:0,54,3023	0/0:23,0:23:66.23:0,66,3709	1/1:4,7:11:18.06:674,18,0	0/0:25,0:25:72.25:0,72,4031	0/0:16,0:16:48.16:0,48,2895	0/0:10,0:10:27.09:0,27,1329
chr10	99302546	.	G	GGAGA	1755.97	PASS	AB=1.000;AC=39;AF=0.929;AN=42;DP=443;FS=0.000;HRun=0;HaplotypeScore=93.0708;InbreedingCoeff=0.2529;MQ=54.91;MQ0=12;QD=5.32;VQSLOD=1.2691;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:14.45:130,14,0	1/1:7,0:6:0.47:1,0,0	./.	./.	0/1:15,0:15:0:0,0,0	1/1:18,0:17:5.94:89,6,0	1/1:34,0:33:29.88:274,30,0	./.	1/1:14,0:13:3.01:52,3,0	1/1:18,0:17:22.64:191,23,0	0/1:8,0:8:0:0,0,0	1/1:9,0:14:2.74:12,3,0	1/1:12,0:11:5.95:80,6,0	1/1:19,0:18:8.96:69,9,0	1/1:4,4:10:3.01:67,3,0	1/1:15,0:15:2.92:70,3,0	1/1:21,0:21:14.89:148,15,0	1/1:6,0:5:8.93:64,9,0	1/1:13,0:11:3:25,3,0	1/1:9,0:9:3:25,3,0	1/1:26,0:26:5.94:44,6,0	./.	0/1:9,0:9:0:0,0,0	1/1:21,0:20:18.03:309,18,0	./.	./.	1/1:15,0:14:12.47:179,12,0	./.
chr10	99302859	.	C	CAAGTGTGGT	3590.79	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.352;DP=665;FS=13.270;HRun=0;HaplotypeScore=187.8107;InbreedingCoeff=0.9754;MQ=66.22;MQ0=0;MQRankSum=-8.575;QD=78.06;ReadPosRankSum=-2.770;VQSLOD=2.1215;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,24:45:99:3591,99,0	0/0:7,0:7:15.01:0,15,326	0/0:24,0:23:54.19:0,54,1446	0/0:24,0:24:54.18:0,54,1352	0/0:12,0:12:27.09:0,27,749	0/0:23,0:22:51.18:0,51,1495	0/0:30,0:30:60.18:0,60,1571	0/0:28,0:28:54.18:0,54,1487	0/0:23,0:23:54.13:0,54,1451	0/0:28,0:28:81.26:0,81,2298	0/0:8,0:8:18.06:0,18,528	0/0:27,0:27:66.14:0,66,1723	0/0:20,0:20:48.14:0,48,1342	0/0:28,0:28:72.12:0,72,2068	0/0:20,0:20:51.15:0,51,1330	0/0:14,0:14:39.13:0,39,1095	0/0:38,0:38:99:0,105,2949	0/0:28,0:28:78.25:0,78,2082	0/0:19,0:18:42.14:0,42,1124	0/0:18,0:18:45.14:0,45,1217	0/0:42,0:42:99:0,123,3563	0/0:26,0:26:69.24:0,69,2021	0/0:19,0:19:51.18:0,51,1475	0/0:30,0:30:81.23:0,81,2229	0/0:25,0:25:69.22:0,69,1880	0/0:30,0:30:75.26:0,75,2149	0/0:15,0:14:36.12:0,36,1007	0/0:13,0:13:39.12:0,39,1068
chr10	99302989	.	AGT	A	198.02	PASS	AB=0.853;AC=3;AF=0.056;AN=54;BaseQRankSum=-2.151;DP=705;FS=2.528;HRun=0;HaplotypeScore=157.5385;InbreedingCoeff=0.0876;MQ=58.55;MQ0=14;MQRankSum=2.028;QD=2.64;ReadPosRankSum=-0.318;VQSLOD=2.8637;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,8:25:13.02:246,0,13	0/0:12,0:12:7.92:0,8,46	0/1:31,0:22:0:0,0,0	./.	0/0:27,0:23:7.71:0,8,30	0/0:20,0:19:8.96:0,9,81	0/0:31,0:30:19.07:0,19,142	0/0:23,0:22:21.39:0,21,166	0/0:28,0:27:11.04:0,11,69	0/0:34,0:29:48.74:0,49,366	0/0:20,0:20:5.41:0,5,41	0/0:34,0:32:14.95:0,15,103	0/0:27,0:25:23.17:0,23,131	0/0:30,0:27:10.23:0,10,54	0/0:32,0:31:17.72:0,18,145	0/1:14,3:18:39.68:40,0,261	0/0:32,0:31:20.71:0,21,149	0/0:16,0:16:17.89:0,18,143	0/0:24,0:22:12.31:0,12,80	0/0:23,0:21:2.71:0,3,11	0/0:45,0:44:13.45:0,13,103	0/0:27,0:24:17.03:0,17,96	0/0:21,0:21:6.74:0,7,60	0/0:26,0:26:9.57:0,10,84	0/0:16,0:16:11.18:0,11,64	0/0:20,0:25:23.68:0,24,276	0/0:16,0:15:19.84:0,20,108	0/0:11,0:11:6.44:0,6,45
chr10	99303021	.	T	TGTG	2182.16	PASS	AB=0.699;AC=22;AF=0.393;AN=56;BaseQRankSum=-0.086;DP=778;FS=17.612;HRun=0;HaplotypeScore=152.5667;InbreedingCoeff=-0.3911;MQ=41.56;MQ0=78;MQRankSum=-0.618;QD=4.02;ReadPosRankSum=3.835;VQSLOD=1.6804;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:28:17.49:17,0,463	0/1:5,0:14:26.57:121,0,27	0/0:50,0:15:35.89:0,36,421	0/0:54,0:10:14.48:0,14,223	0/0:12,0:18:7.78:0,8,30	1/1:7,0:19:17.67:198,18,0	0/1:14,0:21:44.53:45,0,119	0/0:25,0:23:60.45:0,60,630	0/1:13,0:25:31.05:120,0,31	0/1:22,0:29:99:387,0,235	1/1:11,0:18:5.09:131,5,0	0/1:19,0:30:46.55:47,0,88	0/1:10,0:18:71.49:155,0,71	0/1:19,0:25:12.33:77,0,12	0/1:14,0:21:57.07:57,0,77	0/0:29,0:29:61.51:0,62,844	0/1:14,0:24:80.65:137,0,81	0/1:12,0:18:22.66:23,0,130	0/1:17,0:21:22.59:301,0,23	0/0:4,0:17:2.73:0,3,12	0/1:21,0:47:33.70:114,0,34	0/1:19,0:28:53.35:70,0,53	0/1:16,0:24:31.92:59,0,32	0/1:16,0:25:49.99:93,0,50	0/1:11,10:21:30.32:48,0,30	0/0:25,0:24:21.40:0,21,513	0/1:8,0:16:20.98:149,0,21	0/0:6,0:6:14.99:0,15,151
chr10	99303153	.	TTG	T	548.43	PASS	AB=0.921;AC=17;AF=0.327;AN=52;BaseQRankSum=3.752;DP=879;FS=3.577;HRun=0;HaplotypeScore=133.6231;InbreedingCoeff=-0.4805;MQ=56.48;MQ0=15;MQRankSum=0.143;QD=1.05;ReadPosRankSum=1.308;VQSLOD=2.0778;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:51:32.97:0,33,290	0/1:6,2:8:24.69:25,0,49	./.	./.	0/1:24,2:26:33.92:34,0,347	0/0:17,0:17:14.99:0,15,180	0/1:39,0:39:18.11:18,0,604	0/0:30,0:29:13.54:0,14,156	0/1:24,2:26:33.91:34,0,364	0/1:41,0:41:1.70:2,0,412	0/1:18,1:19:21.47:21,0,119	0/1:33,2:35:58.07:58,0,427	0/0:28,1:28:2.61:0,3,447	0/1:31,3:33:29.29:29,0,409	0/1:31,0:30:38.10:38,0,276	0/0:28,0:28:46.71:0,47,680	0/1:31,4:36:65.06:65,0,652	0/1:18,12:31:15.06:188,0,15	0/0:22,0:18:24.08:0,24,348	0/1:21,1:22:18.47:18,0,146	0/1:76,4:76:58.60:59,0,826	0/0:38,0:38:53.60:0,54,826	0/0:25,0:25:7.37:0,7,317	0/0:52,2:54:12.34:0,12,1131	0/1:26,1:27:13.74:14,0,487	0/1:28,3:31:67.07:67,0,264	0/1:16,2:18:6.85:7,0,292	0/1:15,1:16:18.71:19,0,123
chr10	99303918	.	TA	T	982.80	PASS	AB=0.829;AC=10;AF=0.179;AN=56;BaseQRankSum=7.359;DP=492;FS=4.418;HRun=12;HaplotypeScore=53.9231;InbreedingCoeff=0.4400;MQ=78.78;MQ0=3;MQRankSum=1.207;QD=7.74;ReadPosRankSum=-1.782;VQSLOD=1.7235;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:21:5.59:247,6,0	0/1:6,1:7:2:2,0,155	0/0:34,1:17:15.20:0,15,208	0/0:21,0:15:5.17:0,5,38	0/0:16,0:18:15.65:0,16,330	0/0:19,0:19:54.10:0,54,541	0/0:14,0:16:41.12:0,41,408	1/1:11,16:29:48.84:356,49,0	0/0:11,0:11:27.04:0,27,268	0/0:17,0:20:50.58:0,51,458	0/0:16,0:16:41.63:0,42,390	0/1:14,0:15:15.12:15,0,214	0/0:12,1:13:9.80:0,10,271	0/0:11,1:12:6.76:0,7,232	0/1:16,3:19:21.62:22,0,348	0/0:12,0:12:29.99:0,30,287	0/0:32,0:34:5.06:0,5,662	0/0:30,2:32:51.73:0,52,684	0/0:12,0:13:32.90:0,33,319	0/0:17,1:18:21.85:0,22,403	0/0:11,0:11:30.03:0,30,287	0/0:8,0:8:18.02:0,18,176	0/0:10,0:11:26.87:0,27,251	0/0:4,0:4:8.99:0,9,83	0/0:15,0:16:38.91:0,39,376	0/1:6,16:22:17.17:277,0,17	0/0:21,3:24:30.75:0,31,460	1/1:4,9:14:28.91:215,29,0
chr10	99304733	.	TCCCCTCCTCTTCC	T	4735.20	PASS	AB=0.521;AC=5;AF=0.089;AN=56;BaseQRankSum=10.968;DP=620;FS=7.175;HRun=0;HaplotypeScore=234.6443;InbreedingCoeff=0.7729;MQ=72.74;MQ0=2;MQRankSum=-6.652;QD=86.09;ReadPosRankSum=-0.243;VQSLOD=3.7259;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,5448	0/0:5,0:5:15.05:0,15,1001	0/0:29,0:22:39.95:0,40,2095	0/0:32,0:28:68.49:0,68,3176	0/0:25,0:25:75.26:0,75,4469	0/0:19,0:19:54.17:0,54,3194	0/0:21,0:21:60.21:0,60,3513	1/1:1,22:23:63.18:1482,63,0	0/0:28,0:28:81.27:0,81,4526	0/0:24,0:24:69.24:0,69,4207	0/0:27,0:27:78.24:0,78,4226	0/0:25,0:25:75.23:0,75,4430	0/0:15,0:15:39.13:0,39,2500	0/0:19,0:19:57.20:0,57,3170	0/0:35,0:35:99:0,105,6683	0/0:14,0:14:42.14:0,42,2498	0/0:18,0:18:51.16:0,51,2895	0/0:15,0:15:45.15:0,45,2712	0/0:18,0:18:51.17:0,51,2910	0/0:22,0:22:66.23:0,66,3953	0/0:33,0:33:96.08:0,96,5621	0/0:21,0:21:63.21:0,63,3525	0/0:16,0:16:46.39:0,46,2302	0/0:33,0:33:96.32:0,96,5987	0/0:15,0:15:45.14:0,45,2569	0/1:2,23:25:99:2395,0,326	0/0:19,0:19:57.20:0,57,3054	1/1:0,7:7:21.07:859,21,0
chr10	99305512	.	GTC	G	20126.78	PASS	AB=0.977;AC=51;AF=0.911;AN=56;BaseQRankSum=5.114;DP=688;FS=2.518;HRun=0;HaplotypeScore=122.8618;InbreedingCoeff=0.7875;MQ=72.10;MQ0=11;MQRankSum=-4.844;QD=31.65;ReadPosRankSum=5.606;VQSLOD=6.6857;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:87.29:1195,87,0	1/1:0,7:7:21.03:267,21,0	0/0:31,0:21:50.91:0,51,710	0/1:42,0:31:14.59:15,0,593	1/1:1,29:30:75.04:924,75,0	1/1:0,28:28:78.26:1071,78,0	1/1:2,28:30:66.22:906,66,0	1/1:2,27:29:78.21:1008,78,0	1/1:2,18:20:51.17:701,51,0	1/1:1,19:20:57.17:752,57,0	1/1:2,18:20:51.17:699,51,0	1/1:1,26:26:63.21:865,63,0	1/1:0,18:18:54.18:737,54,0	1/1:0,16:16:48.16:659,48,0	1/1:1,26:28:68.96:919,69,0	1/1:1,19:18:48.16:659,48,0	1/1:0,28:26:60.20:824,60,0	0/0:20,0:20:54.12:0,54,887	1/1:2,27:28:78.21:1023,78,0	1/1:1,18:19:51.13:679,51,0	1/1:3,26:29:72.24:989,72,0	1/1:2,16:17:36.12:495,36,0	1/1:2,20:22:51.17:699,51,0	1/1:1,31:30:78.26:1071,78,0	1/1:2,20:22:47.89:629,48,0	1/1:2,20:22:33.25:722,33,0	1/1:1,22:22:54.18:741,54,0	1/1:2,21:23:67.65:879,68,0
chr10	99306165	.	TG	T	5441.17	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-2.550;DP=521;FS=7.098;HRun=2;HaplotypeScore=122.5130;InbreedingCoeff=0.8470;MQ=74.25;MQ0=1;MQRankSum=-1.069;QD=12.06;ReadPosRankSum=-0.930;VQSLOD=2.8635;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:12:3.48:31,3,0	1/1:6,0:6:14.69:102,15,0	0/0:24,2:25:25.26:0,25,619	0/0:18,1:18:14.45:0,14,447	1/1:21,5:26:37.85:416,38,0	1/1:13,4:17:21.04:237,21,0	1/1:12,1:13:16.29:192,16,0	1/1:30,0:27:40.60:322,41,0	1/1:14,1:15:16.05:145,16,0	1/1:19,1:20:42.03:352,42,0	1/1:14,3:17:24.62:212,25,0	1/1:14,2:16:25.71:213,26,0	1/1:2,9:11:5.44:71,5,0	1/1:14,1:15:32.56:249,33,0	1/1:20,2:21:17.60:136,18,0	1/1:16,0:16:17.20:104,17,0	1/1:16,3:18:12.45:168,12,0	0/0:25,0:25:63.15:0,63,888	1/1:19,3:22:37.74:342,38,0	1/1:18,3:22:31.72:262,32,0	1/1:10,1:11:14.22:139,14,0	1/1:18,3:21:32.30:277,32,0	1/1:16,2:18:23.01:180,23,0	1/1:16,5:22:37.34:341,37,0	1/1:13,0:13:27.36:236,27,0	1/1:26,1:27:37.89:270,38,0	1/1:20,4:23:40.51:374,41,0	1/1:12,1:13:8.66:69,9,0
chr10	99306170	.	TG	T	7796.24	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=0.289;DP=596;FS=5.924;HRun=1;HaplotypeScore=119.1108;InbreedingCoeff=0.9938;MQ=67.62;MQ0=1;MQRankSum=-2.978;QD=14.79;ReadPosRankSum=-2.099;VQSLOD=3.7457;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:19:23.90:108,24,0	1/1:7,0:7:20.73:158,21,0	0/0:27,0:26:28.45:0,28,395	0/0:14,1:14:34.35:0,34,297	1/1:30,0:30:61.19:470,61,0	1/1:23,1:24:53.19:389,53,0	1/1:14,0:14:27.96:212,28,0	1/1:39,0:36:66.08:446,66,0	1/1:16,0:16:40.75:256,41,0	1/1:25,0:25:66.07:473,66,0	1/1:21,0:21:43.98:302,44,0	1/1:22,0:22:54.59:396,55,0	1/1:14,0:14:19.17:151,19,0	1/1:16,0:16:44.51:317,45,0	1/1:21,1:21:51.94:317,52,0	1/1:17,0:17:24.47:132,24,0	1/1:21,0:20:38.60:252,39,0	0/0:26,0:26:63.27:0,63,649	1/1:22,1:23:55.82:430,56,0	1/1:23,1:24:57.84:416,58,0	1/1:13,1:14:32.40:215,32,0	1/1:19,1:19:47.70:347,48,0	1/1:17,0:17:33.40:228,33,0	1/1:22,0:22:48.41:410,48,0	1/1:13,0:13:35.20:276,35,0	1/1:31,0:31:59.47:360,59,0	1/1:30,0:29:72.96:543,73,0	1/1:23,0:23:34.70:192,35,0
chr10	99306483	.	A	AC	24212.08	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=10.220;DP=681;FS=2.028;HRun=0;HaplotypeScore=134.1404;InbreedingCoeff=0.9971;MQ=90.25;MQ0=0;MQRankSum=-10.452;QD=40.56;ReadPosRankSum=5.609;VQSLOD=4.0940;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,47:49:99:1849,123,0	1/1:0,7:7:21.07:323,21,0	0/0:24,0:24:69.14:0,69,859	0/0:31,0:31:72.43:0,72,1044	1/1:0,18:19:48.16:726,48,0	1/1:0,15:15:45.15:690,45,0	1/1:0,30:30:87.29:1316,87,0	1/1:1,21:22:63.18:904,63,0	1/1:0,21:21:54.18:816,54,0	1/1:0,23:23:66.14:882,66,0	1/1:0,9:9:21.07:319,21,0	1/1:0,20:20:51.17:771,51,0	1/1:0,30:30:84.28:1249,84,0	1/1:0,22:22:60.20:918,60,0	1/1:0,27:27:72.09:1083,72,0	1/1:1,22:23:63.21:945,63,0	1/1:1,26:27:72.24:1086,72,0	0/0:29,0:29:84.28:0,84,1167	1/1:1,14:15:45.14:662,45,0	1/1:1,19:20:54.10:771,54,0	1/1:1,47:48:99:2075,138,0	1/1:1,25:25:66.22:987,66,0	1/1:0,22:22:51.17:772,51,0	1/1:0,30:30:84.28:1268,84,0	1/1:0,18:18:54.18:820,54,0	1/1:0,26:26:78.25:1164,78,0	1/1:0,26:26:66.22:990,66,0	1/1:0,22:22:54.18:825,54,0
chr10	99306911	.	G	GCATGTGTGTA	66097.65	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-8.139;DP=850;FS=3.050;HRun=0;HaplotypeScore=218.8827;InbreedingCoeff=0.9616;MQ=56.18;MQ0=0;MQRankSum=-11.503;QD=84.96;ReadPosRankSum=4.850;VQSLOD=4.7681;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,29:46:54.18:2873,54,0	1/1:1,12:15:21.07:1127,21,0	0/0:25,0:23:66.12:0,66,1533	0/0:17,0:18:36.84:0,37,770	1/1:3,22:27:30.10:1599,30,0	1/1:3,17:23:51.18:2688,51,0	1/1:8,23:35:45.15:2411,45,0	1/1:17,18:49:99:4434,132,0	1/1:4,14:22:33.11:1741,33,0	1/1:4,30:38:99:4770,105,0	1/1:4,18:23:51.18:2723,51,0	1/1:5,24:32:56.91:3012,57,0	1/1:6,21:31:69.24:3657,69,0	1/1:7,20:33:66.23:3446,66,0	1/1:12,22:40:60.21:3073,60,0	1/1:6,26:37:51.17:2689,51,0	1/1:10,18:39:45.15:2258,45,0	0/0:29,0:29:84.18:0,84,2222	1/1:13,17:35:93.25:3143,93,0	1/1:10,21:34:60.21:3212,60,0	1/1:3,21:34:33.11:1751,33,0	1/1:7,20:29:36.12:1930,36,0	1/1:3,24:32:60.21:3147,60,0	1/1:7,21:33:27.40:1425,27,0	1/1:6,14:22:45.15:2354,45,0	1/1:6,24:32:78.17:3198,78,0	1/1:9,17:32:63.22:3116,63,0	1/1:1,2:3:6.02:322,6,0
chr10	99307329	.	C	CT	26764.17	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-0.316;DP=707;FS=3.553;HRun=1;HaplotypeScore=97.1973;InbreedingCoeff=0.9781;MQ=87.97;MQ0=0;MQRankSum=-9.900;QD=42.15;ReadPosRankSum=4.537;VQSLOD=4.6884;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:81.28:1295,81,0	1/1:0,9:9:21.01:336,21,0	0/0:22,0:22:66.22:0,66,904	0/0:32,0:32:84.23:0,84,1109	1/1:0,22:22:66.22:1041,66,0	1/1:2,22:24:60.20:943,60,0	1/1:1,21:22:57.19:911,57,0	1/1:1,36:37:99:1675,108,0	1/1:1,30:31:78.27:1246,78,0	1/1:0,26:26:78.27:1241,78,0	1/1:1,19:20:54.18:850,54,0	1/1:0,27:27:69.24:1103,69,0	1/1:3,16:19:39.13:614,39,0	1/1:0,37:37:99:1630,102,0	1/1:2,31:33:78.27:1247,78,0	1/1:0,24:24:57.19:911,57,0	1/1:0,32:32:90.31:1438,90,0	0/0:18,0:18:54.18:0,54,755	1/1:0,26:26:78.27:1246,78,0	1/1:0,15:15:39.13:623,39,0	1/1:0,34:34:87.30:1390,87,0	1/1:0,23:23:63.21:1007,63,0	1/1:0,26:26:63.21:995,63,0	1/1:0,23:23:57.19:911,57,0	1/1:0,25:25:69.24:1103,69,0	1/1:0,30:30:87.30:1385,87,0	1/1:0,32:32:93.32:1480,93,0	1/1:2,3:5:9.03:144,9,0
chr10	99307442	.	G	GGAGAGAGA	5683.91	PASS	AB=0.891;AC=48;AF=0.889;AN=54;BaseQRankSum=-0.104;DP=680;FS=3.782;HRun=0;HaplotypeScore=207.2478;InbreedingCoeff=0.0988;MQ=66.95;MQ0=13;MQRankSum=-1.716;QD=9.59;ReadPosRankSum=-1.484;VQSLOD=3.7437;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:37:4:0,4,68	1/1:5,1:6:6.02:146,6,0	0/1:40,0:23:0:0,0,0	./.	1/1:21,0:21:2.54:24,3,0	1/1:20,0:20:6.02:203,6,0	1/1:9,7:21:9.03:315,9,0	0/1:30,0:30:73.20:84,0,73	1/1:25,0:25:12.03:329,12,0	1/1:21,0:20:36.04:675,36,0	1/1:13,0:13:6.01:93,6,0	1/1:11,8:25:2.87:122,3,0	1/1:10,6:20:12.04:436,12,0	1/1:9,13:28:9.50:368,10,0	1/1:26,0:26:8.98:160,9,0	0/1:9,0:23:39.60:129,0,40	1/1:18,0:18:17.96:352,18,0	1/1:11,0:31:9.49:173,9,0	1/1:23,0:20:20.68:358,21,0	1/1:24,0:25:15:142,15,0	1/1:17,0:17:2.58:25,3,0	1/1:32,0:32:11.58:180,12,0	1/1:17,0:17:11.23:90,11,0	1/1:14,7:31:8.63:342,9,0	1/1:17,0:17:2.77:51,3,0	0/1:27,0:27:34.18:309,0,34	1/1:22,0:19:17.73:465,18,0	1/1:11,0:11:11.93:114,12,0
chr10	99308323	.	GT	G	1509.37	PASS	AB=0.924;AC=14;AF=0.250;AN=56;BaseQRankSum=-1.573;DP=449;FS=6.661;HRun=11;HaplotypeScore=106.5538;InbreedingCoeff=0.4384;MQ=62.67;MQ0=1;MQRankSum=3.349;QD=9.87;ReadPosRankSum=-1.316;VQSLOD=2.4816;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:59.93:492,60,0	0/0:6,0:6:11.24:0,11,82	0/1:11,3:14:62.89:63,0,127	0/0:9,0:8:12.02:0,12,122	0/0:14,0:14:27.46:0,27,163	0/1:7,0:7:2.67:3,0,51	0/0:17,0:17:36.95:0,37,200	1/1:3,16:19:47.94:393,48,0	0/0:12,0:12:29.11:0,29,184	0/1:19,1:20:16.41:16,0,149	0/0:18,0:18:23.55:0,24,249	0/0:14,1:15:37.39:0,37,211	0/0:13,0:13:34.73:0,35,196	0/0:18,0:18:8.97:0,9,180	0/0:15,0:15:25.71:0,26,137	0/1:15,1:16:21.51:22,0,150	0/0:30,0:30:36.31:0,36,384	0/0:21,1:22:36.39:0,36,585	0/1:19,1:19:58.88:59,0,85	0/0:18,0:18:46.24:0,46,277	0/1:6,1:7:10.06:10,0,56	0/0:19,0:19:43.33:0,43,248	0/0:12,0:12:24.40:0,24,138	0/0:10,0:10:23.21:0,23,141	0/0:22,0:22:11.99:0,12,187	1/1:2,16:19:53.68:428,54,0	0/0:26,0:26:52.84:0,53,392	1/1:3,8:11:25.22:200,25,0
chr10	99308374	.	A	ATGTGTGTGTGTGTG	9838.72	PASS	AB=0.780;AC=41;AF=0.759;AN=54;BaseQRankSum=-1.426;DP=581;FS=1.600;HRun=0;HaplotypeScore=260.5540;InbreedingCoeff=0.2603;MQ=49.37;MQ0=15;MQRankSum=-3.368;QD=21.48;ReadPosRankSum=-2.976;VQSLOD=3.5265;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:6.02:130,6,0	1/1:9,1:10:6.02:404,6,0	0/0:37,0:12:8.94:0,9,171	0/0:23,0:9:8.92:0,9,199	1/1:9,4:15:0.47:1,0,0	1/1:14,4:19:9.03:564,9,0	1/1:25,4:29:3.01:71,3,0	0/1:24,0:28:38.65:169,0,39	1/1:13,2:15:9.03:544,9,0	1/1:14,6:21:30.06:1643,30,0	0/0:16,2:19:0.30:0,0,1	1/1:13,4:19:6.02:403,6,0	1/1:14,4:18:27.09:1410,27,0	1/1:14,1:22:6.02:294,6,0	1/1:13,8:22:5.95:404,6,0	1/1:9,5:16:12.04:750,12,0	0/1:22,3:27:41.47:1462,0,41	0/0:23,0:23:51.18:0,51,1914	1/1:18,1:17:15.05:515,15,0	1/1:20,1:20:2.75:25,3,0	1/1:13,0:14:3.24:23,3,0	0/1:21,8:27:0.02:0,0,0	./.	1/1:17,1:18:2.60:93,3,0	1/1:16,8:24:2.68:202,3,0	0/1:10,0:18:36.42:67,0,36	1/1:18,3:22:15.05:598,15,0	0/1:7,0:12:31.77:67,0,32
chr10	99308397	.	TAC	T	97.67	PASS	AB=0.970;AC=11;AF=0.196;AN=56;BaseQRankSum=1.559;DP=487;FS=5.005;HRun=0;HaplotypeScore=143.2547;InbreedingCoeff=0.1380;MQ=48.06;MQ0=11;MQRankSum=-1.132;QD=0.66;ReadPosRankSum=-3.249;VQSLOD=1.6610;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,1:24:11.83:25,0,12	0/0:7,0:7:3.84:0,4,21	0/0:35,0:13:29.37:0,29,478	0/0:31,0:16:26.52:0,27,592	0/1:15,0:15:0.11:0,0,0	0/0:17,0:18:4.85:0,5,34	0/0:21,0:21:5.82:0,6,67	0/0:19,0:19:0.13:0,0,199	0/0:9,1:10:8.14:0,8,48	0/0:19,0:19:24.77:0,25,228	1/1:9,1:10:2.31:7,2,0	0/0:10,1:12:10.53:0,11,63	0/1:17,3:20:57.46:57,0,69	0/0:16,1:17:11.33:0,11,63	0/0:18,0:18:5.42:0,5,39	0/0:11,0:11:0.22:0,0,49	0/1:22,1:23:89.30:89,0,132	0/0:22,0:22:66.22:0,66,1178	0/1:10,0:8:1.16:1,0,2	0/0:14,1:14:0.91:0,1,2	0/0:14,0:14:6:0,6,57	0/1:19,0:18:0:0,0,0	1/1:15,0:14:2.56:10,3,0	0/0:18,0:18:3.01:0,3,20	0/0:16,0:15:8.71:0,9,66	0/0:21,0:21:34.63:0,35,241	0/0:14,0:14:12.68:0,13,106	0/1:13,0:13:22.46:22,0,81
chr10	99309007	.	CG	C	1694.02	PASS	AB=0.600;AC=7;AF=0.125;AN=56;BaseQRankSum=9.171;DP=585;FS=0.000;HRun=5;HaplotypeScore=62.3805;InbreedingCoeff=0.8285;MQ=85.68;MQ0=0;MQRankSum=-2.088;QD=23.53;ReadPosRankSum=0.141;VQSLOD=2.3825;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:75.21:850,75,0	0/0:11,0:11:30.09:0,30,394	0/0:17,0:17:35.98:0,36,418	0/0:20,0:20:46.62:0,47,591	0/0:23,0:23:62.91:0,63,813	0/0:13,0:13:39.11:0,39,514	0/0:22,0:22:60.14:0,60,754	1/1:3,20:23:57.12:618,57,0	0/0:20,0:20:51.17:0,51,696	0/0:20,0:20:54.17:0,54,724	0/0:5,0:5:15.05:0,15,204	0/0:24,0:24:72.22:0,72,951	0/0:15,0:15:42.14:0,42,571	0/0:16,0:16:45.15:0,45,612	0/0:28,0:28:78.24:0,78,1036	0/0:15,0:15:42.14:0,42,572	0/0:40,0:40:99:0,114,1514	0/0:36,0:36:99:0,102,1391	0/0:16,0:16:42.14:0,42,573	0/0:12,0:12:33.08:0,33,414	0/0:44,0:44:99:0,120,1522	0/0:19,0:19:51.16:0,51,677	0/0:12,0:12:36.11:0,36,470	0/0:46,0:46:99:0,135,1766	0/0:16,0:16:45.10:0,45,551	0/1:4,8:12:13.87:236,0,14	0/0:23,0:23:69.20:0,69,906	1/1:0,4:4:12.03:136,12,0
chr10	99309255	.	G	GT	845.32	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.023;DP=562;FS=4.328;HRun=0;HaplotypeScore=103.5778;InbreedingCoeff=0.8426;MQ=80.52;MQ0=0;MQRankSum=-5.802;QD=24.86;ReadPosRankSum=-2.338;VQSLOD=3.8075;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,26:34:70.24:940,70,0	0/0:5,0:5:15.05:0,15,209	0/0:29,0:29:3.68:0,4,727	0/0:20,0:20:52.65:0,53,545	0/0:12,0:12:36.12:0,36,497	0/0:10,0:10:30.10:0,30,413	0/0:21,0:21:63.21:0,63,879	0/0:19,0:19:24.51:0,25,215	0/0:14,0:14:42.14:0,42,581	0/0:19,0:19:54.17:0,54,735	0/0:13,0:13:39.13:0,39,544	0/0:32,0:32:93.27:0,93,1258	0/0:23,0:23:68.97:0,69,873	0/0:23,0:23:69.22:0,69,947	0/0:16,0:16:48.13:0,48,633	0/0:29,0:28:87.29:0,87,1212	0/0:27,0:27:81.25:0,81,1109	0/0:12,0:12:36.09:0,36,483	0/0:14,0:14:42.14:0,42,575	0/0:12,0:12:24.08:0,24,335	0/0:23,0:23:69.16:0,69,903	0/0:27,0:27:71.51:0,72,910	0/0:16,0:16:38.75:0,39,544	0/0:32,0:32:96.32:0,96,1329	0/0:16,0:16:45.15:0,45,625	0/0:24,0:24:60.07:0,60,409	0/0:28,0:27:81.25:0,81,1110	0/0:10,0:10:18.01:0,18,105
chr10	99309268	.	GGT	G	1711.88	PASS	AB=0.756;AC=8;AF=0.143;AN=56;BaseQRankSum=4.289;DP=600;FS=6.113;HRun=0;HaplotypeScore=121.8564;InbreedingCoeff=0.6469;MQ=75.13;MQ0=0;MQRankSum=-3.315;QD=18.02;ReadPosRankSum=-0.843;VQSLOD=3.5029;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,27:34:66.21:825,66,0	0/0:8,0:8:24.08:0,24,395	0/0:34,0:33:31.32:0,31,847	0/0:23,0:23:46.04:0,46,757	0/0:17,0:17:39.13:0,39,640	0/0:9,0:9:24.08:0,24,391	0/0:26,0:26:63.22:0,63,1039	1/1:8,11:19:31.87:398,32,0	0/0:19,0:19:48.16:0,48,792	0/0:20,0:20:51.17:0,51,840	0/0:17,0:17:45.15:0,45,722	0/0:31,0:31:90.26:0,90,1442	0/0:21,0:21:54.17:0,54,854	0/0:22,1:23:22.67:0,23,902	0/0:17,0:17:42.14:0,42,674	0/0:26,0:25:75.26:0,75,1234	0/0:29,0:29:72.25:0,72,1188	0/1:13,1:14:17:17,0,383	0/0:14,0:14:21.07:0,21,331	0/0:15,0:15:39.12:0,39,613	0/0:33,0:33:96.33:0,96,1583	0/0:24,0:24:63.20:0,63,1013	0/0:17,0:17:39.13:0,39,636	0/0:37,1:38:73.85:0,74,1737	0/0:13,0:13:33.11:0,33,545	0/1:6,16:22:41.94:580,0,42	0/0:29,0:28:69.24:0,69,1134	1/1:3,3:6:3.01:38,3,0
chr10	99310770	.	T	TTCTC	3790.23	PASS	AB=0.655;AC=47;AF=0.904;AN=52;BaseQRankSum=-1.429;DP=584;FS=0.000;HRun=0;HaplotypeScore=149.7827;InbreedingCoeff=0.2764;MQ=60.20;MQ0=6;MQRankSum=0.495;QD=7.51;ReadPosRankSum=-1.676;VQSLOD=2.1749;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:15:1.55:0,2,4	1/1:6,0:6:9.03:138,9,0	./.	./.	1/1:34,0:34:11.88:135,12,0	1/1:36,0:36:12.04:188,12,0	1/1:28,0:26:9.03:148,9,0	1/1:35,0:35:16.36:201,16,0	1/1:14,0:14:9.02:104,9,0	1/1:27,0:26:27.39:345,27,0	1/1:18,0:18:6.02:81,6,0	1/1:12,0:12:6.02:117,6,0	1/1:10,0:9:10.51:105,11,0	1/1:26,0:26:11.97:137,12,0	1/1:16,0:16:2.96:19,3,0	0/0:15,0:15:2.89:0,3,28	1/1:11,0:18:12:157,12,0	0/1:9,9:19:1.34:133,0,1	1/1:22,0:22:20.51:270,21,0	1/1:31,0:31:8.95:116,9,0	1/1:9,0:9:3.01:49,3,0	1/1:31,0:31:5.98:84,6,0	1/1:20,0:20:2.94:44,3,0	1/1:6,0:6:6.02:112,6,0	1/1:17,0:17:9.02:119,9,0	1/1:27,0:26:31.39:408,31,0	1/1:25,0:24:38.47:441,38,0	1/1:18,0:16:15.35:137,15,0
chr10	99311972	.	T	TA	26042.83	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-11.211;DP=693;FS=0.000;HRun=0;HaplotypeScore=62.2244;InbreedingCoeff=0.9996;MQ=80.84;MQ0=0;MQRankSum=-9.261;QD=41.80;ReadPosRankSum=4.965;VQSLOD=5.1878;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,58:59:99:2345,151,0	1/1:1,12:13:36.12:563,36,0	0/0:26,0:26:72.22:0,72,957	0/0:23,0:23:66.11:0,66,872	1/1:0,26:27:78.20:1180,78,0	1/1:0,27:27:69.23:1079,69,0	1/1:0,28:28:81.28:1267,81,0	1/1:0,30:30:90.22:1295,90,0	1/1:0,23:23:57.19:891,57,0	1/1:0,28:28:84.24:1243,84,0	1/1:1,20:21:57.19:879,57,0	1/1:0,23:23:63.21:985,63,0	1/1:0,14:14:42.14:655,42,0	1/1:0,24:24:69.23:1079,69,0	1/1:2,26:28:69.23:1079,69,0	1/1:0,14:14:36.12:563,36,0	1/1:0,29:29:84.29:1314,84,0	0/0:21,0:21:60.18:0,60,820	1/1:0,11:11:33.11:513,33,0	1/1:1,29:30:81.21:1228,81,0	1/1:0,32:32:93.32:1454,93,0	1/1:0,20:20:51.09:768,51,0	1/1:0,23:23:54.18:845,54,0	1/1:0,35:35:90.31:1408,90,0	1/1:2,24:26:60.20:939,60,0	1/1:0,22:22:66.22:1019,66,0	1/1:1,24:25:63.21:985,63,0	1/1:0,11:11:30.10:469,30,0
chr10	99314157	.	AG	A	2828.39	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.820;DP=551;FS=13.336;HRun=2;HaplotypeScore=52.6126;InbreedingCoeff=0.9987;MQ=64.04;MQ0=1;MQRankSum=-3.357;QD=30.74;ReadPosRankSum=-1.466;VQSLOD=1.5917;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:66.21:855,66,0	0/0:8,0:8:24.08:0,24,360	0/0:22,0:21:56.83:0,57,761	0/0:12,0:11:30.10:0,30,434	0/0:34,0:34:93.30:0,93,1370	0/0:18,0:18:54.16:0,54,772	0/0:14,0:14:42.13:0,42,610	1/1:0,30:22:66.13:794,66,0	0/0:20,0:20:57.19:0,57,853	0/0:22,0:22:66.16:0,66,946	0/0:19,0:19:51.17:0,51,763	0/0:13,0:13:39.12:0,39,564	0/0:12,0:12:33.11:0,33,493	0/0:10,0:10:27.09:0,27,404	0/0:23,0:23:69.23:0,69,1032	0/0:13,0:13:39.13:0,39,579	0/0:27,0:27:81.23:0,81,1187	0/0:25,1:26:36.61:0,37,1016	0/0:22,0:22:66.19:0,66,945	0/0:28,0:28:84.26:0,84,1218	0/0:14,0:14:42.11:0,42,586	0/0:17,0:17:51.17:0,51,762	0/0:23,0:23:66.19:0,66,946	0/0:22,0:22:66.22:0,66,989	0/0:23,0:23:69.23:0,69,1023	1/1:2,25:27:33.25:873,33,0	0/0:17,0:17:51.17:0,51,762	1/1:0,12:12:36.12:467,36,0
chr10	99314426	.	G	GAGAA	7667.49	PASS	AB=0.930;AC=38;AF=0.679;AN=56;BaseQRankSum=0.631;DP=606;FS=43.159;HRun=0;HaplotypeScore=155.2997;InbreedingCoeff=0.1966;MQ=53.34;MQ0=12;MQRankSum=-0.772;QD=14.83;ReadPosRankSum=0.767;VQSLOD=2.3314;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:21.74:0,22,204	1/1:2,0:2:3:27,3,0	0/0:17,0:11:21.04:0,21,228	0/0:34,0:13:24.58:0,25,280	0/1:27,0:27:14.47:289,0,14	0/1:18,0:18:11.93:151,0,12	1/1:24,0:24:28.39:439,28,0	1/1:36,0:34:69.90:624,70,0	1/1:20,0:20:18.48:317,18,0	0/1:8,12:20:17.15:431,0,17	1/1:12,8:20:27.81:236,28,0	0/1:24,0:23:7.17:205,0,7	1/1:15,0:15:6.67:222,7,0	1/1:21,0:21:21.85:472,22,0	0/1:21,0:20:7.67:278,0,8	0/1:28,0:28:29.45:403,0,29	0/1:17,0:17:21.02:203,0,21	0/0:14,0:13:27.51:0,28,406	0/1:9,6:17:62.63:235,0,63	1/1:24,0:23:29.70:561,30,0	1/1:21,0:20:41.59:396,42,0	1/1:22,0:21:38.10:410,38,0	1/1:17,0:17:15.42:184,15,0	1/1:19,0:18:27.45:251,27,0	1/1:26,0:25:14.15:312,14,0	0/1:38,0:37:99:281,0,316	1/1:26,0:27:50.13:736,50,0	0/1:11,0:10:4.51:5,0,86
chr10	99314428	.	GAA	G	5638.61	PASS	AB=0.985;AC=39;AF=0.696;AN=56;BaseQRankSum=-2.023;DP=600;FS=10.792;HRun=3;HaplotypeScore=142.0850;InbreedingCoeff=0.1217;MQ=56.57;MQ0=9;MQRankSum=0.307;QD=10.84;ReadPosRankSum=-1.654;VQSLOD=0.5204;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,1:25:28.85:274,29,0	1/1:1,0:1:3:25,3,0	0/0:18,0:12:23.52:0,24,259	0/0:30,0:13:35.50:0,36,346	1/1:26,0:26:13.18:318,13,0	0/0:18,0:18:1.01:0,1,91	1/1:24,0:24:49.22:431,49,0	1/1:37,0:35:45:665,45,0	0/1:20,0:20:33.04:33,0,48	0/1:21,0:20:39.24:163,0,39	0/1:19,1:20:23.41:162,0,23	0/1:25,0:24:19.77:66,0,20	1/1:14,0:14:7.97:201,8,0	0/1:20,1:21:8.94:219,0,9	0/1:21,1:21:12.10:204,0,12	1/1:26,0:26:20.62:419,21,0	1/1:16,0:16:44.09:285,44,0	0/0:14,0:13:22.20:0,22,450	0/1:17,0:17:48.74:118,0,49	1/1:24,0:23:14.42:300,14,0	1/1:23,0:22:16.61:277,17,0	1/1:21,0:20:10.63:204,11,0	0/1:17,0:17:32.30:50,0,32	1/1:18,0:17:2.41:184,2,0	0/1:26,0:25:25.06:39,0,25	1/1:36,1:36:15.24:437,15,0	1/1:28,0:27:18.09:391,18,0	1/1:10,1:11:3.41:173,3,0
chr10	99314430	.	A	AAGAG	15133.74	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=1.208;DP=597;FS=0.705;HRun=0;HaplotypeScore=128.8950;InbreedingCoeff=0.7707;MQ=59.24;MQ0=7;MQRankSum=-2.300;QD=28.18;ReadPosRankSum=2.138;VQSLOD=4.9659;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:11.20:54,0,11	1/1:1,0:1:3.01:52,3,0	0/0:18,0:13:21.22:0,21,451	0/0:29,0:14:26.94:0,27,504	1/1:23,0:23:35.63:609,36,0	1/1:2,16:18:9.03:230,9,0	1/1:24,0:26:54.16:882,54,0	1/1:38,0:36:95.92:1398,96,0	1/1:2,10:22:18.06:431,18,0	1/1:17,3:20:49.10:858,49,0	1/1:16,3:21:39.50:474,39,0	1/1:5,15:24:15.05:313,15,0	1/1:13,0:14:30.53:461,31,0	1/1:13,1:21:41.26:762,41,0	1/1:18,0:21:45:647,45,0	1/1:25,0:26:66.29:941,66,0	1/1:15,0:16:27.39:420,27,0	0/0:13,0:12:25.97:0,26,425	1/1:14,1:16:34.75:520,35,0	1/1:21,0:23:54.17:1005,54,0	1/1:21,1:21:48.10:728,48,0	1/1:15,0:18:48.07:758,48,0	1/1:1,13:17:15.05:276,15,0	1/1:18,0:19:36.09:552,36,0	1/1:3,17:26:23.44:461,23,0	1/1:36,1:36:44.64:862,45,0	1/1:24,1:26:73.15:1280,73,0	1/1:11,0:11:19.09:160,19,0
chr10	99314444	.	GA	G	449.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.133;DP=580;FS=3.982;HRun=2;HaplotypeScore=144.5126;InbreedingCoeff=0.8124;MQ=63.62;MQ0=3;MQRankSum=-0.658;QD=19.55;ReadPosRankSum=0.946;VQSLOD=3.7460;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:42.13:544,42,0	0/0:1,0:1:3.01:0,3,45	0/0:23,0:18:47.51:0,48,652	0/0:34,0:19:47.82:0,48,622	0/0:22,0:22:42.14:0,42,629	0/0:13,0:13:11.88:0,12,180	0/0:27,0:27:66.21:0,66,969	0/0:38,0:37:99:0,111,1620	0/0:20,0:20:24.01:0,24,353	0/0:24,0:23:57.19:0,57,838	0/0:19,0:19:47.75:0,48,683	0/0:17,0:16:14.97:0,15,223	0/0:16,0:16:36.12:0,36,539	0/0:19,0:19:36.05:0,36,497	0/0:16,0:16:33.07:0,33,470	0/0:26,0:26:69.23:0,69,1031	0/0:14,0:14:29.99:0,30,378	0/0:11,0:11:27.09:0,27,402	0/0:17,0:17:45.14:0,45,630	0/0:22,0:21:57.16:0,57,834	0/0:23,0:23:51.12:0,51,734	0/0:21,0:20:48:0,48,714	0/0:18,0:18:37.06:0,37,408	0/0:19,0:18:39.06:0,39,540	0/0:23,0:23:27.02:0,27,385	0/0:36,0:35:99:0,99,1477	0/0:28,0:27:72.24:0,72,1057	0/0:10,0:10:27.09:0,27,404
chr10	99314858	.	A	ATG	2445.98	PASS	AB=0.872;AC=23;AF=0.460;AN=50;BaseQRankSum=-5.857;DP=592;FS=3.010;HRun=0;HaplotypeScore=117.7465;InbreedingCoeff=-0.2210;MQ=65.05;MQ0=9;MQRankSum=0.968;QD=5.92;ReadPosRankSum=2.449;VQSLOD=3.2791;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:34:1.93:0,2,16	0/0:6,0:7:2.80:0,3,13	./.	./.	./.	0/1:23,0:23:53.15:53,0,63	0/1:15,9:24:10.84:115,0,11	0/1:9,0:13:0:0,0,0	0/0:12,0:21:22.73:0,23,112	0/1:24,6:30:66.99:144,0,67	0/1:12,1:15:35.26:35,0,44	1/1:20,2:22:17.27:227,17,0	0/1:12,3:15:67.39:67,0,122	0/1:19,2:21:92.83:172,0,93	0/1:16,6:22:71.48:112,0,71	1/1:22,0:24:21.03:231,21,0	1/1:30,11:40:28.23:571,28,0	0/0:15,0:19:8.58:0,9,174	0/0:17,0:17:8.81:0,9,60	0/1:8,4:12:67.01:67,0,120	0/1:45,3:47:31.06:338,0,31	0/1:8,1:9:3.35:56,0,3	0/1:9,2:11:13:84,0,13	0/1:23,1:24:23.46:79,0,23	0/1:16,7:24:35.25:35,0,55	0/1:13,0:19:30.25:33,0,30	1/1:8,4:12:12.47:177,12,0	0/0:8,0:9:2.84:0,3,14
chr10	99314996	.	TGTGTGA	T	3653.76	PASS	AB=0.995;AC=41;AF=0.732;AN=56;BaseQRankSum=11.043;DP=702;FS=5.418;HRun=0;HaplotypeScore=195.1744;InbreedingCoeff=0.1857;MQ=64.31;MQ0=9;MQRankSum=-1.604;QD=6.08;ReadPosRankSum=5.848;VQSLOD=1.9951;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:42:22:22,0,229	0/1:11,0:11:2.49:36,0,2	0/0:49,0:19:50.09:0,50,952	0/0:32,0:15:42.42:0,42,617	1/1:16,0:16:26.44:116,26,0	0/1:13,0:13:7.36:45,0,7	1/1:25,1:26:20.99:186,21,0	0/1:24,0:23:99:151,0,746	1/1:23,1:23:4.74:180,5,0	1/1:30,1:31:25.92:347,26,0	1/1:23,0:23:33.41:150,33,0	1/1:25,1:26:33.68:211,34,0	1/1:13,1:14:21.74:152,22,0	1/1:27,1:28:14.25:138,14,0	1/1:16,0:16:23.27:103,23,0	0/1:19,0:19:37.08:37,0,321	1/1:34,0:34:39.01:175,39,0	0/0:20,0:20:57.16:0,57,1724	1/1:14,1:15:28.97:344,29,0	1/1:18,0:18:19.48:88,19,0	0/1:43,2:44:27.71:344,0,28	1/1:24,0:24:2.12:119,2,0	1/1:21,0:21:19.60:88,20,0	1/1:39,0:39:17.57:233,18,0	1/1:23,2:24:37.06:226,37,0	0/1:25,0:25:8.30:8,0,1165	0/1:21,0:21:19.36:92,0,19	0/1:21,0:21:63.21:63,0,866
chr10	99314998	.	TGTGA	T	13947.74	PASS	AB=0.992;AC=45;AF=0.804;AN=56;BaseQRankSum=-1.708;DP=696;FS=3.550;HRun=0;HaplotypeScore=142.2258;InbreedingCoeff=0.4277;MQ=66.90;MQ0=9;MQRankSum=-2.019;QD=23.32;ReadPosRankSum=3.970;VQSLOD=4.7141;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:41:30.37:30,0,112	1/1:0,11:11:14.98:256,15,0	0/0:47,0:21:53.03:0,53,788	0/0:30,0:16:42.49:0,42,551	1/1:0,16:16:29.68:583,30,0	1/1:1,12:13:14.64:296,15,0	1/1:5,22:27:24.01:363,24,0	0/1:25,0:24:99:201,0,408	1/1:3,20:22:32.51:686,33,0	1/1:1,28:29:80.78:1177,81,0	1/1:1,21:22:36.12:711,36,0	1/1:1,24:25:36.12:691,36,0	1/1:1,15:16:24.08:445,24,0	1/1:3,25:28:39.13:772,39,0	1/1:0,17:17:27.09:514,27,0	0/1:18,0:18:66.74:140,0,67	1/1:2,31:33:42.14:830,42,0	0/0:21,0:21:60.15:0,60,1353	1/1:2,12:14:37.59:546,38,0	1/1:0,18:18:21.07:415,21,0	1/1:25,20:44:76.24:1365,76,0	1/1:1,24:25:29.48:647,29,0	1/1:0,20:20:23.86:452,24,0	1/1:3,35:38:63.13:1201,63,0	1/1:4,21:24:39.10:752,39,0	0/1:24,0:24:61.48:61,0,684	1/1:2,18:20:27.96:590,28,0	0/1:24,1:25:99:223,0,401
chr10	99315000	.	TGA	T	7225.53	PASS	AB=0.971;AC=46;AF=0.821;AN=56;BaseQRankSum=8.408;DP=680;FS=0.957;HRun=0;HaplotypeScore=148.2193;InbreedingCoeff=0.5117;MQ=66.66;MQ0=9;MQRankSum=-2.697;QD=12.31;ReadPosRankSum=4.266;VQSLOD=4.8868;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:11.13:59,0,11	1/1:11,0:11:14.94:118,15,0	0/0:44,0:20:47.04:0,47,544	0/0:26,0:14:42.02:0,42,474	1/1:16,0:16:29.84:239,30,0	1/1:12,0:12:14.98:124,15,0	1/1:27,0:27:23.82:178,24,0	0/1:25,0:24:62.91:247,0,63	1/1:22,1:22:38.96:339,39,0	1/1:29,0:29:74.71:604,75,0	1/1:21,1:22:35.95:298,36,0	1/1:25,0:25:35.95:298,36,0	1/1:16,0:16:23.92:190,24,0	1/1:27,0:27:38.95:323,39,0	1/1:17,0:17:26.91:218,27,0	1/1:11,7:18:45.03:482,45,0	1/1:31,1:32:41.95:349,42,0	0/0:23,0:23:66.11:0,66,941	1/1:14,0:14:35.86:290,36,0	1/1:18,0:18:20.97:174,21,0	1/1:43,0:42:81.05:661,81,0	1/1:24,1:25:35.81:314,36,0	1/1:20,0:20:23.25:190,23,0	1/1:37,0:37:62.83:511,63,0	1/1:25,0:24:38.89:324,39,0	0/1:22,1:23:99:110,0,236	1/1:18,1:19:32.97:290,33,0	0/1:23,2:25:95.84:295,0,96
chr10	99315799	.	CT	C	11015.11	PASS	AB=0.913;AC=51;AF=0.911;AN=56;BaseQRankSum=3.007;DP=676;FS=1.882;HRun=11;HaplotypeScore=74.3069;InbreedingCoeff=0.7756;MQ=73.57;MQ0=1;MQRankSum=-3.165;QD=17.46;ReadPosRankSum=4.204;VQSLOD=5.7832;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:32:57.03:165,57,0	1/1:4,8:12:20.87:164,21,0	0/1:19,2:17:14.03:14,0,206	0/0:14,0:14:13.12:0,13,186	1/1:1,27:29:79.81:631,80,0	1/1:2,17:19:44.94:370,45,0	1/1:3,16:19:38.95:320,39,0	1/1:8,23:31:65.84:534,66,0	1/1:3,13:16:32.96:271,33,0	1/1:6,30:36:89.84:732,90,0	1/1:4,20:24:59.92:492,60,0	1/1:1,16:18:40.99:326,41,0	1/1:3,14:17:35:277,35,0	1/1:1,17:18:44.95:369,45,0	1/1:2,20:22:56.92:468,57,0	1/1:0,10:11:26.01:203,26,0	1/1:5,26:31:59.92:493,60,0	0/0:30,1:31:62.45:0,62,827	1/1:11,27:37:55.32:653,55,0	1/1:2,15:17:41.92:345,42,0	1/1:7,18:25:47.93:394,48,0	1/1:8,24:34:72.91:572,73,0	1/1:5,26:32:44.93:565,45,0	1/1:0,12:12:32.96:271,33,0	1/1:0,33:33:89.90:739,90,0	1/1:7,33:40:66.86:756,67,0	1/1:4,29:34:83.12:672,83,0	1/1:0,9:9:26.97:222,27,0
chr10	99317113	.	C	CT	558.16	PASS	AB=0.957;AC=4;AF=0.071;AN=56;BaseQRankSum=-2.245;DP=566;FS=4.283;HRun=11;HaplotypeScore=61.5024;InbreedingCoeff=0.4245;MQ=75.84;MQ0=0;MQRankSum=0.665;QD=8.59;ReadPosRankSum=-0.501;VQSLOD=2.2573;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:30:63.09:630,63,0	0/0:8,0:8:23.90:0,24,184	0/0:15,0:15:5.75:0,6,113	0/1:14,0:13:29.32:29,0,39	0/0:31,0:31:89.63:0,90,692	0/0:14,0:15:34.86:0,35,255	0/0:18,0:19:40.86:0,41,306	0/0:33,0:33:77.66:0,78,600	0/0:17,0:17:22.61:0,23,300	0/0:31,0:31:55:0,55,556	0/0:20,0:21:35.69:0,36,336	0/0:12,0:12:19.88:0,20,234	0/0:14,0:14:23.85:0,24,186	0/0:11,0:11:29.81:0,30,223	0/0:21,0:21:53.78:0,54,416	0/0:16,0:16:41.22:0,41,309	0/0:22,0:23:55.76:0,56,417	0/1:19,2:21:13.12:13,0,273	0/0:19,0:19:48.64:0,49,369	0/0:31,0:31:80.55:0,81,615	0/0:14,0:14:32.84:0,33,251	0/0:20,0:22:60.84:0,61,450	0/0:24,0:25:64.60:0,65,480	0/0:16,0:16:44.78:0,45,343	0/0:22,0:22:56.50:0,56,428	0/0:22,0:22:48.64:0,49,368	0/0:25,0:25:68.66:0,69,525	0/0:17,0:18:10.52:0,11,254
chr10	99319587	.	ATATC	A	3064.27	PASS	AB=0.595;AC=13;AF=0.250;AN=52;BaseQRankSum=-3.375;DP=638;FS=3.912;HRun=0;HaplotypeScore=138.4776;InbreedingCoeff=0.8406;MQ=63.40;MQ0=1;MQRankSum=2.589;QD=18.92;ReadPosRankSum=0.054;VQSLOD=3.3219;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,8:22:24.08:346,24,0	0/0:8,0:8:9.03:0,9,163	./.	./.	0/0:29,0:29:45.15:0,45,1018	0/0:16,0:23:30.10:0,30,502	0/0:13,0:13:12.51:0,13,253	0/0:35,0:35:1.25:0,1,3	0/0:26,0:25:16.28:0,16,151	0/0:31,0:34:49.66:0,50,873	0/0:12,0:20:22.30:0,22,344	0/0:17,0:22:31.65:0,32,478	0/0:21,0:27:40.02:0,40,664	0/0:19,0:26:44.50:0,45,708	0/0:25,0:25:33.10:0,33,723	0/0:19,0:18:24.08:0,24,539	0/0:20,0:20:24.08:0,24,529	0/0:15,0:25:30.10:0,30,547	1/1:10,4:14:12.04:184,12,0	1/1:8,12:20:33.11:495,33,0	1/1:10,9:19:21.03:295,21,0	0/0:23,0:34:58.04:0,58,907	0/0:25,0:26:21.03:0,21,283	0/0:14,0:17:22.95:0,23,368	0/0:10,0:21:24.08:0,24,411	1/1:9,12:21:36.12:544,36,0	1/1:23,21:43:72.24:1085,72,0	0/1:7,15:21:45.83:297,0,46
chr10	99319709	.	ACT	A	19901.11	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=10.863;DP=636;FS=7.803;HRun=0;HaplotypeScore=87.6863;InbreedingCoeff=0.9894;MQ=83.10;MQ0=2;MQRankSum=-2.714;QD=42.71;ReadPosRankSum=7.342;VQSLOD=6.4155;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:75.26:0,75,1505	1/1:0,4:5:9.03:147,9,0	0/0:25,0:25:69.81:0,70,1188	0/0:24,0:23:59.67:0,60,973	1/1:0,26:26:72.25:1173,72,0	1/1:0,15:15:39.13:634,39,0	1/1:0,16:16:45.15:734,45,0	0/0:39,0:39:99:0,117,2268	1/1:0,28:28:78.22:1242,78,0	1/1:0,26:26:78.23:1241,78,0	1/1:0,25:24:54.18:880,54,0	1/1:0,26:26:69.24:1125,69,0	1/1:0,25:25:60.20:978,60,0	1/1:0,22:22:60.20:978,60,0	1/1:0,24:24:69.24:1125,69,0	1/1:0,16:16:45.15:734,45,0	1/1:0,19:19:51.17:831,51,0	0/0:15,0:15:45.08:0,45,813	1/1:0,11:11:33.08:510,33,0	1/1:0,29:29:72.25:1173,72,0	1/1:0,24:24:69.24:1124,69,0	1/1:0,22:22:60.20:974,60,0	1/1:0,18:18:42.14:682,42,0	1/1:0,24:24:57.19:929,57,0	1/1:0,23:23:63.22:1026,63,0	0/0:29,0:29:87.26:0,87,1650	1/1:0,42:42:99:1662,102,0	0/0:12,0:12:36.12:0,36,731
chr10	99320074	.	TCACATACACACACACA	T	296.57	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.752;DP=489;FS=9.557;HRun=0;HaplotypeScore=191.9230;InbreedingCoeff=0.8588;MQ=67.74;MQ0=20;MQRankSum=-0.179;QD=9.27;ReadPosRankSum=-2.815;VQSLOD=1.4421;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:27.69:0,28,400	0/0:6,0:6:13.84:0,14,583	0/0:50,0:24:46.25:0,46,507	0/0:53,0:26:40.52:0,41,476	0/0:13,0:13:19.40:0,19,630	0/0:15,0:15:35.53:0,36,770	0/0:23,0:23:53.92:0,54,1281	1/1:12,0:12:19.56:215,20,0	0/0:12,0:12:14.63:0,15,609	0/0:21,0:21:60.09:0,60,1500	0/0:9,0:9:10.70:0,11,279	0/0:12,0:12:29.98:0,30,725	0/0:12,0:12:29.92:0,30,610	0/0:12,0:12:24.60:0,25,358	0/0:19,0:19:47.98:0,48,1262	0/0:8,0:7:20.95:0,21,484	0/0:22,0:22:50.64:0,51,1228	0/0:6,0:6:14.96:0,15,481	0/0:8,0:8:15.03:0,15,548	0/0:17,0:16:32.07:0,32,781	0/0:23,0:23:31.97:0,32,1096	0/0:25,0:25:44.90:0,45,1214	0/0:10,0:10:21.03:0,21,721	0/0:21,0:21:23.48:0,23,469	0/0:13,0:13:15.92:0,16,881	1/1:5,10:13:3.38:137,3,0	0/0:13,0:13:15.94:0,16,354	1/1:5,0:5:8.97:70,9,0
chr10	99320079	.	T	TACACAC	2306.74	PASS	AB=1.000;AC=43;AF=0.935;AN=46;BaseQRankSum=-3.682;DP=508;FS=2.969;HRun=0;HaplotypeScore=127.4428;InbreedingCoeff=0.1116;MQ=60.98;MQ0=26;MQRankSum=3.161;QD=6.61;ReadPosRankSum=1.006;VQSLOD=2.6282;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:35:2.85:0,3,21	1/1:6,0:6:6.77:38,7,0	./.	./.	1/1:14,0:14:11.30:119,11,0	1/1:16,0:16:6.02:85,6,0	1/1:23,0:23:14.06:185,14,0	./.	1/1:13,0:13:5.99:50,6,0	1/1:24,0:24:17.49:195,17,0	1/1:12,0:12:7.74:59,8,0	1/1:13,0:13:6.01:95,6,0	1/1:11,4:16:3.48:96,3,0	1/1:14,0:14:7.97:58,8,0	1/1:19,0:19:12:117,12,0	1/1:6,0:8:2.08:16,2,0	1/1:25,0:25:20.95:304,21,0	0/1:9,0:9:13.52:37,0,14	1/1:5,0:5:6.01:60,6,0	1/1:17,0:16:8.12:203,8,0	1/1:21,0:21:5.96:68,6,0	1/1:23,0:23:14.87:193,15,0	1/1:12,0:12:5.87:62,6,0	1/1:22,0:21:5.52:86,6,0	1/1:15,0:15:15:184,15,0	./.	1/1:11,6:16:3.01:95,3,0	./.
chr10	99321212	.	TTGTGTGTG	T	5023.33	PASS	AB=0.750;AC=45;AF=0.865;AN=52;BaseQRankSum=0.007;DP=580;FS=1.517;HRun=0;HaplotypeScore=151.6497;InbreedingCoeff=0.3043;MQ=60.15;MQ0=12;MQRankSum=-0.820;QD=10.87;ReadPosRankSum=2.235;VQSLOD=3.4335;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,5:26:5.97:60,6,0	1/1:4,5:9:12.04:262,12,0	./.	0/0:24,0:17:1.55:0,2,4	1/1:9,5:15:11.84:137,12,0	1/1:27,6:34:12.04:280,12,0	0/0:14,0:21:5.05:0,5,181	./.	1/1:10,7:17:12.04:280,12,0	1/1:17,0:16:3.01:75,3,0	1/1:16,4:20:6.02:75,6,0	0/1:10,5:15:99:283,0,106	1/1:11,2:12:6.02:149,6,0	1/1:10,11:21:21.07:444,21,0	1/1:15,5:21:21:447,21,0	1/1:15,6:21:9.50:225,9,0	1/1:17,7:24:15.01:354,15,0	1/1:9,0:9:2.90:16,3,0	1/1:27,4:29:5.91:134,6,0	1/1:18,6:22:10.27:190,10,0	0/0:28,0:27:0:0,0,0	1/1:13,3:16:3:27,3,0	1/1:10,8:20:14.87:298,15,0	1/1:22,6:27:12.04:298,12,0	1/1:11,5:16:12.04:262,12,0	1/1:24,0:28:12.48:190,12,0	1/1:14,8:23:17.81:429,18,0	1/1:6,0:10:6.02:112,6,0
chr10	99321829	.	GGTGTGT	G	3090.32	PASS	AB=0.807;AC=38;AF=0.760;AN=50;BaseQRankSum=0.721;DP=521;FS=1.168;HRun=0;HaplotypeScore=117.8928;InbreedingCoeff=0.4333;MQ=68.12;MQ0=15;MQRankSum=-3.247;QD=9.84;ReadPosRankSum=0.314;VQSLOD=2.7181;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:6.73:0,7,143	1/1:6,0:6:6:82,6,0	./.	0/0:31,0:20:0.47:0,0,1	1/1:16,2:18:3.44:21,3,0	1/1:8,4:13:12.04:192,12,0	1/1:9,7:17:6.86:83,7,0	0/0:26,0:24:2.04:0,2,6	1/1:20,5:25:27.05:506,27,0	1/1:9,5:14:3:56,3,0	./.	1/1:16,2:18:15.05:276,15,0	1/1:11,0:12:18.06:325,18,0	1/1:10,5:15:15.69:241,16,0	1/1:11,5:19:21.05:325,21,0	1/1:5,0:8:6.02:84,6,0	1/1:15,9:23:12.04:243,12,0	0/0:15,0:16:24.08:0,24,609	./.	1/1:18,3:20:5.89:99,6,0	0/0:35,0:35:0.28:0,0,1	0/1:11,3:16:0:0,0,0	1/1:12,4:15:6.49:95,6,0	0/1:19,3:23:10.44:34,0,10	1/1:11,0:11:0.15:143,0,0	1/1:12,3:15:9.01:145,9,0	1/1:6,3:9:6.02:122,6,0	1/1:8,1:11:8.53:144,9,0
chr10	99322577	.	CGT	C	5404.60	PASS	AB=0.818;AC=47;AF=0.839;AN=56;BaseQRankSum=0.870;DP=595;FS=0.000;HRun=0;HaplotypeScore=110.5404;InbreedingCoeff=0.6109;MQ=44.86;MQ0=23;MQRankSum=2.379;QD=12.01;ReadPosRankSum=3.138;VQSLOD=4.7303;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:1.80:21,2,0	1/1:4,6:10:12.04:144,12,0	0/0:47,0:10:5.88:0,6,48	0/0:60,0:14:8.99:0,9,106	1/1:8,11:19:20.87:216,21,0	1/1:8,4:12:8.51:82,9,0	1/1:11,23:34:26.69:327,27,0	0/0:19,0:18:3.01:0,3,34	1/1:20,5:24:15.02:167,15,0	1/1:10,6:16:39:435,39,0	1/1:5,4:9:21.05:243,21,0	1/1:10,4:14:21.06:255,21,0	1/1:15,6:20:32.52:342,33,0	1/1:11,9:20:27.07:316,27,0	1/1:6,1:8:11.87:123,12,0	1/1:14,7:21:18.03:215,18,0	1/1:28,8:35:55.56:625,56,0	0/0:19,0:16:29.31:0,29,424	0/1:14,4:16:24.40:205,0,24	1/1:7,4:10:14.20:152,14,0	1/1:42,11:48:26.26:298,26,0	1/1:10,6:18:17.87:184,18,0	1/1:5,4:10:6.02:73,6,0	1/1:25,12:37:45.14:546,45,0	1/1:13,3:16:12.04:145,12,0	1/1:10,3:12:13.48:147,13,0	1/1:5,1:5:9.03:109,9,0	1/1:6,0:6:3.01:36,3,0
chr10	99322594	.	GTGCA	G	1481.67	PASS	AB=0.963;AC=19;AF=0.339;AN=56;BaseQRankSum=0.832;DP=573;FS=7.556;HRun=0;HaplotypeScore=140.3830;InbreedingCoeff=-0.4963;MQ=43.95;MQ0=27;MQRankSum=-2.325;QD=4.36;ReadPosRankSum=3.575;VQSLOD=2.0007;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:2.69:0,3,242	0/1:9,0:9:4.84:44,0,5	0/0:34,0:3:7.27:0,7,92	0/0:32,0:3:9.03:0,9,180	0/1:21,1:23:51.11:93,0,51	0/1:14,0:14:14.16:58,0,14	0/1:32,0:30:19.88:20,0,78	0/1:17,0:12:1.65:2,0,210	0/1:13,8:20:22.27:111,0,22	0/1:16,0:16:46.06:188,0,46	0/1:13,0:13:32.81:33,0,44	0/0:14,0:13:9.66:0,10,64	0/1:19,1:19:33.36:97,0,33	0/1:21,0:19:49.53:81,0,50	0/0:7,0:7:10.47:0,10,49	0/0:14,0:14:3.64:0,4,50	0/1:32,0:31:60.76:203,0,61	0/0:17,0:16:42.09:0,42,844	0/1:17,1:16:99:177,0,217	0/1:16,1:16:65.28:65,0,100	0/0:55,0:49:29.05:0,29,159	0/1:19,3:21:36.60:90,0,37	0/1:11,1:12:22.70:23,0,37	0/0:37,0:36:25.04:0,25,176	0/1:17,0:17:7.60:8,0,21	0/1:18,0:17:99:198,0,139	0/1:7,0:6:10.36:10,0,17	0/1:11,0:11:33.93:134,0,34
chr10	99322597	.	CACGT	C	1523.15	PASS	AB=0.948;AC=20;AF=0.357;AN=56;BaseQRankSum=2.207;DP=564;FS=15.309;HRun=0;HaplotypeScore=138.3192;InbreedingCoeff=-0.4807;MQ=44.13;MQ0=26;MQRankSum=-1.859;QD=4.24;ReadPosRankSum=3.819;VQSLOD=1.0570;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:22.02:0,22,363	0/1:9,0:9:18.79:27,0,19	0/0:34,0:3:7.25:0,7,60	0/0:33,0:3:9.03:0,9,121	0/1:20,2:23:70.96:125,0,71	0/1:13,1:14:16.78:80,0,17	0/1:32,0:30:35.24:35,0,107	0/1:20,0:15:7.81:8,0,204	0/1:21,0:20:1.73:120,0,2	0/1:9,8:17:72.41:174,0,72	0/1:14,0:14:12.94:13,0,51	0/1:14,0:13:22.95:23,0,32	0/1:19,0:18:10.96:96,0,11	0/1:20,0:18:43.37:44,0,43	0/0:6,0:6:11.59:0,12,76	0/0:13,0:14:5.50:0,5,57	0/1:32,0:31:96.73:143,0,97	0/0:16,0:15:38.49:0,38,600	0/1:18,0:16:99:186,0,195	0/1:18,0:17:70.67:71,0,84	0/0:50,0:45:29.10:0,29,135	0/1:22,1:22:41.18:43,0,41	0/1:13,0:13:25.02:52,0,25	0/0:35,1:35:19.23:0,19,150	0/1:9,8:17:6.63:7,0,28	0/1:14,4:17:99:246,0,280	0/1:6,0:5:6.81:13,0,7	0/1:11,0:11:10.92:174,0,11
chr10	99322599	.	CGT	C	2363	PASS	AB=0.839;AC=47;AF=0.870;AN=54;BaseQRankSum=0.363;DP=577;FS=9.200;HRun=0;HaplotypeScore=127.8039;InbreedingCoeff=0.0079;MQ=44.52;MQ0=27;MQRankSum=1.111;QD=4.62;ReadPosRankSum=2.669;VQSLOD=2.1620;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,2:16:5.29:5,0,124	1/1:7,0:9:6.02:67,6,0	./.	0/0:32,0:4:3.01:0,3,45	1/1:19,2:22:15.30:112,15,0	1/1:8,6:15:3.28:47,3,0	1/1:29,3:32:17.49:180,17,0	1/1:17,4:17:3.73:127,4,0	1/1:15,5:21:14.84:135,15,0	1/1:16,1:18:14.93:182,15,0	1/1:7,6:14:6.01:67,6,0	1/1:9,2:13:11.66:82,12,0	1/1:14,2:17:17.88:180,18,0	1/1:13,3:18:5.85:47,6,0	1/1:4,3:7:3.01:33,3,0	1/1:7,0:15:5.66:28,6,0	1/1:20,13:32:14.82:254,15,0	0/1:14,0:14:18.29:18,0,118	1/1:11,8:16:27.05:285,27,0	0/1:8,3:16:28.01:110,0,28	1/1:39,3:47:11.42:89,11,0	1/1:16,5:22:11.50:101,12,0	1/1:9,2:13:10.89:85,11,0	0/1:25,12:38:20.89:80,0,21	1/1:14,1:17:2.84:14,3,0	0/1:18,2:19:74.55:75,0,248	1/1:3,0:5:2.84:14,3,0	1/1:9,1:11:7.98:75,8,0
chr10	99329876	.	T	TA	2146.66	PASS	AB=0.766;AC=43;AF=0.768;AN=56;BaseQRankSum=-4.753;DP=273;FS=16.188;HRun=13;HaplotypeScore=35.5644;InbreedingCoeff=0.3669;MQ=54.78;MQ0=13;MQRankSum=-0.011;QD=9.29;ReadPosRankSum=-0.049;VQSLOD=0.6782;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:13:18.04:0,18,52	1/1:0,5:5:5.96:47,6,0	0/0:9,0:4:4.45:0,4,27	0/0:10,0:8:9.97:0,10,55	0/1:8,4:14:21.92:80,0,22	1/1:9,6:16:23.46:192,23,0	1/1:1,3:4:6.01:56,6,0	1/1:18,0:15:6.83:46,7,0	1/1:3,11:14:18.02:167,18,0	1/1:6,5:11:15.02:139,15,0	0/1:8,4:12:25.28:78,0,25	1/1:2,3:4:3:28,3,0	1/1:4,4:7:16.52:135,17,0	1/1:2,7:9:15.02:139,15,0	1/1:3,5:7:3:28,3,0	1/1:2,6:7:18.02:167,18,0	1/1:4,13:16:6.45:202,6,0	0/0:8,0:8:20.82:0,21,144	1/1:4,6:10:14.95:122,15,0	0/1:6,3:10:5.73:83,0,6	1/1:2,3:5:15.01:135,15,0	0/1:1,1:2:14.58:22,0,15	1/1:2,7:7:9.01:84,9,0	1/1:6,0:7:2.96:19,3,0	1/1:3,4:8:16.67:131,17,0	1/1:13,0:12:1.83:4,2,0	1/1:2,11:12:6.45:202,6,0	0/1:5,0:4:0:0,0,0
chr10	99330594	.	CG	C	2829.57	PASS	AB=0.764;AC=37;AF=0.661;AN=56;BaseQRankSum=0.023;DP=339;FS=16.138;HRun=10;HaplotypeScore=54.2686;InbreedingCoeff=0.5438;MQ=77.89;MQ0=0;MQRankSum=-0.033;QD=10.25;ReadPosRankSum=3.526;VQSLOD=0.9150;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:6.51:0,7,166	0/1:4,4:8:11.61:69,0,12	0/0:9,0:7:6.01:0,6,63	0/1:17,0:17:23.72:24,0,134	0/0:5,0:5:0:0,0,0	1/1:9,4:14:23.32:152,23,0	1/1:7,19:26:32.61:262,33,0	0/0:3,0:8:11.51:0,12,65	1/1:12,5:17:4.97:197,5,0	1/1:4,3:7:10.54:82,11,0	1/1:4,3:8:19.52:145,20,0	0/1:4,6:10:10.01:89,0,10	1/1:7,2:9:8.70:93,9,0	1/1:7,8:15:28.12:223,28,0	1/1:3,14:17:26.98:233,27,0	1/1:2,11:13:11.98:100,12,0	1/1:5,16:21:20.99:182,21,0	0/0:14,0:14:33.95:0,34,343	1/1:2,6:8:14.64:111,15,0	1/1:5,1:7:10.33:81,10,0	1/1:8,30:38:46.68:393,47,0	1/1:3,4:7:11.99:103,12,0	1/1:2,2:4:2.82:25,3,0	1/1:4,16:20:32.32:285,32,0	0/0:3,2:5:0:0,0,0	0/0:2,0:2:2.96:0,3,19	1/1:6,4:10:19.65:152,20,0	0/0:6,0:6:11.91:0,12,97
chr10	99330981	.	G	GA	8468.62	PASS	AB=0.612;AC=39;AF=0.696;AN=56;BaseQRankSum=-8.758;DP=569;FS=1.743;HRun=9;HaplotypeScore=53.3393;InbreedingCoeff=0.7537;MQ=64.45;MQ0=4;MQRankSum=1.821;QD=21.17;ReadPosRankSum=2.138;VQSLOD=5.6319;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,1:59:99:0,115,1100	0/1:2,6:8:5:178,0,5	0/0:11,0:9:18.90:0,19,178	0/0:11,0:9:23.98:0,24,203	1/1:3,20:24:59.91:613,60,0	1/1:4,18:21:42.11:465,42,0	1/1:5,19:23:7.03:304,7,0	0/0:27,0:27:54.27:0,54,505	1/1:0,21:21:48.13:531,48,0	1/1:2,25:27:65.60:674,66,0	1/1:5,17:21:51.14:562,51,0	1/1:6,11:17:33.97:364,34,0	0/1:3,8:10:4.89:178,0,5	1/1:3,15:18:36.10:398,36,0	1/1:3,18:21:42.11:465,42,0	1/1:2,9:11:18.05:199,18,0	1/1:2,28:29:66.18:730,66,0	0/0:21,0:20:50.99:0,51,442	1/1:5,13:19:44.62:456,45,0	1/1:4,16:20:35.98:365,36,0	0/1:7,6:12:11.02:118,0,11	1/1:3,15:18:42.11:457,42,0	1/1:7,9:15:4.79:251,5,0	1/1:2,18:20:42.11:465,42,0	1/1:6,11:17:21.06:232,21,0	0/0:26,1:27:32.08:0,32,512	1/1:4,17:21:42.11:465,42,0	0/0:13,0:12:23.98:0,24,208
chr10	99332848	.	CA	C	7479.51	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=5.982;DP=480;FS=6.844;HRun=9;HaplotypeScore=52.6828;InbreedingCoeff=0.9644;MQ=69.11;MQ0=4;MQRankSum=0.248;QD=22.19;ReadPosRankSum=5.138;VQSLOD=5.3072;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:25:56.98:0,57,309	1/1:1,11:12:27.01:247,27,0	0/0:13,1:10:16.86:0,17,175	0/0:13,1:10:13.93:0,14,160	1/1:1,22:23:60.02:549,60,0	1/1:0,14:14:36.02:330,36,0	1/1:1,7:8:21.01:192,21,0	0/0:31,0:30:69.20:0,69,796	1/1:0,14:14:36.02:329,36,0	1/1:3,12:15:4.40:295,4,0	1/1:0,19:19:57.03:521,57,0	1/1:0,12:12:36.02:330,36,0	1/1:1,12:13:36.02:328,36,0	1/1:0,17:17:45.02:412,45,0	1/1:0,16:16:33.02:302,33,0	1/1:2,10:12:30.02:275,30,0	1/1:2,18:20:45.02:412,45,0	0/0:24,1:25:32.70:0,33,619	1/1:1,16:16:45:405,45,0	1/1:4,18:22:51.02:467,51,0	1/1:2,15:17:36.02:329,36,0	1/1:0,7:7:15:137,15,0	1/1:5,15:20:42.01:384,42,0	1/1:2,18:20:39.02:357,39,0	1/1:2,15:17:45.02:412,45,0	0/0:16,1:17:20.67:0,21,484	1/1:3,19:22:51.02:467,51,0	0/0:16,0:16:48.14:0,48,554
chr10	99333636	.	T	TA	1097.94	PASS	AB=0.927;AC=24;AF=0.429;AN=56;BaseQRankSum=-1.274;DP=432;FS=1.025;HRun=13;HaplotypeScore=83.9526;InbreedingCoeff=-0.1904;MQ=73.54;MQ0=3;MQRankSum=-0.648;QD=3.41;ReadPosRankSum=-4.072;VQSLOD=-0.2316;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:15:28.70:158,29,0	0/0:5,0:5:7.59:0,8,31	0/0:26,0:17:0.72:0,1,80	0/1:15,0:10:6.31:6,0,13	0/0:20,2:22:2.86:0,3,69	0/0:20,1:21:19.65:0,20,164	0/1:11,1:12:26.97:62,0,27	1/1:17,0:20:15.37:73,15,0	0/1:12,1:13:6.07:6,0,73	0/1:15,2:17:33.24:33,0,56	0/1:21,1:22:13.26:13,0,74	0/0:6,0:6:13.06:0,13,52	0/1:6,0:6:15.35:15,0,27	0/0:8,0:8:2.14:0,2,9	0/0:16,0:16:4.22:0,4,77	0/0:5,1:6:7.59:0,8,30	0/1:25,1:26:59.03:59,0,71	0/1:15,1:16:7.19:7,0,97	0/1:14,0:14:4.55:5,0,43	0/1:26,4:30:63.68:115,0,64	0/1:13,1:14:49.58:50,0,71	0/1:4,1:5:14.68:40,0,15	0/1:6,0:6:2.11:39,0,2	0/1:10,2:12:44.08:75,0,44	0/1:9,4:13:43.40:101,0,43	1/1:24,0:27:55.09:319,55,0	0/1:23,1:24:23.81:24,0,103	1/1:7,0:15:12.61:60,13,0
chr10	99333701	.	TATCC	T	485.59	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.397;DP=377;FS=7.312;HRun=0;HaplotypeScore=78.5467;InbreedingCoeff=0.9196;MQ=76.96;MQ0=0;MQRankSum=-2.525;QD=34.69;ReadPosRankSum=0.748;VQSLOD=3.2827;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:30.10:580,30,0	0/0:7,0:7:21.07:0,21,575	0/0:12,0:12:36.12:0,36,874	0/0:6,0:6:15.05:0,15,383	0/0:21,0:21:60.21:0,60,1642	0/0:10,0:10:27.08:0,27,682	0/0:7,0:7:21.07:0,21,575	0/0:20,0:20:57.20:0,57,1518	0/0:10,0:10:30.10:0,30,819	0/0:27,0:27:81.28:0,81,2166	0/0:20,0:20:54.19:0,54,1479	0/0:14,0:14:36.12:0,36,985	0/0:9,0:9:27.09:0,27,737	0/0:8,0:8:24.04:0,24,595	0/0:7,0:7:14.96:0,15,411	0/0:9,0:9:23.76:0,24,657	0/0:16,0:16:45.15:0,45,1195	0/0:22,0:22:63.18:0,63,1664	0/0:15,0:15:45.15:0,45,1191	0/0:15,0:15:45.15:0,45,1233	0/0:14,0:14:42.14:0,42,1147	0/0:5,0:5:15.05:0,15,411	0/0:19,0:19:57.20:0,57,1562	0/0:6,0:6:18.06:0,18,492	0/0:16,0:16:48.14:0,48,1246	0/0:25,0:25:66.23:0,66,1786	0/0:17,0:17:44.71:0,45,1231	0/0:6,0:6:15.05:0,15,410
chr10	99333737	.	TTTAC	T	861.73	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=0.479;DP=395;FS=1.738;HRun=0;HaplotypeScore=75.9793;InbreedingCoeff=0.7602;MQ=74.27;MQ0=1;MQRankSum=-3.917;QD=19.58;ReadPosRankSum=-1.306;VQSLOD=2.8148;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:36.09:0,36,703	0/0:7,0:7:21.06:0,21,386	0/0:16,0:11:8.65:0,9,147	0/1:8,0:8:0.27:0,0,126	0/0:21,0:21:48.16:0,48,1014	0/0:16,0:16:45.15:0,45,1078	0/0:4,0:4:3.01:0,3,64	1/1:12,1:13:21.06:307,21,0	0/0:14,0:14:36.12:0,36,857	0/0:31,0:31:69.21:0,69,1427	0/0:21,0:21:33.10:0,33,720	0/0:19,0:19:42.14:0,42,929	0/0:13,0:13:36.11:0,36,737	0/0:7,0:7:12.03:0,12,238	0/0:12,0:12:30.10:0,30,651	0/0:8,0:8:15.05:0,15,374	0/0:20,0:20:54.15:0,54,1037	0/0:23,0:23:51.07:0,51,958	0/0:21,0:21:39.10:0,39,740	0/0:16,0:16:39.11:0,39,777	0/0:13,0:13:18.03:0,18,319	0/0:4,0:4:6.02:0,6,150	0/0:18,0:18:24.07:0,24,448	0/0:5,0:5:9.03:0,9,188	0/0:13,0:13:39.11:0,39,784	1/1:10,5:15:36.10:537,36,0	0/0:14,0:14:32.92:0,33,670	1/1:5,3:8:9.03:153,9,0
chr10	99334051	.	AACAC	A	2965.82	PASS	AB=0.732;AC=36;AF=0.720;AN=50;BaseQRankSum=-2.093;DP=584;FS=1.108;HRun=0;HaplotypeScore=119.3177;InbreedingCoeff=0.0985;MQ=57.27;MQ0=17;MQRankSum=-0.005;QD=6.28;ReadPosRankSum=2.139;VQSLOD=1.9350;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:39:0.01:0,0,0	0/1:4,3:7:16.53:84,0,17	./.	0/0:21,0:15:0.47:0,0,1	0/1:17,7:24:7:58,0,7	0/1:13,10:25:0.44:128,0,0	1/1:17,6:23:6.02:93,6,0	./.	1/1:11,6:15:3.01:47,3,0	1/1:32,3:35:31.87:388,32,0	0/1:11,8:20:6.96:85,0,7	1/1:6,11:17:6.02:93,6,0	1/1:12,6:18:9.03:140,9,0	1/1:12,5:17:3:47,3,0	1/1:9,3:8:3.01:47,3,0	./.	1/1:18,6:25:17.63:405,18,0	0/0:17,0:13:12.04:0,12,243	1/1:13,0:12:3.01:47,3,0	0/0:19,0:25:8.41:0,8,41	0/1:13,20:33:10.12:323,0,10	1/1:18,9:27:8.96:140,9,0	1/1:18,8:25:3.01:47,3,0	1/1:19,8:27:32.46:574,32,0	0/1:8,4:13:6.49:41,0,6	1/1:9,0:18:18.02:168,18,0	0/1:18,0:16:17.23:62,0,17	1/1:4,0:11:9.01:84,9,0
chr10	99334230	.	ACAGG	A	437.30	PASS	AB=0.950;AC=26;AF=0.500;AN=52;BaseQRankSum=6.961;DP=401;FS=10.974;HRun=0;HaplotypeScore=91.5010;InbreedingCoeff=0.2545;MQ=47.32;MQ0=22;MQRankSum=-4.219;QD=4.16;ReadPosRankSum=-2.484;VQSLOD=0.1818;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:78,0:78:99:0,138,4368	1/1:2,0:2:3.01:30,3,0	0/0:39,0:13:11.52:0,12,415	0/0:38,0:13:17.26:0,17,390	1/1:7,0:7:2.22:7,2,0	0/1:5,0:5:5.61:42,0,6	0/1:11,0:10:6.21:23,0,6	0/0:43,0:42:99:0,114,2485	0/1:2,4:6:0:0,0,0	1/1:6,0:6:0.57:62,1,0	0/0:3,0:3:2.90:0,3,16	0/1:10,0:10:14.55:21,0,15	1/1:2,0:2:2.92:17,3,0	./.	1/1:3,0:3:8.15:47,8,0	0/1:8,0:8:12.83:91,0,13	0/1:13,0:13:3.84:57,0,4	0/0:19,0:18:50.29:0,50,1231	1/1:7,0:3:3.89:35,4,0	0/1:2,0:2:9.55:10,0,14	./.	1/1:5,0:5:2.94:18,3,0	0/0:2,0:1:2.97:0,3,20	0/1:10,0:9:6.67:51,0,7	1/1:4,0:4:2.94:18,3,0	0/0:55,0:54:83.57:0,84,3269	1/1:4,0:4:8.46:65,8,0	0/0:12,0:12:32.95:0,33,761
chr10	99334246	.	A	AAG	304.07	PASS	AB=0.864;AC=19;AF=0.396;AN=48;BaseQRankSum=7.607;DP=369;FS=19.348;HRun=0;HaplotypeScore=74.2601;InbreedingCoeff=0.3807;MQ=45.41;MQ0=15;MQRankSum=-5.040;QD=6.33;ReadPosRankSum=-1.825;VQSLOD=1.1734;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:80,0:80:99:0,197,3121	1/1:1,0:1:2.84:14,3,0	0/0:46,0:13:23.38:0,23,420	0/0:49,0:16:36.11:0,36,512	1/1:4,0:4:3.01:36,3,0	0/1:3,0:3:8.04:8,0,42	1/1:4,1:5:11.97:95,12,0	0/0:45,0:43:99:0,117,1866	0/0:4,0:4:2.60:0,3,10	0/1:3,1:4:3.43:57,0,3	1/1:1,1:2:2.37:8,2,0	1/1:5,1:6:7.29:50,7,0	0/0:1,0:1:0:0,0,0	./.	0/0:2,0:2:5.81:0,6,47	0/1:7,0:7:26.80:73,0,27	0/1:7,2:10:0.12:31,0,0	0/0:19,0:18:54.18:0,54,838	0/0:6,0:2:3:0,3,26	1/1:2,0:2:5.61:56,6,0	./.	./.	1/1:1,0:1:2.04:6,2,0	0/0:3,0:3:6:0,6,53	./.	0/0:47,0:45:99:0,132,2126	0/1:2,1:3:13.41:19,0,13	0/0:10,0:10:30.10:0,30,483
chr10	99334268	.	A	ATG	111.20	PASS	AB=0.750;AC=10;AF=0.263;AN=38;BaseQRankSum=4.604;DP=320;FS=0.000;HRun=0;HaplotypeScore=76.1419;InbreedingCoeff=0.4391;MQ=51.83;MQ0=15;MQRankSum=-2.977;QD=5.85;ReadPosRankSum=-0.863;VQSLOD=2.4473;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:78,0:78:99:0,183,3019	./.	0/0:57,0:17:45.15:0,45,705	0/0:50,0:20:39.64:0,40,682	./.	0/0:2,0:2:1.67:0,2,28	1/1:2,1:3:3.01:60,3,0	0/0:40,0:39:99:0,108,1732	./.	1/1:1,1:2:2.84:61,3,0	0/1:0,1:1:0:0,0,0	0/1:2,1:3:0:0,0,0	0/0:1,0:1:0:0,0,0	./.	0/0:2,0:2:6.02:0,6,90	./.	1/1:4,2:6:4.01:38,4,0	0/0:19,0:19:57.12:0,57,852	./.	./.	./.	0/0:3,0:3:0:0,0,0	0/1:1,0:1:0:0,0,0	0/0:2,0:2:2.97:0,3,20	./.	0/0:34,0:32:96.31:0,96,1536	0/1:2,1:3:39.50:54,0,39	0/0:5,0:5:15.05:0,15,245
chr10	99334377	.	G	GACACAC	6095.71	PASS	AB=0.609;AC=40;AF=0.714;AN=56;BaseQRankSum=2.675;DP=655;FS=6.860;HRun=0;HaplotypeScore=158.9826;InbreedingCoeff=0.6903;MQ=44.90;MQ0=34;MQRankSum=-4.986;QD=15.24;ReadPosRankSum=1.500;VQSLOD=3.5555;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:46,0:43:17.43:310,17,0	1/1:0,5:7:9.03:299,9,0	0/0:56,0:12:23.22:0,23,374	0/0:60,0:12:13.87:0,14,214	0/0:1,13:15:0.94:0,1,1	1/1:2,12:19:8.90:298,9,0	1/1:4,10:18:14.32:435,14,0	0/0:51,0:50:89.52:0,90,1367	1/1:2,9:13:12.04:337,12,0	1/1:2,10:17:38.92:854,39,0	1/1:4,3:7:1.87:97,2,0	0/1:1,11:15:6.38:164,0,6	1/1:1,11:14:14.94:414,15,0	1/1:2,9:13:5.87:198,6,0	1/1:1,14:15:12.04:398,12,0	1/1:0,10:11:5.74:138,6,0	1/1:3,5:6:21.07:574,21,0	0/0:24,0:24:54.16:0,54,1104	1/1:13,1:16:19.36:446,19,0	1/1:4,13:20:3:100,3,0	1/1:18,31:57:9.86:89,10,0	1/1:1,12:16:2.84:54,3,0	1/1:10,4:16:15:287,15,0	1/1:1,35:41:12.04:276,12,0	1/1:0,9:11:15.05:327,15,0	0/0:37,0:37:87.25:0,87,1633	0/1:4,2:7:0:0,0,0	0/0:10,0:10:24.06:0,24,467
chr10	99334395	.	C	CACA	2308.13	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=5.041;DP=722;FS=14.401;HRun=0;HaplotypeScore=189.8476;InbreedingCoeff=-0.3698;MQ=47.39;MQ0=15;MQRankSum=-5.442;QD=6.27;ReadPosRankSum=7.619;VQSLOD=1.1421;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,33:39:58.79:1292,59,0	0/1:7,0:7:24.81:66,0,25	0/0:57,0:16:42.04:0,42,563	0/0:63,0:22:42.83:0,43,487	0/0:18,0:18:20.28:0,20,168	0/1:21,0:21:56.85:57,0,97	0/1:20,0:20:99:109,0,120	0/0:47,0:45:99:0,132,1902	0/1:15,0:15:79.34:79,0,123	0/1:23,0:23:85.74:86,0,306	0/1:14,0:13:16.09:16,0,163	0/1:18,0:18:48.68:49,0,156	0/1:17,0:17:74.94:75,0,147	0/1:14,0:14:38.25:38,0,64	0/1:16,0:16:70.35:79,0,70	0/1:15,0:15:25.02:25,0,159	0/1:12,0:10:95.20:126,0,95	0/0:26,0:26:75.22:0,75,1178	0/1:18,0:18:99:161,0,183	0/1:22,0:21:12.16:12,0,14	0/0:60,0:56:2.80:0,3,84	0/0:20,0:20:15.12:0,15,158	0/1:22,0:22:49.38:49,0,169	0/1:54,0:50:78.09:78,0,121	0/1:16,0:15:74.52:75,0,127	0/0:39,0:39:99:0,111,1772	0/0:9,0:9:7.67:0,8,49	0/0:13,0:13:33.11:0,33,533
chr10	99334427	.	G	GACACAC	1607.86	PASS	AB=0.810;AC=10;AF=0.179;AN=56;BaseQRankSum=2.787;DP=726;FS=14.555;HRun=0;HaplotypeScore=219.8277;InbreedingCoeff=0.7187;MQ=51.66;MQ0=15;MQRankSum=-4.846;QD=11.57;ReadPosRankSum=-2.501;VQSLOD=1.0083;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:35:54.01:0,54,858	0/0:8,0:8:18.06:0,18,271	0/0:36,0:13:27.20:0,27,516	0/0:60,0:24:19.70:0,20,374	0/0:27,0:27:51.13:0,51,677	0/0:23,0:23:30.55:0,31,438	0/0:21,0:21:42.12:0,42,579	0/0:33,0:31:57.09:0,57,882	0/0:22,0:22:6.66:0,7,438	0/1:36,0:36:9.40:9,0,817	0/0:23,0:23:43.42:0,43,669	0/0:18,0:18:29.10:0,29,368	0/0:17,0:17:24.12:0,24,542	0/0:17,0:17:33.11:0,33,482	0/0:15,0:15:21.07:0,21,294	0/0:20,0:20:34.68:0,35,498	0/1:5,2:12:29.09:236,0,29	0/0:25,0:25:49.41:0,49,1186	1/1:7,2:10:21.88:380,22,0	1/1:22,4:27:29.86:542,30,0	1/1:39,0:41:14.06:165,14,0	0/0:28,0:28:47.97:0,48,579	0/0:25,0:25:7.45:0,7,578	0/0:50,0:46:37.69:0,38,558	0/0:18,0:17:27.22:0,27,397	0/0:40,0:40:96.28:0,96,1963	1/1:3,6:10:15.05:441,15,0	0/0:18,0:19:49.69:0,50,973
chr10	99334439	.	CAG	C	2149.86	PASS	AB=0.932;AC=23;AF=0.411;AN=56;BaseQRankSum=-3.770;DP=758;FS=0.792;HRun=0;HaplotypeScore=170.3695;InbreedingCoeff=-0.2897;MQ=54.59;MQ0=13;MQRankSum=-0.768;QD=4.53;ReadPosRankSum=-9.355;VQSLOD=0.0158;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:31:26.78:0,27,953	0/1:9,1:9:70.62:71,0,105	0/0:49,0:21:33.48:0,33,620	0/0:53,0:25:33.69:0,34,535	0/1:28,1:29:9.39:9,0,316	0/1:24,1:25:12.74:13,0,209	0/1:20,4:23:99:222,0,187	0/0:37,0:37:99:0,107,1419	0/1:24,2:27:99:150,0,184	0/1:42,1:43:99:293,0,302	0/1:20,3:23:99:146,0,302	0/1:15,3:18:99:129,0,130	0/1:17,1:18:56.85:57,0,247	0/1:16,1:17:52.27:52,0,178	0/1:12,2:14:70.53:71,0,95	0/1:20,2:22:97.23:97,0,180	0/1:16,0:14:20.89:55,0,21	0/0:26,0:26:71.79:0,72,1155	1/1:13,0:12:1.33:81,1,0	1/1:25,0:25:14.78:179,15,0	1/1:34,0:34:14.76:139,15,0	0/1:33,0:33:81.38:81,0,304	0/1:28,4:32:99:404,0,182	0/1:38,2:39:30.02:30,0,265	0/0:18,0:17:20.52:0,21,218	0/0:42,0:41:99:0,107,1881	0/1:12,0:12:20.87:42,0,21	0/0:22,0:22:51.60:0,52,972
chr10	99334523	.	A	AT	1860.45	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.430;DP=584;FS=3.094;HRun=8;HaplotypeScore=71.0855;InbreedingCoeff=0.9986;MQ=74.60;MQ0=0;MQRankSum=2.465;QD=25.84;ReadPosRankSum=-2.600;VQSLOD=3.5021;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:79.28:0,79,716	0/0:9,0:9:24.01:0,24,220	0/0:20,0:20:33.26:0,33,284	0/0:19,0:18:31.94:0,32,293	0/0:32,0:32:87.04:0,87,796	0/0:22,0:22:60.02:0,60,549	0/0:17,0:17:39.01:0,39,357	1/1:4,25:28:72.18:809,72,0	0/0:22,0:22:60.02:0,60,542	0/0:22,0:22:54:0,54,489	0/0:15,0:15:35.92:0,36,317	0/0:17,0:17:48.02:0,48,436	0/0:14,0:14:36:0,36,323	0/0:16,0:15:42.02:0,42,384	0/0:15,0:15:45.02:0,45,411	0/0:16,0:16:42:0,42,378	0/0:18,0:18:48.03:0,48,439	0/0:15,0:15:39.01:0,39,357	0/0:26,0:26:69.03:0,69,631	0/0:34,0:34:87.04:0,87,796	0/0:21,0:21:54.03:0,54,494	0/0:25,0:25:62.95:0,63,566	0/0:25,0:25:54.02:0,54,494	0/0:26,0:26:77.98:0,78,700	0/0:13,0:13:36.02:0,36,329	1/1:5,26:31:53.73:848,54,0	0/0:23,0:23:63:0,63,569	1/1:2,10:12:30.09:346,30,0
chr10	99334987	.	GTTGTTTGT	G	2777.89	PASS	AB=0.972;AC=26;AF=0.481;AN=54;BaseQRankSum=-8.348;DP=290;FS=0.567;HRun=0;HaplotypeScore=98.7399;InbreedingCoeff=-0.2183;MQ=69.03;MQ0=5;MQRankSum=2.807;QD=12.18;ReadPosRankSum=0.378;VQSLOD=2.2162;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:99:200,0,296	1/1:3,0:3:5.04:97,5,0	0/0:13,0:10:24.05:0,24,390	0/0:11,0:9:17.20:0,17,186	0/1:12,0:12:34.11:34,0,221	0/1:9,0:9:99:196,0,103	0/1:5,0:5:44.66:74,0,45	0/1:32,0:28:99:452,0,366	0/1:4,0:4:61.92:62,0,72	1/1:4,9:13:24.51:337,25,0	0/0:6,0:6:9.03:0,9,199	1/1:4,0:4:9.03:134,9,0	0/0:5,0:5:14.08:0,14,251	0/1:8,0:8:66.07:188,0,66	0/0:4,0:4:6.02:0,6,140	0/1:5,0:5:11.96:12,0,209	0/1:22,0:22:99:234,0,254	0/0:17,0:19:54.05:0,54,1306	0/1:18,0:18:99:213,0,291	0/1:7,0:7:56.52:98,0,57	./.	1/1:6,0:6:12.03:175,12,0	0/1:1,4:5:0.16:0,0,0	1/1:1,0:1:3.01:48,3,0	0/1:12,0:12:99:133,0,323	0/1:12,0:12:89.59:90,0,303	0/1:18,0:18:61.36:61,0,400	0/1:18,0:18:99:106,0,421
chr10	99334990	.	G	GTTTA	1867.18	PASS	AB=1.000;AC=19;AF=0.352;AN=54;BaseQRankSum=4.326;DP=278;FS=0.627;HRun=0;HaplotypeScore=79.4328;InbreedingCoeff=0.1132;MQ=65.89;MQ0=6;MQRankSum=-8.113;QD=10.04;ReadPosRankSum=-1.926;VQSLOD=2.4984;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,4:14:15.43:277,15,0	0/0:3,0:3:9.01:0,9,121	0/0:12,0:9:27.07:0,27,360	0/0:11,0:9:22.96:0,23,186	0/0:8,0:8:24.05:0,24,364	0/1:9,0:9:17.43:17,0,237	0/0:5,0:5:12.03:0,12,160	1/1:33,0:28:21.98:200,22,0	0/0:4,0:4:7.57:0,8,105	0/0:13,0:13:33.05:0,33,420	0/1:5,0:5:14.72:63,0,15	0/0:4,0:4:9.03:0,9,132	0/1:5,0:5:57.62:90,0,58	0/1:8,0:8:16.04:16,0,230	0/1:3,0:3:14.97:64,0,15	0/0:5,0:5:12.02:0,12,184	0/1:21,0:21:32.02:32,0,427	0/0:18,0:18:48.47:0,48,688	0/1:18,0:17:87.62:88,0,355	0/1:7,0:7:22.44:22,0,93	./.	0/0:6,0:6:15:0,15,170	0/1:5,0:5:0:0,0,0	0/0:1,0:1:3.01:0,3,47	0/1:12,0:12:99:110,0,230	1/1:8,3:11:21.80:301,22,0	0/1:17,0:17:99:167,0,159	1/1:13,5:18:41.20:594,41,0
chr10	99334994	.	G	GTTTA	3464.27	PASS	AB=1.000;AC=38;AF=0.731;AN=52;BaseQRankSum=0.747;DP=263;FS=2.502;HRun=0;HaplotypeScore=71.8609;InbreedingCoeff=0.5773;MQ=64.04;MQ0=6;MQRankSum=-5.756;QD=17.07;ReadPosRankSum=0.057;VQSLOD=3.3343;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:18.04:346,18,0	1/1:3,0:3:2.98:24,3,0	0/0:13,0:10:24.04:0,24,311	0/0:10,0:8:20.58:0,21,171	0/0:9,0:9:15.93:0,16,137	1/1:6,2:8:9.94:138,10,0	0/0:4,0:4:0.47:0,0,1	1/1:33,0:28:8.19:110,8,0	1/1:4,0:4:6.48:78,6,0	1/1:12,0:12:7.04:68,7,0	1/1:1,7:8:9.03:177,9,0	0/0:3,0:3:0.89:0,1,2	1/1:3,2:5:1.03:196,1,0	1/1:6,1:7:6.46:98,6,0	1/1:2,2:4:6.02:143,6,0	0/1:4,0:4:14.09:14,0,57	1/1:10,9:19:12.70:172,13,0	0/0:19,0:19:53.92:0,54,721	1/1:10,4:14:12.44:321,12,0	1/1:3,1:4:6:95,6,0	./.	1/1:4,0:4:5.98:50,6,0	0/1:4,0:4:0:1,0,0	./.	1/1:9,4:13:20.90:346,21,0	1/1:10,0:10:17.31:258,17,0	1/1:6,11:18:16.10:411,16,0	1/1:15,0:15:19.42:419,19,0
chr10	99335173	.	ACTTTGGC	A	14920.87	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.211;DP=327;FS=4.086;HRun=0;HaplotypeScore=91.4311;InbreedingCoeff=0.8405;MQ=91.65;MQ0=0;MQRankSum=-9.915;QD=53.67;ReadPosRankSum=5.206;VQSLOD=4.1359;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,31:36:60.07:1551,60,0	1/1:1,3:4:3.01:78,3,0	0/0:18,0:18:51.17:0,51,1689	0/0:20,0:20:45.12:0,45,1147	1/1:1,8:9:9.03:233,9,0	1/1:0,8:8:21.07:539,21,0	1/1:0,10:10:24.08:623,24,0	1/1:4,25:29:75.16:1749,75,0	1/1:2,11:13:33.11:856,33,0	1/1:3,8:11:27.06:593,27,0	1/1:0,7:7:9.03:233,9,0	1/1:2,5:7:18.06:467,18,0	1/1:1,8:9:18.06:467,18,0	1/1:0,9:9:27.09:700,27,0	1/1:0,14:14:39.13:1012,39,0	1/1:1,8:9:18.06:466,18,0	1/1:1,10:11:27.09:700,27,0	0/0:11,0:11:33.11:0,33,1248	1/1:3,16:19:48.15:1109,48,0	1/1:1,5:6:15.05:389,15,0	1/1:0,15:15:15.05:389,15,0	1/1:1,4:5:9.03:233,9,0	1/1:0,7:7:11.30:310,11,0	1/1:0,6:6:18.06:467,18,0	1/1:1,5:6:12.04:311,12,0	1/1:2,8:10:18.06:436,18,0	1/1:0,8:8:18.06:467,18,0	1/1:2,8:10:21.07:542,21,0
chr10	99336276	.	C	CG	573.49	PASS	AB=0.960;AC=7;AF=0.125;AN=56;BaseQRankSum=-4.702;DP=517;FS=20.989;HRun=4;HaplotypeScore=54.5489;InbreedingCoeff=0.7590;MQ=47.51;MQ0=23;MQRankSum=-4.417;QD=11.24;ReadPosRankSum=-1.475;VQSLOD=0.3123;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:63.18:0,63,714	0/0:12,0:12:27.07:0,27,298	0/1:23,1:8:20.03:20,0,169	0/0:25,0:4:9.03:0,9,102	0/0:16,0:15:27.08:0,27,306	0/0:21,0:18:30.08:0,30,338	0/0:30,0:26:57.16:0,57,646	1/1:6,10:13:30.06:386,30,0	0/0:22,0:20:45.11:0,45,499	0/0:17,0:17:42.12:0,42,476	0/0:13,0:13:18.04:0,18,203	0/0:14,0:10:21.06:0,21,236	0/0:21,0:18:39.11:0,39,441	0/0:20,0:17:8.49:0,8,314	0/0:15,0:11:24.06:0,24,265	0/0:16,0:16:42.11:0,42,468	0/0:28,0:25:30.08:0,30,338	0/0:23,0:21:42.12:0,42,474	0/0:18,0:11:30.09:0,30,340	0/0:23,0:22:60.17:0,60,680	0/0:14,0:13:30.09:0,30,340	0/0:14,0:14:27.07:0,27,306	0/0:19,0:19:33.09:0,33,374	0/0:16,0:16:27.08:0,27,306	0/0:13,0:13:24.03:0,24,258	1/1:1,7:8:18.03:226,18,0	0/0:25,0:25:54.15:0,54,611	1/1:1,2:3:6.02:82,6,0
chr10	99336675	.	TGA	T	17483.24	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=11.358;DP=643;FS=7.322;HRun=0;HaplotypeScore=75.3366;InbreedingCoeff=0.9937;MQ=57.32;MQ0=11;MQRankSum=5.697;QD=36.42;ReadPosRankSum=5.313;VQSLOD=7.1263;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:96.32:1374,96,0	1/1:1,4:5:12.04:171,12,0	0/0:28,0:13:36.08:0,36,596	0/0:33,0:21:51.17:0,51,919	1/1:2,24:26:69.23:977,69,0	1/1:0,25:25:63.21:903,63,0	1/1:0,21:21:51.17:730,51,0	0/0:33,0:33:99:0,99,1756	1/1:1,17:16:42.14:601,42,0	1/1:2,24:26:69.22:968,69,0	1/1:0,18:17:45.08:613,45,0	1/1:1,13:14:36.12:516,36,0	1/1:1,18:19:48.16:688,48,0	1/1:0,17:17:42.14:601,42,0	1/1:1,20:20:45.15:645,45,0	1/1:1,14:15:39.13:558,39,0	1/1:0,34:34:90.30:1289,90,0	0/0:19,0:19:51.17:0,51,917	1/1:0,15:15:45.14:629,45,0	1/1:1,26:27:72.19:1001,72,0	1/1:2,25:27:66.22:936,66,0	1/1:3,21:23:63.21:891,63,0	1/1:1,26:27:69.23:988,69,0	1/1:1,19:20:51.17:730,51,0	1/1:0,24:24:60.20:859,60,0	0/0:35,0:35:99:0,99,1808	1/1:0,20:19:57.19:816,57,0	0/0:15,0:14:42.14:0,42,770
chr10	99337378	.	G	GCC	413.91	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.142;DP=554;FS=2.737;HRun=0;HaplotypeScore=84.9254;InbreedingCoeff=0.9865;MQ=62.51;MQ0=2;MQRankSum=-0.322;QD=31.84;ReadPosRankSum=1.838;VQSLOD=5.8566;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:99:0,108,1687	0/0:12,0:12:36.11:0,36,555	0/0:22,0:18:46.95:0,47,690	0/0:20,0:20:49.08:0,49,730	0/0:23,0:23:66.20:0,66,1028	0/0:11,0:11:33.11:0,33,536	0/0:27,0:27:81.23:0,81,1287	0/0:21,0:21:63.22:0,63,1028	0/0:22,0:22:66.23:0,66,1076	0/0:17,0:17:48.16:0,48,783	0/0:17,0:17:51.16:0,51,808	0/0:16,0:16:48.15:0,48,754	0/0:12,0:12:33.11:0,33,538	0/0:15,0:15:45.15:0,45,732	0/0:20,0:19:57.19:0,57,930	1/1:0,12:13:30.10:508,30,0	0/0:22,0:22:66.23:0,66,1076	0/0:26,0:26:78.20:0,78,1210	0/0:8,0:7:21.07:0,21,331	0/0:18,0:17:51.17:0,51,832	0/0:51,0:51:99:0,154,2471	0/0:11,0:11:33.11:0,33,536	0/0:13,0:13:39.13:0,39,619	0/0:39,0:39:99:0,114,1859	0/0:12,0:12:36.12:0,36,587	0/0:20,0:20:60.20:0,60,954	0/0:23,0:23:69.24:0,69,1126	0/0:6,0:6:18.05:0,18,270
chr10	99338362	.	GC	G	14818.19	PASS	AB=1.000;AC=52;AF=0.929;AN=56;BaseQRankSum=5.111;DP=516;FS=1.550;HRun=1;HaplotypeScore=148.4892;InbreedingCoeff=0.3951;MQ=57.39;MQ0=11;MQRankSum=-5.212;QD=30.06;ReadPosRankSum=0.846;VQSLOD=4.6436;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:32:69.10:891,69,0	1/1:0,11:10:24.08:335,24,0	0/1:12,0:10:22.64:23,0,101	0/1:12,0:7:19.93:20,0,43	1/1:0,9:9:3:42,3,0	1/1:1,14:14:39.13:543,39,0	1/1:0,27:27:72.11:935,72,0	1/1:0,21:20:57.16:754,57,0	1/1:0,25:25:60.20:827,60,0	1/1:1,21:22:66.22:889,66,0	1/1:0,12:12:24.05:322,24,0	1/1:1,17:16:39.07:519,39,0	1/1:1,13:14:39.11:526,39,0	1/1:0,24:24:69.23:966,69,0	1/1:1,17:16:48.12:648,48,0	1/1:0,15:14:42.06:536,42,0	1/1:0,26:25:63.14:824,63,0	0/0:23,0:23:66.17:0,66,979	1/1:1,17:16:48.16:659,48,0	1/1:0,16:16:42.10:562,42,0	1/1:0,39:39:45.20:511,45,0	1/1:1,14:13:24.08:330,24,0	1/1:1,11:11:21.07:291,21,0	1/1:0,20:19:44.98:541,45,0	1/1:1,13:14:39.13:537,39,0	1/1:0,26:25:72.24:996,72,0	1/1:0,17:17:51.17:709,51,0	1/1:0,2:2:6.02:81,6,0
chr10	99338376	.	GCACACA	G	14817.95	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=5.797;DP=497;FS=2.639;HRun=0;HaplotypeScore=190.8224;InbreedingCoeff=0.8615;MQ=45.55;MQ0=4;MQRankSum=-4.912;QD=33.37;ReadPosRankSum=2.436;VQSLOD=4.7824;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,21:32:36.59:757,37,0	1/1:3,6:9:12.02:190,12,0	0/0:16,0:9:20.08:0,20,404	0/0:17,0:6:9.03:0,9,272	1/1:3,7:10:9.34:195,9,0	1/1:4,9:13:30.10:621,30,0	1/1:9,21:30:57.17:1084,57,0	1/1:13,9:20:39.11:738,39,0	1/1:2,15:17:48.16:995,48,0	1/1:9,11:20:48.16:997,48,0	1/1:4,11:16:11.15:259,11,0	1/1:5,7:13:24.08:482,24,0	1/1:3,13:16:27.09:574,27,0	1/1:6,23:29:59.75:1247,60,0	1/1:4,16:20:39.13:771,39,0	1/1:3,5:8:12.04:260,12,0	1/1:11,13:24:33.58:657,34,0	0/0:16,0:18:51.17:0,51,1512	1/1:5,9:15:35.47:662,35,0	1/1:6,10:16:33.11:716,33,0	1/1:22,14:34:9.24:196,9,0	1/1:3,9:11:12.04:250,12,0	1/1:3,5:8:18.06:390,18,0	1/1:11,8:19:18.06:367,18,0	1/1:2,17:19:27.09:570,27,0	1/1:10,13:22:54.18:1115,54,0	1/1:6,9:15:36.12:724,36,0	0/0:1,0:2:3.01:0,3,43
chr10	99338629	.	C	CT	19018.83	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=9.927;DP=514;FS=3.469;HRun=0;HaplotypeScore=158.4968;InbreedingCoeff=0.9957;MQ=73.56;MQ0=1;MQRankSum=-7.131;QD=41.35;ReadPosRankSum=2.677;VQSLOD=4.1994;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:60.18:928,60,0	1/1:0,9:9:21.07:335,21,0	0/0:15,0:15:42.08:0,42,529	0/0:18,0:17:48.15:0,48,635	1/1:1,25:26:54.18:857,54,0	1/1:6,15:21:57.16:844,57,0	1/1:1,11:12:33.11:526,33,0	1/1:4,7:11:24.04:354,24,0	1/1:2,20:22:57.19:905,57,0	1/1:2,22:22:69.20:1075,69,0	1/1:1,17:18:54.17:834,54,0	1/1:4,12:16:42.03:611,42,0	1/1:1,18:19:57.19:904,57,0	1/1:0,19:19:54.13:824,54,0	1/1:1,17:18:51.17:802,51,0	1/1:2,16:18:54.18:849,54,0	1/1:0,25:25:75.26:1193,75,0	0/0:21,0:21:21.27:0,21,797	1/1:1,8:9:27.06:404,27,0	1/1:4,15:19:48.15:739,48,0	1/1:1,23:24:60.20:944,60,0	1/1:0,18:18:36.12:572,36,0	1/1:2,15:17:39.13:613,39,0	1/1:1,18:19:54.18:860,54,0	1/1:1,17:17:42.14:666,42,0	1/1:1,20:21:63.17:948,63,0	1/1:2,20:22:63.15:951,63,0	1/1:0,11:11:30.10:479,30,0
chr10	99338695	.	A	ATT	18752.70	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-3.893;DP=595;FS=7.221;HRun=8;HaplotypeScore=116.4377;InbreedingCoeff=0.9379;MQ=65.08;MQ0=11;MQRankSum=-2.746;QD=36.27;ReadPosRankSum=5.108;VQSLOD=3.8662;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:34:93.27:1439,93,0	1/1:0,3:4:9.03:143,9,0	0/0:27,0:18:38.94:0,39,385	0/0:26,0:24:42.45:0,42,403	1/1:5,12:17:36.08:544,36,0	1/1:1,20:21:57.16:878,57,0	1/1:3,23:27:62.70:961,63,0	1/1:7,16:23:51.10:708,51,0	1/1:2,17:19:48.16:761,48,0	1/1:8,16:23:54.17:818,54,0	1/1:2,11:13:30.06:448,30,0	1/1:2,19:21:60.14:901,60,0	1/1:2,19:21:57.19:904,57,0	1/1:4,17:20:45.15:714,45,0	1/1:6,14:20:45.15:711,45,0	1/1:2,19:21:54.15:830,54,0	1/1:12,21:34:72.18:1069,72,0	0/0:18,0:18:41.94:0,42,456	1/1:7,11:16:5.13:465,5,0	1/1:4,17:20:54.18:853,54,0	1/1:4,17:20:54.08:769,54,0	1/1:6,8:15:30.48:403,30,0	1/1:2,18:21:54.66:857,55,0	1/1:4,24:26:63.21:1000,63,0	1/1:5,12:16:37.33:547,37,0	1/1:6,12:20:48.09:685,48,0	1/1:6,17:22:33.52:786,34,0	1/1:0,12:12:36.12:560,36,0
chr10	99339726	.	CATATATATATATATATATATATATATATAT	C	8580.12	PASS	AB=1.000;AC=35;AF=0.761;AN=46;BaseQRankSum=5.256;DP=205;FS=17.802;HRun=0;HaplotypeScore=153.2368;InbreedingCoeff=0.4326;MQ=57.55;MQ0=1;MQRankSum=-3.321;QD=59.58;ReadPosRankSum=3.232;VQSLOD=3.1223;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:14.37:31,0,14	1/1:2,2:4:6.02:463,6,0	./.	./.	1/1:7,0:8:6.02:255,6,0	1/1:9,4:13:3.01:232,3,0	1/1:3,1:4:3.01:232,3,0	0/0:18,0:18:18.06:0,18,950	1/1:4,1:7:9.03:651,9,0	1/1:4,4:8:9.03:353,9,0	1/1:3,2:7:12.04:842,12,0	1/1:6,5:11:6.02:463,6,0	1/1:3,3:6:5.93:463,6,0	1/1:1,2:4:9.03:673,9,0	./.	1/1:2,3:6:12.04:905,12,0	1/1:6,2:9:9.03:673,9,0	0/0:5,0:4:1.35:0,1,399	1/1:11,3:14:9.02:491,9,0	1/1:0,3:3:6.02:463,6,0	0/0:4,0:4:0:0,0,0	1/1:0,1:1:3.01:232,3,0	1/1:5,4:9:5.87:463,6,0	./.	./.	0/0:3,0:2:3.01:0,3,100	1/1:4,6:10:9.03:695,9,0	0/0:5,0:7:18.02:0,18,1573
chr10	99339930	.	A	ATATTATTATTATTAT	6414.97	PASS	AB=1.000;AC=44;AF=0.815;AN=54;BaseQRankSum=-4.276;DP=223;FS=11.203;HRun=0;HaplotypeScore=96.7454;InbreedingCoeff=0.4207;MQ=61.30;MQ0=4;MQRankSum=-5.813;QD=37.30;ReadPosRankSum=-1.911;VQSLOD=2.9041;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:10:6.02:88,6,0	1/1:3,2:5:9.03:533,9,0	0/0:8,0:7:0.71:0,1,37	0/1:18,0:6:0.86:1,0,15	1/1:8,0:7:9.03:374,9,0	1/1:6,7:13:9.03:549,9,0	1/1:4,0:4:6:144,6,0	0/0:14,0:14:15.52:0,16,361	1/1:5,0:5:6.02:259,6,0	1/1:7,0:7:3:28,3,0	1/1:4,0:4:6.02:283,6,0	1/1:4,0:3:3.01:41,3,0	1/1:0,2:2:3.01:175,3,0	1/1:5,0:5:12.01:386,12,0	1/1:7,0:7:15:471,15,0	1/1:3,2:5:3.01:208,3,0	1/1:3,4:8:13.60:650,14,0	0/1:14,0:15:72.69:73,0,1027	1/1:11,0:11:12.04:426,12,0	1/1:5,0:5:6.01:125,6,0	1/1:5,0:5:6:120,6,0	./.	1/1:5,0:5:3.01:69,3,0	1/1:5,0:5:3.01:134,3,0	1/1:6,0:11:9.03:556,9,0	0/0:13,0:13:36.58:0,37,1316	1/1:10,0:10:12.04:724,12,0	0/0:14,0:14:15.05:0,15,554
chr10	99341582	.	A	AT	608.59	PASS	AB=0.533;AC=5;AF=0.096;AN=52;BaseQRankSum=0.780;DP=681;FS=21.707;HRun=2;HaplotypeScore=65.7181;InbreedingCoeff=0.7748;MQ=51.97;MQ0=20;MQRankSum=-5.042;QD=20.99;ReadPosRankSum=-0.405;VQSLOD=2.1794;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:99:0,99,1207	0/0:11,0:11:33.09:0,33,392	./.	./.	0/0:31,0:31:81.14:0,81,944	0/0:23,0:23:63.16:0,63,753	0/0:22,0:21:51.16:0,51,628	1/1:2,14:8:21.07:297,21,0	0/0:26,0:26:75.21:0,75,906	0/0:44,0:41:99:0,114,1381	0/0:23,0:22:56.39:0,56,672	0/0:18,0:17:42.12:0,42,507	0/0:26,0:26:72.18:0,72,873	0/0:26,0:26:51.15:0,51,620	0/0:27,0:27:72.23:0,72,890	0/0:16,0:15:39.12:0,39,483	0/0:39,0:37:99:0,99,1227	0/0:30,0:29:87.18:0,87,1032	0/0:28,0:18:54.17:0,54,669	0/0:38,0:38:99:0,99,1192	0/0:30,0:28:78.23:0,78,953	0/0:21,0:21:45.14:0,45,557	0/0:30,0:30:84.25:0,84,1025	0/0:17,0:17:39.11:0,39,472	0/0:30,0:30:78.22:0,78,942	0/1:1,7:7:16.14:221,0,16	0/0:41,0:41:99:0,117,1447	1/1:0,5:5:15.05:216,15,0
chr10	99342126	.	CT	C	4933.28	PASS	AB=0.794;AC=43;AF=0.768;AN=56;BaseQRankSum=4.622;DP=544;FS=2.280;HRun=12;HaplotypeScore=68.6892;InbreedingCoeff=0.4604;MQ=56.92;MQ0=8;MQRankSum=2.769;QD=10.59;ReadPosRankSum=3.054;VQSLOD=4.5570;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,1:15:2.27:0,2,186	1/1:1,8:11:29.54:202,30,0	0/1:20,2:11:23.56:24,0,74	0/0:12,0:9:14.72:0,15,111	1/1:14,22:36:23.22:364,23,0	1/1:3,15:19:6.48:125,6,0	0/1:6,11:18:0.54:177,0,1	0/1:26,3:25:15.61:16,0,386	1/1:1,22:23:38.70:301,39,0	1/1:5,20:23:50.78:394,51,0	1/1:7,15:22:38.81:302,39,0	1/1:3,13:16:20.91:163,21,0	1/1:2,11:13:20.89:162,21,0	1/1:0,11:10:23.85:180,24,0	1/1:2,10:12:14.94:116,15,0	1/1:1,13:15:25.90:186,26,0	1/1:3,18:20:5.43:225,5,0	0/1:13,2:16:7.56:8,0,280	0/1:7,9:13:3.70:157,0,4	1/1:7,21:30:52.72:400,53,0	1/1:4,7:11:20.91:163,21,0	1/1:2,14:16:35.83:279,36,0	1/1:5,15:19:27.22:209,27,0	1/1:4,5:9:14.93:116,15,0	1/1:7,14:21:8.36:248,8,0	0/0:34,0:30:27.98:0,28,428	1/1:7,24:31:53.73:418,54,0	0/0:13,1:12:7.71:0,8,252
chr10	99342327	.	A	AG	468.68	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=7.410;DP=603;FS=0.000;HRun=1;HaplotypeScore=59.2463;InbreedingCoeff=0.9305;MQ=46.52;MQ0=31;MQRankSum=-4.218;QD=10.42;ReadPosRankSum=-0.179;VQSLOD=1.0218;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:81.25:0,81,1036	0/0:9,0:9:21.07:0,21,273	./.	./.	0/0:24,0:21:33.11:0,33,428	0/0:18,0:17:45.15:0,45,584	0/0:23,0:22:48.10:0,48,589	1/1:4,8:1:3:27,3,0	0/0:28,0:28:69.05:0,69,881	0/0:34,0:29:72.23:0,72,935	0/0:22,0:19:45.15:0,45,584	0/0:19,0:19:42.14:0,42,544	0/0:18,0:17:51.17:0,51,662	0/0:22,0:21:57.19:0,57,739	0/0:11,0:11:27.09:0,27,349	0/0:21,0:21:54.17:0,54,687	0/0:29,0:27:57.16:0,57,721	0/0:32,0:25:54.15:0,54,682	0/0:19,0:11:24.08:0,24,312	0/0:32,0:29:57.19:0,57,740	0/0:39,0:33:66.21:0,66,857	0/0:24,0:24:42.14:0,42,545	0/0:17,0:17:36.12:0,36,467	0/0:27,0:26:39.13:0,39,504	0/0:18,0:14:33.11:0,33,428	1/1:3,19:13:30.01:293,30,0	0/0:28,0:27:66.19:0,66,840	1/1:0,11:10:27.05:279,27,0
chr10	99342329	.	ATC	A	494.30	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=7.080;DP=603;FS=2.066;HRun=0;HaplotypeScore=67.3396;InbreedingCoeff=0.9305;MQ=46.63;MQ0=34;MQRankSum=-3.323;QD=12.06;ReadPosRankSum=0.485;VQSLOD=3.1832;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:81.18:0,81,1560	0/0:9,0:9:21.07:0,21,426	./.	./.	0/0:23,0:20:33.11:0,33,670	0/0:19,0:18:48.16:0,48,961	0/0:23,0:22:51.13:0,51,990	1/1:3,8:1:3.01:31,3,0	0/0:29,0:29:75.26:0,75,1499	0/0:33,0:28:84.29:0,84,1663	0/0:23,0:20:48.16:0,48,963	0/0:19,0:19:45.15:0,45,902	0/0:19,0:18:54.19:0,54,1078	0/0:21,0:20:57.20:0,57,1157	0/0:11,0:11:30.10:0,30,597	0/0:22,0:22:57.20:0,57,1146	0/0:28,0:26:57.20:0,57,1134	0/0:32,0:25:54.18:0,54,1073	0/0:19,0:11:27.09:0,27,533	0/0:32,0:29:57.20:0,57,1157	0/0:39,0:33:69.24:0,69,1378	0/0:25,0:25:45.15:0,45,903	0/0:16,0:16:36.12:0,36,731	0/0:27,0:26:39.13:0,39,791	0/0:18,0:14:33.11:0,33,670	1/1:0,19:11:24.06:278,24,0	0/0:28,0:27:66.12:0,66,1329	1/1:0,11:10:27.08:315,27,0
chr10	99342615	.	A	AT	2151.97	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.560;DP=619;FS=5.617;HRun=4;HaplotypeScore=57.1470;InbreedingCoeff=0.9941;MQ=83.85;MQ0=0;MQRankSum=0.321;QD=30.31;ReadPosRankSum=-3.173;VQSLOD=2.4765;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:93.24:0,93,1043	0/0:5,0:5:15.04:0,15,170	0/0:21,0:21:53.30:0,53,620	0/0:19,0:19:39.07:0,39,415	0/0:25,0:25:69.19:0,69,773	0/0:24,0:24:72.13:0,72,775	0/0:24,0:24:63.16:0,63,703	1/1:7,27:34:84.23:1084,84,0	0/0:19,0:19:54.13:0,54,594	0/0:29,0:29:69.19:0,69,781	0/0:20,0:20:59.96:0,60,658	0/0:23,0:23:69.19:0,69,774	0/0:18,0:18:51.13:0,51,570	0/0:24,0:24:63.16:0,63,705	0/0:13,0:13:33.09:0,33,374	0/0:15,0:15:39.10:0,39,433	0/0:25,0:25:66.15:0,66,726	0/0:19,0:19:54.11:0,54,598	0/0:18,0:18:48.12:0,48,535	0/0:34,0:34:93.20:0,93,1016	0/0:31,0:31:81.17:0,81,893	0/0:25,0:25:72.21:0,72,816	0/0:16,0:16:45.12:0,45,498	0/0:29,0:29:87.25:0,87,987	0/0:13,0:13:36.09:0,36,398	1/1:1,19:20:57.17:760,57,0	0/0:22,0:22:63.16:0,63,703	1/1:3,14:17:33.11:451,33,0
chr10	99342844	.	AG	A	16017.68	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-1.373;DP=571;FS=0.000;HRun=3;HaplotypeScore=65.1799;InbreedingCoeff=0.8311;MQ=85.93;MQ0=0;MQRankSum=-7.182;QD=30.98;ReadPosRankSum=6.505;VQSLOD=4.1618;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,39:42:99:1362,111,0	1/1:1,9:10:27.08:335,27,0	0/0:18,0:18:50.96:0,51,639	0/0:18,0:18:25.29:0,25,602	1/1:1,15:16:42.13:520,42,0	1/1:2,16:18:51.15:618,51,0	1/1:1,14:15:30.09:372,30,0	1/1:21,0:21:16.42:148,16,0	1/1:1,18:19:57.18:699,57,0	1/1:1,20:21:60.15:717,60,0	1/1:0,7:7:21.07:260,21,0	1/1:0,25:25:66.17:801,66,0	1/1:0,22:22:60.19:744,60,0	1/1:1,24:25:72.23:887,72,0	1/1:1,24:25:75.22:917,75,0	1/1:1,15:16:45.14:558,45,0	1/1:0,21:21:57.18:706,57,0	0/0:18,0:18:54.18:0,54,777	1/1:2,15:17:45.14:558,45,0	1/1:2,23:25:53.21:820,53,0	1/1:3,29:32:78.23:950,78,0	1/1:0,24:24:72.18:875,72,0	1/1:1,17:18:51.16:629,51,0	1/1:0,18:18:51.16:632,51,0	1/1:0,18:18:54.17:669,54,0	0/1:21,0:21:31.28:107,0,31	1/1:0,31:31:84.25:1028,84,0	1/1:10,0:10:24.41:105,24,0
chr10	99342847	.	GT	G	6336.78	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.325;DP=578;FS=2.239;HRun=4;HaplotypeScore=101.6898;InbreedingCoeff=0.8743;MQ=86.89;MQ0=0;MQRankSum=-6.354;QD=12.14;ReadPosRankSum=7.463;VQSLOD=2.4164;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:42,2:44:36.64:408,37,0	1/1:9,0:9:24.11:103,24,0	0/0:19,0:19:48.12:0,48,641	0/0:19,0:19:47.03:0,47,637	1/1:18,0:18:23.24:158,23,0	1/1:19,1:20:0.48:190,0,0	1/1:15,0:15:6.15:96,6,0	1/1:1,21:22:63.13:707,63,0	1/1:18,1:19:51.57:250,52,0	1/1:21,0:21:18.66:143,19,0	1/1:7,0:7:18.37:78,18,0	1/1:25,0:25:55.91:253,56,0	1/1:23,0:23:28.93:194,29,0	1/1:25,0:25:64.80:306,65,0	1/1:25,0:25:64.65:288,65,0	1/1:15,0:15:40.43:186,40,0	1/1:21,0:21:51.61:229,52,0	0/0:18,0:18:54.18:0,54,748	1/1:16,0:16:15.02:131,15,0	1/1:25,0:25:37.20:245,37,0	1/1:30,2:32:49.84:336,50,0	1/1:25,0:25:37.80:249,38,0	1/1:18,1:19:24.27:205,24,0	1/1:19,0:19:25.21:186,25,0	1/1:18,0:18:47.40:195,47,0	1/1:2,16:18:48.13:562,48,0	1/1:32,0:32:53.69:315,54,0	1/1:0,9:9:27.08:324,27,0
chr10	99344806	.	CA	C	19996.04	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.014;DP=708;FS=4.950;HRun=4;HaplotypeScore=97.3005;InbreedingCoeff=0.9967;MQ=95.40;MQ0=0;MQRankSum=-10.738;QD=31.99;ReadPosRankSum=6.316;VQSLOD=4.5974;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:42:99:1367,114,0	1/1:0,11:11:30.09:360,30,0	0/0:38,0:38:89.80:0,90,1124	0/0:28,0:28:78.03:0,78,995	1/1:3,23:26:60.18:720,60,0	1/1:0,17:17:48.15:576,48,0	1/1:2,22:24:66.20:792,66,0	1/1:1,30:31:90.24:1045,90,0	1/1:0,26:26:69.21:828,69,0	1/1:0,22:22:66.19:780,66,0	1/1:2,15:17:45.14:540,45,0	1/1:0,22:22:63.19:756,63,0	1/1:0,22:22:63.19:756,63,0	1/1:0,21:21:60.18:720,60,0	1/1:4,23:27:66.20:792,66,0	1/1:2,17:19:54.16:639,54,0	1/1:0,31:31:75.23:900,75,0	0/0:17,0:17:51.17:0,51,713	1/1:0,28:28:84.20:979,84,0	1/1:3,20:23:51.15:611,51,0	1/1:4,78:82:99:2628,220,0	1/1:2,25:27:66.20:791,66,0	1/1:1,17:18:48.13:576,48,0	1/1:0,22:22:60.18:720,60,0	1/1:1,11:12:30.09:360,30,0	1/1:1,28:29:78.24:935,78,0	1/1:0,20:20:51.16:612,51,0	1/1:0,6:6:18.06:216,18,0
chr10	99345302	.	G	GCAGGAACTCAAA	54772.08	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.387;DP=570;FS=2.465;HRun=0;HaplotypeScore=221.4374;InbreedingCoeff=0.9948;MQ=62.58;MQ0=0;MQRankSum=-11.739;QD=109.33;ReadPosRankSum=0.926;VQSLOD=4.6420;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,15:32:42.10:1908,42,0	1/1:10,7:17:48.16:2568,48,0	0/0:23,0:23:51.07:0,51,1479	0/0:18,0:18:45.11:0,45,1058	1/1:11,11:22:54.14:1848,54,0	1/1:10,10:20:48.16:2463,48,0	1/1:15,10:25:60.11:2498,60,0	1/1:21,3:28:60.08:2191,60,0	1/1:13,10:25:54.19:3066,54,0	1/1:16,8:24:69.23:3493,69,0	1/1:11,9:21:63.17:2268,63,0	1/1:7,10:17:48.16:2529,48,0	1/1:7,7:14:36.12:1808,36,0	1/1:4,9:13:39.13:2093,39,0	1/1:8,9:17:45.15:2321,45,0	1/1:5,7:11:21.07:1278,21,0	1/1:12,5:21:48.16:2322,48,0	0/0:28,0:28:81.25:0,81,2641	1/1:8,3:12:27.02:1076,27,0	1/1:9,8:18:51.18:2588,51,0	1/1:18,7:27:39.13:1528,39,0	1/1:11,9:20:57.18:2350,57,0	1/1:13,11:24:57.20:2667,57,0	1/1:12,5:18:18.06:873,18,0	1/1:10,13:24:66.23:3135,66,0	1/1:12,10:25:63.13:2844,63,0	1/1:9,4:14:36.12:1788,36,0	1/1:5,4:10:27.09:1269,27,0
chr10	99345434	.	GCAGTCTGCCCC	G	22466.37	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=6.294;DP=305;FS=21.699;HRun=0;HaplotypeScore=129.7761;InbreedingCoeff=0.9013;MQ=54.79;MQ0=0;MQRankSum=-9.286;QD=86.74;ReadPosRankSum=3.888;VQSLOD=2.9292;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:30.10:1117,30,0	1/1:0,5:6:18.06:664,18,0	0/0:12,0:12:36.12:0,36,1689	0/0:14,0:11:33.11:0,33,1584	1/1:0,15:15:30.10:1117,30,0	1/1:0,8:8:24.08:894,24,0	1/1:0,9:8:21.07:782,21,0	1/1:0,10:8:24.04:802,24,0	1/1:0,11:11:27.09:1006,27,0	1/1:0,15:15:42.14:1565,42,0	1/1:0,15:15:36.12:1340,36,0	1/1:0,5:5:9.03:299,9,0	1/1:0,11:12:30.10:1104,30,0	1/1:0,9:9:21.07:782,21,0	1/1:0,7:7:18.06:671,18,0	1/1:0,10:10:18.06:670,18,0	1/1:0,5:5:6.02:224,6,0	0/0:20,0:20:60.21:0,60,3548	1/1:0,3:3:9.03:335,9,0	1/1:0,10:10:30.10:1117,30,0	1/1:0,18:18:20.59:781,21,0	1/1:0,10:10:30.10:1117,30,0	1/1:0,12:12:33.11:1228,33,0	1/1:0,12:14:27.09:1005,27,0	1/1:0,12:12:33.11:1229,33,0	1/1:1,12:13:27.09:942,27,0	1/1:0,11:11:33.11:1228,33,0	1/1:1,3:4:12.04:445,12,0
chr10	99345437	.	GTCTGCCCCT	G	9669.54	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=10.388;DP=309;FS=19.827;HRun=0;HaplotypeScore=165.8581;InbreedingCoeff=0.8985;MQ=54.76;MQ0=0;MQRankSum=-9.562;QD=37.48;ReadPosRankSum=4.627;VQSLOD=3.3358;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:30.10:478,30,0	1/1:5,1:6:18.06:328,18,0	0/0:13,0:13:38.92:0,39,1571	0/0:16,0:13:39.13:0,39,1630	1/1:15,0:15:30.10:488,30,0	1/1:8,0:8:24.08:382,24,0	1/1:9,0:8:21.07:337,21,0	1/1:10,0:8:21.07:322,21,0	1/1:11,0:11:27.09:431,27,0	1/1:15,0:15:42.14:645,42,0	1/1:15,0:15:36.12:583,36,0	1/1:5,0:5:8.52:108,9,0	1/1:11,1:12:30.10:509,30,0	1/1:9,0:9:21.07:343,21,0	1/1:7,0:7:18.06:287,18,0	1/1:10,0:10:18.06:290,18,0	1/1:5,0:5:6.02:94,6,0	0/0:22,0:22:66.23:0,66,3288	1/1:3,0:3:9.03:134,9,0	1/1:10,0:10:30.10:481,30,0	1/1:18,0:18:20.36:339,20,0	1/1:10,0:10:30.10:479,30,0	1/1:12,0:12:33.11:533,33,0	1/1:12,2:14:27.09:441,27,0	1/1:12,0:12:33.11:528,33,0	1/1:12,0:12:24.08:369,24,0	1/1:11,0:11:33.11:538,33,0	1/1:4,0:4:12.04:205,12,0
chr10	99345842	.	TCCC	T	16003.51	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=12.325;DP=538;FS=0.468;HRun=3;HaplotypeScore=314.9854;InbreedingCoeff=0.9740;MQ=80.23;MQ0=0;MQRankSum=-12.637;QD=34.34;ReadPosRankSum=6.110;VQSLOD=2.9781;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:26:78.23:968,78,0	1/1:1,6:7:18.06:224,18,0	0/0:34,0:34:99:0,102,2275	0/0:22,0:22:57.69:0,58,1388	1/1:5,21:26:52.35:608,52,0	1/1:2,20:22:63.15:790,63,0	1/1:1,14:15:45.13:558,45,0	1/1:0,14:12:36.07:422,36,0	1/1:3,29:32:92.07:1113,92,0	1/1:1,32:33:99:1247,99,0	1/1:2,20:22:59.30:711,59,0	1/1:1,23:24:72.02:892,72,0	1/1:1,25:26:78.24:977,78,0	1/1:1,16:17:50.83:606,51,0	1/1:1,24:25:75.21:920,75,0	1/1:1,21:22:64.69:787,65,0	1/1:1,13:14:42.12:514,42,0	0/0:16,0:16:34.62:0,35,1061	1/1:3,5:8:21.05:254,21,0	1/1:0,12:12:34.92:427,35,0	1/1:3,7:10:22.58:244,23,0	1/1:0,18:18:48.11:571,48,0	1/1:1,9:10:30.09:365,30,0	1/1:2,16:18:36.07:429,36,0	1/1:1,15:16:44.89:528,45,0	1/1:0,31:31:93.27:1176,93,0	1/1:2,13:15:45.12:556,45,0	1/1:0,3:3:9.03:115,9,0
chr10	99345846	.	TCCTTCTAGG	T	31264.32	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=12.431;DP=518;FS=3.555;HRun=0;HaplotypeScore=312.3357;InbreedingCoeff=0.9675;MQ=78.03;MQ0=0;MQRankSum=-12.164;QD=70.42;ReadPosRankSum=7.636;VQSLOD=3.9971;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:75.26:1921,75,0	1/1:0,6:6:18.06:457,18,0	0/0:33,0:32:93.31:0,93,4064	0/0:23,0:23:69.20:0,69,2764	1/1:3,21:24:48.16:1187,48,0	1/1:1,20:21:63.22:1614,63,0	1/1:0,14:14:42.14:1078,42,0	1/1:4,10:12:26.88:644,27,0	1/1:2,28:30:87.30:2182,87,0	1/1:3,30:33:93.32:2411,93,0	1/1:1,20:21:63.22:1513,63,0	1/1:1,23:24:72.25:1831,72,0	1/1:0,25:25:75.26:1925,75,0	1/1:1,16:17:51.04:1234,51,0	1/1:0,24:24:72.25:1832,72,0	1/1:1,21:22:66.12:1608,66,0	1/1:0,13:13:39.13:996,39,0	0/0:18,0:18:48.64:0,49,2193	1/1:0,5:5:15.05:396,15,0	1/1:0,12:12:36.12:893,36,0	1/1:1,7:8:17.73:429,18,0	1/1:2,16:18:45.15:1136,45,0	1/1:0,9:9:27.09:689,27,0	1/1:1,16:17:33.11:838,33,0	1/1:1,15:16:42.08:1019,42,0	1/1:2,28:30:84.29:2187,84,0	1/1:0,13:13:39.13:1013,39,0	1/1:0,3:3:9.03:232,9,0
chr10	99346243	.	AAG	A	732.40	PASS	AB=0.975;AC=32;AF=0.762;AN=42;BaseQRankSum=1.222;DP=404;FS=1.633;HRun=0;HaplotypeScore=93.2234;InbreedingCoeff=0.1366;MQ=64.79;MQ0=12;MQRankSum=-0.407;QD=2.61;ReadPosRankSum=-0.262;VQSLOD=1.7573;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:7,0:7:3.01:32,3,0	./.	./.	1/1:21,0:21:5.75:39,6,0	1/1:17,0:17:2.84:14,3,0	1/1:12,0:12:11.69:91,12,0	./.	1/1:9,1:10:6.02:63,6,0	0/0:17,0:14:0.47:0,0,1	1/1:20,1:21:5.90:58,6,0	./.	1/1:15,0:15:8.99:84,9,0	1/1:14,0:14:8.07:53,8,0	1/1:11,0:11:10.89:83,11,0	0/0:9,0:9:7.74:0,8,40	0/1:18,0:18:7.43:65,0,7	0/1:16,2:17:22.65:23,0,55	./.	0/1:14,0:14:5.11:7,0,5	1/1:20,3:22:3.01:32,3,0	1/1:21,0:20:5.97:51,6,0	1/1:17,0:17:3.01:32,3,0	1/1:21,0:18:6.02:63,6,0	0/1:16,0:16:2.62:26,0,3	1/1:5,0:5:3.01:32,3,0	./.	0/0:7,0:7:2.74:0,3,17
chr10	99346247	.	G	GAA	4841.42	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=-3.630;DP=411;FS=32.736;HRun=1;HaplotypeScore=83.8837;InbreedingCoeff=0.6021;MQ=60.15;MQ0=13;MQRankSum=1.519;QD=14.54;ReadPosRankSum=2.943;VQSLOD=0.3092;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:3,15:18:2.98:0,3,22	1/1:6,0:6:17.77:137,18,0	0/1:10,0:8:9.42:9,0,62	0/0:15,0:6:11.66:0,12,88	1/1:19,0:19:45.50:332,46,0	1/1:19,0:19:37.97:309,38,0	1/1:11,0:11:23.21:151,23,0	0/0:14,0:12:29.99:0,30,199	0/1:11,0:11:2.18:163,0,2	1/1:18,0:15:28.66:276,29,0	1/1:20,0:20:12.61:281,13,0	1/1:6,0:6:13.56:113,14,0	1/1:16,0:16:21.48:287,21,0	1/1:14,0:14:24.47:186,24,0	1/1:10,0:11:10.18:142,10,0	0/1:8,0:8:39.51:105,0,40	1/1:19,0:19:40.74:341,41,0	0/0:18,0:17:44.76:0,45,368	1/1:13,0:11:14.08:208,14,0	1/1:14,0:14:21.90:250,22,0	1/1:27,0:26:20.21:352,20,0	1/1:21,0:20:29.17:238,29,0	1/1:16,0:16:28.13:219,28,0	1/1:21,0:18:19.35:153,19,0	0/1:19,0:19:13.32:293,0,13	0/0:5,0:5:4.98:0,5,85	1/1:14,0:13:35.83:295,36,0	0/0:8,0:7:15.85:0,16,135
chr10	99346296	.	A	ATT	10532.08	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=0.524;DP=387;FS=2.364;HRun=0;HaplotypeScore=76.2652;InbreedingCoeff=0.8969;MQ=71.88;MQ0=3;MQRankSum=-1.703;QD=31.16;ReadPosRankSum=2.395;VQSLOD=6.3911;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:54.16:869,54,0	1/1:2,0:2:6.02:80,6,0	0/0:19,0:16:42.01:0,42,606	0/0:18,0:14:15.12:0,15,456	1/1:4,20:25:41.83:391,42,0	1/1:12,0:12:33.10:518,33,0	1/1:10,0:10:23.17:269,23,0	1/1:9,18:27:53.01:749,53,0	1/1:8,0:8:24.02:327,24,0	1/1:3,9:13:19.76:279,20,0	1/1:11,0:11:23.72:288,24,0	1/1:9,0:9:23.56:312,24,0	1/1:11,0:11:33.07:475,33,0	1/1:11,0:11:32.11:449,32,0	1/1:13,0:13:38.14:573,38,0	1/1:10,0:10:25.58:338,26,0	1/1:17,0:17:44.74:617,45,0	0/0:12,0:12:33.06:0,33,443	1/1:1,3:4:8.98:146,9,0	1/1:4,19:24:52.84:563,53,0	1/1:23,0:22:42.61:677,43,0	1/1:6,7:13:15.01:170,15,0	1/1:2,8:13:8.59:68,9,0	1/1:19,0:18:47.61:649,48,0	1/1:15,0:15:45.10:701,45,0	1/1:1,6:7:21.07:313,21,0	1/1:12,0:12:36.12:579,36,0	1/1:4,0:4:11.95:130,12,0
chr10	99347123	.	AG	A	8911.24	PASS	AB=0.767;AC=54;AF=0.964;AN=56;BaseQRankSum=3.206;DP=570;FS=1.274;HRun=1;HaplotypeScore=113.7441;InbreedingCoeff=-0.0346;MQ=58.53;MQ0=0;MQRankSum=3.019;QD=15.63;ReadPosRankSum=5.160;VQSLOD=5.0807;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:65.84:530,66,0	1/1:0,7:7:17.68:116,18,0	1/1:5,0:4:8.64:48,9,0	0/1:3,0:3:8.78:58,0,9	1/1:0,27:27:79.65:530,80,0	1/1:1,28:29:79.14:472,79,0	1/1:0,24:24:67.08:382,67,0	1/1:2,32:34:64.94:444,65,0	1/1:1,11:12:13.21:167,13,0	1/1:0,27:27:77.03:400,77,0	1/1:0,26:26:64.98:443,65,0	1/1:0,13:13:32.27:196,32,0	1/1:1,18:19:53.33:325,53,0	1/1:0,22:22:55.57:323,56,0	1/1:0,20:20:52.67:308,53,0	1/1:1,13:14:37.37:218,37,0	1/1:0,14:14:41.11:249,41,0	1/1:0,13:13:32.28:199,32,0	0/1:3,21:24:5.79:228,0,6	1/1:0,27:26:65.13:458,65,0	1/1:0,15:15:43.86:255,44,0	1/1:0,32:32:85.04:517,85,0	1/1:1,20:21:25.11:275,25,0	1/1:1,15:16:19.97:215,20,0	1/1:0,13:13:38.14:238,38,0	1/1:1,33:34:94.65:535,95,0	1/1:1,33:34:96.73:573,97,0	1/1:0,12:12:35.22:211,35,0
chr10	99347723	.	ACC	A	2739.14	PASS	AB=0.600;AC=45;AF=0.865;AN=52;BaseQRankSum=-4.010;DP=310;FS=31.804;HRun=5;HaplotypeScore=43.9790;InbreedingCoeff=0.5610;MQ=94.62;MQ0=25;MQRankSum=-3.920;QD=16.50;ReadPosRankSum=3.200;VQSLOD=-0.4766;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:3,6:9:0:0,0,0	1/1:1,4:5:6.02:72,6,0	0/0:64,0:25:41.16:0,41,808	0/0:63,0:24:23.57:0,24,581	1/1:0,2:2:3.01:37,3,0	1/1:2,0:1:2.99:24,3,0	1/1:7,0:7:11.96:116,12,0	1/1:21,0:20:39.08:503,39,0	1/1:5,0:4:6.02:82,6,0	1/1:3,7:9:21.05:262,21,0	1/1:3,5:8:8.56:112,9,0	./.	1/1:1,2:2:3.01:38,3,0	1/1:6,2:7:12.01:145,12,0	1/1:7,0:6:9.03:124,9,0	1/1:3,0:3:6.02:83,6,0	1/1:8,1:6:9.03:115,9,0	0/0:11,0:8:15.05:0,15,224	1/1:5,8:12:23.60:269,24,0	1/1:2,3:5:5.99:60,6,0	1/1:7,0:7:11.87:106,12,0	1/1:4,5:9:15.05:188,15,0	./.	1/1:8,0:5:6.02:74,6,0	1/1:6,0:6:6.02:82,6,0	1/1:7,0:6:18.06:235,18,0	1/1:6,0:4:3.01:41,3,0	1/1:6,0:5:9.03:113,9,0
chr10	99347726	.	CCCTTTT	C	2702.92	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=-3.191;DP=322;FS=22.706;HRun=0;HaplotypeScore=53.7024;InbreedingCoeff=0.0041;MQ=90.99;MQ0=38;MQRankSum=0.193;QD=17.22;ReadPosRankSum=3.039;VQSLOD=1.1981;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:7.84:0,8,76	1/1:5,0:5:5.91:53,6,0	0/0:67,0:27:49.45:0,49,1363	0/0:70,0:22:32.87:0,33,961	0/1:3,0:3:31.45:31,0,56	1/1:2,0:1:2.99:24,3,0	0/1:7,0:6:59.24:59,0,67	1/1:1,14:16:42.12:691,42,0	1/1:4,0:2:6.02:82,6,0	0/1:10,0:8:25.76:219,0,26	1/1:8,0:7:8.35:111,8,0	0/0:4,0:2:3.01:0,3,41	1/1:4,0:2:3.01:38,3,0	1/1:8,0:7:10.17:142,10,0	0/1:7,0:5:43.32:112,0,43	1/1:5,0:4:6.02:83,6,0	0/1:12,0:5:46.04:103,0,46	0/0:14,0:10:23.26:0,23,376	0/1:13,0:11:3.58:222,0,4	0/1:5,0:4:41.52:51,0,42	0/1:5,0:5:29.50:29,0,71	0/1:6,0:6:1.72:169,0,2	0/0:2,0:2:3.01:0,3,59	0/1:6,0:4:13.10:65,0,13	0/1:4,0:3:27.54:73,0,28	1/1:4,5:7:18.06:308,18,0	0/1:7,0:5:30.95:31,0,61	1/1:3,4:5:9.03:180,9,0
chr10	99349428	.	CG	C	2117.68	PASS	AB=0.870;AC=19;AF=0.950;AN=20;BaseQRankSum=2.181;DP=892;FS=0.000;HRun=1;HaplotypeScore=38.4281;InbreedingCoeff=-0.0804;MQ=7.74;MQ0=817;MQRankSum=0.517;QD=5.54;ReadPosRankSum=-2.405;VQSLOD=-0.4946;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:26,5:5:12.04:167,12,0	./.	./.	1/1:36,10:10:27.09:376,27,0	./.	./.	./.	./.	1/1:28,4:5:11.93:168,12,0	1/1:41,3:4:9.03:122,9,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:56,14:14:33.11:460,33,0	./.	1/1:15,5:5:9.03:125,9,0	1/1:33,8:7:15.05:209,15,0	./.	1/1:34,10:9:24.08:335,24,0	1/1:31,3:3:9.03:126,9,0	./.	0/1:17,3:5:79.94:111,0,80
chr10	99349491	.	CT	C	2414.15	PASS	AC=26;AF=1.000;AN=26;DP=726;FS=0.000;HRun=7;HaplotypeScore=57.2708;InbreedingCoeff=-0.0497;MQ=11.01;MQ0=618;QD=7.86;VQSLOD=-0.0392;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:5,5:5:15.03:153,15,0	./.	./.	1/1:14,13:17:33.06:330,33,0	1/1:31,2:2:6.01:61,6,0	./.	./.	./.	1/1:16,8:8:24.05:245,24,0	1/1:9,8:8:18.04:183,18,0	./.	./.	./.	./.	1/1:22,1:1:3.01:31,3,0	./.	./.	./.	1/1:31,19:19:48.10:487,48,0	./.	1/1:3,10:11:24.05:245,24,0	1/1:10,9:11:21.04:214,21,0	./.	1/1:11,11:13:33.07:336,33,0	1/1:33,5:5:14.99:142,15,0	1/1:16,2:1:3.01:31,3,0	1/1:12,1:2:3.01:31,3,0
chr10	99350951	.	C	CTT	8318.74	PASS	AB=0.778;AC=24;AF=0.429;AN=56;BaseQRankSum=4.774;DP=578;FS=17.481;HRun=3;HaplotypeScore=204.9086;InbreedingCoeff=-0.7649;MQ=40.59;MQ0=27;MQRankSum=-5.633;QD=15.97;ReadPosRankSum=6.490;VQSLOD=0.3947;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,7:16:64.83:264,0,65	0/1:13,2:14:99:267,0,238	0/1:37,0:12:11.97:12,0,263	0/0:28,0:11:24.07:0,24,315	0/1:41,12:53:99:1307,0,239	0/1:18,5:20:99:522,0,191	0/1:7,3:9:88.67:89,0,137	0/1:17,8:24:99:241,0,277	0/1:11,8:15:99:240,0,152	0/1:22,1:22:99:316,0,215	0/1:20,5:25:99:517,0,234	0/1:3,5:6:80.55:81,0,93	0/1:9,6:15:99:260,0,151	0/1:6,7:10:99:102,0,113	0/1:9,5:10:99:175,0,139	0/1:12,10:19:99:295,0,165	0/1:10,5:12:87.91:88,0,172	0/0:13,0:13:13.07:0,13,361	0/1:15,0:14:99:144,0,216	0/1:23,5:27:99:447,0,398	0/0:8,2:9:6.93:0,7,65	0/1:12,7:18:99:408,0,205	0/1:17,13:25:99:603,0,239	0/0:6,0:6:9.03:0,9,105	0/1:21,11:33:99:756,0,335	0/1:14,13:24:99:578,0,234	0/1:14,8:20:99:379,0,197	0/1:11,2:13:99:228,0,127
chr10	99350953	.	TTC	T	5610.57	PASS	AB=0.885;AC=24;AF=0.429;AN=56;BaseQRankSum=7.795;DP=576;FS=19.273;HRun=0;HaplotypeScore=212.9075;InbreedingCoeff=-0.7486;MQ=40.37;MQ0=27;MQRankSum=-8.036;QD=10.87;ReadPosRankSum=4.986;VQSLOD=2.8901;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,2:16:99:187,0,120	0/1:10,5:14:99:233,0,335	0/1:38,0:11:12.10:12,0,299	0/0:30,0:12:24.08:0,24,405	0/1:32,22:54:99:912,0,530	0/1:16,8:21:99:390,0,283	0/1:10,0:9:11.15:11,0,261	0/1:23,0:22:99:218,0,502	0/1:17,3:16:99:214,0,268	0/1:14,8:21:99:316,0,481	0/1:15,9:24:99:444,0,373	0/1:8,0:6:45.78:46,0,140	0/1:16,0:16:99:104,0,279	0/1:13,0:10:67.50:68,0,222	0/1:12,1:9:99:118,0,184	0/1:20,1:18:63.11:63,0,284	0/1:14,0:11:71.96:72,0,239	0/0:14,0:14:31.51:0,32,557	0/1:10,5:14:99:144,0,331	0/1:19,7:25:99:335,0,608	0/0:10,0:9:9.97:0,10,127	0/1:17,2:18:99:245,0,295	0/1:26,4:25:99:402,0,348	0/0:6,0:6:9.03:0,9,133	0/1:27,5:32:99:428,0,494	0/1:22,5:24:99:269,0,352	0/1:20,3:21:99:371,0,351	0/1:13,0:13:9.39:9,0,241
chr10	99350972	.	TCCC	T	1762.71	PASS	AB=0.842;AC=18;AF=0.321;AN=56;BaseQRankSum=13.597;DP=538;FS=1.353;HRun=3;HaplotypeScore=225.9514;InbreedingCoeff=-0.4881;MQ=42.38;MQ0=15;MQRankSum=-9.112;QD=4.98;ReadPosRankSum=3.481;VQSLOD=-0.1346;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,1:12:20.79:21,0,167	0/1:9,5:14:99:172,0,574	0/0:37,0:6:5.32:0,5,149	0/0:37,0:15:31.66:0,32,589	0/1:39,6:44:99:173,0,1416	0/1:16,6:21:99:197,0,813	0/0:8,0:8:24.03:0,24,501	0/0:15,0:15:45.15:0,45,1038	0/1:11,4:14:99:124,0,478	0/1:29,0:27:48.89:49,0,1188	0/1:25,3:28:99:185,0,982	0/1:8,1:9:36.54:37,0,385	0/1:11,2:13:42.98:43,0,557	0/1:10,2:12:11.57:12,0,622	0/0:14,1:13:6.56:0,7,563	0/0:15,1:15:13.95:0,14,656	0/1:6,1:7:16.64:17,0,406	0/0:21,0:21:57.17:0,57,1240	0/0:11,0:10:27.09:0,27,625	0/1:21,7:28:99:128,0,1299	0/0:9,0:9:17.93:0,18,364	0/1:12,3:14:71.06:71,0,611	0/1:20,7:25:99:160,0,536	0/1:4,1:5:22.32:22,0,68	0/1:17,8:25:99:155,0,728	0/1:24,4:28:64.44:64,0,1080	0/1:13,7:20:99:292,0,744	0/0:13,0:13:31.03:0,31,475
chr10	99350981	.	TCCCTC	T	1876.23	PASS	AB=0.848;AC=18;AF=0.321;AN=56;BaseQRankSum=13.323;DP=547;FS=0.900;HRun=0;HaplotypeScore=236.0165;InbreedingCoeff=-0.4933;MQ=43.06;MQ0=12;MQRankSum=-9.549;QD=5.27;ReadPosRankSum=0.393;VQSLOD=2.4152;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,1:14:38.31:38,0,376	0/1:11,5:16:99:217,0,908	0/0:37,0:6:12.95:0,13,321	0/0:37,0:15:30.95:0,31,619	0/1:37,6:42:72.72:73,0,2112	0/1:15,6:20:99:257,0,1107	0/0:9,0:8:24.08:0,24,754	0/0:18,0:18:45.11:0,45,1205	0/1:12,4:15:99:156,0,634	0/1:29,0:27:14.30:14,0,1760	0/1:24,3:27:97.05:97,0,1475	0/1:6,1:7:28.03:28,0,559	0/1:10,2:12:52.15:52,0,799	0/1:10,2:12:19.06:19,0,883	0/0:14,1:13:0.03:0,0,747	0/0:18,1:18:15.91:0,16,1120	0/1:8,1:9:18.31:18,0,566	0/0:19,0:19:51.18:0,51,1575	0/0:11,0:10:27.09:0,27,732	0/1:21,7:28:99:164,0,1753	0/0:10,0:10:20.56:0,21,514	0/1:13,3:15:88.85:89,0,831	0/1:21,6:25:99:200,0,795	0/1:7,1:8:16.25:16,0,90	0/1:16,8:24:99:181,0,1004	0/1:22,4:26:73.59:74,0,1659	0/1:14,7:21:99:339,0,1025	0/0:15,0:15:41.36:0,41,804
chr10	99351018	.	CCTTT	C	2132.95	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=-3.106;DP=541;FS=13.298;HRun=0;HaplotypeScore=192.1020;InbreedingCoeff=-0.1252;MQ=46.37;MQ0=11;MQRankSum=-1.355;QD=6.22;ReadPosRankSum=-4.241;VQSLOD=0.8744;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:25.79:0,26,260	0/0:13,0:13:5.61:0,6,189	0/0:26,0:9:12.04:0,12,285	0/0:28,0:9:11.77:0,12,133	0/1:35,0:34:60.55:61,0,362	0/1:23,0:21:17.98:18,0,289	0/1:16,0:14:67.61:68,0,118	1/1:10,3:13:20.93:242,21,0	0/1:20,0:18:32.26:48,0,32	0/1:23,0:20:63.51:64,0,199	0/0:24,0:24:18.23:0,18,349	0/1:6,0:6:24.78:25,0,70	0/1:15,0:15:94.58:95,0,137	0/1:13,0:11:51.22:51,0,92	0/1:15,0:13:23.77:24,0,78	0/0:15,0:14:0.91:0,1,196	0/1:14,0:14:61.89:62,0,143	0/0:28,0:27:59.83:0,60,1334	0/1:12,0:10:37.87:38,0,125	0/0:28,0:28:7.50:0,7,225	0/1:14,0:14:33.02:33,0,135	0/0:20,0:20:13.08:0,13,132	1/1:24,0:22:6.58:66,7,0	1/1:9,0:9:2.90:16,3,0	0/1:26,0:26:1.06:123,0,1	1/1:10,14:24:54:861,54,0	0/1:28,0:27:66.21:66,0,258	1/1:6,7:12:1.08:343,1,0
chr10	99351030	.	T	TC	2041.91	PASS	AB=0.967;AC=38;AF=0.679;AN=56;BaseQRankSum=1.905;DP=517;FS=4.666;HRun=0;HaplotypeScore=162.3872;InbreedingCoeff=0.3490;MQ=47.55;MQ0=12;MQRankSum=4.967;QD=5.09;ReadPosRankSum=-2.582;VQSLOD=2.8871;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:14:10:47,0,10	0/1:8,0:8:6.81:10,0,7	0/0:26,0:6:15.05:0,15,200	0/0:26,0:9:18.60:0,19,196	1/1:33,0:33:29.01:156,29,0	1/1:19,0:16:11.12:176,11,0	0/1:14,1:13:7.53:52,0,8	0/0:11,0:11:18.11:0,18,143	0/1:19,0:17:8.03:21,0,8	1/1:24,1:22:35.84:222,36,0	1/1:22,0:22:20.59:160,21,0	1/1:11,0:11:7.17:45,7,0	1/1:16,0:16:7.17:168,7,0	1/1:13,1:12:13.94:76,14,0	1/1:16,0:15:17.78:112,18,0	1/1:13,0:12:15.35:86,15,0	1/1:13,3:16:10.38:172,10,0	0/0:31,0:30:66.69:0,67,920	1/1:12,1:11:1.30:101,1,0	0/1:24,0:24:0.77:46,0,1	0/1:12,1:14:17.34:24,0,17	0/1:16,0:16:0.87:55,0,1	1/1:22,0:20:3.90:51,4,0	1/1:9,0:9:6.83:43,7,0	1/1:23,0:23:14.53:83,15,0	0/0:22,0:22:53.28:0,53,363	1/1:25,1:25:35.73:298,36,0	0/1:11,1:11:16.04:16,0,180
chr10	99351044	.	CTCTT	C	1228.25	PASS	AB=0.609;AC=5;AF=0.089;AN=56;BaseQRankSum=-2.909;DP=486;FS=0.000;HRun=0;HaplotypeScore=169.4852;InbreedingCoeff=0.4726;MQ=45.79;MQ0=11;MQRankSum=-1.379;QD=23.17;ReadPosRankSum=0.830;VQSLOD=3.4426;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:16.62:0,17,603	0/0:6,0:6:18.06:0,18,454	0/0:18,0:4:5.91:0,6,94	0/0:20,0:6:12.03:0,12,218	0/0:31,0:31:65.78:0,66,1275	0/0:16,0:14:41.94:0,42,828	0/0:12,0:10:24.08:0,24,533	0/1:5,9:13:29.29:313,0,29	0/0:16,0:15:9.02:0,9,146	0/0:22,0:19:51.08:0,51,1101	0/0:22,0:22:57.08:0,57,1268	0/0:12,0:11:27.08:0,27,460	0/0:11,0:11:27.08:0,27,463	0/0:11,0:9:21.07:0,21,486	0/0:19,0:19:21.03:0,21,382	0/0:16,0:15:35.94:0,36,658	0/0:18,0:18:15.83:0,16,414	0/0:34,0:31:65.17:0,65,1578	0/0:10,0:8:19.31:0,19,365	0/0:23,0:23:30.10:0,30,657	0/0:11,0:10:12.51:0,13,270	0/0:17,0:17:21.07:0,21,392	0/0:20,0:20:6.49:0,6,91	0/0:12,0:12:2.39:0,2,43	0/0:19,0:19:3.01:0,3,38	1/1:13,13:26:32.54:723,33,0	0/0:22,0:21:52.91:0,53,944	1/1:9,4:12:1.54:309,2,0
chr10	99351053	.	TCTCC	T	1922.79	PASS	AB=0.984;AC=18;AF=0.321;AN=56;BaseQRankSum=-2.374;DP=495;FS=4.776;HRun=0;HaplotypeScore=167.1211;InbreedingCoeff=-0.1677;MQ=45.32;MQ0=9;MQRankSum=-5.044;QD=6.84;ReadPosRankSum=-2.469;VQSLOD=1.6290;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,1:21:99:362,0,394	0/0:6,0:6:18.06:0,18,290	0/0:11,0:2:6.02:0,6,78	0/0:16,0:6:11.36:0,11,121	0/1:28,0:27:99:154,0,716	0/1:20,0:18:99:166,0,425	0/0:11,0:10:15.61:0,16,337	0/1:14,0:12:9.25:128,0,9	0/0:18,0:17:5.98:0,6,54	0/1:23,0:20:53.62:54,0,775	0/1:25,0:25:77.68:78,0,748	0/0:11,0:10:21.98:0,22,266	0/1:12,1:13:83.38:83,0,182	0/1:11,0:9:31.98:32,0,322	0/0:19,0:19:8.25:0,8,127	0/1:15,0:14:99:101,0,311	0/1:19,0:18:99:185,0,225	0/0:34,1:32:26.38:0,26,973	0/1:8,0:6:23.74:24,0,155	0/0:26,0:26:26.85:0,27,329	0/1:13,1:13:99:164,0,142	0/0:19,0:19:14.51:0,15,157	0/0:22,0:22:6:0,6,37	0/1:13,0:13:4.85:60,0,5	0/0:19,0:19:2.99:0,3,23	1/1:23,2:25:30.60:281,31,0	0/1:21,1:21:79.33:79,0,596	1/1:9,0:9:25.07:139,25,0
chr10	99351057	.	C	CCTTCCTTCCTTCCTTT	18207.74	PASS	AB=0.941;AC=42;AF=0.750;AN=56;BaseQRankSum=-6.435;DP=518;FS=1.070;HRun=0;HaplotypeScore=204.6722;InbreedingCoeff=0.2475;MQ=45.46;MQ0=9;MQRankSum=-0.940;QD=40.19;ReadPosRankSum=-0.931;VQSLOD=3.9858;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:21:99:255,0,100	1/1:7,0:7:21.05:452,21,0	0/1:10,0:2:0:0,0,0	0/0:13,0:6:11.51:0,12,111	1/1:27,1:27:69.21:1848,69,0	1/1:21,0:19:54.04:1609,54,0	1/1:12,0:11:24.07:440,24,0	0/0:15,0:13:32.67:0,33,501	1/1:3,16:22:6.02:345,6,0	1/1:22,0:19:51.15:1607,51,0	1/1:24,0:24:54.15:1591,54,0	1/1:11,0:10:27.05:944,27,0	1/1:14,0:14:36.12:1335,36,0	1/1:11,0:9:27.07:675,27,0	1/1:3,11:19:6.02:463,6,0	1/1:13,0:14:40.83:780,41,0	0/1:20,0:19:9.32:779,0,9	0/0:20,0:34:56.06:0,56,1017	0/1:10,0:8:31.15:368,0,31	1/1:3,16:28:24.04:528,24,0	0/1:14,0:13:29.25:349,0,29	1/1:1,16:20:12.04:639,12,0	1/1:1,16:27:8.53:503,9,0	0/1:2,10:17:18.58:214,0,19	1/1:0,17:22:3.01:232,3,0	0/1:25,0:25:15.14:15,0,805	1/1:22,0:21:57.17:2203,57,0	0/1:9,0:9:34.09:34,0,360
chr10	99351097	.	T	TC	467.01	PASS	AB=0.897;AC=12;AF=0.214;AN=56;BaseQRankSum=8.154;DP=453;FS=5.438;HRun=0;HaplotypeScore=109.9499;InbreedingCoeff=-0.2824;MQ=67.40;MQ0=5;MQRankSum=-7.104;QD=2.28;ReadPosRankSum=-2.316;VQSLOD=1.9456;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:2.99:0,3,617	0/1:3,1:4:35.52:36,0,114	0/0:27,0:21:53.27:0,53,595	0/0:11,0:9:17.85:0,18,182	0/1:23,2:24:20.32:20,0,697	0/1:21,1:21:66.31:66,0,537	0/0:14,0:13:39.07:0,39,491	0/0:16,0:16:42.14:0,42,587	0/1:18,1:17:21.77:22,0,261	0/1:13,6:17:99:142,0,392	0/1:12,5:17:99:173,0,366	0/1:13,1:13:8.44:8,0,447	0/0:13,0:13:25.13:0,25,402	0/1:6,1:6:29.38:29,0,190	0/1:16,0:15:34.19:34,0,204	0/0:17,0:16:4.62:0,5,553	0/1:19,1:20:7.90:8,0,537	0/0:18,0:18:22.46:0,22,435	0/0:6,0:6:18.05:0,18,236	0/0:15,0:15:33.06:0,33,428	0/0:13,0:12:30.09:0,30,393	0/0:13,0:13:12.41:0,12,232	0/0:16,0:16:21.05:0,21,251	0/0:18,0:19:17.54:0,18,274	0/1:11,0:11:7.25:7,0,191	0/0:24,0:24:59.43:0,59,764	0/1:26,4:28:67.10:67,0,840	0/0:4,0:4:12.04:0,12,155
chr10	99356464	.	GT	G	10338.16	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=0.932;DP=478;FS=5.921;HRun=9;HaplotypeScore=52.0572;InbreedingCoeff=0.9055;MQ=79.93;MQ0=0;MQRankSum=-5.031;QD=23.60;ReadPosRankSum=2.052;VQSLOD=5.7815;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,36:40:99:933,102,0	1/1:0,5:5:15.01:137,15,0	0/0:14,0:14:4.58:0,5,216	0/0:11,0:11:20.87:0,21,191	1/1:1,16:17:39.02:357,39,0	1/1:3,18:21:54.02:494,54,0	1/1:3,17:20:51.02:467,51,0	1/1:2,17:19:51:460,51,0	1/1:3,18:21:48.03:439,48,0	1/1:2,18:20:54.02:490,54,0	1/1:0,15:15:45.02:412,45,0	1/1:1,14:15:36.02:330,36,0	1/1:0,15:15:42.02:384,42,0	1/1:1,17:18:42.02:384,42,0	1/1:0,14:14:42.02:384,42,0	1/1:0,18:18:54.03:494,54,0	1/1:2,28:30:72.04:659,72,0	0/0:15,0:15:42.12:0,42,485	1/1:1,14:15:45.02:411,45,0	1/1:0,16:16:42.01:384,42,0	1/1:3,15:18:36.01:328,36,0	1/1:2,8:10:24.01:220,24,0	1/1:1,14:15:36.02:329,36,0	1/1:0,18:18:54.03:494,54,0	1/1:1,11:12:30.02:275,30,0	1/1:1,19:20:57.03:522,57,0	1/1:4,18:22:54.02:494,54,0	1/1:2,2:4:6:55,6,0
chr10	99356697	.	GA	G	4911.13	PASS	AB=0.704;AC=40;AF=0.714;AN=56;BaseQRankSum=4.620;DP=451;FS=3.891;HRun=11;HaplotypeScore=99.8337;InbreedingCoeff=0.7578;MQ=67.40;MQ0=0;MQRankSum=-2.718;QD=14.70;ReadPosRankSum=2.395;VQSLOD=5.2944;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.03:0,66,647	1/1:4,5:9:14.91:116,15,0	0/1:16,2:17:0.65:1,0,172	0/0:9,0:9:13.54:0,14,136	1/1:5,12:17:35.93:295,36,0	0/1:5,8:13:1.52:185,0,2	1/1:3,5:8:20.87:164,21,0	0/0:26,1:27:47.49:0,47,682	1/1:8,6:14:23.81:186,24,0	1/1:9,8:17:29.49:226,29,0	1/1:4,10:15:22.64:165,23,0	1/1:4,10:14:13.13:213,13,0	0/1:4,7:11:1:148,0,1	1/1:3,8:11:20.93:166,21,0	1/1:3,7:9:20.97:172,21,0	1/1:6,7:13:20.94:172,21,0	1/1:4,15:19:41.95:345,42,0	0/0:17,0:17:45.05:0,45,450	1/1:7,14:24:25.02:373,25,0	1/1:4,18:23:49.89:396,50,0	1/1:9,10:19:32.90:268,33,0	0/1:6,5:11:8.04:145,0,8	1/1:7,13:20:38.92:320,39,0	1/1:1,9:10:20.97:172,21,0	1/1:5,13:18:35.90:295,36,0	0/0:19,0:19:39.07:0,39,398	1/1:4,16:20:47.88:388,48,0	0/0:18,0:19:56.94:0,57,572
chr10	99356729	.	G	GA	6049.61	PASS	AB=0.750;AC=47;AF=0.839;AN=56;BaseQRankSum=-1.477;DP=436;FS=0.569;HRun=11;HaplotypeScore=92.7150;InbreedingCoeff=0.5456;MQ=57.96;MQ0=1;MQRankSum=-1.667;QD=15.12;ReadPosRankSum=-0.212;VQSLOD=5.0537;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:18:39.97:216,40,0	1/1:0,3:3:9.02:91,9,0	0/0:11,0:10:16.45:0,16,99	0/0:9,0:8:8.55:0,9,56	1/1:10,9:19:32.58:378,33,0	1/1:2,11:15:22.86:317,23,0	1/1:3,14:17:10.64:281,11,0	1/1:16,15:33:36.51:512,37,0	1/1:6,9:15:13.02:323,13,0	1/1:3,15:18:42.37:401,42,0	1/1:9,13:22:31.89:410,32,0	1/1:9,1:10:15.14:141,15,0	0/1:5,6:11:10.14:103,0,10	1/1:7,2:9:9.32:75,9,0	1/1:4,4:7:11.82:94,12,0	1/1:3,9:12:5.32:178,5,0	0/1:9,7:17:5.52:224,0,6	0/0:16,0:16:29.83:0,30,232	1/1:8,8:16:14.28:230,14,0	1/1:17,8:25:35.11:338,35,0	1/1:9,9:18:25.50:244,26,0	1/1:1,13:16:28.14:369,28,0	0/1:22,2:24:5.94:6,0,216	1/1:3,1:4:3.89:32,4,0	1/1:11,9:20:20.36:294,20,0	1/1:7,9:16:24.03:236,24,0	1/1:10,6:16:20.34:200,20,0	1/1:6,11:17:18.81:357,19,0
chr10	99356799	.	A	AACAC	3722.39	PASS	AB=1.000;AC=45;AF=0.865;AN=52;BaseQRankSum=-2.868;DP=467;FS=8.967;HRun=0;HaplotypeScore=142.6096;InbreedingCoeff=0.3232;MQ=64.69;MQ0=19;MQRankSum=-3.634;QD=9.59;ReadPosRankSum=-1.559;VQSLOD=2.1947;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:14:6:54,6,0	1/1:5,0:5:6:81,6,0	./.	./.	1/1:21,0:21:24.03:374,24,0	1/1:22,0:21:11.07:157,11,0	1/1:18,0:18:8.64:174,9,0	1/1:21,0:20:0.47:1,0,0	1/1:11,0:11:6.02:106,6,0	1/1:16,0:15:10.90:206,11,0	1/1:21,0:20:24.06:405,24,0	1/1:11,0:10:9.02:143,9,0	1/1:14,0:14:13.23:137,13,0	1/1:16,0:15:4.15:126,4,0	1/1:16,0:15:16.42:209,16,0	1/1:10,0:9:9.01:138,9,0	0/1:14,0:14:14.26:123,0,14	1/1:12,7:20:5.15:71,5,0	1/1:23,0:23:2.70:6,3,0	1/1:21,0:21:24.33:344,24,0	1/1:15,0:15:10.47:86,10,0	0/1:19,0:18:17.90:97,0,18	1/1:23,0:22:15.03:242,15,0	1/1:8,0:8:10.56:136,11,0	0/1:14,0:14:32.28:190,0,32	0/0:11,0:11:18.04:0,18,237	1/1:9,0:9:6.02:116,6,0	0/0:13,0:14:33.01:0,33,434
chr10	99356834	.	A	ACT	2951.11	PASS	AB=0.946;AC=26;AF=0.464;AN=56;BaseQRankSum=7.861;DP=438;FS=1.660;HRun=0;HaplotypeScore=129.2036;InbreedingCoeff=-0.3387;MQ=41.38;MQ0=27;MQRankSum=-4.599;QD=9.00;ReadPosRankSum=7.271;VQSLOD=3.0412;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:15:5.91:0,6,51	0/1:6,0:6:1.73:72,0,2	0/0:23,0:4:9.01:0,9,98	0/0:27,0:15:35.11:0,35,371	0/1:18,0:17:20.40:158,0,20	0/1:17,1:18:64.35:99,0,64	0/1:13,0:13:2.96:113,0,3	1/1:25,0:22:43.05:375,43,0	0/1:6,0:7:9.08:51,0,9	0/1:14,1:14:26.07:181,0,26	0/1:18,0:17:36.65:130,0,37	0/1:9,1:9:8.97:131,0,9	0/1:12,1:12:2.82:98,0,3	0/1:14,1:14:20.90:107,0,21	0/1:14,2:15:14.52:194,0,15	1/1:8,0:7:7.83:71,8,0	0/1:15,0:14:18.35:175,0,18	0/0:29,0:27:43.34:0,43,327	0/1:8,1:9:40.47:88,0,40	0/1:19,1:21:25.49:359,0,25	0/1:16,2:15:4.63:105,0,5	0/1:17,0:15:32.83:33,0,86	0/1:18,0:18:23.36:93,0,23	1/1:8,1:8:11.01:111,11,0	0/1:12,3:14:7.04:253,0,7	0/1:13,0:13:21.18:21,0,32	0/1:10,0:10:24.97:98,0,25	0/0:13,0:13:16.42:0,16,165
chr10	99356836	.	A	ACT	2690.23	PASS	AB=0.880;AC=30;AF=0.536;AN=56;BaseQRankSum=0.013;DP=431;FS=38.559;HRun=0;HaplotypeScore=130.7885;InbreedingCoeff=0.0974;MQ=43.05;MQ0=25;MQRankSum=-0.775;QD=9.47;ReadPosRankSum=2.794;VQSLOD=1.7347;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:15:4.85:0,5,34	0/1:5,1:6:12.50:47,0,12	0/0:24,0:5:12:0,12,119	0/0:27,0:15:38.83:0,39,363	1/1:14,4:17:26.56:299,27,0	1/1:15,2:16:4.69:125,5,0	1/1:11,2:13:2.77:134,3,0	0/0:24,0:22:15.24:0,15,110	1/1:6,1:7:1.48:106,1,0	0/1:17,0:16:16.20:16,0,129	1/1:11,7:17:30.61:317,31,0	0/1:8,2:9:20.65:80,0,21	0/1:12,1:12:13.13:171,0,13	0/1:12,3:14:7.52:82,0,8	1/1:12,3:14:10.24:210,10,0	1/1:7,2:8:9.03:129,9,0	0/1:14,1:14:50.57:72,0,51	0/0:29,0:28:47.24:0,47,349	0/1:7,0:7:2.59:42,0,3	0/1:16,4:20:28.27:281,0,28	1/1:17,0:14:8.20:95,8,0	0/1:13,2:13:8.14:99,0,8	0/1:13,5:18:0.96:199,0,1	1/1:7,2:8:9.43:98,9,0	0/1:12,3:14:19.98:164,0,20	0/0:13,0:13:20.85:0,21,251	0/1:8,2:10:46.77:99,0,47	0/0:13,0:13:37.26:0,37,451
chr10	99356840	.	A	ACT	3804.05	PASS	AB=0.889;AC=38;AF=0.679;AN=56;BaseQRankSum=6.950;DP=424;FS=1.716;HRun=0;HaplotypeScore=132.2612;InbreedingCoeff=0.0624;MQ=44.18;MQ0=24;MQRankSum=-4.760;QD=10.99;ReadPosRankSum=4.816;VQSLOD=3.4816;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:16:21.09:28,0,21	0/1:6,1:7:14.57:80,0,15	0/0:25,0:7:14.91:0,15,130	0/0:24,0:15:31.36:0,31,375	1/1:13,4:16:21.80:202,22,0	0/1:14,2:15:24.86:122,0,25	0/1:12,2:14:2.24:135,0,2	1/1:23,0:21:27.48:348,27,0	1/1:7,1:8:9.32:72,9,0	1/1:16,0:16:10.46:278,10,0	0/1:11,7:17:4.05:171,0,4	0/1:6,2:8:10.02:135,0,10	1/1:13,1:13:6.29:166,6,0	0/1:12,2:14:0.96:138,0,1	1/1:10,3:12:9.48:210,9,0	1/1:7,2:8:11.88:115,12,0	1/1:13,1:13:26.26:222,26,0	0/0:29,0:28:50.18:0,50,384	0/1:6,0:6:4.58:106,0,5	1/1:15,4:19:18.56:399,19,0	1/1:17,0:14:11.66:115,12,0	0/1:13,2:13:57.67:58,0,59	1/1:10,5:16:1.34:127,1,0	1/1:7,2:8:10.56:114,11,0	0/1:13,3:15:8.82:266,0,9	0/1:12,0:12:20.22:28,0,20	1/1:10,2:12:13.72:163,14,0	0/1:13,0:13:5.57:6,0,135
chr10	99356879	.	CTT	C	6843.65	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=8.806;DP=269;FS=2.916;HRun=3;HaplotypeScore=91.3840;InbreedingCoeff=0.7159;MQ=87.67;MQ0=0;MQRankSum=-9.953;QD=32.28;ReadPosRankSum=1.866;VQSLOD=4.6018;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,5:7:9.03:137,9,0	1/1:0,9:9:24.08:366,24,0	0/0:24,0:22:63.20:0,63,1128	0/0:14,0:13:32.94:0,33,608	1/1:1,11:12:6.06:259,6,0	1/1:1,6:7:15.05:229,15,0	1/1:1,8:9:21.07:321,21,0	1/1:4,5:9:15.03:207,15,0	1/1:0,5:5:6.02:91,6,0	1/1:2,14:16:32.20:587,32,0	1/1:0,5:5:12.04:183,12,0	1/1:0,11:11:33.11:503,33,0	1/1:1,7:8:18.06:275,18,0	1/1:0,6:5:12.04:183,12,0	1/1:0,12:12:30.10:457,30,0	1/1:0,4:4:6.02:92,6,0	1/1:1,7:8:18.06:275,18,0	0/0:18,0:18:42.14:0,42,810	1/1:0,6:6:15.05:229,15,0	1/1:0,6:6:18.06:274,18,0	1/1:1,6:7:3.01:46,3,0	1/1:1,2:3:3.01:46,3,0	1/1:3,14:17:16.12:483,16,0	1/1:0,3:3:6.02:91,6,0	1/1:2,10:12:24.08:366,24,0	1/1:2,10:12:27.09:412,27,0	1/1:0,13:13:36.12:549,36,0	1/1:1,4:5:12.04:183,12,0
chr10	99358897	.	C	CT	1267.74	PASS	AB=0.921;AC=8;AF=0.143;AN=56;BaseQRankSum=-7.574;DP=505;FS=2.474;HRun=10;HaplotypeScore=58.1128;InbreedingCoeff=0.6708;MQ=80.51;MQ0=0;MQRankSum=0.788;QD=14.41;ReadPosRankSum=-4.209;VQSLOD=2.7886;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,1:24:5.49:0,5,312	0/0:8,0:8:17.97:0,18,148	0/1:19,1:18:16.89:17,0,149	0/0:14,0:15:15.14:0,15,75	0/0:18,0:18:47.93:0,48,394	0/0:24,0:25:58.94:0,59,473	0/0:21,1:22:24.88:0,25,406	1/1:10,25:37:71.15:760,71,0	0/0:17,0:19:43.96:0,44,348	0/0:19,0:19:44.94:0,45,369	0/0:17,0:17:41.93:0,42,345	0/0:10,0:10:29.97:0,30,246	0/0:15,1:18:20.03:0,20,349	0/0:15,0:15:38.93:0,39,320	0/0:14,0:14:32.95:0,33,271	0/0:16,0:16:37.99:0,38,301	0/0:31,0:31:77.89:0,78,640	0/0:18,0:18:50.89:0,51,413	0/0:22,0:22:27.36:0,27,386	0/0:22,0:22:50.89:0,51,415	0/1:7,1:8:8.01:8,0,148	0/0:8,0:8:14.98:0,15,123	0/0:21,0:22:55.69:0,56,448	0/0:17,0:17:47.90:0,48,388	0/0:16,0:16:42.82:0,43,344	1/1:1,19:20:54.05:534,54,0	0/0:20,0:21:61.94:0,62,495	1/1:0,3:3:9.02:96,9,0
chr10	99359542	.	TG	T	16597.58	PASS	AB=0.900;AC=45;AF=0.804;AN=56;BaseQRankSum=7.507;DP=651;FS=2.198;HRun=4;HaplotypeScore=69.2724;InbreedingCoeff=0.8802;MQ=91.88;MQ0=0;MQRankSum=-6.669;QD=31.08;ReadPosRankSum=8.380;VQSLOD=3.9126;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:3,43:46:99:1511,126,0	1/1:1,9:10:24.07:288,24,0	0/0:27,0:27:72.04:0,72,882	0/0:26,0:26:63.17:0,63,797	1/1:0,37:37:99:1259,105,0	1/1:1,28:29:78.24:936,78,0	1/1:0,20:20:60.18:720,60,0	0/0:42,0:42:99:0,120,1608	1/1:0,27:27:78.24:936,78,0	1/1:2,21:23:60.17:708,60,0	1/1:0,23:23:63.19:754,63,0	1/1:0,20:20:54.17:647,54,0	1/1:0,17:17:48.15:576,48,0	1/1:0,27:27:72.22:864,72,0	1/1:1,23:24:60.18:720,60,0	1/1:0,20:20:54.17:648,54,0	1/1:1,25:26:69.21:828,69,0	0/0:18,0:18:48.16:0,48,666	1/1:2,11:13:33.10:396,33,0	1/1:1,28:29:81.25:972,81,0	1/1:1,19:20:48.15:576,48,0	1/1:2,21:23:60.18:719,60,0	1/1:0,24:24:54.62:649,55,0	1/1:1,14:15:36.11:432,36,0	1/1:0,19:19:54.17:648,54,0	0/1:16,2:18:20.83:21,0,557	1/1:2,22:24:66.20:791,66,0	0/0:4,0:4:12.04:0,12,168
chr10	99359799	.	A	ACTCT	43025.86	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-11.673;DP=745;FS=3.276;HRun=0;HaplotypeScore=105.0603;InbreedingCoeff=0.9997;MQ=89.00;MQ0=1;MQRankSum=-11.502;QD=65.69;ReadPosRankSum=6.760;VQSLOD=7.0365;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,52:57:99:3527,132,0	1/1:1,14:17:39.09:945,39,0	0/0:31,0:31:78.05:0,78,1487	0/0:42,0:42:99:0,105,1870	1/1:3,33:39:87.30:2327,87,0	1/1:5,23:29:60.21:1618,60,0	1/1:2,19:22:63.22:1669,63,0	1/1:10,18:28:72.25:1934,72,0	1/1:3,24:30:69.24:1850,69,0	1/1:1,23:24:72.23:1852,72,0	1/1:2,22:24:60.21:1617,60,0	1/1:1,21:22:60.21:1617,60,0	1/1:4,22:26:66.23:1680,66,0	1/1:0,17:17:48.16:1294,48,0	1/1:4,40:44:99:3218,120,0	1/1:2,18:21:51.18:1364,51,0	1/1:2,25:27:75.26:2009,75,0	0/0:17,0:17:48.12:0,48,873	1/1:1,8:10:30.08:740,30,0	1/1:1,25:26:75.26:1985,75,0	1/1:6,24:31:63.22:1699,63,0	1/1:0,23:24:54.19:1454,54,0	1/1:2,20:24:56.80:1461,57,0	1/1:3,15:20:45.15:1200,45,0	1/1:4,20:25:51.18:1374,51,0	1/1:0,22:23:69.22:1771,69,0	1/1:3,30:33:72.25:1940,72,0	1/1:1,10:11:33.11:883,33,0
chr10	99360027	.	G	GA	1739.41	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.468;DP=627;FS=11.548;HRun=8;HaplotypeScore=58.8765;InbreedingCoeff=0.9979;MQ=82.41;MQ0=0;MQRankSum=0.340;QD=23.83;ReadPosRankSum=-2.911;VQSLOD=2.5277;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,111,999	0/0:14,0:14:29.99:0,30,275	0/0:22,0:22:39.05:0,39,421	0/0:20,0:19:21.29:0,21,255	0/0:30,0:30:72.04:0,72,658	0/0:24,0:24:66.01:0,66,599	0/0:19,0:19:48.02:0,48,439	1/1:7,23:30:41.78:734,42,0	0/0:28,0:28:69.02:0,69,632	0/0:24,0:24:63.03:0,63,576	0/0:21,0:21:54.01:0,54,490	0/0:25,0:25:66.03:0,66,604	0/0:17,0:17:48.03:0,48,439	0/0:22,0:22:60.02:0,60,544	0/0:14,0:14:33.01:0,33,302	0/0:23,0:23:63.01:0,63,570	0/0:29,0:29:74.95:0,75,667	0/0:12,0:12:30.01:0,30,274	0/0:20,0:20:51.03:0,51,467	0/0:23,0:23:66.02:0,66,599	0/0:23,0:23:60.03:0,60,549	0/0:16,0:16:48.03:0,48,439	0/0:21,0:21:51.02:0,51,467	0/0:19,0:19:57.03:0,57,522	0/0:20,0:20:50.97:0,51,459	1/1:4,24:28:47.75:802,48,0	0/0:24,0:24:66.03:0,66,604	1/1:3,12:15:30.09:346,30,0
chr10	99360561	.	ATC	A	3215	PASS	AB=0.797;AC=41;AF=0.820;AN=50;BaseQRankSum=-0.474;DP=488;FS=17.714;HRun=0;HaplotypeScore=92.5967;InbreedingCoeff=0.4690;MQ=61.86;MQ0=6;MQRankSum=2.330;QD=8.81;ReadPosRankSum=3.887;VQSLOD=1.9458;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,2:4:9.02:99,9,0	./.	./.	1/1:14,7:22:17.88:177,18,0	0/1:9,0:17:9.73:98,0,10	1/1:13,0:15:13.86:115,14,0	0/0:28,0:24:6.02:0,6,74	1/1:13,0:14:20.59:172,21,0	1/1:23,2:25:37.72:365,38,0	1/1:11,2:14:11.85:105,12,0	1/1:12,0:14:17.75:161,18,0	1/1:15,4:19:21.05:229,21,0	1/1:4,3:7:11.98:117,12,0	1/1:13,4:18:12.01:132,12,0	1/1:6,4:10:15.04:163,15,0	1/1:11,4:17:26.57:239,27,0	0/1:19,1:20:30.05:30,0,344	1/1:22,1:22:12.90:118,13,0	1/1:10,5:17:12.32:114,12,0	0/1:13,5:18:23.89:142,0,24	1/1:21,2:24:29.74:292,30,0	1/1:11,1:12:6.02:66,6,0	1/1:12,2:16:8.86:80,9,0	1/1:19,1:23:20.47:156,20,0	0/0:25,0:26:35.96:0,36,343	1/1:9,4:13:18.05:194,18,0	0/0:13,0:13:9.02:0,9,108
chr10	99360639	.	G	GT	9609.65	PASS	AB=0.667;AC=49;AF=0.875;AN=56;BaseQRankSum=-1.970;DP=552;FS=0.000;HRun=0;HaplotypeScore=117.3552;InbreedingCoeff=0.7226;MQ=50.81;MQ0=49;MQRankSum=-0.813;QD=22.35;ReadPosRankSum=3.401;VQSLOD=6.2150;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,22:26:37.17:459,37,0	1/1:3,2:6:9.02:109,9,0	0/0:47,0:10:22.98:0,23,241	0/0:49,0:12:16.93:0,17,128	1/1:8,14:19:12.04:183,12,0	1/1:5,15:20:42.07:594,42,0	1/1:3,14:15:32.96:430,33,0	1/1:7,20:25:39.44:791,39,0	1/1:3,14:16:35.92:483,36,0	1/1:9,7:15:2.41:325,2,0	1/1:3,14:17:23.89:294,24,0	1/1:5,10:12:29.17:359,29,0	1/1:4,16:18:45.15:665,45,0	1/1:8,11:15:34.49:421,34,0	1/1:9,8:14:23.73:321,24,0	1/1:2,8:10:26.90:308,27,0	1/1:3,13:16:39.07:530,39,0	0/0:23,0:21:60.18:0,60,807	1/1:8,14:14:42.13:585,42,0	1/1:5,14:17:23.83:339,24,0	1/1:14,10:18:13.47:196,13,0	0/1:7,6:13:15.33:265,0,15	1/1:4,11:15:22.81:318,23,0	1/1:8,13:19:20.37:257,20,0	1/1:3,17:20:38.96:540,39,0	1/1:7,11:17:42.11:586,42,0	1/1:3,4:4:12.04:182,12,0	1/1:2,1:3:6:70,6,0
chr10	99360664	.	GTGTA	G	4543.47	PASS	AB=0.978;AC=32;AF=0.571;AN=56;BaseQRankSum=2.176;DP=543;FS=0.000;HRun=0;HaplotypeScore=139.1738;InbreedingCoeff=-0.4096;MQ=47.61;MQ0=50;MQRankSum=-5.725;QD=9.65;ReadPosRankSum=3.910;VQSLOD=4.1534;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:19:12.13:218,0,12	1/1:6,0:6:9.01:89,9,0	0/1:58,0:8:7.03:7,0,99	0/0:57,0:13:11.19:0,11,267	0/1:16,1:17:46.70:129,0,47	1/1:18,1:19:0.10:387,0,0	0/1:17,0:14:96.87:173,0,97	0/1:25,0:22:64.19:272,0,64	1/1:17,0:17:7.56:269,8,0	0/1:8,0:8:21.94:84,0,22	0/1:14,2:15:70.32:70,0,74	0/1:14,1:14:1.03:205,0,1	0/1:15,1:14:36.88:281,0,37	0/1:18,0:14:0.92:262,0,1	1/1:13,0:12:20.90:231,21,0	0/1:7,0:7:2.97:111,0,3	0/1:13,0:13:70:166,0,70	0/0:14,0:14:36.10:0,36,910	0/1:25,0:18:78.83:229,0,79	0/1:17,0:16:86.19:86,0,91	0/1:40,2:35:21.78:105,0,22	0/1:14,0:13:4.04:149,0,4	0/1:16,1:17:61.76:136,0,62	0/1:20,0:18:51.45:74,0,51	1/1:13,0:13:2.02:221,2,0	0/1:19,1:16:4.14:337,0,4	0/1:12,0:11:5.93:210,0,6	1/1:2,0:2:5.94:42,6,0
chr10	99360668	.	ATGTG	A	8206.55	PASS	AB=0.714;AC=47;AF=0.839;AN=56;BaseQRankSum=0.481;DP=557;FS=5.248;HRun=0;HaplotypeScore=129.8919;InbreedingCoeff=0.5170;MQ=43.30;MQ0=55;MQRankSum=-1.342;QD=19.08;ReadPosRankSum=0.363;VQSLOD=4.3466;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,9:20:24.02:381,24,0	1/1:3,3:6:9.03:148,9,0	0/0:58,0:5:8.97:0,9,123	0/0:55,0:13:22.05:0,22,272	1/1:7,10:17:16.28:261,16,0	1/1:7,12:19:36.12:599,36,0	1/1:14,6:17:27.09:431,27,0	1/1:23,5:25:42.11:638,42,0	1/1:10,7:16:30.02:436,30,0	1/1:5,3:7:9.03:155,9,0	1/1:8,9:15:8.99:121,9,0	1/1:7,9:14:20.05:301,20,0	1/1:7,8:13:24.08:406,24,0	1/1:14,7:16:20.56:537,21,0	1/1:4,11:14:20.28:345,20,0	1/1:2,4:6:12.04:198,12,0	1/1:5,6:11:21.07:350,21,0	0/0:14,0:14:33.11:0,33,824	1/1:19,8:18:30.02:475,30,0	0/1:12,8:17:42.81:154,0,43	0/1:23,20:36:12.63:194,0,13	1/1:4,9:12:18.06:279,18,0	0/1:10,4:15:3.99:254,0,4	1/1:13,6:19:8.51:154,9,0	1/1:6,9:14:24.02:380,24,0	1/1:15,5:16:4.75:535,5,0	1/1:2,10:12:24.08:404,24,0	1/1:2,1:3:6.01:69,6,0
chr10	99360696	.	GGT	G	265.97	PASS	AB=0.901;AC=10;AF=0.179;AN=56;BaseQRankSum=-0.165;DP=587;FS=7.259;HRun=0;HaplotypeScore=134.2545;InbreedingCoeff=-0.2282;MQ=41.59;MQ0=68;MQRankSum=-0.661;QD=1.22;ReadPosRankSum=-1.448;VQSLOD=1.9568;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:14:14.90:0,15,122	0/0:4,0:4:6.01:0,6,91	0/0:51,0:11:19.19:0,19,189	0/0:50,0:11:17.98:0,18,246	0/0:16,1:16:18.06:0,18,277	0/1:20,2:22:67.64:68,0,384	0/0:18,0:15:30.10:0,30,461	0/0:22,0:18:10.58:0,11,182	0/1:11,2:13:39.18:39,0,342	0/1:15,0:10:10.60:11,0,292	0/1:18,1:16:19.61:20,0,171	0/0:19,0:15:15.51:0,16,214	0/0:14,0:13:23.95:0,24,332	0/0:13,0:13:18.06:0,18,272	0/0:19,0:17:18.05:0,18,258	0/0:8,0:7:9.03:0,9,140	0/1:13,2:15:50:50,0,416	0/1:12,6:17:79.96:80,0,184	0/0:26,0:19:27.05:0,27,381	0/0:19,0:16:20.90:0,21,292	0/1:52,3:45:82.76:83,0,166	0/1:18,3:17:8.31:8,0,301	0/0:13,2:15:20.10:0,20,291	0/1:17,2:18:36.29:36,0,356	0/1:18,0:18:12.69:13,0,429	0/0:24,0:17:18.23:0,18,264	0/0:17,0:17:39.12:0,39,574	0/0:0,0:6:9:0,9,79
chr10	99361819	.	TTG	T	4071.63	PASS	AB=0.710;AC=41;AF=0.788;AN=52;BaseQRankSum=5.399;DP=633;FS=6.616;HRun=0;HaplotypeScore=96.5299;InbreedingCoeff=0.1024;MQ=64.73;MQ0=9;MQRankSum=-0.223;QD=7.55;ReadPosRankSum=0.818;VQSLOD=2.8890;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:48:14.68:71,15,0	1/1:8,3:12:11.87:113,12,0	0/0:28,0:20:2.96:0,3,19	./.	0/1:12,7:19:57.41:57,0,75	1/1:14,1:16:14.84:124,15,0	0/1:11,11:24:24.91:139,0,25	./.	1/1:11,10:22:20.72:193,21,0	1/1:23,11:36:29.67:273,30,0	1/1:7,11:19:32.88:330,33,0	1/1:8,7:16:8.86:80,9,0	1/1:13,15:28:41.94:442,42,0	0/1:9,8:18:20.28:187,0,20	1/1:17,5:23:14.87:146,15,0	0/1:20,3:23:32.80:33,0,370	0/1:14,10:25:26.80:109,0,27	0/0:28,0:28:6.60:0,7,482	1/1:15,4:19:9.02:98,9,0	1/1:10,12:23:24.02:248,24,0	0/1:13,10:21:2.86:147,0,3	0/1:12,13:24:0.93:177,0,1	1/1:13,10:23:11.71:132,12,0	1/1:10,16:26:27.07:297,27,0	1/1:7,10:17:18.05:198,18,0	1/1:14,0:19:14.20:70,14,0	1/1:12,15:27:35.68:395,36,0	1/1:4,0:4:2.84:14,3,0
chr10	99362213	.	T	TA	21146.09	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-8.882;DP=647;FS=0.000;HRun=4;HaplotypeScore=56.2753;InbreedingCoeff=0.9992;MQ=83.22;MQ0=0;MQRankSum=-7.337;QD=35.66;ReadPosRankSum=3.200;VQSLOD=5.0690;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,37:38:99:1354,99,0	1/1:2,12:14:30.10:410,30,0	0/0:23,0:23:52:0,52,553	0/0:14,0:14:26.56:0,27,281	1/1:0,18:18:54.14:717,54,0	1/1:0,25:25:66.69:904,67,0	1/1:2,24:26:66.22:903,66,0	1/1:2,31:33:93.28:1226,93,0	1/1:1,22:23:60.20:821,60,0	1/1:2,22:24:66.19:870,66,0	1/1:3,14:17:39.13:533,39,0	1/1:1,28:29:78.26:1065,78,0	1/1:3,17:20:48.16:657,48,0	1/1:1,22:23:57.19:780,57,0	1/1:0,35:35:99:1396,102,0	1/1:2,19:21:45.15:616,45,0	1/1:0,23:23:63.21:862,63,0	0/0:17,0:17:48.14:0,48,545	1/1:0,23:23:69.23:944,69,0	1/1:2,21:23:60.20:820,60,0	1/1:3,39:42:99:1456,108,0	1/1:1,18:19:45.15:611,45,0	1/1:1,17:18:45.15:615,45,0	1/1:3,31:34:93.28:1253,93,0	1/1:2,13:15:33.11:452,33,0	1/1:3,18:21:54.18:736,54,0	1/1:1,17:18:51.17:697,51,0	1/1:0,11:11:33.11:451,33,0
chr10	99363696	.	A	AGAGAGAGAGC	10895.93	PASS	AB=0.773;AC=42;AF=0.750;AN=56;BaseQRankSum=-1.447;DP=694;FS=6.130;HRun=0;HaplotypeScore=234.2697;InbreedingCoeff=0.7301;MQ=65.20;MQ0=8;MQRankSum=-4.413;QD=19.56;ReadPosRankSum=0.774;VQSLOD=3.3818;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:39:5.85:73,6,0	1/1:6,0:6:17.98:414,18,0	0/0:31,0:17:24.84:0,25,392	0/0:53,0:30:40.66:0,41,625	1/1:32,0:32:49.72:449,50,0	1/1:26,0:26:53.67:648,54,0	1/1:9,13:30:18.53:721,19,0	0/1:24,0:24:45.57:46,0,140	0/1:3,0:18:11.79:87,0,12	1/1:26,0:27:55.89:1006,56,0	1/1:25,0:24:23.71:328,24,0	1/1:17,0:16:26.95:320,27,0	1/1:21,0:20:44.25:534,44,0	0/0:4,0:20:5.85:0,6,73	1/1:19,0:20:32.96:530,33,0	1/1:9,4:21:15.52:574,16,0	1/1:32,0:32:36.68:649,37,0	0/0:8,0:7:14.98:0,15,229	1/1:27,0:26:67.52:815,68,0	1/1:31,0:31:48.88:593,49,0	1/1:32,0:30:49.97:473,50,0	1/1:19,0:19:38.80:470,39,0	1/1:32,0:32:35.50:419,36,0	1/1:20,0:20:27.86:399,28,0	1/1:23,0:24:47.60:540,48,0	0/0:16,0:16:35.97:0,36,294	1/1:28,0:29:68.12:808,68,0	0/0:9,0:7:3.01:0,3,49
chr10	99363698	.	A	AGC	1193.81	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=5.538;DP=677;FS=20.569;HRun=0;HaplotypeScore=199.4193;InbreedingCoeff=-0.1545;MQ=66.99;MQ0=8;MQRankSum=-4.101;QD=2.49;ReadPosRankSum=-3.034;VQSLOD=0.3921;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:4.13:4,0,12	0/1:6,0:6:20.60:23,0,21	0/0:31,0:19:34.32:0,34,416	0/0:51,0:30:60.59:0,61,674	0/0:32,0:32:24.44:0,24,283	0/1:26,0:26:50.35:50,0,136	1/1:30,0:30:16.49:85,16,0	1/1:22,0:22:46.52:339,47,0	1/1:18,0:18:5.65:29,6,0	0/1:27,0:27:31.99:32,0,231	0/0:28,0:26:15.37:0,15,149	0/1:17,0:16:33.74:34,0,96	0/1:21,0:20:11.70:12,0,162	0/1:18,0:18:20.58:45,0,21	0/1:22,0:20:12.74:13,0,103	0/1:19,0:19:18.86:19,0,19	0/1:33,0:32:96.15:96,0,158	0/0:7,0:6:14.94:0,15,136	0/1:28,0:27:38.75:39,0,201	0/1:31,0:30:33.26:33,0,166	0/0:30,0:29:36.69:0,37,322	0/1:17,0:17:30.83:31,0,142	0/1:31,0:31:31.71:32,0,135	0/0:19,0:19:6.11:0,6,104	0/1:26,0:26:7.70:8,0,191	1/1:2,15:19:47.27:385,47,0	0/1:29,0:29:5.01:5,0,299	1/1:4,5:7:3.01:54,3,0
chr10	99364485	.	GA	G	10364.98	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.083;DP=502;FS=2.826;HRun=9;HaplotypeScore=88.6680;InbreedingCoeff=0.8112;MQ=69.15;MQ0=1;MQRankSum=-4.114;QD=23.08;ReadPosRankSum=2.101;VQSLOD=5.5770;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,15:19:44.82:397,45,0	1/1:7,6:13:27.01:243,27,0	0/0:25,0:17:2.03:0,2,115	0/0:14,0:10:6.04:0,6,110	1/1:1,16:17:48.03:438,48,0	1/1:2,22:24:69.02:626,69,0	1/1:3,10:13:33.01:301,33,0	1/1:9,19:28:66:593,66,0	1/1:3,12:15:39.02:356,39,0	1/1:4,16:20:48.02:438,48,0	1/1:2,15:17:45.02:411,45,0	1/1:6,10:17:35.02:303,35,0	1/1:5,10:15:39:351,39,0	1/1:3,8:11:30:270,30,0	1/1:4,21:25:66.03:604,66,0	1/1:0,10:10:30.02:274,30,0	1/1:4,16:18:44.91:402,45,0	0/0:13,0:13:39.11:0,39,446	1/1:7,15:22:56.98:513,57,0	1/1:4,23:27:69.03:631,69,0	1/1:1,1:3:3:27,3,0	1/1:0,18:18:54.03:494,54,0	1/1:2,26:28:78.04:711,78,0	1/1:8,6:14:26.97:239,27,0	1/1:6,29:35:96.02:870,96,0	1/1:3,13:16:42.02:383,42,0	1/1:6,12:18:42.01:380,42,0	1/1:0,4:4:12.01:109,12,0
chr10	99364494	.	AT	A	2004.10	PASS	AB=0.992;AC=36;AF=0.643;AN=56;BaseQRankSum=4.510;DP=484;FS=5.509;HRun=1;HaplotypeScore=117.3629;InbreedingCoeff=-0.2030;MQ=64.80;MQ0=1;MQRankSum=-5.628;QD=4.42;ReadPosRankSum=9.846;VQSLOD=-0.2253;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:8.69:89,9,0	1/1:7,2:9:20.52:116,21,0	0/0:15,2:10:12.61:0,13,104	0/1:12,0:8:1.34:1,0,74	1/1:19,0:19:10.53:88,11,0	1/1:23,0:23:43.02:154,43,0	0/1:14,0:14:43.24:51,0,43	0/1:31,0:31:30:30,0,160	0/1:14,1:15:14.35:97,0,14	0/1:20,0:20:53.79:61,0,54	1/1:16,0:16:29.36:116,29,0	0/1:14,0:14:29.83:65,0,30	1/1:15,0:15:0.21:69,0,0	1/1:8,2:10:25.64:150,26,0	0/1:25,0:25:21.97:106,0,22	0/1:11,0:11:4.23:45,0,4	0/1:21,0:19:20.08:75,0,20	0/0:14,0:14:42.11:0,42,561	0/1:22,0:22:49.89:60,0,50	0/1:26,0:26:0.53:124,0,1	1/1:2,0:2:2.68:11,3,0	0/1:21,0:21:18.67:90,0,19	1/1:28,0:28:35.63:195,36,0	0/1:10,0:10:8.69:30,0,9	1/1:33,0:32:27.22:168,27,0	0/1:15,1:16:27.33:77,0,27	0/1:18,0:16:14.63:63,0,15	0/1:5,0:5:11.43:35,0,11
chr10	99364505	.	C	CT	8585.31	PASS	AB=0.718;AC=49;AF=0.875;AN=56;BaseQRankSum=1.309;DP=489;FS=7.429;HRun=11;HaplotypeScore=97.3416;InbreedingCoeff=0.2754;MQ=63.93;MQ0=1;MQRankSum=-3.991;QD=18.62;ReadPosRankSum=0.337;VQSLOD=5.1400;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,10:14:29.96:289,30,0	1/1:2,8:10:3.75:207,4,0	0/0:12,0:8:0.55:0,1,16	0/1:9,1:9:8.24:39,0,8	0/1:8,13:21:38.51:338,0,39	1/1:7,16:23:33.86:513,34,0	1/1:5,9:14:12.82:303,13,0	1/1:14,1:29:19.73:180,20,0	1/1:6,11:17:15.71:316,16,0	1/1:9,9:19:13.76:292,14,0	0/1:7,11:18:33.71:224,0,34	1/1:6,9:15:9.83:281,10,0	1/1:5,10:15:29.97:277,30,0	1/1:3,8:11:29.98:284,30,0	1/1:4,16:20:33.86:513,34,0	1/1:1,11:12:35.94:340,36,0	1/1:9,17:25:21.92:395,22,0	0/0:14,1:15:8.34:0,8,241	1/1:8,17:25:33.08:496,33,0	1/1:6,18:24:31.55:549,32,0	1/1:2,1:3:3.01:30,3,0	1/1:5,12:18:41.91:403,42,0	1/1:9,19:29:2.64:534,3,0	1/1:3,8:11:26.95:249,27,0	1/1:11,20:30:52.41:651,52,0	1/1:3,3:16:40.67:274,41,0	1/1:3,20:21:51.10:517,51,0	1/1:0,2:6:14.47:92,14,0
chr10	99365184	.	C	CTACAA	2792.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.510;DP=708;FS=0.686;HRun=0;HaplotypeScore=126.3781;InbreedingCoeff=0.9975;MQ=90.72;MQ0=0;MQRankSum=-2.949;QD=68.10;ReadPosRankSum=2.485;VQSLOD=4.9882;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,37:41:90.27:2887,90,0	0/0:10,0:10:30.10:0,30,699	0/0:33,0:33:54.83:0,55,1744	0/0:25,0:25:69.23:0,69,1500	0/0:29,0:28:87.25:0,87,1854	0/0:23,0:23:66.21:0,66,1443	0/0:17,0:17:51.17:0,51,1160	0/0:41,0:41:99:0,120,2742	0/0:24,0:24:72.25:0,72,1645	0/0:30,0:30:87.29:0,87,1933	0/0:19,0:19:54.19:0,54,1247	0/0:28,0:28:84.27:0,84,1905	0/0:22,0:22:66.21:0,66,1492	0/0:23,0:23:69.22:0,69,1528	0/0:30,0:30:87.30:0,87,2022	0/0:25,0:25:69.24:0,69,1600	0/0:34,0:34:99:0,102,2310	0/0:20,0:20:60.14:0,60,1240	0/0:26,0:26:78.27:0,78,1804	0/0:26,0:26:75.26:0,75,1697	0/0:34,0:34:99:0,99,2196	0/0:22,0:22:63.19:0,63,1375	0/0:23,0:23:66.21:0,66,1467	0/0:26,0:26:78.27:0,78,1810	0/0:22,0:22:66.23:0,66,1511	0/0:21,0:21:57.19:0,57,1280	0/0:26,0:26:72.23:0,72,1600	0/0:8,0:8:24.08:0,24,559
chr10	99365890	.	G	GA	13654.74	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=3.927;DP=588;FS=11.019;HRun=8;HaplotypeScore=91.7151;InbreedingCoeff=0.9328;MQ=67.17;MQ0=8;MQRankSum=-3.723;QD=25.76;ReadPosRankSum=3.746;VQSLOD=4.7379;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,43:47:95.69:1135,96,0	1/1:0,5:5:15.04:173,15,0	0/0:21,0:15:44.99:0,45,401	0/0:18,0:12:26.84:0,27,223	1/1:2,24:27:72.16:796,72,0	1/1:2,20:22:51.15:589,51,0	1/1:4,16:20:45.13:519,45,0	1/1:8,18:26:61.06:686,61,0	1/1:1,18:18:36.11:415,36,0	1/1:3,19:22:60.18:690,60,0	1/1:3,16:18:46.02:521,46,0	1/1:1,17:18:42.12:485,42,0	1/1:2,9:11:24.07:275,24,0	1/1:1,12:13:33.04:363,33,0	1/1:0,17:17:33.10:378,33,0	1/1:2,19:21:45.13:519,45,0	1/1:6,25:30:72.20:820,72,0	0/0:19,0:19:48.02:0,48,439	1/1:6,25:29:47.98:767,48,0	1/1:5,21:24:63.18:715,63,0	1/1:6,7:13:26.15:328,26,0	1/1:8,13:21:45.11:505,45,0	1/1:5,11:15:26.76:311,27,0	1/1:3,29:32:72.21:828,72,0	1/1:4,11:15:24.07:277,24,0	1/1:4,22:25:64.74:727,65,0	1/1:1,29:29:69.20:795,69,0	1/1:0,2:2:3.01:35,3,0
chr10	99366244	.	TTATC	T	235.74	PASS	AB=0.900;AC=3;AF=0.058;AN=52;BaseQRankSum=-3.971;DP=603;FS=2.977;HRun=0;HaplotypeScore=166.2848;InbreedingCoeff=-0.0633;MQ=64.65;MQ0=70;MQRankSum=0.578;QD=4.37;ReadPosRankSum=-2.479;VQSLOD=2.4995;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:48.13:0,48,957	0/0:17,0:15:23.44:0,23,118	./.	./.	0/0:42,0:35:35.34:0,35,516	0/0:26,0:22:24.95:0,25,91	0/0:15,0:12:8.84:0,9,138	0/0:36,0:27:7.04:0,7,32	0/0:17,0:11:21.06:0,21,283	0/0:28,0:27:45.12:0,45,164	0/0:33,0:25:32.44:0,32,118	0/0:20,0:17:21.07:0,21,319	0/0:20,0:18:21.07:0,21,316	0/0:20,0:17:12.04:0,12,185	0/0:19,0:15:21.07:0,21,324	0/0:26,0:21:29.99:0,30,431	0/0:14,0:13:12.01:0,12,160	0/1:12,9:21:14.62:256,0,15	0/1:17,0:16:33.79:34,0,56	0/0:29,0:26:39.11:0,39,559	0/0:13,0:11:18.06:0,18,279	0/0:13,0:10:9.03:0,9,139	0/0:20,0:17:21.07:0,21,321	0/0:10,0:9:6.02:0,6,92	0/0:18,0:10:12.04:0,12,185	0/1:16,0:13:44.88:45,0,157	0/0:22,0:19:24.08:0,24,368	0/0:9,0:8:11.32:0,11,64
chr10	99366248	.	C	CTA	8292.94	PASS	AB=0.939;AC=46;AF=0.821;AN=56;BaseQRankSum=-0.771;DP=625;FS=2.455;HRun=0;HaplotypeScore=134.7276;InbreedingCoeff=0.6158;MQ=63.71;MQ0=70;MQRankSum=-0.571;QD=15.92;ReadPosRankSum=3.837;VQSLOD=4.8239;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:92.22:0,92,1199	1/1:16,1:15:5.40:98,5,0	0/0:24,0:16:35.26:0,35,516	0/0:20,0:16:29.89:0,30,355	1/1:8,33:34:36:659,36,0	1/1:23,3:22:2.21:16,2,0	1/1:5,10:13:9.03:165,9,0	0/1:31,5:27:54.27:487,0,54	1/1:2,16:12:21.07:385,21,0	1/1:27,0:26:33.51:384,34,0	1/1:35,0:27:17.88:245,18,0	1/1:0,19:16:21.07:384,21,0	1/1:2,17:17:24.08:426,24,0	1/1:0,20:19:12.04:219,12,0	1/1:2,20:18:21.07:384,21,0	1/1:2,24:21:30.10:550,30,0	1/1:1,14:14:12.04:220,12,0	0/0:21,0:21:50.90:0,51,524	1/1:4,15:19:4.68:583,5,0	1/1:5,25:27:39.13:714,39,0	1/1:2,11:11:18.06:329,18,0	1/1:4,10:11:9.03:165,9,0	1/1:6,20:24:21.07:385,21,0	1/1:1,8:8:5.86:110,6,0	1/1:9,11:12:12.04:220,12,0	1/1:11,6:14:35.82:553,36,0	1/1:2,20:19:24.08:439,24,0	0/1:9,0:8:24.78:173,0,25
chr10	99366250	.	ATC	A	4124.12	PASS	AB=0.866;AC=16;AF=0.286;AN=56;BaseQRankSum=-3.553;DP=621;FS=2.074;HRun=0;HaplotypeScore=143.5962;InbreedingCoeff=0.2621;MQ=61.99;MQ0=70;MQRankSum=-2.298;QD=14.78;ReadPosRankSum=0.992;VQSLOD=3.7728;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:96.83:0,97,1502	1/1:1,16:15:14.42:396,14,0	0/0:24,0:16:35.26:0,35,516	0/0:18,0:14:29.89:0,30,355	0/1:33,6:32:5.91:6,0,109	1/1:3,22:21:30.10:459,30,0	0/0:13,3:13:11.52:0,12,88	0/1:25,13:29:99:476,0,141	0/1:17,1:12:9.48:9,0,73	1/1:2,24:25:69.23:1048,69,0	1/1:0,34:26:57.19:868,57,0	0/0:19,0:16:23.13:0,23,150	0/1:18,0:17:17.75:18,0,86	0/0:24,0:21:17.53:0,18,123	0/0:23,0:19:26.28:0,26,192	0/0:24,1:20:2.24:0,2,152	0/1:15,0:14:21.09:21,0,35	0/0:21,0:21:24.11:0,24,400	0/1:22,0:21:99:441,0,158	0/0:26,2:24:9.92:0,10,198	0/0:11,1:10:17.42:0,17,94	0/0:14,1:12:11.67:0,12,70	0/0:25,2:24:26.18:0,26,189	0/0:10,0:9:5.81:0,6,31	0/0:13,7:12:14.62:0,15,104	0/1:9,8:14:60.75:233,0,61	0/0:20,0:17:26.10:0,26,163	0/1:5,4:8:94.91:148,0,95
chr10	99366323	.	C	CAT	1909.33	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.091;DP=455;FS=0.635;HRun=0;HaplotypeScore=175.2573;InbreedingCoeff=0.7592;MQ=71.74;MQ0=4;MQRankSum=0.513;QD=33.50;ReadPosRankSum=0.383;VQSLOD=4.9130;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:17:36.12:0,36,462	0/0:13,0:13:20.61:0,21,266	0/0:14,0:11:7.57:0,8,79	0/0:14,0:13:5.93:0,6,56	0/0:22,0:22:23.90:0,24,238	0/0:13,0:13:20.94:0,21,218	0/0:10,0:9:18.06:0,18,250	1/1:8,26:34:75.23:1313,75,0	0/0:11,0:10:9.03:0,9,115	0/0:30,0:30:81.26:0,81,1082	0/0:27,0:27:44.66:0,45,493	0/0:14,0:14:30.08:0,30,399	0/0:13,0:13:14.84:0,15,194	0/0:16,0:15:21.07:0,21,280	0/0:13,0:13:20.98:0,21,233	0/0:10,0:10:21.07:0,21,280	0/0:8,0:8:12:0,12,127	0/0:18,0:18:42.14:0,42,538	0/0:17,0:17:42.14:0,42,560	0/0:25,0:25:42.01:0,42,486	0/0:13,0:12:8.95:0,9,96	0/0:15,0:15:17.89:0,18,157	0/0:25,0:25:38.67:0,39,418	0/0:8,0:8:11.94:0,12,136	0/0:13,0:13:21.03:0,21,265	1/1:5,12:17:0.54:542,1,0	0/0:13,0:13:24.08:0,24,328	1/1:2,4:6:12.04:179,12,0
chr10	99366352	.	A	AG	1980.18	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=4.845;DP=381;FS=4.311;HRun=2;HaplotypeScore=115.4666;InbreedingCoeff=0.5692;MQ=63.48;MQ0=22;MQRankSum=-4.133;QD=9.04;ReadPosRankSum=1.847;VQSLOD=1.5510;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:10:20.69:0,21,258	1/1:4,2:6:15.73:121,16,0	0/0:62,0:22:57.49:0,57,655	0/0:70,0:15:24.05:0,24,284	1/1:15,0:15:5.04:38,5,0	1/1:7,0:7:8.97:70,9,0	1/1:8,0:7:17.81:161,18,0	0/1:12,0:11:8.38:54,0,8	1/1:4,0:3:3.01:30,3,0	1/1:18,2:20:37.38:341,37,0	1/1:14,2:16:14.98:150,15,0	1/1:11,0:11:22.46:135,22,0	1/1:11,0:11:5.74:39,6,0	1/1:7,0:6:14.96:138,15,0	1/1:6,0:6:8.21:54,8,0	1/1:7,0:7:6.76:27,7,0	1/1:2,1:3:3.45:23,3,0	0/0:16,0:16:21.46:0,21,531	1/1:5,0:3:4.87:17,5,0	1/1:13,3:14:13.76:80,14,0	1/1:5,1:5:11.92:103,12,0	1/1:12,0:12:2.98:22,3,0	1/1:10,1:11:8.77:62,9,0	1/1:6,1:7:2.30:23,2,0	1/1:7,1:8:11.58:86,12,0	1/1:10,1:11:25.68:195,26,0	1/1:8,1:9:17.61:154,18,0	1/1:1,0:1:2.96:19,3,0
chr10	99366354	.	GAGA	G	5687.92	PASS	AB=0.632;AC=47;AF=0.839;AN=56;BaseQRankSum=2.266;DP=379;FS=5.446;HRun=0;HaplotypeScore=106.2597;InbreedingCoeff=0.6049;MQ=62.88;MQ0=29;MQRankSum=-3.528;QD=26.33;ReadPosRankSum=1.935;VQSLOD=4.8101;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:10:24.90:0,25,505	1/1:2,3:6:18.06:324,18,0	0/0:62,0:22:57.11:0,57,1018	0/0:69,0:15:27.34:0,27,445	1/1:0,14:14:6.02:107,6,0	1/1:1,6:7:9.03:154,9,0	1/1:3,3:7:18.06:297,18,0	0/1:5,7:10:18.76:388,0,19	1/1:0,1:3:3.01:55,3,0	1/1:2,15:17:51.15:857,51,0	1/1:5,11:16:18.06:278,18,0	1/1:1,9:11:24.08:437,24,0	1/1:0,6:10:6.02:107,6,0	1/1:3,3:6:15.03:199,15,0	1/1:2,4:6:9.03:165,9,0	1/1:1,5:6:12.04:221,12,0	1/1:2,2:3:6.02:105,6,0	0/0:15,0:16:25.06:0,25,1085	1/1:2,2:2:6.02:111,6,0	1/1:6,10:13:15.05:287,15,0	1/1:2,4:5:12.04:214,12,0	1/1:2,11:12:3.01:55,3,0	1/1:3,9:10:8.95:165,9,0	1/1:2,4:7:5.88:110,6,0	1/1:3,5:8:12.03:192,12,0	1/1:3,7:10:30.07:490,30,0	1/1:1,8:9:18.06:314,18,0	1/1:0,1:1:3.01:55,3,0
chr10	99366355	.	A	AG	868.40	PASS	AB=0.938;AC=46;AF=0.821;AN=56;BaseQRankSum=6.840;DP=378;FS=2.270;HRun=2;HaplotypeScore=116.4489;InbreedingCoeff=0.5025;MQ=62.60;MQ0=31;MQRankSum=-5.192;QD=4.04;ReadPosRankSum=4.803;VQSLOD=0.8179;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:10:24.96:0,25,310	1/1:4,2:6:10.81:59,11,0	0/0:62,0:22:59.59:0,60,689	0/0:70,0:15:26.81:0,27,302	1/1:14,0:14:3.74:12,4,0	1/1:7,0:7:8.56:43,9,0	1/1:8,0:7:8.33:36,8,0	0/1:11,0:9:16.14:16,0,36	1/1:4,0:3:2.74:12,3,0	1/1:16,2:17:17.07:170,17,0	1/1:14,2:15:8.43:34,8,0	1/1:11,0:11:19.83:84,20,0	1/1:10,0:10:5.37:24,5,0	1/1:6,0:5:6.97:31,7,0	1/1:6,0:6:6.88:31,7,0	1/1:7,0:6:2.73:11,3,0	1/1:3,1:3:3.27:14,3,0	0/0:16,0:16:43.63:0,44,582	1/1:4,0:2:4.26:13,4,0	1/1:13,3:13:13.85:72,14,0	1/1:7,1:6:10.48:42,10,0	1/1:13,0:12:2.80:13,3,0	1/1:11,1:10:8.31:41,8,0	0/1:6,1:7:2.04:9,0,2	1/1:6,1:7:8.26:38,8,0	1/1:10,0:9:18.30:112,18,0	1/1:8,1:9:16.04:100,16,0	1/1:1,0:1:2.84:14,3,0
chr10	99366359	.	AG	A	1314.08	PASS	AB=0.938;AC=44;AF=0.815;AN=54;BaseQRankSum=5.745;DP=376;FS=12.375;HRun=2;HaplotypeScore=116.0297;InbreedingCoeff=0.4811;MQ=59.89;MQ0=41;MQRankSum=-3.900;QD=6.23;ReadPosRankSum=5.589;VQSLOD=-0.5183;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:11:24.95:0,25,361	1/1:3,2:5:13.07:85,13,0	0/0:61,0:21:47.03:0,47,611	0/0:69,0:14:23.69:0,24,288	1/1:14,0:14:1.63:12,2,0	1/1:9,0:7:8.93:63,9,0	1/1:6,0:5:11.71:78,12,0	0/1:14,0:9:23.11:23,0,49	./.	1/1:15,2:16:28.16:247,28,0	1/1:12,3:14:7.51:47,8,0	1/1:12,0:11:19.75:123,20,0	1/1:8,0:8:5.91:40,6,0	1/1:5,0:4:5.90:41,6,0	1/1:7,0:6:8.78:55,9,0	1/1:6,0:5:9.80:46,10,0	1/1:3,1:3:4.52:24,5,0	0/0:16,1:17:16.84:0,17,678	1/1:6,0:2:5.49:24,5,0	1/1:14,3:13:12.41:93,12,0	1/1:7,2:6:2.97:32,3,0	1/1:14,0:12:2.96:19,3,0	1/1:11,1:10:8.91:66,9,0	0/1:6,1:7:10.71:15,0,11	1/1:5,1:6:5.96:43,6,0	1/1:8,0:7:20.15:147,20,0	1/1:8,1:9:14.99:135,15,0	1/1:1,0:1:2.96:19,3,0
chr10	99366363	.	GAGAGA	G	4228.47	PASS	AB=1.000;AC=46;AF=0.852;AN=54;BaseQRankSum=5.577;DP=363;FS=12.447;HRun=0;HaplotypeScore=108.6404;InbreedingCoeff=0.4477;MQ=53.65;MQ0=42;MQRankSum=-1.556;QD=19.31;ReadPosRankSum=2.385;VQSLOD=3.8097;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:12:19.25:0,19,332	1/1:5,0:5:15.05:312,15,0	0/0:57,0:17:33.53:0,34,474	0/0:68,0:13:13.06:0,13,163	1/1:14,0:14:3.01:38,3,0	1/1:7,1:6:9.03:177,9,0	1/1:6,0:5:11.71:185,12,0	0/1:12,0:7:44.73:102,0,45	./.	1/1:14,1:13:36.12:726,36,0	1/1:15,0:14:9.03:168,9,0	1/1:12,0:11:3.12:346,3,0	1/1:6,1:7:6.02:95,6,0	1/1:5,0:4:6.02:116,6,0	1/1:5,2:6:9.03:154,9,0	1/1:6,0:5:9.03:134,9,0	1/1:4,0:3:6.02:130,6,0	0/1:17,0:17:0:0,0,1105	1/1:6,0:2:6.02:118,6,0	1/1:14,1:11:12.04:207,12,0	1/1:9,0:6:6.02:112,6,0	1/1:12,1:11:3.01:56,3,0	1/1:12,0:10:8.95:178,9,0	1/1:7,0:7:2.97:57,3,0	1/1:6,0:6:6.02:96,6,0	1/1:7,1:7:21.07:380,21,0	1/1:9,0:9:15.05:282,15,0	1/1:1,0:1:3.01:58,3,0
chr10	99366367	.	GA	G	2163.66	PASS	AB=0.906;AC=44;AF=0.815;AN=54;BaseQRankSum=6.707;DP=348;FS=14.364;HRun=2;HaplotypeScore=94.9267;InbreedingCoeff=0.4615;MQ=48.48;MQ0=44;MQRankSum=-1.769;QD=11.27;ReadPosRankSum=1.631;VQSLOD=0.8117;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,3:12:18.89:0,19,138	1/1:5,0:5:15.04:171,15,0	0/0:55,1:16:33.91:0,34,391	0/0:64,0:9:17.89:0,18,202	1/1:12,0:12:3.01:38,3,0	1/1:7,0:5:9.01:92,9,0	1/1:5,0:5:11.85:99,12,0	0/1:10,3:7:7.97:102,0,8	./.	1/1:16,0:14:35.95:336,36,0	1/1:13,0:12:8.97:92,9,0	1/1:10,1:10:2.94:170,3,0	1/1:7,0:7:5.93:51,6,0	1/1:4,0:3:6:53,6,0	1/1:7,0:6:9.03:105,9,0	1/1:4,2:5:9.02:105,9,0	1/1:4,0:3:5.96:53,6,0	0/0:16,1:17:12.71:0,13,624	1/1:6,0:2:6.01:58,6,0	1/1:14,0:10:12.03:142,12,0	0/1:11,0:7:28.52:63,0,29	1/1:12,0:10:3.01:36,3,0	1/1:10,0:8:9:93,9,0	1/1:6,0:6:2.84:33,3,0	1/1:6,0:6:6.02:73,6,0	1/1:6,2:7:20.93:187,21,0	1/1:8,0:8:14.96:138,15,0	1/1:1,0:1:3.01:35,3,0
chr10	99366368	.	A	AG	2239.94	PASS	AB=0.867;AC=44;AF=0.815;AN=54;BaseQRankSum=6.822;DP=335;FS=11.924;HRun=1;HaplotypeScore=88.2955;InbreedingCoeff=0.4385;MQ=48.79;MQ0=45;MQRankSum=-2.535;QD=12.51;ReadPosRankSum=1.538;VQSLOD=1.1910;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,1:12:18.69:0,19,123	1/1:2,3:5:15.04:179,15,0	0/0:56,0:16:35.82:0,36,396	0/0:63,0:9:18.35:0,18,192	1/1:0,10:10:3.01:38,3,0	1/1:5,2:5:9.01:98,9,0	1/1:2,3:5:11.77:105,12,0	0/1:11,0:5:5.01:102,0,5	./.	1/1:6,9:13:36.05:371,36,0	1/1:4,7:10:8.98:95,9,0	1/1:3,7:9:0.02:151,0,0	1/1:1,5:6:2.97:20,3,0	1/1:2,2:3:6:56,6,0	1/1:5,2:6:9.03:110,9,0	1/1:3,2:4:9.03:107,9,0	1/1:2,2:3:5.97:56,6,0	0/0:17,0:17:8.15:0,8,617	1/1:4,2:2:6.02:63,6,0	1/1:9,5:10:12.03:145,12,0	0/1:7,4:7:29:63,0,29	1/1:5,6:9:3.01:36,3,0	1/1:4,6:8:9:93,9,0	1/1:1,3:4:3.01:36,3,0	1/1:1,5:6:6.02:76,6,0	1/1:4,4:7:21.01:206,21,0	1/1:1,7:8:15.01:151,15,0	1/1:0,1:1:3.01:38,3,0
chr10	99366372	.	GA	G	942.99	PASS	AB=0.670;AC=37;AF=0.685;AN=54;BaseQRankSum=6.170;DP=305;FS=13.902;HRun=1;HaplotypeScore=84.4530;InbreedingCoeff=0.3436;MQ=39.12;MQ0=42;MQRankSum=-1.979;QD=6.74;ReadPosRankSum=2.053;VQSLOD=-0.6387;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:12:18.81:0,19,280	1/1:1,3:4:12.01:113,12,0	0/0:50,1:12:29.28:0,29,348	0/0:55,0:8:7.52:0,8,159	0/0:0,10:10:2.49:0,2,9	1/1:4,2:4:8.81:75,9,0	1/1:2,3:5:9.88:78,10,0	0/0:12,0:6:13.50:0,14,105	./.	1/1:4,9:11:19.73:185,20,0	1/1:1,7:7:3.01:30,3,0	0/1:3,7:9:36.57:82,0,37	1/1:1,5:6:2.80:13,3,0	1/1:1,2:3:5.79:39,6,0	0/1:5,2:6:0.60:52,0,1	0/1:2,3:4:10.42:18,0,10	1/1:1,2:2:3.01:31,3,0	0/0:15,0:15:45.13:0,45,683	1/1:4,2:2:6:51,6,0	1/1:7,5:8:4.70:53,5,0	0/1:5,4:6:9.44:9,0,40	1/1:4,6:8:2.37:8,2,0	1/1:2,6:6:4.74:17,5,0	1/1:1,3:4:3.01:30,3,0	1/1:0,5:5:3.01:30,3,0	0/1:4,4:7:3.84:81,0,4	1/1:0,7:7:11.83:79,12,0	1/1:0,1:1:3.01:32,3,0
chr10	99366405	.	GA	G	1228.70	PASS	AB=0.578;AC=31;AF=0.596;AN=52;BaseQRankSum=4.083;DP=282;FS=6.531;HRun=1;HaplotypeScore=61.2785;InbreedingCoeff=0.4117;MQ=29.93;MQ0=50;MQRankSum=-3.159;QD=8.65;ReadPosRankSum=0.271;VQSLOD=0.6858;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:16:17.15:0,17,198	1/1:2,1:2:1.82:5,2,0	0/0:24,0:2:1.80:0,2,5	0/0:42,0:5:11.47:0,11,108	0/1:2,14:14:0.02:0,0,0	1/1:2,8:7:5.21:35,5,0	0/1:2,3:3:0:0,0,0	0/1:5,5:6:19.66:172,0,20	1/1:3,1:2:2.84:35,3,0	1/1:1,10:10:30.10:381,30,0	0/1:1,5:5:0:0,0,0	0/1:2,5:4:3.76:13,0,4	0/1:1,4:3:0:0,0,0	1/1:1,4:5:2.94:18,3,0	0/0:3,3:5:0:0,0,0	1/1:2,5:4:5.56:37,6,0	0/1:1,6:6:0:0,0,1	0/0:12,0:12:33.83:0,34,372	1/1:2,2:3:9.01:100,9,0	0/0:4,9:10:2.50:0,2,9	0/0:6,5:8:3.01:0,3,48	./.	1/1:3,7:7:2.67:37,3,0	./.	1/1:0,8:8:5.71:36,6,0	1/1:0,9:9:27.09:343,27,0	1/1:3,8:8:9.03:114,9,0	1/1:2,2:2:2.84:38,3,0
chr10	99366415	.	GA	G	4257.36	PASS	AB=0.648;AC=45;AF=0.804;AN=56;BaseQRankSum=2.189;DP=393;FS=16.798;HRun=1;HaplotypeScore=72.7942;InbreedingCoeff=0.4095;MQ=58.23;MQ0=63;MQRankSum=-3.897;QD=13.91;ReadPosRankSum=1.018;VQSLOD=2.7659;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:18:31.55:0,32,409	1/1:1,2:2:4.83:44,5,0	0/0:51,0:11:10.37:0,10,132	0/1:65,0:14:3.42:3,0,204	0/1:1,16:15:0.02:0,0,0	1/1:2,8:7:18.06:240,18,0	1/1:1,5:4:6.02:80,6,0	0/1:4,12:12:4.61:365,0,5	1/1:2,3:2:6.02:80,6,0	1/1:0,13:13:39.11:503,39,0	1/1:2,8:9:15.05:200,15,0	0/1:2,10:8:15.99:211,0,16	1/1:1,6:5:9.03:120,9,0	1/1:1,5:6:6.02:80,6,0	1/1:3,4:6:12.04:153,12,0	1/1:3,5:6:18.06:239,18,0	1/1:1,7:7:15.05:194,15,0	0/0:13,0:13:36.88:0,37,428	1/1:1,8:8:19.59:225,20,0	1/1:3,10:10:3.39:56,3,0	0/1:5,9:10:34:34,0,42	1/1:1,10:9:12.04:154,12,0	1/1:2,15:13:18.06:232,18,0	1/1:1,3:3:3.01:40,3,0	1/1:4,9:11:30.06:340,30,0	1/1:2,11:11:33.09:423,33,0	1/1:2,12:10:9.03:120,9,0	1/1:2,3:3:9.03:120,9,0
chr10	99366962	.	AAC	A	2271.03	PASS	AB=0.992;AC=31;AF=0.554;AN=56;BaseQRankSum=7.936;DP=528;FS=5.387;HRun=0;HaplotypeScore=94.9248;InbreedingCoeff=-0.3118;MQ=75.01;MQ0=2;MQRankSum=-0.737;QD=4.95;ReadPosRankSum=10.053;VQSLOD=0.6285;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:64.58:0,65,450	0/1:9,0:9:24.51:40,0,25	0/1:47,0:30:2.07:2,0,684	0/0:25,0:10:22.67:0,23,268	0/1:20,0:19:3.57:103,0,4	0/1:27,0:27:48.52:96,0,49	0/1:15,1:16:37.99:84,0,38	0/1:28,1:29:65.04:65,0,127	1/1:16,0:16:17.92:112,18,0	0/1:23,0:23:8.56:167,0,9	1/1:17,0:17:41.45:183,41,0	0/1:9,0:9:6.29:66,0,6	0/1:8,0:8:5.55:59,0,6	0/1:9,0:9:5.57:45,0,6	0/1:19,0:19:30.85:75,0,31	0/1:13,0:13:31.40:36,0,31	0/1:19,0:19:26.63:119,0,27	0/0:19,0:19:57.04:0,57,944	0/1:20,0:19:36.40:95,0,36	0/1:25,0:25:24.40:198,0,24	1/1:8,1:9:16.36:86,16,0	0/1:15,1:16:19.44:82,0,19	0/1:17,0:17:10.64:131,0,11	1/1:16,0:16:30.30:136,30,0	0/1:16,0:16:7.65:66,0,8	1/1:23,0:23:1.51:185,2,0	1/1:26,0:25:2.40:158,2,0	0/1:10,0:10:36.10:46,0,36
chr10	99366963	.	ACC	A	10279.47	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-5.616;DP=525;FS=3.271;HRun=10;HaplotypeScore=69.3404;InbreedingCoeff=0.8481;MQ=74.31;MQ0=2;MQRankSum=-0.605;QD=22.54;ReadPosRankSum=4.308;VQSLOD=4.4084;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:25:37.92:0,38,143	1/1:2,7:9:21.05:234,21,0	0/1:46,0:29:7.89:8,0,544	0/0:24,0:10:15.80:0,16,157	1/1:2,17:20:54.08:575,54,0	1/1:4,23:27:48.11:535,48,0	1/1:4,12:16:33.09:368,33,0	1/1:9,19:28:54.08:572,54,0	1/1:0,15:16:32.96:348,33,0	1/1:3,20:23:55.69:629,56,0	1/1:0,17:17:51.14:564,51,0	1/1:1,8:9:21.05:234,21,0	1/1:1,7:8:18.04:201,18,0	1/1:1,8:9:21.05:234,21,0	1/1:3,16:19:42.10:468,42,0	1/1:2,11:13:21.05:234,21,0	1/1:3,16:19:45.11:501,45,0	0/0:18,0:19:50.62:0,51,716	1/1:4,15:19:45.03:473,45,0	1/1:2,22:24:63.14:698,63,0	1/1:1,8:9:21.06:233,21,0	1/1:3,13:16:33.09:367,33,0	1/1:3,14:17:42.10:466,42,0	1/1:0,16:16:36.10:399,36,0	1/1:2,14:16:33.09:367,33,0	1/1:2,21:23:60.16:667,60,0	1/1:2,24:26:60.16:667,60,0	1/1:3,7:10:21.04:234,21,0
chr10	99367053	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTT	C	817.53	PASS	AB=0.833;AC=18;AF=0.375;AN=48;BaseQRankSum=0.854;DP=356;FS=17.946;HRun=0;HaplotypeScore=210.3143;InbreedingCoeff=0.3767;MQ=50.20;MQ0=26;MQRankSum=-0.430;QD=6.24;ReadPosRankSum=1.277;VQSLOD=1.6641;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:27:34.50:0,34,3018	0/0:4,0:4:1.55:0,2,4	0/0:12,0:7:0.47:0,0,1	0/0:9,0:3:0:0,0,0	1/1:12,0:12:3.01:60,3,0	1/1:17,0:17:3:72,3,0	1/1:11,0:10:3.01:40,3,0	0/0:25,0:23:21.30:0,21,521	0/0:7,0:7:0.47:0,0,1	0/0:10,0:9:2.04:0,2,6	1/1:19,0:19:2.99:25,3,0	./.	1/1:5,1:5:3.01:245,3,0	1/1:8,0:7:3.01:44,3,0	./.	0/1:12,0:12:37.41:61,0,37	0/0:12,0:10:3.01:0,3,299	0/0:26,0:25:56:0,56,4407	0/0:3,0:3:1.25:0,1,3	1/1:13,0:11:2.24:104,2,0	0/0:13,0:12:0.47:0,0,1	./.	0/0:11,0:11:2.98:0,3,21	1/1:9,0:8:3.01:57,3,0	./.	0/0:12,0:11:24.71:0,25,1169	0/1:12,12:24:3.20:239,0,3	0/0:17,0:14:18.29:0,18,355
chr10	99367083	.	CTT	C	3857.58	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=1.872;DP=364;FS=0.735;HRun=3;HaplotypeScore=59.2952;InbreedingCoeff=0.2084;MQ=59.98;MQ0=33;MQRankSum=-1.269;QD=11.58;ReadPosRankSum=1.026;VQSLOD=0.4756;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:24:49.82:50,0,240	1/1:5,0:5:14.87:111,15,0	0/0:28,0:9:0.12:0,0,84	0/1:49,0:15:2.19:2,0,100	1/1:4,6:10:8.93:66,9,0	1/1:9,0:8:14.98:124,15,0	1/1:9,0:9:17.82:130,18,0	1/1:12,0:11:32.97:291,33,0	1/1:8,0:8:23.84:181,24,0	1/1:2,6:7:14.91:114,15,0	1/1:16,0:16:35.21:291,35,0	1/1:4,0:4:11.83:80,12,0	1/1:7,0:6:17.89:138,18,0	1/1:5,0:4:11.86:84,12,0	1/1:12,0:12:32.83:257,33,0	1/1:9,0:9:20.79:158,21,0	1/1:12,0:10:29.85:229,30,0	0/1:26,0:25:99:127,0,245	1/1:6,0:5:12.01:111,12,0	1/1:2,4:4:2.94:18,3,0	1/1:13,0:13:26.82:212,27,0	1/1:8,0:7:20.90:167,21,0	1/1:12,0:11:23.43:182,23,0	1/1:15,0:14:17.83:145,18,0	1/1:6,0:5:11.88:87,12,0	1/1:14,0:13:37.81:326,38,0	1/1:12,0:12:2.71:17,3,0	1/1:13,0:10:20.60:162,21,0
chr10	99367504	.	ATATG	A	9892.98	PASS	AB=1.000;AC=47;AF=0.870;AN=54;BaseQRankSum=2.381;DP=276;FS=7.817;HRun=0;HaplotypeScore=79.4540;InbreedingCoeff=0.7063;MQ=60.36;MQ0=2;MQRankSum=-1.822;QD=41.05;ReadPosRankSum=0.146;VQSLOD=4.7189;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:15.03:0,15,230	1/1:0,5:5:12.03:207,12,0	0/1:8,0:7:1.72:2,0,21	0/0:10,0:5:0.40:0,0,1	1/1:1,11:12:33.10:598,33,0	1/1:3,18:21:48.15:919,48,0	1/1:0,4:4:6.02:120,6,0	1/1:2,32:26:66.10:1002,66,0	1/1:1,8:9:27.08:485,27,0	1/1:4,10:14:36.21:699,36,0	1/1:1,9:10:24.06:466,24,0	1/1:5,4:9:27.06:442,27,0	1/1:1,6:7:21.06:374,21,0	1/1:3,1:4:12.02:147,12,0	1/1:3,3:6:18.02:232,18,0	1/1:2,2:4:12.01:147,12,0	1/1:1,7:8:24.08:439,24,0	0/0:12,0:12:36.12:0,36,991	1/1:5,5:10:29.97:441,30,0	1/1:2,7:9:15.05:277,15,0	1/1:3,2:5:9.03:156,9,0	./.	1/1:6,2:8:21.03:302,21,0	1/1:0,2:2:3.01:60,3,0	1/1:4,7:11:27.05:394,27,0	1/1:5,12:17:51.14:856,51,0	1/1:3,10:13:35.93:590,36,0	1/1:3,8:11:30.09:539,30,0
chr10	99367506	.	A	ATATATG	393.96	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=-4.607;DP=272;FS=2.190;HRun=0;HaplotypeScore=124.1683;InbreedingCoeff=0.1397;MQ=60.34;MQ0=2;MQRankSum=-0.107;QD=8.95;ReadPosRankSum=-2.542;VQSLOD=2.3194;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,8:11:12.04:436,12,0	0/0:5,0:5:11.99:0,12,143	0/0:7,0:7:12.31:0,12,103	0/0:11,0:5:3.46:0,3,24	0/0:12,0:12:32.99:0,33,415	0/0:19,0:19:47.79:0,48,574	0/0:4,0:4:6.02:0,6,84	0/0:33,0:25:25.22:0,25,459	0/0:9,0:9:24.16:0,24,284	0/0:14,0:14:34.22:0,34,435	0/0:9,0:9:22.63:0,23,297	0/1:10,0:10:36.53:37,0,147	0/0:7,0:7:19.86:0,20,239	0/1:4,0:4:15.15:15,0,26	0/0:6,0:6:17.94:0,18,174	0/0:4,0:4:11.94:0,12,108	0/1:8,0:8:6.44:6,0,223	0/0:12,0:12:36.12:0,36,876	0/1:11,0:11:20.08:20,0,218	0/0:9,0:9:20.92:0,21,227	0/0:5,0:5:8.94:0,9,101	0/0:3,0:3:2.99:0,3,24	0/0:6,0:6:17.86:0,18,153	0/0:2,0:2:3.01:0,3,42	0/0:10,0:10:24.06:0,24,225	0/0:17,0:17:43.61:0,44,538	0/0:12,0:12:35.78:0,36,350	0/0:11,0:11:6.06:0,6,295
chr10	99367569	.	CAT	C	9717.26	PASS	AB=0.923;AC=51;AF=0.911;AN=56;BaseQRankSum=4.547;DP=374;FS=0.000;HRun=0;HaplotypeScore=139.0345;InbreedingCoeff=0.7103;MQ=61.33;MQ0=2;MQRankSum=-2.822;QD=27.30;ReadPosRankSum=2.070;VQSLOD=6.0848;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:18.03:0,18,277	1/1:3,4:7:9.03:114,9,0	1/1:3,0:3:0.80:2,1,0	0/1:10,1:8:1.09:30,0,1	1/1:4,13:17:30.10:381,30,0	1/1:6,13:19:21.07:267,21,0	1/1:0,9:9:24.08:305,24,0	1/1:14,19:33:68.06:808,68,0	1/1:3,18:21:57.13:699,57,0	1/1:5,20:25:74.88:866,75,0	1/1:3,14:17:36.12:458,36,0	1/1:1,9:10:24.08:304,24,0	1/1:1,11:12:33.11:418,33,0	1/1:1,8:9:24.04:287,24,0	1/1:1,9:10:15.05:190,15,0	1/1:3,8:11:27.07:329,27,0	1/1:5,8:13:29.91:343,30,0	0/0:11,0:10:27.06:0,27,421	1/1:6,12:17:34.53:453,35,0	1/1:1,9:10:24.08:305,24,0	1/1:2,6:8:21.05:252,21,0	1/1:0,3:3:9.03:114,9,0	1/1:0,10:9:21.07:267,21,0	1/1:0,2:2:3.01:38,3,0	1/1:4,13:17:45.13:558,45,0	1/1:4,19:23:64.13:784,64,0	1/1:3,27:30:72.23:916,72,0	1/1:1,6:7:18.06:228,18,0
chr10	99367627	.	G	GAT	10817.06	PASS	AC=46;AF=0.852;AN=54;BaseQRankSum=-1.574;DP=350;FS=5.032;HRun=0;HaplotypeScore=88.4883;InbreedingCoeff=0.7180;MQ=61.40;MQ0=4;MQRankSum=-1.328;QD=34.78;ReadPosRankSum=0.807;VQSLOD=6.7593;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:18.04:0,18,218	1/1:1,3:4:6.02:102,6,0	0/0:6,0:4:3.01:0,3,39	0/0:12,0:7:0.94:0,1,2	1/1:3,15:18:42.14:708,42,0	1/1:3,20:22:54.18:911,54,0	1/1:4,0:4:9.02:122,9,0	1/1:8,36:41:99:1685,105,0	1/1:7,8:15:21.07:357,21,0	1/1:6,20:26:57.19:949,57,0	1/1:4,11:15:33.10:534,33,0	1/1:3,8:11:21.07:357,21,0	1/1:3,4:7:9.03:153,9,0	1/1:2,5:7:12.04:203,12,0	1/1:2,4:6:12.04:204,12,0	1/1:1,9:10:21.07:357,21,0	1/1:6,14:20:48.16:808,48,0	0/0:9,0:9:27.03:0,27,317	1/1:4,10:14:33.11:561,33,0	1/1:4,4:8:9.03:153,9,0	1/1:2,2:4:9.01:126,9,0	./.	1/1:4,5:8:9.03:153,9,0	1/1:2,0:2:3.01:45,3,0	1/1:2,10:12:27.09:459,27,0	1/1:3,18:21:57.19:953,57,0	1/1:8,13:21:36.12:612,36,0	1/1:1,7:8:18.06:305,18,0
chr10	99367777	.	A	AAT	11443.83	PASS	AB=0.692;AC=45;AF=0.833;AN=54;BaseQRankSum=-4.374;DP=346;FS=0.000;HRun=0;HaplotypeScore=55.1482;InbreedingCoeff=0.4537;MQ=56.38;MQ0=5;MQRankSum=0.952;QD=36.56;ReadPosRankSum=-0.794;VQSLOD=6.4328;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:18.06:0,18,235	1/1:0,2:2:3.01:51,3,0	./.	0/0:2,0:1:0:0,0,0	1/1:3,6:9:21.05:311,21,0	1/1:4,9:13:33.10:521,33,0	0/1:5,4:9:16.45:253,0,16	1/1:16,49:67:99:2385,153,0	1/1:1,12:13:21.07:360,21,0	1/1:2,13:15:39.13:657,39,0	1/1:2,7:9:24.08:406,24,0	1/1:6,0:6:12.03:169,12,0	1/1:8,3:11:21.07:340,21,0	1/1:6,4:9:18.05:263,18,0	1/1:6,1:7:9:105,9,0	1/1:1,9:10:27.07:434,27,0	1/1:7,11:18:42.05:627,42,0	0/0:19,0:19:39.13:0,39,512	1/1:6,8:13:30.07:478,30,0	1/1:3,8:11:33.11:540,33,0	0/1:6,2:8:3.65:176,0,4	1/1:0,1:1:3.01:51,3,0	0/1:2,5:7:25.50:188,0,26	1/1:3,5:7:15.05:253,15,0	1/1:6,4:10:24.08:385,24,0	1/1:8,11:19:54.05:791,54,0	1/1:6,14:20:57.19:945,57,0	1/1:7,9:16:45.15:753,45,0
chr10	99367799	.	G	GT	83.44	PASS	AB=0.801;AC=3;AF=0.056;AN=54;BaseQRankSum=-1.612;DP=299;FS=11.694;HRun=1;HaplotypeScore=88.2003;InbreedingCoeff=-0.0827;MQ=56.35;MQ0=0;MQRankSum=-1.481;QD=4.17;ReadPosRankSum=1.563;VQSLOD=-0.6858;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:24.08:0,24,335	0/0:2,0:2:6.02:0,6,84	./.	0/0:2,0:1:3.01:0,3,35	0/0:9,0:9:24.08:0,24,336	0/0:15,0:15:45.15:0,45,628	0/1:4,2:6:77.79:78,0,150	0/0:52,0:52:99:0,157,2181	0/0:8,0:8:24.08:0,24,335	0/0:13,0:13:36.12:0,36,503	0/0:7,0:7:18.06:0,18,252	0/0:3,0:3:9.03:0,9,126	0/0:5,0:5:15.05:0,15,209	0/0:9,0:9:27.09:0,27,378	0/0:6,0:6:15.05:0,15,209	0/0:8,0:8:24.08:0,24,335	0/0:17,0:17:48.13:0,48,649	0/0:20,0:20:57.16:0,57,776	0/0:18,1:19:54.14:0,54,733	0/0:11,0:11:30.10:0,30,419	0/1:6,1:7:29.85:30,0,192	0/0:2,0:2:3.01:0,3,42	0/1:5,2:7:74.67:75,0,172	0/0:5,0:5:15.05:0,15,210	0/0:5,0:5:15.05:0,15,209	0/0:16,0:16:48.16:0,48,670	0/0:21,0:21:63.21:0,63,876	0/0:13,0:13:39.13:0,39,545
chr10	99367842	.	C	CAT	7770.26	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.711;DP=321;FS=0.904;HRun=0;HaplotypeScore=70.8239;InbreedingCoeff=0.7521;MQ=61.08;MQ0=1;MQRankSum=0.797;QD=27.36;ReadPosRankSum=-0.137;VQSLOD=5.5275;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,9:11:20.10:324,20,0	1/1:2,0:2:6:57,6,0	0/0:12,0:4:5.89:0,6,39	0/0:6,0:3:6:0,6,56	1/1:13,0:12:21.06:237,21,0	1/1:14,0:14:33.08:377,33,0	1/1:3,0:3:9.01:89,9,0	1/1:42,0:42:99:1104,114,0	1/1:7,0:7:21.06:238,21,0	1/1:10,0:10:27.06:302,27,0	1/1:10,0:10:20.93:240,21,0	1/1:5,0:5:15.04:173,15,0	1/1:9,0:9:21.06:244,21,0	1/1:8,0:8:21.06:243,21,0	1/1:8,0:8:21.06:262,21,0	1/1:9,0:8:15.03:156,15,0	1/1:14,0:14:30.05:328,30,0	0/0:18,0:19:19.17:0,19,532	1/1:22,0:22:40.86:502,41,0	1/1:11,0:11:30.06:340,30,0	1/1:14,0:14:36.10:397,36,0	1/1:2,0:2:6.02:75,6,0	1/1:5,0:5:12:116,12,0	1/1:3,0:3:3.01:33,3,0	1/1:11,0:11:33.08:369,33,0	1/1:21,0:21:63.11:683,63,0	1/1:15,0:15:39.09:428,39,0	1/1:14,0:14:39.08:455,39,0
chr10	99367843	.	A	ATG	13371.70	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-4.135;DP=321;FS=3.095;HRun=0;HaplotypeScore=48.4021;InbreedingCoeff=0.7802;MQ=59.64;MQ0=1;MQRankSum=-0.127;QD=46.75;ReadPosRankSum=0.253;VQSLOD=5.8140;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:18.03:181,18,0	1/1:1,1:2:6.02:106,6,0	0/0:12,0:4:8.91:0,9,87	0/0:5,0:2:6.02:0,6,86	1/1:2,11:12:23.96:429,24,0	1/1:2,13:15:33.11:627,33,0	1/1:3,1:4:9.03:165,9,0	1/1:0,41:41:99:2154,123,0	1/1:0,7:7:21.07:406,21,0	1/1:3,8:11:30.09:542,30,0	1/1:2,9:11:20.96:396,21,0	1/1:0,5:5:15.05:289,15,0	1/1:0,9:9:21.07:405,21,0	1/1:0,7:7:21.07:405,21,0	1/1:0,8:9:21.07:404,21,0	1/1:4,4:7:21.04:331,21,0	1/1:5,9:14:33.10:582,33,0	0/0:18,0:18:40.57:0,41,658	1/1:7,14:21:30.91:958,31,0	1/1:3,9:12:30.10:559,30,0	1/1:1,13:14:36.12:695,36,0	1/1:0,2:2:6.02:116,6,0	1/1:4,2:5:15.03:238,15,0	1/1:1,1:2:3.01:58,3,0	1/1:1,10:11:33.11:629,33,0	1/1:1,21:22:66.23:1219,66,0	1/1:2,13:16:39.13:744,39,0	1/1:1,13:14:39.13:733,39,0
chr10	99368813	.	TGG	T	2797.91	PASS	AB=0.932;AC=42;AF=0.778;AN=54;BaseQRankSum=-1.196;DP=390;FS=34.016;HRun=13;HaplotypeScore=63.3719;InbreedingCoeff=0.7206;MQ=82.26;MQ0=1;MQRankSum=0.532;QD=9.52;ReadPosRankSum=5.982;VQSLOD=-0.2035;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:15.48:0,15,157	1/1:5,0:5:2.66:11,3,0	0/0:23,0:21:26.16:0,26,232	0/0:22,0:20:14.43:0,14,190	1/1:12,7:21:20.91:169,21,0	1/1:5,13:19:32.77:302,33,0	1/1:7,6:16:23.22:181,23,0	0/1:11,0:12:0.08:0,0,0	1/1:6,6:12:17.84:174,18,0	1/1:9,7:17:14.63:116,15,0	1/1:5,1:8:5.75:40,6,0	1/1:4,2:8:8.43:52,8,0	1/1:1,5:7:11.76:99,12,0	1/1:4,6:10:18.01:173,18,0	1/1:6,7:15:23.50:198,23,0	1/1:4,7:11:18.01:174,18,0	1/1:5,7:13:20.51:169,21,0	0/0:21,0:21:32.45:0,32,302	1/1:13,2:18:23.40:186,23,0	1/1:5,1:8:8.48:53,8,0	1/1:10,1:15:11.84:82,12,0	1/1:10,8:22:40.94:335,41,0	1/1:8,6:14:12.34:117,12,0	1/1:5,8:13:11.90:115,12,0	1/1:8,3:11:14.55:109,15,0	0/0:3,0:3:3.01:0,3,43	0/1:16,2:19:5.86:109,0,6	./.
chr10	99369453	.	GCTCT	G	101.91	PASS	AB=1.000;AC=3;AF=0.056;AN=54;BaseQRankSum=-2.370;DP=648;FS=2.262;HRun=0;HaplotypeScore=150.9694;InbreedingCoeff=0.6174;MQ=74.84;MQ0=14;MQRankSum=-1.636;QD=2.17;ReadPosRankSum=0.102;VQSLOD=2.7542;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,9:24:12.04:187,12,0	0/0:10,0:10:18.06:0,18,279	./.	0/0:42,0:24:0.47:0,0,1	0/0:28,0:28:40.98:0,41,675	0/0:23,0:23:24.08:0,24,387	0/0:26,0:26:24.97:0,25,377	0/0:29,0:26:15.05:0,15,245	0/0:26,0:26:30.10:0,30,480	0/0:20,0:20:42.11:0,42,594	0/0:23,0:22:21.07:0,21,343	0/0:20,0:19:21.06:0,21,310	0/0:18,0:17:18.06:0,18,310	0/0:13,0:13:15.05:0,15,236	0/0:23,0:23:27.09:0,27,426	0/0:19,0:19:30.10:0,30,473	0/0:25,0:25:39.13:0,39,612	0/0:19,0:20:38.52:0,39,643	0/0:15,0:14:9.03:0,9,141	0/0:33,0:33:42.08:0,42,657	0/0:16,0:15:15.05:0,15,230	0/0:23,0:23:24.08:0,24,374	0/0:30,0:30:26.99:0,27,407	0/0:32,0:32:48.16:0,48,745	0/0:24,0:24:27.08:0,27,402	0/1:23,0:21:1.66:2,0,571	0/0:20,0:19:27.09:0,27,440	0/0:10,0:8:7.84:0,8,108
chr10	99369482	.	C	CTT	11006.78	PASS	AB=0.689;AC=41;AF=0.732;AN=56;BaseQRankSum=0.148;DP=656;FS=7.097;HRun=1;HaplotypeScore=94.7963;InbreedingCoeff=0.3342;MQ=62.76;MQ0=23;MQRankSum=3.499;QD=20.35;ReadPosRankSum=5.250;VQSLOD=2.7132;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:50.41:0,50,382	1/1:2,9:11:3.91:227,4,0	0/0:25,0:7:11.66:0,12,69	0/0:45,0:14:9.73:0,10,103	0/1:11,19:30:53.89:596,0,54	1/1:2,16:18:15.94:361,16,0	1/1:3,23:27:29.91:485,30,0	0/1:37,0:34:21.23:461,0,21	1/1:4,24:29:18.12:461,18,0	1/1:4,15:22:38.91:646,39,0	1/1:5,18:22:13.66:420,14,0	0/1:5,19:22:34.83:206,0,35	0/1:5,17:21:26.23:208,0,26	1/1:0,18:19:15.05:284,15,0	1/1:2,17:19:27.09:478,27,0	1/1:2,17:19:29.64:565,30,0	1/1:2,21:23:40.95:737,41,0	0/0:16,0:16:47.89:0,48,464	1/1:3,10:10:29.58:321,30,0	1/1:2,24:25:68.83:922,69,0	0/1:4,15:19:8.91:211,0,9	1/1:2,17:19:22.32:524,22,0	1/1:4,18:22:1.42:388,1,0	1/1:4,30:35:40.03:832,40,0	1/1:1,19:20:18.04:440,18,0	1/1:4,21:23:58.12:839,58,0	0/1:4,24:27:7.91:364,0,8	0/1:8,0:5:1.14:29,0,1
chr10	99369493	.	T	TCG	10963.29	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-1.125;DP=645;FS=11.436;HRun=0;HaplotypeScore=98.6844;InbreedingCoeff=0.5098;MQ=63.27;MQ0=18;MQRankSum=4.837;QD=20.76;ReadPosRankSum=1.596;VQSLOD=5.0032;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:41.89:0,42,334	0/1:11,0:11:25.01:199,0,25	0/0:31,0:12:20.17:0,20,193	0/0:44,0:14:0.31:0,0,98	1/1:27,1:27:6.30:543,6,0	1/1:19,1:20:28.85:470,29,0	1/1:24,0:24:29.73:447,30,0	1/1:38,0:35:43.96:643,44,0	1/1:25,1:26:18.02:502,18,0	1/1:23,1:24:62.30:706,62,0	1/1:20,0:18:13.56:311,14,0	0/1:22,0:21:28.82:197,0,29	0/1:18,0:17:53.31:183,0,53	1/1:23,0:23:26.93:331,27,0	1/1:18,1:19:33.03:489,33,0	1/1:17,0:17:32.80:514,33,0	1/1:18,0:18:39.60:638,40,0	0/0:17,0:17:50.90:0,51,489	1/1:13,0:10:29.67:307,30,0	1/1:29,0:28:74.46:834,74,0	1/1:18,0:18:9.01:249,9,0	1/1:17,0:17:41.44:486,41,0	1/1:21,0:21:28.68:453,29,0	1/1:34,0:34:40.96:775,41,0	1/1:17,0:17:24.08:401,24,0	1/1:34,0:32:76.03:883,76,0	1/1:32,0:31:7.75:390,8,0	1/1:5,0:2:0.02:14,0,0
chr10	99370962	.	AG	A	4964.16	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=10.428;DP=386;FS=57.799;HRun=5;HaplotypeScore=148.1357;InbreedingCoeff=0.9297;MQ=62.39;MQ0=0;MQRankSum=-11.028;QD=18.45;ReadPosRankSum=0.364;VQSLOD=0.4779;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,8:19:20.55:179,21,0	1/1:3,4:7:17.29:139,17,0	0/0:16,0:14:29.72:0,30,356	0/0:35,0:34:54.93:0,55,964	1/1:7,12:19:37.60:288,38,0	1/1:6,5:11:29.28:243,29,0	1/1:2,6:8:18.03:193,18,0	0/0:19,0:19:51.16:0,51,685	1/1:5,2:7:17.45:127,17,0	1/1:4,16:20:41.98:456,42,0	1/1:3,12:15:37.80:310,38,0	1/1:6,3:9:17.75:166,18,0	1/1:4,1:5:11.57:78,12,0	1/1:7,7:14:32.25:249,32,0	1/1:3,7:10:29.75:301,30,0	1/1:3,2:5:11.73:91,12,0	1/1:6,2:8:14.52:102,15,0	0/0:18,0:18:50.94:0,51,653	1/1:3,12:15:36.08:397,36,0	1/1:5,12:17:45.86:333,46,0	1/1:0,5:5:2.96:19,3,0	1/1:9,15:24:59.23:421,59,0	1/1:3,13:16:42.82:248,43,0	1/1:4,5:9:9.03:102,9,0	1/1:6,9:15:35.31:265,35,0	0/0:15,0:15:39.13:0,39,533	1/1:6,5:11:26.76:259,27,0	0/0:14,0:14:38.93:0,39,474
chr10	99370966	.	G	GAAAGA	9031.39	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=10.655;DP=378;FS=58.090;HRun=0;HaplotypeScore=151.1219;InbreedingCoeff=0.9318;MQ=68.59;MQ0=0;MQRankSum=-11.948;QD=35.84;ReadPosRankSum=0.576;VQSLOD=2.6408;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,8:16:21.07:429,21,0	1/1:4,2:6:17.72:280,18,0	0/0:22,0:20:37.01:0,37,646	0/0:34,0:33:54.62:0,55,1497	1/1:13,5:18:38.58:534,39,0	1/1:6,5:11:30.09:593,30,0	1/1:6,1:7:18.05:216,18,0	0/0:20,0:20:54.16:0,54,1139	1/1:2,5:7:18.06:408,18,0	1/1:17,1:18:42.12:551,42,0	1/1:12,2:14:38.70:428,39,0	1/1:4,5:9:18.06:345,18,0	1/1:1,4:5:12.04:288,12,0	1/1:7,5:12:33.05:664,33,0	1/1:7,3:10:30.09:480,30,0	1/1:3,2:5:12.03:231,12,0	1/1:3,5:8:15.03:333,15,0	0/0:20,0:20:35.79:0,36,1067	1/1:13,1:14:36.08:397,36,0	1/1:12,5:17:47.75:626,48,0	1/1:5,0:5:2.96:19,3,0	1/1:17,6:23:61.69:728,62,0	1/1:13,3:16:43.71:424,44,0	1/1:5,3:8:9.03:182,9,0	1/1:11,3:14:35.82:475,36,0	0/0:13,0:13:39.13:0,39,907	1/1:7,2:9:27.07:399,27,0	0/0:17,0:17:39.12:0,39,839
chr10	99370969	.	A	AGGACAAAAAGG	22960.52	PASS	AB=0.826;AC=30;AF=0.556;AN=54;BaseQRankSum=13.348;DP=455;FS=26.449;HRun=0;HaplotypeScore=280.3538;InbreedingCoeff=0.1419;MQ=71.95;MQ0=0;MQRankSum=-12.258;QD=73.12;ReadPosRankSum=5.713;VQSLOD=3.4453;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,8:21:20.27:1132,20,0	0/1:8,2:10:11.58:986,0,12	0/0:22,0:22:45.34:0,45,1058	0/0:40,0:37:40.32:0,40,2340	0/1:16,5:21:25.15:724,0,25	0/1:8,5:13:1.27:1005,0,1	0/1:8,1:9:17.36:406,0,17	0/0:21,0:21:63.17:0,63,1897	1/1:6,5:11:27.09:1273,27,0	1/1:21,1:22:36.05:2135,36,0	0/1:20,2:22:5.64:1403,0,6	1/1:5,5:10:14.44:515,14,0	1/1:4,4:8:18.06:896,18,0	0/1:10,5:15:9.78:1486,0,10	0/1:11,3:14:26.59:903,0,27	1/1:8,2:10:25.33:1002,25,0	1/1:5,5:10:15.05:621,15,0	0/0:19,0:19:54.15:0,54,1793	0/1:14,1:15:83.62:638,0,84	0/1:17,5:22:27.41:1809,0,27	./.	0/1:17,6:23:23.55:1760,0,24	1/1:16,3:19:8.80:1337,9,0	0/1:8,3:11:17.99:464,0,18	0/1:12,3:15:5.20:1189,0,5	0/0:14,0:14:42.13:0,42,1477	1/1:11,2:13:4.95:1277,5,0	0/0:18,0:18:42.13:0,42,1407
chr10	99371014	.	G	GGT	1596.65	PASS	AB=0.781;AC=34;AF=0.654;AN=52;BaseQRankSum=9.656;DP=401;FS=3.979;HRun=0;HaplotypeScore=97.8970;InbreedingCoeff=0.4009;MQ=55.12;MQ0=16;MQRankSum=-5.225;QD=6.94;ReadPosRankSum=1.935;VQSLOD=2.9640;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,1:6:7.26:75,7,0	1/1:8,3:10:0.80:158,1,0	0/0:30,0:17:31.96:0,32,594	0/0:48,0:19:31.31:0,31,449	./.	1/1:9,0:8:1.71:4,2,0	1/1:6,1:6:3.97:41,4,0	0/0:18,0:17:48.26:0,48,587	1/1:15,3:18:0.27:183,0,0	0/1:18,2:16:65.55:66,0,298	1/1:11,2:11:8.72:99,9,0	1/1:8,2:13:13.12:123,13,0	0/1:11,0:14:26.80:73,0,27	1/1:14,0:17:12.75:129,13,0	1/1:16,2:19:14.91:167,15,0	1/1:4,2:7:2.32:163,2,0	0/1:1,1:3:18.08:35,0,18	0/0:18,0:18:48.52:0,49,524	0/0:17,0:15:32.50:0,33,303	1/1:17,1:18:8.82:104,9,0	./.	1/1:16,1:16:2.82:17,3,0	1/1:7,2:10:9.72:110,10,0	1/1:1,0:2:1.91:6,2,0	1/1:5,1:6:3.01:38,3,0	0/0:18,0:15:38.55:0,39,411	0/1:11,3:13:26.72:177,0,27	0/0:7,0:7:10.85:0,11,139
chr10	99371016	.	G	GGT	433.83	PASS	AB=0.869;AC=31;AF=0.596;AN=52;BaseQRankSum=8.971;DP=403;FS=5.587;HRun=0;HaplotypeScore=103.6398;InbreedingCoeff=0.3548;MQ=53.38;MQ0=16;MQRankSum=-5.529;QD=2.07;ReadPosRankSum=-0.576;VQSLOD=1.6858;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:6:6.59:25,7,0	0/1:9,2:10:8.84:70,0,9	0/0:29,0:16:42.13:0,42,643	0/0:47,0:18:34.32:0,34,422	./.	1/1:10,0:8:1.71:4,2,0	1/1:6,1:6:3.83:18,4,0	0/0:21,0:20:48.26:0,48,570	1/1:16,2:18:0.21:75,0,0	0/0:20,1:17:9.77:0,10,359	1/1:11,2:11:2.41:12,2,0	1/1:12,2:13:8.87:41,9,0	0/1:15,0:14:32.76:46,0,33	1/1:17,0:17:5.79:24,6,0	1/1:19,2:19:11.13:55,11,0	0/1:6,1:7:9.15:47,0,9	0/1:2,1:3:18.07:24,0,18	0/0:18,0:18:46.23:0,46,491	0/0:16,0:14:31.24:0,31,371	1/1:17,1:18:3.61:16,4,0	./.	1/1:16,1:16:0.78:2,1,0	1/1:8,2:10:8.43:37,8,0	1/1:2,0:2:1.91:6,2,0	1/1:5,1:6:2.88:15,3,0	0/0:19,0:16:38.64:0,39,409	0/1:12,2:13:27.57:84,0,28	0/0:7,0:7:11.25:0,11,142
chr10	99371047	.	A	AG	1558.27	PASS	AB=0.776;AC=32;AF=0.762;AN=42;BaseQRankSum=1.504;DP=223;FS=21.877;HRun=1;HaplotypeScore=61.1908;InbreedingCoeff=0.2793;MQ=40.39;MQ0=21;MQRankSum=-0.830;QD=10.12;ReadPosRankSum=-1.457;VQSLOD=-0.2596;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:0,3:2:0.47:0,0,1	1/1:2,5:7:9.38:71,9,0	./.	0/0:22,0:5:11.07:0,11,97	0/1:3,3:5:0.03:0,0,0	0/1:1,7:6:0.01:0,0,0	0/0:1,4:4:0.47:0,0,1	0/1:21,0:19:99:129,0,109	1/1:0,7:7:5.92:66,6,0	1/1:5,7:9:18.06:259,18,0	./.	1/1:2,12:12:7.37:81,7,0	1/1:1,5:5:2.95:27,3,0	1/1:0,4:4:0.47:1,0,0	./.	1/1:1,2:3:6.02:83,6,0	1/1:0,3:3:9.03:117,9,0	0/1:17,2:19:43.57:44,0,250	1/1:1,1:1:3.01:45,3,0	./.	./.	./.	1/1:1,3:4:0.47:1,0,0	1/1:0,1:1:0.89:2,1,0	./.	1/1:4,19:20:2:477,2,0	1/1:1,5:5:8.77:133,9,0	1/1:8,0:7:11.95:127,12,0
chr10	99371052	.	A	AG	476.26	PASS	AB=0.748;AC=23;AF=0.523;AN=44;BaseQRankSum=5.787;DP=199;FS=7.019;HRun=1;HaplotypeScore=58.2849;InbreedingCoeff=0.4176;MQ=51.82;MQ0=22;MQRankSum=-2.467;QD=5.01;ReadPosRankSum=-1.283;VQSLOD=-0.2799;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,1:2:0.47:0,0,1	0/1:0,1:1:0:0,0,0	0/1:15,0:5:17.59:18,0,72	0/1:34,0:9:9.91:10,0,121	0/1:2,2:4:0.03:0,0,0	0/0:3,4:6:0.09:0,0,1	0/0:3,1:3:0.47:0,0,1	0/0:27,0:25:65.58:0,66,740	1/1:0,6:6:4.90:53,5,0	1/1:8,1:6:12.04:162,12,0	./.	1/1:4,4:6:3.84:21,4,0	0/0:2,2:3:0:0,0,0	0/1:1,2:3:0:0,0,0	./.	1/1:2,1:3:6.02:78,6,0	1/1:0,3:3:9.01:97,9,0	0/0:17,0:17:47.75:0,48,630	1/1:1,1:1:3:29,3,0	./.	./.	./.	1/1:0,2:2:0.47:1,0,0	1/1:0,1:1:0.89:2,1,0	./.	0/0:18,0:15:38.70:0,39,442	1/1:1,2:3:9.03:129,9,0	0/0:6,0:5:8.93:0,9,69
chr10	99371057	.	A	AG	249.18	PASS	AB=0.750;AC=16;AF=0.500;AN=32;BaseQRankSum=5.683;DP=188;FS=4.731;HRun=1;HaplotypeScore=73.6957;InbreedingCoeff=0.5887;MQ=62.71;MQ0=19;MQRankSum=-1.812;QD=8.31;ReadPosRankSum=-2.416;VQSLOD=0.1777;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/1:0,1:1:0:0,0,0	0/0:21,1:9:11.67:0,12,166	0/0:44,0:12:7.75:0,8,181	0/1:3,0:3:0.03:0,0,0	0/0:1,3:4:0.14:0,0,1	1/1:1,1:2:3.01:31,3,0	0/0:28,0:26:66.19:0,66,858	1/1:1,3:4:3.01:46,3,0	1/1:4,1:4:6.02:81,6,0	./.	1/1:3,3:5:3.27:14,3,0	./.	./.	./.	1/1:3,1:4:2.32:34,2,0	1/1:0,3:3:8.79:75,9,0	0/0:17,0:17:42.14:0,42,586	./.	./.	./.	./.	./.	./.	./.	0/0:20,0:17:42.13:0,42,553	1/1:1,1:2:6.02:86,6,0	0/0:4,0:3:6:0,6,54
chr10	99371061	.	GA	G	120.32	PASS	AB=0.600;AC=15;AF=0.500;AN=30;BaseQRankSum=5.809;DP=212;FS=4.656;HRun=2;HaplotypeScore=77.8014;InbreedingCoeff=0.5890;MQ=71.45;MQ0=21;MQRankSum=-0.456;QD=4.15;ReadPosRankSum=-2.992;VQSLOD=-0.5467;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:32,0:13:6.83:0,7,256	0/0:54,1:16:4.79:0,5,202	0/1:1,2:3:0.12:0,0,0	0/0:3,1:4:0.89:0,1,2	1/1:2,0:2:3:28,3,0	0/0:28,0:26:71.65:0,72,917	1/1:4,0:4:3:27,3,0	1/1:5,0:4:6.01:58,6,0	./.	1/1:4,2:5:0.47:1,0,0	./.	./.	./.	1/1:3,1:4:5.38:42,5,0	1/1:3,0:3:3.46:25,3,0	0/0:16,0:16:40.95:0,41,589	./.	./.	./.	./.	./.	./.	./.	0/0:22,0:19:51.03:0,51,586	1/1:2,0:2:6:53,6,0	0/0:7,0:6:14.58:0,15,127
chr10	99371062	.	A	AG	229.60	PASS	AB=0.917;AC=18;AF=0.500;AN=36;BaseQRankSum=5.897;DP=228;FS=6.536;HRun=1;HaplotypeScore=83.4289;InbreedingCoeff=0.5160;MQ=73.59;MQ0=21;MQRankSum=-0.077;QD=5.10;ReadPosRankSum=-2.951;VQSLOD=-0.6854;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:34,0:15:5.94:0,6,265	0/0:56,0:17:1.15:0,1,177	0/1:5,0:5:0.03:1,0,0	0/0:4,1:5:0.47:0,0,1	1/1:0,1:1:3.01:46,3,0	0/0:30,0:28:72.21:0,72,931	1/1:2,3:5:3.01:40,3,0	1/1:3,2:4:6.02:94,6,0	0/1:1,0:1:0:0,0,0	1/1:4,2:5:2.04:6,2,0	./.	./.	./.	1/1:1,3:4:2.32:34,2,0	1/1:0,3:3:5.70:41,6,0	0/0:16,0:16:40.95:0,41,551	./.	./.	./.	0/1:5,0:5:0:0,0,0	0/1:4,4:8:0:0,0,0	./.	./.	0/0:25,0:22:51.16:0,51,663	1/1:0,2:2:6.02:81,6,0	0/0:7,0:6:14.99:0,15,154
chr10	99371072	.	A	AG	391.53	PASS	AB=0.712;AC=21;AF=0.500;AN=42;BaseQRankSum=6.360;DP=282;FS=3.910;HRun=1;HaplotypeScore=89.1740;InbreedingCoeff=0.5359;MQ=86.73;MQ0=19;MQRankSum=-2.832;QD=7.99;ReadPosRankSum=-1.881;VQSLOD=0.3244;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,2:2:6.02:84,6,0	0/0:50,0:28:57.99:0,58,660	0/0:70,0:26:0.52:0,1,368	1/1:3,6:9:0.44:2,0,0	0/0:2,4:6:0.47:0,0,1	1/1:0,2:2:3.01:46,3,0	0/0:29,0:28:78.23:0,78,1017	./.	1/1:3,3:5:6.02:94,6,0	0/0:1,2:3:0:0,0,0	1/1:0,3:3:3.01:45,3,0	./.	./.	./.	1/1:1,2:3:6.02:82,6,0	0/1:2,0:2:0:0,0,0	0/0:15,0:15:39.13:0,39,541	1/1:1,1:2:5.97:66,6,0	1/1:0,3:3:5.69:50,6,0	0/0:1,0:1:0:0,0,0	0/1:3,4:7:0:0,0,0	0/1:0,8:8:0.01:0,0,0	./.	./.	0/0:29,0:26:68.25:0,68,876	1/1:0,2:2:3.01:47,3,0	0/0:8,0:7:18.04:0,18,220
chr10	99371076	.	GA	G	275.39	PASS	AB=0.899;AC=20;AF=0.500;AN=40;BaseQRankSum=6.194;DP=283;FS=6.004;HRun=2;HaplotypeScore=84.4152;InbreedingCoeff=0.5904;MQ=90.53;MQ0=18;MQRankSum=-4.518;QD=5.74;ReadPosRankSum=-0.503;VQSLOD=0.3450;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,0:2:6.02:67,6,0	0/0:51,0:30:79.35:0,79,924	0/0:71,0:27:43.76:0,44,519	0/1:7,2:9:0.52:1,0,2	0/0:5,1:6:0.89:0,1,2	1/1:2,0:2:3:29,3,0	0/0:29,0:28:83.69:0,84,1106	./.	1/1:6,0:5:6.01:58,6,0	0/0:3,0:3:0.89:0,1,2	1/1:3,0:3:3.01:32,3,0	./.	./.	./.	1/1:2,1:3:6.02:65,6,0	./.	0/0:15,0:15:36.12:0,36,539	1/1:2,0:2:6:54,6,0	1/1:3,0:3:6.02:67,6,0	0/1:1,0:1:0:0,0,0	0/1:5,2:7:0:0,0,0	0/1:8,0:8:0.03:0,0,0	./.	./.	0/0:28,0:25:66.01:0,66,826	1/1:2,0:2:3.01:30,3,0	0/0:8,0:7:17.64:0,18,206
chr10	99371077	.	A	AG	505.95	PASS	AB=0.583;AC=19;AF=0.475;AN=40;BaseQRankSum=6.414;DP=293;FS=5.471;HRun=1;HaplotypeScore=92.3116;InbreedingCoeff=0.6137;MQ=89.24;MQ0=18;MQRankSum=-4.291;QD=9.03;ReadPosRankSum=-1.318;VQSLOD=0.6854;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,2:3:6.02:85,6,0	0/0:52,0:30:74.65:0,75,839	0/0:71,0:27:44.68:0,45,509	0/1:4,7:11:0.03:1,0,0	0/0:1,5:6:0.47:0,0,1	1/1:1,2:3:5.61:56,6,0	0/0:31,0:30:84.23:0,84,1099	./.	1/1:4,3:6:9.03:139,9,0	0/0:1,3:4:0.47:0,0,1	1/1:1,3:4:3.01:45,3,0	./.	./.	./.	1/1:2,2:4:6.02:82,6,0	./.	0/0:14,0:14:36.12:0,36,503	1/1:0,2:2:6.02:95,6,0	1/1:0,3:3:6.02:88,6,0	0/0:1,1:2:0:0,0,0	0/1:2,5:7:0:0,0,0	0/1:2,8:10:0.01:0,0,0	./.	./.	0/0:27,0:24:66.15:0,66,877	1/1:0,2:2:3.01:47,3,0	0/0:8,0:7:18.04:0,18,222
chr10	99371081	.	GA	G	302.61	PASS	AB=0.701;AC=20;AF=0.500;AN=40;BaseQRankSum=6.510;DP=300;FS=0.875;HRun=2;HaplotypeScore=91.9419;InbreedingCoeff=0.6103;MQ=90.99;MQ0=17;MQRankSum=-3.738;QD=5.22;ReadPosRankSum=-1.170;VQSLOD=0.1399;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,0:3:6.02:67,6,0	0/0:53,0:31:25.47:0,25,881	0/0:72,0:28:47.18:0,47,528	0/1:5,6:11:0.52:1,0,2	0/0:2,4:6:0.89:0,1,2	1/1:2,1:3:5.80:43,6,0	0/0:33,0:33:59.32:0,59,1222	./.	1/1:7,0:6:8.85:72,9,0	0/0:2,2:4:0.89:0,1,2	1/1:3,1:4:3.01:32,3,0	./.	./.	./.	1/1:1,3:4:6.02:67,6,0	./.	0/0:16,0:16:42.12:0,42,601	1/1:2,0:2:6:54,6,0	1/1:1,2:3:6.02:68,6,0	0/1:1,1:2:0:0,0,0	0/1:5,2:7:0:0,0,0	0/1:6,4:10:0.03:0,0,0	./.	./.	0/0:28,0:25:55.81:0,56,864	1/1:2,0:2:3.01:30,3,0	0/0:8,0:7:17.79:0,18,210
chr10	99371082	.	A	AG	552.72	PASS	AB=0.604;AC=20;AF=0.500;AN=40;BaseQRankSum=6.060;DP=304;FS=1.952;HRun=1;HaplotypeScore=91.3357;InbreedingCoeff=0.6171;MQ=91.75;MQ0=17;MQRankSum=-5.233;QD=9.87;ReadPosRankSum=-1.014;VQSLOD=1.0837;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,3:3:6.02:86,6,0	0/0:54,0:32:27.74:0,28,846	0/0:72,0:28:43.85:0,44,474	1/1:6,5:11:0.31:1,0,0	0/0:4,2:6:0.47:0,0,1	1/1:1,2:3:6.02:94,6,0	0/0:36,0:36:42.76:0,43,1132	./.	1/1:3,4:6:9.03:142,9,0	0/0:2,2:4:0.47:0,0,1	1/1:1,3:4:3.01:46,3,0	./.	./.	./.	1/1:3,1:4:6.02:84,6,0	./.	0/0:16,0:16:42.12:0,42,564	1/1:0,2:2:6.02:95,6,0	1/1:2,1:3:6.02:90,6,0	0/0:1,1:2:0:0,0,0	0/1:2,5:7:0:0,0,0	0/1:4,6:10:0.01:0,0,0	./.	./.	0/0:28,0:25:36.10:0,36,875	1/1:0,2:2:3.01:47,3,0	0/0:8,0:7:18.05:0,18,225
chr10	99371097	.	GACGGTTA	G	2971.41	PASS	AC=38;AF=0.731;AN=52;BaseQRankSum=9.142;DP=309;FS=17.637;HRun=0;HaplotypeScore=123.3605;InbreedingCoeff=0.6983;MQ=104.48;MQ0=5;MQRankSum=-9.875;QD=25.84;ReadPosRankSum=-4.065;VQSLOD=1.2357;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:6.02:80,6,0	1/1:0,4:4:12.04:228,12,0	0/0:45,0:38:62.90:0,63,2198	0/0:54,0:30:50.94:0,51,1410	1/1:0,12:12:1.82:53,2,0	1/1:0,8:8:9.03:151,9,0	1/1:0,3:3:9.03:197,9,0	0/0:33,0:33:87.16:0,87,3045	1/1:0,5:5:8.99:100,9,0	1/1:0,6:6:12.04:316,12,0	0/0:0,6:6:0.47:0,0,2	1/1:0,7:7:9.03:157,9,0	./.	1/1:0,5:5:5.93:40,6,0	1/1:0,5:5:6.02:79,6,0	1/1:1,5:6:18.06:315,18,0	1/1:0,1:1:2.97:20,3,0	0/0:10,0:10:27.09:0,27,1005	1/1:0,6:6:18.06:474,18,0	1/1:0,3:3:6.02:157,6,0	1/1:0,4:4:2.91:40,3,0	1/1:1,9:10:11.81:171,12,0	1/1:0,13:13:2.52:78,3,0	./.	1/1:0,9:9:20.98:254,21,0	0/0:32,0:30:84.29:0,84,3345	1/1:0,6:6:9.03:235,9,0	0/0:9,0:9:24.08:0,24,961
chr10	99371139	.	G	GGCAGGTGATGGTA	18382.72	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=0.537;DP=489;FS=42.122;HRun=0;HaplotypeScore=216.9450;InbreedingCoeff=0.8555;MQ=71.06;MQ0=2;MQRankSum=-10.386;QD=55.71;ReadPosRankSum=1.318;VQSLOD=2.5851;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:11.97:373,12,0	1/1:2,3:11:8.75:578,9,0	0/0:30,0:20:32.34:0,32,909	0/0:36,0:24:29.87:0,30,978	1/1:12,5:20:5.87:385,6,0	1/1:11,1:12:12.04:460,12,0	1/1:6,3:11:24.05:1369,24,0	0/0:25,0:25:51.11:0,51,1709	1/1:4,2:10:9.03:552,9,0	1/1:13,5:28:33.03:1030,33,0	1/1:5,1:6:6.02:385,6,0	1/1:5,6:16:21.07:1340,21,0	1/1:5,1:8:12.04:722,12,0	1/1:8,2:19:27.05:1478,27,0	1/1:3,7:14:30.10:1921,30,0	1/1:4,5:10:21.07:1348,21,0	1/1:4,2:9:15.05:964,15,0	0/0:16,0:16:39.12:0,39,1387	1/1:16,0:16:26.98:535,27,0	1/1:8,5:18:15.05:946,15,0	1/1:13,0:14:7.25:111,7,0	1/1:20,1:21:9.93:252,10,0	1/1:15,6:27:8.88:577,9,0	1/1:2,4:10:5.95:211,6,0	1/1:13,5:27:21.07:1327,21,0	0/0:34,0:34:42.14:0,42,1467	1/1:4,5:11:24.08:1519,24,0	0/0:18,0:18:42.11:0,42,1522
chr10	99371145	.	T	TGATGGTAGCAGGG	15888.91	PASS	AB=0.990;AC=28;AF=0.500;AN=56;BaseQRankSum=6.266;DP=446;FS=28.643;HRun=0;HaplotypeScore=166.6965;InbreedingCoeff=-0.1144;MQ=69.88;MQ0=7;MQRankSum=-10.788;QD=53.32;ReadPosRankSum=6.881;VQSLOD=2.8797;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:31.93:321,0,32	1/1:10,0:10:8.75:520,9,0	0/0:27,0:16:44.98:0,45,1049	0/0:41,0:27:49.55:0,50,1225	0/1:11,0:11:8.96:342,0,9	0/1:10,0:10:2.94:411,0,3	0/1:14,0:14:44.89:1035,0,45	0/0:27,0:27:69.09:0,69,1951	0/1:10,0:10:11.96:486,0,12	0/1:25,0:25:56.51:789,0,57	0/1:5,0:5:36.96:338,0,37	1/1:13,1:14:6.09:1237,6,0	0/1:7,1:8:3.94:679,0,4	1/1:16,2:18:6.08:1360,6,0	0/1:16,0:17:7.87:1730,0,8	1/1:7,1:8:21.07:1242,21,0	0/1:11,0:11:29.92:673,0,30	0/0:13,0:13:39.13:0,39,1472	0/1:17,0:14:17.46:400,0,17	0/1:16,0:16:22.92:834,0,23	0/1:16,0:16:42.16:42,0,127	0/1:14,0:14:5.05:203,0,5	0/1:20,0:20:11.96:514,0,12	1/1:11,0:11:3.01:175,3,0	0/1:21,0:21:42.88:1171,0,43	0/0:23,0:23:48.15:0,48,1557	1/1:10,0:10:24.08:1386,24,0	0/0:17,0:17:51.09:0,51,1635
chr10	99372257	.	G	GGGAAA	5841	PASS	AC=46;AF=0.852;AN=54;BaseQRankSum=0.655;DP=177;FS=1.211;HRun=0;HaplotypeScore=49.7734;InbreedingCoeff=0.6100;MQ=67.73;MQ0=0;MQRankSum=-5.278;QD=38.18;ReadPosRankSum=4.085;VQSLOD=4.5008;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,5:7:8.99:207,9,0	1/1:1,0:1:2.97:20,3,0	0/0:9,0:7:14.61:0,15,158	0/0:8,0:7:3.06:0,3,169	1/1:4,9:13:28.84:213,29,0	1/1:0,8:8:20.94:502,21,0	1/1:1,8:9:20.94:381,21,0	0/0:5,0:5:9.92:0,10,164	1/1:0,9:9:15.01:339,15,0	1/1:2,3:5:12.04:318,12,0	1/1:0,3:4:2.97:20,3,0	1/1:0,4:4:9.03:281,9,0	1/1:1,7:8:20.98:396,21,0	1/1:4,7:11:26.94:547,27,0	1/1:0,8:8:21.03:515,21,0	1/1:1,3:4:6.02:187,6,0	1/1:3,5:9:12.04:287,12,0	0/0:2,0:2:6.02:0,6,97	1/1:1,1:2:3.01:64,3,0	1/1:1,5:6:11.95:107,12,0	1/1:4,1:5:5.56:39,6,0	1/1:0,8:9:17.92:216,18,0	1/1:0,6:6:17.97:328,18,0	1/1:1,4:5:5.97:59,6,0	1/1:0,9:9:14.96:303,15,0	1/1:0,1:1:3.01:94,3,0	1/1:3,7:10:23.91:419,24,0	./.
chr10	99372452	.	GGT	G	175.08	PASS	AB=1.000;AC=28;AF=0.700;AN=40;BaseQRankSum=-0.656;DP=128;FS=3.703;HRun=0;HaplotypeScore=39.9660;InbreedingCoeff=0.2509;MQ=101.95;MQ0=4;MQRankSum=-0.131;QD=2.92;ReadPosRankSum=-0.943;VQSLOD=1.3258;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:14:24.08:36,0,24	0/0:2,0:2:0.88:0,1,2	0/0:15,0:4:8.99:0,9,93	0/0:42,0:24:3.04:0,3,204	1/1:1,1:2:3:29,3,0	0/1:3,0:3:0.02:0,0,0	1/1:6,0:6:4.92:43,5,0	0/1:5,0:5:1.08:1,0,7	1/1:1,1:2:3.01:33,3,0	./.	./.	1/1:1,1:2:3.89:31,4,0	1/1:3,0:3:6.14:28,6,0	./.	1/1:2,0:2:2.04:6,2,0	./.	1/1:3,1:4:2.73:31,3,0	1/1:2,0:2:1.36:2,1,0	1/1:5,0:5:1.16:3,1,0	./.	./.	1/1:4,0:4:3:25,3,0	0/0:1,0:1:0:0,0,0	./.	1/1:2,0:2:2.04:6,2,0	0/1:2,0:2:0.54:1,0,13	./.	1/1:1,0:1:1.82:5,2,0
chr10	99372453	.	GT	G	667.48	PASS	AB=0.692;AC=36;AF=0.783;AN=46;BaseQRankSum=-4.804;DP=128;FS=6.766;HRun=1;HaplotypeScore=37.1923;InbreedingCoeff=0.3399;MQ=101.96;MQ0=4;MQRankSum=-3.135;QD=10.11;ReadPosRankSum=-0.498;VQSLOD=0.8957;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:5,10:14:4.68:74,0,5	1/1:0,2:2:5.81:48,6,0	0/0:16,0:4:8.99:0,9,115	0/0:40,0:24:34.51:0,35,344	1/1:1,1:2:2.04:6,2,0	1/1:0,3:3:2.75:12,3,0	1/1:1,5:6:8.87:31,9,0	1/1:1,4:5:11.97:120,12,0	1/1:1,1:2:4.61:18,5,0	./.	./.	1/1:1,1:2:4.66:19,5,0	1/1:0,3:3:8.89:83,9,0	0/1:0,2:2:0:0,0,0	1/1:0,2:2:5.39:22,5,0	1/1:0,1:1:2.80:13,3,0	1/1:2,2:4:8.24:79,8,0	1/1:2,0:2:0.23:1,0,0	1/1:1,4:5:12.04:157,12,0	./.	./.	1/1:3,1:4:1.82:5,2,0	0/0:0,1:1:0.47:0,0,1	0/1:1,0:1:0:0,0,0	1/1:0,2:2:4.83:18,5,0	0/1:1,1:2:5.24:36,0,5	./.	1/1:0,1:1:3.01:42,3,0
chr10	99372979	.	T	TCC	3708.69	PASS	AB=0.795;AC=20;AF=0.357;AN=56;BaseQRankSum=15.948;DP=812;FS=9.402;HRun=0;HaplotypeScore=274.0063;InbreedingCoeff=-0.5546;MQ=52.49;MQ0=7;MQRankSum=-11.588;QD=6.33;ReadPosRankSum=13.536;VQSLOD=0.3186;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:19,9:28:99:208,0,208	0/1:14,2:16:33.44:33,0,146	0/0:37,0:27:69:0,69,1003	0/0:23,0:17:39.13:0,39,602	0/1:27,10:37:99:198,0,454	0/1:21,8:29:99:195,0,177	0/0:27,0:27:38.82:0,39,383	0/0:30,0:30:85.16:0,85,1346	0/1:23,7:30:99:194,0,146	0/1:29,7:36:99:123,0,466	0/1:23,4:27:75.09:75,0,358	0/1:19,7:26:99:179,0,273	0/1:23,9:31:99:167,0,320	0/1:15,5:20:99:103,0,218	0/1:29,12:41:99:238,0,474	0/1:22,12:34:99:280,0,347	0/1:19,5:24:62.87:195,0,63	0/0:35,0:35:99:0,105,1702	0/1:26,2:27:57.56:58,0,472	0/1:16,10:26:99:241,0,238	0/0:17,1:18:29.89:0,30,179	0/1:17,18:34:99:462,0,269	0/1:20,9:29:99:186,0,186	0/1:15,4:18:16.48:16,0,216	0/1:20,9:29:97.54:253,0,98	0/0:35,1:36:75.70:0,76,1572	0/1:29,11:40:99:305,0,410	0/0:20,0:19:54.17:0,54,853
chr10	99372980	.	T	TTCCTTTCTTC	29035.24	PASS	AB=0.773;AC=28;AF=0.500;AN=56;BaseQRankSum=10.998;DP=815;FS=2.702;HRun=0;HaplotypeScore=282.3325;InbreedingCoeff=-0.3052;MQ=53.20;MQ0=7;MQRankSum=-7.304;QD=43.40;ReadPosRankSum=7.823;VQSLOD=4.0052;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:29:40.81:1113,41,0	1/1:14,2:16:23.16:553,23,0	0/0:37,0:27:58.91:0,59,1518	0/0:23,0:18:41.76:0,42,1006	0/1:25,10:36:99:1907,0,103	0/1:21,7:29:48.90:1383,0,49	0/1:26,0:26:99:242,0,329	0/0:29,0:29:84.28:0,84,2216	1/1:8,7:29:14.69:1316,15,0	0/1:29,7:36:99:1464,0,303	0/1:23,4:27:99:1012,0,132	0/1:19,7:27:35.78:1453,0,36	0/1:21,9:31:38:1745,0,38	1/1:15,5:20:25.58:994,26,0	0/1:30,12:42:75.96:2110,0,76	0/1:22,12:34:64.17:2157,0,64	0/1:7,5:25:58.63:757,0,59	0/0:36,0:36:99:0,105,3061	0/1:25,2:26:99:727,0,148	0/1:16,10:26:49.92:1643,0,50	0/1:9,1:19:99:208,0,177	1/1:17,18:34:5.24:2796,5,0	0/1:10,9:30:87.52:1466,0,88	0/1:15,4:18:80.45:371,0,80	0/1:7,9:31:94.95:1386,0,95	0/1:34,1:35:71.79:72,0,2914	0/1:27,9:39:99:2158,0,254	0/0:20,0:19:54.14:0,54,1484
chr10	99372981	.	C	CTTCC	18098.64	PASS	AB=0.979;AC=32;AF=0.571;AN=56;BaseQRankSum=7.282;DP=825;FS=0.000;HRun=0;HaplotypeScore=246.8346;InbreedingCoeff=0.1106;MQ=53.35;MQ0=7;MQRankSum=-10.499;QD=28.19;ReadPosRankSum=6.903;VQSLOD=4.2906;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:65.44:1122,65,0	1/1:7,8:16:8.51:294,9,0	0/0:38,0:28:52.95:0,53,833	0/0:25,0:19:36.05:0,36,518	1/1:36,0:36:33.42:1195,33,0	0/1:19,9:29:45.40:617,0,45	0/1:26,0:26:99:571,0,105	0/0:28,0:28:69.21:0,69,1097	0/1:29,0:29:4.35:558,0,4	0/1:36,0:36:99:891,0,163	0/1:27,0:27:39.53:590,0,40	1/1:27,0:27:39.29:1059,39,0	1/1:33,0:32:61.70:1216,62,0	1/1:20,0:20:49.37:751,49,0	0/1:43,0:43:50.39:1400,0,50	0/1:35,0:35:13.74:1183,0,14	0/1:25,0:25:27.84:401,0,28	0/0:37,0:37:99:0,102,1661	1/1:27,0:26:8.09:669,8,0	1/1:28,0:28:26.33:855,26,0	0/1:20,0:20:75.29:125,0,75	1/1:36,0:35:26:1475,26,0	0/1:30,0:30:47.59:738,0,48	1/1:20,0:19:15.67:615,16,0	0/1:31,0:31:36.40:682,0,36	0/0:36,0:36:6.29:0,6,1534	0/1:39,0:39:99:1092,0,100	0/0:19,0:18:45.12:0,45,708
chr10	99373506	.	TCTC	T	19851.68	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=11.556;DP=612;FS=0.000;HRun=0;HaplotypeScore=93.7127;InbreedingCoeff=0.9982;MQ=85.64;MQ0=0;MQRankSum=-5.553;QD=45.43;ReadPosRankSum=6.566;VQSLOD=6.4373;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,2679	1/1:0,10:10:27.01:464,27,0	0/0:22,0:22:63.15:0,63,1409	0/0:21,0:21:57.09:0,57,1156	1/1:0,17:17:41.96:670,42,0	1/1:0,25:25:60.16:1079,60,0	1/1:0,21:21:60.12:1044,60,0	0/0:37,0:37:99:0,105,2287	1/1:0,19:19:48.16:894,48,0	1/1:0,24:24:72.19:1240,72,0	1/1:0,27:27:75.08:1297,75,0	1/1:0,17:17:45.09:799,45,0	1/1:0,6:6:18.06:335,18,0	1/1:0,13:13:33.11:613,33,0	1/1:0,16:16:30.10:558,30,0	1/1:0,20:20:51.17:948,51,0	1/1:0,33:33:81.28:1507,81,0	0/0:15,0:15:42.11:0,42,942	1/1:0,24:24:66.17:1145,66,0	1/1:0,21:21:60.07:1008,60,0	1/1:0,27:27:57.67:1062,58,0	1/1:0,20:20:57.02:918,57,0	1/1:0,25:25:71.99:1157,72,0	1/1:0,24:24:53.27:1003,53,0	1/1:0,27:27:69.19:1248,69,0	0/0:29,0:29:87.30:0,87,2123	1/1:0,21:21:51.09:862,51,0	0/0:13,0:13:39.13:0,39,910
chr10	99374343	.	GCTC	G	10363.44	PASS	AB=0.557;AC=40;AF=0.714;AN=56;BaseQRankSum=7.829;DP=469;FS=0.484;HRun=0;HaplotypeScore=88.9958;InbreedingCoeff=0.7676;MQ=53.49;MQ0=9;MQRankSum=-0.788;QD=28.95;ReadPosRankSum=3.034;VQSLOD=4.6303;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:66.23:0,66,1412	1/1:0,6:6:6.02:94,6,0	0/0:20,0:9:21.07:0,21,394	0/0:15,0:6:6.07:0,6,252	1/1:2,13:15:23.87:374,24,0	1/1:0,8:8:17.87:281,18,0	1/1:4,29:33:71.41:1124,71,0	0/0:15,0:15:36.12:0,36,766	0/1:3,9:12:74.94:301,0,75	1/1:0,20:18:51.17:796,51,0	1/1:2,6:8:8.99:141,9,0	1/1:5,21:26:54.18:844,54,0	1/1:3,11:14:21.07:328,21,0	1/1:8,9:16:33.05:466,33,0	1/1:0,17:17:42.14:657,42,0	1/1:4,13:17:48.15:729,48,0	1/1:4,18:22:45.11:677,45,0	0/0:11,0:11:29.27:0,29,601	1/1:5,5:9:15.05:235,15,0	1/1:0,14:14:23.82:375,24,0	1/1:9,41:47:23.13:1119,23,0	1/1:0,8:8:12.04:187,12,0	1/1:1,9:10:21.07:329,21,0	0/1:5,27:32:53.93:697,0,54	1/1:1,8:9:21.07:328,21,0	0/0:15,0:15:33.11:0,33,691	1/1:3,7:9:18.06:281,18,0	0/0:8,0:8:24.08:0,24,488
chr10	99374959	.	TA	T	16174.21	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=7.858;DP=597;FS=2.994;HRun=2;HaplotypeScore=61.8341;InbreedingCoeff=0.9670;MQ=89.06;MQ0=1;MQRankSum=-7.101;QD=36.84;ReadPosRankSum=6.302;VQSLOD=4.9628;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.27:0,81,1212	1/1:0,6:6:18.06:234,18,0	0/0:25,0:25:72.23:0,72,1005	0/0:22,0:22:57.04:0,57,704	1/1:0,18:18:54.18:699,54,0	1/1:0,24:24:69.22:895,69,0	1/1:0,30:30:84.27:1090,84,0	0/0:39,0:39:99:0,117,1752	1/1:0,20:20:57.19:739,57,0	1/1:0,24:24:72.23:934,72,0	1/1:0,21:21:63.20:815,63,0	1/1:0,19:19:57.18:737,57,0	1/1:0,21:21:57.18:737,57,0	1/1:0,22:22:60.19:776,60,0	1/1:1,26:27:66.21:856,66,0	1/1:0,27:27:78.25:1008,78,0	1/1:0,18:18:54.18:701,54,0	0/0:20,0:20:60.19:0,60,878	1/1:0,20:20:60.20:778,60,0	1/1:0,19:19:57.19:739,57,0	1/1:0,21:20:57.19:739,57,0	1/1:0,15:15:39.13:506,39,0	1/1:1,24:25:69.22:896,69,0	1/1:0,22:22:66.21:856,66,0	1/1:0,13:13:39.13:504,39,0	0/0:14,1:15:3.17:0,3,525	1/1:1,26:27:72.23:932,72,0	0/0:10,0:10:30.10:0,30,450
chr10	99375117	.	G	GGTCC	26677.71	PASS	AB=0.536;AC=41;AF=0.732;AN=56;BaseQRankSum=15.885;DP=554;FS=15.303;HRun=0;HaplotypeScore=143.6322;InbreedingCoeff=0.9083;MQ=74.16;MQ0=0;MQRankSum=-16.883;QD=67.88;ReadPosRankSum=2.738;VQSLOD=5.6920;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,2941	1/1:0,10:10:30.10:813,30,0	0/0:16,0:17:40.03:0,40,699	0/0:17,0:17:39.13:0,39,783	1/1:1,17:19:39.13:1024,39,0	1/1:0,19:19:57.20:1544,57,0	1/1:0,11:11:33.11:903,33,0	0/0:30,0:30:81.25:0,81,1577	1/1:0,21:27:60.21:1612,60,0	1/1:1,15:17:50.94:1185,51,0	1/1:0,20:21:39.13:1045,39,0	1/1:0,16:16:48.16:1307,48,0	1/1:0,11:11:33.11:908,33,0	1/1:0,25:25:66.23:1775,66,0	1/1:1,20:22:54.19:1464,54,0	1/1:0,25:26:72.25:1955,72,0	0/1:2,11:15:29.80:788,0,30	0/0:17,0:17:48.16:0,48,990	1/1:0,12:13:38.87:936,39,0	1/1:2,33:35:96.33:2568,96,0	1/1:2,11:17:30.10:779,30,0	1/1:1,19:21:60.21:1611,60,0	1/1:1,17:20:55.40:1420,55,0	1/1:0,11:12:24.08:643,24,0	1/1:0,13:13:36.12:978,36,0	0/0:20,0:20:60.19:0,60,1209	1/1:1,21:21:54.19:1422,54,0	0/0:12,0:12:36.12:0,36,755
chr10	99375640	.	C	CT	1988.77	PASS	AB=0.500;AC=41;AF=0.732;AN=56;BaseQRankSum=15.186;DP=361;FS=88.111;HRun=0;HaplotypeScore=112.9403;InbreedingCoeff=0.8325;MQ=75.53;MQ0=0;MQRankSum=-14.378;QD=9.12;ReadPosRankSum=5.199;VQSLOD=0.1928;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:78.26:0,78,1088	1/1:1,2:3:8.59:58,9,0	0/0:9,0:9:27.09:0,27,365	0/0:15,0:15:42.11:0,42,551	1/1:1,12:13:26.92:114,27,0	1/1:1,9:10:13.98:77,14,0	1/1:3,6:9:21.67:93,22,0	0/0:30,0:30:87.28:0,87,1203	1/1:1,10:11:18.05:99,18,0	0/1:0,11:11:9.87:128,0,10	1/1:0,17:17:37.69:144,38,0	1/1:1,9:10:23.56:94,24,0	1/1:2,7:9:21.45:89,21,0	1/1:1,5:6:12.82:49,13,0	1/1:0,5:5:13.31:54,13,0	1/1:0,10:10:26.85:111,27,0	1/1:3,3:6:7.25:34,7,0	0/0:20,0:20:60.17:0,60,819	1/1:1,4:5:11.65:66,12,0	1/1:1,24:25:64.53:286,65,0	1/1:0,1:1:2.60:10,3,0	1/1:0,17:17:43.22:165,43,0	1/1:0,13:13:33:124,33,0	1/1:0,5:5:7.11:25,7,0	1/1:0,15:15:37.64:157,38,0	0/0:20,0:20:60.20:0,60,839	1/1:0,17:17:46.22:210,46,0	0/0:17,0:17:51.17:0,51,711
chr10	99375677	.	T	TA	12069.35	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=5.880;DP=431;FS=65.346;HRun=0;HaplotypeScore=70.8731;InbreedingCoeff=0.9637;MQ=83.87;MQ0=0;MQRankSum=-11.405;QD=44.87;ReadPosRankSum=3.408;VQSLOD=-0.7328;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:69.23:0,69,964	1/1:1,5:6:15.05:239,15,0	0/0:20,0:20:51.14:0,51,668	0/0:17,0:17:45.15:0,45,617	1/1:0,15:15:39.13:622,39,0	1/1:0,7:7:21.07:335,21,0	1/1:1,19:20:51.17:803,51,0	0/0:34,0:34:99:0,102,1383	1/1:0,2:2:6.02:96,6,0	1/1:1,18:19:54.08:859,54,0	1/1:1,24:25:69.23:1098,69,0	1/1:1,10:11:30.10:478,30,0	1/1:0,14:14:42.14:670,42,0	1/1:1,9:10:27.09:430,27,0	1/1:1,10:11:30.10:478,30,0	1/1:0,15:15:45.15:719,45,0	1/1:0,15:16:45.15:707,45,0	0/0:22,0:22:63.17:0,63,859	1/1:3,11:14:42.14:661,42,0	1/1:0,13:13:39.13:622,39,0	1/1:1,9:10:24.08:383,24,0	1/1:0,15:15:45.15:716,45,0	1/1:1,13:14:39.13:621,39,0	1/1:0,3:3:9.03:143,9,0	1/1:0,24:24:72.25:1148,72,0	0/0:23,0:23:69.23:0,69,964	1/1:0,5:5:15.05:239,15,0	0/0:15,0:15:45.15:0,45,629
chr10	99375725	.	GTACACA	G	8399.30	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=7.328;DP=480;FS=78.377;HRun=0;HaplotypeScore=145.9932;InbreedingCoeff=0.8475;MQ=57.29;MQ0=7;MQRankSum=-5.638;QD=26.25;ReadPosRankSum=2.444;VQSLOD=1.6352;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:39.97:128,0,40	1/1:3,3:6:9.03:183,9,0	0/0:26,0:10:17.89:0,18,242	0/0:30,0:15:14.40:0,14,259	1/1:10,5:15:23.86:340,24,0	1/1:3,3:6:12.02:228,12,0	1/1:16,0:16:14.93:118,15,0	0/0:40,0:40:88.73:0,89,1122	1/1:1,4:5:6.02:136,6,0	1/1:14,3:17:37.57:571,38,0	1/1:16,14:30:57.44:904,57,0	1/1:10,6:16:34.57:591,35,0	1/1:11,2:13:26.77:305,27,0	1/1:5,7:12:21.05:420,21,0	1/1:6,4:10:21.04:319,21,0	1/1:9,5:14:26.98:451,27,0	1/1:14,2:16:29.93:373,30,0	0/0:23,0:23:63.03:0,63,1548	1/1:10,0:10:20.90:167,21,0	1/1:2,11:13:33.10:694,33,0	1/1:19,2:21:35.96:417,36,0	1/1:11,7:18:36.63:608,37,0	1/1:8,8:16:30.06:521,30,0	1/1:5,5:10:11.76:269,12,0	1/1:12,3:15:21.02:271,21,0	0/0:26,0:26:72.15:0,72,1064	1/1:6,4:10:29.46:386,29,0	0/0:15,0:15:39.04:0,39,529
chr10	99375726	.	TACACATAC	T	3973.51	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=10.672;DP=482;FS=72.385;HRun=0;HaplotypeScore=175.1189;InbreedingCoeff=0.5561;MQ=57.07;MQ0=7;MQRankSum=-5.221;QD=12.34;ReadPosRankSum=1.204;VQSLOD=0.3235;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:39.90:334,0,40	1/1:6,0:6:8.97:72,9,0	0/0:27,0:10:17.90:0,18,243	0/0:30,0:15:14.51:0,15,263	1/1:14,1:15:23.74:225,24,0	1/1:6,0:6:11.94:90,12,0	0/1:16,0:16:3.20:78,0,3	0/0:38,0:38:89.86:0,90,1414	1/1:5,0:5:5.97:44,6,0	1/1:17,0:17:17.09:243,17,0	1/1:29,0:30:21.20:330,21,0	1/1:15,1:16:19.09:275,19,0	1/1:13,0:13:22.29:225,22,0	1/1:8,1:9:20.40:143,20,0	1/1:9,1:10:15.71:130,16,0	1/1:14,0:14:20.62:152,21,0	0/1:17,0:17:4.55:220,0,5	0/0:24,0:24:63.50:0,63,1930	0/1:10,0:10:17.13:76,0,17	1/1:13,0:13:32.44:231,32,0	0/1:22,0:22:59.38:291,0,59	1/1:18,0:18:21.12:234,21,0	1/1:15,1:16:21.71:193,22,0	1/1:10,0:10:11.51:84,12,0	1/1:16,0:16:15.05:164,15,0	0/0:25,0:25:72.16:0,72,1525	1/1:10,0:10:4.49:140,4,0	0/0:16,0:16:42.05:0,42,750
chr10	99375728	.	CACAT	C	5177.83	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=11.346;DP=481;FS=72.719;HRun=0;HaplotypeScore=142.9621;InbreedingCoeff=0.8278;MQ=52.40;MQ0=8;MQRankSum=-5.325;QD=15.98;ReadPosRankSum=1.272;VQSLOD=1.5469;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:41.56:46,0,42	1/1:6,0:6:9.02:99,9,0	0/0:24,0:7:17.89:0,18,230	0/0:30,0:15:15.83:0,16,276	1/1:16,0:16:23.84:215,24,0	1/1:6,0:6:12.02:126,12,0	1/1:15,1:16:14.93:118,15,0	0/0:39,0:39:81.37:0,81,771	1/1:5,0:5:6.02:68,6,0	1/1:17,0:17:37.56:375,38,0	1/1:29,0:29:60.73:560,61,0	1/1:15,1:16:34.89:385,35,0	1/1:12,0:12:26.37:195,26,0	1/1:10,0:10:21.02:217,21,0	1/1:11,0:11:20.98:188,21,0	1/1:13,0:13:26.93:249,27,0	1/1:18,0:18:13.03:228,13,0	0/0:24,0:24:62.63:0,63,1229	1/1:9,0:9:18.37:140,18,0	1/1:13,0:13:33.06:354,33,0	1/1:25,0:24:6.62:304,7,0	1/1:16,1:17:36.52:393,37,0	1/1:17,0:17:29.96:294,30,0	1/1:10,0:10:11.77:133,12,0	1/1:16,0:16:20.99:193,21,0	0/0:25,0:25:52.47:0,52,545	1/1:9,1:10:29.86:296,30,0	0/0:15,0:15:41.65:0,42,378
chr10	99375730	.	CAT	C	3895.06	PASS	AB=0.970;AC=43;AF=0.768;AN=56;BaseQRankSum=9.427;DP=484;FS=32.330;HRun=0;HaplotypeScore=134.6550;InbreedingCoeff=0.4444;MQ=51.08;MQ0=8;MQRankSum=-2.985;QD=10.47;ReadPosRankSum=3.201;VQSLOD=1.7144;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:14.62:0,15,79	1/1:5,0:5:8.94:75,9,0	0/0:23,1:7:17.93:0,18,181	0/0:30,0:14:6.75:0,7,202	0/1:18,0:18:17.78:141,0,18	1/1:5,1:6:11.89:84,12,0	0/1:14,3:17:1.23:98,0,1	0/1:35,0:35:17.49:17,0,452	1/1:5,0:5:5.93:40,6,0	1/1:17,1:18:16.12:292,16,0	1/1:29,1:30:59.93:430,60,0	1/1:15,0:15:34.54:239,35,0	1/1:12,0:12:24.76:155,25,0	1/1:10,0:10:20.75:142,21,0	1/1:11,0:11:20.83:154,21,0	1/1:11,2:13:26.70:195,27,0	1/1:16,2:18:12.59:188,13,0	0/0:25,0:25:36.14:0,36,875	1/1:8,0:8:20.86:159,21,0	1/1:14,0:14:15.07:202,15,0	1/1:26,0:25:4.66:229,5,0	1/1:17,1:18:35.70:259,36,0	1/1:15,2:17:29.71:209,30,0	1/1:10,0:10:11.74:80,12,0	1/1:16,0:16:20.56:148,21,0	0/1:25,0:25:83.12:102,0,83	1/1:11,0:11:32.62:225,33,0	0/1:14,0:14:31.26:31,0,165
chr10	99375732	.	TAC	T	1958.08	PASS	AB=0.959;AC=32;AF=0.571;AN=56;BaseQRankSum=7.208;DP=504;FS=13.919;HRun=0;HaplotypeScore=145.4463;InbreedingCoeff=-0.0695;MQ=50.72;MQ0=11;MQRankSum=-4.552;QD=4.70;ReadPosRankSum=3.955;VQSLOD=2.3383;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:33:17.04:84,17,0	1/1:7,0:7:8.17:35,8,0	0/0:26,0:7:3.01:0,3,43	0/1:32,0:14:8.28:15,0,8	0/1:21,0:21:38.08:38,0,102	1/1:7,0:7:8.23:36,8,0	0/0:17,0:17:8.88:0,9,63	0/1:22,13:35:3.47:371,0,3	1/1:5,0:5:5.49:24,5,0	0/1:16,0:16:16.53:50,0,17	0/1:30,0:30:15.48:80,0,15	1/1:15,0:15:24.70:108,25,0	0/0:13,0:13:0.05:0,0,54	0/1:10,0:10:2:44,0,2	1/1:11,0:11:7.20:27,7,0	1/1:12,0:12:13.83:63,14,0	0/1:18,0:18:18.58:19,0,26	0/0:21,2:23:8.74:0,9,570	0/0:8,0:8:5.98:0,6,57	0/1:17,0:17:71.08:74,0,71	0/1:30,0:29:1.91:2,0,121	1/1:19,0:19:22.34:95,22,0	0/1:18,0:18:25.46:51,0,25	0/1:11,0:11:27.47:33,0,27	0/1:16,0:16:10.26:10,0,10	1/1:6,20:26:58.01:641,58,0	0/1:13,0:12:21.30:42,0,21	0/1:8,6:14:40.09:182,0,40
chr10	99376302	.	GGAAGAA	G	210.70	PASS	AC=2;AF=0.042;AN=48;BaseQRankSum=-1.362;DP=673;FS=6.621;HRun=0;HaplotypeScore=182.9584;InbreedingCoeff=0.5303;MQ=46.73;MQ0=18;MQRankSum=2.559;QD=13.17;ReadPosRankSum=1.733;VQSLOD=2.5491;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:18.06:0,18,429	0/0:9,0:9:3.01:0,3,36	./.	./.	0/0:30,0:28:23.95:0,24,249	0/0:30,0:30:6.02:0,6,109	0/0:19,0:17:0:0,0,0	./.	0/0:28,0:27:12.03:0,12,213	0/0:36,0:36:42.09:0,42,651	0/0:31,0:29:14.71:0,15,135	0/0:28,0:27:27.09:0,27,512	0/0:32,0:31:14.98:0,15,226	0/0:18,0:17:12.04:0,12,182	0/0:32,0:32:20.25:0,20,299	0/0:28,0:28:29.45:0,29,381	0/0:25,0:24:11.99:0,12,253	./.	0/0:19,0:18:12.04:0,12,202	0/0:30,0:28:12.01:0,12,171	0/0:10,0:10:3.01:0,3,51	0/0:24,0:24:21.02:0,21,304	0/0:23,0:22:12.51:0,13,144	0/0:20,0:17:11.25:0,11,149	0/0:35,0:34:45.15:0,45,791	1/1:10,6:16:18.06:299,18,0	0/0:45,0:42:27.98:0,28,429	0/0:11,0:8:6.02:0,6,141
chr10	99376347	.	A	AAAG	313.11	PASS	AB=0.961;AC=9;AF=0.161;AN=56;BaseQRankSum=7.905;DP=750;FS=17.109;HRun=0;HaplotypeScore=162.3162;InbreedingCoeff=-0.0239;MQ=45.57;MQ0=41;MQRankSum=-5.854;QD=1.50;ReadPosRankSum=3.105;VQSLOD=1.9225;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:77.68:0,78,1181	0/0:10,0:10:23.90:0,24,268	1/1:5,0:1:2.04:6,2,0	0/0:4,0:3:8.89:0,9,96	0/0:38,0:36:70.80:0,71,1039	0/0:37,0:37:35.67:0,36,847	0/0:33,0:31:78.12:0,78,996	0/0:30,0:15:41.96:0,42,596	0/0:24,0:23:21.46:0,21,455	0/1:42,0:43:65.19:65,0,1341	0/0:30,0:29:32.31:0,32,752	0/1:29,0:29:78.37:78,0,504	0/0:35,0:35:51.19:0,51,712	0/0:22,0:22:41.26:0,41,547	0/0:34,0:34:58.66:0,59,889	0/1:28,0:28:5.34:5,0,680	0/1:23,0:22:99:113,0,379	0/0:15,0:14:37.68:0,38,543	0/1:19,0:13:45.56:46,0,193	0/0:29,0:27:48.15:0,48,616	0/0:20,0:20:47.36:0,47,639	0/0:26,0:26:54.84:0,55,775	0/1:29,0:30:99:107,0,613	0/1:21,6:26:24.02:24,0,534	0/0:39,0:38:27.23:0,27,1109	0/0:18,0:17:51.16:0,51,759	0/0:45,0:44:19.23:0,19,915	0/0:21,0:16:48.11:0,48,722
chr10	99377320	.	AGGTGCTGGGGTGCTGG	A	5687.98	PASS	AC=40;AF=0.741;AN=54;BaseQRankSum=8.879;DP=390;FS=0.000;HRun=0;HaplotypeScore=151.7245;InbreedingCoeff=0.7228;MQ=63.62;MQ0=1;MQRankSum=-4.289;QD=20.84;ReadPosRankSum=0.412;VQSLOD=3.8014;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:42.13:0,42,2065	./.	0/0:16,0:13:6.91:0,7,83	0/0:16,0:13:5.85:0,6,46	1/1:6,11:17:3.41:19,3,0	1/1:6,14:20:12.04:532,12,0	1/1:25,0:25:29.94:442,30,0	0/0:13,0:13:15.03:0,15,228	1/1:6,13:19:9.03:399,9,0	1/1:1,12:13:35.79:393,36,0	1/1:2,12:14:14.98:512,15,0	1/1:6,9:15:6.02:266,6,0	1/1:2,8:10:9.03:399,9,0	1/1:3,8:11:6.01:133,6,0	1/1:2,5:7:6.02:266,6,0	1/1:3,7:10:6.02:266,6,0	1/1:15,13:28:9.02:291,9,0	0/0:29,0:29:63.07:0,63,3174	1/1:9,5:13:14.68:222,15,0	1/1:3,6:9:8.98:277,9,0	1/1:15,0:15:12:124,12,0	1/1:0,4:4:8.92:282,9,0	1/1:3,5:8:6.49:267,6,0	1/1:5,13:18:9.03:312,9,0	1/1:4,7:11:6.02:266,6,0	0/0:13,0:13:30.09:0,30,1259	1/1:5,0:5:2.99:24,3,0	0/0:7,0:7:12.03:0,12,529
chr10	99377562	.	C	CT	15170.34	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=14.626;DP=525;FS=16.447;HRun=1;HaplotypeScore=124.6572;InbreedingCoeff=0.9833;MQ=70.16;MQ0=0;MQRankSum=-6.950;QD=39.82;ReadPosRankSum=2.211;VQSLOD=2.9052;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.19:0,57,740	1/1:2,7:9:21.07:314,21,0	0/0:15,0:15:35.80:0,36,429	0/0:18,0:17:35.51:0,36,499	1/1:1,18:20:57.10:785,57,0	1/1:3,28:31:87.29:1302,87,0	1/1:2,18:20:45.15:673,45,0	0/0:34,0:34:96.30:0,96,1234	1/1:2,18:20:51.17:764,51,0	1/1:1,13:14:39.11:563,39,0	1/1:1,22:23:60.16:864,60,0	1/1:2,14:16:45.15:673,45,0	1/1:2,13:15:42.06:576,42,0	1/1:2,13:15:36.12:539,36,0	1/1:0,21:21:63.21:943,63,0	1/1:0,14:14:42.14:628,42,0	1/1:2,13:15:39.09:558,39,0	0/0:21,0:21:60.19:0,60,779	1/1:1,18:19:54.16:786,54,0	1/1:2,18:20:57.19:852,57,0	1/1:4,18:22:57.19:853,57,0	1/1:0,4:4:12.04:178,12,0	1/1:0,16:16:39.13:583,39,0	1/1:2,19:21:51.17:764,51,0	1/1:0,17:17:51.17:761,51,0	0/0:18,1:19:9.19:0,9,617	1/1:1,27:29:81.27:1211,81,0	0/0:16,0:16:48.16:0,48,621
chr10	99377684	.	G	GA	14730.37	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=10.294;DP=505;FS=1.859;HRun=1;HaplotypeScore=77.2647;InbreedingCoeff=0.9483;MQ=73.12;MQ0=1;MQRankSum=-0.303;QD=39.70;ReadPosRankSum=3.859;VQSLOD=5.5157;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.15:0,54,685	1/1:0,8:8:18.06:270,18,0	0/0:11,0:10:17.89:0,18,174	0/0:10,0:8:2.07:0,2,113	1/1:0,27:27:72.24:1079,72,0	1/1:0,29:29:81.27:1214,81,0	1/1:1,9:10:24.08:340,24,0	0/0:30,0:30:81.26:0,81,1052	1/1:0,23:23:63.21:944,63,0	1/1:1,23:24:69.22:1004,69,0	1/1:1,19:20:51.17:754,51,0	1/1:0,11:11:30.10:450,30,0	1/1:0,13:13:39.13:584,39,0	1/1:0,8:8:24.08:359,24,0	1/1:1,14:15:39.13:585,39,0	1/1:0,15:15:45.15:675,45,0	1/1:1,37:38:99:1528,102,0	0/0:25,0:25:72.23:0,72,933	1/1:2,13:14:36.10:519,36,0	1/1:2,17:19:45.12:650,45,0	1/1:0,13:13:30.10:450,30,0	1/1:1,14:15:39.13:585,39,0	1/1:0,15:15:42.14:629,42,0	1/1:0,4:4:9.03:135,9,0	1/1:0,20:20:57.19:854,57,0	0/0:17,0:17:51.17:0,51,662	1/1:0,29:29:75.25:1124,75,0	0/0:22,0:22:51.16:0,51,662
chr10	99378318	.	AG	A	17793.25	PASS	AB=0.875;AC=43;AF=0.768;AN=56;BaseQRankSum=15.004;DP=656;FS=0.701;HRun=2;HaplotypeScore=134.6431;InbreedingCoeff=0.8993;MQ=67.53;MQ0=1;MQRankSum=-2.202;QD=34.96;ReadPosRankSum=4.986;VQSLOD=4.1701;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.27:0,81,1213	1/1:0,11:11:33.11:427,33,0	0/0:19,0:19:56.42:0,56,730	0/0:21,0:21:47.10:0,47,606	1/1:0,11:11:30.10:389,30,0	1/1:0,33:33:96.31:1246,96,0	1/1:0,31:31:93.30:1207,93,0	0/0:20,0:20:57.18:0,57,815	1/1:1,33:34:99:1273,99,0	1/1:0,14:14:42.14:545,42,0	1/1:0,14:14:36.12:467,36,0	1/1:2,29:30:84.27:1089,84,0	1/1:0,33:33:93.30:1207,93,0	1/1:0,23:23:54.18:701,54,0	1/1:0,22:22:66.21:857,66,0	1/1:1,20:21:60.20:779,60,0	1/1:1,31:32:81.26:1052,81,0	0/0:45,0:45:99:0,129,1934	1/1:0,24:24:72.20:905,72,0	1/1:0,14:14:39.13:506,39,0	1/1:2,58:60:99:2199,172,0	1/1:1,14:15:25.19:525,25,0	1/1:0,13:13:33.11:429,33,0	1/1:0,27:27:75.24:974,75,0	1/1:0,17:17:36.12:467,36,0	0/1:12,2:14:41.76:42,0,375	1/1:0,15:15:39.13:506,39,0	0/0:14,0:14:42.14:0,42,629
chr10	99378855	.	G	GA	846.54	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=-6.706;DP=613;FS=13.187;HRun=0;HaplotypeScore=140.7862;InbreedingCoeff=0.4663;MQ=83.63;MQ0=0;MQRankSum=-0.565;QD=11.29;ReadPosRankSum=-7.045;VQSLOD=1.4469;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:35:80.26:917,80,0	0/0:13,0:13:24.28:0,24,152	0/0:54,0:43:99:0,103,1284	0/0:24,0:19:45.83:0,46,522	0/0:24,0:24:48.45:0,48,333	0/0:18,0:18:32.76:0,33,208	0/0:27,0:27:48.95:0,49,324	0/0:31,0:31:87.27:0,87,1168	0/0:22,0:22:34.79:0,35,252	0/1:25,0:25:4.71:5,0,226	0/0:18,0:18:39.68:0,40,234	0/0:17,0:17:49.35:0,49,271	0/0:22,0:22:23.85:0,24,269	0/0:21,0:21:13.55:0,14,167	0/0:19,0:19:37.66:0,38,232	0/0:12,0:12:34.48:0,34,180	0/0:18,0:18:44.21:0,44,241	0/0:11,0:11:33.11:0,33,458	0/1:15,0:15:34.62:35,0,67	0/0:36,0:36:80.68:0,81,500	0/0:17,0:17:34.31:0,34,205	0/0:18,0:18:29.93:0,30,233	0/0:30,0:30:60.54:0,61,384	0/0:9,0:9:7.03:0,7,67	0/0:22,0:22:51.64:0,52,280	0/0:20,0:20:57.12:0,57,754	0/0:25,0:24:41.73:0,42,299	0/0:10,0:10:30.10:0,30,417
chr10	99379235	.	G	GT	1141.96	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.874;DP=604;FS=1.544;HRun=1;HaplotypeScore=161.7996;InbreedingCoeff=0.9997;MQ=81.94;MQ0=0;MQRankSum=-3.125;QD=29.28;ReadPosRankSum=1.347;VQSLOD=3.5003;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,36:39:84.27:1237,84,0	0/0:12,0:12:36.12:0,36,467	0/0:23,0:23:59.36:0,59,752	0/0:14,0:14:41.52:0,42,436	0/0:22,0:22:57.18:0,57,720	0/0:27,0:27:72.12:0,72,881	0/0:19,0:19:54.10:0,54,661	0/0:30,0:30:87.28:0,87,1117	0/0:18,0:18:54.15:0,54,659	0/0:15,0:15:44.51:0,45,551	0/0:20,0:20:57.18:0,57,735	0/0:22,0:22:60.18:0,60,758	0/0:16,0:16:45.13:0,45,569	0/0:22,0:22:54.18:0,54,700	0/0:16,0:16:42.14:0,42,545	0/0:24,0:24:66.21:0,66,856	0/0:26,0:26:69.21:0,69,881	0/0:20,0:20:57.08:0,57,685	0/0:18,0:18:51.10:0,51,623	0/0:31,0:31:89.90:0,90,1099	0/0:18,0:18:45.13:0,45,567	0/0:15,0:15:45.10:0,45,552	0/0:25,0:25:75.20:0,75,923	0/0:20,0:20:57.11:0,57,703	0/0:27,0:26:75.23:0,75,947	0/0:22,0:22:60.18:0,60,765	0/0:20,0:19:51.15:0,51,645	0/0:23,0:23:69.22:0,69,892
chr10	99379264	.	C	CT	14922.70	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=11.681;DP=574;FS=1.699;HRun=3;HaplotypeScore=140.9221;InbreedingCoeff=0.9931;MQ=82.95;MQ0=0;MQRankSum=-3.715;QD=34.87;ReadPosRankSum=4.187;VQSLOD=3.7060;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:54.46:0,54,689	1/1:1,8:9:24.08:330,24,0	0/0:21,0:21:38.39:0,38,525	0/0:18,0:18:11.45:0,11,346	1/1:3,28:31:84.28:1151,84,0	1/1:1,23:24:60.20:825,60,0	1/1:0,14:14:39.13:534,39,0	0/0:30,0:30:81.23:0,81,954	1/1:2,15:17:45.15:618,45,0	1/1:4,13:17:45.12:571,45,0	1/1:2,24:26:66.22:902,66,0	1/1:1,19:20:51.17:700,51,0	1/1:0,13:13:36.10:492,36,0	1/1:2,21:23:54.18:731,54,0	1/1:0,18:18:45.15:613,45,0	1/1:1,22:23:60.20:820,60,0	1/1:1,20:21:51.10:677,51,0	0/0:14,0:14:42.11:0,42,491	1/1:3,14:17:44.94:585,45,0	1/1:4,30:34:90.30:1234,90,0	1/1:1,13:14:30.06:390,30,0	1/1:1,14:15:42.14:577,42,0	1/1:0,21:22:63.21:856,63,0	1/1:1,17:18:42.14:570,42,0	1/1:0,28:27:72.24:987,72,0	0/0:20,0:20:57.17:0,57,684	1/1:3,21:22:60.08:760,60,0	0/0:18,0:18:51.16:0,51,612
chr10	99379401	.	A	AT	14857.88	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-9.950;DP=551;FS=3.964;HRun=2;HaplotypeScore=51.3166;InbreedingCoeff=0.9954;MQ=80.26;MQ0=0;MQRankSum=-2.200;QD=35.89;ReadPosRankSum=5.335;VQSLOD=4.9796;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:75.22:1055,75,0	1/1:0,8:8:24.08:344,24,0	0/0:19,0:19:35.68:0,36,396	0/0:9,0:9:23.18:0,23,217	1/1:1,25:26:72:905,72,0	1/1:1,23:24:60.20:862,60,0	1/1:1,14:15:27.09:388,27,0	0/0:40,0:40:99:0,111,1343	1/1:3,9:12:30.09:415,30,0	1/1:2,27:29:78.20:1043,78,0	1/1:1,22:23:54.18:777,54,0	1/1:0,17:17:48.16:687,48,0	1/1:0,9:9:24.08:345,24,0	1/1:0,17:17:51.17:733,51,0	1/1:0,17:17:39.13:561,39,0	1/1:2,15:17:39.13:561,39,0	1/1:1,16:17:36.12:517,36,0	0/0:30,0:30:84.19:0,84,975	1/1:3,10:13:31.83:373,32,0	1/1:0,22:22:66.13:903,66,0	1/1:0,22:22:57.19:820,57,0	1/1:0,14:14:35.88:439,36,0	1/1:1,22:23:57.19:812,57,0	1/1:0,11:11:30.10:431,30,0	1/1:0,27:27:69.10:940,69,0	0/0:27,2:29:16.14:0,16,873	1/1:0,25:25:66.22:947,66,0	0/0:10,0:10:30.09:0,30,371
chr10	99379624	.	G	GAAAAAAAA	9955.85	PASS	AB=0.965;AC=23;AF=0.411;AN=56;BaseQRankSum=6.697;DP=497;FS=7.714;HRun=7;HaplotypeScore=203.9199;InbreedingCoeff=-0.5140;MQ=50.49;MQ0=5;MQRankSum=-11.410;QD=24.95;ReadPosRankSum=-5.676;VQSLOD=-0.7420;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:61.40:137,0,61	0/1:8,0:8:12.67:194,0,13	0/1:15,0:11:0.51:1,0,270	0/0:12,0:7:11.92:0,12,209	0/1:26,0:25:99:705,0,130	0/1:18,0:18:45.31:301,0,45	0/1:10,1:10:43.43:142,0,43	0/0:18,0:17:24.48:0,24,572	0/1:12,0:13:28.33:545,0,28	0/1:24,0:24:99:790,0,149	0/1:16,1:16:23.38:304,0,23	0/1:7,0:7:37.29:66,0,37	0/1:10,0:11:25.37:338,0,25	1/1:9,0:9:9.03:154,9,0	0/1:18,0:19:15.44:653,0,15	0/1:14,0:15:30.86:381,0,31	0/1:18,0:17:45.74:321,0,46	0/0:26,0:26:69.20:0,69,1470	0/1:22,0:23:99:439,0,105	0/1:31,1:33:99:1216,0,111	0/0:14,0:14:3.31:0,3,43	0/1:15,0:15:99:302,0,109	0/1:21,0:21:38.32:764,0,38	0/1:19,0:19:99:129,0,111	0/1:19,2:20:19.15:588,0,19	0/0:22,0:22:53.60:0,54,813	0/1:28,0:29:1.61:1486,0,2	0/0:6,0:6:8.73:0,9,227
chr10	99379632	.	G	GA	2096.73	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=2.177;DP=571;FS=15.268;HRun=11;HaplotypeScore=113.6749;InbreedingCoeff=0.4915;MQ=56.05;MQ0=4;MQRankSum=-3.551;QD=4.00;ReadPosRankSum=-0.950;VQSLOD=0.0813;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:33:10.55:48,11,0	1/1:5,0:6:5.82:36,6,0	0/1:19,0:15:1.72:2,0,110	0/0:21,0:12:19.59:0,20,140	1/1:29,0:28:11.88:57,12,0	1/1:4,0:21:10.48:64,10,0	1/1:4,1:17:5.68:29,6,0	1/1:4,15:19:45.40:441,45,0	1/1:13,0:13:3.68:18,4,0	1/1:26,0:29:11.89:74,12,0	1/1:4,0:17:11.03:50,11,0	1/1:3,0:13:4.09:17,4,0	1/1:5,0:21:8.99:43,9,0	1/1:1,0:14:5.68:29,6,0	1/1:18,0:19:8:54,8,0	1/1:5,0:18:13.71:71,14,0	0/1:16,0:15:0:0,0,0	0/0:21,0:26:34.60:0,35,410	1/1:7,0:26:7.59:80,8,0	1/1:25,0:25:11.24:50,11,0	1/1:14,0:15:6.30:38,6,0	1/1:11,0:12:3.31:16,3,0	1/1:17,0:19:5.48:72,5,0	1/1:6,0:25:8.05:37,8,0	1/1:8,0:31:19.07:88,19,0	1/1:5,22:28:65.95:643,66,0	1/1:27,0:28:9.20:37,9,0	1/1:2,3:6:14.90:136,15,0
chr10	99380290	.	A	ACT	18862.72	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-14.015;DP=521;FS=9.375;HRun=0;HaplotypeScore=53.1090;InbreedingCoeff=0.9816;MQ=92.99;MQ0=1;MQRankSum=-5.545;QD=46.12;ReadPosRankSum=7.011;VQSLOD=5.8624;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:37:84.29:1573,84,0	1/1:0,3:3:9.03:169,9,0	0/0:20,0:20:51.63:0,52,716	0/0:26,0:26:50.90:0,51,761	1/1:0,19:20:54.19:1011,54,0	1/1:0,16:16:42.14:787,42,0	1/1:1,18:20:39.13:731,39,0	0/0:24,0:24:69.22:0,69,995	1/1:1,12:13:36.12:674,36,0	1/1:2,17:19:51.17:955,51,0	1/1:3,8:10:12.04:225,12,0	1/1:0,15:17:36.12:674,36,0	1/1:2,17:20:42.14:786,42,0	1/1:0,17:17:51.17:955,51,0	1/1:1,11:12:33.11:618,33,0	1/1:2,9:11:27.09:506,27,0	1/1:0,41:41:99:2023,108,0	0/0:10,0:10:30.10:0,30,442	1/1:1,15:16:45.15:832,45,0	1/1:1,15:16:45.15:843,45,0	1/1:0,22:22:57.20:1068,57,0	1/1:0,17:17:39.13:730,39,0	1/1:1,20:22:60.21:1123,60,0	1/1:0,18:18:42.14:787,42,0	1/1:1,15:16:42.14:786,42,0	0/0:22,0:22:63.21:0,63,911	1/1:2,22:25:54.09:1007,54,0	0/0:10,0:10:30.07:0,30,418
chr10	99381178	.	AT	A	15341.45	PASS	AB=0.913;AC=44;AF=0.786;AN=56;BaseQRankSum=17.600;DP=637;FS=3.299;HRun=1;HaplotypeScore=179.6647;InbreedingCoeff=0.8002;MQ=83.17;MQ0=0;MQRankSum=-3.329;QD=30.74;ReadPosRankSum=5.020;VQSLOD=4.5637;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,154,2437	1/1:0,10:10:27.04:317,27,0	0/0:28,0:28:53.71:0,54,848	0/0:16,2:17:8.44:0,8,295	1/1:0,23:23:60.14:720,60,0	1/1:2,24:26:75.18:899,75,0	1/1:1,18:19:54.17:668,54,0	0/0:30,0:30:87.30:0,87,1390	1/1:0,15:15:45.14:558,45,0	1/1:0,24:24:72.23:890,72,0	1/1:2,16:18:48.15:595,48,0	1/1:0,19:19:57.13:687,57,0	1/1:3,20:23:60.19:743,60,0	1/1:1,22:23:66.12:783,66,0	1/1:0,28:28:81.25:1004,81,0	1/1:0,27:27:78.25:966,78,0	1/1:0,26:26:72.23:892,72,0	0/1:21,2:23:5.23:5,0,882	1/1:0,11:11:33.07:382,33,0	1/1:0,24:24:72.23:892,72,0	1/1:2,26:28:75.12:877,75,0	1/1:0,17:17:51.16:631,51,0	1/1:0,15:15:42.13:519,42,0	1/1:0,18:18:42.13:521,42,0	1/1:1,21:22:57.14:688,57,0	0/1:26,3:29:27.29:27,0,1087	1/1:2,29:31:87.27:1077,87,0	0/0:10,0:10:30.10:0,30,479
chr10	99381790	.	A	ATTT	5571.39	PASS	AB=0.977;AC=44;AF=0.786;AN=56;BaseQRankSum=12.345;DP=509;FS=4.468;HRun=10;HaplotypeScore=102.9282;InbreedingCoeff=0.7779;MQ=82.82;MQ0=1;MQRankSum=-2.068;QD=14.47;ReadPosRankSum=2.275;VQSLOD=2.7216;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:39:99:0,104,1254	1/1:0,0:5:14.94:114,15,0	0/0:15,0:16:16.37:0,16,184	0/1:18,0:17:7.42:7,0,172	1/1:5,0:16:25.12:180,25,0	1/1:0,0:23:59.77:457,60,0	1/1:5,0:15:26.94:261,27,0	0/0:37,0:37:81.14:0,81,961	1/1:5,1:16:22.18:197,22,0	1/1:3,0:10:20.96:197,21,0	1/1:4,0:22:41.82:330,42,0	1/1:2,0:12:26.90:206,27,0	1/1:1,0:8:14.94:115,15,0	1/1:2,0:11:20.92:160,21,0	1/1:0,0:17:41.84:320,42,0	1/1:2,0:19:38.85:297,39,0	1/1:4,0:22:41.84:320,42,0	0/0:25,0:25:63.17:0,63,764	1/1:10,0:25:44.83:343,45,0	1/1:4,0:20:46.08:372,46,0	1/1:4,0:16:29.39:211,29,0	1/1:2,0:5:5.98:46,6,0	1/1:2,0:12:21.10:168,21,0	1/1:1,1:24:59.79:492,60,0	1/1:0,0:11:29.89:228,30,0	0/1:19,1:21:12.66:13,0,447	1/1:4,1:36:65.77:537,66,0	0/0:7,0:7:15.04:0,15,181
chr10	99382193	.	CG	C	10681.31	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=8.771;DP=457;FS=18.661;HRun=4;HaplotypeScore=62.9681;InbreedingCoeff=0.9813;MQ=85.18;MQ0=0;MQRankSum=-2.800;QD=30.52;ReadPosRankSum=6.829;VQSLOD=2.8611;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.17:0,63,848	1/1:1,4:5:12.04:144,12,0	0/0:10,0:10:20.87:0,21,199	0/0:17,0:17:21.25:0,21,259	1/1:1,17:18:48.08:556,48,0	1/1:0,16:16:48.15:575,48,0	1/1:0,13:13:36.11:431,36,0	0/0:21,0:21:63.16:0,63,842	1/1:1,15:16:30.09:359,30,0	1/1:0,16:16:48.15:571,48,0	1/1:2,12:14:23.74:262,24,0	1/1:2,13:15:33.10:395,33,0	1/1:0,13:13:36.11:431,36,0	1/1:0,14:14:33.10:395,33,0	1/1:1,21:22:51.16:611,51,0	1/1:1,19:20:48.15:575,48,0	1/1:2,23:25:63.19:754,63,0	0/0:14,0:14:42.11:0,42,551	1/1:0,15:15:45.12:526,45,0	1/1:1,15:16:45.14:539,45,0	1/1:2,23:25:63.19:754,63,0	1/1:1,12:13:33.10:395,33,0	1/1:0,10:10:27.08:323,27,0	1/1:0,17:17:45.14:539,45,0	1/1:0,21:21:57.17:683,57,0	0/0:20,0:20:30.62:0,31,638	1/1:0,26:26:72.22:861,72,0	0/0:3,0:3:9.03:0,9,125
chr10	99383949	.	AT	A	6494.98	PASS	AB=0.926;AC=43;AF=0.768;AN=56;BaseQRankSum=5.644;DP=546;FS=20.351;HRun=10;HaplotypeScore=139.1858;InbreedingCoeff=0.8885;MQ=64.61;MQ0=0;MQRankSum=-3.093;QD=16.24;ReadPosRankSum=4.244;VQSLOD=3.8719;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:37:77.87:0,78,411	1/1:1,8:9:16.55:134,17,0	0/1:23,2:18:28.13:28,0,213	0/0:18,0:16:12.42:0,12,185	1/1:5,13:18:23.16:207,23,0	1/1:3,14:17:38.99:338,39,0	1/1:2,21:24:53.02:446,53,0	0/0:35,0:35:87.19:0,87,949	1/1:2,16:18:38.99:337,39,0	1/1:5,16:21:44.97:391,45,0	1/1:2,18:20:41.26:362,41,0	1/1:3,20:24:53:445,53,0	1/1:3,9:12:23.98:206,24,0	1/1:1,18:19:38.76:336,39,0	1/1:4,16:20:47.66:412,48,0	1/1:4,17:22:49.98:417,50,0	1/1:6,12:19:37.77:304,38,0	0/0:19,0:19:51.12:0,51,554	1/1:3,11:14:31.99:262,32,0	1/1:5,17:22:47.89:414,48,0	1/1:5,14:19:20.88:182,21,0	1/1:3,18:22:46.62:395,47,0	1/1:1,12:13:26.52:232,27,0	1/1:2,18:20:29.62:258,30,0	1/1:3,7:10:20.98:182,21,0	0/0:23,0:23:29.06:0,29,516	1/1:3,8:10:23.98:208,24,0	0/0:13,1:14:23.99:0,24,239
chr10	99383964	.	GATGTGTGTGTGTGTGT	G	4569.71	PASS	AB=0.979;AC=41;AF=0.732;AN=56;BaseQRankSum=3.477;DP=519;FS=2.509;HRun=0;HaplotypeScore=270.2443;InbreedingCoeff=0.6305;MQ=53.74;MQ0=9;MQRankSum=-0.529;QD=12.25;ReadPosRankSum=2.987;VQSLOD=3.4563;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:23.25:0,23,489	1/1:7,0:7:15.04:393,15,0	0/1:40,0:16:19.60:20,0,282	0/0:29,0:15:8.50:0,9,269	1/1:14,1:15:6.99:68,7,0	1/1:13,0:13:20.44:171,20,0	1/1:23,0:23:20.97:243,21,0	0/0:29,0:29:44.96:0,45,764	1/1:16,0:15:20.87:269,21,0	1/1:14,1:15:33.93:472,34,0	1/1:18,1:19:17.97:146,18,0	1/1:19,1:20:4.87:120,5,0	1/1:10,1:11:11.97:261,12,0	1/1:18,0:18:17.41:183,17,0	1/1:19,1:20:8.80:52,9,0	1/1:20,0:21:34.79:702,35,0	0/1:14,0:15:99:331,0,107	0/0:21,0:22:47.84:0,48,2139	1/1:13,0:12:10.22:180,10,0	1/1:17,0:16:20.97:172,21,0	1/1:16,0:16:8.72:66,9,0	0/1:21,0:21:14.03:60,0,14	1/1:11,1:12:15.01:230,15,0	1/1:22,0:22:14:106,14,0	1/1:9,0:8:7.56:67,8,0	0/0:20,0:20:45.10:0,45,1337	1/1:10,0:9:14.97:260,15,0	0/0:12,0:12:36.08:0,36,1077
chr10	99383967	.	GTGTGTGTGTGTGTA	G	5590.11	PASS	AB=0.941;AC=42;AF=0.750;AN=56;BaseQRankSum=2.796;DP=511;FS=4.850;HRun=0;HaplotypeScore=246.6762;InbreedingCoeff=0.7012;MQ=51.75;MQ0=13;MQRankSum=0.053;QD=15.57;ReadPosRankSum=3.220;VQSLOD=3.1065;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:5.02:0,5,267	1/1:5,2:7:15.04:458,15,0	0/1:39,0:15:19.60:20,0,245	0/0:28,0:14:8.46:0,8,222	1/1:12,1:13:7.10:68,7,0	1/1:13,0:12:23.48:244,23,0	1/1:19,2:21:20.97:261,21,0	0/0:35,0:34:59.90:0,60,880	1/1:14,2:15:20.98:333,21,0	1/1:11,2:13:38.91:601,39,0	1/1:15,2:17:17.97:146,18,0	1/1:14,5:19:11.80:151,12,0	1/1:11,0:11:11.97:291,12,0	1/1:14,0:14:20.92:312,21,0	1/1:18,2:20:11.80:76,12,0	1/1:14,7:21:38.87:930,39,0	0/1:13,2:15:85.85:409,0,86	0/0:21,0:21:45.98:0,46,2027	1/1:15,0:13:16.96:195,17,0	1/1:15,3:16:20.97:172,21,0	1/1:17,0:17:8.65:65,9,0	1/1:18,2:20:8.40:71,8,0	1/1:10,2:12:15.01:236,15,0	1/1:20,0:20:14.15:107,14,0	1/1:5,4:8:11.67:87,12,0	0/0:21,0:21:46:0,46,1148	1/1:7,2:8:14.97:359,15,0	0/0:12,0:12:36.08:0,36,851
chr10	99383969	.	GTGTGTGTGTGTA	G	4835.71	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=4.042;DP=498;FS=3.159;HRun=0;HaplotypeScore=230.2733;InbreedingCoeff=0.6242;MQ=51.77;MQ0=13;MQRankSum=-0.085;QD=12.66;ReadPosRankSum=2.749;VQSLOD=3.1156;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:35.31:35,0,103	1/1:7,0:7:15.04:388,15,0	0/1:39,0:15:20.01:20,0,206	0/0:28,0:14:8.81:0,9,198	1/1:13,0:13:7.21:68,7,0	1/1:13,0:12:23.59:196,24,0	1/1:20,0:20:20.97:243,21,0	0/0:35,0:34:59.84:0,60,682	1/1:16,0:15:20.70:281,21,0	1/1:13,0:13:38.91:517,39,0	1/1:16,1:17:17.97:146,18,0	1/1:18,0:18:11.80:132,12,0	1/1:11,0:11:11.97:234,12,0	1/1:13,1:14:20.90:240,21,0	1/1:18,1:19:11.80:76,12,0	1/1:19,1:20:38.86:715,39,0	0/1:15,0:15:66.96:354,0,67	0/0:22,0:22:46.23:0,46,1925	1/1:13,0:11:18.73:194,19,0	1/1:17,1:16:20.97:172,21,0	1/1:14,0:14:8.86:66,9,0	1/1:19,0:19:11.92:96,12,0	1/1:12,0:12:14.99:195,15,0	1/1:19,0:19:14.33:107,14,0	1/1:9,0:8:11.71:87,12,0	0/0:19,0:19:30.13:0,30,863	1/1:9,0:8:14.97:275,15,0	0/0:12,0:12:36.03:0,36,614
chr10	99383975	.	GTGTGTA	G	4422.88	PASS	AB=0.980;AC=46;AF=0.821;AN=56;BaseQRankSum=7.349;DP=513;FS=0.549;HRun=0;HaplotypeScore=201.5952;InbreedingCoeff=0.1809;MQ=48.58;MQ0=15;MQRankSum=-1.724;QD=9.55;ReadPosRankSum=0.329;VQSLOD=3.7215;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,1:36:74.12:117,0,74	1/1:6,2:7:15.04:268,15,0	0/1:37,0:13:20.02:20,0,125	0/0:27,0:13:6.15:0,6,111	1/1:14,0:14:7.19:68,7,0	1/1:13,0:12:23.50:195,24,0	1/1:18,0:18:23.87:223,24,0	0/1:35,0:33:76.29:76,0,243	1/1:16,1:16:15.99:197,16,0	1/1:13,0:13:38.90:421,39,0	1/1:15,0:15:17.97:146,18,0	1/1:18,1:19:4.99:100,5,0	1/1:9,3:12:14.72:187,15,0	1/1:13,3:16:20.64:213,21,0	1/1:15,2:17:11.80:76,12,0	1/1:17,4:21:42.64:506,43,0	0/1:13,1:14:21.18:285,0,21	0/0:23,0:23:31.75:0,32,1080	1/1:13,0:11:25.70:188,26,0	1/1:19,2:19:20.37:171,20,0	1/1:15,0:14:9.24:67,9,0	1/1:15,3:18:11.95:96,12,0	1/1:13,1:13:14.99:157,15,0	1/1:16,3:19:14.26:107,14,0	1/1:12,1:12:10.36:85,10,0	0/1:23,0:23:97.82:98,0,161	1/1:9,1:9:17.91:215,18,0	0/1:12,0:12:37.56:140,0,38
chr10	99383977	.	GTGTA	G	4036.21	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=7.794;DP=503;FS=1.866;HRun=0;HaplotypeScore=188.6743;InbreedingCoeff=0.1968;MQ=48.45;MQ0=16;MQRankSum=-2.320;QD=8.91;ReadPosRankSum=-0.261;VQSLOD=2.4737;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:24.25:24,0,116	1/1:8,0:7:15.03:196,15,0	0/1:34,0:12:20.49:20,0,105	0/0:27,0:13:6.42:0,6,111	1/1:12,2:14:7.27:68,7,0	1/1:13,0:12:23.64:195,24,0	1/1:17,0:17:23.87:206,24,0	0/1:35,0:33:99:152,0,228	1/1:16,0:15:15.63:163,16,0	1/1:14,0:13:38.90:382,39,0	1/1:14,1:15:17.97:146,18,0	1/1:18,0:18:4.93:81,5,0	1/1:11,1:12:14.72:166,15,0	1/1:15,1:16:20.76:178,21,0	1/1:16,1:17:11.80:76,12,0	1/1:21,0:21:42.60:388,43,0	0/1:14,0:14:5.11:228,0,5	0/0:23,0:23:27.71:0,28,780	1/1:10,1:10:25.70:192,26,0	1/1:21,0:19:20.32:171,20,0	1/1:15,0:14:9.64:67,10,0	1/1:15,1:16:11.96:96,12,0	1/1:14,0:13:14.99:147,15,0	1/1:16,2:18:14.13:107,14,0	1/1:13,0:12:10.76:86,11,0	0/1:23,0:23:99:158,0,108	1/1:10,1:10:17.90:162,18,0	0/1:12,0:12:37.34:181,0,37
chr10	99384006	.	TGTGTGA	T	2148.98	PASS	AB=1.000;AC=23;AF=0.442;AN=52;BaseQRankSum=1.332;DP=507;FS=13.154;HRun=0;HaplotypeScore=182.1021;InbreedingCoeff=0.0806;MQ=29.96;MQ0=25;MQRankSum=-0.957;QD=6.82;ReadPosRankSum=2.161;VQSLOD=1.8662;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:36:14.09:155,14,0	1/1:9,0:8:8.93:107,9,0	0/0:13,0:1:3.01:0,3,64	./.	0/0:15,0:14:0:0,0,0	0/0:10,0:9:1.08:0,1,3	1/1:18,0:18:1.43:28,1,0	1/1:13,22:28:38.19:612,38,0	0/1:15,0:14:36.78:37,0,55	0/1:21,0:18:36.44:36,0,232	./.	0/0:16,0:15:2.94:0,3,51	0/1:13,0:13:28.74:74,0,29	1/1:21,0:21:3.67:61,4,0	0/0:18,0:18:1.83:0,2,4	0/1:26,0:26:15.37:157,0,15	0/1:13,0:13:28.77:70,0,29	0/0:19,0:19:51.98:0,52,1137	0/1:13,0:11:16.90:17,0,84	0/0:25,0:22:1.05:0,1,4	0/0:22,0:15:13.04:0,13,90	0/0:17,0:16:0:0,0,0	1/1:22,0:21:3.01:33,3,0	0/0:15,0:15:2.90:0,3,16	0/1:17,0:16:0.14:0,0,2	1/1:13,8:22:11.85:536,12,0	0/1:20,0:18:55.38:55,0,72	0/1:13,0:13:1.53:313,0,2
chr10	99384027	.	GAGAC	G	554.34	PASS	AB=1.000;AC=25;AF=0.500;AN=50;BaseQRankSum=2.826;DP=696;FS=12.821;HRun=0;HaplotypeScore=243.8695;InbreedingCoeff=0.0136;MQ=29.65;MQ0=20;MQRankSum=-1.882;QD=1.15;ReadPosRankSum=-1.786;VQSLOD=0.7438;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,8:30:6.08:25,6,0	0/1:12,0:11:7.39:19,0,7	./.	./.	0/0:31,0:29:0:0,0,0	1/1:24,0:20:2.28:14,2,0	1/1:28,0:28:1.05:5,1,0	0/1:36,0:31:65.47:137,0,65	0/1:24,0:24:2.63:3,0,6	0/0:39,0:37:23.41:0,23,471	0/1:20,0:20:0:1,0,0	0/0:22,0:21:14.12:0,14,57	0/1:21,0:21:18.99:19,0,107	1/1:29,0:28:5.10:46,5,0	0/0:28,0:28:5.58:0,6,36	0/1:36,0:34:15.65:31,0,16	0/1:16,0:16:0.90:1,0,31	0/0:19,0:19:30.08:0,30,881	0/1:28,0:25:30.73:31,0,246	1/1:35,0:33:5.74:30,6,0	0/0:28,0:21:11.37:0,11,128	0/1:28,0:27:0.20:0,0,0	./.	1/1:26,0:23:2.68:11,3,0	0/1:24,0:24:0.01:0,0,0	0/1:24,0:24:67.92:186,0,68	0/1:23,0:21:19.23:19,0,44	0/1:19,0:18:99:113,0,148
chr10	99384029	.	GAC	G	842.98	PASS	AB=0.958;AC=31;AF=0.620;AN=50;BaseQRankSum=2.525;DP=676;FS=2.176;HRun=0;HaplotypeScore=218.9065;InbreedingCoeff=0.0378;MQ=29.53;MQ0=20;MQRankSum=-1.693;QD=1.60;ReadPosRankSum=-0.314;VQSLOD=2.3368;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,6:28:3.01:0,3,30	0/1:9,1:9:8.39:20,0,8	./.	./.	0/0:30,1:29:0:0,0,0	1/1:23,1:20:2.64:16,3,0	1/1:28,0:28:2.34:10,2,0	1/1:34,0:29:14.26:203,14,0	1/1:22,2:24:4.60:19,5,0	0/1:37,1:36:81.77:82,0,209	0/1:17,1:18:0:0,0,0	0/1:21,0:20:9.95:10,0,30	0/1:18,2:20:28.23:28,0,47	1/1:24,4:27:5.50:50,5,0	0/0:26,0:26:5.48:0,5,24	0/1:33,2:33:6.90:50,0,7	0/1:14,0:14:12.01:23,0,12	0/0:19,0:19:29.75:0,30,572	0/1:26,1:24:47.18:47,0,188	1/1:34,1:33:5.80:32,6,0	0/1:28,0:21:2.19:2,0,45	0/1:27,0:26:0:0,0,0	./.	1/1:21,4:22:2.66:15,3,0	0/1:20,3:23:0:0,0,0	1/1:23,1:24:36.56:195,37,0	1/1:21,3:22:3.72:66,4,0	1/1:19,0:18:0.46:106,0,0
chr10	99384041	.	GAC	G	38.79	PASS	AB=0.995;AC=22;AF=0.440;AN=50;BaseQRankSum=3.949;DP=671;FS=9.005;HRun=0;HaplotypeScore=205.0605;InbreedingCoeff=0.3850;MQ=30.25;MQ0=16;MQRankSum=-0.439;QD=0.10;ReadPosRankSum=-4.103;VQSLOD=1.0143;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:28:5.81:47,6,0	0/1:8,0:8:10.83:11,0,14	./.	./.	0/1:34,0:31:0.08:0,0,0	1/1:26,0:22:2.61:15,3,0	1/1:30,0:30:1.68:6,2,0	0/0:31,0:30:55.35:0,55,414	1/1:24,0:24:0.80:6,1,0	0/0:34,1:34:37.46:0,37,692	0/1:19,0:19:0:0,0,0	0/0:21,0:20:15.39:0,15,72	0/0:20,0:20:10.91:0,11,146	1/1:30,0:29:5.16:24,5,0	0/1:24,0:24:13.55:14,0,16	0/0:33,0:31:5.90:0,6,54	0/0:12,2:14:5.65:0,6,64	0/0:15,0:15:24.31:0,24,644	0/0:26,0:23:34.10:0,34,477	1/1:39,0:37:7.59:31,8,0	0/0:26,1:20:14.94:0,15,212	0/1:29,0:28:0:0,0,0	./.	1/1:20,2:19:2.16:8,2,0	0/1:22,1:23:0:0,0,0	0/0:23,0:23:47.92:0,48,501	0/1:24,0:22:1.07:1,0,55	0/1:17,0:16:13.17:13,0,317
chr10	99384043	.	C	CAG	433.50	PASS	AB=0.988;AC=26;AF=0.520;AN=50;BaseQRankSum=5.229;DP=661;FS=0.000;HRun=0;HaplotypeScore=198.5101;InbreedingCoeff=0.1247;MQ=30.65;MQ0=14;MQRankSum=-2.946;QD=0.86;ReadPosRankSum=-0.524;VQSLOD=2.5251;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:27:0.28:1,0,0	0/1:7,0:7:14.50:21,0,14	./.	./.	0/1:33,0:30:0.01:0,0,0	1/1:26,0:22:2.71:33,3,0	1/1:29,0:29:2.99:24,3,0	0/0:29,0:28:33.87:0,34,348	0/1:24,0:24:0.44:0,0,0	0/1:35,0:34:99:233,0,255	1/1:19,0:19:1.38:4,1,0	0/1:22,0:21:22.36:22,0,22	0/1:20,0:20:27.83:28,0,56	0/1:30,1:30:0.30:0,0,0	1/1:23,0:23:6.76:34,7,0	0/1:33,1:32:24.75:26,0,25	0/1:12,1:13:1.44:35,0,1	0/0:14,0:15:18.31:0,18,392	0/1:27,0:24:7.08:7,0,187	1/1:37,0:35:3.66:10,4,0	0/0:28,0:21:14.75:0,15,167	0/1:28,1:28:0.03:0,0,0	./.	1/1:22,0:19:0.92:3,1,0	0/1:20,0:20:0:0,0,0	0/0:23,0:23:37.77:0,38,283	0/1:25,0:23:1.93:80,0,2	0/0:17,0:16:20.43:0,20,159
chr10	99384047	.	G	GAC	820.34	PASS	AB=0.823;AC=20;AF=0.385;AN=52;BaseQRankSum=6.088;DP=642;FS=0.000;HRun=0;HaplotypeScore=175.5053;InbreedingCoeff=0.0510;MQ=31.26;MQ0=15;MQRankSum=-1.637;QD=2.14;ReadPosRankSum=-0.103;VQSLOD=2.4965;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:5.98:0,6,48	0/1:6,1:7:24.71:37,0,25	./.	0/0:9,0:1:2.99:0,3,23	0/1:26,5:28:0.01:0,0,0	1/1:20,6:22:2.71:51,3,0	1/1:19,9:28:3.01:41,3,0	0/0:32,0:30:68.82:0,69,739	0/1:19,5:24:1.17:8,0,1	0/1:22,8:30:99:410,0,362	0/0:15,3:18:2.83:0,3,14	0/1:13,4:16:38.97:39,0,57	0/1:17,5:22:65.54:66,0,66	0/0:21,10:30:5.02:0,5,23	1/1:18,5:23:2.05:9,2,0	0/1:21,11:30:24.39:70,0,24	0/1:10,3:13:44.58:49,0,45	0/0:15,0:15:38.48:0,38,547	0/1:18,1:17:13.87:14,0,359	0/1:27,10:35:9.78:10,0,12	0/0:24,3:21:15.67:0,16,201	0/1:26,3:28:0.03:0,0,0	./.	0/0:13,8:18:0:0,0,1	0/1:12,8:20:0:0,0,0	0/0:23,1:24:63.87:0,64,727	1/1:16,9:23:13.39:156,13,0	0/0:17,0:16:33:0,33,383
chr10	99384051	.	GAGAC	G	521.18	PASS	AB=0.990;AC=29;AF=0.558;AN=52;BaseQRankSum=6.166;DP=627;FS=0.760;HRun=0;HaplotypeScore=174.8054;InbreedingCoeff=0.4186;MQ=31.91;MQ0=11;MQRankSum=-1.593;QD=1.22;ReadPosRankSum=-2.108;VQSLOD=2.1867;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:4.85:52,5,0	1/1:8,0:8:11.23:67,11,0	./.	0/0:8,0:1:3.01:0,3,38	0/1:30,1:28:0.17:0,0,0	1/1:25,2:23:2.68:16,3,0	1/1:25,0:25:2.46:26,2,0	0/0:32,0:30:72.04:0,72,1160	1/1:23,0:23:2.36:18,2,0	0/1:32,0:31:99:183,0,202	1/1:15,1:16:2.96:19,3,0	1/1:16,0:15:16.95:135,17,0	0/0:21,0:21:6.87:0,7,74	1/1:31,0:30:2.23:21,2,0	0/0:24,0:24:8.48:0,8,51	1/1:32,0:30:0.71:9,1,0	0/1:13,0:13:11.11:11,0,63	0/0:15,0:15:38.93:0,39,701	0/1:18,0:16:3.54:4,0,195	1/1:37,0:35:12.84:87,13,0	0/0:27,0:21:9.65:0,10,221	0/1:26,1:27:0.20:0,0,0	./.	0/1:21,0:18:0:0,0,0	0/1:21,0:21:0:0,0,0	0/0:22,0:22:50.84:0,51,965	1/1:24,0:22:4.84:26,5,0	0/0:14,0:13:24.06:0,24,599
chr10	99384053	.	GACAGAC	G	1591.05	PASS	AB=0.959;AC=24;AF=0.462;AN=52;BaseQRankSum=0.485;DP=622;FS=1.499;HRun=0;HaplotypeScore=173.5239;InbreedingCoeff=0.2883;MQ=32.51;MQ0=10;MQRankSum=-1.655;QD=4.02;ReadPosRankSum=-3.331;VQSLOD=1.9672;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:10.51:0,11,35	0/1:7,0:7:2.27:104,0,2	./.	0/0:8,0:1:3:0,3,26	0/1:29,2:28:0.17:0,0,0	1/1:27,0:23:0.05:3,0,0	0/0:20,4:24:2.95:0,3,20	0/0:31,0:31:74.91:0,75,1505	1/1:18,4:22:5.54:73,6,0	0/1:28,5:32:99:463,0,414	1/1:12,4:16:3.01:65,3,0	1/1:11,6:16:16.27:385,16,0	0/0:21,0:21:9.48:0,9,70	1/1:26,3:28:1.77:66,2,0	0/1:25,0:25:2.98:3,0,28	1/1:32,0:30:3.83:65,4,0	0/1:12,0:12:25.60:26,0,40	0/0:15,0:15:38.56:0,39,1102	0/1:18,0:16:94.37:94,0,217	1/1:31,5:36:22.94:381,23,0	0/0:25,2:21:12.84:0,13,343	0/1:27,0:27:0.29:0,0,0	./.	0/1:18,2:17:0:0,0,0	0/1:17,3:20:0:0,0,0	0/0:23,0:23:60.41:0,60,1575	0/1:24,0:22:8.72:9,0,71	0/0:13,0:13:24.03:0,24,842
chr10	99384059	.	C	CAGAGAG	3745.79	PASS	AB=0.770;AC=32;AF=0.593;AN=54;BaseQRankSum=-0.627;DP=602;FS=6.649;HRun=0;HaplotypeScore=156.2288;InbreedingCoeff=0.4841;MQ=36.76;MQ0=9;MQRankSum=-1.556;QD=9.07;ReadPosRankSum=-2.644;VQSLOD=1.5659;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:23:11.81:0,12,99	1/1:6,2:8:3.92:195,4,0	./.	0/0:8,0:4:2.70:0,3,49	1/1:28,2:28:5.56:72,6,0	0/1:11,15:24:0.10:3,0,0	0/0:21,0:23:1.09:0,1,4	0/0:37,0:36:78.11:0,78,1306	1/1:18,2:20:6.15:92,6,0	0/1:30,1:31:38.87:1169,0,39	1/1:14,1:15:2.41:86,2,0	1/1:17,0:16:24.54:557,25,0	1/1:6,12:21:7.27:184,7,0	1/1:25,2:26:3.48:80,3,0	1/1:7,16:23:3.01:34,3,0	1/1:13,17:29:2.73:104,3,0	0/1:9,0:10:18.07:98,0,18	0/0:13,0:13:27.06:0,27,545	1/1:17,0:15:21.02:354,21,0	1/1:35,3:37:36.36:594,36,0	0/0:24,0:20:11.83:0,12,245	0/1:9,18:27:0:0,0,0	1/1:30,0:30:3.01:50,3,0	1/1:15,2:15:0.47:1,0,0	1/1:21,0:21:6.01:73,6,0	0/0:19,0:19:44.88:0,45,854	0/0:11,13:25:4.89:0,5,31	0/0:11,0:11:23.95:0,24,527
chr10	99384730	.	G	GT	909.14	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.571;DP=539;FS=1.476;HRun=8;HaplotypeScore=51.4077;InbreedingCoeff=0.8738;MQ=88.26;MQ0=0;MQRankSum=-4.109;QD=27.55;ReadPosRankSum=1.418;VQSLOD=4.2004;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:87.26:1004,87,0	0/0:10,0:10:30.02:0,30,275	0/0:21,0:21:44.50:0,44,390	0/0:21,0:21:34.23:0,34,288	0/0:26,0:26:78.04:0,78,714	0/0:32,0:32:87.04:0,87,796	0/0:13,0:13:39.02:0,39,357	0/0:28,0:28:72.03:0,72,659	0/0:20,0:20:57.03:0,57,521	0/0:21,1:22:25.39:0,25,480	0/0:30,0:30:84.02:0,84,759	0/0:15,0:15:42.02:0,42,384	0/0:13,0:13:30:0,30,270	0/0:17,0:17:48.03:0,48,439	0/0:13,0:13:36.01:0,36,325	0/0:14,0:14:38.97:0,39,349	0/0:6,0:6:15.01:0,15,137	0/0:16,0:16:36:0,36,329	0/0:26,0:26:63.02:0,63,577	0/0:24,0:24:63.01:0,63,572	0/0:21,0:21:57.01:0,57,516	0/0:13,0:13:33.01:0,33,302	0/0:23,0:24:68.07:0,68,610	0/0:13,0:13:36.02:0,36,330	0/0:23,0:23:60.03:0,60,549	0/0:25,0:25:72.01:0,72,649	0/0:15,1:17:15.45:0,15,383	0/0:3,0:3:5.75:0,6,55
chr10	99385324	.	AT	A	10320.36	PASS	AB=0.897;AC=45;AF=0.804;AN=56;BaseQRankSum=9.606;DP=566;FS=0.000;HRun=9;HaplotypeScore=58.9486;InbreedingCoeff=0.8368;MQ=76.36;MQ0=0;MQRankSum=-3.402;QD=21.68;ReadPosRankSum=4.614;VQSLOD=5.2920;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:63.03:577,63,0	1/1:1,20:21:51.03:467,51,0	0/0:18,0:18:27.48:0,27,362	0/0:8,0:8:12.01:0,12,120	1/1:1,29:31:89.08:802,89,0	1/1:2,21:23:53.60:493,54,0	1/1:2,9:11:27.01:247,27,0	0/0:33,1:34:56.75:0,57,883	1/1:1,10:11:21.01:192,21,0	1/1:1,17:18:51.01:461,51,0	1/1:3,27:30:72.03:659,72,0	1/1:3,14:17:1.39:267,1,0	1/1:0,10:10:30.02:275,30,0	1/1:2,17:19:41.99:377,42,0	1/1:3,16:19:45.02:412,45,0	1/1:4,17:21:48.02:439,48,0	1/1:2,22:24:66.03:604,66,0	0/0:25,0:25:66.16:0,66,740	1/1:1,18:19:53.94:480,54,0	1/1:1,29:30:77.96:699,78,0	1/1:0,9:9:27.01:247,27,0	1/1:1,17:18:51.03:467,51,0	1/1:1,19:20:54.03:494,54,0	1/1:3,16:19:45.02:412,45,0	1/1:1,21:22:54.03:494,54,0	0/1:23,3:26:13.20:13,0,623	1/1:3,30:33:81.04:741,81,0	0/0:4,0:5:14.88:0,15,153
chr10	99385553	.	CAAA	C	1155.53	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.877;DP=594;FS=3.160;HRun=12;HaplotypeScore=93.7422;InbreedingCoeff=0.9712;MQ=70.94;MQ0=0;MQRankSum=-0.765;QD=25.12;ReadPosRankSum=3.321;VQSLOD=3.0450;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,42:46:98.97:1250,99,0	0/0:6,0:7:18.03:0,18,284	0/0:15,0:14:19.53:0,20,425	0/0:13,0:13:15.74:0,16,307	0/0:35,0:38:90.25:0,90,1624	0/0:19,0:19:54.19:0,54,1051	0/0:11,0:12:27.07:0,27,496	0/0:37,0:38:87.28:0,87,1663	0/0:25,0:26:69.21:0,69,1271	0/0:25,0:26:63.19:0,63,1180	0/0:16,0:17:39.09:0,39,653	0/0:21,0:23:60.16:0,60,1098	0/0:16,0:16:45.15:0,45,886	0/0:16,0:16:36.12:0,36,689	0/0:13,0:14:42.12:0,42,749	0/0:18,0:18:54.17:0,54,1015	0/0:29,0:31:78.21:0,78,1387	0/0:14,0:15:42.14:0,42,796	0/0:20,0:20:54.16:0,54,1029	0/0:24,0:27:78.23:0,78,1435	0/0:17,0:18:45.15:0,45,871	0/0:17,0:18:39.11:0,39,718	0/0:19,0:20:57.16:0,57,985	0/0:24,0:24:72.23:0,72,1332	0/0:18,0:19:51.15:0,51,943	0/0:23,0:23:60.15:0,60,1057	0/0:21,0:21:60.21:0,60,1157	0/0:7,0:10:27.09:0,27,484
chr10	99386932	.	AGTGT	A	19565.57	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=8.484;DP=689;FS=11.886;HRun=0;HaplotypeScore=136.7663;InbreedingCoeff=0.9845;MQ=68.67;MQ0=0;MQRankSum=-5.640;QD=37.92;ReadPosRankSum=6.019;VQSLOD=4.5665;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:30:9.03:0,9,154	1/1:0,6:6:15.05:259,15,0	0/0:28,0:28:64.23:0,64,1601	0/0:32,0:27:52.02:0,52,1076	1/1:2,29:30:81.03:1209,81,0	1/1:5,19:25:54.18:909,54,0	1/1:4,16:20:42.14:726,42,0	0/0:28,0:28:57.17:0,57,1273	1/1:2,17:19:45.15:777,45,0	1/1:5,23:28:69.24:1172,69,0	1/1:2,17:19:42.10:680,42,0	1/1:7,17:24:38.87:673,39,0	1/1:5,13:18:33.11:570,33,0	1/1:2,26:28:78.27:1333,78,0	1/1:1,31:32:81.28:1400,81,0	1/1:2,21:23:45.13:778,45,0	1/1:4,32:36:84.29:1452,84,0	0/0:19,0:19:48.16:0,48,1182	1/1:3,8:11:24.06:386,24,0	1/1:4,36:40:99:1645,108,0	1/1:7,37:44:93.32:1607,93,0	1/1:4,8:12:18.02:279,18,0	1/1:6,13:19:42.10:689,42,0	1/1:4,34:38:90.31:1555,90,0	1/1:3,18:22:45.06:690,45,0	0/0:18,0:19:53.97:0,54,1259	1/1:3,18:21:45.15:778,45,0	0/0:14,0:14:36.12:0,36,910
chr10	99388420	.	T	TG	1202.99	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.629;DP=716;FS=0.000;HRun=0;HaplotypeScore=69.9842;InbreedingCoeff=0.9548;MQ=79.75;MQ0=0;MQRankSum=-2.794;QD=38.81;ReadPosRankSum=0.700;VQSLOD=3.9133;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:82.52:1298,83,0	0/0:10,0:10:30.09:0,30,402	0/0:28,0:28:71.75:0,72,890	0/0:22,0:22:37.09:0,37,696	0/0:30,0:30:87.29:0,87,1216	0/0:24,0:24:72.24:0,72,1006	0/0:24,0:24:69.22:0,69,949	0/0:32,0:32:87.29:0,87,1217	0/0:40,0:40:99:0,120,1675	0/0:39,0:39:99:0,114,1550	0/0:27,0:27:81.27:0,81,1133	0/0:24,0:24:72.24:0,72,1006	0/0:30,0:30:87.25:0,87,1192	0/0:20,0:20:60.20:0,60,838	0/0:26,0:26:78.23:0,78,1056	0/0:24,0:24:72.23:0,72,990	0/0:18,0:18:51.17:0,51,713	0/0:4,0:4:12.01:0,12,148	0/0:39,0:39:99:0,117,1594	0/0:30,0:30:87.23:0,87,1144	0/0:34,0:34:96.32:0,96,1341	0/0:33,0:33:93.31:0,93,1299	0/0:24,0:24:72.24:0,72,1007	0/0:12,0:12:36.12:0,36,503	0/0:26,0:26:78.25:0,78,1073	0/0:27,0:27:78.26:0,78,1086	0/0:33,0:33:99:0,99,1351	0/0:5,0:5:15.05:0,15,207
chr10	99389240	.	CA	C	12806.65	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=7.004;DP=545;FS=4.393;HRun=5;HaplotypeScore=77.3370;InbreedingCoeff=0.9981;MQ=84.41;MQ0=0;MQRankSum=-3.136;QD=29.51;ReadPosRankSum=3.880;VQSLOD=5.4696;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,34:38:86.81:1045,87,0	1/1:0,7:7:18.05:204,18,0	0/0:18,0:18:42.13:0,42,543	0/0:16,0:16:42.12:0,42,551	1/1:1,14:15:32.80:374,33,0	1/1:0,21:21:60.17:680,60,0	1/1:3,14:17:39.11:442,39,0	0/0:21,0:21:54.17:0,54,713	1/1:1,15:16:42.12:476,42,0	1/1:0,17:17:48.14:544,48,0	1/1:0,15:15:42.11:467,42,0	1/1:2,22:24:60.17:680,60,0	1/1:0,27:27:75.21:851,75,0	1/1:0,14:14:36.10:408,36,0	1/1:0,17:17:48.14:544,48,0	1/1:0,17:17:45.13:510,45,0	1/1:2,24:26:72.21:817,72,0	0/0:16,0:16:39.13:0,39,533	1/1:3,16:18:42.12:476,42,0	1/1:1,19:20:51.14:578,51,0	1/1:1,21:22:60.17:681,60,0	1/1:1,21:22:60.17:680,60,0	1/1:2,16:18:45.13:510,45,0	1/1:1,23:24:66.19:749,66,0	1/1:0,16:16:48.14:544,48,0	0/0:30,0:30:87.28:0,87,1176	1/1:1,21:22:48.14:544,48,0	0/0:10,0:10:30.09:0,30,394
chr10	99389791	.	TACAC	T	2394.44	PASS	AB=0.825;AC=36;AF=0.692;AN=52;BaseQRankSum=4.449;DP=496;FS=1.591;HRun=0;HaplotypeScore=82.8201;InbreedingCoeff=0.5846;MQ=54.91;MQ0=4;MQRankSum=3.918;QD=7.63;ReadPosRankSum=1.216;VQSLOD=2.0202;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:30:6.29:0,6,117	1/1:2,2:4:2.88:47,3,0	0/0:21,0:13:0:0,0,0	./.	0/1:13,1:15:6.47:34,0,6	1/1:8,7:15:9.03:140,9,0	1/1:17,2:19:5.53:150,6,0	0/0:34,0:34:28.29:0,28,403	1/1:15,3:18:15.03:204,15,0	1/1:15,4:19:6.02:94,6,0	1/1:11,6:17:6.02:94,6,0	1/1:16,5:20:12.12:229,12,0	1/1:3,2:4:3.01:47,3,0	1/1:9,5:13:6.02:92,6,0	1/1:7,9:15:15.05:234,15,0	0/0:19,0:19:27.09:0,27,612	1/1:14,12:26:26.82:386,27,0	0/0:19,0:19:15.03:0,15,274	./.	0/1:16,5:23:1.23:109,0,1	1/1:18,4:22:6.02:94,6,0	1/1:3,7:10:9.03:131,9,0	1/1:17,0:17:3:29,3,0	1/1:7,9:16:15.05:234,15,0	1/1:12,4:15:3.01:47,3,0	0/0:10,0:15:29.57:0,30,414	1/1:11,9:21:11.67:168,12,0	0/0:7,0:14:30.10:0,30,603
chr10	99390130	.	TG	T	8376.37	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=8.781;DP=507;FS=1.931;HRun=2;HaplotypeScore=152.7897;InbreedingCoeff=0.9723;MQ=52.72;MQ0=2;MQRankSum=-9.962;QD=21.64;ReadPosRankSum=3.868;VQSLOD=4.8933;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,9:18:46.33:353,46,0	1/1:1,1:2:6:51,6,0	0/0:15,0:10:13.68:0,14,139	0/0:18,0:14:31.83:0,32,331	1/1:8,15:23:58.93:471,59,0	1/1:7,11:17:44.88:368,45,0	1/1:4,12:16:47.96:413,48,0	0/0:34,0:33:82.16:0,82,887	1/1:4,12:16:44.88:381,45,0	1/1:6,14:20:59.93:515,60,0	1/1:5,18:23:56.68:453,57,0	1/1:3,13:16:44.93:375,45,0	1/1:5,13:18:53.65:411,54,0	1/1:2,7:9:20.98:178,21,0	1/1:6,19:25:69.29:559,69,0	1/1:4,17:21:62.94:530,63,0	1/1:8,11:19:41.80:328,42,0	0/0:18,0:18:50.88:0,51,554	1/1:6,7:12:35.99:315,36,0	1/1:7,31:38:99:849,104,0	1/1:5,6:11:23.80:178,24,0	1/1:5,11:15:41.79:321,42,0	1/1:1,14:15:34.98:278,35,0	1/1:4,8:12:29.57:226,30,0	1/1:5,6:11:26.90:217,27,0	0/0:23,1:24:43.25:0,43,740	1/1:8,18:25:74.77:607,75,0	0/0:11,0:11:22.80:0,23,224
chr10	99390142	.	TTTTTA	T	15933.46	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=11.646;DP=523;FS=1.793;HRun=0;HaplotypeScore=178.5635;InbreedingCoeff=0.9016;MQ=54.65;MQ0=3;MQRankSum=-11.041;QD=40.34;ReadPosRankSum=7.179;VQSLOD=4.8439;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,8:15:32.78:468,33,0	1/1:1,0:1:3.01:58,3,0	0/0:15,0:11:23.05:0,23,351	0/0:17,0:11:31.56:0,32,480	1/1:20,1:21:53.04:792,53,0	1/1:16,1:17:37.39:559,37,0	1/1:21,0:20:42.45:751,42,0	0/0:35,0:33:91.36:0,91,1694	1/1:21,0:21:52.52:836,53,0	1/1:20,0:19:44.94:810,45,0	1/1:21,1:23:65.90:990,66,0	1/1:12,1:13:39.13:737,39,0	1/1:15,0:15:41.94:785,42,0	1/1:8,0:8:23.90:352,24,0	1/1:25,0:24:72.07:1196,72,0	1/1:26,0:26:63.52:1127,64,0	1/1:15,1:16:43.86:639,44,0	0/0:20,0:20:60:0,60,1302	1/1:10,2:11:8.18:415,8,0	1/1:39,0:39:99:1753,106,0	1/1:11,0:10:0.17:108,0,0	1/1:18,0:16:48.10:767,48,0	1/1:15,1:16:47.74:709,48,0	1/1:16,0:16:25.06:418,25,0	1/1:10,1:10:29.62:392,30,0	0/0:30,0:30:29.46:0,29,1692	1/1:29,0:27:80.96:1271,81,0	0/0:11,0:11:21.07:0,21,532
chr10	99390143	.	TTTTA	T	11810.84	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=12.264;DP=517;FS=1.761;HRun=0;HaplotypeScore=183.1214;InbreedingCoeff=0.9305;MQ=54.48;MQ0=3;MQRankSum=-11.478;QD=30.36;ReadPosRankSum=6.376;VQSLOD=4.7965;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:39.52:388,40,0	1/1:0,1:1:3.01:41,3,0	0/0:15,0:11:22.26:0,22,330	0/0:17,0:11:32.44:0,32,388	1/1:6,14:20:56.56:577,57,0	1/1:5,10:15:43.19:453,43,0	1/1:11,11:20:47.74:590,48,0	0/0:36,0:34:93.46:0,93,1456	1/1:9,12:21:55.25:639,55,0	1/1:6,14:19:53.92:623,54,0	1/1:7,16:23:65.86:741,66,0	1/1:1,12:13:39.13:512,39,0	1/1:1,13:14:42.11:522,42,0	1/1:1,7:8:23.93:258,24,0	1/1:9,17:25:75.03:874,75,0	1/1:8,17:25:74.99:863,75,0	1/1:7,10:17:39.86:465,40,0	0/0:20,0:20:59.96:0,60,1101	1/1:7,5:11:5.82:287,6,0	1/1:8,30:38:98.41:1257,98,0	1/1:5,6:10:9.30:110,9,0	1/1:7,11:16:48.05:547,48,0	1/1:3,13:16:45.62:487,46,0	1/1:8,7:15:30.86:375,31,0	1/1:6,5:10:18.28:265,18,0	0/0:28,1:29:44.33:0,44,1419	1/1:10,19:29:81:937,81,0	0/0:11,0:11:21.07:0,21,440
chr10	99390144	.	TTTA	T	9307.30	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=11.950;DP=516;FS=6.387;HRun=0;HaplotypeScore=183.0525;InbreedingCoeff=0.9522;MQ=54.49;MQ0=3;MQRankSum=-10.459;QD=24.05;ReadPosRankSum=6.429;VQSLOD=4.2094;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:39.73:347,40,0	1/1:1,0:1:3.01:32,3,0	0/0:15,0:11:23.18:0,23,307	0/0:16,0:10:26.82:0,27,292	1/1:20,0:20:56.07:492,56,0	1/1:15,0:15:37.89:352,38,0	1/1:20,1:19:48.40:469,48,0	0/0:36,0:34:90.50:0,91,1180	1/1:21,0:21:32.92:484,33,0	1/1:20,0:19:47.19:468,47,0	1/1:22,1:23:62.42:580,62,0	1/1:13,0:13:39.09:403,39,0	1/1:14,0:14:41.87:405,42,0	1/1:8,0:8:17.21:181,17,0	1/1:24,0:25:71.17:670,71,0	1/1:25,0:25:71.08:676,71,0	1/1:17,0:17:38.31:356,38,0	0/0:21,0:21:47.09:0,47,904	1/1:12,0:11:19.18:247,19,0	1/1:35,1:36:99:974,100,0	1/1:11,0:10:10.60:96,11,0	1/1:18,0:16:45.53:413,46,0	1/1:16,0:16:37.28:378,37,0	1/1:14,1:15:31.60:292,32,0	1/1:11,0:10:26.92:258,27,0	0/0:30,0:30:52.94:0,53,1057	1/1:30,0:28:76.96:736,77,0	0/0:11,0:11:21.07:0,21,341
chr10	99390189	.	CCTT	C	17798.87	PASS	AB=0.606;AC=43;AF=0.768;AN=56;BaseQRankSum=9.959;DP=615;FS=3.351;HRun=0;HaplotypeScore=142.5601;InbreedingCoeff=0.8087;MQ=44.08;MQ0=42;MQRankSum=-4.943;QD=37.87;ReadPosRankSum=1.822;VQSLOD=5.7653;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:60.20:979,60,0	1/1:0,1:1:3.01:51,3,0	0/0:21,0:2:5.99:0,6,63	0/0:30,0:1:3:0,3,26	1/1:3,28:31:69.23:1103,69,0	1/1:1,22:23:57.20:970,57,0	0/1:7,13:15:99:447,0,102	0/0:29,0:17:45.14:0,45,952	1/1:1,23:23:66.23:1119,66,0	1/1:4,21:22:63.17:1022,63,0	1/1:2,31:32:78.27:1293,78,0	1/1:3,9:11:27.09:459,27,0	1/1:2,14:16:36.12:613,36,0	1/1:2,12:14:33.11:561,33,0	1/1:0,30:29:75.26:1275,75,0	1/1:5,18:23:54.18:906,54,0	1/1:4,17:21:36.05:579,36,0	0/0:28,0:28:62.52:0,63,1735	1/1:6,9:8:21.03:326,21,0	1/1:3,30:32:81.28:1364,81,0	1/1:1,13:12:27.09:459,27,0	1/1:0,27:26:69.23:1103,69,0	1/1:1,17:18:41.69:658,42,0	1/1:0,17:17:32.29:561,32,0	1/1:0,17:16:48.16:791,48,0	0/0:27,1:28:33.24:0,33,1761	1/1:4,31:33:69.23:1160,69,0	0/0:9,0:8:21.01:0,21,304
chr10	99391219	.	CTG	C	13561.71	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=15.945;DP=578;FS=4.605;HRun=0;HaplotypeScore=217.6565;InbreedingCoeff=0.9951;MQ=69.14;MQ0=3;MQRankSum=-15.946;QD=30.34;ReadPosRankSum=5.206;VQSLOD=5.2300;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,23:31:68.66:785,69,0	1/1:1,7:8:21.07:272,21,0	0/0:19,0:18:33.12:0,33,643	0/0:24,0:23:58.91:0,59,1035	1/1:2,19:21:54.17:688,54,0	1/1:3,15:18:48.15:608,48,0	1/1:2,11:13:30.02:355,30,0	0/0:29,0:29:84.29:0,84,1603	1/1:3,21:23:63.07:753,63,0	1/1:3,19:23:63.17:794,63,0	1/1:5,20:25:66.15:802,66,0	1/1:4,13:16:39.09:475,39,0	1/1:2,22:25:69.22:872,69,0	1/1:0,19:20:57.18:720,57,0	1/1:8,17:25:62.13:730,62,0	1/1:7,19:25:54.17:689,54,0	1/1:1,12:17:44.52:470,45,0	0/0:20,0:20:60.21:0,60,1158	1/1:7,6:12:15.05:190,15,0	1/1:1,31:32:90.29:1148,90,0	1/1:6,7:14:24.55:314,25,0	1/1:2,11:14:39.11:471,39,0	1/1:3,16:19:51.15:640,51,0	1/1:2,13:15:33.05:397,33,0	1/1:0,19:19:57.18:724,57,0	0/0:30,0:30:90.30:0,90,1698	1/1:3,17:20:53.54:664,54,0	0/0:9,0:9:27.09:0,27,517
chr10	99391224	.	GATGTTGA	G	26703.64	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=15.491;DP=520;FS=5.932;HRun=0;HaplotypeScore=210.9319;InbreedingCoeff=0.9951;MQ=71.15;MQ0=2;MQRankSum=-16.238;QD=69.00;ReadPosRankSum=7.201;VQSLOD=4.1289;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:25:68.37:1582,68,0	1/1:0,7:7:21.07:538,21,0	0/0:19,0:18:46.97:0,47,1596	0/0:22,0:21:60.67:0,61,2025	1/1:1,19:20:54.19:1371,54,0	1/1:1,15:16:48.15:1174,48,0	1/1:2,11:12:30.10:755,30,0	0/0:30,0:30:90.27:0,90,3164	1/1:3,21:22:60.16:1482,60,0	1/1:2,18:21:60.21:1530,60,0	1/1:1,20:21:63.19:1535,63,0	1/1:1,13:13:36.12:908,36,0	1/1:1,22:23:69.24:1753,69,0	1/1:1,19:19:57.20:1449,57,0	1/1:1,17:18:51.16:1245,51,0	1/1:0,19:18:54.19:1371,54,0	1/1:4,12:16:47.87:1042,48,0	0/0:21,0:21:63.22:0,63,2511	1/1:0,6:5:15.05:376,15,0	1/1:0,31:31:90.31:2283,90,0	1/1:3,7:9:24.08:622,24,0	1/1:2,11:13:39.13:968,39,0	1/1:1,16:17:48.16:1221,48,0	1/1:2,13:14:30.10:756,30,0	1/1:0,19:19:57.20:1444,57,0	0/0:32,0:32:96.33:0,96,3552	1/1:0,17:17:51.18:1300,51,0	0/0:9,0:9:27.09:0,27,977
chr10	99391230	.	GA	G	12056.21	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=16.188;DP=528;FS=3.899;HRun=1;HaplotypeScore=208.1879;InbreedingCoeff=0.9966;MQ=70.46;MQ0=0;MQRankSum=-16.002;QD=30.07;ReadPosRankSum=6.653;VQSLOD=4.2414;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:26:49.89:611,50,0	1/1:7,0:7:21.06:244,21,0	0/0:18,0:18:54.15:0,54,838	0/0:21,0:21:63.19:0,63,940	1/1:20,0:20:57.14:639,57,0	1/1:15,0:15:45.13:520,45,0	1/1:14,0:13:25.51:285,26,0	0/0:27,0:27:81.28:0,81,1293	1/1:23,0:22:57.64:661,58,0	1/1:21,1:22:63.19:765,63,0	1/1:20,1:21:60.16:675,60,0	1/1:15,0:14:42.07:453,42,0	1/1:24,0:24:72.19:808,72,0	1/1:20,0:19:57.17:660,57,0	1/1:19,0:19:54.13:600,54,0	1/1:19,0:18:54.15:616,54,0	1/1:15,0:15:25.17:329,25,0	0/0:23,0:23:69.20:0,69,1069	1/1:9,0:8:21.04:234,21,0	1/1:31,2:33:93.25:1062,93,0	1/1:12,0:12:27.05:301,27,0	1/1:12,0:12:36:390,36,0	1/1:16,4:20:48.14:550,48,0	1/1:14,1:15:30.07:338,30,0	1/1:20,0:20:60.17:688,60,0	0/0:31,0:31:93.31:0,93,1464	1/1:18,0:18:54.16:629,54,0	0/0:7,0:7:21.07:0,21,336
chr10	99391329	.	AAAG	A	18108.20	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=11.521;DP=622;FS=4.268;HRun=0;HaplotypeScore=134.1133;InbreedingCoeff=0.9984;MQ=74.64;MQ0=0;MQRankSum=-8.224;QD=36.07;ReadPosRankSum=7.277;VQSLOD=5.0566;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,23:28:51.17:808,51,0	1/1:2,10:12:20.74:333,21,0	0/0:24,0:24:63.19:0,63,1255	0/0:26,0:26:50.80:0,51,1162	1/1:2,26:28:72.12:1059,72,0	1/1:2,26:28:72.25:1142,72,0	1/1:3,20:23:48.12:733,48,0	0/0:21,0:21:54.19:0,54,1171	1/1:3,22:24:51.17:808,51,0	1/1:0,38:38:99:1667,111,0	1/1:3,20:23:45.11:686,45,0	1/1:2,18:20:51.17:808,51,0	1/1:2,24:26:66.22:1046,66,0	1/1:1,18:19:48.16:750,48,0	1/1:1,23:24:54.18:856,54,0	1/1:1,16:17:42.14:666,42,0	1/1:2,22:24:60.20:951,60,0	0/0:11,0:11:24.08:0,24,525	1/1:2,12:14:36.07:517,36,0	1/1:2,23:25:63.21:998,63,0	1/1:5,20:25:39.13:618,39,0	1/1:1,20:21:57.19:904,57,0	1/1:4,17:21:36.02:571,36,0	1/1:1,13:14:33.11:523,33,0	1/1:1,22:23:42.14:666,42,0	0/0:25,1:26:27.71:0,28,1515	1/1:1,23:24:63.21:999,63,0	0/0:12,0:12:36.12:0,36,787
chr10	99391618	.	AT	A	12380.18	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=13.251;DP=606;FS=7.544;HRun=7;HaplotypeScore=89.1395;InbreedingCoeff=0.9973;MQ=69.52;MQ0=1;MQRankSum=-1.994;QD=26.57;ReadPosRankSum=5.165;VQSLOD=5.0399;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:20:57.05:563,57,0	1/1:0,15:15:42.10:428,42,0	0/0:19,0:15:45.03:0,45,522	0/0:19,0:17:26.85:0,27,482	1/1:4,29:33:81.17:825,81,0	1/1:2,16:18:48.10:490,48,0	1/1:0,8:8:21.05:214,21,0	0/0:42,0:42:99:0,117,1438	1/1:1,17:18:48.11:490,48,0	1/1:2,19:21:54.12:551,54,0	1/1:2,32:34:87.19:887,87,0	1/1:1,17:18:48.11:490,48,0	1/1:1,17:18:48.11:490,48,0	1/1:0,9:9:24.05:245,24,0	1/1:1,20:21:48.11:490,48,0	1/1:2,27:29:78.18:796,78,0	1/1:2,28:30:75.17:765,75,0	0/0:8,0:8:21.07:0,21,264	1/1:2,17:19:51.09:507,51,0	1/1:3,35:38:96.21:979,96,0	1/1:1,15:16:45.10:459,45,0	1/1:2,24:26:72.12:723,72,0	1/1:1,22:23:57.13:581,57,0	1/1:0,12:12:36.08:367,36,0	1/1:2,10:12:24.05:245,24,0	0/0:32,0:32:81.25:0,81,1009	1/1:0,28:28:78.18:796,78,0	0/0:20,0:20:51.16:0,51,642
chr10	99391923	.	CT	C	1627.94	PASS	AB=0.561;AC=5;AF=0.089;AN=56;BaseQRankSum=10.943;DP=626;FS=0.000;HRun=3;HaplotypeScore=66.5699;InbreedingCoeff=0.7721;MQ=69.67;MQ0=0;MQRankSum=-0.339;QD=27.13;ReadPosRankSum=-2.517;VQSLOD=2.0128;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.12:0,60,789	0/0:10,0:10:30.09:0,30,414	0/0:38,0:35:92.93:0,93,1244	0/0:26,0:21:51.12:0,51,662	0/0:42,0:42:99:0,123,1699	0/0:22,0:22:66.21:0,66,933	0/0:11,0:11:33.11:0,33,475	1/1:3,28:31:84.18:966,84,0	0/0:15,0:15:45.15:0,45,646	0/0:34,0:34:99:0,102,1463	0/0:31,0:31:93.31:0,93,1336	0/0:14,0:14:42.14:0,42,603	0/0:19,0:19:57.18:0,57,802	0/0:11,0:11:33.11:0,33,475	0/0:18,0:18:54.16:0,54,742	0/0:20,0:20:60.19:0,60,848	0/0:32,0:32:96.32:0,96,1379	0/0:19,0:19:57.18:0,57,803	0/0:19,0:19:51.15:0,51,714	0/0:35,0:35:99:0,105,1489	0/0:17,0:17:51.17:0,51,734	0/0:22,0:22:66.22:0,66,948	0/0:24,0:24:66.22:0,66,950	0/0:13,0:13:36.07:0,36,478	0/0:18,0:18:54.18:0,54,776	0/1:5,18:23:73.97:603,0,74	0/0:35,0:35:99:0,105,1511	1/1:0,6:6:15.05:186,15,0
chr10	99394564	.	AACACAC	A	2031.90	PASS	AC=38;AF=0.864;AN=44;BaseQRankSum=0.424;DP=453;FS=1.570;HRun=0;HaplotypeScore=97.3098;InbreedingCoeff=0.3958;MQ=69.25;MQ0=15;MQRankSum=-2.495;QD=6.62;ReadPosRankSum=1.158;VQSLOD=1.5762;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:9.03:0,9,176	./.	./.	./.	1/1:23,2:24:3.01:60,3,0	1/1:18,6:24:11.92:239,12,0	1/1:15,0:16:6.02:119,6,0	./.	1/1:18,1:19:3:60,3,0	1/1:18,2:20:6.91:120,7,0	1/1:6,1:8:3.01:42,3,0	1/1:11,2:12:3.01:60,3,0	1/1:10,0:10:3.01:56,3,0	1/1:11,3:14:9.03:180,9,0	1/1:6,0:9:1.77:4,2,0	1/1:9,0:15:15.05:209,15,0	1/1:17,3:23:20.57:352,21,0	0/0:10,0:16:14.77:0,15,196	./.	1/1:5,1:7:4.42:99,4,0	1/1:18,0:17:2.22:7,2,0	1/1:17,0:17:3.01:60,3,0	1/1:8,5:13:3.01:54,3,0	1/1:15,0:14:3.48:60,3,0	1/1:11,1:17:14.72:196,15,0	./.	1/1:21,3:24:6.66:176,7,0	0/0:3,0:3:3.01:0,3,78
chr10	99395147	.	C	CTT	1617.24	PASS	AB=0.627;AC=35;AF=0.625;AN=56;BaseQRankSum=8.360;DP=491;FS=5.247;HRun=11;HaplotypeScore=80.0303;InbreedingCoeff=0.3077;MQ=65.55;MQ0=1;MQRankSum=-0.674;QD=4.31;ReadPosRankSum=-0.574;VQSLOD=-0.7397;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,1:32:35.86:175,36,0	1/1:1,3:6:7.36:25,7,0	0/0:15,0:13:15.41:0,15,130	0/0:8,0:8:15.79:0,16,129	0/1:10,1:18:34.25:37,0,34	1/1:4,1:14:20.83:114,21,0	0/1:7,0:13:19.62:20,0,41	0/0:27,0:28:49.03:0,49,474	1/1:5,0:18:27.45:95,27,0	1/1:10,0:20:20.33:83,20,0	1/1:5,0:13:17.98:94,18,0	1/1:4,0:14:21.73:73,22,0	1/1:5,0:11:9.98:34,10,0	1/1:4,1:18:23.44:123,23,0	0/1:1,0:10:13.62:27,0,14	1/1:4,0:15:22.33:77,22,0	0/1:8,3:30:40.77:215,0,41	0/0:15,0:15:13.97:0,14,350	0/1:11,0:18:5.37:47,0,5	0/1:6,1:18:28.75:94,0,29	0/1:6,0:13:11.12:34,0,11	0/1:8,0:17:24.52:25,0,40	1/1:7,0:23:28.33:96,28,0	0/1:5,0:20:19.75:73,0,20	1/1:3,1:11:12.99:78,13,0	0/0:30,0:33:32.78:0,33,419	1/1:3,2:19:30.97:173,31,0	0/0:16,0:16:32.80:0,33,388
chr10	99395840	.	ATT	A	7432.35	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=5.602;DP=386;FS=11.332;HRun=10;HaplotypeScore=59.8049;InbreedingCoeff=0.9740;MQ=67.54;MQ0=0;MQRankSum=-2.995;QD=25.28;ReadPosRankSum=4.081;VQSLOD=3.3091;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:66.15:725,66,0	1/1:0,5:5:12.03:134,12,0	0/0:12,0:12:28.85:0,29,398	0/0:10,0:9:14.99:0,15,186	1/1:3,10:14:23.75:246,24,0	1/1:1,13:14:36.09:401,36,0	1/1:1,13:14:33.01:368,33,0	0/0:22,0:22:44.18:0,44,713	1/1:0,12:12:30.08:334,30,0	1/1:1,15:16:45.12:502,45,0	1/1:1,11:12:21.05:234,21,0	1/1:0,10:10:24.06:267,24,0	1/1:1,8:9:24.06:267,24,0	1/1:0,11:11:30.08:334,30,0	1/1:2,17:19:42.10:468,42,0	1/1:0,8:9:20.79:212,21,0	1/1:3,16:17:23.13:433,23,0	0/0:18,0:19:53.67:0,54,809	1/1:5,9:14:24.04:268,24,0	1/1:3,9:12:27.06:300,27,0	1/1:1,8:9:15.04:167,15,0	1/1:0,5:5:12.02:134,12,0	1/1:1,16:16:33.09:368,33,0	1/1:1,7:8:21.06:233,21,0	1/1:1,7:8:18.04:201,18,0	0/0:17,0:20:53.62:0,54,713	1/1:2,28:30:75.20:836,75,0	0/0:8,0:9:27.09:0,27,410
chr10	99396146	.	C	CTT	9593.87	PASS	AB=0.623;AC=29;AF=0.518;AN=56;BaseQRankSum=-4.163;DP=608;FS=5.374;HRun=2;HaplotypeScore=85.0335;InbreedingCoeff=-0.0596;MQ=59.00;MQ0=71;MQRankSum=1.383;QD=24.11;ReadPosRankSum=8.046;VQSLOD=3.0127;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:5,15:17:5.29:577,0,5	0/1:5,5:8:4.93:199,0,5	0/0:44,0:17:16.67:0,17,187	0/0:63,0:17:14.12:0,14,144	0/1:8,22:28:40.09:838,0,40	0/1:5,9:11:22.41:311,0,22	0/1:9,7:12:99:147,0,113	0/0:35,0:16:41.95:0,42,487	1/1:2,15:15:33.11:610,33,0	0/1:7,26:29:89.33:1243,0,89	0/1:12,20:30:30.83:780,0,31	0/1:3,9:11:26.15:254,0,26	1/1:5,7:8:9.03:166,9,0	0/1:1,9:9:27.87:208,0,28	1/1:1,10:11:16.30:280,16,0	1/1:2,10:11:15.05:279,15,0	0/1:8,8:13:7.53:515,0,8	0/0:11,0:11:21.04:0,21,285	0/1:8,7:8:22.45:309,0,22	0/1:6,16:21:82.21:669,0,82	1/1:2,9:8:6.02:89,6,0	0/1:15,9:21:88.04:519,0,88	0/1:22,11:29:99:656,0,128	1/1:5,7:10:12.04:221,12,0	0/1:3,14:15:10.51:481,0,11	0/0:36,1:36:40.12:0,40,1275	1/1:8,11:15:14.99:241,15,0	0/0:20,0:16:45.12:0,45,620
chr10	99396148	.	TCTC	T	7154.98	PASS	AB=0.985;AC=28;AF=0.500;AN=56;BaseQRankSum=-2.691;DP=596;FS=6.791;HRun=0;HaplotypeScore=98.0131;InbreedingCoeff=-0.1793;MQ=56.28;MQ0=71;MQRankSum=1.554;QD=18.11;ReadPosRankSum=8.157;VQSLOD=3.4414;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:18:23.91:515,0,24	0/1:10,0:8:29.06:144,0,29	0/0:39,0:14:16.37:0,16,185	0/0:58,0:15:13.14:0,13,139	0/1:29,0:27:90.93:619,0,91	0/1:13,0:10:43.40:264,0,43	0/1:15,0:11:99:115,0,170	0/0:35,0:16:48.11:0,48,614	1/1:18,0:16:11.17:445,11,0	0/1:33,0:29:99:964,0,150	0/1:32,0:30:85.03:567,0,85	0/1:11,0:10:45.02:191,0,45	0/1:13,0:9:8.94:89,0,9	0/1:10,0:9:29.54:134,0,30	1/1:10,0:10:7.35:197,7,0	1/1:11,0:10:15.03:176,15,0	0/1:14,2:13:24.31:370,0,24	0/0:9,0:9:21.04:0,21,326	0/1:15,0:8:43.45:244,0,43	0/1:21,0:20:99:521,0,185	1/1:11,0:8:5.98:73,6,0	0/1:22,1:21:99:394,0,228	0/1:30,3:29:99:487,0,213	1/1:13,0:11:12.92:171,13,0	0/1:17,0:15:30.46:342,0,30	0/0:38,0:37:74.12:0,74,1822	1/1:19,0:15:12.91:131,13,0	0/0:20,0:16:45.12:0,45,699
chr10	99396340	.	CTCTT	C	11321.52	PASS	AB=0.738;AC=40;AF=0.714;AN=56;BaseQRankSum=7.733;DP=550;FS=10.273;HRun=0;HaplotypeScore=130.2349;InbreedingCoeff=0.6640;MQ=48.86;MQ0=4;MQRankSum=-3.626;QD=27.35;ReadPosRankSum=2.003;VQSLOD=4.3975;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,7:25:42.09:599,42,0	1/1:2,5:7:12.04:185,12,0	0/0:29,0:16:34.17:0,34,509	0/0:26,0:16:4.33:0,4,547	1/1:15,21:34:63.12:997,63,0	1/1:3,6:9:24.08:384,24,0	1/1:3,14:16:18.06:244,18,0	0/0:29,0:28:72.20:0,72,1436	1/1:1,16:17:24.08:421,24,0	1/1:14,10:23:18.40:881,18,0	1/1:15,17:31:81.12:1296,81,0	1/1:3,13:16:24.08:361,24,0	0/1:1,13:14:5.28:446,0,5	1/1:1,9:9:21.07:314,21,0	1/1:3,10:13:23.95:364,24,0	1/1:4,12:16:12.04:203,12,0	0/1:9,1:10:4.89:159,0,5	0/0:17,0:17:48.16:0,48,1159	1/1:7,8:13:24.05:390,24,0	1/1:11,19:30:72.03:1162,72,0	0/1:8,1:9:0.36:100,0,0	1/1:3,26:29:75.24:1058,75,0	1/1:14,7:19:45.09:678,45,0	0/1:8,12:20:39.71:145,0,40	1/1:2,18:20:27.09:443,27,0	0/0:24,1:24:8.29:0,8,1289	1/1:5,17:21:13.16:492,13,0	0/0:10,0:10:30.10:0,30,719
chr10	99396349	.	T	TC	210.16	PASS	AB=0.807;AC=2;AF=0.036;AN=56;BaseQRankSum=1.757;DP=510;FS=48.527;HRun=0;HaplotypeScore=135.6790;InbreedingCoeff=0.0217;MQ=49.96;MQ0=2;MQRankSum=-0.200;QD=7.25;ReadPosRankSum=-3.344;VQSLOD=1.4121;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:50.18:0,50,324	0/0:5,0:5:11.73:0,12,92	0/0:22,0:16:36.63:0,37,407	0/0:23,0:15:35.86:0,36,394	0/0:32,0:32:62.64:0,63,500	0/0:10,0:10:20.50:0,21,207	0/0:14,0:13:16.46:0,16,143	0/0:28,0:26:72.18:0,72,933	0/0:18,0:18:25.44:0,25,146	0/0:19,0:19:29.56:0,30,180	0/0:29,0:29:68.07:0,68,504	0/0:13,0:13:23.70:0,24,195	0/0:15,0:15:28.94:0,29,176	0/0:9,0:9:18.54:0,19,132	0/0:11,0:11:23.28:0,23,154	0/0:12,0:12:10.18:0,10,48	0/0:12,1:13:26.67:0,27,221	0/0:20,0:20:57.14:0,57,747	0/0:13,0:11:17.70:0,18,90	0/0:27,0:27:48.36:0,48,376	0/1:7,1:8:2.10:2,0,16	0/0:28,0:28:73.17:0,73,598	0/0:18,0:18:36.05:0,36,308	0/1:13,8:21:13.98:284,0,14	0/0:19,0:19:29.16:0,29,198	0/0:23,0:23:69.08:0,69,905	0/0:18,0:18:30.28:0,30,180	0/0:12,0:12:36.12:0,36,503
chr10	99396867	.	C	CA	16760.94	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-11.675;DP=671;FS=7.511;HRun=6;HaplotypeScore=59.7226;InbreedingCoeff=0.9976;MQ=83.60;MQ0=0;MQRankSum=-3.670;QD=31.51;ReadPosRankSum=5.425;VQSLOD=4.8915;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:36.81:0,37,448	1/1:2,9:11:21.07:264,21,0	0/0:24,0:24:53.82:0,54,492	0/0:21,0:21:57.12:0,57,574	1/1:4,40:44:99:1575,126,0	1/1:5,28:33:78.25:981,78,0	1/1:5,14:19:30.10:377,30,0	0/0:20,0:20:48.10:0,48,489	1/1:2,21:23:63.20:792,63,0	1/1:8,31:39:90.29:1131,90,0	1/1:3,33:36:96.26:1187,96,0	1/1:1,14:15:42.13:528,42,0	1/1:0,12:12:33.11:415,33,0	1/1:2,14:16:39.12:491,39,0	1/1:2,17:19:45.14:566,45,0	1/1:0,14:14:42.13:528,42,0	1/1:3,22:25:66.21:830,66,0	0/0:8,0:8:18:0,18,174	1/1:1,15:16:45.14:566,45,0	1/1:6,39:45:99:1454,117,0	1/1:2,22:24:60.19:755,60,0	1/1:2,27:29:75.24:943,75,0	1/1:7,21:28:63.16:773,63,0	1/1:3,16:19:45.14:566,45,0	1/1:2,22:24:63.20:792,63,0	0/0:32,0:32:90.20:0,90,918	1/1:6,35:41:99:1245,99,0	0/0:16,0:16:48.11:0,48,490
chr10	99397121	.	CTGTGTGTG	C	9662.43	PASS	AB=0.900;AC=42;AF=0.808;AN=52;BaseQRankSum=7.165;DP=555;FS=2.764;HRun=0;HaplotypeScore=187.6930;InbreedingCoeff=0.6433;MQ=66.32;MQ0=11;MQRankSum=-3.571;QD=20.82;ReadPosRankSum=3.913;VQSLOD=4.4672;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,16:40:21.07:489,21,0	1/1:4,10:14:30.10:732,30,0	./.	0/1:30,0:19:3.92:4,0,80	1/1:14,13:28:24.08:594,24,0	1/1:12,11:24:33.11:827,33,0	1/1:7,3:11:6.02:131,6,0	0/0:19,0:19:16.54:0,17,318	1/1:10,6:16:18.06:415,18,0	1/1:23,11:34:31.39:774,31,0	./.	1/1:6,3:9:6.02:150,6,0	1/1:12,7:20:24.08:577,24,0	1/1:7,8:16:21.04:398,21,0	1/1:7,13:19:39.13:900,39,0	1/1:12,9:21:27:493,27,0	1/1:18,7:25:18.06:450,18,0	0/0:9,0:9:18.06:0,18,586	0/1:12,4:16:16.69:234,0,17	1/1:7,13:21:21:418,21,0	1/1:12,0:12:3:25,3,0	1/1:15,10:25:18.05:451,18,0	1/1:12,10:22:12.04:301,12,0	1/1:8,3:11:3.01:75,3,0	1/1:9,11:22:36.07:717,36,0	0/0:16,0:17:29.30:0,29,785	1/1:15,9:25:21.07:507,21,0	0/0:3,0:3:6.02:0,6,246
chr10	99399423	.	C	CGTGTGTGTGTGTGTGTGT	10753.65	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=2.186;DP=590;FS=0.646;HRun=0;HaplotypeScore=288.4391;InbreedingCoeff=0.6574;MQ=55.83;MQ0=4;MQRankSum=-5.732;QD=22.88;ReadPosRankSum=-1.507;VQSLOD=3.2665;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:29:7.74:121,8,0	1/1:14,2:17:9.03:695,9,0	0/0:31,0:21:20.59:0,21,326	0/1:16,0:10:20.87:21,0,198	1/1:28,0:28:22.97:573,23,0	1/1:19,0:18:15.77:572,16,0	1/1:32,0:31:17.99:659,18,0	0/0:27,0:30:24.40:0,24,1019	1/1:20,0:19:15.05:215,15,0	1/1:17,0:22:30.08:1356,30,0	1/1:11,0:11:6.02:257,6,0	1/1:14,0:14:3.01:195,3,0	1/1:18,0:21:13.56:499,14,0	1/1:19,0:19:6.49:240,6,0	1/1:13,0:14:6.02:430,6,0	1/1:22,1:25:12.04:626,12,0	1/1:16,0:16:9.03:474,9,0	0/0:24,0:24:9.12:0,9,1269	1/1:20,0:20:18.06:618,18,0	1/1:11,0:11:9.02:316,9,0	1/1:40,0:38:18.44:534,18,0	1/1:15,1:18:5.71:488,6,0	1/1:9,0:10:3.01:235,3,0	1/1:24,0:22:15.02:773,15,0	1/1:24,0:23:9.01:127,9,0	0/0:22,0:23:45.11:0,45,1659	1/1:16,0:14:18.04:731,18,0	0/0:10,0:11:14.95:0,15,638
chr10	99401606	.	A	AACACACACAC	6652.38	PASS	AB=0.835;AC=47;AF=0.904;AN=52;BaseQRankSum=-0.720;DP=499;FS=7.180;HRun=0;HaplotypeScore=184.6340;InbreedingCoeff=-0.1961;MQ=54.14;MQ0=6;MQRankSum=-3.920;QD=14.56;ReadPosRankSum=-1.100;VQSLOD=3.1898;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:39:5.84:87,6,0	1/1:4,0:4:6.02:275,6,0	./.	./.	1/1:18,2:21:3.01:148,3,0	1/1:23,2:25:9.03:374,9,0	1/1:22,0:24:9.03:367,9,0	1/1:24,0:24:26.12:316,26,0	1/1:11,0:12:12.04:505,12,0	1/1:17,0:17:29.45:779,29,0	1/1:22,0:22:9.01:116,9,0	1/1:12,2:14:9.03:345,9,0	1/1:17,0:14:8.96:237,9,0	1/1:22,0:21:2.99:23,3,0	1/1:16,2:20:5.68:283,6,0	1/1:9,1:10:6.02:294,6,0	0/1:13,0:16:32.75:158,0,33	0/1:18,0:22:42.93:43,0,423	1/1:23,0:22:25.29:617,25,0	1/1:16,5:21:11.99:592,12,0	1/1:13,0:13:2.99:24,3,0	1/1:14,1:16:2.66:148,3,0	1/1:12,0:12:2.64:24,3,0	0/1:11,0:15:9.52:251,0,10	1/1:14,0:17:2.59:130,3,0	0/1:14,0:17:8.53:374,0,9	0/1:5,0:9:20.16:93,0,20	1/1:3,0:4:4.26:53,4,0
chr10	99402447	.	TC	T	6748.65	PASS	AB=0.754;AC=43;AF=0.768;AN=56;BaseQRankSum=-5.500;DP=436;FS=18.635;HRun=10;HaplotypeScore=53.4226;InbreedingCoeff=0.6516;MQ=81.98;MQ0=1;MQRankSum=-1.434;QD=18.39;ReadPosRankSum=2.619;VQSLOD=3.8270;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,18:27:48.89:454,49,0	1/1:1,9:10:17.94:156,18,0	0/1:18,0:18:0.96:1,0,127	0/0:16,1:15:1.28:0,1,149	0/1:3,5:8:25.23:131,0,25	1/1:3,8:11:20.97:182,21,0	1/1:0,14:14:35.99:312,36,0	0/0:14,0:20:14.62:0,15,96	1/1:1,16:17:44.99:391,45,0	1/1:4,18:22:62.89:536,63,0	1/1:4,15:19:18.52:336,19,0	1/1:1,8:9:23.99:208,24,0	1/1:1,15:16:38.99:338,39,0	1/1:1,15:16:38.99:339,39,0	1/1:1,9:10:23.99:208,24,0	1/1:4,9:13:23.97:208,24,0	1/1:1,11:12:26.99:234,27,0	0/0:2,0:12:22.73:0,23,114	1/1:7,14:21:38.97:338,39,0	1/1:5,17:22:28.08:348,28,0	0/1:5,6:11:15.08:112,0,15	1/1:1,10:11:32.93:274,33,0	1/1:5,16:21:47.97:414,48,0	1/1:4,8:12:4.17:162,4,0	1/1:5,15:20:50.96:440,51,0	0/0:6,0:9:6.73:0,7,49	1/1:0,26:26:71.99:625,72,0	0/0:5,0:11:26:0,26,159
chr10	99404038	.	TC	T	567.11	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.041;DP=628;FS=6.551;HRun=2;HaplotypeScore=57.3865;InbreedingCoeff=0.9997;MQ=91.69;MQ0=0;MQRankSum=-3.799;QD=31.51;ReadPosRankSum=1.726;VQSLOD=3.0288;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:51.17:662,51,0	0/0:15,0:15:45.13:0,45,637	0/0:27,0:27:78.20:0,78,1073	0/0:26,0:26:78.21:0,78,1109	0/0:28,0:28:81.27:0,81,1209	0/0:21,0:21:63.21:0,63,941	0/0:20,0:20:57.18:0,57,834	0/0:33,0:33:87.28:0,87,1265	0/0:20,0:20:60.20:0,60,899	0/0:17,0:17:51.17:0,51,748	0/0:28,0:28:81.27:0,81,1207	0/0:19,0:19:57.19:0,57,854	0/0:26,0:26:78.24:0,78,1126	0/0:20,0:20:60.18:0,60,877	0/0:21,0:21:63.20:0,63,920	0/0:15,0:15:45.15:0,45,674	0/0:14,0:14:42.07:0,42,580	0/0:18,0:17:54.18:0,54,806	0/0:19,0:19:57.15:0,57,811	0/0:39,0:39:99:0,114,1706	0/0:30,0:30:87.29:0,87,1304	0/0:23,0:23:66.21:0,66,967	0/0:36,0:36:99:0,105,1550	0/0:15,0:15:45.15:0,45,673	0/0:22,0:22:63.21:0,63,943	0/0:21,0:21:57.18:0,57,817	0/0:26,0:26:75.25:0,75,1121	0/0:11,0:11:33.11:0,33,494
chr10	99406505	.	CT	C	8623.93	PASS	AB=0.857;AC=45;AF=0.804;AN=56;BaseQRankSum=6.642;DP=569;FS=0.956;HRun=11;HaplotypeScore=58.5148;InbreedingCoeff=0.8474;MQ=71.80;MQ0=0;MQRankSum=-1.201;QD=18.47;ReadPosRankSum=4.288;VQSLOD=5.7534;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:25:64.95:521,65,0	1/1:1,3:4:8.99:74,9,0	0/1:10,2:12:24.65:25,0,154	0/0:16,1:16:7.40:0,7,227	1/1:3,19:22:53.86:438,54,0	1/1:2,14:16:35.95:296,36,0	1/1:6,15:22:46.97:375,47,0	0/0:21,2:23:26.61:0,27,481	1/1:5,13:19:35.55:281,36,0	1/1:3,16:19:47.93:393,48,0	1/1:3,24:27:52.99:504,53,0	1/1:1,18:19:35.96:296,36,0	1/1:3,11:14:29.96:246,30,0	1/1:1,22:24:58.97:474,59,0	1/1:4,17:21:44.94:370,45,0	1/1:5,15:20:41.93:345,42,0	1/1:5,23:28:65.91:542,66,0	0/0:16,1:17:20.46:0,20,417	1/1:5,17:22:50.90:416,51,0	1/1:2,19:21:50.88:414,51,0	1/1:2,20:22:50.94:419,51,0	1/1:3,20:23:56.91:468,57,0	1/1:3,21:24:56.79:468,57,0	1/1:4,15:19:41.94:345,42,0	1/1:3,14:17:38.93:320,39,0	0/0:27,2:30:22.69:0,23,607	1/1:1,25:27:73.95:597,74,0	0/0:15,0:15:12.19:0,12,274
chr10	99406910	.	CGAGAGAGAGAGAGAGAGAGAGAGAGA	C	1515.58	PASS	AB=0.676;AC=1;AF=0.018;AN=56;BaseQRankSum=3.251;DP=471;FS=0.000;HRun=0;HaplotypeScore=259.1806;InbreedingCoeff=-0.0493;MQ=57.29;MQ0=8;MQRankSum=-0.950;QD=60.62;ReadPosRankSum=1.218;VQSLOD=2.4692;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:34:36.12:0,36,2829	0/0:4,0:4:2:0,2,347	0/0:21,0:12:4.88:0,5,988	0/0:35,0:17:32.90:0,33,857	0/0:22,0:25:18.05:0,18,1512	0/0:21,0:20:22.63:0,23,1656	0/0:9,0:9:20.35:0,20,1433	0/0:22,0:22:41.80:0,42,1887	0/0:9,0:14:15.05:0,15,1115	0/0:17,0:17:27.09:0,27,2367	0/0:20,0:21:24.08:0,24,1662	0/0:8,0:8:9.03:0,9,970	0/0:15,0:18:30.07:0,30,2323	0/0:9,0:11:2:0,2,338	0/0:25,0:25:24.08:0,24,2145	0/0:9,0:13:15.05:0,15,1646	0/0:12,0:12:18.53:0,19,1547	0/0:10,0:12:24.08:0,24,1556	0/0:17,0:17:33.11:0,33,3089	0/0:11,0:11:6:0,6,168	0/0:10,0:10:18.06:0,18,798	0/0:8,0:8:15.05:0,15,1121	0/0:17,0:17:27.09:0,27,2388	0/0:14,0:16:12.04:0,12,1076	0/0:14,0:14:18.06:0,18,1224	0/1:13,12:24:99:1590,0,288	0/0:21,0:25:39.13:0,39,3611	0/0:1,0:5:12.04:0,12,722
chr10	99408393	.	G	GCACA	3624.24	PASS	AB=0.762;AC=29;AF=0.558;AN=52;BaseQRankSum=-1.962;DP=671;FS=2.846;HRun=0;HaplotypeScore=136.4361;InbreedingCoeff=0.3807;MQ=56.54;MQ0=23;MQRankSum=-0.132;QD=8.35;ReadPosRankSum=-2.867;VQSLOD=2.6494;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:35:6:67,6,0	1/1:14,1:15:23.80:357,24,0	./.	./.	1/1:9,4:17:6.02:137,6,0	1/1:13,0:26:10.98:49,11,0	0/1:21,7:34:24.52:223,0,25	0/1:19,0:19:19.66:20,0,37	1/1:8,11:20:15.05:333,15,0	1/1:31,0:30:22.51:423,23,0	1/1:16,1:16:11.95:217,12,0	1/1:15,1:17:18.01:289,18,0	0/1:14,10:26:84.15:144,0,84	0/1:11,7:24:38.09:206,0,38	0/0:17,0:19:24.06:0,24,331	1/1:20,0:28:14.08:219,14,0	0/0:33,0:35:48.09:0,48,611	0/0:12,0:19:9.27:0,9,180	0/1:18,0:21:1.37:1,0,98	0/0:12,0:12:9.28:0,9,86	0/0:30,0:32:30.64:0,31,407	0/1:10,8:26:15.94:132,0,16	1/1:8,7:16:8.77:153,9,0	0/1:15,14:33:65.95:408,0,66	1/1:8,8:22:17.19:246,17,0	0/0:23,0:23:3.01:0,3,46	0/0:11,0:17:11.62:0,12,239	0/0:6,0:6:12.04:0,12,181
chr10	99410393	.	CTGTGTGTGTGTGTGTG	C	10435.72	PASS	AB=0.682;AC=40;AF=0.769;AN=52;BaseQRankSum=1.387;DP=561;FS=1.731;HRun=0;HaplotypeScore=197.1153;InbreedingCoeff=0.3080;MQ=58.65;MQ0=17;MQRankSum=-2.609;QD=23.72;ReadPosRankSum=-1.949;VQSLOD=3.5536;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:23:7.84:228,8,0	0/1:4,6:10:11.97:106,0,12	0/0:33,0:8:8.90:0,9,62	0/0:46,0:20:17.41:0,17,114	1/1:13,1:13:11.79:221,12,0	1/1:4,13:17:2.68:133,3,0	./.	1/1:15,16:29:24.72:355,25,0	1/1:8,15:22:14.69:640,15,0	1/1:10,19:28:20.12:738,20,0	1/1:6,12:18:6.02:266,6,0	1/1:4,10:14:14.75:647,15,0	1/1:2,4:6:12.04:532,12,0	0/1:6,20:26:2.02:484,0,2	1/1:5,13:18:18.06:739,18,0	1/1:3,16:19:15.05:661,15,0	0/1:10,14:23:11.83:368,0,12	0/0:9,0:18:21.06:0,21,644	1/1:9,17:26:46.09:790,46,0	1/1:4,14:17:6.02:246,6,0	1/1:24,0:23:3.46:129,3,0	0/1:5,11:16:6.90:648,0,7	1/1:4,7:11:6.02:266,6,0	0/1:20,0:20:6.10:163,0,6	1/1:4,14:18:15.05:666,15,0	0/1:8,7:15:0.07:385,0,0	1/1:2,14:18:24.08:1023,24,0	./.
chr10	99410651	.	A	ATGTGTGTGTGTGTG	6044.50	PASS	AB=0.906;AC=45;AF=0.804;AN=56;BaseQRankSum=1.274;DP=640;FS=2.687;HRun=0;HaplotypeScore=211.0039;InbreedingCoeff=0.3527;MQ=55.05;MQ0=3;MQRankSum=-0.778;QD=10.85;ReadPosRankSum=-3.591;VQSLOD=3.1898;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:21:6.47:59,6,0	1/1:1,7:10:5.98:221,6,0	0/0:18,0:14:34.98:0,35,502	0/1:20,0:11:2.37:2,0,218	1/1:25,0:25:35.87:281,36,0	1/1:1,16:20:3.01:148,3,0	1/1:18,0:17:10.77:136,11,0	0/1:29,0:29:99:185,0,246	0/1:2,12:17:0:0,0,0	1/1:35,0:33:76.54:1587,77,0	1/1:27,0:28:38.16:545,38,0	1/1:3,19:28:6.04:251,6,0	1/1:4,12:22:2.58:156,3,0	1/1:2,18:25:2.50:5,2,0	0/0:5,23:39:1.48:0,1,8	1/1:4,0:23:6.01:70,6,0	1/1:19,0:20:35.84:516,36,0	0/0:25,0:25:68.75:0,69,1870	1/1:0,0:9:27.01:500,27,0	1/1:31,0:31:34.14:343,34,0	1/1:33,0:33:18.83:147,19,0	1/1:3,17:32:0.47:1,0,0	1/1:22,0:22:26.48:335,26,0	1/1:13,0:13:4.42:23,4,0	1/1:1,18:23:0.47:1,0,0	0/1:19,0:19:99:116,0,859	1/1:20,0:20:30.47:397,30,0	0/1:11,0:11:17.33:17,0,56
chr10	99413054	.	AGT	A	12724.07	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=9.136;DP=940;FS=15.104;HRun=0;HaplotypeScore=152.8557;InbreedingCoeff=0.9840;MQ=47.49;MQ0=25;MQRankSum=3.769;QD=16.72;ReadPosRankSum=3.713;VQSLOD=4.3269;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,20:38:45.11:541,45,0	1/1:4,3:7:9.03:117,9,0	0/0:31,0:11:18.46:0,18,242	0/0:31,0:11:19.66:0,20,213	1/1:5,19:23:30.10:390,30,0	1/1:9,17:25:42.08:526,42,0	1/1:11,14:24:27.54:350,28,0	0/0:45,0:41:99:0,101,1482	1/1:12,31:43:65.93:806,66,0	1/1:19,30:47:99:1618,129,0	1/1:18,13:29:57.02:664,57,0	1/1:19,28:46:71.77:834,72,0	1/1:11,23:33:69.16:845,69,0	1/1:14,28:39:48.06:584,48,0	1/1:14,36:50:48:555,48,0	1/1:5,35:39:29.45:345,29,0	1/1:10,8:18:39.08:457,39,0	0/0:33,0:32:84.17:0,84,1321	1/1:7,8:12:33.11:422,33,0	1/1:2,26:28:29.49:367,29,0	1/1:53,29:76:84.17:1028,84,0	1/1:13,31:43:42.02:505,42,0	1/1:9,29:38:57.17:726,57,0	1/1:12,25:36:27.09:351,27,0	1/1:10,12:21:20.96:272,21,0	0/0:23,0:23:57.18:0,57,901	1/1:5,16:21:33.10:420,33,0	0/0:16,0:16:48.14:0,48,780
chr10	99413084	.	AGT	A	8288.73	PASS	AC=44;AF=0.815;AN=54;BaseQRankSum=11.236;DP=927;FS=3.890;HRun=0;HaplotypeScore=159.4528;InbreedingCoeff=0.9284;MQ=45.52;MQ0=33;MQRankSum=3.499;QD=11.11;ReadPosRankSum=0.076;VQSLOD=4.2346;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,20:33:22.01:250,22,0	1/1:0,4:4:3.01:38,3,0	./.	0/0:35,0:7:12.03:0,12,173	1/1:5,22:27:27.07:330,27,0	1/1:8,17:25:27.05:314,27,0	1/1:7,21:25:18.38:216,18,0	0/0:33,0:28:66.08:0,66,1020	1/1:20,37:56:40.99:555,41,0	1/1:12,38:47:99:1514,126,0	1/1:5,12:16:14.94:191,15,0	1/1:12,31:41:28.01:332,28,0	1/1:10,25:34:45.12:549,45,0	1/1:10,25:33:26.92:338,27,0	1/1:13,40:51:19.28:231,19,0	1/1:13,19:31:36.25:457,36,0	1/1:6,18:24:31.35:401,31,0	0/0:33,0:33:89.23:0,89,1439	1/1:2,9:10:27.09:342,27,0	1/1:11,13:24:14.22:189,14,0	1/1:29,67:91:44.10:529,44,0	1/1:10,33:42:33.11:418,33,0	1/1:13,26:38:39.09:464,39,0	1/1:19,10:27:15.02:173,15,0	1/1:2,19:21:11.93:152,12,0	0/0:32,1:32:55.13:0,55,1410	1/1:12,6:17:24.08:304,24,0	0/0:20,1:21:22.03:0,22,888
chr10	99413233	.	G	GT	622.32	PASS	AC=32;AF=1.000;AN=32;DP=53;FS=0.000;HRun=1;HaplotypeScore=17.7329;InbreedingCoeff=-0.1049;MQ=50.15;MQ0=0;QD=14.14;VQSLOD=2.4814;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:2,0:2:2.98:22,3,0	1/1:3,0:3:8.95:68,9,0	./.	1/1:2,0:2:3:28,3,0	1/1:1,0:1:3:25,3,0	1/1:3,0:3:6.01:56,6,0	1/1:1,0:1:3:25,3,0	1/1:5,1:5:11.90:87,12,0	1/1:2,1:3:8.91:63,9,0	./.	1/1:1,0:1:3:25,3,0	1/1:3,0:3:8.79:62,9,0	./.	./.	./.	./.	1/1:6,1:7:11.74:80,12,0	1/1:1,0:1:3:25,3,0	1/1:1,0:1:2.84:14,3,0	./.	./.	1/1:2,1:3:5.72:29,6,0	1/1:1,0:1:3:25,3,0	1/1:2,4:6:12.47:62,12,0
chr10	99417151	.	A	AAAAC	1111.80	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.751;DP=649;FS=1.853;HRun=0;HaplotypeScore=143.8430;InbreedingCoeff=0.8094;MQ=61.80;MQ0=1;MQRankSum=-1.130;QD=48.34;ReadPosRankSum=1.164;VQSLOD=4.6263;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:78.14:0,78,1179	0/0:16,0:16:36.07:0,36,512	0/0:21,0:18:33.04:0,33,457	0/0:22,0:22:36.11:0,36,505	0/0:29,0:29:66.10:0,66,988	0/0:26,0:26:60.16:0,60,951	0/0:28,0:28:51.16:0,51,789	0/0:35,0:35:54.15:0,54,750	0/0:19,0:19:45.03:0,45,649	0/0:30,0:30:66.22:0,66,1054	0/0:25,0:25:57.15:0,57,900	0/0:25,0:25:54.11:0,54,820	0/0:21,0:21:42.11:0,42,658	0/0:25,0:25:63.15:0,63,955	0/0:21,0:21:42.13:0,42,641	0/0:16,0:16:42.14:0,42,686	0/0:30,0:30:69.05:0,69,980	0/0:13,0:13:1.45:0,1,406	0/0:22,0:21:36.08:0,36,515	1/1:7,16:23:51.18:1206,51,0	0/0:10,0:10:18.06:0,18,294	0/0:16,0:16:27.06:0,27,413	0/0:20,0:20:42.07:0,42,629	0/0:27,0:27:21.16:0,21,610	0/0:26,0:26:63.07:0,63,894	0/0:29,0:29:69.18:0,69,1075	0/0:30,0:30:60.06:0,60,843	0/0:10,0:10:27.05:0,27,369
chr10	99418770	.	T	TAA	16076.36	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-8.592;DP=615;FS=7.929;HRun=9;HaplotypeScore=74.6243;InbreedingCoeff=0.9903;MQ=67.74;MQ0=0;MQRankSum=-1.170;QD=31.71;ReadPosRankSum=2.406;VQSLOD=4.7968;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,42:49:99:1596,109,0	1/1:3,6:9:15.05:231,15,0	0/0:19,0:17:41.98:0,42,419	0/0:19,0:20:17.41:0,17,233	1/1:3,24:28:72.20:1055,72,0	1/1:5,26:31:57.19:878,57,0	1/1:7,14:21:36.12:550,36,0	0/0:19,0:20:33:0,33,400	1/1:4,19:23:40.69:605,41,0	1/1:10,14:24:45.12:659,45,0	1/1:2,20:22:57.11:817,57,0	1/1:6,15:21:38.34:556,38,0	1/1:4,20:26:62.70:930,63,0	1/1:3,23:28:62.24:896,62,0	1/1:3,13:16:33.11:508,33,0	1/1:2,18:21:48.16:739,48,0	1/1:3,22:27:59.95:864,60,0	0/0:14,0:14:32.04:0,32,313	1/1:3,23:25:69.22:1024,69,0	1/1:5,18:23:57.06:792,57,0	1/1:3,11:15:27.05:389,27,0	1/1:8,11:19:31.42:436,31,0	1/1:3,12:16:33.11:496,33,0	1/1:1,21:22:57.19:872,57,0	1/1:3,6:10:15.05:213,15,0	0/0:26,0:26:60.08:0,60,616	1/1:4,24:29:63.21:970,63,0	0/0:8,0:8:21.05:0,21,223
chr10	99420934	.	T	TGGG	1198.40	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.464;DP=655;FS=5.843;HRun=7;HaplotypeScore=92.9239;InbreedingCoeff=0.9962;MQ=73.94;MQ0=0;MQRankSum=-1.126;QD=27.87;ReadPosRankSum=0.481;VQSLOD=1.4932;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,31:43:63.22:1293,63,0	0/0:9,0:9:24.05:0,24,293	0/0:15,0:15:42.13:0,42,563	0/0:14,0:14:25.28:0,25,381	0/0:23,0:23:57.17:0,57,777	0/0:23,0:23:57.17:0,57,761	0/0:29,0:29:78.23:0,78,1047	0/0:24,0:24:60.17:0,60,814	0/0:19,0:19:54.18:0,54,736	0/0:27,0:27:75.24:0,75,1024	0/0:23,0:23:66.21:0,66,901	0/0:22,0:22:51.16:0,51,695	0/0:32,0:32:84.27:0,84,1146	0/0:19,0:19:48.01:0,48,629	0/0:25,0:25:60.16:0,60,803	0/0:16,0:16:45.15:0,45,613	0/0:27,0:27:75.23:0,75,1019	0/0:19,0:19:54.13:0,54,716	0/0:22,0:22:51.13:0,51,681	0/0:28,0:28:75.24:0,75,1022	0/0:29,0:29:87.28:0,87,1171	0/0:37,0:37:99:0,105,1398	0/0:22,0:22:60.18:0,60,802	0/0:24,0:24:69.20:0,69,922	0/0:31,0:31:84.25:0,84,1126	0/0:19,0:19:48.14:0,48,643	0/0:22,0:22:60.19:0,60,813	0/0:12,0:12:36.12:0,36,490
chr10	99421662	.	GA	G	17125.01	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=7.672;DP=644;FS=0.000;HRun=2;HaplotypeScore=100.3066;InbreedingCoeff=0.9872;MQ=66.46;MQ0=1;MQRankSum=-1.034;QD=33.64;ReadPosRankSum=7.170;VQSLOD=4.0545;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:84.27:1089,84,0	1/1:0,9:9:21.07:267,21,0	0/0:20,0:17:48.12:0,48,662	0/0:31,1:28:75.05:0,75,992	1/1:0,28:28:72.16:891,72,0	1/1:0,17:17:45.15:584,45,0	1/1:0,23:23:59.71:777,60,0	0/0:43,0:43:99:0,123,1779	1/1:0,16:16:39.13:506,39,0	1/1:1,26:27:81.24:1019,81,0	1/1:0,21:21:54.17:694,54,0	1/1:1,33:34:93.30:1206,93,0	1/1:1,23:24:54.18:701,54,0	1/1:0,26:26:72.23:934,72,0	1/1:0,24:24:60.20:779,60,0	1/1:1,23:24:57.19:740,57,0	1/1:0,34:34:87.28:1129,87,0	0/0:19,0:19:33.23:0,33,738	1/1:0,22:21:53.66:645,54,0	1/1:0,16:16:48.16:622,48,0	1/1:0,42:42:99:1518,117,0	1/1:0,12:12:36.12:464,36,0	1/1:0,19:19:45.14:577,45,0	1/1:0,22:22:54.18:701,54,0	1/1:0,19:19:48.16:622,48,0	0/0:18,0:18:54.18:0,54,808	1/1:0,18:18:51.17:661,51,0	0/0:3,0:3:9.03:0,9,135
chr10	99428311	.	G	GGA	1288.71	PASS	AB=0.667;AC=31;AF=0.674;AN=46;BaseQRankSum=6.045;DP=287;FS=52.460;HRun=0;HaplotypeScore=18.8283;InbreedingCoeff=0.5581;MQ=29.51;MQ0=135;MQRankSum=-3.990;QD=8.48;ReadPosRankSum=2.225;VQSLOD=1.3902;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,2:2:3.01:39,3,0	1/1:0,2:2:6.02:77,6,0	0/0:10,0:4:9.03:0,9,146	0/1:10,0:4:1:1,0,123	./.	1/1:6,5:5:15.05:198,15,0	1/1:10,1:1:2.94:18,3,0	0/0:22,0:12:33.11:0,33,532	1/1:12,1:1:3.01:41,3,0	1/1:0,5:5:15.05:303,15,0	1/1:1,6:7:5.17:58,5,0	0/0:12,1:2:3.01:0,3,49	./.	./.	1/1:5,4:4:3.01:41,3,0	1/1:4,5:5:15.05:199,15,0	1/1:8,1:1:3.01:57,3,0	0/0:23,0:15:45.15:0,45,734	1/1:23,1:1:3.01:58,3,0	1/1:0,4:4:5.97:76,6,0	./.	0/1:0,4:4:0.33:1,0,0	0/1:0,4:4:0:0,0,0	./.	1/1:0,11:11:17.54:210,18,0	0/0:26,0:16:48.12:0,48,739	1/1:2,2:2:3.01:61,3,0	0/0:5,0:4:12.04:0,12,187
chr10	99428391	.	CA	C	7847.88	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=7.343;DP=463;FS=1.486;HRun=10;HaplotypeScore=55.6427;InbreedingCoeff=0.9497;MQ=71.60;MQ0=0;MQRankSum=-4.905;QD=22.42;ReadPosRankSum=2.708;VQSLOD=5.7735;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:75.20:0,75,828	1/1:0,10:10:29.99:260,30,0	0/0:10,2:12:1.01:0,1,230	0/0:12,0:12:19.49:0,19,189	1/1:2,17:20:47:397,47,0	1/1:1,16:17:44.98:391,45,0	1/1:0,13:13:38.99:339,39,0	0/0:18,1:19:16.04:0,16,396	1/1:0,11:11:26.99:234,27,0	1/1:3,10:13:26.99:234,27,0	1/1:1,15:16:44.99:391,45,0	1/1:0,13:13:38.99:338,39,0	1/1:0,15:15:38.99:338,39,0	1/1:1,12:13:35.98:312,36,0	1/1:0,21:21:56.97:495,57,0	1/1:3,25:28:68.95:599,69,0	1/1:1,24:25:68.96:599,69,0	0/0:14,0:14:39.09:0,39,422	1/1:5,17:22:50.98:442,51,0	1/1:2,14:17:41.01:344,41,0	1/1:0,19:19:47.98:417,48,0	1/1:2,11:13:29.98:260,30,0	1/1:0,14:14:38.98:338,39,0	1/1:1,18:19:53.99:469,54,0	1/1:3,14:17:41.97:365,42,0	0/0:20,0:21:62.97:0,63,653	1/1:2,12:14:32.99:286,33,0	0/0:5,0:5:15.04:0,15,166
chr10	99430154	.	CATCT	C	1329.18	PASS	AB=0.743;AC=5;AF=0.100;AN=50;BaseQRankSum=6.848;DP=542;FS=9.047;HRun=0;HaplotypeScore=104.7277;InbreedingCoeff=0.6811;MQ=56.90;MQ0=3;MQRankSum=-2.241;QD=19.26;ReadPosRankSum=-0.975;VQSLOD=2.7395;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:20:34:0,34,765	0/0:8,0:11:12.93:0,13,221	./.	./.	0/0:22,0:22:36.12:0,36,846	0/0:11,0:24:17.19:0,17,220	0/0:10,0:10:9.03:0,9,211	./.	0/0:20,0:20:30.10:0,30,679	0/0:30,0:30:54.14:0,54,1158	0/0:21,0:22:42.14:0,42,960	0/0:15,0:15:30.10:0,30,678	0/0:19,0:19:39.13:0,39,865	0/0:18,0:18:27.09:0,27,632	0/0:22,0:22:39.13:0,39,917	0/0:22,0:22:42.13:0,42,915	0/1:14,9:25:34.05:299,0,34	0/0:11,0:11:18.06:0,18,371	0/0:13,0:12:15.05:0,15,327	0/0:29,1:30:10.70:0,11,1193	0/0:17,0:18:24.08:0,24,564	0/0:16,0:16:27.09:0,27,634	0/0:10,0:15:5.05:0,5,95	0/0:9,0:22:21.05:0,21,284	0/0:8,0:18:18.03:0,18,302	1/1:11,19:29:51.16:784,51,0	0/0:28,0:27:33.10:0,33,728	1/1:5,8:13:24.08:372,24,0
chr10	99430313	.	CATGT	C	13610.69	PASS	AC=50;AF=0.962;AN=52;BaseQRankSum=-1.600;DP=658;FS=2.363;HRun=0;HaplotypeScore=163.2315;InbreedingCoeff=0.6567;MQ=59.06;MQ0=4;MQRankSum=2.539;QD=21.88;ReadPosRankSum=1.360;VQSLOD=4.9204;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:3:28,3,0	1/1:13,0:13:18.02:255,18,0	./.	./.	1/1:30,0:30:57.19:880,57,0	1/1:22,0:22:36.11:544,36,0	1/1:9,0:9:5.98:67,6,0	1/1:41,2:42:12.03:163,12,0	1/1:17,0:17:36.12:554,36,0	1/1:31,0:31:60.20:921,60,0	1/1:31,0:31:42.14:652,42,0	1/1:19,0:19:24.08:376,24,0	1/1:25,0:25:45.14:679,45,0	1/1:21,0:21:33.07:490,33,0	1/1:27,0:27:48.12:719,48,0	1/1:32,0:32:60.14:888,60,0	1/1:11,0:11:11.91:161,12,0	0/0:10,0:10:10.24:0,10,160	1/1:18,0:17:9.03:141,9,0	1/1:33,0:33:42.13:636,42,0	1/1:28,0:28:42.14:658,42,0	1/1:25,0:25:48.12:725,48,0	1/1:30,0:30:42.08:608,42,0	1/1:11,0:11:21.07:323,21,0	1/1:33,0:33:72.20:1101,72,0	1/1:19,18:37:63.21:988,63,0	1/1:44,0:43:42.10:631,42,0	1/1:9,11:19:27.09:423,27,0
chr10	99430318	.	ATG	A	5393.10	PASS	AB=0.723;AC=26;AF=0.464;AN=56;BaseQRankSum=15.776;DP=652;FS=11.179;HRun=0;HaplotypeScore=166.7935;InbreedingCoeff=-0.5337;MQ=58.80;MQ0=9;MQRankSum=3.970;QD=9.40;ReadPosRankSum=10.249;VQSLOD=2.4236;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,3:11:1.34:1,0,101	0/1:9,4:13:62.97:123,0,63	0/0:21,0:14:42.09:0,42,541	0/0:6,0:2:6.02:0,6,86	0/1:13,17:30:94.69:392,0,95	0/1:12,8:19:0.83:275,0,1	0/1:6,4:10:23.19:23,0,77	0/0:40,0:39:91.75:0,92,1272	1/1:5,11:16:1.62:263,2,0	0/1:15,17:31:55.23:403,0,55	0/1:14,17:31:99:275,0,231	0/1:9,8:17:79.08:208,0,79	0/1:10,16:25:73.32:298,0,73	0/1:13,9:22:99:202,0,133	0/1:14,14:28:88.17:310,0,88	0/1:15,17:32:99:375,0,123	0/1:7,5:12:46.32:46,0,82	0/0:10,0:10:24.95:0,25,369	0/1:13,3:15:30.20:30,0,164	0/1:22,9:31:99:260,0,216	0/1:16,13:28:99:315,0,115	0/1:9,16:25:99:313,0,101	0/1:20,12:32:99:253,0,221	0/1:3,8:11:14.38:138,0,14	1/1:8,24:32:22.10:620,22,0	0/1:35,1:36:30.27:30,0,487	0/1:28,14:41:99:237,0,413	0/1:20,0:19:1.62:2,0,229
chr10	99430322	.	ATG	A	5339.77	PASS	AB=0.712;AC=24;AF=0.429;AN=56;BaseQRankSum=15.662;DP=664;FS=8.953;HRun=0;HaplotypeScore=169.0135;InbreedingCoeff=-0.5231;MQ=57.83;MQ0=11;MQRankSum=2.467;QD=9.69;ReadPosRankSum=12.849;VQSLOD=1.8801;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:11:7.68:0,8,113	0/1:8,4:12:67.25:122,0,67	0/0:21,0:12:27.07:0,27,343	0/0:9,0:2:6.02:0,6,86	0/1:13,17:30:96.79:411,0,97	0/1:12,8:19:5.15:254,0,5	0/1:8,3:11:44.03:44,0,78	0/0:39,0:38:82.77:0,83,1140	1/1:6,11:17:0.92:263,1,0	0/1:18,17:34:73.44:400,0,73	0/1:14,17:31:99:297,0,239	0/1:9,8:17:84.13:207,0,84	0/1:11,16:26:76.77:298,0,77	0/1:13,9:22:99:202,0,140	0/1:13,14:27:99:308,0,108	0/1:16,17:33:99:375,0,130	0/1:7,5:12:46.21:46,0,84	0/0:12,0:12:27.91:0,28,380	0/1:13,3:15:30:30,0,171	0/1:22,9:31:99:259,0,228	0/1:16,13:28:99:295,0,123	0/1:9,15:24:99:309,0,114	0/1:19,12:31:99:251,0,231	0/1:4,8:12:15.97:138,0,16	1/1:6,24:30:13.66:567,14,0	0/1:36,1:37:33.26:33,0,457	0/1:33,14:45:99:231,0,461	0/0:21,0:20:1.41:0,1,266
chr10	99430435	.	CTA	C	594.34	PASS	AB=0.930;AC=18;AF=0.321;AN=56;BaseQRankSum=4.095;DP=589;FS=8.559;HRun=0;HaplotypeScore=189.9675;InbreedingCoeff=-0.4620;MQ=53.83;MQ0=6;MQRankSum=-2.813;QD=1.45;ReadPosRankSum=-4.224;VQSLOD=0.8167;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:7.06:0,7,325	0/1:12,1:13:77.08:77,0,174	0/0:10,0:8:19.73:0,20,252	0/0:13,0:9:3.08:0,3,127	0/1:19,0:19:2.85:3,0,535	0/0:20,5:25:12.76:0,13,618	0/1:19,1:19:28.19:28,0,322	0/1:41,3:43:53.05:53,0,1365	0/1:20,0:20:6.95:7,0,281	0/1:37,1:34:99:151,0,673	0/1:11,0:11:5.88:6,0,229	0/1:20,2:21:2.10:2,0,455	0/1:35,0:35:99:106,0,603	0/1:27,1:28:37.18:37,0,613	0/1:23,1:24:59.64:60,0,359	0/1:27,4:31:39.96:40,0,430	0/0:15,0:15:23.20:0,23,436	0/1:16,0:16:24.25:24,0,319	0/0:19,0:18:4.99:0,5,584	0/0:11,0:11:15.05:0,15,237	0/1:16,1:15:13.36:13,0,254	0/1:8,4:12:35.24:35,0,82	0/1:9,3:11:58.24:58,0,149	0/0:22,0:22:17.23:0,17,309	0/1:11,5:16:28.35:28,0,186	0/1:31,1:32:16.42:16,0,935	0/0:33,0:33:31.01:0,31,630	0/0:9,0:7:18.04:0,18,260
chr10	99430437	.	A	ATC	2742.24	PASS	AB=0.881;AC=22;AF=0.393;AN=56;BaseQRankSum=4.254;DP=583;FS=6.924;HRun=0;HaplotypeScore=189.1019;InbreedingCoeff=-0.6325;MQ=53.85;MQ0=6;MQRankSum=-5.112;QD=5.56;ReadPosRankSum=-2.471;VQSLOD=2.1911;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:85.03:85,0,152	0/1:8,5:13:99:150,0,135	0/0:10,0:8:19.73:0,20,252	0/0:13,0:9:6.34:0,6,132	0/0:17,2:19:0.03:0,0,499	0/1:22,3:25:14.49:14,0,485	0/1:18,2:19:99:121,0,312	0/1:39,3:41:99:246,0,1244	0/1:18,1:19:73.14:73,0,244	0/1:23,16:35:99:778,0,460	0/1:7,4:11:5.91:6,0,163	0/1:16,5:20:2.37:2,0,372	0/1:24,13:37:99:313,0,555	0/1:23,5:28:39.67:40,0,471	0/1:21,3:24:62.73:63,0,293	0/1:30,0:30:99:109,0,334	0/0:16,0:16:22.88:0,23,384	0/1:12,2:16:99:217,0,100	0/1:16,0:16:59.54:60,0,417	0/0:11,0:11:15.05:0,15,213	0/1:17,0:15:35.14:35,0,217	0/1:12,0:12:31.24:31,0,83	0/1:7,5:11:82.21:82,0,139	0/0:18,2:20:17.52:0,18,238	0/1:14,1:15:26.08:26,0,166	0/1:30,1:31:99:412,0,402	0/1:34,0:34:27.71:28,0,521	0/1:8,1:7:1:1,0,210
chr10	99430472	.	GTC	G	420.89	PASS	AB=0.935;AC=9;AF=0.161;AN=56;BaseQRankSum=4.280;DP=555;FS=3.519;HRun=0;HaplotypeScore=125.7284;InbreedingCoeff=0.0544;MQ=61.97;MQ0=6;MQRankSum=-1.106;QD=2.42;ReadPosRankSum=-0.293;VQSLOD=2.3265;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,15:25:8.04:367,8,0	0/1:7,1:8:21.13:21,0,149	0/0:35,0:26:32.06:0,32,411	0/1:40,0:23:50.32:50,0,412	0/0:18,1:19:6.17:0,6,565	0/1:17,2:19:23.90:24,0,606	0/0:16,0:15:29.41:0,29,474	0/0:29,0:29:8.67:0,9,436	0/1:16,2:18:74.58:75,0,344	0/0:14,0:13:21.07:0,21,332	0/0:12,0:12:30.09:0,30,449	0/0:18,0:18:39.13:0,39,613	0/0:22,1:23:18.22:0,18,768	0/0:27,0:27:51.16:0,51,777	0/0:20,0:20:36.12:0,36,564	0/0:12,0:32:68.55:0,69,707	0/0:21,0:21:29.28:0,29,429	0/0:15,0:15:30.10:0,30,460	0/1:13,1:14:2.82:3,0,434	0/0:12,1:11:29.89:0,30,434	0/1:20,1:20:2.89:3,0,563	0/0:9,0:9:18.05:0,18,246	0/0:8,0:8:24.08:0,24,344	0/0:22,1:23:5.99:0,6,569	0/0:16,0:16:32.28:0,32,459	0/0:25,1:26:33.19:0,33,946	0/1:28,1:29:8.27:8,0,837	0/0:5,0:5:15.05:0,15,240
chr10	99430688	.	CAT	C	690.75	PASS	AB=0.843;AC=17;AF=0.500;AN=34;BaseQRankSum=2.299;DP=171;FS=1.152;HRun=0;HaplotypeScore=27.8262;InbreedingCoeff=-0.1081;MQ=77.00;MQ0=4;MQRankSum=-0.702;QD=6.77;ReadPosRankSum=2.087;VQSLOD=2.4590;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:4:6:0,6,70	./.	0/0:25,0:12:3.47:0,3,26	./.	0/0:3,0:3:3.01:0,3,46	./.	0/1:27,5:34:90.47:155,0,90	./.	0/1:6,1:7:25.42:25,0,65	1/1:2,1:3:3.01:34,3,0	./.	./.	./.	./.	1/1:3,2:5:3.01:34,3,0	0/1:8,5:16:16.36:197,0,16	0/1:2,0:2:28.04:28,0,38	0/1:4,0:4:3.02:3,0,33	0/0:3,0:3:3.01:0,3,46	0/0:3,0:3:3.01:0,3,46	./.	./.	1/1:0,1:1:3.01:34,3,0	0/1:5,2:7:13.31:67,0,13	1/1:4,3:7:5.99:58,6,0	0/1:6,3:9:68.04:68,0,76	1/1:2,5:6:9.03:103,9,0
chr10	99431410	.	A	AC	23178.05	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-12.805;DP=716;FS=2.069;HRun=1;HaplotypeScore=75.8754;InbreedingCoeff=0.9997;MQ=87.14;MQ0=0;MQRankSum=-3.549;QD=39.82;ReadPosRankSum=4.915;VQSLOD=5.3612;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:44:99:1708,114,0	1/1:1,11:12:30.10:450,30,0	0/0:25,0:25:70.93:0,71,869	0/0:21,0:23:28.13:0,28,595	1/1:1,31:32:87.25:1264,87,0	1/1:0,21:20:57.19:854,57,0	1/1:1,24:25:51.14:929,51,0	0/0:29,0:29:87.27:0,87,1107	1/1:1,21:22:66.22:971,66,0	1/1:3,36:39:99:1501,108,0	1/1:1,42:43:99:1661,111,0	1/1:0,20:20:57.06:854,57,0	1/1:0,29:29:84.26:1236,84,0	1/1:1,34:35:99:1529,102,0	1/1:0,20:20:48.16:720,48,0	1/1:0,19:19:57.19:854,57,0	1/1:0,22:22:66.22:989,66,0	0/0:13,0:12:36.12:0,36,467	1/1:0,20:20:60.20:891,60,0	1/1:2,20:22:60.03:798,60,0	1/1:3,26:29:84.26:1219,84,0	1/1:1,25:26:63.21:943,63,0	1/1:1,29:30:72.24:1077,72,0	1/1:1,16:17:39.13:585,39,0	1/1:1,21:22:60.20:887,60,0	0/0:22,0:22:63.20:0,63,807	1/1:0,33:33:84.28:1258,84,0	0/0:22,0:22:66.21:0,66,857
chr10	99431519	.	T	TA	18811.84	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-1.453;DP=611;FS=6.831;HRun=2;HaplotypeScore=99.6276;InbreedingCoeff=0.9989;MQ=92.89;MQ0=0;MQRankSum=-5.253;QD=40.90;ReadPosRankSum=5.315;VQSLOD=3.9978;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:39.13:584,39,0	1/1:0,12:12:30.10:450,30,0	0/0:23,0:23:60.19:0,60,758	0/0:31,0:31:88.28:0,88,1099	1/1:1,25:26:72.20:1054,72,0	1/1:0,19:19:51.17:764,51,0	1/1:2,22:24:66.22:989,66,0	0/0:36,0:36:99:0,99,1285	1/1:1,18:19:48.16:720,48,0	1/1:0,19:19:57.18:835,57,0	1/1:2,9:11:24.08:360,24,0	1/1:0,24:24:63.21:944,63,0	1/1:0,27:27:81.27:1214,81,0	1/1:0,21:21:57.19:855,57,0	1/1:2,24:26:72.24:1079,72,0	1/1:1,24:25:72.24:1079,72,0	1/1:1,15:16:45.15:673,45,0	0/0:20,0:20:55.70:0,56,685	1/1:2,17:19:57.14:809,57,0	1/1:0,19:19:54.18:800,54,0	1/1:0,29:29:81.27:1214,81,0	1/1:1,9:10:24.08:360,24,0	1/1:0,18:19:51.17:757,51,0	1/1:0,25:25:66.22:989,66,0	1/1:0,25:25:75.25:1114,75,0	0/0:23,1:24:27.26:0,27,851	1/1:1,29:30:78.26:1169,78,0	0/0:17,0:17:51.17:0,51,662
chr10	99433150	.	TA	T	900.21	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.163;DP=575;FS=16.297;HRun=8;HaplotypeScore=54.2338;InbreedingCoeff=0.7714;MQ=60.65;MQ0=2;MQRankSum=0.548;QD=19.15;ReadPosRankSum=2.198;VQSLOD=2.2812;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,42:47:89.13:995,89,0	0/0:8,0:8:24.05:0,24,275	0/0:8,0:5:11.88:0,12,103	0/0:3,0:1:0.47:0,0,1	0/0:38,0:38:99:0,102,1221	0/0:16,0:16:45.12:0,45,530	0/0:14,0:14:30.09:0,30,362	0/0:32,0:31:84.19:0,84,967	0/0:16,0:16:36.11:0,36,434	0/0:30,0:29:78.22:0,78,916	0/0:25,0:25:66.17:0,66,766	0/0:8,0:8:18.06:0,18,217	0/0:17,0:17:42.12:0,42,494	0/0:16,0:16:42.13:0,42,507	0/0:22,0:22:51.14:0,51,605	0/0:15,0:15:45.13:0,45,532	0/0:28,0:28:69.19:0,69,819	0/0:28,0:28:60.18:0,60,725	0/0:16,0:15:36.10:0,36,425	0/0:28,0:28:75.23:0,75,905	0/0:7,0:7:3.77:0,4,134	0/0:11,0:11:33.07:0,33,365	0/0:20,0:20:54.16:0,54,643	0/0:19,0:19:51.13:0,51,594	0/0:29,0:29:84.25:0,84,1004	0/0:26,0:25:63.18:0,63,742	0/0:29,0:28:81.21:0,81,943	0/0:19,0:19:51.16:0,51,616
chr10	99434801	.	C	CT	8631.91	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-6.021;DP=543;FS=2.262;HRun=7;HaplotypeScore=65.5489;InbreedingCoeff=0.7932;MQ=75.39;MQ0=5;MQRankSum=-0.083;QD=19.01;ReadPosRankSum=2.651;VQSLOD=4.7267;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:6.44:0,6,128	1/1:5,5:10:21.52:234,22,0	0/0:27,0:12:13.87:0,14,88	0/1:18,0:14:28.66:29,0,48	1/1:2,18:20:38.98:420,39,0	1/1:3,24:27:42.13:507,42,0	1/1:4,12:16:39.11:460,39,0	1/1:32,0:32:22.52:176,23,0	1/1:1,19:20:48.15:579,48,0	1/1:1,12:13:36.07:398,36,0	1/1:3,12:15:32.97:347,33,0	1/1:3,10:13:18.06:217,18,0	1/1:3,14:18:18.89:260,19,0	1/1:3,8:11:27.07:316,27,0	1/1:2,22:24:51.15:607,51,0	1/1:3,18:21:45.14:542,45,0	1/1:2,20:22:48.15:579,48,0	0/0:23,0:23:47.98:0,48,445	1/1:7,23:30:69.09:717,69,0	1/1:4,15:19:24:258,24,0	1/1:8,6:14:33:352,33,0	1/1:4,5:9:12.04:145,12,0	1/1:1,16:17:29.57:361,30,0	1/1:4,13:17:30.09:362,30,0	1/1:8,7:15:33.06:366,33,0	1/1:31,0:31:21.75:91,22,0	1/1:2,19:21:27.04:309,27,0	0/0:12,0:12:6.62:0,7,15
chr10	99434808	.	T	TG	1620.04	PASS	AB=0.996;AC=29;AF=0.518;AN=56;BaseQRankSum=2.387;DP=540;FS=18.752;HRun=10;HaplotypeScore=86.4536;InbreedingCoeff=-0.2148;MQ=72.62;MQ0=6;MQRankSum=2.032;QD=3.88;ReadPosRankSum=8.538;VQSLOD=-0.6168;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,9:25:20.84:173,21,0	0/1:11,0:11:29.01:29,0,63	0/0:31,0:12:4.08:0,4,68	0/1:23,0:15:15.05:15,0,56	0/1:22,0:22:54.47:63,0,54	0/1:33,0:33:58.02:93,0,58	1/1:12,0:13:33.22:138,33,0	0/0:29,0:29:64.24:0,64,487	1/1:20,0:20:24.21:155,24,0	0/1:16,0:16:49.83:50,0,58	0/1:14,0:15:16.11:60,0,16	0/1:12,0:12:13.41:49,0,13	0/1:17,0:17:28.64:53,0,29	0/1:13,0:13:49.03:49,0,52	0/1:28,0:26:28.47:114,0,28	1/1:19,0:19:18.06:126,18,0	1/1:21,0:21:25.66:140,26,0	0/0:23,0:24:58.51:0,59,436	0/1:25,0:25:28.92:72,0,29	0/1:17,0:17:44.07:44,0,90	0/1:13,0:13:24.66:51,0,25	1/1:5,0:5:10.04:38,10,0	0/1:19,0:19:14.45:71,0,14	0/1:15,0:15:4.46:75,0,4	0/1:14,0:14:16.72:74,0,17	0/0:29,0:29:78.95:0,79,609	0/1:21,0:21:16.28:66,0,16	0/0:10,0:10:26.97:0,27,221
chr10	99436406	.	GCTAA	G	25423.48	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=6.845;DP=673;FS=14.947;HRun=0;HaplotypeScore=133.4129;InbreedingCoeff=0.9991;MQ=90.26;MQ0=0;MQRankSum=-9.437;QD=48.43;ReadPosRankSum=7.508;VQSLOD=4.3833;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:51.17:968,51,0	1/1:1,17:18:45.15:837,45,0	0/0:33,0:33:90.28:0,90,2218	0/0:25,0:25:68.68:0,69,1570	1/1:1,25:26:60.20:1084,60,0	1/1:1,20:21:51.17:968,51,0	1/1:0,25:24:66.23:1253,66,0	0/0:30,0:30:78.26:0,78,2050	1/1:1,18:19:45.15:855,45,0	1/1:3,31:34:96.33:1807,96,0	1/1:0,25:25:72.25:1367,72,0	1/1:0,16:16:45.15:854,45,0	1/1:0,30:30:87.30:1632,87,0	1/1:3,18:21:48.16:912,48,0	1/1:0,23:23:60.21:1139,60,0	1/1:0,15:15:33.11:626,33,0	1/1:0,17:17:42.14:782,42,0	0/0:16,0:16:48.16:0,48,1296	1/1:0,21:19:57.19:1047,57,0	1/1:2,30:32:81.28:1503,81,0	1/1:1,19:20:48.16:911,48,0	1/1:0,27:27:78.27:1463,78,0	1/1:3,25:28:57.20:1081,57,0	1/1:0,24:24:60.21:1139,60,0	1/1:1,31:32:93.32:1714,93,0	0/0:37,0:37:99:0,111,2997	1/1:1,28:29:78.27:1480,78,0	0/0:7,0:7:21.07:0,21,566
chr10	99436976	.	G	GA	511.83	PASS	AB=0.899;AC=4;AF=0.071;AN=56;BaseQRankSum=-4.420;DP=539;FS=6.900;HRun=9;HaplotypeScore=59.9823;InbreedingCoeff=0.4697;MQ=71.50;MQ0=0;MQRankSum=-2.078;QD=12.19;ReadPosRankSum=-0.874;VQSLOD=2.5909;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:54.15:597,54,0	0/1:6,1:7:18.22:18,0,84	0/0:6,0:7:10.99:0,11,83	0/0:10,0:11:18.15:0,18,170	0/0:33,0:33:80.95:0,81,699	0/0:14,0:14:32.99:0,33,286	0/0:18,0:19:16.64:0,17,294	0/0:26,0:28:73.02:0,73,606	0/0:17,0:17:35.98:0,36,313	0/0:26,0:26:71.98:0,72,625	0/0:12,0:12:32.99:0,33,287	0/0:14,0:14:35.99:0,36,313	0/0:15,0:15:44.99:0,45,391	0/0:14,0:14:38.99:0,39,339	0/0:25,0:25:65.98:0,66,573	0/0:19,0:19:50.97:0,51,443	0/0:20,0:21:50:0,50,423	0/0:9,0:9:14.99:0,15,130	0/0:13,0:14:38.03:0,38,318	0/0:27,0:27:68.98:0,69,599	0/0:10,0:11:32.03:0,32,266	0/0:22,0:22:50.98:0,51,442	0/0:37,1:38:71.78:0,72,848	0/1:11,1:12:6.46:6,0,181	0/0:24,0:24:65.97:0,66,570	0/0:29,0:30:68:0,68,576	0/0:32,0:32:74.95:0,75,651	0/0:15,0:15:38.99:0,39,339
chr10	99437378	.	AT	A	8944.90	PASS	AB=0.799;AC=43;AF=0.768;AN=56;BaseQRankSum=9.532;DP=629;FS=1.892;HRun=11;HaplotypeScore=65.0927;InbreedingCoeff=0.7631;MQ=67.16;MQ0=1;MQRankSum=1.562;QD=17.17;ReadPosRankSum=3.731;VQSLOD=5.9257;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:22:47.93:0,48,485	1/1:1,6:7:17.98:148,18,0	0/1:13,1:11:3.61:4,0,158	0/1:9,1:9:6.68:7,0,116	1/1:4,35:40:39.92:730,40,0	1/1:3,17:20:18.99:362,19,0	1/1:7,18:26:28.81:376,29,0	0/0:29,1:30:41.52:0,42,635	1/1:2,15:17:38.95:320,39,0	1/1:6,28:35:85.89:692,86,0	1/1:3,22:25:27.91:436,28,0	1/1:3,14:17:38.95:320,39,0	1/1:0,20:20:53.94:443,54,0	1/1:1,16:17:38.94:320,39,0	1/1:3,21:25:52.96:425,53,0	1/1:2,32:34:77.91:640,78,0	1/1:5,19:24:46.90:371,47,0	0/0:20,0:20:50.98:0,51,485	1/1:4,11:15:32.92:268,33,0	1/1:5,29:36:58.97:669,59,0	1/1:0,17:17:47.93:391,48,0	1/1:5,19:24:15.74:326,16,0	0/1:5,20:25:6.80:319,0,7	1/1:3,22:26:61.96:499,62,0	1/1:1,23:24:56.93:468,57,0	0/0:20,0:20:33.08:0,33,352	1/1:3,20:23:24.97:411,25,0	0/0:16,0:16:27.07:0,27,288
chr10	99438922	.	CTT	C	7538.95	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=8.285;DP=345;FS=32.455;HRun=5;HaplotypeScore=45.6211;InbreedingCoeff=0.9220;MQ=72.36;MQ0=0;MQRankSum=0.698;QD=34.90;ReadPosRankSum=4.221;VQSLOD=2.9126;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.23:0,66,1203	1/1:0,5:5:15.05:210,15,0	0/0:7,0:6:15.94:0,16,270	0/0:13,0:12:16.44:0,16,350	1/1:0,16:16:48.13:651,48,0	1/1:2,12:14:25.07:451,25,0	1/1:0,5:5:15.05:210,15,0	0/0:40,0:40:99:0,102,1797	1/1:0,7:7:18.06:252,18,0	1/1:0,15:15:39.12:530,39,0	1/1:1,11:12:24.08:336,24,0	1/1:0,2:2:6.02:84,6,0	1/1:1,9:10:18.06:252,18,0	1/1:0,8:8:21.07:294,21,0	1/1:0,10:10:24.08:336,24,0	1/1:1,6:7:18.06:252,18,0	1/1:1,22:23:52.96:791,53,0	0/0:21,0:21:60.21:0,60,1087	1/1:1,15:16:45.15:629,45,0	1/1:0,12:12:33.11:458,33,0	1/1:0,6:6:18.06:252,18,0	1/1:0,1:1:3.01:42,3,0	1/1:2,9:11:27.09:378,27,0	1/1:0,5:5:9.03:125,9,0	1/1:2,11:13:24.08:336,24,0	0/0:15,0:15:39.13:0,39,711	1/1:0,18:18:48.16:671,48,0	0/0:7,0:7:21.07:0,21,385
chr10	99440493	.	GGTGTGT	G	1877.10	PASS	AB=0.883;AC=39;AF=0.750;AN=52;BaseQRankSum=-0.102;DP=601;FS=12.464;HRun=0;HaplotypeScore=121.6280;InbreedingCoeff=0.0916;MQ=73.26;MQ0=13;MQRankSum=-0.791;QD=4.13;ReadPosRankSum=-0.177;VQSLOD=1.0759;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:5.88:48,6,0	1/1:7,0:11:8.81:92,9,0	./.	./.	1/1:9,4:13:0.43:0,0,0	0/1:12,6:18:8.77:55,0,9	1/1:13,9:22:8.50:88,9,0	0/0:24,0:23:5.77:0,6,34	1/1:10,0:13:6.91:88,7,0	1/1:13,5:17:5.59:63,6,0	0/1:14,0:14:19.28:19,0,19	0/1:16,6:24:29.38:51,0,29	1/1:9,6:16:6.02:90,6,0	1/1:10,7:17:6.02:98,6,0	1/1:17,5:21:5.81:72,6,0	0/0:22,0:22:16.44:0,16,165	1/1:30,3:32:27.47:351,27,0	1/1:19,0:18:8.93:77,9,0	0/1:17,0:17:18.28:42,0,18	1/1:10,1:11:11.18:100,11,0	1/1:54,0:52:32.06:267,32,0	0/1:14,4:17:5.97:91,0,6	0/0:11,6:17:0:0,0,0	0/1:27,0:28:2.68:106,0,3	1/1:10,7:16:5.77:111,6,0	1/1:18,0:18:0.46:1,0,0	1/1:9,8:17:1.01:57,1,0	0/1:8,1:9:30.79:49,0,31
chr10	99440701	.	CTGTG	C	4623.95	PASS	AB=0.902;AC=44;AF=0.786;AN=56;BaseQRankSum=4.278;DP=662;FS=23.677;HRun=0;HaplotypeScore=137.6845;InbreedingCoeff=0.3219;MQ=67.03;MQ0=12;MQRankSum=2.335;QD=8.71;ReadPosRankSum=5.287;VQSLOD=2.1792;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:26:6.01:56,6,0	1/1:2,3:5:12.04:181,12,0	0/0:32,0:18:3.01:0,3,45	0/0:45,0:29:6.49:0,6,108	1/1:13,4:17:9.03:142,9,0	1/1:13,7:22:6.02:95,6,0	1/1:21,12:35:1.77:353,2,0	0/0:32,0:28:29.86:0,30,540	1/1:18,5:24:17.64:217,18,0	1/1:12,3:15:9.03:142,9,0	1/1:5,2:8:3.01:47,3,0	1/1:16,13:30:26.21:424,26,0	1/1:13,5:18:12.04:188,12,0	1/1:8,7:15:3.01:47,3,0	1/1:11,12:25:21.03:304,21,0	0/1:29,1:32:19.44:19,0,1133	1/1:18,21:41:35.93:1035,36,0	0/1:21,1:22:14.26:14,0,602	1/1:7,3:10:3.01:47,3,0	0/1:9,4:14:7.08:41,0,7	1/1:34,13:47:17.89:284,18,0	1/1:24,6:30:6.48:88,6,0	1/1:15,6:21:3.01:48,3,0	1/1:14,16:33:29.67:602,30,0	1/1:11,4:15:6.02:95,6,0	0/0:18,0:22:26.36:0,26,395	1/1:10,9:19:8.51:142,9,0	0/1:5,0:5:11.70:12,0,113
chr10	99441164	.	CAGG	C	618.35	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.906;DP=623;FS=5.112;HRun=0;HaplotypeScore=85.4329;InbreedingCoeff=0.9959;MQ=87.49;MQ0=0;MQRankSum=-3.033;QD=29.45;ReadPosRankSum=2.108;VQSLOD=3.6866;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.17:0,63,1272	0/0:8,0:8:21.05:0,21,376	0/0:18,0:18:47.07:0,47,951	0/0:25,0:25:72.14:0,72,1459	0/0:25,0:25:75.23:0,75,1638	0/0:17,0:17:51.16:0,51,1126	0/0:29,0:29:84.27:0,84,1849	0/0:36,0:36:99:0,108,2204	0/0:26,0:26:78.25:0,78,1753	0/0:21,0:21:57.08:0,57,1034	0/0:17,0:17:51.12:0,51,1001	0/0:21,0:21:63.19:0,63,1365	0/0:17,0:17:48.15:0,48,1030	0/0:15,0:15:45.13:0,45,936	0/0:23,0:23:63.22:0,63,1450	1/1:0,21:21:42.14:713,42,0	0/0:25,0:25:72.19:0,72,1565	0/0:29,0:29:84.25:0,84,1807	0/0:23,0:23:66.07:0,66,1381	0/0:22,0:22:63.14:0,63,1231	0/0:22,0:22:66.14:0,66,1294	0/0:21,0:21:63.19:0,63,1359	0/0:18,0:18:51.14:0,51,1059	0/0:34,0:34:99:0,102,2281	0/0:19,0:19:51.16:0,51,1132	0/0:21,0:21:57.15:0,57,1062	0/0:29,0:29:81.28:0,81,1835	0/0:18,0:18:54.16:0,54,1153
chr10	99443837	.	A	AGAGACGTGT	12174.82	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=1.741;DP=575;FS=2.526;HRun=0;HaplotypeScore=159.3576;InbreedingCoeff=0.9991;MQ=86.07;MQ0=1;MQRankSum=-14.378;QD=106.80;ReadPosRankSum=0.856;VQSLOD=5.6579;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,19:30:62.71:3038,63,0	0/0:12,0:12:36.12:0,36,1086	0/0:16,0:16:42.14:0,42,1225	0/0:26,0:26:72.23:0,72,1969	0/0:15,0:15:39.13:0,39,1163	1/1:9,9:18:45.15:2090,45,0	1/1:5,12:19:45.15:2134,45,0	0/0:29,0:29:72.24:0,72,1971	0/0:16,0:16:45.14:0,45,1304	0/0:18,0:18:48.16:0,48,1445	0/0:24,0:24:72.25:0,72,2170	0/0:17,0:17:45.15:0,45,1378	0/0:26,0:26:72.23:0,72,2076	0/0:25,0:25:69.24:0,69,1994	0/0:17,0:17:51.18:0,51,1538	0/0:20,0:20:57.20:0,57,1669	1/1:7,12:21:45.15:2081,45,0	0/0:20,0:20:57.20:0,57,1746	0/0:18,0:18:51.17:0,51,1449	0/0:24,0:24:70.73:0,71,1884	0/0:14,0:14:39.12:0,39,1108	0/0:23,0:23:66.21:0,66,1897	0/0:28,0:28:81.26:0,81,2349	0/0:14,0:14:42.14:0,42,1261	0/0:23,0:23:63.21:0,63,1737	1/1:6,8:15:45.13:1815,45,0	0/0:36,0:36:99:0,102,3116	1/1:2,7:9:21.07:1017,21,0
chr10	99444094	.	CCA	C	2680.04	PASS	AB=0.972;AC=27;AF=0.482;AN=56;BaseQRankSum=11.986;DP=541;FS=1.859;HRun=0;HaplotypeScore=100.1906;InbreedingCoeff=0.2496;MQ=70.99;MQ0=5;MQRankSum=-3.048;QD=7.51;ReadPosRankSum=7.388;VQSLOD=2.9234;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1472	1/1:6,0:6:15.27:64,15,0	0/0:14,0:12:28.91:0,29,350	0/0:17,0:15:29.45:0,29,381	0/1:23,0:22:43.85:115,0,44	0/0:22,0:22:63.04:0,63,905	0/0:30,0:30:84.16:0,84,1140	0/1:21,0:21:48.59:49,0,168	1/1:26,0:25:23.22:213,23,0	1/1:14,0:14:15.80:122,16,0	0/1:13,0:13:18.11:80,0,18	1/1:14,1:15:38.96:198,39,0	0/1:17,1:18:5.29:153,0,5	0/1:19,1:19:3.08:148,0,3	0/1:31,2:33:15.56:299,0,16	0/1:23,0:22:42.93:149,0,43	0/0:28,0:28:81.24:0,81,1220	0/0:16,0:16:47.97:0,48,679	0/1:16,0:15:67.80:68,0,87	1/1:18,3:21:33.72:266,34,0	0/1:23,0:23:66.33:110,0,66	1/1:17,1:18:13.93:167,14,0	0/1:17,2:19:25.40:164,0,25	0/1:17,1:18:41.84:113,0,42	1/1:12,2:14:37.87:226,38,0	0/0:14,0:14:35.47:0,35,567	1/1:15,1:16:34.66:175,35,0	0/0:8,0:8:24.08:0,24,386
chr10	99444096	.	ACC	A	9325.65	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-13.289;DP=538;FS=5.687;HRun=10;HaplotypeScore=79.3859;InbreedingCoeff=0.9881;MQ=72.90;MQ0=5;MQRankSum=0.328;QD=26.12;ReadPosRankSum=3.227;VQSLOD=4.9030;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.23:0,90,988	1/1:0,7:7:18.05:201,18,0	0/0:14,0:13:28.71:0,29,258	0/0:17,0:15:30.89:0,31,343	1/1:1,21:22:50.78:531,51,0	0/0:21,0:21:51.13:0,51,557	0/0:29,0:29:68.99:0,69,690	1/1:6,14:20:39.06:423,39,0	1/1:1,25:25:66.18:736,66,0	1/1:1,13:14:39.10:435,39,0	1/1:1,12:13:30.08:334,30,0	1/1:1,15:16:45.12:501,45,0	1/1:3,15:18:41.77:467,42,0	1/1:3,17:19:45.12:501,45,0	1/1:6,25:32:80.95:875,81,0	1/1:4,20:23:51.13:568,51,0	0/0:27,0:27:78.10:0,78,799	0/0:16,0:16:47.64:0,48,701	1/1:5,12:16:30.02:315,30,0	1/1:3,17:20:57.15:632,57,0	1/1:5,17:22:48.12:534,48,0	1/1:2,16:18:42.11:466,42,0	1/1:6,13:19:45.10:501,45,0	1/1:4,13:18:38.13:405,38,0	1/1:2,13:15:42.11:466,42,0	0/0:14,1:15:8.62:0,9,391	1/1:1,14:15:39.11:434,39,0	0/0:8,0:8:24.06:0,24,267
chr10	99445874	.	GA	G	2150.38	PASS	AB=0.971;AC=14;AF=0.250;AN=56;BaseQRankSum=9.978;DP=547;FS=9.544;HRun=10;HaplotypeScore=56.7680;InbreedingCoeff=0.8120;MQ=65.97;MQ0=3;MQRankSum=0.458;QD=12.22;ReadPosRankSum=2.377;VQSLOD=2.3659;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:30.96:532,31,0	0/0:9,0:9:24.06:0,24,258	0/1:31,2:15:15.99:16,0,217	0/0:21,0:13:22.53:0,23,191	0/0:18,0:18:45.12:0,45,497	1/1:2,16:19:44.02:371,44,0	1/1:1,8:9:23.99:208,24,0	0/0:30,0:30:69.17:0,69,748	0/0:14,0:14:39.09:0,39,422	0/0:25,0:25:72.19:0,72,796	0/0:17,0:17:48.09:0,48,505	0/0:14,0:13:36.07:0,36,380	0/0:12,0:12:33.08:0,33,358	0/0:15,0:15:17.65:0,18,407	0/0:23,0:23:63.15:0,63,685	0/1:19,0:19:0.99:1,0,429	1/1:2,32:34:74.98:651,75,0	0/0:19,0:19:54.15:0,54,597	0/0:26,0:26:65.98:0,66,694	0/0:12,0:12:33.09:0,33,365	0/0:15,0:15:42.09:0,42,450	0/0:14,0:14:42.10:0,42,456	0/0:26,0:26:69.15:0,69,744	0/0:14,0:14:36.10:0,36,398	0/0:22,0:22:54.14:0,54,590	1/1:1,21:22:62.21:528,62,0	0/0:20,2:24:36.77:0,37,590	1/1:1,11:12:3:26,3,0
chr10	99446415	.	C	CT	761.08	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.134;DP=717;FS=0.855;HRun=3;HaplotypeScore=118.0512;InbreedingCoeff=0.9987;MQ=83.77;MQ0=0;MQRankSum=-2.990;QD=36.24;ReadPosRankSum=2.415;VQSLOD=3.0869;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,162,1891	0/0:11,0:11:33.10:0,33,396	0/0:32,0:32:81.68:0,82,928	0/0:19,0:19:44.33:0,44,451	0/0:15,0:15:45.12:0,45,523	0/0:17,0:17:51.12:0,51,577	0/0:34,0:34:99:0,99,1165	0/0:32,0:32:96.26:0,96,1128	0/0:28,0:28:81.22:0,81,947	0/0:26,0:26:72.21:0,72,855	0/0:10,0:10:30.09:0,30,360	0/0:27,0:27:75.22:0,75,888	0/0:36,0:36:99:0,102,1223	0/0:31,0:31:93.29:0,93,1116	0/0:30,0:30:87.25:0,87,1032	0/0:19,0:19:54.17:0,54,648	0/0:34,0:34:99:0,99,1161	0/0:32,0:32:93.28:0,93,1113	0/0:11,0:11:33.09:0,33,386	0/0:14,0:14:39.12:0,39,468	0/0:57,0:57:99:0,162,1944	0/0:18,0:18:42.13:0,42,504	0/0:14,0:14:36.11:0,36,431	0/0:41,0:41:99:0,117,1389	0/0:18,0:18:45.13:0,45,529	1/1:0,12:12:36.12:504,36,0	0/0:34,0:34:90.26:0,90,1066	1/1:0,9:9:27.09:378,27,0
chr10	99447219	.	ACAT	A	1942.70	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.425;DP=765;FS=0.589;HRun=0;HaplotypeScore=105.9716;InbreedingCoeff=0.9992;MQ=89.13;MQ0=0;MQRankSum=-4.203;QD=43.17;ReadPosRankSum=1.432;VQSLOD=5.3141;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,2328	0/0:11,0:11:33.11:0,33,761	0/0:33,0:33:93.14:0,93,1827	0/0:24,0:24:69.24:0,69,1473	0/0:20,0:20:57.20:0,57,1314	0/0:30,0:30:78.27:0,78,1799	0/0:20,0:20:57.18:0,57,1251	0/0:34,0:34:93.30:0,93,2011	0/0:37,0:37:99:0,111,2509	0/0:31,0:31:90.31:0,90,2076	0/0:30,0:30:90.31:0,90,2011	0/0:24,0:24:72.25:0,72,1658	0/0:29,0:29:87.30:0,87,1961	0/0:19,0:19:57.20:0,57,1309	0/0:26,0:26:78.27:0,78,1754	0/0:35,0:35:99:0,99,2172	0/0:25,0:25:72.23:0,72,1590	0/0:21,0:21:57.20:0,57,1287	0/0:27,0:27:78.26:0,78,1724	0/0:37,0:37:99:0,111,2478	0/0:29,0:29:78.27:0,78,1777	0/0:19,0:19:57.20:0,57,1314	0/0:35,0:35:99:0,102,2329	0/0:28,0:28:81.28:0,81,1864	0/0:28,0:28:84.29:0,84,1890	1/1:1,33:34:33.13:1604,33,0	0/0:33,0:32:99:0,99,2214	1/1:0,11:11:27.09:460,27,0
chr10	99448607	.	C	CTAT	65.41	PASS	AB=0.551;AC=3;AF=0.056;AN=54;BaseQRankSum=-1.365;DP=283;FS=2.690;HRun=0;HaplotypeScore=93.3603;InbreedingCoeff=-0.1023;MQ=81.16;MQ0=3;MQRankSum=2.664;QD=1.33;ReadPosRankSum=2.083;VQSLOD=1.8120;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:18.03:0,18,213	./.	0/0:18,0:12:21.37:0,21,217	0/0:25,0:15:12.21:0,12,169	0/0:17,0:17:29.76:0,30,380	0/0:17,0:17:27.07:0,27,365	0/0:6,0:6:6.02:0,6,87	0/0:35,0:35:88.15:0,88,1178	0/0:4,0:4:12.04:0,12,168	0/0:11,0:11:33.07:0,33,434	0/0:5,0:5:6.02:0,6,84	0/0:3,0:3:9.03:0,9,131	0/0:7,0:7:12.04:0,12,179	0/0:1,0:1:3.01:0,3,43	0/0:4,0:4:8.92:0,9,102	0/0:8,0:8:12.04:0,12,178	0/1:2,3:14:37.81:38,0,51	0/0:7,0:7:21.07:0,21,390	0/0:14,0:13:38.96:0,39,528	0/0:7,0:7:15.05:0,15,223	0/0:3,0:3:5.91:0,6,57	0/0:1,0:1:3.01:0,3,41	0/0:5,0:5:6.02:0,6,86	0/0:2,0:2:6:0,6,65	0/0:12,0:12:30.10:0,30,441	0/1:2,0:9:19.89:20,0,75	0/0:9,0:9:15.04:0,15,195	0/1:5,0:26:19.42:105,0,19
chr10	99448609	.	TATATATATAC	T	2923.24	PASS	AB=0.977;AC=36;AF=0.667;AN=54;BaseQRankSum=0.062;DP=279;FS=0.000;HRun=0;HaplotypeScore=108.0471;InbreedingCoeff=0.3615;MQ=81.37;MQ0=3;MQRankSum=-3.688;QD=17.30;ReadPosRankSum=-1.163;VQSLOD=2.0636;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,8:13:6.02:165,6,0	./.	0/0:18,0:12:5.16:0,5,56	0/0:26,0:16:10.96:0,11,86	0/0:15,0:15:1.82:0,2,6	1/1:2,15:17:24.08:729,24,0	1/1:1,5:6:3.01:95,3,0	1/1:32,1:33:58.02:760,58,0	1/1:4,0:4:3.01:33,3,0	0/1:9,1:10:25.55:173,0,26	0/0:5,0:5:2.37:0,2,8	1/1:3,0:3:6.02:66,6,0	1/1:7,0:7:9.02:99,9,0	1/1:1,0:1:3.01:33,3,0	1/1:4,0:4:6:58,6,0	1/1:9,0:9:9.02:99,9,0	0/0:14,0:14:9.03:0,9,147	0/0:7,0:7:20.99:0,21,817	1/1:13,1:13:26.75:334,27,0	1/1:8,0:8:8.30:118,8,0	1/1:3,0:3:3:25,3,0	1/1:1,0:1:2.99:23,3,0	1/1:4,1:5:5.98:55,6,0	1/1:2,0:2:2.99:24,3,0	0/1:12,0:12:15.32:15,0,26	0/1:8,0:8:49.72:50,0,421	0/1:9,0:9:3.61:134,0,4	0/0:25,0:25:66.23:0,66,2753
chr10	99448611	.	TATATATAC	T	5766.25	PASS	AB=1.000;AC=43;AF=0.796;AN=54;BaseQRankSum=-3.082;DP=276;FS=1.401;HRun=0;HaplotypeScore=90.2725;InbreedingCoeff=0.5242;MQ=82.89;MQ0=3;MQRankSum=-5.435;QD=31.17;ReadPosRankSum=-0.811;VQSLOD=4.2579;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:6.02:94,6,0	./.	0/0:18,0:12:8.02:0,8,72	0/0:27,0:17:16.83:0,17,98	1/1:14,0:14:2.78:21,3,0	1/1:17,0:17:24.08:436,24,0	1/1:6,0:6:3.01:58,3,0	1/1:3,31:34:96.20:2022,96,0	1/1:3,1:4:3.01:82,3,0	1/1:8,1:9:18.02:327,18,0	1/1:4,0:4:2.91:19,3,0	1/1:1,2:3:6.02:163,6,0	1/1:2,5:7:9.03:244,9,0	1/1:1,0:1:3.01:82,3,0	1/1:3,1:4:6.01:107,6,0	1/1:1,8:9:9.03:245,9,0	0/0:13,0:13:8.88:0,9,85	0/0:7,0:7:20.99:0,21,691	1/1:9,5:13:30.07:586,30,0	1/1:2,6:8:15.02:339,15,0	1/1:3,0:3:3:25,3,0	1/1:0,1:1:3.01:72,3,0	1/1:1,4:5:6.02:151,6,0	1/1:2,0:2:2.99:24,3,0	1/1:10,1:11:23.80:222,24,0	0/1:8,0:8:49.72:50,0,334	1/1:2,7:9:17.09:398,17,0	0/0:25,0:25:66.23:0,66,2230
chr10	99448613	.	TATATAC	T	4121.36	PASS	AB=1.000;AC=43;AF=0.796;AN=54;BaseQRankSum=1.363;DP=267;FS=2.295;HRun=0;HaplotypeScore=86.1942;InbreedingCoeff=0.3981;MQ=82.18;MQ0=3;MQRankSum=-5.421;QD=21.24;ReadPosRankSum=-1.335;VQSLOD=2.9691;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:5.99:65,6,0	./.	0/1:16,0:10:2.27:2,0,44	0/0:29,0:18:16.15:0,16,125	1/1:4,8:12:2.81:69,3,0	0/1:17,0:17:9.78:297,0,10	1/1:6,0:6:3.01:44,3,0	1/1:33,0:33:92.91:1139,93,0	1/1:3,0:3:3.01:46,3,0	1/1:8,1:9:21.01:280,21,0	1/1:0,4:4:3.01:67,3,0	1/1:2,0:2:6.02:91,6,0	1/1:7,0:7:9.03:146,9,0	1/1:1,0:1:3.01:46,3,0	1/1:4,0:4:6.01:70,6,0	1/1:8,0:8:9.03:137,9,0	0/0:12,0:12:7.25:0,7,61	0/0:7,0:7:20.99:0,21,567	1/1:15,0:14:30.53:365,31,0	1/1:6,1:7:15.05:244,15,0	1/1:3,0:3:3:25,3,0	1/1:1,0:1:3.01:38,3,0	1/1:5,0:5:6.02:82,6,0	1/1:2,0:2:2.99:24,3,0	1/1:3,8:11:24.08:523,24,0	0/1:7,0:7:49.71:50,0,258	1/1:7,2:9:18.06:273,18,0	0/0:25,0:25:66.23:0,66,1754
chr10	99449177	.	C	CAGACACAG	1538.67	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=3.019;DP=722;FS=2.534;HRun=0;HaplotypeScore=252.6210;InbreedingCoeff=0.5181;MQ=47.86;MQ0=21;MQRankSum=-1.200;QD=10.54;ReadPosRankSum=2.181;VQSLOD=2.2452;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:39,2:41:5.26:423,5,0	0/0:10,0:10:23.93:0,24,214	0/0:26,0:7:11.17:0,11,205	0/0:41,0:11:16.45:0,16,239	0/0:19,0:18:27.02:0,27,301	1/1:21,6:26:4.31:761,4,0	1/1:33,0:31:5.60:394,6,0	0/0:46,0:45:99:0,126,1431	0/0:30,0:30:53.25:0,53,556	0/0:35,0:33:7.98:0,8,982	0/0:25,0:23:51.03:0,51,570	0/0:22,0:22:8.86:0,9,223	0/0:23,0:23:49.45:0,49,487	0/0:20,0:20:29.93:0,30,380	0/1:28,0:28:30.35:30,0,327	0/0:25,0:25:27.57:0,28,440	0/0:19,0:18:26.12:0,26,362	0/0:27,0:27:50.14:0,50,1532	0/0:23,0:21:56.14:0,56,617	0/0:22,0:22:35.46:0,35,259	0/0:44,0:39:61.93:0,62,700	0/0:20,0:20:28.01:0,28,312	0/0:16,0:16:26.87:0,27,231	0/0:28,0:27:38.16:0,38,288	0/1:17,0:17:17.94:60,0,18	0/0:17,0:17:48.07:0,48,520	0/0:29,0:28:22.26:0,22,489	0/0:9,0:9:6.36:0,6,33
chr10	99449185	.	C	CACACACACACAG	9477.09	PASS	AB=0.954;AC=43;AF=0.768;AN=56;BaseQRankSum=-4.593;DP=738;FS=4.747;HRun=0;HaplotypeScore=270.4510;InbreedingCoeff=0.2648;MQ=46.28;MQ0=23;MQRankSum=1.925;QD=14.08;ReadPosRankSum=-0.461;VQSLOD=2.6916;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:41:99:204,0,173	1/1:8,0:8:14.04:146,14,0	0/0:29,0:8:8.93:0,9,96	0/1:40,0:9:2.97:3,0,93	1/1:18,0:17:23.29:342,23,0	0/1:21,0:27:99:562,0,120	0/1:34,0:32:99:332,0,283	1/1:51,0:50:80.85:572,81,0	1/1:27,0:27:20.06:249,20,0	1/1:31,0:29:62.02:911,62,0	1/1:28,0:26:48.05:688,48,0	1/1:24,0:24:38.79:442,39,0	1/1:24,0:24:47.68:491,48,0	0/1:22,0:22:1.44:298,0,1	1/1:12,9:28:3.32:228,3,0	0/1:22,0:24:5.08:319,0,5	1/1:21,0:20:33.70:570,34,0	0/0:27,0:27:21.88:0,22,1031	1/1:23,0:21:30.71:285,31,0	1/1:23,0:23:23.74:262,24,0	1/1:44,0:40:50.47:518,50,0	1/1:19,0:19:23.42:227,23,0	1/1:16,0:17:20.95:245,21,0	1/1:30,0:29:47.75:649,48,0	1/1:0,17:22:3.01:180,3,0	0/1:17,0:17:85.69:86,0,94	1/1:28,0:27:51.92:669,52,0	0/0:9,0:9:1.23:0,1,27
chr10	99449512	.	AG	A	13859.53	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=1.497;DP=563;FS=5.456;HRun=2;HaplotypeScore=63.4397;InbreedingCoeff=0.9993;MQ=94.07;MQ0=0;MQRankSum=-3.016;QD=38.82;ReadPosRankSum=4.458;VQSLOD=5.3863;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.26:0,75,1196	1/1:0,9:9:27.09:377,27,0	0/0:29,0:29:87.15:0,87,1293	0/0:26,0:26:77.04:0,77,1158	1/1:0,20:20:57.19:794,57,0	0/0:29,0:29:87.28:0,87,1341	0/0:20,0:20:60.19:0,60,934	1/1:0,24:24:72.22:988,72,0	1/1:0,18:18:45.15:629,45,0	1/1:0,29:29:87.29:1216,87,0	1/1:0,23:23:60.20:839,60,0	1/1:0,22:22:66.22:923,66,0	1/1:0,19:19:45.15:629,45,0	1/1:0,19:19:57.19:797,57,0	1/1:0,18:18:44.98:629,45,0	1/1:0,19:19:54.18:755,54,0	0/0:24,0:24:72.25:0,72,1149	0/0:8,0:8:24.08:0,24,384	1/1:0,18:18:54.18:753,54,0	1/1:0,27:27:75.25:1048,75,0	1/1:0,15:15:42.14:587,42,0	1/1:0,15:15:42.14:587,42,0	1/1:0,12:12:27.09:378,27,0	1/1:0,14:14:39.13:545,39,0	1/1:0,11:11:30.10:420,30,0	0/0:29,0:29:87.29:0,87,1365	1/1:0,25:25:69.05:965,69,0	0/0:15,0:15:45.15:0,45,719
chr10	99450730	.	GTA	G	2083.20	PASS	AC=28;AF=0.609;AN=46;BaseQRankSum=-3.210;DP=221;FS=3.255;HRun=0;HaplotypeScore=51.6660;InbreedingCoeff=0.6522;MQ=90.71;MQ0=8;MQRankSum=1.432;QD=28.15;ReadPosRankSum=0.573;VQSLOD=4.4339;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:1:3.01:0,3,52	1/1:1,0:1:3.01:38,3,0	0/0:29,0:14:11.35:0,11,119	0/0:66,0:31:36.67:0,37,421	1/1:2,5:7:9.03:120,9,0	0/0:3,0:3:6.02:0,6,104	0/0:1,0:1:3.01:0,3,52	1/1:2,32:34:96.25:1212,96,0	1/1:1,2:3:6.02:80,6,0	1/1:0,3:3:9.03:120,9,0	1/1:0,2:2:6.02:80,6,0	./.	1/1:0,1:1:3.01:40,3,0	1/1:1,1:2:3.01:40,3,0	1/1:0,1:1:3.01:40,3,0	1/1:0,2:2:6.02:80,6,0	0/0:16,0:16:45.13:0,45,740	0/0:13,0:13:30.10:0,30,496	1/1:0,3:3:9.03:120,9,0	1/1:0,2:2:6.02:80,6,0	./.	./.	./.	./.	1/1:0,3:3:6.02:80,6,0	0/0:3,0:3:6.02:0,6,104	1/1:3,7:10:9.03:120,9,0	0/0:14,0:14:36.08:0,36,565
chr10	99451611	.	G	GA	1569.20	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=-8.221;DP=697;FS=4.574;HRun=10;HaplotypeScore=68.7531;InbreedingCoeff=0.7452;MQ=73.51;MQ0=0;MQRankSum=-1.691;QD=15.09;ReadPosRankSum=-1.120;VQSLOD=3.7471;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:9,35:44:87.22:928,87,0	0/0:8,0:8:20.97:0,21,172	0/1:14,0:14:12.03:12,0,104	0/0:17,0:17:25.77:0,26,202	0/0:35,1:37:62.92:0,63,712	1/1:4,18:22:26.49:487,26,0	1/1:3,10:13:27.07:288,27,0	0/0:34,1:35:42.83:0,43,550	0/0:21,0:21:56.92:0,57,465	0/0:34,0:34:83.88:0,84,690	0/0:24,1:25:30.89:0,31,457	0/0:21,0:22:49.95:0,50,400	0/0:20,0:20:47.90:0,48,389	0/0:22,0:22:56.90:0,57,468	0/0:30,3:34:24.95:0,25,607	0/0:17,0:17:50.94:0,51,418	0/0:31,0:31:80.88:0,81,665	0/0:22,0:22:53.92:0,54,443	0/0:31,0:31:65.83:0,66,536	0/0:38,0:38:77.32:0,77,636	0/0:26,0:26:53.89:0,54,443	0/0:25,0:26:67.96:0,68,548	0/0:22,2:24:30.92:0,31,458	0/0:16,0:16:41.94:0,42,345	0/0:30,1:32:49.52:0,50,612	0/0:28,0:28:56.89:0,57,466	0/0:27,0:27:62.86:0,63,514	0/1:11,0:11:4.27:4,0,170
chr10	99452093	.	A	AT	632.16	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.198;DP=572;FS=0.000;HRun=9;HaplotypeScore=52.5866;InbreedingCoeff=0.9521;MQ=73.58;MQ0=0;MQRankSum=-0.184;QD=21.80;ReadPosRankSum=0.905;VQSLOD=4.1185;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:39:97.03:0,97,819	0/0:10,0:10:23.99:0,24,208	0/0:7,0:7:15:0,15,130	0/0:14,0:14:23.74:0,24,222	0/0:42,1:43:80.73:0,81,923	0/0:20,1:23:22.83:0,23,413	0/0:10,0:10:29.99:0,30,260	0/0:24,0:24:62.97:0,63,541	0/0:14,0:14:38.97:0,39,334	0/0:30,0:30:76.81:0,77,675	0/0:30,0:30:74.92:0,75,640	0/0:24,0:24:56.97:0,57,495	0/0:21,0:21:29.61:0,30,415	0/0:16,0:16:44.97:0,45,386	0/0:20,0:20:56.97:0,57,491	0/0:24,0:24:65.96:0,66,573	0/0:23,0:23:59.94:0,60,514	0/0:22,0:22:59.99:0,60,521	0/0:21,0:21:50.96:0,51,435	0/0:27,0:27:71.97:0,72,625	0/0:5,0:5:8.97:0,9,74	0/0:12,0:12:32.99:0,33,286	0/0:10,0:10:20.97:0,21,178	0/0:18,0:18:44.94:0,45,384	0/0:19,0:19:50.98:0,51,441	1/1:2,19:21:31.12:571,31,0	0/0:37,0:37:98.96:0,99,859	1/1:2,5:8:17.88:180,18,0
chr10	99453809	.	CTATT	C	1129.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.587;DP=696;FS=2.725;HRun=0;HaplotypeScore=114.6437;InbreedingCoeff=0.9629;MQ=70.27;MQ0=0;MQRankSum=-0.733;QD=38.96;ReadPosRankSum=1.803;VQSLOD=3.6209;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.21:0,60,1515	0/0:16,0:16:39.06:0,39,887	0/0:17,0:18:35.54:0,36,662	0/0:8,0:8:11.53:0,12,206	0/0:32,0:32:84.65:0,85,1908	0/0:26,0:26:66.23:0,66,1669	0/0:20,0:20:54.19:0,54,1348	0/0:37,0:37:96.32:0,96,2372	0/0:24,0:24:66.21:0,66,1579	0/0:34,0:34:79.51:0,80,1861	0/0:24,0:24:60.16:0,60,1436	0/0:25,0:25:72.25:0,72,1847	0/0:28,0:28:75.26:0,75,1908	0/0:19,0:19:57.20:0,57,1428	0/0:29,0:29:81.28:0,81,2018	0/0:30,0:30:81.75:0,82,1991	1/1:2,27:29:72.24:1225,72,0	0/0:28,0:28:72.25:0,72,1813	0/0:23,0:23:66.22:0,66,1639	0/0:36,0:36:87.25:0,87,2102	0/0:16,0:16:39.13:0,39,941	0/0:18,0:18:51.18:0,51,1306	0/0:22,0:22:63.22:0,63,1606	0/0:15,0:15:39.13:0,39,1001	0/0:43,0:42:99:0,120,2857	0/0:29,0:29:81.28:0,81,2037	0/0:40,0:40:99:0,117,2907	0/0:7,0:7:21.07:0,21,516
chr10	99454494	.	GATAAA	G	4017.58	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=-0.504;DP=340;FS=4.779;HRun=0;HaplotypeScore=68.1381;InbreedingCoeff=0.3910;MQ=78.40;MQ0=8;MQRankSum=-0.224;QD=16.67;ReadPosRankSum=1.083;VQSLOD=2.5475;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,7:17:15.05:276,15,0	1/1:4,2:6:6.02:110,6,0	0/0:31,0:15:0.89:0,1,2	0/0:51,0:32:6.13:0,6,87	1/1:8,8:16:21.07:350,21,0	1/1:2,11:13:21.07:386,21,0	1/1:4,3:7:3.01:55,3,0	1/1:13,11:24:33.09:479,33,0	1/1:8,2:10:3.01:55,3,0	1/1:10,6:16:18.05:276,18,0	1/1:6,7:13:18.06:256,18,0	1/1:3,5:8:6.02:110,6,0	1/1:3,9:12:11.94:221,12,0	1/1:6,0:6:3.01:55,3,0	1/1:3,4:7:6.02:110,6,0	1/1:3,4:7:9.03:165,9,0	1/1:8,0:13:9.03:105,9,0	0/0:13,0:12:21.07:0,21,596	1/1:8,0:8:3.01:53,3,0	1/1:9,2:11:3.01:55,3,0	1/1:2,2:4:3.01:55,3,0	./.	1/1:3,2:5:6.02:91,6,0	1/1:3,2:5:3.01:55,3,0	1/1:6,1:7:6.02:106,6,0	1/1:4,7:11:21.04:315,21,0	1/1:6,6:12:9.03:165,9,0	1/1:1,2:3:6.02:110,6,0
chr10	99454633	.	G	GA	7220.10	PASS	AB=0.575;AC=42;AF=0.750;AN=56;BaseQRankSum=-6.335;DP=410;FS=23.358;HRun=9;HaplotypeScore=42.4088;InbreedingCoeff=0.7766;MQ=76.94;MQ0=0;MQRankSum=-0.858;QD=22.08;ReadPosRankSum=0.030;VQSLOD=3.2270;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:48.13:531,48,0	1/1:3,3:6:12.03:133,12,0	0/0:13,0:13:12.72:0,13,134	0/0:11,0:11:12.08:0,12,105	1/1:6,2:22:40.12:214,40,0	1/1:4,24:30:68.79:710,69,0	1/1:1,9:10:21.06:232,21,0	1/1:4,23:27:63.16:689,63,0	1/1:0,7:7:15.04:166,15,0	1/1:6,0:11:11.49:63,11,0	1/1:5,0:10:17.29:96,17,0	1/1:3,12:15:30.08:332,30,0	1/1:2,15:17:16.08:405,16,0	1/1:1,5:7:17.88:180,18,0	1/1:1,20:21:54.15:597,54,0	1/1:2,11:13:4.05:273,4,0	0/0:12,0:12:32.97:0,33,281	0/0:22,0:22:39.53:0,40,428	1/1:3,13:16:30.08:332,30,0	1/1:1,16:17:43.36:468,43,0	1/1:2,14:16:39.11:431,39,0	1/1:0,4:5:14.87:147,15,0	0/1:4,14:18:13:326,0,13	0/1:3,7:10:1.99:208,0,2	1/1:1,0:6:11.36:57,11,0	0/0:19,0:19:22.83:0,23,319	1/1:5,20:24:57.15:631,57,0	0/0:6,0:6:11.99:0,12,104
chr10	99456051	.	TACACACAC	T	2001.92	PASS	AB=0.807;AC=28;AF=0.560;AN=50;BaseQRankSum=2.728;DP=504;FS=1.766;HRun=0;HaplotypeScore=143.0850;InbreedingCoeff=0.1999;MQ=62.51;MQ0=17;MQRankSum=-3.829;QD=6.81;ReadPosRankSum=-1.050;VQSLOD=2.3138;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:25:12.98:0,13,182	1/1:4,9:13:5.93:40,6,0	./.	./.	1/1:7,0:12:5.02:27,5,0	0/0:14,0:16:5.99:0,6,48	0/0:19,0:20:14.73:0,15,171	1/1:27,0:27:1.94:19,2,0	1/1:6,11:18:12:241,12,0	0/0:12,0:15:6.14:0,6,98	0/0:9,0:15:5.77:0,6,76	1/1:9,3:12:0.05:195,0,0	1/1:8,7:16:2.47:268,2,0	1/1:3,7:10:7.41:292,7,0	0/1:14,13:28:8.92:191,0,9	1/1:10,12:22:15.52:375,16,0	0/0:16,0:27:21.01:0,21,449	0/0:18,0:17:27.02:0,27,646	0/1:7,4:11:12.14:79,0,12	0/1:17,0:17:10.17:51,0,10	0/1:16,0:16:18.01:18,0,36	1/1:7,5:13:1.73:5,2,0	0/1:5,5:11:0.03:0,0,0	1/1:14,0:14:3.01:74,3,0	0/1:11,0:19:34.20:34,0,68	0/1:11,7:18:3.03:171,0,3	0/1:16,0:16:12.04:76,0,12	./.
chr10	99459293	.	A	AGTGTGT	3633.50	PASS	AB=0.876;AC=34;AF=0.680;AN=50;BaseQRankSum=1.065;DP=615;FS=20.173;HRun=0;HaplotypeScore=166.6217;InbreedingCoeff=0.4541;MQ=67.60;MQ0=9;MQRankSum=-6.170;QD=9.36;ReadPosRankSum=0.350;VQSLOD=1.3884;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:42:54.08:0,54,948	1/1:5,1:13:24.08:593,24,0	./.	./.	./.	0/0:7,0:12:12.04:0,12,167	0/1:15,0:28:2.33:2,0,326	0/0:26,0:23:6:0,6,85	1/1:13,1:23:13.62:189,14,0	1/1:20,0:19:15.05:344,15,0	1/1:9,1:13:1.75:36,2,0	1/1:17,8:26:9.50:282,10,0	1/1:10,2:13:12.04:262,12,0	1/1:22,0:25:9.03:221,9,0	1/1:21,0:28:3.80:74,4,0	1/1:17,5:28:21.07:504,21,0	0/0:28,0:34:45.15:0,45,852	0/0:17,0:17:15.05:0,15,281	1/1:16,1:17:2.14:95,2,0	1/1:9,4:16:2.15:37,2,0	0/0:17,5:24:0.88:0,1,2	1/1:17,5:24:3.01:61,3,0	1/1:9,0:15:4.50:71,4,0	0/1:15,7:24:0:0,0,0	1/1:17,3:24:7.39:283,7,0	0/1:11,0:18:7.67:8,0,162	0/1:19,3:26:92.81:530,0,93	1/1:3,0:3:3.01:43,3,0
chr10	99459618	.	G	GA	4060.51	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-3.981;DP=681;FS=4.938;HRun=5;HaplotypeScore=118.8930;InbreedingCoeff=0.8080;MQ=75.96;MQ0=0;MQRankSum=0.735;QD=27.62;ReadPosRankSum=-2.364;VQSLOD=1.6992;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:34:78.25:1016,78,0	0/0:11,0:11:24.98:0,25,129	0/0:15,0:14:2.97:0,3,90	0/0:11,0:12:15.84:0,16,196	0/0:26,0:26:30.77:0,31,223	1/1:2,18:20:48.16:623,48,0	1/1:1,29:31:87.27:1118,87,0	0/0:25,0:25:20.61:0,21,140	0/0:24,0:24:29.73:0,30,209	0/0:18,0:18:14.73:0,15,159	0/0:18,0:18:15.03:0,15,169	0/0:33,0:33:28.70:0,29,277	0/0:28,0:28:44.68:0,45,270	0/0:29,0:29:52.61:0,53,284	0/0:40,0:40:24.15:0,24,303	0/0:41,0:41:99:0,104,432	1/1:3,33:37:99:1279,99,0	0/0:16,0:16:48.12:0,48,516	0/1:25,0:25:23.46:23,0,147	0/0:25,0:25:17.21:0,17,150	0/0:23,0:23:45.51:0,46,201	0/0:17,0:17:39.88:0,40,203	0/0:18,0:18:38.17:0,38,182	0/0:28,0:28:63.84:0,64,282	0/0:17,0:17:36.98:0,37,154	0/0:29,0:29:66.59:0,67,679	0/0:37,0:37:68.79:0,69,370	0/0:4,0:4:12.03:0,12,129
chr10	99460357	.	TTCC	T	2732.40	PASS	AB=0.952;AC=29;AF=0.518;AN=56;BaseQRankSum=7.404;DP=429;FS=18.593;HRun=0;HaplotypeScore=157.3763;InbreedingCoeff=0.1584;MQ=67.44;MQ0=4;MQRankSum=-6.549;QD=9.36;ReadPosRankSum=8.508;VQSLOD=1.4173;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:6.30:0,6,170	0/1:8,1:9:0.40:126,0,0	0/0:36,0:19:32.11:0,32,407	0/0:47,0:24:37.72:0,38,544	0/1:21,1:22:47.22:58,0,47	0/0:5,0:5:10.76:0,11,49	0/0:18,0:18:36.99:0,37,229	0/1:20,0:20:99:181,0,127	1/1:14,1:15:40.02:265,40,0	1/1:14,0:14:18.75:233,19,0	0/1:8,2:10:24.30:71,0,24	1/1:18,0:18:7.29:262,7,0	0/1:17,2:19:11.89:197,0,12	1/1:12,1:13:33.84:207,34,0	1/1:14,1:14:28.19:167,28,0	0/1:13,0:13:63.20:108,0,63	1/1:12,0:13:15.95:172,16,0	0/0:2,0:2:6.02:0,6,119	0/1:14,1:14:40.21:124,0,40	0/1:14,0:14:44.57:93,0,45	0/1:17,0:14:23.01:23,0,42	1/1:7,0:7:18.08:100,18,0	1/1:10,0:10:23.30:125,23,0	0/1:17,0:16:19.95:20,0,73	1/1:14,0:14:6.58:191,7,0	0/0:10,0:11:2.98:0,3,87	0/1:15,1:17:3.65:192,0,4	0/0:1,0:1:2.68:0,3,11
chr10	99460358	.	TCCC	T	7281.03	PASS	AB=0.556;AC=41;AF=0.732;AN=56;BaseQRankSum=-0.196;DP=421;FS=3.656;HRun=10;HaplotypeScore=143.0035;InbreedingCoeff=0.7968;MQ=67.64;MQ0=4;MQRankSum=-4.820;QD=24.27;ReadPosRankSum=3.382;VQSLOD=2.6687;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:15:11.22:0,11,40	1/1:1,7:8:21.03:250,21,0	0/0:30,0:19:18.03:0,18,277	0/0:45,0:23:24.59:0,25,378	1/1:3,18:21:35.28:299,35,0	0/0:1,0:5:4.24:0,4,13	0/0:10,0:17:14.64:0,15,50	1/1:9,11:20:36.08:485,36,0	1/1:3,12:15:41.89:507,42,0	1/1:1,12:14:39.12:529,39,0	1/1:4,6:10:20.63:215,21,0	1/1:2,16:18:33.42:555,33,0	1/1:4,15:19:33.37:483,33,0	1/1:2,11:13:37.89:449,38,0	1/1:1,14:14:35.96:378,36,0	1/1:5,9:14:10.13:305,10,0	1/1:1,12:13:33.03:400,33,0	0/0:2,0:2:6.02:0,6,91	1/1:6,9:14:27.08:347,27,0	1/1:2,11:13:29.92:322,30,0	1/1:2,15:14:20.85:174,21,0	1/1:0,7:7:20.91:213,21,0	1/1:1,9:10:27.04:331,27,0	1/1:5,12:16:7.08:84,7,0	1/1:2,12:14:33.06:418,33,0	0/1:2,1:10:9.56:28,0,10	1/1:5,12:17:42.06:508,42,0	0/0:0,0:1:1.25:0,1,3
chr10	99460368	.	CA	C	3122.87	PASS	AB=0.976;AC=33;AF=0.611;AN=54;BaseQRankSum=3.782;DP=402;FS=12.208;HRun=2;HaplotypeScore=162.8146;InbreedingCoeff=0.3794;MQ=64.29;MQ0=4;MQRankSum=-1.334;QD=11.03;ReadPosRankSum=9.199;VQSLOD=0.0332;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:11:6.52:0,7,44	1/1:8,0:8:17.82:169,18,0	0/0:32,0:17:25.89:0,26,213	0/0:43,0:22:20.44:0,20,269	0/1:19,0:19:15.33:15,0,27	0/0:6,0:6:5.57:0,6,27	0/0:15,0:15:8.91:0,9,76	0/1:16,0:16:71.94:72,0,79	1/1:15,1:16:23.67:335,24,0	0/1:18,0:18:4.28:4,0,94	1/1:8,0:8:9.81:93,10,0	1/1:18,1:19:39.52:365,40,0	1/1:17,0:17:16.53:343,17,0	1/1:13,0:13:14.87:271,15,0	1/1:17,0:16:13.54:268,14,0	0/1:11,0:12:15.36:73,0,15	0/1:14,0:14:11.65:128,0,12	./.	1/1:17,0:16:15.22:188,15,0	1/1:12,0:12:22.30:159,22,0	0/1:16,0:13:17.97:21,0,18	1/1:8,0:8:6.62:54,7,0	0/1:9,1:10:4.35:103,0,4	1/1:14,0:13:5.54:44,6,0	1/1:12,0:12:29.96:288,30,0	0/0:10,0:10:9.98:0,10,156	1/1:16,1:17:35.14:314,35,0	0/0:1,0:1:2.96:0,3,19
chr10	99460370	.	A	ACT	8003.11	PASS	AB=0.858;AC=45;AF=0.865;AN=52;BaseQRankSum=-1.553;DP=437;FS=3.761;HRun=0;HaplotypeScore=172.8023;InbreedingCoeff=0.1918;MQ=61.52;MQ0=7;MQRankSum=-2.224;QD=19.96;ReadPosRankSum=2.705;VQSLOD=5.0173;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,4:13:18.53:250,19,0	1/1:4,4:9:18.06:273,18,0	0/0:33,0:17:4.69:0,5,46	0/1:41,0:22:0.04:0,0,147	1/1:9,13:22:3.01:43,3,0	1/1:5,2:6:9.03:131,9,0	1/1:12,3:15:18.04:228,18,0	1/1:12,2:14:21.07:315,21,0	1/1:10,11:21:50.91:715,51,0	0/1:13,6:19:6.25:396,0,6	1/1:2,8:10:12.03:170,12,0	1/1:7,12:19:48.12:693,48,0	1/1:4,12:16:39.13:582,39,0	1/1:6,10:16:33.41:474,33,0	1/1:4,12:15:36.12:529,36,0	0/1:8,5:14:9.77:251,0,10	1/1:9,7:16:27.08:408,27,0	./.	1/1:13,4:16:36.12:535,36,0	1/1:6,9:15:23.79:354,24,0	0/1:19,4:20:29.06:89,0,29	1/1:1,7:8:11.97:156,12,0	1/1:4,7:12:17.90:281,18,0	1/1:8,6:13:3.27:83,3,0	1/1:7,6:13:33.11:498,33,0	0/1:11,0:11:26.54:27,0,102	1/1:6,12:18:38.31:523,38,0	./.
chr10	99460397	.	C	CCT	4490.28	PASS	AB=0.834;AC=37;AF=0.685;AN=54;BaseQRankSum=1.467;DP=440;FS=2.000;HRun=0;HaplotypeScore=165.2491;InbreedingCoeff=0.4435;MQ=48.07;MQ0=21;MQRankSum=-3.766;QD=15.17;ReadPosRankSum=1.985;VQSLOD=4.7389;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:17:4.56:0,5,23	1/1:4,5:9:10.38:176,10,0	0/0:38,0:16:18.40:0,18,306	0/0:49,0:20:6.87:0,7,334	0/0:7,14:21:4.65:0,5,12	0/1:7,0:4:10.79:11,0,18	1/1:21,0:20:0.93:2,1,0	1/1:15,0:12:13.57:187,14,0	1/1:7,11:18:33.26:382,33,0	1/1:4,10:14:16.11:468,16,0	0/1:10,4:13:13.08:13,0,22	1/1:4,8:12:17.66:365,18,0	1/1:8,8:16:18.04:511,18,0	0/1:12,8:21:23.38:291,0,23	1/1:11,11:21:10.20:298,10,0	1/1:9,9:18:21.56:456,22,0	0/0:11,0:10:26.95:0,27,253	0/0:3,0:2:6.02:0,6,92	1/1:8,3:10:17.06:197,17,0	1/1:4,8:13:5.60:71,6,0	1/1:15,5:17:11.07:101,11,0	1/1:1,7:7:0.94:48,1,0	1/1:8,7:15:14.06:157,14,0	0/1:5,4:8:4.56:58,0,5	1/1:5,5:10:19.07:179,19,0	0/1:5,0:4:4.51:11,0,5	1/1:11,7:17:38.89:509,39,0	./.
chr10	99460398	.	C	CA	637.36	PASS	AB=0.938;AC=18;AF=0.333;AN=54;BaseQRankSum=-2.212;DP=431;FS=17.417;HRun=0;HaplotypeScore=169.3889;InbreedingCoeff=0.1588;MQ=46.71;MQ0=22;MQRankSum=-2.188;QD=3.25;ReadPosRankSum=-2.330;VQSLOD=1.7426;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:17:14.95:0,15,95	0/1:9,0:9:5.62:50,0,6	0/0:37,0:15:31.85:0,32,335	0/0:48,0:20:40.14:0,40,433	0/0:22,0:21:4.66:0,5,11	0/0:6,0:3:5.97:0,6,45	0/0:21,0:20:6.18:0,6,33	1/1:11,3:11:26.63:227,27,0	0/1:16,1:18:35.77:36,0,61	0/1:12,1:13:21.40:21,0,45	0/0:11,2:13:2.94:0,3,18	0/1:12,0:12:27.39:69,0,27	0/1:16,0:16:7.37:7,0,106	0/1:19,2:21:6.42:6,0,89	1/1:19,2:20:3.57:91,4,0	0/1:15,3:18:1.80:2,0,84	0/0:11,0:10:27:0,27,330	0/0:3,0:2:6.02:0,6,84	1/1:7,4:10:16.34:186,16,0	0/0:11,1:12:3.02:0,3,8	0/1:17,0:17:6.53:39,0,7	0/0:8,0:7:3.55:0,4,10	1/1:13,1:14:1.06:6,1,0	0/0:8,0:8:4.09:0,4,15	1/1:10,0:10:0.44:49,0,0	0/0:5,0:4:7.67:0,8,55	0/0:14,0:16:8.68:0,9,65	./.
chr10	99460400	.	C	CCCCACACA	7270.91	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-0.136;DP=467;FS=6.077;HRun=0;HaplotypeScore=189.1853;InbreedingCoeff=0.6036;MQ=45.45;MQ0=22;MQRankSum=-4.280;QD=18.50;ReadPosRankSum=-0.671;VQSLOD=3.0386;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:22:23.55:175,24,0	1/1:11,0:11:21.23:229,21,0	0/0:35,0:14:18.68:0,19,368	0/1:47,0:19:2.07:2,0,448	0/0:24,0:23:4.52:0,5,11	1/1:4,0:2:3.01:86,3,0	1/1:6,14:20:9.19:50,9,0	1/1:16,0:13:30:617,30,0	1/1:17,0:18:38.93:519,39,0	1/1:14,0:15:38.86:926,39,0	1/1:15,0:14:2.94:18,3,0	1/1:12,0:12:32.72:400,33,0	1/1:18,0:18:28.54:643,29,0	1/1:20,0:20:6.21:292,6,0	1/1:24,0:23:34.56:304,35,0	1/1:20,0:21:35.43:742,35,0	0/0:12,0:11:20.96:0,21,295	0/0:3,0:2:6.02:0,6,162	1/1:12,0:11:24.08:594,24,0	1/1:14,0:14:3.19:85,3,0	1/1:21,0:18:11.70:105,12,0	1/1:10,0:9:1.41:76,1,0	1/1:15,0:15:5.97:74,6,0	1/1:9,0:9:6.17:30,6,0	1/1:11,0:11:10.91:75,11,0	1/1:8,0:8:15.05:409,15,0	1/1:16,0:17:40.83:703,41,0	1/1:3,0:2:6.02:117,6,0
chr10	99460407	.	CAGAG	C	478.94	PASS	AB=0.985;AC=18;AF=0.346;AN=52;BaseQRankSum=-2.875;DP=454;FS=4.587;HRun=0;HaplotypeScore=159.3066;InbreedingCoeff=0.3200;MQ=43.71;MQ0=20;MQRankSum=3.017;QD=2.56;ReadPosRankSum=-2.549;VQSLOD=1.8099;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:23:3:26,3,0	1/1:10,0:10:5.73:62,6,0	0/0:29,0:11:0:0,0,0	./.	0/0:24,0:23:0.47:0,0,1	0/0:4,0:2:3:0,3,27	0/1:20,0:19:14.48:37,0,14	0/0:19,0:16:1.82:0,2,5	1/1:19,0:19:8.61:79,9,0	0/0:16,0:16:15.12:0,15,96	0/0:12,0:11:2.99:0,3,23	0/0:10,0:10:3.01:0,3,35	0/0:16,0:16:11.94:0,12,119	0/0:20,0:20:11.24:0,11,78	0/0:23,0:22:15.05:0,15,201	0/1:23,1:24:88.67:125,0,89	1/1:7,5:11:6.02:93,6,0	1/1:2,1:2:3.01:46,3,0	1/1:11,0:10:3.01:45,3,0	0/0:13,0:13:0.46:0,0,1	0/1:18,0:16:0:0,0,0	0/1:9,0:8:0:0,0,0	0/1:14,0:14:0:0,0,0	./.	0/0:12,0:12:2.74:0,3,12	0/0:13,0:11:23.92:0,24,300	0/1:18,1:17:40.76:101,0,41	0/0:3,0:3:4.83:0,5,59
chr10	99460539	.	GA	G	12068.70	PASS	AB=0.920;AC=39;AF=0.696;AN=56;BaseQRankSum=6.878;DP=636;FS=5.678;HRun=5;HaplotypeScore=67.8552;InbreedingCoeff=0.9492;MQ=84.76;MQ0=0;MQRankSum=-0.936;QD=26.82;ReadPosRankSum=4.944;VQSLOD=4.5922;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:38:99:0,108,1434	1/1:0,7:7:21.06:238,21,0	0/0:32,0:32:84:0,84,1065	0/0:21,0:21:51.06:0,51,594	1/1:2,20:22:57.16:642,57,0	0/0:13,0:13:33.10:0,33,430	0/0:24,0:20:60.08:0,60,737	1/1:3,25:27:72.14:775,72,0	1/1:0,28:28:81.16:900,81,0	1/1:2,23:25:68.50:723,69,0	1/1:0,17:17:48.08:528,48,0	1/1:2,18:20:48.14:543,48,0	1/1:2,23:25:63.10:688,63,0	1/1:1,21:22:60.13:664,60,0	1/1:1,27:28:63.18:713,63,0	1/1:0,16:16:42.12:475,42,0	0/0:25,0:25:72.23:0,72,957	0/0:10,0:10:30.10:0,30,405	1/1:0,10:10:30.09:339,30,0	1/1:2,23:25:69.03:735,69,0	1/1:4,48:52:99:1222,108,0	1/1:1,18:19:51.14:576,51,0	1/1:1,17:18:42.12:475,42,0	1/1:0,20:19:45.09:509,45,0	1/1:2,15:17:45.13:509,45,0	0/1:21,2:23:1.75:2,0,730	1/1:1,27:28:71.90:812,72,0	0/0:21,0:21:63.21:0,63,848
chr10	99462591	.	G	GT	28834.40	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.736;DP=731;FS=1.575;HRun=1;HaplotypeScore=127.7357;InbreedingCoeff=0.9789;MQ=78.06;MQ0=0;MQRankSum=-7.892;QD=43.56;ReadPosRankSum=6.690;VQSLOD=3.8089;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,56:57:99:2539,160,0	1/1:0,9:9:23.95:383,24,0	0/0:24,0:24:66.14:0,66,823	0/0:25,0:25:68.51:0,69,847	1/1:1,17:18:48.16:755,48,0	1/1:1,19:20:51.17:815,51,0	1/1:0,29:29:84.29:1339,84,0	1/1:3,29:32:96.29:1467,96,0	1/1:2,25:27:69.24:1099,69,0	1/1:0,24:24:72.23:1120,72,0	1/1:1,18:19:51.17:810,51,0	1/1:0,19:19:48.16:764,48,0	1/1:0,24:24:69.24:1102,69,0	1/1:0,26:26:69.24:1099,69,0	1/1:0,33:33:84.29:1342,84,0	1/1:1,33:34:90.31:1438,90,0	1/1:2,23:25:63.21:1006,63,0	0/0:20,0:20:60.18:0,60,818	1/1:2,22:24:72.24:1111,72,0	1/1:0,30:30:84.22:1301,84,0	1/1:0,52:52:99:2396,151,0	1/1:0,24:24:69.24:1098,69,0	1/1:0,28:27:72.25:1148,72,0	1/1:0,36:36:99:1629,102,0	1/1:1,22:22:60.20:944,60,0	1/1:0,24:24:72.23:1124,72,0	1/1:1,21:22:54.18:862,54,0	1/1:0,3:3:9.03:144,9,0
chr10	99463171	.	TCC	T	10796.15	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=9.966;DP=483;FS=0.469;HRun=8;HaplotypeScore=123.5608;InbreedingCoeff=0.9207;MQ=67.37;MQ0=0;MQRankSum=-5.448;QD=28.56;ReadPosRankSum=4.656;VQSLOD=4.0277;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,38:44:96.29:1170,96,0	1/1:0,3:3:6.02:73,6,0	0/0:19,0:17:39.13:0,39,643	0/0:30,0:30:72.25:0,72,1191	1/1:0,10:10:24.08:293,24,0	1/1:0,14:14:36.11:439,36,0	1/1:2,27:29:69.21:838,69,0	1/1:6,21:25:57.13:671,57,0	1/1:1,14:15:42.13:511,42,0	1/1:1,17:18:47.91:584,48,0	1/1:1,7:8:21.07:256,21,0	1/1:4,13:17:39.11:476,39,0	1/1:2,17:19:48.14:585,48,0	1/1:2,14:16:39.12:475,39,0	1/1:1,13:14:36.11:439,36,0	1/1:1,8:9:21.06:256,21,0	1/1:3,21:24:60.18:732,60,0	0/0:28,0:28:78.27:0,78,1302	1/1:2,9:10:24.07:291,24,0	1/1:0,5:5:12.04:146,12,0	1/1:4,22:26:63.19:768,63,0	1/1:2,10:12:24.07:292,24,0	1/1:2,5:7:18.06:219,18,0	1/1:3,17:20:48.14:586,48,0	1/1:0,13:13:21.06:256,21,0	0/0:3,0:27:60.11:0,60,216	1/1:1,16:17:36.11:439,36,0	0/0:0,0:1:2.50:0,2,9
chr10	99463439	.	AG	A	5917.90	PASS	AC=46;AF=0.852;AN=54;BaseQRankSum=7.783;DP=251;FS=13.839;HRun=6;HaplotypeScore=75.9453;InbreedingCoeff=0.9497;MQ=86.93;MQ0=0;MQRankSum=-6.370;QD=29.44;ReadPosRankSum=4.197;VQSLOD=4.3071;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:45.11:483,45,0	1/1:0,5:5:9.02:97,9,0	0/0:19,0:18:33.95:0,34,482	0/0:18,0:18:42.02:0,42,492	1/1:0,9:9:27.02:271,27,0	1/1:0,7:7:21.05:226,21,0	1/1:3,16:19:48.09:507,48,0	1/1:0,8:8:24.06:258,24,0	1/1:0,9:9:24.06:258,24,0	1/1:1,12:13:36.09:386,36,0	1/1:0,6:6:18.05:193,18,0	1/1:1,9:10:27.07:290,27,0	1/1:0,8:8:24.06:258,24,0	1/1:0,11:11:33.08:354,33,0	1/1:0,5:5:15.04:161,15,0	1/1:0,7:7:21.05:226,21,0	1/1:0,10:10:30.08:322,30,0	0/0:7,0:7:18.06:0,18,237	1/1:2,6:8:20.70:194,21,0	1/1:0,8:8:21.05:226,21,0	1/1:1,6:7:17.96:178,18,0	1/1:0,7:7:21.05:226,21,0	1/1:0,4:4:12.03:129,12,0	1/1:0,9:9:27.07:290,27,0	1/1:0,6:6:18.05:193,18,0	0/0:6,0:6:18.05:0,18,224	1/1:0,7:7:18.05:193,18,0	./.
chr10	99464480	.	GA	G	10431.95	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=14.584;DP=472;FS=113.366;HRun=5;HaplotypeScore=141.7000;InbreedingCoeff=0.9719;MQ=104.83;MQ0=0;MQRankSum=-7.452;QD=29.47;ReadPosRankSum=3.699;VQSLOD=-0.3261;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,53:59:99:1667,147,0	1/1:1,3:4:9.02:102,9,0	0/0:36,0:36:99:0,99,1287	0/0:24,0:24:65.43:0,65,857	1/1:1,16:17:39.11:442,39,0	1/1:0,16:16:45.13:510,45,0	1/1:2,20:22:60.17:681,60,0	1/1:5,17:22:51.13:569,51,0	1/1:1,10:11:24.07:272,24,0	1/1:0,13:13:39.11:438,39,0	1/1:3,12:15:36.10:408,36,0	1/1:0,8:8:24.07:272,24,0	1/1:0,9:9:27.08:306,27,0	1/1:1,7:8:18.05:204,18,0	1/1:0,10:10:24.07:272,24,0	1/1:0,11:11:33.09:374,33,0	1/1:0,17:17:48.14:544,48,0	0/0:25,0:25:75.23:0,75,1008	1/1:1,10:11:27.08:306,27,0	1/1:0,18:18:54.15:612,54,0	1/1:0,23:23:66.19:749,66,0	1/1:1,7:8:21.06:238,21,0	1/1:0,11:11:23.98:272,24,0	1/1:3,22:25:63.18:714,63,0	1/1:1,8:9:24.07:272,24,0	0/0:29,0:29:81.27:0,81,1108	1/1:0,7:7:18.05:204,18,0	0/0:4,0:4:12.04:0,12,164
chr10	99464607	.	TC	T	1547.62	PASS	AC=38;AF=0.792;AN=48;BaseQRankSum=8.677;DP=164;FS=34.115;HRun=1;HaplotypeScore=29.1002;InbreedingCoeff=0.5947;MQ=130.74;MQ0=0;MQRankSum=-6.276;QD=20.63;ReadPosRankSum=-5.625;VQSLOD=0.5653;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:6:8.50:68,8,0	1/1:1,0:1:3.01:38,3,0	0/0:18,0:18:54.16:0,54,821	0/0:20,0:20:57.19:0,57,911	1/1:0,1:1:3.01:41,3,0	1/1:0,12:13:5.85:56,6,0	1/1:0,5:6:11.91:140,12,0	1/1:0,11:11:24.07:316,24,0	1/1:0,5:5:9.03:125,9,0	1/1:0,2:2:6:65,6,0	1/1:0,4:4:6.02:79,6,0	1/1:0,1:1:3.01:42,3,0	1/1:0,3:3:9.03:123,9,0	1/1:0,2:2:6.02:84,6,0	1/1:0,4:4:6.02:83,6,0	1/1:0,1:1:3.01:41,3,0	1/1:0,3:3:2.97:20,3,0	0/0:15,0:15:45.15:0,45,719	1/1:0,4:4:12:131,12,0	1/1:0,4:4:12.04:168,12,0	1/1:0,1:1:3.01:42,3,0	1/1:0,2:2:3.01:42,3,0	./.	./.	./.	0/0:30,0:30:90.30:0,90,1419	./.	0/0:3,0:3:9.03:0,9,144
chr10	99464760	.	C	CT	1175.73	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=-0.663;DP=453;FS=31.560;HRun=6;HaplotypeScore=72.2487;InbreedingCoeff=0.9282;MQ=107.05;MQ0=0;MQRankSum=-3.599;QD=29.39;ReadPosRankSum=1.596;VQSLOD=1.6907;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:72.15:0,72,728	0/0:3,0:3:9.02:0,9,92	0/0:34,0:34:87.07:0,87,860	0/0:31,0:29:78.16:0,78,784	0/0:7,0:7:18.04:0,18,184	0/0:14,0:14:33.07:0,33,336	0/0:13,0:13:39.09:0,39,398	0/0:27,0:27:66.12:0,66,663	0/0:13,0:13:36.08:0,36,367	0/0:13,0:13:39.09:0,39,398	0/0:11,0:11:30.05:0,30,300	0/0:10,0:10:27.06:0,27,275	0/0:13,0:13:39.09:0,39,398	0/0:17,0:17:42.09:0,42,429	0/0:12,0:12:30.05:0,30,299	0/0:11,0:11:30.05:0,30,298	0/0:28,0:28:81.18:0,81,826	0/0:27,0:27:75.11:0,75,746	0/0:17,0:17:51.11:0,51,515	0/0:10,0:10:30.07:0,30,306	0/0:22,0:22:66.15:0,66,673	0/0:12,0:12:30.07:0,30,306	0/0:11,0:11:33.07:0,33,336	0/0:9,0:9:21.02:0,21,206	0/0:8,0:8:24.05:0,24,245	1/1:6,34:40:99:1270,102,0	0/0:11,0:11:30.07:0,30,306	./.
chr10	99465466	.	C	CT	22559.59	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-9.719;DP=642;FS=4.219;HRun=1;HaplotypeScore=57.8177;InbreedingCoeff=0.9988;MQ=79.79;MQ0=0;MQRankSum=-7.845;QD=38.63;ReadPosRankSum=4.633;VQSLOD=5.3766;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:90.30:1332,90,0	1/1:0,9:9:27.09:399,27,0	0/0:21,0:21:54.12:0,54,640	0/0:21,0:20:51.13:0,51,598	1/1:0,16:16:39.09:543,39,0	1/1:0,21:21:63.21:932,63,0	1/1:0,22:22:54.18:799,54,0	1/1:1,25:26:75.17:1009,75,0	1/1:1,24:25:63.16:907,63,0	1/1:0,32:32:93.30:1352,93,0	1/1:1,19:20:57.15:817,57,0	1/1:2,22:24:60.20:888,60,0	1/1:0,21:21:54.13:799,54,0	1/1:2,17:19:45.15:666,45,0	1/1:1,27:28:78.26:1154,78,0	1/1:2,25:27:69.23:1021,69,0	1/1:0,35:35:78.26:1154,78,0	0/0:16,0:16:48.12:0,48,591	1/1:0,13:13:39.10:539,39,0	1/1:0,27:27:75.20:1078,75,0	1/1:0,20:20:48.16:710,48,0	1/1:0,24:25:60.20:886,60,0	1/1:0,19:19:48.05:710,48,0	1/1:0,41:41:99:1776,120,0	1/1:0,21:21:51.13:729,51,0	1/1:1,26:27:78.23:1116,78,0	1/1:1,22:23:60.20:888,60,0	1/1:0,9:9:24.08:355,24,0
chr10	99465951	.	C	CAT	15608.39	PASS	AB=0.917;AC=47;AF=0.839;AN=56;BaseQRankSum=4.066;DP=402;FS=1.920;HRun=0;HaplotypeScore=93.5789;InbreedingCoeff=0.8559;MQ=60.14;MQ0=0;MQRankSum=-7.580;QD=43.72;ReadPosRankSum=1.344;VQSLOD=6.5481;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:36.12:624,36,0	1/1:0,7:9:24.08:419,24,0	0/0:17,0:16:40.94:0,41,627	0/0:8,0:5:15.85:0,16,279	1/1:0,23:23:60.20:1037,60,0	1/1:5,12:17:41.99:682,42,0	1/1:4,6:10:20.97:329,21,0	1/1:4,14:18:51.08:822,51,0	1/1:1,13:14:42.08:717,42,0	1/1:8,15:23:57.07:910,57,0	1/1:4,16:20:48.08:821,48,0	1/1:0,13:13:36.12:645,36,0	1/1:3,8:12:30.10:532,30,0	1/1:2,13:15:45.01:735,45,0	1/1:4,14:18:51.01:842,51,0	1/1:3,7:10:20.98:341,21,0	1/1:2,8:10:30.02:462,30,0	0/0:7,0:7:21.02:0,21,270	1/1:2,13:15:45.11:769,45,0	1/1:0,19:20:57.20:1021,57,0	1/1:2,4:6:14.97:262,15,0	1/1:1,11:12:33.09:585,33,0	1/1:0,15:15:42.14:732,42,0	1/1:1,11:12:18.53:323,19,0	1/1:0,20:20:57.20:1020,57,0	0/1:10,1:11:20.75:21,0,368	1/1:5,15:20:57.13:957,57,0	0/0:13,0:13:36.12:0,36,503
chr10	99466237	.	TC	T	13088.97	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=3.944;DP=602;FS=0.000;HRun=8;HaplotypeScore=131.7063;InbreedingCoeff=0.9948;MQ=66.98;MQ0=0;MQRankSum=-5.310;QD=23.63;ReadPosRankSum=5.330;VQSLOD=3.2581;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:81.12:781,81,0	1/1:2,10:12:27.04:259,27,0	0/0:16,0:15:24.01:0,24,249	0/0:19,0:19:42.82:0,43,409	1/1:3,20:23:45.07:434,45,0	1/1:5,13:18:39.02:370,39,0	1/1:8,17:25:60.09:576,60,0	1/1:8,26:34:72.06:677,72,0	1/1:2,13:15:42.04:398,42,0	1/1:5,18:22:54.08:520,54,0	1/1:0,9:9:27.04:260,27,0	1/1:0,25:26:72.10:689,72,0	1/1:5,15:20:48.05:452,48,0	1/1:2,29:31:81.12:778,81,0	1/1:0,24:24:69.11:665,69,0	1/1:2,16:20:57.06:538,57,0	1/1:4,24:28:66.06:626,66,0	0/0:13,0:13:36.11:0,36,434	1/1:3,13:16:44.99:417,45,0	1/1:6,17:23:51.07:492,51,0	1/1:0,33:33:93.15:898,93,0	1/1:1,17:18:48.03:453,48,0	1/1:5,14:19:48.01:448,48,0	1/1:6,22:29:63.54:602,64,0	1/1:5,14:19:36.05:347,36,0	1/1:5,21:26:66.10:638,66,0	1/1:3,19:22:66.04:621,66,0	1/1:3,5:8:17.06:150,17,0
chr10	99466304	.	C	CGAG	34003.51	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.979;DP=674;FS=7.103;HRun=0;HaplotypeScore=166.5441;InbreedingCoeff=0.9936;MQ=77.87;MQ0=0;MQRankSum=-9.220;QD=55.56;ReadPosRankSum=2.317;VQSLOD=6.2700;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,35:47:99:2666,120,0	1/1:0,9:9:27.09:620,27,0	0/0:21,0:21:54.11:0,54,847	0/0:21,0:21:48.28:0,48,785	1/1:6,22:28:69.24:1450,69,0	1/1:2,14:17:45.15:1003,45,0	1/1:4,20:24:66.23:1466,66,0	1/1:9,22:31:87.30:1956,87,0	1/1:2,18:20:60.21:1357,60,0	1/1:7,24:31:87.29:1905,87,0	1/1:1,11:14:27.09:615,27,0	1/1:10,19:29:75.24:1596,75,0	1/1:2,15:17:48.16:1085,48,0	1/1:7,21:28:75.20:1565,75,0	1/1:5,22:27:75.19:1589,75,0	1/1:2,26:28:84.27:1875,84,0	1/1:6,23:31:63.22:1399,63,0	0/0:20,0:20:54.18:0,54,921	1/1:8,13:21:57.19:1243,57,0	1/1:3,16:19:51.14:1106,51,0	1/1:11,35:49:99:2220,102,0	1/1:1,17:18:45.15:925,45,0	1/1:4,16:20:48.16:1027,48,0	1/1:3,26:29:75.20:1673,75,0	1/1:1,13:14:39.09:843,39,0	1/1:5,0:27:69.03:1071,69,0	1/1:3,22:27:69.23:1492,69,0	1/1:0,0:6:15.05:257,15,0
chr10	99466699	.	CGTGTGTGT	C	6210.97	PASS	AB=0.909;AC=36;AF=0.692;AN=52;BaseQRankSum=3.760;DP=590;FS=2.985;HRun=0;HaplotypeScore=159.2922;InbreedingCoeff=0.6491;MQ=59.32;MQ0=7;MQRankSum=-5.853;QD=15.34;ReadPosRankSum=2.391;VQSLOD=3.9020;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:43:15.03:0,15,455	1/1:3,5:7:15.05:354,15,0	0/0:19,0:10:2.98:0,3,21	./.	1/1:12,7:19:11.15:173,11,0	0/0:13,0:19:9.20:0,9,346	0/0:12,0:18:18.04:0,18,585	1/1:25,0:25:2.14:25,2,0	1/1:8,9:17:11.44:234,11,0	1/1:19,10:30:19.55:359,20,0	1/1:11,1:13:12.02:183,12,0	1/1:12,13:25:18.06:450,18,0	1/1:4,14:19:12.04:280,12,0	1/1:10,12:23:18.06:431,18,0	1/1:13,10:24:24.08:581,24,0	1/1:13,13:30:33.11:749,33,0	0/0:14,0:20:20.03:0,20,460	0/0:15,0:19:42.10:0,42,1223	1/1:16,6:21:4.85:114,5,0	1/1:13,3:17:18.05:364,18,0	./.	1/1:7,6:13:6.02:115,6,0	1/1:6,8:15:9.03:206,9,0	0/1:15,3:18:64.54:218,0,65	1/1:9,15:25:24.08:601,24,0	0/1:22,1:25:26.96:27,0,1338	1/1:16,19:37:33.58:746,34,0	0/0:6,0:6:6.49:0,6,165
chr10	99467677	.	CGTGT	C	5733.57	PASS	AB=0.681;AC=36;AF=0.643;AN=56;BaseQRankSum=-3.079;DP=601;FS=0.523;HRun=0;HaplotypeScore=111.8868;InbreedingCoeff=0.5167;MQ=67.76;MQ0=7;MQRankSum=1.753;QD=12.46;ReadPosRankSum=2.048;VQSLOD=4.1161;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,12:39:36.10:512,36,0	1/1:4,7:12:15.51:199,16,0	0/0:28,0:18:6.02:0,6,143	0/0:27,0:16:3.01:0,3,46	0/0:14,0:17:13.99:0,14,92	1/1:8,6:15:21.06:313,21,0	0/1:11,12:25:0.41:420,0,0	1/1:26,5:31:18.04:243,18,0	1/1:12,8:19:12.04:190,12,0	0/1:11,2:18:99:115,0,115	0/1:7,1:19:19.87:20,0,116	1/1:11,6:18:21.06:314,21,0	1/1:13,9:22:20.11:312,20,0	1/1:5,6:12:14.98:209,15,0	1/1:11,12:22:30.10:456,30,0	1/1:6,4:12:15.04:199,15,0	0/0:18,0:25:14.98:0,15,213	0/1:22,1:29:1.06:1,0,570	0/0:16,0:16:18.06:0,18,376	1/1:14,10:27:33.09:465,33,0	1/1:23,8:31:12.04:190,12,0	1/1:7,8:15:18.06:285,18,0	1/1:8,8:16:9.03:143,9,0	0/1:16,12:27:7.77:485,0,8	0/1:6,1:17:60.69:67,0,61	0/0:21,0:21:42.14:0,42,814	1/1:10,13:26:32.18:595,32,0	0/0:5,0:5:5.99:0,6,48
chr10	99467892	.	CA	C	117.43	PASS	AB=0.579;AC=1;AF=0.019;AN=54;BaseQRankSum=3.099;DP=535;FS=18.742;HRun=1;HaplotypeScore=113.4404;InbreedingCoeff=-0.0190;MQ=69.77;MQ0=0;MQRankSum=-4.100;QD=10.68;ReadPosRankSum=-0.505;VQSLOD=0.3936;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1733	0/0:9,0:9:27.09:0,27,430	0/0:23,0:20:60.19:0,60,913	0/0:10,0:10:24.14:0,24,330	0/0:21,0:21:63.21:0,63,1007	0/0:16,0:16:48.16:0,48,767	0/0:16,0:16:48.15:0,48,743	0/0:31,0:31:93.31:0,93,1466	0/0:22,0:22:66.23:0,66,1055	0/0:25,0:25:75.26:0,75,1198	0/0:21,0:21:63.21:0,63,1004	0/0:14,0:14:42.13:0,42,648	0/0:20,0:20:60.20:0,60,958	0/0:16,0:16:48.16:0,48,765	0/0:19,0:19:57.19:0,57,911	0/0:15,0:15:45.14:0,45,686	0/0:36,0:36:99:0,108,1726	0/0:16,0:16:48.13:0,48,728	0/0:28,0:28:84.29:0,84,1343	0/0:22,0:22:66.21:0,66,1029	0/0:9,0:9:27.09:0,27,431	0/0:14,0:14:42.14:0,42,669	0/0:19,0:19:57.19:0,57,910	0/0:11,0:11:33.10:0,33,503	0/0:22,0:22:66.23:0,66,1055	0/1:3,8:11:71.91:192,0,72	0/0:32,0:32:96.33:0,96,1528	./.
chr10	99467910	.	G	GA	100.35	PASS	AB=0.588;AC=1;AF=0.019;AN=54;BaseQRankSum=2.847;DP=537;FS=10.712;HRun=5;HaplotypeScore=113.4144;InbreedingCoeff=-0.0130;MQ=67.13;MQ0=0;MQRankSum=-0.591;QD=10.03;ReadPosRankSum=-2.351;VQSLOD=0.3630;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:99:0,99,1383	0/0:8,0:8:24.08:0,24,335	0/0:17,0:17:17.60:0,18,365	0/0:11,0:10:11.94:0,12,248	0/0:19,0:20:59.84:0,60,767	0/0:16,0:16:48.16:0,48,670	0/0:24,0:24:69.21:0,69,941	0/0:31,0:31:93.31:0,93,1300	0/0:26,0:26:72.24:0,72,1004	0/0:22,0:22:66.22:0,66,922	0/0:18,0:18:54.18:0,54,755	0/0:12,0:12:36.10:0,36,484	0/0:18,0:18:54.18:0,54,752	0/0:18,0:18:54.18:0,54,754	0/0:18,0:17:54.18:0,54,755	0/0:16,0:16:48.16:0,48,671	0/0:37,0:37:99:0,111,1547	0/0:18,0:18:51.14:0,51,691	0/0:25,0:25:75.24:0,75,1032	0/0:31,0:31:87.26:0,87,1180	0/0:10,0:10:30.09:0,30,391	0/0:14,0:14:42.14:0,42,587	0/0:19,0:19:57.17:0,57,778	0/0:14,0:14:42.12:0,42,566	0/0:20,0:20:60.19:0,60,825	0/1:3,7:10:23.95:175,0,24	0/0:30,0:30:90.30:0,90,1257	./.
chr10	99468131	.	A	AT	334.64	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.609;DP=539;FS=16.080;HRun=5;HaplotypeScore=96.3651;InbreedingCoeff=0.8210;MQ=71.19;MQ0=0;MQRankSum=-5.377;QD=11.95;ReadPosRankSum=1.383;VQSLOD=1.3050;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.17:0,72,766	0/0:10,0:10:29.94:0,30,305	0/0:16,0:16:10.44:0,10,182	0/0:8,0:8:20.64:0,21,199	0/0:28,0:28:80.90:0,81,827	0/0:16,0:16:45.11:0,45,483	0/0:18,0:18:45.10:0,45,472	0/0:36,0:36:91.16:0,91,958	0/0:23,0:23:59.93:0,60,615	0/0:27,0:27:72.64:0,73,766	0/0:18,0:18:50.91:0,51,520	0/0:20,0:20:57.14:0,57,613	0/0:21,0:21:60.14:0,60,636	0/0:20,0:20:57.06:0,57,595	0/0:19,0:19:57.12:0,57,598	0/0:24,0:24:63.13:0,63,660	0/0:32,0:32:87.22:0,87,932	0/0:18,0:18:51.06:0,51,525	0/0:14,0:14:36.06:0,36,371	0/0:19,0:19:54.05:0,54,556	0/0:15,0:15:42.02:0,42,435	0/0:12,0:12:36.08:0,36,378	0/0:13,0:13:39.10:0,39,417	0/0:19,0:19:54.13:0,54,578	0/0:12,0:12:36.08:0,36,375	1/1:9,14:23:6.76:396,7,0	0/0:28,0:28:78.19:0,78,835	1/1:3,2:5:3.01:37,3,0
chr10	99468478	.	ATTG	A	21915.78	PASS	AB=0.526;AC=49;AF=0.875;AN=56;BaseQRankSum=3.603;DP=660;FS=5.115;HRun=0;HaplotypeScore=132.0747;InbreedingCoeff=0.8344;MQ=54.88;MQ0=6;MQRankSum=-1.488;QD=37.27;ReadPosRankSum=2.516;VQSLOD=6.0219;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,37:38:52.67:1394,53,0	1/1:1,7:8:18.06:271,18,0	0/0:21,0:14:36.12:0,36,710	0/0:24,0:20:39.10:0,39,764	1/1:4,21:25:54.14:835,54,0	1/1:1,16:17:42.14:673,42,0	1/1:5,26:31:48.16:769,48,0	1/1:5,33:33:72.19:1082,72,0	1/1:0,17:17:39.13:617,39,0	1/1:1,21:22:63.18:941,63,0	1/1:0,25:25:69.19:1078,69,0	0/1:2,18:20:56.32:798,0,56	1/1:0,22:22:63.21:1011,63,0	1/1:0,28:28:75.26:1202,75,0	1/1:0,25:25:69.19:1071,69,0	1/1:0,21:21:54.18:858,54,0	1/1:0,23:23:66.22:1049,66,0	0/0:27,0:27:72.25:0,72,1524	1/1:2,18:19:44.83:607,45,0	1/1:2,16:18:41.96:559,42,0	1/1:4,28:28:57.11:859,57,0	1/1:2,24:26:72.15:1095,72,0	1/1:0,22:22:56.66:915,57,0	1/1:1,22:23:63.21:1011,63,0	1/1:0,17:17:39.06:595,39,0	1/1:3,33:36:90.26:1393,90,0	1/1:4,16:21:39.13:625,39,0	1/1:1,12:13:39.13:605,39,0
chr10	99468812	.	AT	A	12208.93	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=5.362;DP=662;FS=1.463;HRun=10;HaplotypeScore=151.7520;InbreedingCoeff=0.7852;MQ=69.55;MQ0=0;MQRankSum=-2.893;QD=19.50;ReadPosRankSum=1.216;VQSLOD=3.4980;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,35:41:89.96:781,90,0	1/1:1,7:8:14.98:130,15,0	0/0:14,1:13:6.66:0,7,226	0/1:13,0:13:5.37:5,0,107	1/1:2,26:28:50.86:433,51,0	1/1:3,26:29:71.98:625,72,0	1/1:4,13:17:32.99:286,33,0	1/1:6,37:43:99:934,108,0	1/1:3,23:26:53.98:469,54,0	1/1:2,29:31:86.97:752,87,0	1/1:2,22:24:50.96:443,51,0	1/1:2,24:26:62.99:547,63,0	1/1:0,23:23:59.98:521,60,0	1/1:3,15:18:38.99:339,39,0	1/1:3,22:25:62.98:547,63,0	1/1:3,28:31:77.97:677,78,0	1/1:1,24:25:71.98:625,72,0	0/0:21,0:21:51.14:0,51,564	1/1:5,22:27:62.97:547,63,0	1/1:1,22:23:53.93:462,54,0	1/1:1,15:16:44.99:391,45,0	1/1:4,24:28:65.98:573,66,0	1/1:0,26:26:68.92:592,69,0	1/1:1,12:13:32.99:286,33,0	1/1:3,17:20:47.91:408,48,0	1/1:2,0:19:33.84:99,34,0	1/1:3,26:29:77.98:677,78,0	1/1:6,0:17:20.37:60,20,0
chr10	99469031	.	TC	T	22626.64	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=12.423;DP=702;FS=2.141;HRun=2;HaplotypeScore=235.9381;InbreedingCoeff=0.9990;MQ=71.68;MQ0=0;MQRankSum=-6.916;QD=38.74;ReadPosRankSum=4.417;VQSLOD=4.0498;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:99:1412,102,0	1/1:0,10:10:21.07:294,21,0	0/0:26,0:26:78.26:0,78,1210	0/0:25,0:25:72.24:0,72,1121	1/1:0,25:25:72.24:1007,72,0	1/1:0,27:27:75.25:1049,75,0	1/1:0,16:16:45.15:629,45,0	1/1:0,32:32:96.30:1324,96,0	1/1:0,23:23:66.22:922,66,0	1/1:1,28:29:87.29:1211,87,0	1/1:0,29:29:84.28:1173,84,0	1/1:0,22:22:60.20:839,60,0	1/1:0,21:21:60.20:838,60,0	1/1:0,24:24:60.20:838,60,0	1/1:1,34:35:93.31:1294,93,0	1/1:0,25:25:69.23:959,69,0	1/1:0,23:23:57.19:790,57,0	0/0:13,0:13:36.12:0,36,576	1/1:0,17:17:51.17:711,51,0	1/1:0,35:35:93.31:1300,93,0	1/1:0,24:24:66.22:923,66,0	1/1:0,27:27:78.26:1090,78,0	1/1:0,30:30:72.24:1007,72,0	1/1:0,14:14:42.14:587,42,0	1/1:0,29:29:84.28:1174,84,0	0/0:23,0:23:69.04:0,69,930	1/1:0,31:31:90.30:1256,90,0	0/0:31,0:31:93.30:0,93,1274
chr10	99469633	.	A	AT	20987.06	PASS	AB=0.870;AC=47;AF=0.839;AN=56;BaseQRankSum=2.582;DP=650;FS=0.842;HRun=1;HaplotypeScore=79.8746;InbreedingCoeff=0.8675;MQ=84.14;MQ0=0;MQRankSum=-4.671;QD=37.08;ReadPosRankSum=2.754;VQSLOD=5.4004;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,38:40:93.32:1393,93,0	1/1:1,12:13:39.13:574,39,0	0/0:20,0:20:54.04:0,54,638	0/0:21,0:21:58.30:0,58,708	1/1:1,24:25:66.22:979,66,0	1/1:0,27:27:72.24:1077,72,0	1/1:1,21:22:60.20:899,60,0	1/1:2,29:31:84.26:1217,84,0	1/1:0,18:18:45.15:674,45,0	1/1:1,23:24:66.22:989,66,0	1/1:0,11:11:30.10:449,30,0	1/1:2,20:22:48.16:716,48,0	1/1:0,22:22:51.17:764,51,0	1/1:0,30:30:72.24:1078,72,0	1/1:0,33:32:81.21:1186,81,0	1/1:0,18:18:51.17:762,51,0	1/1:0,17:17:45.15:674,45,0	0/0:15,0:15:42.13:0,42,529	1/1:2,22:24:63.20:921,63,0	1/1:0,20:20:51.04:689,51,0	1/1:1,27:28:72.24:1079,72,0	1/1:1,19:20:51.17:763,51,0	1/1:1,19:20:57.19:843,57,0	1/1:0,20:20:51.17:764,51,0	1/1:0,28:27:84.28:1257,84,0	0/1:17,3:20:74.73:75,0,585	1/1:2,31:33:78.26:1167,78,0	0/0:28,0:28:84.23:0,84,1056
chr10	99469861	.	CA	C	5445.76	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=14.267;DP=484;FS=0.436;HRun=2;HaplotypeScore=218.7874;InbreedingCoeff=0.9730;MQ=83.78;MQ0=0;MQRankSum=-12.607;QD=14.29;ReadPosRankSum=3.407;VQSLOD=4.6500;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,6:11:14.81:99,15,0	1/1:1,4:5:11.88:81,12,0	0/0:21,0:21:57.11:0,57,793	0/0:23,0:23:60.16:0,60,823	1/1:6,21:28:53.75:354,54,0	1/1:9,23:32:71.10:476,71,0	1/1:2,11:13:35.28:230,35,0	1/1:14,16:30:53.56:384,54,0	1/1:3,9:12:23.78:172,24,0	1/1:1,12:13:35.76:258,36,0	1/1:5,12:17:26.64:176,27,0	1/1:5,10:15:32.32:209,32,0	1/1:0,8:8:23.70:158,24,0	1/1:8,23:31:62.83:441,63,0	1/1:4,21:25:53.35:365,53,0	1/1:5,6:11:20.69:137,21,0	1/1:3,10:13:23.69:157,24,0	0/0:15,1:16:28.01:0,28,651	1/1:2,7:9:20.89:154,21,0	1/1:3,13:16:38.58:264,39,0	1/1:5,4:9:11.85:79,12,0	1/1:3,9:12:22.75:142,23,0	1/1:4,14:18:38.91:252,39,0	1/1:0,6:6:14.80:98,15,0	1/1:6,18:24:56.35:380,56,0	0/0:24,1:25:54.51:0,55,1041	1/1:3,19:22:56.35:380,56,0	0/0:18,0:18:54.18:0,54,809
chr10	99469862	.	A	AT	1796.14	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=14.211;DP=415;FS=0.000;HRun=0;HaplotypeScore=223.7549;InbreedingCoeff=0.9233;MQ=87.96;MQ0=0;MQRankSum=-13.063;QD=5.74;ReadPosRankSum=3.431;VQSLOD=3.1915;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:9.75:29,10,0	1/1:5,0:5:8.33:26,8,0	0/0:20,0:20:57.05:0,57,751	0/0:22,0:22:60.18:0,60,773	1/1:23,0:22:33.80:124,34,0	1/1:23,5:28:49.80:160,50,0	1/1:11,2:13:24.76:98,25,0	1/1:16,0:18:43.92:185,44,0	1/1:9,0:9:17.27:75,17,0	1/1:12,0:12:27.68:91,28,0	1/1:12,0:14:17.01:51,17,0	1/1:10,1:11:22.72:93,23,0	1/1:8,0:8:15.60:47,16,0	1/1:23,5:28:47.95:181,48,0	1/1:21,0:21:35.66:128,36,0	1/1:6,1:7:15.20:51,15,0	1/1:10,0:10:15.87:49,16,0	0/0:17,0:17:41:0,41,620	1/1:7,0:7:17.57:69,18,0	1/1:15,0:15:27.18:97,27,0	1/1:4,3:7:7.89:24,8,0	1/1:9,0:10:13.16:39,13,0	1/1:14,0:16:23.71:70,24,0	1/1:6,0:6:9.53:28,10,0	1/1:18,2:20:39.68:146,40,0	0/0:25,0:25:67.69:0,68,985	1/1:19,0:19:38.34:116,38,0	0/0:18,0:18:54.18:0,54,755
chr10	99469864	.	TCTGTGTGTCAAA	T	27024.20	PASS	AB=0.951;AC=48;AF=0.857;AN=56;BaseQRankSum=13.839;DP=401;FS=0.436;HRun=0;HaplotypeScore=222.4682;InbreedingCoeff=0.6865;MQ=87.81;MQ0=0;MQRankSum=-13.114;QD=79.02;ReadPosRankSum=3.617;VQSLOD=4.4818;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:6:18.06:533,18,0	1/1:0,4:4:12.04:400,12,0	0/0:20,0:20:59.77:0,60,2970	0/0:21,0:21:59.01:0,59,2857	1/1:3,20:22:57.09:1769,57,0	1/1:2,23:25:72.25:2376,72,0	1/1:1,11:12:36.12:1163,36,0	1/1:2,16:18:53.85:1688,54,0	1/1:2,7:9:23.97:715,24,0	1/1:0,12:12:36.12:1214,36,0	1/1:2,12:14:27.09:893,27,0	1/1:1,10:11:33.11:1063,33,0	1/1:0,8:8:24.08:795,24,0	1/1:2,23:25:72.25:2382,72,0	1/1:1,18:19:57.09:1768,57,0	1/1:1,6:7:21.07:683,21,0	1/1:2,8:10:24.08:795,24,0	0/1:15,1:16:51.66:52,0,2501	1/1:0,7:7:21.07:712,21,0	1/1:0,15:15:36.12:1196,36,0	1/1:1,4:5:12.04:398,12,0	1/1:1,9:10:24.08:778,24,0	1/1:2,14:16:42.14:1361,42,0	1/1:0,6:6:15.05:496,15,0	1/1:2,18:20:57.20:1874,57,0	0/1:24,1:25:25.20:25,0,4145	1/1:0,19:19:57.20:1894,57,0	0/0:18,0:18:54.19:0,54,3432
chr10	99470117	.	C	CCAT	7752.55	PASS	AB=0.565;AC=35;AF=0.625;AN=56;BaseQRankSum=2.511;DP=539;FS=14.442;HRun=0;HaplotypeScore=104.3293;InbreedingCoeff=0.8519;MQ=58.75;MQ0=10;MQRankSum=0.457;QD=19.24;ReadPosRankSum=6.525;VQSLOD=3.0651;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,21:36:15.08:262,15,0	1/1:0,2:2:3.01:61,3,0	0/0:27,0:11:19.71:0,20,220	0/0:25,0:12:12.04:0,12,160	0/0:8,0:8:18.06:0,18,258	1/1:2,21:23:18.04:360,18,0	0/1:6,19:26:28.31:221,0,28	1/1:5,8:15:33:489,33,0	1/1:5,20:27:21.07:405,21,0	0/0:11,0:11:27.02:0,27,352	0/0:13,0:12:24.05:0,24,307	1/1:5,21:28:39.05:790,39,0	1/1:5,26:33:32.92:784,33,0	1/1:5,19:24:24.08:444,24,0	1/1:6,26:32:32.98:652,33,0	1/1:8,25:33:45.15:916,45,0	0/0:12,0:12:20.92:0,21,251	0/0:16,0:16:38.97:0,39,473	1/1:11,0:11:27.04:454,27,0	1/1:4,10:13:12.04:215,12,0	1/1:13,14:26:18.06:342,18,0	1/1:2,15:17:18.06:345,18,0	1/1:5,10:16:8.51:156,9,0	1/1:2,19:23:21.07:430,21,0	0/0:9,0:9:14.91:0,15,152	0/0:13,0:13:26.98:0,27,341	1/1:2,13:16:20.93:430,21,0	0/0:2,0:2:6.02:0,6,86
chr10	99470119	.	A	ATCA	7788.43	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=2.409;DP=550;FS=12.947;HRun=0;HaplotypeScore=107.4908;InbreedingCoeff=0.8530;MQ=59.08;MQ0=10;MQRankSum=-0.877;QD=18.90;ReadPosRankSum=6.470;VQSLOD=3.4311;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:18.09:297,18,0	1/1:2,0:2:3.01:61,3,0	0/0:28,0:13:19.71:0,20,220	0/0:22,0:11:12.04:0,12,160	0/0:8,0:8:18.06:0,18,258	1/1:23,0:23:18.06:360,18,0	0/1:25,0:25:28.31:221,0,28	1/1:14,0:14:33:489,33,0	1/1:27,0:27:21.07:405,21,0	0/0:12,0:12:27.02:0,27,352	0/0:14,0:13:24.05:0,24,307	1/1:29,0:29:39.05:790,39,0	1/1:33,0:33:32.92:784,33,0	1/1:24,0:24:24.08:444,24,0	1/1:33,0:33:32.98:652,33,0	1/1:34,0:34:45.15:916,45,0	0/0:13,0:13:20.92:0,21,251	0/0:16,0:16:38.97:0,39,473	1/1:6,5:12:27.04:454,27,0	1/1:15,0:14:12.04:215,12,0	1/1:28,0:27:18.06:342,18,0	1/1:18,0:18:18.06:345,18,0	1/1:16,0:17:8.51:156,9,0	1/1:23,0:23:21.07:430,21,0	0/0:9,0:9:14.91:0,15,152	0/0:13,0:13:26.98:0,27,341	1/1:18,0:18:20.93:430,21,0	0/0:2,0:2:6.02:0,6,86
chr10	99470640	.	TAGCAGTTGATAA	T	30075.32	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=7.309;DP=555;FS=6.375;HRun=0;HaplotypeScore=222.1998;InbreedingCoeff=0.9659;MQ=72.80;MQ0=0;MQRankSum=-10.318;QD=59.91;ReadPosRankSum=5.791;VQSLOD=3.6268;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,27:40:63.22:2097,63,0	1/1:2,9:11:12.04:434,12,0	0/0:21,0:21:48.14:0,48,1989	0/0:19,0:19:49.36:0,49,2018	1/1:7,9:16:15.05:347,15,0	1/1:2,17:19:27.09:975,27,0	1/1:2,15:17:42.14:1468,42,0	1/1:17,16:32:45.12:1459,45,0	1/1:8,16:24:42.14:1518,42,0	1/1:8,4:12:15.05:542,15,0	1/1:3,11:14:21.07:759,21,0	1/1:7,17:24:44.80:1615,45,0	1/1:3,14:17:39.13:1410,39,0	1/1:2,18:20:51.17:1727,51,0	1/1:7,17:24:45.15:1627,45,0	1/1:3,16:19:45.15:1579,45,0	1/1:5,10:15:24.97:869,25,0	0/0:13,0:13:39.13:0,39,2179	1/1:9,13:22:39.12:1206,39,0	1/1:7,21:28:54.18:1698,54,0	1/1:11,10:21:21.07:657,21,0	1/1:4,15:19:39.13:1233,39,0	1/1:7,10:17:33.11:1070,33,0	1/1:8,6:14:15.05:491,15,0	1/1:4,16:20:33.11:1142,33,0	1/1:4,16:20:45.15:1548,45,0	1/1:6,21:27:54.19:1952,54,0	1/1:1,8:9:18.06:650,18,0
chr10	99471212	.	CCATAACACAGACCTAAGT	C	2811.25	PASS	AB=0.550;AC=3;AF=0.054;AN=56;BaseQRankSum=7.640;DP=802;FS=0.827;HRun=0;HaplotypeScore=369.4959;InbreedingCoeff=0.6199;MQ=73.02;MQ0=1;MQRankSum=-5.471;QD=82.68;ReadPosRankSum=1.390;VQSLOD=2.5217;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,9208	0/0:12,0:12:33.11:0,33,2854	0/0:27,0:27:78.26:0,78,4046	0/0:25,0:25:72.21:0,72,4428	0/0:30,0:30:90.30:0,90,7028	0/0:38,0:38:99:0,114,8595	0/0:23,0:23:69.24:0,69,5935	0/0:33,0:33:96.33:0,96,7982	0/0:30,0:30:90.31:0,90,7474	0/0:38,0:38:99:0,114,8927	0/0:28,0:28:81.24:0,81,6016	0/0:21,0:21:60.21:0,60,5225	0/0:40,0:40:99:0,117,9726	0/0:28,0:28:84.27:0,84,6752	0/0:29,0:29:87.30:0,87,7220	0/0:39,0:39:99:0,114,8693	0/0:19,0:19:51.18:0,51,4169	0/0:20,0:20:54.11:0,54,3496	0/0:26,0:26:72.25:0,72,4957	0/0:36,0:36:99:0,108,9016	0/0:29,0:29:84.27:0,84,6410	0/0:28,0:28:84.27:0,84,6204	0/0:38,0:38:99:0,114,9534	0/0:36,0:35:99:0,105,8464	0/0:27,0:27:81.28:0,81,6618	0/1:4,18:22:99:2280,0,212	0/0:29,0:29:81.28:0,81,6298	1/1:3,9:12:12.04:631,12,0
chr10	99471621	.	T	TGTGTGTGTGTG	6453.17	PASS	AB=0.985;AC=21;AF=0.375;AN=56;BaseQRankSum=12.105;DP=595;FS=29.847;HRun=0;HaplotypeScore=197.8656;InbreedingCoeff=-0.6015;MQ=61.21;MQ0=11;MQRankSum=-7.610;QD=15.33;ReadPosRankSum=1.006;VQSLOD=2.1387;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:30:30.91:31,0,462	0/1:13,0:13:99:318,0,261	0/0:53,0:29:63.05:0,63,1003	0/0:33,0:16:31.70:0,32,477	0/0:23,0:22:44.63:0,45,512	0/0:19,0:18:27.32:0,27,240	0/1:30,0:27:99:209,0,421	0/1:39,0:37:99:399,0,862	0/1:14,0:14:99:290,0,135	0/1:29,0:28:99:896,0,500	0/0:15,0:15:17.96:0,18,210	0/1:15,0:15:99:100,0,159	0/1:20,0:20:99:539,0,166	0/1:14,0:14:99:340,0,134	0/1:15,0:15:90.85:584,0,91	0/1:15,0:14:99:316,0,216	0/1:23,0:23:99:241,0,466	0/0:13,0:13:34.86:0,35,481	0/1:14,0:14:99:237,0,327	0/1:24,0:24:99:492,0,391	0/1:13,0:13:71.88:72,0,125	0/1:11,0:11:90.20:90,0,218	0/1:12,9:23:82.73:83,0,148	0/0:18,0:16:17.97:0,18,197	0/1:35,0:35:99:369,0,311	0/1:16,0:16:99:283,0,345	0/1:20,0:20:99:429,0,206	0/1:6,0:6:99:136,0,102
chr10	99471639	.	G	GTGTGTGTGTGTA	10503.85	PASS	AB=0.940;AC=38;AF=0.679;AN=56;BaseQRankSum=2.360;DP=703;FS=2.623;HRun=0;HaplotypeScore=188.4111;InbreedingCoeff=0.3429;MQ=51.63;MQ0=16;MQRankSum=-1.670;QD=19.42;ReadPosRankSum=3.513;VQSLOD=3.7706;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:28:50.29:50,0,62	1/1:2,12:16:14.84:724,15,0	0/0:54,0:18:34.20:0,34,470	0/0:54,0:26:30.74:0,31,384	0/0:19,0:18:2.99:0,3,24	0/0:20,0:19:5.99:0,6,50	0/1:29,0:26:59.61:60,0,126	1/1:43,0:41:46.73:896,47,0	1/1:5,15:23:6.93:461,7,0	0/1:28,0:27:18.63:1072,0,19	0/1:18,0:18:5.96:106,0,6	1/1:5,14:26:5.05:185,5,0	1/1:4,21:29:15.05:835,15,0	1/1:4,12:17:9.03:535,9,0	1/1:2,18:28:18.02:917,18,0	0/1:11,0:24:1.98:463,0,2	1/1:22,0:22:13.92:673,14,0	0/0:12,0:12:20.08:0,20,375	1/1:5,0:14:31.30:752,31,0	1/1:6,20:29:11.89:634,12,0	1/1:15,0:15:20.39:207,20,0	1/1:4,13:21:2.52:178,3,0	1/1:22,1:23:6.01:164,6,0	1/1:8,11:26:3.01:179,3,0	1/1:29,0:32:6.98:471,7,0	0/1:21,0:21:94.40:287,0,94	1/1:3,16:23:12.04:655,12,0	0/0:3,0:3:2.94:0,3,18
chr10	99471647	.	G	GTGTGTGTT	6793.19	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=3.179;DP=607;FS=3.533;HRun=0;HaplotypeScore=206.6688;InbreedingCoeff=-0.2375;MQ=53.30;MQ0=12;MQRankSum=-7.078;QD=14.64;ReadPosRankSum=4.095;VQSLOD=3.8682;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:27:70.36:84,0,70	1/1:11,0:11:18.15:342,18,0	0/0:39,0:17:33.30:0,33,460	0/0:48,0:22:41.70:0,42,402	1/1:17,0:16:2.99:24,3,0	0/1:22,0:21:62.43:74,0,62	0/1:31,0:28:22.77:23,0,147	0/1:40,0:38:99:436,0,445	1/1:14,0:15:9.03:222,9,0	0/1:27,0:26:64.53:678,0,65	0/0:17,0:17:14.01:0,14,104	0/1:16,0:16:14.94:160,0,15	1/1:17,0:17:15.05:407,15,0	1/1:9,0:9:9.03:247,9,0	0/1:23,0:23:24.85:435,0,25	0/1:28,0:27:18.83:591,0,19	0/1:20,0:20:62.75:383,0,63	0/1:10,0:10:51.90:52,0,227	0/1:13,0:12:99:166,0,126	0/1:23,0:23:51.92:224,0,52	0/0:18,0:18:5.20:0,5,133	0/1:19,0:19:55.77:81,0,56	0/1:20,0:20:14.94:111,0,15	0/0:21,0:20:2.05:0,2,42	0/1:32,0:32:69.33:223,0,69	1/1:4,15:24:59.69:1432,60,0	0/1:13,0:13:29.88:305,0,30	1/1:5,0:5:11.95:94,12,0
chr10	99471652	.	TGA	T	2520.17	PASS	AB=0.974;AC=33;AF=0.589;AN=56;BaseQRankSum=-4.652;DP=583;FS=0.477;HRun=0;HaplotypeScore=149.2438;InbreedingCoeff=0.3575;MQ=57.92;MQ0=10;MQRankSum=1.708;QD=5.78;ReadPosRankSum=-0.130;VQSLOD=2.7329;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:29:22.41:162,22,0	0/0:10,0:10:14.12:0,14,54	0/0:38,0:17:47.75:0,48,514	0/0:46,0:23:42.25:0,42,415	0/1:11,5:15:0.01:0,0,0	1/1:22,0:21:14.95:123,15,0	1/1:28,0:25:7.72:179,8,0	1/1:41,0:39:81.22:740,81,0	0/1:16,0:16:3.79:25,0,4	1/1:25,0:24:12.09:221,12,0	1/1:14,0:14:15.21:105,15,0	0/1:15,0:15:8.39:39,0,8	0/0:15,0:15:11.12:0,11,37	0/1:10,0:10:13.71:14,0,15	0/1:23,0:23:13.53:54,0,14	1/1:22,0:21:0.91:83,1,0	1/1:17,1:18:5.64:72,6,0	0/0:9,0:9:14.99:0,15,211	1/1:12,0:11:19.28:176,19,0	0/1:23,0:23:40.42:76,0,40	1/1:17,0:17:19.05:228,19,0	0/1:20,0:20:15.36:117,0,15	1/1:22,0:22:8.02:55,8,0	0/1:18,0:18:3.17:39,0,3	1/1:30,0:30:8.55:162,9,0	0/0:24,0:24:50.34:0,50,594	0/1:13,0:13:8.86:36,0,9	0/0:5,0:5:14.95:0,15,131
chr10	99473855	.	AACAACTGAAGTGTT	A	22950.96	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=16.289;DP=508;FS=8.768;HRun=0;HaplotypeScore=199.4961;InbreedingCoeff=0.8708;MQ=55.13;MQ0=0;MQRankSum=-13.909;QD=67.50;ReadPosRankSum=0.696;VQSLOD=3.8219;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:36.12:1424,36,0	1/1:0,6:6:15.05:629,15,0	0/1:5,0:5:15.02:15,0,336	0/0:4,0:4:6.02:0,6,264	0/0:29,0:29:81.28:0,81,5264	1/1:3,17:20:39.13:1557,39,0	1/1:1,13:14:15.05:629,15,0	1/1:5,13:18:38.87:725,39,0	1/1:1,21:22:42.14:1760,42,0	0/0:43,0:43:99:0,126,7679	0/0:19,0:19:51.18:0,51,3153	1/1:0,27:27:45.15:1885,45,0	1/1:3,19:22:39.13:1634,39,0	1/1:4,14:18:27.09:1131,27,0	1/1:5,31:36:72.25:2999,72,0	1/1:0,18:18:42.14:1760,42,0	0/0:10,0:10:30.10:0,30,1855	0/0:6,0:6:18.06:0,18,1149	1/1:3,14:17:41.99:1146,42,0	1/1:3,15:18:27.06:1025,27,0	1/1:3,13:16:6.02:251,6,0	1/1:3,12:15:24.08:1006,24,0	1/1:2,16:18:27.09:1114,27,0	1/1:2,9:11:9.03:377,9,0	0/0:28,0:28:84.29:0,84,5729	0/0:24,0:24:66.21:0,66,4174	1/1:4,20:24:45.15:1886,45,0	0/0:5,0:5:12.04:0,12,839
chr10	99474104	.	GGTGTGTGTGTGTGTGTGTGTGT	G	1486.38	PASS	AB=0.751;AC=5;AF=0.100;AN=50;BaseQRankSum=2.075;DP=522;FS=4.810;HRun=0;HaplotypeScore=192.6109;InbreedingCoeff=0.0980;MQ=57.19;MQ0=115;MQRankSum=-2.860;QD=19.30;ReadPosRankSum=2.125;VQSLOD=1.8221;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:3:3.01:0,3,140	0/0:32,0:18:4.26:0,4,45	0/0:31,0:21:2.98:0,3,21	0/1:11,8:18:11.99:346,0,12	./.	0/0:24,0:16:17.90:0,18,502	0/0:19,0:12:6.02:0,6,138	./.	0/1:13,4:15:22.53:181,0,23	0/1:13,7:20:25.46:160,0,25	0/0:19,0:10:6.02:0,6,272	0/0:11,0:8:7.84:0,8,160	0/0:9,0:6:1.82:0,2,5	0/0:26,0:18:18.06:0,18,737	0/0:14,0:8:3.01:0,3,61	0/0:16,0:15:27.09:0,27,1982	0/0:11,0:13:24.02:0,24,1193	0/0:24,0:12:6:0,6,56	0/0:13,0:6:6.02:0,6,236	0/0:25,0:11:3.01:0,3,96	0/0:24,0:11:6:0,6,124	0/0:23,0:15:12.04:0,12,509	0/0:12,0:4:2.99:0,3,23	1/1:7,13:21:18.06:914,18,0	0/0:26,0:23:21.07:0,21,935	0/0:12,0:6:3.01:0,3,101	0/0:10,0:9:21.07:0,21,1513
chr10	99474105	.	G	GT	2779.98	PASS	AC=32;AF=0.593;AN=54;BaseQRankSum=6.862;DP=531;FS=81.097;HRun=1;HaplotypeScore=76.4503;InbreedingCoeff=0.8860;MQ=56.61;MQ0=117;MQRankSum=-2.930;QD=9.59;ReadPosRankSum=0.773;VQSLOD=-0.6357;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,3:11:12.04:160,12,0	1/1:6,1:3:2.60:10,3,0	0/0:32,0:18:44.69:0,45,561	0/0:31,0:21:54.16:0,54,668	0/0:19,0:18:24.46:0,24,285	./.	1/1:23,1:16:32.13:399,32,0	1/1:17,1:11:20.25:272,20,0	0/0:5,11:10:0:0,0,0	0/0:16,0:14:39.04:0,39,476	0/0:20,0:20:33.93:0,34,408	1/1:17,2:11:9.03:118,9,0	1/1:11,1:9:18.06:234,18,0	1/1:7,1:6:6.02:80,6,0	1/1:23,2:18:17.27:208,17,0	1/1:13,2:9:11.52:117,12,0	0/0:18,0:15:32.10:0,32,329	0/0:13,0:13:31.65:0,32,386	1/1:21,3:12:27.02:338,27,0	1/1:10,3:6:14.26:167,14,0	1/1:20,4:11:14.99:150,15,0	1/1:20,3:12:14.32:170,14,0	1/1:21,2:16:34.65:370,35,0	1/1:12,0:4:9.03:120,9,0	0/0:21,0:21:29.71:0,30,281	0/0:27,0:24:62.17:0,62,739	1/1:11,1:6:8.68:76,9,0	0/0:10,0:9:24.03:0,24,272
chr10	99474157	.	GTA	G	433.09	PASS	AB=0.968;AC=8;AF=0.143;AN=56;BaseQRankSum=2.955;DP=430;FS=3.549;HRun=0;HaplotypeScore=173.7199;InbreedingCoeff=0.3447;MQ=60.28;MQ0=14;MQRankSum=-0.023;QD=4.98;ReadPosRankSum=0.725;VQSLOD=3.1635;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:9:2.07:0,2,9	0/0:8,0:8:7.41:0,7,31	0/0:33,0:24:55.31:0,55,608	0/0:44,0:25:54.24:0,54,696	0/0:18,0:18:21.09:0,21,145	0/0:11,0:11:4.56:0,5,23	0/0:12,0:11:2.95:0,3,23	0/0:24,0:23:39.98:0,40,364	0/0:9,0:8:5.89:0,6,37	0/0:21,0:21:55.79:0,56,444	0/0:17,0:17:26.10:0,26,204	0/0:14,0:14:3.62:0,4,30	0/1:7,0:7:0:1,0,0	0/1:12,0:11:0:1,0,0	0/0:19,0:18:1.42:0,1,15	0/0:19,0:18:5.18:0,5,57	0/0:15,0:15:41.68:0,42,424	0/0:9,0:9:14.25:0,14,147	0/0:4,0:4:2.84:0,3,14	0/1:10,0:10:0.91:2,0,1	0/1:8,0:6:0.04:0,0,2	0/0:12,0:12:4.14:0,4,25	0/1:14,0:14:0.27:5,0,0	0/0:3,0:3:0.81:0,1,2	0/0:31,0:31:58.74:0,59,439	0/1:19,6:24:44.95:348,0,45	0/0:10,0:9:6.65:0,7,43	1/1:11,0:10:28.96:183,29,0
chr10	99474162	.	TTG	T	3477.92	PASS	AB=0.986;AC=33;AF=0.611;AN=54;BaseQRankSum=11.246;DP=409;FS=3.810;HRun=0;HaplotypeScore=169.2844;InbreedingCoeff=0.6364;MQ=64.48;MQ0=7;MQRankSum=-9.504;QD=17.13;ReadPosRankSum=-8.727;VQSLOD=1.3845;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:14.95:127,15,0	1/1:10,0:10:16.23:226,16,0	0/0:37,0:28:81.28:0,81,1525	0/0:45,0:26:78.06:0,78,1446	0/0:14,0:14:30.09:0,30,503	1/1:8,0:8:0.25:89,0,0	1/1:10,0:10:1.83:120,2,0	0/0:23,0:23:58.25:0,58,348	0/1:8,0:7:17.28:46,0,17	0/0:22,0:22:59.76:0,60,1130	0/0:15,0:15:42.14:0,42,708	1/1:14,0:14:18.16:264,18,0	1/1:7,0:7:14.98:131,15,0	1/1:11,0:11:17.97:163,18,0	1/1:19,0:18:21.81:192,22,0	1/1:18,0:18:1.55:289,2,0	0/0:16,0:16:42.14:0,42,792	0/0:4,0:4:12.04:0,12,232	./.	1/1:10,0:10:26.99:259,27,0	1/1:7,0:6:10.15:104,10,0	1/1:12,0:12:12.63:244,13,0	1/1:14,0:14:38.43:335,38,0	1/1:3,0:3:5.96:44,6,0	0/0:26,0:26:69.23:0,69,1237	0/1:21,1:22:99:409,0,132	0/1:12,0:11:16.53:107,0,17	1/1:5,4:9:27.05:328,27,0
chr10	99474164	.	G	GT	6554.30	PASS	AB=0.564;AC=37;AF=0.685;AN=54;BaseQRankSum=11.950;DP=417;FS=0.860;HRun=2;HaplotypeScore=163.2517;InbreedingCoeff=0.8794;MQ=64.77;MQ0=7;MQRankSum=-11.849;QD=28.25;ReadPosRankSum=-6.719;VQSLOD=2.2813;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:10:15.03:192,15,0	1/1:0,10:10:30.09:391,30,0	0/0:38,0:29:84.09:0,84,1072	0/0:46,0:27:81.08:0,81,1002	0/0:13,0:13:30.10:0,30,382	1/1:3,6:9:15.05:191,15,0	1/1:1,7:8:21:259,21,0	1/1:7,14:21:51.14:726,51,0	1/1:2,7:8:12.03:166,12,0	0/0:22,0:23:66.20:0,66,829	0/0:16,0:16:45.13:0,45,549	1/1:2,14:16:33.11:434,33,0	1/1:1,7:8:15.05:213,15,0	1/1:1,11:12:18.02:223,18,0	1/1:2,16:17:24.08:319,24,0	1/1:1,17:18:39.12:512,39,0	0/0:14,0:14:39.13:0,39,506	0/0:4,0:4:12.04:0,12,156	./.	1/1:0,10:10:27.09:362,27,0	1/1:4,5:8:12.01:146,12,0	1/1:2,11:13:36.11:472,36,0	1/1:0,13:13:38.94:443,39,0	1/1:1,3:4:9.03:114,9,0	0/0:26,0:26:69.22:0,69,889	0/1:5,17:22:53.57:736,0,54	1/1:3,10:12:24.08:316,24,0	1/1:4,5:9:27.08:339,27,0
chr10	99474186	.	GAGAC	G	7439.25	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=14.455;DP=427;FS=17.314;HRun=0;HaplotypeScore=177.6570;InbreedingCoeff=0.9302;MQ=83.21;MQ0=0;MQRankSum=-13.987;QD=36.29;ReadPosRankSum=3.554;VQSLOD=3.9839;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,9:11:8.98:166,9,0	1/1:1,7:8:21.07:402,21,0	0/0:40,0:40:99:0,108,2729	0/0:33,0:32:83.45:0,83,2196	0/0:14,0:14:33.11:0,33,904	1/1:1,8:9:21.07:403,21,0	1/1:0,7:7:17.85:296,18,0	1/1:5,9:14:24.08:465,24,0	1/1:2,7:8:13.41:248,13,0	0/0:30,0:30:90.31:0,90,2408	0/0:18,0:18:45.15:0,45,1218	1/1:2,13:15:32.70:639,33,0	1/1:0,11:11:20.93:405,21,0	1/1:2,11:13:27.09:523,27,0	1/1:2,15:17:24.08:461,24,0	1/1:1,21:22:39.12:753,39,0	0/0:20,0:19:54.19:0,54,1444	0/0:3,0:3:9.03:0,9,224	1/1:0,10:10:15.05:288,15,0	1/1:0,11:11:29.73:580,30,0	1/1:3,2:5:5.48:77,5,0	1/1:4,10:14:30.99:579,31,0	1/1:1,11:12:26.82:517,27,0	1/1:2,2:4:3.01:58,3,0	0/0:31,0:31:84.29:0,84,2240	0/0:25,0:25:75.25:0,75,1999	1/1:0,13:13:30.10:581,30,0	0/0:8,0:8:24.08:0,24,589
chr10	99474656	.	C	CA	2672.52	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-2.057;DP=677;FS=8.663;HRun=4;HaplotypeScore=164.4471;InbreedingCoeff=0.9980;MQ=61.27;MQ0=2;MQRankSum=-1.974;QD=29.05;ReadPosRankSum=1.686;VQSLOD=1.6390;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:54.14:0,54,602	0/0:9,0:9:20.83:0,21,179	0/0:33,0:31:81.09:0,81,879	0/0:26,0:21:55:0,55,593	1/1:8,16:24:57.11:729,57,0	0/0:27,0:27:70.91:0,71,767	0/0:23,0:23:52.70:0,53,499	0/0:35,0:35:96.27:0,96,1089	0/0:27,0:27:66:0,66,713	1/1:4,16:20:48.16:644,48,0	1/1:3,19:22:60.13:708,60,0	0/0:19,0:19:42.02:0,42,448	0/0:42,0:42:99:0,106,1056	0/0:21,0:20:51.06:0,51,556	0/0:27,0:27:62.40:0,62,627	0/0:28,0:28:74.94:0,75,767	0/0:28,0:28:60.17:0,60,676	0/0:12,0:12:30.09:0,30,340	0/0:22,0:22:57.15:0,57,638	0/0:23,0:23:44.58:0,45,465	0/0:20,0:20:48:0,48,521	0/0:21,0:21:50.92:0,51,548	0/0:27,0:27:56.43:0,56,571	0/0:27,0:27:50.23:0,50,521	1/1:4,22:26:59.95:752,60,0	0/0:21,1:22:24.64:0,25,608	0/0:26,0:26:63.16:0,63,630	0/0:14,0:14:30.09:0,30,340
chr10	99474662	.	AAACAACAACAAC	A	15090.07	PASS	AB=0.643;AC=48;AF=0.857;AN=56;BaseQRankSum=4.152;DP=675;FS=2.273;HRun=0;HaplotypeScore=259.1075;InbreedingCoeff=0.4579;MQ=57.37;MQ0=2;MQRankSum=-1.953;QD=24.86;ReadPosRankSum=1.541;VQSLOD=4.0471;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:27:6.46:223,6,0	1/1:1,8:10:24.08:782,24,0	0/0:29,0:27:6.91:0,7,96	0/0:25,0:19:0:0,0,0	1/1:20,0:20:11.78:218,12,0	1/1:16,0:28:27.09:739,27,0	1/1:13,0:21:15.05:417,15,0	1/1:29,4:33:12.01:154,12,0	1/1:17,10:27:12.04:413,12,0	1/1:19,0:19:24.08:618,24,0	1/1:22,0:22:27.09:646,27,0	1/1:11,6:17:11.01:377,11,0	1/1:14,27:41:68.64:2373,69,0	1/1:9,12:20:30.10:1021,30,0	1/1:10,20:30:33.11:1123,33,0	0/1:15,14:29:81.33:900,0,81	1/1:17,0:29:9.03:251,9,0	0/0:13,0:13:15.94:0,16,714	1/1:19,5:24:9.42:273,9,0	1/1:13,11:24:27.09:712,27,0	1/1:16,3:19:3.01:103,3,0	1/1:7,15:22:12.15:448,12,0	1/1:13,16:29:26.93:882,27,0	1/1:14,13:27:15.05:500,15,0	1/1:24,0:24:22.53:519,23,0	0/1:8,0:22:92.53:274,0,93	1/1:11,17:28:30.10:1027,30,0	1/1:7,0:14:11.97:95,12,0
chr10	99474695	.	CAACAACAACAACAT	C	6915.88	PASS	AB=0.964;AC=22;AF=0.393;AN=56;BaseQRankSum=16.367;DP=677;FS=2.986;HRun=0;HaplotypeScore=305.7124;InbreedingCoeff=-0.6655;MQ=58.61;MQ0=5;MQRankSum=-12.879;QD=13.43;ReadPosRankSum=15.733;VQSLOD=0.4219;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:99:140,0,738	0/1:12,0:12:99:308,0,195	0/0:45,0:25:71.05:0,71,1508	0/0:42,0:24:67.57:0,68,1378	0/1:24,3:27:99:190,0,381	0/1:16,0:16:99:570,0,190	0/1:15,0:15:99:311,0,368	0/0:28,0:28:72.15:0,72,1147	0/1:20,0:20:99:135,0,426	0/1:13,4:17:99:683,0,149	0/1:10,7:17:99:674,0,120	0/1:15,0:15:99:100,0,434	0/1:36,0:36:99:895,0,262	0/1:25,0:24:99:352,0,590	0/1:37,0:37:99:386,0,696	0/1:22,0:22:99:333,0,413	0/1:24,0:25:99:172,0,516	0/0:13,0:13:32.47:0,32,1342	0/1:21,0:21:28.18:28,0,758	0/1:27,0:27:99:152,0,802	0/0:23,0:23:2.21:0,2,715	0/1:22,0:22:99:113,0,561	0/1:27,0:27:99:280,0,512	0/1:25,0:25:99:164,0,302	0/1:21,4:25:99:555,0,208	0/1:24,1:25:26.97:27,0,929	0/1:33,0:33:99:349,0,758	0/0:11,0:11:23.81:0,24,303
chr10	99474844	.	G	GC	2718.16	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.488;DP=665;FS=2.614;HRun=6;HaplotypeScore=117.4683;InbreedingCoeff=0.9274;MQ=88.55;MQ0=0;MQRankSum=-1.801;QD=28.61;ReadPosRankSum=0.951;VQSLOD=2.8980;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,102,1033	0/0:11,0:11:33.04:0,33,326	0/0:27,0:27:64.28:0,64,605	0/0:28,0:28:68.79:0,69,640	1/1:1,24:25:69.22:857,69,0	0/0:19,0:19:54.11:0,54,544	0/0:31,0:31:90.20:0,90,918	0/0:41,0:41:93.18:0,93,943	0/0:18,0:18:54.12:0,54,551	1/1:4,19:24:60.17:728,60,0	1/1:2,21:23:53.92:667,54,0	0/0:23,0:23:63.12:0,63,635	0/0:29,0:29:75.16:0,75,763	0/0:19,0:19:54.11:0,54,544	0/0:27,0:27:78.17:0,78,795	0/0:22,0:22:60.14:0,60,612	0/0:19,0:19:51.10:0,51,514	0/0:12,0:12:27.06:0,27,275	0/0:21,0:21:51.11:0,51,520	0/0:28,0:28:75.17:0,75,765	0/0:20,0:20:48.10:0,48,490	0/0:21,0:21:60.12:0,60,605	0/0:33,0:33:87.19:0,87,887	0/0:19,0:19:51.12:0,51,520	1/1:3,20:23:51.16:625,51,0	0/0:25,2:27:0.65:0,1,629	0/0:28,0:28:81.17:0,81,819	0/0:8,0:8:12.01:0,12,122
chr10	99475668	.	G	GT	1477.21	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.348;DP=601;FS=1.094;HRun=9;HaplotypeScore=67.8526;InbreedingCoeff=0.9705;MQ=67.70;MQ0=1;MQRankSum=-3.733;QD=23.08;ReadPosRankSum=0.417;VQSLOD=4.4341;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:15.29:0,15,265	0/0:8,0:8:24:0,24,208	0/0:22,0:21:21.12:0,21,259	0/0:14,0:13:20.97:0,21,178	0/0:21,0:21:47.97:0,48,417	0/0:36,0:36:95.98:0,96,833	0/0:18,0:18:47.96:0,48,412	0/0:36,0:36:80.93:0,81,696	0/0:26,0:26:68.94:0,69,594	0/0:23,0:23:62.97:0,63,547	0/0:20,0:20:14.81:0,15,357	0/0:11,0:11:32.99:0,33,285	0/0:16,0:16:44.98:0,45,391	0/0:14,0:14:38.99:0,39,339	0/0:27,0:27:65.97:0,66,573	0/0:20,0:20:53.99:0,54,468	1/1:4,23:27:43.13:704,43,0	0/0:12,0:12:10.78:0,11,165	0/0:29,0:29:74.96:0,75,649	0/0:27,0:27:74.96:0,75,647	0/0:16,0:16:35.99:0,36,313	0/0:27,0:27:59.95:0,60,521	0/0:24,0:24:62.97:0,63,546	0/0:22,0:22:53.97:0,54,469	0/0:21,0:21:53.98:0,54,469	1/1:4,17:21:25.04:485,25,0	0/0:29,1:30:47.80:0,48,644	1/1:1,15:16:39.11:431,39,0
chr10	99476200	.	C	CT	16164.51	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=4.923;DP=560;FS=1.224;HRun=0;HaplotypeScore=190.1657;InbreedingCoeff=0.9633;MQ=86.28;MQ0=0;MQRankSum=-9.623;QD=37.59;ReadPosRankSum=4.278;VQSLOD=4.0611;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:51.12:681,51,0	1/1:0,7:7:21.07:290,21,0	0/0:25,0:25:69.09:0,69,828	0/0:25,0:25:46.27:0,46,827	0/0:15,0:15:8.73:0,9,125	1/1:0,25:25:75.25:1035,75,0	1/1:0,14:14:39.13:532,39,0	1/1:2,32:34:95.80:1299,96,0	1/1:0,26:26:78.26:1080,78,0	0/0:15,0:15:39.74:0,40,192	0/0:17,0:17:47.53:0,48,233	1/1:0,27:27:75.18:1014,75,0	1/1:0,25:25:75.25:1025,75,0	1/1:2,23:25:60.11:830,60,0	1/1:0,29:29:81.27:1112,81,0	1/1:0,37:37:99:1533,111,0	1/1:0,16:16:39.13:540,39,0	0/0:11,0:11:33.11:0,33,461	1/1:0,15:15:45.13:593,45,0	1/1:0,18:18:51.17:699,51,0	1/1:1,21:22:57.14:790,57,0	1/1:0,4:4:12.04:166,12,0	1/1:0,10:10:27.09:373,27,0	1/1:0,21:21:50.59:670,51,0	0/0:22,0:22:54.53:0,55,250	1/1:2,23:25:52.92:915,53,0	1/1:0,24:24:66.22:904,66,0	1/1:0,2:2:6.02:83,6,0
chr10	99477326	.	T	TA	3113.21	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-11.230;DP=603;FS=5.580;HRun=4;HaplotypeScore=53.8862;InbreedingCoeff=0.9437;MQ=83.20;MQ0=0;MQRankSum=-1.086;QD=35.38;ReadPosRankSum=1.347;VQSLOD=4.1917;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:28.41:0,28,313	0/0:8,0:8:24.07:0,24,272	0/0:27,0:27:72.14:0,72,769	0/0:8,0:8:18.05:0,18,200	1/1:3,15:18:42.14:575,42,0	0/0:33,0:33:87.25:0,87,987	0/0:14,0:14:39.11:0,39,442	0/0:29,0:29:75.21:0,75,844	0/0:24,0:24:72.21:0,72,817	1/1:2,31:33:96.31:1296,96,0	1/1:0,15:15:45.15:616,45,0	0/0:17,0:17:51.15:0,51,579	0/0:16,0:16:48.14:0,48,545	0/0:19,0:19:57.16:0,57,647	0/0:26,0:26:72.19:0,72,807	0/0:28,0:28:84.24:0,84,953	0/0:24,0:24:72.19:0,72,807	0/0:21,0:21:57.16:0,57,646	0/0:23,0:23:60.15:0,60,664	0/0:30,0:30:87.25:0,87,986	0/0:22,0:22:60.13:0,60,658	0/0:25,0:25:72.19:0,72,807	0/0:19,0:19:48.13:0,48,545	0/0:17,0:17:42.12:0,42,476	1/1:1,21:22:29.17:787,29,0	0/0:26,2:28:2.14:0,2,802	0/0:33,0:33:96.23:0,96,1075	0/0:12,0:12:36.10:0,36,408
chr10	99477810	.	G	GTAATGCCTACA	25455.56	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-5.333;DP=713;FS=0.681;HRun=0;HaplotypeScore=218.4460;InbreedingCoeff=0.9800;MQ=82.50;MQ0=2;MQRankSum=-18.351;QD=120.07;ReadPosRankSum=1.089;VQSLOD=5.1616;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.15:0,45,1560	0/0:9,0:9:27.08:0,27,844	0/0:23,0:23:57.19:0,57,1669	0/0:28,0:28:69.21:0,69,2092	1/1:22,23:48:96.33:5062,96,0	0/0:34,0:34:99:0,99,3223	0/0:13,0:13:30.09:0,30,941	0/0:35,0:35:99:0,102,3225	0/0:21,0:21:63.20:0,63,2108	1/1:14,25:39:99:5689,105,0	1/1:12,18:32:72.25:3866,72,0	0/0:15,0:15:42.11:0,42,1224	0/0:23,0:23:66.23:0,66,2289	0/0:25,0:25:72.25:0,72,2392	0/0:20,0:20:57.20:0,57,1957	0/0:33,0:32:90.31:0,90,3089	1/1:7,2:9:6.02:339,6,0	0/0:11,0:11:30.10:0,30,1021	0/0:17,0:17:42.14:0,42,1392	0/0:42,0:42:99:0,123,4047	0/0:14,0:14:39.13:0,39,1319	0/0:33,0:33:96.33:0,96,3213	0/0:26,0:26:75.26:0,75,2456	0/0:16,0:16:42.11:0,42,1183	1/1:17,24:44:99:5399,102,0	1/1:13,13:27:75.24:3800,75,0	0/0:47,0:47:99:0,129,4253	1/1:2,7:11:24.08:1300,24,0
chr10	99478473	.	GAGAGAA	G	1084.92	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=-0.558;DP=538;FS=5.418;HRun=0;HaplotypeScore=123.4907;InbreedingCoeff=0.2000;MQ=50.68;MQ0=23;MQRankSum=1.815;QD=9.04;ReadPosRankSum=-0.770;VQSLOD=2.2176;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:12.08:0,12,503	0/0:7,0:7:17.19:0,17,238	0/0:42,0:12:24.49:0,24,247	0/0:70,0:19:13.59:0,14,216	0/1:16,0:16:57.15:101,0,57	0/0:20,0:20:17.45:0,17,500	0/1:20,0:19:37.49:37,0,281	0/0:45,0:44:20.05:0,20,1157	0/0:12,0:11:17.98:0,18,215	0/1:15,0:14:11.82:12,0,379	0/1:12,0:11:42.49:163,0,42	0/0:11,0:11:17.96:0,18,204	0/0:19,0:19:53.62:0,54,967	0/0:9,0:9:15.01:0,15,308	0/0:22,0:22:35.11:0,35,747	0/0:18,0:17:36.03:0,36,722	0/1:15,0:15:35.72:93,0,36	0/0:18,0:17:41.08:0,41,1132	0/0:16,0:16:3.29:0,3,538	0/0:12,0:12:29.67:0,30,377	0/0:9,0:7:12.41:0,12,92	0/0:14,0:14:21.46:0,21,203	0/0:10,0:10:20.07:0,20,367	0/0:16,0:16:20.99:0,21,200	0/1:19,0:18:91.43:91,0,152	1/1:1,12:13:39.03:600,39,0	0/0:23,0:23:48.09:0,48,1031	1/1:4,6:6:6.02:137,6,0
chr10	99478479	.	A	AAGAGAGAG	7798.42	PASS	AB=0.984;AC=47;AF=0.839;AN=56;BaseQRankSum=-3.299;DP=558;FS=4.891;HRun=0;HaplotypeScore=121.2512;InbreedingCoeff=0.4253;MQ=51.84;MQ0=30;MQRankSum=-1.603;QD=16.15;ReadPosRankSum=-0.635;VQSLOD=3.8211;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:21:12.82:110,13,0	1/1:4,3:8:6.02:188,6,0	0/0:48,0:10:8.31:0,8,84	0/1:74,0:14:1.90:2,0,20	1/1:12,0:14:10.95:154,11,0	1/1:11,0:22:8.96:227,9,0	0/1:19,0:19:6.19:174,0,6	1/1:45,0:42:56.88:600,57,0	1/1:7,4:11:3.01:124,3,0	1/1:13,0:15:27.13:424,27,0	1/1:14,0:13:5.58:42,6,0	1/1:3,2:8:3.01:124,3,0	1/1:15,5:20:25.46:810,25,0	1/1:3,4:7:6.02:248,6,0	1/1:9,10:24:24.07:800,24,0	1/1:7,9:16:18.06:744,18,0	1/1:16,0:15:5.48:57,5,0	0/0:17,0:16:19.38:0,19,778	1/1:10,6:18:24.41:345,24,0	1/1:5,8:15:12.04:408,12,0	1/1:11,0:9:9:85,9,0	1/1:12,0:12:14.99:151,15,0	1/1:10,1:13:9.50:338,10,0	1/1:7,10:18:3.01:124,3,0	1/1:17,0:16:16.74:181,17,0	0/1:14,0:14:99:101,0,180	1/1:8,15:25:30.10:1236,30,0	0/0:10,0:6:6.02:0,6,108
chr10	99479324	.	T	TA	1387.95	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.723;DP=799;FS=6.609;HRun=1;HaplotypeScore=81.2872;InbreedingCoeff=0.9453;MQ=84.74;MQ0=1;MQRankSum=-0.173;QD=40.82;ReadPosRankSum=2.523;VQSLOD=4.2340;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,156,1993	0/0:16,0:16:45.15:0,45,584	0/0:25,0:25:72.17:0,72,884	0/0:25,0:25:62.78:0,63,697	0/0:24,0:24:69.22:0,69,882	0/0:26,0:26:75.23:0,75,959	0/0:41,0:41:99:0,117,1504	0/0:29,0:29:75.23:0,75,950	0/0:29,0:29:87.23:0,87,1096	0/0:27,0:27:78.25:0,78,1006	0/0:22,0:22:57.18:0,57,738	0/0:37,0:37:99:0,108,1355	0/0:33,0:33:96.30:0,96,1232	0/0:39,0:39:99:0,114,1479	0/0:43,0:42:99:0,120,1557	0/0:35,0:35:93.27:0,93,1177	1/1:0,34:34:99:1483,99,0	0/0:24,0:24:72.16:0,72,886	0/0:15,0:15:45.14:0,45,571	0/0:19,0:19:51.17:0,51,662	0/0:47,0:47:99:0,141,1828	0/0:23,0:23:66.20:0,66,841	0/0:23,0:23:63.19:0,63,803	0/0:34,0:34:99:0,102,1277	0/0:21,0:21:57.16:0,57,723	0/0:27,0:27:78.25:0,78,1002	0/0:26,0:26:78.24:0,78,997	0/0:3,0:3:9.03:0,9,117
chr10	99479472	.	G	GCTCTCCTTT	4349	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.696;DP=565;FS=2.310;HRun=0;HaplotypeScore=160.1298;InbreedingCoeff=0.9882;MQ=59.75;MQ0=2;MQRankSum=-8.521;QD=114.45;ReadPosRankSum=2.221;VQSLOD=5.7501;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,4076	0/0:9,0:9:27.09:0,27,759	0/0:17,0:14:36.55:0,37,932	0/0:31,0:25:43.74:0,44,1904	1/1:2,8:10:27.05:1026,27,0	0/0:18,0:17:51.12:0,51,1467	0/0:32,0:32:93.23:0,93,2684	0/0:31,0:31:87.26:0,87,2511	0/0:26,0:26:75.23:0,75,2230	1/1:1,8:9:27.09:1106,27,0	1/1:0,7:7:21.07:850,21,0	0/0:28,0:28:81.27:0,81,2488	0/0:33,0:33:96.30:0,96,2980	0/0:24,0:24:72.20:0,72,2216	0/0:27,0:27:81.22:0,81,2469	0/0:31,0:31:90.30:0,90,2838	1/1:1,4:5:12.04:526,12,0	0/0:17,0:18:48.01:0,48,1304	0/0:11,0:11:33.11:0,33,990	0/0:16,0:16:48.14:0,48,1487	0/0:29,0:29:87.28:0,87,2725	0/0:23,0:23:63.22:0,63,2004	0/0:16,0:16:48.16:0,48,1560	0/0:21,0:21:60.21:0,60,1957	1/1:0,6:7:21.07:841,21,0	0/0:15,0:15:42.14:0,42,1367	0/0:21,0:20:63.20:0,63,1816	0/0:6,0:6:18.06:0,18,587
chr10	99479473	.	GAGA	G	775.91	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.027;DP=559;FS=2.430;HRun=0;HaplotypeScore=100.9526;InbreedingCoeff=0.9875;MQ=59.78;MQ0=1;MQRankSum=-8.872;QD=20.97;ReadPosRankSum=2.492;VQSLOD=3.7985;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,2977	0/0:9,0:9:27.08:0,27,585	0/0:16,0:13:36.11:0,36,699	0/0:32,0:26:51.39:0,51,1554	1/1:1,8:10:23.13:208,23,0	0/0:16,0:16:45.15:0,45,1105	0/0:32,0:32:93.30:0,93,2140	0/0:29,0:29:87.30:0,87,2101	0/0:28,0:28:81.15:0,81,1625	1/1:1,8:9:24.05:261,24,0	1/1:0,7:7:20.99:179,21,0	0/0:28,0:28:84.27:0,84,1948	0/0:32,0:32:96.32:0,96,2219	0/0:25,0:25:69.21:0,69,1598	0/0:27,0:27:78.27:0,78,1867	0/0:30,0:30:87.30:0,87,2068	1/1:0,4:4:12.02:121,12,0	0/0:17,0:17:51.06:0,51,1005	0/0:11,0:11:33.11:0,33,779	0/0:15,0:15:45.15:0,45,1105	0/0:29,0:29:87.28:0,87,2087	0/0:23,0:23:63.22:0,63,1512	0/0:17,0:17:51.14:0,51,1132	0/0:21,0:21:60.21:0,60,1444	1/1:1,6:7:20.93:179,21,0	0/0:15,0:15:45.15:0,45,1090	0/0:21,0:20:63.22:0,63,1536	0/0:6,0:6:18.06:0,18,443
chr10	99479623	.	AGGCAACTGTGGGGCGGAGCATACCT	A	3520.23	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-0.560;DP=493;FS=5.496;HRun=0;HaplotypeScore=346.4074;InbreedingCoeff=0.8270;MQ=46.06;MQ0=4;MQRankSum=-3.056;QD=31.43;ReadPosRankSum=-0.384;VQSLOD=1.4095;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:43.40:43,0,1835	0/0:5,0:5:12.04:0,12,631	0/0:13,0:7:12.04:0,12,624	0/0:13,0:11:30.10:0,30,2001	1/1:5,12:17:5.95:216,6,0	0/0:15,0:14:29.15:0,29,1525	0/0:17,0:17:27.09:0,27,1008	0/0:30,0:26:51.17:0,51,1744	0/0:22,0:22:54.16:0,54,3524	1/1:5,14:19:33.03:1103,33,0	1/1:2,11:13:9.03:593,9,0	0/0:22,0:22:45.15:0,45,2727	0/0:17,0:17:33.11:0,33,2328	0/0:21,0:21:51.17:0,51,3479	0/0:14,0:14:30.10:0,30,2294	0/0:26,0:26:69.22:0,69,4622	1/1:11,0:11:26.98:574,27,0	0/0:14,0:14:42.10:0,42,2923	0/0:18,0:12:18.06:0,18,988	0/0:18,0:18:18.04:0,18,884	0/0:23,0:23:39.13:0,39,1315	0/0:13,0:13:27.09:0,27,1139	0/0:13,0:13:24.07:0,24,803	0/0:22,0:22:33.52:0,34,1529	1/1:3,20:23:15.05:991,15,0	0/0:13,0:13:33.11:0,33,3255	0/0:19,0:19:39.13:0,39,2602	0/0:12,0:12:27.09:0,27,2698
chr10	99479648	.	T	TGTCTGTTGCCA	42342.36	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=-2.795;DP=539;FS=1.058;HRun=0;HaplotypeScore=176.6879;InbreedingCoeff=0.6039;MQ=41.94;MQ0=2;MQRankSum=-6.685;QD=93.06;ReadPosRankSum=-1.993;VQSLOD=4.5573;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:69.23:2832,69,0	1/1:9,0:9:24.08:1246,24,0	0/0:23,0:10:11.54:0,12,747	0/0:25,0:15:30.02:0,30,1246	1/1:12,0:12:3.07:11,3,0	1/1:14,0:13:42.13:1726,42,0	1/1:20,0:18:48.12:1920,48,0	1/1:29,0:20:51.11:2023,51,0	1/1:24,0:24:69.15:3412,69,0	0/1:14,0:14:56.26:56,0,194	0/1:11,0:11:67.08:143,0,67	1/1:19,0:19:54.18:2834,54,0	1/1:24,0:24:66.21:3018,66,0	1/1:30,0:30:90.26:3838,90,0	1/1:25,0:25:75.21:3467,75,0	1/1:26,0:26:75.26:4097,75,0	0/1:9,0:9:99:207,0,128	0/0:13,0:13:36.10:0,36,1159	1/1:13,0:11:27.05:1216,27,0	1/1:22,0:21:41.55:1158,42,0	1/1:21,0:20:48.10:1191,48,0	1/1:18,0:18:51.17:2018,51,0	1/1:20,0:20:42.12:1292,42,0	1/1:23,0:23:48.16:2177,48,0	0/1:21,0:21:8.01:8,0,156	0/0:13,0:13:39.13:0,39,1260	1/1:14,1:20:45.15:2451,45,0	0/0:9,0:9:24.07:0,24,787
chr10	99479649	.	G	GTCTGTT	16500.56	PASS	AB=0.673;AC=23;AF=0.411;AN=56;BaseQRankSum=5.841;DP=472;FS=2.273;HRun=0;HaplotypeScore=179.6589;InbreedingCoeff=-0.1270;MQ=43.71;MQ0=2;MQRankSum=-9.253;QD=49.85;ReadPosRankSum=8.322;VQSLOD=4.0276;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,8:16:99:769,0,126	1/1:3,4:7:21.07:593,21,0	0/0:24,0:10:27.94:0,28,589	0/0:25,0:15:45.15:0,45,1008	0/0:12,0:12:6.02:0,6,110	0/1:4,7:10:99:603,0,129	0/1:8,7:13:99:494,0,154	0/1:12,8:15:58.56:726,0,59	1/1:7,15:22:22.56:1599,23,0	0/0:14,0:14:27.04:0,27,413	0/1:11,0:11:12.90:13,0,66	0/1:4,14:18:16.08:1223,0,16	0/1:11,12:23:99:1202,0,141	0/1:13,16:29:99:1619,0,182	0/1:7,16:23:89.91:1563,0,90	1/1:5,17:22:59.87:1728,60,0	0/0:9,0:9:4.39:0,4,192	0/0:13,0:13:36.10:0,36,839	1/1:6,3:8:21.03:487,21,0	0/1:10,9:18:99:226,0,267	0/1:10,5:14:99:402,0,155	0/1:9,9:18:99:863,0,144	0/1:7,7:14:99:438,0,192	0/1:7,14:21:70.75:902,0,71	0/0:22,0:22:14.98:0,15,187	0/0:13,0:13:39.13:0,39,970	0/1:6,12:18:10.78:1051,0,11	0/0:8,0:8:24.07:0,24,563
chr10	99479651	.	C	CCAGGT	17529.91	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=4.735;DP=482;FS=0.000;HRun=0;HaplotypeScore=170.8645;InbreedingCoeff=0.9364;MQ=44.03;MQ0=3;MQRankSum=-8.240;QD=52.02;ReadPosRankSum=1.774;VQSLOD=5.0890;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,8:16:41.98:832,42,0	1/1:3,4:7:17.28:454,17,0	0/0:24,0:10:27.08:0,27,580	0/0:26,0:16:39.14:0,39,849	0/0:13,0:13:9.02:0,9,98	1/1:5,7:11:33.11:697,33,0	1/1:8,7:13:33.11:690,33,0	1/1:14,8:17:38.88:919,39,0	1/1:6,15:21:63.20:1507,63,0	0/0:16,0:16:16.98:0,17,202	0/1:12,0:12:1.04:1,0,78	1/1:4,14:18:48.16:1184,48,0	1/1:13,12:25:66.17:1364,66,0	1/1:12,16:28:67.44:1754,67,0	1/1:8,16:24:65.64:1537,66,0	1/1:6,17:23:63.20:1552,63,0	0/0:9,0:9:16.67:0,17,147	0/0:13,0:13:36.09:0,36,737	1/1:6,3:8:24.06:558,24,0	1/1:11,7:19:38.77:639,39,0	1/1:6,5:10:13.07:444,13,0	1/1:11,9:20:24.91:875,25,0	1/1:7,7:14:36.04:666,36,0	1/1:7,14:21:41.24:871,41,0	0/0:23,0:23:20.24:0,20,199	0/0:13,0:13:39.13:0,39,893	1/1:7,12:19:42.13:985,42,0	0/0:7,0:7:21.07:0,21,489
chr10	99480817	.	GC	G	6485.86	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.276;DP=704;FS=0.000;HRun=1;HaplotypeScore=82.3044;InbreedingCoeff=0.9944;MQ=93.37;MQ0=0;MQRankSum=-3.686;QD=38.84;ReadPosRankSum=2.644;VQSLOD=5.4339;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,2074	0/0:15,0:15:45.14:0,45,670	0/0:38,0:38:99:0,101,1514	0/0:30,1:30:52.02:0,52,1199	1/1:0,22:22:60.06:785,60,0	0/0:21,0:21:60.20:0,60,949	0/0:31,0:31:93.30:0,93,1460	0/0:32,0:32:92.08:0,92,1436	0/0:18,0:18:54.17:0,54,839	1/1:0,22:22:63.18:845,63,0	1/1:0,17:17:51.17:713,51,0	0/0:22,0:22:66.20:0,66,1008	0/0:24,0:24:72.16:0,72,1069	0/0:39,0:39:99:0,114,1770	0/0:38,0:38:99:0,114,1821	0/0:26,0:26:78.22:0,78,1176	1/1:0,36:36:99:1443,105,0	0/0:16,0:16:48.16:0,48,764	0/0:24,0:24:72.23:0,72,1107	0/0:19,0:19:57.16:0,57,863	0/0:35,0:35:99:0,102,1598	0/0:23,0:23:63.21:0,63,1001	0/0:6,0:6:12.01:0,12,145	0/0:14,0:14:39.13:0,39,623	1/1:0,30:30:84.28:1171,84,0	1/1:0,22:22:66.21:903,66,0	0/0:20,0:19:60.18:0,60,933	1/1:0,18:18:45.15:625,45,0
chr10	99481300	.	TA	T	747.34	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.557;DP=648;FS=0.695;HRun=8;HaplotypeScore=75.5493;InbreedingCoeff=0.9838;MQ=72.01;MQ0=0;MQRankSum=-2.446;QD=20.76;ReadPosRankSum=0.242;VQSLOD=3.7057;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.24:0,78,942	0/0:10,0:10:30.09:0,30,362	0/0:17,0:17:38.97:0,39,396	0/0:6,0:6:12.04:0,12,145	0/0:42,0:42:99:0,102,461	0/0:29,0:28:78.24:0,78,942	0/0:16,0:16:48.15:0,48,579	0/0:36,0:36:96.28:0,96,1150	0/0:22,0:22:60.17:0,60,712	0/0:32,0:32:79.12:0,79,350	0/0:27,0:27:52.25:0,52,234	0/0:28,0:28:78.20:0,78,918	0/0:18,0:18:51.16:0,51,616	0/0:16,0:16:45.14:0,45,541	0/0:32,0:32:90.22:0,90,1033	0/0:37,0:37:99:0,111,1339	0/0:20,0:19:54.15:0,54,640	0/0:14,0:14:39.10:0,39,459	0/0:15,0:15:33.10:0,33,397	0/0:35,0:35:90.25:0,90,1058	0/0:15,0:15:45.14:0,45,543	0/0:28,0:29:78.09:0,78,907	0/0:22,0:22:57.17:0,57,689	0/0:12,0:12:36.11:0,36,435	0/0:26,0:26:60.38:0,60,270	1/1:3,16:19:48.08:463,48,0	0/0:29,0:29:78.22:0,78,930	1/1:2,15:17:42.07:406,42,0
chr10	99481301	.	A	AC	4856.91	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-12.160;DP=657;FS=0.370;HRun=0;HaplotypeScore=62.2210;InbreedingCoeff=0.9953;MQ=71.88;MQ0=0;MQRankSum=-0.352;QD=36.52;ReadPosRankSum=2.696;VQSLOD=4.5273;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.26:0,78,1086	0/0:11,0:11:30.10:0,30,418	0/0:17,0:17:45.07:0,45,523	0/0:6,0:6:15.02:0,15,189	1/1:1,43:44:99:1664,120,0	0/0:28,0:27:81.26:0,81,1115	0/0:16,0:16:48.16:0,48,669	0/0:36,0:36:99:0,105,1405	0/0:23,0:23:66.19:0,66,872	1/1:0,33:33:95.12:1347,95,0	1/1:1,26:28:65.91:881,66,0	0/0:28,0:28:84.23:0,84,1120	0/0:18,0:18:54.17:0,54,739	0/0:17,0:17:48.14:0,48,652	0/0:31,0:31:93.27:0,93,1218	0/0:37,0:37:99:0,111,1542	0/0:20,0:19:60.17:0,60,784	0/0:14,0:14:39.12:0,39,528	0/0:15,0:15:45.10:0,45,561	0/0:34,0:34:96.28:0,96,1261	0/0:15,0:15:45.15:0,45,628	0/0:30,0:30:75.94:0,76,1066	0/0:23,0:23:60.16:0,60,815	0/0:13,0:13:36.12:0,36,502	1/1:0,28:28:66.22:965,66,0	0/0:20,0:20:52.28:0,52,311	0/0:28,0:28:81.25:0,81,1097	0/0:17,0:17:46.93:0,47,285
chr10	99481647	.	CTT	C	5905.08	PASS	AB=0.585;AC=49;AF=0.875;AN=56;BaseQRankSum=1.925;DP=653;FS=0.000;HRun=14;HaplotypeScore=96.6595;InbreedingCoeff=0.7163;MQ=58.71;MQ0=10;MQRankSum=0.511;QD=10.06;ReadPosRankSum=3.266;VQSLOD=3.6469;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,25:41:15.82:569,16,0	1/1:1,14:15:32.98:305,33,0	0/0:26,0:13:2.91:0,3,35	0/0:16,0:7:8.97:0,9,77	1/1:7,0:22:13.58:59,14,0	1/1:7,10:20:6.71:198,7,0	1/1:3,13:16:27.01:249,27,0	1/1:21,15:37:44.43:394,44,0	1/1:5,11:16:17.97:166,18,0	1/1:7,0:29:36.84:183,37,0	1/1:8,0:29:24.58:115,25,0	0/1:7,17:24:2.73:192,0,3	1/1:4,11:18:26.29:217,26,0	1/1:11,7:20:30.02:229,30,0	1/1:13,17:29:35.31:300,35,0	1/1:7,15:23:38.45:329,38,0	1/1:7,0:18:24.67:106,25,0	0/0:20,1:23:16.23:0,16,482	1/1:10,9:21:32.15:253,32,0	1/1:8,15:26:20.76:331,21,0	1/1:9,7:14:11.72:90,12,0	1/1:9,18:29:53.48:466,53,0	1/1:11,14:26:8.31:236,8,0	1/1:1,22:26:39.06:424,39,0	1/1:5,0:20:30.15:130,30,0	1/1:9,0:28:15.15:127,15,0	1/1:3,10:14:20.43:178,20,0	1/1:5,0:13:13.70:59,14,0
chr10	99482276	.	CGT	C	55.68	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.980;DP=485;FS=9.740;HRun=0;HaplotypeScore=155.8917;InbreedingCoeff=0.8337;MQ=82.14;MQ0=2;MQRankSum=-1.162;QD=2.78;ReadPosRankSum=-0.291;VQSLOD=2.0755;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:42.65:0,43,709	0/0:6,0:6:18.05:0,18,310	0/0:20,0:15:29.85:0,30,463	0/0:24,0:22:27.88:0,28,582	0/0:25,0:25:51.16:0,51,855	0/0:15,0:15:26.66:0,27,462	0/0:32,0:32:36.98:0,37,650	0/0:20,0:20:48.13:0,48,825	0/0:12,0:12:32.78:0,33,575	0/0:22,0:22:63.34:0,63,1046	0/0:16,0:16:39.11:0,39,635	0/0:15,0:15:30.08:0,30,503	0/0:12,0:12:27.09:0,27,517	0/0:14,0:14:32.89:0,33,577	0/0:8,0:8:12.04:0,12,229	0/0:10,0:10:18.05:0,18,313	1/1:14,4:20:6.57:137,7,0	0/0:21,0:19:54.13:0,54,946	0/0:17,0:17:51.17:0,51,945	0/0:13,0:13:17.80:0,18,296	0/0:18,0:18:42.14:0,42,806	0/0:17,0:17:35.33:0,35,545	0/0:18,0:18:26.36:0,26,380	0/0:17,0:17:20.32:0,20,279	0/0:23,0:23:48.15:0,48,812	0/0:24,0:24:69.21:0,69,1090	0/0:12,0:12:26.88:0,27,406	0/0:11,0:11:24.07:0,24,398
chr10	99482280	.	CGCATGT	C	213.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.178;DP=469;FS=4.263;HRun=0;HaplotypeScore=181.9764;InbreedingCoeff=0.8351;MQ=80.02;MQ0=2;MQRankSum=-4.276;QD=11.86;ReadPosRankSum=-1.451;VQSLOD=2.2431;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:7.49:0,7,296	0/0:5,0:5:15.04:0,15,344	0/0:17,0:13:23.70:0,24,347	0/0:23,0:21:32.07:0,32,647	0/0:26,0:26:41.78:0,42,554	0/0:15,0:15:23.20:0,23,292	0/0:32,0:32:20.42:0,20,466	0/0:16,0:16:38.83:0,39,544	0/0:13,0:13:28.81:0,29,350	0/0:24,0:24:50.25:0,50,835	0/0:18,0:18:38.79:0,39,598	0/0:13,0:13:24.50:0,24,400	0/0:13,0:13:30.08:0,30,561	0/0:13,0:13:21.30:0,21,353	0/0:8,0:8:12.03:0,12,136	0/0:9,0:9:15:0,15,297	1/1:14,4:18:20.66:305,21,0	0/0:18,0:17:48.16:0,48,851	0/0:17,0:17:35.41:0,35,727	0/0:13,0:13:17.71:0,18,166	0/0:18,0:18:42.03:0,42,587	0/0:17,0:17:35.66:0,36,464	0/0:17,0:17:27.10:0,27,269	0/0:16,0:16:16.35:0,16,189	0/0:22,0:22:44.94:0,45,834	0/0:22,0:22:27.40:0,27,901	0/0:11,0:11:20.83:0,21,170	0/0:12,0:12:20.99:0,21,249
chr10	99482283	.	ATG	A	2720.71	PASS	AB=0.972;AC=36;AF=0.643;AN=56;BaseQRankSum=-8.691;DP=454;FS=0.000;HRun=0;HaplotypeScore=146.1396;InbreedingCoeff=-0.2075;MQ=77.23;MQ0=2;MQRankSum=3.688;QD=6.54;ReadPosRankSum=-0.877;VQSLOD=3.0214;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:19:1.86:153,0,2	0/1:5,0:5:4.96:15,0,5	0/0:16,0:12:4.17:0,4,82	0/0:21,0:18:28.91:0,29,208	1/1:24,1:25:21.23:287,21,0	0/1:14,0:14:0.03:61,0,0	1/1:31,0:31:6.03:128,6,0	0/1:5,11:16:10.11:167,0,10	1/1:11,0:11:2.94:118,3,0	0/1:24,0:24:0.15:244,0,0	1/1:19,1:20:5.69:106,6,0	0/1:13,0:13:0.43:52,0,0	0/1:13,0:13:50.61:54,0,51	0/1:12,0:12:3:80,0,3	1/1:8,0:8:8.90:60,9,0	0/1:9,0:9:25.30:30,0,25	1/1:12,0:12:6.63:59,7,0	0/1:20,0:19:9.69:116,0,10	0/1:15,0:15:17.11:128,0,17	1/1:14,0:14:5.72:102,6,0	1/1:18,0:18:26.04:227,26,0	0/1:17,0:17:7.58:120,0,8	1/1:18,0:18:2.37:123,2,0	0/1:15,0:15:19.92:35,0,20	0/1:23,1:24:20.08:63,0,20	0/1:21,0:21:6.02:167,0,6	1/1:10,0:10:1.80:76,2,0	0/1:11,0:11:2.72:94,0,3
chr10	99482284	.	TGTGC	T	2506.36	PASS	AB=0.990;AC=28;AF=0.500;AN=56;BaseQRankSum=-9.433;DP=457;FS=7.647;HRun=0;HaplotypeScore=159.3170;InbreedingCoeff=-0.5770;MQ=76.88;MQ0=2;MQRankSum=3.005;QD=6.28;ReadPosRankSum=-4.739;VQSLOD=0.3385;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:22.01:159,0,22	0/1:5,0:5:7.03:7,0,77	0/0:17,0:12:4.17:0,4,82	0/0:21,0:18:28.92:0,29,238	1/1:23,2:25:15.70:366,16,0	0/1:14,0:14:22.16:38,0,22	0/1:31,0:31:72.39:112,0,72	0/1:16,0:16:99:162,0,102	0/1:12,0:12:29.16:113,0,29	0/1:20,2:22:41.56:324,0,42	0/1:18,1:19:2.34:70,0,2	0/1:13,0:13:30.09:30,0,77	0/1:13,0:13:49.86:50,0,187	0/1:13,0:13:77.93:78,0,79	1/1:6,0:7:8.90:60,9,0	0/1:9,0:9:29.88:30,0,102	1/1:16,0:16:1.49:121,1,0	0/0:20,0:19:44.57:0,45,308	0/1:16,0:16:99:111,0,142	0/1:14,0:14:6.11:96,0,6	0/1:18,0:18:23.65:146,0,24	0/1:16,0:17:85.10:94,0,85	0/1:18,0:18:24.06:99,0,24	0/1:15,0:15:33.32:33,0,68	0/1:23,1:24:40.28:75,0,40	0/1:21,0:21:99:124,0,186	0/1:10,0:10:46.52:71,0,47	0/1:11,0:11:54.15:94,0,54
chr10	99482286	.	TGC	T	488.79	PASS	AB=1.000;AC=6;AF=0.115;AN=52;BaseQRankSum=-4.218;DP=466;FS=12.882;HRun=0;HaplotypeScore=160.1582;InbreedingCoeff=0.1672;MQ=74.17;MQ0=2;MQRankSum=2.059;QD=4.94;ReadPosRankSum=2.474;VQSLOD=2.2126;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:17:4.58:5,0,34	0/0:5,0:5:11.90:0,12,85	./.	0/0:19,0:16:2.48:0,2,29	0/1:24,0:24:71.92:72,0,84	0/0:14,0:14:13.58:0,14,46	0/0:31,0:31:11.18:0,11,85	0/0:20,0:20:12.26:0,12,111	0/0:14,0:14:8.84:0,9,42	0/1:23,0:23:24.82:25,0,185	0/0:21,0:21:12.29:0,12,211	0/0:15,0:15:8.99:0,9,77	0/0:14,0:14:17.75:0,18,152	0/0:15,0:15:8.76:0,9,79	./.	0/0:8,0:8:9:0,9,80	0/1:15,0:15:5.37:36,0,5	1/1:2,17:18:39.12:473,39,0	0/0:13,0:13:20.23:0,20,165	0/0:14,0:14:2.74:0,3,12	0/0:18,0:18:5.96:0,6,44	0/0:18,0:18:16.93:0,17,89	0/0:18,0:18:5.54:0,6,24	0/0:17,0:17:8.28:0,8,51	0/0:26,0:26:36.36:0,36,359	0/0:20,0:20:26.93:0,27,196	0/0:11,0:11:8.82:0,9,61	0/0:11,0:11:6:0,6,52
chr10	99482298	.	C	CGTGTGT	973.45	PASS	AB=0.958;AC=17;AF=0.315;AN=54;BaseQRankSum=2.942;DP=466;FS=18.192;HRun=0;HaplotypeScore=172.4654;InbreedingCoeff=0.2266;MQ=61.72;MQ0=3;MQRankSum=-6.437;QD=5.56;ReadPosRankSum=1.184;VQSLOD=1.7977;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,7:16:4.98:258,0,5	0/1:7,0:7:2.01:2,0,236	1/1:17,0:8:2.83:22,3,0	0/0:19,0:13:13.38:0,13,162	0/0:25,0:25:39.06:0,39,589	1/1:2,9:16:14.62:447,15,0	0/0:31,0:31:7.36:0,7,131	0/0:19,0:19:2.56:0,3,233	0/0:10,0:10:6:0,6,82	0/0:22,0:22:48.88:0,49,764	0/0:20,0:20:43.96:0,44,646	0/1:13,0:13:39.75:40,0,103	0/1:14,0:14:11.75:12,0,68	0/0:16,0:16:3.63:0,4,11	./.	1/1:10,0:10:8.43:56,8,0	0/1:17,0:17:28.15:124,0,28	0/0:18,0:17:42.13:0,42,654	0/0:11,0:10:15.48:0,15,307	0/0:13,0:13:3:0,3,25	0/0:16,0:16:15.05:0,15,247	0/0:22,0:22:11.70:0,12,208	0/0:15,0:15:5.81:0,6,74	1/1:21,0:21:1.13:5,1,0	0/0:26,0:26:57.19:0,57,898	0/1:22,0:22:70.45:70,0,509	1/1:10,0:10:5.59:16,6,0	0/1:11,0:11:15.04:78,0,15
chr10	99482300	.	C	CGTGTGT	1579.41	PASS	AB=0.974;AC=24;AF=0.444;AN=54;BaseQRankSum=2.875;DP=464;FS=1.992;HRun=0;HaplotypeScore=166.0745;InbreedingCoeff=0.0234;MQ=59.28;MQ0=3;MQRankSum=-7.383;QD=5.35;ReadPosRankSum=1.043;VQSLOD=2.8343;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:16:0.07:304,0,0	0/1:9,0:9:19.08:19,0,183	1/1:16,0:8:4.15:19,4,0	0/1:20,0:12:3.26:3,0,76	0/0:25,0:25:4.27:0,4,188	1/1:14,0:15:14.62:460,15,0	0/1:30,0:30:39.31:39,0,49	0/1:19,0:19:61.56:62,0,214	0/0:10,0:10:3.01:0,3,38	0/1:21,0:21:5.30:5,0,295	0/0:19,0:19:34.95:0,35,285	0/1:13,0:13:31.21:31,0,62	0/1:14,0:14:34.24:76,0,34	1/1:16,0:16:8.96:49,9,0	./.	1/1:11,0:11:9:84,9,0	0/1:10,7:18:9.90:281,0,10	0/0:17,0:16:39.13:0,39,630	0/1:12,0:11:51.17:51,0,222	0/0:12,0:12:0:0,0,0	0/0:16,0:16:14.96:0,15,149	0/0:20,0:20:8.69:0,9,109	0/0:16,0:16:2.79:0,3,24	1/1:21,0:21:6.35:37,6,0	0/0:26,0:26:54.18:0,54,435	0/1:21,0:21:77.37:77,0,399	0/1:12,0:12:10.67:53,0,11	1/1:10,0:10:5.98:89,6,0
chr10	99482304	.	C	CGCGTGTGT	6171.48	PASS	AB=0.829;AC=35;AF=0.673;AN=52;BaseQRankSum=-6.889;DP=513;FS=13.573;HRun=0;HaplotypeScore=171.6390;InbreedingCoeff=0.0206;MQ=53.04;MQ0=3;MQRankSum=-2.485;QD=14.32;ReadPosRankSum=-3.478;VQSLOD=2.6280;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:21:6.26:317,6,0	0/1:8,0:8:4.50:184,0,4	0/1:14,0:6:29.75:30,0,85	0/1:20,0:11:15.23:15,0,23	0/1:25,0:25:21.32:21,0,140	1/1:19,0:19:13.54:325,14,0	1/1:2,28:33:8.07:391,8,0	1/1:24,0:24:43.22:777,43,0	./.	0/1:21,0:21:99:259,0,163	0/1:20,0:20:99:162,0,141	1/1:3,3:13:6.02:233,6,0	1/1:4,10:17:15.05:561,15,0	1/1:5,15:25:9.55:404,10,0	./.	1/1:1,9:13:9.03:341,9,0	1/1:20,0:20:12.34:364,12,0	0/0:17,0:16:39.13:0,39,848	1/1:2,8:12:16.76:836,17,0	0/1:0,9:13:0.17:0,0,0	0/0:10,0:20:0.45:0,0,1	0/0:4,15:22:2.91:0,3,21	0/1:2,10:19:0.17:0,0,0	1/1:4,17:24:3.56:136,4,0	0/1:28,0:28:22.05:22,0,211	0/1:3,0:19:20.71:275,0,21	0/1:2,9:11:1.79:382,0,2	1/1:0,0:10:6.02:136,6,0
chr10	99483864	.	GAA	G	4666.53	PASS	AB=0.788;AC=34;AF=0.607;AN=56;BaseQRankSum=4.085;DP=600;FS=7.875;HRun=15;HaplotypeScore=83.5529;InbreedingCoeff=0.8441;MQ=61.02;MQ0=4;MQRankSum=4.216;QD=13.18;ReadPosRankSum=7.635;VQSLOD=3.4080;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:36:80.19:0,80,991	1/1:2,9:11:23.98:211,24,0	0/0:25,0:15:25.12:0,25,225	0/1:21,0:11:13.81:14,0,63	0/0:20,0:19:26.90:0,27,264	0/0:14,0:16:41.08:0,41,473	1/1:4,12:18:29.58:292,30,0	1/1:7,12:20:26.69:278,27,0	0/1:5,7:13:6.05:154,0,6	0/0:32,0:32:72.05:0,72,799	0/0:16,0:28:50.88:0,51,538	1/1:6,14:20:32.79:290,33,0	1/1:7,15:23:38.63:328,39,0	1/1:13,11:24:29.61:245,30,0	1/1:7,11:19:26.81:282,27,0	1/1:2,16:21:38.20:300,38,0	1/1:9,22:34:21.53:553,22,0	0/0:14,0:19:31.36:0,31,403	1/1:6,11:16:8.11:239,8,0	1/1:10,8:19:14.74:176,15,0	1/1:6,9:16:8.62:227,9,0	1/1:6,8:14:23.95:211,24,0	1/1:9,13:22:34.61:315,35,0	1/1:2,15:18:38.71:323,39,0	0/0:17,0:31:42.53:0,43,474	0/0:18,0:19:32.57:0,33,374	1/1:8,13:22:20.63:229,21,0	0/0:14,0:17:29.56:0,30,335
chr10	99485080	.	TTTTTTTTTTTTTG	T	534.37	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=2.759;DP=646;FS=9.839;HRun=0;HaplotypeScore=192.1728;InbreedingCoeff=0.4867;MQ=59.86;MQ0=28;MQRankSum=1.756;QD=10.28;ReadPosRankSum=-3.251;VQSLOD=1.3330;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:21.05:0,21,791	0/0:7,0:7:21.07:0,21,756	0/0:84,0:16:18.91:0,19,698	0/0:81,0:26:36.71:0,37,763	0/1:24,0:24:32.64:33,0,802	0/0:24,0:23:60.18:0,60,2312	0/0:14,0:14:14.92:0,15,1075	0/0:30,0:28:18.63:0,19,1476	0/0:14,0:14:15:0,15,960	0/0:22,0:22:34.58:0,35,1178	0/0:18,0:18:7.24:0,7,417	0/0:9,0:9:27.09:0,27,768	0/0:19,0:19:21.05:0,21,576	0/0:17,0:17:42.10:0,42,1331	0/0:15,0:15:39.11:0,39,1271	0/0:18,0:18:24.02:0,24,1690	1/1:3,15:18:17.74:605,18,0	0/0:23,0:21:35.68:0,36,2165	0/0:22,0:21:57.15:0,57,1520	0/0:15,0:15:45.15:0,45,1588	0/1:10,0:9:0.06:0,0,583	0/0:14,0:14:39.13:0,39,1100	0/0:17,0:17:38.13:0,38,831	0/0:9,0:9:20.54:0,21,587	0/0:12,0:11:30.08:0,30,519	0/0:30,0:30:86.17:0,86,3403	0/0:30,0:29:84.25:0,84,2512	0/0:24,0:23:60.18:0,60,2282
chr10	99485092	.	TG	T	4740.19	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=-0.664;DP=452;FS=16.019;HRun=2;HaplotypeScore=66.1612;InbreedingCoeff=0.6044;MQ=70.03;MQ0=16;MQRankSum=-1.426;QD=12.78;ReadPosRankSum=1.390;VQSLOD=2.3032;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:3.01:36,3,0	1/1:3,0:3:8.93:67,9,0	0/0:63,0:16:8.61:0,9,189	0/1:54,0:22:4.45:4,0,102	1/1:16,0:16:35.10:213,35,0	1/1:17,0:16:36.44:241,36,0	1/1:6,0:6:17.82:127,18,0	1/1:11,0:10:26.86:210,27,0	1/1:11,0:11:32.80:252,33,0	1/1:14,0:14:35.70:266,36,0	1/1:16,0:16:43.43:298,43,0	1/1:4,0:4:11.98:100,12,0	0/1:14,0:14:0:0,0,0	1/1:11,0:11:29.75:221,30,0	1/1:9,0:9:23.97:202,24,0	1/1:14,1:15:35.83:286,36,0	1/1:16,0:16:17.26:92,17,0	0/0:18,0:17:2.44:0,2,153	1/1:17,0:17:38.89:326,39,0	1/1:10,0:10:23.60:149,24,0	1/1:4,0:3:8.88:60,9,0	1/1:11,0:11:29.39:198,29,0	1/1:17,0:17:35.79:280,36,0	1/1:7,0:7:14.89:112,15,0	1/1:8,0:7:17.86:132,18,0	1/1:22,0:22:33.45:219,33,0	1/1:16,0:15:41.76:317,42,0	1/1:20,0:20:47.47:330,47,0
chr10	99486194	.	T	TA	25832.25	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-11.619;DP=775;FS=2.240;HRun=3;HaplotypeScore=64.4350;InbreedingCoeff=0.9997;MQ=85.72;MQ0=0;MQRankSum=-9.893;QD=36.59;ReadPosRankSum=5.839;VQSLOD=4.9733;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,44:46:99:1762,126,0	1/1:1,13:14:33.11:462,33,0	0/0:25,0:25:71.88:0,72,824	0/0:23,0:23:59.97:0,60,613	1/1:0,32:32:87.25:1194,87,0	1/1:1,26:27:69.23:966,69,0	1/1:2,18:20:48.16:672,48,0	1/1:6,30:36:90.25:1191,90,0	1/1:1,27:28:75.25:1050,75,0	1/1:0,29:29:87.26:1198,87,0	1/1:0,19:19:57.19:798,57,0	1/1:0,32:32:81.27:1134,81,0	1/1:2,30:32:81.27:1133,81,0	1/1:2,29:31:81.27:1133,81,0	1/1:2,30:32:81.25:1115,81,0	1/1:1,41:42:99:1428,102,0	1/1:0,30:30:87.29:1217,87,0	0/0:21,0:21:57.17:0,57,673	1/1:1,20:21:60.20:839,60,0	1/1:0,37:37:99:1530,111,0	1/1:1,17:18:48.16:672,48,0	1/1:3,18:21:54.18:753,54,0	1/1:3,21:24:51.03:688,51,0	1/1:3,30:32:87.29:1217,87,0	1/1:1,23:24:63.21:882,63,0	1/1:3,36:39:99:1414,105,0	1/1:2,26:28:69.23:965,69,0	1/1:0,11:11:30.10:420,30,0
chr10	99488348	.	AG	A	9414.80	PASS	AB=0.741;AC=42;AF=0.750;AN=56;BaseQRankSum=4.666;DP=580;FS=4.570;HRun=9;HaplotypeScore=67.5038;InbreedingCoeff=0.8395;MQ=79.87;MQ0=0;MQRankSum=-3.033;QD=21.64;ReadPosRankSum=3.538;VQSLOD=5.7559;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,19:25:51.02:467,51,0	1/1:0,9:9:27.01:247,27,0	0/1:20,2:22:7.24:7,0,382	0/0:25,0:24:26.49:0,26,459	0/0:26,0:26:66.20:0,66,760	1/1:2,24:26:72.04:659,72,0	1/1:3,12:15:33.02:302,33,0	1/1:4,19:23:50.96:453,51,0	1/1:1,22:23:66.04:604,66,0	0/0:29,1:30:35.72:0,36,665	0/0:15,0:15:42.12:0,42,484	1/1:3,19:22:57.03:522,57,0	1/1:2,19:21:51.02:467,51,0	1/1:0,14:14:36.02:329,36,0	1/1:2,18:20:48.02:439,48,0	1/1:1,20:21:57.03:522,57,0	1/1:3,12:15:33.02:302,33,0	0/0:26,0:26:69.18:0,69,773	1/1:2,12:14:36.02:329,36,0	1/1:3,19:22:54.03:494,54,0	1/1:2,16:18:48.02:439,48,0	1/1:0,19:19:54.03:494,54,0	1/1:2,21:23:57.03:522,57,0	1/1:4,16:20:24.56:388,25,0	0/0:21,2:23:8.25:0,8,603	0/1:6,20:26:3.27:468,0,3	1/1:1,26:27:78.04:714,78,0	1/1:1,9:10:27.01:247,27,0
chr10	99489948	.	G	GA	18018.28	PASS	AB=0.524;AC=35;AF=0.625;AN=56;BaseQRankSum=-2.760;DP=743;FS=18.368;HRun=2;HaplotypeScore=111.9563;InbreedingCoeff=0.9405;MQ=89.15;MQ0=0;MQRankSum=-4.582;QD=37.38;ReadPosRankSum=2.703;VQSLOD=2.9796;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:41:99:1545,108,0	0/1:1,10:11:4.04:395,0,4	0/0:34,0:34:90.93:0,91,1004	0/0:20,0:20:50.57:0,51,573	0/0:37,0:37:99:0,105,1287	1/1:2,23:25:60.20:859,60,0	1/1:3,28:31:63.21:902,63,0	1/1:1,27:28:81.25:1126,81,0	1/1:1,30:31:87.29:1245,87,0	0/0:36,0:36:99:0,105,1271	0/0:20,0:20:54.16:0,54,656	1/1:1,42:43:99:1624,114,0	1/1:1,23:24:63.21:901,63,0	1/1:0,18:18:51.17:730,51,0	1/1:3,19:22:59.17:839,59,0	1/1:2,29:32:84.24:1180,84,0	0/0:26,0:26:69.22:0,69,853	0/0:23,0:23:66.21:0,66,816	1/1:2,21:23:63.20:884,63,0	1/1:0,19:19:57.19:814,57,0	1/1:1,18:19:54.18:773,54,0	1/1:0,24:24:69.23:987,69,0	1/1:3,21:24:60.20:859,60,0	1/1:2,26:28:60.20:859,60,0	0/0:39,0:39:99:0,108,1324	0/0:22,0:22:63.20:0,63,777	1/1:1,38:39:99:1497,105,0	0/0:4,0:4:12.04:0,12,148
chr10	99490688	.	AT	A	19536.35	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=0.923;DP=598;FS=1.274;HRun=2;HaplotypeScore=71.7377;InbreedingCoeff=0.9627;MQ=80.60;MQ0=0;MQRankSum=-5.176;QD=35.26;ReadPosRankSum=3.053;VQSLOD=5.3827;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:66.21:857,66,0	1/1:0,8:8:15.05:195,15,0	0/0:18,1:19:56.93:0,57,753	0/0:9,0:9:7.59:0,8,217	1/1:1,39:40:99:1475,114,0	1/1:0,24:24:72.23:931,72,0	1/1:0,10:10:27.09:350,27,0	1/1:1,25:26:75.23:959,75,0	1/1:1,17:18:48.16:623,48,0	1/1:0,35:35:99:1361,105,0	1/1:0,23:23:63.20:814,63,0	1/1:0,10:10:27.09:351,27,0	1/1:1,33:34:93.30:1208,93,0	1/1:0,25:25:66.21:857,66,0	1/1:0,25:25:69.22:896,69,0	1/1:0,12:12:33.11:428,33,0	1/1:1,18:19:42.14:545,42,0	0/0:16,0:16:48.16:0,48,719	1/1:1,22:23:66.21:853,66,0	1/1:0,35:35:96.31:1230,96,0	1/1:0,7:7:21.07:273,21,0	1/1:0,14:14:42.14:545,42,0	1/1:1,23:24:63.20:818,63,0	1/1:0,11:11:24.08:312,24,0	1/1:0,28:28:69.22:896,69,0	1/1:0,34:34:99:1320,102,0	1/1:2,30:32:84.27:1088,84,0	1/1:0,11:11:27.09:351,27,0
chr10	99491382	.	C	CT	23961.69	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-7.700;DP=651;FS=3.185;HRun=2;HaplotypeScore=67.4860;InbreedingCoeff=0.9988;MQ=78.90;MQ0=0;MQRankSum=-6.774;QD=39.15;ReadPosRankSum=5.613;VQSLOD=5.1579;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:5,20:25:63.18:879,63,0	1/1:0,15:15:42.14:605,42,0	0/0:10,0:11:26.82:0,27,304	0/0:18,0:18:47.61:0,48,511	1/1:0,25:25:75.14:1031,75,0	1/1:0,24:24:69.23:993,69,0	1/1:0,20:20:57.19:821,57,0	1/1:2,30:32:90.29:1278,90,0	1/1:0,19:19:54.18:777,54,0	1/1:5,29:34:99:1405,99,0	1/1:1,24:25:66.22:950,66,0	1/1:0,26:26:72.24:1037,72,0	1/1:0,28:28:75.25:1080,75,0	1/1:1,22:23:63.21:907,63,0	1/1:0,26:27:81.27:1160,81,0	1/1:1,20:21:57.66:822,58,0	1/1:3,26:29:87.25:1206,87,0	0/0:10,0:10:24.08:0,24,297	1/1:1,14:15:42.14:597,42,0	1/1:4,27:31:78.26:1115,78,0	1/1:1,27:28:81.25:1146,81,0	1/1:1,24:25:69.23:994,69,0	1/1:1,27:28:69.23:993,69,0	1/1:0,14:14:33.11:475,33,0	1/1:3,24:27:78.24:1089,78,0	1/1:6,17:23:60.17:833,60,0	1/1:0,26:26:69.23:991,69,0	1/1:1,20:21:54.18:777,54,0
chr10	99491471	.	C	CT	7623.30	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=19.362;DP=708;FS=5.335;HRun=1;HaplotypeScore=163.6235;InbreedingCoeff=0.9835;MQ=86.05;MQ0=0;MQRankSum=-6.630;QD=38.70;ReadPosRankSum=1.894;VQSLOD=4.2104;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:72.19:1012,72,0	0/0:2,0:2:6.02:0,6,78	0/0:24,0:24:69.11:0,69,840	0/0:24,0:24:63.13:0,63,766	1/1:5,14:19:42.05:564,42,0	1/1:2,15:18:54.15:739,54,0	0/0:27,0:27:81.23:0,81,1019	0/0:29,0:29:87.25:0,87,1066	0/0:29,0:29:80.85:0,81,1021	1/1:3,24:27:78.21:1117,78,0	1/1:0,18:18:48.16:687,48,0	0/0:29,0:29:84.27:0,84,1090	0/0:33,0:33:90.27:0,90,1150	0/0:32,0:32:90.29:0,90,1167	0/0:32,0:32:96.30:0,96,1231	0/0:32,0:32:90.28:0,90,1154	1/1:0,23:23:63.21:915,63,0	0/0:18,0:18:54.18:0,54,699	0/0:21,0:21:63.19:0,63,791	0/0:32,0:32:93.27:0,93,1175	0/0:33,0:33:96.29:0,96,1218	0/0:20,0:20:57.18:0,57,733	0/0:27,0:27:75.21:0,75,939	0/0:25,0:25:72.21:0,72,906	1/1:0,32:32:93.31:1351,93,0	1/1:2,21:23:66.17:899,66,0	0/0:42,0:42:99:0,117,1517	1/1:4,5:9:27.04:340,27,0
chr10	99492369	.	TG	T	1574.93	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.619;DP=750;FS=9.435;HRun=1;HaplotypeScore=84.6064;InbreedingCoeff=0.9998;MQ=76.93;MQ0=1;MQRankSum=-1.873;QD=35.79;ReadPosRankSum=-1.181;VQSLOD=2.7114;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.18:0,63,955	0/0:15,0:15:45.15:0,45,719	0/0:14,0:14:39.13:0,39,621	0/0:16,0:16:48.10:0,48,710	0/0:47,0:47:99:0,141,2229	0/0:41,0:41:99:0,123,1914	0/0:23,0:23:69.19:0,69,1033	0/0:35,0:35:99:0,105,1614	0/0:31,0:31:93.30:0,93,1461	0/0:42,0:42:99:0,126,1995	0/0:23,0:23:69.24:0,69,1099	0/0:25,0:25:75.26:0,75,1198	0/0:37,0:37:99:0,108,1716	0/0:30,0:30:90.29:0,90,1411	0/0:34,0:34:99:0,102,1532	0/0:32,0:32:96.30:0,96,1487	0/0:23,0:23:66.20:0,66,1028	0/0:20,0:20:60.20:0,60,958	0/0:11,0:11:33.10:0,33,503	0/0:31,0:31:93.32:0,93,1485	0/0:23,0:23:69.22:0,69,1078	0/0:30,0:30:90.29:0,90,1415	0/0:28,0:28:84.25:0,84,1289	0/0:16,0:16:48.15:0,48,744	0/0:26,0:26:78.25:0,78,1218	1/1:1,30:30:42.34:1151,42,0	0/0:30,0:29:90.29:0,90,1413	1/1:0,13:13:39.13:545,39,0
chr10	99492788	.	T	TG	2933.98	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=1.678;DP=627;FS=0.000;HRun=7;HaplotypeScore=71.5418;InbreedingCoeff=0.9872;MQ=81.51;MQ0=1;MQRankSum=-1.130;QD=18.81;ReadPosRankSum=2.607;VQSLOD=3.3370;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:29:72.22:870,72,0	0/0:8,0:8:24.04:0,24,232	0/0:34,0:33:73.63:0,74,680	0/0:21,0:20:24.55:0,25,361	1/1:3,1:23:49.16:280,49,0	1/1:5,30:36:80.86:978,81,0	0/0:19,0:19:51.08:0,51,492	0/0:28,0:28:63.09:0,63,608	0/0:16,0:16:48.08:0,48,463	1/1:4,1:19:8.54:147,9,0	1/1:2,1:17:35.20:203,35,0	0/0:22,0:22:63.10:0,63,608	0/0:19,0:19:48.08:0,48,463	0/0:25,0:25:72.10:0,72,689	0/0:33,0:33:87.13:0,87,839	0/0:21,0:20:63.09:0,63,602	1/1:1,12:13:33.10:399,33,0	0/0:12,0:12:27.04:0,27,260	0/0:29,0:29:72.11:0,72,693	0/0:31,0:31:90.11:0,90,856	0/0:19,0:19:48.05:0,48,456	0/0:22,0:22:62.58:0,63,582	0/0:24,0:24:66.10:0,66,637	0/0:18,0:18:54.04:0,54,512	1/1:1,0:19:50.66:253,51,0	0/0:29,0:29:72.11:0,72,695	0/0:29,0:29:81.11:0,81,776	0/0:12,0:12:36.06:0,36,347
chr10	99493179	.	GT	G	880.78	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.784;DP=642;FS=3.489;HRun=3;HaplotypeScore=62.9055;InbreedingCoeff=0.9969;MQ=83.46;MQ0=0;MQRankSum=-2.649;QD=28.41;ReadPosRankSum=2.042;VQSLOD=3.0058;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.17:0,72,975	0/0:13,0:13:39.13:0,39,561	0/0:24,0:24:69.21:0,69,963	0/0:14,0:14:39.13:0,39,561	0/0:30,0:30:84.28:0,84,1190	0/0:38,0:38:99:0,104,1379	0/0:23,0:23:66.18:0,66,894	0/0:33,0:33:99:0,99,1395	0/0:22,0:22:66.22:0,66,949	0/0:29,0:29:87.25:0,87,1190	0/0:22,0:22:66.19:0,66,913	0/0:19,0:19:57.19:0,57,820	0/0:22,0:22:66.22:0,66,949	0/0:23,0:23:63.13:0,63,880	0/0:38,0:38:99:0,111,1580	0/0:29,0:29:84.28:0,84,1207	0/0:15,0:15:42.05:0,42,540	0/0:9,0:9:27.05:0,27,361	0/0:18,0:17:54.14:0,54,724	0/0:24,0:24:69.23:0,69,992	0/0:23,0:23:66.22:0,66,949	0/0:24,0:24:72.22:0,72,1001	0/0:22,0:22:63.20:0,63,878	0/0:12,0:12:36.12:0,36,518	0/0:26,0:26:75.22:0,75,1014	1/1:2,21:23:23.01:714,23,0	0/0:33,0:32:99:0,99,1425	1/1:0,8:8:24.07:287,24,0
chr10	99493238	.	G	GT	480.72	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.340;DP=608;FS=0.000;HRun=9;HaplotypeScore=62.0485;InbreedingCoeff=0.8962;MQ=75.62;MQ0=0;MQRankSum=-3.371;QD=16.02;ReadPosRankSum=-1.757;VQSLOD=3.3051;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:68.86:0,69,593	0/0:11,0:11:29.98:0,30,260	0/0:22,0:21:38.62:0,39,320	0/0:6,0:6:11.98:0,12,103	0/0:21,0:22:3.30:0,3,347	0/0:38,0:38:99:0,114,980	0/0:19,1:20:20.79:0,21,404	0/0:37,0:37:95.97:0,96,833	0/0:22,0:22:53.95:0,54,464	0/0:39,2:41:32.58:0,33,739	0/0:22,0:23:62.02:0,62,527	0/0:16,0:16:38.98:0,39,336	0/0:27,0:27:80.95:0,81,694	0/0:16,0:16:38.96:0,39,335	0/0:29,0:29:74.94:0,75,645	0/0:26,0:26:62.95:0,63,547	0/0:1,0:18:34.63:0,35,102	0/0:17,0:17:44.97:0,45,390	0/0:16,0:16:47.94:0,48,404	0/0:23,0:23:62.99:0,63,547	0/0:22,0:22:62.97:0,63,542	0/0:20,0:20:53.98:0,54,469	0/0:20,0:20:50.98:0,51,443	0/0:15,0:15:41.99:0,42,365	0/0:13,0:13:38.96:0,39,330	1/1:9,12:22:18.89:412,19,0	0/0:33,0:32:86.97:0,87,755	1/1:1,7:8:18.02:187,18,0
chr10	99494069	.	G	GA	856.88	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.202;DP=551;FS=15.427;HRun=7;HaplotypeScore=55.1069;InbreedingCoeff=0.9986;MQ=84.98;MQ0=0;MQRankSum=-5.020;QD=27.64;ReadPosRankSum=0.663;VQSLOD=2.7106;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:42.13:507,42,0	0/0:12,0:12:27.01:0,27,253	0/0:20,0:20:54.03:0,54,509	0/0:19,0:19:50.84:0,51,478	0/0:20,0:20:57.09:0,57,550	1/1:1,14:15:39.12:471,39,0	0/0:17,0:17:48.08:0,48,463	0/0:32,0:32:75.08:0,75,707	0/0:18,0:18:51.08:0,51,492	0/0:24,0:24:60.06:0,60,571	0/0:20,0:20:48.07:0,48,464	0/0:17,0:17:36.05:0,36,347	0/0:20,0:20:54.08:0,54,521	0/0:16,0:16:45.06:0,45,430	0/0:22,0:22:60.06:0,60,565	0/0:19,0:19:54.09:0,54,521	0/0:18,0:18:48.07:0,48,463	0/0:12,0:12:27.04:0,27,261	0/0:20,0:20:51.07:0,51,489	0/0:27,0:27:75.07:0,75,715	0/0:21,0:21:57.09:0,57,549	0/0:25,0:25:69.11:0,69,666	0/0:18,0:18:39.05:0,39,377	0/0:14,0:14:36.06:0,36,347	0/0:23,0:23:69.11:0,69,666	0/0:23,0:23:60.09:0,60,579	0/0:31,0:31:81.13:0,81,782	0/0:12,0:12:33.05:0,33,319
chr10	99497632	.	CTGTGTGTGTG	C	2046.64	PASS	AB=0.739;AC=19;AF=0.432;AN=44;BaseQRankSum=-1.848;DP=433;FS=0.000;HRun=0;HaplotypeScore=83.7983;InbreedingCoeff=0.5603;MQ=44.61;MQ0=22;MQRankSum=-5.795;QD=11.18;ReadPosRankSum=1.201;VQSLOD=1.5004;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:13:45.73:46,0,424	0/0:2,2:2:0:0,0,0	0/0:19,0:5:3.01:0,3,139	0/0:26,0:3:0:0,0,0	0/0:4,0:7:9.03:0,9,191	0/0:7,0:10:9.03:0,9,273	./.	./.	1/1:3,17:15:18.03:544,18,0	0/0:11,0:14:9.03:0,9,306	0/0:5,0:5:3.01:0,3,91	0/0:6,4:9:0:0,0,0	1/1:3,9:9:3.01:91,3,0	1/1:11,6:10:3.48:71,3,0	1/1:13,9:19:8.87:272,9,0	1/1:10,10:15:6.02:181,6,0	0/0:16,0:33:42.13:0,42,1168	0/0:14,0:24:36.12:0,36,1016	1/1:11,2:9:8.78:181,9,0	1/1:6,3:6:6.02:181,6,0	./.	./.	./.	1/1:12,8:15:1.45:174,1,0	0/0:6,0:12:12.04:0,12,375	0/0:7,0:11:18.06:0,18,404	1/1:10,16:18:15.52:455,16,0	./.
chr10	99498127	.	G	GCA	15971.54	PASS	AB=0.594;AC=45;AF=0.804;AN=56;BaseQRankSum=2.133;DP=717;FS=0.520;HRun=0;HaplotypeScore=162.3723;InbreedingCoeff=0.3922;MQ=58.10;MQ0=7;MQRankSum=2.676;QD=25.19;ReadPosRankSum=4.179;VQSLOD=5.8177;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,3:33:42.80:439,43,0	1/1:2,8:10:21.07:327,21,0	0/0:31,0:20:32.32:0,32,297	0/0:28,0:15:18.54:0,19,182	1/1:10,24:34:72.25:1174,72,0	1/1:3,1:23:33.02:314,33,0	0/1:12,15:27:99:355,0,111	1/1:15,18:33:21.50:778,22,0	1/1:5,21:26:45.15:713,45,0	1/1:6,25:31:75.21:1151,75,0	1/1:6,17:23:11.80:696,12,0	1/1:8,27:36:35.32:1088,35,0	1/1:7,20:28:31.63:740,32,0	1/1:9,18:27:8.24:640,8,0	0/1:4,17:23:22.39:683,0,22	1/1:4,19:23:8.27:648,8,0	1/1:4,1:26:50.96:473,51,0	0/0:24,0:24:46.02:0,46,550	1/1:4,11:14:36.12:545,36,0	1/1:5,19:25:8.23:648,8,0	0/1:6,26:29:22.39:682,0,22	0/1:11,18:29:99:487,0,148	1/1:2,13:15:36.12:586,36,0	1/1:6,28:34:20.22:843,20,0	0/1:8,14:22:15.83:256,0,16	1/1:7,20:26:33.72:830,34,0	1/1:2,21:25:48.02:730,48,0	1/1:2,3:5:9.03:147,9,0
chr10	99498334	.	CT	C	821.52	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.977;DP=593;FS=7.123;HRun=1;HaplotypeScore=60.6615;InbreedingCoeff=0.9654;MQ=90.46;MQ0=0;MQRankSum=-3.111;QD=32.86;ReadPosRankSum=1.865;VQSLOD=2.9285;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.07:0,45,688	0/0:4,0:4:12.04:0,12,192	0/0:33,0:33:99:0,99,1504	0/0:14,0:14:41.95:0,42,567	0/0:28,0:28:81.28:0,81,1293	0/0:26,0:26:75.24:0,75,1173	0/0:14,0:14:42.14:0,42,671	0/0:37,0:37:99:0,111,1697	0/0:16,0:16:48.16:0,48,766	0/0:32,0:32:96.33:0,96,1534	0/0:23,0:23:63.17:0,63,954	0/0:18,0:18:54.18:0,54,863	0/0:21,0:21:63.17:0,63,930	0/0:9,0:9:27.09:0,27,428	0/0:27,0:27:81.28:0,81,1293	0/0:22,0:22:66.21:0,66,1032	1/1:0,25:25:66.22:916,66,0	0/0:16,0:16:45.15:0,45,711	0/0:20,0:20:60.14:0,60,888	0/0:27,0:27:81.26:0,81,1271	0/0:18,0:18:54.17:0,54,838	0/0:24,0:24:63.19:0,63,981	0/0:27,0:27:72.25:0,72,1148	0/0:7,0:7:21.05:0,21,309	0/0:24,0:24:72.23:0,72,1127	0/0:20,0:20:57.19:0,57,888	0/0:32,0:31:96.25:0,96,1477	0/0:13,0:13:39.13:0,39,622
chr10	99501308	.	AT	A	12849.38	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-0.755;DP=452;FS=6.578;HRun=3;HaplotypeScore=45.5269;InbreedingCoeff=0.9575;MQ=68.63;MQ0=1;MQRankSum=-2.420;QD=31.26;ReadPosRankSum=3.749;VQSLOD=4.3710;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:42.13:519,42,0	1/1:0,4:4:9.03:111,9,0	0/0:17,0:11:27.02:0,27,345	0/0:13,0:9:14.82:0,15,204	1/1:1,16:17:45.14:554,45,0	1/1:0,22:22:51.09:611,51,0	1/1:2,14:16:33.10:406,33,0	1/1:1,39:40:99:1341,114,0	1/1:0,12:12:33.10:408,33,0	1/1:1,25:25:75.13:869,75,0	1/1:0,20:20:53.75:565,54,0	1/1:1,14:15:39.12:482,39,0	1/1:0,18:18:45.07:537,45,0	1/1:0,16:16:27.08:334,27,0	1/1:1,16:17:42.13:519,42,0	1/1:0,13:13:30.09:371,30,0	1/1:1,5:6:12.04:148,12,0	0/0:11,0:11:30.09:0,30,406	1/1:0,31:31:93.24:1097,93,0	1/1:0,18:18:48.08:569,48,0	1/1:0,7:7:18.06:222,18,0	1/1:0,8:8:23.93:244,24,0	1/1:0,14:14:39.12:482,39,0	1/1:0,14:14:27.08:334,27,0	1/1:0,12:12:33.10:408,33,0	1/1:0,18:18:54.15:645,54,0	1/1:0,22:22:60.19:742,60,0	1/1:0,9:9:27.08:333,27,0
chr10	99501594	.	GTA	G	390.68	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=-4.226;DP=221;FS=3.952;HRun=0;HaplotypeScore=63.2819;InbreedingCoeff=-0.0381;MQ=69.65;MQ0=1;MQRankSum=2.982;QD=3.18;ReadPosRankSum=-2.645;VQSLOD=1.2477;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,3:5:9.03:115,9,0	./.	0/0:7,0:6:9.01:0,9,105	0/1:16,0:7:6.16:6,0,21	0/0:7,0:7:2.13:0,2,5	1/1:2,5:7:9.03:114,9,0	0/1:8,0:8:29.73:30,0,62	0/1:30,0:29:95.54:96,0,316	0/1:4,0:4:10.77:11,0,67	0/0:17,0:16:20.04:0,20,84	0/0:12,0:9:6.08:0,6,21	0/1:4,0:4:16.67:37,0,17	0/1:2,0:2:0:0,0,0	0/0:1,0:1:3:0,3,26	0/0:3,0:3:9:0,9,78	0/1:6,0:6:10.76:11,0,73	0/1:16,0:15:15.63:16,0,196	0/0:6,0:6:12.02:0,12,174	0/1:10,0:9:31.28:31,0,70	0/0:8,0:8:21.02:0,21,210	0/0:5,0:5:8.44:0,8,73	0/0:2,0:2:3:0,3,26	0/0:9,0:9:12.01:0,12,111	0/1:6,0:6:7.86:8,0,88	0/0:5,0:5:5.85:0,6,20	0/0:7,0:7:17.96:0,18,147	0/1:9,0:9:64.57:65,0,110	0/0:7,0:7:18.02:0,18,173
chr10	99501602	.	A	ATG	898.07	PASS	AB=0.987;AC=16;AF=0.296;AN=54;BaseQRankSum=2.329;DP=195;FS=0.999;HRun=0;HaplotypeScore=57.7742;InbreedingCoeff=0.4534;MQ=61.14;MQ0=1;MQRankSum=-1.834;QD=9.26;ReadPosRankSum=-0.361;VQSLOD=2.6767;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:2.66:7,3,0	./.	0/0:7,0:5:5.20:0,5,128	0/1:17,0:6:4.37:4,0,15	1/1:1,3:4:6.02:99,6,0	0/1:5,0:5:0.93:1,0,1	0/1:6,0:6:29.68:30,0,40	0/1:31,0:30:31.89:32,0,259	0/0:5,0:5:9.34:0,9,58	1/1:3,13:15:23.04:562,23,0	1/1:1,8:6:9.03:148,9,0	0/0:4,0:4:3.21:0,3,19	1/1:1,0:1:2.99:24,3,0	0/0:1,0:1:2.96:0,3,19	0/0:3,0:3:8.85:0,9,56	0/0:5,0:5:9.80:0,10,66	0/0:17,0:15:9.04:0,9,153	0/0:5,0:5:11.94:0,12,181	0/0:6,0:5:10.69:0,11,84	0/0:7,0:7:20.91:0,21,165	0/0:4,0:4:8.78:0,9,56	0/0:1,0:1:2.96:0,3,19	0/0:5,0:5:11.88:0,12,83	0/0:5,0:5:11.19:0,11,73	1/1:0,3:3:9.03:148,9,0	0/0:6,0:6:17.58:0,18,108	0/0:9,0:9:13.05:0,13,98	0/0:7,0:7:18.36:0,18,133
chr10	99501640	.	ATGG	A	112.58	PASS	AB=0.893;AC=7;AF=0.167;AN=42;BaseQRankSum=4.674;DP=126;FS=28.597;HRun=0;HaplotypeScore=54.3410;InbreedingCoeff=-0.1980;MQ=72.66;MQ0=1;MQRankSum=-1.025;QD=1.76;ReadPosRankSum=-0.256;VQSLOD=-0.2011;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:7,0:6:8.73:9,0,148	0/0:16,0:9:12.33:0,12,83	0/1:5,0:5:31.01:31,0,180	0/0:3,0:3:9.03:0,9,212	0/0:2,0:2:6.02:0,6,138	0/1:25,2:25:7.64:8,0,1194	0/1:2,1:3:31.50:31,0,130	0/0:11,0:10:24.08:0,24,564	0/1:6,0:5:30.06:30,0,195	./.	./.	0/0:1,0:1:3:0,3,25	./.	0/0:1,0:1:3.01:0,3,71	0/1:12,0:11:27.43:27,0,503	0/0:7,0:7:21.07:0,21,480	0/0:6,0:5:15.05:0,15,348	0/0:2,0:2:6.02:0,6,142	0/0:1,0:1:3.01:0,3,71	./.	0/0:1,0:1:3.01:0,3,52	0/0:1,0:1:3.01:0,3,71	0/0:1,0:1:3.01:0,3,71	0/0:7,0:7:21.06:0,21,417	./.	0/1:1,3:4:2.02:88,0,2
chr10	99501652	.	T	TA	293.83	PASS	AB=0.900;AC=7;AF=0.175;AN=40;BaseQRankSum=3.387;DP=107;FS=4.117;HRun=0;HaplotypeScore=49.8332;InbreedingCoeff=-0.0048;MQ=70.60;MQ0=2;MQRankSum=-1.809;QD=6.25;ReadPosRankSum=-0.231;VQSLOD=2.9235;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/1:1,0:1:0:0,0,0	0/0:4,0:4:8.82:0,9,93	0/0:9,0:6:0.57:0,1,39	0/0:6,0:6:9.03:0,9,114	0/0:3,0:3:9.03:0,9,126	0/0:1,0:1:3.01:0,3,42	0/1:16,5:18:99:130,0,470	0/1:2,0:2:28.27:28,0,36	0/0:8,0:8:23.10:0,23,283	0/0:9,0:8:3.49:0,3,149	./.	./.	./.	./.	0/0:1,0:1:3.01:0,3,42	0/1:10,2:11:78.82:79,0,261	0/0:7,0:7:18.06:0,18,252	0/0:5,0:5:5.94:0,6,82	0/0:2,0:2:6.02:0,6,79	0/0:1,0:1:3.01:0,3,40	./.	./.	0/0:1,0:1:3.01:0,3,40	0/0:2,0:2:5.97:0,6,60	0/1:4,1:5:52.69:53,0,111	./.	1/1:2,4:4:9.02:113,9,0
chr10	99501658	.	T	TTATATATGTTTTATATA	5894.80	PASS	AB=1.000;AC=35;AF=0.875;AN=40;BaseQRankSum=1.762;DP=104;FS=9.230;HRun=0;HaplotypeScore=72.6852;InbreedingCoeff=0.4289;MQ=57.77;MQ0=2;MQRankSum=-1.684;QD=69.35;ReadPosRankSum=-1.096;VQSLOD=3.1629;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,0:1:2.92:17,3,0	./.	0/0:7,0:4:4.76:0,5,47	1/1:2,3:7:8.66:233,9,0	1/1:3,0:3:9.01:120,9,0	1/1:2,0:2:2.99:24,3,0	1/1:20,0:17:42.14:1865,42,0	1/1:2,0:2:6.02:230,6,0	1/1:4,0:4:11.97:265,12,0	1/1:6,2:8:21.07:656,21,0	./.	./.	1/1:2,0:2:3:25,3,0	1/1:2,0:2:5.99:50,6,0	1/1:1,0:1:3.01:38,3,0	1/1:12,0:11:27.06:1030,27,0	0/0:7,0:7:15.03:0,15,602	1/1:4,0:4:3:27,3,0	1/1:1,0:1:2.97:20,3,0	./.	./.	./.	./.	1/1:3,0:3:9.02:139,9,0	1/1:6,0:6:18:714,18,0	0/1:1,0:1:0:0,0,0	1/1:5,0:4:9.03:441,9,0
chr10	99504377	.	GACTGA	G	3636.09	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.294;DP=688;FS=5.677;HRun=0;HaplotypeScore=135.0868;InbreedingCoeff=0.9709;MQ=53.55;MQ0=14;MQRankSum=-10.550;QD=44.34;ReadPosRankSum=-1.544;VQSLOD=2.9369;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.31:0,93,2862	0/0:14,0:14:42.14:0,42,1314	0/0:23,0:3:6.02:0,6,177	0/0:28,0:9:27.09:0,27,830	1/1:3,28:31:47.76:995,48,0	0/0:15,0:14:42.14:0,42,1332	0/0:28,0:28:84.25:0,84,2426	0/0:28,0:28:81.28:0,81,2472	0/0:22,0:22:66.17:0,66,1908	1/1:2,19:20:57.07:1217,57,0	1/1:1,14:14:30.02:559,30,0	0/0:41,0:41:99:0,123,3661	0/0:26,0:26:75.26:0,75,2315	0/0:14,0:14:42.14:0,42,1310	0/0:22,0:22:66.23:0,66,2038	0/0:21,0:21:63.20:0,63,1897	0/0:30,0:30:87.30:0,87,2650	0/0:19,0:19:51.17:0,51,1514	0/0:24,0:20:57.20:0,57,1805	0/0:32,0:32:90.31:0,90,2760	0/0:52,0:52:99:0,157,4746	0/0:32,0:32:96.33:0,96,2928	0/0:23,0:23:69.21:0,69,2019	0/0:20,0:20:60.21:0,60,1886	1/1:0,14:15:42.10:865,42,0	0/0:24,0:24:72.25:0,72,2267	0/0:25,0:25:72.25:0,72,2231	0/0:11,0:11:33.11:0,33,1040
chr10	99504653	.	CA	C	78.76	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.504;DP=613;FS=10.587;HRun=8;HaplotypeScore=78.9784;InbreedingCoeff=0.7899;MQ=64.27;MQ0=0;MQRankSum=-1.090;QD=7.88;ReadPosRankSum=-0.938;VQSLOD=0.5096;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:29.45:0,29,345	0/0:9,0:9:27.08:0,27,326	0/0:23,1:20:13.91:0,14,370	0/0:17,0:15:23.86:0,24,227	0/0:26,0:26:37.14:0,37,365	0/0:23,0:23:64.48:0,64,407	0/0:19,0:19:57.13:0,57,672	0/0:32,0:32:81.22:0,81,950	0/0:28,0:28:81.25:0,81,979	0/0:19,0:19:54.36:0,54,309	0/0:22,0:22:58.32:0,58,369	0/0:14,0:14:42.13:0,42,507	0/0:19,0:19:54.15:0,54,641	0/0:25,0:25:69.11:0,69,813	0/0:21,0:21:57.17:0,57,689	0/0:22,0:22:57.16:0,57,677	1/1:1,9:10:4.24:157,4,0	0/0:15,1:16:12.82:0,13,417	0/0:19,0:19:48.15:0,48,580	0/0:34,0:34:96.27:0,96,1138	0/0:11,0:11:30.09:0,30,362	0/0:30,1:31:61.29:0,61,1011	0/0:27,0:28:81.10:0,81,937	0/0:19,0:19:57.11:0,57,670	0/0:19,0:19:49.10:0,49,276	0/0:23,0:23:65.86:0,66,752	0/0:37,0:36:99:0,102,1221	0/0:16,0:16:45.11:0,45,519
chr10	99510016	.	C	CA	379.77	PASS	AB=1.000;AC=23;AF=0.958;AN=24;DP=38;FS=0.000;HRun=1;HaplotypeScore=16.7088;InbreedingCoeff=0.0354;MQ=45.92;MQ0=3;QD=14.07;VQSLOD=2.5477;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/1:2,0:1:0:0,0,0	1/1:0,2:2:5.94:42,6,0	./.	./.	1/1:0,6:5:15.04:171,15,0	1/1:0,3:2:5.97:44,6,0	./.	./.	1/1:0,4:2:5.97:43,6,0	1/1:0,1:1:2.96:19,3,0	1/1:0,2:2:2.60:10,3,0	1/1:0,2:1:2.98:22,3,0	./.	./.	./.	1/1:0,1:1:3.01:32,3,0	./.	1/1:1,1:1:2.98:22,3,0	./.	./.	1/1:0,1:1:2.94:18,3,0	./.	1/1:0,1:1:3:28,3,0	./.	./.
chr10	99511680	.	CT	C	2600.54	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=12.796;DP=500;FS=3.907;HRun=6;HaplotypeScore=51.8796;InbreedingCoeff=0.9895;MQ=69.95;MQ0=0;MQRankSum=-0.289;QD=28.89;ReadPosRankSum=1.337;VQSLOD=4.3694;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.20:0,66,852	0/0:4,0:4:12.04:0,12,158	./.	0/0:12,0:11:20.90:0,21,223	1/1:0,26:26:78.16:826,78,0	0/0:17,0:17:48.16:0,48,631	0/0:11,0:11:33.09:0,33,418	0/0:32,0:32:84.27:0,84,1093	0/0:16,0:16:48.14:0,48,617	1/1:0,21:21:60.11:627,60,0	1/1:0,18:18:54.05:565,54,0	0/0:14,0:14:39.10:0,39,495	0/0:15,0:15:45.15:0,45,588	0/0:14,0:14:42.13:0,42,536	0/0:16,0:16:45.13:0,45,575	0/0:22,0:22:60.18:0,60,775	0/0:13,0:13:39.13:0,39,512	0/0:20,0:20:54.12:0,54,673	0/0:22,0:22:66.20:0,66,853	0/0:31,0:31:87.27:0,87,1132	0/0:10,0:10:27.06:0,27,326	0/0:22,0:22:63.20:0,63,828	0/0:27,0:27:81.25:0,81,1049	0/0:9,0:9:27.09:0,27,354	1/1:1,24:25:69.17:742,69,0	0/0:19,0:19:57.19:0,57,750	0/0:24,0:24:66.21:0,66,867	0/0:12,0:12:36.12:0,36,474
chr10	99511779	.	G	GT	4650.41	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=2.314;DP=513;FS=2.284;HRun=5;HaplotypeScore=52.2122;InbreedingCoeff=0.9283;MQ=69.02;MQ0=0;MQRankSum=2.742;QD=33.70;ReadPosRankSum=0.850;VQSLOD=5.1887;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:42.14:553,42,0	0/0:3,0:3:9.02:0,9,97	0/0:7,0:7:7.68:0,8,34	0/0:3,0:3:3.01:0,3,32	1/1:1,26:27:75.20:962,75,0	1/1:2,15:17:36.12:473,36,0	0/0:12,0:12:27.03:0,27,273	0/0:26,0:26:69.16:0,69,736	0/0:17,0:17:48.12:0,48,516	1/1:1,23:25:72.18:886,72,0	1/1:1,23:24:63.20:829,63,0	0/0:14,0:14:36.08:0,36,380	0/0:17,0:17:48.11:0,48,509	0/0:16,0:16:42.09:0,42,443	0/0:21,0:21:51.10:0,51,534	0/0:17,0:17:42.10:0,42,451	0/0:23,0:23:69.17:0,69,741	0/0:28,0:28:66.12:0,66,691	0/0:22,0:22:63.13:0,63,661	0/0:25,0:26:74.22:0,74,780	0/0:14,0:14:36.09:0,36,386	0/0:18,0:18:54.11:0,54,564	0/0:21,0:21:60.15:0,60,644	0/0:18,0:18:54.14:0,54,580	1/1:3,24:27:72.23:947,72,0	0/0:25,0:25:60.13:0,60,634	0/0:22,0:22:63.16:0,63,677	0/0:5,0:5:9.02:0,9,97
chr10	99512251	.	TA	T	1609.04	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.569;DP=596;FS=11.408;HRun=10;HaplotypeScore=69.1489;InbreedingCoeff=0.9887;MQ=83.07;MQ0=1;MQRankSum=-0.038;QD=19.16;ReadPosRankSum=3.164;VQSLOD=4.0070;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:18:25.43:0,25,124	0/0:7,0:7:14.87:0,15,147	0/0:19,0:18:26.24:0,26,259	0/0:22,1:21:42.07:0,42,450	1/1:1,25:26:68.96:598,69,0	0/0:2,0:23:45.93:0,46,231	0/0:13,0:13:27.06:0,27,291	0/0:27,0:27:72.19:0,72,797	0/0:20,0:20:51.14:0,51,564	1/1:6,21:27:59.88:520,60,0	1/1:2,14:16:35.94:312,36,0	0/0:24,1:25:49.12:0,49,752	0/0:18,0:18:42.11:0,42,457	0/0:23,0:23:63.17:0,63,697	0/0:21,0:21:54.10:0,54,571	0/0:27,1:28:52.13:0,52,788	0/0:27,0:27:75.04:0,75,782	0/0:10,0:10:24.02:0,24,252	0/0:16,0:17:35.92:0,36,367	0/0:36,0:36:99:0,99,1017	0/0:19,0:19:57.15:0,57,630	0/0:32,0:32:78.14:0,78,825	0/0:21,0:21:57.07:0,57,593	0/0:11,0:11:24.06:0,24,265	1/1:1,14:15:38.99:338,39,0	0/0:26,1:27:46.13:0,46,711	0/0:41,0:40:99:0,117,1294	0/0:6,0:6:14.99:0,15,151
chr10	99514430	.	GAC	G	2004.21	PASS	AB=0.786;AC=49;AF=0.942;AN=52;BaseQRankSum=2.393;DP=485;FS=4.160;HRun=0;HaplotypeScore=68.1861;InbreedingCoeff=0.0742;MQ=67.53;MQ0=4;MQRankSum=0.694;QD=4.97;ReadPosRankSum=0.439;VQSLOD=2.0981;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:12:2.84:14,3,0	1/1:4,4:8:9.02:97,9,0	./.	./.	1/1:20,0:20:2.80:13,3,0	1/1:18,0:24:14.20:70,14,0	1/1:10,0:14:8.69:60,9,0	0/0:30,0:28:0.89:0,1,2	1/1:15,4:19:15.03:162,15,0	0/1:16,0:22:9.77:50,0,10	1/1:10,0:15:10.08:46,10,0	1/1:11,4:15:17.87:176,18,0	1/1:6,4:10:9.02:97,9,0	1/1:15,2:17:3:32,3,0	1/1:10,6:16:9.49:98,9,0	1/1:12,4:17:8.86:79,9,0	1/1:13,0:20:22.73:112,23,0	1/1:13,2:14:8.86:78,9,0	1/1:5,3:7:3:32,3,0	1/1:5,6:11:9.02:97,9,0	1/1:21,0:21:6.01:65,6,0	1/1:12,6:19:11.86:112,12,0	1/1:11,6:17:15.04:161,15,0	1/1:13,7:20:18.05:194,18,0	1/1:13,1:18:8.69:60,9,0	1/1:17,0:17:3:26,3,0	1/1:13,5:19:14.87:144,15,0	1/1:6,0:8:2.84:14,3,0
chr10	99514986	.	A	AT	7573.67	PASS	AB=0.715;AC=41;AF=0.732;AN=56;BaseQRankSum=-10.372;DP=426;FS=0.974;HRun=10;HaplotypeScore=58.0723;InbreedingCoeff=0.7317;MQ=79.34;MQ0=0;MQRankSum=0.275;QD=22.34;ReadPosRankSum=-1.301;VQSLOD=5.2557;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:32.95:0,33,271	1/1:0,4:4:11.99:116,12,0	0/0:14,0:14:3.25:0,3,102	0/1:12,0:10:10.01:14,0,10	1/1:6,17:23:29.49:519,29,0	0/0:15,0:15:44.91:0,45,363	1/1:3,13:16:33.08:352,33,0	1/1:3,20:23:60.15:640,60,0	1/1:1,13:14:33.08:352,33,0	1/1:4,19:23:32.50:551,32,0	1/1:4,16:21:26.32:470,26,0	1/1:0,10:10:21.05:224,21,0	1/1:0,9:9:24.06:256,24,0	1/1:0,10:10:27.07:288,27,0	1/1:2,11:13:27.07:288,27,0	0/1:1,7:8:0.58:200,0,1	1/1:5,0:12:22.85:120,23,0	0/0:9,0:9:23.97:0,24,197	1/1:7,14:21:20.46:417,20,0	1/1:5,25:31:53.39:757,53,0	1/1:1,9:10:27.07:288,27,0	1/1:3,17:20:23.48:455,23,0	1/1:4,20:25:47.94:494,48,0	1/1:1,8:9:24.06:256,24,0	0/1:4,7:11:25.23:168,0,25	0/0:2,0:25:46.85:0,47,138	1/1:2,12:14:33.08:352,33,0	0/0:1,0:10:18.33:0,18,54
chr10	99515007	.	A	AT	149.21	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.070;DP=440;FS=1.221;HRun=8;HaplotypeScore=82.1917;InbreedingCoeff=0.7376;MQ=75.83;MQ0=0;MQRankSum=-2.226;QD=14.92;ReadPosRankSum=-1.263;VQSLOD=3.6035;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:24:0,24,220	0/0:4,0:4:6:0,6,55	0/0:14,0:13:5.20:0,5,100	0/0:9,0:7:7.13:0,7,80	0/0:26,0:26:78.01:0,78,703	0/0:16,0:16:48.03:0,48,439	0/0:13,0:13:24:0,24,219	0/0:31,1:32:43.40:0,43,645	0/0:14,0:14:30:0,30,275	0/0:25,0:25:69.02:0,69,628	0/0:24,0:24:65.98:0,66,590	0/0:8,0:8:15:0,15,137	0/0:12,0:12:33.02:0,33,302	0/0:11,0:11:24:0,24,220	0/0:12,0:12:30.02:0,30,275	0/0:9,0:9:24.01:0,24,220	1/1:2,7:10:21.06:241,21,0	0/0:9,0:9:27.01:0,27,247	0/0:21,0:21:57.03:0,57,522	0/0:33,0:33:93.04:0,93,847	0/0:9,0:9:24.01:0,24,220	0/0:20,0:20:48.02:0,48,439	0/0:22,0:22:59.99:0,60,538	0/0:12,0:12:33.02:0,33,302	0/0:12,0:12:30:0,30,271	0/0:26,0:26:63.01:0,63,570	0/0:15,0:15:39.01:0,39,357	0/0:10,0:10:27:0,27,247
chr10	99515725	.	A	AATC	8557.39	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-1.851;DP=700;FS=7.723;HRun=0;HaplotypeScore=101.1104;InbreedingCoeff=0.9994;MQ=86.47;MQ0=0;MQRankSum=-6.464;QD=50.94;ReadPosRankSum=4.471;VQSLOD=7.2554;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,39:42:96.33:2191,96,0	0/0:9,0:9:27.09:0,27,460	0/0:23,0:23:60.18:0,60,972	0/0:31,0:31:84.16:0,84,1339	1/1:1,29:32:75.03:1556,75,0	1/1:4,20:25:54.18:1242,54,0	0/0:24,0:24:72.22:0,72,1172	0/0:31,0:31:90.28:0,90,1432	0/0:23,0:23:63.19:0,63,1000	1/1:0,25:26:75.17:1565,75,0	1/1:3,15:19:39.13:898,39,0	0/0:16,0:16:45.13:0,45,715	0/0:21,0:21:60.18:0,60,961	0/0:25,0:25:75.26:0,75,1263	0/0:31,0:31:93.28:0,93,1497	0/0:32,0:32:96.31:0,96,1576	0/0:39,0:39:99:0,114,1925	0/0:21,0:21:51.17:0,51,869	0/0:18,0:18:51.17:0,51,843	0/0:18,0:18:54.17:0,54,894	0/0:38,0:38:99:0,111,1840	0/0:16,0:16:45.15:0,45,757	0/0:26,0:26:75.21:0,75,1193	0/0:26,0:26:72.23:0,72,1201	1/1:2,21:23:48.16:1106,48,0	0/0:25,0:25:28.48:0,28,1146	0/0:30,0:30:87.27:0,87,1410	0/0:9,0:9:27.08:0,27,413
chr10	99518073	.	TACACACACACACACACACAC	T	9045.11	PASS	AB=0.731;AC=41;AF=0.732;AN=56;BaseQRankSum=5.884;DP=550;FS=26.349;HRun=0;HaplotypeScore=331.3345;InbreedingCoeff=0.7930;MQ=56.51;MQ0=5;MQRankSum=-4.145;QD=23.68;ReadPosRankSum=2.265;VQSLOD=2.2891;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,10:35:3.29:789,3,0	1/1:3,1:4:8.68:49,9,0	0/0:19,0:15:24.07:0,24,731	0/0:21,0:15:24.08:0,24,737	0/0:18,0:18:11.83:0,12,456	1/1:7,7:14:21.93:253,22,0	1/1:13,2:15:22.15:130,22,0	1/1:34,0:31:39.88:507,40,0	1/1:4,6:10:23.73:601,24,0	0/0:23,0:23:63.22:0,63,2745	1/1:12,0:11:1.15:4,1,0	1/1:10,6:16:33.14:455,33,0	1/1:9,5:14:30.36:529,30,0	1/1:13,3:17:22.06:595,22,0	1/1:11,7:18:28.79:482,29,0	1/1:12,6:18:31.54:579,32,0	0/0:32,0:32:42.08:0,42,1242	0/0:25,0:29:69.24:0,69,4313	1/1:14,2:16:13.91:385,14,0	1/1:13,6:19:15.68:358,16,0	1/1:37,0:37:23.43:171,23,0	1/1:6,5:11:19.40:119,19,0	1/1:19,5:25:26.03:407,26,0	1/1:12,2:14:5.46:14,5,0	0/0:26,0:25:14.04:0,14,671	0/1:12,7:19:99:1110,0,197	1/1:23,9:32:63.53:1332,64,0	1/1:0,2:2:5.97:176,6,0
chr10	99518100	.	A	AAATG	2075.41	PASS	AB=0.929;AC=27;AF=0.482;AN=56;BaseQRankSum=0.367;DP=499;FS=13.133;HRun=0;HaplotypeScore=217.2199;InbreedingCoeff=0.1824;MQ=38.70;MQ0=9;MQRankSum=-3.724;QD=6.57;ReadPosRankSum=-2.254;VQSLOD=1.1747;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,4:28:19.70:264,20,0	1/1:4,1:5:5.93:40,6,0	0/0:8,0:3:3.01:0,3,62	0/0:11,0:3:9.02:0,9,105	0/0:17,0:17:7.06:0,7,103	1/1:15,2:17:19.49:182,19,0	1/1:10,3:13:14.80:100,15,0	0/1:23,1:21:99:120,0,281	0/1:13,0:13:40.64:79,0,41	0/0:24,0:24:63.12:0,63,887	0/0:15,0:14:0.63:0,1,1	0/1:16,1:17:6.79:135,0,7	0/1:15,1:16:12.95:101,0,13	0/1:12,0:12:8.03:8,0,62	0/1:11,2:13:2.53:145,0,3	0/1:15,3:18:29.68:98,0,30	0/0:35,0:34:26.24:0,26,349	0/0:31,0:31:78.24:0,78,1478	0/0:12,0:11:11.26:0,11,96	1/1:18,3:21:10.69:126,11,0	1/1:22,12:34:28.61:164,29,0	1/1:11,2:12:13.80:130,14,0	0/1:12,2:14:8.31:78,0,8	1/1:9,3:12:9.83:61,10,0	0/0:30,0:27:35.59:0,36,455	0/1:18,1:19:7.14:7,0,163	0/1:19,5:24:98.82:405,0,99	0/1:2,0:2:14.94:15,0,23
chr10	99518111	.	CGCGCG	C	1346.97	PASS	AB=0.968;AC=33;AF=0.635;AN=52;BaseQRankSum=7.777;DP=510;FS=7.516;HRun=0;HaplotypeScore=210.3512;InbreedingCoeff=0.2133;MQ=45.68;MQ0=8;MQRankSum=-7.459;QD=3.42;ReadPosRankSum=3.763;VQSLOD=1.3264;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:12.29:57,12,0	./.	0/0:9,0:4:5.83:0,6,83	0/0:17,0:5:6.02:0,6,127	0/0:16,0:16:8.48:0,8,170	1/1:16,0:16:4.16:15,4,0	1/1:13,0:13:0.40:1,0,0	0/1:25,0:25:97.69:223,0,98	1/1:15,0:15:11.66:73,12,0	0/1:22,3:25:99:197,0,1170	0/0:12,1:13:5.71:0,6,134	1/1:20,0:20:5.78:31,6,0	1/1:18,0:18:9.62:54,10,0	1/1:15,0:15:8.77:52,9,0	1/1:14,0:14:5.75:32,6,0	1/1:23,0:23:8.71:49,9,0	0/1:35,0:34:27.23:27,0,237	0/0:30,0:30:78.27:0,78,2250	0/1:16,0:15:80.41:112,0,80	1/1:23,0:23:5.49:29,5,0	0/1:22,0:22:2.59:6,0,3	./.	1/1:13,0:13:5.75:32,6,0	0/0:10,0:10:0:0,0,0	0/1:27,3:28:99:127,0,655	0/1:22,0:22:51.36:217,0,51	1/1:18,0:18:23.06:124,23,0	1/1:5,0:5:10.94:48,11,0
chr10	99518112	.	GCGCGCA	G	5872.33	PASS	AB=0.766;AC=36;AF=0.692;AN=52;BaseQRankSum=3.637;DP=512;FS=4.364;HRun=0;HaplotypeScore=199.9425;InbreedingCoeff=0.4934;MQ=45.68;MQ0=8;MQRankSum=-5.753;QD=15.70;ReadPosRankSum=2.709;VQSLOD=4.2792;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:24:14.11:276,14,0	./.	0/0:11,0:5:9.91:0,10,111	0/0:18,0:5:9.01:0,9,145	0/0:16,0:16:8.67:0,9,195	1/1:0,16:16:3.90:70,4,0	1/1:0,13:13:0.47:1,0,0	1/1:0,25:25:65.64:1231,66,0	1/1:1,14:15:18.06:370,18,0	0/1:25,0:25:38.61:39,0,1220	0/0:13,0:13:4.62:0,5,150	1/1:0,20:20:6.02:126,6,0	1/1:0,18:18:12.04:241,12,0	1/1:0,15:15:9.03:188,9,0	1/1:0,14:14:6.02:130,6,0	1/1:1,22:23:9.03:194,9,0	0/1:36,0:35:44.47:44,0,156	0/0:29,0:29:78.27:0,78,2204	1/1:2,14:15:38.89:733,39,0	1/1:1,22:23:6.02:133,6,0	1/1:8,13:22:8.57:66,9,0	./.	1/1:0,13:13:6.02:126,6,0	0/1:1,9:10:0:0,0,0	0/0:31,0:28:9.47:0,9,808	0/1:3,19:22:14.59:1087,0,15	1/1:0,18:18:24.08:529,24,0	1/1:3,2:5:12.04:287,12,0
chr10	99518116	.	G	GCGCGCA	2418.77	PASS	AB=0.991;AC=13;AF=0.250;AN=52;BaseQRankSum=-5.690;DP=527;FS=6.915;HRun=0;HaplotypeScore=218.9170;InbreedingCoeff=0.3943;MQ=47.12;MQ0=9;MQRankSum=1.606;QD=12.60;ReadPosRankSum=-3.287;VQSLOD=1.7564;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:12.04:0,12,182	./.	0/0:17,0:6:5.61:0,6,60	0/0:22,0:9:5.67:0,6,69	1/1:12,3:19:12.62:173,13,0	0/0:16,0:16:2.90:0,3,45	0/1:13,0:13:0:0,0,0	0/0:25,0:25:62.57:0,63,763	0/0:15,0:15:17.99:0,18,248	1/1:22,5:28:0.21:1293,0,0	1/1:11,3:14:8.35:158,8,0	0/0:20,0:20:6.02:0,6,82	0/0:18,0:18:11.97:0,12,140	0/0:15,0:15:9.03:0,9,144	0/0:14,0:14:6.02:0,6,94	0/0:23,0:23:9.03:0,9,142	0/1:35,0:34:85.88:139,0,86	0/0:29,0:29:81.15:0,81,1582	0/0:16,0:15:40.95:0,41,467	0/0:23,0:23:6.49:0,6,95	0/1:20,0:20:12.14:12,0,26	./.	0/0:13,0:13:6.02:0,6,97	0/1:10,0:10:0:0,0,0	1/1:23,5:28:19.96:733,20,0	0/1:21,1:22:55.12:55,0,663	0/0:18,0:18:24.08:0,24,367	0/0:5,0:5:12.04:0,12,172
chr10	99518480	.	AGAG	A	11119.98	PASS	AB=0.800;AC=35;AF=0.625;AN=56;BaseQRankSum=6.245;DP=607;FS=9.235;HRun=0;HaplotypeScore=103.1233;InbreedingCoeff=0.9126;MQ=62.13;MQ0=4;MQRankSum=-0.953;QD=28.96;ReadPosRankSum=4.682;VQSLOD=4.7239;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:42.14:0,42,839	1/1:1,9:10:18.06:262,18,0	0/0:29,0:14:11.45:0,11,271	0/0:32,0:21:7.11:0,7,443	0/0:29,0:29:78.25:0,78,1521	0/0:18,0:18:36.12:0,36,728	0/1:12,4:16:7.46:268,0,7	1/1:6,8:13:24.03:292,24,0	1/1:3,13:14:27.09:403,27,0	0/0:26,0:26:66.22:0,66,1277	0/0:19,0:19:48.16:0,48,930	1/1:4,13:17:30.10:448,30,0	1/1:2,19:21:33.11:493,33,0	1/1:2,20:22:51.17:762,51,0	1/1:5,25:28:51.17:754,51,0	1/1:3,29:32:63.21:942,63,0	0/0:20,0:20:45.15:0,45,856	0/0:18,0:18:42.14:0,42,832	1/1:3,10:13:30.06:421,30,0	1/1:2,22:24:63.16:880,63,0	1/1:4,19:23:36.12:538,36,0	1/1:3,22:25:68.98:906,69,0	1/1:3,24:27:56.96:851,57,0	1/1:10,17:27:44.89:640,45,0	0/0:13,0:13:39.13:0,39,744	1/1:4,31:35:20.73:1287,21,0	1/1:8,13:22:51.17:748,51,0	1/1:0,10:9:15.05:224,15,0
chr10	99518540	.	GA	G	449.35	PASS	AB=0.571;AC=1;AF=0.018;AN=56;BaseQRankSum=1.708;DP=599;FS=0.000;HRun=2;HaplotypeScore=133.4874;InbreedingCoeff=-0.0236;MQ=55.88;MQ0=4;MQRankSum=2.072;QD=22.47;ReadPosRankSum=2.433;VQSLOD=3.5033;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.12:0,39,562	0/0:11,0:11:30.10:0,30,450	0/0:26,2:17:4.65:0,5,459	0/0:19,0:13:33.10:0,33,460	0/0:37,0:37:99:0,111,1636	0/0:16,0:15:42.10:0,42,604	0/0:14,0:13:33.54:0,34,470	0/0:23,0:23:60.19:0,60,864	0/0:26,0:24:63.21:0,63,934	0/0:27,0:26:78.26:0,78,1169	0/0:25,0:23:69.23:0,69,1033	0/0:16,0:16:48.12:0,48,687	0/0:22,0:22:51.60:0,52,734	0/0:25,0:25:72.21:0,72,1053	0/0:19,0:18:45.07:0,45,625	0/0:27,0:27:57.19:0,57,846	0/1:5,15:20:99:524,0,145	0/0:22,0:22:63.12:0,63,893	0/0:11,0:10:27.09:0,27,404	0/0:23,0:23:63.21:0,63,941	0/0:7,0:7:15.05:0,15,224	0/0:27,0:27:81.27:0,81,1194	0/0:23,0:23:57.09:0,57,854	0/0:22,0:22:63.11:0,63,910	0/0:31,0:29:87.29:0,87,1285	0/0:33,0:32:96.18:0,96,1341	0/0:20,0:20:56.99:0,57,795	0/0:12,0:12:30.10:0,30,450
chr10	99518564	.	G	GAAA	7420.25	PASS	AB=0.991;AC=29;AF=0.518;AN=56;BaseQRankSum=-10.503;DP=733;FS=1.461;HRun=2;HaplotypeScore=167.2078;InbreedingCoeff=-0.4820;MQ=45.00;MQ0=10;MQRankSum=8.860;QD=10.93;ReadPosRankSum=9.674;VQSLOD=0.7607;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:8.32:180,8,0	1/1:16,0:15:28.76:277,29,0	0/0:17,0:10:20.46:0,20,205	0/0:9,0:5:7.72:0,8,108	0/1:49,0:44:52.16:457,0,52	0/1:20,0:19:54.66:274,0,55	0/1:21,0:16:55.72:118,0,56	0/1:31,0:21:80.89:233,0,81	0/1:33,0:31:51.08:348,0,51	0/1:38,1:36:99:607,0,142	0/1:42,1:34:99:573,0,117	1/1:25,0:23:20.99:293,21,0	0/1:32,0:31:85.21:295,0,85	1/1:21,0:20:7.69:386,8,0	0/1:22,4:19:60.15:438,0,60	0/1:28,0:27:90.30:166,0,90	0/1:25,0:25:84.77:329,0,85	0/1:18,0:17:73.59:74,0,208	0/1:25,0:24:71.86:232,0,72	0/1:34,0:33:4.91:383,0,5	0/1:7,0:7:16.79:20,0,17	0/1:33,0:32:30.35:370,0,30	0/1:31,0:28:63.84:142,0,64	0/1:23,0:22:3.33:228,0,3	0/1:44,0:37:92.42:736,0,92	0/0:27,0:26:71.37:0,71,566	0/1:32,0:28:24.68:253,0,25	0/1:13,0:13:7.95:8,0,117
chr10	99518621	.	GAAA	G	7982.79	PASS	AB=0.771;AC=22;AF=0.393;AN=56;BaseQRankSum=3.351;DP=793;FS=20.796;HRun=5;HaplotypeScore=227.0391;InbreedingCoeff=-0.1833;MQ=36.71;MQ0=25;MQRankSum=-5.751;QD=16.09;ReadPosRankSum=0.628;VQSLOD=-0.1453;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,4:11:7.75:160,8,0	0/1:8,4:11:95.79:187,0,96	0/0:21,0:6:18.06:0,18,262	0/0:20,0:3:8.39:0,8,124	0/0:52,0:47:88.14:0,88,732	0/1:14,11:24:99:483,0,199	0/1:13,10:18:80.17:246,0,80	0/1:30,5:25:10.66:196,0,11	0/1:24,8:30:73.40:560,0,73	0/0:32,0:28:26.03:0,26,462	0/0:48,0:38:9.07:0,9,523	1/1:15,6:19:16.61:246,17,0	0/1:23,8:29:73.03:499,0,73	0/1:16,10:25:38.22:618,0,38	0/1:20,16:29:3.96:799,0,4	0/1:16,14:29:59.77:810,0,60	0/0:27,0:28:70.24:0,70,425	0/0:20,0:20:18.53:0,19,824	0/1:29,6:30:99:369,0,216	0/1:23,10:32:41.69:529,0,42	1/1:6,6:10:23.64:232,24,0	0/1:18,8:25:60.10:404,0,60	0/1:21,11:29:88.09:505,0,88	0/1:16,4:19:34.35:182,0,34	0/0:41,0:34:4.79:0,5,450	0/0:35,0:33:31.91:0,32,1586	0/1:20,19:35:4.02:898,0,4	0/1:17,0:17:59.79:60,0,625
chr10	99518632	.	A	AGAG	10139.05	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=5.054;DP=784;FS=18.845;HRun=0;HaplotypeScore=233.8834;InbreedingCoeff=0.9591;MQ=39.21;MQ0=21;MQRankSum=-9.692;QD=21.90;ReadPosRankSum=-1.186;VQSLOD=3.2506;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:14:17.12:194,17,0	1/1:12,0:12:17.97:239,18,0	0/0:35,0:12:32.88:0,33,310	0/0:24,0:6:12.92:0,13,147	0/0:51,0:46:84.15:0,84,1114	1/1:25,1:25:25.10:632,25,0	1/1:18,0:15:26.93:354,27,0	1/1:27,0:22:23.98:310,24,0	1/1:25,3:27:50.18:653,50,0	0/0:31,0:27:36.55:0,37,464	0/0:52,0:42:86.90:0,87,1017	1/1:21,0:19:21.01:292,21,0	1/1:28,3:30:56.85:717,57,0	1/1:27,1:27:56.94:758,57,0	1/1:35,0:28:72.01:1022,72,0	1/1:30,1:30:74.85:1046,75,0	0/0:28,0:28:75.22:0,75,1055	0/0:17,0:17:47.11:0,47,592	1/1:28,3:26:35.96:430,36,0	1/1:31,0:30:50.80:644,51,0	1/1:13,0:11:24:344,24,0	1/1:26,0:25:40.08:518,40,0	1/1:32,0:29:45.13:706,45,0	1/1:19,0:18:1.44:224,1,0	0/0:34,0:28:36.77:0,37,474	0/0:35,0:35:87.20:0,87,1121	1/1:38,0:34:72.08:1056,72,0	0/0:14,0:14:21.80:0,22,483
chr10	99518699	.	AAGG	A	14457.37	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=9.408;DP=633;FS=5.638;HRun=0;HaplotypeScore=147.5949;InbreedingCoeff=0.9789;MQ=54.20;MQ0=13;MQRankSum=-0.100;QD=30.12;ReadPosRankSum=2.394;VQSLOD=5.2847;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,28:31:46.79:718,47,0	1/1:7,0:6:18.06:268,18,0	0/0:30,0:11:9.13:0,9,113	0/0:27,0:14:15.81:0,16,279	1/1:9,26:33:54.09:743,54,0	1/1:4,15:18:33.11:487,33,0	1/1:23,0:22:55.02:767,55,0	1/1:23,0:23:41.87:529,42,0	1/1:18,0:18:36.09:500,36,0	1/1:3,16:18:48.14:691,48,0	1/1:3,19:22:39.13:578,39,0	1/1:12,0:12:30.08:429,30,0	1/1:19,0:19:51.17:758,51,0	1/1:29,0:29:69.23:1016,69,0	1/1:28,0:27:63.20:917,63,0	1/1:20,0:20:42.14:611,42,0	0/0:34,0:34:60.40:0,60,1563	0/0:22,0:22:48.64:0,49,933	1/1:14,0:13:33.11:490,33,0	1/1:15,0:14:42.06:554,42,0	1/1:33,0:32:81.27:1210,81,0	1/1:24,0:22:53.48:808,53,0	1/1:25,0:24:48.16:719,48,0	1/1:26,0:26:50.99:688,51,0	1/1:2,11:12:15.05:226,15,0	0/0:30,0:30:69.22:0,69,1336	1/1:24,0:23:51.17:751,51,0	0/0:9,0:9:18.06:0,18,362
chr10	99518709	.	AG	A	4795.47	PASS	AB=0.815;AC=32;AF=0.571;AN=56;BaseQRankSum=13.490;DP=648;FS=8.694;HRun=2;HaplotypeScore=157.8193;InbreedingCoeff=-0.0190;MQ=57.31;MQ0=17;MQRankSum=0.469;QD=8.95;ReadPosRankSum=8.674;VQSLOD=1.5218;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:35,1:35:35.26:35,0,66	0/1:6,4:9:17.81:107,0,18	0/0:22,1:5:9.87:0,10,96	0/1:26,0:17:20.26:20,0,303	0/1:32,0:30:9.56:60,0,10	0/1:20,0:20:13.82:14,0,76	1/1:12,14:25:25.13:308,25,0	0/1:19,6:24:49.89:283,0,50	0/1:6,11:17:19.75:145,0,20	0/1:21,0:20:33.35:81,0,33	0/1:23,0:23:15.22:15,0,130	1/1:4,10:14:30.35:203,30,0	0/1:6,16:22:17.60:294,0,18	1/1:8,20:28:16.23:380,16,0	0/1:8,21:28:9.82:367,0,10	1/1:6,12:18:41.12:275,41,0	0/0:34,0:34:76.05:0,76,1254	0/0:20,0:20:54.18:0,54,784	1/1:10,9:13:32.32:216,32,0	1/1:6,11:16:40.71:285,41,0	1/1:13,21:33:17.03:492,17,0	0/1:8,17:23:0.39:371,0,0	0/1:9,17:25:40.23:258,0,40	1/1:8,20:28:1.03:305,1,0	0/1:13,0:12:8.90:9,0,29	0/0:26,0:26:72.23:0,72,1048	1/1:9,16:24:3.16:272,3,0	0/0:8,0:8:24.08:0,24,349
chr10	99518714	.	AGG	A	6945.60	PASS	AB=0.963;AC=33;AF=0.589;AN=56;BaseQRankSum=6.676;DP=635;FS=2.764;HRun=2;HaplotypeScore=148.8459;InbreedingCoeff=0.8520;MQ=55.95;MQ0=19;MQRankSum=-4.234;QD=18.47;ReadPosRankSum=4.096;VQSLOD=2.9448;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:47.33:0,47,484	1/1:6,4:9:3.01:172,3,0	0/0:24,0:5:11.30:0,11,106	0/1:25,1:16:4.46:4,0,371	0/0:32,0:30:51.68:0,52,340	0/0:21,0:20:47.37:0,47,450	1/1:12,14:25:54.56:550,55,0	1/1:18,5:22:4.11:320,4,0	1/1:6,11:17:13.12:262,13,0	0/0:20,0:19:53.94:0,54,495	0/0:23,0:23:50.53:0,51,487	1/1:4,10:14:20.22:265,20,0	1/1:4,16:20:12.46:465,12,0	1/1:6,20:26:39.90:626,40,0	1/1:5,21:25:25.57:589,26,0	1/1:5,12:17:47.85:433,48,0	0/0:32,0:32:74.54:0,75,1659	0/0:19,0:19:54.18:0,54,1051	1/1:11,9:13:33.03:324,33,0	1/1:5,11:15:38.60:318,39,0	1/1:15,21:35:35.12:795,35,0	1/1:9,16:22:33.27:505,33,0	1/1:5,17:21:0.31:414,0,0	1/1:9,19:28:17.67:415,18,0	0/0:16,0:15:26.86:0,27,238	0/0:27,0:27:81.26:0,81,1465	1/1:8,16:23:31.88:488,32,0	0/0:8,0:8:24.08:0,24,457
chr10	99519856	.	T	TTTATTTA	18074.48	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-5.400;DP=493;FS=34.002;HRun=0;HaplotypeScore=105.5481;InbreedingCoeff=0.8655;MQ=62.47;MQ0=9;MQRankSum=-6.076;QD=42.13;ReadPosRankSum=4.993;VQSLOD=2.9257;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:43,0:42:98.70:1851,99,0	1/1:11,0:11:21.94:525,22,0	0/0:29,0:17:34.78:0,35,523	0/0:16,0:9:20.21:0,20,325	1/1:18,0:18:44.09:686,44,0	1/1:22,0:21:39.12:768,39,0	1/1:4,0:4:6.02:149,6,0	1/1:36,1:36:99:2251,103,0	1/1:8,0:8:6.02:106,6,0	1/1:20,0:19:44.78:775,45,0	1/1:27,0:27:60.11:1129,60,0	1/1:4,0:4:12.04:299,12,0	1/1:13,0:13:18.04:448,18,0	1/1:12,0:12:21.05:522,21,0	1/1:17,1:17:24.08:616,24,0	1/1:15,0:15:21.05:524,21,0	1/1:15,0:15:33.03:760,33,0	0/0:19,0:18:35.92:0,36,822	1/1:7,13:21:40.31:1016,40,0	1/1:23,0:23:39.02:765,39,0	1/1:9,0:9:12.04:295,12,0	1/1:10,0:11:20.97:381,21,0	1/1:17,0:16:18.98:582,19,0	1/1:8,0:7:5.99:149,6,0	1/1:25,0:24:30.05:591,30,0	1/1:3,9:11:30.10:963,30,0	1/1:22,1:23:47.77:1161,48,0	1/1:0,12:12:21.07:766,21,0
chr10	99519857	.	T	TTATTTA	20717.44	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-6.874;DP=503;FS=36.291;HRun=0;HaplotypeScore=89.9272;InbreedingCoeff=0.8734;MQ=61.63;MQ0=9;MQRankSum=-5.522;QD=47.09;ReadPosRankSum=4.668;VQSLOD=3.0146;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:42,1:42:99:2033,99,0	1/1:2,8:11:24.02:706,24,0	0/0:29,0:17:40.15:0,40,519	0/0:16,0:9:20.27:0,20,307	1/1:18,0:18:44.80:739,45,0	1/1:19,1:20:39.13:858,39,0	1/1:0,3:5:6.02:196,6,0	1/1:3,31:41:99:2815,123,0	1/1:0,6:9:6.02:152,6,0	1/1:19,0:18:41.82:800,42,0	1/1:26,1:27:60.11:1258,60,0	1/1:0,4:7:17.91:426,18,0	1/1:1,11:15:21.07:642,21,0	1/1:2,10:12:21.05:679,21,0	1/1:3,15:19:24.05:761,24,0	1/1:1,14:17:21.05:686,21,0	1/1:16,0:15:33.03:665,33,0	0/0:18,0:17:39.05:0,39,775	1/1:19,1:20:42:1114,42,0	1/1:1,20:24:38.99:946,39,0	1/1:0,8:10:12.04:358,12,0	1/1:1,8:10:20.72:450,21,0	1/1:4,13:17:18.95:767,19,0	1/1:4,4:8:5.96:196,6,0	1/1:22,0:21:30.10:644,30,0	1/1:12,1:11:30.10:776,30,0	1/1:3,16:21:47.68:1497,48,0	1/1:11,0:11:21.04:553,21,0
chr10	99519858	.	T	TTTTA	7103.53	PASS	AB=0.952;AC=45;AF=0.804;AN=56;BaseQRankSum=4.914;DP=485;FS=10.596;HRun=0;HaplotypeScore=118.9255;InbreedingCoeff=0.3770;MQ=59.84;MQ0=9;MQRankSum=-6.775;QD=16.79;ReadPosRankSum=8.700;VQSLOD=2.6557;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:43:90.79:1382,91,0	1/1:9,0:9:12.22:149,12,0	0/0:28,0:16:43.21:0,43,433	0/0:16,0:9:17.72:0,18,204	1/1:1,0:22:12.88:362,13,0	1/1:2,0:21:39.08:553,39,0	1/1:5,0:5:5.94:46,6,0	0/1:37,0:36:64.19:483,0,64	1/1:8,0:8:6:60,6,0	1/1:0,0:19:29.28:446,29,0	1/1:1,0:27:57.09:825,57,0	0/1:8,0:8:8.57:75,0,9	1/1:13,0:13:20.91:161,21,0	1/1:10,0:11:20.95:175,21,0	1/1:19,0:18:23.86:184,24,0	1/1:14,0:14:20.92:160,21,0	0/1:11,0:15:5.38:99,0,5	0/0:18,0:17:38.93:0,39,552	0/1:17,0:17:44.14:226,0,44	1/1:20,0:20:8.04:160,8,0	1/1:10,0:10:8.93:69,9,0	0/1:9,0:9:10.74:75,0,11	1/1:18,0:17:6.22:162,6,0	1/1:8,0:7:5.98:46,6,0	1/1:2,1:23:33.04:449,33,0	1/1:13,0:11:26.91:194,27,0	1/1:17,0:19:47.66:413,48,0	1/1:10,0:10:20.78:149,21,0
chr10	99519859	.	T	TTTATTTA	3769.82	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=6.925;DP=471;FS=9.005;HRun=0;HaplotypeScore=148.4961;InbreedingCoeff=0.2924;MQ=59.41;MQ0=9;MQRankSum=-5.737;QD=9.19;ReadPosRankSum=9.373;VQSLOD=0.3571;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:40:78.58:363,79,0	1/1:10,0:10:4.67:69,5,0	0/0:28,0:16:44.63:0,45,599	0/0:16,0:9:17.40:0,17,309	1/1:19,0:20:9.23:118,9,0	1/1:20,0:20:33.77:138,34,0	1/1:5,0:5:5.45:25,5,0	0/1:38,0:37:82.57:288,0,83	1/1:8,0:8:5.74:36,6,0	1/1:18,0:17:27.41:111,27,0	1/1:25,0:25:51:218,51,0	0/1:9,0:9:26.71:35,0,27	1/1:13,0:13:19.60:94,20,0	1/1:10,0:10:19.77:96,20,0	1/1:19,0:18:4.65:105,5,0	1/1:14,0:14:19.36:88,19,0	1/1:10,5:15:11.02:740,11,0	0/0:17,0:16:38.87:0,39,801	0/1:18,0:18:63.34:138,0,63	0/1:20,0:20:15.06:68,0,15	1/1:10,0:10:8.30:39,8,0	0/1:9,0:9:7.33:45,0,7	1/1:17,0:16:1.51:86,2,0	1/1:8,0:7:5.60:26,6,0	1/1:20,0:19:16.44:114,16,0	1/1:13,0:11:29.68:338,30,0	1/1:19,0:19:43.97:198,44,0	1/1:10,0:10:3.31:196,3,0
chr10	99520189	.	A	AG	25555.47	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-9.177;DP=648;FS=3.896;HRun=0;HaplotypeScore=51.8907;InbreedingCoeff=0.9968;MQ=80.53;MQ0=0;MQRankSum=-6.530;QD=43.39;ReadPosRankSum=3.680;VQSLOD=5.3467;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:72.25:1151,72,0	1/1:0,12:12:36.12:575,36,0	0/0:23,0:23:69.22:0,69,950	0/0:18,0:19:29.13:0,29,656	1/1:0,31:31:90.31:1436,90,0	1/1:0,27:27:69.24:1103,69,0	1/1:0,28:28:75.09:1197,75,0	1/1:2,27:29:81.26:1267,81,0	1/1:0,22:22:51.17:815,51,0	1/1:0,27:27:81.26:1265,81,0	1/1:1,21:22:51.17:814,51,0	1/1:0,16:16:45.15:719,45,0	1/1:0,26:26:75.26:1199,75,0	1/1:0,26:26:72.25:1151,72,0	1/1:0,25:25:72.25:1151,72,0	1/1:0,25:25:72.25:1151,72,0	1/1:1,28:29:69.23:1103,69,0	0/0:17,0:17:51.17:0,51,711	1/1:1,19:20:57.19:905,57,0	1/1:0,17:17:48.16:766,48,0	1/1:1,25:26:72.25:1150,72,0	1/1:0,26:26:69.24:1100,69,0	1/1:0,15:15:45.15:718,45,0	1/1:1,19:20:48.16:767,48,0	1/1:0,19:19:54.12:833,54,0	1/1:0,36:35:99:1639,105,0	1/1:2,31:33:81.28:1294,81,0	1/1:0,6:6:18.06:287,18,0
chr10	99520888	.	T	TCTAA	32948.06	PASS	AB=0.545;AC=41;AF=0.732;AN=56;BaseQRankSum=-15.134;DP=713;FS=0.000;HRun=0;HaplotypeScore=98.4385;InbreedingCoeff=0.9171;MQ=84.03;MQ0=0;MQRankSum=-6.111;QD=62.17;ReadPosRankSum=2.912;VQSLOD=6.8756;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:28:63.22:1650,63,0	0/1:3,14:18:9.30:996,0,9	0/0:20,0:20:48.16:0,48,825	0/0:30,0:30:81.24:0,81,1359	0/0:31,0:31:81.26:0,81,1436	1/1:3,26:30:66.23:1727,66,0	1/1:3,12:15:36.08:884,36,0	1/1:13,25:39:81.26:1996,81,0	1/1:2,26:30:72.25:1886,72,0	0/0:40,0:40:99:0,117,2116	0/0:20,0:20:54.19:0,54,975	1/1:1,21:23:63.22:1649,63,0	1/1:4,21:27:66.19:1631,66,0	1/1:3,20:24:60.21:1553,60,0	1/1:2,24:26:69.24:1807,69,0	1/1:3,24:29:72.25:1846,72,0	1/1:6,16:23:51.18:1335,51,0	0/0:14,0:14:39.13:0,39,709	1/1:3,9:13:20.53:830,21,0	1/1:4,27:31:81.28:1999,81,0	1/1:2,13:16:36.08:884,36,0	1/1:3,24:27:72.25:1838,72,0	1/1:4,29:34:93.23:2316,93,0	1/1:3,11:14:30.57:786,31,0	0/0:28,0:28:75.24:0,75,1333	1/1:4,26:32:32.72:2078,33,0	1/1:3,34:39:95.94:2474,96,0	1/1:1,10:11:30.10:785,30,0
chr10	99522053	.	T	TGTAA	5363.23	PASS	AB=0.800;AC=11;AF=0.196;AN=56;BaseQRankSum=11.222;DP=599;FS=0.398;HRun=0;HaplotypeScore=148.9487;InbreedingCoeff=0.9394;MQ=78.40;MQ0=0;MQRankSum=-11.101;QD=40.33;ReadPosRankSum=-2.077;VQSLOD=4.7982;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.16:0,78,1456	0/0:15,0:15:45.11:0,45,864	0/0:19,0:20:54.17:0,54,994	0/0:13,0:13:32.83:0,33,481	1/1:6,18:31:67.72:1268,68,0	0/0:27,0:27:78.25:0,78,1587	0/0:12,0:12:36.11:0,36,701	0/0:20,0:20:60.12:0,60,1134	0/0:18,0:18:54.19:0,54,1120	1/1:11,16:29:63.64:1306,64,0	1/1:7,11:20:37.22:965,37,0	0/0:27,0:27:81.26:0,81,1627	0/0:19,0:19:57.20:0,57,1179	0/0:20,0:20:60.19:0,60,1207	0/0:29,0:29:87.30:0,87,1778	0/0:21,0:21:63.20:0,63,1280	0/0:36,0:36:97.55:0,98,1022	0/0:20,0:20:57.07:0,57,1089	0/0:16,0:16:48.15:0,48,940	0/0:20,0:20:60.21:0,60,1179	0/0:15,0:15:45.15:0,45,928	0/0:21,0:21:63.22:0,63,1288	0/0:23,0:23:69.22:0,69,1386	0/0:20,0:20:57.15:0,57,1129	1/1:10,9:26:46.47:948,46,0	1/1:11,1:23:51.96:832,52,0	0/0:28,0:28:84.20:0,84,1557	0/1:3,0:4:0.89:44,0,1
chr10	99522539	.	AC	A	9387.45	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=5.741;DP=551;FS=1.439;HRun=3;HaplotypeScore=67.3433;InbreedingCoeff=0.9947;MQ=88.79;MQ0=0;MQRankSum=-1.942;QD=31.61;ReadPosRankSum=1.731;VQSLOD=5.1520;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,1643	1/1:1,8:9:27.02:314,27,0	0/0:22,0:22:56.70:0,57,714	0/0:21,0:21:12.88:0,13,573	0/0:21,0:21:63.12:0,63,834	0/0:22,0:22:63.19:0,63,888	1/1:0,19:19:48.15:595,48,0	1/1:1,17:18:51.12:596,51,0	1/1:1,16:17:42.13:517,42,0	0/0:14,0:14:36.11:0,36,486	0/0:23,0:23:63.16:0,63,882	1/1:1,13:14:36.11:446,36,0	1/1:1,13:14:30.09:372,30,0	1/1:1,21:22:54.17:669,54,0	1/1:2,17:19:39.11:474,39,0	1/1:1,20:21:51.16:632,51,0	0/0:29,0:29:81.27:0,81,1163	0/0:17,0:17:48.08:0,48,647	1/1:1,18:19:54.14:629,54,0	1/1:0,17:17:48.15:593,48,0	1/1:0,21:21:54.17:669,54,0	1/1:0,9:9:24.03:280,24,0	1/1:0,28:28:75.24:929,75,0	1/1:1,27:28:75.24:929,75,0	0/0:15,0:15:39.13:0,39,561	0/0:22,0:22:66.22:0,66,950	1/1:0,22:22:60.19:744,60,0	0/0:6,0:6:18.02:0,18,235
chr10	99522763	.	AT	A	4975.72	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.047;DP=553;FS=3.334;HRun=1;HaplotypeScore=69.9875;InbreedingCoeff=0.9953;MQ=82.34;MQ0=2;MQRankSum=-4.265;QD=40.45;ReadPosRankSum=1.485;VQSLOD=5.5767;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:60.20:0,60,933	0/0:7,0:7:21.07:0,21,327	0/0:23,0:23:69.23:0,69,1078	0/0:10,0:10:30.10:0,30,456	1/1:0,42:42:99:1653,120,0	0/0:23,0:22:69.22:0,69,1057	0/0:13,0:13:36.12:0,36,561	0/0:32,0:32:96.32:0,96,1480	0/0:14,0:14:42.14:0,42,657	1/1:0,35:35:99:1446,105,0	1/1:1,28:29:87.20:1169,87,0	0/0:14,0:14:33.11:0,33,516	0/0:11,0:11:33.09:0,33,472	0/0:13,0:12:27.08:0,27,400	0/0:16,0:16:36.12:0,36,542	0/0:14,0:14:39.12:0,39,588	0/0:23,0:23:60.18:0,60,910	0/0:24,0:24:69.14:0,69,989	0/0:15,0:15:42.14:0,42,647	0/0:22,0:21:60.15:0,60,886	0/0:17,0:17:39.09:0,39,583	0/0:23,0:23:69.23:0,69,1075	0/0:12,0:12:20.97:0,21,326	0/0:10,0:10:20.99:0,21,294	1/1:0,17:17:51.17:708,51,0	0/0:31,0:31:93.31:0,93,1432	0/0:30,0:29:69.12:0,69,1079	0/0:8,0:8:24.08:0,24,375
chr10	99522802	.	C	CAA	7657.04	PASS	AB=0.731;AC=39;AF=0.696;AN=56;BaseQRankSum=-2.554;DP=613;FS=11.408;HRun=13;HaplotypeScore=122.9386;InbreedingCoeff=0.6646;MQ=72.48;MQ0=3;MQRankSum=-1.770;QD=16.68;ReadPosRankSum=-5.803;VQSLOD=0.9109;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:24:43.16:0,43,183	1/1:0,2:6:9.02:98,9,0	0/0:22,0:18:12.48:0,12,90	0/1:10,0:10:2.18:15,0,2	1/1:18,1:26:42.08:445,42,0	0/0:5,0:18:35.63:0,36,153	1/1:3,10:15:29.54:354,30,0	1/1:20,20:43:75.94:924,76,0	1/1:0,9:9:24.08:326,24,0	1/1:31,1:35:57.09:603,57,0	1/1:31,0:40:72.06:706,72,0	1/1:4,15:21:17.38:200,17,0	0/1:4,8:12:3.64:194,0,4	1/1:4,15:18:21.07:285,21,0	0/1:6,12:19:2.87:230,0,3	1/1:6,9:16:14.78:203,15,0	0/0:4,0:29:57.82:0,58,262	0/0:28,0:28:62.67:0,63,549	1/1:11,11:27:32.19:545,32,0	1/1:10,16:29:58.31:643,58,0	1/1:7,7:18:23.04:246,23,0	1/1:4,13:20:47.52:551,48,0	1/1:5,0:22:33.88:317,34,0	0/1:1,3:12:0.85:79,0,1	1/1:17,0:25:48.08:491,48,0	0/0:27,0:31:19.20:0,19,355	1/1:7,13:22:15.04:176,15,0	0/1:9,1:11:26.17:26,0,76
chr10	99524570	.	A	AG	754.43	PASS	AB=0.876;AC=12;AF=0.214;AN=56;BaseQRankSum=5.950;DP=745;FS=33.444;HRun=0;HaplotypeScore=248.7150;InbreedingCoeff=-0.3272;MQ=61.13;MQ0=19;MQRankSum=-6.057;QD=2.76;ReadPosRankSum=-5.380;VQSLOD=1.3129;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:22:39.60:0,40,463	0/1:7,2:9:29.45:29,0,178	0/0:68,0:28:61.49:0,61,930	0/0:98,0:31:51.55:0,52,760	0/0:20,7:27:5.17:0,5,323	0/1:33,0:33:22.94:23,0,621	0/0:18,4:21:6.76:0,7,478	0/1:29,0:24:99:100,0,525	0/0:19,3:20:48.06:0,48,579	0/1:22,4:25:99:226,0,521	0/1:13,7:21:10.93:11,0,307	0/0:17,5:20:0.16:0,0,347	0/1:17,4:19:31.88:32,0,353	0/0:23,1:22:7.56:0,8,430	0/0:21,7:29:19.14:0,19,587	0/1:12,2:14:2.92:3,0,320	0/0:25,1:26:17.70:0,18,691	0/0:12,0:12:33.11:0,33,461	0/1:14,0:14:36.79:37,0,298	0/0:25,4:26:0.02:0,0,558	0/0:14,0:13:7.69:0,8,152	0/0:18,7:25:6:0,6,337	0/1:19,6:24:34.70:35,0,409	0/1:22,2:24:19.27:19,0,246	0/0:21,2:22:5.89:0,6,550	0/1:31,4:35:99:195,0,734	0/1:15,7:22:99:185,0,391	0/0:5,0:5:9.03:0,9,110
chr10	99524598	.	A	AG	4878.84	PASS	AB=0.762;AC=26;AF=0.464;AN=56;BaseQRankSum=5.303;DP=727;FS=5.915;HRun=1;HaplotypeScore=209.1948;InbreedingCoeff=-0.8352;MQ=45.48;MQ0=26;MQRankSum=-4.460;QD=8.48;ReadPosRankSum=3.196;VQSLOD=2.5179;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,4:19:99:286,0,141	0/1:8,3:12:51.32:51,0,202	0/0:54,0:12:25.06:0,25,297	0/0:97,0:22:20.52:0,21,358	0/1:17,7:23:55.88:56,0,174	0/1:22,5:28:99:327,0,242	0/1:19,8:26:99:178,0,372	0/1:25,11:31:99:364,0,519	0/1:11,8:16:99:192,0,114	0/1:16,9:23:99:259,0,445	0/1:17,5:22:99:125,0,318	0/1:18,8:24:99:124,0,398	0/1:13,10:21:99:259,0,254	0/1:12,12:22:99:256,0,175	0/1:12,12:24:99:292,0,134	0/1:14,4:18:83.09:83,0,260	0/1:14,10:24:99:244,0,270	0/1:8,1:9:63.32:63,0,181	0/1:12,3:15:99:188,0,262	0/1:16,5:16:99:190,0,152	0/1:14,2:15:15.71:16,0,220	0/1:16,8:24:0.01:0,0,308	0/1:14,8:21:99:269,0,182	0/1:20,6:26:99:115,0,184	0/1:12,9:20:98.32:98,0,206	0/1:22,11:33:99:536,0,499	0/1:20,7:27:99:223,0,510	0/1:2,3:5:68.02:80,0,68
chr10	99524605	.	A	AG	2295.48	PASS	AB=0.895;AC=22;AF=0.393;AN=56;BaseQRankSum=8.388;DP=711;FS=0.408;HRun=1;HaplotypeScore=211.1444;InbreedingCoeff=-0.6902;MQ=49.97;MQ0=21;MQRankSum=-6.482;QD=4.68;ReadPosRankSum=-0.908;VQSLOD=-0.4480;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:19:66.97:67,0,276	0/1:10,2:12:54.88:55,0,211	0/0:51,0:14:31:0,31,345	0/0:85,1:23:18.07:0,18,369	0/0:23,2:24:15.27:0,15,404	0/1:28,0:27:65.56:66,0,484	0/1:23,6:28:99:99,0,500	0/1:33,1:31:86.23:86,0,723	0/1:15,4:16:99:137,0,149	0/1:20,2:21:99:121,0,559	0/1:20,2:22:53.47:53,0,460	0/1:22,3:24:67.68:68,0,516	0/1:20,5:23:99:199,0,382	0/1:19,4:21:99:129,0,252	0/1:24,2:26:99:175,0,398	0/0:16,1:17:1.83:0,2,413	0/1:22,4:26:99:195,0,387	0/1:8,0:8:20.08:20,0,263	0/1:14,1:15:99:114,0,358	0/1:16,3:14:99:145,0,201	0/0:16,1:16:7.95:0,8,289	0/0:22,2:24:3.68:0,4,536	0/1:15,4:18:99:136,0,324	0/1:25,1:26:42.21:42,0,310	0/1:21,2:22:30.18:30,0,327	0/1:28,4:32:99:310,0,647	0/1:26,4:30:99:128,0,686	0/1:3,2:5:71.62:74,0,72
chr10	99524935	.	GTA	G	6051.08	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=9.847;DP=302;FS=5.009;HRun=0;HaplotypeScore=40.0078;InbreedingCoeff=0.8097;MQ=78.24;MQ0=0;MQRankSum=-0.411;QD=28.14;ReadPosRankSum=1.234;VQSLOD=5.6186;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:10:24.08:312,24,0	1/1:1,10:11:24.08:312,24,0	0/0:5,0:5:6:0,6,75	0/1:13,0:11:0.48:0,0,102	0/0:15,0:15:30.08:0,30,482	1/1:0,15:15:33.11:429,33,0	1/1:0,4:4:6.02:78,6,0	1/1:7,32:39:99:1266,99,0	1/1:0,1:1:3.01:39,3,0	0/0:8,0:8:21.06:0,21,333	0/0:14,0:14:36.11:0,36,580	1/1:2,9:11:24.08:312,24,0	1/1:0,6:6:15.05:195,15,0	1/1:0,4:4:9.03:117,9,0	1/1:1,5:6:15.05:195,15,0	1/1:2,9:11:27.09:351,27,0	1/1:0,25:25:54.18:701,54,0	0/0:7,0:7:18.06:0,18,306	1/1:0,16:16:48.14:610,48,0	1/1:1,12:12:27.01:314,27,0	1/1:1,3:4:9.03:117,9,0	1/1:0,1:1:3.01:39,3,0	1/1:1,5:6:8.74:117,9,0	1/1:0,1:1:3.01:39,3,0	0/0:17,0:17:45.15:0,45,765	0/0:11,0:11:27.09:0,27,430	1/1:1,17:18:39.02:507,39,0	0/0:10,0:10:21.07:0,21,340
chr10	99528824	.	T	TGTGACTGATAGGGTGGAGGA	92308.45	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-2.982;DP=795;FS=8.673;HRun=0;HaplotypeScore=293.1349;InbreedingCoeff=0.9761;MQ=74.11;MQ0=0;MQRankSum=-12.572;QD=127.50;ReadPosRankSum=4.401;VQSLOD=3.5353;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:22:33.11:2649,33,0	1/1:13,0:19:36.12:2582,36,0	0/0:27,0:27:69.02:0,69,3266	0/0:29,0:29:71.40:0,71,3106	1/1:24,0:29:57.20:3525,57,0	1/1:14,0:37:69.24:5568,69,0	1/1:10,0:38:48.16:3607,48,0	1/1:32,0:32:93.31:4412,93,0	1/1:8,0:34:60.21:4960,60,0	1/1:9,0:31:75.19:4878,75,0	1/1:8,0:19:36.12:3059,36,0	1/1:10,0:26:42.14:3179,42,0	1/1:23,0:50:96.22:7558,96,0	1/1:9,0:24:36.12:3025,36,0	1/1:10,0:37:56.88:4382,57,0	1/1:15,0:42:62.81:4742,63,0	1/1:9,0:29:42.14:3168,42,0	0/0:15,0:15:45.14:0,45,2354	1/1:10,0:25:75.25:3646,75,0	1/1:8,0:25:48.16:3428,48,0	1/1:7,0:19:18.06:1178,18,0	1/1:5,1:17:27.09:2039,27,0	1/1:6,0:21:36.12:2572,36,0	1/1:7,0:31:36.12:2744,36,0	1/1:10,0:39:66.18:5308,66,0	1/1:13,0:30:81.26:4954,81,0	1/1:16,0:38:66.23:4357,66,0	1/1:1,0:8:9.03:788,9,0
chr10	99529435	.	GA	G	12117.70	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=12.612;DP=626;FS=6.645;HRun=6;HaplotypeScore=59.7076;InbreedingCoeff=0.9884;MQ=77.61;MQ0=0;MQRankSum=-1.468;QD=27.42;ReadPosRankSum=1.886;VQSLOD=5.5378;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:32:78.19:838,78,0	1/1:2,10:12:27.07:288,27,0	0/0:16,0:16:33.05:0,33,399	0/0:14,0:14:8.06:0,8,318	0/0:33,0:33:96.31:0,96,1263	1/1:2,16:18:39.10:419,39,0	1/1:2,13:15:36.09:387,36,0	1/1:6,30:36:90.21:958,90,0	1/1:2,20:22:57.14:612,57,0	0/0:29,0:29:75.24:0,75,987	0/0:20,0:19:54.18:0,54,710	1/1:1,20:21:60.15:645,60,0	1/1:1,18:19:48.12:516,48,0	1/1:2,16:18:42.11:451,42,0	1/1:1,16:17:48.12:516,48,0	1/1:2,29:31:84.21:903,84,0	1/1:2,28:30:78.20:838,78,0	0/0:15,0:15:39.13:0,39,510	1/1:2,22:24:66.12:686,66,0	1/1:1,30:31:90.23:967,90,0	1/1:0,13:13:33.08:355,33,0	1/1:1,29:30:84.21:899,84,0	1/1:1,23:24:60.01:645,60,0	1/1:0,19:19:39.10:419,39,0	0/0:18,0:18:54.18:0,54,710	0/0:30,0:30:87.27:0,87,1132	1/1:0,30:30:72.18:774,72,0	0/0:9,0:9:27.09:0,27,354
chr10	99530092	.	CACACAT	C	3178.94	PASS	AB=0.990;AC=38;AF=0.679;AN=56;BaseQRankSum=-0.486;DP=663;FS=4.646;HRun=0;HaplotypeScore=153.7163;InbreedingCoeff=-0.1716;MQ=48.39;MQ0=31;MQRankSum=5.721;QD=5.52;ReadPosRankSum=-4.893;VQSLOD=0.8235;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:32:54.68:190,0,55	0/1:5,1:6:1.96:39,0,2	1/1:41,0:2:1.25:3,1,0	0/0:55,0:6:1.38:0,1,60	0/0:32,0:28:3.01:0,3,66	0/1:20,0:20:49.89:118,0,50	1/1:19,1:20:14.28:157,14,0	0/1:33,0:30:85.44:199,0,85	1/1:13,1:12:13.26:187,13,0	0/1:21,0:20:75.50:75,0,232	0/1:19,0:18:24.29:239,0,24	1/1:3,12:15:8.86:103,9,0	1/1:15,0:15:4.21:22,4,0	1/1:9,17:26:3.92:71,4,0	1/1:20,1:21:9.48:133,9,0	1/1:20,1:21:13.74:275,14,0	1/1:33,1:33:11.43:493,11,0	0/1:21,0:22:8.24:8,0,514	0/1:18,0:17:30.17:157,0,30	0/1:21,0:21:0:0,0,0	0/1:33,0:31:34.26:285,0,34	1/1:18,0:17:2.99:23,3,0	0/1:12,0:12:0.01:0,0,0	1/1:29,0:29:2.57:23,3,0	0/1:21,0:18:2.81:145,0,3	0/1:27,0:27:83.62:283,0,84	1/1:4,19:23:3.23:27,3,0	0/1:12,0:12:44.18:64,0,44
chr10	99530094	.	CACAT	C	3943.75	PASS	AB=0.919;AC=40;AF=0.714;AN=56;BaseQRankSum=0.312;DP=671;FS=4.028;HRun=0;HaplotypeScore=141.5019;InbreedingCoeff=0.0237;MQ=48.26;MQ0=30;MQRankSum=6.392;QD=7.08;ReadPosRankSum=-3.635;VQSLOD=1.3334;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:33:18.31:212,0,18	1/1:6,0:6:8.93:73,9,0	1/1:45,0:1:2.37:8,2,0	0/0:58,0:6:1.23:0,1,60	0/0:33,0:29:3.01:0,3,40	0/1:21,0:21:1.54:163,0,2	1/1:19,1:20:23.75:191,24,0	0/1:31,0:29:81.85:222,0,82	1/1:12,2:12:9.63:217,10,0	0/1:20,0:19:90.41:90,0,119	1/1:19,0:18:15.07:254,15,0	1/1:13,2:15:9.03:147,9,0	1/1:2,13:15:5.97:75,6,0	1/1:24,1:26:3.81:39,4,0	1/1:5,15:20:8.97:103,9,0	1/1:21,0:21:41.64:352,42,0	0/1:34,0:33:1.79:429,0,2	0/0:23,0:23:1.28:0,1,376	0/1:9,9:17:28.90:231,0,29	0/1:21,0:21:0:0,0,0	1/1:32,0:30:19.08:347,19,0	1/1:4,14:17:3.01:57,3,0	0/1:1,12:13:0:0,0,1	1/1:4,25:29:2.69:57,3,0	1/1:22,0:19:28.66:246,29,0	0/1:27,0:27:22.93:300,0,23	1/1:22,1:23:3.47:65,3,0	0/1:12,0:12:28.59:67,0,29
chr10	99530096	.	CAT	C	3976.18	PASS	AB=0.834;AC=46;AF=0.821;AN=56;BaseQRankSum=2.237;DP=669;FS=4.475;HRun=0;HaplotypeScore=129.4151;InbreedingCoeff=0.1337;MQ=48.23;MQ0=28;MQRankSum=7.475;QD=6.90;ReadPosRankSum=-2.061;VQSLOD=2.5556;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:33:31.62:287,32,0	1/1:7,0:7:11.88:98,12,0	1/1:49,0:1:2.50:9,2,0	0/0:59,0:6:1.13:0,1,59	0/0:12,21:29:2.84:0,3,14	1/1:20,0:20:22.28:192,22,0	1/1:21,0:21:26.67:210,27,0	0/1:14,15:27:82.60:222,0,83	1/1:14,0:12:26.76:206,27,0	0/1:16,4:19:61.98:146,0,62	1/1:19,0:18:35.46:278,35,0	1/1:15,0:15:8.97:70,9,0	1/1:14,0:14:5.95:44,6,0	1/1:25,0:25:3.73:25,4,0	1/1:18,1:19:7.53:44,8,0	1/1:22,0:22:40.30:357,40,0	1/1:32,2:33:0.17:437,0,0	0/1:21,0:21:22.87:23,0,270	0/1:18,0:17:37.47:181,0,37	0/1:1,20:21:0:0,0,0	1/1:32,0:30:45.33:390,45,0	1/1:18,0:17:3:25,3,0	0/1:13,0:13:0:0,0,1	1/1:29,0:29:2.79:26,3,0	1/1:22,0:19:28.41:246,28,0	1/1:4,22:26:39.22:345,39,0	1/1:21,0:21:3.60:34,4,0	1/1:12,0:12:7.36:82,7,0
chr10	99530459	.	CAT	C	388.07	PASS	AB=0.905;AC=11;AF=0.239;AN=46;BaseQRankSum=5.919;DP=269;FS=0.861;HRun=0;HaplotypeScore=54.4757;InbreedingCoeff=0.1017;MQ=69.40;MQ0=6;MQRankSum=1.116;QD=3.08;ReadPosRankSum=-0.685;VQSLOD=1.6443;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:5.69:0,6,31	0/0:4,0:4:12.04:0,12,188	0/0:13,0:5:0.47:0,0,1	0/0:30,0:10:4.25:0,4,37	0/1:5,2:7:52.61:53,0,82	0/1:22,0:22:0:0,0,0	0/0:3,0:3:6.02:0,6,96	0/1:34,6:41:99:141,0,952	1/1:2,6:9:17.89:194,18,0	0/1:9,1:10:20.93:21,0,176	0/0:4,0:4:1.56:0,2,89	0/1:5,0:5:1.85:2,0,171	./.	1/1:2,4:6:6.02:70,6,0	0/0:4,0:4:3.01:0,3,48	0/0:3,0:3:6.02:0,6,96	0/1:8,1:9:11.96:12,0,255	0/1:15,2:17:23.75:24,0,621	0/0:8,0:7:15.05:0,15,240	0/0:7,0:7:13.73:0,14,238	./.	./.	0/0:2,0:2:6.02:0,6,96	0/0:3,0:3:9.03:0,9,144	0/0:13,0:13:18.88:0,19,400	./.	0/0:14,0:14:36.10:0,36,549	./.
chr10	99530653	.	GA	G	5274.41	PASS	AB=0.600;AC=37;AF=0.661;AN=56;BaseQRankSum=4.691;DP=401;FS=9.953;HRun=10;HaplotypeScore=46.2331;InbreedingCoeff=0.8523;MQ=78.96;MQ0=1;MQRankSum=0.034;QD=19.98;ReadPosRankSum=2.294;VQSLOD=5.2603;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.05:0,42,440	1/1:0,4:4:12:104,12,0	0/0:8,0:7:5.37:0,5,33	0/0:15,1:15:4.80:0,5,157	0/0:20,0:20:54.05:0,54,563	0/0:18,0:18:45.12:0,45,497	1/1:3,12:15:26.99:234,27,0	1/1:9,22:31:17.97:508,18,0	1/1:2,14:16:35.99:313,36,0	0/0:9,0:9:15.04:0,15,166	0/0:12,0:12:27.07:0,27,298	1/1:2,14:16:35.98:313,36,0	1/1:0,12:12:26.99:234,27,0	1/1:0,12:13:32.03:266,32,0	1/1:3,15:18:38.99:339,39,0	1/1:1,13:14:38.98:339,39,0	1/1:1,15:16:35.98:313,36,0	0/0:17,1:17:8.42:0,8,455	1/1:4,14:18:14.79:354,15,0	1/1:1,10:11:26.97:234,27,0	1/1:2,14:16:38.99:339,39,0	1/1:3,5:8:14.99:130,15,0	1/1:1,13:14:35.99:312,36,0	1/1:0,14:14:41.99:365,42,0	0/0:18,0:19:50.97:0,51,545	0/1:3,6:9:12.18:135,0,12	1/1:1,15:16:41.99:365,42,0	1/1:0,3:3:9:78,9,0
chr10	99530805	.	T	TA	1978.85	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-2.874;DP=484;FS=4.452;HRun=9;HaplotypeScore=78.9763;InbreedingCoeff=0.9381;MQ=86.37;MQ0=1;MQRankSum=-0.296;QD=21.75;ReadPosRankSum=1.458;VQSLOD=4.5325;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,21:26:45.12:498,45,0	0/0:4,0:4:11.97:0,12,98	0/0:32,0:29:5.98:0,6,200	0/0:23,0:18:25.09:0,25,268	1/1:1,10:11:3.99:259,4,0	1/1:1,10:11:27.07:299,27,0	0/0:22,0:22:53.98:0,54,469	0/0:25,0:25:50.95:0,51,441	0/0:15,0:15:44.01:0,44,367	1/1:5,14:19:45.12:493,45,0	1/1:3,11:14:33.04:345,33,0	0/0:21,0:22:59.02:0,59,501	0/0:16,0:16:47.98:0,48,414	0/0:14,0:14:38.98:0,39,339	0/0:23,0:23:56.93:0,57,488	0/0:15,0:15:44.99:0,45,390	0/0:31,0:31:80.96:0,81,698	0/0:11,0:11:32.03:0,32,266	0/0:23,0:23:59.96:0,60,515	0/0:13,0:13:32.99:0,33,287	0/0:15,0:15:38.99:0,39,338	0/0:11,0:11:26.98:0,27,234	0/0:10,0:10:26.99:0,27,234	0/0:9,0:9:26.99:0,27,234	1/1:0,10:10:24.06:266,24,0	0/0:19,2:21:23.78:0,24,432	0/0:30,0:30:71.94:0,72,625	0/0:7,0:7:18:0,18,156
chr10	99531402	.	AAT	A	3093.38	PASS	AB=1.000;AC=32;AF=0.667;AN=48;BaseQRankSum=3.881;DP=160;FS=2.571;HRun=0;HaplotypeScore=32.5580;InbreedingCoeff=0.5169;MQ=102.42;MQ0=0;MQRankSum=0.405;QD=23.80;ReadPosRankSum=1.137;VQSLOD=3.5640;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:4:12.04:165,12,0	1/1:0,3:3:9.03:124,9,0	0/1:15,0:10:4.79:5,0,53	0/1:24,0:14:37.82:38,0,108	0/0:1,0:1:3:0,3,25	1/1:1,2:3:6.02:82,6,0	./.	1/1:2,30:32:90.25:1170,90,0	1/1:0,2:2:6.02:82,6,0	0/0:2,0:2:6.02:0,6,107	0/0:3,0:3:6.02:0,6,106	1/1:2,4:6:12.04:165,12,0	1/1:0,2:2:3.01:41,3,0	1/1:1,1:2:3.01:41,3,0	1/1:0,1:1:3.01:41,3,0	1/1:0,3:3:9.03:124,9,0	1/1:0,17:17:42.14:577,42,0	0/0:16,0:16:45.11:0,45,765	1/1:0,5:5:15.05:206,15,0	1/1:1,5:6:15.02:186,15,0	./.	./.	./.	1/1:0,2:2:6.02:82,6,0	0/0:1,0:1:3.01:0,3,53	0/0:2,0:2:3.01:0,3,53	1/1:0,3:3:9.03:124,9,0	0/0:5,0:5:15.03:0,15,236
chr10	99532349	.	AAG	A	1544.77	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.079;DP=678;FS=2.924;HRun=0;HaplotypeScore=76.7769;InbreedingCoeff=0.9898;MQ=89.34;MQ0=1;MQRankSum=-2.433;QD=33.58;ReadPosRankSum=2.508;VQSLOD=6.0341;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:23:63.21:897,63,0	0/0:7,0:7:21.05:0,21,351	0/0:27,0:27:78.15:0,78,1330	0/0:25,0:25:66.15:0,66,1071	0/0:35,0:35:99:0,105,1874	1/1:0,22:22:54.18:769,54,0	0/0:27,0:27:81.23:0,81,1380	0/0:33,0:33:93.32:0,93,1647	0/0:15,0:15:39.12:0,39,679	0/0:21,0:21:63.21:0,63,1115	0/0:24,0:24:66.23:0,66,1198	0/0:28,0:28:84.29:0,84,1524	0/0:35,0:35:99:0,102,1825	0/0:22,0:22:66.21:0,66,1162	0/0:26,0:26:78.23:0,78,1318	0/0:23,0:23:69.24:0,69,1243	0/0:23,0:23:66.22:0,66,1169	0/0:25,0:25:72.20:0,72,1262	0/0:21,0:21:63.18:0,63,1009	0/0:43,0:43:99:0,129,2305	0/0:22,0:22:63.19:0,63,1079	0/0:18,0:18:51.15:0,51,853	0/0:28,0:28:84.26:0,84,1446	0/0:22,0:22:63.22:0,63,1131	0/0:20,0:20:54.17:0,54,951	0/0:26,0:26:75.25:0,75,1323	0/0:31,0:31:87.26:0,87,1518	0/0:5,0:5:15.05:0,15,272
chr10	99533513	.	GTATA	G	4119.85	PASS	AB=0.611;AC=31;AF=0.596;AN=52;BaseQRankSum=-4.867;DP=222;FS=6.185;HRun=0;HaplotypeScore=45.5963;InbreedingCoeff=0.6464;MQ=74.72;MQ0=0;MQRankSum=0.111;QD=26.75;ReadPosRankSum=2.282;VQSLOD=2.0783;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,5:7:12.04:177,12,0	0/0:6,0:5:0.89:0,1,3	0/0:13,0:8:4.63:0,5,16	0/0:4,0:7:6.02:0,6,106	0/0:3,0:6:5.75:0,6,65	1/1:3,3:6:6.02:101,6,0	1/1:15,17:32:45.07:641,45,0	1/1:2,1:3:3.01:51,3,0	0/0:5,0:9:5.95:0,6,71	0/0:1,0:3:5.91:0,6,68	1/1:1,6:7:18.06:304,18,0	1/1:2,7:9:15.05:253,15,0	1/1:3,4:7:12.51:203,13,0	1/1:3,8:11:21.07:341,21,0	1/1:3,11:13:30.07:495,30,0	1/1:8,0:9:6.01:56,6,0	0/0:6,0:6:6.02:0,6,149	1/1:5,5:10:12.04:202,12,0	1/1:1,4:5:12.04:202,12,0	0/1:4,5:11:4.42:233,0,4	1/1:0,3:3:6.02:88,6,0	./.	1/1:1,1:2:3.01:51,3,0	0/0:5,0:7:6.02:0,6,106	0/0:5,0:5:15.03:0,15,210	1/1:2,15:17:45.15:723,45,0	0/0:5,0:5:6.02:0,6,118
chr10	99534536	.	A	AT	26132.81	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=2.700;DP=672;FS=24.520;HRun=0;HaplotypeScore=112.8697;InbreedingCoeff=0.9962;MQ=83.97;MQ0=0;MQRankSum=-6.306;QD=43.85;ReadPosRankSum=4.155;VQSLOD=2.7174;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:38:99:1678,105,0	1/1:1,13:14:39.13:623,39,0	0/0:21,0:21:58.38:0,58,748	0/0:18,0:18:49.30:0,49,646	1/1:0,23:23:66.23:1054,66,0	1/1:1,20:21:54.18:863,54,0	1/1:0,18:18:48.16:767,48,0	1/1:0,27:27:81.24:1224,81,0	1/1:0,27:27:75.26:1199,75,0	1/1:0,27:27:81.28:1296,81,0	1/1:0,23:23:63.21:1007,63,0	1/1:0,24:24:66.23:1055,66,0	1/1:0,21:21:60.20:959,60,0	1/1:0,29:29:78.27:1246,78,0	1/1:2,23:25:63.21:1007,63,0	1/1:0,21:21:60.20:959,60,0	1/1:3,32:35:87.30:1389,87,0	0/0:12,0:12:33.09:0,33,442	1/1:1,21:22:66.19:987,66,0	1/1:2,38:40:99:1676,105,0	1/1:0,30:30:90.31:1439,90,0	1/1:1,24:25:66.23:1054,66,0	1/1:1,17:18:45.15:719,45,0	1/1:0,17:17:48.16:767,48,0	1/1:0,25:25:66.23:1055,66,0	0/0:20,0:20:57.19:0,57,797	1/1:1,45:46:99:2109,132,0	0/0:5,0:5:15.05:0,15,210
chr10	99534966	.	GC	G	18939.08	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=1.599;DP=550;FS=7.929;HRun=1;HaplotypeScore=77.1761;InbreedingCoeff=0.9945;MQ=72.57;MQ0=0;MQRankSum=-0.934;QD=40.30;ReadPosRankSum=1.726;VQSLOD=5.3531;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.21:0,63,1005	1/1:0,17:17:51.17:708,51,0	0/0:13,0:13:38.67:0,39,407	0/0:11,0:11:21.06:0,21,265	1/1:0,33:33:93.31:1301,93,0	0/0:25,0:25:75.26:0,75,1198	1/1:0,23:23:66.22:923,66,0	1/1:0,40:40:99:1601,117,0	1/1:0,15:15:45.15:629,45,0	1/1:0,25:25:75.24:1032,75,0	1/1:0,24:24:69.23:959,69,0	1/1:0,15:15:42.14:586,42,0	1/1:0,10:10:30.10:420,30,0	1/1:0,21:21:60.20:833,60,0	1/1:0,17:17:51.17:713,51,0	1/1:0,24:24:69.23:965,69,0	1/1:0,26:25:75.25:1048,75,0	0/0:9,0:9:27.09:0,27,431	1/1:0,18:18:54.15:735,54,0	1/1:0,20:20:57.19:797,57,0	1/1:0,9:9:24.08:336,24,0	1/1:0,18:18:51.17:713,51,0	1/1:1,18:19:57.18:780,57,0	1/1:0,16:16:45.15:629,45,0	1/1:0,22:22:66.22:923,66,0	1/1:0,27:27:75.25:1049,75,0	1/1:0,26:26:75.25:1049,75,0	1/1:0,5:5:15.05:210,15,0
chr10	99535047	.	AAAC	A	2622.85	PASS	AB=0.977;AC=24;AF=0.429;AN=56;BaseQRankSum=-7.389;DP=551;FS=1.157;HRun=0;HaplotypeScore=153.4384;InbreedingCoeff=0.1196;MQ=52.37;MQ0=28;MQRankSum=-2.075;QD=8.17;ReadPosRankSum=3.287;VQSLOD=3.0505;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:43.37:0,43,307	0/1:10,0:10:13.57:71,0,14	0/0:42,0:8:18.47:0,18,183	0/1:41,0:9:9.24:9,0,40	0/0:25,0:25:67.47:0,67,487	0/0:15,0:15:33.73:0,34,300	0/1:9,0:9:28.61:57,0,29	0/1:29,0:26:99:191,0,151	0/1:9,2:11:10.01:181,0,10	0/0:27,0:26:68.60:0,69,458	0/0:25,0:25:73.92:0,74,541	0/1:12,0:12:34.56:80,0,35	1/1:12,0:12:9.93:151,10,0	1/1:20,1:21:4.14:306,4,0	1/1:14,0:14:16.79:213,17,0	0/1:19,2:21:38.47:243,0,38	0/1:21,0:20:36.12:162,0,36	0/0:9,0:9:12.51:0,13,268	0/1:22,0:18:56.38:106,0,56	1/1:30,0:28:46.08:320,46,0	0/1:5,0:4:0.32:14,0,0	0/1:15,0:15:35.12:91,0,35	1/1:15,1:15:40.13:226,40,0	1/1:5,0:5:11.49:68,11,0	0/0:23,0:23:64.41:0,64,437	0/0:37,0:35:99:0,100,743	0/1:25,1:24:93.37:316,0,93	0/0:8,0:6:2.94:0,3,22
chr10	99535050	.	CAAA	C	6573.28	PASS	AB=0.588;AC=34;AF=0.630;AN=54;BaseQRankSum=-12.008;DP=552;FS=2.360;HRun=14;HaplotypeScore=137.4425;InbreedingCoeff=0.7821;MQ=51.99;MQ0=33;MQRankSum=-0.379;QD=21.62;ReadPosRankSum=-2.469;VQSLOD=2.7000;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:19:37.06:0,37,282	1/1:4,6:10:24.04:280,24,0	0/0:48,0:9:10.90:0,11,120	0/0:38,0:6:0.47:0,0,1	0/0:7,0:24:34.46:0,34,145	0/0:7,0:16:31.03:0,31,259	1/1:2,6:8:15.02:175,15,0	1/1:16,13:26:19.91:325,20,0	1/1:5,6:11:27.04:307,27,0	0/1:8,0:26:3.07:3,0,25	0/0:6,0:25:36.38:0,36,164	0/1:3,7:10:33.55:218,0,34	1/1:3,8:12:32.75:344,33,0	1/1:8,10:20:45.69:522,46,0	1/1:3,11:14:39.11:447,39,0	1/1:11,11:22:51.05:582,51,0	1/1:13,7:19:33.88:444,34,0	0/0:7,0:9:23.84:0,24,352	1/1:12,10:18:5.27:411,5,0	1/1:5,23:26:71.76:815,72,0	1/1:2,1:3:4.57:67,5,0	1/1:7,10:18:41.74:457,42,0	1/1:5,12:16:46.67:511,47,0	1/1:2,2:4:11.91:107,12,0	0/0:3,0:23:12.46:0,12,59	0/0:11,0:36:59.55:0,60,302	1/1:13,14:25:32.47:558,32,0	./.
chr10	99535054	.	A	AC	1155.88	PASS	AB=1.000;AC=12;AF=0.222;AN=54;BaseQRankSum=-3.826;DP=578;FS=1.753;HRun=0;HaplotypeScore=140.4501;InbreedingCoeff=0.7328;MQ=51.18;MQ0=38;MQRankSum=5.349;QD=7.36;ReadPosRankSum=-0.582;VQSLOD=3.2822;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:47.24:0,47,381	0/0:10,0:10:16.14:0,16,142	0/0:52,0:9:20.28:0,20,151	0/0:43,0:7:7.47:0,7,66	1/1:25,0:25:13.57:190,14,0	0/0:21,1:20:11.42:0,11,341	0/0:9,0:9:20.90:0,21,158	0/0:26,1:23:2.71:0,3,218	0/0:14,0:14:33.44:0,33,254	1/1:29,0:28:35.49:338,35,0	1/1:24,0:24:46.38:237,46,0	0/1:10,0:10:2.30:2,0,143	0/0:12,0:12:26.62:0,27,210	0/0:20,0:20:38.81:0,39,312	0/0:14,0:14:23.18:0,23,211	0/0:24,0:24:57.44:0,57,433	0/0:18,1:18:12.08:0,12,218	0/0:11,0:11:21.80:0,22,273	0/0:25,0:21:30.88:0,31,274	0/0:29,0:27:56.90:0,57,462	0/0:5,0:4:4.33:0,4,42	0/0:17,0:17:30.17:0,30,223	0/0:17,0:16:32.29:0,32,294	0/1:4,0:4:11.44:11,0,38	1/1:23,0:23:53.99:283,54,0	1/1:42,0:38:41.58:266,42,0	0/0:24,1:23:22.49:0,22,343	./.
chr10	99535072	.	CAA	C	953.42	PASS	AB=0.756;AC=2;AF=0.037;AN=54;BaseQRankSum=1.346;DP=607;FS=3.008;HRun=10;HaplotypeScore=135.7061;InbreedingCoeff=-0.0412;MQ=58.28;MQ0=32;MQRankSum=-5.303;QD=9.93;ReadPosRankSum=1.083;VQSLOD=1.0762;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:33.09:0,33,359	0/0:8,0:8:24.08:0,24,372	0/0:62,0:12:11.11:0,11,140	0/1:53,0:10:13.66:14,0,109	0/0:22,0:23:68.71:0,69,1031	0/0:25,0:22:62.75:0,63,657	0/0:10,0:11:26.58:0,27,389	0/0:29,0:26:56.16:0,56,781	0/0:13,0:14:38.62:0,39,568	0/0:29,0:28:84.28:0,84,1311	0/0:23,0:24:66.22:0,66,1020	0/0:12,0:12:33.11:0,33,499	0/0:13,0:13:36.12:0,36,571	0/0:14,0:17:46.67:0,47,658	0/0:15,0:15:42.14:0,42,654	0/0:21,0:21:54.18:0,54,854	0/0:19,0:19:43.89:0,44,788	0/0:10,0:10:24.06:0,24,357	0/0:21,0:23:51.06:0,51,800	0/0:30,0:29:74.52:0,75,1093	0/0:4,0:4:8.52:0,9,104	0/0:18,0:18:51.16:0,51,774	0/0:18,0:17:48.16:0,48,760	0/0:8,0:8:24.05:0,24,352	0/0:23,0:23:66.22:0,66,1045	0/1:7,34:38:31.58:1025,0,32	0/0:25,0:25:66.18:0,66,1016	./.
chr10	99535382	.	T	TA	10888.14	PASS	AB=0.584;AC=48;AF=0.857;AN=56;BaseQRankSum=-0.133;DP=499;FS=7.125;HRun=10;HaplotypeScore=76.8082;InbreedingCoeff=0.7325;MQ=79.15;MQ0=0;MQRankSum=-3.570;QD=24.09;ReadPosRankSum=2.419;VQSLOD=5.3093;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:39.10:416,39,0	1/1:1,7:8:21.05:224,21,0	0/0:12,0:13:18:0,18,134	0/0:16,0:15:26.38:0,26,207	0/1:7,22:29:4.61:556,0,5	1/1:6,19:25:54.14:576,54,0	1/1:1,6:7:12.03:128,12,0	0/1:9,17:27:8.62:458,0,9	1/1:3,8:11:24.06:256,24,0	1/1:5,17:22:26.48:487,26,0	1/1:2,23:25:63.16:672,63,0	1/1:1,16:17:45.11:480,45,0	1/1:2,20:23:59.97:609,60,0	1/1:4,8:12:27.07:287,27,0	1/1:2,14:17:38.79:398,39,0	1/1:1,12:14:29.91:302,30,0	1/1:1,6:8:20.89:206,21,0	0/0:18,0:18:50.94:0,51,419	1/1:3,17:21:54:557,54,0	1/1:5,23:28:44.46:656,44,0	1/1:1,4:5:12.03:128,12,0	1/1:3,17:20:51.13:541,51,0	1/1:4,19:23:32.50:551,32,0	1/1:2,13:15:39.10:416,39,0	1/1:0,22:21:60.15:640,60,0	1/1:3,22:25:60.15:639,60,0	1/1:3,15:19:41.72:417,42,0	1/1:5,9:14:27.07:288,27,0
chr10	99538255	.	ATG	A	14545.75	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=11.839;DP=789;FS=11.719;HRun=0;HaplotypeScore=98.6618;InbreedingCoeff=0.9784;MQ=60.60;MQ0=16;MQRankSum=-0.027;QD=25.74;ReadPosRankSum=3.152;VQSLOD=5.5394;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,18:24:40.07:514,40,0	1/1:3,10:12:27.08:332,27,0	0/0:49,1:18:21.07:0,21,318	0/0:29,0:12:7.27:0,7,100	0/0:31,0:31:78.27:0,78,1260	1/1:6,22:28:60.19:739,60,0	1/1:6,23:28:12.24:620,12,0	1/1:13,14:27:45.12:540,45,0	1/1:3,22:26:63.03:753,63,0	0/0:36,0:36:87.29:0,87,1388	0/0:29,0:29:72.25:0,72,1175	1/1:4,24:28:63.20:775,63,0	1/1:4,22:25:63.20:776,63,0	1/1:4,14:18:39.12:480,39,0	1/1:7,25:31:63.20:775,63,0	1/1:6,28:34:75.24:923,75,0	1/1:5,19:24:45.12:554,45,0	0/0:18,0:18:42.13:0,42,646	1/1:6,16:23:47.94:539,48,0	1/1:7,23:31:69.05:827,69,0	1/1:5,24:29:72.23:886,72,0	1/1:5,35:40:99:1219,99,0	1/1:5,21:26:60.02:715,60,0	1/1:4,28:32:43.20:719,43,0	0/0:31,0:31:69.24:0,69,1126	1/1:10,19:29:57.01:678,57,0	1/1:6,25:31:66.21:812,66,0	1/1:2,11:13:30.09:369,30,0
chr10	99539307	.	G	GC	21737.11	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-6.429;DP=702;FS=0.689;HRun=1;HaplotypeScore=109.7495;InbreedingCoeff=0.9997;MQ=78.84;MQ0=0;MQRankSum=-5.265;QD=40.40;ReadPosRankSum=4.927;VQSLOD=4.5089;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:87.29:1303,87,0	1/1:0,13:13:27.09:404,27,0	0/0:22,0:22:63.20:0,63,796	0/0:20,0:20:54.17:0,54,685	0/0:26,0:26:78.25:0,78,1013	1/1:1,29:30:72.24:1079,72,0	1/1:2,22:24:69.18:1008,69,0	1/1:1,38:39:99:1665,114,0	1/1:1,22:23:66.22:989,66,0	0/0:34,0:34:99:0,102,1324	0/0:24,0:24:72.22:0,72,920	1/1:2,25:27:75.20:1098,75,0	1/1:0,39:39:99:1573,105,0	1/1:0,21:21:57.19:854,57,0	1/1:1,28:29:75.25:1121,75,0	1/1:0,25:25:63.21:944,63,0	1/1:0,30:30:84.28:1259,84,0	0/0:12,0:12:36.07:0,36,444	1/1:0,12:12:36.12:536,36,0	1/1:2,31:33:87.29:1285,87,0	1/1:0,14:14:36.12:540,36,0	1/1:0,20:20:54.18:807,54,0	1/1:0,27:27:78.26:1167,78,0	1/1:1,20:21:60.20:899,60,0	0/0:26,0:26:78.25:0,78,1012	1/1:1,22:23:66.19:965,66,0	1/1:1,34:36:87.29:1298,87,0	1/1:0,21:21:63.21:944,63,0
chr10	99542263	.	CCACACACA	C	1586.80	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=-5.947;DP=627;FS=1.747;HRun=0;HaplotypeScore=202.4539;InbreedingCoeff=0.6193;MQ=62.73;MQ0=17;MQRankSum=-1.529;QD=12.80;ReadPosRankSum=0.618;VQSLOD=2.7092;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:5.75:0,6,105	0/0:13,0:15:9.03:0,9,163	./.	0/0:32,0:15:6.02:0,6,105	1/1:16,11:28:15:323,15,0	0/0:17,0:17:6.02:0,6,202	0/0:19,0:19:3.01:0,3,60	0/0:25,0:23:27.05:0,27,480	0/0:18,0:18:3.01:0,3,43	1/1:19,9:26:24.55:480,25,0	1/1:8,14:22:15.05:306,15,0	0/0:21,0:25:11.95:0,12,204	0/0:15,0:15:2.97:0,3,20	0/0:20,0:21:6.02:0,6,136	0/0:30,0:32:12.04:0,12,258	0/0:19,0:19:12.04:0,12,375	0/0:20,0:20:15.05:0,15,261	0/0:10,0:15:11.19:0,11,262	0/0:23,0:22:31.85:0,32,541	0/0:14,0:15:6.02:0,6,102	0/0:21,0:24:9.01:0,9,124	0/0:18,0:18:3.01:0,3,69	0/1:18,0:18:0:0,0,0	0/0:26,0:28:9.03:0,9,198	1/1:13,14:27:30.06:626,30,0	0/0:22,0:21:27.09:0,27,469	0/0:14,0:14:18.02:0,18,285	0/0:6,0:7:6.02:0,6,157
chr10	99542270	.	C	CACACAGACACAGACACAG	22570.91	PASS	AB=0.935;AC=35;AF=0.625;AN=56;BaseQRankSum=1.007;DP=754;FS=15.365;HRun=0;HaplotypeScore=367.2196;InbreedingCoeff=0.4935;MQ=50.00;MQ0=17;MQRankSum=-3.626;QD=39.67;ReadPosRankSum=2.196;VQSLOD=2.4434;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:32:75.63:414,0,76	1/1:17,0:17:27.08:883,27,0	0/0:39,0:17:35.84:0,36,460	0/0:29,0:11:24.06:0,24,527	0/0:25,0:25:39.09:0,39,915	1/1:3,0:27:7.58:473,8,0	1/1:25,0:24:29.97:415,30,0	1/1:36,0:34:66.06:1545,66,0	1/1:24,0:24:29.94:1078,30,0	0/0:25,0:23:68.58:0,69,1480	0/0:22,0:22:32.70:0,33,694	1/1:36,0:35:26.46:1441,26,0	1/1:28,0:28:51.09:2382,51,0	1/1:31,0:31:38.52:1273,39,0	1/1:35,0:35:41.91:741,42,0	0/1:5,11:31:9.95:802,0,10	1/1:22,0:21:45.15:1147,45,0	0/0:18,0:18:40.05:0,40,939	1/1:25,0:24:60.39:1971,60,0	1/1:23,0:22:13.83:797,14,0	0/1:27,0:27:44.56:168,0,45	0/1:28,0:28:1.83:454,0,2	0/1:21,0:21:12.75:108,0,13	0/1:36,0:36:15.85:743,0,16	0/0:27,0:26:45.74:0,46,1230	1/1:26,0:25:69.21:2651,69,0	1/1:26,0:26:51.17:2280,51,0	0/1:11,0:11:13.48:807,0,13
chr10	99543321	.	GCA	G	1735.51	PASS	AB=0.818;AC=36;AF=0.783;AN=46;BaseQRankSum=4.893;DP=698;FS=3.569;HRun=0;HaplotypeScore=142.0726;InbreedingCoeff=0.0520;MQ=57.60;MQ0=27;MQRankSum=0.217;QD=3.17;ReadPosRankSum=2.411;VQSLOD=2.4288;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:30:2.50:14,3,0	0/1:8,1:10:6.52:37,0,7	./.	./.	0/1:17,0:30:0:0,0,0	./.	1/1:28,2:29:5.97:64,6,0	./.	1/1:11,7:20:17.71:156,18,0	1/1:17,0:27:25.28:122,25,0	0/1:9,0:12:0:0,0,0	0/1:28,2:31:12.09:66,0,12	1/1:21,2:23:12.03:125,12,0	1/1:20,5:26:15.03:160,15,0	1/1:30,0:34:23.35:177,23,0	1/1:21,6:29:17.70:156,18,0	0/1:28,0:31:16.59:17,0,311	0/0:12,0:12:9.50:0,10,128	./.	0/1:15,3:19:32.05:84,0,32	1/1:42,5:47:6.29:47,6,0	1/1:14,3:17:14.39:120,14,0	1/1:14,3:17:3.48:33,3,0	0/1:24,13:37:51.16:233,0,51	1/1:14,0:23:9.45:36,9,0	0/1:16,3:20:10.57:73,0,11	1/1:15,4:19:12.03:128,12,0	1/1:8,0:9:2.84:14,3,0
chr10	99543589	.	C	CT	21370.84	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-0.069;DP=788;FS=0.958;HRun=3;HaplotypeScore=92.8104;InbreedingCoeff=0.9757;MQ=84.32;MQ0=0;MQRankSum=-5.672;QD=37.23;ReadPosRankSum=2.304;VQSLOD=5.0943;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,46:49:99:1890,135,0	1/1:0,10:10:21.07:294,21,0	0/0:29,0:29:54.82:0,55,876	0/0:21,0:21:54.07:0,54,599	0/0:42,0:42:99:0,114,1344	1/1:0,30:30:81.27:1134,81,0	1/1:1,29:30:81.27:1134,81,0	1/1:1,27:28:81.26:1117,81,0	1/1:1,38:39:99:1468,105,0	0/0:47,0:47:99:0,138,1647	0/0:26,0:26:75.23:0,75,899	1/1:1,17:18:45.15:630,45,0	1/1:1,29:30:81.27:1134,81,0	1/1:1,21:22:54.18:755,54,0	1/1:5,32:37:93.31:1302,93,0	1/1:3,35:38:99:1470,105,0	1/1:1,25:26:66.22:924,66,0	0/0:21,0:21:60.09:0,60,675	1/1:2,25:27:75.23:1016,75,0	1/1:2,20:22:57.15:776,57,0	1/1:0,25:25:69.23:966,69,0	1/1:0,19:19:57.19:797,57,0	1/1:1,37:38:99:1487,108,0	1/1:1,27:28:72.24:1008,72,0	0/0:28,0:28:78.03:0,78,894	1/1:3,24:27:6.25:933,6,0	1/1:1,24:25:69.23:966,69,0	1/1:2,4:6:12.04:168,12,0
chr10	99543777	.	CT	C	1800.86	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.474;DP=654;FS=3.515;HRun=1;HaplotypeScore=128.1590;InbreedingCoeff=0.9971;MQ=58.18;MQ0=2;MQRankSum=3.774;QD=34.63;ReadPosRankSum=0.404;VQSLOD=3.2701;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:69.23:964,69,0	0/0:7,0:7:21.07:0,21,336	0/0:31,0:18:49.71:0,50,732	0/0:29,0:20:54.04:0,54,803	0/0:21,0:21:60.20:0,60,953	1/1:0,24:24:69.23:958,69,0	0/0:16,0:16:45.15:0,45,720	0/0:23,0:23:66.22:0,66,1044	0/0:25,0:25:75.21:0,75,1122	0/0:26,0:25:75.25:0,75,1178	0/0:9,0:9:27.09:0,27,432	0/0:23,0:23:69.24:0,69,1103	0/0:20,0:20:60.20:0,60,955	0/0:21,0:21:60.20:0,60,959	0/0:25,0:24:75.26:0,75,1197	0/0:28,0:28:84.29:0,84,1335	0/0:45,0:45:99:0,132,2070	0/0:42,0:42:99:0,123,1937	0/0:19,0:19:57.18:0,57,880	0/0:20,0:20:60.19:0,60,936	0/0:27,0:27:78.27:0,78,1242	0/0:19,0:19:54.18:0,54,861	0/0:15,0:15:45.15:0,45,719	0/0:30,0:30:87.30:0,87,1388	0/0:28,0:28:84.24:0,84,1287	0/0:26,0:26:78.25:0,78,1216	0/0:17,0:17:51.17:0,51,811	0/0:10,0:10:30.08:0,30,454
chr10	99543928	.	GGAGAGAGA	G	1045.51	PASS	AB=0.893;AC=9;AF=0.173;AN=52;BaseQRankSum=3.009;DP=643;FS=48.253;HRun=0;HaplotypeScore=203.7771;InbreedingCoeff=0.8028;MQ=71.59;MQ0=13;MQRankSum=-3.034;QD=7.74;ReadPosRankSum=-2.535;VQSLOD=1.0134;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:51.17:0,51,1435	0/0:8,0:11:15.05:0,15,343	./.	./.	1/1:24,11:36:17.97:298,18,0	0/1:22,1:25:45.05:45,0,398	0/0:18,0:20:12.57:0,13,183	0/0:23,0:22:19.78:0,20,670	0/0:12,0:17:18.06:0,18,645	1/1:24,7:31:21.04:407,21,0	1/1:18,6:25:11.62:225,12,0	0/0:12,0:19:21.05:0,21,423	0/0:16,0:21:14.88:0,15,310	0/0:16,0:16:21.07:0,21,737	0/0:11,0:20:23.19:0,23,708	0/0:15,0:19:11.16:0,11,369	0/0:18,0:19:26.30:0,26,753	0/0:17,0:24:21.07:0,21,724	0/0:17,0:17:28.52:0,29,828	0/0:17,0:17:21.06:0,21,674	0/0:23,0:22:18.06:0,18,634	0/0:21,0:20:36.12:0,36,1000	0/0:25,0:25:27.08:0,27,822	0/0:17,0:20:30.10:0,30,891	1/1:13,5:18:9.03:225,9,0	0/0:19,0:19:33.10:0,33,989	0/0:13,0:24:24.52:0,25,664	0/0:8,0:11:22.63:0,23,675
chr10	99544384	.	GAAA	G	10927.34	PASS	AB=0.518;AC=39;AF=0.696;AN=56;BaseQRankSum=1.090;DP=592;FS=8.847;HRun=12;HaplotypeScore=96.2797;InbreedingCoeff=0.9030;MQ=66.09;MQ0=2;MQRankSum=0.809;QD=24.39;ReadPosRankSum=6.304;VQSLOD=3.1343;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:57.16:720,57,0	1/1:1,7:8:17.99:207,18,0	0/0:17,0:15:20.27:0,20,331	0/0:11,0:11:29.31:0,29,471	0/0:21,0:24:63.13:0,63,1120	1/1:3,18:21:32.10:447,32,0	1/1:0,17:17:42.13:531,42,0	1/1:8,28:36:78.82:932,79,0	1/1:1,13:14:30.09:377,30,0	0/0:25,0:26:60.13:0,60,977	0/0:18,0:23:63.11:0,63,1027	1/1:1,17:18:42.13:531,42,0	1/1:5,25:30:47.90:880,48,0	1/1:3,15:18:18.16:434,18,0	1/1:6,23:29:42.10:531,42,0	1/1:1,19:21:43.71:566,44,0	1/1:3,20:23:39.10:493,39,0	0/0:11,0:12:36.10:0,36,651	1/1:5,28:33:87.09:1041,87,0	1/1:4,24:29:49.61:641,50,0	1/1:2,11:13:23.99:283,24,0	1/1:3,22:25:59.83:712,60,0	1/1:3,18:21:50.76:596,51,0	1/1:2,14:16:30.09:378,30,0	0/0:23,0:24:57.11:0,57,981	0/1:2,1:29:52.26:59,0,52	1/1:2,18:20:45.13:569,45,0	0/0:4,0:6:9.69:0,10,51
chr10	99545003	.	AG	A	1382.79	PASS	AB=0.921;AC=14;AF=0.292;AN=48;BaseQRankSum=6.955;DP=591;FS=1.346;HRun=1;HaplotypeScore=204.7378;InbreedingCoeff=-0.4225;MQ=25.11;MQ0=164;MQRankSum=-0.929;QD=4.19;ReadPosRankSum=1.681;VQSLOD=0.2658;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:14:29.26:0,29,410	0/1:9,3:12:93.09:93,0,210	./.	./.	0/1:29,1:23:3.83:4,0,600	0/1:20,1:12:40.11:40,0,331	0/0:32,0:8:20.56:0,21,261	./.	0/1:13,0:6:20.73:21,0,150	0/0:32,0:16:45.87:0,46,546	0/0:34,2:29:0.64:0,1,383	0/0:19,0:10:21.07:0,21,280	0/1:8,4:9:99:145,0,100	0/0:23,0:9:26.88:0,27,324	0/0:10,0:9:24.03:0,24,314	0/1:14,1:13:50.86:51,0,237	0/1:9,0:4:30.47:30,0,36	0/0:11,0:6:12.01:0,12,134	0/0:13,0:8:18.99:0,19,174	0/1:35,5:31:99:335,0,325	./.	0/1:41,5:31:99:261,0,384	0/1:25,4:20:99:202,0,214	0/1:28,1:13:44.30:44,0,92	0/0:45,1:41:52.73:0,53,1119	0/1:19,1:10:48.19:48,0,261	0/1:23,2:19:99:111,0,368	0/1:28,1:15:99:140,0,148
chr10	99545072	.	A	AG	993.59	PASS	AB=0.948;AC=22;AF=0.611;AN=36;BaseQRankSum=-1.125;DP=316;FS=26.858;HRun=0;HaplotypeScore=17.2588;InbreedingCoeff=0.0537;MQ=25.09;MQ0=177;MQRankSum=-1.183;QD=6.02;ReadPosRankSum=-3.164;VQSLOD=0.9994;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:5:5.91:45,6,0	./.	0/0:2,0:1:2.80:0,3,13	0/0:6,0:2:1.42:0,1,3	0/1:14,2:5:26.57:140,0,27	1/1:10,0:4:7.29:34,7,0	./.	./.	./.	0/1:22,1:8:99:105,0,180	0/1:16,1:12:44.82:180,0,45	./.	./.	1/1:7,0:1:3.01:37,3,0	1/1:2,2:2:3.01:48,3,0	./.	./.	0/0:16,0:7:12.03:0,12,150	1/1:9,0:1:3.01:35,3,0	1/1:5,0:1:3.01:30,3,0	./.	1/1:14,0:5:6.02:93,6,0	0/1:4,0:1:0:0,0,0	0/1:16,0:3:4.56:37,0,5	0/1:15,2:12:58.29:200,0,58	./.	1/1:11,2:3:9.03:129,9,0	0/0:11,0:3:3.01:0,3,40
chr10	99545102	.	AAGT	A	194.80	PASS	AB=0.600;AC=7;AF=0.500;AN=14;BaseQRankSum=-2.507;DP=107;FS=5.497;HRun=0;HaplotypeScore=31.6456;MQ=71.06;MQ0=32;MQRankSum=-1.899;QD=6.09;ReadPosRankSum=-1.595;VQSLOD=1.0045;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:17,0:6:5.08:0,5,96	0/0:15,0:6:4.64:0,5,57	0/1:2,4:2:0:0,0,0	./.	./.	./.	./.	1/1:4,6:4:11.98:145,12,0	1/1:6,4:7:11.75:86,12,0	./.	./.	./.	./.	./.	./.	0/0:12,0:8:10.58:0,11,117	./.	./.	./.	./.	./.	./.	1/1:0,6:2:3.01:51,3,0	./.	./.	./.
chr10	99545121	.	GC	G	580.05	PASS	AC=10;AF=0.714;AN=14;BaseQRankSum=-2.795;DP=73;FS=2.574;HRun=1;HaplotypeScore=29.2970;MQ=75.24;MQ0=3;MQRankSum=-3.391;QD=13.49;ReadPosRankSum=1.453;VQSLOD=2.6476;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:12,1:4:2.85:0,3,69	0/0:12,1:5:8.74:0,9,52	1/1:0,7:3:3.01:42,3,0	./.	./.	./.	./.	1/1:0,8:5:15.05:209,15,0	1/1:0,10:9:12.04:167,12,0	./.	./.	./.	./.	./.	./.	1/1:0,11:9:12.04:168,12,0	./.	./.	./.	./.	./.	./.	1/1:0,7:3:6.02:83,6,0	./.	./.	./.
chr10	99546171	.	T	TCTTTTTACTTAGTGGTCTTTAGAG	45329.29	PASS	AB=0.714;AC=55;AF=0.982;AN=56;BaseQRankSum=-0.245;DP=286;FS=11.015;HRun=0;HaplotypeScore=347.0639;InbreedingCoeff=-0.0254;MQ=59.32;MQ0=0;MQRankSum=-1.631;QD=158.49;ReadPosRankSum=1.400;VQSLOD=3.7189;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:6.02:408,6,0	1/1:3,0:3:9.03:711,9,0	1/1:2,1:7:21.07:1251,21,0	0/1:3,0:5:4.52:520,0,5	1/1:9,0:9:27.09:1294,27,0	1/1:17,0:17:42.14:2312,42,0	1/1:8,0:8:24.08:1436,24,0	1/1:14,0:14:42.13:2646,42,0	1/1:13,0:13:33.11:2242,33,0	1/1:12,0:12:33.11:2256,33,0	1/1:12,0:12:30.10:2005,30,0	1/1:11,0:11:27.09:1726,27,0	1/1:13,0:13:39.13:2793,39,0	1/1:16,0:16:42.14:2494,42,0	1/1:13,0:13:27.09:1822,27,0	1/1:21,0:21:47.37:3175,47,0	1/1:4,0:4:9.03:797,9,0	1/1:8,0:8:24.08:1280,24,0	1/1:12,0:12:27.08:1442,27,0	1/1:11,0:11:21.07:1432,21,0	1/1:5,0:5:12:507,12,0	1/1:14,0:14:30.10:2470,30,0	1/1:13,0:13:33.11:2496,33,0	1/1:5,0:5:12.04:570,12,0	1/1:10,0:10:20.28:1215,20,0	1/1:10,0:10:27.09:1303,27,0	1/1:12,0:12:30.10:2045,30,0	1/1:4,0:4:12.04:682,12,0
chr10	99548375	.	A	ATT	2412.07	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-0.141;DP=455;FS=20.524;HRun=2;HaplotypeScore=180.6057;InbreedingCoeff=0.9298;MQ=67.89;MQ0=1;MQRankSum=-4.470;QD=36.00;ReadPosRankSum=-0.680;VQSLOD=1.6702;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:54.09:0,54,741	0/0:3,0:3:6.02:0,6,67	0/0:25,0:22:20.30:0,20,516	0/0:11,0:11:10.63:0,11,315	1/1:18,2:20:45.09:661,45,0	0/0:20,0:20:51.16:0,51,717	0/0:17,0:17:51.12:0,51,549	0/0:18,0:18:54.09:0,54,574	0/0:13,0:13:33.08:0,33,359	1/1:12,3:15:43.21:612,43,0	1/1:16,1:17:48.12:701,48,0	0/0:16,0:16:39.09:0,39,413	0/0:16,0:16:39.10:0,39,423	0/0:22,0:22:63.15:0,63,670	0/0:16,0:16:42.11:0,42,458	0/0:17,0:17:48.11:0,48,493	0/0:6,0:6:18.05:0,18,199	0/0:20,0:20:57.19:0,57,829	0/0:12,0:12:36.09:0,36,406	0/0:21,0:21:60.15:0,60,640	0/0:14,0:14:36.09:0,36,379	0/0:22,0:22:54.13:0,54,577	0/0:18,0:18:42.10:0,42,439	0/0:15,0:15:33.09:0,33,363	1/1:14,1:15:42.11:598,42,0	0/0:24,0:23:63.11:0,63,641	0/0:17,0:17:51.12:0,51,530	0/0:3,0:3:6.01:0,6,61
chr10	99548377	.	TAA	T	7113.92	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-1.846;DP=463;FS=9.099;HRun=11;HaplotypeScore=157.5512;InbreedingCoeff=0.9683;MQ=68.72;MQ0=1;MQRankSum=-3.342;QD=24.79;ReadPosRankSum=2.351;VQSLOD=3.1495;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:56.63:0,57,788	1/1:0,3:3:5.96:52,6,0	0/0:25,0:23:35.54:0,36,446	0/0:12,0:12:19.44:0,19,269	0/0:3,0:21:53.70:0,54,521	0/0:19,0:20:51.12:0,51,740	1/1:2,15:17:42.07:447,42,0	1/1:6,12:18:39.07:415,39,0	1/1:3,10:13:32.97:318,33,0	0/0:11,0:18:40.63:0,41,370	0/0:3,0:19:44.94:0,45,404	1/1:3,13:16:39.05:401,39,0	1/1:3,12:15:30.06:319,30,0	1/1:1,20:21:51.10:543,51,0	1/1:3,12:15:36.02:362,36,0	1/1:1,16:17:48.12:508,48,0	1/1:1,5:6:12.02:128,12,0	0/0:21,0:21:60.16:0,60,890	1/1:3,10:13:30.03:309,30,0	1/1:3,18:21:48.05:510,48,0	1/1:2,13:15:33.04:350,33,0	1/1:1,20:21:50.98:510,51,0	1/1:1,18:19:45:454,45,0	1/1:3,11:14:27.04:285,27,0	0/0:1,0:14:39:0,39,345	1/1:2,20:22:59.84:609,60,0	1/1:1,16:17:48.12:511,48,0	1/1:0,3:3:8.98:84,9,0
chr10	99549838	.	AAGAAAAAG	A	3862.48	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=8.751;DP=599;FS=1.412;HRun=0;HaplotypeScore=131.6168;InbreedingCoeff=0.5234;MQ=48.68;MQ0=43;MQRankSum=-2.090;QD=24.14;ReadPosRankSum=-2.446;VQSLOD=3.1665;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:27:62.51:0,63,1441	0/0:7,0:7:18.06:0,18,316	0/0:55,0:10:0.64:0,1,130	0/0:72,0:12:24.22:0,24,226	1/1:7,25:31:50.81:723,51,0	0/0:20,0:20:23.02:0,23,675	0/0:14,0:14:38.82:0,39,761	0/0:25,0:23:52.81:0,53,916	0/0:13,0:12:5.39:0,5,413	1/1:20,0:18:49.41:886,49,0	1/1:22,0:21:54.83:969,55,0	0/1:19,0:18:3.79:4,0,548	0/0:15,0:13:35.98:0,36,609	0/0:16,0:15:29.27:0,29,497	0/0:10,0:9:22.50:0,23,445	0/0:17,0:16:44.75:0,45,792	0/0:26,0:21:42.65:0,43,976	0/0:22,0:20:36.06:0,36,754	0/0:19,0:17:26.26:0,26,655	0/0:27,0:25:71.12:0,71,1321	0/0:5,0:5:8.77:0,9,174	0/1:6,0:6:20.72:21,0,141	0/0:16,0:16:20.17:0,20,654	0/0:9,0:7:11.11:0,11,238	1/1:21,0:20:52.73:1039,53,0	0/1:30,0:30:99:177,0,1246	0/0:20,0:17:12.23:0,12,709	0/1:9,0:9:44.72:45,0,306
chr10	99549839	.	AG	A	788.37	PASS	AB=0.989;AC=11;AF=0.196;AN=56;BaseQRankSum=11.572;DP=595;FS=2.089;HRun=1;HaplotypeScore=85.7888;InbreedingCoeff=0.6604;MQ=49.19;MQ0=42;MQRankSum=-0.586;QD=4.90;ReadPosRankSum=-1.223;VQSLOD=0.0663;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:64.16:0,64,777	0/0:7,0:7:18.06:0,18,225	0/1:54,2:10:0.20:0,0,84	0/0:71,1:12:25.50:0,25,215	1/1:30,0:29:40.93:210,41,0	0/0:19,0:19:17.15:0,17,445	0/0:14,0:14:28.75:0,29,422	0/0:25,0:23:52.98:0,53,605	0/0:12,0:11:5.87:0,6,232	1/1:19,0:17:28.79:212,29,0	1/1:18,2:20:50.88:286,51,0	0/0:17,1:17:18.84:0,19,307	0/0:15,0:13:36.01:0,36,407	0/0:16,0:15:30.43:0,30,289	0/0:11,0:10:29.55:0,30,296	0/0:18,0:17:46.79:0,47,486	0/0:26,0:21:44.16:0,44,537	0/0:21,0:19:28.16:0,28,370	0/0:19,0:17:37.67:0,38,479	0/0:28,0:26:73.14:0,73,815	0/0:5,0:5:5.33:0,5,76	0/1:6,0:6:15.27:15,0,68	0/0:16,1:17:23.14:0,23,434	0/0:9,0:7:11.03:0,11,115	1/1:20,0:19:39.12:220,39,0	0/0:29,1:30:14.28:0,14,740	0/0:20,0:17:25.26:0,25,448	0/1:9,0:9:10.22:10,0,193
chr10	99549840	.	GAAAAAGA	G	3186.42	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=8.946;DP=605;FS=1.512;HRun=0;HaplotypeScore=126.1192;InbreedingCoeff=0.7021;MQ=49.38;MQ0=42;MQRankSum=0.042;QD=25.09;ReadPosRankSum=-2.547;VQSLOD=2.9344;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:46.68:0,47,1195	0/0:8,0:8:21.07:0,21,417	0/0:56,0:10:14.18:0,14,134	0/0:71,0:12:26.36:0,26,327	1/1:28,1:28:47.99:619,48,0	0/0:19,0:19:38.56:0,39,577	0/0:15,0:15:39.08:0,39,940	0/0:25,0:24:53.28:0,53,1267	0/0:13,0:12:23.96:0,24,531	1/1:19,0:17:51.17:856,51,0	1/1:19,2:20:47.57:831,48,0	0/0:19,0:18:18.97:0,19,789	0/0:15,0:13:30.09:0,30,798	0/0:16,0:15:24.96:0,25,603	0/0:11,0:10:27.04:0,27,654	0/0:18,0:17:44.47:0,44,1136	0/0:27,0:23:46.71:0,47,1245	0/0:20,0:18:32.82:0,33,767	0/0:20,0:17:30.46:0,30,916	0/0:29,0:27:66.64:0,67,1807	0/0:5,0:5:9.03:0,9,238	0/1:6,0:6:23.40:23,0,172	0/0:17,0:17:35.64:0,36,913	0/0:9,0:7:12.04:0,12,311	1/1:18,2:19:51.17:908,51,0	0/1:32,0:32:99:117,0,1754	0/0:20,0:17:23.58:0,24,963	0/0:9,0:9:3.49:0,3,470
chr10	99549845	.	AG	A	1048.08	PASS	AB=0.992;AC=16;AF=0.286;AN=56;BaseQRankSum=13.145;DP=593;FS=0.439;HRun=1;HaplotypeScore=81.8306;InbreedingCoeff=0.6033;MQ=51.59;MQ0=35;MQRankSum=0.897;QD=4.24;ReadPosRankSum=0.017;VQSLOD=0.1034;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:32:21.01:66,21,0	0/0:8,0:8:20.96:0,21,233	0/1:59,0:10:12.60:13,0,60	0/0:74,3:14:27.56:0,28,196	1/1:29,0:28:40.99:171,41,0	1/1:19,0:19:3.99:24,4,0	0/0:14,0:14:24.93:0,25,422	0/0:22,0:22:54.89:0,55,615	0/0:11,0:10:6.11:0,6,253	1/1:18,0:17:49.68:328,50,0	1/1:18,2:20:52.80:318,53,0	0/0:18,1:18:37.11:0,37,380	0/0:13,0:12:30.07:0,30,360	0/0:14,0:13:29.89:0,30,308	0/0:10,0:9:24.05:0,24,284	0/0:18,0:17:38.39:0,38,542	0/0:25,0:21:28.17:0,28,515	0/0:17,0:15:32.30:0,32,310	0/0:22,0:18:32.76:0,33,504	0/0:28,0:27:68.31:0,68,815	0/0:5,0:5:11.97:0,12,117	0/1:5,0:5:20.33:20,0,64	0/0:16,1:17:37.72:0,38,434	0/0:6,0:4:12.04:0,12,146	1/1:21,0:21:46.50:261,46,0	0/1:31,1:32:13.34:13,0,798	0/0:20,0:17:23.07:0,23,431	0/1:10,0:10:21.74:22,0,249
chr10	99549846	.	GA	G	1984.18	PASS	AB=0.985;AC=14;AF=0.250;AN=56;BaseQRankSum=10.842;DP=599;FS=7.691;HRun=10;HaplotypeScore=80.5136;InbreedingCoeff=0.8512;MQ=52.78;MQ0=34;MQRankSum=1.413;QD=11.02;ReadPosRankSum=0.503;VQSLOD=2.7448;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:32:71.50:599,72,0	0/0:8,0:8:18.05:0,18,197	0/0:59,0:10:4.90:0,5,48	0/0:79,0:15:21.07:0,21,150	1/1:29,0:28:37.22:309,37,0	1/1:4,15:19:38.99:339,39,0	0/0:15,0:15:42.06:0,42,440	0/0:21,0:21:50.93:0,51,544	0/0:13,0:12:24.05:0,24,257	1/1:18,0:17:48.74:302,49,0	1/1:22,0:22:38.19:317,38,0	0/0:19,0:18:40.63:0,41,418	0/0:12,0:11:30.08:0,30,331	0/0:14,0:13:27.04:0,27,284	0/0:10,0:9:24.06:0,24,265	0/0:18,0:17:48.13:0,48,530	0/0:24,1:21:22.07:0,22,472	0/0:16,0:14:24.98:0,25,241	0/0:23,0:19:42.08:0,42,451	0/0:28,0:27:65.54:0,66,776	0/0:5,0:5:12.03:0,12,131	0/1:5,0:5:0.89:1,0,58	0/0:16,1:17:13.05:0,13,369	0/0:7,0:5:15.02:0,15,156	1/1:21,0:21:42.62:301,43,0	0/1:32,1:33:0.61:1,0,762	0/0:20,0:17:33.09:0,33,365	0/0:10,0:10:18.38:0,18,260
chr10	99549847	.	A	AG	2100.53	PASS	AB=0.971;AC=10;AF=0.179;AN=56;BaseQRankSum=9.371;DP=598;FS=9.303;HRun=1;HaplotypeScore=79.7166;InbreedingCoeff=0.6951;MQ=52.97;MQ0=32;MQRankSum=0.948;QD=10.40;ReadPosRankSum=-2.458;VQSLOD=0.0637;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:62:0,62,372	0/0:8,0:8:21.03:0,21,269	0/0:56,0:10:11.56:0,12,121	0/1:79,0:15:12.78:13,0,171	1/1:29,0:28:42.10:456,42,0	0/0:19,0:19:43.95:0,44,256	0/0:15,0:15:39.60:0,40,538	0/0:22,0:22:57.11:0,57,739	0/0:13,0:12:30.02:0,30,357	1/1:0,18:17:51.16:676,51,0	1/1:6,16:22:4.43:507,4,0	0/0:19,0:18:39.86:0,40,507	0/0:13,0:12:30.10:0,30,416	0/0:14,0:13:30.06:0,30,383	0/0:10,0:9:27:0,27,348	0/0:17,0:16:48.16:0,48,653	0/0:25,0:21:51.03:0,51,658	0/0:16,0:14:28.24:0,28,332	0/0:23,0:19:56.77:0,57,654	0/0:28,0:27:75.23:0,75,1012	0/0:5,0:5:12.04:0,12,157	0/0:5,0:5:9:0,9,104	0/0:18,0:18:41.26:0,41,523	0/0:7,0:5:15.03:0,15,190	1/1:5,16:21:46.23:576,46,0	0/1:31,2:33:33.86:34,0,1027	0/0:19,0:16:42.08:0,42,530	0/0:10,0:10:26.01:0,26,347
chr10	99550568	.	CT	C	11758.81	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=0.049;DP=588;FS=9.336;HRun=9;HaplotypeScore=71.4226;InbreedingCoeff=0.9115;MQ=78.70;MQ0=0;MQRankSum=-5.585;QD=21.86;ReadPosRankSum=4.067;VQSLOD=5.4304;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,37:39:84.04:769,84,0	1/1:0,17:17:48.03:439,48,0	0/0:18,0:17:36.70:0,37,411	0/0:15,1:16:1.03:0,1,219	1/1:0,21:21:54.02:494,54,0	1/1:1,17:18:42.02:384,42,0	1/1:4,17:21:48.02:439,48,0	1/1:8,23:31:63.01:576,63,0	1/1:0,17:17:48.03:439,48,0	1/1:3,18:21:53.99:484,54,0	1/1:2,13:15:39:355,39,0	1/1:0,23:23:60.03:549,60,0	1/1:4,21:25:57.02:521,57,0	1/1:0,15:15:42.02:384,42,0	1/1:2,20:22:57.03:522,57,0	1/1:0,14:14:42.02:384,42,0	1/1:3,32:35:84.04:769,84,0	0/0:15,0:15:36.11:0,36,415	1/1:3,19:22:54.01:490,54,0	1/1:2,18:20:41.99:384,42,0	1/1:4,13:17:36.02:330,36,0	1/1:3,15:18:42.01:384,42,0	1/1:2,15:18:35.87:329,36,0	1/1:2,18:20:48.02:439,48,0	1/1:2,19:22:49.84:445,50,0	1/1:3,19:22:54.01:494,54,0	1/1:3,25:28:34.42:569,34,0	1/1:1,16:17:42.02:384,42,0
chr10	99550857	.	A	AT	13604.72	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-7.577;DP=536;FS=8.382;HRun=8;HaplotypeScore=53.3905;InbreedingCoeff=0.9219;MQ=87.31;MQ0=0;MQRankSum=-7.320;QD=28.11;ReadPosRankSum=4.276;VQSLOD=5.0946;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:23:72.21:831,72,0	1/1:2,6:8:12.04:138,12,0	0/0:18,0:18:44.98:0,45,398	0/0:19,0:19:42.82:0,43,384	1/1:2,14:16:42.12:485,42,0	1/1:4,32:35:90.27:1039,90,0	1/1:1,14:15:39.12:450,39,0	1/1:9,31:41:96.08:1065,96,0	1/1:1,17:18:48.14:554,48,0	1/1:2,17:19:51.15:588,51,0	1/1:3,9:13:26.91:291,27,0	1/1:2,11:13:24.54:278,25,0	1/1:3,17:20:48.14:554,48,0	1/1:1,15:16:45.13:519,45,0	1/1:0,21:21:63.19:727,63,0	1/1:1,19:21:57:638,57,0	1/1:1,13:14:39.12:450,39,0	0/0:14,1:15:7.37:0,7,312	1/1:5,22:28:68.96:759,69,0	1/1:2,10:12:27.05:298,27,0	1/1:1,22:23:60.18:692,60,0	1/1:2,11:13:30.09:346,30,0	1/1:1,11:12:26.80:296,27,0	1/1:3,20:23:51.15:589,51,0	1/1:1,16:17:39.12:450,39,0	1/1:4,21:25:35.69:652,36,0	1/1:1,27:29:75.06:845,75,0	1/1:5,2:7:6.02:69,6,0
chr10	99551180	.	GGGA	G	1029.39	PASS	AB=0.833;AC=44;AF=0.846;AN=52;BaseQRankSum=-0.949;DP=165;FS=3.338;HRun=0;HaplotypeScore=36.4627;InbreedingCoeff=0.2393;MQ=33.56;MQ0=14;MQRankSum=0.520;QD=7.51;ReadPosRankSum=2.846;VQSLOD=1.5175;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,1:10:8.73:66,9,0	./.	0/0:10,0:1:3.01:0,3,52	0/0:11,0:2:6.02:0,6,86	1/1:2,1:3:3:25,3,0	1/1:1,0:8:5.61:48,6,0	1/1:2,2:4:2.33:33,2,0	1/1:6,0:4:11.90:84,12,0	1/1:5,3:6:8.50:83,8,0	1/1:2,0:1:2.98:21,3,0	./.	1/1:3,0:2:2.94:18,3,0	1/1:5,1:4:4.10:21,4,0	1/1:4,2:3:2.98:22,3,0	0/1:5,5:10:10.42:38,0,10	1/1:3,1:4:6.43:65,6,0	1/1:2,0:3:3:25,3,0	0/1:6,0:5:5.53:6,0,70	1/1:5,0:4:9:82,9,0	1/1:3,1:4:8.95:71,9,0	1/1:6,1:5:2.50:24,2,0	1/1:4,2:7:7.17:67,7,0	1/1:5,1:7:8.25:76,8,0	1/1:6,2:6:9.01:101,9,0	1/1:4,1:5:2.31:8,2,0	1/1:3,0:5:11.71:76,12,0	1/1:8,0:8:14.63:96,15,0	0/0:1,0:1:2.92:0,3,17
chr10	99551183	.	A	AG	1036.92	PASS	AB=0.893;AC=31;AF=0.646;AN=48;BaseQRankSum=0.090;DP=144;FS=6.102;HRun=3;HaplotypeScore=35.6817;InbreedingCoeff=0.1366;MQ=33.61;MQ0=15;MQRankSum=-0.938;QD=9.78;ReadPosRankSum=2.743;VQSLOD=1.2624;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:7,1:7:31.13:72,0,31	./.	0/0:9,0:1:3.01:0,3,42	0/0:9,0:2:6.02:0,6,82	./.	1/1:7,1:8:5.95:48,6,0	1/1:5,1:4:2.27:17,2,0	0/0:4,0:3:1.12:0,1,7	1/1:6,2:6:7.43:99,7,0	./.	./.	1/1:2,1:2:2.68:11,3,0	1/1:4,2:4:2.26:47,2,0	1/1:4,2:3:3.01:48,3,0	0/1:8,1:9:28.39:85,0,28	1/1:3,1:4:5.77:90,6,0	1/1:1,1:2:3.01:48,3,0	0/0:6,0:4:9.03:0,9,125	1/1:4,2:5:6.57:124,7,0	0/1:3,1:4:26.38:58,0,26	1/1:3,3:5:2.05:46,2,0	0/1:6,1:7:30.14:48,0,30	1/1:3,3:6:8.31:114,8,0	1/1:3,4:6:9.03:126,9,0	0/1:4,0:4:12.78:13,0,17	1/1:3,3:5:6.49:87,6,0	0/0:5,0:5:4.69:0,5,32	0/0:1,0:1:3.01:0,3,38
chr10	99551186	.	A	AG	315.85	PASS	AB=0.922;AC=23;AF=0.479;AN=48;BaseQRankSum=1.607;DP=138;FS=6.357;HRun=1;HaplotypeScore=37.3054;InbreedingCoeff=0.1023;MQ=32.40;MQ0=15;MQRankSum=-0.380;QD=3.55;ReadPosRankSum=1.816;VQSLOD=0.1856;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:8:34.90:41,0,35	./.	0/0:9,0:1:3.01:0,3,42	0/0:9,0:2:6.02:0,6,83	./.	1/1:8,0:8:3.15:13,3,0	1/1:6,0:4:0.60:5,1,0	0/0:3,0:2:3.48:0,3,43	1/1:7,1:6:5.42:34,5,0	./.	./.	0/0:3,0:2:2.88:0,3,15	0/1:4,0:3:0.61:1,0,4	1/1:6,0:3:2.60:10,3,0	0/1:7,2:9:11.57:12,0,35	1/1:2,1:3:4.24:42,4,0	1/1:2,0:2:2.68:11,3,0	0/0:5,0:3:9.03:0,9,124	0/1:5,1:4:17.86:35,0,18	0/1:4,0:4:21.98:22,0,33	0/1:6,0:5:3.57:4,0,35	0/0:5,1:6:0.63:0,1,50	1/1:6,0:6:6.50:39,7,0	1/1:3,2:4:8.64:61,9,0	0/0:3,1:4:3.77:0,4,39	0/1:5,2:6:18:125,0,18	0/0:5,0:5:9.02:0,9,105	0/0:2,0:2:3.01:0,3,42
chr10	99551218	.	GGAA	G	584.13	PASS	AB=1.000;AC=34;AF=0.850;AN=40;BaseQRankSum=-1.920;DP=130;FS=5.382;HRun=0;HaplotypeScore=28.8028;InbreedingCoeff=0.1997;MQ=23.43;MQ0=27;MQRankSum=-0.718;QD=5.96;ReadPosRankSum=-0.117;VQSLOD=1.0131;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,3:8:20.40:167,20,0	1/1:2,0:2:5.86:35,6,0	./.	./.	./.	1/1:8,0:8:12.48:69,12,0	0/1:8,0:5:2.19:30,0,2	1/1:5,1:2:2.41:19,2,0	1/1:6,0:6:8.94:48,9,0	1/1:5,0:2:2.88:15,3,0	1/1:1,0:1:2.92:17,3,0	./.	0/1:2,0:1:0:0,0,0	./.	1/1:8,0:7:0.87:30,1,0	1/1:3,0:2:5.88:36,6,0	1/1:7,0:6:2.93:20,3,0	1/1:6,0:3:3.33:20,3,0	1/1:7,0:4:8.57:57,9,0	./.	1/1:9,0:8:4.12:19,4,0	./.	1/1:3,0:3:5.87:36,6,0	0/0:2,0:2:0.47:0,0,1	1/1:2,0:2:2.84:14,3,0	1/1:6,0:3:5.95:42,6,0	./.	0/0:2,0:2:5.82:0,6,36
chr10	99551397	.	AGG	A	753.55	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.488;DP=299;FS=0.928;HRun=6;HaplotypeScore=45.1939;InbreedingCoeff=0.9068;MQ=78.09;MQ0=0;MQRankSum=-0.944;QD=22.83;ReadPosRankSum=0.218;VQSLOD=0.9033;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.10:0,39,604	0/0:4,0:4:6.01:0,6,80	0/0:17,0:9:15.47:0,15,266	0/0:30,0:26:38.27:0,38,541	1/1:0,7:7:15.05:200,15,0	0/0:10,0:10:21.05:0,21,347	0/0:12,0:12:32.45:0,32,477	0/0:11,0:11:21.06:0,21,324	0/0:4,0:4:12.03:0,12,187	1/1:2,7:9:21.03:236,21,0	1/1:1,4:5:9.03:120,9,0	0/0:7,0:7:21.06:0,21,350	0/0:10,0:10:30.08:0,30,452	0/0:8,0:8:24.08:0,24,426	0/0:8,0:8:21.07:0,21,373	0/0:10,0:10:30.08:0,30,484	0/0:21,0:21:57.17:0,57,964	0/0:11,0:10:27.09:0,27,480	0/0:8,0:7:15.01:0,15,228	0/0:4,0:4:9.03:0,9,150	0/0:22,0:22:49.96:0,50,793	0/0:9,0:9:27.08:0,27,447	0/0:7,0:7:21.05:0,21,293	0/0:10,0:10:30.09:0,30,507	1/1:0,12:12:27.09:351,27,0	0/0:10,0:10:26.94:0,27,393	0/0:13,0:13:39.13:0,39,694	0/0:5,0:5:15.05:0,15,264
chr10	99551628	.	AC	A	2055.68	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.189;DP=568;FS=2.378;HRun=2;HaplotypeScore=60.7901;InbreedingCoeff=0.9865;MQ=86.39;MQ0=0;MQRankSum=-2.122;QD=33.70;ReadPosRankSum=3.092;VQSLOD=3.8070;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.22:0,66,989	0/0:8,0:8:24.08:0,24,359	0/0:19,0:19:30.48:0,30,574	0/0:20,0:20:52.15:0,52,667	0/0:25,0:25:66.19:0,66,948	0/0:21,0:21:63.21:0,63,942	0/0:14,0:14:42.14:0,42,627	0/0:26,0:26:72.23:0,72,1043	0/0:21,0:21:63.18:0,63,902	0/0:29,0:29:81.27:0,81,1185	0/0:16,0:16:45.15:0,45,661	0/0:32,0:32:96.31:0,96,1418	0/0:29,0:29:87.29:0,87,1303	0/0:17,0:17:51.15:0,51,723	0/0:19,0:19:57.19:0,57,851	0/0:24,0:24:72.23:0,72,1058	1/1:0,15:15:45.15:584,45,0	0/0:17,1:18:12.25:0,12,664	0/0:19,0:19:54.12:0,54,745	0/0:8,0:8:24.08:0,24,360	0/0:25,0:25:75.25:0,75,1124	0/0:17,0:17:48.16:0,48,714	0/0:7,0:7:21.07:0,21,315	0/0:16,0:16:48.16:0,48,716	0/0:14,0:14:42.14:0,42,629	1/1:1,28:29:42.30:1030,42,0	0/0:39,0:39:99:0,117,1708	1/1:0,17:17:45.15:584,45,0
chr10	99552172	.	G	GT	2567.93	PASS	AB=0.939;AC=13;AF=0.232;AN=56;BaseQRankSum=-2.211;DP=563;FS=3.557;HRun=10;HaplotypeScore=62.5450;InbreedingCoeff=0.7323;MQ=76.64;MQ0=0;MQRankSum=-0.145;QD=14.67;ReadPosRankSum=0.553;VQSLOD=3.9219;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,33:44:93.07:963,93,0	0/0:4,0:4:11.99:0,12,99	0/0:21,0:19:21.56:0,22,208	0/1:16,0:14:18.56:19,0,91	0/0:21,0:21:47.92:0,48,394	1/1:4,23:27:63.16:672,63,0	0/0:18,0:18:53.89:0,54,434	0/0:19,0:19:29.89:0,30,235	0/0:16,0:17:40.95:0,41,326	0/0:18,0:18:44.94:0,45,369	0/0:15,0:15:32.92:0,33,268	0/0:20,0:20:41.89:0,42,341	0/0:17,0:18:43.94:0,44,345	0/0:16,0:16:44.95:0,45,369	0/0:31,1:33:54.70:0,55,580	0/0:14,0:14:32.94:0,33,271	1/1:3,21:24:38.52:615,39,0	0/0:17,0:17:47.94:0,48,394	0/1:15,2:17:5.06:5,0,170	0/0:31,0:33:75.74:0,76,639	0/0:20,0:22:51.95:0,52,400	0/0:33,0:33:83.83:0,84,684	0/0:17,1:19:14.99:0,15,318	0/1:11,1:12:5.04:5,0,170	0/0:13,0:13:29.95:0,30,246	1/1:24,0:24:60.54:322,61,0	0/0:17,0:17:41.82:0,42,333	1/1:11,0:11:23.59:148,24,0
chr10	99552179	.	T	TA	1294.20	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=5.074;DP=564;FS=0.392;HRun=0;HaplotypeScore=65.3022;InbreedingCoeff=0.4459;MQ=80.81;MQ0=0;MQRankSum=-2.429;QD=8.99;ReadPosRankSum=3.927;VQSLOD=3.5161;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:41:75.72:76,0,89	0/0:5,0:5:15.04:0,15,194	0/0:25,0:23:56.90:0,57,614	0/1:18,0:16:2.28:2,0,265	0/0:20,0:20:60.12:0,60,768	0/1:27,0:27:29.37:60,0,29	0/0:22,0:22:66.18:0,66,857	0/0:17,0:17:38.63:0,39,500	0/0:18,0:18:54.08:0,54,669	0/0:18,0:18:51.16:0,51,683	0/0:14,0:14:42.12:0,42,541	0/0:21,0:21:63.14:0,63,770	0/0:17,0:17:51.08:0,51,654	0/0:16,0:16:48.15:0,48,655	0/0:31,0:31:91.45:0,91,1174	0/0:15,0:15:42.12:0,42,541	0/1:24,0:24:46.82:62,0,47	0/0:18,0:18:54.14:0,54,716	0/0:14,0:14:34.32:0,34,434	0/0:32,0:32:96.21:0,96,1238	0/0:21,0:21:63.04:0,63,783	0/0:34,0:34:99:0,99,1285	0/0:17,0:17:44.90:0,45,626	0/0:14,0:14:32.88:0,33,430	0/0:13,0:13:39.09:0,39,492	1/1:0,22:22:66.20:903,66,0	0/0:18,0:18:54.14:0,54,689	1/1:2,10:12:24.07:334,24,0
chr10	99552430	.	A	AT	2514.98	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-5.819;DP=549;FS=0.000;HRun=8;HaplotypeScore=53.8094;InbreedingCoeff=0.9347;MQ=64.45;MQ0=0;MQRankSum=-0.311;QD=27.94;ReadPosRankSum=1.687;VQSLOD=3.9988;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:37.31:0,37,497	0/0:13,0:13:36.01:0,36,329	0/0:9,0:7:11.90:0,12,99	0/0:11,0:10:1.82:0,2,86	1/1:2,26:28:78.23:900,78,0	0/0:18,0:18:42.01:0,42,384	0/0:13,0:13:27.01:0,27,247	0/0:33,0:34:59.02:0,59,525	0/0:15,0:15:36:0,36,325	1/1:5,19:24:60.17:681,60,0	1/1:3,18:21:51.11:574,51,0	0/0:16,0:16:48.03:0,48,439	0/0:15,0:15:45.01:0,45,406	0/0:14,0:14:39.02:0,39,357	0/0:13,0:13:29.99:0,30,268	0/0:24,0:24:60.02:0,60,549	0/0:30,0:30:72.03:0,72,659	0/0:11,0:11:24.01:0,24,218	0/0:30,0:30:78.02:0,78,710	0/0:25,0:25:63.01:0,63,572	0/0:23,0:23:63.03:0,63,577	0/0:24,0:24:69.04:0,69,632	0/0:18,0:18:51.03:0,51,467	0/0:13,0:13:39:0,39,350	1/1:2,15:17:45.13:519,45,0	0/0:38,0:38:99:0,102,930	0/0:20,0:20:48.02:0,48,439	0/0:9,0:9:24.01:0,24,220
chr10	99552595	.	C	CGACCAT	9207.14	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-8.888;DP=655;FS=3.692;HRun=0;HaplotypeScore=133.4901;InbreedingCoeff=0.9987;MQ=60.32;MQ0=0;MQRankSum=-14.205;QD=80.06;ReadPosRankSum=2.414;VQSLOD=5.6800;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:84.29:0,84,1850	0/0:8,0:8:21.07:0,21,480	0/0:23,0:23:54.17:0,54,1156	0/0:15,0:15:39.06:0,39,694	1/1:5,26:32:60.21:2080,60,0	0/0:23,0:23:66.22:0,66,1441	0/0:14,0:14:39.12:0,39,806	0/0:31,0:31:75.25:0,75,1541	0/0:16,0:16:48.15:0,48,1054	1/1:3,30:34:87.27:2835,87,0	1/1:3,24:28:75.26:2534,75,0	0/0:10,0:10:30.10:0,30,640	0/0:22,0:22:54.19:0,54,1191	0/0:22,0:22:60.19:0,60,1308	0/0:25,0:25:72.25:0,72,1628	0/0:24,0:24:66.23:0,66,1507	0/0:32,0:32:90.31:0,90,2029	0/0:16,0:16:42.14:0,42,959	0/0:25,0:25:72.24:0,72,1517	0/0:25,0:25:63.22:0,63,1436	0/0:31,0:31:84.27:0,84,1840	0/0:19,0:19:54.16:0,54,1085	0/0:20,0:20:57.18:0,57,1210	0/0:25,0:25:72.25:0,72,1643	1/1:2,18:21:51.18:1758,51,0	0/0:33,0:33:39.48:0,39,2031	0/0:30,0:28:84.29:0,84,1831	0/0:18,0:18:51.18:0,51,1165
chr10	99553243	.	GAT	G	960.76	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=7.137;DP=183;FS=12.593;HRun=0;HaplotypeScore=28.4237;InbreedingCoeff=0.5001;MQ=99.79;MQ0=1;MQRankSum=-1.581;QD=29.11;ReadPosRankSum=0.807;VQSLOD=3.7691;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:3.01:0,3,51	0/0:2,0:2:6.02:0,6,102	0/0:18,0:14:11.97:0,12,132	0/0:17,0:13:0.49:0,0,40	0/0:6,0:6:18.06:0,18,298	0/0:15,0:15:45.15:0,45,765	0/0:1,0:1:3.01:0,3,51	0/0:34,0:34:87.29:0,87,1441	0/0:5,0:5:15.05:0,15,255	0/0:3,0:3:6.02:0,6,102	0/0:2,0:2:6.02:0,6,102	0/0:1,0:1:3.01:0,3,51	0/0:2,0:2:6.02:0,6,102	./.	0/0:2,0:2:6.02:0,6,102	0/0:2,0:2:6.02:0,6,102	1/1:2,17:19:48.16:624,48,0	0/0:11,0:11:33.11:0,33,561	0/0:10,0:11:23.72:0,24,395	0/0:4,0:4:9.03:0,9,153	0/0:2,0:2:3.01:0,3,51	./.	0/0:1,0:1:3.01:0,3,51	0/0:2,0:2:6.02:0,6,102	0/0:3,0:3:9.03:0,9,153	1/1:0,5:5:15.05:195,15,0	0/0:3,0:3:9.03:0,9,153	1/1:2,7:9:21.07:273,21,0
chr10	99554862	.	G	GCA	453.41	PASS	AB=0.901;AC=20;AF=0.370;AN=54;BaseQRankSum=5.628;DP=427;FS=32.290;HRun=0;HaplotypeScore=105.7148;InbreedingCoeff=0.0754;MQ=32.35;MQ0=3;MQRankSum=-4.892;QD=1.87;ReadPosRankSum=-1.275;VQSLOD=0.4632;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:23.66:0,24,325	0/0:14,0:14:4.55:0,5,54	0/0:10,0:3:3.01:0,3,40	0/0:12,0:7:21.07:0,21,319	0/1:13,4:17:3.18:3,0,39	1/1:8,1:9:1.97:6,2,0	0/1:10,2:11:6.53:7,0,41	0/0:21,0:12:19.29:0,19,210	0/1:8,2:9:0.03:0,0,0	0/1:22,5:26:99:274,0,276	0/1:19,0:19:0.64:1,0,42	0/1:15,1:16:17.29:17,0,93	0/0:20,0:19:11.52:0,12,197	1/1:15,0:15:7.42:31,7,0	1/1:24,1:25:4.06:12,4,0	0/0:15,0:15:1.72:0,2,4	0/1:12,1:13:31.11:31,0,206	0/0:9,0:9:23.97:0,24,252	0/1:16,0:16:24.65:25,0,277	0/0:17,3:19:2.36:0,2,65	0/0:6,0:6:0:0,0,0	1/1:6,2:8:3.85:12,4,0	1/1:15,1:16:5.12:15,5,0	0/0:18,2:20:4.32:0,4,86	0/0:13,1:14:6.91:0,7,84	0/1:22,3:24:99:150,0,552	0/1:12,1:13:12.83:13,0,146	./.
chr10	99554864	.	G	GCA	430.88	PASS	AB=0.952;AC=19;AF=0.352;AN=54;BaseQRankSum=5.158;DP=433;FS=31.756;HRun=0;HaplotypeScore=106.0359;InbreedingCoeff=0.1006;MQ=32.53;MQ0=3;MQRankSum=-4.982;QD=1.84;ReadPosRankSum=-0.881;VQSLOD=-0.0293;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:23.66:0,24,329	0/0:13,1:14:8.13:0,8,67	0/0:11,0:3:3.01:0,3,41	0/0:12,0:7:21.07:0,21,330	0/1:17,0:17:0.31:0,0,56	1/1:9,0:9:1.97:6,2,0	0/0:13,0:12:6.02:0,6,89	0/1:19,2:12:29.30:29,0,239	0/1:9,1:9:0.03:0,0,0	0/1:24,3:26:99:256,0,354	0/0:19,0:19:2.44:0,2,83	0/1:16,1:17:23.50:24,0,90	0/0:18,2:19:23.13:0,23,303	1/1:14,1:15:7.32:50,7,0	1/1:24,1:25:3.84:12,4,0	0/0:15,1:16:2.92:0,3,8	1/1:14,0:14:7.47:49,7,0	0/0:9,0:9:24.04:0,24,290	0/1:15,1:16:45.93:46,0,359	0/0:20,1:20:2.26:0,2,87	0/0:6,0:6:0:0,0,0	1/1:8,0:8:3.85:12,4,0	0/1:16,0:16:6.74:7,0,36	0/0:20,0:20:4.32:0,4,89	0/0:12,2:14:7.84:0,8,87	0/1:25,1:24:72.59:73,0,552	0/1:13,0:13:12.54:13,0,158	./.
chr10	99556471	.	G	GT	2743.39	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=-0.586;DP=246;FS=2.997;HRun=1;HaplotypeScore=118.1685;InbreedingCoeff=0.4300;MQ=38.76;MQ0=0;MQRankSum=-2.434;QD=11.38;ReadPosRankSum=0.088;VQSLOD=1.8515;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,11:13:19.56:92,20,0	1/1:0,4:3:5.72:33,6,0	0/0:1,0:1:2.88:0,3,15	0/0:2,0:2:2.68:0,3,11	1/1:1,7:8:5.51:30,6,0	1/1:2,7:6:14.61:106,15,0	1/1:2,2:4:5.59:26,6,0	1/1:1,10:9:26.73:204,27,0	1/1:2,7:9:23.24:144,23,0	1/1:1,8:7:20.74:141,21,0	1/1:1,4:4:5.49:24,5,0	1/1:1,10:9:17.20:111,17,0	1/1:0,11:10:22.67:165,23,0	1/1:0,13:7:19.88:117,20,0	1/1:3,17:18:52.36:409,52,0	1/1:0,10:9:23:143,23,0	1/1:2,15:16:34.19:214,34,0	1/1:1,8:7:20.68:162,21,0	1/1:2,4:6:11.90:100,12,0	1/1:1,8:7:17.21:111,17,0	./.	1/1:1,7:6:5.64:31,6,0	1/1:0,7:6:8.26:42,8,0	1/1:0,5:5:3.27:14,3,0	1/1:1,12:11:7.10:29,7,0	1/1:2,8:9:26.64:179,27,0	1/1:1,16:17:31.64:177,32,0	1/1:0,3:2:5.92:39,6,0
chr10	99556651	.	G	GT	5087	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-6.208;DP=614;FS=12.624;HRun=9;HaplotypeScore=65.4720;InbreedingCoeff=0.9038;MQ=45.83;MQ0=29;MQRankSum=1.640;QD=13.98;ReadPosRankSum=-0.601;VQSLOD=3.1726;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:23.96:0,24,208	1/1:9,7:13:20.97:205,21,0	0/0:9,0:3:2.99:0,3,24	0/0:12,0:1:3:0,3,26	0/0:29,0:29:20.97:0,21,182	0/0:23,0:22:23.90:0,24,208	1/1:8,14:20:1.09:213,1,0	1/1:22,14:19:17.96:164,18,0	1/1:4,11:13:24.01:252,24,0	0/0:18,0:17:26.92:0,27,227	0/0:18,0:18:17.97:0,18,156	1/1:3,21:22:39.10:425,39,0	1/1:6,12:14:26.94:299,27,0	1/1:8,10:16:15.04:166,15,0	1/1:3,23:23:41.21:463,41,0	1/1:7,18:24:13.05:370,13,0	0/0:28,0:27:41.95:0,42,362	0/0:26,0:24:47.97:0,48,413	1/1:15,16:24:42.11:464,42,0	1/1:9,16:21:15.94:364,16,0	1/1:8,10:17:26.83:285,27,0	1/1:7,11:18:21.02:219,21,0	1/1:4,11:12:23.98:238,24,0	1/1:2,23:24:30.08:332,30,0	0/0:21,0:21:14.94:0,15,130	0/0:20,0:20:38.82:0,39,322	1/1:2,29:30:56.57:630,57,0	0/0:19,0:19:32.99:0,33,286
chr10	99557311	.	G	GA	884.48	PASS	AB=0.692;AC=10;AF=0.185;AN=54;BaseQRankSum=2.355;DP=536;FS=79.080;HRun=1;HaplotypeScore=72.9100;InbreedingCoeff=0.6520;MQ=69.88;MQ0=13;MQRankSum=-7.843;QD=22.11;ReadPosRankSum=-1.632;VQSLOD=-0.5005;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:39.13:0,39,505	0/0:15,0:15:42.14:0,42,544	0/0:11,0:10:30.09:0,30,370	0/0:21,0:18:54.17:0,54,690	1/1:1,8:8:24.08:358,24,0	./.	0/0:13,0:12:36.12:0,36,466	0/0:36,0:34:99:0,102,1323	0/0:28,0:28:72.23:0,72,932	0/1:5,4:9:99:155,0,131	0/1:5,4:6:22.92:164,0,23	0/0:32,0:31:72.23:0,72,924	0/0:25,0:23:60.60:0,61,811	0/0:31,0:29:69.22:0,69,893	0/0:18,0:18:51.17:0,51,660	0/0:22,0:21:51.17:0,51,660	0/0:13,0:12:33.11:0,33,428	0/0:31,0:31:87.25:0,87,1111	0/0:22,0:20:60.19:0,60,778	0/0:33,0:33:96.24:0,96,1223	0/0:38,0:37:96.31:0,96,1245	0/0:18,0:18:29.94:0,30,389	0/0:26,0:25:60.19:0,60,773	0/0:12,0:12:36.12:0,36,467	1/1:1,7:8:18.06:269,18,0	1/1:3,1:1:3.01:45,3,0	0/0:33,0:32:84.27:0,84,1088	1/1:0,1:1:3.01:45,3,0
chr10	99557409	.	TCAAA	T	676.33	PASS	AB=0.944;AC=9;AF=0.180;AN=50;BaseQRankSum=6.521;DP=652;FS=56.615;HRun=0;HaplotypeScore=62.2327;InbreedingCoeff=0.2433;MQ=24.57;MQ0=245;MQRankSum=-4.775;QD=3.54;ReadPosRankSum=0.634;VQSLOD=-0.6436;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,10:16:24.03:386,24,0	0/0:13,0:7:15.01:0,15,331	./.	./.	0/0:29,0:11:21.02:0,21,451	./.	0/0:19,0:5:9.03:0,9,239	0/0:41,0:12:33.11:0,33,863	0/1:32,1:12:43.71:44,0,226	0/1:26,2:14:72.61:73,0,773	0/0:17,0:9:12.04:0,12,318	0/0:24,0:17:21.07:0,21,545	0/1:17,1:7:43.72:44,0,225	0/0:24,0:10:5.91:0,6,159	0/0:23,0:12:11.97:0,12,258	0/0:21,0:13:21.07:0,21,557	1/1:16,4:7:9.03:146,9,0	0/1:24,3:19:93.65:94,0,241	0/0:28,0:8:24.08:0,24,623	0/0:17,0:10:15.05:0,15,374	0/0:24,4:12:0.47:0,0,1	0/0:22,0:7:12:0,12,251	0/0:27,0:10:18.06:0,18,477	0/0:23,0:8:12.04:0,12,267	0/0:26,0:12:15.01:0,15,339	0/0:22,1:6:18.06:0,18,319	0/1:28,1:15:31.82:32,0,534	0/0:13,0:6:5.65:0,6,112
chr10	99558646	.	CGTGTGTGTGTGTGTGTGTGTGTGTGT	C	2546.12	PASS	AB=0.733;AC=10;AF=0.185;AN=54;BaseQRankSum=5.510;DP=611;FS=1.727;HRun=0;HaplotypeScore=338.9129;InbreedingCoeff=0.5909;MQ=59.99;MQ0=11;MQRankSum=-5.545;QD=26.80;ReadPosRankSum=-2.643;VQSLOD=0.8596;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:50.71:0,51,4378	0/0:8,0:7:9.50:0,10,761	0/0:33,0:16:3.01:0,3,114	./.	1/1:10,4:14:3.01:202,3,0	0/0:14,0:14:11.87:0,12,1148	0/0:28,0:30:45.14:0,45,3046	0/0:22,0:22:24.06:0,24,973	0/0:27,0:27:57.64:0,58,4276	1/1:16,8:25:20.80:1019,21,0	1/1:4,7:11:17.68:1186,18,0	0/0:15,0:25:11.97:0,12,1278	0/0:22,0:29:31.84:0,32,2002	0/0:16,0:16:32.98:0,33,3338	0/0:21,0:22:45.15:0,45,4123	0/0:25,0:25:54.15:0,54,3930	0/0:18,0:25:39.13:0,39,3579	0/0:16,0:15:33.11:0,33,2463	0/0:15,0:16:15.01:0,15,869	0/0:16,0:17:27.08:0,27,2536	0/0:49,0:50:72.65:0,73,5286	0/0:8,0:8:15.05:0,15,1501	0/0:19,0:21:39.13:0,39,3647	0/0:27,0:28:49.56:0,50,4732	1/1:4,3:7:3.01:202,3,0	0/1:21,0:26:38.12:38,0,950	0/0:19,0:18:36.12:0,36,3197	0/1:5,0:9:47.51:48,0,195
chr10	99560443	.	CA	C	10457.37	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-8.527;DP=702;FS=7.522;HRun=8;HaplotypeScore=83.9153;InbreedingCoeff=0.9977;MQ=76.31;MQ0=0;MQRankSum=-2.668;QD=24.26;ReadPosRankSum=0.616;VQSLOD=5.3289;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:0,0:16:43.13:0,43,219	1/1:0,6:6:15.02:145,15,0	0/0:14,0:14:33.06:0,33,371	0/0:13,0:13:32.12:0,32,323	0/0:3,0:29:68.99:0,69,353	0/0:4,0:29:57.50:0,58,292	1/1:2,27:29:78.12:753,78,0	1/1:3,23:26:69.10:666,69,0	1/1:0,17:17:42.07:406,42,0	0/0:3,0:33:86.05:0,86,436	0/0:3,0:20:45.92:0,46,232	1/1:3,22:25:60.09:579,60,0	1/1:2,29:31:77.81:753,78,0	1/1:2,18:20:42.06:406,42,0	1/1:4,31:35:90.14:869,90,0	1/1:6,27:33:75.11:724,75,0	0/0:6,0:27:63.32:0,63,337	0/0:26,0:26:75.21:0,75,892	1/1:0,22:22:66.11:637,66,0	1/1:3,32:35:96.15:927,96,0	1/1:2,20:22:54.08:522,54,0	1/1:4,28:32:72.10:695,72,0	1/1:4,33:37:96.15:927,96,0	1/1:0,22:22:57.09:551,57,0	0/0:0,0:20:57.47:0,57,292	0/0:27,1:30:45.98:0,46,798	1/1:4,35:39:93.14:898,93,0	0/0:14,0:14:42.12:0,42,498
chr10	99561915	.	GA	G	182.04	PASS	AB=0.809;AC=3;AF=0.054;AN=56;BaseQRankSum=5.794;DP=401;FS=4.881;HRun=2;HaplotypeScore=76.5691;InbreedingCoeff=-0.0676;MQ=89.82;MQ0=0;MQRankSum=-4.175;QD=2.64;ReadPosRankSum=-0.119;VQSLOD=-0.5203;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:30.10:0,30,475	0/0:3,0:3:9.03:0,9,144	0/0:28,0:23:66.58:0,67,980	0/0:30,0:21:64.54:0,65,768	0/0:9,3:12:18.05:0,18,286	0/0:15,1:16:4.71:0,5,584	0/0:8,0:8:21.07:0,21,335	0/0:23,0:21:57.19:0,57,908	0/0:8,0:8:24.08:0,24,383	0/1:21,4:25:65.97:66,0,897	0/0:15,5:20:19.63:0,20,486	0/0:13,0:13:39.13:0,39,617	0/0:15,0:15:42.13:0,42,644	0/0:7,0:7:21.07:0,21,336	0/0:12,0:12:30.10:0,30,475	0/0:11,0:11:33.11:0,33,527	0/0:11,0:11:33.11:0,33,516	0/0:8,0:8:24.08:0,24,383	0/0:9,0:9:27.09:0,27,417	0/0:11,0:11:27.09:0,27,428	0/0:14,0:14:39.13:0,39,615	0/0:11,0:11:29.56:0,30,477	0/0:8,0:8:18.06:0,18,283	0/0:14,0:14:27.07:0,27,392	0/1:29,7:36:99:112,0,964	0/0:16,1:17:9.33:0,9,698	0/0:9,0:9:27.09:0,27,430	0/1:5,3:8:99:104,0,143
chr10	99563548	.	G	GA	4346.63	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.355;DP=666;FS=3.472;HRun=8;HaplotypeScore=76.5759;InbreedingCoeff=0.9989;MQ=84.39;MQ0=0;MQRankSum=-0.951;QD=22.41;ReadPosRankSum=4.871;VQSLOD=5.3370;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:32:68.35:366,68,0	0/0:13,0:13:39.02:0,39,357	0/0:20,0:20:29.83:0,30,272	0/0:24,0:25:44.56:0,45,428	1/1:3,24:27:69.20:796,69,0	1/1:4,1:32:68.18:346,68,0	0/0:16,0:16:42.02:0,42,384	0/0:39,0:39:99:0,99,903	0/0:14,0:14:39.02:0,39,357	1/1:5,24:29:72.20:816,72,0	1/1:4,22:27:69.04:776,69,0	0/0:12,0:12:24:0,24,220	0/0:20,0:20:41.98:0,42,380	0/0:19,0:19:42:0,42,378	0/0:28,0:28:75.03:0,75,686	0/0:17,0:17:51.03:0,51,466	1/1:2,22:24:54.16:623,54,0	0/0:27,0:27:75.04:0,75,686	0/0:27,0:27:69.02:0,69,628	0/0:28,0:28:72:0,72,650	0/0:18,0:18:48.03:0,48,439	0/0:26,0:26:63.02:0,63,577	0/0:23,0:23:63.03:0,63,577	0/0:22,0:22:54.02:0,54,494	1/1:4,19:23:54.16:623,54,0	0/0:23,1:24:22.40:0,22,460	0/0:36,0:36:89.98:0,90,808	0/0:18,0:18:47.93:0,48,424
chr10	99564496	.	TA	T	880.05	PASS	AB=0.964;AC=4;AF=0.071;AN=56;BaseQRankSum=7.211;DP=605;FS=2.083;HRun=8;HaplotypeScore=64.0142;InbreedingCoeff=0.4002;MQ=66.99;MQ0=0;MQRankSum=-0.191;QD=13.14;ReadPosRankSum=0.322;VQSLOD=3.2039;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.19:0,81,950	0/0:5,0:5:12.04:0,12,143	0/1:12,1:11:14.64:15,0,224	0/1:14,0:14:23.09:23,0,149	0/0:28,0:28:66.20:0,66,796	0/0:19,1:20:25.17:0,25,563	0/0:17,0:17:45.14:0,45,544	0/0:26,0:26:60.18:0,60,724	0/0:12,0:12:36.09:0,36,422	0/0:34,0:34:96.29:0,96,1160	0/0:22,0:22:63.18:0,63,749	0/0:21,0:21:54.15:0,54,631	0/0:19,0:19:51.15:0,51,611	0/0:20,0:20:54.17:0,54,652	0/0:16,0:16:45.14:0,45,544	0/0:14,0:14:36.11:0,36,435	1/1:0,39:39:99:956,99,0	0/0:28,0:28:84.24:0,84,1001	0/0:23,0:23:63.17:0,63,740	0/0:28,0:28:81.25:0,81,978	0/0:11,0:11:24.07:0,24,290	0/0:30,0:30:84.26:0,84,1014	0/0:23,0:23:66.20:0,66,787	0/0:19,0:19:51.16:0,51,616	0/0:32,0:32:81.25:0,81,978	0/0:26,0:26:66.19:0,66,787	0/0:25,0:25:66.20:0,66,796	0/0:9,1:10:1.12:0,1,273
chr10	99565831	.	G	GA	2255.03	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-3.648;DP=428;FS=38.774;HRun=0;HaplotypeScore=103.7004;InbreedingCoeff=0.6099;MQ=90.31;MQ0=0;MQRankSum=0.787;QD=28.91;ReadPosRankSum=10.022;VQSLOD=0.7864;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,41:46:99:1635,114,0	0/0:4,0:4:5.92:0,6,39	0/0:27,0:28:66.80:0,67,802	0/0:15,0:15:24.64:0,25,392	0/0:11,0:11:23.85:0,24,214	1/1:0,20:20:57.07:740,57,0	0/0:19,0:19:20.92:0,21,224	0/0:19,0:19:43.02:0,43,329	0/0:16,0:16:15.15:0,15,183	0/0:13,0:13:24.66:0,25,220	0/0:17,0:17:25.06:0,25,237	0/0:10,0:10:14.86:0,15,106	0/0:11,0:11:24.01:0,24,149	0/0:22,0:22:20.56:0,21,189	0/0:19,0:20:1.73:0,2,105	0/0:18,0:18:35:0,35,252	0/0:13,0:13:26.42:0,26,161	0/0:9,0:9:21.01:0,21,254	0/0:14,0:14:29.87:0,30,249	0/0:12,0:12:17.63:0,18,126	0/1:12,0:12:1.62:2,0,20	0/0:9,0:9:12.47:0,12,87	0/0:10,0:10:8.54:0,9,71	0/0:18,0:18:30.05:0,30,173	0/0:16,0:16:2.46:0,2,107	0/0:11,0:11:12.68:0,13,77	0/0:12,0:12:16.45:0,16,141	0/0:3,0:3:5.96:0,6,45
chr10	99565907	.	TA	T	18240.46	PASS	AB=0.838;AC=54;AF=0.964;AN=56;BaseQRankSum=1.907;DP=578;FS=0.000;HRun=1;HaplotypeScore=162.7471;InbreedingCoeff=-0.0377;MQ=75.26;MQ0=0;MQRankSum=-6.807;QD=31.56;ReadPosRankSum=2.516;VQSLOD=4.5138;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,10:43:99:1472,120,0	1/1:8,3:11:33.05:411,33,0	0/1:18,3:21:80.83:81,0,181	0/1:9,3:12:69.08:85,0,69	1/1:11,6:17:45.05:565,45,0	1/1:15,7:22:66.14:775,66,0	1/1:10,8:18:54.14:684,54,0	1/1:2,21:23:69.13:801,69,0	1/1:16,4:20:60.16:771,60,0	1/1:12,14:26:78.13:967,78,0	1/1:8,6:14:17.31:457,17,0	1/1:15,6:21:54.22:731,54,0	1/1:16,15:31:90.18:1045,90,0	1/1:14,14:28:80.21:889,80,0	1/1:17,8:25:69.16:850,69,0	1/1:8,12:20:60.12:690,60,0	1/1:4,14:18:32.90:272,33,0	1/1:8,5:13:36.06:445,36,0	1/1:14,17:31:87.17:1107,87,0	1/1:18,11:29:84.09:983,84,0	1/1:17,7:24:50.03:524,50,0	1/1:12,7:19:52.89:637,53,0	1/1:7,9:16:47.83:491,48,0	1/1:8,6:14:36.02:410,36,0	1/1:12,5:17:51.03:622,51,0	1/1:14,8:22:60.04:735,60,0	1/1:6,10:16:44.88:493,45,0	1/1:7,0:7:17.97:249,18,0
chr10	99565910	.	AC	A	6140.60	PASS	AB=1.000;AC=52;AF=0.929;AN=56;BaseQRankSum=2.977;DP=594;FS=9.055;HRun=1;HaplotypeScore=208.4188;InbreedingCoeff=0.4417;MQ=74.21;MQ0=0;MQRankSum=-4.520;QD=10.72;ReadPosRankSum=8.486;VQSLOD=2.1823;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:42,1:43:99:574,107,0	1/1:12,0:12:33.93:185,34,0	0/0:21,0:21:12.05:0,12,262	0/1:11,0:11:21.01:21,0,92	1/1:17,0:17:33.94:203,34,0	1/1:24,0:24:56.50:267,56,0	1/1:18,0:18:14.43:120,14,0	1/1:23,0:23:20.34:224,20,0	1/1:20,0:20:37.58:240,38,0	1/1:27,0:27:59.60:293,60,0	0/1:16,0:16:7.42:108,0,7	1/1:20,0:21:34.70:240,35,0	1/1:31,0:31:76.11:329,76,0	1/1:29,0:29:57.39:271,57,0	1/1:26,0:26:30.74:244,31,0	1/1:22,0:22:50.46:228,50,0	1/1:19,0:19:28.04:143,28,0	1/1:13,0:13:29.79:167,30,0	1/1:31,1:32:64.89:330,65,0	1/1:28,0:28:73.03:371,73,0	1/1:25,1:26:54.41:304,54,0	1/1:20,0:20:35.82:231,36,0	1/1:16,0:16:22.72:193,23,0	1/1:15,0:14:16.32:99,16,0	1/1:16,0:16:43.62:228,44,0	1/1:22,1:23:35.38:256,35,0	1/1:17,1:18:11.69:157,12,0	1/1:6,1:7:20.29:113,20,0
chr10	99565911	.	C	CA	20698.25	PASS	AB=1.000;AC=54;AF=0.964;AN=56;BaseQRankSum=0.993;DP=605;FS=0.000;HRun=1;HaplotypeScore=159.7977;InbreedingCoeff=-0.0372;MQ=75.16;MQ0=0;MQRankSum=-6.657;QD=34.21;ReadPosRankSum=2.442;VQSLOD=4.4699;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,10:43:99:1720,123,0	1/1:9,3:12:36.09:488,36,0	0/1:23,0:23:90.47:90,0,133	0/1:11,0:11:39.05:39,0,42	1/1:13,6:19:45.12:616,45,0	1/1:17,8:25:72.22:967,72,0	1/1:12,6:18:51.06:635,51,0	1/1:3,20:23:66.17:819,66,0	1/1:16,4:20:57.10:794,57,0	1/1:12,16:28:84.26:1148,84,0	1/1:11,4:16:21.88:544,22,0	1/1:16,5:21:45.95:822,46,0	1/1:17,15:32:90.25:1140,90,0	1/1:15,14:29:84.83:1005,85,0	1/1:17,9:26:69.21:951,69,0	1/1:12,11:23:66.07:780,66,0	1/1:3,17:20:39.06:430,39,0	1/1:9,5:14:36.04:457,36,0	1/1:18,15:33:90.27:1240,90,0	1/1:17,11:28:81.25:1090,81,0	1/1:19,7:26:60.19:820,60,0	1/1:13,7:20:56.52:722,57,0	1/1:6,10:16:42.13:553,42,0	1/1:9,6:14:36.07:448,36,0	1/1:11,5:16:48.15:671,48,0	1/1:15,9:24:63.14:833,63,0	1/1:11,6:17:50.93:563,51,0	1/1:7,0:7:21.07:312,21,0
chr10	99565991	.	GA	G	1214.24	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.761;DP=661;FS=0.000;HRun=4;HaplotypeScore=93.4202;InbreedingCoeff=0.9985;MQ=78.71;MQ0=0;MQRankSum=-1.524;QD=27.60;ReadPosRankSum=1.622;VQSLOD=2.9355;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,147,2020	0/0:12,0:12:36.09:0,36,483	0/0:16,0:16:45.06:0,45,562	0/0:29,0:29:72.23:0,72,988	0/0:13,0:13:39.07:0,39,505	0/0:27,0:27:81.27:0,81,1134	0/0:27,0:27:81.27:0,81,1132	0/0:29,0:29:87.28:0,87,1188	0/0:27,0:27:81.27:0,81,1132	0/0:27,0:27:75.25:0,75,1038	0/0:19,0:19:54.17:0,54,736	0/0:24,0:24:69.18:0,69,917	0/0:23,0:23:66.19:0,66,898	0/0:26,0:26:69.19:0,69,929	0/0:32,0:32:93.30:0,93,1286	0/0:20,0:20:60.17:0,60,804	1/1:1,43:44:99:1309,114,0	0/0:20,0:20:60.17:0,60,819	0/0:24,0:24:63.15:0,63,843	0/0:17,0:17:51.17:0,51,714	0/0:30,0:30:78.19:0,78,1030	0/0:11,0:11:33.11:0,33,461	0/0:21,0:21:60.11:0,60,795	0/0:22,0:22:66.18:0,66,900	0/0:15,0:15:42.10:0,42,557	0/0:23,0:23:69.22:0,69,937	0/0:23,0:23:69.22:0,69,948	0/0:9,0:9:27.07:0,27,360
chr10	99566537	.	A	AAAAC	14629.80	PASS	AB=0.600;AC=43;AF=0.768;AN=56;BaseQRankSum=-5.847;DP=651;FS=1.663;HRun=0;HaplotypeScore=120.3661;InbreedingCoeff=0.8768;MQ=56.75;MQ0=5;MQRankSum=-0.441;QD=30.80;ReadPosRankSum=-0.798;VQSLOD=4.7556;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:55.15:0,55,1209	1/1:0,7:7:17.98:375,18,0	0/0:36,0:17:18.05:0,18,246	0/0:44,0:22:11.63:0,12,141	1/1:19,0:25:27:418,27,0	0/0:23,0:23:45.14:0,45,694	1/1:6,15:23:22.15:447,22,0	1/1:31,5:39:35.99:499,36,0	1/1:3,12:15:33.11:788,33,0	1/1:20,0:22:30.07:493,30,0	1/1:15,0:28:45.06:702,45,0	1/1:7,8:16:21.07:502,21,0	1/1:6,5:11:12.04:286,12,0	1/1:7,13:20:24.08:573,24,0	1/1:8,7:15:18.06:430,18,0	1/1:10,13:24:36.12:860,36,0	0/0:7,0:18:30.02:0,30,275	0/0:16,0:16:27.04:0,27,358	1/1:8,5:13:15.05:358,15,0	1/1:8,22:30:60.68:1371,61,0	1/1:12,12:24:33.11:789,33,0	1/1:9,11:22:33.11:731,33,0	1/1:12,13:25:30.10:717,30,0	1/1:6,8:14:21.07:502,21,0	1/1:9,0:28:57.19:995,57,0	1/1:12,13:25:42.10:846,42,0	0/1:8,16:24:56.45:742,0,56	1/1:3,16:23:51.18:1204,51,0
chr10	99568092	.	A	AG	6757.51	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=13.027;DP=621;FS=24.578;HRun=0;HaplotypeScore=174.9221;InbreedingCoeff=0.9759;MQ=49.23;MQ0=32;MQRankSum=-10.394;QD=14.44;ReadPosRankSum=4.547;VQSLOD=4.2325;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,16:20:26.86:226,27,0	1/1:2,6:7:17.27:116,17,0	0/0:32,0:14:25.38:0,25,312	0/0:37,0:13:21.86:0,22,256	0/0:22,0:22:66.20:0,66,889	1/1:9,10:19:43.02:270,43,0	1/1:7,9:13:20.10:185,20,0	1/1:31,15:42:95.50:612,96,0	1/1:10,12:20:27.36:282,27,0	0/0:19,0:19:57.19:0,57,780	0/0:18,0:18:51.16:0,51,696	1/1:2,12:12:17.87:236,18,0	1/1:9,20:28:76.81:487,77,0	1/1:7,13:20:49.39:316,49,0	1/1:5,17:22:59.89:396,60,0	1/1:8,21:28:64.16:481,64,0	1/1:13,7:17:31.96:214,32,0	1/1:14,13:22:31.42:210,31,0	1/1:9,9:16:46.58:331,47,0	1/1:9,10:18:51.70:352,52,0	1/1:4,3:6:7.28:28,7,0	1/1:9,18:25:60.05:413,60,0	1/1:6,16:20:43.93:308,44,0	1/1:8,5:9:19.40:113,19,0	0/0:23,0:22:66.20:0,66,878	1/1:9,15:23:67.23:507,67,0	1/1:10,16:24:45.18:430,45,0	1/1:6,9:14:26.82:243,27,0
chr10	99568095	.	A	AG	7003.30	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=14.029;DP=625;FS=36.468;HRun=0;HaplotypeScore=179.7572;InbreedingCoeff=0.9664;MQ=49.21;MQ0=32;MQRankSum=-10.743;QD=14.81;ReadPosRankSum=3.403;VQSLOD=3.9097;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,13:20:44.01:256,44,0	1/1:2,6:7:17.15:115,17,0	0/0:28,0:12:18.59:0,19,270	0/0:39,0:13:14.25:0,14,214	0/0:22,0:22:63.20:0,63,864	1/1:11,8:21:34.90:277,35,0	1/1:8,9:15:31.78:235,32,0	1/1:30,15:41:97.39:647,97,0	1/1:8,10:18:43.19:300,43,0	0/0:22,0:22:66.19:0,66,861	0/0:17,0:17:51.16:0,51,697	1/1:3,11:13:35.69:277,36,0	1/1:9,18:28:75.11:487,75,0	1/1:7,13:20:57.39:365,57,0	1/1:6,17:23:65.90:446,66,0	1/1:9,19:28:67.80:513,68,0	1/1:12,7:16:8.21:126,8,0	1/1:15,12:23:34.78:241,35,0	1/1:9,9:16:31.46:266,31,0	1/1:9,10:18:14.19:254,14,0	1/1:5,3:7:11.06:75,11,0	1/1:10,18:26:70.46:445,70,0	1/1:6,16:20:43.94:308,44,0	1/1:8,5:9:20.24:141,20,0	0/0:23,0:22:66.20:0,66,877	1/1:9,15:23:51.03:461,51,0	1/1:10,16:24:63.34:472,63,0	1/1:6,9:14:38.29:295,38,0
chr10	99568838	.	T	TA	23860.51	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=2.306;DP=872;FS=1.484;HRun=1;HaplotypeScore=128.1120;InbreedingCoeff=1.0000;MQ=67.30;MQ0=1;MQRankSum=-0.844;QD=43.07;ReadPosRankSum=2.221;VQSLOD=4.4385;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:66.17:0,66,868	1/1:1,16:17:48.16:765,48,0	0/0:30,0:25:68.59:0,69,921	0/0:18,0:16:42.12:0,42,556	0/0:23,0:23:69.23:0,69,965	0/0:30,0:30:78.24:0,78,1072	1/1:1,31:32:87.30:1390,87,0	1/1:1,41:41:99:1866,120,0	1/1:0,38:38:99:1679,105,0	0/0:34,0:34:99:0,102,1424	0/0:20,0:20:60.20:0,60,839	1/1:0,36:36:95.93:1528,96,0	1/1:0,28:28:81.28:1295,81,0	1/1:3,47:50:99:2151,135,0	1/1:0,41:41:99:1823,114,0	1/1:1,33:34:87.30:1390,87,0	0/0:37,0:37:96.32:0,96,1342	0/0:20,0:20:54.18:0,54,755	1/1:2,26:28:78.27:1247,78,0	1/1:0,28:28:72.25:1151,72,0	1/1:1,33:34:81.28:1295,81,0	1/1:0,40:40:99:1775,111,0	1/1:0,25:25:63.21:1005,63,0	1/1:0,40:40:99:1822,114,0	0/0:31,0:31:87.29:0,87,1214	0/0:32,0:32:96.32:0,96,1339	1/1:3,38:41:99:1678,105,0	0/0:16,0:16:39.13:0,39,544
chr10	99569264	.	TC	T	483.36	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.922;DP=742;FS=1.962;HRun=5;HaplotypeScore=83.6910;InbreedingCoeff=0.9954;MQ=83.64;MQ0=0;MQRankSum=-0.090;QD=23.02;ReadPosRankSum=0.976;VQSLOD=2.6069;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,114,1524	0/0:12,0:12:30.10:0,30,410	0/0:34,0:34:84.27:0,84,1102	0/0:26,0:26:72.23:0,72,958	0/0:22,0:22:63.20:0,63,837	0/0:21,0:21:51.17:0,51,690	0/0:16,0:16:45.15:0,45,613	0/0:29,0:29:72.23:0,72,969	0/0:22,0:22:66.18:0,66,875	0/0:21,0:21:57.19:0,57,775	0/0:22,0:22:60.20:0,60,814	0/0:37,0:37:99:0,108,1475	0/0:28,0:28:81.25:0,81,1076	0/0:32,0:32:96.23:0,96,1268	0/0:33,0:33:96.22:0,96,1253	0/0:33,0:33:96.30:0,96,1272	1/1:2,19:21:51.15:578,51,0	0/0:17,0:17:45.15:0,45,615	0/0:25,0:25:63.21:0,63,858	0/0:38,0:38:99:0,108,1441	0/0:53,0:53:99:0,135,1828	0/0:19,0:19:51.16:0,51,681	0/0:26,0:26:75.21:0,75,995	0/0:18,0:18:42.13:0,42,557	0/0:20,0:20:51.17:0,51,694	0/0:29,0:29:78.26:0,78,1067	0/0:35,0:35:99:0,102,1393	0/0:7,0:7:21.07:0,21,287
chr10	99569392	.	G	GC	1230.08	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=9.260;DP=407;FS=145.704;HRun=1;HaplotypeScore=310.5811;InbreedingCoeff=0.5867;MQ=93.67;MQ0=0;MQRankSum=-12.701;QD=4.86;ReadPosRankSum=3.747;VQSLOD=0.3956;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:9.72:69,10,0	1/1:4,0:4:8.10:34,8,0	0/0:27,0:27:74.34:0,74,883	0/0:21,0:21:45.58:0,46,539	0/0:34,0:34:99:0,102,1324	1/1:11,0:11:4.19:30,4,0	1/1:9,0:9:6.18:49,6,0	1/1:10,0:10:18.64:114,19,0	1/1:17,0:17:11.33:86,11,0	0/0:25,0:25:72.22:0,72,912	0/0:17,0:17:48.14:0,48,606	1/1:15,0:15:22.58:140,23,0	1/1:9,0:9:4.83:64,5,0	1/1:12,4:16:22.36:94,22,0	1/1:17,0:17:10.82:95,11,0	1/1:14,0:14:5.72:52,6,0	1/1:5,0:5:7.37:38,7,0	0/1:5,0:5:10.04:30,0,10	0/0:5,0:5:6.03:0,6,21	1/1:17,0:17:24.96:96,25,0	1/1:15,0:15:19.55:114,20,0	1/1:15,0:15:19.75:95,20,0	0/1:12,0:12:7.60:26,0,8	1/1:5,0:5:2.84:14,3,0	0/0:25,0:25:75.17:0,75,908	0/1:16,0:16:66.60:67,0,121	1/1:16,0:16:5.02:66,5,0	1/1:9,0:9:8.39:50,8,0
chr10	99569476	.	CAG	C	12587.42	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=13.638;DP=552;FS=26.356;HRun=0;HaplotypeScore=124.3663;InbreedingCoeff=0.9912;MQ=74.58;MQ0=0;MQRankSum=-8.065;QD=34.11;ReadPosRankSum=5.742;VQSLOD=4.0309;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:31:66.22:945,66,0	1/1:1,7:8:12.04:172,12,0	0/0:28,0:28:75.20:0,75,1160	0/0:23,0:21:41.12:0,41,684	0/0:30,0:30:81.28:0,81,1475	1/1:1,21:22:54.18:772,54,0	1/1:0,18:18:45.15:644,45,0	1/1:4,22:26:66.22:944,66,0	1/1:0,19:19:51.14:701,51,0	0/0:41,0:41:99:0,117,2121	0/0:16,0:16:45.15:0,45,817	1/1:1,19:20:51.17:729,51,0	1/1:0,11:11:30.10:429,30,0	1/1:1,13:14:33.11:472,33,0	1/1:0,15:15:45.15:643,45,0	1/1:2,15:17:36.09:493,36,0	0/0:23,0:23:60.21:0,60,1095	1/1:0,11:11:33.11:473,33,0	1/1:5,17:22:54.17:755,54,0	1/1:1,18:19:42.14:601,42,0	1/1:0,22:22:38.81:558,39,0	1/1:1,15:16:36.12:515,36,0	1/1:3,14:17:36.12:515,36,0	1/1:0,22:22:54.18:772,54,0	0/0:22,0:22:63.22:0,63,1142	1/1:0,16:16:48.16:684,48,0	1/1:1,17:18:39.13:558,39,0	1/1:0,5:5:15.05:215,15,0
chr10	99569717	.	ATACACCAACAGCATTGTCCTCT	A	1039.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.211;DP=771;FS=15.138;HRun=0;HaplotypeScore=451.7251;InbreedingCoeff=0.9919;MQ=92.25;MQ0=0;MQRankSum=-3.975;QD=115.54;ReadPosRankSum=2.419;VQSLOD=2.9751;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.30:0,87,7995	0/0:16,0:16:48.16:0,48,4879	0/0:38,0:38:99:0,114,7913	0/0:29,0:29:81.27:0,81,6225	0/0:40,0:40:99:0,120,11022	0/0:23,0:23:69.22:0,69,6157	0/0:16,0:16:48.16:0,48,4117	0/0:32,0:32:90.28:0,90,7416	0/0:21,0:21:63.22:0,63,6674	0/0:35,0:35:99:0,105,9556	0/0:33,0:33:99:0,99,8647	0/0:19,0:19:57.17:0,57,4743	0/0:26,0:26:78.27:0,78,7334	0/0:28,0:28:84.29:0,84,8511	0/0:34,0:34:99:0,102,10263	0/0:34,0:34:99:0,102,10125	1/1:0,9:9:18.06:1130,18,0	0/0:21,0:21:63.22:0,63,5774	0/0:20,0:20:60.16:0,60,4651	0/0:34,0:34:99:0,99,8958	0/0:34,0:34:99:0,102,9738	0/0:31,0:31:93.32:0,93,8627	0/0:30,0:30:81.28:0,81,7752	0/0:30,0:30:90.30:0,90,8648	0/0:25,0:25:75.22:0,75,7387	0/0:34,0:34:99:0,99,9799	0/0:33,0:32:96.32:0,96,8827	0/0:17,0:17:51.18:0,51,5379
chr10	99569847	.	T	TTGTTTCTAATGTA	896.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.780;DP=651;FS=6.645;HRun=0;HaplotypeScore=266.5737;InbreedingCoeff=0.8891;MQ=97.95;MQ0=0;MQRankSum=-2.792;QD=112.11;ReadPosRankSum=0.636;VQSLOD=2.7893;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.26:0,75,2665	0/0:10,0:10:30.10:0,30,1198	0/0:33,0:33:87.76:0,88,2606	0/0:33,0:33:74.42:0,74,2260	0/0:31,0:31:87.26:0,87,3202	0/0:18,0:18:51.16:0,51,1923	0/0:25,0:25:72.21:0,72,2320	0/0:28,0:28:69.22:0,69,2303	0/0:22,0:22:66.21:0,66,2476	0/0:24,0:24:69.23:0,69,2437	0/0:20,0:20:60.19:0,60,2301	0/0:31,0:31:84.28:0,84,3191	0/0:25,0:25:69.18:0,69,2203	0/0:25,0:25:72.25:0,72,2790	0/0:34,0:34:99:0,102,3992	0/0:35,0:35:99:0,102,3919	1/1:1,4:8:15.05:985,15,0	0/0:20,0:20:57.12:0,57,2072	0/0:22,0:22:57.20:0,57,2245	0/0:23,0:23:66.18:0,66,2404	0/0:17,0:17:48.16:0,48,1709	0/0:19,0:19:54.19:0,54,2063	0/0:27,0:27:72.23:0,72,2651	0/0:23,0:23:63.22:0,63,2351	0/0:18,0:18:54.18:0,54,1901	0/0:21,0:21:60.21:0,60,2376	0/0:30,0:30:87.26:0,87,3036	0/0:3,0:3:6.02:0,6,240
chr10	99570234	.	T	TTAAG	18717.94	PASS	AB=0.567;AC=42;AF=0.750;AN=56;BaseQRankSum=8.526;DP=488;FS=12.672;HRun=0;HaplotypeScore=124.4492;InbreedingCoeff=0.7742;MQ=70.10;MQ0=4;MQRankSum=-12.528;QD=56.72;ReadPosRankSum=1.740;VQSLOD=6.0988;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,18:24:60.04:1270,60,0	1/1:0,9:9:27.09:672,27,0	0/0:32,0:20:48.14:0,48,860	0/0:29,0:22:63.18:0,63,1093	0/0:26,0:26:75.23:0,75,1356	1/1:0,15:15:39.13:1024,39,0	1/1:0,15:15:36.12:909,36,0	1/1:2,30:33:93.31:2216,93,0	1/1:0,18:18:39.13:1000,39,0	0/0:22,0:22:66.23:0,66,1279	0/0:16,0:16:48.15:0,48,895	1/1:0,14:14:42.14:1073,42,0	1/1:0,12:13:30.10:750,30,0	1/1:1,5:6:12.04:300,12,0	1/1:0,16:16:42.14:1105,42,0	1/1:2,21:23:42.14:1087,42,0	1/1:7,13:20:45.11:1082,45,0	1/1:1,11:12:23.38:655,23,0	1/1:2,12:14:36.10:819,36,0	1/1:6,16:22:60.17:1473,60,0	0/1:2,7:10:14.80:154,0,15	1/1:0,14:14:36.12:914,36,0	1/1:0,10:10:17.91:407,18,0	1/1:1,12:13:14.84:345,15,0	0/0:33,0:33:96.33:0,96,1855	0/1:3,8:11:86.23:540,0,86	1/1:1,16:17:33.11:844,33,0	1/1:0,1:1:3.01:77,3,0
chr10	99570244	.	ATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTTTG	A	3885.24	PASS	AB=1.000;AC=26;AF=0.542;AN=48;BaseQRankSum=5.258;DP=414;FS=1.643;HRun=0;HaplotypeScore=423.1644;InbreedingCoeff=0.4883;MQ=60.34;MQ0=7;MQRankSum=-6.789;QD=23.41;ReadPosRankSum=4.253;VQSLOD=0.4969;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:3.53:0,4,152	1/1:7,2:9:7.91:682,8,0	0/0:25,0:13:24.08:0,24,900	0/0:30,0:20:30.10:0,30,1165	0/0:22,0:24:45.15:0,45,4677	0/1:13,0:13:38.28:38,0,65	1/1:11,0:11:3.01:89,3,0	0/0:19,0:19:0:0,0,0	1/1:12,1:13:9.03:453,9,0	0/0:26,0:29:75.26:0,75,8062	0/0:14,0:16:38.72:0,39,3990	1/1:12,1:13:9.03:463,9,0	./.	./.	1/1:15,0:15:9.50:285,10,0	1/1:13,0:13:2.60:91,3,0	0/0:21,0:21:32.02:0,32,2228	0/1:7,0:7:32.33:32,0,329	1/1:8,0:7:6.02:242,6,0	1/1:16,4:20:15.05:530,15,0	1/1:9,0:8:3.48:89,3,0	./.	1/1:7,0:7:3.01:79,3,0	0/1:9,0:9:0:0,0,0	0/0:36,0:36:84.29:0,84,9217	0/1:8,0:8:99:472,0,875	1/1:11,0:11:8.98:341,9,0	./.
chr10	99570261	.	T	TCATG	1326.62	PASS	AB=0.846;AC=24;AF=0.545;AN=44;BaseQRankSum=6.868;DP=295;FS=0.757;HRun=0;HaplotypeScore=121.0306;InbreedingCoeff=0.1897;MQ=49.67;MQ0=18;MQRankSum=-6.955;QD=9.97;ReadPosRankSum=0.614;VQSLOD=2.4733;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:14:11.14:11,0,42	0/1:2,3:5:20.69:66,0,21	0/1:23,0:10:0.72:1,0,471	0/0:27,0:11:29.26:0,29,545	0/0:23,0:22:60.20:0,60,1168	0/1:9,0:9:12.04:12,0,22	1/1:1,3:4:2.52:70,3,0	./.	0/1:1,5:6:4.49:122,0,4	0/0:34,0:34:99:0,102,2027	0/0:15,0:15:38.79:0,39,799	1/1:1,6:7:9.03:186,9,0	./.	./.	1/1:0,8:8:9.50:210,10,0	1/1:0,4:4:3.01:74,3,0	0/0:16,0:16:38.99:0,39,674	0/1:7,0:7:16.43:16,0,190	1/1:4,2:2:6.02:160,6,0	0/1:4,8:12:11.97:125,0,12	1/1:1,4:4:3.48:71,3,0	./.	1/1:0,4:4:3.01:61,3,0	./.	0/0:31,0:30:84.13:0,84,1659	0/1:10,0:9:68.60:69,0,163	1/1:1,7:7:9.03:225,9,0	./.
chr10	99570265	.	T	TCATG	1419.29	PASS	AB=0.898;AC=24;AF=0.545;AN=44;BaseQRankSum=7.225;DP=273;FS=0.000;HRun=0;HaplotypeScore=103.1915;InbreedingCoeff=0.2619;MQ=50.69;MQ0=18;MQRankSum=-6.594;QD=14.78;ReadPosRankSum=-1.655;VQSLOD=2.6814;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,3:10:14.07:149,0,14	0/1:5,0:5:37.61:38,0,45	0/0:21,0:11:18:0,18,455	0/0:25,0:10:24.48:0,24,411	0/0:21,0:20:54.16:0,54,1022	1/1:0,3:3:3.01:85,3,0	1/1:4,0:4:3.01:59,3,0	./.	0/1:6,0:6:18.11:109,0,18	0/0:33,0:33:99:0,99,1913	0/0:15,0:15:38.78:0,39,761	1/1:7,0:7:9.01:141,9,0	./.	./.	1/1:8,0:8:9.50:190,10,0	1/1:4,0:4:3.01:61,3,0	0/0:13,0:13:28.40:0,28,531	0/1:3,1:5:26.62:161,0,27	1/1:6,0:2:6.02:93,6,0	0/1:12,0:12:18.80:104,0,19	1/1:5,0:4:3.48:59,3,0	./.	1/1:4,0:4:3.01:51,3,0	./.	0/0:32,0:31:84.12:0,84,1570	0/1:7,1:7:99:118,0,164	1/1:8,0:7:9.03:161,9,0	./.
chr10	99570284	.	G	GAA	8766.68	PASS	AB=0.923;AC=30;AF=0.536;AN=56;BaseQRankSum=10.444;DP=451;FS=1.795;HRun=0;HaplotypeScore=229.6650;InbreedingCoeff=0.7955;MQ=49.91;MQ0=12;MQRankSum=-11.039;QD=43.19;ReadPosRankSum=0.711;VQSLOD=4.3998;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:18.72:0,19,203	1/1:6,0:6:17.87:274,18,0	0/0:28,0:11:11.39:0,11,282	0/0:27,0:15:31.49:0,31,406	0/0:29,0:29:81.26:0,81,1277	0/0:23,0:23:19.80:0,20,152	1/1:8,0:8:4.06:336,4,0	1/1:13,0:12:33.11:632,33,0	1/1:11,0:11:32.90:472,33,0	0/0:31,0:31:92.80:0,93,1439	0/0:11,0:11:27.98:0,28,433	1/1:12,2:14:38.94:656,39,0	1/1:14,0:14:42.11:733,42,0	1/1:9,3:13:30.06:533,30,0	1/1:11,0:11:33.03:556,33,0	1/1:16,2:20:54.19:1056,54,0	0/0:12,0:12:30.02:0,30,350	0/0:7,0:7:9.74:0,10,124	0/1:9,2:9:27.81:327,0,28	1/1:20,0:20:45:774,45,0	1/1:12,0:11:21.07:386,21,0	1/1:16,0:16:43.87:732,44,0	1/1:12,0:12:28.59:468,29,0	0/1:7,0:7:47.41:51,0,47	0/0:34,0:33:90.30:0,90,1430	0/0:22,0:21:24.18:0,24,298	1/1:15,0:14:42.08:779,42,0	0/0:3,0:3:2.79:0,3,18
chr10	99570395	.	TC	T	19185.77	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=18.043;DP=662;FS=3.873;HRun=1;HaplotypeScore=170.4934;InbreedingCoeff=0.9996;MQ=73.24;MQ0=0;MQRankSum=-8.231;QD=38.29;ReadPosRankSum=3.889;VQSLOD=4.3508;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:39.13:544,39,0	1/1:0,11:11:33.11:461,33,0	0/0:23,0:23:66.13:0,66,940	0/0:14,0:14:39.07:0,39,554	0/0:43,0:43:99:0,129,1996	1/1:0,29:29:84.28:1171,84,0	1/1:0,13:13:30.10:417,30,0	1/1:0,22:22:66.20:886,66,0	1/1:0,23:23:60.20:837,60,0	0/0:36,0:36:99:0,105,1602	0/0:24,0:24:72.23:0,72,1124	1/1:0,27:27:78.26:1088,78,0	1/1:0,19:19:57.19:794,57,0	1/1:0,23:23:66.22:920,66,0	1/1:0,34:34:87.29:1212,87,0	1/1:0,35:35:99:1380,99,0	1/1:0,24:24:66.22:919,66,0	1/1:0,23:23:60.16:813,60,0	1/1:0,11:11:33.08:440,33,0	1/1:0,32:32:93.24:1274,93,0	1/1:0,14:14:36.08:480,36,0	1/1:0,34:34:96.19:1284,96,0	1/1:0,29:29:84.23:1148,84,0	1/1:0,12:12:30.10:419,30,0	0/0:21,0:21:63.19:0,63,952	1/1:1,26:27:33.30:1023,33,0	1/1:0,32:32:84.28:1172,84,0	1/1:0,12:12:36.12:503,36,0
chr10	99570868	.	C	CAT	2974.89	PASS	AB=0.968;AC=33;AF=0.589;AN=56;BaseQRankSum=7.923;DP=605;FS=45.264;HRun=0;HaplotypeScore=218.4818;InbreedingCoeff=0.5017;MQ=36.64;MQ0=37;MQRankSum=-6.099;QD=6.90;ReadPosRankSum=1.758;VQSLOD=1.6542;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:23:14.55:0,15,111	1/1:6,0:6:2.96:19,3,0	0/0:17,0:7:8.11:0,8,100	0/0:10,0:1:2.96:0,3,19	0/0:23,0:21:35.85:0,36,297	0/0:24,0:24:41.54:0,42,297	0/1:33,0:32:9.63:125,0,10	1/1:52,0:49:1.22:312,1,0	1/1:19,3:21:15.06:243,15,0	0/0:24,0:21:62.79:0,63,577	0/0:15,0:15:42.02:0,42,435	1/1:26,3:28:19.81:214,20,0	1/1:21,5:26:8.02:323,8,0	1/1:15,1:16:3.59:112,4,0	0/1:17,4:21:20.66:190,0,21	1/1:16,4:21:16.61:345,17,0	0/1:16,0:13:1.29:1,0,62	0/0:15,0:12:11.86:0,12,81	1/1:21,1:22:47.03:310,47,0	1/1:18,2:19:6.41:171,6,0	1/1:16,0:12:2.67:11,3,0	1/1:20,1:20:11.10:112,11,0	1/1:25,1:25:12.71:81,13,0	1/1:19,2:22:14.74:123,15,0	0/0:18,0:17:38.98:0,39,363	0/1:24,0:22:94.75:95,0,173	1/1:24,1:25:31.02:369,31,0	0/1:10,0:8:10.57:11,0,35
chr10	99570886	.	CACAGAGAGAGAGAG	C	11762.69	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=6.528;DP=568;FS=9.200;HRun=0;HaplotypeScore=272.0217;InbreedingCoeff=0.0444;MQ=39.78;MQ0=29;MQRankSum=-8.575;QD=26.73;ReadPosRankSum=-0.128;VQSLOD=2.1128;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:17:9.03:247,9,0	1/1:7,0:7:15.05:350,15,0	0/0:28,0:9:27.09:0,27,1484	0/0:19,0:11:15.73:0,16,1305	0/0:19,0:18:27.09:0,27,1266	1/1:19,0:19:18.06:614,18,0	1/1:32,0:31:42.52:1016,43,0	1/1:50,0:48:83.70:1619,84,0	0/1:18,0:17:99:473,0,128	0/0:24,0:21:57.12:0,57,2494	0/0:18,0:18:28.62:0,29,2176	0/1:28,0:27:99:881,0,143	0/1:21,0:21:99:270,0,418	0/1:15,0:15:77.78:446,0,78	0/1:23,0:23:99:658,0,192	0/1:17,0:17:99:455,0,503	1/1:15,0:12:11.17:284,11,0	1/1:3,8:9:2.84:108,3,0	0/1:20,0:20:52.80:807,0,53	0/1:20,0:19:99:420,0,132	1/1:12,0:9:3.48:75,3,0	0/1:15,0:14:23.20:582,0,23	1/1:26,0:25:24.30:542,24,0	0/1:22,0:21:70.05:246,0,70	0/0:20,0:19:36.02:0,36,1823	0/1:20,0:18:99:821,0,280	0/1:22,0:22:99:760,0,226	1/1:8,0:6:3.01:89,3,0
chr10	99570888	.	CAGAGAG	C	8782.10	PASS	AB=0.697;AC=41;AF=0.732;AN=56;BaseQRankSum=6.862;DP=562;FS=2.865;HRun=0;HaplotypeScore=221.6344;InbreedingCoeff=0.5785;MQ=40.01;MQ0=29;MQRankSum=-8.896;QD=20.33;ReadPosRankSum=0.572;VQSLOD=4.1042;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:17:6.02:86,6,0	1/1:2,5:7:15.05:265,15,0	0/0:31,0:12:36.12:0,36,942	0/0:20,0:12:24.69:0,25,763	0/0:20,0:19:36.09:0,36,776	1/1:3,0:20:18.06:301,18,0	1/1:23,9:31:42.93:778,43,0	1/1:16,0:43:57.19:1089,57,0	1/1:13,5:17:8.60:401,9,0	0/0:23,0:20:45.05:0,45,1156	0/0:19,0:19:42.60:0,43,983	1/1:9,19:27:24.91:662,25,0	0/1:14,7:21:27.17:266,0,27	1/1:9,6:15:21.06:363,21,0	1/1:12,10:22:6.79:487,7,0	0/1:10,6:16:46.21:331,0,46	1/1:12,3:12:11.97:214,12,0	1/1:11,0:9:3.01:49,3,0	1/1:9,11:20:34.67:673,35,0	1/1:12,8:19:6.17:322,6,0	1/1:6,6:9:2.75:55,3,0	1/1:8,5:14:29.63:476,30,0	1/1:12,14:25:24.63:408,25,0	1/1:19,3:21:7.26:177,7,0	0/0:17,0:16:33.11:0,33,884	0/1:7,12:17:50.66:640,0,51	1/1:8,13:21:27.45:688,27,0	1/1:2,0:6:3.01:51,3,0
chr10	99571082	.	T	TTGTG	17637.05	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=10.733;DP=611;FS=15.016;HRun=0;HaplotypeScore=156.6681;InbreedingCoeff=0.9964;MQ=84.60;MQ0=2;MQRankSum=-15.933;QD=54.77;ReadPosRankSum=-1.752;VQSLOD=4.9604;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,2095	1/1:1,12:12:33.11:865,33,0	0/0:24,0:24:63.18:0,63,1063	0/0:29,0:29:56.49:0,56,883	0/0:25,0:25:69.24:0,69,1254	0/0:30,0:30:66.23:0,66,1191	1/1:10,9:18:30.10:772,30,0	1/1:20,15:35:45.12:1027,45,0	1/1:5,18:23:60.21:1513,60,0	0/0:28,0:28:75.22:0,75,1257	0/0:20,0:20:54.18:0,54,956	1/1:9,8:17:27.09:666,27,0	1/1:5,13:18:45.15:1130,45,0	1/1:3,15:18:45.15:1179,45,0	1/1:5,18:24:63.22:1547,63,0	1/1:3,13:15:42.14:1088,42,0	0/0:22,0:22:20.29:0,20,835	0/0:17,0:17:45.15:0,45,825	1/1:7,10:17:39.13:958,39,0	1/1:10,17:27:57.20:1458,57,0	1/1:3,8:11:15.05:370,15,0	1/1:4,19:23:57.20:1468,57,0	1/1:4,18:22:54.17:1318,54,0	1/1:1,11:12:24.08:596,24,0	0/0:22,0:22:57.20:0,57,1040	0/0:22,0:22:60.21:0,60,1103	1/1:5,20:26:66.23:1683,66,0	0/0:10,0:10:27.09:0,27,493
chr10	99571149	.	T	TTC	20153.20	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=17.697;DP=611;FS=15.975;HRun=0;HaplotypeScore=175.4186;InbreedingCoeff=0.9426;MQ=72.39;MQ0=0;MQRankSum=-17.101;QD=50.76;ReadPosRankSum=-0.871;VQSLOD=3.0507;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,1769	1/1:1,7:8:24.08:452,24,0	0/0:21,0:21:62.80:0,63,915	0/0:24,0:24:64.09:0,64,903	0/0:22,0:22:66.22:0,66,1010	0/0:20,0:20:54.17:0,54,805	1/1:3,17:21:48.16:914,48,0	1/1:7,17:23:66.23:1243,66,0	1/1:6,25:32:87.30:1616,87,0	0/0:32,0:32:87.30:0,87,1329	0/0:20,0:20:60.17:0,60,859	1/1:5,19:24:60.20:1135,60,0	1/1:5,27:32:87.30:1666,87,0	1/1:2,23:25:75.25:1408,75,0	1/1:6,24:31:81.28:1531,81,0	1/1:2,18:20:60.21:1150,60,0	1/1:0,25:26:72.25:1372,72,0	0/0:14,0:14:42.10:0,42,617	1/1:11,13:24:69.17:1237,69,0	1/1:3,16:19:48.16:921,48,0	1/1:2,17:20:54.19:1037,54,0	1/1:1,9:10:30.10:574,30,0	1/1:3,12:16:48.16:893,48,0	1/1:0,14:14:30.10:567,30,0	0/0:20,0:20:60.20:0,60,919	1/1:3,15:18:2.21:802,2,0	1/1:4,25:29:84.29:1578,84,0	1/1:3,0:3:3.01:58,3,0
chr10	99571841	.	T	TC	12333.44	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=5.850;DP=659;FS=17.374;HRun=5;HaplotypeScore=83.5237;InbreedingCoeff=0.9914;MQ=85.83;MQ0=0;MQRankSum=-4.323;QD=29.30;ReadPosRankSum=4.286;VQSLOD=3.3957;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,40:42:99:1370,105,0	1/1:2,10:12:27.09:355,27,0	0/0:19,0:19:46.55:0,47,445	0/0:25,0:25:44.17:0,44,464	0/0:24,0:24:62.98:0,63,645	1/1:3,13:16:33.04:412,33,0	1/1:5,32:37:72.23:947,72,0	0/0:31,0:31:78.14:0,78,819	1/1:7,23:30:60.19:786,60,0	0/0:18,0:18:51.09:0,51,530	0/0:14,0:14:30.07:0,30,321	1/1:3,31:34:89.50:1145,90,0	1/1:4,20:24:42.14:552,42,0	1/1:3,21:24:60.19:785,60,0	1/1:4,28:32:63.20:829,63,0	1/1:0,20:20:51.17:671,51,0	1/1:0,29:29:75.24:986,75,0	1/1:0,12:12:30.10:395,30,0	0/0:19,0:19:50.97:0,51,493	0/0:16,0:16:30.04:0,30,322	1/1:5,51:56:99:1580,123,0	1/1:1,16:17:36.12:474,36,0	1/1:3,12:15:33.09:414,33,0	1/1:0,21:21:48.16:631,48,0	0/0:18,0:18:45.10:0,45,477	0/0:22,0:22:57.13:0,57,602	0/0:29,0:29:84.04:0,84,850	0/0:3,0:3:9.02:0,9,96
chr10	99572024	.	AAC	A	1624.81	PASS	AB=0.869;AC=18;AF=0.321;AN=56;BaseQRankSum=0.255;DP=718;FS=1.561;HRun=0;HaplotypeScore=149.5685;InbreedingCoeff=0.3000;MQ=64.44;MQ0=5;MQRankSum=2.894;QD=5.58;ReadPosRankSum=-0.275;VQSLOD=3.4011;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:46:2.86:0,3,25	0/0:15,0:15:39.13:0,39,594	0/0:25,0:16:3.01:0,3,43	0/0:34,0:21:11.52:0,12,142	0/1:25,3:27:25.97:26,0,499	0/0:20,0:23:9.01:0,9,88	0/1:34,3:38:41.99:42,0,697	1/1:21,9:29:6.38:241,6,0	0/0:16,2:17:2.03:0,2,427	0/0:22,0:22:36.12:0,36,552	0/1:19,3:24:53.13:53,0,658	0/0:30,0:30:45.15:0,45,669	0/1:18,1:19:3.97:4,0,361	0/1:16,1:17:0.99:1,0,382	0/0:19,0:19:36.12:0,36,550	0/0:13,0:13:27.09:0,27,398	0/0:42,0:40:68.21:0,68,1213	0/0:16,0:21:20.99:0,21,224	1/1:11,6:18:23.71:222,24,0	1/1:10,14:27:44.79:470,45,0	0/0:45,2:49:25.14:0,25,1237	0/1:23,2:24:19.94:20,0,591	0/0:18,0:18:33.07:0,33,477	0/0:47,2:51:25.42:0,25,1179	0/1:17,2:19:32.01:32,0,404	1/1:10,9:20:26.44:280,26,0	0/1:5,14:22:4.52:340,0,5	1/1:1,2:3:6.02:68,6,0
chr10	99572522	.	C	CTGTG	329.22	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.007;DP=597;FS=0.932;HRun=0;HaplotypeScore=156.5593;InbreedingCoeff=0.8627;MQ=61.13;MQ0=13;MQRankSum=0.248;QD=4.99;ReadPosRankSum=-1.578;VQSLOD=2.6209;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:11.89:116,12,0	0/0:14,0:14:24.06:0,24,356	0/0:45,0:21:1:0,1,173	0/0:48,0:29:43.34:0,43,584	0/0:13,0:14:36.07:0,36,484	1/1:24,0:24:12:177,12,0	0/0:20,0:20:48.18:0,48,677	0/0:25,0:24:48.14:0,48,711	0/0:22,0:22:53.90:0,54,811	0/0:15,0:15:30.09:0,30,458	0/0:15,0:15:33.11:0,33,541	0/0:24,0:24:60.18:0,60,909	0/0:17,0:17:36.11:0,36,548	0/0:14,0:14:22.31:0,22,361	0/0:16,0:16:30.10:0,30,481	0/0:12,0:12:33.08:0,33,489	0/0:24,0:24:47.08:0,47,856	1/1:12,9:23:8.53:164,9,0	0/0:17,0:17:14.79:0,15,256	0/0:11,0:11:15.05:0,15,231	0/0:42,0:42:81.27:0,81,1291	0/0:17,0:17:42.14:0,42,676	0/0:18,0:18:45.15:0,45,713	0/0:21,0:21:42.14:0,42,667	0/0:19,0:19:38.96:0,39,587	0/0:26,0:26:59.44:0,59,864	0/0:23,0:23:57.19:0,57,918	0/0:11,0:11:24.06:0,24,347
chr10	99572540	.	ATG	A	4030.96	PASS	AB=0.847;AC=26;AF=0.464;AN=56;BaseQRankSum=9.730;DP=673;FS=3.838;HRun=0;HaplotypeScore=118.1004;InbreedingCoeff=0.5322;MQ=57.25;MQ0=18;MQRankSum=1.247;QD=11.52;ReadPosRankSum=7.946;VQSLOD=3.0513;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:8.74:0,9,77	1/1:3,7:10:15.05:178,15,0	0/1:50,1:15:11.57:12,0,181	0/0:53,0:34:34.19:0,34,337	0/1:18,2:20:65.23:65,0,325	0/0:28,0:28:11.87:0,12,113	1/1:13,13:26:17.64:188,18,0	0/0:32,1:32:5.76:0,6,684	1/1:13,10:24:41.77:442,42,0	0/0:17,0:16:2.31:0,2,458	0/0:14,2:16:0.58:0,1,472	1/1:7,18:26:41.63:452,42,0	1/1:6,14:21:14.17:250,14,0	0/1:5,10:16:26.86:155,0,27	1/1:4,11:15:18.06:213,18,0	1/1:3,9:12:24.07:284,24,0	0/0:29,0:29:21.44:0,21,715	0/0:18,0:18:14.82:0,15,152	0/0:23,0:23:0.46:0,0,377	0/0:12,0:12:30.09:0,30,426	1/1:9,35:44:62.93:723,63,0	1/1:5,15:20:27.06:320,27,0	1/1:3,18:22:41.79:476,42,0	1/1:8,16:24:21.06:249,21,0	0/1:17,2:19:25.93:26,0,559	0/0:22,1:23:3.17:0,3,488	0/0:27,3:30:1.13:0,1,901	0/0:13,0:13:24.08:0,24,370
chr10	99573786	.	CT	C	6746.82	PASS	AB=0.893;AC=32;AF=0.571;AN=56;BaseQRankSum=11.834;DP=662;FS=12.731;HRun=10;HaplotypeScore=70.9477;InbreedingCoeff=0.8372;MQ=73.54;MQ0=0;MQRankSum=-0.085;QD=17.99;ReadPosRankSum=4.197;VQSLOD=4.5645;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:29:68.96:598,69,0	1/1:1,9:10:23.99:208,24,0	0/1:19,1:20:2.95:3,0,221	0/0:13,0:11:0.08:0,0,107	0/0:26,1:27:33.47:0,33,576	1/1:5,27:32:41.79:592,42,0	1/1:4,15:19:11.81:331,12,0	0/0:29,0:29:66.16:0,66,716	1/1:0,19:19:53.99:469,54,0	0/0:24,1:25:31.08:0,31,558	0/0:27,0:27:62.98:0,63,660	1/1:2,22:24:59.98:521,60,0	1/1:1,22:24:65.02:553,65,0	1/1:7,21:28:41.74:522,42,0	1/1:3,24:27:68.98:599,69,0	1/1:3,15:19:22.79:346,23,0	0/1:16,4:20:27.02:27,0,412	1/1:5,19:24:48.45:418,48,0	0/0:27,0:27:63.15:0,63,682	0/0:33,1:34:60.35:0,60,851	1/1:4,13:17:35.99:313,36,0	1/1:5,18:23:50.10:439,50,0	1/1:6,16:22:50.97:442,51,0	1/1:4,14:18:41.98:365,42,0	0/0:34,0:34:78.19:0,78,847	0/0:27,0:27:60.15:0,60,649	0/0:33,1:34:67.21:0,67,969	0/0:10,0:10:30.08:0,30,332
chr10	99574811	.	GATAGATAC	G	2871.50	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-2.500;DP=671;FS=0.835;HRun=0;HaplotypeScore=214.9070;InbreedingCoeff=0.1302;MQ=63.78;MQ0=7;MQRankSum=1.355;QD=8.52;ReadPosRankSum=4.453;VQSLOD=2.5504;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,28:32:9.03:235,9,0	0/1:10,0:10:7.01:107,0,7	0/0:31,0:22:50.04:0,50,483	0/0:21,0:16:20.84:0,21,215	0/0:30,0:30:66.06:0,66,1300	1/1:19,1:20:51.04:738,51,0	0/1:19,0:18:12.27:145,0,12	0/0:36,0:30:74.98:0,75,655	0/1:25,0:24:48.84:148,0,49	0/0:30,0:30:87.20:0,87,2059	0/0:25,0:25:54.03:0,54,1001	0/1:22,0:22:34.57:77,0,35	0/1:25,0:25:99:140,0,143	0/1:23,0:23:97.16:167,0,97	1/1:30,0:30:16.58:212,17,0	0/1:27,0:27:62.17:129,0,62	0/0:17,0:17:14.19:0,14,582	1/1:15,0:15:41.79:437,42,0	0/0:13,0:13:29.99:0,30,448	0/0:29,0:29:56.05:0,56,946	0/1:28,0:28:99:143,0,145	0/1:20,0:20:99:105,0,115	0/1:23,0:21:83.76:145,0,84	0/1:18,0:18:59.24:128,0,59	0/0:26,0:26:53.96:0,54,815	0/0:43,0:42:99:0,120,2488	0/0:21,0:21:54:0,54,780	0/0:12,0:11:29.94:0,30,557
chr10	99574819	.	C	CATAG	4877.89	PASS	AB=0.981;AC=48;AF=0.923;AN=52;BaseQRankSum=-4.132;DP=670;FS=2.793;HRun=0;HaplotypeScore=182.6913;InbreedingCoeff=0.0530;MQ=61.19;MQ0=11;MQRankSum=3.112;QD=7.83;ReadPosRankSum=-1.607;VQSLOD=4.0109;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:3.98:4,0,14	1/1:12,0:12:4.23:25,4,0	./.	./.	1/1:14,15:29:24.08:547,24,0	0/1:20,0:20:2.12:2,0,77	1/1:16,0:15:6.38:40,6,0	1/1:40,0:28:4.90:21,5,0	1/1:22,0:21:2.48:24,2,0	1/1:14,19:33:54.12:988,54,0	1/1:14,13:28:21.07:477,21,0	1/1:17,0:17:3.01:48,3,0	1/1:25,0:25:10.50:72,10,0	1/1:24,0:24:9.34:72,9,0	1/1:31,0:31:4.21:26,4,0	1/1:25,0:25:3.01:50,3,0	1/1:16,3:19:22.65:344,23,0	0/1:17,0:17:10.35:10,0,60	0/1:11,1:10:10.73:131,0,11	1/1:16,16:33:15.05:350,15,0	1/1:23,0:23:9.43:70,9,0	1/1:18,0:18:5.91:94,6,0	1/1:24,0:22:8.95:66,9,0	1/1:18,0:18:3.01:50,3,0	1/1:15,11:27:12.04:280,12,0	1/1:41,0:43:56.96:620,57,0	1/1:13,0:24:14.08:214,14,0	1/1:9,0:12:18.03:253,18,0
chr10	99574854	.	A	AGATAGATAGAT	5142.22	PASS	AB=0.993;AC=25;AF=0.446;AN=56;BaseQRankSum=5.097;DP=718;FS=17.469;HRun=0;HaplotypeScore=275.1737;InbreedingCoeff=0.5901;MQ=52.71;MQ0=18;MQRankSum=1.552;QD=13.57;ReadPosRankSum=3.153;VQSLOD=2.2261;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:30.06:0,30,470	1/1:7,0:7:9.03:173,9,0	0/0:10,0:3:9.02:0,9,117	0/0:14,0:7:14.79:0,15,197	0/0:34,0:34:52.51:0,53,606	0/0:18,0:18:30.56:0,31,530	1/1:22,0:21:33.11:501,33,0	0/0:58,0:39:99:0,101,1436	1/1:21,0:20:13.59:195,14,0	0/0:34,0:34:81.18:0,81,847	0/0:27,0:27:40.77:0,41,486	1/1:12,15:27:15.05:332,15,0	0/1:25,0:26:19.70:422,0,20	1/1:30,0:30:39.08:668,39,0	1/1:29,0:29:23.43:336,23,0	1/1:11,20:31:14.84:312,15,0	0/0:19,0:19:41.29:0,41,435	0/0:19,0:19:11.43:0,11,693	0/0:14,0:10:24.71:0,25,367	0/0:35,0:35:47.98:0,48,597	0/1:23,0:23:46.62:304,0,47	1/1:7,22:29:14.96:453,15,0	1/1:23,0:21:26.68:443,27,0	1/1:10,9:19:5.92:208,6,0	0/0:28,0:28:40.38:0,40,524	0/1:43,0:42:99:329,0,724	0/1:25,0:25:99:251,0,261	0/1:24,0:24:99:216,0,710
chr10	99574930	.	T	TG	3676.04	PASS	AB=0.938;AC=23;AF=0.411;AN=56;BaseQRankSum=12.136;DP=630;FS=0.766;HRun=1;HaplotypeScore=167.1842;InbreedingCoeff=0.9236;MQ=49.20;MQ0=20;MQRankSum=-0.708;QD=17.02;ReadPosRankSum=1.196;VQSLOD=3.8569;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:32.18:0,32,381	1/1:8,0:8:23.71:218,24,0	0/0:36,0:11:33.06:0,33,396	0/0:37,0:15:44.25:0,44,475	0/0:31,0:31:81.26:0,81,1052	0/0:13,0:21:37.41:0,37,469	0/1:14,1:15:17.19:155,0,17	0/0:40,0:26:72.23:0,72,934	1/1:17,7:24:56.71:504,57,0	0/0:23,0:23:69.22:0,69,895	0/0:11,0:14:27.21:0,27,343	1/1:16,6:22:51.71:439,52,0	1/1:8,8:16:29.11:238,29,0	1/1:10,3:13:26.58:256,27,0	1/1:14,4:18:41.98:390,42,0	1/1:20,6:26:62.12:518,62,0	0/0:18,0:18:44.87:0,45,539	0/0:20,0:24:31.59:0,32,577	0/0:14,0:12:36.09:0,36,447	0/0:27,0:37:75.24:0,75,971	1/1:15,2:15:16.01:172,16,0	1/1:14,7:20:38.74:350,39,0	1/1:15,1:16:29.19:250,29,0	1/1:12,6:20:17.93:184,18,0	0/0:22,0:22:60.20:0,60,779	0/0:21,0:27:66.21:0,66,855	0/0:24,1:24:54.15:0,54,673	0/0:23,0:23:69.20:0,69,869
chr10	99574931	.	GATA	G	4752.60	PASS	AB=0.941;AC=23;AF=0.411;AN=56;BaseQRankSum=12.140;DP=623;FS=1.613;HRun=0;HaplotypeScore=166.0263;InbreedingCoeff=0.8766;MQ=48.99;MQ0=22;MQRankSum=-1.664;QD=22.52;ReadPosRankSum=1.165;VQSLOD=4.9394;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:24.83:0,25,362	1/1:4,4:8:23.86:293,24,0	0/0:36,0:11:33.06:0,33,389	0/0:37,0:15:45.03:0,45,495	0/0:31,0:31:81.27:0,81,1240	0/0:20,1:21:20.96:0,21,410	0/1:15,1:16:34.94:156,0,35	0/0:41,0:24:72.23:0,72,929	1/1:15,8:23:56.85:711,57,0	0/0:23,0:23:69.23:0,69,1025	0/0:14,0:14:0.09:0,0,260	1/1:17,5:22:50.55:549,51,0	1/1:12,4:16:29.08:266,29,0	1/1:9,3:12:26.66:285,27,0	1/1:11,7:18:42.11:575,42,0	1/1:14,11:25:62.38:781,62,0	0/0:18,0:18:44.64:0,45,515	0/0:24,0:24:7.60:0,8,408	0/0:13,0:12:34.66:0,35,427	0/0:37,0:36:74.49:0,74,890	1/1:15,2:15:21.87:201,22,0	1/1:13,7:19:38.77:426,39,0	1/1:7,7:14:29.40:311,29,0	1/1:19,1:20:17.93:199,18,0	0/0:21,0:21:59.93:0,60,1119	0/0:27,0:27:66.08:0,66,844	0/0:25,0:24:52.98:0,53,674	0/0:23,0:23:61.54:0,62,792
chr10	99574933	.	TA	T	2050.61	PASS	AB=0.961;AC=24;AF=0.429;AN=56;BaseQRankSum=11.485;DP=619;FS=0.385;HRun=1;HaplotypeScore=156.5391;InbreedingCoeff=0.7416;MQ=49.04;MQ0=23;MQRankSum=-0.016;QD=8.30;ReadPosRankSum=2.746;VQSLOD=1.0575;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:27.71:0,28,405	1/1:8,0:8:14.26:123,14,0	0/0:34,0:10:30.05:0,30,368	0/0:33,0:13:38.92:0,39,397	0/0:31,0:31:81.23:0,81,1180	0/0:21,0:21:33.84:0,34,493	0/1:15,0:15:46.72:66,0,47	0/0:44,0:23:69.22:0,69,1000	1/1:17,6:23:46.84:298,47,0	0/0:24,0:24:72.24:0,72,1080	0/1:15,0:15:37.75:38,0,284	1/1:16,6:22:30.79:293,31,0	1/1:9,7:16:14.86:180,15,0	1/1:7,3:10:19.07:147,19,0	1/1:14,4:18:33.65:205,34,0	1/1:18,6:24:48.06:276,48,0	0/0:18,0:18:44.92:0,45,546	0/1:24,1:25:3.30:3,0,471	0/0:11,0:11:26.99:0,27,332	0/0:37,0:36:75.17:0,75,1034	0/1:13,2:13:4.70:55,0,5	1/1:13,7:19:32.68:243,33,0	1/1:15,1:16:26.94:200,27,0	1/1:15,5:20:16.71:138,17,0	0/0:22,0:22:63.21:0,63,970	0/0:27,0:27:66.18:0,66,943	0/0:25,0:24:53.92:0,54,663	0/0:24,0:24:70.57:0,71,824
chr10	99574937	.	TAGATA	T	4393.30	PASS	AB=0.941;AC=23;AF=0.411;AN=56;BaseQRankSum=11.176;DP=607;FS=10.617;HRun=0;HaplotypeScore=184.1639;InbreedingCoeff=0.8868;MQ=49.16;MQ0=21;MQRankSum=-1.982;QD=20.63;ReadPosRankSum=2.012;VQSLOD=4.0271;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:21:2.36:0,2,382	1/1:6,3:9:26.69:323,27,0	0/0:28,0:10:27.09:0,27,390	0/0:28,0:9:24.07:0,24,310	0/0:26,0:26:69.24:0,69,1383	0/0:22,0:22:39.86:0,40,561	0/1:15,0:16:38.22:111,0,38	0/0:42,0:21:63.17:0,63,917	1/1:17,5:24:48.80:645,49,0	0/0:26,0:26:78.26:0,78,1445	0/0:19,0:19:46.38:0,46,562	1/1:17,4:22:41.18:450,41,0	1/1:13,2:17:25.08:277,25,0	1/1:7,1:9:13.37:155,13,0	1/1:12,6:18:41.62:613,42,0	1/1:15,9:26:48.44:792,48,0	0/0:17,0:17:36.07:0,36,485	0/0:25,0:25:45.54:0,46,663	0/0:7,0:7:14.48:0,14,227	0/0:36,0:35:54.48:0,54,884	1/1:12,1:12:11.76:100,12,0	1/1:14,6:20:34.97:382,35,0	1/1:12,6:18:38.30:426,38,0	1/1:19,0:19:17.38:121,17,0	0/0:22,0:22:63.21:0,63,1541	0/0:27,0:27:59.66:0,60,952	0/0:25,0:24:49.46:0,49,625	0/0:22,0:22:29.34:0,29,697
chr10	99575160	.	CTG	C	1949.30	PASS	AB=0.959;AC=36;AF=0.720;AN=50;BaseQRankSum=7.576;DP=517;FS=14.153;HRun=0;HaplotypeScore=117.8347;InbreedingCoeff=0.5039;MQ=45.22;MQ0=27;MQRankSum=0.642;QD=5.25;ReadPosRankSum=-2.510;VQSLOD=1.8592;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:28.90:0,29,235	1/1:1,0:8:2.92:17,3,0	./.	./.	0/0:26,0:26:32.82:0,33,270	0/1:24,0:23:2.26:2,0,278	1/1:17,1:17:0.71:43,1,0	./.	1/1:10,3:14:23.35:136,23,0	0/1:30,0:28:29.40:29,0,189	0/0:22,0:21:2.44:0,2,181	0/1:11,1:12:3.99:45,0,4	1/1:19,0:17:20.59:128,21,0	1/1:13,4:16:29.34:177,29,0	1/1:18,2:19:11.36:128,11,0	0/1:19,2:21:7.31:96,0,7	1/1:14,4:16:7.99:118,8,0	0/0:6,0:4:5.93:0,6,40	1/1:8,0:9:2.96:19,3,0	1/1:15,0:15:26.49:171,26,0	1/1:17,0:15:26.52:173,27,0	1/1:18,1:20:14.71:92,15,0	1/1:17,1:15:23.53:146,24,0	1/1:24,0:21:19.49:133,19,0	0/0:27,0:25:32.59:0,33,247	1/1:13,0:15:23.24:132,23,0	1/1:19,0:21:17.58:111,18,0	1/1:21,0:21:34.92:216,35,0
chr10	99576554	.	CTT	C	6306.17	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=4.787;DP=691;FS=3.718;HRun=11;HaplotypeScore=97.3768;InbreedingCoeff=0.9983;MQ=79.08;MQ0=1;MQRankSum=1.023;QD=21.75;ReadPosRankSum=6.282;VQSLOD=4.3026;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,1:25:18.80:0,19,131	1/1:0,12:12:30.07:319,30,0	0/0:26,0:24:33.70:0,34,465	0/0:25,0:22:28.71:0,29,331	0/0:33,0:34:82.01:0,82,1300	0/0:2,0:28:54.90:0,55,188	1/1:6,21:27:48.10:511,48,0	0/0:31,0:37:95.10:0,95,1162	1/1:3,26:29:57.12:606,57,0	0/0:21,0:21:57.17:0,57,805	0/0:18,0:19:51.12:0,51,667	1/1:3,19:22:48.11:511,48,0	1/1:0,30:30:81:862,81,0	1/1:3,17:20:30.06:319,30,0	1/1:2,25:26:60.15:638,60,0	1/1:1,26:27:57.04:606,57,0	0/0:30,0:30:36.41:0,36,617	0/0:19,0:19:51.11:0,51,736	0/0:24,0:25:56.61:0,57,735	0/0:28,0:29:81.24:0,81,1161	1/1:4,10:14:24.05:255,24,0	1/1:10,19:29:51.06:540,51,0	1/1:2,24:26:44.30:477,44,0	1/1:1,25:27:57.08:662,57,0	0/0:19,0:19:57.17:0,57,820	0/0:23,0:23:57.15:0,57,830	0/0:29,0:29:81.22:0,81,1163	0/0:11,0:11:27.07:0,27,392
chr10	99578498	.	A	ATGGGTGAATACTA	2244.34	PASS	AB=0.667;AC=34;AF=0.944;AN=36;BaseQRankSum=-2.799;DP=54;FS=6.315;HRun=0;HaplotypeScore=24.0524;InbreedingCoeff=-0.1950;MQ=125.50;MQ0=0;MQRankSum=-2.269;QD=46.76;ReadPosRankSum=-0.088;VQSLOD=1.7393;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:6.02:92,6,0	1/1:1,0:1:3.01:109,3,0	0/1:2,0:4:5.60:408,0,6	0/1:4,1:8:31.45:406,0,31	./.	./.	./.	1/1:3,0:3:6.01:55,6,0	1/1:2,0:2:6.02:109,6,0	1/1:1,0:1:3.01:81,3,0	./.	./.	1/1:3,0:3:6.02:129,6,0	1/1:3,0:3:3.01:74,3,0	./.	1/1:3,0:3:9.02:176,9,0	./.	./.	1/1:1,0:1:3.01:50,3,0	1/1:3,0:3:6.02:87,6,0	./.	1/1:1,0:1:3.01:76,3,0	1/1:1,0:1:3.01:74,3,0	1/1:1,0:1:3.01:44,3,0	1/1:3,0:2:3.01:78,3,0	1/1:3,0:3:9.01:189,9,0	1/1:3,0:3:5.99:96,6,0	./.
chr10	99583927	.	TTCTC	T	556.78	PASS	AB=0.982;AC=12;AF=0.222;AN=54;BaseQRankSum=-1.071;DP=488;FS=1.809;HRun=0;HaplotypeScore=107.6676;InbreedingCoeff=0.5516;MQ=64.83;MQ0=12;MQRankSum=1.047;QD=3.79;ReadPosRankSum=-0.904;VQSLOD=1.9138;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:27:23.92:77,0,24	0/0:7,0:7:6.02:0,6,92	0/0:28,0:16:2.84:0,3,14	0/0:37,0:19:5.88:0,6,24	0/0:10,0:11:6.02:0,6,103	0/0:14,0:14:5.86:0,6,34	0/0:19,0:19:17.96:0,18,221	1/1:25,6:26:17.87:189,18,0	0/0:21,0:21:23.74:0,24,324	0/1:21,0:20:31.69:32,0,228	0/0:12,0:11:3.01:0,3,31	0/0:18,0:18:37.48:0,37,408	0/0:20,0:20:22.36:0,22,236	0/0:23,0:23:38.63:0,39,466	0/0:16,0:16:17.11:0,17,164	0/0:20,0:20:33.01:0,33,379	0/0:13,0:13:8.76:0,9,24	0/0:5,0:9:5.77:0,6,33	1/1:22,0:20:7.18:53,7,0	1/1:7,4:11:5.93:40,6,0	0/0:11,0:11:15.03:0,15,209	0/0:14,0:15:14.50:0,14,139	0/0:14,0:14:18.01:0,18,198	0/0:19,0:19:20.09:0,20,114	0/0:8,0:8:5.98:0,6,104	1/1:17,0:16:11.89:137,12,0	1/1:18,0:17:17.03:191,17,0	./.
chr10	99583961	.	C	CTG	790.42	PASS	AB=0.967;AC=17;AF=0.315;AN=54;BaseQRankSum=8.513;DP=503;FS=0.753;HRun=0;HaplotypeScore=198.7620;InbreedingCoeff=-0.3018;MQ=36.02;MQ0=26;MQRankSum=-5.990;QD=2.49;ReadPosRankSum=-0.612;VQSLOD=1.9509;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:10.72:0,11,66	0/0:9,0:9:13.95:0,14,93	./.	0/0:7,0:2:0.47:0,0,1	0/1:18,1:18:1.91:2,0,55	0/1:14,2:16:19.78:123,0,20	0/1:26,1:25:50.02:86,0,50	0/0:23,0:21:51.08:0,51,326	0/1:21,0:21:49.08:136,0,49	0/0:22,0:21:58.46:0,58,530	0/1:11,0:7:0.79:1,0,23	0/1:28,0:28:99:119,0,159	0/1:18,1:18:49.98:50,0,108	0/0:22,0:19:25.67:0,26,146	0/1:27,0:25:45.79:55,0,46	0/0:19,0:19:2.04:0,2,151	0/1:17,1:15:42.73:43,0,100	0/0:10,0:9:16.73:0,17,98	0/1:23,0:22:11.40:11,0,182	1/1:20,3:23:3.01:94,3,0	0/1:11,0:9:1.28:1,0,78	0/1:19,2:21:58.13:58,0,83	0/0:18,0:16:14.47:0,14,91	0/0:15,0:13:5.65:0,6,49	0/1:13,0:13:23.94:24,0,40	0/1:25,1:22:39.73:40,0,250	0/1:13,1:13:39.02:90,0,39	0/0:9,0:7:6.83:0,7,37
chr10	99583978	.	T	TGC	1739.15	PASS	AB=0.995;AC=29;AF=0.558;AN=52;BaseQRankSum=4.142;DP=486;FS=5.382;HRun=0;HaplotypeScore=210.8494;InbreedingCoeff=-0.3417;MQ=31.99;MQ0=31;MQRankSum=-2.100;QD=4.24;ReadPosRankSum=4.260;VQSLOD=2.1361;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,1:20:13.63:25,0,14	0/1:6,0:6:20.44:45,0,20	./.	./.	0/0:23,1:22:13.55:0,14,163	0/1:19,1:20:79.55:92,0,80	1/1:27,0:26:0.64:166,1,0	0/1:31,0:29:99:160,0,140	1/1:19,0:19:28.05:200,28,0	0/0:21,0:21:20.84:0,21,516	0/0:12,0:8:1.17:0,1,6	0/1:25,0:25:58.90:144,0,59	0/1:18,0:17:18.62:53,0,19	0/1:18,0:15:19.44:55,0,19	0/1:25,0:22:39.44:160,0,39	0/1:14,0:14:55.86:56,0,68	0/1:13,0:10:9.60:54,0,10	0/1:8,0:7:9.08:9,0,33	0/1:21,0:20:55.71:95,0,56	1/1:21,1:22:12.29:142,12,0	0/1:7,0:5:0.26:26,0,0	0/1:22,0:22:37.51:38,0,64	0/1:19,0:17:3.80:4,0,43	1/1:14,0:13:0.94:2,1,0	0/1:15,0:15:20.16:20,0,98	0/1:22,0:19:89.52:95,0,90	1/1:13,0:13:26.76:151,27,0	1/1:9,0:7:10.93:99,11,0
chr10	99583979	.	C	CCG	3233.06	PASS	AB=0.920;AC=28;AF=0.538;AN=52;BaseQRankSum=-2.178;DP=486;FS=20.094;HRun=0;HaplotypeScore=203.6667;InbreedingCoeff=-0.1106;MQ=31.64;MQ0=32;MQRankSum=-0.774;QD=8.79;ReadPosRankSum=-0.593;VQSLOD=1.6242;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,1:21:9.80:42,0,10	1/1:4,1:5:11.63:141,12,0	./.	./.	0/0:24,0:22:14.10:0,14,166	0/1:19,1:20:66.80:67,0,115	1/1:23,4:26:9.10:289,9,0	0/1:32,0:29:61.87:197,0,62	0/1:13,6:19:14.45:421,0,14	0/0:22,0:22:18.45:0,18,613	0/0:13,0:9:1.75:0,2,17	1/1:19,6:26:43.75:541,44,0	0/1:13,2:14:16.36:148,0,16	1/1:15,2:14:23.50:152,24,0	0/1:19,4:20:1.61:288,0,2	0/1:12,2:14:3.03:208,0,3	0/1:13,0:10:38.85:39,0,51	0/1:7,1:7:33.32:33,0,53	0/1:21,0:20:70.44:176,0,70	0/1:21,1:22:3.95:4,0,48	1/1:6,1:5:6.90:89,7,0	0/0:20,1:21:17.38:0,17,115	0/0:19,0:17:4.68:0,5,47	1/1:13,1:13:0.94:2,1,0	0/1:17,0:17:14.89:15,0,148	0/1:22,1:20:99:161,0,136	0/1:9,3:12:35.53:275,0,36	1/1:9,0:7:6.88:104,7,0
chr10	99584004	.	TCTCC	T	174.25	PASS	AB=0.934;AC=11;AF=0.212;AN=52;BaseQRankSum=4.040;DP=400;FS=2.206;HRun=0;HaplotypeScore=170.3575;InbreedingCoeff=-0.0533;MQ=31.79;MQ0=14;MQRankSum=-3.104;QD=1.04;ReadPosRankSum=-0.652;VQSLOD=2.8856;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:17:16.49:0,16,203	0/0:4,0:4:9.03:0,9,197	./.	./.	0/0:20,1:20:7.54:0,8,130	0/1:17,1:18:3.92:4,0,431	0/1:21,1:21:15.96:16,0,526	0/0:29,0:25:46.27:0,46,1569	0/1:15,2:17:66.61:67,0,571	0/0:18,0:18:44.98:0,45,856	0/0:8,0:7:1.36:0,1,3	0/1:20,2:22:71.60:72,0,635	0/0:15,0:14:27.68:0,28,227	0/1:15,0:14:10.65:11,0,148	0/0:17,0:17:28.79:0,29,350	0/0:14,1:14:24.71:0,25,363	0/0:6,1:7:12.34:0,12,173	0/0:3,0:2:6.02:0,6,113	0/0:22,0:19:31.31:0,31,990	0/1:12,2:14:61.29:61,0,79	0/0:5,0:4:11.89:0,12,168	0/1:14,2:16:5.85:6,0,106	1/1:12,0:12:7.31:33,7,0	0/0:12,0:12:8.49:0,8,34	0/0:10,1:11:10.13:0,10,355	0/1:19,0:17:1.29:1,0,761	0/1:11,1:12:37.10:37,0,463	0/0:5,0:5:6.02:0,6,142
chr10	99586307	.	TAC	T	648.97	PASS	AB=0.909;AC=18;AF=0.346;AN=52;BaseQRankSum=4.370;DP=547;FS=0.575;HRun=0;HaplotypeScore=81.1396;InbreedingCoeff=-0.2516;MQ=65.62;MQ0=6;MQRankSum=0.208;QD=2.06;ReadPosRankSum=1.912;VQSLOD=1.6227;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:23:3.64:4,0,329	0/1:7,2:9:9.44:9,0,272	./.	./.	0/0:24,5:29:7.82:0,8,484	0/0:20,0:21:41.70:0,42,562	0/0:21,3:24:5.61:0,6,502	0/1:30,1:30:24.88:25,0,327	0/0:10,0:10:21.07:0,21,310	0/1:17,0:17:26.35:26,0,227	0/1:18,1:19:3.45:3,0,334	0/1:11,0:11:6.79:7,0,207	0/0:16,0:16:38.80:0,39,554	0/1:13,1:14:0.39:0,0,417	0/1:17,0:17:6.31:6,0,336	0/1:21,1:22:14.89:15,0,538	0/1:14,0:26:4.86:96,0,5	1/1:11,12:24:24.98:445,25,0	0/0:14,0:13:18.04:0,18,188	0/0:29,1:30:32.67:0,33,666	0/1:10,4:14:45.48:45,0,207	0/1:12,4:16:46.13:46,0,174	0/1:19,2:21:30.91:31,0,415	0/0:23,0:24:42.14:0,42,630	0/1:14,1:15:12.46:12,0,231	0/0:28,0:28:51.10:0,51,513	0/1:21,1:22:3.42:3,0,270	0/1:9,1:11:20.54:21,0,217
chr10	99588327	.	T	TTG	1348.63	PASS	AB=0.807;AC=30;AF=0.682;AN=44;BaseQRankSum=-1.511;DP=334;FS=0.000;HRun=0;HaplotypeScore=92.0286;InbreedingCoeff=-0.1198;MQ=40.07;MQ0=8;MQRankSum=0.083;QD=6.07;ReadPosRankSum=-0.399;VQSLOD=2.5781;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:6.02:83,6,0	1/1:2,0:3:5.90:42,6,0	./.	./.	./.	1/1:9,9:18:9.03:133,9,0	1/1:7,1:8:3.01:44,3,0	./.	1/1:15,1:15:3.01:44,3,0	0/0:15,0:15:3:0,3,32	0/0:6,0:7:5.85:0,6,45	0/1:6,3:9:20.21:121,0,20	0/1:12,0:12:13.96:14,0,25	1/1:7,3:10:9.03:126,9,0	1/1:9,2:10:6.02:88,6,0	1/1:4,2:6:6.02:88,6,0	0/1:9,2:12:20.21:102,0,20	0/1:4,2:7:34.02:109,0,34	./.	1/1:13,1:13:3.01:44,3,0	0/1:14,0:11:16.95:17,0,26	1/1:14,0:15:6.01:69,6,0	1/1:8,1:10:2.97:20,3,0	0/1:4,4:8:23.21:78,0,23	0/0:9,0:9:2.56:0,3,33	0/1:13,3:18:12.53:57,0,13	0/1:13,6:18:14.18:203,0,14	./.
chr10	99589077	.	GC	G	9676.93	PASS	AB=0.583;AC=43;AF=0.768;AN=56;BaseQRankSum=5.429;DP=541;FS=0.428;HRun=9;HaplotypeScore=57.5686;InbreedingCoeff=0.8975;MQ=78.79;MQ0=0;MQRankSum=-2.062;QD=21.94;ReadPosRankSum=3.444;VQSLOD=5.5929;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,35:44:96.03:878,96,0	1/1:1,8:9:21.01:192,21,0	0/0:12,0:12:30.07:0,30,331	0/0:13,0:13:20.97:0,21,197	0/0:17,0:17:45.13:0,45,516	1/1:3,20:23:59.38:548,59,0	1/1:2,22:24:63.03:576,63,0	1/1:3,14:17:39:352,39,0	1/1:1,13:14:26.02:268,26,0	0/0:17,0:17:45.12:0,45,511	0/0:20,0:20:54.13:0,54,602	1/1:1,27:28:72.04:659,72,0	1/1:1,18:19:48.01:439,48,0	1/1:4,17:21:48.01:439,48,0	1/1:1,19:20:45.02:412,45,0	1/1:2,21:23:25.42:487,25,0	1/1:1,20:21:54.03:494,54,0	1/1:1,19:20:51.03:467,51,0	1/1:2,11:13:30.01:272,30,0	1/1:2,17:19:42.90:386,43,0	1/1:2,23:25:62.96:566,63,0	1/1:1,12:13:33.02:302,33,0	1/1:3,13:16:35.96:329,36,0	1/1:1,19:20:57.03:522,57,0	0/0:21,0:21:60.18:0,60,693	0/1:4,10:14:33.19:238,0,33	1/1:4,20:24:57.03:521,57,0	1/1:2,12:14:36.02:328,36,0
chr10	99590390	.	AC	A	2793.74	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=2.099;DP=539;FS=9.346;HRun=2;HaplotypeScore=69.8714;InbreedingCoeff=0.5875;MQ=69.21;MQ0=69;MQRankSum=-1.408;QD=6.02;ReadPosRankSum=-0.915;VQSLOD=-0.3934;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:25:14.03:117,14,0	1/1:13,0:12:5.75:26,6,0	0/0:33,1:23:42.07:0,42,540	0/0:31,0:23:63.11:0,63,643	1/1:12,0:9:5.85:45,6,0	1/1:22,0:19:1.55:4,2,0	1/1:26,0:21:9.38:59,9,0	1/1:17,1:14:39.08:441,39,0	./.	1/1:16,1:14:31.38:292,31,0	1/1:12,1:10:9.12:71,9,0	1/1:27,0:25:9.33:22,9,0	1/1:18,1:17:17.04:98,17,0	1/1:16,0:15:15.48:95,15,0	1/1:18,1:15:15.58:114,16,0	1/1:22,1:19:9.21:38,9,0	1/1:12,6:13:27.23:230,27,0	1/1:16,3:13:9.13:85,9,0	1/1:11,0:10:21.17:248,21,0	1/1:13,0:12:4.66:11,5,0	1/1:35,0:31:25.18:167,25,0	1/1:15,0:12:9.22:53,9,0	1/1:13,1:10:1.55:4,2,0	1/1:22,0:20:6.19:32,6,0	1/1:13,1:13:18.95:172,19,0	1/1:23,0:21:49.21:450,49,0	1/1:18,0:14:4.56:42,5,0	1/1:6,0:5:1.55:4,2,0
chr10	99590391	.	C	CACA	7117.74	PASS	AB=0.568;AC=49;AF=0.907;AN=54;BaseQRankSum=-5.833;DP=602;FS=5.069;HRun=0;HaplotypeScore=93.9779;InbreedingCoeff=0.4948;MQ=66.74;MQ0=69;MQRankSum=-0.736;QD=13.56;ReadPosRankSum=-0.394;VQSLOD=4.2663;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,1:29:15.05:252,15,0	1/1:1,7:13:8.89:163,9,0	0/0:34,0:23:41.85:0,42,539	0/0:31,0:23:54.74:0,55,632	1/1:3,0:12:8.43:71,8,0	1/1:2,18:21:1.76:72,2,0	1/1:3,1:25:11.83:197,12,0	1/1:4,0:17:45.08:591,45,0	./.	1/1:3,0:15:38.93:496,39,0	1/1:2,0:10:12.30:119,12,0	1/1:1,21:25:18.42:347,18,0	1/1:8,2:23:25.58:485,26,0	1/1:1,0:16:18.06:399,18,0	1/1:2,0:16:17.99:311,18,0	1/1:3,17:23:18.43:351,18,0	1/1:16,0:13:0.41:158,0,0	0/1:6,12:19:2.68:139,0,3	1/1:3,6:10:27.08:422,27,0	1/1:3,13:16:9.03:222,9,0	1/1:3,1:32:30.44:500,30,0	1/1:4,10:18:8.76:186,9,0	1/1:3,9:12:3.01:74,3,0	1/1:4,18:25:8.38:194,8,0	1/1:1,0:13:18.97:176,19,0	1/1:2,1:23:60.19:969,60,0	1/1:1,12:15:9.03:152,9,0	1/1:0,7:8:3.01:74,3,0
chr10	99596954	.	G	GGTGT	3227.04	PASS	AB=0.752;AC=38;AF=0.704;AN=54;BaseQRankSum=6.813;DP=525;FS=2.525;HRun=0;HaplotypeScore=163.9278;InbreedingCoeff=0.5223;MQ=57.07;MQ0=8;MQRankSum=-3.969;QD=9.06;ReadPosRankSum=0.872;VQSLOD=3.1856;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:38:14.20:92,14,0	1/1:4,0:6:5.67:29,6,0	0/0:33,0:16:9.96:0,10,261	0/0:37,0:23:31.68:0,32,374	0/0:23,0:23:54.16:0,54,856	0/1:15,0:21:33.63:44,0,34	1/1:7,0:12:18.44:77,18,0	1/1:27,3:30:51.10:807,51,0	0/1:16,0:21:29.95:102,0,30	0/0:22,0:21:48.15:0,48,753	0/0:23,0:23:54.16:0,54,847	1/1:9,0:17:22.18:107,22,0	1/1:6,0:11:9.39:88,9,0	1/1:12,0:18:16.10:80,16,0	1/1:9,0:19:8.64:67,9,0	1/1:8,0:13:6.56:26,7,0	0/1:17,0:19:59.83:78,0,60	1/1:12,0:18:31.22:203,31,0	1/1:6,5:11:19.76:286,20,0	1/1:10,9:20:2.79:17,3,0	1/1:10,1:11:11.73:146,12,0	1/1:4,0:5:2.68:11,3,0	1/1:13,0:19:15.87:66,16,0	./.	0/0:17,0:17:45.15:0,45,752	0/1:6,8:13:21.44:392,0,21	1/1:10,4:14:24.55:475,25,0	1/1:3,5:7:9.03:222,9,0
chr10	99598534	.	AG	A	5170.67	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.546;DP=636;FS=1.128;HRun=2;HaplotypeScore=63.9189;InbreedingCoeff=0.9993;MQ=80.64;MQ0=0;MQRankSum=-2.999;QD=35.66;ReadPosRankSum=-0.855;VQSLOD=4.9004;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1527	0/0:19,0:19:54.18:0,54,808	0/0:19,0:19:48.09:0,48,661	0/0:17,0:17:51.16:0,51,722	0/0:31,0:31:93.31:0,93,1390	0/0:29,0:29:87.28:0,87,1280	0/0:21,0:21:63.21:0,63,944	1/1:0,27:27:78.24:998,78,0	0/0:23,0:23:69.21:0,69,993	0/0:21,0:21:63.21:0,63,943	0/0:25,0:25:75.24:0,75,1099	0/0:21,0:21:63.20:0,63,923	0/0:20,0:20:57.18:0,57,834	0/0:21,0:21:63.20:0,63,919	0/0:33,0:33:93.30:0,93,1373	0/0:29,0:29:87.29:0,87,1285	0/0:22,0:22:66.22:0,66,986	0/0:20,0:20:60.11:0,60,832	1/1:0,16:16:48.11:604,48,0	1/1:0,24:24:69.22:888,69,0	1/1:2,20:22:54.18:701,54,0	0/0:29,0:29:87.29:0,87,1283	0/0:15,0:15:42.11:0,42,601	0/0:21,0:21:63.20:0,63,924	0/0:19,0:19:57.19:0,57,854	1/1:1,22:23:24.25:812,24,0	1/1:0,25:25:66.09:856,66,0	1/1:0,8:8:24.08:312,24,0
chr10	99598659	.	CT	C	6388.55	PASS	AB=0.559;AC=40;AF=0.714;AN=56;BaseQRankSum=9.206;DP=648;FS=20.709;HRun=11;HaplotypeScore=99.0302;InbreedingCoeff=0.8382;MQ=73.68;MQ0=0;MQRankSum=-3.893;QD=13.45;ReadPosRankSum=2.398;VQSLOD=3.3806;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:53.92:443,54,0	0/1:1,9:10:2.02:192,0,2	0/0:15,1:16:14.56:0,15,301	0/0:13,0:14:26.48:0,26,220	0/0:30,1:34:68.09:0,68,880	1/1:4,28:32:77.90:640,78,0	1/1:1,16:17:47.94:394,48,0	1/1:5,0:36:63.32:202,63,0	1/1:3,15:18:35.93:296,36,0	0/0:36,0:36:78.16:0,78,821	0/0:23,2:26:19.72:0,20,604	1/1:4,22:26:56.91:468,57,0	1/1:6,10:17:34.97:276,35,0	1/1:0,17:17:47.95:394,48,0	1/1:6,22:29:61.94:498,62,0	1/1:5,24:29:68.91:567,69,0	0/0:18,0:20:47.95:0,48,494	1/1:3,15:20:49.02:381,49,0	1/1:5,0:16:18.64:59,19,0	1/1:4,0:33:57.50:166,58,0	1/1:2,0:17:28.51:83,29,0	1/1:4,20:24:59.92:493,60,0	0/1:8,17:26:46.69:276,0,47	1/1:1,13:14:32.96:271,33,0	0/0:26,0:27:72.01:0,72,743	1/1:9,0:28:7.52:80,8,0	1/1:6,0:31:48.88:141,49,0	1/1:1,0:13:24.43:71,24,0
chr10	99598729	.	ATCTGTATGG	A	9735.63	PASS	AB=0.547;AC=13;AF=0.232;AN=56;BaseQRankSum=15.417;DP=697;FS=2.117;HRun=0;HaplotypeScore=206.5206;InbreedingCoeff=0.8945;MQ=85.43;MQ0=0;MQRankSum=-14.470;QD=62.01;ReadPosRankSum=-1.868;VQSLOD=4.3347;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:75.26:0,75,3499	0/0:13,0:13:39.13:0,39,1861	0/0:23,0:23:63.20:0,63,2299	0/0:26,0:26:75.26:0,75,3002	0/0:36,0:36:99:0,108,5047	0/0:39,0:39:99:0,111,5145	0/0:21,0:21:60.21:0,60,2864	1/1:6,23:29:69.08:1635,69,0	0/0:27,0:27:78.27:0,78,3767	0/0:33,0:33:96.33:0,96,4491	0/0:33,0:33:99:0,99,4602	0/0:30,0:30:87.30:0,87,4128	0/0:18,0:18:51.18:0,51,2400	0/0:25,0:25:75.26:0,75,3549	0/0:32,0:32:90.30:0,90,4218	0/0:28,0:28:84.29:0,84,3866	0/0:21,0:21:60.21:0,60,2836	0/0:12,0:12:36.12:0,36,1682	1/1:5,5:10:18.05:491,18,0	1/1:1,23:24:69.23:1873,69,0	1/1:2,8:10:14.59:295,15,0	0/0:31,0:31:93.32:0,93,4380	0/0:22,0:22:66.23:0,66,3147	0/0:20,0:20:54.19:0,54,2592	0/0:23,0:23:69.22:0,69,3205	0/1:6,29:35:53.94:2374,0,54	1/1:4,31:35:75.25:2045,75,0	1/1:3,11:14:33.11:1022,33,0
chr10	99602125	.	AG	A	4253.31	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.341;DP=531;FS=0.780;HRun=5;HaplotypeScore=56.9966;InbreedingCoeff=0.9980;MQ=65.64;MQ0=0;MQRankSum=-0.712;QD=31.74;ReadPosRankSum=-1.145;VQSLOD=4.9072;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.28:0,84,1133	0/0:12,0:12:33.08:0,33,431	0/0:18,0:17:45.10:0,45,592	0/0:16,0:16:33.10:0,33,429	0/0:21,0:21:60.20:0,60,817	0/0:9,0:9:27.09:0,27,369	0/0:24,0:24:69.23:0,69,941	1/1:1,20:21:57.16:646,57,0	0/0:17,0:17:45.15:0,45,616	0/0:11,0:11:27.09:0,27,366	0/0:17,0:17:45.15:0,45,615	0/0:17,0:17:42.13:0,42,560	0/0:20,0:20:57.19:0,57,779	0/0:17,0:17:42.14:0,42,574	0/0:18,0:18:51.17:0,51,698	0/0:27,0:27:78.26:0,78,1064	0/0:25,0:25:75.25:0,75,1026	0/0:12,0:12:33.11:0,33,451	1/1:1,14:15:42.10:466,42,0	1/1:5,27:32:90.25:1015,90,0	1/1:0,14:14:42.12:476,42,0	0/0:16,0:16:45.15:0,45,614	0/0:15,0:15:42.14:0,42,573	0/0:26,0:26:75.21:0,75,1005	0/0:29,0:29:78.26:0,78,1066	1/1:0,18:18:54.14:602,54,0	1/1:1,24:25:75.21:844,75,0	1/1:3,6:9:18.05:204,18,0
chr10	99602130	.	GT	G	968.53	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=14.920;DP=539;FS=0.372;HRun=1;HaplotypeScore=66.7219;InbreedingCoeff=0.7805;MQ=65.13;MQ0=0;MQRankSum=-0.787;QD=6.97;ReadPosRankSum=1.327;VQSLOD=0.5598;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.27:0,90,1320	0/0:11,0:11:33.10:0,33,483	0/0:19,0:18:53.99:0,54,743	0/0:12,0:12:27.09:0,27,414	0/0:23,0:23:66.18:0,66,934	0/0:10,0:10:30.09:0,30,438	0/0:26,0:26:78.22:0,78,1129	0/1:23,0:23:31.43:101,0,31	0/0:15,0:15:45.15:0,45,688	0/0:13,0:13:36.11:0,36,493	0/0:19,0:19:57.08:0,57,776	0/0:16,0:16:42.13:0,42,617	0/0:19,0:19:57.19:0,57,859	0/0:15,0:15:45.11:0,45,648	0/0:19,0:19:57.17:0,57,818	0/0:27,0:27:81.26:0,81,1210	0/0:27,0:27:81.24:0,81,1194	0/0:12,0:12:36.11:0,36,528	0/1:19,0:19:64.23:64,0,76	1/1:28,4:32:57.25:383,57,0	1/1:14,0:14:35.44:134,35,0	0/0:16,0:16:48.15:0,48,710	0/0:15,0:15:42.14:0,42,642	0/0:26,0:26:78.25:0,78,1166	0/0:30,0:30:87.24:0,87,1239	1/1:19,0:19:14.63:92,15,0	1/1:25,1:26:50.38:307,50,0	1/1:6,0:6:15.83:66,16,0
chr10	99602418	.	C	CT	2982.77	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=9.947;DP=518;FS=0.000;HRun=4;HaplotypeScore=85.2675;InbreedingCoeff=0.4095;MQ=78.50;MQ0=0;MQRankSum=0.718;QD=9.62;ReadPosRankSum=2.752;VQSLOD=0.5338;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:12.57:0,13,254	0/1:6,0:6:5.69:6,0,19	0/0:20,0:18:21.65:0,22,259	0/0:20,0:19:24.15:0,24,163	0/0:17,0:17:37.07:0,37,374	0/1:11,0:11:4.86:5,0,25	0/1:28,0:28:10.84:11,0,72	1/1:5,31:36:92.92:977,93,0	0/1:19,0:19:9.15:9,0,49	0/0:17,0:17:44.84:0,45,444	0/0:7,0:7:17.62:0,18,165	0/0:18,0:18:8.55:0,9,143	0/0:18,0:18:3.07:0,3,97	0/1:20,0:20:6.38:6,0,117	0/0:23,0:23:14.14:0,14,185	0/1:18,0:18:2.60:3,0,57	0/1:35,0:34:5.51:6,0,217	1/1:12,0:12:10.88:44,11,0	1/1:1,19:24:68.53:649,69,0	1/1:1,8:9:17.24:192,17,0	1/1:1,12:13:15.05:186,15,0	0/1:7,0:7:25.95:29,0,26	0/0:5,0:5:6.65:0,7,74	0/1:24,0:24:1.42:1,0,189	0/0:7,0:7:18.03:0,18,188	1/1:4,13:18:15.95:318,16,0	1/1:9,11:19:44.76:478,45,0	1/1:2,7:9:23.06:254,23,0
chr10	99602422	.	T	TA	3657.56	PASS	AB=0.856;AC=35;AF=0.625;AN=56;BaseQRankSum=-2.502;DP=510;FS=9.523;HRun=13;HaplotypeScore=72.2436;InbreedingCoeff=0.2429;MQ=75.85;MQ0=0;MQRankSum=-1.304;QD=8.45;ReadPosRankSum=5.082;VQSLOD=2.0398;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,38:57:2.05:520,2,0	0/1:2,4:6:1.19:72,0,1	0/0:17,0:16:14.28:0,14,119	0/0:20,0:18:11.82:0,12,94	0/1:14,2:16:12.30:12,0,168	1/1:3,9:13:3.28:161,3,0	1/1:5,22:28:38.03:366,38,0	1/1:34,0:34:0.98:101,1,0	1/1:3,13:16:21.02:195,21,0	0/0:18,0:18:35.22:0,35,234	0/0:7,0:7:8.84:0,9,62	1/1:7,11:21:6.10:162,6,0	1/1:6,11:17:21.02:194,21,0	1/1:9,11:21:28.78:223,29,0	1/1:8,13:21:18.02:167,18,0	1/1:4,11:15:16.24:250,16,0	0/1:11,20:31:13.51:353,0,14	1/1:2,12:14:15.22:187,15,0	0/1:24,0:24:3.15:64,0,3	0/1:9,0:8:30.28:39,0,30	1/1:12,0:12:13.23:52,13,0	1/1:1,5:7:17.86:154,18,0	0/0:5,0:5:2.91:0,3,20	0/1:8,13:24:5.25:245,0,5	0/0:9,0:9:20.78:0,21,140	0/1:15,0:15:17.50:25,0,18	0/1:20,0:19:24.83:72,0,25	0/1:11,0:11:17.36:44,0,17
chr10	99602676	.	T	TACACACACACACAC	2197.51	PASS	AB=0.945;AC=42;AF=0.808;AN=52;BaseQRankSum=-3.863;DP=381;FS=14.427;HRun=0;HaplotypeScore=128.8889;InbreedingCoeff=-0.1158;MQ=59.30;MQ0=7;MQRankSum=-2.320;QD=6.54;ReadPosRankSum=3.417;VQSLOD=1.5262;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:23:8.96:121,9,0	1/1:4,0:4:3.01:49,3,0	1/1:20,0:14:2.94:18,3,0	./.	0/1:16,0:19:27.34:27,0,496	1/1:5,0:12:6.02:200,6,0	1/1:15,0:15:9.01:134,9,0	1/1:17,0:12:5.81:97,6,0	0/1:10,0:10:32.84:33,0,105	0/1:18,0:18:10.34:10,0,112	0/0:8,0:8:12.02:0,12,295	1/1:6,0:12:2.99:23,3,0	0/1:8,0:7:8.34:65,0,8	0/1:5,0:6:43.44:91,0,43	1/1:18,0:17:8.84:59,9,0	1/1:7,0:7:12.01:146,12,0	1/1:11,12:27:6.02:272,6,0	1/1:9,0:8:3.01:44,3,0	1/1:3,0:12:18.06:345,18,0	1/1:6,0:5:3.47:26,3,0	0/1:25,0:24:33.27:33,0,50	1/1:13,0:13:15.04:238,15,0	./.	0/1:18,0:20:8.35:110,0,8	0/1:9,0:11:6.94:7,0,342	1/1:7,0:7:3.01:39,3,0	1/1:3,0:9:3.01:109,3,0	1/1:2,0:2:3.01:40,3,0
chr10	99602743	.	TACAC	T	1466.56	PASS	AB=0.667;AC=11;AF=0.212;AN=52;BaseQRankSum=-0.592;DP=374;FS=9.083;HRun=0;HaplotypeScore=78.4198;InbreedingCoeff=0.0054;MQ=42.04;MQ0=31;MQRankSum=-0.679;QD=11.92;ReadPosRankSum=3.199;VQSLOD=1.8662;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:29.05:0,29,404	0/0:1,0:1:3.01:0,3,72	0/0:27,0:1:3.01:0,3,72	./.	0/0:10,0:9:12.02:0,12,227	0/0:16,0:18:38.66:0,39,649	0/1:4,9:12:99:218,0,122	0/0:11,0:8:13.23:0,13,166	0/1:5,3:8:76.51:157,0,77	0/0:8,0:6:10.27:0,10,169	./.	0/1:8,6:14:99:215,0,169	0/1:8,5:11:77.46:77,0,268	1/1:4,4:6:6.02:96,6,0	0/1:6,6:12:54.52:211,0,55	0/1:5,9:16:99:331,0,239	0/0:12,0:11:5.98:0,6,81	0/0:14,0:13:29.77:0,30,444	0/0:14,0:8:17.89:0,18,301	0/0:6,0:5:3.01:0,3,70	0/0:26,0:24:5.65:0,6,124	0/0:6,0:6:5.82:0,6,80	1/1:5,0:3:6.01:77,6,0	0/1:18,14:31:99:226,0,255	0/0:9,0:7:6.02:0,6,122	0/0:7,0:8:23.18:0,23,365	0/0:10,0:9:13.24:0,13,169	0/0:2,0:3:9.01:0,9,125
chr10	99602816	.	TACACACACAC	T	320.75	PASS	AB=0.960;AC=6;AF=0.120;AN=50;BaseQRankSum=3.291;DP=439;FS=2.304;HRun=0;HaplotypeScore=137.3310;InbreedingCoeff=0.5120;MQ=45.66;MQ0=33;MQRankSum=-2.900;QD=6.05;ReadPosRankSum=-0.840;VQSLOD=1.8933;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,2:20:17.18:36,0,17	./.	./.	./.	0/0:13,0:11:12.04:0,12,461	1/1:12,4:16:11.17:305,11,0	0/0:25,0:27:17.31:0,17,612	0/0:13,0:10:9.03:0,9,295	0/0:8,0:8:9.03:0,9,290	0/0:10,0:9:18.06:0,18,769	0/0:12,0:11:18.06:0,18,614	0/0:14,0:16:9.92:0,10,355	0/0:12,0:11:12.49:0,12,376	0/0:19,0:17:27.09:0,27,1189	0/0:16,0:14:18.53:0,19,772	0/0:17,0:17:18.04:0,18,678	0/0:13,0:10:15.05:0,15,263	1/1:7,1:8:3.01:89,3,0	0/0:9,0:6:3.01:0,3,131	0/0:15,0:13:15.02:0,15,417	0/0:25,0:23:12:0,12,462	0/1:6,0:6:0:0,0,0	0/0:7,0:7:9.92:0,10,404	0/0:36,0:33:18.86:0,19,795	0/0:17,0:17:30.10:0,30,1114	0/0:24,0:19:29.97:0,30,929	0/0:20,0:18:28.65:0,29,940	0/0:5,0:4:12.04:0,12,387
chr10	99602863	.	AGT	A	1211.63	PASS	AB=0.980;AC=31;AF=0.574;AN=54;BaseQRankSum=4.655;DP=440;FS=30.916;HRun=0;HaplotypeScore=86.9690;InbreedingCoeff=0.1121;MQ=50.51;MQ0=26;MQRankSum=1.525;QD=3.65;ReadPosRankSum=0.117;VQSLOD=0.2873;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:24:0.85:2,1,0	./.	0/0:14,0:4:11.37:0,11,113	0/0:32,0:7:9.32:0,9,71	0/0:16,0:16:16.32:0,16,426	0/1:20,0:19:6.42:22,0,6	1/1:26,0:25:34.92:168,35,0	0/0:21,0:16:14.14:0,14,138	1/1:11,0:11:14.30:93,14,0	0/1:23,0:23:39.78:40,0,447	0/1:14,0:14:27.30:27,0,207	1/1:15,0:15:9.87:50,10,0	0/1:12,0:12:11.03:33,0,11	1/1:18,1:18:11.29:138,11,0	0/1:19,1:18:11.50:96,0,11	1/1:13,0:12:14.18:95,14,0	0/1:7,0:6:3.93:16,0,4	0/1:8,0:8:1.86:50,0,2	0/1:10,1:7:0.22:0,0,76	0/1:10,0:9:2.58:17,0,3	0/0:25,0:23:2.60:0,3,22	1/1:11,0:11:21.35:90,21,0	1/1:8,0:6:12.80:55,13,0	1/1:26,0:22:18.18:198,18,0	0/1:22,0:22:21.97:22,0,317	0/1:14,0:13:2.56:71,0,3	0/1:11,2:12:3.37:79,0,3	0/1:3,0:2:12.92:13,0,13
chr10	99602865	.	TGAGAGAGA	T	1136.80	PASS	AB=0.571;AC=11;AF=0.204;AN=54;BaseQRankSum=-0.315;DP=441;FS=34.362;HRun=0;HaplotypeScore=115.8187;InbreedingCoeff=0.6673;MQ=50.76;MQ0=25;MQRankSum=-3.931;QD=16.72;ReadPosRankSum=-0.490;VQSLOD=1.0869;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:25:3:0,3,25	./.	0/0:14,0:4:8.24:0,8,174	0/0:34,0:7:11.58:0,12,121	0/0:16,0:16:35.87:0,36,1244	0/0:6,0:18:12.61:0,13,86	0/0:24,0:27:39.08:0,39,742	1/1:11,10:16:15.18:293,15,0	0/0:4,0:12:12.03:0,12,223	0/0:23,0:24:60.21:0,60,1937	0/0:14,0:14:21.05:0,21,685	0/0:14,0:15:8.82:0,9,159	0/0:5,0:11:12.02:0,12,255	0/0:11,0:18:21.03:0,21,294	0/0:18,0:18:21.06:0,21,382	0/0:4,0:11:6.02:0,6,130	0/0:7,0:6:9.92:0,10,181	0/1:2,0:8:5.32:5,0,60	1/1:7,3:7:6.02:125,6,0	0/0:7,3:9:2.98:0,3,22	0/0:13,12:23:0:0,0,0	0/0:12,0:12:27.09:0,27,584	0/0:7,0:7:18.04:0,18,338	0/0:24,0:21:34.47:0,34,657	0/0:21,0:21:27.09:0,27,1078	1/1:4,10:13:14.54:475,15,0	1/1:6,6:12:14.70:333,15,0	1/1:3,0:2:3.01:58,3,0
chr10	99607248	.	CCT	C	228.89	PASS	AB=0.938;AC=14;AF=0.269;AN=52;BaseQRankSum=1.750;DP=496;FS=0.000;HRun=0;HaplotypeScore=128.3119;InbreedingCoeff=0.6151;MQ=57.61;MQ0=8;MQRankSum=0.697;QD=1.63;ReadPosRankSum=2.085;VQSLOD=1.8149;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:26:3.35:16,3,0	0/0:8,0:8:6.02:0,6,81	./.	0/0:24,0:16:0:0,0,1	1/1:3,15:18:8.66:62,9,0	1/1:20,0:23:18.50:83,19,0	0/0:14,0:14:8.99:0,9,75	0/0:45,0:43:27.39:0,27,169	1/1:8,0:8:2.60:10,3,0	0/0:18,0:18:10.87:0,11,360	0/1:12,2:13:18.75:19,0,126	0/0:10,0:12:21.42:0,21,186	0/0:14,0:15:3.40:0,3,19	0/0:10,0:10:12.36:0,12,84	0/0:18,0:22:14.48:0,14,109	0/1:24,0:24:1.41:1,0,42	0/0:14,0:13:10.28:0,10,63	1/1:9,2:14:18.70:101,19,0	0/0:13,0:15:17.61:0,18,120	0/0:29,0:29:22.46:0,22,141	./.	0/0:11,0:20:5.37:0,5,34	0/0:11,0:11:15.02:0,15,175	0/0:10,0:11:12:0,12,114	1/1:5,6:13:11.70:95,12,0	0/0:22,0:22:38.18:0,38,287	0/0:15,0:14:14.58:0,15,104	0/0:12,0:11:12.68:0,13,75
chr10	99607252	.	T	TCT	1152.59	PASS	AB=1.000;AC=37;AF=0.712;AN=52;BaseQRankSum=1.124;DP=501;FS=11.738;HRun=0;HaplotypeScore=128.2465;InbreedingCoeff=0.6183;MQ=55.16;MQ0=8;MQRankSum=-0.999;QD=3.47;ReadPosRankSum=-1.177;VQSLOD=1.6549;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:0.81:0,1,19	1/1:9,0:9:2.37:9,2,0	./.	0/1:21,0:14:0:1,0,0	0/0:22,0:22:7.21:0,7,39	0/0:23,0:23:20.14:0,20,120	1/1:13,0:13:5.99:50,6,0	1/1:41,0:39:0.91:2,1,0	1/1:10,0:10:2.60:10,3,0	0/0:20,0:20:0.44:0,0,229	0/0:15,0:14:14.84:0,15,129	1/1:12,0:12:15.46:144,15,0	1/1:8,5:13:3.48:33,3,0	1/1:11,0:11:7.82:71,8,0	1/1:25,0:24:16.24:162,16,0	1/1:24,0:24:9.14:60,9,0	1/1:14,0:13:6.89:45,7,0	0/0:13,0:13:15.82:0,16,76	1/1:14,0:13:7.63:41,8,0	1/1:28,0:28:23.42:153,23,0	./.	1/1:20,0:20:6.02:86,6,0	1/1:16,0:14:7.77:111,8,0	1/1:12,0:12:5.96:45,6,0	0/0:16,0:16:11.36:0,11,56	1/1:21,0:21:27.07:168,27,0	1/1:15,0:14:14.46:81,14,0	1/1:12,0:11:9.40:44,9,0
chr10	99607273	.	CTCTCTCTCTGTGTGTGTG	C	1855.93	PASS	AB=0.952;AC=6;AF=0.115;AN=52;BaseQRankSum=0.653;DP=494;FS=15.386;HRun=0;HaplotypeScore=236.2517;InbreedingCoeff=0.1416;MQ=46.65;MQ0=6;MQRankSum=-2.644;QD=16.87;ReadPosRankSum=-1.358;VQSLOD=1.1611;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,4:30:17.32:296,17,0	0/0:9,0:9:12.04:0,12,412	./.	./.	0/0:32,0:32:0.29:0,0,1716	0/1:19,6:25:17.69:1172,0,18	0/0:13,0:13:5.88:0,6,369	0/0:35,0:32:74.83:0,75,1326	0/0:12,0:12:3.01:0,3,153	0/0:24,0:24:68.04:0,68,3022	0/0:12,0:11:27.09:0,27,1501	0/1:15,0:15:11.63:12,0,844	0/0:15,0:14:0.32:0,0,184	0/0:14,0:14:9.13:0,9,508	0/1:25,0:24:4.10:4,0,797	0/0:26,0:26:10.39:0,10,345	0/0:13,0:12:22.42:0,22,758	0/1:15,0:14:11.93:491,0,12	0/0:12,0:11:30.03:0,30,867	0/0:25,0:26:44.08:0,44,1101	0/0:11,0:11:3.90:0,4,55	0/0:18,0:18:18.06:0,18,523	0/0:20,0:18:33.67:0,34,1051	0/0:14,0:14:18.01:0,18,483	0/0:16,0:16:24.08:0,24,1083	0/0:26,0:26:78.27:0,78,3239	0/0:17,0:17:24.55:0,25,804	0/0:9,0:8:18.05:0,18,611
chr10	99607281	.	CTG	C	545.62	PASS	AB=0.904;AC=22;AF=0.393;AN=56;BaseQRankSum=1.646;DP=491;FS=0.633;HRun=0;HaplotypeScore=145.5900;InbreedingCoeff=0.4001;MQ=45.43;MQ0=8;MQRankSum=1.690;QD=2.27;ReadPosRankSum=1.322;VQSLOD=2.7164;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:27:1.84:15,2,0	0/1:9,0:9:20.04:30,0,20	0/0:5,0:2:2.99:0,3,23	0/0:5,0:3:2.97:0,3,20	0/0:34,0:34:11.47:0,11,238	0/1:14,0:21:30.90:31,0,33	1/1:10,2:12:5.87:35,6,0	0/0:38,0:35:56.53:0,57,362	1/1:0,12:12:3.01:35,3,0	0/0:25,0:26:34.49:0,34,576	0/0:11,0:11:11.70:0,12,182	0/1:11,1:13:5.74:42,0,6	1/1:16,0:15:14.56:94,15,0	1/1:11,1:13:10.88:64,11,0	1/1:23,2:24:17.27:114,17,0	1/1:22,0:22:3.01:35,3,0	0/1:17,0:16:0.51:1,0,123	0/1:13,0:13:2.86:18,0,3	0/0:12,0:11:9.53:0,10,58	0/0:25,0:25:14.31:0,14,97	0/0:12,0:12:2.92:0,3,17	1/1:18,0:18:14:94,14,0	0/1:18,2:19:23.15:115,0,23	0/0:6,0:11:4.77:0,5,23	0/0:19,0:19:10.41:0,10,136	0/0:27,0:27:52.42:0,52,439	0/0:17,0:17:17.71:0,18,140	0/0:8,0:7:11.98:0,12,124
chr10	99607297	.	G	GTC	2342.74	PASS	AB=0.736;AC=13;AF=0.232;AN=56;BaseQRankSum=-1.099;DP=523;FS=4.599;HRun=0;HaplotypeScore=152.0824;InbreedingCoeff=0.5095;MQ=47.03;MQ0=16;MQRankSum=-3.103;QD=12.94;ReadPosRankSum=-0.592;VQSLOD=2.8457;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:7.34:0,7,41	0/0:10,0:10:11.96:0,12,128	0/0:23,0:6:17.75:0,18,120	0/0:18,0:10:19.38:0,19,145	0/0:29,0:29:44.96:0,45,614	0/1:28,0:27:26.80:27,0,194	0/0:14,0:14:20.78:0,21,149	1/1:15,20:34:84.04:910,84,0	0/0:13,0:13:8.96:0,9,68	0/0:27,0:26:77.51:0,78,946	0/0:12,0:12:30.06:0,30,374	0/0:13,0:13:28.61:0,29,249	0/0:14,0:13:19.59:0,20,122	0/0:15,0:15:18.88:0,19,156	0/0:23,0:22:24.76:0,25,186	0/1:17,0:17:5.63:6,0,38	0/0:14,0:14:23.51:0,24,206	0/0:12,0:11:17.25:0,17,90	1/1:9,1:8:9.19:178,9,0	1/1:10,16:26:15.01:192,15,0	1/1:1,16:17:3.01:35,3,0	0/0:13,0:13:22:0,22,136	0/0:27,0:25:52.72:0,53,410	0/0:15,0:13:14.92:0,15,112	0/0:18,0:18:33.08:0,33,445	0/1:7,19:26:56.67:817,0,57	0/1:1,14:15:0.86:190,0,1	0/1:2,5:6:4.94:154,0,5
chr10	99607341	.	ATAAT	A	2751.28	PASS	AB=0.565;AC=5;AF=0.093;AN=54;BaseQRankSum=7.805;DP=473;FS=0.519;HRun=0;HaplotypeScore=106.2261;InbreedingCoeff=0.7539;MQ=66.54;MQ0=3;MQRankSum=-7.467;QD=37.18;ReadPosRankSum=2.160;VQSLOD=3.3807;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,31:36:81.16:1288,81,0	0/0:8,0:8:21.07:0,21,533	0/0:15,0:13:8.74:0,9,470	0/0:20,0:19:31.98:0,32,892	0/0:19,0:19:51.17:0,51,1299	1/1:1,23:24:66.18:1167,66,0	0/0:17,0:17:51.16:0,51,1261	0/0:48,0:48:99:0,135,3400	0/0:7,0:7:12.04:0,12,292	0/0:27,0:27:78.27:0,78,2053	0/0:9,0:9:27.09:0,27,696	0/0:9,0:9:27.09:0,27,670	0/0:12,0:12:36.12:0,36,926	0/0:10,0:10:27.08:0,27,661	0/0:15,0:15:39.13:0,39,985	./.	0/0:13,0:13:33.11:0,33,875	0/1:3,10:13:10.80:425,0,11	0/0:10,0:10:27.08:0,27,630	0/0:22,0:22:63.22:0,63,1628	0/0:21,0:21:27.09:0,27,653	0/0:9,0:9:24.08:0,24,648	0/0:23,0:23:69.24:0,69,1796	0/0:22,0:21:45.15:0,45,1114	0/0:16,0:16:48.16:0,48,1262	0/0:27,0:27:72.25:0,72,1813	0/0:13,0:13:14.98:0,15,342	0/0:7,0:7:15.05:0,15,387
chr10	99608394	.	G	GA	6113.56	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-16.113;DP=709;FS=5.484;HRun=7;HaplotypeScore=64.8304;InbreedingCoeff=0.9821;MQ=85.17;MQ0=0;MQRankSum=-1.355;QD=29.39;ReadPosRankSum=-1.684;VQSLOD=4.9126;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,1012	0/0:12,0:12:33.05:0,33,319	0/0:23,0:23:47.62:0,48,431	0/0:22,0:22:27.03:0,27,351	0/0:22,0:22:57.09:0,57,550	0/0:32,0:32:90.14:0,90,869	0/0:21,0:21:51.06:0,51,486	1/1:7,29:36:87.25:1039,87,0	0/0:17,0:17:51.08:0,51,492	0/0:32,0:32:87.14:0,87,840	0/0:28,0:28:69.02:0,69,654	0/0:23,0:23:66.11:0,66,637	0/0:31,0:31:84.10:0,84,799	0/0:20,0:20:40.15:0,40,504	0/0:38,0:38:99:0,102,985	0/0:26,0:26:75.09:0,75,717	1/1:3,35:38:96.29:1160,96,0	0/0:19,0:19:45.07:0,45,434	1/1:7,22:29:69.16:790,69,0	1/1:3,28:31:84.15:980,84,0	1/1:1,14:15:33.10:399,33,0	0/0:24,0:24:66.10:0,66,637	0/0:24,0:24:66.08:0,66,632	0/0:17,0:17:45.07:0,45,435	0/0:31,0:32:92.17:0,92,871	1/1:5,23:28:43.24:804,43,0	1/1:0,27:27:72.22:870,72,0	1/1:0,4:4:6.02:72,6,0
chr10	99608910	.	A	AGAGG	6537.78	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-10.543;DP=468;FS=7.693;HRun=0;HaplotypeScore=77.5388;InbreedingCoeff=0.9422;MQ=84.65;MQ0=0;MQRankSum=-1.979;QD=41.64;ReadPosRankSum=2.872;VQSLOD=4.9903;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:6.54:0,7,459	1/1:1,4:5:12.04:294,12,0	0/0:29,0:25:5.27:0,5,215	0/0:18,0:17:28.67:0,29,413	0/0:25,0:25:57.17:0,57,899	0/0:26,0:26:66.09:0,66,1013	1/1:7,9:17:17.89:385,18,0	0/0:21,0:21:51.14:0,51,739	1/1:7,8:15:24.08:594,24,0	0/0:23,0:23:54.17:0,54,855	0/0:19,0:19:48.16:0,48,803	1/1:5,16:21:36.12:890,36,0	1/1:6,7:14:18.06:434,18,0	1/1:5,8:14:30.06:687,30,0	1/1:3,13:16:30.10:742,30,0	1/1:1,12:13:30.08:742,30,0	0/0:12,0:12:21.06:0,21,327	0/0:12,0:12:24.07:0,24,376	0/0:8,0:8:15.05:0,15,251	0/0:21,0:21:41.90:0,42,590	0/0:19,0:19:45.12:0,45,695	1/1:4,12:17:33.11:815,33,0	1/1:6,11:18:30.10:731,30,0	1/1:1,5:5:9.03:223,9,0	0/0:12,0:12:33.11:0,33,552	0/0:24,0:24:45.14:0,45,709	0/0:17,0:17:39.11:0,39,595	0/0:4,0:4:9.03:0,9,151
chr10	99610722	.	TAAG	T	5458.42	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.831;DP=495;FS=5.754;HRun=0;HaplotypeScore=75.4205;InbreedingCoeff=0.9985;MQ=80.43;MQ0=0;MQRankSum=-5.159;QD=41.35;ReadPosRankSum=0.298;VQSLOD=6.0078;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.14:0,60,1185	0/0:11,0:11:33.11:0,33,714	0/0:11,0:11:33.10:0,33,624	0/0:16,0:16:27.98:0,28,671	0/0:20,0:20:60.18:0,60,1238	0/0:17,0:17:48.13:0,48,1001	0/0:19,0:19:51.16:0,51,1112	1/1:1,25:26:75.20:1193,75,0	0/0:9,0:9:27.09:0,27,610	0/0:23,0:23:69.23:0,69,1476	0/0:14,0:14:39.13:0,39,884	0/0:14,0:14:42.14:0,42,952	0/0:16,0:16:45.15:0,45,1019	0/0:16,0:16:48.14:0,48,1001	0/0:17,0:17:51.16:0,51,1073	0/0:19,0:19:57.18:0,57,1248	0/0:29,0:29:84.22:0,84,1824	0/0:27,0:27:75.24:0,75,1641	1/1:3,23:27:66.14:994,66,0	1/1:1,19:20:51.17:849,51,0	1/1:0,14:14:27.09:450,27,0	0/0:11,0:11:30.09:0,30,636	0/0:17,0:17:48.16:0,48,1070	0/0:19,0:19:57.18:0,57,1247	0/0:18,0:18:54.19:0,54,1224	1/1:1,15:16:45.14:724,45,0	1/1:3,18:21:54.18:899,54,0	1/1:0,8:8:21.07:350,21,0
chr10	99610934	.	G	GA	5342.74	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.501;DP=434;FS=24.605;HRun=2;HaplotypeScore=47.5500;InbreedingCoeff=0.9931;MQ=83.87;MQ0=0;MQRankSum=-2.217;QD=40.48;ReadPosRankSum=-0.070;VQSLOD=2.5759;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.14:0,45,558	0/0:5,0:5:15.05:0,15,186	0/0:18,0:17:45.14:0,45,558	0/0:9,0:9:25.62:0,26,289	0/0:24,0:24:72.23:0,72,892	0/0:19,0:19:51.13:0,51,617	0/0:15,0:15:39.12:0,39,484	1/1:3,18:21:54.16:741,54,0	0/0:9,0:9:27.08:0,27,335	0/0:23,0:23:66.20:0,66,808	0/0:13,0:13:36.07:0,36,429	0/0:11,0:11:33.09:0,33,396	0/0:14,0:14:42.13:0,42,520	0/0:5,0:5:15.05:0,15,186	0/0:10,0:10:30.09:0,30,372	0/0:10,0:10:24.06:0,24,285	0/0:23,0:23:66.65:0,67,793	0/0:19,0:19:57.15:0,57,689	1/1:0,22:22:66.22:950,66,0	1/1:0,13:13:39.13:562,39,0	1/1:0,12:12:33.11:475,33,0	0/0:13,0:13:39.12:0,39,484	0/0:17,0:17:51.14:0,51,618	0/0:13,0:13:36.11:0,36,446	0/0:16,0:16:42.09:0,42,493	1/1:0,27:27:78.24:1103,78,0	1/1:1,20:21:57.19:821,57,0	1/1:0,16:16:48.16:691,48,0
chr10	99611008	.	T	TGC	440.55	PASS	AB=0.875;AC=10;AF=0.185;AN=54;BaseQRankSum=4.426;DP=316;FS=8.083;HRun=0;HaplotypeScore=59.5619;InbreedingCoeff=0.6237;MQ=69.51;MQ0=0;MQRankSum=-1.427;QD=7.87;ReadPosRankSum=-2.044;VQSLOD=1.4061;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:42.08:0,42,555	0/0:4,0:4:6.02:0,6,92	0/0:9,0:8:6.07:0,6,202	0/0:10,0:8:14.25:0,14,159	0/0:15,0:15:39.11:0,39,551	0/0:22,0:22:62.93:0,63,849	0/0:12,0:12:33.10:0,33,480	0/1:8,4:12:8.16:49,0,8	0/0:7,0:7:15.05:0,15,225	0/0:24,0:24:72.23:0,72,1058	0/0:8,0:8:18.06:0,18,276	0/0:9,0:9:24.08:0,24,367	0/0:17,0:17:42.14:0,42,634	0/0:12,0:12:27.08:0,27,390	0/0:9,0:9:24.08:0,24,367	0/0:15,0:15:39.13:0,39,589	0/0:10,0:10:24.08:0,24,353	0/0:13,0:13:30.10:0,30,436	1/1:6,5:11:26.90:295,27,0	1/1:3,2:5:8.99:102,9,0	1/1:4,0:5:0.96:29,1,0	0/0:12,0:12:33.09:0,33,480	0/0:15,0:15:42.13:0,42,615	0/0:10,0:10:12.04:0,12,180	0/0:13,0:13:39.11:0,39,554	0/1:14,0:14:15.49:15,0,45	1/1:8,1:9:9.07:99,9,0	./.
chr10	99611010	.	TG	T	842.43	PASS	AB=0.958;AC=10;AF=0.185;AN=54;BaseQRankSum=1.063;DP=341;FS=7.486;HRun=10;HaplotypeScore=60.2827;InbreedingCoeff=0.4515;MQ=66.34;MQ0=0;MQRankSum=-0.039;QD=8.68;ReadPosRankSum=3.568;VQSLOD=1.5863;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,10:14:29.97:260,30,0	0/0:6,0:6:12.01:0,12,120	0/0:6,2:7:4.50:0,4,75	0/1:12,0:8:10.18:10,0,97	0/0:15,1:16:13.01:0,13,351	1/1:5,19:24:53.97:468,54,0	0/0:12,0:12:27.07:0,27,298	0/1:12,0:12:3.42:3,0,65	0/0:9,0:9:15.03:0,15,158	0/0:24,2:26:2.02:0,2,468	0/0:9,0:9:18.05:0,18,199	0/0:10,0:11:30.03:0,30,310	0/0:19,0:19:45.11:0,45,488	0/1:10,1:11:5.78:6,0,206	0/0:12,0:12:33.06:0,33,342	0/0:16,0:16:39.11:0,39,430	0/1:10,1:11:11.01:11,0,118	1/1:1,12:13:26.97:234,27,0	0/0:16,0:16:37.97:0,38,208	0/0:7,0:7:9.03:0,9,44	0/0:5,0:5:2.96:0,3,19	0/0:11,0:11:27.04:0,27,285	0/0:15,0:15:30.08:0,30,327	0/0:10,0:10:9.01:0,9,91	0/0:12,0:12:30.08:0,30,332	0/0:10,0:10:15.54:0,16,108	0/0:14,0:14:27.27:0,27,174	./.
chr10	99611060	.	CTT	C	2872.89	PASS	AB=0.696;AC=39;AF=0.722;AN=54;BaseQRankSum=3.597;DP=394;FS=5.392;HRun=15;HaplotypeScore=63.9311;InbreedingCoeff=0.8177;MQ=71.84;MQ0=1;MQRankSum=-1.014;QD=10.22;ReadPosRankSum=7.073;VQSLOD=1.8814;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,5:10:14.88:132,15,0	1/1:2,9:11:20.58:184,21,0	0/0:19,0:11:9.07:0,9,139	0/0:14,0:9:5.05:0,5,47	0/0:28,0:29:60.90:0,61,657	1/1:11,4:18:26.80:208,27,0	1/1:2,10:12:20.93:185,21,0	1/1:12,0:19:21.81:94,22,0	1/1:1,11:12:23.97:211,24,0	0/0:13,0:15:26.01:0,26,241	0/0:8,0:8:13.85:0,14,154	1/1:2,11:14:33.20:276,33,0	1/1:7,12:20:29.62:249,30,0	1/1:4,9:13:14.87:132,15,0	1/1:1,10:11:20.94:185,21,0	1/1:7,13:21:26.61:223,27,0	0/0:3,0:16:23.03:0,23,91	0/1:9,6:16:10.67:179,0,11	1/1:13,0:21:22.71:96,23,0	1/1:4,0:9:8.18:35,8,0	1/1:2,1:6:8.45:50,8,0	1/1:5,2:7:5.85:53,6,0	1/1:5,11:16:19.99:184,20,0	1/1:2,10:13:14.96:132,15,0	0/0:11,0:11:27.04:0,27,303	1/1:2,0:7:12.04:56,12,0	1/1:6,0:24:46.53:200,47,0	./.
chr10	99611197	.	G	GAA	5271.57	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=8.089;DP=535;FS=5.186;HRun=8;HaplotypeScore=68.7743;InbreedingCoeff=0.9280;MQ=71.06;MQ0=0;MQRankSum=0.661;QD=32.34;ReadPosRankSum=-1.195;VQSLOD=4.7151;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.15:0,54,599	0/0:8,0:8:24.06:0,24,267	0/1:11,0:11:5.77:6,0,100	0/0:9,0:9:18:0,18,187	0/0:27,0:27:81.21:0,81,894	0/0:24,0:24:72.18:0,72,793	0/0:13,0:13:30.05:0,30,324	1/1:3,26:29:76.72:1102,77,0	0/0:16,0:16:42.09:0,42,459	0/0:27,0:27:72.18:0,72,801	0/0:17,0:17:48.11:0,48,519	0/0:14,0:14:36.08:0,36,401	0/0:19,0:19:54.15:0,54,601	0/0:27,0:27:78.20:0,78,868	0/0:16,0:16:45.10:0,45,492	0/0:25,0:25:69.16:0,69,760	1/1:0,0:12:29.82:103,30,0	0/0:27,0:27:75.13:0,75,811	1/1:3,18:24:66.17:947,66,0	1/1:5,21:26:60.16:925,60,0	1/1:0,13:14:30.10:476,30,0	0/0:25,0:25:66.15:0,66,726	0/0:27,0:28:68.99:0,69,816	0/0:13,0:12:36.09:0,36,400	0/0:19,0:19:51.10:0,51,546	1/1:1,17:19:54.17:815,54,0	1/1:1,5:7:14.70:238,15,0	1/1:1,18:21:44.94:660,45,0
chr10	99613118	.	TATAATAATA	T	1214.61	PASS	AB=0.600;AC=21;AF=0.457;AN=46;BaseQRankSum=2.919;DP=232;FS=7.071;HRun=0;HaplotypeScore=68.8552;InbreedingCoeff=0.5597;MQ=57.37;MQ0=0;MQRankSum=-1.899;QD=10.56;ReadPosRankSum=-0.790;VQSLOD=0.8039;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:10:4.78:0,5,24	0/0:5,0:9:1.24:0,1,17	./.	./.	0/0:7,0:11:15.05:0,15,350	1/1:0,0:3:0.84:3,1,0	0/0:3,1:8:4.50:0,4,22	1/1:25,10:35:30.05:404,30,0	0/0:3,0:3:3.01:0,3,54	0/0:10,0:10:9.03:0,9,344	0/0:8,0:8:12.04:0,12,531	1/1:4,0:8:3.74:8,4,0	1/1:6,0:7:1.25:3,1,0	./.	1/1:6,0:7:1.25:3,1,0	0/1:3,0:9:1.50:2,0,13	0/0:10,0:10:21.07:0,21,870	0/0:4,0:11:18.06:0,18,403	1/1:10,7:17:21.04:358,21,0	1/1:6,4:10:9.03:247,9,0	./.	1/1:2,0:3:1.25:3,1,0	0/0:7,0:8:5.92:0,6,41	0/0:2,0:3:3.01:0,3,58	0/0:3,0:7:9.03:0,9,173	./.	1/1:7,3:10:3.01:82,3,0	1/1:0,6:6:9.03:247,9,0
chr10	99613791	.	G	GT	12599.15	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-11.973;DP=558;FS=1.919;HRun=7;HaplotypeScore=49.2622;InbreedingCoeff=0.9744;MQ=82.42;MQ0=0;MQRankSum=-2.503;QD=28.96;ReadPosRankSum=1.782;VQSLOD=5.4161;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:96.29:1160,96,0	1/1:0,7:7:14.89:143,15,0	0/0:11,1:12:15:0,15,139	0/0:19,0:19:38.53:0,39,328	0/0:29,0:29:69.10:0,69,666	1/1:5,22:27:60.18:725,60,0	1/1:2,12:14:27.08:326,27,0	1/1:10,32:42:93.29:1123,93,0	1/1:1,14:15:42.13:507,42,0	0/0:18,0:18:48.06:0,48,455	0/0:26,0:26:66.08:0,66,630	1/1:5,15:20:42.11:495,42,0	1/1:0,21:21:57.17:688,57,0	1/1:1,14:15:36.11:435,36,0	1/1:4,24:28:75.22:897,75,0	1/1:1,16:17:42.13:507,42,0	1/1:0,23:23:66.20:797,66,0	1/1:2,10:12:30.09:362,30,0	1/1:5,4:9:12.04:145,12,0	1/1:3,17:20:51.16:614,51,0	1/1:1,15:16:42.13:507,42,0	1/1:3,7:10:21.06:254,21,0	1/1:3,20:23:51.16:616,51,0	1/1:2,17:19:45.14:544,45,0	0/0:19,0:19:45.07:0,45,435	1/1:2,24:26:46.23:826,46,0	1/1:1,27:28:69.17:817,69,0	1/1:5,3:8:9.03:109,9,0
chr10	99614194	.	C	CGT	1473.78	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.453;DP=829;FS=0.000;HRun=0;HaplotypeScore=150.7104;InbreedingCoeff=0.9070;MQ=69.68;MQ0=4;MQRankSum=0.618;QD=28.90;ReadPosRankSum=-0.562;VQSLOD=4.6556;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,126,1501	0/0:14,0:14:41.88:0,42,472	0/0:38,0:30:40.51:0,41,387	0/0:47,0:32:35.23:0,35,439	0/0:31,0:31:69.20:0,69,828	0/0:26,0:26:60.18:0,60,726	0/0:35,0:36:72.02:0,72,837	0/0:25,0:27:62.84:0,63,702	0/0:24,0:25:62.98:0,63,708	0/0:19,0:19:36.11:0,36,431	0/0:23,0:26:47.81:0,48,540	0/0:30,0:30:84.24:0,84,1003	0/0:26,0:26:60.19:0,60,733	0/0:34,0:34:72.21:0,72,865	0/0:23,0:25:53.83:0,54,614	0/0:26,0:28:68.85:0,69,774	1/1:9,41:51:65.69:1569,66,0	0/0:26,0:27:66.02:0,66,769	0/0:22,0:25:26.41:0,26,448	0/0:19,0:19:48.14:0,48,575	0/0:38,0:39:95.94:0,96,1103	0/0:24,0:24:60.18:0,60,722	0/0:18,0:19:6.22:0,6,415	0/0:39,0:42:99:0,111,1296	0/0:30,0:31:80.27:0,80,945	0/0:26,0:27:72.06:0,72,857	0/0:27,0:27:66.17:0,66,790	0/0:14,0:14:36.11:0,36,437
chr10	99614663	.	A	AGAG	5673.19	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-5.864;DP=618;FS=3.954;HRun=0;HaplotypeScore=94.5035;InbreedingCoeff=0.9434;MQ=74.04;MQ0=6;MQRankSum=-0.462;QD=25.33;ReadPosRankSum=-0.608;VQSLOD=4.4967;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,11:20:30.10:594,30,0	0/0:8,0:8:18.06:0,18,254	0/0:34,0:22:24.07:0,24,307	0/1:35,0:26:1.78:2,0,157	0/0:27,0:27:63.21:0,63,889	1/1:8,14:22:41.09:890,41,0	0/0:31,0:31:66.22:0,66,930	1/1:16,4:21:15.01:246,15,0	0/0:17,0:17:48.13:0,48,622	0/0:26,0:26:60.19:0,60,814	0/0:14,0:14:33.11:0,33,466	0/0:23,0:23:54.18:0,54,756	0/0:22,0:22:36.46:0,36,476	0/0:16,0:16:33.10:0,33,449	0/0:23,0:22:36.11:0,36,490	0/0:30,0:30:66.18:0,66,887	0/0:18,0:18:30.10:0,30,423	0/0:15,0:15:40:0,40,528	1/1:9,3:12:15.05:257,15,0	1/1:8,16:24:33.11:642,33,0	1/1:13,23:37:54.19:1086,54,0	0/0:23,0:23:51.17:0,51,714	0/0:17,0:17:35.88:0,36,508	0/0:30,0:30:66.14:0,66,871	0/0:20,0:20:39.01:0,39,503	1/1:6,14:21:42.10:782,42,0	1/1:11,11:23:42.14:814,42,0	1/1:3,5:8:18.06:361,18,0
chr10	99614695	.	AGAG	A	1039.36	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.786;DP=593;FS=1.501;HRun=0;HaplotypeScore=102.4614;InbreedingCoeff=0.9830;MQ=63.00;MQ0=8;MQRankSum=-5.932;QD=28.87;ReadPosRankSum=0.451;VQSLOD=3.6762;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,14:19:39.13:569,39,0	0/0:10,0:10:27.09:0,27,512	0/0:33,0:16:32.85:0,33,507	0/0:43,0:25:22.20:0,22,647	0/0:29,0:29:70.08:0,70,1295	1/1:5,12:17:42.13:592,42,0	0/0:31,0:30:78.24:0,78,1519	0/0:14,0:14:24.04:0,24,440	0/0:19,0:18:48.16:0,48,979	0/0:21,0:21:57.17:0,57,1093	0/0:15,0:15:42.14:0,42,832	0/0:25,0:25:63.02:0,63,1205	0/0:19,0:19:46.26:0,46,889	0/0:14,0:14:27.09:0,27,568	0/0:24,0:23:51.11:0,51,1029	0/0:29,0:29:69.22:0,69,1352	0/0:17,0:17:22.61:0,23,668	0/0:13,0:14:22.43:0,22,556	0/0:11,0:10:21.06:0,21,387	0/0:21,0:20:51.13:0,51,944	0/0:31,0:31:60.19:0,60,1225	0/0:22,0:22:66.21:0,66,1306	0/0:15,0:15:39.13:0,39,770	0/0:31,0:29:65.32:0,65,1478	0/0:20,0:20:48.15:0,48,958	0/0:21,0:21:54.18:0,54,1092	0/0:19,0:19:54:0,54,1033	0/0:8,0:8:15.05:0,15,298
chr10	99616962	.	GT	G	904.93	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=7.018;DP=579;FS=5.298;HRun=1;HaplotypeScore=75.9187;InbreedingCoeff=0.7800;MQ=84.75;MQ0=0;MQRankSum=-4.926;QD=19.67;ReadPosRankSum=1.712;VQSLOD=3.9046;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:36.04:0,36,146	0/0:9,0:9:27.04:0,27,331	0/0:20,0:20:34.55:0,35,567	0/0:27,0:27:48.68:0,49,653	0/0:19,0:19:50.50:0,50,666	0/0:32,0:32:71.16:0,71,311	0/0:22,0:22:66.17:0,66,945	0/0:27,0:27:75.39:0,75,920	1/1:0,18:18:45.04:617,45,0	0/0:25,0:25:75.17:0,75,1009	0/0:14,0:14:39.06:0,39,488	0/0:27,0:27:78.19:0,78,1076	0/0:34,0:34:99:0,102,1459	0/0:25,0:25:74.65:0,75,1007	0/0:23,0:23:65.03:0,65,977	0/0:24,0:24:68.63:0,69,1056	0/1:16,0:16:11.05:11,0,30	1/1:1,11:12:23.58:404,24,0	0/0:27,0:27:67.89:0,68,832	0/0:18,0:18:49.37:0,49,644	0/0:21,0:21:55.93:0,56,778	0/0:16,0:16:45.12:0,45,603	0/0:14,0:14:34.93:0,35,516	0/0:10,0:10:11.69:0,12,292	0/0:11,0:11:26.48:0,26,374	0/0:24,0:24:33.86:0,34,843	0/0:30,0:30:66.23:0,66,1245	0/0:13,0:13:33.08:0,33,472
chr10	99616963	.	T	TG	1546.31	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=7.498;DP=576;FS=0.000;HRun=1;HaplotypeScore=74.1338;InbreedingCoeff=0.7554;MQ=84.56;MQ0=0;MQRankSum=-3.297;QD=23.79;ReadPosRankSum=1.165;VQSLOD=3.5396;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:21:42.61:584,43,0	0/0:8,0:8:24.05:0,24,298	0/0:18,0:19:53.58:0,54,573	0/0:28,0:28:67.37:0,67,643	0/0:16,0:18:44.89:0,45,557	1/1:1,30:32:82.07:1079,82,0	0/0:23,0:23:66.18:0,66,850	0/0:26,0:29:75.12:0,75,856	0/0:19,0:19:5.11:0,5,13	0/0:24,0:24:72.19:0,72,903	0/0:14,0:14:39:0,39,462	0/0:27,0:27:75.21:0,75,965	0/0:33,0:33:99:0,99,1323	0/0:26,0:26:75.19:0,75,952	0/0:22,0:23:69.19:0,69,905	0/0:23,0:24:72.20:0,72,958	0/0:1,0:15:38.76:0,39,289	0/1:12,0:12:10.97:11,0,35	0/0:22,0:25:71.97:0,72,774	0/0:18,0:18:51.13:0,51,630	0/0:18,0:20:60.10:0,60,727	0/0:15,0:15:42.03:0,42,545	0/0:12,0:14:42.06:0,42,501	0/0:7,0:10:23.05:0,23,297	0/0:9,0:11:30.06:0,30,366	0/0:24,0:24:33.97:0,34,802	0/0:30,0:31:90.10:0,90,1123	0/0:13,0:13:33.07:0,33,406
chr10	99617112	.	AT	A	949.06	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.206;DP=483;FS=1.427;HRun=9;HaplotypeScore=48.2652;InbreedingCoeff=0.9845;MQ=70.72;MQ0=0;MQRankSum=-0.352;QD=21.09;ReadPosRankSum=3.757;VQSLOD=4.1802;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:66.04:604,66,0	0/0:6,0:6:18.05:0,18,207	0/0:8,0:8:24.05:0,24,259	0/0:8,0:8:18.05:0,18,208	0/0:23,0:22:51.15:0,51,588	1/1:2,18:20:51.02:467,51,0	0/0:11,0:11:30.09:0,30,346	0/0:35,0:35:93.28:0,93,1073	0/0:3,0:10:17.04:0,17,87	0/0:18,0:18:45.12:0,45,511	0/0:12,0:12:27.08:0,27,312	0/0:12,0:12:36.10:0,36,407	0/0:22,0:22:60.10:0,60,659	0/0:18,0:18:45.12:0,45,511	0/0:16,0:16:42.12:0,42,477	0/0:17,0:17:45.13:0,45,519	0/0:19,0:19:57.15:0,57,645	0/0:1,0:22:56.82:0,57,288	0/0:21,0:22:56.86:0,57,608	0/0:24,0:24:57.16:0,57,649	0/0:16,0:16:45.08:0,45,481	0/0:13,0:13:33.10:0,33,381	0/0:18,0:18:48.14:0,48,554	0/0:13,0:13:36.11:0,36,415	0/0:21,0:21:63.17:0,63,713	0/0:14,0:14:39.12:0,39,450	0/0:22,0:22:54.16:0,54,623	0/0:18,0:18:45.13:0,45,519
chr10	99617332	.	A	AG	1229.25	PASS	AB=0.620;AC=14;AF=0.250;AN=56;BaseQRankSum=4.541;DP=340;FS=7.211;HRun=9;HaplotypeScore=54.7696;InbreedingCoeff=0.7751;MQ=81.76;MQ0=0;MQRankSum=-1.066;QD=14.99;ReadPosRankSum=-0.189;VQSLOD=3.2362;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:36.36:0,36,302	0/0:5,0:5:8.99:0,9,78	0/0:26,0:22:37.83:0,38,315	0/0:16,0:15:10.74:0,11,111	0/0:14,0:14:29.97:0,30,257	0/0:8,0:8:23.98:0,24,204	0/0:10,0:10:26.99:0,27,234	0/1:6,9:15:1.37:189,0,1	0/0:11,0:11:26.99:0,27,234	0/0:13,0:13:32.93:0,33,278	0/0:11,0:11:26.99:0,27,234	0/0:12,0:12:29.96:0,30,256	0/0:14,0:15:41.03:0,41,344	0/0:11,0:12:31.94:0,32,255	0/0:9,0:9:26.03:0,26,214	0/0:9,0:9:20.98:0,21,179	1/1:4,12:16:33.09:365,33,0	0/0:20,0:20:56.89:0,57,481	1/1:1,3:4:8.92:71,9,0	1/1:3,2:5:5.95:51,6,0	1/1:7,6:14:26.85:257,27,0	0/0:11,0:11:23.99:0,24,208	0/0:10,0:10:17.97:0,18,150	0/0:14,0:14:41.99:0,42,364	0/0:12,0:12:29.99:0,30,260	0/1:2,3:5:14.02:88,0,14	1/1:1,12:14:6.96:287,7,0	1/1:2,6:8:9.02:100,9,0
chr10	99617526	.	G	GA	1107.11	PASS	AB=0.929;AC=10;AF=0.179;AN=56;BaseQRankSum=-5.216;DP=448;FS=13.911;HRun=10;HaplotypeScore=51.2524;InbreedingCoeff=0.4968;MQ=79.32;MQ0=0;MQRankSum=0.697;QD=9.71;ReadPosRankSum=-0.103;VQSLOD=0.6896;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:56.89:0,57,465	0/0:6,0:6:17.97:0,18,147	0/0:12,0:12:16.48:0,16,110	0/0:15,0:15:8.71:0,9,105	0/0:25,0:25:71.29:0,71,575	0/1:23,1:24:3.02:3,0,334	0/0:10,0:11:32:0,32,252	0/0:33,0:34:76.86:0,77,612	1/1:2,13:15:44.94:456,45,0	0/0:15,0:15:12.61:0,13,266	0/1:11,2:13:27.75:28,0,210	0/0:13,0:13:29.92:0,30,246	0/0:13,0:13:12.66:0,13,248	0/0:11,0:11:29.95:0,30,243	0/0:16,0:16:38.91:0,39,317	0/1:14,2:16:22.03:22,0,254	1/1:4,18:23:7.70:477,8,0	1/1:3,11:14:5.43:263,5,0	0/0:17,0:17:35.95:0,36,295	0/0:16,0:16:38.93:0,39,320	0/1:9,0:9:0.11:0,0,148	0/0:13,0:14:31.95:0,32,248	0/0:12,0:12:23.94:0,24,196	0/0:13,0:13:35.96:0,36,296	0/0:14,0:14:35.92:0,36,293	0/0:17,0:17:29.92:0,30,246	0/0:24,1:25:27.92:0,28,436	0/0:12,0:12:14.92:0,15,123
chr10	99618341	.	TCAGAGAGCA	T	10121.95	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.308;DP=625;FS=14.452;HRun=0;HaplotypeScore=177.9704;InbreedingCoeff=0.9881;MQ=88.09;MQ0=0;MQRankSum=-14.001;QD=68.39;ReadPosRankSum=0.388;VQSLOD=3.8608;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.31:0,90,4385	0/0:8,0:8:21.07:0,21,1030	0/0:25,0:25:66.23:0,66,2824	0/0:27,0:26:72.07:0,72,2903	0/0:23,0:23:66.23:0,66,3125	0/0:31,0:31:87.28:0,87,4040	0/0:21,0:21:60.19:0,60,2734	1/1:3,27:30:81.28:2319,81,0	0/0:24,0:24:72.23:0,72,3261	0/0:34,0:34:96.33:0,96,4563	0/0:9,0:9:27.09:0,27,1308	0/0:20,0:20:57.20:0,57,2796	0/0:27,0:27:75.26:0,75,3633	0/0:30,0:30:90.31:0,90,4055	0/0:23,0:23:69.24:0,69,3332	0/0:24,0:24:72.25:0,72,3456	0/0:26,0:26:78.27:0,78,3755	0/0:29,0:29:87.30:0,87,3930	1/1:4,18:22:54.14:1461,54,0	1/1:0,15:15:39.13:1209,39,0	1/1:3,17:20:30.02:930,30,0	0/0:22,0:22:63.22:0,63,3077	0/0:13,0:13:39.12:0,39,1727	0/0:22,0:22:66.23:0,66,3008	0/0:9,0:9:27.09:0,27,1296	1/1:4,19:23:57.20:1691,57,0	1/1:2,29:31:72.25:2233,72,0	1/1:0,7:7:9.03:279,9,0
chr10	99620019	.	G	GCT	10234.71	PASS	AB=0.529;AC=23;AF=0.411;AN=56;BaseQRankSum=-14.245;DP=504;FS=1.127;HRun=0;HaplotypeScore=59.2562;InbreedingCoeff=0.8978;MQ=96.15;MQ0=0;MQRankSum=-3.954;QD=41.95;ReadPosRankSum=-0.453;VQSLOD=6.2290;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:60.21:1051,60,0	0/0:8,0:8:24.08:0,24,325	0/0:23,0:23:60.18:0,60,777	0/0:27,0:26:47.74:0,48,614	0/0:15,0:15:39.13:0,39,527	1/1:0,13:14:30.10:526,30,0	0/0:27,0:27:75.21:0,75,993	1/1:3,27:31:81.22:1316,81,0	1/1:0,8:8:14.81:263,15,0	0/0:12,0:12:33.10:0,33,433	0/0:11,0:11:27.06:0,27,344	0/0:17,0:17:45.13:0,45,591	0/0:18,0:18:48.14:0,48,630	0/0:11,0:11:33.11:0,33,446	0/0:22,0:22:63.19:0,63,834	0/0:6,0:6:18.06:0,18,243	1/1:2,36:39:99:1735,99,0	1/1:1,20:22:50.95:894,51,0	1/1:4,21:25:72.18:1152,72,0	1/1:1,16:18:39.09:650,39,0	1/1:2,20:22:60.21:1047,60,0	0/0:6,0:6:15.05:0,15,203	0/0:10,0:10:21.07:0,21,284	0/0:26,0:26:69.23:0,69,933	0/0:21,0:21:54.18:0,54,726	0/1:1,8:9:13.13:394,0,13	1/1:2,25:28:66.22:1156,66,0	1/1:0,4:4:3.01:53,3,0
chr10	99620332	.	A	AT	2962.01	PASS	AB=0.605;AC=13;AF=0.232;AN=56;BaseQRankSum=-11.083;DP=527;FS=7.515;HRun=10;HaplotypeScore=50.3418;InbreedingCoeff=0.9077;MQ=71.25;MQ0=0;MQRankSum=0.142;QD=22.27;ReadPosRankSum=-2.134;VQSLOD=3.6942;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:89.85:0,90,731	0/0:14,0:14:35.95:0,36,295	0/0:9,0:7:11.48:0,11,83	0/0:13,0:13:16.17:0,16,127	0/0:28,0:29:76.84:0,77,604	0/0:22,0:22:62.89:0,63,511	0/0:10,0:10:29.92:0,30,240	1/1:7,20:27:60.15:639,60,0	0/0:19,0:19:56.91:0,57,465	0/0:29,0:29:71.87:0,72,587	0/0:18,0:18:44.90:0,45,364	0/0:17,0:17:41.93:0,42,345	0/0:12,0:12:32.96:0,33,271	0/0:15,0:15:35.94:0,36,296	0/0:25,0:25:74.91:0,75,616	0/0:13,0:13:35.96:0,36,296	0/0:19,0:19:50.87:0,51,408	0/0:14,0:14:18.54:0,19,289	1/1:0,9:9:27.04:276,27,0	1/1:0,24:24:69.06:698,69,0	1/1:5,18:23:51.13:544,51,0	0/0:24,0:24:56.89:0,57,462	0/0:17,0:19:52.02:0,52,406	0/0:19,0:21:57.96:0,58,449	0/0:17,0:18:38.21:0,38,316	0/1:8,15:23:1.19:391,0,1	1/1:6,10:16:4.61:279,5,0	1/1:0,10:10:30.08:320,30,0
chr10	99621636	.	AGGTGTGGCCTTGTCAGAGTG	A	625.32	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.510;DP=735;FS=3.466;HRun=0;HaplotypeScore=333.9977;InbreedingCoeff=0.7884;MQ=55.56;MQ0=15;MQRankSum=-4.421;QD=11.58;ReadPosRankSum=-0.928;VQSLOD=1.2704;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,21:44:18.06:618,18,0	0/0:11,0:11:24.08:0,24,2056	0/0:49,0:18:9.92:0,10,152	0/0:38,0:17:3.01:0,3,47	0/0:25,0:25:51.18:0,51,3093	1/1:8,1:9:3.01:114,3,0	0/0:30,0:30:45.15:0,45,2290	0/0:32,0:32:30.10:0,30,1157	0/0:24,0:24:51.17:0,51,3739	0/0:13,0:13:21.07:0,21,1585	0/0:12,0:12:24.08:0,24,1630	0/0:30,0:30:69.24:0,69,4804	0/0:25,0:25:51.17:0,51,4476	0/0:22,0:22:42.14:0,42,2705	0/0:22,0:22:39.13:0,39,2863	0/0:22,0:22:45.14:0,45,3051	0/0:41,0:41:96.33:0,96,6287	0/0:27,0:27:60.21:0,60,4760	0/0:30,0:30:30.08:0,30,2030	0/0:22,0:22:51.18:0,51,3727	0/0:63,0:62:99:0,119,7338	0/0:11,0:11:21.06:0,21,1456	0/0:13,0:13:28.34:0,28,1926	0/0:29,0:29:63.20:0,63,4573	0/0:22,0:22:42.14:0,42,2691	0/0:31,0:31:54.19:0,54,3886	0/0:22,0:21:45.15:0,45,2838	0/0:15,0:15:24.06:0,24,1241
chr10	99622398	.	GA	G	2612.14	PASS	AB=0.819;AC=15;AF=0.268;AN=56;BaseQRankSum=9.600;DP=548;FS=14.287;HRun=11;HaplotypeScore=59.4119;InbreedingCoeff=0.5916;MQ=74.55;MQ0=1;MQRankSum=2.809;QD=12.68;ReadPosRankSum=-0.673;VQSLOD=1.5685;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:27:47.32:0,47,674	0/1:2,1:3:18.63:19,0,26	0/0:11,1:12:23.99:0,24,222	0/0:13,0:11:7.76:0,8,89	0/0:23,0:23:50.40:0,50,591	0/0:30,1:31:39.53:0,40,776	0/0:13,0:13:27.07:0,27,288	1/1:12,27:39:44.68:563,45,0	0/0:11,0:11:24.04:0,24,246	0/0:28,1:29:44.51:0,45,668	0/0:24,0:24:57.13:0,57,599	0/0:15,0:15:39.09:0,39,409	0/0:15,0:15:42.09:0,42,434	0/1:11,2:13:13.20:13,0,283	0/0:21,0:21:54.07:0,54,548	0/0:9,0:9:24:0,24,235	0/0:24,0:24:63.14:0,63,663	0/0:21,0:21:54.12:0,54,565	1/1:2,15:17:15.91:332,16,0	1/1:6,29:35:77.86:639,78,0	1/1:1,9:10:20.98:172,21,0	0/0:20,0:21:29.13:0,29,463	0/0:19,0:19:42.11:0,42,447	0/0:14,0:14:36.07:0,36,375	0/1:22,3:25:10.76:11,0,513	0/1:6,15:21:0.55:336,0,1	1/1:3,32:36:85.72:695,86,0	0/1:7,0:7:18.49:18,0,26
chr10	99623081	.	ATGTG	A	676.59	PASS	AB=0.900;AC=17;AF=0.370;AN=46;BaseQRankSum=2.299;DP=349;FS=1.219;HRun=0;HaplotypeScore=58.8851;InbreedingCoeff=0.4999;MQ=74.49;MQ0=11;MQRankSum=0.218;QD=5.20;ReadPosRankSum=2.557;VQSLOD=1.5873;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,3:27:53.42:81,0,53	0/0:3,0:3:3.01:0,3,44	./.	./.	0/0:6,0:7:11.56:0,12,141	1/1:8,1:9:3.01:47,3,0	0/0:12,0:12:9.03:0,9,212	0/0:36,0:35:2.99:0,3,24	0/0:8,0:9:3.01:0,3,52	0/0:9,0:8:3.01:0,3,70	0/0:7,0:7:9.03:0,9,162	./.	./.	0/0:5,0:6:8.77:0,9,128	0/0:8,0:8:3.01:0,3,46	0/0:5,0:5:3:0,3,71	1/1:14,8:22:15.05:233,15,0	0/0:15,0:19:12.04:0,12,240	1/1:17,2:18:6.49:94,6,0	1/1:6,1:7:3.01:47,3,0	1/1:21,3:19:6.02:93,6,0	./.	0/0:5,0:6:11.51:0,12,113	0/0:21,0:21:29.81:0,30,568	0/0:9,0:10:8.77:0,9,111	1/1:7,1:7:3.01:47,3,0	1/1:4,2:6:6.02:93,6,0	1/1:6,2:8:6.02:93,6,0
chr10	99624202	.	AACAC	A	1641.63	PASS	AB=0.722;AC=7;AF=0.125;AN=56;BaseQRankSum=3.531;DP=651;FS=10.501;HRun=0;HaplotypeScore=108.7411;InbreedingCoeff=0.2571;MQ=66.21;MQ0=8;MQRankSum=1.359;QD=12.83;ReadPosRankSum=1.031;VQSLOD=2.5987;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,19:34:0.56:625,0,1	0/0:13,0:15:13.58:0,14,437	0/0:30,0:15:3.01:0,3,72	0/0:20,0:17:3.01:0,3,51	0/0:26,0:25:51.14:0,51,1117	0/1:11,18:30:13.90:535,0,14	0/0:15,0:17:26.81:0,27,528	0/0:25,0:31:30.10:0,30,611	1/1:6,12:19:24.08:363,24,0	0/0:29,0:31:53.59:0,54,1048	0/1:13,1:17:12.31:12,0,589	0/0:22,0:22:45.12:0,45,964	0/0:20,0:23:41.85:0,42,856	0/0:28,1:30:12:0,12,1112	0/0:21,0:21:32.69:0,33,668	0/0:20,0:21:44.89:0,45,1009	0/0:18,0:18:36.12:0,36,837	0/1:5,7:13:16.38:219,0,16	0/0:9,0:12:12.51:0,13,194	0/0:20,0:29:30.05:0,30,443	0/0:11,0:20:18.06:0,18,349	0/0:35,0:36:50.91:0,51,1068	0/0:22,0:26:38.57:0,39,693	0/0:26,1:32:65.28:0,65,1273	0/0:19,0:19:32.99:0,33,655	0/0:11,0:19:33.09:0,33,573	0/0:10,0:23:30.56:0,31,542	0/1:5,1:14:20.80:21,0,375
chr10	99626068	.	C	CA	872.47	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=-4.038;DP=495;FS=0.718;HRun=6;HaplotypeScore=48.2412;InbreedingCoeff=0.6545;MQ=73.46;MQ0=0;MQRankSum=-0.705;QD=16.78;ReadPosRankSum=0.048;VQSLOD=2.9415;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:2.55:3,0,245	0/0:3,0:3:9.02:0,9,92	0/1:10,0:10:19.49:19,0,105	0/0:8,0:8:15.01:0,15,141	0/0:25,0:25:69.14:0,69,697	0/0:25,0:25:69.16:0,69,704	0/0:14,0:14:30.07:0,30,306	0/0:30,0:30:87.19:0,87,887	1/1:1,12:13:33.11:415,33,0	0/0:23,0:22:63.13:0,63,638	0/0:34,0:34:90.18:0,90,910	0/0:12,0:12:33.08:0,33,337	0/0:16,0:16:48.11:0,48,489	0/0:23,0:23:66.15:0,66,673	0/0:12,0:12:30.06:0,30,306	0/0:16,0:16:45.10:0,45,459	0/0:15,0:15:42.10:0,42,428	1/1:1,16:17:45.14:566,45,0	0/0:22,0:22:60.13:0,60,612	0/0:35,0:35:93.19:0,93,942	0/0:17,0:17:45.10:0,45,459	0/0:8,0:8:21.05:0,21,214	0/0:11,0:11:27.06:0,27,275	0/0:10,0:10:24.03:0,24,237	0/0:20,0:20:57.13:0,57,582	0/0:29,0:29:81.18:0,81,826	0/0:27,0:26:72.16:0,72,734	0/0:8,0:8:24.05:0,24,245
chr10	99627958	.	CT	C	1847.56	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.343;DP=713;FS=1.178;HRun=1;HaplotypeScore=85.9285;InbreedingCoeff=0.9937;MQ=77.77;MQ0=0;MQRankSum=-4.011;QD=36.23;ReadPosRankSum=-0.230;VQSLOD=3.5757;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:84.28:1173,84,0	0/0:9,0:9:24.08:0,24,384	0/0:30,0:30:77.84:0,78,1178	0/0:21,0:21:60.16:0,60,866	0/0:14,0:14:42.11:0,42,624	1/1:0,19:19:57.19:797,57,0	0/0:29,0:29:87.28:0,87,1368	0/0:34,0:34:99:0,100,1541	0/0:31,0:31:93.30:0,93,1462	0/0:25,0:25:75.25:0,75,1179	0/0:9,0:9:24.07:0,24,362	0/0:25,0:25:75.26:0,75,1195	0/0:28,0:28:81.28:0,81,1294	0/0:43,0:43:99:0,126,2011	0/0:32,0:32:96.33:0,96,1532	0/0:29,0:29:87.28:0,87,1364	0/0:36,0:36:99:0,108,1727	0/0:39,0:39:99:0,117,1811	0/0:29,0:29:87.29:0,87,1366	0/0:15,0:15:42.14:0,42,670	0/0:45,0:45:99:0,135,2158	0/0:14,0:14:42.12:0,42,626	0/0:16,0:16:42.14:0,42,669	0/0:45,0:45:99:0,135,2100	0/0:20,0:20:60.20:0,60,959	0/0:18,0:18:54.17:0,54,822	0/0:20,0:20:57.19:0,57,909	0/0:6,0:6:18.06:0,18,288
chr10	99629365	.	AAC	A	1039.76	PASS	AB=0.908;AC=15;AF=0.278;AN=54;BaseQRankSum=3.206;DP=700;FS=16.453;HRun=0;HaplotypeScore=99.5803;InbreedingCoeff=-0.0402;MQ=70.19;MQ0=8;MQRankSum=0.798;QD=3.06;ReadPosRankSum=1.907;VQSLOD=0.5753;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,20:37:27.66:495,28,0	0/1:3,1:16:6.67:7,0,177	0/0:27,0:20:6.42:0,6,62	./.	0/1:22,5:26:55.83:56,0,460	1/1:10,15:26:35.77:364,36,0	0/0:27,3:31:0.34:0,0,566	0/0:22,0:23:27.89:0,28,259	0/0:11,0:27:36:0,36,327	0/1:24,6:30:60.09:60,0,506	0/1:14,3:17:31.31:31,0,344	0/1:26,0:26:3.06:3,0,559	0/1:18,2:20:23.71:24,0,242	0/1:19,2:21:31.39:31,0,350	0/1:28,2:30:10.13:10,0,689	0/1:17,3:20:56.60:57,0,448	0/0:36,0:35:6.06:0,6,32	0/0:13,0:28:31.22:0,31,274	0/0:20,0:20:13.81:0,14,122	0/0:11,0:15:16.81:0,17,136	0/0:16,0:35:32.98:0,33,285	0/1:29,1:31:10.46:10,0,643	0/0:17,3:20:6.93:0,7,445	0/1:37,2:39:49.06:49,0,859	0/0:14,0:14:24.08:0,24,365	0/0:10,0:22:40.61:0,41,345	0/0:5,0:17:18.87:0,19,129	0/0:6,0:10:12:0,12,105
chr10	99630759	.	AT	A	275.47	PASS	AB=0.897;AC=3;AF=0.054;AN=56;BaseQRankSum=4.173;DP=560;FS=3.045;HRun=10;HaplotypeScore=61.4750;InbreedingCoeff=0.5388;MQ=67.53;MQ0=21;MQRankSum=2.397;QD=5.62;ReadPosRankSum=1.671;VQSLOD=1.0614;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:42:99:0,120,1287	0/0:7,0:7:18.01:0,18,186	0/0:11,0:11:5.96:0,6,52	0/0:9,0:8:8.63:0,9,81	0/0:21,0:21:48.09:0,48,517	0/0:19,0:19:53.70:0,54,514	0/0:27,0:26:65.87:0,66,673	0/0:27,0:26:54.07:0,54,571	0/0:14,0:13:33.09:0,33,365	0/0:25,0:23:63.17:0,63,697	0/0:17,0:17:42.10:0,42,457	0/0:21,0:21:53.63:0,54,572	0/0:21,1:21:25.27:0,25,495	0/0:21,0:21:51.06:0,51,538	0/0:19,0:19:45.11:0,45,491	0/0:16,0:16:42.08:0,42,452	1/1:5,18:21:41.99:365,42,0	0/0:16,0:17:41.74:0,42,433	0/0:28,0:27:63.15:0,63,687	0/1:22,3:26:15.23:15,0,489	0/0:19,0:18:45.11:0,45,488	0/0:20,0:20:48.12:0,48,524	0/0:21,0:21:54.15:0,54,597	0/0:26,0:24:48.13:0,48,528	0/0:15,1:13:7.01:0,7,295	0/0:21,1:21:19.06:0,19,432	0/0:15,0:14:33.09:0,33,364	0/0:5,0:5:15.04:0,15,166
chr10	99632459	.	AG	A	1290.25	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.833;DP=745;FS=2.618;HRun=6;HaplotypeScore=72.5095;InbreedingCoeff=0.9792;MQ=82.94;MQ0=0;MQRankSum=-2.173;QD=22.64;ReadPosRankSum=1.996;VQSLOD=3.2813;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,138,1739	0/0:9,0:9:18.06:0,18,236	0/0:23,0:23:53.91:0,54,652	0/0:24,0:24:57.15:0,57,715	0/0:16,0:16:45.15:0,45,590	0/0:24,0:24:63.17:0,63,797	0/0:34,0:34:90.26:0,90,1141	0/0:35,0:35:93.24:0,93,1168	1/1:3,26:29:26.69:638,27,0	0/0:27,0:27:66.19:0,66,829	0/0:10,0:10:27.07:0,27,328	0/0:29,0:29:75.23:0,75,971	0/0:29,0:29:87.20:0,87,1056	0/0:28,0:28:81.26:0,81,1051	0/0:24,0:24:69.22:0,69,897	0/0:29,0:29:81.23:0,81,1021	0/0:27,0:27:72.20:0,72,916	1/1:1,27:28:72.18:774,72,0	0/0:21,0:21:57.16:0,57,720	0/0:27,0:27:78.25:0,78,1025	0/0:78,0:78:99:0,226,2927	0/0:21,0:21:60.18:0,60,769	0/0:12,0:12:36.11:0,36,460	0/0:41,0:41:99:0,117,1520	0/0:16,0:16:45.15:0,45,590	0/0:28,0:28:69.22:0,69,905	0/0:22,0:22:63.17:0,63,793	0/0:4,0:4:12.04:0,12,158
chr10	99633562	.	T	TA	4788.83	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-14.116;DP=671;FS=1.218;HRun=3;HaplotypeScore=59.7457;InbreedingCoeff=0.9952;MQ=90.44;MQ0=0;MQRankSum=-2.913;QD=37.12;ReadPosRankSum=1.642;VQSLOD=5.4025;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,39:40:99:1386,99,0	0/0:6,0:6:15.05:0,15,180	0/0:30,0:30:59.53:0,60,677	0/0:21,0:21:47.88:0,48,552	0/0:24,0:24:60.17:0,60,709	1/1:0,20:20:57.19:798,57,0	0/0:30,0:30:87.23:0,87,1009	0/0:30,0:30:87.15:0,87,997	1/1:0,20:20:57.19:798,57,0	0/0:25,0:25:72.22:0,72,862	0/0:24,0:24:66.16:0,66,759	0/0:22,0:22:63.18:0,63,743	0/0:30,0:30:90.28:0,90,1080	0/0:22,0:22:66.20:0,66,792	0/0:33,0:33:93.27:0,93,1105	0/0:26,0:26:66.20:0,66,792	1/1:1,32:33:90.30:1260,90,0	1/1:2,14:16:39.13:546,39,0	0/0:18,0:18:51.16:0,51,612	0/0:30,0:30:84.26:0,84,1007	0/0:36,0:36:99:0,102,1224	0/0:21,0:21:54.14:0,54,625	0/0:11,0:11:30.09:0,30,360	0/0:30,0:30:90.28:0,90,1080	0/0:13,0:13:36.11:0,36,432	0/0:27,0:27:69.20:0,69,818	0/0:26,0:26:78.19:0,78,899	0/0:7,0:7:21.06:0,21,252
chr10	99634651	.	T	TAC	1201.03	PASS	AB=0.793;AC=12;AF=0.240;AN=50;BaseQRankSum=-2.591;DP=538;FS=10.317;HRun=0;HaplotypeScore=91.8178;InbreedingCoeff=0.4131;MQ=63.08;MQ0=10;MQRankSum=-0.763;QD=7.06;ReadPosRankSum=-1.283;VQSLOD=1.8146;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:7:21.05:0,21,228	1/1:22,0:13:2.80:13,3,0	./.	0/0:31,0:31:8.49:0,8,509	0/0:9,0:19:5.02:0,5,20	0/0:21,0:22:20.42:0,20,265	0/1:24,0:20:21.63:93,0,22	0/0:3,0:8:8.48:0,8,41	0/0:22,0:24:31.14:0,31,278	0/0:23,0:23:9.94:0,10,281	0/0:13,0:14:13.57:0,14,129	0/0:26,0:26:45.12:0,45,505	0/0:13,0:14:22.68:0,23,257	0/0:24,0:26:47.51:0,48,475	0/0:25,0:24:39.51:0,40,340	./.	0/0:3,0:5:5.68:0,6,28	1/1:13,6:19:21.07:312,21,0	0/1:13,9:23:55.59:79,0,56	1/1:13,15:25:18.06:268,18,0	0/0:21,0:21:21.04:0,21,226	0/0:19,0:19:21.03:0,21,219	0/0:28,0:29:46.80:0,47,441	0/0:16,0:16:27.06:0,27,294	0/1:15,4:18:40.26:242,0,40	0/1:12,13:25:96.99:273,0,97	1/1:8,0:7:5.73:75,6,0
chr10	99634681	.	CACAGAT	C	238.28	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=4.157;DP=598;FS=0.738;HRun=0;HaplotypeScore=149.4784;InbreedingCoeff=0.0973;MQ=48.90;MQ0=32;MQRankSum=-2.626;QD=2.21;ReadPosRankSum=1.296;VQSLOD=2.3623;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:18:0.53:1,1,0	0/1:11,0:11:14.65:15,0,629	0/0:27,0:2:2.80:0,3,13	0/0:24,0:3:2.98:0,3,21	0/0:27,0:27:79.82:0,80,1484	0/1:18,0:18:11.33:11,0,32	0/0:26,0:26:51.05:0,51,803	0/0:26,0:15:21.88:0,22,241	1/1:7,0:7:3.85:23,4,0	0/1:22,0:21:99:284,0,373	0/0:16,10:25:31.56:0,32,415	0/0:22,0:22:14.24:0,14,825	0/0:32,0:32:84.20:0,84,1581	0/0:21,0:20:23.27:0,23,1151	0/0:28,0:28:7.34:0,7,1298	0/0:24,0:23:57.19:0,57,1044	0/0:9,0:7:5.05:0,5,48	0/1:8,0:8:19.03:19,0,24	0/0:20,0:17:30.61:0,31,439	0/0:29,0:27:19.74:0,20,248	0/0:28,0:23:6.01:0,6,58	0/0:13,0:12:33.11:0,33,672	0/0:22,0:21:47.71:0,48,897	0/0:31,0:29:1.38:0,1,1309	0/0:20,0:20:60.19:0,60,1282	0/1:22,0:20:0.25:0,0,582	0/0:28,0:27:29.61:0,30,446	0/0:7,0:6:6.49:0,6,91
chr10	99634695	.	T	TG	42.60	PASS	AB=0.923;AC=4;AF=0.071;AN=56;BaseQRankSum=6.018;DP=638;FS=6.574;HRun=0;HaplotypeScore=154.6223;InbreedingCoeff=0.2268;MQ=47.50;MQ0=28;MQRankSum=-5.418;QD=0.64;ReadPosRankSum=-3.056;VQSLOD=1.3518;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,4:23:3.34:32,3,0	0/0:12,0:12:32.92:0,33,411	0/0:24,0:1:3.01:0,3,32	0/0:22,0:2:6.02:0,6,74	0/0:30,0:30:84.26:0,84,1155	0/1:30,0:30:30.61:31,0,122	0/0:24,0:24:42.60:0,43,567	0/0:36,0:28:81.27:0,81,1127	0/0:15,0:15:5.11:0,5,114	0/0:22,0:20:59.34:0,59,546	0/0:25,0:24:27.17:0,27,352	0/0:19,0:19:42.14:0,42,587	0/0:27,0:27:66.22:0,66,912	0/0:21,0:20:51.17:0,51,713	0/0:27,0:27:63.21:0,63,879	0/0:26,0:25:60.14:0,60,749	0/0:14,0:14:6.12:0,6,100	0/1:9,2:11:82.12:82,0,216	0/0:19,0:17:51.16:0,51,687	0/0:31,0:29:25.74:0,26,337	0/0:24,0:20:23.97:0,24,313	0/0:18,0:16:36.12:0,36,510	0/0:27,0:26:54.06:0,54,709	0/0:29,0:27:63.21:0,63,881	0/0:21,0:21:57.19:0,57,797	0/0:17,0:16:43.28:0,43,551	0/0:28,0:27:54.15:0,54,712	0/0:11,0:10:15.05:0,15,209
chr10	99634734	.	TG	T	1025.87	PASS	AB=0.779;AC=11;AF=0.212;AN=52;BaseQRankSum=11.922;DP=639;FS=3.137;HRun=2;HaplotypeScore=182.9404;InbreedingCoeff=0.2480;MQ=50.25;MQ0=14;MQRankSum=-8.974;QD=5.52;ReadPosRankSum=-2.449;VQSLOD=-0.2459;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:10,18:26:27.53:86,0,28	0/0:17,0:17:42.12:0,42,571	./.	./.	0/0:25,0:25:69.23:0,69,1021	1/1:9,20:29:48.44:452,48,0	0/0:24,0:24:33.49:0,33,459	0/0:46,0:40:99:0,116,1612	1/1:6,13:19:35.77:294,36,0	0/0:25,0:23:69.23:0,69,1022	0/0:22,0:22:30.56:0,31,431	0/0:25,1:26:30.23:0,30,855	0/0:27,0:27:62.95:0,63,886	0/0:19,0:19:45.10:0,45,662	0/0:27,0:27:57.17:0,57,765	0/1:23,6:29:18.56:19,0,910	0/1:5,8:12:12.13:78,0,12	0/1:5,3:8:4.91:161,0,5	0/1:12,1:13:25.05:25,0,285	0/0:23,6:29:41.61:0,42,629	0/0:14,0:14:24.08:0,24,358	0/0:23,0:22:50.54:0,51,644	0/0:29,0:29:69.01:0,69,971	0/0:23,1:23:54.13:0,54,785	0/0:34,0:34:99:0,102,1485	0/1:18,3:21:56.18:56,0,701	0/1:22,4:25:11.32:11,0,616	0/0:9,1:9:27.09:0,27,404
chr10	99634736	.	G	GATA	797.33	PASS	AB=1.000;AC=7;AF=0.135;AN=52;BaseQRankSum=10.621;DP=644;FS=17.297;HRun=0;HaplotypeScore=204.6668;InbreedingCoeff=0.4497;MQ=50.56;MQ0=14;MQRankSum=-10.026;QD=8.05;ReadPosRankSum=-3.862;VQSLOD=1.3405;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:27:32.68:135,0,33	0/0:17,0:17:39.11:0,39,585	./.	./.	0/0:24,0:24:63.22:0,63,1050	1/1:24,6:30:5.11:523,5,0	0/0:25,0:25:35.33:0,35,544	0/0:45,0:39:99:0,102,1600	1/1:19,0:19:24.34:166,24,0	0/0:27,0:25:69.22:0,69,1105	0/0:22,0:22:30.02:0,30,497	0/0:24,0:24:62.87:0,63,947	0/0:28,0:28:63.03:0,63,989	0/0:19,0:19:42.14:0,42,699	0/0:27,0:27:48.15:0,48,757	0/0:29,0:29:72.22:0,72,1166	0/1:14,0:12:24.18:33,0,24	0/1:7,0:7:37.18:73,0,37	0/0:10,0:10:27.04:0,27,418	0/0:30,0:30:56.37:0,56,856	0/0:15,0:15:31.51:0,32,437	0/0:23,0:22:47.66:0,48,720	0/0:29,0:29:66:0,66,1036	0/0:25,0:24:50.90:0,51,792	0/0:35,0:35:99:0,105,1719	0/0:23,0:23:56.88:0,57,867	0/0:26,0:25:58.43:0,58,887	0/0:10,0:9:27.09:0,27,450
chr10	99634739	.	AGATGG	A	601.12	PASS	AB=0.919;AC=6;AF=0.115;AN=52;BaseQRankSum=10.580;DP=647;FS=14.052;HRun=0;HaplotypeScore=222.3516;InbreedingCoeff=0.3369;MQ=50.83;MQ0=14;MQRankSum=-10.506;QD=6.07;ReadPosRankSum=-4.355;VQSLOD=0.4519;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:27:99:117,0,125	0/0:18,0:18:42.06:0,42,591	./.	./.	0/0:24,0:24:69.24:0,69,1935	0/1:29,0:30:1.44:122,0,1	0/0:25,0:25:36.58:0,37,721	0/0:45,0:38:99:0,114,2394	1/1:14,5:19:9.48:330,9,0	0/0:29,0:27:81.26:0,81,1975	0/0:20,0:20:27.55:0,28,792	0/0:23,0:23:62.78:0,63,926	0/0:29,0:29:63.10:0,63,947	0/0:19,0:19:42.06:0,42,762	0/0:24,0:24:48:0,48,631	0/0:27,0:27:71.04:0,71,1942	0/1:15,0:13:23.51:52,0,24	0/1:5,0:6:62:105,0,62	0/0:10,0:10:30.10:0,30,801	0/0:29,0:29:57.79:0,58,1626	0/0:15,0:15:28.03:0,28,729	0/0:23,0:22:50.73:0,51,577	0/0:28,0:28:66.10:0,66,1037	0/0:25,0:24:51.50:0,51,844	0/0:39,0:39:99:0,117,3310	0/0:25,0:25:72.16:0,72,1732	0/0:29,0:28:65.91:0,66,1767	0/0:10,0:9:27.09:0,27,899
chr10	99634742	.	TG	T	1102.98	PASS	AB=0.777;AC=7;AF=0.135;AN=52;BaseQRankSum=11.150;DP=648;FS=23.252;HRun=2;HaplotypeScore=182.7731;InbreedingCoeff=0.5969;MQ=50.99;MQ0=14;MQRankSum=-10.682;QD=11.03;ReadPosRankSum=-3.215;VQSLOD=-0.2500;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:22,9:29:51.42:84,0,51	0/0:17,0:17:35.47:0,35,306	./.	./.	0/0:25,0:25:72.24:0,72,1061	1/1:7,24:31:66.44:697,66,0	0/0:24,0:24:34.51:0,35,389	0/0:44,0:37:99:0,108,1484	1/1:15,3:18:33.75:220,34,0	0/0:27,1:26:77.23:0,77,1083	0/0:18,0:18:27.05:0,27,370	0/0:23,0:23:54.54:0,55,493	0/0:28,0:28:45.79:0,46,403	0/0:19,0:19:40.03:0,40,474	0/0:24,0:24:42.50:0,42,322	0/0:28,0:28:71.18:0,71,963	0/1:8,6:13:1.15:128,0,1	0/1:5,1:6:27.78:115,0,28	0/0:13,0:13:39.13:0,39,581	0/0:29,0:29:55.66:0,56,812	0/0:15,0:15:31.57:0,32,386	0/0:26,0:25:49.71:0,50,279	0/0:28,0:28:57.79:0,58,529	0/0:24,0:23:42.01:0,42,456	0/0:39,0:39:99:0,117,1749	0/0:25,0:25:68.34:0,68,934	0/0:30,0:29:68.80:0,69,973	0/0:9,0:9:27.09:0,27,404
chr10	99634743	.	GGATA	G	3937.72	PASS	AB=0.943;AC=26;AF=0.500;AN=52;BaseQRankSum=8.866;DP=644;FS=0.948;HRun=0;HaplotypeScore=197.0446;InbreedingCoeff=0.3945;MQ=51.14;MQ0=14;MQRankSum=1.876;QD=10.76;ReadPosRankSum=0.772;VQSLOD=3.2886;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:27:10.77:11,0,31	1/1:5,12:17:24.08:364,24,0	./.	./.	0/0:25,0:25:48.16:0,48,1076	0/0:31,0:31:30.57:0,31,265	0/1:17,6:23:7.51:85,0,8	0/0:44,0:37:17.32:0,17,111	0/1:16,0:16:25.30:25,0,29	0/1:26,2:26:36.43:36,0,1029	0/1:17,1:18:19.25:19,0,528	1/1:9,14:23:36.09:536,36,0	1/1:9,18:27:29.93:468,30,0	1/1:11,8:19:11.91:187,12,0	1/1:6,18:24:35.91:535,36,0	0/1:25,2:27:42.48:42,0,988	0/1:13,0:12:0.81:1,0,1	1/1:6,0:6:2.03:6,2,0	0/0:14,0:14:30.09:0,30,576	0/0:29,0:29:45.14:0,45,1044	0/1:14,1:15:19.77:20,0,482	1/1:14,13:26:54.13:810,54,0	1/1:11,17:28:33.11:512,33,0	1/1:12,13:24:18.03:280,18,0	0/0:40,0:40:93.31:0,93,2089	0/0:23,1:24:4.37:0,4,1048	0/0:30,0:29:13.85:0,14,1173	0/0:9,0:9:27.09:0,27,637
chr10	99634750	.	TA	T	790.72	PASS	AB=0.795;AC=6;AF=0.115;AN=52;BaseQRankSum=10.353;DP=648;FS=9.601;HRun=1;HaplotypeScore=177.2968;InbreedingCoeff=0.3310;MQ=51.92;MQ0=6;MQRankSum=-9.354;QD=8.32;ReadPosRankSum=-3.472;VQSLOD=-0.7633;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,5:26:68.24:68,0,172	0/0:18,0:17:29.58:0,30,306	./.	./.	0/0:26,0:26:75.26:0,75,1178	0/1:22,8:30:99:228,0,411	0/0:20,0:20:17.37:0,17,216	0/0:42,0:34:99:0,102,1506	1/1:8,9:17:40.58:430,41,0	0/0:32,0:31:89.76:0,90,1300	0/0:20,0:20:32.23:0,32,476	0/0:22,0:22:37.72:0,38,374	0/0:27,0:27:33.30:0,33,350	0/0:18,0:18:32.02:0,32,421	0/0:24,0:24:31.76:0,32,294	0/0:30,0:30:80.70:0,81,1226	0/1:9,4:12:64.05:90,0,64	0/1:5,2:7:3.55:103,0,4	0/0:14,0:13:39.13:0,39,600	0/0:29,0:29:44.98:0,45,906	0/0:17,0:17:31.35:0,31,475	0/0:27,0:26:31.23:0,31,207	0/0:30,0:30:50.78:0,51,540	0/0:23,0:22:28.50:0,28,335	0/0:43,0:43:99:0,129,2034	0/0:24,0:24:64.45:0,64,981	0/0:33,0:32:75:0,75,1149	0/0:9,0:9:27.09:0,27,431
chr10	99635148	.	GAAAGAAAC	G	3625.28	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=10.707;DP=571;FS=14.405;HRun=0;HaplotypeScore=143.7975;InbreedingCoeff=0.8951;MQ=60.47;MQ0=0;MQRankSum=-10.470;QD=37.37;ReadPosRankSum=2.050;VQSLOD=2.5571;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,29:35:66.23:1769,66,0	0/0:14,0:14:39.13:0,39,1635	0/0:21,0:14:19.70:0,20,1067	0/1:9,0:8:5.82:6,0,577	0/0:26,0:26:63.20:0,63,2583	1/1:1,10:11:18.06:483,18,0	0/0:26,0:26:72.25:0,72,3031	0/0:15,0:15:45.15:0,45,1758	1/1:2,7:9:18.06:483,18,0	0/0:30,0:30:87.29:0,87,3378	0/0:21,0:21:54.19:0,54,2272	0/0:18,0:18:51.18:0,51,2061	0/0:15,0:15:42.13:0,42,1635	0/0:23,0:23:63.22:0,63,2690	0/0:34,0:34:96.33:0,96,4100	0/0:25,0:25:69.24:0,69,2835	1/1:6,21:27:21.07:563,21,0	1/1:2,4:6:12.04:322,12,0	0/0:19,0:19:51.18:0,51,2127	0/0:22,0:22:48.15:0,48,1924	0/0:31,0:31:87.30:0,87,3646	0/0:24,0:24:66.23:0,66,2670	0/0:12,0:12:30.09:0,30,1181	0/0:29,0:29:69.24:0,69,2854	0/0:17,0:17:51.18:0,51,2165	0/0:21,0:21:57.20:0,57,2325	0/0:24,0:24:66.22:0,66,2186	0/0:7,0:7:21.07:0,21,876
chr10	99636069	.	T	TA	1715.42	PASS	AB=0.962;AC=14;AF=0.250;AN=56;BaseQRankSum=-8.422;DP=515;FS=2.245;HRun=12;HaplotypeScore=76.7309;InbreedingCoeff=0.7417;MQ=70.71;MQ0=0;MQRankSum=0.134;QD=12.17;ReadPosRankSum=-2.331;VQSLOD=3.0981;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:24:30.27:0,30,89	0/1:11,1:12:2.35:2,0,146	0/0:18,0:15:13.81:0,14,93	0/1:11,0:11:3.76:4,0,37	0/0:26,0:26:60.51:0,61,440	0/0:3,0:17:28.50:0,29,83	0/0:15,0:17:34.84:0,35,247	1/1:12,14:26:42.06:405,42,0	0/0:3,0:10:10.17:0,10,30	0/0:24,0:24:47.65:0,48,349	0/0:22,0:22:47.62:0,48,346	0/0:16,0:16:8.52:0,9,191	0/0:12,0:13:31.84:0,32,223	0/0:13,0:13:32.76:0,33,239	0/0:16,0:16:41.73:0,42,304	0/0:13,1:15:2.64:0,3,172	0/0:1,0:16:28.51:0,29,84	0/0:0,0:15:28.52:0,29,84	1/1:6,11:17:14.15:299,14,0	0/0:26,0:26:59.45:0,59,437	1/1:10,9:19:5.13:212,5,0	0/0:9,0:9:17.85:0,18,131	0/0:21,1:22:21.47:0,21,317	0/0:24,0:24:59.60:0,60,434	0/0:30,0:29:62.51:0,63,459	1/1:4,17:21:51.07:491,51,0	1/1:8,13:21:30.05:292,30,0	1/1:3,10:13:2.13:182,2,0
chr10	99637754	.	C	CAA	1208.10	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.125;DP=645;FS=1.469;HRun=9;HaplotypeScore=82.2653;InbreedingCoeff=0.9919;MQ=81.37;MQ0=0;MQRankSum=-1.716;QD=38.97;ReadPosRankSum=-0.993;VQSLOD=3.4950;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.15:0,75,788	0/0:8,0:8:21.05:0,21,224	0/0:24,1:25:24.10:0,24,424	0/0:9,0:9:17.37:0,17,177	0/0:26,0:26:72:0,72,748	0/0:23,0:23:69.17:0,69,734	0/0:28,0:28:75.11:0,75,785	0/0:34,0:34:78.15:0,78,817	1/1:3,14:18:51.17:782,51,0	0/0:23,0:24:50.86:0,51,598	0/0:20,0:20:54.13:0,54,574	0/0:16,0:16:45.09:0,45,471	0/0:24,0:24:57.10:0,57,596	0/0:29,0:29:69.10:0,69,725	0/0:22,0:20:57.06:0,57,587	0/0:28,0:28:78.16:0,78,822	0/0:26,0:26:69.11:0,69,708	1/1:1,12:13:36.12:548,36,0	0/0:24,0:24:63.12:0,63,662	0/0:39,0:39:99:0,108,1141	0/0:14,0:14:36.07:0,36,374	0/0:23,0:23:60.14:0,60,639	0/0:23,0:23:63.12:0,63,659	0/0:27,0:27:69.09:0,69,705	0/0:21,0:21:48.05:0,48,501	0/0:30,0:30:84.32:0,84,921	0/0:26,0:26:63.12:0,63,670	0/0:17,0:17:51.13:0,51,543
chr10	99637853	.	T	TG	3907.31	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.511;DP=660;FS=1.811;HRun=5;HaplotypeScore=73.4021;InbreedingCoeff=0.9981;MQ=81.93;MQ0=0;MQRankSum=-2.539;QD=32.83;ReadPosRankSum=3.157;VQSLOD=4.2745;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:60.20:789,60,0	0/0:19,0:19:51.11:0,51,540	0/0:24,0:24:60.09:0,60,615	0/0:14,0:14:39.06:0,39,395	0/0:31,0:31:90.22:0,90,966	1/1:2,31:33:78.25:1026,78,0	0/0:25,0:25:72.17:0,72,766	0/0:25,0:25:57.11:0,57,588	1/1:2,23:25:63.20:829,63,0	0/0:27,0:27:72.18:0,72,773	0/0:17,0:17:48.11:0,48,510	0/0:23,0:23:63.15:0,63,677	0/0:19,0:19:54.14:0,54,580	0/0:31,0:31:84.19:0,84,894	0/0:31,0:31:84.21:0,84,903	0/0:25,0:25:66.16:0,66,709	1/1:3,16:19:48.16:631,48,0	1/1:1,16:17:48.16:632,48,0	0/0:29,0:29:78.19:0,78,832	0/0:29,0:29:84.08:0,84,885	0/0:24,0:24:66.17:0,66,709	0/0:29,0:29:87.21:0,87,928	0/0:20,0:20:51.09:0,51,530	0/0:20,0:20:60.10:0,60,626	0/0:18,0:18:51.13:0,51,546	0/0:26,0:26:75.19:0,75,806	0/0:29,0:29:81.18:0,81,862	0/0:6,0:6:18.05:0,18,193
chr10	99638092	.	CTTTCCACAGCTA	C	4037.69	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.031;DP=605;FS=73.257;HRun=0;HaplotypeScore=207.6674;InbreedingCoeff=0.9797;MQ=90.67;MQ0=0;MQRankSum=-10.120;QD=84.12;ReadPosRankSum=1.169;VQSLOD=0.8564;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:17:42.13:1438,42,0	0/0:14,0:14:42.12:0,42,2441	0/0:23,0:23:69.23:0,69,3819	0/0:27,0:27:81.22:0,81,3743	0/0:23,0:23:69.24:0,69,4196	1/1:1,10:11:27.09:1069,27,0	0/0:20,0:20:60.21:0,60,3719	0/0:21,0:21:60.21:0,60,3614	1/1:1,9:10:18.06:647,18,0	0/0:42,0:42:99:0,126,7799	0/0:14,0:14:42.14:0,42,2671	0/0:28,0:28:84.29:0,84,4932	0/0:9,0:9:27.08:0,27,1429	0/0:27,0:27:81.24:0,81,4723	0/0:30,0:30:90.31:0,90,5310	0/0:25,0:25:75.26:0,75,4340	1/1:0,6:6:15.05:594,15,0	1/1:0,4:4:9.03:291,9,0	0/0:26,0:26:78.26:0,78,4301	0/0:40,0:40:99:0,120,7471	0/0:24,0:24:72.25:0,72,4333	0/0:25,0:25:75.26:0,75,4771	0/0:24,0:24:69.24:0,69,4308	0/0:27,0:27:81.28:0,81,5027	0/0:15,0:15:45.15:0,45,2791	0/0:29,0:29:87.30:0,87,5341	0/0:35,0:35:99:0,102,6414	0/0:9,0:9:24.08:0,24,1120
chr10	99638146	.	CT	C	2146.12	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.806;DP=682;FS=33.901;HRun=2;HaplotypeScore=90.4636;InbreedingCoeff=0.9436;MQ=86.80;MQ0=0;MQRankSum=-12.735;QD=29.40;ReadPosRankSum=0.093;VQSLOD=1.4595;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:60.13:747,60,0	0/0:16,0:16:48.16:0,48,719	0/0:28,0:27:78.13:0,78,1084	0/0:22,0:22:63.12:0,63,868	0/0:33,0:33:99:0,99,1466	1/1:0,21:21:57.18:733,57,0	0/0:19,0:19:57.17:0,57,831	0/0:29,0:29:81.27:0,81,1213	1/1:0,20:20:51.11:638,51,0	0/0:53,0:53:99:0,160,2346	0/0:25,0:25:72.23:0,72,1059	0/0:32,0:32:96.33:0,96,1439	0/0:21,0:21:63.21:0,63,942	0/0:22,0:22:66.22:0,66,989	0/0:30,0:30:90.30:0,90,1330	0/0:22,0:22:66.22:0,66,971	1/1:0,5:5:12.04:155,12,0	1/1:0,1:1:3.01:39,3,0	0/0:24,0:24:66.17:0,66,909	0/0:43,0:43:99:0,126,1826	0/0:31,0:31:90.29:0,90,1318	0/0:26,0:26:78.26:0,78,1169	0/0:24,0:24:72.23:0,72,1057	0/0:34,0:34:99:0,99,1381	0/0:18,0:18:54.17:0,54,790	0/0:26,0:26:78.24:0,78,1117	0/0:27,0:27:81.25:0,81,1176	0/0:4,0:4:12.04:0,12,179
chr10	99638908	.	TA	T	3169.86	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.552;DP=619;FS=4.532;HRun=2;HaplotypeScore=70.9334;InbreedingCoeff=0.9955;MQ=78.68;MQ0=0;MQRankSum=-4.072;QD=33.37;ReadPosRankSum=2.096;VQSLOD=4.0219;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:63.20:818,63,0	0/0:11,0:11:33.11:0,33,495	0/0:19,0:19:57.19:0,57,820	0/0:22,0:22:59.79:0,60,854	0/0:41,0:41:99:0,123,1826	1/1:1,30:31:84.27:1090,84,0	0/0:15,0:15:45.15:0,45,674	0/0:33,0:33:96.32:0,96,1422	1/1:1,18:19:51.17:662,51,0	0/0:34,0:34:93.31:0,93,1394	0/0:30,0:30:90.29:0,90,1329	0/0:20,0:20:60.20:0,60,897	0/0:28,0:28:81.27:0,81,1214	0/0:27,0:27:81.27:0,81,1213	0/0:33,0:33:99:0,99,1482	0/0:14,0:14:42.13:0,42,610	1/1:0,11:11:33.11:425,33,0	1/1:0,10:10:27.09:350,27,0	0/0:17,0:17:45.15:0,45,675	0/0:27,0:27:78.25:0,78,1146	0/0:9,0:9:24.08:0,24,360	0/0:19,0:19:57.19:0,57,854	0/0:16,0:16:48.07:0,48,663	0/0:20,0:20:57.19:0,57,853	0/0:15,0:15:45.15:0,45,673	0/0:30,0:30:90.30:0,90,1348	0/0:38,0:38:99:0,114,1655	0/0:6,0:6:15.05:0,15,225
chr10	99640029	.	A	AT	2687.54	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.362;DP=625;FS=1.440;HRun=7;HaplotypeScore=64.7690;InbreedingCoeff=0.9960;MQ=79.28;MQ0=0;MQRankSum=-3.464;QD=25.60;ReadPosRankSum=2.550;VQSLOD=4.3862;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:69.21:834,69,0	0/0:12,0:12:30.03:0,30,284	0/0:18,0:18:42.92:0,43,420	0/0:23,0:24:34.02:0,34,483	0/0:34,0:34:93.13:0,93,891	1/1:2,22:24:60.18:725,60,0	0/0:19,0:19:54.09:0,54,521	0/0:28,0:28:72.09:0,72,686	1/1:2,13:15:36.11:435,36,0	0/0:26,0:26:66.10:0,66,637	0/0:13,0:13:39.05:0,39,373	0/0:30,0:30:83.26:0,83,808	0/0:27,0:27:72.11:0,72,695	0/0:19,0:19:48.06:0,48,458	0/0:22,0:22:60.10:0,60,579	0/0:27,0:27:75.09:0,75,716	1/1:4,17:21:36.11:435,36,0	1/1:3,13:16:36.11:435,36,0	0/0:26,0:26:54.08:0,54,522	0/0:35,0:35:93.11:0,93,888	0/0:29,0:29:78.12:0,78,753	0/0:24,0:24:66.07:0,66,630	0/0:25,0:25:69.08:0,69,655	0/0:13,0:13:39.06:0,39,377	0/0:14,0:14:39.06:0,39,377	0/0:24,0:24:69.11:0,69,666	0/0:25,0:25:66.05:0,66,619	0/0:6,0:6:15.02:0,15,145
chr10	99640919	.	C	CTAT	257.77	PASS	AB=0.583;AC=6;AF=0.107;AN=56;BaseQRankSum=9.099;DP=354;FS=6.294;HRun=0;HaplotypeScore=56.7738;InbreedingCoeff=0.1751;MQ=74.53;MQ0=2;MQRankSum=-0.662;QD=3.91;ReadPosRankSum=3.093;VQSLOD=0.6590;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:3,0:17:44.21:44,0,51	0/0:7,0:7:21.07:0,21,354	0/0:7,0:6:12.84:0,13,136	0/0:12,0:10:16.91:0,17,206	0/0:11,0:12:32.97:0,33,557	0/1:3,1:12:87.98:88,0,99	0/0:3,0:3:9.03:0,9,138	0/0:34,0:37:99:0,101,1529	1/1:0,0:3:9:79,9,0	0/0:12,0:13:36.12:0,36,603	0/0:17,0:18:49.49:0,49,798	0/0:6,0:6:18.06:0,18,290	0/0:8,0:8:21.05:0,21,312	0/0:9,0:9:27.07:0,27,395	0/0:17,0:17:51.16:0,51,839	0/0:7,0:8:24.07:0,24,393	0/1:8,0:21:17.87:18,0,342	0/1:4,0:12:75.66:153,0,76	0/0:18,0:19:57.18:0,57,932	0/0:15,0:17:51.14:0,51,772	0/0:4,0:4:12.04:0,12,224	0/0:1,0:1:3.01:0,3,56	0/0:9,0:9:27.09:0,27,488	0/0:4,0:4:12.04:0,12,208	0/0:20,0:21:60.20:0,60,1014	0/0:22,0:22:66.23:0,66,1169	0/0:18,0:18:54.15:0,54,896	0/0:14,0:15:37.95:0,38,746
chr10	99641189	.	CTGTGTGTGTGTGTGTG	C	698.39	PASS	AB=0.622;AC=7;AF=0.125;AN=56;BaseQRankSum=6.720;DP=568;FS=0.888;HRun=0;HaplotypeScore=209.8450;InbreedingCoeff=0.7376;MQ=69.15;MQ0=14;MQRankSum=-5.874;QD=7.35;ReadPosRankSum=-1.400;VQSLOD=2.5611;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,17:32:0.19:55,0,0	0/0:11,0:11:22.27:0,22,595	0/0:43,0:30:53.75:0,54,533	0/0:46,0:24:35.28:0,35,356	0/0:11,0:11:27.02:0,27,457	0/1:5,9:15:1.45:170,0,1	0/0:18,0:18:37.76:0,38,548	0/0:33,0:33:51.14:0,51,459	1/1:5,0:18:12.59:76,13,0	0/0:18,0:18:45.12:0,45,1029	0/0:7,0:6:18.03:0,18,357	0/0:15,0:15:27.53:0,28,985	0/0:27,0:26:66.10:0,66,1749	0/0:17,0:16:22.77:0,23,1053	0/0:25,0:25:52.64:0,53,1140	0/0:18,0:18:38.95:0,39,1384	0/1:7,12:19:2.41:293,0,2	1/1:11,0:11:18.89:243,19,0	0/0:19,0:19:33.91:0,34,640	0/0:16,0:16:21.11:0,21,784	0/0:20,0:17:23.24:0,23,633	0/0:10,0:10:23.80:0,24,522	0/0:12,0:12:30.04:0,30,761	0/0:28,0:25:54.14:0,54,1579	0/0:22,0:22:38.81:0,39,1203	0/0:23,0:22:40.53:0,41,1012	0/0:22,0:22:49.53:0,50,1273	0/0:11,0:11:22.87:0,23,734
chr10	99641211	.	G	GCT	370.73	PASS	AB=0.965;AC=6;AF=0.107;AN=56;BaseQRankSum=8.017;DP=590;FS=13.300;HRun=0;HaplotypeScore=93.5549;InbreedingCoeff=0.2377;MQ=49.60;MQ0=22;MQRankSum=-6.878;QD=3.31;ReadPosRankSum=-0.578;VQSLOD=0.8069;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,3:36:13.68:153,14,0	0/0:8,0:8:21.07:0,21,320	0/0:21,0:10:27.05:0,27,353	0/0:28,0:8:20.32:0,20,311	0/0:19,0:18:39.08:0,39,541	0/1:21,0:21:91.77:92,0,180	0/0:24,0:22:48.62:0,49,677	0/0:30,0:28:77.10:0,77,903	0/1:20,0:20:42.78:113,0,43	0/0:21,0:21:57.16:0,57,869	0/0:9,0:8:18.06:0,18,285	0/0:24,0:24:54.16:0,54,768	0/0:30,0:29:87.26:0,87,1296	0/0:17,0:16:42.07:0,42,592	0/0:20,0:20:51.16:0,51,774	0/0:20,0:20:45.14:0,45,680	0/1:24,1:25:36.72:37,0,40	0/1:8,1:8:99:104,0,107	0/0:15,0:14:38.29:0,38,433	0/0:17,0:17:31.08:0,31,323	0/0:29,0:26:31.88:0,32,339	0/0:13,0:13:33.10:0,33,501	0/0:17,0:17:33.08:0,33,478	0/0:37,0:32:75.24:0,75,1153	0/0:22,0:22:44.18:0,44,666	0/0:28,0:27:68.60:0,69,892	0/0:18,0:18:43.93:0,44,521	0/0:11,0:11:20.76:0,21,169
chr10	99642054	.	CA	C	5352.98	PASS	AB=0.900;AC=25;AF=0.446;AN=56;BaseQRankSum=16.100;DP=643;FS=2.183;HRun=8;HaplotypeScore=79.1015;InbreedingCoeff=0.9224;MQ=76.37;MQ0=0;MQRankSum=-0.463;QD=18.15;ReadPosRankSum=0.390;VQSLOD=4.7947;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:19:32.59:96,33,0	0/0:8,0:8:24.07:0,24,290	0/0:14,0:13:8.62:0,9,115	0/0:20,0:18:22.97:0,23,235	0/0:31,0:31:81.22:0,81,955	1/1:2,0:31:50.93:151,51,0	0/0:13,0:14:29.89:0,30,312	1/1:7,21:28:60.09:579,60,0	1/1:0,23:23:66.10:636,66,0	0/0:31,1:32:42.27:0,42,987	0/0:32,0:32:87.24:0,87,1019	0/0:25,0:25:72.20:0,72,856	0/0:22,0:22:57.16:0,57,677	0/0:18,0:18:51.16:0,51,616	0/0:27,0:28:78.07:0,78,886	0/0:19,1:20:25.17:0,25,563	1/1:3,0:23:40.74:120,41,0	1/1:5,18:23:54.08:521,54,0	1/1:1,13:14:36.04:341,36,0	1/1:1,31:32:86.97:824,87,0	1/1:1,14:15:36.05:348,36,0	0/0:20,0:20:48.13:0,48,567	0/0:32,1:33:58.28:0,58,956	0/1:16,2:18:6.78:7,0,492	0/0:30,0:31:75.08:0,75,866	1/1:1,28:29:84.11:803,84,0	1/1:5,31:36:87.14:840,87,0	1/1:0,3:3:9.01:87,9,0
chr10	99642312	.	AAG	A	312.10	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=7.006;DP=569;FS=10.408;HRun=0;HaplotypeScore=74.9717;InbreedingCoeff=0.8435;MQ=56.85;MQ0=12;MQRankSum=-1.905;QD=8.44;ReadPosRankSum=-5.645;VQSLOD=0.6742;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:72.80:0,73,1171	0/0:7,0:7:20.94:0,21,210	0/0:18,0:11:20.84:0,21,216	0/1:16,0:3:1.49:1,0,20	0/0:37,0:37:88.19:0,88,1415	0/0:23,0:21:51.94:0,52,772	0/0:16,0:16:39.04:0,39,523	0/0:32,0:32:61.37:0,61,1077	1/1:9,2:10:26.69:231,27,0	0/0:24,0:24:57.98:0,58,888	0/0:16,0:16:16.04:0,16,507	0/0:16,0:16:48.08:0,48,663	0/0:15,0:15:45.03:0,45,576	0/0:16,0:16:45.05:0,45,558	0/0:14,0:14:42.10:0,42,578	0/0:19,0:19:57.14:0,57,777	0/0:43,0:41:99:0,111,1508	1/1:7,3:8:23.89:201,24,0	0/0:19,0:19:53.91:0,54,718	0/0:26,0:25:22.38:0,22,722	0/0:10,0:10:21.03:0,21,299	0/0:16,0:15:44.43:0,44,583	0/0:31,0:31:72.03:0,72,1038	0/0:16,0:16:48.16:0,48,707	0/0:23,0:23:68.72:0,69,847	0/0:27,0:26:75.08:0,75,965	0/0:25,0:25:62.93:0,63,797	0/0:12,0:12:15.38:0,15,407
chr10	99642331	.	GA	G	2121.98	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.704;DP=603;FS=6.154;HRun=10;HaplotypeScore=63.6012;InbreedingCoeff=0.9892;MQ=61.34;MQ0=8;MQRankSum=-0.052;QD=17.25;ReadPosRankSum=3.847;VQSLOD=4.3336;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:35.80:539,36,0	0/0:5,0:5:15.04:0,15,166	0/0:23,0:16:21.09:0,21,251	0/0:21,0:6:17.96:0,18,180	0/0:39,0:40:99:0,105,1135	1/1:1,19:19:53.99:469,54,0	0/0:13,0:13:24.04:0,24,254	0/0:38,0:38:89.58:0,90,897	1/1:3,9:12:23.98:208,24,0	0/0:35,0:35:78.20:0,78,853	0/0:20,0:20:50.91:0,51,494	0/0:18,0:18:42.10:0,42,456	0/0:16,0:16:45.09:0,45,485	0/0:12,0:12:36.09:0,36,390	0/0:18,0:18:39.11:0,39,431	0/0:14,0:14:39.11:0,39,431	1/1:4,41:43:95.97:833,96,0	1/1:4,12:14:19.67:247,20,0	0/0:18,0:18:48.13:0,48,526	0/0:31,0:31:75.46:0,75,777	0/0:6,0:6:18.05:0,18,199	0/0:17,0:17:48.10:0,48,513	0/0:30,0:30:81.15:0,81,870	0/0:16,0:16:45.11:0,45,490	0/0:25,0:26:72.02:0,72,771	0/0:26,0:25:60.16:0,60,663	0/0:23,0:23:66.11:0,66,701	0/0:14,0:14:39.09:0,39,422
chr10	99642586	.	GGGGCT	G	4341.98	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.528;DP=692;FS=2.133;HRun=0;HaplotypeScore=126.8693;InbreedingCoeff=0.9978;MQ=68.18;MQ0=0;MQRankSum=-4.078;QD=51.08;ReadPosRankSum=3.127;VQSLOD=5.2790;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:35:78.27:1641,78,0	0/0:7,0:7:21.07:0,21,659	0/0:19,0:18:51.15:0,51,1336	0/0:22,0:22:59.47:0,59,1566	0/0:22,0:22:66.20:0,66,1959	1/1:1,22:23:60.21:1249,60,0	0/0:31,0:31:93.32:0,93,2855	0/0:27,0:27:81.28:0,81,2490	0/0:23,0:23:66.23:0,66,2070	0/0:18,0:18:53.39:0,53,1509	0/0:16,0:16:45.15:0,45,1328	0/0:34,0:34:99:0,99,3066	0/0:31,0:31:84.27:0,84,2496	0/0:32,0:32:93.32:0,93,2750	0/0:40,0:40:99:0,117,3543	0/0:36,0:36:99:0,105,3133	1/1:0,27:27:69.24:1452,69,0	0/0:21,0:21:60.21:0,60,1884	0/0:21,0:21:57.19:0,57,1677	0/0:21,0:21:57.20:0,57,1773	0/0:32,0:32:87.25:0,87,2434	0/0:16,0:16:48.16:0,48,1506	0/0:19,0:19:57.20:0,57,1788	0/0:21,0:21:63.22:0,63,1932	0/0:29,0:29:84.29:0,84,2600	0/0:36,0:36:99:0,99,2635	0/0:25,0:25:75.26:0,75,2296	0/0:8,0:8:24.08:0,24,739
chr10	99645045	.	GTCTC	G	884.22	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=5.394;DP=831;FS=4.684;HRun=0;HaplotypeScore=177.8894;InbreedingCoeff=0.8684;MQ=53.01;MQ0=41;MQRankSum=-4.243;QD=7.82;ReadPosRankSum=-2.397;VQSLOD=2.0575;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,11:33:23.27:340,23,0	0/0:10,0:11:17.78:0,18,329	0/1:35,0:5:2.25:20,0,2	0/0:64,0:9:7.08:0,7,149	0/0:26,0:25:36.11:0,36,723	1/1:8,15:23:30.31:401,30,0	0/0:34,0:35:64.12:0,64,1333	0/0:53,0:47:69.17:0,69,631	0/0:27,0:27:46.39:0,46,651	0/0:37,0:38:68.43:0,68,1192	0/0:20,0:21:38.83:0,39,702	0/0:25,0:27:59.90:0,60,1204	0/0:25,1:30:36.46:0,36,1422	0/0:13,0:13:33.11:0,33,805	0/0:28,0:28:60.17:0,60,1320	0/0:31,1:36:85.91:0,86,1604	1/1:11,10:21:18.06:271,18,0	0/0:22,0:22:33.02:0,33,461	0/0:27,0:19:18.85:0,19,267	0/0:22,0:21:24.08:0,24,343	0/0:41,0:41:45.14:0,45,662	0/0:18,0:20:29.79:0,30,499	0/0:24,0:25:35.61:0,36,636	0/0:45,0:45:71.93:0,72,1561	0/0:14,0:17:26.83:0,27,578	0/0:36,0:36:62.47:0,62,878	0/0:41,0:40:75.24:0,75,1105	0/0:10,0:11:18.06:0,18,289
chr10	99645053	.	C	CTG	7961.07	PASS	AB=0.867;AC=21;AF=0.375;AN=56;BaseQRankSum=-7.828;DP=852;FS=2.365;HRun=0;HaplotypeScore=136.1026;InbreedingCoeff=0.7606;MQ=53.83;MQ0=51;MQRankSum=-2.453;QD=21.57;ReadPosRankSum=2.331;VQSLOD=5.2329;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,1:36:5.39:100,5,0	0/0:10,0:10:30.01:0,30,329	0/0:43,0:6:4.95:0,5,60	0/0:76,0:10:12.46:0,12,124	0/0:23,0:22:48.04:0,48,615	0/1:23,0:23:15.60:44,0,16	0/0:35,0:35:80.07:0,80,1115	1/1:13,42:51:29.06:1387,29,0	1/1:2,27:30:16.03:776,16,0	0/0:37,0:37:99:0,106,1231	0/0:18,0:18:47.76:0,48,582	0/0:29,0:29:81.10:0,81,998	0/0:31,0:31:81.11:0,81,1072	0/0:14,0:14:42.09:0,42,571	0/0:28,0:28:78.14:0,78,1016	0/0:34,0:32:96.08:0,96,1194	0/1:20,0:20:2.64:3,0,26	1/1:5,20:25:29.50:628,29,0	0/1:8,15:18:1.36:552,0,1	1/1:1,19:19:27.01:478,27,0	1/1:6,36:43:45.15:860,45,0	0/0:19,0:19:51.02:0,51,560	0/0:23,0:23:53.41:0,53,586	0/0:46,0:45:87.12:0,87,1145	0/0:17,0:17:45:0,45,530	1/1:6,33:40:65.07:1476,65,0	1/1:3,34:37:50.25:1351,50,0	1/1:2,10:12:2.12:305,2,0
chr10	99645121	.	A	ATCTG	2072.65	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.551;DP=734;FS=0.656;HRun=0;HaplotypeScore=151.3087;InbreedingCoeff=0.9775;MQ=67.86;MQ0=11;MQRankSum=-2.874;QD=24.38;ReadPosRankSum=1.726;VQSLOD=3.5618;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,32:39:26.84:692,27,0	0/0:4,0:4:12.04:0,12,216	0/0:49,0:26:46.69:0,47,744	0/0:79,0:38:38.89:0,39,597	0/0:19,0:19:45.14:0,45,776	1/1:5,19:25:29.90:778,30,0	0/0:22,0:22:60.20:0,60,1044	0/0:33,0:33:60.03:0,60,1140	0/0:25,0:25:54.16:0,54,910	0/0:30,0:30:84.27:0,84,1446	0/0:18,0:18:51.15:0,51,851	0/0:24,0:24:63.19:0,63,1041	0/0:24,0:24:66.21:0,66,1145	0/0:25,0:25:66.19:0,66,1124	0/0:23,0:23:63.17:0,63,1030	0/0:27,0:27:69.23:0,69,1189	1/1:3,17:21:12.50:742,12,0	0/0:25,0:25:43.77:0,44,809	0/0:22,0:20:57.12:0,57,854	0/0:19,0:19:48.15:0,48,832	0/0:21,0:21:39.06:0,39,593	0/0:22,0:21:57.18:0,57,991	0/0:14,0:14:39.13:0,39,694	0/0:40,0:39:99:0,102,1793	0/0:13,0:13:24.04:0,24,344	0/0:24,0:24:57.19:0,57,987	0/0:27,0:26:63.15:0,63,1008	0/0:15,0:15:30.10:0,30,539
chr10	99646183	.	TG	T	2600.81	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.527;DP=618;FS=0.849;HRun=8;HaplotypeScore=69.2205;InbreedingCoeff=0.9973;MQ=81.26;MQ0=3;MQRankSum=-1.048;QD=21.67;ReadPosRankSum=3.421;VQSLOD=4.0613;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:57.09:550,57,0	0/0:10,0:10:24.05:0,24,275	0/0:39,1:30:35.23:0,35,404	0/0:35,0:29:32.49:0,32,319	0/0:36,0:36:99:0,99,1150	1/1:1,15:16:36.06:347,36,0	0/0:17,0:17:42.12:0,42,496	0/0:33,0:33:87.15:0,87,943	1/1:5,30:35:78.12:751,78,0	0/0:26,0:26:69.15:0,69,797	0/0:16,0:16:42.12:0,42,496	0/0:18,0:18:51.13:0,51,594	0/0:21,0:21:57.16:0,57,667	0/0:23,0:23:69.16:0,69,779	0/0:24,0:24:63.17:0,63,738	0/0:23,0:23:57.16:0,57,675	1/1:1,25:26:66.10:637,66,0	1/1:2,17:19:51.08:492,51,0	0/0:13,0:13:33.09:0,33,386	0/0:23,0:23:57.14:0,57,653	0/0:17,0:17:51.07:0,51,544	0/0:26,0:26:78.22:0,78,920	0/0:16,0:16:36.11:0,36,433	0/0:19,0:19:56.94:0,57,626	0/0:11,0:11:30.07:0,30,339	0/0:22,0:22:63.18:0,63,740	0/0:21,0:21:63.19:0,63,757	0/0:6,0:6:18.06:0,18,217
chr10	99646817	.	CG	C	1899.63	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=14.480;DP=642;FS=0.000;HRun=1;HaplotypeScore=80.9976;InbreedingCoeff=0.9997;MQ=73.20;MQ0=0;MQRankSum=-4.539;QD=21.83;ReadPosRankSum=3.381;VQSLOD=3.8065;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,37:38:99:862,107,0	0/0:11,0:11:33.09:0,33,498	0/0:27,0:27:76.08:0,76,1143	0/0:27,0:25:68.69:0,69,1000	0/0:32,0:32:93.30:0,93,1461	1/1:3,19:22:65.91:570,66,0	0/0:16,0:16:48.14:0,48,742	0/0:38,0:38:99:0,114,1698	0/0:20,0:20:60.17:0,60,908	0/0:26,0:26:78.22:0,78,1197	0/0:16,0:16:48.12:0,48,735	0/0:23,0:23:69.19:0,69,1074	0/0:16,0:16:48.14:0,48,720	0/0:16,0:16:45.15:0,45,718	0/0:25,0:25:75.24:0,75,1168	0/0:16,0:16:48.12:0,48,734	1/1:0,27:27:74.74:611,75,0	0/0:20,0:20:60.20:0,60,958	0/0:31,0:31:93.27:0,93,1367	0/0:25,0:25:75.24:0,75,1174	0/0:25,0:25:72.21:0,72,1116	0/0:13,0:13:39.13:0,39,621	0/0:22,0:22:66.20:0,66,1006	0/0:22,0:22:66.21:0,66,1030	0/0:30,0:30:90.25:0,90,1362	0/0:25,0:25:75.25:0,75,1170	0/0:23,0:23:69.24:0,69,1101	0/0:10,0:10:30.05:0,30,450
chr10	99646819	.	AACG	A	3048.27	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=14.150;DP=645;FS=0.000;HRun=0;HaplotypeScore=105.3990;InbreedingCoeff=0.9995;MQ=73.46;MQ0=0;MQRankSum=-4.253;QD=35.04;ReadPosRankSum=3.517;VQSLOD=4.4081;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,37:38:99:1361,108,0	0/0:11,0:11:33.11:0,33,813	0/0:30,0:30:87.23:0,87,1843	0/0:28,0:26:72.36:0,72,1488	0/0:33,0:33:99:0,99,2423	1/1:3,19:22:66.21:870,66,0	0/0:17,0:17:51.18:0,51,1256	0/0:38,0:38:99:0,114,2764	0/0:19,0:19:57.20:0,57,1403	0/0:26,0:26:78.27:0,78,1904	0/0:16,0:16:45.15:0,45,1055	0/0:22,0:22:66.23:0,66,1626	0/0:15,0:15:45.15:0,45,1109	0/0:16,0:16:45.15:0,45,1107	0/0:24,0:24:72.22:0,72,1673	0/0:15,0:15:45.15:0,45,1081	1/1:0,27:27:75.24:959,75,0	0/0:22,0:22:66.23:0,66,1528	0/0:32,0:32:93.32:0,93,2229	0/0:25,0:25:75.26:0,75,1833	0/0:24,0:24:72.22:0,72,1677	0/0:13,0:13:39.12:0,39,911	0/0:21,0:21:63.20:0,63,1478	0/0:21,0:21:63.22:0,63,1527	0/0:31,0:31:93.32:0,93,2252	0/0:25,0:25:75.26:0,75,1848	0/0:24,0:24:72.25:0,72,1706	0/0:10,0:10:27.09:0,27,663
chr10	99647660	.	G	GCATGCACAACAGGGAA	28728.61	PASS	AB=0.690;AC=13;AF=0.232;AN=56;BaseQRankSum=-1.731;DP=755;FS=6.363;HRun=0;HaplotypeScore=313.9105;InbreedingCoeff=0.8993;MQ=82.97;MQ0=1;MQRankSum=-17.129;QD=131.78;ReadPosRankSum=-4.414;VQSLOD=3.3334;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:93.32:0,93,3923	0/0:10,0:10:30.10:0,30,1084	0/0:24,0:24:46.17:0,46,1293	0/0:27,0:26:54.18:0,54,1795	0/0:22,0:22:57.20:0,57,2353	0/0:21,0:21:54.19:0,54,2373	0/0:24,0:24:60.18:0,60,2429	1/1:43,0:43:99:5182,105,0	0/0:24,0:24:54.19:0,54,2228	0/0:37,0:37:96.33:0,96,4150	0/0:16,0:16:33.11:0,33,1501	0/0:30,0:30:69.20:0,69,2604	0/0:32,0:32:81.25:0,81,3360	0/0:26,0:26:60.21:0,60,2497	0/0:33,0:32:78.25:0,78,3150	0/0:27,0:27:75.26:0,75,3261	0/0:29,0:29:81.07:0,81,3298	0/0:21,0:21:51.18:0,51,2317	1/1:15,6:23:60.21:3301,60,0	1/1:16,14:31:66.10:4134,66,0	1/1:32,6:47:72.16:3669,72,0	0/0:24,0:24:63.19:0,63,2842	0/0:12,0:12:26.83:0,27,1148	0/0:35,0:35:90.30:0,90,3886	0/0:19,0:19:48.16:0,48,2028	0/1:16,12:29:64.23:4592,0,64	1/1:18,12:35:84.76:5894,85,0	1/1:3,7:10:27.09:1957,27,0
chr10	99648463	.	T	TCACA	5801.93	PASS	AB=0.900;AC=41;AF=0.788;AN=52;BaseQRankSum=-2.707;DP=656;FS=0.886;HRun=0;HaplotypeScore=128.8411;InbreedingCoeff=0.3336;MQ=61.42;MQ0=9;MQRankSum=-0.288;QD=10.97;ReadPosRankSum=0.568;VQSLOD=4.1228;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:35,3:37:18.19:430,18,0	0/1:7,0:7:37.12:98,0,37	./.	./.	0/0:21,0:22:18.03:0,18,236	1/1:14,0:22:2.74:12,3,0	0/1:13,4:19:16.09:126,0,16	1/1:31,0:31:11.92:141,12,0	1/1:14,5:25:26.23:387,26,0	1/1:22,0:22:4.78:33,5,0	0/0:15,0:17:12.02:0,12,148	1/1:12,9:25:29.32:584,29,0	1/1:19,4:25:17.31:302,17,0	1/1:13,14:34:29.56:541,30,0	1/1:9,5:23:11.44:165,11,0	1/1:17,7:25:24.08:561,24,0	0/1:17,8:29:10.96:501,0,11	1/1:17,3:19:26.97:364,27,0	1/1:23,0:23:18.06:365,18,0	1/1:20,0:20:3.01:54,3,0	1/1:22,0:21:8.99:93,9,0	1/1:20,11:33:5.97:140,6,0	0/1:17,0:17:11.01:53,0,11	1/1:11,10:27:14.52:235,15,0	0/0:21,0:21:21.23:0,21,249	1/1:20,0:20:18.06:344,18,0	1/1:16,0:15:9.92:161,10,0	0/1:5,0:5:3.98:110,0,4
chr10	99649274	.	TA	T	863.36	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.890;DP=629;FS=10.619;HRun=8;HaplotypeScore=59.3052;InbreedingCoeff=0.8774;MQ=73.13;MQ0=0;MQRankSum=0.469;QD=22.14;ReadPosRankSum=1.201;VQSLOD=3.7653;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.17:0,54,652	0/0:10,0:10:27.08:0,27,323	0/0:7,1:8:0.29:0,0,82	0/0:12,0:12:16.83:0,17,140	0/0:33,0:33:84.11:0,84,981	0/0:31,0:31:90.26:0,90,1075	0/0:16,0:16:48.15:0,48,580	0/0:37,0:37:99:0,99,1176	1/1:2,19:21:54.08:521,54,0	0/0:27,0:27:81.25:0,81,979	0/0:29,0:29:78.23:0,78,932	0/0:23,0:23:63.18:0,63,751	0/0:30,0:30:84.24:0,84,994	0/0:16,0:16:36.11:0,36,435	0/0:27,0:27:57.68:0,58,881	0/0:16,0:16:42.13:0,42,507	0/0:19,0:19:51.14:0,51,605	1/1:2,16:18:48.08:463,48,0	0/0:19,0:19:51.10:0,51,578	0/0:34,0:35:90.25:0,90,1066	0/0:17,0:17:48.14:0,48,569	0/0:14,0:14:36.08:0,36,413	0/0:22,0:22:60.17:0,60,715	0/0:19,0:19:54.13:0,54,620	0/0:26,0:26:69.14:0,69,776	0/0:39,0:39:99:0,99,1187	0/0:35,0:35:99:0,99,1149	0/0:9,0:9:27.08:0,27,326
chr10	99650720	.	CT	C	5820.76	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=13.938;DP=635;FS=6.457;HRun=9;HaplotypeScore=71.5449;InbreedingCoeff=0.8367;MQ=72.22;MQ0=1;MQRankSum=-3.077;QD=19.87;ReadPosRankSum=0.052;VQSLOD=5.2373;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:32.61:613,33,0	0/0:5,0:5:15.03:0,15,163	0/0:17,0:12:10.70:0,11,119	0/0:17,1:13:9.93:0,10,122	0/0:23,0:23:66.18:0,66,751	1/1:3,23:26:66.02:604,66,0	0/0:13,0:13:36.09:0,36,404	1/1:5,42:47:99:1107,126,0	0/1:22,0:22:27.12:35,0,27	0/0:34,0:34:93.27:0,93,1059	0/0:20,0:20:54.14:0,54,606	0/0:30,0:30:81.12:0,81,878	0/0:19,0:19:51.08:0,51,560	0/0:25,0:25:69.16:0,69,765	0/0:25,0:25:63.18:0,63,719	0/0:25,0:25:60.14:0,60,669	1/1:0,21:21:60.03:547,60,0	0/1:22,0:22:13.57:37,0,14	1/1:3,20:23:59.98:537,60,0	1/1:0,22:22:65.96:594,66,0	1/1:2,16:18:42.01:384,42,0	0/0:23,0:23:57.15:0,57,647	0/0:24,0:24:60.15:0,60,673	0/0:13,0:13:33.06:0,33,366	0/0:28,0:28:75.19:0,75,840	1/1:3,16:19:16.39:401,16,0	1/1:3,35:38:83.91:769,84,0	1/1:0,7:7:21.01:192,21,0
chr10	99650729	.	TA	T	1153.22	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=15.486;DP=616;FS=8.024;HRun=7;HaplotypeScore=84.0459;InbreedingCoeff=0.2121;MQ=71.86;MQ0=1;MQRankSum=-0.241;QD=4.63;ReadPosRankSum=2.882;VQSLOD=-0.0075;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:25.20:25,0,55	0/0:5,0:5:12.04:0,12,148	0/0:15,0:10:11.81:0,12,129	0/0:15,0:10:17.56:0,18,160	0/0:25,0:25:75.19:0,75,883	0/1:25,0:25:28.02:30,0,28	0/0:14,0:14:39.10:0,39,457	0/1:46,0:46:38.28:38,0,83	1/1:4,16:20:51.09:512,51,0	0/0:32,0:32:90.27:0,90,1094	0/0:22,0:22:60.14:0,60,692	0/0:27,0:27:69.22:0,69,847	0/0:19,0:19:51.14:0,51,596	0/0:23,0:23:63.20:0,63,772	0/0:23,0:23:66.19:0,66,790	0/0:23,0:23:66.18:0,66,772	0/1:23,0:23:25.29:48,0,25	1/1:2,19:21:57.11:579,57,0	0/0:24,0:24:1.58:0,2,78	0/1:24,0:24:25.88:26,0,30	0/1:17,0:17:15.07:15,0,15	0/0:21,0:21:60.17:0,60,710	0/0:22,0:22:62.86:0,63,734	0/0:12,0:12:30.09:0,30,369	0/0:26,0:26:72.22:0,72,876	0/0:19,0:19:1.47:0,1,79	0/1:39,0:38:28.09:28,0,61	1/1:7,0:7:4.73:14,5,0
chr10	99651960	.	G	GTA	3185.15	PASS	AB=0.900;AC=11;AF=0.196;AN=56;BaseQRankSum=-8.424;DP=475;FS=11.298;HRun=0;HaplotypeScore=53.5765;InbreedingCoeff=0.8334;MQ=65.21;MQ0=2;MQRankSum=0.561;QD=36.19;ReadPosRankSum=1.918;VQSLOD=5.3152;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:9:21.07:355,21,0	0/0:7,0:7:18.06:0,18,243	0/1:8,1:7:9:9,0,91	0/0:11,0:8:3:0,3,37	0/0:27,0:27:75.25:0,75,1014	1/1:1,19:20:51.17:894,51,0	0/0:7,0:7:21.05:0,21,266	0/0:56,0:56:99:0,138,1797	1/1:0,9:9:24.08:421,24,0	0/0:32,0:32:84.26:0,84,1110	0/0:10,0:10:21.07:0,21,284	0/0:10,0:10:21.06:0,21,268	0/0:17,0:17:39.13:0,39,527	0/0:15,0:15:36.12:0,36,487	0/0:14,0:14:42.11:0,42,536	0/0:13,0:13:36.10:0,36,460	1/1:3,22:25:57.20:999,57,0	1/1:1,14:15:39.13:684,39,0	0/0:30,0:30:84.27:0,84,1111	0/0:22,0:22:63.18:0,63,809	0/0:11,0:11:24.08:0,24,325	0/0:2,0:2:6.02:0,6,81	0/0:6,0:6:15.05:0,15,203	0/0:6,0:6:18.06:0,18,243	0/0:19,0:19:51.17:0,51,689	0/0:23,0:23:66.20:0,66,864	0/0:29,0:29:84.27:0,84,1121	0/0:20,0:20:60.16:0,60,774
chr10	99653127	.	C	CA	884.32	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.448;DP=633;FS=0.736;HRun=4;HaplotypeScore=68.4574;InbreedingCoeff=0.9954;MQ=79.44;MQ0=0;MQRankSum=-3.521;QD=26.01;ReadPosRankSum=1.784;VQSLOD=2.6944;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.09:0,57,630	0/0:18,0:18:51.15:0,51,578	0/0:17,0:18:32.80:0,33,403	0/0:16,0:16:18.11:0,18,339	0/0:27,0:27:69.16:0,69,761	0/0:23,0:23:66.17:0,66,739	0/0:20,0:20:57.16:0,57,647	0/0:33,0:33:93.26:0,93,1055	1/1:2,16:18:39.13:533,39,0	0/0:42,0:42:99:0,123,1388	0/0:26,0:26:75.20:0,75,838	0/0:24,0:24:54.15:0,54,613	0/0:23,0:23:69.20:0,69,783	0/0:18,0:18:54.15:0,54,613	0/0:24,0:24:63.18:0,63,714	0/0:21,0:21:57.16:0,57,646	0/0:16,0:16:39.11:0,39,442	1/1:1,15:16:36.09:472,36,0	0/0:29,0:29:81.20:0,81,894	0/0:23,0:23:65.66:0,66,714	0/0:21,0:21:63.16:0,63,705	0/0:20,0:20:51.14:0,51,578	0/0:19,0:19:54.15:0,54,612	0/0:21,0:21:60.13:0,60,665	0/0:32,0:32:93.25:0,93,1044	0/0:24,0:24:66.17:0,66,734	0/0:31,0:31:84.22:0,84,942	0/0:10,0:10:30.05:0,30,317
chr10	99654278	.	CCACCACCACCATCATCATCAT	C	1903.46	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=7.185;DP=715;FS=5.431;HRun=0;HaplotypeScore=361.8901;InbreedingCoeff=0.5942;MQ=50.65;MQ0=19;MQRankSum=-7.397;QD=16.70;ReadPosRankSum=0.490;VQSLOD=0.6780;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:49,0:47:99:218,0,1011	0/0:5,0:4:12.04:0,12,920	0/0:32,0:14:41.11:0,41,610	0/0:28,0:15:38.98:0,39,698	0/0:18,0:18:48.14:0,48,2497	0/0:32,0:31:29.90:0,30,1298	0/0:36,0:36:99:0,108,5026	0/0:22,0:14:42.13:0,42,919	1/1:1,27:28:30.10:1627,30,0	0/0:31,0:31:84.27:0,84,4736	0/0:13,0:13:30.10:0,30,2041	0/0:33,0:33:99:0,99,6381	0/0:35,0:35:99:0,105,6369	0/0:35,0:35:99:0,100,5900	0/0:32,0:32:93.32:0,93,6366	0/0:29,0:29:87.30:0,87,5573	0/1:19,0:19:0.92:1,0,745	1/1:2,14:16:3.48:177,3,0	0/0:19,0:19:48.06:0,48,1714	0/0:16,0:15:37.09:0,37,1422	0/0:55,0:54:99:0,129,6696	0/0:8,0:8:24.08:0,24,1696	0/0:22,0:22:58.91:0,59,3476	0/0:38,0:38:99:0,112,7167	0/0:19,0:19:54.10:0,54,3059	0/0:13,0:11:33.11:0,33,1661	0/0:24,0:23:66.23:0,66,3857	0/0:6,0:5:15.02:0,15,429
chr10	99654323	.	T	TACCACCAC	1668.52	PASS	AB=0.967;AC=5;AF=0.089;AN=56;BaseQRankSum=11.272;DP=740;FS=54.087;HRun=0;HaplotypeScore=244.2527;InbreedingCoeff=0.7031;MQ=66.67;MQ0=8;MQRankSum=-10.117;QD=20.10;ReadPosRankSum=-3.549;VQSLOD=1.0440;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:35,2:35:10.74:872,11,0	0/0:8,0:8:24.07:0,24,564	0/0:32,0:25:67.10:0,67,1785	0/0:29,0:24:39.70:0,40,1549	0/0:18,0:18:54.15:0,54,1475	0/1:28,1:28:99:382,0,165	0/0:30,0:30:81.22:0,81,2023	0/0:32,0:31:90.10:0,90,2204	0/0:26,0:26:36.58:0,37,893	0/0:36,0:36:99:0,108,2979	0/0:18,0:18:51.13:0,51,1331	0/0:32,0:32:96.29:0,96,2399	0/0:34,0:34:99:0,99,2772	0/0:32,0:32:93.21:0,93,2648	0/0:28,0:28:81.25:0,81,2238	0/0:35,0:35:99:0,105,2958	1/1:14,3:17:8.72:532,9,0	0/0:14,0:14:8.58:0,9,60	0/0:16,0:16:45.15:0,45,1216	0/0:11,0:11:30.10:0,30,815	0/0:65,0:64:99:0,172,4425	0/0:19,0:18:47.72:0,48,1286	0/0:24,0:24:65.96:0,66,1867	0/0:41,0:41:99:0,120,3429	0/0:18,0:17:48.16:0,48,1394	0/0:21,0:20:60.21:0,60,1587	0/0:32,0:31:96.27:0,96,2431	0/0:6,0:6:18.06:0,18,513
chr10	99654339	.	C	CTG	2034.39	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.540;DP=713;FS=9.710;HRun=0;HaplotypeScore=117.7088;InbreedingCoeff=0.9398;MQ=74.62;MQ0=0;MQRankSum=-9.437;QD=33.35;ReadPosRankSum=-2.575;VQSLOD=4.5360;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,24:32:51.17:932,51,0	0/0:9,0:9:27.09:0,27,387	0/0:33,0:32:66.48:0,66,1063	0/0:34,0:30:77.96:0,78,954	0/0:16,0:16:45.15:0,45,644	1/1:0,15:15:33.11:603,33,0	0/0:25,0:25:75.24:0,75,1050	0/0:35,0:35:99:0,105,1423	0/0:31,0:31:69.20:0,69,943	0/0:30,0:30:87.29:0,87,1245	0/0:16,0:16:48.16:0,48,686	0/0:24,0:24:63.21:0,63,900	0/0:34,0:34:99:0,99,1416	0/0:28,0:28:81.26:0,81,1142	0/0:28,0:28:78.26:0,78,1116	0/0:39,0:39:99:0,111,1587	1/1:1,13:14:36.12:642,36,0	0/0:7,0:7:3.01:0,3,43	0/0:23,0:23:63.21:0,63,901	0/0:13,0:13:36.12:0,36,513	0/0:59,0:59:99:0,172,2408	0/0:19,0:19:57.19:0,57,814	0/0:25,0:25:72.20:0,72,989	0/0:38,0:38:99:0,114,1590	0/0:20,0:20:60.20:0,60,840	0/0:25,0:25:69.22:0,69,972	0/0:31,0:31:87.28:0,87,1226	0/0:10,0:10:27.09:0,27,383
chr10	99655621	.	G	GT	999.60	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.452;DP=521;FS=2.296;HRun=8;HaplotypeScore=48.7061;InbreedingCoeff=0.9953;MQ=79.11;MQ0=0;MQRankSum=-2.949;QD=27.77;ReadPosRankSum=1.344;VQSLOD=4.2515;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:17:42.11:475,42,0	0/0:12,0:12:36.02:0,36,329	0/0:22,0:23:53.03:0,53,467	0/0:10,0:10:26.97:0,27,239	0/0:32,0:32:87.04:0,87,796	1/1:2,17:19:57.16:647,57,0	0/0:11,0:11:33.02:0,33,302	0/0:26,0:26:66:0,66,595	0/0:11,0:11:27.01:0,27,247	0/0:29,0:29:84.04:0,84,769	0/0:19,0:19:57.01:0,57,515	0/0:9,0:9:27.01:0,27,247	0/0:22,0:23:65.06:0,65,578	0/0:14,0:14:39.01:0,39,353	0/0:21,0:21:51:0,51,462	0/0:21,0:21:57.02:0,57,517	0/0:20,0:20:60:0,60,539	0/0:14,0:14:32.96:0,33,292	0/0:17,0:17:45.02:0,45,412	0/0:30,0:30:84.02:0,84,769	0/0:9,0:9:24.01:0,24,220	0/0:17,0:17:45.02:0,45,412	0/0:18,0:18:45.02:0,45,412	0/0:10,0:10:27:0,27,242	0/0:22,0:22:60.01:0,60,547	0/0:29,0:28:84.02:0,84,761	0/0:30,0:30:84.04:0,84,769	0/0:8,0:8:24.01:0,24,220
chr10	99655686	.	AT	A	1561.83	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.096;DP=532;FS=3.746;HRun=9;HaplotypeScore=50.6177;InbreedingCoeff=0.9359;MQ=72.66;MQ0=0;MQRankSum=-1.830;QD=20.02;ReadPosRankSum=1.836;VQSLOD=4.1122;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:42.02:383,42,0	0/0:6,0:6:15.04:0,15,173	0/0:16,0:14:27.05:0,27,286	0/0:10,0:10:22.58:0,23,225	0/0:42,0:42:99:0,117,1340	1/1:1,17:18:45.02:412,45,0	0/0:17,0:17:45.13:0,45,519	0/0:22,0:22:57.16:0,57,649	1/1:1,14:15:35.97:321,36,0	0/0:23,0:23:44.61:0,45,486	0/0:25,0:25:69.18:0,69,777	0/0:16,0:16:42.12:0,42,485	0/0:23,0:23:66.20:0,66,762	0/0:12,0:12:27.08:0,27,312	0/0:22,0:22:57.15:0,57,639	0/0:21,1:22:38.76:0,39,700	1/1:0,17:17:51.03:467,51,0	1/1:2,7:9:0.57:144,1,0	0/0:14,0:14:30.09:0,30,346	0/0:34,0:34:96.26:0,96,1090	0/0:13,0:13:36.09:0,36,404	0/0:15,0:15:45.13:0,45,519	0/0:16,0:16:45.13:0,45,519	0/0:14,0:14:39.09:0,39,430	0/0:21,0:21:60.17:0,60,682	0/0:25,0:25:66.19:0,66,754	0/0:34,0:34:96.24:0,96,1076	0/0:12,0:12:36.11:0,36,416
chr10	99656328	.	C	CT	3962.88	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.461;DP=874;FS=1.713;HRun=6;HaplotypeScore=87.5941;InbreedingCoeff=0.9999;MQ=81.33;MQ0=0;MQRankSum=-6.171;QD=32.48;ReadPosRankSum=2.254;VQSLOD=3.6922;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,63:68:99:2189,175,0	0/0:18,0:18:51.11:0,51,519	0/0:29,0:29:75.11:0,75,739	0/0:25,0:24:46.02:0,46,408	0/0:31,0:31:81.17:0,81,825	1/1:3,19:22:51.16:642,51,0	0/0:21,0:21:60.13:0,60,612	0/0:33,0:33:75.15:0,75,760	0/0:31,0:31:84.17:0,84,850	0/0:40,0:40:99:0,108,1088	0/0:28,0:28:81.18:0,81,823	0/0:33,0:33:90.18:0,90,910	0/0:18,0:18:54.12:0,54,550	0/0:35,0:35:93.20:0,93,946	0/0:39,0:39:99:0,102,1026	0/0:35,0:35:93.21:0,93,949	1/1:0,32:32:90.29:1132,90,0	0/0:24,0:24:54.07:0,54,539	0/0:17,0:17:45.09:0,45,453	0/0:45,0:45:99:0,114,1154	0/0:46,0:46:99:0,129,1301	0/0:33,0:33:93.20:0,93,941	0/0:25,0:25:69.12:0,69,688	0/0:28,0:28:78.17:0,78,796	0/0:35,0:35:99:0,102,1040	0/0:39,0:39:99:0,105,1071	0/0:30,0:30:90.21:0,90,918	0/0:14,0:14:36.08:0,36,367
chr10	99657287	.	G	GACAGACAGAC	1075.93	PASS	AB=0.731;AC=11;AF=0.196;AN=56;BaseQRankSum=4.095;DP=682;FS=19.196;HRun=0;HaplotypeScore=205.6701;InbreedingCoeff=0.1497;MQ=54.22;MQ0=20;MQRankSum=-4.859;QD=4.48;ReadPosRankSum=-3.764;VQSLOD=0.7345;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,23:42:4.80:0,5,66	0/0:9,0:9:24.08:0,24,434	0/0:13,0:5:10.03:0,10,136	0/0:21,0:10:12.93:0,13,308	0/0:32,0:34:87.26:0,87,1728	0/1:9,24:37:24.26:269,0,24	0/0:24,0:24:66.16:0,66,1250	0/1:40,0:40:61.33:288,0,61	1/1:1,0:10:6.49:235,6,0	0/0:28,0:27:65.90:0,66,1200	0/0:16,0:15:42.14:0,42,838	0/0:32,0:34:96.18:0,96,1603	0/0:25,0:27:78.23:0,78,1597	0/0:19,0:19:29.66:0,30,812	0/0:24,0:26:53.61:0,54,935	0/0:17,0:19:37.12:0,37,586	0/1:28,0:28:99:102,0,451	1/1:14,0:14:20.01:124,20,0	0/0:9,0:16:27.74:0,28,277	0/0:10,0:23:10.27:0,10,475	0/1:25,0:29:31.16:31,0,583	0/0:17,0:19:51.10:0,51,880	0/0:18,0:18:44.80:0,45,852	0/0:21,0:23:57.14:0,57,1117	0/0:25,0:28:62.39:0,62,1448	0/1:11,0:28:95.80:96,0,399	0/1:10,0:29:20.91:21,0,312	0/1:3,0:14:47.24:65,0,47
chr10	99660348	.	T	TC	983.78	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.501;DP=601;FS=0.000;HRun=0;HaplotypeScore=63.5955;InbreedingCoeff=0.9444;MQ=85.02;MQ0=0;MQRankSum=-2.345;QD=36.44;ReadPosRankSum=0.703;VQSLOD=3.2686;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.23:0,72,983	0/0:6,0:6:18.06:0,18,252	0/0:16,0:16:48.16:0,48,669	0/0:23,0:23:53.96:0,54,790	0/0:26,0:24:75.23:0,75,1018	0/0:16,0:16:45.15:0,45,627	0/0:19,0:19:57.19:0,57,796	0/0:40,0:40:99:0,120,1663	1/1:2,14:16:45.15:700,45,0	0/0:36,0:36:99:0,105,1445	0/0:22,0:22:66.22:0,66,919	0/0:20,0:20:60.15:0,60,802	0/0:26,0:26:78.24:0,78,1057	0/0:22,0:22:63.21:0,63,876	0/0:24,0:24:72.23:0,72,990	0/0:20,0:20:57.18:0,57,780	0/0:25,0:25:72.24:0,72,1007	1/1:2,9:11:29.63:405,30,0	0/0:23,0:23:69.21:0,69,929	0/0:14,0:14:42.11:0,42,567	0/0:16,0:16:45.13:0,45,610	0/0:19,0:19:54.18:0,54,755	0/0:18,0:18:51.14:0,51,676	0/0:17,0:17:48.16:0,48,671	0/0:22,0:22:66.18:0,66,875	0/0:31,0:31:87.29:0,87,1212	0/0:46,0:46:99:0,138,1904	0/0:2,0:2:6.02:0,6,84
chr10	99660350	.	C	CT	814.85	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.329;DP=602;FS=0.000;HRun=0;HaplotypeScore=65.5684;InbreedingCoeff=0.9442;MQ=84.41;MQ0=0;MQRankSum=-3.777;QD=30.18;ReadPosRankSum=0.811;VQSLOD=3.6105;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.22:0,66,923	0/0:6,0:6:18.06:0,18,252	0/0:16,0:16:48.14:0,48,637	0/0:22,0:22:54:0,54,729	0/0:26,0:24:75.25:0,75,1047	0/0:16,0:16:48.15:0,48,653	0/0:19,0:19:57.19:0,57,797	0/0:39,0:39:99:0,117,1622	1/1:3,14:17:45.02:579,45,0	0/0:37,0:37:99:0,108,1460	0/0:22,0:22:66.22:0,66,922	0/0:19,0:19:57.19:0,57,792	0/0:26,0:26:78.26:0,78,1091	0/0:22,0:22:66.22:0,66,922	0/0:24,0:24:69.23:0,69,965	0/0:22,0:22:63.18:0,63,834	0/0:25,0:25:75.25:0,75,1048	1/1:1,9:10:27:357,27,0	0/0:24,0:24:66.21:0,66,908	0/0:15,0:15:42.14:0,42,587	0/0:14,0:14:42.14:0,42,586	0/0:20,0:20:60.19:0,60,822	0/0:19,0:19:51.01:0,51,678	0/0:18,0:18:51.17:0,51,713	0/0:21,0:21:63.21:0,63,881	0/0:31,0:31:90.29:0,90,1243	0/0:45,0:45:99:0,132,1845	0/0:2,0:2:6.02:0,6,84
chr10	99660579	.	CTCTCTG	C	1669.64	PASS	AB=0.926;AC=9;AF=0.173;AN=52;BaseQRankSum=6.463;DP=651;FS=17.246;HRun=0;HaplotypeScore=143.6540;InbreedingCoeff=0.6718;MQ=49.23;MQ0=36;MQRankSum=1.059;QD=12.28;ReadPosRankSum=-0.350;VQSLOD=1.6006;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,3:35:9.03:480,9,0	0/0:13,0:13:29.63:0,30,707	./.	./.	0/0:25,0:25:48.16:0,48,1111	1/1:13,7:20:14.81:261,15,0	0/0:28,0:26:54.15:0,54,1025	0/0:44,0:41:99:0,108,1752	1/1:21,7:25:23.41:396,23,0	0/0:35,0:33:84.15:0,84,1887	0/0:19,0:17:33.11:0,33,777	0/0:25,0:24:58.43:0,58,1328	0/0:29,0:29:75.68:0,76,1716	0/0:23,0:23:51.17:0,51,1262	0/0:30,0:30:69.22:0,69,1558	0/0:21,0:21:54.18:0,54,1261	0/1:19,1:19:99:353,0,126	0/1:15,4:16:1.88:324,0,2	0/0:17,0:14:39.11:0,39,710	0/0:26,0:26:49.04:0,49,955	0/0:24,0:20:30.10:0,30,594	0/0:21,0:18:33.11:0,33,816	0/0:16,0:15:30.56:0,31,718	0/0:32,0:30:75.26:0,75,1930	0/0:21,0:20:51.03:0,51,1339	0/0:32,0:30:85.70:0,86,1660	0/0:31,0:31:81.19:0,81,1466	0/1:9,0:6:3:3,0,304
chr10	99660630	.	TCTCTCTCTCA	T	279.04	PASS	AB=0.816;AC=12;AF=0.222;AN=54;BaseQRankSum=4.217;DP=637;FS=1.955;HRun=0;HaplotypeScore=168.7199;InbreedingCoeff=0.1340;MQ=46.60;MQ0=32;MQRankSum=0.113;QD=1.31;ReadPosRankSum=-1.869;VQSLOD=2.7648;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,29:39:49.57:71,0,50	0/0:9,0:9:15.05:0,15,261	0/0:3,0:1:2.99:0,3,24	./.	0/0:23,0:22:48.14:0,48,1464	1/1:3,14:17:2.97:85,3,0	0/0:21,0:19:25.32:0,25,252	0/0:21,0:19:36.17:0,36,236	1/1:3,25:26:3.08:54,3,0	0/0:43,0:41:99:0,109,2156	0/0:23,0:22:16.21:0,16,626	0/0:24,0:22:54.63:0,55,1592	0/0:31,0:31:71.30:0,71,1686	0/0:26,0:25:5.03:0,5,902	0/0:33,0:33:42.94:0,43,1044	0/1:26,0:26:4.49:4,0,1055	0/1:12,13:22:89.64:94,0,90	0/1:10,11:18:33.26:84,0,33	0/0:20,0:14:18.82:0,19,431	0/0:11,0:10:4.99:0,5,14	0/0:14,0:8:3:0,3,25	0/0:32,0:30:47.88:0,48,894	0/0:24,0:23:33.41:0,33,790	0/0:38,0:35:69.30:0,69,1884	0/0:21,0:21:48.13:0,48,1217	0/1:32,0:30:6.71:7,0,943	0/1:20,0:19:8.41:8,0,403	1/1:4,0:2:0.37:1,0,0
chr10	99661478	.	A	AG	1621.95	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-2.590;DP=396;FS=43.185;HRun=3;HaplotypeScore=80.3224;InbreedingCoeff=0.9729;MQ=45.24;MQ0=1;MQRankSum=-2.190;QD=27.96;ReadPosRankSum=0.195;VQSLOD=0.7346;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:30.10:431,30,0	0/0:5,0:5:15.05:0,15,185	0/0:15,0:9:21.07:0,21,260	0/0:9,0:5:15.05:0,15,184	0/0:18,0:18:48.02:0,48,556	1/1:0,14:14:36.12:517,36,0	0/0:14,0:14:39.02:0,39,443	0/0:16,0:16:42.12:0,42,507	1/1:0,10:10:27.09:388,27,0	0/0:34,0:34:82.32:0,82,982	0/0:10,0:9:27:0,27,314	0/0:19,0:19:48.15:0,48,588	0/0:15,0:15:33.10:0,33,403	0/0:13,0:13:36.11:0,36,445	0/0:16,0:16:48.15:0,48,591	0/0:8,0:8:21.07:0,21,260	1/1:0,7:7:12.04:172,12,0	1/1:3,7:10:14.46:286,14,0	0/0:14,0:14:42.12:0,42,509	0/0:17,0:17:47.94:0,48,537	0/0:12,0:12:33.09:0,33,394	0/0:10,0:10:30.09:0,30,369	0/0:13,0:13:39.07:0,39,464	0/0:7,0:7:18.02:0,18,210	0/0:23,0:23:63.72:0,64,812	0/0:16,0:16:48.15:0,48,594	0/0:29,0:29:84.05:0,84,1032	0/0:5,0:5:15.05:0,15,184
chr10	99661584	.	T	TTGCTGATGC	9620.03	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-6.503;DP=529;FS=65.484;HRun=0;HaplotypeScore=143.3791;InbreedingCoeff=0.9971;MQ=65.22;MQ0=0;MQRankSum=-11.500;QD=108.09;ReadPosRankSum=4.060;VQSLOD=2.5277;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,17:29:66.18:3110,66,0	0/0:11,0:11:33.10:0,33,900	0/0:29,0:28:72.83:0,73,2215	0/0:18,0:17:48.13:0,48,1211	0/0:23,0:23:63.22:0,63,2003	1/1:1,7:11:24.08:1169,24,0	0/0:15,0:15:36.12:0,36,1138	0/0:24,0:24:72.21:0,72,1916	1/1:0,6:11:18.06:908,18,0	0/0:21,0:21:60.18:0,60,1843	0/0:14,0:14:42.14:0,42,1311	0/0:26,0:26:72.23:0,72,2219	0/0:17,0:17:51.18:0,51,1600	0/0:12,0:12:33.11:0,33,1048	0/0:20,0:20:60.21:0,60,1906	0/0:13,0:13:39.09:0,39,1051	1/1:3,11:16:33.11:1607,33,0	1/1:9,12:22:60.21:2826,60,0	0/0:19,0:18:54.18:0,54,1554	0/0:16,0:16:45.15:0,45,1416	0/0:45,0:45:99:0,129,4047	0/0:9,0:9:27.09:0,27,880	0/0:12,0:12:33.08:0,33,880	0/0:29,0:29:78.22:0,78,2287	0/0:16,0:16:42.12:0,42,1295	0/0:22,0:22:63.22:0,63,2030	0/0:16,0:16:39.13:0,39,1257	0/0:13,0:13:36.08:0,36,1043
chr10	99662051	.	TA	T	1615.92	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=10.502;DP=414;FS=6.967;HRun=8;HaplotypeScore=44.6211;InbreedingCoeff=0.8462;MQ=57.33;MQ0=1;MQRankSum=-4.151;QD=19.01;ReadPosRankSum=0.076;VQSLOD=2.9432;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,18:25:57.07:544,57,0	0/0:3,0:3:9.03:0,9,109	0/1:11,0:3:9.12:9,0,25	0/0:11,0:2:4.26:0,4,39	0/0:26,0:26:69.21:0,69,834	1/1:2,13:15:45.06:428,45,0	0/0:14,0:14:36.11:0,36,435	0/0:32,0:31:78.20:0,78,903	1/1:2,4:6:12.01:116,12,0	0/0:21,0:21:57.17:0,57,688	0/0:18,0:18:51.16:0,51,616	0/0:13,0:13:35.98:0,36,413	0/0:12,0:12:33.08:0,33,384	0/0:9,0:9:24.06:0,24,277	0/0:17,0:17:51.16:0,51,616	0/0:16,0:16:42.12:0,42,498	1/1:2,10:12:30.04:290,30,0	1/1:2,14:16:42.06:405,42,0	0/0:8,0:8:21.06:0,21,254	0/0:15,0:15:39.12:0,39,471	0/0:6,0:6:18.06:0,18,217	0/0:7,0:7:18.05:0,18,214	0/0:9,0:9:24.07:0,24,290	0/0:9,0:9:24.07:0,24,290	0/0:15,0:15:36.11:0,36,435	0/0:17,0:17:42.13:0,42,507	0/0:23,0:23:66.20:0,66,797	0/0:28,0:28:81.25:0,81,979
chr10	99662089	.	T	TA	2134.83	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.883;DP=465;FS=11.094;HRun=5;HaplotypeScore=53.0496;InbreedingCoeff=0.9937;MQ=76.91;MQ0=0;MQRankSum=-6.895;QD=28.46;ReadPosRankSum=0.412;VQSLOD=3.0409;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:21:48.14:601,48,0	0/0:6,0:6:18.03:0,18,185	0/0:10,0:10:29.88:0,30,282	0/0:12,0:12:21.05:0,21,223	0/0:30,0:30:84.21:0,84,903	1/1:4,11:15:36.10:442,36,0	0/0:18,0:18:45.11:0,45,484	0/0:30,0:30:78.19:0,78,831	1/1:0,7:7:21.07:269,21,0	0/0:15,0:15:45.11:0,45,481	0/0:19,0:19:57.14:0,57,612	0/0:16,0:16:42.10:0,42,451	0/0:16,0:16:48.12:0,48,515	0/0:11,0:11:33.08:0,33,355	0/0:21,0:21:60.15:0,60,645	0/0:18,0:18:48.12:0,48,516	1/1:1,12:13:30.10:383,30,0	1/1:2,17:19:48.15:614,48,0	0/0:8,0:8:18.04:0,18,193	0/0:15,0:15:42.10:0,42,451	0/0:14,0:14:42.11:0,42,451	0/0:9,0:9:27.07:0,27,290	0/0:12,0:12:33.08:0,33,355	0/0:20,0:20:60.13:0,60,635	0/0:18,0:18:48.12:0,48,516	0/0:22,0:22:66.16:0,66,704	0/0:21,0:21:60.13:0,60,634	0/0:29,0:29:81.20:0,81,871
chr10	99662607	.	C	CTA	3879.66	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.910;DP=531;FS=0.962;HRun=0;HaplotypeScore=61.3454;InbreedingCoeff=0.9903;MQ=85.18;MQ0=0;MQRankSum=-3.806;QD=39.59;ReadPosRankSum=1.200;VQSLOD=5.5262;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:48.16:810,48,0	0/0:4,0:4:12.04:0,12,154	0/0:19,0:19:19.18:0,19,414	0/0:16,0:16:30.10:0,30,384	0/0:22,0:22:60.19:0,60,772	1/1:3,18:23:54.18:907,54,0	0/0:12,0:12:33.11:0,33,425	0/0:30,0:30:72.22:0,72,905	1/1:3,13:16:39.13:658,39,0	0/0:31,0:31:75.21:0,75,931	0/0:15,0:15:42.14:0,42,540	0/0:15,0:15:30.10:0,30,386	0/0:16,0:16:42.12:0,42,526	0/0:16,0:16:45.13:0,45,565	0/0:11,0:11:30.10:0,30,386	0/0:23,0:23:66.21:0,66,838	1/1:3,15:18:42.14:709,42,0	1/1:3,18:21:37.25:796,37,0	0/0:11,0:11:30.10:0,30,386	0/0:26,0:26:63.19:0,63,797	0/0:10,0:10:27.09:0,27,348	0/0:14,0:14:36.12:0,36,461	0/0:22,0:22:60.18:0,60,758	0/0:12,0:12:27.07:0,27,334	0/0:21,0:21:60.18:0,60,758	0/0:32,0:32:87.28:0,87,1112	0/0:38,0:37:99:0,102,1313	0/0:17,0:17:51.17:0,51,656
chr10	99665100	.	T	TC	2619.05	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-10.262;DP=701;FS=1.628;HRun=1;HaplotypeScore=64.4529;InbreedingCoeff=0.9994;MQ=89.33;MQ0=0;MQRankSum=-2.922;QD=36.89;ReadPosRankSum=2.944;VQSLOD=4.2384;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:60.20:899,60,0	0/0:13,0:13:39.11:0,39,491	0/0:27,0:27:78.15:0,78,930	0/0:27,0:27:76.63:0,77,859	0/0:26,0:26:78.25:0,78,1000	1/1:0,47:47:99:1842,123,0	0/0:26,0:26:78.15:0,78,974	0/0:37,0:37:99:0,99,1227	0/0:28,0:28:78.25:0,78,1005	0/0:29,0:29:84.27:0,84,1089	0/0:20,0:20:60.20:0,60,778	0/0:22,0:22:66.20:0,66,841	0/0:23,0:23:66.18:0,66,822	0/0:27,0:27:81.25:0,81,1037	0/0:29,0:29:84.26:0,84,1074	0/0:27,0:27:81.26:0,81,1051	0/0:16,0:16:48.11:0,48,591	0/0:9,0:9:27.09:0,27,350	0/0:18,0:18:54.18:0,54,701	0/0:28,0:28:81.20:0,81,1030	0/0:27,0:27:81.20:0,81,991	0/0:32,0:32:96.29:0,96,1230	0/0:25,0:25:75.24:0,75,973	0/0:16,0:16:45.13:0,45,569	0/0:23,0:23:66.20:0,66,842	0/0:27,0:27:75.24:0,75,962	0/0:25,0:25:75.23:0,75,958	0/0:23,0:22:63.18:0,63,799
chr10	99665304	.	GCA	G	781.48	PASS	AB=0.897;AC=29;AF=0.558;AN=52;BaseQRankSum=6.382;DP=498;FS=10.595;HRun=0;HaplotypeScore=66.8046;InbreedingCoeff=-0.0340;MQ=66.44;MQ0=7;MQRankSum=0.760;QD=2.16;ReadPosRankSum=2.450;VQSLOD=0.5486;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,1:30:20.21:20,0,118	0/1:8,2:10:23.21:23,0,79	./.	0/1:29,0:20:0:0,0,0	0/1:7,1:8:17.25:17,0,100	1/1:11,0:27:22.38:107,22,0	0/1:16,2:19:14.25:14,0,138	./.	0/1:15,5:20:11.22:11,0,200	0/1:12,4:16:20.21:20,0,104	0/1:10,1:11:17.21:17,0,119	0/0:13,0:13:3.01:0,3,42	0/1:13,0:13:14.07:14,0,203	0/0:16,0:16:11.40:0,11,134	1/1:13,4:19:11.70:92,12,0	0/1:12,3:15:14.18:14,0,203	1/1:10,0:18:10.08:46,10,0	0/0:11,0:11:8.99:0,9,104	1/1:9,1:10:3.01:32,3,0	1/1:18,3:21:14.83:131,15,0	1/1:20,6:23:9.02:96,9,0	1/1:14,0:14:6.23:33,6,0	0/1:13,0:13:7.71:8,0,97	0/0:23,0:23:21.49:0,21,264	0/0:26,0:26:23.54:0,24,293	0/1:19,1:20:43.32:93,0,43	1/1:13,5:18:12.03:129,12,0	0/1:3,1:4:16.78:26,0,17
chr10	99665438	.	CA	C	383.66	PASS	AB=0.848;AC=7;AF=0.125;AN=56;BaseQRankSum=-1.472;DP=511;FS=4.326;HRun=15;HaplotypeScore=87.8675;InbreedingCoeff=0.3127;MQ=79.25;MQ0=1;MQRankSum=-0.076;QD=3.02;ReadPosRankSum=2.110;VQSLOD=0.4642;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:12,16:29:0.13:232,0,0	0/0:12,2:15:2.73:0,3,240	0/1:27,3:21:10.30:10,0,54	0/0:28,0:22:11.22:0,11,64	0/0:16,1:19:12.02:0,12,231	1/1:5,11:16:38.36:247,38,0	0/1:14,1:16:6.12:6,0,203	0/0:15,0:20:33.90:0,34,180	0/0:13,0:15:18.92:0,19,180	0/1:17,2:19:1.36:1,0,215	0/0:15,0:16:17.54:0,18,253	0/0:15,0:18:29.19:0,29,228	0/0:18,0:18:30.31:0,30,251	0/0:6,0:6:11.99:0,12,102	0/0:13,0:13:26.13:0,26,205	0/0:11,1:13:13.58:0,14,231	0/0:18,0:18:42.86:0,43,220	0/0:13,0:13:15:0,15,132	0/0:12,0:13:20.17:0,20,91	0/0:6,0:31:32.87:0,33,175	0/0:2,0:7:0:0,0,0	0/0:16,1:17:6.02:0,6,162	0/0:17,1:18:19.62:0,20,284	0/0:16,0:16:8.40:0,8,237	0/1:13,1:15:8.74:9,0,158	0/0:7,0:24:37.83:0,38,176	0/0:25,0:25:22.14:0,22,195	0/0:13,0:14:18.88:0,19,85
chr10	99666315	.	C	CCACA	646.96	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.192;DP=685;FS=0.000;HRun=0;HaplotypeScore=135.7768;InbreedingCoeff=0.9287;MQ=72.33;MQ0=4;MQRankSum=-2.811;QD=8.19;ReadPosRankSum=-0.318;VQSLOD=2.4890;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,2:31:5.91:27,6,0	0/0:12,0:13:33.09:0,33,491	0/0:37,0:22:26.79:0,27,397	0/0:45,0:38:16.12:0,16,640	0/0:22,0:22:48.16:0,48,790	1/1:5,5:17:12:129,12,0	0/0:30,0:30:69.10:0,69,1094	0/0:41,0:41:84.21:0,84,1227	1/1:12,0:14:23.19:351,23,0	0/0:19,0:19:42.11:0,42,688	0/0:16,0:16:36.12:0,36,595	0/0:23,0:24:60.18:0,60,942	0/0:24,0:24:60.18:0,60,938	0/0:21,0:21:57.18:0,57,898	0/0:20,0:20:36.11:0,36,570	0/0:23,0:23:25.51:0,26,984	0/0:36,0:36:73.65:0,74,1144	1/1:12,0:14:7.13:284,7,0	0/0:20,0:20:54.18:0,54,888	0/0:21,0:21:54.16:0,54,854	0/0:37,0:37:99:0,105,1732	0/0:17,0:17:30.08:0,30,442	0/0:25,0:25:60.14:0,60,938	0/0:28,0:28:75.25:0,75,1250	0/0:25,0:26:62.20:0,62,930	0/0:29,0:29:72.13:0,72,1123	0/0:19,0:19:42.13:0,42,672	0/0:13,0:13:21.07:0,21,339
chr10	99666349	.	G	GCA	335.74	PASS	AB=0.831;AC=6;AF=0.107;AN=56;BaseQRankSum=7.565;DP=612;FS=16.731;HRun=0;HaplotypeScore=96.9723;InbreedingCoeff=0.2745;MQ=57.31;MQ0=7;MQRankSum=-1.647;QD=3.73;ReadPosRankSum=0.583;VQSLOD=1.0996;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,17:30:8.90:123,0,9	0/0:10,0:10:27.06:0,27,382	0/1:10,0:2:3.06:3,0,28	0/0:5,0:3:4.24:0,4,27	0/0:23,0:23:61.95:0,62,830	1/1:12,5:17:12.51:169,13,0	0/0:26,0:26:75.01:0,75,969	0/0:26,0:25:69.07:0,69,915	0/1:13,0:15:37.29:37,0,49	0/0:19,0:18:54.18:0,54,801	0/0:17,0:17:48.09:0,48,665	0/0:20,0:20:60.16:0,60,868	0/0:19,0:19:57.07:0,57,733	0/0:18,0:18:51.16:0,51,748	0/0:12,0:12:30.05:0,30,423	0/0:23,0:24:34.97:0,35,841	0/0:35,0:35:16.99:0,17,297	0/1:13,0:16:99:124,0,191	0/0:28,0:28:65.73:0,66,794	0/0:24,0:24:69.13:0,69,911	0/0:58,0:56:99:0,149,1954	0/0:16,0:16:48.04:0,48,602	0/0:28,0:28:84.09:0,84,1127	0/0:32,0:31:87.16:0,87,1210	0/0:24,0:24:66.11:0,66,886	0/0:28,0:28:72.22:0,72,1023	0/0:16,0:15:39.05:0,39,519	0/0:13,0:13:38.90:0,39,469
chr10	99666353	.	G	GCACACACA	916.44	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=7.394;DP=617;FS=7.284;HRun=0;HaplotypeScore=166.0803;InbreedingCoeff=0.6610;MQ=57.87;MQ0=7;MQRankSum=-4.409;QD=8.41;ReadPosRankSum=-0.871;VQSLOD=1.9434;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:31:10.93:67,0,11	0/0:10,0:10:27.04:0,27,510	0/0:14,0:4:11.02:0,11,131	0/0:9,0:6:5.05:0,5,113	0/0:24,0:24:63.12:0,63,1397	1/1:19,0:19:13.95:94,14,0	0/0:27,0:27:63.09:0,63,1323	0/0:26,0:25:47.15:0,47,702	1/1:4,9:14:9.03:371,9,0	0/0:20,0:19:45.14:0,45,1061	0/0:17,0:17:44.81:0,45,1083	0/0:23,0:23:54.11:0,54,1262	0/0:21,0:21:54.08:0,54,1224	0/0:18,0:18:51.17:0,51,1289	0/0:11,0:11:30.05:0,30,682	0/1:24,0:24:19.46:19,0,1464	0/0:34,0:34:37.90:0,38,1055	1/1:19,0:18:42.40:512,42,0	0/0:24,0:24:59.99:0,60,1303	0/0:21,0:23:60.15:0,60,1366	0/0:59,0:57:99:0,141,3264	0/0:14,0:14:39.10:0,39,944	0/0:28,0:28:82.16:0,82,2002	0/0:32,0:31:82.11:0,82,1901	0/0:24,0:24:66.23:0,66,1669	0/0:25,0:25:75.11:0,75,1669	0/0:15,0:14:39.09:0,39,853	0/0:10,0:10:30.10:0,30,735
chr10	99667026	.	GT	G	2135.57	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.260;DP=669;FS=1.673;HRun=2;HaplotypeScore=62.3810;InbreedingCoeff=0.9989;MQ=90.76;MQ0=1;MQRankSum=-4.828;QD=35.59;ReadPosRankSum=1.270;VQSLOD=4.1453;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,46:46:99:1712,132,0	0/0:10,0:10:27.09:0,27,405	0/0:34,0:34:99:0,99,1400	0/0:20,0:20:57.18:0,57,820	0/0:20,0:20:57.19:0,57,848	1/1:0,14:14:42.14:545,42,0	0/0:29,0:29:84.28:0,84,1252	0/0:28,0:28:81.27:0,81,1212	0/0:21,0:21:57.19:0,57,854	0/0:25,0:25:75.23:0,75,1100	0/0:9,0:9:27.09:0,27,404	0/0:21,0:21:63.21:0,63,944	0/0:20,0:20:60.18:0,60,861	0/0:22,0:22:66.21:0,66,968	0/0:37,0:37:99:0,108,1595	0/0:19,0:19:57.19:0,57,853	0/0:34,0:34:99:0,102,1523	0/0:22,0:21:57.19:0,57,849	0/0:24,0:24:72.24:0,72,1075	0/0:29,0:29:81.26:0,81,1191	0/0:39,0:39:99:0,111,1621	0/0:22,0:22:63.20:0,63,924	0/0:16,0:16:48.16:0,48,718	0/0:22,0:22:66.21:0,66,967	0/0:19,0:19:57.19:0,57,852	0/0:29,0:29:87.29:0,87,1284	0/0:24,0:24:72.20:0,72,1018	0/0:14,0:14:42.14:0,42,630
chr10	99668012	.	A	AC	1037.43	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.304;DP=692;FS=0.689;HRun=6;HaplotypeScore=66.7113;InbreedingCoeff=0.9992;MQ=80.75;MQ0=0;MQRankSum=-3.226;QD=29.64;ReadPosRankSum=2.160;VQSLOD=4.3819;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.16:0,72,734	0/0:12,0:12:30.07:0,30,306	0/0:15,0:15:41.96:0,42,397	0/0:19,0:19:40.30:0,40,347	0/0:29,0:29:72.12:0,72,725	0/0:21,0:21:60.13:0,60,612	0/0:25,0:25:66.15:0,66,673	0/0:25,0:25:36.06:0,36,361	0/0:22,0:22:60.13:0,60,612	0/0:28,0:28:78.17:0,78,795	0/0:21,0:21:60.13:0,60,612	0/0:37,0:37:95.56:0,96,949	0/0:23,0:23:69.16:0,69,703	0/0:29,0:29:84.18:0,84,855	0/0:31,0:31:78.17:0,78,795	0/0:26,0:26:72.16:0,72,733	1/1:4,31:35:90.29:1132,90,0	0/0:26,0:26:66.14:0,66,673	0/0:20,0:20:51.12:0,51,520	0/0:29,0:29:81.18:0,81,823	0/0:18,0:18:45.10:0,45,459	0/0:28,0:28:78.17:0,78,795	0/0:26,0:26:69.13:0,69,696	0/0:25,0:25:66.10:0,66,656	0/0:18,0:18:51.11:0,51,520	0/0:29,0:29:75.16:0,75,765	0/0:32,0:32:90.19:0,90,911	0/0:15,0:15:39.06:0,39,389
chr10	99670190	.	C	CT	3947.35	PASS	AB=0.565;AC=13;AF=0.250;AN=52;BaseQRankSum=-6.824;DP=387;FS=1.606;HRun=0;HaplotypeScore=39.1190;InbreedingCoeff=0.8703;MQ=51.24;MQ0=21;MQRankSum=-3.090;QD=34.32;ReadPosRankSum=-1.802;VQSLOD=2.6230;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:35:93.31:0,93,1293	0/0:8,0:8:21.07:0,21,293	./.	./.	0/0:8,0:8:24.08:0,24,335	0/0:13,0:12:30.10:0,30,418	0/0:10,0:10:24.08:0,24,335	1/1:2,19:20:60.13:895,60,0	0/0:17,0:17:48.16:0,48,669	0/0:16,0:13:36.12:0,36,503	0/0:15,0:14:36.12:0,36,495	0/0:9,0:8:21.07:0,21,287	0/0:14,0:14:39.13:0,39,544	0/0:14,0:14:39.12:0,39,527	0/0:17,0:15:39.13:0,39,543	0/0:4,0:4:12.04:0,12,168	0/0:21,0:20:51.13:0,51,690	0/0:20,0:18:45.13:0,45,611	1/1:4,6:4:12.04:191,12,0	1/1:0,24:22:57.19:911,57,0	0/1:3,10:13:20.37:267,0,20	0/0:10,0:10:27.09:0,27,375	0/0:9,0:8:24.08:0,24,333	0/0:9,0:7:21.07:0,21,293	0/0:18,0:16:48.16:0,48,670	1/1:3,23:25:30.42:1061,30,0	1/1:1,11:11:30.07:479,30,0	1/1:0,9:8:9.03:144,9,0
chr10	99671084	.	T	TCCTGG	5022.46	PASS	AB=0.550;AC=13;AF=0.232;AN=56;BaseQRankSum=-8.915;DP=627;FS=0.507;HRun=0;HaplotypeScore=115.3805;InbreedingCoeff=0.8959;MQ=87.70;MQ0=0;MQRankSum=-3.898;QD=41.85;ReadPosRankSum=0.814;VQSLOD=4.9663;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,132,2530	0/0:10,0:10:27.09:0,27,526	0/0:24,0:24:59.91:0,60,1017	0/0:27,0:26:47.95:0,48,845	0/0:24,0:24:51.17:0,51,994	0/0:33,0:33:87.30:0,87,1696	0/0:17,0:17:36.12:0,36,690	1/1:11,5:18:21.07:458,21,0	0/0:22,0:22:60.21:0,60,1129	0/0:14,0:14:36.12:0,36,681	0/0:34,0:34:80.92:0,81,1527	0/0:13,0:13:36.12:0,36,680	0/0:23,0:23:57.20:0,57,1100	0/0:17,0:17:48.16:0,48,918	0/0:38,0:38:93.32:0,93,1783	0/0:33,0:33:78.24:0,78,1433	0/0:33,0:33:81.26:0,81,1510	0/0:12,0:12:33.05:0,33,570	1/1:11,7:20:24.08:702,24,0	1/1:6,17:22:36.12:1003,36,0	1/1:9,11:22:21.07:619,21,0	0/0:24,0:24:57.18:0,57,1055	0/0:21,0:21:57.20:0,57,1111	0/0:16,0:16:42.14:0,42,819	0/0:21,0:21:54.18:0,54,1017	0/1:2,8:11:31.41:650,0,31	1/1:2,13:16:36.12:1061,36,0	1/1:2,6:8:18.06:530,18,0
chr10	99672659	.	GA	G	3233.06	PASS	AB=0.578;AC=13;AF=0.250;AN=52;BaseQRankSum=6.392;DP=735;FS=8.407;HRun=2;HaplotypeScore=57.4015;InbreedingCoeff=0.9089;MQ=43.56;MQ0=82;MQRankSum=0.074;QD=19.13;ReadPosRankSum=-0.456;VQSLOD=2.7396;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:33:69.23:0,69,1031	0/0:11,0:10:24.08:0,24,360	./.	./.	0/0:39,0:30:53.81:0,54,783	0/0:31,0:29:57.17:0,57,815	0/0:21,0:17:36.12:0,36,511	1/1:7,21:10:24.04:289,24,0	0/0:33,0:28:57.16:0,57,802	0/0:31,0:25:75.25:0,75,1123	0/0:34,0:28:45.15:0,45,672	0/0:24,0:18:36.12:0,36,539	0/0:20,0:18:45.11:0,45,647	0/0:22,0:17:36.12:0,36,538	0/0:43,0:35:72.24:0,72,1067	0/0:24,0:22:60.19:0,60,868	0/0:39,0:30:66.21:0,66,963	0/0:23,0:19:39.13:0,39,575	1/1:5,15:16:45.14:568,45,0	1/1:6,29:21:5.92:470,6,0	1/1:3,8:8:21.07:265,21,0	0/0:34,0:28:60.15:0,60,853	0/0:34,0:28:57.17:0,57,802	0/0:30,0:28:54.18:0,54,802	0/0:32,0:27:75.21:0,75,1089	0/1:10,27:28:3.13:890,0,3	1/1:4,18:15:36.12:467,36,0	1/1:2,14:13:36.12:467,36,0
chr10	99674276	.	GTGTGCCTGTGCC	G	3835.16	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=8.048;DP=451;FS=6.717;HRun=0;HaplotypeScore=143.6568;InbreedingCoeff=0.9168;MQ=60.89;MQ0=8;MQRankSum=-6.243;QD=37.23;ReadPosRankSum=1.351;VQSLOD=2.7106;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:69.24:0,69,3622	0/0:4,0:4:6.02:0,6,289	0/0:40,0:26:14.74:0,15,174	0/0:20,0:10:6.02:0,6,116	0/0:9,0:9:15.05:0,15,804	0/0:18,0:18:39.12:0,39,1895	0/0:15,0:15:42.13:0,42,1866	1/1:20,0:19:23.58:313,24,0	0/0:6,0:18:15.05:0,15,612	0/0:17,0:17:42.14:0,42,2024	0/0:18,0:18:37.83:0,38,1637	0/0:8,0:8:18.06:0,18,1062	0/0:12,0:12:33.10:0,33,1509	0/0:16,0:16:36.10:0,36,1716	0/0:15,0:15:36.12:0,36,1925	0/0:5,0:5:12.03:0,12,436	0/0:11,0:24:14.95:0,15,139	0/0:8,0:19:21.04:0,21,703	1/1:8,10:18:29.57:574,30,0	1/1:2,12:14:9.03:315,9,0	./.	0/0:4,0:4:12.04:0,12,708	0/0:13,0:13:39.12:0,39,1999	0/0:13,0:13:36.12:0,36,1897	0/0:12,0:12:30.09:0,30,1466	1/1:2,13:15:38.79:1067,39,0	1/1:3,16:19:30.10:938,30,0	1/1:2,15:17:18.06:627,18,0
chr10	99676634	.	AATT	A	499.39	PASS	AB=1.000;AC=5;AF=0.096;AN=52;BaseQRankSum=5.566;DP=205;FS=2.350;HRun=0;HaplotypeScore=30.3249;InbreedingCoeff=0.3558;MQ=76.73;MQ0=0;MQRankSum=1.431;QD=11.10;ReadPosRankSum=2.081;VQSLOD=2.2770;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:12.04:0,12,240	0/0:2,0:2:6.01:0,6,89	0/0:4,0:3:2.50:0,2,9	0/1:23,0:12:5.47:5,0,27	0/0:6,0:6:12.03:0,12,212	0/0:5,0:5:15.03:0,15,281	0/0:3,0:3:9.02:0,9,156	0/0:39,0:39:99:0,102,1966	1/1:2,2:4:3.01:46,3,0	0/0:10,0:10:12.04:0,12,258	0/0:6,0:6:12.02:0,12,180	0/0:3,0:3:9.03:0,9,193	./.	0/0:2,0:2:3:0,3,27	0/0:3,0:3:9.03:0,9,179	0/0:3,0:3:3:0,3,25	0/0:15,0:15:42.11:0,42,782	1/1:1,17:18:36.12:557,36,0	0/0:5,0:5:6.02:0,6,129	0/0:3,0:3:6.01:0,6,89	0/0:2,0:2:3:0,3,25	./.	0/0:5,0:5:6.02:0,6,128	0/0:1,0:1:3.01:0,3,49	0/0:8,0:8:15.05:0,15,301	0/0:8,0:8:18.05:0,18,327	0/0:8,0:8:21.07:0,21,437	0/0:10,0:10:30.10:0,30,644
chr10	99678936	.	ATAT	A	346.35	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.746;DP=566;FS=0.000;HRun=0;HaplotypeScore=74.1383;InbreedingCoeff=0.9940;MQ=75.89;MQ0=0;MQRankSum=5.043;QD=38.48;ReadPosRankSum=-1.441;VQSLOD=3.9698;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.20:0,57,1273	0/0:10,0:10:30.10:0,30,670	1/1:1,8:9:27.09:440,27,0	0/0:14,0:14:36.12:0,36,769	0/0:29,0:29:81.28:0,81,1803	0/0:17,0:17:51.14:0,51,1053	0/0:17,0:17:48.16:0,48,1052	0/0:40,0:40:99:0,111,2259	0/0:13,0:13:39.10:0,39,753	0/0:35,0:35:99:0,105,2345	0/0:20,0:20:57.20:0,57,1271	0/0:13,0:13:36.12:0,36,804	0/0:21,0:21:63.22:0,63,1404	0/0:22,0:22:63.22:0,63,1389	0/0:20,0:20:57.18:0,57,1214	0/0:25,0:25:75.26:0,75,1675	0/0:21,0:21:60.21:0,60,1305	0/0:20,0:20:60.21:0,60,1331	0/0:24,0:24:72.25:0,72,1593	0/0:25,0:25:72.22:0,72,1471	0/0:21,0:21:63.20:0,63,1318	0/0:16,0:16:45.15:0,45,1005	0/0:21,0:21:63.22:0,63,1353	0/0:8,0:8:21.07:0,21,446	0/0:22,0:22:63.22:0,63,1386	0/0:25,0:25:75.26:0,75,1658	0/0:26,0:26:75.26:0,75,1653	0/0:13,0:13:36.12:0,36,744
chr10	99681128	.	GA	G	479.43	PASS	AB=0.947;AC=5;AF=0.089;AN=56;BaseQRankSum=7.301;DP=465;FS=1.601;HRun=10;HaplotypeScore=47.3034;InbreedingCoeff=0.7325;MQ=76.15;MQ0=0;MQRankSum=-0.482;QD=10.65;ReadPosRankSum=0.401;VQSLOD=2.2320;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:27.07:0,27,299	0/0:4,0:4:12.03:0,12,133	0/0:7,0:7:8.72:0,9,63	0/1:16,1:16:4.10:4,0,201	0/0:27,0:27:72.19:0,72,796	0/0:14,0:14:42.11:0,42,465	0/0:7,0:7:21.06:0,21,232	0/0:38,0:38:90.22:0,90,975	1/1:2,12:14:35.98:313,36,0	0/0:19,0:19:48.12:0,48,525	0/0:25,0:25:69.17:0,69,753	0/0:17,0:17:45.12:0,45,498	0/0:17,0:17:48.13:0,48,530	0/0:14,0:14:36.10:0,36,398	0/0:19,0:19:57.15:0,57,624	0/0:13,0:13:36.10:0,36,398	0/0:21,0:21:54.12:0,54,586	1/1:2,11:13:32.99:287,33,0	0/0:22,0:22:54.14:0,54,590	0/0:15,2:19:4.71:0,5,474	0/0:10,0:10:24.06:0,24,266	0/0:15,0:15:42.11:0,42,465	0/0:17,0:17:42.11:0,42,465	0/0:3,0:3:9.02:0,9,100	0/0:15,0:15:39.11:0,39,431	0/0:23,0:23:53.47:0,53,544	0/0:33,0:32:93.23:0,93,1008	0/0:11,0:11:27.07:0,27,299
chr10	99682254	.	G	GT	6028.96	PASS	AB=0.817;AC=24;AF=0.429;AN=56;BaseQRankSum=-7.975;DP=575;FS=0.340;HRun=10;HaplotypeScore=59.6908;InbreedingCoeff=0.8638;MQ=67.12;MQ0=1;MQRankSum=0.187;QD=22.41;ReadPosRankSum=-0.629;VQSLOD=5.3936;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,11:18:25.83:353,0,26	0/0:13,0:14:34.99:0,35,277	0/0:6,0:6:8.20:0,8,56	0/1:4,0:5:0.53:9,0,1	0/0:33,1:34:57.01:0,57,676	1/1:8,17:25:59.72:603,60,0	0/0:15,1:16:38.93:0,39,318	1/1:11,16:27:48.09:496,48,0	1/1:3,9:12:27.07:288,27,0	0/0:31,0:31:62.85:0,63,512	0/0:25,0:25:65.89:0,66,536	0/0:17,0:17:38.92:0,39,317	0/0:14,0:14:38.95:0,39,319	0/0:15,0:15:32.93:0,33,271	0/0:22,0:24:44.57:0,45,435	0/0:19,0:19:44.93:0,45,369	1/1:10,17:26:60.11:618,60,0	1/1:1,15:16:36.09:384,36,0	1/1:11,10:20:42.09:439,42,0	1/1:18,30:47:83.53:1039,84,0	1/1:6,8:14:33.08:345,33,0	0/0:14,1:15:5.78:0,6,244	0/0:27,0:28:70.89:0,71,569	0/0:18,0:18:21.60:0,22,321	0/0:29,0:30:73.91:0,74,595	1/1:10,17:27:57.13:601,57,0	1/1:2,21:23:66.14:692,66,0	1/1:0,5:5:15.04:160,15,0
chr10	99682331	.	TAA	T	7354.98	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=10.476;DP=597;FS=9.795;HRun=10;HaplotypeScore=81.6716;InbreedingCoeff=0.9903;MQ=65.99;MQ0=1;MQRankSum=-2.868;QD=27.65;ReadPosRankSum=1.518;VQSLOD=4.2610;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:29:63.16:702,63,0	0/0:10,0:11:29.59:0,30,437	0/0:12,0:12:16.46:0,16,236	0/0:9,0:9:10.75:0,11,95	0/0:26,0:26:69.24:0,69,1095	1/1:2,26:28:78.18:858,78,0	0/0:14,0:14:42.14:0,42,665	1/1:4,30:34:90.22:994,90,0	0/0:0,0:19:44.92:0,45,154	0/0:35,0:35:99:0,99,1568	0/0:24,0:25:65.71:0,66,991	0/0:15,0:15:39.12:0,39,595	0/0:12,0:12:36.11:0,36,551	0/0:14,0:14:39.13:0,39,618	0/0:18,0:18:48.16:0,48,761	0/0:24,0:24:66.23:0,66,1045	1/1:3,23:25:69.18:769,69,0	0/0:0,0:8:19.96:0,20,69	1/1:4,13:16:36.09:401,36,0	1/1:2,32:34:96.26:1070,96,0	1/1:2,16:18:42.11:468,42,0	0/0:20,0:20:60.20:0,60,952	0/0:25,0:25:72.25:0,72,1140	0/0:14,0:14:39.13:0,39,619	0/0:28,0:29:77.75:0,78,1199	1/1:5,20:25:18.55:655,19,0	1/1:4,22:26:63.16:702,63,0	1/1:3,25:28:66.18:736,66,0
chr10	99682505	.	TCA	T	2291.59	PASS	AB=0.835;AC=10;AF=0.179;AN=56;BaseQRankSum=10.107;DP=990;FS=15.309;HRun=0;HaplotypeScore=134.1850;InbreedingCoeff=0.0481;MQ=56.21;MQ0=39;MQRankSum=0.604;QD=8.55;ReadPosRankSum=2.310;VQSLOD=2.3695;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,3:31:99:147,0,793	0/0:13,0:13:39.12:0,39,631	0/0:62,0:6:6.02:0,6,101	0/1:71,0:8:6.27:14,0,6	0/0:21,0:21:63.19:0,63,1022	0/0:42,0:38:8.37:0,8,1213	0/0:27,0:27:72.19:0,72,1107	0/0:43,4:39:45.95:0,46,1252	1/1:7,41:48:88.35:1364,88,0	0/0:39,0:38:99:0,102,1685	0/0:19,0:19:48.11:0,48,728	0/0:36,0:36:99:0,99,1648	0/0:39,0:39:99:0,102,1700	0/0:38,0:38:99:0,108,1745	0/0:54,0:54:99:0,147,2380	0/0:51,1:52:89.59:0,90,2001	0/0:21,0:19:48.15:0,48,776	0/1:8,22:30:99:531,0,200	0/1:15,3:14:85.69:86,0,293	0/1:16,5:20:99:100,0,607	0/0:57,5:52:58.13:0,58,1462	0/0:29,0:29:74.16:0,74,1139	0/0:36,0:36:90.13:0,90,1428	0/0:48,1:48:87.65:0,88,2052	0/0:35,0:35:96.33:0,96,1608	0/1:19,4:22:99:100,0,629	0/1:17,3:18:73.60:74,0,497	0/1:3,1:4:26.55:27,0,138
chr10	99682545	.	A	AAC	4379.77	PASS	AB=0.706;AC=18;AF=0.321;AN=56;BaseQRankSum=7.632;DP=975;FS=6.601;HRun=0;HaplotypeScore=162.3786;InbreedingCoeff=0.7929;MQ=56.85;MQ0=22;MQRankSum=-10.767;QD=19.47;ReadPosRankSum=-3.336;VQSLOD=3.9050;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,13:25:41.11:546,41,0	0/0:21,0:21:60.19:0,60,768	0/0:75,0:24:49.57:0,50,534	0/0:73,0:20:38.81:0,39,441	0/0:24,0:24:60.18:0,60,764	1/1:14,15:25:16.30:252,16,0	0/0:28,0:28:60.14:0,60,745	1/1:11,35:35:84.26:1370,84,0	0/0:59,0:60:99:0,111,1704	0/0:42,0:42:99:0,114,1482	0/0:17,0:17:39.12:0,39,493	0/0:41,0:41:99:0,111,1391	0/0:56,0:56:99:0,156,1958	0/0:42,0:42:99:0,108,1389	0/0:52,0:52:99:0,132,1691	0/0:50,0:50:99:0,117,1506	0/1:11,7:16:14.94:309,0,15	0/0:32,0:32:42.61:0,43,789	1/1:12,3:14:8.12:151,8,0	1/1:8,3:10:12.04:199,12,0	1/1:28,12:32:36.01:534,36,0	0/0:21,0:21:48.11:0,48,591	0/0:33,0:33:84.25:0,84,1073	0/0:41,0:40:99:0,102,1260	0/0:41,0:41:99:0,105,1347	0/1:10,8:17:11.93:367,0,12	1/1:5,13:17:39.13:650,39,0	1/1:3,0:3:0.89:2,1,0
chr10	99682559	.	TCA	T	1667.58	PASS	AB=0.795;AC=13;AF=0.232;AN=56;BaseQRankSum=12.974;DP=853;FS=13.290;HRun=0;HaplotypeScore=145.1697;InbreedingCoeff=0.2326;MQ=57.37;MQ0=35;MQRankSum=-11.983;QD=10.05;ReadPosRankSum=-1.351;VQSLOD=2.0223;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:59.25:301,0,59	0/0:21,0:21:63.18:0,63,1028	0/0:68,0:21:24.24:0,24,296	0/1:59,0:18:3.99:4,0,197	0/0:22,0:22:63.22:0,63,1052	0/1:18,0:16:99:153,0,266	0/0:30,0:30:75.26:0,75,1238	0/0:23,0:15:2.80:0,3,13	0/0:57,1:58:99:0,145,2635	0/0:42,0:41:99:0,117,1920	0/0:14,0:14:42.14:0,42,685	0/0:41,0:41:99:0,117,1931	0/0:57,0:57:99:0,152,2452	0/0:41,0:41:99:0,117,1938	0/0:52,0:52:99:0,151,2512	0/0:51,0:51:99:0,141,2359	0/1:7,5:10:75.78:201,0,76	0/0:35,0:35:78.93:0,79,1201	0/1:4,3:5:51.28:101,0,51	1/1:2,2:4:5.97:57,6,0	0/1:6,15:19:10.32:265,0,10	0/0:23,0:23:60.19:0,60,937	0/0:32,0:32:93.32:0,93,1550	0/0:38,0:37:96.25:0,96,1490	0/0:37,0:37:99:0,108,1706	0/1:3,8:10:23.44:279,0,23	1/1:3,12:13:36.11:450,36,0	1/1:1,0:1:2.80:13,3,0
chr10	99682589	.	C	CA	366.81	PASS	AB=0.766;AC=9;AF=0.161;AN=56;BaseQRankSum=8.322;DP=894;FS=6.952;HRun=0;HaplotypeScore=136.4661;InbreedingCoeff=0.4819;MQ=55.03;MQ0=47;MQRankSum=-5.219;QD=3.94;ReadPosRankSum=-4.889;VQSLOD=1.8805;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.88:0,55,719	0/0:17,0:17:51.16:0,51,697	0/0:52,0:12:35.94:0,36,425	0/0:46,0:12:8.39:0,8,220	0/0:27,0:27:78.26:0,78,1088	0/0:20,0:18:52.93:0,53,675	0/0:34,0:34:90.30:0,90,1258	1/1:7,4:1:2.37:8,2,0	0/0:79,0:79:99:0,232,3175	0/0:43,0:42:99:0,123,1696	0/0:17,0:17:51.17:0,51,699	0/0:48,0:48:99:0,141,1931	0/0:57,0:57:99:0,169,2317	0/0:44,0:44:99:0,132,1813	0/0:59,0:59:99:0,178,2466	0/0:57,0:57:99:0,163,2257	0/0:13,0:12:36.12:0,36,498	0/0:45,0:43:99:0,125,1620	0/1:7,2:6:31.54:32,0,35	1/1:1,14:15:18.16:275,18,0	0/1:24,12:28:64.64:65,0,184	0/0:18,0:18:51.17:0,51,710	0/0:29,0:29:87.29:0,87,1215	0/0:35,0:35:99:0,105,1428	0/0:35,0:35:99:0,105,1447	0/0:5,0:5:14.78:0,15,95	0/1:12,7:17:82.06:82,0,154	1/1:1,2:3:5.98:45,6,0
chr10	99682590	.	C	CA	721.12	PASS	AB=0.845;AC=10;AF=0.179;AN=56;BaseQRankSum=8.669;DP=923;FS=17.591;HRun=0;HaplotypeScore=139.1798;InbreedingCoeff=0.4626;MQ=55.24;MQ0=47;MQRankSum=-7.402;QD=6.16;ReadPosRankSum=-5.294;VQSLOD=1.1507;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.89:0,55,719	0/0:17,0:17:51.16:0,51,688	0/0:51,0:12:35.79:0,36,405	0/0:47,0:14:19.95:0,20,249	0/0:27,0:27:81.26:0,81,1110	0/0:20,0:18:52.94:0,53,680	0/0:35,0:35:96.29:0,96,1304	1/1:13,4:3:6.01:57,6,0	0/0:79,0:79:99:0,232,3173	0/0:44,0:43:99:0,126,1715	0/0:19,0:19:47.33:0,47,694	0/0:48,0:48:99:0,141,1924	0/0:60,0:60:99:0,166,2289	0/0:45,0:45:99:0,132,1814	0/0:60,0:60:99:0,178,2440	0/0:56,0:56:99:0,166,2282	0/0:14,0:13:36.12:0,36,496	0/0:45,0:43:99:0,105,1556	0/1:10,2:8:18.99:83,0,19	1/1:2,14:16:27.52:333,28,0	0/1:27,12:30:99:137,0,182	0/0:18,0:18:51.17:0,51,713	0/0:31,0:31:87.28:0,87,1193	0/0:33,0:33:99:0,99,1378	0/0:35,0:35:99:0,102,1419	0/1:8,0:8:40.11:40,0,74	0/1:15,7:20:99:153,0,151	1/1:1,2:3:8.97:70,9,0
chr10	99682648	.	TCA	T	1543.11	PASS	AB=0.864;AC=8;AF=0.154;AN=52;BaseQRankSum=10.577;DP=1117;FS=17.300;HRun=0;HaplotypeScore=196.9473;InbreedingCoeff=-0.1832;MQ=50.16;MQ0=103;MQRankSum=-4.807;QD=5.18;ReadPosRankSum=-5.665;VQSLOD=-0.3451;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:53,1:53:99:276,0,1183	0/0:17,0:17:48.16:0,48,779	./.	./.	0/0:33,1:31:75.25:0,75,1235	0/1:22,0:19:99:103,0,564	0/0:32,0:24:57.19:0,57,934	0/0:34,0:13:27.07:0,27,412	0/0:65,1:64:99:0,130,2581	0/0:58,0:52:99:0,150,2439	0/0:24,0:22:50.63:0,51,1025	0/0:40,0:39:99:0,108,1755	0/0:53,0:53:99:0,153,2479	0/0:51,0:51:99:0,138,2289	0/0:63,0:62:99:0,163,2691	0/0:69,0:69:99:0,175,2851	0/1:21,4:24:49.52:50,0,874	0/0:36,0:31:90.31:0,90,1447	0/0:18,0:11:12.04:0,12,202	0/1:40,13:52:99:369,0,1307	0/1:55,13:54:99:228,0,1410	0/0:30,0:28:75.22:0,75,1199	0/0:26,0:25:57.19:0,57,951	0/0:47,0:45:99:0,120,1993	0/0:35,0:32:84.29:0,84,1407	0/1:29,8:35:99:232,0,717	0/1:20,12:30:99:398,0,645	0/1:6,1:7:20.52:21,0,224
chr10	99682688	.	A	AAC	1714.65	PASS	AB=0.846;AC=7;AF=0.125;AN=56;BaseQRankSum=-2.500;DP=1160;FS=5.984;HRun=0;HaplotypeScore=210.7901;InbreedingCoeff=0.1543;MQ=54.98;MQ0=30;MQRankSum=0.955;QD=7.62;ReadPosRankSum=-0.385;VQSLOD=2.8284;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:43,17:59:99:241,0,929	0/0:19,0:18:48.15:0,48,603	0/0:32,0:12:29.76:0,30,327	0/0:47,0:14:23.65:0,24,247	0/0:28,0:27:66.21:0,66,835	0/1:25,5:28:99:132,0,631	0/0:40,0:35:96.25:0,96,1185	0/0:52,0:45:82.45:0,82,1457	1/1:13,14:25:12.25:702,12,0	0/0:51,0:50:99:0,120,1489	0/0:24,0:21:54.16:0,54,674	0/0:44,0:43:99:0,105,1296	0/0:58,0:58:99:0,147,1843	0/0:55,0:55:99:0,150,1879	0/0:61,0:60:99:0,150,1838	0/0:63,1:64:99:0,106,1882	0/1:32,4:35:99:222,0,612	0/1:10,8:14:17.49:278,0,17	0/0:31,0:29:78.24:0,78,978	0/0:62,0:61:99:0,165,2018	0/0:74,0:67:99:0,148,1777	0/0:28,0:28:69.22:0,69,877	0/0:30,0:28:57.26:0,57,885	0/0:50,0:49:99:0,135,1716	0/0:35,0:32:80.95:0,81,961	0/1:54,0:51:99:274,0,1055	0/0:32,0:31:84.26:0,84,1056	0/0:15,0:15:3.46:0,3,392
chr10	99682748	.	A	AAC	1968.14	PASS	AB=0.799;AC=6;AF=0.107;AN=56;BaseQRankSum=9.462;DP=1153;FS=4.759;HRun=0;HaplotypeScore=148.4480;InbreedingCoeff=-0.1250;MQ=51.63;MQ0=102;MQRankSum=-3.612;QD=6.95;ReadPosRankSum=-0.338;VQSLOD=2.6846;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:86.67:0,87,1107	0/0:18,0:18:47.96:0,48,570	0/0:46,0:4:5.97:0,6,56	0/0:56,0:8:17.34:0,17,165	0/0:27,0:25:60.19:0,60,764	0/0:32,0:32:87.16:0,87,1039	0/0:42,0:27:53.91:0,54,660	0/1:52,10:49:99:169,0,923	0/0:31,0:31:84.18:0,84,1010	0/0:51,0:43:99:0,108,1346	0/0:22,0:21:51.15:0,51,635	0/0:51,0:50:99:0,135,1704	0/0:59,0:59:99:0,162,2019	0/0:53,0:53:99:0,141,1761	0/0:58,0:58:99:0,141,1757	0/0:59,0:59:99:0,150,1893	0/0:32,0:32:71.24:0,71,865	0/0:22,0:20:60.11:0,60,753	0/1:21,7:23:99:219,0,377	0/1:38,8:46:99:326,0,979	0/1:70,17:81:99:583,0,1528	0/0:25,0:24:66.20:0,66,826	0/0:23,0:21:45.14:0,45,571	0/0:46,0:45:99:0,106,1495	0/0:26,0:25:75.21:0,75,925	0/0:44,1:43:43.08:0,43,1082	0/1:26,11:36:99:314,0,631	0/1:12,11:23:99:482,0,389
chr10	99684681	.	AT	A	300.13	PASS	AB=0.955;AC=6;AF=0.333;AN=18;BaseQRankSum=-1.561;DP=89;FS=0.000;HRun=2;HaplotypeScore=20.1498;MQ=54.60;MQ0=11;MQRankSum=1.480;QD=5.27;ReadPosRankSum=-1.277;VQSLOD=0.0374;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:2.87:0,3,15	./.	0/0:11,0:5:5.02:0,5,27	0/1:37,0:8:12.07:12,0,43	./.	./.	./.	1/1:8,0:8:24.07:292,24,0	./.	0/0:3,0:3:9.03:0,9,119	./.	./.	./.	./.	0/0:1,0:1:3:0,3,25	./.	0/1:9,1:9:51.20:51,0,190	0/0:7,0:7:11.57:0,12,65	1/1:1,1:1:3.01:38,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	99684682	.	T	TA	315.65	PASS	AB=0.955;AC=6;AF=0.333;AN=18;BaseQRankSum=-1.501;DP=95;FS=1.419;HRun=1;HaplotypeScore=19.0828;MQ=53.88;MQ0=11;MQRankSum=1.261;QD=5.54;ReadPosRankSum=-1.181;VQSLOD=0.0723;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:2.87:0,3,15	./.	0/0:11,0:5:4.98:0,5,25	0/1:37,0:8:4.20:4,0,44	./.	./.	./.	1/1:0,8:8:24.08:312,24,0	./.	0/0:3,0:3:9.03:0,9,120	./.	./.	./.	./.	0/0:2,0:2:3:0,3,25	./.	0/1:9,1:9:52.15:52,0,195	0/0:8,0:8:6.20:0,6,45	1/1:1,1:1:3.01:38,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	99687207	.	TG	T	1848.64	PASS	AB=0.757;AC=45;AF=0.938;AN=48;BaseQRankSum=-3.568;DP=171;FS=3.530;HRun=1;HaplotypeScore=47.4433;InbreedingCoeff=0.1151;MQ=66.07;MQ0=2;MQRankSum=-1.416;QD=10.87;ReadPosRankSum=1.350;VQSLOD=1.8032;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,8:12:18.04:210,18,0	./.	0/1:6,1:3:3.56:4,0,18	0/1:19,0:9:2.05:2,0,73	1/1:2,7:9:8.82:114,9,0	1/1:3,4:6:3.48:37,3,0	1/1:1,10:11:14.68:177,15,0	./.	1/1:0,3:3:3.01:38,3,0	1/1:0,9:9:24:266,24,0	1/1:1,4:5:2.80:37,3,0	1/1:1,12:13:17.27:189,17,0	1/1:0,2:2:3.01:37,3,0	1/1:0,6:5:8.77:104,9,0	./.	1/1:0,8:8:3.01:36,3,0	1/1:0,2:2:3.48:39,3,0	1/1:1,2:3:8.96:89,9,0	1/1:1,3:4:12.04:158,12,0	1/1:1,1:2:3.01:32,3,0	1/1:3,12:15:2.89:31,3,0	1/1:0,5:4:3.01:36,3,0	1/1:0,7:7:6.01:61,6,0	0/1:0,4:4:0:0,0,0	1/1:0,5:5:6.02:71,6,0	1/1:0,6:5:14.97:156,15,0	1/1:1,1:2:2.99:23,3,0	./.
chr10	99687230	.	CCT	C	2970.42	PASS	AC=24;AF=0.444;AN=54;BaseQRankSum=3.060;DP=396;FS=2.935;HRun=0;HaplotypeScore=89.8103;InbreedingCoeff=0.8519;MQ=57.07;MQ0=3;MQRankSum=0.241;QD=20.35;ReadPosRankSum=1.218;VQSLOD=3.5568;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:24:32.61:571,33,0	./.	0/0:37,0:9:3.96:0,4,125	0/0:42,0:21:21.34:0,21,352	0/0:15,0:14:20.76:0,21,350	1/1:5,8:14:0.30:170,0,0	0/0:22,0:22:1.07:0,1,528	1/1:4,8:10:24.03:282,24,0	1/1:2,9:11:12.02:152,12,0	0/0:15,0:15:42.14:0,42,687	0/0:11,0:11:26.94:0,27,450	0/0:18,1:19:15.12:0,15,400	0/0:8,0:8:21.96:0,22,342	0/0:15,0:15:29.86:0,30,490	0/0:6,0:6:12.23:0,12,196	0/0:13,0:14:26.83:0,27,349	1/1:1,5:6:9.03:115,9,0	1/1:0,6:6:18.06:229,18,0	1/1:4,5:9:11.16:183,11,0	1/1:1,5:6:15.05:191,15,0	1/1:7,20:28:34.33:423,34,0	0/0:15,0:13:27.09:0,27,451	0/0:11,1:12:24.08:0,24,399	0/0:8,0:8:5.81:0,6,88	0/0:10,0:10:21.03:0,21,309	1/1:2,16:17:45.13:558,45,0	1/1:1,6:7:15.05:188,15,0	1/1:0,3:3:9.03:115,9,0
chr10	99688080	.	GAC	G	1485.34	PASS	AB=0.989;AC=19;AF=0.339;AN=56;BaseQRankSum=11.694;DP=454;FS=31.720;HRun=0;HaplotypeScore=97.4484;InbreedingCoeff=0.5786;MQ=82.66;MQ0=0;MQRankSum=-0.861;QD=6.54;ReadPosRankSum=8.742;VQSLOD=1.1112;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:31,1:32:21.67:274,22,0	0/0:7,0:7:21:0,21,223	0/0:15,0:14:34.73:0,35,525	0/0:20,0:20:39.01:0,39,580	0/0:11,0:11:26.97:0,27,311	1/1:30,3:33:4.51:311,5,0	0/0:20,0:20:51.56:0,52,789	0/1:23,0:23:47.48:47,0,143	0/1:19,0:19:8.97:108,0,9	0/0:4,0:4:12.03:0,12,172	0/0:10,0:10:15.29:0,15,247	0/0:24,0:24:66.17:0,66,1080	0/0:22,0:22:66.03:0,66,863	0/0:12,0:12:36.10:0,36,542	0/0:12,0:12:36.09:0,36,619	0/0:19,0:19:57.04:0,57,853	1/1:10,0:10:22.47:88,22,0	1/1:18,0:18:39.07:153,39,0	0/1:17,1:18:41.96:112,0,42	1/1:10,2:12:14.90:130,15,0	1/1:14,1:15:14.96:146,15,0	0/0:7,0:7:18.04:0,18,270	0/0:14,0:14:39.43:0,39,403	0/0:11,0:11:30.03:0,30,495	0/0:18,0:19:56.02:0,56,677	0/1:15,0:15:31.19:88,0,31	1/1:24,0:23:13.69:197,14,0	0/1:8,0:8:9.76:29,0,10
chr10	99688081	.	ACC	A	5899.10	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=1.281;DP=448;FS=41.964;HRun=10;HaplotypeScore=83.0475;InbreedingCoeff=0.9139;MQ=82.81;MQ0=0;MQRankSum=-0.007;QD=24.68;ReadPosRankSum=6.072;VQSLOD=1.5251;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,29:32:75.20:835,75,0	0/0:7,0:7:14.20:0,14,89	0/1:15,0:14:6.20:6,0,275	0/0:20,0:20:17.51:0,18,363	0/0:7,0:10:22.09:0,22,176	1/1:6,27:33:81.21:897,81,0	0/0:22,0:22:42.88:0,43,491	1/1:8,15:23:39.01:404,39,0	1/1:2,17:19:39.10:435,39,0	0/0:4,0:4:6.02:0,6,80	0/0:7,0:9:16.57:0,17,181	0/0:21,0:22:64.94:0,65,665	0/0:22,0:22:39.05:0,39,449	0/0:12,0:12:31.27:0,31,316	0/0:11,0:12:35.53:0,36,404	0/0:19,0:21:49.97:0,50,542	1/1:0,10:10:27.07:301,27,0	1/1:0,18:18:48.13:535,48,0	1/1:4,14:18:42.07:449,42,0	1/1:2,10:12:30.07:332,30,0	1/1:1,13:14:42.11:468,42,0	0/0:7,0:7:15.03:0,15,187	0/0:11,0:12:21.16:0,21,214	0/0:10,0:11:26.57:0,27,341	0/0:17,0:18:37.13:0,37,362	1/1:2,12:14:33.07:367,33,0	1/1:1,22:23:66.18:736,66,0	1/1:1,7:8:12.03:134,12,0
chr10	99689035	.	A	ACAC	506.83	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=0.382;DP=358;FS=0.000;HRun=0;HaplotypeScore=55.7142;InbreedingCoeff=0.4148;MQ=79.62;MQ0=14;MQRankSum=-0.808;QD=6.26;ReadPosRankSum=-1.453;VQSLOD=1.6112;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,2:19:12.49:200,12,0	0/0:4,0:4:9.02:0,9,107	0/1:38,0:21:2.43:2,0,36	0/0:41,0:17:3.01:0,3,41	0/0:6,0:6:9.03:0,9,118	1/1:3,6:11:15.05:295,15,0	0/0:11,0:11:24.06:0,24,309	0/0:12,0:12:2.91:0,3,20	0/1:6,0:5:1.15:111,0,1	0/0:8,0:8:12.03:0,12,151	0/0:5,0:5:9.02:0,9,107	0/0:16,0:16:33.11:0,33,450	0/0:10,0:10:24.07:0,24,310	0/0:16,0:16:15.05:0,15,204	0/0:5,0:5:5.16:0,5,80	0/0:10,0:10:12.04:0,12,159	0/0:14,0:15:36.07:0,36,454	0/1:7,0:7:19.23:29,0,19	0/0:12,0:11:6.02:0,6,82	0/0:16,0:16:18.05:0,18,229	0/0:22,0:22:33.05:0,33,397	0/0:11,0:11:18.06:0,18,245	0/0:4,0:4:9.03:0,9,123	0/0:16,0:16:26.95:0,27,342	0/0:8,0:8:6.02:0,6,82	0/0:21,0:21:27.09:0,27,368	0/0:5,0:5:6.02:0,6,82	0/0:3,0:3:9.03:0,9,114
chr10	99689773	.	T	TG	122.44	PASS	AB=0.750;AC=7;AF=0.152;AN=46;BaseQRankSum=4.167;DP=606;FS=6.590;HRun=0;HaplotypeScore=59.9045;InbreedingCoeff=0.6781;MQ=55.95;MQ0=61;MQRankSum=1.800;QD=10.20;ReadPosRankSum=-3.822;VQSLOD=2.2582;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,175,2373	0/0:15,0:15:45.15:0,45,622	./.	./.	0/0:21,0:21:63.19:0,63,862	0/0:15,0:15:45.15:0,45,629	0/0:45,0:41:99:0,120,1660	./.	0/0:19,0:19:57.19:0,57,797	0/0:21,0:19:57.19:0,57,797	0/0:15,0:15:45.15:0,45,629	0/0:28,0:28:84.28:0,84,1175	0/0:21,0:20:57.19:0,57,796	0/0:35,0:35:99:0,102,1424	0/0:42,0:42:99:0,126,1709	0/0:30,0:30:90.30:0,90,1259	0/0:46,0:46:99:0,138,1893	0/0:21,0:21:63.21:0,63,881	./.	1/1:0,3:3:6.02:87,6,0	1/1:4,0:4:5.89:77,6,0	0/0:23,0:20:57.19:0,57,797	0/0:17,0:17:51.17:0,51,713	0/0:42,0:42:99:0,126,1721	0/0:15,0:15:45.15:0,45,628	0/1:2,1:3:33.23:33,0,42	1/1:1,1:2:2.95:44,3,0	./.
chr10	99690953	.	TG	T	891.81	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.371;DP=584;FS=0.000;HRun=8;HaplotypeScore=76.7711;InbreedingCoeff=0.9111;MQ=92.10;MQ0=0;MQRankSum=-3.969;QD=22.30;ReadPosRankSum=1.321;VQSLOD=4.0247;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:30:46.79:0,47,263	0/0:14,0:14:42.13:0,42,507	0/0:30,0:30:49.77:0,50,817	0/0:18,0:18:13.55:0,14,360	0/0:27,0:27:75.22:0,75,891	0/0:5,0:21:33.43:0,33,226	0/0:14,0:14:36.09:0,36,422	0/0:7,0:20:24.33:0,24,130	1/1:1,25:26:69.11:666,69,0	0/0:26,0:26:54.05:0,54,619	0/0:18,0:18:51.14:0,51,605	0/0:25,0:25:75.19:0,75,866	0/0:16,0:16:45.14:0,45,543	0/0:20,0:20:57.16:0,57,677	0/0:30,0:30:81.25:0,81,978	0/0:27,0:27:72.21:0,72,850	0/0:3,0:18:34.50:0,35,175	1/1:1,13:14:36.06:347,36,0	0/0:3,0:13:5.13:0,5,106	0/0:3,0:24:34.66:0,35,191	0/0:6,0:16:28.80:0,29,155	0/0:20,1:21:31.20:0,31,649	0/0:20,0:20:54.14:0,54,620	0/0:23,0:23:63.13:0,63,711	0/0:19,0:18:48.13:0,48,568	0/0:4,0:15:21.93:0,22,115	0/0:6,0:33:57.37:0,57,298	0/0:0,0:6:11.50:0,12,58
chr10	99691913	.	G	GA	822.24	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.406;DP=632;FS=3.931;HRun=4;HaplotypeScore=57.5255;InbreedingCoeff=0.9990;MQ=82.66;MQ0=0;MQRankSum=-2.849;QD=26.52;ReadPosRankSum=-0.725;VQSLOD=2.2278;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:61.67:0,62,865	0/0:12,0:12:33.08:0,33,364	0/0:17,0:17:39.11:0,39,442	0/0:18,0:18:45.06:0,45,480	0/0:38,0:38:99:0,108,1206	0/0:25,0:25:75.20:0,75,840	0/0:28,0:28:81.22:0,81,909	0/0:32,0:32:90.24:0,90,1007	1/1:3,15:18:36.12:493,36,0	0/0:28,0:28:72.20:0,72,817	0/0:30,0:30:78.21:0,78,875	0/0:16,0:16:42.10:0,42,466	0/0:22,0:22:66.16:0,66,731	0/0:17,0:17:42.10:0,42,467	0/0:33,0:33:90.24:0,90,1010	0/0:19,0:19:54.15:0,54,612	0/0:19,0:19:54.15:0,54,611	1/1:2,11:13:33.11:451,33,0	0/0:24,0:24:69.18:0,69,766	0/0:31,0:31:90.26:0,90,1020	0/0:14,0:14:39.11:0,39,442	0/0:23,0:23:63.18:0,63,713	0/0:15,0:15:42.07:0,42,453	0/0:13,0:13:30.08:0,30,340	0/0:41,0:41:99:0,114,1286	0/0:20,0:20:57.13:0,57,618	0/0:28,0:28:75.21:0,75,849	0/0:10,0:10:30.09:0,30,340
chr10	99692407	.	AAG	A	570.40	PASS	AB=0.844;AC=20;AF=0.455;AN=44;BaseQRankSum=-2.594;DP=414;FS=19.233;HRun=0;HaplotypeScore=64.6892;InbreedingCoeff=0.4438;MQ=53.73;MQ0=33;MQRankSum=2.001;QD=3.48;ReadPosRankSum=1.392;VQSLOD=0.1544;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:34,0:10:0:0,0,0	0/0:16,0:15:2.96:0,3,45	0/0:11,0:11:3.68:0,4,33	1/1:15,0:15:6.01:64,6,0	0/0:28,0:26:10.19:0,10,89	1/1:11,0:9:7.79:35,8,0	1/1:13,3:17:8.85:79,9,0	./.	0/0:7,0:7:2.66:0,3,13	0/1:6,5:11:29.14:86,0,29	1/1:9,3:10:3.01:33,3,0	1/1:11,6:16:9.02:99,9,0	1/1:6,6:11:6.01:66,6,0	0/0:10,0:11:6.45:0,6,55	./.	0/0:17,0:16:5.71:0,6,32	0/0:18,0:18:14.41:0,14,101	0/0:15,0:14:17.93:0,18,144	1/1:11,6:16:6.01:66,6,0	./.	1/1:14,4:15:9.33:80,9,0	1/1:10,4:14:6.01:66,6,0	0/1:20,0:18:43.87:44,0,106	0/0:15,0:13:2.99:0,3,23	0/0:8,0:8:1.25:0,1,3
chr10	99692413	.	G	GAA	2476.45	PASS	AB=0.595;AC=19;AF=0.339;AN=56;BaseQRankSum=-2.470;DP=424;FS=2.272;HRun=1;HaplotypeScore=66.0509;InbreedingCoeff=0.7310;MQ=51.06;MQ0=43;MQRankSum=-0.579;QD=15.77;ReadPosRankSum=-3.725;VQSLOD=-0.4679;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:12:32.83:258,33,0	0/0:3,0:3:5.99:0,6,50	0/0:28,0:4:2.08:0,2,42	0/0:31,0:7:2.02:0,2,30	0/0:18,0:17:23.37:0,23,211	1/1:12,0:10:23.92:213,24,0	0/0:19,0:19:38.42:0,38,305	1/1:24,0:22:46.05:506,46,0	0/0:10,0:8:23.90:0,24,199	0/0:21,0:21:59.10:0,59,482	0/0:6,0:5:11.99:0,12,100	0/0:11,0:10:13.19:0,13,103	0/0:14,0:13:5.89:0,6,174	0/0:10,0:8:11.98:0,12,98	0/0:18,0:17:23.96:0,24,196	0/0:13,0:12:14.42:0,14,123	1/1:15,0:11:22.94:214,23,0	0/0:5,0:2:3:0,3,25	1/1:3,11:13:5.92:229,6,0	1/1:2,15:16:32.01:364,32,0	1/1:15,3:14:20.58:327,21,0	0/0:19,0:17:21.30:0,21,171	0/0:8,0:7:8.95:0,9,75	0/0:18,0:13:4:0,4,76	0/0:15,0:15:29.76:0,30,249	0/1:7,15:19:5.77:357,0,6	1/1:2,12:12:5.98:77,6,0	1/1:6,1:8:6.83:128,7,0
chr10	99692593	.	G	GAGAAAGAA	5276.80	PASS	AB=0.592;AC=13;AF=0.232;AN=56;BaseQRankSum=-7.866;DP=465;FS=5.292;HRun=0;HaplotypeScore=111.9307;InbreedingCoeff=0.8057;MQ=72.26;MQ0=4;MQRankSum=-4.672;QD=44.72;ReadPosRankSum=-4.300;VQSLOD=3.4829;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:9:30.06:0,30,692	0/0:11,0:11:24.07:0,24,533	0/0:32,0:17:11.90:0,12,198	0/0:39,0:19:0.99:0,1,296	0/0:18,0:18:45.14:0,45,1107	0/0:18,0:18:42.10:0,42,1001	0/0:11,0:11:24.06:0,24,505	1/1:18,0:18:24.08:593,24,0	0/0:7,0:7:12.04:0,12,309	0/0:18,0:18:51.18:0,51,1273	0/0:18,0:18:36.10:0,36,759	0/0:16,0:16:42.04:0,42,1066	0/0:14,0:14:39.11:0,39,906	0/0:12,0:10:24.08:0,24,584	0/0:11,0:11:33.10:0,33,774	0/0:16,0:14:35.91:0,36,928	0/0:21,0:21:30.52:0,31,1108	0/0:7,0:7:15.05:0,15,351	1/1:7,9:18:33.07:803,33,0	1/1:2,16:19:33.08:1036,33,0	1/1:4,10:14:6.02:185,6,0	0/0:15,0:14:35.77:0,36,929	0/0:15,0:15:36.12:0,36,872	0/0:14,0:13:36.12:0,36,873	0/0:21,0:21:51.17:0,51,1255	0/1:9,15:28:17.31:1786,0,17	1/1:4,4:10:9.03:374,9,0	1/1:1,7:8:12.04:500,12,0
chr10	99693325	.	AAGCCACTG	A	2071.07	PASS	AB=0.553;AC=3;AF=0.054;AN=56;BaseQRankSum=8.293;DP=647;FS=3.730;HRun=0;HaplotypeScore=159.6427;InbreedingCoeff=0.6366;MQ=92.53;MQ0=0;MQRankSum=-8.582;QD=55.97;ReadPosRankSum=1.357;VQSLOD=3.7108;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,4508	0/0:7,0:7:18.06:0,18,805	0/0:33,0:33:90.30:0,90,3860	0/0:26,0:26:66.23:0,66,2602	0/0:27,0:27:81.26:0,81,3474	0/0:20,0:20:60.19:0,60,2573	0/0:22,0:22:63.22:0,63,2751	0/0:27,0:27:78.22:0,78,3159	0/1:5,21:26:70.87:1658,0,71	0/0:26,0:26:78.26:0,78,3253	0/0:18,0:18:51.17:0,51,2160	0/0:26,0:26:78.27:0,78,3392	0/0:29,0:29:84.29:0,84,3702	0/0:24,0:24:69.24:0,69,2948	0/0:19,0:19:57.20:0,57,2536	0/0:27,0:27:78.27:0,78,3479	0/0:18,0:18:51.15:0,51,2158	1/1:3,8:11:18.06:517,18,0	0/0:15,0:15:42.12:0,42,1539	0/0:27,0:27:78.27:0,78,3299	0/0:48,0:48:99:0,144,6273	0/0:10,0:10:30.10:0,30,1333	0/0:21,0:21:63.22:0,63,2713	0/0:27,0:27:81.28:0,81,3489	0/0:29,0:29:84.27:0,84,3465	0/0:18,0:18:51.18:0,51,2262	0/0:18,0:18:54.19:0,54,2377	0/0:12,0:12:33.11:0,33,1456
chr10	99693433	.	AC	A	6633.40	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.371;DP=596;FS=1.026;HRun=3;HaplotypeScore=58.0321;InbreedingCoeff=0.9996;MQ=81.16;MQ0=0;MQRankSum=-1.293;QD=31.89;ReadPosRankSum=1.013;VQSLOD=4.7401;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:63.13:758,63,0	0/0:9,0:9:27.07:0,27,350	0/0:21,0:20:53.75:0,54,547	0/0:17,1:18:31.65:0,32,328	0/0:24,0:24:72.19:0,72,928	1/1:0,23:23:66.21:811,66,0	0/0:19,0:19:57.14:0,57,724	1/1:2,26:28:78.16:879,78,0	0/0:22,0:22:66.14:0,66,833	0/0:35,0:35:99:0,105,1345	0/0:17,0:17:51.17:0,51,687	0/0:25,0:25:75.21:0,75,971	0/0:27,0:27:81.17:0,81,1027	0/0:28,0:28:84.25:0,84,1106	0/0:27,0:27:72.34:0,72,981	0/0:22,0:22:66.18:0,66,849	1/1:0,14:14:33.10:407,33,0	0/0:12,0:12:36.08:0,36,452	1/1:0,15:15:44.30:485,44,0	1/1:0,22:22:65.90:705,66,0	1/1:1,15:16:36.11:442,36,0	0/0:17,0:17:51.12:0,51,644	0/0:19,0:19:54.18:0,54,726	0/0:19,0:19:57.16:0,57,741	0/0:27,0:27:75.19:0,75,930	1/1:0,27:27:78.19:920,78,0	1/1:3,22:25:72.15:856,72,0	1/1:0,12:12:30.09:369,30,0
chr10	99694244	.	TA	T	1517.34	PASS	AB=0.871;AC=20;AF=0.357;AN=56;BaseQRankSum=6.800;DP=504;FS=0.439;HRun=13;HaplotypeScore=69.8546;InbreedingCoeff=0.4432;MQ=67.94;MQ0=8;MQRankSum=-1.340;QD=6.60;ReadPosRankSum=0.744;VQSLOD=2.4230;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,1:14:2.12:0,2,177	0/1:9,1:10:17.82:18,0,150	0/0:23,0:9:2.58:0,3,84	0/1:29,1:14:10.24:10,0,36	0/1:27,5:32:24.53:25,0,433	1/1:2,8:10:23.86:175,24,0	0/0:11,1:12:8.14:0,8,241	0/1:13,6:19:18.92:140,0,19	0/0:10,1:26:41.31:0,41,334	0/0:27,0:27:51.07:0,51,490	0/0:23,0:24:53.92:0,54,510	0/0:13,1:14:5.13:0,5,212	0/0:11,1:13:4.29:0,4,230	0/0:14,0:14:32.76:0,33,289	0/1:22,4:26:1.01:1,0,435	0/0:15,0:15:27.02:0,27,255	0/0:13,1:15:19.98:0,20,336	0/0:5,0:18:39.93:0,40,213	1/1:9,9:18:32.78:241,33,0	1/1:4,15:18:44.74:328,45,0	1/1:0,3:3:2.98:22,3,0	0/0:20,0:20:45.95:0,46,434	0/0:15,1:16:20.04:0,20,335	0/1:5,1:6:9.89:10,0,76	0/0:22,1:22:35.13:0,35,490	1/1:5,5:11:19.90:137,20,0	1/1:11,23:35:73.55:531,74,0	1/1:8,3:11:8.90:66,9,0
chr10	99694282	.	GAA	G	2867.52	PASS	AB=0.548;AC=13;AF=0.232;AN=56;BaseQRankSum=9.113;DP=511;FS=0.000;HRun=9;HaplotypeScore=83.1966;InbreedingCoeff=0.8814;MQ=65.02;MQ0=9;MQRankSum=-6.978;QD=23.90;ReadPosRankSum=-0.686;VQSLOD=2.9753;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:15:25.60:0,26,97	0/0:9,0:9:24.08:0,24,386	0/0:31,0:13:32.52:0,33,481	0/0:38,0:13:20.30:0,20,234	0/0:28,0:28:66.22:0,66,1045	0/0:3,0:18:35.95:0,36,150	0/0:18,0:18:51.17:0,51,831	1/1:5,18:23:57.11:640,57,0	0/0:22,0:22:60.20:0,60,966	0/0:26,0:26:72.24:0,72,1157	0/0:22,0:22:54.16:0,54,859	0/0:11,0:11:33.06:0,33,479	0/0:17,0:17:48.13:0,48,756	0/0:12,0:12:33.10:0,33,518	0/0:25,0:25:60.12:0,60,890	0/0:12,0:12:33.10:0,33,508	0/0:6,0:14:31.76:0,32,167	0/0:11,0:11:30.10:0,30,492	1/1:5,13:17:42.10:488,42,0	1/1:4,17:19:45.12:516,45,0	1/1:1,3:4:9.02:103,9,0	0/0:18,0:18:54.18:0,54,883	0/0:19,0:19:45.15:0,45,722	0/0:3,0:3:6.02:0,6,98	0/0:21,0:20:51.17:0,51,837	0/1:3,14:16:7.13:410,0,7	1/1:8,23:31:63.15:722,63,0	1/1:0,6:6:15.04:175,15,0
chr10	99694584	.	A	AG	3040.24	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=-0.036;DP=386;FS=4.243;HRun=6;HaplotypeScore=55.5806;InbreedingCoeff=0.7187;MQ=61.58;MQ0=3;MQRankSum=-3.524;QD=16.17;ReadPosRankSum=-1.437;VQSLOD=3.0238;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:16:36.12:453,36,0	0/0:6,0:6:18.04:0,18,183	0/0:18,0:11:2.97:0,3,161	0/0:19,0:12:7.84:0,8,185	0/0:17,0:17:44.93:0,45,434	1/1:3,7:9:12.04:145,12,0	0/0:8,0:8:21.04:0,21,214	1/1:14,5:19:14.96:250,15,0	1/1:1,18:19:48.15:603,48,0	0/1:22,0:22:39.82:40,0,457	0/0:17,0:17:19.29:0,19,347	0/0:11,0:10:30.07:0,30,306	0/0:9,0:9:24.05:0,24,245	0/1:6,0:6:16.47:16,0,107	0/0:20,0:20:57.08:0,57,565	0/0:16,0:16:45.10:0,45,459	0/0:16,0:16:13.43:0,13,257	1/1:3,14:17:32.59:400,33,0	1/1:5,7:12:18.06:227,18,0	1/1:2,4:6:12.04:151,12,0	1/1:4,6:10:26.06:287,26,0	0/1:23,0:24:8.48:8,0,370	0/0:15,0:15:13.47:0,13,339	0/0:14,0:14:36.04:0,36,355	0/0:12,0:12:11.86:0,12,230	1/1:3,11:16:31.47:353,31,0	1/1:0,8:8:21.07:264,21,0	1/1:1,1:2:5.93:54,6,0
chr10	99694586	.	G	GA	1173.20	PASS	AB=0.944;AC=21;AF=0.375;AN=56;BaseQRankSum=11.747;DP=397;FS=1.460;HRun=0;HaplotypeScore=66.9154;InbreedingCoeff=0.3489;MQ=58.19;MQ0=4;MQRankSum=-4.182;QD=5.90;ReadPosRankSum=0.465;VQSLOD=3.3047;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:10.39:119,0,10	0/0:7,0:7:21.03:0,21,271	0/1:16,2:10:55.12:55,0,265	0/0:19,0:11:25.11:0,25,302	0/0:18,0:17:48.15:0,48,646	1/1:8,0:8:11.37:72,11,0	0/0:9,0:9:22.71:0,23,299	0/1:18,1:18:42.94:43,0,45	1/1:19,0:19:22.91:226,23,0	0/1:19,3:22:61.41:61,0,671	0/0:15,0:15:1.44:0,1,463	0/0:11,0:10:30.10:0,30,418	0/0:9,0:9:27.08:0,27,361	0/0:6,0:6:9.81:0,10,186	0/0:20,0:20:60.11:0,60,811	0/0:16,0:16:45.15:0,45,628	0/0:17,0:17:4.58:0,5,417	1/1:17,0:17:16.20:148,16,0	0/1:12,0:12:76.17:76,0,95	1/1:11,0:9:11.37:59,11,0	1/1:9,2:11:28.48:167,28,0	0/0:23,1:24:6.40:0,6,632	0/1:12,2:14:24.35:24,0,461	0/0:15,0:14:39.12:0,39,523	0/0:11,1:12:1.10:0,1,379	0/1:19,0:19:42.51:154,0,43	1/1:10,0:10:19.93:105,20,0	1/1:1,1:2:5.75:51,6,0
chr10	99694587	.	G	GA	1367.75	PASS	AB=0.953;AC=25;AF=0.446;AN=56;BaseQRankSum=11.626;DP=410;FS=0.923;HRun=0;HaplotypeScore=74.6832;InbreedingCoeff=0.1532;MQ=56.11;MQ0=4;MQRankSum=-3.857;QD=5.10;ReadPosRankSum=0.024;VQSLOD=2.8203;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:10.49:114,0,10	0/0:7,0:7:21.04:0,21,273	0/1:17,0:9:59.08:59,0,257	0/0:20,0:12:24.35:0,24,298	0/0:19,0:18:52.70:0,53,672	1/1:10,0:9:13.33:59,13,0	0/0:9,0:9:14.68:0,15,285	0/1:21,0:18:41.80:42,0,49	1/1:19,0:19:22.70:214,23,0	0/1:22,1:23:99:120,0,670	0/0:13,2:15:0.43:0,0,462	0/0:11,0:10:30.10:0,30,418	0/0:9,0:9:27.08:0,27,360	0/1:5,1:6:26.23:26,0,174	0/0:20,0:20:60.18:0,60,818	0/0:16,0:16:45.15:0,45,628	0/1:13,5:18:4.08:4,0,369	1/1:18,0:18:15.78:147,16,0	0/1:10,0:10:26.64:85,0,27	1/1:13,0:11:4.62:51,5,0	1/1:10,0:11:31.71:219,32,0	0/1:21,3:24:45.56:46,0,598	0/1:15,0:15:19.76:20,0,463	0/0:15,1:15:40.66:0,41,516	0/1:13,0:13:32.64:33,0,370	0/1:20,0:20:44.48:150,0,44	1/1:12,0:12:20.17:115,20,0	1/1:2,0:2:5.75:52,6,0
chr10	99694654	.	G	GAAGA	553.81	PASS	AB=0.927;AC=10;AF=0.179;AN=56;BaseQRankSum=4.919;DP=370;FS=19.719;HRun=0;HaplotypeScore=100.4063;InbreedingCoeff=-0.1080;MQ=45.95;MQ0=15;MQRankSum=-3.623;QD=5.83;ReadPosRankSum=-2.779;VQSLOD=0.2974;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,1:19:23.71:0,24,751	0/0:3,0:3:8.99:0,9,140	0/0:31,0:9:6.41:0,6,143	0/0:38,0:9:18.06:0,18,293	0/0:13,0:13:33.04:0,33,603	0/0:17,0:16:33.04:0,33,543	0/0:17,0:16:39.08:0,39,669	0/1:21,0:18:3.61:4,0,180	0/1:14,0:14:96.64:97,0,356	0/0:20,0:20:30.54:0,31,656	0/0:16,0:15:34.13:0,34,575	0/0:10,0:9:27.06:0,27,459	0/1:7,0:7:29.03:29,0,145	0/0:3,0:3:9.03:0,9,180	0/0:14,0:14:12.84:0,13,576	0/0:9,0:9:25.90:0,26,443	0/1:10,0:10:20.70:21,0,161	0/0:4,0:4:9.03:0,9,180	0/1:9,0:5:28.97:29,0,107	0/1:11,1:15:99:210,0,332	0/0:12,0:12:19.82:0,20,404	0/0:20,0:21:47.40:0,47,796	0/0:8,0:8:14.54:0,15,237	0/0:12,0:12:26.19:0,26,448	0/0:7,0:7:14.68:0,15,239	0/1:8,1:9:99:147,0,253	0/1:5,3:8:99:148,0,181	1/1:2,0:2:0.47:1,0,0
chr10	99695344	.	GAA	G	50.17	PASS	AB=0.926;AC=21;AF=0.420;AN=50;BaseQRankSum=4.574;DP=207;FS=2.423;HRun=2;HaplotypeScore=123.7835;InbreedingCoeff=0.2160;MQ=25.83;MQ0=9;MQRankSum=1.404;QD=0.46;ReadPosRankSum=3.186;VQSLOD=-0.3035;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:4:1.52:4,2,0	0/0:2,1:3:4.99:0,5,25	0/0:14,0:2:6.02:0,6,113	0/0:17,0:3:9.03:0,9,158	0/1:9,1:10:5.82:6,0,27	1/1:8,2:10:7.58:31,8,0	0/0:1,0:2:2.49:0,2,16	0/0:3,0:2:6.02:0,6,92	1/1:4,1:5:9.17:38,9,0	0/1:22,2:20:22.27:22,0,106	0/0:16,1:15:16.76:0,17,114	0/1:5,0:4:2.66:3,0,14	0/1:6,1:7:5.42:5,0,21	./.	0/0:6,1:7:0.47:0,0,22	0/1:8,2:9:0.30:0,0,36	1/1:2,0:2:2.50:9,2,0	1/1:5,0:5:9.32:43,9,0	./.	0/0:3,0:2:1.43:0,1,47	0/0:5,0:5:2.50:0,2,6	0/0:6,3:9:9.64:0,10,57	0/0:10,1:11:0.22:0,0,44	1/1:3,2:5:2.87:14,3,0	0/1:15,1:16:4.73:5,0,51	1/1:3,0:2:0.53:1,1,0	./.	0/1:2,0:1:0:0,0,0
chr10	99695347	.	GA	G	190.61	PASS	AB=0.735;AC=21;AF=0.404;AN=52;BaseQRankSum=4.365;DP=224;FS=0.000;HRun=2;HaplotypeScore=126.2864;InbreedingCoeff=-0.1716;MQ=25.81;MQ0=8;MQRankSum=-0.442;QD=1.46;ReadPosRankSum=3.900;VQSLOD=-0.7583;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:3.86:0,4,24	0/1:2,1:3:13.64:41,0,14	0/0:16,1:2:6.02:0,6,89	0/0:22,0:4:12.04:0,12,160	0/0:6,1:10:3.50:0,3,44	0/1:5,0:9:2.09:2,0,23	0/1:2,0:2:4.93:17,0,5	0/0:4,0:3:8.86:0,9,79	0/1:4,1:6:13.15:24,0,13	0/1:16,4:20:52.69:53,0,106	0/0:14,2:15:18.18:0,18,162	0/0:1,2:4:0.88:0,1,19	0/1:3,4:8:23.91:24,0,28	0/1:4,1:4:10.14:10,0,17	0/1:4,2:7:19.61:23,0,20	0/1:6,3:11:8.83:9,0,46	1/1:2,0:2:2.94:18,3,0	0/1:4,1:6:15.73:16,0,40	./.	0/1:2,0:2:1.72:2,0,18	1/1:3,0:5:4.41:14,4,0	0/1:8,2:10:7.96:8,0,47	0/0:7,3:11:5.26:0,5,83	1/1:2,2:5:4.57:18,5,0	0/1:6,7:18:48.66:49,0,68	0/1:2,0:3:0.35:0,0,0	./.	0/1:1,1:1:0:0,0,0
chr10	99695353	.	GA	G	192.13	PASS	AB=0.831;AC=21;AF=0.375;AN=56;BaseQRankSum=7.860;DP=259;FS=5.705;HRun=2;HaplotypeScore=123.9105;InbreedingCoeff=-0.0777;MQ=27.00;MQ0=7;MQRankSum=-0.927;QD=1.28;ReadPosRankSum=2.660;VQSLOD=-0.6462;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,1:5:6.89:0,7,54	0/1:3,0:3:17.27:17,0,20	0/0:25,0:5:10.95:0,11,146	0/0:26,0:5:14.96:0,15,186	0/1:6,4:10:4.68:5,0,44	0/1:6,4:10:0.78:1,0,34	0/0:3,0:3:2.98:0,3,22	0/0:7,0:6:17.84:0,18,155	0/1:6,1:7:22.31:22,0,42	0/1:21,4:22:52.83:53,0,156	0/0:17,1:16:17.34:0,17,212	0/1:3,2:4:1.22:1,0,22	0/1:8,1:9:32.65:33,0,52	0/0:6,0:5:5.75:0,6,41	0/1:5,1:6:3.31:3,0,20	0/0:8,4:11:11.17:0,11,118	1/1:2,0:2:2.82:19,3,0	0/1:8,1:9:9.80:10,0,65	0/0:1,0:1:2.97:0,3,20	0/1:4,1:4:4.92:5,0,29	1/1:3,2:5:5.52:18,6,0	0/1:10,2:12:9.31:9,0,125	0/1:11,2:13:16.51:17,0,88	1/1:4,1:5:7.91:57,8,0	0/1:12,7:19:57.54:58,0,99	1/1:1,3:3:4.04:15,4,0	0/0:1,0:1:3:0,3,28	0/0:4,0:3:2.02:0,2,6
chr10	99695355	.	A	AGG	1045.45	PASS	AB=0.934;AC=25;AF=0.446;AN=56;BaseQRankSum=8.309;DP=278;FS=7.963;HRun=1;HaplotypeScore=153.3751;InbreedingCoeff=-0.2785;MQ=27.81;MQ0=7;MQRankSum=0.611;QD=5.20;ReadPosRankSum=2.494;VQSLOD=-0.4784;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:5:4.46:4,0,41	0/1:2,0:3:22.36:26,0,22	0/0:29,0:7:10.78:0,11,160	0/0:27,0:6:14.83:0,15,180	0/1:11,0:11:41.04:41,0,47	0/1:8,0:10:4.43:18,0,4	0/0:3,0:3:5.66:0,6,48	0/0:8,0:6:10.97:0,11,90	0/1:5,1:7:23.13:129,0,23	0/1:20,4:23:99:293,0,125	0/1:16,2:17:7.49:7,0,215	0/1:5,0:4:21.24:36,0,21	0/1:8,1:10:34.59:35,0,92	0/0:6,0:5:5.15:0,5,34	0/1:5,0:6:23.46:26,0,23	0/1:12,0:11:33.86:34,0,101	1/1:5,0:5:2.66:8,3,0	0/1:8,1:9:20.25:20,0,72	0/0:2,0:2:5.80:0,6,32	0/1:5,0:4:14.17:14,0,41	1/1:6,0:6:6.85:47,7,0	0/1:9,2:12:59.73:60,0,124	0/1:9,3:13:64.91:65,0,93	1/1:1,2:5:7.29:78,7,0	0/1:14,7:22:87.06:189,0,87	1/1:4,0:3:8.56:45,9,0	0/0:1,0:1:3:0,3,29	0/1:5,0:4:1.29:28,0,1
chr10	99695381	.	A	AG	1510.85	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=2.321;DP=393;FS=41.877;HRun=2;HaplotypeScore=135.7823;InbreedingCoeff=0.7386;MQ=63.61;MQ0=4;MQRankSum=-4.056;QD=15.11;ReadPosRankSum=-2.367;VQSLOD=0.6003;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:7:18.06:0,18,229	0/0:7,0:7:18.06:0,18,232	0/0:50,0:22:49.90:0,50,575	0/0:39,0:12:29.97:0,30,321	0/0:15,0:15:36.12:0,36,465	0/0:14,0:14:17.81:0,18,219	0/0:5,0:5:9.03:0,9,116	1/1:3,10:12:33.11:460,33,0	0/1:10,0:10:5.86:6,0,173	0/1:27,0:26:43.68:44,0,456	0/0:23,0:23:50.98:0,51,660	0/0:6,0:5:9.03:0,9,116	0/0:13,0:13:18.24:0,18,301	0/0:6,0:6:15.04:0,15,180	0/0:10,0:10:21.07:0,21,271	0/0:16,0:15:32.29:0,32,424	1/1:8,5:13:27.93:346,28,0	0/0:13,0:13:23.58:0,24,327	1/1:2,3:5:15:171,15,0	1/1:4,2:5:7.27:88,7,0	1/1:2,6:8:1.59:37,2,0	0/0:15,0:15:38.78:0,39,500	0/0:17,0:17:39.13:0,39,504	0/0:5,0:5:0.86:0,1,3	0/0:31,0:31:44.78:0,45,603	1/1:3,4:7:19.58:221,20,0	1/1:2,3:5:15.05:209,15,0	1/1:5,1:6:9.91:122,10,0
chr10	99695438	.	TA	T	4586.14	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=9.402;DP=378;FS=8.120;HRun=6;HaplotypeScore=57.0217;InbreedingCoeff=0.9839;MQ=73.66;MQ0=1;MQRankSum=-2.609;QD=28.84;ReadPosRankSum=1.350;VQSLOD=5.3958;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:27.07:287,27,0	0/0:6,0:6:18.02:0,18,217	0/0:9,0:8:18.02:0,18,193	0/0:18,0:16:32.73:0,33,292	0/0:23,0:22:60.19:0,60,780	1/1:1,20:21:60.15:637,60,0	0/0:7,0:7:21.07:0,21,274	1/1:3,10:13:30.02:295,30,0	1/1:2,13:15:45:448,45,0	0/0:17,0:17:39.12:0,39,497	0/0:21,0:21:57.19:0,57,744	0/0:12,0:12:36.09:0,36,441	0/0:12,0:12:33.06:0,33,411	0/0:11,0:11:33:0,33,391	0/0:10,0:10:27.09:0,27,352	0/0:10,0:10:27.03:0,27,325	1/1:4,13:17:45.11:479,45,0	1/1:4,17:21:57.11:592,57,0	1/1:3,5:8:18.04:193,18,0	1/1:1,12:13:36.09:385,36,0	1/1:0,6:6:18:178,18,0	0/0:22,0:22:60.06:0,60,711	0/0:16,0:16:36.07:0,36,449	0/0:3,0:3:9.03:0,9,117	0/0:22,0:22:63.18:0,63,796	1/1:2,14:16:48.11:502,48,0	1/1:2,13:15:42.01:428,42,0	1/1:0,5:5:15.04:161,15,0
chr10	99695447	.	AT	A	1060.67	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.816;DP=388;FS=7.633;HRun=4;HaplotypeScore=69.8157;InbreedingCoeff=0.9719;MQ=77.03;MQ0=1;MQRankSum=-2.108;QD=31.20;ReadPosRankSum=1.742;VQSLOD=4.1559;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:36.11:430,36,0	0/0:6,0:6:18.06:0,18,252	0/0:10,0:10:20.25:0,20,273	0/0:19,0:17:41.27:0,41,437	0/0:22,0:21:57.19:0,57,797	1/1:0,22:22:63.19:752,63,0	0/0:7,0:7:21.07:0,21,294	0/0:11,0:11:30.08:0,30,371	0/0:17,0:17:45.02:0,45,493	0/0:17,0:17:51.16:0,51,699	0/0:20,0:20:60.20:0,60,840	0/0:14,0:14:42.14:0,42,587	0/0:12,0:12:33.11:0,33,461	0/0:10,0:10:30.08:0,30,401	0/0:9,0:9:27.09:0,27,378	0/0:8,0:8:24.08:0,24,336	0/0:20,0:20:60.03:0,60,663	0/0:21,0:21:53.95:0,54,565	0/0:8,0:8:24.07:0,24,318	0/0:12,0:12:36.01:0,36,402	0/0:6,0:6:18.03:0,18,210	0/0:22,0:22:57.15:0,57,775	0/0:18,0:18:48.15:0,48,654	0/0:6,0:6:18.05:0,18,235	0/0:22,0:22:63.21:0,63,882	0/0:17,0:17:50.80:0,51,623	0/0:15,0:15:42.07:0,42,496	0/0:5,0:5:15.02:0,15,160
chr10	99695510	.	AT	A	4184.22	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=8.338;DP=417;FS=1.851;HRun=9;HaplotypeScore=48.1655;InbreedingCoeff=0.9775;MQ=67.76;MQ0=0;MQRankSum=-0.497;QD=21.68;ReadPosRankSum=-0.110;VQSLOD=4.0573;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:27.01:247,27,0	0/0:5,0:5:15.04:0,15,173	0/0:7,0:5:11.01:0,11,91	0/0:7,0:8:10.87:0,11,107	0/0:25,0:25:57.06:0,57,602	1/1:3,17:20:42.02:384,42,0	0/0:10,0:10:30.09:0,30,346	1/1:4,25:29:74.87:672,75,0	1/1:3,16:19:50.95:453,51,0	0/0:13,0:13:33.10:0,33,380	0/0:17,0:17:48.08:0,48,522	0/0:16,0:16:45.13:0,45,519	0/0:13,0:13:39.05:0,39,433	0/0:12,0:12:30.07:0,30,334	0/0:16,0:16:45.13:0,45,519	0/0:11,0:11:30.04:0,30,330	1/1:2,25:27:72.03:659,72,0	1/1:1,11:12:36:323,36,0	1/1:7,6:13:23.96:210,24,0	1/1:3,11:15:31.95:265,32,0	1/1:2,8:10:27.01:247,27,0	0/0:19,0:19:51.14:0,51,580	0/0:24,0:24:72.20:0,72,821	0/0:9,0:10:29.92:0,30,326	0/0:18,0:18:45.13:0,45,518	1/1:7,15:22:48.01:436,48,0	1/1:6,6:12:23.94:206,24,0	1/1:2,1:3:9:82,9,0
chr10	99695927	.	C	CCT	5425	PASS	AB=0.742;AC=16;AF=0.286;AN=56;BaseQRankSum=-11.512;DP=714;FS=3.983;HRun=0;HaplotypeScore=98.3367;InbreedingCoeff=0.6444;MQ=76.88;MQ0=9;MQRankSum=-0.575;QD=18.97;ReadPosRankSum=-2.984;VQSLOD=4.4267;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:32:62.50:0,62,307	0/0:12,0:12:18.05:0,18,216	0/0:55,0:34:26.30:0,26,336	0/1:62,0:41:8.46:8,0,191	0/0:16,0:18:41.79:0,42,459	0/0:2,0:18:28.41:0,28,140	0/0:20,0:22:47.55:0,48,531	1/1:21,23:44:69.23:1076,69,0	0/1:5,15:21:40.93:486,0,41	0/0:21,0:21:54.15:0,54,635	0/0:11,0:12:29.92:0,30,337	0/0:21,0:21:51.16:0,51,611	0/0:29,0:29:69.21:0,69,827	0/0:21,0:21:39.12:0,39,467	0/0:41,0:42:94:0,94,1094	0/0:20,0:21:57:0,57,650	0/0:22,0:24:57.01:0,57,661	1/1:4,11:14:32.70:478,33,0	0/1:11,7:18:11.89:295,0,12	1/1:4,15:21:36.08:548,36,0	1/1:10,21:30:6.16:588,6,0	0/0:12,0:12:30.08:0,30,348	0/0:20,0:20:42.13:0,42,503	0/0:25,0:25:72.22:0,72,863	0/0:23,0:23:57.17:0,57,683	1/1:8,18:27:24.20:836,24,0	0/1:19,16:36:20.76:630,0,21	1/1:0,10:10:30.10:479,30,0
chr10	99696130	.	AAAAATAAAAT	A	7254.33	PASS	AB=1.000;AC=19;AF=0.352;AN=54;BaseQRankSum=10.833;DP=379;FS=19.354;HRun=0;HaplotypeScore=108.4760;InbreedingCoeff=0.8758;MQ=65.91;MQ0=2;MQRankSum=-7.098;QD=40.98;ReadPosRankSum=-0.265;VQSLOD=3.0860;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,18:24:27.09:815,27,0	0/0:8,0:8:21.07:0,21,899	0/0:6,0:6:6.02:0,6,98	0/0:17,0:12:4.68:0,5,212	0/0:20,0:20:45.14:0,45,1854	1/1:3,14:16:24.08:729,24,0	0/0:9,0:9:9.03:0,9,312	1/1:14,18:32:54.16:1251,54,0	1/1:1,11:12:21.07:644,21,0	0/0:22,0:22:48.16:0,48,2214	0/0:15,0:15:24.08:0,24,1089	0/0:11,0:11:12.04:0,12,571	0/0:7,0:7:18.06:0,18,818	0/0:4,0:4:12.04:0,12,517	0/0:10,0:10:24.08:0,24,863	0/0:9,0:9:24.08:0,24,1033	0/0:10,0:17:24.08:0,24,785	0/1:4,0:4:0:0,0,0	1/1:8,10:18:27.09:787,27,0	1/1:3,5:8:12.04:368,12,0	./.	0/0:5,0:5:3.01:0,3,147	0/0:7,0:7:15.05:0,15,643	0/0:5,0:5:12.04:0,12,529	0/0:22,0:22:51.18:0,51,2373	1/1:2,21:23:57.15:1279,57,0	1/1:6,19:24:20.67:644,21,0	1/1:1,13:14:24.08:736,24,0
chr10	99696444	.	C	CTGTTTG	688.60	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=6.302;DP=419;FS=4.787;HRun=0;HaplotypeScore=104.6626;InbreedingCoeff=0.0847;MQ=57.48;MQ0=32;MQRankSum=-4.485;QD=4.85;ReadPosRankSum=-2.076;VQSLOD=1.6658;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:2.48:0,2,22	0/0:3,0:3:9.03:0,9,212	0/0:32,0:13:29.25:0,29,529	0/0:36,0:16:17.68:0,18,292	0/0:15,0:15:39.06:0,39,643	0/1:21,0:20:44.46:44,0,122	0/0:15,0:15:33.39:0,33,653	0/1:28,0:26:82.49:82,0,356	1/1:7,7:11:7.77:124,8,0	0/0:12,0:12:33.08:0,33,507	0/0:6,0:6:15.02:0,15,216	0/0:18,0:18:36:0,36,574	0/0:14,0:14:26.02:0,26,571	0/0:16,0:16:39.02:0,39,593	0/0:14,0:13:33.10:0,33,727	0/0:16,0:15:42.02:0,42,662	0/0:11,0:10:27.03:0,27,438	1/1:9,0:8:14.96:121,15,0	0/1:5,0:4:40.85:67,0,41	0/1:19,0:17:66.85:67,0,76	0/1:10,0:9:33.97:34,0,54	0/0:18,0:18:54.09:0,54,996	0/0:9,0:9:24.02:0,24,380	0/0:12,0:12:4.77:0,5,368	0/0:11,0:11:27.05:0,27,498	0/1:16,0:15:85.16:230,0,85	0/1:10,0:9:59.10:59,0,74	0/1:10,0:7:16.96:17,0,57
chr10	99697083	.	T	TAAA	3692.02	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=0.050;DP=426;FS=17.075;HRun=11;HaplotypeScore=63.9445;InbreedingCoeff=0.9173;MQ=74.43;MQ0=4;MQRankSum=-1.380;QD=22.24;ReadPosRankSum=-2.997;VQSLOD=-0.0168;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:17:18.41:57,18,0	0/0:5,0:6:14.96:0,15,147	0/0:29,0:17:13.02:0,13,103	0/0:22,0:11:7.30:0,7,77	0/0:29,0:29:66.97:0,67,759	1/1:3,0:17:11.21:25,11,0	0/0:12,0:14:28.52:0,29,305	1/1:6,21:29:70.10:1206,70,0	1/1:2,1:3:6.01:83,6,0	0/0:16,0:16:38.88:0,39,422	0/0:23,0:23:54.06:0,54,619	0/0:7,0:7:21.06:0,21,245	0/0:11,0:11:26.91:0,27,295	0/0:13,0:14:36.01:0,36,403	0/0:16,0:16:36:0,36,400	0/0:9,0:10:23.93:0,24,230	1/1:4,0:10:26.91:223,27,0	1/1:3,7:11:12.04:226,12,0	1/1:1,6:7:18.06:296,18,0	1/1:7,13:20:32.91:403,33,0	1/1:0,5:7:3.01:56,3,0	0/0:9,0:9:21.04:0,21,245	0/0:15,0:15:39.10:0,39,455	0/0:5,0:5:9:0,9,105	0/0:32,0:32:70.73:0,71,827	1/1:3,8:14:33.07:488,33,0	1/1:5,10:17:24.06:404,24,0	1/1:5,8:14:12.04:226,12,0
chr10	99698974	.	T	TTG	2111.83	PASS	AB=0.828;AC=14;AF=0.259;AN=54;BaseQRankSum=2.133;DP=652;FS=8.816;HRun=0;HaplotypeScore=123.7722;InbreedingCoeff=0.4112;MQ=61.56;MQ0=1;MQRankSum=1.299;QD=8.80;ReadPosRankSum=-2.704;VQSLOD=2.3584;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:32:2.84:0,3,14	0/0:11,0:11:9.02:0,9,100	./.	0/1:20,0:14:0:0,0,0	0/1:15,1:18:18.55:19,0,201	0/0:8,0:15:8.52:0,9,42	0/0:30,0:34:56.46:0,56,545	1/1:30,0:30:23.68:252,24,0	0/0:7,0:19:31.25:0,31,154	0/0:23,0:23:23.79:0,24,244	0/0:13,0:15:26.89:0,27,270	0/0:19,0:20:35.90:0,36,362	0/0:30,0:33:56.97:0,57,602	0/0:30,0:30:51.13:0,51,560	0/0:16,0:17:29.28:0,29,288	0/0:25,0:27:35.76:0,36,361	1/1:16,18:36:45.15:679,45,0	0/0:13,0:30:45.55:0,46,227	1/1:18,6:25:3.91:212,4,0	0/1:9,8:18:18.23:166,0,18	0/1:16,12:32:72.72:281,0,73	0/0:14,0:14:30.06:0,30,319	0/0:11,0:11:15.04:0,15,166	0/0:34,0:36:50.80:0,51,522	0/0:21,0:25:50.47:0,50,488	0/1:29,6:36:99:239,0,99	1/1:8,7:16:21.07:317,21,0	0/1:7,2:9:21.23:112,0,21
chr10	99699621	.	AGTGT	A	1954.35	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=4.334;DP=596;FS=0.000;HRun=0;HaplotypeScore=118.7998;InbreedingCoeff=0.8007;MQ=64.54;MQ0=11;MQRankSum=1.322;QD=12.61;ReadPosRankSum=-0.271;VQSLOD=2.5386;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:18.74:0,19,115	0/0:3,0:3:9.03:0,9,203	0/0:33,0:17:10.80:0,11,75	0/0:34,0:22:5.13:0,5,94	0/0:19,0:19:26.66:0,27,570	0/0:13,0:13:8.05:0,8,98	0/0:14,0:16:28.10:0,28,456	1/1:31,0:29:9.16:449,9,0	0/1:10,0:10:4.94:127,0,5	0/0:25,0:24:45.46:0,45,1039	0/0:16,0:19:35.69:0,36,632	0/0:25,0:25:56.39:0,56,1081	0/0:23,0:23:54.19:0,54,1240	0/0:19,0:18:35.84:0,36,717	0/0:33,0:34:28.81:0,29,952	0/0:25,0:25:48.80:0,49,954	0/0:21,0:20:27:0,27,328	0/0:10,0:10:5.92:0,6,48	1/1:12,10:21:29.97:354,30,0	1/1:8,8:15:9.02:126,9,0	1/1:21,0:21:6.02:83,6,0	0/0:25,0:26:41.88:0,42,934	0/0:25,0:25:54.18:0,54,1221	0/0:24,0:26:53.92:0,54,1164	0/0:19,0:19:33.11:0,33,739	1/1:7,19:26:54.10:735,54,0	1/1:7,17:24:12.04:196,12,0	1/1:4,0:4:6:68,6,0
chr10	99699644	.	GTGTGTA	G	303.54	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=4.235;DP=610;FS=3.141;HRun=0;HaplotypeScore=146.8732;InbreedingCoeff=-0.0105;MQ=52.28;MQ0=17;MQRankSum=0.220;QD=1.47;ReadPosRankSum=-3.120;VQSLOD=1.3617;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:30.35:30,0,38	0/0:3,0:3:9.03:0,9,266	0/1:20,0:7:3.45:3,0,32	0/1:23,0:12:6.01:6,0,86	0/0:23,0:23:37.14:0,37,1079	0/1:20,0:20:15.14:15,0,96	0/0:26,0:25:39.20:0,39,855	0/1:35,0:32:47.24:47,0,322	1/1:5,6:11:12.02:150,12,0	0/0:29,0:28:38.45:0,38,1684	0/0:18,0:18:44.63:0,45,895	0/0:26,0:26:48.20:0,48,1199	0/0:24,0:23:63.13:0,63,1673	0/0:21,0:20:38.58:0,39,917	0/0:26,0:26:58.34:0,58,1294	0/0:29,0:29:50.09:0,50,1380	0/1:22,0:20:5.74:6,0,264	0/1:10,0:10:38.05:65,0,38	0/0:26,0:21:36.63:0,37,249	0/1:19,0:17:16.77:17,0,155	0/0:23,0:23:21.34:0,21,134	0/0:27,0:27:53.97:0,54,1501	0/0:31,0:29:53.43:0,53,1730	0/0:31,0:31:68.95:0,69,1706	0/0:16,0:16:42.09:0,42,1110	0/1:26,0:26:99:107,0,200	0/0:19,0:19:12.01:0,12,48	0/0:5,0:4:7.03:0,7,38
chr10	99699648	.	GTA	G	1055.91	PASS	AB=0.956;AC=18;AF=0.321;AN=56;BaseQRankSum=9.098;DP=582;FS=2.763;HRun=0;HaplotypeScore=105.5386;InbreedingCoeff=0.2531;MQ=50.81;MQ0=14;MQRankSum=-0.082;QD=4.11;ReadPosRankSum=-0.312;VQSLOD=1.9949;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:5.05:88,5,0	0/0:4,0:4:11.91:0,12,152	0/1:15,0:9:4.53:5,0,42	0/1:17,0:10:0.01:0,0,134	0/0:21,0:21:37.08:0,37,572	1/1:19,0:19:4.15:51,4,0	0/0:23,0:22:11.46:0,11,445	0/1:30,1:28:99:170,0,259	1/1:10,0:10:11.95:92,12,0	0/0:28,0:27:37.79:0,38,872	0/0:18,0:18:15.63:0,16,410	0/0:26,0:26:46.87:0,47,638	0/0:26,0:25:63.95:0,64,859	0/0:21,0:20:15.13:0,15,441	0/0:24,0:24:41.18:0,41,701	0/0:27,0:27:33.09:0,33,652	1/1:20,0:18:6.97:71,7,0	0/1:8,0:8:1.14:67,0,1	0/1:26,0:21:99:200,0,116	0/1:19,0:17:1.82:2,0,140	0/1:7,15:22:68.89:75,0,69	0/0:28,0:28:42.57:0,43,726	0/0:33,0:31:42.88:0,43,959	0/0:31,0:31:37.81:0,38,853	0/0:15,0:15:39.07:0,39,558	0/1:26,0:26:72.64:342,0,73	0/1:19,0:19:1.78:37,0,2	0/1:5,0:4:13.87:19,0,14
chr10	99699661	.	T	TGAGA	80.09	PASS	AB=0.847;AC=6;AF=0.107;AN=56;BaseQRankSum=6.148;DP=559;FS=0.989;HRun=0;HaplotypeScore=121.4033;InbreedingCoeff=0.2477;MQ=53.49;MQ0=12;MQRankSum=-2.685;QD=1.36;ReadPosRankSum=-1.196;VQSLOD=2.3626;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,2:13:8.01:76,8,0	0/0:6,0:6:9.03:0,9,160	0/0:24,0:12:23.91:0,24,414	0/0:21,0:13:30.10:0,30,586	0/0:20,0:20:49.60:0,50,958	0/1:6,9:16:35.60:71,0,36	0/0:28,0:27:78:0,78,1319	0/0:30,0:28:46.96:0,47,1335	0/1:10,0:10:8.11:27,0,8	0/0:28,0:27:81.14:0,81,1423	0/0:19,0:19:45.14:0,45,774	0/0:20,0:20:47.80:0,48,728	0/0:24,0:23:62.83:0,63,1104	0/0:21,0:20:41.82:0,42,607	0/0:25,0:25:51.14:0,51,867	0/0:28,0:28:62.18:0,62,1040	0/1:12,0:15:19.90:20,0,230	0/1:3,0:3:4.52:5,0,15	0/0:24,0:19:7.04:0,7,358	0/0:18,0:16:33.11:0,33,619	0/0:22,0:22:16.05:0,16,523	0/0:27,0:27:49.83:0,50,1013	0/0:32,0:30:69.20:0,69,1241	0/0:24,0:24:57.18:0,57,1033	0/0:16,0:16:42.14:0,42,730	0/0:22,0:22:34.29:0,34,698	0/0:17,0:17:21.07:0,21,367	0/0:4,0:3:9.03:0,9,177
chr10	99708343	.	TAA	T	2450.05	PASS	AB=0.590;AC=18;AF=0.321;AN=56;BaseQRankSum=6.766;DP=602;FS=0.845;HRun=15;HaplotypeScore=89.0982;InbreedingCoeff=0.8419;MQ=71.80;MQ0=2;MQRankSum=-0.263;QD=11.84;ReadPosRankSum=1.940;VQSLOD=2.9410;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,25:36:68.53:594,69,0	0/0:6,0:7:17.54:0,18,208	0/0:38,0:26:12.56:0,13,279	0/0:21,0:13:4.59:0,5,56	0/0:27,0:31:70.38:0,70,804	1/1:5,18:23:41.86:370,42,0	0/0:12,0:14:26.26:0,26,278	1/1:11,15:26:33.11:312,33,0	0/0:11,0:23:30.05:0,30,324	0/0:29,0:35:84.10:0,84,970	0/0:22,0:23:42.59:0,43,536	0/0:21,0:22:45.78:0,46,497	0/0:14,0:17:35.91:0,36,373	0/0:20,0:24:41.61:0,42,518	0/0:25,0:25:60.08:0,60,689	0/0:15,0:18:42.07:0,42,484	0/1:3,1:19:0:0,0,74	0/0:4,0:16:27.03:0,27,254	1/1:9,4:18:10.72:149,11,0	1/1:7,10:17:27.60:259,28,0	0/1:6,7:14:4.49:144,0,4	0/0:14,2:17:12.16:0,12,407	0/0:16,0:16:36.03:0,36,423	0/0:21,1:26:39.05:0,39,720	0/0:20,0:22:58.38:0,58,656	1/1:6,11:18:32.58:276,33,0	1/1:4,24:29:41.77:507,42,0	1/1:3,1:5:5.68:38,6,0
chr10	99708569	.	G	GAA	2628.09	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.462;DP=663;FS=7.359;HRun=3;HaplotypeScore=79.4916;InbreedingCoeff=0.9838;MQ=87.74;MQ0=0;MQRankSum=-3.202;QD=44.54;ReadPosRankSum=2.682;VQSLOD=2.7064;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,35:37:90.31:1650,90,0	0/0:9,0:9:27.09:0,27,377	0/0:34,0:33:83.97:0,84,1117	0/0:27,0:26:65.23:0,65,838	0/0:25,0:25:75.21:0,75,1009	1/1:0,21:22:60.21:1100,60,0	0/0:23,0:23:63.20:0,63,865	0/0:29,0:29:75.23:0,75,1019	0/0:28,0:28:81.23:0,81,1095	0/0:30,0:30:84.28:0,84,1175	0/0:21,0:21:60.20:0,60,830	0/0:25,0:25:75.24:0,75,1029	0/0:27,0:27:81.24:0,81,1098	0/0:17,0:17:48.16:0,48,672	0/0:24,0:24:72.23:0,72,991	0/0:21,0:21:63.21:0,63,881	0/0:30,0:30:87.23:0,87,1161	0/0:34,0:34:87.27:0,87,1197	0/0:17,0:17:51.16:0,51,692	0/0:24,0:24:69.23:0,69,966	0/0:33,0:33:99:0,99,1350	0/0:17,0:17:48.15:0,48,655	0/0:22,0:22:63.21:0,63,882	0/0:14,0:14:36.12:0,36,504	0/0:17,0:17:45.15:0,45,629	0/0:25,0:25:75.24:0,75,1033	0/0:27,0:27:75.25:0,75,1047	0/0:4,0:4:12.04:0,12,168
chr10	99709065	.	TC	T	3772.21	PASS	AB=0.918;AC=25;AF=0.446;AN=56;BaseQRankSum=3.371;DP=432;FS=0.851;HRun=10;HaplotypeScore=52.2596;InbreedingCoeff=0.6547;MQ=71.34;MQ0=0;MQRankSum=-0.362;QD=14.40;ReadPosRankSum=1.695;VQSLOD=3.6788;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:18:35.99:312,36,0	0/0:5,0:5:12.03:0,12,133	0/0:15,0:12:11.88:0,12,177	0/1:10,1:11:13.90:14,0,119	0/0:20,1:21:16.06:0,16,404	1/1:0,19:19:47.98:417,48,0	0/1:8,1:9:2:2,0,199	1/1:4,20:24:56.98:493,57,0	0/0:15,0:15:37.50:0,37,155	0/0:14,0:14:12.11:0,12,190	0/1:17,1:18:5.38:5,0,375	0/0:12,0:12:24.06:0,24,266	0/0:12,0:12:33.08:0,33,356	0/0:11,0:11:32.98:0,33,348	0/0:11,0:12:32.89:0,33,328	0/0:15,0:15:33.09:0,33,365	1/1:1,0:15:26.48:78,26,0	0/0:14,0:14:32.14:0,32,133	1/1:5,16:21:7.08:393,7,0	1/1:3,10:13:35.99:312,36,0	1/1:0,9:9:26.99:234,27,0	0/1:14,2:16:13.01:13,0,325	0/0:11,1:12:7.01:0,7,285	0/1:14,1:15:9.98:10,0,346	0/0:12,0:12:33.08:0,33,358	1/1:5,21:26:67.80:577,68,0	1/1:6,23:29:56.85:494,57,0	1/1:1,18:19:47.99:417,48,0
chr10	99709068	.	C	CT	964.27	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.265;DP=428;FS=3.922;HRun=0;HaplotypeScore=63.0791;InbreedingCoeff=0.9881;MQ=69.05;MQ0=0;MQRankSum=1.155;QD=32.14;ReadPosRankSum=1.933;VQSLOD=3.2385;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:47.57:0,48,336	0/0:6,0:6:15.01:0,15,185	0/0:14,0:11:27.02:0,27,313	0/0:9,0:9:24.52:0,25,254	0/0:19,0:19:54.07:0,54,652	0/0:19,0:19:50.15:0,50,328	0/0:11,0:11:29.97:0,30,340	0/0:24,0:24:65.34:0,65,458	1/1:1,14:15:42.13:585,42,0	0/0:12,0:12:33.70:0,34,368	0/0:18,0:18:50.79:0,51,599	0/0:14,0:14:41.66:0,42,469	0/0:12,0:12:36.10:0,36,468	0/0:12,0:12:31.64:0,32,442	0/0:11,0:11:26.90:0,27,382	0/0:13,0:13:39.07:0,39,505	0/0:16,0:16:41.25:0,41,256	1/1:0,15:15:36.12:501,36,0	0/0:22,0:22:64.26:0,64,467	0/0:13,0:13:35.58:0,36,237	0/0:9,0:9:26.70:0,27,178	0/0:15,0:15:42.04:0,42,523	0/0:11,0:11:33:0,33,397	0/0:15,0:15:45.01:0,45,546	0/0:12,0:12:33.10:0,33,445	0/0:25,0:25:74.17:0,74,502	0/0:28,0:28:71.29:0,71,494	0/0:18,0:18:47.47:0,47,317
chr10	99709644	.	TGTGA	T	1939.93	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.963;DP=647;FS=5.088;HRun=0;HaplotypeScore=102.4461;InbreedingCoeff=0.9956;MQ=59.91;MQ0=2;MQRankSum=-0.579;QD=34.03;ReadPosRankSum=3.222;VQSLOD=3.7055;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:47.45:956,47,0	0/0:14,0:14:39.09:0,39,1020	0/0:36,0:15:42.09:0,42,1082	0/0:40,0:29:47.73:0,48,1554	0/0:14,0:14:39.13:0,39,1055	1/1:1,30:31:57.19:1105,57,0	0/0:20,0:20:54.05:0,54,1445	0/0:43,0:43:99:0,129,3173	0/0:26,0:26:78.27:0,78,2102	0/0:14,0:14:39.13:0,39,1075	0/0:19,0:19:57.18:0,57,1473	0/0:21,0:21:63.20:0,63,1660	0/0:22,0:22:66.23:0,66,1808	0/0:23,0:23:69.22:0,69,1862	0/0:20,0:20:60.21:0,60,1611	0/0:24,0:24:72.25:0,72,1936	0/0:41,0:41:99:0,114,2957	0/0:12,0:12:36.08:0,36,884	0/0:19,0:19:42.36:0,42,1409	0/0:22,0:21:63.19:0,63,1695	0/0:33,0:33:99:0,99,2600	0/0:22,0:22:66.21:0,66,1749	0/0:17,0:17:45.14:0,45,1175	0/0:14,0:14:38.76:0,39,985	0/0:18,0:18:54.19:0,54,1443	0/0:22,0:22:63.21:0,63,1654	0/0:27,0:27:81.26:0,81,2171	0/0:7,0:7:18.06:0,18,503
chr10	99709994	.	TG	T	1708.66	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.394;DP=680;FS=1.873;HRun=2;HaplotypeScore=75.5611;InbreedingCoeff=0.9989;MQ=90.86;MQ0=0;MQRankSum=-3.497;QD=34.87;ReadPosRankSum=0.407;VQSLOD=3.9701;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:60.20:779,60,0	0/0:13,0:13:39.13:0,39,584	0/0:32,0:32:87.27:0,87,1275	0/0:22,0:22:59.22:0,59,856	0/0:33,0:33:96.27:0,96,1360	1/1:0,29:29:81.26:1051,81,0	0/0:15,0:15:45.14:0,45,655	0/0:31,0:31:90.30:0,90,1330	0/0:25,0:25:72.24:0,72,1079	0/0:35,0:35:96.32:0,96,1419	0/0:19,0:19:51.16:0,51,744	0/0:15,0:15:42.14:0,42,627	0/0:31,0:31:87.29:0,87,1297	0/0:25,0:25:69.21:0,69,1012	0/0:20,0:20:60.19:0,60,878	0/0:33,0:33:99:0,99,1464	0/0:29,0:29:84.28:0,84,1257	0/0:10,0:10:24.08:0,24,359	0/0:21,0:21:63.15:0,63,877	0/0:28,0:28:78.16:0,78,1119	0/0:14,0:14:39.13:0,39,584	0/0:24,0:24:72.24:0,72,1079	0/0:29,0:29:84.26:0,84,1218	0/0:18,0:18:51.16:0,51,744	0/0:25,0:25:75.19:0,75,1095	0/0:36,0:36:99:0,108,1598	0/0:26,0:26:78.25:0,78,1147	0/0:22,0:22:66.22:0,66,989
chr10	99712164	.	A	ACGGCCTT	13160.32	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=6.381;DP=596;FS=1.809;HRun=0;HaplotypeScore=138.8398;InbreedingCoeff=0.9947;MQ=78.50;MQ0=0;MQRankSum=-15.720;QD=77.87;ReadPosRankSum=-0.368;VQSLOD=5.4102;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:36:60.21:2260,60,0	0/0:12,0:12:36.11:0,36,948	0/0:24,0:23:66.21:0,66,1675	0/0:25,0:25:66.16:0,66,1541	0/0:25,0:25:72.23:0,72,1918	1/1:1,17:20:51.18:1977,51,0	0/0:29,0:29:78.23:0,78,1862	1/1:10,7:17:42.14:1491,42,0	0/0:22,0:22:63.22:0,63,1730	0/0:16,0:16:45.15:0,45,1255	0/0:17,0:17:48.16:0,48,1335	0/0:19,0:19:57.20:0,57,1543	0/0:20,0:20:60.19:0,60,1613	0/0:27,0:27:81.28:0,81,2257	0/0:24,0:24:72.24:0,72,1875	0/0:26,0:26:78.25:0,78,2121	0/0:26,0:26:71.78:0,72,1940	0/0:25,0:25:72.23:0,72,1946	1/1:7,6:13:33.11:1111,33,0	1/1:0,9:15:30.10:1037,30,0	1/1:0,8:17:24.08:752,24,0	0/0:27,0:27:81.26:0,81,2115	0/0:15,0:15:42.13:0,42,1054	0/0:25,0:25:75.26:0,75,2015	0/0:23,0:23:69.21:0,69,1705	1/1:1,20:24:69.23:2473,69,0	1/1:0,15:22:40.71:1594,41,0	1/1:0,4:5:12.04:464,12,0
chr10	99712807	.	G	GTATA	1639.84	PASS	AB=0.875;AC=18;AF=0.321;AN=56;BaseQRankSum=0.626;DP=318;FS=21.782;HRun=0;HaplotypeScore=56.6368;InbreedingCoeff=0.5775;MQ=66.10;MQ0=2;MQRankSum=1.096;QD=17.26;ReadPosRankSum=1.104;VQSLOD=1.5901;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,9:14:18.06:449,18,0	0/0:5,0:5:12.01:0,12,170	0/0:11,0:4:1.08:0,1,45	0/1:17,0:11:5.78:13,0,6	0/0:19,0:20:38.40:0,38,749	1/1:1,9:10:18.06:449,18,0	0/0:3,0:3:6.02:0,6,102	0/0:19,0:20:45.11:0,45,642	1/1:4,0:5:3.01:53,3,0	0/0:14,0:16:35.33:0,35,702	0/0:24,0:24:57.14:0,57,902	0/0:4,0:4:9:0,9,100	0/0:13,0:13:27.07:0,27,431	1/1:2,0:6:13.69:59,14,0	0/0:10,0:10:24.08:0,24,401	0/0:9,0:9:24.07:0,24,381	0/1:8,9:20:6.76:686,0,7	0/1:6,0:7:1.27:48,0,1	0/0:13,0:15:17.29:0,17,363	0/0:14,0:16:42.14:0,42,671	0/0:12,0:12:24.08:0,24,402	1/1:2,0:4:2.80:13,3,0	1/1:1,0:6:5.53:25,6,0	1/1:1,0:2:2.80:13,3,0	0/0:15,0:15:39.13:0,39,661	0/0:15,0:14:30.10:0,30,509	0/0:15,0:14:33.11:0,33,541	0/1:4,0:4:8.69:9,0,141
chr10	99712884	.	AT	A	261.26	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=4.697;DP=244;FS=0.000;HRun=6;HaplotypeScore=25.6351;InbreedingCoeff=0.4918;MQ=70.96;MQ0=0;MQRankSum=0.691;QD=16.33;ReadPosRankSum=0.294;VQSLOD=1.9222;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:39.13:0,39,513	0/0:6,0:6:18.06:0,18,237	0/1:3,0:3:0.27:0,0,26	0/0:4,1:5:6.02:0,6,79	0/0:11,0:11:33.09:0,33,419	0/0:10,0:10:27.09:0,27,355	0/0:4,0:4:8.99:0,9,99	0/0:21,0:21:54.17:0,54,698	0/0:3,0:3:9.03:0,9,118	0/0:14,0:14:36.12:0,36,473	0/0:16,0:16:48.16:0,48,632	0/0:5,0:5:15.05:0,15,197	0/0:7,0:7:21.07:0,21,275	0/0:7,0:7:21.07:0,21,276	0/0:8,0:8:24.08:0,24,316	0/0:3,0:3:9.03:0,9,118	1/1:0,12:12:33.08:355,33,0	0/0:21,0:21:63.19:0,63,813	0/0:14,0:14:39.13:0,39,514	0/0:4,0:4:12.04:0,12,158	0/0:3,0:3:9.03:0,9,118	0/0:1,0:1:3.01:0,3,39	0/0:1,0:1:0:0,0,0	0/0:1,0:1:3.01:0,3,39	0/0:10,0:10:24.07:0,24,304	0/0:10,0:10:30.10:0,30,395	0/0:17,0:17:51.17:0,51,671	0/0:10,0:10:30.10:0,30,395
chr10	99713293	.	G	GT	856.85	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.502;DP=510;FS=4.935;HRun=7;HaplotypeScore=47.5689;InbreedingCoeff=0.9930;MQ=79.74;MQ0=0;MQRankSum=-1.875;QD=27.64;ReadPosRankSum=0.938;VQSLOD=4.2895;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.11:0,84,804	0/0:8,0:8:18.02:0,18,174	0/0:13,0:13:33.05:0,33,315	0/0:18,0:18:23.29:0,23,327	0/0:20,0:20:54.09:0,54,521	0/0:21,0:21:60.07:0,60,572	0/0:10,0:10:27.93:0,28,263	0/0:37,0:37:72.09:0,72,695	1/1:0,16:16:45.14:544,45,0	0/0:18,0:18:48.07:0,48,460	0/0:16,0:16:48.06:0,48,457	0/0:10,0:10:27.04:0,27,261	0/0:17,0:17:45.07:0,45,435	0/0:10,0:10:30.05:0,30,290	0/0:18,0:18:51.08:0,51,493	0/0:18,0:18:54.09:0,54,521	0/0:27,0:27:66.09:0,66,637	1/1:2,13:15:36.11:435,36,0	0/0:17,0:17:45.07:0,45,435	0/0:16,0:16:42.07:0,42,406	0/0:11,0:11:33.05:0,33,318	0/0:20,0:20:54.09:0,54,522	0/0:20,0:20:48.07:0,48,463	0/0:19,0:19:54.07:0,54,516	0/0:20,0:20:57.09:0,57,550	0/0:20,0:20:51.08:0,51,492	0/0:24,0:24:69.11:0,69,665	0/0:20,0:20:60.10:0,60,579
chr10	99713679	.	A	ATTTCTTG	24030.97	PASS	AB=0.578;AC=23;AF=0.411;AN=56;BaseQRankSum=-6.056;DP=708;FS=0.301;HRun=0;HaplotypeScore=143.9773;InbreedingCoeff=0.9087;MQ=82.43;MQ0=0;MQRankSum=-17.162;QD=79.05;ReadPosRankSum=-4.713;VQSLOD=3.6765;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,21:28:63.22:2236,63,0	0/0:9,0:9:18.06:0,18,428	0/0:25,0:25:50.96:0,51,1099	0/0:24,0:24:66.22:0,66,1471	0/0:31,0:31:72.23:0,72,1748	1/1:6,26:33:90.31:3360,90,0	0/0:31,0:31:87.27:0,87,1979	1/1:16,20:42:99:3109,105,0	1/1:6,19:26:63.22:2348,63,0	0/0:30,0:30:87.26:0,87,2151	0/0:30,0:30:87.30:0,87,2116	0/0:20,0:20:51.17:0,51,1262	0/0:34,0:34:96.33:0,96,2378	0/0:22,0:22:66.23:0,66,1631	0/0:23,0:23:66.23:0,66,1643	0/0:35,0:35:99:0,99,2324	1/1:6,9:16:36.12:1270,36,0	1/1:3,7:13:7.63:459,8,0	1/1:11,11:23:57.20:1978,57,0	0/1:7,15:26:13.01:1835,0,13	1/1:5,14:21:21.07:740,21,0	0/0:23,0:23:69.24:0,69,1720	0/0:22,0:22:63.22:0,63,1565	0/0:21,0:21:57.20:0,57,1442	0/0:24,0:23:72.25:0,72,1800	1/1:3,18:24:66.19:2297,66,0	1/1:13,28:43:99:4053,111,0	1/1:2,7:9:9.03:347,9,0
chr10	99714255	.	TGACA	T	1637.04	PASS	AB=0.985;AC=18;AF=0.321;AN=56;BaseQRankSum=4.972;DP=456;FS=0.646;HRun=0;HaplotypeScore=92.2249;InbreedingCoeff=0.6968;MQ=79.84;MQ0=5;MQRankSum=-0.594;QD=9.69;ReadPosRankSum=1.515;VQSLOD=2.7943;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,1:39:11.90:0,12,1314	0/0:6,0:6:5.99:0,6,92	0/1:30,0:23:31.53:32,0,176	0/0:35,0:31:23.86:0,24,407	0/0:13,0:13:15.05:0,15,361	0/0:19,0:19:30.09:0,30,672	0/0:17,0:17:45.14:0,45,1034	1/1:14,3:16:9.03:141,9,0	0/1:14,0:14:33.26:33,0,273	0/0:14,0:14:33.11:0,33,726	0/0:14,0:14:12.04:0,12,266	0/0:7,0:7:18.06:0,18,416	0/0:6,0:5:6.02:0,6,142	0/0:15,0:15:21.05:0,21,406	0/0:9,0:9:12.04:0,12,289	0/0:10,0:10:6.02:0,6,145	1/1:9,8:17:5.83:96,6,0	0/0:21,0:21:45.11:0,45,1031	1/1:6,3:9:7.28:133,7,0	1/1:9,6:15:9.03:145,9,0	1/1:31,3:33:36.12:568,36,0	0/0:14,0:14:21.07:0,21,478	0/0:9,0:9:15.05:0,15,358	0/0:27,0:27:45.14:0,45,1032	0/0:12,0:12:18.06:0,18,413	1/1:5,9:14:27.06:386,27,0	1/1:8,2:10:6:54,6,0	1/1:7,0:7:15.05:242,15,0
chr10	99714287	.	ATG	A	208.66	PASS	AB=0.962;AC=8;AF=0.143;AN=56;BaseQRankSum=7.172;DP=461;FS=0.789;HRun=0;HaplotypeScore=76.9798;InbreedingCoeff=0.3298;MQ=51.60;MQ0=45;MQRankSum=-0.465;QD=2.24;ReadPosRankSum=1.042;VQSLOD=1.4245;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,2:31:54.27:0,54,867	0/0:4,0:3:9.03:0,9,158	0/0:55,0:16:41.19:0,41,393	0/0:55,0:15:7.22:0,7,517	0/0:7,0:7:17.99:0,18,287	0/0:14,0:13:29.93:0,30,495	0/0:22,0:21:60.08:0,60,1060	0/0:19,0:15:19.45:0,19,285	0/0:12,0:12:10.88:0,11,196	0/0:14,0:14:41.14:0,41,711	0/0:5,0:5:12.04:0,12,229	0/0:12,0:10:29.93:0,30,502	0/0:8,0:7:14.62:0,15,191	0/1:10,0:9:23:23,0,227	0/0:5,0:4:12.04:0,12,220	0/0:6,0:5:12.04:0,12,220	0/1:19,0:18:0.22:0,0,60	0/0:20,0:20:25.39:0,25,741	0/0:12,0:8:13.26:0,13,173	0/0:13,0:10:2.25:0,2,5	1/1:35,1:32:20.11:168,20,0	0/0:11,0:11:32.98:0,33,557	0/0:8,0:8:20.98:0,21,276	0/0:26,0:23:44.24:0,44,771	0/0:8,0:8:15.05:0,15,272	0/1:14,1:12:29.34:29,0,90	1/1:2,1:3:2.96:48,3,0	0/1:9,0:8:53.96:70,0,54
chr10	99714314	.	CAG	C	1791.22	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=6.776;DP=458;FS=24.810;HRun=0;HaplotypeScore=68.8555;InbreedingCoeff=-0.2864;MQ=42.88;MQ0=62;MQRankSum=1.197;QD=4.17;ReadPosRankSum=-1.829;VQSLOD=0.5457;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:29:84.15:97,0,84	0/1:7,0:5:18.81:19,0,71	0/1:22,0:3:0:0,0,0	0/0:23,0:4:2.03:0,2,29	0/1:10,0:9:35.58:36,0,85	0/1:14,0:13:52.45:57,0,52	0/1:26,0:23:0.49:0,0,252	1/1:7,9:13:2.77:160,3,0	1/1:2,13:15:1.98:44,2,0	0/1:20,0:18:47.97:48,0,246	0/0:5,0:4:5.97:0,6,46	0/1:13,0:10:31.18:31,0,66	0/1:16,0:14:14.95:15,0,58	0/1:10,0:4:12:44,0,12	0/1:10,0:7:23.98:24,0,55	0/1:11,0:10:30.06:51,0,30	1/1:22,0:20:20.98:144,21,0	1/1:23,3:25:9.78:418,10,0	0/1:10,0:6:11.46:11,0,16	1/1:11,0:7:3.47:26,3,0	1/1:36,0:26:9.41:173,9,0	0/1:11,0:10:10:10,0,116	1/1:11,0:9:5.58:81,6,0	0/1:30,0:27:63.85:64,0,196	0/1:11,0:11:28.90:55,0,29	1/1:13,0:10:8.88:125,9,0	1/1:12,0:10:0.91:78,1,0	1/1:14,0:10:22.13:131,22,0
chr10	99714445	.	G	GT	5359.12	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-1.357;DP=463;FS=2.570;HRun=2;HaplotypeScore=62.4205;InbreedingCoeff=0.9029;MQ=79.10;MQ0=3;MQRankSum=-1.088;QD=25.04;ReadPosRankSum=2.385;VQSLOD=4.8043;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:26:50.53:672,51,0	0/0:6,0:6:17.95:0,18,177	0/0:32,0:15:5.13:0,5,156	0/0:31,0:20:6.76:0,7,107	0/0:15,0:15:27.30:0,27,281	1/1:0,17:18:36.12:498,36,0	0/0:14,0:14:32.92:0,33,362	1/1:18,1:19:56.98:557,57,0	1/1:4,13:17:20.27:405,20,0	0/0:21,0:21:61.89:0,62,629	0/0:18,0:19:55.27:0,55,580	0/0:10,0:10:30:0,30,320	0/0:7,0:7:3.68:0,4,134	0/0:12,0:12:29.77:0,30,285	0/0:15,0:15:35.92:0,36,373	0/0:7,0:7:21.01:0,21,217	1/1:8,14:22:47.18:559,47,0	1/1:4,18:22:28.23:493,28,0	1/1:14,0:14:31.26:322,31,0	1/1:15,4:19:50.32:566,50,0	1/1:10,1:11:24.05:259,24,0	0/0:12,0:12:32.85:0,33,325	0/0:17,0:17:38.48:0,38,506	0/0:10,0:10:20.31:0,20,218	0/0:21,0:21:47.85:0,48,483	1/1:12,2:14:2.51:354,3,0	1/1:21,1:23:50.25:521,50,0	1/1:8,1:9:5.72:153,6,0
chr10	99714447	.	T	TTAA	4727.95	PASS	AB=0.786;AC=24;AF=0.429;AN=56;BaseQRankSum=3.136;DP=498;FS=0.419;HRun=0;HaplotypeScore=91.6778;InbreedingCoeff=0.8264;MQ=77.63;MQ0=3;MQRankSum=-0.008;QD=18.05;ReadPosRankSum=1.116;VQSLOD=4.5420;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:25:44.31:312,44,0	0/0:6,0:8:17.79:0,18,237	0/0:34,0:16:22.60:0,23,183	0/1:30,0:19:9.10:9,0,134	0/0:11,0:17:40.68:0,41,477	1/1:19,0:19:34.83:214,35,0	0/0:10,0:13:36.04:0,36,517	1/1:4,1:27:73:780,73,0	1/1:16,0:17:1.37:176,1,0	0/0:20,0:23:64.52:0,65,813	0/0:17,0:20:56.97:0,57,772	0/0:13,0:13:29.72:0,30,427	0/0:4,0:7:20.71:0,21,223	0/0:10,0:12:32.95:0,33,372	0/0:10,0:14:39.04:0,39,507	0/0:7,0:8:21.02:0,21,274	1/1:18,0:24:42.10:409,42,0	1/1:20,0:22:9.28:216,9,0	1/1:3,1:13:24.15:383,24,0	1/1:7,1:22:50.59:620,51,0	1/1:2,1:13:21.01:290,21,0	0/0:12,0:15:38.85:0,39,487	0/0:14,0:18:51.19:0,51,712	0/0:8,0:10:23.90:0,24,313	0/0:16,0:22:59.82:0,60,734	0/1:4,1:16:8.45:450,0,8	1/1:3,3:22:24.93:668,25,0	1/1:2,0:12:17.98:201,18,0
chr10	99718868	.	CA	C	1489.64	PASS	AB=0.727;AC=23;AF=0.411;AN=56;BaseQRankSum=3.274;DP=393;FS=0.000;HRun=14;HaplotypeScore=52.4653;InbreedingCoeff=0.1795;MQ=41.73;MQ0=32;MQRankSum=-1.277;QD=5.73;ReadPosRankSum=3.566;VQSLOD=1.8196;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,6:22:46.82:47,0,150	0/1:7,5:8:35.02:69,0,35	0/0:14,0:7:10.25:0,10,91	0/0:11,0:5:10.56:0,11,68	0/1:5,11:13:24.17:128,0,24	0/0:3,0:6:17.04:0,17,86	0/0:20,0:14:39.04:0,39,362	0/1:6,9:9:11.79:100,0,12	1/1:3,3:7:11.88:50,12,0	0/1:16,6:16:72.42:72,0,206	0/1:8,3:10:31.72:32,0,115	0/0:6,0:4:6.01:0,6,55	0/0:7,0:3:3:0,3,28	0/0:16,1:12:3.25:0,3,159	0/1:12,7:17:45.84:46,0,160	0/1:7,1:8:5.40:5,0,95	0/1:7,11:17:1.25:170,0,1	0/1:8,0:5:4.71:5,0,12	0/1:11,8:11:1.09:138,0,1	1/1:4,12:13:37.36:233,37,0	1/1:1,3:3:8.89:59,9,0	0/0:4,0:10:23.05:0,23,142	0/0:11,0:6:14.98:0,15,131	0/0:11,1:13:0.96:0,1,107	0/0:9,2:9:18.02:0,18,166	1/1:3,14:15:11.88:205,12,0	1/1:5,10:11:27.47:160,27,0	1/1:1,6:9:24.79:148,25,0
chr10	99719115	.	GA	G	979.28	PASS	AC=22;AF=0.423;AN=52;BaseQRankSum=1.163;DP=284;FS=3.166;HRun=9;HaplotypeScore=36.2171;InbreedingCoeff=0.7625;MQ=69.09;MQ0=22;MQRankSum=-0.068;QD=9.70;ReadPosRankSum=4.726;VQSLOD=0.9997;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:1.63:163,2,0	0/0:4,0:4:8.92:0,9,85	0/0:39,0:16:3.72:0,4,131	0/0:18,0:11:14.41:0,14,97	0/0:17,0:17:41.78:0,42,342	1/1:13,0:12:17.65:106,18,0	0/0:14,0:13:29.93:0,30,297	1/1:10,10:15:23.95:201,24,0	./.	0/0:15,0:10:24.02:0,24,231	0/0:12,0:12:20.96:0,21,200	0/0:4,0:4:9.03:0,9,103	0/0:8,0:8:21.03:0,21,227	0/0:1,0:1:3.01:0,3,33	0/0:6,0:5:9.97:0,10,119	./.	0/0:23,0:22:34.52:0,35,195	1/1:5,0:3:5.93:40,6,0	1/1:8,7:12:20.92:172,21,0	1/1:1,3:3:6:55,6,0	1/1:2,0:1:2.98:22,3,0	0/0:5,0:3:3.96:0,4,52	0/0:4,0:4:11.87:0,12,103	1/1:1,0:1:1.25:3,1,0	0/0:8,0:7:14.95:0,15,131	1/1:0,5:5:14.98:129,15,0	1/1:7,5:10:14.93:127,15,0	1/1:3,5:8:13.56:148,14,0
chr10	99719123	.	AAGG	A	972.19	PASS	AB=0.935;AC=14;AF=0.269;AN=52;BaseQRankSum=-0.486;DP=311;FS=31.688;HRun=0;HaplotypeScore=42.0413;InbreedingCoeff=0.0966;MQ=62.85;MQ0=35;MQRankSum=0.086;QD=7.84;ReadPosRankSum=0.167;VQSLOD=1.1025;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:2,14:16:29.80:512,0,30	0/1:6,0:5:19.56:20,0,133	0/0:44,0:14:27.92:0,28,280	0/0:19,0:10:12.94:0,13,85	0/0:17,0:17:41.79:0,42,458	1/1:6,8:12:18.06:297,18,0	0/0:14,0:12:29.94:0,30,532	0/1:16,0:9:36.10:73,0,36	./.	0/1:18,0:12:1.37:1,0,323	0/1:14,0:14:7.31:7,0,345	0/0:5,0:4:9.03:0,9,207	0/0:8,0:8:21.04:0,21,431	0/0:2,0:2:5.75:0,6,81	0/0:8,0:6:15.01:0,15,250	./.	0/0:22,0:21:16.34:0,16,55	1/1:5,0:4:4.35:37,4,0	0/1:16,0:11:38.74:39,0,55	0/1:7,0:5:24.62:50,0,25	1/1:4,0:3:5.99:54,6,0	0/0:5,0:3:8.99:0,9,121	0/0:5,0:5:11.87:0,12,165	0/0:4,0:3:9.03:0,9,115	0/0:7,1:7:14.95:0,15,198	0/1:7,0:6:31.36:31,0,41	0/0:12,0:10:0.35:0,0,95	0/0:9,0:8:3.31:0,3,111
chr10	99721189	.	G	GA	561.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.668;DP=515;FS=3.495;HRun=4;HaplotypeScore=56.4434;InbreedingCoeff=0.9736;MQ=69.82;MQ0=0;MQRankSum=-0.461;QD=31.21;ReadPosRankSum=1.528;VQSLOD=4.1496;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.23:0,81,919	0/0:7,0:7:18.05:0,18,204	0/0:18,0:18:44.83:0,45,481	0/0:18,0:17:44.58:0,45,447	0/0:12,0:12:29.94:0,30,331	0/0:15,0:15:32.73:0,33,374	0/0:24,0:24:72.19:0,72,807	0/0:26,0:26:75.21:0,75,844	0/0:22,0:22:66.16:0,66,729	0/0:27,0:27:72.19:0,72,806	0/0:13,0:13:39.11:0,39,442	0/0:16,0:16:39.11:0,39,442	0/0:24,0:24:63.15:0,63,694	0/0:20,0:20:51.14:0,51,579	0/0:32,0:32:87.25:0,87,983	0/0:18,0:18:54.14:0,54,603	1/1:1,17:18:48.16:657,48,0	0/0:14,0:14:42.12:0,42,476	0/0:18,0:17:42.10:0,42,460	0/0:15,0:15:45.13:0,45,510	0/0:18,0:18:39.11:0,39,442	0/0:22,0:21:57.15:0,57,637	0/0:6,0:6:15.04:0,15,170	0/0:28,0:28:66.15:0,66,729	0/0:19,0:19:51.13:0,51,570	0/0:12,0:12:36.10:0,36,408	0/0:15,0:15:42.08:0,42,462	0/0:9,0:9:24.07:0,24,272
chr10	99722603	.	G	GA	524.07	PASS	AB=0.949;AC=10;AF=0.179;AN=56;BaseQRankSum=-3.981;DP=555;FS=6.407;HRun=12;HaplotypeScore=65.9378;InbreedingCoeff=0.0264;MQ=71.69;MQ0=0;MQRankSum=-0.405;QD=3.49;ReadPosRankSum=-0.911;VQSLOD=0.0054;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,3:34:58.86:59,0,334	0/1:7,0:7:7.08:7,0,110	0/0:26,0:13:6.11:0,6,43	0/0:23,0:15:4.40:0,4,55	0/0:24,1:27:31.36:0,31,375	0/0:14,3:18:8.30:0,8,206	0/1:11,1:12:2.38:2,0,144	0/0:33,1:36:54.47:0,54,504	0/0:18,0:18:44.71:0,45,328	0/0:35,4:39:0.82:0,1,464	0/0:24,1:25:33.43:0,33,407	0/0:16,0:18:24.91:0,25,309	0/1:11,1:12:8.34:8,0,110	0/0:24,0:24:59.56:0,60,434	0/1:10,0:10:5.33:5,0,129	0/0:13,1:15:14.61:0,15,260	1/1:9,16:26:43.62:556,44,0	0/0:19,0:19:35.72:0,36,262	0/0:20,1:22:3.03:0,3,303	0/0:23,0:25:46.67:0,47,332	0/0:5,0:5:11.92:0,12,88	0/1:18,0:18:2.70:3,0,274	0/0:23,0:23:4.05:0,4,319	0/0:8,1:9:19.52:0,20,151	0/1:10,1:11:3.27:3,0,133	0/1:18,2:20:4.65:5,0,296	0/0:25,1:26:33.33:0,33,401	0/0:6,0:6:14.91:0,15,109
chr10	99723876	.	CACTT	C	9756.91	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=16.033;DP=685;FS=12.077;HRun=0;HaplotypeScore=112.2383;InbreedingCoeff=0.9877;MQ=79.32;MQ0=0;MQRankSum=-4.104;QD=50.29;ReadPosRankSum=-1.449;VQSLOD=4.8394;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.33:0,96,2620	0/0:9,0:9:27.09:0,27,718	0/0:22,0:22:63.21:0,63,1562	0/0:12,0:12:33.08:0,33,781	0/0:38,0:38:99:0,114,3068	0/0:23,0:23:66.23:0,66,1770	0/0:12,0:12:36.12:0,36,961	1/1:3,37:40:99:2059,111,0	0/0:26,0:26:78.27:0,78,2135	0/0:37,0:37:99:0,108,2865	0/0:25,0:25:69.24:0,69,1836	0/0:31,0:31:90.31:0,90,2432	0/0:20,0:20:60.21:0,60,1635	0/0:24,0:24:69.24:0,69,1866	0/0:28,0:28:81.28:0,81,2162	0/0:28,0:28:84.29:0,84,2290	0/0:17,0:17:48.16:0,48,1303	0/0:21,0:21:60.21:0,60,1617	1/1:0,24:24:72.19:1292,72,0	1/1:2,33:35:96.33:1834,96,0	1/1:0,24:24:57.20:1103,57,0	0/0:25,0:25:75.26:0,75,2053	0/0:22,0:22:66.23:0,66,1800	0/0:22,0:22:66.23:0,66,1776	0/0:17,0:17:48.15:0,48,1248	1/1:4,29:33:18.37:1668,18,0	1/1:1,32:33:84.29:1628,84,0	1/1:0,5:5:9.03:173,9,0
chr10	99727537	.	G	GT	1426.70	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.571;DP=556;FS=3.307;HRun=9;HaplotypeScore=54.9463;InbreedingCoeff=0.9534;MQ=75.73;MQ0=0;MQRankSum=-0.021;QD=22.29;ReadPosRankSum=-0.281;VQSLOD=4.3287;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,38:42:96.26:1062,96,0	0/0:8,0:8:11.99:0,12,104	0/0:20,0:19:27.14:0,27,225	0/0:18,0:17:12.89:0,13,225	0/0:23,1:23:37.53:0,38,481	1/1:4,17:22:24.91:486,25,0	0/0:9,0:9:17.99:0,18,156	0/0:33,0:33:80.93:0,81,696	0/0:15,0:15:38.58:0,39,322	0/0:17,1:18:17.81:0,18,384	0/0:13,0:13:38.99:0,39,339	0/0:19,0:19:47.98:0,48,416	0/0:16,0:16:44.96:0,45,386	0/0:21,0:21:53.94:0,54,462	0/0:24,0:23:59.98:0,60,521	0/0:27,0:27:65.96:0,66,573	0/0:24,0:24:68.98:0,69,598	0/0:20,0:20:47.94:0,48,410	0/0:31,0:31:59.95:0,60,520	0/0:24,0:24:56.94:0,57,490	0/0:19,0:19:50.99:0,51,443	0/0:13,0:13:26.96:0,27,230	0/0:13,0:14:32.02:0,32,266	0/0:14,0:14:35.98:0,36,312	0/0:19,0:19:50.97:0,51,443	0/0:15,0:15:35.99:0,36,312	0/0:24,0:24:71.94:0,72,618	0/0:10,0:10:14.99:0,15,130
chr10	99727951	.	AT	A	1127.89	PASS	AB=0.829;AC=18;AF=0.321;AN=56;BaseQRankSum=3.418;DP=398;FS=6.088;HRun=14;HaplotypeScore=51.8260;InbreedingCoeff=0.4636;MQ=76.98;MQ0=0;MQRankSum=1.374;QD=6.60;ReadPosRankSum=1.607;VQSLOD=2.1020;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:21.45:0,21,320	0/0:10,0:10:30.03:0,30,279	0/1:12,0:11:3.80:4,0,106	0/0:15,0:14:6.17:0,6,93	0/0:23,2:25:12.69:0,13,375	0/0:20,1:22:39.27:0,39,476	0/0:12,1:13:9.40:0,9,219	0/1:13,15:31:1.11:230,0,1	0/0:10,1:12:9.19:0,9,198	0/0:12,1:13:16.81:0,17,136	0/1:10,1:15:6.88:7,0,196	0/0:8,1:9:6.44:0,6,199	0/0:17,0:17:31.23:0,31,264	0/0:11,0:11:27.01:0,27,243	0/0:15,1:16:9.44:0,9,227	0/1:11,1:11:16.54:17,0,123	1/1:1,8:9:17.85:123,18,0	0/0:12,2:15:1.65:0,2,142	1/1:3,9:13:31.70:207,32,0	1/1:5,4:10:16.79:108,17,0	1/1:2,2:4:2.90:20,3,0	0/0:8,0:8:10.79:0,11,81	0/1:9,1:11:2.94:3,0,153	0/0:11,0:11:21.01:0,21,191	0/0:10,0:10:17.57:0,18,167	1/1:9,20:29:9.67:353,10,0	0/1:4,13:17:42.79:170,0,43	1/1:3,4:7:8.92:62,9,0
chr10	99730769	.	ATT	A	479.61	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.171;DP=432;FS=1.114;HRun=4;HaplotypeScore=46.2588;InbreedingCoeff=0.9761;MQ=73.44;MQ0=1;MQRankSum=0.030;QD=29.98;ReadPosRankSum=0.310;VQSLOD=2.3266;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.14:0,42,786	0/0:7,0:7:21.07:0,21,393	0/0:8,0:8:24.08:0,24,428	0/0:6,0:6:18.06:0,18,334	0/0:22,0:22:63.21:0,63,1145	0/0:21,0:21:57.19:0,57,1033	0/0:8,0:8:24.08:0,24,450	0/0:31,0:31:87.28:0,87,1556	1/1:1,15:15:39.13:574,39,0	0/0:22,0:22:66.23:0,66,1233	0/0:23,0:23:69.24:0,69,1286	0/0:20,0:20:57.20:0,57,1068	0/0:9,0:9:27.08:0,27,474	0/0:18,0:18:54.19:0,54,1012	0/0:13,0:13:39.13:0,39,703	0/0:17,0:17:48.16:0,48,878	0/0:17,0:17:51.17:0,51,956	0/0:12,0:12:36.12:0,36,674	0/0:18,0:18:51.15:0,51,918	0/0:10,0:10:30.10:0,30,557	0/0:7,0:7:21.07:0,21,394	0/0:11,0:11:33.11:0,33,618	0/0:18,0:18:54.19:0,54,1012	0/0:11,0:11:33.11:0,33,618	0/0:28,0:28:84.29:0,84,1574	0/0:19,0:19:54.19:0,54,1012	0/0:16,0:16:48.15:0,48,863	0/0:8,0:8:24.08:0,24,449
chr10	99732120	.	GA	G	549.27	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.840;DP=518;FS=1.812;HRun=6;HaplotypeScore=48.2064;InbreedingCoeff=0.9745;MQ=76.19;MQ0=0;MQRankSum=-2.071;QD=24.97;ReadPosRankSum=1.186;VQSLOD=3.5082;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.15:0,45,592	0/0:8,0:8:21.06:0,21,263	0/0:10,0:10:22.02:0,22,250	0/0:13,0:13:26.41:0,26,289	0/0:24,0:24:66.19:0,66,839	0/0:29,0:29:75.24:0,75,974	0/0:12,0:12:30.08:0,30,369	0/0:36,0:36:96.27:0,96,1189	0/0:24,0:24:66.20:0,66,853	0/0:32,0:32:90.28:0,90,1161	0/0:20,0:20:54.18:0,54,710	0/0:22,0:22:63.14:0,63,757	0/0:16,0:16:42.12:0,42,538	0/0:17,0:17:48.16:0,48,632	0/0:21,0:21:63.20:0,63,815	0/0:15,0:15:42.12:0,42,525	1/1:0,22:22:60.15:644,60,0	0/0:12,0:12:36.10:0,36,457	0/0:12,0:12:36.11:0,36,460	0/0:24,0:24:69.22:0,69,907	0/0:11,0:11:27.09:0,27,355	0/0:22,0:22:66.21:0,66,852	0/0:17,0:17:51.17:0,51,670	0/0:14,0:14:39.13:0,39,512	0/0:18,0:18:51.15:0,51,644	0/0:22,0:22:66.21:0,66,856	0/0:24,0:24:69.19:0,69,866	0/0:5,0:5:15.04:0,15,183
chr10	99732541	.	A	AC	7061.15	PASS	AB=0.558;AC=9;AF=0.161;AN=56;BaseQRankSum=14.811;DP=828;FS=18.262;HRun=0;HaplotypeScore=83.1175;InbreedingCoeff=0.2886;MQ=55.34;MQ0=64;MQRankSum=0.092;QD=30.05;ReadPosRankSum=1.671;VQSLOD=3.5881;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,1:18:9.82:0,10,591	0/0:13,0:13:39.13:0,39,544	0/0:41,0:3:5.98:0,6,62	0/0:21,0:1:3.01:0,3,42	0/0:34,0:33:90.30:0,90,1259	0/0:14,0:14:42.14:0,42,587	0/0:27,0:22:66.13:0,66,862	0/1:5,15:7:50.51:151,0,51	0/0:39,0:39:99:0,117,1622	0/0:37,0:32:93.31:0,93,1289	0/0:24,0:23:66.21:0,66,908	0/0:41,0:41:99:0,120,1663	0/0:28,0:28:84.28:0,84,1171	0/0:36,0:36:99:0,108,1511	0/0:43,0:42:99:0,126,1747	0/0:45,0:45:99:0,135,1844	0/0:15,0:14:39.13:0,39,545	0/0:17,0:17:48.16:0,48,671	1/1:5,18:19:15.22:821,15,0	0/1:5,26:31:99:1143,0,116	0/1:10,49:57:99:1551,0,167	0/0:28,0:26:78.19:0,78,1033	0/0:25,0:25:72.23:0,72,992	0/0:27,0:27:78.24:0,78,1059	0/0:20,0:20:60.20:0,60,839	0/1:9,28:35:99:1138,0,272	0/1:11,40:50:99:1635,0,239	1/1:0,14:14:39.13:623,39,0
chr10	99732670	.	AC	A	5003.16	PASS	AB=0.687;AC=16;AF=0.286;AN=56;BaseQRankSum=15.909;DP=719;FS=2.524;HRun=1;HaplotypeScore=84.5507;InbreedingCoeff=0.6164;MQ=64.16;MQ0=7;MQRankSum=-3.514;QD=26.61;ReadPosRankSum=0.753;VQSLOD=4.7747;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:30.06:397,30,0	0/0:14,0:14:42.14:0,42,671	0/0:31,2:21:22.10:0,22,898	0/0:32,2:33:4.14:0,4,1177	0/0:33,0:33:99:0,99,1533	1/1:0,8:8:21.07:294,21,0	0/0:37,0:37:99:0,111,1747	0/1:25,3:28:99:112,0,1019	0/0:29,0:29:87.27:0,87,1344	0/0:51,0:50:99:0,150,2354	0/0:15,0:15:45.14:0,45,693	0/0:38,0:38:99:0,111,1749	0/0:35,0:35:99:0,105,1623	0/0:37,0:37:99:0,111,1772	0/0:38,0:38:99:0,114,1798	0/0:39,0:39:99:0,117,1870	1/1:0,13:13:39.08:522,39,0	0/0:15,0:14:38.96:0,39,563	0/1:16,7:22:99:211,0,649	1/1:1,24:25:27.04:826,27,0	0/1:4,30:34:50.25:1081,0,50	0/0:17,0:17:51.17:0,51,813	0/0:20,0:20:54.06:0,54,781	0/0:21,0:21:63.20:0,63,977	0/0:25,0:25:75.26:0,75,1199	0/1:3,14:17:47.80:539,0,48	1/1:1,25:26:24.27:894,24,0	1/1:0,3:3:9.03:126,9,0
chr10	99733066	.	TACATAC	T	6773.06	PASS	AB=0.538;AC=17;AF=0.304;AN=56;BaseQRankSum=10.634;DP=402;FS=7.066;HRun=0;HaplotypeScore=87.5785;InbreedingCoeff=0.8529;MQ=62.32;MQ0=0;MQRankSum=-9.172;QD=46.39;ReadPosRankSum=-2.612;VQSLOD=3.7082;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:16:14.88:506,15,0	0/0:11,0:11:33.11:0,33,1148	0/0:6,0:4:6.15:0,6,27	0/0:5,0:3:2.99:0,3,24	0/0:23,0:23:69.21:0,69,2247	1/1:0,11:11:18.06:441,18,0	0/0:6,0:6:18.05:0,18,539	1/1:0,34:34:99:1988,99,0	0/0:8,0:8:24.08:0,24,764	0/0:21,0:21:63.19:0,63,1973	0/0:26,0:26:78.25:0,78,2603	0/0:12,0:12:33.11:0,33,1147	0/0:16,0:16:45.14:0,45,1504	0/0:14,0:14:42.14:0,42,1405	0/0:7,0:7:18.06:0,18,597	0/0:17,0:17:51.18:0,51,1868	0/0:27,0:27:78.21:0,78,1927	0/0:10,0:10:30.10:0,30,1053	1/1:2,17:19:51.15:1113,51,0	1/1:0,15:15:12.04:294,12,0	1/1:0,7:7:12.04:294,12,0	0/0:6,0:6:18.06:0,18,562	0/0:12,0:12:33.11:0,33,1096	0/0:9,0:9:27.09:0,27,824	0/0:20,0:20:57.20:0,57,2018	0/1:3,18:21:99:1060,0,160	1/1:1,14:15:27.09:662,27,0	1/1:1,7:8:18.06:414,18,0
chr10	99734011	.	TACACACACACACACACACACACACACAC	T	7812.04	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=11.162;DP=598;FS=26.357;HRun=0;HaplotypeScore=367.6390;InbreedingCoeff=0.9176;MQ=68.23;MQ0=4;MQRankSum=-4.033;QD=53.88;ReadPosRankSum=0.738;VQSLOD=2.6113;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:41:28.72:0,29,1264	0/0:4,0:4:3.01:0,3,134	0/0:27,0:19:42.14:0,42,1071	0/0:39,0:31:66.22:0,66,1772	0/0:13,0:16:42.14:0,42,3484	0/0:10,0:26:24.55:0,25,1364	0/0:20,0:22:57.19:0,57,3233	1/1:5,15:19:45.14:1009,45,0	0/0:9,0:12:36.09:0,36,2131	0/0:30,0:32:81.28:0,81,5625	0/0:9,0:11:23.76:0,24,2132	0/0:16,0:16:39.13:0,39,2341	0/0:19,0:20:47.36:0,47,3952	0/0:17,0:18:36.09:0,36,2878	0/0:18,0:18:42.14:0,42,2783	0/0:25,0:27:66.72:0,67,5104	0/0:17,0:32:29.98:0,30,1167	0/0:14,0:16:39.13:0,39,2895	1/1:6,22:28:63.21:2747,63,0	1/1:4,15:18:15.05:1080,15,0	0/1:23,0:22:0:0,0,1	0/0:12,0:12:33.11:0,33,2278	0/0:15,0:15:33.11:0,33,2931	0/0:23,0:25:63.22:0,63,5435	0/0:20,0:20:54.16:0,54,2662	1/1:2,15:17:22.34:1233,22,0	1/1:1,28:29:13.57:861,14,0	1/1:2,7:8:12.04:882,12,0
chr10	99734020	.	A	AG	1673.12	PASS	AB=0.838;AC=11;AF=0.196;AN=56;BaseQRankSum=9.800;DP=664;FS=17.107;HRun=0;HaplotypeScore=141.6289;InbreedingCoeff=0.7656;MQ=56.49;MQ0=10;MQRankSum=-1.701;QD=13.07;ReadPosRankSum=3.094;VQSLOD=3.6913;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:46.70:0,47,593	0/0:3,0:3:9.03:0,9,123	0/0:37,0:20:54.18:0,54,734	0/0:49,0:26:75.25:0,75,1036	0/0:23,0:23:54.11:0,54,725	0/0:27,0:26:23.80:0,24,274	0/0:30,0:30:79.06:0,79,1039	1/1:18,0:15:42.14:668,42,0	0/0:17,0:17:47.92:0,48,555	0/0:34,0:34:93.17:0,93,1228	0/0:16,0:16:39.13:0,39,541	0/0:18,0:18:45.12:0,45,585	0/0:21,0:21:54.03:0,54,667	0/0:24,0:22:59.94:0,60,722	0/0:23,0:23:54.10:0,54,710	0/0:27,0:27:72.56:0,73,937	0/0:30,0:30:25.10:0,25,308	0/0:19,0:18:50.97:0,51,637	1/1:22,0:22:26.58:590,27,0	0/1:16,0:15:3.01:59,0,3	0/1:1,19:19:0:0,0,1	0/0:17,0:17:39.04:0,39,499	0/0:21,0:21:45.15:0,45,623	0/0:30,0:29:75.13:0,75,993	0/0:24,0:24:52.45:0,52,806	1/1:15,1:16:25.76:432,26,0	0/1:28,0:28:1.21:29,0,1	1/1:8,0:7:1.52:52,2,0
chr10	99734030	.	A	AG	510.37	PASS	AB=0.909;AC=9;AF=0.161;AN=56;BaseQRankSum=7.261;DP=704;FS=11.094;HRun=0;HaplotypeScore=149.7280;InbreedingCoeff=0.4503;MQ=50.88;MQ0=16;MQRankSum=-4.626;QD=4.02;ReadPosRankSum=3.522;VQSLOD=2.8842;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:48.49:0,48,580	0/0:6,0:6:15.05:0,15,207	0/0:49,0:19:45.11:0,45,577	0/0:61,0:21:51.17:0,51,702	0/0:24,0:24:61.67:0,62,795	0/0:29,0:28:22.84:0,23,242	0/0:29,0:29:77.66:0,78,1006	1/1:18,0:15:14.49:234,14,0	0/0:15,0:15:41.94:0,42,510	0/0:32,0:32:90.16:0,90,1202	0/0:17,0:17:42.14:0,42,584	0/0:20,0:20:54.16:0,54,725	0/0:20,0:20:57.12:0,57,758	0/0:25,0:23:59.44:0,59,782	0/0:26,0:26:69.16:0,69,933	0/0:30,0:30:78.58:0,79,1017	0/0:29,0:29:20.53:0,21,265	0/0:20,0:19:53.93:0,54,640	0/1:23,0:22:11.45:256,0,11	1/1:16,0:15:1.41:31,1,0	0/1:3,15:16:0:0,0,1	0/0:20,0:19:48.07:0,48,622	0/0:23,0:23:51.17:0,51,709	0/0:37,0:36:96.18:0,96,1264	0/0:19,0:19:54.11:0,54,708	0/1:16,0:16:40.13:87,0,40	0/1:28,0:28:5.25:7,0,5	0/1:8,0:7:3.68:27,0,4
chr10	99734033	.	C	CAT	129.93	PASS	AB=1.000;AC=8;AF=0.148;AN=54;BaseQRankSum=8.290;DP=710;FS=2.612;HRun=0;HaplotypeScore=164.2161;InbreedingCoeff=0.1057;MQ=50.54;MQ0=16;MQRankSum=-4.870;QD=0.94;ReadPosRankSum=3.674;VQSLOD=2.7897;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:5.06:0,5,255	0/0:6,0:6:17.98:0,18,149	0/0:50,0:17:44.47:0,44,333	0/0:63,0:20:45.01:0,45,415	0/0:23,0:23:59.22:0,59,616	0/1:29,0:28:3.15:3,0,91	0/0:28,0:28:74.71:0,75,709	1/1:18,0:15:8.66:57,9,0	0/0:16,0:16:43.29:0,43,401	0/0:33,0:33:85.25:0,85,920	0/0:18,0:18:44.95:0,45,448	0/0:19,0:19:15.93:0,16,447	0/0:22,0:22:56.28:0,56,585	0/0:26,0:24:65.85:0,66,549	0/0:26,0:26:68.74:0,69,665	0/0:30,0:30:77.99:0,78,828	0/0:30,0:30:2.47:0,2,126	0/0:19,0:18:28.57:0,29,475	0/1:23,0:22:60.17:62,0,60	0/1:16,0:15:13.70:30,0,14	./.	0/0:19,0:18:41.97:0,42,423	0/0:25,0:25:53.05:0,53,567	0/0:35,0:34:93.79:0,94,919	0/0:19,0:19:37.66:0,38,434	0/1:16,0:16:30.20:65,0,30	0/1:28,0:28:9.96:10,0,12	0/1:8,0:7:16.37:31,0,16
chr10	99734779	.	T	TTTTTG	2316.11	PASS	AB=0.711;AC=5;AF=0.089;AN=56;BaseQRankSum=-6.404;DP=728;FS=0.000;HRun=0;HaplotypeScore=132.4198;InbreedingCoeff=0.6757;MQ=65.47;MQ0=5;MQRankSum=0.490;QD=28.59;ReadPosRankSum=-0.079;VQSLOD=3.1764;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:42:53.63:0,54,582	0/0:11,0:11:18.05:0,18,292	0/0:30,0:17:5.98:0,6,79	0/0:27,0:15:3.01:0,3,48	0/0:33,0:33:63.10:0,63,1072	0/0:6,0:30:36.14:0,36,543	0/0:26,0:26:39.13:0,39,689	0/0:19,0:18:12.03:0,12,186	1/1:9,18:27:42.14:1168,42,0	0/0:29,0:29:36.12:0,36,640	0/0:16,0:16:26.99:0,27,408	0/0:23,0:23:51.17:0,51,892	0/0:23,0:23:36.05:0,36,528	0/0:20,0:20:33.10:0,33,559	0/0:18,0:18:30.08:0,30,480	0/0:24,0:24:54.17:0,54,910	1/1:9,16:27:36.12:959,36,0	0/1:16,9:27:38.43:319,0,38	0/0:30,0:29:15.05:0,15,267	0/0:28,0:28:30.10:0,30,527	0/0:32,0:32:39.12:0,39,660	0/0:21,0:21:31.49:0,31,530	0/0:31,0:31:59.57:0,60,1007	0/0:27,0:26:45.15:0,45,797	0/0:29,0:29:54.18:0,54,950	0/0:28,0:28:45.14:0,45,774	0/0:29,0:28:63.17:0,63,1006	0/0:20,0:19:33.11:0,33,585
chr10	99735263	.	G	GTCTC	1257.73	PASS	AB=0.541;AC=5;AF=0.089;AN=56;BaseQRankSum=7.854;DP=694;FS=3.918;HRun=0;HaplotypeScore=145.7553;InbreedingCoeff=0.7485;MQ=85.69;MQ0=4;MQRankSum=-4.940;QD=19.35;ReadPosRankSum=-0.069;VQSLOD=3.5388;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,9:28:39.05:733,39,0	0/0:6,0:6:7.84:0,8,107	0/0:62,0:42:64.92:0,65,768	0/0:78,0:51:15.78:0,16,412	0/0:26,0:26:60.14:0,60,933	1/1:9,8:16:30.10:557,30,0	0/0:13,0:13:33.05:0,33,477	0/0:42,0:40:81.02:0,81,1138	0/0:24,0:24:57.07:0,57,858	0/0:19,0:19:42.11:0,42,654	0/0:18,0:18:39.11:0,39,605	0/0:20,0:20:42.04:0,42,678	0/0:18,0:18:36.12:0,36,603	0/0:15,0:15:27.08:0,27,434	0/0:22,0:21:51.16:0,51,827	0/0:23,0:23:54.18:0,54,886	0/1:3,0:20:57.78:97,0,58	0/0:12,0:12:24.04:0,24,370	0/0:22,0:22:36.11:0,36,559	0/0:24,0:24:59.90:0,60,892	0/0:33,0:33:72.02:0,72,1218	0/0:18,0:18:36.11:0,36,585	0/0:22,0:22:48.01:0,48,721	0/0:28,0:28:75.17:0,75,1188	0/0:16,0:16:25.11:0,25,511	0/0:25,0:25:51.17:0,51,851	0/0:32,0:33:84.09:0,84,1301	0/0:8,0:8:24.08:0,24,374
chr10	99735351	.	G	GTC	938.68	PASS	AB=0.776;AC=4;AF=0.071;AN=56;BaseQRankSum=-0.417;DP=694;FS=0.794;HRun=0;HaplotypeScore=96.6720;InbreedingCoeff=0.4819;MQ=53.17;MQ0=31;MQRankSum=1.353;QD=9.11;ReadPosRankSum=1.223;VQSLOD=3.1475;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:33:35.70:586,36,0	0/0:4,0:4:12.04:0,12,148	0/1:47,0:6:9.44:9,0,29	0/0:116,0:27:7.52:0,8,74	0/0:19,0:17:39.07:0,39,449	0/1:4,17:21:6.04:455,0,6	0/0:17,0:17:27.08:0,27,335	0/0:40,0:41:74.86:0,75,864	0/0:23,0:24:54.66:0,55,662	0/0:19,0:19:46.36:0,46,531	0/0:17,0:17:33.10:0,33,406	0/0:17,0:17:32.77:0,33,380	0/0:26,0:26:62.88:0,63,771	0/0:22,0:22:57.18:0,57,703	0/0:21,0:20:42.07:0,42,504	0/0:24,0:24:54.17:0,54,664	0/0:19,0:19:33.10:0,33,401	0/0:15,0:15:24.05:0,24,281	0/0:14,0:11:24.07:0,24,294	0/0:19,1:20:13.68:0,14,155	0/0:19,0:21:17.57:0,18,197	0/0:19,0:19:44.97:0,45,528	0/0:12,0:12:33.10:0,33,406	0/0:35,0:35:63.04:0,63,770	0/0:18,0:19:41.90:0,42,474	0/0:18,0:18:42.12:0,42,506	0/0:24,0:24:32.93:0,33,404	0/0:6,0:5:6.02:0,6,74
chr10	99735379	.	GTCTCTCTCTC	G	622.35	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=6.106;DP=609;FS=3.099;HRun=0;HaplotypeScore=148.0774;InbreedingCoeff=0.6907;MQ=48.78;MQ0=44;MQRankSum=-4.362;QD=6.91;ReadPosRankSum=-4.501;VQSLOD=1.0808;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:15.05:0,15,617	0/0:5,0:5:9.03:0,9,298	0/0:44,0:5:6.49:0,6,114	0/0:79,0:15:18.06:0,18,441	0/0:20,0:19:27.09:0,27,991	0/0:23,0:23:21.51:0,22,454	0/0:12,0:12:5.75:0,6,41	1/1:33,0:32:25.21:264,25,0	0/0:19,0:19:18.53:0,19,486	0/0:16,0:15:27.09:0,27,978	0/0:17,0:16:9.03:0,9,334	0/0:16,0:15:15.52:0,16,637	0/0:28,0:29:55.06:0,55,1902	0/0:18,0:18:27.74:0,28,1037	0/0:13,0:13:18.53:0,19,653	0/0:24,0:24:30.56:0,31,1223	0/0:11,0:13:12.04:0,12,286	0/0:12,0:12:21.07:0,21,463	1/1:11,0:8:1.55:4,2,0	0/0:23,0:23:0.47:0,0,1	0/0:15,7:18:0.47:0,0,1	0/0:17,0:17:15.05:0,15,464	0/0:13,0:13:18.06:0,18,771	0/0:28,0:33:42.61:0,43,1595	0/0:19,0:19:24.08:0,24,1122	0/1:20,0:18:2.43:247,0,2	1/1:13,6:19:5.99:123,6,0	1/1:7,0:6:10.58:120,11,0
chr10	99735400	.	TCTCTCTCTCTCACACACA	T	1781.31	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=6.987;DP=514;FS=0.658;HRun=0;HaplotypeScore=174.8790;InbreedingCoeff=0.8305;MQ=41.99;MQ0=50;MQRankSum=-5.772;QD=25.09;ReadPosRankSum=-1.156;VQSLOD=2.6629;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:23:15.05:0,15,681	0/0:7,0:6:15.05:0,15,614	0/0:23,0:4:6.91:0,7,128	0/0:33,0:8:18.06:0,18,428	0/0:22,0:19:30.10:0,30,1224	0/0:20,0:17:18.68:0,19,425	0/0:17,0:14:6.45:0,6,62	1/1:5,18:22:45.06:635,45,0	0/0:22,0:20:33.07:0,33,856	0/0:15,0:14:42.14:0,42,1762	0/0:12,0:11:12.04:0,12,572	0/0:19,0:18:33.58:0,34,1353	0/0:27,0:26:74.01:0,74,2671	0/0:17,0:17:36.88:0,37,1429	0/0:14,0:14:30.57:0,31,1160	0/0:18,0:18:36.58:0,37,1524	0/0:13,0:12:2.62:0,3,307	0/0:13,0:10:23.67:0,24,578	1/1:6,0:3:6.02:113,6,0	./.	0/0:16,0:11:0:0,0,0	0/0:13,0:13:18.95:0,19,754	0/0:14,0:13:21.07:0,21,977	0/0:34,0:32:55.13:0,55,2284	0/0:20,0:20:36.12:0,36,1624	1/1:6,14:17:17.70:508,18,0	1/1:17,0:17:17.36:454,17,0	1/1:5,0:4:10.59:232,11,0
chr10	99735410	.	TCACACACA	T	1052.03	PASS	AC=14;AF=0.292;AN=48;BaseQRankSum=7.946;DP=459;FS=5.703;HRun=0;HaplotypeScore=118.4700;InbreedingCoeff=0.8134;MQ=43.48;MQ0=32;MQRankSum=-7.166;QD=11.95;ReadPosRankSum=0.416;VQSLOD=2.2494;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:19:5.94:0,6,42	0/0:7,0:7:8.98:0,9,208	./.	./.	0/0:21,0:19:21.07:0,21,362	1/1:15,0:14:7.59:53,8,0	0/0:18,0:15:2.40:0,2,96	1/1:19,0:18:32.26:358,32,0	0/0:24,0:22:18.19:0,18,434	0/0:16,0:16:42.05:0,42,955	0/0:10,0:10:12.04:0,12,265	0/0:21,0:20:33.10:0,33,725	0/0:30,0:29:74.23:0,74,1136	0/0:15,0:15:25.62:0,26,494	0/0:15,0:15:23.87:0,24,539	0/0:18,0:18:24.54:0,25,446	1/1:12,0:11:0.99:12,1,0	0/0:18,0:15:13.25:0,13,211	1/1:2,1:2:6.02:108,6,0	./.	./.	0/0:12,0:12:15.01:0,15,337	0/0:15,0:14:20.93:0,21,426	0/0:35,0:33:40.34:0,40,816	0/0:19,0:19:33.08:0,33,568	1/1:17,0:15:25.73:277,26,0	1/1:12,2:15:18.06:318,18,0	1/1:4,0:4:6.49:91,6,0
chr10	99735427	.	TAC	T	431.94	PASS	AB=0.971;AC=22;AF=0.458;AN=48;BaseQRankSum=3.887;DP=487;FS=4.790;HRun=0;HaplotypeScore=98.4619;InbreedingCoeff=-0.1331;MQ=43.07;MQ0=37;MQRankSum=-0.321;QD=1.24;ReadPosRankSum=1.997;VQSLOD=1.4218;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:18:0:0,0,0	0/1:9,0:9:17.72:18,0,28	./.	./.	0/1:26,0:23:30.03:30,0,52	0/1:17,0:15:0:0,0,0	0/0:24,0:19:19.54:0,20,198	0/0:18,0:16:0.47:0,0,1	1/1:23,1:21:19.30:188,19,0	0/1:21,0:21:4.99:5,0,133	0/1:13,0:13:7.26:13,0,7	0/0:25,0:23:9.86:0,10,256	0/1:31,0:30:39.15:39,0,82	0/0:9,0:9:9.73:0,10,105	0/1:20,0:20:7.83:8,0,196	0/1:18,0:18:52.47:52,0,81	0/0:11,0:10:2.96:0,3,19	0/1:12,7:16:10.12:37,0,10	1/1:4,0:4:2.84:14,3,0	./.	./.	0/0:11,0:11:7.26:0,7,112	0/1:23,0:22:13.48:13,0,104	0/1:33,0:31:64.92:65,0,88	0/1:22,0:21:13.46:13,0,147	0/1:21,0:17:7.70:8,0,19	1/1:11,0:16:10.05:52,10,0	1/1:3,0:4:2.80:13,3,0
chr10	99736028	.	GA	G	1697.83	PASS	AB=0.720;AC=18;AF=0.333;AN=54;BaseQRankSum=1.096;DP=428;FS=10.004;HRun=8;HaplotypeScore=87.6501;InbreedingCoeff=0.7249;MQ=38.53;MQ0=29;MQRankSum=-3.989;QD=10.29;ReadPosRankSum=2.598;VQSLOD=1.5908;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,12:18:7.16:211,7,0	0/0:6,0:6:6.02:0,6,72	0/0:1,0:1:2.97:0,3,20	./.	0/0:21,0:20:30.09:0,30,361	0/1:3,6:8:4.57:93,0,5	0/0:6,0:6:8.99:0,9,92	1/1:4,11:14:32.94:318,33,0	0/0:16,0:15:21.54:0,22,254	0/0:22,0:20:38.11:0,38,423	0/0:19,0:17:33.05:0,33,365	0/0:10,0:9:11.77:0,12,121	0/0:14,0:14:35.89:0,36,402	0/0:19,0:18:32.76:0,33,340	0/0:23,0:21:53.76:0,54,575	0/0:12,0:10:27.04:0,27,284	0/1:17,4:16:21.02:67,0,21	0/0:14,0:14:26.87:0,27,271	1/1:6,8:11:24.03:231,24,0	1/1:4,15:18:36.04:346,36,0	1/1:9,4:8:2.98:29,3,0	0/0:22,0:21:41.93:0,42,454	0/0:24,0:22:38.99:0,39,416	0/0:18,0:17:18.06:0,18,218	0/0:15,0:15:26.67:0,27,265	1/1:7,15:20:39.03:374,39,0	1/1:18,6:21:20.41:195,20,0	1/1:8,0:4:2.97:23,3,0
chr10	99737440	.	GAAC	G	1830.36	PASS	AC=12;AF=0.240;AN=50;BaseQRankSum=7.816;DP=456;FS=23.034;HRun=0;HaplotypeScore=60.7934;InbreedingCoeff=0.9607;MQ=46.23;MQ0=19;MQRankSum=-8.064;QD=27.32;ReadPosRankSum=2.437;VQSLOD=1.7623;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:31:48.14:0,48,955	0/0:7,0:6:18.04:0,18,355	./.	./.	0/0:12,0:12:18.06:0,18,383	0/0:18,0:16:27.09:0,27,570	0/0:32,0:21:42.14:0,42,882	1/1:6,5:5:15.05:233,15,0	0/0:19,0:18:39.13:0,39,853	0/0:19,0:19:57.17:0,57,1207	0/0:15,0:15:33.05:0,33,711	0/0:18,0:18:33.11:0,33,727	0/0:25,0:24:42.14:0,42,926	0/0:12,0:11:21.07:0,21,464	0/0:23,0:22:33.11:0,33,694	0/0:19,0:19:45.15:0,45,982	0/0:26,0:24:17.98:0,18,347	0/0:19,0:19:15.05:0,15,330	1/1:2,8:6:18.06:280,18,0	1/1:0,14:10:27.09:433,27,0	./.	0/0:21,0:21:33.11:0,33,710	0/0:11,0:11:21.07:0,21,463	0/0:32,0:30:27.09:0,27,585	0/0:18,0:17:21.07:0,21,436	1/1:1,12:11:30.10:481,30,0	1/1:1,15:14:30.10:482,30,0	1/1:0,3:2:6.02:96,6,0
chr10	99741437	.	C	CAT	113.25	PASS	AB=1.000;AC=3;AF=0.058;AN=52;BaseQRankSum=-1.955;DP=281;FS=13.620;HRun=0;HaplotypeScore=34.4268;InbreedingCoeff=0.5439;MQ=69.67;MQ0=0;MQRankSum=-0.334;QD=6.66;ReadPosRankSum=-1.655;VQSLOD=1.0219;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:12.04:0,12,150	0/0:6,0:6:15.05:0,15,186	./.	0/1:12,0:7:4.73:5,0,23	0/0:17,0:17:42.13:0,42,525	0/0:14,0:14:18.23:0,18,464	0/0:4,0:4:12.04:0,12,150	0/0:32,1:33:13.60:0,14,657	0/0:6,0:6:18.06:0,18,225	0/0:11,0:11:27.09:0,27,338	0/0:9,0:9:21.07:0,21,263	0/0:4,0:4:9.03:0,9,113	0/0:8,0:8:15.05:0,15,187	0/0:8,0:8:18.06:0,18,225	0/0:7,0:7:15.05:0,15,188	0/0:12,0:12:36.10:0,36,437	1/1:1,4:5:12.04:198,12,0	0/0:14,0:14:39.12:0,39,484	0/0:17,0:17:42.13:0,42,525	0/0:11,0:11:27.09:0,27,337	0/0:5,0:5:12.04:0,12,150	./.	0/0:5,0:5:12.04:0,12,150	0/0:4,0:4:12.04:0,12,150	0/0:15,0:15:45.14:0,45,563	0/0:12,0:12:21.07:0,21,263	0/0:18,0:18:51.16:0,51,637	0/0:14,0:14:27.09:0,27,338
chr10	99742376	.	CT	C	922.03	PASS	AB=0.795;AC=31;AF=0.554;AN=56;BaseQRankSum=-0.341;DP=383;FS=3.886;HRun=17;HaplotypeScore=54.1419;InbreedingCoeff=0.1891;MQ=70.34;MQ0=2;MQRankSum=2.934;QD=3.48;ReadPosRankSum=2.860;VQSLOD=-0.3401;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:13.28:0,13,72	1/1:4,0:4:2.81:16,3,0	0/1:25,0:13:6.33:17,0,6	0/0:9,0:7:0.47:0,0,1	1/1:6,6:14:24.04:126,24,0	0/0:30,0:30:35.14:0,35,197	1/1:3,8:14:26.49:134,26,0	1/1:16,10:28:1:82,1,0	0/1:3,1:7:10.88:18,0,11	0/0:17,0:19:23.62:0,24,169	0/0:11,0:11:12.85:0,13,98	1/1:5,1:7:7.07:29,7,0	1/1:6,0:13:6.12:26,6,0	1/1:12,1:14:2.88:19,3,0	0/1:7,3:11:27.20:39,0,27	0/1:7,5:11:30.42:48,0,30	0/0:5,0:5:7.36:0,7,36	0/1:11,1:12:12.49:38,0,12	1/1:7,3:12:12.63:61,13,0	1/1:6,7:13:19.02:104,19,0	1/1:6,2:9:10.55:55,11,0	0/0:6,0:6:6.87:0,7,50	1/1:2,5:10:15.23:90,15,0	0/1:9,2:12:14.57:18,0,15	0/0:15,1:16:5.03:0,5,122	0/1:12,1:14:16.03:24,0,16	0/1:17,2:20:19.25:80,0,19	0/1:5,6:14:19.44:74,0,19
chr10	99742392	.	T	TTTGAG	752.67	PASS	AB=0.979;AC=6;AF=0.107;AN=56;BaseQRankSum=1.596;DP=390;FS=4.424;HRun=0;HaplotypeScore=82.4581;InbreedingCoeff=0.4503;MQ=67.15;MQ0=3;MQRankSum=-1.827;QD=8.96;ReadPosRankSum=0.700;VQSLOD=1.6791;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,13:27:0.95:234,1,0	0/0:2,0:2:4.56:0,5,46	0/1:22,0:9:10.43:29,0,10	0/0:10,0:8:0.99:0,1,18	0/0:18,0:18:33.16:0,33,678	1/1:9,0:28:26.83:601,27,0	0/0:15,0:15:39.12:0,39,536	0/0:29,0:29:53.35:0,53,715	0/0:7,0:7:15.02:0,15,216	0/0:19,0:19:21.36:0,21,525	0/0:12,0:12:23.97:0,24,364	0/0:8,0:8:20.52:0,21,286	0/0:17,0:17:36.07:0,36,489	0/0:12,0:12:20.76:0,21,288	0/0:9,0:9:22.99:0,23,312	0/0:12,0:11:16.96:0,17,253	0/1:6,0:6:7.44:7,0,122	0/0:9,0:9:12.96:0,13,152	0/0:13,0:13:31.12:0,31,409	0/0:15,0:15:42.04:0,42,602	0/0:8,0:8:21.02:0,21,304	0/0:6,0:6:14.88:0,15,192	0/0:12,0:12:35.13:0,35,463	0/0:8,0:8:14.56:0,15,183	0/0:11,0:11:25.62:0,26,303	0/0:15,0:15:36.01:0,36,540	0/0:20,0:20:44.74:0,45,668	0/0:19,0:19:42.04:0,42,614
chr10	99742612	.	A	AT	153.99	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=2.454;DP=302;FS=0.000;HRun=7;HaplotypeScore=34.7738;InbreedingCoeff=0.4109;MQ=70.16;MQ0=18;MQRankSum=-3.314;QD=17.11;ReadPosRankSum=-0.384;VQSLOD=2.5109;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:20.71:0,21,185	0/0:2,0:2:5.91:0,6,44	0/0:42,0:10:8.86:0,9,105	0/0:45,0:15:14.03:0,14,101	0/0:7,0:6:18.03:0,18,172	0/0:15,0:15:27.04:0,27,260	0/0:7,0:7:18.03:0,18,173	0/0:29,0:27:68.27:0,68,627	0/0:4,0:4:6.01:0,6,58	0/0:7,0:7:13.58:0,14,103	0/0:7,0:7:18.02:0,18,170	0/0:2,0:2:2.99:0,3,23	0/0:5,0:5:9.01:0,9,87	0/0:3,0:3:6.01:0,6,58	0/0:8,0:8:17.99:0,18,170	0/0:8,0:8:20.40:0,20,179	1/1:5,4:9:24:246,24,0	0/0:7,0:7:8.43:0,8,95	0/0:21,0:19:48.79:0,49,447	0/0:3,0:3:9.01:0,9,87	./.	0/0:1,0:1:3:0,3,29	0/0:4,0:4:12.01:0,12,112	0/0:2,0:2:6.01:0,6,59	0/0:12,0:11:27.03:0,27,257	0/0:17,0:17:50.25:0,50,452	0/0:16,0:15:32.84:0,33,288	0/0:3,0:3:6.01:0,6,55
chr10	99743285	.	GTT	G	1438.40	PASS	AB=0.745;AC=18;AF=0.321;AN=56;BaseQRankSum=-2.026;DP=572;FS=1.433;HRun=18;HaplotypeScore=87.5180;InbreedingCoeff=0.3868;MQ=59.28;MQ0=11;MQRankSum=3.058;QD=5.78;ReadPosRankSum=3.162;VQSLOD=-0.5022;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,16:29:54.95:396,55,0	0/0:7,0:8:14.41:0,14,153	0/0:34,1:9:11.90:0,12,85	0/0:30,0:17:5.91:0,6,53	0/0:16,0:17:38.03:0,38,394	1/1:4,8:13:1.63:124,2,0	0/1:9,1:10:4.12:4,0,126	0/1:27,8:38:7.15:168,0,7	0/0:17,1:19:12.82:0,13,280	0/1:14,2:23:30.40:30,0,76	0/1:9,2:20:2.46:2,0,151	0/0:17,0:18:9.80:0,10,173	0/0:15,1:16:1.51:0,2,186	0/0:13,1:13:10.42:0,10,292	0/0:22,1:25:11.77:0,12,350	0/0:12,0:17:26.11:0,26,288	0/0:20,0:26:54.33:0,54,508	0/0:20,0:22:38.40:0,38,390	0/1:12,9:22:27.60:183,0,28	1/1:9,13:21:29.06:249,29,0	1/1:4,4:9:14.53:101,15,0	0/0:16,0:16:11.09:0,11,102	0/0:12,1:17:13.85:0,14,293	0/0:10,0:11:20.73:0,21,223	0/0:25,0:29:48.93:0,49,561	1/1:9,11:23:1.27:175,1,0	0/1:17,5:25:20.62:131,0,21	1/1:7,2:10:5.69:45,6,0
chr10	99744079	.	A	AT	4843.28	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-3.693;DP=495;FS=3.940;HRun=6;HaplotypeScore=51.2566;InbreedingCoeff=0.9978;MQ=83.36;MQ0=0;MQRankSum=-1.762;QD=32.72;ReadPosRankSum=-1.475;VQSLOD=4.5466;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.08:0,45,452	0/0:12,0:12:30.07:0,30,306	0/0:16,0:16:38.65:0,39,367	0/0:13,0:13:27.06:0,27,274	0/0:19,0:19:54.12:0,54,551	0/0:15,0:15:45.10:0,45,459	0/0:17,0:17:48.11:0,48,489	1/1:1,18:19:54.17:679,54,0	0/0:21,0:21:63.14:0,63,642	0/0:28,0:27:78.17:0,78,796	0/0:20,0:20:57.11:0,57,574	0/0:13,0:13:36.08:0,36,367	0/0:20,0:20:57.12:0,57,575	0/0:12,0:12:36.08:0,36,367	0/0:19,0:19:51.11:0,51,520	0/0:14,0:14:39.09:0,39,398	0/0:13,0:12:30.07:0,30,306	0/0:11,0:11:30.06:0,30,306	1/1:2,27:29:81.22:990,81,0	1/1:4,21:25:63.16:775,63,0	1/1:1,7:8:18.06:226,18,0	0/0:12,0:12:33.08:0,33,337	0/0:14,0:14:33.04:0,33,327	0/0:19,0:19:54.10:0,54,544	0/0:23,0:23:66.13:0,66,665	1/1:2,27:29:81.26:1019,81,0	1/1:5,20:25:60.17:739,60,0	1/1:2,11:13:33.11:415,33,0
chr10	99746166	.	TG	T	4610.29	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.527;DP=536;FS=17.833;HRun=4;HaplotypeScore=55.3360;InbreedingCoeff=0.9872;MQ=61.90;MQ0=21;MQRankSum=0.843;QD=29.94;ReadPosRankSum=-1.304;VQSLOD=2.7588;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.14:0,72,948	0/0:6,0:3:9.03:0,9,126	0/0:10,0:8:21.04:0,21,265	0/0:10,0:9:21.03:0,21,266	0/0:20,0:17:45.15:0,45,630	0/0:17,0:16:48.16:0,48,670	0/0:33,0:32:87.18:0,87,1153	1/1:4,26:29:72.21:852,72,0	0/0:15,0:14:42.14:0,42,583	0/0:17,0:14:42.13:0,42,570	0/0:22,0:21:60.19:0,60,821	0/0:10,0:10:24.08:0,24,336	0/0:18,0:18:51.17:0,51,706	0/0:17,0:16:45.15:0,45,629	0/0:15,0:14:39.13:0,39,546	0/0:22,0:21:59.55:0,60,791	0/0:24,0:23:60.13:0,60,815	0/0:31,0:30:84.26:0,84,1154	1/1:2,17:18:48.15:574,48,0	1/1:3,24:25:63.15:740,63,0	1/1:3,22:25:66.20:792,66,0	0/0:11,0:11:30.10:0,30,420	0/0:26,0:26:66.22:0,66,916	0/0:20,0:19:54.18:0,54,756	0/0:12,0:11:30.10:0,30,419	1/1:3,10:11:30.09:360,30,0	1/1:1,27:27:78.24:934,78,0	1/1:1,11:11:30.09:360,30,0
chr10	99747446	.	T	TTAAA	1928.37	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.087;DP=646;FS=0.000;HRun=0;HaplotypeScore=98.3796;InbreedingCoeff=0.9839;MQ=79.02;MQ0=0;MQRankSum=-2.462;QD=74.17;ReadPosRankSum=-0.143;VQSLOD=5.4633;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:48.16:0,48,888	0/0:5,0:5:15.05:0,15,285	0/0:14,0:14:37.84:0,38,693	0/0:16,0:16:45.09:0,45,812	0/0:28,0:28:81.26:0,81,1463	0/0:29,0:29:87.30:0,87,1634	0/0:19,0:19:57.18:0,57,1049	0/0:37,0:37:99:0,111,2066	0/0:20,0:20:51.16:0,51,929	0/0:28,0:28:81.26:0,81,1465	0/0:27,0:27:78.27:0,78,1457	0/0:21,0:21:57.20:0,57,1076	0/0:30,0:30:84.29:0,84,1570	0/0:29,0:29:87.28:0,87,1564	0/0:31,0:31:87.30:0,87,1633	0/0:22,0:22:63.22:0,63,1188	1/1:1,25:26:75.26:2023,75,0	0/0:10,0:10:30.09:0,30,525	0/0:23,0:23:66.19:0,66,1173	0/0:29,0:29:81.28:0,81,1503	0/0:15,0:15:42.14:0,42,773	0/0:23,0:23:69.24:0,69,1295	0/0:22,0:22:63.20:0,63,1164	0/0:21,0:21:60.21:0,60,1139	0/0:30,0:30:87.26:0,87,1562	0/0:30,0:30:84.29:0,84,1569	0/0:25,0:25:75.26:0,75,1409	0/0:20,0:20:60.21:0,60,1139
chr10	99750029	.	TACAC	T	1460.36	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=3.366;DP=601;FS=3.154;HRun=0;HaplotypeScore=111.7075;InbreedingCoeff=0.7809;MQ=67.78;MQ0=4;MQRankSum=0.636;QD=12.59;ReadPosRankSum=1.927;VQSLOD=3.4422;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:24:8.55:9,0,101	0/0:5,0:5:6.02:0,6,95	./.	0/0:26,0:23:0.47:0,0,1	0/0:25,0:27:41.88:0,42,744	0/0:13,0:25:18.05:0,18,321	0/0:24,0:23:24.08:0,24,566	0/0:27,0:27:27.09:0,27,494	0/0:18,0:18:19.29:0,19,382	0/0:22,0:23:25.02:0,25,457	0/0:13,0:12:15.05:0,15,308	0/0:16,0:19:26.83:0,27,539	0/0:16,0:16:34.36:0,34,716	1/1:12,10:22:18.06:283,18,0	0/0:19,0:19:30.05:0,30,653	0/0:13,0:13:18.06:0,18,404	0/0:25,0:24:14.27:0,14,173	0/0:18,0:18:16.29:0,16,396	0/0:20,0:26:41.17:0,41,631	0/0:19,0:31:18.55:0,19,246	0/0:10,0:20:11.50:0,12,149	1/1:9,12:23:29.60:454,30,0	1/1:4,15:20:38.68:590,39,0	1/1:15,11:27:18.06:283,18,0	0/0:16,0:19:32.25:0,32,583	0/0:20,0:32:69.23:0,69,1131	0/0:14,0:22:21.53:0,22,403	0/0:8,0:14:7.24:0,7,67
chr10	99750775	.	T	TA	1380.73	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-5.366;DP=393;FS=3.929;HRun=8;HaplotypeScore=39.3857;InbreedingCoeff=0.9261;MQ=62.52;MQ0=0;MQRankSum=-0.769;QD=24.22;ReadPosRankSum=3.341;VQSLOD=3.9904;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:15:42.12:485,42,0	0/0:5,0:5:12.01:0,12,110	0/0:3,0:3:6.76:0,7,45	0/0:4,0:4:12:0,12,105	0/0:17,0:17:51.03:0,51,467	1/1:2,14:16:33.10:381,33,0	0/0:11,0:11:30.02:0,30,275	0/0:34,0:34:87.03:0,87,793	0/0:12,0:12:33.01:0,33,302	0/0:11,0:11:30.02:0,30,274	0/0:16,0:16:42.02:0,42,384	0/0:16,0:16:45.02:0,45,412	0/0:9,0:9:24:0,24,215	0/0:12,0:12:30.01:0,30,275	0/0:14,0:14:39.02:0,39,356	0/0:12,0:12:26.94:0,27,247	1/1:3,22:25:57.17:658,57,0	0/0:19,0:19:44.98:0,45,404	0/0:21,0:21:51.01:0,51,463	0/0:19,0:19:57.03:0,57,521	0/0:17,0:17:42.02:0,42,384	0/0:4,0:4:9:0,9,82	0/0:9,0:9:27:0,27,242	0/0:9,0:9:27:0,27,241	0/0:11,0:11:30.02:0,30,274	0/0:20,0:20:54.02:0,54,490	0/0:19,0:18:47.92:0,48,439	0/0:12,0:12:36.02:0,36,330
chr10	99752814	.	CT	C	277.78	PASS	AB=0.818;AC=3;AF=0.054;AN=56;BaseQRankSum=5.994;DP=584;FS=4.176;HRun=8;HaplotypeScore=63.9665;InbreedingCoeff=0.5798;MQ=74.72;MQ0=2;MQRankSum=-1.324;QD=12.63;ReadPosRankSum=-0.939;VQSLOD=2.8692;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.12:0,90,1036	0/0:6,0:6:18.06:0,18,217	0/0:33,0:29:45.74:0,46,642	0/0:38,2:35:4.02:0,4,562	0/0:21,1:22:22.18:0,22,551	0/0:15,0:15:39.11:0,39,461	0/0:24,0:24:63.18:0,63,748	0/0:24,0:24:63.19:0,63,752	0/0:15,0:15:36.10:0,36,425	0/0:21,0:21:60.18:0,60,714	0/0:20,0:20:54.13:0,54,619	0/0:17,0:17:48.13:0,48,559	0/0:20,0:20:51.16:0,51,616	0/0:15,0:15:39.10:0,39,458	0/0:14,0:14:39.12:0,39,471	0/0:17,0:17:48.14:0,48,569	1/1:0,13:13:36.06:347,36,0	0/0:12,0:12:27.08:0,27,326	0/0:23,0:23:66.19:0,66,786	0/0:32,0:32:84.25:0,84,1003	0/0:21,0:21:57.17:0,57,689	0/0:18,0:18:51.16:0,51,616	0/0:21,0:21:60.17:0,60,713	0/0:23,0:22:66.20:0,66,797	0/0:23,0:24:57.04:0,57,667	0/0:23,0:23:69.21:0,69,831	0/0:28,0:29:78.11:0,78,919	0/1:7,2:9:36.89:37,0,160
chr10	99753687	.	GATA	G	806.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.355;DP=447;FS=0.880;HRun=0;HaplotypeScore=60.0031;InbreedingCoeff=0.9390;MQ=73.93;MQ0=0;MQRankSum=-2.301;QD=38.41;ReadPosRankSum=3.553;VQSLOD=4.3521;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.24:0,87,1793	0/0:11,0:11:30.10:0,30,656	0/0:8,0:8:21.07:0,21,449	0/0:8,0:8:18.06:0,18,361	0/0:22,0:22:66.23:0,66,1427	0/0:21,0:21:60.21:0,60,1311	0/0:12,0:12:33.11:0,33,722	0/0:30,0:30:84.27:0,84,1755	0/0:12,0:12:27.09:0,27,590	0/0:28,0:28:81.27:0,81,1734	0/0:18,0:18:48.16:0,48,1049	0/0:12,0:12:36.12:0,36,771	0/0:9,0:9:24.08:0,24,525	0/0:12,0:12:36.12:0,36,786	0/0:14,0:14:42.14:0,42,918	0/0:18,0:18:48.16:0,48,1049	1/1:0,21:21:57.67:901,58,0	0/0:29,0:29:84.26:0,84,1792	0/0:17,0:17:45.13:0,45,941	0/0:15,0:15:45.15:0,45,984	0/0:8,0:8:18.06:0,18,394	0/0:10,0:10:24.07:0,24,484	0/0:16,0:16:39.13:0,39,852	0/0:6,0:6:18.06:0,18,392	0/0:16,0:16:48.16:0,48,1036	0/0:23,0:23:57.19:0,57,1209	0/0:17,0:17:51.18:0,51,1114	0/0:5,0:5:12.04:0,12,260
chr10	99755994	.	A	AC	2523.68	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.362;DP=818;FS=8.214;HRun=3;HaplotypeScore=83.8906;InbreedingCoeff=0.9988;MQ=79.45;MQ0=0;MQRankSum=0.184;QD=35.54;ReadPosRankSum=-0.240;VQSLOD=3.6829;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,40:41:99:1511,108,0	0/0:10,0:10:30.09:0,30,360	0/0:21,0:23:24.96:0,25,560	0/0:20,0:20:45.11:0,45,513	0/0:27,0:27:75.23:0,75,899	1/1:1,29:30:81.27:1134,81,0	0/0:32,0:32:93.26:0,93,1094	0/0:25,0:25:72.19:0,72,823	0/0:33,0:33:99:0,99,1188	0/0:28,0:28:78.24:0,78,936	0/0:22,0:22:60.18:0,60,708	0/0:36,0:36:93.28:0,93,1114	0/0:37,0:37:99:0,108,1294	0/0:34,0:34:87.25:0,87,1032	0/0:49,0:48:99:0,144,1685	0/0:43,0:43:99:0,126,1501	0/0:42,0:42:99:0,123,1452	0/0:25,0:25:72.19:0,72,850	0/0:18,0:18:48.14:0,48,565	0/0:21,0:21:57.17:0,57,683	0/0:49,0:49:99:0,138,1632	0/0:23,0:23:66.15:0,66,775	0/0:25,0:25:69.21:0,69,827	0/0:47,0:47:99:0,141,1672	0/0:16,0:16:36.10:0,36,422	0/0:22,0:22:63.17:0,63,742	0/0:27,0:27:75.17:0,75,861	0/0:13,0:13:39.10:0,39,455
chr10	99756269	.	C	CT	4743.38	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.584;DP=803;FS=0.371;HRun=2;HaplotypeScore=94.3073;InbreedingCoeff=0.9985;MQ=87.18;MQ0=0;MQRankSum=-4.111;QD=39.53;ReadPosRankSum=2.690;VQSLOD=4.8380;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,55:55:99:2115,147,0	0/0:15,0:15:45.14:0,45,558	0/0:31,0:31:87.21:0,87,1037	0/0:26,0:26:69.18:0,69,818	0/0:35,0:35:99:0,105,1301	1/1:2,21:23:66.22:945,66,0	0/0:28,0:28:81.24:0,81,990	0/0:26,0:26:69.20:0,69,835	0/0:17,0:17:48.12:0,48,578	0/0:38,0:38:99:0,111,1363	0/0:29,0:29:84.26:0,84,1041	0/0:26,0:26:75.24:0,75,929	0/0:26,0:26:75.24:0,75,930	0/0:26,0:27:80.45:0,80,961	0/0:40,0:40:99:0,117,1450	0/0:31,0:31:84.24:0,84,1017	1/1:1,41:42:99:1684,117,0	0/0:21,0:21:57.16:0,57,691	0/0:22,0:22:60.19:0,60,742	0/0:25,0:25:72.18:0,72,875	0/0:32,0:32:87.23:0,87,1039	0/0:31,0:31:87.24:0,87,1043	0/0:27,0:27:75.22:0,75,915	0/0:29,0:29:78.20:0,78,949	0/0:33,0:33:99:0,99,1203	0/0:29,0:29:84.26:0,84,1041	0/0:32,0:32:90.27:0,90,1103	0/0:7,0:7:21.07:0,21,260
chr10	99756405	.	CGTTTTG	C	12553.91	PASS	AB=0.548;AC=19;AF=0.339;AN=56;BaseQRankSum=17.725;DP=675;FS=8.052;HRun=0;HaplotypeScore=152.2781;InbreedingCoeff=0.9187;MQ=79.01;MQ0=0;MQRankSum=-18.413;QD=52.75;ReadPosRankSum=0.236;VQSLOD=4.7810;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,29:37:69.19:1544,69,0	0/0:13,0:13:33.11:0,33,1177	0/0:20,0:20:42.09:0,42,1134	0/0:19,0:19:50.66:0,51,1253	0/0:27,0:27:78.27:0,78,2739	1/1:1,22:23:51.18:1204,51,0	0/0:29,0:29:81.26:0,81,2692	1/1:6,22:28:66.22:1527,66,0	0/0:18,0:18:54.19:0,54,1863	0/0:25,0:25:75.25:0,75,2593	0/0:25,0:25:75.26:0,75,2670	0/0:27,0:27:81.28:0,81,2774	0/0:23,0:23:69.24:0,69,2396	0/0:31,0:31:90.31:0,90,3114	0/0:31,0:31:90.31:0,90,3150	0/0:27,0:27:81.28:0,81,2883	1/1:2,19:21:43.39:960,43,0	0/0:22,0:21:66.22:0,66,2278	1/1:5,21:26:63.19:1375,63,0	1/1:1,33:34:87.30:2053,87,0	1/1:3,11:14:24.08:565,24,0	0/0:26,0:26:75.26:0,75,2657	0/0:24,0:24:66.23:0,66,2168	0/0:28,0:28:81.28:0,81,2888	0/0:22,0:22:66.23:0,66,2315	0/1:3,14:17:61.88:917,0,62	1/1:1,31:32:84.29:1983,84,0	1/1:0,6:6:18.06:425,18,0
chr10	99756925	.	G	GGGAT	5888.85	PASS	AB=0.730;AC=15;AF=0.288;AN=52;BaseQRankSum=-8.711;DP=727;FS=11.413;HRun=0;HaplotypeScore=116.4475;InbreedingCoeff=0.7683;MQ=73.52;MQ0=6;MQRankSum=0.145;QD=23.75;ReadPosRankSum=-0.249;VQSLOD=4.0615;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:41.32:0,41,791	0/0:10,0:11:21.06:0,21,307	./.	./.	0/0:26,0:27:60.20:0,60,911	0/0:29,0:29:39.13:0,39,596	0/0:20,0:20:21.06:0,21,300	1/1:38,0:38:5.98:59,6,0	1/1:15,10:26:27.09:624,27,0	0/0:29,0:29:45.15:0,45,690	0/0:17,0:17:30.10:0,30,448	0/0:20,0:20:30.08:0,30,437	0/0:29,0:29:54.17:0,54,808	0/0:29,0:29:45.15:0,45,697	0/0:30,0:29:20.38:0,20,573	0/0:16,0:16:27.08:0,27,394	0/0:15,0:26:9.01:0,9,82	1/1:12,4:17:14.97:292,15,0	1/1:17,10:26:30.08:536,30,0	0/1:17,7:24:53.88:674,0,54	0/1:23,23:49:1.31:942,0,1	0/0:17,0:17:30.09:0,30,444	0/0:27,0:26:42.14:0,42,637	0/0:26,0:27:39.13:0,39,575	0/0:19,0:19:21.07:0,21,325	0/1:20,8:29:1.35:879,0,1	1/1:10,16:27:60.21:1389,60,0	1/1:4,7:11:21.07:493,21,0
chr10	99757044	.	ACTCCAG	A	5192.25	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.653;DP=604;FS=11.752;HRun=0;HaplotypeScore=142.7649;InbreedingCoeff=0.9926;MQ=80.71;MQ0=0;MQRankSum=-11.697;QD=50.41;ReadPosRankSum=-1.379;VQSLOD=4.3204;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.29:0,84,2946	0/0:9,0:9:27.07:0,27,856	0/0:38,0:36:93.27:0,93,2856	0/0:32,0:30:77.97:0,78,2355	0/0:15,0:15:45.15:0,45,1568	0/0:16,0:16:45.15:0,45,1586	0/0:21,0:21:63.19:0,63,2061	1/1:5,13:18:39.10:775,39,0	0/0:23,0:23:69.24:0,69,2429	0/0:26,0:26:75.26:0,75,2612	0/0:17,0:17:51.18:0,51,1790	0/0:30,0:30:90.30:0,90,3024	0/0:21,0:21:57.20:0,57,2000	0/0:23,0:23:63.20:0,63,2065	0/0:28,0:28:78.27:0,78,2672	0/0:26,0:26:72.25:0,72,2498	0/0:32,0:32:90.27:0,90,3050	0/0:16,0:15:45.15:0,45,1522	1/1:6,9:15:21.05:442,21,0	1/1:2,18:20:48.16:1117,48,0	1/1:4,9:13:21.07:459,21,0	0/0:21,0:21:63.20:0,63,2145	0/0:23,0:23:66.23:0,66,2280	0/0:25,0:25:72.25:0,72,2512	0/0:28,0:28:84.29:0,84,2852	1/1:0,13:13:33.09:722,33,0	1/1:0,20:20:60.21:1398,60,0	1/1:0,4:4:12.04:280,12,0
chr10	99757114	.	TACACACACACACAC	T	535.29	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=5.106;DP=630;FS=2.591;HRun=0;HaplotypeScore=215.3272;InbreedingCoeff=0.7976;MQ=63.63;MQ0=15;MQRankSum=-4.577;QD=6.22;ReadPosRankSum=-0.218;VQSLOD=2.7318;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,15:28:12.04:253,12,0	0/0:5,0:5:13.60:0,14,467	./.	0/0:36,0:22:3.48:0,3,99	0/0:20,0:21:36.10:0,36,1713	1/1:10,0:20:12.90:247,13,0	0/0:20,0:19:45.13:0,45,2166	0/0:24,0:22:12.03:0,12,312	0/0:20,0:20:15.05:0,15,631	0/0:24,0:23:46.97:0,47,2223	0/0:10,0:9:15.05:0,15,752	0/0:25,0:25:41.87:0,42,2231	0/0:25,0:25:55.74:0,56,2566	0/0:20,0:20:42.14:0,42,2262	0/0:21,0:21:39.13:0,39,2326	0/0:14,0:13:21.07:0,21,1216	1/1:22,0:34:12.01:165,12,0	0/0:18,0:17:32.14:0,32,1468	0/0:11,0:10:3.01:0,3,150	0/0:26,0:28:54.19:0,54,2691	0/0:18,0:16:15.05:0,15,706	0/0:21,0:21:24.08:0,24,1454	0/0:24,0:23:42.14:0,42,2013	0/0:40,0:41:81.25:0,81,4182	0/0:20,0:20:36.12:0,36,1809	0/0:19,0:18:36.12:0,36,1970	0/0:30,0:29:57.62:0,58,2588	0/0:5,0:5:6.02:0,6,398
chr10	99757386	.	CCAAAACAAAA	C	6342.78	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.008;DP=646;FS=7.935;HRun=0;HaplotypeScore=192.3312;InbreedingCoeff=0.9908;MQ=71.39;MQ0=0;MQRankSum=-8.984;QD=66.07;ReadPosRankSum=-0.273;VQSLOD=3.9235;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:78.27:0,78,3713	0/0:10,0:10:27.09:0,27,1344	0/0:29,0:27:53.31:0,53,2137	0/0:29,0:28:66.18:0,66,2285	0/0:20,0:20:54.18:0,54,2515	0/0:19,0:19:51.17:0,51,2277	0/0:20,0:20:51.16:0,51,2171	1/1:1,16:17:48.16:1219,48,0	0/0:19,0:19:57.19:0,57,2527	0/0:32,0:32:78.22:0,78,3464	0/0:20,0:20:54.15:0,54,2260	0/0:33,0:33:90.31:0,90,4267	0/0:31,0:31:90.30:0,90,3947	0/0:21,0:21:54.17:0,54,2309	0/0:31,0:31:87.29:0,87,3923	0/0:23,0:23:63.22:0,63,2957	0/0:44,0:44:99:0,114,5482	0/0:32,0:32:90.23:0,90,3870	1/1:4,10:14:33.11:921,33,0	1/1:2,8:10:24.08:757,24,0	1/1:1,7:8:12.04:337,12,0	0/0:15,0:15:36.12:0,36,1814	0/0:16,0:16:45.14:0,45,1991	0/0:45,0:45:99:0,117,5046	0/0:30,0:30:84.28:0,84,4101	1/1:2,17:19:39.12:1108,39,0	1/1:3,19:22:48.16:1525,48,0	1/1:1,5:6:15.05:476,15,0
chr10	99757443	.	A	AGAAG	1082.77	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.619;DP=568;FS=4.853;HRun=0;HaplotypeScore=101.4084;InbreedingCoeff=0.9260;MQ=64.23;MQ0=4;MQRankSum=-1.154;QD=25.18;ReadPosRankSum=3.075;VQSLOD=3.4529;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,18:29:36.12:880,36,0	0/0:8,0:8:15.04:0,15,220	0/0:14,0:10:8.77:0,9,110	0/0:23,0:21:29.92:0,30,388	0/0:32,0:32:72.24:0,72,1167	1/1:6,6:12:15.04:321,15,0	0/0:15,0:15:15.03:0,15,216	0/0:29,0:29:44.93:0,45,657	0/0:17,0:17:36.09:0,36,542	0/0:26,0:26:60.13:0,60,954	0/0:19,0:19:42.14:0,42,689	0/0:29,0:29:60.18:0,60,935	0/0:18,0:18:42.14:0,42,689	0/0:13,0:13:30.08:0,30,463	0/0:24,0:24:54.16:0,54,837	0/0:29,0:29:72.21:0,72,1133	0/0:34,0:34:48.96:0,49,993	0/0:25,0:25:60.20:0,60,961	0/0:16,0:16:33.11:0,33,529	0/0:13,0:13:27.04:0,27,402	0/0:8,0:8:12.03:0,12,175	0/0:14,0:14:30.10:0,30,488	0/0:19,0:19:47.37:0,47,742	0/0:29,0:29:54.18:0,54,882	0/0:26,0:26:51.16:0,51,811	0/0:18,0:18:45.15:0,45,718	0/0:20,0:20:39.10:0,39,609	0/0:7,0:7:18.06:0,18,294
chr10	99759048	.	C	CTT	13925.15	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-12.464;DP=718;FS=0.593;HRun=0;HaplotypeScore=87.3885;InbreedingCoeff=1.0000;MQ=89.74;MQ0=0;MQRankSum=-3.882;QD=54.82;ReadPosRankSum=0.831;VQSLOD=5.3096;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,40:43:99:2193,108,0	0/0:21,0:21:63.22:0,63,1028	0/0:33,0:33:89.41:0,89,1433	0/0:22,0:22:60.07:0,60,883	0/0:37,0:37:99:0,108,1688	1/1:0,18:18:51.18:1036,51,0	0/0:19,0:19:54.18:0,54,874	1/1:1,28:32:96.26:1776,96,0	0/0:20,0:20:60.19:0,60,954	0/0:32,0:32:93.30:0,93,1458	0/0:25,0:25:72.23:0,72,1150	0/0:26,0:26:78.27:0,78,1267	0/0:22,0:22:66.23:0,66,1077	0/0:28,0:28:78.25:0,78,1248	0/0:37,0:37:99:0,111,1786	0/0:32,0:31:96.30:0,96,1515	1/1:1,25:26:72.20:1421,72,0	0/0:20,0:20:51.11:0,51,770	1/1:2,20:22:63.21:1267,63,0	1/1:1,27:29:78.21:1543,78,0	1/1:0,15:15:39.13:792,39,0	0/0:23,0:23:69.21:0,69,1077	0/0:28,0:28:84.27:0,84,1342	0/0:12,0:12:36.12:0,36,576	0/0:27,0:27:81.25:0,81,1294	1/1:2,27:29:38.34:1645,38,0	1/1:1,23:25:72.25:1442,72,0	1/1:1,14:15:42.10:812,42,0
chr10	99759110	.	TGG	T	2605.55	PASS	AB=0.982;AC=15;AF=0.268;AN=56;BaseQRankSum=5.217;DP=709;FS=14.330;HRun=5;HaplotypeScore=116.9796;InbreedingCoeff=0.5480;MQ=71.41;MQ0=23;MQRankSum=1.438;QD=10.90;ReadPosRankSum=-0.998;VQSLOD=-0.3251;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,110,1225	0/0:14,0:12:21.36:0,21,316	0/0:61,0:28:68.19:0,68,733	0/0:39,0:22:50.65:0,51,427	0/0:26,0:26:52.35:0,52,650	0/0:15,0:15:28.20:0,28,401	0/0:16,0:15:30.03:0,30,369	1/1:14,29:43:58.49:818,58,0	0/1:19,0:19:9.14:209,0,9	0/0:28,0:28:79.39:0,79,796	0/0:22,0:22:49.85:0,50,652	0/0:24,0:24:60.70:0,61,744	0/0:16,0:16:23.29:0,23,342	0/0:26,0:26:54.68:0,55,676	0/0:31,0:31:81.29:0,81,947	0/0:23,0:22:47.44:0,47,740	1/1:18,0:17:26.64:219,27,0	1/1:15,0:13:16.46:137,16,0	1/1:20,0:17:17.31:310,17,0	0/1:31,1:31:44.71:337,0,45	1/1:28,2:29:19.39:264,19,0	0/0:17,0:17:15.18:0,15,424	0/0:25,0:25:60.30:0,60,751	0/0:27,0:27:44.66:0,45,816	0/0:18,0:18:40.21:0,40,566	0/1:31,0:30:75.69:318,0,76	0/1:15,0:14:23.93:57,0,24	0/1:15,1:16:49.92:124,0,50
chr10	99759154	.	TTAAC	T	341.12	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=3.550;DP=639;FS=10.513;HRun=0;HaplotypeScore=121.1269;InbreedingCoeff=0.4370;MQ=59.91;MQ0=14;MQRankSum=-0.575;QD=5.69;ReadPosRankSum=-3.244;VQSLOD=0.8202;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:99:0,111,3046	0/0:10,0:9:27.09:0,27,748	0/0:42,0:6:9.49:0,9,183	0/0:44,0:12:22.86:0,23,343	0/0:28,0:28:74.84:0,75,1796	0/0:13,0:13:36.12:0,36,888	0/0:18,0:17:47.37:0,47,1229	0/0:21,0:21:58.41:0,58,1532	0/0:18,0:18:46.31:0,46,1163	0/0:16,0:16:45.15:0,45,1148	0/0:18,0:18:51.16:0,51,1343	0/0:19,0:19:56.68:0,57,1366	0/0:15,0:15:42.14:0,42,1119	0/0:26,0:26:61.68:0,62,1815	0/0:24,0:24:72.06:0,72,1875	0/0:31,0:31:93.32:0,93,2598	1/1:10,6:19:27.95:412,28,0	0/0:14,0:13:33.11:0,33,870	0/0:15,0:15:35.95:0,36,928	0/0:29,0:29:10.89:0,11,1776	0/0:32,0:31:69.02:0,69,1855	0/0:20,0:20:57.18:0,57,1595	0/0:25,0:25:60.20:0,60,1623	0/0:23,0:23:63.22:0,63,1656	0/0:24,0:24:66.23:0,66,1811	0/1:23,0:22:22.77:23,0,1441	0/0:14,0:15:40.08:0,40,896	0/1:18,0:18:20.68:21,0,1068
chr10	99760255	.	A	AG	9405.65	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.194;DP=589;FS=4.715;HRun=3;HaplotypeScore=87.7317;InbreedingCoeff=0.9997;MQ=87.83;MQ0=0;MQRankSum=-2.820;QD=37.18;ReadPosRankSum=-0.604;VQSLOD=4.8598;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,41:43:99:1594,114,0	0/0:14,0:14:42.12:0,42,491	0/0:19,0:19:27.02:0,27,430	0/0:26,0:26:40.85:0,41,645	0/0:13,0:13:39.09:0,39,454	1/1:1,14:15:36.12:504,36,0	0/0:12,0:12:33.10:0,33,396	1/1:2,25:27:72.24:1007,72,0	0/0:18,0:18:51.16:0,51,612	0/0:19,0:19:54.16:0,54,648	0/0:19,0:19:51.16:0,51,611	0/0:21,0:21:60.17:0,60,708	0/0:24,0:24:72.22:0,72,864	0/0:12,0:13:39.10:0,39,449	0/0:26,0:26:75.22:0,75,889	0/0:18,0:18:54.15:0,54,637	1/1:2,29:31:75.25:1050,75,0	0/0:24,0:24:69.21:0,69,826	1/1:4,22:26:66.22:923,66,0	1/1:1,26:27:78.22:1069,78,0	1/1:1,15:16:45.15:630,45,0	0/0:13,0:13:39.12:0,39,467	0/0:15,0:15:45.14:0,45,540	0/0:16,0:16:42.13:0,42,504	0/0:26,0:26:75.23:0,75,899	1/1:1,23:24:69.23:966,69,0	1/1:1,19:21:60.20:839,60,0	1/1:3,20:23:60.19:823,60,0
chr10	99760503	.	T	TC	9673.74	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=9.212;DP=700;FS=2.041;HRun=3;HaplotypeScore=93.2183;InbreedingCoeff=0.9994;MQ=76.01;MQ0=0;MQRankSum=-4.103;QD=34.55;ReadPosRankSum=-1.144;VQSLOD=4.6199;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,30:40:99:1284,99,0	0/0:12,0:12:33.10:0,33,396	0/0:21,0:21:57.15:0,57,667	0/0:19,0:18:45.12:0,45,515	0/0:28,0:28:78.24:0,78,935	1/1:6,21:26:75.24:1025,75,0	0/0:25,0:25:66.20:0,66,791	1/1:4,19:23:57.19:791,57,0	0/0:29,0:29:87.25:0,87,1032	0/0:18,0:18:51.16:0,51,612	0/0:17,0:17:51.16:0,51,611	0/0:23,0:23:69.21:0,69,827	0/0:36,0:36:99:0,105,1247	0/0:35,0:35:99:0,102,1224	0/0:24,0:24:69.21:0,69,828	0/0:21,0:21:63.19:0,63,756	1/1:2,26:28:78.23:1064,78,0	0/0:24,0:24:69.21:0,69,828	1/1:5,16:21:51.16:680,51,0	1/1:1,16:17:45.09:591,45,0	1/1:10,52:62:99:1864,141,0	0/0:18,0:18:54.12:0,54,631	0/0:18,0:18:51.13:0,51,589	0/0:30,0:30:90.28:0,90,1079	0/0:22,0:22:66.19:0,66,780	1/1:3,26:29:51.24:1115,51,0	1/1:0,24:24:69.23:965,69,0	1/1:1,8:9:21.07:294,21,0
chr10	99760563	.	A	AG	10186.18	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-7.037;DP=625;FS=25.777;HRun=0;HaplotypeScore=73.0617;InbreedingCoeff=0.9995;MQ=81.76;MQ0=0;MQRankSum=-4.986;QD=40.58;ReadPosRankSum=0.474;VQSLOD=2.8585;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:90.31:1433,90,0	0/0:13,0:13:39.11:0,39,527	0/0:12,0:13:35.58:0,36,434	0/0:22,0:22:53.32:0,53,723	0/0:17,0:17:51.16:0,51,696	1/1:0,22:22:57.19:909,57,0	0/0:28,0:28:84.21:0,84,1088	1/1:0,25:25:75.23:1154,75,0	0/0:24,0:24:72.24:0,72,1006	0/0:17,0:17:42.13:0,42,572	0/0:12,0:12:36.12:0,36,501	0/0:31,0:31:93.31:0,93,1300	0/0:29,0:29:81.24:0,81,1088	0/0:42,0:42:99:0,123,1658	0/0:14,0:14:42.12:0,42,555	0/0:22,0:22:66.22:0,66,923	1/1:2,20:22:60.20:951,60,0	0/0:24,0:24:69.23:0,69,963	1/1:3,13:16:45.14:695,45,0	1/1:2,9:11:27.09:413,27,0	1/1:2,39:41:99:1541,102,0	0/0:11,0:11:30.10:0,30,417	0/0:9,0:9:27.09:0,27,377	0/0:27,0:27:81.27:0,81,1132	0/0:19,0:19:57.19:0,57,796	1/1:1,28:29:39.41:1204,39,0	1/1:2,25:27:72.24:1120,72,0	1/1:0,22:22:48.16:765,48,0
chr10	99761278	.	TG	T	2238.58	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=9.707;DP=257;FS=30.432;HRun=3;HaplotypeScore=32.1119;InbreedingCoeff=0.9094;MQ=97.39;MQ0=0;MQRankSum=-3.229;QD=31.53;ReadPosRankSum=1.576;VQSLOD=1.4275;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:60.19:744,60,0	0/0:4,0:4:12.04:0,12,173	0/0:17,0:17:46.96:0,47,610	0/0:11,0:11:22.51:0,23,396	0/0:15,0:15:45.15:0,45,647	1/1:0,4:4:9.03:112,9,0	0/0:9,0:9:27.09:0,27,389	1/1:0,11:11:33.09:396,33,0	0/0:7,0:7:21.07:0,21,302	0/0:10,0:10:30.10:0,30,431	0/0:11,0:11:33.11:0,33,475	0/0:8,0:8:21.07:0,21,302	0/0:5,0:5:15.05:0,15,215	0/0:10,0:10:30.10:0,30,432	0/0:4,0:4:12.04:0,12,173	0/0:10,0:10:30.10:0,30,432	0/0:20,0:20:60.20:0,60,857	0/0:19,0:19:54.18:0,54,778	1/1:0,2:2:6.02:74,6,0	1/1:0,7:7:21.07:260,21,0	1/1:0,5:5:12.04:149,12,0	0/0:1,0:1:3.01:0,3,43	0/0:7,0:7:21.07:0,21,302	0/0:8,0:8:24.08:0,24,346	0/0:10,0:10:30.10:0,30,431	1/1:0,8:8:24.08:298,24,0	1/1:0,9:9:27.08:335,27,0	1/1:0,3:3:6.02:74,6,0
chr10	99761386	.	GGGGA	G	668.94	PASS	AB=1.000;AC=15;AF=0.288;AN=52;BaseQRankSum=4.746;DP=177;FS=11.464;HRun=0;HaplotypeScore=38.7012;InbreedingCoeff=0.7143;MQ=76.67;MQ0=4;MQRankSum=-6.435;QD=24.78;ReadPosRankSum=-0.216;VQSLOD=1.7127;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,1:2:3.01:48,3,0	./.	0/0:21,0:8:15.01:0,15,219	0/0:38,0:14:20.47:0,20,201	0/0:4,0:4:12.04:0,12,255	1/1:1,1:2:5.98:72,6,0	0/0:10,0:10:27.09:0,27,666	1/1:5,7:12:27.09:436,27,0	0/0:10,0:10:27.09:0,27,550	0/0:5,0:5:9.03:0,9,230	0/0:5,0:5:15.05:0,15,332	0/0:5,0:5:15.05:0,15,331	0/0:5,0:5:12.04:0,12,269	0/0:4,0:4:9.03:0,9,198	0/0:8,0:8:21.07:0,21,436	0/0:4,0:4:9.03:0,9,203	0/0:3,0:3:8.06:0,8,107	0/0:5,0:5:12.04:0,12,270	1/1:2,0:2:3.01:40,3,0	1/1:0,2:2:6.02:86,6,0	0/1:3,0:3:0:0,0,0	0/0:6,0:6:18.06:0,18,420	0/0:2,0:2:6.02:0,6,154	0/0:4,0:4:11.99:0,12,249	0/0:9,0:9:24.08:0,24,563	1/1:1,2:3:6.02:106,6,0	1/1:0,1:1:3.01:37,3,0	./.
chr10	99761449	.	G	GCACTC	9229.67	PASS	AB=0.571;AC=19;AF=0.339;AN=56;BaseQRankSum=0.429;DP=348;FS=34.153;HRun=0;HaplotypeScore=66.6985;InbreedingCoeff=0.8929;MQ=79.67;MQ0=0;MQRankSum=-12.266;QD=82.41;ReadPosRankSum=-1.565;VQSLOD=3.2170;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,5:8:15.05:459,15,0	0/0:2,0:2:6.01:0,6,90	0/0:10,0:10:27.04:0,27,488	0/0:10,0:10:24.07:0,24,483	0/0:26,0:26:78.27:0,78,1692	1/1:2,13:15:42.14:1327,42,0	0/0:11,0:11:33.11:0,33,717	1/1:4,16:20:57.20:1799,57,0	0/0:18,0:18:48.15:0,48,1002	0/0:18,0:18:54.19:0,54,1172	0/0:10,0:10:30.10:0,30,638	0/0:19,0:19:54.19:0,54,1159	0/0:15,0:15:42.14:0,42,912	0/0:13,0:13:39.13:0,39,808	0/0:17,0:17:51.17:0,51,1070	0/0:11,0:11:33.09:0,33,636	1/1:0,9:9:27.09:854,27,0	0/0:9,0:9:27.09:0,27,586	1/1:1,6:8:24.08:692,24,0	1/1:0,10:11:30.10:941,30,0	1/1:0,12:12:30.10:929,30,0	0/0:9,0:9:27.08:0,27,547	0/0:11,0:11:30.09:0,30,611	0/0:12,0:12:36.12:0,36,782	0/0:15,0:15:45.14:0,45,937	0/1:4,11:16:17.05:1185,0,17	1/1:1,8:10:24.08:759,24,0	1/1:0,3:3:9.03:284,9,0
chr10	99763273	.	G	GGT	8282.49	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=18.256;DP=570;FS=0.000;HRun=0;HaplotypeScore=108.8522;InbreedingCoeff=0.9818;MQ=77.66;MQ0=0;MQRankSum=-17.613;QD=49.89;ReadPosRankSum=2.637;VQSLOD=5.6759;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:48.16:833,48,0	0/0:10,0:10:30.10:0,30,490	0/0:24,0:24:69.23:0,69,1085	0/0:25,0:25:69.16:0,69,1084	0/0:28,0:28:81.28:0,81,1321	1/1:1,22:23:66.22:1129,66,0	0/0:16,0:16:48.16:0,48,778	1/1:0,16:16:48.16:853,48,0	0/0:29,0:29:84.29:0,84,1366	0/0:29,0:29:87.30:0,87,1419	0/0:19,0:19:54.18:0,54,874	0/0:17,0:17:51.15:0,51,784	0/0:25,0:25:75.26:0,75,1222	0/0:24,0:24:69.24:0,69,1123	0/0:23,0:23:69.24:0,69,1122	0/0:21,0:21:63.20:0,63,1003	1/1:0,12:12:33.11:552,33,0	0/0:30,0:30:87.30:0,87,1406	1/1:0,10:10:30.10:533,30,0	1/1:0,29:29:87.29:1477,87,0	1/1:0,8:8:15.05:256,15,0	0/0:21,0:21:63.22:0,63,1024	0/0:26,0:26:78.25:0,78,1248	0/0:18,0:18:51.17:0,51,832	0/0:19,0:19:54.18:0,54,875	1/1:0,20:20:60.21:1074,60,0	1/1:0,29:29:87.14:1468,87,0	1/1:0,2:2:6.02:107,6,0
chr10	99763796	.	A	AC	11580.47	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=2.611;DP=708;FS=7.571;HRun=0;HaplotypeScore=74.4084;InbreedingCoeff=1.0000;MQ=82.33;MQ0=0;MQRankSum=-2.505;QD=43.37;ReadPosRankSum=1.011;VQSLOD=5.2323;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:96.33:1501,96,0	0/0:13,0:13:39.13:0,39,543	0/0:20,0:20:54.12:0,54,673	0/0:25,0:25:72.03:0,72,929	0/0:26,0:26:78.25:0,78,1074	1/1:0,29:29:81.28:1266,81,0	0/0:30,0:30:84.27:0,84,1158	1/1:1,33:34:96.29:1431,96,0	0/0:21,0:21:63.21:0,63,879	0/0:44,0:44:99:0,126,1694	0/0:21,0:21:60.18:0,60,809	0/0:26,0:26:78.26:0,78,1087	0/0:34,0:34:99:0,102,1329	0/0:26,0:26:78.24:0,78,1052	0/0:24,0:24:72.24:0,72,1007	0/0:20,0:20:60.20:0,60,839	1/1:0,25:25:72.24:1117,72,0	0/0:22,0:22:60.17:0,60,800	1/1:1,18:19:54.18:838,54,0	1/1:0,17:17:51.17:797,51,0	1/1:0,32:32:81.28:1267,81,0	0/0:19,0:19:57.19:0,57,797	0/0:18,0:18:51.17:0,51,713	0/0:27,0:26:81.26:0,81,1114	0/0:25,0:25:75.25:0,75,1047	1/1:1,31:32:96.29:1440,96,0	1/1:1,28:29:81.27:1266,81,0	1/1:0,15:15:42.14:657,42,0
chr10	99764664	.	AG	A	4759.78	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=17.530;DP=745;FS=1.546;HRun=2;HaplotypeScore=110.3393;InbreedingCoeff=0.9668;MQ=88.20;MQ0=0;MQRankSum=-8.559;QD=24.92;ReadPosRankSum=0.452;VQSLOD=4.6713;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1635	0/0:14,0:14:42.13:0,42,609	0/0:28,0:28:70.45:0,70,1074	0/0:29,0:29:87.22:0,87,1220	0/0:32,0:32:96.32:0,96,1434	0/0:36,0:36:99:0,108,1614	0/0:16,0:16:48.15:0,48,698	1/1:6,37:43:96.29:1152,96,0	0/0:18,0:18:54.17:0,54,789	0/0:29,0:29:81.27:0,81,1205	0/0:30,0:30:87.28:0,87,1284	0/0:44,0:44:99:0,132,1978	0/0:39,0:39:99:0,117,1712	0/0:26,0:26:78.26:0,78,1169	0/0:26,0:26:78.25:0,78,1132	0/0:34,0:33:99:0,102,1494	0/0:11,0:11:33.11:0,33,489	0/0:11,0:11:30.10:0,30,450	1/1:1,13:14:39.12:461,39,0	1/1:2,32:34:93.29:1116,93,0	1/1:3,28:31:69.20:828,69,0	0/0:14,0:14:39.13:0,39,585	0/0:30,0:30:90.29:0,90,1330	0/0:25,0:25:75.24:0,75,1105	0/0:24,0:24:72.24:0,72,1078	1/1:3,21:24:21.22:711,21,0	1/1:31,0:31:3:26,3,0	1/1:1,13:14:39.12:468,39,0
chr10	99764666	.	GA	G	4771.79	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=17.544;DP=737;FS=1.543;HRun=2;HaplotypeScore=107.1053;InbreedingCoeff=0.9669;MQ=87.61;MQ0=0;MQRankSum=-5.014;QD=26.96;ReadPosRankSum=0.535;VQSLOD=4.5430;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,1:38:99:0,111,1634	0/0:14,0:14:39.13:0,39,584	0/0:27,0:27:64.86:0,65,1005	0/0:28,0:28:78.18:0,78,1140	0/0:34,0:34:99:0,102,1489	0/0:36,0:36:99:0,108,1614	0/0:16,0:16:48.16:0,48,718	1/1:39,0:39:96.29:1151,96,0	0/0:18,0:18:54.17:0,54,791	0/0:28,0:28:84.26:0,84,1221	0/0:30,0:30:90.29:0,90,1313	0/0:45,0:45:99:0,135,2005	0/0:39,0:39:99:0,111,1661	0/0:27,0:27:81.27:0,81,1195	0/0:27,0:27:75.23:0,75,1085	0/0:34,0:33:99:0,99,1479	0/0:11,0:11:33.08:0,33,470	0/0:12,0:12:36.03:0,36,490	1/1:13,0:13:39.12:461,39,0	1/1:32,0:32:93.29:1116,93,0	1/1:29,0:29:69.07:827,69,0	0/0:15,0:15:42.13:0,42,610	0/0:31,0:31:90.29:0,90,1329	0/0:25,0:25:75.21:0,75,1099	0/0:25,0:25:75.23:0,75,1102	1/1:23,0:23:21.23:711,21,0	1/1:0,28:28:3.01:38,3,0	1/1:13,0:13:39.12:468,39,0
chr10	99765577	.	AAT	A	2334.52	PASS	AB=0.856;AC=18;AF=0.333;AN=54;BaseQRankSum=9.623;DP=253;FS=20.193;HRun=0;HaplotypeScore=36.7638;InbreedingCoeff=0.5934;MQ=78.96;MQ0=0;MQRankSum=0.515;QD=15.56;ReadPosRankSum=0.050;VQSLOD=1.4691;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:18:34.52:168,35,0	0/0:4,0:4:12.04:0,12,196	0/0:6,0:4:2.90:0,3,16	0/0:14,0:9:5.75:0,6,76	0/0:4,0:4:3.01:0,3,49	1/1:3,0:18:36.93:182,37,0	0/0:4,0:4:6.02:0,6,93	1/1:11,18:31:50.85:646,51,0	0/0:5,0:5:6:0,6,73	0/0:3,0:4:12.03:0,12,173	0/0:5,0:5:6.02:0,6,93	0/0:5,0:5:3.01:0,3,44	0/0:4,0:4:12.04:0,12,196	0/0:3,0:3:6.02:0,6,98	0/0:7,0:7:12.04:0,12,196	0/0:4,0:4:6.02:0,6,98	0/0:23,0:23:57.19:0,57,923	0/1:13,1:14:0.81:1,0,502	1/1:5,15:20:45.14:553,45,0	1/1:2,0:3:5.85:51,6,0	1/1:0,1:1:3.01:37,3,0	./.	0/0:2,0:2:6.02:0,6,98	0/0:3,0:2:3.01:0,3,49	0/0:5,0:5:12.04:0,12,196	0/1:5,2:7:39.93:65,0,40	1/1:2,10:12:27.08:332,27,0	1/1:10,16:26:39.12:480,39,0
chr10	99768924	.	CA	C	574.09	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.887;DP=693;FS=1.949;HRun=2;HaplotypeScore=65.8313;InbreedingCoeff=0.9971;MQ=96.18;MQ0=0;MQRankSum=-5.469;QD=27.34;ReadPosRankSum=0.549;VQSLOD=3.2220;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1616	0/0:9,0:9:24.07:0,24,342	0/0:34,0:34:96.28:0,96,1400	0/0:33,0:33:95.91:0,96,1400	0/0:24,0:24:72.23:0,72,1059	0/0:29,0:29:84.25:0,84,1217	0/0:22,0:22:66.22:0,66,989	0/0:36,0:36:99:0,105,1521	0/0:24,0:24:69.23:0,69,1034	0/0:30,0:30:90.29:0,90,1306	0/0:16,0:16:48.15:0,48,698	0/0:26,0:26:78.26:0,78,1168	0/0:34,0:34:99:0,99,1484	0/0:31,0:31:87.29:0,87,1302	0/0:46,0:45:99:0,138,2069	0/0:28,0:28:84.28:0,84,1257	1/1:0,21:21:54.17:669,54,0	0/0:17,0:17:48.16:0,48,719	0/0:23,0:23:69.22:0,69,1015	0/0:22,0:22:66.21:0,66,968	0/0:30,0:30:87.29:0,87,1304	0/0:13,0:13:36.12:0,36,540	0/0:11,0:11:33.10:0,33,475	0/0:19,0:19:57.19:0,57,853	0/0:17,0:17:51.17:0,51,764	0/0:22,0:22:66.22:0,66,989	0/0:28,0:28:84.28:0,84,1256	0/0:12,0:12:30.10:0,30,450
chr10	99769038	.	T	TGTACA	1121.11	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.432;DP=708;FS=1.022;HRun=0;HaplotypeScore=127.1600;InbreedingCoeff=0.9989;MQ=83.26;MQ0=0;MQRankSum=-4.573;QD=56.06;ReadPosRankSum=-0.951;VQSLOD=3.7129;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,2286	0/0:12,0:12:36.12:0,36,756	0/0:18,0:18:39.13:0,39,784	0/0:24,0:24:40.82:0,41,982	0/0:31,0:31:90.31:0,90,1896	0/0:24,0:24:63.20:0,63,1293	0/0:11,0:11:33.10:0,33,653	0/0:34,0:34:90.28:0,90,1764	0/0:24,0:24:63.22:0,63,1341	0/0:36,0:36:99:0,105,2180	0/0:19,0:19:54.17:0,54,1111	0/0:28,0:28:84.29:0,84,1790	0/0:28,0:28:75.23:0,75,1473	0/0:24,0:24:69.24:0,69,1447	0/0:38,0:38:99:0,111,2249	0/0:20,0:20:57.18:0,57,1140	1/1:9,9:20:39.13:1216,39,0	0/0:19,0:19:57.20:0,57,1152	0/0:22,0:22:66.22:0,66,1370	0/0:41,0:41:99:0,117,2455	0/0:23,0:23:66.16:0,66,1262	0/0:31,0:31:87.30:0,87,1855	0/0:27,0:27:78.27:0,78,1655	0/0:21,0:21:60.21:0,60,1278	0/0:23,0:23:66.22:0,66,1370	0/0:24,0:24:69.23:0,69,1435	0/0:38,0:38:99:0,111,2324	0/0:10,0:10:30.10:0,30,617
chr10	99770703	.	G	GCA	1450.18	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.021;DP=929;FS=4.559;HRun=0;HaplotypeScore=110.3136;InbreedingCoeff=0.9997;MQ=82.17;MQ0=0;MQRankSum=-1.463;QD=36.25;ReadPosRankSum=1.244;VQSLOD=5.8996;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,138,1787	0/0:11,0:11:33.10:0,33,423	0/0:23,0:23:63.19:0,63,801	0/0:32,0:32:81.12:0,81,968	0/0:26,0:26:72.22:0,72,941	0/0:18,0:18:45.15:0,45,599	0/0:38,0:38:99:0,99,1301	0/0:32,0:32:78.25:0,78,1027	0/0:39,0:39:99:0,102,1358	0/0:35,0:35:90.29:0,90,1185	0/0:19,0:19:48.16:0,48,639	0/0:34,0:34:93.31:0,93,1238	0/0:52,0:52:99:0,141,1860	0/0:40,0:40:99:0,114,1518	0/0:41,0:41:99:0,117,1542	0/0:37,0:37:99:0,102,1357	1/1:4,36:40:89.92:1545,90,0	0/0:23,0:23:66.19:0,66,848	0/0:26,0:26:63.19:0,63,813	0/0:31,0:31:75.25:0,75,999	0/0:68,0:68:99:0,187,2424	0/0:21,0:21:54.18:0,54,718	0/0:20,0:20:51.15:0,51,664	0/0:42,0:42:99:0,108,1415	0/0:19,0:19:54.18:0,54,716	0/0:41,0:41:99:0,105,1398	0/0:39,0:39:99:0,105,1365	0/0:28,0:28:72.19:0,72,921
chr10	99771481	.	G	GA	879.53	PASS	AB=0.959;AC=19;AF=0.396;AN=48;BaseQRankSum=-3.417;DP=357;FS=13.245;HRun=11;HaplotypeScore=30.4811;InbreedingCoeff=0.5987;MQ=25.39;MQ0=146;MQRankSum=-2.539;QD=5.57;ReadPosRankSum=-0.813;VQSLOD=-0.0389;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:22,1:21:7.48:7,0,121	./.	./.	./.	0/0:13,0:10:11.95:0,12,93	0/1:10,1:7:21.45:21,0,37	0/0:18,0:7:17.93:0,18,139	1/1:14,8:14:12.90:301,13,0	./.	0/0:10,0:5:11.95:0,12,93	0/1:7,0:6:0:0,0,0	0/0:11,0:8:11.95:0,12,93	0/0:8,0:5:8.96:0,9,70	0/0:14,0:6:11.94:0,12,93	0/0:8,0:7:8.96:0,9,70	0/0:14,0:10:17.81:0,18,137	0/0:15,1:8:5.91:0,6,38	1/1:7,12:13:12.01:113,12,0	1/1:3,9:7:20.88:197,21,0	1/1:3,8:9:11.39:105,11,0	1/1:5,6:4:6.01:61,6,0	0/0:5,0:3:2.99:0,3,23	0/0:3,0:2:2.99:0,3,23	0/0:10,0:9:17.93:0,18,139	0/0:18,0:13:5.97:0,6,46	1/1:4,4:3:9.02:91,9,0	1/1:5,20:16:12.02:122,12,0	1/1:2,3:5:3.01:30,3,0
chr10	99772018	.	CA	C	513.93	PASS	AB=0.885;AC=7;AF=0.130;AN=54;BaseQRankSum=1.156;DP=423;FS=9.482;HRun=14;HaplotypeScore=48.1910;InbreedingCoeff=0.4562;MQ=46.11;MQ0=49;MQRankSum=1.691;QD=6.05;ReadPosRankSum=3.381;VQSLOD=1.3838;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,22:32:38.40:373,38,0	0/0:8,0:8:21.01:0,21,191	0/0:28,0:6:5.64:0,6,28	0/0:24,0:9:6.35:0,6,86	0/0:17,0:17:44.88:0,45,401	1/1:4,9:15:35.86:223,36,0	0/0:16,0:14:38.25:0,38,336	0/0:9,1:26:30.30:0,30,262	0/0:5,0:3:9.01:0,9,84	0/0:20,1:17:25.18:0,25,345	0/1:10,4:11:37.89:38,0,94	0/0:11,0:10:27.03:0,27,250	0/0:10,0:8:17.96:0,18,151	0/0:14,0:13:33.04:0,33,305	0/0:10,0:8:24.03:0,24,222	0/0:9,0:6:14.92:0,15,127	./.	0/0:16,3:18:26.95:0,27,230	0/0:9,0:14:30.79:0,31,156	0/0:4,0:5:8.64:0,9,48	0/0:2,0:2:5.68:0,6,28	0/1:6,0:8:2.67:3,0,108	0/1:10,2:11:11.31:11,0,172	0/0:23,1:20:27.38:0,27,378	0/0:14,0:10:20.98:0,21,183	0/0:9,0:11:26.23:0,26,172	0/0:4,0:13:20.04:0,20,110	0/0:6,0:10:23.05:0,23,142
chr10	99773484	.	CA	C	2196.87	PASS	AB=0.839;AC=22;AF=0.393;AN=56;BaseQRankSum=3.473;DP=497;FS=3.715;HRun=12;HaplotypeScore=61.5185;InbreedingCoeff=0.5203;MQ=57.77;MQ0=11;MQRankSum=0.777;QD=9.31;ReadPosRankSum=2.205;VQSLOD=2.8150;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,27:39:56.74:441,57,0	0/1:4,1:5:8.21:8,0,107	0/1:6,1:7:11.10:11,0,50	0/0:4,0:3:4.72:0,5,17	0/1:13,2:16:4.45:4,0,307	1/1:4,12:15:29.87:232,30,0	0/0:12,0:12:26.98:0,27,252	1/1:15,21:34:20.29:427,20,0	0/1:7,1:8:5.16:5,0,134	0/0:22,0:20:50.92:0,51,489	0/0:25,1:28:39.01:0,39,586	0/0:17,0:17:35.95:0,36,332	0/0:14,0:13:36.03:0,36,354	0/0:7,1:9:0.64:0,1,169	0/0:18,0:19:44.92:0,45,441	0/0:24,1:25:37.32:0,37,537	0/0:12,0:19:38.32:0,38,218	0/0:21,2:23:1.23:0,1,329	1/1:3,10:13:23.79:177,24,0	1/1:4,13:17:29.12:231,29,0	1/1:6,9:14:23.47:176,23,0	0/1:10,2:12:22.47:22,0,139	0/0:25,0:25:50.88:0,51,480	0/0:13,0:13:27.05:0,27,274	0/0:26,2:29:37.42:0,37,520	1/1:5,18:23:22.37:347,22,0	1/1:4,14:17:32.82:254,33,0	0/1:5,4:7:18.51:58,0,19
chr10	99773758	.	A	AT	894.16	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.956;DP=581;FS=0.000;HRun=1;HaplotypeScore=53.8063;InbreedingCoeff=0.9881;MQ=80.22;MQ0=0;MQRankSum=-0.317;QD=33.12;ReadPosRankSum=1.244;VQSLOD=3.2164;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1269	0/0:6,0:6:18.06:0,18,234	0/0:16,0:15:39.10:0,39,457	0/0:18,0:18:51.87:0,52,565	0/0:22,0:22:66.20:0,66,841	0/0:20,0:20:57.19:0,57,740	0/0:13,0:13:39.13:0,39,506	0/0:28,0:28:81.26:0,81,1041	0/0:25,0:25:75.24:0,75,973	0/0:11,0:11:33.09:0,33,414	0/0:13,0:13:39.13:0,39,506	0/0:30,0:30:90.29:0,90,1167	0/0:27,0:27:78.25:0,78,1012	0/0:26,0:26:75.24:0,75,973	0/0:23,0:23:69.20:0,69,869	0/0:18,0:18:54.17:0,54,688	1/1:0,27:27:66.22:989,66,0	0/0:27,0:27:75.23:0,75,960	0/0:11,0:11:30.10:0,30,390	0/0:21,0:21:63.19:0,63,803	0/0:37,0:37:99:0,108,1402	0/0:8,0:8:24.08:0,24,312	0/0:11,0:11:30.10:0,30,389	0/0:14,0:14:42.12:0,42,530	0/0:23,0:23:66.21:0,66,857	0/0:29,0:29:84.26:0,84,1079	0/0:34,0:34:99:0,102,1292	0/0:10,0:10:30.10:0,30,389
chr10	99774366	.	T	TA	5980.58	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-6.595;DP=536;FS=0.357;HRun=4;HaplotypeScore=49.8973;InbreedingCoeff=0.9419;MQ=77.67;MQ0=0;MQRankSum=-0.551;QD=34.37;ReadPosRankSum=-1.058;VQSLOD=4.7312;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.14:0,51,573	0/0:9,0:9:24.07:0,24,272	0/0:14,0:14:33.05:0,33,352	0/1:9,0:8:2.76:3,0,175	0/0:38,0:38:99:0,114,1261	0/0:22,0:22:63.18:0,63,714	0/0:14,0:14:36.09:0,36,398	1/1:3,29:32:84.28:1146,84,0	0/0:16,0:16:48.14:0,48,543	0/0:27,0:27:78.21:0,78,876	0/0:21,0:21:60.16:0,60,671	0/0:24,0:25:69.18:0,69,773	0/0:33,0:33:90.23:0,90,1009	0/0:21,0:21:63.18:0,63,715	0/0:18,0:18:51.14:0,51,579	0/0:17,0:17:45.13:0,45,511	1/1:1,19:20:48.16:657,48,0	0/0:16,0:16:39.11:0,39,442	1/1:0,22:22:66.22:903,66,0	1/1:1,19:20:54.18:738,54,0	1/1:1,10:11:30.10:410,30,0	0/0:10,0:10:30.07:0,30,330	0/0:14,0:14:39.09:0,39,430	0/0:6,0:6:18.05:0,18,204	0/0:22,0:22:63.18:0,63,715	1/1:3,28:31:53.23:1097,53,0	1/1:2,18:19:51.17:698,51,0	1/1:0,9:9:24.08:328,24,0
chr10	99774633	.	AAG	A	744.44	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.399;DP=626;FS=4.341;HRun=0;HaplotypeScore=71.2465;InbreedingCoeff=0.9552;MQ=74.60;MQ0=0;MQRankSum=-1.833;QD=37.22;ReadPosRankSum=-0.953;VQSLOD=5.4140;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.22:0,63,1159	0/0:9,0:9:21.07:0,21,393	0/0:12,0:12:30.10:0,30,545	0/0:9,0:9:14.99:0,15,205	0/0:27,0:27:81.28:0,81,1507	0/0:31,0:31:93.32:0,93,1731	0/0:10,0:10:27.09:0,27,506	0/0:38,0:38:99:0,105,1918	0/0:24,0:24:72.23:0,72,1309	0/0:28,0:28:81.28:0,81,1518	0/0:32,0:32:93.32:0,93,1728	0/0:19,0:19:54.19:0,54,1012	0/0:22,0:22:66.23:0,66,1236	0/0:27,0:27:81.26:0,81,1486	0/0:44,0:44:99:0,126,2305	0/0:23,0:23:60.21:0,60,1111	1/1:0,20:20:57.05:839,57,0	0/0:19,1:20:13.01:0,13,967	0/0:19,0:19:57.20:0,57,1059	0/0:24,0:24:72.25:0,72,1348	0/0:13,0:13:39.13:0,39,731	0/0:17,0:17:51.17:0,51,955	0/0:17,0:17:51.17:0,51,955	0/0:26,0:26:75.26:0,75,1404	0/0:23,0:23:66.18:0,66,1200	0/0:27,0:27:81.27:0,81,1489	0/0:32,0:31:93.32:0,93,1734	0/0:11,0:11:30.10:0,30,562
chr10	99776103	.	C	CCAAG	1751.13	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.822;DP=747;FS=5.021;HRun=0;HaplotypeScore=122.2733;InbreedingCoeff=0.9981;MQ=85.01;MQ0=0;MQRankSum=-1.581;QD=48.64;ReadPosRankSum=1.115;VQSLOD=4.6600;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,154,2703	0/0:10,0:10:26.76:0,27,487	0/0:27,0:27:54.15:0,54,904	0/0:26,0:26:49.06:0,49,964	0/0:20,0:20:51.17:0,51,921	0/0:16,0:16:48.10:0,48,801	0/0:35,0:35:99:0,102,1855	0/0:23,0:23:57.18:0,57,982	0/0:28,0:28:75.26:0,75,1349	0/0:22,0:22:60.20:0,60,1046	0/0:18,0:18:48.15:0,48,843	0/0:43,0:43:99:0,126,2261	0/0:40,0:40:99:0,105,1843	0/0:35,0:35:96.32:0,96,1710	0/0:34,0:34:99:0,99,1679	0/0:21,0:21:60.20:0,60,1074	1/1:9,26:35:75.22:1846,75,0	0/0:19,0:19:51.14:0,51,880	0/0:21,0:21:48.16:0,48,858	0/0:20,0:20:57.18:0,57,1005	0/0:53,0:53:99:0,150,2673	0/0:12,0:12:33.10:0,33,549	0/0:20,0:20:54.19:0,54,982	0/0:34,0:34:90.27:0,90,1595	0/0:18,0:18:54.15:0,54,942	0/0:27,0:27:72.25:0,72,1310	0/0:23,0:23:66.23:0,66,1201	0/0:11,0:11:30.09:0,30,516
chr10	99776343	.	AACACACACACACAC	A	4786.13	PASS	AB=0.688;AC=16;AF=0.286;AN=56;BaseQRankSum=9.021;DP=552;FS=7.803;HRun=0;HaplotypeScore=216.8316;InbreedingCoeff=0.7158;MQ=59.53;MQ0=13;MQRankSum=-6.211;QD=26.74;ReadPosRankSum=-1.322;VQSLOD=2.9785;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:22:99:192,0,107	0/0:5,0:7:14.11:0,14,737	0/0:22,0:14:6.02:0,6,199	0/0:38,0:27:14.54:0,15,242	0/0:21,0:23:33.11:0,33,1677	0/1:7,0:22:28.01:615,0,28	0/0:25,0:26:30.10:0,30,1720	1/1:25,5:28:17.04:172,17,0	0/0:16,0:18:24.08:0,24,1230	0/0:24,0:24:24.08:0,24,1162	0/0:14,0:16:33.11:0,33,1860	0/0:8,0:11:15.52:0,16,701	0/0:12,0:12:24.08:0,24,1368	0/0:23,0:23:42.14:0,42,2387	0/0:12,0:15:42.14:0,42,2018	0/0:16,0:18:15.05:0,15,710	0/0:15,0:23:30.08:0,30,935	0/0:22,0:22:41.17:0,41,1946	1/1:7,1:8:3.01:118,3,0	1/1:13,7:21:21.03:693,21,0	1/1:14,6:19:5.85:234,6,0	0/0:12,0:15:15.05:0,15,865	0/0:18,0:24:20.56:0,21,938	0/0:13,0:25:39.13:0,39,1947	0/0:5,0:7:12.04:0,12,718	1/1:12,9:21:30.05:979,30,0	1/1:10,15:24:42.14:1567,42,0	1/1:6,1:8:6.02:215,6,0
chr10	99777182	.	CGTATGAT	C	410.48	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.052;DP=733;FS=1.629;HRun=0;HaplotypeScore=164.3646;InbreedingCoeff=0.9830;MQ=64.91;MQ0=0;MQRankSum=-4.147;QD=51.31;ReadPosRankSum=0.494;VQSLOD=3.3957;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.30:0,87,3537	0/0:9,0:9:27.09:0,27,1133	0/0:25,0:24:64.46:0,64,2473	0/0:8,0:7:18.06:0,18,594	0/0:44,0:44:99:0,132,5190	0/0:28,0:28:81.24:0,81,3130	0/0:17,0:17:51.18:0,51,2035	0/0:40,0:40:99:0,120,4642	0/0:32,0:32:96.33:0,96,3887	0/0:41,0:41:99:0,123,4985	0/0:22,0:22:66.23:0,66,2659	0/0:26,0:26:78.21:0,78,3007	0/0:41,0:41:99:0,123,4869	0/0:27,0:27:81.23:0,81,3077	0/0:39,0:39:99:0,117,4731	0/0:22,0:22:66.21:0,66,2585	1/1:0,8:8:18.06:501,18,0	0/0:23,0:23:66.23:0,66,2736	0/0:21,0:21:63.22:0,63,2553	0/0:32,0:32:96.32:0,96,3820	0/0:23,0:23:69.24:0,69,2555	0/0:27,0:27:81.28:0,81,3212	0/0:31,0:31:89.48:0,89,3433	0/0:18,0:18:54.19:0,54,2260	0/0:29,0:29:87.30:0,87,3649	0/0:27,0:27:81.28:0,81,3350	0/0:30,0:30:90.30:0,90,3644	0/0:14,0:14:42.14:0,42,1760
chr10	99777327	.	ACACAGAGAG	A	284.52	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.927;DP=732;FS=3.484;HRun=0;HaplotypeScore=195.8813;InbreedingCoeff=0.9837;MQ=80.69;MQ0=0;MQRankSum=-2.807;QD=12.93;ReadPosRankSum=1.312;VQSLOD=2.8851;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,4386	0/0:13,0:13:39.11:0,39,1452	0/0:28,0:26:69.17:0,69,2183	0/0:32,0:31:65:0,65,1949	0/0:29,0:29:71.94:0,72,2613	0/0:23,0:23:60.21:0,60,2742	0/0:22,0:22:49.37:0,49,1804	0/0:31,0:30:78.18:0,78,2436	0/0:22,0:22:54.13:0,54,1966	0/0:26,0:26:71.02:0,71,2721	0/0:17,0:17:48.15:0,48,2017	0/0:26,0:26:75.23:0,75,3042	0/0:29,0:29:81.25:0,81,3403	0/0:28,0:28:78.24:0,78,2960	0/0:36,0:36:99:0,102,4223	0/0:22,0:22:63.19:0,63,2353	1/1:3,19:22:14.98:373,15,0	0/0:20,0:20:57.02:0,57,1709	0/0:31,0:31:75.20:0,75,2398	0/0:28,0:28:78.13:0,78,2408	0/0:33,0:33:81.18:0,81,3155	0/0:24,0:24:69.20:0,69,2496	0/0:18,0:18:45.11:0,45,1641	0/0:29,0:29:75.24:0,75,3144	0/0:22,0:22:66.13:0,66,2389	0/0:29,0:29:84.27:0,84,3517	0/0:33,0:33:93.26:0,93,3709	0/0:16,0:16:42.09:0,42,1373
chr10	99779605	.	GT	G	810.22	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.647;DP=557;FS=4.258;HRun=1;HaplotypeScore=67.8705;InbreedingCoeff=0.9939;MQ=85.62;MQ0=1;MQRankSum=-1.292;QD=22.51;ReadPosRankSum=1.680;VQSLOD=3.8139;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:99:0,111,1524	0/0:12,0:12:33.06:0,33,448	0/0:22,0:22:53.45:0,53,719	0/0:19,0:19:46.95:0,47,534	0/0:23,0:23:69.18:0,69,920	0/0:14,0:14:42.13:0,42,581	0/0:23,0:23:66.19:0,66,912	0/0:19,0:19:57.08:0,57,738	0/0:8,0:8:24.03:0,24,286	0/0:24,0:24:60.17:0,60,793	0/0:13,0:13:32.87:0,33,368	0/0:21,0:21:63.14:0,63,817	0/0:16,0:16:48.12:0,48,625	0/0:15,0:15:44.75:0,45,550	0/0:28,0:28:84.25:0,84,1154	0/0:19,0:19:29.34:0,29,641	1/1:5,31:35:96.07:905,96,0	0/0:22,0:22:66.22:0,66,938	0/0:16,0:16:48.05:0,48,575	0/0:11,0:11:30.07:0,30,392	0/0:34,0:34:99:0,102,1415	0/0:16,0:16:36.09:0,36,471	0/0:8,0:8:24.08:0,24,342	0/0:30,0:30:87.19:0,87,1180	0/0:23,0:23:63.16:0,63,807	0/0:17,0:17:51.11:0,51,686	0/0:18,0:18:54.15:0,54,726	0/0:11,0:11:32.94:0,33,442
chr10	99779607	.	GGA	G	865.61	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.128;DP=559;FS=4.256;HRun=0;HaplotypeScore=76.8105;InbreedingCoeff=0.9958;MQ=86.20;MQ0=1;MQRankSum=-0.946;QD=24.04;ReadPosRankSum=2.038;VQSLOD=4.3675;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:99:0,111,2203	0/0:11,0:11:33.11:0,33,661	0/0:23,0:23:57.33:0,57,1065	0/0:19,0:19:37.37:0,37,858	0/0:23,0:23:69.24:0,69,1371	0/0:15,0:15:45.15:0,45,897	0/0:25,0:25:75.26:0,75,1475	0/0:19,0:19:57.20:0,57,1145	0/0:8,0:8:24.08:0,24,487	0/0:24,0:24:66.23:0,66,1324	0/0:12,0:12:30.10:0,30,591	0/0:21,0:21:63.22:0,63,1261	0/0:17,0:17:51.17:0,51,985	0/0:17,0:17:51.16:0,51,958	0/0:28,0:28:84.29:0,84,1706	0/0:16,0:16:48.16:0,48,958	1/1:5,31:35:95.04:960,95,0	0/0:22,0:22:66.23:0,66,1341	0/0:15,0:15:45.15:0,45,895	0/0:10,0:10:30.10:0,30,609	0/0:35,0:35:99:0,105,2042	0/0:15,0:15:39.13:0,39,778	0/0:11,0:11:30.10:0,30,581	0/0:29,0:29:87.30:0,87,1760	0/0:23,0:23:69.24:0,69,1337	0/0:17,0:17:51.18:0,51,1030	0/0:19,0:19:57.18:0,57,1120	0/0:11,0:11:33.11:0,33,664
chr10	99779910	.	AT	A	2373.75	PASS	AB=0.652;AC=40;AF=0.769;AN=52;BaseQRankSum=2.155;DP=471;FS=0.000;HRun=15;HaplotypeScore=55.6269;InbreedingCoeff=-0.1785;MQ=44.66;MQ0=45;MQRankSum=1.351;QD=5.33;ReadPosRankSum=2.055;VQSLOD=1.8944;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,16:35:23.82:238,0,24	1/1:4,7:11:8.81:58,9,0	0/0:12,1:1:0:0,0,0	./.	0/1:11,13:24:3.65:110,0,4	0/1:9,12:21:62.03:154,0,62	0/1:13,6:17:50.40:92,0,50	1/1:9,0:23:7.36:45,7,0	1/1:7,5:9:2.90:19,3,0	0/1:9,12:20:18.64:144,0,19	0/1:5,4:8:17.78:30,0,18	1/1:8,5:13:1.34:96,1,0	1/1:11,6:15:15.17:112,15,0	0/1:9,10:18:27.72:91,0,28	1/1:10,10:16:6.20:166,6,0	0/1:9,12:20:14:157,0,14	./.	1/1:8,10:19:5.06:150,5,0	1/1:4,0:8:11.99:35,12,0	0/1:3,0:6:0:0,0,0	1/1:6,0:13:14.64:44,15,0	1/1:2,7:10:15.16:113,15,0	1/1:4,8:12:14.70:96,15,0	1/1:11,7:14:1.52:120,2,0	1/1:4,17:21:43.17:275,43,0	1/1:1,0:17:26.25:76,26,0	1/1:2,0:13:22.02:64,22,0	0/1:4,0:12:11.15:20,0,11
chr10	99780357	.	AGCTGG	A	685.59	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.469;DP=622;FS=0.000;HRun=0;HaplotypeScore=117.8114;InbreedingCoeff=0.9690;MQ=69.02;MQ0=2;MQRankSum=-5.549;QD=42.85;ReadPosRankSum=-0.094;VQSLOD=3.4964;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,3419	0/0:6,0:6:15.05:0,15,446	0/0:22,0:20:54.77:0,55,1540	0/0:22,0:20:46.35:0,46,1210	0/0:22,0:22:63.18:0,63,1726	0/0:18,0:18:54.17:0,54,1598	0/0:33,0:33:99:0,99,3010	0/0:22,0:22:63.18:0,63,1756	0/0:26,0:26:78.24:0,78,2305	0/0:22,0:22:66.22:0,66,1998	0/0:14,0:14:39.13:0,39,1227	0/0:37,0:37:99:0,108,3319	0/0:24,0:24:69.21:0,69,2028	0/0:24,0:24:72.23:0,72,2105	0/0:20,0:20:60.21:0,60,1822	0/0:18,0:18:54.19:0,54,1713	1/1:1,15:16:36.59:780,37,0	0/0:31,0:31:84.27:0,84,2580	0/0:18,0:17:51.18:0,51,1533	0/0:14,0:14:42.13:0,42,1243	0/0:46,0:46:99:0,138,4157	0/0:11,0:11:33.06:0,33,901	0/0:18,0:18:54.19:0,54,1697	0/0:30,0:30:87.25:0,87,2615	0/0:15,0:15:45.14:0,45,1322	0/0:28,0:28:75.26:0,75,2271	0/0:22,0:21:63.22:0,63,1993	0/0:5,0:5:15.05:0,15,445
chr10	99783225	.	AAAACCATTACTC	A	763.19	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.630;DP=539;FS=0.000;HRun=0;HaplotypeScore=174.0250;InbreedingCoeff=0.9726;MQ=93.67;MQ0=0;MQRankSum=-4.738;QD=50.88;ReadPosRankSum=0.367;VQSLOD=3.4113;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.23:0,66,3675	0/0:6,0:6:18.06:0,18,1116	0/0:17,0:17:51.14:0,51,2337	0/0:32,0:32:93.27:0,93,4440	0/0:15,0:15:45.15:0,45,2548	0/0:16,0:16:48.16:0,48,2643	0/0:22,0:22:63.21:0,63,3502	0/0:43,0:43:99:0,123,6758	0/0:16,0:16:48.16:0,48,2729	0/0:20,0:20:57.20:0,57,3507	0/0:14,0:14:42.14:0,42,2462	0/0:20,0:20:60.19:0,60,3382	0/0:18,0:18:54.17:0,54,2897	0/0:19,0:19:55.07:0,55,3108	0/0:24,0:24:72.25:0,72,4246	0/0:17,0:17:51.18:0,51,3016	1/1:0,15:15:24.08:857,24,0	0/0:19,0:19:57.18:0,57,3133	0/0:20,0:20:60.21:0,60,3398	0/0:12,0:12:36.12:0,36,1889	0/0:36,0:36:99:0,108,5892	0/0:11,0:11:24.08:0,24,1384	0/0:14,0:14:42.14:0,42,2371	0/0:19,0:18:51.18:0,51,2958	0/0:22,0:22:60.21:0,60,3577	0/0:18,0:18:54.19:0,54,3317	0/0:23,0:23:69.23:0,69,4060	0/0:6,0:6:15.05:0,15,845
chr10	99786056	.	CA	C	3583.96	PASS	AB=0.543;AC=19;AF=0.339;AN=56;BaseQRankSum=13.980;DP=561;FS=14.218;HRun=8;HaplotypeScore=69.6104;InbreedingCoeff=0.8742;MQ=74.73;MQ0=1;MQRankSum=-5.580;QD=15.72;ReadPosRankSum=-2.956;VQSLOD=1.7245;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:46,1:48:8:54,8,0	0/0:11,0:11:30.08:0,30,351	0/0:20,0:19:38.73:0,39,426	0/0:10,0:8:18.05:0,18,210	0/0:22,0:22:60.14:0,60,725	1/1:22,0:22:11.83:83,12,0	0/0:17,0:17:48.15:0,48,580	1/1:4,32:35:64.30:883,64,0	0/0:13,0:13:39.12:0,39,471	0/0:17,0:17:42.13:0,42,507	0/0:20,0:20:57.16:0,57,677	0/0:21,0:21:60.17:0,60,712	0/0:17,0:17:45.13:0,45,531	0/0:18,0:18:39.10:0,39,450	0/0:21,0:21:57.17:0,57,689	0/0:35,0:35:87.23:0,87,1019	1/1:13,0:13:3:29,3,0	0/0:21,1:22:34.23:0,34,696	1/1:2,15:17:45.05:427,45,0	1/1:2,15:17:45.07:433,45,0	1/1:2,16:18:38.18:375,38,0	0/0:15,0:14:36.11:0,36,435	0/0:16,0:16:48.15:0,48,580	0/0:16,0:16:45.10:0,45,527	0/0:22,0:21:60.16:0,60,711	0/1:4,21:25:36.67:510,0,37	1/1:2,22:24:63.04:588,63,0	1/1:0,8:8:21.03:203,21,0
chr10	99786063	.	AAGTAT	A	4598.50	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=14.447;DP=544;FS=12.863;HRun=0;HaplotypeScore=103.1403;InbreedingCoeff=0.8734;MQ=70.12;MQ0=5;MQRankSum=-3.088;QD=20.81;ReadPosRankSum=-1.405;VQSLOD=3.4189;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,44:46:7.55:99,8,0	0/0:11,0:11:33.11:0,33,693	0/0:19,0:15:38.05:0,38,425	0/0:9,0:6:18.05:0,18,209	0/0:23,0:23:66.14:0,66,1382	1/1:0,0:21:12.04:187,12,0	0/0:16,0:16:48.15:0,48,655	1/1:38,0:37:85.18:931,85,0	0/0:13,0:13:39.13:0,39,650	0/0:16,0:16:48.15:0,48,972	0/0:21,0:21:62.94:0,63,1215	0/0:20,0:20:60.18:0,60,920	0/0:15,0:15:45.13:0,45,725	0/0:17,0:17:41.95:0,42,770	0/0:22,0:22:66.22:0,66,1288	0/0:29,0:29:87.27:0,87,1499	1/1:0,0:10:3:29,3,0	0/0:23,0:23:40.26:0,40,1145	1/1:20,0:19:45.06:492,45,0	1/1:15,0:15:45.12:600,45,0	1/1:16,0:16:38.19:394,38,0	0/0:13,0:12:36.12:0,36,555	0/0:17,0:17:51.16:0,51,829	0/0:16,0:16:48.11:0,48,644	0/0:23,0:22:66.22:0,66,1364	0/1:24,0:24:99:783,0,151	1/1:22,0:22:63.16:839,63,0	1/1:8,0:8:21.04:243,21,0
chr10	99786093	.	GTATGTATGTATGTATT	G	5072.64	PASS	AB=0.939;AC=13;AF=0.232;AN=56;BaseQRankSum=11.651;DP=468;FS=0.000;HRun=0;HaplotypeScore=190.4102;InbreedingCoeff=0.6762;MQ=54.82;MQ0=7;MQRankSum=-6.165;QD=35.47;ReadPosRankSum=-2.803;VQSLOD=3.7087;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:30.43:0,30,417	0/0:14,0:14:39.10:0,39,1867	0/0:4,0:3:8.95:0,9,70	0/0:3,0:1:2.94:0,3,18	0/0:28,0:28:81.71:0,82,3223	0/0:21,0:21:27.06:0,27,403	0/0:11,0:11:30.02:0,30,691	0/1:36,0:32:5.37:689,0,5	0/0:12,0:12:33.05:0,33,963	0/0:19,0:19:57.17:0,57,2059	0/0:22,0:22:57.16:0,57,2637	0/0:13,0:13:33.11:0,33,1266	0/0:10,0:10:27.08:0,27,1073	0/0:15,0:15:30.56:0,31,1504	0/0:23,0:23:44.22:0,44,2990	0/0:20,0:20:60.17:0,60,2088	0/1:7,0:7:12.98:34,0,13	0/0:22,0:22:60.15:0,60,2472	1/1:13,0:10:20.91:298,21,0	1/1:11,5:16:33.01:886,33,0	1/1:11,0:11:9.02:164,9,0	0/0:9,0:8:18.53:0,19,513	0/0:12,0:12:30.09:0,30,941	0/0:6,0:6:15.01:0,15,493	0/0:27,0:27:53.25:0,53,3140	0/1:21,6:27:99:1554,0,384	1/1:16,4:20:47.86:1086,48,0	1/1:13,0:12:35.86:362,36,0
chr10	99786183	.	TA	T	415.44	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.367;DP=551;FS=2.159;HRun=5;HaplotypeScore=72.7621;InbreedingCoeff=0.9881;MQ=77.02;MQ0=0;MQRankSum=-1.324;QD=25.97;ReadPosRankSum=1.135;VQSLOD=3.4814;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.26:0,81,1092	0/0:13,0:13:36.12:0,36,493	0/0:14,0:14:33.08:0,33,427	0/0:9,0:9:16.59:0,17,258	0/0:36,0:36:99:0,105,1419	0/0:25,0:25:63.19:0,63,832	0/0:15,0:15:42.14:0,42,574	0/0:23,0:23:63.20:0,63,849	0/0:13,0:13:36.09:0,36,458	0/0:21,0:21:54.17:0,54,710	0/0:15,0:15:42.14:0,42,574	0/0:22,0:22:63.21:0,63,860	0/0:21,0:21:63.21:0,63,855	0/0:15,0:15:45.14:0,45,594	0/0:14,0:14:39.13:0,39,533	0/0:17,0:17:51.16:0,51,681	1/1:0,16:16:45.13:510,45,0	0/0:22,0:22:63.21:0,63,862	0/0:17,0:17:45.09:0,45,576	0/0:34,0:34:99:0,102,1365	0/0:16,0:16:45.15:0,45,616	0/0:16,0:16:48.16:0,48,657	0/0:13,0:13:36.11:0,36,476	0/0:17,0:17:51.17:0,51,698	0/0:21,0:21:63.21:0,63,862	0/0:28,0:28:78.22:0,78,1033	0/0:34,0:34:99:0,102,1370	0/0:14,0:14:42.14:0,42,575
chr10	99786637	.	A	AC	265.09	PASS	AC=16;AF=0.421;AN=38;BaseQRankSum=-3.092;DP=62;FS=1.519;HRun=4;HaplotypeScore=17.3454;InbreedingCoeff=0.4550;MQ=100.98;MQ0=0;MQRankSum=-0.994;QD=12.05;ReadPosRankSum=-0.663;VQSLOD=0.8331;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,3:5:3.01:41,3,0	0/0:2,0:2:3.01:0,3,34	0/0:12,0:7:4.39:0,4,44	0/0:7,0:7:16.12:0,16,149	0/0:2,0:2:3.01:0,3,34	1/1:1,0:1:2.99:24,3,0	0/0:2,0:2:6.02:0,6,68	1/1:3,0:3:3.01:41,3,0	0/0:2,0:2:6.01:0,6,59	0/0:2,0:2:6.02:0,6,68	./.	./.	0/0:1,0:1:3.01:0,3,33	./.	./.	0/0:3,0:3:8.98:0,9,72	1/1:0,2:2:6.02:82,6,0	./.	./.	1/1:0,1:1:3.01:41,3,0	1/1:3,3:6:6.02:82,6,0	0/0:2,0:2:3.01:0,3,34	./.	0/0:1,0:1:3.01:0,3,34	./.	./.	1/1:0,3:3:3.01:41,3,0	1/1:0,1:1:3.01:41,3,0
chr10	99787321	.	CAAGAA	C	1149.98	PASS	AB=0.822;AC=12;AF=0.214;AN=56;BaseQRankSum=8.218;DP=184;FS=12.349;HRun=0;HaplotypeScore=66.9654;InbreedingCoeff=0.0026;MQ=77.02;MQ0=0;MQRankSum=-8.160;QD=11.98;ReadPosRankSum=-2.365;VQSLOD=0.4808;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,6:16:80.09:437,0,80	0/0:1,0:1:3.01:0,3,100	0/0:6,0:6:13.29:0,13,323	0/0:6,0:6:14.94:0,15,340	0/0:4,0:4:12.04:0,12,350	0/1:7,1:8:22.44:22,0,257	0/0:5,0:5:15.05:0,15,475	0/1:18,6:23:99:297,0,678	0/0:4,0:4:12.04:0,12,400	0/0:7,0:7:21.07:0,21,700	0/0:2,0:2:6.02:0,6,180	0/0:8,0:8:24.08:0,24,799	0/0:3,0:3:9.03:0,9,300	0/0:4,0:4:12.04:0,12,400	0/0:4,0:4:12.04:0,12,391	0/0:9,0:9:27.09:0,27,852	0/1:15,2:17:54.87:55,0,433	0/0:16,0:16:45.15:0,45,1499	0/1:7,1:8:36.66:37,0,300	0/1:2,1:3:50.57:51,0,87	1/1:1,1:2:3.01:57,3,0	0/0:1,0:1:3.01:0,3,100	0/0:1,0:1:3.01:0,3,100	0/0:3,0:3:9.03:0,9,300	0/0:4,0:4:12.04:0,12,400	0/1:6,1:7:21.81:110,0,22	0/1:4,2:6:99:131,0,105	1/1:4,1:5:13.62:104,14,0
chr10	99787326	.	A	ATATATATATTC	12585.45	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=6.196;DP=207;FS=6.282;HRun=0;HaplotypeScore=71.0915;InbreedingCoeff=0.8422;MQ=76.45;MQ0=0;MQRankSum=-11.526;QD=117.62;ReadPosRankSum=-0.225;VQSLOD=4.3200;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,9:20:51.15:2077,51,0	0/0:1,0:1:3.01:0,3,109	0/0:9,0:9:15.69:0,16,403	0/0:5,0:5:12.04:0,12,255	0/0:4,0:4:12.04:0,12,336	1/1:3,4:7:21.07:984,21,0	0/0:5,0:5:15.03:0,15,458	1/1:22,4:25:66.21:2584,66,0	0/0:5,0:5:12.04:0,12,435	0/0:7,0:7:21.07:0,21,743	0/0:3,0:3:9:0,9,148	0/0:9,0:9:27.09:0,27,922	0/0:4,0:4:9.03:0,9,317	0/0:4,0:4:12.04:0,12,387	0/0:5,0:5:12.04:0,12,404	0/0:10,0:10:27.09:0,27,924	1/1:12,8:20:54.19:2734,54,0	0/0:18,0:18:54.12:0,54,1729	1/1:5,3:8:21.07:889,21,0	1/1:2,1:3:9.03:324,9,0	1/1:3,0:3:6.02:141,6,0	0/0:1,0:1:3.01:0,3,109	0/0:1,0:1:3.01:0,3,109	0/0:3,0:3:9.03:0,9,327	0/0:6,0:6:18.06:0,18,590	1/1:2,5:7:21.07:1114,21,0	1/1:5,3:8:21.07:932,21,0	1/1:1,4:5:15.05:806,15,0
chr10	99787337	.	TA	T	2684.89	PASS	AB=1.000;AC=21;AF=0.389;AN=54;BaseQRankSum=10.357;DP=215;FS=2.766;HRun=5;HaplotypeScore=60.8937;InbreedingCoeff=0.8187;MQ=77.92;MQ0=0;MQRankSum=-9.880;QD=26.07;ReadPosRankSum=1.201;VQSLOD=3.3844;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:54.15:611,54,0	./.	0/0:11,0:11:32.47:0,32,410	0/1:6,0:6:9.96:10,0,24	0/0:4,0:4:12.03:0,12,148	1/1:1,6:7:15.04:170,15,0	0/0:5,0:5:15.05:0,15,205	1/1:2,19:20:54.14:604,54,0	0/0:7,0:7:21.07:0,21,286	0/0:7,0:7:21.07:0,21,287	0/0:4,0:4:12.04:0,12,164	0/0:12,0:12:33.11:0,33,451	0/0:7,0:7:21.07:0,21,286	0/0:5,0:5:15.05:0,15,204	0/0:5,0:5:12.04:0,12,164	0/0:10,0:10:30.10:0,30,410	1/1:1,13:14:33.09:373,33,0	0/0:24,0:24:55.18:0,55,796	1/1:2,8:10:24.07:272,24,0	1/1:0,2:2:6.02:68,6,0	1/1:0,3:3:9.03:102,9,0	0/0:1,0:1:3.01:0,3,41	0/0:1,0:1:3.01:0,3,41	0/0:3,0:3:9.03:0,9,123	0/0:6,0:6:18.06:0,18,246	1/1:0,7:7:21.06:238,21,0	1/1:0,8:8:24.07:272,24,0	1/1:0,5:5:15.04:170,15,0
chr10	99787911	.	GA	G	5701.22	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.255;DP=539;FS=9.628;HRun=5;HaplotypeScore=73.6054;InbreedingCoeff=0.9910;MQ=79.01;MQ0=0;MQRankSum=-8.437;QD=30.49;ReadPosRankSum=1.480;VQSLOD=5.1983;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,11:13:27.07:306,27,0	0/0:14,0:14:39.13:0,39,533	0/0:15,0:14:36.08:0,36,467	0/0:14,0:14:39.11:0,39,503	0/0:30,0:30:84.28:0,84,1146	1/1:3,21:24:63.12:688,63,0	0/0:18,0:18:54.18:0,54,738	1/1:3,14:17:48.12:536,48,0	0/0:23,0:23:66.21:0,66,885	0/0:27,0:27:75.25:0,75,1023	0/0:21,0:21:57.17:0,57,749	0/0:16,0:16:48.15:0,48,640	0/0:21,0:21:57.19:0,57,776	0/0:19,0:19:57.19:0,57,779	0/0:25,0:25:72.23:0,72,969	0/0:10,0:10:30.10:0,30,410	1/1:2,14:16:39.11:442,39,0	0/0:26,0:26:78.26:0,78,1056	1/1:2,14:16:44.34:483,44,0	1/1:1,28:29:78.22:883,78,0	1/1:0,3:3:9.03:102,9,0	0/0:20,0:20:60.16:0,60,799	0/0:26,0:26:78.23:0,78,1035	0/0:15,0:15:45.14:0,45,600	0/0:12,0:12:36.12:0,36,492	1/1:0,19:19:57.16:645,57,0	1/1:0,31:31:90.20:1004,90,0	1/1:0,18:18:54.15:613,54,0
chr10	99787953	.	AACAGC	A	9671.88	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=16.391;DP=569;FS=1.513;HRun=0;HaplotypeScore=121.7813;InbreedingCoeff=0.9832;MQ=85.18;MQ0=0;MQRankSum=-10.988;QD=49.60;ReadPosRankSum=-1.178;VQSLOD=4.8092;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:33.11:633,33,0	0/0:15,0:15:45.15:0,45,1383	0/0:23,0:22:60.18:0,60,1633	0/0:18,0:18:48.14:0,48,1333	0/0:30,0:30:90.31:0,90,2694	1/1:2,26:28:69.24:1373,69,0	0/0:18,0:18:48.16:0,48,1458	1/1:3,18:21:51.16:1003,51,0	0/0:25,0:25:69.22:0,69,2018	0/0:29,0:29:81.28:0,81,2372	0/0:16,0:16:45.15:0,45,1368	0/0:12,0:12:36.12:0,36,1102	0/0:24,0:24:72.25:0,72,2162	0/0:16,0:16:45.15:0,45,1289	0/0:21,0:21:63.22:0,63,1890	0/0:16,0:16:45.15:0,45,1341	0/0:14,0:14:39.13:0,39,1176	0/0:21,0:21:57.20:0,57,1619	1/1:4,11:15:36.12:712,36,0	1/1:3,29:32:87.30:1735,87,0	1/1:1,4:5:5.98:60,6,0	0/0:20,0:20:54.17:0,54,1589	0/0:30,0:30:87.30:0,87,2673	0/0:13,0:13:39.12:0,39,1131	0/0:13,0:13:36.12:0,36,1106	1/1:3,26:29:78.25:1573,78,0	1/1:4,31:35:93.32:1885,93,0	1/1:1,12:13:36.09:697,36,0
chr10	99788485	.	AGAG	A	6519.69	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=11.452;DP=611;FS=16.217;HRun=0;HaplotypeScore=92.0239;InbreedingCoeff=0.9880;MQ=61.69;MQ0=0;MQRankSum=-2.146;QD=28.85;ReadPosRankSum=0.661;VQSLOD=4.0504;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:22,16:38:68.87:819,69,0	0/0:9,0:9:27.08:0,27,518	0/0:26,0:21:33.01:0,33,487	0/0:15,0:13:22.59:0,23,428	0/0:20,0:20:48.14:0,48,942	1/1:14,14:28:57.12:779,57,0	0/0:29,0:29:60.17:0,60,1120	1/1:19,10:29:57.12:764,57,0	0/0:26,0:26:69.22:0,69,1362	0/0:19,0:19:48.14:0,48,911	0/0:21,0:20:51.17:0,51,1000	0/0:30,0:30:87.28:0,87,1733	0/0:19,0:19:51.17:0,51,1017	0/0:29,0:29:72.25:0,72,1471	0/0:20,0:20:48.16:0,48,982	0/0:21,0:21:48.16:0,48,982	1/1:6,14:20:36.12:520,36,0	0/0:18,0:18:48.16:0,48,948	1/1:9,14:23:54.14:736,54,0	1/1:4,11:15:39.04:513,39,0	1/1:9,11:20:42.07:546,42,0	0/0:11,0:11:24.08:0,24,489	0/0:17,0:17:39.13:0,39,786	0/0:31,0:31:81.22:0,81,1563	0/0:24,0:24:54.18:0,54,1080	1/1:7,11:18:15.14:536,15,0	1/1:8,21:29:84.25:1176,84,0	1/1:3,3:6:9.03:130,9,0
chr10	99788545	.	C	CAA	5533.29	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=14.760;DP=579;FS=14.143;HRun=8;HaplotypeScore=99.1463;InbreedingCoeff=0.9471;MQ=72.79;MQ0=1;MQRankSum=-4.609;QD=22.22;ReadPosRankSum=-2.800;VQSLOD=1.9372;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,1:30:33.06:341,33,0	0/0:9,0:10:20.14:0,20,261	0/1:23,0:23:1.13:1,0,279	0/0:28,0:23:16.67:0,17,302	0/0:17,0:17:48.12:0,48,534	1/1:8,3:22:30.06:342,30,0	0/0:30,0:30:78.09:0,78,825	1/1:11,25:36:78.11:1071,78,0	0/0:16,0:16:39.10:0,39,435	0/0:26,0:26:69.17:0,69,769	0/0:25,0:25:63.15:0,63,700	0/0:18,0:18:48.12:0,48,535	0/0:20,0:20:51.11:0,51,557	0/0:15,0:15:33.05:0,33,355	0/0:19,0:19:48.12:0,48,535	0/0:24,0:24:63.16:0,63,702	1/1:3,0:23:56.46:419,56,0	0/0:14,0:14:36.09:0,36,393	1/1:7,10:19:39.12:591,39,0	1/1:4,14:18:47.95:621,48,0	1/1:5,9:16:16.26:194,16,0	0/0:10,0:10:21.05:0,21,234	0/0:16,0:16:39.05:0,39,420	0/0:17,0:17:45.12:0,45,501	0/0:25,0:25:69.11:0,69,743	1/1:5,20:25:63.07:875,63,0	1/1:11,19:31:60.19:911,60,0	1/1:3,3:6:12.03:167,12,0
chr10	99788836	.	TGG	T	1970.36	PASS	AB=0.740;AC=31;AF=0.554;AN=56;BaseQRankSum=1.319;DP=411;FS=20.061;HRun=12;HaplotypeScore=71.9668;InbreedingCoeff=0.3948;MQ=70.86;MQ0=0;MQRankSum=-1.256;QD=6.57;ReadPosRankSum=2.694;VQSLOD=-0.4067;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:7.98:0,8,41	0/0:6,0:10:9.98:0,10,35	0/1:16,1:15:10.55:11,0,83	0/0:6,0:5:8.64:0,9,47	0/1:15,4:21:42.54:43,0,63	0/1:10,2:16:41.04:41,0,67	0/1:6,1:16:12.56:13,0,35	1/1:12,7:19:15.86:179,16,0	1/1:7,4:11:12.02:122,12,0	0/0:10,0:10:0:0,0,0	0/1:6,1:12:17.91:18,0,22	0/0:10,0:18:15.15:0,15,55	0/1:10,1:14:3.35:25,0,3	1/1:8,7:16:12:122,12,0	0/0:12,1:19:7.99:0,8,43	0/1:9,1:15:17.06:17,0,23	1/1:8,0:24:32.87:142,33,0	1/1:2,12:14:17.99:172,18,0	1/1:7,7:14:14.96:151,15,0	1/1:3,8:12:17.74:164,18,0	1/1:7,4:11:11.98:110,12,0	0/0:4,0:7:4.99:0,5,18	1/1:6,3:9:9.01:84,9,0	0/0:4,0:13:12.93:0,13,80	0/0:15,0:18:5.92:0,6,82	1/1:4,0:24:55.94:249,56,0	1/1:9,13:24:41.54:390,42,0	1/1:1,0:10:24.70:107,25,0
chr10	99789069	.	A	ATT	8144.40	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.990;DP=649;FS=1.032;HRun=8;HaplotypeScore=99.8111;InbreedingCoeff=0.9664;MQ=78.54;MQ0=0;MQRankSum=-4.900;QD=33.65;ReadPosRankSum=-1.627;VQSLOD=4.3704;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,35:40:93.32:1476,93,0	0/0:12,0:12:33.08:0,33,368	0/0:24,0:22:1.51:0,2,263	0/0:16,0:16:32.39:0,32,306	0/0:34,0:34:96.25:0,96,1070	1/1:2,21:23:60.20:952,60,0	0/0:20,0:20:57.14:0,57,635	1/1:7,17:25:50.66:756,51,0	0/0:27,0:28:80.96:0,81,881	0/0:22,0:22:60.15:0,60,669	0/0:19,0:19:54.15:0,54,602	0/0:23,0:23:66.14:0,66,722	0/0:21,0:21:63.17:0,63,701	0/0:23,0:23:66.16:0,66,725	0/0:30,0:30:81.20:0,81,894	0/0:21,0:21:60.16:0,60,667	1/1:7,0:27:19.37:137,19,0	0/0:14,0:14:39.10:0,39,435	1/1:4,12:16:36.12:571,36,0	1/1:6,24:31:83.76:1254,84,0	1/1:4,10:15:30.10:457,30,0	0/0:17,0:16:47.95:0,48,503	0/0:36,0:36:71.79:0,72,1003	0/0:26,0:26:69.17:0,69,769	0/0:21,0:21:60.16:0,60,669	1/1:4,29:33:87.26:1324,87,0	1/1:4,19:23:57.19:903,57,0	1/1:0,8:9:21.07:314,21,0
chr10	99789539	.	A	AATGG	14963.02	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=17.310;DP=665;FS=3.133;HRun=0;HaplotypeScore=117.0113;InbreedingCoeff=0.9833;MQ=79.23;MQ0=0;MQRankSum=-15.855;QD=63.67;ReadPosRankSum=0.403;VQSLOD=6.4618;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:27:57.20:1612,57,0	0/0:7,0:7:21.06:0,21,395	0/0:17,0:17:44.30:0,44,847	0/0:20,0:20:60.12:0,60,1094	0/0:29,0:29:81.26:0,81,1654	1/1:0,27:27:60.21:1711,60,0	0/0:13,0:13:36.12:0,36,752	1/1:1,34:35:99:2417,102,0	0/0:21,0:21:63.17:0,63,1201	0/0:22,0:22:66.21:0,66,1261	0/0:18,0:18:54.17:0,54,1077	0/0:24,0:24:72.22:0,72,1432	0/0:33,0:33:99:0,99,1918	0/0:32,0:32:96.30:0,96,1902	0/0:42,0:42:99:0,120,2195	0/0:34,0:34:99:0,99,1960	1/1:0,16:19:27.04:701,27,0	0/0:18,0:18:54.16:0,54,1089	1/1:0,23:26:78.11:1803,78,0	1/1:0,25:26:71.96:1768,72,0	1/1:3,12:15:21.07:587,21,0	0/0:20,0:20:60.21:0,60,1246	0/0:24,0:24:72.19:0,72,1325	0/0:33,0:33:99:0,99,1994	0/0:23,0:23:69.24:0,69,1443	1/1:1,21:23:6.36:1779,6,0	1/1:2,25:28:69.11:1981,69,0	1/1:0,9:9:21.07:605,21,0
chr10	99790216	.	T	TCAAAA	155.72	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.184;DP=495;FS=1.966;HRun=0;HaplotypeScore=100.9701;InbreedingCoeff=0.7805;MQ=68.81;MQ0=0;MQRankSum=-1.680;QD=15.57;ReadPosRankSum=0.604;VQSLOD=3.3956;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:42.07:0,42,488	0/0:7,0:7:21.06:0,21,442	0/0:5,0:4:3.84:0,4,108	0/0:10,0:10:20.53:0,21,269	0/0:38,0:38:99:0,110,2322	0/0:16,0:16:42.11:0,42,506	0/0:9,0:9:27.08:0,27,553	0/0:35,0:35:99:0,102,2054	0/0:13,0:13:39.13:0,39,844	0/0:27,0:27:81.28:0,81,1790	0/0:25,0:25:69.22:0,69,1499	0/0:15,0:15:45.12:0,45,916	0/0:15,0:15:45.15:0,45,1048	0/0:22,0:22:66.21:0,66,1452	0/0:17,0:17:48.16:0,48,1012	0/0:19,0:19:54.16:0,54,1101	1/1:3,5:10:7.94:238,8,0	0/0:7,0:7:21.07:0,21,426	0/0:15,0:15:42.59:0,43,823	0/0:28,0:28:81.19:0,81,1661	0/0:9,0:9:27.09:0,27,572	0/0:10,0:10:30.09:0,30,615	0/0:23,0:23:63.22:0,63,1424	0/0:11,0:11:33.10:0,33,723	0/0:15,0:14:45.14:0,45,895	0/0:24,0:24:69.23:0,69,1509	0/0:29,0:29:84.29:0,84,1909	0/0:21,0:21:63.20:0,63,1422
chr10	99790217	.	T	TAA	1052.44	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-1.101;DP=503;FS=13.053;HRun=11;HaplotypeScore=69.9882;InbreedingCoeff=0.9329;MQ=69.44;MQ0=0;MQRankSum=0.604;QD=21.05;ReadPosRankSum=0.664;VQSLOD=1.3492;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:21:36.12:519,36,0	0/0:7,0:7:18.03:0,18,175	0/0:6,0:5:4.99:0,5,36	0/0:10,0:10:11.77:0,12,109	0/0:37,0:37:87.85:0,88,863	1/1:1,12:17:38.10:495,38,0	0/0:10,0:10:20.97:0,21,203	0/0:36,0:36:65.70:0,66,618	0/0:13,0:13:27:0,27,262	0/0:26,0:27:65.79:0,66,623	0/0:24,0:25:47.83:0,48,515	0/0:15,0:15:42.06:0,42,407	0/0:15,0:15:45.07:0,45,436	0/0:20,0:21:59.75:0,60,547	0/0:17,0:17:35.88:0,36,349	0/0:19,0:19:42.02:0,42,402	1/1:12,0:12:20.51:180,21,0	0/0:8,0:8:15.87:0,16,147	0/0:12,0:13:26.94:0,27,311	0/0:28,0:29:68.80:0,69,652	0/0:9,0:9:23.69:0,24,202	0/0:11,0:11:21.01:0,21,204	0/0:20,0:23:50.39:0,50,510	0/0:11,0:11:33.05:0,33,320	0/0:16,0:15:32.99:0,33,320	0/0:23,0:25:59.48:0,59,547	0/0:29,0:29:78.02:0,78,741	0/0:21,0:21:60.09:0,60,582
chr10	99791172	.	T	TTGAC	1292.74	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.724;DP=657;FS=0.000;HRun=0;HaplotypeScore=119.6517;InbreedingCoeff=0.9818;MQ=91.71;MQ0=0;MQRankSum=-4.555;QD=64.64;ReadPosRankSum=0.567;VQSLOD=5.2310;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.26:0,81,1444	0/0:13,0:13:39.13:0,39,705	0/0:30,0:30:75.10:0,75,1137	0/0:26,0:26:59.37:0,59,1020	0/0:35,0:35:93.30:0,93,1641	0/0:26,0:26:75.24:0,75,1332	0/0:18,0:18:48.16:0,48,877	0/0:37,0:37:93.30:0,93,1617	0/0:28,0:28:84.28:0,84,1505	0/0:22,0:22:54.17:0,54,927	0/0:19,0:19:51.17:0,51,927	0/0:27,0:27:72.25:0,72,1318	0/0:26,0:26:75.26:0,75,1371	0/0:25,0:25:75.23:0,75,1309	0/0:27,0:27:81.28:0,81,1461	0/0:21,0:21:54.16:0,54,903	1/1:3,17:20:54.19:1388,54,0	0/0:10,0:10:30.10:0,30,550	0/0:17,0:17:45.15:0,45,822	0/0:30,0:30:78.21:0,78,1368	0/0:10,0:10:24.08:0,24,434	0/0:34,0:34:99:0,99,1747	0/0:22,0:22:63.17:0,63,1111	0/0:17,0:17:51.17:0,51,938	0/0:23,0:23:69.19:0,69,1169	0/0:29,0:29:84.29:0,84,1542	0/0:29,0:29:75.26:0,75,1373	0/0:6,0:6:15.01:0,15,212
chr10	99791232	.	GT	G	7901.51	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.308;DP=623;FS=0.309;HRun=2;HaplotypeScore=59.3274;InbreedingCoeff=0.9989;MQ=73.86;MQ0=0;MQRankSum=-2.375;QD=34.81;ReadPosRankSum=-0.959;VQSLOD=4.5610;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:54.16:686,54,0	0/0:9,0:9:27.08:0,27,382	0/0:11,0:11:27.09:0,27,393	0/0:9,0:9:27.09:0,27,387	0/0:39,0:39:99:0,117,1695	1/1:0,28:28:84.27:1090,84,0	0/0:23,0:23:63.20:0,63,924	1/1:0,30:30:90.25:1123,90,0	0/0:28,0:28:84.27:0,84,1237	0/0:14,0:14:35.95:0,36,493	0/0:20,0:20:57.19:0,57,853	0/0:24,0:24:72.23:0,72,1057	0/0:30,0:30:87.26:0,87,1262	0/0:25,0:25:75.25:0,75,1118	0/0:24,0:24:69.23:0,69,1034	0/0:31,0:31:90.30:0,90,1348	1/1:1,25:26:72.14:880,72,0	0/0:18,0:18:54.14:0,54,779	1/1:0,15:15:45.14:570,45,0	1/1:1,24:25:69.18:876,69,0	1/1:1,9:10:24.08:311,24,0	0/0:30,0:30:87.29:0,87,1282	0/0:19,0:19:54.17:0,54,773	0/0:18,0:18:53.99:0,54,754	0/0:24,0:24:72.20:0,72,1016	1/1:3,22:25:24.26:812,24,0	1/1:0,31:31:81.26:1048,81,0	1/1:0,16:16:39.13:505,39,0
chr10	99791298	.	G	GA	969.48	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.941;DP=645;FS=2.467;HRun=6;HaplotypeScore=69.9299;InbreedingCoeff=0.9971;MQ=76.68;MQ0=0;MQRankSum=-1.272;QD=29.38;ReadPosRankSum=1.961;VQSLOD=4.4998;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:57.13:0,57,581	0/0:8,0:8:24.05:0,24,244	0/0:17,0:17:39.07:0,39,391	0/0:13,0:13:31.54:0,32,283	0/0:40,0:40:99:0,105,1071	0/0:31,0:31:78.17:0,78,796	0/0:18,0:18:45.08:0,45,451	0/0:29,0:29:78.16:0,78,789	0/0:19,0:19:47.78:0,48,470	0/0:25,0:25:69.15:0,69,704	0/0:19,0:19:54.09:0,54,536	0/0:29,0:29:75.15:0,75,758	0/0:27,0:27:66.14:0,66,673	0/0:23,0:23:57.10:0,57,567	0/0:26,0:26:75.17:0,75,764	0/0:29,0:29:84.16:0,84,844	1/1:4,29:33:87.23:1064,87,0	0/0:19,0:19:51.07:0,51,505	0/0:14,0:14:36.08:0,36,367	0/0:28,0:28:78.18:0,78,796	0/0:17,0:17:45.06:0,45,449	0/0:25,0:25:72.14:0,72,726	0/0:23,0:23:63.13:0,63,635	0/0:13,0:13:39.09:0,39,397	0/0:26,0:26:69.12:0,69,690	0/0:26,0:26:69.09:0,69,684	0/0:30,0:30:66.14:0,66,672	0/0:18,0:18:33.06:0,33,337
chr10	99792630	.	G	GAAA	4081.11	PASS	AB=0.816;AC=20;AF=0.357;AN=56;BaseQRankSum=5.568;DP=583;FS=15.441;HRun=13;HaplotypeScore=108.7816;InbreedingCoeff=0.7201;MQ=63.80;MQ0=2;MQRankSum=-3.202;QD=15.82;ReadPosRankSum=-5.077;VQSLOD=-0.5656;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:9,3:31:18.06:289,18,0	0/0:7,0:7:1.91:0,2,87	0/0:19,0:13:6.15:0,6,61	0/0:12,0:9:7.02:0,7,64	0/0:28,0:29:13.75:0,14,437	1/1:4,2:17:11.97:168,12,0	0/0:18,0:20:50.89:0,51,500	1/1:24,4:30:52.85:662,53,0	0/0:20,0:20:25.95:0,26,382	0/1:17,0:19:18.99:19,0,249	0/0:15,0:18:14.69:0,15,252	0/0:20,0:21:29.91:0,30,418	0/0:18,0:20:17.35:0,17,339	0/0:18,0:20:18.52:0,19,359	0/0:21,0:23:19.38:0,19,486	0/0:13,0:18:25.11:0,25,251	0/0:22,0:23:55.39:0,55,558	1/1:4,0:23:3.33:42,3,0	1/1:7,10:20:16.51:422,17,0	1/1:6,14:23:45.50:628,45,0	1/1:1,11:12:2.94:18,3,0	0/0:11,0:12:20.84:0,21,211	0/0:21,0:26:33.44:0,33,367	0/0:17,0:17:35.86:0,36,375	0/0:17,0:19:13.24:0,13,274	0/1:15,16:36:11.36:555,0,11	1/1:27,3:30:17.76:589,18,0	1/1:8,8:17:42.12:689,42,0
chr10	99794459	.	GCA	G	2125.98	PASS	AB=0.875;AC=19;AF=0.339;AN=56;BaseQRankSum=4.120;DP=528;FS=3.434;HRun=0;HaplotypeScore=78.7817;InbreedingCoeff=0.8679;MQ=67.42;MQ0=5;MQRankSum=-0.092;QD=10.22;ReadPosRankSum=-1.837;VQSLOD=2.9277;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:37,3:40:85.75:1047,86,0	0/0:5,0:5:15.05:0,15,227	0/0:13,0:9:4.72:0,5,147	0/0:11,0:8:18.10:0,18,95	0/0:17,0:17:45.12:0,45,675	1/1:12,2:14:29.89:369,30,0	0/0:33,0:33:92.96:0,93,1348	1/1:26,0:26:18.44:144,18,0	0/0:23,0:23:56.46:0,56,765	0/0:21,0:21:63.09:0,63,862	0/0:24,0:24:56.97:0,57,869	0/0:20,0:20:44.20:0,44,598	0/0:8,0:8:24.05:0,24,333	0/0:17,0:17:45.04:0,45,509	0/0:11,0:11:32.63:0,33,380	0/0:19,0:19:54.02:0,54,745	1/1:26,0:26:16.46:111,16,0	0/0:29,0:29:81.10:0,81,1212	1/1:12,2:14:17.96:143,18,0	1/1:15,0:15:11.39:93,11,0	1/1:32,1:33:16.78:123,17,0	0/0:16,0:16:42.10:0,42,576	0/0:9,0:9:24:0,24,288	0/0:32,0:32:66.16:0,66,874	0/0:12,0:11:24.08:0,24,388	0/1:18,3:21:27.43:168,0,27	1/1:9,1:10:12.27:104,12,0	1/1:9,0:8:7.51:32,8,0
chr10	99794467	.	GCACA	G	798.13	PASS	AB=0.976;AC=20;AF=0.370;AN=54;BaseQRankSum=2.818;DP=528;FS=13.308;HRun=0;HaplotypeScore=95.4514;InbreedingCoeff=0.1600;MQ=62.35;MQ0=11;MQRankSum=0.303;QD=2.93;ReadPosRankSum=0.576;VQSLOD=1.1215;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:48.15:0,48,906	0/0:6,0:5:3.01:0,3,42	./.	0/0:12,0:9:3.01:0,3,43	0/0:16,0:16:21.06:0,21,368	0/1:14,0:15:19.36:19,0,137	0/1:30,0:30:14.91:15,0,598	0/1:25,0:25:15.88:38,0,16	0/0:18,0:25:13.88:0,14,596	0/0:21,0:21:40.60:0,41,594	0/0:26,0:26:20.82:0,21,329	0/0:17,0:17:23.75:0,24,438	0/0:10,0:10:5.92:0,6,273	1/1:7,13:20:13.91:193,14,0	0/1:10,0:10:29.47:29,0,123	0/1:16,2:18:19.68:20,0,500	1/1:16,0:25:2.94:18,3,0	0/0:30,1:34:1.74:0,2,791	0/0:10,0:10:5.49:0,5,25	0/0:17,0:16:11.79:0,12,80	0/1:32,1:33:56.59:57,0,77	1/1:12,4:16:6.02:94,6,0	1/1:4,3:7:3.01:47,3,0	1/1:18,17:35:18.95:284,19,0	0/0:14,0:13:15.04:0,15,251	0/1:17,0:17:32.60:33,0,33	0/1:11,0:11:25.23:25,0,54	1/1:8,2:8:6.02:94,6,0
chr10	99796563	.	GTTTTTTT	G	6536.41	PASS	AB=0.552;AC=12;AF=0.214;AN=56;BaseQRankSum=10.990;DP=549;FS=0.000;HRun=14;HaplotypeScore=130.0304;InbreedingCoeff=0.7923;MQ=67.78;MQ0=2;MQRankSum=-8.914;QD=39.14;ReadPosRankSum=3.571;VQSLOD=3.4074;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:19:47.19:0,47,1481	0/0:10,0:11:30.06:0,30,861	0/0:28,0:17:32.71:0,33,477	0/0:15,0:8:15.43:0,15,276	0/0:19,0:20:54.17:0,54,1639	0/0:7,0:27:51.15:0,51,1267	0/0:23,0:26:69.20:0,69,2056	1/1:10,22:32:55.85:1172,56,0	0/0:18,0:19:57.20:0,57,1969	0/0:20,0:20:51.12:0,51,1265	0/0:17,0:18:48.16:0,48,1426	0/0:10,0:12:36.12:0,36,1302	0/0:9,0:13:33.11:0,33,1194	0/0:11,0:13:33.11:0,33,1066	0/0:19,0:19:57.19:0,57,1827	0/0:24,0:24:60.21:0,60,2065	0/0:14,0:17:45.15:0,45,1472	0/0:15,0:16:42.06:0,42,1135	1/1:2,15:17:42.11:830,42,0	1/1:3,22:25:59.75:1109,60,0	0/1:2,7:9:11.78:120,0,12	0/0:8,0:10:30.10:0,30,938	0/0:19,0:19:54.17:0,54,1525	0/0:15,0:17:45.15:0,45,1546	0/0:17,0:17:48.13:0,48,1366	1/1:4,16:20:45.08:910,45,0	1/1:4,40:44:87.28:1815,87,0	0/1:3,17:20:61.26:581,0,61
chr10	99796682	.	TAAA	T	3611.29	PASS	AB=0.568;AC=13;AF=0.232;AN=56;BaseQRankSum=5.890;DP=418;FS=23.792;HRun=12;HaplotypeScore=67.3438;InbreedingCoeff=0.8515;MQ=69.93;MQ0=1;MQRankSum=-2.837;QD=27.15;ReadPosRankSum=0.446;VQSLOD=0.7005;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:15:29.91:0,30,251	0/0:3,0:3:6.02:0,6,118	0/0:14,0:10:18.06:0,18,266	0/0:13,0:10:6.40:0,6,97	0/0:27,0:31:75.60:0,76,1222	0/0:16,0:17:45.13:0,45,844	0/0:11,0:14:42.10:0,42,720	1/1:5,20:25:60.16:757,60,0	0/0:15,0:15:24.07:0,24,419	0/0:15,0:17:42.10:0,42,716	0/0:15,0:17:48.13:0,48,859	0/0:7,0:7:15.05:0,15,296	0/0:8,0:8:18.06:0,18,317	0/0:12,0:12:24.08:0,24,460	0/0:14,0:15:33.11:0,33,635	0/0:17,0:16:36.12:0,36,696	0/0:1,0:20:22.95:0,23,102	0/0:11,0:11:24.06:0,24,437	1/1:7,16:23:45.09:568,45,0	1/1:6,13:19:39.08:493,39,0	1/1:1,9:10:24.06:303,24,0	0/0:10,0:11:30.09:0,30,535	0/0:11,0:11:24.08:0,24,473	0/0:11,0:11:27.09:0,27,491	0/0:6,0:6:18.06:0,18,341	0/1:6,19:25:22.96:581,0,23	1/1:3,21:24:57.16:720,57,0	1/1:2,5:7:15.01:190,15,0
chr10	99797967	.	GTTT	G	4969.28	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.364;DP=493;FS=1.701;HRun=15;HaplotypeScore=92.6788;InbreedingCoeff=0.9592;MQ=72.67;MQ0=1;MQRankSum=-2.348;QD=23.55;ReadPosRankSum=5.195;VQSLOD=4.3053;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:18:33.02:367,33,0	0/0:10,0:13:33.09:0,33,532	0/0:23,0:15:12.91:0,13,281	0/0:9,0:10:1.84:0,2,207	0/0:19,0:26:66.18:0,66,1015	1/1:4,22:28:64.47:704,64,0	0/0:14,0:14:27.07:0,27,438	1/1:3,14:17:43.88:465,44,0	0/0:10,0:12:33.07:0,33,517	0/0:20,0:21:48.10:0,48,752	0/0:16,0:20:38.16:0,38,566	0/0:11,0:13:33.11:0,33,548	0/0:8,0:10:29.93:0,30,481	0/0:10,0:11:27.96:0,28,417	0/0:10,0:13:36.05:0,36,515	0/0:21,0:22:62.23:0,62,1027	1/1:3,16:21:41.40:408,41,0	0/0:21,0:21:51.15:0,51,839	1/1:4,6:10:17.98:202,18,0	1/1:13,21:36:71.58:751,72,0	1/1:3,11:15:32.72:343,33,0	0/0:12,0:12:36.12:0,36,630	0/0:15,0:18:45.10:0,45,668	0/0:5,0:5:15.05:0,15,249	0/0:15,0:17:45.13:0,45,751	1/1:5,24:31:38.95:798,39,0	1/1:4,25:29:71.96:780,72,0	1/1:0,4:5:14.98:152,15,0
chr10	99799220	.	T	TA	2908.59	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-3.102;DP=495;FS=2.991;HRun=11;HaplotypeScore=53.9380;InbreedingCoeff=0.9278;MQ=73.88;MQ0=2;MQRankSum=-2.670;QD=15.81;ReadPosRankSum=-0.087;VQSLOD=4.1861;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,3:37:65.51:357,66,0	0/0:10,0:10:18.81:0,19,141	0/0:25,0:13:11.21:0,11,116	0/0:36,1:21:13.11:0,13,145	0/0:14,0:14:35.63:0,36,269	1/1:1,1:18:28.41:143,28,0	0/0:15,0:16:34.89:0,35,261	1/1:6,19:26:57.10:571,57,0	0/0:15,0:15:38.81:0,39,299	0/0:18,0:18:32.83:0,33,254	0/0:5,0:5:14.94:0,15,116	0/0:16,0:17:37.86:0,38,283	0/0:20,0:20:47.79:0,48,371	0/0:14,0:15:37.89:0,38,284	0/0:22,0:22:50.74:0,51,392	0/0:10,0:10:23.89:0,24,186	0/0:17,0:17:43.65:0,44,330	0/0:15,0:15:32.85:0,33,255	1/1:7,13:18:36.04:348,36,0	1/1:5,11:19:1.57:337,2,0	1/1:0,8:8:15.03:152,15,0	0/0:3,0:3:5.97:0,6,46	0/0:21,0:21:50.77:0,51,390	0/0:7,0:7:20.89:0,21,158	0/0:23,0:23:50.79:0,51,395	1/1:4,23:27:45.86:635,46,0	1/1:4,18:22:45.07:449,45,0	1/1:0,7:7:12.02:122,12,0
chr10	99799490	.	TACACACACAC	T	584.60	PASS	AB=0.938;AC=12;AF=0.240;AN=50;BaseQRankSum=3.904;DP=324;FS=2.813;HRun=0;HaplotypeScore=96.7134;InbreedingCoeff=0.4635;MQ=59.76;MQ0=6;MQRankSum=-2.904;QD=7.49;ReadPosRankSum=1.495;VQSLOD=1.8079;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:11.33:11,0,120	0/0:3,0:3:6.02:0,6,240	./.	./.	0/0:8,0:8:15.05:0,15,622	0/0:12,0:12:6.02:0,6,264	0/0:16,0:16:12.04:0,12,466	0/0:32,0:31:14.38:0,14,199	0/0:7,0:8:15.05:0,15,636	0/0:5,0:4:9.03:0,9,443	./.	0/0:16,0:16:24.08:0,24,1128	0/0:9,0:9:12.04:0,12,573	0/0:8,0:8:6.02:0,6,285	0/0:7,0:6:6.02:0,6,291	0/0:7,0:7:12.04:0,12,597	0/0:14,0:14:8.99:0,9,281	0/0:23,0:24:21.01:0,21,683	1/1:11,2:13:3:89,3,0	1/1:2,6:8:8.98:140,9,0	0/0:11,1:11:2.82:0,3,28	0/0:2,0:2:3.01:0,3,128	0/1:6,0:7:10.96:11,0,273	0/0:20,0:20:39.13:0,39,1693	0/0:7,0:7:3.01:0,3,149	1/1:11,4:15:5.74:138,6,0	1/1:2,4:6:6.02:178,6,0	1/1:3,1:5:6.91:161,7,0
chr10	99799533	.	A	ACACC	602.43	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.689;DP=385;FS=0.000;HRun=0;HaplotypeScore=75.1976;InbreedingCoeff=0.7302;MQ=70.14;MQ0=18;MQRankSum=-0.204;QD=8.73;ReadPosRankSum=0.234;VQSLOD=2.0889;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:19:19.82:301,20,0	0/0:5,0:4:9:0,9,86	0/0:35,0:19:56.88:0,57,512	0/0:24,0:12:20.92:0,21,199	0/0:13,0:13:29.87:0,30,262	0/1:10,0:9:22.27:22,0,88	0/0:17,0:17:44.93:0,45,441	0/0:23,0:22:53.77:0,54,476	1/1:4,7:13:12:236,12,0	0/0:16,0:15:38.97:0,39,379	0/0:7,0:7:17.98:0,18,150	0/0:17,0:17:44.85:0,45,467	0/0:7,0:7:20.99:0,21,233	0/0:9,0:9:20.83:0,21,186	0/0:10,0:9:23.95:0,24,225	0/0:10,0:10:30.01:0,30,342	0/0:16,0:15:41.65:0,42,302	1/1:7,17:25:7.89:181,8,0	0/0:13,0:12:26.29:0,26,250	0/0:12,0:12:20.74:0,21,157	0/0:19,0:19:33.38:0,33,264	0/0:5,0:5:11.95:0,12,94	0/0:10,0:10:17.89:0,18,137	0/0:19,0:19:39.51:0,40,536	0/0:2,0:2:6.01:0,6,80	0/0:14,0:14:38.99:0,39,349	0/0:7,0:7:14.96:0,15,142	0/0:6,0:6:14.94:0,15,145
chr10	99799629	.	T	TC	636.82	PASS	AC=18;AF=0.333;AN=54;BaseQRankSum=2.647;DP=181;FS=6.124;HRun=7;HaplotypeScore=27.5707;InbreedingCoeff=0.6915;MQ=84.44;MQ0=3;MQRankSum=-0.532;QD=11.58;ReadPosRankSum=0.532;VQSLOD=0.6677;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:18.02:0,18,172	0/0:1,0:1:3:0,3,29	0/0:19,0:11:11.47:0,11,113	0/0:30,0:18:10.58:0,11,132	0/0:6,0:6:9.01:0,9,87	1/1:0,4:4:9.03:109,9,0	0/0:8,0:8:17.87:0,18,174	1/1:15,0:15:28.91:211,29,0	0/0:4,0:4:6.01:0,6,58	0/0:6,0:6:12.02:0,12,116	0/0:2,0:2:6:0,6,52	0/0:3,0:3:9.01:0,9,87	0/0:2,0:2:6.01:0,6,58	0/0:6,0:6:15.01:0,15,139	0/0:3,0:3:6.01:0,6,58	0/0:2,0:2:6.01:0,6,57	1/1:1,0:1:3.01:32,3,0	0/0:7,0:7:18.03:0,18,173	1/1:7,0:7:11.82:78,12,0	1/1:5,0:5:2.96:19,3,0	1/1:12,0:12:23.87:181,24,0	0/0:3,0:3:3:0,3,29	0/0:5,0:5:12:0,12,110	0/0:3,0:3:9.01:0,9,87	./.	1/1:5,0:4:5.95:52,6,0	1/1:4,0:4:11.98:114,12,0	1/1:2,0:2:2.97:20,3,0
chr10	99799631	.	C	CT	1390.91	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-2.681;DP=185;FS=13.519;HRun=0;HaplotypeScore=27.0634;InbreedingCoeff=0.7231;MQ=80.99;MQ0=3;MQRankSum=-0.559;QD=26.24;ReadPosRankSum=0.454;VQSLOD=2.9958;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:24.02:0,24,295	0/0:2,0:2:3.01:0,3,42	0/0:23,0:9:0.54:0,1,194	0/0:32,0:18:30.45:0,30,283	0/0:6,0:6:15.03:0,15,177	1/1:4,0:4:8.10:37,8,0	0/0:8,0:8:20.90:0,21,278	1/1:0,14:14:35.53:539,36,0	0/0:4,0:4:11.99:0,12,130	0/0:6,0:6:15.04:0,15,189	0/0:2,0:2:6.02:0,6,83	0/0:4,0:4:9.03:0,9,126	0/0:2,0:2:6.02:0,6,84	0/0:6,0:6:18.05:0,18,234	0/0:3,0:3:9.02:0,9,110	0/0:2,0:2:6.02:0,6,81	1/1:1,0:1:2.74:12,3,0	0/0:7,0:7:21.06:0,21,276	1/1:0,6:6:18.04:233,18,0	1/1:1,4:5:5.97:57,6,0	1/1:1,12:13:24.08:357,24,0	0/0:3,0:3:5.97:0,6,61	0/0:6,0:6:17.98:0,18,212	0/0:3,0:3:9.03:0,9,126	0/0:2,0:2:3:0,3,27	1/1:1,3:3:9:107,9,0	1/1:0,3:4:12.04:165,12,0	1/1:1,1:2:6:69,6,0
chr10	99801765	.	GTATATATATATATATATATATATATATATATATATATATA	G	2399.35	PASS	AB=0.759;AC=5;AF=0.208;AN=24;BaseQRankSum=3.911;DP=151;FS=6.186;HRun=0;HaplotypeScore=144.9194;InbreedingCoeff=0.3364;MQ=63.54;MQ0=1;MQRankSum=-3.800;QD=47.05;ReadPosRankSum=1.304;VQSLOD=2.3645;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:8.82:0,9,295	./.	./.	0/0:8,0:6:0:0,0,0	0/0:1,0:1:3.01:0,3,70	./.	0/0:1,0:1:2.99:0,3,24	1/1:22,0:20:6:81,6,0	0/0:1,0:1:2.99:0,3,24	./.	./.	./.	./.	./.	0/0:6,0:6:3.01:0,3,98	./.	0/0:6,0:6:9.50:0,10,1187	0/0:5,0:5:9.03:0,9,1120	./.	./.	./.	./.	./.	./.	0/0:3,0:3:3.01:0,3,386	./.	0/1:15,7:21:12.22:597,0,12	1/1:1,6:7:18.06:1818,18,0
chr10	99802047	.	AT	A	5720.49	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.420;DP=551;FS=10.323;HRun=2;HaplotypeScore=69.4310;InbreedingCoeff=0.9948;MQ=62.51;MQ0=6;MQRankSum=0.603;QD=35.31;ReadPosRankSum=-0.021;VQSLOD=4.5471;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.19:0,81,1161	0/0:7,0:7:21.07:0,21,304	0/0:26,0:19:56.77:0,57,782	0/0:13,0:8:18.05:0,18,253	0/0:18,0:18:54.18:0,54,809	0/0:31,0:31:90.30:0,90,1347	0/0:8,0:8:24.08:0,24,350	1/1:2,29:30:72.23:935,72,0	0/0:24,0:24:69.22:0,69,1014	0/0:21,0:21:60.20:0,60,882	0/0:17,0:17:42.13:0,42,601	0/0:20,0:20:60.20:0,60,898	0/0:28,0:28:84.24:0,84,1231	0/0:17,0:17:48.16:0,48,702	0/0:24,0:24:72.24:0,72,1078	0/0:16,0:16:45.15:0,45,675	0/0:30,0:30:84.28:0,84,1251	0/0:11,0:11:33.11:0,33,492	1/1:0,15:15:45.15:583,45,0	1/1:0,29:29:84.27:1088,84,0	1/1:0,24:24:69.22:896,69,0	0/0:11,0:11:33.11:0,33,494	0/0:6,0:6:18.06:0,18,270	0/0:24,0:24:72.24:0,72,1077	0/0:8,0:8:24.08:0,24,358	1/1:0,21:20:57.19:740,57,0	1/1:0,34:34:93.30:1207,93,0	1/1:0,8:8:21.07:272,21,0
chr10	99803032	.	AATG	A	6040.10	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.929;DP=620;FS=1.668;HRun=0;HaplotypeScore=86.9554;InbreedingCoeff=0.9749;MQ=53.50;MQ0=10;MQRankSum=-5.179;QD=40.54;ReadPosRankSum=-1.781;VQSLOD=4.9917;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:99:0,108,2473	0/0:14,0:14:42.14:0,42,947	0/0:16,0:5:15.05:0,15,319	0/0:18,0:12:5.11:0,5,529	0/0:26,0:26:72.25:0,72,1639	0/0:28,0:28:75.26:0,75,1712	0/0:16,0:16:42.14:0,42,949	1/1:2,15:16:39.13:664,39,0	0/0:24,0:24:69.24:0,69,1514	0/0:26,0:26:78.27:0,78,1790	0/0:22,0:20:60.21:0,60,1372	0/0:16,0:16:48.16:0,48,1105	0/0:21,0:21:63.22:0,63,1442	0/0:25,0:25:69.03:0,69,1588	0/0:42,0:42:99:0,123,2818	0/0:12,0:12:33.11:0,33,717	0/0:22,0:22:57.20:0,57,1297	0/0:23,0:21:57.20:0,57,1304	1/1:4,16:17:45.15:742,45,0	1/1:1,24:24:63.22:1061,63,0	1/1:4,15:17:36.05:529,36,0	0/0:20,0:20:54.19:0,54,1228	0/0:17,0:17:48.16:0,48,1106	0/0:24,0:24:60.21:0,60,1383	0/0:18,0:18:51.18:0,51,1176	1/1:0,23:20:60.19:997,60,0	1/1:0,26:26:63.22:1074,63,0	1/1:0,19:19:57.20:972,57,0
chr10	99803264	.	GT	G	5539.29	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=11.200;DP=579;FS=1.480;HRun=9;HaplotypeScore=64.5524;InbreedingCoeff=0.9951;MQ=66.52;MQ0=2;MQRankSum=-1.414;QD=21.55;ReadPosRankSum=2.309;VQSLOD=5.7599;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:24:54.02:492,54,0	0/0:7,0:7:21.06:0,21,242	0/0:18,0:14:26.73:0,27,225	0/0:14,0:11:17.98:0,18,197	0/0:37,0:37:87.07:0,87,963	1/1:3,27:30:69.03:631,69,0	0/0:16,0:16:39.12:0,39,450	1/1:5,17:22:19.36:423,19,0	1/1:3,18:21:48.02:439,48,0	0/0:28,0:28:75.15:0,75,822	0/0:33,0:34:91.60:0,92,1039	0/0:14,0:14:42.12:0,42,476	0/0:16,0:16:42.11:0,42,474	0/0:20,0:20:60.17:0,60,682	0/0:25,0:25:72.21:0,72,831	0/0:16,0:16:42.12:0,42,485	1/1:0,17:17:42.02:384,42,0	1/1:1,21:22:54.03:494,54,0	1/1:5,10:13:26.99:241,27,0	1/1:1,20:21:57.02:520,57,0	1/1:3,15:18:39.01:357,39,0	0/0:27,0:27:58.76:0,59,721	0/0:24,0:24:63.14:0,63,705	0/0:12,0:13:30.07:0,30,335	0/0:12,0:12:23.95:0,24,274	1/1:1,31:32:87.05:796,87,0	1/1:2,19:20:16.41:405,16,0	1/1:0,14:14:39.02:357,39,0
chr10	99804585	.	A	AT	3765.70	PASS	AB=0.944;AC=15;AF=0.268;AN=56;BaseQRankSum=-11.183;DP=590;FS=2.896;HRun=8;HaplotypeScore=54.1236;InbreedingCoeff=0.9152;MQ=58.62;MQ0=10;MQRankSum=1.011;QD=22.96;ReadPosRankSum=-0.074;VQSLOD=4.0648;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:66:0,66,597	0/0:9,0:9:21.01:0,21,192	0/0:11,0:8:14.95:0,15,130	0/1:16,1:8:7.17:7,0,80	0/0:30,0:29:72.03:0,72,654	0/0:32,0:31:78:0,78,700	0/0:9,0:9:21.01:0,21,192	1/1:12,14:23:42.07:462,42,0	0/0:16,0:16:45.02:0,45,412	0/0:34,0:32:84.03:0,84,766	0/0:19,0:18:41.94:0,42,382	0/0:13,0:13:36:0,36,324	0/0:26,0:25:66.01:0,66,597	0/0:20,0:19:45.02:0,45,410	0/0:21,0:19:33.01:0,33,299	0/0:18,0:18:45:0,45,405	0/0:30,0:30:72.02:0,72,654	0/0:21,0:21:44.93:0,45,395	1/1:4,12:14:36.11:415,36,0	1/1:5,28:32:75.22:864,75,0	1/1:0,7:7:15.04:173,15,0	0/0:28,0:28:62.92:0,63,569	0/0:22,0:22:53.96:0,54,482	0/0:23,0:23:66:0,66,593	0/0:18,0:18:42.01:0,42,381	1/1:5,24:29:50.74:826,51,0	1/1:5,23:28:69.21:796,69,0	1/1:2,5:7:20.89:222,21,0
chr10	99805660	.	TGG	T	1334.51	PASS	AC=18;AF=0.333;AN=54;BaseQRankSum=8.409;DP=224;FS=9.414;HRun=9;HaplotypeScore=29.7793;InbreedingCoeff=0.8087;MQ=50.57;MQ0=6;MQRankSum=-2.683;QD=19.34;ReadPosRankSum=0.760;VQSLOD=0.3789;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:16:36.10:419,36,0	0/0:1,0:1:3.01:0,3,49	0/0:6,1:2:5.23:0,5,56	0/0:12,0:3:8.99:0,9,88	0/0:7,0:7:12.04:0,12,197	1/1:0,6:6:12.04:140,12,0	0/0:17,0:17:48.16:0,48,786	1/1:5,3:7:9.02:105,9,0	0/0:7,0:7:18.06:0,18,295	0/0:9,0:9:18.06:0,18,295	0/0:3,0:3:9.03:0,9,147	0/0:13,0:13:30.10:0,30,487	0/0:10,0:10:27.09:0,27,439	0/0:7,0:7:15.05:0,15,246	0/0:8,0:8:21.07:0,21,344	0/0:4,0:4:12.04:0,12,197	1/1:0,10:10:27.08:315,27,0	0/0:9,0:8:18.06:0,18,295	./.	1/1:0,1:1:2.97:20,3,0	1/1:0,15:13:30.09:349,30,0	0/0:6,0:6:15.05:0,15,246	0/0:10,0:10:18.06:0,18,291	0/0:10,0:12:35.09:0,35,508	0/0:8,0:8:24.04:0,24,363	1/1:2,4:4:6.01:70,6,0	1/1:1,4:5:6.02:70,6,0	1/1:0,1:1:3.01:35,3,0
chr10	99806575	.	T	TA	203.22	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.095;DP=253;FS=4.337;HRun=9;HaplotypeScore=36.5069;InbreedingCoeff=0.4967;MQ=62.83;MQ0=21;MQRankSum=-1.652;QD=16.94;ReadPosRankSum=-0.604;VQSLOD=2.9846;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:20.98:0,21,182	0/0:4,0:4:12:0,12,104	0/0:10,0:6:4.82:0,5,31	0/0:3,0:2:3.89:0,4,28	0/0:5,0:5:15:0,15,130	1/1:4,8:11:27.07:297,27,0	0/0:12,0:12:32.98:0,33,286	0/0:13,0:11:23.93:0,24,201	0/0:6,0:6:17.96:0,18,148	0/0:12,0:12:35.97:0,36,307	0/0:9,0:9:26.99:0,27,234	0/0:4,0:4:12:0,12,104	0/0:3,0:3:9:0,9,78	0/0:7,0:7:18:0,18,156	0/0:5,0:4:12:0,12,104	0/0:6,0:3:5.99:0,6,52	0/0:22,0:21:41.99:0,42,364	0/0:19,0:15:32.99:0,33,286	0/0:6,0:6:14.99:0,15,130	0/0:7,0:6:14.99:0,15,130	0/0:10,0:10:29.99:0,30,260	0/0:11,0:9:20.99:0,21,182	0/0:5,0:4:9:0,9,78	0/0:12,0:11:29.99:0,30,260	0/0:4,0:3:9:0,9,78	0/0:12,0:11:23.99:0,24,208	0/0:3,0:2:2.99:0,3,26	0/0:12,0:7:14.99:0,15,130
chr10	99808268	.	AAAGG	A	265.79	PASS	AB=1.000;AC=11;AF=0.229;AN=48;BaseQRankSum=5.248;DP=498;FS=2.091;HRun=0;HaplotypeScore=122.9647;InbreedingCoeff=0.4468;MQ=66.98;MQ0=8;MQRankSum=-2.719;QD=2.01;ReadPosRankSum=-0.355;VQSLOD=2.5411;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:2.82:21,3,0	0/0:11,0:10:18.04:0,18,319	./.	./.	0/0:20,0:20:15.01:0,15,178	./.	0/0:22,0:19:20.98:0,21,234	./.	1/1:8,7:14:6.02:91,6,0	0/0:16,0:16:15.03:0,15,258	0/0:13,0:13:12.01:0,12,171	0/0:14,0:14:18.01:0,18,258	0/0:14,0:14:18.04:0,18,333	0/0:16,0:16:33.09:0,33,604	0/0:19,0:19:30.06:0,30,543	0/0:29,0:29:45.13:0,45,886	1/1:15,0:15:5.06:36,5,0	1/1:15,11:26:11.92:183,12,0	0/0:12,0:11:5.96:0,6,43	0/0:22,0:22:5.40:0,5,127	0/0:13,0:13:5.88:0,6,36	0/0:13,0:13:12.04:0,12,279	0/0:23,0:23:24.05:0,24,377	0/0:17,0:17:23.64:0,24,403	0/0:17,0:17:15.75:0,16,543	0/1:23,0:22:37.77:38,0,54	0/1:26,0:26:26.06:26,0,98	0/1:11,0:11:13.29:13,0,52
chr10	99808270	.	AG	A	258.03	PASS	AB=0.937;AC=7;AF=0.125;AN=56;BaseQRankSum=6.842;DP=500;FS=2.891;HRun=2;HaplotypeScore=95.7855;InbreedingCoeff=0.5201;MQ=66.72;MQ0=10;MQRankSum=-5.381;QD=2.72;ReadPosRankSum=0.272;VQSLOD=-0.1230;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,2:17:24.70:144,25,0	0/0:11,0:10:30.10:0,30,441	0/0:18,0:12:33.09:0,33,421	0/0:14,0:12:27.03:0,27,346	0/0:22,0:22:63.15:0,63,846	0/0:20,0:20:48.87:0,49,322	0/0:22,0:19:54.13:0,54,770	0/0:22,0:21:21.44:0,21,208	0/0:15,0:14:24.18:0,24,315	0/0:17,0:16:45.15:0,45,652	0/0:13,0:13:39.11:0,39,548	0/0:14,0:14:42.14:0,42,616	0/0:14,0:14:42.12:0,42,599	0/0:15,0:15:45.11:0,45,608	0/0:18,1:19:54.16:0,54,759	0/0:30,0:30:87.27:0,87,1248	1/1:13,2:15:42.25:211,42,0	0/0:26,0:26:47.83:0,48,593	0/0:12,0:11:31.94:0,32,185	0/0:19,3:22:49.82:0,50,388	0/1:15,0:14:15.71:16,0,220	0/0:13,0:13:33.10:0,33,467	0/0:23,0:23:69.15:0,69,952	0/0:15,0:15:45.15:0,45,665	0/0:17,0:17:34.29:0,34,614	0/1:22,2:23:18.76:19,0,290	0/1:21,3:24:9.22:9,0,312	0/0:10,1:11:15.45:0,15,167
chr10	99808271	.	G	GA	926.96	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.018;DP=502;FS=2.303;HRun=3;HaplotypeScore=95.2227;InbreedingCoeff=0.9563;MQ=66.54;MQ0=12;MQRankSum=-4.422;QD=29.90;ReadPosRankSum=1.273;VQSLOD=3.2154;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,10:16:24.73:434,25,0	0/0:12,0:11:30.10:0,30,418	0/0:18,0:12:32.67:0,33,382	0/0:14,0:12:9.34:0,9,292	0/0:23,0:22:63.19:0,63,845	0/0:20,0:19:52.62:0,53,324	0/0:23,0:20:54.18:0,54,751	0/0:21,0:20:27.40:0,27,232	0/0:15,0:14:26.95:0,27,330	0/0:18,0:17:45.62:0,46,623	0/0:13,0:13:39.13:0,39,541	0/0:15,0:15:42.14:0,42,586	0/0:14,0:14:42.14:0,42,585	0/0:15,0:15:45.14:0,45,610	0/0:19,0:19:54.18:0,54,751	0/0:30,0:30:87.29:0,87,1214	1/1:2,13:15:45.15:614,45,0	0/0:26,0:26:53.40:0,53,631	0/0:12,0:11:31.64:0,32,175	0/0:22,0:22:50.07:0,50,371	0/0:15,0:14:14.06:0,14,248	0/0:11,0:11:33.11:0,33,459	0/0:23,0:23:69.22:0,69,940	0/0:16,0:16:45.15:0,45,629	0/0:17,0:17:44.10:0,44,592	0/0:24,0:23:33.75:0,34,328	0/0:24,0:24:37.12:0,37,345	0/0:11,0:11:18.03:0,18,161
chr10	99808273	.	AAGGAAGGAAGGAAGGAAGGAAGG	A	4427.26	PASS	AB=0.947;AC=10;AF=0.179;AN=56;BaseQRankSum=11.701;DP=497;FS=4.727;HRun=0;HaplotypeScore=293.8327;InbreedingCoeff=0.2449;MQ=65.64;MQ0=12;MQRankSum=-7.145;QD=32.79;ReadPosRankSum=7.577;VQSLOD=2.2699;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:15:59.18:625,0,59	0/0:12,0:11:33.10:0,33,2024	0/0:17,0:11:23.22:0,23,341	0/0:14,0:12:20.15:0,20,256	0/0:23,0:22:63.14:0,63,2355	0/0:20,0:19:5.33:0,5,129	0/0:23,0:20:57.19:0,57,2261	0/0:20,0:19:30.61:0,31,177	0/0:15,0:14:27.09:0,27,978	0/0:18,0:17:48.16:0,48,2163	0/0:13,0:13:33.10:0,33,1304	0/0:15,0:15:45.15:0,45,2103	0/0:15,0:15:42.14:0,42,2560	0/0:15,0:15:45.15:0,45,3388	0/0:20,0:20:54.18:0,54,3790	0/0:30,0:30:90.28:0,90,5408	1/1:15,0:15:45.15:1042,45,0	0/0:27,0:27:58.03:0,58,1971	0/1:12,0:11:30.12:30,0,70	0/1:19,3:22:85.18:676,0,85	0/1:14,0:13:43.63:197,0,44	0/0:10,0:10:30.08:0,30,1571	0/0:21,0:21:63.20:0,63,2768	0/0:16,0:16:48.16:0,48,2989	0/0:18,0:18:53.67:0,54,3767	0/1:20,2:21:99:555,0,496	0/1:20,3:23:41.99:688,0,42	1/1:11,1:12:12.65:614,13,0
chr10	99808514	.	CAAA	C	3156.14	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=6.170;DP=442;FS=1.590;HRun=13;HaplotypeScore=66.4970;InbreedingCoeff=0.9285;MQ=56.24;MQ0=2;MQRankSum=-0.607;QD=22.71;ReadPosRankSum=2.649;VQSLOD=2.7184;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:17.05:0,17,175	0/0:5,0:5:15.05:0,15,288	0/0:11,0:6:12.90:0,13,123	0/0:13,0:4:2.57:0,3,23	0/0:21,0:23:57.15:0,57,981	1/1:4,12:18:34.44:435,34,0	0/0:9,0:11:30.06:0,30,501	1/1:5,16:21:37.35:448,37,0	0/0:5,0:14:27.08:0,27,364	0/0:22,0:24:51.15:0,51,907	0/0:18,0:18:39.13:0,39,739	0/0:14,0:16:39.09:0,39,651	0/0:19,0:19:39.13:0,39,739	0/0:4,0:12:12.04:0,12,195	0/0:20,0:23:45.15:0,45,850	0/0:14,0:17:39.09:0,39,667	0/0:12,0:12:25.35:0,25,264	0/0:4,0:20:36.12:0,36,529	1/1:2,8:10:7.67:257,8,0	1/1:4,25:29:19.61:685,20,0	1/1:7,4:11:8.99:109,9,0	0/0:13,0:13:30.10:0,30,577	0/0:13,0:15:24.08:0,24,433	0/0:6,0:7:14.75:0,15,272	0/0:16,0:17:45.13:0,45,830	1/1:1,18:19:54.16:657,54,0	1/1:3,11:14:33.02:383,33,0	1/1:3,10:14:32.99:383,33,0
chr10	99809100	.	TATACATCATATACATATA	T	6120.68	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=11.447;DP=598;FS=10.297;HRun=0;HaplotypeScore=251.7727;InbreedingCoeff=0.6490;MQ=50.36;MQ0=8;MQRankSum=-8.713;QD=27.57;ReadPosRankSum=0.292;VQSLOD=1.6844;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:21:30.17:97,0,30	0/0:11,0:11:21.07:0,21,975	0/0:2,0:2:6.02:0,6,233	0/0:1,0:1:3.01:0,3,117	0/0:28,0:28:84.29:0,84,4222	0/0:26,0:26:10.58:0,11,86	0/0:14,0:14:24.08:0,24,913	1/1:38,0:32:29.95:608,30,0	0/0:27,0:23:42.14:0,42,1749	0/0:30,0:30:90.31:0,90,4359	0/0:29,0:29:87.28:0,87,4499	0/0:20,0:20:54.19:0,54,2674	0/0:28,0:28:84.27:0,84,3582	0/0:30,0:30:90.31:0,90,4234	0/0:26,0:26:78.27:0,78,3926	0/0:17,0:17:51.17:0,51,2241	0/1:19,0:19:99:188,0,114	0/0:17,0:17:46.06:0,46,2026	1/1:4,19:22:57.19:1783,57,0	1/1:0,32:32:9.03:448,9,0	0/1:9,0:10:12.46:53,0,12	0/0:8,0:8:24.07:0,24,878	0/0:18,0:18:54.19:0,54,2663	0/0:9,0:9:27.09:0,27,1254	0/0:35,0:35:99:0,105,4597	1/1:0,30:30:57.20:2024,57,0	1/1:0,33:33:9.03:441,9,0	1/1:0,13:13:9.03:479,9,0
chr10	99809103	.	ACAT	A	1519.90	PASS	AB=0.852;AC=15;AF=0.268;AN=56;BaseQRankSum=11.671;DP=606;FS=17.396;HRun=0;HaplotypeScore=131.9806;InbreedingCoeff=0.4112;MQ=50.72;MQ0=7;MQRankSum=-8.011;QD=6.10;ReadPosRankSum=1.072;VQSLOD=1.8010;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,10:20:2.82:50,3,0	0/0:9,1:10:21.07:0,21,364	0/0:3,0:3:9.03:0,9,156	0/0:1,0:1:3.01:0,3,52	0/0:30,0:30:87.30:0,87,1652	0/1:18,8:26:12.78:72,0,13	0/0:15,0:15:26.98:0,27,475	0/1:34,4:32:83.17:83,0,1103	0/0:29,0:25:39.13:0,39,706	0/0:32,0:32:90.31:0,90,1676	0/0:30,0:30:90.31:0,90,1720	0/0:23,0:23:60.21:0,60,1129	0/0:29,0:29:84.29:0,84,1507	0/0:31,0:31:90.29:0,90,1651	0/0:26,0:26:75.26:0,75,1405	0/0:16,0:16:48.15:0,48,844	0/1:11,6:17:74.33:77,0,74	0/1:14,3:17:56.69:57,0,689	0/1:22,0:22:40.91:488,0,41	1/1:32,0:32:8.01:57,8,0	0/0:11,1:10:1.57:0,2,19	0/0:7,0:7:21.06:0,21,344	0/0:19,0:19:57.20:0,57,1058	0/0:9,0:9:27.09:0,27,487	0/0:35,0:35:99:0,99,1777	1/1:30,0:30:46.18:659,46,0	1/1:33,0:33:8.95:88,9,0	1/1:13,0:13:8.90:60,9,0
chr10	99809106	.	T	TATA	1380.23	PASS	AB=0.947;AC=12;AF=0.214;AN=56;BaseQRankSum=10.848;DP=609;FS=17.072;HRun=0;HaplotypeScore=135.2589;InbreedingCoeff=0.2504;MQ=51.59;MQ0=7;MQRankSum=-7.356;QD=5.87;ReadPosRankSum=0.388;VQSLOD=1.9094;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,7:20:1.36:44,1,0	0/0:10,0:10:21.07:0,21,390	0/0:4,0:3:9.03:0,9,167	0/0:4,0:3:5.95:0,6,74	0/0:31,0:31:90.31:0,90,1646	1/1:11,13:26:5.93:89,6,0	0/0:16,0:16:29.98:0,30,525	0/1:37,0:32:83.17:83,0,1103	0/0:15,11:22:39.13:0,39,722	0/0:32,0:32:96.32:0,96,1731	0/0:30,0:30:90.31:0,90,1671	0/0:22,0:22:60.21:0,60,1104	0/0:30,0:30:87.30:0,87,1590	0/0:30,0:30:90.29:0,90,1630	0/0:25,0:25:75.26:0,75,1377	0/0:17,0:17:51.15:0,51,886	0/1:10,6:17:73.27:77,0,73	0/1:16,1:17:57.52:58,0,649	0/1:22,0:22:63.47:455,0,63	0/1:32,0:32:13.61:29,0,14	0/0:9,2:9:1.55:0,2,5	0/0:7,0:7:21.06:0,21,359	0/0:19,0:19:57.20:0,57,1058	0/0:11,0:11:33.11:0,33,581	0/0:35,0:35:99:0,102,1847	1/1:30,0:30:45.71:646,46,0	0/1:33,0:33:12.56:53,0,13	0/0:13,0:13:8.95:0,9,66
chr10	99809115	.	TATA	T	2139.18	PASS	AB=0.841;AC=14;AF=0.250;AN=56;BaseQRankSum=10.462;DP=622;FS=5.847;HRun=0;HaplotypeScore=134.1555;InbreedingCoeff=0.5396;MQ=55.54;MQ0=5;MQRankSum=-9.539;QD=9.47;ReadPosRankSum=0.026;VQSLOD=2.7143;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,10:21:7.12:114,7,0	0/0:9,1:10:21.07:0,21,518	0/0:6,0:4:9.03:0,9,222	0/0:8,0:6:6.02:0,6,120	0/0:35,0:35:99:0,105,2356	0/1:14,11:25:2.93:3,0,15	0/0:17,0:17:35.80:0,36,722	0/1:28,4:28:99:371,0,679	0/0:29,0:26:51.17:0,51,1201	0/0:32,0:32:96.33:0,96,2283	0/0:28,0:28:84.29:0,84,1999	0/0:22,0:22:60.19:0,60,1373	0/0:29,0:29:84.27:0,84,1859	0/0:26,0:26:78.24:0,78,1725	0/0:26,0:26:78.25:0,78,1750	0/0:20,0:20:60.21:0,60,1394	0/1:13,5:18:41.19:94,0,41	0/0:20,0:20:55.04:0,55,1170	0/1:21,0:21:62.99:647,0,63	1/1:32,0:32:8.39:75,8,0	0/0:11,1:10:3.45:0,3,23	0/0:9,0:9:27.08:0,27,560	0/0:20,0:20:60.21:0,60,1431	0/0:10,0:10:30.10:0,30,738	0/0:37,0:37:99:0,111,2560	1/1:30,0:30:48.16:802,48,0	1/1:33,0:33:9.02:113,9,0	1/1:13,0:13:9.02:89,9,0
chr10	99809118	.	A	ACAT	2362.89	PASS	AB=0.948;AC=12;AF=0.214;AN=56;BaseQRankSum=7.270;DP=631;FS=8.578;HRun=0;HaplotypeScore=133.5739;InbreedingCoeff=0.5103;MQ=56.60;MQ0=5;MQRankSum=-8.092;QD=10.84;ReadPosRankSum=-0.861;VQSLOD=2.3213;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,4:21:6.21:104,6,0	0/0:11,0:11:24.08:0,24,394	0/0:7,0:5:12:0,12,170	0/0:9,0:6:5.75:0,6,95	0/0:34,0:34:96.30:0,96,1549	1/1:17,10:27:0.18:64,0,0	0/0:15,0:15:29.80:0,30,470	0/1:25,9:30:99:654,0,269	0/0:30,0:27:54.17:0,54,874	0/0:33,0:33:99:0,99,1615	0/0:30,0:30:84.28:0,84,1370	0/0:22,0:22:57.19:0,57,949	0/0:27,0:27:75.26:0,75,1248	0/0:24,0:24:69.21:0,69,1121	0/0:26,0:26:72.25:0,72,1199	0/0:20,0:20:60.16:0,60,946	1/1:10,8:18:4.10:98,4,0	0/0:20,0:20:50.30:0,50,803	0/1:21,0:21:13.77:702,0,14	0/1:32,0:32:2.25:36,0,2	0/0:8,6:12:1.55:0,2,5	0/0:8,0:8:24.08:0,24,400	0/0:22,0:22:63.21:0,63,1034	0/0:11,0:11:33.10:0,33,524	0/0:37,0:37:99:0,108,1763	1/1:31,0:31:48.03:791,48,0	0/1:33,0:33:1.25:65,0,1	0/0:13,0:13:7.79:0,8,30
chr10	99809121	.	TATA	T	242.73	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=10.752;DP=640;FS=12.459;HRun=0;HaplotypeScore=140.5028;InbreedingCoeff=0.0813;MQ=56.74;MQ0=5;MQRankSum=-9.392;QD=1.61;ReadPosRankSum=2.448;VQSLOD=1.9267;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,2:22:3.66:0,4,55	0/0:11,0:11:24.08:0,24,564	0/0:7,0:5:12.04:0,12,258	0/0:9,0:6:9.03:0,9,165	0/0:33,0:33:99:0,99,2221	0/0:25,4:29:10.35:0,10,184	0/0:17,0:17:35.86:0,36,773	0/0:34,0:30:20.47:0,20,900	0/0:34,0:31:63.22:0,63,1379	0/0:33,0:33:99:0,99,2325	0/0:28,0:28:84.29:0,84,1991	0/0:22,0:22:60.21:0,60,1394	0/0:26,0:26:75.26:0,75,1749	0/0:23,0:23:69.21:0,69,1598	0/0:26,0:26:78.27:0,78,1767	0/0:20,0:20:60.19:0,60,1374	1/1:17,1:18:5.01:33,5,0	0/0:20,0:20:53.31:0,53,1171	0/1:21,0:21:99:117,0,178	0/1:33,0:33:13.23:13,0,42	0/0:14,0:12:6.46:0,6,69	0/0:10,0:10:30.10:0,30,625	0/0:23,0:23:69.24:0,69,1560	0/0:11,0:11:33.11:0,33,785	0/0:36,0:36:99:0,108,2475	0/1:32,0:32:99:156,0,113	0/1:33,0:33:24.65:25,0,73	0/1:14,0:14:24.93:25,0,35
chr10	99810021	.	T	TAA	2811.32	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-5.311;DP=589;FS=1.458;HRun=14;HaplotypeScore=95.5223;InbreedingCoeff=0.9130;MQ=74.25;MQ0=1;MQRankSum=-1.999;QD=15.45;ReadPosRankSum=-4.686;VQSLOD=1.7180;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:40:76.64:0,77,326	0/0:5,0:5:5.94:0,6,50	0/0:20,0:14:2.23:0,2,31	0/0:19,0:15:3.94:0,4,25	0/0:25,0:27:30.33:0,30,233	1/1:3,9:15:23.38:249,23,0	0/0:16,0:17:29.81:0,30,292	1/1:13,16:34:57.28:574,57,0	0/0:20,0:23:38.46:0,38,313	0/0:18,0:19:29.41:0,29,231	0/0:18,0:20:26.40:0,26,254	0/0:13,0:13:23.62:0,24,184	0/0:18,0:18:17.49:0,17,150	0/0:13,0:15:29.59:0,30,237	0/0:18,0:20:29.14:0,29,224	0/0:13,0:16:17.50:0,18,215	0/0:4,0:37:82.29:0,82,351	0/0:24,0:24:43.34:0,43,374	1/1:2,7:9:14.40:153,14,0	1/1:11,17:30:62.35:695,62,0	1/1:3,11:16:32.39:355,32,0	0/0:18,0:18:38.74:0,39,322	0/0:25,0:26:35.18:0,35,287	0/0:8,0:8:11.84:0,12,100	0/0:17,0:20:32.48:0,32,262	1/1:8,6:25:35.34:359,35,0	1/1:8,18:29:37.80:426,38,0	1/1:9,12:22:18.67:202,19,0
chr10	99811396	.	AAC	A	65.57	PASS	AB=0.917;AC=9;AF=0.188;AN=48;BaseQRankSum=2.614;DP=442;FS=0.000;HRun=0;HaplotypeScore=60.7778;InbreedingCoeff=0.1139;MQ=68.98;MQ0=5;MQRankSum=-0.189;QD=0.56;ReadPosRankSum=1.720;VQSLOD=0.7205;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:40:3.01:0,3,33	0/0:7,0:7:6.02:0,6,88	./.	./.	0/1:7,1:8:42.13:52,0,42	0/1:11,0:15:0.02:0,0,0	0/0:23,0:22:3.01:0,3,44	0/0:13,0:12:5.92:0,6,39	1/1:15,0:16:3.31:15,3,0	0/0:9,0:9:11.95:0,12,147	./.	0/1:14,2:16:25.94:26,0,37	0/1:9,1:10:15.12:15,0,143	0/0:17,0:17:12.01:0,12,151	0/0:27,0:27:15.05:0,15,220	0/0:9,0:8:6.02:0,6,79	0/0:16,0:14:5.98:0,6,47	1/1:9,0:17:8.52:42,9,0	0/0:16,0:15:14.87:0,15,116	0/0:10,0:9:3:0,3,26	0/0:16,0:16:2.88:0,3,39	./.	0/0:8,0:7:6:0,6,83	0/1:31,4:35:36.97:37,0,212	0/0:13,0:13:12.01:0,12,134	0/0:21,0:21:34.12:0,34,310	0/0:10,0:10:8.98:0,9,97	0/0:6,0:6:2.97:0,3,20
chr10	99811402	.	C	CACACACAT	732.71	PASS	AB=0.951;AC=8;AF=0.143;AN=56;BaseQRankSum=3.762;DP=485;FS=1.519;HRun=0;HaplotypeScore=120.8535;InbreedingCoeff=-0.0321;MQ=59.13;MQ0=9;MQRankSum=-0.903;QD=4.73;ReadPosRankSum=1.654;VQSLOD=2.4722;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:46,0:43:1.78:352,0,2	0/0:8,0:8:17.87:0,18,241	0/0:13,0:8:11.88:0,12,96	0/0:24,0:17:39.07:0,39,406	0/0:8,0:8:14.80:0,15,204	0/0:20,0:19:11.85:0,12,157	0/0:25,0:23:38.89:0,39,377	0/0:11,0:10:14.43:0,14,89	0/0:20,0:18:38.78:0,39,334	0/0:9,0:9:23.83:0,24,311	0/0:7,0:7:17.81:0,18,136	0/0:18,0:18:41.89:0,42,428	0/0:13,0:13:32.74:0,33,431	0/0:21,0:21:50.90:0,51,519	0/0:32,0:32:75.37:0,75,822	0/0:12,0:11:23.91:0,24,190	0/1:7,8:18:14.85:121,0,15	0/0:19,0:19:32.73:0,33,349	0/1:19,0:18:2.15:2,0,146	0/1:11,0:10:11.96:111,0,12	0/1:21,0:19:4.94:5,0,123	0/0:8,0:8:11.82:0,12,85	0/0:11,0:10:11.97:0,12,96	0/0:35,0:35:62.54:0,63,801	0/0:16,0:16:26.98:0,27,280	0/1:22,0:22:99:187,0,145	0/1:11,0:11:53.13:53,0,105	0/1:5,0:5:29.28:29,0,34
chr10	99812309	.	A	AAGAGGGAGAGAG	2288.67	PASS	AB=0.909;AC=12;AF=0.214;AN=56;BaseQRankSum=3.230;DP=275;FS=7.657;HRun=0;HaplotypeScore=95.0534;InbreedingCoeff=0.1496;MQ=64.11;MQ0=11;MQRankSum=-5.057;QD=24.61;ReadPosRankSum=-3.439;VQSLOD=0.8568;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:14.96:65,0,15	0/0:3,0:3:9.03:0,9,330	0/0:45,0:16:29.46:0,29,268	0/0:44,0:15:9.16:0,9,88	0/0:6,0:6:15.02:0,15,329	0/1:2,0:5:1.81:50,0,2	0/0:6,0:6:11.79:0,12,301	0/1:19,0:19:99:371,0,210	0/0:2,0:2:2.84:0,3,14	0/0:7,0:5:15.02:0,15,223	0/0:8,0:8:24.04:0,24,486	0/0:4,0:4:11.25:0,11,326	0/0:5,0:5:9.03:0,9,334	0/0:6,0:6:12.02:0,12,338	0/0:12,0:11:20.99:0,21,472	0/0:7,0:7:18.04:0,18,514	0/1:7,0:7:4.99:5,0,368	0/0:2,0:2:5.95:0,6,42	1/1:7,0:9:15.05:372,15,0	0/1:11,0:11:48.87:49,0,52	0/1:4,0:4:10.97:149,0,11	0/0:2,0:3:9.02:0,9,228	0/0:4,0:5:11.98:0,12,247	0/0:6,0:6:15.05:0,15,529	0/0:11,0:11:30.09:0,30,975	1/1:8,0:8:4.09:592,4,0	0/1:5,1:10:17.54:462,0,18	0/1:7,0:5:6.90:325,0,7
chr10	99813276	.	CAGAATG	C	932.71	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.585;DP=560;FS=0.966;HRun=0;HaplotypeScore=120.4122;InbreedingCoeff=0.9425;MQ=61.42;MQ0=4;MQRankSum=-5.727;QD=46.64;ReadPosRankSum=-2.079;VQSLOD=3.4055;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:45.11:1028,45,0	0/0:3,0:3:9.03:0,9,324	0/0:26,0:20:47.33:0,47,1583	0/0:25,0:25:72.08:0,72,2183	0/0:22,0:22:60.21:0,60,2033	0/0:16,0:16:42.14:0,42,1427	0/0:28,0:28:78.27:0,78,2741	0/0:20,0:20:57.17:0,57,1814	0/0:21,0:21:63.22:0,63,2268	0/0:25,0:25:72.25:0,72,2595	0/0:19,0:19:54.19:0,54,1919	0/0:20,0:20:54.19:0,54,1938	0/0:17,0:17:51.18:0,51,1838	0/0:9,0:9:27.09:0,27,974	0/0:11,0:11:33.11:0,33,1128	0/0:10,0:10:30.10:0,30,1082	0/0:40,0:40:99:0,120,4275	0/0:15,0:15:36.12:0,36,1199	0/0:16,0:15:42.14:0,42,1512	0/0:22,0:21:63.22:0,63,2235	0/0:17,0:17:48.16:0,48,1730	0/0:23,0:23:69.24:0,69,2460	0/0:19,0:19:57.20:0,57,1941	0/0:32,0:32:87.30:0,87,2983	0/0:12,0:11:36.12:0,36,1298	0/0:32,0:32:87.30:0,87,3080	0/0:29,0:29:81.26:0,81,2834	0/0:10,0:10:27.09:0,27,973
chr10	99813344	.	CAAA	C	4295.77	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=12.313;DP=579;FS=39.988;HRun=14;HaplotypeScore=109.4225;InbreedingCoeff=0.9873;MQ=61.69;MQ0=5;MQRankSum=-2.326;QD=18.36;ReadPosRankSum=7.550;VQSLOD=0.3903;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:31:44.60:295,45,0	0/0:4,0:5:14.40:0,14,176	0/0:27,0:15:20.75:0,21,247	0/0:24,0:19:29.08:0,29,347	0/0:29,0:31:73.63:0,74,1076	1/1:4,13:17:26.94:315,27,0	0/0:25,0:27:54.02:0,54,802	1/1:5,16:17:35.95:372,36,0	1/1:5,0:20:29.57:155,30,0	0/0:20,0:23:57.13:0,57,851	0/0:18,0:21:57.05:0,57,765	0/0:16,0:16:34.83:0,35,470	0/0:16,0:16:42.04:0,42,636	0/0:9,0:9:27.08:0,27,434	0/0:12,0:13:39.08:0,39,573	0/0:13,0:13:24.55:0,25,413	0/0:39,0:39:99:0,105,1726	1/1:3,0:16:26.77:113,27,0	1/1:14,10:21:47.82:526,48,0	1/1:2,18:20:50.90:589,51,0	1/1:5,18:23:41.78:490,42,0	0/0:15,0:21:48.41:0,48,666	0/0:15,0:18:37.71:0,38,541	0/0:25,0:25:69.20:0,69,1176	0/0:12,0:15:42.09:0,42,637	1/1:4,24:28:71.95:810,72,0	1/1:5,20:25:44.89:525,45,0	1/1:2,5:7:8.95:105,9,0
chr10	99813347	.	A	AC	2465.50	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=11.578;DP=561;FS=21.032;HRun=0;HaplotypeScore=96.5708;InbreedingCoeff=0.9908;MQ=61.75;MQ0=5;MQRankSum=-3.466;QD=11.06;ReadPosRankSum=5.861;VQSLOD=2.3407;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:30:38.86:171,39,0	0/0:7,0:7:15.27:0,15,142	0/0:26,0:13:33.66:0,34,262	0/0:22,0:18:31.20:0,31,332	0/0:30,0:30:80.54:0,81,892	1/1:16,0:16:30.83:153,31,0	0/0:26,0:26:66.28:0,66,761	1/1:19,0:15:37.56:278,38,0	1/1:18,1:18:49.69:243,50,0	0/0:24,0:24:64.33:0,64,740	0/0:21,1:22:47.32:0,47,662	0/0:15,0:15:37.78:0,38,371	0/0:14,0:14:40.81:0,41,428	0/0:9,0:9:24.53:0,25,302	0/0:13,0:13:36.95:0,37,434	0/0:13,0:13:26.68:0,27,343	0/0:38,0:38:99:0,114,1374	1/1:16,0:16:33.42:169,33,0	1/1:20,4:21:61.19:435,61,0	1/1:20,0:20:54.29:298,54,0	1/1:22,0:22:49.89:252,50,0	0/0:20,0:20:39.08:0,39,425	0/0:17,0:17:46.43:0,46,529	0/0:26,0:26:72.06:0,72,865	0/0:15,0:15:42.99:0,43,524	1/1:25,0:25:70.06:400,70,0	1/1:25,0:25:49.61:242,50,0	1/1:6,0:6:10.32:50,10,0
chr10	99813817	.	CTCTGTCTGTCTGTCTG	C	7159.62	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=9.908;DP=664;FS=0.000;HRun=0;HaplotypeScore=265.6146;InbreedingCoeff=0.9405;MQ=60.91;MQ0=9;MQRankSum=-6.330;QD=39.56;ReadPosRankSum=-0.312;VQSLOD=3.4509;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,18:28:7.75:967,8,0	0/0:3,0:3:9.03:0,9,671	0/0:39,0:25:48.16:0,48,2573	0/0:60,0:35:62.56:0,63,3456	0/0:32,0:32:81.28:0,81,5102	0/0:23,0:23:42.14:0,42,1989	0/0:21,0:22:57.20:0,57,3368	1/1:18,24:42:59.79:1053,60,0	0/0:19,0:19:54.19:0,54,2852	0/0:38,0:38:90.30:0,90,5973	0/0:17,0:17:42.14:0,42,2580	0/0:15,0:15:33.11:0,33,2023	0/0:19,0:19:56.41:0,56,3976	0/0:20,0:20:51.18:0,51,3643	0/0:24,0:24:60.21:0,60,3812	0/0:19,0:20:54.19:0,54,3686	0/0:33,0:33:90.03:0,90,5516	0/0:16,0:16:41.88:0,42,1934	1/1:12,12:24:36.10:1048,36,0	1/1:10,11:20:21.07:861,21,0	./.	0/0:8,0:8:21.07:0,21,1192	0/0:15,0:15:36.12:0,36,2149	0/0:24,0:24:63.22:0,63,4203	0/0:22,0:22:48.16:0,48,3258	1/1:9,14:23:42.13:1764,42,0	1/1:15,18:32:30.10:1333,30,0	1/1:3,6:9:3.01:134,3,0
chr10	99813823	.	CTG	C	2235.49	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=14.103;DP=681;FS=2.966;HRun=0;HaplotypeScore=119.7249;InbreedingCoeff=0.3499;MQ=59.36;MQ0=13;MQRankSum=-5.894;QD=12.85;ReadPosRankSum=5.149;VQSLOD=3.6561;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:28:25.69:26,0,64	0/0:3,0:3:9.03:0,9,174	0/0:50,1:30:74.57:0,75,1122	0/0:66,2:40:69.77:0,70,1262	0/0:34,0:34:99:0,99,1757	1/1:2,19:22:45.15:670,45,0	0/0:25,0:25:65.69:0,66,1169	0/0:39,0:39:1.64:0,2,622	1/1:0,19:19:54.18:826,54,0	0/0:37,0:37:99:0,111,1990	0/0:18,0:18:51.17:0,51,892	0/0:14,0:14:42.13:0,42,718	0/0:21,0:21:52.77:0,53,1092	0/0:20,0:20:60.20:0,60,1080	0/0:27,0:27:81.26:0,81,1451	0/0:20,1:21:10.77:0,11,955	0/0:36,0:36:99:0,102,1833	1/1:0,16:16:45.15:680,45,0	0/1:22,0:22:34.35:34,0,240	0/1:20,0:19:14.74:15,0,190	0/0:15,0:14:6.02:0,6,85	0/0:11,0:11:33.11:0,33,585	0/0:14,0:14:42.14:0,42,749	0/0:24,0:24:69.22:0,69,1237	0/0:20,0:20:57.19:0,57,1039	0/1:18,0:18:87:87,0,111	0/1:28,0:27:60.53:61,0,91	0/0:9,0:9:0.97:0,1,118
chr10	99813831	.	CTG	C	1364.12	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=12.845;DP=658;FS=1.531;HRun=0;HaplotypeScore=121.7952;InbreedingCoeff=0.6859;MQ=62.64;MQ0=14;MQRankSum=-6.804;QD=10.10;ReadPosRankSum=0.574;VQSLOD=3.5814;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,1:26:24.49:159,24,0	0/0:4,0:4:12.04:0,12,217	0/0:53,0:29:74.77:0,75,1135	0/0:78,1:47:55.55:0,56,1483	0/0:30,0:30:87.30:0,87,1586	0/0:22,0:22:51.11:0,51,751	0/0:24,0:24:65.73:0,66,1206	0/1:31,0:30:71.36:572,0,71	0/0:20,0:20:57.18:0,57,886	0/0:35,0:35:99:0,105,1876	0/0:17,0:17:51.17:0,51,894	0/0:11,0:11:33.11:0,33,606	0/0:21,0:21:52.66:0,53,1093	0/0:19,0:19:57.18:0,57,1021	0/0:25,0:25:75.26:0,75,1384	0/0:21,0:21:56.71:0,57,1070	0/0:42,0:42:99:0,120,2093	0/0:14,0:14:42.12:0,42,597	1/1:14,0:14:17.46:348,17,0	1/1:12,1:12:20.44:144,20,0	0/0:10,5:14:0:0,0,0	0/0:11,0:11:33.11:0,33,586	0/0:16,0:16:48.16:0,48,829	0/0:25,0:25:69.24:0,69,1257	0/0:19,0:19:51.17:0,51,954	0/1:16,0:16:0.76:168,0,1	1/1:24,1:24:6.86:127,7,0	0/1:9,0:9:9.30:9,0,14
chr10	99813938	.	GC	G	4206.42	PASS	AB=0.927;AC=24;AF=0.429;AN=56;BaseQRankSum=14.075;DP=470;FS=12.138;HRun=10;HaplotypeScore=69.0620;InbreedingCoeff=0.6712;MQ=64.72;MQ0=1;MQRankSum=-2.500;QD=16.06;ReadPosRankSum=0.498;VQSLOD=3.1196;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:33:51.40:150,51,0	0/0:4,0:4:12.03:0,12,133	0/0:8,1:8:8.94:0,9,84	0/1:11,1:11:20.54:27,0,21	0/0:12,1:13:4:0,4,251	0/0:22,0:21:48.11:0,48,522	0/1:10,0:10:2.47:2,0,178	1/1:6,22:28:68.97:597,69,0	1/1:3,16:19:44.99:391,45,0	0/0:14,0:14:29.97:0,30,303	0/0:13,1:14:3.99:0,4,249	0/0:13,1:14:13.02:0,13,354	0/1:12,2:14:13.01:13,0,326	0/0:15,1:16:19.02:0,19,409	0/0:15,0:15:30.07:0,30,323	0/0:20,2:22:2.09:0,2,478	0/0:19,1:20:28.09:0,28,538	1/1:1,15:17:47.03:397,47,0	1/1:5,12:17:35.90:299,36,0	1/1:0,20:20:56.97:490,57,0	1/1:6,25:31:68.92:593,69,0	0/1:9,1:10:5.02:5,0,162	0/0:12,0:12:27.06:0,27,289	0/0:20,0:20:54.13:0,54,589	0/0:13,0:13:36.07:0,36,382	1/1:1,21:22:59.98:520,60,0	1/1:0,20:20:56.99:494,57,0	1/1:0,9:9:26.95:227,27,0
chr10	99814105	.	AT	A	483.32	PASS	AB=0.912;AC=5;AF=0.089;AN=56;BaseQRankSum=4.569;DP=517;FS=0.000;HRun=10;HaplotypeScore=63.3998;InbreedingCoeff=0.3877;MQ=73.43;MQ0=0;MQRankSum=-1.223;QD=7.11;ReadPosRankSum=0.038;VQSLOD=1.3844;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:27:65.97:573,66,0	0/0:7,0:7:21.05:0,21,225	0/1:11,1:12:5.63:6,0,197	0/1:9,1:10:10.87:11,0,71	0/0:23,0:23:69.19:0,69,763	0/0:24,0:26:71.85:0,72,751	0/0:12,0:12:36.08:0,36,388	0/0:24,0:24:60.16:0,60,664	0/0:11,0:11:30.08:0,30,332	0/0:26,0:26:63.14:0,63,684	0/0:26,0:26:47.97:0,48,709	0/0:15,0:15:20.21:0,20,410	0/0:16,0:16:45.11:0,45,490	0/0:15,0:15:42.10:0,42,456	0/0:15,0:15:39.11:0,39,431	0/0:16,0:16:33.09:0,33,365	0/0:28,0:28:69.19:0,69,763	0/0:24,0:24:66.18:0,66,730	0/1:16,2:19:4.15:4,0,398	0/0:33,0:35:90.02:0,90,954	0/0:14,0:14:36.10:0,36,398	0/0:16,0:16:42.11:0,42,465	0/0:18,1:19:22.08:0,22,472	0/0:13,0:13:33.09:0,33,365	0/0:23,1:24:37.12:0,37,638	0/0:16,0:16:42.11:0,42,465	0/0:24,0:24:63.17:0,63,697	0/0:4,0:4:9.02:0,9,100
chr10	99814271	.	TAG	T	2022.29	PASS	AB=0.516;AC=5;AF=0.089;AN=56;BaseQRankSum=10.385;DP=565;FS=5.966;HRun=0;HaplotypeScore=68.6490;InbreedingCoeff=0.8027;MQ=84.93;MQ0=0;MQRankSum=-2.073;QD=31.60;ReadPosRankSum=1.664;VQSLOD=5.4249;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,1872	0/0:3,0:3:9.03:0,9,156	0/0:32,0:32:87.28:0,87,1447	0/0:15,0:15:33.11:0,33,544	0/0:32,0:32:87.28:0,87,1461	1/1:2,19:21:51.17:679,51,0	0/0:20,0:20:60.21:0,60,1033	0/0:22,0:22:57.20:0,57,985	1/1:0,27:27:72.24:959,72,0	0/0:19,0:19:57.20:0,57,986	0/0:14,0:14:39.12:0,39,643	0/0:13,0:13:39.12:0,39,648	0/0:21,0:21:51.17:0,51,876	0/0:21,0:21:51.17:0,51,879	0/0:26,0:26:72.23:0,72,1220	0/0:18,0:18:51.15:0,51,853	0/0:17,0:17:39.13:0,39,675	0/1:1,15:16:6.83:514,0,7	0/0:21,0:21:48.16:0,48,832	0/0:20,0:20:51.17:0,51,883	0/0:23,0:23:66.21:0,66,1111	0/0:11,0:11:33.11:0,33,553	0/0:14,0:14:33.11:0,33,568	0/0:16,0:16:48.16:0,48,831	0/0:24,0:24:66.23:0,66,1143	0/0:17,0:17:48.16:0,48,807	0/0:34,0:34:99:0,99,1709	0/0:8,0:8:24.08:0,24,409
chr10	99814952	.	C	CT	6057.97	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.400;DP=661;FS=0.678;HRun=9;HaplotypeScore=88.0239;InbreedingCoeff=0.9809;MQ=77.71;MQ0=0;MQRankSum=-1.019;QD=25.35;ReadPosRankSum=-1.699;VQSLOD=4.3870;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:89.98:0,90,781	0/0:11,0:11:32.99:0,33,286	0/0:15,0:15:35.97:0,36,308	0/0:15,0:14:5.25:0,5,168	0/0:29,0:29:77.96:0,78,677	1/1:2,25:27:75.18:819,75,0	0/0:26,0:27:61.99:0,62,523	1/1:6,24:31:63.11:665,63,0	1/1:1,17:18:39.11:431,39,0	0/0:30,0:30:74.93:0,75,642	0/0:16,0:16:38.58:0,39,322	0/0:23,0:23:42.02:0,42,477	0/0:35,0:35:89.94:0,90,781	0/0:18,0:18:35.97:0,36,312	0/0:17,0:17:47.97:0,48,413	0/0:18,0:18:44.98:0,45,391	0/0:28,0:28:62.95:0,63,547	1/1:7,22:29:75.16:815,75,0	1/1:11,11:22:48.11:518,48,0	1/1:12,22:34:72.19:789,72,0	1/1:4,20:24:54.15:597,54,0	0/0:24,0:24:62.96:0,63,543	0/0:24,0:24:65.97:0,66,569	0/0:29,0:29:68.34:0,68,581	0/0:30,0:30:77.94:0,78,670	1/1:3,19:22:34.11:604,34,0	1/1:8,16:24:60.10:632,60,0	1/1:4,4:8:18.02:186,18,0
chr10	99815013	.	GA	G	4430.12	PASS	AB=0.955;AC=21;AF=0.375;AN=56;BaseQRankSum=12.508;DP=617;FS=8.586;HRun=11;HaplotypeScore=75.1652;InbreedingCoeff=0.9432;MQ=73.70;MQ0=3;MQRankSum=-4.116;QD=17.17;ReadPosRankSum=-0.223;VQSLOD=5.4169;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:97.66:0,98,1017	0/0:10,0:10:27.06:0,27,283	0/1:20,0:15:0.09:0,0,117	0/0:18,0:13:10.77:0,11,95	0/0:26,0:26:63.12:0,63,649	1/1:9,12:21:17.89:314,18,0	0/0:12,0:12:36.09:0,36,384	1/1:6,39:45:89.06:909,89,0	1/1:6,3:9:11.95:98,12,0	0/0:28,0:28:70.24:0,70,714	0/0:13,0:13:27.07:0,27,288	0/0:20,0:21:53.33:0,53,533	0/0:17,0:17:42.11:0,42,448	0/0:20,0:20:60.12:0,60,623	0/0:18,0:18:42.04:0,42,434	0/0:16,0:16:36.09:0,36,383	0/0:24,0:24:72.17:0,72,761	1/1:5,20:25:53.92:443,54,0	1/1:3,16:20:49.97:398,50,0	1/1:4,26:32:75.95:603,76,0	1/1:7,12:19:47.92:394,48,0	0/0:18,0:19:44.71:0,45,435	0/0:23,0:23:51.13:0,51,544	0/0:28,0:28:69.13:0,69,717	0/0:25,1:28:47.35:0,47,679	1/1:5,23:28:10.94:502,11,0	1/1:3,18:22:49.98:400,50,0	1/1:1,15:16:44.95:369,45,0
chr10	99815140	.	G	GTGTT	2683.24	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.005;DP=740;FS=2.829;HRun=0;HaplotypeScore=120.4783;InbreedingCoeff=0.9990;MQ=60.30;MQ0=7;MQRankSum=-4.833;QD=54.76;ReadPosRankSum=2.604;VQSLOD=5.2685;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:94.84:0,95,1715	0/0:10,0:10:30.09:0,30,537	0/0:35,0:22:29.09:0,29,722	0/0:41,0:23:53.86:0,54,861	0/0:32,0:32:93.29:0,93,1690	0/0:27,0:27:75.20:0,75,1263	0/0:28,0:28:76.62:0,77,1445	0/0:43,0:43:99:0,113,1839	1/1:1,23:24:63.22:1697,63,0	0/0:21,0:21:57.14:0,57,982	0/0:20,0:20:52.26:0,52,823	0/0:18,0:18:54.15:0,54,949	0/0:24,0:24:66.23:0,66,1241	0/0:15,0:15:39.13:0,39,739	0/0:25,0:25:72.25:0,72,1355	0/0:24,0:24:69.22:0,69,1236	0/0:34,0:34:76.24:0,76,1509	1/1:4,21:25:33.40:1108,33,0	0/0:20,0:20:54.15:0,54,925	0/0:34,0:34:96.28:0,96,1706	0/0:32,0:32:93.22:0,93,1543	0/0:27,0:27:81.22:0,81,1401	0/0:15,0:15:42.13:0,42,742	0/0:33,0:33:88.20:0,88,1604	0/0:18,0:18:54.18:0,54,989	0/0:30,0:30:87.26:0,87,1458	0/0:28,0:28:78.25:0,78,1425	0/0:15,0:15:30.10:0,30,543
chr10	99815625	.	TG	T	7270.17	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.725;DP=698;FS=4.624;HRun=2;HaplotypeScore=75.9339;InbreedingCoeff=1.0000;MQ=90.50;MQ0=0;MQRankSum=-1.258;QD=35.99;ReadPosRankSum=-1.694;VQSLOD=4.6909;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.26:0,78,1167	0/0:13,0:13:36.12:0,36,535	0/0:27,0:28:81.10:0,81,1159	0/0:28,0:28:65.91:0,66,999	0/0:27,0:27:81.25:0,81,1172	0/0:26,0:26:78.22:0,78,1144	0/0:22,0:22:63.21:0,63,943	1/1:2,27:29:78.24:998,78,0	0/0:22,0:22:66.22:0,66,989	0/0:25,0:25:72.24:0,72,1080	0/0:25,0:25:75.23:0,75,1085	0/0:16,0:16:48.16:0,48,720	0/0:24,0:24:72.24:0,72,1077	0/0:17,0:17:51.17:0,51,764	0/0:27,0:27:81.25:0,81,1175	0/0:25,0:25:75.25:0,75,1123	0/0:22,0:22:63.20:0,63,924	0/0:20,0:20:60.20:0,60,885	1/1:0,27:27:78.25:1011,78,0	1/1:2,20:22:54.18:701,54,0	1/1:0,32:32:93.30:1208,93,0	0/0:35,0:35:99:0,102,1503	0/0:24,0:24:72.23:0,72,1058	0/0:28,0:28:78.26:0,78,1168	0/0:16,0:16:45.14:0,45,657	1/1:1,30:31:48.29:1093,48,0	1/1:1,30:31:90.29:1168,90,0	1/1:2,28:30:84.27:1091,84,0
chr10	99815967	.	CT	C	5073.08	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=11.559;DP=608;FS=30.120;HRun=7;HaplotypeScore=75.7443;InbreedingCoeff=0.9826;MQ=79.63;MQ0=4;MQRankSum=-0.903;QD=24.51;ReadPosRankSum=0.565;VQSLOD=2.9962;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.22:0,72,891	0/0:12,0:12:33.09:0,33,401	0/0:58,1:37:53.35:0,53,763	0/0:44,0:28:41.39:0,41,378	0/0:27,0:27:78.23:0,78,951	1/1:0,16:16:45.10:457,45,0	0/0:17,0:17:39.11:0,39,477	1/1:7,28:34:75.06:721,75,0	1/1:1,11:12:27.06:274,27,0	0/0:23,0:23:66.20:0,66,809	0/0:16,0:16:45.14:0,45,564	0/0:12,0:12:33.10:0,33,404	0/0:23,0:23:63.17:0,63,754	0/0:16,0:16:42.13:0,42,517	0/0:11,0:11:30.10:0,30,377	0/0:12,0:12:33.07:0,33,387	0/0:26,0:26:66.16:0,66,800	1/1:2,23:25:50.88:599,51,0	1/1:0,23:23:66.03:628,66,0	1/1:0,18:18:51.07:508,51,0	1/1:1,17:18:48.11:490,48,0	0/0:27,0:27:72.22:0,72,894	0/0:17,0:17:45.13:0,45,550	0/0:22,0:22:60.17:0,60,728	0/0:11,0:11:30.10:0,30,377	1/1:5,26:31:5.60:663,6,0	1/1:1,15:16:42.10:428,42,0	1/1:0,13:13:30.07:306,30,0
chr10	99818303	.	ATG	A	878.33	PASS	AB=0.887;AC=16;AF=0.296;AN=54;BaseQRankSum=4.348;DP=637;FS=3.653;HRun=0;HaplotypeScore=98.0519;InbreedingCoeff=0.2149;MQ=71.73;MQ0=2;MQRankSum=-0.283;QD=3.47;ReadPosRankSum=0.811;VQSLOD=2.0228;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:32:2.59:35,3,0	0/0:6,0:6:9.03:0,9,135	./.	0/0:31,0:27:0:0,0,0	0/1:20,1:21:22.47:22,0,281	1/1:6,0:20:26.21:155,26,0	0/1:14,5:19:99:102,0,237	0/0:21,0:20:5.88:0,6,54	1/1:13,11:24:4.74:224,5,0	0/1:15,3:18:39.20:39,0,252	0/0:23,0:23:24.03:0,24,330	0/1:14,1:15:33.51:34,0,367	0/0:18,0:18:23.95:0,24,322	0/0:19,0:19:28.92:0,29,402	0/1:13,4:17:99:103,0,218	0/1:19,3:22:18.34:18,0,552	0/0:19,0:35:29.87:0,30,258	1/1:12,11:24:24.18:275,24,0	0/0:34,0:33:28.16:0,28,261	0/0:20,0:28:13.70:0,14,51	0/0:24,0:24:14.98:0,15,159	0/1:18,1:19:1.26:1,0,352	0/0:19,0:19:30.10:0,30,436	0/0:20,0:20:42.14:0,42,628	0/1:20,2:22:33.48:33,0,319	0/0:36,0:36:53.76:0,54,519	0/0:10,0:20:23.04:0,23,199	0/0:12,0:20:12.02:0,12,128
chr10	99822047	.	G	GT	2575.66	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.382;DP=596;FS=4.690;HRun=1;HaplotypeScore=63.1538;InbreedingCoeff=0.9945;MQ=64.02;MQ0=0;MQRankSum=-0.002;QD=39.03;ReadPosRankSum=3.703;VQSLOD=4.3897;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,1604	0/0:13,0:13:39.13:0,39,506	0/0:12,0:12:29.35:0,29,312	0/0:12,0:11:27.06:0,27,312	0/0:12,0:12:33.11:0,33,428	0/0:30,0:30:87.25:0,87,1100	0/0:29,0:29:87.22:0,87,1108	0/0:20,0:20:54.18:0,54,701	1/1:2,36:38:99:1574,105,0	0/0:21,0:21:63.18:0,63,799	0/0:7,0:7:18.06:0,18,234	0/0:17,0:17:51.15:0,51,648	0/0:13,0:13:39.13:0,39,506	0/0:19,0:19:57.19:0,57,739	0/0:24,0:24:72.21:0,72,906	0/0:12,0:12:36.12:0,36,467	0/0:38,0:38:99:0,108,1398	1/1:3,25:28:75.25:1124,75,0	0/0:21,0:21:63.19:0,63,803	0/0:16,0:16:36.07:0,36,448	0/0:33,0:33:99:0,99,1257	0/0:13,0:13:39.11:0,39,492	0/0:14,0:14:39.11:0,39,492	0/0:36,0:36:99:0,105,1327	0/0:15,0:15:45.11:0,45,554	0/0:12,0:12:33.10:0,33,407	0/0:19,0:19:57.17:0,57,722	0/0:29,0:29:87.28:0,87,1123
chr10	99822294	.	T	TAC	6119.51	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=-6.475;DP=403;FS=0.850;HRun=0;HaplotypeScore=51.9596;InbreedingCoeff=0.8028;MQ=72.10;MQ0=2;MQRankSum=-2.079;QD=33.62;ReadPosRankSum=1.738;VQSLOD=6.8701;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:33.08:0,33,423	0/0:3,0:3:9.02:0,9,109	0/1:7,0:6:12.11:12,0,60	0/0:14,0:10:21.12:0,21,129	0/0:33,0:33:96.22:0,96,1230	0/0:16,0:16:48.12:0,48,618	0/0:2,0:2:5.99:0,6,50	1/1:6,37:44:99:1558,108,0	0/0:16,0:16:45.12:0,45,592	0/0:21,0:21:57.13:0,57,681	0/0:20,0:20:60.16:0,60,786	0/0:8,0:8:24.04:0,24,298	0/0:3,0:3:9:0,9,105	0/0:7,0:7:21.04:0,21,259	0/0:11,0:11:33.07:0,33,409	0/0:8,0:8:24.07:0,24,318	0/1:20,0:20:0.74:1,0,597	0/0:19,0:18:48.02:0,48,592	1/1:2,10:11:27.09:477,27,0	1/1:0,22:22:51.17:874,51,0	1/1:1,9:10:24.08:431,24,0	0/0:4,0:4:9.03:0,9,126	0/0:7,0:7:20.99:0,21,205	0/0:2,0:2:6:0,6,65	0/0:16,0:16:45.13:0,45,594	1/1:1,21:22:18.23:884,18,0	1/1:1,21:21:48.16:860,48,0	1/1:0,23:23:57.20:1023,57,0
chr10	99822378	.	CAT	C	728.05	PASS	AB=0.905;AC=12;AF=0.214;AN=56;BaseQRankSum=10.857;DP=435;FS=4.104;HRun=0;HaplotypeScore=69.0545;InbreedingCoeff=0.2931;MQ=62.46;MQ0=1;MQRankSum=-6.600;QD=3.57;ReadPosRankSum=-1.658;VQSLOD=1.4943;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:44.38:0,44,664	0/0:11,0:11:33.11:0,33,603	0/1:6,0:6:25.92:26,0,120	0/0:9,0:8:8.97:0,9,82	0/0:21,0:21:63.16:0,63,1052	0/0:17,0:17:45.14:0,45,792	0/0:8,0:8:21.07:0,21,384	0/1:35,24:59:99:322,0,1018	0/1:15,0:15:16.84:17,0,21	0/0:22,0:22:63.18:0,63,1059	0/0:19,0:19:54.17:0,54,958	0/0:10,0:10:30.10:0,30,549	0/0:7,0:7:21.07:0,21,384	0/0:10,0:10:30.10:0,30,548	0/0:11,0:11:30.09:0,30,519	0/0:9,0:9:27.07:0,27,434	0/0:13,0:13:39.06:0,39,645	1/1:14,0:13:20.75:139,21,0	0/1:11,7:18:79.40:79,0,287	1/1:17,0:17:2.93:25,3,0	0/0:6,0:6:0:0,0,0	0/0:6,0:6:18.06:0,18,329	0/0:16,0:16:48.15:0,48,847	0/0:6,0:6:14.99:0,15,180	0/0:11,0:11:30.09:0,30,519	0/1:22,0:22:96.66:97,0,108	0/1:35,0:34:28.52:124,0,29	1/1:17,0:17:8.87:57,9,0
chr10	99822593	.	C	CAT	1217.61	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.301;DP=393;FS=7.377;HRun=0;HaplotypeScore=45.4573;InbreedingCoeff=0.9667;MQ=73.04;MQ0=0;MQRankSum=-1.443;QD=48.70;ReadPosRankSum=1.275;VQSLOD=4.4783;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.18:0,54,873	0/0:6,0:6:18.02:0,18,264	0/0:11,0:11:32.83:0,33,435	0/0:6,0:6:15.04:0,15,214	0/0:22,0:22:66.23:0,66,1071	0/0:22,0:22:66.21:0,66,1050	0/0:7,0:7:21.07:0,21,342	0/0:15,0:15:45.10:0,45,656	1/1:0,14:14:36.12:730,36,0	0/0:33,0:33:99:0,99,1580	0/0:23,0:23:69.19:0,69,1065	0/0:14,0:14:42.14:0,42,685	0/0:16,0:16:48.16:0,48,782	0/0:14,0:14:42.14:0,42,684	0/0:13,0:13:36.11:0,36,562	0/0:17,0:17:51.13:0,51,793	0/0:17,0:17:51.15:0,51,792	1/1:0,10:11:30.10:609,30,0	0/0:18,0:18:54.18:0,54,870	0/0:13,0:13:39.13:0,39,635	0/0:7,0:7:21.07:0,21,341	0/0:5,0:5:15.05:0,15,244	0/0:10,0:10:30.10:0,30,489	0/0:9,0:9:27.09:0,27,440	0/0:15,0:15:45.15:0,45,734	0/0:15,0:15:42.13:0,42,659	0/0:15,0:15:42.14:0,42,677	0/0:5,0:5:15.05:0,15,244
chr10	99822696	.	T	TTAA	4942.95	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-6.214;DP=421;FS=78.898;HRun=0;HaplotypeScore=65.2837;InbreedingCoeff=0.9325;MQ=84.53;MQ0=0;MQRankSum=-1.632;QD=52.03;ReadPosRankSum=0.339;VQSLOD=1.5178;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:0.75:0,1,174	0/0:11,0:11:33.06:0,33,497	0/0:21,0:19:33.65:0,34,362	0/0:15,0:15:14.19:0,14,237	0/0:29,0:29:87.30:0,87,1498	0/0:24,0:24:20.87:0,21,293	0/0:9,0:9:27.06:0,27,399	1/1:3,6:11:27.01:391,27,0	1/1:0,15:16:33.11:770,33,0	0/0:25,0:25:75.23:0,75,1217	0/0:23,0:23:66.15:0,66,1048	0/0:5,0:5:12.02:0,12,183	0/0:19,0:19:57.19:0,57,941	0/0:12,0:12:33.06:0,33,492	0/0:23,0:23:66.12:0,66,973	0/0:14,0:14:39.09:0,39,604	0/0:22,0:22:66.22:0,66,1075	1/1:0,18:18:36.06:763,36,0	1/1:0,11:11:33:620,33,0	1/1:0,8:9:24.08:510,24,0	1/1:1,5:6:18.06:393,18,0	0/0:5,0:5:15.04:0,15,235	0/0:17,0:17:51.17:0,51,871	0/0:15,0:15:45.15:0,45,766	0/0:20,0:20:60.21:0,60,1049	1/1:0,6:6:18.06:430,18,0	1/1:2,12:15:39.13:922,39,0	1/1:0,2:2:6.02:143,6,0
chr10	99823229	.	GA	G	6309.80	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.285;DP=601;FS=2.920;HRun=1;HaplotypeScore=58.5069;InbreedingCoeff=0.9994;MQ=80.02;MQ0=0;MQRankSum=-1.976;QD=40.97;ReadPosRankSum=0.970;VQSLOD=5.4409;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,166,2607	0/0:10,0:10:30.09:0,30,457	0/0:14,0:14:42.12:0,42,641	0/0:15,0:15:39.11:0,39,585	0/0:21,0:21:63.21:0,63,1005	0/0:26,0:26:78.23:0,78,1199	0/0:23,0:23:66.21:0,66,1029	1/1:0,30:30:90.28:1240,90,0	0/0:17,0:17:51.17:0,51,815	0/0:16,0:16:48.16:0,48,761	0/0:16,0:16:48.16:0,48,755	0/0:15,0:15:45.15:0,45,715	0/0:22,0:22:66.21:0,66,1032	0/0:15,0:15:45.14:0,45,697	0/0:22,0:22:66.23:0,66,1052	0/0:21,0:21:63.20:0,63,982	0/0:42,0:42:99:0,123,1935	0/0:25,0:25:75.21:0,75,1148	1/1:0,15:15:45.15:629,45,0	1/1:0,19:19:57.19:797,57,0	1/1:0,30:30:90.30:1259,90,0	0/0:27,0:27:78.27:0,78,1244	0/0:9,0:9:24.55:0,25,385	0/0:25,0:24:75.23:0,75,1173	0/0:11,0:11:33.11:0,33,528	1/1:1,29:30:42.32:1168,42,0	1/1:0,19:19:54.18:755,54,0	1/1:0,11:11:33.11:462,33,0
chr10	99824286	.	T	TAGC	3214.31	PASS	AB=0.571;AC=21;AF=0.375;AN=56;BaseQRankSum=-5.526;DP=479;FS=4.394;HRun=0;HaplotypeScore=80.9631;InbreedingCoeff=0.8297;MQ=71.89;MQ0=3;MQRankSum=-0.359;QD=18.26;ReadPosRankSum=-3.492;VQSLOD=2.4535;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:2.94:18,3,0	0/0:6,0:6:18.05:0,18,242	0/0:23,0:15:27.03:0,27,272	0/0:22,0:20:35.99:0,36,378	0/0:24,0:24:45.11:0,45,598	1/1:7,0:7:5.88:36,6,0	0/0:18,0:18:45.07:0,45,529	1/1:25,0:25:51.04:555,51,0	1/1:4,0:4:8.83:54,9,0	0/0:15,0:15:24.06:0,24,303	0/0:8,0:8:0:0,0,0	0/0:14,0:14:27.08:0,27,372	0/0:19,0:19:51.07:0,51,598	0/0:19,0:19:45.09:0,45,577	0/0:25,0:25:66.16:0,66,852	0/0:13,0:13:39.10:0,39,514	0/0:32,0:32:72.10:0,72,889	1/1:7,0:7:6.85:51,7,0	1/1:10,15:25:47.97:548,48,0	1/1:14,0:14:23.78:180,24,0	1/1:12,22:34:27.09:555,27,0	0/0:13,0:13:21.05:0,21,270	0/0:13,0:13:15.05:0,15,217	0/0:29,0:29:66.14:0,66,829	0/0:10,0:10:18.06:0,18,262	1/1:6,9:15:26.53:399,27,0	1/1:5,23:29:47.95:973,48,0	0/1:2,3:8:52.69:53,0,53
chr10	99824382	.	T	TA	368.59	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.314;DP=511;FS=15.841;HRun=3;HaplotypeScore=52.2915;InbreedingCoeff=0.9362;MQ=77.40;MQ0=0;MQRankSum=-4.594;QD=13.65;ReadPosRankSum=0.471;VQSLOD=1.3249;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,4:7:12.04:166,12,0	0/0:6,0:6:18.06:0,18,216	0/0:13,0:13:36.10:0,36,415	0/0:25,0:24:61.98:0,62,700	0/0:28,0:28:78.22:0,78,923	1/1:5,2:7:8.94:100,9,0	0/0:11,0:11:33.10:0,33,396	0/0:27,0:27:78.22:0,78,916	1/1:5,1:6:14.91:162,15,0	0/0:27,0:27:78.23:0,78,928	0/0:25,0:25:69.20:0,69,815	0/0:14,0:14:42.08:0,42,477	0/0:19,0:19:51.14:0,51,600	0/0:17,0:17:48.15:0,48,575	0/0:20,0:20:60.18:0,60,719	0/0:17,0:17:48.10:0,48,549	0/0:23,0:23:66.17:0,66,767	1/1:5,2:7:6.02:84,6,0	0/0:27,0:27:78.20:0,78,896	0/0:17,0:17:48.15:0,48,576	0/0:15,0:15:45.14:0,45,540	0/0:15,0:15:39.12:0,39,468	0/0:26,0:26:78.22:0,78,923	0/0:25,0:25:63.19:0,63,756	0/0:19,0:19:54.16:0,54,648	0/0:23,0:23:69.21:0,69,828	0/0:29,0:29:84.24:0,84,995	0/0:16,0:16:39.12:0,39,468
chr10	99824392	.	TC	T	464.18	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.512;DP=518;FS=13.992;HRun=1;HaplotypeScore=53.4816;InbreedingCoeff=0.9506;MQ=80.46;MQ0=0;MQRankSum=-2.637;QD=16.58;ReadPosRankSum=-0.273;VQSLOD=2.2252;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,3:8:12.03:149,12,0	0/0:5,0:5:15.05:0,15,235	0/0:21,0:21:63.18:0,63,879	0/0:22,0:22:65.79:0,66,925	0/0:25,0:25:75.24:0,75,1150	1/1:3,2:5:9.03:125,9,0	0/0:11,0:11:30.09:0,30,447	0/0:23,0:23:66.22:0,66,1011	1/1:5,2:7:18.04:233,18,0	0/0:28,0:28:81.27:0,81,1268	0/0:25,0:25:75.26:0,75,1172	0/0:14,0:14:42.13:0,42,635	0/0:18,0:18:54.18:0,54,839	0/0:16,0:16:48.15:0,48,728	0/0:24,0:24:72.23:0,72,1104	0/0:19,0:19:54.16:0,54,798	0/0:24,0:24:72.22:0,72,1096	1/1:5,3:8:8.99:103,9,0	0/0:27,0:27:81.26:0,81,1217	0/0:19,0:19:57.19:0,57,890	0/0:16,0:16:48.14:0,48,726	0/0:14,0:14:42.14:0,42,651	0/0:28,0:28:81.26:0,81,1244	0/0:23,0:23:69.23:0,69,1078	0/0:23,0:23:69.22:0,69,1055	0/0:23,0:23:66.20:0,66,992	0/0:29,0:28:87.25:0,87,1293	0/0:13,0:13:39.13:0,39,610
chr10	99824443	.	AT	A	1880.78	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.364;DP=548;FS=49.396;HRun=1;HaplotypeScore=62.5892;InbreedingCoeff=0.9952;MQ=72.68;MQ0=0;MQRankSum=-3.952;QD=30.83;ReadPosRankSum=0.731;VQSLOD=0.3035;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:30:72.18:914,72,0	0/0:11,0:11:33.11:0,33,527	0/0:23,0:21:63.20:0,63,971	0/0:21,0:20:52.47:0,52,805	0/0:22,0:22:66.22:0,66,1045	1/1:0,13:13:36.12:467,36,0	0/0:17,0:17:51.17:0,51,815	0/0:29,0:29:87.28:0,87,1348	1/1:0,12:12:36.12:467,36,0	0/0:23,0:23:69.24:0,69,1096	0/0:24,0:24:72.16:0,72,1097	0/0:15,0:15:45.15:0,45,713	0/0:13,0:13:39.10:0,39,596	0/0:17,0:17:51.17:0,51,815	0/0:24,0:24:72.25:0,72,1150	0/0:13,0:13:39.13:0,39,623	0/0:29,0:29:87.30:0,87,1385	1/1:0,6:6:15.05:193,15,0	0/0:28,0:28:84.26:0,84,1291	0/0:17,0:17:51.17:0,51,811	0/0:27,0:27:78.27:0,78,1245	0/0:16,0:16:48.16:0,48,759	0/0:25,0:25:75.21:0,75,1146	0/0:24,0:24:66.19:0,66,1005	0/0:22,0:22:66.23:0,66,1053	0/0:18,0:18:54.18:0,54,863	0/0:19,0:18:57.19:0,57,911	0/0:10,0:10:30.09:0,30,455
chr10	99824537	.	A	ATGAG	558.22	PASS	AB=0.931;AC=4;AF=0.071;AN=56;BaseQRankSum=3.591;DP=511;FS=2.304;HRun=0;HaplotypeScore=114.0766;InbreedingCoeff=0.4289;MQ=62.60;MQ0=22;MQRankSum=-0.276;QD=10.15;ReadPosRankSum=-3.067;VQSLOD=2.4323;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,4:23:99:469,0,110	0/0:7,0:7:21.07:0,21,415	0/1:25,0:7:8.80:9,0,139	0/0:33,0:18:29.95:0,30,690	0/0:22,0:22:57.18:0,57,1059	0/0:14,1:15:29.61:0,30,281	0/0:24,0:24:55.53:0,56,1395	0/0:24,0:23:68.96:0,69,1221	1/1:4,1:5:9.02:184,9,0	0/0:17,0:17:51.17:0,51,1019	0/0:15,0:15:39.13:0,39,789	0/0:13,0:12:30.10:0,30,597	0/0:17,0:17:48.16:0,48,975	0/0:9,0:9:21.07:0,21,419	0/0:14,0:13:36.12:0,36,711	0/0:15,0:15:39.13:0,39,775	0/0:26,0:25:60.21:0,60,1213	0/0:13,0:13:23.41:0,23,262	0/0:21,0:21:60.20:0,60,994	0/0:17,0:16:39.10:0,39,644	0/0:24,0:21:37.89:0,38,543	0/0:15,0:14:39.13:0,39,815	0/0:15,0:15:42.14:0,42,827	0/0:31,0:31:81.27:0,81,1584	0/0:20,0:20:60.19:0,60,1196	0/0:20,0:19:51.17:0,51,838	0/0:17,0:18:51.16:0,51,736	0/0:11,0:10:24.08:0,24,323
chr10	99825503	.	G	GT	697.91	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.130;DP=571;FS=7.144;HRun=6;HaplotypeScore=55.6804;InbreedingCoeff=0.8468;MQ=64.35;MQ0=1;MQRankSum=0.801;QD=31.72;ReadPosRankSum=1.851;VQSLOD=4.1034;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,108,1092	0/0:7,0:7:18.04:0,18,184	0/0:11,0:8:3.30:0,3,150	0/0:23,0:19:47.83:0,48,463	0/0:35,0:35:93.20:0,93,947	1/1:1,21:22:63.20:793,63,0	0/0:25,0:25:69.14:0,69,697	0/0:21,0:21:30.80:0,31,387	0/0:14,0:14:39.09:0,39,398	0/0:24,0:24:69.16:0,69,704	0/0:21,0:21:60.12:0,60,604	0/0:18,0:18:45.10:0,45,459	0/0:16,0:16:36.08:0,36,367	0/0:20,0:20:60.11:0,60,604	0/0:20,0:20:57.11:0,57,575	0/0:15,0:15:36.08:0,36,367	0/0:21,0:21:54.07:0,54,539	0/0:22,0:21:63.14:0,63,642	0/0:17,0:16:33.06:0,33,330	0/0:26,0:26:72.16:0,72,734	0/0:20,0:20:57.13:0,57,581	0/0:17,0:17:39.08:0,39,397	0/0:31,0:31:90.19:0,90,911	0/0:17,0:17:51.08:0,51,509	0/0:16,0:16:48.11:0,48,490	0/0:22,0:22:57.13:0,57,582	0/0:21,0:20:57.11:0,57,573	0/0:8,0:8:21.05:0,21,214
chr10	99826344	.	T	TAA	2068.31	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-0.220;DP=644;FS=3.314;HRun=10;HaplotypeScore=82.1301;InbreedingCoeff=0.9471;MQ=71.93;MQ0=0;MQRankSum=-0.753;QD=20.08;ReadPosRankSum=1.046;VQSLOD=2.9301;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:40:72.36:255,72,0	0/0:10,0:10:20.98:0,21,207	0/0:14,0:15:2.86:0,3,169	0/0:17,0:17:15.85:0,16,195	0/0:26,0:26:45.98:0,46,479	1/1:2,17:20:50.95:679,51,0	0/0:26,0:26:66.07:0,66,649	0/0:25,0:27:32.70:0,33,387	1/1:3,21:24:51.17:756,51,0	0/0:24,0:24:58.89:0,59,584	0/0:13,0:13:33.06:0,33,336	0/0:18,0:18:48.08:0,48,481	0/0:18,0:18:42.05:0,42,419	0/0:18,0:18:48.10:0,48,488	0/0:24,0:25:62.32:0,62,610	0/0:24,0:24:66.09:0,66,644	0/0:28,0:29:77.59:0,78,760	1/1:3,15:19:37.01:539,37,0	0/0:22,0:22:45:0,45,446	0/0:32,0:32:84.12:0,84,854	0/0:36,0:36:87.16:0,87,884	0/0:29,0:29:72.05:0,72,706	0/0:24,0:24:69.14:0,69,693	0/0:17,0:18:41.82:0,42,409	0/0:19,0:19:51.11:0,51,518	0/0:28,0:28:78.15:0,78,790	0/0:26,0:26:69.14:0,69,701	0/0:15,0:16:29.77:0,30,357
chr10	99828250	.	A	AT	2758.04	PASS	AB=0.780;AC=14;AF=0.250;AN=56;BaseQRankSum=-9.368;DP=394;FS=1.482;HRun=10;HaplotypeScore=57.2481;InbreedingCoeff=0.7470;MQ=82.45;MQ0=0;MQRankSum=-1.156;QD=19.84;ReadPosRankSum=-1.478;VQSLOD=4.0532;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:41.02:0,41,100	0/0:1,0:1:3:0,3,25	0/0:12,0:12:27.70:0,28,172	0/0:13,0:14:10.66:0,11,144	0/0:9,0:9:26.97:0,27,222	0/0:13,0:13:12.77:0,13,30	0/1:11,1:12:8.04:8,0,145	1/1:6,17:23:47.97:460,48,0	0/0:15,0:15:17.75:0,18,43	0/0:9,0:9:20.96:0,21,170	0/0:6,0:6:14.98:0,15,123	0/0:8,0:8:23.97:0,24,197	0/0:10,0:10:29.96:0,30,246	0/0:20,0:20:53.25:0,53,439	0/0:15,0:15:41.94:0,42,342	0/0:13,0:13:32.96:0,33,271	0/0:21,0:21:53.91:0,54,441	0/0:17,0:17:18.69:0,19,47	0/1:5,8:14:13.82:189,0,14	1/1:0,4:4:12.03:128,12,0	1/1:6,16:22:42.11:448,42,0	0/0:2,0:2:5.99:0,6,49	0/0:4,0:4:8.97:0,9,71	0/0:17,0:19:26.29:0,26,308	0/0:10,0:10:23.97:0,24,197	1/1:4,14:18:42.08:433,42,0	1/1:1,18:19:48.12:512,48,0	1/1:0,27:27:72.18:767,72,0
chr10	99828260	.	TC	T	2581.55	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.399;DP=383;FS=0.000;HRun=2;HaplotypeScore=54.5537;InbreedingCoeff=0.9060;MQ=86.84;MQ0=0;MQRankSum=-3.078;QD=34.42;ReadPosRankSum=3.374;VQSLOD=3.6838;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:96.31:1231,96,0	0/0:1,0:1:3.01:0,3,41	0/0:20,0:20:11.77:0,12,511	0/0:11,1:12:34.19:0,34,291	0/0:11,0:11:30.03:0,30,385	1/1:0,11:11:30.10:388,30,0	0/0:12,0:12:36.06:0,36,415	0/0:20,0:20:47.86:0,48,404	1/1:0,15:15:42.14:542,42,0	0/0:7,0:7:18.06:0,18,246	0/0:7,0:7:18.05:0,18,231	0/0:9,0:9:27.08:0,27,352	0/0:10,0:10:30.10:0,30,409	0/0:18,0:20:46.13:0,46,685	0/0:15,0:15:45.14:0,45,599	0/0:11,0:11:33.11:0,33,447	0/0:19,0:19:57.18:0,57,761	1/1:0,15:15:45.15:580,45,0	0/0:16,0:16:28.35:0,28,352	0/0:5,0:5:14.92:0,15,111	0/0:17,0:17:47.84:0,48,371	0/0:3,0:3:9.02:0,9,107	0/0:3,0:3:9.03:0,9,119	0/0:17,0:17:39.01:0,39,524	0/0:9,0:9:27.08:0,27,352	0/0:17,0:17:50.05:0,50,380	0/0:20,0:20:53.49:0,53,408	0/0:27,0:27:71.73:0,72,547
chr10	99828448	.	AATAT	A	2306.32	PASS	AB=1.000;AC=11;AF=0.239;AN=46;BaseQRankSum=4.120;DP=165;FS=0.000;HRun=0;HaplotypeScore=38.5939;InbreedingCoeff=0.5590;MQ=75.48;MQ0=1;MQRankSum=-4.677;QD=29.95;ReadPosRankSum=0.628;VQSLOD=2.5905;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:5.93:0,6,41	0/0:4,0:4:9.03:0,9,217	0/0:8,0:6:8.88:0,9,59	0/1:10,0:6:11.52:12,0,54	0/0:4,0:4:6.02:0,6,152	0/0:2,0:3:5.98:0,6,67	./.	1/1:7,22:28:63.20:1056,63,0	0/0:1,0:3:6.02:0,6,106	0/0:7,0:7:18.06:0,18,413	0/0:3,0:3:3.01:0,3,75	0/0:2,0:2:3.01:0,3,76	0/0:2,0:2:6.02:0,6,146	0/0:5,0:6:8.82:0,9,164	0/0:8,0:8:21.07:0,21,523	0/0:2,0:2:3.01:0,3,46	0/0:10,0:10:24.07:0,24,555	0/0:5,0:7:12.04:0,12,228	1/1:6,12:18:45.12:720,45,0	1/1:0,2:2:6.02:104,6,0	./.	./.	0/0:2,0:2:3.01:0,3,76	./.	0/0:2,0:4:5.81:0,6,89	1/1:2,5:7:9.03:155,9,0	1/1:4,7:11:24.08:410,24,0	./.
chr10	99828480	.	TTC	T	2124.47	PASS	AC=14;AF=0.269;AN=52;BaseQRankSum=6.031;DP=163;FS=20.374;HRun=0;HaplotypeScore=35.6376;InbreedingCoeff=0.8116;MQ=81.94;MQ0=0;MQRankSum=-4.805;QD=28.71;ReadPosRankSum=-0.280;VQSLOD=2.3790;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:9.01:0,9,85	0/0:3,0:3:9.03:0,9,159	0/0:7,0:7:14.31:0,14,110	0/0:7,0:8:18.04:0,18,272	0/0:4,0:3:9.01:0,9,130	0/0:4,0:4:9.02:0,9,92	0/0:1,0:1:3.01:0,3,53	1/1:12,13:25:59.91:678,60,0	./.	0/0:5,0:5:12.04:0,12,213	0/0:4,0:4:12.04:0,12,212	0/0:2,0:2:6.02:0,6,106	0/0:4,0:4:12.04:0,12,213	0/0:4,0:4:12.04:0,12,213	0/0:6,0:6:18.05:0,18,291	0/0:2,0:2:6.02:0,6,106	0/0:9,0:9:21.07:0,21,372	0/0:4,0:4:9.01:0,9,88	1/1:6,13:19:48.09:592,48,0	1/1:0,6:6:18.06:247,18,0	1/1:0,3:3:9.03:123,9,0	./.	0/0:5,0:5:15.04:0,15,229	0/0:3,0:3:6.02:0,6,106	0/0:8,0:8:15.05:0,15,266	1/1:2,4:6:12.04:165,12,0	1/1:1,7:8:21.02:265,21,0	1/1:3,4:7:21.02:238,21,0
chr10	99836078	.	GAA	G	1768.62	PASS	AB=0.552;AC=13;AF=0.232;AN=56;BaseQRankSum=3.106;DP=533;FS=27.351;HRun=14;HaplotypeScore=69.0581;InbreedingCoeff=0.8534;MQ=53.63;MQ0=11;MQRankSum=0.211;QD=14.04;ReadPosRankSum=0.959;VQSLOD=0.5048;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:44:38.50:0,38,350	0/0:12,1:13:11.98:0,12,296	0/0:15,0:2:5.19:0,5,27	0/0:20,0:6:11.30:0,11,93	0/0:27,0:31:56.03:0,56,616	0/0:9,0:21:29.54:0,30,278	0/0:12,0:13:35.60:0,36,454	1/1:7,18:25:55.54:482,56,0	0/0:13,0:15:29.04:0,29,254	0/0:28,0:29:69.02:0,69,781	0/0:20,0:21:48.01:0,48,570	0/0:7,0:7:9.02:0,9,111	0/0:13,0:12:24:0,24,259	0/0:10,0:10:18.06:0,18,241	0/0:18,0:19:35.06:0,35,408	0/0:12,0:13:29.58:0,30,371	0/0:25,0:27:66.40:0,66,799	0/0:18,0:17:23.49:0,23,242	1/1:9,9:17:20.01:215,20,0	1/1:5,11:16:29.93:268,30,0	1/1:1,10:11:21.02:194,21,0	0/0:15,0:14:24.05:0,24,291	0/0:17,0:22:53.43:0,53,651	0/0:20,0:21:49.97:0,50,573	0/0:16,0:18:38.57:0,39,468	0/1:3,12:16:12.20:265,0,12	1/1:9,13:21:27.01:250,27,0	1/1:9,7:15:14.51:283,15,0
chr10	99836570	.	A	AT	1033.96	PASS	AB=0.625;AC=7;AF=0.130;AN=54;BaseQRankSum=8.782;DP=368;FS=2.544;HRun=0;HaplotypeScore=68.4810;InbreedingCoeff=0.6969;MQ=56.55;MQ0=14;MQRankSum=-1.896;QD=13.26;ReadPosRankSum=1.482;VQSLOD=4.7077;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:10,14:23:3.39:285,3,0	0/0:4,0:4:6.02:0,6,84	./.	0/0:12,0:4:8.96:0,9,68	0/0:22,0:22:59.91:0,60,762	1/1:7,16:22:37.78:390,38,0	0/0:6,0:6:18.02:0,18,229	0/0:33,0:31:89.30:0,89,653	0/1:2,3:5:11.98:69,0,12	0/0:9,0:7:21.06:0,21,279	0/0:8,0:8:15.01:0,15,187	0/0:6,0:6:15.04:0,15,192	0/0:8,0:7:18.02:0,18,215	0/0:6,0:5:15.04:0,15,192	0/0:16,0:15:33.10:0,33,444	0/0:12,0:12:36.10:0,36,471	0/0:22,0:21:51.73:0,52,711	1/1:12,14:25:22.43:428,22,0	0/0:20,0:18:50.30:0,50,386	0/0:12,0:12:35.56:0,36,242	0/0:6,0:5:8.89:0,9,60	0/0:5,0:5:12:0,12,146	0/0:10,0:10:30.02:0,30,379	0/0:6,0:5:12.04:0,12,167	0/0:20,0:20:48.28:0,48,658	0/0:19,0:17:40.61:0,41,265	0/0:15,0:15:41.68:0,42,298	0/0:12,0:11:29.72:0,30,206
chr10	99836572	.	A	AT	59.20	PASS	AB=0.633;AC=4;AF=0.074;AN=54;BaseQRankSum=8.899;DP=365;FS=2.464;HRun=0;HaplotypeScore=72.3595;InbreedingCoeff=-0.0958;MQ=57.04;MQ0=13;MQRankSum=1.765;QD=0.76;ReadPosRankSum=2.919;VQSLOD=0.9525;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,14:23:50.96:51,0,100	0/0:3,0:3:6.02:0,6,84	./.	0/0:12,0:4:8.59:0,9,71	0/0:21,0:21:60.11:0,60,766	0/1:7,16:22:40.05:45,0,40	0/0:6,0:6:15.05:0,15,209	0/0:32,0:30:86.61:0,87,678	0/1:2,3:5:20.93:21,0,62	0/0:9,0:8:24.06:0,24,304	0/0:8,0:8:18:0,18,212	0/0:5,0:5:12.04:0,12,167	0/0:8,0:7:21.01:0,21,240	0/0:5,0:4:12.04:0,12,167	0/0:17,0:16:36.10:0,36,470	0/0:11,0:11:33.10:0,33,445	0/0:22,0:21:48.74:0,49,688	0/1:14,12:25:50.75:51,0,92	0/0:19,0:17:47.31:0,47,359	0/0:12,0:12:35.70:0,36,258	0/0:7,0:6:8.95:0,9,67	0/0:5,0:5:12:0,12,146	0/0:10,0:10:30.08:0,30,388	0/0:6,0:5:12.04:0,12,167	0/0:21,0:21:51.19:0,51,679	0/0:19,0:17:43.79:0,44,307	0/0:15,0:15:38.82:0,39,293	0/0:13,0:12:29.84:0,30,222
chr10	99836574	.	A	AAT	6298.20	PASS	AB=0.813;AC=22;AF=0.393;AN=56;BaseQRankSum=-2.116;DP=373;FS=1.936;HRun=0;HaplotypeScore=54.0974;InbreedingCoeff=0.8220;MQ=60.36;MQ0=12;MQRankSum=-0.611;QD=31.49;ReadPosRankSum=0.104;VQSLOD=6.3698;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:24:27.57:471,28,0	0/0:3,0:3:6.02:0,6,85	0/1:2,0:1:0:0,0,0	0/0:14,0:6:8.94:0,9,73	0/0:21,0:21:60.13:0,60,783	1/1:6,0:21:47.23:666,47,0	0/0:6,0:6:18.05:0,18,240	1/1:5,33:36:90.19:1338,90,0	0/1:2,0:5:16.26:107,0,16	0/0:9,0:8:24.07:0,24,313	0/0:8,0:8:17.99:0,18,216	0/0:5,0:5:12.04:0,12,161	0/0:8,0:7:21.02:0,21,245	0/0:5,0:4:12.04:0,12,171	0/0:16,0:15:36.10:0,36,471	0/0:11,0:11:33.10:0,33,454	0/0:22,0:21:42.39:0,42,685	1/1:11,0:24:32.97:693,33,0	1/1:3,15:16:2.60:562,3,0	1/1:1,11:12:33.04:536,33,0	1/1:0,6:6:9.03:155,9,0	0/0:5,0:5:11.99:0,12,147	0/0:11,0:11:27.08:0,27,357	0/0:8,0:7:12.04:0,12,171	0/0:21,0:21:59.64:0,60,717	1/1:1,17:17:26.04:656,26,0	1/1:2,13:15:36.10:595,36,0	1/1:1,12:12:30.10:518,30,0
chr10	99837273	.	CT	C	766.59	PASS	AB=0.737;AC=17;AF=0.304;AN=56;BaseQRankSum=-2.041;DP=508;FS=1.052;HRun=16;HaplotypeScore=68.7330;InbreedingCoeff=0.3218;MQ=73.53;MQ0=4;MQRankSum=1.302;QD=3.81;ReadPosRankSum=5.142;VQSLOD=0.3397;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:17:8.52:0,9,43	1/1:0,3:3:8.83:54,9,0	0/0:41,0:18:16.58:0,17,98	0/1:26,2:15:12.05:12,0,17	1/1:8,18:27:34.75:285,35,0	0/0:9,0:22:16.47:0,16,118	0/1:5,6:12:2.59:91,0,3	0/0:17,0:25:31.97:0,32,189	0/0:18,0:19:30.20:0,30,160	0/0:19,2:21:16.01:0,16,210	0/0:24,0:26:44.12:0,44,342	1/1:4,8:12:8.74:54,9,0	0/1:7,2:11:9.18:43,0,9	0/1:8,1:10:6.02:31,0,6	0/1:16,3:19:22.93:63,0,23	0/1:5,9:14:9.87:26,0,10	1/1:11,6:17:6.56:132,7,0	0/0:10,0:12:22.72:0,23,113	0/0:17,0:19:32.03:0,32,208	0/0:6,1:25:28.04:0,28,229	0/0:5,0:12:14.11:0,14,69	0/1:6,10:16:11.78:40,0,12	0/1:8,8:20:2.18:74,0,2	0/1:8,2:11:9.42:37,0,9	0/0:12,0:12:26.90:0,27,216	0/0:19,0:28:45.68:0,46,304	0/0:7,0:17:17.34:0,17,103	0/0:4,0:8:15.67:0,16,82
chr10	99839769	.	C	CTT	1560.66	PASS	AB=0.577;AC=18;AF=0.321;AN=56;BaseQRankSum=13.237;DP=634;FS=0.336;HRun=10;HaplotypeScore=91.9495;InbreedingCoeff=0.6620;MQ=74.30;MQ0=0;MQRankSum=-3.230;QD=5.57;ReadPosRankSum=-0.890;VQSLOD=-0.4736;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:39:9.18:201,0,9	0/0:13,0:13:27.03:0,27,275	0/0:20,0:20:25.62:0,26,319	0/0:10,0:11:4.11:0,4,187	0/0:36,0:38:99:0,108,1054	1/1:9,3:27:42:425,42,0	0/0:16,0:16:30.47:0,30,385	1/1:9,0:34:53.83:222,54,0	0/1:3,0:18:5.59:51,0,6	0/0:21,0:21:54.09:0,54,549	0/0:20,0:20:48.08:0,48,488	0/0:25,0:26:56.80:0,57,561	0/0:25,0:25:43.37:0,43,590	0/0:14,0:15:38.81:0,39,378	0/0:18,0:21:47.53:0,48,437	0/0:29,0:30:71.87:0,72,778	0/0:23,0:23:60.10:0,60,610	1/1:3,0:18:32.44:114,32,0	0/1:10,0:26:86.27:93,0,86	0/1:6,0:20:18.78:97,0,19	1/1:6,0:29:6.67:85,7,0	0/0:25,0:25:66.11:0,66,671	0/0:18,0:19:50.82:0,51,500	0/0:11,0:14:32.28:0,32,350	0/0:17,0:17:45.09:0,45,458	1/1:6,1:24:42.94:185,43,0	1/1:5,1:26:12.93:146,13,0	1/1:2,0:19:39.93:140,40,0
chr10	99839840	.	CGTGTGTGT	C	2639.46	PASS	AB=0.802;AC=13;AF=0.241;AN=54;BaseQRankSum=5.619;DP=568;FS=6.931;HRun=0;HaplotypeScore=148.6403;InbreedingCoeff=0.6664;MQ=53.86;MQ0=7;MQRankSum=-7.625;QD=19.70;ReadPosRankSum=0.238;VQSLOD=2.6991;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:48.16:0,48,1852	0/0:13,0:13:24.08:0,24,899	./.	0/0:20,0:11:12.04:0,12,260	0/0:27,0:30:45.14:0,45,1549	0/0:15,0:19:24.08:0,24,755	0/0:16,0:17:36.12:0,36,1377	1/1:19,0:20:5.75:69,6,0	0/1:8,0:12:7.70:8,0,119	0/0:28,0:28:63.21:0,63,2175	0/0:14,0:14:18.06:0,18,737	0/0:16,0:18:33.11:0,33,1262	0/0:6,0:20:36.12:0,36,1189	0/0:31,0:33:66.21:0,66,2362	0/0:22,0:23:60.21:0,60,2306	0/0:20,0:22:42.13:0,42,1455	0/0:28,0:30:66.21:0,66,2532	0/0:11,0:18:13.73:0,14,271	0/1:7,3:11:32.37:212,0,32	1/1:14,6:19:18.06:453,18,0	0/1:11,1:12:99:106,0,129	0/0:25,0:28:48.12:0,48,1587	0/0:12,0:11:21.07:0,21,668	0/0:24,0:28:75.24:0,75,2783	0/0:20,0:21:24.08:0,24,859	1/1:14,5:20:21.07:471,21,0	1/1:10,14:25:48.16:1157,48,0	1/1:10,4:14:16.14:339,16,0
chr10	99840160	.	AACACACACACACACACACAC	A	1118.23	PASS	AB=0.625;AC=2;AF=0.036;AN=56;BaseQRankSum=6.345;DP=540;FS=2.680;HRun=0;HaplotypeScore=261.4091;InbreedingCoeff=-0.0525;MQ=66.90;MQ0=7;MQRankSum=-5.364;QD=18.95;ReadPosRankSum=-2.212;VQSLOD=2.3714;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,20:33:38.59:971,0,39	0/0:8,0:8:12.04:0,12,1033	0/0:25,0:17:8.96:0,9,155	0/0:21,0:14:3.01:0,3,92	0/0:11,0:11:15.05:0,15,1094	0/1:12,0:26:99:236,0,245	0/0:11,0:11:18.06:0,18,1352	0/0:24,0:23:13.27:0,13,408	0/0:19,0:26:21.06:0,21,801	0/0:26,0:26:59.75:0,60,3880	0/0:13,0:13:12.04:0,12,921	0/0:16,0:16:30.09:0,30,1955	0/0:18,0:17:33.08:0,33,2046	0/0:15,0:15:18.05:0,18,1096	0/0:22,0:26:49.51:0,50,3893	0/0:12,0:14:21.07:0,21,1404	0/0:9,0:18:33.11:0,33,2038	0/0:9,0:14:18.01:0,18,346	0/0:20,0:20:22.87:0,23,664	0/0:12,0:12:15.04:0,15,490	0/0:16,0:15:15.05:0,15,694	0/0:32,0:32:42.14:0,42,3152	0/0:17,0:16:30.09:0,30,2350	0/0:31,0:34:51.59:0,52,3396	0/0:14,0:14:33.11:0,33,2649	0/0:17,0:21:42.12:0,42,1687	0/0:13,0:21:19.71:0,20,1233	0/0:5,0:6:18.06:0,18,880
chr10	99840643	.	C	CG	8816.91	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-13.140;DP=650;FS=0.311;HRun=5;HaplotypeScore=59.8822;InbreedingCoeff=0.9998;MQ=75.21;MQ0=0;MQRankSum=-0.766;QD=30.94;ReadPosRankSum=0.028;VQSLOD=5.1920;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,31:37:63.20:829,63,0	0/0:14,0:14:36.09:0,36,386	0/0:18,0:18:45.10:0,45,477	0/0:19,0:19:31.06:0,31,412	0/0:18,0:18:48.11:0,48,510	0/0:16,0:16:42.11:0,42,451	0/0:13,0:13:33.08:0,33,354	1/1:2,27:29:81.26:1052,81,0	1/1:1,22:23:63.20:825,63,0	0/0:17,0:17:36.09:0,36,387	0/0:23,0:23:63.13:0,63,652	0/0:24,0:24:69.05:0,69,711	0/0:30,0:30:84.08:0,84,865	0/0:19,0:19:51.07:0,51,534	0/0:21,0:21:60.15:0,60,644	0/0:16,0:16:45.11:0,45,483	0/0:30,0:30:75.15:0,75,794	1/1:3,34:37:93.30:1222,93,0	1/1:2,22:24:69.17:855,69,0	1/1:2,29:31:63.16:806,63,0	1/1:4,40:44:93.30:1222,93,0	0/0:17,0:17:45.07:0,45,470	0/0:14,0:14:36.09:0,36,386	0/0:36,0:36:93.21:0,93,989	0/0:20,0:20:51.12:0,51,547	1/1:0,23:23:63.16:783,63,0	1/1:2,22:24:60.20:789,60,0	1/1:0,13:13:33.11:434,33,0
chr10	99841250	.	T	TAAA	2351.07	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=7.652;DP=300;FS=4.026;HRun=0;HaplotypeScore=52.4307;InbreedingCoeff=0.8675;MQ=77.91;MQ0=0;MQRankSum=-3.210;QD=23.75;ReadPosRankSum=1.567;VQSLOD=3.3141;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:18:30.05:124,30,0	0/0:4,0:4:9.03:0,9,168	0/0:17,0:11:17.90:0,18,253	0/0:18,0:12:21.88:0,22,238	0/0:22,0:22:66.21:0,66,1164	0/0:13,0:13:27.09:0,27,347	0/0:5,0:5:15.05:0,15,280	1/1:7,9:17:26.99:290,27,0	0/0:1,0:1:2.99:0,3,24	0/0:17,0:17:51.17:0,51,922	0/0:10,0:10:30.09:0,30,530	0/0:6,0:6:18.05:0,18,304	0/0:4,0:4:12.04:0,12,210	0/0:3,0:3:9.03:0,9,168	0/0:8,0:8:24.08:0,24,437	0/0:1,0:1:3.01:0,3,56	0/0:22,0:22:66.20:0,66,1177	0/0:9,0:9:23.98:0,24,209	1/1:4,3:7:20.94:269,21,0	1/1:0,6:7:21.04:359,21,0	1/1:0,3:3:3.01:55,3,0	0/0:3,0:3:9.03:0,9,163	0/0:10,0:10:30.10:0,30,554	0/0:6,0:6:18.06:0,18,322	0/0:22,0:22:66.22:0,66,1170	1/1:1,8:12:28.63:338,29,0	1/1:4,8:12:12.98:278,13,0	1/1:6,12:20:54.12:836,54,0
chr10	99841251	.	T	TA	1407.39	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=8.567;DP=318;FS=3.147;HRun=10;HaplotypeScore=53.2879;InbreedingCoeff=0.7475;MQ=76.25;MQ0=0;MQRankSum=-4.872;QD=9.14;ReadPosRankSum=-1.345;VQSLOD=1.8451;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:42.09:437,42,0	0/0:4,0:4:11.97:0,12,95	0/0:17,0:11:11.57:0,12,76	0/1:18,0:13:29.99:30,0,32	0/0:22,0:23:26.50:0,26,392	1/1:0,13:13:27.07:288,27,0	0/0:6,0:6:14.96:0,15,120	1/1:23,0:21:23.24:121,23,0	0/0:1,0:1:2.60:0,3,10	0/0:15,0:17:49.01:0,49,380	0/0:10,0:10:26.97:0,27,222	0/0:6,0:6:14.98:0,15,123	0/0:4,0:4:8.98:0,9,72	0/0:3,0:3:8.99:0,9,74	0/0:8,0:8:17.97:0,18,148	0/0:1,0:1:3:0,3,25	0/0:23,0:23:53.91:0,54,443	0/1:9,0:9:2.17:2,0,63	1/1:13,0:12:25.64:129,26,0	1/1:8,0:8:22.81:117,23,0	1/1:5,0:5:3.31:15,3,0	0/0:3,0:3:5.99:0,6,49	0/0:10,0:10:26.97:0,27,222	0/0:6,0:6:14.97:0,15,121	0/0:22,0:22:44.87:0,45,365	1/1:11,0:11:18.71:95,19,0	1/1:15,0:15:25.92:146,26,0	1/1:20,0:20:44.04:228,44,0
chr10	99841401	.	AACACACACACAC	A	2336.74	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=3.874;DP=376;FS=0.733;HRun=0;HaplotypeScore=118.5707;InbreedingCoeff=0.6729;MQ=64.46;MQ0=13;MQRankSum=-3.699;QD=34.88;ReadPosRankSum=0.311;VQSLOD=3.3176;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:16.62:0,17,889	0/0:1,0:1:3.01:0,3,86	0/0:23,0:11:7.53:0,8,120	0/0:25,0:14:9:0,9,102	0/0:11,0:14:30.10:0,30,1353	0/0:8,0:21:21.07:0,21,347	0/0:9,0:13:21.06:0,21,901	0/1:17,0:17:13.90:49,0,14	0/0:5,0:9:15.05:0,15,366	0/0:12,0:12:24.08:0,24,1129	0/0:9,0:11:26.35:0,26,1371	0/0:4,0:4:6:0,6,188	0/0:6,0:6:6.02:0,6,293	0/0:2,0:2:3.01:0,3,176	0/0:7,0:11:15.05:0,15,823	0/0:6,0:6:12.02:0,12,552	0/0:40,0:41:91.13:0,91,4234	0/0:11,0:17:30.10:0,30,860	1/1:4,9:13:20.99:486,21,0	1/1:6,6:11:17.97:456,18,0	./.	0/0:3,0:4:9.03:0,9,464	0/0:8,0:7:6.01:0,6,201	0/0:17,0:19:21.07:0,21,1071	0/0:12,0:17:36.12:0,36,1787	1/1:2,7:10:21.04:551,21,0	1/1:3,5:10:30.10:855,30,0	1/1:3,2:5:3.01:104,3,0
chr10	99842082	.	C	CT	6601.36	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=17.562;DP=499;FS=10.275;HRun=0;HaplotypeScore=91.9814;InbreedingCoeff=0.9933;MQ=77.55;MQ0=0;MQRankSum=-6.734;QD=36.67;ReadPosRankSum=0.179;VQSLOD=3.7904;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:66.22:940,66,0	0/0:7,0:7:21.07:0,21,294	0/0:18,0:18:54.14:0,54,723	0/0:18,0:17:48.15:0,48,645	0/0:17,0:17:51.17:0,51,711	0/0:30,0:30:90.28:0,90,1239	0/0:20,0:19:60.20:0,60,839	1/1:6,19:25:61.30:865,61,0	1/1:2,10:12:33.10:456,33,0	0/0:19,0:19:57.19:0,57,796	0/0:21,0:21:63.21:0,63,880	0/0:16,0:16:48.16:0,48,671	0/0:13,0:13:36.12:0,36,498	0/0:15,0:15:45.14:0,45,613	0/0:28,0:28:84.26:0,84,1142	0/0:27,0:27:75.22:0,75,1023	0/0:20,0:20:60.18:0,60,821	1/1:0,6:6:18.06:259,18,0	1/1:0,15:15:41.94:608,42,0	1/1:1,31:32:78.22:1085,78,0	1/1:0,20:20:39.13:549,39,0	0/0:9,0:9:27.09:0,27,378	0/0:16,0:16:48.16:0,48,670	0/0:15,0:15:45.15:0,45,629	0/0:10,0:10:30.10:0,30,419	1/1:0,19:19:57.16:802,57,0	1/1:1,21:22:60.20:864,60,0	1/1:1,4:5:12.04:174,12,0
chr10	99842220	.	GTTTTA	G	4707.69	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=12.353;DP=528;FS=5.602;HRun=0;HaplotypeScore=111.7704;InbreedingCoeff=0.9569;MQ=66.21;MQ0=1;MQRankSum=-11.665;QD=33.63;ReadPosRankSum=-3.089;VQSLOD=3.6025;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:60.16:0,60,1622	0/0:13,0:13:39.13:0,39,1085	0/0:9,0:8:6.48:0,6,74	0/0:9,0:7:7.80:0,8,244	0/0:28,0:28:72.25:0,72,2108	0/0:26,0:26:72.25:0,72,2091	0/0:12,0:12:24.07:0,24,644	1/1:13,19:30:48.04:762,48,0	0/0:11,0:11:27.05:0,27,731	0/0:24,0:24:69.21:0,69,1837	0/0:18,0:18:54.14:0,54,1534	0/0:22,0:22:60.21:0,60,1759	0/0:13,0:13:27.09:0,27,800	0/0:16,0:16:48.16:0,48,1421	0/0:24,0:24:63.20:0,63,1735	0/0:24,0:24:63.22:0,63,1846	0/0:24,0:24:60.19:0,60,1677	0/0:32,0:31:93.30:0,93,2616	1/1:10,7:17:18.05:308,18,0	1/1:9,22:31:60.21:1181,60,0	./.	0/0:5,0:5:12.04:0,12,352	0/0:11,0:11:33.11:0,33,916	0/0:9,0:9:27.04:0,27,609	0/0:24,0:24:63.22:0,63,1838	1/1:4,17:21:51.13:920,51,0	1/1:2,20:22:48.16:945,48,0	1/1:5,12:17:30.10:591,30,0
chr10	99843294	.	GAGCTAAAACAAGACTTATA	G	16451.16	PASS	AB=0.708;AC=19;AF=0.339;AN=56;BaseQRankSum=15.204;DP=539;FS=0.834;HRun=0;HaplotypeScore=276.6997;InbreedingCoeff=0.8132;MQ=75.09;MQ0=0;MQRankSum=-13.266;QD=81.85;ReadPosRankSum=3.361;VQSLOD=3.9378;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,18:25:33.11:1742,33,0	0/0:8,0:8:24.08:0,24,2155	0/0:13,0:13:33.09:0,33,1944	0/0:14,0:14:33.11:0,33,2256	0/0:38,0:38:99:0,111,9125	0/0:28,0:28:81.28:0,81,6426	0/0:15,0:15:45.15:0,45,3563	1/1:13,15:28:45.15:1748,45,0	1/1:3,13:16:27.09:1455,27,0	0/0:21,0:21:60.12:0,60,4882	0/0:21,0:21:63.22:0,63,5306	0/0:20,0:20:57.20:0,57,5001	0/0:14,0:14:42.14:0,42,3541	0/0:20,0:20:57.18:0,57,4503	0/0:17,0:17:48.16:0,48,4265	0/1:16,1:17:99:111,0,4177	0/0:30,0:30:90.31:0,90,7785	1/1:1,12:13:30.09:1618,30,0	1/1:4,11:15:27.09:1456,27,0	1/1:8,15:23:36.12:1941,36,0	0/1:4,6:10:0:0,0,0	0/0:18,0:18:54.19:0,54,4650	0/0:24,0:24:69.22:0,69,4961	0/0:17,0:17:45.15:0,45,3768	0/0:20,0:20:60.21:0,60,5231	0/1:5,20:25:99:2823,0,213	1/1:2,13:15:33.11:1778,33,0	1/1:1,12:13:33.11:1779,33,0
chr10	99843460	.	C	CT	5390.17	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-9.278;DP=573;FS=11.395;HRun=9;HaplotypeScore=56.6218;InbreedingCoeff=0.8652;MQ=81.50;MQ0=0;MQRankSum=-2.255;QD=22.94;ReadPosRankSum=-1.180;VQSLOD=4.6200;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,33:36:72.15:782,72,0	0/0:12,0:12:32.99:0,33,287	0/0:20,0:19:6.26:0,6,262	0/1:14,0:14:11.80:12,0,78	0/0:23,0:23:59.97:0,60,520	0/0:24,0:25:68.01:0,68,579	0/0:17,0:17:47.99:0,48,417	1/1:7,18:25:33.91:556,34,0	1/1:2,28:30:55.18:835,55,0	0/0:23,0:23:53.98:0,54,469	0/0:12,0:12:35.99:0,36,313	0/0:23,0:23:59.96:0,60,517	0/0:16,0:16:44.98:0,45,391	0/0:13,0:13:35.98:0,36,313	0/0:22,0:22:56.96:0,57,491	0/0:16,1:17:14.83:0,15,354	0/0:31,0:31:86.93:0,87,745	1/1:4,15:19:42.11:463,42,0	1/1:6,16:22:2.01:466,2,0	1/1:11,10:21:42.08:441,42,0	1/1:1,14:15:19.13:439,19,0	0/0:21,0:21:47.98:0,48,417	0/0:14,1:15:11.84:0,12,331	0/0:23,0:23:62.87:0,63,528	0/0:24,0:24:56.97:0,57,495	1/1:5,18:23:8.04:538,8,0	1/1:1,17:18:42.11:461,42,0	1/1:0,12:12:36.10:398,36,0
chr10	99845190	.	A	ATT	1169.25	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.376;DP=451;FS=10.118;HRun=10;HaplotypeScore=57.2953;InbreedingCoeff=0.9372;MQ=66.13;MQ0=1;MQRankSum=2.104;QD=27.84;ReadPosRankSum=2.308;VQSLOD=2.7534;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:54.08:0,54,549	0/0:8,0:9:11.76:0,12,174	0/0:11,0:10:5.72:0,6,113	0/0:11,0:10:18.02:0,18,177	0/0:22,0:22:54.03:0,54,534	1/1:0,16:16:33.11:491,33,0	0/0:13,0:13:27.01:0,27,266	0/0:43,0:44:95.87:0,96,949	1/1:2,7:9:24.08:345,24,0	0/0:16,0:16:42.09:0,42,427	0/0:18,0:18:42.07:0,42,427	0/0:14,0:14:36.05:0,36,359	0/0:13,0:13:39.09:0,39,397	0/0:14,0:14:39.07:0,39,390	0/0:18,0:18:45.10:0,45,457	0/0:15,0:15:39.07:0,39,397	0/0:31,0:31:69.07:0,69,693	1/1:3,13:17:33.11:475,33,0	0/0:14,0:15:32.76:0,33,305	0/0:15,0:16:41.81:0,42,408	0/0:8,0:8:18.02:0,18,183	0/0:6,0:6:15.03:0,15,153	0/0:12,0:12:36.05:0,36,352	0/0:19,0:20:44.79:0,45,432	0/0:14,0:14:36.08:0,36,366	0/0:19,0:19:54.12:0,54,549	0/0:14,0:14:30.01:0,30,305	0/0:6,0:8:20.79:0,21,195
chr10	99846604	.	AAGAG	A	655.62	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=5.170;DP=588;FS=1.517;HRun=0;HaplotypeScore=136.0423;InbreedingCoeff=0.6894;MQ=57.17;MQ0=11;MQRankSum=3.562;QD=6.30;ReadPosRankSum=-3.082;VQSLOD=2.1500;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:15:11.63:12,0,88	0/0:11,0:12:35.87:0,36,661	0/0:28,0:12:21.06:0,21,388	0/0:22,0:14:21.56:0,22,445	0/0:41,0:41:99:0,105,2149	0/0:21,0:21:30.03:0,30,525	0/0:18,0:18:42.11:0,42,778	0/0:22,0:17:35.61:0,36,281	0/0:21,0:21:42.02:0,42,842	0/0:21,0:21:60.13:0,60,1123	0/0:32,0:32:87.16:0,87,1771	0/0:19,0:19:54.14:0,54,1144	0/0:16,0:16:36.08:0,36,732	1/1:2,15:16:6.02:104,6,0	0/0:22,0:22:54.13:0,54,1173	0/0:27,0:27:69.16:0,69,1349	0/0:31,0:31:84.09:0,84,1540	0/0:18,0:18:45.12:0,45,887	0/0:14,0:12:24.05:0,24,313	0/0:23,0:23:3.81:0,4,252	0/0:9,0:9:5.93:0,6,60	1/1:5,19:23:41.73:465,42,0	1/1:5,18:23:4.33:120,4,0	1/1:4,20:24:6.49:97,6,0	0/0:21,0:21:52.25:0,52,923	0/0:12,0:12:33.11:0,33,531	0/0:21,0:21:38.69:0,39,454	0/0:13,0:13:4.77:0,5,327
chr10	99846617	.	A	AAG	1809.38	PASS	AB=0.863;AC=7;AF=0.125;AN=56;BaseQRankSum=10.915;DP=625;FS=19.002;HRun=0;HaplotypeScore=150.8721;InbreedingCoeff=-0.1506;MQ=52.72;MQ0=15;MQRankSum=-12.046;QD=11.67;ReadPosRankSum=-4.817;VQSLOD=1.0151;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:10,3:12:7.19:7,0,37	0/0:14,0:14:29.41:0,29,616	0/0:29,0:11:32.93:0,33,424	0/0:24,0:11:30.08:0,30,394	0/0:40,0:40:99:0,114,1816	0/0:16,0:16:24.08:0,24,385	0/0:17,0:18:50.20:0,50,781	0/1:35,0:27:37.14:480,0,37	0/0:20,0:20:42.14:0,42,663	0/0:25,0:25:72.25:0,72,1142	0/0:32,0:32:93.32:0,93,1490	0/0:18,0:18:54.18:0,54,868	0/0:12,0:12:36.12:0,36,585	0/0:17,0:16:8.37:0,8,67	0/0:27,0:27:73.96:0,74,1175	0/0:25,0:25:69.23:0,69,1110	0/0:33,0:33:89.42:0,89,1393	0/0:18,0:18:48.16:0,48,737	0/1:17,1:16:99:181,0,142	0/1:20,10:30:17.08:522,0,17	0/0:7,0:7:2.97:0,3,20	0/0:26,0:25:54.59:0,55,594	0/0:21,0:21:5.53:0,6,160	0/0:24,0:24:8.02:0,8,131	0/0:24,0:24:69.13:0,69,1073	0/1:16,2:18:99:148,0,193	0/1:20,5:25:25.89:331,0,26	0/1:12,4:16:82.71:267,0,83
chr10	99846619	.	A	AG	464.12	PASS	AB=0.829;AC=7;AF=0.125;AN=56;BaseQRankSum=7.097;DP=598;FS=12.743;HRun=1;HaplotypeScore=128.2299;InbreedingCoeff=0.1558;MQ=53.68;MQ0=15;MQRankSum=-3.804;QD=4.99;ReadPosRankSum=0.553;VQSLOD=-0.7141;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,3:12:14.89:122,15,0	0/0:14,0:14:42.07:0,42,559	0/0:29,0:11:30.07:0,30,392	0/0:23,0:11:30.03:0,30,360	0/0:40,0:40:99:0,114,1564	0/0:16,0:16:26.74:0,27,310	0/0:18,0:18:54.06:0,54,707	0/0:37,0:29:75.20:0,75,887	0/0:18,0:18:40.32:0,40,492	0/0:26,0:26:72.23:0,72,982	0/0:32,0:32:96.32:0,96,1333	0/0:19,0:19:57.18:0,57,780	0/0:12,0:12:36.12:0,36,503	0/0:17,0:16:8.89:0,9,76	0/0:28,0:28:75.22:0,75,1003	0/0:26,0:26:75.25:0,75,1043	0/0:30,1:31:38.71:0,39,1081	0/0:18,0:18:45.10:0,45,604	0/1:15,1:14:15.30:15,0,282	0/1:18,4:22:99:100,0,260	0/0:4,1:5:6.02:0,6,78	0/0:26,0:25:59.95:0,60,678	0/0:21,0:21:17.99:0,18,213	0/0:24,0:24:17.94:0,18,185	0/0:24,0:25:58.62:0,59,904	0/1:9,4:13:96.85:162,0,97	0/1:11,1:13:57.86:58,0,206	0/1:10,6:16:99:141,0,125
chr10	99846621	.	G	GAGA	626.80	PASS	AB=0.866;AC=6;AF=0.107;AN=56;BaseQRankSum=6.496;DP=588;FS=5.593;HRun=0;HaplotypeScore=145.5816;InbreedingCoeff=-0.1184;MQ=53.59;MQ0=15;MQRankSum=-2.696;QD=6.67;ReadPosRankSum=-0.494;VQSLOD=2.5440;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:13:53.62:54,0,85	0/0:14,0:14:42.14:0,42,782	0/0:26,0:10:28.91:0,29,500	0/0:21,0:9:23.67:0,24,407	0/0:39,0:39:99:0,105,1933	0/0:16,0:16:29.14:0,29,424	0/0:18,0:18:51.09:0,51,869	0/0:37,0:29:80.72:0,81,1125	0/0:18,0:18:42.56:0,43,636	0/0:27,0:27:78.26:0,78,1393	0/0:32,0:32:96.33:0,96,1774	0/0:19,0:19:57.18:0,57,1026	0/0:12,0:12:36.12:0,36,669	0/0:17,0:16:9.03:0,9,166	0/0:26,0:26:75.25:0,75,1358	0/0:26,0:26:78.27:0,78,1403	0/0:31,0:31:83.99:0,84,1518	0/0:16,0:16:42.14:0,42,743	0/1:16,0:14:1.57:2,0,385	0/1:19,2:22:99:138,0,437	0/0:5,0:5:6.02:0,6,91	0/0:24,0:23:60.20:0,60,1051	0/0:21,0:21:20.99:0,21,358	0/0:24,0:24:18.06:0,18,310	0/0:25,0:25:70.48:0,70,1256	0/1:9,4:13:99:286,0,139	0/1:12,0:13:29.35:29,0,322	0/1:12,4:16:99:236,0,134
chr10	99846633	.	G	GGAAGGAAAGAAA	6990.32	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=10.906;DP=588;FS=6.422;HRun=0;HaplotypeScore=226.0244;InbreedingCoeff=0.8857;MQ=50.29;MQ0=16;MQRankSum=-13.772;QD=44.52;ReadPosRankSum=-3.925;VQSLOD=3.3426;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:17:16.14:149,16,0	0/0:16,0:16:44.97:0,45,1217	0/0:17,0:4:12.04:0,12,262	0/0:14,0:4:6.01:0,6,74	0/0:38,0:38:99:0,102,2405	0/0:17,0:17:29.10:0,29,527	0/0:16,0:16:35.75:0,36,823	1/1:45,0:35:89.93:1317,90,0	0/0:19,0:18:42.09:0,42,846	0/0:27,0:27:75.21:0,75,1993	0/0:28,0:28:84.13:0,84,2073	0/0:18,0:18:45.14:0,45,1227	0/0:14,0:14:39.11:0,39,939	0/0:19,0:18:14.99:0,15,231	0/0:28,0:28:56.06:0,56,1823	0/0:28,0:28:70.61:0,71,1718	0/0:30,0:30:79.59:0,80,2205	0/0:14,0:14:30.05:0,30,599	0/1:16,0:15:7.28:552,0,7	1/1:28,0:28:69.38:1602,69,0	1/1:5,0:5:12:254,12,0	0/0:22,0:21:56.07:0,56,1595	0/0:18,0:18:16.20:0,16,442	0/0:25,0:25:15.05:0,15,421	0/0:23,0:23:24.60:0,25,1873	1/1:15,0:15:35.92:758,36,0	1/1:15,0:15:41.93:1209,42,0	1/1:9,6:14:29.99:1149,30,0
chr10	99846648	.	AAGAGAG	A	971.25	PASS	AB=1.000;AC=7;AF=0.135;AN=52;BaseQRankSum=3.520;DP=632;FS=0.000;HRun=0;HaplotypeScore=185.5603;InbreedingCoeff=0.7106;MQ=49.75;MQ0=14;MQRankSum=-3.937;QD=12.14;ReadPosRankSum=-3.728;VQSLOD=1.4651;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:20.28:0,20,157	0/0:16,0:16:36.10:0,36,892	./.	./.	0/0:30,0:31:57.11:0,57,1631	1/1:5,17:21:2.71:301,3,0	0/0:18,0:18:33.10:0,33,857	0/0:57,0:46:5.82:0,6,306	1/1:7,15:21:18.06:377,18,0	0/0:26,0:26:63.19:0,63,1605	0/0:21,0:22:54.16:0,54,1412	0/0:17,0:17:36.08:0,36,859	0/0:15,0:15:29.74:0,30,620	0/0:21,0:20:24.08:0,24,722	0/0:24,0:26:63.18:0,63,1706	0/0:27,0:27:63.13:0,63,1646	0/0:36,0:36:53.80:0,54,1936	1/1:16,0:16:18.16:419,18,0	0/0:25,0:22:12.66:0,13,419	0/0:29,0:29:53.70:0,54,933	0/0:9,0:9:11.86:0,12,151	0/0:21,0:20:45.15:0,45,1304	0/0:18,0:18:27.01:0,27,698	0/0:26,0:27:31.75:0,32,1038	0/0:22,0:22:36.50:0,37,1418	0/0:21,0:19:2.37:0,2,401	0/0:28,0:27:14.25:0,14,859	0/1:20,0:19:2.32:2,0,378
chr10	99846652	.	G	GAAAGAA	1947.54	PASS	AB=0.939;AC=8;AF=0.143;AN=56;BaseQRankSum=11.404;DP=637;FS=8.365;HRun=0;HaplotypeScore=184.1594;InbreedingCoeff=0.1227;MQ=49.38;MQ0=16;MQRankSum=-9.491;QD=10.09;ReadPosRankSum=-0.987;VQSLOD=1.9934;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:5.30:0,5,142	0/0:14,0:14:39.12:0,39,806	0/0:9,0:4:12.02:0,12,153	0/0:13,0:2:5.98:0,6,66	0/0:32,0:32:87.25:0,87,1697	0/0:22,0:21:27.07:0,27,371	0/0:17,0:17:45.10:0,45,835	0/1:58,0:45:99:189,0,257	0/0:21,0:20:29.95:0,30,419	0/0:26,0:26:75.26:0,75,1642	0/0:22,0:22:63.17:0,63,1263	0/0:17,0:17:51.10:0,51,884	0/0:16,0:15:42.11:0,42,721	0/0:21,0:20:23.33:0,23,513	0/0:27,0:27:69.16:0,69,1413	0/0:25,0:25:72:0,72,1410	0/0:34,0:35:99:0,101,1846	0/0:16,0:16:19.50:0,20,376	0/1:28,0:25:60.17:60,0,327	1/1:26,3:29:15.98:463,16,0	0/1:10,0:10:8.05:40,0,8	0/0:24,0:23:48.16:0,48,1129	0/0:17,0:17:26.93:0,27,511	0/0:28,0:28:44.02:0,44,830	0/0:21,0:21:43.42:0,43,1274	0/1:19,1:18:70.42:288,0,70	0/1:24,5:28:99:506,0,128	0/1:15,4:18:36.82:542,0,37
chr10	99847059	.	T	TC	132.73	PASS	AB=0.897;AC=4;AF=0.167;AN=24;BaseQRankSum=2.685;DP=104;FS=1.265;HRun=0;HaplotypeScore=75.6124;InbreedingCoeff=0.1510;MQ=46.39;MQ0=0;MQRankSum=-2.115;QD=2.60;ReadPosRankSum=-1.588;VQSLOD=2.2426;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:8.99:0,9,88	./.	0/0:1,0:1:3.01:0,3,38	0/0:14,0:7:19.18:0,19,160	./.	./.	./.	0/1:28,3:25:99:120,0,315	./.	./.	./.	./.	./.	./.	./.	./.	0/0:17,0:17:33.04:0,33,394	0/0:6,0:6:11.95:0,12,142	1/1:4,1:4:8.70:90,9,0	0/0:1,0:1:3.01:0,3,30	0/0:1,0:1:3:0,3,28	./.	./.	./.	./.	0/0:3,0:3:7.57:0,8,63	0/0:5,0:5:11.85:0,12,116	0/1:13,2:15:14.63:15,0,211
chr10	99847061	.	T	TC	655.72	PASS	AB=0.952;AC=8;AF=0.364;AN=22;BaseQRankSum=3.375;DP=101;FS=9.204;HRun=0;HaplotypeScore=77.9931;InbreedingCoeff=0.2373;MQ=37.70;MQ0=0;MQRankSum=-2.509;QD=10.58;ReadPosRankSum=1.304;VQSLOD=3.6662;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:3.01:0,3,41	./.	./.	0/0:15,0:7:17.39:0,17,163	./.	./.	./.	0/1:27,3:26:4.78:411,0,5	./.	./.	./.	./.	./.	./.	./.	./.	0/0:15,0:15:27.03:0,27,319	0/0:6,0:6:11.95:0,12,142	1/1:3,1:3:9.03:126,9,0	0/0:1,0:1:1.25:0,1,3	1/1:1,0:1:0.89:2,1,0	./.	./.	./.	./.	0/1:2,0:3:0.21:38,0,0	0/1:5,0:5:0.23:0,0,42	0/1:14,0:17:39.84:170,0,40
chr10	99847063	.	T	TC	1261.89	PASS	AC=14;AF=0.636;AN=22;BaseQRankSum=2.022;DP=98;FS=22.775;HRun=0;HaplotypeScore=70.8257;InbreedingCoeff=0.6940;MQ=37.92;MQ0=0;MQRankSum=0.006;QD=20.69;ReadPosRankSum=1.918;VQSLOD=2.7599;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:3.01:0,3,33	./.	./.	0/0:13,0:6:17.64:0,18,167	./.	./.	./.	1/1:15,13:26:8.94:704,9,0	./.	./.	./.	./.	./.	./.	./.	./.	0/0:14,0:14:27.04:0,27,335	0/0:7,0:7:11.95:0,12,142	1/1:2,0:3:8.93:79,9,0	1/1:0,0:1:3.01:44,3,0	1/1:0,0:1:3.01:45,3,0	./.	./.	./.	./.	1/1:1,1:3:8.39:97,8,0	1/1:0,1:3:8.96:80,9,0	1/1:7,2:17:11.20:325,11,0
chr10	99847075	.	T	TC	1171.37	PASS	AB=0.856;AC=10;AF=0.417;AN=24;BaseQRankSum=2.282;DP=101;FS=0.000;HRun=0;HaplotypeScore=63.2451;InbreedingCoeff=0.4142;MQ=40.44;MQ0=1;MQRankSum=-1.409;QD=16.05;ReadPosRankSum=1.109;VQSLOD=5.1557;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:2,0:1:3.01:0,3,41	0/1:11,0:4:9.61:10,0,52	./.	0/0:1,0:1:3.01:0,3,41	./.	0/1:19,13:26:3.84:663,0,4	./.	./.	./.	./.	./.	./.	./.	./.	0/0:15,0:15:27.03:0,27,318	0/0:7,0:7:14.96:0,15,183	1/1:3,3:5:11.62:146,12,0	0/0:1,0:1:0:0,0,0	0/0:1,0:1:2.99:0,3,24	./.	./.	./.	./.	1/1:2,0:2:2.84:14,3,0	1/1:4,0:4:9.01:90,9,0	1/1:11,7:18:15.79:355,16,0
chr10	99847077	.	T	TCAA	2603.43	PASS	AB=0.875;AC=12;AF=0.545;AN=22;BaseQRankSum=1.367;DP=97;FS=12.935;HRun=0;HaplotypeScore=63.0988;InbreedingCoeff=0.5304;MQ=40.17;MQ0=1;MQRankSum=-1.904;QD=36.16;ReadPosRankSum=-0.434;VQSLOD=3.4023;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:2,0:1:3.01:0,3,50	0/1:10,0:4:1.45:1,0,37	./.	0/0:1,0:1:3.01:0,3,55	./.	1/1:29,0:25:74.41:1322,74,0	./.	./.	./.	./.	./.	./.	./.	./.	0/0:14,0:14:24.08:0,24,391	0/0:7,0:7:15.05:0,15,250	0/1:4,1:5:3.40:221,0,3	./.	1/1:0,1:1:2.94:18,3,0	./.	./.	./.	./.	1/1:2,0:2:6.01:83,6,0	1/1:2,2:4:12.04:228,12,0	1/1:11,4:18:48.02:838,48,0
chr10	99847079	.	T	TC	200.32	PASS	AB=0.810;AC=5;AF=0.192;AN=26;BaseQRankSum=2.832;DP=94;FS=9.620;HRun=0;HaplotypeScore=57.1146;InbreedingCoeff=-0.0955;MQ=41.50;MQ0=1;MQRankSum=-4.205;QD=4.26;ReadPosRankSum=-1.221;VQSLOD=1.8702;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:2,0:1:3.01:0,3,41	0/0:10,0:3:4.47:0,4,30	./.	0/0:1,0:1:3.01:0,3,41	./.	0/1:20,9:23:99:169,0,276	./.	0/0:1,0:1:3:0,3,27	./.	./.	./.	0/0:1,0:1:3:0,3,25	./.	./.	0/0:13,0:13:21.02:0,21,252	0/0:7,0:7:14.96:0,15,183	0/0:7,0:6:2.10:0,2,61	./.	1/1:1,0:1:2.90:16,3,0	./.	./.	./.	./.	0/1:1,1:2:34.37:34,0,35	0/0:3,0:3:7.08:0,7,44	0/1:15,0:15:61.03:73,0,61
chr10	99847518	.	AG	A	6548.49	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.052;DP=757;FS=4.879;HRun=7;HaplotypeScore=72.9035;InbreedingCoeff=0.9998;MQ=78.66;MQ0=1;MQRankSum=-4.728;QD=25.58;ReadPosRankSum=-0.132;VQSLOD=5.3921;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,59:64:99:1530,150,0	0/0:9,0:9:27.07:0,27,326	0/0:35,0:32:68.67:0,69,807	0/0:33,0:31:49.52:0,50,620	0/0:31,0:31:84.05:0,84,1011	0/0:25,0:25:69.21:0,69,855	0/0:19,0:19:57.14:0,57,677	1/1:1,32:33:90.02:856,90,0	0/0:20,0:20:54.14:0,54,650	0/0:30,0:30:84.27:0,84,1056	0/0:22,0:22:60.18:0,60,742	0/0:27,0:27:81.20:0,81,957	0/0:21,0:21:54.17:0,54,678	0/0:18,0:18:54.14:0,54,651	0/0:27,0:27:75.24:0,75,943	0/0:31,0:31:87.28:0,87,1093	0/0:26,0:26:69.15:0,69,813	0/0:20,0:20:48.11:0,48,563	1/1:3,26:29:75.12:744,75,0	1/1:0,21:21:62.89:578,63,0	1/1:0,29:29:72.16:734,72,0	0/0:29,0:29:80.96:0,81,956	0/0:28,0:28:81.19:0,81,940	0/0:34,0:34:93.25:0,93,1129	0/0:16,0:16:45.13:0,45,544	1/1:0,37:37:99:1097,111,0	1/1:4,17:21:45.10:459,45,0	1/1:0,22:22:54.12:551,54,0
chr10	99848354	.	TCACACACACACACACACACACACA	T	1890.73	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=6.141;DP=565;FS=12.609;HRun=0;HaplotypeScore=286.5090;InbreedingCoeff=0.7576;MQ=66.48;MQ0=17;MQRankSum=-4.956;QD=17.51;ReadPosRankSum=1.434;VQSLOD=0.7952;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:23:27.07:0,27,1036	0/0:4,0:4:12.04:0,12,885	0/1:38,0:16:6.54:7,0,314	0/0:36,0:15:3:0,3,27	0/0:7,0:13:12.04:0,12,676	1/1:16,9:25:12:330,12,0	0/0:11,0:11:15.05:0,15,932	0/0:16,0:15:17.73:0,18,892	1/1:11,12:24:18.06:1104,18,0	0/0:11,0:11:21.07:0,21,1420	0/0:13,0:16:27.09:0,27,2430	0/0:13,0:15:39.13:0,39,3138	0/0:18,0:19:33.11:0,33,2767	0/0:8,0:8:18.06:0,18,1653	0/0:24,0:27:57.17:0,57,4284	0/0:17,0:20:30.09:0,30,2226	0/0:34,0:43:81.28:0,81,7039	1/1:9,12:21:12:587,12,0	0/0:11,0:11:15.05:0,15,1135	0/0:12,0:15:24.08:0,24,1522	0/0:17,0:25:24.08:0,24,1970	0/0:15,0:16:23.84:0,24,1809	0/0:13,0:12:24.08:0,24,1901	0/0:35,0:36:75.21:0,75,6568	0/0:11,0:13:24.08:0,24,2277	0/0:21,0:22:45.15:0,45,3483	0/0:15,0:27:42.14:0,42,3124	0/0:4,0:14:24.08:0,24,2490
chr10	99848877	.	T	TAA	861.19	PASS	AB=0.909;AC=6;AF=0.107;AN=56;BaseQRankSum=1.933;DP=379;FS=10.251;HRun=11;HaplotypeScore=72.6773;InbreedingCoeff=0.2754;MQ=80.95;MQ0=0;MQRankSum=-2.396;QD=10.63;ReadPosRankSum=-0.842;VQSLOD=0.7734;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,30:39:68.81:930,69,0	0/0:2,0:2:6.01:0,6,58	0/0:16,0:19:34.62:0,35,273	0/1:8,0:8:13.25:13,0,23	0/0:12,0:13:23.95:0,24,282	0/1:6,0:14:27.44:27,0,60	0/0:10,0:10:24.02:0,24,233	0/0:11,0:10:14.96:0,15,145	0/0:9,0:10:23.70:0,24,206	0/0:8,0:8:21.03:0,21,204	0/0:8,0:9:14.92:0,15,134	0/0:14,0:14:36.03:0,36,349	0/0:13,0:13:39.06:0,39,378	0/0:14,0:14:33:0,33,314	0/0:14,0:16:29.45:0,29,257	0/0:14,0:14:39.06:0,39,378	0/0:18,0:20:50.73:0,51,460	0/1:12,0:12:9.38:9,0,220	0/0:10,0:10:17.98:0,18,170	0/0:12,0:12:30.01:0,30,291	0/0:17,0:18:44.75:0,45,419	0/0:18,0:19:41.97:0,42,449	0/0:11,0:11:30.05:0,30,291	0/0:20,0:21:41.94:0,42,451	0/1:8,0:8:1.35:1,0,174	0/0:12,0:13:29.77:0,30,274	0/0:12,0:13:26.71:0,27,238	0/0:8,0:8:21.02:0,21,204
chr10	99848942	.	GGGGGTGT	G	337.45	PASS	AC=2;AF=0.043;AN=46;BaseQRankSum=4.170;DP=177;FS=1.546;HRun=0;HaplotypeScore=46.2525;InbreedingCoeff=0.2536;MQ=73.76;MQ0=0;MQRankSum=-3.247;QD=18.75;ReadPosRankSum=1.720;VQSLOD=2.2569;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,10:18:23.96:427,24,0	0/0:2,0:2:0.89:0,1,2	0/0:12,0:11:17.17:0,17,333	0/0:19,0:14:14:0,14,358	0/0:6,0:6:3.01:0,3,112	0/0:8,0:8:3.01:0,3,110	./.	0/0:8,0:8:6.02:0,6,84	0/0:2,0:2:3.01:0,3,107	0/0:5,0:5:12.01:0,12,264	0/0:4,0:4:9.03:0,9,299	0/0:5,0:5:9.03:0,9,335	./.	0/0:4,0:4:6.02:0,6,198	0/0:7,0:7:15.05:0,15,533	0/0:4,0:4:3.01:0,3,112	0/0:8,0:8:15.94:0,16,492	0/0:7,0:7:12.04:0,12,447	./.	0/0:2,0:2:3.01:0,3,112	0/0:20,0:20:33.11:0,33,1059	./.	0/0:2,0:2:6.01:0,6,137	./.	0/0:3,0:3:3.01:0,3,112	0/0:7,0:7:3.01:0,3,112	0/0:2,0:2:3.01:0,3,112	0/0:2,0:2:3.01:0,3,77
chr10	99849077	.	C	CA	913.50	PASS	AB=0.854;AC=28;AF=0.519;AN=54;BaseQRankSum=6.195;DP=302;FS=23.108;HRun=15;HaplotypeScore=60.7411;InbreedingCoeff=0.3937;MQ=65.18;MQ0=0;MQRankSum=-4.350;QD=5.13;ReadPosRankSum=-3.283;VQSLOD=-0.1431;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:21:33.81:144,34,0	0/0:3,0:4:4.93:0,5,24	0/1:22,1:13:13.55:14,0,41	0/0:17,0:8:2.86:0,3,18	1/1:2,0:2:0.47:1,0,0	1/1:2,1:6:6.24:32,6,0	0/0:20,2:22:6.86:0,7,154	1/1:13,1:24:44.18:222,44,0	1/1:2,5:7:5.99:50,6,0	0/1:2,3:5:24.04:39,0,24	0/1:3,0:3:14.06:14,0,27	0/1:4,0:4:11.96:17,0,12	0/1:10,1:11:21.13:21,0,103	0/0:6,0:6:8.68:0,9,53	0/0:5,0:6:7.78:0,8,41	0/0:15,0:15:13.07:0,13,105	0/0:22,0:26:39.06:0,39,227	1/1:3,12:16:18.64:133,19,0	1/1:3,0:6:12.57:50,13,0	./.	1/1:4,1:10:5.77:31,6,0	0/0:8,0:8:7.71:0,8,80	0/0:3,0:3:2.84:0,3,15	0/0:15,0:17:16.21:0,16,95	0/1:2,3:5:3.63:42,0,4	1/1:8,1:10:13.17:70,13,0	1/1:9,1:13:27.44:143,27,0	1/1:2,0:9:14.20:71,14,0
chr10	99849382	.	CTTAA	C	3486.35	PASS	AB=0.857;AC=42;AF=0.875;AN=48;BaseQRankSum=1.541;DP=314;FS=0.000;HRun=0;HaplotypeScore=64.5045;InbreedingCoeff=0.4144;MQ=61.89;MQ0=0;MQRankSum=0.322;QD=12.82;ReadPosRankSum=-0.506;VQSLOD=2.5336;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:24:0.47:0,0,1	1/1:3,5:8:12.04:190,12,0	./.	./.	1/1:3,9:12:21.07:313,21,0	1/1:7,0:24:9.01:84,9,0	1/1:4,1:5:3.01:48,3,0	1/1:16,0:24:14.51:115,15,0	./.	1/1:5,9:13:27.09:408,27,0	1/1:2,2:4:6.02:95,6,0	1/1:4,6:10:15.05:237,15,0	1/1:6,4:10:6.02:95,6,0	1/1:5,5:10:12.04:190,12,0	1/1:5,9:14:18.06:285,18,0	1/1:4,3:7:6.02:95,6,0	1/1:9,18:27:45.15:712,45,0	1/1:9,0:17:9.01:84,9,0	1/1:10,0:16:15.02:140,15,0	0/1:3,0:5:0:0,0,0	0/1:7,0:7:0:0,0,0	1/1:6,1:7:3.01:48,3,0	1/1:4,1:5:3.01:47,3,0	./.	0/0:6,0:6:6.02:0,6,136	1/1:9,1:13:9.02:103,9,0	1/1:8,0:18:6.48:57,6,0	1/1:8,0:13:15.02:140,15,0
chr10	99849728	.	C	CT	2213.17	PASS	AB=0.947;AC=17;AF=0.304;AN=56;BaseQRankSum=-8.830;DP=480;FS=2.731;HRun=11;HaplotypeScore=61.1574;InbreedingCoeff=0.7636;MQ=69.93;MQ0=0;MQRankSum=1.091;QD=14.37;ReadPosRankSum=-0.643;VQSLOD=3.8139;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:18:24.91:0,25,71	0/0:12,1:13:2.40:0,2,195	0/0:5,0:6:12.11:0,12,68	0/1:6,0:6:8.70:9,0,26	0/0:34,1:35:56.16:0,56,614	0/0:23,0:23:61.82:0,62,457	0/1:10,1:12:3.58:4,0,154	1/1:9,18:27:34.15:494,34,0	0/0:12,0:11:29.88:0,30,231	0/0:24,0:24:50.76:0,51,391	0/0:18,0:18:32.83:0,33,255	0/0:12,0:13:28.87:0,29,215	0/0:13,0:13:35.85:0,36,277	0/0:9,0:9:20.84:0,21,156	0/0:19,1:20:23.30:0,23,362	0/0:15,0:15:32.84:0,33,254	0/0:28,0:28:64.77:0,65,494	0/0:38,0:38:98.54:0,99,738	1/1:4,5:9:18:172,18,0	1/1:0,12:12:35.99:344,36,0	1/1:1,6:8:14.86:136,15,0	0/0:21,0:21:41.76:0,42,322	0/1:10,1:11:0.56:1,0,179	0/0:6,0:6:14.94:0,15,116	0/0:14,0:14:32.87:0,33,255	1/1:5,23:27:24.91:637,25,0	1/1:5,24:27:51.05:518,51,0	1/1:6,6:12:9.02:91,9,0
chr10	99850054	.	C	CAT	1354.40	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.801;DP=580;FS=5.096;HRun=0;HaplotypeScore=87.5652;InbreedingCoeff=0.9694;MQ=77.46;MQ0=0;MQRankSum=-3.914;QD=48.37;ReadPosRankSum=-0.638;VQSLOD=4.4922;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:72.25:1449,72,0	0/0:4,0:4:12.04:0,12,196	0/0:25,0:23:60.17:0,60,923	0/0:28,0:28:56.58:0,57,889	0/0:41,0:41:99:0,120,1897	0/0:20,0:20:60.19:0,60,947	0/0:14,0:14:42.14:0,42,674	0/0:24,0:23:68.94:0,69,1025	0/0:21,0:21:60.19:0,60,933	0/0:32,0:32:93.32:0,93,1516	0/0:19,0:19:54.18:0,54,879	0/0:27,0:27:81.21:0,81,1266	0/0:12,0:12:33.11:0,33,537	0/0:19,0:19:51.04:0,51,772	0/0:28,0:28:72.22:0,72,1124	0/0:14,0:14:42.14:0,42,682	0/0:19,0:19:57.17:0,57,887	0/0:13,0:13:39.13:0,39,635	0/0:26,0:26:72.17:0,72,1117	0/0:18,0:18:51.16:0,51,806	0/0:17,0:17:45.11:0,45,681	0/0:21,0:21:63.22:0,63,1022	0/0:10,0:10:30.10:0,30,488	0/0:17,0:17:51.17:0,51,831	0/0:14,0:14:42.14:0,42,684	0/0:23,0:23:69.23:0,69,1099	0/0:27,0:27:78.27:0,78,1267	0/0:19,0:19:57.19:0,57,928
chr10	99850080	.	TA	T	2729.76	PASS	AB=0.799;AC=15;AF=0.268;AN=56;BaseQRankSum=10.671;DP=556;FS=11.977;HRun=11;HaplotypeScore=66.3846;InbreedingCoeff=0.7468;MQ=73.65;MQ0=0;MQRankSum=-0.628;QD=14.37;ReadPosRankSum=-1.562;VQSLOD=2.3709;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:51.11:0,51,536	0/0:5,0:5:15.02:0,15,152	0/1:15,2:14:8.69:9,0,115	0/1:10,1:11:3.92:4,0,86	0/0:35,2:38:56.38:0,56,783	0/0:25,0:25:69.15:0,69,722	0/0:12,1:13:11.45:0,11,327	1/1:3,27:30:80.85:654,81,0	0/0:22,0:22:60.05:0,60,609	0/0:31,1:32:50.54:0,51,735	0/0:15,0:15:42.09:0,42,436	0/0:22,0:23:56.28:0,56,626	0/0:14,1:15:17.49:0,17,390	0/0:15,0:15:17.55:0,18,387	0/0:29,0:29:84.19:0,84,881	0/0:13,0:14:38.97:0,39,398	0/0:21,0:21:57.14:0,57,608	0/0:15,0:15:39.09:0,39,407	1/1:6,18:24:50.88:413,51,0	1/1:3,25:28:65.86:541,66,0	1/1:1,9:10:26.96:221,27,0	0/0:16,0:16:36.09:0,36,384	0/0:10,0:10:2.54:0,3,224	0/0:16,0:16:32.57:0,33,326	0/0:16,0:16:39.09:0,39,410	0/1:7,18:25:4.02:383,0,4	1/1:7,18:25:44.93:369,45,0	1/1:3,14:19:17.03:325,17,0
chr10	99850309	.	G	GT	1251.03	PASS	AB=0.932;AC=12;AF=0.214;AN=56;BaseQRankSum=-6.545;DP=523;FS=0.493;HRun=13;HaplotypeScore=59.4690;InbreedingCoeff=0.4831;MQ=78.41;MQ0=1;MQRankSum=0.461;QD=7.92;ReadPosRankSum=-0.362;VQSLOD=2.2641;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,19:27:44.89:404,45,0	0/0:4,0:4:8.91:0,9,61	0/1:18,0:13:8.45:8,0,24	0/0:17,0:18:4.18:0,4,80	0/0:25,1:30:15.45:0,15,354	1/1:4,19:23:27.55:397,28,0	0/1:9,1:11:5:5,0,106	0/0:26,1:30:18.53:0,19,262	1/1:3,20:25:33.16:426,33,0	0/0:28,1:30:64.36:0,64,435	0/0:20,0:20:35.66:0,36,247	0/0:15,0:18:33.79:0,34,216	0/0:12,0:12:26.68:0,27,180	0/0:11,0:13:28.74:0,29,188	0/0:19,1:21:21.75:0,22,283	0/0:13,0:16:36.76:0,37,236	0/0:22,0:22:53.43:0,53,363	1/1:5,10:15:0.27:138,0,0	0/1:16,2:18:14.02:14,0,204	0/0:16,2:22:3.41:0,3,270	0/0:11,0:11:20.80:0,21,144	0/0:14,0:14:35.66:0,36,246	0/0:13,0:14:34.75:0,35,232	0/0:13,0:13:35.67:0,36,244	0/0:14,0:14:29.68:0,30,203	0/0:25,0:26:63.99:0,64,424	0/1:18,2:21:17.98:18,0,174	0/0:13,0:16:24.76:0,25,150
chr10	99850582	.	T	TC	5000.50	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-13.458;DP=670;FS=4.684;HRun=7;HaplotypeScore=62.9946;InbreedingCoeff=0.9935;MQ=85.99;MQ0=1;MQRankSum=-1.459;QD=29.07;ReadPosRankSum=-0.998;VQSLOD=5.1765;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,1042	0/0:10,0:10:27.04:0,27,261	0/0:23,0:23:47.81:0,48,422	0/0:22,0:22:12.45:0,12,332	0/0:32,0:32:93.11:0,93,879	0/0:28,0:27:63.09:0,63,608	0/0:11,0:11:27.04:0,27,261	1/1:5,17:22:25.16:562,25,0	0/0:16,0:16:42.06:0,42,401	0/0:25,0:25:72.12:0,72,695	0/0:23,0:23:66.08:0,66,629	0/0:26,0:26:72.11:0,72,695	0/0:30,0:30:84.12:0,84,804	0/0:26,0:26:75.11:0,75,719	0/0:27,0:27:75.12:0,75,723	0/0:29,0:29:75.08:0,75,708	0/0:18,0:18:48.07:0,48,463	0/0:12,0:12:33:0,33,303	1/1:7,19:26:22.78:648,23,0	1/1:4,34:38:99:1189,99,0	1/1:2,21:23:31.21:660,31,0	0/0:25,0:25:72.10:0,72,688	0/0:32,0:32:87.13:0,87,838	0/0:31,0:31:90.10:0,90,859	0/0:13,0:13:36.05:0,36,347	1/1:5,19:24:57.15:674,57,0	1/1:1,24:25:69.21:833,69,0	1/1:2,12:14:36.11:434,36,0
chr10	99851055	.	GTATGGA	G	1511.06	PASS	AB=0.950;AC=12;AF=0.214;AN=56;BaseQRankSum=7.426;DP=760;FS=14.189;HRun=0;HaplotypeScore=176.7094;InbreedingCoeff=0.1295;MQ=52.12;MQ0=17;MQRankSum=-3.689;QD=8.73;ReadPosRankSum=-3.076;VQSLOD=1.4505;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:99:152,0,569	0/1:9,0:9:20.59:21,0,483	0/0:55,0:13:31.83:0,32,611	0/0:40,0:16:23.13:0,23,581	0/0:22,0:21:48.16:0,48,1427	0/0:25,0:25:51.17:0,51,1586	0/0:36,0:33:90.25:0,90,2339	0/1:22,0:19:55.63:56,0,983	0/0:31,0:30:72.18:0,72,2125	0/0:44,0:43:99:0,114,3076	0/0:24,0:24:57.20:0,57,1728	0/0:32,0:31:84.21:0,84,2314	0/0:28,0:28:74.76:0,75,2300	0/0:31,0:30:84.22:0,84,2474	0/0:47,0:47:99:0,118,3920	0/0:33,0:33:81.75:0,82,3080	0/0:24,0:23:36.82:0,37,1474	0/1:17,0:15:38.76:39,0,989	0/1:20,2:20:99:312,0,416	0/1:11,1:13:99:100,0,180	1/1:15,0:13:9.01:110,9,0	0/0:31,0:31:46.20:0,46,2133	0/0:27,0:27:69.16:0,69,2035	0/0:32,0:30:56.17:0,56,2602	0/0:23,0:23:63.01:0,63,1848	0/1:21,1:20:99:432,0,655	0/1:14,2:15:99:288,0,184	1/1:6,0:6:15.43:162,15,0
chr10	99851059	.	GGA	G	940.27	PASS	AB=0.907;AC=11;AF=0.196;AN=56;BaseQRankSum=9.120;DP=738;FS=14.146;HRun=0;HaplotypeScore=125.2548;InbreedingCoeff=0.1452;MQ=52.34;MQ0=16;MQRankSum=-4.150;QD=6.03;ReadPosRankSum=-3.264;VQSLOD=1.7390;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,4:28:41.07:41,0,610	0/0:11,0:11:2.34:0,2,446	0/0:49,3:12:33.08:0,33,585	0/0:40,0:13:22.32:0,22,461	0/0:21,0:20:48.14:0,48,872	0/0:27,0:27:57.19:0,57,1101	0/0:32,0:29:84.24:0,84,1621	0/1:20,0:17:18.09:18,0,841	0/0:31,1:30:74.92:0,75,1345	0/0:42,0:42:99:0,108,1980	0/0:23,1:24:56.78:0,57,1057	0/0:30,0:29:72.24:0,72,1385	0/0:28,0:28:28.09:0,28,1402	0/0:30,0:29:80.48:0,80,1409	0/0:48,0:48:99:0,115,2474	0/0:32,0:32:86.07:0,86,1779	0/0:23,0:22:17.95:0,18,1050	0/1:17,2:16:13.64:14,0,630	0/1:18,2:19:99:270,0,411	0/1:10,3:13:75.70:76,0,110	1/1:11,2:11:6.01:65,6,0	0/0:30,0:30:17.36:0,17,1205	0/0:24,0:24:69.14:0,69,1278	0/0:33,1:32:43.30:0,43,1664	0/0:22,0:22:60.06:0,60,1149	0/1:19,1:19:99:261,0,426	0/1:12,2:14:95.06:224,0,95	1/1:4,1:5:12.48:123,12,0
chr10	99851070	.	TGTATGA	T	233.21	PASS	AB=0.939;AC=7;AF=0.125;AN=56;BaseQRankSum=8.332;DP=713;FS=12.760;HRun=0;HaplotypeScore=155.8968;InbreedingCoeff=0.1547;MQ=48.67;MQ0=33;MQRankSum=-2.271;QD=3.38;ReadPosRankSum=-5.619;VQSLOD=-0.2890;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:26:6.79:0,7,1198	0/1:12,0:11:19.67:20,0,723	0/0:48,0:9:27.04:0,27,534	0/0:36,0:10:13.51:0,14,438	0/0:16,0:14:33.11:0,33,1007	0/0:29,0:27:54.66:0,55,1709	0/0:31,0:27:75.11:0,75,2558	0/0:25,0:21:56.36:0,56,1355	0/0:30,0:27:59.25:0,59,1718	0/0:36,0:29:87.28:0,87,2652	0/0:25,0:24:57.18:0,57,1712	0/0:33,0:28:69.23:0,69,2220	0/0:30,0:28:57.12:0,57,2054	0/0:26,0:24:57.17:0,57,1860	0/0:45,0:45:99:0,102,3730	0/0:33,0:32:56.65:0,57,2568	0/0:24,0:21:24.44:0,24,1775	0/0:24,0:19:11.27:0,11,1132	0/1:14,2:15:56.38:56,0,528	0/0:11,1:12:5.92:0,6,216	1/1:8,0:6:2.04:7,2,0	0/0:26,0:24:56.12:0,56,1618	0/0:25,0:21:57.20:0,57,1797	0/0:35,0:32:42.14:0,42,2399	0/0:25,0:21:48.04:0,48,1520	0/1:15,1:14:99:119,0,683	0/1:11,2:12:99:140,0,192	0/1:4,0:4:1.06:12,0,1
chr10	99851093	.	G	GTA	975.40	PASS	AB=0.672;AC=10;AF=0.179;AN=56;BaseQRankSum=4.440;DP=652;FS=55.375;HRun=0;HaplotypeScore=89.6889;InbreedingCoeff=0.5997;MQ=48.16;MQ0=63;MQRankSum=-4.716;QD=20.32;ReadPosRankSum=-0.484;VQSLOD=1.2447;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:20:51.17:0,51,781	0/0:11,0:10:24.08:0,24,368	0/0:35,0:1:3.01:0,3,31	0/0:25,0:3:6.02:0,6,78	0/0:11,0:10:24.07:0,24,346	0/0:26,2:26:48.03:0,48,730	0/0:39,0:26:66.21:0,66,1006	0/1:13,6:13:10.63:396,0,11	0/0:31,0:28:66.17:0,66,931	0/0:32,0:25:72.24:0,72,1082	0/0:24,0:22:51.16:0,51,760	0/0:33,0:29:63.21:0,63,953	0/0:34,0:32:87.21:0,87,1234	0/0:27,0:24:60.20:0,60,890	0/0:46,0:46:99:0,117,1751	0/0:34,0:32:78.25:0,78,1169	0/0:29,0:24:62.95:0,63,923	0/0:25,0:20:42.12:0,42,614	1/1:1,2:3:6.02:115,6,0	1/1:3,6:9:5.91:116,6,0	0/0:1,1:2:0:0,0,0	0/0:28,0:26:69.22:0,69,1031	0/0:25,0:20:57.18:0,57,843	0/0:38,0:33:81.28:0,81,1240	0/0:21,0:17:39.13:0,39,597	0/1:2,5:6:27.89:245,0,28	1/1:3,4:7:8.98:133,9,0	1/1:1,2:3:6.02:115,6,0
chr10	99851106	.	AGT	A	1284.58	PASS	AB=0.706;AC=5;AF=0.100;AN=50;BaseQRankSum=6.927;DP=669;FS=0.000;HRun=0;HaplotypeScore=90.9944;InbreedingCoeff=0.3596;MQ=47.72;MQ0=78;MQRankSum=-0.081;QD=14.12;ReadPosRankSum=1.588;VQSLOD=3.1971;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:22:44.67:0,45,733	0/0:12,0:11:27.09:0,27,451	./.	./.	0/0:15,0:14:30.09:0,30,467	1/1:7,24:29:39.02:502,39,0	0/0:42,0:28:51.06:0,51,747	0/0:19,0:9:8.96:0,9,83	0/1:5,25:25:8.47:459,0,8	0/0:35,0:28:66.23:0,66,1112	0/0:21,0:19:42.11:0,42,655	0/0:39,1:36:37.11:0,37,1121	0/0:34,2:34:42.64:0,43,1211	0/0:23,1:21:9.55:0,10,692	0/0:41,0:40:87.26:0,87,1401	0/0:35,0:33:69.22:0,69,1137	0/0:33,0:27:57.44:0,57,1074	0/1:6,18:19:17.47:436,0,17	0/1:6,0:4:0.34:0,0,37	0/0:9,0:9:9.02:0,9,101	./.	0/0:28,0:25:72.22:0,72,1160	0/0:20,0:16:42.13:0,42,678	0/0:41,0:36:75.20:0,75,1197	0/0:22,0:18:36.11:0,36,577	0/0:8,0:7:15.05:0,15,194	0/0:6,0:6:8.76:0,9,92	0/0:3,0:3:6.02:0,6,76
chr10	99851241	.	A	ATGGA	187.84	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=4.559;DP=756;FS=1.382;HRun=0;HaplotypeScore=111.5198;InbreedingCoeff=0.5158;MQ=49.36;MQ0=45;MQRankSum=-2.733;QD=7.83;ReadPosRankSum=-2.996;VQSLOD=1.7697;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:28:59.92:0,60,1035	0/0:9,0:7:18.06:0,18,334	0/0:40,0:3:7.55:0,8,83	0/0:32,0:4:9.03:0,9,160	0/0:23,0:22:63.22:0,63,1168	0/0:21,0:21:43.99:0,44,784	0/0:35,0:29:54.19:0,54,994	1/1:9,0:6:4.51:58,5,0	0/0:31,0:25:60.19:0,60,1060	0/0:44,0:37:99:0,102,1860	0/0:25,0:21:57.20:0,57,1051	0/0:48,0:45:99:0,111,1939	0/0:36,0:31:81.28:0,81,1462	0/0:36,0:33:89.98:0,90,1620	0/0:55,0:52:99:0,123,2263	0/0:42,0:40:96.33:0,96,1773	0/0:33,0:30:72.18:0,72,1259	0/0:29,0:28:63.89:0,64,1046	0/1:4,0:2:31.17:40,0,31	1/1:6,0:6:5.99:115,6,0	0/0:7,10:16:0.47:0,0,1	0/0:36,0:33:93.32:0,93,1712	0/0:30,0:28:66.21:0,66,1165	0/0:42,0:39:99:0,102,1833	0/0:32,0:28:81.26:0,81,1466	1/1:1,0:1:3.01:39,3,0	0/0:1,0:0:1.25:0,1,3	0/1:4,0:4:25.22:64,0,25
chr10	99851304	.	AGTGTGTGT	A	522.19	PASS	AB=0.863;AC=8;AF=0.160;AN=50;BaseQRankSum=4.188;DP=815;FS=0.000;HRun=0;HaplotypeScore=209.0805;InbreedingCoeff=0.3314;MQ=46.84;MQ0=51;MQRankSum=-0.961;QD=3.41;ReadPosRankSum=-1.724;VQSLOD=1.7338;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:27:35.88:36,0,77	0/0:8,0:7:6.02:0,6,189	./.	./.	0/0:33,0:32:42.13:0,42,1092	0/0:16,0:17:27.56:0,28,815	0/0:38,0:36:36.23:0,36,1389	1/1:36,0:31:6.02:98,6,0	0/0:28,0:26:24.34:0,24,452	0/0:35,0:33:48.16:0,48,1479	0/0:16,0:19:21.02:0,21,653	0/0:47,0:47:48.10:0,48,1276	0/0:31,0:32:47.46:0,47,1381	0/0:28,0:29:39.57:0,40,861	0/0:36,0:36:48.16:0,48,1501	0/0:41,0:41:69.13:0,69,2127	0/0:18,0:24:36.12:0,36,1001	0/0:19,0:20:31.48:0,31,485	./.	0/0:7,9:18:0.46:0,0,1	0/1:41,0:34:22.78:23,0,50	0/0:30,0:30:33.11:0,33,965	0/0:23,0:22:33.03:0,33,877	0/0:51,0:51:69.70:0,70,2214	0/0:20,0:23:27.05:0,27,704	0/1:16,6:17:99:121,0,224	0/1:9,7:15:37.33:173,0,37	1/1:5,1:6:9.03:204,9,0
chr10	99851864	.	GA	G	6222.97	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.821;DP=687;FS=0.657;HRun=4;HaplotypeScore=64.2587;InbreedingCoeff=0.9998;MQ=85.72;MQ0=0;MQRankSum=-6.550;QD=31.43;ReadPosRankSum=-0.446;VQSLOD=4.8542;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.19:0,66,889	0/0:15,0:15:42.14:0,42,588	0/0:27,0:27:78.26:0,78,1082	0/0:17,0:17:44.58:0,45,535	0/0:35,0:35:99:0,99,1369	0/0:28,0:28:84.26:0,84,1145	0/0:17,0:17:51.16:0,51,698	1/1:3,42:45:99:1479,126,0	0/0:24,0:24:69.22:0,69,949	0/0:35,0:35:99:0,102,1414	0/0:29,0:29:84.27:0,84,1159	0/0:24,0:24:66.21:0,66,909	0/0:12,0:12:36.09:0,36,470	0/0:21,0:21:60.20:0,60,839	0/0:29,0:29:84.28:0,84,1176	0/0:31,0:31:90.30:0,90,1260	0/0:20,0:19:60.18:0,60,821	0/0:10,0:10:27.05:0,27,356	1/1:0,14:14:42.07:475,42,0	1/1:2,22:24:63.19:755,63,0	1/1:0,29:29:72.22:864,72,0	0/0:23,0:23:69.20:0,69,944	0/0:26,0:26:69.22:0,69,949	0/0:16,0:15:48.12:0,48,648	0/0:27,0:27:78.26:0,78,1091	1/1:1,30:31:87.25:1031,87,0	1/1:2,36:38:96.29:1151,96,0	1/1:0,17:17:39.12:468,39,0
chr10	99853268	.	AACAC	A	688.23	PASS	AB=0.843;AC=7;AF=0.125;AN=56;BaseQRankSum=4.697;DP=555;FS=8.571;HRun=0;HaplotypeScore=95.6199;InbreedingCoeff=0.4427;MQ=74.97;MQ0=7;MQRankSum=1.660;QD=8.00;ReadPosRankSum=2.553;VQSLOD=1.4325;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:6.02:0,6,83	0/0:9,0:9:24.08:0,24,540	0/0:34,0:28:12.04:0,12,274	0/0:25,0:19:3.01:0,3,47	0/0:28,0:29:56.66:0,57,1236	1/1:4,13:17:30.10:483,30,0	0/0:19,0:19:36.07:0,36,709	0/0:31,0:30:48.16:0,48,953	1/1:7,5:12:9.03:145,9,0	0/0:24,0:24:42.10:0,42,865	0/0:13,0:14:33.09:0,33,625	0/0:16,0:16:30.10:0,30,683	0/0:11,0:11:21.04:0,21,426	0/0:14,0:15:14.79:0,15,273	0/0:13,0:15:26.83:0,27,581	0/1:17,1:19:8.93:9,0,696	0/0:22,0:23:39.13:0,39,885	0/1:8,6:14:25.33:178,0,25	0/0:16,0:15:21.07:0,21,377	0/0:18,0:17:6.02:0,6,99	0/0:16,0:16:8.92:0,9,125	0/0:16,0:17:29.84:0,30,634	0/0:13,0:14:21.07:0,21,458	0/0:35,0:35:57.15:0,57,1261	0/1:22,1:24:0.41:0,0,949	0/0:21,0:19:42.10:0,42,728	0/0:34,0:32:24.06:0,24,406	0/0:9,0:9:12.04:0,12,197
chr10	99853276	.	C	CACACACACACACACAT	2987.01	PASS	AB=0.953;AC=11;AF=0.196;AN=56;BaseQRankSum=6.334;DP=583;FS=0.604;HRun=0;HaplotypeScore=244.6934;InbreedingCoeff=-0.1057;MQ=64.58;MQ0=9;MQRankSum=-6.276;QD=14.02;ReadPosRankSum=-1.969;VQSLOD=1.9251;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,14:30:9.68:546,0,10	0/0:9,0:9:24.05:0,24,713	0/0:33,0:24:20.81:0,21,317	0/0:30,0:22:13.85:0,14,144	0/0:28,0:27:66.12:0,66,2138	0/0:18,0:18:42.02:0,42,1200	0/0:18,0:18:36.92:0,37,908	0/1:27,0:26:99:903,0,117	0/0:12,0:12:12.02:0,12,363	0/0:22,0:22:5.71:0,6,1216	0/0:15,0:15:36.04:0,36,827	0/0:22,0:22:53.89:0,54,1237	0/0:19,0:19:38.91:0,39,795	0/0:16,0:15:29.98:0,30,659	0/0:17,0:17:48.03:0,48,1227	0/0:22,0:22:39.40:0,39,1087	0/1:26,0:26:98.62:99,0,1350	0/1:16,0:16:33.08:33,0,390	0/1:16,0:15:51.14:51,0,103	0/1:17,0:16:40.90:185,0,41	0/1:18,0:17:49.26:49,0,73	0/0:17,0:17:45.02:0,45,1078	0/0:11,0:11:24.04:0,24,719	0/0:36,0:36:72.12:0,72,2331	0/0:24,0:24:57.12:0,57,1697	0/1:24,0:20:99:157,0,350	0/1:31,0:29:76.51:727,0,77	1/1:8,0:8:0.08:382,0,0
chr10	99855000	.	T	TAA	5077.84	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-0.309;DP=577;FS=12.219;HRun=12;HaplotypeScore=78.8547;InbreedingCoeff=0.9695;MQ=69.97;MQ0=0;MQRankSum=1.060;QD=20.31;ReadPosRankSum=-4.036;VQSLOD=1.8098;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:33:26.13:180,26,0	0/0:12,0:12:17.97:0,18,166	0/0:17,0:16:20.26:0,20,153	0/0:7,0:7:2.99:0,3,28	0/0:21,0:23:41.82:0,42,430	1/1:4,10:16:21.07:289,21,0	0/0:16,0:17:38.68:0,39,345	1/1:10,24:37:50.79:930,51,0	1/1:1,10:12:27.04:356,27,0	0/0:31,0:33:41.92:0,42,529	0/0:14,0:14:23.87:0,24,222	0/0:19,0:19:41.89:0,42,384	0/0:17,0:17:35.98:0,36,333	0/0:16,0:16:35.93:0,36,322	0/0:22,0:23:47.54:0,48,465	0/0:27,0:27:59.91:0,60,550	0/0:26,0:29:56.67:0,57,511	1/1:4,11:19:35.06:400,35,0	1/1:6,13:23:45.09:557,45,0	1/1:8,14:22:38.99:481,39,0	1/1:5,14:20:35.61:471,36,0	0/0:13,0:14:29.70:0,30,262	0/0:19,0:19:44.97:0,45,416	0/0:16,0:15:35.99:0,36,333	0/0:24,0:24:59.98:0,60,555	1/1:7,13:25:50.05:561,50,0	1/1:7,22:34:55.77:686,56,0	1/1:2,6:9:14.96:167,15,0
chr10	99856594	.	T	TCGC	3449.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.253;DP=804;FS=11.412;HRun=0;HaplotypeScore=112.2553;InbreedingCoeff=0.9989;MQ=91.85;MQ0=0;MQRankSum=-3.686;QD=63.87;ReadPosRankSum=2.194;VQSLOD=4.9035;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,50:54:99:3449,141,0	0/0:17,0:17:51.17:0,51,951	0/0:39,0:39:99:0,113,2059	0/0:29,0:29:81.19:0,81,1387	0/0:18,0:18:54.19:0,54,997	0/0:15,0:15:45.15:0,45,839	0/0:43,0:43:99:0,123,2288	0/0:30,0:30:84.27:0,84,1497	0/0:29,0:29:87.28:0,87,1587	0/0:14,0:14:42.14:0,42,753	0/0:16,0:16:48.16:0,48,893	0/0:30,0:30:90.31:0,90,1678	0/0:20,0:20:60.21:0,60,1118	0/0:27,0:27:78.27:0,78,1454	0/0:37,0:37:99:0,111,2038	0/0:35,0:35:99:0,105,1895	0/0:41,0:41:99:0,123,2269	0/0:32,0:32:90.31:0,90,1678	0/0:18,0:18:54.17:0,54,974	0/0:27,0:27:81.28:0,81,1500	0/0:69,0:69:99:0,205,3763	0/0:23,0:23:69.22:0,69,1246	0/0:23,0:23:66.20:0,66,1167	0/0:34,0:34:99:0,102,1828	0/0:27,0:27:78.27:0,78,1444	0/0:27,0:27:81.28:0,81,1507	0/0:21,0:21:63.22:0,63,1165	0/0:9,0:9:27.09:0,27,503
chr10	99858521	.	C	CT	974.85	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=2.582;DP=316;FS=0.000;HRun=1;HaplotypeScore=46.9114;InbreedingCoeff=0.8410;MQ=74.74;MQ0=6;MQRankSum=-4.781;QD=16.52;ReadPosRankSum=-1.746;VQSLOD=3.0073;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:30.72:0,31,261	0/0:3,0:3:6.02:0,6,72	0/0:45,0:13:22.40:0,22,194	0/0:30,0:12:20.14:0,20,155	0/1:5,0:5:2.71:3,0,86	0/0:10,0:10:20.59:0,21,109	0/0:12,0:12:33.05:0,33,377	1/1:9,3:12:32.91:305,33,0	0/0:5,0:7:8.45:0,8,27	0/0:6,0:6:14.86:0,15,133	0/0:8,0:8:20.22:0,20,188	0/0:11,0:11:33.07:0,33,383	0/0:8,0:8:24.03:0,24,247	0/0:13,0:13:33.97:0,34,348	0/0:14,0:14:29.72:0,30,358	0/0:9,0:10:18.01:0,18,186	0/0:18,0:18:33.08:0,33,390	0/0:18,0:19:4.82:0,5,49	1/1:6,0:7:12:112,12,0	1/1:3,1:6:14.94:137,15,0	1/1:5,2:7:11.81:118,12,0	0/0:4,0:4:9.91:0,10,110	0/0:7,0:6:15.02:0,15,153	0/0:8,0:8:16.75:0,17,255	0/0:9,0:9:26.01:0,26,246	1/1:4,0:6:8.95:87,9,0	1/1:7,3:10:26.79:286,27,0	1/1:5,1:6:14.93:116,15,0
chr10	99858770	.	T	TA	3787.42	PASS	AB=0.869;AC=24;AF=0.429;AN=56;BaseQRankSum=-8.516;DP=350;FS=12.009;HRun=10;HaplotypeScore=38.2974;InbreedingCoeff=0.6968;MQ=75.10;MQ0=0;MQRankSum=-0.802;QD=18.94;ReadPosRankSum=0.289;VQSLOD=3.1691;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:26.40:469,26,0	0/0:4,0:4:8.97:0,9,71	0/1:7,0:6:9.32:9,0,56	0/1:9,0:9:15.13:15,0,35	0/0:17,0:17:35.91:0,36,290	1/1:3,21:24:46.13:623,46,0	0/0:18,0:18:41.87:0,42,337	1/1:6,17:22:39.10:416,39,0	1/1:3,13:16:39.09:410,39,0	0/0:6,0:6:17.95:0,18,144	0/1:13,1:14:2.05:2,0,192	0/0:14,0:14:29.94:0,30,243	0/0:4,0:4:11.99:0,12,99	0/0:11,0:11:23.95:0,24,197	0/0:10,0:10:12.79:0,13,140	0/0:8,0:8:20.97:0,21,172	0/0:28,0:28:68.89:0,69,562	1/1:2,23:25:38.52:615,39,0	1/1:1,12:13:36.06:372,36,0	1/1:1,11:12:27:273,27,0	1/1:6,2:8:6.02:64,6,0	0/0:5,0:5:11.98:0,12,98	0/0:4,0:4:8.98:0,9,74	0/0:13,0:13:32.94:0,33,268	0/0:7,0:8:23.01:0,23,178	1/1:5,11:16:32.98:316,33,0	0/1:2,11:13:3.59:171,0,4	1/1:0,2:2:3.01:32,3,0
chr10	99858883	.	AAAAAAAAAAAAAAAAAG	A	237.79	PASS	AB=0.765;AC=1;AF=0.018;AN=56;BaseQRankSum=2.329;DP=404;FS=5.371;HRun=0;HaplotypeScore=135.2404;InbreedingCoeff=-0.0422;MQ=45.37;MQ0=28;MQRankSum=-0.484;QD=18.29;ReadPosRankSum=1.712;VQSLOD=2.4029;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:39.07:0,39,1126	0/0:4,0:4:9.03:0,9,315	0/0:32,0:6:17.24:0,17,273	0/0:47,0:5:4.10:0,4,28	0/0:21,0:21:60.16:0,60,2071	0/0:13,0:13:37.33:0,37,776	0/0:6,0:5:15.05:0,15,799	0/0:30,0:29:67.13:0,67,1600	0/0:5,0:5:11.01:0,11,61	0/0:14,0:12:36.12:0,36,1170	0/0:12,0:12:33.11:0,33,1106	0/0:7,0:6:18.01:0,18,832	0/0:8,0:8:24.08:0,24,1050	0/0:12,0:11:30.10:0,30,1642	0/0:14,0:14:33.10:0,33,1574	0/0:9,0:9:27.09:0,27,1264	0/0:20,0:19:45.14:0,45,1818	0/1:9,4:11:48.85:312,0,49	0/0:13,0:12:32.92:0,33,749	0/0:7,0:7:21.02:0,21,501	0/0:6,0:6:17.96:0,18,272	0/0:2,0:1:3.01:0,3,178	0/0:8,0:8:5.97:0,6,80	0/0:6,0:6:6.02:0,6,223	0/0:17,0:17:27.08:0,27,1120	0/0:17,0:15:41.99:0,42,787	0/0:23,0:22:48.60:0,49,1290	0/0:12,0:7:18.06:0,18,542
chr10	99858897	.	AAAG	A	518.60	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.925;DP=395;FS=45.411;HRun=0;HaplotypeScore=54.8450;InbreedingCoeff=0.2246;MQ=52.08;MQ0=23;MQRankSum=-4.545;QD=3.24;ReadPosRankSum=-1.152;VQSLOD=-0.0485;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,15:23:3.29:102,3,0	0/1:5,0:5:9.33:9,0,38	0/0:42,0:11:11.91:0,12,138	0/1:50,0:6:5.51:13,0,6	0/1:18,0:18:36.89:37,0,218	1/1:12,0:12:24.64:207,25,0	0/1:6,0:5:11.27:11,0,58	0/0:27,0:26:11.50:0,12,289	1/1:7,0:7:20.59:164,21,0	0/1:15,0:13:14.56:15,0,94	0/0:18,0:18:22.59:0,23,228	0/0:8,0:7:15.34:0,15,134	0/0:8,0:8:3.55:0,4,106	0/0:12,0:11:22.89:0,23,128	0/0:14,0:14:2.57:0,3,158	0/0:9,0:9:14.70:0,15,190	0/0:16,0:16:19.57:0,20,193	1/1:9,0:7:11.97:95,12,0	0/0:12,0:11:0.03:0,0,192	0/0:6,0:6:4.43:0,4,57	0/1:6,0:6:1.94:2,0,53	0/0:3,0:3:1.53:0,2,42	0/0:9,0:9:3.88:0,4,26	0/0:6,0:6:9:0,9,101	0/0:16,0:16:17.65:0,18,206	0/0:14,0:12:27.92:0,28,252	0/0:15,0:15:9.73:0,10,192	0/1:8,0:6:22.80:23,0,83
chr10	99859985	.	T	TCTTCTTCTTC	5386.99	PASS	AB=0.799;AC=13;AF=0.241;AN=54;BaseQRankSum=-6.392;DP=571;FS=3.653;HRun=0;HaplotypeScore=175.8124;InbreedingCoeff=0.2968;MQ=46.88;MQ0=28;MQRankSum=-2.874;QD=23.42;ReadPosRankSum=1.959;VQSLOD=4.4200;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:20:20.45:0,20,644	0/0:8,0:7:15.37:0,15,329	./.	0/0:39,0:9:10.79:0,11,165	0/0:22,0:21:55.81:0,56,957	0/1:15,0:27:64.07:64,0,74	0/0:15,0:10:22.25:0,22,581	1/1:35,0:35:51.73:1560,52,0	0/1:18,0:16:46.96:78,0,47	0/0:21,0:18:39.60:0,40,858	0/0:22,0:19:48.15:0,48,1061	0/0:15,0:13:33:0,33,723	0/0:16,0:14:42.01:0,42,996	0/0:14,0:12:24.02:0,24,576	0/0:24,0:24:50.03:0,50,946	0/0:17,0:17:41.87:0,42,556	0/0:32,0:29:65.36:0,65,1373	0/1:11,0:11:59.07:59,0,71	1/1:11,9:23:14.27:1009,14,0	0/1:14,12:29:5.48:646,0,5	1/1:9,0:10:10.41:207,10,0	0/0:10,0:10:26.40:0,26,366	0/0:14,0:14:27.15:0,27,638	0/0:12,0:11:26.51:0,27,651	0/0:17,0:15:39.10:0,39,965	0/1:9,11:24:84.17:1122,0,84	0/1:19,18:42:57.85:499,0,58	0/1:8,0:8:24.35:142,0,24
chr10	99860439	.	TA	T	884.42	PASS	AB=0.947;AC=8;AF=0.143;AN=56;BaseQRankSum=6.026;DP=544;FS=3.896;HRun=13;HaplotypeScore=56.3479;InbreedingCoeff=0.5685;MQ=73.13;MQ0=0;MQRankSum=-0.731;QD=7.90;ReadPosRankSum=2.752;VQSLOD=2.5566;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,26:33:71.48:520,71,0	0/0:11,0:11:24.03:0,24,229	0/1:23,0:18:21.25:21,0,69	0/0:12,0:9:5.23:0,5,36	0/0:20,2:22:4.25:0,4,360	0/0:24,0:25:37.82:0,38,488	0/0:16,0:17:18.76:0,19,221	0/0:32,0:32:38.10:0,38,478	1/1:6,11:17:3.62:190,4,0	0/0:21,1:22:26.18:0,26,405	0/0:23,0:23:54.06:0,54,510	0/0:19,0:19:44.84:0,45,410	0/0:20,1:21:1.62:0,2,163	0/0:10,0:10:21.01:0,21,194	0/0:21,0:21:45.04:0,45,423	0/0:16,0:16:33.04:0,33,315	0/0:26,3:29:48.40:0,48,606	1/1:5,15:21:40.78:287,41,0	0/0:15,0:16:35.87:0,36,327	0/0:17,1:18:26.17:0,26,416	0/0:12,0:13:32.88:0,33,300	0/0:10,0:10:18.02:0,18,170	0/0:13,0:13:30.04:0,30,287	0/0:16,0:16:39.04:0,39,369	0/1:15,2:17:7.82:8,0,244	0/0:30,1:32:46.99:0,47,584	0/0:14,0:17:38.71:0,39,335	0/0:15,0:16:46.09:0,46,405
chr10	99862938	.	GA	G	2998.19	PASS	AB=0.804;AC=24;AF=0.429;AN=56;BaseQRankSum=6.721;DP=539;FS=5.606;HRun=12;HaplotypeScore=64.8410;InbreedingCoeff=0.6820;MQ=74.44;MQ0=3;MQRankSum=0.242;QD=10.41;ReadPosRankSum=4.213;VQSLOD=3.0727;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:20:11.40:271,11,0	0/0:8,1:10:6.66:0,7,235	0/1:33,2:24:11.04:11,0,128	0/0:21,0:11:9.29:0,9,64	0/0:23,1:25:30.58:0,31,439	1/1:3,1:27:45.76:147,46,0	0/0:11,1:12:3.82:0,4,220	1/1:7,18:27:27.42:376,27,0	1/1:2,6:8:12.02:131,12,0	0/0:27,0:29:68.78:0,69,650	0/0:15,2:18:21.68:0,22,380	0/0:19,0:19:57:0,57,544	0/1:9,3:13:16.51:17,0,197	0/0:11,0:11:30.01:0,30,276	0/1:14,2:17:1.55:2,0,330	0/0:18,0:19:53.90:0,54,515	0/0:19,1:23:7.14:0,7,435	1/1:7,21:30:60.82:453,61,0	1/1:3,13:16:40.80:292,41,0	1/1:5,24:30:39.37:444,39,0	1/1:0,4:5:13.99:99,14,0	0/0:13,0:14:11.86:0,12,267	0/0:20,0:20:51.10:0,51,518	0/0:9,0:9:24.05:0,24,244	0/0:18,1:21:36.55:0,37,519	1/1:5,23:29:36.55:447,37,0	1/1:1,20:22:52.67:400,53,0	0/1:2,7:9:9.52:118,0,10
chr10	99863402	.	T	TCCC	536.83	PASS	AB=0.722;AC=8;AF=0.143;AN=56;BaseQRankSum=3.499;DP=432;FS=22.868;HRun=0;HaplotypeScore=80.0367;InbreedingCoeff=0.3280;MQ=73.55;MQ0=7;MQRankSum=2.017;QD=7.35;ReadPosRankSum=-1.657;VQSLOD=0.8875;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:23.23:0,23,266	0/0:8,0:8:23.94:0,24,272	0/0:48,0:19:38.38:0,38,436	0/0:34,0:17:17.90:0,18,164	0/0:16,0:16:38.90:0,39,489	0/0:15,0:15:33.10:0,33,459	0/0:12,0:12:36.12:0,36,573	0/1:7,4:16:99:218,0,102	0/0:7,0:17:24.03:0,24,251	0/0:10,0:10:27.09:0,27,416	0/0:15,0:15:36.03:0,36,514	0/0:18,0:18:46.98:0,47,621	0/0:14,0:14:35.95:0,36,493	0/0:9,0:9:18.03:0,18,244	0/0:17,0:17:48.03:0,48,739	0/0:12,0:12:33.07:0,33,481	0/0:23,0:23:60.19:0,60,930	0/0:26,0:26:75.83:0,76,819	0/1:14,0:14:39.70:144,0,40	0/1:5,0:12:19.47:92,0,19	0/0:4,0:4:8.71:0,9,69	0/0:8,0:8:21:0,21,292	0/0:8,0:8:23.96:0,24,318	0/0:8,0:8:17.81:0,18,214	0/0:21,0:21:60.19:0,60,900	1/1:12,0:12:5.99:128,6,0	0/1:6,0:16:17.58:18,0,85	1/1:3,0:3:7.26:73,7,0
chr10	99863403	.	ACC	A	749.77	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.478;DP=425;FS=0.860;HRun=10;HaplotypeScore=66.8999;InbreedingCoeff=0.7647;MQ=75.56;MQ0=7;MQRankSum=-0.875;QD=17.44;ReadPosRankSum=3.899;VQSLOD=2.1239;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:14:9.99:0,10,43	0/0:8,0:8:18:0,18,182	0/0:51,0:21:31.61:0,32,345	0/0:33,0:16:2.68:0,3,103	0/0:16,0:16:27.90:0,28,348	0/0:16,0:16:32.46:0,32,435	0/0:13,0:13:33.09:0,33,488	0/0:15,0:15:18.71:0,19,205	1/1:10,7:17:23.93:242,24,0	0/0:11,0:11:27.09:0,27,416	0/0:12,0:12:29.57:0,30,413	0/0:16,0:16:40.38:0,40,580	0/0:12,0:12:27.07:0,27,373	0/0:6,0:6:14.40:0,14,167	0/0:16,0:17:47.99:0,48,674	0/0:11,0:11:24.07:0,24,358	0/0:23,0:23:53.96:0,54,831	1/1:14,12:26:57.08:628,57,0	0/0:6,0:15:29.77:0,30,271	0/0:14,0:14:27.03:0,27,300	0/0:4,0:4:3.01:0,3,35	0/0:7,0:7:20.77:0,21,223	0/0:8,0:8:20.96:0,21,255	0/0:8,0:8:11.08:0,11,199	0/0:19,1:20:23.88:0,24,749	0/0:3,0:12:21.04:0,21,215	0/0:17,0:17:17.76:0,18,155	0/0:3,0:3:9.01:0,9,87
chr10	99864110	.	AAC	A	341.50	PASS	AB=0.913;AC=19;AF=0.365;AN=52;BaseQRankSum=1.233;DP=523;FS=0.848;HRun=0;HaplotypeScore=78.0128;InbreedingCoeff=0.0417;MQ=64.81;MQ0=7;MQRankSum=1.376;QD=1.35;ReadPosRankSum=-1.225;VQSLOD=1.5781;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:23.89:0,24,188	0/0:4,0:4:3:0,3,25	./.	./.	0/1:11,4:15:35:43,0,35	0/0:26,0:26:24.27:0,24,198	0/0:22,0:21:6.01:0,6,71	0/0:21,0:21:1.25:0,1,3	1/1:11,0:14:5.36:27,5,0	0/0:17,0:17:12.02:0,12,151	0/1:14,3:17:23.52:24,0,113	0/0:18,0:18:1.92:0,2,119	1/1:14,0:14:1.94:24,2,0	0/0:8,0:8:5.99:0,6,49	0/0:14,0:13:9.03:0,9,132	0/0:19,0:18:18.06:0,18,258	0/1:24,4:28:13.94:14,0,194	0/0:16,0:16:0.47:0,0,1	1/1:12,1:14:5.85:46,6,0	0/1:13,3:17:9.24:83,0,9	1/1:27,6:32:3:32,3,0	0/1:17,0:17:27.34:27,0,57	0/0:12,0:12:11.36:0,11,95	0/1:28,4:32:63.16:63,0,242	0/1:18,0:18:7.72:8,0,96	0/1:16,0:16:8.36:19,0,8	1/1:11,4:15:6.01:64,6,0	0/1:3,0:3:17.26:17,0,38
chr10	99864471	.	A	AATTC	7949.95	PASS	AB=0.962;AC=25;AF=0.446;AN=56;BaseQRankSum=10.379;DP=563;FS=3.297;HRun=0;HaplotypeScore=97.9900;InbreedingCoeff=0.8300;MQ=62.60;MQ0=4;MQRankSum=-10.102;QD=27.51;ReadPosRankSum=-0.740;VQSLOD=4.0676;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:26:30.07:426,30,0	0/0:6,0:6:18.06:0,18,288	1/1:23,0:17:0.47:1,0,0	0/0:7,0:5:3.01:0,3,48	0/0:22,0:22:57.13:0,57,861	1/1:11,5:15:30:551,30,0	0/0:16,0:16:33.11:0,33,528	1/1:25,1:26:18.06:414,18,0	1/1:8,10:18:36.07:751,36,0	0/0:21,0:21:36.12:0,36,576	0/0:18,0:18:27.09:0,27,432	0/0:23,0:23:48.16:0,48,763	0/0:21,0:21:48.16:0,48,767	0/0:15,0:15:24.08:0,24,384	0/0:23,0:23:27.08:0,27,409	0/1:23,1:25:17.69:18,0,730	0/0:24,0:24:44.27:0,44,669	1/1:7,3:10:9.03:211,9,0	1/1:18,5:20:21.07:473,21,0	1/1:16,15:31:63.17:1408,63,0	1/1:13,4:17:27.02:507,27,0	0/0:18,0:18:36.12:0,36,576	0/0:17,0:17:36.12:0,36,559	0/0:16,0:16:36.11:0,36,552	0/0:27,0:27:51.17:0,51,816	1/1:17,11:27:0.12:1031,0,0	1/1:17,18:35:78.22:1729,78,0	1/1:5,5:10:18.06:431,18,0
chr10	99864505	.	T	TA	6455.96	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=3.048;DP=502;FS=10.596;HRun=5;HaplotypeScore=72.8705;InbreedingCoeff=0.9683;MQ=59.68;MQ0=4;MQRankSum=-9.509;QD=31.04;ReadPosRankSum=-2.047;VQSLOD=4.1074;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,16:22:43.61:602,44,0	0/0:7,0:7:21.05:0,21,225	0/0:14,0:11:26.61:0,27,239	0/0:5,0:4:2.16:0,2,59	0/0:24,0:24:69.13:0,69,728	1/1:2,9:10:21.07:276,21,0	0/0:18,0:18:54.14:0,54,580	1/1:1,24:25:72.21:919,72,0	1/1:3,13:16:39.13:513,39,0	0/0:24,0:24:72.14:0,72,755	0/0:16,0:16:48.12:0,48,515	0/0:22,0:22:66.17:0,66,709	0/0:21,0:21:48.12:0,48,516	0/0:10,0:10:27.07:0,27,290	0/0:12,0:12:33.08:0,33,355	0/0:18,1:19:17.71:0,18,541	0/0:24,0:24:63.06:0,63,636	1/1:1,10:11:33.04:412,33,0	1/1:4,15:15:42.09:531,42,0	1/1:5,17:22:54.16:695,54,0	1/1:7,9:16:27.09:352,27,0	0/0:15,0:15:42.11:0,42,451	0/0:23,0:23:66.13:0,66,691	0/0:17,0:17:48.12:0,48,516	0/0:23,0:23:66.06:0,66,678	1/1:4,27:30:52.03:1033,52,0	1/1:4,23:27:66.17:846,66,0	1/1:0,7:7:21.07:276,21,0
chr10	99864565	.	CT	C	305.86	PASS	AB=0.950;AC=7;AF=0.130;AN=54;BaseQRankSum=6.474;DP=452;FS=0.000;HRun=11;HaplotypeScore=61.1316;InbreedingCoeff=0.5126;MQ=68.05;MQ0=0;MQRankSum=-2.751;QD=3.97;ReadPosRankSum=-1.251;VQSLOD=-0.1611;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:22:48.82:0,49,265	0/0:3,0:3:6.02:0,6,64	0/1:19,1:13:35.39:35,0,42	0/1:17,1:11:39.09:39,0,55	0/0:13,0:13:27.06:0,27,281	./.	0/0:15,0:15:33.05:0,33,334	0/0:29,2:31:22.86:0,23,635	1/1:1,6:7:14.58:108,15,0	0/0:19,0:19:42.06:0,42,428	0/0:12,0:13:29.88:0,30,287	0/0:18,0:18:39:0,39,367	0/0:14,0:14:33.06:0,33,338	0/0:9,0:9:20.95:0,21,207	0/0:18,0:18:37.85:0,38,362	0/0:9,0:9:18.03:0,18,185	0/0:29,2:32:26.54:0,27,568	1/1:2,10:12:32.55:255,33,0	0/0:15,0:15:29.99:0,30,286	0/0:16,1:17:23.32:0,23,392	0/0:13,0:14:29.86:0,30,289	0/0:13,0:13:33.07:0,33,343	0/0:18,1:19:44.94:0,45,421	0/1:17,1:19:1.55:2,0,341	0/0:23,0:24:47.95:0,48,489	0/0:26,1:27:35.71:0,36,551	0/0:18,1:19:17.46:0,17,391	0/0:7,0:7:15.04:0,15,160
chr10	99864871	.	C	CA	387.48	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.725;DP=589;FS=3.453;HRun=8;HaplotypeScore=121.3459;InbreedingCoeff=0.9229;MQ=63.62;MQ0=20;MQRankSum=-2.341;QD=13.36;ReadPosRankSum=1.296;VQSLOD=3.0569;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,14:27:21.17:480,21,0	0/0:5,0:5:12:0,12,108	0/0:43,0:15:30.33:0,30,226	0/0:44,0:18:27.27:0,27,223	0/0:25,0:24:27.46:0,27,246	0/0:19,0:19:40.20:0,40,350	0/0:17,0:17:31.83:0,32,276	0/0:26,0:24:38.99:0,39,354	0/0:17,0:16:17.61:0,18,295	0/0:21,0:20:38.97:0,39,343	0/0:19,0:18:35.97:0,36,317	0/0:16,0:16:29.94:0,30,260	0/0:17,0:17:26.16:0,26,223	0/0:12,0:12:16.98:0,17,143	0/0:24,0:24:43.61:0,44,368	0/0:20,0:20:44.95:0,45,411	0/0:26,0:25:51.89:0,52,467	0/0:21,0:21:42.65:0,43,411	0/0:31,0:29:59.93:0,60,533	0/0:21,0:22:28.82:0,29,253	0/0:15,0:15:30:0,30,274	0/0:12,0:12:29.98:0,30,265	0/0:15,0:14:23.96:0,24,212	0/0:11,0:9:14.92:0,15,137	0/0:24,0:23:38.08:0,38,341	0/0:17,0:17:32.03:0,32,277	0/0:25,0:25:45.70:0,46,386	0/0:14,0:13:21.79:0,22,183
chr10	99864968	.	TACAC	T	3051.19	PASS	AB=0.622;AC=13;AF=0.232;AN=56;BaseQRankSum=4.482;DP=645;FS=1.537;HRun=0;HaplotypeScore=125.5050;InbreedingCoeff=0.8229;MQ=54.23;MQ0=17;MQRankSum=0.149;QD=15.57;ReadPosRankSum=0.915;VQSLOD=3.4618;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:37:70.29:0,70,1157	0/0:7,0:7:9.01:0,9,170	0/0:14,0:1:2.04:0,2,6	0/0:16,0:2:2.99:0,3,24	0/0:21,0:21:42.79:0,43,823	0/0:31,0:31:67.98:0,68,1378	0/0:26,0:25:59.21:0,59,957	1/1:20,16:33:16.71:551,17,0	0/0:17,0:20:18.37:0,18,239	0/0:27,0:29:59.65:0,60,1054	0/0:18,0:18:26.83:0,27,597	0/0:13,0:13:18.04:0,18,367	0/0:19,0:20:41.28:0,41,778	0/0:15,0:15:32.48:0,32,519	0/0:25,0:25:27.09:0,27,658	0/0:20,0:21:47.86:0,48,976	0/0:33,0:32:58.71:0,59,1177	0/0:21,0:27:46.53:0,47,528	1/1:8,6:12:17.62:216,18,0	1/1:16,14:30:38.89:547,39,0	1/1:17,31:45:30.10:480,30,0	0/0:14,0:15:23.82:0,24,485	0/0:21,0:21:36.93:0,37,689	0/0:13,0:13:32.83:0,33,629	0/0:22,0:23:53.36:0,53,1035	0/1:11,17:27:36:610,0,36	1/1:5,17:23:32.85:489,33,0	1/1:1,15:15:21.07:343,21,0
chr10	99865851	.	G	GA	255.43	PASS	AB=0.979;AC=7;AF=0.130;AN=54;BaseQRankSum=1.916;DP=413;FS=3.349;HRun=10;HaplotypeScore=88.6272;InbreedingCoeff=0.1316;MQ=44.98;MQ0=16;MQRankSum=-1.644;QD=2.41;ReadPosRankSum=-1.062;VQSLOD=-0.5526;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,11:22:29.63:296,30,0	0/0:7,0:8:16.95:0,17,122	0/0:3,0:1:3:0,3,25	./.	0/0:17,0:16:23.92:0,24,192	0/0:14,0:15:16.78:0,17,117	0/0:19,0:19:26.12:0,26,219	0/0:19,0:16:17.77:0,18,147	0/1:13,0:13:13.16:13,0,100	0/0:16,0:17:25.92:0,26,202	0/0:19,0:18:8.88:0,9,74	0/0:13,0:13:20.94:0,21,172	0/0:14,0:14:19.92:0,20,153	0/1:14,0:15:48.57:49,0,100	0/0:22,0:21:26.82:0,27,221	0/1:19,1:20:0.81:1,0,195	0/0:23,0:23:23.47:0,23,196	0/0:8,0:8:16.52:0,17,127	0/1:15,1:15:8.97:9,0,252	0/0:17,0:16:14.78:0,15,123	0/0:10,0:7:2.95:0,3,21	0/0:14,0:13:8.97:0,9,73	0/1:16,0:16:10.89:11,0,77	0/0:25,0:24:16.97:0,17,147	0/0:17,0:16:23.91:0,24,194	0/0:9,0:8:14.97:0,15,123	0/0:15,0:13:11.08:0,11,97	0/0:3,0:2:2.99:0,3,25
chr10	99866081	.	G	GT	487.64	PASS	AB=0.880;AC=5;AF=0.089;AN=56;BaseQRankSum=-2.782;DP=585;FS=7.732;HRun=9;HaplotypeScore=60.8477;InbreedingCoeff=0.7773;MQ=82.65;MQ0=0;MQRankSum=-0.259;QD=10.16;ReadPosRankSum=-1.227;VQSLOD=1.7223;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:83.95:0,84,724	0/0:6,0:6:15:0,15,130	0/0:29,0:28:41.27:0,41,352	0/0:16,0:16:15.63:0,16,145	0/0:23,0:23:65.95:0,66,565	0/0:21,0:21:59.95:0,60,512	0/0:27,0:27:65.97:0,66,569	0/0:22,0:23:52.94:0,53,435	1/1:0,12:12:27.07:299,27,0	0/0:26,0:27:71.01:0,71,605	0/0:16,0:16:38.96:0,39,332	0/0:24,0:24:59.92:0,60,508	0/0:11,0:11:26.97:0,27,229	0/0:13,0:13:32.98:0,33,282	0/0:23,0:23:65.89:0,66,554	0/0:21,3:24:17.95:0,18,496	0/0:25,0:25:71.95:0,72,619	1/1:3,10:14:17.47:305,17,0	0/0:25,2:27:17.84:0,18,399	0/0:23,0:24:58.90:0,59,483	0/0:26,0:26:62.81:0,63,535	0/0:14,0:15:35.88:0,36,300	0/1:19,3:22:9.37:9,0,386	0/0:21,0:21:47.91:0,48,405	0/0:21,0:22:59.01:0,59,497	0/0:23,0:23:62.93:0,63,540	0/0:23,0:23:56.97:0,57,495	0/0:12,0:13:38.03:0,38,318
chr10	99867805	.	G	GATAA	2756.60	PASS	AC=22;AF=0.478;AN=46;BaseQRankSum=-0.808;DP=361;FS=2.616;HRun=0;HaplotypeScore=71.1157;InbreedingCoeff=0.7593;MQ=86.21;MQ0=3;MQRankSum=-0.566;QD=18.88;ReadPosRankSum=-2.030;VQSLOD=3.1018;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:30:17.85:0,18,151	0/0:8,0:8:9:0,9,116	./.	./.	0/0:10,0:10:6.02:0,6,94	1/1:13,9:23:27.09:625,27,0	0/0:6,0:6:6:0,6,71	1/1:23,0:23:18.05:306,18,0	1/1:5,1:6:3.01:71,3,0	0/0:17,0:18:21.06:0,21,307	0/0:6,0:6:6.02:0,6,94	./.	0/0:11,0:11:12.04:0,12,187	0/0:15,0:15:17.89:0,18,248	0/0:12,0:12:12.01:0,12,144	0/0:8,0:8:3.01:0,3,47	0/0:24,0:27:42.13:0,42,618	1/1:13,13:27:33.11:779,33,0	1/1:13,0:16:15.05:261,15,0	1/1:7,0:7:9.03:174,9,0	1/1:5,0:5:3.01:69,3,0	./.	0/0:11,0:10:6.02:0,6,94	./.	1/1:2,3:5:9.03:213,9,0	1/1:9,0:10:6.02:104,6,0	1/1:9,0:13:9.03:157,9,0	1/1:6,1:10:9.03:175,9,0
chr10	99868448	.	T	TA	2419.09	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.995;DP=714;FS=4.874;HRun=1;HaplotypeScore=87.7807;InbreedingCoeff=0.9936;MQ=69.48;MQ0=0;MQRankSum=-4.378;QD=39.02;ReadPosRankSum=0.760;VQSLOD=4.1332;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.26:0,87,1182	0/0:5,0:5:15.05:0,15,210	0/0:18,0:18:54.18:0,54,753	0/0:9,0:9:24.08:0,24,333	0/0:33,0:33:99:0,99,1366	1/1:2,23:25:69.22:1077,69,0	0/0:25,0:25:72.21:0,72,972	0/0:39,0:39:99:0,117,1636	1/1:1,22:23:57.19:910,57,0	0/0:33,0:33:96.32:0,96,1342	0/0:24,0:24:72.21:0,72,973	0/0:19,0:19:57.18:0,57,780	0/0:32,0:32:96.32:0,96,1341	0/0:27,0:27:81.27:0,81,1129	0/0:26,0:26:78.25:0,78,1072	0/0:46,1:47:90.66:0,91,1840	0/0:23,0:23:69.22:0,69,948	1/1:0,14:14:36.12:575,36,0	0/0:17,0:17:51.17:0,51,713	0/0:36,0:36:99:0,108,1474	0/0:21,0:21:63.17:0,63,844	0/0:24,0:24:72.24:0,72,1007	0/0:27,0:27:81.27:0,81,1133	0/0:17,0:17:48.14:0,48,651	0/0:30,0:30:87.28:0,87,1200	0/0:31,0:31:93.30:0,93,1285	0/0:43,0:43:99:0,123,1696	0/0:15,0:15:39.13:0,39,545
chr10	99868484	.	T	TGATA	831	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-0.104;DP=721;FS=6.893;HRun=0;HaplotypeScore=141.8147;InbreedingCoeff=0.6768;MQ=56.75;MQ0=0;MQRankSum=-1.920;QD=13.19;ReadPosRankSum=-1.250;VQSLOD=2.7942;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:66.23:0,66,1110	0/0:6,0:6:15.05:0,15,255	0/0:15,0:11:18.06:0,18,306	0/0:6,0:6:9.03:0,9,151	0/0:32,0:32:90.29:0,90,1500	1/1:12,16:28:30.08:673,30,0	0/0:27,0:27:51.16:0,51,839	0/0:31,0:31:57.19:0,57,944	0/1:20,0:20:7.72:52,0,8	0/0:39,0:39:99:0,102,1711	0/0:30,0:30:81.26:0,81,1339	0/0:27,0:27:66.23:0,66,1120	0/0:39,0:39:99:0,105,1781	0/0:33,0:33:84.27:0,84,1399	0/0:32,0:32:90.29:0,90,1501	0/0:36,0:36:72.25:0,72,1221	0/0:22,0:22:48.64:0,49,803	1/1:12,3:15:1.40:222,1,0	0/0:17,0:17:45.15:0,45,754	0/0:40,0:40:99:0,102,1731	0/0:17,0:18:29.64:0,30,482	0/0:27,0:27:72.23:0,72,1177	0/0:30,0:30:81.28:0,81,1364	0/0:13,0:13:24.08:0,24,407	0/0:28,0:28:69.24:0,69,1160	0/0:30,0:28:81.27:0,81,1331	0/0:35,0:35:63.19:0,63,1034	0/0:12,0:12:24.06:0,24,381
chr10	99868497	.	GATGATACATAGATGATAC	G	1065.20	PASS	AB=0.853;AC=5;AF=0.089;AN=56;BaseQRankSum=5.572;DP=723;FS=0.000;HRun=0;HaplotypeScore=325.2727;InbreedingCoeff=0.7354;MQ=56.15;MQ0=3;MQRankSum=-4.760;QD=15.44;ReadPosRankSum=0.385;VQSLOD=1.2846;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:78.11:0,78,3565	0/0:7,0:7:21.07:0,21,1677	0/0:15,0:9:24.08:0,24,528	0/0:7,0:5:9.03:0,9,151	0/0:33,0:33:99:0,99,4637	0/1:24,0:29:34.11:34,0,1901	0/0:21,0:21:60.21:0,60,2700	0/0:33,0:33:99:0,99,3056	1/1:3,11:20:12.04:623,12,0	0/0:38,0:38:99:0,111,4775	0/0:30,0:30:90.31:0,90,4559	0/0:26,0:26:75.26:0,75,4703	0/0:40,0:40:99:0,114,6623	0/0:33,0:33:96.32:0,96,5424	0/0:33,0:33:99:0,99,6407	0/0:29,0:29:78.27:0,78,3845	0/0:22,0:22:60.68:0,61,2688	1/1:4,13:20:15.05:531,15,0	0/0:19,0:17:51.17:0,51,2405	0/0:41,0:41:99:0,120,6943	0/0:17,0:17:36.06:0,36,1700	0/0:30,0:30:84.12:0,84,3846	0/0:31,0:31:90.31:0,90,5158	0/0:15,0:15:33.11:0,33,1766	0/0:25,0:25:72.25:0,72,3331	0/0:30,0:28:90.30:0,90,3488	0/0:31,0:31:69.24:0,69,3320	0/0:16,0:16:38.98:0,39,2299
chr10	99868628	.	GATAGATAGATAC	G	880.03	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.574;DP=660;FS=0.867;HRun=0;HaplotypeScore=251.2190;InbreedingCoeff=0.5796;MQ=51.75;MQ0=7;MQRankSum=-3.168;QD=26.67;ReadPosRankSum=-2.488;VQSLOD=2.6244;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:2.90:0,3,73	0/0:10,0:10:27.08:0,27,1254	0/0:11,0:2:6.01:0,6,64	0/0:7,0:2:6.02:0,6,133	0/0:16,0:16:48.15:0,48,1589	0/0:26,0:25:4.72:0,5,90	0/0:15,0:15:28.34:0,28,1033	0/0:49,0:44:99:0,117,2778	1/1:6,2:8:12.03:306,12,0	0/0:30,0:30:90.29:0,90,4086	0/0:18,0:18:54.16:0,54,2328	0/0:22,0:22:54.16:0,54,2215	0/0:46,0:46:99:0,123,4771	0/0:28,0:28:81.22:0,81,3068	0/0:35,0:35:99:0,102,4845	0/0:27,1:28:72.18:0,72,3370	0/0:26,0:26:57.20:0,57,2714	1/1:24,1:25:0.79:673,1,0	0/0:14,0:12:33.04:0,33,807	0/0:35,0:35:69.45:0,69,1337	0/0:6,0:6:3.01:0,3,115	0/0:26,0:26:69.18:0,69,2565	0/0:21,0:21:60.17:0,60,2398	0/0:14,0:14:23.47:0,23,1293	0/0:29,0:29:78.11:0,78,3618	0/0:32,0:32:90.30:0,90,2761	0/0:49,0:48:95.56:0,96,2597	0/0:7,0:7:21.05:0,21,569
chr10	99868632	.	GATAGATAC	G	438.80	PASS	AB=0.610;AC=7;AF=0.125;AN=56;BaseQRankSum=2.654;DP=646;FS=1.912;HRun=0;HaplotypeScore=206.0592;InbreedingCoeff=0.7756;MQ=51.85;MQ0=6;MQRankSum=-2.996;QD=5.29;ReadPosRankSum=-2.787;VQSLOD=2.4140;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,16:25:0.03:0,0,0	0/0:9,0:9:24.08:0,24,837	0/0:9,0:3:9:0,9,87	0/0:6,0:2:6.02:0,6,94	0/0:17,0:17:42.09:0,42,994	1/1:4,22:25:3.01:79,3,0	0/0:12,0:12:21.54:0,22,714	0/0:48,0:43:98.83:0,99,1564	1/1:8,0:8:11.92:162,12,0	0/0:33,0:33:95.85:0,96,2838	0/0:19,0:19:54.16:0,54,1650	0/0:19,0:19:51.15:0,51,1530	0/0:45,0:45:99:0,105,3129	0/0:29,0:29:75.17:0,75,2095	0/0:35,0:35:96.30:0,96,3203	0/0:29,0:29:75.12:0,75,2289	0/0:24,0:24:57.14:0,57,1774	1/1:24,0:24:24.18:324,24,0	0/0:14,0:12:24.02:0,24,438	0/0:33,0:34:57.36:0,57,762	0/0:6,0:6:3.01:0,3,71	0/0:26,0:26:60.13:0,60,1603	0/0:21,0:21:57.13:0,57,1585	0/0:14,0:14:23.36:0,23,897	0/0:29,0:29:72.09:0,72,2414	0/0:30,0:30:75.24:0,75,1817	0/0:48,0:47:89.05:0,89,1555	0/0:7,0:7:18.04:0,18,436
chr10	99868654	.	TGATA	T	5276.04	PASS	AB=0.600;AC=13;AF=0.232;AN=56;BaseQRankSum=12.989;DP=671;FS=3.424;HRun=0;HaplotypeScore=155.9570;InbreedingCoeff=0.7842;MQ=65.90;MQ0=3;MQRankSum=-10.586;QD=28.21;ReadPosRankSum=-0.034;VQSLOD=4.3364;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:9.03:0,9,231	0/0:7,0:7:21.07:0,21,545	0/0:16,0:13:39.11:0,39,942	0/0:19,0:16:48.16:0,48,1197	0/0:23,0:23:66.23:0,66,1743	0/0:29,0:29:21.06:0,21,503	0/0:12,0:12:33.58:0,34,872	1/1:10,31:37:93.25:1636,93,0	0/0:11,0:11:18.06:0,18,439	0/0:35,0:35:96.30:0,96,2479	0/0:21,0:21:57.18:0,57,1452	0/0:21,0:21:63.22:0,63,1602	0/0:46,0:46:99:0,126,3297	0/0:26,0:26:72.25:0,72,1901	0/0:37,0:37:99:0,108,2742	0/0:22,0:22:60.14:0,60,1530	0/0:24,0:24:63.22:0,63,1624	0/0:22,0:22:57.17:0,57,1434	1/1:3,11:14:2.70:518,3,0	1/1:2,18:37:1.91:592,2,0	1/1:1,4:6:3.01:55,3,0	0/0:27,0:27:81.26:0,81,2052	0/0:18,0:18:42.14:0,42,1077	0/0:17,0:17:30.08:0,30,727	0/0:23,0:23:54.19:0,54,1395	0/1:1,18:27:6.64:954,0,7	1/1:5,25:50:18:1224,18,0	1/1:0,7:10:21.53:297,22,0
chr10	99868657	.	TA	T	1249.95	PASS	AB=0.885;AC=10;AF=0.179;AN=56;BaseQRankSum=14.211;DP=665;FS=3.961;HRun=1;HaplotypeScore=133.4310;InbreedingCoeff=0.4951;MQ=70.19;MQ0=1;MQRankSum=-11.241;QD=6.98;ReadPosRankSum=-0.079;VQSLOD=0.5648;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:9.03:0,9,144	0/0:7,0:7:21.07:0,21,336	0/0:19,0:15:45:0,45,662	0/0:23,0:20:60.17:0,60,914	0/0:22,0:22:66.23:0,66,1055	0/0:29,0:29:24.08:0,24,380	0/0:13,0:13:37.01:0,37,575	0/1:38,0:34:31.88:224,0,32	0/0:11,0:11:18.06:0,18,287	0/0:35,0:35:99:0,105,1675	0/0:20,0:20:57.19:0,57,911	0/0:21,0:21:63.21:0,63,1007	0/0:47,0:47:99:0,138,2128	0/0:27,0:27:81.24:0,81,1226	0/0:38,0:38:99:0,114,1799	0/0:22,0:22:63.21:0,63,1003	0/0:23,0:23:63.21:0,63,999	0/0:21,0:21:57.17:0,57,884	0/1:12,0:12:2.68:128,0,3	0/1:23,13:36:52.35:117,0,52	1/1:6,0:6:2.37:8,2,0	0/0:27,0:27:81.28:0,81,1294	0/0:19,0:19:54.17:0,54,830	0/0:16,0:16:29.62:0,30,479	0/0:20,0:20:57.19:0,57,907	1/1:20,7:27:23.55:468,24,0	0/1:38,12:49:59.17:325,0,59	1/1:7,3:10:20.88:132,21,0
chr10	99869194	.	C	CG	7897.60	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-13.431;DP=644;FS=1.026;HRun=1;HaplotypeScore=64.3412;InbreedingCoeff=0.9849;MQ=84.57;MQ0=0;MQRankSum=-3.092;QD=39.69;ReadPosRankSum=1.275;VQSLOD=5.4885;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:36:99:1480,99,0	0/0:5,0:5:15.05:0,15,194	0/0:21,0:20:54.35:0,54,611	0/0:24,0:24:58.33:0,58,705	0/0:16,0:16:45.14:0,45,576	0/0:10,0:10:30.01:0,30,351	0/0:29,0:29:78.20:0,78,978	1/1:2,23:25:66.21:967,66,0	0/0:26,0:26:78.25:0,78,1010	0/0:25,0:25:69.21:0,69,872	0/0:6,0:6:15.05:0,15,194	0/0:30,0:30:90.28:0,90,1150	0/0:33,0:33:96.31:0,96,1238	0/0:31,0:31:84.26:0,84,1073	0/0:23,0:23:69.22:0,69,894	0/0:19,0:19:57.19:0,57,739	0/0:36,0:36:99:0,105,1296	0/0:35,0:35:99:0,102,1277	1/1:2,20:22:63.19:902,63,0	1/1:0,17:17:48.16:717,48,0	1/1:1,44:45:99:1704,114,0	0/0:20,0:20:59.97:0,60,726	0/0:17,0:17:51.13:0,51,620	0/0:27,0:27:75.20:0,75,953	0/0:12,0:12:27.09:0,27,349	1/1:2,15:17:9.15:605,9,0	1/1:1,18:19:47.92:715,48,0	1/1:0,18:18:54.18:807,54,0
chr10	99869682	.	GA	G	1215.91	PASS	AB=0.625;AC=19;AF=0.339;AN=56;BaseQRankSum=5.549;DP=544;FS=0.426;HRun=14;HaplotypeScore=62.6395;InbreedingCoeff=0.6249;MQ=54.33;MQ0=16;MQRankSum=0.996;QD=5.60;ReadPosRankSum=2.145;VQSLOD=2.2688;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,18:29:14.82:191,0,15	0/0:11,0:11:23.94:0,24,206	0/0:15,0:6:8.68:0,9,63	0/0:9,0:7:6.48:0,6,63	0/0:24,0:25:45.89:0,46,381	1/1:8,0:19:21.42:61,21,0	0/0:24,0:22:6.23:0,6,277	1/1:9,18:27:47.19:316,47,0	1/1:3,0:10:10.18:29,10,0	0/0:11,0:10:20.97:0,21,183	0/0:14,0:15:16.45:0,16,175	0/0:17,0:17:29.81:0,30,252	0/0:17,0:16:31.09:0,31,254	0/0:13,0:14:4.04:0,4,138	0/0:19,0:18:32.94:0,33,289	0/0:13,0:15:21.24:0,21,278	0/0:39,0:40:41.02:0,41,555	1/1:6,0:20:22.40:64,22,0	1/1:9,10:19:9.06:155,9,0	0/1:14,13:28:13.43:183,0,13	1/1:9,3:10:10.90:67,11,0	0/0:20,1:21:15.43:0,15,277	0/0:11,1:11:4.68:0,5,174	0/0:36,2:35:9.13:0,9,349	0/0:22,0:21:41.96:0,42,365	1/1:5,10:14:14.92:188,15,0	0/1:7,15:22:21.70:135,0,22	1/1:7,0:3:2.96:20,3,0
chr10	99870484	.	T	TTGTGTGTGTTGTGGTGTG	7806.46	PASS	AB=0.988;AC=20;AF=0.357;AN=56;BaseQRankSum=2.699;DP=629;FS=12.334;HRun=0;HaplotypeScore=269.2350;InbreedingCoeff=0.6668;MQ=68.53;MQ0=6;MQRankSum=-9.332;QD=28.18;ReadPosRankSum=-5.330;VQSLOD=1.5945;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,12:31:24.01:1131,24,0	0/0:8,0:8:18.03:0,18,459	0/0:27,0:18:35.99:0,36,596	0/0:26,0:17:41.93:0,42,756	0/0:26,0:27:60.20:0,60,1865	1/1:32,0:32:38.36:607,38,0	0/0:16,0:17:29.91:0,30,855	1/1:37,0:33:73.12:1839,73,0	1/1:22,0:22:15.05:611,15,0	0/0:37,0:39:93.30:0,93,2178	0/0:17,0:17:45.15:0,45,1283	0/0:20,0:20:42.14:0,42,1390	0/0:19,0:20:38.26:0,38,1170	0/0:16,0:19:42.14:0,42,1318	0/0:21,0:21:54.19:0,54,1355	0/0:28,0:30:65.65:0,66,1866	0/0:35,0:35:88.67:0,89,2679	1/1:17,0:17:21.96:660,22,0	0/1:15,0:15:25.65:632,0,26	1/1:14,0:14:25:403,25,0	0/1:24,0:23:57.02:346,0,57	0/0:14,0:14:27.09:0,27,1069	0/0:16,0:17:39.12:0,39,971	0/1:18,0:20:99:144,0,1511	0/0:15,0:15:36.10:0,36,1119	0/1:23,0:23:73.30:920,0,73	1/1:36,0:34:34.15:451,34,0	1/1:4,0:3:5.99:63,6,0
chr10	99870485	.	T	TGTGTGTGTTGTG	9018.86	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=2.968;DP=662;FS=16.514;HRun=0;HaplotypeScore=222.7355;InbreedingCoeff=0.5928;MQ=66.76;MQ0=6;MQRankSum=-9.909;QD=31.42;ReadPosRankSum=-4.192;VQSLOD=2.4697;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:27:5.12:746,5,0	0/0:8,0:8:18.05:0,18,415	0/0:27,0:18:35.99:0,36,597	0/0:27,0:18:41.93:0,42,756	0/0:27,0:27:66.17:0,66,1614	0/1:35,0:35:2.57:403,0,3	0/0:18,0:18:30.07:0,30,719	1/1:38,0:34:75.98:1918,76,0	1/1:9,15:26:24.01:1260,24,0	0/0:40,0:40:99:0,99,2057	0/0:18,0:18:45.13:0,45,1116	0/0:21,0:21:45.14:0,45,1178	0/0:22,0:22:36.59:0,37,960	0/0:21,0:21:42.14:0,42,1132	0/0:24,0:24:54.66:0,55,1247	0/0:31,0:31:66.10:0,66,1628	0/0:42,0:42:91.50:0,92,2326	1/1:19,0:19:23.14:876,23,0	0/1:16,0:16:23.11:709,0,23	1/1:15,0:15:28.03:489,28,0	0/1:26,0:25:41.65:353,0,42	0/0:14,0:14:30.09:0,30,866	0/0:19,0:19:42.11:0,42,886	0/1:20,0:20:99:103,0,1303	0/0:16,0:16:36.10:0,36,943	0/1:24,0:24:67.40:1126,0,67	1/1:36,0:34:36.55:920,37,0	1/1:4,0:3:6.02:116,6,0
chr10	99870489	.	T	TGTGTTGTG	9427.99	PASS	AB=0.885;AC=16;AF=0.286;AN=56;BaseQRankSum=1.287;DP=667;FS=24.009;HRun=0;HaplotypeScore=177.1177;InbreedingCoeff=0.2843;MQ=62.80;MQ0=8;MQRankSum=-9.003;QD=31.85;ReadPosRankSum=-2.110;VQSLOD=2.7352;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:25:23.87:457,0,24	0/0:8,0:8:18.05:0,18,398	0/0:25,0:15:35.99:0,36,597	0/0:28,0:17:47.95:0,48,851	0/0:25,0:25:72.25:0,72,1578	0/1:35,0:35:99:288,0,156	0/0:19,0:19:37.50:0,38,758	1/1:39,0:35:86.32:2103,86,0	0/1:24,0:24:70.43:725,0,70	0/0:42,0:42:99:0,115,2186	0/0:17,0:17:48.16:0,48,1066	0/0:20,0:20:51.17:0,51,1126	0/0:22,0:22:45.14:0,45,932	0/0:20,0:20:51.17:0,51,1106	0/0:24,0:24:63.17:0,63,1256	0/0:30,0:30:78.20:0,78,1580	0/0:42,0:42:99:0,113,2312	0/1:22,0:22:34.16:625,0,34	0/1:4,7:19:11.40:973,0,11	1/1:5,10:19:35.99:626,36,0	0/1:23,0:24:48.28:393,0,48	0/0:14,0:14:30.10:0,30,713	0/0:19,0:19:45.14:0,45,893	0/1:20,0:20:51.14:51,0,1179	0/0:16,0:16:39.58:0,40,851	0/1:6,16:29:58.37:1525,0,58	1/1:2,25:31:36.57:1450,37,0	1/1:1,1:4:6.02:211,6,0
chr10	99870493	.	T	TTGTG	5051.80	PASS	AB=0.906;AC=13;AF=0.232;AN=56;BaseQRankSum=5.097;DP=641;FS=23.820;HRun=0;HaplotypeScore=120.3870;InbreedingCoeff=-0.0096;MQ=60.30;MQ0=8;MQRankSum=-9.735;QD=19.66;ReadPosRankSum=2.410;VQSLOD=2.5694;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:23:53.72:70,0,54	0/0:8,0:8:18.05:0,18,338	0/0:24,0:14:42:0,42,672	0/0:28,0:17:50.96:0,51,919	0/0:26,0:26:75.26:0,75,1476	0/1:13,22:35:99:247,0,250	0/0:17,0:17:45.12:0,45,808	0/1:15,4:34:99:1531,0,140	0/1:24,0:24:99:251,0,239	0/0:39,0:39:99:0,115,2194	0/0:17,0:17:48.01:0,48,1000	0/0:22,0:22:51.18:0,51,1062	0/0:20,0:20:45.15:0,45,892	0/0:18,0:18:51.17:0,51,1015	0/0:23,0:23:60.21:0,60,1232	0/0:29,0:29:78.25:0,78,1518	0/0:41,0:41:99:0,114,2312	0/1:12,10:23:99:298,0,314	0/1:13,0:13:98.49:450,0,98	0/1:16,0:16:43.23:356,0,43	0/1:20,1:25:99:315,0,180	0/0:14,0:14:36.11:0,36,688	0/0:20,0:20:51.17:0,51,968	0/0:22,0:22:3.96:0,4,1093	0/0:16,0:16:44.98:0,45,845	0/1:25,0:25:99:796,0,211	1/1:29,0:27:2.06:672,2,0	1/1:4,0:3:5.38:67,5,0
chr10	99870740	.	AT	A	4730.76	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.335;DP=580;FS=8.726;HRun=9;HaplotypeScore=66.7069;InbreedingCoeff=0.9961;MQ=70.18;MQ0=0;MQRankSum=-3.091;QD=22.11;ReadPosRankSum=0.756;VQSLOD=5.5337;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.18:0,66,750	0/0:11,0:11:30.07:0,30,335	0/0:15,0:15:36.04:0,36,387	0/0:11,0:10:23.74:0,24,247	0/0:19,0:19:54.14:0,54,606	1/1:4,21:25:60.03:549,60,0	0/0:20,0:20:54.16:0,54,622	1/1:8,30:38:90.04:823,90,0	1/1:1,15:16:33.02:302,33,0	0/0:33,0:33:84.23:0,84,947	0/0:19,0:19:57.17:0,57,658	0/0:19,0:19:52.40:0,52,591	0/0:19,0:19:49.03:0,49,556	0/0:18,0:18:51.15:0,51,587	0/0:23,0:23:66.20:0,66,762	0/0:24,0:24:66.20:0,66,762	0/0:24,0:24:63.17:0,63,717	1/1:1,15:16:42.02:384,42,0	1/1:2,16:18:48.02:439,48,0	1/1:6,18:24:54.02:494,54,0	1/1:3,12:15:36.01:330,36,0	0/0:19,0:19:51.14:0,51,580	0/0:24,0:24:60.18:0,60,692	0/0:20,0:20:54.16:0,54,623	0/0:24,0:24:66.19:0,66,753	1/1:4,15:19:13.40:377,13,0	1/1:1,17:18:51.03:467,51,0	1/1:3,22:25:62.96:566,63,0
chr10	99872800	.	CT	C	2930.76	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.096;DP=696;FS=0.392;HRun=7;HaplotypeScore=64.7437;InbreedingCoeff=0.9975;MQ=78.05;MQ0=0;MQRankSum=0.333;QD=23.64;ReadPosRankSum=2.011;VQSLOD=3.8350;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,33:37:87.20:888,87,0	0/0:11,0:11:33.11:0,33,415	0/0:17,0:17:51.14:0,51,606	0/0:14,0:13:17.66:0,18,257	0/0:22,0:22:60.19:0,60,755	1/1:2,25:27:72.16:735,72,0	0/0:28,0:28:75.24:0,75,944	0/0:31,0:31:75.20:0,75,919	1/1:4,28:32:69.11:704,69,0	0/0:27,0:27:78.25:0,78,981	0/0:20,0:20:48.15:0,48,604	0/0:28,0:28:84.27:0,84,1056	0/0:24,0:24:66.19:0,66,815	0/0:23,0:23:57.07:0,57,684	0/0:29,0:29:81.26:0,81,1013	0/0:23,0:23:66.21:0,66,830	0/0:36,0:36:99:0,105,1320	1/1:1,27:28:75.17:765,75,0	0/0:20,0:20:51.14:0,51,617	0/0:28,0:28:75.23:0,75,930	0/0:22,0:22:66.20:0,66,817	0/0:26,0:26:78.25:0,78,979	0/0:22,0:22:57.18:0,57,717	0/0:21,0:21:63.19:0,63,778	0/0:24,0:24:66.21:0,66,827	0/0:26,0:26:69.21:0,69,852	0/0:34,0:34:90.28:0,90,1119	0/0:16,0:16:48.11:0,48,564
chr10	99873413	.	T	TA	3662.53	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-7.122;DP=551;FS=10.605;HRun=9;HaplotypeScore=59.6930;InbreedingCoeff=0.9649;MQ=65.03;MQ0=0;MQRankSum=-1.311;QD=26.54;ReadPosRankSum=-0.796;VQSLOD=3.4643;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:74.94:0,75,643	0/0:9,0:9:26.99:0,27,234	0/0:7,0:7:17.98:0,18,151	0/0:12,0:12:28.26:0,28,223	0/0:26,0:27:77.02:0,77,657	0/0:26,0:26:65.92:0,66,564	0/0:18,0:18:50.96:0,51,439	1/1:7,22:29:66.15:713,66,0	0/0:17,0:17:44.99:0,45,390	0/0:30,1:31:47.87:0,48,644	0/0:21,0:21:59.99:0,60,521	0/0:18,0:18:50.99:0,51,443	0/0:15,0:15:44.96:0,45,383	0/0:23,0:23:59.97:0,60,517	0/0:16,0:16:44.99:0,45,391	0/0:14,0:14:38.99:0,39,339	0/0:34,0:34:92.97:0,93,807	0/0:15,0:15:41.96:0,42,358	1/1:4,18:22:54.13:587,54,0	1/1:3,9:12:27.07:299,27,0	1/1:3,19:22:57.15:631,57,0	0/0:6,0:6:11.99:0,12,104	0/0:15,0:15:37.52:0,38,310	0/0:28,0:28:77.96:0,78,672	0/0:31,0:31:83.97:0,84,727	1/1:2,21:23:63.17:697,63,0	1/1:3,16:19:42.11:464,42,0	1/1:1,10:11:4.03:273,4,0
chr10	99874171	.	TC	T	1322.67	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.797;DP=559;FS=2.376;HRun=9;HaplotypeScore=76.8678;InbreedingCoeff=0.9093;MQ=88.56;MQ0=2;MQRankSum=-4.163;QD=16.53;ReadPosRankSum=3.419;VQSLOD=4.0868;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,28:32:60.02:549,60,0	0/0:9,0:9:21.04:0,21,229	0/0:40,0:33:54.37:0,54,543	0/0:32,0:29:10.23:0,10,242	0/0:15,1:16:11.65:0,12,388	1/1:0,12:12:27.01:247,27,0	0/0:19,0:19:42.11:0,42,474	0/0:15,0:27:25.65:0,26,133	1/1:7,13:20:36.01:329,36,0	0/0:19,0:19:48.13:0,48,542	0/0:11,0:11:21.52:0,22,233	0/0:18,1:19:23.94:0,24,476	0/0:23,0:23:63.16:0,63,699	0/0:21,0:21:51.12:0,51,558	0/0:25,0:25:66.14:0,66,729	0/0:14,0:14:39.09:0,39,431	0/0:28,0:28:75.17:0,75,832	1/1:3,13:16:39.02:357,39,0	0/0:7,0:16:20.04:0,20,111	0/0:7,0:19:40.67:0,41,244	0/0:5,0:11:8.49:0,8,43	0/0:19,0:19:48.11:0,48,534	0/0:14,0:14:36.08:0,36,395	0/0:29,0:29:75.05:0,75,822	0/0:29,0:29:84.17:0,84,908	0/0:8,0:18:24.08:0,24,217	0/0:3,0:18:16.91:0,17,86	0/0:0,0:2:2.84:0,3,14
chr10	99874357	.	T	TG	593.64	PASS	AB=0.864;AC=15;AF=0.268;AN=56;BaseQRankSum=2.098;DP=569;FS=0.626;HRun=11;HaplotypeScore=104.7914;InbreedingCoeff=0.1347;MQ=74.36;MQ0=0;MQRankSum=0.073;QD=3.00;ReadPosRankSum=-3.795;VQSLOD=-0.3830;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:30:22.37:0,22,152	0/0:5,0:5:11.89:0,12,86	0/0:16,0:16:3.88:0,4,76	0/1:15,0:13:0.77:1,0,34	0/0:24,0:29:41.26:0,41,261	1/1:9,0:9:8.84:59,9,0	0/0:24,0:28:43.82:0,44,331	0/1:12,2:14:21.67:22,0,33	1/1:11,4:15:2.31:136,2,0	0/0:21,0:24:25.36:0,25,173	0/0:9,1:10:5.70:0,6,46	0/0:22,0:23:33.06:0,33,240	0/0:17,0:19:30.92:0,31,218	0/0:30,2:32:29.27:0,29,393	0/0:24,0:25:43.82:0,44,326	0/0:28,0:30:46.14:0,46,332	0/0:36,0:38:63.32:0,63,467	0/1:21,2:23:44.49:143,0,44	0/1:10,2:12:15.18:23,0,15	0/1:14,7:21:26.46:49,0,26	0/1:23,7:30:8.10:107,0,8	0/0:22,0:24:33.70:0,34,238	0/0:8,0:9:5.92:0,6,43	0/0:25,0:27:48.83:0,49,356	0/1:13,1:16:1.52:2,0,129	0/1:9,6:15:5.20:133,0,5	1/1:16,2:18:2.97:45,3,0	0/1:9,1:10:16.34:26,0,16
chr10	99874376	.	T	TG	2308.47	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-4.199;DP=492;FS=0.000;HRun=1;HaplotypeScore=62.9515;InbreedingCoeff=0.9838;MQ=89.74;MQ0=0;MQRankSum=-3.897;QD=29.98;ReadPosRankSum=-0.141;VQSLOD=3.1282;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:34:72.20:1054,72,0	0/0:7,0:7:18.06:0,18,234	0/0:25,0:24:51.44:0,51,730	0/0:21,1:20:30.49:0,30,427	0/0:17,0:17:45.15:0,45,583	1/1:0,8:8:21.07:315,21,0	0/0:30,0:30:72.23:0,72,932	0/0:11,0:11:27.09:0,27,350	1/1:1,16:17:30.10:450,30,0	0/0:13,0:13:36.12:0,36,467	0/0:4,0:4:12.04:0,12,156	0/0:19,0:19:54.17:0,54,688	0/0:15,0:15:39.12:0,39,500	0/0:28,0:28:81.26:0,81,1049	0/0:22,0:22:60.19:0,60,776	0/0:25,0:25:69.22:0,69,890	0/0:34,0:34:96.28:0,96,1212	1/1:3,14:17:45.13:650,45,0	0/0:13,0:13:36.12:0,36,464	0/0:12,0:12:27.09:0,27,349	0/0:27,0:27:68.89:0,69,892	0/0:15,0:15:45.14:0,45,570	0/0:7,0:7:18.06:0,18,227	0/0:23,0:23:69.21:0,69,878	0/0:16,0:16:42.14:0,42,544	0/0:12,0:12:36.12:0,36,466	0/0:11,0:11:33.11:0,33,423	0/0:7,0:7:21.07:0,21,272
chr10	99875334	.	CGTGTCTGTGT	C	621.02	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=1.955;DP=606;FS=0.721;HRun=0;HaplotypeScore=165.6421;InbreedingCoeff=0.6652;MQ=75.81;MQ0=2;MQRankSum=-0.498;QD=11.09;ReadPosRankSum=0.860;VQSLOD=2.7879;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:99:131,0,166	0/0:9,0:9:23.99:0,24,546	0/0:35,0:21:5.20:0,5,473	0/0:37,0:28:37.27:0,37,458	0/0:17,0:16:29.99:0,30,826	1/1:1,13:15:12.04:369,12,0	0/0:40,0:40:95.93:0,96,2654	0/0:29,0:29:72.92:0,73,918	0/0:13,0:17:7.79:0,8,84	0/0:21,0:21:62.76:0,63,1237	0/0:8,0:8:17.41:0,17,476	0/0:26,0:26:68.99:0,69,1527	0/0:14,0:14:36.02:0,36,1080	0/0:22,0:22:47.43:0,47,1455	0/0:20,0:20:42.54:0,43,1403	0/0:19,0:18:48.56:0,49,1462	0/0:35,0:35:90.96:0,91,2809	1/1:17,0:20:8.63:239,9,0	0/0:12,0:12:33.61:0,34,335	0/0:11,0:10:26.95:0,27,468	0/0:58,0:57:99:0,113,1860	0/0:12,0:12:33.04:0,33,759	0/0:9,0:9:24.02:0,24,558	0/0:39,0:39:98.51:0,99,3119	0/0:17,0:17:39.12:0,39,1510	0/0:16,0:16:39.11:0,39,1024	0/0:13,0:13:26.95:0,27,451	0/0:14,0:14:32.96:0,33,689
chr10	99875335	.	GTGTC	G	1076.55	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=4.347;DP=624;FS=2.399;HRun=0;HaplotypeScore=102.7268;InbreedingCoeff=0.6842;MQ=73.99;MQ0=2;MQRankSum=-2.888;QD=9.88;ReadPosRankSum=1.653;VQSLOD=2.9023;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:21,3:24:44.94:476,45,0	0/0:11,0:11:29.93:0,30,360	0/0:34,0:20:4.82:0,5,358	0/0:36,0:27:37.27:0,37,429	0/0:17,0:16:29.26:0,29,444	1/1:15,0:15:12.04:143,12,0	0/0:40,0:40:72.87:0,73,1308	0/0:28,0:28:70.25:0,70,617	1/1:5,12:17:12.04:186,12,0	0/0:22,0:22:42.77:0,43,651	0/0:8,0:8:17.31:0,17,223	0/0:26,0:26:45.93:0,46,787	0/0:14,0:14:35.98:0,36,543	0/0:23,0:23:50.39:0,50,799	0/0:21,0:21:45.54:0,46,830	0/0:19,0:18:18.73:0,19,744	0/0:37,0:37:71.44:0,71,1393	1/1:20,0:20:44.93:398,45,0	0/0:15,0:15:24.76:0,25,256	0/0:12,0:11:3.67:0,4,163	0/0:62,0:61:54.01:0,54,819	0/0:13,0:13:35.37:0,35,453	0/0:9,0:9:24:0,24,307	0/0:39,0:39:74.22:0,74,1692	0/1:18,0:18:17.42:17,0,694	0/0:16,0:16:30.76:0,31,299	0/0:13,0:13:26.91:0,27,256	0/1:15,0:15:20.61:21,0,195
chr10	99875339	.	CTG	C	985.41	PASS	AB=0.896;AC=25;AF=0.463;AN=54;BaseQRankSum=8.471;DP=630;FS=0.000;HRun=0;HaplotypeScore=83.0162;InbreedingCoeff=-0.3592;MQ=69.14;MQ0=3;MQRankSum=0.847;QD=2.13;ReadPosRankSum=2.271;VQSLOD=1.0972;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:13.43:16,0,13	0/1:10,0:11:5.70:6,0,129	0/0:32,0:18:3.01:0,3,42	./.	0/1:17,0:16:39.08:39,0,158	1/1:14,0:14:11.36:55,11,0	0/0:32,6:40:0.94:0,1,537	0/1:22,3:25:5.62:78,0,6	0/1:18,0:18:8.99:35,0,9	0/1:22,1:24:24.23:24,0,131	0/1:7,1:8:21.14:21,0,93	0/1:26,1:27:14.15:14,0,267	0/1:14,1:15:12:12,0,198	0/1:18,4:22:30.06:30,0,343	0/0:18,0:18:1.84:0,2,371	0/1:18,0:18:41.67:42,0,265	0/1:32,6:39:23.65:24,0,584	0/1:21,0:21:27.26:27,0,29	1/1:16,0:16:0.44:8,0,0	0/1:7,4:11:3.11:98,0,3	1/1:44,18:63:0.67:170,1,0	0/0:14,0:14:7.47:0,7,187	0/0:11,0:11:12.02:0,12,151	0/1:37,1:41:16.65:17,0,732	0/0:20,0:21:31.60:0,32,431	0/1:7,8:15:32.90:202,0,33	0/1:8,4:12:35.89:57,0,36	1/1:4,8:15:17.71:160,18,0
chr10	99875793	.	GCCAA	G	630.95	PASS	AB=0.963;AC=11;AF=0.212;AN=52;BaseQRankSum=4.138;DP=783;FS=1.571;HRun=0;HaplotypeScore=93.2571;InbreedingCoeff=0.3788;MQ=36.67;MQ0=179;MQRankSum=-6.490;QD=2.84;ReadPosRankSum=-2.022;VQSLOD=1.7056;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:18:12.96:0,13,115	0/0:6,0:5:9.03:0,9,221	./.	./.	0/0:13,0:10:18.25:0,18,275	0/0:26,0:15:5.82:0,6,75	0/0:38,0:27:51.17:0,51,967	1/1:21,0:8:8.09:79,8,0	0/0:30,0:15:6.02:0,6,103	0/0:29,0:19:46.93:0,47,688	0/0:5,0:5:8.95:0,9,143	0/0:42,0:29:58.83:0,59,1003	0/0:32,0:27:62.86:0,63,1114	0/0:30,0:24:24.08:0,24,548	0/0:24,0:19:39.12:0,39,725	0/0:23,0:20:41.70:0,42,697	0/0:58,0:46:99:0,103,2056	0/1:38,0:18:43.74:44,0,160	0/1:28,1:14:21.46:148,0,21	1/1:9,0:5:5.87:55,6,0	0/1:65,1:28:4.28:104,0,4	0/0:22,0:12:20.77:0,21,232	0/0:15,0:8:12.47:0,12,184	0/0:73,0:44:99:0,101,1745	0/0:11,0:6:9.02:0,9,151	0/1:27,1:16:17.03:185,0,17	1/1:20,2:8:3.39:113,3,0	0/1:8,1:4:0.14:47,0,0
chr10	99875858	.	CCAACCAACCAGT	C	1113.59	PASS	AB=1.000;AC=16;AF=0.296;AN=54;BaseQRankSum=7.660;DP=554;FS=4.621;HRun=0;HaplotypeScore=127.8733;InbreedingCoeff=0.6041;MQ=44.08;MQ0=52;MQRankSum=-7.677;QD=7.47;ReadPosRankSum=-2.548;VQSLOD=1.6110;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:10:2.01:2,0,122	0/0:7,0:7:20.96:0,21,529	0/0:38,0:6:15.04:0,15,321	0/0:30,0:2:5.69:0,6,60	0/0:9,0:7:18.06:0,18,503	./.	0/0:27,0:25:67.11:0,67,1889	1/1:9,6:9:12.03:151,12,0	0/1:13,0:8:11.02:11,0,22	0/0:22,0:19:43.66:0,44,1234	0/0:15,0:12:12:0,12,280	0/0:22,0:18:34.30:0,34,1188	0/0:21,0:20:41.97:0,42,1344	0/0:11,0:11:30.10:0,30,918	0/0:20,0:19:47.82:0,48,1557	0/0:26,0:23:47.85:0,48,1700	0/0:47,0:43:99:0,105,3454	0/1:17,0:8:9.49:11,0,9	1/1:11,0:5:6.02:73,6,0	1/1:10,1:8:12.51:236,13,0	1/1:33,1:19:12.71:214,13,0	0/0:21,0:16:30.10:0,30,876	0/0:13,0:12:18.06:0,18,500	0/0:59,0:51:99:0,135,4673	0/0:14,0:12:27.02:0,27,518	0/1:16,0:10:90.11:238,0,90	1/1:3,1:3:6.02:139,6,0	1/1:5,1:6:12.01:214,12,0
chr10	99875905	.	G	GCCAA	3037.44	PASS	AB=0.770;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.275;DP=726;FS=8.098;HRun=0;HaplotypeScore=112.2320;InbreedingCoeff=0.6626;MQ=49.21;MQ0=49;MQRankSum=-4.424;QD=13.32;ReadPosRankSum=-4.236;VQSLOD=1.3401;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:26:31.15:75,0,31	0/0:11,0:11:24.08:0,24,382	1/1:40,0:7:6.67:21,7,0	0/0:21,0:8:17.95:0,18,196	0/0:20,0:20:39.02:0,39,483	0/0:2,0:8:4.71:0,5,21	0/0:37,0:36:63.17:0,63,914	1/1:19,0:13:6:94,6,0	0/0:27,0:21:45:0,45,629	0/0:33,0:30:60.13:0,60,842	0/0:19,0:18:41.90:0,42,454	0/0:33,0:33:69.21:0,69,1053	0/0:25,0:25:39.08:0,39,550	0/0:27,0:26:53.97:0,54,765	0/0:27,0:27:57.15:0,57,836	0/0:25,0:25:45.10:0,45,634	0/0:36,0:33:60.12:0,60,890	0/0:24,0:19:47.92:0,48,718	1/1:13,8:10:18.06:376,18,0	1/1:8,15:26:22.03:658,22,0	1/1:14,25:33:30.10:704,30,0	0/0:28,0:27:47.98:0,48,611	0/0:23,0:23:39.02:0,39,517	0/0:56,0:50:96.30:0,96,1460	0/0:16,0:16:39.10:0,39,554	0/1:8,12:20:53.57:601,0,54	1/1:5,8:11:18.53:425,19,0	0/1:4,4:9:41.21:267,0,41
chr10	99876936	.	CT	C	4051.43	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.804;DP=673;FS=7.664;HRun=2;HaplotypeScore=62.1486;InbreedingCoeff=0.9551;MQ=75.43;MQ0=0;MQRankSum=-3.999;QD=37.51;ReadPosRankSum=1.130;VQSLOD=4.1417;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,55:55:99:2104,163,0	0/0:14,0:14:42.13:0,42,611	0/0:12,0:12:33.11:0,33,476	0/0:19,0:19:46.91:0,47,644	0/0:28,0:28:84.27:0,84,1219	1/1:0,14:14:36.12:468,36,0	0/0:18,0:18:54.16:0,54,787	0/0:30,0:30:90.30:0,90,1332	1/1:0,21:21:63.20:818,63,0	0/0:32,0:32:93.28:0,93,1370	0/0:16,0:16:45.14:0,45,657	0/0:24,0:24:72.24:0,72,1079	0/0:28,0:28:84.28:0,84,1259	0/0:31,0:31:93.32:0,93,1393	0/0:30,0:30:90.30:0,90,1347	0/0:22,1:23:30.28:0,30,950	0/0:25,2:27:3.35:0,3,1023	1/1:0,18:18:51.17:662,51,0	0/0:18,0:18:51.16:0,51,740	0/0:23,0:23:69.22:0,69,1008	0/0:29,0:29:87.27:0,87,1265	0/0:27,0:27:81.26:0,81,1173	0/0:16,0:16:45.15:0,45,672	0/0:34,0:34:99:0,102,1526	0/0:25,0:25:72.23:0,72,1060	0/0:20,0:20:60.18:0,60,847	0/0:28,0:28:84.28:0,84,1259	0/0:13,0:13:36.12:0,36,540
chr10	99877766	.	CCT	C	7418.78	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=12.173;DP=885;FS=0.663;HRun=0;HaplotypeScore=107.6419;InbreedingCoeff=0.9960;MQ=65.72;MQ0=23;MQRankSum=0.305;QD=24.01;ReadPosRankSum=2.494;VQSLOD=5.6978;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,37:43:87.28:1098,87,0	0/0:11,0:11:33.11:0,33,540	0/0:89,1:31:14.35:0,14,423	0/0:109,2:25:22.89:0,23,204	0/0:29,0:29:38.39:0,38,1105	1/1:4,29:33:66.21:832,66,0	0/0:30,0:30:69.22:0,69,1096	1/1:12,32:44:96.23:1158,96,0	1/1:4,19:23:36.10:454,36,0	0/0:28,1:29:31.35:0,31,1031	0/0:19,0:19:51.13:0,51,769	0/0:25,0:25:66.18:0,66,1004	0/0:29,0:29:81.20:0,81,1211	0/0:22,0:22:50.91:0,51,804	0/0:25,1:26:34.39:0,34,1075	0/0:26,0:26:69.23:0,69,1122	0/0:33,0:34:67:0,67,1517	1/1:1,22:22:33.11:416,33,0	1/1:14,17:31:51.16:639,51,0	1/1:3,21:24:39.08:472,39,0	1/1:3,25:27:63.20:795,63,0	0/0:14,0:14:33.11:0,33,530	0/0:23,0:23:60.19:0,60,964	0/0:35,0:35:80.12:0,80,1473	0/0:20,0:21:28.57:0,29,744	1/1:2,22:24:66.18:796,66,0	1/1:5,20:25:39.12:492,39,0	1/1:1,10:11:21.07:265,21,0
chr10	99878819	.	T	TCTAGAG	15628.26	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-7.268;DP=492;FS=1.635;HRun=0;HaplotypeScore=105.3136;InbreedingCoeff=0.9963;MQ=86.35;MQ0=0;MQRankSum=-15.649;QD=77.75;ReadPosRankSum=-1.861;VQSLOD=4.9710;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,33:45:99:3359,99,0	0/0:7,0:7:18.06:0,18,420	0/0:17,0:17:42.14:0,42,935	0/0:24,0:24:44.04:0,44,1075	0/0:24,0:24:66.20:0,66,1450	1/1:2,13:15:42.14:1445,42,0	0/0:14,0:14:39.12:0,39,844	1/1:9,12:22:66.23:2133,66,0	1/1:2,11:13:36.12:1194,36,0	0/0:27,0:27:72.23:0,72,1613	0/0:11,0:11:33.10:0,33,721	0/0:15,0:15:39.13:0,39,907	0/0:10,0:10:27.07:0,27,565	0/0:16,0:16:48.15:0,48,1075	0/0:17,0:17:51.16:0,51,1144	0/0:20,0:20:57.20:0,57,1327	0/0:28,0:28:66.23:0,66,1539	1/1:3,14:17:27.09:817,27,0	1/1:8,5:15:39.10:1146,39,0	1/1:5,8:14:24.08:845,24,0	1/1:8,7:15:18.06:601,18,0	0/0:16,0:16:48.16:0,48,1120	0/0:7,0:7:21.07:0,21,479	0/0:25,0:25:72.23:0,72,1591	0/0:13,0:13:39.13:0,39,903	1/1:3,10:13:36.12:1212,36,0	1/1:7,14:22:57.20:1932,57,0	1/1:3,7:10:27.09:943,27,0
chr10	99879709	.	AGTGTGTGTGTGTGTGT	A	957.82	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=4.108;DP=498;FS=1.281;HRun=0;HaplotypeScore=199.5217;InbreedingCoeff=0.6831;MQ=57.04;MQ0=16;MQRankSum=-3.220;QD=9.67;ReadPosRankSum=-0.648;VQSLOD=2.7194;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:18.06:0,18,972	0/0:9,0:9:21.07:0,21,1371	0/0:26,0:19:3.01:0,3,34	./.	0/0:17,0:21:18.06:0,18,676	0/0:14,0:18:7.88:0,8,80	0/0:19,0:20:27.09:0,27,1538	1/1:28,0:27:3.01:46,3,0	0/0:5,0:7:3.01:0,3,89	0/0:28,0:27:49.98:0,50,2208	0/0:14,0:15:18.06:0,18,1244	0/0:16,0:16:24.08:0,24,1499	0/0:21,0:21:33.11:0,33,1849	0/0:13,0:13:15.52:0,16,929	0/0:15,0:16:25.83:0,26,1771	0/0:20,0:19:9.03:0,9,616	0/0:10,0:12:22.89:0,23,1315	0/0:13,0:13:25.33:0,25,968	0/0:14,0:13:0.47:0,0,2	1/1:20,6:26:12:414,12,0	0/0:10,0:9:6.02:0,6,384	0/0:16,0:16:21.07:0,21,1433	0/0:17,0:17:14.26:0,14,963	0/0:11,0:20:17.11:0,17,1295	0/0:15,0:17:18.06:0,18,1146	1/1:19,1:21:6.01:243,6,0	1/1:10,2:11:2.70:131,3,0	1/1:8,4:12:6.02:262,6,0
chr10	99880174	.	T	TAG	1033.41	PASS	AB=0.932;AC=9;AF=0.161;AN=56;BaseQRankSum=2.891;DP=2320;DS;FS=13.534;HRun=0;HaplotypeScore=212.0108;InbreedingCoeff=-0.1944;MQ=32.78;MQ0=969;MQRankSum=-3.507;QD=1.41;ReadPosRankSum=-0.847;VQSLOD=1.1759;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:179,0:30:58.48:58,0,171	0/0:27,0:13:28.15:0,28,350	0/0:102,0:31:12.73:0,13,100	0/0:107,0:26:43.78:0,44,132	0/0:55,0:40:80:0,80,847	0/1:29,0:14:57.56:58,0,116	0/0:122,0:50:92.18:0,92,982	0/0:202,0:67:43.86:0,44,474	0/1:59,4:38:99:199,0,413	0/0:101,0:35:82.40:0,82,798	0/0:28,0:20:49.29:0,49,551	0/0:42,0:34:78.89:0,79,983	0/1:32,3:30:41.90:42,0,685	0/0:41,0:29:83.54:0,84,1050	0/0:62,0:47:99:0,114,1437	0/1:45,2:32:31.02:31,0,736	0/0:154,1:72:99:0,123,1967	0/1:104,0:35:58.38:58,0,589	0/0:204,0:24:26.33:0,26,204	0/0:46,0:27:45.30:0,45,686	0/1:149,5:84:99:126,0,1015	0/1:28,22:34:59.91:510,0,60	0/0:43,1:31:59.19:0,59,614	0/0:103,0:42:99:0,110,1278	0/0:25,0:18:43.56:0,44,419	0/0:96,1:56:99:0,130,1365	0/1:66,6:44:91.88:92,0,620	0/0:20,0:6:12.04:0,12,161
chr10	99880180	.	TAG	T	3599.11	PASS	AB=0.843;AC=12;AF=0.214;AN=56;BaseQRankSum=10.205;DP=1826;DS;FS=0.340;HRun=0;HaplotypeScore=189.5417;InbreedingCoeff=-0.0681;MQ=36.56;MQ0=530;MQRankSum=-0.685;QD=4.63;ReadPosRankSum=-0.441;VQSLOD=2.7899;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:84,2:28:3.28:0,3,295	0/0:17,0:12:28.60:0,29,410	0/0:154,0:31:38.82:0,39,193	0/0:112,0:26:28.44:0,28,153	0/0:47,0:37:78.77:0,79,1088	0/1:23,4:14:99:186,0,128	0/0:82,9:54:27.68:0,28,1010	0/0:113,0:47:86.23:0,86,419	0/1:47,9:37:99:360,0,574	0/0:59,1:33:15.45:0,15,773	0/0:23,0:18:38.44:0,38,604	0/1:35,1:32:1.50:1,0,1144	0/0:34,1:30:79.68:0,80,1208	0/0:37,1:29:79.38:0,79,1361	0/0:55,1:46:99:0,113,1737	0/0:45,1:31:82.69:0,83,1253	0/1:102,13:74:79.99:80,0,2045	0/1:69,9:35:99:209,0,757	0/1:119,5:25:99:154,0,139	0/1:23,17:25:84.89:550,0,85	0/1:95,44:84:99:743,0,518	0/0:40,0:29:43.82:0,44,498	0/0:38,0:31:43.50:0,43,830	0/0:66,4:43:49.72:0,50,1410	0/0:22,0:19:43.75:0,44,642	0/1:59,17:53:99:690,0,287	0/1:43,27:42:99:448,0,266	1/1:10,5:6:12.04:177,12,0
chr10	99880188	.	TAG	T	977.24	PASS	AB=0.843;AC=6;AF=0.107;AN=56;BaseQRankSum=12.075;DP=1406;DS;FS=20.001;HRun=0;HaplotypeScore=194.8632;InbreedingCoeff=-0.1319;MQ=41.13;MQ0=281;MQRankSum=-8.834;QD=3.20;ReadPosRankSum=-1.853;VQSLOD=1.1726;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,5:28:99:147,0,639	0/0:12,0:11:30.10:0,30,562	0/0:220,3:31:69.87:0,70,980	0/0:103,0:28:15.39:0,15,565	0/0:42,0:36:96.28:0,96,1728	0/1:11,7:15:45.13:277,0,45	0/1:51,10:51:7.16:7,0,1895	0/0:64,5:43:9.95:0,10,1607	0/1:29,11:34:99:380,0,701	0/0:37,2:35:5.95:0,6,1449	0/0:18,0:17:48.16:0,48,884	0/0:33,0:32:72.50:0,73,1511	0/0:33,0:30:78.22:0,78,1407	0/0:32,0:27:75.21:0,75,1334	0/0:42,1:42:58.42:0,58,1742	0/0:35,0:31:81.27:0,81,1485	0/0:75,1:68:50.87:0,51,2775	0/1:34,4:34:99:165,0,963	0/0:45,6:24:57.18:0,57,940	0/0:33,1:27:28.07:0,28,975	0/1:100,11:78:99:123,0,2078	0/0:33,1:27:7.05:0,7,850	0/0:33,0:26:66.23:0,66,1196	0/0:46,0:41:9.40:0,9,1780	0/0:16,1:16:42.14:0,42,773	0/0:58,1:45:66.34:0,66,1712	0/0:50,5:38:14.36:0,14,1188	0/0:10,0:6:11.89:0,12,132
chr10	99880196	.	TAG	T	1498.57	PASS	AB=0.850;AC=8;AF=0.143;AN=56;BaseQRankSum=9.859;DP=1303;DS;FS=7.900;HRun=0;HaplotypeScore=184.5109;InbreedingCoeff=-0.1662;MQ=43.71;MQ0=247;MQRankSum=-9.012;QD=2.78;ReadPosRankSum=-3.923;VQSLOD=1.1641;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,8:24:99:229,0,684	0/0:12,0:11:33.10:0,33,588	0/1:232,3:30:21.89:22,0,505	0/1:88,6:31:99:175,0,448	0/0:40,1:38:99:0,102,1855	0/1:4,10:14:43.21:355,0,43	0/0:51,4:48:47.55:0,48,1829	0/0:56,4:42:94.41:0,94,1529	0/1:25,17:37:99:570,0,757	0/0:35,0:33:58.33:0,58,1501	0/0:21,0:20:34.24:0,34,928	0/0:30,0:29:87.18:0,87,1533	0/0:30,1:29:78.21:0,78,1393	0/0:27,0:25:69.24:0,69,1271	0/0:36,0:36:91.55:0,92,1685	0/0:31,1:31:90.27:0,90,1592	0/0:65,1:62:99:0,128,2849	0/1:29,7:33:99:214,0,1058	0/1:39,1:21:60.75:61,0,548	0/0:32,0:27:74.32:0,74,1101	0/0:99,3:74:87.17:0,87,2236	0/0:34,0:26:58.18:0,58,1012	0/0:33,0:26:72.12:0,72,1223	0/1:47,0:42:8.50:8,0,1828	0/0:15,1:15:39.12:0,39,684	0/0:47,0:39:79.48:0,79,1411	0/0:48,1:36:39.57:0,40,1310	0/0:4,0:3:9.03:0,9,165
chr10	99880280	.	ATTAGGG	A	4365.19	PASS	AB=0.947;AC=15;AF=0.268;AN=56;BaseQRankSum=1.395;DP=2479;DS;FS=29.060;HRun=0;HaplotypeScore=282.6489;InbreedingCoeff=0.2266;MQ=33.23;MQ0=1204;MQRankSum=-4.147;QD=3.42;ReadPosRankSum=-0.278;VQSLOD=2.2567;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:148,25:56:99:338,0,116	0/0:30,0:13:24.08:0,24,682	0/0:128,0:14:7.84:0,8,131	0/0:143,0:22:9.18:0,9,75	0/0:59,0:40:72.21:0,72,1866	1/1:33,18:29:7.08:412,7,0	0/0:108,0:48:51.54:0,52,1455	0/1:250,0:58:99:243,0,252	0/1:62,6:35:99:352,0,103	0/0:151,0:49:89.08:0,89,2277	0/0:41,0:27:51.15:0,51,1601	0/0:31,0:26:43.23:0,43,956	0/0:44,0:39:57.34:0,57,1253	0/0:39,0:22:42.07:0,42,1167	0/0:59,0:43:84.75:0,85,2473	0/0:51,0:34:56.62:0,57,1499	0/0:78,0:35:64.44:0,64,1307	0/1:67,9:34:99:112,0,121	0/1:250,0:15:67.25:67,0,102	1/1:53,9:31:0.24:705,0,0	0/1:94,0:41:46.23:46,0,64	0/0:53,0:39:71.96:0,72,1888	0/0:35,0:20:30.10:0,30,817	0/0:86,0:53:95.01:0,95,2451	0/0:64,0:27:42.14:0,42,1315	0/1:120,8:49:99:913,0,160	1/1:67,11:36:3.34:751,3,0	1/1:41,3:10:21.05:426,21,0
chr10	99880741	.	A	ACCCTG	5448	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.055;DP=687;FS=13.286;HRun=0;HaplotypeScore=120.1220;InbreedingCoeff=0.9988;MQ=81.88;MQ0=0;MQRankSum=-6.858;QD=81.31;ReadPosRankSum=1.212;VQSLOD=6.6483;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:35:90.31:2855,90,0	0/0:8,0:8:24.08:0,24,559	0/0:22,0:22:63.22:0,63,1405	0/0:25,0:25:72.19:0,72,1462	0/0:39,0:39:99:0,114,2655	0/0:33,0:33:99:0,99,2221	0/0:17,0:17:51.16:0,51,1143	0/0:34,0:34:99:0,102,2334	1/1:2,19:22:51.18:1695,51,0	0/0:29,0:29:87.29:0,87,1984	0/0:28,0:28:81.28:0,81,1888	0/0:26,0:26:78.27:0,78,1812	0/0:23,0:23:66.20:0,66,1426	0/0:20,0:20:60.21:0,60,1379	0/0:34,0:34:96.33:0,96,2237	0/0:23,0:23:66.23:0,66,1516	0/0:12,0:12:36.12:0,36,839	1/1:1,9:10:27.09:898,27,0	0/0:21,0:21:63.21:0,63,1404	0/0:35,0:35:99:0,102,2284	0/0:15,0:15:42.13:0,42,933	0/0:25,0:25:69.24:0,69,1580	0/0:26,0:26:78.27:0,78,1797	0/0:16,0:16:42.14:0,42,964	0/0:22,0:22:63.22:0,63,1467	0/0:33,0:33:99:0,99,2247	0/0:34,0:34:99:0,102,2263	0/0:20,0:20:60.21:0,60,1395
chr10	99881364	.	CTTT	C	3988.08	PASS	AB=0.556;AC=13;AF=0.232;AN=56;BaseQRankSum=3.692;DP=639;FS=0.393;HRun=13;HaplotypeScore=101.2574;InbreedingCoeff=0.9367;MQ=69.53;MQ0=4;MQRankSum=-3.073;QD=24.02;ReadPosRankSum=1.280;VQSLOD=2.8818;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:42:90.15:0,90,1442	0/0:8,0:9:17.97:0,18,271	0/0:26,0:15:21.68:0,22,214	0/0:20,0:15:11.93:0,12,141	0/0:26,0:29:81.09:0,81,1253	0/0:4,0:24:41.84:0,42,320	0/0:23,0:24:57.16:0,57,1003	1/1:12,24:36:68.67:806,69,0	0/0:3,0:15:31.13:0,31,232	0/0:29,0:30:69.16:0,69,1134	0/0:16,0:19:45.05:0,45,791	0/0:15,0:14:33.52:0,34,518	0/0:12,0:15:30.09:0,30,514	0/0:15,0:17:36.09:0,36,593	0/0:14,0:15:33.06:0,33,533	0/0:21,0:22:57.14:0,57,993	0/0:30,0:38:91.41:0,91,1429	0/0:5,0:28:50.31:0,50,371	1/1:7,16:25:55.29:640,55,0	1/1:2,24:27:61.37:714,61,0	1/1:6,12:19:36.91:421,37,0	0/0:23,0:26:54.12:0,54,899	0/0:15,0:16:36.06:0,36,573	0/0:23,0:24:60.15:0,60,997	0/0:15,0:16:30.08:0,30,485	0/1:5,20:24:0.56:598,0,1	1/1:3,24:28:53.34:627,53,0	1/1:0,6:6:15.05:182,15,0
chr10	99882427	.	A	ATG	1819.38	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.691;DP=490;FS=6.461;HRun=0;HaplotypeScore=67.6234;InbreedingCoeff=0.9782;MQ=57.48;MQ0=6;MQRankSum=-4.165;QD=33.69;ReadPosRankSum=2.425;VQSLOD=5.6873;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,18:26:48.16:821,48,0	0/0:8,0:8:24.06:0,24,300	0/0:26,0:13:32.76:0,33,362	0/0:17,0:15:45.15:0,45,584	0/0:24,0:24:66.21:0,66,866	0/0:16,0:16:33.09:0,33,419	0/0:7,0:7:15:0,15,164	0/0:34,0:34:96.27:0,96,1185	1/1:3,9:12:30.09:486,30,0	0/0:18,0:17:39.13:0,39,512	0/0:21,0:21:51.17:0,51,670	0/0:26,0:26:72.23:0,72,946	0/0:14,0:14:39.11:0,39,496	0/0:11,0:11:27.04:0,27,309	0/0:8,0:8:24.08:0,24,315	0/0:13,0:13:36.12:0,36,473	0/0:38,0:38:99:0,99,1265	1/1:4,12:15:38.14:654,38,0	0/0:22,0:21:51.17:0,51,670	0/0:16,0:16:48.16:0,48,630	0/0:19,0:18:51.17:0,51,667	0/0:6,0:6:18.06:0,18,237	0/0:4,0:4:12.04:0,12,158	0/0:11,0:11:30.10:0,30,393	0/0:20,0:20:51.16:0,51,655	0/0:25,0:25:69.21:0,69,890	0/0:17,0:17:45.15:0,45,591	0/0:14,0:14:36.12:0,36,472
chr10	99882479	.	T	TTG	586	PASS	AB=0.974;AC=8;AF=0.143;AN=56;BaseQRankSum=-0.578;DP=525;FS=0.865;HRun=0;HaplotypeScore=81.2473;InbreedingCoeff=0.6365;MQ=59.65;MQ0=6;MQRankSum=-1.404;QD=6.98;ReadPosRankSum=0.574;VQSLOD=3.1760;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:0.01:0,0,0	0/0:6,0:7:14.88:0,15,157	0/0:20,0:8:2.94:0,3,18	0/0:20,0:13:1.99:0,2,38	0/0:21,0:21:48.10:0,48,537	1/1:5,17:22:3.61:527,4,0	0/0:14,0:16:41.65:0,42,400	0/0:32,0:33:46.06:0,46,466	1/1:8,0:8:14.62:101,15,0	0/0:19,0:21:44.78:0,45,479	0/0:25,0:25:68.28:0,68,711	0/0:20,0:20:48.12:0,48,549	0/0:9,0:9:18.04:0,18,203	0/0:14,0:14:33.10:0,33,393	0/0:13,0:13:30.09:0,30,357	0/0:16,0:16:27.07:0,27,311	0/0:37,0:37:81.04:0,81,900	1/1:15,0:14:8.58:58,9,0	0/1:17,1:17:29.79:30,0,135	0/0:20,0:20:44.78:0,45,490	0/0:32,0:34:84.02:0,84,930	0/0:7,0:7:17.92:0,18,180	0/0:13,0:13:33.06:0,33,377	0/0:15,0:15:39.06:0,39,436	0/0:16,0:17:38.90:0,39,407	0/0:24,0:24:48.53:0,49,541	0/0:25,0:25:56.97:0,57,630	0/0:12,0:14:32.91:0,33,358
chr10	99882513	.	A	AT	1240.98	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.845;DP=453;FS=7.577;HRun=1;HaplotypeScore=59.0970;InbreedingCoeff=0.9722;MQ=61.81;MQ0=2;MQRankSum=-4.764;QD=28.20;ReadPosRankSum=-2.384;VQSLOD=2.2082;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:32.14:484,32,0	0/0:5,0:5:15.05:0,15,210	0/0:7,0:6:13.75:0,14,141	0/0:13,0:11:30.07:0,30,373	0/0:21,0:21:63.21:0,63,881	0/0:22,0:22:48.12:0,48,634	0/0:13,0:13:39.13:0,39,545	0/0:29,0:29:81.23:0,81,1058	1/1:0,12:12:30.10:468,30,0	0/0:26,0:26:78.25:0,78,1073	0/0:19,0:19:54.18:0,54,754	0/0:15,0:15:45.14:0,45,611	0/0:7,0:7:21.07:0,21,293	0/0:16,0:16:48.16:0,48,671	0/0:14,0:14:36.11:0,36,486	0/0:10,0:10:24.08:0,24,336	0/0:29,0:29:81.27:0,81,1132	1/1:1,11:11:27.09:431,27,0	0/0:10,0:10:24.08:0,24,336	0/0:20,0:20:60.19:0,60,818	0/0:28,0:28:75.25:0,75,1048	0/0:4,0:4:12.04:0,12,168	0/0:14,0:14:42.13:0,42,570	0/0:19,0:19:57.15:0,57,757	0/0:14,0:14:39.12:0,39,528	0/0:19,0:19:57.19:0,57,797	0/0:24,0:24:72.24:0,72,1005	0/0:10,0:10:27.09:0,27,377
chr10	99882612	.	A	AAAGT	4698.95	PASS	AB=0.944;AC=7;AF=0.125;AN=56;BaseQRankSum=-7.827;DP=490;FS=10.372;HRun=0;HaplotypeScore=83.5187;InbreedingCoeff=0.8278;MQ=76.21;MQ0=2;MQRankSum=-4.876;QD=55.94;ReadPosRankSum=2.777;VQSLOD=6.1048;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,21:35:81.26:2145,81,0	0/0:8,0:8:24.08:0,24,485	0/0:25,0:17:45.99:0,46,797	0/0:16,0:11:16.17:0,16,289	0/0:21,0:21:63.20:0,63,1280	0/0:16,0:15:45.14:0,45,904	0/0:18,0:18:48.16:0,48,1005	0/0:25,0:25:72.25:0,72,1493	1/1:0,11:11:30.10:867,30,0	0/0:21,0:21:60.20:0,60,1222	0/0:14,0:14:39.12:0,39,780	0/0:22,0:22:66.23:0,66,1383	0/0:15,0:15:45.15:0,45,940	0/0:9,0:9:27.09:0,27,553	0/0:14,0:14:39.12:0,39,777	0/1:16,1:17:35.80:36,0,917	0/0:33,0:32:90.31:0,90,1868	1/1:1,20:20:57.20:1651,57,0	0/0:23,0:23:66.21:0,66,1308	0/0:15,0:14:45.14:0,45,905	0/0:12,0:12:33.11:0,33,679	0/0:13,0:12:30.09:0,30,590	0/0:12,0:12:36.11:0,36,715	0/0:13,0:13:36.04:0,36,668	0/0:15,0:15:42.14:0,42,881	0/0:23,0:23:63.22:0,63,1321	0/0:17,0:17:51.16:0,51,1031	0/0:5,0:5:15.05:0,15,315
chr10	99883041	.	TGTTTGCCC	T	4315.98	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.709;DP=723;FS=0.531;HRun=0;HaplotypeScore=181.5421;InbreedingCoeff=0.9934;MQ=84.55;MQ0=0;MQRankSum=-11.497;QD=52.63;ReadPosRankSum=0.808;VQSLOD=4.8079;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,40:47:82.57:2340,83,0	0/0:10,0:10:30.10:0,30,1230	0/0:23,0:23:66.20:0,66,2025	0/0:29,0:29:72.54:0,73,2412	0/0:25,0:25:75.26:0,75,3344	0/0:24,0:24:72.25:0,72,3011	0/0:22,0:22:63.21:0,63,2406	0/0:31,0:31:87.30:0,87,3402	1/1:2,21:23:54.19:1546,54,0	0/0:24,0:24:72.24:0,72,2978	0/0:21,0:21:63.22:0,63,2697	0/0:28,0:28:84.27:0,84,3645	0/0:19,0:19:57.20:0,57,2482	0/0:24,0:24:66.23:0,66,2846	0/0:31,0:31:93.32:0,93,4044	0/0:27,0:27:78.27:0,78,3254	0/0:39,0:39:99:0,111,4583	1/1:3,9:11:15.05:430,15,0	0/0:28,0:28:81.27:0,81,3106	0/0:22,0:22:66.23:0,66,2815	0/0:38,0:38:99:0,111,4703	0/0:32,0:32:93.32:0,93,3824	0/0:19,0:19:54.19:0,54,2341	0/0:31,0:31:93.32:0,93,4057	0/0:21,0:20:63.20:0,63,2557	0/0:37,0:37:99:0,105,4415	0/0:28,0:28:75.26:0,75,3207	0/0:8,0:8:24.08:0,24,1030
chr10	99883247	.	GTGTGTC	G	435.94	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=3.503;DP=758;FS=3.491;HRun=0;HaplotypeScore=164.2584;InbreedingCoeff=0.8831;MQ=60.39;MQ0=11;MQRankSum=-2.266;QD=15.57;ReadPosRankSum=-0.061;VQSLOD=3.0456;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:10,0:10:27.09:0,27,812	0/0:33,0:16:36.03:0,36,678	0/0:49,0:24:45.86:0,46,968	0/0:18,0:18:45.10:0,45,1071	0/0:23,0:21:24.07:0,24,568	0/0:34,0:34:84.26:0,84,2272	0/0:33,0:31:64.44:0,64,1595	1/1:9,7:16:23.85:487,24,0	0/0:37,0:36:99:0,99,2284	0/0:15,0:14:30.06:0,30,696	0/0:38,0:38:99:0,102,2537	0/0:14,0:14:33.09:0,33,824	0/0:21,0:21:54.14:0,54,1326	0/0:32,0:32:84.25:0,84,2213	0/0:30,0:30:83.87:0,84,1736	0/0:46,0:46:99:0,126,3255	1/1:0,12:12:3.01:57,3,0	0/0:22,0:22:52.55:0,53,1019	0/0:22,0:22:37.16:0,37,872	0/0:58,0:57:73.46:0,73,2101	0/0:13,0:13:27.08:0,27,791	0/0:14,0:14:42.13:0,42,1134	0/0:45,0:45:99:0,123,3250	0/0:28,0:28:54.12:0,54,1672	0/0:32,0:32:84.22:0,84,1820	0/0:23,0:23:57.62:0,58,1458	0/0:6,0:6:12.04:0,12,356
chr10	99883253	.	C	CTG	178	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=3.743;DP=761;FS=4.286;HRun=0;HaplotypeScore=119.0794;InbreedingCoeff=0.4237;MQ=57.04;MQ0=14;MQRankSum=-2.152;QD=4.56;ReadPosRankSum=-2.217;VQSLOD=2.5787;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:2.92:0,3,17	0/0:9,0:9:27.08:0,27,329	0/0:30,0:13:14.98:0,15,147	0/0:46,0:21:1.86:0,2,241	0/0:17,0:17:36.11:0,36,436	1/1:5,20:23:17.42:253,17,0	0/0:35,0:35:72.19:0,72,856	0/0:38,0:36:5.72:0,6,493	0/1:14,0:14:15.64:27,0,16	0/0:36,0:35:74.99:0,75,867	0/0:17,0:16:6.23:0,6,240	0/0:37,0:37:81.21:0,81,974	0/0:15,0:15:28.51:0,29,334	0/0:21,0:22:44.97:0,45,524	0/0:30,0:30:75.17:0,75,888	0/0:30,0:30:59.77:0,60,674	0/0:46,0:47:90.96:0,91,1243	0/0:12,0:12:1.25:0,1,3	0/0:23,0:23:25.31:0,25,249	0/0:22,0:22:23.89:0,24,189	0/0:60,0:58:12.61:0,13,367	0/0:16,0:16:10.30:0,10,250	0/0:15,0:15:36.05:0,36,403	0/0:43,0:43:99:0,101,1153	0/0:25,0:27:49.99:0,50,558	0/0:32,0:32:39.97:0,40,481	0/0:23,0:23:41.95:0,42,345	0/0:6,0:6:10.61:0,11,89
chr10	99883269	.	C	CTGTG	3120.60	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=-4.074;DP=782;FS=1.020;HRun=0;HaplotypeScore=142.0320;InbreedingCoeff=0.6185;MQ=53.96;MQ0=17;MQRankSum=-0.802;QD=11.52;ReadPosRankSum=-1.877;VQSLOD=3.0423;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:37:13.50:14,0,30	0/0:9,0:10:21.06:0,21,320	0/0:20,0:4:2.99:0,3,24	./.	0/0:20,0:20:33.04:0,33,468	0/0:24,0:22:26.64:0,27,248	0/0:33,0:37:41.24:0,41,897	0/1:38,0:33:21.83:252,0,22	0/1:12,0:19:22.24:22,0,44	0/0:31,0:33:52.82:0,53,961	0/0:18,0:17:19.39:0,19,395	0/0:37,0:37:81.16:0,81,1152	0/0:16,0:18:37.89:0,38,563	0/0:20,0:25:42.12:0,42,598	0/0:32,0:32:54.06:0,54,796	0/0:25,0:26:51.90:0,52,759	0/0:47,0:48:67.91:0,68,1208	0/0:15,0:15:2.81:0,3,17	1/1:11,8:22:29.73:448,30,0	1/1:4,17:23:15.05:366,15,0	1/1:24,35:55:12.68:556,13,0	0/0:18,0:18:41.74:0,42,542	0/0:13,0:13:27.08:0,27,411	0/0:44,0:46:83.92:0,84,1219	0/0:32,0:33:56.09:0,56,888	1/1:17,19:37:5.18:998,5,0	1/1:9,17:26:23.82:498,24,0	1/1:2,4:6:6.02:146,6,0
chr10	99883506	.	TGGCTCTG	T	2186.10	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.984;DP=344;FS=7.630;HRun=0;HaplotypeScore=82.7625;InbreedingCoeff=0.9207;MQ=75.59;MQ0=0;MQRankSum=-9.023;QD=50.84;ReadPosRankSum=1.414;VQSLOD=2.8578;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:18:39.13:926,39,0	0/0:10,0:10:30.10:0,30,1169	0/0:15,0:14:42.14:0,42,1660	0/0:19,0:19:51.13:0,51,1819	0/0:4,0:4:12.03:0,12,356	0/0:10,0:10:30.10:0,30,1211	0/0:21,0:21:60.19:0,60,2184	0/0:10,0:10:27.09:0,27,1091	1/1:3,12:15:30.10:769,30,0	0/0:9,0:9:24.07:0,24,799	0/0:9,0:9:24.08:0,24,948	0/0:17,0:17:51.09:0,51,1845	0/0:12,0:12:24.55:0,25,909	0/0:16,0:16:45.15:0,45,1774	0/0:20,0:20:60.21:0,60,2309	0/0:13,0:13:39.13:0,39,1575	0/0:15,0:15:42.14:0,42,1559	1/1:2,8:10:24.08:633,24,0	0/0:11,0:11:31.88:0,32,983	0/0:10,0:10:27.09:0,27,1061	0/0:14,0:14:36.58:0,37,1273	0/0:8,0:8:9.50:0,10,345	0/0:5,0:5:11.59:0,12,416	0/0:15,0:15:45.15:0,45,1668	0/0:9,0:9:27.09:0,27,1086	0/0:9,0:9:27.09:0,27,980	0/0:18,0:18:45.15:0,45,1802	0/0:2,0:2:6.02:0,6,242
chr10	99883612	.	TCC	T	390.21	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=2.268;DP=357;FS=30.171;HRun=12;HaplotypeScore=50.5742;InbreedingCoeff=0.5593;MQ=69.29;MQ0=2;MQRankSum=-0.642;QD=16.26;ReadPosRankSum=2.715;VQSLOD=0.3267;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:27:41.99:0,42,459	0/0:7,0:7:9.03:0,9,134	0/0:18,0:16:15.96:0,16,174	0/0:16,0:14:25.92:0,26,223	0/0:5,0:5:12.04:0,12,178	1/1:4,20:24:45.69:484,46,0	0/0:13,0:17:23.27:0,23,370	0/0:9,0:9:3:0,3,26	0/0:12,0:12:27.05:0,27,335	0/0:15,0:17:28.10:0,28,301	0/0:16,0:18:25.92:0,26,291	0/0:12,0:14:26.55:0,27,327	0/0:5,0:6:14.54:0,15,188	0/0:12,0:12:27.03:0,27,316	0/0:7,0:8:14.52:0,15,166	0/0:10,0:10:21.06:0,21,294	0/0:14,0:17:41.22:0,41,455	0/0:21,0:25:59.16:0,59,796	0/0:3,0:3:6:0,6,58	0/0:8,0:8:9.45:0,9,89	0/0:15,0:15:13.28:0,13,157	0/0:10,0:10:24.06:0,24,318	0/0:15,0:18:34.50:0,35,329	0/0:13,0:13:36.11:0,36,514	0/0:11,0:11:8.50:0,9,79	0/0:8,0:8:6.01:0,6,73	0/0:4,0:4:9.03:0,9,121	./.
chr10	99884124	.	GC	G	1181.18	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.709;DP=554;FS=16.188;HRun=9;HaplotypeScore=81.5949;InbreedingCoeff=0.9936;MQ=87.80;MQ0=0;MQRankSum=-3.473;QD=18.46;ReadPosRankSum=2.861;VQSLOD=2.7454;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:27:71.07:637,71,0	0/0:13,0:13:36.09:0,36,404	0/0:27,0:25:39.42:0,39,419	0/0:24,0:23:25.15:0,25,266	0/0:26,0:26:75.19:0,75,840	0/0:9,0:11:18.93:0,19,101	0/0:17,0:17:39.12:0,39,450	0/0:26,0:26:54.05:0,54,233	1/1:3,15:18:36.01:330,36,0	0/0:20,1:21:48.14:0,48,545	0/0:17,0:17:45.13:0,45,519	0/0:23,0:24:57:0,57,636	0/0:12,0:12:36.09:0,36,401	0/0:10,0:10:21.06:0,21,242	0/0:24,0:24:66.20:0,66,762	0/0:19,0:19:54.16:0,54,623	0/0:28,0:27:75.22:0,75,865	1/1:5,14:19:39:357,39,0	0/0:16,0:16:32.51:0,33,145	0/0:20,0:20:51.02:0,51,212	0/0:14,0:14:26.78:0,27,110	0/0:23,0:24:69.02:0,69,764	0/0:20,0:21:57.09:0,57,622	0/0:26,0:26:69.19:0,69,787	0/0:19,0:19:54.16:0,54,623	0/0:17,0:17:42.99:0,43,178	0/0:24,0:24:58.92:0,59,244	0/0:10,0:10:21.43:0,21,88
chr10	99884126	.	C	CT	4658.22	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-12.336;DP=556;FS=0.382;HRun=0;HaplotypeScore=72.2141;InbreedingCoeff=0.9984;MQ=87.99;MQ0=0;MQRankSum=-2.125;QD=37.57;ReadPosRankSum=1.845;VQSLOD=5.0744;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:73.58:0,74,465	0/0:13,0:13:37.92:0,38,477	0/0:27,0:25:52.79:0,53,621	0/0:29,0:28:38.78:0,39,501	0/0:26,0:26:75.24:0,75,1016	0/0:11,0:11:20:0,20,144	0/0:17,0:17:51.13:0,51,646	1/1:2,22:24:64.90:893,65,0	0/0:18,0:18:44.28:0,44,296	0/0:20,0:20:60.14:0,60,755	0/0:18,0:18:45.15:0,45,622	0/0:24,0:24:64.15:0,64,866	0/0:12,0:12:36.10:0,36,471	0/0:10,0:10:30.07:0,30,371	0/0:25,0:25:75.22:0,75,998	0/0:18,0:18:54.18:0,54,753	0/0:27,0:26:81.24:0,81,1092	0/0:19,0:19:53.22:0,53,362	1/1:0,14:14:42.07:541,42,0	1/1:0,20:20:60.15:829,60,0	1/1:0,13:13:30.10:429,30,0	0/0:25,0:25:58.83:0,59,913	0/0:21,0:21:52.99:0,53,774	0/0:26,0:26:75.23:0,75,1012	0/0:19,0:19:57.18:0,57,779	1/1:0,17:17:48.16:683,48,0	1/1:1,25:26:64.77:939,65,0	1/1:0,10:10:24.08:343,24,0
chr10	99884745	.	T	TA	939.39	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.650;DP=659;FS=1.647;HRun=1;HaplotypeScore=77.9064;InbreedingCoeff=0.9915;MQ=93.33;MQ0=0;MQRankSum=-2.777;QD=36.13;ReadPosRankSum=0.677;VQSLOD=3.9918;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.22:0,69,896	0/0:19,0:19:54.15:0,54,683	0/0:22,0:22:66.14:0,66,797	0/0:34,0:34:89.38:0,89,1150	0/0:18,0:18:54.18:0,54,701	1/1:0,26:26:69.23:1034,69,0	0/0:28,0:28:78.25:0,78,1013	0/0:34,0:34:99:0,99,1260	0/0:19,0:19:54.15:0,54,685	0/0:22,0:22:60.18:0,60,766	0/0:22,0:22:63.20:0,63,818	0/0:21,0:21:54.18:0,54,701	0/0:16,0:16:48.16:0,48,623	0/0:20,0:20:57.17:0,57,724	0/0:17,0:17:48.16:0,48,623	0/0:24,0:24:72.23:0,72,935	0/0:33,0:33:99:0,99,1268	0/0:29,0:29:87.28:0,87,1130	0/0:30,0:30:87.27:0,87,1118	0/0:21,0:21:63.20:0,63,817	0/0:38,0:38:99:0,111,1441	0/0:15,0:15:45.14:0,45,575	0/0:20,0:20:57.15:0,57,720	0/0:44,0:43:99:0,103,1538	0/0:21,0:21:63.20:0,63,818	0/0:26,0:26:78.25:0,78,1013	0/0:10,0:10:30.10:0,30,388	0/0:6,0:6:18.06:0,18,234
chr10	99885148	.	TTATC	T	6093.34	PASS	AB=0.571;AC=27;AF=0.500;AN=54;BaseQRankSum=-3.787;DP=551;FS=1.720;HRun=0;HaplotypeScore=111.5664;InbreedingCoeff=0.8212;MQ=60.46;MQ0=9;MQRankSum=8.077;QD=23.62;ReadPosRankSum=4.070;VQSLOD=4.8853;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:20.24:0,20,575	1/1:1,10:11:17.98:267,18,0	./.	0/0:10,0:5:0:0,0,0	1/1:11,21:32:60.17:910,60,0	0/0:7,0:25:12.04:0,12,209	1/1:6,8:14:13.79:232,14,0	0/0:39,0:39:35.50:0,36,441	0/0:5,0:11:18.06:0,18,308	0/1:6,18:23:16.38:677,0,16	1/1:5,15:20:45.07:648,45,0	1/1:6,12:18:21.07:328,21,0	1/1:4,7:11:12.04:187,12,0	0/0:16,0:16:33.11:0,33,762	1/1:2,9:11:24.08:374,24,0	1/1:9,13:22:21.07:328,21,0	1/1:15,22:37:60.20:936,60,0	0/0:8,0:16:9.03:0,9,146	0/0:20,0:25:15.05:0,15,243	0/0:10,0:29:30.10:0,30,521	0/0:11,0:11:6.01:0,6,76	1/1:1,8:9:21.07:317,21,0	1/1:4,7:11:15.05:234,15,0	1/1:8,1:9:2.92:47,3,0	1/1:11,18:29:39.13:608,39,0	0/0:15,0:38:8.53:0,9,721	0/0:8,0:23:24.08:0,24,398	0/0:7,0:11:15.05:0,15,252
chr10	99885778	.	AT	A	1065.62	PASS	AB=1.000;AC=17;AF=0.315;AN=54;BaseQRankSum=6.989;DP=461;FS=0.567;HRun=2;HaplotypeScore=62.6440;InbreedingCoeff=0.9140;MQ=83.15;MQ0=0;MQRankSum=-5.394;QD=10.15;ReadPosRankSum=-3.639;VQSLOD=0.1720;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,5:14:32.95:271,33,0	0/0:5,0:5:12.02:0,12,157	0/0:23,0:23:62.47:0,62,776	0/0:18,0:18:48.14:0,48,659	0/0:23,0:23:69.19:0,69,971	0/0:12,0:12:19.99:0,20,86	0/0:17,0:17:48.15:0,48,698	1/1:8,0:8:12.47:111,12,0	1/1:5,8:13:32.84:276,33,0	0/0:28,0:27:84.27:0,84,1207	0/0:14,0:14:42.13:0,42,609	0/0:15,0:15:42.13:0,42,609	0/0:18,0:18:51.16:0,51,743	0/0:21,0:21:60.19:0,60,877	0/0:25,0:25:75.23:0,75,1071	0/0:18,0:18:54.18:0,54,809	0/0:33,0:33:99:0,99,1441	1/1:13,11:24:32.97:290,33,0	1/1:4,3:7:11.97:100,12,0	./.	1/1:12,0:12:10.65:103,11,0	0/0:17,0:17:51.15:0,51,738	0/0:23,0:23:63.17:0,63,899	0/0:25,0:25:75.25:0,75,1122	0/0:14,0:14:39.13:0,39,582	1/1:5,0:5:6:55,6,0	1/1:15,0:15:6.47:50,6,0	0/1:7,0:7:0:0,0,0
chr10	99885784	.	GA	G	1848.90	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=8.624;DP=467;FS=21.447;HRun=1;HaplotypeScore=56.6709;InbreedingCoeff=0.9553;MQ=81.60;MQ0=0;MQRankSum=-1.976;QD=14.22;ReadPosRankSum=-7.354;VQSLOD=-0.2810;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:8,5:13:35.95:303,36,0	0/0:6,0:6:15.03:0,15,186	0/0:20,0:20:42.31:0,42,598	0/0:16,0:16:47.81:0,48,523	0/0:22,0:22:66.18:0,66,862	1/1:0,16:16:21.07:293,21,0	0/0:19,0:19:54.12:0,54,671	1/1:8,0:8:9.32:57,9,0	1/1:9,8:17:47.80:440,48,0	0/0:27,0:26:75.22:0,75,961	0/0:14,0:14:42.10:0,42,524	0/0:14,0:14:42.14:0,42,572	0/0:19,0:19:54.14:0,54,679	0/0:22,0:22:66.21:0,66,881	0/0:25,0:25:72.22:0,72,953	0/0:21,0:21:63.19:0,63,827	0/0:31,0:31:93.24:0,93,1210	1/1:0,21:21:33.04:321,33,0	1/1:9,1:10:21.48:202,21,0	1/1:5,0:5:3.94:29,4,0	1/1:10,0:10:18.35:107,18,0	0/0:17,0:17:51.13:0,51,645	0/0:22,0:22:60.18:0,60,800	0/0:27,0:27:81.15:0,81,996	0/0:15,0:15:45.09:0,45,536	1/1:6,0:6:9.89:80,10,0	1/1:17,0:17:27.64:176,28,0	1/1:7,0:7:13.37:61,13,0
chr10	99885791	.	GGA	G	156.71	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=4.389;DP=458;FS=7.191;HRun=0;HaplotypeScore=67.7840;InbreedingCoeff=0.7007;MQ=82.12;MQ0=0;MQRankSum=-3.369;QD=4.90;ReadPosRankSum=-3.025;VQSLOD=0.8471;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,5:13:31.90:251,32,0	0/0:6,0:6:15.05:0,15,270	0/0:21,0:21:12.73:0,13,778	0/0:14,0:14:12.65:0,13,442	0/0:22,0:22:60.19:0,60,1047	0/0:20,0:20:39.03:0,39,378	0/0:18,0:18:48.15:0,48,834	0/0:8,0:8:20.91:0,21,193	0/0:15,0:15:31.13:0,31,217	0/0:24,0:24:66.22:0,66,1154	0/0:12,0:12:36.12:0,36,642	0/0:14,0:14:42.14:0,42,755	0/0:18,0:18:48.15:0,48,833	0/0:23,0:23:69.21:0,69,1180	0/0:24,0:24:66.20:0,66,1126	0/0:23,0:23:66.22:0,66,1157	0/0:29,0:29:84.27:0,84,1475	0/1:19,0:19:1.11:1,0,72	0/0:10,0:10:23.53:0,24,271	0/0:8,0:8:21.02:0,21,251	0/0:12,0:12:30.07:0,30,393	0/0:17,0:17:51.15:0,51,856	0/0:22,0:22:60.21:0,60,1064	0/0:24,0:24:72.25:0,72,1282	0/0:14,0:14:42.13:0,42,697	0/0:5,0:5:12.03:0,12,161	0/0:16,0:16:33.03:0,33,407	0/0:7,0:7:18.05:0,18,246
chr10	99885893	.	C	CCG	77.60	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.781;DP=372;FS=4.981;HRun=0;HaplotypeScore=69.1410;InbreedingCoeff=0.7688;MQ=78.71;MQ0=1;MQRankSum=0.570;QD=6.47;ReadPosRankSum=0.119;VQSLOD=2.2016;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,6:12:14.85:166,15,0	0/0:2,0:2:6.01:0,6,68	0/0:31,0:19:19.28:0,19,293	0/0:20,0:15:14.82:0,15,225	0/0:7,0:7:17.90:0,18,145	0/0:12,0:12:27.03:0,27,285	0/0:18,0:18:35.96:0,36,300	0/0:14,0:14:20.98:0,21,192	0/0:17,0:17:17.77:0,18,173	0/0:12,0:12:18.01:0,18,188	0/0:12,0:12:24:0,24,213	0/0:11,0:11:23.99:0,24,205	0/0:12,0:12:26.99:0,27,232	0/0:12,0:12:26.95:0,27,247	0/0:8,0:8:21.01:0,21,199	0/0:12,0:12:20.96:0,21,201	0/0:19,0:19:35.86:0,36,323	0/0:25,0:25:45.61:0,46,263	0/0:19,0:19:36.39:0,36,298	0/0:11,0:11:20.98:0,21,177	0/0:7,0:7:8.97:0,9,71	0/0:9,0:9:18.02:0,18,190	0/0:9,0:9:17.99:0,18,153	0/0:13,0:13:29.98:0,30,255	0/0:9,0:9:17.61:0,18,156	0/0:10,0:10:18:0,18,159	0/0:20,0:20:47.81:0,48,402	0/0:9,0:9:26.97:0,27,226
chr10	99887289	.	G	GTCTA	355.88	PASS	AB=1.000;AC=11;AF=0.275;AN=40;BaseQRankSum=0.353;DP=578;FS=4.177;HRun=0;HaplotypeScore=133.8460;InbreedingCoeff=0.5911;MQ=52.31;MQ0=16;MQRankSum=-0.653;QD=2.85;ReadPosRankSum=0.878;VQSLOD=2.5381;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:21:9.01:0,9,84	1/1:9,5:14:3.01:69,3,0	./.	./.	./.	0/0:7,0:20:2.74:0,3,12	0/0:20,0:16:2.99:0,3,24	./.	./.	0/0:36,0:36:26.99:0,27,324	0/0:25,0:25:17.99:0,18,185	0/0:25,0:25:23.90:0,24,226	0/0:21,0:21:32.82:0,33,293	0/0:22,0:22:15.02:0,15,203	1/1:16,10:26:3.01:69,3,0	0/0:20,0:26:23.79:0,24,192	1/1:22,2:22:20.95:298,21,0	./.	1/1:12,0:11:2.96:19,3,0	./.	0/0:18,0:16:0:0,0,0	0/0:24,0:24:20.90:0,21,228	0/0:23,0:22:11.86:0,12,106	0/0:18,0:17:20.90:0,21,176	0/0:20,0:20:29.87:0,30,311	0/1:23,0:22:8.51:9,0,58	1/1:26,0:25:5.24:21,5,0	./.
chr10	99887410	.	TCTATCTATCTACCTAC	T	94.64	PASS	AB=1.000;AC=8;AF=0.154;AN=52;BaseQRankSum=2.894;DP=636;FS=11.799;HRun=0;HaplotypeScore=229.7690;InbreedingCoeff=0.2639;MQ=39.91;MQ0=96;MQRankSum=-1.577;QD=0.56;ReadPosRankSum=-5.019;VQSLOD=0.4611;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:6,13:16:3.57:112,4,0	0/0:11,0:11:30.10:0,30,710	./.	./.	0/0:24,0:18:33.11:0,33,1385	0/0:25,0:17:27.08:0,27,1334	0/0:18,0:11:8.98:0,9,73	0/1:34,0:15:0.89:1,0,364	1/1:4,0:4:5.19:27,5,0	0/0:44,0:37:99:0,105,4681	0/0:25,0:23:54.16:0,54,2497	0/0:15,0:13:18.46:0,18,413	0/0:12,0:8:10.24:0,10,103	0/0:23,0:21:39.03:0,39,1905	0/0:26,0:21:13.09:0,13,906	0/0:28,0:24:60.14:0,60,2921	0/0:25,0:22:3.63:0,4,1352	0/0:5,0:3:3:0,3,29	0/1:20,0:12:3.93:4,0,590	0/1:51,0:49:24.84:25,0,2518	0/0:28,0:16:23.38:0,23,453	0/0:18,0:16:36.12:0,36,1042	0/0:15,0:9:18.03:0,18,386	0/0:14,0:9:7.19:0,7,179	0/0:24,0:20:51.16:0,51,2237	0/0:42,0:29:21.15:0,21,3076	0/1:40,0:31:42.76:43,0,1354	0/0:36,0:26:54.18:0,54,2292
chr10	99887455	.	T	TTATC	3974.85	PASS	AB=0.858;AC=17;AF=0.340;AN=50;BaseQRankSum=-7.021;DP=653;FS=2.414;HRun=0;HaplotypeScore=129.2733;InbreedingCoeff=0.0650;MQ=41.29;MQ0=103;MQRankSum=1.653;QD=12.19;ReadPosRankSum=-0.598;VQSLOD=2.8597;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:16,5:21:99:296,0,498	./.	./.	0/1:24,15:36:99:778,0,288	0/1:28,4:24:26.29:597,0,26	0/0:7,0:5:15:0,15,186	0/0:30,0:9:2.99:0,3,24	0/1:11,6:16:99:382,0,330	0/0:38,0:31:69.20:0,69,981	0/0:22,0:20:42.09:0,42,566	0/1:21,1:20:31.70:32,0,396	1/1:13,5:13:17.57:403,18,0	0/0:20,0:18:15.05:0,15,233	0/1:23,3:20:99:167,0,387	0/0:19,0:14:21.05:0,21,283	0/1:25,1:23:3.38:3,0,236	0/1:2,0:3:0.89:59,0,1	0/1:21,0:11:57.90:58,0,92	0/0:49,0:44:47.74:0,48,409	0/1:24,0:14:3.35:3,0,168	0/1:28,11:36:99:674,0,770	1/1:8,5:8:12.04:282,12,0	1/1:14,2:12:12.04:240,12,0	0/0:17,0:15:30.07:0,30,400	0/0:43,0:29:41.98:0,42,393	0/0:27,0:21:14.93:0,15,127	0/0:36,0:26:12.01:0,12,112
chr10	99887489	.	AT	A	371.44	PASS	AB=0.778;AC=8;AF=0.154;AN=52;BaseQRankSum=8.253;DP=622;FS=0.000;HRun=1;HaplotypeScore=114.3423;InbreedingCoeff=0.3160;MQ=43.74;MQ0=79;MQRankSum=-0.229;QD=2.60;ReadPosRankSum=5.454;VQSLOD=-0.5135;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:6:2.93:0,3,40	0/0:26,0:26:72.22:0,72,1038	./.	./.	0/0:38,0:38:79.45:0,79,1008	0/0:30,0:21:39.86:0,40,407	0/0:10,0:7:15.05:0,15,240	0/0:26,0:2:5.37:0,5,35	0/0:18,0:17:48.13:0,48,647	0/0:37,0:33:99:0,99,1540	0/0:23,0:20:55.43:0,55,845	0/0:27,0:24:51.17:0,51,780	0/0:17,0:13:21.93:0,22,238	0/0:17,0:15:30.10:0,30,459	0/0:26,0:23:60.19:0,60,880	0/0:18,0:15:33.11:0,33,511	0/0:25,0:19:40.02:0,40,594	0/0:11,0:10:8.70:0,9,93	0/1:10,3:10:18.73:19,0,194	1/1:18,21:32:8.60:201,9,0	0/1:18,8:13:26.11:65,0,26	0/0:49,0:44:99:0,114,1573	0/0:17,0:16:36.07:0,36,430	0/0:20,0:13:15.04:0,15,194	0/0:21,0:18:43.39:0,43,651	0/1:17,12:22:99:100,0,221	1/1:11,6:11:13.51:63,14,0	0/1:15,4:11:48.66:60,0,49
chr10	99887491	.	CTAT	C	1025.28	PASS	AB=0.820;AC=9;AF=0.173;AN=52;BaseQRankSum=5.841;DP=621;FS=1.170;HRun=0;HaplotypeScore=129.8733;InbreedingCoeff=0.3319;MQ=43.94;MQ0=75;MQRankSum=-1.534;QD=6.18;ReadPosRankSum=5.337;VQSLOD=2.6489;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:6:6.02:0,6,78	0/0:26,0:26:72.24:0,72,1495	./.	./.	0/0:38,0:38:72.56:0,73,1516	0/0:30,0:22:23.91:0,24,580	0/0:10,0:7:15.05:0,15,369	0/1:25,0:2:1.05:1,0,12	0/0:19,0:18:48.16:0,48,1000	0/0:38,0:34:99:0,102,2111	0/0:23,0:20:48.48:0,48,1137	0/0:27,0:24:57.19:0,57,1162	0/0:17,0:14:24.08:0,24,426	0/0:16,0:15:30.10:0,30,565	0/0:26,0:23:60.20:0,60,1239	0/0:18,0:15:31.96:0,32,671	0/0:26,0:21:45.15:0,45,782	0/0:11,0:10:8.96:0,9,119	0/1:11,3:11:60.21:60,0,201	1/1:19,21:32:36.32:452,36,0	0/1:18,8:13:52.90:155,0,53	0/0:49,0:44:99:0,114,2283	0/0:17,0:16:36.12:0,36,532	0/0:20,0:13:15.05:0,15,293	0/0:20,0:18:36.44:0,36,842	0/1:16,12:22:99:266,0,192	1/1:10,6:10:14.99:133,15,0	0/1:13,4:11:40.86:101,0,41
chr10	99887566	.	TCTATCTACCTAC	T	213.72	PASS	AB=1.000;AC=8;AF=0.154;AN=52;BaseQRankSum=3.178;DP=633;FS=2.440;HRun=0;HaplotypeScore=151.1948;InbreedingCoeff=0.4763;MQ=40.54;MQ0=105;MQRankSum=-2.789;QD=3.24;ReadPosRankSum=-2.136;VQSLOD=1.7531;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:7:0.93:30,1,0	0/0:16,0:16:39.11:0,39,1709	./.	./.	0/0:16,0:16:18.06:0,18,705	0/1:14,0:10:99:113,0,193	0/0:18,0:8:15.02:0,15,302	0/0:44,0:4:6.80:0,7,62	1/1:3,0:3:5.99:71,6,0	0/0:34,0:31:84.26:0,84,2884	0/0:29,0:25:51.09:0,51,1312	0/0:29,0:26:35.09:0,35,1858	0/0:18,0:16:27.09:0,27,988	0/0:17,0:14:33.11:0,33,940	0/0:29,0:27:39.09:0,39,1737	0/0:20,0:17:26.67:0,27,779	0/0:27,0:25:49.63:0,50,2088	1/1:0,9:9:3.01:108,3,0	0/0:26,0:13:21.68:0,22,514	0/0:42,0:32:34.63:0,35,899	0/1:30,0:10:15.74:16,0,50	0/0:42,0:40:76.55:0,77,3724	0/0:36,0:31:69.17:0,69,2762	0/0:18,0:14:20.72:0,21,977	0/0:20,0:14:17.52:0,18,314	0/0:33,0:19:16.68:0,17,987	0/0:29,0:17:20.08:0,20,506	0/0:14,0:6:12.04:0,12,221
chr10	99887607	.	TTATC	T	4481.41	PASS	AB=0.885;AC=26;AF=0.650;AN=40;BaseQRankSum=3.513;DP=649;FS=1.177;HRun=0;HaplotypeScore=98.3498;InbreedingCoeff=0.0883;MQ=42.28;MQ0=110;MQRankSum=-1.700;QD=10.33;ReadPosRankSum=0.142;VQSLOD=3.6302;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:6:12.62:147,13,0	./.	./.	./.	./.	1/1:16,0:12:3.71:30,4,0	./.	0/1:44,0:10:0:0,0,0	./.	0/0:48,1:41:38.33:0,38,1540	0/0:35,0:31:45.13:0,45,838	0/1:23,7:27:99:400,0,196	0/1:17,10:25:99:521,0,105	1/1:13,5:16:27.06:352,27,0	0/0:21,0:25:3.01:0,3,48	./.	1/1:17,5:21:24:309,24,0	1/1:4,0:4:3:28,3,0	1/1:24,0:12:12.02:150,12,0	0/1:50,0:41:99:447,0,263	1/1:22,0:7:6.02:86,6,0	./.	0/1:30,4:31:99:221,0,453	1/1:15,3:15:9.03:136,9,0	0/1:14,17:25:99:459,0,153	0/1:38,0:26:3.05:529,0,3	0/1:30,0:20:99:347,0,116	1/1:17,0:10:21.07:319,21,0
chr10	99887687	.	TTATC	T	4296.76	PASS	AB=0.790;AC=20;AF=0.385;AN=52;BaseQRankSum=8.657;DP=687;FS=0.000;HRun=0;HaplotypeScore=140.7971;InbreedingCoeff=0.6660;MQ=47.63;MQ0=65;MQRankSum=2.396;QD=14.71;ReadPosRankSum=1.763;VQSLOD=4.2347;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,1:17:7.96:8,0,756	0/0:11,0:11:26.93:0,27,633	./.	./.	0/0:20,0:17:30.02:0,30,665	0/1:13,0:26:49.04:184,0,49	0/0:12,0:10:24.08:0,24,568	0/0:38,0:20:15.01:0,15,213	0/0:4,0:16:22.66:0,23,74	0/0:54,0:48:81.23:0,81,1755	0/0:27,0:27:51.16:0,51,1155	1/1:16,21:36:45.14:686,45,0	1/1:10,15:25:36.12:564,36,0	1/1:11,11:21:27.09:423,27,0	0/0:29,0:27:57.18:0,57,1299	1/1:17,10:24:33.11:517,33,0	0/0:31,0:32:54.02:0,54,1121	0/1:4,0:12:24.77:66,0,25	0/1:30,1:17:13.90:14,0,661	0/0:32,0:27:40.21:0,40,1330	0/0:13,0:7:18.06:0,18,421	1/1:6,21:25:54.18:847,54,0	1/1:16,9:21:26.76:423,27,0	1/1:6,6:11:5.98:94,6,0	0/0:29,0:27:45.15:0,45,1061	0/0:31,0:28:75.25:0,75,1720	0/0:29,0:25:57.20:0,57,1328	1/1:11,10:20:30.10:470,30,0
chr10	99887956	.	C	CT	463.94	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.774;DP=714;FS=3.773;HRun=10;HaplotypeScore=95.4653;InbreedingCoeff=0.8961;MQ=65.32;MQ0=1;MQRankSum=0.300;QD=17.18;ReadPosRankSum=-1.031;VQSLOD=3.6135;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:46:97.14:0,97,914	0/0:7,0:7:14.98:0,15,123	0/0:12,0:12:18.78:0,19,116	0/0:11,0:10:7.63:0,8,53	0/0:34,1:35:48.86:0,49,602	1/1:9,18:27:54.04:559,54,0	0/0:16,0:17:43.98:0,44,351	0/0:36,3:39:19.84:0,20,572	0/0:24,0:24:59.96:0,60,474	0/0:42,0:43:99:0,104,843	0/0:37,0:39:99:0,100,796	0/0:24,0:24:68.86:0,69,558	0/0:25,0:27:48.03:0,48,473	0/0:18,0:18:32.95:0,33,290	0/0:29,0:31:70.85:0,71,569	0/0:38,0:38:95.87:0,96,788	0/0:26,0:28:63.47:0,63,485	0/0:13,0:13:26.90:0,27,218	0/0:20,1:20:18.93:0,19,360	0/0:33,0:33:77.87:0,78,640	0/0:16,0:16:35.91:0,36,292	0/0:25,0:25:65.89:0,66,539	0/0:15,0:15:41.93:0,42,344	0/0:19,0:19:25.80:0,26,347	0/0:28,0:28:53.87:0,54,443	0/0:34,0:36:87.94:0,88,701	0/0:31,0:31:65.88:0,66,539	0/0:10,0:10:26.96:0,27,222
chr10	99888468	.	GA	G	686.44	PASS	AB=0.777;AC=6;AF=0.107;AN=56;BaseQRankSum=8.407;DP=574;FS=5.483;HRun=12;HaplotypeScore=74.9417;InbreedingCoeff=0.3922;MQ=81.77;MQ0=2;MQRankSum=1.307;QD=5.24;ReadPosRankSum=2.562;VQSLOD=2.0733;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:28:41.09:373,41,0	0/0:13,0:14:35.82:0,36,331	0/0:27,0:15:21.97:0,22,158	0/1:34,0:29:14.13:14,0,76	0/1:26,3:30:0.94:1,0,486	0/0:21,1:25:29.84:0,30,490	0/0:20,0:20:45.05:0,45,437	0/0:25,0:26:20.25:0,20,349	0/1:5,14:21:14.96:244,0,15	0/0:25,2:27:24.76:0,25,586	0/0:26,1:27:33.67:0,34,480	0/0:17,0:17:40.56:0,41,379	0/0:12,0:12:30.06:0,30,304	0/0:6,0:7:17.87:0,18,166	0/0:15,1:16:12.84:0,13,312	0/0:17,0:17:45.09:0,45,457	0/0:12,1:13:9.81:0,10,273	0/1:7,10:17:0.60:176,0,1	0/0:23,2:28:14.04:0,14,394	0/0:20,0:20:57.10:0,57,572	0/0:17,0:17:45.07:0,45,446	0/0:13,1:16:12.50:0,12,274	0/0:16,0:20:42.37:0,42,397	0/0:17,0:17:42.08:0,42,426	0/0:13,0:14:29.88:0,30,277	0/0:28,1:32:37.87:0,38,598	0/0:16,0:17:38.91:0,39,380	0/0:13,1:14:6.49:0,6,218
chr10	99888764	.	A	ATT	3093.26	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-4.744;DP=632;FS=4.277;HRun=13;HaplotypeScore=104.7836;InbreedingCoeff=0.9868;MQ=66.92;MQ0=1;MQRankSum=-2.443;QD=19.83;ReadPosRankSum=-5.821;VQSLOD=1.3906;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:84.78:0,85,356	0/0:13,0:16:29.28:0,29,275	0/0:18,0:17:11.30:0,11,138	0/0:24,0:23:27.38:0,27,178	0/0:24,0:25:50.57:0,51,432	0/0:22,0:23:52.34:0,52,458	0/0:18,0:20:32.48:0,32,320	1/1:7,14:25:51.55:601,52,0	0/0:20,0:20:27.37:0,27,115	0/0:31,0:31:61.37:0,61,531	0/0:12,0:12:21.79:0,22,226	0/0:20,0:24:34.80:0,35,340	0/0:13,0:16:26.87:0,27,237	0/0:21,0:22:44.81:0,45,390	0/0:23,0:25:40.63:0,41,335	0/0:20,0:22:44.46:0,44,368	0/0:24,0:26:47.42:0,47,452	0/0:18,0:18:45.57:0,46,188	1/1:12,12:25:15.20:397,15,0	1/1:6,12:22:21.05:467,21,0	1/1:7,13:26:45.58:474,46,0	0/0:15,0:17:41.37:0,41,336	0/0:18,0:21:35.17:0,35,331	0/0:26,0:27:59.75:0,60,572	0/0:19,0:20:44.62:0,45,381	1/1:8,14:24:47.60:570,48,0	1/1:5,18:27:47.59:582,48,0	1/1:0,4:7:17.54:200,18,0
chr10	99888774	.	TTTTC	T	2963.63	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.113;DP=639;FS=1.035;HRun=0;HaplotypeScore=119.7193;InbreedingCoeff=0.9968;MQ=69.50;MQ0=1;MQRankSum=-3.122;QD=36.14;ReadPosRankSum=5.402;VQSLOD=3.5259;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,45:45:96.18:1661,96,0	0/0:15,0:15:45.14:0,45,1033	0/0:24,0:21:55.38:0,55,756	0/0:23,0:23:52.80:0,53,820	0/0:30,0:30:87.13:0,87,1746	0/0:27,0:27:81.20:0,81,1750	0/0:19,0:19:55.31:0,55,1187	0/0:22,0:22:61.07:0,61,1076	1/1:0,18:18:30.10:535,30,0	0/0:31,0:31:93.24:0,93,1995	0/0:13,0:13:36.11:0,36,839	0/0:26,0:26:78.22:0,78,1576	0/0:14,0:14:36.12:0,36,915	0/0:22,0:22:66.14:0,66,1423	0/0:21,0:21:63.16:0,63,1361	0/0:18,0:18:54.16:0,54,1211	0/0:31,0:31:93.18:0,93,1917	1/1:0,18:18:54.14:910,54,0	0/0:26,0:26:52.01:0,52,1367	0/0:24,0:24:72.22:0,72,1366	0/0:23,0:23:60.17:0,60,1163	0/0:21,0:21:60.18:0,60,1274	0/0:20,0:20:60.18:0,60,1284	0/0:27,0:27:81.25:0,81,1953	0/0:19,0:19:57.17:0,57,1304	0/0:26,0:26:78.22:0,78,1311	0/0:27,0:27:57.15:0,57,1105	0/0:7,0:7:18.06:0,18,395
chr10	99889175	.	ACTAT	A	2554.57	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.483;DP=771;FS=1.857;HRun=0;HaplotypeScore=127.6566;InbreedingCoeff=0.9977;MQ=91.11;MQ0=0;MQRankSum=-3.963;QD=48.20;ReadPosRankSum=2.821;VQSLOD=4.3315;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,151,3960	0/0:13,0:13:39.13:0,39,1008	0/0:37,0:37:99:0,108,2747	0/0:27,0:27:81.26:0,81,2012	0/0:17,0:17:48.16:0,48,1290	0/0:19,0:19:57.20:0,57,1539	0/0:24,0:24:69.22:0,69,1771	0/0:37,0:37:99:0,99,2641	1/1:1,39:40:99:2050,108,0	0/0:34,0:34:99:0,99,2669	0/0:20,0:20:57.20:0,57,1535	0/0:34,0:34:96.33:0,96,2584	0/0:28,0:28:81.28:0,81,2180	0/0:31,0:31:93.32:0,93,2470	0/0:37,0:37:99:0,108,2821	0/0:24,0:24:69.24:0,69,1862	0/0:27,0:27:81.28:0,81,2149	1/1:2,11:13:33.11:627,33,0	0/0:26,0:26:69.22:0,69,1766	0/0:15,0:15:45.15:0,45,1214	0/0:58,0:58:99:0,168,4319	0/0:25,0:25:72.23:0,72,1874	0/0:20,0:20:60.21:0,60,1580	0/0:26,0:26:75.26:0,75,2002	0/0:27,0:27:81.28:0,81,2115	0/0:30,0:30:87.28:0,87,2242	0/0:25,0:25:75.24:0,75,1933	0/0:7,0:7:21.07:0,21,567
chr10	99890195	.	G	GTA	5355.95	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-12.128;DP=666;FS=2.461;HRun=0;HaplotypeScore=80.2196;InbreedingCoeff=0.9992;MQ=75.98;MQ0=0;MQRankSum=-2.762;QD=53.56;ReadPosRankSum=4.125;VQSLOD=5.7719;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,49:49:99:2616,129,0	0/0:14,0:14:42.13:0,42,657	0/0:19,0:18:48.06:0,48,745	0/0:20,0:20:44.30:0,44,687	0/0:25,0:25:75.22:0,75,1159	0/0:23,0:22:69.20:0,69,1068	0/0:18,0:18:54.18:0,54,878	0/0:25,0:25:75.21:0,75,1105	1/1:1,23:24:63.22:1278,63,0	0/0:30,0:30:86.94:0,87,1335	0/0:25,0:25:72.23:0,72,1137	0/0:20,0:20:60.16:0,60,903	0/0:12,0:12:36.12:0,36,581	0/0:30,0:30:84.17:0,84,1197	0/0:28,0:28:78.21:0,78,1205	0/0:22,0:22:60.20:0,60,970	0/0:23,0:23:69.24:0,69,1114	1/1:1,26:27:72.25:1461,72,0	0/0:19,0:19:57.16:0,57,849	0/0:24,0:24:69.06:0,69,1032	0/0:31,0:31:90.25:0,90,1426	0/0:27,0:27:81.26:0,81,1289	0/0:20,0:20:57.19:0,57,915	0/0:29,0:29:87.24:0,87,1359	0/0:18,0:18:54.18:0,54,871	0/0:30,0:30:87.27:0,87,1350	0/0:26,0:26:78.21:0,78,1175	0/0:8,0:8:24.08:0,24,381
chr10	99891113	.	GGT	G	411.69	PASS	AB=0.938;AC=19;AF=0.396;AN=48;BaseQRankSum=5.960;DP=598;FS=0.000;HRun=0;HaplotypeScore=79.0721;InbreedingCoeff=-0.3093;MQ=64.93;MQ0=10;MQRankSum=-0.693;QD=1.01;ReadPosRankSum=1.237;VQSLOD=1.1455;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:28:11.51:12,0,144	0/0:10,0:11:3.90:0,4,188	./.	./.	./.	1/1:11,2:16:15.95:129,16,0	0/1:31,1:31:5.57:6,0,277	0/0:25,0:23:6:0,6,65	1/1:14,0:24:12.81:83,13,0	0/1:22,1:23:17.52:18,0,121	0/1:16,1:17:21.06:21,0,105	0/1:22,2:24:8.55:9,0,266	0/1:22,0:21:8.13:8,0,179	0/1:14,3:17:14.60:15,0,168	0/0:19,0:18:12.01:0,12,139	0/1:15,1:15:14.56:15,0,205	0/1:31,2:34:45.34:45,0,396	0/1:18,0:22:15.13:42,0,15	0/0:16,0:15:6.02:0,6,87	0/1:14,1:15:20.58:21,0,118	0/1:51,0:50:4.94:5,0,257	0/1:22,3:25:47.19:47,0,127	./.	0/1:27,3:30:67.95:68,0,279	0/0:18,0:20:13.23:0,13,315	0/1:8,0:8:18.26:18,0,37	0/0:23,0:22:21.50:0,22,271	0/0:6,0:6:12.02:0,12,137
chr10	99892339	.	A	AAC	13651.67	PASS	AB=0.535;AC=19;AF=0.339;AN=56;BaseQRankSum=20.175;DP=757;FS=9.201;HRun=0;HaplotypeScore=134.3847;InbreedingCoeff=0.9115;MQ=86.45;MQ0=3;MQRankSum=-9.592;QD=47.40;ReadPosRankSum=0.850;VQSLOD=5.1073;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,34:41:99:1792,105,0	0/0:14,0:14:39.13:0,39,557	0/0:32,0:32:33.74:0,34,1118	0/0:28,0:27:73.23:0,73,995	0/0:27,0:27:81.27:0,81,1159	0/0:36,0:35:99:0,99,1418	0/0:28,0:28:84.27:0,84,1186	1/1:6,31:37:99:1858,108,0	1/1:5,31:36:93.25:1665,93,0	0/0:23,0:23:69.23:0,69,982	0/0:28,0:28:84.28:0,84,1203	0/0:22,0:22:66.20:0,66,927	0/0:27,0:27:81.26:0,81,1139	0/0:20,0:20:60.20:0,60,860	0/0:19,0:19:54.18:0,54,774	0/0:20,1:21:8.46:0,8,805	0/0:36,0:36:99:0,102,1461	1/1:1,12:13:36.12:639,36,0	1/1:5,12:17:45.12:724,45,0	1/1:1,37:39:99:1938,111,0	1/1:2,29:32:81.28:1467,81,0	0/0:25,0:25:75.24:0,75,1058	0/0:22,0:22:60.20:0,60,860	0/0:35,0:35:99:0,105,1503	0/0:25,0:25:75.25:0,75,1073	0/1:3,20:23:19.78:1001,0,20	1/1:2,34:36:99:1799,99,0	1/1:1,13:14:42.14:769,42,0
chr10	99893170	.	TGGG	T	7033.69	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=1.187;DP=507;FS=7.052;HRun=11;HaplotypeScore=87.8618;InbreedingCoeff=0.9586;MQ=83.01;MQ0=0;MQRankSum=-3.738;QD=29.31;ReadPosRankSum=5.464;VQSLOD=3.8009;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,24:31:60.16:788,60,0	0/0:5,0:5:9.02:0,9,125	0/0:27,0:23:47.15:0,47,514	0/0:20,0:16:30.89:0,31,315	0/0:6,0:8:21.03:0,21,349	1/1:2,27:29:66.19:866,66,0	0/0:32,0:39:86.44:0,86,1523	1/1:7,27:35:78.14:1002,78,0	1/1:1,14:15:36.11:473,36,0	0/0:7,0:7:6.02:0,6,105	0/0:9,0:10:15.03:0,15,231	0/0:4,0:16:32.90:0,33,273	0/0:6,0:23:38.82:0,39,306	0/0:6,0:8:18.02:0,18,271	0/0:14,0:15:33.09:0,33,606	0/0:10,0:11:21.05:0,21,369	0/0:20,0:25:66.14:0,66,1183	1/1:0,19:19:45.15:591,45,0	1/1:2,15:17:45.10:559,45,0	1/1:3,12:15:36.11:473,36,0	1/1:5,23:28:54.02:710,54,0	0/0:12,0:13:24.06:0,24,412	0/0:11,0:11:12.02:0,12,172	0/0:12,0:16:34.74:0,35,554	0/0:12,0:13:9.02:0,9,144	1/1:5,15:21:46.67:627,47,0	1/1:2,21:23:51.14:670,51,0	1/1:0,7:7:21.07:276,21,0
chr10	99893629	.	AGAG	A	3681.01	PASS	AB=0.735;AC=16;AF=0.286;AN=56;BaseQRankSum=7.382;DP=565;FS=8.703;HRun=0;HaplotypeScore=119.2994;InbreedingCoeff=0.4588;MQ=52.80;MQ0=9;MQRankSum=-1.530;QD=17.96;ReadPosRankSum=1.233;VQSLOD=3.1110;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,11:24:32:468,32,0	0/0:8,0:8:15.71:0,16,324	0/0:34,0:12:13.96:0,14,242	0/0:52,0:14:13.59:0,14,204	0/0:8,0:8:12.64:0,13,303	0/0:15,0:18:41.49:0,41,634	0/0:35,0:33:44.76:0,45,911	0/1:21,3:19:32.95:252,0,33	1/1:6,16:22:36.39:679,36,0	0/0:20,0:20:23.71:0,24,576	0/1:14,0:17:5.15:5,0,227	0/0:14,0:14:10:0,10,322	0/0:15,0:15:30.92:0,31,549	0/0:11,0:11:13.84:0,14,320	0/0:14,0:14:23.47:0,23,523	0/0:21,0:20:31.94:0,32,634	0/0:25,0:24:39.13:0,39,774	1/1:8,12:20:31.09:503,31,0	1/1:10,3:12:21.06:278,21,0	0/1:6,8:16:99:176,0,109	1/1:4,5:9:12.04:174,12,0	0/0:16,0:17:13.76:0,14,517	0/0:18,0:18:14.64:0,15,393	0/0:26,0:26:54.90:0,55,1137	0/0:22,0:23:29.20:0,29,710	0/1:11,13:27:24.72:554,0,25	0/1:7,12:20:54.93:399,0,55	0/1:5,4:9:29.45:194,0,29
chr10	99893700	.	A	AG	424.25	PASS	AB=0.766;AC=12;AF=0.222;AN=54;BaseQRankSum=3.263;DP=241;FS=5.612;HRun=0;HaplotypeScore=55.9534;InbreedingCoeff=-0.0269;MQ=36.83;MQ0=3;MQRankSum=-0.686;QD=4.99;ReadPosRankSum=-0.981;VQSLOD=2.4741;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:5,6:11:89.67:90,0,103	0/0:2,0:2:6.02:0,6,83	0/0:6,0:4:9.03:0,9,111	./.	0/0:4,0:4:12.04:0,12,167	0/0:14,0:14:39.09:0,39,517	0/0:9,0:8:18.06:0,18,244	0/0:16,0:15:7.46:0,7,361	0/1:13,3:16:58.61:59,0,449	0/0:13,0:13:39.09:0,39,522	0/0:8,0:7:21.07:0,21,292	0/0:11,0:11:30.10:0,30,409	0/0:10,1:11:27.58:0,28,406	0/0:3,0:3:6.02:0,6,83	0/0:8,2:10:24.03:0,24,332	0/0:10,1:11:30.10:0,30,416	0/0:15,1:16:8.61:0,9,541	0/1:5,3:8:99:113,0,146	0/1:3,2:5:35.58:36,0,113	0/1:6,1:7:11.29:11,0,190	1/1:1,2:3:3.01:46,3,0	0/0:10,0:10:30.09:0,30,400	1/1:0,1:1:2.90:16,3,0	0/0:5,0:5:12.01:0,12,140	0/0:3,0:3:3.01:0,3,41	0/1:14,3:17:91.65:92,0,495	0/1:12,2:13:42.88:43,0,404	0/1:1,2:3:32.81:63,0,33
chr10	99896369	.	T	TA	1757.21	PASS	AB=0.730;AC=15;AF=0.268;AN=56;BaseQRankSum=-3.186;DP=539;FS=1.434;HRun=14;HaplotypeScore=67.6965;InbreedingCoeff=0.6194;MQ=72.41;MQ0=2;MQRankSum=0.511;QD=8.61;ReadPosRankSum=-2.422;VQSLOD=2.2747;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,2:31:37.29:204,37,0	0/0:9,0:11:27.72:0,28,165	0/0:23,0:11:3.95:0,4,57	0/0:23,1:15:9.14:0,9,74	0/0:15,0:15:38.41:0,38,250	0/0:5,0:24:35.52:0,36,113	0/0:16,0:16:41.28:0,41,262	1/1:7,15:25:34.03:368,34,0	0/0:15,0:15:26.43:0,26,172	0/0:9,0:9:17.71:0,18,115	0/0:14,0:14:29.51:0,30,191	0/0:17,0:20:38.48:0,38,226	0/0:18,0:18:29.37:0,29,192	0/0:16,0:18:39.53:0,40,242	0/0:20,0:20:38.24:0,38,246	0/0:17,0:20:45.40:0,45,279	0/0:21,0:20:52.57:0,53,332	0/1:20,2:22:2.53:3,0,235	1/1:10,5:16:23.10:216,23,0	1/1:9,19:30:19.15:365,19,0	0/1:6,5:11:10.27:44,0,10	0/0:20,3:24:16.94:0,17,226	0/0:13,0:13:4.50:0,4,97	0/0:14,3:17:0.14:0,0,127	0/0:11,0:12:26.44:0,26,169	1/1:7,16:24:1.65:252,2,0	0/1:8,18:27:40.63:265,0,41	1/1:4,14:18:10.73:218,11,0
chr10	99896543	.	G	GTT	458.26	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.576;DP=541;FS=0.912;HRun=3;HaplotypeScore=79.8597;InbreedingCoeff=0.9292;MQ=68.10;MQ0=0;MQRankSum=-2.811;QD=13.48;ReadPosRankSum=-1.850;VQSLOD=-0.0030;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,110,1445	0/0:8,0:8:24.08:0,24,335	0/0:17,0:15:26.68:0,27,355	0/0:10,0:7:4.62:0,5,104	0/0:25,0:25:69.22:0,69,947	0/0:19,0:19:57.19:0,57,797	0/0:16,0:16:42.61:0,43,587	0/0:39,0:39:99:0,108,1457	1/1:4,9:14:18.90:245,19,0	0/0:26,0:26:72.23:0,72,992	0/0:17,0:17:45.15:0,45,622	0/0:14,0:14:42.14:0,42,582	0/0:26,0:26:75.23:0,75,1031	0/0:21,0:21:60.20:0,60,838	0/0:18,0:18:54.17:0,54,736	0/0:14,0:14:41.17:0,41,551	0/0:24,0:24:72.24:0,72,987	1/1:2,14:20:27.73:333,28,0	0/0:19,0:19:57.18:0,57,779	0/0:15,0:15:42.14:0,42,585	0/0:14,0:14:39.13:0,39,542	0/0:12,0:12:33.11:0,33,459	0/0:15,0:15:42.14:0,42,575	0/0:16,0:16:48.07:0,48,646	0/0:22,0:22:60.19:0,60,822	0/0:24,0:24:72.23:0,72,976	0/0:19,0:19:57.19:0,57,790	0/0:15,0:15:39.13:0,39,544
chr10	99896547	.	GT	G	866.10	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.621;DP=539;FS=8.834;HRun=9;HaplotypeScore=64.0366;InbreedingCoeff=0.7629;MQ=66.80;MQ0=0;MQRankSum=1.522;QD=21.12;ReadPosRankSum=2.056;VQSLOD=4.3853;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,37:41:99:961,105,0	0/0:9,0:9:24.07:0,24,277	0/0:17,0:15:32.58:0,33,352	0/0:11,0:8:1.38:0,1,74	0/0:23,0:23:66.19:0,66,753	0/0:22,0:22:66.18:0,66,752	0/0:18,0:18:51.15:0,51,588	0/0:37,0:37:93.26:0,93,1064	0/0:12,0:12:7.46:0,7,51	0/0:24,0:24:69.21:0,69,796	0/0:15,0:15:36.08:0,36,392	0/0:15,0:15:36.08:0,36,396	0/0:24,0:24:72.21:0,72,831	0/0:21,0:21:63.17:0,63,718	0/0:18,0:18:48.14:0,48,554	0/0:13,0:14:35.94:0,36,395	0/0:23,1:24:29.79:0,30,596	0/0:20,0:20:25.57:0,26,128	0/0:19,0:19:39.09:0,39,425	0/0:14,0:14:42.11:0,42,468	0/0:13,0:13:30.08:0,30,338	0/0:13,0:13:33.09:0,33,370	0/0:16,0:16:38.78:0,39,426	0/0:17,0:17:51.14:0,51,579	0/0:20,1:21:35.73:0,36,665	0/0:25,0:25:72.21:0,72,831	0/0:21,0:21:52.38:0,52,579	0/0:15,0:15:36.11:0,36,415
chr10	99897816	.	A	AATCC	6688	PASS	AB=0.917;AC=7;AF=0.125;AN=56;BaseQRankSum=-8.353;DP=704;FS=7.925;HRun=0;HaplotypeScore=108.8615;InbreedingCoeff=0.8356;MQ=83.23;MQ0=0;MQRankSum=-4.362;QD=55.73;ReadPosRankSum=2.148;VQSLOD=6.4724;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,37:42:99:2964,108,0	0/0:7,0:7:21:0,21,309	0/0:23,0:23:66.21:0,66,1190	0/0:22,0:22:48.20:0,48,1082	0/0:22,0:22:63.22:0,63,1244	0/0:15,0:15:42.13:0,42,793	0/0:23,0:23:66.21:0,66,1253	0/0:37,0:37:99:0,108,1947	1/1:6,22:31:72.25:1940,72,0	0/0:23,0:23:66.23:0,66,1315	0/0:18,0:18:48.16:0,48,938	0/0:31,0:31:90.31:0,90,1770	0/0:22,0:22:63.20:0,63,1208	0/0:26,0:26:72.25:0,72,1424	0/0:33,0:33:99:0,99,1968	0/1:20,2:22:99:101,0,1107	0/0:34,0:34:99:0,99,1909	1/1:6,18:24:63.22:1683,63,0	0/0:23,0:23:66.17:0,66,1186	0/0:25,0:25:72.22:0,72,1367	0/0:32,0:32:84.29:0,84,1651	0/0:25,0:25:75.26:0,75,1488	0/0:19,0:19:54.19:0,54,1075	0/0:38,0:38:99:0,108,2154	0/0:20,0:20:57.20:0,57,1137	0/0:26,0:26:78.27:0,78,1521	0/0:24,0:24:72.25:0,72,1438	0/0:16,0:16:48.16:0,48,929
chr10	99898223	.	T	TTTA	1294.83	PASS	AB=1.000;AC=15;AF=0.357;AN=42;BaseQRankSum=-0.490;DP=286;FS=3.066;HRun=0;HaplotypeScore=56.6678;InbreedingCoeff=0.6028;MQ=61.76;MQ0=2;MQRankSum=-2.193;QD=10.12;ReadPosRankSum=-1.975;VQSLOD=2.0991;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,14:30:33.11:629,33,0	0/0:3,0:3:3.01:0,3,39	./.	./.	0/0:7,0:7:6.02:0,6,79	1/1:2,0:7:9.03:118,9,0	0/0:6,0:6:6.02:0,6,78	1/1:28,0:28:23.99:240,24,0	0/0:3,0:6:8.93:0,9,63	0/0:6,0:6:3.01:0,3,39	./.	0/1:4,0:4:33.38:50,0,33	0/0:7,0:7:6.02:0,6,79	0/0:4,0:4:2.97:0,3,20	0/0:8,0:9:12.01:0,12,139	0/0:6,0:6:9.03:0,9,118	0/0:21,0:23:36.06:0,36,425	0/0:19,0:22:18.77:0,19,145	1/1:21,0:22:6.02:77,6,0	./.	./.	./.	./.	0/0:4,0:5:9:0,9,100	0/0:12,0:12:9.03:0,9,118	1/1:6,0:6:6.02:72,6,0	1/1:15,0:14:3.48:37,3,0	1/1:16,0:15:18.06:227,18,0
chr10	99898232	.	A	ATTATTG	2488.82	PASS	AB=1.000;AC=17;AF=0.327;AN=52;BaseQRankSum=0.269;DP=270;FS=0.545;HRun=0;HaplotypeScore=60.4709;InbreedingCoeff=0.7317;MQ=58.01;MQ0=2;MQRankSum=-2.154;QD=16.48;ReadPosRankSum=-0.989;VQSLOD=2.4104;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:31.51:32,0,160	0/0:3,0:3:8.99:0,9,115	./.	./.	0/0:5,0:5:12.01:0,12,186	1/1:5,0:5:9.03:233,9,0	0/0:3,0:3:9.01:0,9,159	1/1:31,0:31:62.69:664,63,0	0/0:6,0:6:12.02:0,12,164	0/0:4,0:4:12.02:0,12,152	0/0:5,0:5:11.98:0,12,98	0/0:3,0:3:2.83:0,3,89	0/0:5,0:5:15.01:0,15,193	0/0:3,0:3:9:0,9,86	0/0:8,0:8:23.97:0,24,348	0/0:4,0:4:12.03:0,12,231	0/0:23,0:23:63.05:0,63,982	0/0:21,0:21:43.14:0,43,482	1/1:24,0:24:35.26:487,35,0	1/1:8,0:8:7.71:154,8,0	1/1:7,0:7:11.97:96,12,0	0/0:3,0:3:5.99:0,6,50	0/0:3,0:3:8.99:0,9,75	0/0:4,0:4:12.02:0,12,209	0/0:12,0:12:32.93:0,33,399	1/1:2,4:6:12.01:257,12,0	1/1:1,13:13:8.05:215,8,0	1/1:6,15:28:5.12:535,5,0
chr10	99898655	.	G	GTGACCCGATCTGTCTGTCT	19329.42	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=15.289;DP=642;FS=4.504;HRun=0;HaplotypeScore=318.4255;InbreedingCoeff=0.8717;MQ=87.13;MQ0=0;MQRankSum=-14.893;QD=70.29;ReadPosRankSum=-1.688;VQSLOD=3.8554;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,1:29:18.06:903,18,0	0/0:11,0:11:24.08:0,24,1118	0/0:28,0:28:60.21:0,60,1923	0/0:24,0:24:36.10:0,36,978	0/0:21,0:21:48.16:0,48,2421	1/1:9,0:22:30.05:1724,30,0	0/0:25,0:25:66.20:0,66,2836	1/1:41,0:41:99:3886,108,0	1/1:9,0:22:36.12:2232,36,0	0/0:24,0:24:63.22:0,63,3024	0/0:8,0:8:21.07:0,21,882	0/0:25,0:25:63.22:0,63,2761	0/0:26,0:26:69.24:0,69,3260	0/0:18,0:18:51.16:0,51,2437	0/0:32,0:32:90.31:0,90,4317	0/1:20,0:20:86.70:87,0,2212	0/0:43,0:43:99:0,120,5366	1/1:6,0:16:2.89:655,3,0	1/1:15,0:29:61.72:2188,62,0	1/1:10,0:23:30.10:1977,30,0	1/1:28,0:28:24.97:1309,25,0	0/0:14,0:14:36.12:0,36,1543	0/0:24,0:24:69.22:0,69,2903	0/0:31,0:31:75.22:0,75,3326	0/0:13,0:13:39.13:0,39,2015	1/1:10,0:25:59.30:3045,59,0	1/1:15,0:16:18.06:1102,18,0	1/1:0,0:4:3.01:221,3,0
chr10	99898661	.	C	CGATCTGTCTG	6964.17	PASS	AB=0.964;AC=13;AF=0.232;AN=56;BaseQRankSum=13.455;DP=584;FS=7.833;HRun=0;HaplotypeScore=229.4423;InbreedingCoeff=0.0457;MQ=91.19;MQ0=0;MQRankSum=-12.898;QD=37.64;ReadPosRankSum=4.414;VQSLOD=3.0445;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:51.90:357,0,52	0/0:11,0:11:27.09:0,27,814	0/0:28,0:28:72.25:0,72,1847	0/0:25,0:25:45.09:0,45,1050	0/0:21,0:21:51.18:0,51,1608	0/1:14,0:14:99:819,0,129	0/0:26,0:26:69.20:0,69,2042	0/1:42,0:42:99:1443,0,358	1/1:15,0:15:20.60:996,21,0	0/0:26,0:26:72.24:0,72,2180	0/0:7,0:7:21.07:0,21,626	0/0:24,0:24:63.22:0,63,1925	0/0:24,0:24:69.24:0,69,2171	0/0:17,0:17:51.18:0,51,1639	0/0:33,0:33:99:0,99,3046	0/0:23,0:23:22.68:0,23,1713	0/0:48,0:48:99:0,130,3856	0/1:11,0:11:99:337,0,191	0/1:13,0:13:99:372,0,266	0/1:18,0:18:81.52:911,0,82	0/1:23,0:23:99:387,0,162	0/0:14,0:14:36.12:0,36,1058	0/0:28,0:28:81.26:0,81,2322	0/0:29,0:29:81.24:0,81,2409	0/0:15,0:15:45.15:0,45,1409	0/1:16,0:16:99:718,0,314	0/1:9,5:17:74.31:506,0,74	1/1:1,0:1:3.01:118,3,0
chr10	99898667	.	GA	G	542.88	PASS	AB=0.692;AC=2;AF=0.036;AN=56;BaseQRankSum=2.702;DP=581;FS=3.126;HRun=1;HaplotypeScore=98.2268;InbreedingCoeff=-0.0390;MQ=90.75;MQ0=0;MQRankSum=-3.622;QD=8.35;ReadPosRankSum=-2.911;VQSLOD=0.0287;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:17.98:0,18,256	0/0:10,0:10:27.09:0,27,431	0/0:28,0:28:81.23:0,81,1256	0/0:25,0:25:54.16:0,54,804	0/0:19,0:19:54.18:0,54,863	0/0:13,0:13:32.86:0,33,434	0/0:25,0:25:75.23:0,75,1174	0/1:22,18:40:99:615,0,933	0/0:17,0:17:38.53:0,39,402	0/0:28,0:28:84.29:0,84,1343	0/0:7,0:7:21.07:0,21,335	0/0:21,0:21:63.21:0,63,1007	0/0:25,0:25:72.25:0,72,1151	0/0:21,0:21:63.20:0,63,974	0/0:35,0:35:99:0,105,1655	0/0:23,0:23:69.24:0,69,1101	0/0:48,0:48:99:0,144,2246	0/0:12,0:12:29.93:0,30,417	0/0:15,0:15:45.07:0,45,680	0/0:17,0:17:26.66:0,27,277	0/1:14,11:25:12.22:12,0,396	0/0:13,0:13:39.13:0,39,621	0/0:29,0:29:87.28:0,87,1353	0/0:28,0:28:84.23:0,84,1271	0/0:15,0:15:45.15:0,45,720	0/0:16,0:16:47.82:0,48,643	0/0:10,0:10:17.84:0,18,223	0/0:3,0:3:8.94:0,9,113
chr10	99898966	.	A	ATCCCTCTCAC	13824.64	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=0.212;DP=361;FS=55.181;HRun=0;HaplotypeScore=124.2104;InbreedingCoeff=0.8378;MQ=76.33;MQ0=0;MQRankSum=-11.029;QD=79.00;ReadPosRankSum=2.974;VQSLOD=2.8267;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,6:16:1.66:610,2,0	0/0:6,0:6:9.03:0,9,300	0/0:21,0:17:2.19:0,2,659	0/0:21,0:18:35.90:0,36,976	0/0:12,0:12:27.07:0,27,717	1/1:5,9:17:33.03:1454,33,0	0/0:16,0:16:36.59:0,37,1130	1/1:16,6:22:57.19:2334,57,0	1/1:9,0:12:36.11:1004,36,0	0/0:11,0:11:18.05:0,18,383	0/0:9,0:9:21.07:0,21,639	0/0:14,0:14:33.11:0,33,1042	0/0:6,0:6:9.07:0,9,243	0/0:7,0:7:21.04:0,21,527	0/0:14,0:14:39.12:0,39,1218	0/1:13,0:13:66.42:66,0,914	0/0:8,0:8:21.07:0,21,646	1/1:8,0:9:12.04:380,12,0	1/1:13,2:16:45.06:1544,45,0	1/1:10,2:11:15.52:507,16,0	1/1:6,7:14:18.02:764,18,0	0/0:6,0:6:15.05:0,15,422	0/0:9,0:9:18.06:0,18,530	0/0:15,0:15:32.69:0,33,981	0/0:11,0:11:21.07:0,21,638	1/1:12,5:17:48.15:1934,48,0	1/1:6,9:17:48.10:2281,48,0	1/1:6,3:9:27.06:947,27,0
chr10	99898967	.	T	TCC	4310.07	PASS	AB=0.944;AC=24;AF=0.429;AN=56;BaseQRankSum=10.151;DP=354;FS=45.450;HRun=1;HaplotypeScore=107.5996;InbreedingCoeff=0.8662;MQ=75.40;MQ0=0;MQRankSum=-9.669;QD=22.57;ReadPosRankSum=5.495;VQSLOD=0.6941;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,1:15:20.98:239,21,0	0/0:6,0:6:9.03:0,9,134	0/1:20,1:17:0.60:1,0,336	0/0:20,0:17:33.94:0,34,500	0/0:13,0:13:27.06:0,27,362	1/1:14,0:14:33.02:383,33,0	0/0:16,0:16:36.10:0,36,518	1/1:16,2:21:33.33:665,33,0	1/1:9,1:13:36.10:491,36,0	0/0:10,0:10:18.05:0,18,235	0/0:9,0:9:21.07:0,21,297	0/0:13,0:13:32.56:0,33,407	0/0:6,0:6:8.75:0,9,123	0/0:7,0:7:20.91:0,21,240	0/0:14,0:14:39.12:0,39,550	0/1:13,0:14:7.85:8,0,416	0/0:8,0:8:21.07:0,21,300	1/1:5,0:9:12.04:184,12,0	1/1:13,2:15:38.15:521,38,0	1/1:10,2:10:17.89:232,18,0	1/1:13,0:13:18.01:186,18,0	0/0:6,0:6:15.52:0,16,224	0/0:9,0:9:18.06:0,18,248	0/0:15,0:15:33.09:0,33,470	0/0:11,0:11:18.03:0,18,226	1/1:16,2:18:42.20:555,42,0	1/1:15,1:17:48.07:563,48,0	1/1:7,2:9:23.25:282,23,0
chr10	99898974	.	C	CCT	588.91	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=7.027;DP=333;FS=29.155;HRun=0;HaplotypeScore=99.3220;InbreedingCoeff=0.4495;MQ=76.71;MQ0=0;MQRankSum=-5.470;QD=5.26;ReadPosRankSum=1.042;VQSLOD=1.2740;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:2.65:35,3,0	0/0:7,0:7:9:0,9,77	0/0:23,0:19:17.54:0,18,315	0/0:23,0:20:11.12:0,11,295	0/0:12,0:12:17.46:0,17,140	1/1:6,7:13:32.82:362,33,0	0/0:17,0:17:35.98:0,36,311	1/1:15,0:15:20.17:137,20,0	0/1:14,0:14:6.38:6,0,50	0/0:7,0:7:5.98:0,6,49	0/0:7,0:7:14.91:0,15,114	0/0:17,0:17:31.24:0,31,239	0/0:7,0:7:10.54:0,11,79	0/0:10,0:10:12.47:0,12,106	0/0:16,0:16:41.94:0,42,357	0/0:14,0:14:26.11:0,26,241	0/0:10,0:10:20.95:0,21,173	0/1:5,0:5:2.52:16,0,3	0/1:11,0:11:13.67:39,0,14	1/1:9,0:7:0.75:9,1,0	0/0:14,0:14:4.41:0,4,12	0/0:5,0:5:12.48:0,12,107	0/0:6,0:6:12:0,12,104	0/0:14,0:14:26.97:0,27,231	0/0:10,0:10:15.74:0,16,106	0/1:12,0:12:12.54:14,0,13	0/1:15,0:15:15.40:73,0,15	1/1:7,0:7:11.75:64,12,0
chr10	99899026	.	GC	G	5024.64	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=8.935;DP=447;FS=1.703;HRun=2;HaplotypeScore=56.9044;InbreedingCoeff=0.9739;MQ=70.08;MQ0=0;MQRankSum=-3.063;QD=31.21;ReadPosRankSum=-3.613;VQSLOD=3.4929;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,15:21:56.94:620,57,0	0/0:3,0:3:9.03:0,9,124	0/0:27,1:25:61.87:0,62,905	0/0:25,0:21:27.75:0,28,537	0/0:11,0:10:30.09:0,30,429	0/0:18,0:18:54.15:0,54,759	0/0:21,0:21:63.20:0,63,924	1/1:0,23:23:66.09:722,66,0	1/1:0,17:17:48.16:623,48,0	0/0:14,0:14:36.12:0,36,538	0/0:15,0:15:45.15:0,45,672	0/0:21,0:21:63.18:0,63,900	0/0:14,0:14:42.11:0,42,584	0/0:10,0:10:30.10:0,30,446	0/0:20,0:20:60.20:0,60,898	0/0:16,0:16:45.14:0,45,655	0/0:18,0:18:54.17:0,54,788	1/1:1,17:18:6.44:578,6,0	1/1:2,12:14:36.04:420,36,0	1/1:2,9:11:30.09:375,30,0	1/1:0,22:22:48.14:608,48,0	0/0:6,0:6:18.06:0,18,269	0/0:10,0:10:30.10:0,30,449	0/0:19,0:19:57.16:0,57,829	0/0:17,0:17:48.16:0,48,718	1/1:0,16:16:41.71:504,42,0	1/1:1,12:13:27.09:342,27,0	1/1:0,6:6:18.06:234,18,0
chr10	99899216	.	TA	T	2118.42	PASS	AB=0.903;AC=20;AF=0.357;AN=56;BaseQRankSum=3.546;DP=452;FS=1.362;HRun=11;HaplotypeScore=58.2940;InbreedingCoeff=0.7377;MQ=65.06;MQ0=0;MQRankSum=-1.146;QD=12.17;ReadPosRankSum=-1.318;VQSLOD=2.9862;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:0,0:11:25.57:0,26,128	0/0:11,0:11:27.07:0,27,288	0/1:11,1:10:12.64:13,0,73	0/1:9,1:10:0.79:1,0,168	0/0:23,2:26:13.70:0,14,540	0/0:19,0:19:51.13:0,51,260	0/0:13,1:14:8.43:0,8,290	1/1:4,26:30:71.88:587,72,0	0/0:16,0:16:36.93:0,37,181	0/0:16,0:16:39.10:0,39,414	0/0:15,1:16:17.46:0,17,391	0/0:21,0:22:53.95:0,54,547	0/0:15,0:15:10.88:0,11,298	0/1:12,2:14:7.14:7,0,341	0/0:18,0:18:42.10:0,42,442	0/0:13,0:13:36.09:0,36,384	0/0:33,1:34:57.81:0,58,810	0/0:20,0:21:39.90:0,40,201	1/1:3,8:11:11.48:182,11,0	1/1:2,17:20:52.97:425,53,0	1/1:0,3:5:13.06:86,13,0	0/0:9,0:9:21.05:0,21,224	0/0:15,1:17:20.39:0,20,397	1/1:1,11:12:29.97:246,30,0	0/1:17,2:18:1.19:1,0,390	1/1:4,13:16:32.92:268,33,0	1/1:0,14:14:35.96:295,36,0	1/1:0,8:10:28.05:209,28,0
chr10	99899224	.	A	AAAAC	1227.53	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=-1.412;DP=473;FS=4.408;HRun=0;HaplotypeScore=96.0140;InbreedingCoeff=0.5601;MQ=66.65;MQ0=0;MQRankSum=0.253;QD=25.57;ReadPosRankSum=3.492;VQSLOD=3.4800;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:8.24:10,0,8	0/0:11,0:11:33.07:0,33,477	0/1:11,0:9:3.95:4,0,169	0/0:12,0:12:26.98:0,27,358	0/0:25,0:25:72.05:0,72,1010	1/1:0,22:24:54.19:1319,54,0	0/0:13,0:13:39.10:0,39,564	0/0:33,0:33:96.17:0,96,971	0/0:15,0:15:27.70:0,28,117	0/0:20,0:20:54.12:0,54,765	0/0:16,0:16:45.13:0,45,688	0/0:21,0:21:63.01:0,63,905	0/0:15,0:15:45.10:0,45,631	0/0:14,0:14:42.14:0,42,660	0/0:20,0:20:51.14:0,51,761	0/0:13,0:13:39.11:0,39,597	0/0:33,0:34:76.63:0,77,1322	0/0:22,0:22:23.38:0,23,111	0/0:11,0:11:30.89:0,31,297	0/0:20,0:20:57.10:0,57,597	0/0:6,0:6:15.04:0,15,160	0/0:10,0:10:30.07:0,30,432	0/0:18,0:18:53.97:0,54,747	0/0:12,0:12:30.02:0,30,299	0/0:21,0:20:60.12:0,60,845	0/0:17,0:16:48.09:0,48,485	0/0:16,0:15:42.08:0,42,431	0/0:10,0:10:30.08:0,30,320
chr10	99899227	.	A	AAC	1409.29	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-1.841;DP=481;FS=25.383;HRun=0;HaplotypeScore=76.1406;InbreedingCoeff=0.7083;MQ=67.74;MQ0=0;MQRankSum=-2.842;QD=26.10;ReadPosRankSum=3.548;VQSLOD=1.9295;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:32.66:146,0,33	0/0:11,0:11:33.09:0,33,418	0/0:11,0:9:19.85:0,20,188	0/0:13,0:13:18.18:0,18,317	0/0:26,0:26:74.48:0,74,866	0/0:24,0:24:1.84:0,2,14	0/0:13,0:13:39.08:0,39,467	0/0:34,0:34:95.74:0,96,772	1/1:4,12:16:45.05:728,45,0	0/0:20,0:20:60.12:0,60,720	0/0:18,0:18:51.11:0,51,626	0/0:21,0:21:62.48:0,62,755	0/0:14,0:15:44.09:0,44,509	0/0:14,0:14:42.10:0,42,528	0/0:18,0:18:51.11:0,51,637	0/0:13,0:13:39.12:0,39,512	0/0:33,0:33:95.17:0,95,1184	1/1:2,19:23:39.13:664,39,0	0/0:11,0:11:31.31:0,31,232	0/0:20,0:20:59.73:0,60,452	0/0:6,0:6:14.94:0,15,115	0/0:11,0:11:33.06:0,33,384	0/0:18,0:18:53.42:0,53,613	0/0:14,0:14:32.81:0,33,247	0/0:20,0:19:60.05:0,60,697	0/0:17,0:16:47.88:0,48,386	0/0:16,0:15:41.66:0,42,314	0/0:10,0:10:29.87:0,30,228
chr10	99899327	.	TAC	T	485.11	PASS	AB=0.952;AC=27;AF=0.587;AN=46;BaseQRankSum=5.114;DP=426;FS=3.524;HRun=0;HaplotypeScore=73.2033;InbreedingCoeff=0.4871;MQ=49.60;MQ0=8;MQRankSum=-3.585;QD=2.31;ReadPosRankSum=-0.440;VQSLOD=1.5599;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:21:6.15:28,6,0	0/0:8,0:8:3.01:0,3,44	./.	./.	0/0:13,0:13:5.57:0,6,87	1/1:20,0:19:2.84:14,3,0	1/1:7,2:9:6.01:64,6,0	./.	1/1:18,0:18:25.31:125,25,0	1/1:12,1:12:4.82:37,5,0	1/1:8,3:10:6.02:64,6,0	0/0:17,0:17:16.30:0,16,220	0/0:7,0:7:9.03:0,9,125	0/0:7,0:7:6.02:0,6,84	1/1:8,1:9:3:32,3,0	0/0:14,0:13:0.89:0,1,136	0/0:20,0:20:18.04:0,18,244	1/1:22,0:20:8.52:42,9,0	./.	1/1:11,3:12:3.95:33,4,0	1/1:17,4:21:2.84:32,3,0	./.	0/0:17,0:17:11.98:0,12,137	0/1:19,1:20:22.94:23,0,79	1/1:8,0:9:2.84:14,3,0	0/0:11,0:11:0:0,0,0	1/1:11,3:14:9.02:96,9,0	1/1:6,2:7:3.01:32,3,0
chr10	99899339	.	CACACACACACACACACACA	C	2690.26	PASS	AB=0.709;AC=6;AF=0.107;AN=56;BaseQRankSum=7.283;DP=470;FS=14.324;HRun=0;HaplotypeScore=180.7243;InbreedingCoeff=0.5512;MQ=48.38;MQ0=15;MQRankSum=-6.627;QD=35.40;ReadPosRankSum=3.529;VQSLOD=1.6468;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:50.91:0,51,2641	0/0:7,0:7:13.40:0,13,696	0/0:21,0:6:18.06:0,18,342	0/0:25,0:13:39.12:0,39,600	0/0:15,0:14:31.48:0,31,1999	1/1:17,0:17:12.04:384,12,0	0/0:11,0:11:24.06:0,24,1364	0/0:28,0:26:69.23:0,69,2393	1/1:2,15:18:8.85:1704,9,0	0/0:12,0:11:33.11:0,33,1940	0/0:16,0:15:26.97:0,27,1190	0/0:20,0:20:57.19:0,57,4165	0/0:13,0:13:39.13:0,39,2734	0/0:9,0:9:24.08:0,24,1727	0/0:14,0:14:33.11:0,33,2021	0/1:15,2:16:99:128,0,2528	0/0:25,0:24:63.21:0,63,3834	0/1:2,20:21:23.34:602,0,23	0/0:16,0:16:45.15:0,45,1838	0/0:13,0:11:8.71:0,9,597	0/0:28,0:27:57.66:0,58,2931	0/0:6,0:6:15.05:0,15,812	0/0:12,0:12:24.08:0,24,1436	0/0:21,0:20:33.07:0,33,2001	0/0:12,0:11:18.06:0,18,1076	0/0:14,0:13:37.37:0,37,1615	0/0:19,0:18:54.18:0,54,3139	0/0:9,0:8:15.05:0,15,563
chr10	99899341	.	CACACACACACACACACACA	C	2194.47	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=7.525;DP=478;FS=12.221;HRun=0;HaplotypeScore=184.6402;InbreedingCoeff=0.2964;MQ=48.63;MQ0=15;MQRankSum=-6.830;QD=27.78;ReadPosRankSum=3.789;VQSLOD=1.9257;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:50.91:0,51,2641	0/0:7,0:7:13.40:0,13,696	0/0:19,0:6:18.06:0,18,342	0/0:23,0:10:30.10:0,30,496	0/0:14,0:13:28.48:0,28,1961	1/1:2,17:18:12.04:491,12,0	0/0:12,0:12:27.06:0,27,1451	0/0:31,0:29:78.26:0,78,2717	0/1:18,0:18:28:1303,0,28	0/0:14,0:13:39.13:0,39,2136	0/0:14,0:13:23.97:0,24,1153	0/0:19,0:19:54.19:0,54,4128	0/0:13,0:13:39.13:0,39,2734	0/0:10,0:10:27.09:0,27,1827	0/0:14,0:14:33.11:0,33,2021	0/1:19,0:18:84.28:84,0,2765	0/0:26,0:25:66.22:0,66,3956	0/1:23,0:21:23.34:436,0,23	0/0:17,0:17:48.16:0,48,1935	0/0:13,0:11:8.71:0,9,597	0/0:30,0:29:63.68:0,64,3152	0/0:6,0:6:15.04:0,15,799	0/0:12,0:12:24.07:0,24,1423	0/0:20,0:19:30.10:0,30,1981	0/0:11,0:10:15.05:0,15,1039	0/0:16,0:15:43.39:0,43,1842	0/0:19,0:18:54.18:0,54,3140	0/0:9,0:8:15.05:0,15,563
chr10	99899763	.	GC	G	4085.36	PASS	AB=0.944;AC=23;AF=0.411;AN=56;BaseQRankSum=10.474;DP=443;FS=6.173;HRun=9;HaplotypeScore=46.7032;InbreedingCoeff=0.9300;MQ=67.57;MQ0=9;MQRankSum=-0.547;QD=19.64;ReadPosRankSum=1.924;VQSLOD=4.0891;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:51.03:467,51,0	0/0:8,0:8:21.05:0,21,232	0/1:16,1:10:3.46:3,0,181	0/0:15,0:8:5.97:0,6,154	0/0:18,0:18:48.13:0,48,545	1/1:1,23:24:63.03:577,63,0	0/0:11,0:11:33.06:0,33,366	1/1:5,12:17:35.96:321,36,0	1/1:1,12:13:36.02:329,36,0	0/0:11,0:11:27.08:0,27,312	0/0:9,0:9:27.08:0,27,307	0/0:18,0:18:42.12:0,42,485	0/0:14,0:14:39.10:0,39,441	0/0:13,0:13:36.11:0,36,415	0/0:16,0:16:48.09:0,48,531	0/0:10,0:10:24.04:0,24,263	0/0:35,0:35:99:0,99,1133	1/1:2,29:30:72.03:659,72,0	1/1:4,9:11:27.01:247,27,0	1/1:1,13:14:30.01:274,30,0	1/1:0,15:14:36.02:329,36,0	0/0:14,0:14:33.10:0,33,378	0/0:8,0:7:15.04:0,15,173	0/0:20,1:20:29.69:0,30,587	0/0:13,0:13:36.06:0,36,399	1/1:2,13:15:39.02:357,39,0	1/1:0,12:12:33.02:302,33,0	1/1:4,9:12:24.01:220,24,0
chr10	99900031	.	GC	G	1498.01	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.583;DP=621;FS=2.659;HRun=4;HaplotypeScore=60.5802;InbreedingCoeff=0.9843;MQ=74.22;MQ0=0;MQRankSum=0.190;QD=32.57;ReadPosRankSum=1.032;VQSLOD=4.2509;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1680	0/0:7,0:7:21.04:0,21,274	0/0:19,0:19:38.91:0,39,524	0/0:25,0:25:46.41:0,46,866	0/0:16,0:16:45.14:0,45,611	0/0:29,0:29:87.29:0,87,1208	0/0:28,0:28:81.26:0,81,1117	0/0:29,0:29:72.20:0,72,931	1/1:1,23:24:69.21:828,69,0	0/0:28,0:28:78.20:0,78,1039	0/0:11,0:11:30.10:0,30,418	0/0:36,0:36:93.31:0,93,1301	0/0:18,0:18:54.17:0,54,735	0/0:20,0:20:57.19:0,57,795	0/0:25,0:25:66.22:0,66,923	0/0:26,0:26:75.24:0,75,1033	0/0:28,0:28:78.26:0,78,1092	1/1:0,22:22:66.20:792,66,0	0/0:34,0:34:96.32:0,96,1342	0/0:10,0:10:23.99:0,24,292	0/0:37,0:37:99:0,108,1478	0/0:8,0:8:21.07:0,21,293	0/0:12,0:12:33.10:0,33,444	0/0:36,0:35:99:0,105,1432	0/0:7,0:7:21.07:0,21,294	0/0:17,0:17:51.14:0,51,693	0/0:20,0:20:57.18:0,57,782	0/0:7,0:7:15.05:0,15,210
chr10	99900199	.	AATGCACGCAGC	A	3022.49	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=7.267;DP=613;FS=15.280;HRun=0;HaplotypeScore=200.5000;InbreedingCoeff=0.9767;MQ=76.33;MQ0=0;MQRankSum=-4.798;QD=15.91;ReadPosRankSum=0.299;VQSLOD=1.7312;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:95.38:0,95,749	0/0:9,0:9:25.71:0,26,195	0/0:21,0:21:63.05:0,63,677	0/0:28,0:27:75.02:0,75,768	0/0:12,0:12:26.13:0,26,221	0/0:14,0:14:41.95:0,42,348	0/0:51,0:51:99:0,152,1164	1/1:9,0:9:24.67:169,25,0	1/1:18,0:18:38.39:254,38,0	0/0:23,0:23:50.55:0,51,484	0/0:10,0:10:29.78:0,30,234	0/0:26,0:26:68.77:0,69,553	0/0:8,0:8:23.88:0,24,187	0/0:13,0:13:32:0,32,227	0/0:6,0:6:14.98:0,15,125	0/0:12,0:12:18.97:0,19,258	0/0:40,0:40:99:0,113,868	1/1:41,0:41:99:818,100,0	1/1:21,0:21:51.78:372,52,0	1/1:12,0:12:32.60:222,33,0	1/1:59,0:57:99:928,135,0	0/0:20,0:20:45.84:0,46,341	0/0:13,0:13:34.17:0,34,285	0/0:70,0:69:99:0,196,1487	0/0:9,0:10:5.95:0,6,173	1/1:2,14:16:37.87:224,38,0	1/1:7,0:7:20.66:132,21,0	1/1:7,0:7:17.75:118,18,0
chr10	99900560	.	AGCAC	A	624.51	PASS	AB=0.636;AC=9;AF=0.180;AN=50;BaseQRankSum=6.292;DP=428;FS=7.018;HRun=0;HaplotypeScore=54.9916;InbreedingCoeff=0.6535;MQ=40.21;MQ0=76;MQRankSum=-5.717;QD=17.84;ReadPosRankSum=-0.434;VQSLOD=1.9640;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:8:21.07:0,21,484	0/0:6,0:2:6.02:0,6,147	0/0:8,0:7:21.07:0,21,469	0/0:7,0:5:15.03:0,15,317	0/0:4,0:2:6:0,6,101	./.	0/0:69,0:25:70.12:0,70,1724	0/1:3,4:6:75.97:198,0,76	0/0:9,0:6:18.06:0,18,466	0/0:19,0:14:42.14:0,42,999	0/0:7,0:5:15.05:0,15,377	0/0:17,0:13:33.11:0,33,836	0/0:13,0:11:33.11:0,33,849	0/0:15,0:12:33.09:0,33,846	0/0:11,0:6:18.06:0,18,466	0/0:4,0:3:9.03:0,9,218	0/0:32,0:21:57.20:0,57,1435	0/0:34,0:20:54.19:0,54,1386	1/1:10,2:3:6.49:109,6,0	./.	./.	0/0:19,0:16:30.10:0,30,717	0/0:5,0:3:6.02:0,6,155	0/0:60,0:30:64.45:0,64,1565	0/0:10,0:7:15.05:0,15,370	1/1:3,6:6:18.06:323,18,0	1/1:3,3:4:6.02:94,6,0	1/1:1,0:1:3.01:40,3,0
chr10	99900600	.	CCTT	C	3087.87	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.395;DP=455;FS=4.678;HRun=0;HaplotypeScore=87.8733;InbreedingCoeff=0.9729;MQ=86.54;MQ0=0;MQRankSum=-10.211;QD=28.86;ReadPosRankSum=-2.442;VQSLOD=2.7132;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:55.43:0,55,1116	0/0:3,0:3:9.03:0,9,183	0/0:19,0:19:51.17:0,51,1021	0/0:23,0:23:47.74:0,48,912	0/0:5,0:5:15.05:0,15,328	1/1:1,10:11:18.06:285,18,0	0/0:29,0:29:78.25:0,78,1664	1/1:5,18:23:54.18:854,54,0	0/0:16,0:16:45.15:0,45,984	0/0:17,0:17:45.15:0,45,984	0/0:13,0:13:39.13:0,39,853	0/0:18,0:18:48.16:0,48,1049	0/0:15,0:15:42.14:0,42,918	0/0:15,0:15:45.14:0,45,942	0/0:10,0:10:30.10:0,30,656	0/0:8,0:8:24.08:0,24,525	0/0:27,0:27:78.27:0,78,1705	0/0:29,0:29:87.28:0,87,1859	1/1:2,7:9:21.06:310,21,0	1/1:0,8:8:8.99:115,9,0	1/1:3,22:24:23.69:352,24,0	0/0:19,0:19:51.17:0,51,1058	0/0:8,0:8:24.08:0,24,503	0/0:39,0:39:99:0,102,2122	0/0:13,0:13:36.11:0,36,746	1/1:0,16:16:45.15:710,45,0	1/1:0,8:8:24.08:380,24,0	1/1:0,7:7:18.06:285,18,0
chr10	99901327	.	TCTC	T	40.13	PASS	AB=0.855;AC=3;AF=0.058;AN=52;BaseQRankSum=7.827;DP=516;FS=16.503;HRun=0;HaplotypeScore=181.6638;InbreedingCoeff=-0.0870;MQ=37.57;MQ0=87;MQRankSum=-6.925;QD=1.15;ReadPosRankSum=-3.210;VQSLOD=1.2144;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:26:44.61:0,45,1161	0/0:4,0:3:5.28:0,5,83	./.	./.	0/0:19,0:19:25.18:0,25,879	0/0:19,0:12:33.08:0,33,751	0/0:39,0:26:28.13:0,28,698	0/1:11,1:5:31.36:31,0,268	0/0:19,0:19:18.88:0,19,445	0/0:23,0:13:38.09:0,38,827	0/0:12,0:10:17.02:0,17,319	0/0:19,0:12:12.66:0,13,416	0/0:16,0:12:26.65:0,27,601	0/0:15,0:9:20.59:0,21,510	0/0:23,0:13:27.76:0,28,613	0/0:19,0:12:24.83:0,25,550	0/0:16,0:10:4.07:0,4,495	0/0:8,0:8:18.32:0,18,208	0/0:4,0:1:3.01:0,3,56	0/1:6,4:10:71.56:95,0,72	0/0:17,0:11:8.38:0,8,334	0/0:27,0:20:22.55:0,23,647	0/0:16,0:12:20.65:0,21,408	0/0:41,0:31:70.05:0,70,1847	0/0:18,0:16:39.06:0,39,765	0/0:13,2:13:2.59:0,3,355	0/0:10,0:10:16.10:0,16,439	0/1:12,1:12:3.25:3,0,523
chr10	99901341	.	C	CTCT	663.41	PASS	AB=0.953;AC=17;AF=0.315;AN=54;BaseQRankSum=8.523;DP=528;FS=22.155;HRun=0;HaplotypeScore=194.2520;InbreedingCoeff=-0.2666;MQ=38.08;MQ0=77;MQRankSum=-8.693;QD=2.45;ReadPosRankSum=0.242;VQSLOD=1.2750;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:24:34.19:0,34,718	0/0:4,0:3:5.39:0,5,65	0/1:31,0:1:0:0,0,0	./.	0/1:20,0:20:21.03:21,0,671	0/0:21,0:12:33.07:0,33,579	0/0:27,0:18:21.07:0,21,391	0/1:10,0:6:29.21:29,0,115	0/1:15,2:23:99:168,0,273	0/0:26,0:15:9.73:0,10,583	0/1:13,0:13:30.50:30,0,295	0/1:19,1:14:60:60,0,379	0/0:17,0:14:35.97:0,36,603	0/0:13,0:10:21.89:0,22,375	0/0:24,0:9:24.08:0,24,432	0/1:20,0:11:49.06:49,0,320	0/1:15,0:9:60.97:61,0,312	0/0:7,0:7:13.47:0,13,207	1/1:5,0:1:2.80:13,3,0	0/1:10,0:13:2.12:2,0,124	0/1:9,2:9:10.95:11,0,101	0/1:22,1:17:18.76:19,0,453	0/1:19,0:15:9.23:9,0,361	0/0:38,0:31:46.37:0,46,1287	0/0:16,0:16:35.85:0,36,580	0/1:11,1:13:84.35:84,0,238	0/1:9,2:12:45.97:46,0,263	0/1:9,3:11:99:209,0,199
chr10	99901359	.	C	CTCTT	247.15	PASS	AB=0.929;AC=10;AF=0.179;AN=56;BaseQRankSum=6.902;DP=511;FS=66.756;HRun=0;HaplotypeScore=195.3725;InbreedingCoeff=-0.0904;MQ=37.81;MQ0=70;MQRankSum=-6.654;QD=1.66;ReadPosRankSum=0.800;VQSLOD=0.5145;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:23:39.29:39,0,681	0/0:5,0:3:3.86:0,4,65	0/0:31,0:2:4.26:0,4,42	0/0:28,0:1:3.01:0,3,54	0/0:18,0:18:8.79:0,9,634	0/0:21,0:10:30.09:0,30,592	0/0:30,0:17:23.96:0,24,459	0/0:13,0:7:11.26:0,11,223	0/1:20,2:22:99:125,0,252	0/0:26,0:13:35.62:0,36,562	0/1:19,2:18:26.96:27,0,353	0/0:25,0:16:21.43:0,21,454	0/0:15,0:11:27.08:0,27,527	0/1:12,2:9:40.72:41,0,353	0/0:23,0:8:18.03:0,18,322	0/0:18,0:8:9.23:0,9,223	0/1:15,1:9:5.42:5,0,344	0/0:5,0:5:13.26:0,13,158	1/1:6,0:1:2.84:14,3,0	0/1:9,2:11:85.51:87,0,86	0/0:11,0:8:5.53:0,6,92	0/0:20,1:15:22.09:0,22,536	0/0:13,0:10:20.93:0,21,309	0/0:34,1:24:20.50:0,20,961	0/1:14,1:14:36.01:36,0,379	0/1:14,0:13:6.49:6,0,256	0/0:12,0:12:31.33:0,31,293	0/0:12,0:11:12.45:0,12,283
chr10	99901360	.	C	CCCT	66.46	PASS	AB=0.971;AC=11;AF=0.196;AN=56;BaseQRankSum=9.565;DP=504;FS=64.646;HRun=0;HaplotypeScore=189.2041;InbreedingCoeff=-0.1403;MQ=37.41;MQ0=70;MQRankSum=-8.471;QD=0.50;ReadPosRankSum=2.700;VQSLOD=0.6051;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,2:22:6.50:0,7,519	0/0:5,0:3:5.92:0,6,70	0/0:31,0:2:2.91:0,3,39	0/0:29,0:1:3.01:0,3,43	0/0:18,0:18:9.11:0,9,488	0/0:21,0:10:30.09:0,30,490	0/0:30,0:17:14.47:0,14,354	0/0:13,0:7:13.82:0,14,181	0/1:21,1:22:32.09:32,0,196	0/0:25,0:13:20.43:0,20,401	0/1:21,0:18:16.58:17,0,262	0/0:24,0:15:6.12:0,6,342	0/0:14,0:10:24:0,24,414	0/0:14,0:9:17.96:0,18,311	0/0:22,0:8:9.45:0,9,233	0/0:18,0:8:6.27:0,6,160	0/0:16,0:9:23.88:0,24,316	0/1:5,0:5:6.24:6,0,49	1/1:6,0:1:2.84:14,3,0	0/1:11,0:11:28.96:29,0,44	0/1:9,2:8:65.49:66,0,65	0/1:21,0:15:2.60:3,0,412	0/0:14,0:10:1.55:0,2,201	0/0:31,1:22:17.70:0,18,716	0/0:15,0:14:9.18:0,9,278	0/1:13,1:13:8.89:9,0,158	0/1:11,0:11:10.71:11,0,131	0/1:11,0:10:12.38:12,0,143
chr10	99901363	.	C	CTCT	2784.42	PASS	AB=0.859;AC=22;AF=0.393;AN=56;BaseQRankSum=10.301;DP=481;FS=44.334;HRun=0;HaplotypeScore=173.0238;InbreedingCoeff=-0.5728;MQ=37.41;MQ0=61;MQRankSum=-8.759;QD=8.17;ReadPosRankSum=2.619;VQSLOD=1.4483;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,1:21:40.52:41,0,539	0/0:5,0:3:8.55:0,9,83	0/0:25,1:2:2.91:0,3,39	0/0:25,2:1:3.01:0,3,42	0/1:12,3:18:99:118,0,484	0/0:19,0:9:27.09:0,27,480	0/1:29,1:17:47.89:48,0,350	0/1:7,2:6:39.78:40,0,156	0/1:8,2:22:99:232,0,151	0/1:21,3:13:99:217,0,378	0/1:13,3:18:99:172,0,244	0/1:17,1:15:73.26:73,0,339	0/0:14,0:10:24:0,24,443	0/0:12,0:9:18.86:0,19,317	0/1:17,1:7:57.74:58,0,209	0/1:15,2:8:99:155,0,150	0/1:15,0:9:16.45:16,0,283	0/1:2,2:5:48.68:135,0,49	1/1:6,0:1:2.84:14,3,0	0/1:1,4:11:26.32:262,0,26	0/1:8,0:7:27.28:27,0,46	0/1:18,4:16:99:112,0,398	0/1:12,2:10:99:124,0,181	0/0:27,0:19:14.86:0,15,734	0/1:9,3:13:99:186,0,288	0/1:7,2:11:99:134,0,153	0/1:3,6:10:84.71:448,0,85	0/1:4,4:8:87.07:328,0,87
chr10	99901391	.	CT	C	236.99	PASS	AB=0.892;AC=16;AF=0.296;AN=54;BaseQRankSum=5.183;DP=298;FS=4.725;HRun=2;HaplotypeScore=99.5827;InbreedingCoeff=0.2080;MQ=28.77;MQ0=79;MQRankSum=-4.424;QD=2.96;ReadPosRankSum=-0.042;VQSLOD=-0.0771;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:10:17.74:0,18,165	1/1:3,0:1:2.50:9,2,0	0/0:23,0:1:2.97:0,3,20	./.	0/0:13,1:13:12.96:0,13,157	0/0:14,0:6:18.06:0,18,269	0/0:15,1:5:9.03:0,9,121	0/0:5,0:2:1.36:0,1,4	0/1:7,3:10:12.50:12,0,34	0/1:9,1:5:26.35:26,0,50	0/0:13,0:10:20.66:0,21,199	0/0:12,0:5:13.29:0,13,183	0/0:10,0:7:18.06:0,18,263	0/0:6,0:3:9.03:0,9,134	0/0:12,0:2:2.99:0,3,24	0/0:8,0:2:5.61:0,6,55	0/0:10,0:4:6.02:0,6,90	0/1:5,1:5:23.02:23,0,28	1/1:3,1:1:3:27,3,0	1/1:4,0:4:8.20:32,8,0	0/0:7,0:4:0.23:0,0,40	0/1:12,1:9:32.01:32,0,53	0/1:10,0:7:12.23:12,0,61	0/0:12,1:7:17.27:0,17,231	0/0:9,0:8:20.12:0,20,197	0/1:7,1:7:31.37:40,0,31	1/1:7,0:6:17.34:111,17,0	1/1:5,0:4:3.29:66,3,0
chr10	99901393	.	TCTC	T	612.51	PASS	AB=0.926;AC=11;AF=0.204;AN=54;BaseQRankSum=4.375;DP=296;FS=10.464;HRun=0;HaplotypeScore=96.9483;InbreedingCoeff=0.5254;MQ=28.21;MQ0=78;MQRankSum=-3.628;QD=10.94;ReadPosRankSum=-1.182;VQSLOD=2.2911;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:9:12.51:0,13,278	0/0:3,0:1:3.01:0,3,30	0/1:23,0:1:0:0,0,0	./.	0/0:13,0:12:10.87:0,11,314	0/0:15,0:6:18.06:0,18,423	0/0:16,0:5:9.03:0,9,194	1/1:5,0:2:3.47:27,3,0	0/0:9,0:9:6.70:0,7,106	0/0:10,0:5:14.96:0,15,203	0/0:14,0:11:20.97:0,21,341	0/0:12,0:5:15.05:0,15,339	0/0:11,0:7:18.04:0,18,377	0/0:6,0:3:9.03:0,9,220	0/0:12,0:2:3.01:0,3,47	0/0:8,0:2:6.02:0,6,119	0/0:10,0:4:6.02:0,6,147	0/0:6,0:5:12.73:0,13,106	0/0:2,1:1:2.80:0,3,13	1/1:0,3:4:12.04:196,12,0	0/1:6,0:3:0.19:0,0,69	0/0:13,0:9:17.79:0,18,219	0/0:11,0:8:12.03:0,12,198	0/0:15,0:8:14.37:0,14,353	0/0:8,0:7:21.07:0,21,432	0/1:5,2:6:15.45:51,0,15	1/1:2,5:6:18.06:324,18,0	1/1:1,3:3:9.03:157,9,0
chr10	99901527	.	T	TCCTC	568.87	PASS	AB=0.837;AC=9;AF=0.161;AN=56;BaseQRankSum=7.157;DP=392;FS=3.057;HRun=0;HaplotypeScore=104.4342;InbreedingCoeff=-0.2104;MQ=88.42;MQ0=0;MQRankSum=-2.600;QD=5.17;ReadPosRankSum=-3.245;VQSLOD=1.5938;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:83.87:0,84,1659	0/1:1,3:3:53.90:151,0,54	0/0:41,0:36:59.06:0,59,1141	0/0:43,0:37:38.78:0,39,1066	0/1:13,1:14:83.29:83,0,572	0/0:14,0:10:30.10:0,30,603	0/1:13,2:15:99:107,0,713	0/0:19,0:19:51.25:0,51,1067	0/0:10,0:10:27.98:0,28,513	0/1:18,1:18:38.04:38,0,858	0/0:5,0:5:5.47:0,5,219	0/0:14,0:14:36.12:0,36,727	0/1:13,2:14:47.16:47,0,629	0/0:8,0:8:22.87:0,23,407	0/1:8,1:9:48.93:49,0,438	0/1:7,2:8:99:149,0,353	0/0:10,0:10:30.10:0,30,605	0/0:4,0:4:12.04:0,12,252	0/0:10,0:10:30.10:0,30,629	0/0:11,1:12:11.21:0,11,545	0/0:16,0:15:45.15:0,45,910	0/1:13,3:11:42.40:42,0,393	0/1:6,3:6:42.10:42,0,222	0/0:12,0:12:36.12:0,36,755	0/0:5,0:5:13.86:0,14,256	0/0:16,0:16:48.16:0,48,985	0/0:14,0:14:41.22:0,41,752	0/0:1,0:1:3.01:0,3,63
chr10	99902201	.	CTCGAAGATTGCCAAGCCA	C	6002.47	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.468;DP=580;FS=19.730;HRun=0;HaplotypeScore=271.4245;InbreedingCoeff=0.9695;MQ=102.29;MQ0=0;MQRankSum=-8.010;QD=73.20;ReadPosRankSum=1.666;VQSLOD=3.2278;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,7938	0/0:11,0:11:33.11:0,33,2574	0/0:39,0:39:99:0,105,5837	0/0:35,0:35:81.24:0,81,4484	0/0:18,0:18:45.15:0,45,3585	0/0:14,0:14:33.11:0,33,2827	0/0:35,0:35:99:0,105,7873	1/1:7,7:13:21.02:718,21,0	0/0:14,0:14:39.13:0,39,3104	0/0:26,0:26:72.25:0,72,5436	0/0:11,0:11:27.98:0,28,2203	0/0:26,0:26:78.25:0,78,6223	0/0:24,0:24:69.24:0,69,5707	0/0:19,0:19:54.19:0,54,4014	0/0:25,0:25:72.25:0,72,5566	0/0:25,0:25:75.26:0,75,6142	0/0:35,0:35:99:0,102,8369	0/0:20,0:20:60.16:0,60,4440	1/1:3,5:7:15.04:651,15,0	1/1:0,10:10:27.09:1395,27,0	1/1:6,7:13:6.49:312,6,0	0/0:18,0:18:39.13:0,39,3025	0/0:15,0:15:42.14:0,42,3496	0/0:34,0:34:90.31:0,90,6809	0/0:16,0:16:45.15:0,45,3910	1/1:4,12:16:36.12:1536,36,0	1/1:4,5:9:15.05:766,15,0	1/1:0,12:12:12.04:624,12,0
chr10	99902303	.	C	CTGTTCTCT	437.73	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.105;DP=520;FS=8.698;HRun=0;HaplotypeScore=135.3174;InbreedingCoeff=0.8705;MQ=75.78;MQ0=2;MQRankSum=-2.318;QD=27.36;ReadPosRankSum=-2.572;VQSLOD=2.3002;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:27.08:0,27,586	0/0:6,0:6:18.06:0,18,442	0/0:44,0:25:8.17:0,8,662	0/0:61,0:37:58.77:0,59,1115	0/0:20,0:20:42.14:0,42,1022	0/0:14,0:14:12.03:0,12,190	0/0:22,0:22:63.18:0,63,1428	0/0:22,0:21:32.85:0,33,928	0/0:11,0:11:27.09:0,27,721	0/0:17,0:16:36.12:0,36,870	1/1:5,11:15:21.07:530,21,0	0/0:14,0:14:42.14:0,42,1108	0/0:10,0:10:27.09:0,27,698	0/0:11,0:11:30.09:0,30,701	0/0:20,0:20:54.19:0,54,1384	0/0:7,0:7:21.07:0,21,547	0/0:24,0:24:57.20:0,57,1470	0/0:6,0:6:15.05:0,15,341	0/0:20,0:20:48.15:0,48,1071	0/0:23,0:23:45.15:0,45,1103	0/0:10,0:10:21.07:0,21,512	0/0:15,0:15:45.14:0,45,1050	0/0:13,0:13:39.13:0,39,985	0/0:17,0:17:45.13:0,45,1107	0/0:17,0:17:48.12:0,48,1110	0/0:26,0:26:72.25:0,72,1770	0/0:19,0:19:19.29:0,19,803	0/0:14,0:14:27.09:0,27,729
chr10	99902324	.	T	TTCTCTCTC	357.01	PASS	AB=1.000;AC=21;AF=0.389;AN=54;BaseQRankSum=4.416;DP=518;FS=1.705;HRun=0;HaplotypeScore=140.6469;InbreedingCoeff=0.4357;MQ=63.61;MQ0=10;MQRankSum=-2.919;QD=1.45;ReadPosRankSum=-4.791;VQSLOD=1.1251;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,15:26:6.02:95,6,0	0/1:6,0:5:12.97:13,0,42	1/1:26,0:12:2.84:9,3,0	0/0:38,0:20:1.45:0,1,28	0/0:18,0:18:17.86:0,18,376	1/1:19,0:19:10.41:83,10,0	0/0:25,0:24:9.99:0,10,636	1/1:22,0:17:1.95:16,2,0	0/0:12,0:12:14.83:0,15,298	0/0:20,0:19:40.95:0,41,782	0/0:15,0:14:5.84:0,6,74	0/0:21,0:21:51.20:0,51,1037	0/1:17,0:16:9.08:9,0,389	0/0:10,0:10:11.79:0,12,187	0/0:24,0:24:10.24:0,10,316	0/0:14,0:14:29.59:0,30,495	0/0:24,0:23:21.72:0,22,602	0/0:7,0:7:0.47:0,0,1	1/1:17,0:16:7.79:68,8,0	1/1:25,0:23:2.05:4,2,0	1/1:10,0:10:2.80:42,3,0	0/0:15,0:15:20.91:0,21,393	0/1:17,0:16:0.15:0,0,408	0/0:17,0:17:35.25:0,35,704	0/1:18,0:18:6.83:7,0,334	1/1:22,0:20:10.96:69,11,0	0/1:20,0:20:5.81:104,0,6	./.
chr10	99902343	.	TCACACACACA	T	362.74	PASS	AB=0.773;AC=7;AF=0.140;AN=50;BaseQRankSum=2.519;DP=428;FS=0.000;HRun=0;HaplotypeScore=130.7535;InbreedingCoeff=0.5345;MQ=47.14;MQ0=14;MQRankSum=-1.725;QD=6.98;ReadPosRankSum=-1.690;VQSLOD=2.2014;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:12.04:0,12,430	0/0:4,0:3:6.02:0,6,235	./.	./.	0/0:16,0:16:20.86:0,21,827	0/0:15,0:15:15.94:0,16,430	0/0:29,0:28:29.84:0,30,1029	0/0:17,0:12:5.69:0,6,43	0/0:10,0:17:1.71:0,2,5	0/0:22,0:22:33.10:0,33,1196	0/0:15,0:14:17.96:0,18,774	0/0:24,0:24:57.20:0,57,2184	0/0:14,0:13:15.04:0,15,544	0/0:6,0:6:3.01:0,3,149	0/0:21,0:20:26.93:0,27,902	0/0:18,0:18:33.11:0,33,1443	0/0:19,0:19:36.12:0,36,1378	0/0:3,0:8:9.03:0,9,352	1/1:10,3:12:6:173,6,0	0/0:14,2:18:0.35:0,0,1	./.	0/0:15,0:15:26.99:0,27,1032	0/0:16,0:16:24.04:0,24,762	0/0:19,0:18:36.10:0,36,1488	0/0:14,0:14:17.85:0,18,798	1/1:14,3:15:6.02:146,6,0	0/1:12,5:17:15.71:74,0,16	1/1:3,2:5:3.01:88,3,0
chr10	99902429	.	G	GGAGA	600.93	PASS	AB=0.875;AC=16;AF=0.308;AN=52;BaseQRankSum=2.389;DP=419;FS=3.064;HRun=0;HaplotypeScore=81.5665;InbreedingCoeff=0.5344;MQ=57.89;MQ0=13;MQRankSum=-0.911;QD=4.45;ReadPosRankSum=-2.430;VQSLOD=1.5626;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,1:17:2.32:66,2,0	0/0:3,0:4:3:0,3,28	./.	./.	0/0:10,0:10:9.01:0,9,120	1/1:12,8:21:6.01:98,6,0	0/0:25,0:25:36.10:0,36,511	0/0:16,0:16:12.03:0,12,166	1/1:14,0:15:11.60:137,12,0	1/1:9,0:9:2.90:16,3,0	0/0:9,0:9:3.01:0,3,47	0/0:16,0:16:24.07:0,24,358	0/0:12,0:14:24.04:0,24,293	1/1:8,4:12:14.85:247,15,0	0/0:17,0:19:30.02:0,30,359	0/0:9,0:9:12.51:0,13,185	0/0:23,0:23:36.08:0,36,519	1/1:9,0:9:9.42:67,9,0	0/0:11,0:12:4.33:0,4,112	0/0:13,0:14:1.82:0,2,5	0/0:14,0:15:3:0,3,28	1/1:17,0:18:8.23:37,8,0	0/1:11,0:12:25.46:25,0,83	0/1:15,0:19:27.58:72,0,28	0/0:12,0:13:6.01:0,6,75	0/0:14,0:13:15.93:0,16,204	0/0:14,0:13:12.03:0,12,168	0/0:9,0:8:18.05:0,18,258
chr10	99903286	.	C	CTTT	1334.56	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.762;DP=636;FS=0.783;HRun=8;HaplotypeScore=100.9211;InbreedingCoeff=0.9875;MQ=82.01;MQ0=0;MQRankSum=-1.368;QD=38.13;ReadPosRankSum=1.982;VQSLOD=3.2439;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.27:0,93,1206	0/0:12,0:12:36.12:0,36,470	0/0:30,0:30:59.97:0,60,748	0/0:14,0:15:32.14:0,32,366	0/0:26,0:26:69.16:0,69,877	0/0:21,0:21:60.17:0,60,770	0/0:32,0:32:93.23:0,93,1200	0/0:38,0:38:81.17:0,81,1036	1/1:1,7:9:18.06:363,18,0	0/0:24,0:24:66.11:0,66,843	0/0:21,0:21:57.12:0,57,703	0/0:20,0:20:54.15:0,54,694	0/0:16,0:16:45.12:0,45,576	0/0:17,0:17:45.10:0,45,560	0/0:21,0:21:53.96:0,54,709	0/0:18,0:18:48.14:0,48,631	0/0:50,0:50:99:0,132,1676	1/1:4,21:26:54.19:1091,54,0	0/0:20,0:21:54.07:0,54,662	0/0:20,0:20:54.12:0,54,692	0/0:23,0:23:63.17:0,63,809	0/0:22,0:22:51.09:0,51,641	0/0:23,0:23:63.17:0,63,799	0/0:25,0:25:72.18:0,72,909	0/0:19,0:19:54.14:0,54,681	0/0:20,0:20:48.13:0,48,618	0/0:26,0:26:66.19:0,66,867	0/0:8,0:8:15.05:0,15,194
chr10	99903313	.	TG	T	5049.25	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.694;DP=657;FS=0.717;HRun=4;HaplotypeScore=67.9618;InbreedingCoeff=0.9984;MQ=82.50;MQ0=0;MQRankSum=-3.251;QD=33.44;ReadPosRankSum=-0.150;VQSLOD=5.2045;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1621	0/0:12,0:12:36.11:0,36,486	0/0:24,0:24:60.20:0,60,841	0/0:21,0:21:54.08:0,54,754	0/0:26,0:26:72.24:0,72,1008	0/0:19,0:19:51.17:0,51,713	0/0:28,0:28:81.26:0,81,1117	1/1:0,28:28:84.26:1007,84,0	0/0:13,0:13:30.04:0,30,379	0/0:25,0:25:75.24:0,75,1032	0/0:23,0:23:63.21:0,63,882	0/0:23,0:23:66.22:0,66,922	0/0:16,0:16:45.15:0,45,630	0/0:22,0:22:66.22:0,66,924	0/0:23,0:23:63.21:0,63,879	0/0:20,0:20:57.19:0,57,795	0/0:48,0:48:99:0,141,1954	0/0:28,0:28:72.24:0,72,1005	1/1:2,24:26:72.21:853,72,0	1/1:1,21:22:60.18:719,60,0	1/1:0,27:27:75.23:900,75,0	0/0:19,0:19:57.19:0,57,793	0/0:23,0:23:66.21:0,66,905	0/0:27,0:27:78.26:0,78,1092	0/0:26,0:26:72.23:0,72,987	1/1:0,18:18:51.13:598,51,0	1/1:0,21:21:63.19:756,63,0	1/1:0,9:9:18.06:216,18,0
chr10	99903466	.	A	AT	9625.16	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-11.313;DP=556;FS=6.242;HRun=0;HaplotypeScore=54.6766;InbreedingCoeff=0.9986;MQ=85.62;MQ0=0;MQRankSum=-0.729;QD=44.15;ReadPosRankSum=1.632;VQSLOD=5.1994;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:78.27:1245,78,0	0/0:10,0:10:27.08:0,27,359	0/0:17,0:17:51.12:0,51,645	0/0:19,0:19:42.13:0,42,568	0/0:16,0:16:48.16:0,48,669	1/1:0,19:19:57.19:910,57,0	0/0:23,0:23:69.23:0,69,964	1/1:1,31:32:93.30:1437,93,0	1/1:0,13:13:33.11:526,33,0	0/0:23,0:23:69.22:0,69,930	0/0:15,0:15:42.13:0,42,572	0/0:17,0:17:51.15:0,51,693	0/0:18,0:18:51.16:0,51,696	0/0:17,0:17:51.13:0,51,659	0/0:21,0:21:63.20:0,63,862	0/0:19,0:19:54.18:0,54,755	0/0:41,0:41:99:0,123,1696	1/1:0,22:22:57.19:910,57,0	1/1:0,19:19:57.19:910,57,0	1/1:0,19:19:51.17:814,51,0	1/1:0,25:25:66.23:1054,66,0	0/0:16,0:16:48.16:0,48,662	0/0:10,0:10:30.10:0,30,414	0/0:36,0:36:99:0,102,1401	0/0:20,0:20:60.17:0,60,798	1/1:0,18:18:54.01:815,54,0	1/1:0,17:17:45.15:718,45,0	1/1:0,7:7:18.06:284,18,0
chr10	99904291	.	TCA	T	1054.66	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.943;DP=728;FS=4.748;HRun=0;HaplotypeScore=91.4052;InbreedingCoeff=0.9996;MQ=74.93;MQ0=0;MQRankSum=-6.290;QD=34.02;ReadPosRankSum=-0.984;VQSLOD=5.3160;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,157,2900	0/0:13,0:13:39.13:0,39,717	0/0:25,0:25:71.49:0,71,1270	0/0:23,0:22:56.55:0,57,990	0/0:22,0:22:66.20:0,66,1172	0/0:18,0:18:54.17:0,54,980	0/0:25,0:25:69.24:0,69,1292	0/0:36,0:36:99:0,108,1966	1/1:2,17:19:54.16:760,54,0	0/0:31,0:31:84.28:0,84,1544	0/0:25,0:25:72.25:0,72,1339	0/0:30,0:30:87.28:0,87,1576	0/0:29,0:29:81.25:0,81,1482	0/0:29,0:29:84.29:0,84,1557	0/0:33,0:33:96.32:0,96,1752	0/0:26,0:26:78.25:0,78,1413	0/0:34,0:34:96.33:0,96,1796	1/1:2,10:12:30.05:416,30,0	0/0:29,0:29:87.28:0,87,1567	0/0:27,0:27:72.12:0,72,1326	0/0:32,0:32:93.32:0,93,1742	0/0:24,0:24:72.21:0,72,1284	0/0:20,0:20:54.19:0,54,1009	0/0:31,0:31:87.30:0,87,1629	0/0:25,0:25:75.24:0,75,1365	0/0:24,0:24:63.19:0,63,1097	0/0:17,0:17:48.64:0,49,883	0/0:13,0:13:36.07:0,36,606
chr10	99904311	.	TTTTG	T	844.77	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.880;DP=726;FS=5.346;HRun=0;HaplotypeScore=120.3606;InbreedingCoeff=0.9956;MQ=68.78;MQ0=1;MQRankSum=-5.286;QD=27.25;ReadPosRankSum=-0.296;VQSLOD=2.9146;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,151,3549	0/0:10,0:10:24.08:0,24,548	0/0:31,0:26:39.65:0,40,727	0/0:28,0:26:34.55:0,35,1025	0/0:24,0:24:63.22:0,63,1547	0/0:17,0:17:48.16:0,48,1122	0/0:23,0:23:57.16:0,57,1236	0/0:40,0:40:73.56:0,74,1829	1/1:2,12:14:36.12:580,36,0	0/0:28,0:28:69.24:0,69,1533	0/0:24,0:24:54.18:0,54,1268	0/0:30,0:30:78.27:0,78,1888	0/0:30,0:30:75.24:0,75,1720	0/0:25,0:25:63.18:0,63,1371	0/0:36,0:36:90.31:0,90,2009	0/0:19,0:20:51.15:0,51,1133	0/0:31,0:32:87.29:0,87,2000	1/1:6,11:17:24.08:386,24,0	0/0:29,0:29:60.17:0,60,1146	0/0:22,0:22:42.03:0,42,978	0/0:33,0:33:84.26:0,84,1892	0/0:25,0:25:63.20:0,63,1433	0/0:21,0:21:51.18:0,51,1247	0/0:29,0:29:78.27:0,78,1847	0/0:28,0:28:69.22:0,69,1573	0/0:27,0:27:69.21:0,69,1497	0/0:17,0:17:45.15:0,45,1071	0/0:8,0:8:21.07:0,21,486
chr10	99904812	.	GTTTGTTTGT	G	511.37	PASS	AB=0.960;AC=5;AF=0.089;AN=56;BaseQRankSum=5.048;DP=620;FS=18.117;HRun=0;HaplotypeScore=171.8232;InbreedingCoeff=0.6843;MQ=71.95;MQ0=0;MQRankSum=-3.721;QD=13.11;ReadPosRankSum=1.378;VQSLOD=1.8400;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.23:0,66,2770	0/0:7,0:7:21.07:0,21,985	0/0:38,0:32:75.25:0,75,2560	0/0:33,0:30:34.93:0,35,1730	0/0:20,0:20:48.16:0,48,2219	0/0:20,0:21:36.12:0,36,1498	0/0:19,0:19:54.19:0,54,2481	0/0:40,0:40:99:0,99,3922	1/1:2,9:11:18.06:522,18,0	0/0:29,0:29:78.27:0,78,3455	0/0:18,0:18:45.15:0,45,2050	0/0:19,0:19:54.19:0,54,2264	0/0:15,0:15:39.13:0,39,1828	0/0:21,0:21:57.20:0,57,2555	0/0:13,0:13:36.12:0,36,1694	0/1:23,1:22:17.80:18,0,2862	0/0:31,0:31:72.25:0,72,3140	1/1:3,1:4:3.01:87,3,0	0/0:27,0:27:60.21:0,60,2464	0/0:34,0:34:90.31:0,90,4132	0/0:17,0:17:45.15:0,45,1933	0/0:22,0:22:60.21:0,60,2645	0/0:15,0:15:33.11:0,33,1457	0/0:21,0:21:60.20:0,60,2627	0/0:19,0:18:39.13:0,39,1744	0/0:32,0:32:93.32:0,93,4095	0/0:34,0:34:90.31:0,90,3936	0/0:8,0:8:24.08:0,24,1128
chr10	99904870	.	GTGT	G	158.96	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=7.009;DP=588;FS=12.655;HRun=0;HaplotypeScore=109.1041;InbreedingCoeff=0.2880;MQ=68.95;MQ0=11;MQRankSum=-2.834;QD=2.24;ReadPosRankSum=-0.490;VQSLOD=1.3066;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:4.34:0,4,173	0/0:11,0:10:30.02:0,30,395	0/0:62,0:24:18.37:0,18,315	0/1:43,0:24:25.95:26,0,132	0/0:21,0:21:59.43:0,59,636	1/1:4,14:18:11.73:191,12,0	0/0:17,0:17:48.08:0,48,719	0/0:24,0:24:25.91:0,26,268	0/1:6,0:6:43.17:46,0,43	0/0:20,0:20:60.11:0,60,877	0/0:21,0:21:44.77:0,45,647	0/0:18,0:18:50.95:0,51,642	0/0:15,0:14:38.29:0,38,507	0/0:22,0:22:57.09:0,57,860	0/0:13,0:13:39.07:0,39,532	0/0:18,0:18:53.12:0,53,842	0/0:29,0:29:65.11:0,65,979	0/1:3,0:3:14.06:14,0,32	0/0:17,0:14:29.09:0,29,231	0/0:30,0:31:23.21:0,23,412	0/0:13,0:13:33.46:0,33,193	0/0:19,0:19:50.69:0,51,692	0/0:13,0:13:38.67:0,39,550	0/0:30,0:30:56.38:0,56,927	0/0:14,0:14:30.03:0,30,440	0/0:23,0:23:14.98:0,15,268	0/0:23,0:23:19.91:0,20,235	0/0:14,0:14:12.96:0,13,125
chr10	99905040	.	T	TGA	1709.76	PASS	AB=0.986;AC=23;AF=0.460;AN=50;BaseQRankSum=2.207;DP=563;FS=1.271;HRun=0;HaplotypeScore=113.8664;InbreedingCoeff=0.6814;MQ=61.55;MQ0=10;MQRankSum=-1.079;QD=7.09;ReadPosRankSum=-1.585;VQSLOD=2.9124;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:11,0:11:17.96:0,18,148	./.	./.	0/0:27,0:28:23.30:0,23,194	1/1:17,1:17:19.77:195,20,0	1/1:18,9:29:27.01:379,27,0	0/1:21,0:21:0:0,0,0	1/1:6,0:6:2.96:19,3,0	0/1:22,0:22:18.12:203,0,18	0/1:21,1:21:71.58:188,0,72	0/0:23,0:24:38.51:0,39,377	0/0:14,0:13:14.01:0,14,73	0/0:14,0:14:14.17:0,14,124	0/0:18,0:19:23.76:0,24,223	0/0:12,0:12:17.88:0,18,180	0/0:23,0:23:36.38:0,36,371	1/1:6,0:6:2.80:7,3,0	1/1:26,0:27:22.30:260,22,0	1/1:20,0:21:22.73:169,23,0	1/1:19,2:22:3.01:45,3,0	0/0:20,0:21:11.82:0,12,113	0/0:20,0:20:18.21:0,18,141	0/0:27,0:27:22.14:0,22,339	0/0:13,0:13:14.71:0,15,142	1/1:18,1:17:18.87:223,19,0	1/1:12,2:18:21.92:202,22,0	1/1:8,0:7:1.25:3,1,0
chr10	99905077	.	GGC	G	570.42	PASS	AB=0.935;AC=21;AF=0.375;AN=56;BaseQRankSum=5.173;DP=525;FS=25.970;HRun=0;HaplotypeScore=122.9942;InbreedingCoeff=-0.2185;MQ=55.84;MQ0=9;MQRankSum=-2.348;QD=1.94;ReadPosRankSum=-1.919;VQSLOD=0.6328;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:13:2.61:11,3,0	0/1:12,0:12:58.84:59,0,242	0/0:31,1:20:47.05:0,47,746	0/0:47,0:20:21.06:0,21,373	0/1:20,1:19:13.08:13,0,543	0/1:18,2:17:2.41:2,0,286	0/0:25,0:25:22.19:0,22,517	0/0:25,0:20:59.75:0,60,882	1/1:6,1:6:1.54:10,2,0	0/1:12,2:14:99:170,0,267	0/1:17,2:19:16.30:16,0,386	0/0:25,1:26:14.72:0,15,754	0/1:15,2:16:48.97:49,0,203	0/1:14,3:17:24.42:24,0,223	0/0:17,0:17:30.33:0,30,466	0/0:18,1:18:2.39:0,2,541	0/1:22,1:24:23.27:23,0,681	1/1:5,1:6:2.98:37,3,0	0/1:16,1:17:36.04:36,0,446	0/1:16,3:19:66.39:168,0,66	0/0:16,0:14:17.63:0,18,265	0/1:16,1:17:0.37:0,0,472	0/0:16,0:15:26.20:0,26,307	0/1:27,1:26:7.59:8,0,679	0/0:8,0:8:21.07:0,21,341	0/1:19,1:19:74.72:75,0,448	0/1:13,0:13:8.56:9,0,210	0/1:7,0:6:14:14,0,55
chr10	99905089	.	GACAAAC	G	1123.36	PASS	AB=0.991;AC=8;AF=0.143;AN=56;BaseQRankSum=6.623;DP=548;FS=1.908;HRun=0;HaplotypeScore=154.7942;InbreedingCoeff=0.0935;MQ=54.51;MQ0=16;MQRankSum=-2.475;QD=9.36;ReadPosRankSum=-0.728;VQSLOD=2.7870;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,3:13:3.48:54,3,0	0/0:9,0:9:10.13:0,10,380	0/0:45,0:23:40.72:0,41,732	0/0:54,0:19:23.11:0,23,351	0/0:16,0:16:43.02:0,43,940	0/0:20,0:17:29.42:0,29,292	0/0:28,0:28:44.01:0,44,1221	0/1:30,0:25:99:199,0,326	0/0:7,0:6:3.85:0,4,11	0/0:16,0:15:39.04:0,39,888	0/0:14,0:14:29.79:0,30,690	0/0:31,0:29:56.01:0,56,1238	0/0:18,0:17:33.87:0,34,781	0/0:20,0:19:31.71:0,32,609	0/0:17,0:17:33.40:0,33,736	0/0:19,0:19:40.98:0,41,965	0/0:26,0:26:54.18:0,54,1422	0/1:3,0:3:0:0,0,0	0/1:17,1:16:39.90:350,0,40	0/0:14,1:15:11.03:0,11,62	0/1:18,0:15:63.09:86,0,63	0/0:15,0:15:35.14:0,35,867	0/0:13,0:12:28.59:0,29,559	0/0:31,0:28:34.15:0,34,966	0/0:9,0:9:1.07:0,1,351	0/1:22,0:22:99:428,0,204	0/1:13,0:13:60.11:132,0,60	0/0:5,0:4:3:0,3,27
chr10	99905093	.	AACACAC	A	1952.38	PASS	AB=0.901;AC=15;AF=0.278;AN=54;BaseQRankSum=5.301;DP=555;FS=6.260;HRun=0;HaplotypeScore=147.6371;InbreedingCoeff=0.5722;MQ=53.84;MQ0=26;MQRankSum=-4.683;QD=10.44;ReadPosRankSum=-1.579;VQSLOD=2.2119;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:13:3.48:54,3,0	0/0:9,0:9:18.02:0,18,298	0/0:45,0:23:25.28:0,25,434	0/1:52,0:19:18.04:18,0,172	0/0:17,0:17:29.78:0,30,668	0/0:21,0:18:17.94:0,18,158	0/0:27,0:27:36.12:0,36,851	0/1:19,10:23:35.31:431,0,35	1/1:7,0:6:2.88:15,3,0	0/0:17,0:16:42.13:0,42,845	0/0:13,0:13:24.06:0,24,489	0/0:30,0:28:44.87:0,45,928	0/0:21,0:19:27.76:0,28,645	0/0:19,0:18:23.97:0,24,511	0/0:18,0:18:21.07:0,21,513	0/0:20,0:19:35.33:0,35,762	0/0:25,0:25:66:0,66,1195	1/1:5,0:3:2.98:22,3,0	1/1:19,0:14:27.09:512,27,0	0/0:13,1:14:2.21:0,2,8	1/1:20,2:14:9:191,9,0	0/0:14,0:14:30.09:0,30,622	0/0:12,0:12:21.05:0,21,431	0/0:31,0:28:36.12:0,36,818	0/0:10,0:9:18:0,18,297	0/1:22,1:22:99:624,0,111	1/1:11,1:11:15.05:254,15,0	./.
chr10	99905109	.	CACACACAGAGAGAGAGAGAG	C	2896.46	PASS	AB=0.842;AC=14;AF=0.259;AN=54;BaseQRankSum=6.201;DP=616;FS=12.561;HRun=0;HaplotypeScore=208.1975;InbreedingCoeff=0.4773;MQ=42.93;MQ0=103;MQRankSum=-4.454;QD=12.70;ReadPosRankSum=1.394;VQSLOD=1.7680;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:23:2.85:52,3,0	0/0:8,0:8:18.06:0,18,351	0/0:26,0:8:22.31:0,22,413	0/1:33,0:9:19.53:20,0,170	0/0:18,0:18:29.41:0,29,910	0/0:18,0:17:18.45:0,18,221	0/0:34,0:25:34.36:0,34,927	0/1:20,0:13:35.43:431,0,35	1/1:6,0:5:2.77:15,3,0	0/0:21,0:19:54.18:0,54,1567	0/0:16,0:16:24.06:0,24,603	0/0:28,0:25:45.60:0,46,1044	0/0:21,0:19:14.62:0,15,782	0/0:18,0:17:22.85:0,23,765	0/0:16,0:16:21.07:0,21,532	0/0:19,0:18:25.01:0,25,831	0/0:31,0:28:76.12:0,76,1455	1/1:5,0:1:2.98:22,3,0	0/1:17,10:14:5.05:705,0,5	0/0:7,8:15:2.69:0,3,9	1/1:60,0:12:9.03:191,9,0	0/0:17,0:16:30.10:0,30,816	0/0:10,0:10:21.05:0,21,568	0/0:52,0:28:36.12:0,36,818	0/0:16,0:13:18:0,18,403	0/1:12,16:24:99:1155,0,181	1/1:13,0:10:18.06:465,18,0	./.
chr10	99905115	.	CAGAGAGAG	C	916.89	PASS	AB=1.000;AC=18;AF=0.563;AN=32;BaseQRankSum=1.663;DP=610;FS=25.218;HRun=0;HaplotypeScore=141.8227;InbreedingCoeff=0.1673;MQ=41.11;MQ0=112;MQRankSum=1.095;QD=3.97;ReadPosRankSum=-0.446;VQSLOD=1.0128;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:0:0,0,0	./.	./.	./.	0/0:15,0:20:0:0,0,0	0/0:11,0:14:1.40:0,1,2	1/1:31,2:24:0.47:2,0,0	./.	./.	0/1:21,0:19:62.37:62,0,92	0/0:12,0:16:0.47:0,0,1	1/1:23,3:25:6.02:104,6,0	1/1:15,0:17:3.01:59,3,0	1/1:16,0:16:2.92:52,3,0	0/0:15,0:17:0:0,0,0	1/1:13,4:18:3.01:57,3,0	0/1:31,0:27:80.65:204,0,81	./.	1/1:24,0:12:6.01:107,6,0	0/0:17,0:16:0.47:0,0,1	./.	./.	./.	./.	./.	1/1:26,0:22:15.04:242,15,0	1/1:12,0:10:6.02:116,6,0	./.
chr10	99905169	.	GGC	G	144.52	PASS	AB=0.944;AC=6;AF=0.107;AN=56;BaseQRankSum=6.362;DP=517;FS=4.675;HRun=0;HaplotypeScore=90.8551;InbreedingCoeff=0.5075;MQ=63.29;MQ0=27;MQRankSum=-3.587;QD=1.59;ReadPosRankSum=-0.931;VQSLOD=1.5465;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:26:33.09:0,33,423	0/0:3,0:3:8.86:0,9,99	0/0:33,0:17:11.18:0,11,360	0/1:57,0:21:31.43:31,0,130	0/0:17,0:17:33.01:0,33,489	0/0:13,0:13:26.44:0,26,338	0/0:26,0:26:47.65:0,48,694	0/0:27,0:19:51.16:0,51,739	1/1:3,6:10:14.95:150,15,0	0/0:20,0:20:35.62:0,36,773	0/0:14,0:14:27.06:0,27,391	0/1:17,1:19:13.32:13,0,399	0/0:10,0:8:6.37:0,6,177	0/0:13,0:12:26.09:0,26,364	0/0:10,0:11:24.05:0,24,352	0/0:15,0:14:26.02:0,26,313	0/0:25,0:23:57.08:0,57,669	1/1:1,2:3:6.02:74,6,0	0/0:18,0:18:43:0,43,588	0/0:16,0:15:35.77:0,36,452	0/0:26,0:24:47.94:0,48,692	0/0:16,0:15:33.04:0,33,465	0/0:17,0:17:27.09:0,27,421	0/0:20,0:17:18.02:0,18,244	0/0:17,0:16:12.91:0,13,262	0/0:21,0:19:46.91:0,47,660	0/0:11,0:10:9.54:0,10,303	0/0:7,0:7:21.07:0,21,272
chr10	99905221	.	GACACACACAC	G	82.98	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.280;DP=546;FS=0.000;HRun=0;HaplotypeScore=154.5835;InbreedingCoeff=0.7357;MQ=55.24;MQ0=23;MQRankSum=-0.154;QD=6.38;ReadPosRankSum=0.704;VQSLOD=2.6402;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:14.22:0,14,215	0/0:8,0:8:18.06:0,18,762	0/0:42,0:16:21.92:0,22,610	0/0:43,0:26:26.35:0,26,894	0/0:17,0:17:39.13:0,39,1396	0/0:15,0:14:24.49:0,24,772	0/0:29,0:26:50.88:0,51,1640	0/0:39,0:36:63.21:0,63,1494	1/1:3,4:7:3.01:86,3,0	0/0:19,0:18:42.10:0,42,1676	0/0:12,0:12:23.87:0,24,871	0/0:23,0:23:57.20:0,57,2312	0/0:15,0:14:27.09:0,27,967	0/0:11,0:11:27.09:0,27,942	0/0:14,0:14:30.10:0,30,1073	0/0:14,0:14:33.11:0,33,1330	0/0:22,0:22:45.15:0,45,1626	1/1:5,1:4:3.01:91,3,0	0/0:16,0:16:24.04:0,24,749	0/0:13,0:13:30.55:0,31,1203	0/0:43,0:35:57.67:0,58,2014	0/0:17,0:16:29.40:0,29,1033	0/0:18,0:18:26.82:0,27,1097	0/0:13,0:11:21.07:0,21,749	0/0:11,0:11:27.08:0,27,1106	0/0:18,0:14:36.12:0,36,1417	0/0:13,0:12:21.03:0,21,751	0/0:14,0:12:9.03:0,9,249
chr10	99905961	.	T	TCC	914.21	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.487;DP=667;FS=3.904;HRun=7;HaplotypeScore=79.7964;InbreedingCoeff=0.9983;MQ=85.79;MQ0=1;MQRankSum=-2.928;QD=28.57;ReadPosRankSum=0.695;VQSLOD=3.5952;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:95.85:0,96,1081	0/0:19,0:19:57.15:0,57,652	0/0:23,0:23:24.01:0,24,657	0/0:26,0:26:62.42:0,62,682	0/0:26,0:26:72.21:0,72,839	0/0:31,0:31:87.23:0,87,992	0/0:24,0:24:60.13:0,60,685	0/0:21,0:21:48.11:0,48,542	1/1:4,10:13:27.09:443,27,0	0/0:24,0:24:69.20:0,69,804	0/0:21,0:21:60.13:0,60,683	0/0:17,0:17:48.14:0,48,559	0/0:16,0:16:45.09:0,45,501	0/0:24,0:24:69.18:0,69,782	0/0:20,0:20:60.17:0,60,689	0/0:16,0:16:45.12:0,45,514	0/0:15,0:15:39.08:0,39,440	1/1:3,13:18:41.11:593,41,0	0/0:23,0:23:51.12:0,51,594	0/0:29,0:29:78.22:0,78,898	0/0:32,0:32:84.22:0,84,968	0/0:23,0:23:69.19:0,69,793	0/0:24,0:24:66.19:0,66,768	0/0:19,0:19:48.09:0,48,544	0/0:35,0:35:99:0,99,1153	0/0:40,0:40:99:0,114,1323	0/0:30,0:30:87.22:0,87,991	0/0:22,0:22:66.20:0,66,769
chr10	99906427	.	C	CAT	1601.49	PASS	AB=0.915;AC=17;AF=0.304;AN=56;BaseQRankSum=5.515;DP=304;FS=0.000;HRun=0;HaplotypeScore=53.9483;InbreedingCoeff=0.4960;MQ=73.90;MQ0=3;MQRankSum=-6.789;QD=12.32;ReadPosRankSum=-1.099;VQSLOD=2.7378;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:30.08:0,30,346	0/0:2,0:2:6.02:0,6,74	0/1:14,0:11:5.01:5,0,25	0/0:25,0:9:0.50:0,0,2	0/0:16,0:18:41.79:0,42,473	0/0:15,0:15:32.93:0,33,381	0/0:2,0:2:6.02:0,6,74	1/1:24,12:37:11.20:680,11,0	1/1:5,0:10:4.60:61,5,0	0/0:9,0:10:29.92:0,30,338	0/0:9,0:10:23.56:0,24,269	0/0:8,0:8:15.05:0,15,186	0/0:5,0:5:9.01:0,9,98	0/0:5,0:5:9.03:0,9,112	0/0:8,0:8:21.07:0,21,260	0/0:6,0:6:9.03:0,9,112	0/0:35,0:35:87.27:0,87,1079	0/1:11,0:11:0.42:44,0,0	0/1:4,3:7:44.13:176,0,44	1/1:1,5:6:15.05:225,15,0	1/1:5,0:5:9.01:138,9,0	0/0:7,0:7:21.07:0,21,260	0/0:5,0:5:15.05:0,15,186	0/0:1,0:1:3.01:0,3,37	0/1:10,0:10:6.09:6,0,305	0/1:6,1:7:54.89:109,0,55	1/1:5,8:13:11.76:187,12,0	1/1:2,7:9:9.03:144,9,0
chr10	99906431	.	T	TATC	556.12	PASS	AB=0.980;AC=15;AF=0.268;AN=56;BaseQRankSum=9.210;DP=303;FS=11.473;HRun=0;HaplotypeScore=61.0696;InbreedingCoeff=0.5818;MQ=74.20;MQ0=3;MQRankSum=-7.251;QD=5.62;ReadPosRankSum=0.042;VQSLOD=0.2230;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:33.10:0,33,523	0/0:2,0:2:6.02:0,6,102	0/0:16,0:12:4.28:0,4,52	0/0:24,0:8:5.70:0,6,59	0/0:18,0:18:51.13:0,51,770	0/0:15,0:15:39.12:0,39,620	0/0:3,0:3:9.01:0,9,126	0/1:30,0:32:99:106,0,198	1/1:5,3:10:15.05:297,15,0	0/0:10,0:10:29.84:0,30,473	0/0:10,0:10:29.84:0,30,453	0/0:7,0:7:21.06:0,21,321	0/0:5,0:5:15.05:0,15,236	0/0:6,0:6:15.05:0,15,236	0/0:9,0:9:27.08:0,27,424	0/0:3,0:3:9.03:0,9,153	0/0:37,0:37:99:0,105,1671	1/1:4,5:10:11.83:212,12,0	0/1:7,0:7:8.62:9,0,107	1/1:6,0:6:6.75:20,7,0	1/1:5,0:5:3.71:13,4,0	0/0:7,0:7:21.07:0,21,358	0/0:6,0:6:18.05:0,18,281	0/0:2,0:2:5.98:0,6,71	0/0:10,0:10:29.13:0,29,466	0/1:8,0:8:2.48:2,0,160	1/1:11,0:12:10.26:45,10,0	1/1:9,0:9:6.29:19,6,0
chr10	99906728	.	C	CTCTGTGTGTG	1467.01	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=5.590;DP=673;FS=0.000;HRun=0;HaplotypeScore=200.6082;InbreedingCoeff=0.5860;MQ=76.13;MQ0=5;MQRankSum=-5.312;QD=16.48;ReadPosRankSum=-1.746;VQSLOD=2.4063;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:99:269,0,369	0/0:4,0:4:12.04:0,12,331	0/0:38,0:25:60.09:0,60,1127	0/0:41,0:35:84.12:0,84,1804	0/0:23,0:23:51.16:0,51,1449	0/1:20,0:20:99:115,0,300	0/0:41,0:41:99:0,114,3008	0/0:28,0:28:74.89:0,75,1395	1/1:20,0:19:36.07:729,36,0	0/0:17,0:17:48.14:0,48,1171	0/0:10,0:10:30.10:0,30,891	0/0:24,0:24:63.17:0,63,1626	0/0:23,0:23:63.18:0,63,1651	0/0:22,0:22:57.16:0,57,1596	0/0:37,0:37:99:0,105,2702	0/0:28,0:28:81.23:0,81,2328	0/0:26,0:26:78.19:0,78,1979	1/1:4,14:20:13.29:487,13,0	0/0:27,0:27:60.90:0,61,1544	0/0:7,0:7:12.04:0,12,268	0/0:66,0:66:99:0,126,2800	0/0:8,0:8:24.08:0,24,728	0/0:3,0:3:9.03:0,9,303	0/0:35,0:35:99:0,102,2703	0/0:17,0:17:39.13:0,39,1149	0/0:13,0:13:39.12:0,39,897	0/0:23,0:22:42.13:0,42,871	0/0:23,0:23:42.13:0,42,1000
chr10	99906739	.	C	CGT	3456.31	PASS	AB=0.627;AC=19;AF=0.339;AN=56;BaseQRankSum=-5.485;DP=678;FS=2.580;HRun=0;HaplotypeScore=92.8390;InbreedingCoeff=0.6352;MQ=62.86;MQ0=8;MQRankSum=-2.700;QD=12.39;ReadPosRankSum=-0.348;VQSLOD=3.5283;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:33:16.04:106,16,0	0/0:6,0:6:14.99:0,15,150	0/0:36,0:21:2.03:0,2,86	0/0:38,0:29:32.08:0,32,357	0/0:23,0:23:42.02:0,42,448	1/1:20,0:23:20.73:166,21,0	0/0:44,0:44:99:0,104,1097	0/1:15,11:26:87.39:310,0,87	1/1:19,0:17:5.01:50,5,0	0/0:19,0:19:32.35:0,32,379	0/0:12,0:12:24.07:0,24,287	0/0:20,0:20:41.93:0,42,457	0/0:20,0:20:45.10:0,45,526	0/0:17,0:20:44.85:0,45,483	0/0:34,0:34:72.17:0,72,838	0/0:25,0:25:63.10:0,63,701	0/0:28,0:28:59.56:0,60,645	1/1:16,0:16:6.82:46,7,0	1/1:10,15:26:46.32:605,46,0	1/1:0,8:8:9.03:144,9,0	0/1:21,48:69:99:881,0,122	0/0:10,0:11:26.78:0,27,279	0/0:5,0:5:15.02:0,15,156	0/0:36,0:36:75.02:0,75,858	0/0:18,0:19:41.93:0,42,460	1/1:2,11:12:0.11:429,0,0	1/1:7,15:22:24.07:368,24,0	0/1:7,16:22:55.38:350,0,55
chr10	99906808	.	T	TCAA	1793.16	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.273;DP=632;FS=2.427;HRun=0;HaplotypeScore=117.1785;InbreedingCoeff=0.9978;MQ=89.92;MQ0=0;MQRankSum=-3.388;QD=56.04;ReadPosRankSum=0.212;VQSLOD=5.5170;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:93.30:0,93,1610	0/0:8,0:8:24.08:0,24,423	0/0:23,0:23:66.23:0,66,1154	0/0:33,0:34:81.58:0,82,1412	0/0:11,0:11:30.10:0,30,529	0/0:18,0:18:45.15:0,45,794	0/0:31,0:31:90.28:0,90,1550	0/0:34,0:34:96.27:0,96,1604	1/1:1,18:21:57.20:1328,57,0	0/0:30,0:30:90.27:0,90,1552	0/0:14,0:14:39.13:0,39,687	0/0:20,0:20:57.20:0,57,994	0/0:16,0:15:45.15:0,45,794	0/0:27,0:27:78.26:0,78,1339	0/0:26,0:26:78.24:0,78,1320	0/0:23,0:23:69.24:0,69,1218	0/0:33,0:33:99:0,99,1684	1/1:0,10:11:27.05:587,27,0	0/0:18,0:18:45.15:0,45,790	0/0:13,0:13:30.10:0,30,529	0/0:52,0:52:99:0,138,2401	0/0:20,0:20:60.21:0,60,1052	0/0:13,0:13:39.13:0,39,686	0/0:29,0:28:87.28:0,87,1503	0/0:14,0:14:42.13:0,42,714	0/0:20,0:20:60.21:0,60,1054	0/0:17,0:17:42.14:0,42,741	0/0:18,0:18:54.14:0,54,900
chr10	99906831	.	CAG	C	523.48	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.324;DP=673;FS=5.408;HRun=0;HaplotypeScore=122.6210;InbreedingCoeff=0.9952;MQ=85.65;MQ0=0;MQRankSum=-2.604;QD=32.72;ReadPosRankSum=1.306;VQSLOD=6.0265;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,2121	0/0:7,0:7:21.07:0,21,385	0/0:27,0:27:72.24:0,72,1293	0/0:30,0:30:75.16:0,75,1283	0/0:14,0:14:36.12:0,36,674	1/1:0,16:16:42.14:618,42,0	0/0:29,0:29:87.30:0,87,1606	0/0:32,0:32:96.33:0,96,1765	0/0:23,0:23:63.21:0,63,1153	0/0:38,0:38:99:0,111,2074	0/0:18,0:18:51.17:0,51,955	0/0:19,0:19:51.17:0,51,955	0/0:18,0:17:51.17:0,51,955	0/0:28,0:28:84.29:0,84,1556	0/0:26,0:26:78.27:0,78,1439	0/0:21,0:21:60.21:0,60,1124	0/0:35,0:35:99:0,102,1899	0/0:13,0:13:30.10:0,30,561	0/0:25,0:25:75.26:0,75,1393	0/0:20,0:20:48.16:0,48,884	0/0:49,0:49:99:0,141,2577	0/0:24,0:24:72.22:0,72,1286	0/0:13,0:13:36.12:0,36,674	0/0:27,0:26:78.27:0,78,1426	0/0:18,0:18:54.19:0,54,996	0/0:23,0:23:69.24:0,69,1287	0/0:18,0:18:47.87:0,48,885	0/0:21,0:21:60.21:0,60,1089
chr10	99907812	.	A	AGG	301.97	PASS	AB=0.984;AC=8;AF=0.143;AN=56;BaseQRankSum=1.366;DP=647;FS=14.909;HRun=10;HaplotypeScore=111.6080;InbreedingCoeff=0.6951;MQ=81.67;MQ0=0;MQRankSum=-0.797;QD=3.08;ReadPosRankSum=-0.813;VQSLOD=-0.6331;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:90.11:0,90,915	0/0:8,0:8:18.01:0,18,183	0/1:30,1:30:28.40:28,0,176	0/1:20,0:19:5.95:6,0,81	0/0:16,0:18:50.59:0,51,480	1/1:8,1:16:14.97:53,15,0	0/0:32,0:33:83.91:0,84,831	0/0:23,1:24:35.21:0,35,359	1/1:6,11:17:9.03:135,9,0	0/0:28,0:27:48.01:0,48,483	0/0:16,0:16:27.04:0,27,275	0/0:29,0:29:69.10:0,69,695	0/0:21,0:21:51.07:0,51,514	0/0:18,0:18:48.10:0,48,488	0/0:19,0:20:50.84:0,51,500	0/0:26,1:27:57.07:0,57,573	0/0:34,0:34:81.13:0,81,812	1/1:5,8:14:15.05:223,15,0	0/0:15,0:16:37.59:0,38,347	0/0:41,0:42:69.03:0,69,688	0/0:21,0:21:45.02:0,45,447	0/0:27,0:27:48.08:0,48,488	0/0:24,0:26:50.56:0,51,481	0/0:34,0:37:89.34:0,89,852	0/0:17,0:17:36.05:0,36,360	0/0:29,0:29:54.07:0,54,549	0/0:13,0:13:27.04:0,27,272	0/0:9,0:10:14.98:0,15,205
chr10	99908196	.	C	CCCAGCA	2401.52	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.729;DP=662;FS=2.708;HRun=0;HaplotypeScore=135.3143;InbreedingCoeff=0.9914;MQ=83.00;MQ0=0;MQRankSum=-7.516;QD=88.95;ReadPosRankSum=0.788;VQSLOD=5.1246;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.33:0,96,2425	0/0:10,0:10:30.10:0,30,744	0/0:25,0:25:44.74:0,45,1720	0/0:13,0:13:39.10:0,39,875	0/0:41,0:41:99:0,114,2814	0/0:18,0:18:54.19:0,54,1328	0/0:21,0:21:63.19:0,63,1476	0/0:32,0:32:96.32:0,96,2367	1/1:0,17:19:54.19:1966,54,0	0/0:32,0:32:93.32:0,93,2363	0/0:28,0:28:78.24:0,78,1891	0/0:21,0:21:60.21:0,60,1538	0/0:19,0:19:57.20:0,57,1450	0/0:22,0:22:60.19:0,60,1485	0/0:25,0:25:75.26:0,75,1923	0/0:12,0:12:36.12:0,36,923	0/0:28,0:28:81.26:0,81,2024	1/1:0,6:7:15.05:554,15,0	0/0:28,0:28:81.26:0,81,2000	0/0:41,0:41:99:0,120,2988	0/0:19,0:19:57.18:0,57,1408	0/0:30,0:30:90.30:0,90,2219	0/0:18,0:18:51.18:0,51,1307	0/0:18,0:18:54.19:0,54,1363	0/0:25,0:25:72.22:0,72,1719	0/0:31,0:31:93.32:0,93,2335	0/0:26,0:26:75.26:0,75,1890	0/0:19,0:19:57.20:0,57,1458
chr10	99908271	.	TTTTG	T	1095.59	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.406;DP=626;FS=0.000;HRun=0;HaplotypeScore=113.2258;InbreedingCoeff=0.9834;MQ=85.49;MQ0=0;MQRankSum=-6.706;QD=37.78;ReadPosRankSum=-1.905;VQSLOD=3.4700;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,2718	0/0:11,0:11:33.11:0,33,842	0/0:21,0:21:60.20:0,60,1405	0/0:23,0:23:40.99:0,41,1140	0/0:31,0:31:93.31:0,93,2402	0/0:21,0:20:63.21:0,63,1600	0/0:15,0:15:42.14:0,42,1057	0/0:41,0:41:99:0,114,2717	1/1:4,18:22:54.19:992,54,0	0/0:25,0:25:75.25:0,75,1922	0/0:28,0:28:78.27:0,78,2032	0/0:21,0:21:51.15:0,51,1241	0/0:18,0:18:51.17:0,51,1289	0/0:17,0:17:45.14:0,45,1082	0/0:18,0:18:51.17:0,51,1294	0/0:12,0:12:30.10:0,30,792	0/0:18,0:18:51.16:0,51,1293	1/1:3,4:7:12.04:220,12,0	0/0:20,0:20:57.17:0,57,1342	0/0:25,0:25:72.22:0,72,1745	0/0:30,0:30:90.30:0,90,2283	0/0:26,0:26:75.24:0,75,1870	0/0:20,0:20:54.19:0,54,1377	0/0:20,0:20:57.20:0,57,1501	0/0:32,0:32:93.28:0,93,2245	0/0:29,0:29:87.28:0,87,2173	0/0:26,0:26:75.23:0,75,1788	0/0:12,0:12:36.07:0,36,786
chr10	99908467	.	GT	G	677.33	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.757;DP=600;FS=1.649;HRun=5;HaplotypeScore=59.8591;InbreedingCoeff=0.9975;MQ=91.35;MQ0=0;MQRankSum=-4.435;QD=24.19;ReadPosRankSum=1.875;VQSLOD=2.7400;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1512	0/0:10,0:10:30.10:0,30,409	0/0:38,0:39:99:0,105,1236	0/0:18,0:18:23.99:0,24,535	0/0:24,0:24:68.96:0,69,902	0/0:18,0:18:51.10:0,51,660	0/0:20,0:20:54.11:0,54,713	0/0:26,0:26:69.18:0,69,840	1/1:0,11:11:27.01:289,27,0	0/0:30,0:30:84.27:0,84,1114	0/0:16,0:16:45.13:0,45,585	0/0:14,0:14:39.11:0,39,502	0/0:16,0:16:42.08:0,42,508	0/0:23,0:23:66.21:0,66,887	0/0:25,0:25:66.20:0,66,871	0/0:16,0:16:48.14:0,48,625	0/0:39,0:39:99:0,105,1305	1/1:0,17:17:45.13:510,45,0	0/0:20,0:20:60.17:0,60,772	0/0:19,0:19:54.15:0,54,692	0/0:17,0:17:51.15:0,51,666	0/0:32,0:32:86.91:0,87,1087	0/0:22,0:22:65.99:0,66,857	0/0:16,0:16:42.14:0,42,574	0/0:26,0:26:75.24:0,75,1009	0/0:18,0:18:54.18:0,54,735	0/0:19,0:18:57.16:0,57,746	0/0:9,0:9:27.09:0,27,369
chr10	99909159	.	GAC	G	506.27	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.126;DP=1117;FS=0.000;HRun=0;HaplotypeScore=162.5670;InbreedingCoeff=0.9956;MQ=79.78;MQ0=6;MQRankSum=-4.006;QD=16.33;ReadPosRankSum=-1.129;VQSLOD=3.4400;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,2281	0/0:18,0:18:51.17:0,51,918	0/0:52,0:32:75.69:0,76,736	0/0:87,0:57:31.16:0,31,1016	0/0:25,0:25:75.24:0,75,1319	0/0:22,0:22:60.19:0,60,1051	0/0:54,0:54:99:0,154,2714	0/0:34,0:34:93.28:0,93,1551	1/1:6,13:19:35.91:375,36,0	0/0:47,0:47:99:0,135,2414	0/0:19,0:19:57.18:0,57,989	0/0:65,0:65:99:0,184,3181	0/0:47,0:47:99:0,138,2454	0/0:39,0:39:99:0,114,2022	0/0:49,0:49:99:0,138,2453	0/0:36,0:36:99:0,105,1846	0/0:31,0:31:93.30:0,93,1627	1/1:2,10:12:18.06:251,18,0	0/0:18,0:18:48.15:0,48,819	0/0:32,0:32:96.33:0,96,1722	0/0:154,0:153:99:0,439,7780	0/0:28,0:28:84.27:0,84,1483	0/0:24,0:24:63.20:0,63,1098	0/0:41,0:41:99:0,117,2051	0/0:38,0:38:99:0,108,1909	0/0:42,0:42:99:0,117,2015	0/0:18,0:18:54.18:0,54,946	0/0:17,0:17:51.17:0,51,908
chr10	99909232	.	C	CCG	205.01	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.357;DP=1080;FS=2.792;HRun=0;HaplotypeScore=140.3755;InbreedingCoeff=0.9601;MQ=71.98;MQ0=1;MQRankSum=-5.383;QD=17.08;ReadPosRankSum=-1.802;VQSLOD=3.3923;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,178,2835	0/0:25,0:24:66.23:0,66,1066	0/0:50,0:43:99:0,110,1593	0/0:46,0:43:97.96:0,98,1421	0/0:29,0:29:84.23:0,84,1295	0/0:24,0:24:72.25:0,72,1174	0/0:55,0:55:99:0,166,2620	0/0:41,0:41:99:0,117,1833	1/1:0,9:9:21.06:235,21,0	0/0:61,0:61:99:0,175,2811	0/0:26,0:26:78.23:0,78,1188	0/0:69,0:69:99:0,206,3272	0/0:42,0:42:99:0,126,1986	0/0:43,0:43:99:0,123,1951	0/0:46,0:46:99:0,138,2241	0/0:39,0:39:99:0,114,1857	0/0:37,0:37:99:0,111,1736	1/1:0,3:3:8.06:82,8,0	0/0:33,0:33:99:0,99,1543	0/0:29,0:29:84.29:0,84,1364	0/0:96,0:96:99:0,286,4528	0/0:33,0:33:93.30:0,93,1493	0/0:27,0:27:79.49:0,79,1214	0/0:46,0:46:99:0,138,2238	0/0:34,0:34:99:0,99,1597	0/0:41,0:41:99:0,117,1907	0/0:22,0:22:66.21:0,66,1043	0/0:13,0:13:39.13:0,39,629
chr10	99909234	.	GGAA	G	224.22	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.149;DP=1081;FS=7.902;HRun=0;HaplotypeScore=158.5648;InbreedingCoeff=0.9816;MQ=71.64;MQ0=1;MQRankSum=-4.745;QD=17.25;ReadPosRankSum=-1.234;VQSLOD=2.6896;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,181,4378	0/0:26,0:25:78.27:0,78,1909	0/0:49,0:43:99:0,103,2245	0/0:44,0:43:74.98:0,75,1967	0/0:29,0:29:84.29:0,84,2047	0/0:24,0:24:72.23:0,72,1680	0/0:57,0:57:99:0,172,4161	0/0:40,0:40:99:0,120,2942	1/1:0,9:9:21.05:226,21,0	0/0:62,0:62:99:0,184,4349	0/0:25,0:25:75.26:0,75,1848	0/0:69,0:69:99:0,195,4956	0/0:42,0:42:99:0,126,2919	0/0:41,0:41:99:0,123,3028	0/0:47,0:47:99:0,141,3287	0/0:39,0:39:99:0,117,2834	0/0:38,0:38:99:0,114,2698	1/1:1,3:4:11.99:114,12,0	0/0:31,0:31:93.27:0,93,2189	0/0:32,0:32:96.33:0,96,2324	0/0:95,0:95:99:0,277,6530	0/0:32,0:32:96.33:0,96,2317	0/0:26,0:26:75.24:0,75,1787	0/0:47,0:47:99:0,141,3384	0/0:34,0:34:99:0,102,2466	0/0:42,0:42:99:0,126,3055	0/0:22,0:22:66.21:0,66,1577	0/0:13,0:13:39.12:0,39,911
chr10	99909477	.	T	TTGAAA	2701.76	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.643;DP=817;FS=5.630;HRun=0;HaplotypeScore=151.8166;InbreedingCoeff=0.9788;MQ=93.69;MQ0=0;MQRankSum=-7.948;QD=67.54;ReadPosRankSum=0.814;VQSLOD=4.5999;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,178,3674	0/0:8,0:8:24.08:0,24,507	0/0:30,0:30:87.29:0,87,1801	0/0:41,0:42:98.72:0,99,1892	0/0:28,0:28:84.29:0,84,1774	0/0:27,0:27:78.22:0,78,1580	0/0:30,0:30:84.28:0,84,1758	0/0:32,0:32:93.30:0,93,1944	1/1:5,26:34:81.28:2472,81,0	0/0:27,0:28:84.28:0,84,1747	0/0:18,0:18:54.19:0,54,1151	0/0:33,0:33:99:0,99,2085	0/0:33,0:33:93.32:0,93,1989	0/0:30,0:30:84.28:0,84,1756	0/0:43,0:43:99:0,117,2526	0/0:38,0:38:99:0,111,2233	0/0:27,0:27:81.18:0,81,1573	1/1:1,4:6:12.04:346,12,0	0/0:32,0:32:96.30:0,96,1946	0/0:22,0:22:63.20:0,63,1312	0/0:31,0:31:93.32:0,93,2001	0/0:27,0:27:69.21:0,69,1403	0/0:22,0:22:63.21:0,63,1329	0/0:36,0:36:99:0,99,2057	0/0:27,0:27:72.25:0,72,1549	0/0:36,0:36:99:0,102,2083	0/0:27,0:27:81.28:0,81,1756	0/0:9,0:9:18.06:0,18,391
chr10	99909792	.	GTGA	G	39.08	PASS	AB=0.933;AC=3;AF=0.056;AN=54;BaseQRankSum=5.471;DP=535;FS=1.206;HRun=0;HaplotypeScore=91.4717;InbreedingCoeff=0.4385;MQ=68.51;MQ0=5;MQRankSum=-3.625;QD=0.95;ReadPosRankSum=1.721;VQSLOD=1.1478;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:54.19:0,54,1048	0/0:6,0:6:18.06:0,18,350	0/0:38,0:24:15.01:0,15,217	./.	0/0:11,0:11:24.07:0,24,432	0/0:9,0:9:18.06:0,18,277	0/0:27,1:28:7.89:0,8,799	0/0:20,0:20:9.03:0,9,175	1/1:27,0:27:17.86:126,18,0	0/0:16,0:16:27.09:0,27,509	0/0:15,0:15:27.09:0,27,523	0/0:26,0:26:57.20:0,57,1107	0/0:13,0:13:24.04:0,24,413	0/0:25,0:25:51.17:0,51,979	0/0:25,1:26:25.95:0,26,1148	0/0:20,0:20:51.16:0,51,957	0/0:17,1:18:4.89:0,5,775	0/0:4,0:4:2.97:0,3,20	0/0:12,0:12:9.03:0,9,158	0/0:18,0:18:45.15:0,45,856	0/0:21,0:21:51.17:0,51,974	0/0:11,0:11:12.04:0,12,233	0/0:10,0:9:12.04:0,12,222	0/0:36,2:39:32.08:0,32,1594	0/1:13,1:14:13.16:13,0,439	0/0:19,0:19:33.11:0,33,641	0/0:18,0:18:39.13:0,39,742	0/0:7,0:7:15.05:0,15,291
chr10	99910127	.	A	AG	1965.83	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=11.554;DP=675;FS=5.206;HRun=4;HaplotypeScore=74.2851;InbreedingCoeff=0.9989;MQ=85.83;MQ0=0;MQRankSum=-3.511;QD=37.80;ReadPosRankSum=2.153;VQSLOD=3.6893;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,1156	0/0:11,0:11:30.08:0,30,340	0/0:22,0:22:60.14:0,60,663	0/0:22,0:22:52.95:0,53,576	0/0:12,0:12:33.03:0,33,374	0/0:19,0:19:48.14:0,48,544	0/0:29,0:29:84.24:0,84,953	0/0:19,0:19:57.16:0,57,647	1/1:1,19:20:60.20:815,60,0	0/0:27,0:27:69.14:0,69,761	0/0:13,0:13:33.09:0,33,374	0/0:29,0:29:81.23:0,81,919	0/0:20,0:20:54.13:0,54,600	0/0:25,0:25:75.21:0,75,850	0/0:30,0:30:81.23:0,81,918	0/0:23,0:23:60.17:0,60,681	0/0:36,0:36:93.22:0,93,1041	1/1:0,32:32:93.31:1272,93,0	0/0:20,0:20:54.14:0,54,604	0/0:19,0:19:48.14:0,48,545	0/0:45,0:45:99:0,123,1395	0/0:14,0:14:42.12:0,42,475	0/0:20,0:20:51.14:0,51,574	0/0:36,0:36:99:0,105,1166	0/0:21,0:21:60.16:0,60,670	0/0:27,0:27:75.21:0,75,848	0/0:36,0:36:99:0,108,1213	0/0:9,0:9:27.06:0,27,296
chr10	99910853	.	T	TC	965.09	PASS	AB=0.900;AC=10;AF=0.179;AN=56;BaseQRankSum=-3.950;DP=460;FS=21.064;HRun=0;HaplotypeScore=60.8530;InbreedingCoeff=0.4315;MQ=62.55;MQ0=17;MQRankSum=2.187;QD=8.54;ReadPosRankSum=1.786;VQSLOD=1.8647;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:64.32:0,64,439	0/0:6,0:6:17.02:0,17,138	0/0:28,0:12:11.73:0,12,151	0/0:27,0:10:19.14:0,19,124	0/0:17,0:16:36.93:0,37,255	0/0:11,0:11:28.69:0,29,218	0/0:19,0:18:46.75:0,47,366	0/1:11,10:21:19.58:183,0,20	0/0:10,0:9:14.64:0,15,108	0/0:15,0:14:30.81:0,31,254	0/0:23,0:23:53.41:0,53,446	0/0:11,0:10:25.35:0,25,183	0/0:13,0:13:29.73:0,30,233	0/0:11,0:11:26.84:0,27,215	0/0:9,0:9:21.70:0,22,166	0/0:16,0:16:41.18:0,41,329	0/0:27,0:27:57.02:0,57,500	0/0:26,0:24:62.76:0,63,399	0/1:22,0:18:24.02:195,0,24	0/1:22,1:23:46.74:230,0,47	1/1:2,0:2:5.99:48,6,0	0/0:3,0:3:9:0,9,80	0/0:9,0:9:20.28:0,20,152	0/0:14,0:12:17.72:0,18,149	0/0:16,0:16:37.38:0,37,289	1/1:20,0:17:25.99:261,26,0	0/1:18,0:17:36.52:142,0,37	1/1:6,0:5:6.85:58,7,0
chr10	99911309	.	C	CTCCG	792.77	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.950;DP=418;FS=4.089;HRun=0;HaplotypeScore=73.0770;InbreedingCoeff=0.7294;MQ=70.32;MQ0=0;MQRankSum=-0.179;QD=27.34;ReadPosRankSum=-0.417;VQSLOD=2.6990;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,16:29:37.37:887,37,0	0/0:3,0:3:6.02:0,6,99	0/0:10,0:9:12.04:0,12,163	0/0:10,0:8:5.85:0,6,65	0/0:19,0:19:42.55:0,43,617	0/0:14,0:14:36.11:0,36,571	0/0:21,0:21:39.09:0,39,571	0/0:20,0:20:33.05:0,33,494	0/0:11,0:11:15.02:0,15,140	0/0:19,0:19:42.14:0,42,695	0/0:12,0:12:33.04:0,33,510	0/0:14,0:14:36.06:0,36,519	0/0:10,0:10:18.04:0,18,272	0/0:16,0:16:36.11:0,36,570	0/0:10,0:10:15.05:0,15,249	0/0:10,0:11:21.06:0,21,326	0/0:31,0:31:69.21:0,69,1112	0/0:6,0:6:12.01:0,12,112	0/0:11,0:10:18.06:0,18,297	0/0:13,0:12:12.04:0,12,199	0/0:25,0:25:60.16:0,60,961	0/0:9,0:9:27.09:0,27,441	0/0:17,0:17:30.07:0,30,465	0/0:24,0:24:48.16:0,48,792	0/0:14,0:14:39.11:0,39,598	0/0:18,0:18:45.15:0,45,746	0/0:11,0:11:24.06:0,24,372	0/0:10,0:10:27.08:0,27,423
chr10	99911319	.	CCG	C	59.42	PASS	AB=0.585;AC=2;AF=0.036;AN=56;BaseQRankSum=5.515;DP=443;FS=4.376;HRun=0;HaplotypeScore=62.6049;InbreedingCoeff=0.0748;MQ=70.65;MQ0=0;MQRankSum=-4.646;QD=4.57;ReadPosRankSum=2.015;VQSLOD=2.0175;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:72.24:0,72,1054	0/0:4,0:4:12.04:0,12,227	0/0:10,0:9:27.05:0,27,427	0/0:14,0:12:16.69:0,17,318	0/0:23,0:23:63.20:0,63,1166	0/0:15,0:15:45.15:0,45,894	0/0:23,0:23:66.22:0,66,1216	0/0:19,0:19:57.19:0,57,1082	0/1:3,5:8:64.48:76,0,64	0/0:18,0:18:54.18:0,54,1062	0/0:14,0:14:42.14:0,42,835	0/0:17,0:17:48.16:0,48,894	0/0:8,0:8:24.08:0,24,469	0/0:17,0:17:51.14:0,51,966	0/0:10,0:10:30.09:0,30,554	0/0:10,0:10:22.68:0,23,507	0/0:32,0:32:93.32:0,93,1826	0/1:1,4:5:8.50:72,0,9	0/0:11,0:10:33.11:0,33,595	0/0:12,0:11:27.07:0,27,456	0/0:27,0:27:81.26:0,81,1556	0/0:9,0:9:27.09:0,27,548	0/0:16,0:16:42.14:0,42,814	0/0:24,0:24:66.23:0,66,1266	0/0:17,0:17:48.16:0,48,920	0/0:21,0:21:63.20:0,63,1182	0/0:15,0:15:43.95:0,44,762	0/0:12,0:12:36.11:0,36,675
chr10	99911322	.	TCC	T	59.32	PASS	AB=0.585;AC=2;AF=0.036;AN=56;BaseQRankSum=5.223;DP=445;FS=6.989;HRun=2;HaplotypeScore=62.9347;InbreedingCoeff=0.0651;MQ=68.50;MQ0=0;MQRankSum=-4.662;QD=4.56;ReadPosRankSum=2.263;VQSLOD=-0.7354;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:75.19:0,75,1047	0/0:4,0:4:12.04:0,12,227	0/0:10,0:9:27.09:0,27,478	0/0:12,0:10:24.04:0,24,342	0/0:21,0:21:60.21:0,60,1148	0/0:17,0:17:51.17:0,51,977	0/0:23,0:23:66.23:0,66,1235	0/0:22,0:22:66.23:0,66,1218	0/1:3,5:8:54.40:76,0,54	0/0:18,0:18:54.18:0,54,1061	0/0:14,0:14:42.14:0,42,835	0/0:17,0:17:51.17:0,51,945	0/0:9,0:9:27.09:0,27,512	0/0:16,0:16:48.16:0,48,956	0/0:9,0:9:27.09:0,27,530	0/0:11,0:11:25.71:0,26,551	0/0:32,0:32:93.32:0,93,1833	0/1:1,4:5:9:72,0,9	0/0:10,0:10:27.05:0,27,490	0/0:10,0:9:21.07:0,21,407	0/0:27,0:27:81.28:0,81,1576	0/0:9,0:9:27.09:0,27,548	0/0:17,0:17:48.12:0,48,878	0/0:24,0:24:66.23:0,66,1273	0/0:17,0:17:51.13:0,51,944	0/0:23,0:23:66.22:0,66,1232	0/0:16,0:16:46.97:0,47,824	0/0:11,0:11:33.11:0,33,651
chr10	99911375	.	G	GCCTGCGTTT	1362.05	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.032;DP=467;FS=5.858;HRun=0;HaplotypeScore=135.0618;InbreedingCoeff=0.9673;MQ=86.89;MQ0=0;MQRankSum=-5.030;QD=97.29;ReadPosRankSum=-1.010;VQSLOD=3.9144;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:81.14:0,81,2216	0/0:5,0:5:12.04:0,12,327	0/0:17,0:18:42.74:0,43,1171	0/0:16,0:16:42.40:0,42,1117	0/0:21,0:21:56.79:0,57,1751	0/0:17,0:17:48.15:0,48,1377	0/0:23,0:23:66.23:0,66,1941	0/0:23,0:23:69.22:0,69,1935	1/1:4,3:8:21.07:854,21,0	0/0:12,0:12:36.09:0,36,973	0/0:13,0:13:30.10:0,30,897	0/0:16,0:16:48.16:0,48,1486	0/0:12,0:12:36.12:0,36,1117	0/0:12,0:12:36.12:0,36,1116	0/0:9,0:9:24.08:0,24,745	0/0:13,0:13:39.12:0,39,1094	0/0:36,0:36:99:0,105,3138	1/1:2,4:6:15.05:625,15,0	0/0:16,0:16:42.13:0,42,1174	0/0:13,0:13:36.12:0,36,1045	0/0:39,0:39:99:0,108,3168	0/0:7,0:7:18.06:0,18,558	0/0:12,0:12:36.11:0,36,1023	0/0:22,0:22:63.17:0,63,1781	0/0:20,0:20:56.90:0,57,1612	0/0:20,0:19:57.20:0,57,1707	0/0:18,0:18:54.19:0,54,1618	0/0:8,0:8:24.08:0,24,716
chr10	99911520	.	ATTTTTC	A	480.67	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=4.577;DP=423;FS=38.445;HRun=0;HaplotypeScore=128.6048;InbreedingCoeff=0.6433;MQ=63.03;MQ0=3;MQRankSum=-4.865;QD=15.02;ReadPosRankSum=2.435;VQSLOD=1.6188;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:60.64:0,61,657	0/0:3,0:3:9.03:0,9,240	0/0:31,0:16:37.68:0,38,680	0/0:25,0:12:20.48:0,20,308	0/0:13,0:13:33.02:0,33,681	0/0:10,0:10:6.17:0,6,385	0/0:19,0:19:31.14:0,31,974	0/0:19,0:19:34.72:0,35,210	1/1:1,6:7:18.06:349,18,0	0/0:15,0:15:36.07:0,36,804	0/0:9,0:9:21.07:0,21,613	0/0:6,0:6:18.06:0,18,500	0/0:9,0:9:24.06:0,24,630	0/0:12,0:12:30.09:0,30,777	0/0:18,0:17:48.15:0,48,1218	0/0:15,0:15:45.13:0,45,1073	0/0:29,0:29:84.19:0,84,1935	1/1:6,4:10:12.04:233,12,0	0/0:19,0:19:39.88:0,40,224	0/0:20,0:20:40.12:0,40,203	0/0:12,0:12:15.30:0,15,88	0/0:11,0:11:33.10:0,33,843	0/0:11,0:11:6.21:0,6,723	0/0:9,0:9:21.53:0,22,509	0/0:11,0:11:21.96:0,22,620	0/0:17,0:16:30.03:0,30,138	0/0:16,0:14:6.90:0,7,58	0/1:15,0:15:21:21,0,39
chr10	99911526	.	CTTTT	C	3580.43	PASS	AB=0.667;AC=19;AF=0.339;AN=56;BaseQRankSum=2.852;DP=429;FS=0.918;HRun=13;HaplotypeScore=104.2013;InbreedingCoeff=0.8704;MQ=65.35;MQ0=3;MQRankSum=-6.582;QD=21.97;ReadPosRankSum=5.115;VQSLOD=2.4571;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:32:14.03:14,0,68	0/0:3,0:4:11.53:0,12,190	0/0:35,0:20:44.10:0,44,676	0/0:22,0:10:14.68:0,15,232	0/0:15,0:16:45.05:0,45,788	0/0:3,0:12:26.59:0,27,209	0/0:18,0:19:36.12:0,36,790	1/1:5,13:18:36.06:519,36,0	1/1:8,0:8:1.11:122,1,0	0/0:14,0:15:32.99:0,33,595	0/0:8,0:10:29.99:0,30,531	0/0:5,0:6:18.06:0,18,387	0/0:8,0:9:24.07:0,24,501	0/0:8,0:10:30.02:0,30,602	0/0:17,0:17:51.17:0,51,1012	0/0:15,0:15:42.09:0,42,858	0/0:25,0:30:76.31:0,76,1468	1/1:9,0:9:11.92:94,12,0	1/1:7,12:19:35.92:505,36,0	1/1:5,15:20:45.03:647,45,0	1/1:2,8:10:18.02:254,18,0	0/0:12,0:13:39.07:0,39,721	0/0:11,0:12:30.10:0,30,616	0/0:8,0:9:21.50:0,21,406	0/0:10,0:11:27.09:0,27,558	1/1:4,13:16:33.03:482,33,0	1/1:1,14:14:36.07:506,36,0	1/1:6,7:14:32.90:436,33,0
chr10	99911692	.	GCT	G	1217.56	PASS	AB=0.964;AC=29;AF=0.604;AN=48;BaseQRankSum=3.124;DP=531;FS=0.917;HRun=0;HaplotypeScore=97.4391;InbreedingCoeff=0.1165;MQ=74.97;MQ0=20;MQRankSum=0.559;QD=3.76;ReadPosRankSum=2.476;VQSLOD=2.1519;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:17:0.47:1,0,0	./.	0/0:47,0:25:0.17:0,0,0	0/0:59,0:27:6.65:0,7,45	./.	0/1:21,0:21:25.89:26,0,142	0/1:26,0:26:6.20:266,0,6	1/1:19,0:23:5.36:27,5,0	0/0:20,0:20:6:0,6,52	0/1:17,2:19:4.32:4,0,368	0/1:7,0:7:21.34:21,0,121	1/1:9,0:9:11.90:109,12,0	1/1:4,6:10:3.01:34,3,0	1/1:7,0:7:9.02:100,9,0	0/1:20,0:19:35.10:35,0,199	1/1:14,0:15:20.73:191,21,0	1/1:17,0:17:18.03:188,18,0	0/0:14,0:14:12.90:0,13,125	1/1:10,0:14:11.36:56,11,0	./.	0/1:14,0:16:0:1,0,0	./.	0/0:11,10:21:0.47:0,0,1	0/1:26,0:24:10.76:11,0,366	0/1:19,0:19:81.84:82,0,117	0/1:26,0:25:8.12:78,0,8	1/1:4,0:13:17.14:87,17,0	1/1:14,0:13:8.52:42,9,0
chr10	99911719	.	CTCTCTCTCGTGTGTGTGT	C	2552.73	PASS	AB=0.931;AC=12;AF=0.222;AN=54;BaseQRankSum=7.234;DP=542;FS=1.347;HRun=0;HaplotypeScore=198.2147;InbreedingCoeff=0.2951;MQ=45.53;MQ0=34;MQRankSum=-5.204;QD=13.72;ReadPosRankSum=0.131;VQSLOD=2.7506;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:17.62:0,18,952	0/0:2,0:2:6.02:0,6,296	0/0:20,0:5:12.93:0,13,297	0/0:34,0:10:17.41:0,17,521	0/1:14,0:14:28.76:29,0,500	0/1:20,0:19:64.45:64,0,632	0/0:31,0:29:62.46:0,62,1473	0/1:25,0:20:0.69:105,0,1	0/0:17,0:17:18.06:0,18,601	0/0:22,0:20:54.19:0,54,2629	0/0:8,0:8:24.08:0,24,1116	0/0:16,0:15:30.10:0,30,1155	0/0:11,0:11:18.06:0,18,1082	0/0:7,0:7:12.04:0,12,364	0/0:28,0:25:48.13:0,48,1945	0/1:24,0:24:29.63:30,0,1763	0/0:21,0:21:51.98:0,52,1755	0/0:16,0:15:36.08:0,36,1355	1/1:17,0:15:0.91:302,1,0	./.	1/1:18,0:18:15.05:252,15,0	0/0:16,0:16:4.70:0,5,217	0/0:18,0:18:5.78:0,6,430	0/0:31,0:28:63.20:0,63,2800	0/0:16,0:15:27.09:0,27,1292	0/1:11,17:26:99:949,0,167	0/1:25,1:22:10.27:551,0,10	1/1:3,8:11:9.03:424,9,0
chr10	99911721	.	CTCTCTCGTGTGTGT	C	1859.27	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=8.605;DP=537;FS=3.022;HRun=0;HaplotypeScore=174.8103;InbreedingCoeff=0.5518;MQ=45.38;MQ0=31;MQRankSum=-4.897;QD=11.27;ReadPosRankSum=1.606;VQSLOD=2.0330;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:20.52:0,21,867	0/0:2,0:2:6.02:0,6,244	0/0:18,0:5:12.93:0,13,203	0/0:31,0:10:17.84:0,18,373	0/0:15,0:15:11.39:0,11,372	0/1:19,0:18:45.37:45,0,452	0/0:32,0:30:49.04:0,49,1067	1/1:24,0:19:1.93:77,2,0	0/0:18,0:18:21.07:0,21,456	0/0:23,0:21:57.20:0,57,2132	0/0:8,0:8:24.08:0,24,848	0/0:16,0:15:29.13:0,29,839	0/0:11,0:11:18.06:0,18,794	0/0:8,0:8:15.05:0,15,360	0/0:28,0:25:36.56:0,37,1448	0/1:24,0:24:15.08:15,0,1296	0/0:19,0:19:35.12:0,35,1237	0/0:16,0:15:33.09:0,33,1027	1/1:16,0:14:21.07:424,21,0	./.	1/1:17,0:15:5.99:53,6,0	0/0:17,0:17:8.16:0,8,286	0/0:19,0:19:5.83:0,6,312	0/0:31,0:28:54.51:0,55,2059	0/0:17,0:16:30.10:0,30,995	0/1:29,0:27:99:538,0,120	1/1:24,0:20:27.96:579,28,0	1/1:12,0:11:9.03:293,9,0
chr10	99911725	.	CTCGT	C	1459.90	PASS	AB=1.000;AC=23;AF=0.426;AN=54;BaseQRankSum=4.646;DP=517;FS=5.858;HRun=0;HaplotypeScore=112.7735;InbreedingCoeff=-0.0479;MQ=45.34;MQ0=29;MQRankSum=0.028;QD=4.17;ReadPosRankSum=0.776;VQSLOD=1.2057;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:19.94:0,20,222	0/0:2,0:2:6.02:0,6,68	1/1:10,0:2:0.47:1,0,0	0/0:25,0:8:7.71:0,8,48	0/0:5,8:13:5.84:0,6,85	0/1:19,0:18:36.98:37,0,139	0/1:30,0:28:99:259,0,127	1/1:25,0:20:4.83:26,5,0	0/1:19,0:18:31.52:67,0,32	0/0:22,0:20:10.65:0,11,548	0/1:8,0:8:9.30:9,0,269	0/1:17,0:16:99:113,0,138	0/0:11,0:11:17.73:0,18,211	0/1:8,0:8:56.92:85,0,57	0/1:25,0:23:12.74:13,0,417	0/1:24,0:24:99:206,0,213	0/1:18,0:18:99:204,0,173	0/0:15,0:14:7.97:0,8,263	1/1:16,0:14:19.89:98,20,0	./.	0/1:18,0:15:0:0,0,0	0/0:7,9:16:5.20:0,5,71	0/0:20,0:20:8.77:0,9,126	0/1:33,0:29:47.55:48,0,638	0/1:16,0:15:99:105,0,219	0/1:28,0:27:5.80:124,0,6	1/1:24,0:20:26.30:144,26,0	1/1:12,0:11:9.01:84,9,0
chr10	99911727	.	CGTGTGTGTGT	C	1292.74	PASS	AB=1.000;AC=9;AF=0.188;AN=48;BaseQRankSum=6.167;DP=514;FS=2.012;HRun=0;HaplotypeScore=149.2489;InbreedingCoeff=0.6355;MQ=45.58;MQ0=28;MQRankSum=-4.749;QD=12.93;ReadPosRankSum=0.024;VQSLOD=2.8444;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:23.42:0,23,1070	0/0:2,0:2:6.02:0,6,296	./.	./.	0/0:15,0:15:5.06:0,5,297	1/1:15,1:19:1.57:86,2,0	0/0:27,0:28:22.32:0,22,846	0/0:25,0:20:0:0,0,0	0/0:13,0:18:15.05:0,15,367	0/0:22,0:20:27.09:0,27,1026	0/0:8,0:8:15.05:0,15,655	0/0:17,0:16:24.08:0,24,887	0/0:12,0:12:21.07:0,21,1026	0/0:8,0:8:8.70:0,9,308	0/0:24,0:22:24.08:0,24,1021	0/0:24,0:24:34.66:0,35,1243	0/0:19,0:19:27.09:0,27,1070	0/0:13,0:13:18.06:0,18,766	1/1:13,0:14:11.98:254,12,0	./.	./.	0/0:16,0:16:5.47:0,5,295	0/0:20,0:20:8.79:0,9,447	0/0:33,0:29:46.06:0,46,1566	0/0:16,0:15:15.05:0,15,592	0/1:28,0:27:59.37:475,0,59	1/1:17,7:20:15.52:395,16,0	1/1:12,0:11:9.03:222,9,0
chr10	99912432	.	A	AT	3693.82	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.104;DP=593;FS=1.293;HRun=7;HaplotypeScore=91.1620;InbreedingCoeff=0.9988;MQ=82.70;MQ0=0;MQRankSum=-8.130;QD=29.55;ReadPosRankSum=-4.418;VQSLOD=1.7827;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,114,1094	0/0:10,0:10:30.05:0,30,290	0/0:19,0:19:38.53:0,39,347	0/0:19,0:19:27.72:0,28,372	0/0:21,0:21:60.09:0,60,579	0/0:25,0:25:69.09:0,69,660	0/0:21,0:21:63.10:0,63,608	1/1:3,19:22:54.17:652,54,0	0/0:25,0:25:66.08:0,66,630	0/0:38,0:38:99:0,99,944	0/0:14,0:14:42.07:0,42,405	0/0:20,0:20:57.08:0,57,545	0/0:10,0:10:24.04:0,24,231	0/0:21,0:21:48.07:0,48,463	0/0:16,0:15:39.06:0,39,377	0/0:27,0:27:75.12:0,75,724	0/0:28,0:28:75.10:0,75,717	0/0:17,0:17:45.07:0,45,435	1/1:5,9:14:30.09:354,30,0	1/1:5,20:25:63.18:747,63,0	1/1:4,9:13:33.06:381,33,0	0/0:27,0:27:78.12:0,78,752	0/0:20,0:20:48.06:0,48,463	0/0:25,0:25:63.07:0,63,600	0/0:23,0:23:65.25:0,65,636	1/1:7,11:18:48.13:558,48,0	1/1:5,17:22:63.07:711,63,0	1/1:3,8:11:24.07:290,24,0
chr10	99912469	.	C	CCCCCCG	7178.16	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=6.061;DP=593;FS=4.724;HRun=0;HaplotypeScore=139.9529;InbreedingCoeff=0.9652;MQ=80.11;MQ0=1;MQRankSum=-10.019;QD=63.52;ReadPosRankSum=-0.826;VQSLOD=4.8297;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:81.26:0,81,1662	0/0:14,0:14:39.13:0,39,865	0/0:37,0:31:65.07:0,65,1201	0/0:24,0:22:45.67:0,46,796	0/0:25,0:25:75.26:0,75,1640	0/0:24,0:24:63.21:0,63,1355	0/0:27,0:27:75.19:0,75,1516	1/1:11,3:15:33.10:796,33,0	0/0:18,0:18:51.17:0,51,1085	0/0:27,0:27:66.21:0,66,1353	0/0:10,0:10:27.08:0,27,528	0/0:20,0:20:51.18:0,51,1130	0/0:6,0:6:18.02:0,18,353	0/0:16,0:16:45.13:0,45,900	0/0:20,0:19:60.19:0,60,1234	0/0:23,0:23:66.23:0,66,1448	0/0:30,0:30:81.26:0,81,1733	0/0:26,0:26:72.14:0,72,1437	1/1:3,7:13:33.04:740,33,0	1/1:4,15:19:42.14:1321,42,0	1/1:5,5:13:21.05:566,21,0	0/0:35,0:35:99:0,99,2101	0/0:14,0:14:39.12:0,39,824	0/0:23,0:23:57.20:0,57,1224	0/0:25,0:25:72.24:0,72,1515	1/1:4,14:21:54.16:1640,54,0	1/1:5,17:27:60.06:2013,60,0	1/1:0,3:5:3.01:102,3,0
chr10	99912585	.	AGAGCT	A	1827.74	PASS	AB=0.516;AC=13;AF=0.232;AN=56;BaseQRankSum=9.557;DP=517;FS=0.632;HRun=0;HaplotypeScore=135.3795;InbreedingCoeff=0.8150;MQ=81.95;MQ0=0;MQRankSum=-5.294;QD=45.69;ReadPosRankSum=2.049;VQSLOD=3.7702;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,4064	0/0:12,0:12:36.10:0,36,1095	0/0:18,0:18:54.18:0,54,1537	0/0:13,0:13:16.19:0,16,981	0/0:26,0:26:78.27:0,78,2348	0/0:23,0:23:69.24:0,69,2250	0/0:26,0:26:78.27:0,78,2580	1/1:0,5:5:14.98:190,15,0	0/0:22,0:22:66.23:0,66,2189	0/0:21,0:21:63.21:0,63,1857	0/0:15,0:15:42.14:0,42,1372	0/0:18,0:18:54.19:0,54,1698	0/0:15,0:15:45.15:0,45,1437	0/0:19,0:19:54.19:0,54,1746	0/0:24,0:24:72.25:0,72,2374	0/0:22,0:22:66.23:0,66,2144	0/0:31,0:31:93.32:0,93,3094	0/0:22,0:22:66.23:0,66,2196	1/1:0,2:2:6.02:127,6,0	1/1:0,7:7:18.02:336,18,0	1/1:3,2:5:9.03:169,9,0	0/0:20,0:20:60.21:0,60,1965	0/0:20,0:20:60.21:0,60,1911	0/0:42,0:41:99:0,126,4144	0/0:27,0:27:81.28:0,81,2662	0/1:1,15:16:51.83:865,0,52	1/1:0,1:1:3.01:62,3,0	1/1:0,4:4:12.04:252,12,0
chr10	99912592	.	CTTGG	C	729.88	PASS	AB=0.519;AC=13;AF=0.232;AN=56;BaseQRankSum=8.897;DP=518;FS=2.536;HRun=0;HaplotypeScore=125.6775;InbreedingCoeff=0.7582;MQ=81.32;MQ0=0;MQRankSum=-8.262;QD=24.33;ReadPosRankSum=4.916;VQSLOD=3.6320;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,3781	0/0:12,0:12:36.12:0,36,982	0/0:14,0:14:42.14:0,42,1024	0/0:15,0:15:42.01:0,42,973	0/0:22,0:22:66.20:0,66,1833	0/0:24,0:24:72.25:0,72,2085	0/0:34,0:34:99:0,102,2896	1/1:2,0:2:0.89:2,1,0	0/0:22,0:22:63.20:0,63,1727	0/0:19,0:19:57.20:0,57,1603	0/0:14,0:14:39.13:0,39,1131	0/0:18,0:18:54.16:0,54,1395	0/0:14,0:14:42.14:0,42,1215	0/0:22,0:22:66.22:0,66,1761	0/0:28,0:28:84.27:0,84,2334	0/0:21,0:21:63.22:0,63,1781	0/0:31,0:31:93.29:0,93,2537	0/0:23,0:23:69.20:0,69,1925	1/1:0,2:2:6.02:68,6,0	1/1:0,5:5:15.04:171,15,0	1/1:0,2:2:5.38:42,5,0	0/0:21,0:21:63.22:0,63,1717	0/0:20,0:20:60.21:0,60,1709	0/0:42,0:41:99:0,126,3642	0/0:28,0:28:84.29:0,84,2290	0/1:1,13:14:44.87:418,0,45	1/1:0,1:1:3.01:36,3,0	1/1:0,4:4:12.04:150,12,0
chr10	99912598	.	TTG	T	192.61	PASS	AB=0.519;AC=11;AF=0.204;AN=54;BaseQRankSum=8.900;DP=521;FS=0.000;HRun=0;HaplotypeScore=109.1436;InbreedingCoeff=0.7623;MQ=84.71;MQ0=0;MQRankSum=-8.196;QD=6.88;ReadPosRankSum=4.790;VQSLOD=2.7239;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,2767	0/0:11,0:11:33.10:0,33,635	0/0:17,0:17:51.16:0,51,951	0/0:17,0:17:27.68:0,28,668	0/0:22,0:22:66.23:0,66,1340	0/0:25,0:25:75.26:0,75,1498	0/0:34,0:34:99:0,102,2072	./.	0/0:21,0:21:63.22:0,63,1238	0/0:21,0:21:63.22:0,63,1281	0/0:14,0:14:39.13:0,39,793	0/0:17,0:17:51.18:0,51,1027	0/0:14,0:14:42.14:0,42,835	0/0:19,0:19:57.20:0,57,1157	0/0:31,0:31:93.31:0,93,1851	0/0:24,0:24:72.25:0,72,1451	0/0:32,0:32:96.33:0,96,1921	0/0:23,0:23:66.18:0,66,1300	1/1:0,2:2:5.68:27,6,0	1/1:0,5:5:14.20:70,14,0	1/1:0,2:2:3.73:16,4,0	0/0:18,0:18:54.19:0,54,1086	0/0:20,0:20:60.21:0,60,1218	0/0:42,0:41:99:0,126,2519	0/0:24,0:24:72.25:0,72,1454	0/1:1,13:14:20.68:154,0,21	1/1:0,1:1:2.88:15,3,0	1/1:0,4:4:11.49:61,11,0
chr10	99912601	.	ACCACAGAGTCAACCTTTGACT	A	4156.58	PASS	AB=0.519;AC=11;AF=0.204;AN=54;BaseQRankSum=8.755;DP=526;FS=1.595;HRun=0;HaplotypeScore=318.2254;InbreedingCoeff=0.7792;MQ=86.52;MQ0=0;MQRankSum=-8.636;QD=148.45;ReadPosRankSum=5.173;VQSLOD=2.9117;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,13143	0/0:10,0:10:30.10:0,30,3013	0/0:18,0:19:55.43:0,55,3021	0/0:18,0:18:48.15:0,48,2356	0/0:22,0:22:66.23:0,66,6518	0/0:24,0:24:72.25:0,72,5880	0/0:33,0:33:99:0,99,9379	./.	0/0:22,0:22:66.23:0,66,5581	0/0:23,0:23:69.24:0,69,6320	0/0:14,0:14:39.12:0,39,2832	0/0:18,0:18:54.19:0,54,5485	0/0:14,0:14:42.14:0,42,3995	0/0:19,0:19:57.20:0,57,5558	0/0:30,0:30:90.31:0,90,8271	0/0:24,0:24:72.25:0,72,6624	0/0:34,0:34:99:0,102,9627	0/0:22,0:22:66.23:0,66,5920	1/1:0,2:2:6.02:310,6,0	1/1:0,5:5:15.05:776,15,0	1/1:0,2:2:6.02:282,6,0	0/0:17,0:17:48.16:0,48,4308	0/0:21,0:21:63.22:0,63,5849	0/0:44,0:43:99:0,132,11154	0/0:23,0:23:69.24:0,69,6088	0/1:1,13:14:99:2001,0,266	1/1:0,1:1:3.01:158,3,0	1/1:0,4:4:12.04:629,12,0
chr10	99913023	.	CGTA	C	1076.63	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.815;DP=651;FS=8.410;HRun=0;HaplotypeScore=93.5296;InbreedingCoeff=0.9991;MQ=90.16;MQ0=0;MQRankSum=-5.267;QD=34.73;ReadPosRankSum=1.989;VQSLOD=4.0631;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,2718	0/0:9,0:9:27.09:0,27,605	0/0:28,0:28:78.25:0,78,1656	0/0:22,0:22:54.13:0,54,1086	0/0:28,0:28:84.29:0,84,1869	0/0:14,0:14:42.12:0,42,896	0/0:29,0:29:84.29:0,84,1903	0/0:31,0:31:84.29:0,84,1876	1/1:0,14:14:36.12:599,36,0	0/0:20,0:20:57.20:0,57,1290	0/0:11,0:11:33.11:0,33,748	0/0:22,0:22:63.22:0,63,1417	0/0:22,0:22:63.22:0,63,1382	0/0:18,0:18:54.15:0,54,1168	0/0:19,0:19:57.20:0,57,1258	0/0:24,0:24:69.24:0,69,1559	0/0:43,0:43:99:0,126,2823	1/1:1,16:17:36.12:599,36,0	0/0:21,0:21:60.21:0,60,1357	0/0:15,0:15:45.15:0,45,1016	0/0:41,0:41:99:0,120,2704	0/0:17,0:17:42.14:0,42,893	0/0:18,0:18:54.19:0,54,1223	0/0:32,0:32:90.31:0,90,2027	0/0:27,0:27:75.26:0,75,1683	0/0:23,0:23:69.24:0,69,1564	0/0:31,0:31:93.32:0,93,2063	0/0:14,0:14:36.12:0,36,815
chr10	99914053	.	CTG	C	6635.01	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=11.073;DP=571;FS=0.000;HRun=0;HaplotypeScore=71.9580;InbreedingCoeff=0.9996;MQ=82.58;MQ0=3;MQRankSum=-3.054;QD=35.11;ReadPosRankSum=0.737;VQSLOD=6.9489;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,2166	0/0:8,0:8:24.08:0,24,432	0/0:17,0:17:45.14:0,45,780	0/0:18,0:18:45.13:0,45,769	0/0:32,0:32:87.30:0,87,1536	1/1:0,21:20:48.16:672,48,0	0/0:20,0:20:60.20:0,60,1056	1/1:5,28:33:81.24:1099,81,0	1/1:4,18:22:60.18:821,60,0	0/0:29,0:29:75.24:0,75,1297	0/0:19,0:19:54.18:0,54,959	0/0:13,0:13:39.13:0,39,686	0/0:17,0:17:48.16:0,48,858	0/0:19,0:19:51.17:0,51,918	0/0:21,0:21:57.20:0,57,1014	0/0:19,0:19:57.20:0,57,1026	0/0:28,0:28:81.28:0,81,1459	1/1:3,15:18:48.16:657,48,0	1/1:0,12:12:33.10:445,33,0	1/1:3,20:23:51.17:714,51,0	1/1:2,12:14:36.12:504,36,0	0/0:25,0:25:66.23:0,66,1183	0/0:19,0:19:54.18:0,54,954	0/0:19,0:19:51.17:0,51,911	0/0:17,0:17:48.16:0,48,841	1/1:0,17:16:48.16:672,48,0	1/1:2,15:16:39.13:546,39,0	1/1:0,12:12:36.12:504,36,0
chr10	99914100	.	G	GTCT	1656.64	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.551;DP=535;FS=0.711;HRun=0;HaplotypeScore=85.6630;InbreedingCoeff=0.9602;MQ=84.67;MQ0=0;MQRankSum=-4.938;QD=47.33;ReadPosRankSum=-0.750;VQSLOD=5.2647;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,123,1938	0/0:7,0:7:21.07:0,21,333	0/0:26,0:26:60.20:0,60,940	0/0:7,0:7:15.05:0,15,238	0/0:27,0:27:75.26:0,75,1189	0/0:19,0:19:42.14:0,42,664	0/0:12,0:12:36.12:0,36,571	0/0:24,0:24:69.24:0,69,1093	1/1:4,15:19:51.15:1033,51,0	0/0:25,0:25:69.23:0,69,1094	0/0:24,0:24:66.21:0,66,1024	0/0:11,0:11:30.09:0,30,453	0/0:12,0:12:36.11:0,36,548	0/0:12,0:12:33.10:0,33,501	0/0:17,0:17:51.17:0,51,807	0/0:19,0:19:48.16:0,48,760	0/0:34,0:34:93.29:0,93,1449	1/1:4,12:16:36.11:745,36,0	0/0:15,0:15:36.11:0,36,550	0/0:27,0:27:73.13:0,73,1143	0/0:12,0:12:30.10:0,30,476	0/0:27,0:27:75.26:0,75,1187	0/0:16,0:16:45.15:0,45,712	0/0:16,0:16:42.14:0,42,666	0/0:19,0:19:45.15:0,45,712	0/0:16,0:16:48.16:0,48,744	0/0:20,0:20:39.13:0,39,618	0/0:9,0:9:9.03:0,9,143
chr10	99914160	.	G	GAA	2455.12	PASS	AB=0.886;AC=19;AF=0.339;AN=56;BaseQRankSum=1.167;DP=561;FS=4.459;HRun=14;HaplotypeScore=102.8564;InbreedingCoeff=0.6691;MQ=70.55;MQ0=2;MQRankSum=-0.092;QD=11.53;ReadPosRankSum=-6.010;VQSLOD=1.1575;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:45:92.90:0,93,401	1/1:3,0:3:3.01:39,3,0	0/0:16,0:13:9.50:0,10,72	0/0:13,0:12:8.51:0,9,57	0/0:25,0:28:34.40:0,34,337	0/1:12,2:25:6.07:190,0,6	0/0:12,0:13:32.59:0,33,259	1/1:11,16:29:65.32:598,65,0	0/0:6,0:16:27.49:0,27,119	0/0:30,0:35:34.71:0,35,352	0/1:25,0:27:14.15:14,0,223	0/0:10,0:10:11.66:0,12,100	0/1:9,0:9:8.86:9,0,85	0/0:15,0:15:0.45:0,0,152	0/0:9,0:12:4.10:0,4,89	0/0:15,0:16:29.65:0,30,237	0/0:34,0:34:68.59:0,69,577	0/0:4,0:17:32.88:0,33,141	1/1:13,0:17:32.99:306,33,0	1/1:12,14:28:47.92:482,48,0	1/1:4,4:11:8.97:88,9,0	0/0:23,0:27:32.48:0,32,359	0/0:12,0:15:12.59:0,13,116	0/0:17,0:18:35.86:0,36,342	0/0:12,0:14:20.68:0,21,177	1/1:10,4:26:24.73:429,25,0	1/1:12,12:27:29.95:293,30,0	1/1:4,3:10:18.04:203,18,0
chr10	99914728	.	AAGAAG	A	1616.51	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.993;DP=669;FS=4.666;HRun=0;HaplotypeScore=127.9757;InbreedingCoeff=0.9986;MQ=88.00;MQ0=0;MQRankSum=-8.363;QD=35.92;ReadPosRankSum=2.189;VQSLOD=3.6869;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:67,0:67:99:0,193,5766	0/0:13,0:13:36.12:0,36,1114	0/0:26,0:26:72.23:0,72,1988	0/0:26,0:25:61.96:0,62,1978	0/0:19,0:19:54.19:0,54,1623	0/0:19,0:19:57.20:0,57,1722	0/0:21,0:21:60.19:0,60,1755	0/0:29,0:29:84.27:0,84,2364	1/1:6,25:31:60.21:1234,60,0	0/0:24,0:24:72.25:0,72,2101	0/0:17,0:17:51.18:0,51,1530	0/0:22,0:22:66.23:0,66,2012	0/0:23,0:23:66.20:0,66,1899	0/0:21,0:21:60.21:0,60,1809	0/0:21,0:21:60.21:0,60,1775	0/0:17,0:17:42.14:0,42,1204	0/0:32,0:32:93.28:0,93,2797	1/1:3,11:14:24.08:503,24,0	0/0:26,0:26:78.26:0,78,2227	0/0:20,0:20:54.19:0,54,1660	0/0:31,0:31:84.29:0,84,2521	0/0:20,0:20:57.20:0,57,1765	0/0:25,0:25:75.26:0,75,2258	0/0:22,0:22:63.20:0,63,1884	0/0:26,0:26:69.24:0,69,2046	0/0:27,0:27:75.26:0,75,2258	0/0:20,0:20:60.21:0,60,1860	0/0:10,0:10:30.10:0,30,930
chr10	99915004	.	GATTA	G	1414.82	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.834;DP=573;FS=7.691;HRun=0;HaplotypeScore=93.9975;InbreedingCoeff=0.9989;MQ=90.65;MQ0=0;MQRankSum=-2.767;QD=42.87;ReadPosRankSum=1.550;VQSLOD=3.5220;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.26:0,75,1992	0/0:16,0:16:48.16:0,48,1289	0/0:20,0:20:57.07:0,57,1281	0/0:27,0:27:72.18:0,72,1640	0/0:30,0:30:90.31:0,90,2381	0/0:20,0:20:57.13:0,57,1466	0/0:21,0:21:63.22:0,63,1607	0/0:21,0:21:60.16:0,60,1492	1/1:2,11:13:30.10:569,30,0	0/0:27,0:26:78.27:0,78,2105	0/0:12,0:12:36.12:0,36,898	0/0:17,0:17:48.16:0,48,1234	0/0:21,0:21:60.21:0,60,1608	0/0:17,0:17:48.16:0,48,1295	0/0:21,0:21:63.22:0,63,1691	0/0:25,0:25:75.26:0,75,1990	0/0:35,0:35:99:0,99,2566	1/1:1,19:20:51.17:967,51,0	0/0:11,0:11:27.09:0,27,719	0/0:16,0:16:48.16:0,48,1288	0/0:12,0:12:36.12:0,36,970	0/0:16,0:16:48.15:0,48,1239	0/0:21,0:21:60.21:0,60,1573	0/0:24,0:24:66.23:0,66,1744	0/0:19,0:19:57.20:0,57,1528	0/0:24,0:24:72.25:0,72,1938	0/0:31,0:31:93.31:0,93,2419	0/0:11,0:11:33.11:0,33,826
chr10	99915101	.	T	TTGTGTG	3619.62	PASS	AB=0.837;AC=22;AF=0.393;AN=56;BaseQRankSum=0.947;DP=695;FS=1.206;HRun=0;HaplotypeScore=172.0569;InbreedingCoeff=0.6371;MQ=68.87;MQ0=7;MQRankSum=-5.379;QD=10.80;ReadPosRankSum=-5.437;VQSLOD=1.2144;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:34:0.92:306,1,0	0/0:8,0:8:11.97:0,12,247	0/1:21,0:17:6.14:6,0,15	0/0:32,0:24:3.01:0,3,41	0/0:26,0:26:45.06:0,45,763	1/1:27,0:35:11.97:270,12,0	0/0:28,0:30:50.95:0,51,966	1/1:28,0:28:25.31:509,25,0	0/1:11,0:24:3.12:3,0,142	0/0:27,0:27:36.09:0,36,651	0/0:18,0:18:20.66:0,21,381	0/0:25,0:28:51.16:0,51,974	0/0:22,0:23:41.75:0,42,810	0/0:18,0:19:33.09:0,33,587	0/0:23,0:23:45.15:0,45,928	0/0:10,0:23:5.99:0,6,12	0/1:31,0:36:31.67:32,0,799	0/1:12,0:20:1.32:48,0,1	1/1:18,1:18:12.03:242,12,0	1/1:17,5:24:5.85:194,6,0	1/1:18,0:22:3.01:98,3,0	0/0:22,0:22:21.07:0,21,433	0/0:14,0:16:27.89:0,28,457	0/0:36,0:37:72.25:0,72,1464	0/0:25,0:26:41.53:0,42,794	1/1:16,5:24:37.34:1039,37,0	1/1:13,10:24:15.05:444,15,0	1/1:13,2:20:15.05:429,15,0
chr10	99915208	.	CGGGT	C	677.26	PASS	AB=0.552;AC=2;AF=0.036;AN=56;BaseQRankSum=8.111;DP=660;FS=6.560;HRun=0;HaplotypeScore=145.9889;InbreedingCoeff=0.1000;MQ=83.92;MQ0=0;MQRankSum=-7.241;QD=23.35;ReadPosRankSum=2.480;VQSLOD=2.7884;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1990	0/0:5,0:5:15.05:0,15,434	0/0:24,0:24:64.42:0,64,1656	0/0:19,0:19:57.18:0,57,1353	0/0:23,0:23:69.24:0,69,1917	0/0:24,0:24:69.24:0,69,1459	0/0:33,0:33:96.29:0,96,2566	0/0:31,0:31:90.09:0,90,1689	0/1:5,13:18:67.80:460,0,68	0/0:30,0:30:90.24:0,90,2497	0/0:13,0:13:36.11:0,36,977	0/0:23,0:23:69.24:0,69,1871	0/0:19,0:19:57.20:0,57,1529	0/0:20,0:20:60.20:0,60,1666	0/0:24,0:24:72.19:0,72,1938	0/0:25,0:25:75.24:0,75,1891	0/0:30,0:30:87.30:0,87,2519	0/1:1,10:11:7.64:306,0,8	0/0:13,0:13:36.12:0,36,707	0/0:18,0:18:51.59:0,52,969	0/0:51,0:51:99:0,138,2752	0/0:22,0:22:66.22:0,66,1805	0/0:21,0:21:62.24:0,62,1716	0/0:33,0:33:96.32:0,96,2588	0/0:29,0:29:87.26:0,87,2454	0/0:26,0:26:75.04:0,75,1412	0/0:25,0:25:75.24:0,75,1515	0/0:15,0:15:45.15:0,45,939
chr10	99915213	.	AGGAGGTCG	A	1286.01	PASS	AB=0.552;AC=2;AF=0.036;AN=56;BaseQRankSum=8.144;DP=654;FS=6.841;HRun=0;HaplotypeScore=196.6207;InbreedingCoeff=0.0118;MQ=83.67;MQ0=0;MQRankSum=-7.844;QD=44.35;ReadPosRankSum=3.120;VQSLOD=2.7927;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,4082	0/0:6,0:6:18.06:0,18,711	0/0:22,0:22:62.24:0,62,2349	0/0:20,0:20:55.74:0,56,1756	0/0:23,0:23:69.22:0,69,2806	0/0:23,0:23:69.24:0,69,3102	0/0:31,0:31:93.28:0,93,3647	0/0:30,0:30:87.29:0,87,3627	0/1:5,13:18:99:820,0,111	0/0:32,0:32:90.31:0,90,3864	0/0:12,0:12:33.11:0,33,1422	0/0:25,0:25:75.26:0,75,3090	0/0:17,0:17:51.18:0,51,2135	0/0:19,0:19:57.20:0,57,2518	0/0:23,0:23:69.24:0,69,3036	0/0:22,0:22:66.23:0,66,2700	0/0:31,0:31:87.30:0,87,3940	0/1:1,10:11:12.80:555,0,13	0/0:16,0:16:45.15:0,45,1572	0/0:18,0:18:51.18:0,51,2060	0/0:49,0:49:99:0,141,6107	0/0:23,0:23:69.24:0,69,2834	0/0:21,0:21:63.22:0,63,2529	0/0:34,0:34:99:0,102,4113	0/0:30,0:30:90.31:0,90,3999	0/0:24,0:24:72.24:0,72,2953	0/0:24,0:24:72.25:0,72,3112	0/0:15,0:15:45.15:0,45,2030
chr10	99915997	.	GT	G	796.22	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.614;DP=769;FS=3.493;HRun=5;HaplotypeScore=79.8364;InbreedingCoeff=0.9742;MQ=79.14;MQ0=0;MQRankSum=-2.854;QD=22.12;ReadPosRankSum=1.438;VQSLOD=2.7835;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,1804	0/0:11,0:11:33.08:0,33,418	0/0:27,0:26:69.17:0,69,887	0/0:31,0:31:78.10:0,78,984	0/0:29,0:29:72.24:0,72,978	0/0:26,0:26:75.24:0,75,1008	0/0:29,0:29:81.27:0,81,1107	0/0:34,0:34:90.28:0,90,1200	1/1:0,15:15:35.94:408,36,0	0/0:19,0:19:57.18:0,57,766	0/0:18,0:18:51.17:0,51,695	0/0:26,0:26:75.23:0,75,986	0/0:38,0:38:99:0,102,1376	0/0:27,0:27:75.18:0,75,971	0/0:33,0:33:90.30:0,90,1221	0/0:33,0:33:90.28:0,90,1200	0/0:41,0:41:99:0,120,1604	1/1:5,16:21:10.15:503,10,0	0/0:24,0:24:69.23:0,69,944	0/0:25,0:25:60.19:0,60,816	0/0:52,0:52:99:0,153,2035	0/0:14,0:14:36.11:0,36,490	0/0:12,0:12:30.10:0,30,408	0/0:47,0:47:99:0,114,1559	0/0:31,0:31:90.28:0,90,1201	0/0:24,0:24:72.21:0,72,952	0/0:27,0:27:78.23:0,78,1034	0/0:9,0:9:24.08:0,24,328
chr10	99916849	.	AC	A	6643.36	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.419;DP=790;FS=2.161;HRun=3;HaplotypeScore=88.9868;InbreedingCoeff=0.9992;MQ=87.29;MQ0=0;MQRankSum=-3.129;QD=34.42;ReadPosRankSum=0.458;VQSLOD=5.1752;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:66:99:0,181,2550	0/0:12,0:12:33.11:0,33,474	0/0:29,0:29:74.90:0,75,1008	0/0:27,0:27:57.44:0,57,824	0/0:25,0:25:75.25:0,75,1077	0/0:17,0:17:51.16:0,51,716	0/0:39,0:39:99:0,114,1638	1/1:3,31:34:90.27:1103,90,0	0/0:28,0:28:81.26:0,81,1148	0/0:35,0:35:99:0,102,1442	0/0:23,0:23:69.23:0,69,993	0/0:31,0:31:90.30:0,90,1293	0/0:28,0:28:84.28:0,84,1207	0/0:25,0:25:72.22:0,72,1011	0/0:26,0:26:78.26:0,78,1122	0/0:21,0:21:63.20:0,63,890	0/0:41,0:41:99:0,117,1621	0/0:24,0:24:69.23:0,69,994	1/1:1,21:22:63.20:781,63,0	1/1:0,25:25:69.22:855,69,0	1/1:0,55:55:99:1971,159,0	0/0:19,0:19:54.18:0,54,772	0/0:21,0:21:63.21:0,63,906	0/0:37,0:37:99:0,111,1599	0/0:23,0:23:69.23:0,69,992	1/1:1,20:21:60.19:743,60,0	1/1:0,26:26:75.24:929,75,0	1/1:1,9:10:21.07:260,21,0
chr10	99917216	.	G	GA	2293.62	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=8.638;DP=484;FS=0.990;HRun=10;HaplotypeScore=78.1855;InbreedingCoeff=0.8623;MQ=57.77;MQ0=8;MQRankSum=-3.431;QD=15.19;ReadPosRankSum=-4.069;VQSLOD=3.0493;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:55.98:0,56,551	0/0:9,0:9:17.98:0,18,148	0/0:12,0:4:5.88:0,6,48	0/0:19,0:5:4.24:0,4,28	0/0:26,0:26:15.88:0,16,337	0/0:17,0:17:35.93:0,36,295	0/0:20,0:20:56.93:0,57,468	1/1:13,12:22:36.06:370,36,0	0/0:1,0:14:18.33:0,18,54	0/0:19,0:19:44.93:0,45,367	0/0:10,0:10:26.97:0,27,222	0/0:12,0:12:26.94:0,27,219	0/0:10,0:10:23.96:0,24,197	0/0:7,0:7:14.97:0,15,121	0/0:11,0:11:25.99:0,26,203	0/0:15,0:15:32.95:0,33,271	0/0:24,0:24:53.92:0,54,443	0/0:1,0:15:8.72:0,9,37	1/1:12,8:19:17.37:356,17,0	1/1:8,17:25:51.01:506,51,0	1/1:10,6:15:18.93:193,19,0	0/0:16,0:16:32.96:0,33,271	0/1:17,0:17:0.10:0,0,148	0/0:15,0:16:37.98:0,38,301	0/0:21,1:22:3.83:0,4,235	1/1:10,9:19:36.06:372,36,0	1/1:9,14:22:51.05:519,51,0	1/1:2,4:6:17.98:169,18,0
chr10	99917248	.	A	AAGTC	7218.88	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-0.959;DP=454;FS=0.000;HRun=0;HaplotypeScore=92.3635;InbreedingCoeff=0.9524;MQ=76.11;MQ0=1;MQRankSum=-6.640;QD=51.56;ReadPosRankSum=-2.839;VQSLOD=5.0128;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:84.13:0,84,1205	0/0:7,0:7:21.06:0,21,345	0/0:26,0:21:12.48:0,12,421	0/0:25,0:19:1.28:0,1,199	0/0:27,0:27:66.18:0,66,1067	0/0:16,0:16:42.13:0,42,715	0/0:20,0:20:51.14:0,51,805	1/1:17,6:22:54.13:993,54,0	1/1:4,6:10:20.99:416,21,0	0/0:9,0:9:21.06:0,21,321	0/0:14,0:14:33.08:0,33,523	0/0:15,0:15:45.13:0,45,744	0/0:8,0:8:15.05:0,15,260	0/0:11,0:11:33.10:0,33,549	0/0:10,0:10:24.07:0,24,399	0/0:18,0:18:36.11:0,36,600	0/0:19,0:19:54.13:0,54,866	1/1:6,2:8:15.01:246,15,0	1/1:5,6:11:27.09:599,27,0	1/1:7,11:19:48.12:1040,48,0	1/1:6,7:12:18.06:454,18,0	0/0:14,0:14:39.13:0,39,687	0/0:14,0:14:33.10:0,33,559	0/0:13,0:13:30.09:0,30,490	0/0:15,0:15:45.08:0,45,697	1/1:10,14:24:66.18:1570,66,0	1/1:13,9:22:54.14:1133,54,0	1/1:0,10:10:30.10:768,30,0
chr10	99917336	.	AGAGG	A	1722.94	PASS	AB=0.889;AC=16;AF=0.320;AN=50;BaseQRankSum=5.486;DP=340;FS=14.794;HRun=0;HaplotypeScore=67.5552;InbreedingCoeff=0.6377;MQ=66.32;MQ0=7;MQRankSum=-3.118;QD=13.46;ReadPosRankSum=0.354;VQSLOD=1.7523;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:39.03:0,39,748	./.	./.	0/0:29,0:15:10.41:0,10,68	0/0:11,0:11:9.47:0,9,123	0/0:18,0:18:30.01:0,30,488	0/0:9,0:9:12.01:0,12,152	1/1:14,0:14:18:181,18,0	./.	0/0:11,0:11:18.06:0,18,420	0/0:9,0:9:15:0,15,303	0/0:8,0:8:15.04:0,15,256	0/0:7,0:7:18.05:0,18,353	0/0:11,0:11:21.06:0,21,448	0/0:8,0:8:6.02:0,6,132	0/0:4,0:4:3.01:0,3,72	0/1:21,2:23:59.32:59,0,573	0/0:1,0:1:2.97:0,3,20	1/1:7,0:6:3:28,3,0	1/1:5,3:8:14.92:161,15,0	1/1:17,1:15:5.85:94,6,0	0/0:9,0:9:12:0,12,192	0/1:5,1:6:40.15:40,0,42	0/0:11,0:11:27.04:0,27,466	0/0:10,0:10:18.04:0,18,330	1/1:20,9:29:15.40:664,15,0	1/1:7,10:17:36.04:524,36,0	1/1:3,3:6:9.03:146,9,0
chr10	99917373	.	GAT	G	1548.42	PASS	AB=1.000;AC=19;AF=0.352;AN=54;BaseQRankSum=10.235;DP=496;FS=1.370;HRun=0;HaplotypeScore=102.9183;InbreedingCoeff=0.9195;MQ=94.70;MQ0=23;MQRankSum=-4.631;QD=11.47;ReadPosRankSum=0.372;VQSLOD=3.3312;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:66.17:0,66,1142	./.	0/0:65,0:29:38.72:0,39,514	0/0:81,0:49:68.32:0,68,980	0/0:11,0:10:30.07:0,30,501	0/0:15,0:15:39.05:0,39,603	0/0:9,0:9:21.01:0,21,338	1/1:21,0:19:21.11:197,21,0	1/1:3,4:7:20.95:232,21,0	0/0:12,0:12:35.45:0,35,518	0/0:16,0:16:31.96:0,32,587	0/0:13,0:13:24.49:0,24,423	0/0:12,0:12:22.31:0,22,415	0/0:15,0:15:45.08:0,45,728	0/0:11,0:11:29.54:0,30,418	0/0:11,0:11:33.04:0,33,463	0/0:23,0:23:44.03:0,44,854	1/1:2,1:3:8.94:81,9,0	1/1:8,0:7:20.31:115,20,0	1/1:11,0:10:23.35:144,23,0	1/1:20,0:18:15.74:120,16,0	0/1:9,0:9:5.50:6,0,237	0/0:9,0:9:21.03:0,21,325	0/0:18,0:18:54.15:0,54,911	0/0:15,0:15:42.12:0,42,740	1/1:27,0:27:66.11:399,66,0	1/1:19,0:18:48.33:320,48,0	1/1:10,0:8:23.21:142,23,0
chr10	99917375	.	TAG	T	3189.88	PASS	AC=18;AF=0.333;AN=54;BaseQRankSum=7.231;DP=497;FS=0.000;HRun=0;HaplotypeScore=97.2367;InbreedingCoeff=0.9485;MQ=94.71;MQ0=22;MQRankSum=-6.279;QD=25.72;ReadPosRankSum=1.010;VQSLOD=4.1279;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:69.21:0,69,1126	./.	0/0:65,0:29:46.72:0,47,592	0/0:80,0:49:62.36:0,62,1164	0/0:11,0:10:30.10:0,30,496	0/0:16,0:16:42.13:0,42,670	0/0:9,0:9:21.04:0,21,345	1/1:4,16:18:48.14:594,48,0	1/1:7,0:7:8.54:75,9,0	0/0:12,0:12:30.10:0,30,480	0/0:16,0:16:41.86:0,42,632	0/0:12,0:12:27.09:0,27,440	0/0:12,0:12:27.09:0,27,441	0/0:15,0:15:39.13:0,39,652	0/0:11,0:11:27.09:0,27,435	0/0:11,0:11:30.10:0,30,496	0/0:23,0:23:60.20:0,60,966	1/1:3,0:3:1.34:14,1,0	1/1:5,4:8:24.08:306,24,0	1/1:4,7:10:23.94:287,24,0	1/1:11,8:17:28.55:337,29,0	0/0:9,0:9:15.05:0,15,248	0/0:9,0:9:21.07:0,21,339	0/0:19,0:19:57.18:0,57,916	0/0:17,0:17:48.15:0,48,778	1/1:7,18:25:66.21:851,66,0	1/1:6,14:20:54.13:657,54,0	1/1:3,7:8:21.07:271,21,0
chr10	99917455	.	CG	C	7492	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.227;DP=547;FS=5.008;HRun=2;HaplotypeScore=69.3456;InbreedingCoeff=0.9977;MQ=84.42;MQ0=0;MQRankSum=-3.112;QD=36.55;ReadPosRankSum=-1.836;VQSLOD=4.7121;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.21:0,75,1098	0/0:7,0:7:18.06:0,18,270	0/0:18,0:18:51.02:0,51,647	0/0:22,0:22:50.66:0,51,610	0/0:18,0:18:54.18:0,54,803	0/0:22,0:22:66.22:0,66,988	0/0:13,0:13:36.08:0,36,513	1/1:0,36:36:99:1365,108,0	1/1:0,10:10:27.09:350,27,0	0/0:16,0:16:48.16:0,48,718	0/0:9,0:9:27.09:0,27,400	0/0:21,0:21:63.21:0,63,943	0/0:15,0:15:42.14:0,42,629	0/0:20,0:20:57.18:0,57,831	0/0:21,0:21:63.20:0,63,920	0/0:18,0:18:54.17:0,54,766	0/0:30,0:30:87.29:0,87,1294	1/1:1,14:15:39.13:506,39,0	1/1:2,14:16:42.14:545,42,0	1/1:0,16:16:48.16:623,48,0	1/1:1,38:38:99:1362,105,0	0/0:16,0:16:45.14:0,45,655	0/0:15,0:15:45.14:0,45,645	0/0:23,0:23:66.22:0,66,987	0/0:13,0:13:39.13:0,39,584	1/1:1,32:33:96.31:1244,96,0	1/1:2,31:32:96.31:1226,96,0	1/1:0,7:7:21.07:270,21,0
chr10	99917713	.	TTGTGTGTGTGTGTGTG	T	1902.52	PASS	AB=0.864;AC=5;AF=0.089;AN=56;BaseQRankSum=6.521;DP=603;FS=0.982;HRun=0;HaplotypeScore=238.6904;InbreedingCoeff=0.3315;MQ=66.52;MQ0=9;MQRankSum=-5.590;QD=18.84;ReadPosRankSum=1.315;VQSLOD=2.5530;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:36:45.14:0,45,2739	0/0:10,0:10:21.07:0,21,1273	0/0:28,0:20:6.02:0,6,244	0/1:36,0:24:4.61:5,0,347	0/0:20,0:19:24.08:0,24,1525	0/1:15,4:20:40.94:448,0,41	0/0:28,0:27:31.92:0,32,1600	0/0:19,0:19:24.08:0,24,1406	1/1:14,12:26:27.09:1187,27,0	0/0:19,0:19:33.11:0,33,1890	0/0:10,0:10:18.06:0,18,1131	0/0:15,0:16:24.08:0,24,1615	0/0:17,0:18:37.01:0,37,2084	0/0:12,0:12:18.03:0,18,725	0/0:28,0:27:54.19:0,54,3646	0/0:21,0:22:42.14:0,42,2639	0/0:36,0:38:72.30:0,72,4237	0/1:14,5:19:99:381,0,260	0/0:14,0:15:24.97:0,25,1191	0/0:8,0:10:15.05:0,15,920	0/0:19,0:29:36.10:0,36,1613	0/0:17,0:19:27.09:0,27,1661	0/0:8,0:10:12.04:0,12,745	0/0:35,0:35:75.24:0,75,5099	0/0:20,0:21:33.10:0,33,1634	0/0:25,0:25:42.14:0,42,2461	0/0:12,0:18:30.10:0,30,1864	0/0:14,0:14:36.12:0,36,2012
chr10	99918061	.	G	GTGCA	1715.42	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.315;DP=678;FS=6.667;HRun=0;HaplotypeScore=112.3675;InbreedingCoeff=0.9866;MQ=87.05;MQ0=0;MQRankSum=-2.929;QD=43.99;ReadPosRankSum=2.167;VQSLOD=4.0795;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:96.19:0,96,1569	0/0:7,0:7:15.05:0,15,265	0/0:30,0:30:64.53:0,65,1002	0/0:21,0:21:36.09:0,36,574	0/0:9,0:9:24.04:0,24,391	0/0:22,0:22:60.21:0,60,1059	0/0:26,0:26:66.12:0,66,1017	0/0:34,0:34:72.14:0,72,1072	1/1:3,16:21:51.18:1300,51,0	0/0:29,0:29:72.23:0,72,1210	0/0:19,0:19:51.14:0,51,809	0/0:32,0:32:90.25:0,90,1518	0/0:35,0:35:93.30:0,93,1569	0/0:25,0:25:69.22:0,69,1183	0/0:19,0:19:51.16:0,51,865	0/0:16,0:16:39.09:0,39,652	0/0:35,0:35:75.15:0,75,1175	1/1:5,9:18:21.07:536,21,0	0/0:21,0:21:51.03:0,51,725	0/0:18,0:18:45.12:0,45,696	0/0:51,0:51:99:0,147,2446	0/0:20,0:20:57.17:0,57,940	0/0:14,0:14:42.12:0,42,712	0/0:39,0:39:90.22:0,90,1463	0/0:18,0:18:51.17:0,51,900	0/0:23,0:23:63.20:0,63,1063	0/0:32,0:32:90.29:0,90,1560	0/0:7,0:7:21.04:0,21,299
chr10	99919320	.	G	GC	1034.10	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.530;DP=695;FS=2.493;HRun=0;HaplotypeScore=63.3546;InbreedingCoeff=0.9295;MQ=62.03;MQ0=16;MQRankSum=0.466;QD=34.47;ReadPosRankSum=1.199;VQSLOD=3.2143;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,166,2288	0/0:13,0:13:39.13:0,39,544	0/0:48,0:8:9.03:0,9,123	0/0:46,0:19:7.03:0,7,477	0/0:20,0:19:54.18:0,54,753	0/0:27,0:27:81.26:0,81,1116	0/0:28,0:28:81.27:0,81,1133	0/0:34,0:31:90.29:0,90,1240	1/1:0,13:13:33.11:496,33,0	0/0:18,0:17:51.17:0,51,712	0/0:31,0:30:90.30:0,90,1256	0/0:23,0:23:69.21:0,69,947	0/0:22,0:22:66.22:0,66,922	0/0:23,0:23:69.23:0,69,957	0/0:24,0:24:72.21:0,72,972	0/0:18,0:18:54.18:0,54,755	0/0:40,2:42:77.20:0,77,1570	1/1:0,17:17:45.15:660,45,0	0/0:22,0:21:63.21:0,63,881	0/0:19,0:19:57.19:0,57,797	0/0:23,0:23:66.22:0,66,922	0/0:25,0:25:69.23:0,69,962	0/0:13,0:13:39.13:0,39,538	0/0:16,0:16:48.16:0,48,670	0/0:23,0:23:69.22:0,69,948	0/0:17,0:15:45.15:0,45,629	0/0:23,0:23:66.22:0,66,923	0/0:10,0:10:30.10:0,30,416
chr10	99919839	.	AC	A	1247.76	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.227;DP=466;FS=13.260;HRun=1;HaplotypeScore=47.6954;InbreedingCoeff=0.9533;MQ=91.94;MQ0=0;MQRankSum=-3.048;QD=37.81;ReadPosRankSum=2.507;VQSLOD=2.8485;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:96.32:1343,96,0	0/0:6,0:6:18.03:0,18,261	0/0:20,0:20:57.17:0,57,845	0/0:20,0:20:37.93:0,38,666	0/0:14,0:14:42.14:0,42,670	0/0:17,0:17:51.16:0,51,791	0/0:17,0:17:51.17:0,51,801	0/0:23,0:23:69.23:0,69,1081	0/0:18,0:18:54.18:0,54,862	0/0:17,0:17:48.16:0,48,748	0/0:8,0:8:24.08:0,24,383	0/0:20,0:20:60.19:0,60,932	0/0:20,0:20:60.20:0,60,945	0/0:13,0:13:39.11:0,39,593	0/0:21,0:20:63.21:0,63,1006	0/0:18,0:18:54.18:0,54,863	0/0:21,0:21:63.21:0,63,997	0/0:19,0:19:57.19:0,57,901	0/0:20,0:20:60.20:0,60,956	0/0:8,0:8:24.08:0,24,383	0/0:22,0:22:66.21:0,66,1024	0/0:16,0:16:48.16:0,48,760	0/0:7,0:7:21.07:0,21,335	0/0:19,0:19:51.17:0,51,807	0/0:8,0:8:24.08:0,24,379	0/0:22,0:22:63.21:0,63,1004	0/0:15,0:15:41.17:0,41,628	0/0:4,0:4:12.04:0,12,192
chr10	99920029	.	TCG	T	3120.06	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=9.373;DP=308;FS=5.757;HRun=0;HaplotypeScore=62.8067;InbreedingCoeff=0.9629;MQ=104.17;MQ0=0;MQRankSum=-5.011;QD=35.06;ReadPosRankSum=0.019;VQSLOD=5.7010;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.23:0,75,1372	0/0:3,0:3:9.03:0,9,165	0/0:19,0:19:57.18:0,57,947	0/0:22,0:21:51.15:0,51,900	0/0:8,0:8:24.08:0,24,439	0/0:7,0:7:21.07:0,21,385	0/0:20,0:20:57.20:0,57,1042	1/1:1,7:8:21.07:301,21,0	1/1:0,13:13:39.13:558,39,0	0/0:11,0:11:33.11:0,33,601	0/0:4,0:4:12.04:0,12,219	0/0:9,0:9:27.09:0,27,494	0/0:12,0:12:30.10:0,30,549	0/0:5,0:5:15.05:0,15,272	0/0:10,0:10:30.10:0,30,529	0/0:8,0:8:18.06:0,18,330	0/0:18,0:18:48.15:0,48,810	1/1:1,10:11:27.09:387,27,0	1/1:2,8:10:24.06:325,24,0	1/1:2,9:11:27.09:387,27,0	1/1:0,17:17:42.14:602,42,0	0/0:5,0:5:12.04:0,12,220	0/0:4,0:4:12.04:0,12,220	0/0:15,0:15:36.12:0,36,660	0/0:13,0:13:39.13:0,39,714	1/1:1,9:10:27.09:387,27,0	1/1:0,5:5:15.05:215,15,0	1/1:0,4:4:12.04:172,12,0
chr10	99920155	.	T	TTC	827.20	PASS	AB=0.970;AC=10;AF=0.185;AN=54;BaseQRankSum=5.344;DP=210;FS=15.706;HRun=0;HaplotypeScore=46.9620;InbreedingCoeff=0.1526;MQ=75.84;MQ0=8;MQRankSum=-1.950;QD=10.09;ReadPosRankSum=0.137;VQSLOD=1.4739;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:39.13:0,39,600	0/0:3,0:3:5.76:0,6,79	0/1:25,0:9:23.23:23,0,104	0/0:38,0:21:21.01:0,21,392	0/0:4,0:4:6.02:0,6,98	0/0:4,0:4:9.02:0,9,146	0/0:7,0:7:21.07:0,21,341	0/1:6,0:7:3.75:4,0,107	1/1:1,7:8:20.74:380,21,0	0/1:4,0:4:23.44:23,0,135	0/0:4,0:4:12:0,12,166	0/0:2,0:2:6.02:0,6,98	0/0:4,0:4:12.04:0,12,194	0/1:5,0:6:14:14,0,132	0/0:3,0:2:6.02:0,6,98	0/1:9,0:9:0.78:1,0,306	0/1:8,0:8:50.71:51,0,209	1/1:2,9:12:25.33:472,25,0	0/0:3,0:3:6.02:0,6,97	0/0:1,0:1:3.01:0,3,49	0/0:3,0:3:6.02:0,6,98	0/0:6,0:7:15.05:0,15,264	0/0:6,0:6:10.97:0,11,238	0/0:4,0:4:9.03:0,9,146	0/0:7,0:7:0.40:0,0,272	0/0:4,0:3:9.03:0,9,147	0/0:9,0:9:27.09:0,27,433	./.
chr10	99920408	.	AAG	A	2019.98	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=1.714;DP=452;FS=11.007;HRun=0;HaplotypeScore=61.7698;InbreedingCoeff=0.7617;MQ=74.98;MQ0=13;MQRankSum=0.798;QD=14.53;ReadPosRankSum=0.020;VQSLOD=2.4636;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:22:322,0,22	0/0:3,0:3:6.01:0,6,79	0/0:42,0:22:56.86:0,57,530	0/0:29,0:15:44.36:0,44,383	0/0:13,0:13:26.83:0,27,269	1/1:14,0:14:6:51,6,0	0/0:20,0:20:50.97:0,51,517	1/1:9,20:29:69.44:595,69,0	0/0:6,0:19:3:0,3,28	0/0:15,0:14:36.87:0,37,294	0/0:9,0:9:20.91:0,21,228	0/0:20,0:20:52.82:0,53,548	0/0:12,0:12:14.47:0,14,164	0/0:14,0:14:38.91:0,39,347	0/0:20,0:20:53.98:0,54,592	0/0:21,0:20:57.08:0,57,654	0/0:20,0:20:44.89:0,45,533	0/0:4,0:14:5.92:0,6,40	1/1:15,0:14:13.91:266,14,0	1/1:7,0:7:11.96:95,12,0	1/1:22,0:21:56.79:447,57,0	0/0:3,0:3:8.98:0,9,73	0/0:10,0:10:20.17:0,20,174	0/0:25,0:25:42.76:0,43,470	0/0:3,0:3:6.01:0,6,80	1/1:0,13:13:35.67:306,36,0	1/1:11,1:12:8.56:88,9,0	1/1:0,3:3:3.01:42,3,0
chr10	99920411	.	AGAGTGTGT	A	1206.13	PASS	AB=0.946;AC=9;AF=0.161;AN=56;BaseQRankSum=0.061;DP=476;FS=1.069;HRun=0;HaplotypeScore=112.2946;InbreedingCoeff=-0.0004;MQ=72.39;MQ0=14;MQRankSum=0.376;QD=7.68;ReadPosRankSum=-0.195;VQSLOD=2.1222;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:99:218,0,976	0/0:4,0:4:6.49:0,6,185	0/0:40,0:20:56.86:0,57,530	0/0:29,0:15:44.18:0,44,381	0/0:13,0:13:26.84:0,27,564	1/1:1,14:16:6.02:154,6,0	0/0:19,0:19:53.28:0,53,1192	0/1:29,0:28:99:474,0,105	0/0:16,0:16:2.97:0,3,109	0/0:15,0:14:31.02:0,31,670	0/0:10,0:10:23.03:0,23,544	0/0:22,0:22:19.89:0,20,1327	0/0:12,0:12:25.72:0,26,470	0/0:15,0:15:38.97:0,39,642	0/0:20,0:20:57.05:0,57,1487	0/0:23,0:22:63.54:0,64,1588	0/0:22,0:22:63.03:0,63,1361	0/0:14,0:13:5.99:0,6,82	0/1:19,0:18:99:118,0,546	0/1:7,0:7:9.61:41,0,10	0/1:30,0:28:99:255,0,501	0/0:4,0:4:9.01:0,9,242	0/0:9,0:9:20.20:0,20,412	0/0:26,0:26:59.53:0,60,1391	0/0:3,0:3:6.02:0,6,241	0/1:15,0:15:77.77:78,0,442	0/1:5,0:13:4.71:5,0,246	0/0:3,0:3:3.01:0,3,55
chr10	99920692	.	T	TA	2384.51	PASS	AB=0.950;AC=20;AF=0.357;AN=56;BaseQRankSum=-4.529;DP=516;FS=0.911;HRun=10;HaplotypeScore=52.6851;InbreedingCoeff=0.8320;MQ=68.75;MQ0=0;MQRankSum=2.133;QD=14.90;ReadPosRankSum=-3.170;VQSLOD=2.9124;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:86.86:0,87,714	0/0:9,0:9:11.96:0,12,99	0/1:8,1:9:4.27:4,0,102	0/1:6,0:6:5.44:5,0,57	0/0:20,0:20:19.04:0,19,362	0/0:23,0:23:47.92:0,48,394	0/0:30,0:31:76.87:0,77,614	1/1:5,14:19:33.07:344,33,0	1/1:0,0:8:8.64:47,9,0	0/0:22,0:22:50.93:0,51,419	0/0:15,0:15:35.52:0,36,279	0/0:16,0:15:35.94:0,36,296	0/0:22,0:22:44.89:0,45,369	0/0:10,0:10:23.91:0,24,191	0/0:22,1:23:24.26:0,24,410	0/0:21,1:23:42.55:0,43,426	0/0:28,0:28:56.86:0,57,459	1/1:6,0:17:19.89:100,20,0	1/1:3,13:17:41.93:424,42,0	1/1:5,9:14:2.34:207,2,0	1/1:2,20:22:42.11:448,42,0	0/0:31,0:32:76.93:0,77,622	0/0:21,0:22:37.92:0,38,299	0/0:11,0:11:29.97:0,30,246	0/0:13,0:13:32:0,32,252	1/1:5,13:18:17.46:384,17,0	1/1:4,17:21:39.06:403,39,0	1/1:1,8:9:21.05:224,21,0
chr10	99920889	.	A	ATC	186.97	PASS	AB=0.994;AC=12;AF=0.214;AN=56;BaseQRankSum=2.818;DP=535;FS=1.648;HRun=0;HaplotypeScore=303.3466;InbreedingCoeff=0.2776;MQ=33.41;MQ0=6;MQRankSum=-1.320;QD=1.25;ReadPosRankSum=0.335;VQSLOD=2.1719;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,5:23:4.34:130,4,0	0/0:19,0:19:6.72:0,7,137	0/0:15,0:6:7.43:0,7,83	0/0:16,0:6:2.56:0,3,38	0/0:14,0:14:11.93:0,12,88	0/0:14,0:14:8.81:0,9,70	0/0:22,0:22:25.70:0,26,204	1/1:23,0:23:5.69:76,6,0	0/1:10,0:10:2.69:26,0,3	0/0:24,0:24:16.94:0,17,290	0/0:25,0:24:27.08:0,27,193	0/0:22,0:21:18.11:0,18,173	0/1:26,1:27:32.87:33,0,178	0/0:24,0:24:26.05:0,26,196	0/0:25,0:25:26.67:0,27,225	0/0:24,0:24:14.68:0,15,220	0/1:18,0:18:9.26:9,0,143	0/1:8,0:8:10.57:11,0,14	0/1:13,0:11:0.87:17,0,1	0/0:15,0:15:13:0,13,39	0/0:30,0:30:5.37:0,5,20	0/0:27,0:27:33.88:0,34,302	0/0:21,0:21:36.95:0,37,287	0/0:30,0:30:9.56:0,10,76	0/0:13,0:13:8.09:0,8,63	0/1:20,0:19:12.97:13,0,28	1/1:8,0:8:3.29:17,3,0	0/0:5,0:5:3.60:0,4,10
chr10	99920892	.	TACAC	T	1534.62	PASS	AB=0.837;AC=15;AF=0.268;AN=56;BaseQRankSum=2.954;DP=548;FS=21.537;HRun=0;HaplotypeScore=299.1673;InbreedingCoeff=0.5886;MQ=34.63;MQ0=9;MQRankSum=-2.383;QD=11.45;ReadPosRankSum=0.619;VQSLOD=1.6541;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:14:0,14,255	0/1:17,1:19:22.63:23,0,468	0/0:14,0:5:3.01:0,3,44	0/0:21,0:8:9.03:0,9,128	0/0:14,0:14:6.08:0,6,213	0/0:13,0:14:12.04:0,12,268	0/0:22,0:22:24.55:0,25,576	1/1:17,6:23:17.98:214,18,0	0/1:6,0:9:16.48:38,0,16	0/0:25,0:25:60.14:0,60,1207	0/0:23,0:25:36.27:0,36,698	0/0:24,0:24:28.55:0,29,671	0/0:24,0:26:32.58:0,33,653	0/0:21,0:22:32.90:0,33,708	0/0:25,0:25:30.05:0,30,700	0/0:25,0:25:29.45:0,29,723	0/0:19,0:19:18.06:0,18,409	0/1:5,0:6:15.12:22,0,15	0/0:13,0:10:1.25:0,1,3	1/1:8,6:15:24.05:367,24,0	1/1:19,10:30:10.95:168,11,0	0/0:27,1:29:42.86:0,43,935	0/0:22,0:23:45.31:0,45,939	0/0:30,0:30:11.65:0,12,263	0/0:15,0:15:9.33:0,9,229	1/1:5,15:18:45.15:729,45,0	1/1:4,3:7:3.01:36,3,0	1/1:2,2:5:9.02:116,9,0
chr10	99920911	.	A	ATG	157.79	PASS	AB=0.750;AC=3;AF=0.054;AN=56;BaseQRankSum=10.294;DP=704;FS=18.667;HRun=0;HaplotypeScore=274.2604;InbreedingCoeff=0.5573;MQ=42.23;MQ0=19;MQRankSum=-6.044;QD=9.28;ReadPosRankSum=-5.628;VQSLOD=1.0660;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:2.86:0,3,232	0/0:20,0:20:38.42:0,38,564	0/0:36,0:11:30.08:0,30,412	0/0:51,0:18:36.96:0,37,553	0/0:17,0:17:30.03:0,30,460	0/0:17,0:17:22.53:0,23,352	0/0:29,0:29:50.23:0,50,860	0/0:26,0:26:63.05:0,63,783	1/1:10,1:11:17.33:200,17,0	0/0:30,0:29:81.27:0,81,1251	0/0:25,0:24:41.18:0,41,705	0/0:35,0:34:64.80:0,65,1030	0/0:34,0:34:60.94:0,61,998	0/0:25,0:25:49.17:0,49,782	0/0:27,0:27:31.12:0,31,572	0/0:30,0:30:52.32:0,52,823	0/0:16,1:17:31.27:0,31,479	0/1:4,2:6:19.77:61,0,20	0/0:16,0:10:27.02:0,27,336	0/0:17,0:17:31.64:0,32,303	0/0:52,0:52:86.31:0,86,1195	0/0:35,0:35:68.14:0,68,1110	0/0:27,0:27:62.13:0,62,998	0/0:29,0:29:26.09:0,26,458	0/0:19,0:19:25.50:0,26,390	0/0:26,0:24:68.73:0,69,677	0/0:12,0:12:18.03:0,18,213	0/0:8,0:8:14.96:0,15,160
chr10	99920921	.	ATG	A	393.24	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.311;DP=753;FS=4.810;HRun=0;HaplotypeScore=242.9941;InbreedingCoeff=0.9813;MQ=49.78;MQ0=15;MQRankSum=-3.912;QD=14.56;ReadPosRankSum=-1.348;VQSLOD=3.0438;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:30.44:0,30,436	0/0:17,0:17:39.84:0,40,660	0/0:45,0:16:47.95:0,48,827	0/0:67,1:31:54.91:0,55,956	0/0:19,1:20:43.72:0,44,679	0/0:18,1:19:30.22:0,30,499	0/0:31,0:31:77.14:0,77,1156	0/0:23,0:23:31.63:0,32,809	1/1:15,0:15:20.85:214,21,0	0/0:28,0:27:78.26:0,78,1476	0/0:24,0:23:53.05:0,53,880	0/0:39,2:40:99:0,105,1679	0/0:36,0:36:77.93:0,78,1188	0/0:26,0:26:42.20:0,42,1022	0/0:25,1:26:59.77:0,60,980	0/0:27,2:29:72.05:0,72,1203	0/0:19,0:19:42:0,42,628	1/1:12,0:12:26.95:299,27,0	0/0:19,0:15:41.82:0,42,693	0/0:17,0:17:32.38:0,32,406	0/0:56,0:56:99:0,103,1449	0/0:33,0:33:72.82:0,73,1273	0/0:29,0:29:75.78:0,76,1246	0/0:28,0:28:38.25:0,38,608	0/0:21,0:21:41.43:0,41,610	0/0:27,0:26:45.96:0,46,721	0/0:12,0:12:12.54:0,13,223	0/0:11,0:11:24.50:0,25,292
chr10	99920922	.	TGCAC	T	693.39	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.425;DP=749;FS=7.562;HRun=0;HaplotypeScore=258.5721;InbreedingCoeff=0.9515;MQ=51.03;MQ0=14;MQRankSum=-2.454;QD=25.68;ReadPosRankSum=-0.400;VQSLOD=2.3405;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:30.44:0,30,713	0/0:17,0:17:40.95:0,41,1007	0/0:46,0:17:51.17:0,51,1290	0/0:66,0:33:73.72:0,74,1522	0/0:19,0:19:43.56:0,44,1002	0/0:19,0:19:30.24:0,30,741	0/0:31,0:31:76.21:0,76,1682	0/0:22,0:23:61.49:0,61,1227	1/1:3,12:15:21.07:356,21,0	0/0:27,0:26:78.22:0,78,2099	0/0:25,0:24:65.09:0,65,1410	0/0:42,0:41:99:0,107,2463	0/0:36,0:36:84.23:0,84,1909	0/0:25,0:25:63.08:0,63,1579	0/0:25,0:25:59.77:0,60,1418	0/0:29,0:29:72.07:0,72,1726	0/0:19,0:19:41.90:0,42,880	1/1:7,5:12:14.91:454,15,0	0/0:18,0:14:42.14:0,42,997	0/0:17,0:17:8.07:0,8,411	0/0:56,0:56:99:0,100,2088	0/0:32,0:32:75.57:0,76,1891	0/0:28,0:28:78:0,78,1911	0/0:28,0:28:38.59:0,39,876	0/0:20,0:20:41.92:0,42,983	0/0:27,0:26:49.63:0,50,875	0/0:14,0:14:23.75:0,24,446	0/0:11,0:11:24:0,24,403
chr10	99921005	.	A	AAC	10042.49	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-6.262;DP=813;FS=2.982;HRun=0;HaplotypeScore=124.5157;InbreedingCoeff=0.9989;MQ=58.16;MQ0=3;MQRankSum=-1.326;QD=34.99;ReadPosRankSum=-0.093;VQSLOD=6.8466;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:48.15:594,48,0	0/0:11,0:11:30.10:0,30,393	0/0:42,0:33:61.90:0,62,863	0/0:56,0:41:73.24:0,73,910	0/0:32,0:32:90.16:0,90,1113	1/1:22,0:22:45.14:564,45,0	0/0:22,0:22:54.16:0,54,695	1/1:4,25:31:84.26:1379,84,0	1/1:6,18:24:57.19:960,57,0	0/0:31,0:31:81.26:0,81,1053	0/0:21,0:21:57.19:0,57,746	0/0:37,0:37:87.21:0,87,1105	0/0:31,0:31:81.26:0,81,1062	0/0:35,0:35:90.12:0,90,1149	0/0:31,0:31:78.19:0,78,1003	0/0:28,0:28:74.98:0,75,902	0/0:29,0:29:81.25:0,81,1050	1/1:6,13:19:48.09:750,48,0	1/1:8,6:14:24.04:370,24,0	1/1:2,15:18:45.15:749,45,0	1/1:13,70:84:99:2552,151,0	0/0:33,0:33:93.26:0,93,1203	0/0:27,0:27:72.23:0,72,945	0/0:32,0:32:84.27:0,84,1104	0/0:28,0:28:69.15:0,69,847	1/1:3,19:22:20.70:869,21,0	1/1:3,15:18:45.15:755,45,0	1/1:0,13:13:30.10:500,30,0
chr10	99921013	.	C	CAT	6763.21	PASS	AB=0.993;AC=18;AF=0.321;AN=56;BaseQRankSum=12.493;DP=794;FS=0.000;HRun=0;HaplotypeScore=136.1708;InbreedingCoeff=0.6702;MQ=60.95;MQ0=4;MQRankSum=-1.485;QD=24.42;ReadPosRankSum=1.141;VQSLOD=5.0744;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:48.16:960,48,0	0/0:10,0:10:30.10:0,30,485	0/0:42,0:33:53.30:0,53,1008	0/0:53,0:41:83.05:0,83,1205	0/0:31,0:31:90.25:0,90,1379	1/1:0,22:22:45.15:910,45,0	0/0:26,0:26:72.09:0,72,1000	0/1:32,0:33:11.82:739,0,12	1/1:22,0:23:25.10:562,25,0	0/0:28,0:28:84.23:0,84,1320	0/0:21,0:21:60.11:0,60,905	0/0:33,0:33:93.08:0,93,1395	0/0:34,0:34:93.14:0,93,1344	0/0:32,0:32:93.26:0,93,1419	0/0:30,0:30:81.26:0,81,1261	0/0:27,0:27:75.23:0,75,1121	0/0:33,0:33:93.24:0,93,1397	1/1:18,0:20:10.01:414,10,0	0/1:15,0:15:72.64:185,0,73	1/1:17,0:17:28.03:432,28,0	1/1:73,0:74:99:1425,109,0	0/0:34,0:34:99:0,99,1543	0/0:26,0:26:75.22:0,75,1165	0/0:29,0:29:84.29:0,84,1358	0/0:26,0:26:69.23:0,69,1095	0/1:21,0:21:40.49:468,0,40	0/1:20,0:20:19.91:364,0,20	1/1:12,0:12:30.03:305,30,0
chr10	99921052	.	A	AC	1843.31	PASS	AB=0.758;AC=17;AF=0.304;AN=56;BaseQRankSum=9.454;DP=663;FS=1.460;HRun=7;HaplotypeScore=121.4789;InbreedingCoeff=0.8787;MQ=69.51;MQ0=1;MQRankSum=-3.617;QD=10.02;ReadPosRankSum=-4.403;VQSLOD=0.9181;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:41.20:0,41,226	0/0:8,0:8:21.03:0,21,202	0/0:33,0:32:51.09:0,51,557	0/0:38,0:35:61.54:0,62,602	0/0:22,0:22:57.06:0,57,538	0/0:22,0:22:29.27:0,29,225	0/0:27,0:27:69.11:0,69,665	1/1:15,5:20:20.35:219,20,0	1/1:21,0:21:38.34:250,38,0	0/0:22,0:22:57.08:0,57,547	0/0:21,0:21:51:0,51,492	0/0:25,0:25:63.08:0,63,601	0/0:27,0:27:66.02:0,66,618	0/0:38,0:38:99:0,105,1005	0/0:29,0:29:81.12:0,81,776	0/0:23,0:23:66.10:0,66,635	0/0:31,0:31:87.14:0,87,840	1/1:18,0:18:41.26:263,41,0	1/1:5,7:12:6.15:179,6,0	1/1:11,6:17:15.87:181,16,0	0/1:32,15:46:12.16:344,0,12	0/0:22,0:22:45.06:0,45,434	0/0:19,0:19:51.08:0,51,492	0/0:25,0:25:63.09:0,63,608	0/0:26,0:26:69.11:0,69,666	1/1:14,7:21:8.83:208,9,0	1/1:9,9:18:12.33:224,12,0	1/1:7,3:10:11.63:175,12,0
chr10	99921058	.	C	CCCA	2111.18	PASS	AB=0.995;AC=11;AF=0.196;AN=56;BaseQRankSum=4.861;DP=640;FS=4.966;HRun=0;HaplotypeScore=140.1163;InbreedingCoeff=0.3872;MQ=71.15;MQ0=0;MQRankSum=-6.704;QD=13.71;ReadPosRankSum=-4.638;VQSLOD=2.4760;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:52.47:0,52,469	0/0:7,0:7:21.07:0,21,321	0/0:33,0:30:66.37:0,66,921	0/0:35,0:33:81.02:0,81,993	0/0:22,0:22:57.14:0,57,836	0/0:22,0:22:33.79:0,34,474	0/0:26,0:26:74.75:0,75,1120	0/1:19,0:19:26.51:120,0,27	1/1:6,16:23:39.13:844,39,0	0/0:21,0:21:60.14:0,60,922	0/0:21,0:21:53.74:0,54,816	0/0:30,0:30:67.16:0,67,1098	0/0:26,0:26:75.10:0,75,1088	0/0:38,0:38:99:0,108,1640	0/0:28,0:28:81.25:0,81,1228	0/0:25,0:25:72.20:0,72,1011	0/0:30,0:30:87.28:0,87,1355	1/1:2,17:19:45.15:954,45,0	0/1:10,0:10:35.71:36,0,41	0/0:14,0:14:9.84:0,10,52	0/1:38,0:38:71.28:71,0,199	0/0:19,0:19:48.10:0,48,731	0/0:19,0:19:51.16:0,51,777	0/0:24,0:24:69.13:0,69,1004	0/0:26,0:26:72.22:0,72,1083	0/1:15,0:15:26.04:26,0,50	0/1:19,0:19:71.08:96,0,71	1/1:10,0:10:4.54:125,5,0
chr10	99921360	.	T	TTATTTCGAC	18909.55	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-2.147;DP=603;FS=13.070;HRun=0;HaplotypeScore=157.5973;InbreedingCoeff=0.9949;MQ=86.88;MQ0=0;MQRankSum=-16.846;QD=106.23;ReadPosRankSum=-2.106;VQSLOD=4.6863;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.18:0,63,1742	0/0:11,0:11:30.10:0,30,908	0/0:27,0:27:66.20:0,66,1767	0/0:20,0:20:50.81:0,51,1259	0/0:19,0:19:48.15:0,48,1402	0/0:19,0:19:54.17:0,54,1587	0/0:20,0:20:57.16:0,57,1566	1/1:22,10:35:99:4251,99,0	1/1:8,13:23:60.09:2250,60,0	0/0:34,0:34:99:0,99,2860	0/0:31,0:31:90.30:0,90,2601	0/0:26,0:26:75.26:0,75,2297	0/0:17,0:17:51.17:0,51,1496	0/0:30,0:30:81.26:0,81,2327	0/0:17,0:17:51.18:0,51,1562	0/0:21,0:21:63.20:0,63,1863	0/0:22,0:22:63.20:0,63,1863	1/1:3,2:5:15.05:727,15,0	1/1:8,3:14:42.09:1422,42,0	1/1:10,14:25:63.05:2507,63,0	1/1:8,7:18:36.08:1441,36,0	0/0:24,0:24:72.23:0,72,1989	0/0:14,0:14:33.11:0,33,965	0/0:25,0:25:69.17:0,69,1908	0/0:27,0:27:72.25:0,72,2205	1/1:8,14:22:60.14:2691,60,0	1/1:10,15:29:72.01:2965,72,0	1/1:1,4:7:15.05:654,15,0
chr10	99922117	.	A	AT	890.15	PASS	AB=0.914;AC=6;AF=0.107;AN=56;BaseQRankSum=6.678;DP=563;FS=3.743;HRun=10;HaplotypeScore=62.6909;InbreedingCoeff=0.6063;MQ=75.99;MQ0=1;MQRankSum=-0.896;QD=11.27;ReadPosRankSum=0.442;VQSLOD=3.0506;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,108,886	0/0:4,0:4:11.99:0,12,98	0/0:23,0:23:21.76:0,22,258	0/0:14,0:13:14.13:0,14,180	0/0:21,0:21:56.91:0,57,468	0/0:23,0:23:62.92:0,63,517	0/0:20,1:22:20.94:0,21,365	0/0:40,0:40:86.88:0,87,714	1/1:2,16:19:20.30:405,20,0	0/0:13,0:13:26.90:0,27,220	0/1:16,2:18:13.05:13,0,318	0/0:17,0:17:41.90:0,42,341	0/0:20,0:20:25.90:0,26,369	0/1:11,1:13:3:3,0,174	0/0:19,0:20:49.96:0,50,400	0/0:20,0:20:59.92:0,60,490	0/0:29,0:29:65.86:0,66,538	1/1:5,23:29:38.35:597,38,0	0/0:24,0:24:59.91:0,60,490	0/0:13,0:13:35.96:0,36,295	0/0:15,1:17:5.98:0,6,245	0/0:10,0:10:23.96:0,24,197	0/0:19,0:19:56.94:0,57,468	0/0:24,0:24:37.18:0,37,420	0/0:13,1:14:6.96:0,7,261	0/0:23,0:23:59.92:0,60,493	0/0:24,0:24:56.89:0,57,465	0/0:9,0:9:14.95:0,15,121
chr10	99922575	.	GA	G	402.19	PASS	AB=0.844;AC=5;AF=0.089;AN=56;BaseQRankSum=6.091;DP=575;FS=0.000;HRun=9;HaplotypeScore=99.9682;InbreedingCoeff=0.3863;MQ=66.68;MQ0=3;MQRankSum=-5.316;QD=4.37;ReadPosRankSum=0.924;VQSLOD=0.5338;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:33:14.67:0,15,422	0/0:5,0:5:14.98:0,15,145	0/0:30,2:17:32.16:0,32,318	0/1:42,0:19:1.12:1,0,258	0/0:32,0:32:69.62:0,70,773	0/0:13,0:13:12:0,12,125	0/0:26,0:26:60.14:0,60,663	0/0:18,0:18:45.12:0,45,511	1/1:3,16:16:28.30:285,28,0	0/0:18,0:18:45.13:0,45,518	0/0:27,0:27:66.20:0,66,762	0/0:17,0:17:33.10:0,33,381	0/0:13,0:13:33.10:0,33,381	0/0:20,0:20:57.13:0,57,629	0/0:17,0:17:30.06:0,30,327	0/0:10,0:10:21.04:0,21,224	0/0:23,0:23:54.09:0,54,595	0/1:14,9:22:15.86:212,0,16	0/0:10,0:10:24.07:0,24,277	0/0:16,0:16:45.05:0,45,489	0/0:9,0:9:21.06:0,21,239	0/0:28,0:28:38.73:0,39,690	0/0:27,0:27:69.07:0,69,775	0/0:29,0:29:78.18:0,78,875	0/0:16,0:16:39.59:0,40,451	0/0:24,0:24:63.19:0,63,726	0/0:19,0:18:45.07:0,45,501	0/1:5,1:6:18.62:19,0,19
chr10	99922598	.	AG	A	588.68	PASS	AB=0.833;AC=4;AF=0.071;AN=56;BaseQRankSum=8.889;DP=585;FS=5.170;HRun=1;HaplotypeScore=115.4492;InbreedingCoeff=0.4155;MQ=65.85;MQ0=14;MQRankSum=-5.888;QD=14.02;ReadPosRankSum=0.299;VQSLOD=2.9656;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:20.70:0,21,326	0/0:7,0:7:18.04:0,18,251	0/0:55,0:18:40.39:0,40,511	0/0:51,0:22:34.88:0,35,648	0/0:29,0:27:71.72:0,72,1087	0/0:13,0:13:2.93:0,3,47	0/0:26,0:25:65.68:0,66,1027	0/0:15,0:15:31.09:0,31,380	1/1:3,15:17:45.39:458,45,0	0/0:20,0:20:57.02:0,57,865	0/0:27,0:27:81.28:0,81,1272	0/0:13,0:12:30.10:0,30,476	0/0:9,0:9:21.07:0,21,334	0/0:20,0:20:57.07:0,57,841	0/0:9,0:9:20.82:0,21,335	0/0:7,0:7:21.07:0,21,334	0/0:28,0:28:60.16:0,60,907	0/1:7,7:12:43.90:234,0,44	0/0:12,0:12:29.05:0,29,376	0/0:17,0:17:13.21:0,13,141	0/0:10,0:9:11.99:0,12,178	0/0:24,0:24:57.14:0,57,909	0/0:23,0:23:59.57:0,60,917	0/0:36,0:36:99:0,99,1567	0/0:16,0:16:45.13:0,45,719	0/0:26,0:26:69.99:0,70,922	0/0:18,0:16:36.09:0,36,468	0/1:10,0:8:7.42:7,0,49
chr10	99922601	.	GACACACACAC	G	4058.42	PASS	AB=0.803;AC=16;AF=0.296;AN=54;BaseQRankSum=9.247;DP=573;FS=28.550;HRun=0;HaplotypeScore=171.6892;InbreedingCoeff=0.6497;MQ=64.20;MQ0=13;MQRankSum=-4.415;QD=22.30;ReadPosRankSum=-1.835;VQSLOD=1.4771;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:31:21.07:0,21,756	0/0:6,0:6:15.05:0,15,627	0/0:52,0:17:27.51:0,28,758	0/1:46,0:20:1.41:1,0,1234	0/0:26,0:24:60.16:0,60,2071	./.	0/0:26,0:25:61.76:0,62,2539	1/1:4,10:14:18.06:530,18,0	1/1:17,0:17:35.98:402,36,0	0/0:19,0:19:54.19:0,54,2267	0/0:27,0:27:75.22:0,75,2880	0/0:13,0:12:27.09:0,27,1114	0/0:11,0:10:21.07:0,21,875	0/0:18,0:19:48.16:0,48,1942	0/0:10,0:10:18.02:0,18,668	0/0:8,0:8:18.06:0,18,809	0/0:29,0:29:54.14:0,54,1978	0/1:13,0:12:10.11:326,0,10	1/1:5,6:11:18.05:438,18,0	1/1:1,16:17:9.03:267,9,0	1/1:10,0:9:9.02:165,9,0	0/0:23,0:23:48.62:0,49,1848	0/0:24,0:24:54.16:0,54,2062	0/0:38,0:37:99:0,99,4086	0/0:16,0:16:42.14:0,42,1820	0/1:4,19:23:82.58:1222,0,83	0/1:12,4:16:11.12:490,0,11	1/1:3,6:8:9.03:218,9,0
chr10	99922602	.	AC	A	262.06	PASS	AB=0.588;AC=3;AF=0.054;AN=56;BaseQRankSum=8.744;DP=566;FS=14.205;HRun=1;HaplotypeScore=113.2358;InbreedingCoeff=0.4819;MQ=63.65;MQ0=13;MQRankSum=-4.250;QD=9.36;ReadPosRankSum=0.522;VQSLOD=0.1042;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:20.67:0,21,269	0/0:6,0:6:15.05:0,15,239	0/0:51,0:16:44.73:0,45,528	0/0:46,0:20:18.13:0,18,529	0/0:26,0:24:62.74:0,63,915	0/0:13,0:13:3.01:0,3,38	0/0:26,0:25:61.09:0,61,921	0/0:13,0:13:12.41:0,12,147	1/1:4,9:17:35.33:212,35,0	0/0:20,0:20:54.18:0,54,820	0/0:27,0:27:78.26:0,78,1174	0/0:14,0:13:30.10:0,30,450	0/0:10,0:9:21.07:0,21,310	0/0:19,0:19:52.05:0,52,758	0/0:9,0:9:17.64:0,18,277	0/0:8,0:8:21.05:0,21,295	0/0:30,0:30:57.17:0,57,813	0/1:3,6:8:7.56:155,0,8	0/0:11,0:11:11.74:0,12,182	0/0:17,0:17:6.28:0,6,46	0/0:10,0:9:5.61:0,6,75	0/0:22,0:22:51.17:0,51,778	0/0:24,0:24:60.20:0,60,872	0/0:38,0:37:99:0,102,1545	0/0:16,0:16:42.14:0,42,660	0/0:23,0:23:30.61:0,31,403	0/0:18,0:16:26.01:0,26,223	0/0:10,0:8:0.41:0,0,7
chr10	99922615	.	CAG	C	599.26	PASS	AB=0.902;AC=19;AF=0.413;AN=46;BaseQRankSum=-3.073;DP=591;FS=12.044;HRun=0;HaplotypeScore=127.5968;InbreedingCoeff=0.1051;MQ=57.32;MQ0=13;MQRankSum=3.046;QD=1.94;ReadPosRankSum=-0.557;VQSLOD=1.8374;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:6.03:0,6,58	./.	./.	./.	0/1:18,7:23:2.15:27,0,2	./.	0/1:32,0:30:34.40:105,0,34	0/0:18,0:18:5.78:0,6,32	0/0:21,0:20:1.41:0,1,36	1/1:18,6:24:12.81:117,13,0	1/1:27,0:27:4.99:89,5,0	0/1:14,1:15:15.09:38,0,15	0/1:14,0:13:1.95:68,0,2	0/1:14,2:16:0.76:36,0,1	1/1:13,0:13:6.77:86,7,0	1/1:5,5:10:2.68:32,3,0	0/1:16,17:33:70.30:79,0,70	0/0:16,0:14:10.96:0,11,89	0/0:10,0:10:5.93:0,6,39	0/0:19,0:19:0:0,0,0	./.	1/1:16,2:22:5.82:36,6,0	0/1:18,0:19:8.13:8,0,39	0/1:37,5:41:11.38:11,0,457	0/1:16,0:16:8.52:9,0,20	0/0:27,0:27:16.52:0,17,95	0/0:20,0:18:16.53:0,17,117	0/0:11,0:9:2.50:0,2,9
chr10	99922713	.	C	CA	1362.66	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.935;DP=591;FS=1.419;HRun=1;HaplotypeScore=85.4721;InbreedingCoeff=0.9995;MQ=84.24;MQ0=0;MQRankSum=-2.890;QD=37.85;ReadPosRankSum=1.947;VQSLOD=4.2717;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,108,1470	0/0:11,0:11:33.11:0,33,459	0/0:31,0:31:62.34:0,62,1106	0/0:19,0:17:39.08:0,39,507	0/0:20,0:20:57.19:0,57,792	0/0:24,0:24:72.07:0,72,975	0/0:28,0:28:84.21:0,84,1102	0/0:28,0:28:75.23:0,75,997	1/1:1,15:16:42.14:670,42,0	0/0:23,0:23:66.19:0,66,890	0/0:19,0:19:57.18:0,57,779	0/0:22,0:22:63.21:0,63,871	0/0:16,0:16:45.15:0,45,628	0/0:14,0:14:42.13:0,42,569	0/0:15,0:15:45.15:0,45,629	0/0:19,0:19:57.19:0,57,794	0/0:20,0:20:54.18:0,54,754	1/1:1,19:18:51.17:814,51,0	0/0:24,0:24:69.20:0,69,922	0/0:20,0:20:54.16:0,54,753	0/0:38,0:38:96.11:0,96,1307	0/0:16,0:16:45.14:0,45,628	0/0:16,0:16:42.14:0,42,579	0/0:23,0:23:66.13:0,66,872	0/0:17,0:17:51.17:0,51,711	0/0:22,0:22:60.20:0,60,835	0/0:19,0:19:48.14:0,48,635	0/0:10,0:10:30.10:0,30,419
chr10	99922964	.	T	TA	1406.10	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.792;DP=652;FS=0.000;HRun=1;HaplotypeScore=76.4538;InbreedingCoeff=0.9983;MQ=89.82;MQ0=0;MQRankSum=-0.068;QD=37.00;ReadPosRankSum=3.580;VQSLOD=4.1510;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,1761	0/0:9,0:9:27.09:0,27,348	0/0:28,0:28:75.17:0,75,913	0/0:22,0:22:63.12:0,63,752	0/0:31,0:31:93.26:0,93,1182	0/0:25,0:25:75.23:0,75,957	0/0:29,0:29:87.26:0,87,1100	0/0:27,0:27:81.23:0,81,1012	1/1:0,16:16:42.14:629,42,0	0/0:29,0:29:84.25:0,84,1063	0/0:33,0:32:93.30:0,93,1207	0/0:23,0:23:66.18:0,66,827	0/0:22,0:22:66.15:0,66,821	0/0:12,0:12:36.12:0,36,467	0/0:17,0:17:51.17:0,51,662	0/0:20,0:20:57.16:0,57,723	0/0:16,0:16:48.16:0,48,623	1/1:0,22:22:60.20:899,60,0	0/0:24,0:24:72.16:0,72,854	0/0:22,0:22:66.21:0,66,844	0/0:19,0:19:54.17:0,54,689	0/0:8,0:8:24.08:0,24,311	0/0:16,0:16:48.10:0,48,602	0/0:36,0:36:99:0,108,1355	0/0:21,0:21:57.19:0,57,740	0/0:34,0:34:99:0,102,1324	0/0:27,0:27:81.21:0,81,1017	0/0:17,0:17:51.14:0,51,641
chr10	99923090	.	ATT	A	1739.37	PASS	AB=0.637;AC=11;AF=0.196;AN=56;BaseQRankSum=3.551;DP=587;FS=4.064;HRun=16;HaplotypeScore=75.3995;InbreedingCoeff=0.4991;MQ=72.50;MQ0=1;MQRankSum=1.112;QD=8.53;ReadPosRankSum=3.072;VQSLOD=1.3896;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,1:28:19.27:0,19,205	0/0:5,0:6:14.39:0,14,148	0/0:20,0:16:19.87:0,20,192	0/0:10,0:6:5.75:0,6,47	0/0:25,0:29:80.52:0,81,882	1/1:10,14:24:30.71:334,31,0	0/0:16,0:18:50.43:0,50,569	0/1:17,10:28:1.77:159,0,2	0/0:5,0:20:10.84:0,11,98	0/0:23,0:23:51.63:0,52,512	0/0:17,0:19:42.25:0,42,405	0/0:18,0:17:43.86:0,44,477	0/0:13,0:14:37.27:0,37,416	0/0:10,0:12:32.24:0,32,305	0/0:19,0:20:39.11:0,39,485	0/0:12,0:12:33.05:0,33,385	0/0:31,0:35:84.20:0,84,1039	0/0:8,0:25:8.91:0,9,66	1/1:17,14:31:38.35:302,38,0	0/1:11,17:29:28.01:240,0,28	0/1:6,7:14:20.36:58,0,20	0/0:8,0:10:25.79:0,26,262	0/0:20,0:24:49.76:0,50,473	0/0:21,0:21:60.12:0,60,705	0/0:17,0:18:50.35:0,50,548	0/1:14,19:33:38.42:296,0,38	0/1:10,22:33:3.36:389,0,3	1/1:1,10:11:14.98:125,15,0
chr10	99923593	.	TCCC	T	6318.32	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=5.067;DP=465;FS=4.045;HRun=10;HaplotypeScore=77.8614;InbreedingCoeff=0.8895;MQ=74.21;MQ0=0;MQRankSum=-3.129;QD=25.07;ReadPosRankSum=5.926;VQSLOD=3.2317;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,39:43:99:1319,99,0	0/0:9,0:9:21.04:0,21,361	0/0:11,0:11:17.79:0,18,223	0/0:13,0:13:30.08:0,30,484	0/0:9,0:10:21.03:0,21,312	1/1:1,22:23:57.19:777,57,0	0/0:14,0:16:44.13:0,44,719	1/1:10,15:25:29.94:379,30,0	1/1:26,0:26:19.74:179,20,0	0/0:8,0:8:20.99:0,21,255	0/0:16,0:16:39.01:0,39,599	0/0:17,0:17:51.10:0,51,778	0/0:11,0:11:26.94:0,27,378	0/0:9,0:9:27.08:0,27,523	0/0:18,0:18:45.97:0,46,803	0/0:12,0:12:33.10:0,33,634	0/0:14,0:15:42.09:0,42,685	0/1:12,0:12:17.79:70,0,18	1/1:3,15:18:39.09:512,39,0	1/1:1,24:25:61.58:791,62,0	1/1:7,18:25:48.13:655,48,0	0/0:4,0:4:12.02:0,12,146	0/0:10,0:10:22.31:0,22,365	0/0:24,0:25:58.41:0,58,1042	0/0:9,0:9:23.97:0,24,363	1/1:6,17:23:51.16:695,51,0	1/1:3,24:27:66.21:899,66,0	1/1:4,1:5:2.99:41,3,0
chr10	99923599	.	CCCCCG	C	1167.72	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.030;DP=446;FS=0.000;HRun=0;HaplotypeScore=111.9917;InbreedingCoeff=0.8810;MQ=75.09;MQ0=0;MQRankSum=-4.504;QD=32.44;ReadPosRankSum=1.259;VQSLOD=3.5170;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:90.90:0,91,403	0/0:8,0:8:18.04:0,18,439	0/0:11,0:11:26.63:0,27,401	0/0:14,0:14:32.36:0,32,595	0/0:11,0:11:24.07:0,24,546	0/0:24,0:24:54.42:0,54,242	0/0:18,0:18:48.62:0,49,1028	0/0:20,0:20:33.85:0,34,190	1/1:1,23:24:47.71:884,48,0	0/0:9,0:9:18.01:0,18,294	0/0:15,0:15:35.90:0,36,816	0/0:17,0:17:42.13:0,42,880	0/0:11,0:11:29.94:0,30,486	0/0:9,0:9:27.08:0,27,736	0/0:16,0:16:45.98:0,46,1044	0/0:13,0:13:36.11:0,36,914	0/0:14,0:14:39.11:0,39,866	1/1:2,10:12:21.06:404,21,0	0/0:16,0:16:34.53:0,35,151	0/0:27,0:27:66.29:0,66,340	0/0:24,0:24:49.87:0,50,233	0/0:5,0:5:9.02:0,9,117	0/0:9,0:9:24.02:0,24,473	0/0:23,0:23:66.09:0,66,1435	0/0:13,0:13:26.97:0,27,447	0/0:17,0:17:46.53:0,47,201	0/0:25,0:25:62.67:0,63,294	0/0:2,0:2:2.74:0,3,12
chr10	99924234	.	AT	A	548.75	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.116;DP=504;FS=4.678;HRun=2;HaplotypeScore=72.0640;InbreedingCoeff=0.9040;MQ=77.11;MQ0=0;MQRankSum=-3.287;QD=19.60;ReadPosRankSum=-0.045;VQSLOD=3.5190;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:57.61:0,58,562	0/0:4,0:4:12.03:0,12,160	0/0:22,1:20:10.94:0,11,269	0/0:15,0:13:14.57:0,15,147	0/0:34,0:34:97:0,97,1290	0/0:13,0:13:36.06:0,36,359	0/0:10,0:10:26.92:0,27,345	0/0:22,0:22:63.05:0,63,647	1/1:1,6:7:20.86:156,21,0	0/0:26,0:26:72.17:0,72,908	0/0:23,0:23:66.99:0,67,894	0/0:19,0:19:52.97:0,53,720	0/0:11,0:11:30.08:0,30,405	0/0:17,0:17:48.12:0,48,658	0/0:26,0:26:78.21:0,78,1062	0/0:15,0:15:37.87:0,38,428	0/0:22,0:22:63.09:0,63,788	1/1:7,14:21:62.48:513,62,0	0/0:17,0:17:48.08:0,48,486	0/0:26,0:26:69.05:0,69,729	0/0:8,0:8:21.02:0,21,222	0/0:16,0:16:45.07:0,45,582	0/0:19,0:19:50.81:0,51,612	0/0:24,0:24:66.17:0,66,896	0/0:16,0:16:45.13:0,45,630	0/0:19,0:19:56.30:0,56,543	0/0:22,0:22:60.07:0,60,647	0/0:3,0:3:6.01:0,6,61
chr10	99924236	.	T	TA	2226.42	PASS	AB=0.789;AC=17;AF=0.304;AN=56;BaseQRankSum=-4.063;DP=543;FS=6.788;HRun=12;HaplotypeScore=74.2320;InbreedingCoeff=0.7032;MQ=73.71;MQ0=1;MQRankSum=0.900;QD=11.60;ReadPosRankSum=-2.020;VQSLOD=2.7355;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,2:32:45.71:241,46,0	0/0:5,0:5:8.91:0,9,66	0/0:23,1:19:11.99:0,12,140	0/0:13,0:12:11.70:0,12,78	0/0:34,2:37:32.08:0,32,542	1/1:4,10:16:29.72:262,30,0	0/0:11,0:11:17.84:0,18,131	1/1:9,14:25:8.42:343,8,0	0/0:8,0:8:7.13:0,7,18	0/0:25,1:26:21.48:0,21,319	0/0:25,0:26:61.63:0,62,442	0/0:16,0:18:46.76:0,47,334	0/0:11,0:11:23.80:0,24,172	0/0:17,0:18:43.69:0,44,307	0/0:27,0:27:62.61:0,63,460	0/1:11,1:14:3.28:3,0,131	0/0:23,0:23:45.59:0,46,328	0/0:22,0:22:18.88:0,19,48	1/1:6,8:16:29.70:256,30,0	1/1:4,22:29:17.99:577,18,0	0/1:6,3:9:31.71:46,0,32	0/0:17,0:17:35.67:0,36,257	0/0:21,1:23:14.87:0,15,239	0/0:23,0:23:56.64:0,57,413	0/0:17,0:17:38.73:0,39,284	1/1:3,17:20:29.62:413,30,0	0/1:15,11:28:51.70:219,0,52	1/1:1,2:3:6.01:58,6,0
chr10	99924248	.	ACC	A	896.56	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.164;DP=547;FS=0.000;HRun=2;HaplotypeScore=83.4379;InbreedingCoeff=0.9655;MQ=77.55;MQ0=1;MQRankSum=-4.048;QD=30.92;ReadPosRankSum=-1.617;VQSLOD=2.9502;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:16.22:0,16,466	0/0:4,0:4:12.04:0,12,187	0/0:28,0:21:31.24:0,31,603	0/0:22,0:19:42.03:0,42,559	0/0:39,0:39:99:0,117,1711	0/0:15,0:15:35.17:0,35,361	0/0:13,0:13:36.03:0,36,555	0/0:27,0:27:70.61:0,71,834	1/1:2,8:10:27.08:322,27,0	0/0:23,0:23:69.23:0,69,1051	0/0:27,0:27:81.27:0,81,1236	0/0:18,0:18:54.18:0,54,826	0/0:12,0:12:36.10:0,36,527	0/0:18,0:18:49.54:0,50,724	0/0:22,0:22:66.22:0,66,1023	0/0:13,0:13:36.11:0,36,523	0/0:19,0:19:57.19:0,57,865	1/1:3,16:19:57.17:696,57,0	0/0:17,0:17:45.06:0,45,502	0/0:34,0:34:74.72:0,75,949	0/0:6,0:6:15.03:0,15,195	0/0:16,0:16:48.16:0,48,739	0/0:22,0:22:64.74:0,65,919	0/0:19,0:19:57.19:0,57,885	0/0:18,0:18:54.18:0,54,837	0/0:24,0:24:68.75:0,69,728	0/0:24,0:24:63.10:0,63,750	0/0:7,0:7:18.04:0,18,231
chr10	99924334	.	CAT	C	808	PASS	AB=0.929;AC=5;AF=0.093;AN=54;BaseQRankSum=8.299;DP=531;FS=5.067;HRun=0;HaplotypeScore=62.5513;InbreedingCoeff=0.7602;MQ=67.75;MQ0=0;MQRankSum=-0.530;QD=17.96;ReadPosRankSum=0.847;VQSLOD=3.0624;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:19:42.12:0,42,680	0/0:14,0:14:39.13:0,39,658	0/0:6,0:6:2.99:0,3,50	./.	0/0:44,1:45:81.79:0,82,1886	0/0:12,0:11:30.10:0,30,493	0/1:12,1:13:2.49:2,0,504	0/0:37,0:37:87.28:0,87,1421	1/1:2,10:12:21.07:270,21,0	0/0:34,0:34:96.33:0,96,1587	0/0:28,0:28:75.25:0,75,1241	0/0:11,0:11:33.11:0,33,551	0/0:13,0:13:30.10:0,30,506	0/0:15,0:15:42.14:0,42,709	0/0:14,0:14:42.14:0,42,709	0/0:14,0:14:33.11:0,33,554	0/0:20,0:20:48.16:0,48,809	1/1:2,18:20:51.17:656,51,0	0/0:19,0:19:36.10:0,36,580	0/0:37,0:37:96.33:0,96,1612	0/0:3,0:3:9.03:0,9,152	0/0:14,0:14:30.09:0,30,481	0/0:29,0:29:72.23:0,72,1183	0/0:7,0:7:21.07:0,21,354	0/0:28,0:28:78.27:0,78,1316	0/0:23,0:23:54.18:0,54,909	0/0:23,0:23:60.21:0,60,1012	0/0:16,0:16:45.15:0,45,759
chr10	99925197	.	T	TGA	1275.28	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.756;DP=725;FS=0.000;HRun=0;HaplotypeScore=90.0676;InbreedingCoeff=0.9994;MQ=80.47;MQ0=0;MQRankSum=-4.051;QD=41.14;ReadPosRankSum=0.235;VQSLOD=5.3593;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:99:0,114,1594	0/0:16,0:16:45.15:0,45,630	0/0:21,0:21:51.17:0,51,694	0/0:25,0:25:58.71:0,59,739	0/0:25,0:25:75.25:0,75,1047	0/0:38,0:36:99:0,105,1435	0/0:26,0:26:66.22:0,66,924	0/0:33,0:33:87.28:0,87,1204	1/1:2,15:17:39.13:699,39,0	0/0:31,0:31:61.31:0,61,1160	0/0:19,0:19:54.17:0,54,739	0/0:25,0:25:72.23:0,72,991	0/0:29,0:29:87.23:0,87,1179	0/0:19,0:19:48.60:0,49,653	0/0:26,0:26:75.25:0,75,1050	0/0:19,0:19:57.17:0,57,779	0/0:39,0:39:99:0,105,1429	1/1:1,13:14:39.13:698,39,0	0/0:28,0:28:66.20:0,66,905	0/0:26,0:26:66.22:0,66,923	0/0:38,0:38:99:0,108,1494	0/0:29,0:29:81.25:0,81,1115	0/0:22,0:22:66.21:0,66,906	0/0:42,0:42:99:0,120,1645	0/0:22,0:22:66.21:0,66,908	0/0:26,0:26:72.13:0,72,983	0/0:17,0:17:48.15:0,48,655	0/0:9,0:9:27.09:0,27,378
chr10	99925730	.	T	TA	1181.54	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.358;DP=616;FS=0.698;HRun=1;HaplotypeScore=69.0050;InbreedingCoeff=0.9987;MQ=84.51;MQ0=0;MQRankSum=-2.687;QD=34.75;ReadPosRankSum=3.176;VQSLOD=3.8139;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.29:0,90,1168	0/0:9,0:9:27.09:0,27,350	0/0:28,0:28:84.25:0,84,1068	0/0:10,0:10:30.07:0,30,367	0/0:23,0:23:69.18:0,69,863	0/0:17,0:17:51.17:0,51,662	0/0:12,0:12:30.08:0,30,376	0/0:32,0:32:90.26:0,90,1139	1/1:1,20:21:54.18:809,54,0	0/0:21,0:21:60.19:0,60,767	0/0:17,0:17:48.15:0,48,611	0/0:19,0:19:57.17:0,57,726	0/0:16,0:16:48.16:0,48,623	0/0:18,0:18:51.17:0,51,662	0/0:41,0:41:99:0,123,1582	0/0:18,0:18:54.16:0,54,687	0/0:21,0:21:63.20:0,63,817	1/1:1,12:13:33.11:494,33,0	0/0:18,0:18:54.17:0,54,690	0/0:26,0:26:72.19:0,72,890	0/0:29,0:29:87.26:0,87,1113	0/0:28,0:28:84.26:0,84,1075	0/0:27,0:27:78.25:0,78,1001	0/0:21,0:21:60.19:0,60,767	0/0:19,0:19:57.19:0,57,740	0/0:33,0:33:93.30:0,93,1205	0/0:36,0:36:99:0,99,1257	0/0:12,0:12:36.12:0,36,467
chr10	99925945	.	CTGTT	C	5761.10	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=4.965;DP=508;FS=21.313;HRun=0;HaplotypeScore=89.7978;InbreedingCoeff=0.9677;MQ=68.46;MQ0=2;MQRankSum=-3.004;QD=36.23;ReadPosRankSum=-0.325;VQSLOD=3.1585;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:65.20:0,65,1379	0/0:8,0:8:24.06:0,24,489	0/0:20,0:12:27.01:0,27,428	0/0:19,0:11:25.55:0,26,252	0/0:31,0:31:90.09:0,90,1796	1/1:0,12:12:24.08:469,24,0	0/0:13,0:13:39.09:0,39,737	1/1:1,29:30:86.97:1114,87,0	0/0:4,0:4:9.01:0,9,163	0/0:23,0:23:69.16:0,69,1249	0/0:22,0:22:63.19:0,63,1368	0/0:12,0:12:33.09:0,33,598	0/0:15,0:15:42.06:0,42,721	0/0:11,0:11:33.10:0,33,683	0/0:16,0:16:48.10:0,48,968	0/0:18,0:18:51.16:0,51,1148	0/0:21,0:21:60.14:0,60,1258	0/0:18,0:18:33.10:0,33,642	1/1:15,6:21:54.66:706,55,0	1/1:1,14:17:41.99:640,42,0	1/1:1,12:14:5.03:101,5,0	0/0:16,0:16:43.92:0,44,860	0/0:27,0:27:78.19:0,78,1604	0/0:12,0:12:33.05:0,33,607	0/0:20,0:20:60.11:0,60,1109	1/1:3,21:26:78.16:1196,78,0	1/1:3,23:27:57.19:1041,57,0	1/1:0,11:12:27.08:495,27,0
chr10	99925946	.	TG	T	2941.99	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.872;DP=519;FS=37.137;HRun=1;HaplotypeScore=74.3917;InbreedingCoeff=0.9710;MQ=67.33;MQ0=2;MQRankSum=-2.148;QD=18.86;ReadPosRankSum=-0.525;VQSLOD=1.7287;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:62.49:0,62,607	0/0:8,0:8:22.26:0,22,214	0/0:20,0:11:26.16:0,26,224	0/0:20,0:12:26.36:0,26,202	0/0:32,0:32:82:0,82,854	1/1:12,0:12:24.01:211,24,0	0/0:14,0:14:32.82:0,33,370	1/1:29,0:29:86.73:697,87,0	0/0:4,0:4:8.99:0,9,80	0/0:23,1:24:31.99:0,32,514	0/0:24,0:24:43.03:0,43,629	0/0:13,0:13:27.60:0,28,285	0/0:14,0:14:41.95:0,42,395	0/0:11,0:11:32.25:0,32,303	0/0:18,0:18:42.98:0,43,475	0/0:19,0:19:46.20:0,46,487	0/0:22,0:22:45.42:0,45,561	0/0:21,0:21:32.81:0,33,251	1/1:20,1:21:59.39:481,59,0	1/1:16,0:16:41.88:340,42,0	1/1:13,1:14:6.47:55,6,0	0/0:15,0:15:18.91:0,19,360	0/0:27,0:27:70.51:0,71,683	0/0:13,0:13:29.80:0,30,273	0/0:21,0:21:58.63:0,59,570	1/1:24,2:26:77.92:656,78,0	1/1:24,2:26:56.82:467,57,0	1/1:12,0:12:27.01:239,27,0
chr10	99926455	.	C	CA	1267.32	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=7.943;DP=504;FS=0.583;HRun=0;HaplotypeScore=77.1820;InbreedingCoeff=0.4030;MQ=82.27;MQ0=0;MQRankSum=-3.972;QD=9.46;ReadPosRankSum=2.217;VQSLOD=3.6124;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:6.69:7,0,21	0/0:8,0:8:24.08:0,24,336	0/0:19,0:19:57.19:0,57,782	0/0:14,0:14:39.60:0,40,540	0/0:17,0:17:51.14:0,51,693	0/0:23,0:23:1.30:0,1,52	0/0:17,0:17:51.15:0,51,695	0/0:18,0:18:24.27:0,24,94	1/1:0,13:13:36.12:506,36,0	0/0:23,0:23:69.22:0,69,946	0/0:9,0:9:27.08:0,27,361	0/0:19,0:19:54.18:0,54,754	0/0:14,0:14:42.13:0,42,571	0/0:17,0:17:51.15:0,51,680	0/0:12,0:12:36.10:0,36,484	0/0:15,0:15:45.14:0,45,612	0/0:40,0:40:99:0,120,1640	1/1:0,21:21:60.20:863,60,0	0/1:26,0:26:8.84:9,0,63	0/1:20,0:20:15.46:15,0,33	0/0:28,0:28:10.98:0,11,26	0/0:13,0:13:36.12:0,36,503	0/0:11,0:11:27.08:0,27,361	0/0:22,0:22:63.20:0,63,864	0/0:17,0:17:51.16:0,51,698	0/0:14,0:14:1.58:0,2,46	0/1:23,0:23:3.41:3,0,22	0/1:3,0:3:0.06:0,0,0
chr10	99926456	.	C	CG	8774.16	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-8.516;DP=512;FS=1.103;HRun=1;HaplotypeScore=53.5963;InbreedingCoeff=0.9910;MQ=82.12;MQ0=0;MQRankSum=-2.387;QD=39.35;ReadPosRankSum=-0.174;VQSLOD=5.0962;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:81.10:1181,81,0	0/0:8,0:8:24.08:0,24,311	0/0:20,0:20:57.17:0,57,702	0/0:14,0:14:36.59:0,37,467	0/0:17,0:17:51.11:0,51,641	1/1:1,23:24:63.21:942,63,0	0/0:17,0:17:51.13:0,51,643	1/1:0,18:18:54.10:761,54,0	1/1:14,0:14:36.12:522,36,0	0/0:24,0:24:66.15:0,66,822	0/0:10,0:10:27.08:0,27,338	0/0:20,0:20:57.17:0,57,724	0/0:13,0:13:39.13:0,39,505	0/0:16,0:16:48.15:0,48,608	0/0:11,0:11:33.09:0,33,413	0/0:15,0:15:45.14:0,45,570	0/0:40,0:40:99:0,120,1495	1/1:21,0:21:60.20:864,60,0	1/1:1,27:28:81.02:1106,81,0	1/1:0,20:21:59.90:807,60,0	1/1:0,28:28:72.24:1076,72,0	0/0:14,0:14:36.12:0,36,466	0/0:11,0:11:30.08:0,30,360	0/0:21,0:21:63.19:0,63,803	0/0:18,0:18:51.16:0,51,649	1/1:0,15:15:45.01:573,45,0	1/1:0,23:23:54.18:807,54,0	1/1:0,3:3:9.03:135,9,0
chr10	99927103	.	G	GGAT	718.75	PASS	AB=0.875;AC=3;AF=0.054;AN=56;BaseQRankSum=7.107;DP=729;FS=12.825;HRun=0;HaplotypeScore=147.1797;InbreedingCoeff=0.6471;MQ=65.61;MQ0=1;MQRankSum=-6.920;QD=23.19;ReadPosRankSum=1.722;VQSLOD=3.3386;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,111,1722	0/0:15,0:15:39.13:0,39,633	0/0:23,0:20:54.48:0,54,897	0/0:26,0:25:59.92:0,60,834	0/0:28,0:28:75.24:0,75,1189	0/0:17,0:16:42.14:0,42,672	0/0:34,0:34:81.25:0,81,1276	0/0:28,0:28:75.25:0,75,1195	1/1:12,12:24:35.51:649,36,0	0/0:33,0:33:87.30:0,87,1408	0/0:16,0:16:42.12:0,42,663	0/0:33,0:33:93.32:0,93,1509	0/0:39,0:39:99:0,111,1782	0/0:39,0:39:99:0,108,1760	0/0:36,0:36:99:0,99,1609	0/0:32,0:32:81.27:0,81,1295	0/0:33,0:33:83.66:0,84,1289	0/1:6,1:7:24.61:176,0,25	0/0:14,0:14:36.12:0,36,578	0/0:19,0:19:33.11:0,33,533	0/0:45,0:45:54.68:0,55,973	0/0:22,0:22:60.20:0,60,972	0/0:27,0:27:75.24:0,75,1185	0/0:30,0:30:78.27:0,78,1259	0/0:18,0:18:51.17:0,51,819	0/0:24,0:24:66.22:0,66,1078	0/0:16,0:16:38.13:0,38,522	0/0:7,0:7:21.07:0,21,369
chr10	99927120	.	GTGGTGATGA	G	4244.44	PASS	AB=0.824;AC=17;AF=0.304;AN=56;BaseQRankSum=8.330;DP=706;FS=8.689;HRun=0;HaplotypeScore=211.9478;InbreedingCoeff=0.7519;MQ=60.75;MQ0=17;MQRankSum=-7.694;QD=21.99;ReadPosRankSum=-1.435;VQSLOD=2.6750;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:96.31:0,96,3368	0/0:12,0:12:30.03:0,30,1193	0/0:35,0:22:36.31:0,36,718	0/0:38,0:27:52.42:0,52,906	0/0:23,0:22:51.03:0,51,1606	1/1:13,4:15:23.80:443,24,0	0/0:34,0:34:78.19:0,78,2350	0/1:23,0:22:6.85:588,0,7	0/1:15,0:22:44.41:44,0,144	0/0:25,0:23:48.15:0,48,1373	0/0:16,0:16:41.87:0,42,1211	0/0:32,0:32:93.28:0,93,2971	0/0:35,0:35:99:0,102,3435	0/0:31,0:31:78.26:0,78,2767	0/0:38,0:38:99:0,99,3746	0/0:31,0:31:90.28:0,90,3262	0/0:32,0:32:27.37:0,27,2593	0/1:3,0:5:38.25:38,0,41	1/1:7,2:8:14.97:246,15,0	1/1:13,6:19:27.03:478,27,0	1/1:41,6:47:12.03:354,12,0	0/0:18,0:18:32.92:0,33,1062	0/0:19,0:19:48.14:0,48,1722	0/0:33,0:32:87.28:0,87,3316	0/0:20,0:18:36.11:0,36,1219	1/1:22,4:25:53.90:942,54,0	1/1:11,8:19:38.34:795,38,0	1/1:5,1:6:18.06:316,18,0
chr10	99927135	.	A	ATGG	2407.36	PASS	AB=0.905;AC=13;AF=0.232;AN=56;BaseQRankSum=11.691;DP=739;FS=23.099;HRun=0;HaplotypeScore=152.9598;InbreedingCoeff=0.2599;MQ=53.47;MQ0=40;MQRankSum=-7.277;QD=10.84;ReadPosRankSum=-3.665;VQSLOD=1.2331;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:38:99:0,108,1649	0/0:11,0:11:33.11:0,33,559	0/0:32,0:16:28.32:0,28,416	0/0:43,0:21:37.29:0,37,599	0/0:23,0:21:51.07:0,51,793	0/1:18,0:16:46.77:96,0,47	0/0:28,0:28:75.15:0,75,1185	0/1:27,4:30:99:417,0,106	1/1:20,0:20:38.76:505,39,0	0/0:21,0:18:48.15:0,48,757	0/0:18,0:17:44.74:0,45,662	0/0:33,0:33:99:0,99,1554	0/0:40,0:40:99:0,120,1787	0/0:33,0:33:99:0,99,1563	0/0:40,0:40:99:0,111,1807	0/0:32,0:30:90.26:0,90,1447	0/0:32,0:32:74.86:0,75,1181	1/1:7,0:7:10.13:150,10,0	0/1:17,0:10:25.33:76,0,25	1/1:17,2:18:6.29:137,6,0	0/1:49,6:53:72.89:191,0,73	0/0:20,0:17:39.08:0,39,610	0/0:20,0:19:54.16:0,54,860	0/0:32,0:31:93.29:0,93,1513	0/0:18,0:16:48.14:0,48,759	0/1:20,5:22:53.35:552,0,53	0/1:20,0:20:84.99:197,0,85	0/1:6,4:10:67.53:252,0,68
chr10	99927147	.	GTGA	G	3452.14	PASS	AB=0.656;AC=16;AF=0.286;AN=56;BaseQRankSum=13.101;DP=748;FS=8.413;HRun=0;HaplotypeScore=141.7069;InbreedingCoeff=0.7963;MQ=50.92;MQ0=49;MQRankSum=-8.035;QD=15.62;ReadPosRankSum=-4.052;VQSLOD=1.9417;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:39:99:0,99,1906	0/0:12,0:12:33.11:0,33,629	0/0:33,0:14:18.06:0,18,316	0/0:47,0:16:20.25:0,20,429	0/0:23,0:21:48.15:0,48,911	1/1:4,14:16:21.02:260,21,0	0/0:30,0:30:72.25:0,72,1374	0/1:11,18:27:99:587,0,129	1/1:21,0:21:14.28:132,14,0	0/0:21,0:19:31.59:0,32,895	0/0:16,0:15:29.76:0,30,524	0/0:31,0:31:75.26:0,75,1496	0/0:37,0:37:99:0,105,2070	0/0:34,0:34:90.10:0,90,1755	0/0:45,0:45:99:0,117,2190	0/0:31,0:29:75.26:0,75,1525	0/0:29,0:29:76.50:0,77,1503	0/0:8,0:8:4.66:0,5,17	1/1:10,7:9:24.03:294,24,0	1/1:7,13:17:20.85:213,21,0	1/1:40,16:54:44.56:570,45,0	0/0:20,0:17:42.03:0,42,817	0/0:17,0:16:45.14:0,45,906	0/0:31,0:30:87.29:0,87,1704	0/0:20,0:18:45.14:0,45,860	0/1:14,11:19:17.78:443,0,18	1/1:10,12:22:56.94:743,57,0	1/1:7,5:10:15.05:209,15,0
chr10	99927320	.	A	ATATT	17150.02	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-9.333;DP=769;FS=9.051;HRun=0;HaplotypeScore=117.1529;InbreedingCoeff=0.9827;MQ=77.21;MQ0=1;MQRankSum=-6.285;QD=56.79;ReadPosRankSum=-1.408;VQSLOD=6.0343;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,37:45:87.21:2144,87,0	0/0:12,0:12:36.12:0,36,647	0/0:21,0:21:29.25:0,29,713	0/0:25,0:25:40.95:0,41,889	0/0:30,0:30:83.94:0,84,1481	1/1:3,29:32:81.16:1892,81,0	0/0:19,0:19:57.18:0,57,989	1/1:11,27:37:87.28:2112,87,0	1/1:2,20:22:57.11:1363,57,0	0/0:35,0:35:96.30:0,96,1644	0/0:26,0:26:75.24:0,75,1318	0/0:35,0:35:99:0,99,1763	0/0:42,0:42:99:0,120,2144	0/0:20,0:20:54.17:0,54,941	0/0:37,0:37:99:0,102,1764	0/0:36,1:37:15.33:0,15,1505	0/0:26,0:26:69.19:0,69,1151	1/1:2,12:16:33.11:825,33,0	1/1:4,17:21:54.13:1291,54,0	1/1:8,22:31:75.13:1679,75,0	1/1:2,22:24:57.15:1423,57,0	0/0:19,0:19:48.15:0,48,830	0/0:27,0:27:63.22:0,63,1132	0/0:24,0:24:66.23:0,66,1176	0/0:32,0:32:90.28:0,90,1586	1/1:6,31:38:99:2453,99,0	1/1:1,28:29:72.20:1811,72,0	1/1:0,3:3:6.02:156,6,0
chr10	99927626	.	C	CTTAGGA	3172.73	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.579;DP=718;FS=7.650;HRun=0;HaplotypeScore=165.3033;InbreedingCoeff=0.9484;MQ=84.69;MQ0=0;MQRankSum=-10.548;QD=73.78;ReadPosRankSum=1.583;VQSLOD=4.4891;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,3503	0/0:21,0:21:63.20:0,63,1501	0/0:17,0:17:48.16:0,48,1141	0/0:29,0:29:78.88:0,79,1653	0/0:28,0:28:84.29:0,84,2039	0/0:23,0:23:66.23:0,66,1597	0/0:33,0:33:93.32:0,93,2270	0/0:40,0:40:99:0,117,2676	1/1:12,17:29:79.60:2268,80,0	0/0:43,0:43:99:0,129,3048	0/0:25,0:25:72.25:0,72,1764	0/0:21,0:21:60.21:0,60,1473	0/0:28,0:28:81.28:0,81,1986	0/0:21,0:21:63.22:0,63,1552	0/0:29,0:29:87.30:0,87,2103	0/0:18,0:18:54.19:0,54,1326	0/0:23,0:23:69.24:0,69,1677	1/1:4,10:14:33.11:1026,33,0	0/0:14,0:14:39.13:0,39,951	0/0:29,0:29:87.28:0,87,2044	0/0:33,0:33:96.26:0,96,2260	0/0:19,0:19:57.18:0,57,1352	0/0:35,0:35:99:0,99,2382	0/0:24,0:24:72.25:0,72,1738	0/0:18,0:18:51.17:0,51,1223	0/0:20,0:20:60.21:0,60,1475	0/0:32,0:32:96.33:0,96,2315	0/0:2,0:2:6.02:0,6,148
chr10	99927628	.	ACC	A	677.73	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.709;DP=718;FS=0.000;HRun=2;HaplotypeScore=107.9095;InbreedingCoeff=0.9706;MQ=84.91;MQ0=0;MQRankSum=-9.658;QD=19.93;ReadPosRankSum=3.201;VQSLOD=1.6095;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,151,2992	0/0:21,0:21:63.22:0,63,1278	0/0:18,0:18:54.19:0,54,1062	0/0:28,0:28:77.07:0,77,1396	0/0:28,0:28:84.29:0,84,1695	0/0:23,0:23:69.24:0,69,1397	0/0:35,0:35:99:0,105,2099	0/0:39,0:39:99:0,117,2362	1/1:17,6:23:63.29:561,63,0	0/0:45,0:45:99:0,135,2641	0/0:24,0:24:72.25:0,72,1462	0/0:21,0:21:63.22:0,63,1280	0/0:29,0:29:87.30:0,87,1736	0/0:21,0:21:63.22:0,63,1280	0/0:30,0:30:87.28:0,87,1729	0/0:18,0:18:54.19:0,54,1097	0/0:25,0:25:75.26:0,75,1510	1/1:10,1:11:31.87:239,32,0	0/0:16,0:16:48.16:0,48,960	0/0:29,0:29:87.22:0,87,1652	0/0:33,0:33:93.32:0,93,1888	0/0:20,0:20:60.21:0,60,1192	0/0:33,0:33:99:0,99,1997	0/0:25,0:25:75.22:0,75,1479	0/0:18,0:18:54.19:0,54,1073	0/0:20,0:20:60.21:0,60,1218	0/0:32,0:32:96.33:0,96,1948	0/0:3,0:3:9.03:0,9,178
chr10	99927629	.	C	CAATT	1944.98	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.838;DP=721;FS=0.000;HRun=0;HaplotypeScore=134.0381;InbreedingCoeff=0.9707;MQ=84.32;MQ0=0;MQRankSum=-9.724;QD=57.21;ReadPosRankSum=2.764;VQSLOD=5.2529;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,150,3002	0/0:21,0:21:63.22:0,63,1302	0/0:18,0:18:54.16:0,54,1053	0/0:27,0:27:74.68:0,75,1345	0/0:28,0:28:84.29:0,84,1761	0/0:23,0:23:69.24:0,69,1434	0/0:35,0:35:99:0,105,2120	0/0:39,0:39:99:0,117,2393	1/1:6,17:23:65.41:1305,65,0	0/0:43,0:43:99:0,129,2580	0/0:26,0:26:72.25:0,72,1510	0/0:21,0:21:63.22:0,63,1312	0/0:29,0:29:87.28:0,87,1737	0/0:21,0:21:63.22:0,63,1321	0/0:31,0:31:84.29:0,84,1741	0/0:18,0:18:54.19:0,54,1128	0/0:25,0:25:75.24:0,75,1500	1/1:1,10:11:33.09:761,33,0	0/0:17,0:17:48.15:0,48,951	0/0:27,0:27:78.27:0,78,1635	0/0:34,0:34:93.32:0,93,1950	0/0:20,0:20:60.18:0,60,1178	0/0:34,0:34:99:0,99,2003	0/0:26,0:26:72.25:0,72,1497	0/0:18,0:18:54.17:0,54,1055	0/0:20,0:20:60.21:0,60,1258	0/0:32,0:32:96.33:0,96,1991	0/0:3,0:3:9.03:0,9,173
chr10	99928207	.	AG	A	220.07	PASS	AB=1.000;AC=23;AF=0.885;AN=26;BaseQRankSum=-1.803;DP=74;FS=15.337;HRun=5;HaplotypeScore=36.5162;InbreedingCoeff=0.2352;MQ=124.06;MQ0=1;MQRankSum=-2.969;QD=4.89;ReadPosRankSum=0.965;VQSLOD=-0.6807;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:5.76:33,6,0	1/1:1,0:1:2.98:21,3,0	0/1:23,0:13:2.49:2,0,154	0/0:23,0:9:14.88:0,15,175	1/1:3,0:3:5.93:40,6,0	1/1:1,0:1:2.98:21,3,0	./.	./.	./.	./.	./.	1/1:4,0:4:5.54:40,6,0	./.	./.	1/1:1,0:1:2.97:20,3,0	1/1:1,0:1:2.97:20,3,0	./.	./.	./.	1/1:1,0:1:2.97:20,3,0	./.	./.	./.	1/1:1,0:1:2.97:20,3,0	1/1:2,0:2:5.93:40,6,0	1/1:2,0:2:5.94:41,6,0	./.	./.
chr10	99929185	.	CATCTGTAATGGG	C	1335.57	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.534;DP=587;FS=7.570;HRun=0;HaplotypeScore=172.4694;InbreedingCoeff=0.8668;MQ=51.64;MQ0=51;MQRankSum=-6.344;QD=58.07;ReadPosRankSum=0.710;VQSLOD=3.0347;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:72.25:0,72,3924	0/0:5,0:5:15.04:0,15,659	0/0:25,0:4:12.04:0,12,414	0/0:40,0:2:6.02:0,6,368	0/0:25,0:25:63.04:0,63,3696	1/1:4,19:23:42.14:1430,42,0	0/0:26,0:26:75.26:0,75,4360	0/0:23,0:21:60.21:0,60,3311	0/0:18,0:16:45.15:0,45,2592	0/0:18,0:18:51.17:0,51,2940	0/0:17,0:17:48.05:0,48,2412	0/0:11,0:11:30.09:0,30,1536	0/0:17,0:17:48.16:0,48,2458	0/0:17,0:17:48.15:0,48,2527	0/0:26,0:25:75.23:0,75,4186	0/0:17,0:17:51.18:0,51,2978	0/0:25,0:24:75.26:0,75,4223	0/0:25,0:23:54.14:0,54,3164	0/0:28,0:24:63.21:0,63,3323	0/0:17,0:16:48.16:0,48,2822	0/0:32,0:32:93.32:0,93,5364	0/0:19,0:18:51.18:0,51,2907	0/0:19,0:19:47.68:0,48,2517	0/0:23,0:23:63.22:0,63,3537	0/0:11,0:11:33.11:0,33,1932	0/0:25,0:25:75.26:0,75,4544	0/0:20,0:19:56.93:0,57,3436	0/0:9,0:9:27.09:0,27,1580
chr10	99929347	.	TGTGA	T	1180.68	PASS	AB=0.990;AC=28;AF=0.500;AN=56;BaseQRankSum=3.781;DP=473;FS=11.011;HRun=0;HaplotypeScore=87.9429;InbreedingCoeff=-0.0734;MQ=46.39;MQ0=37;MQRankSum=1.630;QD=2.91;ReadPosRankSum=-1.603;VQSLOD=0.0251;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:27:83.08:83,0,170	0/1:3,0:3:14.66:15,0,18	0/0:1,0:1:2.92:0,3,17	0/0:1,0:1:2.90:0,3,16	0/1:21,4:25:0.77:1,0,118	1/1:21,0:20:29.35:214,29,0	0/1:26,0:23:92.54:93,0,108	1/1:13,0:10:5.94:41,6,0	0/0:17,0:15:16.88:0,17,121	0/1:21,0:19:59.95:60,0,153	0/0:10,0:8:9.85:0,10,108	0/1:12,0:12:27.90:28,0,116	0/1:13,0:12:25.42:25,0,70	0/1:22,0:21:8.39:8,0,136	0/1:32,0:28:30.58:31,0,363	0/0:16,0:15:5.88:0,6,194	0/1:21,0:17:88.22:88,0,177	0/0:12,0:10:8.77:0,9,58	1/1:16,0:10:16.41:99,16,0	1/1:16,0:16:14.86:105,15,0	1/1:36,0:32:11.94:83,12,0	0/0:10,0:10:11.98:0,12,112	0/1:13,0:13:30.61:31,0,128	0/1:37,0:36:34.58:35,0,359	0/1:17,0:17:71.43:71,0,110	0/1:20,0:17:10.25:126,0,10	1/1:9,0:9:11.58:82,12,0	1/1:4,0:3:5.88:36,6,0
chr10	99929651	.	G	GAA	773.08	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.631;DP=508;FS=0.000;HRun=9;HaplotypeScore=61.8220;InbreedingCoeff=0.9870;MQ=74.56;MQ0=1;MQRankSum=1.046;QD=26.66;ReadPosRankSum=0.130;VQSLOD=3.2197;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:29:64.67:868,65,0	0/0:7,0:7:21.05:0,21,223	0/0:24,0:21:36.90:0,37,358	0/0:15,0:12:24.05:0,24,248	0/0:24,0:24:66.15:0,66,700	0/0:25,0:25:66.14:0,66,702	0/0:20,0:20:48.10:0,48,508	0/0:19,0:19:51.10:0,51,529	0/0:19,0:19:51.04:0,51,530	0/0:19,0:18:48.11:0,48,511	0/0:10,0:10:30.07:0,30,318	0/0:9,0:9:27.07:0,27,287	0/0:18,0:18:36.06:0,36,383	0/0:19,0:20:50.84:0,51,522	0/0:19,0:19:54.13:0,54,573	0/0:11,0:11:24.04:0,24,247	0/0:23,0:23:59.48:0,59,603	0/0:15,0:15:38.95:0,39,401	0/0:22,0:22:45.05:0,45,456	0/0:20,0:20:51.09:0,51,539	0/0:17,0:17:42.06:0,42,430	0/0:14,0:14:39.09:0,39,414	0/0:16,0:17:50.86:0,51,521	0/0:28,0:30:86.59:0,87,863	0/0:18,0:18:54.14:0,54,574	0/0:23,0:23:60.14:0,60,638	0/0:13,0:13:27.02:0,27,287	0/0:8,0:8:24.06:0,24,255
chr10	99929802	.	T	TA	3605.38	PASS	AB=0.889;AC=17;AF=0.304;AN=56;BaseQRankSum=-11.223;DP=486;FS=1.281;HRun=10;HaplotypeScore=50.4680;InbreedingCoeff=0.9094;MQ=67.42;MQ0=0;MQRankSum=-0.075;QD=23.41;ReadPosRankSum=-3.455;VQSLOD=3.0844;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:62.92:0,63,517	0/0:6,0:6:17.97:0,18,145	0/0:10,0:10:17.19:0,17,129	0/1:7,1:7:14.14:14,0,91	0/0:22,1:23:27.88:0,28,432	1/1:4,0:14:25.57:128,26,0	0/0:14,0:16:34.87:0,35,265	1/1:5,29:34:87.15:893,87,0	0/0:21,0:22:49.95:0,50,400	0/0:29,0:29:68.89:0,69,567	0/0:9,0:10:22.99:0,23,178	0/0:10,0:10:29.91:0,30,240	0/0:19,0:19:50.91:0,51,414	0/0:17,0:17:50.94:0,51,419	0/0:15,0:15:38.93:0,39,317	0/0:18,0:18:53.91:0,54,440	0/0:16,0:16:38.92:0,39,320	0/0:11,0:11:23.94:0,24,193	1/1:4,15:19:45.08:464,45,0	1/1:2,19:21:54.10:564,54,0	1/1:0,7:7:21.05:224,21,0	0/0:23,0:23:47.93:0,48,394	0/0:16,0:17:34.98:0,35,277	0/0:26,0:27:70.95:0,71,572	0/0:17,1:18:12.95:0,13,313	1/1:2,16:18:23.58:455,24,0	1/1:0,15:15:33.08:352,33,0	1/1:0,18:18:48.12:512,48,0
chr10	99930344	.	T	TG	662.26	PASS	AB=0.579;AC=3;AF=0.054;AN=56;BaseQRankSum=0.918;DP=494;FS=7.629;HRun=5;HaplotypeScore=53.7555;InbreedingCoeff=0.6194;MQ=98.84;MQ0=0;MQRankSum=-2.815;QD=25.47;ReadPosRankSum=1.326;VQSLOD=2.6351;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.19:0,81,862	0/0:8,0:8:21.05:0,21,226	0/0:25,0:25:66.12:0,66,680	0/0:27,0:27:74.86:0,75,785	0/0:6,0:6:15.02:0,15,153	0/0:15,0:15:36.09:0,36,387	0/0:21,0:21:51.12:0,51,548	0/0:25,0:25:66.15:0,66,703	0/1:3,8:11:11.18:216,0,11	0/0:10,0:10:18:0,18,187	0/0:10,0:10:30.06:0,30,315	0/0:22,0:22:57.10:0,57,591	0/0:13,0:13:39.10:0,39,419	0/0:17,0:17:48.12:0,48,516	0/0:22,0:22:57.14:0,57,610	0/0:11,0:11:33.04:0,33,342	0/0:34,0:34:90.14:0,90,936	1/1:1,14:15:42.14:553,42,0	0/0:22,0:22:63.13:0,63,656	0/0:10,0:10:24.06:0,24,257	0/0:36,0:36:96.23:0,96,1024	0/0:14,0:14:39.10:0,39,419	0/0:10,0:10:24.06:0,24,257	0/0:31,0:31:90.22:0,90,966	0/0:3,0:3:6.01:0,6,64	0/0:13,0:13:33.08:0,33,349	0/0:13,0:13:39.10:0,39,418	0/0:19,0:19:54.10:0,54,568
chr10	99930501	.	CA	C	195.09	PASS	AB=0.738;AC=4;AF=0.071;AN=56;BaseQRankSum=6.554;DP=456;FS=6.669;HRun=1;HaplotypeScore=61.5855;InbreedingCoeff=0.3151;MQ=77.04;MQ0=1;MQRankSum=-4.006;QD=3.68;ReadPosRankSum=0.584;VQSLOD=0.0551;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.25:0,72,1142	0/0:7,0:7:21.07:0,21,334	0/0:27,0:21:9.20:0,9,511	0/1:36,1:21:31.57:32,0,350	0/0:10,0:10:30.10:0,30,480	0/0:18,0:18:54.17:0,54,828	0/0:13,0:13:39.13:0,39,613	0/0:16,0:16:45.15:0,45,720	0/1:1,10:11:14.84:248,0,15	0/0:17,0:17:51.17:0,51,802	0/0:15,0:15:45.15:0,45,716	0/0:12,0:12:33.11:0,33,528	0/0:12,0:12:36.09:0,36,520	0/0:16,0:16:48.15:0,48,739	0/0:19,0:19:57.19:0,57,910	0/0:13,0:13:39.13:0,39,622	0/0:23,0:23:66.22:0,66,1049	1/1:2,0:1:2.92:17,3,0	0/0:13,0:13:39.13:0,39,623	0/0:14,0:14:39.13:0,39,612	0/0:24,0:24:66.05:0,66,1055	0/0:14,0:14:42.14:0,42,666	0/0:10,0:10:30.10:0,30,479	0/0:33,0:33:93.26:0,93,1447	0/0:12,0:12:34.36:0,34,527	0/0:12,0:12:36.12:0,36,573	0/0:13,0:12:39.13:0,39,621	0/0:11,0:11:33.11:0,33,521
chr10	99930504	.	CCCTTTCTTT	C	739.95	PASS	AB=0.524;AC=3;AF=0.054;AN=56;BaseQRankSum=5.336;DP=461;FS=8.281;HRun=0;HaplotypeScore=131.4148;InbreedingCoeff=0.4723;MQ=79.23;MQ0=1;MQRankSum=-4.502;QD=56.92;ReadPosRankSum=2.002;VQSLOD=2.8013;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:66.23:0,66,3155	0/0:7,0:7:21.07:0,21,1028	0/0:32,0:22:50.67:0,51,1227	0/0:43,0:23:36.81:0,37,1011	0/0:10,0:10:30.10:0,30,1468	0/0:18,0:18:54.19:0,54,2568	0/0:13,0:13:39.13:0,39,1737	0/0:15,0:15:45.15:0,45,1858	0/1:1,10:11:99:778,0,112	0/0:17,0:17:48.16:0,48,2164	0/0:15,0:15:42.14:0,42,1921	0/0:12,0:12:32.96:0,33,1432	0/0:11,0:11:33.11:0,33,1329	0/0:16,0:16:48.16:0,48,2238	0/0:19,0:19:57.20:0,57,2700	0/0:13,0:13:39.13:0,39,1692	0/0:22,0:22:66.23:0,66,3111	1/1:2,0:1:3.01:54,3,0	0/0:15,0:15:45.15:0,45,2099	0/0:12,0:12:34.65:0,35,1412	0/0:26,0:26:71.27:0,71,3280	0/0:14,0:14:39.13:0,39,1729	0/0:10,0:10:30.10:0,30,1349	0/0:32,0:32:87.76:0,88,3969	0/0:11,0:11:30.57:0,31,1305	0/0:13,0:13:39.13:0,39,1748	0/0:13,0:12:39.13:0,39,1882	0/0:12,0:12:36.12:0,36,1644
chr10	99930576	.	T	TTACC	2137.51	PASS	AB=0.995;AC=26;AF=0.464;AN=56;BaseQRankSum=1.111;DP=393;FS=4.918;HRun=0;HaplotypeScore=81.8747;InbreedingCoeff=0.2583;MQ=58.94;MQ0=8;MQRankSum=-2.379;QD=7.77;ReadPosRankSum=-0.174;VQSLOD=1.7203;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:32:11.97:200,12,0	0/0:6,0:6:8.95:0,9,72	0/0:13,0:7:9:0,9,86	0/1:18,0:10:10.64:11,0,55	0/0:12,0:12:17.66:0,18,156	0/1:15,0:15:8.51:9,0,238	0/0:14,0:14:37.97:0,38,305	1/1:15,0:13:20.95:178,21,0	1/1:10,0:10:23.53:143,24,0	0/0:11,0:11:30.05:0,30,315	0/0:10,0:10:30:0,30,289	0/0:6,0:6:14.99:0,15,129	0/1:12,0:12:12.61:13,0,212	0/1:13,0:13:12.63:13,0,186	0/0:11,0:11:29.99:0,30,301	0/1:7,0:8:23.84:24,0,137	0/1:17,0:19:89.48:89,0,315	0/1:4,0:5:11.64:32,0,12	1/1:9,0:9:15.01:136,15,0	1/1:16,0:16:22.14:284,22,0	0/1:32,0:31:25.92:383,0,26	0/1:15,0:15:47.89:48,0,232	0/1:13,0:14:40.98:41,0,248	0/0:21,0:21:4.41:0,4,310	0/0:13,0:12:35.94:0,36,329	1/1:17,0:17:38.02:337,38,0	1/1:11,0:10:29.84:228,30,0	1/1:12,0:12:11.66:164,12,0
chr10	99930578	.	A	ACCTT	822.76	PASS	AB=0.990;AC=18;AF=0.429;AN=42;BaseQRankSum=-3.217;DP=396;FS=10.298;HRun=0;HaplotypeScore=94.0413;InbreedingCoeff=0.3487;MQ=58.19;MQ0=9;MQRankSum=1.588;QD=4.84;ReadPosRankSum=-1.250;VQSLOD=1.0537;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:32:6.02:111,6,0	0/1:6,0:6:0:0,0,0	./.	./.	0/1:10,0:10:0:0,0,0	1/1:14,0:14:3.01:68,3,0	./.	./.	./.	0/0:11,0:11:2.29:0,2,37	0/0:10,0:10:3.01:0,3,38	./.	1/1:12,1:14:3.48:69,3,0	1/1:12,0:12:6.02:92,6,0	0/0:11,0:11:5.61:0,6,88	1/1:8,0:8:6.01:93,6,0	0/1:19,0:19:31.83:188,0,32	0/0:6,0:6:2.99:0,3,24	0/0:9,0:9:3:0,3,26	0/0:19,0:19:1.85:0,2,43	0/0:33,0:32:14.22:0,14,221	1/1:13,4:17:7.27:140,7,0	1/1:13,1:14:8.96:131,9,0	0/1:22,1:21:15.77:62,0,16	0/0:10,0:12:5.94:0,6,46	0/0:12,0:15:6.01:0,6,56	./.	0/0:13,0:13:5.99:0,6,58
chr10	99930602	.	T	TTA	263.23	PASS	AB=0.868;AC=3;AF=0.054;AN=56;BaseQRankSum=6.236;DP=417;FS=0.979;HRun=0;HaplotypeScore=80.9563;InbreedingCoeff=-0.0720;MQ=53.04;MQ0=22;MQRankSum=-5.178;QD=6.42;ReadPosRankSum=-0.275;VQSLOD=3.0274;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:24.32:0,24,358	0/0:6,0:5:12.04:0,12,196	0/0:3,0:1:3.01:0,3,48	0/0:7,0:2:3.01:0,3,49	0/0:11,0:10:23.29:0,23,346	0/0:15,0:15:30.49:0,30,545	0/0:14,0:12:33.10:0,33,511	0/0:17,0:10:19.27:0,19,259	0/1:9,1:11:99:145,0,162	0/0:10,0:9:27.09:0,27,443	0/0:11,0:11:33.11:0,33,523	0/0:8,0:8:21.05:0,21,298	0/0:14,0:13:33.01:0,33,507	0/0:13,0:13:37.37:0,37,570	0/0:12,0:12:36.12:0,36,589	0/1:14,1:15:17.83:18,0,509	0/0:19,0:19:41.97:0,42,737	0/1:10,5:14:99:199,0,147	0/0:7,0:6:18.06:0,18,292	0/0:21,0:21:55.45:0,55,848	0/0:42,0:40:99:0,100,1487	0/0:22,0:22:60.02:0,60,807	0/0:15,0:14:42.04:0,42,585	0/0:26,0:24:35.50:0,35,734	0/0:12,0:11:33.10:0,33,495	0/0:20,0:20:60.17:0,60,902	0/0:12,0:11:33.11:0,33,538	0/0:9,0:9:27.07:0,27,403
chr10	99930832	.	TTA	T	1638.41	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.859;DP=666;FS=10.486;HRun=0;HaplotypeScore=83.5627;InbreedingCoeff=0.9473;MQ=93.45;MQ0=0;MQRankSum=-6.353;QD=45.51;ReadPosRankSum=3.304;VQSLOD=4.2360;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,154,3090	0/0:8,0:8:24.08:0,24,488	0/0:24,0:24:72.25:0,72,1420	0/0:35,0:35:96.33:0,96,1867	0/0:17,0:17:48.16:0,48,975	0/0:15,0:15:45.15:0,45,898	0/0:34,0:34:99:0,102,2073	0/0:35,0:35:99:0,105,2067	1/1:0,17:17:51.17:830,51,0	0/0:22,0:22:66.22:0,66,1306	0/0:18,0:18:54.19:0,54,1081	0/0:25,0:25:75.26:0,75,1524	0/0:21,0:21:63.21:0,63,1244	0/0:28,0:28:84.28:0,84,1648	0/0:39,0:39:99:0,114,2246	0/0:26,1:27:32.41:0,32,1522	0/0:33,0:32:99:0,99,2011	1/1:0,19:19:57.19:930,57,0	0/0:27,0:27:81.28:0,81,1643	0/0:18,0:18:54.19:0,54,1097	0/0:34,0:34:99:0,102,2073	0/0:22,0:22:60.21:0,60,1218	0/0:20,0:20:57.20:0,57,1158	0/0:16,0:16:48.16:0,48,959	0/0:12,0:12:36.11:0,36,697	0/0:23,0:23:69.24:0,69,1402	0/0:24,0:24:69.24:0,69,1384	0/0:2,0:2:6.02:0,6,122
chr10	99930954	.	G	GGGCTAGC	1826.81	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.787;DP=608;FS=0.915;HRun=0;HaplotypeScore=137.1110;InbreedingCoeff=0.9567;MQ=89.86;MQ0=0;MQRankSum=-7.083;QD=83.04;ReadPosRankSum=-0.077;VQSLOD=4.3839;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,144,3648	0/0:9,0:9:24.08:0,24,616	0/0:22,0:23:60.18:0,60,1285	0/0:24,0:24:69.24:0,69,1714	0/0:30,0:30:84.26:0,84,1988	0/0:18,0:18:54.19:0,54,1403	0/0:26,0:26:69.23:0,69,1739	0/0:25,0:25:69.24:0,69,1623	1/1:4,8:12:30.10:1110,30,0	0/0:15,0:15:42.11:0,42,907	0/0:12,0:12:36.12:0,36,885	0/0:23,0:23:69.22:0,69,1704	0/0:18,0:18:51.17:0,51,1245	0/0:21,0:21:54.16:0,54,1230	0/0:21,0:21:54.17:0,54,1350	0/0:21,0:21:60.20:0,60,1474	0/0:37,0:37:99:0,99,2472	1/1:3,5:10:21.07:837,21,0	0/0:20,0:20:54.16:0,54,1193	0/0:21,0:21:60.21:0,60,1532	0/0:40,0:40:99:0,105,2637	0/0:16,0:16:45.15:0,45,1168	0/0:20,0:20:60.21:0,60,1497	0/0:35,0:35:99:0,105,2609	0/0:21,0:21:63.20:0,63,1553	0/0:19,0:19:54.17:0,54,1324	0/0:13,0:13:36.12:0,36,935	0/0:6,0:6:7.43:0,7,357
chr10	99931097	.	CCCG	C	389.69	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=2.333;DP=290;FS=14.427;HRun=0;HaplotypeScore=49.0746;InbreedingCoeff=0.2584;MQ=76.32;MQ0=0;MQRankSum=-1.600;QD=7.22;ReadPosRankSum=-0.403;VQSLOD=0.8451;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:14.40:0,14,134	0/0:8,0:8:14.88:0,15,185	0/0:11,0:10:14.05:0,14,288	0/1:13,0:12:30.37:30,0,251	0/0:11,0:11:26.99:0,27,368	0/0:5,0:5:5.97:0,6,53	0/0:17,0:17:41.94:0,42,558	0/0:4,0:4:9.01:0,9,103	1/1:1,5:6:6.02:92,6,0	0/0:13,0:13:26.86:0,27,351	0/0:11,0:11:23.85:0,24,299	0/0:14,0:14:7.08:0,7,353	0/0:19,0:19:50.30:0,50,583	0/1:15,0:15:14.56:15,0,308	0/0:14,0:14:7.85:0,8,319	0/0:10,0:10:23.97:0,24,289	0/0:28,0:28:80.88:0,81,1084	1/1:2,13:15:24.07:353,24,0	0/0:2,0:2:5.87:0,6,35	0/1:3,0:3:18.80:19,0,32	0/0:7,0:7:8.96:0,9,81	0/0:14,0:14:22.12:0,22,228	0/0:6,0:6:8.91:0,9,146	0/0:15,0:15:17.24:0,17,511	0/0:11,0:11:16.98:0,17,247	0/0:4,0:4:8.99:0,9,97	0/1:2,0:2:19.68:20,0,28	0/0:1,0:1:3.01:0,3,41
chr10	99932007	.	A	ATG	1336.35	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.447;DP=826;FS=8.556;HRun=0;HaplotypeScore=125.6545;InbreedingCoeff=0.9964;MQ=60.65;MQ0=2;MQRankSum=-0.502;QD=31.82;ReadPosRankSum=0.856;VQSLOD=5.6611;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:93.26:0,93,1163	0/0:10,0:10:30.08:0,30,372	0/0:40,0:22:48.07:0,48,586	0/0:32,0:19:21.48:0,21,307	0/0:28,0:28:69.18:0,69,855	0/0:24,0:24:51.17:0,51,674	0/0:38,0:38:83.74:0,84,1036	0/0:33,0:33:81.23:0,81,1014	1/1:10,18:28:57.19:953,57,0	0/0:31,0:31:81.26:0,81,1031	0/0:26,0:26:72.23:0,72,925	0/0:45,0:45:99:0,105,1333	0/0:33,0:33:78.24:0,78,987	0/0:37,0:37:99:0,102,1302	0/0:30,0:30:81.25:0,81,1028	0/0:35,1:36:45.68:0,46,1117	0/0:30,0:30:78.19:0,78,956	1/1:2,12:14:30.10:505,30,0	0/0:21,0:19:39.10:0,39,488	0/0:22,0:22:39.09:0,39,484	0/0:44,0:44:81.13:0,81,1013	0/0:28,0:28:71.82:0,72,897	0/0:25,0:25:63.20:0,63,809	0/0:28,0:28:75.18:0,75,931	0/0:35,0:35:99:0,102,1297	0/0:27,0:27:66.20:0,66,833	0/0:23,0:22:45.09:0,45,545	0/0:11,0:11:24.06:0,24,294
chr10	99932052	.	T	TGAGA	3711.10	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-3.312;DP=704;FS=6.925;HRun=0;HaplotypeScore=146.2755;InbreedingCoeff=0.9546;MQ=56.18;MQ0=9;MQRankSum=-2.991;QD=21.96;ReadPosRankSum=-1.937;VQSLOD=2.7374;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:47:75.08:0,75,699	0/0:11,0:11:27.09:0,27,448	0/0:48,0:23:21.22:0,21,402	0/0:32,0:16:3.51:0,4,174	0/0:20,0:21:48.09:0,48,669	0/0:7,0:16:20.24:0,20,186	0/0:30,0:35:72.20:0,72,1093	1/1:12,10:26:47.62:757,48,0	0/0:21,0:18:15.06:0,15,343	0/0:27,0:27:66.22:0,66,1076	0/0:16,0:16:24.07:0,24,379	0/0:17,0:20:26.39:0,26,495	0/0:15,0:16:42.08:0,42,618	0/0:33,0:33:75.85:0,76,1153	0/0:28,0:28:69.18:0,69,1030	0/0:24,0:25:60.15:0,60,873	0/0:21,0:21:54.13:0,54,794	0/0:9,0:9:21.02:0,21,276	1/1:14,9:23:33.02:619,33,0	1/1:9,17:27:11.81:241,12,0	1/1:14,22:40:31.30:631,31,0	0/0:23,0:24:48.10:0,48,696	0/0:19,0:19:25.90:0,26,490	0/0:31,0:32:86.93:0,87,1269	0/0:32,0:32:72.10:0,72,1077	1/1:14,3:18:24.27:427,24,0	1/1:5,13:24:44.76:739,45,0	1/1:4,7:11:13.60:297,14,0
chr10	99932090	.	GGAGAGAGA	G	135.92	PASS	AB=1.000;AC=6;AF=0.120;AN=50;BaseQRankSum=3.207;DP=649;FS=7.860;HRun=0;HaplotypeScore=167.5871;InbreedingCoeff=0.2711;MQ=46.36;MQ0=76;MQRankSum=-2.115;QD=1.64;ReadPosRankSum=0.125;VQSLOD=2.1597;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:30.09:0,30,648	0/0:9,0:9:2.99:0,3,24	./.	./.	0/0:16,0:15:11.32:0,11,185	1/1:9,4:17:0.52:159,1,0	0/1:33,0:30:24.11:24,0,470	0/0:23,0:17:2.94:0,3,18	1/1:17,0:13:5.63:33,6,0	0/0:16,0:16:21.05:0,21,498	0/0:11,0:10:9.03:0,9,296	0/0:12,0:10:9.03:0,9,236	0/0:17,0:16:28.34:0,28,730	0/0:22,0:25:36.06:0,36,729	0/0:17,0:16:18.06:0,18,448	0/0:25,0:24:27.09:0,27,968	0/1:15,0:14:30.56:31,0,418	./.	0/0:18,0:12:13.29:0,13,297	0/0:20,0:16:3.95:0,4,49	0/0:31,0:28:12.51:0,13,264	0/0:22,0:22:21.04:0,21,432	0/0:11,0:14:9.97:0,10,331	0/0:43,0:41:66.17:0,66,1783	0/0:23,0:21:21.54:0,22,627	0/0:19,0:17:32.78:0,33,777	0/0:20,0:19:6.91:0,7,84	0/0:16,0:10:9.03:0,9,181
chr10	99932134	.	A	AGTGTGTGT	4320.31	PASS	AB=0.956;AC=16;AF=0.296;AN=54;BaseQRankSum=0.680;DP=623;FS=2.009;HRun=0;HaplotypeScore=164.5001;InbreedingCoeff=0.7660;MQ=50.35;MQ0=35;MQRankSum=-4.364;QD=17.14;ReadPosRankSum=-3.510;VQSLOD=2.9995;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:40:5.33:5,0,458	./.	0/0:24,0:6:13.93:0,14,355	0/1:25,0:9:39.42:39,0,363	0/0:14,0:14:21.54:0,22,460	1/1:14,7:23:6.02:157,6,0	0/0:25,0:23:42.14:0,42,1025	1/1:35,0:34:48.14:970,48,0	0/0:2,0:7:9.03:0,9,169	0/0:15,0:14:24.08:0,24,509	0/0:14,0:13:24.08:0,24,577	0/0:23,0:21:39.44:0,39,1050	0/0:25,0:25:63.17:0,63,1482	0/0:27,0:26:56.84:0,57,1339	0/0:18,0:17:27.04:0,27,672	0/0:30,0:30:33.47:0,33,1242	0/0:23,0:23:45.10:0,45,1023	0/0:2,0:3:9.03:0,9,168	1/1:21,0:21:32.57:525,33,0	1/1:27,1:27:28:755,28,0	1/1:36,0:31:26.52:672,27,0	0/0:26,0:26:45.15:0,45,1125	0/0:21,0:21:38.77:0,39,904	0/0:34,0:31:57.16:0,57,1344	0/0:26,0:25:39.11:0,39,861	1/1:24,0:23:23.91:608,24,0	1/1:18,0:18:24.08:589,24,0	0/0:7,0:5:1.91:0,2,30
chr10	99932174	.	TC	T	675.76	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.748;DP=524;FS=0.835;HRun=2;HaplotypeScore=84.4993;InbreedingCoeff=0.9613;MQ=82.20;MQ0=0;MQRankSum=-6.175;QD=30.72;ReadPosRankSum=-1.047;VQSLOD=3.0314;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.21:0,75,1099	0/0:6,0:6:18.06:0,18,270	0/0:22,0:22:46.14:0,46,767	0/0:23,0:19:40.87:0,41,485	0/0:11,0:11:27.06:0,27,364	0/0:14,0:14:18.06:0,18,268	0/0:21,0:21:63.21:0,63,942	0/0:22,0:22:60.13:0,60,848	1/1:1,13:14:39.11:486,39,0	0/0:16,0:16:48.16:0,48,719	0/0:13,0:13:39.12:0,39,563	0/0:21,0:21:63.20:0,63,922	0/0:28,0:28:81.25:0,81,1174	0/0:22,0:22:66.21:0,66,969	0/0:21,0:21:63.20:0,63,924	0/0:24,0:24:72.23:0,72,1051	0/0:20,0:20:60.18:0,60,867	1/1:0,8:8:24.08:310,24,0	0/0:13,0:13:39.12:0,39,546	0/0:25,0:25:72.22:0,72,1035	0/0:34,0:34:90.22:0,90,1264	0/0:24,0:24:69.21:0,69,992	0/0:14,0:14:39.13:0,39,582	0/0:25,0:25:57.18:0,57,829	0/0:20,0:20:60.19:0,60,878	0/0:15,0:15:42.13:0,42,610	0/0:15,0:14:42.01:0,42,573	0/0:5,0:5:9.03:0,9,135
chr10	99932233	.	GTTT	G	1118.28	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.390;DP=560;FS=0.000;HRun=7;HaplotypeScore=82.8678;InbreedingCoeff=0.9956;MQ=72.09;MQ0=0;MQRankSum=-5.213;QD=36.07;ReadPosRankSum=0.223;VQSLOD=2.5741;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,2109	0/0:10,0:10:30.10:0,30,638	0/0:17,0:16:29.38:0,29,661	0/0:10,0:10:20.09:0,20,397	0/0:20,0:20:54.16:0,54,1088	0/0:16,0:16:48.16:0,48,1072	0/0:16,0:16:45.13:0,45,923	0/0:37,0:37:93.27:0,93,1839	1/1:1,20:21:57.19:872,57,0	0/0:18,0:18:54.19:0,54,1194	0/0:14,0:14:42.13:0,42,897	0/0:15,0:15:42.14:0,42,938	0/0:20,0:20:57.20:0,57,1240	0/0:20,0:20:57.18:0,57,1232	0/0:21,0:21:60.21:0,60,1332	0/0:15,0:15:42.13:0,42,897	0/0:19,0:19:57.20:0,57,1242	1/1:2,8:10:24.08:367,24,0	0/0:14,0:14:42.13:0,42,880	0/0:26,0:26:75.26:0,75,1661	0/0:37,0:37:99:0,111,2344	0/0:18,0:18:54.19:0,54,1205	0/0:23,0:23:69.24:0,69,1541	0/0:20,0:20:57.20:0,57,1273	0/0:26,0:26:72.25:0,72,1607	0/0:20,0:20:60.21:0,60,1335	0/0:32,0:30:90.31:0,90,2006	0/0:11,0:11:33.11:0,33,737
chr10	99933664	.	G	GCCTCTGCC	4152.41	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.463;DP=683;FS=2.086;HRun=0;HaplotypeScore=180.1454;InbreedingCoeff=0.9858;MQ=65.79;MQ0=0;MQRankSum=-7.688;QD=115.34;ReadPosRankSum=1.289;VQSLOD=4.6762;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,2910	0/0:7,0:7:21.07:0,21,605	0/0:19,0:19:48.16:0,48,1132	0/0:21,0:22:14.80:0,15,1204	0/0:25,0:25:69.24:0,69,1797	0/0:32,0:32:96.33:0,96,2728	0/0:25,0:25:72.25:0,72,2009	0/0:16,0:16:48.16:0,48,1122	1/1:4,18:24:66.68:2679,67,0	0/0:30,0:29:87.29:0,87,2294	0/0:22,0:22:63.21:0,63,1659	0/0:25,0:25:75.26:0,75,2069	0/0:26,0:26:69.22:0,69,1931	0/0:30,0:30:90.27:0,90,2437	0/0:25,0:25:75.23:0,75,1988	0/0:25,0:26:18.88:0,19,2071	0/0:40,0:40:99:0,114,3156	1/1:1,10:12:36.11:1474,36,0	0/0:20,0:20:57.09:0,57,1323	0/0:29,0:29:84.26:0,84,2094	0/0:35,0:35:99:0,105,2846	0/0:24,0:24:72.25:0,72,1920	0/0:13,0:13:33.11:0,33,878	0/0:27,0:27:81.21:0,81,2163	0/0:17,0:17:48.16:0,48,1239	0/0:34,0:34:96.29:0,96,2362	0/0:27,0:27:81.25:0,81,2260	0/0:14,0:14:39.10:0,39,963
chr10	99933667	.	C	CT	1296.81	PASS	AB=0.964;AC=5;AF=0.089;AN=56;BaseQRankSum=10.008;DP=691;FS=0.632;HRun=0;HaplotypeScore=87.6420;InbreedingCoeff=0.8062;MQ=65.01;MQ0=0;MQRankSum=-9.528;QD=20.92;ReadPosRankSum=1.735;VQSLOD=5.2693;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1443	0/0:7,0:7:21.06:0,21,276	0/0:19,0:18:54.09:0,54,704	0/0:21,0:21:59.31:0,59,741	0/0:27,0:27:75.24:0,75,1030	0/0:33,0:33:96.32:0,96,1341	0/0:27,0:27:78.24:0,78,1070	0/0:19,0:19:45.15:0,45,629	1/1:3,20:23:65.96:912,66,0	0/0:33,0:32:93.24:0,93,1244	0/0:22,0:22:63.17:0,63,858	0/0:25,0:25:75.24:0,75,1030	0/0:25,0:25:75.23:0,75,1019	0/0:29,0:29:87.29:0,87,1215	0/0:25,0:25:72.24:0,72,999	0/1:26,1:27:7.58:8,0,947	0/0:41,0:40:99:0,117,1589	1/1:1,11:12:35.61:504,36,0	0/0:23,0:23:51.17:0,51,712	0/0:27,0:27:75.25:0,75,1043	0/0:33,0:33:99:0,99,1360	0/0:25,0:25:75.24:0,75,1031	0/0:14,0:14:36.12:0,36,501	0/0:27,0:27:81.26:0,81,1115	0/0:17,0:17:48.16:0,48,670	0/0:34,0:34:90.17:0,90,1225	0/0:26,0:26:78.26:0,78,1087	0/0:14,0:14:39.13:0,39,541
chr10	99933731	.	TC	T	1415.10	PASS	AB=0.885;AC=5;AF=0.089;AN=56;BaseQRankSum=10.277;DP=729;FS=5.731;HRun=2;HaplotypeScore=84.1259;InbreedingCoeff=0.7800;MQ=79.44;MQ0=0;MQRankSum=-3.535;QD=21.12;ReadPosRankSum=0.496;VQSLOD=3.4188;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1438	0/0:9,0:9:27.09:0,27,401	0/0:24,0:24:66.20:0,66,935	0/0:21,0:21:56.82:0,57,745	0/0:33,0:33:96.30:0,96,1398	0/0:25,0:25:75.25:0,75,1124	0/0:28,0:28:84.22:0,84,1232	0/0:29,0:29:84.26:0,84,1200	1/1:2,24:26:69.17:875,69,0	0/0:41,0:41:99:0,117,1657	0/0:24,0:24:69.22:0,69,1013	0/0:22,0:22:63.17:0,63,884	0/0:29,0:29:84.20:0,84,1222	0/0:34,0:34:99:0,102,1526	0/0:30,0:30:90.26:0,90,1289	0/1:20,3:23:47.53:48,0,792	0/0:33,0:33:90.30:0,90,1349	1/1:0,18:18:48.16:623,48,0	0/0:22,0:22:60.19:0,60,880	0/0:36,0:36:99:0,102,1506	0/0:19,0:19:54.17:0,54,789	0/0:27,0:27:81.26:0,81,1191	0/0:26,0:26:78.25:0,78,1146	0/0:33,0:33:99:0,99,1483	0/0:17,0:17:45.15:0,45,673	0/0:22,0:22:66.21:0,66,953	0/0:30,0:30:84.27:0,84,1237	0/0:14,0:14:42.14:0,42,629
chr10	99933841	.	C	CA	1394.72	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.430;DP=691;FS=2.093;HRun=4;HaplotypeScore=73.1556;InbreedingCoeff=0.9952;MQ=78.44;MQ0=0;MQRankSum=-1.769;QD=31.70;ReadPosRankSum=-0.604;VQSLOD=3.7959;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,1156	0/0:12,0:12:36.09:0,36,400	0/0:20,0:20:18.63:0,19,414	0/0:21,0:21:57.09:0,57,616	0/0:29,0:29:78.22:0,78,883	0/0:19,0:19:48.10:0,48,544	0/0:26,0:26:72.18:0,72,804	0/0:37,0:37:99:0,105,1171	1/1:2,24:26:66.22:901,66,0	0/0:25,0:25:72.20:0,72,810	0/0:16,0:16:45.13:0,45,510	0/0:21,0:21:60.15:0,60,671	0/0:27,0:27:75.04:0,75,822	0/0:28,0:28:81.23:0,81,915	0/0:30,0:30:84.21:0,84,933	0/0:26,1:27:37.24:0,37,789	0/0:30,0:30:81.16:0,81,884	1/1:4,14:18:48.08:615,48,0	0/0:17,0:17:48.14:0,48,544	0/0:27,0:27:75.21:0,75,851	0/0:29,0:29:78.22:0,78,884	0/0:24,0:24:63.16:0,63,697	0/0:19,0:19:39.11:0,39,442	0/0:26,0:26:78.18:0,78,870	0/0:25,0:25:72.16:0,72,788	0/0:28,0:28:75.20:0,75,843	0/0:37,0:35:99:0,108,1214	0/0:10,0:10:24.07:0,24,272
chr10	99934265	.	AG	A	1998.05	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.898;DP=731;FS=6.777;HRun=3;HaplotypeScore=76.6589;InbreedingCoeff=0.9994;MQ=83.77;MQ0=0;MQRankSum=-0.616;QD=32.75;ReadPosRankSum=2.203;VQSLOD=4.1349;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,1996	0/0:10,0:10:30.09:0,30,413	0/0:23,0:23:60.10:0,60,800	0/0:24,0:24:62.40:0,62,725	0/0:24,0:24:72.20:0,72,978	0/0:20,0:20:60.19:0,60,843	0/0:27,0:27:75.25:0,75,1076	0/0:25,0:25:72.24:0,72,1034	1/1:0,24:24:69.22:855,69,0	0/0:37,0:37:99:0,108,1517	0/0:12,0:12:36.10:0,36,488	0/0:25,0:25:75.25:0,75,1078	0/0:26,0:26:75.22:0,75,1055	0/0:24,0:24:72.24:0,72,1034	0/0:31,0:31:93.31:0,93,1338	0/0:25,0:25:75.25:0,75,1079	0/0:40,0:40:99:0,120,1690	1/1:0,37:37:99:1265,102,0	0/0:29,0:29:84.25:0,84,1164	0/0:28,0:28:81.23:0,81,1111	0/0:36,0:36:99:0,108,1532	0/0:22,0:22:66.22:0,66,950	0/0:26,0:26:75.25:0,75,1077	0/0:28,0:27:81.27:0,81,1160	0/0:24,0:24:69.23:0,69,991	0/0:24,0:24:69.22:0,69,976	0/0:21,0:21:60.20:0,60,862	0/0:10,0:10:30.10:0,30,423
chr10	99934649	.	A	ATATC	909.38	PASS	AB=0.958;AC=5;AF=0.089;AN=56;BaseQRankSum=3.321;DP=586;FS=17.197;HRun=0;HaplotypeScore=110.5243;InbreedingCoeff=0.7789;MQ=80.63;MQ0=0;MQRankSum=-5.832;QD=20.67;ReadPosRankSum=-0.034;VQSLOD=2.0719;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:42.13:0,42,711	0/0:15,0:15:33.11:0,33,575	0/0:26,0:24:60.12:0,60,952	0/0:22,0:19:27.09:0,27,477	0/0:22,0:22:66.23:0,66,1136	0/0:22,0:22:60.19:0,60,996	0/0:21,0:21:57.18:0,57,978	0/0:40,0:40:96.30:0,96,1606	1/1:2,10:12:27.09:647,27,0	0/0:29,0:29:72.25:0,72,1272	0/0:17,0:17:48.16:0,48,816	0/0:17,0:17:42.14:0,42,736	0/0:16,0:16:42.14:0,42,736	0/0:17,0:17:42.14:0,42,733	0/0:22,0:22:60.21:0,60,1050	0/1:22,1:23:16.87:17,0,872	0/0:21,0:21:54.18:0,54,945	1/1:6,3:9:18.01:373,18,0	0/0:16,0:16:45.15:0,45,795	0/0:30,0:30:84.25:0,84,1388	0/0:18,0:18:51.17:0,51,901	0/0:21,0:21:54.15:0,54,828	0/0:21,0:21:57.17:0,57,951	0/0:12,0:12:33.11:0,33,577	0/0:25,0:25:69.24:0,69,1210	0/0:33,0:33:91.18:0,91,1515	0/0:15,0:15:42.13:0,42,706	0/0:21,0:21:63.22:0,63,1103
chr10	99934662	.	A	ACTAT	3066.10	PASS	AB=0.797;AC=10;AF=0.200;AN=50;BaseQRankSum=-9.065;DP=583;FS=1.955;HRun=0;HaplotypeScore=101.3061;InbreedingCoeff=0.6799;MQ=67.67;MQ0=3;MQRankSum=0.942;QD=21.75;ReadPosRankSum=-0.670;VQSLOD=3.2389;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,13:24:28.04:333,0,28	1/1:4,9:14:21.07:455,21,0	./.	./.	1/1:14,11:27:33.11:767,33,0	0/0:22,0:22:25.13:0,25,520	0/0:24,0:24:24.08:0,24,369	./.	0/0:9,0:9:2.22:0,2,7	0/0:31,0:31:63.19:0,63,928	0/1:16,1:17:43.07:43,0,342	0/0:18,0:18:27.09:0,27,415	0/0:14,0:14:24.08:0,24,369	0/0:14,0:14:18.06:0,18,276	0/0:23,0:23:36.10:0,36,531	0/0:21,0:21:21.06:0,21,302	0/0:18,0:18:24.08:0,24,365	0/0:7,0:7:6:0,6,54	0/0:18,0:16:12.04:0,12,185	0/0:33,0:33:54.17:0,54,808	0/0:17,0:17:15.05:0,15,231	0/0:18,0:18:24.07:0,24,348	0/0:23,0:23:42.07:0,42,594	0/0:11,0:11:24.08:0,24,365	0/0:27,0:27:39.12:0,39,573	1/1:15,19:37:18.07:1277,18,0	0/0:20,0:21:36.03:0,36,463	1/1:16,5:22:15.05:351,15,0
chr10	99935521	.	AGTTTGCG	A	8907.46	PASS	AB=0.512;AC=13;AF=0.232;AN=56;BaseQRankSum=13.867;DP=616;FS=0.000;HRun=0;HaplotypeScore=148.6247;InbreedingCoeff=0.8608;MQ=90.47;MQ0=0;MQRankSum=-15.625;QD=67.48;ReadPosRankSum=0.726;VQSLOD=5.0536;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.18:0,51,1967	0/0:6,0:6:12.04:0,12,480	0/0:35,0:35:99:0,99,3681	0/0:24,0:24:60.70:0,61,2106	0/0:22,0:22:66.23:0,66,2543	0/0:29,0:29:87.30:0,87,3323	0/0:19,0:19:51.18:0,51,2035	1/1:3,25:28:75.26:1940,75,0	0/0:16,0:16:36.12:0,36,1409	0/0:25,0:25:69.21:0,69,2430	0/0:23,0:23:64.09:0,64,2286	0/0:23,0:23:69.22:0,69,2455	0/0:26,0:26:78.27:0,78,3010	0/0:19,0:19:54.19:0,54,2084	0/0:21,0:21:63.22:0,63,2519	0/0:19,0:19:54.19:0,54,2156	0/0:24,0:24:67.36:0,67,2653	0/0:22,0:22:45.15:0,45,1739	1/1:2,19:21:57.19:1480,57,0	1/1:0,27:27:75.26:1947,75,0	1/1:2,3:5:6.02:156,6,0	0/0:32,0:32:96.33:0,96,3821	0/0:26,0:26:72.25:0,72,2876	0/0:39,0:39:99:0,117,4553	0/0:16,0:16:48.16:0,48,1802	0/1:1,20:21:56.79:1437,0,57	1/1:1,26:27:66.23:1713,66,0	1/1:0,3:3:9.03:234,9,0
chr10	99935551	.	AAAAC	A	1530.27	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.873;DP=638;FS=0.686;HRun=0;HaplotypeScore=132.5222;InbreedingCoeff=0.9854;MQ=74.97;MQ0=1;MQRankSum=-0.774;QD=39.24;ReadPosRankSum=3.511;VQSLOD=3.9350;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:31.20:0,31,971	0/0:5,0:5:15.05:0,15,354	0/0:32,0:29:75.22:0,75,1250	0/0:33,0:23:36.76:0,37,1053	0/0:27,0:27:81.27:0,81,1974	0/0:24,0:24:72.24:0,72,1814	0/0:25,0:25:69.23:0,69,1695	0/0:34,0:34:93.26:0,93,1887	1/1:0,17:17:39.13:740,39,0	0/0:21,0:21:63.21:0,63,1523	0/0:22,0:22:66.21:0,66,1593	0/0:25,0:25:75.24:0,75,1630	0/0:27,0:27:78.25:0,78,1756	0/0:18,0:18:51.17:0,51,1222	0/0:21,0:21:57.19:0,57,1360	0/0:15,0:15:39.13:0,39,854	0/0:27,0:27:75.22:0,75,1645	1/1:1,21:22:48.16:911,48,0	0/0:19,0:19:51.16:0,51,991	0/0:33,0:33:90.30:0,90,2162	0/0:8,0:8:18.06:0,18,460	0/0:29,0:29:81.27:0,81,1960	0/0:25,0:25:69.22:0,69,1661	0/0:36,0:36:99:0,102,2336	0/0:13,0:13:36.12:0,36,822	0/0:25,0:25:72.23:0,72,1556	0/0:30,0:30:84.28:0,84,1913	0/0:7,0:7:21.07:0,21,559
chr10	99935885	.	G	GGTGTGTGTGTGTGTGT	2112.28	PASS	AB=0.939;AC=5;AF=0.089;AN=56;BaseQRankSum=2.079;DP=690;FS=1.098;HRun=0;HaplotypeScore=272.1925;InbreedingCoeff=0.7513;MQ=70.64;MQ0=11;MQRankSum=-4.991;QD=34.07;ReadPosRankSum=1.891;VQSLOD=2.6147;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:30:76.05:76,0,2654	0/0:9,0:9:21.06:0,21,671	0/0:56,0:30:34.32:0,34,788	0/0:46,0:15:13.26:0,13,210	0/0:32,0:32:87.30:0,87,3569	0/0:19,0:19:45.14:0,45,1767	0/0:27,0:27:51.17:0,51,1814	0/0:25,0:25:60.20:0,60,1637	1/1:10,2:19:12.04:918,12,0	0/0:30,0:30:78.27:0,78,3112	0/0:22,0:22:60.20:0,60,2308	0/0:19,0:19:51.17:0,51,2178	0/0:27,0:27:66.22:0,66,2591	0/0:16,0:16:45.13:0,45,1810	0/0:29,0:29:78.27:0,78,3026	0/0:17,0:19:38.86:0,39,1509	0/0:18,0:18:36.12:0,36,1471	1/1:4,2:10:18.06:1242,18,0	0/0:30,0:30:75.26:0,75,2644	0/0:32,0:32:81.26:0,81,3163	0/0:25,0:25:54.18:0,54,2198	0/0:23,0:23:66.23:0,66,2655	0/0:19,0:19:39.13:0,39,1543	0/0:20,0:20:42.14:0,42,1666	0/0:19,0:19:54.18:0,54,2229	0/0:30,0:31:78.27:0,78,3038	0/0:19,0:19:51.18:0,51,2202	0/0:15,0:15:42.14:0,42,1617
chr10	99936565	.	TAC	T	1260.51	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.727;DP=702;FS=0.000;HRun=0;HaplotypeScore=86.7750;InbreedingCoeff=0.9976;MQ=93.37;MQ0=0;MQRankSum=-1.891;QD=31.51;ReadPosRankSum=1.103;VQSLOD=5.5278;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,163,2906	0/0:11,0:11:33.11:0,33,594	0/0:33,0:33:80.54:0,81,1481	0/0:28,0:29:60.72:0,61,1167	0/0:26,0:26:66.23:0,66,1188	0/0:20,0:20:54.19:0,54,972	0/0:16,0:16:48.16:0,48,863	0/0:36,0:36:96.32:0,96,1695	1/1:1,25:26:60.14:840,60,0	0/0:28,0:28:84.28:0,84,1485	0/0:26,0:26:72.24:0,72,1255	0/0:11,0:11:33.10:0,33,564	0/0:28,0:28:81.28:0,81,1450	0/0:26,0:26:78.27:0,78,1391	0/0:24,0:24:69.24:0,69,1242	0/0:33,0:33:99:0,99,1764	0/0:21,0:21:63.22:0,63,1126	1/1:1,13:14:39.13:542,39,0	0/0:24,0:24:69.23:0,69,1211	0/0:22,0:22:57.20:0,57,1020	0/0:48,0:48:99:0,138,2413	0/0:9,0:9:21.07:0,21,378	0/0:24,0:24:60.21:0,60,1064	0/0:31,0:30:93.32:0,93,1662	0/0:26,0:26:75.26:0,75,1342	0/0:22,0:22:63.22:0,63,1128	0/0:15,0:14:42.13:0,42,726	0/0:19,0:19:51.17:0,51,918
chr10	99936755	.	A	AT	6618.67	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-7.015;DP=581;FS=24.155;HRun=8;HaplotypeScore=57.1248;InbreedingCoeff=0.9983;MQ=72.16;MQ0=0;MQRankSum=-0.876;QD=27.81;ReadPosRankSum=-0.215;VQSLOD=3.1409;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:57.10:641,57,0	0/0:15,0:15:42.02:0,42,384	0/0:15,0:15:28.32:0,28,229	0/0:10,0:11:20.53:0,21,173	0/0:29,0:29:78.03:0,78,709	1/1:1,15:16:42.09:471,42,0	0/0:19,0:19:57.03:0,57,521	1/1:4,29:33:90.08:981,90,0	1/1:5,20:25:57.11:639,57,0	0/0:34,0:34:96.04:0,96,873	0/0:19,0:19:57.03:0,57,522	0/0:12,0:12:35.99:0,36,320	0/0:26,0:26:75.02:0,75,682	0/0:17,0:16:45.02:0,45,412	0/0:23,0:23:63.03:0,63,576	0/0:20,1:21:20.34:0,20,430	0/0:29,0:29:78.03:0,78,714	1/1:2,15:17:39.11:448,39,0	1/1:3,12:15:36.11:416,36,0	1/1:3,28:31:75.14:834,75,0	1/1:3,12:15:27.08:312,27,0	0/0:12,0:12:33.02:0,33,302	0/0:19,0:19:57.03:0,57,522	0/0:16,0:16:48.03:0,48,439	0/0:26,0:26:78.04:0,78,713	1/1:1,28:29:84.18:944,84,0	1/1:1,20:21:48.14:554,48,0	1/1:0,11:11:33.10:381,33,0
chr10	99936905	.	C	CCTCT	3188.22	PASS	AB=0.829;AC=20;AF=0.357;AN=56;BaseQRankSum=-0.942;DP=616;FS=41.066;HRun=0;HaplotypeScore=134.4269;InbreedingCoeff=0.7772;MQ=65.33;MQ0=4;MQRankSum=-2.846;QD=12.50;ReadPosRankSum=-6.918;VQSLOD=-0.5348;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:28:37.44:0,37,371	0/0:5,0:5:9.02:0,9,120	0/0:28,0:17:12.04:0,12,180	0/1:24,0:12:15.86:16,0,65	0/0:29,0:29:31.10:0,31,627	1/1:20,0:20:12.49:226,12,0	0/0:19,0:19:42.07:0,42,584	1/1:29,17:46:78.05:1156,78,0	1/1:16,0:17:11.08:112,11,0	0/0:22,0:25:54.14:0,54,802	0/0:29,0:29:55.39:0,55,920	0/0:21,0:21:41.97:0,42,630	0/0:18,0:18:48.14:0,48,727	0/0:14,0:15:23.93:0,24,349	0/0:22,0:22:36.06:0,36,500	0/0:17,0:18:32.99:0,33,531	0/0:24,0:24:54.13:0,54,789	1/1:11,0:12:11.89:137,12,0	1/1:13,5:19:18.09:323,18,0	0/1:13,11:27:72.13:331,0,72	1/1:6,11:20:3.01:74,3,0	0/0:20,0:20:36.12:0,36,581	0/0:22,0:22:36.11:0,36,569	0/0:21,0:21:44.73:0,45,701	0/0:16,0:15:30.10:0,30,493	1/1:23,2:24:32.82:560,33,0	1/1:11,19:30:15.94:336,16,0	1/1:11,0:12:8.76:121,9,0
chr10	99936930	.	C	CTG	670.46	PASS	AB=0.960;AC=7;AF=0.146;AN=48;BaseQRankSum=5.271;DP=583;FS=3.578;HRun=0;HaplotypeScore=120.6323;InbreedingCoeff=0.2442;MQ=53.89;MQ0=11;MQRankSum=0.444;QD=5.68;ReadPosRankSum=-0.105;VQSLOD=3.2262;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:38,1:40:20.55:526,21,0	./.	./.	./.	0/0:20,0:29:26.64:0,27,256	0/1:15,5:19:3.07:220,0,3	0/0:21,0:21:32.17:0,32,252	0/0:28,0:26:5.99:0,6,55	0/1:11,0:11:2.90:3,0,9	0/0:22,0:22:17.44:0,17,131	0/0:26,0:26:29.76:0,30,273	0/0:22,0:23:26.70:0,27,241	0/0:20,0:20:3.06:0,3,195	0/0:13,9:22:1.72:0,2,28	0/1:20,0:20:16.24:16,0,192	0/0:20,0:21:38.79:0,39,364	0/0:26,0:26:42.22:0,42,392	0/1:10,0:10:3.11:3,0,8	0/1:17,0:17:20.81:21,0,143	0/0:23,0:22:21.01:0,21,210	0/0:29,0:27:26.35:0,26,206	0/0:14,0:14:9.02:0,9,99	0/0:22,0:25:23.73:0,24,229	0/0:23,0:23:40.46:0,40,397	0/0:22,0:21:41.59:0,42,395	0/0:28,0:26:40.07:0,40,358	0/0:22,0:21:7.62:0,8,111	./.
chr10	99936959	.	TGTGTGTGTTG	T	213.68	PASS	AB=0.816;AC=2;AF=0.036;AN=56;BaseQRankSum=3.843;DP=591;FS=0.000;HRun=0;HaplotypeScore=171.2471;InbreedingCoeff=0.3307;MQ=55.39;MQ0=22;MQRankSum=-3.344;QD=7.91;ReadPosRankSum=-1.417;VQSLOD=2.3462;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:86.66:0,87,2665	0/0:1,0:1:3.01:0,3,132	0/0:32,0:9:20.14:0,20,480	0/0:36,0:10:24.05:0,24,384	0/0:24,0:24:57.64:0,58,1833	0/0:21,0:20:41.63:0,42,1250	0/0:21,0:20:48.64:0,49,1554	0/0:27,0:26:75.72:0,76,1541	0/1:15,0:15:0.73:109,0,1	0/0:13,0:13:36.11:0,36,1073	0/0:14,0:14:42.14:0,42,1571	0/0:24,0:24:48.16:0,48,1767	0/0:15,0:15:45.15:0,45,1501	0/0:20,0:19:24.55:0,25,518	0/0:29,0:29:75.26:0,75,2109	0/0:20,0:20:60.20:0,60,2336	0/0:25,0:24:66.21:0,66,2374	0/1:5,7:12:9.60:193,0,10	0/0:21,0:18:48.13:0,48,1265	0/0:18,0:17:33.58:0,34,1287	0/0:33,0:30:55.45:0,55,1969	0/0:8,0:7:18.05:0,18,558	0/0:19,0:19:42.14:0,42,1519	0/0:28,0:28:75.71:0,76,2595	0/0:25,0:24:66.90:0,67,2661	0/0:22,0:21:60.20:0,60,2393	0/0:19,0:18:29.42:0,29,838	0/0:6,0:5:9.03:0,9,138
chr10	99936961	.	TGTGTGTTG	T	165.95	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=4.209;DP=599;FS=1.286;HRun=0;HaplotypeScore=156.9136;InbreedingCoeff=0.5694;MQ=56.14;MQ0=20;MQRankSum=-3.791;QD=5.93;ReadPosRankSum=-1.545;VQSLOD=2.6277;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:90.65:0,91,2344	0/0:1,0:1:3.01:0,3,106	0/0:36,0:12:28.57:0,29,583	0/0:38,0:12:30.01:0,30,433	0/0:23,0:23:54.18:0,54,1546	0/0:21,0:20:40.94:0,41,1076	0/0:23,0:22:54.65:0,55,1311	0/0:27,0:26:75.72:0,76,1408	1/1:2,13:15:5.13:96,5,0	0/0:11,0:11:30.09:0,30,807	0/0:14,0:14:42.12:0,42,1284	0/0:24,0:24:48.16:0,48,1432	0/0:15,0:15:45.15:0,45,1284	0/0:20,0:19:23.96:0,24,441	0/0:30,0:30:78.27:0,78,1876	0/0:20,0:20:49.74:0,50,1898	0/0:24,0:23:63.21:0,63,1973	0/1:13,0:13:3.88:163,0,4	0/0:21,0:18:51.14:0,51,1129	0/0:18,0:17:36.12:0,36,1133	0/0:31,0:30:35.21:0,35,1612	0/0:7,0:6:15.04:0,15,441	0/0:19,0:19:42.14:0,42,1262	0/0:28,0:28:75.68:0,76,2181	0/0:24,0:23:63.89:0,64,2134	0/0:23,0:22:63.21:0,63,2031	0/0:22,0:21:37.98:0,38,822	0/0:6,0:5:9.03:0,9,138
chr10	99938216	.	CT	C	1549.75	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.855;DP=757;FS=0.000;HRun=1;HaplotypeScore=80.4094;InbreedingCoeff=0.9998;MQ=77.96;MQ0=0;MQRankSum=-1.755;QD=38.74;ReadPosRankSum=-0.122;VQSLOD=3.9001;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,2157	0/0:20,0:20:60.19:0,60,936	0/0:25,0:25:66.21:0,66,1017	0/0:21,0:21:33.63:0,34,770	0/0:30,0:30:90.31:0,90,1437	0/0:23,0:23:69.24:0,69,1103	0/0:30,0:30:90.31:0,90,1439	0/0:35,0:35:99:0,105,1575	1/1:0,23:23:69.23:964,69,0	0/0:41,0:41:99:0,117,1864	0/0:27,0:27:81.28:0,81,1292	0/0:15,0:15:42.14:0,42,669	0/0:25,0:25:75.26:0,75,1197	0/0:18,0:18:54.17:0,54,833	0/0:34,0:34:99:0,102,1631	0/0:27,1:28:42.34:0,42,1244	0/0:16,0:16:48.16:0,48,767	1/1:0,17:17:51.17:707,51,0	0/0:23,0:23:69.21:0,69,1050	0/0:26,0:26:75.24:0,75,1176	0/0:50,0:50:99:0,151,2375	0/0:26,0:26:78.27:0,78,1246	0/0:27,0:27:81.26:0,81,1271	0/0:37,0:37:99:0,108,1724	0/0:20,0:20:60.20:0,60,959	0/0:30,0:30:90.31:0,90,1431	0/0:26,0:25:78.27:0,78,1237	0/0:18,0:18:51.16:0,51,792
chr10	99938316	.	A	ATGT	1953.93	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.813;DP=758;FS=12.741;HRun=0;HaplotypeScore=107.6221;InbreedingCoeff=0.9999;MQ=86.68;MQ0=0;MQRankSum=-2.124;QD=41.57;ReadPosRankSum=2.305;VQSLOD=4.8147;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,107,1569	0/0:13,0:13:39.10:0,39,546	0/0:32,0:31:46.68:0,47,792	0/0:27,0:27:67.41:0,67,971	0/0:34,0:34:96.33:0,96,1500	0/0:20,0:20:57.17:0,57,847	0/0:26,0:26:66.21:0,66,1010	0/0:39,0:39:93.26:0,93,1335	1/1:6,22:29:56.64:1232,57,0	0/0:37,0:37:99:0,99,1492	0/0:22,0:22:60.20:0,60,913	0/0:36,0:36:87.20:0,87,1298	0/0:22,0:22:57.19:0,57,891	0/0:16,0:16:48.16:0,48,749	0/0:34,0:34:87.25:0,87,1276	0/0:23,0:23:63.19:0,63,924	0/0:28,0:28:81.24:0,81,1218	1/1:5,13:18:39.13:844,39,0	0/0:21,0:21:63.13:0,63,887	0/0:37,0:37:99:0,102,1574	0/0:14,0:14:39.13:0,39,610	0/0:26,0:26:75.20:0,75,1122	0/0:26,0:26:75.22:0,75,1128	0/0:31,0:31:84.28:0,84,1291	0/0:17,0:17:51.17:0,51,797	0/0:36,0:36:99:0,105,1624	0/0:35,0:34:75.25:0,75,1168	0/0:19,0:19:45.14:0,45,682
chr10	99938704	.	CTTTGAATCTTTTATTT	C	1584.89	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.805;DP=442;FS=0.000;HRun=0;HaplotypeScore=193.2415;InbreedingCoeff=0.8935;MQ=72.59;MQ0=0;MQRankSum=-5.169;QD=105.66;ReadPosRankSum=1.813;VQSLOD=3.5615;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.22:0,63,4113	0/0:7,0:7:21.07:0,21,1327	0/0:10,0:10:30.10:0,30,1532	0/0:10,0:10:16.16:0,16,880	0/0:18,0:18:54.19:0,54,3807	1/1:1,14:15:36.12:1680,36,0	0/0:10,0:10:27.07:0,27,1754	0/0:40,0:40:99:0,111,7190	0/0:10,0:10:27.09:0,27,1853	0/0:28,0:28:81.28:0,81,5705	0/0:12,0:12:36.12:0,36,2369	0/0:13,0:13:39.13:0,39,2664	0/0:16,0:16:48.15:0,48,3153	0/0:8,0:8:24.08:0,24,1696	0/0:16,0:16:48.15:0,48,3036	0/0:12,0:12:36.12:0,36,2497	0/0:27,0:27:75.26:0,75,5704	0/0:20,0:20:54.19:0,54,3710	0/0:27,0:27:69.24:0,69,4605	0/0:27,0:27:78.27:0,78,5368	0/0:6,0:6:18.06:0,18,1422	0/0:4,0:4:12.04:0,12,948	0/0:12,0:12:33.11:0,33,2216	0/0:3,0:3:9.03:0,9,558	0/0:17,0:17:48.16:0,48,3652	0/0:24,0:24:72.20:0,72,4930	0/0:18,0:18:51.18:0,51,3510	0/0:11,0:11:30.10:0,30,1976
chr10	99938754	.	AT	A	2380.29	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=5.192;DP=407;FS=0.906;HRun=10;HaplotypeScore=57.2145;InbreedingCoeff=0.8622;MQ=74.50;MQ0=1;MQRankSum=2.748;QD=16.30;ReadPosRankSum=0.764;VQSLOD=3.8634;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,14:19:38.96:339,39,0	0/0:6,0:6:15.04:0,15,165	0/0:14,0:10:9.59:0,10,134	0/0:10,0:9:17.31:0,17,190	0/0:27,1:28:49.13:0,49,761	0/0:22,0:22:53.99:0,54,544	0/1:9,0:9:0.83:1,0,178	1/1:5,18:23:53.96:463,54,0	0/0:5,0:12:32.38:0,32,215	0/0:32,0:32:84.20:0,84,904	0/0:14,1:15:19.05:0,19,430	0/0:13,0:13:33.07:0,33,354	0/1:13,0:13:1.90:2,0,208	0/0:14,0:14:39.09:0,39,423	0/0:16,0:16:42.10:0,42,455	0/0:9,0:9:21.06:0,21,232	0/0:21,2:23:34.01:0,34,574	0/0:5,0:11:8.76:0,9,53	1/1:5,16:20:46.75:383,47,0	1/1:0,15:15:44.99:391,45,0	1/1:1,5:6:15:130,15,0	0/0:7,0:7:15.04:0,15,166	0/0:14,0:14:36.05:0,36,376	0/0:5,0:5:14.99:0,15,152	0/0:10,0:10:24.05:0,24,257	1/1:1,19:20:53.92:457,54,0	1/1:1,15:16:38.99:338,39,0	1/1:1,3:4:9:78,9,0
chr10	99938770	.	ATTCCT	A	630.89	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.455;DP=392;FS=3.741;HRun=0;HaplotypeScore=90.3376;InbreedingCoeff=0.9624;MQ=75.28;MQ0=0;MQRankSum=-6.632;QD=42.06;ReadPosRankSum=1.715;VQSLOD=3.2440;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.15:0,45,1492	0/0:7,0:7:21.07:0,21,696	0/0:16,0:14:28.60:0,29,636	0/0:6,0:5:12.01:0,12,302	0/0:29,0:29:87.30:0,87,2850	0/0:20,0:20:54.19:0,54,1737	0/0:7,0:7:21.07:0,21,699	0/0:23,0:23:66.21:0,66,1981	1/1:0,10:10:30.10:500,30,0	0/0:34,0:34:99:0,102,3412	0/0:15,0:15:45.15:0,45,1499	0/0:13,0:13:39.13:0,39,1299	0/0:10,0:10:27.09:0,27,899	0/0:13,0:13:39.13:0,39,1268	0/0:14,0:14:42.14:0,42,1399	0/0:8,0:8:24.08:0,24,714	0/0:24,0:24:72.25:0,72,2237	1/1:0,5:5:15.05:249,15,0	0/0:13,0:13:39.13:0,39,1221	0/0:16,0:16:48.15:0,48,1518	0/0:7,0:7:21.05:0,21,623	0/0:7,0:7:21.07:0,21,700	0/0:13,0:13:36.12:0,36,1201	0/0:8,0:8:24.08:0,24,794	0/0:10,0:10:30.10:0,30,1000	0/0:22,0:22:66.23:0,66,2160	0/0:17,0:17:45.15:0,45,1487	0/0:7,0:7:21.07:0,21,699
chr10	99938776	.	AGG	A	317.19	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.324;DP=397;FS=3.669;HRun=2;HaplotypeScore=64.9312;InbreedingCoeff=0.9306;MQ=71.92;MQ0=0;MQRankSum=-6.278;QD=19.82;ReadPosRankSum=1.462;VQSLOD=1.6341;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.17:0,57,1061	0/0:8,0:8:24.08:0,24,487	0/0:11,0:10:26.56:0,27,372	0/0:5,0:4:6.02:0,6,122	0/0:30,0:30:90.31:0,90,1808	0/0:22,0:22:60.21:0,60,1218	0/0:9,0:9:27.09:0,27,538	0/0:19,0:19:54.18:0,54,1055	1/1:1,10:11:33.01:295,33,0	0/0:34,0:34:99:0,102,1997	0/0:16,0:16:48.16:0,48,975	0/0:13,0:13:39.13:0,39,792	0/0:10,0:10:27.09:0,27,548	0/0:12,0:12:36.11:0,36,695	0/0:14,0:14:42.14:0,42,853	0/0:8,0:8:24.02:0,24,375	0/0:23,0:23:69.24:0,69,1387	1/1:0,5:5:15.02:141,15,0	0/0:11,0:11:33.11:0,33,656	0/0:16,0:16:48.16:0,48,964	0/0:8,0:8:24.08:0,24,488	0/0:7,0:7:21.07:0,21,427	0/0:13,0:13:33.11:0,33,667	0/0:8,0:8:24.07:0,24,451	0/0:13,0:13:36.12:0,36,723	0/0:24,0:24:72.25:0,72,1455	0/0:18,0:18:48.16:0,48,961	0/0:7,0:7:21.07:0,21,399
chr10	99938853	.	TA	T	503.99	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.543;DP=382;FS=5.279;HRun=10;HaplotypeScore=41.0998;InbreedingCoeff=0.7399;MQ=73.51;MQ0=3;MQRankSum=-1.246;QD=17.38;ReadPosRankSum=3.121;VQSLOD=4.0295;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:68.99:599,69,0	0/0:6,0:6:14.98:0,15,142	0/0:24,0:12:32.77:0,33,310	0/0:13,0:7:14.57:0,15,94	0/0:26,0:26:66.08:0,66,659	0/0:22,0:22:56.22:0,56,311	0/0:6,0:6:15.04:0,15,165	0/0:17,0:17:38.68:0,39,400	0/0:4,0:4:6.02:0,6,66	0/0:21,0:21:42.11:0,42,459	0/0:19,1:20:28.07:0,28,521	0/0:7,0:7:15.02:0,15,156	0/0:10,0:10:27.06:0,27,290	0/0:5,0:5:15.04:0,15,166	0/0:14,0:14:38.96:0,39,404	0/0:12,0:12:34.58:0,35,339	0/0:23,0:23:57.09:0,57,615	0/0:14,1:15:19.10:0,19,438	0/0:13,0:13:33.08:0,33,352	0/0:10,0:10:30.07:0,30,325	0/0:7,0:7:14.99:0,15,145	0/0:4,0:4:9.02:0,9,100	0/0:6,0:6:15.04:0,15,166	0/0:6,0:6:9.02:0,9,100	0/0:14,0:14:39.09:0,39,416	0/0:21,0:21:54.13:0,54,584	0/0:13,0:13:33.09:0,33,362	0/0:14,0:14:42.11:0,42,464
chr10	99939232	.	T	TCCCCTC	2080.72	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.964;DP=665;FS=0.000;HRun=0;HaplotypeScore=134.5621;InbreedingCoeff=0.9942;MQ=87.81;MQ0=0;MQRankSum=-7.753;QD=63.05;ReadPosRankSum=2.003;VQSLOD=3.7927;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:57:99:0,165,3595	0/0:11,0:11:24.05:0,24,481	0/0:25,0:25:60.14:0,60,1188	0/0:26,0:26:68.59:0,69,1438	0/0:30,0:30:72.15:0,72,1601	0/0:19,0:19:57.18:0,57,1291	0/0:14,0:14:36.12:0,36,841	0/0:26,0:25:72.21:0,72,1455	1/1:5,13:21:45.15:1565,45,0	0/0:32,0:32:93.30:0,93,2085	0/0:10,0:10:30.10:0,30,720	0/0:29,0:29:84.27:0,84,1927	0/0:23,0:23:63.18:0,63,1309	0/0:16,0:16:42.14:0,42,985	0/0:28,0:28:78.23:0,78,1736	0/0:21,0:21:57.10:0,57,1174	0/0:40,0:40:99:0,114,2606	1/1:1,8:12:18.06:635,18,0	0/0:19,0:19:57.18:0,57,1242	0/0:16,0:16:48.16:0,48,1109	0/0:45,0:45:99:0,129,3009	0/0:18,0:18:51.11:0,51,1063	0/0:19,0:19:51.18:0,51,1205	0/0:30,0:31:87.28:0,87,1965	0/0:26,0:26:72.18:0,72,1541	0/0:21,0:21:60.19:0,60,1354	0/0:20,0:19:51.17:0,51,1225	0/0:10,0:10:30.06:0,30,623
chr10	99939437	.	GGT	G	412.12	PASS	AB=0.947;AC=21;AF=0.438;AN=48;BaseQRankSum=4.651;DP=602;FS=8.151;HRun=0;HaplotypeScore=91.3469;InbreedingCoeff=0.0534;MQ=67.26;MQ0=7;MQRankSum=-0.275;QD=1.13;ReadPosRankSum=4.018;VQSLOD=0.8458;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:41:5.68:28,6,0	./.	0/0:37,0:27:0:0,0,0	./.	1/1:19,4:23:6.01:64,6,0	1/1:10,0:10:3:25,3,0	1/1:22,3:26:8.85:78,9,0	0/0:26,0:25:0:0,0,0	0/1:17,0:17:0:0,0,0	0/1:24,0:23:15.99:25,0,16	0/0:8,0:8:3.01:0,3,44	0/0:24,0:24:15.02:0,15,180	0/1:24,1:26:10.99:11,0,160	0/0:13,0:13:3.01:0,3,44	0/1:24,1:25:25.97:26,0,36	1/1:13,5:18:12.03:128,12,0	0/1:16,4:20:14.90:55,0,15	1/1:23,0:23:8.52:42,9,0	0/0:17,0:17:2.92:0,3,17	./.	0/1:44,0:44:19.97:20,0,63	0/1:20,1:21:16.99:17,0,117	0/1:20,1:21:16.98:17,0,100	0/0:28,0:28:8.98:0,9,89	0/0:16,0:16:18.02:0,18,206	0/0:18,0:18:3:0,3,28	0/1:21,0:24:19.19:19,0,35	./.
chr10	99939481	.	TGTGTGTG	T	475.54	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.623;DP=553;FS=2.255;HRun=0;HaplotypeScore=117.4810;InbreedingCoeff=0.8847;MQ=61.72;MQ0=19;MQRankSum=-4.791;QD=13.59;ReadPosRankSum=1.440;VQSLOD=2.8025;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:46.49:0,46,859	0/0:14,0:14:36.12:0,36,761	0/0:20,0:13:39.13:0,39,527	0/0:23,0:16:45.14:0,45,579	0/0:23,0:22:51.14:0,51,791	0/0:19,0:19:44.64:0,45,734	0/0:26,0:26:60.20:0,60,943	0/0:13,0:13:36.09:0,36,466	1/1:13,0:8:3.01:51,3,0	0/0:26,0:26:69.70:0,70,1354	0/0:12,0:12:30.10:0,30,527	0/0:24,0:23:51.14:0,51,1178	0/0:26,0:25:61.76:0,62,1418	0/0:11,0:11:27.09:0,27,509	0/0:20,0:19:54.14:0,54,851	0/0:15,0:15:36.59:0,37,652	0/0:14,0:14:30.99:0,31,528	1/1:18,4:13:27.78:533,28,0	0/0:19,0:18:54.17:0,54,809	0/0:14,0:14:30.01:0,30,410	0/0:36,0:36:87.26:0,87,1483	0/0:29,0:29:78.25:0,78,1499	0/0:16,0:16:30.10:0,30,803	0/0:29,0:29:66.20:0,66,1303	0/0:14,0:14:33.58:0,34,947	0/0:19,0:19:54.17:0,54,793	0/0:17,0:17:33.05:0,33,496	0/0:5,0:4:12.04:0,12,222
chr10	99939487	.	TG	T	382.94	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=4.166;DP=500;FS=6.104;HRun=1;HaplotypeScore=56.0555;InbreedingCoeff=0.9633;MQ=67.56;MQ0=18;MQRankSum=-4.009;QD=14.18;ReadPosRankSum=0.215;VQSLOD=2.6472;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:77.23:0,77,989	0/0:11,0:11:30.07:0,30,386	0/0:24,0:17:48.15:0,48,633	0/0:25,0:18:48.14:0,48,607	0/0:17,0:17:44.31:0,44,532	0/0:21,0:21:61.08:0,61,812	0/0:20,0:20:52.93:0,53,625	0/0:17,0:17:48.11:0,48,603	./.	0/0:22,0:22:58.57:0,59,753	0/0:12,0:12:33.11:0,33,453	0/0:22,0:21:50.93:0,51,680	0/0:17,0:17:47.72:0,48,619	0/0:9,0:9:27.09:0,27,372	0/0:18,0:17:50.74:0,51,651	0/0:11,0:11:25.44:0,25,243	0/0:15,0:15:35.29:0,35,433	1/1:13,14:17:39.06:477,39,0	0/0:19,0:18:54.14:0,54,692	0/0:10,0:10:27.08:0,27,365	0/0:31,0:31:80.84:0,81,1071	0/0:24,0:24:65.81:0,66,888	0/0:13,0:13:32.68:0,33,427	0/0:24,0:24:51.17:0,51,703	0/0:14,0:14:36.11:0,36,507	0/0:18,0:18:54.17:0,54,722	0/0:10,0:10:23.25:0,23,270	0/0:5,0:4:12.04:0,12,162
chr10	99939488	.	G	GT	341.35	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=4.121;DP=496;FS=6.165;HRun=1;HaplotypeScore=57.1097;InbreedingCoeff=0.9640;MQ=68.00;MQ0=18;MQRankSum=-4.544;QD=13.65;ReadPosRankSum=0.019;VQSLOD=2.3977;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:78.22:0,78,1023	0/0:11,0:11:30.07:0,30,387	0/0:24,0:17:48.15:0,48,637	0/0:25,0:18:48.14:0,48,612	0/0:18,0:18:45.10:0,45,562	0/0:20,0:20:60.20:0,60,814	0/0:20,0:20:54.13:0,54,681	0/0:17,0:17:48.11:0,48,605	./.	0/0:22,0:22:57.16:0,57,757	0/0:12,0:12:33.11:0,33,445	0/0:22,0:21:47.93:0,48,639	0/0:16,0:16:43.68:0,44,559	0/0:9,0:9:27.09:0,27,368	0/0:18,0:17:51.14:0,51,662	0/0:12,0:12:27.02:0,27,300	0/0:16,0:16:36.09:0,36,456	1/1:20,5:15:37.59:436,38,0	0/0:20,0:19:54.14:0,54,698	0/0:10,0:10:27.04:0,27,367	0/0:30,0:30:81.24:0,81,1069	0/0:24,0:24:66.19:0,66,865	0/0:13,0:13:33.06:0,33,401	0/0:21,0:21:51.15:0,51,678	0/0:14,0:14:33.34:0,33,451	0/0:18,0:18:54.17:0,54,719	0/0:9,0:9:24.05:0,24,293	0/0:5,0:4:12.04:0,12,163
chr10	99939636	.	C	CT	1425.94	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.100;DP=659;FS=7.593;HRun=2;HaplotypeScore=67.7754;InbreedingCoeff=0.9989;MQ=90.90;MQ0=0;MQRankSum=-1.329;QD=33.95;ReadPosRankSum=1.543;VQSLOD=3.6914;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1404	0/0:14,0:14:42.13:0,42,521	0/0:32,0:32:60.60:0,61,818	0/0:21,0:21:59.71:0,60,650	0/0:19,0:19:54.17:0,54,669	0/0:25,0:25:75.22:0,75,916	0/0:19,0:19:57.17:0,57,694	0/0:34,0:34:93.15:0,93,1121	1/1:2,18:19:48.16:688,48,0	0/0:35,0:35:93.28:0,93,1134	0/0:19,0:19:54.16:0,54,660	0/0:27,0:27:75.22:0,75,917	0/0:22,0:22:60.18:0,60,731	0/0:15,0:15:42:0,42,494	0/0:25,0:25:69.22:0,69,855	0/0:18,0:18:51.16:0,51,632	0/0:33,0:33:93.27:0,93,1138	1/1:1,21:22:60.20:860,60,0	0/0:19,0:19:51.15:0,51,613	0/0:22,0:22:66.19:0,66,806	0/0:17,0:17:48.15:0,48,595	0/0:20,0:20:51.16:0,51,632	0/0:22,0:22:63.20:0,63,780	0/0:27,0:27:81.25:0,81,1003	0/0:19,0:19:57.18:0,57,707	0/0:35,0:35:99:0,105,1302	0/0:30,0:30:78.24:0,78,967	0/0:8,0:8:24.08:0,24,298
chr10	99940443	.	CGGGGGG	C	908.77	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.734;DP=360;FS=1.285;HRun=13;HaplotypeScore=75.2636;InbreedingCoeff=0.5660;MQ=84.35;MQ0=2;MQRankSum=-5.821;QD=28.40;ReadPosRankSum=4.645;VQSLOD=1.6805;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:6.02:0,6,198	0/0:5,0:5:3.01:0,3,80	0/0:17,0:13:19.05:0,19,433	0/0:25,0:23:37.74:0,38,742	0/0:9,0:9:18.06:0,18,459	0/0:11,0:11:12.01:0,12,278	0/0:28,0:28:43.64:0,44,1115	0/0:4,0:5:3.46:0,3,45	1/1:3,14:17:30.05:558,30,0	0/0:11,0:11:12.04:0,12,218	0/0:2,0:2:6.02:0,6,176	0/0:10,0:16:9.02:0,9,202	0/0:17,0:17:24.06:0,24,556	0/0:13,0:13:17.80:0,18,521	0/0:12,0:12:12.04:0,12,373	0/0:18,0:18:21.06:0,21,508	0/0:21,0:26:16.99:0,17,507	1/1:2,13:15:24.07:470,24,0	0/0:7,0:7:3.01:0,3,49	0/0:6,0:7:6.02:0,6,183	0/0:20,0:20:24.03:0,24,499	0/0:8,0:8:14.32:0,14,289	0/0:6,0:6:9.03:0,9,230	0/0:24,0:24:33.57:0,34,852	0/0:12,0:12:17.24:0,17,527	0/0:9,0:9:9.02:0,9,199	0/0:10,0:10:12.02:0,12,233	0/0:4,0:4:6.02:0,6,179
chr10	99940572	.	T	TAGAAGCCTG	1446.67	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.845;DP=541;FS=5.842;HRun=0;HaplotypeScore=144.9898;InbreedingCoeff=0.9883;MQ=92.17;MQ0=0;MQRankSum=-5.116;QD=65.76;ReadPosRankSum=-0.549;VQSLOD=3.3123;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,2939	0/0:9,0:9:27.08:0,27,712	0/0:23,0:23:48.14:0,48,1355	0/0:25,0:24:54.46:0,54,1409	0/0:25,0:25:69.22:0,69,1999	0/0:16,0:16:45.15:0,45,1364	0/0:21,0:21:60.19:0,60,1720	0/0:24,0:24:60.19:0,60,1612	1/1:5,4:12:21.07:871,21,0	0/0:19,0:19:57.19:0,57,1664	0/0:20,0:20:60.21:0,60,1788	0/0:16,0:16:42.14:0,42,1242	0/0:19,0:19:54.18:0,54,1555	0/0:20,0:20:54.12:0,54,1525	0/0:26,0:26:72.23:0,72,2035	0/0:12,0:12:33.11:0,33,1000	0/0:29,0:29:84.27:0,84,2385	1/1:5,5:10:15.05:693,15,0	0/0:19,0:19:57.19:0,57,1533	0/0:11,0:11:33.11:0,33,904	0/0:23,0:23:63.22:0,63,1782	0/0:19,0:19:54.16:0,54,1466	0/0:14,0:14:42.14:0,42,1238	0/0:25,0:25:72.25:0,72,2137	0/0:20,0:20:57.20:0,57,1728	0/0:25,0:25:72.24:0,72,2057	0/0:16,0:16:45.14:0,45,1257	0/0:9,0:9:27.09:0,27,818
chr10	99944519	.	G	GA	826.04	PASS	AB=0.822;AC=15;AF=0.268;AN=56;BaseQRankSum=0.165;DP=616;FS=9.340;HRun=15;HaplotypeScore=85.8083;InbreedingCoeff=0.3859;MQ=52.19;MQ0=11;MQRankSum=-3.654;QD=3.91;ReadPosRankSum=-2.752;VQSLOD=0.0021;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,2:55:6.90:0,7,445	0/0:8,0:7:14.34:0,14,81	0/0:11,0:3:5.81:0,6,33	0/0:10,0:7:3.03:0,3,41	0/0:30,0:31:43.67:0,44,247	1/1:17,1:19:6.77:66,7,0	0/0:25,0:26:38.45:0,38,220	1/1:27,5:32:19.62:189,20,0	0/0:16,0:20:27.46:0,27,104	0/0:24,0:24:15.77:0,16,181	0/1:20,2:22:19.31:19,0,165	0/0:25,0:26:7.54:0,8,167	0/0:10,0:10:20.46:0,20,112	0/0:16,0:16:29.32:0,29,147	0/1:17,0:17:13.13:13,0,98	0/0:13,0:13:20.31:0,20,119	0/0:32,0:34:31.47:0,31,280	0/0:11,0:31:33.01:0,33,126	1/1:21,3:23:27.08:270,27,0	1/1:16,3:18:4.81:140,5,0	1/1:8,9:17:2.77:24,3,0	0/0:16,0:17:10.86:0,11,112	0/0:19,0:19:29.02:0,29,160	0/0:27,1:29:14.34:0,14,281	0/0:18,3:22:5.99:0,6,136	0/1:24,2:26:11.22:189,0,11	0/1:12,11:22:19.10:61,0,19	0/1:3,1:8:21.51:23,0,22
chr10	99945003	.	C	CA	2737.28	PASS	AB=0.866;AC=23;AF=0.411;AN=56;BaseQRankSum=-2.554;DP=465;FS=23.034;HRun=10;HaplotypeScore=59.2169;InbreedingCoeff=0.6869;MQ=72.80;MQ0=2;MQRankSum=-1.761;QD=12.17;ReadPosRankSum=-0.602;VQSLOD=1.1630;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,1:18:7.66:37,8,0	0/0:4,0:4:5.99:0,6,49	0/0:15,0:14:20.46:0,20,151	0/1:9,0:8:13.02:13,0,17	0/0:22,0:22:50.51:0,51,418	1/1:1,0:21:34.56:171,35,0	0/0:14,0:14:38.94:0,39,320	1/1:9,20:30:53.71:558,54,0	1/1:4,0:11:5.68:28,6,0	0/0:25,0:25:53.89:0,54,443	0/0:15,0:15:41.95:0,42,345	0/0:13,0:13:20.92:0,21,172	0/0:10,0:10:14.95:0,15,123	0/0:15,1:16:3.60:0,4,195	0/1:12,2:14:43.03:43,0,102	0/0:12,0:12:32.95:0,33,271	0/0:30,0:30:63.85:0,64,602	1/1:7,1:25:34.43:191,34,0	1/1:4,16:20:26.46:477,26,0	1/1:7,12:19:5.36:240,5,0	1/1:2,11:13:27.07:288,27,0	0/0:15,0:15:35.93:0,36,296	0/0:12,0:12:29.96:0,30,246	0/0:19,0:19:38.94:0,39,320	0/0:15,2:16:6.92:0,7,258	0/1:8,5:13:49.88:136,0,50	1/1:2,16:18:39.09:409,39,0	1/1:4,8:12:35.80:354,36,0
chr10	99945369	.	A	AG	3883.56	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-8.916;DP=572;FS=0.415;HRun=7;HaplotypeScore=65.0600;InbreedingCoeff=0.9804;MQ=62.76;MQ0=2;MQRankSum=-1.694;QD=22.71;ReadPosRankSum=-1.144;VQSLOD=3.1764;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:82.76:0,83,612	0/0:8,0:8:21.03:0,21,203	0/0:20,0:13:31.56:0,32,279	0/0:22,0:17:36.66:0,37,322	0/0:31,0:31:67.29:0,67,809	0/0:23,0:23:61.76:0,62,444	0/0:28,0:28:72.06:0,72,680	1/1:8,16:24:36.07:409,36,0	1/1:20,0:20:34.66:193,35,0	0/0:15,0:15:36.52:0,37,346	0/0:24,0:24:69.10:0,69,661	0/0:17,0:17:48.07:0,48,463	0/0:31,0:31:81.12:0,81,782	0/0:15,0:15:39.06:0,39,377	0/0:25,0:25:72.10:0,72,686	0/0:20,0:20:56.99:0,57,537	0/0:28,0:28:72.11:0,72,695	1/1:12,0:13:5.81:34,6,0	1/1:2,16:18:45.10:528,45,0	1/1:2,6:8:17.99:199,18,0	1/1:1,18:19:48.15:578,48,0	0/0:9,0:9:24.02:0,24,225	0/0:13,0:13:36.05:0,36,342	0/0:19,0:19:48.08:0,48,464	0/0:14,0:13:30.01:0,30,279	1/1:1,17:18:48.14:568,48,0	1/1:1,27:28:66.07:797,66,0	1/1:1,22:23:48.15:577,48,0
chr10	99945376	.	G	GCAGA	2774.93	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-3.516;DP=592;FS=2.098;HRun=0;HaplotypeScore=106.7463;InbreedingCoeff=0.9545;MQ=63.60;MQ0=2;MQRankSum=-3.964;QD=25.69;ReadPosRankSum=0.555;VQSLOD=3.3285;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,31:48:48.16:1134,48,0	0/0:8,0:8:21.07:0,21,340	0/0:24,0:16:12.04:0,12,189	0/0:25,0:21:26.46:0,26,373	0/0:31,0:31:51.16:0,51,803	1/1:8,14:22:39.13:942,39,0	0/0:28,0:28:66.20:0,66,1042	0/0:21,0:21:36.09:0,36,497	1/1:1,0:21:33.11:664,33,0	0/0:13,0:13:15.05:0,15,243	0/0:24,0:24:39.12:0,39,608	0/0:18,0:18:33.11:0,33,530	0/0:30,0:30:57.18:0,57,900	0/0:16,0:16:33.11:0,33,535	0/0:24,0:24:60.20:0,60,969	0/0:20,0:21:51.14:0,51,755	0/0:27,0:27:48.12:0,48,753	1/1:4,0:16:9.03:191,9,0	0/0:17,0:17:24.07:0,24,309	0/0:8,0:8:12.04:0,12,170	0/0:20,0:20:45.13:0,45,566	0/0:8,0:8:21.07:0,21,340	0/0:13,0:13:15.02:0,15,215	0/0:23,0:23:54.13:0,54,797	0/0:14,0:13:39.13:0,39,632	0/0:18,0:18:36.11:0,36,489	0/0:31,0:31:48.57:0,49,572	0/0:22,0:22:29.40:0,29,380
chr10	99945687	.	GT	G	1891.51	PASS	AB=0.858;AC=20;AF=0.357;AN=56;BaseQRankSum=7.795;DP=466;FS=0.419;HRun=13;HaplotypeScore=51.8785;InbreedingCoeff=0.5160;MQ=69.61;MQ0=0;MQRankSum=1.376;QD=8.64;ReadPosRankSum=1.571;VQSLOD=2.3413;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,10:17:40.85:165,0,41	0/0:3,0:3:9.01:0,9,88	0/1:7,0:5:0.92:1,0,17	0/0:8,0:8:7.86:0,8,74	0/0:30,0:32:68.78:0,69,641	0/1:14,2:17:2.08:2,0,279	0/1:6,1:7:4.05:4,0,113	1/1:15,13:28:6.50:211,6,0	0/0:12,0:12:27.04:0,27,263	0/1:16,2:19:9.01:9,0,228	0/0:27,1:33:55.68:0,56,636	0/0:9,0:10:23.86:0,24,214	0/0:12,0:13:38.90:0,39,365	0/0:8,0:11:26.70:0,27,224	0/0:13,0:14:32.78:0,33,288	0/0:13,0:14:38.92:0,39,360	0/0:25,1:26:38.16:0,38,522	0/1:11,2:13:7.77:8,0,249	1/1:4,9:13:0.63:166,1,0	1/1:4,23:27:59.47:432,59,0	1/1:1,5:7:16.95:115,17,0	0/0:15,2:17:1.18:0,1,313	0/0:25,2:28:45.22:0,45,554	0/0:5,0:6:14.86:0,15,131	0/0:17,0:18:20.05:0,20,339	1/1:5,22:27:26.70:348,27,0	1/1:4,17:20:41.69:306,42,0	1/1:0,16:16:41.73:306,42,0
chr10	99947759	.	AC	A	6343.10	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.368;DP=635;FS=8.633;HRun=1;HaplotypeScore=62.1302;InbreedingCoeff=0.9998;MQ=76.67;MQ0=0;MQRankSum=-0.814;QD=40.66;ReadPosRankSum=1.016;VQSLOD=5.1263;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1694	0/0:13,0:13:39.10:0,39,576	0/0:24,0:24:69.21:0,69,1075	0/0:27,0:27:81.27:0,81,1256	0/0:25,0:25:75.20:0,75,1125	0/0:28,0:28:84.29:0,84,1338	0/0:19,0:19:57.19:0,57,909	1/1:0,25:25:75.24:1031,75,0	0/0:25,0:25:75.12:0,75,1162	0/0:29,0:29:84.28:0,84,1319	0/0:16,0:16:48.16:0,48,750	0/0:22,0:22:66.21:0,66,1024	0/0:20,0:20:60.19:0,60,933	0/0:19,0:19:57.19:0,57,906	0/0:23,0:23:63.20:0,63,978	0/0:25,0:25:75.24:0,75,1171	0/0:21,0:21:63.19:0,63,973	0/0:9,0:9:27.06:0,27,405	1/1:0,19:19:57.14:745,57,0	1/1:0,29:29:87.29:1215,87,0	1/1:0,27:27:75.25:1048,75,0	0/0:23,0:23:69.22:0,69,1075	0/0:24,0:24:69.24:0,69,1101	0/0:31,0:31:93.29:0,93,1457	0/0:19,0:19:57.16:0,57,861	1/1:0,20:20:60.20:837,60,0	1/1:0,19:19:57.19:797,57,0	1/1:0,17:17:48.16:670,48,0
chr10	99948577	.	GA	G	666.45	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.659;DP=603;FS=10.026;HRun=9;HaplotypeScore=57.4471;InbreedingCoeff=0.9690;MQ=80.24;MQ0=0;MQRankSum=-1.864;QD=22.21;ReadPosRankSum=-0.607;VQSLOD=3.8523;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:68.99:0,69,774	0/0:14,0:14:33.10:0,33,381	0/0:16,0:15:39.02:0,39,421	0/0:19,0:20:40.50:0,40,483	0/0:27,0:27:63.18:0,63,716	0/0:23,0:23:60.18:0,60,692	0/0:19,0:19:48.14:0,48,554	0/0:30,0:30:75.20:0,75,849	1/1:1,13:14:39.02:357,39,0	0/0:26,0:26:72.21:0,72,823	0/0:23,0:23:57.17:0,57,658	0/0:19,0:19:48.10:0,48,524	0/0:20,0:21:59.97:0,60,657	0/0:26,0:26:66.20:0,66,762	0/0:31,0:31:87.26:0,87,1004	0/0:16,0:16:42.12:0,42,485	0/0:24,0:24:66.17:0,66,742	1/1:0,16:16:47.98:431,48,0	0/0:22,1:23:26.68:0,27,553	0/0:37,0:37:99:0,102,1177	0/0:17,0:17:51.14:0,51,580	0/0:26,0:26:72.21:0,72,831	0/0:19,1:20:54.16:0,54,622	0/0:9,0:9:24.07:0,24,277	0/0:19,0:19:51.15:0,51,589	0/0:34,0:34:90.26:0,90,1031	0/0:21,0:21:63.15:0,63,704	0/0:4,0:4:9.03:0,9,104
chr10	99949613	.	ATGTGTGTATGTG	A	641.97	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.706;DP=1120;FS=5.767;HRun=0;HaplotypeScore=374.6380;InbreedingCoeff=0.9994;MQ=57.17;MQ0=19;MQRankSum=-1.629;QD=22.14;ReadPosRankSum=-2.160;VQSLOD=1.2048;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,8:29:33.06:737,33,0	0/0:18,0:18:48.15:0,48,1927	0/0:39,0:25:39.12:0,39,750	0/0:38,0:28:38.91:0,39,769	0/0:45,0:45:99:0,108,4575	0/0:32,0:32:75.24:0,75,3410	0/0:34,0:34:75.20:0,75,2509	0/0:54,0:46:96.29:0,96,2467	0/0:55,0:55:99:0,120,5378	0/0:57,0:56:99:0,150,6336	0/0:20,0:20:45.15:0,45,2114	0/0:43,0:44:97.40:0,97,4403	0/0:42,0:42:99:0,108,4657	0/0:49,0:49:99:0,113,5244	0/0:60,0:60:99:0,163,7158	0/0:58,0:56:99:0,144,6415	0/0:30,0:30:68.78:0,69,2471	0/0:32,0:32:67.90:0,68,2842	0/0:21,0:15:36.06:0,36,1318	0/0:35,0:36:78.14:0,78,3603	0/0:74,0:71:99:0,158,5940	0/0:44,0:44:99:0,111,4937	0/0:23,0:23:60.21:0,60,2997	0/0:62,0:61:99:0,147,6821	0/0:30,0:30:87.26:0,87,3990	0/0:46,0:44:99:0,105,4604	0/0:30,0:30:60.04:0,60,2245	0/0:18,0:18:39.02:0,39,1473
chr10	99949772	.	A	ATATGTGTG	7146.06	PASS	AB=0.632;AC=18;AF=0.321;AN=56;BaseQRankSum=1.592;DP=1129;FS=0.000;HRun=0;HaplotypeScore=292.1163;InbreedingCoeff=0.7816;MQ=48.92;MQ0=36;MQRankSum=-10.573;QD=17.30;ReadPosRankSum=-6.615;VQSLOD=2.3056;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:20,3:22:5.69:55,6,0	0/0:11,0:11:21.04:0,21,440	0/0:57,0:13:21.05:0,21,408	0/0:69,0:19:32.53:0,33,391	0/0:26,0:26:63.10:0,63,1312	1/1:7,27:36:5.98:47,6,0	0/0:33,0:32:72.69:0,73,1574	1/1:88,0:74:78.34:1565,78,0	0/0:14,33:50:3:0,3,25	0/0:46,0:45:93.30:0,93,2131	0/0:20,0:20:54.14:0,54,1151	0/0:42,0:42:99:0,102,2392	0/0:42,0:42:99:0,102,2410	0/0:43,0:43:99:0,111,2398	0/0:54,0:53:99:0,141,3199	0/0:47,0:46:99:0,108,2583	0/0:44,0:43:85.10:0,85,1676	0/1:11,23:36:6.25:243,0,6	1/1:21,2:15:35.96:746,36,0	1/1:26,9:34:15.05:301,15,0	1/1:51,4:55:26.70:336,27,0	0/0:25,0:25:60.16:0,60,1314	0/0:20,0:20:51.14:0,51,1188	0/0:59,0:59:99:0,125,3070	0/0:27,0:27:60.19:0,60,1325	0/1:31,29:56:82.86:2093,0,83	1/1:20,21:44:39.11:1238,39,0	1/1:8,5:13:11.51:522,12,0
chr10	99949826	.	ATGTG	A	4936.37	PASS	AB=0.774;AC=13;AF=0.232;AN=56;BaseQRankSum=10.690;DP=996;FS=0.000;HRun=0;HaplotypeScore=187.8134;InbreedingCoeff=0.6709;MQ=50.23;MQ0=30;MQRankSum=-0.621;QD=18.28;ReadPosRankSum=-1.522;VQSLOD=4.1925;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:29:21.30:0,21,300	0/0:7,0:7:15.05:0,15,358	0/0:50,0:18:42.13:0,42,849	0/0:92,0:23:51.12:0,51,935	0/0:32,0:32:72.21:0,72,1653	0/0:16,0:27:4.06:0,4,604	0/0:26,0:26:49.43:0,49,1183	0/1:36,31:56:84.17:1024,0,84	0/0:36,0:36:52.84:0,53,1371	0/0:45,0:43:99:0,108,2497	0/0:21,0:22:59.93:0,60,1242	0/0:42,0:44:99:0,107,2349	0/0:28,0:29:65.98:0,66,1463	0/0:31,0:34:77.76:0,78,1678	0/0:46,0:45:99:0,117,2729	0/0:41,0:41:96.29:0,96,2214	0/0:38,0:37:75.17:0,75,1682	0/0:21,0:21:27.07:0,27,625	1/1:10,16:21:20.33:664,20,0	1/1:5,22:28:36.12:606,36,0	1/1:29,31:58:47.30:915,47,0	0/0:33,0:33:84.29:0,84,1929	0/1:16,0:16:24.80:25,0,511	0/0:46,0:46:99:0,99,2251	0/0:26,0:26:63.16:0,63,1497	0/1:12,16:26:22.29:782,0,22	1/1:9,16:25:38.04:617,38,0	1/1:7,12:19:18.03:302,18,0
chr10	99951283	.	A	AGT	2455.94	PASS	AB=1.000;AC=17;AF=0.315;AN=54;BaseQRankSum=0.683;DP=544;FS=3.753;HRun=0;HaplotypeScore=195.1215;InbreedingCoeff=0.6261;MQ=58.67;MQ0=19;MQRankSum=-2.901;QD=11.98;ReadPosRankSum=-4.158;VQSLOD=2.6771;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:30.57:416,31,0	0/0:4,0:4:6.02:0,6,70	./.	0/0:38,0:21:8.40:0,8,118	0/0:23,0:24:18.36:0,18,184	0/0:11,12:23:0.81:0,1,31	0/0:16,0:13:14.24:0,14,173	1/1:22,0:21:20.81:223,21,0	0/1:18,0:17:2.73:3,0,76	0/0:18,0:18:1.61:0,2,274	0/0:16,0:16:4.13:0,4,42	0/0:21,0:21:11.92:0,12,211	0/0:16,0:16:15.04:0,15,292	0/0:19,0:18:11.48:0,11,132	0/0:15,0:15:14.07:0,14,166	0/0:16,0:16:11.76:0,12,159	0/0:15,0:14:15.05:0,15,176	0/1:16,0:15:0.58:1,0,233	1/1:10,0:9:9:143,9,0	1/1:17,0:17:27.46:309,27,0	1/1:37,2:35:54.16:746,54,0	0/0:15,0:15:12.27:0,12,179	0/0:12,0:12:8.18:0,8,104	0/0:24,0:22:20.97:0,21,246	0/0:18,0:17:7.67:0,8,107	1/1:25,1:26:42.82:514,43,0	1/1:10,2:12:12.70:114,13,0	0/1:14,0:14:43.32:169,0,43
chr10	99951316	.	GT	G	1627.23	PASS	AB=0.839;AC=21;AF=0.375;AN=56;BaseQRankSum=7.208;DP=466;FS=98.348;HRun=1;HaplotypeScore=105.2552;InbreedingCoeff=-0.6122;MQ=31.82;MQ0=53;MQRankSum=-6.689;QD=4.92;ReadPosRankSum=-0.679;VQSLOD=-0.7064;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,3:23:51.35:51,0,137	0/1:6,2:7:26.34:26,0,35	0/0:26,0:1:3.01:0,3,38	0/0:35,0:6:12.04:0,12,152	0/0:18,1:18:3.48:0,3,39	0/1:13,4:15:25.32:42,0,25	0/1:13,4:12:32.21:62,0,32	0/1:16,5:19:99:311,0,208	0/1:14,1:14:56.86:57,0,96	0/1:14,3:17:99:191,0,184	0/0:4,5:9:1.07:0,1,4	0/1:11,6:17:99:144,0,137	0/1:7,4:10:76.24:82,0,76	0/1:19,3:20:99:100,0,127	0/1:12,1:13:2.55:3,0,101	0/1:13,3:15:96.64:132,0,97	0/0:8,1:7:8.98:0,9,156	0/0:11,0:9:26.41:0,26,322	0/1:12,1:9:76.08:76,0,104	0/1:12,3:14:49.87:50,0,167	0/0:26,0:22:33.98:0,34,421	0/1:16,3:19:59.88:60,0,95	0/1:6,4:10:29.67:53,0,30	0/1:13,3:14:3.67:4,0,33	0/1:13,6:19:28.84:32,0,29	0/1:14,4:16:99:138,0,335	0/1:11,1:12:76.36:76,0,189	0/1:10,1:11:87.52:88,0,243
chr10	99951331	.	T	TG	635.08	PASS	AB=0.934;AC=21;AF=0.389;AN=54;BaseQRankSum=0.665;DP=350;FS=0.000;HRun=1;HaplotypeScore=77.7385;InbreedingCoeff=0.0021;MQ=33.51;MQ0=79;MQRankSum=-0.331;QD=3.57;ReadPosRankSum=2.871;VQSLOD=0.1758;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,1:16:4.38:4,0,34	0/1:7,0:5:5.22:5,0,47	0/0:29,0:1:3.01:0,3,43	0/0:32,0:2:3:0,3,29	./.	0/0:19,0:13:4.28:0,4,11	0/1:13,0:8:1.20:1,0,34	0/1:15,0:12:8.16:157,0,8	1/1:11,0:8:2.05:9,2,0	0/1:10,1:11:55.56:85,0,56	0/0:8,0:8:2.22:0,2,12	0/0:14,0:13:10.62:0,11,153	1/1:7,0:6:0.50:25,0,0	0/1:16,2:15:6.91:7,0,94	0/1:7,0:6:2.36:2,0,21	0/0:12,0:11:7.70:0,8,61	0/0:7,0:5:6.02:0,6,71	0/0:10,0:8:21.42:0,21,229	1/1:8,0:4:2.73:29,3,0	0/0:7,1:7:4.32:0,4,22	1/1:14,1:11:1.28:73,1,0	0/0:11,0:11:5.84:0,6,58	0/1:7,0:7:0:1,0,0	0/0:15,0:13:0.01:0,0,1	0/1:13,0:13:13.32:13,0,15	0/1:8,6:11:10.98:224,0,11	0/1:7,2:8:12.02:51,0,12	1/1:4,2:6:6.94:82,7,0
chr10	99952425	.	C	CA	50.06	PASS	AB=0.829;AC=6;AF=0.143;AN=42;BaseQRankSum=-1.546;DP=149;FS=5.395;HRun=0;HaplotypeScore=32.2500;InbreedingCoeff=0.1268;MQ=36.68;MQ0=1;MQRankSum=-1.196;QD=1.56;ReadPosRankSum=3.004;VQSLOD=0.6264;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:0:0,0,0	0/0:0,3:3:0:0,0,1	0/0:8,0:2:5.60:0,6,37	0/0:5,0:1:0.47:0,0,1	./.	./.	0/0:7,0:7:0.39:0,0,1	./.	1/1:3,1:4:2.97:20,3,0	0/1:5,1:6:29.09:42,0,29	0/0:5,2:7:0.47:0,0,1	0/0:3,0:3:0.47:0,0,1	0/0:4,0:4:0:0,0,0	0/0:6,0:6:0.27:0,0,1	./.	0/0:4,0:4:2.04:0,2,6	0/0:7,0:7:0:0,0,0	0/0:6,0:6:2.37:0,2,8	0/1:5,1:6:27.75:34,0,28	./.	0/0:15,0:15:2.30:0,2,11	./.	0/0:3,1:4:0:0,0,0	./.	0/1:6,2:8:0.24:0,0,0	0/1:6,2:8:35.65:40,0,36	0/0:3,0:3:2.68:0,3,11	0/0:1,0:1:2.84:0,3,14
chr10	99952606	.	A	AT	3033.17	PASS	AB=0.618;AC=23;AF=0.411;AN=56;BaseQRankSum=-6.806;DP=449;FS=9.000;HRun=11;HaplotypeScore=53.4957;InbreedingCoeff=0.8541;MQ=65.90;MQ0=1;MQRankSum=0.151;QD=14.80;ReadPosRankSum=-0.482;VQSLOD=3.2500;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:5.60:26,6,0	0/0:6,0:6:14.92:0,15,116	0/0:7,0:7:11.89:0,12,85	0/0:11,0:10:17.81:0,18,130	0/0:25,0:25:53.66:0,54,409	1/1:9,0:10:7.34:46,7,0	1/1:4,15:19:39.08:396,39,0	1/1:9,17:27:13.47:479,13,0	1/1:3,12:15:27.05:274,27,0	0/0:13,0:13:29.83:0,30,232	0/0:21,0:21:53.77:0,54,418	0/0:12,0:12:23.87:0,24,186	0/0:19,1:20:20.40:0,20,341	0/0:16,0:16:38.84:0,39,302	0/0:15,0:15:35.84:0,36,279	0/0:11,0:11:23.87:0,24,186	0/0:23,0:23:59.74:0,60,462	1/1:2,21:23:45.09:457,45,0	0/1:8,12:21:7.58:273,0,8	1/1:1,9:10:27.01:263,27,0	1/1:0,10:10:18.04:183,18,0	0/0:16,0:16:35.84:0,36,278	0/0:14,0:15:15.37:0,15,259	0/0:16,0:16:35.82:0,36,278	0/0:17,0:17:29.82:0,30,232	1/1:7,16:23:18.82:364,19,0	1/1:9,10:19:12.82:301,13,0	1/1:4,11:15:0.80:184,1,0
chr10	99952612	.	T	TTTTTGCTGTTGTTG	1327.51	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.816;DP=474;FS=0.000;HRun=0;HaplotypeScore=182.6346;InbreedingCoeff=0.9342;MQ=64.62;MQ0=1;MQRankSum=-4.465;QD=32.38;ReadPosRankSum=0.191;VQSLOD=2.3507;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:24:9.03:606,9,0	0/0:7,0:7:18.06:0,18,644	0/0:9,0:8:11.70:0,12,315	0/0:13,0:12:28.82:0,29,424	0/0:26,0:26:66.14:0,66,2140	1/1:2,7:17:15.04:832,15,0	0/0:18,0:18:41.96:0,42,1050	0/0:25,0:25:64.86:0,65,1087	0/0:13,0:13:29.43:0,29,635	0/0:13,0:13:33.11:0,33,1247	0/0:20,0:20:57.18:0,57,2105	0/0:12,0:12:33.05:0,33,1034	0/0:19,0:19:53.97:0,54,1860	0/0:17,0:17:42.14:0,42,1592	0/0:15,0:15:39.12:0,39,1383	0/0:10,0:10:30.09:0,30,1030	0/0:22,0:22:60.20:0,60,2279	0/0:22,0:22:47.89:0,48,1167	0/0:20,0:20:53.76:0,54,960	0/0:15,0:15:41.82:0,42,757	0/0:10,0:10:17.89:0,18,435	0/0:17,0:17:36.12:0,36,1346	0/0:18,0:18:47.99:0,48,1519	0/0:16,0:16:42.13:0,42,1331	0/0:16,0:16:39.12:0,39,1310	0/0:26,0:26:59.87:0,60,1219	0/0:19,0:19:41.67:0,42,828	0/0:15,0:15:33.07:0,33,803
chr10	99953549	.	G	GT	1234.40	PASS	AB=0.955;AC=6;AF=0.107;AN=56;BaseQRankSum=-1.733;DP=619;FS=6.198;HRun=10;HaplotypeScore=65.9289;InbreedingCoeff=0.6504;MQ=75.26;MQ0=0;MQRankSum=-1.442;QD=15.05;ReadPosRankSum=-1.298;VQSLOD=3.5363;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:3,35:38:93.05:964,93,0	0/1:9,1:10:5.02:5,0,169	0/1:15,0:15:0.16:0,0,53	0/0:13,0:13:20.43:0,20,153	0/0:31,1:32:39.12:0,39,517	1/1:3,15:19:13.61:385,14,0	0/0:14,1:15:9.92:0,10,282	0/0:30,0:30:77.88:0,78,636	0/0:15,0:15:41.93:0,42,341	0/0:26,0:26:59.89:0,60,492	0/0:26,0:26:59.89:0,60,492	0/0:13,0:13:38.96:0,39,320	0/0:17,2:19:9.96:0,10,288	0/0:14,0:15:40.97:0,41,322	0/0:31,0:31:83.84:0,84,679	0/0:38,0:37:95.84:0,96,782	0/0:18,0:18:50.94:0,51,419	0/0:27,0:27:55.37:0,55,507	0/0:16,0:16:31.97:0,32,252	0/0:25,0:25:65.89:0,66,538	0/0:14,0:14:32.95:0,33,271	0/0:20,2:22:53.90:0,54,442	0/0:13,1:14:3.97:0,4,239	0/0:15,0:15:35.90:0,36,290	0/0:38,0:37:77.20:0,77,805	0/0:26,0:26:53.83:0,54,440	0/0:33,0:32:80.88:0,81,665	0/0:16,0:16:44.94:0,45,369
chr10	99954212	.	TG	T	2042.36	PASS	AB=0.814;AC=19;AF=0.339;AN=56;BaseQRankSum=5.272;DP=451;FS=0.451;HRun=10;HaplotypeScore=59.5489;InbreedingCoeff=0.7032;MQ=81.82;MQ0=1;MQRankSum=-2.276;QD=12.01;ReadPosRankSum=1.555;VQSLOD=3.1145;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:22.78:0,23,103	0/0:6,0:6:9.02:0,9,99	0/0:31,0:20:30.13:0,30,303	0/0:16,0:14:2.14:0,2,90	0/0:17,0:17:30.04:0,30,306	0/1:16,0:16:20.26:20,0,37	0/0:17,0:17:48.12:0,48,520	1/1:5,13:18:35.96:312,36,0	1/1:3,12:15:29.98:260,30,0	0/0:11,0:11:20.84:0,21,225	0/0:11,0:11:24.03:0,24,246	0/0:24,0:24:50.81:0,51,562	0/0:12,0:12:26.93:0,27,271	0/0:15,1:16:13.04:0,13,353	0/0:12,0:12:24.06:0,24,265	0/0:14,0:14:36.10:0,36,397	0/0:24,0:26:65.97:0,66,682	1/1:5,15:20:41.98:364,42,0	1/1:6,8:14:23.92:200,24,0	0/1:3,11:14:8.75:150,0,9	1/1:3,11:14:18.05:222,18,0	0/1:12,2:15:24.40:24,0,115	0/0:11,0:11:30.04:0,30,317	0/0:21,0:21:57.10:0,57,608	0/0:15,1:16:3.95:0,4,232	1/1:6,6:12:23.92:199,24,0	1/1:5,21:26:44.95:390,45,0	1/1:1,5:6:11.99:104,12,0
chr10	99954899	.	C	CCAAAACAAAACAA	963.16	PASS	AB=0.699;AC=5;AF=0.089;AN=56;BaseQRankSum=5.626;DP=617;FS=7.665;HRun=0;HaplotypeScore=224.6598;InbreedingCoeff=-0.1035;MQ=74.67;MQ0=0;MQRankSum=-3.183;QD=9.26;ReadPosRankSum=-5.834;VQSLOD=0.1174;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:24:30.76:0,31,248	0/0:10,0:10:30.10:0,30,953	0/0:27,0:19:46.30:0,46,816	0/0:35,0:29:38.50:0,38,908	0/0:30,0:30:87.30:0,87,2562	0/1:8,5:24:99:267,0,347	0/0:16,0:16:28.75:0,29,1184	0/0:28,0:30:12.52:0,13,1100	0/1:7,2:22:99:127,0,361	0/0:16,0:16:48.16:0,48,1402	0/0:12,0:12:36.12:0,36,1014	0/0:16,0:16:48.16:0,48,1712	0/0:23,0:23:69.19:0,69,1922	0/0:16,0:16:48.15:0,48,1377	0/0:21,0:21:57.19:0,57,1843	0/0:23,0:23:69.24:0,69,2332	0/0:31,0:31:87.30:0,87,2354	0/1:21,0:21:99:551,0,398	0/1:7,0:13:46.52:47,0,368	0/0:10,0:23:56.98:0,57,700	0/0:9,0:22:38.09:0,38,452	0/0:24,0:24:69.22:0,69,2290	0/0:20,0:20:57.17:0,57,1887	0/0:37,0:37:99:0,108,3645	0/0:21,0:21:56.08:0,56,1537	0/1:9,0:24:89.44:89,0,543	0/0:10,0:26:47.65:0,48,548	0/0:1,0:10:6.08:0,6,87
chr10	99956320	.	T	TGTGTGTGTGTGTGTG	328.02	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=1.017;DP=615;FS=0.000;HRun=0;HaplotypeScore=243.0808;InbreedingCoeff=0.4906;MQ=70.74;MQ0=2;MQRankSum=-1.729;QD=8.63;ReadPosRankSum=-1.511;VQSLOD=1.9516;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,10:20:3.01:404,3,0	0/0:10,0:10:30.08:0,30,975	0/0:24,0:20:54.54:0,55,960	0/1:17,0:14:10.83:11,0,573	0/0:32,0:32:93.30:0,93,3371	0/0:25,0:25:51.18:0,51,2175	0/0:24,0:24:72.23:0,72,2740	0/0:35,0:34:99:0,99,3370	0/0:13,0:13:39.13:0,39,1600	0/0:24,0:24:69.18:0,69,2051	0/0:21,0:21:63.21:0,63,2268	0/0:25,0:25:72.22:0,72,2457	0/0:15,0:15:45.15:0,45,1829	0/0:19,0:19:57.17:0,57,2047	0/0:29,0:29:78.26:0,78,3272	0/0:23,0:23:66.18:0,66,2611	0/0:25,0:25:69.21:0,69,2473	0/0:26,0:26:78.23:0,78,2901	0/0:18,0:18:54.19:0,54,2279	0/0:18,0:18:51.18:0,51,1833	0/0:25,0:25:72.25:0,72,2868	0/0:22,0:22:63.18:0,63,2390	0/0:16,0:16:47.81:0,48,1702	0/0:34,0:34:99:0,102,4020	0/0:18,0:18:48.16:0,48,1991	0/0:20,0:20:60.21:0,60,2275	0/0:27,0:27:78.26:0,78,2911	0/0:9,0:9:27.09:0,27,1167
chr10	99956323	.	TTTG	T	675.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.469;DP=595;FS=5.913;HRun=0;HaplotypeScore=87.0255;InbreedingCoeff=0.9334;MQ=68.08;MQ0=2;MQRankSum=-2.761;QD=27.03;ReadPosRankSum=2.734;VQSLOD=3.5804;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:5:9.48:0,9,102	0/0:8,0:8:21.07:0,21,394	0/0:22,0:18:49.91:0,50,621	0/0:18,0:15:30.02:0,30,333	0/0:30,0:30:84.24:0,84,1576	1/1:0,24:25:51.15:771,51,0	0/0:24,0:24:63.75:0,64,1160	0/0:31,0:30:81.22:0,81,1455	0/0:14,0:14:39.10:0,39,737	0/0:20,1:21:16.35:0,16,886	0/0:23,0:23:63.15:0,63,1096	0/0:25,0:25:66.14:0,66,1185	0/0:15,0:15:42.12:0,42,840	0/0:19,0:19:54.12:0,54,965	0/0:31,0:31:93.22:0,93,1708	0/0:23,0:23:69.14:0,69,1310	0/0:24,0:24:69.14:0,69,1208	0/0:26,0:26:78.19:0,78,1341	0/0:20,0:20:60.18:0,60,1082	0/0:18,0:18:54.13:0,54,911	0/0:26,0:26:75.21:0,75,1333	0/0:24,0:24:72.04:0,72,1216	0/0:16,0:16:48.10:0,48,858	0/0:33,0:33:96.23:0,96,1794	0/0:18,0:18:42.63:0,43,854	0/0:20,0:20:57.16:0,57,1048	0/0:27,0:27:78.18:0,78,1329	0/0:8,0:8:24.08:0,24,526
chr10	99959964	.	GCTCTTACCCGTGAT	G	2699.92	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.381;DP=701;FS=5.043;HRun=0;HaplotypeScore=263.6586;InbreedingCoeff=0.9988;MQ=84.73;MQ0=0;MQRankSum=-8.399;QD=65.85;ReadPosRankSum=-0.092;VQSLOD=2.8982;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,21:41:40.29:2795,40,0	0/0:9,0:9:27.09:0,27,1939	0/0:21,0:21:63.20:0,63,3386	0/0:23,0:23:69.24:0,69,4282	0/0:20,0:20:60.21:0,60,3915	0/0:27,0:27:78.25:0,78,5074	0/0:21,0:21:63.22:0,63,4279	0/0:48,0:48:99:0,144,8882	0/0:22,0:22:66.23:0,66,4627	0/0:24,0:24:69.21:0,69,3738	0/0:13,0:13:36.11:0,36,2103	0/0:21,0:21:63.22:0,63,4275	0/0:21,0:21:63.22:0,63,4455	0/0:20,0:20:60.19:0,60,4043	0/0:31,0:31:93.29:0,93,6157	0/0:31,0:31:93.31:0,93,5980	0/0:34,0:34:99:0,102,6479	0/0:25,0:25:75.23:0,75,4956	0/0:22,0:22:66.23:0,66,3960	0/0:29,0:29:87.28:0,87,5765	0/0:25,0:25:75.23:0,75,4427	0/0:35,0:35:99:0,102,6160	0/0:17,0:17:48.16:0,48,3037	0/0:38,0:38:99:0,114,7666	0/0:22,0:22:66.23:0,66,4517	0/0:22,0:22:66.22:0,66,4289	0/0:22,0:22:66.23:0,66,4352	0/0:17,0:17:51.18:0,51,3666
chr10	99959965	.	CTCTTACCCGTGATT	C	2721.83	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.371;DP=701;FS=3.814;HRun=0;HaplotypeScore=263.7594;InbreedingCoeff=0.9987;MQ=85.75;MQ0=0;MQRankSum=-8.413;QD=68.05;ReadPosRankSum=-0.490;VQSLOD=3.0815;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,14:40:75.26:2817,75,0	0/0:9,0:9:27.09:0,27,1899	0/0:22,0:22:63.22:0,63,3509	0/0:24,0:24:72.20:0,72,4359	0/0:20,0:20:60.16:0,60,3769	0/0:26,0:26:75.26:0,75,4903	0/0:21,0:21:63.22:0,63,4102	0/0:49,0:49:99:0,148,8493	0/0:22,0:22:66.23:0,66,4553	0/0:23,0:23:54.19:0,54,3529	0/0:13,0:13:33.11:0,33,1993	0/0:21,0:21:63.22:0,63,4143	0/0:21,0:21:63.22:0,63,4369	0/0:21,0:21:60.21:0,60,4091	0/0:31,0:31:90.30:0,90,5920	0/0:31,0:31:90.29:0,90,5668	0/0:35,0:35:99:0,105,6522	0/0:25,0:25:72.25:0,72,4742	0/0:22,0:22:66.23:0,66,3644	0/0:29,0:29:84.29:0,84,5526	0/0:24,0:24:69.24:0,69,4173	0/0:34,0:34:93.32:0,93,5845	0/0:17,0:17:48.15:0,48,2913	0/0:39,0:39:99:0,117,7637	0/0:22,0:22:66.23:0,66,4298	0/0:21,0:21:63.22:0,63,4106	0/0:22,0:22:66.21:0,66,4217	0/0:17,0:17:51.18:0,51,3567
chr10	99960552	.	G	GT	4117.60	PASS	AB=0.939;AC=20;AF=0.357;AN=56;BaseQRankSum=-4.285;DP=670;FS=0.724;HRun=9;HaplotypeScore=85.4227;InbreedingCoeff=0.8221;MQ=81.44;MQ0=0;MQRankSum=2.127;QD=15.48;ReadPosRankSum=-3.331;VQSLOD=3.2075;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,1:31:13.25:127,0,13	0/0:13,0:13:29.85:0,30,245	0/0:35,0:30:47.93:0,48,410	0/0:27,0:26:37.32:0,37,260	0/0:29,0:30:50.36:0,50,438	0/0:27,0:27:62.91:0,63,533	0/0:33,0:33:68.90:0,69,589	1/1:10,28:38:80.21:706,80,0	1/1:21,0:21:52.63:331,53,0	0/0:25,0:25:54.40:0,54,458	0/0:18,0:18:38.91:0,39,328	0/0:22,0:22:50.92:0,51,431	0/0:31,0:31:65.93:0,66,566	0/0:18,2:20:2.75:0,3,249	0/1:18,2:20:24.38:24,0,264	0/0:29,1:30:35.65:0,36,525	0/0:12,0:12:32.93:0,33,271	1/1:26,0:26:58.73:376,59,0	1/1:8,19:27:57.09:580,57,0	1/1:2,16:18:44.89:419,45,0	1/1:4,21:25:42.59:465,43,0	0/0:17,0:17:35.97:0,36,309	0/0:10,0:10:29.98:0,30,257	0/0:31,0:31:77.88:0,78,653	0/0:19,0:20:50:0,50,417	1/1:5,19:24:33.38:478,33,0	1/1:3,22:25:32.62:364,33,0	1/1:1,8:10:23.90:246,24,0
chr10	99960561	.	TG	T	760.13	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=4.951;DP=618;FS=0.000;HRun=9;HaplotypeScore=91.9831;InbreedingCoeff=0.7186;MQ=83.33;MQ0=0;MQRankSum=-1.531;QD=9.50;ReadPosRankSum=-0.577;VQSLOD=2.2302;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:66.07:66,0,113	0/0:10,1:11:2.67:0,3,270	0/0:38,1:34:35.41:0,35,513	0/0:27,0:23:30.36:0,30,341	0/0:21,0:22:30.58:0,31,530	0/0:23,0:23:60.14:0,60,667	0/0:27,0:27:78.19:0,78,868	0/0:32,0:33:65.01:0,65,478	1/1:12,10:22:25.31:360,25,0	0/0:22,0:22:47.15:0,47,508	0/0:17,0:17:33.08:0,33,365	0/0:19,0:19:48.13:0,48,539	0/0:24,0:24:63.18:0,63,717	0/0:19,0:19:42.07:0,42,446	0/0:16,0:16:42.04:0,42,438	0/0:27,2:29:50.74:0,51,781	0/0:12,0:12:24.06:0,24,265	1/1:5,20:25:51.02:463,51,0	0/0:23,0:23:53.28:0,53,411	0/0:17,0:17:35.54:0,36,254	0/0:23,0:23:44.70:0,45,333	0/0:15,0:15:42.08:0,42,451	0/0:12,0:12:33.06:0,33,355	0/0:29,0:29:69.14:0,69,746	0/0:18,0:18:44.60:0,45,495	0/0:23,0:23:44.63:0,45,349	0/0:27,0:26:46.66:0,47,325	0/0:11,0:11:26.79:0,27,196
chr10	99960764	.	T	TAC	620.96	PASS	AB=0.930;AC=15;AF=0.278;AN=54;BaseQRankSum=0.506;DP=558;FS=1.765;HRun=0;HaplotypeScore=91.0852;InbreedingCoeff=0.0480;MQ=67.00;MQ0=18;MQRankSum=-1.456;QD=2.23;ReadPosRankSum=-2.341;VQSLOD=1.7133;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:34:0:0,0,0	0/0:9,0:9:6.01:0,6,65	0/1:42,0:26:0:0,0,0	./.	0/0:21,0:21:12.03:0,12,127	0/0:19,0:21:11.85:0,12,105	0/0:22,0:24:17.75:0,18,167	0/1:25,0:23:27.23:27,0,30	0/0:11,0:14:15.94:0,16,73	0/1:20,0:20:21.43:21,0,127	0/0:7,0:7:12.01:0,12,124	0/0:18,0:17:15.04:0,15,160	0/0:19,0:19:15.04:0,15,163	0/0:14,0:14:9.02:0,9,98	0/1:13,0:13:10.88:11,0,78	0/0:20,0:21:23.89:0,24,242	0/1:23,0:23:24.91:25,0,234	0/0:12,0:12:3.37:0,3,9	0/1:13,0:12:31.82:32,0,46	1/1:14,7:21:8.90:134,9,0	0/1:27,0:26:11.66:167,0,12	0/0:16,0:20:14.33:0,14,106	0/1:21,1:22:23.60:24,0,159	0/0:37,0:38:24.92:0,25,379	0/0:10,0:12:14.87:0,15,143	0/1:14,4:19:16.70:151,0,17	0/1:9,3:12:23.58:80,0,24	1/1:4,1:5:8.82:100,9,0
chr10	99960893	.	T	TGA	1542.31	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.997;DP=682;FS=11.993;HRun=0;HaplotypeScore=89.9148;InbreedingCoeff=0.9902;MQ=77.00;MQ0=3;MQRankSum=0.287;QD=34.27;ReadPosRankSum=1.968;VQSLOD=5.6896;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:65.97:0,66,772	0/0:10,0:10:18.06:0,18,227	0/0:37,0:32:55.44:0,55,675	0/0:43,0:31:19.43:0,19,469	0/0:32,0:32:84.26:0,84,1047	0/0:26,0:26:69.22:0,69,869	0/0:27,0:27:49.34:0,49,864	0/0:30,0:29:69.22:0,69,870	1/1:0,14:15:39.13:647,39,0	0/0:23,0:23:63.20:0,63,785	0/0:21,0:21:57.18:0,57,719	0/0:23,0:23:60.18:0,60,743	0/0:28,0:28:72.23:0,72,908	0/0:30,0:30:72.19:0,72,868	0/0:29,0:29:72.20:0,72,881	0/0:21,0:21:63.20:0,63,795	0/0:29,0:29:78.25:0,78,984	1/1:2,28:29:63.17:1017,63,0	0/0:21,0:21:51.14:0,51,628	0/0:31,0:30:63.20:0,63,794	0/0:23,0:23:51.16:0,51,643	0/0:26,0:26:69.14:0,69,849	0/0:11,0:11:21.05:0,21,251	0/0:26,0:26:57.18:0,57,718	0/0:18,0:18:45.14:0,45,568	0/0:15,0:15:39.12:0,39,481	0/0:19,0:18:54.13:0,54,640	0/0:13,0:13:27.08:0,27,340
chr10	99961270	.	TCA	T	1530.35	PASS	AB=0.884;AC=12;AF=0.214;AN=56;BaseQRankSum=5.942;DP=730;FS=0.000;HRun=0;HaplotypeScore=112.4476;InbreedingCoeff=0.1193;MQ=64.66;MQ0=13;MQRankSum=0.876;QD=6.05;ReadPosRankSum=1.940;VQSLOD=3.0827;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,14:26:4.55:386,0,5	0/1:7,0:7:12.54:13,0,127	0/1:42,0:26:11.02:11,0,211	0/0:41,0:27:17.84:0,18,226	0/1:29,3:32:37.29:37,0,783	0/0:21,0:21:36.11:0,36,532	0/0:25,1:26:22.22:0,22,692	0/0:29,0:28:47.01:0,47,385	1/1:6,18:26:50.58:565,51,0	0/0:28,0:29:39.69:0,40,694	0/1:12,3:16:41.18:41,0,433	0/0:24,0:24:48.16:0,48,743	0/0:24,1:25:13.66:0,14,641	0/0:25,0:25:45.15:0,45,697	0/1:27,2:29:8.82:9,0,754	0/1:26,6:32:99:135,0,742	0/0:40,2:43:18.75:0,19,1127	1/1:8,17:25:12.96:479,13,0	0/0:7,0:12:20.94:0,21,186	0/0:15,0:25:12.15:0,12,98	0/0:32,0:31:20:0,20,202	0/0:26,1:26:1.20:0,1,409	0/1:17,1:18:8.37:8,0,339	0/0:32,1:33:2.68:0,3,828	0/0:19,0:19:1.38:0,1,291	0/0:16,0:28:45.72:0,46,386	0/0:16,0:29:47.34:0,47,362	0/0:3,0:7:5.92:0,6,44
chr10	99961387	.	A	AAC	2164.32	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.245;DP=867;FS=1.799;HRun=0;HaplotypeScore=109.7948;InbreedingCoeff=0.9225;MQ=60.46;MQ0=9;MQRankSum=0.118;QD=24.59;ReadPosRankSum=1.792;VQSLOD=4.6277;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,30:39:46.07:915,46,0	0/0:7,0:7:21.07:0,21,259	0/0:47,0:22:27.53:0,28,313	0/0:43,0:28:38.48:0,38,366	0/0:24,0:26:62.98:0,63,703	0/0:33,0:34:78.05:0,78,911	0/0:31,0:31:78.21:0,78,934	0/0:45,0:44:86.47:0,86,997	1/1:15,13:27:57.04:850,57,0	0/0:36,0:38:81.89:0,82,920	0/0:22,0:22:57.17:0,57,686	0/0:24,0:25:72:0,72,826	0/0:22,0:23:62.97:0,63,723	0/0:40,0:40:93.23:0,93,1093	0/0:34,0:34:84.25:0,84,1014	0/0:33,0:34:49.27:0,49,939	0/0:38,0:39:86.22:0,86,1021	1/1:12,8:20:2.20:531,2,0	0/0:10,0:10:21.06:0,21,258	0/0:31,0:31:81.21:0,81,949	0/0:34,0:34:66.15:0,66,781	0/0:22,0:21:51.16:0,51,628	0/0:32,0:32:83.99:0,84,971	0/0:43,0:42:99:0,102,1192	0/0:26,0:26:59.72:0,60,663	0/0:39,0:41:89.90:0,90,1016	0/0:37,0:38:93.09:0,93,1092	0/0:14,0:14:42.13:0,42,517
chr10	99961502	.	T	TAC	1644.80	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.690;DP=883;FS=14.100;HRun=0;HaplotypeScore=112.1536;InbreedingCoeff=0.9461;MQ=65.33;MQ0=1;MQRankSum=-1.382;QD=26.96;ReadPosRankSum=0.594;VQSLOD=4.4999;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:71.70:0,72,842	0/0:8,0:8:21.06:0,21,255	0/0:36,0:33:7.93:0,8,317	0/0:33,0:23:15.74:0,16,342	0/0:34,0:34:84.22:0,84,982	0/0:25,0:26:69.04:0,69,814	0/0:25,0:26:66.03:0,66,771	0/0:54,0:55:99:0,108,1267	1/1:8,25:33:29.83:980,30,0	0/0:36,0:36:75.22:0,75,900	0/0:28,0:28:60.54:0,61,792	0/0:22,0:22:54.15:0,54,643	0/0:32,0:32:87.22:0,87,1018	0/0:31,0:31:72.22:0,72,872	0/0:35,0:36:84.09:0,84,997	0/0:35,0:35:78.22:0,78,934	0/0:31,0:32:84.09:0,84,996	1/1:7,20:27:17.79:784,18,0	0/0:24,0:24:51.13:0,51,598	0/0:29,0:29:66.19:0,66,789	0/0:45,0:45:99:0,109,1273	0/0:27,0:27:63.19:0,63,764	0/0:21,0:22:17.55:0,18,547	0/0:41,0:41:90.28:0,90,1091	0/0:28,0:29:63.02:0,63,742	0/0:38,0:38:96.29:0,96,1155	0/0:44,0:44:99:0,111,1333	0/0:12,0:13:29.39:0,29,341
chr10	99963027	.	G	GGT	916.45	PASS	AB=0.982;AC=4;AF=0.071;AN=56;BaseQRankSum=-4.946;DP=586;FS=1.645;HRun=0;HaplotypeScore=81.9137;InbreedingCoeff=0.5352;MQ=73.84;MQ0=1;MQRankSum=-0.563;QD=11.31;ReadPosRankSum=0.131;VQSLOD=3.3956;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,26:37:21.55:1007,22,0	0/0:7,0:7:18.06:0,18,220	0/1:26,1:26:0.85:1,0,450	0/0:35,0:31:52.87:0,53,613	0/0:30,0:30:75.22:0,75,905	0/0:19,0:19:48.14:0,48,575	0/0:18,0:18:36.10:0,36,428	0/0:24,0:25:63.03:0,63,747	0/0:21,0:21:53.74:0,54,619	0/0:24,0:24:66.19:0,66,789	0/0:10,0:10:24.08:0,24,293	0/0:20,0:20:48.14:0,48,574	0/0:12,0:12:33.10:0,33,403	0/0:20,0:20:45.13:0,45,537	0/0:22,0:22:48.13:0,48,573	0/0:22,0:22:60.17:0,60,720	0/0:22,0:22:48.08:0,48,544	0/0:19,0:19:9.37:0,9,510	0/0:21,0:21:42.12:0,42,502	0/0:19,0:19:42.11:0,42,489	0/0:34,0:34:72.15:0,72,837	0/0:13,0:13:27.08:0,27,330	0/0:15,0:15:33.09:0,33,391	0/0:32,0:32:58.24:0,58,884	0/1:17,0:17:7.29:7,0,367	0/0:18,1:18:42.09:0,42,496	0/0:17,0:17:39.11:0,39,464	0/0:9,0:9:21.07:0,21,257
chr10	99963189	.	T	TACACACAC	3072.07	PASS	AB=1.000;AC=22;AF=0.407;AN=54;BaseQRankSum=2.106;DP=602;FS=5.152;HRun=0;HaplotypeScore=171.6367;InbreedingCoeff=0.4208;MQ=60.49;MQ0=13;MQRankSum=-3.366;QD=8.98;ReadPosRankSum=-3.606;VQSLOD=1.5470;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:33:38.93:492,39,0	0/1:10,0:11:2.96:3,0,285	0/1:27,0:15:0:0,0,0	./.	0/0:20,0:22:32.77:0,33,602	0/0:26,0:26:22.06:0,22,790	0/1:21,0:21:1.13:1,0,306	1/1:42,0:42:24.67:271,25,0	0/1:11,0:11:32.60:33,0,208	0/1:22,0:25:26.69:27,0,710	0/1:18,0:19:3.47:3,0,466	0/0:16,0:17:27.06:0,27,489	0/0:10,0:20:5.51:0,6,131	0/0:18,0:19:45.01:0,45,777	0/0:26,0:27:44.82:0,45,995	0/0:18,0:20:51.12:0,51,1037	0/0:27,0:29:4.16:0,4,707	0/0:16,0:16:5.12:0,5,405	1/1:12,0:11:7.10:102,7,0	1/1:9,13:23:5.92:111,6,0	1/1:31,0:27:20.93:166,21,0	0/0:10,0:10:14.87:0,15,210	0/0:17,0:18:26.85:0,27,491	0/1:18,0:18:31.32:31,0,547	0/0:11,0:12:27.09:0,27,596	1/1:13,18:33:62.98:1328,63,0	1/1:9,12:22:12.03:393,12,0	0/1:9,0:9:44.66:290,0,45
chr10	99964472	.	ACCTC	A	1056.73	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=6.601;DP=630;FS=9.757;HRun=0;HaplotypeScore=115.6959;InbreedingCoeff=0.7716;MQ=65.65;MQ0=2;MQRankSum=-2.435;QD=14.88;ReadPosRankSum=0.646;VQSLOD=2.8870;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:48.12:0,48,1117	0/0:8,0:8:15.04:0,15,298	0/0:25,1:17:29.41:0,29,629	0/1:39,0:28:26.42:26,0,562	0/0:17,0:17:45.15:0,45,1090	0/0:32,0:32:81.28:0,81,2034	0/0:35,0:35:90.31:0,90,2207	0/0:21,0:20:42.13:0,42,921	1/1:1,17:17:42.14:725,42,0	0/0:21,0:21:60.21:0,60,1446	0/0:19,0:19:42.14:0,42,1059	0/0:21,0:21:54.19:0,54,1305	0/0:12,0:12:36.12:0,36,877	0/0:17,0:17:48.15:0,48,1133	0/0:24,0:24:72.25:0,72,1761	0/0:25,0:25:69.24:0,69,1682	0/0:18,0:18:37.94:0,38,894	1/1:2,12:14:27.05:435,27,0	0/0:19,0:19:36.12:0,36,869	0/0:20,0:20:48.16:0,48,1210	0/0:38,0:38:99:0,99,2421	0/0:18,0:18:33.11:0,33,831	0/0:14,0:14:39.13:0,39,929	0/0:23,0:23:57.20:0,57,1411	0/0:26,0:26:57.19:0,57,1363	0/0:30,0:30:69.24:0,69,1681	0/0:30,0:29:75.26:0,75,1829	0/0:14,0:14:18.06:0,18,382
chr10	99964531	.	G	GTC	6896.95	PASS	AB=0.657;AC=19;AF=0.339;AN=56;BaseQRankSum=2.605;DP=610;FS=12.982;HRun=0;HaplotypeScore=104.2323;InbreedingCoeff=0.8759;MQ=54.80;MQ0=12;MQRankSum=-2.858;QD=29.10;ReadPosRankSum=1.420;VQSLOD=5.8041;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,26:33:3.14:632,3,0	0/0:5,0:5:9.03:0,9,120	0/0:29,0:16:33.10:0,33,421	0/0:33,0:17:34.19:0,34,406	0/0:23,0:23:48.12:0,48,608	0/0:21,0:21:36.22:0,36,649	0/0:27,0:27:53.44:0,53,644	1/1:9,24:29:54.12:917,54,0	0/1:11,12:23:27.33:533,0,27	0/0:26,0:26:60.19:0,60,785	0/0:15,0:15:30.10:0,30,399	0/0:22,0:22:63.14:0,63,815	0/0:19,0:19:51.16:0,51,672	0/0:13,0:13:33.10:0,33,425	0/0:25,0:25:57.16:0,57,732	0/0:23,0:23:63.03:0,63,795	0/0:18,0:18:11.39:0,11,377	1/1:4,7:11:17.53:347,18,0	1/1:5,13:15:21.27:631,21,0	1/1:3,19:22:48.13:791,48,0	1/1:11,15:26:54.17:897,54,0	0/0:12,0:12:24.06:0,24,302	0/0:17,0:17:48.01:0,48,613	0/0:25,0:25:51.06:0,51,677	0/0:20,0:20:48.14:0,48,622	1/1:10,14:25:18.01:689,18,0	1/1:10,17:26:43.78:887,44,0	1/1:4,14:17:33.58:573,34,0
chr10	99964555	.	TTC	T	558.83	PASS	AB=0.957;AC=17;AF=0.327;AN=52;BaseQRankSum=2.869;DP=581;FS=19.710;HRun=0;HaplotypeScore=120.4800;InbreedingCoeff=0.0775;MQ=50.20;MQ0=18;MQRankSum=-0.577;QD=1.82;ReadPosRankSum=-0.703;VQSLOD=1.1543;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:7.75:69,8,0	1/1:5,1:6:11.89:94,12,0	./.	./.	0/1:16,0:25:4.65:5,0,28	0/0:14,0:14:10.75:0,11,92	0/1:21,3:24:29.44:29,0,283	0/0:29,0:14:0:0,0,0	0/0:17,0:22:6.45:0,6,102	0/0:25,0:25:27:0,27,302	0/1:22,0:22:6.55:7,0,304	0/0:27,0:27:24.66:0,25,667	0/1:22,1:23:2.80:3,0,486	0/0:17,0:17:26.41:0,26,337	1/1:9,14:23:29.87:310,30,0	0/1:23,2:25:64.71:65,0,560	0/0:11,0:20:17.96:0,18,158	0/0:10,0:9:7.17:0,7,36	0/1:18,0:15:1.55:5,0,2	0/1:22,0:22:29.09:29,0,49	0/0:16,0:15:5.76:0,6,53	0/1:17,0:16:9.07:9,0,242	0/1:19,0:19:6.02:6,0,286	0/0:22,0:22:27.56:0,28,398	0/0:20,0:20:20.87:0,21,230	0/1:25,0:26:25.94:63,0,26	0/1:18,0:21:19.06:19,0,83	0/0:21,0:19:6.30:0,6,47
chr10	99964559	.	C	CTCTT	4122.14	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=9.342;DP=586;FS=1.716;HRun=0;HaplotypeScore=133.5049;InbreedingCoeff=0.6711;MQ=49.95;MQ0=21;MQRankSum=-5.884;QD=16.76;ReadPosRankSum=-1.365;VQSLOD=3.1796;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:13.17:13,0,206	0/0:6,0:6:11.22:0,11,83	0/0:12,0:6:14.92:0,15,143	0/0:23,0:6:14.39:0,14,125	0/1:26,0:25:41.13:41,0,183	0/0:16,0:16:26.58:0,27,229	0/0:23,0:23:53.82:0,54,625	1/1:25,0:10:28.54:179,29,0	1/1:22,0:22:34.44:464,34,0	0/0:25,0:25:71.29:0,71,742	0/0:23,0:23:49.17:0,49,631	0/0:25,0:25:72.01:0,72,1028	0/0:22,0:22:54.13:0,54,836	0/0:16,0:16:36.07:0,36,548	0/0:25,0:25:53.75:0,54,496	0/0:25,0:25:69.15:0,69,992	0/0:18,0:18:27.05:0,27,194	0/1:10,0:9:9.98:138,0,10	1/1:20,1:18:2.94:321,3,0	1/1:18,5:23:38.46:715,38,0	0/1:15,0:14:2.91:226,0,3	0/0:19,0:18:38.65:0,39,443	0/0:20,0:20:46.96:0,47,587	0/0:23,0:23:49.89:0,50,682	0/0:19,0:19:20.36:0,20,456	1/1:27,1:27:61.03:835,61,0	1/1:22,2:22:63.04:887,63,0	1/1:21,0:19:16.17:303,16,0
chr10	99965301	.	AGGGCCATAGAGC	A	8981.42	PASS	AB=0.512;AC=13;AF=0.232;AN=56;BaseQRankSum=14.058;DP=585;FS=8.463;HRun=0;HaplotypeScore=202.4915;InbreedingCoeff=0.8957;MQ=91.09;MQ0=0;MQRankSum=-12.152;QD=82.40;ReadPosRankSum=-0.427;VQSLOD=3.7971;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.25:0,72,4473	0/0:16,0:16:45.15:0,45,2714	0/0:28,0:28:84.29:0,84,4455	0/0:23,0:23:60.37:0,60,2876	0/0:24,0:24:69.24:0,69,3955	0/0:17,0:17:48.16:0,48,2764	0/0:24,0:24:66.20:0,66,3472	1/1:4,12:16:36.05:1112,36,0	0/0:17,0:17:51.18:0,51,3059	0/0:24,0:24:72.25:0,72,4350	0/0:28,0:28:84.29:0,84,4913	0/0:23,0:23:69.24:0,69,3992	0/0:24,0:24:66.23:0,66,4054	0/0:25,0:25:75.25:0,75,4405	0/0:22,0:22:63.22:0,63,3778	0/0:20,0:20:60.21:0,60,3715	0/0:17,0:17:51.18:0,51,3039	0/0:27,0:27:81.28:0,81,4722	1/1:2,12:14:36.07:1204,36,0	1/1:4,14:18:36.12:1312,36,0	1/1:4,10:14:21.07:809,21,0	0/0:21,0:21:63.22:0,63,3865	0/0:27,0:27:78.27:0,78,4681	0/0:25,0:25:75.24:0,75,4486	0/0:20,0:20:60.21:0,60,3582	0/1:1,21:22:99:2228,0,122	1/1:3,15:18:45.15:1737,45,0	1/1:1,6:7:15.05:579,15,0
chr10	99967481	.	T	TAC	1291.36	PASS	AB=1.000;AC=19;AF=0.352;AN=54;BaseQRankSum=6.679;DP=570;FS=0.000;HRun=0;HaplotypeScore=99.8091;InbreedingCoeff=0.7402;MQ=68.60;MQ0=16;MQRankSum=-3.685;QD=6.52;ReadPosRankSum=-1.953;VQSLOD=2.8285;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:11.89:0,12,86	0/0:8,0:7:11.56:0,12,81	./.	0/0:26,0:19:3:0,3,30	0/0:24,0:24:20.84:0,21,163	0/0:32,0:30:11.98:0,12,329	0/0:24,0:23:20.93:0,21,167	1/1:44,0:43:31.25:262,31,0	0/0:18,0:18:5.68:0,6,28	1/1:22,0:21:7.31:152,7,0	1/1:5,0:5:3:25,3,0	0/0:15,0:13:14.73:0,15,117	0/0:18,0:17:17.83:0,18,132	0/0:16,0:16:18.46:0,18,167	0/0:23,0:22:25.87:0,26,204	0/0:19,0:18:26.92:0,27,243	0/0:24,0:23:10.95:0,11,242	0/0:13,0:12:5.68:0,6,28	1/1:16,0:16:17.93:144,18,0	1/1:14,0:14:14.98:125,15,0	1/1:20,0:18:17.95:135,18,0	0/1:20,0:18:20.02:20,0,160	0/0:16,0:16:11.74:0,12,98	0/0:37,0:37:38.13:0,38,379	0/0:21,0:20:32.32:0,32,267	1/1:20,14:34:51.81:427,52,0	1/1:16,0:16:1.10:113,1,0	1/1:7,0:7:11.79:80,12,0
chr10	99967508	.	ACACACACACTCTCTCTCTCT	A	653.86	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=3.432;DP=580;FS=14.428;HRun=0;HaplotypeScore=263.0418;InbreedingCoeff=0.5910;MQ=49.65;MQ0=33;MQRankSum=-2.354;QD=11.68;ReadPosRankSum=0.064;VQSLOD=1.0554;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:17.21:0,17,583	0/0:7,0:6:18.06:0,18,953	0/0:5,0:1:3.01:0,3,58	0/0:8,0:2:6.02:0,6,130	0/0:19,0:19:48.64:0,49,2525	0/0:38,0:36:99:0,102,5398	0/0:21,0:20:49.98:0,50,1709	0/0:39,0:37:86.46:0,86,1766	1/1:3,16:19:5.81:320,6,0	0/0:18,0:16:48.16:0,48,2777	0/0:7,0:7:9.03:0,9,484	0/0:17,0:15:30.54:0,31,1507	0/0:15,0:13:30.10:0,30,1570	0/0:20,0:20:54.17:0,54,2900	0/0:25,0:22:57.67:0,58,3202	0/0:24,0:23:64.45:0,64,3605	0/0:26,0:24:60.12:0,60,3266	1/1:6,13:18:8.96:431,9,0	0/0:21,0:20:44.86:0,45,1552	0/1:17,0:16:14.55:15,0,991	0/0:22,0:17:32.18:0,32,1473	0/0:23,0:20:33.11:0,33,1898	0/0:20,0:20:46.10:0,46,2577	0/0:37,0:35:85.09:0,85,4085	0/0:24,0:23:64.77:0,65,3812	0/0:32,0:32:88.18:0,88,3704	0/0:20,0:19:50.90:0,51,2001	0/0:14,0:10:23.03:0,23,673
chr10	99967716	.	G	GA	717.99	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.809;DP=497;FS=6.351;HRun=9;HaplotypeScore=49.0076;InbreedingCoeff=0.8654;MQ=71.60;MQ0=0;MQRankSum=-0.398;QD=25.64;ReadPosRankSum=1.719;VQSLOD=4.3569;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:68.97:0,69,599	0/0:8,0:8:20.97:0,21,177	0/0:10,0:11:28.81:0,29,216	0/0:8,0:8:0.06:0,0,62	0/0:27,0:27:71.95:0,72,619	0/0:18,0:18:50.99:0,51,443	0/0:7,0:7:18:0,18,156	0/0:34,0:35:76.98:0,77,657	1/1:0,12:13:39.11:431,39,0	0/0:27,0:27:68.98:0,69,599	0/0:16,0:16:35.97:0,36,313	0/0:18,0:18:41.98:0,42,364	0/0:12,0:12:26.96:0,27,234	0/0:16,0:16:47.99:0,48,417	0/0:18,0:18:41.97:0,42,361	0/0:11,0:11:29.99:0,30,260	0/0:19,0:19:47.98:0,48,417	1/1:2,13:15:16.06:405,16,0	0/0:18,0:18:47.99:0,48,417	0/0:15,0:15:44.99:0,45,391	0/0:8,0:8:21:0,21,182	0/0:18,0:19:53.02:0,53,449	0/0:23,0:24:67.98:0,68,570	0/0:12,0:12:29.99:0,30,260	0/0:20,0:21:56.02:0,56,475	0/0:27,0:28:68.01:0,68,579	0/0:23,0:23:62.98:0,63,547	0/0:23,0:23:65.98:0,66,573
chr10	99968196	.	CTTGT	C	6221.64	PASS	AB=0.784;AC=18;AF=0.321;AN=56;BaseQRankSum=12.537;DP=737;FS=5.794;HRun=0;HaplotypeScore=124.5584;InbreedingCoeff=0.8376;MQ=67.67;MQ0=4;MQRankSum=-1.826;QD=23.84;ReadPosRankSum=0.580;VQSLOD=4.5299;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:47:75.23:0,75,1305	0/0:15,0:15:36.08:0,36,765	0/0:34,0:28:25.31:0,25,492	0/0:32,0:29:45.15:0,45,1033	0/0:22,0:22:63.20:0,63,1416	0/0:21,0:20:51.16:0,51,1184	0/0:22,0:22:48.16:0,48,1147	1/1:16,15:31:48.13:723,48,0	1/1:5,16:21:39.13:632,39,0	0/0:24,0:24:57.18:0,57,1320	0/0:24,0:24:57.17:0,57,1295	0/0:35,0:35:93.32:0,93,2220	0/0:17,0:17:30.10:0,30,725	0/0:28,0:28:63.20:0,63,1471	0/0:26,0:26:54.17:0,54,1229	0/1:31,2:33:22.03:22,0,1570	0/0:31,0:31:55.02:0,55,1181	1/1:9,16:26:39.13:605,39,0	1/1:14,7:20:24.07:366,24,0	1/1:4,23:26:60.20:973,60,0	1/1:7,19:26:45.15:730,45,0	0/0:18,0:18:33.10:0,33,721	0/0:23,0:23:45.15:0,45,1044	0/0:33,1:34:26.61:0,27,1645	0/0:22,0:22:57.16:0,57,1273	0/1:12,18:30:15.42:759,0,15	1/1:4,30:35:66.53:1071,67,0	1/1:3,8:11:21.07:340,21,0
chr10	99969980	.	T	TG	3627.13	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-2.853;DP=321;FS=2.231;HRun=2;HaplotypeScore=43.4788;InbreedingCoeff=0.9220;MQ=50.25;MQ0=6;MQRankSum=-7.106;QD=32.39;ReadPosRankSum=-0.552;VQSLOD=3.0276;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:28.12:0,28,523	0/0:5,0:5:12.04:0,12,149	0/0:4,0:2:6:0,6,60	0/0:1,0:1:2.97:0,3,20	0/0:15,0:15:39.12:0,39,484	0/0:14,0:14:27.08:0,27,335	0/0:15,0:15:42.13:0,42,520	1/1:5,17:20:51.17:730,51,0	1/1:0,3:3:9.03:129,9,0	0/0:12,0:12:36.11:0,36,446	0/0:9,0:9:21.07:0,21,260	0/0:8,0:8:21.05:0,21,248	0/0:11,0:11:17.96:0,18,223	0/0:11,0:11:30.08:0,30,358	0/0:10,0:9:27.08:0,27,333	0/0:5,0:5:9.03:0,9,112	0/0:24,0:24:63.14:0,63,760	1/1:3,6:7:18.06:250,18,0	1/1:3,13:13:39.13:561,39,0	1/1:0,17:16:42.06:577,42,0	1/1:0,7:6:15.05:216,15,0	0/0:5,0:5:12.04:0,12,148	0/0:13,0:13:39.12:0,39,483	0/0:11,0:11:33.10:0,33,409	0/0:14,0:14:30.09:0,30,372	1/1:1,12:13:33.11:474,33,0	1/1:2,12:14:27.09:388,27,0	1/1:0,11:11:21.07:302,21,0
chr10	99970019	.	AAC	A	2795.89	PASS	AB=1.000;AC=28;AF=0.519;AN=54;BaseQRankSum=0.917;DP=494;FS=8.064;HRun=0;HaplotypeScore=97.1836;InbreedingCoeff=0.0759;MQ=44.12;MQ0=33;MQRankSum=-3.995;QD=9.26;ReadPosRankSum=-4.740;VQSLOD=1.5777;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:21:30.87:269,31,0	0/1:8,0:8:26.72:27,0,83	0/0:65,0:10:20.62:0,21,195	0/0:50,0:12:17.59:0,18,131	0/1:22,0:21:85.45:85,0,107	0/1:15,0:15:33.27:33,0,139	0/0:17,0:16:19.90:0,20,212	1/1:14,6:21:43.45:450,43,0	1/1:9,1:10:1.92:86,2,0	0/1:16,0:14:31.64:32,0,178	0/1:15,0:15:12.55:13,0,103	0/1:14,0:14:33.56:34,0,84	0/1:15,0:13:31.01:31,0,75	0/0:11,0:10:4.69:0,5,104	0/1:8,0:8:19.50:20,0,64	0/1:9,0:9:10.13:27,0,10	0/1:27,0:26:19.74:20,0,258	0/1:8,0:9:17.09:66,0,17	1/1:2,10:12:36:415,36,0	1/1:9,12:21:47.10:498,47,0	./.	0/1:8,0:7:12.44:12,0,84	0/0:13,0:13:20.98:0,21,151	0/0:11,0:10:21.59:0,22,140	0/0:24,0:24:31.54:0,32,354	1/1:8,9:18:35.32:467,35,0	1/1:8,3:12:26.72:181,27,0	1/1:4,9:13:22.80:216,23,0
chr10	99970021	.	CCA	C	758.41	PASS	AB=0.994;AC=20;AF=0.370;AN=54;BaseQRankSum=0.823;DP=498;FS=14.443;HRun=0;HaplotypeScore=104.6298;InbreedingCoeff=0.2358;MQ=45.69;MQ0=34;MQRankSum=-3.058;QD=3.40;ReadPosRankSum=-4.388;VQSLOD=-0.3837;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:20:30.14:264,30,0	0/0:8,0:8:15.03:0,15,114	0/0:67,0:10:16.75:0,17,152	0/0:53,0:14:13.35:0,13,88	0/1:19,0:20:51.58:52,0,155	0/1:15,0:15:33.72:34,0,132	0/0:18,0:17:14.96:0,15,229	1/1:19,3:21:1.13:150,1,0	0/1:10,0:10:0.86:54,0,1	0/1:16,0:14:4.36:4,0,110	0/0:15,0:15:1.59:0,2,115	0/0:14,0:14:4.75:0,5,111	0/1:15,0:13:5.36:5,0,117	0/1:11,0:10:8.85:9,0,71	0/0:8,0:8:8.93:0,9,72	0/0:9,0:9:5.85:0,6,23	0/0:27,0:26:36.23:0,36,348	0/1:10,0:9:3.77:4,0,33	1/1:12,1:12:7.60:78,8,0	1/1:21,1:22:2.72:113,3,0	./.	0/0:8,0:7:10.67:0,11,119	0/0:13,0:13:5.85:0,6,130	0/0:11,0:10:22.38:0,22,167	0/0:23,0:23:36.93:0,37,461	1/1:17,1:18:1.28:81,1,0	0/1:13,0:12:8.46:8,0,20	1/1:13,0:13:5.92:60,6,0
chr10	99970035	.	A	AAAG	2537.21	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=-0.997;DP=515;FS=8.427;HRun=0;HaplotypeScore=106.9859;InbreedingCoeff=0.7189;MQ=48.41;MQ0=31;MQRankSum=-3.916;QD=14.84;ReadPosRankSum=0.556;VQSLOD=2.9199;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:21:41.34:0,41,357	0/0:8,0:8:17.72:0,18,200	0/0:64,0:15:9.24:0,9,152	0/1:46,0:13:17.59:18,0,79	0/0:23,0:22:34.97:0,35,423	0/0:17,0:17:38.78:0,39,359	0/0:16,0:15:30.60:0,31,364	1/1:20,1:27:50.72:490,51,0	0/0:14,0:14:19.85:0,20,124	0/0:19,0:17:29.76:0,30,289	0/0:13,0:13:18.87:0,19,238	0/0:16,0:16:39.88:0,40,360	0/0:15,0:13:11.84:0,12,192	0/0:11,0:10:2.97:0,3,146	0/0:9,0:9:23.47:0,23,201	0/0:8,0:8:10.19:0,10,92	0/0:28,0:27:57.49:0,57,540	0/1:10,0:9:11.65:12,0,36	1/1:12,5:18:42.06:442,42,0	1/1:13,4:19:41.65:507,42,0	1/1:3,0:2:5.94:43,6,0	0/0:9,0:8:17.96:0,18,191	0/0:11,0:11:7.35:0,7,230	0/0:12,0:11:26.97:0,27,278	0/0:26,0:26:62.60:0,63,640	1/1:12,5:19:9.56:541,10,0	1/1:11,3:15:42.02:519,42,0	1/1:7,2:11:5.85:154,6,0
chr10	99970729	.	GA	G	3167.15	PASS	AB=0.609;AC=17;AF=0.304;AN=56;BaseQRankSum=12.619;DP=635;FS=1.139;HRun=11;HaplotypeScore=90.1285;InbreedingCoeff=0.8641;MQ=79.19;MQ0=12;MQRankSum=-2.768;QD=16.94;ReadPosRankSum=0.213;VQSLOD=4.1476;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:21:43.04:0,43,246	0/0:15,0:15:36.08:0,36,376	0/0:61,0:32:31.42:0,31,272	0/0:53,1:22:1.24:0,1,137	0/0:30,0:30:78.17:0,78,816	0/0:18,2:22:13.73:0,14,517	0/0:15,0:15:20.62:0,21,394	1/1:6,19:26:67.83:534,68,0	1/1:2,11:14:27.06:281,27,0	0/0:20,1:21:26.48:0,26,487	0/0:18,2:20:7.90:0,8,486	0/0:10,0:10:24.06:0,24,256	0/0:17,0:17:51.11:0,51,536	0/0:10,0:10:24.05:0,24,248	0/0:17,0:17:42.07:0,42,427	0/0:21,0:21:60.11:0,60,616	0/0:32,0:32:70.35:0,70,760	1/1:6,13:19:38.95:320,39,0	1/1:7,16:23:53:438,53,0	1/1:6,17:23:21.96:380,22,0	0/1:5,7:14:35.07:109,0,35	0/0:22,0:23:62.90:0,63,607	0/0:21,0:21:42.07:0,42,435	0/0:12,0:14:26.73:0,27,252	0/0:23,0:24:69:0,69,710	1/1:7,15:23:30.13:426,30,0	1/1:6,20:26:34.28:481,34,0	1/1:1,16:19:52.01:404,52,0
chr10	99970742	.	AT	A	5470.26	PASS	AB=0.983;AC=22;AF=0.393;AN=56;BaseQRankSum=15.221;DP=639;FS=2.311;HRun=8;HaplotypeScore=87.2433;InbreedingCoeff=0.8496;MQ=74.03;MQ0=13;MQRankSum=-5.788;QD=16.68;ReadPosRankSum=1.551;VQSLOD=4.9886;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,5:21:59.43:544,59,0	0/0:13,0:13:38.86:0,39,447	0/1:61,0:29:27.74:28,0,285	0/1:52,1:20:27.53:28,0,78	0/0:29,0:29:81.25:0,81,978	0/0:22,0:22:60.15:0,60,690	0/0:19,0:19:57.17:0,57,688	1/1:5,27:32:90.08:846,90,0	1/1:1,13:14:41.90:389,42,0	0/0:21,0:21:60.17:0,60,705	0/0:25,0:25:69.20:0,69,823	0/0:7,0:7:21.06:0,21,244	0/0:20,0:20:57.17:0,57,677	0/0:10,0:10:30.09:0,30,362	0/0:16,0:16:48.14:0,48,569	0/0:19,0:19:51.15:0,51,612	0/0:32,0:32:73.37:0,73,1071	1/1:2,14:16:45.05:428,45,0	1/1:5,20:25:63.08:603,63,0	1/1:3,19:22:57.09:548,57,0	1/1:2,9:11:27.04:260,27,0	0/0:24,0:24:66.18:0,66,767	0/0:16,0:16:42.08:0,42,489	0/0:11,0:11:27.07:0,27,313	0/0:27,0:27:69.16:0,69,786	1/1:7,17:24:55.62:517,56,0	1/1:3,23:26:72.06:673,72,0	1/1:0,21:21:63.10:607,63,0
chr10	99970907	.	A	AT	5195.05	PASS	AB=0.566;AC=19;AF=0.339;AN=56;BaseQRankSum=-12.156;DP=574;FS=0.346;HRun=10;HaplotypeScore=60.9024;InbreedingCoeff=0.8438;MQ=77.66;MQ0=0;MQRankSum=-1.179;QD=20.70;ReadPosRankSum=-0.981;VQSLOD=5.3643;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,35:43:71.13:764,71,0	0/0:4,0:4:11.99:0,12,99	0/0:12,1:14:5.46:0,5,102	0/0:16,0:16:20.85:0,21,159	0/0:15,0:15:35.86:0,36,288	0/0:23,0:23:62.91:0,63,514	0/0:23,0:24:58.92:0,59,467	1/1:10,30:40:65.52:872,66,0	1/1:3,20:24:56.98:590,57,0	0/0:25,0:26:58.94:0,59,474	0/0:10,0:10:26.97:0,27,221	0/0:18,0:19:22:0,22,347	0/0:25,0:26:64.91:0,65,519	0/0:18,0:19:46.97:0,47,375	0/0:24,0:25:46.36:0,46,502	0/0:22,0:22:47.92:0,48,394	0/0:30,0:30:80.98:0,81,652	1/1:2,15:18:4.69:445,5,0	1/1:5,19:24:57.11:588,57,0	1/1:3,11:14:2.38:219,2,0	1/1:4,10:14:21.05:224,21,0	0/0:13,0:17:41.10:0,41,295	0/0:10,0:10:26.95:0,27,221	0/0:14,0:16:37.01:0,37,283	0/0:7,0:7:14.92:0,15,117	1/1:10,21:32:4.26:599,4,0	0/1:7,23:30:1.58:599,0,2	1/1:2,10:12:8.44:295,8,0
chr10	99971229	.	C	CG	153.23	PASS	AC=4;AF=0.080;AN=50;BaseQRankSum=0.174;DP=95;FS=28.476;HRun=5;HaplotypeScore=14.6385;InbreedingCoeff=0.3830;MQ=98.04;MQ0=0;MQRankSum=-2.921;QD=11.79;ReadPosRankSum=1.568;VQSLOD=0.1598;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:12.03:0,12,129	0/0:1,0:1:3.01:0,3,32	0/0:5,0:5:12.01:0,12,124	0/0:6,0:6:8.35:0,8,61	./.	./.	0/0:4,0:4:9.02:0,9,97	0/0:6,0:6:15.03:0,15,154	1/1:0,7:7:9.03:118,9,0	0/0:4,0:4:12.03:0,12,129	0/0:2,0:2:6.02:0,6,64	0/0:1,0:1:3.01:0,3,32	0/0:2,0:2:6.02:0,6,64	0/0:2,0:2:3.01:0,3,32	0/0:3,0:3:6.01:0,6,64	0/0:3,0:3:6.01:0,6,64	0/0:4,0:4:9.02:0,9,97	1/1:3,3:6:12.01:139,12,0	0/0:4,0:4:5.97:0,6,64	0/0:3,0:3:6.01:0,6,64	0/0:7,0:7:12.03:0,12,128	0/0:4,0:4:9.02:0,9,96	./.	0/0:5,0:5:12.03:0,12,129	0/0:2,0:2:6.02:0,6,64	0/0:2,0:2:3.01:0,3,32	0/0:3,0:3:9.02:0,9,96	0/0:2,0:2:6.02:0,6,64
chr10	99974617	.	TAAA	T	2459.64	PASS	AB=0.941;AC=21;AF=0.375;AN=56;BaseQRankSum=2.017;DP=475;FS=0.000;HRun=16;HaplotypeScore=82.0860;InbreedingCoeff=0.9505;MQ=70.84;MQ0=1;MQRankSum=-1.062;QD=12.55;ReadPosRankSum=4.028;VQSLOD=1.0428;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:24:39.63:231,40,0	0/0:10,0:12:31.33:0,31,437	0/0:27,0:21:39.51:0,40,400	0/1:15,0:7:0.33:0,0,14	0/0:19,0:22:44.78:0,45,572	0/0:13,0:12:27.60:0,28,401	0/0:10,0:15:25.28:0,25,340	1/1:10,8:18:23.86:257,24,0	1/1:1,14:15:26.83:290,27,0	0/0:17,0:17:41.46:0,41,620	0/0:18,0:19:44.21:0,44,603	0/0:17,0:17:39.12:0,39,604	0/0:19,0:20:53.72:0,54,741	0/0:13,0:15:34.83:0,35,426	0/0:15,0:17:51.10:0,51,704	0/0:8,0:7:21.07:0,21,355	0/0:22,0:27:69.09:0,69,988	1/1:5,14:21:47.95:485,48,0	1/1:7,9:16:18.84:169,19,0	1/1:5,6:11:18.97:200,19,0	1/1:4,7:11:14.99:151,15,0	0/0:8,0:9:16.26:0,16,200	0/0:12,0:13:31.33:0,31,478	0/0:13,0:16:42.04:0,42,566	0/0:8,0:11:24.02:0,24,272	1/1:6,15:21:32.31:336,32,0	1/1:4,20:27:36.27:397,36,0	1/1:9,4:16:15.22:162,15,0
chr10	99974631	.	AAAC	A	701.61	PASS	AB=0.982;AC=13;AF=0.232;AN=56;BaseQRankSum=9.917;DP=511;FS=31.209;HRun=0;HaplotypeScore=93.8567;InbreedingCoeff=0.0044;MQ=70.86;MQ0=1;MQRankSum=-0.089;QD=3.47;ReadPosRankSum=3.575;VQSLOD=0.2385;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:1.43:58,1,0	0/0:13,0:13:30.93:0,31,363	0/0:29,1:22:3.56:0,4,380	0/0:20,0:11:0.29:0,0,64	0/0:23,0:23:36.36:0,36,607	0/1:15,0:14:4.92:5,0,401	0/0:15,0:15:39.35:0,39,449	0/1:12,0:12:67.48:75,0,67	0/1:21,0:21:79.81:80,0,111	0/0:20,0:20:33.86:0,34,632	0/0:22,0:22:13.17:0,13,606	0/0:14,0:14:39.15:0,39,504	0/0:20,0:20:47.10:0,47,717	0/0:14,0:14:13.16:0,13,327	0/0:21,0:20:56.26:0,56,623	0/0:9,0:8:24.06:0,24,330	0/0:29,0:29:81.13:0,81,964	0/1:22,2:24:90.09:153,0,90	0/1:16,0:16:26.55:27,0,109	0/1:14,0:14:64.85:65,0,95	0/1:10,1:11:22.51:74,0,23	0/0:11,0:11:28.02:0,28,239	0/0:16,0:16:36.30:0,36,543	0/0:18,0:18:46.42:0,46,471	0/0:14,0:14:35.26:0,35,385	0/1:27,0:27:69.04:69,0,214	0/1:29,0:29:61.99:111,0,62	1/1:11,0:11:25.72:139,26,0
chr10	99974737	.	ATGTG	A	561.69	PASS	AB=0.949;AC=18;AF=0.360;AN=50;BaseQRankSum=0.612;DP=537;FS=5.653;HRun=0;HaplotypeScore=116.5020;InbreedingCoeff=0.2990;MQ=53.60;MQ0=30;MQRankSum=-0.940;QD=2.70;ReadPosRankSum=0.448;VQSLOD=1.1703;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:4,0:6:0.47:1,0,0	./.	./.	1/1:14,8:23:8.84:74,9,0	1/1:4,6:10:8.89:139,9,0	0/0:17,5:21:2.96:0,3,19	0/0:25,0:25:0:0,0,0	0/0:19,0:17:16.99:0,17,294	0/1:21,0:21:32.51:33,0,66	0/0:15,0:15:19.89:0,20,337	0/0:20,0:20:11.97:0,12,228	0/1:10,0:13:6.01:6,0,76	0/1:13,1:14:61.04:67,0,61	1/1:13,6:19:9.03:139,9,0	1/1:9,5:13:8.69:108,9,0	1/1:19,7:23:6.49:93,6,0	0/0:16,0:14:6.69:0,7,46	0/0:15,0:13:1.82:0,2,5	0/0:23,0:20:2.97:0,3,20	0/0:22,0:15:5.78:0,6,44	0/0:16,0:20:8.77:0,9,145	0/0:15,0:15:11.83:0,12,219	0/0:23,0:22:27.04:0,27,521	0/1:20,0:19:23.05:23,0,295	0/1:17,0:17:14.77:27,0,15	0/1:23,0:21:0.13:0,0,0	0/0:12,0:10:1.82:0,2,5
chr10	99974768	.	TG	T	618.98	PASS	AB=0.772;AC=9;AF=0.161;AN=56;BaseQRankSum=-0.579;DP=472;FS=0.784;HRun=1;HaplotypeScore=126.3506;InbreedingCoeff=0.0163;MQ=41.62;MQ0=49;MQRankSum=-3.419;QD=4.84;ReadPosRankSum=-1.962;VQSLOD=-0.3734;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:24:8.88:0,9,86	0/0:8,0:8:12.04:0,12,148	0/0:19,0:2:5.60:0,6,36	0/0:23,0:3:6.02:0,6,75	0/0:20,0:19:23.70:0,24,270	0/0:13,0:13:7.22:0,7,50	0/1:19,0:18:17.67:18,0,136	0/1:19,4:20:99:144,0,429	0/0:23,0:19:23.56:0,24,308	0/0:16,0:16:47.79:0,48,568	0/0:14,0:13:31.68:0,32,407	0/0:15,0:15:30.10:0,30,411	0/0:14,0:14:19.49:0,19,206	0/0:11,0:11:15.51:0,16,171	0/0:16,0:15:15.78:0,16,161	0/0:12,0:10:14.99:0,15,146	0/0:29,0:25:39.38:0,39,455	0/0:13,0:10:21.07:0,21,279	0/1:4,3:5:65.03:65,0,96	0/1:12,5:14:51.13:167,0,51	1/1:17,5:14:11.32:137,11,0	0/0:16,0:16:14.26:0,14,178	0/0:11,0:10:14.26:0,14,190	0/0:25,0:24:44.82:0,45,630	0/0:16,0:15:30.25:0,30,394	0/1:12,3:14:99:111,0,277	0/1:6,8:11:49.57:50,0,63	0/1:4,7:9:28.63:71,0,29
chr10	99974828	.	GA	G	3761.23	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-1.103;DP=447;FS=0.897;HRun=1;HaplotypeScore=201.2679;InbreedingCoeff=0.9418;MQ=91.27;MQ0=0;MQRankSum=-3.457;QD=40.01;ReadPosRankSum=-0.804;VQSLOD=2.9925;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:66.23:0,66,1051	0/0:4,0:4:12.04:0,12,191	0/0:29,0:29:75.58:0,76,1230	0/0:24,0:24:72.24:0,72,1112	0/0:15,0:14:45.15:0,45,687	0/0:12,0:12:36.12:0,36,574	0/0:26,0:26:75.25:0,75,1181	1/1:0,20:20:60.20:830,60,0	0/0:20,0:20:54.18:0,54,858	0/0:15,0:15:45.06:0,45,660	0/0:3,0:3:6.02:0,6,95	0/0:8,0:8:24.05:0,24,338	0/0:15,0:15:42.14:0,42,667	0/0:28,0:28:84.29:0,84,1323	0/0:24,0:24:72.23:0,72,1124	0/0:19,0:18:54.17:0,54,819	0/0:9,0:8:24.08:0,24,382	0/0:18,0:17:47.99:0,48,705	1/1:0,10:10:27.09:377,27,0	1/1:0,12:12:36.12:499,36,0	1/1:0,17:17:45.15:603,45,0	0/0:10,0:10:27.09:0,27,430	0/0:9,0:9:24.08:0,24,380	0/0:18,0:18:32.79:0,33,520	0/0:18,0:18:51.17:0,51,793	1/1:0,18:18:54.18:750,54,0	1/1:0,16:16:48.16:660,48,0	1/1:0,1:1:3.01:42,3,0
chr10	99975310	.	G	GA	3861.24	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=0.841;DP=524;FS=4.914;HRun=7;HaplotypeScore=89.9046;InbreedingCoeff=0.8879;MQ=80.95;MQ0=0;MQRankSum=-8.661;QD=22.32;ReadPosRankSum=-2.937;VQSLOD=2.2753;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,23:31:57.07:653,57,0	0/0:14,0:14:36.05:0,36,347	0/0:28,0:25:20.62:0,21,204	0/1:25,0:13:18.20:18,0,120	0/0:15,0:15:45.04:0,45,425	0/0:14,0:14:39.06:0,39,376	0/0:11,0:11:33.04:0,33,314	1/1:8,14:21:51.96:576,52,0	0/0:17,0:17:9.24:0,9,18	0/0:18,0:18:30.04:0,30,290	0/0:15,0:15:39.05:0,39,371	0/0:20,0:20:56.88:0,57,533	0/0:24,0:24:63.08:0,63,602	0/0:17,0:17:45.07:0,45,433	0/0:24,0:24:63.08:0,63,597	0/0:20,0:20:57.08:0,57,545	0/0:30,0:30:78.08:0,78,741	0/0:15,0:15:10.63:0,11,21	1/1:8,9:16:34.86:373,35,0	1/1:3,4:7:9.03:106,9,0	1/1:1,7:8:15:165,15,0	0/0:20,0:20:45.07:0,45,433	0/0:7,0:7:20.85:0,21,181	0/0:24,0:24:68.32:0,68,644	0/0:18,0:18:47.95:0,48,436	1/1:5,24:29:74.02:858,74,0	1/1:3,21:24:68.71:775,69,0	1/1:0,10:10:30.02:337,30,0
chr10	99975317	.	AT	A	987.89	PASS	AB=0.926;AC=5;AF=0.089;AN=56;BaseQRankSum=5.109;DP=512;FS=1.359;HRun=1;HaplotypeScore=88.6807;InbreedingCoeff=0.7177;MQ=73.64;MQ0=1;MQRankSum=-1.776;QD=18.29;ReadPosRankSum=-1.584;VQSLOD=3.4476;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:65.48:0,65,407	0/0:13,0:13:39.13:0,39,549	0/0:21,1:19:21.34:0,21,301	0/1:23,2:12:24.80:25,0,165	0/0:17,0:17:51.11:0,51,641	0/0:15,0:15:39.13:0,39,555	0/0:12,0:12:36.11:0,36,497	0/0:26,0:25:57.77:0,58,386	1/1:2,13:15:45.13:593,45,0	0/0:14,0:14:38.71:0,39,506	0/0:16,0:16:48.05:0,48,602	0/0:20,0:20:60:0,60,772	0/0:22,0:22:66.21:0,66,906	0/0:16,0:16:46.37:0,46,593	0/0:23,0:23:69.19:0,69,913	0/0:22,0:22:65.79:0,66,889	0/0:30,0:30:88.13:0,88,1184	1/1:0,14:14:36.12:499,36,0	0/0:16,0:15:43.33:0,43,320	0/0:6,0:6:16.72:0,17,126	0/0:9,0:9:3.62:0,4,126	0/0:15,1:16:45.14:0,45,597	0/0:8,0:8:13.76:0,14,262	0/0:25,0:25:74.82:0,75,1010	0/0:17,1:18:53.23:0,53,667	0/0:25,0:26:49.31:0,49,347	0/0:26,0:26:67.97:0,68,370	0/0:11,0:11:28.37:0,28,158
chr10	99976005	.	C	CT	2719.78	PASS	AB=0.847;AC=19;AF=0.339;AN=56;BaseQRankSum=4.329;DP=555;FS=0.000;HRun=10;HaplotypeScore=71.1737;InbreedingCoeff=0.5558;MQ=69.13;MQ0=5;MQRankSum=-1.097;QD=10.84;ReadPosRankSum=-2.049;VQSLOD=2.5000;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,3:27:25.66:400,26,0	0/0:2,0:2:5.99:0,6,49	0/0:25,0:13:7.24:0,7,104	0/1:27,0:19:6.27:6,0,132	0/0:20,0:20:45.79:0,46,368	0/1:20,3:23:7.02:7,0,362	0/0:14,0:14:38.63:0,39,307	1/1:18,9:25:45.92:441,46,0	1/1:10,0:11:2.53:14,3,0	0/0:21,0:21:44.92:0,45,369	0/0:15,0:15:32.95:0,33,271	0/0:14,0:14:35.94:0,36,295	0/0:18,0:18:44.82:0,45,359	0/0:19,1:19:9.88:0,10,282	0/0:23,0:25:55:0,55,430	0/0:17,0:17:44.94:0,45,369	0/0:36,1:38:59.93:0,60,688	1/1:13,0:13:1.05:12,1,0	0/1:19,7:25:7.16:293,0,7	1/1:18,7:26:15.83:354,16,0	0/1:4,1:5:14.38:57,0,14	0/0:16,0:16:32.95:0,33,271	0/0:15,0:15:29.95:0,30,246	0/0:28,0:28:65.89:0,66,538	0/0:14,1:16:9:0,9,269	0/1:15,9:23:4.19:363,0,4	1/1:19,9:28:68.96:672,69,0	1/1:7,6:13:27.07:288,27,0
chr10	99976031	.	TC	T	2965.39	PASS	AB=0.978;AC=17;AF=0.304;AN=56;BaseQRankSum=8.875;DP=513;FS=9.112;HRun=3;HaplotypeScore=56.1489;InbreedingCoeff=0.9187;MQ=53.72;MQ0=17;MQRankSum=-6.222;QD=16.03;ReadPosRankSum=-1.587;VQSLOD=2.0315;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,13:26:38.31:435,38,0	0/0:5,0:5:12.03:0,12,148	0/1:43,0:7:3.80:4,0,83	0/0:34,1:10:11:0,11,110	0/0:25,0:25:72.13:0,72,874	0/0:15,0:15:39.07:0,39,499	0/0:14,0:14:42.07:0,42,495	1/1:5,14:18:41.98:455,42,0	0/0:1,0:9:23.05:0,23,142	0/0:17,0:16:39.11:0,39,508	0/0:16,0:15:42.09:0,42,515	0/0:14,0:14:42.10:0,42,528	0/0:12,0:12:33.10:0,33,436	0/0:17,0:16:45.08:0,45,536	0/0:19,0:18:54.16:0,54,713	0/0:13,0:13:39.12:0,39,521	0/0:38,0:38:99:0,100,1315	0/0:2,0:7:11.52:0,12,66	1/1:11,8:18:38.97:397,39,0	1/1:9,10:19:36.05:414,36,0	1/1:7,3:10:18:184,18,0	0/0:17,0:17:45.13:0,45,589	0/0:13,0:13:33.02:0,33,398	0/0:21,0:21:57.16:0,57,751	0/0:19,0:19:54.13:0,54,690	1/1:5,9:13:33.09:387,33,0	1/1:11,11:22:63.12:738,63,0	1/1:7,3:10:14.99:156,15,0
chr10	99976098	.	TC	T	866.22	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.393;DP=585;FS=2.474;HRun=5;HaplotypeScore=58.2331;InbreedingCoeff=0.9982;MQ=62.22;MQ0=12;MQRankSum=-0.415;QD=27.07;ReadPosRankSum=1.292;VQSLOD=3.6996;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.21:0,63,855	0/0:8,0:8:24.08:0,24,328	0/0:28,1:13:36.10:0,36,441	0/0:37,2:20:60.14:0,60,777	0/0:34,0:34:99:0,99,1331	0/0:16,0:16:45.15:0,45,615	0/0:29,0:29:78.26:0,78,1064	0/0:22,0:22:63.21:0,63,855	1/1:0,15:15:45.13:510,45,0	0/0:19,0:18:51.15:0,51,698	0/0:15,0:15:42.12:0,42,544	0/0:17,0:17:51.14:0,51,658	0/0:14,0:14:36.12:0,36,488	0/0:15,0:15:42.11:0,42,541	0/0:17,0:17:51.17:0,51,698	0/0:10,0:10:27.08:0,27,353	0/0:47,0:47:99:0,126,1720	1/1:4,13:16:43.01:478,43,0	0/0:20,0:20:54.14:0,54,715	0/0:18,0:18:45.15:0,45,603	0/0:22,0:22:57.19:0,57,773	0/0:17,0:17:51.14:0,51,663	0/0:15,0:15:42.14:0,42,573	0/0:19,0:19:54.11:0,54,682	0/0:30,0:30:87.28:0,87,1178	0/0:20,0:20:57.19:0,57,779	0/0:22,0:22:60.18:0,60,796	0/0:15,0:15:45.15:0,45,615
chr10	99976390	.	TAAGA	T	2564.02	PASS	AB=0.890;AC=16;AF=0.308;AN=52;BaseQRankSum=6.764;DP=606;FS=5.709;HRun=0;HaplotypeScore=104.8269;InbreedingCoeff=0.6085;MQ=74.60;MQ0=1;MQRankSum=1.519;QD=12.51;ReadPosRankSum=0.473;VQSLOD=2.9548;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:43:54.17:0,54,934	0/0:4,0:10:12.51:0,13,180	./.	./.	0/0:29,1:29:12.97:0,13,1198	0/0:36,0:36:54.56:0,55,1448	0/1:21,0:21:10.29:10,0,639	1/1:18,4:21:12.04:179,12,0	0/0:7,0:16:5.89:0,6,103	0/0:19,0:19:42.14:0,42,958	0/0:19,0:19:39.13:0,39,887	0/0:26,0:26:54.19:0,54,1264	0/1:23,1:24:14.13:14,0,640	0/0:19,0:19:39.13:0,39,905	0/0:9,0:14:12.03:0,12,183	0/0:10,0:10:12.04:0,12,267	0/0:28,0:28:60.21:0,60,1323	0/0:7,0:17:9:0,9,113	1/1:11,7:19:24.06:335,24,0	1/1:5,10:15:21.07:327,21,0	1/1:6,10:17:18.06:265,18,0	0/1:19,1:20:5.09:5,0,844	0/0:7,0:22:35.76:0,36,619	0/0:9,0:27:42.14:0,42,729	0/0:27,1:28:9.96:0,10,1196	0/1:10,12:22:99:475,0,101	1/1:9,19:28:52.39:806,52,0	1/1:5,12:17:21.07:331,21,0
chr10	99976673	.	TTGTG	T	114.85	PASS	AB=0.857;AC=5;AF=0.093;AN=54;BaseQRankSum=3.247;DP=693;FS=12.718;HRun=0;HaplotypeScore=114.8352;InbreedingCoeff=0.2451;MQ=69.14;MQ0=18;MQRankSum=-0.211;QD=1.03;ReadPosRankSum=-0.244;VQSLOD=1.5980;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:34:6.01:56,6,0	0/0:6,0:6:6.02:0,6,105	./.	0/0:33,0:23:0.47:0,0,1	0/0:18,0:18:20.81:0,21,379	0/1:22,2:24:60.74:61,0,497	0/0:32,0:30:41.63:0,42,781	0/0:18,0:17:9.50:0,9,110	0/0:23,0:22:36.59:0,37,750	0/0:36,0:35:33.67:0,34,639	0/0:14,0:13:15.05:0,15,339	0/0:19,0:19:27.08:0,27,622	0/0:18,0:18:26.82:0,27,474	0/0:29,0:29:29.84:0,30,577	0/1:23,1:25:16.70:17,0,553	0/0:25,0:26:38.85:0,39,786	0/0:34,0:36:32.85:0,33,668	0/0:36,0:37:28.21:0,28,1319	0/0:27,0:23:6.49:0,6,129	0/0:13,0:13:12.04:0,12,240	0/0:26,0:26:20.96:0,21,453	0/0:20,0:21:26.82:0,27,471	0/0:9,0:10:14.79:0,15,267	0/0:39,0:38:16.05:0,16,1010	0/1:17,9:28:28.04:94,0,28	0/0:29,0:28:14.78:0,15,206	0/0:31,0:29:36.06:0,36,644	0/0:7,0:6:6.02:0,6,123
chr10	99977395	.	A	AAT	2583.47	PASS	AB=0.576;AC=9;AF=0.161;AN=56;BaseQRankSum=11.620;DP=763;FS=9.150;HRun=0;HaplotypeScore=106.2379;InbreedingCoeff=0.3058;MQ=61.80;MQ0=5;MQRankSum=-0.343;QD=11.33;ReadPosRankSum=2.157;VQSLOD=3.0097;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:45:57.82:0,58,157	0/0:16,0:16:48.12:0,48,680	0/0:29,0:18:41:0,41,627	0/0:34,0:24:68.45:0,68,839	0/0:27,0:27:81.18:0,81,1167	0/0:25,0:25:71.72:0,72,1078	0/0:27,0:27:76.10:0,76,1137	0/1:13,0:48:99:499,0,182	0/0:3,0:23:32.26:0,32,129	0/0:14,0:14:39.11:0,39,549	0/0:29,0:29:84.23:0,84,1256	0/0:22,0:22:66.23:0,66,1059	0/0:20,0:20:60.17:0,60,898	0/0:21,0:21:60.18:0,60,940	0/0:26,0:26:74.69:0,75,1075	0/0:25,0:25:72.20:0,72,1077	0/0:26,0:26:78.25:0,78,1226	0/0:3,0:19:29.31:0,29,110	0/1:8,0:28:99:272,0,119	0/1:4,0:31:20.79:434,0,21	1/1:2,0:38:42.08:568,42,0	0/0:27,0:27:81.24:0,81,1233	0/0:23,0:23:69.20:0,69,1035	0/0:33,0:32:93.24:0,93,1359	0/0:23,0:22:69.08:0,69,991	0/1:5,0:30:85.01:381,0,85	1/1:4,1:33:6.80:457,7,0	0/1:8,0:18:99:120,0,156
chr10	99978955	.	TC	T	3183.22	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=17.360;DP=540;FS=2.005;HRun=1;HaplotypeScore=135.4648;InbreedingCoeff=0.9691;MQ=80.15;MQ0=0;MQRankSum=-16.988;QD=19.18;ReadPosRankSum=2.505;VQSLOD=4.0820;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:63.88:462,64,0	0/0:9,0:9:27.09:0,27,431	0/0:18,0:18:54.15:0,54,784	0/0:14,0:14:39.13:0,39,605	0/0:31,0:31:93.30:0,93,1453	0/0:30,0:30:87.27:0,87,1344	0/0:13,0:13:39.13:0,39,623	1/1:5,18:23:63.25:487,63,0	1/1:0,18:18:53.72:398,54,0	0/0:32,0:32:96.31:0,96,1493	0/0:24,0:24:72.22:0,72,1104	0/0:16,0:16:45.15:0,45,715	0/0:26,0:26:78.23:0,78,1194	0/0:13,0:13:36.12:0,36,572	0/0:22,0:22:66.23:0,66,1050	0/0:19,0:19:57.19:0,57,909	0/0:20,0:20:60.20:0,60,959	1/1:1,1:2:2.99:23,3,0	1/1:4,10:14:38.77:294,39,0	1/1:0,26:29:77.39:560,77,0	1/1:1,7:8:20.86:151,21,0	0/0:20,0:20:60.16:0,60,888	0/0:27,0:27:81.25:0,81,1270	0/0:24,0:24:72.23:0,72,1127	0/0:16,0:15:48.14:0,48,722	1/1:1,17:18:50.74:376,51,0	1/1:1,24:25:74.43:556,74,0	1/1:1,4:5:12.84:93,13,0
chr10	99978957	.	TAATTAATTAAC	T	13517.79	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=17.759;DP=536;FS=2.495;HRun=0;HaplotypeScore=212.6192;InbreedingCoeff=0.9678;MQ=81.72;MQ0=0;MQRankSum=-17.250;QD=85.02;ReadPosRankSum=3.262;VQSLOD=4.8759;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:60.21:1838,60,0	0/0:9,0:9:27.09:0,27,1554	0/0:18,0:18:54.19:0,54,2509	0/0:16,0:16:48.16:0,48,2242	0/0:31,0:31:93.32:0,93,5229	0/0:29,0:29:84.29:0,84,4808	0/0:13,0:13:39.13:0,39,2245	1/1:3,18:21:62.87:1733,63,0	1/1:0,18:18:54.19:1656,54,0	0/0:29,0:29:87.30:0,87,5004	0/0:26,0:26:78.25:0,78,4265	0/0:17,0:17:48.15:0,48,2642	0/0:27,0:27:81.26:0,81,4345	0/0:14,0:14:42.14:0,42,2300	0/0:22,0:22:66.21:0,66,3565	0/0:18,0:18:54.19:0,54,3116	0/0:20,0:20:60.21:0,60,3273	1/1:1,1:2:3.01:93,3,0	1/1:2,10:12:35.91:1022,36,0	1/1:3,26:29:78.27:2378,78,0	1/1:1,7:8:18.06:551,18,0	0/0:21,0:21:63.22:0,63,3736	0/0:26,0:26:78.27:0,78,4176	0/0:24,0:24:72.25:0,72,4270	0/0:17,0:16:51.18:0,51,2788	1/1:1,17:18:53.97:1579,54,0	1/1:0,24:25:75.26:2297,75,0	1/1:0,4:4:12.04:371,12,0
chr10	99979574	.	T	TA	9310.06	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-3.321;DP=638;FS=0.306;HRun=2;HaplotypeScore=69.2187;InbreedingCoeff=0.9998;MQ=73.96;MQ0=0;MQRankSum=-0.470;QD=39.12;ReadPosRankSum=0.609;VQSLOD=5.1894;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:84.28:1209,84,0	0/0:10,0:10:30.09:0,30,372	0/0:30,0:28:70.40:0,70,807	0/0:27,0:25:53.36:0,53,618	0/0:30,0:30:90.28:0,90,1105	0/0:22,0:22:66.19:0,66,804	0/0:19,0:19:54.11:0,54,619	1/1:0,29:29:87.17:1207,87,0	1/1:2,19:21:57.19:821,57,0	0/0:34,0:34:99:0,102,1259	0/0:24,0:24:69.20:0,69,833	0/0:15,0:15:45.14:0,45,558	0/0:22,0:22:66.18:0,66,803	0/0:22,0:22:63.17:0,63,756	0/0:26,0:26:78.23:0,78,954	0/0:27,0:27:75.23:0,75,929	0/0:17,0:17:45.14:0,45,557	1/1:1,19:20:45.08:622,45,0	1/1:3,18:21:54.16:743,54,0	1/1:1,36:37:99:1524,108,0	1/1:0,22:22:63.21:907,63,0	0/0:20,0:20:57.16:0,57,691	0/0:24,0:24:66.20:0,66,808	0/0:14,0:14:42.08:0,42,491	0/0:17,0:17:51.16:0,51,632	1/1:2,16:19:51.13:678,51,0	1/1:0,31:31:84.28:1209,84,0	1/1:0,9:9:27.09:389,27,0
chr10	99980140	.	GC	G	3764.10	PASS	AB=0.538;AC=15;AF=0.268;AN=56;BaseQRankSum=12.139;DP=617;FS=5.183;HRun=8;HaplotypeScore=69.4289;InbreedingCoeff=0.9115;MQ=84.72;MQ0=0;MQRankSum=-1.769;QD=22.41;ReadPosRankSum=0.001;VQSLOD=4.1106;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:22:42.06:406,42,0	0/0:14,0:14:42.13:0,42,507	0/0:27,1:27:55.34:0,55,730	0/0:24,0:24:47.22:0,47,511	0/0:23,0:23:63.19:0,63,760	0/0:23,0:23:60.16:0,60,702	0/0:24,0:24:66.15:0,66,759	1/1:7,23:30:69.07:655,69,0	0/0:22,0:22:60.17:0,60,713	0/0:18,0:18:36.11:0,36,435	0/0:23,0:23:63.19:0,63,761	0/0:20,0:20:60.18:0,60,725	0/0:18,0:18:51.14:0,51,604	0/0:12,0:12:33.10:0,33,397	0/0:20,0:20:54.14:0,54,622	0/0:26,0:26:72.20:0,72,856	0/0:28,1:29:58.28:0,58,975	0/0:16,0:16:36.11:0,36,435	1/1:3,11:14:33.05:319,33,0	1/1:3,19:22:54.01:508,54,0	1/1:3,12:15:33.05:319,33,0	0/0:26,0:26:72.21:0,72,857	0/0:29,0:29:75.23:0,75,905	0/0:27,0:29:77.90:0,78,886	0/0:25,0:25:75.22:0,75,896	1/1:0,28:28:84.09:797,84,0	1/1:2,28:30:63.05:608,63,0	0/1:1,6:7:15.20:153,0,15
chr10	99981108	.	CT	C	587.06	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.690;DP=672;FS=3.117;HRun=4;HaplotypeScore=76.6392;InbreedingCoeff=0.9979;MQ=81.99;MQ0=0;MQRankSum=-3.806;QD=27.96;ReadPosRankSum=2.747;VQSLOD=3.4391;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:57.17:682,57,0	0/0:14,0:14:39.13:0,39,536	0/0:20,0:20:56.64:0,57,673	0/0:21,0:21:51.08:0,51,617	0/0:36,0:36:99:0,105,1387	0/0:23,0:23:60.19:0,60,811	0/0:18,0:18:51.13:0,51,655	0/0:34,0:34:99:0,99,1254	0/0:27,0:27:78.23:0,78,1029	0/0:27,0:27:69.69:0,70,939	0/0:29,0:29:80.91:0,81,1045	0/0:21,0:21:63.19:0,63,839	0/0:25,0:25:75.25:0,75,1034	0/0:21,0:21:57.18:0,57,770	0/0:27,0:27:78.22:0,78,1028	0/0:23,0:23:66.19:0,66,866	0/0:20,0:20:54.16:0,54,727	0/0:24,0:24:66.17:0,66,858	0/0:26,0:26:75.20:0,75,950	0/0:30,0:30:87.26:0,87,1153	0/0:34,0:34:96.29:0,96,1292	0/0:26,0:26:75.23:0,75,1003	0/0:32,0:32:96.27:0,96,1271	0/0:17,0:17:45.15:0,45,619	0/0:23,0:23:69.21:0,69,921	0/0:26,0:26:78.25:0,78,1050	0/0:19,0:19:57.18:0,57,768	0/0:8,0:8:24.07:0,24,315
chr10	99982034	.	GTTAGCACGGA	G	13311.87	PASS	AB=0.525;AC=19;AF=0.339;AN=56;BaseQRankSum=16.592;DP=677;FS=2.506;HRun=0;HaplotypeScore=209.4072;InbreedingCoeff=0.9004;MQ=90.17;MQ0=0;MQRankSum=-15.127;QD=66.23;ReadPosRankSum=3.399;VQSLOD=4.9207;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:30:54.19:1785,54,0	0/0:13,0:13:39.13:0,39,2008	0/0:32,0:32:87.03:0,87,3583	0/0:29,0:29:79.15:0,79,3190	0/0:15,0:15:45.15:0,45,2296	0/0:28,0:28:84.29:0,84,4090	0/0:32,0:32:90.31:0,90,4450	1/1:6,18:24:54.16:1405,54,0	1/1:0,17:17:48.16:1628,48,0	0/0:30,0:30:87.30:0,87,4267	0/0:28,0:28:84.29:0,84,4384	0/0:31,0:31:93.32:0,93,4769	0/0:22,0:22:66.21:0,66,3148	0/0:24,0:24:72.25:0,72,3433	0/0:28,0:28:84.29:0,84,4510	0/0:27,0:27:78.27:0,78,3659	0/0:33,0:33:93.32:0,93,4854	1/1:5,16:21:33.11:1120,33,0	1/1:1,16:17:48.16:1488,48,0	1/1:0,16:17:33.11:1119,33,0	1/1:3,8:11:5.35:203,5,0	0/0:23,0:23:69.23:0,69,3347	0/0:25,0:25:66.23:0,66,3348	0/0:33,0:33:99:0,99,5011	0/0:23,0:23:66.23:0,66,3429	0/1:3,28:31:80.71:2428,0,81	1/1:1,26:27:45.15:1525,45,0	1/1:0,6:6:18.06:611,18,0
chr10	99982973	.	GTTT	G	2592.95	PASS	AB=0.845;AC=16;AF=0.286;AN=56;BaseQRankSum=5.514;DP=638;FS=11.364;HRun=12;HaplotypeScore=111.4239;InbreedingCoeff=0.5434;MQ=67.88;MQ0=10;MQRankSum=-3.519;QD=12.84;ReadPosRankSum=2.748;VQSLOD=0.9072;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,7:27:80.72:300,0,81	0/0:7,0:9:24.08:0,24,439	0/0:37,0:14:2.14:0,2,115	0/0:24,0:9:8.81:0,9,84	0/0:32,0:35:78.21:0,78,1341	0/0:31,0:32:75.24:0,75,1384	0/0:14,0:16:36.08:0,36,596	1/1:28,3:33:1.42:292,1,0	1/1:20,3:23:42.50:502,43,0	0/0:23,0:26:66.14:0,66,1052	0/0:28,0:27:75.16:0,75,1317	0/0:17,0:18:51.17:0,51,901	0/0:23,0:23:59.86:0,60,1018	0/0:26,0:26:75.18:0,75,1173	0/0:33,0:35:83.82:0,84,1348	0/0:20,0:20:57.10:0,57,942	0/0:20,0:20:53.63:0,54,805	1/1:11,2:13:24:249,24,0	1/1:17,0:16:7.34:185,7,0	0/1:18,3:21:67.48:283,0,67	1/1:7,2:9:9.08:129,9,0	0/0:18,0:18:42.14:0,42,797	0/0:33,0:33:75.08:0,75,1299	0/0:14,0:14:33.11:0,33,644	0/0:21,0:21:53.80:0,54,864	0/1:21,1:23:99:179,0,211	1/1:14,3:17:21.84:349,22,0	0/1:13,5:18:18.89:308,0,19
chr10	99982988	.	TC	T	1034.92	PASS	AB=0.992;AC=16;AF=0.286;AN=56;BaseQRankSum=13.169;DP=646;FS=0.359;HRun=1;HaplotypeScore=100.5233;InbreedingCoeff=0.2688;MQ=59.25;MQ0=11;MQRankSum=-5.953;QD=3.88;ReadPosRankSum=-0.330;VQSLOD=-0.0300;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:9.60:116,0,10	0/0:9,0:9:23.89:0,24,261	0/1:37,0:9:9.92:41,0,10	0/0:23,1:7:1.97:0,2,45	0/0:30,0:30:33.67:0,34,589	0/0:31,0:31:67.57:0,68,831	0/0:14,0:14:25.74:0,26,349	0/1:27,2:29:42.85:164,0,43	0/1:29,0:29:24.80:101,0,25	0/0:25,0:25:45.49:0,45,596	0/0:29,0:28:35.93:0,36,534	0/0:23,0:23:43.66:0,44,564	0/0:26,1:27:42.27:0,42,665	0/0:27,0:27:24.19:0,24,617	0/0:35,1:36:23.35:0,23,823	0/0:17,0:17:42.77:0,43,431	0/1:20,0:20:21.66:22,0,346	1/1:16,0:14:19.88:101,20,0	1/1:12,0:11:1.47:67,1,0	1/1:26,0:26:24.62:178,25,0	0/1:10,0:10:8.58:19,0,9	0/0:18,0:18:53.86:0,54,596	0/0:29,8:36:56.52:0,57,876	0/0:14,0:14:39.92:0,40,423	0/0:18,0:18:14.78:0,15,407	0/1:25,0:25:22.93:208,0,23	1/1:20,0:20:29.44:171,29,0	0/1:14,0:14:12.18:23,0,12
chr10	99983001	.	T	TA	2656.86	PASS	AB=0.971;AC=21;AF=0.375;AN=56;BaseQRankSum=10.128;DP=606;FS=0.859;HRun=2;HaplotypeScore=93.5158;InbreedingCoeff=0.8890;MQ=68.12;MQ0=6;MQRankSum=-5.339;QD=11.31;ReadPosRankSum=-0.178;VQSLOD=1.7659;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:22:22.33:334,22,0	0/0:11,0:11:21.05:0,21,246	0/1:32,1:13:30.97:31,0,83	0/0:25,0:10:17.95:0,18,167	0/0:31,0:32:74.98:0,75,744	0/0:27,0:27:66.17:0,66,723	0/0:14,0:14:33.05:0,33,353	1/1:6,4:31:49.37:460,49,0	1/1:5,18:29:29.09:322,29,0	0/0:18,0:18:48.09:0,48,523	0/0:25,0:24:62.88:0,63,598	0/0:19,0:19:39.06:0,39,461	0/0:27,0:27:68.98:0,69,755	0/0:23,0:23:56.99:0,57,623	0/0:29,0:29:71.91:0,72,809	0/0:14,0:14:33.05:0,33,360	0/0:17,0:17:48.08:0,48,535	1/1:1,12:14:17.98:186,18,0	1/1:5,7:15:27.78:247,28,0	1/1:4,18:25:24.09:433,24,0	1/1:0,1:9:2.92:17,3,0	0/0:19,0:19:51.11:0,51,580	0/0:35,0:35:71.72:0,72,767	0/0:15,0:15:45:0,45,488	0/0:21,0:21:60.03:0,60,624	1/1:18,4:25:19.02:523,19,0	1/1:0,19:20:15:176,15,0	1/1:5,2:9:17.61:143,18,0
chr10	99983411	.	CCTTT	C	7995.93	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.654;DP=617;FS=25.735;HRun=0;HaplotypeScore=117.6338;InbreedingCoeff=0.9992;MQ=85.58;MQ0=0;MQRankSum=-9.902;QD=43.69;ReadPosRankSum=-1.123;VQSLOD=3.1823;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:57.15:1002,57,0	0/0:10,0:10:30.10:0,30,785	0/0:22,0:22:48.72:0,49,1079	0/0:23,0:23:54.15:0,54,1161	0/0:25,0:25:72.25:0,72,1870	0/0:21,0:21:60.21:0,60,1535	0/0:26,0:26:66.18:0,66,1605	1/1:5,39:43:99:1956,111,0	0/0:23,0:23:66.23:0,66,1720	0/0:28,0:28:81.28:0,81,2097	0/0:20,0:20:54.19:0,54,1374	0/0:19,0:19:57.20:0,57,1464	0/0:27,0:27:72.25:0,72,1841	0/0:30,0:30:81.27:0,81,2069	0/0:20,0:20:60.21:0,60,1558	0/0:17,0:17:51.18:0,51,1335	0/0:15,0:15:42.14:0,42,1098	0/0:14,0:14:42.14:0,42,1083	1/1:3,13:16:39.09:621,39,0	1/1:0,17:17:48.16:872,48,0	1/1:1,12:13:21.07:382,21,0	0/0:24,0:24:63.22:0,63,1641	0/0:20,0:20:57.20:0,57,1493	0/0:21,0:21:51.18:0,51,1316	0/0:29,0:29:72.14:0,72,1872	1/1:3,20:23:60.21:1091,60,0	1/1:2,24:26:72.25:1309,72,0	1/1:2,17:19:42.14:763,42,0
chr10	99983446	.	G	GTTT	797.56	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=3.893;DP=603;FS=0.000;HRun=9;HaplotypeScore=148.6429;InbreedingCoeff=0.7439;MQ=74.74;MQ0=13;MQRankSum=-5.855;QD=16.97;ReadPosRankSum=-4.478;VQSLOD=-0.3710;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:15.04:0,15,323	0/0:11,0:12:23.51:0,24,257	0/0:36,0:16:12.30:0,12,141	0/0:32,0:23:21.07:0,21,203	0/0:28,0:27:43.41:0,43,516	0/0:24,0:23:12.43:0,12,426	0/0:26,0:26:35.55:0,36,451	0/0:35,0:34:46.10:0,46,587	1/1:13,5:18:38.48:465,38,0	0/0:25,0:25:50.59:0,51,579	0/0:14,0:14:20.81:0,21,241	0/0:19,0:19:20.48:0,20,251	0/0:23,0:23:27.16:0,27,321	0/0:18,0:18:20.97:0,21,243	0/1:15,0:15:8.76:9,0,242	0/0:17,0:17:24.77:0,25,282	0/0:17,0:17:21:0,21,254	1/1:9,4:14:32.96:450,33,0	0/0:26,0:23:25.05:0,25,370	0/0:22,0:22:29.78:0,30,293	0/0:11,0:9:8.96:0,9,82	0/0:22,0:22:26.89:0,27,293	0/0:21,0:21:20.98:0,21,322	0/0:17,0:17:23.28:0,23,317	0/0:27,0:26:25.97:0,26,322	0/0:16,0:16:29.15:0,29,289	0/0:24,0:24:40.79:0,41,446	0/0:15,0:15:38:0,38,377
chr10	99983460	.	T	TTTTG	635.43	PASS	AB=0.864;AC=4;AF=0.071;AN=56;BaseQRankSum=4.376;DP=542;FS=21.100;HRun=0;HaplotypeScore=123.9132;InbreedingCoeff=-0.0505;MQ=70.42;MQ0=15;MQRankSum=-3.054;QD=7.22;ReadPosRankSum=3.692;VQSLOD=0.6376;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:28:73.97:179,0,74	0/0:9,0:9:24.85:0,25,271	0/0:44,0:17:6.62:0,7,91	0/1:30,0:19:0.45:0,0,103	0/0:24,0:23:59.97:0,60,695	0/0:21,0:20:50.41:0,50,526	0/0:24,0:24:60.95:0,61,634	0/0:29,0:28:12.87:0,13,219	0/1:10,8:18:27.25:278,0,27	0/0:26,0:26:64.42:0,64,883	0/0:12,0:12:34.86:0,35,406	0/0:18,0:18:45.78:0,46,475	0/0:15,0:15:39.74:0,40,381	0/0:15,0:15:36.04:0,36,451	0/0:15,0:15:29.34:0,29,290	0/0:13,0:13:19.80:0,20,365	0/0:17,0:17:32.95:0,33,378	0/1:9,3:12:12.84:278,0,13	0/0:23,0:19:31.99:0,32,228	0/0:15,0:15:18.52:0,19,134	0/0:7,0:5:7.29:0,7,40	0/0:14,0:14:33.04:0,33,438	0/0:20,0:20:51.92:0,52,512	0/0:19,0:19:47.14:0,47,440	0/0:23,0:22:38.50:0,39,477	0/0:14,0:14:19.60:0,20,163	0/0:22,0:22:14.83:0,15,221	0/0:15,0:15:20.29:0,20,107
chr10	99983462	.	T	TTTTG	3633.72	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=6.645;DP=533;FS=4.823;HRun=0;HaplotypeScore=109.8272;InbreedingCoeff=0.7783;MQ=69.98;MQ0=15;MQRankSum=-5.832;QD=19.97;ReadPosRankSum=4.680;VQSLOD=3.0246;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,18:29:32.29:833,32,0	0/0:9,0:9:21.86:0,22,242	0/0:43,0:16:10.37:0,10,105	0/0:29,0:19:1.86:0,2,111	0/0:22,0:21:56.93:0,57,658	0/0:20,0:19:47.42:0,47,503	0/0:23,0:23:63.56:0,64,646	1/1:25,1:25:58.88:601,59,0	0/1:19,0:19:45.13:120,0,45	0/0:25,0:25:67.47:0,67,906	0/0:12,0:12:34.84:0,35,398	0/0:17,0:17:45.79:0,46,470	0/0:15,0:15:36.35:0,36,356	0/0:15,0:15:36.03:0,36,443	0/0:15,0:15:29.19:0,29,288	0/0:13,0:13:19.63:0,20,365	0/0:17,0:17:32.95:0,33,371	0/1:12,0:12:32.31:94,0,32	1/1:22,0:18:14.82:322,15,0	1/1:16,0:16:40.52:404,41,0	1/1:8,0:6:7.22:54,7,0	0/0:14,0:14:33.04:0,33,431	0/0:20,0:20:51.75:0,52,502	0/0:19,0:19:44.06:0,44,416	0/0:22,0:21:38.49:0,38,466	1/1:14,0:14:13.95:272,14,0	1/1:22,0:22:58.72:564,59,0	1/1:14,0:14:41.51:370,42,0
chr10	99983463	.	T	TTTG	4216.02	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=4.772;DP=531;FS=4.820;HRun=0;HaplotypeScore=97.3814;InbreedingCoeff=0.7974;MQ=69.18;MQ0=15;MQRankSum=-7.009;QD=23.16;ReadPosRankSum=3.352;VQSLOD=4.6456;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:28.96:441,29,0	0/0:9,0:9:21.83:0,22,221	0/0:42,0:15:20.01:0,20,130	0/0:30,0:19:2.59:0,3,124	0/0:22,0:21:56.89:0,57,624	0/0:20,0:19:47.42:0,47,476	0/0:22,0:22:62.55:0,63,593	1/1:16,8:23:65.94:840,66,0	0/1:19,0:19:32.11:32,0,76	0/0:25,0:25:72.12:0,72,866	0/0:12,0:12:34.82:0,35,371	0/0:18,0:18:46.45:0,46,463	0/0:15,0:15:36.32:0,36,331	0/0:16,0:16:36.03:0,36,420	0/0:14,0:14:28.69:0,29,274	0/0:13,0:13:19.80:0,20,352	0/0:17,0:17:32.92:0,33,347	0/1:12,0:12:35.15:56,0,35	1/1:18,5:19:21.03:478,21,0	1/1:8,8:16:44.05:628,44,0	1/1:7,1:6:12:125,12,0	0/0:15,0:15:33:0,33,400	0/0:19,0:19:51.88:0,52,485	0/0:19,0:19:43.84:0,44,400	0/0:21,0:20:38.67:0,39,435	1/1:10,4:14:13.69:395,14,0	1/1:14,8:22:62.96:721,63,0	1/1:8,7:15:41.76:500,42,0
chr10	99983465	.	T	TG	1039.11	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=9.997;DP=524;FS=1.364;HRun=0;HaplotypeScore=88.5223;InbreedingCoeff=0.6222;MQ=68.38;MQ0=15;MQRankSum=-6.038;QD=6.88;ReadPosRankSum=3.418;VQSLOD=3.3054;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:8.47:99,0,8	0/0:8,0:8:20.67:0,21,185	0/0:39,0:13:16.43:0,16,113	0/0:28,0:18:1.12:0,1,159	0/0:22,0:21:57.04:0,57,594	0/0:19,0:18:45.73:0,46,420	0/0:22,0:22:63.29:0,63,562	1/1:23,0:22:5.64:239,6,0	0/0:19,0:19:28.25:0,28,201	0/0:25,0:25:71.09:0,71,789	0/0:13,0:13:34.09:0,34,326	0/0:18,0:18:50.67:0,51,459	0/0:14,0:14:34.94:0,35,315	0/0:16,0:16:39.02:0,39,411	0/0:14,0:14:32.94:0,33,299	0/0:13,0:13:37.55:0,38,361	0/0:17,0:17:34.50:0,34,333	0/0:12,0:12:13.86:0,14,150	0/1:22,0:18:43.34:100,0,43	1/1:14,2:16:17.95:149,18,0	0/1:9,0:7:17.31:17,0,33	0/0:15,0:15:40.86:0,41,436	0/0:19,0:19:51.60:0,52,499	0/0:18,0:18:44.03:0,44,409	0/0:21,0:20:38.26:0,38,385	1/1:13,1:14:8.76:137,9,0	1/1:20,2:23:28.11:285,28,0	1/1:15,0:15:9.95:184,10,0
chr10	99983584	.	CA	C	470.50	PASS	AB=0.844;AC=18;AF=0.321;AN=56;BaseQRankSum=-2.454;DP=389;FS=5.742;HRun=16;HaplotypeScore=73.2027;InbreedingCoeff=0.0098;MQ=75.95;MQ0=7;MQRankSum=-0.199;QD=2.46;ReadPosRankSum=1.443;VQSLOD=-0.5555;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:3.37:0,3,20	1/1:2,1:3:2.87:18,3,0	0/1:28,0:16:7.96:8,0,24	0/0:19,0:10:9.94:0,10,47	0/1:11,1:13:12.28:36,0,12	0/1:9,3:13:26.45:74,0,26	1/1:7,3:10:10.48:56,10,0	0/0:22,0:22:8.65:0,9,38	0/0:12,0:11:0.89:0,1,3	0/0:15,1:18:8.47:0,8,146	0/0:18,1:20:10.81:0,11,151	0/1:10,0:10:9.83:10,0,27	1/1:6,3:9:5.65:36,6,0	1/1:9,3:12:14.21:83,14,0	0/1:12,6:17:13.50:42,0,13	0/1:11,2:13:48.98:51,0,49	0/1:13,2:16:28.46:59,0,28	0/0:10,0:10:3.94:0,4,25	0/0:11,0:11:1.67:0,2,7	0/0:21,0:21:15.21:0,15,93	0/0:7,0:6:0.47:0,0,1	0/1:12,4:16:39.82:40,0,47	0/1:4,3:7:8.30:27,0,8	0/1:19,3:22:46.70:86,0,47	0/0:14,1:16:8.36:0,8,139	0/0:6,0:7:3.55:0,4,22	0/0:12,0:13:7.72:0,8,46	0/0:8,0:8:1.40:0,1,4
chr10	99983596	.	AAAAACAAAAACAAAAAC	A	2754.34	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-2.895;DP=382;FS=45.355;HRun=0;HaplotypeScore=158.9473;InbreedingCoeff=0.8540;MQ=62.91;MQ0=14;MQRankSum=1.579;QD=21.03;ReadPosRankSum=-1.400;VQSLOD=1.3481;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:33.10:504,33,0	0/0:3,0:3:9.03:0,9,384	1/1:23,0:9:2.49:20,2,0	0/0:16,0:7:8.36:0,8,180	0/0:15,0:15:14.26:0,14,1110	0/0:20,0:20:16.22:0,16,2542	0/0:11,0:11:11.38:0,11,662	1/1:14,0:13:30.96:458,31,0	1/1:9,0:8:14.96:123,15,0	0/0:20,0:20:52.16:0,52,2603	0/0:15,0:15:37.99:0,38,1621	0/0:10,0:10:25.66:0,26,946	0/0:12,0:12:30.01:0,30,1016	0/0:15,0:15:20.95:0,21,1498	0/0:16,0:15:27:0,27,1463	0/0:13,0:13:37.37:0,37,1577	0/0:17,0:17:44.12:0,44,2032	1/1:8,0:8:20.97:177,21,0	1/1:9,0:7:18.06:276,18,0	1/1:0,22:22:48.02:593,48,0	1/1:8,0:5:11.99:153,12,0	0/0:17,0:17:45.15:0,45,2265	0/0:9,0:9:24.07:0,24,1293	0/0:23,0:22:33.87:0,34,2135	0/0:19,0:19:54.02:0,54,2347	0/1:7,0:6:20.88:145,0,21	1/1:9,0:9:27.02:373,27,0	1/1:7,0:6:12.03:145,12,0
chr10	99983782	.	AGTGTGT	A	1511.22	PASS	AB=0.810;AC=14;AF=0.250;AN=56;BaseQRankSum=7.023;DP=646;FS=0.655;HRun=0;HaplotypeScore=143.4136;InbreedingCoeff=0.6739;MQ=71.47;MQ0=11;MQRankSum=-4.513;QD=7.91;ReadPosRankSum=-2.266;VQSLOD=2.3346;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,2:30:18.89:215,19,0	0/0:8,0:8:15.05:0,15,394	0/0:27,0:15:2.97:0,3,20	0/0:34,0:27:9.19:0,9,85	0/0:16,0:18:42.13:0,42,1113	0/0:22,0:24:32.37:0,32,840	0/0:27,0:26:35.49:0,35,682	1/1:28,0:27:5.93:39,6,0	0/0:7,0:25:12.02:0,12,259	0/0:21,0:20:42.02:0,42,967	0/0:10,0:10:12.01:0,12,179	0/0:7,0:20:21.05:0,21,434	0/0:22,0:23:39.92:0,40,831	0/0:31,0:32:62.44:0,62,1452	0/0:30,0:31:57.15:0,57,1466	0/0:17,0:17:33.11:0,33,956	0/0:28,0:28:38.85:0,39,825	0/0:9,0:20:11.97:0,12,176	0/1:16,1:16:14.31:56,0,14	1/1:7,7:15:13.30:261,13,0	0/1:25,23:46:14.99:17,0,15	0/0:11,0:14:18.53:0,19,408	0/0:16,0:16:20.04:0,20,676	0/0:34,0:34:63.15:0,63,1390	0/0:22,0:24:48.66:0,49,1283	1/1:8,17:25:2.45:586,2,0	1/1:6,12:18:18.06:372,18,0	1/1:5,2:8:6.67:138,7,0
chr10	99986048	.	C	CT	4535.56	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=6.419;DP=591;FS=0.764;HRun=9;HaplotypeScore=79.6398;InbreedingCoeff=0.9913;MQ=64.17;MQ0=8;MQRankSum=-7.486;QD=24.38;ReadPosRankSum=-1.542;VQSLOD=4.9121;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:50.92:0,51,430	0/0:9,0:9:14.97:0,15,130	0/0:25,0:14:27.20:0,27,190	0/0:30,0:13:21.85:0,22,145	0/0:24,0:24:68.95:0,69,590	0/0:22,1:23:26.81:0,27,461	0/0:23,0:23:53.92:0,54,461	1/1:9,18:28:63.05:667,63,0	1/1:4,14:18:42.11:464,42,0	0/0:29,0:29:80.93:0,81,692	0/0:15,0:15:41.98:0,42,361	0/0:12,0:12:26.97:0,27,231	0/0:16,0:16:38.95:0,39,332	0/0:15,0:15:38.99:0,39,338	0/0:24,0:24:50.97:0,51,442	0/0:17,0:17:47.99:0,48,416	0/0:34,0:34:83.94:0,84,722	1/1:9,10:18:13.06:371,13,0	1/1:13,20:32:75.13:794,75,0	1/1:6,20:27:59.91:620,60,0	1/1:2,7:9:21.06:230,21,0	0/0:17,0:17:47.99:0,48,416	0/0:23,0:23:62.96:0,63,542	0/0:20,0:20:53.99:0,54,469	0/0:20,0:20:47.95:0,48,413	1/1:2,18:19:54.14:591,54,0	1/1:9,15:22:54.12:579,54,0	1/1:1,7:8:21.02:219,21,0
chr10	99986064	.	C	CTT	4324.23	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=8.812;DP=580;FS=3.632;HRun=10;HaplotypeScore=83.0532;InbreedingCoeff=0.9292;MQ=56.88;MQ0=14;MQRankSum=-10.256;QD=18.48;ReadPosRankSum=-3.759;VQSLOD=3.2443;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,2:25:30.04:301,30,0	0/0:6,0:6:15.03:0,15,153	0/1:35,0:12:2.65:20,0,3	0/0:30,0:9:9.30:0,9,91	0/0:29,0:29:81.17:0,81,822	0/0:20,0:20:48.09:0,48,480	0/0:21,0:23:50.80:0,51,492	1/1:12,11:24:44.44:517,44,0	1/1:11,6:18:31.30:401,31,0	0/0:29,0:28:63.05:0,63,630	0/0:19,0:18:38.80:0,39,446	0/0:11,0:12:26.66:0,27,241	0/0:15,0:15:33.03:0,33,334	0/0:12,0:12:30.07:0,30,305	0/0:18,0:19:50.85:0,51,499	0/0:19,0:19:48.07:0,48,482	0/0:33,0:34:71.87:0,72,783	1/1:10,6:15:24.08:353,24,0	1/1:16,9:24:38.99:522,39,0	1/1:10,14:26:53.62:687,54,0	1/1:6,3:9:14.55:183,15,0	0/0:16,0:16:30.04:0,30,305	0/0:19,0:20:38.47:0,38,428	0/0:23,0:24:53.82:0,54,529	0/0:17,0:15:36.05:0,36,365	1/1:9,12:21:45.14:620,45,0	1/1:11,12:23:47.83:588,48,0	1/1:4,3:7:9.03:134,9,0
chr10	99986442	.	T	TG	10413.14	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=1.896;DP=729;FS=3.316;HRun=2;HaplotypeScore=77.5762;InbreedingCoeff=0.9992;MQ=56.33;MQ0=6;MQRankSum=4.313;QD=36.93;ReadPosRankSum=-1.039;VQSLOD=5.0242;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,46:47:99:1642,111,0	0/0:8,0:8:21.07:0,21,259	0/0:32,0:16:45.14:0,45,546	0/0:29,0:21:63.12:0,63,744	0/0:21,0:21:57.16:0,57,692	0/0:23,0:23:66.18:0,66,793	0/0:21,0:21:60.19:0,60,744	1/1:3,26:27:78.21:1048,78,0	1/1:0,25:25:75.25:1080,75,0	0/0:28,0:28:81.25:0,81,1003	0/0:17,0:17:45.14:0,45,558	0/0:25,0:25:75.24:0,75,929	0/0:26,0:26:72.20:0,72,866	0/0:25,0:25:72.23:0,72,888	0/0:31,0:31:93.29:0,93,1151	0/0:26,0:26:75.02:0,75,917	0/0:39,0:39:99:0,114,1393	1/1:0,30:30:84.28:1209,84,0	1/1:3,23:24:66.18:920,66,0	1/1:1,25:26:69.19:955,69,0	1/1:0,48:48:99:1771,123,0	0/0:16,0:16:45.14:0,45,558	0/0:21,0:21:60.18:0,60,731	0/0:41,0:41:99:0,117,1436	0/0:18,0:18:54.17:0,54,669	1/1:1,20:20:57.16:799,57,0	1/1:0,19:19:42.14:602,42,0	1/1:1,10:11:27.09:389,27,0
chr10	99987445	.	ATTTATTTATTTT	A	1183.79	PASS	AB=1.000;AC=15;AF=0.288;AN=52;BaseQRankSum=8.618;DP=213;FS=0.000;HRun=0;HaplotypeScore=82.1407;InbreedingCoeff=0.3276;MQ=65.89;MQ0=1;MQRankSum=-4.595;QD=11.27;ReadPosRankSum=0.560;VQSLOD=1.4794;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:10:19.17:24,0,19	0/0:3,0:3:9.03:0,9,572	0/0:9,0:7:4.45:0,4,128	0/0:9,0:1:2.99:0,3,24	0/0:3,0:3:9.03:0,9,430	0/0:13,0:13:39.11:0,39,1697	./.	0/1:28,0:28:99:149,0,477	1/1:0,4:4:6.02:234,6,0	0/0:9,0:9:26.99:0,27,897	0/0:3,0:3:9.03:0,9,516	0/0:5,0:5:15.03:0,15,393	0/0:4,0:4:12.04:0,12,758	0/0:2,0:2:6.02:0,6,381	0/0:5,0:5:15.04:0,15,541	0/0:2,0:2:6.02:0,6,361	0/0:23,0:23:66.22:0,66,3785	1/1:0,15:15:12.04:430,12,0	0/1:16,0:16:99:166,0,142	0/1:9,0:9:43.97:81,0,44	1/1:2,0:2:5.94:43,6,0	./.	0/0:5,0:5:15.04:0,15,717	0/0:1,0:1:3.01:0,3,190	0/0:12,0:12:36.10:0,36,1789	0/1:9,0:9:99:108,0,164	1/1:8,0:8:11.63:66,12,0	1/1:4,0:4:7.24:46,7,0
chr10	99987449	.	ATTTATTTT	A	4163.67	PASS	AB=0.656;AC=18;AF=0.333;AN=54;BaseQRankSum=9.754;DP=209;FS=1.942;HRun=0;HaplotypeScore=52.5165;InbreedingCoeff=0.5222;MQ=64.34;MQ0=1;MQRankSum=-2.644;QD=38.55;ReadPosRankSum=-2.006;VQSLOD=3.0157;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:1,10:11:16.43:169,0,16	0/0:4,0:4:12.03:0,12,443	0/1:6,0:4:6.87:9,0,7	0/0:10,0:2:6:0,6,62	0/0:4,0:4:12.02:0,12,307	0/0:14,0:14:42.09:0,42,1214	./.	1/1:0,25:25:75.02:1085,75,0	1/1:4,0:4:6.02:137,6,0	0/0:8,0:8:23.98:0,24,659	0/0:3,0:3:9.03:0,9,363	0/0:3,0:3:9.01:0,9,208	0/0:4,0:4:12.04:0,12,551	0/0:2,0:2:6.02:0,6,277	0/0:4,0:4:12.02:0,12,330	0/0:2,0:2:6.02:0,6,257	0/0:23,0:23:66.20:0,66,2696	1/1:15,0:15:12.03:234,12,0	1/1:0,16:16:48.05:935,48,0	1/1:0,8:8:17.79:250,18,0	1/1:2,0:2:5.94:43,6,0	0/0:1,0:1:3:0,3,28	0/0:5,0:5:15.04:0,15,510	0/0:1,0:1:3.01:0,3,139	0/0:13,0:13:39.10:0,39,1349	0/1:1,8:9:99:690,0,112	1/1:0,8:8:12.04:357,12,0	0/1:1,3:4:10.45:256,0,10
chr10	99988088	.	T	TAC	12330.72	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-11.608;DP=608;FS=0.650;HRun=0;HaplotypeScore=65.9840;InbreedingCoeff=0.9892;MQ=71.23;MQ0=2;MQRankSum=-1.347;QD=48.55;ReadPosRankSum=0.048;VQSLOD=5.8669;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:23:48.16:893,48,0	0/0:9,0:9:27.09:0,27,412	0/0:13,0:13:24.04:0,24,311	0/0:4,0:4:9.90:0,10,110	0/0:28,0:28:84.27:0,84,1256	0/0:21,0:21:60.19:0,60,896	0/0:25,0:25:75.22:0,75,1103	1/1:4,49:53:99:2822,153,0	1/1:2,17:18:42.14:811,42,0	0/0:30,0:30:87.30:0,87,1331	0/0:23,0:23:66.20:0,66,968	0/0:18,0:18:51.15:0,51,738	0/0:24,0:24:69.22:0,69,1031	0/0:26,0:26:75.24:0,75,1126	0/0:13,0:13:39.13:0,39,597	0/0:16,0:16:45.14:0,45,666	0/0:22,0:21:63.19:0,63,940	1/1:0,22:22:57.20:1084,57,0	1/1:1,10:12:27.06:510,27,0	1/1:0,28:28:78.27:1505,78,0	1/1:0,18:18:51.17:984,51,0	0/0:23,0:23:69.22:0,69,1035	0/0:23,0:23:69.22:0,69,1033	0/0:7,0:7:21.07:0,21,321	0/0:29,0:29:84.24:0,84,1222	1/1:0,34:34:99:1810,99,0	1/1:1,31:33:84.29:1621,84,0	1/1:0,10:11:15.05:289,15,0
chr10	99989299	.	G	GTGTGTGTGTGTGTA	6653.08	PASS	AB=0.846;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.189;DP=771;FS=9.289;HRun=0;HaplotypeScore=266.6434;InbreedingCoeff=0.5137;MQ=63.36;MQ0=6;MQRankSum=-9.251;QD=22.33;ReadPosRankSum=-4.383;VQSLOD=1.9486;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:36:52.90:119,0,53	0/0:13,0:13:38.82:0,39,1063	0/0:31,0:22:28.96:0,29,263	0/0:31,0:20:20.91:0,21,237	0/0:18,0:18:20.43:0,20,481	0/0:28,0:28:62.68:0,63,1729	0/0:30,0:30:78.14:0,78,1789	1/1:40,0:35:68.46:1555,68,0	0/1:30,0:30:72.85:73,0,187	0/0:28,0:27:54.05:0,54,1314	0/0:18,0:18:36.07:0,36,1018	0/0:19,0:18:45.08:0,45,1261	0/0:33,0:33:76.54:0,77,1993	0/0:22,0:22:47.85:0,48,1114	0/0:27,0:28:38.70:0,39,1084	0/0:34,0:34:65.06:0,65,1911	0/0:38,0:38:93.18:0,93,2390	0/1:31,0:30:66.76:67,0,116	1/1:24,0:23:44.90:1071,45,0	1/1:6,13:26:18.02:828,18,0	0/1:19,20:44:19.90:337,0,20	0/0:24,0:24:57.08:0,57,1414	0/0:20,0:20:36.43:0,36,740	0/0:37,0:37:75.34:0,75,2628	0/0:21,0:21:30.21:0,30,1206	0/1:10,17:31:87.56:1611,0,88	1/1:6,10:23:12:584,12,0	1/1:0,8:10:6.02:409,6,0
chr10	99989654	.	A	AC	4575.88	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-12.463;DP=653;FS=4.326;HRun=7;HaplotypeScore=66.6158;InbreedingCoeff=0.9884;MQ=82.30;MQ0=0;MQRankSum=-2.089;QD=29.71;ReadPosRankSum=-1.946;VQSLOD=4.7055;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,111,1066	0/0:8,0:8:21:0,21,195	0/0:29,0:29:55.04:0,55,606	0/0:23,0:21:31.51:0,32,380	0/0:27,0:27:69.11:0,69,666	0/0:29,0:29:81.13:0,81,782	0/0:20,0:20:51.08:0,51,492	1/1:6,19:25:31.18:637,31,0	0/0:26,0:26:63.09:0,63,608	0/0:18,0:18:51.08:0,51,492	0/0:20,0:20:48.07:0,48,463	0/0:15,0:15:42.06:0,42,406	0/0:26,0:26:72.10:0,72,689	0/0:19,0:19:51.06:0,51,485	0/0:23,0:23:60.09:0,60,579	0/0:24,0:24:66.09:0,66,631	0/0:29,0:29:81.13:0,81,782	0/0:26,0:26:63.04:0,63,599	1/1:1,18:19:54.17:652,54,0	1/1:3,21:24:63.15:744,63,0	1/1:5,16:21:48.15:580,48,0	0/0:28,0:28:81.09:0,81,773	0/0:23,0:23:57.08:0,57,550	0/0:20,0:20:48.07:0,48,463	0/0:19,0:19:57.09:0,57,550	1/1:4,28:32:81.24:968,81,0	1/1:4,23:27:75.21:886,75,0	1/1:0,6:6:9.03:109,9,0
chr10	99991010	.	C	CA	3737.90	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-11.698;DP=514;FS=3.566;HRun=9;HaplotypeScore=49.9576;InbreedingCoeff=0.9644;MQ=85.89;MQ0=0;MQRankSum=-1.068;QD=26.51;ReadPosRankSum=-2.295;VQSLOD=3.4048;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:86.98:0,87,755	0/0:7,0:7:21:0,21,182	0/0:17,0:18:18.62:0,19,156	0/0:17,0:16:20.93:0,21,173	0/0:20,0:20:50.99:0,51,442	0/0:16,0:16:41.97:0,42,360	0/0:14,0:14:35.94:0,36,304	1/1:4,22:26:66.10:704,66,0	0/0:11,0:11:26.98:0,27,234	0/0:24,0:24:62.98:0,63,544	0/0:23,0:23:53.98:0,54,469	0/0:9,0:9:11.99:0,12,104	0/0:21,0:21:50.98:0,51,443	0/0:15,0:15:44.97:0,45,387	0/0:15,0:15:35.99:0,36,312	0/0:22,0:22:53.97:0,54,465	0/0:27,0:31:77.12:0,77,623	0/0:17,0:17:44.99:0,45,390	1/1:2,11:14:35.91:369,36,0	1/1:5,21:26:60.16:664,60,0	1/1:3,10:13:7.07:306,7,0	0/0:13,1:14:8.82:0,9,305	0/0:20,0:20:50.97:0,51,442	0/0:13,0:13:35.98:0,36,313	0/0:14,0:14:35.99:0,36,312	1/1:3,26:29:78.16:833,78,0	1/1:0,19:19:51.14:564,51,0	1/1:3,11:14:27.07:299,27,0
chr10	99992212	.	TTTA	T	3143.66	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.965;DP=353;FS=5.366;HRun=0;HaplotypeScore=50.2334;InbreedingCoeff=0.8998;MQ=67.09;MQ0=1;MQRankSum=-0.154;QD=29.94;ReadPosRankSum=-0.534;VQSLOD=2.9216;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.16:0,54,1049	0/0:7,0:6:18.06:0,18,332	0/0:4,0:4:6.02:0,6,126	0/0:10,0:8:15.02:0,15,265	0/0:19,0:19:54.19:0,54,1135	0/0:16,0:16:42.14:0,42,884	0/0:12,0:12:27.08:0,27,521	1/1:5,20:24:60.13:796,60,0	0/0:8,0:8:21.05:0,21,364	0/0:16,0:16:45.13:0,45,843	0/0:10,0:10:30.09:0,30,591	0/0:12,0:12:36.10:0,36,634	0/0:4,0:4:12.04:0,12,227	0/0:7,0:7:18.06:0,18,333	0/0:10,0:10:27.08:0,27,523	0/0:9,0:9:24.07:0,24,440	0/0:30,0:30:81.22:0,81,1533	0/0:24,0:24:57.12:0,57,1032	1/1:4,12:16:36.12:546,36,0	1/1:2,6:8:18.02:223,18,0	1/1:3,6:9:9.03:137,9,0	0/0:3,0:3:3.01:0,3,62	0/0:4,0:4:6.02:0,6,74	0/0:5,0:5:15.05:0,15,289	0/0:18,0:18:54.19:0,54,1113	1/1:1,14:15:42.13:597,42,0	1/1:1,24:25:57.03:854,57,0	1/1:2,5:7:12.04:182,12,0
chr10	99996352	.	GTTT	G	7275.72	PASS	AB=0.538;AC=19;AF=0.339;AN=56;BaseQRankSum=14.108;DP=511;FS=12.003;HRun=8;HaplotypeScore=86.7702;InbreedingCoeff=0.9207;MQ=65.04;MQ0=2;MQRankSum=-4.908;QD=34.32;ReadPosRankSum=2.299;VQSLOD=2.7036;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:33:69.87:1057,70,0	0/0:5,0:5:15.04:0,15,288	0/0:16,0:14:33.11:0,33,650	0/0:14,0:12:33.11:0,33,603	0/0:21,0:21:60.20:0,60,1255	0/0:15,0:15:45.15:0,45,973	0/0:20,0:20:60.21:0,60,1268	1/1:6,24:30:69.21:985,69,0	1/1:1,18:19:48.16:707,48,0	0/0:19,0:19:48.16:0,48,1014	0/0:11,0:11:27.09:0,27,576	0/0:24,0:24:69.24:0,69,1506	0/0:22,0:22:57.20:0,57,1244	0/0:16,0:16:48.16:0,48,1046	0/0:23,0:23:69.24:0,69,1506	0/0:16,0:16:45.15:0,45,982	0/0:18,0:18:51.17:0,51,1064	1/1:0,15:15:45.15:663,45,0	1/1:4,16:20:45.14:646,45,0	1/1:0,9:9:24.08:354,24,0	1/1:1,22:23:57.19:840,57,0	0/0:5,0:5:15.05:0,15,311	0/0:16,0:17:45.15:0,45,960	0/0:16,0:16:45.15:0,45,975	0/0:21,0:20:63.22:0,63,1372	0/1:3,18:21:11.31:697,0,11	1/1:1,22:23:51.17:752,51,0	1/1:2,16:18:39.11:575,39,0
chr10	99998131	.	GT	G	414.60	PASS	AB=0.933;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.159;DP=497;FS=8.133;HRun=12;HaplotypeScore=93.7104;InbreedingCoeff=0.8097;MQ=70.06;MQ0=0;MQRankSum=1.296;QD=8.29;ReadPosRankSum=1.485;VQSLOD=2.4447;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:17:14.19:253,14,0	0/0:7,0:7:18.04:0,18,183	0/0:16,1:11:18:0,18,166	0/0:20,1:14:7.05:0,7,82	0/0:25,2:28:19.49:0,19,536	0/0:20,0:20:57.07:0,57,557	0/0:16,0:17:44.90:0,45,428	0/0:35,0:35:76.70:0,77,382	1/1:3,5:8:14.90:116,15,0	0/0:27,1:29:39.71:0,40,561	0/0:23,0:23:42.98:0,43,570	0/0:15,0:15:35.96:0,36,345	0/0:12,0:12:26.96:0,27,242	0/0:15,0:15:33.01:0,33,313	0/0:16,0:16:30.06:0,30,304	0/0:17,0:18:38.88:0,39,363	0/0:16,1:18:27.69:0,28,424	1/1:3,8:11:23.87:181,24,0	0/0:15,0:15:25.47:0,25,126	0/0:18,0:19:51.94:0,52,246	0/0:7,0:8:7.95:0,8,33	0/1:13,1:14:4.04:4,0,123	0/0:12,0:13:32.89:0,33,314	0/0:11,1:13:21.74:0,22,280	0/0:28,2:31:57.63:0,58,714	0/0:16,0:16:42.51:0,43,216	0/0:29,0:29:61.49:0,61,295	0/0:12,0:12:17.04:0,17,82
chr10	99998132	.	T	TTTTA	7965.23	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=2.084;DP=531;FS=18.784;HRun=0;HaplotypeScore=124.1609;InbreedingCoeff=0.9298;MQ=67.56;MQ0=0;MQRankSum=-12.864;QD=50.41;ReadPosRankSum=-1.350;VQSLOD=4.2824;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.11:0,45,549	0/0:7,0:7:21.03:0,21,361	0/0:17,0:11:4.09:0,4,166	0/0:20,0:13:10.42:0,10,135	0/0:30,0:30:69.19:0,69,1131	0/0:20,0:20:60.16:0,60,1005	0/0:17,0:17:45.10:0,45,752	1/1:27,19:46:99:2250,120,0	0/0:11,0:11:21.03:0,21,245	0/0:31,0:31:78.16:0,78,1240	0/0:23,0:23:64.36:0,64,1051	0/0:16,0:16:36:0,36,602	0/0:12,0:12:33:0,33,432	0/0:15,0:15:39.08:0,39,612	0/0:16,0:16:42.11:0,42,669	0/0:18,0:18:45.06:0,45,661	0/0:18,0:18:19.08:0,19,730	0/0:13,0:13:27.07:0,27,345	1/1:14,4:19:48.02:817,48,0	1/1:11,14:26:72.15:1494,72,0	1/1:6,2:8:2.92:55,3,0	0/0:14,0:14:32.40:0,32,446	0/0:13,0:13:33.08:0,33,557	0/0:13,0:13:39.11:0,39,655	0/0:32,0:32:84.18:0,84,1355	1/1:6,12:18:24.31:1058,24,0	1/1:11,20:31:86.98:1750,87,0	1/1:4,6:10:27.04:542,27,0
chr10	99998154	.	ATTT	A	4001.16	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=10.892;DP=523;FS=3.586;HRun=12;HaplotypeScore=107.6005;InbreedingCoeff=0.9040;MQ=72.30;MQ0=0;MQRankSum=-10.422;QD=24.70;ReadPosRankSum=0.350;VQSLOD=2.7984;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.17:0,51,967	0/0:7,0:7:21.07:0,21,414	0/0:33,0:19:19.64:0,20,470	0/1:24,0:16:14.03:14,0,164	0/0:30,0:31:84.27:0,84,1586	0/0:19,1:20:19.28:0,19,1012	0/0:15,0:16:33.09:0,33,614	1/1:7,27:34:78.15:972,78,0	0/0:4,0:12:24.07:0,24,328	0/0:26,0:26:54.18:0,54,1031	0/0:21,0:21:60.21:0,60,1154	0/0:16,0:16:30.10:0,30,572	0/0:11,0:11:30.10:0,30,592	0/0:15,0:16:48.14:0,48,882	0/0:14,0:14:36.10:0,36,674	0/0:17,0:17:48.16:0,48,912	0/0:22,0:22:63.22:0,63,1223	0/0:5,0:16:29.97:0,30,455	1/1:2,10:12:30.08:366,30,0	1/1:8,21:29:66.15:828,66,0	1/1:0,5:6:14.90:149,15,0	0/0:8,0:10:18.06:0,18,296	0/0:16,0:16:45.15:0,45,888	0/0:10,0:10:24.08:0,24,467	0/0:24,0:26:69.21:0,69,1275	1/1:5,16:21:40.26:595,40,0	1/1:3,24:27:60.10:737,60,0	1/1:1,8:9:27.09:340,27,0
chr10	99998976	.	TC	T	259.83	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.557;DP=581;FS=24.828;HRun=6;HaplotypeScore=72.0669;InbreedingCoeff=0.9966;MQ=86.48;MQ0=0;MQRankSum=-3.571;QD=19.99;ReadPosRankSum=4.090;VQSLOD=2.1411;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.23:0,87,1096	0/0:9,0:9:27.09:0,27,355	0/0:23,0:23:63.99:0,64,738	0/0:21,0:21:53.29:0,53,583	0/0:25,0:25:72.20:0,72,915	0/0:12,0:12:33.05:0,33,413	0/0:26,0:26:78.21:0,78,979	0/0:30,0:30:75.22:0,75,949	0/0:25,0:25:75.24:0,75,986	0/0:29,0:29:75.23:0,75,964	0/0:15,0:15:45.13:0,45,577	0/0:20,0:20:57.19:0,57,748	0/0:24,0:24:72.22:0,72,931	0/0:27,0:27:81.25:0,81,1048	0/0:25,0:25:72.21:0,72,917	0/0:25,0:25:69.20:0,69,878	0/0:32,0:32:89.85:0,90,1124	0/0:15,0:15:45.10:0,45,571	0/0:13,0:13:36.07:0,36,441	0/0:17,0:17:36.12:0,36,471	0/0:29,0:29:81.26:0,81,1064	0/0:19,0:19:51.15:0,51,670	0/0:10,0:10:30.10:0,30,395	0/0:22,0:22:57.16:0,57,719	0/0:21,0:21:54.16:0,54,696	0/0:9,0:9:27.09:0,27,355	0/0:15,0:15:42.14:0,42,552	1/1:0,13:13:33.08:354,33,0
chr10	99999396	.	TGACTGCTCTTCCA	T	2109.15	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=7.456;DP=470;FS=14.700;HRun=0;HaplotypeScore=143.2193;InbreedingCoeff=0.8340;MQ=50.03;MQ0=21;MQRankSum=-6.592;QD=50.22;ReadPosRankSum=0.672;VQSLOD=2.7666;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:24:54.16:0,54,2702	0/0:10,0:10:27.09:0,27,1640	0/0:8,0:3:3.01:0,3,36	0/0:5,0:2:3.01:0,3,48	0/0:27,0:27:72.25:0,72,4483	0/0:22,0:20:45.15:0,45,2724	0/0:34,0:29:87.30:0,87,4419	1/1:4,8:7:3.01:119,3,0	0/0:23,0:23:56.27:0,56,3290	0/0:23,0:22:66.23:0,66,4069	0/0:18,0:18:48.16:0,48,2767	0/0:17,0:17:29.70:0,30,1934	0/0:18,0:18:48.16:0,48,2871	0/0:15,0:15:39.13:0,39,2406	0/0:22,0:22:48.16:0,48,2712	0/0:9,0:9:24.08:0,24,1493	0/0:41,0:38:90.31:0,90,5630	0/0:25,0:20:51.17:0,51,2901	1/1:1,1:2:6.02:236,6,0	1/1:1,6:7:18.06:714,18,0	./.	0/0:20,0:20:48.16:0,48,2828	0/0:21,0:20:54.19:0,54,3464	0/0:19,0:18:42.12:0,42,2580	0/0:17,0:16:48.16:0,48,2720	1/1:4,7:10:21.07:835,21,0	1/1:4,6:10:9.03:358,9,0	./.
chr10	99999513	.	TTA	T	219.50	PASS	AC=6;AF=0.125;AN=48;BaseQRankSum=5.663;DP=462;FS=2.584;HRun=0;HaplotypeScore=73.6731;InbreedingCoeff=0.9062;MQ=60.85;MQ0=2;MQRankSum=-5.364;QD=18.29;ReadPosRankSum=2.684;VQSLOD=3.6425;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.25:0,72,1442	0/0:7,0:7:21.07:0,21,427	0/0:29,0:18:54.14:0,54,980	0/0:21,0:18:54.17:0,54,1014	0/0:19,0:19:57.20:0,57,1127	0/0:19,0:19:51.17:0,51,1002	0/0:14,0:13:39.13:0,39,755	./.	0/0:33,0:33:96.33:0,96,1924	0/0:28,0:28:84.27:0,84,1640	0/0:21,0:21:63.22:0,63,1265	0/0:12,0:12:36.12:0,36,707	0/0:28,0:28:84.29:0,84,1682	0/0:14,0:14:42.14:0,42,853	0/0:23,0:23:66.23:0,66,1341	0/0:25,0:25:72.24:0,72,1384	0/0:32,0:31:81.23:0,81,1566	0/0:22,0:22:63.22:0,63,1279	1/1:1,3:3:9.03:103,9,0	1/1:0,6:7:21.01:206,21,0	./.	0/0:16,0:16:48.16:0,48,960	0/0:20,0:20:60.21:0,60,1181	0/0:19,0:19:57.20:0,57,1156	0/0:20,0:20:60.19:0,60,1169	1/1:0,1:1:3.01:33,3,0	./.	./.
chr10	99999518	.	TAC	T	39.02	PASS	AC=6;AF=0.125;AN=48;BaseQRankSum=5.662;DP=459;FS=1.185;HRun=0;HaplotypeScore=75.4792;InbreedingCoeff=0.9036;MQ=61.12;MQ0=2;MQRankSum=-5.365;QD=3.25;ReadPosRankSum=3.054;VQSLOD=1.7424;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.25:0,72,1389	0/0:7,0:7:21.07:0,21,406	0/0:26,0:17:51.17:0,51,963	0/0:21,0:18:51.17:0,51,904	0/0:19,0:19:57.18:0,57,1066	0/0:18,0:18:45.15:0,45,869	0/0:15,0:14:33.11:0,33,619	./.	0/0:33,0:33:99:0,99,1869	0/0:31,0:31:93.31:0,93,1731	0/0:21,0:21:60.19:0,60,1108	0/0:13,0:13:39.12:0,39,719	0/0:27,0:27:81.28:0,81,1564	0/0:15,0:15:39.13:0,39,748	0/0:24,0:24:69.22:0,69,1300	0/0:23,0:23:66.23:0,66,1274	0/0:31,0:30:78.21:0,78,1444	0/0:22,0:22:63.22:0,63,1185	1/1:1,3:3:8.73:49,9,0	1/1:1,6:7:19.75:95,20,0	./.	0/0:15,0:15:45.15:0,45,861	0/0:20,0:20:60.21:0,60,1132	0/0:19,0:19:57.20:0,57,1086	0/0:20,0:20:60.21:0,60,1144	1/1:0,1:1:2.90:16,3,0	./.	./.
chr10	99999522	.	TGG	T	83.76	PASS	AC=6;AF=0.125;AN=48;BaseQRankSum=5.663;DP=459;FS=1.173;HRun=2;HaplotypeScore=75.1823;InbreedingCoeff=0.9063;MQ=61.48;MQ0=2;MQRankSum=-5.437;QD=6.98;ReadPosRankSum=3.120;VQSLOD=0.4787;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.21:0,75,1482	0/0:9,0:9:27.09:0,27,536	0/0:26,0:18:54.19:0,54,1067	0/0:19,0:16:45.15:0,45,874	0/0:21,0:21:63.22:0,63,1279	0/0:20,0:20:54.19:0,54,1085	0/0:14,0:13:33.09:0,33,663	./.	0/0:36,0:36:99:0,108,2161	0/0:29,0:29:87.30:0,87,1767	0/0:18,0:18:54.19:0,54,1085	0/0:13,0:13:39.13:0,39,792	0/0:28,0:28:84.27:0,84,1669	0/0:14,0:14:39.13:0,39,792	0/0:25,0:25:69.24:0,69,1390	0/0:24,0:24:69.22:0,69,1365	0/0:28,0:28:75.26:0,75,1514	0/0:20,0:20:57.20:0,57,1133	1/1:1,3:3:8.91:61,9,0	1/1:1,6:7:20.54:124,21,0	./.	0/0:14,0:14:42.13:0,42,808	0/0:20,0:20:60.19:0,60,1181	0/0:19,0:19:57.20:0,57,1146	0/0:23,0:23:69.24:0,69,1365	1/1:0,1:1:2.97:20,3,0	./.	./.
chr10	99999531	.	TA	T	694.47	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.500;DP=448;FS=1.600;HRun=4;HaplotypeScore=59.7954;InbreedingCoeff=0.8704;MQ=61.38;MQ0=2;MQRankSum=-8.412;QD=24.80;ReadPosRankSum=-0.988;VQSLOD=2.2922;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.25:0,75,1048	0/0:8,0:8:24.08:0,24,335	0/0:20,0:14:30.07:0,30,393	0/0:14,0:12:27.02:0,27,338	0/0:21,0:21:54.17:0,54,734	0/0:19,0:19:51.17:0,51,714	0/0:16,0:14:39.13:0,39,537	1/1:0,3:3:9.03:108,9,0	0/0:33,0:33:96.32:0,96,1331	0/0:31,0:31:75.22:0,75,1028	0/0:17,0:17:45.14:0,45,606	0/0:15,0:15:39.12:0,39,530	0/0:25,0:25:75.24:0,75,1029	0/0:11,0:11:30.08:0,30,402	0/0:22,0:22:54.17:0,54,738	0/0:21,0:21:60.20:0,60,840	0/0:32,0:32:59.51:0,60,1060	0/0:20,1:21:48.34:0,48,731	1/1:1,4:4:12.04:143,12,0	1/1:0,12:12:36.11:429,36,0	1/1:0,1:1:3.01:33,3,0	0/0:8,0:8:21.07:0,21,294	0/0:22,0:22:66.22:0,66,921	0/0:14,0:14:36.12:0,36,504	0/0:24,0:24:69.20:0,69,918	1/1:0,3:3:6.02:72,6,0	1/1:0,3:3:6.02:72,6,0	1/1:1,0:1:1.82:5,2,0
chr10	99999554	.	A	AC	760.98	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.820;DP=465;FS=8.082;HRun=1;HaplotypeScore=67.0596;InbreedingCoeff=0.9395;MQ=67.44;MQ0=0;MQRankSum=-9.906;QD=13.35;ReadPosRankSum=-2.546;VQSLOD=1.1913;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.30:0,93,1204	0/0:9,0:9:27.09:0,27,351	0/0:8,0:8:24.04:0,24,294	0/0:11,0:11:30.10:0,30,388	0/0:23,0:23:66.21:0,66,855	0/0:20,0:20:57.19:0,57,740	0/0:15,0:14:39.11:0,39,491	1/1:5,5:9:18.01:189,18,0	0/0:32,0:32:93.29:0,93,1193	0/0:28,0:28:84.27:0,84,1079	0/0:14,0:14:42.14:0,42,545	0/0:16,0:16:45.09:0,45,563	0/0:22,0:22:66.19:0,66,829	0/0:13,0:13:39.11:0,39,491	0/0:19,0:19:45.15:0,45,584	0/0:21,0:21:57.19:0,57,740	0/0:32,0:32:84.23:0,84,1058	0/0:21,0:21:63.20:0,63,813	1/1:2,9:11:23.97:208,24,0	1/1:6,11:17:33.44:252,33,0	1/1:2,2:4:8.82:102,9,0	0/0:8,0:8:24.08:0,24,312	0/0:21,0:21:60.18:0,60,765	0/0:18,0:18:51.15:0,51,647	0/0:24,0:24:72.23:0,72,935	1/1:0,6:6:7.40:87,7,0	1/1:3,4:7:8.95:66,9,0	1/1:0,2:2:5.95:41,6,0
chr10	99999674	.	G	GTTGTCTTT	5654.62	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-0.462;DP=519;FS=17.594;HRun=0;HaplotypeScore=127.6008;InbreedingCoeff=0.9460;MQ=77.99;MQ0=0;MQRankSum=-9.948;QD=75.39;ReadPosRankSum=-4.980;VQSLOD=2.8083;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,2582	0/0:8,0:8:18.06:0,18,485	0/0:16,0:16:36.12:0,36,864	0/0:30,0:29:39.03:0,39,915	0/0:28,0:28:78.20:0,78,1930	0/0:15,0:15:33.09:0,33,825	0/0:23,0:23:54.15:0,54,1335	1/1:10,3:14:32.99:1021,33,0	0/0:25,0:25:69.21:0,69,1773	0/0:17,0:17:48.16:0,48,1207	0/0:20,0:20:60.21:0,60,1579	0/0:12,0:12:36.11:0,36,873	0/0:20,0:20:57.17:0,57,1407	0/0:14,0:14:36.12:0,36,960	0/0:15,0:15:42.14:0,42,1108	0/0:17,0:17:48.12:0,48,1179	0/0:27,0:27:72.20:0,72,1863	0/0:19,0:19:42.14:0,42,1081	1/1:7,2:11:6.90:724,7,0	1/1:10,9:19:33.07:1205,33,0	1/1:5,3:9:18.05:697,18,0	0/0:24,0:24:51.17:0,51,1334	0/0:25,0:25:69.19:0,69,1743	0/0:35,0:35:96.31:0,96,2515	0/0:18,0:18:51.16:0,51,1292	1/1:5,7:12:30.09:1152,30,0	1/1:5,3:9:18.06:726,18,0	1/1:0,1:1:3.01:129,3,0
chr10	99999752	.	CT	C	901.38	PASS	AB=1.000;AC=5;AF=0.093;AN=54;BaseQRankSum=4.847;DP=560;FS=1.804;HRun=10;HaplotypeScore=73.3646;InbreedingCoeff=0.6593;MQ=71.07;MQ0=7;MQRankSum=-0.597;QD=15.28;ReadPosRankSum=0.814;VQSLOD=4.0792;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:34:66.99:0,67,931	0/1:6,0:6:13.62:14,0,87	0/0:36,0:21:17.36:0,17,194	0/0:29,0:17:21.46:0,21,186	0/0:26,0:26:66.15:0,66,707	0/0:13,0:13:33.09:0,33,365	0/0:20,0:20:45.99:0,46,491	0/0:14,0:11:8.23:0,8,69	1/1:5,29:34:80.98:703,81,0	0/0:20,1:21:13.01:0,13,343	0/0:20,0:20:22.17:0,22,373	0/0:22,2:24:34:0,34,569	0/0:25,0:25:66.07:0,66,691	0/0:18,0:19:44.95:0,45,477	0/0:17,0:17:39.08:0,39,415	0/0:22,1:24:39.96:0,40,652	0/0:35,0:35:99:0,99,1074	1/1:3,16:18:35.99:312,36,0	0/0:12,0:15:9.91:0,10,98	0/0:15,0:13:20.26:0,20,122	./.	0/0:9,0:9:18.03:0,18,185	0/0:22,1:23:27.59:0,28,496	0/0:20,0:20:54.13:0,54,589	0/0:18,0:22:49.89:0,50,493	0/0:14,0:15:18.47:0,18,132	0/0:10,0:10:7.86:0,8,70	0/0:6,0:6:3.45:0,3,23
chr10	99999930	.	GA	G	958.50	PASS	AB=0.966;AC=7;AF=0.125;AN=56;BaseQRankSum=9.384;DP=654;FS=3.900;HRun=10;HaplotypeScore=76.6760;InbreedingCoeff=0.7958;MQ=74.47;MQ0=1;MQRankSum=0.578;QD=8.12;ReadPosRankSum=2.793;VQSLOD=2.3611;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,33:41:98.96:859,99,0	0/0:9,0:9:23.90:0,24,245	0/1:27,1:24:38.16:38,0,170	0/0:17,0:17:27.45:0,27,236	0/0:32,0:32:87.24:0,87,962	0/0:16,0:16:39.06:0,39,406	0/0:23,1:24:33.58:0,34,572	0/0:18,1:19:21.16:0,21,426	1/1:5,0:25:34.62:102,35,0	0/0:18,0:18:45.02:0,45,481	0/0:16,0:16:16.26:0,16,339	0/0:22,0:22:28.77:0,29,537	0/0:19,0:22:65.65:0,66,656	0/0:15,0:17:44.95:0,45,479	0/0:22,0:22:62.51:0,63,661	0/0:19,1:20:24.90:0,25,477	0/0:47,1:48:99:0,112,1454	1/1:2,0:23:36.67:108,37,0	0/0:23,0:25:65.83:0,66,678	0/0:23,1:24:30.98:0,31,532	0/0:26,0:26:69.10:0,69,747	0/0:25,0:25:66.18:0,66,726	0/0:25,1:27:39.95:0,40,636	0/0:18,0:18:48.13:0,48,530	0/0:18,0:19:18.90:0,19,402	0/0:25,2:28:13.88:0,14,573	0/0:34,0:36:75.35:0,75,879	0/0:6,0:6:6.02:0,6,66
chr10	100000403	.	AC	A	3660.24	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-1.675;DP=527;FS=5.531;HRun=4;HaplotypeScore=155.5009;InbreedingCoeff=0.8532;MQ=69.29;MQ0=1;MQRankSum=-8.594;QD=24.90;ReadPosRankSum=-3.203;VQSLOD=1.3328;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:57.03:0,57,285	0/0:3,0:3:9.03:0,9,119	0/0:17,0:15:31.60:0,32,378	0/0:16,0:12:30.78:0,31,317	0/0:20,0:20:47.95:0,48,556	0/0:23,0:22:66.15:0,66,813	0/0:22,0:22:66.19:0,66,845	1/1:11,23:34:93.11:1003,93,0	0/0:18,0:18:0.18:0,0,109	0/0:18,0:18:51.06:0,51,633	0/0:12,0:12:33.11:0,33,438	0/0:21,0:21:57.14:0,57,731	0/0:22,0:23:63.16:0,63,813	0/0:21,0:21:60.19:0,60,777	0/0:22,0:22:57.02:0,57,697	0/0:17,0:17:45.11:0,45,566	0/0:40,0:40:99:0,120,1545	0/1:11,0:11:14.71:15,0,54	1/1:6,20:25:63.13:713,63,0	1/1:2,15:16:45.11:518,45,0	1/1:1,11:12:27.04:304,27,0	0/0:12,0:12:35.71:0,36,381	0/0:7,0:7:12.04:0,12,159	0/0:21,0:21:63.19:0,63,821	0/0:12,0:12:33.04:0,33,415	1/1:3,14:17:34.78:489,35,0	1/1:9,10:18:35.15:431,35,0	1/1:8,3:11:16.96:187,17,0
chr10	100003285	.	AT	A	1202.39	PASS	AB=0.873;AC=26;AF=0.464;AN=56;BaseQRankSum=2.138;DP=290;FS=18.836;HRun=12;HaplotypeScore=60.2547;InbreedingCoeff=0.5171;MQ=55.63;MQ0=0;MQRankSum=-4.571;QD=9.78;ReadPosRankSum=2.955;VQSLOD=1.0479;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:14.44:115,14,0	0/1:3,2:6:28.56:29,0,88	0/1:5,0:3:1.59:2,0,19	0/1:5,1:5:2.23:2,0,48	0/0:15,1:17:27.26:0,27,271	0/1:15,2:17:10.49:10,0,226	0/0:15,0:15:36.03:0,36,354	1/1:0,7:7:17.92:139,18,0	1/1:0,7:7:20.92:162,21,0	0/0:11,1:12:0.83:0,1,184	0/0:8,0:8:11.98:0,12,112	0/0:22,1:23:48.02:0,48,465	0/0:9,1:10:0.74:0,1,163	0/0:16,2:18:38.92:0,39,352	0/0:16,2:18:7.27:0,7,241	0/0:7,0:7:11.99:0,12,112	0/1:8,1:9:5.23:5,0,123	1/1:1,4:5:8.95:70,9,0	1/1:0,6:6:17.93:139,18,0	1/1:0,7:7:14.93:116,15,0	1/1:0,5:5:8.23:68,8,0	0/0:14,1:15:25.25:0,25,236	0/0:9,0:9:18:0,18,172	0/0:14,1:15:12.50:0,12,123	0/1:8,2:10:28.43:28,0,93	1/1:0,8:8:23.91:185,24,0	1/1:0,12:12:35.86:278,36,0	1/1:0,2:2:5.98:46,6,0
chr10	100003876	.	AAAAT	A	6946.17	PASS	AB=0.837;AC=21;AF=0.375;AN=56;BaseQRankSum=13.259;DP=481;FS=5.205;HRun=0;HaplotypeScore=79.0533;InbreedingCoeff=0.7901;MQ=63.20;MQ0=1;MQRankSum=0.907;QD=28.24;ReadPosRankSum=-1.055;VQSLOD=4.0087;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,35:41:93.32:1529,93,0	0/0:6,0:6:15.05:0,15,367	0/1:11,0:9:2.34:2,0,65	0/0:8,0:7:9.97:0,10,191	0/0:25,0:25:51.18:0,51,1240	0/0:17,0:17:30.09:0,30,682	0/0:13,0:13:24.07:0,24,540	1/1:13,14:27:42.14:679,42,0	1/1:5,13:18:30.10:493,30,0	0/0:19,0:19:33.11:0,33,807	0/0:15,0:15:30.10:0,30,725	0/0:15,0:15:30.10:0,30,731	0/0:11,0:11:24.07:0,24,540	0/0:14,0:14:27.09:0,27,652	0/0:16,0:16:39.13:0,39,926	0/1:13,1:14:16.21:16,0,693	0/0:23,0:23:54.19:0,54,1310	0/1:6,16:22:0.80:692,0,1	1/1:12,5:17:15.05:247,15,0	1/1:5,19:24:51.17:834,51,0	1/1:5,9:14:24.08:395,24,0	0/0:9,0:9:6.02:0,6,147	0/0:9,0:9:12.04:0,12,293	0/0:8,0:8:6.02:0,6,146	0/0:27,0:27:63.22:0,63,1525	1/1:4,18:22:54.18:879,54,0	1/1:5,18:23:45.15:737,45,0	1/1:2,11:13:27.09:444,27,0
chr10	100005805	.	C	CCCT	9945.71	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=6.061;DP=639;FS=0.337;HRun=0;HaplotypeScore=96.7752;InbreedingCoeff=0.9893;MQ=74.40;MQ0=0;MQRankSum=-7.343;QD=51.00;ReadPosRankSum=1.117;VQSLOD=6.8488;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1754	0/0:9,0:9:27.09:0,27,460	0/0:22,0:20:50.64:0,51,758	0/0:12,0:12:17.86:0,18,254	0/0:36,0:36:99:0,108,1808	0/0:30,0:30:87.25:0,87,1380	0/0:23,0:23:66.20:0,66,1075	1/1:7,21:30:77.93:1416,78,0	1/1:1,23:24:66.23:1453,66,0	0/0:21,0:21:57.18:0,57,912	0/0:14,0:14:39.13:0,39,662	0/0:19,0:19:57.17:0,57,899	0/0:26,0:26:75.24:0,75,1243	0/0:18,0:18:48.15:0,48,792	0/0:31,0:31:84.25:0,84,1335	0/0:20,0:20:60.19:0,60,998	0/0:26,0:25:72.22:0,72,1199	1/1:1,28:29:66.22:1455,66,0	1/1:3,14:17:43.05:936,43,0	1/1:2,19:22:42.09:850,42,0	1/1:1,15:17:30.10:662,30,0	0/0:27,0:27:81.24:0,81,1280	0/0:30,0:30:84.20:0,84,1295	0/0:19,0:19:45.10:0,45,712	0/0:25,0:25:72.22:0,72,1152	1/1:4,27:33:96.28:1960,96,0	1/1:4,15:19:48.16:1016,48,0	1/1:0,4:4:9.03:199,9,0
chr10	100008026	.	GTTA	G	6578.83	PASS	AB=0.545;AC=17;AF=0.304;AN=56;BaseQRankSum=15.106;DP=552;FS=0.365;HRun=0;HaplotypeScore=79.4706;InbreedingCoeff=0.9105;MQ=67.87;MQ0=0;MQRankSum=-3.196;QD=35.18;ReadPosRankSum=-2.254;VQSLOD=4.2955;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.26:0,75,1607	0/0:10,0:10:30.10:0,30,644	0/0:6,0:6:14.98:0,15,190	0/0:7,0:6:17.95:0,18,338	0/0:36,0:36:99:0,105,1954	0/0:21,0:21:63.22:0,63,1337	0/0:10,0:10:30.10:0,30,632	1/1:5,33:38:96.20:1397,96,0	0/1:2,10:12:37.33:328,0,37	0/0:29,0:28:84.17:0,84,1566	0/0:22,0:22:60.19:0,60,1211	0/0:21,0:21:57.17:0,57,1144	0/0:24,0:24:69.20:0,69,1397	0/0:16,0:16:42.11:0,42,858	0/0:27,0:27:81.28:0,81,1723	0/0:19,0:19:54.19:0,54,1146	0/0:16,0:16:42.11:0,42,818	1/1:0,16:16:36.08:550,36,0	1/1:2,7:9:21.03:289,21,0	1/1:2,26:28:78.14:1166,78,0	1/1:3,16:19:36.08:550,36,0	0/0:13,0:13:36.10:0,36,693	0/0:27,0:27:72.25:0,72,1544	0/0:13,0:13:39.12:0,39,796	0/0:21,0:21:57.20:0,57,1221	1/1:2,22:24:66.18:988,66,0	1/1:1,23:24:63.21:1009,63,0	1/1:4,13:17:23.97:302,24,0
chr10	100008678	.	A	ACT	12026.64	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-4.283;DP=678;FS=6.794;HRun=0;HaplotypeScore=91.9975;InbreedingCoeff=0.9994;MQ=84.10;MQ0=0;MQRankSum=-10.348;QD=52.75;ReadPosRankSum=-0.975;VQSLOD=4.7763;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:93.32:1797,93,0	0/0:10,0:10:30.09:0,30,438	0/0:25,0:26:78.08:0,78,1113	0/0:20,0:20:53.88:0,54,762	0/0:35,0:35:99:0,99,1516	0/0:32,0:32:96.33:0,96,1470	0/0:15,0:15:42.14:0,42,642	1/1:8,32:40:99:2196,117,0	1/1:1,28:29:87.30:1678,87,0	0/0:27,0:27:81.27:0,81,1221	0/0:23,0:23:69.21:0,69,1006	0/0:28,0:28:84.29:0,84,1286	0/0:17,0:17:51.17:0,51,781	0/0:29,0:29:87.30:0,87,1331	0/0:34,0:34:96.30:0,96,1427	0/0:28,0:28:81.26:0,81,1215	0/0:28,0:28:81.28:0,81,1238	1/1:1,11:12:36.12:679,36,0	1/1:0,19:19:57.20:1100,57,0	1/1:6,13:19:54.19:1021,54,0	1/1:2,13:14:30.08:578,30,0	0/0:34,0:34:96.33:0,96,1466	0/0:21,0:21:60.19:0,60,890	0/0:22,0:22:66.22:0,66,1009	0/0:21,0:21:63.18:0,63,921	1/1:8,19:27:29.29:1283,29,0	1/1:5,19:24:66.23:1232,66,0	1/1:0,8:8:24.08:464,24,0
chr10	100008716	.	GA	G	7237.03	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.252;DP=727;FS=7.651;HRun=2;HaplotypeScore=91.1150;InbreedingCoeff=0.9834;MQ=86.48;MQ0=0;MQRankSum=-9.488;QD=35.13;ReadPosRankSum=-2.443;VQSLOD=3.7482;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.29:0,93,1371	0/0:13,0:13:39.13:0,39,584	0/0:27,0:27:81.15:0,81,1118	0/0:24,0:24:68.18:0,68,984	0/0:40,0:40:99:0,114,1683	0/0:32,0:32:96.33:0,96,1439	0/0:17,0:17:51.17:0,51,764	1/1:4,40:44:99:1570,123,0	1/1:0,30:30:87.28:1128,87,0	0/0:33,0:33:96.33:0,96,1438	0/0:20,0:20:57.18:0,57,830	0/0:32,0:32:96.33:0,96,1439	0/0:27,0:27:78.25:0,78,1147	0/0:32,0:32:87.29:0,87,1286	0/0:34,0:34:99:0,99,1442	0/0:26,0:26:78.26:0,78,1169	0/0:22,0:22:66.22:0,66,989	1/1:1,14:15:42.14:545,42,0	1/1:2,15:17:45.15:584,45,0	1/1:2,21:23:51.17:662,51,0	1/1:0,15:15:39.13:506,39,0	0/0:33,0:33:96.33:0,96,1438	0/0:31,0:31:93.31:0,93,1376	0/0:25,0:25:69.18:0,69,988	0/0:19,0:19:57.17:0,57,830	1/1:0,34:34:99:1324,102,0	1/1:0,26:26:66.21:856,66,0	1/1:1,1:2:6:63,6,0
chr10	100008969	.	CTG	C	463.48	PASS	AB=0.839;AC=7;AF=0.135;AN=52;BaseQRankSum=8.391;DP=558;FS=1.318;HRun=0;HaplotypeScore=90.6290;InbreedingCoeff=-0.1578;MQ=49.77;MQ0=14;MQRankSum=-2.722;QD=2.56;ReadPosRankSum=-3.099;VQSLOD=1.0475;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:19:18.43:0,18,236	0/0:13,0:13:36.09:0,36,610	./.	./.	0/0:21,0:20:26.09:0,26,755	0/0:26,0:24:66.15:0,66,1046	0/0:20,0:20:48.14:0,48,872	0/1:72,2:69:22.32:22,0,2344	0/0:17,0:17:11.26:0,11,300	0/0:28,0:28:78.68:0,79,1368	0/0:17,0:15:36.08:0,36,608	0/0:14,0:14:36.01:0,36,655	0/0:19,0:19:57.16:0,57,989	0/0:18,0:18:48.16:0,48,924	0/0:18,0:16:44.91:0,45,735	0/0:24,0:24:69.14:0,69,1091	0/0:32,0:32:93.32:0,93,1758	0/0:7,0:7:20.55:0,21,203	0/1:14,8:14:99:115,0,246	0/1:16,4:19:96.77:98,0,97	0/1:10,2:10:27.16:27,0,115	0/0:20,0:20:42.14:0,42,789	0/0:13,0:13:29.82:0,30,479	0/0:22,0:22:54.10:0,54,976	0/0:20,0:20:54.11:0,54,969	0/1:19,4:21:99:189,0,311	0/1:11,8:19:63.90:64,0,499	0/1:10,1:10:76.86:77,0,267
chr10	100008977	.	CTG	C	784.22	PASS	AB=0.904;AC=9;AF=0.167;AN=54;BaseQRankSum=9.439;DP=561;FS=1.745;HRun=0;HaplotypeScore=92.9597;InbreedingCoeff=-0.1998;MQ=49.89;MQ0=11;MQRankSum=-1.874;QD=4.00;ReadPosRankSum=-0.574;VQSLOD=1.7812;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:18:9.48:0,9,120	0/0:12,0:12:32.41:0,32,497	0/0:3,0:2:3.85:0,4,11	./.	0/0:27,1:27:10.73:0,11,873	0/0:28,0:26:51.85:0,52,1293	0/0:24,0:24:52.02:0,52,820	0/1:71,0:68:99:105,0,656	0/1:9,8:17:99:104,0,126	0/0:28,0:28:72.04:0,72,1181	0/0:17,0:15:38.79:0,39,646	0/0:14,0:14:9.38:0,9,456	0/0:19,0:19:54.03:0,54,863	0/0:19,0:19:51.11:0,51,828	0/0:16,0:14:39.06:0,39,608	0/0:17,0:17:51.11:0,51,808	0/0:32,0:32:77.73:0,78,1261	0/1:2,3:5:25.95:93,0,26	0/1:21,0:16:91.29:120,0,91	0/1:19,2:20:30.66:95,0,31	0/1:9,0:7:17.98:36,0,18	0/0:22,0:22:48.01:0,48,748	0/0:16,0:16:35.92:0,36,529	0/0:21,0:21:51.08:0,51,873	0/0:23,0:23:61.37:0,61,957	0/1:20,2:20:99:194,0,114	0/1:19,0:19:96.78:97,0,174	0/1:11,0:10:78.92:79,0,109
chr10	100010279	.	CT	C	4260.77	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.855;DP=654;FS=30.741;HRun=10;HaplotypeScore=88.8879;InbreedingCoeff=0.9679;MQ=79.70;MQ0=0;MQRankSum=-2.199;QD=18.37;ReadPosRankSum=3.759;VQSLOD=3.7340;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,43:46:99:982,109,0	0/0:1,0:1:3.01:0,3,33	0/0:51,0:35:41.24:0,41,526	0/0:35,0:30:33.29:0,33,395	0/0:21,0:21:48.11:0,48,522	0/0:21,0:22:63:0,63,676	0/0:20,0:20:54.13:0,54,589	1/1:18,19:37:62.91:541,63,0	1/1:2,13:15:31.26:283,31,0	0/0:25,0:25:34.80:0,35,605	0/0:14,0:14:36.10:0,36,398	0/0:19,0:19:51.10:0,51,534	0/0:18,0:18:50.39:0,50,546	0/0:26,0:26:78.20:0,78,854	0/0:24,1:25:46.11:0,46,720	0/0:26,1:27:55.17:0,55,836	0/0:40,0:42:99:0,111,1208	1/1:3,14:17:32.99:286,33,0	1/1:4,17:21:47.97:416,48,0	1/1:2,9:11:20.54:182,21,0	1/1:3,11:14:23.97:208,24,0	0/0:13,0:13:36.10:0,36,398	0/0:10,0:10:30.07:0,30,321	0/0:23,0:25:65.99:0,66,701	0/0:25,0:25:60.14:0,60,653	1/1:6,24:30:11.60:555,12,0	1/1:0,25:25:53.67:468,54,0	1/1:2,14:16:38.99:338,39,0
chr10	100011151	.	TC	T	3102.42	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=6.427;DP=275;FS=0.475;HRun=4;HaplotypeScore=29.9067;InbreedingCoeff=0.9419;MQ=92.44;MQ0=0;MQRankSum=-1.738;QD=29.55;ReadPosRankSum=1.991;VQSLOD=2.5781;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.17:0,51,714	0/0:1,0:1:3.01:0,3,42	0/0:16,0:14:39.10:0,39,492	0/0:14,0:14:32.86:0,33,403	0/0:8,0:8:21.07:0,21,293	0/0:9,0:9:27.09:0,27,377	0/0:10,0:10:27.09:0,27,377	1/1:1,11:12:33.07:372,33,0	1/1:2,13:15:42.13:503,42,0	0/0:3,0:3:9.03:0,9,126	0/0:5,0:5:12.04:0,12,167	0/0:6,0:6:18.06:0,18,251	0/0:10,0:10:30.08:0,30,401	0/0:8,0:8:24.08:0,24,336	0/0:6,0:6:18.05:0,18,235	0/0:12,0:12:36.11:0,36,488	0/0:8,0:8:21.07:0,21,294	1/1:3,7:10:21.06:250,21,0	1/1:0,11:11:33.10:394,33,0	1/1:0,13:13:30.09:360,30,0	1/1:1,9:10:21.06:247,21,0	0/0:4,0:4:9.03:0,9,126	0/0:7,0:7:21.06:0,21,276	0/0:9,0:9:24.08:0,24,336	0/0:15,0:15:45.15:0,45,629	1/1:1,7:8:21.06:251,21,0	1/1:0,20:20:60.18:719,60,0	1/1:0,6:6:18.06:216,18,0
chr10	100013019	.	G	GTATGTGTGTGTA	23642.36	PASS	AB=0.576;AC=19;AF=0.339;AN=56;BaseQRankSum=-14.832;DP=777;FS=0.344;HRun=0;HaplotypeScore=218.9643;InbreedingCoeff=0.9020;MQ=65.81;MQ0=1;MQRankSum=-12.928;QD=78.55;ReadPosRankSum=-2.649;VQSLOD=3.6477;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,27:44:32.37:2147,32,0	0/0:14,0:14:32.13:0,32,1003	0/0:27,0:23:51.09:0,51,1096	0/0:28,0:26:56.97:0,57,1553	0/0:32,0:32:72.25:0,72,2470	0/0:17,0:17:51.16:0,51,1677	0/0:29,0:29:63.19:0,63,1978	1/1:9,17:47:99:4138,114,0	1/1:3,22:32:51.17:3049,51,0	0/0:32,0:32:78.21:0,78,2168	0/0:21,0:21:57.18:0,57,1796	0/0:33,0:33:87.24:0,87,2813	0/0:18,0:18:51.17:0,51,1716	0/0:32,0:32:78.25:0,78,2615	0/0:29,0:29:75.24:0,75,2426	0/0:18,0:18:39.13:0,39,1345	0/0:35,0:35:76.89:0,77,2546	0/1:5,9:19:86.94:1057,0,87	1/1:5,11:27:72.14:2383,72,0	1/1:1,27:39:57.20:3405,57,0	1/1:6,11:18:9.03:538,9,0	0/0:23,0:23:54.17:0,54,1861	0/0:26,0:26:75.23:0,75,2225	0/0:44,0:44:99:0,114,3797	0/0:18,0:18:45.13:0,45,1306	1/1:4,24:33:69.22:3706,69,0	1/1:2,21:32:44.90:2681,45,0	1/1:1,3:10:9.03:539,9,0
chr10	100014291	.	T	TG	5983.76	PASS	AB=0.568;AC=19;AF=0.339;AN=56;BaseQRankSum=-12.619;DP=567;FS=6.042;HRun=6;HaplotypeScore=59.0609;InbreedingCoeff=0.9314;MQ=85.15;MQ0=0;MQRankSum=-2.792;QD=30.84;ReadPosRankSum=1.484;VQSLOD=5.5586;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:35:87.28:1094,87,0	0/0:8,0:8:24.04:0,24,239	0/0:21,0:21:42.95:0,43,414	0/0:17,0:17:27.11:0,27,284	0/0:23,0:23:63.14:0,63,641	0/0:21,0:21:54.12:0,54,550	0/0:29,0:29:87.20:0,87,887	1/1:2,15:17:45.13:554,45,0	1/1:1,13:14:33.10:412,33,0	0/0:18,0:18:48.11:0,48,490	0/0:23,0:23:57.11:0,57,575	0/0:22,0:22:51.11:0,51,520	0/0:18,0:18:39.08:0,39,398	0/0:7,0:7:18:0,18,173	0/0:22,0:22:66.12:0,66,659	0/0:17,0:17:45.10:0,45,459	0/0:40,0:40:99:0,111,1124	1/1:2,14:16:17.54:532,18,0	1/1:3,7:10:21.07:264,21,0	1/1:2,22:25:66.21:819,66,0	1/1:2,21:23:54.17:679,54,0	0/0:20,0:20:57.08:0,57,564	0/0:25,0:25:60.11:0,60,603	0/0:25,0:25:69.13:0,69,690	0/0:17,0:17:45.09:0,45,453	0/1:5,16:21:5.69:514,0,6	1/1:2,26:28:75.21:926,75,0	1/1:0,5:5:15.05:189,15,0
chr10	100015059	.	CGT	C	1098.09	PASS	AB=0.808;AC=10;AF=0.179;AN=56;BaseQRankSum=11.333;DP=1009;FS=77.326;HRun=0;HaplotypeScore=164.2502;InbreedingCoeff=-0.2129;MQ=54.09;MQ0=10;MQRankSum=-6.003;QD=3.57;ReadPosRankSum=-0.497;VQSLOD=-0.1161;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,3:36:7.01:7,0,253	0/0:14,0:14:39.08:0,39,704	0/0:41,1:20:43.26:0,43,795	0/0:40,0:25:64.86:0,65,1115	0/0:31,1:32:50.04:0,50,1736	0/0:25,0:25:69.20:0,69,1231	0/0:50,0:50:99:0,144,2675	0/1:41,5:41:99:222,0,1464	0/1:26,11:36:43.94:44,0,474	0/0:45,0:45:99:0,135,2480	0/0:20,0:20:56.22:0,56,1031	0/0:45,0:45:99:0,132,2374	0/0:39,0:39:93.11:0,93,1866	0/0:39,0:39:90.03:0,90,1950	0/0:52,0:52:99:0,153,2770	0/0:58,0:58:99:0,159,2966	0/0:44,0:44:99:0,124,2255	0/1:17,2:20:99:186,0,328	0/1:16,2:17:93.01:93,0,320	0/1:12,14:28:99:119,0,165	0/1:45,3:45:43.89:44,0,717	0/0:45,0:46:99:0,107,2186	0/0:25,0:25:72.22:0,72,1271	0/0:43,0:44:99:0,123,2295	0/0:40,1:41:75.87:0,76,1988	0/1:18,11:32:99:399,0,736	0/1:19,2:25:99:101,0,524	0/1:7,1:8:26:26,0,264
chr10	100015245	.	GACACACATACACACACATAC	G	4931.90	PASS	AB=0.648;AC=10;AF=0.179;AN=56;BaseQRankSum=10.051;DP=1144;FS=8.286;HRun=0;HaplotypeScore=514.6420;InbreedingCoeff=0.7369;MQ=55.45;MQ0=21;MQRankSum=-1.621;QD=24.06;ReadPosRankSum=-4.618;VQSLOD=0.9173;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:51.18:0,51,2487	0/0:15,0:15:33.11:0,33,2329	0/0:47,0:16:9.03:0,9,249	0/0:55,0:24:29.77:0,30,901	0/0:33,0:33:75.26:0,75,4789	0/0:29,0:29:66.22:0,66,4110	0/0:39,0:39:78.25:0,78,3707	1/1:48,26:69:75.20:1448,75,0	0/0:56,0:56:99:0,99,5110	0/0:50,0:50:99:0,114,7021	0/0:29,0:29:66.23:0,66,3529	0/0:67,0:67:99:0,138,9010	0/0:60,0:60:99:0,135,8122	0/0:46,0:46:99:0,105,5925	0/0:70,0:70:99:0,146,10633	0/0:62,0:62:99:0,160,10803	0/0:43,0:43:81.38:0,81,5832	0/0:27,0:27:41.97:0,42,1597	1/1:13,12:22:36.12:1026,36,0	0/0:13,27:40:1:0,1,4	1/1:39,0:37:5.76:118,6,0	0/0:47,0:46:99:0,114,7350	0/0:31,0:31:81.28:0,81,4604	0/0:23,0:23:43.66:0,44,2771	0/0:35,0:35:84.26:0,84,5546	0/1:17,28:44:99:2131,0,212	0/1:9,8:17:0:0,0,0	1/1:4,0:4:6.02:209,6,0
chr10	100015253	.	T	TAC	2901.81	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=10.938;DP=1103;FS=4.350;HRun=0;HaplotypeScore=168.6138;InbreedingCoeff=0.6481;MQ=54.80;MQ0=25;MQRankSum=3.768;QD=13.62;ReadPosRankSum=3.389;VQSLOD=3.3833;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:35:51.17:853,51,0	0/0:15,0:15:39.11:0,39,490	0/0:45,1:12:12.04:0,12,144	0/0:55,0:18:26.97:0,27,315	0/0:32,0:32:84.24:0,84,1057	0/0:30,0:30:72.22:0,72,921	0/0:36,0:36:90.24:0,90,1110	0/0:62,0:58:49.66:0,50,369	1/1:3,50:53:99:1647,99,0	0/0:50,0:50:99:0,135,1730	0/0:32,0:32:78.25:0,78,1010	0/0:60,0:60:99:0,156,1966	0/0:60,0:60:99:0,150,1915	0/0:44,0:44:99:0,114,1421	0/0:68,0:68:99:0,168,2127	0/0:66,0:66:99:0,175,2244	0/0:42,0:42:94.74:0,95,1225	1/1:9,11:20:15.66:524,16,0	0/1:27,0:22:1.06:1,0,70	0/1:36,0:36:0.30:0,0,0	0/0:34,0:32:0.74:0,1,1	0/0:47,0:46:99:0,117,1492	0/0:33,0:33:90.27:0,90,1150	0/0:25,0:25:49.38:0,49,626	0/0:36,0:36:96.25:0,96,1187	0/1:42,0:41:20.38:20,0,158	0/0:15,0:15:2.86:0,3,24	0/0:2,0:2:3.85:0,4,21
chr10	100015261	.	CAT	C	1033.50	PASS	AB=0.965;AC=6;AF=0.107;AN=56;BaseQRankSum=11.641;DP=1076;FS=3.203;HRun=0;HaplotypeScore=169.8054;InbreedingCoeff=0.2060;MQ=52.88;MQ0=29;MQRankSum=-3.693;QD=7.08;ReadPosRankSum=-3.823;VQSLOD=2.6611;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:37.88:0,38,128	0/0:13,0:13:39.13:0,39,751	0/0:42,0:6:12.04:0,12,196	0/0:58,0:14:26.64:0,27,412	0/0:31,0:31:93.07:0,93,1580	0/0:30,0:30:81.23:0,81,1451	0/0:38,0:38:99:0,105,1614	0/1:51,0:48:99:487,0,327	0/0:53,0:53:69.12:0,69,206	0/0:49,0:49:99:0,144,2598	0/0:31,0:31:90.18:0,90,1478	0/0:59,0:59:99:0,165,2960	0/0:55,0:55:99:0,153,2698	0/0:43,0:43:99:0,120,2040	0/0:70,0:70:99:0,177,3317	0/0:67,0:67:99:0,196,3446	0/0:43,0:43:91.12:0,91,1786	0/0:21,0:21:8.48:0,8,71	0/1:19,0:16:10.96:224,0,11	0/0:30,0:30:0.79:0,1,2	0/1:30,6:35:23.98:116,0,24	0/0:50,0:49:99:0,132,2338	0/0:36,0:36:99:0,108,1761	0/0:27,0:27:50.83:0,51,920	0/0:35,0:35:99:0,105,1790	0/1:35,0:34:98.64:275,0,99	0/0:11,0:11:2.86:0,3,24	1/1:0,4:4:5.98:54,6,0
chr10	100015355	.	TAC	T	1984.26	PASS	AB=0.578;AC=5;AF=0.089;AN=56;BaseQRankSum=10.125;DP=1156;FS=7.274;HRun=0;HaplotypeScore=163.8197;InbreedingCoeff=0.7448;MQ=58.62;MQ0=6;MQRankSum=3.099;QD=17.72;ReadPosRankSum=1.783;VQSLOD=3.3138;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,40:45:72.23:916,72,0	0/0:10,0:10:28.34:0,28,443	0/0:35,0:16:29.56:0,30,401	0/0:34,0:26:43.45:0,43,626	0/0:33,1:34:52.10:0,52,1364	0/0:35,0:35:81.02:0,81,1292	0/0:29,0:29:72.25:0,72,1195	0/0:51,0:51:72:0,72,1573	1/1:1,39:40:66.20:841,66,0	0/0:77,0:77:99:0,205,3139	0/0:36,0:36:87.28:0,87,1420	0/0:59,1:59:99:0,110,2322	0/0:49,0:49:99:0,138,2238	0/0:49,0:49:99:0,135,2141	0/0:62,0:62:99:0,150,2430	0/0:46,0:46:99:0,126,1984	0/0:34,1:34:75.18:0,75,1174	0/1:7,18:26:6.97:357,0,7	0/0:18,1:15:0.83:0,1,477	0/0:32,0:32:78.24:0,78,1273	0/0:100,0:100:99:0,201,3050	0/0:48,0:48:99:0,129,2042	0/0:38,0:38:99:0,99,1557	0/0:53,0:53:99:0,129,2022	0/0:35,0:35:89.90:0,90,1332	0/0:41,0:41:99:0,108,1635	0/0:25,0:25:66.19:0,66,1032	0/0:10,0:10:24.08:0,24,390
chr10	100015471	.	G	GAC	43.51	PASS	AB=0.952;AC=6;AF=0.107;AN=56;BaseQRankSum=7.084;DP=882;FS=1.854;HRun=0;HaplotypeScore=144.7182;InbreedingCoeff=-0.1128;MQ=53.41;MQ0=14;MQRankSum=-3.483;QD=0.31;ReadPosRankSum=-4.630;VQSLOD=1.0698;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:43:77.02:0,77,803	0/0:14,0:14:39.12:0,39,533	0/0:30,0:10:27.06:0,27,349	0/0:35,0:19:40.74:0,41,521	0/0:29,0:29:75.62:0,76,992	0/0:22,0:20:60.19:0,60,839	0/0:24,0:23:63.21:0,63,901	0/1:34,0:34:31.21:31,0,737	0/0:35,0:33:13.50:0,13,585	0/0:33,0:33:85.47:0,85,1181	0/0:13,0:13:30.10:0,30,429	0/0:28,0:28:75.18:0,75,1040	0/0:42,0:40:99:0,114,1549	0/0:46,0:45:99:0,120,1628	0/0:27,0:27:78.23:0,78,1067	0/0:33,0:32:93.30:0,93,1312	0/0:32,0:32:90.21:0,90,1204	0/0:17,0:15:32.81:0,33,331	0/1:25,0:23:42.96:43,0,607	0/1:20,0:20:2.87:3,0,94	0/0:87,0:84:78.89:0,79,1413	0/0:28,0:26:69.23:0,69,985	0/0:23,0:23:66.22:0,66,944	0/0:53,0:55:99:0,141,1954	0/0:43,0:43:99:0,111,1538	0/1:24,0:22:15.79:16,0,702	0/1:26,0:25:38.96:39,0,423	0/1:6,3:10:30.21:30,0,130
chr10	100017479	.	C	CTT	531.98	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.052;DP=584;FS=0.922;HRun=10;HaplotypeScore=78.0796;InbreedingCoeff=0.9760;MQ=72.05;MQ0=0;MQRankSum=0.176;QD=21.28;ReadPosRankSum=-0.817;VQSLOD=2.8592;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:25:42.12:627,42,0	0/0:8,0:8:17.99:0,18,172	0/0:10,0:10:25.55:0,26,271	0/0:15,0:15:16.96:0,17,183	0/0:35,0:35:72.05:0,72,725	0/0:23,0:23:57.09:0,57,580	0/0:18,0:18:45.03:0,45,443	0/0:22,0:22:54.11:0,54,549	0/0:17,0:17:39.07:0,39,397	0/0:21,0:21:51.03:0,51,512	0/0:25,0:25:51.01:0,51,505	0/0:10,0:10:24.03:0,24,244	0/0:23,0:23:60.06:0,60,602	0/0:14,0:14:33.04:0,33,336	0/0:19,0:19:45.01:0,45,438	0/0:18,0:18:53.85:0,54,531	0/0:20,0:20:48.08:0,48,488	0/0:26,0:27:62.86:0,63,622	0/0:27,0:27:62.15:0,62,639	0/0:33,0:34:92.91:0,93,927	0/0:22,0:22:44.98:0,45,449	0/0:22,0:22:48.04:0,48,488	0/0:17,0:17:39:0,39,382	0/0:32,0:34:92.62:0,93,901	0/0:21,0:22:41.98:0,42,479	0/0:15,0:16:23.77:0,24,296	0/0:24,0:24:54.05:0,54,543	0/0:15,0:15:45.10:0,45,458
chr10	100017763	.	CCTAT	C	3637.12	PASS	AB=0.864;AC=28;AF=0.583;AN=48;BaseQRankSum=-0.921;DP=609;FS=35.410;HRun=0;HaplotypeScore=129.1091;InbreedingCoeff=0.5978;MQ=55.14;MQ0=9;MQRankSum=3.389;QD=10.27;ReadPosRankSum=0.977;VQSLOD=1.4908;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,1:20:6.07:6,0,265	1/1:7,4:11:15.05:231,15,0	./.	./.	0/0:25,1:26:27.09:0,27,602	1/1:19,12:31:30:410,30,0	./.	0/0:35,0:34:18.06:0,18,249	1/1:18,9:26:6.79:324,7,0	1/1:23,13:36:54.13:760,54,0	1/1:24,6:29:11.95:155,12,0	0/0:14,0:14:24.05:0,24,469	0/1:8,16:24:4.92:213,0,5	./.	1/1:10,9:19:9.03:138,9,0	1/1:8,15:22:19.79:265,20,0	1/1:13,1:14:6.02:92,6,0	0/1:13,1:12:47.01:47,0,68	0/0:6,0:10:15.05:0,15,265	0/0:24,0:25:11.99:0,12,152	0/0:15,0:15:5.84:0,6,53	1/1:11,4:15:11.97:156,12,0	1/1:7,7:14:6.02:92,6,0	1/1:12,9:21:16.87:236,17,0	1/1:9,17:26:35.99:498,36,0	0/1:18,1:26:13.01:13,0,493	0/0:27,0:35:14.99:0,15,177	0/0:33,0:31:51.14:0,51,801
chr10	100017812	.	CTACCA	C	112.46	PASS	AB=0.856;AC=6;AF=0.115;AN=52;BaseQRankSum=3.212;DP=574;FS=2.578;HRun=0;HaplotypeScore=160.3428;InbreedingCoeff=0.0177;MQ=45.55;MQ0=42;MQRankSum=-4.185;QD=1.14;ReadPosRankSum=-4.480;VQSLOD=1.1806;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:15:12.34:0,12,285	0/0:7,0:7:20.99:0,21,270	./.	./.	0/0:31,0:31:60.05:0,60,1330	0/0:23,0:23:2.62:0,3,177	1/1:9,0:7:0.62:2,1,0	0/0:38,0:28:55.27:0,55,1103	0/0:31,0:30:12:0,12,224	0/0:29,0:28:39.64:0,40,516	0/0:22,0:23:10.78:0,11,73	0/0:19,0:18:54.17:0,54,1241	0/0:27,0:27:19.77:0,20,632	0/0:16,0:16:27.09:0,27,654	0/0:19,0:19:33.09:0,33,671	0/0:21,0:19:24.46:0,24,494	0/0:12,0:12:14.12:0,14,474	0/1:11,0:12:94.23:94,0,274	0/0:17,0:15:33.11:0,33,621	0/1:32,5:36:28.15:28,0,829	0/1:12,0:13:47.65:48,0,392	0/0:17,0:12:12.25:0,12,86	0/0:20,0:18:33.56:0,34,702	0/0:19,0:17:20.94:0,21,421	0/0:19,3:22:4.34:0,4,246	0/0:23,1:21:36.07:0,36,734	0/0:25,0:23:37.48:0,37,819	0/1:17,9:23:48.76:49,0,262
chr10	100017817	.	A	ATATC	1106.70	PASS	AB=1.000;AC=19;AF=0.365;AN=52;BaseQRankSum=0.148;DP=563;FS=1.815;HRun=0;HaplotypeScore=154.9099;InbreedingCoeff=0.6242;MQ=45.88;MQ0=40;MQRankSum=-1.181;QD=4.52;ReadPosRankSum=-3.595;VQSLOD=1.9779;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:15:0:0,0,0	0/0:7,0:7:6.02:0,6,92	./.	./.	0/0:28,0:28:35.93:0,36,540	1/1:16,8:24:9.03:204,9,0	1/1:12,0:10:1.25:3,1,0	1/1:31,0:21:1.25:3,1,0	0/1:18,0:29:4.28:4,0,22	1/1:21,10:31:30:675,30,0	1/1:13,9:23:2.98:70,3,0	0/0:18,0:17:39.13:0,39,595	0/0:26,0:26:21.07:0,21,320	0/0:17,0:17:27.09:0,27,412	0/0:20,0:20:24.08:0,24,366	0/0:23,0:21:15.05:0,15,229	0/0:14,0:13:24.08:0,24,360	1/1:13,0:12:5.98:46,6,0	0/0:14,0:13:15.05:0,15,229	0/0:38,0:37:41.88:0,42,640	0/0:12,0:11:18.06:0,18,270	1/1:16,0:11:1.80:5,2,0	0/0:19,0:17:26.89:0,27,368	0/0:15,0:14:12.04:0,12,183	1/1:22,0:22:9.03:209,9,0	0/0:26,0:23:33.11:0,33,495	0/0:27,0:25:30.08:0,30,436	0/1:21,0:19:43.19:43,0,184
chr10	100017947	.	G	GTCTATCTATCTA	5729.70	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=3.250;DP=602;FS=0.485;HRun=0;HaplotypeScore=205.1895;InbreedingCoeff=0.9108;MQ=53.65;MQ0=1;MQRankSum=-6.234;QD=23.97;ReadPosRankSum=-3.216;VQSLOD=3.2704;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:33:3.01:59,3,0	0/0:8,0:8:24.08:0,24,844	0/0:12,0:8:6.02:0,6,106	0/0:12,0:7:8.68:0,9,195	0/0:28,0:28:60.19:0,60,1794	0/0:22,0:22:51.05:0,51,1344	0/0:8,0:7:18.06:0,18,589	1/1:31,0:26:30:375,30,0	1/1:22,0:19:14.96:130,15,0	0/0:43,0:43:87.24:0,87,2222	0/0:25,0:25:62.99:0,63,1576	0/0:17,0:17:33.08:0,33,826	0/0:28,0:27:51.13:0,51,1436	0/0:19,0:19:36.04:0,36,881	0/0:22,0:22:51.17:0,51,1614	0/0:22,0:22:63.15:0,63,1881	0/0:18,0:17:44.98:0,45,1241	1/1:13,0:13:15.04:209,15,0	1/1:8,0:7:12.04:273,12,0	1/1:32,1:33:39.01:788,39,0	1/1:11,8:19:3.48:178,3,0	0/0:17,0:17:39.10:0,39,1039	0/0:23,0:23:54.18:0,54,1558	0/0:17,0:17:29.07:0,29,747	0/0:22,0:22:57.16:0,57,1735	1/1:7,18:26:52.34:1925,52,0	1/1:27,0:27:37.64:1253,38,0	1/1:9,11:23:15.05:541,15,0
chr10	100017965	.	CTACCA	C	1134.14	PASS	AB=0.967;AC=10;AF=0.179;AN=56;BaseQRankSum=5.782;DP=574;FS=6.907;HRun=0;HaplotypeScore=136.4957;InbreedingCoeff=0.0136;MQ=54.53;MQ0=1;MQRankSum=-4.357;QD=6.10;ReadPosRankSum=-0.520;VQSLOD=2.1350;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:22:69.17:105,0,69	0/0:9,0:9:27.09:0,27,835	0/0:8,0:4:12.02:0,12,221	0/0:13,0:7:12.93:0,13,268	0/0:29,0:29:81.28:0,81,2391	0/0:23,0:22:60.08:0,60,1479	0/0:9,0:8:21.07:0,21,603	0/1:24,4:25:99:146,0,1411	0/1:21,0:19:26.99:27,0,814	0/0:42,0:42:99:0,117,3217	0/0:31,0:31:87.20:0,87,2299	0/0:15,0:15:42.14:0,42,1177	0/0:26,0:25:60.21:0,60,1810	0/0:19,0:19:51.13:0,51,1424	0/0:24,0:24:66.23:0,66,1941	0/0:26,0:26:78.24:0,78,2199	0/0:19,0:18:47.99:0,48,1189	1/1:5,0:5:14.81:194,15,0	0/1:5,1:6:99:107,0,317	0/1:27,0:27:99:143,0,860	0/0:17,0:16:17.01:0,17,240	0/0:14,0:14:39.13:0,39,1173	0/0:24,0:24:66.21:0,66,1857	0/0:14,0:14:30.10:0,30,883	0/0:26,0:26:78.27:0,78,2298	0/1:28,0:26:99:312,0,810	0/1:27,0:26:99:208,0,1203	0/1:21,0:21:42.38:42,0,840
chr10	100018055	.	CATCT	C	1329.74	PASS	AB=0.920;AC=7;AF=0.125;AN=56;BaseQRankSum=6.251;DP=598;FS=2.019;HRun=0;HaplotypeScore=148.8879;InbreedingCoeff=0.4422;MQ=53.63;MQ0=6;MQRankSum=1.232;QD=10.00;ReadPosRankSum=2.518;VQSLOD=2.7066;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,1:12:7.76:100,8,0	0/0:12,0:12:36.11:0,36,752	0/0:23,0:12:36.03:0,36,558	0/0:7,0:5:12.04:0,12,188	0/0:29,0:29:59.20:0,59,926	0/0:20,0:20:57.18:0,57,1215	0/0:13,0:13:24.08:0,24,494	0/0:35,0:29:87.26:0,87,1392	1/1:22,4:24:46.93:667,47,0	0/0:38,0:38:99:0,108,2312	0/0:28,0:27:75.26:0,75,1579	0/0:21,0:21:54.18:0,54,1122	0/0:13,0:12:20.95:0,21,317	0/0:19,0:19:51.17:0,51,1075	0/0:23,0:22:29.98:0,30,372	0/0:17,0:17:48.12:0,48,863	0/0:28,0:29:40:0,40,1313	0/1:12,1:13:10.43:232,0,10	0/0:13,0:13:39.11:0,39,625	0/1:44,6:50:99:394,0,952	0/0:14,0:14:11.04:0,11,197	0/0:14,0:13:1.43:0,1,231	0/0:25,0:24:66.19:0,66,1410	0/0:14,0:14:36.12:0,36,754	0/0:25,0:25:69.16:0,69,1564	0/0:15,0:15:44.98:0,45,750	0/1:28,2:29:72.91:73,0,888	0/0:17,0:15:39.69:0,40,539
chr10	100018056	.	A	ATCTG	2401.63	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=2.125;DP=600;FS=1.183;HRun=0;HaplotypeScore=147.9334;InbreedingCoeff=0.5322;MQ=53.67;MQ0=6;MQRankSum=-0.729;QD=14.92;ReadPosRankSum=2.233;VQSLOD=3.6262;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,4:12:4.39:237,4,0	0/0:12,0:12:36.11:0,36,651	0/0:23,0:12:36.12:0,36,633	0/0:7,0:5:12.04:0,12,217	0/0:30,0:30:55.86:0,56,952	0/0:20,0:20:57.18:0,57,1046	0/0:15,0:14:9.70:0,10,423	0/0:35,0:29:86.89:0,87,784	1/1:22,3:23:56.64:1096,57,0	0/0:38,0:38:99:0,108,1979	0/0:29,0:28:75.26:0,75,1405	0/0:20,0:20:54.19:0,54,1015	0/0:13,0:12:7.07:0,7,244	0/0:19,0:19:51.17:0,51,957	0/0:23,0:22:45.15:0,45,834	0/0:17,0:17:48.12:0,48,793	0/1:29,0:29:8.50:9,0,1185	1/1:11,2:13:30.31:492,30,0	0/0:13,0:13:38.88:0,39,358	0/1:50,0:50:99:572,0,520	0/0:14,0:14:11.65:0,12,122	0/0:14,0:13:24.08:0,24,443	0/0:26,0:25:66.19:0,66,1171	0/0:14,0:14:36.12:0,36,682	0/0:25,0:25:69.22:0,69,1270	0/0:15,0:15:44.96:0,45,532	0/1:30,0:29:99:146,0,614	0/0:17,0:15:35.87:0,36,356
chr10	100018064	.	GTCTA	G	463.05	PASS	AB=1.000;AC=9;AF=0.173;AN=52;BaseQRankSum=5.507;DP=604;FS=6.814;HRun=0;HaplotypeScore=159.0125;InbreedingCoeff=0.2966;MQ=53.95;MQ0=6;MQRankSum=-2.660;QD=2.74;ReadPosRankSum=-2.070;VQSLOD=1.8471;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:15:0.35:0,0,51	0/0:11,0:11:18.06:0,18,368	./.	./.	0/0:17,0:30:15.11:0,15,117	0/0:20,0:20:36.09:0,36,711	0/0:16,0:15:18.03:0,18,284	0/0:35,0:27:1.24:0,1,3	0/1:26,0:24:31.52:32,0,163	0/0:40,0:40:69.20:0,69,1346	0/0:29,0:29:51.14:0,51,1028	0/0:21,0:21:33.11:0,33,653	0/0:8,0:18:11.90:0,12,117	0/0:18,0:18:27.09:0,27,587	1/1:9,17:25:24.07:355,24,0	0/0:16,0:16:24.06:0,24,405	0/0:31,0:31:43.80:0,44,792	0/0:14,0:14:2.90:0,3,104	0/0:11,0:11:6.01:0,6,56	0/1:52,0:52:21.29:21,0,43	0/0:14,0:14:5.85:0,6,44	1/1:7,9:14:9.92:142,10,0	0/0:23,1:23:45.13:0,45,910	0/0:15,0:15:21.04:0,21,386	0/0:24,0:24:45.13:0,45,873	0/1:15,0:15:5.81:6,0,150	0/0:26,0:25:20.43:0,20,181	0/1:17,0:15:41.98:42,0,67
chr10	100018085	.	TCTATCTATCTATCTATCTATCTAC	T	4055.47	PASS	AB=0.902;AC=12;AF=0.214;AN=56;BaseQRankSum=8.313;DP=575;FS=0.961;HRun=0;HaplotypeScore=334.6108;InbreedingCoeff=0.5175;MQ=52.51;MQ0=8;MQRankSum=-6.046;QD=23.17;ReadPosRankSum=-3.840;VQSLOD=0.5643;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:12.95:0,13,409	0/0:13,0:13:33.09:0,33,859	0/0:7,0:2:2.99:0,3,24	0/0:4,0:2:3:0,3,28	0/0:30,0:30:51.16:0,51,1127	0/0:23,0:23:60.18:0,60,2216	0/0:14,0:13:24.86:0,25,811	1/1:28,0:20:39.31:349,39,0	0/0:24,0:23:53.11:0,53,1325	0/0:36,0:36:96.30:0,96,4068	0/0:27,0:27:75.21:0,75,2965	0/0:18,0:18:48.15:0,48,1766	0/0:19,0:18:25.30:0,25,812	0/0:15,0:15:42.13:0,42,1936	0/0:24,0:23:42.11:0,42,1565	0/0:18,0:18:51.14:0,51,1983	0/0:28,0:28:45.78:0,46,2040	0/1:24,0:23:32.84:33,0,526	1/1:8,0:7:15.02:284,15,0	0/1:16,29:45:99:199,0,129	1/1:15,0:15:9.06:182,9,0	0/0:18,0:16:25.43:0,25,799	0/0:26,0:25:63.18:0,63,2474	0/0:12,0:12:30.10:0,30,1246	0/0:25,0:25:69.12:0,69,2319	0/1:17,0:17:99:1102,0,103	0/1:25,0:25:8.45:1098,0,8	1/1:13,0:11:30.05:808,30,0
chr10	100018105	.	TCTAC	T	1784.70	PASS	AB=0.976;AC=12;AF=0.214;AN=56;BaseQRankSum=6.621;DP=559;FS=5.213;HRun=0;HaplotypeScore=147.8332;InbreedingCoeff=0.0306;MQ=54.53;MQ0=9;MQRankSum=-4.720;QD=8.22;ReadPosRankSum=-0.792;VQSLOD=2.5188;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:18:4.02:86,0,4	0/0:10,0:10:30.03:0,30,440	0/0:14,0:8:17.21:0,17,204	0/0:6,0:3:5.03:0,5,42	0/0:28,0:28:56.93:0,57,487	0/0:20,0:20:59.99:0,60,925	0/0:12,0:11:22.27:0,22,339	1/1:29,0:25:48.85:418,49,0	0/1:22,0:22:17.37:241,0,17	0/0:37,0:37:82.14:0,82,1675	0/0:23,0:23:66.11:0,66,1276	0/0:14,0:14:42.03:0,42,705	0/0:19,0:18:24.45:0,24,311	0/0:14,0:14:42.09:0,42,797	0/1:23,0:22:90.22:114,0,90	0/0:20,0:20:56.12:0,56,738	0/0:23,0:23:47.29:0,47,919	0/1:26,0:25:25.80:293,0,26	0/1:11,0:8:15.99:107,0,16	0/0:37,0:37:10.14:0,10,56	0/1:13,0:13:19.10:19,0,25	0/1:18,0:16:50.64:51,0,140	0/0:26,0:25:65.75:0,66,1103	0/0:14,0:14:32.36:0,32,527	0/0:25,0:25:69.02:0,69,1034	0/1:16,1:16:99:217,0,176	0/1:26,0:26:99:233,0,133	0/1:10,3:11:3.04:162,0,3
chr10	100018110	.	C	CA	502.28	PASS	AB=0.808;AC=6;AF=0.107;AN=56;BaseQRankSum=6.220;DP=562;FS=0.000;HRun=0;HaplotypeScore=123.7303;InbreedingCoeff=-0.0057;MQ=55.18;MQ0=8;MQRankSum=-3.974;QD=3.89;ReadPosRankSum=-1.452;VQSLOD=3.0147;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:19:23.17:0,23,244	0/0:9,0:9:27.09:0,27,377	0/0:20,0:14:39.06:0,39,489	0/0:6,0:3:6.49:0,6,85	0/0:27,0:27:61.65:0,62,781	0/0:20,0:20:57.13:0,57,758	0/0:12,0:11:25.25:0,25,299	0/0:31,0:28:81.22:0,81,952	0/0:18,1:20:42.10:0,42,492	0/0:35,0:35:99:0,105,1419	0/0:24,0:24:69.13:0,69,942	0/0:15,0:15:45.14:0,45,612	0/0:19,0:18:31.33:0,31,401	0/0:15,0:15:45.15:0,45,628	0/0:27,0:26:48.15:0,48,635	0/0:19,0:19:57.18:0,57,779	0/0:24,0:24:58.42:0,58,780	0/1:21,4:24:86.28:86,0,526	0/0:10,0:7:21.06:0,21,242	0/1:30,6:36:0.01:0,0,0	0/1:9,2:11:31.67:40,0,32	0/0:19,0:17:33.58:0,34,445	0/0:24,0:23:63.21:0,63,876	0/0:12,0:12:30.06:0,30,419	0/0:25,0:25:75.10:0,75,952	0/1:14,4:17:99:164,0,389	0/1:20,8:28:99:206,0,521	0/1:6,5:9:79.04:123,0,79
chr10	100018161	.	CATCT	C	1160.51	PASS	AB=0.806;AC=5;AF=0.096;AN=52;BaseQRankSum=7.765;DP=673;FS=0.000;HRun=0;HaplotypeScore=145.0722;InbreedingCoeff=0.6538;MQ=60.80;MQ0=5;MQRankSum=1.021;QD=12.22;ReadPosRankSum=-0.969;VQSLOD=3.0902;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:33.11:0,33,751	0/0:7,0:7:9.03:0,9,187	./.	./.	0/0:33,0:33:54.15:0,54,1083	0/0:25,0:25:48.16:0,48,1055	0/0:14,0:14:24.08:0,24,523	0/0:38,0:35:24.08:0,24,374	0/0:25,0:25:57.20:0,57,1269	1/1:21,17:36:2.60:712,3,0	1/1:13,15:27:26.98:418,27,0	0/0:16,0:16:39.13:0,39,842	0/0:22,0:22:39.13:0,39,913	0/0:20,0:20:48.16:0,48,1101	0/0:29,0:29:54.18:0,54,1130	0/0:32,0:32:57.17:0,57,1159	0/0:30,0:30:59.77:0,60,1291	0/1:22,7:29:99:146,0,489	0/0:18,0:17:21.07:0,21,494	0/0:29,0:28:36.12:0,36,821	0/0:15,0:15:18.06:0,18,423	0/0:22,0:20:22.46:0,22,537	0/0:21,0:21:36.12:0,36,817	0/0:19,0:19:32.43:0,32,743	0/0:27,0:27:51.18:0,51,1158	0/0:24,0:24:39.13:0,39,853	0/0:40,0:40:72.25:0,72,1634	0/0:18,0:18:33.11:0,33,725
chr10	100018667	.	TC	T	2653.77	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.253;DP=707;FS=0.946;HRun=2;HaplotypeScore=71.5049;InbreedingCoeff=0.9889;MQ=94.44;MQ0=0;MQRankSum=-6.609;QD=33.17;ReadPosRankSum=2.321;VQSLOD=3.8627;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:38:96.31:1245,96,0	0/0:11,0:11:30.10:0,30,450	0/0:30,0:30:87.28:0,87,1268	0/0:34,0:34:93.11:0,93,1287	0/0:47,0:47:99:0,141,2094	0/0:23,0:23:69.23:0,69,1033	0/0:22,0:22:66.20:0,66,949	0/0:38,0:38:99:0,108,1548	1/1:3,23:26:78.21:968,78,0	0/0:19,0:19:54.18:0,54,810	0/0:22,0:22:66.22:0,66,989	0/0:22,0:22:63.21:0,63,941	0/0:25,0:25:75.23:0,75,1074	0/0:23,0:23:69.22:0,69,1012	0/0:32,0:32:90.29:0,90,1328	0/0:24,0:24:72.23:0,72,1060	0/0:23,0:23:66.18:0,66,944	1/1:3,13:16:45.15:584,45,0	0/0:15,0:15:42.13:0,42,610	0/0:31,0:31:90.29:0,90,1328	0/0:25,0:25:75.25:0,75,1119	0/0:29,0:29:87.29:0,87,1301	0/0:24,0:24:69.22:0,69,1009	0/0:34,0:34:99:0,102,1490	0/0:18,0:17:54.18:0,54,809	0/0:27,0:27:78.26:0,78,1170	0/0:25,0:25:72.24:0,72,1077	0/0:4,0:4:12.04:0,12,180
chr10	100018723	.	T	TC	1896.77	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.843;DP=705;FS=2.235;HRun=3;HaplotypeScore=71.1913;InbreedingCoeff=0.9988;MQ=85.87;MQ0=0;MQRankSum=-6.528;QD=24.96;ReadPosRankSum=-0.554;VQSLOD=2.7297;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:41:99:866,105,0	0/0:10,0:10:24.06:0,24,275	0/0:23,0:23:60.18:0,60,703	0/0:24,0:24:58.53:0,59,643	0/0:43,0:43:99:0,117,1402	0/0:22,0:22:66.19:0,66,782	0/0:29,0:29:81.24:0,81,962	0/0:39,0:39:99:0,105,1224	1/1:2,19:21:48.16:670,48,0	0/0:27,0:27:81.24:0,81,964	0/0:17,0:17:48.13:0,48,555	0/0:21,0:21:60.18:0,60,720	0/0:35,0:35:99:0,102,1166	0/0:16,0:16:48.15:0,48,576	0/0:26,0:26:78.23:0,78,924	0/0:22,0:22:60.14:0,60,702	0/0:34,0:34:93.27:0,93,1104	1/1:1,13:14:36.12:503,36,0	0/0:19,0:19:48.15:0,48,575	0/0:38,0:38:99:0,105,1220	0/0:28,0:28:78.22:0,78,923	0/0:22,0:22:63.19:0,63,755	0/0:19,0:19:51.16:0,51,611	0/0:32,0:32:93.27:0,93,1103	0/0:22,0:22:60.15:0,60,690	0/0:26,0:26:78.22:0,78,916	0/0:26,0:26:72.20:0,72,850	0/0:9,0:9:27.08:0,27,324
chr10	100018726	.	C	CT	2165.24	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.440;DP=699;FS=2.888;HRun=0;HaplotypeScore=68.5474;InbreedingCoeff=0.9983;MQ=84.54;MQ0=0;MQRankSum=-4.269;QD=28.87;ReadPosRankSum=0.032;VQSLOD=3.5509;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,39:40:99:1716,111,0	0/0:8,0:8:24.08:0,24,330	0/0:22,0:22:60.20:0,60,838	0/0:22,0:22:58.59:0,59,802	0/0:41,0:41:99:0,123,1678	0/0:25,0:25:72.18:0,72,966	0/0:27,0:27:81.27:0,81,1131	0/0:36,0:36:99:0,108,1444	1/1:20,0:20:25.61:334,26,0	0/0:29,0:29:84.26:0,84,1153	0/0:17,0:17:48.15:0,48,651	0/0:21,0:21:60.20:0,60,832	0/0:36,0:36:99:0,108,1450	0/0:17,0:17:48.16:0,48,670	0/0:27,0:27:78.26:0,78,1087	0/0:20,0:20:60.16:0,60,813	0/0:34,0:34:99:0,99,1338	1/1:15,0:15:35.45:258,35,0	0/0:18,0:18:54.13:0,54,710	0/0:37,0:37:99:0,111,1471	0/0:27,0:27:78.26:0,78,1086	0/0:23,0:23:66.18:0,66,897	0/0:17,0:17:51.17:0,51,712	0/0:33,0:33:99:0,99,1341	0/0:23,0:23:69.10:0,69,882	0/0:30,0:30:81.25:0,81,1099	0/0:25,0:25:72.24:0,72,1001	0/0:9,0:9:27.09:0,27,377
chr10	100019108	.	A	ATGT	2155.75	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.166;DP=620;FS=2.243;HRun=0;HaplotypeScore=92.1878;InbreedingCoeff=0.9974;MQ=94.95;MQ0=0;MQRankSum=-4.773;QD=56.73;ReadPosRankSum=0.832;VQSLOD=5.8378;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.23:0,66,1099	0/0:7,0:7:21.07:0,21,350	0/0:29,0:29:77.81:0,78,1200	0/0:27,0:28:75.12:0,75,1147	0/0:30,0:30:87.30:0,87,1442	0/0:18,0:18:54.18:0,54,883	0/0:20,0:20:54.15:0,54,848	0/0:25,0:25:72.24:0,72,1176	1/1:0,22:22:60.21:1344,60,0	0/0:27,0:27:81.27:0,81,1328	0/0:18,0:18:45.15:0,45,747	0/0:20,0:20:60.21:0,60,1000	0/0:18,0:18:51.16:0,51,824	0/0:15,0:15:45.14:0,45,717	0/0:26,0:26:75.26:0,75,1250	0/0:18,0:18:51.15:0,51,799	0/0:22,0:22:63.21:0,63,1027	1/1:4,12:16:27.73:933,28,0	0/0:16,0:16:48.16:0,48,770	0/0:27,0:27:78.22:0,78,1266	0/0:23,0:22:66.23:0,66,1099	0/0:29,0:29:84.29:0,84,1377	0/0:20,0:20:51.16:0,51,823	0/0:16,0:16:42.07:0,42,619	0/0:21,0:21:63.19:0,63,1019	0/0:32,0:32:90.31:0,90,1494	0/0:37,0:37:99:0,105,1749	0/0:17,0:17:51.17:0,51,836
chr10	100019295	.	G	GA	446.10	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.511;DP=555;FS=2.027;HRun=6;HaplotypeScore=52.9876;InbreedingCoeff=0.9625;MQ=76.34;MQ0=0;MQRankSum=-1.980;QD=17.84;ReadPosRankSum=-0.200;VQSLOD=3.1625;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39.03:0,39,380	0/0:9,0:9:27.05:0,27,269	0/0:9,0:10:8.97:0,9,156	0/0:12,0:12:17.74:0,18,206	0/0:39,0:39:99:0,108,1099	0/0:18,0:18:54.12:0,54,551	0/0:24,0:24:66.15:0,66,673	0/0:34,0:33:81.16:0,81,817	1/1:4,9:13:21.07:264,21,0	0/0:23,0:23:63.14:0,63,642	0/0:25,0:25:75.17:0,75,765	0/0:19,0:19:45.08:0,45,452	0/0:17,0:17:48.11:0,48,489	0/0:17,0:17:51.09:0,51,511	0/0:18,0:18:42.09:0,42,428	0/0:19,0:19:57.13:0,57,581	0/0:15,0:15:39.06:0,39,389	1/1:2,10:12:24.08:302,24,0	0/0:17,0:17:48.11:0,48,489	0/0:28,0:28:72.16:0,72,735	0/0:15,0:15:45.10:0,45,459	0/0:27,0:27:78.18:0,78,795	0/0:16,0:16:48.11:0,48,490	0/0:24,0:24:72.12:0,72,724	0/0:27,0:27:78.18:0,78,795	0/0:26,0:26:66.14:0,66,673	0/0:24,0:24:57.13:0,57,581	0/0:13,0:13:39.09:0,39,397
chr10	100019703	.	TC	T	1046.54	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.899;DP=691;FS=2.144;HRun=4;HaplotypeScore=77.8414;InbreedingCoeff=0.9992;MQ=81.88;MQ0=0;MQRankSum=-3.173;QD=29.07;ReadPosRankSum=1.037;VQSLOD=3.6771;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1360	0/0:11,0:11:33.11:0,33,451	0/0:23,0:22:60.17:0,60,779	0/0:15,0:15:38.27:0,38,509	0/0:26,0:26:75.24:0,75,1005	0/0:16,0:16:48.15:0,48,640	0/0:24,0:24:72.19:0,72,920	0/0:30,0:30:78.25:0,78,1052	1/1:0,25:25:72.22:861,72,0	0/0:37,0:37:99:0,105,1415	0/0:29,0:29:87.28:0,87,1172	0/0:25,0:25:75.22:0,75,991	0/0:22,0:22:66.22:0,66,901	0/0:25,0:25:75.25:0,75,1024	0/0:25,0:25:72.15:0,72,913	0/0:27,0:27:81.25:0,81,1076	0/0:36,0:36:99:0,108,1406	1/1:0,11:11:27.04:307,27,0	0/0:19,0:19:51.33:0,51,686	0/0:37,0:37:99:0,111,1451	0/0:26,0:26:71.63:0,72,971	0/0:31,0:31:93.25:0,93,1194	0/0:26,0:26:75.24:0,75,1007	0/0:24,0:24:66.16:0,66,864	0/0:27,0:27:78.23:0,78,1020	0/0:25,0:25:75.21:0,75,958	0/0:23,0:23:69.22:0,69,920	0/0:12,0:12:36.12:0,36,491
chr10	100019920	.	CGTGTGTGT	C	5009.51	PASS	AB=0.784;AC=14;AF=0.250;AN=56;BaseQRankSum=10.049;DP=776;FS=5.532;HRun=0;HaplotypeScore=204.6469;InbreedingCoeff=0.8135;MQ=65.04;MQ0=4;MQRankSum=-6.720;QD=26.37;ReadPosRankSum=-1.421;VQSLOD=3.5653;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:44:84.19:0,84,2750	0/0:11,0:12:27.08:0,27,767	0/0:31,0:22:39.07:0,39,690	0/0:54,0:35:53.87:0,54,1046	0/0:21,0:23:48.15:0,48,1569	0/0:23,0:26:60.20:0,60,2139	0/0:25,0:26:72.16:0,72,2379	1/1:15,22:37:65.65:1172,66,0	0/0:17,0:17:21:0,21,242	0/0:26,0:28:69.21:0,69,2315	0/0:16,0:19:44.91:0,45,1187	0/0:28,0:29:69.22:0,69,2675	0/0:27,0:29:78.25:0,78,2821	0/0:26,0:28:72.20:0,72,2447	0/0:54,0:58:99:0,132,4529	0/0:35,0:37:90.30:0,90,3219	0/0:25,0:25:72.20:0,72,2480	0/1:14,0:14:1.41:1,0,194	1/1:13,7:19:17.95:382,18,0	1/1:2,19:22:45.14:851,45,0	1/1:11,20:31:4.22:187,4,0	0/0:16,0:17:42.11:0,42,1303	0/0:22,0:25:51.40:0,51,1723	0/0:30,0:34:78.25:0,78,2714	0/0:19,0:20:48.15:0,48,1708	0/1:14,20:34:99:1347,0,205	1/1:7,13:20:27.01:601,27,0	1/1:4,7:11:21.07:467,21,0
chr10	100019945	.	GTA	G	70.30	PASS	AB=0.909;AC=5;AF=0.089;AN=56;BaseQRankSum=8.415;DP=868;FS=43.433;HRun=0;HaplotypeScore=152.2927;InbreedingCoeff=0.2908;MQ=60.34;MQ0=14;MQRankSum=1.475;QD=0.71;ReadPosRankSum=0.728;VQSLOD=0.8724;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:99:0,114,1602	0/0:12,0:12:25.60:0,26,393	0/1:58,0:26:7.12:7,0,487	0/0:60,0:29:29.99:0,30,552	0/0:21,0:21:18.30:0,18,688	0/0:31,0:31:58.14:0,58,1089	0/0:36,0:36:84.71:0,85,1315	0/0:42,0:42:41.04:0,41,569	1/1:11,3:14:6.91:66,7,0	0/0:35,0:35:90:0,90,1351	0/1:19,0:19:13.92:14,0,393	0/0:31,0:31:82.41:0,82,1329	0/0:30,1:31:21.85:0,22,1208	0/0:29,0:29:59.44:0,59,1177	0/0:49,0:49:48.02:0,48,1853	0/0:44,0:43:64.18:0,64,1612	0/0:29,0:28:61.03:0,61,1205	0/1:5,3:7:8.95:93,0,9	0/0:16,0:15:29.31:0,29,195	0/0:26,0:26:26.12:0,26,150	0/0:47,0:47:51.55:0,52,390	0/0:22,0:22:37.58:0,38,691	0/0:26,0:26:31.84:0,32,811	0/0:44,0:44:48.20:0,48,1369	0/0:24,0:24:33.72:0,34,870	0/0:32,0:32:46.72:0,47,382	0/0:22,0:22:0.10:0,0,93	0/0:11,0:11:19.63:0,20,111
chr10	100019961	.	GCA	G	90.38	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.550;DP=877;FS=2.965;HRun=0;HaplotypeScore=155.1241;InbreedingCoeff=0.8899;MQ=62.41;MQ0=12;MQRankSum=-3.670;QD=7.53;ReadPosRankSum=1.254;VQSLOD=3.6303;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,3:48:99:0,133,2633	0/0:13,0:13:35.85:0,36,731	0/0:68,0:36:99:0,104,1900	0/0:64,0:36:79.13:0,79,1467	0/0:19,0:19:57.20:0,57,1137	0/0:29,0:29:84.29:0,84,1705	0/0:36,0:36:99:0,108,2123	0/0:36,0:36:99:0,105,1919	1/1:1,4:6:2.98:37,3,0	0/0:42,0:42:99:0,126,2473	0/0:14,0:14:39.13:0,39,777	0/0:38,0:38:99:0,108,2153	0/0:30,0:30:72.56:0,73,1708	0/0:26,0:26:78.27:0,78,1567	0/0:46,0:46:99:0,135,2662	0/0:44,0:43:99:0,123,2439	0/0:26,0:25:75.26:0,75,1503	1/1:2,4:6:14.08:157,14,0	0/0:17,0:16:48.16:0,48,949	0/0:23,0:23:54.19:0,54,1075	0/0:56,0:56:99:0,117,2328	0/0:26,0:26:69.24:0,69,1385	0/0:25,0:25:69.24:0,69,1360	0/0:46,0:46:91.89:0,92,2471	0/0:24,0:24:69.24:0,69,1379	0/0:32,0:32:96.33:0,96,1892	0/0:23,0:23:55.07:0,55,1069	0/0:13,0:13:33.11:0,33,657
chr10	100020021	.	GCA	G	82.45	PASS	AB=0.500;AC=3;AF=0.054;AN=56;BaseQRankSum=4.759;DP=1008;FS=0.000;HRun=0;HaplotypeScore=131.0487;InbreedingCoeff=0.8684;MQ=54.47;MQ0=8;MQRankSum=-4.695;QD=4.58;ReadPosRankSum=-0.941;VQSLOD=2.8458;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:42:90.61:0,91,2174	0/0:13,0:13:36.11:0,36,730	0/0:49,1:18:24.26:0,24,876	0/0:59,0:22:59.48:0,59,1026	0/0:24,0:24:66.23:0,66,1302	0/0:30,0:30:84.06:0,84,1628	0/0:33,0:33:99:0,99,1919	0/0:57,0:57:99:0,169,3176	0/1:0,10:10:0:0,0,0	0/0:48,0:48:99:0,144,2869	0/0:17,0:17:51.17:0,51,1009	0/0:39,0:38:99:0,105,2088	0/0:37,0:37:99:0,111,2162	0/0:32,0:32:96.33:0,96,1922	0/0:43,0:43:99:0,120,2389	0/0:48,0:48:99:0,138,2683	0/0:23,0:23:60.68:0,61,1181	1/1:1,7:7:15.03:171,15,0	0/0:36,0:34:96.32:0,96,1801	0/0:29,0:29:81.28:0,81,1611	0/0:117,0:117:99:0,293,5749	0/0:33,0:33:93.32:0,93,1863	0/0:27,0:27:81.26:0,81,1595	0/0:41,0:41:99:0,117,2307	0/0:27,0:27:78.27:0,78,1551	0/0:42,0:42:99:0,125,2498	0/0:30,0:30:84.29:0,84,1654	0/0:12,0:12:36.12:0,36,706
chr10	100020352	.	C	CG	337.78	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.402;DP=396;FS=0.821;HRun=0;HaplotypeScore=80.1609;InbreedingCoeff=0.8413;MQ=89.93;MQ0=5;MQRankSum=-3.055;QD=17.78;ReadPosRankSum=1.861;VQSLOD=5.9619;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:1.47:0,1,17	0/0:6,0:6:17.88:0,18,187	0/0:41,0:31:53.38:0,53,476	0/0:34,0:23:29.59:0,30,309	0/0:18,0:18:41.58:0,42,334	0/0:15,0:15:38.74:0,39,320	0/0:15,0:15:42.05:0,42,482	0/0:17,0:17:49.99:0,50,340	1/1:4,0:4:11.34:80,11,0	0/0:7,0:7:20.56:0,21,166	0/0:4,0:4:12.01:0,12,121	0/0:8,0:8:24:0,24,248	0/0:13,0:13:38.93:0,39,396	0/0:12,0:12:27.39:0,27,242	0/0:11,0:11:28.57:0,29,257	0/0:8,0:8:24.04:0,24,262	0/0:12,0:12:30.51:0,31,335	1/1:9,6:15:40.05:373,40,0	0/0:14,0:14:40.76:0,41,246	0/0:24,0:24:55.14:0,55,298	0/0:9,0:9:17.62:0,18,106	0/0:9,0:9:18.87:0,19,169	0/0:13,0:13:26.49:0,26,202	0/0:6,0:6:16.53:0,17,155	0/0:6,0:6:15.02:0,15,162	0/0:26,0:26:73.07:0,73,457	0/0:31,0:30:64.01:0,64,366	0/0:13,0:13:28.49:0,28,176
chr10	100020356	.	C	CCT	5473.04	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=-11.267;DP=397;FS=2.556;HRun=0;HaplotypeScore=68.9108;InbreedingCoeff=0.8126;MQ=87.47;MQ0=5;MQRankSum=-0.797;QD=36.01;ReadPosRankSum=7.442;VQSLOD=6.2554;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:5.96:0,6,42	0/0:7,0:7:21.03:0,21,247	0/0:38,0:28:31.74:0,32,394	0/0:32,0:22:7.57:0,8,190	0/0:20,0:20:42.01:0,42,426	0/0:15,0:15:29.97:0,30,274	0/0:15,0:15:42.08:0,42,515	1/1:0,15:15:45.08:634,45,0	0/1:5,0:5:0.63:1,0,53	0/0:9,0:9:12.01:0,12,114	0/0:7,0:7:11.97:0,12,116	0/0:7,0:7:18.04:0,18,215	0/0:11,0:11:33.04:0,33,385	0/0:12,0:12:29.92:0,30,252	0/0:9,0:9:24.02:0,24,237	0/0:9,0:9:24.04:0,24,283	0/0:12,0:12:32.98:0,33,388	0/1:15,0:15:43.38:43,0,61	1/1:0,13:14:42.12:627,42,0	1/1:1,24:26:66.08:991,66,0	1/1:1,9:10:18.04:299,18,0	0/0:10,0:10:26.99:0,27,271	0/0:12,0:12:18.01:0,18,176	0/0:5,0:5:13.27:0,13,145	0/0:8,0:8:15.03:0,15,187	1/1:1,22:23:66.23:1094,66,0	1/1:2,29:30:78.27:1287,78,0	1/1:0,13:13:30.10:496,30,0
chr10	100020391	.	AT	A	592.19	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.838;DP=365;FS=0.000;HRun=5;HaplotypeScore=48.3684;InbreedingCoeff=0.9215;MQ=76.23;MQ0=0;MQRankSum=-2.611;QD=25.75;ReadPosRankSum=0.527;VQSLOD=2.4785;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:24.01:0,24,305	0/0:3,0:3:6.02:0,6,82	0/0:10,0:10:15.04:0,15,185	0/0:7,0:7:14.96:0,15,177	0/0:23,0:23:69.22:0,69,927	0/0:8,0:8:24.04:0,24,307	0/0:9,0:9:27.03:0,27,315	0/0:21,0:21:51.16:0,51,684	1/1:0,9:9:24.07:271,24,0	0/0:10,0:10:30.09:0,30,398	0/0:22,0:22:66.21:0,66,885	0/0:11,0:11:33.11:0,33,451	0/0:13,0:13:39.13:0,39,532	0/0:9,0:9:21.07:0,21,287	0/0:10,0:10:24.08:0,24,328	0/0:10,0:10:30.10:0,30,409	0/0:11,0:11:33.11:0,33,450	1/1:1,13:14:39.11:442,39,0	0/0:16,0:16:42.12:0,42,551	0/0:23,0:23:63.21:0,63,861	0/0:10,0:10:27.09:0,27,369	0/0:16,0:16:42.14:0,42,575	0/0:13,0:13:33.11:0,33,451	0/0:9,0:9:24.08:0,24,328	0/0:14,0:14:39.12:0,39,517	0/0:22,0:22:57.19:0,57,780	0/0:23,0:23:60.14:0,60,783	0/0:8,0:8:18.06:0,18,246
chr10	100020902	.	C	CT	2345	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.810;DP=647;FS=2.070;HRun=7;HaplotypeScore=65.9044;InbreedingCoeff=0.9782;MQ=76.96;MQ0=0;MQRankSum=0.275;QD=29.68;ReadPosRankSum=2.127;VQSLOD=4.2755;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:34:84.26:1015,84,0	0/0:8,0:8:21.03:0,21,203	0/0:12,0:12:12.53:0,13,140	0/0:16,0:16:12.14:0,12,210	0/0:27,1:28:41.88:0,42,688	0/0:29,0:29:81.12:0,81,782	0/0:27,0:27:78.12:0,78,753	0/0:22,0:22:54.08:0,54,520	1/1:4,17:21:54.16:639,54,0	0/0:34,0:34:86.91:0,87,834	0/0:19,0:19:51.08:0,51,492	0/0:22,0:22:63.10:0,63,608	0/0:24,0:24:63.09:0,63,608	0/0:28,0:28:75.10:0,75,724	0/0:25,0:25:61.16:0,61,629	0/0:19,0:19:51.06:0,51,487	0/0:23,0:23:66.08:0,66,629	1/1:0,24:24:69.21:834,69,0	0/0:21,0:21:54.08:0,54,521	0/0:27,0:27:69.10:0,69,666	0/0:23,0:23:33.54:0,34,523	0/0:31,0:31:84.11:0,84,804	0/0:24,0:24:66.07:0,66,627	0/0:23,0:23:66.11:0,66,637	0/0:22,0:22:57.07:0,57,549	0/0:27,0:27:75.12:0,75,724	0/0:21,0:21:54.08:0,54,521	0/0:13,0:13:39.06:0,39,376
chr10	100021867	.	AT	A	192.62	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=5.286;DP=517;FS=0.000;HRun=11;HaplotypeScore=80.5902;InbreedingCoeff=0.5921;MQ=71.19;MQ0=1;MQRankSum=0.426;QD=4.38;ReadPosRankSum=-0.196;VQSLOD=1.0693;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:60.14:287,60,0	0/0:10,0:10:18.03:0,18,184	0/0:33,0:15:5.85:0,6,214	0/1:13,0:11:1.05:1,0,58	0/0:25,0:26:78.01:0,78,799	0/0:19,1:20:32.47:0,32,536	0/0:16,0:16:45.10:0,45,472	0/0:24,0:24:45.91:0,46,250	0/0:20,1:21:23.97:0,24,154	0/0:23,0:22:54.59:0,55,564	0/0:21,1:23:15.35:0,15,502	0/0:17,1:18:20.39:0,20,407	0/0:10,1:11:2.44:0,2,225	0/0:17,0:17:42.03:0,42,418	0/0:26,0:26:72.14:0,72,750	0/0:16,0:16:45.08:0,45,463	0/0:19,0:19:54.08:0,54,550	0/0:18,0:18:16.30:0,16,109	0/0:21,0:22:31.40:0,31,160	0/0:16,0:16:42.98:0,43,226	0/0:11,0:11:17.17:0,17,90	0/0:9,0:9:27.02:0,27,265	0/0:21,0:21:54.14:0,54,575	0/0:14,0:14:33.02:0,33,332	0/0:21,0:21:51.12:0,51,538	0/0:16,0:16:37.67:0,38,221	0/0:12,0:12:19.89:0,20,98	0/0:10,0:10:22.73:0,23,113
chr10	100021877	.	T	TA	883.48	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=9.240;DP=516;FS=0.545;HRun=0;HaplotypeScore=82.6724;InbreedingCoeff=0.2536;MQ=72.02;MQ0=0;MQRankSum=-1.628;QD=7.36;ReadPosRankSum=-1.680;VQSLOD=3.1736;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:70.97:784,71,0	0/0:8,0:8:24.07:0,24,305	0/0:38,0:19:29.76:0,30,411	0/1:13,0:10:14.85:15,0,71	0/0:33,0:33:91.03:0,91,1186	0/0:20,0:20:60.07:0,60,765	0/0:15,0:15:45.15:0,45,623	0/1:23,0:23:13.10:132,0,13	0/0:22,0:22:63.83:0,64,355	0/0:23,0:22:66.16:0,66,853	0/0:22,0:22:55.75:0,56,754	0/0:17,0:17:48.04:0,48,620	0/0:12,0:12:32.99:0,33,402	0/0:15,0:15:45.12:0,45,583	0/0:25,0:25:72.24:0,72,991	0/0:17,0:17:48.13:0,48,624	0/0:20,0:20:60.13:0,60,778	0/0:22,0:21:12.93:0,13,133	0/1:13,0:13:24.51:25,0,25	0/1:15,0:15:3.38:3,0,18	0/0:10,0:10:3.97:0,4,16	0/0:11,0:11:30.09:0,30,392	0/0:22,0:22:63.16:0,63,822	0/0:12,0:12:36.11:0,36,483	0/0:19,0:19:56.91:0,57,734	0/1:17,0:17:15.86:53,0,16	0/0:13,0:13:1.70:0,2,12	1/1:11,0:11:1.86:7,2,0
chr10	100021878	.	T	TTAA	5898.27	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=0.951;DP=516;FS=2.699;HRun=0;HaplotypeScore=85.9951;InbreedingCoeff=0.8392;MQ=70.50;MQ0=0;MQRankSum=-0.963;QD=34.90;ReadPosRankSum=-1.064;VQSLOD=4.8993;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:28:63.25:734,63,0	0/0:8,0:8:24.05:0,24,328	0/0:35,0:18:43.62:0,44,419	0/1:11,0:9:10.96:11,0,65	0/0:33,0:33:94.57:0,95,1332	0/0:19,0:19:57.15:0,57,846	0/0:15,0:15:45.10:0,45,661	1/1:0,19:22:66.18:1150,66,0	0/0:22,0:22:49.65:0,50,389	0/0:23,0:22:66.07:0,66,882	0/0:22,0:22:61.05:0,61,837	0/0:17,0:17:48.08:0,48,676	0/0:12,0:12:36.05:0,36,469	0/0:15,0:15:42:0,42,595	0/0:25,0:25:74.54:0,75,1073	0/0:16,0:16:48.11:0,48,694	0/0:20,0:20:60.04:0,60,814	0/1:22,0:21:95.54:147,0,96	1/1:2,13:15:42.08:803,42,0	1/1:0,15:17:51.04:927,51,0	1/1:0,9:11:18.05:357,18,0	0/0:11,0:11:33.01:0,33,410	0/0:22,0:22:63.18:0,63,930	0/0:12,0:12:36.09:0,36,531	0/0:19,0:19:57.14:0,57,848	1/1:0,16:18:50.94:810,51,0	1/1:0,12:13:21.06:426,21,0	1/1:0,10:11:24.08:531,24,0
chr10	100022261	.	AC	A	1540.29	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.284;DP=662;FS=4.677;HRun=2;HaplotypeScore=64.9103;InbreedingCoeff=0.9903;MQ=84.76;MQ0=0;MQRankSum=-4.274;QD=33.48;ReadPosRankSum=1.329;VQSLOD=3.8966;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,46:46:99:1635,126,0	0/0:6,0:6:18.06:0,18,268	0/0:21,0:21:60.04:0,60,841	0/0:21,0:21:57.14:0,57,826	0/0:27,0:27:72.22:0,72,1032	0/0:15,0:15:45.14:0,45,654	0/0:24,0:24:69.23:0,69,1033	0/0:23,0:23:66.22:0,66,972	0/0:24,0:24:72.24:0,72,1079	0/0:29,0:29:87.28:0,87,1268	0/0:19,0:19:57.19:0,57,850	0/0:30,0:30:90.30:0,90,1329	0/0:19,0:19:54.10:0,54,781	0/0:27,0:27:81.26:0,81,1193	0/0:31,0:31:93.29:0,93,1351	0/0:24,0:24:69.22:0,69,1010	0/0:30,0:30:81.27:0,81,1212	0/0:18,0:18:51.16:0,51,744	0/0:20,0:20:60.19:0,60,874	0/0:20,0:20:60.18:0,60,857	0/0:41,0:41:99:0,120,1689	0/0:17,0:17:51.16:0,51,741	0/0:19,0:19:57.18:0,57,827	0/0:31,0:31:93.20:0,93,1302	0/0:26,0:26:78.25:0,78,1149	0/0:17,0:17:51.17:0,51,761	0/0:26,0:26:78.26:0,78,1168	0/0:11,0:11:24.55:0,25,360
chr10	100022331	.	A	AT	1259.98	PASS	AB=0.889;AC=6;AF=0.107;AN=56;BaseQRankSum=2.761;DP=671;FS=1.471;HRun=11;HaplotypeScore=80.1572;InbreedingCoeff=0.5690;MQ=71.10;MQ0=1;MQRankSum=-2.161;QD=11.15;ReadPosRankSum=-1.184;VQSLOD=3.1210;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,3:49:95.46:630,95,0	0/1:8,2:10:36.97:37,0,115	0/0:19,0:19:6.88:0,7,129	0/0:20,0:17:29.92:0,30,207	0/0:27,0:27:68.69:0,69,531	0/0:11,0:11:26.89:0,27,209	0/0:18,3:21:20.35:0,20,339	0/0:44,0:44:99:0,102,783	0/0:3,0:19:35.57:0,36,117	0/0:32,2:34:13.84:0,14,473	0/1:16,1:17:15.18:15,0,196	0/0:21,0:21:56.76:0,57,441	0/0:26,1:27:35.26:0,35,457	0/0:22,0:22:53.77:0,54,416	0/0:27,0:29:40.23:0,40,458	0/0:26,0:26:65.72:0,66,510	1/1:8,28:37:50.80:713,51,0	0/0:2,0:14:24.22:0,24,70	0/0:23,0:22:44.66:0,45,347	0/0:26,0:26:50.70:0,51,392	0/0:19,0:20:46.55:0,47,351	0/0:22,0:22:56.78:0,57,441	0/0:26,0:27:51.53:0,52,433	0/0:35,0:35:95.61:0,96,743	0/0:11,0:12:19.93:0,20,145	0/0:23,0:23:50.77:0,51,395	0/0:18,2:21:4.61:0,5,282	0/0:12,0:12:32.87:0,33,255
chr10	100022825	.	G	GAC	5570.21	PASS	AB=0.619;AC=19;AF=0.339;AN=56;BaseQRankSum=-7.733;DP=607;FS=0.785;HRun=0;HaplotypeScore=88.4169;InbreedingCoeff=0.8960;MQ=71.01;MQ0=2;MQRankSum=-0.924;QD=26.91;ReadPosRankSum=-1.595;VQSLOD=5.1051;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:15:11.94:98,12,0	0/0:7,0:7:21.06:0,21,250	0/0:43,0:34:32.33:0,32,489	0/0:33,0:24:38.73:0,39,369	0/0:23,0:23:54.05:0,54,624	0/0:26,0:26:60.03:0,60,704	0/0:15,0:16:38.95:0,39,450	1/1:6,22:28:29.72:880,30,0	1/1:11,17:27:12.03:689,12,0	0/0:21,0:21:48.99:0,49,592	0/0:18,0:20:44.96:0,45,509	0/0:18,0:18:51.16:0,51,615	0/0:20,0:20:36.18:0,36,555	0/0:21,0:21:56.88:0,57,680	0/0:23,0:22:60.18:0,60,726	0/0:25,1:26:26.81:0,27,803	0/0:18,0:18:45.10:0,45,529	1/1:8,9:17:8.73:606,9,0	1/1:8,3:11:18.04:264,18,0	1/1:6,25:31:68.88:922,69,0	1/1:0,6:6:15.05:242,15,0	0/0:18,0:18:41.99:0,42,494	0/0:16,0:17:33.10:0,33,400	0/0:21,0:21:51.16:0,51,618	0/0:25,0:25:72.22:0,72,873	0/1:10,15:25:69.10:649,0,69	1/1:5,20:26:48.16:751,48,0	1/1:10,8:18:30.10:470,30,0
chr10	100022857	.	CAGAG	C	1138.87	PASS	AB=0.942;AC=20;AF=0.400;AN=50;BaseQRankSum=3.926;DP=614;FS=6.028;HRun=0;HaplotypeScore=130.6513;InbreedingCoeff=0.2247;MQ=61.47;MQ0=13;MQRankSum=-3.454;QD=3.93;ReadPosRankSum=1.147;VQSLOD=2.2140;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:11:11.93:0,12,108	0/0:9,0:10:8.69:0,9,55	./.	./.	0/0:23,0:23:8.79:0,9,79	0/0:21,0:21:8.91:0,9,165	0/0:15,0:15:9.01:0,9,148	1/1:27,0:27:2.71:13,3,0	0/1:17,0:18:10.02:56,0,10	0/1:21,0:20:6.19:6,0,281	0/0:19,0:20:29.66:0,30,399	0/1:20,1:21:25.24:25,0,207	0/1:19,2:21:69.76:70,0,191	0/1:23,2:25:28.19:28,0,308	0/0:29,0:28:41.13:0,41,783	0/0:27,0:29:35.58:0,36,625	0/0:17,0:17:20.96:0,21,317	./.	0/1:9,1:8:3.93:41,0,4	1/1:19,0:21:11.04:100,11,0	1/1:7,1:8:3.01:46,3,0	0/1:21,0:21:8.84:9,0,243	0/0:17,0:17:5.92:0,6,94	0/1:29,1:29:44.36:44,0,652	0/0:27,0:27:0.38:0,0,280	1/1:23,2:27:11.69:244,12,0	1/1:18,5:22:29.46:410,29,0	1/1:11,3:14:15.04:211,15,0
chr10	100023007	.	GA	G	703.70	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.746;DP=561;FS=0.712;HRun=7;HaplotypeScore=56.3094;InbreedingCoeff=0.9960;MQ=79.79;MQ0=0;MQRankSum=-1.738;QD=21.99;ReadPosRankSum=0.971;VQSLOD=3.3475;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:45.13:0,45,553	0/0:7,0:7:21.07:0,21,264	0/0:22,0:22:53.56:0,54,637	0/0:16,0:15:27.59:0,28,362	0/0:19,0:19:54.17:0,54,679	0/0:20,0:20:57.18:0,57,717	0/0:21,0:21:51.16:0,51,642	0/0:32,0:32:81.25:0,81,1008	1/1:0,16:15:42.10:428,42,0	0/0:31,0:31:84.27:0,84,1048	0/0:21,0:21:60.18:0,60,742	0/0:12,0:12:36.11:0,36,441	0/0:20,0:20:60.16:0,60,725	0/0:21,0:21:63.15:0,63,759	0/0:23,0:23:69.21:0,69,855	0/0:21,1:22:35.61:0,36,762	0/0:13,0:13:39.12:0,39,491	1/1:3,13:16:39.09:397,39,0	0/0:8,0:8:24.08:0,24,302	0/0:35,0:35:99:0,102,1283	0/0:19,0:19:54.15:0,54,653	0/0:12,0:12:36.10:0,36,439	0/0:18,0:18:51.16:0,51,641	0/0:12,0:12:33.10:0,33,401	0/0:24,0:24:69.21:0,69,852	0/0:29,0:29:75.24:0,75,943	0/0:33,0:33:96.31:0,96,1207	0/0:21,0:21:60.19:0,60,755
chr10	100025281	.	CT	C	553.75	PASS	AB=0.857;AC=7;AF=0.125;AN=56;BaseQRankSum=3.723;DP=565;FS=29.254;HRun=12;HaplotypeScore=72.1036;InbreedingCoeff=0.7863;MQ=71.11;MQ0=3;MQRankSum=0.142;QD=7.01;ReadPosRankSum=0.364;VQSLOD=0.2306;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,1:24:38.51:136,39,0	0/0:6,0:6:15:0,15,143	0/0:10,1:8:11.41:0,11,82	0/0:17,0:12:6.05:0,6,85	0/0:25,5:30:5.41:0,5,577	0/0:17,0:17:22.19:0,22,403	0/0:11,0:11:18.04:0,18,183	0/0:10,0:30:51.32:0,51,296	1/1:2,9:11:20.91:163,21,0	0/0:34,1:35:63.92:0,64,821	0/0:27,0:27:69.14:0,69,700	0/0:20,0:20:45.07:0,45,445	0/0:16,0:16:25.55:0,26,400	0/0:20,0:20:48.09:0,48,482	0/0:22,0:22:60.11:0,60,605	0/0:16,0:16:48.09:0,48,481	0/0:22,0:22:33.47:0,33,452	1/1:2,22:24:50.79:395,51,0	0/0:7,0:31:65.68:0,66,331	0/0:4,0:19:35.63:0,36,193	0/0:0,0:7:5.68:0,6,29	0/0:15,0:15:41.45:0,41,404	0/0:29,1:30:48.86:0,49,656	0/0:14,0:14:33.07:0,33,335	0/1:14,3:18:1.66:2,0,313	0/0:7,0:21:35.66:0,36,198	0/0:4,0:30:50.88:0,51,274	0/0:5,0:17:25.18:0,25,128
chr10	100025485	.	C	CTA	142.84	PASS	AB=0.871;AC=6;AF=0.107;AN=56;BaseQRankSum=7.548;DP=553;FS=34.352;HRun=0;HaplotypeScore=92.1338;InbreedingCoeff=-0.1134;MQ=64.55;MQ0=0;MQRankSum=-7.527;QD=1.21;ReadPosRankSum=2.056;VQSLOD=-0.5011;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,2:34:96.31:0,96,1524	0/0:5,0:5:15.04:0,15,222	0/0:23,0:19:50.91:0,51,804	0/0:24,0:23:63.17:0,63,944	0/0:15,0:16:45.13:0,45,685	0/1:15,2:17:25.90:26,0,681	0/0:24,1:25:31.69:0,32,1083	0/0:24,0:24:72.25:0,72,1172	0/1:14,7:21:99:144,0,622	0/0:14,0:14:42.14:0,42,684	0/0:9,0:9:27.09:0,27,441	0/0:14,1:15:42.14:0,42,685	0/0:18,3:21:14.87:0,15,789	0/1:23,5:28:39.80:40,0,1048	0/1:22,2:24:4.30:4,0,912	0/0:13,1:14:7.22:0,7,602	0/0:36,0:36:99:0,102,1615	0/0:28,0:28:81.19:0,81,1232	0/1:15,2:16:39.08:39,0,605	0/0:13,0:13:39.12:0,39,612	0/0:29,2:30:49.14:0,49,1351	0/1:10,0:11:4.70:5,0,410	0/0:16,0:16:45.12:0,45,703	0/0:22,2:24:66.23:0,66,1077	0/0:12,0:11:36.12:0,36,588	0/0:21,1:21:63.22:0,63,1027	0/0:20,1:21:46.50:0,46,937	0/0:8,0:8:24.08:0,24,392
chr10	100026007	.	C	CTT	4253.09	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-11.140;DP=502;FS=9.777;HRun=8;HaplotypeScore=58.2716;InbreedingCoeff=0.9555;MQ=77.25;MQ0=0;MQRankSum=0.590;QD=33.49;ReadPosRankSum=-2.463;VQSLOD=3.4872;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:0,0:22:39.74:0,40,194	0/0:4,0:4:9.01:0,9,100	0/0:9,0:9:4.76:0,5,76	0/0:14,0:13:17.21:0,17,136	0/0:36,0:37:99:0,105,1149	0/0:17,0:17:48.11:0,48,524	0/0:6,0:6:18.05:0,18,201	1/1:4,17:21:51.15:762,51,0	0/0:15,0:15:42.11:0,42,468	0/0:29,0:29:81.21:0,81,897	0/0:26,0:26:72.16:0,72,783	0/0:18,0:18:51.08:0,51,539	0/0:10,0:10:27.04:0,27,289	0/0:16,0:16:45.12:0,45,501	0/0:22,0:21:66.16:0,66,726	0/0:19,0:19:42.09:0,42,468	0/0:14,0:14:42.11:0,42,467	0/0:24,0:24:66.17:0,66,736	1/1:5,10:17:33.10:500,33,0	1/1:2,19:23:59.17:874,59,0	1/1:1,7:8:18.06:286,18,0	0/0:16,0:16:33.07:0,33,367	0/0:24,0:24:63.13:0,63,693	0/0:11,0:11:33.09:0,33,368	0/0:22,0:22:63.17:0,63,702	1/1:3,23:26:66.08:990,66,0	1/1:3,22:26:44.56:651,45,0	1/1:0,5:6:12.04:190,12,0
chr10	100026124	.	A	AT	1569.82	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-0.983;DP=507;FS=1.820;HRun=8;HaplotypeScore=67.3298;InbreedingCoeff=0.9906;MQ=72.75;MQ0=0;MQRankSum=-2.433;QD=25.32;ReadPosRankSum=1.077;VQSLOD=4.5241;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,20:32:75.16:823,75,0	0/0:5,0:5:15.01:0,15,137	0/0:11,0:11:23.17:0,23,185	0/0:13,0:13:29.78:0,30,248	0/0:27,0:27:75:0,75,677	0/0:16,0:16:41.99:0,42,375	0/0:17,0:18:50:0,50,433	0/0:14,0:14:36.01:0,36,329	1/1:1,12:13:36.11:415,36,0	0/0:26,0:26:63.02:0,63,577	0/0:15,0:15:38.97:0,39,349	0/0:17,0:17:38.99:0,39,352	0/0:12,0:12:29.99:0,30,266	0/0:20,0:20:54.02:0,54,494	0/0:20,0:20:40.29:0,40,470	0/0:22,0:22:60.03:0,60,548	0/0:21,0:21:53.99:0,54,488	1/1:6,11:17:42.11:474,42,0	0/0:21,0:21:48:0,48,432	0/0:29,0:29:77.90:0,78,689	0/0:8,0:8:21:0,21,189	0/0:18,0:18:51.03:0,51,467	0/0:27,0:27:69.02:0,69,626	0/0:12,0:12:36.01:0,36,325	0/0:20,0:20:51.03:0,51,467	0/0:18,0:18:45.01:0,45,412	0/0:27,0:27:60.01:0,60,546	0/0:8,0:8:24.01:0,24,220
chr10	100026179	.	CT	C	441.63	PASS	AB=0.909;AC=5;AF=0.089;AN=56;BaseQRankSum=1.440;DP=559;FS=4.384;HRun=12;HaplotypeScore=82.0621;InbreedingCoeff=0.8220;MQ=67.64;MQ0=1;MQRankSum=-1.477;QD=10.51;ReadPosRankSum=0.462;VQSLOD=3.3171;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,2:35:13.37:0,13,317	0/1:9,1:9:2.20:2,0,162	0/0:9,0:7:11.95:0,12,96	0/0:21,1:19:16.02:0,16,258	0/0:26,0:29:56.61:0,57,525	0/0:23,0:25:53.94:0,54,532	0/0:19,0:19:42.07:0,42,419	0/0:29,0:29:66.59:0,67,411	1/1:2,10:12:26.87:206,27,0	0/0:31,0:31:81.11:0,81,799	0/0:16,0:16:42.07:0,42,421	0/0:18,0:18:51.10:0,51,518	0/0:11,0:12:35.88:0,36,339	0/0:18,0:18:41.92:0,42,410	0/0:23,0:23:62.16:0,62,615	0/0:17,1:18:18.81:0,19,362	0/0:28,0:28:81.16:0,81,822	1/1:3,16:20:31.71:356,32,0	0/0:23,0:23:51.94:0,52,289	0/0:19,0:19:37.60:0,38,224	0/0:10,0:10:23.12:0,23,130	0/0:10,0:10:27.05:0,27,273	0/0:27,1:27:54.56:0,55,716	0/0:14,0:14:35.99:0,36,352	0/0:17,0:18:46.73:0,47,440	0/0:29,0:29:80.69:0,81,459	0/0:21,0:23:45.86:0,46,237	0/0:11,0:11:28.75:0,29,150
chr10	100026191	.	T	TA	4415.53	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-6.696;DP=563;FS=20.156;HRun=2;HaplotypeScore=65.2735;InbreedingCoeff=0.9883;MQ=68.81;MQ0=1;MQRankSum=-0.247;QD=24.26;ReadPosRankSum=-0.577;VQSLOD=3.1972;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:39.32:284,39,0	0/0:10,0:9:26.99:0,27,289	0/0:12,0:10:9.01:0,9,89	0/0:20,0:17:26.62:0,27,220	0/0:21,0:21:28.37:0,28,550	0/0:21,0:21:55.84:0,56,678	0/0:14,0:14:42:0,42,479	1/1:2,24:27:67.09:792,67,0	0/0:15,0:15:35.48:0,35,240	0/0:29,0:29:78.21:0,78,916	0/0:18,0:18:54.06:0,54,600	0/0:20,0:20:60.15:0,60,704	0/0:18,0:18:45.42:0,45,507	0/0:14,0:14:39.12:0,39,481	0/0:25,0:25:75.15:0,75,851	0/0:18,0:18:48.04:0,48,536	0/0:30,0:30:90.18:0,90,1045	0/0:22,0:22:46.73:0,47,341	1/1:3,18:21:54.17:682,54,0	1/1:2,18:20:22.17:441,22,0	1/1:1,11:12:21.07:271,21,0	0/0:11,0:11:30.04:0,30,339	0/0:29,0:28:80.91:0,81,880	0/0:14,0:14:42.04:0,42,482	0/0:20,0:20:49.13:0,49,573	1/1:2,29:31:55.12:1010,55,0	1/1:3,19:24:47.84:549,48,0	1/1:0,11:11:30.10:387,30,0
chr10	100027961	.	CTT	C	405.42	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.422;DP=655;FS=7.158;HRun=3;HaplotypeScore=107.6547;InbreedingCoeff=0.9806;MQ=60.23;MQ0=5;MQRankSum=-5.000;QD=20.27;ReadPosRankSum=0.347;VQSLOD=0.9900;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,14:20:33.37:500,33,0	0/0:10,0:10:30.09:0,30,547	0/0:15,0:10:26.46:0,26,380	0/0:15,0:10:14.56:0,15,206	0/0:25,0:25:72.21:0,72,1266	0/0:28,0:28:81.26:0,81,1480	0/0:24,0:24:69.18:0,69,1144	0/0:38,0:37:99:0,111,1772	0/0:23,0:23:69.21:0,69,1224	0/0:33,0:33:93.26:0,93,1614	0/0:20,0:20:60.19:0,60,1078	0/0:19,0:19:54.17:0,54,997	0/0:30,0:30:90.24:0,90,1513	0/0:32,0:32:93.29:0,93,1693	0/0:25,0:25:72.21:0,72,1235	0/0:15,0:15:45.13:0,45,770	0/0:22,0:22:66.18:0,66,1141	0/0:21,0:21:63.06:0,63,941	0/0:23,0:21:47.34:0,47,766	0/0:25,0:25:75.24:0,75,1365	0/0:12,0:12:33.11:0,33,636	0/0:22,0:22:66.18:0,66,1128	0/0:21,0:21:51.61:0,52,1044	0/0:31,0:31:84.21:0,84,1449	0/0:28,0:28:81.24:0,81,1411	0/0:33,0:33:99:0,99,1723	0/0:13,0:13:39.10:0,39,675	0/0:32,0:32:95.58:0,96,1561
chr10	100027998	.	CTTCT	C	913.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.945;DP=664;FS=3.748;HRun=0;HaplotypeScore=134.7930;InbreedingCoeff=0.8000;MQ=57.58;MQ0=11;MQRankSum=-1.554;QD=32.63;ReadPosRankSum=-3.947;VQSLOD=2.8450;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:18,10:28:69.09:1008,69,0	0/0:15,0:15:39.13:0,39,904	0/0:14,0:6:13.71:0,14,124	0/0:15,0:4:2.66:0,3,98	0/0:26,0:26:69.22:0,69,1628	0/0:25,0:25:57.19:0,57,1270	0/0:16,0:16:36.12:0,36,771	0/0:28,0:27:54.18:0,54,995	0/0:25,0:25:57.17:0,57,926	0/0:37,0:37:90.31:0,90,2061	0/0:23,0:23:60.21:0,60,1372	0/0:25,0:25:42.23:0,42,1209	0/0:24,0:24:51.15:0,51,1064	0/0:32,0:32:78.27:0,78,1708	0/0:32,0:32:84.29:0,84,1917	0/0:15,0:14:39.13:0,39,883	0/0:23,0:23:60.20:0,60,1292	0/0:21,0:21:10.81:0,11,450	0/0:18,0:13:33.10:0,33,669	0/0:28,0:28:72.22:0,72,1517	0/0:12,0:12:33.11:0,33,656	0/0:23,0:23:54.17:0,54,1151	0/0:27,0:27:75.24:0,75,1697	0/0:28,0:28:75.26:0,75,1714	0/0:25,0:25:60.19:0,60,1350	0/0:37,0:37:99:0,99,2247	0/0:13,0:13:27.09:0,27,591	0/0:29,0:28:63.21:0,63,1410
chr10	100028336	.	A	AT	3422.90	PASS	AB=0.739;AC=13;AF=0.232;AN=56;BaseQRankSum=-12.544;DP=560;FS=13.610;HRun=10;HaplotypeScore=56.7131;InbreedingCoeff=0.7091;MQ=70.62;MQ0=0;MQRankSum=1.495;QD=19.45;ReadPosRankSum=-5.414;VQSLOD=1.3185;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:30:48.88:0,49,141	0/0:7,0:7:17.98:0,18,148	0/0:7,0:6:5.21:0,5,30	0/1:12,0:12:1.15:1,0,101	0/0:29,0:30:73.94:0,74,597	0/0:14,0:14:35.94:0,36,296	0/0:20,0:20:53.91:0,54,440	1/1:10,20:30:40.98:609,41,0	0/0:0,0:9:18.33:0,18,53	0/0:29,0:29:80.90:0,81,664	0/0:26,0:26:68.85:0,69,559	0/0:18,0:18:41.93:0,42,345	0/0:17,0:17:47.94:0,48,394	0/0:10,0:10:26.97:0,27,222	0/0:25,0:25:65.91:0,66,542	0/0:24,0:24:34.88:0,35,440	0/0:18,1:19:21.90:0,22,378	0/0:0,0:7:14.26:0,14,41	1/1:6,17:23:29.47:511,29,0	1/1:4,25:29:44.49:666,44,0	0/1:6,8:14:28.24:139,0,28	0/0:25,0:25:68.91:0,69,566	0/0:24,0:26:69.97:0,70,551	0/0:15,0:15:44.92:0,45,365	0/0:26,0:26:68.90:0,69,566	1/1:4,21:25:19.86:608,20,0	1/1:4,21:25:35.51:583,36,0	0/1:5,13:18:53.45:307,0,53
chr10	100028535	.	A	ATATTTGCAG	3349.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.580;DP=737;FS=0.000;HRun=0;HaplotypeScore=194.7660;InbreedingCoeff=0.9989;MQ=92.85;MQ0=0;MQRankSum=-8.295;QD=115.50;ReadPosRankSum=-0.103;VQSLOD=3.8043;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,20:29:72.25:3350,72,0	0/0:9,0:9:27.04:0,27,726	0/0:35,0:35:99:0,102,2718	0/0:28,0:28:80.98:0,81,2290	0/0:22,0:22:63.20:0,63,1920	0/0:21,0:21:63.19:0,63,1905	0/0:38,0:38:99:0,111,3520	0/0:26,0:26:75.25:0,75,2328	0/0:26,0:26:78.22:0,78,2356	0/0:27,0:27:81.28:0,81,2546	0/0:18,0:17:51.17:0,51,1605	0/0:18,0:18:48.15:0,48,1483	0/0:22,0:22:66.20:0,66,2051	0/0:17,0:17:51.16:0,51,1559	0/0:25,0:25:75.21:0,75,2140	0/0:24,0:24:72.23:0,72,2222	0/0:37,0:37:99:0,108,3201	0/0:19,0:19:51.15:0,51,1508	0/0:16,0:16:48.15:0,48,1388	0/0:23,0:23:69.24:0,69,2213	0/0:52,0:52:99:0,157,4774	0/0:32,0:32:96.32:0,96,2966	0/0:25,0:25:75.26:0,75,2421	0/0:39,0:39:99:0,111,3536	0/0:25,0:25:75.24:0,75,2342	0/0:27,0:27:81.28:0,81,2484	0/0:34,0:34:99:0,99,3022	0/0:23,0:23:69.22:0,69,2065
chr10	100028938	.	GA	G	9838.18	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.920;DP=763;FS=1.547;HRun=3;HaplotypeScore=75.3521;InbreedingCoeff=0.9992;MQ=90.77;MQ0=0;MQRankSum=-4.058;QD=34.04;ReadPosRankSum=-0.007;VQSLOD=5.2017;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,41:42:99:1227,99,0	0/0:7,0:7:21.07:0,21,302	0/0:28,0:28:78.26:0,78,1105	0/0:32,0:32:87.28:0,87,1199	0/0:27,0:27:81.27:0,81,1166	0/0:18,0:18:54.18:0,54,778	0/0:26,0:26:75.24:0,75,1062	1/1:3,37:40:99:1351,111,0	1/1:0,22:22:57.18:707,57,0	0/0:39,0:39:99:0,114,1619	0/0:21,0:21:63.21:0,63,907	0/0:26,0:26:78.26:0,78,1123	0/0:30,0:30:90.26:0,90,1232	0/0:28,0:28:78.26:0,78,1122	0/0:41,0:41:99:0,123,1738	0/0:31,0:31:90.28:0,90,1261	0/0:32,0:32:96.31:0,96,1364	1/1:0,19:19:51.16:632,51,0	1/1:1,26:27:75.23:930,75,0	1/1:1,20:21:60.19:744,60,0	1/1:0,45:45:99:1599,129,0	0/0:18,0:18:54.18:0,54,778	0/0:18,0:18:51.16:0,51,716	0/0:21,0:21:63.20:0,63,890	0/0:31,0:31:93.31:0,93,1337	1/1:1,32:33:96.24:1160,96,0	1/1:0,31:31:93.29:1153,93,0	1/1:0,9:9:27.08:335,27,0
chr10	100029198	.	A	AC	5252.28	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-1.407;DP=700;FS=6.127;HRun=7;HaplotypeScore=79.4320;InbreedingCoeff=0.9975;MQ=90.53;MQ0=0;MQRankSum=-1.493;QD=21.44;ReadPosRankSum=0.564;VQSLOD=4.5603;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:89.13:613,89,0	0/0:13,0:13:36.06:0,36,348	0/0:21,0:21:51.08:0,51,491	0/0:35,0:35:80.90:0,81,752	0/0:20,0:20:57.07:0,57,544	0/0:16,0:16:42.06:0,42,405	0/0:28,0:28:72.10:0,72,695	1/1:8,22:30:54.06:601,54,0	1/1:3,0:34:74.82:386,75,0	0/0:25,0:25:69.10:0,69,662	0/0:15,0:15:45.07:0,45,434	0/0:23,0:23:60.07:0,60,572	0/0:37,0:37:99:0,99,949	0/0:41,0:41:99:0,114,1095	0/0:38,0:38:99:0,108,1037	0/0:21,0:21:60.10:0,60,579	0/0:31,0:31:81.12:0,81,782	1/1:3,1:17:31.76:183,32,0	1/1:6,13:19:39.09:456,39,0	1/1:3,22:25:60.66:725,61,0	1/1:4,15:19:51.14:603,51,0	0/0:24,0:24:66.11:0,66,637	0/0:21,0:21:60.10:0,60,579	0/0:31,0:31:69.05:0,69,656	0/0:15,0:15:42.94:0,43,403	1/1:4,13:17:39.10:457,39,0	1/1:4,33:37:87:1046,87,0	1/1:2,8:10:15.05:181,15,0
chr10	100029200	.	C	CT	1995.54	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=13.243;DP=699;FS=1.536;HRun=0;HaplotypeScore=89.7603;InbreedingCoeff=0.6458;MQ=89.04;MQ0=0;MQRankSum=-2.706;QD=10.45;ReadPosRankSum=2.826;VQSLOD=4.2134;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,37:38:90.30:1346,90,0	0/0:13,0:13:39.10:0,39,525	0/0:19,0:19:54.17:0,54,738	0/0:34,0:34:93.23:0,93,1196	0/0:20,0:20:60.16:0,60,799	0/0:16,0:16:48.14:0,48,630	0/0:28,0:28:84.23:0,84,1103	0/1:31,0:30:81.70:82,0,221	0/0:34,0:34:79.63:0,80,435	0/0:27,0:27:75.23:0,75,1006	0/0:15,0:15:45.15:0,45,627	0/0:23,0:23:69.20:0,69,912	0/0:37,0:37:99:0,111,1478	0/0:42,0:42:99:0,123,1671	0/0:40,0:40:99:0,120,1611	0/0:22,0:22:63.20:0,63,863	0/0:31,0:31:93.26:0,93,1233	0/0:18,0:18:23.22:0,23,151	0/1:18,0:18:53.93:74,0,54	1/1:24,0:24:8.64:173,9,0	1/1:18,0:18:21.42:135,21,0	0/0:24,0:24:69.22:0,69,945	0/0:21,0:21:60.20:0,60,837	0/0:29,0:29:87.19:0,87,1101	0/0:15,0:15:44.88:0,45,598	1/1:15,0:15:5.76:93,6,0	1/1:37,0:37:8.98:234,9,0	0/1:10,0:10:24.84:32,0,25
chr10	100030685	.	AAAC	A	1887.86	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=0.728;DP=698;FS=8.939;HRun=0;HaplotypeScore=122.5015;InbreedingCoeff=0.1232;MQ=64.64;MQ0=2;MQRankSum=2.644;QD=10.37;ReadPosRankSum=-3.927;VQSLOD=1.9431;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,37:39:93.27:1522,93,0	0/0:18,0:18:54.18:0,54,1095	0/0:30,0:25:63.27:0,63,945	0/0:23,0:20:48.12:0,48,723	0/0:27,0:27:75.21:0,75,1431	0/0:29,0:29:84.21:0,84,1660	0/0:41,0:41:99:0,117,2158	0/1:29,0:29:99:165,0,282	0/1:10,0:10:14.71:15,0,224	0/0:35,0:35:99:0,102,2079	0/0:20,0:20:57.18:0,57,1133	0/0:25,0:25:72.23:0,72,1406	0/0:17,0:17:48.13:0,48,901	0/0:22,0:22:66.22:0,66,1355	0/0:24,0:24:69.22:0,69,1389	0/0:22,0:22:66.21:0,66,1278	0/0:34,0:34:99:0,102,1877	0/1:19,0:19:89.04:89,0,297	0/1:27,0:26:99:133,0,343	0/1:26,0:26:44.74:45,0,463	0/0:22,0:22:36.56:0,37,389	0/0:20,0:20:60.18:0,60,1215	0/0:29,0:29:87.27:0,87,1631	0/0:18,0:17:51.17:0,51,1008	0/0:20,0:20:60.16:0,60,1201	0/1:32,0:32:61.61:62,0,711	0/0:23,0:23:50.84:0,51,519	0/0:17,0:17:11.57:0,12,367
chr10	100030688	.	C	CAAACA	10678.25	PASS	AB=0.636;AC=16;AF=0.286;AN=56;BaseQRankSum=-14.964;DP=711;FS=1.884;HRun=0;HaplotypeScore=125.6778;InbreedingCoeff=0.6513;MQ=64.88;MQ0=2;MQRankSum=-1.623;QD=41.07;ReadPosRankSum=-3.510;VQSLOD=4.3051;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:39:17.81:18,0,573	0/0:18,0:18:54.16:0,54,949	0/0:28,0:24:60.35:0,60,682	0/0:23,0:20:45.10:0,45,627	0/0:25,0:25:69.21:0,69,1267	0/0:28,0:28:81.26:0,81,1577	0/0:38,0:38:99:0,108,1909	1/1:4,32:36:96.70:1795,97,0	0/1:0,0:9:50.68:51,0,55	0/0:36,0:36:99:0,102,1872	0/0:19,0:19:57.18:0,57,1055	0/0:25,0:25:72.22:0,72,1300	0/0:18,0:18:42.13:0,42,778	0/0:22,0:22:66.21:0,66,1209	0/0:23,0:23:69.21:0,69,1271	0/0:23,0:23:66.21:0,66,1237	0/0:34,0:34:96.30:0,96,1775	0/1:0,0:19:67.43:114,0,67	1/1:2,22:26:72.24:1626,72,0	1/1:3,23:27:69.08:1510,69,0	1/1:0,23:24:36.12:1051,36,0	0/0:22,0:22:48.46:0,48,1092	0/0:29,0:29:87.27:0,87,1550	0/0:19,0:18:57.09:0,57,989	0/0:21,0:21:57.18:0,57,1050	0/1:6,28:38:28.32:2091,0,28	1/1:2,20:24:42.02:1290,42,0	1/1:1,15:17:39.13:1133,39,0
chr10	100031220	.	G	GT	1905.70	PASS	AB=0.851;AC=18;AF=0.321;AN=56;BaseQRankSum=4.011;DP=536;FS=7.257;HRun=14;HaplotypeScore=92.4227;InbreedingCoeff=0.4314;MQ=67.67;MQ0=4;MQRankSum=-4.011;QD=7.87;ReadPosRankSum=-3.861;VQSLOD=1.6672;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:32:46.81:0,47,135	0/1:4,1:7:16.44:16,0,19	0/0:17,0:10:5.18:0,5,26	0/0:14,0:9:5.49:0,5,29	0/1:26,3:29:8.50:8,0,205	0/0:19,1:20:14.95:0,15,221	0/0:14,0:15:28.55:0,29,177	1/1:4,20:24:35.17:419,35,0	0/0:12,1:13:0.20:0,0,124	0/0:16,0:17:24.80:0,25,158	0/0:21,0:22:22.60:0,23,251	0/0:17,0:16:32.42:0,32,209	0/0:20,0:20:17.59:0,18,237	0/0:20,0:22:48.28:0,48,300	0/1:10,1:12:3.73:4,0,97	0/0:12,0:12:20.61:0,21,134	0/0:20,4:24:14.18:0,14,210	0/0:14,0:15:31.39:0,31,196	1/1:22,9:31:29.99:262,30,0	1/1:14,7:22:35.71:282,36,0	1/1:5,4:9:5.96:124,6,0	0/1:12,3:15:26.21:26,0,108	0/0:17,0:17:23.02:0,23,141	0/0:15,1:16:6.08:0,6,165	0/1:15,3:20:47.57:48,0,109	0/1:16,11:28:54.90:259,0,55	1/1:9,10:21:25.35:312,25,0	1/1:9,12:23:12.14:330,12,0
chr10	100031267	.	GGT	G	5932.08	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=10.270;DP=502;FS=10.579;HRun=0;HaplotypeScore=67.1195;InbreedingCoeff=0.9992;MQ=68.74;MQ0=2;MQRankSum=-4.186;QD=40.08;ReadPosRankSum=-0.480;VQSLOD=6.0613;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:75.26:0,75,1381	0/0:8,0:8:24.07:0,24,414	0/0:22,0:18:48.16:0,48,846	0/0:18,0:14:30.48:0,30,610	0/0:31,0:31:90.29:0,90,1630	0/0:15,0:15:45.15:0,45,837	0/0:19,0:19:54.17:0,54,972	1/1:0,17:17:51.17:751,51,0	1/1:0,14:14:36.12:530,36,0	0/0:23,0:23:66.23:0,66,1218	0/0:20,0:20:51.12:0,51,881	0/0:13,0:13:39.13:0,39,720	0/0:16,0:16:42.14:0,42,781	0/0:23,0:23:69.22:0,69,1237	0/0:16,0:16:48.15:0,48,850	0/0:8,0:8:24.08:0,24,447	0/0:35,0:35:96.33:0,96,1770	1/1:0,17:17:45.15:662,45,0	1/1:1,20:20:57.16:769,57,0	1/1:1,18:19:57.04:748,57,0	1/1:0,13:13:39.05:519,39,0	0/0:16,0:16:45.15:0,45,836	0/0:15,0:15:45.15:0,45,826	0/0:13,0:13:38.92:0,39,647	0/0:14,0:14:42.12:0,42,744	1/1:2,12:14:42.12:584,42,0	1/1:2,19:21:60.19:865,60,0	1/1:0,12:12:36.08:505,36,0
chr10	100031626	.	GT	G	10012.68	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.179;DP=684;FS=1.608;HRun=2;HaplotypeScore=67.4267;InbreedingCoeff=1.0000;MQ=77.38;MQ0=0;MQRankSum=-2.368;QD=34.53;ReadPosRankSum=1.432;VQSLOD=5.2360;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,46:47:99:1691,132,0	0/0:13,0:13:39.12:0,39,564	0/0:22,0:22:62.87:0,63,855	0/0:14,0:14:41.12:0,41,553	0/0:21,0:21:63.20:0,63,926	0/0:30,0:30:90.22:0,90,1263	0/0:31,0:31:93.30:0,93,1374	1/1:1,37:38:99:1277,102,0	1/1:0,17:17:48.07:600,48,0	0/0:20,0:20:57.15:0,57,813	0/0:16,0:16:48.15:0,48,700	0/0:19,0:19:57.19:0,57,850	0/0:18,0:18:54.14:0,54,741	0/0:28,0:28:81.27:0,81,1207	0/0:25,0:25:75.24:0,75,1103	0/0:27,0:27:78.25:0,78,1148	0/0:25,0:25:75.24:0,75,1103	1/1:0,31:31:84.27:1088,84,0	1/1:1,15:16:45.07:523,45,0	1/1:2,25:27:72.12:890,72,0	1/1:0,30:30:78.25:1012,78,0	0/0:24,0:24:72.24:0,72,1060	0/0:15,0:15:45.13:0,45,633	0/0:28,0:28:84.23:0,84,1178	0/0:18,0:18:51.12:0,51,738	1/1:0,25:25:72.15:885,72,0	1/1:1,33:34:90.29:1168,90,0	1/1:0,25:25:69.19:877,69,0
chr10	100031784	.	GAAA	G	1782.92	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=1.923;DP=471;FS=2.386;HRun=17;HaplotypeScore=79.8776;InbreedingCoeff=0.9050;MQ=71.52;MQ0=0;MQRankSum=0.642;QD=13.41;ReadPosRankSum=5.045;VQSLOD=1.3561;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:13:33.11:0,33,485	0/0:7,0:13:29.98:0,30,377	0/0:25,0:14:23.72:0,24,176	0/0:13,0:9:11.48:0,11,85	0/0:24,0:27:72.17:0,72,1060	0/0:19,0:22:61.42:0,61,889	0/0:8,0:13:22.25:0,22,276	1/1:4,11:17:1.38:234,1,0	1/1:5,11:16:27.51:304,28,0	0/0:19,0:20:39.13:0,39,565	0/0:7,0:10:18.04:0,18,233	0/0:19,0:22:51.07:0,51,707	0/0:20,0:20:39.02:0,39,521	0/0:16,0:21:57.17:0,57,835	0/0:17,0:20:36.07:0,36,486	0/0:24,0:24:54.17:0,54,828	0/0:20,0:22:57.10:0,57,840	1/1:5,13:20:38.57:373,39,0	1/1:5,7:12:17.70:184,18,0	1/1:5,5:11:8.42:78,8,0	1/1:4,4:9:2.68:56,3,0	0/0:10,0:11:24.06:0,24,377	0/0:14,0:17:45.09:0,45,640	0/0:8,0:10:24.05:0,24,351	0/0:10,0:15:30.08:0,30,462	1/1:8,6:15:13:151,13,0	1/1:10,15:27:39.49:477,39,0	1/1:2,4:6:11.87:123,12,0
chr10	100032210	.	GC	G	3923.90	PASS	AB=0.552;AC=13;AF=0.232;AN=56;BaseQRankSum=7.155;DP=636;FS=1.286;HRun=4;HaplotypeScore=69.6649;InbreedingCoeff=0.9338;MQ=85.27;MQ0=0;MQRankSum=-2.769;QD=30.66;ReadPosRankSum=-2.054;VQSLOD=3.0502;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.26:0,84,1157	0/0:10,0:10:30.10:0,30,420	0/0:19,0:19:51.14:0,51,672	0/0:22,0:22:56.94:0,57,690	0/0:21,0:21:63.21:0,63,875	0/0:22,0:22:60.20:0,60,837	0/0:28,0:28:81.27:0,81,1134	1/1:0,23:23:66.19:777,66,0	0/0:31,0:31:90.30:0,90,1260	0/0:22,0:22:60.20:0,60,838	0/0:13,0:13:36.12:0,36,502	0/0:25,0:25:72.24:0,72,1007	0/0:28,0:28:78.26:0,78,1092	0/0:28,0:28:81.23:0,81,1084	0/0:26,0:26:78.25:0,78,1075	0/0:21,0:21:63.21:0,63,882	0/0:38,0:38:99:0,108,1512	0/0:38,0:38:99:0,111,1549	1/1:0,15:15:45.14:537,45,0	1/1:1,13:14:24.07:288,24,0	1/1:2,26:28:69.21:828,69,0	0/0:11,0:11:33.11:0,33,462	0/0:15,0:15:39.13:0,39,545	0/0:44,0:44:99:0,132,1830	0/0:16,0:16:45.15:0,45,630	0/1:3,13:16:2.93:379,0,3	1/1:0,23:23:69.21:827,69,0	1/1:0,9:9:24.07:288,24,0
chr10	100032458	.	CT	C	431.80	PASS	AB=0.929;AC=7;AF=0.125;AN=56;BaseQRankSum=4.505;DP=530;FS=9.760;HRun=13;HaplotypeScore=83.2251;InbreedingCoeff=0.1542;MQ=67.31;MQ0=3;MQRankSum=0.169;QD=2.70;ReadPosRankSum=3.004;VQSLOD=-0.6158;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,28:42:47.92:496,48,0	0/0:10,1:13:7.97:0,8,225	0/0:12,0:10:11.99:0,12,104	0/0:9,0:7:0.22:0,0,52	0/0:20,0:21:32.97:0,33,296	0/0:15,2:14:23.98:0,24,223	0/0:32,1:33:32.18:0,32,474	0/0:23,0:23:39.70:0,40,200	0/1:8,1:10:3.99:4,0,113	0/0:12,0:14:23.85:0,24,209	0/1:15,0:15:25.10:25,0,99	0/0:18,0:18:10.99:0,11,236	0/0:18,1:19:18.34:0,18,312	0/1:13,0:14:10.97:11,0,177	0/0:14,0:14:27:0,27,244	0/0:8,0:8:16.27:0,16,149	0/1:37,7:45:16.55:17,0,651	0/1:27,5:33:2.85:3,0,432	0/0:15,0:15:34.10:0,34,172	0/0:11,0:11:23.33:0,23,137	0/0:36,0:36:86.89:0,87,482	0/0:9,0:9:15.02:0,15,146	0/0:16,0:16:32.93:0,33,292	0/0:23,0:26:53.58:0,54,475	0/0:8,1:11:4.92:0,5,187	0/0:25,0:24:42.29:0,42,210	0/0:14,0:14:23.03:0,23,132	0/0:6,0:5:8.77:0,9,50
chr10	100032471	.	TC	T	126.86	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.609;DP=484;FS=7.862;HRun=2;HaplotypeScore=78.5840;InbreedingCoeff=0.7847;MQ=58.09;MQ0=5;MQRankSum=-0.197;QD=9.76;ReadPosRankSum=1.408;VQSLOD=1.1176;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:29.81:0,30,174	0/0:11,0:11:28.86:0,29,308	0/0:6,0:4:11.76:0,12,105	0/0:6,0:4:2.34:0,2,49	0/0:17,0:17:40.86:0,41,422	0/0:16,0:15:33.02:0,33,365	0/0:31,0:31:74.83:0,75,789	0/0:18,0:18:53.67:0,54,536	0/0:8,0:8:22.81:0,23,227	0/0:18,0:18:47.13:0,47,444	1/1:9,4:13:22.11:219,22,0	0/0:16,0:16:40.59:0,41,440	0/0:19,0:19:38.88:0,39,492	0/0:13,0:13:30.75:0,31,332	0/0:16,0:15:38.95:0,39,390	0/0:10,0:10:27:0,27,287	0/0:37,0:37:88.05:0,88,1064	0/0:29,0:28:58.71:0,59,651	0/0:16,0:16:32.97:0,33,340	0/0:10,0:10:25.83:0,26,270	0/0:34,0:34:90.19:0,90,1029	0/0:12,0:12:26.96:0,27,281	0/0:14,0:14:32.73:0,33,370	0/0:22,0:22:60.06:0,60,665	0/0:15,0:15:37.86:0,38,385	0/0:20,0:19:54.01:0,54,579	0/0:14,0:14:29.68:0,30,311	0/0:7,0:6:12:0,12,130
chr10	100032542	.	A	ACC	1784.99	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=7.642;DP=533;FS=0.506;HRun=7;HaplotypeScore=75.0902;InbreedingCoeff=0.8864;MQ=57.05;MQ0=35;MQRankSum=-4.796;QD=8.23;ReadPosRankSum=-1.185;VQSLOD=-0.5858;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:31:34.03:132,34,0	0/0:7,0:7:9.01:0,9,95	0/1:61,0:10:5.81:6,0,77	0/0:66,0:17:20.77:0,21,261	0/0:18,0:18:39.07:0,39,429	0/0:10,0:10:24.02:0,24,251	0/0:25,0:25:47.28:0,47,497	1/1:11,2:12:17.97:219,18,0	1/1:9,1:13:21.26:109,21,0	0/0:20,0:19:36.09:0,36,411	0/0:16,0:16:35.98:0,36,381	0/0:22,0:21:48.04:0,48,519	0/0:14,0:13:27.06:0,27,303	0/0:16,0:16:42.10:0,42,461	0/0:18,0:18:48.11:0,48,534	0/0:7,0:7:18.04:0,18,189	0/0:27,0:26:55.28:0,55,600	1/1:17,1:20:18.18:65,18,0	1/1:4,2:6:15.03:200,15,0	1/1:7,1:8:9.01:117,9,0	1/1:10,3:12:18.06:248,18,0	0/0:15,0:15:30.08:0,30,349	0/0:7,0:7:8.89:0,9,84	0/0:10,0:9:15.03:0,15,170	0/0:16,0:16:33.07:0,33,362	1/1:13,5:18:33.07:475,33,0	1/1:6,12:19:24.02:329,24,0	1/1:5,3:7:5.99:98,6,0
chr10	100032557	.	CT	C	604.35	PASS	AB=0.746;AC=13;AF=0.232;AN=56;BaseQRankSum=1.619;DP=552;FS=8.911;HRun=14;HaplotypeScore=67.2483;InbreedingCoeff=0.6491;MQ=62.92;MQ0=32;MQRankSum=2.044;QD=3.71;ReadPosRankSum=-3.063;VQSLOD=-0.3928;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:31:57.13:0,57,338	0/0:4,0:4:11.93:0,12,101	0/1:75,0:17:12.23:12,0,74	0/0:66,0:17:3.44:0,3,26	0/0:25,1:26:18.98:0,19,383	0/0:12,0:12:24:0,24,212	0/0:20,0:19:7.01:0,7,319	1/1:3,6:9:19.76:117,20,0	0/0:15,0:18:32.84:0,33,189	0/0:16,0:15:26.82:0,27,226	0/0:14,0:15:20.85:0,21,178	0/0:22,0:21:50.82:0,51,425	0/0:12,0:11:12.01:0,12,111	0/0:15,0:15:11.35:0,11,230	0/0:15,0:15:9.44:0,9,227	0/0:12,0:12:26.85:0,27,221	0/0:25,0:24:42.31:0,42,515	0/0:18,0:22:30.96:0,31,232	0/1:2,6:8:20.59:99,0,21	1/1:5,8:13:13.62:116,14,0	0/1:7,7:13:3.33:15,0,3	0/0:16,0:16:32.90:0,33,280	0/0:10,0:10:14.04:0,14,113	0/0:9,0:8:23.46:0,23,183	0/0:19,0:19:18.65:0,19,182	1/1:6,13:18:33.17:270,33,0	1/1:12,5:17:14.07:98,14,0	1/1:6,1:6:8.73:52,9,0
chr10	100034680	.	GT	G	4632.50	PASS	AB=0.900;AC=19;AF=0.339;AN=56;BaseQRankSum=12.806;DP=680;FS=14.174;HRun=9;HaplotypeScore=74.7660;InbreedingCoeff=0.9400;MQ=85.54;MQ0=0;MQRankSum=-2.036;QD=21.25;ReadPosRankSum=0.703;VQSLOD=4.3721;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,102,1176	0/1:8,1:9:0.39:0,0,249	0/0:25,0:25:60.14:0,60,658	0/0:21,0:21:35.69:0,36,383	0/0:41,0:42:99:0,105,1181	0/0:19,0:19:54.13:0,54,610	0/0:24,0:24:60.17:0,60,683	1/1:7,27:34:77.98:702,78,0	1/1:0,18:18:54.03:494,54,0	0/0:26,0:26:72.20:0,72,812	0/0:21,0:21:51.14:0,51,579	0/0:16,1:17:20.69:0,21,471	0/0:22,0:22:60.17:0,60,684	0/0:29,0:29:81.24:0,81,931	0/0:26,0:26:75.21:0,75,855	0/0:21,0:21:60.16:0,60,681	0/0:22,0:23:63.02:0,63,706	1/1:2,20:22:48.01:439,48,0	1/1:3,13:16:21.33:331,21,0	1/1:1,27:28:78.04:712,78,0	1/1:2,22:23:68.99:623,69,0	0/0:24,0:24:70.07:0,70,787	0/0:28,0:28:81.24:0,81,934	0/0:30,0:30:87.20:0,87,978	0/0:22,0:22:54.15:0,54,613	1/1:5,34:39:35.85:836,36,0	1/1:6,18:24:48.02:439,48,0	1/1:1,3:4:6:55,6,0
chr10	100035353	.	CTCTT	C	2112	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=8.974;DP=635;FS=0.606;HRun=0;HaplotypeScore=101.5694;InbreedingCoeff=0.7759;MQ=77.32;MQ0=0;MQRankSum=-2.130;QD=39.11;ReadPosRankSum=2.160;VQSLOD=3.5920;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.22:0,69,1843	0/0:9,0:9:27.09:0,27,737	0/0:17,0:17:41.32:0,41,901	0/1:10,0:10:28.59:29,0,469	0/0:29,0:29:87.25:0,87,2302	0/0:16,0:16:48.13:0,48,1210	0/0:14,0:14:39.12:0,39,996	0/0:37,0:37:99:0,99,2627	1/1:1,34:35:96.33:1896,96,0	0/0:36,0:36:99:0,105,2628	0/0:12,0:12:36.12:0,36,1007	0/0:26,0:26:78.25:0,78,2097	0/0:31,0:31:93.27:0,93,2400	0/0:27,0:27:78.25:0,78,2108	0/0:38,0:38:99:0,114,3121	0/0:26,0:26:75.24:0,75,2001	0/0:23,0:23:69.24:0,69,1890	1/1:1,8:9:17.98:316,18,0	0/0:22,0:22:63.19:0,63,1556	0/0:19,0:19:51.16:0,51,1366	0/0:22,0:22:66.17:0,66,1656	0/0:12,0:12:33.11:0,33,889	0/0:33,0:33:99:0,99,2563	0/0:20,0:20:60.19:0,60,1619	0/0:22,0:22:66.20:0,66,1727	0/0:25,0:25:75.24:0,75,1952	0/0:31,0:31:93.23:0,93,2473	0/0:10,0:10:30.05:0,30,680
chr10	100035673	.	CA	C	1046.77	PASS	AB=0.594;AC=17;AF=0.304;AN=56;BaseQRankSum=5.551;DP=434;FS=18.236;HRun=9;HaplotypeScore=50.8196;InbreedingCoeff=0.8569;MQ=56.76;MQ0=50;MQRankSum=-0.958;QD=7.75;ReadPosRankSum=-0.793;VQSLOD=0.1006;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,1:21:0.47:0,0,1	0/0:6,0:6:15.04:0,15,170	0/0:13,0:5:11.52:0,12,110	0/0:17,0:10:15.83:0,16,141	0/0:15,0:15:42.43:0,42,441	0/0:15,0:12:32.37:0,32,329	0/0:17,0:17:36.54:0,37,385	1/1:11,9:8:17.94:160,18,0	1/1:6,0:11:2.57:20,3,0	0/0:17,0:14:33.09:0,33,371	0/0:11,0:11:23.84:0,24,236	0/0:13,0:11:24.44:0,24,250	0/0:8,0:5:14.98:0,15,153	0/0:8,0:7:18.04:0,18,197	0/0:14,0:14:24.07:0,24,271	0/0:11,0:11:24.54:0,25,276	0/0:37,0:31:78.08:0,78,815	1/1:10,3:13:7.93:52,8,0	1/1:7,4:7:17.96:156,18,0	1/1:7,8:10:21:189,21,0	1/1:9,10:15:22.65:215,23,0	0/0:13,0:12:27.06:0,27,291	0/0:18,0:17:35.58:0,36,375	0/0:20,0:18:27.07:0,27,300	0/0:23,0:21:48.11:0,48,533	0/1:6,13:14:0.77:233,0,1	1/1:5,7:8:14.71:136,15,0	1/1:1,5:6:9:80,9,0
chr10	100035776	.	T	TCTC	4236.61	PASS	AB=0.615;AC=19;AF=0.339;AN=56;BaseQRankSum=-4.776;DP=425;FS=7.636;HRun=0;HaplotypeScore=72.7623;InbreedingCoeff=0.8249;MQ=75.33;MQ0=16;MQRankSum=-1.915;QD=25.83;ReadPosRankSum=-4.702;VQSLOD=2.9946;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:17:17.79:274,18,0	0/0:2,0:2:6.02:0,6,100	0/0:40,0:24:60.55:0,61,891	0/0:33,0:17:34.29:0,34,454	0/0:8,0:7:18.04:0,18,272	0/0:14,0:14:39.12:0,39,609	0/0:17,0:17:48.16:0,48,776	1/1:14,0:12:33.09:637,33,0	1/1:10,0:10:26.98:549,27,0	0/0:12,0:12:30.10:0,30,496	0/0:7,0:7:21.07:0,21,334	0/0:16,0:15:39.10:0,39,609	0/0:4,0:4:12.04:0,12,184	0/0:8,0:8:24.08:0,24,393	0/0:18,0:18:48.15:0,48,758	0/0:13,0:13:39.04:0,39,581	0/0:32,0:32:82.62:0,83,1353	1/1:19,2:16:30:359,30,0	1/1:5,12:16:44.93:845,45,0	1/1:13,1:13:14.85:250,15,0	1/1:29,0:25:4.47:567,4,0	0/0:4,0:4:6.02:0,6,100	0/0:4,0:4:9.03:0,9,149	0/0:21,0:19:51.16:0,51,768	0/0:8,0:8:18.06:0,18,298	0/1:6,9:15:5.24:540,0,5	1/1:13,1:14:7.74:122,8,0	1/1:9,0:9:2.56:92,3,0
chr10	100035779	.	C	CCTCGTGT	4693.54	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-3.681;DP=430;FS=0.478;HRun=0;HaplotypeScore=99.8669;InbreedingCoeff=0.8657;MQ=72.52;MQ0=18;MQRankSum=-2.922;QD=29.71;ReadPosRankSum=-5.067;VQSLOD=3.4690;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:13:17.73:274,18,0	0/0:2,0:2:6.02:0,6,133	0/0:39,0:23:60.55:0,61,890	0/0:32,0:16:34.29:0,34,454	0/0:6,0:6:18.06:0,18,320	0/0:15,0:15:39.13:0,39,747	0/0:21,0:22:27.15:0,27,915	1/1:14,0:12:33.56:638,34,0	1/1:8,0:8:24.08:533,24,0	0/0:11,0:11:30.10:0,30,564	0/0:8,0:8:24.05:0,24,355	0/0:16,0:15:38.77:0,39,608	0/0:4,0:4:12.04:0,12,184	0/0:8,0:8:24.08:0,24,426	0/0:18,0:18:48.15:0,48,851	0/0:13,0:13:39.04:0,39,733	0/0:34,0:33:79.80:0,80,1648	1/1:20,0:15:22.52:255,23,0	1/1:15,0:13:39.13:815,39,0	1/1:17,0:16:27.04:428,27,0	1/1:37,0:33:13.60:702,14,0	0/0:4,0:4:12:0,12,186	0/0:5,0:5:8.74:0,9,175	0/0:18,0:22:57.66:0,58,1119	0/0:9,0:9:18.05:0,18,298	0/1:12,0:11:35.33:458,0,35	1/1:3,9:13:8.15:253,8,0	1/1:6,0:6:18.06:338,18,0
chr10	100035781	.	T	TC	1823.01	PASS	AB=0.839;AC=14;AF=0.250;AN=56;BaseQRankSum=7.930;DP=430;FS=25.446;HRun=0;HaplotypeScore=68.3815;InbreedingCoeff=0.4068;MQ=68.94;MQ0=18;MQRankSum=-0.914;QD=12.15;ReadPosRankSum=-0.645;VQSLOD=1.5570;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:10:8.90:127,9,0	0/0:3,0:3:6.02:0,6,83	0/0:38,0:22:54.99:0,55,723	0/0:30,0:14:30.07:0,30,376	0/0:7,0:6:18.06:0,18,249	0/0:16,0:16:39.10:0,39,504	0/0:25,0:24:51.40:0,51,675	0/1:5,10:13:14.72:312,0,15	1/1:0,8:8:24.08:329,24,0	0/0:12,0:12:33.11:0,33,453	0/0:8,0:8:24.06:0,24,311	0/0:17,0:16:36.57:0,37,477	0/0:4,0:4:11.98:0,12,126	0/0:8,0:8:24.08:0,24,329	0/0:18,0:18:44.93:0,45,595	0/0:11,0:11:33.09:0,33,440	0/0:35,0:34:92.46:0,92,1201	1/1:5,4:13:23.55:202,24,0	0/1:15,0:13:3.28:367,0,3	0/1:11,4:15:79.30:79,0,97	0/1:15,21:32:99:290,0,123	0/0:5,0:4:12.04:0,12,163	0/0:7,0:7:12.03:0,12,162	0/0:26,0:24:59.48:0,59,686	0/0:10,0:10:16.42:0,16,266	0/1:13,0:12:65.24:225,0,65	1/1:11,0:10:6.76:34,7,0	0/1:6,0:6:30.91:31,0,82
chr10	100036172	.	GA	G	546.36	PASS	AB=0.960;AC=3;AF=0.054;AN=56;BaseQRankSum=6.528;DP=551;FS=3.603;HRun=9;HaplotypeScore=68.1092;InbreedingCoeff=0.6358;MQ=85.01;MQ0=2;MQRankSum=-2.234;QD=11.38;ReadPosRankSum=2.798;VQSLOD=2.9076;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:69.04:631,69,0	0/0:6,0:6:18.05:0,18,208	0/0:45,0:32:14.58:0,15,462	0/1:23,1:18:20.56:21,0,148	0/0:19,0:19:57.17:0,57,657	0/0:22,0:22:60.15:0,60,674	0/0:19,0:19:51.15:0,51,585	0/0:29,0:29:81.19:0,81,897	0/0:20,0:20:57.16:0,57,650	0/0:28,0:28:75.21:0,75,857	0/0:13,0:13:39.11:0,39,442	0/0:20,0:20:57.12:0,57,627	0/0:18,0:18:51.14:0,51,579	0/0:16,0:16:45.13:0,45,517	0/0:23,1:24:41.73:0,42,724	0/0:13,0:13:33.07:0,33,361	0/0:27,0:27:69.15:0,69,760	0/0:18,0:18:51.15:0,51,588	0/0:26,0:26:75.22:0,75,861	0/0:17,0:16:33.09:0,33,372	0/0:14,0:14:39.12:0,39,449	0/0:13,0:13:39.12:0,39,450	0/0:14,0:14:35.90:0,36,366	0/0:13,0:13:33.09:0,33,371	0/0:22,0:22:63.17:0,63,711	0/0:20,0:20:57.17:0,57,658	0/0:20,0:20:60.18:0,60,692	0/0:7,0:7:21.06:0,21,242
chr10	100036593	.	TG	T	1478.10	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.058;DP=618;FS=3.117;HRun=8;HaplotypeScore=61.1367;InbreedingCoeff=0.9952;MQ=74.22;MQ0=1;MQRankSum=-4.409;QD=21.42;ReadPosRankSum=3.658;VQSLOD=4.1113;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,35:39:93.14:897,93,0	0/0:12,0:12:30.08:0,30,351	0/0:19,0:19:32.33:0,32,414	0/0:13,1:14:18.14:0,18,176	0/0:25,0:25:72.21:0,72,853	0/0:29,0:29:87.21:0,87,1001	0/0:17,0:17:45.12:0,45,528	0/0:23,0:23:51.14:0,51,595	1/1:0,13:13:30.05:290,30,0	0/0:24,0:24:60.15:0,60,700	0/0:27,0:27:75.18:0,75,861	0/0:19,0:19:54.15:0,54,639	0/0:20,0:20:48.15:0,48,578	0/0:23,0:23:54.13:0,54,614	0/0:33,0:33:87.74:0,88,1048	0/0:17,0:17:45.07:0,45,502	0/0:31,0:31:90.22:0,90,1055	1/1:2,15:17:45.07:434,45,0	0/0:22,0:22:54.12:0,54,605	0/0:19,0:19:54.15:0,54,638	0/0:22,0:22:54.15:0,54,638	0/0:21,0:21:57.10:0,57,656	0/0:27,0:27:60.17:0,60,709	0/0:19,0:19:57.12:0,57,659	0/0:29,0:29:84.24:0,84,998	0/0:28,0:28:69.19:0,69,807	0/0:19,0:18:54.14:0,54,625	0/0:9,0:9:21.03:0,21,228
chr10	100037373	.	T	TC	1467.47	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.370;DP=604;FS=12.666;HRun=3;HaplotypeScore=57.9231;InbreedingCoeff=0.9998;MQ=84.18;MQ0=0;MQRankSum=-4.295;QD=38.62;ReadPosRankSum=1.766;VQSLOD=2.9011;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.27:0,87,1044	0/0:12,0:12:33.10:0,33,395	0/0:17,0:17:51.14:0,51,586	0/0:20,0:20:50.91:0,51,551	0/0:29,0:29:75.23:0,75,900	0/0:26,0:26:66.20:0,66,792	0/0:24,0:24:72.22:0,72,864	0/0:28,0:28:72.20:0,72,845	1/1:0,18:18:54.18:755,54,0	0/0:18,0:18:51.16:0,51,611	0/0:24,0:24:69.21:0,69,828	0/0:16,0:16:45.14:0,45,538	0/0:15,0:15:42.13:0,42,503	0/0:20,0:20:57.17:0,57,684	0/0:22,0:22:60.17:0,60,709	0/0:20,0:20:57.13:0,57,666	0/0:28,0:28:75.23:0,75,900	1/1:0,20:20:60.20:834,60,0	0/0:20,0:20:54.16:0,54,648	0/0:22,0:22:54.14:0,54,624	0/0:25,0:25:69.21:0,69,827	0/0:15,0:15:42.13:0,42,503	0/0:20,0:20:57.15:0,57,670	0/0:18,0:18:51.14:0,51,600	0/0:31,0:31:87.27:0,87,1043	0/0:17,0:17:51.11:0,51,593	0/0:27,0:27:75.23:0,75,898	0/0:23,0:23:69.21:0,69,828
chr10	100038504	.	T	TCTGATG	942.69	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.433;DP=599;FS=1.217;HRun=0;HaplotypeScore=119.7228;InbreedingCoeff=0.9870;MQ=73.85;MQ0=1;MQRankSum=-5.367;QD=62.85;ReadPosRankSum=-0.288;VQSLOD=3.8646;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,9:14:30.10:1037,30,0	0/0:14,0:14:42.13:0,42,943	0/0:15,0:15:36.12:0,36,804	0/0:9,0:9:21.07:0,21,463	0/0:29,0:29:87.30:0,87,2083	0/0:28,0:28:81.23:0,81,1754	0/0:12,0:12:36.12:0,36,844	0/0:50,0:50:99:0,141,3190	0/0:23,0:23:69.24:0,69,1659	0/0:36,0:36:99:0,108,2550	0/0:21,0:21:63.21:0,63,1466	0/0:27,0:27:78.26:0,78,1785	0/0:17,0:17:48.16:0,48,1108	0/0:19,0:19:51.18:0,51,1203	0/0:18,0:18:51.18:0,51,1200	0/0:28,0:28:84.29:0,84,1999	0/0:18,0:18:54.18:0,54,1237	0/0:15,0:15:43.70:0,44,961	0/0:22,0:22:66.22:0,66,1514	0/0:23,0:23:66.21:0,66,1513	0/0:7,0:7:21.07:0,21,500	0/0:35,0:35:93.32:0,93,2168	0/0:20,0:20:60.19:0,60,1352	0/0:15,0:15:33.11:0,33,793	0/0:18,0:18:54.17:0,54,1170	0/0:29,0:29:87.28:0,87,2003	0/0:29,0:29:84.29:0,84,1997	0/0:7,0:7:21.05:0,21,456
chr10	100038685	.	C	CAATATTGATATGCATCAAGGG	794.91	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.100;DP=652;FS=4.038;HRun=0;HaplotypeScore=337.7483;InbreedingCoeff=0.9824;MQ=80.19;MQ0=0;MQRankSum=-3.780;QD=52.99;ReadPosRankSum=-1.937;VQSLOD=1.8069;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,5:15:15.05:883,15,0	0/0:9,0:9:27.05:0,27,1277	0/0:15,0:15:42.13:0,42,1716	0/0:17,0:17:48.16:0,48,1879	0/0:31,0:31:87.30:0,87,4987	0/0:31,0:31:90.27:0,90,5137	0/0:24,0:24:66.23:0,66,3685	0/0:33,0:33:93.18:0,93,4273	0/0:19,0:19:57.20:0,57,3200	0/0:32,0:32:88.50:0,88,4160	0/0:29,0:29:87.30:0,87,4746	0/0:32,0:32:93.32:0,93,4704	0/0:23,0:23:63.20:0,63,2973	0/0:17,0:17:51.18:0,51,2774	0/0:29,0:29:75.21:0,75,4179	0/0:30,0:30:90.27:0,90,4760	0/0:17,0:17:48.14:0,48,2513	0/0:26,0:26:75.26:0,75,3939	0/0:20,0:20:54.13:0,54,2391	0/0:30,0:30:90.19:0,90,4148	0/0:24,0:24:69.02:0,69,3535	0/0:30,0:30:89.03:0,89,4594	0/0:27,0:27:72.25:0,72,3970	0/0:13,0:13:39.13:0,39,2298	0/0:19,0:19:54.17:0,54,2757	0/0:29,0:29:87.29:0,87,4569	0/0:21,0:21:63.22:0,63,3480	0/0:10,0:10:30.10:0,30,1608
chr10	100039063	.	G	GA	7878.39	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-17.305;DP=636;FS=1.016;HRun=6;HaplotypeScore=57.4933;InbreedingCoeff=0.9989;MQ=81.98;MQ0=0;MQRankSum=-0.492;QD=31.39;ReadPosRankSum=0.257;VQSLOD=5.2405;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:33:81.26:1019,81,0	0/0:13,0:13:36.08:0,36,367	0/0:15,0:15:24.03:0,24,234	0/0:19,0:19:35.92:0,36,337	0/0:27,0:27:75.13:0,75,749	0/0:24,0:24:66.13:0,66,666	0/0:22,0:22:63.11:0,63,630	1/1:4,29:33:87.24:1065,87,0	1/1:5,22:27:60.19:755,60,0	0/0:23,0:23:63.14:0,63,643	0/0:34,0:34:90.20:0,90,918	0/0:17,0:17:48.11:0,48,490	0/0:26,0:26:66.14:0,66,668	0/0:21,0:21:57.11:0,57,574	0/0:21,0:21:48.08:0,48,477	0/0:22,0:22:60.14:0,60,612	0/0:12,0:12:33.05:0,33,328	1/1:1,10:11:21.06:264,21,0	1/1:1,13:14:39.12:491,39,0	1/1:2,34:36:99:1260,102,0	1/1:2,12:14:33.11:415,33,0	0/0:30,0:30:78.16:0,78,785	0/0:25,0:25:62.96:0,63,621	0/0:16,0:16:33.03:0,33,326	0/0:18,0:17:45.10:0,45,459	1/1:3,27:30:53.61:949,54,0	1/1:3,29:33:78.25:981,78,0	1/1:0,20:20:54.17:679,54,0
chr10	100041560	.	C	CTTT	2738.07	PASS	AB=0.831;AC=22;AF=0.393;AN=56;BaseQRankSum=1.218;DP=571;FS=0.000;HRun=13;HaplotypeScore=98.4220;InbreedingCoeff=0.6966;MQ=72.41;MQ0=1;MQRankSum=-0.458;QD=10.25;ReadPosRankSum=-3.494;VQSLOD=0.0414;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:27:66.67:67,0,125	0/0:10,0:10:26.98:0,27,283	1/1:19,0:12:0.89:2,1,0	0/1:23,0:16:16.39:16,0,57	0/0:32,0:34:57.93:0,58,604	0/0:16,0:17:13.32:0,13,303	0/0:9,0:11:17.70:0,18,164	1/1:24,9:34:27.07:437,27,0	0/1:8,0:15:4.90:5,0,20	0/0:17,0:19:28.23:0,28,305	0/0:27,0:28:47.58:0,48,501	0/0:17,0:17:23.69:0,24,258	0/1:12,0:12:4.85:5,0,102	0/0:21,0:21:29.62:0,30,323	0/0:16,0:20:35.46:0,35,316	0/0:18,0:18:41.90:0,42,452	0/0:27,0:28:44.44:0,44,469	1/1:3,0:14:15.45:52,15,0	1/1:10,5:15:17.96:182,18,0	1/1:7,9:23:49.20:617,49,0	1/1:5,7:16:18.48:248,18,0	0/0:16,0:22:28.06:0,28,332	0/0:21,0:21:37.33:0,37,353	0/0:19,0:19:37.41:0,37,402	0/0:18,0:19:32.61:0,33,332	1/1:7,11:21:40.27:499,40,0	1/1:8,12:26:31.91:430,32,0	1/1:7,10:19:24.03:381,24,0
chr10	100043074	.	A	AG	608.51	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.631;DP=554;FS=5.675;HRun=8;HaplotypeScore=61.8227;InbreedingCoeff=0.9720;MQ=69.43;MQ0=1;MQRankSum=-0.386;QD=18.44;ReadPosRankSum=1.898;VQSLOD=3.5461;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:84:0,84,756	0/0:16,0:17:44.05:0,44,390	0/0:10,0:10:13.55:0,14,114	0/0:18,0:14:11.99:0,12,196	0/0:22,0:23:56.05:0,56,499	0/0:21,0:21:54:0,54,484	0/0:14,0:14:36.02:0,36,329	0/0:21,0:21:38.99:0,39,353	1/1:4,11:15:27.08:312,27,0	0/0:26,0:26:53.99:0,54,490	0/0:15,0:15:29.92:0,30,263	0/0:22,0:22:60.03:0,60,549	0/0:25,0:25:68.99:0,69,616	0/0:24,0:24:59.93:0,60,541	0/0:14,0:14:36.01:0,36,329	0/0:16,0:16:48.01:0,48,435	0/0:19,0:19:45.01:0,45,412	1/1:4,14:18:37.35:418,37,0	0/0:15,0:15:35.51:0,36,294	0/0:27,0:27:66:0,66,603	0/0:23,0:23:57.01:0,57,516	0/0:21,0:21:57.02:0,57,518	0/0:21,0:21:53.98:0,54,481	0/0:15,0:15:42.01:0,42,381	0/0:26,0:26:75.04:0,75,685	0/0:14,0:14:39.01:0,39,357	0/0:28,0:28:78.03:0,78,713	0/0:12,0:12:32.96:0,33,285
chr10	100043220	.	A	AT	904.14	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.574;DP=631;FS=5.126;HRun=5;HaplotypeScore=58.3044;InbreedingCoeff=0.9993;MQ=80.59;MQ0=0;MQRankSum=-0.420;QD=27.40;ReadPosRankSum=2.275;VQSLOD=3.9203;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,129,1385	0/0:13,0:13:36.09:0,36,386	0/0:14,0:14:36.09:0,36,384	0/0:22,0:21:51.13:0,51,548	0/0:28,0:28:78.20:0,78,837	0/0:22,0:22:63.16:0,63,677	0/0:12,0:12:33.08:0,33,355	0/0:36,0:35:98.95:0,99,1023	1/1:2,17:19:39.13:513,39,0	0/0:27,0:27:72.17:0,72,766	0/0:12,0:12:33.08:0,33,354	0/0:21,0:21:60.15:0,60,645	0/0:31,0:31:93.23:0,93,998	0/0:13,0:13:33.08:0,33,355	0/0:17,0:17:51.13:0,51,547	0/0:14,0:14:39.10:0,39,419	0/0:25,0:25:75.16:0,75,795	1/1:0,14:14:39.13:513,39,0	0/0:19,0:19:54.12:0,54,573	0/0:32,0:32:96.24:0,96,1026	0/0:22,0:22:63.16:0,63,677	0/0:24,0:24:60.15:0,60,644	0/0:23,0:23:63.16:0,63,677	0/0:28,0:28:78.19:0,78,838	0/0:25,0:25:72.18:0,72,774	0/0:25,0:25:72.17:0,72,767	0/0:31,0:31:93.23:0,93,999	0/0:14,0:14:42.11:0,42,451
chr10	100043319	.	GCT	G	8190.99	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.026;DP=712;FS=5.098;HRun=0;HaplotypeScore=92.2448;InbreedingCoeff=0.9984;MQ=87.63;MQ0=0;MQRankSum=-8.088;QD=33.16;ReadPosRankSum=0.039;VQSLOD=7.0777;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,42:45:99:1358,102,0	0/0:8,0:8:24.07:0,24,365	0/0:29,0:29:69.68:0,70,1091	0/0:45,0:44:93.13:0,93,1600	0/0:27,0:27:69.24:0,69,1194	0/0:28,0:28:75.26:0,75,1295	0/0:18,0:18:54.14:0,54,903	1/1:7,29:36:87.25:1109,87,0	1/1:1,22:23:63.21:837,63,0	0/0:28,0:28:75.26:0,75,1292	0/0:18,0:18:48.16:0,48,824	0/0:33,0:33:84.26:0,84,1400	0/0:16,0:16:48.15:0,48,799	0/0:21,0:21:57.20:0,57,987	0/0:27,0:27:72.23:0,72,1220	0/0:27,1:28:35.29:0,35,1176	0/0:30,0:30:87.30:0,87,1506	1/1:2,10:12:33.11:436,33,0	1/1:5,13:18:39.13:519,39,0	1/1:1,24:25:66.17:859,66,0	1/1:0,28:28:81.27:1079,81,0	0/0:22,0:22:48.16:0,48,808	0/0:18,0:18:48.16:0,48,831	0/0:41,0:40:99:0,120,2078	0/0:28,0:28:78.27:0,78,1350	1/1:3,24:27:44.31:876,44,0	1/1:1,23:24:66.22:879,66,0	1/1:1,8:9:18.06:240,18,0
chr10	100046368	.	T	TA	941.65	PASS	AB=0.571;AC=29;AF=0.906;AN=32;DP=134;FS=0.000;HRun=0;HaplotypeScore=15.3297;InbreedingCoeff=0.0764;MQ=16.04;MQ0=93;QD=11.77;VQSLOD=3.4980;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,3:3:3.01:45,3,0	1/1:0,1:1:3.01:45,3,0	./.	./.	0/1:2,6:6:0:0,0,0	1/1:2,1:1:3.01:45,3,0	1/1:1,1:1:3.01:45,3,0	./.	./.	1/1:3,3:3:9.03:134,9,0	0/0:1,1:1:0:0,0,0	./.	1/1:0,2:2:3.01:46,3,0	1/1:2,4:4:6.02:76,6,0	./.	1/1:0,3:3:9.03:134,9,0	1/1:7,3:3:3.01:45,3,0	1/1:6,2:2:6.02:89,6,0	./.	1/1:3,1:1:3.01:44,3,0	./.	./.	./.	./.	1/1:4,3:3:6.02:89,6,0	1/1:4,3:3:9.03:134,9,0	1/1:2,1:1:3.01:45,3,0	./.
chr10	100048089	.	TG	T	4092.46	PASS	AB=0.965;AC=52;AF=0.929;AN=56;BaseQRankSum=-3.535;DP=346;FS=0.000;HRun=3;HaplotypeScore=51.3833;InbreedingCoeff=0.3243;MQ=66.17;MQ0=14;MQRankSum=0.617;QD=13.92;ReadPosRankSum=-0.283;VQSLOD=2.2260;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:8:8.67:146,0,9	1/1:6,0:6:17.93:140,18,0	0/0:50,0:11:9.95:0,10,121	0/1:37,3:12:51.19:97,0,51	1/1:14,1:15:41.84:335,42,0	1/1:8,0:8:23.17:176,23,0	1/1:8,0:8:14.95:119,15,0	1/1:13,0:13:31.03:240,31,0	1/1:9,0:9:25.14:191,25,0	1/1:13,0:13:28.26:214,28,0	1/1:17,0:17:38.32:284,38,0	1/1:10,0:10:26.08:194,26,0	1/1:11,0:11:14.96:120,15,0	1/1:7,0:7:17.14:125,17,0	1/1:9,0:9:17.86:133,18,0	1/1:11,0:11:25.19:195,25,0	1/1:13,0:13:18.86:123,19,0	1/1:3,0:3:8.96:67,9,0	1/1:16,0:16:34.91:249,35,0	1/1:7,0:7:9.83:69,10,0	1/1:2,0:2:5.99:51,6,0	1/1:5,0:5:14.02:104,14,0	1/1:15,0:15:21.98:148,22,0	1/1:3,0:3:5.99:48,6,0	1/1:11,0:11:29.65:227,30,0	1/1:8,0:8:13.24:107,13,0	1/1:10,0:10:18.42:118,18,0	1/1:16,0:15:8.94:73,9,0
chr10	100049632	.	T	TTA	52.27	PASS	AB=0.867;AC=5;AF=0.093;AN=54;BaseQRankSum=1.312;DP=215;FS=3.284;HRun=0;HaplotypeScore=35.8520;InbreedingCoeff=0.1241;MQ=72.42;MQ0=1;MQRankSum=0.006;QD=2.27;ReadPosRankSum=-1.946;VQSLOD=0.9326;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:13.06:0,13,51	0/0:1,0:1:3.01:0,3,46	0/0:5,0:4:9.02:0,9,93	0/0:10,0:8:16.29:0,16,200	0/0:11,0:11:30.09:0,30,440	0/0:7,0:7:21.07:0,21,320	0/0:3,0:3:9.01:0,9,115	0/0:12,0:12:0.07:0,0,100	1/1:1,0:1:2.98:22,3,0	0/0:7,0:7:18.05:0,18,241	0/0:9,0:9:27.08:0,27,377	0/0:6,0:6:18.06:0,18,276	0/0:13,0:13:39.10:0,39,536	0/0:5,0:5:12.04:0,12,184	0/0:6,0:6:15.05:0,15,230	0/0:7,0:7:21.05:0,21,281	0/0:20,0:20:57.17:0,57,829	0/1:2,4:6:18.53:116,0,19	0/1:11,0:11:3.85:4,0,89	0/1:5,0:5:10.15:10,0,60	0/0:4,0:4:5.31:0,5,38	./.	0/0:5,0:5:15.05:0,15,230	0/0:8,0:8:24.05:0,24,304	0/0:15,0:14:42.14:0,42,643	0/0:1,0:1:2.90:0,3,16	0/0:12,0:12:35.54:0,36,240	0/0:12,0:12:32.58:0,33,217
chr10	100051113	.	TG	T	1819.27	PASS	AB=0.958;AC=44;AF=0.815;AN=54;BaseQRankSum=-0.465;DP=368;FS=8.044;HRun=12;HaplotypeScore=67.8800;InbreedingCoeff=0.4564;MQ=71.39;MQ0=0;MQRankSum=-2.196;QD=5.51;ReadPosRankSum=4.520;VQSLOD=1.5511;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:21.22:63,21,0	1/1:2,3:5:8.96:70,9,0	0/0:7,0:6:9.89:0,10,85	0/0:13,0:12:6.67:0,7,79	1/1:7,7:15:10.98:75,11,0	1/1:5,7:12:17.93:139,18,0	1/1:4,9:14:28.93:214,29,0	1/1:24,0:24:20.47:59,20,0	1/1:17,0:17:26.26:76,26,0	0/0:7,0:7:2.99:0,3,24	1/1:6,2:8:2.99:23,3,0	0/1:9,1:11:17.85:18,0,37	1/1:6,7:13:17.89:139,18,0	0/0:7,0:7:3:0,3,25	1/1:4,13:17:35.77:278,36,0	1/1:7,9:17:25.93:191,26,0	1/1:10,10:22:35.70:249,36,0	1/1:11,0:11:8.13:23,8,0	1/1:15,0:15:10.57:30,11,0	1/1:16,0:16:7.94:23,8,0	1/1:16,0:16:5.36:16,5,0	./.	1/1:10,0:11:1.98:6,2,0	1/1:3,1:4:2.95:23,3,0	0/1:8,0:8:17.15:17,0,29	1/1:23,0:23:31.19:88,31,0	1/1:28,0:28:39.97:125,40,0	1/1:3,0:3:6.11:18,6,0
chr10	100051121	.	GGGGGA	G	3493.17	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=8.360;DP=370;FS=15.570;HRun=0;HaplotypeScore=85.6597;InbreedingCoeff=0.7374;MQ=74.30;MQ0=0;MQRankSum=-2.794;QD=20.08;ReadPosRankSum=4.570;VQSLOD=2.0806;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:38.17:744,38,0	0/0:5,0:5:15.05:0,15,269	0/0:9,0:8:19.99:0,20,378	0/0:12,0:11:2.40:0,2,319	0/0:15,0:15:41.92:0,42,518	0/0:13,0:13:36.09:0,36,599	0/0:17,0:17:42.14:0,42,764	1/1:24,0:24:49.77:395,50,0	1/1:0,16:16:39.13:780,39,0	0/0:3,0:3:6.02:0,6,147	0/0:9,0:9:14.19:0,14,269	0/0:10,0:10:24.07:0,24,461	0/0:15,0:15:38.79:0,39,661	0/0:4,0:4:9.02:0,9,159	0/0:18,0:18:48.62:0,49,902	0/0:18,0:18:45.12:0,45,724	0/0:19,0:19:54.18:0,54,1002	1/1:0,10:10:15:263,15,0	0/1:15,0:15:49.45:141,0,49	1/1:16,0:16:29.25:217,29,0	0/1:15,0:15:21:32,0,21	0/0:2,0:2:3.01:0,3,51	0/0:6,0:6:15.05:0,15,278	0/0:6,0:6:17.96:0,18,262	0/0:15,0:15:39.11:0,39,669	1/1:24,1:25:17.08:410,17,0	1/1:26,2:28:52.30:452,52,0	1/1:3,0:3:8.90:60,9,0
chr10	100051122	.	GGGGA	G	4925.61	PASS	AB=0.560;AC=19;AF=0.339;AN=56;BaseQRankSum=4.314;DP=370;FS=22.837;HRun=0;HaplotypeScore=74.1737;InbreedingCoeff=0.8482;MQ=73.39;MQ0=0;MQRankSum=-2.644;QD=29.49;ReadPosRankSum=4.169;VQSLOD=2.4819;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:38.54:415,39,0	0/0:5,0:5:15.05:0,15,207	0/0:9,0:8:23.72:0,24,339	0/0:11,0:10:13.28:0,13,264	0/0:17,0:17:47.86:0,48,483	0/0:14,0:14:39.08:0,39,527	0/0:17,0:17:42.11:0,42,588	1/1:1,22:23:66.01:865,66,0	1/1:16,0:16:39.09:424,39,0	0/0:3,0:3:6.02:0,6,118	0/0:10,0:10:17.02:0,17,239	0/0:10,0:10:24.06:0,24,378	0/0:17,0:17:44.78:0,45,586	0/0:3,0:3:6.02:0,6,115	0/0:18,0:18:48.61:0,49,687	0/0:18,0:18:45.07:0,45,559	0/0:20,0:20:57.06:0,57,754	1/1:10,0:10:14.99:153,15,0	1/1:1,13:14:28.82:453,29,0	1/1:3,13:16:29.21:328,29,0	0/1:3,11:14:10.39:137,0,10	0/0:2,0:2:3.01:0,3,42	0/0:6,0:6:15.04:0,15,225	0/0:6,0:6:17.96:0,18,211	0/0:17,0:17:45.09:0,45,632	1/1:3,20:23:65.91:933,66,0	1/1:6,20:26:63.19:1054,63,0	1/1:0,3:3:9.03:163,9,0
chr10	100051123	.	GGGAT	G	2416.63	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=10.016;DP=366;FS=34.474;HRun=0;HaplotypeScore=81.1937;InbreedingCoeff=0.9031;MQ=72.44;MQ0=0;MQRankSum=-6.282;QD=14.56;ReadPosRankSum=6.861;VQSLOD=0.9987;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:35.95:212,36,0	0/0:5,0:5:15.05:0,15,230	0/0:8,0:8:23.95:0,24,433	0/0:10,0:9:15.53:0,16,302	0/0:17,0:17:48.14:0,48,684	0/0:15,0:15:42.14:0,42,648	0/0:16,0:16:42.12:0,42,595	1/1:22,1:23:30.97:402,31,0	1/1:16,0:16:38.14:246,38,0	0/0:3,0:3:6.02:0,6,126	0/0:10,0:10:17.18:0,17,299	0/0:10,0:10:24.06:0,24,433	0/0:17,0:17:45.15:0,45,699	0/0:3,0:3:6.02:0,6,128	0/0:18,0:18:45.06:0,45,625	0/0:16,0:16:39.11:0,39,546	0/0:20,0:20:54.08:0,54,757	1/1:10,0:10:11.74:71,12,0	1/1:14,0:14:13.69:234,14,0	1/1:15,1:16:11.48:133,11,0	1/1:13,0:13:9.02:110,9,0	0/0:2,0:2:3.01:0,3,53	0/0:6,0:6:15.03:0,15,257	0/0:6,0:6:18.06:0,18,301	0/0:17,0:17:45.14:0,45,764	1/1:22,0:23:41.87:455,42,0	1/1:24,2:26:62.73:672,63,0	1/1:3,0:3:9.02:92,9,0
chr10	100051703	.	T	TG	687.94	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.174;DP=700;FS=0.000;HRun=5;HaplotypeScore=65.8868;InbreedingCoeff=0.9979;MQ=80.54;MQ0=0;MQRankSum=-2.810;QD=25.48;ReadPosRankSum=0.744;VQSLOD=2.6893;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:60.19:783,60,0	0/0:9,0:9:24.05:0,24,252	0/0:25,0:25:63.08:0,63,640	0/0:31,0:29:53.23:0,53,592	0/0:27,0:27:81.19:0,81,862	0/0:30,0:30:90.22:0,90,960	0/0:23,0:23:66.17:0,66,709	0/0:28,0:28:72.16:0,72,756	0/0:22,0:22:63.14:0,63,669	0/0:32,0:32:93.23:0,93,999	0/0:22,0:22:63.15:0,63,671	0/0:25,0:25:69.16:0,69,733	0/0:27,0:27:66.16:0,66,709	0/0:23,0:23:63.16:0,63,677	0/0:28,0:28:84.20:0,84,894	0/0:25,0:25:72.15:0,72,758	0/0:29,0:29:81.16:0,81,850	0/0:21,0:21:54.13:0,54,578	0/0:28,0:28:66.15:0,66,702	0/0:29,0:29:87.20:0,87,927	0/0:20,0:20:60.13:0,60,635	0/0:15,0:15:45.11:0,45,478	0/0:26,0:26:72.18:0,72,774	0/0:31,0:31:78.19:0,78,838	0/0:22,0:22:60.15:0,60,645	0/0:30,0:30:90.23:0,90,967	0/0:28,0:28:84.21:0,84,902	0/0:17,0:17:42.10:0,42,451
chr10	100053055	.	GA	G	7428.58	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.106;DP=730;FS=2.888;HRun=7;HaplotypeScore=68.1417;InbreedingCoeff=1.0000;MQ=77.69;MQ0=1;MQRankSum=-1.446;QD=26.53;ReadPosRankSum=1.271;VQSLOD=5.7057;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,35:39:87.20:888,87,0	0/0:18,0:18:54.15:0,54,662	0/0:20,0:20:51.15:0,51,621	0/0:15,0:15:39.12:0,39,487	0/0:38,0:38:99:0,102,1269	0/0:32,0:32:84.27:0,84,1057	0/0:21,0:21:51.16:0,51,641	1/1:5,29:34:87.20:887,87,0	1/1:2,26:28:72.16:735,72,0	0/0:30,0:30:84.23:0,84,1030	0/0:19,0:19:51.15:0,51,629	0/0:24,0:24:66.21:0,66,830	0/0:23,0:23:60.19:0,60,750	0/0:24,0:24:63.19:0,63,778	0/0:31,0:31:87.28:0,87,1094	0/0:26,0:25:69.22:0,69,867	0/0:24,0:24:63.20:0,63,792	1/1:0,12:12:36.08:367,36,0	1/1:2,24:26:72.15:728,72,0	1/1:1,32:33:87.19:887,87,0	1/1:1,27:28:72.16:735,72,0	0/0:25,0:25:63.19:0,63,779	0/0:25,0:25:75.24:0,75,940	0/0:32,0:32:87.25:0,87,1065	0/0:23,0:23:66.20:0,66,817	1/1:3,27:29:75.16:765,75,0	1/1:2,29:31:84.19:857,84,0	1/1:1,18:19:57.13:580,57,0
chr10	100053160	.	T	TA	9484.70	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-15.596;DP=653;FS=0.963;HRun=3;HaplotypeScore=59.4967;InbreedingCoeff=0.9948;MQ=91.88;MQ0=0;MQRankSum=-2.451;QD=37.64;ReadPosRankSum=-0.038;VQSLOD=5.0847;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:63.21:878,63,0	0/0:4,0:4:12.04:0,12,144	0/0:31,0:31:83.27:0,83,960	0/0:23,0:23:57.16:0,57,662	0/0:26,0:26:75.21:0,75,886	0/0:21,0:21:54.16:0,54,648	0/0:21,0:21:60.17:0,60,709	1/1:6,32:37:96.27:1288,96,0	1/1:1,25:26:72.24:1008,72,0	0/0:24,0:24:72.22:0,72,864	0/0:20,0:20:60.18:0,60,720	0/0:21,0:21:63.19:0,63,755	0/0:35,0:35:99:0,102,1224	0/0:23,0:23:66.19:0,66,780	0/0:24,0:24:66.20:0,66,792	0/0:27,0:27:75.23:0,75,899	0/0:21,1:22:21.18:0,21,678	1/1:0,17:17:45.15:630,45,0	1/1:1,24:25:72.17:946,72,0	1/1:1,30:31:87.29:1218,87,0	1/1:0,22:22:66.22:924,66,0	0/0:24,0:24:66.18:0,66,778	0/0:18,0:18:54.17:0,54,648	0/0:16,0:16:45.14:0,45,540	0/0:21,0:21:63.19:0,63,755	1/1:0,25:25:72.24:1009,72,0	1/1:2,26:28:84.27:1157,84,0	1/1:3,9:12:33.08:427,33,0
chr10	100053417	.	ATTT	A	5800.95	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.703;DP=627;FS=5.621;HRun=13;HaplotypeScore=97.8891;InbreedingCoeff=0.9982;MQ=66.43;MQ0=1;MQRankSum=-4.034;QD=25.00;ReadPosRankSum=4.804;VQSLOD=4.1293;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:21:47.03:285,47,0	0/0:10,0:13:32.05:0,32,414	0/0:13,0:11:24.05:0,24,330	0/0:12,0:9:18.02:0,18,251	0/0:29,0:29:78.27:0,78,1398	0/0:28,0:30:81.24:0,81,1461	0/0:15,0:15:33.10:0,33,595	1/1:5,20:25:57.10:679,57,0	1/1:3,0:21:47.06:285,47,0	0/0:28,0:29:72.24:0,72,1324	0/0:21,0:21:60.21:0,60,1109	0/0:25,0:26:75.22:0,75,1269	0/0:26,0:28:72.22:0,72,1299	0/0:11,0:11:33.11:0,33,598	0/0:20,0:20:57.20:0,57,1066	0/0:24,0:25:72.21:0,72,1254	0/0:26,0:25:69.21:0,69,1228	1/1:2,0:14:32.16:190,32,0	1/1:3,22:25:63.12:751,63,0	1/1:6,28:34:78.14:949,78,0	1/1:2,16:18:40.42:508,40,0	0/0:29,0:30:84.24:0,84,1497	0/0:25,0:27:78.22:0,78,1403	0/0:19,0:19:48.16:0,48,918	0/0:19,0:21:54.18:0,54,973	1/1:3,28:31:29.52:949,30,0	1/1:3,22:25:60.12:730,60,0	1/1:5,13:18:39.08:474,39,0
chr10	100054909	.	GGA	G	6758.01	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.022;DP=731;FS=7.566;HRun=0;HaplotypeScore=123.8168;InbreedingCoeff=0.9646;MQ=87.69;MQ0=4;MQRankSum=-4.543;QD=27.58;ReadPosRankSum=2.060;VQSLOD=5.8769;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:45,0:45:99:1296,105,0	0/0:8,0:8:18.06:0,18,297	0/0:51,0:39:26.99:0,27,747	0/0:69,0:52:77.12:0,77,1083	0/0:16,0:16:36.12:0,36,588	0/0:14,1:14:1.59:0,2,557	0/0:28,0:28:72.22:0,72,1159	1/1:31,0:31:57.17:698,57,0	1/1:27,0:27:66.17:805,66,0	0/0:30,0:30:75.26:0,75,1239	0/0:17,0:17:42.14:0,42,678	0/0:31,1:32:46.74:0,47,1275	0/0:18,0:18:41.35:0,41,651	0/0:27,1:28:28.69:0,29,996	0/0:23,0:23:63.22:0,63,1031	0/0:26,1:27:37.72:0,38,1148	0/0:31,1:32:43.75:0,44,1251	1/1:23,0:23:48.15:597,48,0	1/1:14,0:14:33.10:411,33,0	1/1:23,0:23:57.18:710,57,0	1/1:26,0:26:48.12:598,48,0	0/0:20,0:20:42.14:0,42,691	0/0:17,0:17:42.10:0,42,658	0/0:30,0:30:78.27:0,78,1288	0/0:24,0:24:69.24:0,69,1125	1/1:18,0:18:48.15:596,48,0	1/1:30,0:30:69.22:861,69,0	1/1:8,0:8:15.05:187,15,0
chr10	100054917	.	AG	A	3537.86	PASS	AB=0.594;AC=18;AF=0.321;AN=56;BaseQRankSum=16.363;DP=735;FS=1.736;HRun=1;HaplotypeScore=123.7506;InbreedingCoeff=0.7680;MQ=85.66;MQ0=4;MQRankSum=-3.612;QD=14.56;ReadPosRankSum=5.464;VQSLOD=3.4875;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,37:47:51.97:710,52,0	0/0:7,0:7:21.07:0,21,336	0/0:54,0:41:99:0,104,1327	0/0:68,0:49:88.45:0,88,1490	0/0:20,0:20:60.20:0,60,893	0/0:18,0:17:48.63:0,49,739	0/0:30,0:30:87.27:0,87,1324	0/1:10,18:28:37.51:299,0,38	1/1:8,21:29:4.43:412,4,0	0/0:30,0:30:90.30:0,90,1389	0/0:18,0:18:51.17:0,51,787	0/0:35,0:35:99:0,103,1548	0/0:17,0:17:51.17:0,51,768	0/0:25,0:25:72.69:0,73,1107	0/0:25,0:25:72.24:0,72,1121	0/0:29,0:29:84.76:0,85,1304	0/0:29,0:29:84.76:0,85,1324	1/1:4,17:21:34.58:320,35,0	1/1:2,11:13:2.43:189,2,0	1/1:6,17:23:34.73:384,35,0	1/1:5,19:24:8.11:334,8,0	0/0:17,0:17:51.16:0,51,772	0/0:15,0:15:45.15:0,45,708	0/0:31,0:31:93.31:0,93,1446	0/0:24,0:24:72.25:0,72,1151	1/1:4,15:19:28.05:341,28,0	0/1:9,24:33:14.47:439,0,14	1/1:1,5:6:14.89:108,15,0
chr10	100054919	.	AG	A	3496.77	PASS	AB=0.604;AC=18;AF=0.321;AN=56;BaseQRankSum=16.600;DP=730;FS=7.712;HRun=1;HaplotypeScore=121.2896;InbreedingCoeff=0.8011;MQ=84.62;MQ0=4;MQRankSum=-2.486;QD=14.39;ReadPosRankSum=5.704;VQSLOD=3.0775;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,37:46:52.37:673,52,0	0/0:7,0:7:21.07:0,21,336	0/0:52,0:39:99:0,107,1355	0/0:64,0:45:67.13:0,67,1327	0/0:19,0:19:57.19:0,57,854	0/0:19,0:18:51.63:0,52,763	0/0:31,0:31:93.27:0,93,1385	0/1:11,17:28:32.15:323,0,32	1/1:7,21:28:14.24:399,14,0	0/0:30,0:30:90.30:0,90,1400	0/0:17,0:17:51.17:0,51,787	0/0:36,0:36:99:0,106,1599	0/0:17,0:17:51.17:0,51,768	0/0:24,0:24:69.71:0,70,1084	0/0:25,0:25:75.25:0,75,1158	0/0:29,0:29:84.76:0,85,1304	0/0:29,0:29:84.74:0,85,1310	1/1:4,17:21:38.02:357,38,0	1/1:2,11:13:7.06:194,7,0	1/1:7,17:24:37.26:403,37,0	1/1:6,19:25:5.24:315,5,0	0/0:16,0:16:48.16:0,48,747	0/0:15,0:15:45.15:0,45,709	0/0:32,0:32:96.32:0,96,1482	0/0:25,0:25:75.24:0,75,1175	1/1:3,15:18:29.97:318,30,0	0/1:10,24:34:11.24:407,0,11	1/1:1,5:6:14.89:108,15,0
chr10	100056059	.	TG	T	4317.06	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=11.166;DP=613;FS=3.395;HRun=8;HaplotypeScore=69.1511;InbreedingCoeff=0.9968;MQ=80.65;MQ0=0;MQRankSum=-3.343;QD=19.89;ReadPosRankSum=2.189;VQSLOD=5.0940;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,22:29:69.10:666,69,0	0/0:10,0:10:27.04:0,27,284	0/0:21,1:22:20.99:0,21,320	0/0:14,0:15:34.66:0,35,342	0/0:19,0:19:51.14:0,51,604	0/0:26,0:26:69.19:0,69,813	0/0:20,0:20:54.15:0,54,640	1/1:6,30:36:84.12:810,84,0	1/1:0,0:22:38.64:113,39,0	0/0:21,0:21:45.14:0,45,543	0/0:19,0:20:35.98:0,36,413	0/0:29,0:29:81.24:0,81,966	0/0:27,0:27:72.02:0,72,822	0/0:25,1:26:46.24:0,46,827	0/0:28,0:28:63.19:0,63,761	0/0:26,0:27:68.25:0,68,843	0/0:24,0:23:72.22:0,72,866	1/1:1,0:12:22.41:66,22,0	1/1:3,15:17:43.70:411,44,0	1/1:4,19:23:51.07:492,51,0	1/1:3,16:19:39.06:377,39,0	0/0:21,0:21:54.15:0,54,639	0/0:16,0:16:33.10:0,33,393	0/0:23,0:23:63.17:0,63,737	0/0:22,0:22:66.19:0,66,785	1/1:8,16:24:17.84:456,18,0	1/1:3,24:27:75.11:724,75,0	1/1:0,7:7:21.03:203,21,0
chr10	100056908	.	TTCTA	T	5675.54	PASS	AB=0.724;AC=41;AF=0.820;AN=50;BaseQRankSum=5.111;DP=612;FS=0.000;HRun=0;HaplotypeScore=118.7082;InbreedingCoeff=0.6754;MQ=64.67;MQ0=4;MQRankSum=-1.054;QD=12.02;ReadPosRankSum=4.105;VQSLOD=4.1182;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:24:1.11:0,1,3	1/1:6,0:11:9.01:84,9,0	./.	./.	1/1:19,0:31:9.84:51,10,0	1/1:13,12:25:30.10:457,30,0	0/0:17,0:16:9.03:0,9,207	./.	1/1:11,12:23:36.12:548,36,0	1/1:8,15:22:42.12:616,42,0	1/1:12,10:22:33.11:496,33,0	1/1:16,0:27:19.60:138,20,0	1/1:10,16:26:42.14:640,42,0	1/1:9,12:21:27.09:411,27,0	1/1:15,0:29:22.55:153,23,0	0/0:19,0:19:18.06:0,18,416	1/1:10,0:18:12.01:112,12,0	0/0:20,0:20:39.08:0,39,779	1/1:17,0:17:3:28,3,0	1/1:14,8:22:21.07:305,21,0	1/1:9,0:9:5.97:48,6,0	1/1:8,0:11:4.82:16,5,0	1/1:17,0:32:22.45:96,22,0	1/1:7,0:12:5.90:56,6,0	1/1:19,25:43:66.22:1005,66,0	1/1:10,0:19:21.87:169,22,0	1/1:15,0:26:20.39:176,20,0	0/1:13,0:21:2.65:72,0,3
chr10	100059527	.	CATCT	C	1925.11	PASS	AB=0.711;AC=11;AF=0.212;AN=52;BaseQRankSum=6.943;DP=691;FS=2.705;HRun=0;HaplotypeScore=115.7520;InbreedingCoeff=0.7626;MQ=65.96;MQ0=2;MQRankSum=0.931;QD=11.67;ReadPosRankSum=0.781;VQSLOD=3.3956;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:35:1.63:0,2,858	0/0:5,0:7:6.02:0,6,123	./.	./.	1/1:11,0:29:18.16:150,18,0	1/1:12,17:29:30.10:465,30,0	0/0:15,0:15:18.06:0,18,370	0/0:38,0:37:17.99:0,18,207	0/0:11,0:23:33.11:0,33,573	0/0:31,0:31:48.15:0,48,1011	0/0:35,0:35:45.15:0,45,946	0/0:11,0:18:12.04:0,12,225	1/1:16,16:32:30.10:465,30,0	1/1:10,13:23:21.07:325,21,0	0/0:13,0:31:33.10:0,33,548	1/1:12,13:24:27.09:418,27,0	0/0:16,0:19:2.98:0,3,22	0/0:9,0:16:9.03:0,9,177	0/0:16,0:16:24.07:0,24,475	0/0:39,0:39:60.19:0,60,1318	0/0:13,0:13:27.09:0,27,626	0/1:16,11:27:46.52:272,0,47	0/0:24,0:24:39.12:0,39,822	0/0:3,0:9:14.98:0,15,227	0/0:25,0:44:36.08:0,36,513	0/0:29,0:29:54.18:0,54,1182	0/0:39,2:41:22.75:0,23,1404	0/0:13,0:13:30.10:0,30,702
chr10	100062520	.	C	CTGTGTGTGTG	2391.45	PASS	AB=0.917;AC=17;AF=0.315;AN=54;BaseQRankSum=4.697;DP=661;FS=4.396;HRun=0;HaplotypeScore=206.6760;InbreedingCoeff=0.7641;MQ=63.45;MQ0=10;MQRankSum=-7.298;QD=17.98;ReadPosRankSum=-4.229;VQSLOD=1.8984;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:4:6.02:0,6,184	0/0:34,0:19:18.41:0,18,263	0/0:36,0:17:24.70:0,25,465	0/0:24,0:24:42.14:0,42,1106	0/0:23,0:24:45.06:0,45,1274	0/0:34,0:33:24.92:0,25,1417	1/1:24,0:21:12.03:270,12,0	1/1:10,0:10:0.89:2,1,0	0/0:33,0:33:66.19:0,66,1726	0/0:26,0:26:48.62:0,49,1215	0/0:24,0:24:51.62:0,52,1155	0/0:28,0:28:39.61:0,40,1156	0/0:22,0:22:42.13:0,42,1131	0/0:33,0:34:84.27:0,84,2296	0/0:30,0:30:69.24:0,69,2015	0/0:35,0:34:67.21:0,67,1810	1/1:6,1:7:3.01:138,3,0	1/1:9,4:12:18.05:498,18,0	1/1:20,0:22:15.05:478,15,0	1/1:11,0:11:6.01:64,6,0	0/0:33,0:33:76.11:0,76,2022	0/0:17,0:17:36.10:0,36,1006	0/0:47,0:46:75:0,75,2709	0/0:21,0:21:54.18:0,54,1581	0/1:20,0:22:64.32:584,0,64	1/1:12,0:14:12.03:385,12,0	1/1:4,4:8:3.01:148,3,0
chr10	100062535	.	TGA	T	295.31	PASS	AB=0.944;AC=17;AF=0.386;AN=44;BaseQRankSum=2.737;DP=621;FS=7.062;HRun=0;HaplotypeScore=118.2275;InbreedingCoeff=-0.4272;MQ=52.60;MQ0=13;MQRankSum=0.358;QD=0.74;ReadPosRankSum=-1.154;VQSLOD=1.7293;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,0:3:2.99:24,3,0	./.	./.	0/1:20,0:21:13.15:13,0,87	0/1:24,1:25:51.60:52,0,203	0/0:32,1:31:26.71:0,27,320	0/0:15,0:12:2.84:0,3,14	./.	0/1:35,0:34:43.23:43,0,255	0/0:18,0:27:8.80:0,9,75	0/1:24,1:26:58.05:58,0,238	0/0:28,6:34:2.67:0,3,270	0/1:19,1:21:45.04:45,0,221	0/1:37,0:38:16.95:17,0,278	0/1:30,1:31:2.86:3,0,430	0/1:26,7:32:26.13:26,0,405	0/1:6,0:6:6.70:12,0,7	0/1:7,0:7:0.93:12,0,1	./.	./.	0/1:30,7:37:3.65:4,0,248	0/1:22,0:22:23.67:24,0,40	0/1:49,1:49:18.18:18,0,555	0/1:24,0:25:16.73:60,0,17	0/1:16,0:17:10.07:10,0,75	0/0:10,0:11:3.28:0,3,10	0/0:3,0:3:2.22:0,2,7
chr10	100062640	.	CAGAGAGACACAGAGAA	C	1274.78	PASS	AB=0.946;AC=8;AF=0.143;AN=56;BaseQRankSum=5.434;DP=828;FS=9.248;HRun=0;HaplotypeScore=338.2686;InbreedingCoeff=-0.1674;MQ=63.68;MQ0=52;MQRankSum=-3.873;QD=6.34;ReadPosRankSum=-1.862;VQSLOD=0.6397;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:44.68:0,45,898	0/0:6,0:6:18.06:0,18,893	0/0:68,0:26:76.83:0,77,2265	0/0:117,0:45:99:0,103,2598	0/0:14,0:14:39.12:0,39,1762	0/0:29,0:29:81.26:0,81,4117	0/0:29,0:29:75.26:0,75,3520	0/1:32,10:39:99:252,0,2733	0/1:22,0:22:99:212,0,887	0/0:34,0:34:87.29:0,87,4368	0/0:16,0:16:48.15:0,48,2273	0/0:21,0:21:60.21:0,60,2764	0/0:36,0:36:98.91:0,99,4647	0/0:17,0:17:48.12:0,48,2081	0/0:29,0:29:81.28:0,81,4653	0/0:26,0:26:75.13:0,75,3963	0/0:26,0:26:61.20:0,61,3420	0/1:19,0:19:55.80:56,0,1261	0/1:11,5:13:99:123,0,1011	0/1:23,0:23:99:110,0,1542	0/0:35,0:34:17.66:0,18,2452	0/0:20,0:19:57.18:0,57,2513	0/0:17,0:17:48.16:0,48,2241	0/0:39,0:39:96.43:0,96,5353	0/0:16,0:16:48.16:0,48,2470	0/1:40,0:40:99:365,0,2878	0/1:31,0:30:99:268,0,2364	0/1:8,0:8:24.89:25,0,613
chr10	100062853	.	AT	A	2667.64	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.651;DP=654;FS=0.893;HRun=4;HaplotypeScore=63.7705;InbreedingCoeff=0.9227;MQ=70.24;MQ0=1;MQRankSum=1.417;QD=29.64;ReadPosRankSum=-3.028;VQSLOD=2.3730;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.25:0,78,1069	0/0:5,0:5:15.02:0,15,189	0/0:25,0:18:20.63:0,21,455	0/0:14,0:11:1.79:0,2,101	0/0:16,0:16:48.15:0,48,651	0/0:37,0:37:99:0,105,1385	0/0:15,0:15:42.12:0,42,555	1/1:3,38:41:99:1261,117,0	0/0:24,0:24:66.17:0,66,853	0/0:38,0:38:99:0,105,1388	0/0:34,0:34:90.23:0,90,1154	0/0:19,0:19:57.14:0,57,730	0/0:16,0:16:45.12:0,45,580	0/0:14,0:14:42.12:0,42,556	0/0:22,0:22:60.18:0,60,806	0/0:21,0:21:55.05:0,55,738	0/0:26,0:26:69.17:0,69,896	0/0:14,0:14:36.11:0,36,486	0/0:23,0:23:58.41:0,58,749	0/0:27,0:27:72.17:0,72,933	0/0:15,0:15:39.10:0,39,510	0/0:21,0:21:54.13:0,54,686	0/0:26,0:26:72.09:0,72,917	0/0:18,0:18:51.17:0,51,711	0/0:36,0:36:93.26:0,93,1231	1/1:1,37:38:99:1226,105,0	0/0:30,0:30:81.21:0,81,1088	1/1:1,10:11:27.08:323,27,0
chr10	100063715	.	AGG	A	2991.54	PASS	AB=0.552;AC=23;AF=0.411;AN=56;BaseQRankSum=8.203;DP=495;FS=38.221;HRun=12;HaplotypeScore=76.6018;InbreedingCoeff=0.9105;MQ=72.89;MQ0=2;MQRankSum=-2.551;QD=12.95;ReadPosRankSum=5.982;VQSLOD=-0.4964;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:39:87.82:383,88,0	0/0:7,0:7:11.99:0,12,150	0/0:18,0:15:15.51:0,16,227	0/0:12,0:11:9.60:0,10,101	0/1:3,1:16:6.48:6,0,62	0/0:16,0:16:24.50:0,24,280	1/1:6,1:20:33.17:161,33,0	1/1:7,0:20:18.03:125,18,0	1/1:5,14:20:41.82:408,42,0	0/0:13,0:13:17.52:0,18,191	0/0:10,0:11:20.54:0,21,253	0/0:10,0:13:28.59:0,29,333	0/0:19,0:20:32.57:0,33,404	0/0:16,0:19:32.07:0,32,396	0/0:9,0:12:23.04:0,23,265	0/0:16,0:20:20.56:0,21,276	0/0:18,0:18:36.10:0,36,512	1/1:1,16:18:42.07:427,42,0	1/1:5,10:15:33.02:322,33,0	1/1:14,10:24:27:274,27,0	1/1:3,12:15:39.08:397,39,0	0/0:18,0:18:21.07:0,21,312	0/0:18,0:18:27.07:0,27,359	0/0:25,0:27:44.55:0,45,541	0/0:18,0:19:23.55:0,24,290	1/1:1,0:19:44.44:193,44,0	1/1:4,15:20:50.58:481,51,0	1/1:1,0:4:8.23:36,8,0
chr10	100064262	.	G	GA	8599.94	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-12.709;DP=682;FS=13.878;HRun=7;HaplotypeScore=63.6820;InbreedingCoeff=0.9988;MQ=86.59;MQ0=0;MQRankSum=-3.485;QD=30.18;ReadPosRankSum=-0.529;VQSLOD=3.8596;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,30:35:79.49:946,79,0	0/0:8,0:8:18.02:0,18,174	0/0:22,0:22:44.25:0,44,458	0/0:23,0:23:51.03:0,51,481	0/0:22,0:22:57.08:0,57,550	0/0:23,0:23:66.11:0,66,637	1/1:5,16:21:48.15:580,48,0	1/1:3,31:34:90.28:1087,90,0	1/1:3,28:31:75.23:906,75,0	0/0:27,0:27:57.07:0,57,550	0/0:17,0:17:45.06:0,45,434	0/0:30,0:30:78.06:0,78,743	0/0:29,0:29:78.12:0,78,753	0/0:18,0:18:54.08:0,54,516	0/0:31,0:31:84.13:0,84,811	0/0:29,0:29:78.11:0,78,748	0/0:27,0:27:75.09:0,75,716	1/1:0,14:14:42.13:507,42,0	1/1:6,18:24:54.15:641,54,0	1/1:2,22:24:63.15:745,63,0	1/1:1,25:26:66.20:797,66,0	0/0:22,0:22:54.06:0,54,515	0/0:22,0:22:60.05:0,60,566	0/0:29,0:29:78.12:0,78,753	0/0:18,0:18:51.08:0,51,493	1/1:3,18:21:54.17:652,54,0	1/1:2,30:32:75.06:905,75,0	1/1:0,23:23:69.21:834,69,0
chr10	100066532	.	A	AC	734.45	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=6.199;DP=593;FS=0.869;HRun=4;HaplotypeScore=79.9758;InbreedingCoeff=0.9938;MQ=43.95;MQ0=46;MQRankSum=-1.414;QD=26.23;ReadPosRankSum=-3.090;VQSLOD=1.6732;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:25:62.97:0,63,653	0/0:7,0:7:21.06:0,21,238	./.	./.	0/0:39,0:39:77.99:0,78,834	0/0:24,0:24:48.07:0,48,528	1/1:2,26:28:62.81:829,63,0	0/0:25,0:17:48.14:0,48,544	0/0:20,0:19:41.87:0,42,460	0/0:18,0:18:51.10:0,51,564	0/0:23,0:23:42.12:0,42,476	0/0:26,0:25:69.06:0,69,741	0/0:19,0:19:42.01:0,42,446	0/0:17,0:15:36.10:0,36,407	0/0:26,0:26:60.10:0,60,664	0/0:20,0:19:45.11:0,45,510	0/0:21,0:21:54.15:0,54,612	0/0:20,0:20:48.14:0,48,544	0/0:15,0:10:27.02:0,27,282	0/0:24,0:23:72.04:0,72,771	0/0:13,0:12:30.03:0,30,316	0/0:21,0:21:45.13:0,45,510	0/0:23,0:23:45:0,45,479	0/0:20,0:19:42.12:0,42,476	0/0:22,0:22:59.64:0,60,617	0/0:31,0:29:84.18:0,84,929	0/0:21,0:21:45.13:0,45,510	0/0:15,0:14:33.04:0,33,359
chr10	100066620	.	GGT	G	1553.93	PASS	AB=0.903;AC=23;AF=0.426;AN=54;BaseQRankSum=4.714;DP=551;FS=8.227;HRun=0;HaplotypeScore=83.4235;InbreedingCoeff=0.3397;MQ=62.73;MQ0=13;MQRankSum=1.260;QD=5.38;ReadPosRankSum=1.628;VQSLOD=2.1249;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:18:11.36:56,11,0	0/0:7,0:7:9.03:0,9,137	0/0:26,0:14:2.81:0,3,43	./.	0/1:14,4:18:57.09:57,0,204	0/1:16,0:16:39.94:40,0,280	0/0:19,1:39:23.71:0,24,547	0/0:36,0:34:29.99:0,30,297	1/1:9,7:17:23.56:209,24,0	0/0:16,0:16:36.12:0,36,528	0/0:6,0:6:3.01:0,3,46	0/1:15,1:16:12.44:12,0,252	0/0:19,0:19:3:0,3,443	0/0:19,1:20:2.61:0,3,446	0/1:27,2:28:12.88:13,0,650	0/1:14,3:17:42.95:43,0,245	0/0:24,0:24:39.59:0,40,562	1/1:13,5:18:11.87:114,12,0	1/1:20,0:17:11.99:120,12,0	1/1:2,6:10:17.72:162,18,0	1/1:11,13:24:10.10:282,10,0	0/1:15,0:15:34.62:35,0,248	0/0:12,0:12:15.05:0,15,219	0/1:28,9:37:99:162,0,669	1/1:9,1:12:11.68:87,12,0	0/0:14,0:19:21.01:0,21,233	1/1:6,12:19:32.79:349,33,0	0/0:9,0:12:15.03:0,15,181
chr10	100066790	.	CA	C	1739.03	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.470;DP=346;FS=2.589;HRun=9;HaplotypeScore=41.1513;InbreedingCoeff=0.9435;MQ=67.40;MQ0=0;MQRankSum=0.056;QD=19.76;ReadPosRankSum=-1.909;VQSLOD=3.0688;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,13:18:28.16:271,28,0	0/0:6,0:6:15.04:0,15,173	0/0:11,0:10:17.41:0,17,176	0/0:7,0:7:12.01:0,12,124	0/0:22,0:22:57.07:0,57,596	0/0:8,0:8:21.06:0,21,242	1/1:3,14:17:48.01:435,48,0	1/1:6,25:31:75.04:686,75,0	0/0:9,0:9:24.07:0,24,277	0/0:10,0:10:27.07:0,27,303	0/0:12,0:12:21.04:0,21,224	0/0:2,0:2:6.02:0,6,69	0/0:14,0:14:27.08:0,27,311	0/0:12,0:12:27.07:0,27,303	0/0:14,0:14:30.06:0,30,333	0/0:7,0:7:15.04:0,15,173	0/0:14,0:14:42.12:0,42,485	0/0:18,0:18:51.15:0,51,589	0/0:10,0:10:15.04:0,15,165	0/0:11,0:11:33.07:0,33,364	0/0:10,0:10:30.09:0,30,346	0/0:9,0:9:27.08:0,27,311	0/0:13,0:13:27.08:0,27,306	0/0:18,0:18:48.14:0,48,554	0/0:8,0:8:21.53:0,22,244	1/1:3,12:15:36.02:329,36,0	0/0:12,1:13:11.65:0,12,388	1/1:1,6:7:21.01:192,21,0
chr10	100066859	.	CA	C	2452.35	PASS	AB=0.533;AC=9;AF=0.161;AN=56;BaseQRankSum=11.205;DP=331;FS=20.016;HRun=2;HaplotypeScore=41.6923;InbreedingCoeff=0.8337;MQ=72.16;MQ0=0;MQRankSum=1.095;QD=31.44;ReadPosRankSum=-3.865;VQSLOD=1.0167;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:14:42.11:522,42,0	0/0:3,0:3:9.03:0,9,135	0/0:5,0:5:8.89:0,9,135	0/0:9,0:9:21.49:0,21,282	0/0:21,0:21:54.18:0,54,808	0/0:10,0:10:27.03:0,27,359	1/1:5,11:16:45.10:536,45,0	1/1:1,30:31:90.20:1092,90,0	0/0:7,0:7:18.06:0,18,270	0/0:13,0:13:36.12:0,36,540	0/0:10,0:10:30.09:0,30,431	0/0:9,0:9:27.09:0,27,405	0/0:10,0:10:30.10:0,30,450	0/0:8,0:8:24.08:0,24,359	0/0:12,0:11:33.11:0,33,493	0/0:9,0:9:27.09:0,27,405	0/0:16,0:16:48.16:0,48,713	0/0:13,0:13:39.11:0,39,553	0/0:13,0:12:36.11:0,36,517	0/0:12,0:11:33.07:0,33,452	0/0:17,0:17:51.17:0,51,764	0/0:12,0:12:36.11:0,36,520	0/0:13,0:13:36.12:0,36,538	0/0:6,0:6:18.06:0,18,270	0/0:10,0:10:27.07:0,27,368	0/1:1,7:8:20.91:234,0,21	0/0:15,0:15:42.12:0,42,606	1/1:3,6:9:18.06:231,18,0
chr10	100066922	.	GATTTATT	G	1068.92	PASS	AB=0.900;AC=10;AF=0.185;AN=54;BaseQRankSum=6.872;DP=239;FS=12.017;HRun=0;HaplotypeScore=57.8113;InbreedingCoeff=0.4502;MQ=62.61;MQ0=3;MQRankSum=-2.870;QD=16.20;ReadPosRankSum=-0.685;VQSLOD=0.8340;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:10:24.08:318,24,0	0/0:6,0:6:18.06:0,18,393	0/0:30,0:18:36.11:0,36,484	0/0:14,0:8:14.56:0,15,195	0/0:8,0:8:24.08:0,24,392	0/0:7,0:7:18.95:0,19,355	1/1:6,0:6:12.04:148,12,0	1/1:22,0:18:42.13:519,42,0	0/0:4,0:4:10.06:0,10,99	0/0:11,0:11:33.02:0,33,683	0/0:5,0:5:12.04:0,12,166	0/0:8,0:8:21.07:0,21,367	0/1:5,0:5:4.82:5,0,95	0/0:6,0:6:18.06:0,18,250	0/0:8,0:8:21.07:0,21,473	0/0:6,0:6:15.02:0,15,287	0/0:15,0:15:39.13:0,39,880	0/0:8,0:8:1.19:0,1,187	0/0:4,0:4:12.04:0,12,165	0/0:5,0:5:12.04:0,12,166	0/0:5,0:5:15.05:0,15,206	0/0:6,0:6:18.06:0,18,248	0/0:6,0:6:18.05:0,18,226	./.	0/0:11,0:11:33.11:0,33,735	0/1:3,0:2:18.82:31,0,19	0/1:11,0:11:23.21:23,0,221	0/1:3,6:9:23.44:179,0,23
chr10	100066923	.	AT	A	925.84	PASS	AB=0.600;AC=9;AF=0.167;AN=54;BaseQRankSum=6.424;DP=234;FS=9.001;HRun=3;HaplotypeScore=32.0204;InbreedingCoeff=0.7811;MQ=62.71;MQ0=3;MQRankSum=-2.590;QD=18.52;ReadPosRankSum=-1.151;VQSLOD=1.9695;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,7:10:23.99:276,24,0	0/0:6,0:6:18.06:0,18,252	0/0:27,0:16:36.12:0,36,486	0/0:14,0:8:14.21:0,14,195	0/0:8,0:8:24.06:0,24,314	0/0:6,1:7:18.01:0,18,235	1/1:1,5:6:12.04:148,12,0	1/1:4,18:18:42.13:519,42,0	0/0:4,0:4:7.93:0,8,95	0/0:11,0:11:33.05:0,33,426	0/0:4,0:4:12.04:0,12,166	0/0:8,0:8:21.07:0,21,291	0/0:5,0:5:11.23:0,11,114	0/0:6,0:6:18.06:0,18,249	0/0:7,0:7:21.07:0,21,293	0/0:6,0:6:15:0,15,170	0/0:14,0:14:38.34:0,38,511	0/0:8,0:8:17.27:0,17,211	0/0:4,0:4:12.04:0,12,165	0/0:5,0:5:12.04:0,12,166	0/0:5,0:5:15.05:0,15,206	0/0:6,0:6:18.06:0,18,248	0/0:6,0:6:18.05:0,18,226	./.	0/0:11,0:11:33.11:0,33,456	0/1:1,2:2:18.82:31,0,19	0/0:11,0:11:24.72:0,25,269	1/1:7,2:9:11.87:109,12,0
chr10	100066924	.	TTTATTA	T	302.10	PASS	AB=1.000;AC=9;AF=0.265;AN=34;BaseQRankSum=3.081;DP=228;FS=1.608;HRun=0;HaplotypeScore=54.1945;InbreedingCoeff=0.4144;MQ=62.98;MQ0=3;MQRankSum=-3.929;QD=7.37;ReadPosRankSum=0.277;VQSLOD=1.6347;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:10:3.01:42,3,0	0/0:6,0:6:6.02:0,6,177	./.	0/0:13,0:8:0:0,0,0	0/0:8,0:8:3.01:0,3,78	0/0:7,0:7:6.91:0,7,165	./.	0/0:21,0:17:0:0,0,0	0/0:4,0:4:0.89:0,1,2	0/0:11,0:11:12.03:0,12,316	./.	0/0:7,0:7:3.01:0,3,96	1/1:3,1:4:3.01:60,3,0	./.	0/0:7,0:7:9.02:0,9,217	0/0:4,0:6:6.02:0,6,130	0/0:14,0:14:17.97:0,18,425	1/1:6,2:8:3.01:60,3,0	./.	./.	./.	./.	./.	./.	0/0:11,0:11:15:0,15,334	./.	1/1:6,5:11:9.03:179,9,0	0/1:8,0:8:33.73:71,0,34
chr10	100067495	.	ATG	A	477.99	PASS	AB=0.908;AC=7;AF=0.125;AN=56;BaseQRankSum=7.120;DP=992;FS=2.548;HRun=0;HaplotypeScore=160.2730;InbreedingCoeff=0.1591;MQ=66.33;MQ0=2;MQRankSum=-1.245;QD=2.44;ReadPosRankSum=0.080;VQSLOD=2.8764;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,3:36:17.27:17,0,169	0/1:11,1:12:4.07:4,0,457	0/0:40,0:30:68.03:0,68,960	0/0:40,1:32:1.71:0,2,487	0/0:36,0:37:56.36:0,56,1352	0/0:41,3:45:40.01:0,40,1653	1/1:10,16:27:42.05:479,42,0	0/0:42,0:42:99:0,108,1595	0/0:38,1:39:44.03:0,44,1186	0/0:42,2:44:42.87:0,43,1663	0/0:21,0:21:54.18:0,54,880	0/0:31,1:33:49.61:0,50,1200	0/0:36,2:38:24.96:0,25,1412	0/0:38,0:38:96.31:0,96,1547	0/0:37,3:40:5.84:0,6,1652	0/0:36,0:36:93.32:0,93,1499	0/0:36,1:38:37.47:0,37,1198	0/0:26,1:27:27.40:0,27,898	0/1:22,3:25:57.68:58,0,516	0/0:37,2:39:9.86:0,10,1107	0/1:67,9:76:22.41:22,0,2280	0/0:31,1:32:45.32:0,45,1213	0/0:25,0:25:75.23:0,75,1180	0/0:43,2:45:74.12:0,74,1640	0/0:34,0:34:90.31:0,90,1466	0/0:26,0:26:63.35:0,63,946	0/0:35,1:36:50.12:0,50,1330	0/1:18,2:20:29.17:29,0,483
chr10	100067512	.	CGTGTAT	C	1153.51	PASS	AB=0.857;AC=7;AF=0.125;AN=56;BaseQRankSum=10.331;DP=1057;FS=2.967;HRun=0;HaplotypeScore=254.9679;InbreedingCoeff=0.5193;MQ=56.91;MQ0=13;MQRankSum=-6.461;QD=7.44;ReadPosRankSum=-0.483;VQSLOD=2.2784;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,30:40:8.74:129,0,9	0/0:15,0:15:45.14:0,45,1241	0/0:59,0:29:31.05:0,31,679	0/0:56,0:25:7.50:0,7,519	0/0:31,0:31:69.24:0,69,2121	0/0:42,0:42:90.29:0,90,2758	1/1:9,16:25:23.59:384,24,0	0/1:46,0:46:44.83:95,0,45	0/0:39,0:39:69.93:0,70,2045	0/0:48,0:48:99:0,117,3262	0/0:19,0:19:51.15:0,51,1459	0/0:36,0:36:92.79:0,93,2359	0/0:36,0:36:87.28:0,87,2564	0/0:41,0:41:84.26:0,84,2390	0/0:48,0:48:99:0,111,3240	0/0:36,0:36:81.28:0,81,2462	0/0:39,0:39:93.25:0,93,2561	0/0:32,0:32:69.24:0,69,1989	0/0:22,0:22:45.13:0,45,1179	0/0:34,0:34:75.26:0,75,2125	0/0:86,0:86:99:0,208,5836	0/0:38,0:38:96.33:0,96,2713	0/0:27,0:27:72.25:0,72,2162	0/0:43,0:43:99:0,105,3386	0/0:39,0:39:90.31:0,90,2825	0/1:24,0:24:99:260,0,257	0/0:36,0:36:96.31:0,96,2653	1/1:20,0:20:31.35:428,31,0
chr10	100067517	.	ATGTGTATGTGTATGTG	A	4861.17	PASS	AB=0.833;AC=5;AF=0.089;AN=56;BaseQRankSum=10.228;DP=1075;FS=0.479;HRun=0;HaplotypeScore=442.5754;InbreedingCoeff=0.7741;MQ=56.24;MQ0=16;MQRankSum=-5.119;QD=56.53;ReadPosRankSum=-2.112;VQSLOD=3.1192;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:14.53:0,15,250	0/0:15,0:15:45.15:0,45,2816	0/0:61,0:24:43.53:0,44,1059	0/0:54,0:22:40.98:0,41,1375	0/0:31,0:31:78.27:0,78,4712	0/0:41,0:41:93.30:0,93,5108	0/0:26,0:27:34.84:0,35,536	1/1:11,33:44:96.17:1840,96,0	0/0:42,0:42:82.81:0,83,4747	0/0:47,0:47:99:0,123,6624	0/0:19,0:19:54.16:0,54,3288	0/0:37,0:37:99:0,103,5117	0/0:41,0:41:99:0,105,5882	0/0:43,0:43:93.32:0,93,5419	0/0:49,0:49:99:0,120,7138	0/0:36,0:36:87.30:0,87,5205	0/0:39,0:39:96.31:0,96,5594	0/0:35,0:35:62.27:0,62,4595	0/0:23,0:23:50.28:0,50,2657	0/0:37,0:37:87.30:0,87,4717	0/0:86,0:86:99:0,152,12679	0/0:40,0:40:99:0,105,6005	0/0:28,0:28:78.27:0,78,4548	0/0:44,0:44:99:0,111,6633	0/0:36,0:36:93.32:0,93,6200	0/1:20,5:25:99:1596,0,549	0/0:37,0:37:99:0,102,5828	1/1:2,14:17:33.11:1425,33,0
chr10	100067527	.	GTA	G	968.34	PASS	AB=0.960;AC=7;AF=0.125;AN=56;BaseQRankSum=13.231;DP=1107;FS=0.466;HRun=0;HaplotypeScore=187.2476;InbreedingCoeff=0.5215;MQ=54.36;MQ0=23;MQRankSum=-5.813;QD=6.68;ReadPosRankSum=-1.801;VQSLOD=2.9488;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:42:9.09:9,0,101	0/0:16,0:16:48.13:0,48,846	0/0:68,1:20:43.12:0,43,682	0/0:64,0:22:43.39:0,43,770	0/0:31,0:31:90.18:0,90,1532	0/0:43,0:43:99:0,120,2076	0/1:26,0:26:70.74:112,0,71	1/1:38,0:37:47.54:553,48,0	0/0:43,0:43:98.89:0,99,1788	0/0:46,0:46:99:0,138,2478	0/0:25,0:25:75.18:0,75,1242	0/0:41,0:41:99:0,117,1942	0/0:42,0:42:99:0,120,2140	0/0:41,0:41:99:0,111,2018	0/0:46,0:46:99:0,132,2411	0/0:35,0:35:99:0,105,1871	0/0:37,0:37:99:0,103,1844	0/0:36,0:35:62.79:0,63,1599	0/0:28,0:27:78.19:0,78,1267	0/0:35,0:35:99:0,102,1876	0/0:92,0:92:99:0,232,4279	0/0:38,0:38:99:0,108,1969	0/0:31,0:31:90.28:0,90,1638	0/0:49,0:49:99:0,135,2396	0/0:37,0:37:99:0,105,1976	0/1:19,3:22:99:271,0,127	0/0:37,0:37:99:0,111,1961	1/1:16,1:17:31.71:165,32,0
chr10	100067582	.	TTGTATGTGTG	T	3884.65	PASS	AB=0.808;AC=7;AF=0.125;AN=56;BaseQRankSum=6.235;DP=1120;FS=8.259;HRun=0;HaplotypeScore=332.5115;InbreedingCoeff=0.8365;MQ=54.34;MQ0=21;MQRankSum=-6.100;QD=29.65;ReadPosRankSum=-3.629;VQSLOD=1.3165;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,6:40:30.68:608,31,0	0/0:17,0:17:42.12:0,42,1704	0/0:58,0:22:35.95:0,36,846	0/0:66,0:32:43.02:0,43,1028	0/0:31,0:31:63.22:0,63,2629	0/0:32,0:32:72.25:0,72,3147	0/0:45,0:45:99:0,111,4001	1/1:39,0:37:57.13:1068,57,0	0/0:41,0:41:96.30:0,96,3786	0/0:52,0:52:99:0,123,5072	0/0:27,0:27:69.21:0,69,3064	0/0:42,0:42:99:0,115,4418	0/0:54,0:54:99:0,138,5773	0/0:40,0:41:99:0,101,3766	0/0:50,0:50:99:0,120,5108	0/0:46,0:46:99:0,126,5571	0/0:37,0:37:78.22:0,78,3124	0/0:38,0:37:80.86:0,81,2521	0/0:21,0:18:35.99:0,36,1264	0/0:37,0:37:87.28:0,87,3417	0/0:86,0:86:99:0,177,6464	0/0:36,0:36:75.24:0,75,2642	0/0:34,0:34:84.27:0,84,3590	0/0:45,0:45:93.30:0,93,4177	0/0:29,0:29:66.18:0,66,2643	1/1:6,25:31:74.95:1784,75,0	0/0:23,0:23:60.14:0,60,2212	0/1:16,5:21:39.80:424,0,40
chr10	100068017	.	G	GA	2088.59	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-9.759;DP=576;FS=5.603;HRun=6;HaplotypeScore=59.1857;InbreedingCoeff=0.9704;MQ=89.20;MQ0=0;MQRankSum=-4.410;QD=28.61;ReadPosRankSum=-2.397;VQSLOD=3.3776;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:23:48.15:604,48,0	0/0:7,0:7:21.05:0,21,214	0/0:24,0:23:52.47:0,52,471	0/0:28,0:29:74.99:0,75,709	0/0:35,0:35:99:0,99,986	0/0:23,0:23:63.12:0,63,635	1/1:1,4:5:15.05:186,15,0	1/1:2,15:16:45.11:538,45,0	0/0:16,0:16:45.10:0,45,459	0/0:31,0:31:87.18:0,87,877	0/0:17,0:17:51.09:0,51,508	0/0:16,0:16:42.09:0,42,428	0/0:15,0:15:45.07:0,45,444	0/0:21,0:21:60.13:0,60,611	0/0:28,0:28:75.15:0,75,759	0/0:19,0:19:51.10:0,51,513	0/0:23,0:23:63.12:0,63,634	0/0:17,0:17:45.08:0,45,451	0/0:16,0:16:39.06:0,39,383	0/0:32,0:32:87.18:0,87,880	0/0:12,0:12:33.06:0,33,331	0/0:20,0:20:60.13:0,60,611	0/0:25,0:25:72.16:0,72,733	0/0:17,0:17:48.11:0,48,489	0/0:22,0:22:63.13:0,63,636	1/1:0,23:23:69.20:854,69,0	0/0:38,0:38:99:0,102,1024	1/1:3,2:5:6.02:75,6,0
chr10	100069141	.	T	TTTG	5257.93	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-11.752;DP=662;FS=15.993;HRun=0;HaplotypeScore=93.3399;InbreedingCoeff=0.9913;MQ=73.22;MQ0=0;MQRankSum=-5.096;QD=43.82;ReadPosRankSum=0.259;VQSLOD=5.5509;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,30:36:81.27:1643,81,0	0/0:11,0:11:33.11:0,33,497	0/0:26,0:26:60.17:0,60,830	0/0:18,0:18:35.37:0,35,447	0/0:24,0:24:63.19:0,63,907	0/0:20,0:20:54.14:0,54,786	1/1:4,14:18:36.12:731,36,0	1/1:6,19:27:66.17:1250,66,0	0/0:19,0:19:45.15:0,45,678	0/0:29,0:29:63.19:0,63,896	0/0:33,0:33:84.28:0,84,1264	0/0:25,0:25:63.17:0,63,906	0/0:27,0:27:75.25:0,75,1129	0/0:24,0:24:69.23:0,69,1037	0/0:29,0:29:63.19:0,63,910	0/0:18,0:18:45.14:0,45,658	0/0:33,0:33:90.28:0,90,1315	0/0:11,0:11:27.05:0,27,381	0/0:28,0:28:57.19:0,57,840	0/0:37,0:37:99:0,102,1535	0/0:25,0:25:60.20:0,60,901	0/0:17,0:17:36.11:0,36,523	0/0:21,0:21:54.18:0,54,810	0/0:17,0:17:48.15:0,48,702	0/0:24,0:24:63.21:0,63,947	1/1:6,21:28:75.19:1438,75,0	0/0:26,0:26:60.19:0,60,883	1/1:3,6:11:11.39:195,11,0
chr10	100070738	.	AAGG	A	1977.29	PASS	AB=0.848;AC=26;AF=0.565;AN=46;BaseQRankSum=-1.216;DP=352;FS=6.181;HRun=0;HaplotypeScore=59.4095;InbreedingCoeff=0.5782;MQ=70.11;MQ0=5;MQRankSum=1.669;QD=9.37;ReadPosRankSum=-0.281;VQSLOD=1.9825;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:0:0,0,0	1/1:5,1:7:5.99:61,6,0	./.	./.	1/1:10,7:16:18.06:241,18,0	1/1:8,7:15:15.05:201,15,0	0/0:12,0:16:6:0,6,62	0/0:9,0:9:3.01:0,3,41	./.	0/0:19,0:18:6.02:0,6,107	0/0:10,0:10:9.03:0,9,174	1/1:8,5:14:15.02:182,15,0	1/1:8,1:9:3.01:40,3,0	1/1:9,6:15:15.05:201,15,0	1/1:9,6:16:24.01:283,24,0	1/1:10,3:13:6.02:80,6,0	0/1:13,10:23:2.06:109,0,2	0/0:8,0:8:2.60:0,3,10	0/0:8,0:7:0.47:0,0,1	./.	0/0:8,0:8:0:0,0,0	1/1:16,11:27:18.06:241,18,0	1/1:10,3:13:6.02:81,6,0	1/1:7,5:11:15.05:201,15,0	1/1:3,9:12:15.05:201,15,0	0/0:10,0:10:4.53:0,5,15	0/0:6,0:6:3.01:0,3,37	./.
chr10	100070808	.	G	GGAA	3103.85	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-9.142;DP=441;FS=16.500;HRun=0;HaplotypeScore=71.4277;InbreedingCoeff=0.9695;MQ=69.23;MQ0=7;MQRankSum=-0.367;QD=40.31;ReadPosRankSum=-1.471;VQSLOD=3.2817;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:12:21.07:440,21,0	0/0:7,0:7:18.06:0,18,276	0/0:29,0:17:17.96:0,18,225	0/0:19,0:13:23.08:0,23,293	0/0:22,0:22:54.17:0,54,801	0/0:25,0:25:52.96:0,53,804	1/1:2,10:14:21.07:448,21,0	1/1:7,20:27:63.22:1281,63,0	0/0:6,0:6:18.05:0,18,255	0/0:24,0:24:66.21:0,66,974	0/0:8,0:8:18.05:0,18,255	0/0:17,0:17:51.17:0,51,781	0/0:10,0:10:27.09:0,27,413	0/0:30,0:30:78.25:0,78,1169	0/0:15,0:15:36.11:0,36,529	0/0:16,0:16:42.14:0,42,643	0/0:18,0:18:45.15:0,45,678	0/0:4,0:4:9.03:0,9,138	0/0:8,0:8:18.06:0,18,276	0/0:10,0:10:24.07:0,24,347	0/0:18,0:18:45.13:0,45,645	0/0:20,0:20:39.13:0,39,596	0/0:19,0:19:48.02:0,48,686	0/0:16,0:15:39.13:0,39,588	0/0:15,0:15:33.11:0,33,504	1/1:2,15:17:42.09:788,42,0	0/0:8,0:8:21.07:0,21,322	1/1:0,5:7:15.05:320,15,0
chr10	100073526	.	CTG	C	863.48	PASS	AB=0.792;AC=12;AF=0.214;AN=56;BaseQRankSum=0.703;DP=280;FS=42.970;HRun=0;HaplotypeScore=51.2247;InbreedingCoeff=-0.2842;MQ=56.78;MQ0=0;MQRankSum=-7.265;QD=6.59;ReadPosRankSum=5.556;VQSLOD=1.4486;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,1:9:24.08:0,24,472	0/1:3,1:4:35.58:36,0,170	0/0:8,0:8:24.08:0,24,459	0/0:10,0:8:24.07:0,24,434	0/0:15,3:18:31.52:0,32,589	0/1:6,3:9:99:118,0,222	0/0:10,0:10:30.10:0,30,606	0/0:9,0:9:27.09:0,27,537	0/1:15,1:16:12.30:12,0,745	0/1:5,3:8:83.55:84,0,223	0/1:7,3:10:34.30:34,0,277	0/0:9,0:9:24.08:0,24,466	0/1:7,1:8:18.05:18,0,346	0/1:8,1:9:24.15:24,0,401	0/0:5,0:5:15.05:0,15,299	0/0:7,0:7:21.07:0,21,425	0/0:8,0:8:21.07:0,21,419	0/0:9,0:9:27.09:0,27,500	0/0:12,1:12:30.10:0,30,600	0/1:17,3:19:69.31:69,0,858	0/0:10,0:10:21.07:0,21,426	0/1:9,4:13:99:134,0,369	0/1:3,7:9:99:198,0,101	0/0:9,0:9:12.04:0,12,230	0/1:4,6:10:90.26:230,0,90	0/0:13,0:12:36.12:0,36,702	0/1:12,2:14:55.45:55,0,668	0/0:1,0:1:3.01:0,3,61
chr10	100073797	.	A	ACT	5387.51	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-13.307;DP=653;FS=3.457;HRun=0;HaplotypeScore=83.7068;InbreedingCoeff=0.9890;MQ=74.21;MQ0=0;MQRankSum=-1.133;QD=43.10;ReadPosRankSum=-1.485;VQSLOD=5.9216;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:66.23:1197,66,0	0/0:9,0:9:27.04:0,27,356	0/0:16,0:15:42.93:0,43,569	0/0:26,0:26:66.08:0,66,891	0/0:36,0:36:99:0,105,1455	0/0:26,0:26:75.24:0,75,1085	1/1:0,27:27:72.25:1315,72,0	1/1:7,25:32:75.21:1254,75,0	0/0:30,0:30:87.26:0,87,1226	0/0:19,0:19:57.14:0,57,796	0/0:14,0:14:39.11:0,39,539	0/0:24,0:24:69.20:0,69,944	0/0:22,0:22:63.20:0,63,892	0/0:25,0:25:75.22:0,75,1050	0/0:23,0:23:69.23:0,69,1015	0/0:29,0:29:87.27:0,87,1227	0/0:21,0:20:59.96:0,60,792	0/0:17,0:17:45.14:0,45,643	0/0:20,0:20:60.18:0,60,832	0/0:24,0:24:69.14:0,69,915	0/0:29,0:29:84.22:0,84,1192	0/0:18,0:18:51.16:0,51,729	0/0:16,0:16:45.11:0,45,631	0/0:27,0:27:78.23:0,78,1093	0/0:19,0:19:57.18:0,57,821	1/1:1,27:28:81.23:1391,81,0	0/0:38,0:38:99:0,111,1591	1/1:7,4:11:10.19:231,10,0
chr10	100073932	.	TGGGCAATATATAA	T	4363.22	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.437;DP=601;FS=13.601;HRun=0;HaplotypeScore=215.6291;InbreedingCoeff=0.9833;MQ=75.30;MQ0=0;MQRankSum=-6.800;QD=48.48;ReadPosRankSum=-2.852;VQSLOD=2.5012;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,9:19:12.04:453,12,0	0/0:8,0:8:21.07:0,21,1278	0/0:17,0:18:27.01:0,27,793	0/0:10,0:10:22.63:0,23,500	0/0:37,0:37:87.30:0,87,4952	0/0:28,0:28:78.25:0,78,4502	1/1:6,5:11:15.05:568,15,0	1/1:13,14:27:42.13:1161,42,0	0/0:20,0:20:42.13:0,42,2303	0/0:31,0:31:78.27:0,78,4553	0/0:20,0:20:51.18:0,51,3092	0/0:26,0:26:75.26:0,75,4508	0/0:19,0:19:45.15:0,45,2513	0/0:18,0:18:54.17:0,54,3242	0/0:18,0:18:51.18:0,51,3243	0/0:34,0:34:96.32:0,96,5615	0/0:19,0:19:39.13:0,39,2449	0/0:18,0:18:42.14:0,42,2496	0/0:17,0:17:45.15:0,45,2591	0/0:29,0:29:63.22:0,63,3920	0/0:11,0:11:30.10:0,30,1838	0/0:30,0:30:78.27:0,78,4447	0/0:28,0:28:81.28:0,81,4722	0/0:15,0:15:36.12:0,36,2101	0/0:28,0:28:66.23:0,66,3870	1/1:7,17:25:54.16:1635,54,0	0/0:29,0:29:69.24:0,69,4069	1/1:1,7:8:15.05:546,15,0
chr10	100074518	.	A	AG	4500.46	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=3.790;DP=582;FS=12.737;HRun=0;HaplotypeScore=63.1800;InbreedingCoeff=0.9994;MQ=72.46;MQ0=0;MQRankSum=-2.993;QD=42.06;ReadPosRankSum=-0.259;VQSLOD=4.1234;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:84.29:1342,84,0	0/0:12,0:12:36.12:0,36,503	0/0:16,0:13:39.12:0,39,523	0/0:31,0:30:85.70:0,86,1046	0/0:20,0:20:60.20:0,60,836	0/0:9,0:9:27.07:0,27,360	1/1:0,24:24:60.20:959,60,0	1/1:2,20:20:57.18:856,57,0	0/0:23,0:23:69.21:0,69,947	0/0:13,0:13:33.10:0,33,447	0/0:14,0:14:39.11:0,39,526	0/0:20,0:20:60.20:0,60,838	0/0:18,0:18:51.17:0,51,713	0/0:26,0:26:78.21:0,78,1051	0/0:19,0:19:57.19:0,57,785	0/0:19,0:19:57.19:0,57,797	0/0:42,1:43:99:0,111,1532	0/0:16,0:16:45.15:0,45,629	0/0:19,0:19:57.19:0,57,793	0/0:15,0:15:45.15:0,45,626	0/0:60,0:60:99:0,178,2438	0/0:20,0:20:60.17:0,60,814	0/0:14,0:14:42.14:0,42,586	0/0:21,0:21:57.19:0,57,797	0/0:17,0:17:51.16:0,51,696	1/1:0,18:18:54.18:864,54,0	0/0:10,0:10:30.10:0,30,418	1/1:0,12:12:30.10:480,30,0
chr10	100074724	.	G	GA	4215.80	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-3.868;DP=453;FS=16.269;HRun=4;HaplotypeScore=46.2984;InbreedingCoeff=0.9882;MQ=69.29;MQ0=1;MQRankSum=-1.144;QD=36.66;ReadPosRankSum=-1.260;VQSLOD=2.7570;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,35:36:89.42:1266,89,0	0/0:7,0:7:21.06:0,21,238	0/0:9,0:9:27.07:0,27,300	0/0:5,0:5:15:0,15,156	0/0:19,0:19:54.15:0,54,613	0/0:19,0:19:54.15:0,54,612	1/1:1,12:13:36.12:493,36,0	1/1:3,32:35:96.28:1267,96,0	0/0:12,1:12:13.14:0,13,311	0/0:19,0:19:57.16:0,57,646	0/0:12,0:12:33.08:0,33,364	0/0:13,0:13:39.11:0,39,442	0/0:13,0:13:39.08:0,39,423	0/0:15,0:15:42.12:0,42,476	0/0:18,0:18:54.15:0,54,611	0/0:11,0:11:33.09:0,33,374	0/0:18,0:18:45.12:0,45,507	0/0:17,0:17:51.15:0,51,577	0/0:16,0:16:45.13:0,45,510	0/0:30,0:30:87.25:0,87,987	0/0:11,0:11:30.09:0,30,340	0/0:20,0:20:54.15:0,54,613	0/0:15,0:15:42.12:0,42,476	0/0:12,0:12:36.10:0,36,408	0/0:18,0:18:51.15:0,51,579	1/1:2,17:19:51.17:698,51,0	0/0:8,0:8:21.04:0,21,228	1/1:0,12:12:36.12:492,36,0
chr10	100075739	.	A	AGTGT	759.59	PASS	AB=1.000;AC=19;AF=0.365;AN=52;BaseQRankSum=1.177;DP=549;FS=5.456;HRun=0;HaplotypeScore=110.7304;InbreedingCoeff=0.5435;MQ=68.26;MQ0=31;MQRankSum=-1.745;QD=4.24;ReadPosRankSum=-1.327;VQSLOD=1.6847;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:6.91:0,7,85	0/0:4,0:4:6.02:0,6,92	./.	./.	0/0:15,0:15:15.03:0,15,194	0/0:9,0:9:3.01:0,3,46	0/0:20,0:21:9.90:0,10,114	1/1:18,0:17:2.37:8,2,0	1/1:10,4:13:2.60:66,3,0	0/0:14,0:16:10.75:0,11,141	0/0:9,0:10:3:0,3,28	0/0:9,0:9:3.01:0,3,46	0/1:15,0:15:45.81:46,0,148	1/1:17,0:17:4.51:46,5,0	0/0:14,0:14:14.93:0,15,211	0/0:8,0:8:3:0,3,46	0/0:19,0:19:23.36:0,23,328	1/1:11,0:6:3.01:39,3,0	1/1:20,0:20:6.02:79,6,0	1/1:14,0:14:5.55:106,6,0	1/1:27,0:23:15.04:250,15,0	0/0:14,0:13:17.93:0,18,223	1/1:17,0:17:2.68:11,3,0	0/0:34,0:33:42.12:0,42,576	0/0:31,0:31:19.59:0,20,329	0/0:15,0:17:9.01:0,9,84	1/1:26,0:25:14.59:271,15,0	0/0:3,0:3:3.01:0,3,52
chr10	100075803	.	G	GA	1719.81	PASS	AB=0.833;AC=22;AF=0.393;AN=56;BaseQRankSum=9.855;DP=421;FS=4.506;HRun=1;HaplotypeScore=66.2757;InbreedingCoeff=0.8414;MQ=64.89;MQ0=22;MQRankSum=-4.909;QD=12.83;ReadPosRankSum=-1.396;VQSLOD=1.8340;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,2:9:8.91:40,9,0	0/1:7,0:7:9.04:9,0,160	0/0:25,0:10:8.83:0,9,204	0/0:32,0:14:15.20:0,15,321	0/0:25,0:25:63.13:0,63,780	0/0:20,0:20:50.18:0,50,567	1/1:15,0:12:17.65:103,18,0	1/1:15,0:13:32.41:226,32,0	1/1:7,0:7:14.52:153,15,0	0/0:10,0:10:26.98:0,27,312	0/0:16,0:16:48.15:0,48,637	0/0:22,0:22:57.07:0,57,710	0/0:8,0:8:24.05:0,24,284	0/0:10,0:9:24.55:0,25,317	0/0:12,0:12:30.06:0,30,346	0/0:14,0:14:19.01:0,19,450	0/0:17,0:17:47.90:0,48,569	0/1:4,4:4:7.14:50,0,7	1/1:1,8:9:21.93:297,22,0	1/1:5,3:7:18.34:182,18,0	1/1:5,12:14:18.06:254,18,0	0/0:18,0:17:45.10:0,45,546	0/0:15,0:15:36.06:0,36,453	0/0:27,0:26:67.74:0,68,821	0/0:16,0:16:41.98:0,42,455	1/1:12,1:11:26.25:188,26,0	1/1:5,8:13:17.71:222,18,0	1/1:9,2:10:26.43:211,26,0
chr10	100075805	.	G	GAAA	2348.95	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=2.521;DP=429;FS=11.934;HRun=0;HaplotypeScore=79.1467;InbreedingCoeff=0.9704;MQ=66.50;MQ0=17;MQRankSum=-8.702;QD=31.32;ReadPosRankSum=-3.836;VQSLOD=2.3155;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,7:12:12.15:185,12,0	0/0:7,0:7:21.04:0,21,329	0/0:24,0:10:23.99:0,24,373	0/0:33,0:16:37.87:0,38,509	0/0:23,0:23:66.23:0,66,1209	0/0:19,0:19:48.60:0,49,837	1/1:4,13:14:24.96:438,25,0	1/1:3,15:17:45.13:746,45,0	0/0:7,0:7:18.53:0,19,270	0/0:13,0:13:30.10:0,30,545	0/0:16,0:16:48.16:0,48,894	0/0:20,0:20:57.20:0,57,1050	0/0:9,0:9:27.08:0,27,466	0/0:10,0:9:24.55:0,25,449	0/0:12,0:12:30.10:0,30,557	0/0:14,0:14:42.14:0,42,749	0/0:17,0:17:48.15:0,48,862	0/0:9,0:5:9.03:0,9,133	0/0:10,0:10:26.76:0,27,377	0/0:8,0:8:17.97:0,18,235	0/0:15,0:13:18.06:0,18,287	0/0:17,0:16:42.14:0,42,775	0/0:15,0:15:42.14:0,42,755	0/0:28,0:27:72.24:0,72,1300	0/0:16,0:16:48.14:0,48,810	1/1:4,10:12:30.10:595,30,0	0/0:12,0:12:24.07:0,24,345	1/1:2,9:10:27.06:557,27,0
chr10	100075811	.	GA	G	1032.98	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.080;DP=426;FS=4.717;HRun=1;HaplotypeScore=64.4086;InbreedingCoeff=0.9334;MQ=73.38;MQ0=10;MQRankSum=-1.509;QD=16.14;ReadPosRankSum=-0.688;VQSLOD=3.4119;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:3.09:0,3,23	0/0:7,0:7:16.82:0,17,213	0/0:17,0:13:24.55:0,25,304	0/0:28,1:19:34.41:0,34,457	0/0:24,0:24:66.11:0,66,847	0/0:17,0:17:40.38:0,40,596	0/0:18,0:17:23.30:0,23,143	0/0:23,0:20:5.90:0,6,216	1/1:2,6:8:20.79:182,21,0	0/0:15,0:15:45.11:0,45,539	0/0:17,0:17:51.13:0,51,696	0/0:18,0:18:54.15:0,54,735	0/0:9,0:9:27.04:0,27,338	0/0:11,0:11:30.06:0,30,389	0/0:13,0:13:36.08:0,36,458	0/0:18,1:19:16.09:0,16,584	0/0:15,0:15:45.06:0,45,601	1/1:6,2:6:14.94:146,15,0	1/1:11,0:11:32.57:268,33,0	1/1:4,7:11:23.77:191,24,0	1/1:12,2:13:20.90:173,21,0	0/0:15,0:15:44.91:0,45,589	0/0:14,0:14:42.04:0,42,520	0/0:26,0:25:69.14:0,69,879	0/0:14,0:14:42.08:0,42,501	0/0:15,0:13:24.40:0,24,216	1/1:9,3:12:30.39:258,30,0	0/0:12,0:11:25.29:0,25,201
chr10	100076540	.	CTTG	C	1329.39	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.133;DP=694;FS=0.696;HRun=0;HaplotypeScore=127.5371;InbreedingCoeff=0.9989;MQ=88.55;MQ0=0;MQRankSum=-2.710;QD=34.98;ReadPosRankSum=2.513;VQSLOD=4.4088;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,35:38:90.30:1424,90,0	0/0:18,0:18:54.15:0,54,1160	0/0:22,0:22:51.18:0,51,1131	0/0:31,0:31:78.01:0,78,1541	0/0:30,0:30:90.31:0,90,1998	0/0:29,0:29:84.29:0,84,1876	0/0:23,0:23:66.23:0,66,1470	0/0:34,0:34:90.31:0,90,1991	0/0:14,0:14:42.14:0,42,859	0/0:29,0:29:81.28:0,81,1771	0/0:29,0:29:84.25:0,84,1809	0/0:28,0:28:84.23:0,84,1825	0/0:38,0:38:99:0,114,2465	0/0:21,0:21:60.19:0,60,1293	0/0:19,0:19:57.20:0,57,1268	0/0:13,0:13:39.13:0,39,871	0/0:35,0:35:99:0,102,2237	0/0:19,0:19:57.20:0,57,1273	0/0:18,0:18:54.14:0,54,1157	0/0:25,0:25:75.26:0,75,1644	0/0:20,0:20:57.18:0,57,1206	0/0:26,0:26:69.24:0,69,1538	0/0:26,0:26:78.22:0,78,1612	0/0:24,0:24:69.24:0,69,1535	0/0:23,0:23:63.22:0,63,1390	0/0:24,0:24:63.22:0,63,1377	0/0:27,0:26:75.25:0,75,1598	0/0:11,0:11:27.08:0,27,560
chr10	100077017	.	T	TCCAAAGTAAGGACTGGTC	24350.43	PASS	AB=0.771;AC=9;AF=0.161;AN=56;BaseQRankSum=7.704;DP=617;FS=8.277;HRun=0;HaplotypeScore=291.5295;InbreedingCoeff=0.8666;MQ=78.43;MQ0=0;MQRankSum=-15.906;QD=177.74;ReadPosRankSum=-2.951;VQSLOD=3.3006;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,10:30:66.23:4741,66,0	0/0:13,0:13:36.10:0,36,1638	0/0:19,0:19:50.74:0,51,1828	0/0:17,0:17:42.01:0,42,1633	0/0:27,0:27:78.27:0,78,3540	0/0:17,0:17:51.18:0,51,2651	1/1:18,4:23:66.18:4346,66,0	1/1:37,0:41:99:5639,102,0	0/0:20,0:20:54.18:0,54,2549	0/0:27,0:27:81.28:0,81,4050	0/0:26,0:26:78.27:0,78,3878	0/0:17,0:17:51.18:0,51,2436	0/0:23,0:23:69.22:0,69,3209	0/0:16,0:16:48.16:0,48,2496	0/0:18,0:18:54.19:0,54,2636	0/0:20,0:20:57.18:0,57,2665	0/0:22,0:22:66.20:0,66,3086	0/0:15,0:15:42.14:0,42,2027	0/0:23,0:23:69.22:0,69,3044	0/0:24,0:24:72.25:0,72,3534	0/0:18,0:18:45.15:0,45,1993	0/0:27,0:27:81.24:0,81,3758	0/0:7,0:7:21.07:0,21,989	0/0:20,0:20:57.17:0,57,2497	0/0:20,0:20:54.18:0,54,2633	0/1:19,8:27:99:5612,0,231	0/0:44,0:44:99:0,126,5400	1/1:8,8:16:48.16:4013,48,0
chr10	100077713	.	TAA	T	5662.88	PASS	AB=0.542;AC=21;AF=0.375;AN=56;BaseQRankSum=11.095;DP=552;FS=0.714;HRun=11;HaplotypeScore=69.9985;InbreedingCoeff=0.9204;MQ=71.50;MQ0=1;MQRankSum=-0.729;QD=24.20;ReadPosRankSum=1.716;VQSLOD=4.7221;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:36.09:383,36,0	0/0:7,0:8:23.56:0,24,311	0/0:14,0:12:29.94:0,30,343	0/0:9,0:9:15.96:0,16,129	0/0:33,0:34:86.77:0,87,1281	0/0:23,0:24:71.72:0,72,1049	1/1:1,12:13:27.07:287,27,0	1/1:9,22:31:66.04:668,66,0	1/1:3,19:21:48.11:511,48,0	0/0:29,0:29:75.25:0,75,1135	0/0:22,0:24:59.67:0,60,842	0/0:20,0:20:57.18:0,57,852	0/0:21,0:21:57.19:0,57,876	0/0:12,0:13:38.62:0,39,563	0/0:18,0:20:59.16:0,59,810	0/0:22,0:24:53.13:0,53,717	0/0:13,0:13:36.12:0,36,553	1/1:3,18:21:54.13:575,54,0	1/1:4,18:22:54.11:574,54,0	1/1:1,27:28:75.17:798,75,0	1/1:1,11:12:24.06:255,24,0	0/0:18,0:18:45.11:0,45,626	0/0:17,0:19:47.12:0,47,643	0/0:9,0:9:26.12:0,26,376	0/0:19,0:19:54.18:0,54,831	0/1:4,22:26:20.26:609,0,20	1/1:4,33:37:77.67:810,78,0	1/1:0,7:7:18.05:192,18,0
chr10	100078292	.	A	AGT	2931.71	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-0.197;DP=648;FS=11.472;HRun=0;HaplotypeScore=84.0049;InbreedingCoeff=0.9952;MQ=85.21;MQ0=1;MQRankSum=-1.296;QD=35.32;ReadPosRankSum=-0.371;VQSLOD=5.2914;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1446	0/0:10,0:10:30.10:0,30,420	0/0:25,0:25:69.19:0,69,911	0/0:26,0:26:66.22:0,66,900	0/0:26,0:26:69.21:0,69,947	0/0:27,0:27:75.23:0,75,1030	1/1:0,16:18:45.15:811,45,0	1/1:7,16:23:45.15:806,45,0	0/0:13,0:13:33.11:0,33,462	0/0:28,0:28:81.27:0,81,1134	0/0:23,0:23:69.23:0,69,965	0/0:14,0:14:39.13:0,39,546	0/0:27,0:27:81.26:0,81,1115	0/0:21,0:21:57.19:0,57,798	0/0:17,0:17:51.16:0,51,697	0/0:18,0:18:51.15:0,51,681	0/0:44,0:44:99:0,126,1758	0/0:24,0:24:69.23:0,69,966	0/0:17,0:17:45.13:0,45,599	0/0:28,0:28:81.27:0,81,1135	0/0:27,0:27:69.19:0,69,914	0/0:27,0:27:81.27:0,81,1134	0/0:14,0:14:39.13:0,39,539	0/0:25,0:25:72.24:0,72,1007	0/0:17,0:17:51.16:0,51,696	1/1:4,25:29:34.44:1204,34,0	0/0:30,0:29:87.29:0,87,1217	1/1:0,8:12:15.05:270,15,0
chr10	100079129	.	C	CT	493.91	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.076;DP=654;FS=0.000;HRun=8;HaplotypeScore=64.2941;InbreedingCoeff=0.8585;MQ=66.19;MQ0=3;MQRankSum=-0.380;QD=23.52;ReadPosRankSum=1.306;VQSLOD=4.2819;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:72.03:0,72,658	0/0:11,0:11:24:0,24,220	0/0:41,0:20:42.94:0,43,307	0/0:23,0:16:9.19:0,9,133	0/0:35,0:35:92.98:0,93,836	0/0:19,0:19:54.03:0,54,494	1/1:2,19:21:51.15:589,51,0	0/0:36,0:36:90.01:0,90,813	0/0:20,0:20:51:0,51,462	0/0:22,0:22:42.01:0,42,382	0/0:21,0:21:51.01:0,51,462	0/0:18,0:18:45.02:0,45,412	0/0:20,0:20:57.03:0,57,521	0/0:14,0:15:38.05:0,38,335	0/0:29,0:29:72.02:0,72,654	0/0:23,1:24:31.41:0,31,542	0/0:26,0:26:69.04:0,69,631	0/0:21,0:21:53.53:0,54,494	0/0:16,0:16:42.01:0,42,380	0/0:28,0:28:78.01:0,78,704	0/0:24,0:24:60.02:0,60,548	0/0:23,0:23:56.97:0,57,506	0/0:23,0:23:63.01:0,63,568	0/0:18,0:18:54.03:0,54,494	0/0:33,0:33:78.01:0,78,704	0/0:30,0:30:78.03:0,78,710	0/0:23,0:22:63.02:0,63,572	0/0:2,0:2:5.99:0,6,48
chr10	100079716	.	AT	A	2092.61	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.084;DP=428;FS=1.471;HRun=8;HaplotypeScore=40.0315;InbreedingCoeff=0.9181;MQ=71.99;MQ0=0;MQRankSum=-2.871;QD=22.75;ReadPosRankSum=-3.577;VQSLOD=2.2714;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:53.98:502,54,0	0/0:10,0:10:30.09:0,30,362	0/0:9,0:9:18.05:0,18,209	0/0:3,0:3:6.02:0,6,72	0/0:24,0:24:69.21:0,69,833	0/0:24,0:24:72.22:0,72,870	1/1:1,0:8:12.22:36,12,0	1/1:4,28:32:84.11:800,84,0	0/0:11,0:11:33.10:0,33,399	0/0:28,0:28:78.22:0,78,928	0/0:25,0:25:63.18:0,63,750	0/0:14,0:14:39.10:0,39,459	0/0:14,0:14:42.13:0,42,507	0/0:9,0:9:27.08:0,27,326	0/0:13,0:13:36.11:0,36,435	0/0:7,0:7:21.06:0,21,254	0/0:29,0:28:78.24:0,78,942	0/0:12,0:12:36.11:0,36,435	0/0:18,0:18:45.14:0,45,544	0/0:21,0:21:57.16:0,57,671	0/0:3,0:3:6.02:0,6,72	0/0:7,0:7:18.06:0,18,217	0/0:10,0:10:24.07:0,24,289	0/0:2,0:2:6.02:0,6,72	0/0:24,0:24:72.21:0,72,859	1/1:0,18:18:54.09:521,54,0	0/0:19,0:19:54.17:0,54,652	1/1:0,14:14:42.07:406,42,0
chr10	100080038	.	CTGTT	C	1361.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.569;DP=575;FS=9.182;HRun=0;HaplotypeScore=90.5354;InbreedingCoeff=0.9958;MQ=83.32;MQ0=0;MQRankSum=-3.874;QD=40.03;ReadPosRankSum=1.622;VQSLOD=3.1029;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:34:84.20:1456,84,0	0/0:12,0:12:33.11:0,33,864	0/0:19,0:19:39.13:0,39,972	0/0:16,0:16:42.14:0,42,1043	0/0:26,0:26:66.23:0,66,1729	0/0:20,0:20:57.20:0,57,1483	0/0:17,0:17:48.12:0,48,1199	0/0:33,0:33:93.32:0,93,2427	0/0:21,0:21:60.21:0,60,1561	0/0:27,0:27:81.25:0,81,1932	0/0:20,0:20:57.20:0,57,1493	0/0:27,0:27:78.27:0,78,2042	0/0:19,0:19:54.19:0,54,1413	0/0:20,0:20:60.21:0,60,1564	0/0:20,0:20:60.21:0,60,1544	0/0:32,0:32:96.33:0,96,2515	0/0:26,0:26:66.23:0,66,1728	0/0:16,0:16:45.15:0,45,1152	0/0:12,0:12:30.10:0,30,778	0/0:17,0:17:48.16:0,48,1221	0/0:12,0:12:33.11:0,33,847	0/0:17,0:17:48.16:0,48,1252	0/0:23,0:23:66.23:0,66,1726	0/0:10,0:10:27.09:0,27,701	0/0:18,0:18:51.16:0,51,1284	0/0:25,0:25:69.24:0,69,1781	0/0:24,0:24:66.23:0,66,1717	0/0:12,0:12:24.08:0,24,623
chr10	100080412	.	C	CATT	744.84	PASS	AB=0.827;AC=10;AF=0.250;AN=40;BaseQRankSum=-5.036;DP=256;FS=4.606;HRun=0;HaplotypeScore=38.5622;InbreedingCoeff=-0.0245;MQ=71.86;MQ0=2;MQRankSum=2.576;QD=6.71;ReadPosRankSum=0.410;VQSLOD=1.2325;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:19:14.86:0,15,102	0/0:0,0:1:2.98:0,3,21	./.	./.	0/0:9,0:9:6.01:0,6,64	0/1:6,2:8:30.19:105,0,30	0/0:4,0:6:0:0,0,0	0/1:39,0:38:0.70:1,0,53	0/0:1,0:2:5.95:0,6,42	0/0:5,0:5:3:0,3,29	1/1:6,1:7:3.01:57,3,0	0/0:10,0:10:12.04:0,12,157	./.	1/1:6,0:6:3.01:57,3,0	0/0:2,0:3:2.97:0,3,20	0/1:5,1:6:33.21:51,0,33	0/1:10,6:16:24.15:214,0,24	0/0:5,0:18:35.71:0,36,252	./.	./.	./.	./.	0/0:8,0:8:3.01:0,3,39	./.	0/0:14,0:14:12.03:0,12,143	0/1:11,1:12:33.22:51,0,33	0/0:4,0:6:5.95:0,6,42	0/1:8,7:17:18.15:322,0,18
chr10	100081592	.	CTT	C	479.89	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.968;DP=552;FS=0.000;HRun=11;HaplotypeScore=76.8200;InbreedingCoeff=0.9343;MQ=72.85;MQ0=0;MQRankSum=-0.828;QD=22.85;ReadPosRankSum=1.502;VQSLOD=3.3153;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:20:50.65:0,51,727	0/0:7,0:9:23.04:0,23,264	0/0:15,0:12:27.08:0,27,369	0/0:14,0:13:19.08:0,19,184	0/0:25,0:27:77.73:0,78,1125	0/0:18,0:19:47.63:0,48,680	1/1:3,18:21:54.12:575,54,0	0/0:26,0:28:60.13:0,60,827	0/0:4,0:9:9.02:0,9,96	0/0:18,0:18:48.16:0,48,738	0/0:16,0:16:42.09:0,42,599	0/0:26,0:28:71.72:0,72,1047	0/0:18,0:19:47.49:0,47,648	0/0:13,0:14:38.59:0,39,522	0/0:19,0:19:54.17:0,54,798	0/0:21,0:21:51.14:0,51,723	0/0:25,0:25:54.17:0,54,791	0/0:6,0:22:42.05:0,42,429	0/0:7,0:21:51.07:0,51,510	0/0:2,0:26:75.05:0,75,747	0/0:5,0:16:24.04:0,24,244	0/0:22,0:25:62.13:0,62,830	0/0:15,0:19:56.14:0,56,746	0/0:15,0:18:53.15:0,53,735	0/0:20,0:20:54.17:0,54,811	0/0:19,0:20:56.67:0,57,819	0/0:9,0:28:57.07:0,57,583	0/0:12,0:14:38.61:0,39,545
chr10	100083020	.	TA	T	4326.20	PASS	AB=1.000;AC=51;AF=0.944;AN=54;BaseQRankSum=1.572;DP=183;FS=0.000;HRun=1;HaplotypeScore=140.7006;InbreedingCoeff=0.4040;MQ=43.41;MQ0=0;MQRankSum=0.254;QD=23.77;ReadPosRankSum=2.127;VQSLOD=4.8428;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:5.68:33,6,0	./.	0/1:2,0:2:0:0,0,0	0/0:1,0:1:2.98:0,3,21	1/1:0,6:6:5.97:46,6,0	1/1:0,16:16:45:396,45,0	1/1:0,5:5:11.68:40,12,0	1/1:0,8:8:24.07:270,24,0	1/1:0,11:11:33.01:298,33,0	1/1:0,5:5:15.03:154,15,0	1/1:0,5:5:1.98:57,2,0	1/1:0,10:10:29.98:258,30,0	1/1:0,11:11:32.03:270,32,0	1/1:0,11:11:32.95:277,33,0	1/1:0,13:13:38.56:316,39,0	1/1:0,6:6:18.01:161,18,0	1/1:0,5:5:15.01:136,15,0	1/1:0,3:3:9.02:98,9,0	1/1:0,7:7:21.06:238,21,0	1/1:0,8:8:23.65:174,24,0	1/1:0,7:7:9.47:142,9,0	1/1:0,2:2:5.90:42,6,0	1/1:0,7:7:20.73:152,21,0	1/1:0,5:5:9.83:67,10,0	1/1:0,11:11:32.92:277,33,0	1/1:0,4:4:12.03:129,12,0	1/1:0,9:9:26.80:234,27,0	1/1:0,2:2:6:59,6,0
chr10	100083023	.	C	CA	2291.93	PASS	AB=1.000;AC=51;AF=0.944;AN=54;BaseQRankSum=2.843;DP=183;FS=8.769;HRun=0;HaplotypeScore=147.8694;InbreedingCoeff=0.4283;MQ=43.41;MQ0=0;MQRankSum=-0.187;QD=12.59;ReadPosRankSum=1.793;VQSLOD=4.3742;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:3.29:40,3,0	./.	0/1:1,0:2:0:0,0,0	0/0:1,0:1:3.01:0,3,31	1/1:6,0:6:5.10:23,5,0	1/1:16,0:16:42.78:212,43,0	1/1:0,5:5:14.15:69,14,0	1/1:8,0:8:23.65:154,24,0	1/1:11,0:11:30.23:151,30,0	1/1:5,0:5:13.63:73,14,0	1/1:5,0:5:10.92:52,11,0	1/1:10,0:10:27.14:129,27,0	1/1:11,0:11:20.64:126,21,0	1/1:11,0:11:30.44:143,30,0	1/1:12,0:13:36.27:169,36,0	1/1:6,0:6:17.18:87,17,0	1/1:5,0:5:14.26:72,14,0	1/1:3,0:3:8.79:53,9,0	1/1:7,0:7:20.68:134,21,0	1/1:8,0:8:19.28:82,19,0	1/1:7,0:7:19.64:93,20,0	1/1:2,0:2:5.24:21,5,0	1/1:7,0:7:18.20:77,18,0	1/1:5,0:5:10.96:62,11,0	1/1:11,0:11:19.54:126,20,0	1/1:4,0:4:11.77:72,12,0	1/1:9,0:9:25.69:135,26,0	1/1:2,0:2:5.62:29,6,0
chr10	100083025	.	G	GT	5830.82	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=-0.166;DP=214;FS=10.192;HRun=1;HaplotypeScore=159.0923;InbreedingCoeff=0.6026;MQ=41.68;MQ0=0;MQRankSum=-1.176;QD=28.44;ReadPosRankSum=1.222;VQSLOD=3.3938;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,3:6:11.25:132,11,0	./.	0/0:2,0:2:0:0,0,0	0/0:1,0:1:3.01:0,3,42	1/1:4,5:9:6:58,6,0	1/1:2,16:18:48.13:529,48,0	0/0:6,0:6:4.07:0,4,8	1/1:2,8:10:27.09:354,27,0	1/1:2,11:13:36.05:397,36,0	1/1:0,5:5:15.05:182,15,0	1/1:1,5:6:12:118,12,0	1/1:3,10:13:30.04:307,30,0	1/1:0,11:11:32.87:327,33,0	1/1:2,11:13:36.08:373,36,0	1/1:1,12:13:38.88:387,39,0	1/1:3,6:9:24.03:263,24,0	1/1:0,5:5:15.04:165,15,0	1/1:0,3:3:9.03:116,9,0	1/1:2,7:9:27.09:357,27,0	1/1:1,8:9:26.96:251,27,0	1/1:2,7:9:21.05:220,21,0	1/1:1,2:3:9.01:101,9,0	1/1:0,6:7:20.61:183,21,0	1/1:2,5:7:18.03:187,18,0	1/1:0,11:11:24.89:310,25,0	1/1:0,4:4:12.04:152,12,0	1/1:1,8:10:22.42:293,22,0	1/1:0,2:2:6.02:70,6,0
chr10	100083232	.	AG	A	1658.37	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.698;DP=513;FS=1.629;HRun=1;HaplotypeScore=57.8654;InbreedingCoeff=0.9903;MQ=66.19;MQ0=0;MQRankSum=2.537;QD=23.03;ReadPosRankSum=-0.294;VQSLOD=3.5144;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:78.13:744,78,0	0/0:10,0:10:30.10:0,30,470	0/0:6,0:6:15.04:0,15,215	0/0:9,0:9:24.06:0,24,339	0/0:30,0:30:78.79:0,79,1173	0/0:21,0:21:63.01:0,63,883	0/0:13,0:13:35.40:0,35,236	1/1:5,13:18:45.04:416,45,0	0/0:17,0:17:48.16:0,48,758	0/0:27,0:27:81.22:0,81,1145	0/0:17,0:17:51.07:0,51,742	0/0:17,0:17:48.16:0,48,755	0/0:21,0:21:60.08:0,60,851	0/0:17,0:17:50.89:0,51,665	0/0:13,0:13:38.88:0,39,523	0/0:14,0:14:39.06:0,39,582	0/0:24,0:24:72.21:0,72,1093	0/0:23,0:23:69.16:0,69,1041	0/0:19,0:19:54.10:0,54,786	0/0:25,0:25:72.24:0,72,1104	0/0:18,0:18:54.17:0,54,834	0/0:21,0:21:63.06:0,63,904	0/0:23,0:23:69.17:0,69,1047	0/0:19,0:19:56.99:0,57,771	0/0:20,0:20:57.11:0,57,830	1/1:2,18:20:54.09:514,54,0	0/0:17,0:17:48.06:0,48,698	1/1:0,5:5:15.02:143,15,0
chr10	100083433	.	GCA	G	851.58	PASS	AB=0.950;AC=26;AF=0.500;AN=52;BaseQRankSum=2.162;DP=536;FS=3.135;HRun=0;HaplotypeScore=100.3142;InbreedingCoeff=-0.1915;MQ=66.01;MQ0=13;MQRankSum=-0.445;QD=2.28;ReadPosRankSum=2.407;VQSLOD=1.9169;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:33.30:39,0,33	1/1:3,1:4:3.01:33,3,0	./.	./.	1/1:7,0:7:2.98:21,3,0	0/1:18,2:20:46.93:47,0,229	1/1:12,4:17:10.76:76,11,0	0/0:16,0:14:0.47:0,0,1	0/1:20,1:22:55:64,0,55	0/1:14,1:15:19.79:20,0,59	0/0:9,0:8:6.02:0,6,80	1/1:15,8:21:11.78:110,12,0	0/1:25,0:24:19.60:20,0,244	0/1:14,0:14:11.64:12,0,31	0/1:12,1:12:53.07:56,0,53	0/1:12,0:13:34.41:34,0,114	0/1:25,2:28:75.53:76,0,229	1/1:11,2:13:5.07:64,5,0	1/1:15,0:13:7.26:46,7,0	0/0:15,0:18:3.01:0,3,32	0/1:35,1:35:55.10:109,0,55	0/0:15,0:16:5.87:0,6,68	0/0:18,1:18:20.62:0,21,216	0/1:35,4:39:79.35:79,0,485	0/1:13,1:14:14.47:14,0,149	0/0:24,0:24:29.68:0,30,259	0/1:15,2:17:20.37:86,0,20	0/1:4,0:3:0:0,0,0
chr10	100083471	.	A	ACACG	1886.11	PASS	AB=0.947;AC=14;AF=0.250;AN=56;BaseQRankSum=-2.398;DP=611;FS=15.370;HRun=0;HaplotypeScore=130.4331;InbreedingCoeff=0.1746;MQ=49.35;MQ0=36;MQRankSum=-2.622;QD=6.96;ReadPosRankSum=-0.446;VQSLOD=1.5621;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:45,0:44:64.52:65,0,261	0/0:6,0:6:14.97:0,15,131	0/0:18,0:1:3.01:0,3,30	0/0:18,0:1:3.01:0,3,41	0/0:14,0:14:32.39:0,32,245	0/0:30,0:30:69.48:0,69,737	1/1:27,0:24:29.33:249,29,0	1/1:23,0:18:28.98:210,29,0	0/1:26,0:25:21.71:337,0,22	0/0:13,0:13:23.73:0,24,271	0/0:14,0:13:26.97:0,27,263	0/0:22,0:20:28.72:0,29,304	0/0:19,0:18:40.44:0,40,511	0/0:16,0:16:38.27:0,38,318	0/0:18,0:17:32.23:0,32,307	0/0:15,0:15:34.21:0,34,364	0/0:32,0:32:58.92:0,59,604	0/1:14,0:14:13.63:169,0,14	0/1:26,0:23:27.68:140,0,28	0/1:13,1:13:22.11:54,0,22	0/1:43,0:42:60.83:414,0,61	0/0:17,0:16:32.94:0,33,293	0/0:21,0:20:35.98:0,36,377	0/0:53,0:52:99:0,105,1217	0/0:14,0:14:17:0,17,304	0/1:30,0:29:99:253,0,189	0/1:8,6:14:25.96:89,0,26	1/1:7,0:6:5.43:74,5,0
chr10	100083550	.	TAC	T	547.71	PASS	AB=0.938;AC=15;AF=0.288;AN=52;BaseQRankSum=1.054;DP=600;FS=8.315;HRun=0;HaplotypeScore=106.1197;InbreedingCoeff=-0.2056;MQ=53.55;MQ0=13;MQRankSum=1.575;QD=1.63;ReadPosRankSum=-0.588;VQSLOD=1.4773;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,4:41:27.51:253,28,0	0/0:7,0:7:3.01:0,3,45	./.	0/0:34,0:21:6.48:0,6,68	0/1:25,0:25:0.30:0,0,359	0/1:27,0:28:24.19:24,0,301	0/1:12,1:13:47.03:47,0,138	0/0:27,0:24:14.43:0,14,114	0/0:26,0:26:20.34:0,20,469	0/0:28,0:27:23.18:0,23,355	0/1:15,1:16:16.21:16,0,224	0/1:21,0:21:4.87:5,0,319	0/0:17,1:19:12.27:0,12,407	0/1:21,1:22:31.61:32,0,371	0/1:18,1:17:46.67:47,0,123	0/0:10,0:10:21.07:0,21,306	0/1:29,1:31:6.49:6,0,675	0/1:25,6:29:99:113,0,484	0/1:17,2:16:43.54:44,0,182	0/0:7,0:7:12.03:0,12,161	0/0:33,0:33:25.48:0,25,390	0/0:17,0:18:26.40:0,26,445	0/1:18,0:18:20.87:21,0,402	0/1:33,3:35:73.89:74,0,622	0/1:13,4:17:15:15,0,205	0/0:6,0:18:32.09:0,32,214	0/0:13,0:13:24:0,24,258	./.
chr10	100083914	.	CAT	C	160.42	PASS	AB=0.967;AC=10;AF=0.179;AN=56;BaseQRankSum=7.659;DP=541;FS=17.429;HRun=0;HaplotypeScore=110.2501;InbreedingCoeff=0.2232;MQ=50.51;MQ0=20;MQRankSum=-5.058;QD=1.05;ReadPosRankSum=1.377;VQSLOD=0.5654;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:14.29:0,14,118	0/0:8,0:8:21.96:0,22,373	0/0:39,0:10:15.42:0,15,205	0/1:34,1:5:5.36:5,0,78	0/0:20,0:20:59.70:0,60,868	0/0:19,0:18:17.07:0,17,553	0/1:29,0:29:20.34:20,0,83	0/0:39,0:39:92.84:0,93,768	0/1:11,1:12:22.23:22,0,32	0/0:24,0:23:63.14:0,63,961	0/0:21,0:21:50.96:0,51,763	0/0:24,0:23:54.30:0,54,833	0/0:26,0:26:67.10:0,67,907	0/0:17,0:17:38.20:0,38,713	0/0:21,0:21:44.50:0,44,567	0/0:10,0:10:8.89:0,9,303	0/0:21,0:20:56.78:0,57,865	0/1:9,0:9:10.15:33,0,10	1/1:15,0:10:10.21:99,10,0	0/1:14,0:14:6.88:17,0,7	1/1:8,2:8:2.69:16,3,0	0/0:8,0:8:20.86:0,21,244	0/0:14,0:14:38.95:0,39,605	0/0:11,0:11:32.83:0,33,523	0/0:14,0:14:34.33:0,34,552	0/0:19,1:18:5.42:0,5,139	0/1:26,3:29:34.51:88,0,35	0/0:8,0:8:15.73:0,16,117
chr10	100083916	.	TAC	T	867.19	PASS	AB=0.928;AC=11;AF=0.196;AN=56;BaseQRankSum=6.845;DP=547;FS=20.255;HRun=0;HaplotypeScore=107.3329;InbreedingCoeff=0.6302;MQ=50.33;MQ0=22;MQRankSum=-4.034;QD=7.54;ReadPosRankSum=2.218;VQSLOD=2.0006;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:8.76:0,9,92	0/0:8,0:8:23.63:0,24,341	0/0:40,0:9:23.88:0,24,244	0/0:37,0:6:10.89:0,11,88	0/0:21,0:21:63.18:0,63,963	0/0:19,0:18:38.10:0,38,558	0/1:27,2:29:17.61:165,0,18	0/0:37,0:37:91.84:0,92,1245	0/1:10,0:11:6.22:72,0,6	0/0:27,0:26:63.18:0,63,1025	0/0:22,0:22:51:0,51,788	0/0:26,0:25:64.46:0,64,876	0/0:27,0:27:65.86:0,66,945	0/0:17,0:17:29.01:0,29,668	0/0:18,0:18:33.11:0,33,512	0/0:10,0:10:10.45:0,10,209	0/0:20,0:19:45.15:0,45,753	1/1:8,0:8:8.04:104,8,0	1/1:8,7:11:25.71:258,26,0	0/1:13,1:13:4.96:65,0,5	1/1:9,1:8:2.80:40,3,0	0/0:9,0:9:24.07:0,24,362	0/0:15,0:15:41.96:0,42,624	0/0:13,0:13:36.84:0,37,540	0/0:15,0:15:34.22:0,34,505	0/0:19,0:17:45.42:0,45,424	1/1:28,0:28:27.71:323,28,0	0/0:8,0:8:23.90:0,24,264
chr10	100083922	.	C	CGTGTGTGTGTGTGT	2148.65	PASS	AB=0.951;AC=12;AF=0.214;AN=56;BaseQRankSum=6.596;DP=553;FS=25.450;HRun=0;HaplotypeScore=198.6383;InbreedingCoeff=0.4293;MQ=48.79;MQ0=25;MQRankSum=-4.185;QD=16.28;ReadPosRankSum=1.088;VQSLOD=1.1817;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:6.02:0,6,80	0/0:10,0:10:27.07:0,27,998	0/0:44,0:10:27.09:0,27,669	0/0:43,0:8:13.86:0,14,229	0/0:23,0:23:66.21:0,66,2573	0/0:19,0:18:41.83:0,42,1427	1/1:20,0:27:0.98:279,1,0	0/0:35,0:35:73.23:0,73,1558	1/1:6,4:10:6.14:389,6,0	0/0:25,0:25:72.24:0,72,2597	0/0:23,0:23:51.17:0,51,1750	0/0:23,0:22:66.19:0,66,2425	0/0:31,0:31:72.23:0,72,2453	0/0:18,0:18:51.17:0,51,1875	0/0:15,0:15:33.11:0,33,1069	0/0:10,0:10:21.07:0,21,685	0/0:18,0:17:48.16:0,48,1750	0/0:3,0:4:3.90:0,4,14	0/1:13,0:10:3.59:314,0,4	1/1:8,5:14:8.94:88,9,0	1/1:13,0:11:3.01:40,3,0	0/0:10,0:10:27.09:0,27,1013	0/0:17,0:17:42.61:0,43,1478	0/0:15,0:15:45.15:0,45,1565	0/0:16,0:16:39.13:0,39,1427	0/1:19,0:17:99:194,0,337	0/1:23,4:26:33.79:948,0,34	0/1:7,0:7:45.84:46,0,231
chr10	100084607	.	TAC	T	2003.85	PASS	AB=0.917;AC=13;AF=0.232;AN=56;BaseQRankSum=9.478;DP=411;FS=1.132;HRun=0;HaplotypeScore=53.2433;InbreedingCoeff=0.8260;MQ=60.38;MQ0=1;MQRankSum=1.760;QD=21.55;ReadPosRankSum=3.640;VQSLOD=3.9280;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:26:20.94:0,21,181	0/0:5,0:5:15.05:0,15,245	0/0:13,0:9:0.43:0,0,135	0/0:15,0:12:23.93:0,24,294	0/0:17,0:17:51.12:0,51,770	0/0:19,0:19:53.90:0,54,814	0/0:4,0:9:15:0,15,132	0/0:50,0:50:99:0,105,1482	1/1:2,12:14:33.10:405,33,0	0/0:17,0:17:42.12:0,42,637	0/0:23,1:24:26.31:0,26,935	0/0:14,0:14:42.14:0,42,677	0/0:8,0:8:21.07:0,21,342	0/0:10,0:10:24.08:0,24,391	0/0:15,0:14:36.08:0,36,514	0/0:7,0:7:12.04:0,12,196	0/0:23,0:23:54.13:0,54,795	1/1:3,10:13:27.08:332,27,0	1/1:6,8:14:27.08:330,27,0	1/1:1,11:12:30.09:369,30,0	1/1:0,7:7:12.04:148,12,0	0/0:3,0:3:9:0,9,98	0/0:7,0:7:20.10:0,20,296	0/0:6,0:6:18.04:0,18,268	0/0:12,0:11:33.08:0,33,488	0/0:15,0:15:45.07:0,45,634	1/1:5,17:22:48.15:590,48,0	0/1:10,1:11:15.83:16,0,272
chr10	100085074	.	C	CG	345.63	PASS	AB=0.620;AC=6;AF=0.107;AN=56;BaseQRankSum=5.848;DP=512;FS=0.707;HRun=0;HaplotypeScore=73.5510;InbreedingCoeff=0.4423;MQ=65.08;MQ0=1;MQRankSum=-5.296;QD=4.38;ReadPosRankSum=-1.390;VQSLOD=3.0996;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,10:21:19.80:20,0,20	0/0:5,0:5:15.05:0,15,210	0/0:30,0:25:69.79:0,70,944	0/0:26,0:23:49.67:0,50,765	0/0:22,0:22:66.11:0,66,886	0/0:24,0:24:66.22:0,66,922	0/1:8,11:19:1.35:313,0,1	0/1:9,2:17:4.04:64,0,4	0/0:17,0:17:41.89:0,42,378	0/0:19,0:19:57.19:0,57,795	0/0:10,0:10:30.10:0,30,419	0/0:20,0:20:60.20:0,60,837	0/0:23,0:23:69.20:0,69,916	0/0:18,0:18:54.18:0,54,754	0/0:22,0:21:63.19:0,63,860	0/0:12,0:12:36.12:0,36,502	0/0:41,0:41:99:0,120,1669	0/0:25,0:25:62.34:0,62,511	0/0:11,1:12:20.25:0,20,309	0/0:9,0:9:21.03:0,21,225	0/0:27,1:28:57.50:0,57,551	0/0:15,0:15:44.74:0,45,590	0/0:8,0:8:18.06:0,18,252	0/0:16,0:16:48.16:0,48,665	0/0:16,0:16:48.16:0,48,670	1/1:12,1:16:2.78:58,3,0	0/0:15,0:15:19.38:0,19,327	0/1:1,3:5:2.67:3,0,3
chr10	100085075	.	A	AGG	3477.22	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-0.927;DP=531;FS=7.196;HRun=8;HaplotypeScore=78.2631;InbreedingCoeff=0.7790;MQ=62.97;MQ0=3;MQRankSum=-1.997;QD=17.05;ReadPosRankSum=-0.246;VQSLOD=1.2348;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:20:14.71:112,0,15	0/0:5,0:5:15.04:0,15,167	0/0:30,0:23:53.34:0,53,559	0/0:26,0:23:53.80:0,54,546	0/0:20,0:22:48.04:0,48,592	0/0:24,0:24:63.11:0,63,686	0/1:18,0:18:6.17:124,0,6	1/1:27,0:25:32.18:338,32,0	1/1:4,13:17:27.09:429,27,0	0/0:19,0:19:45.11:0,45,501	0/0:11,0:11:30.07:0,30,329	0/0:20,0:20:54.13:0,54,602	0/0:23,0:23:57.13:0,57,635	0/0:18,0:18:48.12:0,48,535	0/0:21,0:20:54.12:0,54,602	0/0:12,0:12:33.08:0,33,368	0/0:41,0:41:99:0,105,1170	1/1:3,21:27:56.16:827,56,0	1/1:8,3:12:16.52:169,17,0	1/1:3,9:12:15.01:210,15,0	1/1:10,16:34:48.60:615,49,0	0/0:15,0:15:39.06:0,39,423	0/0:8,0:8:24.03:0,24,249	0/0:16,0:16:36.06:0,36,401	0/0:16,0:16:45.11:0,45,502	1/1:14,0:14:11.36:117,11,0	1/1:7,11:18:32.65:495,33,0	0/1:3,0:3:7.94:42,0,8
chr10	100085773	.	CACCT	C	1502.13	PASS	AB=0.568;AC=9;AF=0.161;AN=56;BaseQRankSum=9.982;DP=546;FS=48.082;HRun=0;HaplotypeScore=111.0677;InbreedingCoeff=0.8589;MQ=63.70;MQ0=2;MQRankSum=-5.576;QD=22.42;ReadPosRankSum=-2.114;VQSLOD=1.2740;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:15.05:190,15,0	0/0:9,0:9:27.09:0,27,693	0/0:16,0:14:30.54:0,31,674	0/0:18,0:14:22.59:0,23,459	0/0:29,0:29:81.28:0,81,2051	0/0:26,0:26:78.21:0,78,1706	1/1:10,0:10:18.03:212,18,0	1/1:6,15:21:39.01:463,39,0	0/0:22,0:21:60.20:0,60,1422	0/0:19,0:19:51.17:0,51,1218	0/0:25,0:25:72.25:0,72,1767	0/0:28,0:28:66.21:0,66,1545	0/0:22,0:22:66.21:0,66,1551	0/0:18,0:18:54.19:0,54,1287	0/0:25,0:25:63.22:0,63,1505	0/0:13,0:13:36.12:0,36,927	0/0:24,0:23:39.03:0,39,837	0/0:9,0:9:27.09:0,27,658	0/0:14,0:12:24.08:0,24,555	0/0:21,0:21:60.18:0,60,1424	0/0:17,0:17:51.04:0,51,1248	0/0:26,0:26:69.24:0,69,1705	0/0:33,0:33:93.30:0,93,2294	0/0:16,0:16:45.14:0,45,1022	0/0:26,0:26:69.24:0,69,1727	0/1:5,16:21:38.43:442,0,38	0/0:22,0:22:57.07:0,57,1293	1/1:9,0:9:27.09:359,27,0
chr10	100085802	.	CTCTT	C	564.30	PASS	AB=1.000;AC=5;AF=0.096;AN=52;BaseQRankSum=0.714;DP=519;FS=1.849;HRun=0;HaplotypeScore=121.3411;InbreedingCoeff=0.4828;MQ=56.73;MQ0=8;MQRankSum=1.047;QD=8.42;ReadPosRankSum=-0.407;VQSLOD=2.9531;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:1.77:0,2,4	0/0:8,0:8:9.02:0,9,149	./.	./.	0/0:31,0:31:51.58:0,52,923	0/0:26,1:27:0.01:0,0,762	0/0:6,0:5:0.89:0,1,2	0/0:10,0:7:5.83:0,6,34	0/0:18,0:16:18.17:0,18,121	0/0:23,0:23:47.18:0,47,928	0/0:26,0:26:45.13:0,45,882	0/0:24,0:24:39.10:0,39,674	0/0:22,0:22:26.96:0,27,536	0/0:17,0:17:36.11:0,36,700	0/1:18,0:18:1.07:1,0,410	0/0:17,0:18:12.88:0,13,437	1/1:9,18:26:0.06:165,0,0	0/0:14,0:14:26.93:0,27,258	0/0:14,0:10:11.67:0,12,102	0/0:26,0:24:38.98:0,39,467	0/0:18,0:16:2.73:0,3,26	0/0:29,0:29:57.16:0,57,1148	0/0:29,0:29:48.15:0,48,920	0/0:27,0:27:42.44:0,42,830	1/1:18,4:21:36.09:501,36,0	0/0:15,0:15:8.99:0,9,146	0/0:21,0:20:38.51:0,39,432	0/0:13,0:13:0.47:0,0,2
chr10	100085840	.	C	CTT	767.45	PASS	AB=0.973;AC=15;AF=0.288;AN=52;BaseQRankSum=8.215;DP=472;FS=1.201;HRun=3;HaplotypeScore=95.9025;InbreedingCoeff=0.2452;MQ=51.75;MQ0=12;MQRankSum=-6.563;QD=6.00;ReadPosRankSum=-0.043;VQSLOD=-0.0605;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:1.41:30,1,0	0/0:6,0:6:18.03:0,18,228	0/0:14,0:2:6:0,6,67	./.	0/0:24,0:24:62.77:0,63,880	0/0:23,0:23:69.16:0,69,938	./.	1/1:7,0:4:4.25:22,4,0	0/1:12,1:11:26.83:187,0,27	0/0:28,0:28:78.72:0,79,1122	0/0:22,0:21:63.16:0,63,867	0/0:21,0:21:63.16:0,63,865	0/0:21,0:21:50.16:0,50,777	0/0:18,0:18:51.10:0,51,682	0/0:18,0:18:41.23:0,41,623	0/1:21,0:21:99:190,0,314	0/0:23,0:23:18.38:0,18,181	0/1:12,0:13:29.02:29,0,117	1/1:8,1:4:11.98:111,12,0	0/1:20,1:17:99:135,0,116	0/1:5,0:3:8.11:26,0,8	0/0:23,0:23:69.18:0,69,963	0/0:25,0:24:72.19:0,72,1009	0/0:26,1:27:28.01:0,28,859	0/0:27,0:26:57.57:0,58,899	0/1:6,0:6:26.78:27,0,82	0/1:21,0:19:92.90:93,0,162	1/1:8,0:7:11.71:79,12,0
chr10	100085859	.	TTTTCTTTC	T	1791.29	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.132;DP=468;FS=4.388;HRun=0;HaplotypeScore=134.8464;InbreedingCoeff=0.7024;MQ=51.58;MQ0=5;MQRankSum=-6.453;QD=27.14;ReadPosRankSum=0.149;VQSLOD=3.3928;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:5.04:0,5,40	0/0:7,0:7:18.06:0,18,748	0/0:20,0:3:5.98:0,6,101	0/0:23,0:1:3.01:0,3,70	0/0:21,0:21:48.16:0,48,1654	0/0:21,0:21:51.17:0,51,1702	0/0:3,0:2:3.01:0,3,56	0/0:8,0:8:20.89:0,21,302	1/1:7,5:10:6.61:358,7,0	0/0:28,0:28:69.22:0,69,2265	0/0:24,0:24:57.13:0,57,1933	0/0:20,0:20:54.17:0,54,1927	0/0:22,0:22:48.64:0,49,1747	0/0:16,0:16:33.10:0,33,1199	0/0:19,0:19:54.19:0,54,1904	0/0:20,0:20:51:0,51,1492	0/0:20,0:20:30.10:0,30,990	1/1:9,0:9:5.69:92,6,0	0/0:5,0:2:1.82:0,2,5	1/1:13,8:17:23.61:545,24,0	0/0:3,0:2:0:0,0,0	0/0:25,0:25:63.20:0,63,1955	0/0:25,0:24:60.19:0,60,1974	0/0:28,0:28:46.20:0,46,1853	0/0:30,0:29:72.22:0,72,2715	0/0:3,0:3:6.49:0,6,181	1/1:11,13:22:47.70:939,48,0	0/0:7,0:7:5.34:0,5,22
chr10	100085921	.	TTC	T	2682.73	PASS	AB=0.778;AC=13;AF=0.260;AN=50;BaseQRankSum=12.652;DP=487;FS=7.745;HRun=0;HaplotypeScore=84.2947;InbreedingCoeff=0.6045;MQ=51.47;MQ0=19;MQRankSum=-4.609;QD=20.02;ReadPosRankSum=2.225;VQSLOD=3.7675;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:10,0:10:27.09:0,27,435	0/1:22,0:4:31.15:31,0,62	0/0:28,0:6:9.03:0,9,138	0/0:25,0:25:69.22:0,69,1093	0/0:20,0:20:48.12:0,48,767	1/1:3,0:3:3.01:32,3,0	./.	1/1:0,11:10:30.10:382,30,0	0/0:28,0:28:75.24:0,75,1196	0/0:22,0:22:63.18:0,63,972	0/0:18,0:18:42.13:0,42,665	0/0:19,0:19:48.16:0,48,796	0/0:21,0:21:57.17:0,57,926	0/0:23,0:23:66.20:0,66,1025	0/0:13,0:13:21.07:0,21,345	0/0:22,0:22:34.96:0,35,908	1/1:3,5:8:17.97:208,18,0	0/1:14,7:13:99:264,0,123	1/1:4,21:24:60.19:756,60,0	0/1:2,5:7:23.25:206,0,23	0/0:15,0:15:39.13:0,39,652	0/0:21,0:20:54.65:0,55,868	0/0:25,0:25:14.75:0,15,690	0/0:31,0:31:75.24:0,75,1200	0/0:2,0:1:3.01:0,3,50	1/1:6,31:36:82.01:974,82,0	./.
chr10	100085939	.	T	TCC	168.91	PASS	AB=0.876;AC=8;AF=0.148;AN=54;BaseQRankSum=6.424;DP=504;FS=27.223;HRun=0;HaplotypeScore=98.2579;InbreedingCoeff=0.2053;MQ=50.92;MQ0=12;MQRankSum=-6.371;QD=2.25;ReadPosRankSum=-3.321;VQSLOD=-0.2472;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:2,1:3:3:0,3,29	0/0:11,0:11:33.11:0,33,538	0/0:25,0:5:9.46:0,9,152	0/0:30,0:5:9.03:0,9,134	0/0:25,0:25:68.85:0,69,1031	0/0:19,0:19:48.16:0,48,781	./.	1/1:2,0:2:1.23:9,1,0	0/1:15,1:13:8.63:9,0,421	0/0:33,0:33:93.32:0,93,1517	0/0:20,0:20:60.20:0,60,976	0/0:16,0:16:48.16:0,48,781	0/0:18,0:18:54.18:0,54,881	0/0:19,0:19:54.18:0,54,879	0/0:24,0:24:72.23:0,72,1149	0/0:10,0:10:18.06:0,18,277	0/0:24,0:24:65.87:0,66,1036	0/1:8,1:9:24.78:25,0,214	0/0:24,0:15:30.70:0,31,541	0/0:29,0:29:57.98:0,58,795	0/0:7,0:7:20.81:0,21,306	0/0:16,0:16:45.15:0,45,734	0/0:22,0:22:51.17:0,51,831	0/0:26,0:26:42.06:0,42,770	0/0:27,0:27:81.28:0,81,1321	0/1:4,2:6:36.08:36,0,134	0/1:37,4:40:99:167,0,976	1/1:0,1:1:3.01:45,3,0
chr10	100085957	.	C	CCTTT	2364.24	PASS	AB=1.000;AC=30;AF=0.577;AN=52;BaseQRankSum=3.186;DP=510;FS=13.519;HRun=0;HaplotypeScore=104.9706;InbreedingCoeff=0.7012;MQ=53.10;MQ0=11;MQRankSum=-2.666;QD=8.35;ReadPosRankSum=-1.499;VQSLOD=1.7398;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:13.53:134,14,0	0/0:9,0:9:18.05:0,18,259	1/1:19,0:4:0.47:1,0,0	./.	1/1:10,19:29:48.01:743,48,0	1/1:10,8:18:9.03:212,9,0	./.	1/1:10,0:8:6.35:29,6,0	1/1:15,0:12:6.48:64,6,0	0/0:38,0:37:63.19:0,63,900	0/0:19,0:19:30.07:0,30,439	0/0:16,0:16:36.07:0,36,473	0/0:17,0:17:30.10:0,30,466	0/0:20,0:20:17.91:0,18,158	0/0:22,0:23:45.10:0,45,591	1/1:4,6:11:3.01:70,3,0	0/0:22,0:23:26.21:0,26,361	1/1:8,0:8:3.68:15,4,0	0/1:24,0:17:6.54:24,0,7	1/1:17,0:38:14.92:125,15,0	1/1:7,0:7:2.99:24,3,0	0/0:16,0:16:33.09:0,33,466	1/1:9,13:24:15.80:248,16,0	1/1:9,15:25:15.05:318,15,0	0/0:24,0:24:36.03:0,36,483	0/1:8,0:8:99:130,0,102	1/1:37,0:36:36.23:289,36,0	1/1:3,0:3:9.03:130,9,0
chr10	100086328	.	GGATA	G	940.29	PASS	AB=0.921;AC=21;AF=0.404;AN=52;BaseQRankSum=3.852;DP=514;FS=0.707;HRun=0;HaplotypeScore=96.6036;InbreedingCoeff=0.4117;MQ=56.11;MQ0=8;MQRankSum=2.599;QD=3.85;ReadPosRankSum=0.841;VQSLOD=1.9370;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:2.96:19,3,0	0/1:6,1:7:31:31,0,175	./.	./.	0/0:15,0:15:15:0,15,170	0/0:9,0:17:9.03:0,9,154	1/1:14,0:14:2.67:17,3,0	0/0:35,0:31:2.92:0,3,18	1/1:8,10:18:3.01:46,3,0	0/1:27,1:28:13.01:13,0,421	0/0:18,0:17:14.84:0,15,286	0/1:22,0:22:12.63:13,0,436	0/0:26,0:26:42.11:0,42,801	1/1:5,7:12:6.02:92,6,0	0/1:15,2:17:18.98:19,0,399	0/1:17,3:19:18.93:19,0,474	0/0:22,0:21:24.02:0,24,391	0/0:12,0:12:8.97:0,9,113	1/1:11,6:15:17.99:207,18,0	1/1:15,9:24:14.87:125,15,0	1/1:11,11:22:12.04:184,12,0	0/0:11,0:11:12.01:0,12,186	0/0:19,0:18:39.05:0,39,615	0/0:11,0:11:6.02:0,6,135	0/0:20,0:20:21.05:0,21,398	0/0:27,0:27:21.07:0,21,457	1/1:27,0:26:8.05:331,8,0	0/0:9,0:9:11.99:0,12,142
chr10	100087362	.	ATT	A	4222.02	PASS	AB=0.519;AC=9;AF=0.161;AN=56;BaseQRankSum=13.603;DP=544;FS=5.002;HRun=4;HaplotypeScore=66.7834;InbreedingCoeff=0.8700;MQ=72.63;MQ0=1;MQRankSum=-1.891;QD=40.21;ReadPosRankSum=-2.108;VQSLOD=3.8974;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:66.22:972,66,0	0/0:14,0:14:42.14:0,42,779	0/0:15,0:15:45.14:0,45,785	0/0:8,0:8:21.07:0,21,385	0/0:28,0:28:84.28:0,84,1531	0/0:22,0:22:66.23:0,66,1236	1/1:0,15:15:45.15:663,45,0	1/1:1,38:39:99:1635,114,0	0/0:18,0:18:54.19:0,54,1006	0/0:19,0:19:57.20:0,57,1068	0/0:17,0:17:51.17:0,51,956	0/0:22,0:22:66.23:0,66,1231	0/0:7,0:7:18.06:0,18,337	0/0:21,0:21:54.19:0,54,997	0/0:17,0:17:51.17:0,51,950	0/0:12,0:12:36.11:0,36,643	0/0:25,0:25:72.25:0,72,1332	0/0:22,0:21:57.14:0,57,1031	0/0:22,0:22:66.23:0,66,1228	0/0:34,0:34:99:0,99,1847	0/0:15,0:15:42.14:0,42,787	0/0:15,0:15:45.15:0,45,835	0/0:19,0:19:57.20:0,57,1057	0/0:12,0:12:33.07:0,33,552	0/0:27,0:27:78.27:0,78,1447	0/1:1,13:14:14.10:511,0,14	0/0:28,0:28:81.26:0,81,1484	1/1:0,10:10:30.10:442,30,0
chr10	100088235	.	A	ATG	2461.42	PASS	AB=0.815;AC=11;AF=0.204;AN=54;BaseQRankSum=8.343;DP=257;FS=14.567;HRun=0;HaplotypeScore=63.4043;InbreedingCoeff=0.6074;MQ=64.20;MQ0=2;MQRankSum=-4.236;QD=25.38;ReadPosRankSum=-0.660;VQSLOD=3.3100;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,10:15:23.72:376,24,0	0/0:2,0:2:6.02:0,6,91	0/0:4,0:4:2.20:0,2,40	0/1:5,0:5:6.01:13,0,6	0/0:12,0:12:27.06:0,27,364	0/0:12,0:12:33.08:0,33,443	1/1:12,0:12:14.98:125,15,0	1/1:11,27:39:99:1256,113,0	0/1:1,0:1:0:0,0,0	0/0:10,0:10:30.10:0,30,439	0/0:13,0:13:33.11:0,33,497	0/0:6,0:6:18.06:0,18,274	0/0:7,0:7:18.06:0,18,275	0/0:7,0:7:18.03:0,18,232	0/0:5,0:5:12.04:0,12,183	0/0:1,0:1:3.01:0,3,46	0/0:16,0:16:42.08:0,42,535	0/0:9,0:9:11.97:0,12,123	0/0:8,0:8:20.98:0,21,224	0/0:15,0:15:27.04:0,27,311	./.	0/0:3,0:3:9.02:0,9,117	0/0:3,0:3:6.02:0,6,92	0/0:3,0:3:9:0,9,112	0/0:13,0:13:36.07:0,36,472	1/1:6,6:12:28.43:476,28,0	0/0:7,0:7:5.89:0,6,68	0/1:3,7:10:18.99:376,0,19
chr10	100088239	.	ATATG	A	786.90	PASS	AB=0.933;AC=9;AF=0.167;AN=54;BaseQRankSum=5.587;DP=236;FS=4.372;HRun=0;HaplotypeScore=73.2622;InbreedingCoeff=0.2352;MQ=62.40;MQ0=2;MQRankSum=-4.521;QD=7.95;ReadPosRankSum=-0.950;VQSLOD=1.8920;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,2:15:13.39:108,13,0	0/0:2,0:2:6.02:0,6,112	0/0:2,0:2:5.54:0,6,28	0/0:6,0:5:2.88:0,3,15	0/0:8,0:8:21.05:0,21,426	0/0:12,0:12:35.88:0,36,690	0/1:12,0:12:9.28:9,0,109	0/1:28,8:34:99:639,0,114	0/0:1,0:1:0:0,0,0	0/0:9,0:9:27.07:0,27,496	0/0:13,0:13:33.06:0,33,621	0/0:6,0:6:18.04:0,18,397	0/0:7,0:7:21.05:0,21,418	0/0:7,0:7:18.05:0,18,296	0/0:5,0:5:15.04:0,15,290	0/0:1,0:1:3.01:0,3,84	0/0:15,0:15:42:0,42,747	0/0:8,0:8:5.79:0,6,36	0/1:8,0:8:4.02:86,0,4	0/1:11,0:11:6.80:7,0,61	./.	0/0:3,0:3:6.02:0,6,155	0/0:2,0:2:6.02:0,6,167	0/0:3,0:3:6:0,6,92	0/0:13,0:13:32.67:0,33,634	0/1:9,2:11:26.92:50,0,27	1/1:6,0:6:5.36:22,5,0	0/0:9,1:10:18.01:0,18,88
chr10	100088241	.	ATGTGTG	A	572.99	PASS	AC=8;AF=0.160;AN=50;BaseQRankSum=1.450;DP=233;FS=0.000;HRun=0;HaplotypeScore=80.5625;InbreedingCoeff=0.6839;MQ=57.89;MQ0=3;MQRankSum=-3.481;QD=20.46;ReadPosRankSum=0.480;VQSLOD=2.9745;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:27.08:0,27,390	0/0:2,0:2:6.02:0,6,161	1/1:3,0:2:2.94:18,3,0	./.	0/0:8,0:8:18.06:0,18,487	0/0:13,0:13:33.11:0,33,969	0/0:13,0:13:18.49:0,18,276	0/0:35,0:33:24.23:0,24,694	0/0:1,0:1:0:0,0,0	0/0:9,0:9:21.06:0,21,483	0/0:13,0:13:30.08:0,30,670	0/0:6,0:6:18.05:0,18,457	0/0:7,0:7:21.07:0,21,580	0/0:8,0:8:18.06:0,18,471	0/0:6,0:6:18.06:0,18,484	0/0:1,0:1:3.01:0,3,104	0/0:14,0:14:33.11:0,33,948	./.	1/1:2,6:8:21.07:441,21,0	1/1:5,6:11:6.02:124,6,0	./.	0/0:2,0:2:6.02:0,6,176	0/0:2,0:2:6.02:0,6,208	0/0:2,0:2:3.01:0,3,69	0/0:11,0:12:30.09:0,30,734	0/0:11,0:11:30.09:0,30,522	1/1:2,4:6:5.91:120,6,0	0/0:10,0:10:27.05:0,27,606
chr10	100088247	.	GTGTGTGTA	G	532.25	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=1.046;DP=231;FS=0.000;HRun=0;HaplotypeScore=90.3822;InbreedingCoeff=0.6845;MQ=55.78;MQ0=3;MQRankSum=-3.185;QD=17.17;ReadPosRankSum=1.353;VQSLOD=2.4551;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:33.11:0,33,631	0/0:2,0:2:6.02:0,6,169	1/1:2,0:1:2.94:18,3,0	./.	0/0:7,0:7:18.06:0,18,552	0/0:14,0:14:36.11:0,36,1208	0/0:12,0:12:18.99:0,19,286	0/0:36,0:34:58.39:0,58,1317	0/0:3,0:3:0:0,0,0	0/0:7,0:7:21.06:0,21,515	0/0:12,0:12:30.08:0,30,735	0/0:6,0:6:18.05:0,18,520	0/0:7,0:7:21.07:0,21,657	0/0:7,0:7:18.06:0,18,598	0/0:6,0:6:18.06:0,18,591	0/0:1,0:1:3.01:0,3,136	0/0:15,0:15:33.11:0,33,1172	1/1:1,6:7:2.96:19,3,0	1/1:7,1:8:21:438,21,0	1/1:7,1:8:5.99:109,6,0	./.	0/0:2,0:2:6.02:0,6,208	0/0:2,0:2:6.02:0,6,271	0/0:1,0:1:3.01:0,3,69	0/0:11,0:11:30.09:0,30,856	0/0:12,0:12:36.12:0,36,763	1/1:4,1:6:5.85:88,6,0	0/0:14,0:14:36.08:0,36,1053
chr10	100088253	.	GTA	G	74.80	PASS	AB=0.919;AC=17;AF=0.354;AN=48;BaseQRankSum=0.414;DP=240;FS=0.000;HRun=0;HaplotypeScore=71.2049;InbreedingCoeff=-0.0332;MQ=55.79;MQ0=3;MQRankSum=1.074;QD=0.66;ReadPosRankSum=0.498;VQSLOD=1.4124;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:15.19:0,15,90	1/1:1,1:2:3.01:35,3,0	./.	./.	0/1:6,1:7:25.60:26,0,84	0/1:16,0:16:30.41:30,0,247	1/1:12,0:12:0.83:2,1,0	0/0:39,0:37:37.36:0,37,258	./.	0/0:7,0:7:9.02:0,9,101	0/1:10,0:11:2.14:2,0,106	0/0:6,0:6:6.02:0,6,93	0/0:7,0:7:5.82:0,6,91	0/1:5,2:7:22.59:23,0,125	0/1:6,1:7:19.62:20,0,147	0/0:1,0:1:3.01:0,3,47	0/1:10,3:14:10.59:11,0,275	1/1:6,0:6:2.96:19,3,0	1/1:8,0:8:2.77:19,3,0	0/1:8,0:8:12.50:13,0,21	0/0:5,0:5:2.99:0,3,24	0/0:2,0:2:3.01:0,3,47	0/0:2,0:2:6.02:0,6,93	./.	0/1:9,0:9:0.28:0,0,108	0/0:14,0:14:20.95:0,21,156	0/1:7,0:7:7.63:8,0,19	0/0:16,0:16:35.60:0,36,257
chr10	100088281	.	A	AGT	2825.12	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.325;DP=281;FS=5.846;HRun=0;HaplotypeScore=63.2534;InbreedingCoeff=0.8329;MQ=65.67;MQ0=4;MQRankSum=-1.372;QD=28.25;ReadPosRankSum=1.198;VQSLOD=4.3556;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,4:21:30.05:460,30,0	0/0:1,0:1:3:0,3,28	0/0:12,0:2:3.01:0,3,41	0/0:14,0:10:9.01:0,9,86	0/0:8,0:8:24.07:0,24,317	0/0:13,0:13:29.96:0,30,384	1/1:14,0:14:23.96:293,24,0	1/1:23,6:27:57.14:861,57,0	0/0:8,0:8:14.93:0,15,204	0/0:5,0:5:9.03:0,9,126	0/0:7,0:7:16.08:0,16,231	0/0:6,0:6:18.06:0,18,248	0/0:6,0:6:17.08:0,17,203	0/0:9,0:9:24.07:0,24,318	0/0:8,0:8:24.07:0,24,312	0/0:7,0:7:18.06:0,18,248	0/0:13,0:13:28.64:0,29,366	0/0:3,0:3:3.01:0,3,37	0/0:7,0:7:21.07:0,21,288	0/0:11,0:11:24.08:0,24,321	0/0:9,0:9:15.05:0,15,205	0/0:4,0:4:12.03:0,12,149	0/0:6,0:6:18.06:0,18,246	0/0:4,0:4:12.04:0,12,162	0/0:9,0:9:25.89:0,26,324	1/1:2,12:14:36.11:560,36,0	0/0:11,0:11:23.93:0,24,306	1/1:14,8:22:54.09:823,54,0
chr10	100089583	.	ATG	A	762.65	PASS	AB=0.893;AC=11;AF=0.196;AN=56;BaseQRankSum=5.973;DP=874;FS=3.518;HRun=0;HaplotypeScore=131.4090;InbreedingCoeff=-0.0619;MQ=61.24;MQ0=10;MQRankSum=0.993;QD=2.50;ReadPosRankSum=0.787;VQSLOD=2.6812;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:56:23.95:0,24,207	0/1:10,2:12:41.03:41,0,280	0/0:35,0:22:0:0,0,0	0/0:32,0:20:6.02:0,6,74	0/0:25,0:25:11.22:0,11,597	0/0:20,2:22:17.12:0,17,691	0/0:46,0:45:11:0,11,136	0/1:23,3:26:50.07:50,0,156	0/0:16,0:27:9.47:0,9,79	0/1:27,4:30:41.04:41,0,295	0/1:14,2:16:6.97:7,0,333	0/1:29,4:33:10.93:11,0,699	0/0:38,2:40:44.17:0,44,1038	0/1:36,4:40:34.15:34,0,796	0/0:32,2:34:6.81:0,7,944	0/1:23,4:28:87.15:87,0,658	0/1:35,2:37:13.94:14,0,660	0/0:14,0:27:11.86:0,12,120	0/0:24,0:29:23.66:0,24,197	0/0:4,0:12:3:0,3,26	0/0:90,0:86:53.84:0,54,389	0/0:19,1:20:11.09:0,11,608	0/0:18,0:18:36.12:0,36,529	0/1:46,5:51:95.72:96,0,1100	0/0:28,1:29:14.10:0,14,651	1/1:12,17:31:10.74:526,11,0	0/0:11,0:18:6.01:0,6,64	0/0:5,0:5:6.02:0,6,92
chr10	100089933	.	T	TC	4943.87	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.063;DP=685;FS=3.190;HRun=3;HaplotypeScore=78.2271;InbreedingCoeff=0.9923;MQ=77.67;MQ0=0;MQRankSum=-2.454;QD=33.86;ReadPosRankSum=-1.349;VQSLOD=4.8223;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,46:50:99:1567,114,0	0/0:9,0:9:24.07:0,24,288	0/0:38,0:37:90.50:0,90,1002	0/0:25,0:21:54.09:0,54,618	0/0:20,0:20:51.15:0,51,610	0/0:20,0:20:57.17:0,57,684	1/1:1,27:28:78.26:1075,78,0	1/1:7,32:39:98.73:1245,99,0	0/0:25,0:25:72.19:0,72,839	0/0:26,0:26:63.19:0,63,747	0/0:18,0:18:48.15:0,48,573	0/0:21,0:21:57.17:0,57,678	0/0:26,0:26:72.22:0,72,863	0/0:20,0:20:54.15:0,54,634	0/0:24,0:24:69.21:0,69,827	0/0:27,0:27:72.22:0,72,864	0/0:23,0:23:66.20:0,66,792	0/0:20,0:20:57.17:0,57,681	0/0:21,0:21:57.17:0,57,683	0/0:21,0:21:54.17:0,54,647	0/0:38,0:38:99:0,99,1172	0/0:25,0:25:72.22:0,72,863	0/0:22,0:22:63.19:0,63,756	0/0:21,0:21:63.18:0,63,742	0/0:21,0:20:60.18:0,60,717	1/1:5,19:24:66.21:892,66,0	0/0:27,0:27:75.16:0,75,859	1/1:0,4:4:12.04:165,12,0
chr10	100090321	.	ATGTGTGTGTGTGTGTGTGTGTG	A	2224.94	PASS	AB=0.981;AC=14;AF=0.259;AN=54;BaseQRankSum=6.133;DP=418;FS=1.836;HRun=0;HaplotypeScore=203.3425;InbreedingCoeff=0.6420;MQ=66.28;MQ0=24;MQRankSum=-5.122;QD=19.87;ReadPosRankSum=2.685;VQSLOD=2.8267;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:25:99:136,0,217	0/0:8,0:8:12.04:0,12,850	0/0:43,0:18:6.02:0,6,112	0/0:52,0:25:11.11:0,11,176	0/0:9,0:9:18.06:0,18,1560	0/0:19,0:19:25.64:0,26,1471	0/1:14,0:14:90.85:91,0,111	0/0:23,0:23:26.45:0,26,903	1/1:4,2:5:6.02:348,6,0	0/0:5,0:5:15.05:0,15,952	0/0:10,0:10:9.03:0,9,902	0/0:11,0:11:12.04:0,12,966	0/0:13,0:13:14.59:0,15,1199	0/0:14,0:13:24.08:0,24,1486	0/0:8,0:7:6.80:0,7,371	0/0:9,0:8:18.06:0,18,1491	0/0:30,0:28:41.16:0,41,3116	1/1:7,0:6:9.03:120,9,0	1/1:15,4:15:14.26:246,14,0	1/1:5,3:8:6.02:343,6,0	1/1:18,0:16:5.98:59,6,0	0/0:9,0:8:15.05:0,15,874	0/0:8,0:8:12.04:0,12,1085	0/0:14,0:13:11.47:0,11,697	0/0:11,0:12:24.08:0,24,2337	0/0:9,0:8:12.02:0,12,295	1/1:7,8:15:20.56:1052,21,0	./.
chr10	100090471	.	CT	C	1116.42	PASS	AB=0.563;AC=9;AF=0.161;AN=56;BaseQRankSum=7.227;DP=258;FS=0.654;HRun=6;HaplotypeScore=36.1742;InbreedingCoeff=0.6277;MQ=71.39;MQ0=2;MQRankSum=-4.497;QD=21.47;ReadPosRankSum=-1.899;VQSLOD=2.0533;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,7:8:21.05:225,21,0	0/0:1,0:1:3.01:0,3,39	0/0:11,0:8:21.26:0,21,177	0/0:5,0:4:9.03:0,9,106	0/0:11,0:11:33.11:0,33,432	0/0:15,0:15:42.12:0,42,538	1/1:0,3:3:6.02:64,6,0	1/1:7,23:30:69.08:710,69,0	0/0:6,0:6:18.06:0,18,238	0/0:6,0:6:15.05:0,15,197	0/0:9,0:9:27.08:0,27,342	0/0:4,0:4:9.03:0,9,118	0/0:4,0:4:12.04:0,12,158	0/0:5,0:5:15.05:0,15,195	0/0:2,0:2:6.02:0,6,79	0/0:4,0:4:12.03:0,12,143	0/0:31,0:31:52.38:0,52,1034	0/0:23,0:22:39.13:0,39,510	0/0:13,0:12:30.08:0,30,374	0/0:12,0:12:30.10:0,30,394	0/0:2,0:2:3.01:0,3,39	0/0:1,0:1:3.01:0,3,39	0/0:6,0:6:15.04:0,15,183	0/0:3,0:3:9.03:0,9,118	0/0:18,0:18:36.12:0,36,470	0/1:2,7:9:15.42:202,0,15	0/0:14,0:14:42.11:0,42,522	1/1:0,2:2:6.02:64,6,0
chr10	100090531	.	CT	C	325.82	PASS	AB=0.625;AC=7;AF=0.130;AN=54;BaseQRankSum=4.107;DP=229;FS=42.226;HRun=9;HaplotypeScore=27.8458;InbreedingCoeff=0.5298;MQ=56.10;MQ0=7;MQRankSum=-5.644;QD=14.17;ReadPosRankSum=-1.235;VQSLOD=0.3127;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:2,3:5:15.14:70,0,15	0/0:4,0:4:9.03:0,9,104	0/0:6,0:3:6.01:0,6,63	0/0:4,0:2:5.80:0,6,41	0/0:7,0:7:15.04:0,15,173	0/0:8,0:8:18.05:0,18,208	./.	1/1:3,12:14:33.01:302,33,0	0/0:3,0:2:6.02:0,6,67	0/0:6,0:6:15.04:0,15,172	0/0:10,0:8:21.05:0,21,233	0/0:5,0:4:6.01:0,6,61	0/0:2,0:2:6.02:0,6,69	0/0:4,0:4:11.99:0,12,124	0/0:7,0:6:15.04:0,15,173	0/0:3,0:3:6.01:0,6,59	0/0:34,0:34:84.24:0,84,960	0/0:30,0:29:54.15:0,54,614	0/0:14,0:8:15.04:0,15,173	0/0:12,0:11:26.87:0,27,290	0/0:6,0:6:16.29:0,16,176	0/0:2,0:2:6.02:0,6,69	0/0:9,0:9:23.77:0,24,268	0/0:5,0:5:15.04:0,15,173	0/0:11,0:11:30.08:0,30,338	1/1:1,0:1:3:27,3,0	0/0:12,0:10:21.06:0,21,242	1/1:0,2:2:6:55,6,0
chr10	100093239	.	TTG	T	6008.21	PASS	AB=0.923;AC=21;AF=0.375;AN=56;BaseQRankSum=14.306;DP=766;FS=0.000;HRun=0;HaplotypeScore=93.1414;InbreedingCoeff=0.9327;MQ=70.33;MQ0=1;MQRankSum=0.441;QD=22.17;ReadPosRankSum=0.622;VQSLOD=4.7024;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:60.10:0,60,911	0/0:10,0:10:30.10:0,30,488	0/0:28,0:27:51.38:0,51,868	0/0:28,0:26:52.10:0,52,771	0/0:30,3:33:35.56:0,36,1330	0/0:21,1:22:20.31:0,20,818	1/1:3,11:14:18.06:221,18,0	1/1:11,22:33:67.56:766,68,0	1/1:2,27:31:68.84:802,69,0	0/0:35,0:35:86.27:0,86,1298	0/0:27,0:27:72.19:0,72,1065	0/0:28,0:28:69.24:0,69,1120	0/0:47,0:47:99:0,120,1945	0/0:32,1:33:50.38:0,50,1273	0/0:30,0:30:84.22:0,84,1266	0/0:35,0:35:81.26:0,81,1283	0/0:31,0:31:78.05:0,78,1214	1/1:6,22:30:39.25:613,39,0	1/1:5,16:22:50.95:566,51,0	1/1:0,18:19:53.96:624,54,0	1/1:4,21:25:51.16:627,51,0	0/0:26,0:26:75.22:0,75,1170	0/1:22,2:24:7.65:8,0,834	0/0:28,0:28:72.21:0,72,1117	0/0:28,0:28:69.22:0,69,1092	1/1:6,18:25:56.73:641,57,0	1/1:9,26:35:63.20:772,63,0	1/1:2,10:11:30.09:369,30,0
chr10	100095125	.	TTC	T	168.53	PASS	AB=0.923;AC=5;AF=0.104;AN=48;BaseQRankSum=5.510;DP=346;FS=3.653;HRun=0;HaplotypeScore=45.7601;InbreedingCoeff=-0.1578;MQ=58.53;MQ0=32;MQRankSum=-4.452;QD=0.79;ReadPosRankSum=-2.213;VQSLOD=1.0722;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:14,8:19:99:182,0,252	0/0:2,0:2:3.01:0,3,61	0/1:60,0:11:25.34:25,0,95	0/1:107,1:23:12.79:13,0,335	0/0:2,0:2:3.01:0,3,61	0/0:7,0:6:18.06:0,18,361	0/0:15,2:13:22.55:0,23,441	0/1:10,1:9:40.98:41,0,172	0/0:10,0:8:24.07:0,24,450	0/0:7,0:7:20.99:0,21,349	0/0:2,0:2:6.02:0,6,122	0/0:4,0:4:9.01:0,9,182	./.	0/0:7,0:6:9.02:0,9,147	0/0:4,0:3:9.03:0,9,182	0/0:8,0:7:21.07:0,21,423	0/0:6,0:5:12.04:0,12,189	0/0:9,0:8:9.23:0,9,306	0/0:10,0:7:21.07:0,21,380	0/0:4,0:4:9.03:0,9,181	0/0:13,0:12:27.07:0,27,506	0/0:7,0:6:18.06:0,18,363	./.	0/0:8,0:7:21.06:0,21,391	0/0:4,0:4:12.04:0,12,226	0/1:9,0:7:18.48:18,0,170	./.	./.
chr10	100096092	.	T	TC	1135.43	PASS	AB=0.725;AC=8;AF=0.143;AN=56;BaseQRankSum=8.395;DP=564;FS=9.494;HRun=7;HaplotypeScore=85.3120;InbreedingCoeff=0.4769;MQ=62.93;MQ0=9;MQRankSum=-0.296;QD=11.02;ReadPosRankSum=-5.328;VQSLOD=0.5601;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:32.75:0,33,316	0/0:7,0:7:15.01:0,15,139	0/0:33,0:24:29.24:0,29,360	0/0:22,0:14:21.03:0,21,202	0/0:11,0:11:21.02:0,21,203	0/0:10,0:9:17.88:0,18,173	0/0:32,0:32:42.04:0,42,403	0/0:25,0:25:48.05:0,48,459	1/1:10,8:18:17.25:282,17,0	0/0:28,0:28:63.08:0,63,608	0/0:11,0:11:21.02:0,21,202	0/0:15,0:14:30.04:0,30,289	0/0:14,0:14:39.06:0,39,376	0/0:31,0:30:68.39:0,68,665	0/0:30,0:30:62.35:0,62,595	0/0:25,1:26:58.68:0,59,576	0/0:26,0:26:60.01:0,60,564	0/1:5,8:11:9.64:137,0,10	0/1:8,7:13:9.74:164,0,10	0/1:19,1:20:1.49:139,0,1	0/1:10,12:20:22.41:273,0,22	0/0:17,0:17:45.07:0,45,434	0/0:16,0:16:26.79:0,27,260	0/0:35,0:34:66.08:0,66,637	0/0:14,0:14:33.05:0,33,318	0/0:19,0:19:45.07:0,45,434	1/1:9,6:15:4.55:279,5,0	0/0:12,0:11:33.05:0,33,317
chr10	100096101	.	CTG	C	205.65	PASS	AB=0.901;AC=20;AF=0.400;AN=50;BaseQRankSum=5.257;DP=595;FS=2.900;HRun=0;HaplotypeScore=94.9858;InbreedingCoeff=0.1702;MQ=56.72;MQ0=17;MQRankSum=-0.106;QD=0.67;ReadPosRankSum=0.176;VQSLOD=1.8839;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:33:2.79:14,3,0	0/0:7,0:6:3.47:0,3,27	./.	./.	0/1:11,3:14:16.65:17,0,70	0/0:10,0:10:12.02:0,12,152	1/1:17,0:25:14.20:70,14,0	0/0:22,0:21:10.64:0,11,60	0/1:12,0:13:0:0,0,0	0/0:27,0:27:15.04:0,15,197	0/1:7,1:9:33.20:46,0,33	0/0:17,0:15:14.98:0,15,158	0/0:17,0:17:3:0,3,31	0/1:31,3:33:11.71:12,0,190	0/0:25,0:34:26.99:0,27,264	0/1:27,1:29:58.50:59,0,137	0/1:31,2:33:7.53:8,0,538	1/1:14,0:13:4.77:28,5,0	./.	1/1:11,0:17:2.88:15,3,0	1/1:28,2:25:4.23:33,4,0	0/0:26,0:26:3.94:0,4,223	0/1:17,0:17:15.64:16,0,144	0/0:34,0:33:16.91:0,17,577	0/1:17,4:21:27.70:28,0,70	0/0:22,0:22:26.68:0,27,189	1/1:14,0:16:2.87:15,3,0	0/0:10,0:11:18:0,18,182
chr10	100097028	.	T	TGAAAA	21132.38	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-6.742;DP=718;FS=6.004;HRun=0;HaplotypeScore=135.2584;InbreedingCoeff=0.9994;MQ=78.93;MQ0=0;MQRankSum=-14.076;QD=82.87;ReadPosRankSum=-1.140;VQSLOD=6.6948;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,32:41:99:3408,105,0	0/0:7,0:7:21.07:0,21,489	0/0:16,0:16:48.14:0,48,1024	0/0:24,0:24:61.68:0,62,1157	0/0:25,0:25:75.26:0,75,1721	0/0:22,0:22:63.22:0,63,1468	1/1:3,21:27:60.21:1953,60,0	1/1:7,14:25:69.21:2085,69,0	1/1:4,9:13:39.13:1234,39,0	0/0:41,0:41:99:0,117,2668	0/0:17,0:17:48.16:0,48,1118	0/0:35,0:35:99:0,105,2360	0/0:32,0:32:93.32:0,93,2145	0/0:28,0:28:84.26:0,84,1864	0/0:26,0:26:72.23:0,72,1633	0/0:24,0:24:66.20:0,66,1428	0/0:41,0:41:99:0,123,2732	1/1:1,27:29:80.86:2696,81,0	1/1:3,8:15:39.13:1178,39,0	1/1:3,12:17:48.16:1414,48,0	1/1:6,28:35:90.31:2645,90,0	0/0:28,0:28:84.29:0,84,1917	0/0:22,0:22:66.23:0,66,1538	0/0:49,1:50:50.99:0,51,3204	0/0:25,0:25:75.23:0,75,1657	1/1:2,12:15:42.13:1298,42,0	1/1:0,20:21:57.20:1852,57,0	1/1:3,12:17:45.15:1370,45,0
chr10	100100331	.	GA	G	1275.63	PASS	AB=0.954;AC=11;AF=0.196;AN=56;BaseQRankSum=5.987;DP=588;FS=4.335;HRun=12;HaplotypeScore=75.7600;InbreedingCoeff=0.6662;MQ=85.15;MQ0=2;MQRankSum=1.040;QD=6.86;ReadPosRankSum=-0.108;VQSLOD=2.4635;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:23:39.65:129,40,0	0/0:7,0:7:21.04:0,21,213	0/1:47,2:34:2.68:3,0,288	0/1:29,0:21:7.38:7,0,62	0/0:3,0:26:66.14:0,66,381	0/0:8,0:27:60.26:0,60,357	0/0:10,1:11:6.81:0,7,243	1/1:4,29:36:89.70:659,90,0	0/0:20,0:22:46.95:0,47,462	0/0:28,1:31:42.37:0,42,599	0/0:29,1:30:52.63:0,53,656	0/0:9,0:10:26.89:0,27,258	0/0:16,1:17:27.84:0,28,447	0/0:11,0:12:9.69:0,10,261	0/0:11,0:12:32.88:0,33,310	0/0:2,0:13:28.57:0,29,159	0/0:28,1:30:57.18:0,57,663	0/0:23,2:25:3.95:0,4,364	0/0:13,1:14:12.83:0,13,307	0/0:22,0:23:50.49:0,50,463	0/1:8,1:9:5.21:5,0,129	0/0:15,0:15:39.07:0,39,390	0/0:18,3:21:12.82:0,13,305	0/0:9,0:9:27.03:0,27,261	0/0:21,1:23:36.68:0,37,524	1/1:7,19:26:29.24:398,29,0	0/0:23,1:24:45.82:0,46,622	1/1:0,12:13:31.92:238,32,0
chr10	100100619	.	GC	G	905.42	PASS	AB=0.893;AC=28;AF=0.500;AN=56;BaseQRankSum=2.408;DP=338;FS=37.158;HRun=13;HaplotypeScore=49.2165;InbreedingCoeff=0.4014;MQ=83.57;MQ0=1;MQRankSum=1.053;QD=4.08;ReadPosRankSum=5.332;VQSLOD=-0.4890;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:31:52.96:155,53,0	1/1:3,1:4:2.94:22,3,0	0/1:17,1:16:25.01:25,0,46	0/1:17,0:16:10.63:11,0,81	1/1:7,1:10:3.98:12,4,0	1/1:9,2:11:2.91:22,3,0	0/0:14,0:14:8.91:0,9,64	1/1:8,5:14:10.87:71,11,0	0/0:7,0:8:14.24:0,14,92	0/0:8,0:8:2.96:0,3,19	1/1:12,1:13:1.96:19,2,0	0/0:5,0:5:0:0,0,0	0/1:5,1:7:15.57:20,0,16	0/0:7,1:8:8.99:0,9,78	1/1:6,3:9:8.88:66,9,0	1/1:4,11:20:42.97:269,43,0	1/1:7,11:21:18.45:106,18,0	0/0:4,0:11:4.22:0,4,24	0/0:7,0:7:3:0,3,29	0/0:9,1:10:2.97:0,3,24	0/0:10,0:10:6.26:0,6,42	0/0:11,0:12:5.14:0,5,71	1/1:4,4:8:11.92:87,12,0	1/1:8,9:17:17.83:131,18,0	0/1:9,2:11:12.88:13,0,45	1/1:7,2:10:7.96:50,8,0	0/0:15,0:20:8.62:0,9,59	0/0:3,0:3:0:0,0,0
chr10	100100862	.	T	TGA	1873.33	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.868;DP=693;FS=0.000;HRun=0;HaplotypeScore=87.7328;InbreedingCoeff=0.9916;MQ=82.47;MQ0=0;MQRankSum=-0.573;QD=49.30;ReadPosRankSum=0.373;VQSLOD=4.2861;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,184,2953	0/0:7,0:7:18.06:0,18,294	0/0:26,0:26:72.24:0,72,1125	0/0:17,0:17:35.96:0,36,641	0/0:20,0:20:57.16:0,57,881	0/0:24,0:24:66.14:0,66,969	1/1:1,36:38:99:1968,99,0	0/0:21,0:21:60.20:0,60,956	0/0:33,0:33:93.29:0,93,1463	0/0:26,0:26:78.27:0,78,1267	0/0:13,0:13:39.13:0,39,636	0/0:26,0:26:78.27:0,78,1264	0/0:16,0:16:48.15:0,48,758	0/0:32,0:32:96.06:0,96,1524	0/0:38,0:38:99:0,111,1785	0/0:23,0:23:69.24:0,69,1125	0/0:38,0:37:99:0,114,1853	0/0:16,0:16:48.14:0,48,755	0/0:23,0:23:66.22:0,66,1056	0/0:26,0:26:78.27:0,78,1269	0/0:26,0:26:75.23:0,75,1167	0/0:19,0:19:57.18:0,57,900	0/0:14,0:14:42.10:0,42,632	0/0:30,0:30:87.30:0,87,1419	0/0:23,0:23:69.20:0,69,1068	0/0:20,0:20:59.94:0,60,940	0/0:25,0:25:75.24:0,75,1193	0/0:11,0:11:33.08:0,33,485
chr10	100102065	.	CT	C	281.74	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.644;DP=640;FS=2.565;HRun=2;HaplotypeScore=85.6754;InbreedingCoeff=0.9976;MQ=67.75;MQ0=0;MQRankSum=-8.062;QD=7.04;ReadPosRankSum=-0.929;VQSLOD=0.5568;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,16:25:38.60:218,39,0	0/0:7,0:7:21.06:0,21,295	0/0:32,0:31:93.02:0,93,1295	0/0:24,0:23:60.18:0,60,848	0/0:24,0:24:72.24:0,72,1079	0/0:29,0:29:87.29:0,87,1283	1/1:5,10:15:31.99:185,32,0	0/0:36,0:36:99:0,102,1489	0/0:25,0:25:75.22:0,75,1066	0/0:23,0:23:66.22:0,66,989	0/0:16,0:16:45.14:0,45,656	0/0:17,0:17:51.17:0,51,764	0/0:15,0:15:45.14:0,45,653	0/0:20,0:20:60.20:0,60,899	0/0:19,0:19:57.18:0,57,832	0/0:14,0:14:42.13:0,42,611	0/0:41,0:41:99:0,114,1685	0/0:27,0:26:78.19:0,78,1100	0/0:29,0:27:78.21:0,78,1107	0/0:23,0:23:69.18:0,69,955	0/0:38,0:38:99:0,114,1643	0/0:17,0:17:51.17:0,51,762	0/0:26,0:26:78.24:0,78,1113	0/0:20,0:20:57.15:0,57,829	0/0:26,0:26:78.26:0,78,1169	0/0:16,0:16:48.16:0,48,700	0/0:24,0:24:72.19:0,72,982	0/0:12,0:12:36.08:0,36,479
chr10	100102068	.	C	CAAGG	1525.59	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.576;DP=621;FS=2.572;HRun=0;HaplotypeScore=117.0836;InbreedingCoeff=0.9975;MQ=69.76;MQ0=0;MQRankSum=-8.184;QD=52.61;ReadPosRankSum=-1.011;VQSLOD=4.1602;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:19:51.17:1014,51,0	0/0:7,0:7:21.07:0,21,440	0/0:34,0:33:93.32:0,93,1867	0/0:23,0:23:60.21:0,60,1136	0/0:24,0:24:72.22:0,72,1434	0/0:30,0:30:87.30:0,87,1821	1/1:0,10:10:30.10:633,30,0	0/0:33,0:33:93.32:0,93,1942	0/0:25,0:25:75.23:0,75,1482	0/0:25,0:25:69.19:0,69,1371	0/0:15,0:15:45.14:0,45,907	0/0:18,0:18:54.19:0,54,1115	0/0:15,0:15:45.15:0,45,944	0/0:20,0:20:60.21:0,60,1259	0/0:17,0:17:51.18:0,51,1070	0/0:14,0:14:42.13:0,42,843	0/0:39,0:39:99:0,111,2323	0/0:27,0:26:78.27:0,78,1598	0/0:30,0:29:84.27:0,84,1708	0/0:23,0:23:69.21:0,69,1362	0/0:37,0:37:99:0,111,2289	0/0:18,0:18:51.18:0,51,1070	0/0:24,0:24:72.25:0,72,1491	0/0:19,0:19:54.17:0,54,1093	0/0:26,0:26:78.27:0,78,1617	0/0:16,0:16:48.16:0,48,970	0/0:21,0:21:60.19:0,60,1220	0/0:12,0:12:36.12:0,36,755
chr10	100102660	.	A	ACTT	2722.75	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.982;DP=606;FS=0.561;HRun=0;HaplotypeScore=88.5075;InbreedingCoeff=0.9947;MQ=67.98;MQ0=3;MQRankSum=-7.461;QD=57.93;ReadPosRankSum=-1.525;VQSLOD=5.2267;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:66.22:1429,66,0	0/0:8,0:8:21.07:0,21,350	0/0:21,0:18:36.03:0,36,686	0/0:15,0:14:34.35:0,34,495	0/0:28,0:28:75.26:0,75,1246	0/0:13,0:13:39.13:0,39,650	1/1:3,19:22:66.19:1415,66,0	0/0:33,0:31:93.30:0,93,1499	0/0:20,0:20:60.21:0,60,999	0/0:28,0:28:75.25:0,75,1222	0/0:22,0:22:60.18:0,60,968	0/0:20,0:20:60.20:0,60,992	0/0:21,0:21:60.19:0,60,971	0/0:21,0:21:60.18:0,60,941	0/0:21,0:21:63.20:0,63,1024	0/0:17,0:17:21.45:0,21,764	0/0:31,0:31:81.24:0,81,1296	0/0:20,0:20:57.19:0,57,949	0/0:18,0:16:45.14:0,45,718	0/0:28,0:28:84.29:0,84,1398	0/0:15,0:15:42.14:0,42,700	0/0:22,0:22:66.19:0,66,1048	0/0:22,0:22:66.23:0,66,1097	0/0:23,0:23:63.22:0,63,1044	0/0:32,0:32:93.32:0,93,1537	0/0:31,0:31:84.29:0,84,1394	0/0:21,0:21:60.21:0,60,1000	0/0:8,0:8:24.08:0,24,382
chr10	100102852	.	AT	A	565.04	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.372;DP=567;FS=4.804;HRun=9;HaplotypeScore=59.3054;InbreedingCoeff=0.9818;MQ=62.14;MQ0=0;MQRankSum=-0.775;QD=17.66;ReadPosRankSum=0.648;VQSLOD=3.7711;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:21:51.03:466,51,0	0/0:9,0:9:15.04:0,15,173	0/0:13,0:11:24.06:0,24,264	0/0:18,0:15:32.99:0,33,320	0/0:22,1:23:35.71:0,36,655	0/0:17,0:17:42.12:0,42,485	1/1:1,10:11:24.01:220,24,0	0/0:25,0:25:60.17:0,60,684	0/0:16,0:16:45.13:0,45,519	0/0:20,0:20:60.16:0,60,678	0/0:18,0:18:51.15:0,51,589	0/0:24,0:24:66.20:0,66,762	0/0:19,0:19:54.16:0,54,623	0/0:14,0:14:42.12:0,42,485	0/0:22,0:22:63.19:0,63,727	0/0:18,1:19:26.72:0,27,561	0/0:21,0:21:54.16:0,54,623	0/0:26,0:26:63.14:0,63,694	0/0:27,0:26:69.20:0,69,796	0/0:33,0:33:90.27:0,90,1038	0/0:8,0:8:21.06:0,21,242	0/0:25,0:25:72.21:0,72,831	0/0:34,0:34:90.25:0,90,1029	0/0:26,0:26:69.21:0,69,796	0/0:26,0:26:66.20:0,66,762	0/0:21,1:22:17.50:0,17,437	0/0:18,0:18:51.15:0,51,588	0/0:11,0:11:27.08:0,27,312
chr10	100104516	.	C	CTG	1452.91	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.352;DP=675;FS=9.807;HRun=0;HaplotypeScore=79.5877;InbreedingCoeff=0.9880;MQ=91.98;MQ0=0;MQRankSum=-3.584;QD=48.43;ReadPosRankSum=1.910;VQSLOD=4.1755;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:81.28:1548,81,0	0/0:7,0:7:18.01:0,18,226	0/0:24,0:24:69.23:0,69,1001	0/0:31,0:31:80.40:0,80,1083	0/0:25,0:25:75.23:0,75,1124	0/0:15,0:15:44.93:0,45,634	0/0:29,0:29:87.25:0,87,1267	0/0:32,0:32:90.28:0,90,1303	0/0:23,0:23:66.21:0,66,989	0/0:22,0:22:66.21:0,66,974	0/0:8,0:8:21.07:0,21,321	0/0:25,0:25:66.21:0,66,986	0/0:24,0:24:69.21:0,69,1055	0/0:14,0:14:42.13:0,42,622	0/0:29,0:29:87.27:0,87,1289	0/0:19,0:19:51.16:0,51,760	0/0:33,0:33:96.09:0,96,1336	0/0:16,0:16:48.08:0,48,664	0/0:33,0:33:84.25:0,84,1235	0/0:26,0:26:78.26:0,78,1193	0/0:37,0:37:99:0,108,1631	0/0:29,0:29:87.24:0,87,1264	0/0:23,0:23:69.17:0,69,1007	0/0:29,0:29:87.24:0,87,1265	0/0:27,0:27:78.26:0,78,1193	0/0:22,0:22:66.22:0,66,1010	0/0:24,0:24:72.14:0,72,1050	0/0:19,0:19:48.12:0,48,683
chr10	100104918	.	G	GA	1815.27	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.211;DP=638;FS=0.565;HRun=1;HaplotypeScore=82.2260;InbreedingCoeff=0.9988;MQ=87.62;MQ0=0;MQRankSum=-3.222;QD=34.91;ReadPosRankSum=0.717;VQSLOD=3.6215;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:99:1513,105,0	0/0:14,0:14:39.10:0,39,473	0/0:37,0:36:79.87:0,80,923	0/0:40,0:37:90.02:0,90,1027	0/0:20,0:20:54.07:0,54,636	0/0:23,0:23:63.19:0,63,804	1/1:0,15:15:30.06:424,30,0	0/0:30,0:30:81.20:0,81,968	0/0:11,0:11:29.19:0,29,330	0/0:26,0:26:78.25:0,78,1000	0/0:11,0:11:27.04:0,27,331	0/0:15,0:15:45.15:0,45,582	0/0:21,0:21:54.15:0,54,684	0/0:18,0:18:51.15:0,51,647	0/0:26,0:26:63.18:0,63,790	0/0:14,0:14:42.10:0,42,502	0/0:30,0:29:87.16:0,87,1046	0/0:17,0:17:51:0,51,572	0/0:21,0:21:63.16:0,63,776	0/0:28,0:28:75.23:0,75,957	0/0:28,0:28:78.20:0,78,966	0/0:21,0:21:60.14:0,60,722	0/0:20,0:20:54.14:0,54,659	0/0:25,0:25:65.75:0,66,809	0/0:23,0:23:69.19:0,69,861	0/0:24,0:24:66.21:0,66,843	0/0:28,0:28:84.27:0,84,1083	0/0:15,0:15:39.11:0,39,490
chr10	100105022	.	C	CA	184.06	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.924;DP=496;FS=1.043;HRun=8;HaplotypeScore=71.8277;InbreedingCoeff=0.6466;MQ=59.19;MQ0=15;MQRankSum=1.481;QD=7.08;ReadPosRankSum=0.072;VQSLOD=0.8356;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:1.28:1,0,3	0/0:2,0:1:1.25:0,1,3	0/0:22,0:11:26.99:0,27,238	0/0:13,0:8:2.91:0,3,78	0/0:17,0:16:35.88:0,36,329	0/0:15,0:14:27.01:0,27,246	1/1:1,9:10:24.07:277,24,0	0/0:30,0:28:69:0,69,624	0/0:15,0:14:35.93:0,36,311	0/0:23,0:23:56.99:0,57,512	0/0:13,0:13:33.01:0,33,302	0/0:18,1:19:16.59:0,17,398	0/0:14,0:14:30.01:0,30,274	0/0:10,0:9:17.99:0,18,160	0/0:33,0:33:87.04:0,87,794	0/0:15,0:15:36.01:0,36,329	0/0:18,0:17:48.02:0,48,438	0/0:16,0:15:32.03:0,32,277	0/0:28,0:20:53.89:0,54,467	0/0:20,0:20:41.76:0,42,361	0/0:17,0:17:38.94:0,39,338	0/0:13,0:13:32.05:0,32,278	0/0:29,0:29:71.68:0,72,676	0/0:20,0:20:35.85:0,36,326	0/0:15,0:15:35.93:0,36,318	0/0:23,3:26:12.81:0,13,516	0/0:21,0:21:47.90:0,48,415	0/0:6,0:6:8.03:0,8,58
chr10	100105058	.	C	CTAGAAAT	2782.86	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.770;DP=515;FS=0.705;HRun=0;HaplotypeScore=130.7046;InbreedingCoeff=0.9018;MQ=85.45;MQ0=0;MQRankSum=-7.395;QD=86.96;ReadPosRankSum=-2.429;VQSLOD=3.6806;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,19:32:84.05:2878,84,0	0/0:3,0:2:5.93:0,6,98	0/0:22,0:22:60.19:0,60,1491	0/0:25,0:25:58.46:0,58,1490	0/0:11,0:11:30.10:0,30,807	0/0:16,0:16:48.13:0,48,1180	0/0:20,0:20:57.18:0,57,1480	0/0:28,0:28:78.24:0,78,1991	0/0:17,0:17:48.16:0,48,1288	0/0:25,0:25:72.08:0,72,1795	0/0:18,0:18:51.16:0,51,1289	0/0:17,0:17:51.09:0,51,1254	0/0:16,0:16:48.10:0,48,1230	0/0:16,0:16:45.05:0,45,1093	0/0:31,0:31:87.28:0,87,2258	0/0:16,0:16:45.09:0,45,1150	0/0:23,0:23:60.19:0,60,1560	0/0:15,0:14:42.14:0,42,1099	0/0:13,0:13:39.13:0,39,1016	0/0:19,0:19:51.17:0,51,1311	0/0:21,0:21:63.19:0,63,1638	0/0:12,0:12:27.09:0,27,727	0/0:27,0:26:81.26:0,81,2126	0/0:16,0:16:39.05:0,39,931	0/0:12,0:12:36.12:0,36,928	0/0:22,0:22:66.20:0,66,1669	0/0:10,0:10:30.10:0,30,808	0/0:12,0:12:33.11:0,33,832
chr10	100105261	.	G	GCTCTCTCTCTCTCT	1304.24	PASS	AB=0.963;AC=13;AF=0.241;AN=54;BaseQRankSum=-0.120;DP=496;FS=6.962;HRun=0;HaplotypeScore=179.4791;InbreedingCoeff=0.3948;MQ=69.26;MQ0=18;MQRankSum=-2.029;QD=7.45;ReadPosRankSum=-2.180;VQSLOD=1.6983;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,5:21:0:0,0,0	0/0:6,0:4:6.02:0,6,214	0/0:23,0:17:3.01:0,3,68	0/0:34,0:24:5:0,5,66	0/0:14,0:14:6.02:0,6,151	0/1:13,0:13:14.94:15,0,193	0/1:33,0:32:67.42:143,0,67	0/1:39,0:38:3.57:4,0,69	1/1:13,0:13:15.88:314,16,0	0/0:12,0:12:6.02:0,6,209	0/0:7,0:7:9.03:0,9,325	0/0:17,0:17:21.06:0,21,659	0/0:15,0:14:9.45:0,9,234	0/0:13,0:12:6.49:0,6,224	0/0:18,0:18:18.06:0,18,640	0/0:20,0:20:30.07:0,30,876	0/0:25,0:23:24.08:0,24,839	1/1:4,0:3:3.01:85,3,0	1/1:17,0:16:22.08:450,22,0	./.	0/0:32,0:33:0.84:0,1,2	0/0:12,0:12:6.02:0,6,233	0/0:10,0:9:9.03:0,9,262	0/1:15,0:14:1.73:2,0,444	0/0:17,0:17:8.70:0,9,240	0/0:12,0:11:6.20:0,6,215	1/1:19,0:18:20.98:441,21,0	0/0:11,0:11:13.55:0,14,512
chr10	100105297	.	TCACACA	T	306.63	PASS	AB=0.970;AC=10;AF=0.238;AN=42;BaseQRankSum=-0.596;DP=372;FS=19.729;HRun=0;HaplotypeScore=79.3237;InbreedingCoeff=0.2889;MQ=41.48;MQ0=38;MQRankSum=0.159;QD=2.71;ReadPosRankSum=-0.445;VQSLOD=0.0932;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:0:0,0,0	./.	./.	./.	./.	0/0:12,0:11:9.03:0,9,200	0/1:24,0:23:0.23:0,0,0	./.	0/1:14,0:13:40.67:90,0,41	0/0:15,0:14:20.98:0,21,355	./.	0/0:12,0:11:3.01:0,3,74	0/0:13,0:12:12.01:0,12,199	0/0:13,0:12:3.48:0,3,43	0/0:14,0:12:21.06:0,21,474	0/0:18,0:17:15.24:0,15,356	0/0:20,0:17:20.77:0,21,464	0/1:10,0:8:3.08:107,0,3	./.	1/1:7,3:10:3.01:55,3,0	1/1:21,0:15:3.01:59,3,0	0/0:9,0:8:6.02:0,6,127	0/0:16,0:12:5.72:0,6,123	0/0:27,0:23:18.06:0,18,432	1/1:13,0:13:0.07:0,0,0	0/0:11,0:10:15.05:0,15,284	0/1:18,1:17:55.96:105,0,56	0/0:7,0:7:7.57:0,8,183
chr10	100105376	.	GC	G	351.35	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.407;DP=422;FS=4.517;HRun=3;HaplotypeScore=51.0132;InbreedingCoeff=0.9341;MQ=103.76;MQ0=0;MQRankSum=-2.278;QD=27.03;ReadPosRankSum=0.208;VQSLOD=2.5295;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:48.16:0,48,691	0/0:4,0:4:12.04:0,12,173	0/0:33,0:32:96.25:0,96,1326	0/0:28,0:28:73.49:0,73,1033	0/0:8,0:8:24.07:0,24,326	0/0:21,0:21:57.17:0,57,801	0/0:17,0:17:48.16:0,48,691	0/0:18,0:18:54.17:0,54,761	1/1:0,13:13:36.11:446,36,0	0/0:16,0:16:45.14:0,45,619	0/0:9,0:9:27.09:0,27,388	0/0:13,0:13:39.13:0,39,560	0/0:10,0:10:30.09:0,30,413	0/0:4,0:4:12.04:0,12,171	0/0:9,0:9:27.09:0,27,389	0/0:18,0:18:54.18:0,54,776	0/0:11,0:11:30.10:0,30,427	0/0:9,0:9:27:0,27,342	0/0:16,0:16:45.08:0,45,588	0/0:13,0:13:30.10:0,30,432	0/0:27,0:27:66.06:0,66,948	0/0:14,0:14:42.14:0,42,602	0/0:13,0:13:36.09:0,36,497	0/0:25,0:25:72.24:0,72,1036	0/0:14,0:14:39.11:0,39,561	0/0:14,0:14:39.09:0,39,538	0/0:14,0:14:42.14:0,42,603	0/0:8,0:8:24.08:0,24,346
chr10	100105481	.	GA	G	2514.10	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.235;DP=349;FS=2.743;HRun=7;HaplotypeScore=35.9689;InbreedingCoeff=0.9710;MQ=73.09;MQ0=0;MQRankSum=-0.097;QD=23.72;ReadPosRankSum=2.112;VQSLOD=3.2474;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:51.11:520,51,0	0/0:4,0:4:12.03:0,12,139	0/0:8,0:8:20.85:0,21,217	0/0:7,0:7:10.73:0,11,93	0/0:14,0:14:33.11:0,33,415	0/0:8,0:8:21.04:0,21,238	0/0:1,0:10:20.26:0,20,125	0/0:18,0:18:45.13:0,45,555	1/1:1,15:16:42.09:429,42,0	0/0:16,0:16:48.14:0,48,591	0/0:18,0:18:51.16:0,51,641	0/0:9,0:9:24.01:0,24,282	0/0:10,0:10:30.10:0,30,377	0/0:14,0:14:39.12:0,39,490	0/0:8,0:8:24.08:0,24,302	0/0:13,1:14:11.41:0,11,422	0/0:19,0:19:57.17:0,57,705	1/1:4,9:13:27.06:275,27,0	1/1:2,13:15:39.05:387,39,0	1/1:1,12:13:36.08:367,36,0	1/1:0,11:11:27.06:275,27,0	0/0:5,0:5:12.04:0,12,147	0/0:15,0:15:39.12:0,39,479	0/0:11,0:11:27.07:0,27,326	0/0:10,0:10:30.05:0,30,359	0/0:11,0:11:24.08:0,24,302	1/1:0,19:19:45.10:459,45,0	0/0:14,0:14:42.13:0,42,528
chr10	100105708	.	TAC	T	995.41	PASS	AB=0.950;AC=15;AF=0.268;AN=56;BaseQRankSum=2.767;DP=538;FS=8.055;HRun=0;HaplotypeScore=75.6307;InbreedingCoeff=0.8965;MQ=64.92;MQ0=6;MQRankSum=0.091;QD=8.30;ReadPosRankSum=1.488;VQSLOD=1.9280;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:36.06:0,36,515	0/0:7,0:7:15.02:0,15,220	0/0:26,0:15:32.48:0,32,437	0/0:30,0:20:35.02:0,35,413	0/0:22,0:22:51.12:0,51,732	0/0:26,0:27:68.99:0,69,1023	1/1:13,6:18:27.07:324,27,0	0/0:35,0:35:78.21:0,78,1151	1/1:11,4:13:11.61:149,12,0	0/0:23,0:23:54.17:0,54,855	0/0:13,0:13:21.06:0,21,322	0/0:16,0:16:36.11:0,36,565	0/0:11,0:11:27.07:0,27,412	0/0:18,0:18:51.12:0,51,737	0/0:24,0:24:60.20:0,60,959	0/1:18,1:19:1.36:1,0,502	0/0:20,0:19:43.03:0,43,657	1/1:9,3:10:12.03:138,12,0	1/1:13,2:10:21.01:232,21,0	1/1:8,1:9:9.50:113,10,0	1/1:9,11:15:9.03:112,9,0	0/0:12,0:12:31.33:0,31,468	0/0:22,0:22:42.04:0,42,744	0/0:28,0:28:60.64:0,61,905	0/0:26,1:27:25.71:0,26,947	0/0:22,0:22:48.16:0,48,779	1/1:3,8:10:8.67:112,9,0	0/0:9,0:8:21.06:0,21,318
chr10	100105734	.	CAT	C	360.64	PASS	AB=0.900;AC=9;AF=0.161;AN=56;BaseQRankSum=6.990;DP=532;FS=29.785;HRun=0;HaplotypeScore=83.3728;InbreedingCoeff=-0.1922;MQ=51.99;MQ0=16;MQRankSum=0.143;QD=2.19;ReadPosRankSum=-2.664;VQSLOD=-0.1015;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:21:24.96:25,0,149	0/0:6,0:6:13.29:0,13,213	0/1:15,0:5:9.21:9,0,119	0/0:19,0:6:8.34:0,8,38	0/0:22,0:22:49.33:0,49,786	0/0:29,0:29:74.27:0,74,1220	0/1:23,0:22:60.96:61,0,135	0/0:32,0:31:91.93:0,92,1337	0/1:15,2:15:13.60:14,0,63	0/0:22,0:22:53.13:0,53,836	0/0:8,0:8:21.06:0,21,323	0/0:20,0:19:25.69:0,26,705	0/0:13,0:13:38.29:0,38,565	0/0:19,0:18:53.39:0,53,945	0/0:20,0:20:54.16:0,54,916	0/0:17,0:17:48.80:0,49,751	0/0:23,1:24:44.03:0,44,678	0/1:6,10:14:27.55:28,0,33	0/1:21,1:16:99:119,0,294	0/1:10,2:14:38.58:89,0,39	0/1:24,0:15:30.63:31,0,91	0/0:9,0:8:24.07:0,24,362	0/0:20,0:19:38.73:0,39,831	0/0:34,0:34:61.35:0,61,1216	0/0:25,0:25:61.86:0,62,996	0/0:17,0:17:50.98:0,51,799	0/1:10,2:11:64.03:125,0,64	0/0:10,0:9:27.02:0,27,367
chr10	100105738	.	GAC	G	263.91	PASS	AB=0.943;AC=15;AF=0.278;AN=54;BaseQRankSum=4.872;DP=524;FS=8.399;HRun=0;HaplotypeScore=80.4951;InbreedingCoeff=-0.1849;MQ=51.96;MQ0=18;MQRankSum=-1.085;QD=0.98;ReadPosRankSum=-0.099;VQSLOD=0.8415;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:6.32:0,6,47	0/1:6,0:6:25.29:25,0,82	./.	0/0:14,0:3:3.01:0,3,34	0/1:21,2:23:55.13:55,0,455	0/0:25,2:27:25.52:0,26,762	0/0:23,0:22:7.14:0,7,50	0/1:30,4:34:93.74:94,0,418	0/0:16,0:14:4.41:0,4,46	0/1:21,3:23:19.94:20,0,438	0/0:9,0:9:12.03:0,12,162	0/0:17,0:18:26.26:0,26,354	0/0:12,0:12:6.32:0,6,390	0/0:19,0:18:45.12:0,45,645	0/0:19,0:19:39.07:0,39,549	0/1:16,1:17:1.20:1,0,419	0/1:22,3:24:20.03:20,0,553	1/1:14,0:12:2.96:19,3,0	0/1:22,0:16:12.02:12,0,132	0/1:13,0:13:15.65:25,0,16	0/1:26,0:17:8.78:9,0,33	0/0:9,0:8:6.02:0,6,76	0/0:20,0:19:1.29:0,1,390	0/1:29,6:35:14.49:14,0,657	0/0:25,1:26:13.82:0,14,609	0/1:16,0:16:69.27:69,0,262	1/1:12,0:11:1.46:42,1,0	0/0:11,0:10:3.71:0,4,322
chr10	100106828	.	CATGTG	C	8245.62	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.317;DP=643;FS=0.353;HRun=0;HaplotypeScore=129.1134;InbreedingCoeff=0.9985;MQ=82.15;MQ0=0;MQRankSum=-7.421;QD=45.06;ReadPosRankSum=1.954;VQSLOD=4.6801;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:29:60.21:1181,60,0	0/0:8,0:8:21.07:0,21,632	0/0:14,0:14:33.11:0,33,913	0/0:27,0:27:72.14:0,72,1816	0/0:29,0:29:81.28:0,81,2383	0/0:18,0:18:48.16:0,48,1447	1/1:4,18:22:48.16:966,48,0	0/0:40,0:40:99:0,102,3063	1/1:5,23:28:69.24:1389,69,0	0/0:22,0:22:66.23:0,66,1964	0/0:17,0:17:48.16:0,48,1446	0/0:21,0:21:63.22:0,63,1858	0/0:29,0:29:69.24:0,69,2058	0/0:21,0:21:57.20:0,57,1695	0/0:23,0:23:66.23:0,66,1990	0/0:26,0:26:69.24:0,69,2055	0/0:22,0:22:57.20:0,57,1670	1/1:2,14:16:39.13:785,39,0	1/1:6,11:17:33.09:604,33,0	1/1:3,21:24:60.21:1208,60,0	1/1:3,19:22:48.16:966,48,0	0/0:28,0:28:78.27:0,78,2333	0/0:22,0:22:63.22:0,63,1819	0/0:33,0:33:90.31:0,90,2712	0/0:20,0:20:60.21:0,60,1799	0/0:33,0:33:90.31:0,90,2675	1/1:4,21:25:57.16:1147,57,0	0/0:7,0:7:21.07:0,21,543
chr10	100107828	.	A	AAAG	400.69	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.262;DP=267;FS=1.468;HRun=0;HaplotypeScore=42.1110;InbreedingCoeff=0.5758;MQ=57.97;MQ0=5;MQRankSum=-1.711;QD=28.62;ReadPosRankSum=2.568;VQSLOD=3.3491;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:24.08:494,24,0	0/0:6,0:6:11.72:0,12,175	0/0:25,0:8:18.03:0,18,222	0/0:18,0:5:8.58:0,9,125	0/0:7,0:7:18.06:0,18,268	0/0:5,0:5:9.03:0,9,133	0/0:5,0:5:12:0,12,154	0/0:19,0:19:54.15:0,54,733	0/0:7,0:7:21.07:0,21,303	0/0:6,0:6:12.04:0,12,180	0/0:12,0:12:33.10:0,33,448	0/0:6,0:6:17.97:0,18,218	0/0:11,0:11:30.08:0,30,414	0/0:5,0:4:12.04:0,12,179	0/0:10,0:10:30.04:0,30,392	0/0:8,0:8:24.08:0,24,358	0/0:8,0:8:18.48:0,18,283	0/0:5,0:4:7.36:0,7,132	0/0:12,0:11:33.09:0,33,452	0/0:9,0:9:24.06:0,24,306	0/0:2,0:2:3.01:0,3,44	0/0:8,0:8:21.06:0,21,293	0/0:9,0:9:27.08:0,27,382	0/0:9,0:9:19.12:0,19,242	0/0:13,0:13:36.12:0,36,536	0/0:10,0:10:27.05:0,27,378	0/0:4,0:4:4.67:0,5,124	0/0:14,0:13:39.13:0,39,579
chr10	100109171	.	A	AGTGTGT	3881.66	PASS	AB=0.949;AC=17;AF=0.304;AN=56;BaseQRankSum=7.688;DP=736;FS=2.593;HRun=0;HaplotypeScore=181.9667;InbreedingCoeff=0.7009;MQ=59.05;MQ0=3;MQRankSum=-6.297;QD=13.91;ReadPosRankSum=-3.054;VQSLOD=2.8654;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:18:8.22:140,8,0	0/0:9,0:9:16.30:0,16,298	0/0:26,0:16:4.84:0,5,96	0/1:29,0:20:28.78:29,0,109	0/0:29,0:29:63.16:0,63,1168	0/0:23,0:23:48.14:0,48,920	1/1:29,2:32:31.49:665,31,0	0/1:34,0:33:16.03:16,0,585	1/1:16,15:32:21.07:684,21,0	0/0:48,0:48:99:0,114,2168	0/0:22,0:22:47.98:0,48,858	0/0:28,0:28:69.19:0,69,1285	0/0:22,0:22:19.35:0,19,580	0/0:26,0:26:57.17:0,57,1069	0/0:30,0:30:69.23:0,69,1449	0/0:24,0:24:45.15:0,45,931	0/0:20,0:20:42.14:0,42,835	0/1:9,2:10:20.89:272,0,21	1/1:16,7:24:39.12:938,39,0	1/1:11,17:30:11.91:321,12,0	1/1:39,2:39:15.34:306,15,0	0/0:34,0:34:75.22:0,75,1375	0/0:27,0:27:60.19:0,60,1139	0/0:31,0:31:51.05:0,51,1069	0/0:19,0:20:48.14:0,48,901	0/0:33,0:33:64.41:0,64,1293	1/1:14,11:25:18.06:511,18,0	0/0:4,0:5:12.01:0,12,208
chr10	100109193	.	TGA	T	622.48	PASS	AB=0.965;AC=16;AF=0.286;AN=56;BaseQRankSum=6.446;DP=764;FS=1.026;HRun=0;HaplotypeScore=134.3221;InbreedingCoeff=0.0290;MQ=54.74;MQ0=12;MQRankSum=1.766;QD=1.98;ReadPosRankSum=-4.056;VQSLOD=1.1719;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:19:10.23:75,10,0	0/1:11,1:12:33.16:33,0,225	0/0:29,0:10:12.40:0,12,98	0/0:37,0:16:8.60:0,9,45	0/0:32,0:31:2.49:0,2,524	0/0:27,2:29:39.53:0,40,799	0/0:28,0:28:14.90:0,15,124	0/0:27,0:25:1.54:0,2,312	0/1:33,0:33:57.35:146,0,57	0/0:49,3:51:7.14:0,7,883	0/0:25,0:25:7.89:0,8,266	0/1:30,1:31:9.89:10,0,728	0/0:17,0:17:18.54:0,19,389	0/1:25,1:26:29.56:30,0,652	0/0:31,0:31:51.82:0,52,870	0/1:25,0:25:7.27:7,0,456	0/1:21,2:23:47.56:48,0,449	0/1:14,0:13:9.33:80,0,9	0/1:17,0:14:11.90:14,0,12	1/1:32,0:31:3.41:97,3,0	1/1:33,1:32:5.75:57,6,0	0/0:35,0:35:47.31:0,47,811	0/0:25,3:28:18.32:0,18,695	0/0:34,0:34:62.59:0,63,903	0/1:20,1:22:64.44:64,0,351	0/0:39,0:39:50.55:0,51,763	0/1:23,1:23:8.41:120,0,8	0/0:6,0:6:12:0,12,128
chr10	100109235	.	AGT	A	141.74	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.779;DP=829;FS=1.064;HRun=0;HaplotypeScore=145.9101;InbreedingCoeff=0.9928;MQ=56.19;MQ0=5;MQRankSum=-1.008;QD=7.46;ReadPosRankSum=-0.594;VQSLOD=2.8985;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:18:20.89:234,21,0	0/0:18,0:18:48.13:0,48,744	0/0:45,0:18:35.48:0,35,539	0/0:57,0:29:34.13:0,34,805	0/0:20,0:20:57.17:0,57,945	0/0:27,0:27:72.20:0,72,1136	0/0:23,0:23:57.19:0,57,972	0/0:42,0:42:99:0,120,1867	0/0:27,0:27:60.20:0,60,963	0/0:39,0:39:99:0,102,1665	0/0:17,0:17:51.17:0,51,861	0/0:33,0:33:90.28:0,90,1483	0/0:22,0:22:24.06:0,24,983	0/0:31,0:31:87.28:0,87,1448	0/0:29,0:29:84.20:0,84,1290	0/0:29,0:29:84.29:0,84,1435	0/0:35,0:34:70.32:0,70,1504	0/0:18,0:18:41.98:0,42,834	0/0:19,0:16:45.13:0,45,688	0/0:23,0:23:63.22:0,63,1055	0/0:57,0:55:99:0,105,1744	0/0:38,0:38:99:0,102,1637	0/0:19,0:19:44.79:0,45,733	0/0:47,0:47:99:0,114,1916	0/0:29,0:30:65.07:0,65,1031	0/0:31,0:31:87.29:0,87,1431	0/0:23,0:23:66.23:0,66,1115	0/0:10,0:10:30.08:0,30,480
chr10	100109283	.	A	AGT	404.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.928;DP=881;FS=19.308;HRun=0;HaplotypeScore=135.8527;InbreedingCoeff=0.9979;MQ=56.84;MQ0=5;MQRankSum=-3.329;QD=22.49;ReadPosRankSum=-2.326;VQSLOD=2.4275;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,10:17:30.10:499,30,0	0/0:15,0:15:42.14:0,42,540	0/0:35,0:15:30.61:0,31,462	0/0:35,0:23:37.79:0,38,473	0/0:30,0:31:81.26:0,81,1036	0/0:24,0:24:54.15:0,54,667	0/0:31,0:31:69.21:0,69,870	0/0:40,0:39:90.08:0,90,1098	0/0:34,0:34:87.28:0,87,1120	0/0:37,0:37:99:0,102,1290	0/0:23,0:23:66.21:0,66,843	0/0:27,0:27:69.20:0,69,860	0/0:32,0:32:93.30:0,93,1187	0/0:29,0:29:81.22:0,81,1012	0/0:35,0:35:96.29:0,96,1221	0/0:37,0:37:99:0,99,1260	0/0:31,0:30:75.15:0,75,931	0/0:25,0:25:66.19:0,66,845	0/0:28,0:28:75.24:0,75,965	0/0:31,0:31:75.24:0,75,962	0/0:81,0:80:99:0,189,2347	0/0:30,0:30:84.27:0,84,1081	0/0:21,0:21:51.15:0,51,635	0/0:42,0:42:96.31:0,96,1233	0/0:33,0:33:86.50:0,87,1105	0/0:33,0:33:87.28:0,87,1116	0/0:31,0:31:78.24:0,78,989	0/0:11,0:11:27.03:0,27,347
chr10	100109327	.	A	AGTGT	128.62	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.466;DP=903;FS=5.343;HRun=0;HaplotypeScore=188.3323;InbreedingCoeff=0.9418;MQ=60.84;MQ0=4;MQRankSum=-0.710;QD=5.85;ReadPosRankSum=-2.196;VQSLOD=1.8678;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,13:21:9.41:212,9,0	0/0:11,0:11:24.05:0,24,373	0/0:41,0:23:47.28:0,47,740	0/0:51,0:38:59.96:0,60,1110	0/0:32,0:32:84.67:0,85,1445	0/0:29,0:29:78.22:0,78,1306	0/0:31,0:31:56.57:0,57,1050	0/0:40,0:39:99:0,108,1682	0/0:39,0:39:90:0,90,1478	0/0:36,0:36:96.30:0,96,1584	0/0:23,0:23:60.19:0,60,1029	0/0:29,0:29:78.25:0,78,1364	0/0:30,0:30:87.25:0,87,1470	0/0:24,0:24:69.21:0,69,1154	0/0:38,0:38:99:0,108,1882	0/0:25,0:25:71.77:0,72,1131	0/0:30,0:30:74.38:0,74,1190	0/0:28,0:28:60.15:0,60,1031	0/0:22,0:20:51.15:0,51,860	0/0:30,0:30:66.18:0,66,1081	0/0:86,0:86:99:0,183,3079	0/0:27,0:27:66.21:0,66,1155	0/0:23,0:23:62.91:0,63,1058	0/0:49,0:49:99:0,125,2135	0/0:35,0:35:79.49:0,79,1371	0/0:35,0:35:97.53:0,98,1588	0/0:24,0:24:60.21:0,60,1076	0/0:12,0:12:36.12:0,36,646
chr10	100109365	.	AGTGT	A	3711.27	PASS	AB=0.811;AC=14;AF=0.250;AN=56;BaseQRankSum=7.633;DP=926;FS=6.245;HRun=0;HaplotypeScore=179.0233;InbreedingCoeff=0.7678;MQ=56.64;MQ0=18;MQRankSum=-1.206;QD=13.50;ReadPosRankSum=0.991;VQSLOD=3.0423;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:33:0:0,0,0	0/0:11,0:12:29.84:0,30,627	0/0:44,0:13:3.01:0,3,39	0/0:43,0:20:8.82:0,9,129	0/0:27,0:27:38.87:0,39,906	0/0:23,0:24:38.87:0,39,882	0/0:16,0:38:52.15:0,52,234	0/0:43,0:46:74.58:0,75,1319	1/1:15,18:32:42.13:673,42,0	0/0:38,0:41:87.61:0,88,1782	0/1:19,0:19:27.34:27,0,414	0/0:30,0:32:37.07:0,37,1178	0/0:22,0:22:39.13:0,39,934	0/0:24,0:24:47.83:0,48,1034	0/0:40,0:43:87.03:0,87,1858	0/0:25,1:26:4.61:0,5,1053	0/0:36,0:36:3.62:0,4,1069	1/1:13,14:27:16.43:438,16,0	1/1:16,5:19:18.05:270,18,0	1/1:10,19:32:7.86:494,8,0	1/1:39,41:80:33.75:1139,34,0	0/0:28,0:28:72.07:0,72,1575	0/0:24,0:24:33.58:0,34,798	0/0:62,1:63:60.85:0,61,2822	0/0:28,0:31:52.58:0,53,1075	0/0:33,0:34:62.63:0,63,1248	1/1:10,20:30:45.38:670,45,0	0/0:12,0:12:24.08:0,24,578
chr10	100112152	.	TAA	T	232.89	PASS	AB=0.615;AC=3;AF=0.054;AN=56;BaseQRankSum=3.441;DP=368;FS=11.673;HRun=9;HaplotypeScore=45.2941;InbreedingCoeff=0.5560;MQ=67.98;MQ0=0;MQRankSum=-5.266;QD=13.70;ReadPosRankSum=-0.441;VQSLOD=-0.0111;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,7:9:21.06:245,21,0	0/0:4,0:4:6.02:0,6,98	0/0:13,0:12:30.10:0,30,485	0/0:18,0:16:36.12:0,36,578	0/0:11,0:11:33.11:0,33,542	0/0:15,0:15:39.13:0,39,640	0/1:3,5:8:37.19:93,0,37	0/0:32,0:33:71.73:0,72,1140	0/0:9,0:9:24.08:0,24,393	0/0:13,0:13:33.11:0,33,541	0/0:9,0:9:21.07:0,21,342	0/0:10,0:10:24.04:0,24,364	0/0:7,0:7:18.03:0,18,264	0/0:14,0:15:41.63:0,42,649	0/0:6,0:6:12.04:0,12,197	0/0:12,0:12:30.09:0,30,468	0/0:26,0:26:63.22:0,63,1033	0/0:17,0:17:51.17:0,51,837	0/0:23,0:23:60.20:0,60,985	0/0:14,0:14:36.12:0,36,591	0/0:14,0:14:39.13:0,39,640	0/0:11,0:11:27.09:0,27,435	0/0:12,0:12:33.11:0,33,541	0/0:20,0:20:57.17:0,57,934	0/0:12,0:12:27.09:0,27,443	0/0:11,0:11:27.02:0,27,411	0/0:12,0:12:30.10:0,30,483	0/0:4,0:4:9.03:0,9,148
chr10	100112900	.	T	TG	1344.52	PASS	AC=34;AF=1.000;AN=34;DP=82;FS=0.000;HRun=0;HaplotypeScore=13.8590;InbreedingCoeff=-0.1323;MQ=20.92;MQ0=26;QD=24.01;VQSLOD=3.9330;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:1,4:4:9.03:143,9,0	1/1:1,1:2:2.99:47,3,0	./.	1/1:6,1:2:5.99:69,6,0	1/1:0,3:3:6.02:95,6,0	1/1:2,2:3:6:96,6,0	./.	1/1:0,2:2:6.02:95,6,0	1/1:1,1:1:3.01:48,3,0	./.	1/1:2,1:1:3.01:48,3,0	1/1:0,1:1:3.01:45,3,0	1/1:1,2:2:6.02:94,6,0	1/1:2,3:5:6.02:95,6,0	1/1:3,2:3:6.02:95,6,0	1/1:2,2:2:6.02:95,6,0	1/1:1,1:1:3.01:48,3,0	./.	./.	./.	1/1:0,1:1:3.01:48,3,0	1/1:2,3:4:12:163,12,0	1/1:0,2:2:6.02:95,6,0	./.
chr10	100112962	.	AT	A	1272.05	PASS	AC=36;AF=1.000;AN=36;DP=161;FS=0.000;HRun=2;HaplotypeScore=31.9094;InbreedingCoeff=-0.0606;MQ=20.39;MQ0=72;QD=9.56;VQSLOD=1.1525;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,1:1:3:28,3,0	./.	./.	1/1:4,1:4:11.75:71,12,0	1/1:4,0:3:8.76:51,9,0	./.	1/1:17,0:10:28.52:184,29,0	1/1:5,0:3:5.78:32,6,0	1/1:4,1:3:8.92:63,9,0	1/1:0,2:2:2.99:23,3,0	1/1:4,0:3:8.84:55,9,0	1/1:1,0:1:2.96:19,3,0	./.	./.	./.	1/1:8,1:5:14.60:88,15,0	1/1:7,1:6:11.92:88,12,0	1/1:17,0:14:35.32:243,35,0	1/1:8,0:2:2.94:18,3,0	./.	./.	1/1:1,1:1:3:27,3,0	./.	1/1:2,0:2:3.83:20,4,0	1/1:14,2:9:25.30:167,25,0	1/1:7,0:5:10.71:51,11,0	1/1:16,4:7:15.78:121,16,0
chr10	100113004	.	GAAGT	G	485.71	PASS	AB=0.963;AC=20;AF=0.400;AN=50;BaseQRankSum=4.410;DP=311;FS=14.136;HRun=0;HaplotypeScore=64.3275;InbreedingCoeff=-0.4018;MQ=53.39;MQ0=54;MQRankSum=-7.402;QD=2.12;ReadPosRankSum=6.591;VQSLOD=-0.5691;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/1:5,0:5:35.87:36,0,110	0/0:56,0:14:6.06:0,6,95	0/1:64,1:11:4.97:5,0,52	0/1:11,0:9:50.13:50,0,181	0/1:4,0:3:2.80:3,0,4	./.	0/1:20,1:14:83.27:83,0,477	0/1:7,0:5:39.95:40,0,46	0/1:11,0:10:25.28:25,0,343	0/1:8,0:8:10.78:11,0,109	0/1:7,0:5:10.12:10,0,66	0/0:2,0:2:3.01:0,3,48	0/0:3,0:3:6.02:0,6,119	1/1:4,2:4:2.97:20,3,0	1/1:2,0:2:2.60:10,3,0	0/1:13,0:8:52.87:53,0,131	0/1:5,0:4:12.32:12,0,156	0/1:17,1:12:40.88:41,0,243	0/0:2,0:2:0.86:0,1,67	0/0:3,0:2:6.01:0,6,97	./.	0/0:6,0:6:12.51:0,13,239	0/0:2,1:2:3.01:0,3,33	0/1:6,0:3:0.28:0,0,3	0/1:13,2:11:99:117,0,206	0/1:7,0:5:13.58:14,0,66	0/1:13,1:12:89.47:89,0,244
chr10	100113006	.	AGTGG	A	412.97	PASS	AB=0.965;AC=19;AF=0.380;AN=50;BaseQRankSum=5.208;DP=303;FS=29.727;HRun=0;HaplotypeScore=64.6323;InbreedingCoeff=-0.5066;MQ=56.27;MQ0=43;MQRankSum=-5.860;QD=1.51;ReadPosRankSum=5.689;VQSLOD=-0.0459;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:5,0:5:24:24,0,209	0/1:63,0:15:9.58:10,0,292	0/1:64,0:11:16.42:16,0,109	0/1:10,1:9:60.37:60,0,266	0/0:2,0:2:2.04:0,2,6	./.	0/1:20,0:15:72.72:73,0,757	0/1:6,1:6:49.98:50,0,76	0/1:13,0:11:2.82:3,0,516	0/1:8,0:8:31.58:32,0,164	0/1:7,0:5:5.47:5,0,90	0/0:2,0:2:3.01:0,3,77	0/0:3,0:3:6.02:0,6,172	0/0:6,0:4:2.37:0,2,8	1/1:2,0:2:2.74:12,3,0	0/1:12,1:8:38.29:38,0,266	0/1:5,0:4:22.08:22,0,241	0/1:13,3:11:48.06:48,0,339	0/1:4,0:3:7.25:7,0,162	0/0:3,0:2:6.02:0,6,146	./.	0/0:6,0:6:5.13:0,5,336	0/0:3,0:2:3.01:0,3,70	0/1:6,0:4:1.40:1,0,83	0/1:11,0:11:97.81:98,0,263	0/1:4,0:3:33.22:33,0,81	0/1:13,0:11:12.11:12,0,341
chr10	100113027	.	A	AAAC	697.84	PASS	AB=0.917;AC=12;AF=0.222;AN=54;BaseQRankSum=-3.037;DP=287;FS=10.482;HRun=0;HaplotypeScore=70.4219;InbreedingCoeff=0.6646;MQ=72.94;MQ0=5;MQRankSum=1.916;QD=8.11;ReadPosRankSum=-0.937;VQSLOD=1.2612;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:22.80:0,23,125	0/0:4,0:4:11.87:0,12,98	0/0:56,0:16:19.24:0,19,179	0/1:45,0:15:1.36:1,0,22	0/0:12,0:12:29.55:0,30,220	0/0:5,0:5:14.73:0,15,141	0/0:2,0:2:5.81:0,6,33	0/0:24,0:24:65.65:0,66,572	0/1:4,0:5:8.17:59,0,8	0/0:11,0:12:26.90:0,27,262	0/0:9,0:8:22.92:0,23,162	0/0:4,0:4:11.75:0,12,93	0/0:4,0:4:12.03:0,12,150	0/0:2,0:2:6:0,6,51	0/0:5,0:5:8.95:0,9,82	0/0:2,0:2:6.01:0,6,57	0/0:13,0:12:29.87:0,30,278	1/1:6,2:8:20.02:231,20,0	1/1:9,4:12:12.24:203,12,0	1/1:2,2:5:5.07:156,5,0	1/1:0,1:3:6.01:84,6,0	./.	0/0:8,0:8:14.83:0,15,136	0/0:4,0:4:8.94:0,9,81	0/0:4,0:4:8.98:0,9,88	0/0:11,0:11:29.80:0,30,242	1/1:6,0:6:14.55:123,15,0	0/0:12,0:12:29.50:0,29,260
chr10	100113031	.	AAC	A	324.98	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=6.954;DP=271;FS=25.933;HRun=0;HaplotypeScore=63.1862;InbreedingCoeff=-0.0390;MQ=73.67;MQ0=3;MQRankSum=-3.991;QD=2.56;ReadPosRankSum=-0.590;VQSLOD=-0.2665;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:23.91:184,24,0	0/1:4,0:4:23.65:24,0,34	0/1:48,0:14:9.08:9,0,160	0/0:36,0:15:7.32:0,7,61	0/1:10,0:10:34.93:35,0,172	0/0:5,0:5:3.02:0,3,137	1/1:0,2:2:5.98:47,6,0	0/0:27,0:27:49.62:0,50,883	0/1:4,0:4:5.58:6,0,55	0/1:10,0:10:7.08:7,0,195	0/1:9,0:8:46.50:47,0,49	0/1:4,0:4:28.38:28,0,37	0/0:4,0:4:12.04:0,12,189	0/1:2,0:2:25.19:25,0,41	0/0:5,0:5:6.91:0,7,103	0/1:2,0:2:1.51:2,0,13	0/0:13,0:12:17.61:0,18,419	0/0:9,0:9:15.41:0,15,254	0/0:14,0:12:27.04:0,27,305	0/0:5,0:5:14.26:0,14,170	0/0:5,0:5:12.02:0,12,136	./.	0/0:7,0:7:13.16:0,13,136	0/0:4,0:4:3.90:0,4,86	0/0:4,0:4:8.62:0,9,99	0/1:11,0:11:60.77:61,0,156	0/0:6,0:6:12.51:0,13,162	0/1:12,0:12:0.43:0,0,115
chr10	100113036	.	A	AGTT	598.34	PASS	AB=1.000;AC=5;AF=0.093;AN=54;BaseQRankSum=2.371;DP=264;FS=7.056;HRun=0;HaplotypeScore=69.1077;InbreedingCoeff=0.6358;MQ=73.81;MQ0=3;MQRankSum=-2.498;QD=10.14;ReadPosRankSum=2.653;VQSLOD=1.6521;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,9:12:30.10:515,30,0	0/0:4,0:4:12.04:0,12,210	0/1:41,0:14:4.68:5,0,286	0/0:25,0:11:12.89:0,13,87	0/0:10,0:10:30.10:0,30,504	0/0:7,0:7:21.07:0,21,358	1/1:4,2:6:12.02:197,12,0	0/0:29,0:29:84.23:0,84,1434	0/0:3,0:3:8.76:0,9,80	0/0:10,0:10:24.08:0,24,435	0/0:9,0:8:24.08:0,24,405	0/0:4,0:4:12.04:0,12,212	0/0:4,0:4:12.04:0,12,224	0/0:2,0:2:6.02:0,6,97	0/0:4,0:4:9.03:0,9,165	0/0:3,0:3:9.03:0,9,140	0/0:13,0:12:33.09:0,33,579	0/0:10,0:10:27.04:0,27,369	0/0:13,0:11:32.60:0,33,420	0/0:5,0:5:15.05:0,15,229	0/0:6,0:6:15.05:0,15,250	./.	0/0:6,0:6:15.05:0,15,276	0/0:7,0:7:14.96:0,15,196	0/0:4,0:4:9.03:0,9,165	0/0:11,0:11:27.06:0,27,434	0/0:6,0:6:13.29:0,13,218	0/0:10,0:10:30.10:0,30,545
chr10	100113450	.	G	GGA	745.05	PASS	AB=0.983;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.554;DP=395;FS=2.376;HRun=0;HaplotypeScore=60.3311;InbreedingCoeff=0.4362;MQ=85.95;MQ0=0;MQRankSum=-1.081;QD=10.35;ReadPosRankSum=-3.440;VQSLOD=2.6661;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:33.11:590,33,0	0/0:5,0:5:15.02:0,15,173	0/0:13,0:14:19.96:0,20,306	0/0:22,0:22:45.98:0,46,500	0/0:9,0:9:27:0,27,328	0/0:17,0:17:51.11:0,51,654	1/1:1,0:11:15:166,15,0	0/0:26,0:26:71.84:0,72,786	0/0:27,0:27:5:0,5,117	0/0:10,0:10:30.04:0,30,351	0/0:9,0:9:20.92:0,21,227	0/0:15,0:15:42.13:0,42,568	0/0:10,0:10:27.05:0,27,323	0/0:17,0:17:48.06:0,48,601	0/0:21,0:21:60.17:0,60,801	0/0:10,0:10:30.08:0,30,400	0/0:16,0:16:44.93:0,45,544	0/1:12,0:12:7.19:7,0,48	0/1:18,0:19:29.35:64,0,29	0/1:13,0:13:41.37:55,0,41	0/0:23,0:23:2.66:0,3,118	0/0:5,0:5:12.02:0,12,137	0/0:11,0:11:30.03:0,30,346	0/0:12,0:12:35.08:0,35,398	0/0:12,0:12:33.02:0,33,354	0/0:12,0:12:36.01:0,36,423	0/0:16,0:16:9.62:0,10,92	0/0:4,0:4:12.02:0,12,148
chr10	100113602	.	T	TCA	365.55	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.820;DP=403;FS=0.000;HRun=0;HaplotypeScore=61.7617;InbreedingCoeff=0.8989;MQ=70.30;MQ0=1;MQRankSum=-3.380;QD=12.61;ReadPosRankSum=-2.679;VQSLOD=2.6616;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,1:18:14.17:167,14,0	0/0:7,0:7:21.07:0,21,339	0/0:15,0:11:4.66:0,5,98	0/0:20,0:14:16.42:0,16,276	0/0:17,0:17:51.12:0,51,768	0/0:16,0:16:48.15:0,48,751	1/1:8,3:11:26.97:316,27,0	0/0:32,0:32:84.22:0,84,1255	0/0:13,0:13:39.06:0,39,512	0/0:11,0:11:33.09:0,33,473	0/0:19,0:19:57.16:0,57,856	0/0:6,0:6:18.03:0,18,244	0/0:8,0:8:24.06:0,24,344	0/0:10,0:10:30.08:0,30,436	0/0:11,0:11:30.08:0,30,444	0/0:7,0:7:18.06:0,18,291	0/0:31,0:31:90.31:0,90,1456	0/0:19,0:19:57.09:0,57,792	0/0:19,0:18:54.16:0,54,804	0/0:13,0:13:39.07:0,39,514	0/0:14,0:14:42.12:0,42,637	0/0:5,0:5:15.04:0,15,221	0/0:8,0:8:24.04:0,24,339	0/0:7,0:7:21.05:0,21,311	0/0:16,0:16:48.15:0,48,738	0/0:17,0:17:51.14:0,51,722	0/0:17,0:17:51.11:0,51,730	0/0:15,0:15:42.13:0,42,646
chr10	100113628	.	ATAT	A	241.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.948;DP=403;FS=5.289;HRun=0;HaplotypeScore=63.7844;InbreedingCoeff=0.7364;MQ=73.18;MQ0=1;MQRankSum=-4.951;QD=14.21;ReadPosRankSum=0.167;VQSLOD=2.4657;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,11:17:6.06:322,6,0	0/0:4,0:4:12.04:0,12,272	0/0:14,0:10:17.31:0,17,210	0/0:27,0:18:30.19:0,30,470	0/0:15,0:15:37.01:0,37,810	0/0:18,0:18:54.18:0,54,1162	0/0:3,0:3:5.64:0,6,28	0/0:44,0:44:99:0,129,2842	0/0:10,0:10:27.09:0,27,565	0/0:8,0:8:24.06:0,24,476	0/0:21,0:21:57.20:0,57,1252	0/0:7,0:7:21.07:0,21,453	0/0:10,0:10:30.10:0,30,653	0/0:9,0:9:27.09:0,27,608	0/0:10,0:10:27.08:0,27,569	0/0:8,0:8:21.07:0,21,418	0/0:35,0:35:99:0,105,2258	0/0:20,0:20:60.16:0,60,1311	0/0:17,0:17:48.16:0,48,1081	0/0:13,0:13:36.12:0,36,793	0/0:12,0:12:36.12:0,36,787	0/0:6,0:6:18.06:0,18,403	0/0:8,0:8:24.04:0,24,487	0/0:7,0:7:21.07:0,21,427	0/0:16,0:16:45.15:0,45,1016	0/0:12,0:12:36.12:0,36,801	0/0:13,0:13:36.11:0,36,775	0/0:19,0:19:57.20:0,57,1257
chr10	100113629	.	T	TG	298.63	PASS	AB=0.895;AC=4;AF=0.071;AN=56;BaseQRankSum=5.590;DP=405;FS=0.000;HRun=0;HaplotypeScore=48.2713;InbreedingCoeff=0.4112;MQ=73.21;MQ0=1;MQRankSum=-5.441;QD=9.33;ReadPosRankSum=0.464;VQSLOD=3.3702;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,4:15:10.08:324,0,10	0/0:5,0:5:15.05:0,15,209	0/1:14,0:10:13.38:13,0,157	0/0:27,0:18:31.13:0,31,331	0/0:14,0:15:45.06:0,45,602	0/0:18,0:18:54.16:0,54,737	1/1:1,2:3:6.02:65,6,0	0/0:45,0:45:99:0,132,1830	0/0:10,0:10:30.10:0,30,416	0/0:8,0:8:24.08:0,24,335	0/0:20,0:20:60.19:0,60,822	0/0:7,0:7:21.07:0,21,292	0/0:10,0:10:30.10:0,30,418	0/0:9,0:9:27.09:0,27,378	0/0:9,0:9:27.09:0,27,377	0/0:8,0:8:21.06:0,21,277	0/0:36,0:36:99:0,105,1411	0/0:21,0:21:60.20:0,60,837	0/0:17,0:17:51.17:0,51,709	0/0:14,0:14:39.11:0,39,527	0/0:13,0:13:36.12:0,36,503	0/0:6,0:6:18.06:0,18,252	0/0:9,0:9:24.08:0,24,329	0/0:7,0:7:21.07:0,21,291	0/0:16,0:16:48.16:0,48,671	0/0:12,0:12:36.12:0,36,504	0/0:12,0:12:36.12:0,36,503	0/0:19,0:19:57.19:0,57,795
chr10	100113962	.	TTTTC	T	1990.90	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=6.083;DP=523;FS=6.979;HRun=0;HaplotypeScore=90.1419;InbreedingCoeff=0.8434;MQ=66.55;MQ0=39;MQRankSum=-2.151;QD=14.02;ReadPosRankSum=-4.376;VQSLOD=1.4252;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:2:3.01:0,3,63	0/0:7,0:7:20.95:0,21,340	0/0:28,0:11:12.75:0,13,92	0/1:22,0:12:13.03:13,0,116	0/0:26,0:26:69.94:0,70,1306	0/0:21,0:19:51.12:0,51,1025	./.	0/0:19,0:19:39.31:0,39,741	1/1:5,11:14:8.62:187,9,0	0/0:21,0:20:40.17:0,40,631	0/0:26,0:24:57.49:0,57,1040	0/0:20,0:17:34.20:0,34,645	0/0:13,0:12:30.05:0,30,467	0/0:19,0:17:45.10:0,45,814	0/0:21,0:19:52.95:0,53,1001	0/0:13,0:13:36:0,36,632	0/0:35,0:34:90.15:0,90,1775	1/1:19,3:16:36.97:372,37,0	1/1:3,20:21:50.98:446,51,0	1/1:21,2:20:53.30:629,53,0	1/1:10,1:11:22.62:192,23,0	0/0:12,0:12:10.74:0,11,389	0/0:13,0:13:18:0,18,511	0/0:26,0:23:59.68:0,60,1130	0/0:14,0:13:38.47:0,38,675	0/0:29,0:27:81.22:0,81,1537	1/1:8,17:23:23.99:335,24,0	0/0:13,0:13:39.13:0,39,737
chr10	100113970	.	TTTC	T	282.78	PASS	AB=0.965;AC=8;AF=0.148;AN=54;BaseQRankSum=7.837;DP=515;FS=43.297;HRun=0;HaplotypeScore=81.6993;InbreedingCoeff=0.0430;MQ=57.08;MQ0=41;MQRankSum=-1.011;QD=1.96;ReadPosRankSum=-2.546;VQSLOD=-0.3818;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:2:2.97:0,3,20	0/0:9,0:9:27.04:0,27,438	1/1:18,0:5:3.46:23,3,0	0/0:14,0:6:2.89:0,3,96	0/0:25,0:25:68.88:0,69,1150	0/0:22,0:20:54.18:0,54,1013	./.	0/0:17,0:17:51.10:0,51,793	0/1:16,2:15:30.43:59,0,30	0/0:16,0:15:34.16:0,34,662	0/0:27,0:25:65.88:0,66,1179	0/0:22,0:19:37.12:0,37,766	0/0:16,0:14:21.81:0,22,402	0/0:18,0:16:42.10:0,42,667	0/0:22,0:19:47.50:0,48,772	0/0:14,0:14:39.11:0,39,665	0/0:37,0:36:90.13:0,90,1544	0/1:21,0:15:51.85:52,0,93	0/1:24,0:21:71.20:71,0,146	0/1:24,1:22:99:141,0,100	0/1:11,0:10:24.98:25,0,50	0/0:10,0:10:24.05:0,24,400	0/0:14,0:14:18.08:0,18,591	0/0:28,0:25:56.76:0,57,1079	0/0:14,0:13:38.99:0,39,632	0/0:29,0:27:78.24:0,78,1413	0/1:25,2:25:8.10:42,0,8	0/0:12,0:12:32.98:0,33,410
chr10	100115205	.	C	CT	517.52	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.380;DP=561;FS=6.323;HRun=6;HaplotypeScore=59.1457;InbreedingCoeff=0.9392;MQ=83.89;MQ0=0;MQRankSum=-2.729;QD=28.75;ReadPosRankSum=-0.872;VQSLOD=3.8659;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:18:51.99:612,52,0	0/0:10,0:10:30.07:0,30,306	0/0:15,0:15:33.86:0,34,363	0/0:20,0:20:45.61:0,46,443	0/0:39,0:39:99:0,114,1156	0/0:24,0:24:72.15:0,72,728	0/0:15,0:15:42.07:0,42,420	0/0:44,0:44:99:0,114,1136	0/0:20,0:20:60.14:0,60,612	0/0:19,0:19:48.10:0,48,486	0/0:28,0:28:75.15:0,75,758	0/0:15,0:15:39.09:0,39,398	0/0:23,0:23:69.16:0,69,704	0/0:16,0:16:48.10:0,48,483	0/0:18,0:18:48.11:0,48,490	0/0:17,0:17:48.11:0,48,490	0/0:19,0:19:54.10:0,54,543	0/0:11,0:11:21.01:0,21,203	0/0:14,0:14:30.05:0,30,299	0/0:36,0:36:99:0,102,1040	0/0:10,0:10:27.06:0,27,275	0/0:18,0:18:51.10:0,51,512	0/0:21,0:21:60.11:0,60,598	0/0:13,0:13:33.06:0,33,329	0/0:23,0:23:60.13:0,60,612	0/0:28,0:28:66.11:0,66,661	0/0:24,0:24:63.14:0,63,643	0/0:3,0:3:9.02:0,9,92
chr10	100115899	.	TAC	T	3629.05	PASS	AB=0.929;AC=22;AF=0.393;AN=56;BaseQRankSum=10.722;DP=735;FS=4.890;HRun=0;HaplotypeScore=83.1823;InbreedingCoeff=0.5640;MQ=64.14;MQ0=25;MQRankSum=-0.802;QD=10.80;ReadPosRankSum=1.209;VQSLOD=3.2100;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,17:31:32.76:343,33,0	0/0:15,0:15:42.10:0,42,625	0/0:80,0:17:12.04:0,12,184	0/0:51,0:18:18.04:0,18,218	0/1:21,2:23:24.87:25,0,543	0/0:24,1:25:63.20:0,63,964	1/1:3,16:19:39.12:455,39,0	0/0:26,0:26:27.56:0,28,407	1/1:7,15:24:38.78:413,39,0	0/0:26,0:26:38.88:0,39,604	0/1:19,2:21:33.89:34,0,411	0/0:20,0:20:51.17:0,51,788	0/1:17,2:19:15.62:16,0,697	0/0:23,0:23:63.21:0,63,981	0/0:29,0:29:48.15:0,48,732	0/1:28,2:30:3.78:4,0,846	0/1:20,0:20:1.94:2,0,437	1/1:3,16:19:40.36:487,40,0	1/1:5,7:13:23.90:259,24,0	1/1:9,13:25:38.61:392,39,0	1/1:12,20:33:50.85:573,51,0	0/0:16,0:17:33.11:0,33,491	0/0:17,1:18:4.13:0,4,503	0/1:23,3:26:38.79:39,0,805	0/0:32,0:32:26.41:0,26,839	0/0:23,1:24:13.14:0,13,647	1/1:11,20:33:53.82:588,54,0	0/0:12,0:12:9.03:0,9,138
chr10	100116892	.	AATTATTATTATTATT	A	548.65	PASS	AB=0.886;AC=6;AF=0.188;AN=32;BaseQRankSum=3.305;DP=199;FS=10.787;HRun=0;HaplotypeScore=84.2888;InbreedingCoeff=0.3120;MQ=77.17;MQ0=2;MQRankSum=-3.628;QD=11.67;ReadPosRankSum=0.449;VQSLOD=0.6979;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:8:18.06:0,18,805	./.	./.	0/1:19,0:11:0:0,0,0	0/0:4,0:4:3.01:0,3,205	0/0:6,0:6:12.04:0,12,792	0/0:2,0:2:2.99:0,3,24	0/0:35,0:35:39.13:0,39,1359	1/1:1,2:3:3.01:43,3,0	0/0:2,0:3:6.02:0,6,351	./.	0/0:4,0:4:3.01:0,3,160	./.	./.	0/0:2,0:3:3.01:0,3,104	./.	0/0:25,0:25:42.14:0,42,2444	0/1:12,5:17:65.32:240,0,65	./.	./.	./.	./.	0/0:0,0:1:3.01:0,3,76	./.	0/0:3,0:6:3.01:0,3,136	./.	1/1:2,6:8:9.03:363,9,0	0/0:17,0:17:36.09:0,36,1554
chr10	100119183	.	AT	A	397.71	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.559;DP=527;FS=0.920;HRun=8;HaplotypeScore=51.2326;InbreedingCoeff=0.9273;MQ=80.08;MQ0=0;MQRankSum=-1.012;QD=23.39;ReadPosRankSum=0.289;VQSLOD=4.0770;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:63.18:0,63,750	0/0:5,0:5:12.04:0,12,145	0/0:23,0:23:30.62:0,31,591	0/0:11,0:12:15.03:0,15,166	0/0:20,0:20:57.17:0,57,688	0/0:30,0:30:87.26:0,87,1040	0/0:14,0:14:36.10:0,36,423	0/0:32,0:32:75.22:0,75,895	1/1:0,17:17:51.08:493,51,0	0/0:21,0:21:63.18:0,63,742	0/0:19,0:19:54.16:0,54,642	0/0:12,0:12:36.11:0,36,435	0/0:14,0:15:44.99:0,45,509	0/0:16,0:16:45.13:0,45,532	0/0:20,0:20:54.15:0,54,641	0/0:20,0:20:54.17:0,54,652	0/0:17,0:17:48.13:0,48,566	0/0:19,0:19:51.16:0,51,616	0/0:18,0:19:48.01:0,48,557	0/0:26,0:26:69.21:0,69,834	0/0:21,0:21:60.18:0,60,725	0/0:23,0:23:63.19:0,63,761	0/0:23,0:23:63.18:0,63,749	0/0:12,0:12:36.11:0,36,435	0/0:15,0:15:39.11:0,39,462	0/0:29,0:29:66.20:0,66,791	0/0:12,0:13:35.98:0,36,412	0/0:6,0:6:12.04:0,12,145
chr10	100120081	.	A	AT	4253.36	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=0.025;DP=522;FS=1.710;HRun=9;HaplotypeScore=57.5037;InbreedingCoeff=0.9821;MQ=75.11;MQ0=0;MQRankSum=-0.622;QD=23.90;ReadPosRankSum=-0.177;VQSLOD=5.5351;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:29:66.18:730,66,0	0/0:10,0:10:23.95:0,24,200	0/0:13,0:12:14.19:0,14,195	0/0:10,0:11:21.95:0,22,170	0/0:21,0:21:53.96:0,54,464	0/0:21,0:21:56.94:0,57,488	1/1:1,20:21:45.12:498,45,0	0/0:29,0:29:56.96:0,57,495	1/1:6,22:28:25.09:505,25,0	0/0:15,0:15:38.98:0,39,338	0/0:24,0:24:38.68:0,39,496	0/0:16,1:17:12.01:0,12,315	0/0:22,0:22:61.14:0,61,533	0/0:15,0:15:38.98:0,39,336	0/0:10,0:10:26.99:0,27,234	0/0:16,0:16:29.97:0,30,260	0/0:16,0:16:35.74:0,36,333	1/1:2,15:17:10.04:338,10,0	1/1:7,13:21:41.93:437,42,0	1/1:2,20:22:58.35:608,58,0	1/1:2,12:14:42.07:444,42,0	0/0:22,0:22:60.85:0,61,515	0/0:14,0:14:32.20:0,32,267	0/0:23,0:24:65.02:0,65,553	0/0:17,0:17:47.99:0,48,416	0/0:17,0:17:50.99:0,51,442	1/1:3,22:24:63.17:695,63,0	0/0:10,0:10:29.99:0,30,260
chr10	100121038	.	CA	C	809.85	PASS	AC=14;AF=0.292;AN=48;BaseQRankSum=2.438;DP=159;FS=8.125;HRun=3;HaplotypeScore=20.1164;InbreedingCoeff=0.7461;MQ=81.71;MQ0=2;MQRankSum=-0.920;QD=19.75;ReadPosRankSum=-1.964;VQSLOD=1.8009;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:6:15.05:184,15,0	0/0:1,0:1:3.01:0,3,39	0/0:10,0:10:20.55:0,21,238	0/0:10,0:4:9.03:0,9,116	0/0:4,0:4:12.04:0,12,157	0/0:2,0:2:6.02:0,6,79	1/1:1,1:2:3.01:37,3,0	0/0:15,0:15:42.04:0,42,499	1/1:2,2:4:6.02:74,6,0	0/0:8,0:8:21.07:0,21,275	0/0:7,0:7:21.07:0,21,279	0/0:4,0:4:9.03:0,9,117	0/0:4,0:4:3.01:0,3,39	./.	./.	0/0:5,0:5:12.02:0,12,130	0/0:15,0:15:44.47:0,44,535	1/1:8,9:15:19.49:287,19,0	1/1:0,6:6:18.05:209,18,0	./.	1/1:1,0:1:3.01:36,3,0	0/0:5,0:5:12.04:0,12,157	./.	0/0:2,0:2:6.01:0,6,64	0/0:4,0:4:11.40:0,11,126	0/0:6,0:6:14.41:0,14,165	1/1:0,5:5:12.04:147,12,0	0/0:8,0:8:22.76:0,23,223
chr10	100121682	.	GT	G	1452.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.797;DP=666;FS=8.192;HRun=4;HaplotypeScore=70.8590;InbreedingCoeff=0.9976;MQ=86.94;MQ0=0;MQRankSum=-3.360;QD=31.57;ReadPosRankSum=2.659;VQSLOD=4.1602;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,45:46:99:1547,129,0	0/0:11,0:11:33.11:0,33,461	0/0:19,0:19:45.12:0,45,605	0/0:25,0:25:69.19:0,69,922	0/0:29,0:29:87.29:0,87,1203	0/0:33,0:33:93.29:0,93,1271	0/0:26,0:26:78.25:0,78,1074	0/0:29,0:29:84.26:0,84,1131	0/0:19,0:19:57.19:0,57,797	0/0:33,0:33:93.31:0,93,1302	0/0:14,0:14:39.12:0,39,529	0/0:25,0:25:72.23:0,72,990	0/0:23,0:23:66.19:0,66,902	0/0:27,0:27:81.27:0,81,1133	0/0:16,0:16:48.16:0,48,672	0/0:24,0:24:66.22:0,66,924	0/0:23,0:23:69.23:0,69,965	0/0:13,0:13:39.13:0,39,546	0/0:28,0:28:72.22:0,72,989	0/0:29,0:29:81.26:0,81,1119	0/0:29,0:29:84.28:0,84,1176	0/0:32,0:32:96.31:0,96,1326	0/0:18,0:18:54.18:0,54,756	0/0:25,0:25:75.24:0,75,1031	0/0:23,0:23:69.20:0,69,920	0/0:20,0:20:57.19:0,57,798	0/0:19,0:19:51.17:0,51,714	0/0:8,0:8:24.08:0,24,336
chr10	100122402	.	A	AT	3131.57	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.736;DP=583;FS=20.857;HRun=9;HaplotypeScore=72.9518;InbreedingCoeff=0.9986;MQ=85.93;MQ0=0;MQRankSum=-1.203;QD=24.09;ReadPosRankSum=-0.276;VQSLOD=2.2726;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:89.95:0,90,777	0/0:12,0:12:29.97:0,30,257	0/0:23,1:25:25.28:0,25,373	0/0:23,0:23:32.55:0,33,265	0/0:16,0:16:38.95:0,39,334	0/0:30,1:31:53.78:0,54,692	0/0:12,0:14:31.05:0,31,242	0/0:31,0:31:80.96:0,81,700	1/1:4,21:25:54.15:597,54,0	0/0:20,0:20:50.98:0,51,443	0/0:17,0:17:35.96:0,36,307	0/0:12,0:12:29.97:0,30,256	0/0:11,0:11:26.98:0,27,234	0/0:11,0:11:26.98:0,27,232	0/0:15,0:15:44.97:0,45,387	0/0:12,0:12:26.98:0,27,232	0/0:34,0:34:53.73:0,54,691	1/1:3,15:18:39.11:430,39,0	1/1:5,20:25:60.15:649,60,0	1/1:3,17:21:59.97:627,60,0	1/1:1,17:18:48.09:518,48,0	0/0:17,0:17:38.98:0,39,338	0/0:23,0:23:65.77:0,66,556	0/0:33,0:33:92.94:0,93,800	0/0:21,0:21:56.98:0,57,495	0/0:19,0:19:47.96:0,48,417	1/1:3,20:23:45.12:498,45,0	0/0:22,0:22:64.80:0,65,552
chr10	100123490	.	CTTTT	C	1473.91	PASS	AB=0.764;AC=12;AF=0.214;AN=56;BaseQRankSum=5.321;DP=502;FS=0.000;HRun=17;HaplotypeScore=91.4184;InbreedingCoeff=0.7337;MQ=70.69;MQ0=2;MQRankSum=0.521;QD=9.70;ReadPosRankSum=6.831;VQSLOD=-0.5802;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,3:35:35.28:74,0,35	0/0:6,0:6:15.05:0,15,307	0/0:27,0:22:29.88:0,30,330	0/1:14,0:12:17.46:17,0,44	0/0:14,0:17:45.15:0,45,821	0/0:15,0:20:51.16:0,51,866	0/0:3,0:13:20.60:0,21,145	0/0:21,0:24:45.05:0,45,813	1/1:6,11:18:28.24:345,28,0	0/0:19,0:21:48.11:0,48,800	0/0:16,0:19:48.14:0,48,803	0/0:9,0:12:21.07:0,21,401	0/0:14,0:14:27.09:0,27,581	0/0:7,0:9:24.08:0,24,439	0/0:13,0:17:36.12:0,36,728	0/0:12,0:13:5.42:0,5,498	0/0:18,0:20:45.61:0,46,883	1/1:3,15:19:31.15:368,31,0	1/1:9,10:22:33.41:344,33,0	1/1:5,7:13:17.74:201,18,0	0/0:5,3:8:1.82:0,2,5	0/0:11,0:12:18.06:0,18,319	0/0:17,0:20:39.13:0,39,790	0/0:17,0:21:48.63:0,49,953	0/0:20,0:22:48.13:0,48,927	0/0:20,0:24:55.19:0,55,919	1/1:12,15:27:23.50:304,23,0	0/0:7,0:9:18.06:0,18,305
chr10	100123820	.	CCA	C	990.05	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=4.163;DP=384;FS=32.894;HRun=0;HaplotypeScore=56.4666;InbreedingCoeff=0.9054;MQ=74.68;MQ0=0;MQRankSum=-3.631;QD=12.69;ReadPosRankSum=-5.860;VQSLOD=0.9330;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:24.79:208,25,0	0/0:5,0:5:15.03:0,15,227	0/0:24,0:21:38.69:0,39,614	0/0:11,0:10:6.78:0,7,198	0/0:21,0:21:60.16:0,60,947	0/0:19,0:19:57.16:0,57,906	1/1:10,4:14:38.96:377,39,0	0/0:22,0:22:60.15:0,60,810	1/1:7,0:7:2.04:42,2,0	0/0:18,0:18:51.13:0,51,833	0/0:14,0:14:39.13:0,39,660	0/0:11,0:11:30.09:0,30,499	0/0:9,0:9:27.08:0,27,429	0/0:6,0:6:18.06:0,18,304	0/0:22,0:22:63.14:0,63,1004	0/0:5,0:5:15.05:0,15,248	0/0:34,0:34:99:0,102,1706	1/1:6,2:8:11.71:142,12,0	1/1:8,2:10:17.99:171,18,0	1/1:9,0:9:14.32:108,14,0	1/1:7,0:7:8.97:72,9,0	0/0:12,0:12:27.07:0,27,446	0/0:12,0:12:36.11:0,36,569	0/0:10,0:10:30.06:0,30,476	0/0:20,0:20:60.20:0,60,1004	0/0:24,0:24:69.15:0,69,1106	1/1:10,0:10:6.57:63,7,0	0/0:7,0:7:21.07:0,21,355
chr10	100123821	.	CA	C	1127.48	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=3.688;DP=383;FS=28.413;HRun=1;HaplotypeScore=49.3275;InbreedingCoeff=0.9560;MQ=73.64;MQ0=0;MQRankSum=-2.337;QD=14.45;ReadPosRankSum=-5.716;VQSLOD=0.1532;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:32.95:268,33,0	0/0:5,0:5:15.03:0,15,183	0/0:23,1:21:38.31:0,38,502	0/0:10,0:9:17.49:0,17,201	0/0:21,0:21:60.13:0,60,744	0/0:19,0:19:57.16:0,57,723	1/1:12,2:14:38.62:278,39,0	0/0:21,0:21:59.87:0,60,647	1/1:3,4:7:14.92:162,15,0	0/0:20,0:20:54.12:0,54,683	0/0:15,0:15:39.12:0,39,517	0/0:10,0:10:30.09:0,30,379	0/0:9,0:9:27.08:0,27,339	0/0:6,0:6:18.06:0,18,236	0/0:22,0:22:63.12:0,63,798	0/0:5,0:5:15.05:0,15,190	0/0:34,0:34:99:0,102,1319	1/1:6,1:7:11.97:112,12,0	1/1:10,0:10:21.40:168,21,0	1/1:3,6:9:14.99:167,15,0	1/1:7,1:8:8.97:72,9,0	0/0:12,0:12:30.05:0,30,364	0/0:12,0:12:36.09:0,36,442	0/0:10,0:10:30.06:0,30,375	0/0:20,0:20:60.18:0,60,778	0/0:23,0:23:69.16:0,69,878	1/1:1,9:10:7.57:101,8,0	0/0:7,0:7:21.07:0,21,278
chr10	100124689	.	G	GA	1103.60	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.291;DP=639;FS=4.987;HRun=9;HaplotypeScore=63.0361;InbreedingCoeff=0.9482;MQ=79.54;MQ0=0;MQRankSum=-2.722;QD=25.08;ReadPosRankSum=0.021;VQSLOD=4.3739;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,40:44:88.29:1198,88,0	0/0:10,0:10:29.99:0,30,260	0/0:23,0:23:40.99:0,41,342	0/0:13,0:14:9.40:0,9,144	0/0:19,0:19:56.99:0,57,495	0/0:23,0:24:62.01:0,62,523	0/0:33,0:33:86.94:0,87,748	0/0:17,0:16:41.96:0,42,358	0/0:27,0:27:68.96:0,69,595	0/0:25,0:25:68.93:0,69,591	0/0:16,0:16:41.98:0,42,365	0/0:22,0:22:56.99:0,57,495	0/0:18,0:18:44.96:0,45,387	0/0:31,0:32:85.93:0,86,726	0/0:25,0:25:68.97:0,69,595	0/0:17,0:17:41.97:0,42,360	0/0:36,0:36:95.98:0,96,833	0/0:24,0:24:59.88:0,60,504	0/0:30,0:30:77.97:0,78,677	0/0:18,0:18:44.97:0,45,391	0/0:18,0:18:41.97:0,42,361	0/0:21,0:21:53.98:0,54,469	0/0:25,0:25:59.90:0,60,503	0/0:21,0:21:40.14:0,40,471	0/0:22,0:22:62.99:0,63,547	0/0:16,0:16:38.99:0,39,339	0/0:25,0:25:65.97:0,66,573	0/0:17,0:17:35.97:0,36,313
chr10	100124878	.	AGG	A	3204.77	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.801;DP=627;FS=0.860;HRun=9;HaplotypeScore=129.0344;InbreedingCoeff=0.9862;MQ=106.10;MQ0=3;MQRankSum=-5.890;QD=21.65;ReadPosRankSum=5.103;VQSLOD=1.9847;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,26:35:54.15:627,54,0	0/0:18,0:18:42.14:0,42,666	0/0:77,0:55:99:0,131,1672	0/0:80,0:62:99:0,157,1863	0/0:15,0:16:33.09:0,33,487	0/0:19,0:21:53.60:0,54,776	0/0:29,0:29:66.18:0,66,981	0/0:19,0:19:36.11:0,36,548	1/1:3,19:22:45.13:519,45,0	0/0:15,0:15:24.08:0,24,378	0/0:6,0:6:9.03:0,9,143	0/0:17,0:17:36.07:0,36,543	0/0:18,0:18:48.14:0,48,758	0/0:20,0:20:42.14:0,42,665	0/0:20,0:20:51.16:0,51,811	0/0:22,0:22:63.20:0,63,982	0/0:14,0:14:35.48:0,35,539	1/1:0,7:7:18.05:207,18,0	1/1:3,15:18:45.12:517,45,0	1/1:3,12:15:30.08:342,30,0	1/1:4,30:34:69.11:773,69,0	0/0:16,0:16:45.12:0,45,676	0/0:20,0:20:57.18:0,57,876	0/0:12,0:12:30.10:0,30,491	0/0:18,0:19:48.14:0,48,732	0/0:9,0:10:21.06:0,21,322	1/1:3,14:17:36.10:419,36,0	0/0:8,0:9:24.08:0,24,385
chr10	100125586	.	TTG	T	712.37	PASS	AB=0.912;AC=19;AF=0.352;AN=54;BaseQRankSum=3.591;DP=605;FS=6.048;HRun=0;HaplotypeScore=76.5213;InbreedingCoeff=0.1223;MQ=60.69;MQ0=13;MQRankSum=-0.894;QD=2.34;ReadPosRankSum=1.819;VQSLOD=1.1579;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:41:11.96:0,12,106	0/0:5,0:5:3.01:0,3,45	./.	0/1:36,0:19:0:0,0,0	0/1:17,0:17:25.55:26,0,166	0/0:23,0:23:27.04:0,27,337	0/0:20,0:36:9.48:0,9,98	0/0:18,1:18:6.61:0,7,36	1/1:13,5:18:1.16:126,1,0	0/0:30,0:29:0.66:0,1,341	0/1:13,1:15:8.95:9,0,196	0/0:14,0:14:20.94:0,21,244	0/0:9,0:9:5.36:0,5,32	0/1:16,2:18:6.44:6,0,285	0/0:16,0:17:10.37:0,10,229	0/0:15,0:15:17.66:0,18,267	0/1:38,1:40:20.51:21,0,641	1/1:11,12:23:24.92:264,25,0	1/1:14,0:14:2.80:13,3,0	0/1:3,6:10:15.08:38,0,15	1/1:19,0:20:13.68:113,14,0	0/0:21,0:20:6.94:0,7,230	0/0:18,0:18:15.01:0,15,202	0/1:27,2:29:39.09:39,0,350	0/0:20,0:20:2.68:0,3,174	0/1:26,0:26:72.40:72,0,171	1/1:12,1:14:7.22:108,7,0	0/1:20,2:20:35.82:36,0,269
chr10	100126546	.	TTAAG	T	7637.05	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.602;DP=554;FS=4.324;HRun=0;HaplotypeScore=91.2240;InbreedingCoeff=0.9985;MQ=85.06;MQ0=0;MQRankSum=-5.741;QD=43.39;ReadPosRankSum=2.289;VQSLOD=5.0990;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,35:41:90.31:1661,90,0	0/0:8,0:8:21.07:0,21,560	0/0:22,0:22:54.14:0,54,1457	0/0:16,0:16:39.13:0,39,856	0/0:17,0:17:45.13:0,45,1094	0/0:27,0:27:75.26:0,75,1930	1/1:1,15:16:35.82:670,36,0	0/0:36,0:36:96.32:0,96,2328	1/1:2,14:16:33.11:598,33,0	0/0:26,0:26:75.26:0,75,1979	0/0:23,0:23:63.13:0,63,1475	0/0:19,0:19:57.20:0,57,1483	0/0:17,0:17:51.17:0,51,1299	0/0:16,0:16:45.15:0,45,1136	0/0:15,0:15:42.14:0,42,1083	0/0:11,0:11:33.11:0,33,880	0/0:19,0:19:48.16:0,48,1269	1/1:1,13:14:33.11:615,33,0	1/1:4,19:23:57.19:1015,57,0	1/1:1,24:25:72.21:1304,72,0	1/1:1,22:23:48.16:896,48,0	0/0:20,0:20:51.16:0,51,1236	0/0:22,0:22:66.23:0,66,1748	0/0:16,0:16:48.16:0,48,1276	0/0:18,0:18:51.16:0,51,1302	0/0:23,0:23:63.22:0,63,1647	1/1:0,18:18:48.16:878,48,0	0/0:7,0:7:21.07:0,21,560
chr10	100126710	.	G	GT	1290.18	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.061;DP=677;FS=3.527;HRun=8;HaplotypeScore=70.9491;InbreedingCoeff=0.9426;MQ=72.98;MQ0=6;MQRankSum=-1.864;QD=21.87;ReadPosRankSum=-0.378;VQSLOD=3.8888;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,33:37:81.24:929,81,0	0/0:12,0:12:36.02:0,36,329	0/0:49,0:28:6.82:0,7,192	0/0:35,0:25:17.44:0,17,191	0/0:31,0:31:87.05:0,87,796	0/0:25,0:25:72.04:0,72,658	1/1:3,19:22:42.12:482,42,0	0/0:31,0:30:72.03:0,72,658	0/0:17,0:17:48.02:0,48,439	0/0:31,0:31:86.87:0,87,795	0/0:23,0:23:59.98:0,60,540	0/0:12,0:12:33.01:0,33,302	0/0:19,0:19:51.02:0,51,467	0/0:18,0:18:54:0,54,487	0/0:26,0:26:76.27:0,76,683	0/0:16,0:16:39.02:0,39,357	0/0:29,0:29:75.02:0,75,680	0/0:13,0:13:39.02:0,39,357	0/0:32,0:30:72.01:0,72,648	0/0:35,0:35:96.05:0,96,877	0/0:7,0:7:14.98:0,15,131	0/0:37,0:37:99:0,102,923	0/0:23,0:23:69.01:0,69,623	0/0:24,0:24:72.01:0,72,650	0/0:12,0:12:33.02:0,33,302	0/0:24,0:23:66.01:0,66,597	0/0:19,0:19:56.98:0,57,508	0/0:13,0:13:27.01:0,27,246
chr10	100127494	.	AC	A	3425.09	PASS	AB=0.781;AC=48;AF=0.857;AN=56;BaseQRankSum=-4.300;DP=436;FS=21.263;HRun=11;HaplotypeScore=60.6510;InbreedingCoeff=0.6120;MQ=77.62;MQ0=0;MQRankSum=-0.428;QD=8.90;ReadPosRankSum=5.552;VQSLOD=0.5536;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,1:24:8.40:0,8,188	0/1:2,6:9:14.17:66,0,14	0/0:23,0:17:22.96:0,23,165	0/1:17,0:13:5.19:5,0,39	1/1:9,3:15:29.64:196,30,0	1/1:7,8:15:15.01:121,15,0	0/0:4,0:4:5.84:0,6,39	1/1:10,8:18:22.08:159,22,0	1/1:3,8:12:12.50:83,12,0	1/1:8,7:16:28.16:210,28,0	1/1:5,2:10:17.81:100,18,0	1/1:0,6:7:17.02:129,17,0	1/1:7,11:19:6.30:180,6,0	1/1:11,4:16:27.23:175,27,0	1/1:4,15:19:22.39:194,22,0	1/1:7,8:15:14.26:122,14,0	1/1:11,5:20:34.85:203,35,0	1/1:14,5:22:39.36:247,39,0	1/1:7,5:13:16.94:120,17,0	1/1:3,5:8:8.97:74,9,0	1/1:10,7:17:9.81:60,10,0	1/1:7,7:14:14.91:117,15,0	1/1:4,6:12:15.89:98,16,0	1/1:13,21:34:26.89:222,27,0	1/1:5,8:13:14.96:122,15,0	1/1:7,6:13:25.29:183,25,0	1/1:7,10:18:11.18:65,11,0	1/1:5,8:13:20.96:172,21,0
chr10	100127956	.	A	AAC	5385.39	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.167;DP=671;FS=6.041;HRun=0;HaplotypeScore=136.2090;InbreedingCoeff=0.9933;MQ=73.14;MQ0=6;MQRankSum=-7.247;QD=29.75;ReadPosRankSum=-4.192;VQSLOD=5.4029;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:9,14:23:53.90:683,54,0	0/0:10,0:10:27.09:0,27,343	0/0:66,0:42:11.75:0,12,572	0/0:68,0:35:56.30:0,56,579	0/0:17,0:17:45.10:0,45,539	0/0:19,0:19:48.10:0,48,598	1/1:10,15:25:57.19:889,57,0	0/0:21,0:21:45.13:0,45,550	1/1:8,19:28:71.45:1054,71,0	0/0:25,0:25:72.20:0,72,901	0/0:15,0:15:36.11:0,36,458	0/0:16,0:16:48.15:0,48,608	0/0:20,0:20:53.94:0,54,647	0/0:19,0:19:40.20:0,40,668	0/0:21,0:21:57.07:0,57,679	0/0:23,0:23:63.18:0,63,791	0/0:30,0:30:66.53:0,67,766	1/1:6,5:11:23.93:325,24,0	1/1:11,4:16:36.05:536,36,0	1/1:7,12:19:48.11:650,48,0	1/1:23,22:44:25:765,25,0	0/0:20,0:20:51.15:0,51,634	0/0:20,0:20:57.17:0,57,712	0/0:35,0:35:90.17:0,90,1089	0/0:15,0:15:36.59:0,37,459	0/0:20,0:20:57.17:0,57,715	1/1:9,4:14:32.98:483,33,0	0/0:8,0:8:24.08:0,24,305
chr10	100127990	.	C	CAGAG	7521.25	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=3.049;DP=675;FS=1.291;HRun=0;HaplotypeScore=138.2248;InbreedingCoeff=0.9961;MQ=73.17;MQ0=5;MQRankSum=-8.662;QD=44.77;ReadPosRankSum=0.113;VQSLOD=5.0939;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,20:30:48.16:1202,48,0	0/0:10,0:10:27.09:0,27,494	0/0:46,0:39:69.46:0,69,1174	0/0:68,0:43:16.17:0,16,796	0/0:22,0:22:60.16:0,60,1038	0/0:19,0:19:54.19:0,54,992	1/1:4,17:22:48.15:1149,48,0	0/0:24,0:24:63.20:0,63,1090	1/1:5,16:23:36.12:945,36,0	0/0:32,0:32:84.25:0,84,1482	0/0:18,0:18:51.16:0,51,892	0/0:17,0:17:45.12:0,45,754	0/0:15,0:15:36.09:0,36,628	0/0:23,0:23:66.23:0,66,1213	0/0:20,0:20:48.15:0,48,852	0/0:24,0:24:72.25:0,72,1300	0/0:26,0:26:69.24:0,69,1257	1/1:4,4:9:17.96:300,18,0	1/1:4,19:24:57.16:1353,57,0	1/1:3,11:14:27.07:653,27,0	1/1:4,26:30:39.12:971,39,0	0/0:25,0:25:63.22:0,63,1143	0/0:26,0:26:66:0,66,1039	0/0:35,0:35:93.29:0,93,1664	0/0:21,0:21:60.19:0,60,1073	0/0:20,0:20:54.16:0,54,918	1/1:0,15:16:36.12:948,36,0	0/0:14,0:14:39.13:0,39,685
chr10	100128319	.	A	AC	2278.26	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.964;DP=581;FS=0.389;HRun=0;HaplotypeScore=98.6226;InbreedingCoeff=0.9847;MQ=64.22;MQ0=12;MQRankSum=-5.578;QD=15.19;ReadPosRankSum=6.671;VQSLOD=5.1676;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,5:19:43.26:317,43,0	0/0:7,0:7:18.03:0,18,203	0/0:80,0:23:34.91:0,35,320	0/0:57,0:29:10.27:0,10,278	0/0:23,0:21:53.86:0,54,537	0/0:18,0:18:51.95:0,52,569	1/1:10,10:20:32.43:289,32,0	0/0:11,0:11:16.27:0,16,166	1/1:9,8:17:37.46:301,37,0	0/0:21,0:20:53.07:0,53,526	0/0:15,0:15:40.26:0,40,449	0/0:13,0:13:35.68:0,36,313	0/0:14,0:14:41.47:0,41,358	0/0:11,0:11:29.96:0,30,296	0/0:7,0:7:21.02:0,21,242	0/0:14,0:14:39.60:0,40,363	0/0:23,1:24:36.72:0,37,585	1/1:9,11:20:25.21:318,25,0	1/1:17,5:22:14.65:239,15,0	1/1:6,13:19:39.72:391,40,0	1/1:6,6:11:29.47:214,29,0	0/0:12,0:12:25.49:0,25,316	0/0:19,0:19:49.81:0,50,542	0/0:17,0:17:42.19:0,42,479	0/0:26,0:25:64.24:0,64,678	0/0:26,0:26:62.65:0,63,647	1/1:5,16:21:54.20:417,54,0	0/0:16,0:16:47.95:0,48,478
chr10	100128321	.	A	AAAC	2774.66	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=9.166;DP=585;FS=0.000;HRun=0;HaplotypeScore=116.1540;InbreedingCoeff=0.7801;MQ=63.68;MQ0=13;MQRankSum=-2.803;QD=18.50;ReadPosRankSum=6.013;VQSLOD=3.1967;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:70.96:71,0,72	0/0:6,0:6:18.06:0,18,247	0/0:79,0:21:37.59:0,38,292	0/0:58,0:28:28.59:0,29,241	0/0:23,0:21:56.98:0,57,618	0/0:19,0:19:57.05:0,57,683	0/1:20,0:20:99:182,0,109	0/0:11,0:11:17.28:0,17,183	1/1:8,8:17:28.05:408,28,0	0/0:23,0:22:56.10:0,56,597	0/0:15,0:15:41.61:0,42,482	0/0:12,0:12:24.88:0,25,252	0/0:14,0:14:33.35:0,33,328	0/0:10,0:10:27.05:0,27,318	0/0:7,0:7:21.06:0,21,298	0/0:14,0:14:38.95:0,39,438	0/0:24,0:24:49.62:0,50,762	1/1:9,11:20:49.19:578,49,0	1/1:15,5:20:5.31:264,5,0	1/1:6,13:19:35.86:545,36,0	1/1:7,6:12:20.92:264,21,0	0/0:12,0:12:26.96:0,27,332	0/0:20,0:20:50.47:0,50,600	0/0:18,0:18:44.67:0,45,581	0/0:27,0:26:70.74:0,71,809	0/0:26,0:26:58.26:0,58,647	1/1:6,16:22:48.30:651,48,0	0/0:16,0:16:47.87:0,48,494
chr10	100128325	.	A	AAAC	357.10	PASS	AB=0.957;AC=6;AF=0.107;AN=56;BaseQRankSum=9.304;DP=582;FS=8.651;HRun=0;HaplotypeScore=124.1558;InbreedingCoeff=-0.1107;MQ=61.95;MQ0=13;MQRankSum=-5.234;QD=3.31;ReadPosRankSum=4.755;VQSLOD=1.5160;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:26.51:27,0,85	0/0:6,0:6:18.05:0,18,224	0/0:82,0:20:35.15:0,35,276	0/0:57,0:27:2.26:0,2,227	0/0:23,0:21:56.87:0,57,571	0/0:19,0:19:50.97:0,51,587	0/1:13,7:20:36.90:335,0,37	0/0:12,0:12:20.62:0,21,206	0/1:17,0:17:7.71:8,0,112	0/0:24,0:23:63.63:0,64,628	0/0:15,0:15:41.72:0,42,466	0/0:10,0:10:24.86:0,25,240	0/0:12,0:12:27.32:0,27,257	0/0:9,0:9:24.05:0,24,277	0/0:7,0:7:21.06:0,21,281	0/0:15,0:15:38.87:0,39,411	0/0:24,0:24:65.17:0,65,741	0/0:21,0:21:17.43:0,17,148	0/0:21,0:21:8.75:0,9,205	0/1:19,0:19:22.86:41,0,23	0/1:13,0:12:15.89:16,0,53	0/0:11,0:11:29.43:0,29,327	0/0:20,0:20:54.48:0,54,597	0/0:17,0:17:44.59:0,45,542	0/0:27,0:26:67.67:0,68,741	0/0:27,0:27:61.22:0,61,638	0/1:22,0:22:12.87:52,0,13	0/0:14,0:14:29.81:0,30,325
chr10	100128397	.	CA	C	1126.28	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.740;DP=460;FS=4.375;HRun=2;HaplotypeScore=75.5390;InbreedingCoeff=0.9708;MQ=71.45;MQ0=13;MQRankSum=-4.006;QD=13.25;ReadPosRankSum=1.082;VQSLOD=2.7597;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,12:15:22.31:476,22,0	0/0:6,0:6:18.06:0,18,266	0/0:58,0:30:34.54:0,35,553	0/0:46,0:18:14.48:0,14,183	0/0:18,0:18:54.17:0,54,779	0/0:16,0:15:42.13:0,42,598	0/0:16,0:16:7.07:0,7,49	0/0:14,0:14:42.12:0,42,561	1/1:13,0:13:31.86:178,32,0	0/0:15,0:15:42.13:0,42,595	0/0:17,0:17:16.76:0,17,558	0/0:12,0:12:33.09:0,33,450	0/0:11,0:11:33.11:0,33,488	0/0:14,0:14:42.14:0,42,598	0/0:13,0:13:36.12:0,36,535	0/0:12,0:12:36.11:0,36,516	0/0:15,0:15:45.13:0,45,644	1/1:14,1:15:37.78:264,38,0	1/1:12,0:12:21.53:110,22,0	1/1:5,2:7:16.24:98,16,0	1/1:10,1:10:16.07:109,16,0	0/0:13,0:13:36.10:0,36,496	0/0:13,0:13:36.07:0,36,471	0/0:20,0:20:54.11:0,54,727	0/0:15,0:15:45.13:0,45,626	0/0:22,0:22:63.20:0,63,904	1/1:11,1:12:21.69:89,22,0	0/0:8,0:8:24.06:0,24,336
chr10	100128406	.	C	CA	774.90	PASS	AB=0.991;AC=16;AF=0.286;AN=56;BaseQRankSum=11.059;DP=494;FS=3.050;HRun=8;HaplotypeScore=76.8597;InbreedingCoeff=0.7986;MQ=67.29;MQ0=13;MQRankSum=-4.080;QD=3.76;ReadPosRankSum=-0.898;VQSLOD=-0.4306;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:37.32:0,37,281	0/0:6,0:6:18.01:0,18,164	0/1:54,1:23:34.71:35,0,138	0/1:45,0:17:4.78:5,0,29	0/0:20,0:20:57.02:0,57,517	0/0:16,0:15:42.86:0,43,374	1/1:6,12:20:47.91:461,48,0	0/0:11,0:11:29.99:0,30,264	1/1:12,0:12:13.19:60,13,0	0/0:16,0:16:35.45:0,35,330	0/0:18,0:18:50.91:0,51,447	0/0:10,0:11:23.04:0,23,198	0/0:13,0:13:38.99:0,39,346	0/0:17,0:17:41.99:0,42,372	0/0:14,0:14:39:0,39,351	0/0:13,0:13:38.99:0,39,348	0/0:20,0:20:50.94:0,51,447	1/1:20,0:20:28.48:142,28,0	1/1:15,1:15:19.50:110,19,0	1/1:8,0:8:11.19:42,11,0	1/1:13,0:13:8.10:58,8,0	0/0:12,0:12:26.69:0,27,230	0/0:11,0:11:29.51:0,30,255	0/0:20,0:20:56.98:0,57,506	0/0:17,0:18:10.20:0,10,334	0/0:24,0:24:62.84:0,63,553	1/1:13,0:13:9.34:53,9,0	0/0:7,0:7:15:0,15,137
chr10	100128416	.	AAAC	A	2761.48	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.849;DP=479;FS=5.594;HRun=0;HaplotypeScore=79.3504;InbreedingCoeff=0.9795;MQ=61.87;MQ0=9;MQRankSum=-4.979;QD=20.46;ReadPosRankSum=1.505;VQSLOD=3.1635;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,16:24:33.11:475,33,0	0/0:8,0:8:21.06:0,21,371	0/0:40,0:17:15.04:0,15,225	0/0:37,0:16:15.94:0,16,256	0/0:20,0:20:57.20:0,57,1178	0/0:15,0:15:42.14:0,42,857	1/1:6,16:22:32.34:455,32,0	0/0:14,0:13:30.08:0,30,510	1/1:5,8:13:24.08:350,24,0	0/0:15,0:15:42.14:0,42,859	0/0:17,0:17:39.13:0,39,791	0/0:9,0:9:24.08:0,24,468	0/0:14,0:14:39.13:0,39,752	0/0:16,0:16:42.14:0,42,871	0/0:13,0:13:30.10:0,30,612	0/0:14,0:14:30.10:0,30,607	0/0:21,0:21:51.17:0,51,1031	1/1:4,16:20:33.11:486,33,0	1/1:7,12:18:36:474,36,0	1/1:2,5:7:9.03:133,9,0	1/1:2,14:16:21.02:284,21,0	0/0:11,0:11:30.10:0,30,618	0/0:11,0:11:30.10:0,30,604	0/0:20,0:20:57.20:0,57,1150	0/0:18,0:18:45.15:0,45,921	0/0:26,0:26:63.22:0,63,1273	1/1:4,10:14:21.54:310,22,0	0/0:5,0:5:15.05:0,15,311
chr10	100128967	.	C	CA	3881.18	PASS	AB=0.923;AC=13;AF=0.232;AN=56;BaseQRankSum=-9.425;DP=573;FS=2.836;HRun=7;HaplotypeScore=55.2878;InbreedingCoeff=0.9468;MQ=78.90;MQ0=0;MQRankSum=0.691;QD=28.12;ReadPosRankSum=1.304;VQSLOD=4.4241;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.05:0,90,851	0/0:12,0:12:26.96:0,27,248	0/0:16,0:16:30.02:0,30,277	0/0:18,0:17:27.72:0,28,340	0/0:27,0:27:75.11:0,75,718	0/0:20,0:20:51.08:0,51,492	0/0:22,0:22:60.05:0,60,562	0/0:25,0:25:51.06:0,51,484	1/1:3,20:23:63.19:760,63,0	0/0:20,0:19:51.07:0,51,492	0/0:21,0:21:54.08:0,54,521	0/0:15,0:15:39.06:0,39,377	0/0:12,0:12:33.05:0,33,319	0/0:16,0:16:48.08:0,48,463	0/0:18,0:18:51.07:0,51,487	0/1:11,1:12:0.18:0,0,283	0/0:32,0:32:93.13:0,93,892	1/1:1,16:17:48.15:580,48,0	1/1:3,10:13:33.07:380,33,0	1/1:4,29:34:87.07:1002,87,0	1/1:0,11:11:33.10:399,33,0	0/0:20,0:20:54.07:0,54,517	0/0:21,0:21:54.07:0,54,521	0/0:27,0:27:72.11:0,72,695	0/0:12,0:12:36.06:0,36,348	0/0:31,0:31:84.11:0,84,802	1/1:7,21:28:63.19:761,63,0	0/0:16,0:16:48.06:0,48,457
chr10	100129139	.	T	TTCTC	1006.98	PASS	AB=1.000;AC=29;AF=0.604;AN=48;BaseQRankSum=0.605;DP=539;FS=17.732;HRun=0;HaplotypeScore=121.8795;InbreedingCoeff=0.2870;MQ=69.43;MQ0=7;MQRankSum=1.000;QD=2.94;ReadPosRankSum=-3.843;VQSLOD=-0.0582;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:19:0.01:0,0,0	1/1:10,0:10:6.01:73,6,0	./.	./.	0/1:23,0:23:0:0,0,0	1/1:13,6:20:3.01:70,3,0	0/0:15,0:18:3.11:0,3,11	./.	1/1:13,0:13:9:90,9,0	0/1:23,0:23:0.19:82,0,0	1/1:14,0:14:2.99:24,3,0	1/1:12,0:12:5.99:49,6,0	0/1:12,0:12:17.37:17,0,37	0/0:14,0:16:5.84:0,6,53	0/0:18,0:18:12.03:0,12,163	0/1:23,0:23:7.08:7,0,211	./.	1/1:13,0:13:5.98:47,6,0	1/1:26,0:24:17.32:171,17,0	1/1:17,0:17:3.01:50,3,0	1/1:19,0:18:5.74:37,6,0	0/1:15,0:15:0:0,0,0	0/1:16,0:16:0:0,0,0	0/1:15,0:15:9.27:9,0,83	0/0:19,0:19:4.19:0,4,19	0/1:25,0:25:1.02:1,0,33	1/1:28,0:28:33:413,33,0	0/0:13,0:15:2.45:0,2,26
chr10	100129705	.	TTGTGTGTGTG	T	5188.10	PASS	AB=0.602;AC=13;AF=0.232;AN=56;BaseQRankSum=11.400;DP=684;FS=6.384;HRun=0;HaplotypeScore=193.4006;InbreedingCoeff=0.6938;MQ=65.55;MQ0=8;MQRankSum=-10.140;QD=24.59;ReadPosRankSum=0.618;VQSLOD=3.8197;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,19:32:63.33:624,0,63	0/0:16,0:16:45.15:0,45,2103	0/0:30,0:19:27.07:0,27,647	0/0:35,0:20:30.09:0,30,722	0/0:26,0:28:63.19:0,63,2431	0/0:18,0:18:42.13:0,42,1674	0/1:4,3:17:54.95:218,0,55	0/0:38,0:40:66.18:0,66,1951	1/1:7,22:29:32.90:975,33,0	0/0:27,0:27:72.24:0,72,2380	0/0:10,0:11:33.11:0,33,1177	0/0:27,0:28:75.26:0,75,3176	0/0:20,0:20:45.15:0,45,2159	0/0:17,0:17:48.16:0,48,2059	0/0:19,0:22:48.15:0,48,2007	0/0:17,0:20:51.16:0,51,1788	0/0:18,0:21:42.14:0,42,1709	1/1:1,11:12:15.05:459,15,0	1/1:11,15:24:19.33:977,19,0	1/1:6,19:25:26.95:542,27,0	0/1:14,24:37:39.93:221,0,40	0/0:27,0:30:63.17:0,63,2379	0/0:17,0:17:51.17:0,51,2139	0/0:21,0:21:57.20:0,57,2344	0/0:21,0:22:54.19:0,54,2051	0/0:35,0:34:87.28:0,87,3352	1/1:7,25:32:42.01:1172,42,0	0/0:14,0:14:27.09:0,27,882
chr10	100130473	.	G	GA	1657.57	PASS	AB=0.857;AC=5;AF=0.089;AN=56;BaseQRankSum=-8.843;DP=703;FS=5.707;HRun=9;HaplotypeScore=69.2120;InbreedingCoeff=0.7829;MQ=82.01;MQ0=0;MQRankSum=-1.655;QD=21.25;ReadPosRankSum=-0.901;VQSLOD=4.0939;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:7,31:38:38.54:851,39,0	0/1:5,1:6:18.18:18,0,89	0/0:21,0:22:39.85:0,40,341	0/0:21,0:21:31.94:0,32,283	0/0:24,0:24:62.97:0,63,547	0/0:26,0:26:65.94:0,66,565	1/1:4,30:34:84.20:918,84,0	0/0:31,0:31:68.96:0,69,599	0/0:23,0:23:62.95:0,63,541	0/0:21,0:21:62.99:0,63,547	0/0:22,0:22:53.94:0,54,469	0/0:21,0:21:56.97:0,57,495	0/0:32,1:33:53.80:0,54,696	0/0:23,0:23:50.93:0,51,433	0/0:32,0:33:89.02:0,89,761	0/0:23,0:23:59.97:0,60,521	0/0:24,0:24:57.46:0,57,496	0/0:16,0:16:44.99:0,45,390	0/0:24,0:25:68:0,68,574	0/0:30,0:31:80:0,80,679	0/0:33,2:35:56.78:0,57,722	0/0:23,0:24:61.99:0,62,524	0/0:18,0:18:50.99:0,51,443	0/0:33,0:33:83.96:0,84,729	0/0:20,0:20:47.98:0,48,417	0/0:26,0:26:65.98:0,66,573	0/0:31,0:32:95.02:0,95,813	0/0:17,0:18:50.03:0,50,423
chr10	100130562	.	GCACACACA	G	1582.73	PASS	AB=0.994;AC=8;AF=0.148;AN=54;BaseQRankSum=7.584;DP=648;FS=7.506;HRun=0;HaplotypeScore=169.3939;InbreedingCoeff=0.1820;MQ=56.37;MQ0=15;MQRankSum=-4.812;QD=9.89;ReadPosRankSum=0.016;VQSLOD=2.1921;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,1:27:5.01:344,0,5	0/0:12,0:12:20.93:0,21,555	./.	0/0:25,0:6:3.01:0,3,39	0/0:20,0:21:32.97:0,33,608	0/0:23,0:23:33.11:0,33,1224	1/1:20,18:41:34.25:716,34,0	0/0:26,0:24:34.42:0,34,477	0/1:16,0:16:36.01:92,0,36	0/0:34,0:34:77.88:0,78,2062	0/0:14,0:14:24.04:0,24,584	0/0:16,0:16:29.31:0,29,992	0/0:20,0:23:42.12:0,42,1408	0/0:15,0:15:31.52:0,32,694	0/0:20,0:21:39.06:0,39,1294	0/0:23,0:23:51.13:0,51,1577	0/0:30,0:35:69.17:0,69,2108	0/1:13,0:13:38.33:38,0,56	0/1:18,0:18:9.95:148,0,10	0/0:20,0:20:3.43:0,3,44	0/1:17,0:17:0.97:1,0,19	0/0:29,0:32:51.14:0,51,1489	0/0:23,0:23:21.03:0,21,509	0/0:30,0:34:63.15:0,63,1809	0/0:19,0:18:18.06:0,18,637	0/0:16,0:14:33.02:0,33,870	0/1:28,0:27:56.86:377,0,57	0/0:25,0:25:44.58:0,45,1203
chr10	100130589	.	CACACACACACAA	C	2525.45	PASS	AB=0.984;AC=13;AF=0.232;AN=56;BaseQRankSum=4.843;DP=686;FS=0.000;HRun=0;HaplotypeScore=223.0345;InbreedingCoeff=0.7004;MQ=51.51;MQ0=21;MQRankSum=-0.708;QD=13.51;ReadPosRankSum=-2.682;VQSLOD=1.6583;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:34:99:130,0,533	0/0:15,0:15:27.02:0,27,1014	0/0:24,0:3:9.02:0,9,124	0/0:26,0:10:26.85:0,27,260	0/0:19,0:19:33.29:0,33,1006	0/0:19,0:18:44.78:0,45,1963	0/1:38,0:38:17.47:17,0,445	0/0:41,0:39:54.41:0,54,1448	1/1:10,2:12:9.01:238,9,0	0/0:43,0:41:99:0,103,3740	0/0:20,0:17:40.04:0,40,1112	0/0:18,0:18:6.57:0,7,2012	0/0:20,0:20:39.83:0,40,2225	0/0:21,0:21:29.06:0,29,1471	0/0:19,0:19:43.91:0,44,2124	0/0:21,0:21:57.59:0,58,2270	0/0:41,0:41:96.13:0,96,3464	1/1:13,1:14:24.86:279,25,0	1/1:7,12:18:21.86:547,22,0	0/1:19,1:20:2.95:151,0,3	1/1:19,0:17:26.93:215,27,0	0/0:36,0:34:69.63:0,70,2645	0/0:19,0:19:36.49:0,36,1014	0/0:33,0:33:81.14:0,81,2983	0/0:16,0:15:30.01:0,30,1034	0/0:22,0:20:57.16:0,57,1885	1/1:23,7:29:58.84:1127,59,0	0/0:26,0:24:57.02:0,57,1855
chr10	100130696	.	G	GT	609.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.093;DP=612;FS=4.568;HRun=6;HaplotypeScore=58.8864;InbreedingCoeff=0.9889;MQ=80.94;MQ0=0;MQRankSum=-1.112;QD=29.00;ReadPosRankSum=-0.386;VQSLOD=4.1635;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:20:57.17:704,57,0	0/0:7,0:7:18.04:0,18,184	0/0:21,0:21:54.08:0,54,544	0/0:16,0:16:36.06:0,36,357	0/0:34,0:34:90.17:0,90,909	0/0:24,0:24:63.10:0,63,631	0/0:29,0:28:69.13:0,69,696	0/0:30,0:30:81.18:0,81,821	0/0:19,0:19:45.06:0,45,449	0/0:27,0:27:72.14:0,72,722	0/0:23,0:23:60.14:0,60,612	0/0:12,0:12:30.06:0,30,306	0/0:18,0:18:51.11:0,51,520	0/0:21,0:21:60.11:0,60,604	0/0:28,0:28:81.15:0,81,812	0/0:21,0:21:54.08:0,54,540	0/0:15,0:15:33.07:0,33,336	0/0:13,0:13:33.07:0,33,336	0/0:21,0:21:48.08:0,48,477	0/0:31,0:31:87.16:0,87,875	0/0:18,0:18:51.11:0,51,520	0/0:33,0:33:84.12:0,84,838	0/0:24,0:23:66.15:0,66,672	0/0:20,0:20:57.13:0,57,581	0/0:10,0:10:24.04:0,24,240	0/0:24,0:24:72.16:0,72,735	0/0:25,0:25:66.13:0,66,666	0/0:27,0:26:72.16:0,72,734
chr10	100130972	.	C	CTCTCCT	57.71	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=2.394;DP=478;FS=2.313;HRun=0;HaplotypeScore=120.5239;InbreedingCoeff=0.6974;MQ=39.46;MQ0=26;MQRankSum=-3.306;QD=3.85;ReadPosRankSum=-1.001;VQSLOD=2.4563;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,11:14:6.02:138,6,0	0/0:5,0:5:15.03:0,15,210	./.	0/0:52,0:2:6.02:0,6,96	0/0:14,0:14:32.31:0,32,526	0/0:13,0:12:24.07:0,24,397	0/0:16,0:15:15.03:0,15,235	0/0:18,0:17:24.06:0,24,413	0/0:10,0:10:29.98:0,30,496	0/0:14,0:12:22.98:0,23,341	0/0:19,0:19:36.08:0,36,542	0/0:11,0:10:21.07:0,21,312	0/0:18,0:17:30.09:0,30,453	0/0:15,0:15:30.07:0,30,447	0/0:14,0:14:30.06:0,30,456	0/0:15,0:15:30.10:0,30,472	0/0:15,0:14:29.92:0,30,314	0/0:6,0:6:12.03:0,12,193	0/0:12,0:12:29.48:0,29,328	0/0:13,0:13:17.22:0,17,383	0/0:17,0:15:18.06:0,18,307	0/0:13,0:13:33.07:0,33,491	0/0:10,0:10:23.91:0,24,305	0/0:23,0:22:30.06:0,30,412	0/0:10,0:10:26.26:0,26,371	0/0:10,0:10:11.90:0,12,142	0/0:18,0:18:26.09:0,26,641	0/0:20,0:19:45.12:0,45,653
chr10	100131022	.	T	TTC	96.46	PASS	AB=0.944;AC=8;AF=0.167;AN=48;BaseQRankSum=0.349;DP=182;FS=0.000;HRun=0;HaplotypeScore=106.5590;InbreedingCoeff=-0.0943;MQ=36.88;MQ0=0;MQRankSum=-2.946;QD=2.30;ReadPosRankSum=-5.556;VQSLOD=0.0573;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:12.02:0,12,138	0/0:3,0:3:9.02:0,9,104	./.	./.	0/0:8,0:8:16.35:0,16,220	0/0:11,0:10:23.13:0,23,298	./.	1/1:1,0:1:0.89:2,1,0	0/1:4,0:4:5.54:6,0,108	0/0:12,0:11:29.95:0,30,331	0/0:9,0:9:21.06:0,21,245	0/0:7,0:6:17.87:0,18,187	0/0:8,0:7:17.89:0,18,207	0/0:8,0:6:12.04:0,12,151	0/0:6,0:6:15.04:0,15,184	0/0:6,0:6:3.41:0,3,92	0/1:8,1:9:39.40:39,0,113	./.	0/1:3,0:3:16.17:16,0,71	0/0:9,0:9:2.33:0,2,215	0/1:4,1:4:31.67:59,0,32	0/0:10,0:10:21.28:0,21,289	0/0:10,0:9:24.02:0,24,259	0/1:13,1:14:63.61:64,0,76	0/0:6,0:6:3.13:0,3,109	0/0:4,0:4:8.95:0,9,77	0/1:6,0:6:25.30:25,0,112	0/0:12,0:11:18.05:0,18,205
chr10	100131044	.	C	CCTT	565.09	PASS	AB=1.000;AC=15;AF=0.313;AN=48;BaseQRankSum=3.625;DP=140;FS=0.000;HRun=0;HaplotypeScore=91.5447;InbreedingCoeff=0.6250;MQ=37.81;MQ0=0;MQRankSum=-3.414;QD=12.84;ReadPosRankSum=2.036;VQSLOD=2.9051;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:9.03:130,9,0	0/0:2,0:2:6.02:0,6,93	./.	./.	0/0:3,0:3:9.03:0,9,139	0/0:11,0:10:6.04:0,6,340	1/1:2,0:2:1.55:4,2,0	./.	1/1:4,1:5:8.88:95,9,0	0/0:10,0:9:24.08:0,24,367	0/0:6,0:6:18.03:0,18,211	0/0:2,0:1:3.01:0,3,39	0/0:7,0:6:9.03:0,9,141	0/0:4,0:2:3.01:0,3,48	0/0:6,0:6:9.02:0,9,105	0/0:1,0:1:3.01:0,3,48	0/0:7,0:7:8.88:0,9,87	./.	1/1:1,1:2:5.99:82,6,0	1/1:5,5:10:23.63:272,24,0	1/1:5,0:4:5.69:50,6,0	0/0:8,0:8:24.07:0,24,358	0/0:9,0:8:18.04:0,18,241	0/1:13,0:13:3.18:3,0,39	0/0:3,0:3:9.02:0,9,111	0/0:4,0:3:9.02:0,9,119	1/1:4,0:4:8.63:84,9,0	0/0:11,0:10:15.05:0,15,224
chr10	100131053	.	C	CCTT	390.87	PASS	AB=0.917;AC=15;AF=0.357;AN=42;BaseQRankSum=4.181;DP=116;FS=2.130;HRun=0;HaplotypeScore=75.1990;InbreedingCoeff=0.3409;MQ=35.59;MQ0=1;MQRankSum=-1.425;QD=7.98;ReadPosRankSum=2.014;VQSLOD=2.7602;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:8.88:94,9,0	./.	./.	./.	0/0:3,0:3:3.01:0,3,45	0/1:10,0:9:2.99:3,0,206	1/1:2,0:2:2.97:20,3,0	./.	0/1:2,1:3:10.41:50,0,10	0/0:9,0:8:15.01:0,15,197	0/0:5,0:5:2.96:0,3,19	0/0:2,0:1:3.01:0,3,38	0/0:4,0:3:5.98:0,6,65	0/0:3,0:1:3.01:0,3,45	./.	0/0:1,0:1:3.01:0,3,45	0/0:5,0:5:2.22:0,2,7	./.	1/1:3,1:3:5.61:68,6,0	1/1:4,5:9:16.97:184,17,0	1/1:5,0:4:5.85:50,6,0	0/0:7,0:7:15.05:0,15,224	0/0:6,0:5:9.03:0,9,135	1/1:10,0:10:3.08:45,3,0	./.	0/0:3,0:2:3.01:0,3,43	0/1:3,0:3:8.27:10,0,8	0/0:9,0:8:3.01:0,3,44
chr10	100131056	.	T	TCTC	270.75	PASS	AB=0.910;AC=11;AF=0.229;AN=48;BaseQRankSum=4.287;DP=110;FS=0.000;HRun=0;HaplotypeScore=69.7007;InbreedingCoeff=0.2577;MQ=34.42;MQ0=1;MQRankSum=-0.547;QD=6.77;ReadPosRankSum=4.983;VQSLOD=1.5054;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:3.89:40,4,0	0/0:2,0:2:6:0,6,51	./.	./.	0/0:3,0:3:9:0,9,101	0/0:10,0:9:23.35:0,23,319	0/1:2,0:2:0:0,0,0	./.	0/1:3,0:3:29.42:29,0,42	0/0:8,0:7:15.05:0,15,244	0/0:3,0:3:8.93:0,9,78	0/0:2,0:1:3.01:0,3,45	0/0:4,0:3:6.02:0,6,89	0/0:3,0:1:3.01:0,3,51	0/0:3,0:3:3:0,3,25	0/0:1,0:1:3.01:0,3,51	0/1:4,1:5:7.29:7,0,17	./.	1/1:3,0:2:6.02:70,6,0	0/1:8,0:8:3.66:76,0,4	0/1:3,2:4:8.80:80,0,9	0/0:7,0:7:18.05:0,18,280	0/0:6,0:5:12.03:0,12,178	1/1:6,3:10:8.84:96,9,0	0/0:2,0:2:5.94:0,6,43	0/0:2,0:1:3.01:0,3,51	0/0:3,0:3:5.99:0,6,51	0/0:9,0:8:11.96:0,12,119
chr10	100131262	.	T	TC	235.01	PASS	AB=0.500;AC=7;AF=0.500;AN=14;BaseQRankSum=-1.106;DP=32;FS=0.000;HRun=1;HaplotypeScore=19.1865;MQ=24.91;MQ0=0;MQRankSum=-1.931;QD=19.58;ReadPosRankSum=-0.382;VQSLOD=3.3165;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	0/0:2,0:2:1.25:0,1,3	./.	1/1:3,3:6:9.03:133,9,0	./.	./.	./.	./.	./.	./.	./.	./.	0/0:1,0:1:2.04:0,2,6	0/0:2,0:2:3.01:0,3,39	1/1:1,1:2:3.48:45,3,0	0/1:0,1:1:0:0,0,0	./.	./.	./.	./.	./.	1/1:0,3:3:9.03:135,9,0	./.
chr10	100131333	.	C	CCTT	897.59	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=7.695;DP=248;FS=82.839;HRun=0;HaplotypeScore=51.3125;InbreedingCoeff=0.8078;MQ=41.58;MQ0=10;MQRankSum=-7.199;QD=21.37;ReadPosRankSum=-1.341;VQSLOD=0.1570;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:7.35:97,7,0	./.	0/0:22,0:5:9.01:0,9,109	0/0:39,0:11:27.07:0,27,386	0/0:9,0:9:24.08:0,24,385	0/0:5,0:5:15.05:0,15,241	0/0:14,0:13:30.10:0,30,481	0/0:6,0:5:12.04:0,12,190	1/1:6,3:9:20.62:292,21,0	0/0:16,0:16:45.15:0,45,703	0/0:4,0:4:0.20:0,0,133	0/0:6,0:6:12.04:0,12,193	0/0:5,0:5:12.04:0,12,192	0/0:5,0:5:15.05:0,15,240	0/0:9,0:9:21.06:0,21,313	0/0:6,0:6:9.25:0,9,232	0/0:10,0:10:24.92:0,25,330	1/1:2,2:4:11.96:182,12,0	1/1:3,0:3:5.85:57,6,0	1/1:5,3:7:12.04:213,12,0	1/1:4,1:5:8.66:85,9,0	0/0:9,0:9:6.16:0,6,229	0/0:5,0:5:9.03:0,9,145	0/0:17,0:17:36.12:0,36,577	0/0:8,0:8:24.07:0,24,364	0/0:6,0:5:12.04:0,12,193	1/1:4,1:4:11.95:150,12,0	0/0:5,0:4:12.04:0,12,193
chr10	100131342	.	C	CCTT	739.40	PASS	AB=0.980;AC=15;AF=0.278;AN=54;BaseQRankSum=5.927;DP=251;FS=33.264;HRun=0;HaplotypeScore=49.8737;InbreedingCoeff=0.5346;MQ=42.46;MQ0=10;MQRankSum=-6.634;QD=11.20;ReadPosRankSum=-2.294;VQSLOD=1.1629;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,1:10:9.69:94,10,0	./.	0/0:16,0:2:5.97:0,6,64	0/0:36,0:10:17.42:0,17,218	0/0:12,0:12:30.09:0,30,430	0/0:5,0:5:15.05:0,15,225	0/0:12,0:12:32.31:0,32,439	0/0:5,0:4:9.03:0,9,127	1/1:5,3:8:8.41:187,8,0	0/0:15,0:15:45.15:0,45,677	0/1:4,0:4:36.38:36,0,123	0/0:5,0:5:12.04:0,12,180	0/0:5,0:5:12.04:0,12,180	0/0:5,0:5:15.05:0,15,225	0/0:10,0:10:21.07:0,21,315	0/1:7,0:7:18.69:19,0,224	0/0:10,0:10:24.97:0,25,363	1/1:2,2:4:8.39:126,8,0	0/1:4,0:3:0.43:1,0,0	1/1:3,3:6:9.03:159,9,0	0/1:8,1:9:2.44:106,0,2	0/1:9,0:9:19.59:20,0,255	0/0:7,0:7:15.01:0,15,200	0/0:17,0:17:39.09:0,39,561	0/0:9,0:9:27.08:0,27,388	0/0:6,0:5:12.04:0,12,180	1/1:4,0:4:11.98:161,12,0	0/0:6,0:5:15.03:0,15,204
chr10	100131366	.	C	CCTT	261.40	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=5.853;DP=293;FS=33.752;HRun=0;HaplotypeScore=59.6720;InbreedingCoeff=0.2860;MQ=56.00;MQ0=4;MQRankSum=-4.472;QD=5.94;ReadPosRankSum=-2.224;VQSLOD=0.3817;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,7:11:21.01:347,21,0	0/0:2,0:2:3.01:0,3,51	0/1:21,0:8:4.21:4,0,221	0/0:30,0:10:14.60:0,15,195	0/0:15,0:15:42.13:0,42,686	0/0:8,0:8:24.08:0,24,403	0/0:12,0:11:24.56:0,25,445	0/0:11,0:10:24.07:0,24,407	0/0:10,0:10:18.13:0,18,279	0/0:16,0:15:42.14:0,42,716	0/0:5,0:5:7.01:0,7,197	0/0:8,0:8:18.05:0,18,280	0/0:6,0:6:18.06:0,18,306	0/0:11,0:11:32.85:0,33,517	0/0:10,0:10:30.10:0,30,508	0/0:9,0:9:7.48:0,7,388	0/0:11,0:11:31.35:0,31,513	0/1:5,0:5:14.72:15,0,92	0/0:2,0:1:3.01:0,3,49	0/0:6,0:6:8.55:0,9,115	0/0:13,0:13:29.80:0,30,404	0/0:12,0:12:15.48:0,15,420	0/0:9,0:9:24.08:0,24,409	0/0:20,0:19:51.17:0,51,857	0/0:10,0:9:30.03:0,30,475	0/0:6,0:5:15.05:0,15,256	0/1:7,0:6:1.70:2,0,162	0/0:6,0:6:18.04:0,18,279
chr10	100132797	.	GCT	G	658.11	PASS	AB=0.952;AC=20;AF=0.400;AN=50;BaseQRankSum=2.477;DP=563;FS=6.568;HRun=0;HaplotypeScore=80.3496;InbreedingCoeff=-0.3651;MQ=69.14;MQ0=12;MQRankSum=1.053;QD=1.81;ReadPosRankSum=0.265;VQSLOD=1.0608;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:24:3.51:77,0,4	0/0:11,0:10:6.02:0,6,83	./.	./.	0/1:27,1:28:51.66:52,0,129	0/1:18,0:18:37.96:58,0,38	0/0:16,0:14:5.92:0,6,40	0/0:29,0:29:1.25:0,1,3	0/1:19,1:29:65.11:65,0,119	0/1:24,0:24:15.07:15,0,186	0/0:13,0:13:8.96:0,9,70	0/1:11,0:11:27.50:27,0,92	0/1:14,2:16:61.67:62,0,73	0/1:14,0:14:15.49:15,0,135	0/1:17,0:17:19.98:20,0,139	0/1:7,10:17:76.14:76,0,97	0/1:22,7:29:5.49:5,0,233	0/0:12,0:11:8.95:0,9,70	0/1:23,0:22:8.41:8,0,120	./.	0/1:23,0:22:14.90:15,0,145	0/0:13,0:13:11.98:0,12,98	1/1:12,0:12:11.94:92,12,0	1/1:12,9:20:9.49:98,9,0	0/1:11,0:11:24.92:67,0,25	0/1:24,0:22:40.78:41,0,148	0/0:26,0:26:2.05:0,2,196	0/1:17,0:17:10.33:10,0,85
chr10	100133132	.	GTATA	G	924.30	PASS	AB=1.000;AC=5;AF=0.093;AN=54;BaseQRankSum=5.604;DP=258;FS=0.861;HRun=0;HaplotypeScore=47.5731;InbreedingCoeff=0.3735;MQ=62.09;MQ0=0;MQRankSum=-0.583;QD=26.41;ReadPosRankSum=2.383;VQSLOD=3.1928;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,21:26:54.18:921,54,0	0/0:3,0:4:8.82:0,9,163	./.	0/1:5,0:4:18.08:18,0,29	0/0:20,0:21:41.93:0,42,958	0/0:4,0:15:30.09:0,30,499	1/1:0,4:4:6.02:102,6,0	0/0:30,0:30:75.24:0,75,1822	0/0:4,0:4:9.03:0,9,223	0/0:11,0:11:30.10:0,30,679	0/0:5,0:7:11.83:0,12,216	0/0:3,0:3:9.03:0,9,222	0/0:5,0:5:15.05:0,15,345	0/0:3,0:3:3.01:0,3,75	0/0:1,0:1:3.01:0,3,75	0/0:1,0:3:6.02:0,6,106	0/0:16,0:17:44.94:0,45,1065	0/0:15,0:17:35.70:0,36,777	0/0:11,0:11:27.08:0,27,619	0/0:4,0:4:3.01:0,3,75	0/0:2,0:2:3.01:0,3,44	0/0:3,0:3:3.01:0,3,75	0/0:1,0:1:3.01:0,3,75	0/0:2,0:2:3.01:0,3,75	0/0:10,0:10:24.08:0,24,602	0/0:11,0:11:21.06:0,21,476	0/0:10,0:11:23.87:0,24,521	0/0:25,0:25:63.22:0,63,1577
chr10	100134216	.	GGTGT	G	1233.12	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.455;DP=682;FS=2.584;HRun=0;HaplotypeScore=109.4092;InbreedingCoeff=0.9973;MQ=86.06;MQ0=0;MQRankSum=-3.818;QD=44.04;ReadPosRankSum=0.617;VQSLOD=4.3151;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:72.19:1328,72,0	0/0:10,0:10:24.07:0,24,592	0/0:28,0:28:78.26:0,78,1973	0/0:27,0:27:40.19:0,40,1661	0/0:37,0:37:99:0,111,2874	0/0:22,0:22:66.21:0,66,1636	0/0:19,0:19:57.18:0,57,1451	0/0:25,0:25:75.25:0,75,1911	0/0:27,0:27:81.23:0,81,1934	0/0:31,0:31:87.29:0,87,2248	0/0:30,0:30:84.29:0,84,2266	0/0:16,0:16:48.14:0,48,1183	0/0:30,0:30:84.29:0,84,2236	0/0:23,0:23:66.21:0,66,1722	0/0:19,0:19:51.16:0,51,1257	0/0:27,0:27:78.25:0,78,2018	0/0:12,0:12:30.10:0,30,772	0/0:20,0:19:57.20:0,57,1505	0/0:18,0:18:54.18:0,54,1404	0/0:39,0:39:99:0,117,3153	0/0:31,0:31:93.29:0,93,2316	0/0:23,0:23:66.19:0,66,1604	0/0:17,0:17:51.18:0,51,1343	0/0:24,0:24:69.24:0,69,1840	0/0:35,0:35:96.32:0,96,2518	0/0:24,0:24:69.22:0,69,1744	0/0:27,0:27:81.26:0,81,2072	0/0:13,0:13:39.13:0,39,1052
chr10	100134516	.	A	AT	6551.30	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-15.609;DP=597;FS=5.070;HRun=8;HaplotypeScore=56.1213;InbreedingCoeff=0.9974;MQ=79.12;MQ0=2;MQRankSum=-2.542;QD=27.18;ReadPosRankSum=-1.465;VQSLOD=5.0553;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:78.03:0,78,714	0/0:15,0:15:39.02:0,39,357	0/0:22,0:19:42.43:0,42,442	0/0:17,0:16:27.45:0,27,245	0/0:22,0:22:60.03:0,60,549	1/1:0,24:24:54.16:623,54,0	0/0:11,0:11:33.02:0,33,302	1/1:3,31:34:90.24:1018,90,0	1/1:2,17:19:51.15:589,51,0	0/0:24,0:24:63.03:0,63,577	0/0:22,0:22:60.02:0,60,549	0/0:19,0:19:57.03:0,57,522	0/0:18,0:18:54.01:0,54,489	0/0:19,0:19:51.03:0,51,467	0/0:21,0:21:54.03:0,54,494	1/1:1,11:12:30.09:346,30,0	0/0:20,0:20:54.02:0,54,494	1/1:3,17:20:48.14:554,48,0	1/1:5,6:12:17.89:188,18,0	1/1:4,26:30:70.05:781,70,0	1/1:1,21:22:51.15:589,51,0	0/0:18,0:18:38.30:0,38,356	0/0:24,0:24:60.02:0,60,549	0/0:14,0:14:42:0,42,379	0/0:34,0:34:96.03:0,96,873	1/1:1,26:27:53.76:864,54,0	1/1:4,24:28:69.21:796,69,0	1/1:4,9:13:18.05:205,18,0
chr10	100134877	.	G	GA	848.14	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.950;DP=455;FS=2.087;HRun=4;HaplotypeScore=46.7273;InbreedingCoeff=0.9472;MQ=89.51;MQ0=0;MQRankSum=-2.350;QD=29.25;ReadPosRankSum=1.059;VQSLOD=3.2136;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:29:69.23:943,69,0	0/0:10,0:10:30.09:0,30,339	0/0:19,0:19:51.14:0,51,571	0/0:18,0:18:45.02:0,45,482	0/0:25,0:25:75.18:0,75,831	0/0:19,0:19:45.11:0,45,501	0/0:13,0:13:36.10:0,36,408	0/0:25,0:25:66.19:0,66,747	0/0:14,0:14:39.09:0,39,433	0/0:15,0:15:42.12:0,42,476	0/0:13,0:13:30.08:0,30,338	0/0:12,0:12:33.08:0,33,365	0/0:17,0:17:45.11:0,45,500	0/0:4,0:4:12.03:0,12,136	0/0:11,0:11:33.01:0,33,348	0/0:12,0:12:24.07:0,24,272	0/0:22,0:22:63.14:0,63,692	0/0:8,0:8:18.05:0,18,205	0/0:24,0:24:72.21:0,72,816	0/0:20,0:20:57.16:0,57,646	0/0:30,0:30:81.21:0,81,907	0/0:8,0:8:18.05:0,18,204	0/0:10,0:10:27.08:0,27,306	0/0:19,0:19:54.14:0,54,603	0/0:12,0:12:36.10:0,36,408	0/0:19,0:19:51.14:0,51,570	0/0:20,0:20:51.10:0,51,562	0/0:7,0:7:21.06:0,21,238
chr10	100134961	.	CT	C	844.96	PASS	AB=0.976;AC=19;AF=0.339;AN=56;BaseQRankSum=4.763;DP=320;FS=10.884;HRun=10;HaplotypeScore=53.5117;InbreedingCoeff=0.6546;MQ=74.57;MQ0=3;MQRankSum=-1.722;QD=6.60;ReadPosRankSum=-0.372;VQSLOD=0.3491;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:7.25:0,7,71	0/0:4,0:4:9.02:0,9,99	0/0:27,0:14:7.31:0,7,190	0/0:19,0:8:10.34:0,10,57	0/0:9,0:9:21.05:0,21,229	1/1:9,0:9:14.02:86,14,0	0/0:10,0:10:27.03:0,27,281	1/1:14,0:14:20.54:128,21,0	1/1:9,1:11:1.24:114,1,0	0/0:20,0:21:56.96:0,57,597	0/0:13,0:14:24.05:0,24,257	0/0:7,0:7:16.48:0,16,146	0/0:8,0:8:18.02:0,18,188	0/0:3,0:3:6.01:0,6,62	0/0:10,0:10:24.06:0,24,265	1/1:6,0:6:9.22:57,9,0	0/0:17,0:17:39.99:0,40,431	0/1:9,0:8:0.55:15,0,1	0/1:15,0:15:13.09:147,0,13	1/1:16,1:17:28.56:175,29,0	1/1:3,1:4:5.94:46,6,0	0/0:6,0:6:12.03:0,12,133	0/0:10,0:10:24.02:0,24,247	0/0:6,0:6:12.03:0,12,133	0/0:10,0:10:17.92:0,18,169	0/1:12,1:13:30.47:104,0,30	1/1:23,0:23:7.58:92,8,0	1/1:7,0:7:11.66:70,12,0
chr10	100134968	.	T	TTTC	1229.25	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=7.343;DP=312;FS=17.840;HRun=0;HaplotypeScore=61.7164;InbreedingCoeff=0.5609;MQ=72.23;MQ0=7;MQRankSum=-1.958;QD=9.11;ReadPosRankSum=0.822;VQSLOD=1.0216;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:6.34:6,0,118	0/0:3,0:3:9.03:0,9,141	0/0:32,0:13:15.61:0,16,282	0/0:20,0:9:10.81:0,11,92	0/0:8,0:8:21.07:0,21,330	1/1:8,0:8:5.14:152,5,0	0/0:11,0:11:32.98:0,33,433	0/1:18,0:17:26.93:114,0,27	1/1:9,0:9:9.99:109,10,0	0/0:21,0:21:59.84:0,60,819	0/0:14,0:14:28.48:0,28,387	0/0:6,0:6:18.03:0,18,202	0/0:9,0:9:16.75:0,17,261	0/0:2,0:2:6.02:0,6,77	0/0:9,0:9:24.08:0,24,377	1/1:6,0:6:11.70:113,12,0	0/0:14,0:14:41.81:0,42,600	1/1:2,6:7:5.69:73,6,0	0/1:18,0:18:50.11:105,0,50	1/1:17,0:17:13.25:255,13,0	1/1:3,0:3:4.71:41,5,0	0/0:5,0:5:12.04:0,12,174	0/0:10,0:10:24.03:0,24,331	0/0:5,0:5:12.04:0,12,173	0/0:8,0:8:20.98:0,21,266	0/1:13,0:13:83.39:83,0,89	1/1:19,0:19:6.36:201,6,0	1/1:4,1:5:12.04:164,12,0
chr10	100134969	.	T	TTC	1945.26	PASS	AB=0.624;AC=20;AF=0.357;AN=56;BaseQRankSum=6.639;DP=311;FS=32.268;HRun=0;HaplotypeScore=55.3719;InbreedingCoeff=0.6553;MQ=70.63;MQ0=8;MQRankSum=-2.578;QD=16.08;ReadPosRankSum=0.167;VQSLOD=1.7095;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:21.68:0,22,160	0/0:3,0:3:9.03:0,9,128	0/0:32,1:13:26.83:0,27,295	0/0:19,0:8:12.83:0,13,87	0/0:9,0:9:21.07:0,21,299	1/1:1,7:8:7.11:237,7,0	0/0:11,0:11:32.96:0,33,397	1/1:6,11:17:1.01:244,1,0	1/1:8,1:9:2.10:126,2,0	0/0:22,0:22:59.76:0,60,767	0/0:14,0:14:33.43:0,33,398	0/0:6,0:6:18.03:0,18,205	0/0:9,0:9:20.10:0,20,253	0/0:2,0:2:6.02:0,6,73	0/0:9,0:9:24.08:0,24,341	1/1:1,4:5:12.04:180,12,0	0/0:14,0:14:42.11:0,42,569	1/1:8,0:7:6.01:60,6,0	0/1:5,11:18:18.97:163,0,19	1/1:3,13:16:20.19:426,20,0	1/1:2,1:3:4.70:56,5,0	0/0:5,0:5:12.04:0,12,161	0/0:10,0:10:24.04:0,24,318	0/0:5,0:5:12.04:0,12,169	0/0:8,0:8:20.81:0,21,240	0/1:6,5:12:63.23:125,0,63	1/1:5,11:19:5.75:332,6,0	1/1:1,4:5:12.04:183,12,0
chr10	100142726	.	T	TC	681.40	PASS	AC=14;AF=0.875;AN=16;DP=91;FS=0.000;HRun=0;HaplotypeScore=20.2838;MQ=31.53;MQ0=34;QD=22.71;VQSLOD=4.5032;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,1:1:2.94:18,3,0	./.	./.	0/0:2,4:4:0:0,0,0	./.	./.	./.	./.	1/1:3,2:3:9.03:137,9,0	1/1:0,4:4:11.87:129,12,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,6:6:18.06:286,18,0	./.	1/1:1,2:2:3.01:48,3,0	1/1:2,5:5:11.72:69,12,0	./.	1/1:0,3:3:5.95:66,6,0	./.	./.	./.
chr10	100145029	.	TA	T	532.89	PASS	AB=0.889;AC=3;AF=0.054;AN=56;BaseQRankSum=4.625;DP=460;FS=2.534;HRun=10;HaplotypeScore=49.2573;InbreedingCoeff=0.5289;MQ=71.60;MQ0=3;MQRankSum=0.722;QD=11.10;ReadPosRankSum=1.668;VQSLOD=2.5616;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,28:32:71.98:625,72,0	0/0:4,0:4:12.03:0,12,133	0/0:23,1:14:19.19:0,19,120	0/0:24,0:14:1.54:0,2,170	0/0:22,0:22:60.15:0,60,654	0/0:17,0:17:42.11:0,42,457	0/0:8,0:8:24.05:0,24,256	0/0:30,0:31:75.13:0,75,807	0/0:8,0:8:21.06:0,21,232	0/0:24,0:24:54.14:0,54,591	0/0:18,0:19:44.94:0,45,470	0/0:8,0:8:24.06:0,24,265	0/0:3,0:3:9.02:0,9,99	0/0:14,0:14:36.07:0,36,382	0/0:9,0:9:24.06:0,24,265	0/0:9,0:9:21.06:0,21,232	0/1:14,2:16:9.99:10,0,356	0/0:15,0:15:16.34:0,16,396	0/0:22,0:22:37.19:0,37,601	0/0:19,0:19:48.11:0,48,515	0/0:8,0:8:21.04:0,21,223	0/0:8,0:8:18.04:0,18,192	0/0:14,0:14:39.06:0,39,418	0/0:13,0:13:36.10:0,36,398	0/0:24,0:24:63.12:0,63,674	0/0:19,0:19:45.12:0,45,498	0/0:26,0:26:72.18:0,72,782	0/0:19,0:19:54.11:0,54,579
chr10	100149012	.	A	ACTT	1201.86	PASS	AB=1.000;AC=32;AF=0.667;AN=48;BaseQRankSum=0.684;DP=667;FS=5.050;HRun=0;HaplotypeScore=111.9422;InbreedingCoeff=0.4195;MQ=58.43;MQ0=5;MQRankSum=-0.877;QD=2.78;ReadPosRankSum=-2.777;VQSLOD=1.4756;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:22:11.10:11,0,66	0/1:12,0:12:16.49:16,0,18	./.	./.	1/1:27,6:33:12.81:124,13,0	1/1:26,0:25:15.34:111,15,0	1/1:12,0:12:2.60:10,3,0	./.	1/1:33,0:33:9.39:65,9,0	0/0:37,0:38:12.02:0,12,264	0/0:21,0:21:19.78:0,20,185	0/1:24,0:24:14.11:19,0,14	0/0:21,0:22:14.64:0,15,188	0/0:18,0:22:1.41:0,1,79	1/1:10,1:15:5.90:38,6,0	1/1:19,0:19:14.89:110,15,0	0/1:23,0:23:25.05:45,0,25	0/0:19,0:19:8.21:0,8,50	1/1:21,0:21:6.85:48,7,0	1/1:36,0:36:8.90:63,9,0	./.	1/1:14,4:18:5.52:27,6,0	1/1:21,5:30:3.01:53,3,0	1/1:14,2:16:15.02:206,15,0	0/0:30,0:30:12.04:0,12,145	1/1:36,0:34:7.79:155,8,0	1/1:34,0:34:26.84:183,27,0	1/1:22,0:21:9:83,9,0
chr10	100149871	.	G	GCA	4723.36	PASS	AB=0.769;AC=15;AF=0.268;AN=56;BaseQRankSum=11.167;DP=849;FS=0.370;HRun=0;HaplotypeScore=161.6428;InbreedingCoeff=0.2101;MQ=60.41;MQ0=12;MQRankSum=0.428;QD=14.10;ReadPosRankSum=-0.304;VQSLOD=4.7607;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,10:40:53.20:722,53,0	0/0:7,0:8:17.89:0,18,199	0/0:40,0:19:26.81:0,27,259	0/0:41,0:25:38.96:0,39,446	0/0:29,0:29:72.65:0,73,862	0/1:20,5:25:72.17:72,0,79	0/0:26,0:26:68.97:0,69,793	0/1:24,1:24:34.71:78,0,35	0/1:19,12:32:10.97:571,0,11	0/0:37,0:37:90.27:0,90,1105	0/0:24,0:24:59.67:0,60,694	0/0:38,0:38:79.52:0,80,1006	0/0:33,0:33:84.14:0,84,1003	0/0:36,0:36:93.27:0,93,1132	0/0:39,0:39:99:0,99,1199	0/1:22,11:33:33.82:632,0,34	0/0:35,0:35:66.46:0,66,839	1/1:14,12:26:36.77:618,37,0	1/1:6,4:10:11.51:156,12,0	0/1:8,9:18:6.45:165,0,6	0/1:43,6:48:12.51:547,0,13	0/0:31,0:31:74.42:0,74,866	0/0:18,0:18:46.96:0,47,553	0/0:51,0:50:99:0,120,1430	0/0:25,0:25:57.18:0,57,705	0/1:15,9:28:30.66:360,0,31	0/1:25,7:32:43.95:463,0,44	0/1:7,10:17:39.29:340,0,39
chr10	100149884	.	CAT	C	2664.74	PASS	AB=0.987;AC=16;AF=0.286;AN=56;BaseQRankSum=1.855;DP=891;FS=3.153;HRun=0;HaplotypeScore=170.7355;InbreedingCoeff=0.0690;MQ=55.76;MQ0=20;MQRankSum=-0.553;QD=6.70;ReadPosRankSum=-9.836;VQSLOD=0.7580;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:43,1:44:16.34:183,0,16	0/0:7,0:7:5.03:0,5,256	0/0:44,0:15:14.13:0,14,213	0/0:45,0:22:42.25:0,42,415	0/0:26,0:26:66.48:0,66,1196	0/1:24,0:23:73.43:112,0,73	0/1:31,1:32:16.05:16,0,909	1/1:32,0:31:0.13:454,0,0	0/1:31,1:32:57.31:176,0,57	0/0:37,0:36:70.90:0,71,1346	0/0:26,0:26:22.16:0,22,1026	0/0:35,0:36:77.76:0,78,1386	0/0:30,0:30:78.47:0,78,1330	0/0:36,0:36:88.28:0,88,1531	0/0:43,0:43:53.49:0,53,1524	0/1:37,0:37:99:162,0,107	0/0:35,0:35:55.57:0,56,1191	0/1:28,0:28:32.86:148,0,33	1/1:10,0:9:13.33:87,13,0	0/1:19,0:19:6.95:103,0,7	1/1:55,2:56:42.05:648,42,0	0/0:33,0:33:43.67:0,44,1135	0/0:20,0:20:25.11:0,25,677	0/0:54,0:53:99:0,126,1983	0/0:21,0:21:56.40:0,56,920	0/1:30,0:29:30.55:361,0,31	0/1:30,0:31:86.69:241,0,87	0/1:21,1:21:62.26:141,0,62
chr10	100151374	.	GA	G	4415.86	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=8.308;DP=444;FS=9.841;HRun=9;HaplotypeScore=47.1725;InbreedingCoeff=0.9868;MQ=83.68;MQ0=0;MQRankSum=-0.796;QD=24.13;ReadPosRankSum=-1.182;VQSLOD=4.7811;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:21:51.28:0,51,268	0/0:12,0:12:36.11:0,36,415	0/0:21,0:20:46.98:0,47,462	0/0:11,0:11:19.77:0,20,202	0/0:16,0:16:48.14:0,48,554	1/1:0,15:15:45.02:412,45,0	0/0:13,0:13:39.12:0,39,450	1/1:2,22:24:65.93:584,66,0	1/1:0,13:13:33.02:302,33,0	0/0:20,0:20:51.15:0,51,589	0/0:19,0:19:54.16:0,54,623	0/0:13,0:13:39.10:0,39,440	0/0:13,0:14:32.92:0,33,352	0/0:19,0:19:51.15:0,51,588	0/0:8,0:8:24.07:0,24,277	1/1:1,18:19:48.03:439,48,0	0/0:15,0:15:45.11:0,45,507	1/1:2,21:23:63.03:576,63,0	1/1:1,16:17:48.01:434,48,0	1/1:1,15:16:42.01:384,42,0	1/1:0,11:11:27.01:247,27,0	0/0:16,0:16:48.14:0,48,548	0/0:15,0:15:39.12:0,39,450	0/0:10,1:13:8.33:0,8,313	0/0:15,0:15:45.13:0,45,515	1/1:2,13:15:39:351,39,0	1/1:2,21:23:60.03:549,60,0	1/1:1,6:7:15.01:137,15,0
chr10	100151978	.	TTCTA	T	1250.27	PASS	AB=0.989;AC=13;AF=0.250;AN=52;BaseQRankSum=5.358;DP=635;FS=0.661;HRun=0;HaplotypeScore=114.0985;InbreedingCoeff=0.6814;MQ=58.70;MQ0=2;MQRankSum=0.466;QD=7.35;ReadPosRankSum=2.861;VQSLOD=2.3335;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:11:5.87:40,6,0	0/0:5,0:5:9.03:0,9,188	./.	./.	0/0:27,0:34:45.10:0,45,833	0/0:19,0:19:39.12:0,39,845	0/0:12,0:12:15.04:0,15,289	0/0:35,0:35:6.02:0,6,108	0/0:23,0:22:27.09:0,27,553	0/0:50,1:49:35.05:0,35,1740	0/0:27,0:27:51.15:0,51,1056	0/0:25,0:26:44.87:0,45,1005	0/0:29,0:30:51.15:0,51,1066	0/1:23,0:23:0.80:1,0,468	0/0:24,0:23:36.12:0,36,835	0/0:30,0:30:17.29:0,17,486	0/0:36,1:35:42.14:0,42,909	0/0:16,0:16:28.34:0,28,612	1/1:14,7:20:21.07:311,21,0	1/1:19,5:24:30.10:449,30,0	1/1:9,1:7:4.56:90,5,0	0/0:11,0:11:21.07:0,21,477	0/0:21,0:21:27.09:0,27,632	0/1:27,1:27:10.11:10,0,689	0/1:27,0:27:0.40:0,0,804	0/0:24,0:36:69.14:0,69,1049	1/1:16,8:24:33.11:508,33,0	0/0:8,0:9:9:0,9,100
chr10	100152060	.	TCTTTCTTC	T	903.41	PASS	AB=0.992;AC=9;AF=0.161;AN=56;BaseQRankSum=3.743;DP=526;FS=0.587;HRun=0;HaplotypeScore=146.8813;InbreedingCoeff=0.1183;MQ=62.07;MQ0=7;MQRankSum=1.162;QD=7.41;ReadPosRankSum=-5.603;VQSLOD=-0.0668;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:8:8.48:0,8,50	0/0:5,0:5:15.05:0,15,623	0/0:15,0:9:18.32:0,18,182	0/1:13,0:9:6.17:6,0,53	0/0:28,0:28:75.07:0,75,2515	0/0:22,0:21:18:0,18,105	0/0:16,0:15:36.08:0,36,907	1/1:6,19:24:42.02:705,42,0	0/1:15,1:16:1.85:2,0,72	0/0:27,0:27:72.19:0,72,1929	0/0:21,0:21:54.17:0,54,1670	0/0:18,0:18:39.09:0,39,1084	0/0:28,0:28:72.11:0,72,1825	0/0:24,0:24:64.97:0,65,1961	0/0:24,0:24:66.18:0,66,2043	0/0:23,0:23:15.16:0,15,128	0/0:31,0:30:77.80:0,78,2049	0/1:15,0:15:99:101,0,106	0/1:9,0:9:8.49:90,0,8	0/1:13,0:13:36.14:36,0,55	0/1:9,0:8:9.27:9,0,75	0/0:10,0:10:27.05:0,27,833	0/0:14,0:14:36.10:0,36,1120	0/0:26,0:26:69.12:0,69,1890	0/0:19,0:18:48.14:0,48,1515	0/1:22,0:21:93.24:93,0,198	0/0:31,0:29:27.72:0,28,158	0/0:10,0:10:8.63:0,9,46
chr10	100152064	.	TCTTC	T	5023.73	PASS	AB=0.792;AC=23;AF=0.411;AN=56;BaseQRankSum=8.806;DP=508;FS=0.826;HRun=0;HaplotypeScore=93.9743;InbreedingCoeff=0.8494;MQ=62.58;MQ0=6;MQRankSum=-0.892;QD=25.90;ReadPosRankSum=1.659;VQSLOD=4.8192;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:8:8.40:31,8,0	0/0:6,0:6:18.05:0,18,423	0/0:16,0:10:21.35:0,21,207	0/0:13,0:9:8.69:0,9,123	0/0:25,0:25:48.62:0,49,1497	1/1:1,18:18:27.09:507,27,0	0/0:15,0:14:36.06:0,36,610	1/1:22,0:21:41.98:535,42,0	1/1:1,15:16:27.05:450,27,0	0/0:26,0:26:75.16:0,75,1271	0/0:22,0:22:63.11:0,63,1051	0/0:18,0:18:42.05:0,42,753	0/0:29,0:29:78.02:0,78,1174	0/0:24,0:24:67.97:0,68,1341	0/0:24,0:24:42.18:0,42,1287	1/1:1,20:21:2.77:322,3,0	0/0:30,0:29:77.80:0,78,1335	1/1:10,4:14:4.04:452,4,0	1/1:7,1:8:23.98:287,24,0	1/1:0,13:13:38.84:502,39,0	1/1:4,5:8:24.07:416,24,0	0/0:9,0:9:27.05:0,27,532	0/0:14,0:14:39.09:0,39,754	0/0:25,0:25:68.86:0,69,1181	0/0:17,0:17:48.12:0,48,964	0/1:14,5:18:25.69:726,0,26	1/1:2,29:29:35.85:624,36,0	1/1:0,10:10:9.03:170,9,0
chr10	100152075	.	TTC	T	65.65	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=1.493;DP=526;FS=1.291;HRun=0;HaplotypeScore=96.5980;InbreedingCoeff=0.4373;MQ=64.10;MQ0=6;MQRankSum=-1.887;QD=2.19;ReadPosRankSum=-2.201;VQSLOD=1.6536;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,7:11:12.04:149,12,0	0/0:6,0:6:18.06:0,18,295	0/0:22,0:14:1.81:0,2,352	0/0:18,0:11:20.79:0,21,290	0/0:25,0:25:69.22:0,69,1086	0/0:18,0:17:25.49:0,25,128	0/0:13,0:12:30.09:0,30,460	0/0:26,0:25:8.15:0,8,538	0/0:17,0:17:26.11:0,26,186	0/0:25,0:25:69.23:0,69,1097	0/0:15,1:16:1.93:0,2,553	0/0:19,0:19:54.17:0,54,837	0/0:29,1:30:29.02:0,29,988	0/0:23,0:23:63.21:0,63,1010	0/0:25,0:25:63.20:0,63,994	0/0:20,0:20:20.36:0,20,144	0/0:31,0:30:66.18:0,66,1042	0/1:13,0:13:12.99:13,0,170	0/0:8,0:8:17.89:0,18,216	0/0:15,0:15:34.24:0,34,317	0/0:10,0:9:23.56:0,24,175	0/0:8,0:8:21.07:0,21,344	0/0:17,0:17:45.13:0,45,680	0/0:26,0:26:57.19:0,57,913	0/0:15,0:15:36.12:0,36,590	0/0:19,0:18:44.30:0,44,408	0/0:33,0:31:42.83:0,43,324	0/0:11,0:11:11.69:0,12,77
chr10	100152169	.	TCTATC	T	2244.18	PASS	AB=0.735;AC=10;AF=0.192;AN=52;BaseQRankSum=6.242;DP=479;FS=4.765;HRun=0;HaplotypeScore=98.4135;InbreedingCoeff=-0.2490;MQ=48.24;MQ0=32;MQRankSum=0.772;QD=14.39;ReadPosRankSum=0.476;VQSLOD=2.6774;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:32:44.21:0,44,560	0/0:8,0:8:12.04:0,12,217	./.	./.	0/0:23,0:22:51.17:0,51,1271	0/1:6,1:9:65.78:218,0,66	0/0:9,0:7:6.02:0,6,137	0/0:21,0:12:36.12:0,36,525	0/1:6,6:11:99:199,0,152	0/0:28,0:25:75.20:0,75,1212	0/0:13,0:12:21.06:0,21,297	0/0:22,0:21:57.18:0,57,1213	0/0:33,0:33:90.29:0,90,2136	0/0:11,0:9:27.09:0,27,558	0/0:22,0:21:57.19:0,57,970	0/1:3,8:11:33.12:95,0,33	0/0:33,0:26:12.04:0,12,250	0/1:18,0:20:99:311,0,390	0/1:7,1:7:20.89:21,0,246	0/1:6,4:12:99:207,0,182	0/1:14,1:11:71.21:71,0,73	0/0:12,0:11:14.66:0,15,176	0/0:15,0:13:33.11:0,33,816	0/0:24,0:21:50.96:0,51,1163	0/0:10,0:10:18.06:0,18,375	0/1:8,14:19:99:770,0,216	0/1:21,4:27:99:440,0,257	0/1:8,3:8:51.70:52,0,208
chr10	100152174	.	C	CTAT	200.07	PASS	AB=0.948;AC=5;AF=0.096;AN=52;BaseQRankSum=3.245;DP=492;FS=0.000;HRun=0;HaplotypeScore=94.3588;InbreedingCoeff=-0.1182;MQ=47.26;MQ0=35;MQRankSum=0.144;QD=2.02;ReadPosRankSum=1.205;VQSLOD=1.4914;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,14:33:99:176,0,279	0/0:10,0:10:15.52:0,16,230	./.	./.	0/0:23,0:22:51.17:0,51,796	0/0:10,0:9:18.95:0,19,159	0/0:9,0:7:5.51:0,6,91	0/0:23,0:14:39.01:0,39,442	0/0:13,0:12:24.44:0,24,302	0/0:24,0:21:20.73:0,21,684	0/0:11,0:11:18.06:0,18,255	0/0:20,0:19:39.99:0,40,616	0/0:34,0:34:80.76:0,81,1249	0/0:12,0:10:24.08:0,24,373	0/0:22,0:20:52.02:0,52,696	0/1:12,0:12:6.25:6,0,51	0/0:34,0:27:12.76:0,13,189	0/0:24,0:21:2.82:0,3,470	0/0:10,0:7:21.06:0,21,280	0/0:14,0:12:28.61:0,29,359	0/1:14,0:10:32.93:33,0,79	0/1:10,0:9:14.84:15,0,40	0/0:15,0:13:27.09:0,27,432	0/0:28,0:25:30.37:0,30,723	0/0:14,0:14:24.07:0,24,353	0/1:23,0:19:80.84:81,0,243	0/0:29,0:26:34.31:0,34,373	0/0:11,0:8:16.39:0,16,193
chr10	100152219	.	TTATC	T	2908.16	PASS	AB=0.804;AC=31;AF=0.646;AN=48;BaseQRankSum=5.124;DP=487;FS=13.918;HRun=0;HaplotypeScore=93.9696;InbreedingCoeff=0.3513;MQ=44.60;MQ0=49;MQRankSum=-1.197;QD=8.48;ReadPosRankSum=1.645;VQSLOD=1.7018;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,6:25:23.93:360,24,0	1/1:10,1:11:9.01:108,9,0	./.	./.	0/1:13,0:20:18.35:72,0,18	0/1:7,1:14:23.63:189,0,24	0/0:9,0:5:0:0,0,0	0/0:49,0:36:0:0,0,0	1/1:9,4:11:15.05:229,15,0	0/0:19,0:18:30.10:0,30,694	0/0:12,0:12:15.05:0,15,349	1/1:10,8:17:23.59:315,24,0	0/1:21,4:25:99:201,0,249	1/1:7,2:8:3.01:46,3,0	1/1:15,8:23:15.05:229,15,0	1/1:6,3:8:15.03:207,15,0	0/1:24,0:21:1.11:16,0,1	1/1:18,0:22:9:84,9,0	1/1:12,0:6:6.01:70,6,0	0/1:8,0:11:20.35:20,0,44	./.	./.	0/0:8,0:5:0:0,0,0	1/1:16,10:24:15.05:229,15,0	0/0:19,0:19:27.06:0,27,517	1/1:12,4:14:21.07:320,21,0	1/1:20,0:25:9.01:84,9,0	1/1:14,5:13:19.31:277,19,0
chr10	100152382	.	C	CATT	1601.98	PASS	AB=0.846;AC=21;AF=0.477;AN=44;BaseQRankSum=-0.792;DP=246;FS=22.034;HRun=0;HaplotypeScore=35.9431;InbreedingCoeff=0.3905;MQ=71.74;MQ0=6;MQRankSum=-1.509;QD=11.53;ReadPosRankSum=-2.050;VQSLOD=0.8813;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:11,4:15:24.65:141,0,25	0/1:5,0:5:14.24:14,0,70	./.	./.	0/0:12,0:11:6.02:0,6,79	1/1:10,1:14:12.04:175,12,0	0/0:7,0:7:3.01:0,3,40	1/1:37,0:37:12.04:193,12,0	./.	0/0:11,0:11:9.03:0,9,119	0/0:10,0:10:3.01:0,3,40	0/0:2,0:2:3.01:0,3,40	0/0:8,0:8:6.02:0,6,79	0/0:2,0:3:2.98:0,3,21	0/0:8,0:8:6.02:0,6,79	1/1:1,0:2:3.01:39,3,0	0/0:16,0:17:27.05:0,27,338	1/1:4,10:15:24.08:461,24,0	1/1:11,2:12:6.02:115,6,0	1/1:9,1:10:6.02:97,6,0	1/1:5,1:6:3.01:58,3,0	./.	./.	./.	0/0:4,0:4:6.01:0,6,65	1/1:4,3:6:9.03:173,9,0	1/1:6,1:7:6.02:97,6,0	0/1:4,2:6:24.57:192,0,25
chr10	100153350	.	ATTTAG	A	6718.59	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=9.478;DP=443;FS=0.000;HRun=0;HaplotypeScore=90.8798;InbreedingCoeff=0.9713;MQ=84.06;MQ0=2;MQRankSum=-4.790;QD=30.68;ReadPosRankSum=5.834;VQSLOD=4.2111;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,18:23:45.15:854,45,0	0/0:10,0:10:24.08:0,24,579	0/0:15,0:14:21.04:0,21,280	0/0:30,0:26:47.95:0,48,543	0/0:13,0:13:33.11:0,33,879	1/1:5,13:18:33.11:626,33,0	0/0:11,0:11:30.10:0,30,747	1/1:19,14:33:39.13:655,39,0	1/1:3,10:13:18.06:342,18,0	0/0:16,0:16:33.11:0,33,882	0/0:16,0:16:33.11:0,33,877	0/0:6,0:6:15.05:0,15,422	0/0:10,0:10:30.10:0,30,755	0/0:13,0:13:33.11:0,33,816	0/0:11,0:11:24.08:0,24,621	1/1:3,14:16:27.09:513,27,0	0/0:27,0:27:57.20:0,57,1473	1/1:4,17:21:33.11:626,33,0	1/1:6,10:19:8.82:495,9,0	1/1:5,9:14:24.08:376,24,0	1/1:0,5:5:9.03:171,9,0	0/0:5,0:5:15.05:0,15,310	0/0:12,0:12:33.11:0,33,879	0/0:5,0:5:12.04:0,12,281	0/0:20,0:20:39.13:0,39,978	1/1:5,14:19:42.08:694,42,0	1/1:5,21:26:48.16:911,48,0	1/1:1,10:11:24.08:455,24,0
chr10	100154014	.	T	TG	5158.39	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-10.153;DP=651;FS=2.503;HRun=9;HaplotypeScore=71.0820;InbreedingCoeff=0.9809;MQ=71.52;MQ0=0;MQRankSum=-0.339;QD=21.14;ReadPosRankSum=-2.147;VQSLOD=4.8808;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:98.88:0,99,851	0/0:10,0:10:29.87:0,30,250	0/0:15,0:15:16:0,16,175	0/0:13,0:13:13.74:0,14,114	0/0:25,0:25:53.81:0,54,451	1/1:5,14:19:39.11:431,39,0	0/0:26,0:26:71.92:0,72,610	1/1:6,20:26:24.53:434,25,0	1/1:4,9:13:22.72:292,23,0	0/0:27,0:27:68.96:0,69,597	0/0:26,0:26:68.96:0,69,597	0/0:15,0:15:35.93:0,36,302	0/0:16,0:16:38.98:0,39,338	0/0:22,0:22:53.94:0,54,459	0/0:22,0:22:56.96:0,57,491	1/1:8,19:28:66.14:709,66,0	0/0:29,0:29:74.98:0,75,651	1/1:3,16:19:42.11:465,42,0	1/1:6,15:21:24.25:415,24,0	1/1:4,19:23:57.08:603,57,0	1/1:8,20:28:45.12:498,45,0	0/0:32,0:32:74.87:0,75,641	0/0:29,0:29:68.61:0,69,578	0/0:30,0:32:71.02:0,71,605	0/0:23,0:23:62.95:0,63,541	1/1:9,22:31:34.09:576,34,0	1/1:5,15:20:6.74:305,7,0	1/1:2,14:16:39.11:431,39,0
chr10	100156017	.	ATGGAGGAAACTGT	A	19547.98	PASS	AB=0.567;AC=23;AF=0.411;AN=56;BaseQRankSum=18.079;DP=668;FS=1.059;HRun=0;HaplotypeScore=263.1335;InbreedingCoeff=0.8775;MQ=91.06;MQ0=0;MQRankSum=-16.872;QD=77.57;ReadPosRankSum=4.499;VQSLOD=4.4612;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,16:20:5.07:1316,5,0	0/0:18,0:18:54.16:0,54,3012	0/0:30,0:30:81.26:0,81,3694	0/0:33,0:33:90.19:0,90,4908	0/0:28,0:28:84.29:0,84,5432	1/1:3,24:27:57.20:2328,57,0	0/0:25,0:25:75.24:0,75,4836	1/1:5,15:20:45.14:1743,45,0	1/1:4,18:22:39.13:1592,39,0	0/0:33,0:33:96.32:0,96,5952	0/0:31,0:31:93.32:0,93,6006	0/0:27,0:27:81.28:0,81,5217	0/0:27,0:27:81.28:0,81,5225	0/0:23,0:23:69.23:0,69,4434	0/0:28,0:28:84.29:0,84,5440	1/1:4,18:22:48.16:1961,48,0	0/0:21,0:21:63.20:0,63,4024	1/1:4,7:11:12.04:490,12,0	1/1:6,15:21:43.02:1545,43,0	1/1:6,20:26:54.14:1945,54,0	1/1:2,8:10:18.06:671,18,0	0/0:18,0:18:54.18:0,54,3342	0/0:34,0:34:99:0,99,6311	0/0:20,0:20:60.21:0,60,3442	0/0:20,0:20:60.21:0,60,4004	0/1:8,26:34:92.55:3017,0,93	1/1:3,26:29:69.24:2817,69,0	1/1:0,10:10:3.01:123,3,0
chr10	100156842	.	AT	A	2464.16	PASS	AB=0.610;AC=21;AF=0.375;AN=56;BaseQRankSum=5.286;DP=591;FS=6.680;HRun=12;HaplotypeScore=61.4403;InbreedingCoeff=0.8586;MQ=66.70;MQ0=13;MQRankSum=1.114;QD=11.68;ReadPosRankSum=1.044;VQSLOD=3.1799;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:31:37.26:0,37,218	0/0:3,0:3:9.02:0,9,91	0/0:73,0:18:9.38:0,9,125	0/0:64,1:18:26.31:0,26,194	0/0:35,0:35:84.48:0,84,809	1/1:9,18:27:32.80:253,33,0	0/0:9,0:9:21.04:0,21,213	1/1:5,24:30:64.84:565,65,0	1/1:2,12:14:11.89:88,12,0	0/0:28,0:28:59.34:0,59,539	0/0:19,0:19:42.05:0,42,409	0/0:6,0:6:14.90:0,15,125	0/0:12,0:12:27.03:0,27,261	0/0:14,0:14:32.94:0,33,308	0/0:12,0:12:27.03:0,27,262	1/1:3,13:16:11.15:190,11,0	0/0:22,0:22:51.03:0,51,516	1/1:12,12:23:47.80:371,48,0	0/1:9,16:23:8.54:292,0,9	1/1:8,12:20:7.75:222,8,0	1/1:1,0:3:4.53:15,5,0	0/0:4,0:5:11.85:0,12,99	0/0:15,0:14:36.05:0,36,358	0/0:16,0:16:45.08:0,45,451	0/0:15,0:15:41.88:0,42,390	1/1:7,16:23:46.74:347,47,0	1/1:4,18:22:35.64:268,36,0	1/1:3,3:6:8.86:62,9,0
chr10	100160148	.	CA	C	9956.74	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=14.059;DP=667;FS=7.657;HRun=2;HaplotypeScore=63.8933;InbreedingCoeff=0.9988;MQ=82.66;MQ0=0;MQRankSum=-2.872;QD=36.34;ReadPosRankSum=2.564;VQSLOD=5.4324;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:63.20:817,63,0	0/0:16,0:16:48.14:0,48,679	0/0:30,0:30:90.15:0,90,1281	0/0:17,0:17:51.11:0,51,697	0/0:32,0:32:90.29:0,90,1329	1/1:1,28:29:81.26:1052,81,0	0/0:11,0:11:33.11:0,33,494	1/1:2,32:34:96.29:1218,96,0	1/1:0,17:17:45.15:584,45,0	0/0:32,0:32:93.28:0,93,1370	0/0:33,0:33:99:0,99,1441	0/0:25,0:25:75.23:0,75,1075	0/0:25,0:25:75.22:0,75,1075	0/0:28,0:28:81.27:0,81,1212	0/0:23,0:23:69.23:0,69,1033	1/1:0,25:25:66.21:857,66,0	0/0:21,0:21:63.21:0,63,941	1/1:0,6:6:18.06:233,18,0	1/1:1,16:17:48.16:623,48,0	1/1:0,32:32:96.20:1203,96,0	1/1:0,20:20:57.19:740,57,0	0/0:30,0:30:87.29:0,87,1282	0/0:29,0:29:84.28:0,84,1259	0/0:18,0:18:54.18:0,54,808	0/0:23,0:23:69.23:0,69,1034	1/1:0,28:28:84.24:1072,84,0	1/1:0,29:29:78.25:1012,78,0	1/1:0,14:14:42.14:545,42,0
chr10	100162219	.	AT	A	8557.76	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=14.730;DP=748;FS=1.231;HRun=7;HaplotypeScore=72.0046;InbreedingCoeff=0.9988;MQ=86.18;MQ0=0;MQRankSum=-1.952;QD=27.52;ReadPosRankSum=1.518;VQSLOD=5.6176;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,46:50:99:1316,129,0	0/0:11,0:11:33.11:0,33,415	0/0:30,0:30:57.14:0,57,748	0/0:21,0:21:51.12:0,51,614	0/0:23,0:23:66.18:0,66,805	1/1:1,21:22:63.14:643,63,0	0/0:20,0:20:54.17:0,54,679	1/1:2,34:36:99:1040,102,0	1/1:2,16:18:48.11:490,48,0	0/0:42,0:42:99:0,111,1367	0/0:27,0:27:78.24:0,78,968	0/0:26,0:26:69.22:0,69,868	0/0:21,0:21:60.17:0,60,727	0/0:24,0:24:69.22:0,69,868	0/0:37,0:37:99:0,102,1271	1/1:1,25:26:72.16:735,72,0	0/0:31,0:31:87.28:0,87,1093	1/1:1,20:21:54.12:551,54,0	1/1:3,17:20:54.11:546,54,0	1/1:1,23:24:66.15:673,66,0	1/1:4,33:37:93.21:949,93,0	0/0:29,0:29:81.26:0,81,1016	0/0:21,0:21:63.20:0,63,793	0/0:36,0:36:87.20:0,87,1044	0/0:38,0:38:99:0,105,1310	1/1:1,28:29:49.46:819,49,0	1/1:0,20:20:60.14:612,60,0	1/1:1,7:8:18.04:184,18,0
chr10	100163743	.	T	TC	39.59	PASS	AB=0.822;AC=5;AF=0.109;AN=46;BaseQRankSum=2.334;DP=95;FS=9.641;HRun=0;HaplotypeScore=22.7527;InbreedingCoeff=0.0120;MQ=55.51;MQ0=1;MQRankSum=-0.450;QD=1.98;ReadPosRankSum=-2.143;VQSLOD=-0.5986;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:2:6.02:0,6,81	0/0:3,0:3:9.02:0,9,110	0/0:7,0:3:8.99:0,9,103	0/1:10,0:4:9.04:9,0,75	0/0:9,0:9:23.77:0,24,180	0/0:3,1:2:6.02:0,6,82	0/0:3,0:3:8.94:0,9,72	0/1:3,1:3:38.83:39,0,61	./.	0/0:4,0:4:12.04:0,12,167	0/0:1,0:1:2.99:0,3,23	0/0:2,0:2:5.98:0,6,62	0/0:1,0:1:2.97:0,3,20	./.	0/0:3,0:3:8.93:0,9,65	0/0:1,0:1:3.01:0,3,41	0/1:2,2:3:46.84:47,0,75	1/1:0,2:2:3.01:47,3,0	0/0:5,0:4:11.92:0,12,119	./.	./.	0/0:6,0:6:14.88:0,15,111	0/0:5,0:5:14.88:0,15,121	0/0:6,3:9:2.29:0,2,19	0/0:2,0:2:5.93:0,6,40	0/0:3,0:3:9.02:0,9,104	./.	0/0:2,0:2:6.02:0,6,66
chr10	100163835	.	TCTCCTC	T	1242.93	PASS	AB=1.000;AC=17;AF=0.327;AN=52;BaseQRankSum=1.650;DP=334;FS=13.350;HRun=0;HaplotypeScore=52.7525;InbreedingCoeff=0.5823;MQ=33.41;MQ0=33;MQRankSum=-1.937;QD=13.97;ReadPosRankSum=-3.822;VQSLOD=-0.2571;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:8:0.35:167,0,0	0/0:4,0:4:12.04:0,12,174	0/0:28,0:4:12.04:0,12,199	0/0:19,0:1:3.01:0,3,62	0/0:19,0:15:30.10:0,30,503	1/1:8,0:5:9.03:132,9,0	0/0:8,0:6:18.05:0,18,293	1/1:4,8:8:20.90:265,21,0	0/1:3,0:3:16.05:44,0,16	0/0:12,0:9:27.09:0,27,411	0/0:11,0:9:24.08:0,24,353	0/0:7,0:6:15.04:0,15,240	0/0:9,0:8:21.07:0,21,394	0/0:9,0:8:21:0,21,283	0/0:12,0:11:28.08:0,28,409	0/1:12,0:8:16.07:196,0,16	0/0:17,0:15:39.07:0,39,540	0/1:9,0:6:30.40:108,0,30	./.	./.	1/1:8,0:4:3.01:36,3,0	0/0:19,0:13:30.86:0,31,513	0/0:21,0:15:36.03:0,36,543	0/0:27,0:23:28.65:0,29,600	0/0:18,0:17:35.49:0,35,606	1/1:11,0:7:20.97:281,21,0	1/1:7,0:6:12.03:150,12,0	1/1:6,0:4:5.74:39,6,0
chr10	100164132	.	AC	A	996.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.755;DP=773;FS=7.959;HRun=1;HaplotypeScore=78.0108;InbreedingCoeff=0.9996;MQ=75.27;MQ0=0;MQRankSum=-3.388;QD=32.13;ReadPosRankSum=0.641;VQSLOD=2.7254;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:78.26:1091,78,0	0/0:14,0:14:39.13:0,39,623	0/0:23,0:23:69.01:0,69,995	0/0:22,0:22:63.04:0,63,993	0/0:27,0:27:69.24:0,69,1102	0/0:17,0:17:51.17:0,51,815	0/0:30,0:30:90.29:0,90,1416	0/0:30,0:30:87.26:0,87,1303	0/0:23,0:23:69.24:0,69,1100	0/0:41,0:37:99:0,111,1756	0/0:18,0:17:42.13:0,42,645	0/0:35,0:35:99:0,105,1654	0/0:38,0:38:99:0,114,1822	0/0:30,0:30:90.27:0,90,1390	0/0:38,0:38:99:0,114,1822	0/0:38,0:38:99:0,114,1820	0/0:31,0:31:93.29:0,93,1457	0/0:15,0:15:45.13:0,45,693	0/0:24,0:24:72.21:0,72,1083	0/0:20,0:20:57.18:0,57,888	0/0:36,0:36:99:0,105,1679	0/0:24,0:24:66.23:0,66,1054	0/0:32,0:31:81.28:0,81,1294	0/0:25,0:25:75.22:0,75,1150	0/0:30,0:30:78.27:0,78,1246	0/0:33,0:33:96.33:0,96,1535	0/0:37,0:36:99:0,105,1655	0/0:11,0:11:33.11:0,33,528
chr10	100164467	.	CGT	C	7080.31	PASS	AB=0.835;AC=23;AF=0.411;AN=56;BaseQRankSum=14.460;DP=823;FS=3.625;HRun=0;HaplotypeScore=102.9647;InbreedingCoeff=0.8299;MQ=65.40;MQ0=3;MQRankSum=0.081;QD=18.73;ReadPosRankSum=3.340;VQSLOD=5.0944;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:38.93:0,39,879	0/0:10,0:10:24.08:0,24,382	0/1:35,0:23:0.63:1,0,300	0/0:40,0:36:56.28:0,56,691	0/0:33,0:33:44.61:0,45,1225	1/1:6,22:28:51.16:623,51,0	0/0:31,0:31:72.21:0,72,1094	1/1:15,15:30:45.13:537,45,0	1/1:12,22:34:42.13:513,42,0	0/0:38,1:39:47.61:0,48,1217	0/0:17,0:17:39.11:0,39,585	0/0:32,0:32:75.24:0,75,1181	0/0:29,2:31:32.55:0,33,983	0/0:29,0:29:69.13:0,69,1066	0/0:34,0:34:15.44:0,15,830	1/1:5,29:34:78.24:952,78,0	0/0:32,0:32:42.39:0,42,1159	1/1:1,18:19:36.11:440,36,0	1/1:12,18:30:54.15:632,54,0	1/1:4,31:36:81.08:967,81,0	1/1:7,30:37:66.21:806,66,0	0/0:37,2:39:56.66:0,57,1382	0/0:30,1:31:38.58:0,39,1076	0/1:30,2:32:4.09:4,0,937	0/0:20,0:20:42.12:0,42,622	0/1:6,20:27:21.46:675,0,21	1/1:2,17:21:41.96:491,42,0	1/1:0,14:14:36.11:440,36,0
chr10	100165715	.	GTCAATTCT	G	14611.75	PASS	AB=0.511;AC=21;AF=0.375;AN=56;BaseQRankSum=18.488;DP=718;FS=9.355;HRun=0;HaplotypeScore=184.9161;InbreedingCoeff=0.9040;MQ=85.82;MQ0=0;MQRankSum=-16.175;QD=59.16;ReadPosRankSum=0.699;VQSLOD=4.0232;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,4785	0/0:12,0:12:36.11:0,36,1500	0/0:27,0:27:78.26:0,78,2902	0/0:33,0:33:95.88:0,96,3665	0/0:26,0:26:78.27:0,78,3389	1/1:0,28:28:60.21:1683,60,0	0/0:25,0:25:75.23:0,75,3035	1/1:4,35:39:99:2471,105,0	1/1:0,34:34:72.25:2047,72,0	0/0:33,0:33:96.26:0,96,3832	0/0:27,0:27:81.27:0,81,3492	0/0:26,0:26:78.25:0,78,3213	0/0:24,0:24:66.19:0,66,2566	0/0:21,0:21:63.21:0,63,2702	0/0:26,0:26:78.27:0,78,3369	1/1:0,32:32:66.19:1863,66,0	0/0:39,0:39:99:0,117,4796	1/1:0,5:5:9.03:254,9,0	1/1:1,10:11:30.09:670,30,0	1/1:0,25:25:51.17:1386,51,0	1/1:0,13:13:15.05:430,15,0	0/0:28,0:28:81.28:0,81,3378	0/0:23,0:23:66.23:0,66,2784	0/0:46,0:46:99:0,129,5600	0/0:18,0:18:54.19:0,54,2385	0/1:1,23:24:61.98:1658,0,62	1/1:1,27:28:66.23:1892,66,0	1/1:0,8:8:9.03:258,9,0
chr10	100166378	.	TTTTC	T	1732.51	PASS	AB=0.899;AC=17;AF=0.354;AN=48;BaseQRankSum=0.797;DP=609;FS=0.000;HRun=0;HaplotypeScore=115.6278;InbreedingCoeff=0.4900;MQ=67.21;MQ0=1;MQRankSum=2.025;QD=6.54;ReadPosRankSum=-1.133;VQSLOD=2.2465;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:20.91:0,21,254	./.	./.	./.	0/0:33,0:33:17.59:0,18,953	1/1:31,0:30:20.59:170,21,0	1/1:17,0:17:11.97:101,12,0	./.	0/0:25,0:24:21.05:0,21,308	1/1:23,12:36:38.72:436,39,0	1/1:12,15:27:36.04:518,36,0	1/1:10,7:17:8.95:137,9,0	0/1:30,1:31:12.46:12,0,484	0/0:17,0:17:6.02:0,6,139	1/1:16,8:25:18.05:256,18,0	0/0:21,0:21:27.05:0,27,379	0/1:17,2:19:6.34:160,0,6	0/0:8,0:7:8.95:0,9,69	0/0:22,0:21:12.03:0,12,160	0/0:27,0:27:17.98:0,18,206	0/1:23,0:23:12.32:12,0,75	0/0:21,0:21:6.84:0,7,442	0/1:17,1:19:73.35:73,0,301	0/0:18,0:18:30:0,30,406	0/1:12,8:20:33.47:33,0,195	0/0:33,0:33:32.75:0,33,426	0/0:25,0:25:36.09:0,36,554	0/0:12,0:12:6:0,6,64
chr10	100166432	.	TTCTTCCTTCCTTCCTTCCTCTCTTTCTTTCTC	T	4460.79	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=10.989;DP=554;FS=2.500;HRun=0;HaplotypeScore=374.4033;InbreedingCoeff=0.2667;MQ=49.54;MQ0=29;MQRankSum=-7.801;QD=17.63;ReadPosRankSum=-0.493;VQSLOD=2.3700;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:13:20.23:226,20,0	0/0:2,0:2:6.02:0,6,307	0/1:9,0:2:7.44:7,0,82	0/0:15,0:5:6.74:0,7,325	0/0:36,0:35:96.22:0,96,4420	0/1:21,0:17:21.08:243,0,21	0/0:19,0:19:54.12:0,54,2295	1/1:32,0:21:28.54:242,29,0	1/1:15,0:13:20.99:436,21,0	0/0:31,0:30:84.24:0,84,4727	0/0:27,0:27:72.11:0,72,2785	0/0:17,0:17:36.12:0,36,2229	0/0:24,0:24:66.20:0,66,3353	0/0:13,0:13:39.13:0,39,1902	0/0:26,0:26:66.23:0,66,3694	0/1:13,0:13:49.82:202,0,50	0/1:19,0:18:66.76:67,0,1130	0/1:16,0:12:38.55:496,0,39	1/1:17,9:22:27.40:474,27,0	1/1:3,23:26:17.98:228,18,0	0/1:6,0:5:42.59:43,0,111	0/0:24,0:23:60.18:0,60,3054	0/0:19,0:19:54.17:0,54,2862	0/0:26,0:21:54.05:0,54,2349	0/0:22,0:21:42.14:0,42,2636	0/1:28,0:28:99:803,0,99	0/1:21,0:20:91.56:840,0,92	0/1:5,0:3:80.60:154,0,81
chr10	100166436	.	TCCTTCCTTCCTTCCTCTCTTTCTTTCTC	T	4752.51	PASS	AB=0.943;AC=18;AF=0.321;AN=56;BaseQRankSum=10.997;DP=555;FS=3.771;HRun=0;HaplotypeScore=334.9314;InbreedingCoeff=0.3133;MQ=49.09;MQ0=25;MQRankSum=-8.834;QD=20.57;ReadPosRankSum=-0.839;VQSLOD=2.9029;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:12:19.09:319,19,0	0/0:4,0:4:12.04:0,12,569	0/0:12,0:3:5.14:0,5,223	0/0:20,0:7:10.73:0,11,566	0/0:35,0:34:99:0,102,4942	0/1:17,0:13:50.86:180,0,51	0/0:19,0:19:57.19:0,57,2494	1/1:29,0:21:28.97:245,29,0	1/1:16,0:14:27.08:721,27,0	0/0:32,0:32:90.27:0,90,5165	0/0:29,0:29:78.26:0,78,3317	0/0:18,0:18:39.13:0,39,2359	0/0:23,0:23:69.23:0,69,3618	0/0:15,0:15:45.15:0,45,2148	0/0:28,0:28:72.25:0,72,4024	0/1:12,0:12:99:112,0,102	0/1:19,0:18:85.75:86,0,1183	0/1:14,0:10:39.79:525,0,40	1/1:23,0:20:27.40:435,27,0	1/1:24,0:24:11.20:151,11,0	0/1:5,0:4:23.65:24,0,136	0/0:22,0:21:63.19:0,63,3276	0/0:19,0:19:57.20:0,57,3076	0/0:26,0:21:60.09:0,60,2696	0/0:22,0:21:42.14:0,42,2559	0/1:4,23:27:96.25:976,0,96	0/1:24,0:22:89.37:673,0,89	0/1:6,0:4:59.54:307,0,60
chr10	100166451	.	TC	T	1188.81	PASS	AB=0.869;AC=15;AF=0.268;AN=56;BaseQRankSum=11.044;DP=541;FS=5.016;HRun=2;HaplotypeScore=99.0900;InbreedingCoeff=0.3244;MQ=49.17;MQ0=23;MQRankSum=-6.422;QD=7.43;ReadPosRankSum=-2.996;VQSLOD=-0.1205;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:8,4:10:14.86:15,0,51	0/0:5,0:5:15.05:0,15,238	0/0:19,0:5:12.88:0,13,154	0/0:30,0:9:18.01:0,18,288	0/0:30,0:29:87.30:0,87,1382	1/1:8,11:15:20.52:205,21,0	0/0:19,0:19:57.18:0,57,887	0/0:9,0:8:2.88:0,3,238	1/1:10,4:12:15.82:213,16,0	0/0:30,0:30:90.30:0,90,1417	0/0:26,0:26:73.06:0,73,1024	0/0:18,0:18:42.14:0,42,652	0/0:28,0:28:84.27:0,84,1306	0/0:17,0:17:51.16:0,51,791	0/0:31,0:31:84.29:0,84,1330	1/1:7,3:10:16.06:201,16,0	0/0:21,0:20:18.33:0,18,591	0/1:11,2:9:87.92:93,0,88	0/1:11,0:10:31.07:121,0,31	0/1:24,0:24:15.26:69,0,15	0/1:2,1:2:6.78:13,0,7	0/0:24,0:23:69.22:0,69,1075	0/0:29,0:29:87.30:0,87,1363	0/0:25,0:20:57.12:0,57,833	0/0:20,0:19:48.16:0,48,757	0/1:25,0:25:25.72:228,0,26	1/1:17,7:22:3.53:155,4,0	0/1:3,2:3:13.25:49,0,13
chr10	100166455	.	T	TTTCTTTCTTTCC	1704.14	PASS	AB=0.956;AC=15;AF=0.268;AN=56;BaseQRankSum=9.134;DP=554;FS=11.072;HRun=0;HaplotypeScore=207.7745;InbreedingCoeff=0.2766;MQ=48.59;MQ0=23;MQRankSum=-9.280;QD=9.42;ReadPosRankSum=-2.959;VQSLOD=1.0669;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:10:1.58:19,2,0	0/0:5,0:5:15.05:0,15,487	0/0:19,0:5:8.63:0,9,214	0/0:30,0:9:17.93:0,18,558	0/0:30,0:29:75.24:0,75,2302	1/1:17,2:15:12.46:284,12,0	0/0:20,0:20:57.17:0,57,1639	1/1:15,0:14:17.49:248,17,0	0/1:16,0:14:26.15:98,0,26	0/0:31,0:31:87.28:0,87,2621	0/0:24,0:24:45.14:0,45,1476	0/0:18,0:18:36.12:0,36,1218	0/0:25,0:25:72.25:0,72,2275	0/0:17,0:17:48.13:0,48,1623	0/0:30,0:30:78.27:0,78,2642	0/1:11,0:11:18.41:18,0,27	0/0:23,0:22:21.84:0,22,1069	0/1:14,1:11:5.86:260,0,6	0/1:11,1:11:89.78:191,0,90	1/1:24,0:24:5.38:107,5,0	0/0:3,0:2:3:0,3,29	0/0:25,0:24:57.18:0,57,1783	0/0:28,0:28:81.28:0,81,2320	0/0:27,0:22:57.20:0,57,1756	0/0:18,0:17:42.14:0,42,1369	0/1:24,1:25:99:397,0,215	0/1:22,4:24:99:171,0,174	0/1:6,0:4:14.62:79,0,15
chr10	100167385	.	GTA	G	1914.88	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=0.504;DP=463;FS=23.716;HRun=0;HaplotypeScore=86.9028;InbreedingCoeff=0.8327;MQ=74.01;MQ0=11;MQRankSum=-3.641;QD=9.34;ReadPosRankSum=0.681;VQSLOD=1.6403;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:21:26.94:223,27,0	0/0:7,0:7:14.91:0,15,113	0/0:20,0:16:47.74:0,48,482	0/0:36,0:32:74.08:0,74,740	0/0:11,0:11:33:0,33,393	1/1:8,0:8:11.98:99,12,0	1/1:24,1:24:16.79:217,17,0	1/1:16,0:15:42.20:336,42,0	1/1:11,1:12:14.37:92,14,0	0/0:17,0:17:42.16:0,42,441	0/0:5,0:4:12.01:0,12,139	0/0:16,0:16:36.03:0,36,483	0/0:14,0:14:32.54:0,33,341	0/0:17,0:17:34.54:0,35,459	0/0:13,0:13:32.42:0,32,250	1/1:10,1:10:14.91:117,15,0	0/0:24,0:23:38.14:0,38,647	1/1:13,0:12:25.50:173,26,0	0/1:6,0:5:23.39:34,0,23	1/1:8,1:9:3.06:63,3,0	1/1:50,0:47:35.94:412,36,0	0/0:16,0:15:33.72:0,34,334	0/0:7,0:6:18:0,18,211	0/0:40,0:39:66.75:0,67,879	0/0:15,0:15:33.90:0,34,333	1/1:20,0:15:8.40:207,8,0	1/1:6,0:6:9.41:80,9,0	1/1:5,0:5:0.42:77,0,0
chr10	100167388	.	TAC	T	130.84	PASS	AB=0.955;AC=15;AF=0.313;AN=48;BaseQRankSum=-0.644;DP=501;FS=0.000;HRun=0;HaplotypeScore=98.3344;InbreedingCoeff=0.0062;MQ=66.16;MQ0=15;MQRankSum=2.936;QD=0.59;ReadPosRankSum=-0.927;VQSLOD=1.6356;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:22:2.50:9,2,0	1/1:7,0:8:2.04:6,2,0	./.	./.	0/0:12,0:12:15.05:0,15,212	./.	0/0:24,0:22:2.89:0,3,36	0/0:22,0:19:2.90:0,3,16	1/1:11,0:11:1.55:4,2,0	0/1:15,1:16:17.75:18,0,88	0/0:8,0:7:0.83:0,1,52	0/1:17,0:17:2.34:2,0,237	0/1:18,0:18:20.36:20,0,105	0/1:18,0:18:27.95:28,0,186	1/1:13,1:14:9.26:44,9,0	./.	0/1:26,3:28:85.07:85,0,332	0/0:11,0:10:5.55:0,6,30	0/0:6,0:5:6.02:0,6,75	0/0:9,0:9:2.99:0,3,24	0/0:54,0:49:11.87:0,12,106	0/1:15,3:17:19.89:26,0,20	0/0:9,0:8:8.70:0,9,99	0/1:47,1:46:19.04:19,0,407	0/0:20,0:20:12.02:0,12,155	0/0:22,0:16:7.69:0,8,45	0/0:6,0:6:2.98:0,3,21	0/0:7,0:7:8.96:0,9,80
chr10	100167431	.	ACACG	A	1164.27	PASS	AB=1.000;AC=24;AF=0.444;AN=54;BaseQRankSum=8.098;DP=561;FS=10.608;HRun=0;HaplotypeScore=116.8640;InbreedingCoeff=0.4396;MQ=42.99;MQ0=38;MQRankSum=-5.213;QD=3.79;ReadPosRankSum=-4.688;VQSLOD=-0.3814;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:22:21.77:22,0,36	0/1:6,0:6:20.22:20,0,54	./.	0/0:9,0:1:2.88:0,3,15	0/0:16,0:16:36.90:0,37,552	1/1:12,0:12:5.42:47,5,0	1/1:22,0:19:3.46:25,3,0	0/1:23,0:15:11.06:137,0,11	1/1:14,0:14:8.92:63,9,0	0/0:30,0:28:67.25:0,67,513	0/0:9,0:9:17.71:0,18,207	0/0:24,0:23:30.99:0,31,355	0/0:20,0:20:41.43:0,41,438	0/0:18,0:18:22.21:0,22,409	0/1:18,0:18:26.65:27,0,195	1/1:17,0:14:17.90:145,18,0	0/0:31,0:30:63.80:0,64,940	1/1:15,0:12:11.55:153,12,0	0/1:17,0:14:72.53:73,0,73	1/1:25,0:24:8.89:65,9,0	1/1:57,3:45:21.42:188,21,0	0/0:11,0:10:9.02:0,9,122	0/0:12,0:9:20.98:0,21,309	0/0:54,0:49:58.52:0,59,1137	0/0:18,0:18:29.89:0,30,413	1/1:27,1:22:28.59:287,29,0	1/1:6,0:6:5.93:40,6,0	0/1:17,0:14:41.46:65,0,41
chr10	100167433	.	ACGCACG	A	381.79	PASS	AB=0.974;AC=17;AF=0.315;AN=54;BaseQRankSum=6.661;DP=545;FS=8.275;HRun=0;HaplotypeScore=129.3209;InbreedingCoeff=0.0962;MQ=42.56;MQ0=36;MQRankSum=-5.681;QD=1.44;ReadPosRankSum=-3.871;VQSLOD=0.4271;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:22:41.29:41,0,64	0/1:6,0:6:0.16:0,0,110	./.	0/0:10,0:1:3.01:0,3,32	0/0:16,0:16:39.13:0,39,1018	0/0:12,0:12:0.55:0,1,2	0/0:20,0:17:2.80:0,3,18	0/1:23,0:15:0.20:0,0,73	1/1:14,0:14:6.55:47,7,0	0/0:26,0:24:64.65:0,65,928	0/0:9,0:9:17.89:0,18,350	0/0:24,0:23:34.80:0,35,736	0/0:18,0:18:39.98:0,40,802	0/1:18,0:18:1.37:1,0,722	0/0:18,0:18:2.64:0,3,621	1/1:15,0:13:1.61:4,2,0	0/0:31,0:30:79.23:0,79,1697	0/1:14,0:11:17.23:61,0,17	0/1:11,5:13:96.28:96,0,148	1/1:21,0:21:1.71:5,2,0	0/1:58,0:43:8.11:8,0,52	0/0:10,0:9:9.03:0,9,256	0/0:12,0:9:21.03:0,21,511	0/0:51,0:46:63.98:0,64,1967	0/0:17,0:18:29.74:0,30,700	1/1:30,0:24:3.28:198,3,0	0/1:7,0:7:11.03:11,0,14	0/1:17,0:14:42.75:43,0,93
chr10	100167449	.	ATG	A	388.35	PASS	AB=0.980;AC=12;AF=0.214;AN=56;BaseQRankSum=6.575;DP=535;FS=12.132;HRun=0;HaplotypeScore=94.6166;InbreedingCoeff=-0.0845;MQ=43.87;MQ0=31;MQRankSum=-2.324;QD=2.17;ReadPosRankSum=-3.031;VQSLOD=0.3669;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,1:21:32.36:32,0,48	0/1:6,0:6:22.75:23,0,229	0/0:12,0:2:6.02:0,6,99	0/0:19,0:3:8.95:0,9,103	0/0:16,0:16:42.13:0,42,798	0/0:14,1:15:3.38:0,3,10	0/1:20,1:19:29.87:30,0,51	0/0:24,0:17:20.48:0,20,338	0/1:11,0:11:1.63:2,0,25	0/0:23,0:21:33.58:0,34,898	0/1:10,0:10:13.75:14,0,273	0/0:19,0:18:9.31:0,9,624	0/0:18,0:18:13.22:0,13,769	0/1:20,0:20:31.84:32,0,723	0/0:18,0:18:45.15:0,45,890	0/0:16,1:14:6.48:0,6,38	0/0:31,0:30:72.69:0,73,1377	0/1:11,1:10:29.26:34,0,29	0/0:16,0:14:26.73:0,27,301	1/1:22,3:24:7.54:128,8,0	0/0:44,1:34:2:0,2,3	0/0:11,1:11:18.04:0,18,301	0/0:12,0:10:14.80:0,15,437	0/0:43,1:41:95.43:0,95,1766	0/0:15,0:15:31.60:0,32,600	0/1:27,1:26:99:144,0,206	0/1:6,0:6:16.38:16,0,36	0/1:15,0:12:45.33:79,0,45
chr10	100167451	.	G	GCA	2404.52	PASS	AB=0.800;AC=21;AF=0.375;AN=56;BaseQRankSum=10.170;DP=559;FS=25.666;HRun=0;HaplotypeScore=97.7265;InbreedingCoeff=0.6594;MQ=43.53;MQ0=30;MQRankSum=-1.674;QD=9.11;ReadPosRankSum=-0.103;VQSLOD=1.1628;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,1:21:6:53,6,0	0/0:6,0:6:12.04:0,12,148	0/0:15,0:2:6.02:0,6,74	0/0:19,0:3:9.02:0,9,94	0/0:17,0:17:37.93:0,38,447	1/1:11,6:17:5.95:97,6,0	1/1:10,14:22:15.05:243,15,0	0/1:22,3:18:73.74:358,0,74	1/1:8,3:11:3.01:49,3,0	0/0:23,0:22:41.50:0,41,438	0/0:10,0:11:11.87:0,12,125	0/0:18,0:18:30.09:0,30,368	0/0:19,0:19:34.36:0,34,440	0/0:20,0:20:36.11:0,36,443	0/0:18,0:18:45.13:0,45,541	1/1:14,5:17:15.03:242,15,0	0/0:29,0:28:66.17:0,66,796	1/1:7,6:11:19.86:270,20,0	0/0:16,0:14:6:0,6,62	1/1:16,7:23:11.59:158,12,0	1/1:29,20:39:17.51:290,18,0	0/0:13,0:12:18.06:0,18,220	0/0:11,0:10:15.05:0,15,185	0/0:42,0:41:71.48:0,71,953	0/0:14,0:15:32.74:0,33,354	0/1:15,14:27:81.77:433,0,82	0/1:8,2:10:8.07:171,0,8	1/1:10,4:12:15.64:240,16,0
chr10	100167511	.	GCA	G	513.17	PASS	AB=0.932;AC=11;AF=0.196;AN=56;BaseQRankSum=6.754;DP=491;FS=39.748;HRun=0;HaplotypeScore=97.1850;InbreedingCoeff=0.2124;MQ=44.63;MQ0=20;MQRankSum=-6.241;QD=4.71;ReadPosRankSum=0.924;VQSLOD=1.1141;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:8.55:0,9,84	0/0:11,0:11:22.32:0,22,337	0/0:29,0:5:5.95:0,6,68	0/0:37,0:4:3:0,3,50	0/0:9,0:9:18.04:0,18,269	0/0:8,3:11:0.44:0,0,1	0/0:23,2:24:0.19:0,0,3	1/1:12,3:11:14.98:161,15,0	0/1:9,0:7:5.51:32,0,6	0/0:25,0:23:60.20:0,60,976	0/0:14,0:14:28.91:0,29,438	0/0:16,0:16:38.95:0,39,594	0/0:20,1:21:12.16:0,12,687	0/0:24,0:24:51.14:0,51,775	0/0:16,0:16:36.09:0,36,535	0/1:17,0:16:11.33:31,0,11	0/0:15,0:15:42.12:0,42,620	0/1:4,2:6:45.37:64,0,45	1/1:6,0:5:3.01:38,3,0	0/1:6,0:5:0.05:0,0,0	0/0:31,0:24:2.76:0,3,32	0/0:8,0:8:21.06:0,21,326	0/0:15,0:15:36.12:0,36,581	0/0:39,0:39:87.30:0,87,1419	0/0:19,0:19:45.15:0,45,736	0/1:20,1:20:59.32:59,0,118	0/1:14,2:15:14.62:214,0,15	0/1:12,1:13:47.28:56,0,47
chr10	100167521	.	A	ACG	776.95	PASS	AB=0.950;AC=17;AF=0.304;AN=56;BaseQRankSum=8.260;DP=436;FS=17.158;HRun=0;HaplotypeScore=96.4547;InbreedingCoeff=0.4529;MQ=46.55;MQ0=19;MQRankSum=-9.107;QD=6.32;ReadPosRankSum=-4.367;VQSLOD=0.7307;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:12:11.97:0,12,147	0/0:11,0:11:13.75:0,14,306	0/0:20,0:2:5.95:0,6,64	0/0:32,0:3:3.01:0,3,46	0/0:9,0:9:24.03:0,24,299	1/1:5,4:9:1.24:4,1,0	1/1:14,8:21:8:30,8,0	1/1:12,0:10:20.88:212,21,0	1/1:4,2:5:5.05:53,5,0	0/0:25,0:23:63.19:0,63,938	0/0:12,0:12:29.59:0,30,416	0/0:16,0:16:37.39:0,37,549	0/0:19,0:19:53.95:0,54,765	0/0:20,0:20:54.14:0,54,754	0/0:14,0:14:36.09:0,36,505	0/1:12,2:13:14.01:41,0,14	0/0:17,0:17:48.09:0,48,641	0/1:4,0:4:39.13:64,0,39	1/1:5,1:3:5.97:68,6,0	0/1:5,0:4:0.13:0,0,0	0/0:20,1:17:2.42:0,2,22	0/0:9,0:9:24.05:0,24,323	0/0:16,0:16:39.12:0,39,569	0/0:39,0:39:99:0,99,1415	0/0:19,0:19:45.15:0,45,679	0/1:16,0:15:57.84:58,0,95	1/1:9,6:14:7.71:316,8,0	0/1:12,1:14:47.42:96,0,47
chr10	100167531	.	ACG	A	505.81	PASS	AB=0.819;AC=13;AF=0.232;AN=56;BaseQRankSum=7.666;DP=398;FS=0.000;HRun=0;HaplotypeScore=84.6431;InbreedingCoeff=0.2473;MQ=48.43;MQ0=12;MQRankSum=-7.255;QD=4.86;ReadPosRankSum=-1.922;VQSLOD=2.3666;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:13:1.23:0,1,32	0/0:10,0:10:21:0,21,363	0/0:14,0:2:3.01:0,3,37	0/0:24,0:4:6.02:0,6,90	0/0:8,0:8:18.06:0,18,332	0/0:6,3:9:0.47:0,0,1	0/1:9,8:16:8.50:24,0,8	0/1:6,0:4:7.68:80,0,8	0/1:4,2:5:5.58:30,0,6	0/0:25,0:23:63.22:0,63,1147	0/0:11,0:11:30.10:0,30,522	0/0:15,0:15:42.14:0,42,786	0/0:21,0:21:59.94:0,60,1079	0/0:22,0:22:54.12:0,54,994	0/0:13,0:13:36.12:0,36,692	1/1:7,2:9:5.51:45,6,0	0/0:16,0:16:48.15:0,48,821	0/0:1,0:1:2.98:0,3,21	1/1:3,1:2:6.02:67,6,0	0/1:3,1:4:0.14:0,0,0	1/1:14,4:14:2.61:45,3,0	0/0:15,0:15:42.11:0,42,727	0/0:16,0:15:42.14:0,42,740	0/0:37,0:37:87.26:0,87,1614	0/0:20,0:20:48.16:0,48,887	0/1:16,0:13:55.46:123,0,55	0/1:7,5:11:19.92:135,0,20	0/1:9,3:12:27.12:101,0,27
chr10	100167532	.	CGCAT	C	80.89	PASS	AB=0.955;AC=6;AF=0.107;AN=56;BaseQRankSum=4.716;DP=393;FS=2.587;HRun=0;HaplotypeScore=93.0513;InbreedingCoeff=0.1768;MQ=48.72;MQ0=12;MQRankSum=-3.670;QD=1.37;ReadPosRankSum=-1.584;VQSLOD=1.8160;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,8:13:9.03:137,9,0	0/1:10,0:10:9.73:10,0,211	0/0:15,0:2:2.98:0,3,21	0/0:24,0:4:5.97:0,6,46	0/0:7,0:7:18.01:0,18,231	0/0:7,0:8:1.55:0,2,5	0/0:17,0:16:7.93:0,8,30	0/0:6,0:4:1.41:0,1,4	0/0:6,0:5:4.48:0,4,21	0/0:24,0:22:60.10:0,60,1184	0/0:12,0:12:20.34:0,20,365	0/0:15,0:15:42.10:0,42,792	0/0:21,0:21:55.57:0,56,1114	0/0:23,0:23:57.10:0,57,1052	0/0:13,0:13:36.10:0,36,746	0/1:7,2:9:3.55:4,0,16	0/0:16,0:16:45.06:0,45,720	0/0:1,0:1:3.01:0,3,34	0/0:4,0:2:3.47:0,3,26	0/0:4,0:4:2.03:0,2,4	0/0:18,0:14:3.27:0,3,14	0/0:16,0:16:45.06:0,45,712	0/0:16,0:15:32.26:0,32,684	0/0:37,0:37:87.09:0,87,1765	0/0:20,0:20:45.06:0,45,820	0/1:12,0:9:9.07:9,0,94	0/0:10,0:10:18.22:0,18,119	0/1:12,0:12:29.36:33,0,29
chr10	100167535	.	ATG	A	554.78	PASS	AB=0.906;AC=15;AF=0.268;AN=56;BaseQRankSum=7.428;DP=383;FS=0.000;HRun=0;HaplotypeScore=76.0610;InbreedingCoeff=0.3901;MQ=49.20;MQ0=11;MQRankSum=-6.905;QD=5.44;ReadPosRankSum=-1.894;VQSLOD=2.4514;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:12:3.55:12,0,4	0/0:10,0:10:20.64:0,21,307	0/0:18,0:4:12.04:0,12,222	0/0:24,0:4:6.02:0,6,118	0/0:7,0:7:18.05:0,18,327	0/0:5,1:6:0.47:0,0,1	0/1:15,1:15:8.49:41,0,8	1/1:2,3:3:9.03:146,9,0	0/1:5,1:5:5.58:31,0,6	0/0:22,0:21:60.20:0,60,1171	0/0:11,0:11:30.10:0,30,526	0/0:16,0:16:45.14:0,45,875	0/0:20,0:20:56.93:0,57,1137	0/0:23,0:23:57.13:0,57,1142	0/0:13,0:13:36.12:0,36,718	1/1:7,1:8:5.21:45,5,0	0/0:16,0:16:48.16:0,48,968	0/0:1,0:1:0.89:0,1,2	1/1:3,1:2:0.06:44,0,0	0/0:4,0:4:0.67:0,1,3	1/1:17,0:14:1.15:3,1,0	0/0:16,0:16:45.14:0,45,874	0/0:18,0:17:48.16:0,48,945	0/0:38,0:38:93.32:0,93,1839	0/0:18,0:18:45.13:0,45,870	0/1:7,4:8:45.19:195,0,45	0/1:9,0:9:36.79:86,0,37	1/1:9,2:11:3.27:100,3,0
chr10	100167537	.	G	GCACACA	1128.51	PASS	AB=0.861;AC=15;AF=0.268;AN=56;BaseQRankSum=5.851;DP=390;FS=9.676;HRun=0;HaplotypeScore=105.5499;InbreedingCoeff=0.3956;MQ=48.87;MQ0=10;MQRankSum=-7.502;QD=14.47;ReadPosRankSum=-4.297;VQSLOD=0.1915;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:12:9.03:0,9,161	0/0:10,0:10:17.96:0,18,262	0/0:18,0:5:12.04:0,12,187	0/0:24,0:4:5.85:0,6,76	0/0:6,0:6:12.04:0,12,280	1/1:6,1:7:2.82:14,3,0	1/1:13,3:16:2.93:84,3,0	1/1:6,0:4:12:283,12,0	0/1:4,2:5:0.04:0,0,0	0/0:23,0:22:60.51:0,61,1316	0/0:11,0:11:30.04:0,30,545	0/0:17,0:17:45:0,45,933	0/0:21,0:21:54.18:0,54,1221	0/0:23,0:23:56.89:0,57,1222	0/0:14,0:14:33.10:0,33,734	0/1:6,2:8:9.19:61,0,9	0/0:16,0:16:45.15:0,45,982	1/1:0,1:1:3.01:107,3,0	0/1:5,0:3:14.25:106,0,14	1/1:5,1:6:3.13:12,3,0	0/0:18,0:17:2.64:0,3,30	0/0:15,0:15:39.13:0,39,915	0/0:18,0:17:48.16:0,48,1062	0/0:36,0:36:84.24:0,84,1868	0/0:17,0:17:39.11:0,39,866	0/1:11,1:9:86.22:416,0,86	0/0:7,2:9:7.93:0,8,64	0/1:8,2:10:46.16:198,0,46
chr10	100171664	.	GC	G	1660.20	PASS	AB=0.583;AC=25;AF=0.446;AN=56;BaseQRankSum=15.196;DP=415;FS=9.481;HRun=1;HaplotypeScore=121.5170;InbreedingCoeff=0.8823;MQ=66.45;MQ0=0;MQRankSum=-14.783;QD=13.84;ReadPosRankSum=4.147;VQSLOD=2.4871;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:13:35.01:212,35,0	0/0:11,0:11:33.11:0,33,527	0/0:18,0:18:51.17:0,51,793	0/0:29,0:29:78.21:0,78,1175	0/0:26,0:26:78.27:0,78,1242	1/1:1,10:11:26.55:168,27,0	1/1:0,11:11:32.31:198,32,0	1/1:0,6:6:11.90:84,12,0	1/1:0,6:6:16.95:100,17,0	0/0:18,0:18:51.17:0,51,796	0/0:16,0:16:48.16:0,48,767	0/0:16,0:16:48.16:0,48,767	0/0:27,0:27:81.26:0,81,1260	0/0:19,0:19:57.19:0,57,902	0/0:13,0:13:39.12:0,39,598	1/1:0,7:7:17.68:110,18,0	0/0:31,0:31:93.29:0,93,1458	1/1:0,5:6:2.14:91,2,0	1/1:0,10:10:29.78:214,30,0	1/1:1,22:23:54.35:341,54,0	1/1:0,6:6:17.47:101,17,0	0/0:15,0:15:45.15:0,45,715	0/0:20,0:20:60.20:0,60,957	0/0:21,0:21:63.21:0,63,1007	0/0:15,0:15:42.14:0,42,671	0/1:2,5:7:31.06:65,0,31	1/1:1,9:10:20.71:136,21,0	1/1:0,3:3:8.92:62,9,0
chr10	100171666	.	A	ACTGGG	7675.19	PASS	AB=0.583;AC=25;AF=0.446;AN=56;BaseQRankSum=14.943;DP=418;FS=5.164;HRun=0;HaplotypeScore=133.0736;InbreedingCoeff=0.9020;MQ=67.41;MQ0=0;MQRankSum=-14.919;QD=65.60;ReadPosRankSum=4.643;VQSLOD=5.9788;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:12:36.08:839,36,0	0/0:11,0:11:33.11:0,33,769	0/0:21,0:21:51.17:0,51,1127	0/0:29,0:29:75.21:0,75,1585	0/0:27,0:27:81.25:0,81,1765	1/1:0,10:10:24.08:610,24,0	1/1:0,11:11:33.11:832,33,0	1/1:0,6:6:12.04:315,12,0	1/1:0,6:6:18.06:447,18,0	0/0:18,0:18:51.18:0,51,1175	0/0:17,0:17:51.16:0,51,1144	0/0:16,0:16:48.16:0,48,1119	0/0:28,0:28:84.26:0,84,1801	0/0:19,0:19:57.20:0,57,1299	0/0:13,0:13:39.13:0,39,880	1/1:0,7:7:18.06:456,18,0	0/0:31,0:31:93.32:0,93,2105	1/1:1,5:6:8.63:387,9,0	1/1:1,10:10:27.09:714,27,0	1/1:1,22:23:66.23:1559,66,0	1/1:0,6:6:18.06:446,18,0	0/0:15,0:15:45.15:0,45,987	0/0:20,0:20:60.21:0,60,1396	0/0:21,0:21:63.22:0,63,1449	0/0:15,0:15:42.14:0,42,979	0/1:2,5:7:51.48:294,0,51	1/1:0,9:9:21.07:540,21,0	1/1:0,3:3:9.03:235,9,0
chr10	100176110	.	T	TA	5475.32	PASS	AB=0.766;AC=27;AF=0.482;AN=56;BaseQRankSum=-15.947;DP=555;FS=5.733;HRun=11;HaplotypeScore=79.9958;InbreedingCoeff=0.6214;MQ=77.47;MQ0=0;MQRankSum=2.603;QD=16.85;ReadPosRankSum=1.972;VQSLOD=5.8112;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:28.52:0,29,346	0/1:1,6:7:2.23:151,0,2	0/1:12,1:14:29.50:30,0,39	0/1:13,4:17:28.28:77,0,28	1/1:4,23:27:54.04:527,54,0	0/0:2,0:18:26.95:0,27,78	0/0:2,0:12:18.33:0,18,53	0/0:7,0:33:51.91:0,52,151	0/0:1,0:15:19.69:0,20,56	1/1:3,18:22:53.94:532,54,0	1/1:2,16:18:42.08:426,42,0	1/1:10,2:12:32.23:213,32,0	1/1:0,20:20:42.07:421,42,0	1/1:3,8:11:0.81:190,1,0	1/1:6,18:24:33.88:525,34,0	0/0:0,0:12:24.44:0,24,70	1/1:7,25:33:39.70:562,40,0	0/0:5,0:27:40.72:0,41,117	0/0:3,0:22:36.66:0,37,106	0/0:2,0:21:33.47:0,33,96	0/0:0,0:13:24.44:0,24,71	1/1:6,20:26:41.44:560,41,0	0/1:8,19:28:9.76:442,0,10	1/1:1,16:18:39.08:396,39,0	1/1:4,17:21:4.63:410,5,0	0/1:8,1:27:13.78:14,0,79	0/0:4,0:25:37.13:0,37,107	0/0:0,0:9:12.22:0,12,35
chr10	100176116	.	A	AG	400.46	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-6.942;DP=560;FS=11.877;HRun=0;HaplotypeScore=98.5552;InbreedingCoeff=0.0384;MQ=75.04;MQ0=0;MQRankSum=2.323;QD=1.50;ReadPosRankSum=7.939;VQSLOD=0.0555;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:58.79:0,59,770	0/1:9,0:9:6.95:7,0,33	0/0:11,0:11:1.87:0,2,167	0/0:19,0:19:42.28:0,42,331	0/1:29,0:29:26.20:26,0,167	0/0:18,0:18:44.48:0,44,298	0/0:10,0:10:26.70:0,27,181	0/0:32,0:32:92.12:0,92,653	0/0:15,0:15:32.64:0,33,221	0/1:23,0:23:8.91:9,0,107	0/1:17,0:17:15.06:15,0,44	1/1:3,8:11:25.47:331,25,0	1/1:20,0:20:12.63:38,13,0	0/1:10,0:10:6.31:6,0,50	0/1:21,0:21:24.29:24,0,46	0/0:12,0:12:35.61:0,36,241	0/1:34,0:34:16.47:16,0,167	0/0:28,0:28:80.26:0,80,567	0/0:25,0:25:68.29:0,68,479	0/0:24,0:24:62.43:0,62,447	0/0:15,0:15:41.57:0,42,290	0/1:24,0:24:27.81:28,0,101	0/1:29,0:29:11.57:12,0,289	0/1:18,0:18:4.28:37,0,4	0/1:22,0:22:13.60:14,0,112	0/0:29,0:29:76.62:0,77,576	0/0:23,0:23:62.29:0,62,422	0/0:9,0:9:17.80:0,18,121
chr10	100179370	.	G	GC	11994.32	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-17.014;DP=694;FS=10.291;HRun=0;HaplotypeScore=61.5665;InbreedingCoeff=0.9996;MQ=86.26;MQ0=0;MQRankSum=-3.668;QD=44.59;ReadPosRankSum=1.092;VQSLOD=4.6142;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:42.14:0,42,586	0/0:13,0:13:39.12:0,39,528	0/0:25,0:25:69.23:0,69,964	0/0:24,0:24:69.12:0,69,893	0/0:34,0:34:99:0,102,1427	1/1:0,31:31:87.30:1391,87,0	1/1:0,16:16:39.13:624,39,0	1/1:0,18:18:51.16:794,51,0	1/1:0,24:24:69.24:1103,69,0	0/0:35,0:35:99:0,105,1468	0/0:23,0:23:69.23:0,69,961	0/0:25,0:25:75.25:0,75,1049	0/0:27,0:27:78.26:0,78,1091	0/0:32,0:32:96.30:0,96,1308	0/0:29,0:29:87.29:0,87,1217	1/1:0,21:21:60.20:959,60,0	0/0:20,0:20:57.19:0,57,796	1/1:0,9:9:27.09:431,27,0	1/1:2,23:25:72.25:1147,72,0	1/1:0,25:25:75.26:1199,75,0	1/1:0,31:31:78.27:1247,78,0	0/0:32,0:32:96.32:0,96,1343	0/0:32,0:32:96.32:0,96,1342	0/0:33,0:33:96.28:0,96,1321	0/0:27,0:27:81.27:0,81,1129	1/1:0,36:36:99:1647,105,0	1/1:0,22:24:69.19:1070,69,0	1/1:0,9:9:24.08:384,24,0
chr10	100181031	.	G	GT	1418.01	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=10.340;DP=683;FS=1.280;HRun=0;HaplotypeScore=93.1496;InbreedingCoeff=0.9996;MQ=78.02;MQ0=0;MQRankSum=-2.269;QD=32.98;ReadPosRankSum=1.934;VQSLOD=3.2917;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,42:43:99:1513,115,0	0/0:13,0:13:39.13:0,39,545	0/0:36,0:35:87.12:0,87,1353	0/0:17,0:17:46.64:0,47,573	0/0:27,0:27:78.26:0,78,1089	0/0:28,0:28:81.26:0,81,1110	0/0:21,0:21:60.18:0,60,820	0/0:31,0:31:87.28:0,87,1202	0/0:23,0:23:69.22:0,69,948	0/0:33,0:33:99:0,99,1350	0/0:18,0:18:51.13:0,51,650	0/0:26,0:26:72.22:0,72,974	0/0:35,0:35:99:0,105,1467	0/0:22,0:22:66.21:0,66,908	0/0:31,0:31:93.28:0,93,1251	0/0:25,0:25:72.22:0,72,975	0/0:24,0:24:66.22:0,66,920	0/0:12,0:11:33.09:0,33,443	0/0:21,0:21:63.17:0,63,857	0/0:21,0:21:60.15:0,60,781	0/0:32,0:32:96.32:0,96,1341	0/0:20,0:20:57.19:0,57,793	0/0:13,0:13:39.13:0,39,540	0/0:17,0:17:51.17:0,51,713	0/0:21,0:21:63.17:0,63,843	0/0:28,0:28:84.27:0,84,1158	0/0:29,0:29:87.27:0,87,1182	0/0:16,0:16:48.11:0,48,631
chr10	100181378	.	C	CGTGTGT	2636.29	PASS	AB=0.949;AC=28;AF=0.538;AN=52;BaseQRankSum=-1.158;DP=655;FS=4.231;HRun=0;HaplotypeScore=172.7744;InbreedingCoeff=0.6347;MQ=56.46;MQ0=9;MQRankSum=-3.154;QD=7.53;ReadPosRankSum=-2.751;VQSLOD=2.2315;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:31:6.01:0,6,70	0/1:13,0:13:0.03:8,0,0	./.	./.	1/1:22,0:21:7.57:150,8,0	1/1:15,5:20:9.03:249,9,0	0/1:19,0:19:11.88:261,0,12	1/1:23,0:23:12:164,12,0	1/1:21,0:24:9.03:270,9,0	0/0:18,0:18:11.11:0,11,203	0/0:18,0:17:19.57:0,20,278	0/0:19,0:22:23.29:0,23,399	0/0:24,0:24:11.57:0,12,240	0/1:28,0:28:5.90:6,0,232	0/1:30,0:33:10.69:11,0,87	1/1:20,0:20:12.02:284,12,0	0/0:20,0:21:12.04:0,12,222	1/1:20,0:25:15.05:262,15,0	1/1:20,0:19:12:218,12,0	1/1:15,0:14:9.02:156,9,0	1/1:25,0:26:13.53:307,14,0	0/0:21,0:24:18.06:0,18,306	0/0:16,0:16:17.97:0,18,259	0/0:48,0:52:59.14:0,59,922	0/0:25,0:26:9.91:0,10,154	1/1:25,0:25:10.49:108,10,0	1/1:11,4:17:12.04:307,12,0	1/1:14,0:13:5.98:68,6,0
chr10	100181732	.	A	ACTACTACTG	791.15	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=8.484;DP=535;FS=0.000;HRun=0;HaplotypeScore=141.9691;InbreedingCoeff=0.1025;MQ=61.19;MQ0=6;MQRankSum=-7.399;QD=5.73;ReadPosRankSum=0.695;VQSLOD=2.5149;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:24:6.02:220,6,0	0/0:6,0:6:18.05:0,18,462	0/0:33,0:18:51.06:0,51,553	0/0:28,0:14:32.88:0,33,348	0/0:11,0:11:13.47:0,13,501	0/0:29,0:28:6.26:0,6,174	0/0:19,0:17:28.20:0,28,224	0/0:39,0:36:23.28:0,23,431	0/0:12,0:12:3:0,3,25	0/0:19,0:19:57.04:0,57,735	0/0:14,0:13:30.02:0,30,505	0/0:25,0:25:72.12:0,72,1587	0/0:11,0:11:33.06:0,33,771	0/0:21,0:21:60.10:0,60,1275	0/0:16,0:16:48.08:0,48,1033	0/1:27,0:27:99:384,0,131	0/0:8,0:7:23.98:0,24,458	0/1:7,0:6:2.10:2,0,88	0/0:16,0:15:26.20:0,26,323	0/1:24,0:23:32.23:32,0,231	0/0:12,0:12:4.67:0,5,188	0/0:21,0:21:57.05:0,57,1042	0/0:17,0:17:42.03:0,42,752	0/0:18,0:18:51.02:0,51,1026	0/0:17,0:17:45.05:0,45,844	0/1:28,0:27:65.18:65,0,479	0/1:28,0:28:99:210,0,109	0/0:5,0:5:14.96:0,15,119
chr10	100181956	.	C	CA	756.33	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.580;DP=375;FS=13.916;HRun=2;HaplotypeScore=63.3234;InbreedingCoeff=0.6891;MQ=84.25;MQ0=1;MQRankSum=-5.544;QD=22.25;ReadPosRankSum=3.543;VQSLOD=2.2510;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,28:34:76.41:851,76,0	0/0:6,0:6:17.99:0,18,159	0/0:23,0:17:26.09:0,26,287	0/0:27,0:24:39.35:0,39,371	0/0:8,0:8:8.98:0,9,73	0/0:14,0:14:41.80:0,42,328	0/0:26,0:26:44.97:0,45,385	0/0:12,0:12:33.01:0,33,295	0/0:12,0:12:20.97:0,21,176	0/0:12,0:12:20.89:0,21,185	0/0:8,0:8:20.99:0,21,191	0/0:15,0:15:38.97:0,39,338	0/0:16,0:16:35.58:0,36,255	0/0:13,0:13:20.88:0,21,161	0/0:10,0:10:29.89:0,30,238	0/0:16,0:16:35.95:0,36,297	0/0:19,0:19:44.30:0,44,404	0/0:6,0:7:11.95:0,12,93	0/0:12,0:12:29.29:0,29,229	0/0:11,0:11:23.96:0,24,199	0/0:12,0:13:23.99:0,24,207	0/0:5,0:5:5.82:0,6,46	0/0:12,0:12:16.79:0,17,138	0/0:10,0:10:14.98:0,15,125	0/0:14,0:14:32.89:0,33,276	0/0:11,0:11:24:0,24,221	0/0:8,0:8:20.67:0,21,147	0/0:1,0:1:3:0,3,25
chr10	100182386	.	A	AAATAAT	6879.26	PASS	AC=24;AF=0.444;AN=54;BaseQRankSum=-9.010;DP=299;FS=21.158;HRun=0;HaplotypeScore=51.0413;InbreedingCoeff=0.8155;MQ=67.04;MQ0=3;MQRankSum=-6.848;QD=45.86;ReadPosRankSum=-1.924;VQSLOD=2.6026;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,12:15:15.05:457,15,0	0/0:3,0:3:9.03:0,9,187	0/0:5,0:5:8.92:0,9,88	0/0:6,0:6:4.61:0,5,117	0/0:16,0:16:39.10:0,39,747	1/1:1,11:13:24.08:810,24,0	1/1:3,3:7:9.03:268,9,0	1/1:10,22:36:75.24:1936,75,0	1/1:2,4:6:3.01:101,3,0	0/0:14,0:14:30.10:0,30,655	0/0:13,0:13:33.04:0,33,591	0/0:2,0:2:5.99:0,6,50	0/0:8,0:8:24.08:0,24,524	0/0:3,0:3:6:0,6,52	0/0:12,0:12:24.06:0,24,441	1/1:1,4:5:6.02:202,6,0	0/0:36,0:36:90.28:0,90,1892	1/1:3,3:7:3.01:55,3,0	1/1:3,16:21:51.15:1354,51,0	1/1:1,4:5:12.04:345,12,0	./.	0/0:4,0:4:6.02:0,6,131	0/0:7,0:7:12.04:0,12,246	0/0:7,0:7:12.04:0,12,260	0/0:13,0:13:33.10:0,33,655	1/1:3,0:3:9.03:236,9,0	1/1:7,13:18:12.04:405,12,0	1/1:0,11:11:21.07:709,21,0
chr10	100182913	.	AAC	A	2426.58	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=9.963;DP=617;FS=23.590;HRun=0;HaplotypeScore=90.7385;InbreedingCoeff=0.9165;MQ=68.79;MQ0=1;MQRankSum=-2.935;QD=8.92;ReadPosRankSum=-3.929;VQSLOD=0.9160;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:10:87,10,0	0/0:19,0:19:48.03:0,48,619	0/0:25,0:18:34.46:0,34,439	0/0:24,0:19:40.21:0,40,404	0/0:24,0:24:66.10:0,66,864	1/1:24,0:24:25.59:137,26,0	1/1:19,2:21:28.79:206,29,0	1/1:30,1:30:35.77:415,36,0	0/1:21,0:21:22.03:72,0,22	0/0:26,0:26:75.17:0,75,1075	0/0:21,0:21:59.73:0,60,898	0/0:19,0:19:53.55:0,54,731	0/0:24,0:24:70.90:0,71,899	0/0:24,0:24:68.91:0,69,1015	0/0:30,0:30:89.78:0,90,1179	1/1:16,1:17:28.26:163,28,0	0/0:23,0:23:66.19:0,66,1006	1/1:11,1:12:17.96:115,18,0	1/1:31,1:30:60.20:448,60,0	1/1:14,1:15:18.89:181,19,0	1/1:12,0:12:23.32:117,23,0	0/0:19,0:19:54.10:0,54,763	0/0:19,0:19:53.61:0,54,760	0/0:25,0:25:74.92:0,75,1123	0/0:23,0:23:60.16:0,60,929	1/1:25,1:26:36.81:363,37,0	1/1:30,1:31:33.12:189,33,0	1/1:10,0:10:15.19:161,15,0
chr10	100182914	.	AC	A	5651.59	PASS	AB=0.512;AC=25;AF=0.446;AN=56;BaseQRankSum=7.500;DP=618;FS=19.819;HRun=1;HaplotypeScore=70.8574;InbreedingCoeff=0.9065;MQ=69.49;MQ0=1;MQRankSum=-2.349;QD=20.78;ReadPosRankSum=-4.403;VQSLOD=2.8228;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:22.52:156,23,0	0/0:18,0:18:47.97:0,48,496	0/0:26,0:19:1.52:0,2,276	0/0:24,0:19:41.62:0,42,342	0/0:23,0:23:65.66:0,66,676	1/1:2,22:24:27.07:354,27,0	1/1:2,18:20:30.03:360,30,0	1/1:19,11:29:75.54:837,76,0	0/1:1,20:21:8.23:266,0,8	0/0:28,0:28:74.78:0,75,839	0/0:21,0:21:46.96:0,47,661	0/0:19,0:19:28.36:0,28,539	0/0:24,0:24:57.53:0,58,645	0/0:25,0:25:68.11:0,68,806	0/0:31,0:31:80.36:0,80,890	1/1:1,16:17:30.09:393,30,0	0/0:23,0:23:66.15:0,66,785	1/1:10,3:13:30.51:333,31,0	1/1:21,11:30:75.15:837,75,0	1/1:2,13:15:36.27:357,36,0	1/1:0,12:12:27:331,27,0	0/0:19,0:19:53.96:0,54,590	0/0:19,0:19:53.60:0,54,603	0/0:25,0:25:68.11:0,68,858	0/0:21,0:21:60.09:0,60,715	1/1:17,9:26:67.55:667,68,0	1/1:2,29:31:39.01:459,39,0	1/1:6,4:10:27.51:303,28,0
chr10	100182915	.	CA	C	1171.07	PASS	AB=0.988;AC=19;AF=0.339;AN=56;BaseQRankSum=12.376;DP=623;FS=20.440;HRun=10;HaplotypeScore=85.4354;InbreedingCoeff=0.3039;MQ=69.36;MQ0=1;MQRankSum=-0.594;QD=3.85;ReadPosRankSum=-1.754;VQSLOD=-0.5118;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:9.34:0,9,95	0/0:18,0:18:36.10:0,36,397	0/1:25,2:20:28.04:28,0,262	0/1:21,1:17:1.68:2,0,157	0/0:23,0:24:41.95:0,42,446	1/1:24,0:24:25:133,25,0	1/1:21,0:21:0.92:91,1,0	0/1:30,0:29:74.37:130,0,74	0/1:21,0:21:9.91:84,0,10	0/0:27,0:27:66.16:0,66,713	0/0:19,2:21:8.07:0,8,544	0/0:19,0:21:26.95:0,27,428	0/0:23,1:24:59.90:0,60,615	0/0:25,0:25:72.16:0,72,772	0/0:30,2:32:23:0,23,666	1/1:17,0:17:27.75:162,28,0	0/0:23,0:23:60.16:0,60,664	0/1:13,0:13:12.20:60,0,12	0/1:32,0:30:1.33:179,0,1	0/1:16,0:16:34.24:71,0,34	1/1:12,0:12:20.56:103,21,0	0/0:17,0:18:44.94:0,45,477	0/0:18,0:18:45.12:0,45,495	0/0:25,0:25:69.19:0,69,763	0/0:22,0:22:57.14:0,57,622	0/1:26,0:26:78.40:88,0,78	1/1:30,1:31:30.54:172,31,0	0/1:12,0:12:48.34:48,0,55
chr10	100182925	.	A	AAC	86.78	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.314;DP=587;FS=0.000;HRun=0;HaplotypeScore=100.4509;InbreedingCoeff=0.9801;MQ=73.64;MQ0=1;MQRankSum=-1.362;QD=5.10;ReadPosRankSum=-3.833;VQSLOD=1.5135;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:17:15.76:176,16,0	0/0:17,0:18:48.04:0,48,588	0/0:28,0:24:51.47:0,51,600	0/0:20,0:15:32.66:0,33,320	0/0:20,0:20:48.69:0,49,590	0/0:18,0:18:26.85:0,27,257	0/0:19,0:19:31.84:0,32,320	0/0:33,0:32:57.02:0,57,730	0/0:21,0:21:30.04:0,30,302	0/0:23,0:23:69.17:0,69,900	0/0:21,0:21:60.15:0,60,783	0/0:18,0:18:50.34:0,50,629	0/0:22,0:22:53.22:0,53,726	0/0:26,0:26:77.90:0,78,1007	0/0:28,0:28:81.14:0,81,995	0/0:18,0:18:35.68:0,36,301	0/0:23,0:23:66.20:0,66,888	0/0:13,0:13:31.57:0,32,296	0/0:32,0:30:75.11:0,75,662	0/0:14,0:14:27.74:0,28,260	0/0:11,0:11:24.03:0,24,245	0/0:17,0:17:44.19:0,44,551	0/0:15,0:15:45.14:0,45,603	0/0:28,0:28:81.19:0,81,1056	0/0:21,0:21:57.16:0,57,776	0/0:24,0:24:50.91:0,51,537	0/0:29,0:29:36.52:0,37,314	0/0:10,0:10:29.84:0,30,272
chr10	100183105	.	CTGAAT	C	10165.51	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=10.628;DP=587;FS=18.241;HRun=0;HaplotypeScore=116.4859;InbreedingCoeff=0.9950;MQ=87.12;MQ0=0;MQRankSum=-8.638;QD=46.21;ReadPosRankSum=1.260;VQSLOD=4.0485;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,3281	0/0:12,0:12:36.12:0,36,1118	0/0:16,0:16:45.15:0,45,1258	0/0:31,0:31:75.25:0,75,2143	0/0:27,0:27:72.25:0,72,2246	1/1:3,18:20:42.14:895,42,0	1/1:0,18:16:33.11:703,33,0	1/1:3,14:16:39.08:657,39,0	1/1:0,14:13:33.11:702,33,0	0/0:24,0:24:69.23:0,69,2038	0/0:18,0:18:54.19:0,54,1658	0/0:29,0:29:72.25:0,72,2248	0/0:27,0:27:72.25:0,72,2178	0/0:29,0:29:72.25:0,72,2242	0/0:15,0:15:45.15:0,45,1410	1/1:1,16:16:39.13:831,39,0	0/0:21,0:21:60.21:0,60,1880	1/1:0,10:10:21.07:448,21,0	1/1:6,21:24:51.16:1048,51,0	1/1:2,24:26:66.23:1406,66,0	1/1:0,20:20:42.14:895,42,0	0/0:20,0:20:57.20:0,57,1781	0/0:21,0:21:57.18:0,57,1717	0/0:24,0:24:66.23:0,66,2022	0/0:15,0:15:42.14:0,42,1247	1/1:1,23:23:66.20:1366,66,0	1/1:1,18:19:45.15:959,45,0	1/1:0,7:7:12.04:256,12,0
chr10	100183251	.	GCCTTCGCCGCGCCAGC	G	2508.46	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=5.795;DP=486;FS=21.870;HRun=0;HaplotypeScore=177.3105;InbreedingCoeff=0.6345;MQ=44.43;MQ0=27;MQRankSum=-5.671;QD=73.78;ReadPosRankSum=1.567;VQSLOD=2.0205;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,30:29:57.20:2603,57,0	0/0:13,0:13:30.10:0,30,2085	./.	0/0:1,0:1:3.01:0,3,49	0/0:3,0:3:2.47:0,2,138	0/0:17,0:15:30.10:0,30,1965	0/0:45,0:36:96.33:0,96,6256	0/0:23,0:16:45.15:0,45,2916	0/0:17,0:16:15.01:0,15,900	0/0:9,0:9:27.09:0,27,2059	0/0:6,0:5:12.04:0,12,450	0/0:26,0:24:47.24:0,47,2796	0/0:15,0:14:35.72:0,36,2443	0/0:29,0:29:63.20:0,63,4311	0/0:10,0:10:24.07:0,24,1725	0/0:9,0:8:21.07:0,21,1162	0/0:27,0:23:39.13:0,39,2691	0/0:28,0:27:56.59:0,57,2702	0/0:16,0:12:33.11:0,33,1960	0/0:11,0:9:23.59:0,24,1433	0/0:48,0:40:68.59:0,69,3898	0/0:10,0:10:12:0,12,447	0/0:6,0:6:8.74:0,9,327	0/0:28,0:25:48.16:0,48,2701	0/0:12,0:12:24.06:0,24,1484	0/0:17,0:16:48.16:0,48,3133	0/0:13,0:12:21.07:0,21,1320	0/0:11,0:7:12.04:0,12,885
chr10	100184205	.	T	TA	8547.72	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-17.619;DP=728;FS=1.293;HRun=7;HaplotypeScore=68.0288;InbreedingCoeff=0.9968;MQ=81.71;MQ0=0;MQRankSum=-1.703;QD=29.78;ReadPosRankSum=1.802;VQSLOD=5.3684;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1014	0/0:9,0:9:24.04:0,24,232	0/0:22,0:22:24.87:0,25,306	0/0:20,0:20:42.02:0,42,393	0/0:31,0:31:84.13:0,84,811	1/1:1,18:19:54.17:652,54,0	1/1:7,21:28:60.18:725,60,0	1/1:3,20:23:60.18:724,60,0	1/1:2,22:24:63.19:761,63,0	0/0:33,0:33:96.14:0,96,922	0/0:22,0:22:60.10:0,60,579	0/0:27,0:27:69.10:0,69,665	0/0:31,0:31:84.13:0,84,811	0/0:29,0:29:81.13:0,81,781	0/0:38,0:38:99:0,107,1014	1/1:2,22:24:57.17:689,57,0	0/0:37,0:37:93.09:0,93,882	1/1:4,15:19:36.78:467,37,0	1/1:3,15:18:45.14:542,45,0	1/1:1,31:32:90.28:1087,90,0	1/1:3,15:18:42.13:507,42,0	0/0:24,0:24:66.10:0,66,637	0/0:30,0:30:84.13:0,84,811	0/0:33,0:33:70.22:0,70,708	0/0:17,0:17:48.06:0,48,459	1/1:8,21:29:14.25:726,14,0	1/1:3,34:36:93.29:1123,93,0	1/1:0,16:16:45.14:544,45,0
chr10	100184627	.	TA	T	8539.52	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=17.300;DP=637;FS=3.890;HRun=7;HaplotypeScore=77.8131;InbreedingCoeff=0.9439;MQ=77.18;MQ0=0;MQRankSum=-1.865;QD=26.60;ReadPosRankSum=-0.962;VQSLOD=5.1232;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.21:0,66,830	0/0:14,0:14:42.12:0,42,515	0/1:13,0:12:4.65:5,0,164	0/0:16,0:16:15.49:0,15,408	0/0:31,0:31:84.27:0,84,1056	1/1:1,32:33:93.21:949,93,0	1/1:0,12:12:33.08:337,33,0	1/1:3,22:25:66.12:660,66,0	1/1:1,18:19:51.12:520,51,0	0/0:24,0:24:60.19:0,60,755	0/0:24,0:24:69.22:0,69,868	0/0:28,0:28:84.25:0,84,1039	0/0:20,0:20:60.19:0,60,754	0/0:24,0:24:66.21:0,66,830	0/0:21,0:21:60.19:0,60,755	1/1:1,18:19:51.12:520,51,0	0/0:13,0:13:36.12:0,36,452	1/1:1,14:15:36.08:367,36,0	1/1:3,28:31:84.19:856,84,0	1/1:3,35:38:99:1040,102,0	1/1:0,21:21:63.14:643,63,0	0/0:17,0:17:51.16:0,51,641	0/0:28,0:28:78.25:0,78,979	0/0:10,0:10:30.10:0,30,377	0/0:23,0:23:66.19:0,66,815	1/1:3,37:40:76.49:1081,76,0	1/1:1,32:33:96.22:979,96,0	1/1:1,21:22:57.13:582,57,0
chr10	100184744	.	T	TG	438.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.028;DP=587;FS=9.968;HRun=4;HaplotypeScore=60.8327;InbreedingCoeff=0.9975;MQ=80.74;MQ0=0;MQRankSum=-3.146;QD=21.92;ReadPosRankSum=0.809;VQSLOD=2.0998;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:20:39.13:533,39,0	0/0:17,0:17:51.15:0,51,578	0/0:16,0:16:35.26:0,35,384	0/0:19,0:18:27.90:0,28,401	0/0:32,0:32:87.25:0,87,986	0/0:31,0:31:87.23:0,87,975	0/0:15,0:15:39.08:0,39,420	0/0:19,0:19:45.13:0,45,510	0/0:19,0:19:54.14:0,54,604	0/0:12,0:12:27.07:0,27,306	0/0:28,0:28:75.21:0,75,849	0/0:23,0:23:66.15:0,66,724	0/0:17,0:17:45.11:0,45,493	0/0:25,0:25:72.19:0,72,806	0/0:21,0:21:54.15:0,54,612	0/0:16,0:16:45.13:0,45,510	0/0:14,0:14:36.10:0,36,408	0/0:15,0:15:36.57:0,37,409	0/0:21,0:21:54.15:0,54,611	0/0:30,0:30:87.25:0,87,986	0/0:29,0:29:81.22:0,81,911	0/0:20,0:20:57.15:0,57,637	0/0:32,0:32:90.26:0,90,1019	0/0:17,0:17:45.13:0,45,510	0/0:18,0:18:45.13:0,45,510	0/0:24,0:24:66.19:0,66,748	0/0:19,0:19:57.16:0,57,646	0/0:18,0:18:49.62:0,50,576
chr10	100185153	.	AT	A	6885.06	PASS	AB=0.524;AC=23;AF=0.411;AN=56;BaseQRankSum=18.634;DP=548;FS=3.288;HRun=1;HaplotypeScore=107.9465;InbreedingCoeff=0.9375;MQ=86.38;MQ0=0;MQRankSum=-9.226;QD=29.42;ReadPosRankSum=0.330;VQSLOD=4.6066;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1530	0/0:7,0:7:21.07:0,21,333	0/0:20,1:21:55.97:0,56,759	0/0:18,0:19:47.05:0,47,767	0/0:23,0:23:69.20:0,69,1036	1/1:1,23:24:61.25:780,61,0	1/1:1,13:14:42.08:477,42,0	1/1:4,26:30:80.18:921,80,0	1/1:1,13:14:30.56:348,31,0	0/0:17,0:17:51.17:0,51,814	0/0:23,0:23:66.21:0,66,1032	0/0:26,0:26:78.24:0,78,1199	0/0:20,0:20:60.17:0,60,932	0/0:16,0:16:48.16:0,48,764	0/0:15,0:15:45.15:0,45,714	1/1:1,21:22:60.65:722,61,0	0/0:27,0:27:81.15:0,81,1214	1/1:0,12:12:36.11:431,36,0	1/1:4,17:21:48.13:568,48,0	1/1:0,12:12:33.03:377,33,0	1/1:1,22:23:51.15:602,51,0	0/0:19,0:19:54.18:0,54,863	0/0:14,0:14:39.13:0,39,614	0/0:18,0:18:54.17:0,54,839	0/0:15,0:15:45.15:0,45,711	0/1:3,30:33:6.28:886,0,6	1/1:1,20:21:52.39:598,52,0	1/1:0,8:8:15.04:175,15,0
chr10	100185372	.	A	AT	171.99	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=4.237;DP=368;FS=15.909;HRun=9;HaplotypeScore=57.2335;InbreedingCoeff=0.4486;MQ=73.10;MQ0=2;MQRankSum=-1.522;QD=4.30;ReadPosRankSum=-1.209;VQSLOD=-0.2544;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,8:11:24.06:264,24,0	0/0:13,0:13:35.97:0,36,307	0/0:16,0:15:23.64:0,24,197	0/1:9,0:9:1.52:2,0,83	0/0:16,0:16:38.99:0,39,338	0/0:13,0:13:29.45:0,29,243	0/0:15,0:15:17.25:0,17,219	0/1:20,0:20:5.89:6,0,135	0/0:5,0:6:3.13:0,3,69	0/0:13,0:13:29.98:0,30,260	0/0:13,0:13:32.99:0,33,286	0/0:23,0:23:65.93:0,66,561	0/0:15,0:15:38.99:0,39,338	0/0:7,0:7:20.99:0,21,181	0/0:14,0:14:38.98:0,39,338	0/0:9,0:9:17.57:0,18,153	0/0:13,0:13:26.98:0,27,234	0/0:3,0:3:5.99:0,6,52	0/0:11,0:11:29.99:0,30,260	0/0:15,0:15:35.55:0,36,308	0/0:6,0:5:14.99:0,15,128	0/0:16,0:16:41.98:0,42,365	0/0:20,0:20:53.98:0,54,468	0/0:12,0:12:23.99:0,24,208	0/0:16,0:16:38.96:0,39,335	0/0:18,0:18:32.60:0,33,293	0/0:18,0:18:17.50:0,18,264	0/0:7,0:6:11.74:0,12,93
chr10	100185481	.	CT	C	365.37	PASS	AB=0.939;AC=6;AF=0.107;AN=56;BaseQRankSum=3.964;DP=436;FS=0.000;HRun=11;HaplotypeScore=52.0162;InbreedingCoeff=0.6418;MQ=80.84;MQ0=1;MQRankSum=1.843;QD=5.30;ReadPosRankSum=1.607;VQSLOD=0.6980;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,9:12:20.97:172,21,0	0/0:5,0:5:15.04:0,15,160	0/0:18,0:17:18.02:0,18,222	0/1:19,1:19:3.12:3,0,164	1/1:8,15:24:15.38:308,15,0	0/0:15,1:17:20.29:0,20,392	0/0:12,0:12:30.06:0,30,312	0/0:22,0:22:48.12:0,48,511	0/0:11,1:11:2.27:0,2,183	0/0:17,0:17:45.11:0,45,480	0/0:26,1:27:47.52:0,48,702	0/0:14,0:14:30.92:0,31,309	0/0:13,0:13:32.89:0,33,312	0/0:14,0:14:36.01:0,36,360	0/0:13,0:13:36.09:0,36,383	0/0:13,0:13:39.10:0,39,416	0/0:17,0:17:36.07:0,36,372	0/0:3,0:3:9.01:0,9,88	0/0:21,0:20:48.02:0,48,486	0/0:14,0:14:39.07:0,39,397	0/0:17,0:17:39.10:0,39,415	0/0:16,1:17:23.48:0,23,455	0/1:11,1:12:0.60:1,0,191	0/0:11,0:11:30.08:0,30,320	0/0:18,0:18:49.68:0,50,514	0/0:20,0:20:48.05:0,48,484	0/0:19,0:18:47.94:0,48,476	0/0:11,1:12:11.41:0,11,309
chr10	100185598	.	TTGTGTGTGTGTG	T	2257.27	PASS	AB=0.834;AC=16;AF=0.296;AN=54;BaseQRankSum=4.794;DP=412;FS=0.865;HRun=0;HaplotypeScore=138.3791;InbreedingCoeff=0.3730;MQ=62.66;MQ0=10;MQRankSum=-6.092;QD=14.66;ReadPosRankSum=-0.011;VQSLOD=2.6494;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:19:6.88:0,7,166	0/0:3,0:3:0.47:0,0,1	0/0:19,0:9:2.90:0,3,16	0/0:22,0:16:6.01:0,6,142	0/0:14,0:13:15.05:0,15,661	1/1:13,3:16:18.06:468,18,0	1/1:14,6:20:8.10:231,8,0	0/1:9,5:14:79.88:80,0,97	1/1:4,3:7:6.02:176,6,0	0/0:10,0:9:15.05:0,15,608	0/0:15,0:14:14.85:0,15,804	0/0:15,0:15:18.06:0,18,807	0/0:13,0:13:21.04:0,21,811	0/0:19,0:19:26.89:0,27,1261	0/0:16,0:16:18.06:0,18,757	0/1:5,9:14:7.49:129,0,7	0/0:19,0:17:30.08:0,30,1185	0/1:13,0:12:49.78:50,0,106	0/1:17,0:16:1.83:164,0,2	1/1:7,4:12:3.01:73,3,0	./.	0/0:14,0:14:12.51:0,13,642	0/0:7,0:9:8.97:0,9,266	0/0:28,0:27:21.03:0,21,742	0/0:20,0:19:29.88:0,30,1367	0/1:12,2:14:99:198,0,167	1/1:13,8:20:24.08:758,24,0	0/1:4,1:5:64.53:98,0,65
chr10	100185641	.	TATGAAAGA	T	651.91	PASS	AB=0.943;AC=14;AF=0.269;AN=52;BaseQRankSum=3.458;DP=360;FS=7.193;HRun=0;HaplotypeScore=133.4391;InbreedingCoeff=-0.3892;MQ=35.07;MQ0=35;MQRankSum=0.075;QD=3.23;ReadPosRankSum=4.106;VQSLOD=1.8430;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:13:2.57:0,3,10	0/1:3,4:7:12.23:71,0,12	./.	./.	0/0:12,0:11:8.95:0,9,133	0/1:17,0:17:30.73:35,0,31	0/0:17,0:15:15.96:0,16,176	0/0:17,0:14:27.09:0,27,369	0/0:13,0:13:7.36:0,7,49	0/1:9,0:8:16.89:17,0,196	0/0:13,0:12:12.69:0,13,176	0/1:11,0:12:47.49:47,0,127	0/0:13,0:11:25.21:0,25,287	0/1:18,0:18:27.87:28,0,222	0/1:14,0:14:45.61:46,0,86	0/0:15,0:15:4.78:0,5,39	0/1:23,0:20:64.80:65,0,154	0/1:10,0:8:51.44:51,0,155	0/1:12,0:13:99:114,0,148	0/0:9,0:9:5.84:0,6,76	0/0:5,0:4:2.04:0,2,6	0/1:13,1:14:51.53:52,0,179	0/1:10,0:8:10.41:54,0,10	0/1:21,0:20:33.97:34,0,117	0/1:16,0:15:2.19:2,0,174	0/0:12,0:12:6.05:0,6,327	0/1:14,0:15:45.48:177,0,45	0/0:1,0:1:2.94:0,3,18
chr10	100185646	.	AAGAGAGAGAGAGAG	A	1030.76	PASS	AB=0.865;AC=12;AF=0.261;AN=46;BaseQRankSum=4.255;DP=359;FS=12.524;HRun=0;HaplotypeScore=153.0287;InbreedingCoeff=0.3781;MQ=35.20;MQ0=36;MQRankSum=-1.574;QD=8.74;ReadPosRankSum=-1.443;VQSLOD=1.6033;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:10:2.50:0,2,9	0/0:8,0:8:6.02:0,6,123	./.	./.	0/1:9,0:10:0:0,0,0	1/1:14,7:20:5.57:50,6,0	0/0:15,0:13:2.47:0,2,94	0/1:15,0:12:0:0,0,0	0/1:9,7:16:9.67:29,0,10	0/0:6,0:7:12.04:0,12,300	0/0:14,0:13:0:0,0,0	0/0:10,0:12:9.03:0,9,217	0/0:13,0:11:18.06:0,18,452	0/0:18,0:18:7.73:0,8,473	0/0:14,0:15:12.04:0,12,372	0/0:9,1:11:0.63:0,1,5	0/0:21,0:18:9.03:0,9,267	0/1:10,0:9:11.74:92,0,12	1/1:10,3:14:9.18:531,9,0	./.	./.	0/0:12,0:14:8.07:0,8,239	0/0:8,0:8:2.49:0,2,79	0/0:19,0:19:5.93:0,6,82	0/0:14,0:16:2.06:0,2,101	1/1:10,0:15:3.01:98,3,0	1/1:13,1:15:13.07:359,13,0	./.
chr10	100186446	.	G	GAA	2163.08	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=11.121;DP=730;FS=5.194;HRun=7;HaplotypeScore=125.5704;InbreedingCoeff=0.6464;MQ=76.24;MQ0=0;MQRankSum=-2.062;QD=36.66;ReadPosRankSum=0.384;VQSLOD=2.3794;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,47:51:99:2238,141,0	0/0:15,0:15:39.11:0,39,454	0/0:17,0:17:45.12:0,45,512	0/0:13,0:14:22.02:0,22,228	0/0:42,0:42:99:0,111,1255	0/0:14,0:14:39.11:0,39,449	0/0:21,0:21:51:0,51,556	0/0:33,0:33:76.75:0,77,920	0/0:24,0:24:62.01:0,62,704	0/0:43,0:43:99:0,117,1337	0/0:24,0:24:63.17:0,63,724	0/0:30,0:30:84.22:0,84,956	0/0:23,0:24:62.91:0,63,711	0/0:32,0:32:93.25:0,93,1062	0/0:25,0:25:63.18:0,63,734	0/0:23,0:23:60.13:0,60,672	0/0:21,0:21:57.13:0,57,638	0/0:14,0:14:39.11:0,39,450	0/0:33,0:33:90.15:0,90,983	0/0:46,0:46:99:0,114,1271	0/0:41,0:41:99:0,105,1201	0/0:24,0:24:63.17:0,63,724	0/0:20,0:20:57.16:0,57,653	0/0:25,0:25:66.19:0,66,769	0/0:23,0:23:60.17:0,60,699	0/0:23,0:23:63.09:0,63,704	0/0:20,0:20:45.11:0,45,519	0/1:8,0:8:31.46:31,0,152
chr10	100186892	.	G	GAACAAGA	2312.07	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.530;DP=723;FS=9.197;HRun=0;HaplotypeScore=161.4281;InbreedingCoeff=0.9919;MQ=91.79;MQ0=0;MQRankSum=-7.690;QD=77.07;ReadPosRankSum=-0.950;VQSLOD=3.7287;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,20:30:60.21:2407,60,0	0/0:6,0:6:18.05:0,18,422	0/0:32,0:32:86.95:0,87,1959	0/0:28,0:29:72.71:0,73,1628	0/0:32,0:32:84.23:0,84,2017	0/0:23,0:23:69.22:0,69,1601	0/0:16,0:16:48.16:0,48,1211	0/0:43,0:42:99:0,120,2914	0/0:23,0:23:69.24:0,69,1829	0/0:33,0:33:99:0,99,2363	0/0:17,0:17:51.18:0,51,1369	0/0:26,0:26:78.25:0,78,1952	0/0:22,0:22:66.14:0,66,1647	0/0:31,0:31:84.26:0,84,2067	0/0:26,0:26:72.23:0,72,1872	0/0:23,0:23:69.22:0,69,1804	0/0:37,0:37:99:0,111,2654	0/0:13,0:13:36.11:0,36,835	0/0:27,0:27:75.24:0,75,1870	0/0:29,0:29:81.28:0,81,2112	0/0:30,0:30:90.28:0,90,2336	0/0:27,0:27:81.28:0,81,2133	0/0:17,0:17:51.16:0,51,1316	0/0:34,0:34:99:0,102,2564	0/0:19,0:19:57.20:0,57,1492	0/0:25,0:25:72.24:0,72,1785	0/0:38,0:37:99:0,114,2917	0/0:15,0:15:40.25:0,40,1118
chr10	100187351	.	TC	T	201.45	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.708;DP=525;FS=5.931;HRun=1;HaplotypeScore=49.9466;InbreedingCoeff=0.9387;MQ=82.29;MQ0=0;MQRankSum=-3.113;QD=28.78;ReadPosRankSum=0.518;VQSLOD=3.0641;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:21.07:294,21,0	0/0:10,0:10:30.10:0,30,475	0/0:13,0:13:36.02:0,36,517	0/0:15,0:15:38.92:0,39,569	0/0:19,0:19:57.18:0,57,888	0/0:16,0:16:48.13:0,48,719	0/0:9,0:9:27.09:0,27,431	0/0:38,0:38:99:0,114,1817	0/0:19,0:19:57.18:0,57,884	0/0:21,0:21:63.20:0,63,950	0/0:25,0:25:66.21:0,66,1016	0/0:21,0:21:63.19:0,63,979	0/0:20,0:20:60.19:0,60,927	0/0:20,0:20:57.19:0,57,911	0/0:26,0:26:78.25:0,78,1224	0/0:21,0:21:60.20:0,60,959	0/0:12,0:12:36.11:0,36,549	0/0:9,0:9:27.09:0,27,413	0/0:15,0:15:45.12:0,45,672	0/0:20,0:20:60.20:0,60,957	0/0:14,0:14:42.13:0,42,647	0/0:24,0:24:69.20:0,69,1056	0/0:21,0:21:60.20:0,60,951	0/0:22,0:22:66.23:0,66,1055	0/0:19,0:19:57.16:0,57,858	0/0:24,0:24:72.25:0,72,1151	0/0:42,0:42:99:0,123,1963	0/0:3,0:3:9.03:0,9,144
chr10	100187570	.	A	AT	6651.54	PASS	AB=0.580;AC=24;AF=0.429;AN=56;BaseQRankSum=5.392;DP=613;FS=8.920;HRun=9;HaplotypeScore=71.1827;InbreedingCoeff=0.8819;MQ=69.79;MQ0=0;MQRankSum=-0.148;QD=22.17;ReadPosRankSum=-2.429;VQSLOD=4.4436;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,2:22:54.27:294,54,0	0/0:10,0:10:26.99:0,27,234	0/0:12,0:12:23.99:0,24,208	0/0:11,0:10:9.05:0,9,143	0/0:34,1:35:65.80:0,66,800	1/1:2,23:25:60.16:664,60,0	0/1:3,11:14:1.99:208,0,2	1/1:12,28:41:77.66:809,78,0	1/1:2,21:23:48.13:531,48,0	0/0:26,0:27:74.02:0,74,631	0/0:24,0:24:71.99:0,72,625	0/0:16,0:16:41.99:0,42,365	0/0:18,0:18:50.99:0,51,443	0/0:19,0:19:44.97:0,45,391	0/0:22,0:22:62.98:0,63,546	1/1:1,12:13:30.08:332,30,0	0/0:20,0:20:59.94:0,60,514	1/1:3,7:10:21.06:232,21,0	1/1:7,17:24:28.06:527,28,0	1/1:7,27:34:78.21:862,78,0	0/1:2,6:9:8.94:176,0,9	0/0:19,0:19:53.98:0,54,469	0/0:22,1:22:26.80:0,27,458	0/0:25,0:25:71.93:0,72,618	0/0:31,0:31:67.84:0,68,756	1/1:5,26:31:49.11:748,49,0	1/1:9,33:42:64.20:936,64,0	1/1:2,10:12:30.08:332,30,0
chr10	100187991	.	T	TC	364.23	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.947;DP=621;FS=0.000;HRun=0;HaplotypeScore=74.6090;InbreedingCoeff=0.9952;MQ=59.74;MQ0=4;MQRankSum=-4.535;QD=21.43;ReadPosRankSum=-1.606;VQSLOD=4.4694;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,12:17:37.52:459,38,0	0/0:16,0:16:48.16:0,48,671	0/0:26,0:13:39.12:0,39,522	0/0:20,0:12:21.75:0,22,321	0/0:27,0:26:78.24:0,78,1056	0/0:13,0:13:36.12:0,36,503	0/0:25,0:25:69.20:0,69,930	0/0:23,0:22:60.11:0,60,808	0/0:15,0:15:39.09:0,39,523	0/0:29,0:29:84.28:0,84,1161	0/0:20,0:20:60.18:0,60,808	0/0:16,0:16:48.15:0,48,656	0/0:21,0:21:63.21:0,63,880	0/0:25,0:25:75.23:0,75,1017	0/0:19,0:19:54.17:0,54,725	0/0:26,0:26:75.24:0,75,1032	0/0:38,0:38:99:0,114,1525	0/0:14,0:14:42.12:0,42,568	0/0:30,0:28:78.19:0,78,1033	0/0:33,0:32:96.32:0,96,1341	0/0:9,0:9:27.05:0,27,355	0/0:19,0:19:57.19:0,57,797	0/0:24,0:24:72.24:0,72,1006	0/0:27,0:27:81.26:0,81,1112	0/0:23,0:23:69.21:0,69,920	0/0:22,0:22:66.22:0,66,922	0/0:22,0:22:63.13:0,63,796	0/0:22,0:22:66.22:0,66,921
chr10	100188017	.	C	CT	5857.18	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-6.860;DP=640;FS=2.034;HRun=9;HaplotypeScore=64.0778;InbreedingCoeff=0.9329;MQ=60.41;MQ0=13;MQRankSum=-4.014;QD=19.59;ReadPosRankSum=-0.247;VQSLOD=5.0135;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:12:8.99:43,9,0	0/0:13,0:13:24.01:0,24,220	0/0:36,0:12:13.65:0,14,149	0/1:26,0:7:3.66:4,0,32	0/0:20,0:19:40.49:0,40,376	1/1:1,12:13:30.09:346,30,0	1/1:3,20:23:48.14:554,48,0	1/1:10,20:30:43.42:624,43,0	1/1:2,11:13:29.92:326,30,0	0/0:24,0:24:47.99:0,48,437	0/0:23,1:24:36.20:0,36,473	0/0:14,0:14:32.94:0,33,288	0/0:23,0:23:47.99:0,48,435	0/0:20,0:20:45.01:0,45,412	0/0:26,0:26:72.03:0,72,657	1/1:3,18:21:11.99:388,12,0	0/0:43,0:43:99:0,111,1009	1/1:2,11:13:30.56:347,31,0	1/1:11,16:26:48.09:526,48,0	1/1:6,35:40:99:1087,99,0	1/1:1,11:10:18.05:208,18,0	0/0:16,0:16:36.01:0,36,329	0/0:29,0:28:69:0,69,623	0/0:28,0:28:80.14:0,80,702	0/0:25,0:25:62.98:0,63,566	1/1:7,17:24:51.14:578,51,0	1/1:4,21:25:42.12:482,42,0	1/1:9,9:18:30.09:346,30,0
chr10	100188099	.	CT	C	617.08	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.473;DP=561;FS=0.000;HRun=1;HaplotypeScore=65.6476;InbreedingCoeff=0.9827;MQ=67.93;MQ0=4;MQRankSum=-4.195;QD=29.38;ReadPosRankSum=1.573;VQSLOD=3.3387;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:60.18:712,60,0	0/0:11,0:11:33.10:0,33,504	0/0:8,0:7:18.06:0,18,270	0/0:21,0:17:45.14:0,45,678	0/0:28,0:28:84.27:0,84,1317	0/0:19,0:19:54.14:0,54,821	0/0:18,0:18:54.15:0,54,815	0/0:28,0:28:81.27:0,81,1263	0/0:15,0:15:42.14:0,42,668	0/0:21,0:21:63.21:0,63,985	0/0:19,0:19:57.16:0,57,863	0/0:14,0:14:42.14:0,42,671	0/0:20,0:20:60.18:0,60,914	0/0:17,0:17:51.16:0,51,791	0/0:20,0:20:60.19:0,60,934	0/0:17,0:16:33.11:0,33,527	0/0:28,0:28:84.24:0,84,1291	0/0:16,0:16:45.15:0,45,716	0/0:19,0:16:48.15:0,48,726	0/0:31,0:31:93.30:0,93,1462	0/0:36,0:35:90.23:0,90,1385	0/0:9,0:9:27.09:0,27,431	0/0:20,0:20:60.19:0,60,933	0/0:29,0:29:87.30:0,87,1389	0/0:21,0:21:63.20:0,63,985	0/0:23,0:23:63.16:0,63,949	0/0:26,0:26:60.12:0,60,829	0/0:6,0:6:18.06:0,18,287
chr10	100188766	.	C	CT	1864.94	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.647;DP=694;FS=2.751;HRun=0;HaplotypeScore=66.0572;InbreedingCoeff=0.9997;MQ=68.17;MQ0=0;MQRankSum=-4.250;QD=39.68;ReadPosRankSum=1.575;VQSLOD=4.3249;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,45:47:99:1960,126,0	0/0:14,0:14:42.14:0,42,587	0/0:16,0:15:42.11:0,42,557	0/0:26,0:22:56.13:0,56,706	0/0:25,0:25:75.25:0,75,1041	0/0:17,0:17:51.15:0,51,680	0/0:24,0:24:72.16:0,72,934	0/0:31,0:31:81.25:0,81,1088	0/0:26,0:26:78.25:0,78,1073	0/0:33,0:33:96.31:0,96,1321	0/0:21,0:21:60.12:0,60,754	0/0:21,0:21:63.21:0,63,881	0/0:12,0:12:33.10:0,33,441	0/0:24,0:24:72.23:0,72,992	0/0:35,0:35:99:0,105,1400	0/0:21,0:20:63.20:0,63,865	0/0:31,0:31:90.26:0,90,1220	0/0:18,0:18:45.92:0,46,586	0/0:18,0:18:54.18:0,54,754	0/0:20,0:20:60.19:0,60,822	0/0:25,0:25:75.21:0,75,996	0/0:30,0:30:90.21:0,90,1184	0/0:29,0:29:84.26:0,84,1143	0/0:35,0:35:99:0,105,1411	0/0:20,0:20:60.19:0,60,823	0/0:26,0:26:78.26:0,78,1088	0/0:31,0:31:90.27:0,90,1209	0/0:18,0:18:50.83:0,51,666
chr10	100189300	.	TC	T	517.29	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.646;DP=621;FS=9.649;HRun=7;HaplotypeScore=58.9496;InbreedingCoeff=0.9910;MQ=75.27;MQ0=1;MQRankSum=-1.067;QD=19.90;ReadPosRankSum=3.561;VQSLOD=2.7091;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:26:60.14:612,60,0	0/0:13,0:13:39.12:0,39,490	0/0:15,0:15:30.10:0,30,377	0/0:13,0:12:24.06:0,24,278	0/0:24,0:24:66.15:0,66,788	0/0:21,0:21:63.18:0,63,768	0/0:10,0:10:24.08:0,24,302	0/0:45,0:45:99:0,108,1288	0/0:22,0:22:57.17:0,57,703	0/0:32,0:32:81.25:0,81,1008	0/0:24,0:24:57.18:0,57,717	0/0:28,0:28:78.24:0,78,970	0/0:23,0:23:69.18:0,69,826	0/0:22,0:22:63.20:0,63,787	0/0:13,0:13:33.11:0,33,415	0/0:22,0:22:60.17:0,60,732	0/0:18,0:17:42.13:0,42,527	0/0:11,0:11:21.02:0,21,246	0/0:29,0:29:75.22:0,75,914	0/0:40,0:40:99:0,111,1349	0/0:15,0:15:42.09:0,42,499	0/0:30,0:30:87.26:0,87,1070	0/0:21,0:21:54.17:0,54,679	0/0:16,0:16:45.14:0,45,566	0/0:23,0:23:60.19:0,60,754	0/0:22,0:22:60.17:0,60,717	0/0:24,0:24:69.21:0,69,855	0/0:19,0:19:57.12:0,57,684
chr10	100190348	.	C	CT	1552.24	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=-9.165;DP=656;FS=3.032;HRun=3;HaplotypeScore=83.2136;InbreedingCoeff=0.1238;MQ=74.86;MQ0=0;MQRankSum=-3.949;QD=8.44;ReadPosRankSum=-4.272;VQSLOD=-0.5350;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:41:99:1489,108,0	0/0:15,0:15:45.11:0,45,517	0/0:11,0:11:30.06:0,30,344	0/0:13,0:14:18.60:0,19,341	0/0:24,0:24:66.15:0,66,745	0/0:23,0:23:24:0,24,127	0/1:23,0:23:43.65:65,0,44	0/0:43,0:43:21.10:0,21,99	0/1:24,0:24:43.36:43,0,69	0/0:28,0:28:78.23:0,78,927	0/0:27,0:27:78.20:0,78,897	0/0:17,0:17:36.11:0,36,431	0/0:34,0:34:96.26:0,96,1123	0/0:24,0:24:69.21:0,69,824	0/0:26,0:26:78.23:0,78,923	0/1:21,0:21:11.30:11,0,61	0/0:25,0:25:66.19:0,66,777	0/0:11,0:11:20.25:0,20,65	0/1:25,0:25:20.12:20,0,48	0/1:24,0:24:23.04:23,0,78	0/0:29,0:29:30.01:0,30,133	0/0:27,0:27:77.32:0,77,922	0/0:23,0:23:63.13:0,63,705	0/0:26,0:26:72.20:0,72,840	0/0:16,0:15:47.98:0,48,547	0/1:26,0:26:40.99:41,0,54	0/0:28,0:28:5.61:0,6,106	0/0:1,0:1:1.82:0,2,5
chr10	100192696	.	CGTGAGT	C	536.44	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.389;DP=603;FS=0.000;HRun=0;HaplotypeScore=129.1987;InbreedingCoeff=0.9973;MQ=85.07;MQ0=0;MQRankSum=-5.381;QD=53.64;ReadPosRankSum=-0.566;VQSLOD=3.4803;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:30.05:631,30,0	0/0:16,0:16:48.16:0,48,1743	0/0:16,0:16:48.16:0,48,1568	0/0:21,0:21:60.21:0,60,2116	0/0:42,0:42:99:0,123,4290	0/0:25,0:25:75.26:0,75,2807	0/0:16,0:16:48.16:0,48,1747	0/0:25,0:25:72.25:0,72,2605	0/0:21,0:21:63.22:0,63,2272	0/0:31,0:31:93.32:0,93,3447	0/0:21,0:21:60.21:0,60,2258	0/0:18,0:18:54.19:0,54,2031	0/0:23,0:23:69.24:0,69,2509	0/0:25,0:25:75.26:0,75,2674	0/0:28,0:28:84.29:0,84,3124	0/0:15,0:15:45.15:0,45,1693	0/0:14,0:14:42.14:0,42,1580	0/0:8,0:8:24.08:0,24,903	0/0:18,0:18:54.19:0,54,2030	0/0:36,0:36:99:0,105,3629	0/0:23,0:23:69.24:0,69,2516	0/0:19,0:19:57.20:0,57,2010	0/0:18,0:18:54.12:0,54,1788	0/0:23,0:23:69.24:0,69,2542	0/0:24,0:24:72.25:0,72,2669	0/0:24,0:24:72.25:0,72,2695	0/0:31,0:31:93.32:0,93,3250	0/0:12,0:12:36.12:0,36,1333
chr10	100198902	.	G	GT	148.05	PASS	AC=8;AF=1.00;AN=8;DP=360;FS=0.000;HRun=4;HaplotypeScore=9.0792;MQ=4.24;MQ0=337;QD=3.80;VQSLOD=-0.5982;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,3:2:6.02:85,6,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:7,3:1:3.01:34,3,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:1,2:1:3.01:48,3,0	./.	./.	./.	./.	./.	1/1:19,3:1:3.01:48,3,0	./.	./.
chr10	100203596	.	GA	G	4268.42	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=13.362;DP=458;FS=4.767;HRun=10;HaplotypeScore=65.9832;InbreedingCoeff=0.9784;MQ=74.42;MQ0=0;MQRankSum=0.760;QD=19.06;ReadPosRankSum=0.426;VQSLOD=5.7759;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:17:38.96:338,39,0	0/0:3,0:3:9.02:0,9,99	0/0:10,0:10:15.04:0,15,163	0/0:17,0:16:20.55:0,21,201	0/0:26,1:27:43.13:0,43,704	1/1:2,11:13:26.99:234,27,0	1/1:0,8:8:24:208,24,0	1/1:6,26:32:71.81:613,72,0	1/1:1,15:16:29.99:260,30,0	0/0:22,0:22:54.14:0,54,596	0/0:30,0:32:74.79:0,75,764	0/0:13,0:13:24.06:0,24,266	0/0:11,0:11:27.06:0,27,287	0/0:20,0:20:54.13:0,54,587	0/0:9,0:9:21.06:0,21,232	1/1:2,10:12:20.99:182,21,0	0/0:19,0:18:45.12:0,45,498	1/1:2,10:12:26.93:227,27,0	1/1:4,16:20:47.99:416,48,0	1/1:2,23:25:62.97:547,63,0	1/1:3,10:12:29.99:260,30,0	0/0:14,0:14:39.10:0,39,424	0/0:12,1:14:15.92:0,16,373	0/0:6,0:6:15.04:0,15,166	0/0:17,0:17:33.07:0,33,354	1/1:3,19:22:26.80:461,27,0	1/1:2,23:25:47.97:417,48,0	1/1:4,5:9:11.92:104,12,0
chr10	100204186	.	CT	C	3583.45	PASS	AB=0.911;AC=27;AF=0.482;AN=56;BaseQRankSum=4.906;DP=528;FS=3.868;HRun=12;HaplotypeScore=64.6194;InbreedingCoeff=0.7869;MQ=76.65;MQ0=1;MQRankSum=-2.625;QD=12.15;ReadPosRankSum=1.795;VQSLOD=3.6871;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:19:31.86:0,32,168	0/1:6,1:7:5.12:5,0,134	0/1:21,1:17:4.46:4,0,49	0/0:11,0:10:2.91:0,3,39	0/0:28,0:28:60.11:0,60,602	1/1:3,17:20:47.78:371,48,0	1/1:2,12:14:32.87:256,33,0	1/1:3,14:18:37.87:282,38,0	1/1:5,16:23:12.94:261,13,0	0/1:24,3:27:0.01:0,0,487	0/0:19,0:23:44.96:0,45,424	0/0:15,0:15:18.52:0,19,333	0/0:22,1:24:33.69:0,34,497	0/0:17,0:17:41.66:0,42,388	0/0:15,0:15:30.05:0,30,299	1/1:2,11:14:31.90:238,32,0	0/0:12,1:16:15.65:0,16,315	1/1:4,9:14:22.95:168,23,0	1/1:7,5:14:18.96:126,19,0	1/1:3,23:27:56.81:499,57,0	1/1:5,6:11:14.43:115,14,0	0/0:18,2:20:2.50:0,3,370	0/0:14,0:14:33.02:0,33,313	0/0:10,0:10:21.04:0,21,213	0/0:20,1:21:9.18:0,9,426	1/1:11,14:26:17.69:278,18,0	1/1:5,32:39:60.53:631,61,0	1/1:3,16:19:44.82:348,45,0
chr10	100205145	.	CA	C	3124.47	PASS	AB=0.770;AC=25;AF=0.446;AN=56;BaseQRankSum=9.141;DP=507;FS=7.368;HRun=12;HaplotypeScore=57.3004;InbreedingCoeff=0.7747;MQ=74.72;MQ0=0;MQRankSum=-0.863;QD=13.70;ReadPosRankSum=0.395;VQSLOD=3.7004;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:21.85:0,22,200	0/0:11,0:12:29.89:0,30,288	0/1:11,2:11:4.26:4,0,69	0/0:12,0:9:4.92:0,5,70	0/0:34,2:38:43.32:0,43,750	1/1:3,13:18:39.93:290,40,0	1/1:3,7:11:22.93:168,23,0	1/1:6,14:20:38.81:301,39,0	1/1:3,5:8:14.92:116,15,0	0/0:27,0:31:80.62:0,81,752	0/0:29,1:30:48.90:0,49,672	0/0:8,0:10:23.88:0,24,227	0/0:11,0:11:33.06:0,33,327	0/0:15,0:15:27.01:0,27,259	0/0:17,0:17:42.06:0,42,410	1/1:3,12:16:34.91:261,35,0	0/0:17,0:17:36.07:0,36,365	1/1:2,10:13:8.41:171,8,0	1/1:3,17:20:50.79:395,51,0	1/1:6,29:35:59.06:643,59,0	1/1:0,10:10:17.93:139,18,0	0/0:23,0:23:50.53:0,51,530	0/0:21,1:25:39.56:0,40,553	0/1:4,1:5:14.22:14,0,52	0/0:25,0:26:74.98:0,75,745	1/1:10,21:31:7.81:423,8,0	1/1:2,13:17:39.93:290,40,0	0/1:4,6:11:7.31:123,0,7
chr10	100206091	.	AGCGGAGTGGGTTAGACAT	A	2360.96	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.125;DP=569;FS=6.026;HRun=0;HaplotypeScore=283.0521;InbreedingCoeff=0.9982;MQ=96.38;MQ0=0;MQRankSum=-5.650;QD=112.43;ReadPosRankSum=-0.098;VQSLOD=2.5701;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:48.16:2456,48,0	0/0:10,0:10:27.09:0,27,2166	0/0:24,0:24:63.67:0,64,3745	0/0:31,0:31:80.97:0,81,4887	0/0:27,0:27:81.28:0,81,6660	0/0:16,0:16:45.14:0,45,3194	0/0:21,0:21:63.22:0,63,4727	0/0:42,0:42:99:0,123,8678	0/0:24,0:24:48.24:0,48,4938	0/0:23,0:23:69.24:0,69,5386	0/0:14,0:14:42.14:0,42,3371	0/0:15,0:15:45.15:0,45,3986	0/0:15,0:15:45.15:0,45,3946	0/0:26,0:26:78.27:0,78,6385	0/0:17,0:17:51.17:0,51,4087	0/0:16,0:16:48.16:0,48,3694	0/0:25,0:25:75.26:0,75,6645	0/0:16,0:16:45.14:0,45,3087	0/0:18,0:18:54.19:0,54,4117	0/0:23,0:23:66.21:0,66,5190	0/0:23,0:23:42.23:0,42,4482	0/0:19,0:19:57.20:0,57,4787	0/0:15,0:15:42.14:0,42,3287	0/0:23,0:23:69.24:0,69,5842	0/0:13,0:13:36.12:0,36,2866	0/0:18,0:18:54.19:0,54,3704	0/0:24,0:24:72.23:0,72,5287	0/0:10,0:10:30.10:0,30,2244
chr10	100206340	.	AT	A	2737.58	PASS	AB=0.922;AC=23;AF=0.411;AN=56;BaseQRankSum=10.400;DP=538;FS=6.638;HRun=13;HaplotypeScore=78.9381;InbreedingCoeff=0.6968;MQ=72.83;MQ0=0;MQRankSum=0.307;QD=10.69;ReadPosRankSum=3.066;VQSLOD=3.3270;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:32:36.17:0,36,160	0/0:13,0:13:29.89:0,30,267	0/1:15,1:11:4.08:4,0,95	0/1:17,0:17:0.18:0,0,6	0/1:16,3:23:6.26:6,0,372	1/1:0,15:15:38.78:284,39,0	1/1:2,17:19:44.66:328,45,0	1/1:6,17:23:50.56:371,51,0	1/1:5,20:25:53.52:393,54,0	0/0:22,0:22:48.07:0,48,460	0/0:15,0:15:27.04:0,27,259	0/0:15,2:18:19.87:0,20,316	0/1:21,5:26:48.22:48,0,363	0/0:17,0:17:27.04:0,27,258	0/1:10,0:10:2.01:2,0,121	1/1:1,10:11:26.84:197,27,0	0/0:21,1:24:22.47:0,22,487	1/1:2,18:20:44.72:328,45,0	0/0:15,0:16:38.88:0,39,352	0/0:26,3:29:4.58:0,5,511	1/1:2,10:12:32.76:239,33,0	0/0:22,0:26:36.55:0,37,464	0/0:15,2:21:9.58:0,10,346	0/0:17,1:18:26.13:0,26,399	0/0:13,1:15:10.34:0,10,234	1/1:0,25:25:74.56:545,75,0	0/0:16,0:16:36.90:0,37,335	1/1:2,11:13:26.76:197,27,0
chr10	100206770	.	A	AT	4880.73	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-13.559;DP=600;FS=1.120;HRun=9;HaplotypeScore=57.4078;InbreedingCoeff=0.9917;MQ=79.62;MQ0=0;MQRankSum=-0.566;QD=24.53;ReadPosRankSum=0.038;VQSLOD=5.5028;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,16:20:45.12:496,45,0	0/0:7,0:7:21:0,21,182	0/0:19,1:20:19.31:0,19,271	0/0:15,0:15:12.37:0,12,158	0/0:29,1:32:57.87:0,58,708	1/1:9,18:27:28.09:538,28,0	1/1:2,15:18:15.91:385,16,0	1/1:7,25:33:54.99:802,55,0	1/1:1,17:18:51.14:564,51,0	0/0:22,0:22:53.96:0,54,469	0/0:28,0:28:74.98:0,75,651	0/0:18,0:18:44.99:0,45,391	0/0:15,0:15:38.99:0,39,339	0/0:17,0:17:35.93:0,36,308	0/0:22,0:22:62.98:0,63,547	1/1:1,9:10:27.07:299,27,0	0/0:19,0:19:51.46:0,51,443	1/1:1,14:16:35.93:379,36,0	0/0:21,0:21:53.97:0,54,466	0/0:25,0:25:74.97:0,75,647	1/1:2,12:14:27.07:299,27,0	0/0:33,0:33:92.94:0,93,799	0/0:36,0:36:99:0,102,885	0/0:17,0:17:44.98:0,45,391	0/0:21,0:21:50.96:0,51,438	1/1:5,25:30:75.19:821,75,0	0/0:33,0:33:95.96:0,96,829	1/1:1,12:13:27.07:299,27,0
chr10	100207057	.	G	GA	5027.06	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=0.442;DP=554;FS=3.662;HRun=8;HaplotypeScore=64.2987;InbreedingCoeff=0.9944;MQ=77.65;MQ0=0;MQRankSum=-6.604;QD=27.62;ReadPosRankSum=-0.856;VQSLOD=5.2364;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:31:39.98:703,40,0	0/0:13,0:13:35.99:0,36,323	0/0:20,0:20:26.79:0,27,226	0/0:8,0:7:12.01:0,12,109	0/0:25,0:25:69.04:0,69,632	1/1:6,19:25:63.18:718,63,0	1/1:1,11:12:33.10:382,33,0	1/1:10,18:27:54.14:612,54,0	1/1:2,17:20:53.99:603,54,0	0/0:31,0:31:81:0,81,734	0/0:25,0:25:56.99:0,57,517	0/0:11,0:11:33.02:0,33,302	0/0:17,0:17:45:0,45,406	0/0:14,0:14:36.01:0,36,330	0/0:13,0:14:38.04:0,38,331	1/1:0,8:8:24.07:277,24,0	0/0:28,0:28:75.01:0,75,680	1/1:0,9:9:27.08:311,27,0	0/0:14,0:14:42:0,42,379	0/0:34,0:34:90.03:0,90,819	1/1:2,11:13:36.09:404,36,0	0/0:28,0:28:75.04:0,75,686	0/0:31,0:32:86.06:0,86,770	0/0:12,0:12:33.01:0,33,302	0/0:18,0:19:53.06:0,53,473	1/1:4,17:22:26.52:541,27,0	0/0:27,0:27:81:0,81,729	1/1:1,13:14:42.11:475,42,0
chr10	100207110	.	G	GGT	8114.11	PASS	AB=0.600;AC=17;AF=0.304;AN=56;BaseQRankSum=-5.233;DP=530;FS=15.872;HRun=0;HaplotypeScore=70.5889;InbreedingCoeff=0.9361;MQ=76.97;MQ0=0;MQRankSum=-2.290;QD=50.71;ReadPosRankSum=-2.853;VQSLOD=3.5508;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.20:0,87,1258	0/0:4,0:4:12.04:0,12,194	0/0:17,0:17:27.99:0,28,474	0/0:15,0:14:35.12:0,35,419	0/0:30,0:30:90.26:0,90,1385	1/1:4,20:24:69.13:1226,69,0	1/1:2,13:15:45.13:829,45,0	1/1:0,30:30:90.23:1575,90,0	1/1:4,20:24:69.13:1256,69,0	0/0:20,0:20:60.18:0,60,910	0/0:18,0:18:54.18:0,54,870	0/0:14,0:14:39.10:0,39,606	0/0:10,0:10:27.05:0,27,407	0/0:11,0:11:33.07:0,33,484	0/0:16,0:16:48.10:0,48,683	1/1:2,9:11:30.08:534,30,0	0/0:36,0:36:99:0,105,1654	1/1:0,11:12:27.02:504,27,0	0/0:16,0:16:48.14:0,48,730	0/0:31,0:31:69.67:0,70,1378	1/1:2,12:14:36.09:651,36,0	0/0:24,0:24:69.19:0,69,1034	0/0:22,0:22:66.23:0,66,1070	0/0:17,0:17:48.07:0,48,700	0/0:16,0:16:44.99:0,45,626	0/1:5,10:15:3.66:676,0,4	0/0:23,0:22:66.19:0,66,1006	1/1:1,14:15:45.09:862,45,0
chr10	100207871	.	C	CT	2962.13	PASS	AB=0.847;AC=20;AF=0.357;AN=56;BaseQRankSum=-9.027;DP=508;FS=2.968;HRun=11;HaplotypeScore=57.9297;InbreedingCoeff=0.7167;MQ=73.26;MQ0=0;MQRankSum=0.446;QD=14.31;ReadPosRankSum=-0.798;VQSLOD=3.7450;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,1:19:20.35:0,20,341	0/0:9,0:9:20.91:0,21,163	0/0:11,0:11:11.21:0,11,90	0/0:8,0:9:5.75:0,6,67	0/0:31,1:35:53.37:0,53,567	1/1:4,17:23:35.07:374,35,0	1/1:1,6:7:18.04:183,18,0	1/1:6,12:19:35.75:324,36,0	1/1:8,12:21:31.94:464,32,0	0/0:27,0:27:56.76:0,57,441	0/0:12,1:13:23.85:0,24,186	0/1:9,1:10:2.65:3,0,160	0/0:9,0:9:20.90:0,21,162	0/0:12,0:12:20.85:0,21,162	0/0:19,0:19:35.82:0,36,279	1/1:4,8:13:9.86:260,10,0	0/0:19,0:18:38.82:0,39,302	1/1:7,7:14:30.73:273,31,0	0/0:19,0:20:37.81:0,38,279	0/0:31,0:32:76.69:0,77,586	0/1:7,10:17:16.42:214,0,16	0/0:19,0:19:41.80:0,42,325	0/1:20,2:23:5.06:5,0,321	0/0:16,1:17:14.38:0,14,295	0/1:11,1:13:4.53:5,0,142	1/1:8,16:24:54.10:543,54,0	0/0:31,0:31:71.67:0,72,557	1/1:2,21:23:51.10:518,51,0
chr10	100207966	.	T	TG	4020.80	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.597;DP=539;FS=4.297;HRun=3;HaplotypeScore=71.2850;InbreedingCoeff=0.9795;MQ=70.06;MQ0=3;MQRankSum=0.588;QD=23.79;ReadPosRankSum=-0.211;VQSLOD=2.8442;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:80.83:0,81,872	0/0:12,0:12:36.08:0,36,416	0/0:27,0:24:59.47:0,59,597	0/0:12,0:7:14.92:0,15,140	0/0:28,0:28:77.05:0,77,931	1/1:19,0:19:32.88:293,33,0	1/1:13,0:13:27:241,27,0	1/1:34,1:35:89.83:788,90,0	1/1:18,0:18:45.02:407,45,0	0/0:27,0:27:78.22:0,78,908	0/0:26,0:26:78.19:0,78,884	0/0:10,0:10:30.08:0,30,350	0/0:2,0:2:6.02:0,6,72	0/0:14,0:14:39.05:0,39,419	0/0:14,0:14:33.09:0,33,384	1/1:0,15:15:42.14:583,42,0	0/0:17,0:17:45.05:0,45,476	1/1:16,1:17:45:413,45,0	0/0:23,0:23:69.16:0,69,776	0/0:28,0:28:84.18:0,84,957	1/1:7,0:7:18.01:164,18,0	0/0:18,0:18:51.14:0,51,591	0/0:34,0:34:77.28:0,77,1083	0/0:15,0:15:42.02:0,42,440	0/0:22,0:22:66.06:0,66,745	1/1:20,0:20:53.94:459,54,0	0/0:13,0:13:39.10:0,39,445	1/1:25,0:25:75.02:672,75,0
chr10	100207969	.	G	GGT	7488.70	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=2.968;DP=546;FS=3.662;HRun=0;HaplotypeScore=71.0748;InbreedingCoeff=0.9867;MQ=72.32;MQ0=3;MQRankSum=-2.243;QD=45.66;ReadPosRankSum=0.279;VQSLOD=5.8627;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:83.23:0,83,1208	0/0:12,0:12:36.12:0,36,574	0/0:32,0:29:58.66:0,59,787	0/0:11,0:6:14.92:0,15,182	0/0:28,0:29:82.48:0,82,1261	1/1:0,16:17:33.03:658,33,0	1/1:0,11:14:27.09:540,27,0	1/1:1,27:31:93.15:1613,93,0	1/1:0,18:18:45.15:905,45,0	0/0:27,0:27:78.24:0,78,1217	0/0:27,0:27:81.03:0,81,1194	0/0:10,0:10:30.09:0,30,462	0/0:3,0:3:9:0,9,119	0/0:12,0:13:39.12:0,39,581	0/0:11,0:11:33.11:0,33,531	1/1:15,0:15:40.64:219,41,0	0/0:16,0:17:48.11:0,48,672	1/1:1,14:16:45.05:832,45,0	0/0:24,0:24:72.19:0,72,1062	0/0:30,0:30:90.25:0,90,1361	1/1:0,6:6:18.06:363,18,0	0/0:17,0:17:51.16:0,51,775	0/0:34,0:34:99:0,100,1515	0/0:15,0:15:45.09:0,45,637	0/0:25,0:25:69.15:0,69,1021	1/1:1,18:19:54.10:890,54,0	0/0:15,0:15:45.07:0,45,623	1/1:5,23:28:75.24:1469,75,0
chr10	100208538	.	GTCTGTATATAGGATGA	G	2187.76	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.976;DP=584;FS=3.152;HRun=0;HaplotypeScore=235.2868;InbreedingCoeff=0.9983;MQ=59.62;MQ0=1;MQRankSum=-6.895;QD=66.30;ReadPosRankSum=0.181;VQSLOD=3.2767;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:33:54.19:2283,54,0	0/0:14,0:14:42.13:0,42,2823	0/0:31,0:21:60.20:0,60,4090	0/0:29,0:25:69.19:0,69,3812	0/0:22,0:22:63.22:0,63,4585	0/0:26,0:26:78.27:0,78,5770	0/0:12,0:12:33.11:0,33,2436	0/0:27,0:26:69.23:0,69,4691	0/0:20,0:20:56.86:0,57,3921	0/0:29,0:29:84.29:0,84,6192	0/0:12,0:12:36.12:0,36,2561	0/0:20,0:20:60.21:0,60,4253	0/0:15,0:15:45.15:0,45,3295	0/0:18,0:18:51.17:0,51,3680	0/0:20,0:20:60.21:0,60,4416	0/0:9,0:9:27.08:0,27,1706	0/0:14,0:14:39.13:0,39,2920	0/0:19,0:19:54.19:0,54,3727	0/0:21,0:20:60.21:0,60,4128	0/0:15,0:15:45.15:0,45,3131	0/0:37,0:37:99:0,105,7926	0/0:15,0:15:42.14:0,42,3088	0/0:20,0:20:57.20:0,57,4056	0/0:25,0:25:69.22:0,69,4510	0/0:20,0:20:54.19:0,54,3792	0/0:25,0:25:75.26:0,75,5373	0/0:23,0:23:69.24:0,69,5073	0/0:13,0:13:36.12:0,36,2654
chr10	100211515	.	G	GT	2309.23	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.036;DP=551;FS=7.683;HRun=3;HaplotypeScore=75.5649;InbreedingCoeff=0.9252;MQ=57.07;MQ0=5;MQRankSum=-3.827;QD=16.15;ReadPosRankSum=-0.470;VQSLOD=2.6310;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:51.15:0,51,605	0/0:17,0:17:45.14:0,45,535	0/0:32,0:25:47.32:0,47,546	0/0:14,0:11:21.06:0,21,249	0/0:33,0:33:87.25:0,87,1021	1/1:3,7:11:17.84:181,18,0	1/1:4,10:13:13.08:257,13,0	1/1:12,11:19:8.61:367,9,0	1/1:5,11:15:2.92:243,3,0	0/0:27,0:27:75.20:0,75,877	0/0:29,0:29:80.46:0,80,939	0/0:14,0:14:36.11:0,36,429	0/0:13,0:13:33.10:0,33,391	0/0:18,0:18:42.13:0,42,503	0/0:15,0:15:36.11:0,36,424	1/1:2,12:15:29.83:305,30,0	0/0:12,0:12:27.08:0,27,324	1/1:4,3:7:5.06:65,5,0	0/0:23,0:21:57.17:0,57,684	0/0:36,0:36:99:0,99,1183	1/1:5,10:15:9.15:223,9,0	0/0:20,0:20:51.14:0,51,599	0/0:20,0:20:54.16:0,54,633	0/0:26,0:25:72.22:0,72,861	0/0:12,0:12:27.08:0,27,324	1/1:7,20:26:61.10:670,61,0	0/0:24,0:24:66.20:0,66,781	1/1:3,10:15:21.47:198,21,0
chr10	100213045	.	GT	G	4818.55	PASS	AB=0.533;AC=17;AF=0.304;AN=56;BaseQRankSum=14.936;DP=566;FS=7.696;HRun=5;HaplotypeScore=66.7541;InbreedingCoeff=0.9165;MQ=59.94;MQ0=3;MQRankSum=3.760;QD=29.20;ReadPosRankSum=-1.655;VQSLOD=4.5707;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.21:0,93,1181	0/0:9,0:9:27.09:0,27,369	0/0:19,0:15:42.12:0,42,556	0/0:26,0:18:50.84:0,51,648	0/0:35,0:35:99:0,102,1346	1/1:1,22:23:60.17:680,60,0	1/1:1,17:18:42.12:476,42,0	1/1:1,17:18:51.13:568,51,0	1/1:1,13:14:36.10:408,36,0	0/0:31,0:31:93.28:0,93,1199	0/0:22,0:22:63.20:0,63,847	0/0:13,0:13:36.11:0,36,475	0/0:19,0:19:57.19:0,57,779	0/0:17,0:17:42.14:0,42,573	0/0:17,0:17:48.16:0,48,655	1/1:0,15:15:45.13:510,45,0	0/0:18,0:18:47.88:0,48,610	1/1:1,12:13:33.09:374,33,0	0/0:17,0:15:36.12:0,36,492	0/0:24,0:24:72.23:0,72,969	1/1:1,20:21:57.16:646,57,0	0/0:16,0:16:48.16:0,48,655	0/0:23,0:23:63.19:0,63,828	0/0:12,0:12:36.10:0,36,474	0/0:15,0:15:45.14:0,45,600	0/1:4,28:32:17.60:850,0,18	0/0:34,0:34:96.32:0,96,1311	1/1:0,11:11:27.08:306,27,0
chr10	100214089	.	G	GT	522.07	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.001;DP=551;FS=4.613;HRun=8;HaplotypeScore=56.7225;InbreedingCoeff=0.9799;MQ=63.94;MQ0=0;MQRankSum=-1.593;QD=22.70;ReadPosRankSum=1.012;VQSLOD=4.3017;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:23:50.11:617,50,0	0/0:9,0:9:21.01:0,21,192	0/0:12,0:10:17.88:0,18,146	0/0:13,0:13:26.96:0,27,235	0/0:34,0:34:96.05:0,96,879	0/0:19,0:19:51.01:0,51,462	0/0:18,0:18:48.02:0,48,439	0/0:27,0:27:72.03:0,72,659	0/0:13,0:13:36.02:0,36,330	0/0:31,0:31:78.03:0,78,711	0/0:25,0:25:69.04:0,69,632	0/0:12,0:12:36.02:0,36,330	0/0:10,0:10:24.01:0,24,220	0/0:18,0:18:48.03:0,48,439	0/0:16,0:16:45.02:0,45,412	0/0:11,0:11:30.02:0,30,275	0/0:22,0:23:54.02:0,54,494	0/0:18,0:19:47.04:0,47,418	0/0:22,0:22:51.02:0,51,467	0/0:25,0:25:69.03:0,69,632	0/0:17,0:17:45.02:0,45,412	0/0:20,0:20:57.03:0,57,522	0/0:33,0:33:93.03:0,93,846	0/0:14,0:14:39.02:0,39,356	0/0:10,0:10:21:0,21,192	0/0:25,0:25:57:0,57,517	0/0:37,0:37:99:0,108,987	0/0:15,0:15:42.02:0,42,384
chr10	100214817	.	TTG	T	211.02	PASS	AB=0.993;AC=18;AF=0.360;AN=50;BaseQRankSum=1.390;DP=482;FS=3.321;HRun=0;HaplotypeScore=62.7182;InbreedingCoeff=0.2969;MQ=56.23;MQ0=2;MQRankSum=1.582;QD=1.00;ReadPosRankSum=0.710;VQSLOD=1.4894;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:19:3.73:16,4,0	1/1:7,0:7:5.82:35,6,0	./.	./.	1/1:20,0:22:8.80:63,9,0	0/0:13,0:17:2.99:0,3,26	0/0:9,0:11:8.98:0,9,72	./.	0/0:17,0:21:6:0,6,52	0/1:21,0:20:10.36:10,0,78	0/0:17,0:17:20.85:0,21,224	1/1:8,0:8:2.92:17,3,0	0/1:12,0:12:8.67:9,0,36	0/0:8,0:8:8.82:0,9,101	0/1:18,0:17:17.05:17,0,159	0/0:14,0:11:15:0,15,153	0/0:17,0:17:15.01:0,15,190	0/0:9,0:9:6.86:0,7,59	0/1:16,0:15:6.85:7,0,97	0/1:21,1:22:5.24:5,0,235	0/0:22,0:22:17.99:0,18,174	0/0:12,0:12:10.04:0,10,67	1/1:17,3:20:6.02:64,6,0	1/1:13,9:23:11.86:110,12,0	0/0:17,0:17:15.01:0,15,182	0/0:15,0:15:8.93:0,9,78	0/1:21,0:20:13.79:14,0,127	0/0:6,0:6:5.92:0,6,39
chr10	100215015	.	T	TC	891.88	PASS	AB=0.967;AC=16;AF=0.286;AN=56;BaseQRankSum=11.744;DP=552;FS=5.338;HRun=0;HaplotypeScore=69.2219;InbreedingCoeff=0.8496;MQ=57.25;MQ0=8;MQRankSum=1.702;QD=5.79;ReadPosRankSum=-0.637;VQSLOD=2.6293;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:68.86:0,69,911	0/0:15,0:15:45.14:0,45,614	0/0:24,0:17:51.07:0,51,628	0/0:18,0:14:33.11:0,33,449	0/0:34,0:34:96.29:0,96,1294	1/1:16,0:16:22.29:148,22,0	0/0:12,1:10:3.69:0,4,9	0/1:16,0:9:0.27:14,0,0	1/1:20,0:19:30:160,30,0	0/0:23,0:23:60.19:0,60,819	0/0:26,0:26:78.22:0,78,1028	0/0:8,0:8:24.08:0,24,334	0/0:10,0:10:30.09:0,30,404	0/0:12,0:12:36.11:0,36,488	0/0:14,0:13:36.12:0,36,503	1/1:20,0:18:37.74:192,38,0	0/0:34,2:36:77.07:0,77,1354	1/1:19,0:19:36.22:183,36,0	0/0:18,0:18:54.16:0,54,707	0/0:23,0:23:69.16:0,69,892	1/1:16,0:16:35.02:153,35,0	0/0:12,0:12:36.12:0,36,503	0/0:32,0:32:96.28:0,96,1283	0/1:13,1:14:3.72:4,0,487	0/0:24,0:24:69.22:0,69,935	1/1:20,0:20:7.81:175,8,0	0/0:31,0:31:90.30:0,90,1258	1/1:13,0:13:9.33:56,9,0
chr10	100215310	.	T	TGGTTTCTGTTGCTGA	20383.95	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-6.901;DP=625;FS=1.266;HRun=0;HaplotypeScore=216.6077;InbreedingCoeff=0.9946;MQ=55.21;MQ0=4;MQRankSum=-14.514;QD=112.00;ReadPosRankSum=-0.848;VQSLOD=4.6984;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,135,5552	0/0:10,0:10:30.10:0,30,1125	0/0:27,0:20:54.09:0,54,1416	0/0:21,0:18:45.14:0,45,1538	0/0:28,0:28:81.23:0,81,3117	1/1:5,13:24:48.16:3326,48,0	1/1:8,6:20:27.09:1667,27,0	1/1:15,3:28:66.09:2327,66,0	1/1:5,12:27:48.16:3462,48,0	0/0:21,0:21:57.20:0,57,2521	0/0:17,0:17:48.16:0,48,2049	0/0:13,0:13:39.09:0,39,1291	0/0:21,0:21:57.18:0,57,2146	0/0:17,0:17:45.15:0,45,1923	0/0:17,0:17:45.15:0,45,1879	1/1:3,8:21:27.09:2000,27,0	0/0:31,0:31:90.24:0,90,3799	1/1:3,4:12:18.06:1335,18,0	0/0:21,0:17:45.14:0,45,1529	0/0:22,0:22:57.20:0,57,2245	1/1:4,3:11:15.05:974,15,0	0/0:20,0:20:57.18:0,57,2222	0/0:35,0:35:99:0,105,3987	0/0:25,0:25:75.22:0,75,2986	0/0:21,0:21:54.17:0,54,2166	1/1:6,8:23:66.20:3960,66,0	0/0:27,0:27:72.23:0,72,2929	1/1:2,5:11:18.06:1334,18,0
chr10	100215501	.	T	TCAGTTCTCAGCGCAGGCAGGA	21317.99	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=5.941;DP=568;FS=13.092;HRun=0;HaplotypeScore=301.3287;InbreedingCoeff=0.9002;MQ=73.46;MQ0=0;MQRankSum=-14.141;QD=122.52;ReadPosRankSum=-3.362;VQSLOD=2.7126;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,99,4789	0/0:7,0:7:15.05:0,15,734	0/0:21,0:20:24.37:0,24,886	0/0:25,0:25:38.36:0,38,1321	0/0:19,0:19:45.13:0,45,1990	1/1:18,4:22:45.15:3357,45,0	1/1:18,0:18:45.15:2909,45,0	1/1:22,0:22:36.12:2113,36,0	1/1:25,4:29:54.19:4724,54,0	0/0:20,0:19:24.08:0,24,1235	0/0:12,0:12:20.85:0,21,866	0/0:17,0:17:39.13:0,39,1999	0/0:25,0:25:51.16:0,51,2590	0/0:21,0:21:51.18:0,51,2617	0/0:18,0:18:42.14:0,42,2266	1/1:13,4:17:36.12:2560,36,0	0/0:29,0:29:63.20:0,63,3120	1/1:7,1:8:12.04:864,12,0	0/0:26,0:25:48.16:0,48,2064	0/0:19,0:19:36.12:0,36,1696	1/1:25,0:25:19.17:1194,19,0	0/0:17,0:17:33.11:0,33,1640	0/0:14,0:14:33.10:0,33,1641	0/0:26,0:26:54.14:0,54,2319	0/0:14,0:14:30.10:0,30,1366	0/1:26,0:25:99:2651,0,292	0/0:24,0:24:60.21:0,60,2922	1/1:4,3:7:12.04:947,12,0
chr10	100215834	.	G	GGGCAGAAGT	15996.79	PASS	AB=0.641;AC=17;AF=0.304;AN=56;BaseQRankSum=-5.018;DP=610;FS=0.767;HRun=0;HaplotypeScore=150.8793;InbreedingCoeff=0.9157;MQ=56.68;MQ0=2;MQRankSum=-15.015;QD=75.46;ReadPosRankSum=-3.708;VQSLOD=4.2014;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,3382	0/0:9,0:9:24.08:0,24,699	0/0:17,0:16:45.15:0,45,1241	0/0:26,0:23:55.99:0,56,1353	0/0:20,0:20:54.19:0,54,1615	1/1:5,18:27:51.09:2183,51,0	1/1:7,10:16:21.07:1006,21,0	1/1:13,17:29:75.22:2988,75,0	1/1:5,15:20:60.21:2550,60,0	0/0:26,0:26:72.24:0,72,2093	0/0:16,0:16:42.14:0,42,1197	0/0:27,0:27:66.23:0,66,1963	0/0:15,0:15:39.10:0,39,1041	0/0:15,0:15:42.13:0,42,1147	0/0:16,0:16:48.15:0,48,1353	1/1:3,20:26:42.14:1878,42,0	0/0:32,0:32:90.27:0,90,2609	1/1:3,10:17:27.09:1124,27,0	0/0:30,0:28:69.23:0,69,1934	0/0:16,0:16:45.14:0,45,1281	1/1:15,10:31:36.34:860,36,0	0/0:19,0:19:54.17:0,54,1493	0/0:17,0:17:42.14:0,42,1238	0/0:17,0:16:45.08:0,45,1128	0/0:15,0:15:42.14:0,42,1215	0/1:11,10:21:17.87:1876,0,18	0/0:23,0:23:69.24:0,69,2052	1/1:11,4:15:42.14:1532,42,0
chr10	100215922	.	CT	C	3010.26	PASS	AB=0.744;AC=18;AF=0.321;AN=56;BaseQRankSum=6.578;DP=558;FS=1.665;HRun=11;HaplotypeScore=66.9924;InbreedingCoeff=0.8406;MQ=68.75;MQ0=0;MQRankSum=-3.991;QD=15.28;ReadPosRankSum=1.438;VQSLOD=4.3850;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:28:55.66:0,56,283	0/1:7,1:8:3.59:4,0,170	0/0:21,1:21:7.78:0,8,312	0/0:18,0:17:23.88:0,24,225	0/0:25,0:26:63.88:0,64,655	0/1:7,14:21:6.75:315,0,7	1/1:2,8:10:14.98:123,15,0	1/1:12,22:35:54.85:467,55,0	1/1:3,23:26:65.91:542,66,0	0/0:25,1:27:41.35:0,41,628	0/0:17,0:17:37.34:0,37,385	0/0:17,0:17:39.10:0,39,416	0/0:12,0:12:33.08:0,33,352	0/0:24,0:24:60.07:0,60,604	0/0:13,0:13:33.05:0,33,340	1/1:5,12:17:35.96:296,36,0	0/0:17,0:17:39.07:0,39,401	1/1:4,11:15:32.96:271,33,0	0/0:26,0:26:62.99:0,63,654	0/0:28,0:28:72.65:0,73,769	1/1:8,17:25:47.89:389,48,0	0/0:14,1:15:14.46:0,14,353	0/0:13,1:14:8.43:0,8,288	0/0:16,1:17:20.45:0,20,410	0/0:14,1:15:12.68:0,13,323	1/1:6,12:17:38.94:317,39,0	0/0:22,2:24:13.87:0,14,558	1/1:1,21:22:59.92:492,60,0
chr10	100218880	.	GT	G	1666.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.926;DP=500;FS=7.078;HRun=1;HaplotypeScore=60.5740;InbreedingCoeff=0.9757;MQ=70.87;MQ0=0;MQRankSum=-4.336;QD=34.02;ReadPosRankSum=1.933;VQSLOD=3.0845;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,49:49:99:1762,126,0	0/0:9,0:9:27.09:0,27,431	0/0:13,0:13:36.12:0,36,576	0/0:18,0:18:54.14:0,54,772	0/0:18,0:18:54.18:0,54,863	0/0:11,0:11:33.11:0,33,527	0/0:13,0:13:39.13:0,39,623	0/0:35,0:35:99:0,105,1616	0/0:14,0:14:42.11:0,42,623	0/0:14,0:14:42.14:0,42,672	0/0:19,0:19:57.18:0,57,874	0/0:7,0:7:21.05:0,21,309	0/0:12,0:12:35.79:0,36,535	0/0:19,0:19:57.19:0,57,910	0/0:19,0:18:57.19:0,57,910	0/0:14,0:14:42.14:0,42,671	0/0:19,0:19:57.15:0,57,857	0/0:10,0:10:27.07:0,27,421	0/0:28,0:28:84.27:0,84,1300	0/0:14,0:14:42.14:0,42,671	0/0:50,0:50:99:0,150,2374	0/0:5,0:5:15.05:0,15,239	0/0:11,0:11:33.11:0,33,522	0/0:20,0:20:60.17:0,60,909	0/0:15,0:15:45.13:0,45,691	0/0:16,0:16:48.16:0,48,747	0/0:20,0:20:60.20:0,60,959	0/0:8,0:8:23.99:0,24,285
chr10	100221305	.	TG	T	5080.47	PASS	AB=0.536;AC=16;AF=0.286;AN=56;BaseQRankSum=8.321;DP=517;FS=4.059;HRun=1;HaplotypeScore=60.8942;InbreedingCoeff=0.8463;MQ=60.83;MQ0=2;MQRankSum=-5.059;QD=35.28;ReadPosRankSum=-0.466;VQSLOD=4.6839;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.06:0,69,1036	0/0:12,0:12:36.12:0,36,571	0/0:17,0:11:30.97:0,31,423	0/0:24,1:17:44.55:0,45,579	0/0:27,0:26:78.27:0,78,1242	1/1:0,20:20:51.08:668,51,0	1/1:0,17:17:42.14:587,42,0	1/1:1,25:25:69.03:931,69,0	1/1:0,16:15:42.14:586,42,0	0/0:17,0:14:42.14:0,42,672	0/0:26,0:26:72.23:0,72,1121	0/0:12,0:12:29.72:0,30,425	0/0:8,0:8:24.08:0,24,383	0/0:18,0:18:47.37:0,47,725	0/0:21,0:21:57.18:0,57,887	1/1:0,10:10:30.10:419,30,0	0/0:24,0:23:69.23:0,69,1093	0/1:2,15:17:2.76:542,0,3	0/0:16,0:16:42.13:0,42,645	0/0:33,0:33:96.33:0,96,1513	1/1:0,14:14:39.13:545,39,0	0/0:27,0:27:78.27:0,78,1241	0/0:19,0:19:54.18:0,54,863	0/0:5,0:5:12.04:0,12,192	0/0:15,0:15:42.14:0,42,671	0/1:3,17:19:38.76:634,0,39	0/0:27,0:26:62.95:0,63,971	1/1:0,4:4:12.04:168,12,0
chr10	100221496	.	T	TCACA	6647.59	PASS	AB=0.600;AC=19;AF=0.339;AN=56;BaseQRankSum=-9.596;DP=586;FS=15.550;HRun=0;HaplotypeScore=89.8808;InbreedingCoeff=0.8881;MQ=61.01;MQ0=7;MQRankSum=-1.225;QD=37.77;ReadPosRankSum=-0.557;VQSLOD=3.8488;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:19:22.05:102,22,0	0/0:8,0:8:24.08:0,24,405	0/0:55,0:20:37.69:0,38,411	0/0:47,0:21:18.01:0,18,126	0/0:28,0:28:63.21:0,63,1043	1/1:0,18:19:36.12:883,36,0	1/1:2,9:11:15.05:373,15,0	1/1:8,24:37:87.23:1572,87,0	1/1:2,9:12:21.07:504,21,0	0/0:24,0:24:51.17:0,51,855	0/0:32,0:32:75.24:0,75,1215	0/0:13,0:13:33.11:0,33,553	0/0:18,0:18:42.11:0,42,656	0/0:16,0:16:42.12:0,42,681	0/0:21,0:21:57.15:0,57,868	1/1:1,15:15:17.87:448,18,0	0/0:20,0:20:28.97:0,29,545	1/1:5,8:14:21.07:438,21,0	0/0:23,0:23:42.13:0,42,680	0/0:26,0:26:60.13:0,60,944	1/1:0,10:11:21.07:523,21,0	0/0:14,0:14:30.09:0,30,473	0/0:22,0:22:54.18:0,54,902	0/0:4,0:4:3.01:0,3,51	0/0:15,0:15:42.14:0,42,708	0/1:5,10:15:17.55:611,0,18	0/0:21,0:22:55.38:0,55,830	1/1:1,21:22:48.16:1194,48,0
chr10	100222127	.	CATTG	C	986	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.748;DP=562;FS=1.836;HRun=0;HaplotypeScore=87.6954;InbreedingCoeff=0.9870;MQ=86.75;MQ0=0;MQRankSum=-1.760;QD=46.95;ReadPosRankSum=1.269;VQSLOD=4.2513;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:60.16:1081,60,0	0/0:10,0:10:30.10:0,30,769	0/0:24,0:24:67.91:0,68,1647	0/0:22,0:22:60.03:0,60,1449	0/0:24,0:24:66.23:0,66,1729	0/0:18,0:17:45.15:0,45,1200	0/0:14,0:14:39.12:0,39,981	0/0:38,0:38:99:0,102,2300	0/0:17,0:17:51.16:0,51,1287	0/0:28,0:28:78.26:0,78,2023	0/0:23,0:23:66.23:0,66,1740	0/0:16,0:16:48.16:0,48,1280	0/0:19,0:19:54.19:0,54,1438	0/0:16,0:16:45.15:0,45,1200	0/0:24,0:24:72.25:0,72,1920	0/0:21,0:21:63.22:0,63,1672	0/0:22,0:22:60.21:0,60,1573	0/0:6,0:6:18.06:0,18,445	0/0:13,0:13:33.11:0,33,880	0/0:38,0:38:99:0,111,2804	0/0:12,0:12:36.11:0,36,898	0/0:28,0:28:78.25:0,78,2019	0/0:21,0:21:63.22:0,63,1649	0/0:12,0:12:36.12:0,36,943	0/0:20,0:20:57.18:0,57,1460	0/0:26,0:26:72.24:0,72,1865	0/0:22,0:22:60.19:0,60,1512	0/0:7,0:7:21.07:0,21,529
chr10	100222900	.	G	GAA	3105.34	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-8.950;DP=464;FS=2.748;HRun=10;HaplotypeScore=64.0751;InbreedingCoeff=0.9698;MQ=85.61;MQ0=1;MQRankSum=-1.168;QD=22.67;ReadPosRankSum=-1.796;VQSLOD=2.7815;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:33:73.77:0,74,317	0/0:10,0:10:30.07:0,30,305	0/0:17,0:18:38.02:0,38,355	0/0:14,0:15:26.70:0,27,255	0/0:24,0:26:62.58:0,63,665	1/1:2,16:21:44.63:602,45,0	1/1:3,11:15:26.58:367,27,0	1/1:11,12:24:36.05:437,36,0	1/1:2,14:16:39.08:540,39,0	0/0:22,0:22:50.75:0,51,498	0/0:14,0:14:39:0,39,383	0/0:9,0:10:29.80:0,30,286	0/0:16,0:16:42.07:0,42,427	0/0:17,0:17:51.12:0,51,519	0/0:16,0:16:39.07:0,39,397	1/1:3,12:17:20.56:277,21,0	0/0:11,0:11:24.03:0,24,244	1/1:2,4:6:9.03:134,9,0	0/0:12,0:12:30.06:0,30,305	0/0:21,0:21:60.13:0,60,609	1/1:2,7:9:9.03:134,9,0	0/0:16,0:20:44.27:0,44,401	0/0:18,0:18:51.09:0,51,510	0/0:12,0:12:20.98:0,21,204	0/0:12,0:12:30.04:0,30,297	1/1:4,19:24:26.59:689,27,0	0/0:24,0:24:57.96:0,58,581	1/1:1,3:4:9.03:134,9,0
chr10	100223037	.	CA	C	3731.89	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=11.251;DP=507;FS=0.000;HRun=10;HaplotypeScore=53.2668;InbreedingCoeff=0.9885;MQ=80.78;MQ0=0;MQRankSum=-1.002;QD=21.82;ReadPosRankSum=-2.139;VQSLOD=3.6637;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:17:44.03:371,44,0	0/0:8,0:8:21.06:0,21,232	0/0:14,0:15:14.74:0,15,174	0/0:15,0:15:10.27:0,10,195	0/0:18,0:18:45.10:0,45,482	1/1:2,22:24:62.97:547,63,0	1/1:4,18:22:50.97:443,51,0	1/1:3,15:18:41.48:364,41,0	1/1:1,19:20:50.99:443,51,0	0/0:26,0:27:72.02:0,72,769	0/0:20,0:20:54.11:0,54,585	0/0:11,0:11:21.06:0,21,232	0/0:19,0:19:53.71:0,54,564	0/0:20,0:20:57.10:0,57,614	0/0:22,0:22:60.16:0,60,664	1/1:0,11:12:29.03:240,29,0	0/0:13,0:13:36.10:0,36,398	1/1:0,11:11:29.99:260,30,0	0/0:14,0:14:33.04:0,33,340	0/0:25,0:25:66.17:0,66,723	1/1:1,10:11:23.99:208,24,0	0/0:19,0:19:54.15:0,54,597	0/0:16,1:17:22.07:0,22,469	0/0:12,0:12:33.08:0,33,358	0/0:30,0:31:90.08:0,90,976	1/1:2,19:21:56.97:491,57,0	0/0:29,0:30:84.10:0,84,871	1/1:1,14:15:41.99:365,42,0
chr10	100224262	.	T	TTGTA	5075.14	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-4.144;DP=760;FS=3.271;HRun=0;HaplotypeScore=162.9566;InbreedingCoeff=0.8653;MQ=56.05;MQ0=10;MQRankSum=-4.312;QD=19.67;ReadPosRankSum=-1.619;VQSLOD=4.6111;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,1:34:45.07:995,45,0	0/0:9,0:9:20.99:0,21,299	0/0:24,0:6:18.06:0,18,305	0/0:22,0:11:23.82:0,24,386	0/0:24,0:24:57.17:0,57,904	1/1:4,22:30:2.35:36,2,0	1/1:3,21:25:9.03:146,9,0	1/1:42,0:42:78.16:1360,78,0	1/1:7,16:30:4.98:74,5,0	0/0:36,0:36:66.84:0,67,1252	0/0:34,0:34:93.32:0,93,1576	0/0:37,0:37:78.25:0,78,1270	0/0:36,0:36:61.65:0,62,969	0/0:35,0:35:78.19:0,78,1231	0/0:44,0:44:99:0,105,1740	1/1:4,13:19:2.54:30,3,0	0/0:22,0:22:36.11:0,36,573	1/1:3,13:16:5.51:48,6,0	0/0:20,0:20:39.13:0,39,638	0/0:29,0:29:69.12:0,69,1093	1/1:22,0:22:39.12:834,39,0	0/0:25,0:25:66.15:0,66,1042	0/0:28,0:28:60.12:0,60,1010	0/0:20,0:20:30.09:0,30,483	0/0:29,0:29:75.17:0,75,1210	1/1:5,22:30:24.22:1477,24,0	0/0:28,0:28:66.21:0,66,1058	1/1:2,5:8:3.01:75,3,0
chr10	100224266	.	A	ATGTA	5079.56	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-3.946;DP=773;FS=3.949;HRun=0;HaplotypeScore=172.4937;InbreedingCoeff=0.8032;MQ=54.73;MQ0=12;MQRankSum=-3.094;QD=18.74;ReadPosRankSum=-1.356;VQSLOD=4.3898;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:45.07:995,45,0	0/0:9,0:9:20.99:0,21,299	0/0:24,0:6:18.06:0,18,305	0/0:21,0:10:23.82:0,24,386	0/0:24,0:24:57.17:0,57,904	1/1:30,0:30:2.35:36,2,0	1/1:26,0:26:9.03:126,9,0	1/1:19,22:41:78.16:1360,78,0	1/1:31,0:32:4.98:74,5,0	0/0:37,0:37:66.84:0,67,1252	0/0:34,0:34:93.32:0,93,1576	0/0:35,0:35:78.25:0,78,1270	0/0:32,0:32:61.65:0,62,969	0/0:34,0:34:78.19:0,78,1231	0/0:44,0:44:99:0,105,1740	1/1:23,0:22:2.54:30,3,0	0/0:22,0:22:36.11:0,36,573	0/1:17,0:17:11.88:34,0,12	0/0:20,0:20:39.13:0,39,638	0/0:29,0:29:69.12:0,69,1093	1/1:23,0:23:39.12:834,39,0	0/0:26,0:26:66.15:0,66,1042	0/0:30,0:30:60.10:0,60,1010	0/0:20,0:20:30.09:0,30,483	0/0:31,0:31:75.17:0,75,1210	1/1:32,0:31:30.14:1516,30,0	0/0:28,0:28:66.21:0,66,1058	1/1:9,0:9:3.01:75,3,0
chr10	100224276	.	GTGTC	G	3617.60	PASS	AB=0.980;AC=17;AF=0.304;AN=56;BaseQRankSum=12.964;DP=779;FS=7.085;HRun=0;HaplotypeScore=178.6574;InbreedingCoeff=-0.4521;MQ=54.41;MQ0=11;MQRankSum=2.525;QD=7.29;ReadPosRankSum=2.752;VQSLOD=1.9614;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,3:35:73.14:110,0,73	0/1:10,0:10:55.64:56,0,75	0/0:24,0:8:23.70:0,24,231	0/0:22,0:8:24.03:0,24,259	0/1:29,0:29:99:123,0,228	0/0:31,0:31:1.78:0,2,16	0/0:23,0:22:3.97:0,4,168	0/1:35,0:33:99:286,0,120	0/0:30,0:30:7.83:0,8,53	0/0:37,0:37:99:0,108,1895	0/0:36,0:36:80.68:0,81,2017	0/1:33,0:33:99:217,0,282	0/1:32,0:32:99:351,0,102	0/1:39,0:39:99:349,0,179	0/1:45,0:45:99:418,0,230	0/0:22,0:21:7.19:0,7,42	0/1:26,0:26:7.07:247,0,7	0/0:15,0:15:6.75:0,7,37	0/1:22,0:21:47.57:48,0,297	0/1:32,0:32:78.08:340,0,78	0/1:13,7:20:6.62:231,0,7	0/1:29,0:29:99:233,0,213	0/1:29,0:29:99:220,0,152	0/1:20,0:20:99:102,0,107	0/0:34,0:34:87.10:0,87,1761	0/1:31,0:30:99:106,0,390	0/1:29,0:29:99:182,0,268	0/0:7,0:5:2.47:0,2,37
chr10	100224278	.	GTCTA	G	7535.55	PASS	AC=26;AF=0.481;AN=54;BaseQRankSum=1.059;DP=776;FS=3.991;HRun=0;HaplotypeScore=167.8247;InbreedingCoeff=0.8832;MQ=54.13;MQ0=11;MQRankSum=4.245;QD=20.53;ReadPosRankSum=2.229;VQSLOD=4.6558;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:20.04:0,20,201	1/1:4,6:10:9.03:142,9,0	0/0:26,0:9:6.02:0,6,108	./.	1/1:12,17:29:24.03:380,24,0	0/0:30,0:29:2.85:0,3,25	0/0:22,0:21:6.92:0,7,129	0/0:44,0:40:41.91:0,42,459	0/0:28,0:28:14.52:0,15,162	0/0:38,0:38:22.06:0,22,1384	0/0:36,1:37:27.75:0,28,1622	1/1:14,19:33:39.13:617,39,0	1/1:10,20:30:51.17:806,51,0	1/1:12,24:37:54.18:855,54,0	1/1:15,29:44:69.24:1092,69,0	0/0:21,0:20:11.96:0,12,118	1/1:4,19:23:36.12:569,36,0	0/0:14,0:14:5.98:0,6,58	1/1:16,6:21:14.99:237,15,0	1/1:7,26:33:57.15:845,57,0	0/0:20,0:20:6.45:0,6,95	1/1:11,17:28:39.13:617,39,0	1/1:10,18:29:35.87:569,36,0	1/1:9,10:20:17.18:284,17,0	0/0:34,0:34:31.84:0,32,1368	0/0:30,0:29:53.44:0,53,593	1/1:14,15:29:33:522,33,0	0/0:7,0:5:5.95:0,6,54
chr10	100225183	.	CT	C	4811.39	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.508;DP=625;FS=1.065;HRun=9;HaplotypeScore=64.0574;InbreedingCoeff=0.9974;MQ=77.21;MQ0=1;MQRankSum=-4.416;QD=21.67;ReadPosRankSum=1.476;VQSLOD=5.7355;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:18:42.02:384,42,0	0/0:7,0:7:21.05:0,21,234	0/0:17,1:18:17.53:0,18,387	0/0:18,0:18:41.86:0,42,401	0/0:22,1:23:29.72:0,30,596	1/1:0,38:38:99:933,102,0	1/1:2,16:19:44.06:390,44,0	1/1:8,31:39:92.95:825,93,0	1/1:5,12:17:33:302,33,0	0/0:26,0:26:66.20:0,66,761	0/0:18,0:18:54.15:0,54,614	0/0:24,0:24:63.18:0,63,719	0/0:18,0:18:45.13:0,45,513	0/0:24,1:25:44.72:0,45,747	0/0:21,0:21:60.04:0,60,673	1/1:5,21:26:57.02:522,57,0	0/0:24,0:24:63.06:0,63,682	1/1:2,10:12:24.01:220,24,0	0/0:29,0:30:81.02:0,81,876	0/0:36,0:36:93.19:0,93,1016	1/1:0,11:11:27.01:247,27,0	0/0:23,0:23:63.19:0,63,727	0/0:25,0:25:63.19:0,63,727	0/0:26,0:26:72.21:0,72,831	0/0:16,0:16:45.12:0,45,511	1/1:2,22:24:66.04:604,66,0	0/0:24,0:24:48.14:0,48,554	1/1:4,14:18:42.02:384,42,0
chr10	100226140	.	ACT	A	760.52	PASS	AB=0.873;AC=9;AF=0.180;AN=50;BaseQRankSum=3.551;DP=447;FS=2.577;HRun=0;HaplotypeScore=62.2543;InbreedingCoeff=0.4010;MQ=69.27;MQ0=3;MQRankSum=1.775;QD=6.79;ReadPosRankSum=2.136;VQSLOD=2.7525;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:2.73:0,3,24	0/0:6,0:6:6.02:0,6,91	./.	./.	0/1:15,4:19:67.44:67,0,326	0/0:18,0:18:3:0,3,25	0/0:9,0:8:2.95:0,3,26	0/0:36,0:36:9:0,9,85	0/0:15,0:14:2.74:0,3,26	0/0:21,0:21:21.52:0,22,281	0/1:13,2:15:15.46:15,0,203	0/0:8,0:8:12.04:0,12,179	0/0:10,0:10:21.07:0,21,319	0/0:17,0:17:36.12:0,36,537	0/0:16,0:16:30.07:0,30,412	0/0:12,0:11:3.01:0,3,43	0/0:19,0:20:27.51:0,28,325	0/0:12,0:14:15.42:0,15,147	1/1:12,6:19:21.30:194,21,0	1/1:13,10:22:32.93:349,33,0	./.	0/1:18,2:20:15.46:15,0,204	0/0:17,0:17:21.05:0,21,273	0/0:11,0:11:18.05:0,18,248	0/0:15,0:15:27.06:0,27,365	0/0:25,0:24:42.10:0,42,507	1/1:9,6:15:24.07:267,24,0	0/0:5,0:5:9.01:0,9,95
chr10	100226271	.	C	CT	2682.90	PASS	AB=0.930;AC=18;AF=0.321;AN=56;BaseQRankSum=3.138;DP=546;FS=8.365;HRun=7;HaplotypeScore=72.8296;InbreedingCoeff=0.8211;MQ=72.66;MQ0=14;MQRankSum=-2.912;QD=13.48;ReadPosRankSum=0.489;VQSLOD=2.6223;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:53.82:0,54,442	0/0:9,0:9:18.02:0,18,174	0/0:62,0:24:53.64:0,54,442	0/1:59,1:19:20.97:21,0,81	0/0:25,0:25:62.85:0,63,574	1/1:16,2:18:38.91:381,39,0	1/1:11,1:10:23.99:243,24,0	1/1:27,1:28:56.61:599,57,0	1/1:11,2:12:23.94:242,24,0	0/0:22,0:22:51.06:0,51,485	0/0:20,0:20:41.90:0,42,377	0/0:10,0:10:30.02:0,30,279	0/0:9,0:9:24.03:0,24,228	0/0:13,0:13:27.02:0,27,255	0/0:6,0:6:14.98:0,15,136	1/1:7,0:7:20.91:197,21,0	0/0:24,0:24:57.07:0,57,541	1/1:18,1:18:8.87:316,9,0	0/0:15,0:15:33.04:0,33,315	0/0:24,0:24:57.07:0,57,543	1/1:8,2:10:29.68:277,30,0	0/0:13,0:13:39.03:0,39,366	0/0:22,0:22:60.03:0,60,559	0/0:14,0:14:32.96:0,33,295	0/0:23,0:23:48.04:0,48,453	0/1:18,3:21:24.41:392,0,24	0/0:15,0:15:30.04:0,30,288	1/1:8,1:9:23.97:220,24,0
chr10	100227465	.	CAT	C	179.48	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.113;DP=271;FS=0.000;HRun=0;HaplotypeScore=42.4747;InbreedingCoeff=0.2746;MQ=79.22;MQ0=2;MQRankSum=0.570;QD=17.95;ReadPosRankSum=1.024;VQSLOD=2.9755;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,7:10:21.07:270,21,0	0/0:1,0:1:3.01:0,3,51	0/0:12,0:5:9.43:0,9,95	0/0:29,0:15:15.63:0,16,179	0/0:10,0:10:24.08:0,24,399	0/0:10,0:10:24.08:0,24,405	0/0:6,0:6:3.01:0,3,51	0/0:40,0:40:99:0,99,1646	0/0:8,0:8:6.02:0,6,101	0/0:8,0:8:12.04:0,12,203	0/0:7,0:7:9.03:0,9,152	0/0:5,0:5:6.02:0,6,88	0/0:4,0:4:3.01:0,3,51	0/0:8,0:8:12.04:0,12,188	0/0:4,0:4:6.02:0,6,101	0/0:4,0:4:6.02:0,6,101	0/0:24,0:24:69.16:0,69,1069	0/0:16,0:16:36.12:0,36,599	0/0:6,0:6:12.04:0,12,203	0/0:11,0:11:18.06:0,18,295	0/0:3,0:3:3.01:0,3,51	0/0:2,0:2:3.01:0,3,51	0/0:6,0:6:3.01:0,3,51	0/0:3,0:3:9.02:0,9,114	0/0:8,0:8:24.07:0,24,373	0/0:1,0:1:3.01:0,3,51	0/0:10,0:10:18.06:0,18,284	0/0:13,0:13:39.13:0,39,658
chr10	100231486	.	TG	T	17601.88	PASS	AB=0.909;AC=53;AF=0.946;AN=56;BaseQRankSum=0.493;DP=616;FS=2.030;HRun=3;HaplotypeScore=240.2612;InbreedingCoeff=0.5275;MQ=62.23;MQ0=0;MQRankSum=-3.422;QD=28.76;ReadPosRankSum=3.072;VQSLOD=3.6640;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:83.94:935,84,0	1/1:2,7:9:18.05:210,18,0	0/1:9,1:10:11.55:57,0,12	0/0:4,0:4:4.66:0,5,19	1/1:2,21:22:57.17:662,57,0	1/1:0,16:16:45.13:524,45,0	1/1:3,16:19:39.11:449,39,0	1/1:5,15:20:45.13:520,45,0	1/1:7,21:28:66.99:748,67,0	1/1:28,0:28:75.21:859,75,0	1/1:2,17:19:48.14:564,48,0	1/1:2,31:33:87.26:1013,87,0	1/1:5,25:30:69.18:792,69,0	1/1:2,21:23:57.16:655,57,0	1/1:2,23:25:54.16:630,54,0	1/1:3,17:20:48.14:560,48,0	1/1:1,28:29:78.23:905,78,0	1/1:1,8:9:24.07:278,24,0	1/1:6,19:25:60.16:687,60,0	1/1:0,20:20:60.18:701,60,0	1/1:3,16:19:38.30:425,38,0	1/1:2,25:27:75.22:875,75,0	1/1:1,23:24:66.19:767,66,0	1/1:0,21:21:57.17:659,57,0	1/1:2,26:28:76.11:875,76,0	1/1:2,29:31:81.70:932,82,0	1/1:3,29:32:85.13:975,85,0	1/1:2,10:12:30.09:346,30,0
chr10	100231489	.	GC	G	17601.78	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=0.751;DP=576;FS=4.225;HRun=1;HaplotypeScore=240.1132;InbreedingCoeff=0.4755;MQ=64.58;MQ0=0;MQRankSum=-3.819;QD=30.88;ReadPosRankSum=2.689;VQSLOD=4.3332;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:83.94:935,84,0	1/1:8,0:8:18.05:210,18,0	0/1:9,0:9:8.75:50,0,9	0/0:6,0:6:2.48:0,2,15	1/1:21,0:21:57.17:662,57,0	1/1:16,0:16:45.13:524,45,0	1/1:17,0:17:39.11:449,39,0	1/1:15,0:15:45.13:520,45,0	1/1:24,0:24:67.04:751,67,0	1/1:0,26:26:75.22:862,75,0	1/1:17,0:17:48.14:564,48,0	1/1:31,0:31:87.26:1013,87,0	1/1:25,0:25:69.18:792,69,0	1/1:22,0:22:57.16:655,57,0	1/1:23,0:23:54.16:630,54,0	1/1:19,0:19:48.14:560,48,0	1/1:29,0:29:78.23:905,78,0	1/1:8,0:8:24.07:278,24,0	1/1:22,0:22:60.17:687,60,0	1/1:21,0:21:60.18:701,60,0	1/1:18,0:18:38.60:426,39,0	1/1:25,0:25:75.22:875,75,0	1/1:24,0:24:66.19:767,66,0	1/1:22,0:22:57.17:659,57,0	1/1:27,0:27:76.11:875,76,0	1/1:29,0:29:81.70:932,82,0	1/1:30,0:30:85.13:975,85,0	1/1:10,0:10:30.09:346,30,0
chr10	100231848	.	T	TA	1899.56	PASS	AB=0.836;AC=20;AF=0.370;AN=54;BaseQRankSum=5.060;DP=496;FS=3.974;HRun=14;HaplotypeScore=69.4271;InbreedingCoeff=0.2376;MQ=71.41;MQ0=1;MQRankSum=-0.175;QD=6.86;ReadPosRankSum=-1.632;VQSLOD=2.3604;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:24:36.46:0,36,226	./.	0/1:23,0:15:11.86:12,0,33	0/0:12,0:7:3.13:0,3,41	0/1:16,5:22:22.16:22,0,158	1/1:7,12:20:13.25:217,13,0	1/1:10,8:20:19.19:255,19,0	0/1:21,15:36:44.11:233,0,44	1/1:1,15:16:23.99:208,24,0	0/1:18,1:19:22.78:23,0,124	0/0:16,0:17:21.45:0,21,201	0/1:10,1:11:12.35:12,0,50	0/0:12,0:12:24.83:0,25,156	0/1:9,2:11:27.10:27,0,122	0/0:10,0:11:18.57:0,19,127	1/1:3,13:17:19.57:284,20,0	0/0:28,0:29:54.13:0,54,343	1/1:3,19:23:38.99:343,39,0	0/0:13,0:15:21.19:0,21,125	0/1:13,2:15:26.28:26,0,75	0/1:8,1:9:7.29:60,0,7	0/0:20,0:20:21.33:0,21,229	0/0:21,2:24:21.44:0,21,253	0/0:6,0:7:13.80:0,14,83	0/0:20,0:21:45.96:0,46,284	0/1:11,7:20:2.11:215,0,2	0/0:25,0:25:58.15:0,58,370	0/1:6,8:15:11.70:146,0,12
chr10	100232412	.	CT	C	1987.04	PASS	AB=0.801;AC=17;AF=0.327;AN=52;BaseQRankSum=9.631;DP=311;FS=4.918;HRun=9;HaplotypeScore=37.1781;InbreedingCoeff=0.7244;MQ=74.37;MQ0=0;MQRankSum=-4.390;QD=17.43;ReadPosRankSum=-0.664;VQSLOD=2.9942;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:48.14:0,48,554	0/0:4,0:4:9.03:0,9,104	0/1:10,2:13:10.41:10,0,165	./.	0/0:15,0:16:44.97:0,45,499	1/1:2,9:11:27.01:247,27,0	1/1:1,4:5:12:110,12,0	1/1:6,17:23:57.01:518,57,0	1/1:0,2:2:6:55,6,0	0/0:6,0:6:15.04:0,15,173	0/0:15,0:15:42.12:0,42,485	0/0:6,0:6:12.04:0,12,139	0/0:15,0:15:39.10:0,39,441	0/0:10,0:10:27.08:0,27,312	0/0:13,0:13:36.11:0,36,416	1/1:0,7:7:21.01:192,21,0	0/0:17,0:17:45.11:0,45,499	0/1:7,16:23:9.20:434,0,9	0/0:14,0:14:30.09:0,30,346	0/0:12,0:12:36.11:0,36,415	./.	0/0:6,0:6:15.04:0,15,173	0/0:11,0:11:24.07:0,24,277	0/1:6,0:6:5.63:6,0,155	0/0:7,0:7:15.04:0,15,173	1/1:2,13:15:39.02:357,39,0	0/0:18,0:18:48.14:0,48,553	1/1:0,9:9:27.01:247,27,0
chr10	100232457	.	A	AT	2659.31	PASS	AB=1.000;AC=19;AF=0.352;AN=54;BaseQRankSum=-0.240;DP=249;FS=6.745;HRun=7;HaplotypeScore=30.1268;InbreedingCoeff=0.8205;MQ=64.33;MQ0=0;MQRankSum=-4.302;QD=27.42;ReadPosRankSum=-2.445;VQSLOD=2.6624;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:36.11:435,36,0	0/0:6,0:6:14.05:0,14,122	0/0:7,0:5:9.48:0,9,87	0/1:5,0:4:7.04:7,0,48	0/0:12,0:12:33.04:0,33,313	1/1:0,9:9:27.08:326,27,0	1/1:1,2:3:8.99:92,9,0	1/1:5,19:24:60.12:695,60,0	1/1:0,2:2:6.02:72,6,0	0/0:6,0:6:18.03:0,18,173	0/0:15,0:15:39.05:0,39,371	0/0:3,0:3:6.01:0,6,58	0/0:16,0:16:39.05:0,39,377	0/0:6,0:6:15.02:0,15,145	0/0:7,0:7:15.02:0,15,145	1/1:0,3:3:9.03:109,9,0	0/0:14,0:14:42.06:0,42,400	1/1:1,15:15:39.12:470,39,0	0/0:12,0:12:24:0,24,221	0/0:11,0:11:30.04:0,30,289	./.	0/0:2,0:2:3:0,3,29	0/0:11,0:11:27.03:0,27,255	0/0:5,0:5:12.02:0,12,116	0/0:5,0:5:15.02:0,15,145	1/1:1,15:16:45.14:543,45,0	0/0:14,0:14:39.06:0,39,377	1/1:1,3:4:9.03:109,9,0
chr10	100232987	.	T	TAC	351.33	PASS	AB=0.872;AC=11;AF=0.367;AN=30;BaseQRankSum=1.473;DP=59;FS=9.995;HRun=0;HaplotypeScore=17.8092;InbreedingCoeff=0.1909;MQ=68.14;MQ0=3;MQRankSum=2.581;QD=10.04;ReadPosRankSum=0.793;VQSLOD=1.3533;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:1,0:2:2.93:0,3,23	./.	0/0:2,0:2:5.99:0,6,48	1/1:3,0:3:5.99:48,6,0	1/1:3,0:3:5.99:49,6,0	0/1:15,0:14:24.01:207,0,24	./.	0/0:1,0:1:3:0,3,28	0/0:1,0:1:3:0,3,25	0/0:1,0:1:2.99:0,3,23	0/0:1,0:1:3:0,3,25	./.	./.	1/1:3,0:3:8.99:74,9,0	0/0:8,0:8:17.82:0,18,128	0/1:3,5:7:17.11:45,0,17	./.	0/0:2,0:2:5.99:0,6,50	1/1:1,0:1:3:25,3,0	./.	./.	./.	./.	./.	./.	0/1:2,0:2:15.98:17,0,16
chr10	100233250	.	GT	G	5690.28	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=10.084;DP=435;FS=9.908;HRun=6;HaplotypeScore=44.6654;InbreedingCoeff=0.9734;MQ=82.32;MQ0=0;MQRankSum=-3.508;QD=28.45;ReadPosRankSum=3.319;VQSLOD=4.8098;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:57.14:612,57,0	0/0:2,0:2:6.02:0,6,79	0/0:13,0:13:39:0,39,421	0/0:18,0:16:33.07:0,33,402	0/0:13,0:13:39.13:0,39,511	1/1:1,30:31:90.20:957,90,0	1/1:2,12:14:33.08:354,33,0	1/1:3,30:33:87.15:901,87,0	1/1:1,17:18:51.13:548,51,0	0/0:13,0:13:36.11:0,36,451	0/0:11,0:11:33.10:0,33,421	0/0:11,0:11:33.11:0,33,434	0/0:13,0:13:33.11:0,33,434	0/0:10,0:10:30.10:0,30,393	0/0:15,0:15:42.14:0,42,553	1/1:1,13:14:39.10:419,39,0	0/0:19,0:19:54.16:0,54,694	1/1:0,15:15:42.11:451,42,0	0/0:22,0:22:54.17:0,54,704	0/0:8,0:8:21.05:0,21,260	1/1:2,11:13:9.06:328,9,0	0/0:7,0:7:18.05:0,18,222	0/0:10,0:10:27.08:0,27,341	0/0:9,0:9:27.09:0,27,355	0/0:14,0:14:42.14:0,42,551	1/1:3,25:28:38.72:766,39,0	0/0:27,0:27:78.24:0,78,1012	1/1:0,11:11:33.08:354,33,0
chr10	100233336	.	C	CT	4709.23	PASS	AB=0.955;AC=20;AF=0.357;AN=56;BaseQRankSum=-12.747;DP=477;FS=5.192;HRun=9;HaplotypeScore=49.1647;InbreedingCoeff=0.8847;MQ=71.47;MQ0=0;MQRankSum=-1.047;QD=24.53;ReadPosRankSum=-1.645;VQSLOD=5.0644;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:62.96:0,63,543	0/0:7,0:7:21:0,21,182	0/0:14,0:13:17.90:0,18,195	0/1:6,0:7:4.63:5,0,47	0/0:17,0:17:44.97:0,45,389	1/1:2,17:19:28.10:538,28,0	1/1:5,21:26:38.28:609,38,0	1/1:9,31:43:81.83:1062,82,0	1/1:2,17:19:57.15:629,57,0	0/0:22,0:22:53.97:0,54,468	0/0:15,0:15:38.98:0,39,338	0/0:12,0:12:32.99:0,33,287	0/0:13,0:13:32.99:0,33,286	0/1:9,1:10:3.19:3,0,204	0/0:17,0:17:47.99:0,48,417	1/1:3,5:8:21.05:225,21,0	0/0:17,0:17:41.98:0,42,365	1/1:3,8:12:29.58:291,30,0	0/0:24,0:25:62.01:0,62,527	0/0:11,0:11:26.99:0,27,234	1/1:0,12:12:36.10:398,36,0	0/0:13,0:13:32.97:0,33,286	0/0:22,0:22:56.97:0,57,495	0/0:9,0:9:26.99:0,27,234	0/0:21,0:21:50.97:0,51,443	1/1:9,19:28:43.11:684,43,0	0/0:27,0:28:61.98:0,62,523	1/1:0,8:8:24.06:265,24,0
chr10	100234491	.	TG	T	5607.54	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.243;DP=628;FS=12.946;HRun=8;HaplotypeScore=64.1673;InbreedingCoeff=0.9932;MQ=83.16;MQ0=0;MQRankSum=-4.174;QD=26.45;ReadPosRankSum=1.664;VQSLOD=4.7581;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:15:11.50:0,11,62	0/0:6,0:6:18.06:0,18,217	0/0:18,0:19:36.29:0,36,441	0/0:22,1:22:52.16:0,52,567	0/0:28,0:28:81.25:0,81,977	1/1:1,33:34:99:956,99,0	1/1:1,12:13:33.05:319,33,0	1/1:4,28:32:84.12:806,84,0	1/1:1,28:29:81.13:782,81,0	0/0:20,0:20:51.16:0,51,615	0/0:25,0:25:57.14:0,57,656	0/0:19,0:19:54.15:0,54,628	0/0:25,0:25:72.22:0,72,869	0/0:19,0:19:54.16:0,54,646	0/0:24,0:23:66.20:0,66,797	1/1:3,30:33:87.14:840,87,0	0/0:26,0:26:72.18:0,72,843	1/1:0,13:13:39.03:369,39,0	0/0:25,0:25:69.17:0,69,798	0/0:33,0:33:90.28:0,90,1087	1/1:0,22:22:57.09:551,57,0	0/0:17,0:17:36.11:0,36,435	0/0:29,0:29:75.23:0,75,906	0/0:16,0:16:45.13:0,45,533	0/0:17,0:17:48.14:0,48,570	1/1:2,24:26:72.11:695,72,0	0/0:30,0:30:46.08:0,46,817	1/1:0,10:10:30.05:290,30,0
chr10	100234954	.	A	ATTTTCATTTC	11665.37	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=-5.591;DP=424;FS=17.023;HRun=0;HaplotypeScore=114.1264;InbreedingCoeff=0.9774;MQ=68.86;MQ0=0;MQRankSum=-11.185;QD=106.05;ReadPosRankSum=-3.292;VQSLOD=3.5556;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:30.10:0,30,954	0/0:6,0:6:18.06:0,18,575	0/0:7,0:7:11.23:0,11,388	0/0:8,0:8:14.91:0,15,390	0/0:16,0:16:39.12:0,39,1124	1/1:6,9:15:39.13:1824,39,0	1/1:3,8:15:30.10:1550,30,0	1/1:10,7:24:66.23:2736,66,0	1/1:4,6:12:24.08:1048,24,0	0/0:19,0:19:48.15:0,48,1384	0/0:17,0:17:48.15:0,48,1370	0/0:13,0:13:33.10:0,33,962	0/0:17,0:17:45.15:0,45,1377	0/0:21,0:21:60.19:0,60,1785	0/0:15,0:15:39.13:0,39,1115	1/1:3,6:9:24.08:1244,24,0	0/0:21,0:21:63.20:0,63,1855	1/1:1,2:4:9.03:466,9,0	0/0:22,0:22:63.22:0,63,2012	0/0:22,0:22:60.16:0,60,1703	1/1:6,5:12:18.06:890,18,0	0/0:18,0:18:48.16:0,48,1533	0/0:20,0:20:51.17:0,51,1535	0/0:19,0:19:51.17:0,51,1492	0/0:17,0:17:45.14:0,45,1340	1/1:4,9:18:51.13:1907,51,0	0/0:21,0:21:63.22:0,63,1879	./.
chr10	100235175	.	G	GATGTTTGCC	3450.77	PASS	AC=32;AF=0.889;AN=36;BaseQRankSum=-2.240;DP=79;FS=5.469;HRun=0;HaplotypeScore=24.1041;InbreedingCoeff=0.2827;MQ=68.77;MQ0=4;MQRankSum=-2.820;QD=66.36;ReadPosRankSum=-1.344;VQSLOD=1.9022;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:5.98:69,6,0	./.	0/0:11,0:5:2.74:0,3,92	0/0:5,0:1:3.01:0,3,36	1/1:1,1:3:6.02:225,6,0	./.	./.	./.	1/1:2,1:2:6.02:242,6,0	1/1:3,0:2:6.02:230,6,0	1/1:3,3:5:9.03:227,9,0	1/1:1,1:2:3.01:80,3,0	1/1:2,0:2:3.01:81,3,0	1/1:3,1:4:9.03:344,9,0	1/1:3,1:4:6.02:155,6,0	1/1:1,2:2:6.02:273,6,0	./.	1/1:2,0:2:6.02:188,6,0	./.	./.	./.	./.	1/1:5,1:5:12.04:353,12,0	./.	1/1:3,0:3:9.03:189,9,0	1/1:0,1:1:3.01:149,3,0	1/1:2,0:2:9.03:348,9,0	1/1:0,2:2:6.02:295,6,0
chr10	100235232	.	T	TA	2574.81	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-1.720;DP=275;FS=0.737;HRun=8;HaplotypeScore=34.6232;InbreedingCoeff=0.8258;MQ=50.99;MQ0=31;MQRankSum=0.181;QD=26.01;ReadPosRankSum=-1.733;VQSLOD=3.1998;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:39.02:0,39,357	0/0:2,0:2:6:0,6,55	0/0:19,0:5:15:0,15,134	0/0:26,1:2:3:0,3,27	0/0:6,0:6:18.01:0,18,165	1/1:0,7:7:18.05:208,18,0	1/1:0,5:5:15:158,15,0	1/1:6,18:24:54.16:623,54,0	1/1:0,11:10:30.05:331,30,0	0/0:9,0:9:27.01:0,27,247	0/0:20,0:19:57.03:0,57,522	0/0:4,0:4:11.99:0,12,105	0/0:4,0:4:12.01:0,12,109	0/0:12,0:12:33.02:0,33,302	0/0:11,0:11:30.02:0,30,275	1/1:0,9:9:27.08:312,27,0	0/0:8,0:8:24:0,24,215	1/1:0,8:8:24.07:277,24,0	0/1:7,0:8:9.51:10,0,148	0/0:3,0:3:9:0,9,82	1/1:1,7:8:21.06:242,21,0	0/0:1,0:1:3:0,3,27	0/0:15,0:14:39.02:0,39,357	0/0:3,0:3:9:0,9,82	0/0:6,0:6:18.01:0,18,165	1/1:2,7:9:24.07:276,24,0	0/0:9,0:9:27.01:0,27,247	1/1:0,10:10:30.09:346,30,0
chr10	100237145	.	T	TA	5486.15	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-15.866;DP=595;FS=2.954;HRun=8;HaplotypeScore=52.8638;InbreedingCoeff=0.9353;MQ=71.26;MQ0=0;MQRankSum=-0.889;QD=26.76;ReadPosRankSum=-1.907;VQSLOD=4.8843;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.02:0,81,736	0/0:11,0:11:27.01:0,27,247	0/1:8,0:8:3.47:3,0,37	0/0:6,1:7:8.92:0,9,72	0/0:23,0:23:60.03:0,60,549	1/1:0,32:32:84.25:969,84,0	1/1:2,14:16:33.10:381,33,0	1/1:4,27:31:81.24:935,81,0	1/1:2,18:20:39.12:450,39,0	0/0:31,0:31:84.04:0,84,769	0/0:24,0:24:63.01:0,63,568	0/0:23,0:23:60.02:0,60,549	0/0:16,0:16:45.02:0,45,411	0/0:22,0:22:60.03:0,60,549	0/0:26,0:26:66.02:0,66,601	1/1:2,12:14:36.11:416,36,0	0/0:26,0:26:78.03:0,78,709	1/1:1,17:18:42.12:483,42,0	0/0:23,0:23:60.02:0,60,549	0/0:25,0:25:72.02:0,72,655	1/1:3,20:23:42.30:577,42,0	0/0:20,0:20:54.03:0,54,494	0/0:24,0:24:66:0,66,593	0/0:16,0:16:36.01:0,36,329	0/0:20,0:20:54.02:0,54,494	1/1:2,27:29:81.23:925,81,0	0/0:23,0:23:37.60:0,38,524	1/1:2,12:14:30.09:347,30,0
chr10	100241976	.	CTCT	C	1699.99	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.085;DP=652;FS=16.843;HRun=0;HaplotypeScore=88.7007;InbreedingCoeff=0.9988;MQ=71.19;MQ0=0;MQRankSum=-3.210;QD=43.59;ReadPosRankSum=1.637;VQSLOD=4.2715;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:39:99:1795,102,0	0/0:21,0:21:63.20:0,63,1444	0/0:11,0:11:29.99:0,30,594	0/0:11,0:11:30.10:0,30,678	0/0:40,0:40:99:0,120,2717	0/0:19,0:19:57.18:0,57,1299	0/0:20,0:20:57.20:0,57,1307	0/0:18,0:18:54.17:0,54,1176	0/0:21,0:21:63.22:0,63,1489	0/0:20,0:20:60.20:0,60,1376	0/0:20,0:20:60.19:0,60,1373	0/0:32,0:32:96.28:0,96,2124	0/0:25,0:25:72.18:0,72,1465	0/0:27,0:27:81.28:0,81,1889	0/0:18,0:18:54.19:0,54,1252	0/0:23,0:23:69.24:0,69,1631	0/0:23,0:23:69.24:0,69,1631	0/0:21,0:21:63.18:0,63,1408	0/0:19,0:19:57.17:0,57,1202	0/0:32,0:32:93.24:0,93,1919	0/0:13,0:13:39.13:0,39,922	0/0:27,0:27:81.26:0,81,1801	0/0:26,0:26:78.27:0,78,1837	0/0:14,0:14:42.14:0,42,972	0/0:36,0:36:99:0,108,2507	0/0:36,0:35:99:0,105,2353	0/0:27,0:27:75.20:0,75,1582	0/0:13,0:13:39.12:0,39,869
chr10	100244060	.	A	AGT	6430.74	PASS	AC=18;AF=0.333;AN=54;BaseQRankSum=-12.529;DP=667;FS=20.242;HRun=0;HaplotypeScore=81.6497;InbreedingCoeff=0.9993;MQ=71.60;MQ0=1;MQRankSum=-3.387;QD=31.52;ReadPosRankSum=-0.674;VQSLOD=4.7659;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:17:24.01:216,24,0	0/0:12,0:12:30.09:0,30,367	0/0:28,0:24:45.08:0,45,545	0/0:24,0:22:33.10:0,33,400	0/0:29,0:30:81.06:0,81,943	1/1:4,13:17:42.14:682,42,0	1/1:3,12:15:27.09:438,27,0	1/1:13,22:35:32.55:1027,33,0	1/1:6,17:23:48.16:779,48,0	0/0:33,0:33:84.26:0,84,1027	0/0:20,0:20:45.13:0,45,538	0/0:22,0:22:57.17:0,57,686	0/0:24,0:23:42.13:0,42,513	0/0:26,0:26:60.19:0,60,733	0/0:30,0:30:63.16:0,63,754	1/1:7,16:22:54.18:876,54,0	0/0:28,0:28:63.17:0,63,755	1/1:6,13:19:45.08:674,45,0	0/0:21,0:22:47.95:0,48,533	0/0:29,0:29:63.18:0,63,757	1/1:8,14:22:36.12:581,36,0	0/0:24,0:24:63.19:0,63,758	0/0:27,0:27:69.22:0,69,843	0/0:24,0:24:48.14:0,48,575	0/0:39,0:40:99:0,111,1334	1/1:8,24:31:41.58:1159,42,0	0/0:20,0:20:39.12:0,39,476	./.
chr10	100244143	.	CT	C	3564.16	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=12.197;DP=535;FS=0.000;HRun=10;HaplotypeScore=57.5801;InbreedingCoeff=0.9848;MQ=71.30;MQ0=0;MQRankSum=-0.244;QD=21.87;ReadPosRankSum=1.557;VQSLOD=4.5132;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:19:44.98:391,45,0	0/0:5,0:5:12.03:0,12,132	0/0:9,0:9:21.52:0,22,228	0/0:10,0:10:8.86:0,9,65	0/0:31,1:32:55.14:0,55,821	1/1:1,14:15:38.99:339,39,0	1/1:5,13:18:35.99:313,36,0	1/1:4,21:25:62.96:541,63,0	1/1:3,11:14:35.97:308,36,0	0/0:22,2:24:40.11:0,40,664	0/0:20,1:21:28.09:0,28,538	0/0:11,0:11:27.06:0,27,291	0/0:17,0:17:41.19:0,41,469	0/0:19,0:19:45.12:0,45,498	0/0:23,1:24:31.06:0,31,552	1/1:0,13:13:35.98:313,36,0	0/0:26,0:27:72.03:0,72,777	1/1:1,16:18:50.03:423,50,0	0/0:21,0:21:57.14:0,57,622	0/0:41,0:41:99:0,108,1188	1/1:0,8:8:24:208,24,0	0/0:19,0:19:54.14:0,54,590	0/0:24,0:24:69.19:0,69,763	0/0:10,0:10:26.99:0,27,271	0/0:31,0:31:87.22:0,87,954	1/1:2,20:21:59.99:521,60,0	0/0:25,0:26:69.03:0,69,734	1/1:3,8:11:23.99:208,24,0
chr10	100246547	.	CAG	C	4139.92	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=5.977;DP=408;FS=6.378;HRun=0;HaplotypeScore=55.4039;InbreedingCoeff=0.9826;MQ=84.23;MQ0=1;MQRankSum=-1.392;QD=26.71;ReadPosRankSum=6.549;VQSLOD=3.9011;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:19:20.74:70,21,0	0/0:9,0:9:26.99:0,27,313	0/0:16,0:16:18.26:0,18,362	0/0:14,0:13:26.83:0,27,281	0/0:13,0:13:36:0,36,451	1/1:0,20:20:42.14:662,42,0	1/1:1,14:15:27.56:429,28,0	1/1:0,21:22:59.81:723,60,0	1/1:0,9:10:12.03:192,12,0	0/0:14,0:14:39.09:0,39,628	0/0:8,0:8:20.98:0,21,206	0/0:16,0:16:38.97:0,39,393	0/0:21,0:21:56.88:0,57,497	0/0:15,0:15:44.99:0,45,481	0/0:15,0:15:44.98:0,45,480	1/1:0,15:15:24.08:366,24,0	0/0:16,0:16:42.02:0,42,556	1/1:0,11:11:24.08:379,24,0	0/0:15,0:15:41.99:0,42,527	0/0:10,0:10:29.98:0,30,302	1/1:14,11:26:56.97:720,57,0	0/0:10,0:10:27.06:0,27,455	0/0:9,0:9:23.98:0,24,262	0/0:15,0:15:38.99:0,39,527	0/0:12,0:12:32.99:0,33,511	1/1:0,13:14:36.01:457,36,0	0/0:24,0:24:69.42:0,69,835	1/1:0,3:3:9.03:141,9,0
chr10	100246944	.	ACT	A	146.82	PASS	AB=0.833;AC=3;AF=0.054;AN=56;BaseQRankSum=2.099;DP=208;FS=7.823;HRun=0;HaplotypeScore=33.0506;InbreedingCoeff=0.4391;MQ=70.57;MQ0=0;MQRankSum=-0.670;QD=10.49;ReadPosRankSum=-1.979;VQSLOD=0.9038;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,4:9:23.98:238,24,0	0/0:3,0:3:9.02:0,9,131	0/1:4,0:5:5.49:5,0,48	0/0:6,0:4:6.88:0,7,75	0/0:6,0:6:15.04:0,15,211	0/0:12,0:12:35.92:0,36,359	0/0:7,0:7:17.83:0,18,216	0/0:21,0:21:50.97:0,51,503	0/0:16,0:16:43.18:0,43,257	0/0:9,0:9:18:0,18,200	0/0:2,0:2:3.01:0,3,53	0/0:6,0:6:18.05:0,18,256	0/0:7,0:7:15.52:0,16,240	0/0:8,0:8:23.95:0,24,318	0/0:5,0:5:15.04:0,15,234	0/0:6,0:6:18.06:0,18,304	0/0:2,0:2:6.02:0,6,93	0/0:15,0:15:35.75:0,36,175	0/0:1,0:1:0.89:0,1,2	0/0:5,0:5:9.49:0,9,120	0/0:12,0:12:29.76:0,30,401	0/0:7,0:7:17.82:0,18,184	0/0:11,0:11:24.92:0,25,299	0/0:3,0:3:8.92:0,9,109	0/0:5,0:5:15.01:0,15,168	0/0:12,0:12:29.68:0,30,299	0/0:5,0:5:12.03:0,12,154	0/0:2,0:2:6.02:0,6,106
chr10	100246946	.	TC	T	586.82	PASS	AB=0.890;AC=12;AF=0.214;AN=56;BaseQRankSum=3.469;DP=204;FS=3.184;HRun=11;HaplotypeScore=27.0083;InbreedingCoeff=0.1730;MQ=68.35;MQ0=0;MQRankSum=0.210;QD=7.34;ReadPosRankSum=3.113;VQSLOD=0.4159;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:8:6.75:7,0,7	0/0:3,0:3:6.02:0,6,64	0/0:5,0:5:8.10:0,8,74	0/1:7,0:4:14.56:15,0,22	0/0:6,0:6:6:0,6,56	0/1:10,2:12:15.62:16,0,55	0/0:7,0:7:9:0,9,87	0/0:22,1:23:8.95:0,9,69	1/1:4,12:16:35.95:295,36,0	0/0:9,0:9:9.02:0,9,95	0/0:1,0:1:3.01:0,3,32	0/0:6,0:6:12.01:0,12,113	0/0:7,0:7:9:0,9,83	0/1:7,1:8:9.64:10,0,93	0/0:5,0:5:12.02:0,12,121	0/0:6,0:6:18.04:0,18,186	0/0:2,0:2:3:0,3,25	1/1:4,10:14:38.96:320,39,0	1/1:1,0:1:2.94:18,3,0	0/0:4,1:5:3.01:0,3,32	0/0:12,0:12:15.01:0,15,153	0/0:6,0:6:3.01:0,3,32	0/0:9,0:9:9.01:0,9,89	0/1:2,1:3:18.63:19,0,25	0/0:5,0:5:0:0,0,0	0/1:9,2:11:23.06:36,0,23	0/0:5,0:5:3.01:0,3,32	0/0:2,0:2:6:0,6,57
chr10	100247134	.	GT	G	1540.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.450;DP=578;FS=1.321;HRun=1;HaplotypeScore=72.6418;InbreedingCoeff=0.9607;MQ=87.79;MQ0=0;MQRankSum=-4.239;QD=35.83;ReadPosRankSum=1.498;VQSLOD=3.8857;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,43:43:99:1636,117,0	0/0:7,0:7:21.04:0,21,310	0/0:16,0:16:48.16:0,48,763	0/0:27,0:27:75.65:0,76,1086	0/0:12,0:12:33.11:0,33,528	0/0:14,0:14:42.14:0,42,671	0/0:19,0:19:57.19:0,57,911	0/0:27,0:27:81.28:0,81,1288	0/0:16,0:16:48.15:0,48,739	0/0:13,0:13:39.13:0,39,623	0/0:10,0:10:30.10:0,30,479	0/0:35,0:35:99:0,99,1560	0/0:20,0:20:60.20:0,60,958	0/0:27,0:27:81.28:0,81,1291	0/0:23,0:23:66.22:0,66,1048	0/0:17,0:17:51.17:0,51,812	0/0:40,0:40:99:0,120,1892	0/0:28,0:28:84.25:0,84,1316	0/0:21,0:21:63.21:0,63,982	0/0:9,0:9:27.09:0,27,425	0/0:49,0:49:99:0,144,2235	0/0:12,0:12:33.11:0,33,527	0/0:7,0:7:21.07:0,21,336	0/0:35,0:35:99:0,105,1645	0/0:13,0:13:39.12:0,39,600	0/0:18,0:18:48.16:0,48,767	0/0:16,0:16:48.09:0,48,691	0/0:4,0:4:12.04:0,12,179
chr10	100247372	.	T	TACACAC	3994.98	PASS	AB=0.887;AC=19;AF=0.352;AN=54;BaseQRankSum=4.113;DP=615;FS=8.182;HRun=0;HaplotypeScore=147.6941;InbreedingCoeff=0.7460;MQ=58.55;MQ0=6;MQRankSum=-5.629;QD=14.69;ReadPosRankSum=-4.723;VQSLOD=0.4235;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:42:30.10:386,30,0	0/0:10,0:12:27.09:0,27,518	0/1:22,0:17:0.82:1,0,36	./.	0/0:18,0:19:35.48:0,35,690	1/1:12,9:24:18.06:467,18,0	1/1:15,5:22:12.04:331,12,0	1/1:26,0:25:26.95:431,27,0	1/1:9,6:19:9.92:294,10,0	0/0:20,0:23:36.22:0,36,599	0/0:19,0:20:8.97:0,9,467	0/0:26,0:26:43.93:0,44,819	0/0:15,0:16:27.07:0,27,488	0/0:24,0:26:54.14:0,54,978	0/0:17,0:18:33.73:0,34,684	1/1:14,12:29:18.06:500,18,0	0/0:21,0:21:30.10:0,30,619	0/1:15,1:16:51.35:269,0,51	0/0:13,0:13:12.03:0,12,213	0/0:9,0:20:7.44:0,7,71	0/1:23,1:32:52.99:68,0,53	0/0:17,0:20:33.10:0,33,605	0/0:12,0:15:20.94:0,21,354	0/0:31,0:33:46.80:0,47,1088	0/0:18,0:20:26.89:0,27,469	1/1:20,9:29:45.97:891,46,0	0/0:25,0:24:48.06:0,48,935	1/1:5,1:7:15.05:357,15,0
chr10	100248791	.	GGA	G	208.98	PASS	AB=1.000;AC=3;AF=0.056;AN=54;BaseQRankSum=6.581;DP=339;FS=22.281;HRun=0;HaplotypeScore=48.1175;InbreedingCoeff=0.3898;MQ=76.09;MQ0=18;MQRankSum=-1.767;QD=2.49;ReadPosRankSum=4.387;VQSLOD=-0.0570;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:14:23.85:300,24,0	0/0:4,0:4:12.04:0,12,188	0/0:47,0:10:9.78:0,10,76	0/1:67,0:20:8.26:8,0,116	0/0:10,0:10:18.03:0,18,239	0/0:7,0:7:6.71:0,7,132	0/0:12,0:12:8.78:0,9,251	0/0:10,0:10:11.40:0,11,217	0/0:5,0:5:6.81:0,7,130	0/0:8,0:8:21.07:0,21,328	0/0:8,0:8:21.07:0,21,327	0/0:11,0:10:24.07:0,24,344	0/0:11,0:11:27.08:0,27,408	0/0:10,0:9:24.08:0,24,367	0/0:8,0:8:24.08:0,24,371	0/0:12,0:12:7.45:0,7,208	0/0:3,0:3:6.02:0,6,89	0/0:2,0:2:6.02:0,6,83	0/0:7,0:7:15.05:0,15,228	0/0:4,0:4:12.03:0,12,164	0/0:29,0:28:31.66:0,32,480	0/0:6,0:6:15.05:0,15,239	0/0:5,0:5:9.03:0,9,139	0/0:12,0:12:31.66:0,32,469	0/0:5,0:5:9.03:0,9,144	0/0:7,0:7:16.28:0,16,263	0/0:11,0:11:27.09:0,27,410	./.
chr10	100249412	.	GT	G	69.25	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.754;DP=434;FS=0.000;HRun=1;HaplotypeScore=64.1050;InbreedingCoeff=0.8095;MQ=84.22;MQ0=0;MQRankSum=-4.550;QD=4.62;ReadPosRankSum=-1.819;VQSLOD=-0.5035;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,11:15:22.85:162,23,0	0/0:2,0:2:6.02:0,6,96	0/0:22,0:22:63.19:0,63,964	0/0:21,0:21:48.63:0,49,736	0/0:9,0:9:21.07:0,21,336	0/0:11,0:10:30.10:0,30,479	0/0:26,0:26:60.14:0,60,902	0/0:22,0:22:63.21:0,63,1007	0/0:11,0:11:27.09:0,27,431	0/0:23,0:23:66.18:0,66,1025	0/0:6,0:6:18.06:0,18,288	0/0:8,0:8:24.08:0,24,373	0/0:16,0:16:45.15:0,45,719	0/0:22,0:22:60.20:0,60,958	0/0:10,0:10:27.05:0,27,403	0/0:17,0:17:45.15:0,45,719	0/0:24,0:24:69.23:0,69,1091	0/0:17,0:17:51.17:0,51,815	0/0:14,0:14:39.10:0,39,594	0/0:21,0:21:63.21:0,63,1007	0/0:21,0:21:63.19:0,63,982	0/0:9,0:9:27.09:0,27,427	0/0:14,0:14:42.14:0,42,662	0/0:28,0:27:69.24:0,69,1099	0/0:15,0:15:42.14:0,42,671	0/0:20,0:20:60.20:0,60,959	0/0:8,0:8:24.08:0,24,381	0/0:2,0:2:6.02:0,6,96
chr10	100249414	.	ACACACATCTG	A	614.40	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.851;DP=425;FS=1.371;HRun=0;HaplotypeScore=133.1355;InbreedingCoeff=0.8093;MQ=82.67;MQ0=0;MQRankSum=-3.869;QD=43.89;ReadPosRankSum=-2.441;VQSLOD=2.9635;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,11:14:27.09:708,27,0	0/0:2,0:2:6.02:0,6,330	0/0:21,0:21:63.08:0,63,2754	0/0:19,0:20:59.23:0,59,2520	0/0:9,0:9:21.07:0,21,1153	0/0:12,0:11:33.11:0,33,1714	0/0:23,0:23:54.19:0,54,2682	0/0:23,0:23:66.23:0,66,3622	0/0:11,0:11:27.09:0,27,1293	0/0:21,0:21:57.20:0,57,2771	0/0:6,0:6:18.06:0,18,898	0/0:8,0:8:24.08:0,24,1312	0/0:16,0:16:45.15:0,45,2470	0/0:22,0:22:60.21:0,60,2963	0/0:10,0:10:24.08:0,24,1317	0/0:17,0:17:45.15:0,45,2339	0/0:24,0:24:69.20:0,69,3129	0/0:17,0:17:51.17:0,51,2567	0/0:15,0:15:42.13:0,42,1969	0/0:21,0:21:63.22:0,63,3276	0/0:20,0:20:60.18:0,60,2966	0/0:9,0:9:27.09:0,27,1323	0/0:13,0:13:39.11:0,39,1785	0/0:27,0:26:66.21:0,66,3199	0/0:15,0:15:42.14:0,42,2070	0/0:20,0:20:60.21:0,60,3056	0/0:7,0:7:21.07:0,21,1152	0/0:2,0:2:6.02:0,6,329
chr10	100249508	.	G	GA	137.74	PASS	AB=0.878;AC=9;AF=0.167;AN=54;BaseQRankSum=6.006;DP=217;FS=0.000;HRun=0;HaplotypeScore=84.1502;InbreedingCoeff=-0.0516;MQ=58.27;MQ0=9;MQRankSum=-2.858;QD=2.30;ReadPosRankSum=1.475;VQSLOD=2.1840;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:11.80:0,12,122	./.	0/1:13,0:5:3.98:4,0,21	0/0:16,0:11:17.62:0,18,190	0/0:2,1:2:3.01:0,3,42	0/1:13,0:13:33.78:34,0,44	0/0:12,4:16:10.94:0,11,160	0/0:5,0:4:8.98:0,9,81	0/0:3,0:3:0.33:0,0,1	0/0:4,3:5:0.44:0,0,115	0/0:5,0:5:5.71:0,6,83	0/0:11,1:12:5.33:0,5,192	0/1:3,2:4:31.56:32,0,75	0/0:2,0:2:3.01:0,3,42	0/0:6,0:6:12.04:0,12,163	0/1:6,2:8:32.58:33,0,63	0/0:14,0:13:7.60:0,8,328	0/0:5,0:5:5.89:0,6,61	0/0:9,0:9:21.04:0,21,272	0/0:7,1:8:11.73:0,12,165	0/0:7,0:5:8.53:0,9,85	0/1:5,1:3:9.47:9,0,36	0/0:5,2:6:8.92:0,9,110	0/0:12,1:12:20.87:0,21,293	1/1:4,0:4:2.66:11,3,0	0/1:5,2:7:99:103,0,107	0/1:4,0:3:34.75:35,0,75	0/0:2,0:2:0:0,0,0
chr10	100249510	.	GGA	G	407.79	PASS	AB=0.938;AC=18;AF=0.333;AN=54;BaseQRankSum=1.137;DP=219;FS=5.473;HRun=0;HaplotypeScore=76.3720;InbreedingCoeff=0.4793;MQ=58.13;MQ0=8;MQRankSum=-3.352;QD=5.83;ReadPosRankSum=-1.504;VQSLOD=2.1267;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:11.87:0,12,171	./.	0/0:14,0:5:8.63:0,9,69	0/0:18,0:12:15.80:0,16,195	0/0:3,0:2:3.01:0,3,50	1/1:12,2:14:1.31:49,1,0	1/1:9,7:15:16.52:137,17,0	1/1:3,2:4:8.99:96,9,0	1/1:3,0:3:1.87:5,2,0	0/0:7,0:5:0.27:0,0,139	0/0:5,0:5:8.98:0,9,110	0/0:11,0:11:1.10:0,1,249	0/1:5,0:4:0.02:0,0,110	0/0:3,0:3:5.38:0,5,57	0/0:7,0:7:14.99:0,15,196	1/1:5,3:8:3.71:90,4,0	0/0:14,0:13:30.03:0,30,431	0/1:6,1:7:29.83:63,0,30	0/0:8,0:8:18.01:0,18,242	0/0:7,0:7:12.01:0,12,193	1/1:3,3:5:8.81:95,9,0	0/0:6,0:3:3.01:0,3,50	0/0:7,0:6:9.03:0,9,145	0/0:13,0:12:21.05:0,21,323	1/1:4,0:4:0.47:1,0,0	0/0:6,0:6:7.49:0,7,45	0/0:4,0:3:8.24:0,8,106	1/1:2,0:2:2.98:21,3,0
chr10	100249521	.	GACAA	G	138.13	PASS	AB=0.885;AC=11;AF=0.204;AN=54;BaseQRankSum=4.559;DP=192;FS=2.128;HRun=0;HaplotypeScore=72.1966;InbreedingCoeff=-0.0327;MQ=69.28;MQ0=6;MQRankSum=-2.632;QD=2.09;ReadPosRankSum=1.445;VQSLOD=1.2711;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:24.60:0,25,394	./.	0/0:16,0:7:17.05:0,17,190	0/1:20,0:13:22.50:23,0,575	0/0:1,0:1:3.01:0,3,84	0/1:10,1:10:19.49:19,0,134	0/0:12,0:11:0.92:0,1,247	0/0:6,0:5:9.01:0,9,106	1/1:2,0:2:2.04:6,2,0	0/1:5,0:5:15.54:16,0,283	0/0:4,0:4:9.03:0,9,243	0/1:8,0:8:10.44:10,0,474	0/1:4,1:5:43.57:44,0,186	0/0:2,0:2:5.69:0,6,95	0/0:7,0:7:18.06:0,18,447	0/1:6,0:6:8.10:8,0,107	0/0:12,0:11:30.10:0,30,830	0/0:7,0:7:15.52:0,16,258	0/0:10,0:10:24.04:0,24,504	0/0:6,0:6:14.78:0,15,320	0/0:3,0:3:9.03:0,9,133	0/0:4,1:3:4.26:0,4,86	0/0:6,0:6:9.03:0,9,243	0/0:11,0:11:18.53:0,19,513	0/1:1,1:2:0.12:0,0,0	0/1:2,1:3:0.05:94,0,0	0/1:3,1:3:46.76:47,0,159	0/0:2,0:2:3.01:0,3,34
chr10	100249555	.	GGA	G	323.57	PASS	AB=1.000;AC=23;AF=0.719;AN=32;BaseQRankSum=-2.050;DP=52;FS=7.404;HRun=0;HaplotypeScore=17.3015;InbreedingCoeff=0.2441;MQ=67.19;MQ0=1;MQRankSum=-2.497;QD=8.99;ReadPosRankSum=-0.335;VQSLOD=1.4332;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:2:0.89:0,1,2	./.	0/0:2,0:3:5.17:0,5,21	0/1:5,0:3:7.14:32,0,7	1/1:0,3:3:5.96:54,6,0	1/1:0,3:3:7.54:53,8,0	1/1:1,3:4:8.98:73,9,0	0/0:0,1:1:0:0,0,0	1/1:0,3:3:3:26,3,0	0/0:0,1:1:2.04:0,2,6	1/1:0,2:2:3:25,3,0	./.	./.	1/1:0,2:3:1.71:4,2,0	1/1:0,3:2:2.99:24,3,0	1/1:1,0:1:2.99:23,3,0	1/1:0,4:4:5.99:49,6,0	1/1:0,1:1:3.01:39,3,0	1/1:1,1:2:2.90:16,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	100249875	.	GA	G	480.14	PASS	AB=0.948;AC=19;AF=0.396;AN=48;BaseQRankSum=2.069;DP=112;FS=0.000;HRun=1;HaplotypeScore=41.9403;InbreedingCoeff=-0.1777;MQ=35.37;MQ0=6;MQRankSum=-0.603;QD=7.17;ReadPosRankSum=-1.512;VQSLOD=-0.0018;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:7:27.36:27,0,59	1/1:2,0:2:5.98:57,6,0	./.	0/0:11,0:3:5.96:0,6,47	./.	0/1:3,0:3:27.19:27,0,76	1/1:1,0:1:2.90:16,3,0	0/0:4,0:3:6.02:0,6,88	0/1:5,1:6:38.73:47,0,39	0/0:3,0:2:5.99:0,6,67	./.	0/1:4,0:4:22.86:29,0,23	0/1:4,0:4:3.46:31,0,3	0/1:5,0:4:30.06:30,0,42	0/1:6,0:6:10.16:34,0,10	0/1:7,0:7:63.90:64,0,94	0/0:3,0:3:5.14:0,5,35	1/1:1,0:1:2.90:16,3,0	0/0:2,0:1:2.99:0,3,24	0/1:4,0:4:12.90:29,0,13	0/0:4,1:5:0.08:0,0,11	0/1:4,1:5:48.08:81,0,48	1/1:5,0:5:9.03:108,9,0	0/0:2,0:2:3.35:0,3,16	0/1:5,1:6:23.80:24,0,108	0/0:4,1:5:8.72:0,9,102	./.	0/0:2,0:1:2.37:0,2,8
chr10	100249910	.	GGAGAGA	G	363.11	PASS	AB=0.892;AC=12;AF=0.240;AN=50;BaseQRankSum=2.003;DP=271;FS=3.596;HRun=0;HaplotypeScore=78.6883;InbreedingCoeff=0.2902;MQ=34.22;MQ0=23;MQRankSum=-3.334;QD=6.15;ReadPosRankSum=0.892;VQSLOD=1.2934;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:15:15.05:0,15,344	0/0:6,0:6:5.98:0,6,75	./.	./.	0/1:9,0:9:0:0,0,0	1/1:5,0:4:3.01:62,3,0	0/1:4,2:6:62.33:62,0,89	./.	1/1:6,1:6:2.74:63,3,0	0/0:14,0:13:27.06:0,27,656	0/0:7,0:8:9.03:0,9,277	0/0:6,0:6:3.01:0,3,97	0/0:7,0:7:9.45:0,9,156	0/0:6,0:4:3.01:0,3,56	0/0:9,0:9:6.02:0,6,196	1/1:8,0:8:3.01:41,3,0	0/0:5,0:5:9.92:0,10,254	0/1:3,0:3:7.28:7,0,30	0/0:5,0:6:15.05:0,15,250	0/0:10,0:10:2.63:0,3,38	1/1:8,2:9:8.68:150,9,0	0/0:16,0:14:12.03:0,12,391	0/0:9,0:9:3.01:0,3,96	0/0:12,0:11:20.80:0,21,593	0/0:12,0:12:6.02:0,6,198	0/1:9,1:10:70.85:109,0,71	0/0:3,0:5:11.19:0,11,87	0/0:4,0:2:1.55:0,2,4
chr10	100251154	.	T	TACAC	6619.07	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=-7.944;DP=558;FS=0.000;HRun=0;HaplotypeScore=95.1191;InbreedingCoeff=0.8111;MQ=61.55;MQ0=6;MQRankSum=-0.719;QD=23.98;ReadPosRankSum=-1.917;VQSLOD=4.3317;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:26:5.16:104,5,0	0/0:7,0:7:12.03:0,12,170	0/1:25,0:19:36.21:36,0,42	0/1:10,0:7:10.13:10,0,31	0/0:15,0:16:23.57:0,24,516	1/1:4,13:20:24.07:579,24,0	1/1:12,11:26:26.82:543,27,0	1/1:28,10:42:59.71:987,60,0	1/1:6,12:20:30.10:723,30,0	0/0:25,0:27:36.07:0,36,514	0/0:22,0:22:48.10:0,48,675	0/0:14,0:16:33.07:0,33,463	0/0:23,0:23:45.10:0,45,671	0/0:20,0:20:36.09:0,36,513	1/1:7,21:28:45.15:1085,45,0	1/1:3,4:9:5.75:144,6,0	0/0:24,0:24:33.12:0,33,554	1/1:5,5:11:12.04:266,12,0	0/0:16,0:16:20.19:0,20,316	0/0:23,0:23:39.12:0,39,602	1/1:8,14:22:24.08:567,24,0	0/0:11,0:10:15.02:0,15,214	0/0:14,0:14:18.04:0,18,250	0/0:20,0:20:32.56:0,33,506	0/0:14,0:15:33.10:0,33,511	1/1:8,18:30:71.27:1215,71,0	0/0:27,0:27:63.13:0,63,913	1/1:1,5:6:15.05:361,15,0
chr10	100255060	.	C	CTTT	3167.31	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=1.890;DP=521;FS=2.891;HRun=13;HaplotypeScore=89.6437;InbreedingCoeff=0.8025;MQ=74.87;MQ0=0;MQRankSum=-0.148;QD=14.33;ReadPosRankSum=-5.613;VQSLOD=0.8211;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:25:34.56:251,35,0	0/0:9,0:9:17.86:0,18,193	0/0:10,0:10:12.61:0,13,89	0/1:15,0:15:24.89:25,0,68	0/0:23,0:27:49.03:0,49,502	1/1:3,1:24:25.57:201,26,0	1/1:6,8:15:18.04:291,18,0	1/1:18,6:28:35.06:443,35,0	1/1:3,7:13:24.06:379,24,0	0/0:30,0:30:44.46:0,44,484	0/0:17,0:19:32.81:0,33,326	0/0:20,0:20:26.08:0,26,289	0/0:15,0:18:22.15:0,22,255	0/1:19,0:20:3.39:3,0,186	0/0:14,0:17:32.61:0,33,326	1/1:6,9:19:33.05:424,33,0	0/0:21,0:23:8.22:0,8,298	1/1:5,1:9:6.02:96,6,0	0/0:16,0:19:4.55:0,5,279	0/0:23,0:24:17.81:0,18,396	1/1:6,0:5:6.02:90,6,0	0/0:11,0:13:22.36:0,22,241	0/0:11,0:13:22.37:0,22,256	0/0:12,0:12:17.76:0,18,193	0/0:19,0:19:38.87:0,39,420	1/1:8,7:30:21.55:827,22,0	0/0:26,0:27:44.50:0,44,461	1/1:2,8:17:27.01:347,27,0
chr10	100256169	.	T	TCTAA	1765.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.313;DP=653;FS=2.601;HRun=0;HaplotypeScore=103.7255;InbreedingCoeff=0.9953;MQ=82.45;MQ0=1;MQRankSum=-4.773;QD=58.86;ReadPosRankSum=0.760;VQSLOD=5.4670;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,23:30:72.20:1861,72,0	0/0:12,0:12:36.12:0,36,685	0/0:26,0:25:33.93:0,34,1089	0/0:20,0:20:51.13:0,51,915	0/0:30,0:30:90.31:0,90,1725	0/0:25,0:25:69.24:0,69,1304	0/0:26,0:26:69.20:0,69,1257	0/0:27,0:27:69.24:0,69,1320	0/0:20,0:20:57.20:0,57,1105	0/0:25,0:25:75.26:0,75,1442	0/0:28,0:28:81.24:0,81,1437	0/0:22,0:22:63.22:0,63,1222	0/0:20,0:20:57.18:0,57,1067	0/0:25,0:25:72.22:0,72,1336	0/0:30,0:30:90.30:0,90,1703	0/0:31,0:31:87.30:0,87,1678	0/0:32,0:32:93.32:0,93,1793	0/0:14,0:14:42.14:0,42,814	0/0:12,0:12:36.12:0,36,680	0/0:36,0:36:99:0,99,1919	0/0:19,0:19:54.19:0,54,1006	0/0:20,0:20:57.18:0,57,1072	0/0:19,0:19:51.17:0,51,978	0/0:24,0:24:69.24:0,69,1318	0/0:12,0:12:36.12:0,36,689	0/0:25,0:25:72.25:0,72,1390	0/0:36,0:36:99:0,105,1961	0/0:7,0:7:21.04:0,21,371
chr10	100257223	.	TTCTCTCTCTCTCTCTCTCTCTC	T	1212.98	PASS	AB=0.937;AC=9;AF=0.188;AN=48;BaseQRankSum=-0.090;DP=510;FS=3.452;HRun=0;HaplotypeScore=258.7036;InbreedingCoeff=0.2977;MQ=79.92;MQ0=22;MQRankSum=-0.411;QD=10.11;ReadPosRankSum=0.030;VQSLOD=2.4188;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:19.88:0,20,1233	0/0:9,0:9:12.04:0,12,628	./.	0/0:43,0:26:4.35:0,4,12	0/0:19,0:21:6.02:0,6,224	1/1:11,4:17:3.01:171,3,0	./.	1/1:33,0:31:8.97:133,9,0	1/1:13,2:15:3.01:97,3,0	0/0:18,0:17:29.46:0,29,1600	0/0:9,0:10:3.01:0,3,50	0/0:11,0:11:15.05:0,15,724	0/0:19,0:19:12.04:0,12,479	0/0:6,0:5:9.03:0,9,547	0/0:11,0:11:18.06:0,18,731	./.	0/0:23,0:22:33.10:0,33,1552	0/1:16,0:15:99:184,0,223	0/0:21,0:24:23.29:0,23,822	0/0:16,0:16:5.23:0,5,155	0/1:21,0:19:10.82:87,0,11	0/0:13,0:13:9.03:0,9,484	0/0:20,0:20:12.03:0,12,472	0/0:27,0:24:21.07:0,21,1097	0/0:21,0:21:6.02:0,6,391	0/1:13,4:15:99:670,0,283	0/0:11,0:11:3.01:0,3,195	./.
chr10	100257860	.	G	GT	3140.31	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-12.275;DP=473;FS=1.407;HRun=10;HaplotypeScore=51.0706;InbreedingCoeff=0.8835;MQ=76.72;MQ0=0;MQRankSum=-1.123;QD=21.08;ReadPosRankSum=-1.564;VQSLOD=4.0109;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:50.92:0,51,418	0/0:12,0:12:20.95:0,21,172	0/0:15,0:15:27.92:0,28,213	0/0:7,0:7:5.89:0,6,69	0/0:14,0:14:32.94:0,33,271	1/1:4,10:14:21.05:224,21,0	1/1:1,11:12:27.07:288,27,0	1/1:13,26:39:72.14:750,72,0	1/1:0,11:12:32.95:334,33,0	0/0:16,1:19:4.24:0,4,242	0/0:20,0:21:52.97:0,53,425	0/0:19,0:19:44.91:0,45,369	0/0:23,0:24:64.95:0,65,523	0/0:12,1:13:0.96:0,1,214	0/0:20,0:20:56.92:0,57,468	1/1:1,15:17:38.93:398,39,0	0/0:16,0:16:44.91:0,45,365	1/1:5,8:13:23.06:218,23,0	0/0:10,0:11:19.98:0,20,153	0/0:22,0:23:52.95:0,53,425	1/1:0,9:9:24.06:256,24,0	0/0:9,1:11:0.02:0,0,196	0/0:13,0:14:31.97:0,32,252	0/0:9,0:9:20.96:0,21,172	0/0:21,0:21:55.49:0,55,447	1/1:1,23:26:40.51:655,41,0	0/0:33,0:35:61.98:0,62,694	1/1:0,7:7:21.05:224,21,0
chr10	100260094	.	TATAA	T	931.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.582;DP=665;FS=1.873;HRun=0;HaplotypeScore=117.9237;InbreedingCoeff=0.9929;MQ=83.07;MQ0=0;MQRankSum=-4.393;QD=35.83;ReadPosRankSum=2.006;VQSLOD=3.9028;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:57.19:1027,57,0	0/0:7,0:7:21.04:0,21,502	0/0:24,0:24:60.21:0,60,1481	0/0:14,0:14:27.13:0,27,871	0/0:26,0:26:75.26:0,75,1925	0/0:32,0:32:96.32:0,96,2447	0/0:28,0:28:78.27:0,78,2033	0/0:38,0:38:99:0,108,2746	0/0:27,0:27:78.27:0,78,2019	0/0:32,0:32:93.32:0,93,2453	0/0:26,0:26:75.26:0,75,1951	0/0:24,0:24:72.25:0,72,1885	0/0:31,0:31:84.27:0,84,2175	0/0:19,0:19:57.20:0,57,1513	0/0:17,0:17:48.16:0,48,1227	0/0:30,0:30:90.31:0,90,2394	0/0:20,0:20:60.17:0,60,1519	0/0:19,0:19:54.19:0,54,1436	0/0:14,0:14:39.13:0,39,1041	0/0:35,0:35:93.32:0,93,2431	0/0:24,0:24:66.23:0,66,1728	0/0:30,0:30:81.28:0,81,2072	0/0:15,0:15:45.14:0,45,1115	0/0:10,0:10:27.09:0,27,681	0/0:31,0:31:90.29:0,90,2337	0/0:29,0:29:84.25:0,84,2128	0/0:26,0:25:75.26:0,75,2000	0/0:11,0:11:27.09:0,27,720
chr10	100260903	.	CTT	C	8220.83	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.978;DP=667;FS=2.240;HRun=3;HaplotypeScore=77.7580;InbreedingCoeff=0.9982;MQ=90.10;MQ0=0;MQRankSum=-1.546;QD=40.70;ReadPosRankSum=1.761;VQSLOD=4.5584;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1986	0/0:9,0:9:27.09:0,27,522	0/0:29,0:29:87.18:0,87,1575	0/0:22,0:22:57.13:0,57,967	0/0:33,0:33:99:0,99,1900	1/1:1,30:31:72.24:1102,72,0	1/1:0,19:19:48.16:735,48,0	1/1:1,27:28:81.27:1239,81,0	1/1:1,25:26:63.21:964,63,0	0/0:27,0:27:81.27:0,81,1534	0/0:24,0:24:69.22:0,69,1267	0/0:20,0:20:60.21:0,60,1159	0/0:32,0:32:96.29:0,96,1763	0/0:26,0:26:75.26:0,75,1449	0/0:22,0:22:66.23:0,66,1267	1/1:0,19:19:48.16:735,48,0	0/0:29,0:29:87.30:0,87,1681	1/1:0,6:6:18.06:276,18,0	0/0:15,0:15:42.14:0,42,812	0/0:21,0:21:60.20:0,60,1129	1/1:1,34:35:96.33:1469,96,0	0/0:13,0:13:39.13:0,39,754	0/0:30,0:30:90.31:0,90,1739	0/0:24,0:24:72.25:0,72,1391	0/0:18,0:18:54.19:0,54,1044	1/1:1,29:30:87.30:1333,87,0	0/0:36,0:35:99:0,108,1929	1/1:0,8:8:24.08:367,24,0
chr10	100261011	.	G	GCA	1810.61	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.697;DP=666;FS=11.182;HRun=0;HaplotypeScore=99.4268;InbreedingCoeff=0.9952;MQ=89.13;MQ0=0;MQRankSum=-5.029;QD=43.11;ReadPosRankSum=-0.241;VQSLOD=4.6632;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,40:42:99:1905,102,0	0/0:13,0:13:39.13:0,39,574	0/0:26,0:26:72.24:0,72,1028	0/0:24,0:24:69.21:0,69,986	0/0:38,0:38:99:0,111,1611	0/0:18,0:18:51.15:0,51,728	0/0:20,0:20:60.20:0,60,881	0/0:27,0:27:78.22:0,78,1125	0/0:24,0:24:69.22:0,69,997	0/0:19,0:19:51.17:0,51,735	0/0:20,0:20:54.17:0,54,775	0/0:15,0:15:45.15:0,45,663	0/0:25,0:25:75.25:0,75,1104	0/0:25,0:25:69.23:0,69,1015	0/0:27,0:27:78.24:0,78,1110	0/0:26,0:26:78.21:0,78,1088	0/0:25,0:25:69.23:0,69,1011	0/0:10,0:10:30.10:0,30,442	0/0:15,0:15:42.13:0,42,599	0/0:27,0:27:78.24:0,78,1110	0/0:27,0:27:75.23:0,75,1068	0/0:31,0:31:87.27:0,87,1259	0/0:19,0:19:36.12:0,36,531	0/0:16,0:16:48.16:0,48,703	0/0:43,0:43:99:0,114,1678	0/0:27,0:27:78.24:0,78,1097	0/0:30,0:30:90.29:0,90,1305	0/0:7,0:7:21.07:0,21,309
chr10	100261491	.	CGACT	C	1664.06	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.964;DP=537;FS=0.668;HRun=0;HaplotypeScore=88.2988;InbreedingCoeff=0.9643;MQ=72.16;MQ0=0;MQRankSum=-4.186;QD=41.60;ReadPosRankSum=-0.034;VQSLOD=3.7366;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,36:38:96.80:1759,97,0	0/0:7,0:7:21.07:0,21,543	0/0:22,0:20:49.26:0,49,1213	0/0:25,0:23:60.20:0,60,1507	0/0:10,0:10:30.10:0,30,757	0/0:17,0:17:48.16:0,48,1258	0/0:17,0:17:48.16:0,48,1242	0/0:13,0:13:36.11:0,36,900	0/0:20,0:20:51.18:0,51,1358	0/0:15,0:15:42.14:0,42,1095	0/0:17,0:17:45.15:0,45,1165	0/0:20,0:20:57.20:0,57,1455	0/0:20,0:20:60.21:0,60,1574	0/0:23,0:23:66.23:0,66,1673	0/0:30,0:29:84.29:0,84,2240	0/0:12,0:12:36.12:0,36,955	0/0:34,0:34:99:0,102,2674	0/0:13,0:13:36.12:0,36,946	0/0:17,0:17:45.15:0,45,1184	0/0:14,0:14:39.12:0,39,984	0/0:53,0:53:99:0,151,3974	0/0:15,0:15:39.13:0,39,1040	0/0:13,0:13:33.11:0,33,852	0/0:19,0:19:57.20:0,57,1520	0/0:17,0:17:45.15:0,45,1166	0/0:18,0:18:54.19:0,54,1438	0/0:11,0:11:27.09:0,27,675	0/0:4,0:4:12.04:0,12,320
chr10	100262358	.	CCGCCGCTCCTTTTTGCTT	C	1270.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.392;DP=667;FS=21.859;HRun=0;HaplotypeScore=315.0648;InbreedingCoeff=0.8482;MQ=78.90;MQ0=0;MQRankSum=-5.349;QD=24.43;ReadPosRankSum=2.235;VQSLOD=0.6584;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,29:52:28.34:1364,28,0	0/0:10,0:10:24.04:0,24,1396	0/0:22,0:22:42.11:0,42,1922	0/0:15,0:15:39.03:0,39,2322	0/0:26,0:26:62.68:0,63,4495	0/0:16,0:16:30.06:0,30,1918	0/0:17,0:17:39.12:0,39,2553	0/0:29,0:29:48.16:0,48,2913	0/0:24,0:24:60.19:0,60,4551	0/0:22,0:22:54.19:0,54,3883	0/0:16,0:16:38.26:0,38,2767	0/0:24,0:24:51.10:0,51,3112	0/0:18,0:18:45.15:0,45,3582	0/0:25,0:25:54.19:0,54,3956	0/0:35,0:35:81.26:0,81,5990	0/0:32,0:32:84.22:0,84,5737	0/0:41,0:41:99:0,108,7564	0/0:25,0:25:66.10:0,66,4557	0/0:24,0:24:48.16:0,48,3500	0/0:14,0:14:36.12:0,36,2581	0/0:29,0:29:57.14:0,57,4105	0/0:24,0:24:55.39:0,55,3402	0/0:17,0:17:45.14:0,45,3120	0/0:30,0:30:78.27:0,78,5911	0/0:18,0:18:39.13:0,39,2830	0/0:29,0:29:66.21:0,66,5019	0/0:30,0:30:75.24:0,75,4722	0/0:3,0:3:3:0,3,25
chr10	100262830	.	C	CT	421.55	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.328;DP=539;FS=2.056;HRun=8;HaplotypeScore=58.5403;InbreedingCoeff=0.9608;MQ=77.72;MQ0=3;MQRankSum=-1.095;QD=18.33;ReadPosRankSum=0.491;VQSLOD=3.5077;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:23:45.13:516,45,0	0/0:5,0:5:12:0,12,110	0/0:32,0:19:35.14:0,35,286	0/0:40,0:27:22.12:0,22,360	0/0:27,0:27:66.01:0,66,600	0/0:27,0:27:75.02:0,75,681	0/0:12,0:12:32.99:0,33,293	0/0:22,0:22:41.99:0,42,376	0/0:8,0:8:21.01:0,21,192	0/0:33,0:33:87.04:0,87,796	0/0:18,0:18:48.03:0,48,439	0/0:15,0:15:38.92:0,39,345	0/0:16,0:16:48.03:0,48,439	0/0:15,0:15:37.71:0,38,348	0/0:19,0:19:57.03:0,57,522	0/0:14,0:14:33.01:0,33,302	0/0:28,0:28:78.04:0,78,714	0/0:14,0:14:38.99:0,39,349	0/0:28,0:28:69.03:0,69,628	0/0:15,0:15:45.02:0,45,412	0/0:10,0:10:27.01:0,27,247	0/0:18,0:18:48.01:0,48,435	0/0:14,0:14:42.01:0,42,380	0/0:15,0:15:39:0,39,350	0/0:21,0:21:60.03:0,60,547	0/0:21,0:21:54.02:0,54,491	0/0:19,0:19:51.03:0,51,466	0/0:10,0:10:30.02:0,30,275
chr10	100264071	.	A	AG	1446.21	PASS	AB=0.771;AC=12;AF=0.214;AN=56;BaseQRankSum=11.216;DP=633;FS=0.455;HRun=0;HaplotypeScore=118.7596;InbreedingCoeff=0.3559;MQ=88.04;MQ0=0;MQRankSum=-11.092;QD=8.82;ReadPosRankSum=3.238;VQSLOD=3.7325;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1593	0/0:5,0:5:15.05:0,15,210	0/0:25,0:25:72.24:0,72,1007	0/0:25,0:25:69.19:0,69,933	0/0:27,0:27:81.27:0,81,1130	0/1:12,10:22:5.88:216,0,6	0/1:6,10:16:45.18:153,0,45	0/1:32,0:32:54.64:55,0,952	1/1:11,13:24:28.40:349,28,0	0/0:22,0:22:66.22:0,66,911	0/0:24,0:24:72.24:0,72,1007	0/0:26,0:26:78.25:0,78,1076	0/0:31,0:31:93.30:0,93,1286	0/0:19,0:19:57.19:0,57,796	0/0:26,0:26:78.25:0,78,1074	1/1:8,14:22:13.64:307,14,0	0/0:32,0:32:93.31:0,93,1300	0/1:5,1:6:55.90:56,0,57	0/0:25,0:25:75.24:0,75,1034	0/0:23,0:23:66.21:0,66,906	1/1:5,2:7:5.98:47,6,0	0/0:26,0:26:78.25:0,78,1075	0/0:21,0:21:57.19:0,57,797	0/0:20,0:20:60.20:0,60,839	0/0:18,0:18:54.18:0,54,755	0/1:12,8:20:99:252,0,260	0/0:34,0:34:99:0,102,1426	0/1:10,5:15:99:176,0,102
chr10	100264072	.	A	AGAGAGTCACACTCAC	24231.93	PASS	AB=0.741;AC=17;AF=0.304;AN=56;BaseQRankSum=11.744;DP=639;FS=0.717;HRun=0;HaplotypeScore=263.6394;InbreedingCoeff=0.9006;MQ=88.26;MQ0=0;MQRankSum=-16.705;QD=146.86;ReadPosRankSum=1.426;VQSLOD=4.4376;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,4876	0/0:5,0:5:15.05:0,15,568	0/0:26,0:26:72.21:0,72,2694	0/0:25,0:25:72.15:0,72,2332	0/0:27,0:27:81.28:0,81,3479	1/1:13,9:22:48.16:2847,48,0	1/1:8,10:18:48.16:3086,48,0	1/1:31,0:31:89.78:4610,90,0	1/1:11,13:24:65.57:3913,66,0	0/0:22,0:22:66.20:0,66,2670	0/0:24,0:24:72.25:0,72,3181	0/0:25,0:25:75.26:0,75,3024	0/0:31,0:31:93.26:0,93,3844	0/0:19,0:19:57.14:0,57,2113	0/0:25,0:25:75.21:0,75,3035	1/1:7,14:21:60.19:3723,60,0	0/0:32,0:32:96.28:0,96,4027	1/1:5,1:6:15.04:628,15,0	0/0:29,0:29:75.23:0,75,2759	0/0:23,0:23:66.22:0,66,2782	1/1:6,2:8:9.03:613,9,0	0/0:26,0:26:78.21:0,78,2855	0/0:21,0:21:60.19:0,60,2382	0/0:21,0:21:60.18:0,60,2538	0/0:19,0:19:54.19:0,54,2438	0/1:13,7:20:86.11:2863,0,86	0/0:34,0:34:99:0,102,4224	1/1:10,5:15:39.05:1949,39,0
chr10	100264110	.	C	CT	1350.53	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.291;DP=647;FS=16.804;HRun=2;HaplotypeScore=96.4207;InbreedingCoeff=0.9639;MQ=93.35;MQ0=0;MQRankSum=-1.739;QD=36.50;ReadPosRankSum=1.028;VQSLOD=1.9812;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:37:99:1445,102,0	0/0:4,0:4:12.04:0,12,149	0/0:31,0:30:77.84:0,78,875	0/0:29,0:29:69.84:0,70,794	0/0:27,0:27:81.24:0,81,991	0/0:29,0:29:84.26:0,84,1039	0/0:16,0:16:42.06:0,42,485	0/0:34,0:34:96.28:0,96,1166	0/0:26,0:26:72.23:0,72,891	0/0:22,0:22:66.19:0,66,796	0/0:22,0:22:63.20:0,63,781	0/0:24,0:24:72.23:0,72,892	0/0:26,0:26:78.25:0,78,967	0/0:24,0:24:66.18:0,66,794	0/0:26,0:26:72.23:0,72,892	0/0:21,0:21:60.19:0,60,737	0/0:26,0:26:69.22:0,69,854	0/0:7,0:7:21.07:0,21,260	0/0:21,0:21:60.18:0,60,733	0/0:27,0:27:78.18:0,78,948	0/0:15,0:15:39.12:0,39,483	0/0:24,0:24:69.22:0,69,855	0/0:24,0:24:72.18:0,72,870	0/0:22,0:22:63.20:0,63,781	0/0:17,0:17:51.16:0,51,631	0/0:23,0:23:63.20:0,63,777	0/0:31,0:31:87.26:0,87,1065	0/0:12,0:12:22.82:0,23,295
chr10	100264880	.	TG	T	292.89	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=5.812;DP=627;FS=4.601;HRun=2;HaplotypeScore=68.1861;InbreedingCoeff=0.6804;MQ=66.10;MQ0=0;MQRankSum=-1.724;QD=12.73;ReadPosRankSum=-0.972;VQSLOD=2.0582;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:30.10:386,30,0	0/1:7,0:7:8.12:8,0,244	0/0:25,1:22:46.28:0,46,718	0/0:23,0:20:48.13:0,48,480	0/0:29,0:29:79.87:0,80,1076	0/0:19,0:19:47.87:0,48,577	0/0:14,0:14:39.06:0,39,513	0/0:40,0:40:99:0,116,1434	0/0:15,0:15:30.10:0,30,436	0/0:39,0:39:99:0,117,1637	0/0:30,0:30:90.20:0,90,1238	0/0:23,0:23:69.23:0,69,1012	0/0:14,0:14:42:0,42,548	0/0:21,0:21:63.11:0,63,854	0/0:15,0:15:35.41:0,35,528	0/0:22,0:22:45.03:0,45,621	0/0:34,0:35:82.36:0,82,1311	0/0:18,0:18:33.70:0,34,586	0/0:24,0:23:68.23:0,68,872	0/0:33,0:33:99:0,99,1347	0/0:18,0:18:47.74:0,48,653	0/0:20,0:20:60.10:0,60,829	0/0:18,0:18:54.07:0,54,767	0/0:18,0:18:49.36:0,49,684	0/0:25,0:25:75.23:0,75,1064	0/0:24,0:24:72.08:0,72,992	0/0:27,0:26:60.48:0,60,986	0/0:14,0:14:42.14:0,42,618
chr10	100264949	.	GTTTTTGTTT	G	3680.31	PASS	AB=0.632;AC=15;AF=0.278;AN=54;BaseQRankSum=6.763;DP=669;FS=4.513;HRun=0;HaplotypeScore=195.0122;InbreedingCoeff=0.8258;MQ=51.14;MQ0=28;MQRankSum=-2.689;QD=23.00;ReadPosRankSum=3.386;VQSLOD=2.6576;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:16:4.70:0,5,396	0/0:10,0:10:20.82:0,21,292	0/0:32,0:10:1.26:0,1,127	0/0:47,0:11:12.78:0,13,209	0/0:33,0:30:71.83:0,72,1116	1/1:0,11:17:35.76:629,36,0	1/1:3,6:12:14.90:236,15,0	1/1:8,0:30:10.14:327,10,0	1/1:5,0:21:36.03:723,36,0	0/0:29,0:28:70.64:0,71,1579	0/0:25,0:25:68.72:0,69,1173	0/0:20,0:19:47.52:0,48,681	0/0:27,0:26:70.61:0,71,1645	0/0:25,0:24:56.08:0,56,1124	0/0:17,0:17:41.93:0,42,842	1/1:5,17:25:26.23:588,26,0	0/0:29,0:30:73.50:0,73,1770	1/1:5,0:13:11.26:291,11,0	0/0:29,0:26:50.84:0,51,988	0/0:33,0:32:81.76:0,82,1932	0/1:4,7:11:25.49:25,0,75	0/0:27,0:27:71.91:0,72,1584	0/0:20,0:20:51.52:0,52,1361	0/0:23,0:22:38.79:0,39,876	0/0:28,0:25:73.44:0,73,1125	1/1:3,23:25:65.68:862,66,0	0/0:30,0:28:74.72:0,75,1653	./.
chr10	100265507	.	GA	G	424.98	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=6.599;DP=538;FS=5.979;HRun=10;HaplotypeScore=55.8490;InbreedingCoeff=0.6230;MQ=72.69;MQ0=1;MQRankSum=-2.603;QD=9.88;ReadPosRankSum=1.254;VQSLOD=2.1802;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:26:61.06:507,61,0	0/0:13,0:13:36.10:0,36,398	0/1:16,0:16:24.03:24,0,205	0/0:16,0:11:20.77:0,21,171	0/0:27,1:28:46.14:0,46,737	0/0:21,1:22:31.10:0,31,571	0/0:15,0:15:42.11:0,42,464	0/0:35,0:35:72.64:0,73,776	0/0:21,0:21:60.16:0,60,663	0/0:18,0:19:53.98:0,54,578	0/0:19,0:19:51.13:0,51,556	0/0:15,0:15:42.11:0,42,465	0/0:15,0:15:36.10:0,36,398	0/0:28,0:28:69.19:0,69,763	0/0:16,0:16:42.11:0,42,465	0/0:13,1:14:16.03:0,16,394	0/0:26,0:25:69.19:0,69,761	0/0:20,0:20:60.16:0,60,664	0/0:21,0:22:53.96:0,54,569	0/0:20,0:20:56.35:0,56,590	0/0:14,0:14:36.10:0,36,398	0/0:12,0:12:30.08:0,30,332	0/0:17,0:18:47.96:0,48,512	0/0:13,0:13:33.09:0,33,365	0/0:17,1:18:28.09:0,28,538	0/0:28,0:28:75.19:0,75,816	0/0:21,1:22:34.15:0,34,595	0/0:5,0:6:11.08:0,11,160
chr10	100269803	.	CAAAAGAA	C	7416.73	PASS	AB=0.548;AC=16;AF=0.286;AN=56;BaseQRankSum=9.347;DP=510;FS=2.332;HRun=0;HaplotypeScore=127.0239;InbreedingCoeff=0.8053;MQ=75.13;MQ0=1;MQRankSum=-11.424;QD=50.11;ReadPosRankSum=1.788;VQSLOD=4.7928;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:22:27.04:0,27,539	0/0:9,0:9:24.06:0,24,815	0/0:23,0:18:28.19:0,28,722	0/0:18,0:17:38.34:0,38,711	0/0:33,0:33:90.21:0,90,2696	1/1:6,13:20:58.01:1110,58,0	1/1:3,16:19:36.12:897,36,0	1/1:1,21:23:69.04:1278,69,0	0/1:2,9:11:86.27:570,0,86	0/0:22,0:22:63.20:0,63,1992	0/0:18,0:18:51.16:0,51,1758	0/0:14,0:14:39.12:0,39,1267	0/0:16,0:16:42.14:0,42,1464	0/0:11,0:11:33.11:0,33,1153	0/0:18,0:18:51.13:0,51,1472	1/1:2,24:26:57.20:1452,57,0	0/0:21,0:21:51.15:0,51,1814	1/1:1,8:9:11.99:249,12,0	0/0:18,0:18:48.11:0,48,1260	0/0:21,0:21:54.18:0,54,1952	1/1:1,10:11:10.55:246,11,0	0/0:21,0:21:60.19:0,60,1906	0/0:21,0:21:54.16:0,54,1833	0/0:21,0:21:57.19:0,57,2058	0/0:9,0:9:27.09:0,27,871	0/1:4,19:24:99:1308,0,159	0/0:24,0:24:69.20:0,69,2353	1/1:0,5:5:12.04:306,12,0
chr10	100270116	.	CT	C	8069.58	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.672;DP=731;FS=17.666;HRun=2;HaplotypeScore=91.8057;InbreedingCoeff=0.9984;MQ=88.21;MQ0=0;MQRankSum=-4.423;QD=34.05;ReadPosRankSum=-0.580;VQSLOD=2.9618;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.30:0,90,1347	0/0:12,0:12:33.11:0,33,494	0/0:32,0:32:90.23:0,90,1237	0/0:30,0:30:87.02:0,87,1233	0/0:33,0:33:84.16:0,84,1184	1/1:0,26:26:69.22:895,69,0	1/1:0,29:29:75.24:974,75,0	1/1:1,37:38:99:1371,108,0	1/1:4,36:40:84.27:1090,84,0	0/0:20,0:20:57.19:0,57,854	0/0:22,0:22:57.19:0,57,852	0/0:29,0:29:84.24:0,84,1233	0/0:25,0:25:72.24:0,72,1077	0/0:44,0:44:99:0,105,1546	0/0:34,0:34:81.27:0,81,1214	1/1:1,30:31:75.24:973,75,0	0/0:30,0:30:90.29:0,90,1330	1/1:0,6:6:18.06:234,18,0	0/0:21,0:21:63.19:0,63,922	0/0:20,0:20:60.12:0,60,848	1/1:1,34:35:99:1286,99,0	0/0:21,0:21:63.20:0,63,924	0/0:16,0:16:48.13:0,48,695	0/0:26,0:26:66.18:0,66,930	0/0:24,0:24:54.17:0,54,790	1/1:0,24:24:72.23:935,72,0	0/0:21,0:21:63.17:0,63,918	1/1:0,8:8:24.08:312,24,0
chr10	100270349	.	TTA	T	365.57	PASS	AB=0.800;AC=12;AF=0.261;AN=46;BaseQRankSum=2.432;DP=143;FS=6.811;HRun=0;HaplotypeScore=26.0855;InbreedingCoeff=0.6546;MQ=58.60;MQ0=4;MQRankSum=0.021;QD=14.62;ReadPosRankSum=0.362;VQSLOD=1.4850;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:10.98:49,11,0	0/0:9,0:9:24.06:0,24,369	0/0:9,0:6:14.50:0,14,195	0/0:6,0:4:11.87:0,12,134	0/0:14,0:14:38.79:0,39,575	1/1:0,2:2:6.02:88,6,0	1/1:0,3:3:6.02:88,6,0	./.	./.	0/0:7,0:6:18.06:0,18,298	0/0:8,0:8:24.08:0,24,391	0/0:2,0:2:5.95:0,6,67	0/0:3,0:3:6.02:0,6,96	0/1:3,0:3:0:0,0,0	0/0:3,0:3:9.03:0,9,147	1/1:1,2:3:8.82:100,9,0	./.	0/1:1,2:3:8.83:79,0,9	0/0:6,0:2:6.02:0,6,100	0/0:10,0:10:27.08:0,27,444	./.	0/0:4,0:4:12.04:0,12,197	0/0:7,0:7:18.04:0,18,271	0/0:3,0:3:3.01:0,3,50	0/0:7,0:7:21.04:0,21,304	1/1:3,4:5:8.99:108,9,0	0/0:15,0:15:45.07:0,45,669	./.
chr10	100270350	.	TA	T	292.54	PASS	AB=1.000;AC=11;AF=0.250;AN=44;BaseQRankSum=2.855;DP=142;FS=6.811;HRun=1;HaplotypeScore=24.1991;InbreedingCoeff=0.6653;MQ=58.78;MQ0=4;MQRankSum=1.329;QD=13.93;ReadPosRankSum=0.068;VQSLOD=2.2563;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:4:12.04:165,12,0	0/0:9,0:9:24.05:0,24,292	0/0:9,0:6:11.89:0,12,153	0/0:6,0:4:10.78:0,11,100	0/0:14,0:14:38.75:0,39,453	1/1:2,0:2:5.97:44,6,0	1/1:3,0:3:5.97:44,6,0	./.	./.	0/0:7,0:6:18.06:0,18,231	0/0:8,0:8:24.08:0,24,305	0/0:2,0:2:5.95:0,6,56	0/0:4,0:4:6:0,6,72	./.	0/0:3,0:3:9.03:0,9,114	1/1:2,1:3:8.98:86,9,0	./.	0/1:3,0:3:8.84:35,0,9	0/0:6,0:2:6.02:0,6,78	0/0:10,0:10:27.07:0,27,344	./.	0/0:4,0:4:12.04:0,12,153	0/0:7,0:7:18.03:0,18,215	0/0:3,0:3:2.75:0,3,38	0/0:7,0:7:20.97:0,21,231	1/1:6,0:4:8.93:64,9,0	0/0:15,0:15:45:0,45,517	./.
chr10	100274806	.	A	AAT	757.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.387;DP=841;FS=8.181;HRun=0;HaplotypeScore=98.1944;InbreedingCoeff=0.9933;MQ=66.08;MQ0=4;MQRankSum=-0.709;QD=23.68;ReadPosRankSum=0.931;VQSLOD=4.2527;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,24:31:51.17:853,51,0	0/0:10,0:10:24.04:0,24,266	0/0:26,0:20:35.69:0,36,403	0/0:21,0:17:34.19:0,34,354	0/0:30,0:30:74.96:0,75,834	0/0:31,0:30:84.19:0,84,987	0/0:19,0:19:51.08:0,51,579	0/0:39,0:39:90.21:0,90,1040	0/0:40,0:40:99:0,111,1345	0/0:43,0:43:99:0,114,1366	0/0:14,0:14:36:0,36,422	0/0:38,0:38:99:0,111,1352	0/0:37,0:37:99:0,105,1294	0/0:37,0:37:93.14:0,93,1078	0/0:30,0:30:81.23:0,81,1003	0/0:44,0:44:99:0,123,1469	0/0:26,0:26:63.13:0,63,734	0/0:26,0:26:58.99:0,59,751	0/0:18,0:18:35.92:0,36,389	0/0:40,0:40:99:0,111,1324	0/0:45,0:45:99:0,132,1609	0/0:33,0:33:93.10:0,93,1052	0/0:27,0:27:72.18:0,72,871	0/0:25,0:25:66.14:0,66,789	0/0:34,0:34:78.22:0,78,955	0/0:35,0:35:99:0,99,1225	0/0:33,0:33:93.17:0,93,1081	0/0:7,0:7:20.99:0,21,211
chr10	100276436	.	TGAGAGAGA	T	365.60	PASS	AB=0.600;AC=9;AF=0.346;AN=26;BaseQRankSum=1.704;DP=132;FS=2.035;HRun=0;HaplotypeScore=30.7791;InbreedingCoeff=0.4777;MQ=33.42;MQ0=16;MQRankSum=-2.973;QD=8.92;ReadPosRankSum=1.704;VQSLOD=1.1940;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:4:3.01:0,3,65	0/0:2,0:2:6.02:0,6,96	./.	./.	./.	./.	./.	1/1:15,0:13:2.82:36,3,0	0/0:3,1:4:0:0,0,0	./.	./.	./.	0/0:2,0:1:0.47:0,0,1	./.	0/0:2,0:2:0.47:0,0,1	0/1:1,2:3:0:0,0,0	0/0:15,0:13:29.12:0,29,886	1/1:8,3:9:3.01:75,3,0	./.	0/0:8,0:10:3.01:0,3,65	./.	./.	./.	./.	0/0:5,0:5:6.02:0,6,131	1/1:2,2:4:6.02:131,6,0	./.	1/1:6,2:5:9.03:220,9,0
chr10	100276576	.	A	ACCCGGAT	1738.72	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.962;DP=471;FS=0.000;HRun=0;HaplotypeScore=107.5276;InbreedingCoeff=0.9827;MQ=97.13;MQ0=0;MQRankSum=-6.385;QD=62.10;ReadPosRankSum=1.453;VQSLOD=3.3534;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,15:27:45.15:1834,45,0	0/0:6,0:6:18.06:0,18,450	0/0:25,0:25:65.68:0,66,1513	0/0:23,0:23:60.18:0,60,1343	0/0:11,0:11:33.10:0,33,804	0/0:21,0:21:57.20:0,57,1444	0/0:10,0:10:30.10:0,30,766	0/0:27,0:27:78.25:0,78,1943	0/0:15,0:15:42.14:0,42,1076	0/0:7,0:7:18.06:0,18,484	0/0:15,0:15:45.14:0,45,1157	0/0:16,0:16:42.14:0,42,1097	0/0:17,0:17:51.18:0,51,1318	0/0:17,0:17:51.17:0,51,1330	0/0:20,0:20:57.20:0,57,1470	0/0:19,0:19:51.17:0,51,1375	0/0:23,0:23:69.20:0,69,1612	0/0:14,0:14:42.14:0,42,1130	0/0:17,0:17:51.18:0,51,1333	0/0:15,0:15:45.15:0,45,1205	0/0:23,0:23:69.24:0,69,1774	0/0:10,0:10:30.10:0,30,801	0/0:16,0:16:45.15:0,45,1178	0/0:15,0:15:42.12:0,42,1036	0/0:14,0:14:42.14:0,42,1096	0/0:19,0:19:54.18:0,54,1403	0/0:15,0:15:45.15:0,45,1183	0/0:13,0:13:39.13:0,39,1051
chr10	100278821	.	TC	T	181.46	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.333;DP=234;FS=1.288;HRun=7;HaplotypeScore=29.5820;InbreedingCoeff=0.6176;MQ=64.64;MQ0=1;MQRankSum=-0.345;QD=13.96;ReadPosRankSum=1.832;VQSLOD=1.8704;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,10:13:26.81:275,27,0	0/0:3,0:3:9.03:0,9,113	0/0:6,1:4:11.80:0,12,101	0/0:3,0:2:3.01:0,3,38	0/0:9,0:9:24.03:0,24,251	0/0:7,0:7:15.02:0,15,161	0/0:7,0:7:18.02:0,18,209	0/0:14,0:14:36.11:0,36,443	0/0:4,0:3:8.99:0,9,95	0/0:5,0:5:12.03:0,12,142	0/0:12,0:12:33.10:0,33,402	0/0:8,0:8:12.01:0,12,126	0/0:8,0:8:21.02:0,21,204	0/0:9,0:9:24:0,24,249	0/0:10,0:10:30.07:0,30,343	0/0:10,0:10:15.04:0,15,177	0/0:11,0:11:20.28:0,20,233	0/0:5,0:5:12.04:0,12,151	0/0:10,0:9:21.02:0,21,235	0/0:16,0:16:36.10:0,36,440	0/0:4,0:4:9.02:0,9,100	0/0:13,0:13:24.07:0,24,290	0/0:7,0:7:15.03:0,15,165	0/0:7,0:7:18.03:0,18,200	0/0:10,0:10:24.06:0,24,288	0/0:10,0:10:18.06:0,18,224	0/0:7,0:7:21.01:0,21,233	0/0:5,0:5:15.04:0,15,176
chr10	100279649	.	GCA	G	4314.41	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=14.694;DP=749;FS=0.384;HRun=0;HaplotypeScore=143.9919;InbreedingCoeff=0.9156;MQ=50.29;MQ0=16;MQRankSum=-4.267;QD=14.78;ReadPosRankSum=0.113;VQSLOD=4.2235;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,26:37:30.78:596,31,0	0/0:19,0:19:48.16:0,48,779	0/1:23,0:7:5.60:6,0,137	0/0:26,0:9:12.04:0,12,198	0/0:25,1:26:22.66:0,23,878	1/1:4,9:13:5.62:75,6,0	1/1:20,23:42:37.10:498,37,0	1/1:9,18:26:51.14:618,51,0	1/1:6,14:19:30.04:357,30,0	0/0:35,0:35:89.99:0,90,1296	0/0:13,0:13:27.09:0,27,436	0/0:29,0:29:69.12:0,69,1018	0/0:23,0:23:63.21:0,63,1023	0/0:33,1:33:49.68:0,50,1236	0/0:30,1:31:43.87:0,44,1242	1/1:16,13:29:42.21:448,42,0	0/0:36,1:36:55.24:0,55,1315	1/1:15,15:29:48.13:577,48,0	0/0:20,0:18:42.13:0,42,669	0/0:24,0:24:68.43:0,68,1063	1/1:19,26:42:41.94:525,42,0	0/0:20,0:20:48.16:0,48,793	0/0:26,0:26:57.19:0,57,916	0/0:33,1:32:84.29:0,84,1381	0/0:41,0:41:87.28:0,87,1405	1/1:6,12:17:35.93:452,36,0	0/0:18,0:18:48.16:0,48,792	1/1:2,4:6:14.88:164,15,0
chr10	100279651	.	A	ATG	1652.24	PASS	AB=0.895;AC=11;AF=0.196;AN=56;BaseQRankSum=9.847;DP=756;FS=7.851;HRun=0;HaplotypeScore=157.4633;InbreedingCoeff=0.1125;MQ=50.38;MQ0=16;MQRankSum=-5.345;QD=6.28;ReadPosRankSum=-2.910;VQSLOD=1.9667;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,1:37:99:427,0,99	0/0:19,0:19:54.16:0,54,843	0/0:24,0:8:20.43:0,20,277	0/0:25,0:9:21.05:0,21,295	0/0:26,0:26:65.81:0,66,1024	0/0:12,0:12:4.63:0,5,16	0/1:42,4:45:68.66:193,0,69	1/1:25,0:24:6.14:84,6,0	0/1:19,3:21:18.35:57,0,18	0/0:33,0:33:95.77:0,96,1453	0/0:13,0:13:36.12:0,36,563	0/0:32,0:32:84.29:0,84,1335	0/0:22,0:22:66.23:0,66,1067	0/0:34,0:33:89.86:0,90,1434	0/0:31,0:31:52.88:0,53,1339	0/1:20,9:30:16.39:341,0,16	0/0:35,0:34:95.91:0,96,1506	0/1:25,4:28:17.27:356,0,17	0/0:23,0:21:57.12:0,57,826	0/0:25,0:25:69.24:0,69,1110	0/1:47,1:45:22.87:73,0,23	0/0:20,0:20:54.16:0,54,850	0/0:25,0:25:69.23:0,69,1074	0/0:35,0:33:87.30:0,87,1412	0/0:41,0:41:99:0,111,1743	0/1:18,2:19:14.65:200,0,15	0/0:18,0:18:54.18:0,54,871	1/1:4,0:5:2.14:69,2,0
chr10	100280416	.	GA	G	2888.72	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=8.974;DP=536;FS=12.678;HRun=9;HaplotypeScore=62.8687;InbreedingCoeff=0.9670;MQ=81.03;MQ0=0;MQRankSum=-2.116;QD=20.63;ReadPosRankSum=1.493;VQSLOD=3.4578;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.17:0,57,658	0/0:11,0:11:30.08:0,30,337	0/0:28,0:20:23.88:0,24,240	0/0:20,1:16:6.95:0,7,117	0/0:39,0:40:99:0,108,1226	1/1:4,13:17:36.01:329,36,0	1/1:0,15:15:45.02:412,45,0	1/1:6,21:27:62.98:563,63,0	1/1:1,14:15:36.02:329,36,0	0/0:20,0:20:57.17:0,57,658	0/0:19,1:20:26.69:0,27,561	0/0:14,0:14:39.12:0,39,450	0/0:10,0:10:30.09:0,30,346	0/0:9,0:9:18.04:0,18,198	0/0:22,0:22:60.17:0,60,683	1/1:0,13:13:30.02:275,30,0	0/0:11,0:11:17.80:0,18,300	1/1:1,11:12:33.02:302,33,0	0/0:25,0:26:72.03:0,72,802	0/0:29,0:30:81.09:0,81,905	1/1:1,8:9:18.01:165,18,0	0/0:15,0:16:44.97:0,45,499	0/0:35,0:35:96.26:0,96,1084	0/0:7,0:7:18.05:0,18,208	0/0:20,0:21:57:0,57,637	1/1:3,21:24:7.23:506,7,0	0/0:34,0:34:90.26:0,90,1028	1/1:0,8:8:24.01:220,24,0
chr10	100280843	.	GAT	G	95.69	PASS	AB=0.898;AC=8;AF=0.174;AN=46;BaseQRankSum=1.597;DP=220;FS=9.720;HRun=0;HaplotypeScore=55.1351;InbreedingCoeff=-0.0001;MQ=82.18;MQ0=2;MQRankSum=-1.637;QD=1.74;ReadPosRankSum=-3.019;VQSLOD=-0.4472;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:3,0:3:0:0,0,0	0/0:4,0:4:9.03:0,9,141	0/0:9,0:9:0:0,0,0	0/0:10,0:7:8.97:0,9,79	0/0:5,0:5:3.01:0,3,47	0/1:11,0:11:3.70:4,0,4	./.	0/0:39,0:36:54.73:0,55,341	0/0:10,0:10:4.29:0,4,61	0/0:4,0:4:3.01:0,3,48	0/0:1,0:1:3.01:0,3,48	0/0:4,0:4:6.02:0,6,94	0/0:6,0:6:9.03:0,9,143	0/0:4,0:4:3.01:0,3,48	0/1:7,1:8:26.53:27,0,86	1/1:4,0:4:1.55:4,2,0	0/1:11,4:15:99:109,0,300	0/0:10,0:10:6.63:0,7,67	0/1:9,1:10:26.49:26,0,86	./.	0/0:6,0:6:2.99:0,3,23	./.	./.	./.	0/1:3,1:4:29.54:30,0,42	0/0:9,0:9:11.09:0,11,67	0/0:8,1:8:12.04:0,12,190	0/0:21,0:21:7.54:0,8,92
chr10	100280860	.	A	ACATATG	1541.05	PASS	AB=0.960;AC=10;AF=0.200;AN=50;BaseQRankSum=-0.130;DP=186;FS=4.784;HRun=0;HaplotypeScore=66.9502;InbreedingCoeff=0.2235;MQ=68.07;MQ0=3;MQRankSum=-3.692;QD=14.96;ReadPosRankSum=0.054;VQSLOD=1.6575;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:5.98:0,6,46	0/0:4,0:4:12.04:0,12,253	0/0:2,0:1:0.47:0,0,1	0/0:12,0:7:4.05:0,4,97	0/0:4,0:4:12.04:0,12,223	1/1:10,0:10:3.01:80,3,0	0/0:1,0:1:3.01:0,3,33	0/1:43,0:40:99:712,0,505	1/1:8,2:10:5.69:257,6,0	0/0:2,0:2:6.02:0,6,113	0/0:3,0:3:6.01:0,6,102	0/0:4,0:4:9.02:0,9,178	0/0:4,0:4:9.03:0,9,230	0/0:3,0:3:0.97:0,1,93	0/0:4,0:4:12.03:0,12,229	./.	0/0:13,0:13:39.12:0,39,807	0/1:10,0:10:26.97:27,0,70	0/0:4,0:4:12.04:0,12,246	0/0:2,0:2:5.99:0,6,50	1/1:2,0:2:3:25,3,0	./.	0/0:2,0:2:5.99:0,6,50	./.	0/0:7,0:7:18.04:0,18,281	0/1:7,0:7:30.64:108,0,31	0/0:7,0:6:18.04:0,18,380	0/1:17,4:21:3.54:462,0,4
chr10	100280865	.	TA	T	1145.67	PASS	AC=16;AF=0.320;AN=50;BaseQRankSum=8.696;DP=188;FS=2.262;HRun=2;HaplotypeScore=52.4775;InbreedingCoeff=0.7488;MQ=66.01;MQ0=3;MQRankSum=-9.129;QD=11.81;ReadPosRankSum=-0.922;VQSLOD=1.7467;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:4:12.04:0,12,175	0/0:2,0:1:0:0,0,0	0/0:11,0:6:14.38:0,14,127	0/0:7,1:8:24:0,24,287	1/1:8,1:10:9.22:41,9,0	1/1:0,1:1:3.01:38,3,0	1/1:10,19:36:75.97:866,76,0	1/1:5,5:10:10.07:86,10,0	0/0:3,0:3:9.03:0,9,125	0/0:4,0:4:9.03:0,9,125	0/0:5,0:5:15.03:0,15,188	0/0:4,0:4:12.04:0,12,175	0/0:2,0:2:6.02:0,6,85	0/0:5,0:5:14.06:0,14,161	1/1:1,0:3:1.55:4,2,0	0/0:14,0:14:38.25:0,38,459	1/1:5,0:8:3.27:40,3,0	0/0:5,0:5:14.07:0,14,164	0/0:2,0:2:6.02:0,6,80	./.	./.	0/0:4,0:4:12.01:0,12,129	0/0:2,0:2:6:0,6,63	0/0:8,0:8:23.09:0,23,275	1/1:2,1:5:10.54:89,11,0	0/0:7,0:6:18.06:0,18,259	1/1:11,1:21:20.95:148,21,0
chr10	100280866	.	A	ACAT	2835.06	PASS	AC=14;AF=0.304;AN=46;BaseQRankSum=7.431;DP=189;FS=1.380;HRun=0;HaplotypeScore=54.0440;InbreedingCoeff=0.7973;MQ=65.58;MQ0=3;MQRankSum=-9.567;QD=30.48;ReadPosRankSum=0.862;VQSLOD=3.5112;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:4:12.04:0,12,223	./.	0/0:11,0:6:14.20:0,14,131	0/0:8,0:8:24.03:0,24,355	1/1:2,4:10:3:27,3,0	1/1:1,0:1:3.01:55,3,0	1/1:31,9:37:98.89:1675,99,0	1/1:6,2:10:12.04:253,12,0	0/0:3,0:3:9.03:0,9,166	0/0:5,0:5:9.03:0,9,156	0/0:5,0:5:15.03:0,15,232	0/0:4,0:4:12.04:0,12,223	0/0:2,0:2:6.02:0,6,111	0/0:5,0:5:15.04:0,15,226	./.	0/0:15,0:15:42.14:0,42,678	1/1:4,4:9:12.04:274,12,0	0/0:5,0:5:15.04:0,15,229	0/0:2,0:2:6.02:0,6,111	./.	./.	0/0:4,0:4:12.01:0,12,160	0/0:2,0:2:6:0,6,78	0/0:8,0:8:24.07:0,24,391	1/1:4,2:6:12.04:231,12,0	0/0:7,0:6:18.06:0,18,334	1/1:6,5:17:24.07:486,24,0
chr10	100281156	.	C	CGT	4349.92	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=8.921;DP=514;FS=7.323;HRun=0;HaplotypeScore=67.8159;InbreedingCoeff=0.9226;MQ=74.04;MQ0=1;MQRankSum=-2.418;QD=22.31;ReadPosRankSum=-0.129;VQSLOD=4.7645;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:22:54.18:864,54,0	0/0:7,0:7:15.05:0,15,183	0/0:30,0:27:38.94:0,39,444	0/0:25,0:23:48.09:0,48,552	0/0:12,0:12:27.08:0,27,330	1/1:22,0:22:45.13:532,45,0	1/1:14,0:14:21.06:230,21,0	1/1:34,0:34:60.13:613,60,0	1/1:15,0:15:36.10:396,36,0	0/0:18,0:19:41.96:0,42,489	0/0:12,0:13:35.94:0,36,417	0/0:19,0:19:48.15:0,48,584	0/0:27,0:27:66.21:0,66,805	0/0:23,0:24:60.02:0,60,710	0/0:29,0:29:66.21:0,66,805	1/1:22,0:22:39.11:427,39,0	0/0:7,0:7:12.04:0,12,146	1/1:18,0:17:33.10:386,33,0	0/0:11,0:11:15.05:0,15,182	0/0:10,0:10:27.08:0,27,330	1/1:23,0:23:33.09:373,33,0	0/0:6,0:6:18.06:0,18,220	0/0:11,0:11:27.08:0,27,330	0/0:18,0:18:42.09:0,42,495	0/0:10,0:10:24.08:0,24,293	0/1:14,0:13:6.62:252,0,7	0/0:40,0:40:99:0,102,1223	1/1:11,0:11:24.07:278,24,0
chr10	100281163	.	G	GTA	6828.17	PASS	AB=0.771;AC=18;AF=0.321;AN=56;BaseQRankSum=-11.645;DP=498;FS=2.182;HRun=0;HaplotypeScore=55.2136;InbreedingCoeff=0.8643;MQ=76.04;MQ0=1;MQRankSum=-2.961;QD=36.32;ReadPosRankSum=1.298;VQSLOD=6.8181;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:2.95:380,0,3	0/0:6,0:6:18.04:0,18,253	0/0:31,0:28:72.18:0,72,946	0/0:29,0:27:69.18:0,69,944	0/0:10,0:10:30.08:0,30,435	1/1:2,21:23:45.15:865,45,0	1/1:1,13:14:21.07:405,21,0	1/1:3,32:36:99:1497,99,0	1/1:0,15:16:36.12:694,36,0	0/0:14,0:14:42.10:0,42,616	0/0:12,0:12:36.08:0,36,523	0/0:19,0:19:57.14:0,57,805	0/0:28,0:28:84.17:0,84,1144	0/0:22,0:22:63.15:0,63,906	0/0:27,0:27:78.19:0,78,1102	1/1:0,19:19:39.13:752,39,0	0/0:6,0:6:18.03:0,18,232	1/1:0,14:13:33.11:634,33,0	0/0:10,0:10:27.01:0,27,303	0/0:13,0:13:36.08:0,36,487	1/1:1,19:20:33.11:635,33,0	0/0:6,0:6:18.06:0,18,275	0/0:10,0:10:30.08:0,30,436	0/0:17,0:17:51.12:0,51,708	0/0:12,0:12:33.01:0,33,433	0/1:2,11:12:12.80:504,0,13	0/0:38,0:37:99:0,111,1596	1/1:0,11:11:24.08:461,24,0
chr10	100281474	.	A	AT	3669.52	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-13.159;DP=590;FS=5.442;HRun=9;HaplotypeScore=53.0997;InbreedingCoeff=0.9424;MQ=71.01;MQ0=0;MQRankSum=0.946;QD=23.37;ReadPosRankSum=-1.258;VQSLOD=4.0354;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:56.99:0,57,495	0/0:15,0:15:38.98:0,39,336	0/0:8,0:7:11.98:0,12,101	0/0:9,0:9:17.13:0,17,124	0/0:25,0:25:68.97:0,69,594	1/1:5,19:24:8.06:545,8,0	1/1:4,18:22:51.14:564,51,0	1/1:4,23:28:68.98:723,69,0	1/1:4,11:15:30.08:332,30,0	0/0:23,0:23:65.98:0,66,572	0/0:30,0:30:77.94:0,78,671	0/0:23,0:23:56.94:0,57,487	0/0:22,0:22:62.97:0,63,544	0/0:21,0:21:59.99:0,60,521	0/0:29,0:29:80.98:0,81,703	1/1:3,14:17:17.81:377,18,0	0/0:16,0:16:40.24:0,40,342	1/1:4,8:12:24.06:264,24,0	0/0:22,0:22:53.97:0,54,469	0/0:40,0:40:95.88:0,96,822	1/1:1,5:7:17.87:174,18,0	0/0:29,0:29:83.98:0,84,729	0/0:29,1:30:50.80:0,51,670	0/0:16,0:16:41.98:0,42,362	0/0:27,0:27:77.98:0,78,677	1/1:4,14:18:42.10:451,42,0	0/0:28,0:28:68.90:0,69,599	1/1:5,9:14:1.02:239,1,0
chr10	100282277	.	AAAAC	A	1071.51	PASS	AB=0.951;AC=6;AF=0.107;AN=56;BaseQRankSum=8.041;DP=774;FS=2.455;HRun=0;HaplotypeScore=123.9932;InbreedingCoeff=0.6162;MQ=68.05;MQ0=3;MQRankSum=-0.245;QD=11.05;ReadPosRankSum=-0.740;VQSLOD=3.3129;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,19:33:39.13:615,39,0	0/0:12,0:12:24.08:0,24,568	0/0:26,0:20:3.01:0,3,54	0/0:27,0:19:9.03:0,9,182	0/0:21,0:21:27.09:0,27,637	0/1:19,1:20:2.15:2,0,877	0/0:23,0:23:45.15:0,45,1032	0/0:35,0:35:33.03:0,33,617	0/0:13,0:27:21.07:0,21,363	0/0:42,0:42:93.30:0,93,2003	0/0:25,0:26:29.23:0,29,1218	0/0:29,0:29:40.15:0,40,932	0/0:35,0:35:75.24:0,75,1701	0/0:23,0:23:33.09:0,33,718	0/0:42,0:42:84.27:0,84,1896	0/0:36,0:36:72.23:0,72,1618	1/1:10,15:24:36.11:567,36,0	0/0:26,0:26:41.93:0,42,1026	0/0:28,0:27:36.12:0,36,848	0/0:42,0:42:99:0,99,2226	0/0:19,0:19:18.06:0,18,427	0/0:31,0:31:42.14:0,42,974	0/0:18,0:18:36.09:0,36,679	0/0:33,0:33:39.09:0,39,802	0/1:18,1:19:17.18:17,0,584	0/0:27,0:27:54.19:0,54,1274	0/0:37,0:37:75.26:0,75,1721	0/0:12,0:12:33.11:0,33,775
chr10	100282514	.	GA	G	3009.56	PASS	AB=0.804;AC=20;AF=0.357;AN=56;BaseQRankSum=10.077;DP=569;FS=7.120;HRun=11;HaplotypeScore=76.4898;InbreedingCoeff=0.7062;MQ=83.73;MQ0=0;MQRankSum=0.893;QD=13.38;ReadPosRankSum=-0.603;VQSLOD=3.3837;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:33.04:0,33,340	0/1:11,2:13:19.22:19,0,220	0/1:22,3:25:81.90:82,0,87	0/1:20,1:19:33.01:33,0,101	0/0:32,1:33:57.42:0,57,795	0/1:4,17:22:4.64:322,0,5	1/1:4,7:11:17.97:148,18,0	1/1:7,25:32:77.67:619,78,0	1/1:3,20:23:53.91:443,54,0	0/0:22,1:23:35.50:0,35,577	0/0:18,0:18:39.08:0,39,408	0/0:15,0:15:36.09:0,36,384	0/0:19,1:21:26.32:0,26,462	0/0:15,0:15:39.09:0,39,409	0/0:22,1:23:38.50:0,39,608	1/1:2,22:24:65.92:542,66,0	0/0:22,0:23:59.98:0,60,622	1/1:2,16:18:41.92:345,42,0	0/0:22,1:23:47.99:0,48,478	0/0:32,1:33:61.76:0,62,836	1/1:4,9:13:23.95:197,24,0	0/0:15,0:16:44.93:0,45,452	0/0:28,0:28:78.10:0,78,798	0/0:11,0:11:21.05:0,21,224	0/0:11,0:14:41.60:0,42,389	1/1:1,14:15:41.95:345,42,0	0/0:32,0:35:86.90:0,87,878	1/1:1,5:6:14.98:123,15,0
chr10	100283165	.	AAT	A	212.89	PASS	AB=0.787;AC=2;AF=0.036;AN=56;BaseQRankSum=5.144;DP=643;FS=2.968;HRun=0;HaplotypeScore=75.4993;InbreedingCoeff=-0.0371;MQ=78.71;MQ0=0;MQRankSum=5.116;QD=7.34;ReadPosRankSum=-2.676;VQSLOD=2.8557;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.23:0,66,1319	0/0:21,0:21:63.22:0,63,1259	0/1:11,5:16:99:203,0,451	0/1:10,3:13:98.50:99,0,348	0/0:35,0:35:99:0,105,2123	0/0:30,0:30:90.28:0,90,1732	0/0:12,0:12:36.11:0,36,652	0/0:31,0:31:93.30:0,93,1734	0/0:25,0:25:75.26:0,75,1492	0/0:34,0:34:99:0,102,2003	0/0:20,0:20:60.21:0,60,1179	0/0:24,0:24:72.25:0,72,1462	0/0:31,0:31:93.32:0,93,1842	0/0:26,0:26:78.26:0,78,1504	0/0:25,0:25:75.26:0,75,1500	0/0:18,0:18:54.19:0,54,1096	0/0:18,0:18:54.19:0,54,1089	0/0:16,0:16:45.15:0,45,885	0/0:16,0:16:48.16:0,48,943	0/0:42,0:42:99:0,126,2467	0/0:16,0:16:48.16:0,48,958	0/0:25,0:25:75.26:0,75,1501	0/0:26,0:26:78.24:0,78,1473	0/0:14,0:14:42.14:0,42,853	0/0:24,0:24:72.25:0,72,1435	0/0:17,0:17:51.17:0,51,1002	0/0:37,0:37:99:0,111,2174	0/0:9,0:9:27.08:0,27,512
chr10	100287971	.	TCCTC	T	1075.49	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=0.214;DP=284;FS=41.755;HRun=0;HaplotypeScore=48.9663;InbreedingCoeff=0.8079;MQ=74.33;MQ0=7;MQRankSum=1.313;QD=26.89;ReadPosRankSum=-3.918;VQSLOD=1.0774;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:24.06:0,24,415	0/0:8,0:8:21.07:0,21,421	0/0:25,0:15:40.02:0,40,649	0/0:22,0:10:26.36:0,26,349	0/0:18,0:18:54.07:0,54,1144	1/1:3,0:3:9.03:151,9,0	1/1:10,0:9:12.50:203,13,0	1/1:4,6:8:18.02:228,18,0	0/1:4,0:4:14.83:92,0,15	0/0:8,0:8:21.06:0,21,397	0/0:9,0:9:24.55:0,25,552	0/0:10,0:10:30.10:0,30,627	0/0:15,0:15:42.14:0,42,956	0/0:16,0:15:42.12:0,42,954	0/0:20,0:20:60.19:0,60,1197	1/1:7,0:7:21.07:358,21,0	0/0:5,0:5:15.05:0,15,339	1/1:2,0:2:6.02:99,6,0	0/0:9,0:8:24.07:0,24,465	0/0:11,0:11:30.10:0,30,630	1/1:2,0:2:3.01:51,3,0	0/0:20,0:20:57.17:0,57,1172	0/0:6,0:6:15.05:0,15,236	0/0:9,0:9:24.08:0,24,623	0/0:6,0:6:15.52:0,16,374	1/1:2,0:2:5.98:72,6,0	0/0:16,0:15:45.15:0,45,1001	./.
chr10	100288513	.	CCACCACCACCACCAACAACAA	C	307.94	PASS	AB=1.000;AC=7;AF=0.140;AN=50;BaseQRankSum=4.129;DP=293;FS=1.236;HRun=0;HaplotypeScore=124.7572;InbreedingCoeff=0.0166;MQ=48.71;MQ0=29;MQRankSum=-3.389;QD=3.28;ReadPosRankSum=-1.238;VQSLOD=2.4336;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,40:41:2.64:130,3,0	0/0:4,0:4:2.13:0,2,5	./.	./.	0/0:4,0:4:12.04:0,12,528	0/1:9,0:7:35.69:36,0,268	0/1:19,0:14:99:111,0,565	0/0:8,0:4:2.99:0,3,50	0/0:10,0:10:7.42:0,7,774	0/0:9,0:8:24.08:0,24,1271	0/0:2,0:2:6.02:0,6,427	0/0:12,0:12:27.09:0,27,1058	0/0:11,0:11:24.97:0,25,1242	0/0:11,0:11:30.10:0,30,1320	0/0:11,0:11:33.09:0,33,1109	0/1:7,0:6:59:59,0,425	0/0:20,0:20:54.10:0,54,2838	0/1:7,0:6:55.05:55,0,141	0/1:10,0:9:36.81:37,0,645	0/0:1,0:1:3.01:0,3,96	0/0:16,0:12:15.92:0,16,208	0/0:3,0:1:2.04:0,2,6	0/0:4,0:4:12.04:0,12,560	0/0:31,0:27:75.26:0,75,3621	0/0:11,0:11:18.06:0,18,878	0/0:7,0:6:6.02:0,6,295	0/0:4,0:3:9.01:0,9,420	./.
chr10	100288525	.	CCAACAACAACAA	C	1381.02	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=3.298;DP=307;FS=2.578;HRun=0;HaplotypeScore=90.8501;InbreedingCoeff=0.4687;MQ=51.00;MQ0=24;MQRankSum=-3.168;QD=11.80;ReadPosRankSum=-1.306;VQSLOD=1.8895;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:43,0:42:3.90:55,4,0	0/0:3,0:3:3.01:0,3,96	0/0:4,0:2:6.02:0,6,161	0/0:7,0:2:6:0,6,79	0/0:8,0:8:21.07:0,21,720	0/1:7,0:6:7.94:157,0,8	0/1:17,0:13:81.01:432,0,81	1/1:3,6:7:17.95:177,18,0	0/1:11,0:11:20.44:191,0,20	0/0:11,0:10:18.06:0,18,714	0/0:4,0:4:9.03:0,9,367	0/0:12,0:12:23.42:0,23,445	0/0:9,0:9:19.29:0,19,682	0/0:16,0:16:33.11:0,33,1190	0/0:11,0:11:30.10:0,30,1063	1/1:9,0:8:15.05:236,15,0	0/0:20,0:20:48.16:0,48,2056	1/1:8,0:7:12.53:289,13,0	0/0:14,0:13:20.10:0,20,425	0/0:3,0:3:6.02:0,6,114	0/1:13,0:8:0.23:4,0,0	0/0:6,0:5:15.02:0,15,231	0/0:5,0:5:15.05:0,15,598	0/0:30,0:27:75.26:0,75,3140	0/0:14,0:14:30.10:0,30,1171	0/0:3,3:6:2.98:0,3,21	0/0:6,0:5:12.04:0,12,304	0/0:1,0:1:3.01:0,3,63
chr10	100289316	.	A	AG	1820.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.002;DP=698;FS=2.018;HRun=0;HaplotypeScore=73.5050;InbreedingCoeff=0.9916;MQ=85.76;MQ0=0;MQRankSum=-4.741;QD=37.15;ReadPosRankSum=1.719;VQSLOD=3.9430;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,49:49:99:1915,120,0	0/0:11,0:11:33.11:0,33,461	0/0:25,0:25:71.82:0,72,971	0/0:25,0:25:69.23:0,69,966	0/0:30,0:30:87.29:0,87,1216	0/0:20,0:20:57.19:0,57,797	0/0:21,0:21:60.20:0,60,839	0/0:33,0:33:96.30:0,96,1311	0/0:16,0:16:48.16:0,48,670	0/0:20,0:20:60.20:0,60,839	0/0:27,0:27:75.23:0,75,1030	0/0:23,0:23:69.23:0,69,965	0/0:29,0:29:84.28:0,84,1171	0/0:24,0:24:72.21:0,72,971	0/0:30,0:30:87.25:0,87,1162	0/0:26,0:26:75.24:0,75,1031	0/0:40,0:40:99:0,120,1656	0/0:14,0:14:42.14:0,42,584	0/0:13,0:13:39.12:0,39,529	0/0:13,0:13:39.13:0,39,545	0/0:44,0:44:99:0,126,1727	0/0:22,0:22:66.20:0,66,905	0/0:15,0:15:45.15:0,45,629	0/0:24,0:24:72.24:0,72,1006	0/0:18,0:18:54.13:0,54,716	0/0:47,0:47:99:0,138,1863	0/0:33,0:33:96.30:0,96,1320	0/0:6,0:6:18.06:0,18,251
chr10	100289377	.	C	CTATCGG	2817.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.648;DP=695;FS=12.187;HRun=0;HaplotypeScore=158.9908;InbreedingCoeff=0.9987;MQ=88.34;MQ0=0;MQRankSum=-8.872;QD=70.44;ReadPosRankSum=-1.750;VQSLOD=3.1786;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,29:40:90.17:2912,90,0	0/0:10,0:10:30.10:0,30,739	0/0:25,0:25:66.22:0,66,1509	0/0:27,0:27:71.91:0,72,1629	0/0:24,0:24:66.23:0,66,1599	0/0:21,0:21:63.22:0,63,1550	0/0:25,0:25:75.26:0,75,1839	0/0:25,0:25:69.21:0,69,1501	0/0:13,0:13:30.10:0,30,739	0/0:26,0:25:69.22:0,69,1635	0/0:18,0:18:51.18:0,51,1253	0/0:32,0:32:90.31:0,90,2157	0/0:24,0:24:69.24:0,69,1651	0/0:25,0:25:69.22:0,69,1650	0/0:28,0:28:84.27:0,84,2017	0/0:28,0:28:81.26:0,81,1898	0/0:36,0:36:99:0,105,2569	0/0:17,0:17:48.14:0,48,1131	0/0:17,0:17:48.14:0,48,1083	0/0:25,0:25:69.21:0,69,1569	0/0:49,0:49:99:0,144,3455	0/0:24,0:24:66.23:0,66,1541	0/0:26,0:26:78.25:0,78,1857	0/0:18,0:18:54.19:0,54,1322	0/0:16,0:16:48.16:0,48,1160	0/0:40,0:40:99:0,117,2856	0/0:25,0:25:75.24:0,75,1776	0/0:11,0:11:33.11:0,33,801
chr10	100289512	.	A	AT	2024.14	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.089;DP=787;FS=3.377;HRun=2;HaplotypeScore=81.1699;InbreedingCoeff=0.9960;MQ=83.90;MQ0=0;MQRankSum=-4.900;QD=36.15;ReadPosRankSum=0.743;VQSLOD=4.2236;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,56:56:99:2119,147,0	0/0:16,0:16:45.13:0,45,569	0/0:22,0:22:59.10:0,59,688	0/0:27,0:27:68.55:0,69,769	0/0:40,0:40:99:0,114,1447	0/0:27,0:27:81.23:0,81,1022	0/0:23,0:23:66.21:0,66,857	0/0:37,0:37:99:0,108,1390	0/0:25,0:25:63.19:0,63,803	0/0:40,0:40:99:0,111,1388	0/0:21,0:21:63.19:0,63,803	0/0:28,0:28:84.27:0,84,1085	0/0:25,0:25:72.22:0,72,916	0/0:34,0:34:96.30:0,96,1232	0/0:29,0:28:84.27:0,84,1090	0/0:37,0:37:99:0,108,1401	0/0:33,0:33:96.29:0,96,1228	0/0:19,0:19:57.19:0,57,739	0/0:18,0:18:51.14:0,51,634	0/0:34,0:34:99:0,99,1285	0/0:35,0:35:99:0,102,1308	0/0:25,0:25:75.23:0,75,959	0/0:19,0:19:54.16:0,54,686	0/0:29,0:29:84.27:0,84,1085	0/0:17,0:17:48.14:0,48,609	0/0:44,0:44:99:0,129,1652	0/0:20,0:20:60.18:0,60,761	0/0:7,0:7:21.07:0,21,273
chr10	100289909	.	G	GAC	9863.04	PASS	AB=0.603;AC=16;AF=0.286;AN=56;BaseQRankSum=-13.806;DP=944;FS=17.075;HRun=0;HaplotypeScore=113.5172;InbreedingCoeff=0.6463;MQ=69.02;MQ0=2;MQRankSum=-0.829;QD=28.59;ReadPosRankSum=1.030;VQSLOD=5.2041;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:36:65.99:585,66,0	0/0:8,0:8:21.05:0,21,250	0/0:30,0:25:49.74:0,50,539	0/0:44,0:36:13.50:0,14,563	0/0:30,0:30:69.17:0,69,823	1/1:6,26:32:32:1053,32,0	0/1:11,20:31:55.41:722,0,55	0/1:11,25:39:22.95:1022,0,23	1/1:8,22:30:16.65:803,17,0	0/0:30,0:30:60.18:0,60,731	0/0:21,0:21:54.16:0,54,663	0/0:53,0:54:99:0,126,1511	0/0:53,0:53:99:0,150,1831	0/0:51,0:51:99:0,132,1571	0/0:59,0:61:99:0,156,1863	1/1:4,41:45:73.85:1746,74,0	0/0:32,0:32:80.94:0,81,951	1/1:3,26:30:48.16:793,48,0	0/0:31,0:31:57.14:0,57,664	0/0:20,0:20:45.12:0,45,536	0/1:20,33:53:17.21:1734,0,17	0/0:31,0:31:83.62:0,84,1008	0/0:22,0:22:51.15:0,51,625	0/0:42,0:42:99:0,108,1246	0/0:8,0:9:26.90:0,27,297	1/1:4,24:28:34.67:1040,35,0	0/0:29,0:30:78.05:0,78,924	0/1:7,13:20:44.92:366,0,45
chr10	100290035	.	ACACT	A	9763.20	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=9.494;DP=821;FS=3.862;HRun=0;HaplotypeScore=140.3031;InbreedingCoeff=0.9685;MQ=55.60;MQ0=17;MQRankSum=-3.931;QD=30.13;ReadPosRankSum=1.896;VQSLOD=4.4613;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:99:0,132,2474	0/0:9,0:9:27.09:0,27,671	0/0:21,0:1:2.98:0,3,21	0/0:28,0:8:16.91:0,17,163	0/0:17,0:17:45.11:0,45,1035	1/1:1,20:21:36.04:612,36,0	1/1:2,31:33:48.56:842,49,0	1/1:25,13:36:60.11:1113,60,0	1/1:1,30:31:51.17:962,51,0	0/0:23,0:23:69.20:0,69,1530	0/0:11,0:11:33.09:0,33,738	0/0:38,0:38:99:0,105,2496	0/0:43,0:43:99:0,120,2844	0/0:35,0:35:82.75:0,83,1732	0/0:46,0:46:99:0,123,2830	1/1:1,35:36:69.23:1283,69,0	0/0:39,0:39:99:0,111,2555	1/1:8,13:21:30.15:802,30,0	0/0:25,0:22:66.20:0,66,1605	0/0:14,0:14:39.11:0,39,925	1/1:8,103:111:99:2671,141,0	0/0:17,0:17:48.16:0,48,1253	0/0:18,0:18:54.17:0,54,1318	0/0:36,0:36:99:0,102,2338	0/0:14,0:14:36.11:0,36,901	1/1:11,16:26:72.10:1235,72,0	0/0:17,0:17:46.23:0,46,1148	1/1:6,0:6:15.02:243,15,0
chr10	100293398	.	GA	G	8455.50	PASS	AC=18;AF=0.333;AN=54;BaseQRankSum=15.624;DP=627;FS=3.069;HRun=2;HaplotypeScore=76.4499;InbreedingCoeff=0.9962;MQ=87.84;MQ0=0;MQRankSum=-7.645;QD=34.65;ReadPosRankSum=3.306;VQSLOD=5.4596;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:34:93.30:1207,93,0	0/0:13,0:13:39.12:0,39,563	0/0:23,0:23:64.73:0,65,889	0/0:21,0:21:60.15:0,60,836	0/0:17,0:17:51.16:0,51,745	1/1:0,32:32:90.29:1168,90,0	1/1:0,29:29:66.21:857,66,0	1/1:0,31:31:87.20:1079,87,0	1/1:0,23:23:66.21:857,66,0	0/0:23,0:23:63.20:0,63,927	0/0:13,0:13:33.11:0,33,492	0/0:21,0:21:63.21:0,63,939	0/0:33,0:33:99:0,99,1479	0/0:21,0:21:60.20:0,60,897	0/0:25,0:25:75.25:0,75,1124	1/1:0,32:32:84.27:1091,84,0	0/0:25,0:25:75.25:0,75,1124	1/1:0,8:8:18.06:234,18,0	0/0:24,0:24:69.16:0,69,986	0/0:20,0:20:57.16:0,57,794	1/1:0,34:34:99:1285,99,0	0/0:22,0:22:60.15:0,60,899	0/0:18,0:18:45.14:0,45,656	0/0:26,0:26:75.25:0,75,1124	0/0:12,0:12:33.11:0,33,494	1/1:1,20:21:15.20:677,15,0	0/0:26,0:26:78.21:0,78,1120	./.
chr10	100294044	.	GTCATCA	G	2766.53	PASS	AB=0.900;AC=15;AF=0.313;AN=48;BaseQRankSum=7.758;DP=602;FS=2.764;HRun=0;HaplotypeScore=126.6526;InbreedingCoeff=0.8838;MQ=70.34;MQ0=7;MQRankSum=-11.132;QD=18.32;ReadPosRankSum=0.287;VQSLOD=3.4581;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:31:31.46:421,31,0	0/0:11,0:11:15.05:0,15,461	./.	./.	0/0:22,0:22:39.12:0,39,1120	1/1:18,15:33:39.13:780,39,0	1/1:11,10:21:15.05:260,15,0	./.	1/1:9,7:16:21.07:420,21,0	0/0:30,0:28:27.09:0,27,774	0/0:20,0:20:24.08:0,24,713	0/0:27,0:27:33.11:0,33,1008	0/0:19,0:19:51.16:0,51,1485	0/0:24,0:24:42.14:0,42,1282	0/0:27,0:27:45.12:0,45,1283	1/1:9,12:21:27.09:537,27,0	0/0:28,0:28:45.15:0,45,1372	0/1:8,1:9:15.84:54,0,16	0/0:16,0:22:21.07:0,21,549	0/0:9,0:20:33.11:0,33,827	./.	0/0:20,0:20:24.08:0,24,711	0/0:22,0:22:33.10:0,33,984	0/0:19,0:19:21.07:0,21,672	0/0:18,0:18:30.10:0,30,961	1/1:11,4:15:12.04:240,12,0	0/0:11,0:24:24.08:0,24,628	1/1:1,4:5:12.04:240,12,0
chr10	100294977	.	CG	C	6699.86	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=17.989;DP=701;FS=11.120;HRun=2;HaplotypeScore=95.4120;InbreedingCoeff=0.9836;MQ=70.41;MQ0=0;MQRankSum=-5.421;QD=34.71;ReadPosRankSum=-1.948;VQSLOD=3.2664;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,2090	0/0:11,0:11:33.11:0,33,495	0/0:13,0:13:15.64:0,16,267	0/0:11,0:12:7.52:0,8,202	0/0:33,0:33:96.30:0,96,1400	1/1:3,28:31:90.24:1115,90,0	1/1:4,19:23:60.15:753,60,0	1/1:4,29:33:87.28:1125,87,0	1/1:0,15:15:45.15:583,45,0	0/0:36,0:36:99:0,102,1512	0/0:21,0:21:60.19:0,60,877	0/0:29,0:29:84.28:0,84,1259	0/0:24,0:24:69.22:0,69,1010	0/0:27,0:27:81.27:0,81,1212	0/0:33,0:33:93.32:0,93,1392	1/1:1,26:27:81.25:1036,81,0	0/0:39,0:39:99:0,114,1685	1/1:1,10:11:30.10:384,30,0	0/0:26,0:26:78.23:0,78,1106	0/0:26,0:26:75.24:0,75,1103	1/1:3,22:25:54.18:699,54,0	0/0:28,0:28:84.27:0,84,1239	0/0:21,0:21:60.20:0,60,898	0/0:40,0:40:99:0,117,1750	0/0:20,0:20:60.20:0,60,897	1/1:1,21:22:21.31:771,21,0	0/0:22,0:22:63.14:0,63,876	1/1:0,6:6:18.06:233,18,0
chr10	100294983	.	TG	T	6146.76	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=17.702;DP=709;FS=6.786;HRun=3;HaplotypeScore=96.0245;InbreedingCoeff=0.9725;MQ=68.49;MQ0=0;MQRankSum=-7.946;QD=29.69;ReadPosRankSum=-0.815;VQSLOD=3.6820;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,1900	0/0:10,0:10:30.10:0,30,425	0/0:14,0:14:35.69:0,36,465	0/0:14,0:14:3.37:0,3,316	0/0:37,0:37:99:0,105,1502	1/1:1,31:32:84.22:1019,84,0	1/1:3,22:25:54.17:665,54,0	1/1:3,31:34:90.28:1112,90,0	1/1:1,15:16:48.15:594,48,0	0/0:34,0:34:96.32:0,96,1369	0/0:21,0:21:57.19:0,57,805	0/0:30,0:30:90.30:0,90,1296	0/0:22,0:22:63.16:0,63,849	0/0:28,0:28:78.26:0,78,1122	0/0:30,0:30:84.28:0,84,1209	1/1:4,26:30:72.22:881,72,0	0/0:41,0:41:99:0,120,1702	1/1:1,9:10:23.99:277,24,0	0/0:23,0:23:69.22:0,69,976	0/0:27,0:27:75.25:0,75,1076	1/1:3,26:29:54.05:651,54,0	0/0:28,0:28:81.27:0,81,1165	0/0:22,0:22:63.21:0,63,904	0/0:35,0:35:99:0,105,1511	0/0:20,0:20:57.19:0,57,819	1/1:5,18:23:19.97:689,20,0	0/0:22,0:22:63.21:0,63,905	1/1:0,8:8:21.07:258,21,0
chr10	100295149	.	T	TG	2525.20	PASS	AB=0.591;AC=17;AF=0.304;AN=56;BaseQRankSum=11.978;DP=601;FS=3.271;HRun=6;HaplotypeScore=71.1841;InbreedingCoeff=0.8935;MQ=87.80;MQ0=0;MQRankSum=-4.077;QD=17.42;ReadPosRankSum=-2.320;VQSLOD=3.1807;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.07:0,60,600	0/0:14,0:14:39.08:0,39,392	0/0:24,0:24:50.86:0,51,506	0/0:26,0:26:43.14:0,43,557	0/0:28,0:28:81.18:0,81,826	1/1:8,20:28:23.63:473,24,0	1/1:9,16:25:35.21:561,35,0	1/1:11,7:18:3.68:152,4,0	1/1:2,14:16:21.15:369,21,0	0/0:29,0:30:76.98:0,77,770	0/0:22,0:21:49.35:0,49,493	0/0:19,0:19:45.09:0,45,459	0/0:19,0:19:51.09:0,51,513	0/0:22,0:22:60.09:0,60,592	0/0:26,0:26:72.15:0,72,729	0/1:4,9:13:0.41:196,0,0	0/0:29,0:29:69.11:0,69,693	1/1:1,8:9:21.07:257,21,0	0/0:24,0:24:66.11:0,66,658	0/0:28,0:28:81.18:0,81,826	1/1:4,4:8:12.04:146,12,0	0/0:36,0:36:99:0,105,1046	0/0:17,0:17:51.10:0,51,513	0/0:24,0:24:63.09:0,63,627	0/0:22,0:22:60.13:0,60,611	1/1:4,13:17:2.88:310,3,0	0/0:23,0:23:69.16:0,69,703	1/1:3,8:11:21.07:257,21,0
chr10	100295582	.	C	CT	7207.87	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=18.317;DP=686;FS=2.200;HRun=6;HaplotypeScore=84.5378;InbreedingCoeff=0.9915;MQ=81.50;MQ0=0;MQRankSum=-2.576;QD=32.03;ReadPosRankSum=-0.750;VQSLOD=4.7942;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1127	0/0:6,0:6:12.03:0,12,122	0/0:22,0:22:45.09:0,45,458	0/0:16,0:17:38.96:0,39,365	0/0:28,0:28:81.18:0,81,821	1/1:2,31:33:90.28:1122,90,0	1/1:4,20:24:57.18:711,57,0	1/1:7,28:35:87.23:1043,87,0	1/1:1,18:19:51.16:636,51,0	0/0:18,0:18:51.11:0,51,516	0/0:18,0:18:45.10:0,45,459	0/0:20,0:20:51.10:0,51,514	0/0:31,0:31:78.14:0,78,777	0/0:29,0:29:84.19:0,84,857	0/0:30,0:30:87.18:0,87,877	1/1:3,29:32:81.25:1011,81,0	0/0:30,0:30:84.15:0,84,847	1/1:3,14:17:13.34:460,13,0	0/0:24,0:24:63.14:0,63,643	0/0:23,0:23:69.16:0,69,704	1/1:0,19:19:51.16:636,51,0	0/0:23,0:23:60.09:0,60,593	0/0:22,0:22:48.08:0,48,482	0/0:28,0:28:81.17:0,81,819	0/0:22,0:22:51.11:0,51,520	1/1:1,28:29:84.26:1029,84,0	0/0:30,0:29:84.11:0,84,826	1/1:0,17:17:45.14:561,45,0
chr10	100298359	.	TG	T	646.63	PASS	AB=1.000;AC=15;AF=0.288;AN=52;BaseQRankSum=5.983;DP=196;FS=15.594;HRun=6;HaplotypeScore=28.0332;InbreedingCoeff=0.7377;MQ=59.97;MQ0=19;MQRankSum=-5.165;QD=14.06;ReadPosRankSum=0.815;VQSLOD=1.2925;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:36.11:0,36,458	0/0:4,0:4:12.04:0,12,157	0/1:11,0:4:21.52:22,0,53	0/0:15,0:5:13.56:0,14,137	0/0:7,0:7:18.06:0,18,237	1/1:1,6:6:15.04:161,15,0	1/1:1,3:3:9.02:96,9,0	./.	1/1:1,5:5:12.03:127,12,0	0/0:3,0:3:9.03:0,9,118	0/0:7,0:6:12.04:0,12,157	0/0:6,0:4:9.03:0,9,114	0/0:6,0:6:18.05:0,18,223	0/0:10,0:9:15.05:0,15,198	0/0:6,0:6:3.01:0,3,39	1/1:2,4:4:9.02:97,9,0	0/0:10,0:8:21.06:0,21,263	1/1:0,3:3:9.02:97,9,0	0/0:5,0:1:3.01:0,3,39	0/0:8,0:8:15.05:0,15,197	1/1:1,4:3:9.02:96,9,0	0/0:7,0:6:15.04:0,15,184	0/0:8,0:7:18.05:0,18,219	0/0:13,0:12:24.08:0,24,316	0/0:7,0:7:15.05:0,15,197	1/1:0,4:4:12.03:129,12,0	0/0:6,0:6:12.04:0,12,158	./.
chr10	100298507	.	GA	G	1173.77	PASS	AC=16;AF=0.308;AN=52;BaseQRankSum=7.858;DP=194;FS=10.513;HRun=7;HaplotypeScore=28.9241;InbreedingCoeff=0.8267;MQ=56.10;MQ0=4;MQRankSum=-4.827;QD=20.24;ReadPosRankSum=-0.428;VQSLOD=1.6518;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:30.10:0,30,377	0/0:3,0:3:9.03:0,9,113	0/0:8,0:5:15.05:0,15,188	0/0:14,0:5:11.89:0,12,122	0/0:5,0:5:15.05:0,15,189	1/1:1,6:7:21.02:206,21,0	1/1:1,3:4:9.02:92,9,0	1/1:5,16:19:45.06:448,45,0	./.	0/0:8,0:8:24.08:0,24,300	0/0:11,0:11:21.07:0,21,264	0/0:9,0:8:21.07:0,21,264	0/0:3,0:3:9.03:0,9,113	0/0:1,0:1:3.01:0,3,38	0/0:6,0:6:18.06:0,18,226	1/1:0,2:2:6.01:61,6,0	0/0:20,0:20:54.17:0,54,679	1/1:2,7:8:18.04:184,18,0	0/0:8,0:7:21.07:0,21,264	0/0:4,0:4:12.04:0,12,151	1/1:1,3:4:6.01:61,6,0	./.	0/0:6,0:6:15.05:0,15,189	0/0:2,0:2:6.02:0,6,75	0/0:10,0:10:30.10:0,30,377	1/1:0,2:2:6.01:61,6,0	0/0:3,0:2:6.02:0,6,75	1/1:0,9:9:24.05:245,24,0
chr10	100298549	.	ATC	A	143.35	PASS	AB=0.970;AC=11;AF=0.196;AN=56;BaseQRankSum=7.032;DP=273;FS=0.000;HRun=0;HaplotypeScore=48.7993;InbreedingCoeff=0.5077;MQ=73.30;MQ0=0;MQRankSum=-6.829;QD=2.51;ReadPosRankSum=0.885;VQSLOD=1.1250;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.13:0,54,917	0/0:5,0:5:15.05:0,15,289	0/0:10,0:7:21.06:0,21,356	0/0:9,0:6:8.13:0,8,136	0/0:9,0:9:24.08:0,24,461	0/1:9,1:10:4.07:65,0,4	1/1:3,0:3:1.92:8,2,0	0/0:21,3:20:11.48:0,11,36	1/1:4,0:4:2.80:13,3,0	0/0:17,0:17:48.15:0,48,868	0/0:7,0:7:18.06:0,18,338	0/0:9,0:9:27.08:0,27,478	0/0:12,0:12:36.11:0,36,659	0/0:8,0:8:24.08:0,24,462	0/0:7,0:7:21.07:0,21,383	0/1:8,0:8:4.45:4,0,5	0/0:15,0:15:45.15:0,45,859	0/1:13,0:12:8.19:14,0,8	0/0:13,0:13:36.12:0,36,680	0/0:11,0:11:33.11:0,33,636	1/1:3,0:3:1.01:10,1,0	0/0:3,0:3:9.03:0,9,173	0/0:6,0:6:15.05:0,15,280	0/0:1,0:1:3.01:0,3,58	0/0:18,0:18:54.18:0,54,1012	0/0:8,0:8:10:0,10,75	0/0:6,0:5:18.06:0,18,326	1/1:14,2:16:8.97:159,9,0
chr10	100298550	.	TC	T	2470.12	PASS	AB=0.642;AC=16;AF=0.286;AN=56;BaseQRankSum=9.825;DP=274;FS=15.876;HRun=1;HaplotypeScore=35.7088;InbreedingCoeff=0.7404;MQ=73.42;MQ0=0;MQRankSum=-5.935;QD=27.75;ReadPosRankSum=-0.142;VQSLOD=1.7857;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.16:0,57,841	0/0:5,0:5:15.05:0,15,239	0/0:9,0:7:21.07:0,21,335	0/0:8,0:6:8.41:0,8,104	0/0:10,0:10:27.08:0,27,408	1/1:2,8:10:30:358,30,0	0/1:2,1:3:5.36:34,0,5	1/1:3,21:20:51.17:711,51,0	1/1:0,4:4:3.01:33,3,0	0/0:17,0:17:48.16:0,48,747	0/0:7,0:7:18.06:0,18,287	0/0:9,0:9:27.09:0,27,426	0/0:12,0:12:36.12:0,36,573	0/0:8,0:8:24.08:0,24,382	0/0:7,0:7:20.98:0,21,259	1/1:0,8:8:18.06:242,18,0	0/0:15,0:15:45.14:0,45,694	1/1:0,13:12:30.10:402,30,0	0/0:13,0:13:36.12:0,36,555	0/0:12,0:12:36.11:0,36,551	1/1:0,3:3:6.02:74,6,0	0/0:3,0:3:9.03:0,9,144	0/0:6,0:6:15.05:0,15,239	0/0:1,0:1:3.01:0,3,48	0/0:18,0:18:54.12:0,54,810	0/1:1,7:8:23.86:254,0,24	0/0:6,0:5:18.02:0,18,238	1/1:2,14:16:46.57:551,47,0
chr10	100298695	.	ACACGCG	A	2748.86	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=13.542;DP=648;FS=8.857;HRun=0;HaplotypeScore=125.9358;InbreedingCoeff=0.7543;MQ=55.56;MQ0=10;MQRankSum=-0.994;QD=11.65;ReadPosRankSum=1.079;VQSLOD=2.1244;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:75.28:0,75,3392	0/0:8,0:8:21.07:0,21,575	0/0:34,0:10:20.32:0,20,414	0/0:46,0:23:35.10:0,35,1213	0/0:12,0:12:33.11:0,33,913	1/1:22,0:22:37.70:370,38,0	1/1:25,3:28:28.43:194,28,0	1/1:31,3:34:92.81:1298,93,0	0/1:14,0:14:61.37:61,0,85	0/0:10,0:10:9.57:0,10,566	0/0:8,0:8:21.07:0,21,617	0/0:17,0:17:42.14:0,42,1139	0/0:30,0:30:84.28:0,84,2134	0/0:18,0:18:48.16:0,48,1287	0/0:21,0:21:57.15:0,57,1672	1/1:18,0:18:8.63:50,9,0	0/0:42,0:42:99:0,120,3443	1/1:24,3:27:3.84:324,4,0	0/0:18,0:16:46.71:0,47,1092	0/0:13,0:13:36.05:0,36,746	1/1:71,2:73:71.14:396,71,0	0/0:10,0:10:30.10:0,30,843	0/0:13,0:13:39.09:0,39,1137	0/0:45,0:45:99:0,120,3206	0/0:12,0:12:36.02:0,36,1124	0/1:13,0:13:72.50:218,0,73	0/0:12,0:12:36.12:0,36,1103	1/1:7,0:6:5.68:27,6,0
chr10	100298697	.	ACGCG	A	6113.47	PASS	AB=0.530;AC=16;AF=0.286;AN=56;BaseQRankSum=10.952;DP=644;FS=7.911;HRun=0;HaplotypeScore=94.3911;InbreedingCoeff=0.7933;MQ=56.92;MQ0=8;MQRankSum=-1.499;QD=26.24;ReadPosRankSum=1.274;VQSLOD=3.7509;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:75.61:0,76,2770	0/0:7,0:7:21.07:0,21,462	0/0:32,0:11:23.03:0,23,463	0/0:42,1:22:38.09:0,38,1069	0/0:12,0:12:33.11:0,33,739	1/1:11,11:22:37.78:711,38,0	1/1:3,25:28:30.10:575,30,0	1/1:3,30:33:96.27:1456,96,0	0/1:2,12:14:60.80:338,0,61	0/0:10,0:10:9.57:0,10,473	0/0:9,0:9:24.08:0,24,533	0/0:17,0:17:42.14:0,42,926	0/0:30,0:30:84.28:0,84,1835	0/0:19,0:19:51.17:0,51,1127	0/0:21,0:21:57.15:0,57,1351	1/1:0,17:18:15.02:261,15,0	0/0:43,0:43:99:0,123,2858	1/1:5,22:27:26.79:658,27,0	0/0:18,0:16:46.71:0,47,954	0/0:13,0:13:36.05:0,36,615	1/1:4,68:72:75.26:1474,75,0	0/0:10,0:10:30.10:0,30,708	0/0:14,0:14:42.10:0,42,929	0/0:45,0:45:99:0,126,2780	0/0:12,0:12:36.02:0,36,893	0/1:1,11:12:47.79:520,0,48	0/0:12,0:12:36.12:0,36,908	1/1:1,6:6:6.02:120,6,0
chr10	100298839	.	C	CA	10882.31	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.449;DP=793;FS=15.993;HRun=1;HaplotypeScore=96.8358;InbreedingCoeff=1.0000;MQ=89.33;MQ0=0;MQRankSum=-4.050;QD=42.68;ReadPosRankSum=0.517;VQSLOD=2.9672;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,154,2130	0/0:13,0:13:39.13:0,39,545	0/0:33,0:33:90.17:0,90,1183	0/0:32,0:32:87.28:0,87,1178	0/0:20,0:20:60.18:0,60,817	1/1:0,32:32:87.30:1389,87,0	1/1:4,18:22:54.18:861,54,0	1/1:1,31:32:96.31:1508,96,0	1/1:1,28:29:45.38:1301,45,0	0/0:36,0:36:99:0,102,1406	0/0:16,0:16:48.15:0,48,655	0/0:30,0:30:87.23:0,87,1164	0/0:37,0:37:99:0,105,1458	0/0:32,0:32:96.32:0,96,1337	0/0:33,0:33:95.62:0,96,1339	1/1:2,36:38:99:1582,99,0	0/0:33,0:33:99:0,99,1355	1/1:0,24:24:63.21:1007,63,0	0/0:31,0:31:90.30:0,90,1250	0/0:28,0:28:84.22:0,84,1131	1/1:0,17:17:48.16:767,48,0	0/0:16,0:16:48.12:0,48,648	0/0:30,0:30:87.28:0,87,1194	0/0:25,0:25:72.20:0,72,983	0/0:14,0:14:42.14:0,42,587	1/1:3,25:28:39.34:1173,39,0	0/0:27,0:27:78.21:0,78,1065	1/1:1,32:33:81.28:1294,81,0
chr10	100299390	.	GAA	G	3710.18	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=7.534;DP=599;FS=1.668;HRun=13;HaplotypeScore=77.5279;InbreedingCoeff=0.9176;MQ=71.91;MQ0=3;MQRankSum=-1.577;QD=19.74;ReadPosRankSum=2.658;VQSLOD=3.3785;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:36:89.74:0,90,1171	0/0:9,0:10:26.58:0,27,356	0/1:21,0:17:4.26:4,0,181	0/0:14,0:13:16.46:0,16,185	0/0:20,0:23:52.62:0,53,641	1/1:3,14:17:42.01:397,42,0	1/1:1,16:17:48.08:466,48,0	1/1:7,15:22:45.01:435,45,0	1/1:1,10:12:32.77:303,33,0	0/0:31,0:33:71.18:0,71,904	0/0:28,1:29:49.15:0,49,990	0/0:19,0:24:50.11:0,50,618	0/0:13,0:17:46.08:0,46,518	0/0:19,0:22:52.61:0,53,635	0/0:18,0:20:47.59:0,48,574	1/1:4,19:23:44.97:486,45,0	0/0:18,0:23:53.61:0,54,658	1/1:2,19:23:36.20:535,36,0	0/0:19,0:21:44.58:0,45,541	0/0:22,0:25:59.12:0,59,725	1/1:1,9:10:24.03:233,24,0	0/0:26,0:27:56.49:0,56,676	0/0:21,0:23:50.11:0,50,630	0/0:13,0:13:32.60:0,33,442	0/0:21,0:24:51.13:0,51,657	1/1:7,18:25:4.48:386,4,0	0/0:27,0:26:78.23:0,78,1070	1/1:0,17:17:48.08:465,48,0
chr10	100300874	.	AC	A	4027.21	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.719;DP=463;FS=0.800;HRun=6;HaplotypeScore=57.7368;InbreedingCoeff=0.9851;MQ=77.27;MQ0=0;MQRankSum=-2.491;QD=27.21;ReadPosRankSum=3.181;VQSLOD=4.2015;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:42.14:0,42,547	0/0:4,0:4:12.04:0,12,158	0/0:14,0:14:33.08:0,33,397	0/0:12,0:11:28.82:0,29,327	0/0:25,0:25:72.22:0,72,932	1/1:0,18:18:48.12:516,48,0	1/1:1,12:13:36.09:387,36,0	1/1:3,15:18:36.07:374,36,0	1/1:1,10:11:27.07:290,27,0	0/0:17,0:17:51.16:0,51,662	0/0:22,0:22:60.19:0,60,787	0/0:14,0:14:42.14:0,42,552	0/0:19,0:19:57.17:0,57,736	0/0:18,0:18:48.16:0,48,626	0/0:10,0:10:30.10:0,30,395	1/1:0,23:23:60.13:631,60,0	0/0:26,0:26:78.21:0,78,989	1/1:1,14:15:36.08:379,36,0	0/0:14,0:14:33.11:0,33,432	0/0:22,0:22:60.17:0,60,759	1/1:1,23:24:63.16:677,63,0	0/0:15,0:15:45.13:0,45,565	0/0:10,0:10:30.08:0,30,368	0/0:9,0:9:24.06:0,24,301	0/0:23,0:23:69.21:0,69,890	1/1:1,22:23:63.16:677,63,0	0/0:22,0:22:66.20:0,66,850	1/1:0,3:3:9.02:97,9,0
chr10	100300962	.	AT	A	3832.29	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.648;DP=537;FS=4.663;HRun=6;HaplotypeScore=50.5177;InbreedingCoeff=0.9653;MQ=66.61;MQ0=0;MQRankSum=-1.172;QD=27.77;ReadPosRankSum=1.172;VQSLOD=4.1200;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.17:0,51,669	0/0:5,0:5:15.05:0,15,197	0/0:9,0:7:20.94:0,21,218	0/0:6,0:6:11.95:0,12,124	0/0:19,0:19:57.19:0,57,749	1/1:2,14:16:45.09:474,45,0	1/1:0,16:16:33.08:355,33,0	1/1:6,21:27:63.13:662,63,0	1/1:0,18:18:45.11:484,45,0	0/0:23,0:23:66.16:0,66,833	0/0:20,0:20:54.17:0,54,698	0/0:16,0:16:48.13:0,48,603	0/0:25,0:25:75.22:0,75,958	0/0:20,0:20:60.20:0,60,788	0/0:29,0:29:84.25:0,84,1077	1/1:0,16:16:45.11:484,45,0	0/0:33,0:33:96.31:0,96,1260	1/1:0,17:17:51.13:548,51,0	0/0:36,0:36:96.29:0,96,1234	0/0:24,0:24:72.19:0,72,903	1/1:0,10:10:30.08:322,30,0	0/0:20,0:20:60.20:0,60,790	0/0:19,0:19:57.17:0,57,735	0/0:11,0:10:33.11:0,33,434	0/0:34,0:34:99:0,102,1342	1/1:2,14:16:8.64:440,9,0	0/0:31,0:31:87.27:0,87,1130	1/1:0,2:2:6.02:64,6,0
chr10	100301409	.	G	GGT	2173.55	PASS	AB=0.829;AC=18;AF=0.321;AN=56;BaseQRankSum=-4.912;DP=719;FS=6.349;HRun=0;HaplotypeScore=114.2175;InbreedingCoeff=0.2645;MQ=72.07;MQ0=4;MQRankSum=-0.061;QD=6.05;ReadPosRankSum=-2.371;VQSLOD=2.4437;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:42:11.67:174,12,0	0/0:6,0:6:6.01:0,6,66	0/0:43,0:27:5.69:0,6,44	0/1:30,0:19:0:0,0,0	0/1:22,0:22:13.72:14,0,260	0/1:16,7:26:48.27:163,0,48	1/1:19,5:26:9.03:136,9,0	1/1:37,0:37:3.28:214,3,0	0/1:13,7:20:36.42:318,0,36	0/0:24,0:24:12.50:0,12,133	0/0:13,0:13:3.01:0,3,33	0/0:23,0:29:32.58:0,33,307	0/0:24,0:24:21.05:0,21,232	0/0:16,0:17:26.90:0,27,279	0/0:25,0:28:29.56:0,30,266	0/1:22,16:40:24.09:499,0,24	0/0:31,0:33:21.72:0,22,354	1/1:12,12:26:0.65:341,1,0	0/0:16,0:17:8.35:0,8,79	0/1:20,1:21:20.76:21,0,208	1/1:31,11:44:7.58:95,8,0	0/0:21,0:21:27.07:0,27,298	0/0:20,0:23:20.50:0,21,174	0/0:20,0:19:23.86:0,24,233	0/0:25,0:30:32.75:0,33,326	0/1:11,9:20:3.14:326,0,3	0/0:30,0:30:26.57:0,27,270	0/1:4,1:5:27.15:39,0,27
chr10	100302829	.	AC	A	7032.82	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.994;DP=608;FS=1.399;HRun=3;HaplotypeScore=57.4370;InbreedingCoeff=0.9834;MQ=89.18;MQ0=0;MQRankSum=-5.383;QD=34.14;ReadPosRankSum=1.156;VQSLOD=5.3514;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:33.09:0,33,450	0/0:14,0:14:42.12:0,42,584	0/0:22,0:22:60.17:0,60,817	0/0:24,0:24:47.34:0,47,879	0/0:20,0:20:60.20:0,60,853	1/1:1,33:34:99:1224,99,0	1/1:1,24:25:66.21:818,66,0	1/1:3,35:38:99:1262,105,0	1/1:0,14:14:39.12:483,39,0	0/0:25,0:25:72.23:0,72,1015	0/0:26,0:26:78.25:0,78,1102	0/0:15,0:15:42.13:0,42,588	0/0:19,0:19:57.17:0,57,785	0/0:24,0:24:72.20:0,72,996	0/0:22,0:22:60.20:0,60,863	1/1:0,30:30:87.23:1061,87,0	0/0:24,0:24:72.24:0,72,1035	1/1:0,13:13:33.10:409,33,0	0/0:25,0:25:72.23:0,72,1020	0/0:20,0:20:60.16:0,60,808	1/1:0,21:21:63.20:781,63,0	0/0:14,0:14:36.12:0,36,506	0/0:30,0:30:90.27:0,90,1255	0/0:16,0:16:42.05:0,42,541	0/0:18,0:18:51.16:0,51,715	1/1:2,27:29:38.05:922,38,0	0/0:32,0:32:96.29:0,96,1340	1/1:0,2:2:6.02:74,6,0
chr10	100305039	.	G	GCACTGTCATA	24471.56	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=0.953;DP=742;FS=20.520;HRun=0;HaplotypeScore=214.2446;InbreedingCoeff=0.9753;MQ=76.34;MQ0=0;MQRankSum=-17.911;QD=104.58;ReadPosRankSum=-3.168;VQSLOD=3.2886;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:13,12:27:45.15:2249,45,0	0/0:16,0:16:39.12:0,39,1099	0/0:22,0:22:41.78:0,42,790	0/0:14,0:14:24.08:0,24,728	0/0:40,0:40:99:0,114,3554	1/1:17,19:39:69.24:3509,69,0	1/1:10,9:21:45.15:2141,45,0	1/1:29,9:42:99:4320,106,0	1/1:7,13:22:54.19:2686,54,0	0/0:37,0:37:93.32:0,93,2945	0/0:19,0:19:54.19:0,54,1681	0/0:36,0:36:99:0,99,2977	0/0:28,0:28:69.23:0,69,2076	0/0:38,0:38:96.33:0,96,3000	0/0:24,0:24:72.24:0,72,2156	1/1:8,15:24:60.21:3084,60,0	0/0:31,0:31:75.26:0,75,2383	1/1:0,2:2:6.02:310,6,0	0/0:23,0:23:66.23:0,66,1924	0/0:42,0:42:99:0,108,3328	1/1:11,6:19:36.12:1813,36,0	0/0:35,0:35:99:0,99,3034	0/0:15,0:15:39.13:0,39,1178	0/0:29,0:29:75.26:0,75,2371	0/0:30,0:30:87.28:0,87,2638	1/1:11,18:31:84.27:3895,84,0	0/0:29,0:29:78.27:0,78,2415	1/1:4,2:6:9.03:465,9,0
chr10	100305853	.	CTT	C	821.23	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=7.712;DP=265;FS=9.281;HRun=12;HaplotypeScore=45.2413;InbreedingCoeff=0.7779;MQ=72.81;MQ0=2;MQRankSum=-4.581;QD=13.69;ReadPosRankSum=2.329;VQSLOD=0.9522;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:11:22.33:0,22,79	0/0:4,0:4:12.04:0,12,179	0/0:25,1:11:16.10:0,16,208	0/0:19,0:8:8.75:0,9,83	0/0:12,0:12:27.05:0,27,375	1/1:3,6:9:24.04:236,24,0	1/1:0,1:1:3.01:31,3,0	1/1:3,5:10:14.78:185,15,0	1/1:1,0:4:5.42:23,5,0	0/0:15,0:15:24.02:0,24,307	0/0:5,0:5:15.05:0,15,220	0/0:5,0:5:12.04:0,12,179	0/0:8,0:8:15.05:0,15,216	0/0:2,0:2:6.02:0,6,87	0/0:4,0:4:9.03:0,9,135	./.	0/0:28,0:28:58.04:0,58,820	1/1:7,0:9:16.39:70,16,0	0/0:15,0:15:27.09:0,27,400	0/0:9,0:10:11.50:0,11,100	1/1:3,2:5:3:30,3,0	0/0:4,0:4:6:0,6,69	0/0:4,0:4:5.98:0,6,64	0/0:3,0:3:3.01:0,3,45	0/0:21,0:21:45.15:0,45,665	1/1:7,11:18:29.09:338,29,0	0/0:5,0:6:15.01:0,15,173	1/1:1,3:4:9.02:89,9,0
chr10	100305861	.	T	TTA	144.25	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=4.139;DP=233;FS=0.000;HRun=0;HaplotypeScore=43.0872;InbreedingCoeff=0.4263;MQ=63.25;MQ0=3;MQRankSum=-2.641;QD=4.97;ReadPosRankSum=1.435;VQSLOD=1.8836;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:26.79:0,27,203	0/0:4,0:4:12.04:0,12,171	0/0:26,0:9:17.04:0,17,205	0/0:18,0:5:2.41:0,2,49	0/0:9,0:9:27.01:0,27,358	0/0:8,0:9:3.60:0,4,48	0/0:1,0:1:2.98:0,3,21	0/1:18,0:18:15.06:15,0,86	1/1:3,1:4:5.93:51,6,0	0/0:12,0:12:33.03:0,33,384	0/0:5,0:5:15.05:0,15,213	0/0:5,0:4:12.04:0,12,171	0/0:5,0:5:15.05:0,15,213	0/0:3,0:3:9.02:0,9,112	0/0:3,0:3:9.03:0,9,128	0/0:1,0:1:2.96:0,3,19	0/0:22,0:22:63.10:0,63,828	1/1:3,4:7:17.99:194,18,0	0/0:14,0:14:36.07:0,36,457	0/0:4,0:4:12.01:0,12,120	0/0:4,0:4:0.89:0,1,2	0/0:3,0:3:9.01:0,9,95	0/0:3,0:3:8.98:0,9,89	0/0:2,0:2:6:0,6,67	0/0:15,0:15:45.15:0,45,640	0/0:16,0:16:26.14:0,26,118	0/0:5,0:5:14.76:0,15,154	0/0:5,0:3:4.86:0,5,13
chr10	100305868	.	TTTA	T	468.16	PASS	AB=0.900;AC=8;AF=0.148;AN=54;BaseQRankSum=5.211;DP=217;FS=1.653;HRun=0;HaplotypeScore=41.8221;InbreedingCoeff=0.1019;MQ=55.57;MQ0=2;MQRankSum=-5.098;QD=7.80;ReadPosRankSum=1.321;VQSLOD=1.8484;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:24.06:0,24,286	0/0:4,0:4:12.03:0,12,203	0/0:20,0:5:5.08:0,5,68	0/0:17,0:5:5.55:0,6,32	0/0:9,0:9:23.99:0,24,459	0/1:9,0:9:27.02:27,0,55	0/0:1,0:1:2.99:0,3,24	0/1:19,0:19:24.59:238,0,25	0/1:3,1:4:4.89:29,0,5	0/0:12,0:12:33.08:0,33,550	0/0:5,0:5:15.05:0,15,260	0/0:5,0:4:12.03:0,12,214	0/0:4,0:4:6:0,6,88	0/0:3,0:3:6.02:0,6,115	0/0:3,0:3:9.03:0,9,189	1/1:1,0:1:2.50:9,2,0	0/0:21,0:21:57.05:0,57,1032	0/1:2,4:6:5.06:125,0,5	0/0:14,0:14:30.08:0,30,504	0/0:3,0:3:6.01:0,6,99	./.	0/0:1,0:1:3.01:0,3,63	0/0:3,0:3:9.03:0,9,188	0/0:1,0:1:3.01:0,3,63	0/0:13,0:13:39.12:0,39,757	0/1:16,0:16:1.42:155,0,1	0/0:5,0:5:15.05:0,15,267	0/1:5,0:3:6.53:7,0,37
chr10	100306166	.	TA	T	5535.88	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=12.175;DP=421;FS=24.974;HRun=3;HaplotypeScore=46.3140;InbreedingCoeff=0.9683;MQ=79.46;MQ0=0;MQRankSum=-0.780;QD=32.19;ReadPosRankSum=0.382;VQSLOD=2.7630;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:16:36.11:446,36,0	0/0:6,0:6:18.06:0,18,256	0/0:19,0:19:51.16:0,51,698	0/0:11,0:11:18.06:0,18,252	0/0:7,0:7:21.07:0,21,298	1/1:0,27:27:60.19:744,60,0	1/1:0,7:7:18.06:223,18,0	1/1:0,38:38:99:1407,114,0	1/1:1,10:11:30.09:372,30,0	0/0:11,0:11:33.11:0,33,475	0/0:11,0:11:33.11:0,33,473	0/0:19,0:19:57.19:0,57,813	0/0:18,0:18:54.17:0,54,761	0/0:16,0:16:42.14:0,42,599	0/0:22,0:22:66.22:0,66,950	1/1:0,14:14:39.12:484,39,0	0/0:23,0:23:69.21:0,69,962	1/1:1,16:17:46.37:592,46,0	0/0:12,0:12:33.11:0,33,473	0/0:12,0:12:36.12:0,36,515	1/1:0,19:19:42.13:521,42,0	0/0:11,0:11:33.11:0,33,464	0/0:11,0:11:30.10:0,30,428	0/0:7,0:7:21.07:0,21,302	0/0:17,0:17:51.16:0,51,714	1/1:1,21:22:22.96:710,23,0	0/0:16,0:16:48.16:0,48,691	1/1:0,1:1:3.01:37,3,0
chr10	100306328	.	GA	G	1037.38	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.818;DP=610;FS=0.715;HRun=1;HaplotypeScore=58.8038;InbreedingCoeff=0.9371;MQ=93.50;MQ0=0;MQRankSum=-3.442;QD=33.46;ReadPosRankSum=0.734;VQSLOD=3.3066;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:81.18:1132,81,0	0/0:3,0:3:9.03:0,9,144	0/0:29,0:29:86.67:0,87,1222	0/0:27,0:27:58.45:0,58,1057	0/0:23,0:23:66.21:0,66,1031	0/0:31,0:31:93.32:0,93,1486	0/0:17,0:17:51.15:0,51,769	0/0:32,0:32:96.30:0,96,1472	0/0:22,0:22:66.23:0,66,1055	0/0:28,0:28:84.29:0,84,1343	0/0:26,0:26:75.26:0,75,1198	0/0:22,0:22:66.21:0,66,1032	0/0:23,0:23:69.24:0,69,1103	0/0:18,0:18:51.15:0,51,768	0/0:32,0:32:96.31:0,96,1509	0/0:26,0:26:78.27:0,78,1242	0/0:15,0:15:45.15:0,45,719	0/0:17,0:17:51.17:0,51,815	0/0:18,0:18:51.16:0,51,793	0/0:20,0:20:51.14:0,51,767	0/0:32,0:32:93.30:0,93,1454	0/0:19,0:19:57.18:0,57,884	0/0:21,0:21:63.19:0,63,982	0/0:15,0:15:42.12:0,42,636	0/0:9,0:9:27.09:0,27,430	0/0:19,0:19:57.18:0,57,871	0/0:29,0:29:87.30:0,87,1381	0/0:6,0:6:18.03:0,18,239
chr10	100306897	.	G	GT	4851.10	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-6.119;DP=394;FS=10.282;HRun=8;HaplotypeScore=42.1858;InbreedingCoeff=0.9862;MQ=82.84;MQ0=0;MQRankSum=-0.788;QD=26.51;ReadPosRankSum=-0.393;VQSLOD=4.6739;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.02:0,69,627	0/0:8,0:8:23.98:0,24,212	0/0:15,0:15:26.54:0,27,214	0/0:10,0:10:18:0,18,163	0/0:14,0:14:39.02:0,39,357	1/1:2,21:23:60.18:692,60,0	1/1:1,12:13:30.09:346,30,0	1/1:4,23:27:71.22:790,71,0	1/1:3,12:15:30.09:346,30,0	0/0:24,0:24:63.02:0,63,574	0/0:11,0:11:27.01:0,27,247	0/0:10,0:10:30.02:0,30,274	0/0:14,0:14:38.98:0,39,349	0/0:9,0:9:23.98:0,24,212	0/0:11,0:11:27:0,27,243	1/1:1,10:11:14.83:173,15,0	0/0:14,0:14:33.01:0,33,302	1/1:0,8:8:24.07:277,24,0	1/1:3,9:12:30.05:331,30,0	1/1:0,9:9:24.02:261,24,0	1/1:1,16:17:42.12:485,42,0	0/0:12,0:12:33.02:0,33,302	0/0:11,0:11:33.02:0,33,302	0/0:12,0:12:29.96:0,30,266	0/0:11,0:11:29.99:0,30,266	1/1:4,19:23:35.43:630,35,0	1/1:2,17:19:36.11:415,36,0	1/1:0,6:6:9.03:104,9,0
chr10	100306989	.	G	GTTTA	1885.17	PASS	AB=1.000;AC=19;AF=0.352;AN=54;BaseQRankSum=9.259;DP=297;FS=3.095;HRun=0;HaplotypeScore=56.0995;InbreedingCoeff=0.5867;MQ=76.78;MQ0=2;MQRankSum=-3.739;QD=14.96;ReadPosRankSum=1.042;VQSLOD=2.6698;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:71.06:71,0,288	0/0:4,0:4:12.04:0,12,208	0/0:14,0:11:33.04:0,33,544	0/0:9,0:7:17.99:0,18,261	0/0:14,0:14:42.12:0,42,718	1/1:9,0:20:39.07:627,39,0	./.	0/1:19,0:19:13.03:95,0,13	0/0:7,0:7:2.99:0,3,30	0/0:17,0:17:51.14:0,51,900	0/0:10,0:10:30.09:0,30,493	0/0:10,0:10:26.81:0,27,420	0/0:10,0:10:30.10:0,30,526	0/0:8,0:8:23.97:0,24,343	0/0:9,0:9:27.09:0,27,507	1/1:8,0:8:2.37:70,2,0	0/0:27,0:27:75.24:0,75,1373	1/1:1,9:10:9.03:213,9,0	1/1:4,4:9:13.89:194,14,0	1/1:9,0:9:1.94:25,2,0	1/1:7,1:8:9.90:147,10,0	0/0:2,0:2:6.02:0,6,101	0/0:8,0:8:24.05:0,24,340	0/0:2,0:2:2.51:0,3,48	0/0:17,0:17:51.13:0,51,844	0/1:7,0:7:27.40:72,0,27	1/1:13,2:15:8.97:200,9,0	1/1:5,4:9:15.05:355,15,0
chr10	100306990	.	C	CTTAT	2451.69	PASS	AB=1.000;AC=21;AF=0.477;AN=44;BaseQRankSum=5.567;DP=305;FS=2.725;HRun=0;HaplotypeScore=59.9587;InbreedingCoeff=0.6691;MQ=74.70;MQ0=2;MQRankSum=-3.293;QD=18.86;ReadPosRankSum=-1.318;VQSLOD=2.5752;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,5:15:18.05:384,18,0	0/0:4,0:4:6.02:0,6,94	./.	./.	0/0:14,0:14:21.05:0,21,305	1/1:23,0:23:48.10:780,48,0	./.	0/1:20,0:20:15.22:105,0,15	0/0:7,0:7:3.01:0,3,32	0/0:17,0:17:15.05:0,15,229	0/0:10,0:10:6.02:0,6,94	0/0:9,0:9:9.02:0,9,119	0/0:10,0:10:6.02:0,6,94	0/0:8,0:8:6.02:0,6,94	0/0:8,0:9:12.02:0,12,146	1/1:8,0:8:3.01:71,3,0	0/0:27,0:27:39.13:0,39,610	1/1:12,0:12:12.04:262,12,0	1/1:9,0:9:12.02:215,12,0	./.	1/1:9,0:9:9.03:191,9,0	./.	./.	1/1:2,0:2:0.47:1,0,0	0/0:17,0:17:12:0,12,142	1/1:8,0:8:6.01:55,6,0	1/1:15,0:15:9.03:199,9,0	1/1:9,0:9:15.05:354,15,0
chr10	100308222	.	T	TG	474.78	PASS	AB=0.731;AC=1;AF=0.018;AN=56;BaseQRankSum=5.793;DP=625;FS=24.847;HRun=1;HaplotypeScore=88.0490;InbreedingCoeff=-0.0190;MQ=79.56;MQ0=0;MQRankSum=-5.724;QD=12.49;ReadPosRankSum=1.014;VQSLOD=0.9882;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.03:0,48,605	0/0:13,4:17:40.82:0,41,507	0/0:22,0:22:66.15:0,66,865	0/0:23,0:23:66.18:0,66,873	0/0:21,9:30:63.35:0,63,783	0/0:28,0:28:81.18:0,81,1087	0/0:7,0:7:21.07:0,21,294	0/0:39,0:39:99:0,111,1530	0/0:13,0:13:36.12:0,36,502	0/1:24,14:38:99:549,0,889	0/0:21,8:29:62.49:0,62,805	0/0:24,1:25:73.09:0,73,986	0/0:29,0:29:81.22:0,81,1093	0/0:15,1:16:42.97:0,43,549	0/0:26,0:26:78.23:0,78,1069	0/0:22,0:22:66.17:0,66,881	0/0:10,0:10:30.10:0,30,419	0/0:10,0:10:27.09:0,27,377	0/0:18,0:18:54.18:0,54,753	0/0:37,0:37:99:0,108,1509	0/0:14,0:14:39.04:0,39,499	0/0:17,9:26:58.73:0,59,727	0/0:24,5:29:73.24:0,73,960	0/0:12,1:13:34:0,34,457	0/0:22,10:32:71.96:0,72,833	0/0:27,0:26:81.24:0,81,1090	0/0:23,0:23:63.21:0,63,877	0/0:5,0:5:15.05:0,15,209
chr10	100309377	.	TA	T	4839.11	PASS	AB=0.907;AC=26;AF=0.464;AN=56;BaseQRankSum=8.850;DP=618;FS=3.360;HRun=11;HaplotypeScore=65.6422;InbreedingCoeff=0.8604;MQ=74.02;MQ0=0;MQRankSum=-0.231;QD=16.40;ReadPosRankSum=1.397;VQSLOD=5.8436;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,2:43:80.58:0,81,1050	0/0:8,1:9:2.42:0,2,231	0/0:17,0:17:11.89:0,12,216	0/0:13,0:11:15.71:0,16,127	0/0:26,0:26:51.08:0,51,530	1/1:5,24:29:62.92:517,63,0	1/1:5,17:22:41.94:345,42,0	1/1:4,21:26:62.90:514,63,0	1/1:1,21:22:59.93:493,60,0	0/0:30,1:31:41.51:0,42,641	0/1:18,2:20:1.21:1,0,382	0/1:17,2:19:4.20:4,0,351	0/0:19,0:19:54.12:0,54,567	0/0:31,2:33:41.45:0,41,613	0/0:24,0:24:60.15:0,60,639	1/1:4,24:28:68.91:565,69,0	0/0:20,1:22:35.43:0,35,560	1/1:3,8:11:20.97:172,21,0	1/1:6,12:19:34.96:274,35,0	1/1:1,28:31:78.96:627,79,0	1/1:2,13:15:38.95:320,39,0	0/0:15,0:15:8.43:0,8,281	0/0:23,0:24:32.32:0,32,504	0/0:18,1:19:26.47:0,26,474	0/0:26,0:26:47.58:0,48,711	1/1:3,19:22:56.90:463,57,0	1/1:6,20:26:53.91:443,54,0	1/1:0,5:5:11.99:99,12,0
chr10	100309902	.	GTTT	G	313.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.835;DP=527;FS=1.169;HRun=10;HaplotypeScore=92.9366;InbreedingCoeff=0.9458;MQ=76.02;MQ0=0;MQRankSum=-1.556;QD=19.62;ReadPosRankSum=0.284;VQSLOD=1.8249;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,12:16:30.08:408,30,0	0/0:5,0:5:12.04:0,12,231	0/0:15,0:14:15.54:0,16,339	0/0:15,0:14:19.55:0,20,253	0/0:26,0:27:75.24:0,75,1470	0/0:25,0:25:69.23:0,69,1384	0/0:14,0:14:36.12:0,36,745	0/0:31,0:34:99:0,99,1865	0/0:13,0:13:33.11:0,33,684	0/0:24,0:26:69.22:0,69,1309	0/0:16,0:16:42.14:0,42,848	0/0:11,0:12:33.09:0,33,629	0/0:32,0:33:87.30:0,87,1756	0/0:10,0:11:30.03:0,30,539	0/0:17,0:17:51.17:0,51,1025	0/0:17,0:17:48.16:0,48,980	0/0:19,0:20:54.63:0,55,1067	0/0:14,0:14:42.14:0,42,851	0/0:24,0:25:66.21:0,66,1312	0/0:29,0:29:81.28:0,81,1589	0/0:23,0:23:63.22:0,63,1274	0/0:11,0:11:30.10:0,30,621	0/0:20,0:20:51.16:0,51,987	0/0:13,0:14:30.10:0,30,592	0/0:19,0:19:51.17:0,51,959	0/0:18,0:19:54.15:0,54,1026	0/0:27,0:27:66.23:0,66,1351	0/0:7,0:7:21.07:0,21,388
chr10	100311858	.	ATGTGTGTGTGTGTGTGTGTGTGTG	A	5543	PASS	AB=0.715;AC=20;AF=0.357;AN=56;BaseQRankSum=9.511;DP=567;FS=4.806;HRun=0;HaplotypeScore=283.5382;InbreedingCoeff=0.7443;MQ=62.36;MQ0=16;MQRankSum=-5.029;QD=21.57;ReadPosRankSum=-1.815;VQSLOD=3.1648;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:28:14.86:0,15,205	0/0:8,0:7:12.04:0,12,907	0/0:32,0:20:15.05:0,15,362	0/0:35,0:23:17.58:0,18,418	0/0:16,0:16:30.09:0,30,1895	1/1:7,17:24:15.05:696,15,0	1/1:8,16:23:3.01:116,3,0	1/1:22,16:38:44.81:543,45,0	1/1:5,19:24:27.09:1088,27,0	0/0:19,0:20:42.13:0,42,2172	0/0:6,0:6:15.05:0,15,903	0/0:17,0:17:30.09:0,30,1622	0/0:28,0:28:51.10:0,51,3237	0/0:18,0:18:33.03:0,33,2352	0/0:18,0:18:30.10:0,30,2437	1/1:7,19:27:19.34:998,19,0	0/0:26,0:26:54.63:0,55,3783	1/1:16,0:14:5.93:44,6,0	0/1:15,6:21:3.20:608,0,3	0/1:6,8:15:49.78:50,0,245	1/1:25,0:21:6:115,6,0	0/0:5,0:5:12.04:0,12,928	0/0:12,0:13:21.03:0,21,1357	0/0:20,0:19:45.15:0,45,3593	0/0:13,0:12:21.06:0,21,1698	1/1:13,12:24:24.57:911,25,0	1/1:6,12:18:5.04:375,5,0	0/0:5,0:5:3.01:0,3,136
chr10	100312200	.	TTATA	T	177.39	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=3.790;DP=234;FS=1.847;HRun=0;HaplotypeScore=35.5809;InbreedingCoeff=0.4837;MQ=77.89;MQ0=0;MQRankSum=-0.103;QD=12.67;ReadPosRankSum=0.177;VQSLOD=2.4631;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:14:15.05:265,15,0	0/0:3,0:3:6.02:0,6,154	0/0:5,0:2:0.47:0,0,1	0/0:17,0:11:7.75:0,8,94	0/0:6,0:6:15.03:0,15,332	0/0:6,0:7:20.86:0,21,461	0/0:2,0:2:6.02:0,6,154	0/0:41,0:41:99:0,105,2602	0/0:5,0:5:9.03:0,9,231	0/0:9,0:9:18.06:0,18,462	0/0:8,0:8:24.08:0,24,616	0/0:3,0:3:9.03:0,9,231	0/0:7,0:6:15.04:0,15,279	0/0:7,0:7:18.06:0,18,424	0/0:8,0:8:21.07:0,21,539	0/0:3,0:3:9.03:0,9,231	0/0:14,0:14:36.12:0,36,923	0/0:18,0:18:45.15:0,45,1117	0/0:14,0:14:33.11:0,33,842	0/0:4,0:4:9.03:0,9,225	0/0:4,0:4:12.04:0,12,308	0/0:1,0:1:3.01:0,3,77	0/0:2,0:2:3.01:0,3,77	./.	0/0:4,0:4:12.04:0,12,308	0/0:6,0:6:15.05:0,15,385	0/0:14,0:14:33.11:0,33,807	0/0:7,0:7:18.06:0,18,462
chr10	100312389	.	GTT	G	689.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.286;DP=447;FS=3.749;HRun=8;HaplotypeScore=91.8383;InbreedingCoeff=0.8222;MQ=78.09;MQ0=3;MQRankSum=-1.397;QD=28.71;ReadPosRankSum=-0.433;VQSLOD=3.6690;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:49.32:784,49,0	0/0:2,0:2:3.01:0,3,51	0/0:27,0:18:27.94:0,28,356	0/0:42,0:26:27.66:0,28,643	0/0:19,0:19:51.12:0,51,820	0/0:15,0:15:29.96:0,30,532	0/0:12,0:12:30.06:0,30,476	0/0:22,0:22:54.14:0,54,850	0/0:14,0:14:27.01:0,27,532	0/0:10,0:10:30.10:0,30,485	0/0:7,0:7:18.06:0,18,304	0/0:14,0:14:39.13:0,39,653	0/0:12,0:11:33.10:0,33,523	0/0:17,0:17:51.17:0,51,863	0/0:12,0:12:36.12:0,36,609	0/0:15,0:14:44.66:0,45,612	0/0:23,0:24:49.74:0,50,1021	0/0:19,0:18:38.97:0,39,593	0/0:16,0:15:44.87:0,45,625	0/0:9,0:9:24.08:0,24,399	0/0:13,0:13:13.26:0,13,395	0/0:11,0:11:33.11:0,33,554	0/0:10,0:10:30.02:0,30,441	0/0:21,0:21:63.16:0,63,1009	0/0:11,0:11:33.11:0,33,558	0/0:19,0:19:51.17:0,51,810	0/0:19,0:19:51.12:0,51,786	0/0:10,0:10:30.10:0,30,503
chr10	100312406	.	CTCTTTTCTTTTCTTT	C	5467.92	PASS	AB=0.958;AC=21;AF=0.375;AN=56;BaseQRankSum=-1.947;DP=470;FS=30.420;HRun=0;HaplotypeScore=199.7319;InbreedingCoeff=0.6970;MQ=66.83;MQ0=4;MQRankSum=-7.121;QD=32.94;ReadPosRankSum=3.414;VQSLOD=2.7663;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:45.02:0,45,874	0/0:7,0:7:18.02:0,18,479	0/0:20,0:11:0.47:0,0,1	0/0:39,0:21:0.33:0,0,1	0/0:23,0:23:57.20:0,57,2768	1/1:11,3:14:30.08:833,30,0	1/1:11,0:11:21.05:373,21,0	1/1:17,0:16:11.95:94,12,0	1/1:10,3:13:21.04:481,21,0	0/0:15,0:14:36.10:0,36,1509	0/0:9,0:9:24.07:0,24,954	0/0:16,0:14:33.10:0,33,724	0/0:12,0:11:27.08:0,27,605	0/0:23,0:23:54.14:0,54,1878	0/0:16,0:15:36.11:0,36,1242	1/1:13,3:15:7.69:759,8,0	0/0:29,0:29:63.13:0,63,1874	0/1:12,2:13:20.66:599,0,21	1/1:12,3:14:18.05:513,18,0	1/1:7,0:7:9.01:133,9,0	1/1:13,0:13:16.86:253,17,0	0/0:13,0:13:21.07:0,21,558	0/0:11,0:10:24.06:0,24,908	0/0:29,0:29:60.19:0,60,1909	0/0:14,0:14:27.08:0,27,1189	0/1:18,0:18:99:390,0,210	1/1:16,1:17:16.51:726,17,0	0/1:11,0:11:25.74:314,0,26
chr10	100312484	.	T	TTTTC	1703.67	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=13.706;DP=617;FS=34.967;HRun=0;HaplotypeScore=131.7298;InbreedingCoeff=0.2576;MQ=60.71;MQ0=16;MQRankSum=-9.075;QD=6.79;ReadPosRankSum=3.252;VQSLOD=1.1348;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,30:36:11.14:97,11,0	0/0:9,0:9:23.24:0,23,363	0/0:37,0:16:1.24:0,1,342	0/0:49,0:16:7.34:0,7,179	0/0:22,0:22:63.17:0,63,975	1/1:19,0:18:4.83:46,5,0	1/1:19,0:18:9.12:193,9,0	0/1:31,0:30:46.42:102,0,46	0/1:14,0:14:16.14:130,0,16	0/0:19,0:19:57.13:0,57,892	0/0:18,0:18:51.10:0,51,821	0/0:31,0:29:87.28:0,87,1416	0/0:16,0:15:45.15:0,45,747	0/0:19,0:19:33.19:0,33,731	0/0:29,0:28:52.68:0,53,1100	0/1:22,0:20:29.13:194,0,29	0/0:28,0:28:53.23:0,53,1054	1/1:17,0:17:22.59:217,23,0	0/1:14,0:12:17.41:70,0,17	0/1:9,0:9:18.57:51,0,19	0/1:8,0:8:5.70:90,0,6	0/0:18,0:18:54.17:0,54,895	0/0:18,0:16:22.35:0,22,605	0/0:33,0:33:77.71:0,78,1262	0/0:20,0:20:57.17:0,57,903	0/1:30,0:25:31.80:405,0,32	0/1:30,0:30:73.81:240,0,74	1/1:2,0:2:3.01:44,3,0
chr10	100313474	.	CA	C	1873.18	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.470;DP=673;FS=1.856;HRun=1;HaplotypeScore=131.0317;InbreedingCoeff=0.9954;MQ=82.62;MQ0=0;MQRankSum=-5.014;QD=34.69;ReadPosRankSum=2.960;VQSLOD=3.4375;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,54:54:99:1968,141,0	0/0:11,0:11:33.11:0,33,528	0/0:24,0:24:72.24:0,72,1102	0/0:18,0:18:47.45:0,47,679	0/0:28,0:28:84.29:0,84,1341	0/0:26,0:26:75.21:0,75,1170	0/0:21,0:21:63.18:0,63,960	0/0:19,0:19:57.18:0,57,849	0/0:17,0:17:51.17:0,51,813	0/0:23,0:23:66.21:0,66,1016	0/0:11,0:11:33.11:0,33,525	0/0:24,0:24:69.24:0,69,1103	0/0:27,0:27:81.25:0,81,1248	0/0:32,0:32:93.30:0,93,1461	0/0:25,0:25:75.24:0,75,1176	0/0:37,0:37:99:0,111,1773	0/0:30,0:30:90.28:0,90,1412	0/0:14,0:14:42.14:0,42,660	0/0:20,0:20:57.17:0,57,867	0/0:21,0:21:63.21:0,63,1007	0/0:25,0:25:75.26:0,75,1199	0/0:19,0:19:57.17:0,57,865	0/0:29,0:29:84.29:0,84,1341	0/0:31,0:31:93.32:0,93,1483	0/0:15,0:15:45.13:0,45,694	0/0:30,0:30:90.29:0,90,1396	0/0:35,0:35:99:0,105,1628	0/0:7,0:7:21.07:0,21,336
chr10	100313921	.	AT	A	5682.21	PASS	AB=0.955;AC=25;AF=0.446;AN=56;BaseQRankSum=11.227;DP=703;FS=0.303;HRun=10;HaplotypeScore=73.0116;InbreedingCoeff=0.9215;MQ=83.96;MQ0=0;MQRankSum=-1.820;QD=19.20;ReadPosRankSum=1.225;VQSLOD=5.6222;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.26:0,96,1062	0/0:13,0:13:39.09:0,39,423	0/0:20,1:21:18.82:0,19,380	0/1:20,1:21:12.85:13,0,263	0/0:39,2:41:99:0,99,1084	1/1:4,29:32:83.97:729,84,0	1/1:3,18:22:53.02:449,53,0	1/1:3,26:29:68.97:599,69,0	1/1:2,21:23:56.97:495,57,0	0/0:31,1:32:61.18:0,61,902	0/0:20,0:20:51.13:0,51,557	0/0:28,0:28:75.19:0,75,821	0/0:21,0:22:66.01:0,66,711	0/0:28,0:28:69.16:0,69,747	0/0:35,0:34:90.23:0,90,982	1/1:4,20:24:50.85:443,51,0	0/0:34,0:34:90.23:0,90,987	1/1:2,17:19:47.98:417,48,0	1/1:1,16:17:47.95:410,48,0	1/1:4,24:28:41.82:592,42,0	1/1:1,20:21:56.99:495,57,0	0/0:28,0:28:72.16:0,72,767	0/0:20,1:22:20.12:0,20,407	0/0:22,0:22:54.13:0,54,589	0/0:26,0:26:75.18:0,75,819	1/1:3,18:21:47.97:417,48,0	1/1:4,25:30:37.84:546,38,0	1/1:3,5:8:9:78,9,0
chr10	100314226	.	G	GA	1198.13	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.426;DP=690;FS=6.105;HRun=2;HaplotypeScore=67.3086;InbreedingCoeff=0.9998;MQ=90.02;MQ0=0;MQRankSum=-3.055;QD=38.65;ReadPosRankSum=0.453;VQSLOD=4.1448;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:31:80.54:1293,81,0	0/0:13,0:13:39.13:0,39,546	0/0:25,0:25:75.24:0,75,1014	0/0:29,0:29:78.24:0,78,1042	0/0:34,0:34:99:0,99,1384	0/0:24,0:24:72.22:0,72,988	0/0:20,0:20:60.20:0,60,834	0/0:34,0:34:93.31:0,93,1299	0/0:17,0:17:51.17:0,51,713	0/0:34,0:34:65.98:0,66,1334	0/0:23,0:23:66.22:0,66,923	0/0:26,0:26:78.26:0,78,1090	0/0:28,0:28:84.27:0,84,1159	0/0:22,0:22:66.22:0,66,923	0/0:33,0:33:96.31:0,96,1324	0/0:16,0:16:48.16:0,48,671	0/0:27,0:27:81.26:0,81,1115	0/0:30,0:30:90.27:0,90,1237	0/0:24,0:24:69.23:0,69,963	0/0:24,0:24:72.23:0,72,989	0/0:25,0:25:72.24:0,72,1002	0/0:28,0:28:84.27:0,84,1159	0/0:24,0:24:72.23:0,72,983	0/0:21,0:21:63.21:0,63,879	0/0:20,0:20:60.20:0,60,839	0/0:23,0:23:69.22:0,69,948	0/0:22,0:22:63.19:0,63,863	0/0:13,0:13:36.12:0,36,501
chr10	100315708	.	CTTTATTTATTTA	C	2307.95	PASS	AB=0.750;AC=21;AF=0.500;AN=42;BaseQRankSum=6.420;DP=336;FS=10.145;HRun=0;HaplotypeScore=115.0717;InbreedingCoeff=0.6534;MQ=61.79;MQ0=1;MQRankSum=-4.537;QD=14.99;ReadPosRankSum=-0.254;VQSLOD=1.5895;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:9:0.68:1,0,18	0/0:11,0:11:3.01:0,3,38	./.	./.	0/0:17,0:17:9.03:0,9,384	1/1:6,8:14:12.04:409,12,0	1/1:6,0:6:3.01:82,3,0	1/1:38,0:37:3.01:40,3,0	1/1:7,2:9:6.02:205,6,0	0/0:9,0:9:6.02:0,6,340	0/0:10,0:10:6.02:0,6,349	0/0:8,0:8:12.03:0,12,449	0/0:7,0:7:6.02:0,6,349	0/0:13,0:13:18.06:0,18,844	0/0:18,0:18:6.02:0,6,223	./.	0/0:26,0:25:45.09:0,45,2051	1/1:11,3:14:3.01:102,3,0	./.	1/1:10,4:14:15.03:433,15,0	1/1:6,0:6:6:73,6,0	./.	./.	./.	0/0:12,0:22:18.06:0,18,813	1/1:17,4:21:12.04:300,12,0	1/1:12,2:14:6.02:205,6,0	1/1:3,6:9:18.06:614,18,0
chr10	100321063	.	A	AAATC	12878.62	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-13.098;DP=711;FS=3.030;HRun=0;HaplotypeScore=111.2732;InbreedingCoeff=0.9958;MQ=70.93;MQ0=4;MQRankSum=-0.837;QD=39.14;ReadPosRankSum=-2.255;VQSLOD=4.1879;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:34:44.18:708,44,0	0/0:14,0:14:42.14:0,42,654	0/0:30,0:26:25.29:0,25,352	0/0:21,0:19:15.05:0,15,217	0/0:29,0:29:66.21:0,66,1029	1/1:7,15:21:39.13:924,39,0	1/1:3,17:20:36.12:865,36,0	1/1:12,10:26:42.09:696,42,0	1/1:10,16:25:45.15:1064,45,0	0/0:30,0:30:66.22:0,66,1042	0/0:29,0:29:63.21:0,63,985	0/0:18,0:18:33.10:0,33,506	0/0:25,0:25:51.10:0,51,730	0/0:19,0:19:30.10:0,30,477	0/0:19,0:19:45.15:0,45,706	1/1:7,18:25:51.18:1224,51,0	0/0:31,0:31:54.18:0,54,862	1/1:8,17:25:51.17:1187,51,0	1/1:13,11:24:33.07:710,33,0	1/1:11,31:43:90.19:1984,90,0	1/1:7,7:15:21.07:504,21,0	0/0:31,0:31:66.21:0,66,1009	0/0:25,0:25:57.18:0,57,874	0/0:28,0:28:66.23:0,66,1060	0/0:33,0:33:90.30:0,90,1409	1/1:6,18:25:57.18:1231,57,0	1/1:12,22:36:57.20:1349,57,0	1/1:2,6:8:18.06:432,18,0
chr10	100324392	.	GAA	G	7546.12	PASS	AB=0.541;AC=23;AF=0.411;AN=56;BaseQRankSum=8.653;DP=691;FS=4.499;HRun=10;HaplotypeScore=92.2949;InbreedingCoeff=0.9425;MQ=80.24;MQ0=1;MQRankSum=-1.709;QD=26.11;ReadPosRankSum=2.410;VQSLOD=5.0210;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:40:91.87:0,92,315	0/0:8,0:9:27.09:0,27,410	0/0:30,0:28:35.76:0,36,632	0/0:17,0:17:32.22:0,32,346	0/0:31,0:32:89.75:0,90,1362	1/1:3,27:30:81.21:903,81,0	1/1:3,20:23:45.11:502,45,0	1/1:3,22:25:66.14:727,66,0	1/1:3,24:26:66.17:736,66,0	0/0:28,0:28:75.24:0,75,1151	0/0:23,0:24:69.19:0,69,1009	0/0:26,0:26:72.23:0,72,1119	0/0:31,0:32:81.19:0,81,1213	0/0:27,0:27:78.27:0,78,1238	0/0:18,0:18:51.15:0,51,768	1/1:2,15:17:36.09:401,36,0	0/0:25,0:25:69.15:0,69,1021	1/1:0,15:15:39.11:435,39,0	1/1:4,18:23:41.39:492,41,0	1/1:4,33:37:87.20:968,87,0	1/1:0,21:21:57.15:635,57,0	0/0:21,0:22:62.69:0,63,941	0/0:26,0:26:60.19:0,60,907	0/0:19,0:20:56.64:0,57,799	0/0:25,0:25:72.24:0,72,1123	0/1:5,28:33:5.08:812,0,5	1/1:5,25:30:66.16:735,66,0	1/1:2,6:8:18.04:201,18,0
chr10	100325294	.	AGACTCT	A	16862.98	PASS	AB=0.510;AC=25;AF=0.446;AN=56;BaseQRankSum=17.047;DP=685;FS=0.610;HRun=0;HaplotypeScore=152.1662;InbreedingCoeff=0.9130;MQ=89.81;MQ0=0;MQRankSum=-19.572;QD=55.29;ReadPosRankSum=1.370;VQSLOD=5.1463;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:72.18:1610,72,0	0/0:13,0:13:39.13:0,39,1415	0/0:35,0:36:99:0,108,3322	0/0:27,0:26:66.20:0,66,1870	0/0:17,0:17:48.16:0,48,1718	1/1:0,20:20:51.18:1252,51,0	1/1:0,23:23:51.11:1161,51,0	1/1:1,26:27:78.25:1793,78,0	1/1:0,29:29:78.20:1793,78,0	0/0:17,0:17:51.18:0,51,1869	0/0:12,0:12:36.11:0,36,1174	0/0:33,0:33:96.27:0,96,3015	0/0:33,0:33:96.33:0,96,3443	0/0:28,0:28:84.29:0,84,2947	0/0:39,0:39:99:0,117,4046	1/1:0,29:29:72.25:1768,72,0	0/0:28,0:28:84.29:0,84,3013	1/1:1,18:19:39.13:924,39,0	1/1:1,13:14:42.12:840,42,0	1/1:0,16:16:42.14:958,42,0	1/1:1,21:22:29.86:493,30,0	0/0:19,0:19:57.18:0,57,2002	0/0:22,0:22:63.22:0,63,2202	0/0:29,0:29:87.26:0,87,3047	0/0:27,0:27:78.27:0,78,2732	0/1:1,24:25:40.74:1524,0,41	1/1:1,41:41:99:2601,108,0	1/1:0,4:4:6.02:147,6,0
chr10	100326353	.	C	CTTT	5764.75	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-2.699;DP=427;FS=5.181;HRun=11;HaplotypeScore=67.7063;InbreedingCoeff=0.8732;MQ=65.14;MQ0=0;MQRankSum=-2.417;QD=27.72;ReadPosRankSum=-4.851;VQSLOD=2.7034;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:18:20.49:250,20,0	0/0:6,0:6:11.98:0,12,140	0/0:3,0:3:5.97:0,6,55	0/1:7,0:7:1.85:2,0,8	0/0:17,0:21:52:0,52,576	1/1:3,10:16:30.08:513,30,0	1/1:1,3:4:6.02:113,6,0	1/1:11,17:33:69.17:1123,69,0	1/1:4,5:11:27.07:421,27,0	0/0:21,0:23:55.39:0,55,629	0/0:20,0:21:49.63:0,50,582	0/0:22,0:22:54.07:0,54,631	0/0:7,0:7:15.02:0,15,175	0/0:18,0:18:51.07:0,51,578	0/0:19,0:20:48.03:0,48,543	1/1:6,7:17:34.62:529,35,0	0/0:13,0:14:39.03:0,39,439	1/1:2,9:14:21.01:294,21,0	1/1:7,9:20:48.14:802,48,0	1/1:4,14:19:16.03:686,16,0	1/1:5,4:9:8.06:119,8,0	0/0:19,0:20:46.67:0,47,557	0/0:18,0:21:43.54:0,44,495	0/0:6,0:6:15.04:0,15,175	0/0:17,0:17:38.81:0,39,401	1/1:5,11:19:7:582,7,0	1/1:2,10:14:19.29:308,19,0	1/1:0,0:6:2.99:23,3,0
chr10	100336359	.	TTATC	T	4733.23	PASS	AC=26;AF=0.500;AN=52;BaseQRankSum=-1.335;DP=674;FS=5.033;HRun=0;HaplotypeScore=128.4679;InbreedingCoeff=0.8688;MQ=61.24;MQ0=6;MQRankSum=0.392;QD=15.07;ReadPosRankSum=-0.137;VQSLOD=4.3231;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:0.50:0,1,2	1/1:7,5:12:18.06:275,18,0	./.	./.	1/1:20,15:35:36.68:430,37,0	0/0:25,0:25:8.51:0,9,59	0/0:14,0:14:2.99:0,3,52	0/0:40,0:39:0:0,0,0	0/0:18,0:18:33.11:0,33,717	1/1:14,14:28:41.88:597,42,0	1/1:13,8:21:23.89:240,24,0	0/0:16,0:28:28.48:0,28,436	1/1:17,10:27:27.09:401,27,0	1/1:12,8:20:21.03:295,21,0	0/0:24,0:24:42.14:0,42,960	0/0:9,0:23:10.24:0,10,71	1/1:10,11:21:21:271,21,0	0/0:19,0:29:22.01:0,22,362	0/0:18,0:20:17.46:0,17,198	0/0:24,0:28:41.60:0,42,605	0/0:15,0:15:18.04:0,18,347	1/1:15,15:29:32.83:374,33,0	1/1:17,10:27:11.96:158,12,0	1/1:11,8:19:21.05:320,21,0	1/1:16,15:31:36.12:549,36,0	1/1:12,14:26:42.13:619,42,0	0/0:26,0:32:15.02:0,15,206	1/1:10,7:15:3.85:205,4,0
chr10	100336363	.	C	CTATCTATC	1280.70	PASS	AB=1.000;AC=18;AF=0.346;AN=52;BaseQRankSum=-4.283;DP=665;FS=1.374;HRun=0;HaplotypeScore=193.8145;InbreedingCoeff=0.7509;MQ=60.33;MQ0=7;MQRankSum=-1.732;QD=4.64;ReadPosRankSum=1.732;VQSLOD=2.8566;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:2.59:6,3,0	0/0:11,0:11:12.12:0,12,222	./.	./.	0/0:35,0:35:19.87:0,20,272	1/1:14,12:27:11.23:275,11,0	0/0:13,0:13:3.62:0,4,16	0/1:39,0:37:0:0,0,0	0/0:20,0:20:27.09:0,27,572	0/0:29,0:29:33.79:0,34,510	0/0:21,0:21:9.03:0,9,163	1/1:27,0:27:26.94:218,27,0	0/0:25,0:25:23:0,23,273	0/0:20,0:20:18.06:0,18,322	0/0:24,0:24:39.13:0,39,881	1/1:21,0:21:9.03:198,9,0	0/0:21,0:21:15.03:0,15,241	1/1:30,0:29:8.66:155,9,0	1/1:22,0:19:15:171,15,0	1/1:35,0:27:41.67:352,42,0	0/0:14,0:14:12.04:0,12,266	0/0:28,0:27:17.81:0,18,267	0/0:26,0:26:8.94:0,9,160	0/0:20,0:20:21.49:0,21,341	0/0:32,0:32:36.07:0,36,598	0/0:24,0:24:39.09:0,39,679	1/1:30,0:29:5.98:47,6,0	0/1:17,0:15:37.70:38,0,179
chr10	100336679	.	T	TTATC	1294.82	PASS	AB=0.886;AC=13;AF=0.260;AN=50;BaseQRankSum=-0.298;DP=466;FS=7.477;HRun=0;HaplotypeScore=90.4189;InbreedingCoeff=0.4398;MQ=43.40;MQ0=58;MQRankSum=0.134;QD=9.52;ReadPosRankSum=-0.758;VQSLOD=1.9675;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:17:5.88:0,6,51	0/0:9,0:9:12.04:0,12,185	./.	./.	1/1:17,6:23:21.06:399,21,0	./.	1/1:5,3:7:3.01:67,3,0	0/0:28,0:26:5.84:0,6,67	0/0:9,0:12:3:0,3,28	0/0:27,0:27:42.13:0,42,609	0/0:15,0:14:9.01:0,9,116	0/0:22,0:21:21.04:0,21,294	0/0:19,0:14:17.83:0,18,253	0/0:16,0:10:3.01:0,3,46	1/1:6,2:8:6.01:77,6,0	1/1:10,3:21:8.79:174,9,0	0/1:21,0:19:8:8,0,82	0/1:17,0:15:37.43:37,0,86	0/0:8,0:8:6.02:0,6,93	0/0:21,0:20:9.03:0,9,139	0/0:16,0:14:8.90:0,9,112	0/0:16,0:15:24.04:0,24,343	0/0:22,0:21:18.06:0,18,278	0/0:7,0:5:6.01:0,6,71	0/0:11,0:11:12.04:0,12,171	0/1:12,13:21:6.36:613,0,6	0/0:28,0:26:17.84:0,18,255	1/1:2,2:3:3.01:70,3,0
chr10	100336721	.	ATC	A	95.51	PASS	AB=0.930;AC=5;AF=0.100;AN=50;BaseQRankSum=3.012;DP=345;FS=10.843;HRun=0;HaplotypeScore=70.2436;InbreedingCoeff=0.0275;MQ=33.31;MQ0=68;MQRankSum=0.776;QD=1.65;ReadPosRankSum=-2.530;VQSLOD=0.1235;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,1:11:8.52:0,9,81	0/0:7,0:7:12.04:0,12,216	./.	./.	0/1:16,2:15:48.17:89,0,48	./.	0/0:6,0:5:1.21:0,1,3	0/0:18,0:11:29.88:0,30,414	1/1:10,0:7:0.47:1,0,0	0/0:19,0:17:47.83:0,48,810	0/0:10,0:9:9.01:0,9,132	0/0:16,0:13:21.07:0,21,372	0/0:19,0:13:21.05:0,21,337	0/0:9,0:4:3.01:0,3,55	0/0:12,0:8:6.01:0,6,76	0/0:16,0:15:11.94:0,12,143	0/1:14,0:11:48.21:48,0,98	0/1:14,2:12:53.91:54,0,141	0/0:5,0:4:12.04:0,12,201	0/0:13,0:13:9.03:0,9,164	0/0:11,0:7:9.03:0,9,161	0/0:18,0:16:24.08:0,24,431	0/0:18,0:16:18.02:0,18,328	0/0:8,0:5:6.01:0,6,80	0/0:7,0:6:12.04:0,12,190	0/0:23,0:17:0.70:0,1,503	0/0:15,0:13:17.98:0,18,299	0/0:4,0:1:3.01:0,3,35
chr10	100336767	.	A	ACCATCTATCTAT	880.44	PASS	AB=0.759;AC=17;AF=0.607;AN=28;BaseQRankSum=0.361;DP=293;FS=0.000;HRun=0;HaplotypeScore=46.7138;InbreedingCoeff=0.3718;MQ=22.59;MQ0=94;MQRankSum=-2.036;QD=7.16;ReadPosRankSum=0.970;VQSLOD=1.1360;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:9:5:24,5,0	./.	./.	./.	0/1:9,0:7:0:0,0,0	1/1:1,0:9:3.01:111,3,0	./.	1/1:23,0:14:38.82:373,39,0	./.	0/0:6,0:5:14.96:0,15,124	./.	./.	./.	./.	./.	1/1:7,2:6:2.94:18,3,0	0/0:4,0:4:2.90:0,3,16	1/1:7,0:7:8.98:291,9,0	1/1:7,0:4:8.95:68,9,0	0/0:0,11:17:0:0,0,0	0/1:4,0:2:0:0,0,0	./.	./.	./.	0/0:4,0:6:0.47:0,0,1	0/1:10,3:5:8.06:75,0,8	1/1:5,1:3:2.94:18,3,0	./.
chr10	100337390	.	A	ACCAT	4521.34	PASS	AB=0.526;AC=23;AF=0.460;AN=50;BaseQRankSum=-5.907;DP=382;FS=14.008;HRun=0;HaplotypeScore=56.9758;InbreedingCoeff=0.8257;MQ=41.63;MQ0=105;MQRankSum=-3.502;QD=27.74;ReadPosRankSum=-1.677;VQSLOD=2.8307;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:24.08:664,24,0	0/0:8,0:7:15.05:0,15,298	./.	./.	0/0:14,0:14:30.08:0,30,527	1/1:3,0:10:3.01:64,3,0	1/1:6,0:7:17.91:172,18,0	./.	1/1:3,15:11:27.09:743,27,0	0/0:22,0:18:53.97:0,54,683	0/0:18,0:18:27.09:0,27,522	0/0:8,0:6:12.04:0,12,232	0/0:9,0:6:12.03:0,12,198	0/0:14,0:6:15.05:0,15,296	0/0:14,0:10:30.05:0,30,536	1/1:3,8:3:6.02:167,6,0	0/0:12,0:10:24.07:0,24,435	1/1:1,6:8:6.02:166,6,0	1/1:4,4:4:12.02:231,12,0	1/1:6,16:23:9.30:637,9,0	0/1:1,9:10:6.58:399,0,7	0/0:14,0:12:30.10:0,30,588	0/0:13,0:13:30.06:0,30,491	0/0:4,0:4:9.03:0,9,178	0/0:23,0:23:45.10:0,45,813	1/1:2,13:12:35.88:612,36,0	1/1:6,11:9:12.04:335,12,0	1/1:1,11:11:12.04:332,12,0
chr10	100339520	.	A	AACAC	7796.19	PASS	AB=0.615;AC=24;AF=0.429;AN=56;BaseQRankSum=-5.679;DP=668;FS=10.333;HRun=0;HaplotypeScore=119.7414;InbreedingCoeff=0.7973;MQ=64.10;MQ0=18;MQRankSum=2.827;QD=25.07;ReadPosRankSum=-1.537;VQSLOD=3.5209;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:47:45.41:197,0,45	0/0:5,0:5:12.04:0,12,194	0/0:38,0:16:8.98:0,9,111	0/0:33,0:20:11.80:0,12,116	0/0:19,0:22:8.11:0,8,387	1/1:8,19:29:38.60:821,39,0	1/1:9,12:22:33.11:796,33,0	1/1:21,4:29:34.71:473,35,0	1/1:9,13:22:26.96:652,27,0	0/0:24,0:24:51.16:0,51,782	0/0:24,0:24:39.07:0,39,567	0/0:22,0:22:45.11:0,45,676	0/0:22,0:25:45.12:0,45,660	0/0:16,0:16:33.58:0,34,535	0/0:22,0:23:35.63:0,36,699	1/1:4,18:24:47.53:1094,48,0	0/0:35,0:39:59.77:0,60,814	1/1:11,8:23:2.85:456,3,0	1/1:8,6:11:21.04:399,21,0	1/1:14,6:20:15:307,15,0	1/1:9,11:20:21.96:482,22,0	0/0:22,0:22:33.04:0,33,427	0/0:22,0:26:38.96:0,39,614	0/0:16,0:16:24.08:0,24,388	0/0:18,0:19:42.06:0,42,605	0/1:5,11:17:13.18:640,0,13	1/1:5,26:32:56.59:1250,57,0	1/1:1,3:6:11.78:230,12,0
chr10	100342659	.	CTATT	C	4837.55	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=9.569;DP=606;FS=9.489;HRun=0;HaplotypeScore=103.0729;InbreedingCoeff=0.8882;MQ=65.22;MQ0=5;MQRankSum=1.502;QD=15.07;ReadPosRankSum=-1.939;VQSLOD=3.5264;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:99:302,0,271	0/0:13,0:13:33.07:0,33,566	0/0:13,0:7:9.10:0,9,128	0/0:14,0:12:21.83:0,22,407	0/0:37,0:37:99:0,108,2207	1/1:7,12:19:21.47:308,21,0	1/1:6,13:19:8.21:144,8,0	1/1:45,0:42:64.65:535,65,0	1/1:3,15:18:18.06:290,18,0	0/0:32,0:32:96.18:0,96,1916	0/0:25,0:25:72.09:0,72,1232	0/0:12,0:12:33.03:0,33,603	0/0:20,0:20:57.14:0,57,1133	0/0:13,0:13:30.10:0,30,671	0/0:21,0:21:55.39:0,55,1049	1/1:3,15:18:11.43:193,11,0	0/0:26,0:26:75.07:0,75,1412	1/1:3,20:23:22.41:342,22,0	1/1:4,12:16:36.39:365,36,0	1/1:14,19:33:43.82:590,44,0	1/1:13,2:15:12.89:147,13,0	0/0:5,0:5:11.97:0,12,249	0/0:13,0:13:36.09:0,36,688	0/0:5,0:5:15.05:0,15,326	0/0:36,0:36:99:0,108,2107	1/1:5,26:31:13.41:751,13,0	1/1:9,29:37:39.60:632,40,0	1/1:8,4:12:17.48:239,17,0
chr10	100345010	.	C	CTGTG	1653.23	PASS	AB=0.947;AC=21;AF=0.420;AN=50;BaseQRankSum=-0.896;DP=591;FS=2.255;HRun=0;HaplotypeScore=121.5211;InbreedingCoeff=0.6114;MQ=57.00;MQ0=24;MQRankSum=-0.184;QD=6.75;ReadPosRankSum=-0.745;VQSLOD=2.6141;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:7:2.90:0,3,17	./.	./.	0/0:16,0:16:20.61:0,21,253	1/1:22,1:21:8.87:161,9,0	0/1:24,0:22:31.37:214,0,31	1/1:32,0:31:11.86:103,12,0	1/1:20,0:19:14.86:185,15,0	0/0:24,0:23:17.07:0,17,246	0/0:15,0:18:17.98:0,18,170	0/0:19,0:19:36.11:0,36,504	0/0:10,0:10:18.46:0,18,219	0/0:23,0:22:26.16:0,26,322	0/0:22,0:22:21.04:0,21,276	0/1:15,2:16:20.54:224,0,21	0/0:39,0:37:31.26:0,31,495	1/1:15,2:18:14.84:236,15,0	1/1:18,0:17:9.02:96,9,0	1/1:9,0:9:2.96:19,3,0	0/1:34,1:34:24.39:26,0,24	0/0:11,0:11:12.15:0,12,132	0/0:9,0:10:5.96:0,6,79	0/0:31,0:38:54.15:0,54,754	0/0:13,0:13:21.05:0,21,249	1/1:13,5:18:15.98:229,16,0	1/1:14,1:15:18.70:276,19,0	1/1:8,5:12:3.01:70,3,0
chr10	100345062	.	GCGCA	G	43.60	PASS	AB=0.991;AC=8;AF=0.154;AN=52;BaseQRankSum=0.608;DP=510;FS=22.849;HRun=0;HaplotypeScore=109.0685;InbreedingCoeff=-0.0302;MQ=43.36;MQ0=51;MQRankSum=-2.086;QD=0.28;ReadPosRankSum=-0.433;VQSLOD=0.6307;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,3:27:2.98:22,3,0	0/0:7,0:7:5.98:0,6,84	./.	./.	0/1:24,0:22:10.52:11,0,381	0/0:18,0:16:10.85:0,11,147	0/0:35,0:26:11.64:0,12,133	0/0:14,0:11:28.89:0,29,419	0/0:20,0:18:20.28:0,20,297	0/0:21,0:20:19.23:0,19,601	0/1:13,0:13:15.27:15,0,192	0/0:15,0:15:24.99:0,25,595	0/0:16,0:12:8.20:0,8,248	0/0:22,0:22:21.14:0,21,431	0/0:17,0:16:24.20:0,24,347	0/0:16,0:14:9.50:0,10,194	0/1:38,0:34:66.27:66,0,763	0/1:16,0:15:11.31:11,0,336	0/1:17,1:15:9.26:9,0,220	0/0:8,0:6:3.01:0,3,60	0/0:45,0:36:18.37:0,18,310	0/0:7,0:5:7.75:0,8,87	0/0:7,0:7:12.02:0,12,147	0/0:36,0:34:65.43:0,65,899	0/1:16,0:15:33.21:33,0,354	0/0:18,0:14:5.66:0,6,231	0/0:17,0:15:16.25:0,16,360	0/0:8,0:7:5.99:0,6,50
chr10	100345064	.	GCA	G	180.62	PASS	AB=0.982;AC=13;AF=0.250;AN=52;BaseQRankSum=-0.653;DP=501;FS=8.747;HRun=0;HaplotypeScore=96.5425;InbreedingCoeff=-0.2406;MQ=43.08;MQ0=48;MQRankSum=-0.715;QD=0.74;ReadPosRankSum=1.203;VQSLOD=0.9585;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,3:29:2.94:19,3,0	0/0:9,0:9:3.48:0,3,41	./.	./.	0/1:23,0:21:25.29:25,0,246	0/0:14,2:15:8.44:0,8,80	0/0:36,0:27:7.22:0,7,81	0/0:13,0:10:23.50:0,24,275	0/0:18,0:17:12.10:0,12,164	0/1:21,0:20:24.66:25,0,366	0/1:11,0:11:5.30:5,0,101	0/0:14,0:14:15.77:0,16,366	0/1:17,0:13:32.44:32,0,147	0/0:22,0:22:5.44:0,5,227	0/1:15,0:14:3.57:4,0,155	0/1:13,1:12:13.95:14,0,87	0/1:37,1:34:78.23:78,0,407	0/1:16,1:16:34.91:35,0,187	0/1:20,0:17:4.16:4,0,163	0/0:8,1:7:3.01:0,3,40	0/0:46,0:37:13.26:0,13,197	0/0:7,0:5:8.92:0,9,83	0/0:6,0:5:6.94:0,7,52	0/0:34,0:32:2.20:0,2,432	0/1:17,0:16:55.43:55,0,192	0/1:17,1:14:18.96:19,0,147	0/0:13,1:13:15.68:0,16,230	0/0:7,0:6:4.24:0,4,28
chr10	100345096	.	GTGTGTGTGTGTGTA	G	759.86	PASS	AB=0.971;AC=17;AF=0.304;AN=56;BaseQRankSum=1.851;DP=539;FS=2.539;HRun=0;HaplotypeScore=146.9437;InbreedingCoeff=0.2661;MQ=50.17;MQ0=34;MQRankSum=-2.675;QD=3.19;ReadPosRankSum=-3.542;VQSLOD=1.6098;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:37:3.45:22,3,0	0/0:13,0:13:16.34:0,16,264	0/1:16,0:13:2.32:2,0,314	0/0:13,0:9:20.13:0,20,301	0/0:21,0:19:30.04:0,30,1375	1/1:12,1:12:0.89:2,1,0	0/1:23,8:27:11.51:12,0,30	1/1:8,0:8:8.05:76,8,0	0/0:19,0:18:7.32:0,7,65	0/0:34,0:33:82.47:0,82,2887	0/0:9,0:9:15.05:0,15,653	0/0:10,0:10:22.22:0,22,776	0/0:20,0:16:35.55:0,36,1097	0/0:20,0:20:30.98:0,31,1067	0/0:18,0:17:32.93:0,33,1675	0/0:12,0:11:3.44:0,3,21	0/0:41,0:37:59.70:0,60,2312	0/1:21,0:20:16.70:169,0,17	0/1:14,0:11:12.94:13,0,77	1/1:12,0:12:17.97:146,18,0	0/1:46,0:40:71.39:119,0,71	0/0:11,0:9:12.04:0,12,689	0/0:10,0:9:18.06:0,18,645	0/0:35,0:33:60.06:0,60,2545	0/0:15,0:14:27.08:0,27,1170	0/1:17,0:14:24.37:156,0,24	0/1:17,0:16:34.51:139,0,35	1/1:4,0:2:3.01:64,3,0
chr10	100345098	.	GTGTGTGTGTGTA	G	1068.86	PASS	AB=0.887;AC=23;AF=0.411;AN=56;BaseQRankSum=1.024;DP=536;FS=2.355;HRun=0;HaplotypeScore=135.5537;InbreedingCoeff=0.6427;MQ=52.06;MQ0=32;MQRankSum=-2.130;QD=4.33;ReadPosRankSum=-2.690;VQSLOD=2.2302;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:37:3.48:51,3,0	0/0:13,0:13:16.03:0,16,217	0/0:19,0:16:6.69:0,7,352	0/0:14,0:10:23.12:0,23,288	0/0:21,0:19:30.04:0,30,1196	0/1:7,6:12:0:0,0,0	1/1:30,1:27:4.93:25,5,0	1/1:7,0:7:12:111,12,0	1/1:8,11:18:2.01:15,2,0	0/0:33,0:32:81.52:0,82,2394	0/0:9,0:9:15.05:0,15,539	0/0:11,0:11:24.86:0,25,702	0/0:19,0:16:34.44:0,34,920	0/0:20,0:20:30.98:0,31,898	0/0:19,0:18:29.55:0,30,1396	1/1:9,2:10:2.99:24,3,0	0/0:40,0:36:58.36:0,58,1990	1/1:7,14:20:5.98:213,6,0	0/1:12,0:9:17.98:18,0,20	1/1:10,2:12:17.97:146,18,0	0/1:44,1:40:52.58:106,0,53	0/0:11,0:9:12.04:0,12,590	0/0:10,0:9:24.05:0,24,550	0/0:35,0:33:63.04:0,63,2210	0/0:15,0:14:27.08:0,27,973	1/1:17,0:14:19.73:259,20,0	1/1:6,11:16:5.91:177,6,0	1/1:2,2:2:3.01:109,3,0
chr10	100345102	.	GTGTGTGTA	G	973.82	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=0.334;DP=513;FS=0.632;HRun=0;HaplotypeScore=111.2888;InbreedingCoeff=0.7343;MQ=53.76;MQ0=30;MQRankSum=-2.285;QD=4.35;ReadPosRankSum=-2.537;VQSLOD=1.6246;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,17:35:3.46:63,3,0	0/0:13,0:13:15.41:0,15,138	0/0:20,0:17:2.85:0,3,313	0/0:18,0:14:35.11:0,35,377	0/0:22,0:20:33.03:0,33,866	0/1:11,0:10:0:0,0,0	1/1:27,0:24:5.31:26,5,0	1/1:8,0:8:14.65:130,15,0	1/1:19,0:18:2.51:16,3,0	0/0:33,0:32:77.35:0,77,1499	0/0:9,0:9:15.04:0,15,304	0/0:12,0:12:26.97:0,27,535	0/0:19,0:16:32.29:0,32,676	0/0:16,0:16:29.05:0,29,540	0/0:20,0:19:33.89:0,34,1008	1/1:13,0:12:8.99:74,9,0	0/0:37,0:33:51.80:0,52,1381	1/1:17,0:16:6.02:131,6,0	0/1:9,0:6:7.40:45,0,7	1/1:12,0:12:20.96:171,21,0	1/1:40,0:36:6.94:130,7,0	0/0:11,0:10:21.03:0,21,469	0/0:10,0:9:23.98:0,24,280	0/0:33,0:31:62.88:0,63,1545	0/0:16,0:15:30.06:0,30,634	1/1:12,0:10:20.98:215,21,0	1/1:16,0:15:5.41:103,5,0	1/1:4,0:2:3.01:62,3,0
chr10	100345872	.	A	AT	424.38	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.539;DP=491;FS=8.739;HRun=8;HaplotypeScore=47.7221;InbreedingCoeff=0.8887;MQ=73.49;MQ0=0;MQRankSum=-1.962;QD=24.96;ReadPosRankSum=-1.069;VQSLOD=3.6154;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:45.13:519,45,0	0/0:9,0:9:27.01:0,27,247	0/0:11,0:11:20.98:0,21,183	0/0:10,0:7:7.19:0,7,108	0/0:23,0:23:66.03:0,66,604	0/0:18,0:18:51.03:0,51,466	0/0:10,0:10:27:0,27,243	0/0:31,0:31:81.02:0,81,735	0/0:7,0:7:15:0,15,137	0/0:25,0:25:66:0,66,596	0/0:27,0:27:75.04:0,75,685	0/0:16,0:16:42.02:0,42,384	0/0:35,0:35:99:0,105,956	0/0:10,0:10:30.02:0,30,275	0/0:17,0:17:27:0,27,247	0/0:15,0:15:45.02:0,45,412	0/0:16,0:16:48.03:0,48,439	0/0:9,0:9:27.01:0,27,247	0/0:23,0:23:48:0,48,432	0/0:25,0:25:66.03:0,66,604	0/0:13,0:13:36.01:0,36,325	0/0:23,0:23:63.03:0,63,576	0/0:20,0:20:57.03:0,57,521	0/0:14,0:14:36.02:0,36,330	0/0:16,0:15:42.02:0,42,384	0/0:19,0:19:48.02:0,48,439	0/0:24,0:24:59.75:0,60,561	0/0:8,0:8:15.01:0,15,137
chr10	100346064	.	CGTGTGTGTGTGTGTGTGT	C	1903.23	PASS	AB=0.836;AC=17;AF=0.304;AN=56;BaseQRankSum=3.900;DP=604;FS=2.455;HRun=0;HaplotypeScore=198.6284;InbreedingCoeff=0.5562;MQ=54.83;MQ0=48;MQRankSum=-3.549;QD=11.97;ReadPosRankSum=-0.323;VQSLOD=2.4349;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:21:0:0,0,0	0/0:4,0:4:11.25:0,11,424	0/0:53,0:14:7.27:0,7,119	0/0:65,0:15:3.01:0,3,42	0/0:24,0:23:27.09:0,27,1518	0/0:7,5:12:0:0,0,0	0/0:16,7:21:2.99:0,3,24	1/1:27,0:27:9:82,9,0	1/1:9,4:12:12.51:510,13,0	0/0:19,0:20:27.06:0,27,985	0/0:16,0:16:21.06:0,21,1036	0/0:16,0:15:22:0,22,871	0/0:18,0:18:33.55:0,34,1102	0/0:24,0:21:30.10:0,30,1093	0/0:18,0:17:24.55:0,25,1568	1/1:8,5:16:5.98:135,6,0	0/0:23,0:20:24.08:0,24,1600	0/1:9,0:9:16.33:138,0,16	1/1:10,0:11:5.63:275,6,0	0/1:8,1:10:0.02:0,0,0	1/1:20,0:16:2.25:47,2,0	0/0:12,0:18:3.01:0,3,96	0/0:11,0:17:12.04:0,12,452	0/0:37,0:35:51.16:0,51,2675	0/0:29,0:27:45.15:0,45,2618	0/1:19,5:21:71.35:187,0,71	1/1:11,7:18:9.03:416,9,0	1/1:4,4:7:6.02:279,6,0
chr10	100347304	.	C	CTCTTTTTTTTAAG	2101.27	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.674;DP=646;FS=13.502;HRun=0;HaplotypeScore=219.4221;InbreedingCoeff=0.9963;MQ=72.21;MQ0=0;MQRankSum=-6.925;QD=91.36;ReadPosRankSum=-2.108;VQSLOD=1.8683;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,5:23:51.12:2196,51,0	0/0:10,0:10:27.05:0,27,910	0/0:12,0:12:30.08:0,30,946	0/0:20,0:19:54.13:0,54,1871	0/0:19,0:19:54.19:0,54,2007	0/0:22,0:22:66.21:0,66,2418	0/0:17,0:17:51.16:0,51,1631	0/0:31,0:31:72.23:0,72,2517	0/0:23,0:23:66.23:0,66,2454	0/0:34,0:34:99:0,102,3637	0/0:22,0:22:57.19:0,57,2229	0/0:23,0:23:57.20:0,57,1942	0/0:25,0:25:72.25:0,72,2712	0/0:24,0:24:60.21:0,60,2276	0/0:30,0:30:75.24:0,75,2756	0/0:30,0:30:78.26:0,78,2839	0/0:29,0:29:72.25:0,72,2537	0/0:26,0:26:69.17:0,69,2364	0/0:32,0:32:90.25:0,90,3063	0/0:21,0:21:63.17:0,63,2030	0/0:21,0:21:57.20:0,57,2004	0/0:30,0:30:84.27:0,84,3138	0/0:10,0:10:24.06:0,24,663	0/0:25,0:25:66.21:0,66,2459	0/0:26,0:26:78.27:0,78,2880	0/0:19,0:19:54.17:0,54,1831	0/0:26,0:26:78.27:0,78,2980	0/0:16,0:16:36.12:0,36,1365
chr10	100351463	.	A	AG	88.20	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=5.790;DP=684;FS=2.396;HRun=4;HaplotypeScore=61.6323;InbreedingCoeff=0.9301;MQ=50.29;MQ0=42;MQRankSum=-4.801;QD=4.20;ReadPosRankSum=0.313;VQSLOD=-0.3227;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:16:9.75:172,10,0	0/0:6,0:6:18.01:0,18,184	./.	./.	0/0:23,0:22:51.33:0,51,529	0/0:28,0:27:60.14:0,60,659	0/0:18,0:16:21.05:0,21,237	0/0:41,0:14:30.07:0,30,328	0/0:38,0:32:78.17:0,78,848	0/0:26,0:25:72.15:0,72,764	0/0:28,0:27:62.81:0,63,664	0/0:23,0:21:48.11:0,48,527	0/0:38,1:37:84.19:0,84,929	0/0:33,0:31:75.18:0,75,830	0/0:30,1:27:57.16:0,57,646	0/0:22,1:21:51.05:0,51,537	0/0:21,0:18:33.37:0,33,424	0/0:24,1:22:50.78:0,51,514	0/0:19,1:8:21.06:0,21,238	0/0:30,0:27:52.92:0,53,717	0/0:32,0:28:78:0,78,819	0/0:23,0:19:42.92:0,43,441	0/0:20,0:18:51.08:0,51,538	0/0:21,0:21:45.13:0,45,510	0/0:28,0:23:62.94:0,63,652	0/0:34,0:31:63.28:0,63,853	0/0:29,0:25:54.06:0,54,573	0/0:14,0:13:27.08:0,27,306
chr10	100351467	.	G	GA	259.97	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=3.664;DP=674;FS=0.000;HRun=5;HaplotypeScore=61.8655;InbreedingCoeff=0.9647;MQ=50.74;MQ0=42;MQRankSum=-4.537;QD=12.38;ReadPosRankSum=0.646;VQSLOD=1.4716;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:16:27.09:353,27,0	0/0:6,0:6:12.03:0,12,129	./.	./.	0/0:24,0:23:51.04:0,51,526	0/0:27,0:26:60.15:0,60,643	0/0:17,0:15:26.98:0,27,267	0/0:36,0:11:33.02:0,33,332	0/0:36,1:31:72.18:0,72,773	0/0:25,0:24:60.15:0,60,644	0/0:26,0:25:57.02:0,57,603	0/0:23,0:22:54.11:0,54,564	0/0:36,0:35:87.20:0,87,924	0/0:34,0:32:72.17:0,72,766	0/0:32,0:28:57.14:0,57,612	0/0:24,0:22:51.07:0,51,539	0/0:21,0:19:33.02:0,33,430	0/0:27,0:23:43.84:0,44,438	0/0:19,0:9:24.05:0,24,251	0/0:32,0:29:65.53:0,66,696	0/0:32,0:28:66.16:0,66,707	0/0:26,0:22:39.08:0,39,410	0/0:21,0:19:41.13:0,41,422	0/0:22,0:22:48.11:0,48,508	0/0:29,0:24:60.11:0,60,625	0/0:33,0:30:79.16:0,79,859	0/0:27,0:23:54.10:0,54,563	0/0:11,0:10:27.07:0,27,290
chr10	100352607	.	AAC	A	614.66	PASS	AB=0.937;AC=23;AF=0.479;AN=48;BaseQRankSum=2.389;DP=366;FS=6.098;HRun=0;HaplotypeScore=58.6000;InbreedingCoeff=0.1032;MQ=74.39;MQ0=11;MQRankSum=3.966;QD=3.12;ReadPosRankSum=0.270;VQSLOD=0.5005;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:0.47:0,0,1	1/1:3,3:7:8.86:79,9,0	./.	0/0:27,0:19:0.47:0,0,1	0/1:16,1:17:26.06:83,0,26	0/1:19,0:19:16.22:16,0,120	0/0:14,0:13:6:0,6,65	0/1:21,0:20:22.35:22,0,37	0/0:5,0:5:8.75:0,9,66	1/1:7,0:6:10.77:58,11,0	./.	1/1:8,1:14:5.85:47,6,0	0/1:10,1:11:13.93:27,0,14	1/1:6,1:7:3.01:33,3,0	./.	0/1:13,1:13:17.03:28,0,17	1/1:10,0:9:0.47:1,0,0	0/0:8,0:8:6.02:0,6,78	0/0:9,0:8:0.82:0,1,23	0/0:17,0:17:7.96:0,8,130	0/1:17,0:17:10.69:11,0,141	1/1:7,4:11:3.01:33,3,0	./.	1/1:13,1:13:9.02:95,9,0	1/1:14,0:13:14.03:115,14,0	0/1:9,4:13:70.70:112,0,71	0/0:10,0:10:5.87:0,6,39	0/0:14,0:13:1.86:0,2,70
chr10	100352654	.	ACG	A	176.52	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=7.122;DP=430;FS=36.397;HRun=0;HaplotypeScore=57.8371;InbreedingCoeff=-0.0752;MQ=51.24;MQ0=30;MQRankSum=2.120;QD=1.12;ReadPosRankSum=-1.847;VQSLOD=-0.0815;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:19:5.98:47,6,0	0/0:10,0:10:20.40:0,20,240	0/0:5,0:1:1.55:0,2,4	0/0:5,0:2:5.60:0,6,39	0/0:14,0:14:14.11:0,14,385	0/1:23,0:22:85.94:86,0,389	0/0:13,0:11:8.53:0,9,157	0/0:21,0:17:25.58:0,26,467	0/1:11,0:10:44.08:44,0,203	0/1:14,0:12:53.79:54,0,302	0/0:10,4:13:20.80:0,21,294	0/0:21,0:20:23.56:0,24,582	0/0:10,0:10:20.39:0,20,337	0/0:9,1:10:9.45:0,9,319	0/0:13,0:12:26.99:0,27,479	0/0:16,0:14:2.32:0,2,329	0/0:19,0:18:10.29:0,10,635	0/1:11,0:11:13.37:13,0,266	0/0:19,0:18:32.37:0,32,542	0/1:16,0:15:7.58:8,0,409	0/0:30,0:25:18.81:0,19,690	0/0:20,0:18:36.07:0,36,585	0/0:11,0:10:8.90:0,9,155	0/1:26,0:24:3.17:3,0,301	0/1:14,0:13:32.94:33,0,218	0/0:22,0:20:3.71:0,4,487	0/1:10,0:9:15.55:16,0,216	0/1:9,0:7:12.18:12,0,130
chr10	100352981	.	CA	C	479.44	PASS	AB=0.918;AC=4;AF=0.071;AN=56;BaseQRankSum=5.973;DP=329;FS=9.808;HRun=11;HaplotypeScore=33.9199;InbreedingCoeff=0.3986;MQ=76.65;MQ0=0;MQRankSum=-0.661;QD=7.99;ReadPosRankSum=0.779;VQSLOD=0.5106;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:65.92:542,66,0	0/0:7,0:7:18.05:0,18,192	0/1:15,1:16:40.28:40,0,76	0/0:7,0:6:3:0,3,26	0/0:14,0:14:42.10:0,42,446	0/0:9,0:9:20.08:0,20,197	0/0:13,1:14:14.47:0,14,359	0/1:15,2:17:10.10:10,0,313	0/0:9,0:9:18.05:0,18,192	0/0:12,0:12:33.08:0,33,352	0/0:11,0:11:30.08:0,30,320	0/0:8,0:8:21.03:0,21,211	0/0:11,0:11:27.05:0,27,277	0/0:12,0:15:32.82:0,33,317	0/0:9,0:9:24.06:0,24,256	0/0:7,0:7:18.05:0,18,192	0/0:9,0:9:21.02:0,21,212	0/0:11,0:11:24.06:0,24,256	0/0:12,1:13:14.43:0,14,347	0/0:10,0:10:27.07:0,27,288	0/0:4,0:5:11.86:0,12,110	0/0:14,0:15:35.92:0,36,366	0/0:17,0:17:39.08:0,39,407	0/0:8,0:8:21.05:0,21,224	0/0:8,0:8:21.05:0,21,223	0/0:20,0:20:54.13:0,54,569	0/0:11,0:11:30.08:0,30,320	0/0:8,0:9:23.89:0,24,238
chr10	100355030	.	G	GC	1106.36	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.704;DP=564;FS=0.000;HRun=5;HaplotypeScore=59.7121;InbreedingCoeff=0.9338;MQ=83.81;MQ0=0;MQRankSum=-2.403;QD=31.61;ReadPosRankSum=0.688;VQSLOD=4.1267;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:93.23:1201,93,0	0/0:13,0:13:36.05:0,36,368	0/0:19,0:19:8.13:0,8,412	0/0:20,0:20:46.08:0,46,482	0/0:22,0:22:66.17:0,66,709	0/0:19,0:19:54.14:0,54,580	0/0:15,0:15:39.08:0,39,410	0/0:17,0:17:48.10:0,48,502	0/0:17,0:17:51.13:0,51,547	0/0:26,0:26:66.15:0,66,698	0/0:23,0:23:60.15:0,60,645	0/0:16,0:16:45.11:0,45,484	0/0:16,0:16:48.12:0,48,515	0/0:18,0:18:54.12:0,54,570	0/0:28,0:28:72.07:0,72,757	0/0:16,0:16:48.12:0,48,516	0/0:25,0:24:63.13:0,63,665	0/0:23,0:23:69.11:0,69,712	0/0:15,0:15:39.10:0,39,418	0/0:24,0:24:66.17:0,66,708	0/0:24,0:24:63.16:0,63,676	0/0:17,0:17:48.12:0,48,515	0/0:17,0:17:51.13:0,51,547	0/0:25,0:25:60.12:0,60,628	0/0:24,0:24:66.16:0,66,709	0/0:19,0:19:50.33:0,50,516	0/0:21,0:21:60.15:0,60,644	0/0:9,0:9:27.07:0,27,290
chr10	100355112	.	AAC	A	338.80	PASS	AB=0.913;AC=13;AF=0.250;AN=52;BaseQRankSum=1.405;DP=500;FS=18.347;HRun=0;HaplotypeScore=90.0079;InbreedingCoeff=-0.2340;MQ=60.63;MQ0=18;MQRankSum=2.133;QD=1.70;ReadPosRankSum=2.544;VQSLOD=-0.1461;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,3:33:54.61:120,0,55	0/1:4,2:6:53:53,0,74	./.	./.	0/0:12,0:11:7.72:0,8,136	0/0:9,0:16:2.68:0,3,11	0/0:14,0:14:7.34:0,7,86	0/0:14,0:13:5.90:0,6,37	0/1:20,0:20:7.96:8,0,62	0/0:20,0:20:14.92:0,15,158	1/1:6,1:7:3.01:33,3,0	0/0:12,0:12:15.04:0,15,220	0/1:7,2:9:23.51:24,0,58	0/1:10,1:11:77.17:77,0,85	0/1:17,1:18:45.02:45,0,158	0/0:14,0:14:10.24:0,10,89	0/0:33,0:33:25.83:0,26,457	0/0:13,0:13:8.74:0,9,71	0/1:14,0:20:10.29:10,0,92	0/0:19,0:18:1.96:0,2,142	0/0:41,0:40:25.88:0,26,203	0/1:15,1:16:23.58:24,0,69	0/1:14,1:14:8.80:9,0,166	0/1:31,1:32:51.15:51,0,372	0/1:9,1:10:26.50:27,0,39	0/0:12,0:12:13.84:0,14,108	0/0:15,0:15:9.35:0,9,77	0/0:6,0:7:10.73:0,11,72
chr10	100355703	.	C	CA	1568.55	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=10.018;DP=733;FS=3.931;HRun=1;HaplotypeScore=76.0595;InbreedingCoeff=0.9920;MQ=89.24;MQ0=0;MQRankSum=-4.098;QD=37.35;ReadPosRankSum=-1.035;VQSLOD=3.6800;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:42:99:1663,111,0	0/0:15,0:15:45.15:0,45,584	0/0:25,0:25:60.15:0,60,794	0/0:28,0:28:75.17:0,75,943	0/0:26,0:26:72.18:0,72,901	0/0:23,0:23:69.21:0,69,882	0/0:23,0:23:69.18:0,69,852	0/0:31,0:31:84.25:0,84,1065	0/0:26,0:26:78.24:0,78,999	0/0:28,0:28:84.26:0,84,1079	0/0:31,0:31:93.30:0,93,1206	0/0:18,0:18:54.14:0,54,660	0/0:27,0:27:78.25:0,78,1012	0/0:36,0:36:99:0,99,1255	0/0:27,0:27:75.24:0,75,974	0/0:34,0:33:99:0,102,1297	0/0:18,0:18:54.15:0,54,685	0/0:14,0:14:39.13:0,39,506	0/0:19,0:19:57.17:0,57,725	0/0:37,0:37:99:0,111,1426	0/0:20,0:20:60.18:0,60,762	0/0:24,0:24:69.22:0,69,884	0/0:31,0:31:90.29:0,90,1169	0/0:26,0:26:78.25:0,78,1011	0/0:32,0:32:96.31:0,96,1246	0/0:33,0:33:99:0,99,1274	0/0:33,0:33:99:0,99,1285	0/0:6,0:6:18.06:0,18,234
chr10	100356127	.	A	AG	898.09	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.096;DP=595;FS=0.795;HRun=2;HaplotypeScore=58.5984;InbreedingCoeff=0.9973;MQ=85.50;MQ0=0;MQRankSum=-3.617;QD=29.94;ReadPosRankSum=0.252;VQSLOD=3.1529;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:69.23:993,69,0	0/0:12,0:12:36.11:0,36,446	0/0:18,0:18:44.94:0,45,484	0/0:24,0:23:64.68:0,65,746	0/0:21,0:21:60.10:0,60,699	0/0:20,0:20:60.18:0,60,731	0/0:20,0:20:57.15:0,57,680	0/0:24,0:24:66.20:0,66,809	0/0:18,0:18:54.14:0,54,644	0/0:30,0:30:90.28:0,90,1116	0/0:24,0:24:72.23:0,72,892	0/0:21,0:21:63.20:0,63,781	0/0:17,0:17:48.15:0,48,595	0/0:28,0:28:78.23:0,78,954	0/0:25,0:25:75.22:0,75,906	0/0:13,0:13:39.10:0,39,459	0/0:10,0:10:27.07:0,27,321	0/0:20,0:20:57.18:0,57,705	0/0:14,0:14:36.10:0,36,436	0/0:40,0:40:99:0,111,1376	0/0:11,0:11:33.10:0,33,398	0/0:20,0:20:54.17:0,54,669	0/0:20,0:20:57.13:0,57,669	0/0:17,0:17:48.15:0,48,595	0/0:22,0:22:63.19:0,63,771	0/0:24,0:24:69.21:0,69,846	0/0:43,0:43:99:0,129,1586	0/0:9,0:9:27.01:0,27,279
chr10	100356986	.	G	GAGAT	5024.17	PASS	AB=1.000;AC=21;AF=0.404;AN=52;BaseQRankSum=-10.989;DP=685;FS=0.501;HRun=0;HaplotypeScore=113.0546;InbreedingCoeff=0.9421;MQ=64.00;MQ0=7;MQRankSum=-0.107;QD=19.86;ReadPosRankSum=1.847;VQSLOD=4.7467;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:31:21.50:0,21,197	0/0:15,0:15:21.06:0,21,299	./.	./.	0/0:37,0:36:60.13:0,60,840	1/1:10,8:18:18.06:419,18,0	1/1:17,0:18:5.99:50,6,0	0/1:35,0:35:0:0,0,0	1/1:16,12:28:18.06:419,18,0	0/0:30,0:30:23.38:0,23,243	0/0:25,0:26:33.11:0,33,487	0/0:23,0:23:27.08:0,27,391	0/0:20,0:20:30.08:0,30,416	0/0:22,0:22:30.09:0,30,436	0/0:35,0:35:48.12:0,48,668	1/1:12,9:22:24.08:559,24,0	0/0:15,0:24:17.69:0,18,163	1/1:10,4:16:10.93:111,11,0	1/1:12,6:17:18.05:355,18,0	0/0:34,0:34:45.12:0,45,640	1/1:5,13:20:24.08:559,24,0	0/0:20,0:21:33.06:0,33,429	0/0:17,0:18:24.07:0,24,341	0/0:22,0:21:20.72:0,21,274	0/0:25,0:26:45.12:0,45,645	1/1:12,15:28:48.09:875,48,0	1/1:22,12:36:33:767,33,0	1/1:0,13:14:39.13:909,39,0
chr10	100357333	.	AAGACAGAC	A	8019.68	PASS	AB=0.833;AC=23;AF=0.442;AN=52;BaseQRankSum=14.168;DP=769;FS=12.092;HRun=0;HaplotypeScore=185.9197;InbreedingCoeff=0.8667;MQ=54.09;MQ0=14;MQRankSum=-11.393;QD=25.62;ReadPosRankSum=-1.521;VQSLOD=3.5156;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,22:48:42.01:888,42,0	0/0:15,0:15:24.05:0,24,737	./.	0/0:38,0:23:6.02:0,6,201	0/0:24,0:24:36.09:0,36,1158	1/1:6,12:18:30.10:753,30,0	1/1:14,9:22:15.05:376,15,0	./.	1/1:12,20:32:39.13:941,39,0	0/0:39,0:39:75.08:0,75,2754	0/0:25,0:25:39.13:0,39,1524	0/0:33,0:34:57.18:0,57,2073	0/0:28,0:28:54.16:0,54,2030	0/0:27,0:27:45.14:0,45,1606	0/0:29,0:29:57.15:0,57,1985	1/1:13,11:24:24.08:603,24,0	0/0:34,0:34:66.70:0,67,2582	0/1:12,3:15:99:155,0,148	1/1:18,7:22:17.96:362,18,0	1/1:12,23:35:72.01:1473,72,0	1/1:13,4:17:3.01:75,3,0	0/0:28,0:28:51.16:0,51,1745	0/0:25,0:25:30.10:0,30,1181	0/0:40,0:40:69.22:0,69,2726	0/0:16,0:16:24.08:0,24,987	1/1:17,17:34:48.16:1189,48,0	1/1:16,20:35:39.05:978,39,0	1/1:1,4:5:9.03:226,9,0
chr10	100358652	.	GGT	G	377.19	PASS	AB=0.926;AC=18;AF=0.360;AN=50;BaseQRankSum=4.025;DP=533;FS=3.648;HRun=0;HaplotypeScore=70.8873;InbreedingCoeff=0.2277;MQ=65.18;MQ0=11;MQRankSum=0.421;QD=1.36;ReadPosRankSum=2.490;VQSLOD=1.4447;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:28:5.52:25,6,0	0/0:2,0:2:3.01:0,3,44	./.	0/1:33,0:18:0:0,0,0	0/0:15,0:14:3.01:0,3,41	0/1:14,3:17:60.35:60,0,92	1/1:24,1:25:5.68:45,6,0	0/0:27,0:25:0.89:0,1,2	1/1:22,2:24:2.75:32,3,0	0/0:10,0:10:3:0,3,29	0/0:13,0:13:3.01:0,3,42	0/1:16,1:17:16.84:17,0,149	./.	./.	0/0:17,0:17:3.01:0,3,42	1/1:14,4:18:9.02:96,9,0	0/1:18,0:18:18.44:18,0,96	0/1:15,7:20:4.19:112,0,4	0/0:8,0:8:2.98:0,3,21	1/1:7,1:8:3.01:32,3,0	0/1:42,0:42:4.70:5,0,266	0/0:22,0:21:18.50:0,19,221	0/0:19,0:19:9.03:0,9,132	0/0:20,0:20:15.05:0,15,215	0/0:14,0:14:3.01:0,3,42	0/0:20,0:20:6.02:0,6,87	1/1:23,0:24:8.85:78,9,0	0/0:12,0:11:6.02:0,6,88
chr10	100359255	.	A	AT	617.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.094;DP=415;FS=0.916;HRun=4;HaplotypeScore=48.1926;InbreedingCoeff=0.7975;MQ=79.38;MQ0=1;MQRankSum=-3.928;QD=29.38;ReadPosRankSum=-0.566;VQSLOD=2.9187;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:21:54.10:712,54,0	0/0:3,0:3:9.03:0,9,111	0/0:21,0:13:38.25:0,38,323	0/0:21,1:16:12.04:0,12,98	0/0:18,0:18:51.13:0,51,596	0/0:16,0:16:45.11:0,45,531	0/0:7,0:7:21:0,21,231	0/0:37,0:37:99:0,99,1181	0/0:10,0:10:30.08:0,30,358	0/0:15,0:15:45.12:0,45,536	0/0:17,0:17:51.13:0,51,598	0/0:8,0:8:21.04:0,21,235	0/0:7,0:7:21.06:0,21,250	0/0:17,0:17:51.13:0,51,599	0/0:13,0:13:39.11:0,39,471	0/0:18,0:18:54.06:0,54,616	0/0:23,0:23:69.08:0,69,808	0/0:17,0:17:48.10:0,48,564	0/0:25,0:25:67.73:0,68,773	0/0:20,0:20:48.12:0,48,560	0/0:4,0:4:12.04:0,12,149	0/0:4,0:4:6:0,6,55	0/0:9,0:9:27.07:0,27,314	0/0:6,0:6:18.06:0,18,223	0/0:12,0:12:36.11:0,36,446	0/0:19,0:19:57.15:0,57,674	0/0:16,0:16:48.11:0,48,557	0/0:8,0:8:21.03:0,21,233
chr10	100359266	.	A	AT	421.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.416;DP=404;FS=0.000;HRun=8;HaplotypeScore=47.3624;InbreedingCoeff=0.6850;MQ=74.90;MQ0=1;MQRankSum=-4.051;QD=18.31;ReadPosRankSum=-0.195;VQSLOD=2.9875;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:23:45.13:516,45,0	0/0:4,0:4:6:0,6,55	0/0:17,0:10:14.54:0,15,119	0/0:23,0:15:8.63:0,9,52	0/0:15,0:15:33:0,33,302	0/0:16,0:16:45.02:0,45,411	0/0:6,0:6:18.01:0,18,165	0/0:36,0:36:87.02:0,87,789	0/0:9,0:9:21.01:0,21,192	0/0:16,0:16:42.02:0,42,384	0/0:16,0:16:39.01:0,39,357	0/0:10,0:10:30.02:0,30,274	0/0:6,0:6:12.01:0,12,110	0/0:13,0:13:36.02:0,36,329	0/0:15,0:15:45.02:0,45,412	0/0:15,0:16:41.06:0,41,363	0/0:22,0:22:62.98:0,63,564	0/0:17,0:17:45.02:0,45,412	0/0:22,0:22:63.03:0,63,576	0/0:19,0:19:57.01:0,57,514	0/0:6,0:6:12:0,12,110	0/0:1,0:1:3:0,3,27	0/0:10,0:10:30.02:0,30,275	0/0:6,0:6:18.01:0,18,165	0/0:13,0:13:33.01:0,33,302	0/0:23,0:23:60.01:0,60,541	0/0:15,0:15:36:0,36,325	0/0:8,0:8:24.01:0,24,219
chr10	100359575	.	A	AT	5127.94	PASS	AB=0.615;AC=23;AF=0.411;AN=56;BaseQRankSum=-12.738;DP=594;FS=7.552;HRun=9;HaplotypeScore=66.2805;InbreedingCoeff=0.9277;MQ=84.62;MQ0=0;MQRankSum=-1.616;QD=23.85;ReadPosRankSum=-2.058;VQSLOD=4.8932;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,153,1328	0/0:12,0:12:23.98:0,24,208	0/0:25,0:22:18.13:0,18,196	0/0:17,0:18:8.53:0,9,151	0/0:20,0:20:50.98:0,51,443	1/1:4,17:21:45.12:498,45,0	1/1:4,16:20:48.13:531,48,0	1/1:3,14:17:13.01:352,13,0	1/1:3,15:20:18.56:400,19,0	0/0:31,0:31:77.95:0,78,672	0/0:22,0:22:50.98:0,51,443	0/0:23,0:23:59.98:0,60,521	0/0:24,0:24:62.97:0,63,547	0/0:16,0:16:47.99:0,48,417	0/0:8,0:9:20.03:0,20,162	1/1:1,10:11:27.07:299,27,0	0/0:36,0:36:89.96:0,90,781	1/1:5,17:22:45.95:611,46,0	1/1:6,11:18:35.91:365,36,0	1/1:4,12:17:32.88:333,33,0	1/1:1,14:15:36.10:398,36,0	0/0:17,0:17:47.96:0,48,412	0/0:15,0:15:41.99:0,42,364	0/0:35,0:35:86.97:0,87,755	0/0:17,0:17:50.99:0,51,443	1/1:2,19:22:36.95:619,37,0	1/1:5,19:24:51.14:564,51,0	0/1:3,4:8:5.17:158,0,5
chr10	100359951	.	AT	A	823.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.324;DP=557;FS=9.407;HRun=5;HaplotypeScore=51.1380;InbreedingCoeff=0.9899;MQ=75.74;MQ0=0;MQRankSum=-2.196;QD=26.57;ReadPosRankSum=1.409;VQSLOD=2.9862;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:31:81.23:919,81,0	0/0:9,0:9:24.08:0,24,328	0/0:8,0:8:24.06:0,24,301	0/0:12,0:12:23.24:0,23,245	0/0:22,0:22:66.22:0,66,897	0/0:24,0:24:66.22:0,66,903	0/0:11,0:11:30.10:0,30,410	0/0:30,0:30:78.24:0,78,1038	0/0:20,0:20:54.18:0,54,738	0/0:24,0:24:66.21:0,66,890	0/0:25,0:25:72.23:0,72,966	0/0:15,0:15:45.15:0,45,613	0/0:22,0:22:63.21:0,63,861	0/0:21,0:21:60.19:0,60,805	0/0:16,0:16:45.14:0,45,602	0/0:26,0:26:78.25:0,78,1053	0/0:21,0:21:60.20:0,60,821	0/0:19,0:19:51.17:0,51,698	0/0:14,0:14:39.13:0,39,533	0/0:24,0:24:69.22:0,69,929	0/0:9,0:9:27.09:0,27,369	0/0:25,0:25:75.25:0,75,1026	0/0:18,0:18:48.16:0,48,656	0/0:21,0:20:57.19:0,57,779	0/0:21,0:21:63.20:0,63,847	0/0:31,0:31:93.31:0,93,1267	0/0:29,0:29:81.27:0,81,1106	0/0:9,0:9:24.06:0,24,308
chr10	100361867	.	A	AT	1301.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-9.247;DP=641;FS=3.024;HRun=6;HaplotypeScore=58.7568;InbreedingCoeff=0.9928;MQ=86.20;MQ0=0;MQRankSum=-5.088;QD=30.27;ReadPosRankSum=1.123;VQSLOD=4.3825;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,40:43:99:1396,111,0	0/0:8,0:8:24.05:0,24,245	0/0:23,0:23:51.11:0,51,515	0/0:20,0:20:51.10:0,51,514	0/0:33,0:33:96.22:0,96,979	0/0:28,0:28:75.14:0,75,757	0/0:14,0:14:42.10:0,42,429	0/0:25,0:25:51.08:0,51,510	0/0:22,0:22:60.12:0,60,605	0/0:27,0:27:72.15:0,72,730	0/0:24,0:24:66.12:0,66,663	0/0:14,0:14:39.09:0,39,398	0/0:18,0:18:48.10:0,48,490	0/0:20,0:20:60.14:0,60,612	0/0:27,0:27:81.18:0,81,826	0/0:20,0:20:57.11:0,57,574	0/0:22,0:22:63.09:0,63,625	0/0:22,0:22:63.11:0,63,631	0/0:25,0:25:66.13:0,66,666	0/0:34,0:34:90.18:0,90,912	0/0:10,0:10:27.06:0,27,275	0/0:26,0:26:75.15:0,75,756	0/0:17,0:17:48.11:0,48,490	0/0:25,0:25:72.16:0,72,735	0/0:24,0:24:69.15:0,69,704	0/0:31,0:31:81.16:0,81,819	0/0:24,0:24:69.15:0,69,704	0/0:15,0:15:21.04:0,21,214
chr10	100362877	.	T	TAGTATACC	2113.63	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.489;DP=710;FS=0.000;HRun=0;HaplotypeScore=171.7960;InbreedingCoeff=0.9985;MQ=84.76;MQ0=0;MQRankSum=-7.168;QD=64.05;ReadPosRankSum=-0.464;VQSLOD=3.3894;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,19:33:54.14:2209,54,0	0/0:20,0:20:48.16:0,48,1266	0/0:24,0:24:59.94:0,60,1469	0/0:21,0:21:40.38:0,40,911	0/0:29,0:29:78.23:0,78,1950	0/0:23,0:23:69.24:0,69,1825	0/0:15,0:15:45.14:0,45,1134	0/0:28,0:28:78.27:0,78,2043	0/0:29,0:29:81.28:0,81,2161	0/0:40,0:40:99:0,102,2736	0/0:28,0:28:75.24:0,75,1892	0/0:22,0:22:60.21:0,60,1577	0/0:31,0:31:87.30:0,87,2342	0/0:30,0:30:78.27:0,78,2057	0/0:38,0:38:99:0,99,2565	0/0:24,0:24:69.24:0,69,1851	0/0:25,0:25:69.24:0,69,1767	0/0:9,0:9:27.09:0,27,691	0/0:16,0:16:33.11:0,33,875	0/0:35,0:35:93.28:0,93,2397	0/0:24,0:24:63.22:0,63,1708	0/0:21,0:21:60.21:0,60,1601	0/0:30,0:30:75.24:0,75,1969	0/0:15,0:15:42.14:0,42,1065	0/0:24,0:23:63.22:0,63,1707	0/0:32,0:32:90.30:0,90,2335	0/0:32,0:31:84.29:0,84,2248	0/0:12,0:12:36.12:0,36,918
chr10	100364560	.	CAA	C	4030.09	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=6.807;DP=507;FS=6.968;HRun=12;HaplotypeScore=71.6304;InbreedingCoeff=0.8743;MQ=83.57;MQ0=0;MQRankSum=-2.800;QD=17.60;ReadPosRankSum=4.749;VQSLOD=2.5937;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,8:11:18.03:183,18,0	0/0:7,0:7:18.06:0,18,268	0/0:23,0:22:25.30:0,25,251	0/1:22,0:20:14.30:14,0,128	0/0:30,0:34:79.67:0,80,988	1/1:6,14:23:25.99:360,26,0	1/1:4,14:19:32.78:388,33,0	1/1:5,15:21:44.80:439,45,0	1/1:2,10:12:24.04:242,24,0	0/0:18,0:20:50.60:0,51,588	0/0:17,0:17:39.09:0,39,508	0/0:15,0:15:39.12:0,39,552	0/0:17,0:17:42.07:0,42,563	0/0:9,0:9:25.31:0,25,341	0/0:20,0:22:53.59:0,54,650	1/1:3,6:9:18.03:183,18,0	0/0:23,2:25:2.13:0,2,712	1/1:0,10:10:27.06:275,27,0	1/1:4,8:12:24.01:238,24,0	1/1:4,22:28:56.52:613,57,0	1/1:3,10:13:24.03:244,24,0	0/0:13,0:15:32.57:0,33,403	0/0:22,1:26:20:0,20,681	0/0:26,0:26:75.19:0,75,1002	0/0:18,0:21:56.10:0,56,685	1/1:4,13:20:35.24:381,35,0	1/1:5,19:25:44.81:439,45,0	1/1:0,3:3:3.01:31,3,0
chr10	100364621	.	CCAA	C	484.64	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.287;DP=552;FS=0.000;HRun=0;HaplotypeScore=84.4282;InbreedingCoeff=0.9846;MQ=74.59;MQ0=1;MQRankSum=-1.592;QD=37.28;ReadPosRankSum=2.720;VQSLOD=4.5009;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:33.11:579,33,0	0/0:8,0:8:24.07:0,24,458	0/0:21,0:20:51.61:0,52,942	0/0:12,0:10:20.86:0,21,372	0/0:36,0:36:99:0,105,2407	0/0:19,0:19:57.20:0,57,1365	0/0:19,0:19:54.18:0,54,1203	0/0:19,0:19:57.19:0,57,1258	0/0:17,0:17:42.13:0,42,905	0/0:24,0:24:72.24:0,72,1587	0/0:24,0:24:72.23:0,72,1564	0/0:20,0:20:60.21:0,60,1396	0/0:16,0:16:48.15:0,48,1081	0/0:9,0:9:27.08:0,27,578	0/0:16,0:16:48.15:0,48,1025	0/0:18,0:18:51.15:0,51,1053	0/0:26,0:26:78.25:0,78,1755	0/0:14,0:14:39.13:0,39,934	0/0:17,0:17:51.17:0,51,1157	0/0:43,0:43:99:0,129,2860	0/0:16,0:16:45.14:0,45,986	0/0:19,0:19:54.19:0,54,1245	0/0:20,0:20:60.19:0,60,1368	0/0:27,0:27:81.22:0,81,1726	0/0:25,0:25:69.24:0,69,1605	0/0:24,0:24:72.20:0,72,1606	0/0:22,0:22:63.02:0,63,1404	0/0:8,0:8:18.06:0,18,431
chr10	100367129	.	T	TG	134.20	PASS	AB=0.806;AC=2;AF=0.036;AN=56;BaseQRankSum=4.019;DP=352;FS=1.404;HRun=8;HaplotypeScore=51.9231;InbreedingCoeff=0.1828;MQ=66.43;MQ0=0;MQRankSum=-1.471;QD=7.06;ReadPosRankSum=-0.767;VQSLOD=0.2109;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:4,7:11:3.35:202,0,3	0/0:4,0:4:6:0,6,55	0/0:9,0:7:13.23:0,13,87	0/1:8,0:7:19.83:20,0,45	0/0:12,0:12:26.99:0,27,243	0/0:14,0:14:33:0,33,302	0/0:14,0:14:30.01:0,30,275	0/0:12,0:12:17.98:0,18,161	0/0:16,0:16:29.99:0,30,274	0/0:10,0:10:26.99:0,27,243	0/0:15,0:15:26.98:0,27,242	0/0:17,0:17:26.96:0,27,243	0/0:12,0:12:23.99:0,24,215	0/0:20,0:20:32.97:0,33,302	0/0:17,0:17:26.96:0,27,247	0/0:8,0:8:15:0,15,137	0/0:15,0:15:33:0,33,302	0/0:8,0:8:23.97:0,24,209	0/0:8,0:8:24.01:0,24,218	0/0:13,0:13:20.96:0,21,185	0/0:11,0:11:27.01:0,27,247	0/0:8,0:8:11.99:0,12,109	0/0:13,0:13:17.98:0,18,164	0/0:20,0:20:35.99:0,36,329	0/0:17,0:17:36.01:0,36,328	0/0:15,0:15:36.01:0,36,329	0/0:20,0:20:35.78:0,36,314	0/0:4,0:4:8.99:0,9,79
chr10	100367198	.	GAAAAATA	G	274.30	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.424;DP=432;FS=3.885;HRun=0;HaplotypeScore=105.6063;InbreedingCoeff=0.8284;MQ=73.51;MQ0=1;MQRankSum=-2.356;QD=39.19;ReadPosRankSum=0.101;VQSLOD=3.3974;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,6:7:15.05:363,15,0	0/0:5,0:5:12:0,12,330	0/0:22,0:19:38.45:0,38,780	0/0:26,0:17:8.85:0,9,133	0/0:19,0:19:51.16:0,51,1616	0/0:11,0:11:27.09:0,27,1005	0/0:17,0:17:51.13:0,51,1709	0/0:16,0:16:39.13:0,39,1355	0/0:20,0:20:54.19:0,54,2025	0/0:17,0:17:45.15:0,45,1653	0/0:17,0:17:45.14:0,45,1609	0/0:13,0:13:39.13:0,39,1369	0/0:16,0:16:45.15:0,45,1612	0/0:15,0:15:42.11:0,42,1465	0/0:16,0:16:45.15:0,45,1694	0/0:11,0:11:27.06:0,27,894	0/0:13,0:13:33.11:0,33,1224	0/0:6,0:6:12:0,12,366	0/0:4,0:4:9.03:0,9,284	0/0:18,0:18:54.19:0,54,1985	0/0:13,0:13:33.11:0,33,1141	0/0:17,0:17:36.12:0,36,1359	0/0:11,0:11:33.11:0,33,1183	0/0:18,0:18:51.18:0,51,1927	0/0:22,0:22:54.15:0,54,1937	0/0:17,0:17:51.18:0,51,1848	0/0:25,0:25:66.23:0,66,2280	0/0:18,0:18:51.18:0,51,1901
chr10	100367297	.	G	GTCC	6968.64	PASS	AB=0.894;AC=54;AF=0.964;AN=56;BaseQRankSum=-3.104;DP=284;FS=7.092;HRun=0;HaplotypeScore=137.2538;InbreedingCoeff=-0.0540;MQ=62.82;MQ0=0;MQRankSum=-4.455;QD=24.54;ReadPosRankSum=1.840;VQSLOD=4.3369;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:26.96:231,27,0	1/1:0,5:5:14.99:136,15,0	0/1:7,1:8:35.53:57,0,36	0/1:8,0:9:38.18:45,0,38	1/1:4,14:18:35.79:293,36,0	1/1:2,14:16:45.01:436,45,0	1/1:0,9:9:26.98:236,27,0	1/1:5,14:19:51.10:601,51,0	1/1:1,15:16:44.93:383,45,0	1/1:1,5:6:18.05:254,18,0	1/1:0,13:13:32.28:235,32,0	1/1:3,10:13:35.97:334,36,0	1/1:0,10:10:30:272,30,0	1/1:1,17:19:56.15:467,56,0	1/1:1,7:8:23.98:247,24,0	1/1:1,6:7:21.01:192,21,0	1/1:3,5:7:15.03:180,15,0	1/1:1,0:1:3.01:64,3,0	1/1:2,1:3:9.03:146,9,0	1/1:0,16:16:47.81:406,48,0	1/1:1,4:5:9:83,9,0	1/1:1,6:7:11.41:115,11,0	1/1:0,6:6:14.97:127,15,0	1/1:0,5:5:8.91:62,9,0	1/1:0,10:10:29.96:255,30,0	1/1:0,8:8:24.07:311,24,0	1/1:2,15:17:50.83:491,51,0	1/1:5,7:12:35.16:310,35,0
chr10	100369430	.	G	GTGTA	191.64	PASS	AB=0.951;AC=3;AF=0.058;AN=52;BaseQRankSum=3.734;DP=1120;FS=18.149;HRun=0;HaplotypeScore=245.7346;InbreedingCoeff=0.1999;MQ=47.40;MQ0=29;MQRankSum=-3.772;QD=2.00;ReadPosRankSum=-0.623;VQSLOD=1.1187;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:2.22:0,2,103	0/0:17,1:18:38.74:0,39,588	./.	./.	0/0:34,1:34:23.24:0,23,465	0/0:35,0:31:6.87:0,7,50	0/0:66,0:62:62.27:0,62,1073	0/0:49,0:29:67.94:0,68,1019	0/0:57,0:55:2.30:0,2,33	0/1:55,3:53:99:265,0,1693	0/0:29,1:30:35.68:0,36,706	0/0:44,0:44:14.89:0,15,135	0/0:38,0:35:9.60:0,10,85	0/0:51,0:50:6.72:0,7,51	0/0:51,0:47:2.06:0,2,23	0/0:49,0:49:7.77:0,8,99	0/0:54,0:54:99:0,126,2181	0/0:30,0:30:87.23:0,87,1530	0/0:20,0:11:33.10:0,33,590	0/0:28,1:29:43.87:0,44,768	0/0:124,0:121:23.02:0,23,217	1/1:38,0:35:0.44:3,0,0	0/0:29,0:26:23.83:0,24,468	0/0:54,1:54:11.97:0,12,132	0/0:39,0:38:0.33:0,0,1	0/0:54,1:50:45.26:0,45,1952	0/0:23,0:20:49.35:0,49,738	0/0:16,0:12:8.96:0,9,130
chr10	100369439	.	TA	T	6444.68	PASS	AB=0.530;AC=45;AF=0.865;AN=52;BaseQRankSum=3.074;DP=1095;FS=7.174;HRun=1;HaplotypeScore=192.8494;InbreedingCoeff=0.2236;MQ=48.15;MQ0=23;MQRankSum=-0.021;QD=6.42;ReadPosRankSum=3.027;VQSLOD=1.8907;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,2:15:5.43:48,5,0	1/1:17,0:17:32.30:253,32,0	./.	./.	1/1:30,4:33:27.49:220,27,0	0/0:6,27:30:0:0,0,0	1/1:58,0:55:54.85:346,55,0	1/1:39,0:26:19.42:369,19,0	1/1:1,57:57:5.59:74,6,0	1/1:47,5:49:99:863,128,0	1/1:27,2:29:39.16:262,39,0	0/0:1,42:43:2.32:0,2,24	1/1:5,39:41:8.70:107,9,0	1/1:1,51:51:2.59:37,3,0	1/1:5,45:47:3.01:39,3,0	1/1:0,46:46:6.14:63,6,0	1/1:51,1:53:81.58:755,82,0	1/1:32,1:33:88.57:597,89,0	1/1:13,0:11:32.14:197,32,0	1/1:20,5:25:52.14:363,52,0	0/1:8,115:121:14.41:48,0,14	1/1:3,38:38:2.10:38,2,0	1/1:29,1:26:22.77:167,23,0	0/1:4,51:54:14.16:33,0,14	0/1:8,32:39:0.22:1,0,0	1/1:46,5:48:99:1019,133,0	1/1:23,3:23:50.97:507,51,0	1/1:6,11:13:5.93:40,6,0
chr10	100369453	.	G	GTA	350.55	PASS	AB=0.927;AC=5;AF=0.096;AN=52;BaseQRankSum=7.766;DP=1225;FS=31.340;HRun=0;HaplotypeScore=279.7207;InbreedingCoeff=0.0400;MQ=46.66;MQ0=19;MQRankSum=-6.461;QD=2.03;ReadPosRankSum=-4.208;VQSLOD=0.7521;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:17:5.92:0,6,92	0/0:19,0:19:35.92:0,36,525	./.	./.	0/0:43,1:44:42.56:0,43,599	1/1:32,0:29:0.45:2,0,0	0/0:50,0:43:49.87:0,50,756	0/0:40,0:28:56.92:0,57,839	0/0:64,2:65:17.56:0,18,202	0/1:66,4:67:99:272,0,1719	0/0:35,1:35:38.50:0,38,593	0/0:48,1:49:1.43:0,1,189	0/1:42,3:43:83.24:83,0,206	0/0:50,0:50:9.02:0,9,137	0/0:51,2:53:16.17:0,16,167	0/0:52,1:51:23.93:0,24,300	0/0:52,0:52:99:0,129,1785	0/0:35,0:35:96.27:0,96,1400	0/0:22,0:14:42:0,42,524	0/0:33,2:35:41.70:0,42,731	0/0:133,0:131:29.95:0,30,428	0/0:50,1:49:11.34:0,11,165	0/0:34,0:32:28.81:0,29,437	0/0:53,0:53:3.47:0,3,46	0/0:47,1:47:6:0,6,70	0/0:63,1:58:65.41:0,65,1847	0/1:23,3:24:92.89:93,0,595	0/0:15,0:15:21.03:0,21,265
chr10	100370367	.	GT	G	576.68	PASS	AB=0.847;AC=18;AF=0.333;AN=54;BaseQRankSum=-1.330;DP=316;FS=2.496;HRun=11;HaplotypeScore=39.9675;InbreedingCoeff=0.4898;MQ=48.85;MQ0=59;MQRankSum=-0.884;QD=6.63;ReadPosRankSum=0.197;VQSLOD=0.8685;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:6:8.86:0,9,78	0/0:55,2:4:4.35:0,4,17	0/0:53,4:10:5.99:0,6,54	0/0:9,0:8:9.02:0,9,94	0/1:4,0:3:18.30:19,0,18	0/0:5,0:4:0.47:0,0,1	0/1:5,3:5:19.89:40,0,20	0/1:9,1:9:3.77:36,0,4	0/0:7,0:7:14.91:0,15,143	0/0:12,0:11:24.40:0,24,214	0/1:2,1:2:2.82:19,0,3	0/0:5,0:5:6.88:0,7,53	0/0:4,0:3:5.04:0,5,38	0/0:9,0:8:17.92:0,18,184	1/1:4,1:3:8.73:61,9,0	0/0:22,0:17:33.28:0,33,310	1/1:4,2:5:11.93:92,12,0	1/1:7,2:8:14.93:117,15,0	1/1:8,4:12:20.83:159,21,0	0/0:4,0:2:0:0,0,0	0/0:9,0:7:9.12:0,9,73	0/0:3,0:2:6.02:0,6,64	0/0:8,0:8:14.98:0,15,133	0/0:6,0:6:14.99:0,15,144	1/1:9,2:9:10.98:112,11,0	1/1:10,2:10:1.54:66,2,0	1/1:4,2:3:3:25,3,0
chr10	100370594	.	TA	T	444.70	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.506;DP=555;FS=10.168;HRun=9;HaplotypeScore=57.9998;InbreedingCoeff=0.8868;MQ=65.19;MQ0=1;MQRankSum=-1.437;QD=20.21;ReadPosRankSum=1.525;VQSLOD=3.9759;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:59.99:539,60,0	0/0:8,0:8:24.04:0,24,263	0/0:16,0:9:8.90:0,9,60	0/0:13,0:11:8.50:0,9,57	0/0:16,0:16:44.86:0,45,486	0/0:31,0:32:62.15:0,62,715	0/0:23,0:23:66.17:0,66,743	0/0:24,0:24:66.16:0,66,735	0/0:19,0:19:45.12:0,45,510	0/0:19,0:19:54.07:0,54,585	0/0:25,0:25:60.10:0,60,658	0/0:17,0:17:39.12:0,39,451	0/0:15,0:15:36.11:0,36,416	0/0:14,0:14:39.10:0,39,441	0/0:21,0:21:51.15:0,51,590	0/0:18,0:18:51.14:0,51,579	0/0:25,0:25:69.14:0,69,773	0/0:16,0:16:42.04:0,42,456	0/0:20,0:20:45.10:0,45,491	0/0:22,0:22:63.16:0,63,708	0/0:25,0:25:66.07:0,66,717	0/0:17,0:17:45.11:0,45,500	0/0:17,0:17:48.14:0,48,555	0/0:21,0:21:60.15:0,60,672	0/0:23,0:23:63.15:0,63,699	0/0:31,0:31:81.21:0,81,905	0/0:23,0:23:66.16:0,66,740	0/0:12,0:12:28.61:0,29,303
chr10	100372266	.	A	AACACACACAC	1192.21	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=2.922;DP=610;FS=0.000;HRun=0;HaplotypeScore=213.6906;InbreedingCoeff=0.2039;MQ=59.48;MQ0=17;MQRankSum=-0.800;QD=4.50;ReadPosRankSum=-3.002;VQSLOD=2.2191;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,4:19:2.94:18,3,0	0/0:13,0:13:27.09:0,27,729	0/0:35,0:18:5.98:0,6,105	0/0:39,0:15:11.04:0,11,126	0/0:21,0:21:33.08:0,33,861	1/1:22,0:21:25.29:615,25,0	1/1:19,0:19:12.77:246,13,0	0/1:32,0:31:99:105,0,136	0/0:30,0:30:6.36:0,6,266	0/0:32,0:32:59.50:0,60,1258	0/0:14,0:14:13.58:0,14,364	0/0:25,0:25:33.08:0,33,830	0/0:15,0:15:33.11:0,33,951	0/0:14,0:13:18.06:0,18,540	0/0:19,0:19:42.14:0,42,1102	0/1:27,0:27:2.26:2,0,57	0/0:13,0:11:24.06:0,24,490	0/1:15,0:14:28.21:28,0,92	0/1:26,0:26:87.14:87,0,152	0/1:27,0:27:28.25:28,0,82	0/1:26,0:25:12.23:72,0,12	0/0:27,0:26:54.17:0,54,1438	0/0:14,0:14:18.04:0,18,458	0/0:17,0:16:27.09:0,27,759	0/0:17,0:17:30.09:0,30,792	0/1:22,0:22:49.73:50,0,83	0/1:15,0:15:46.79:47,0,137	1/1:12,0:11:1.82:59,2,0
chr10	100372318	.	GAA	G	2471.88	PASS	AB=0.949;AC=39;AF=0.750;AN=52;BaseQRankSum=-0.112;DP=405;FS=4.323;HRun=3;HaplotypeScore=99.5047;InbreedingCoeff=-0.2619;MQ=43.98;MQ0=37;MQRankSum=2.123;QD=6.10;ReadPosRankSum=2.555;VQSLOD=0.3983;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:8:0.48:39,0,0	0/1:9,0:8:34.77:35,0,47	./.	./.	0/1:13,0:13:10.44:34,0,10	1/1:20,0:16:12.72:181,13,0	1/1:15,0:12:8.08:74,8,0	1/1:6,13:18:28.59:257,29,0	1/1:19,0:18:34.73:240,35,0	0/1:14,10:24:88.66:89,0,103	0/1:6,8:11:7.14:13,0,7	0/1:18,0:18:49.95:61,0,50	0/1:13,0:13:39.28:39,0,126	0/1:19,0:17:28.02:28,0,117	0/1:18,0:18:56.62:85,0,57	1/1:16,1:16:19.52:152,20,0	0/1:17,0:13:25.82:26,0,75	1/1:13,0:11:9.60:160,10,0	1/1:3,12:13:35.74:265,36,0	1/1:19,0:18:21.39:146,21,0	1/1:5,19:21:5.92:39,6,0	0/1:18,0:16:49.17:49,0,105	0/1:5,0:5:5:5,0,14	0/1:16,0:12:4.56:5,0,56	0/1:12,0:11:10.36:10,0,30	1/1:16,0:15:44.64:335,45,0	1/1:9,0:9:20.36:144,20,0	1/1:12,0:7:17.32:111,17,0
chr10	100372320	.	AAGAG	A	591.51	PASS	AB=1.000;AC=12;AF=0.261;AN=46;BaseQRankSum=-2.592;DP=417;FS=6.520;HRun=0;HaplotypeScore=120.7629;InbreedingCoeff=0.2631;MQ=43.32;MQ0=39;MQRankSum=1.509;QD=4.52;ReadPosRankSum=-0.007;VQSLOD=2.0391;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:10:2.95:0,3,23	0/0:9,0:8:3.47:0,3,27	./.	./.	1/1:7,4:11:5.70:39,6,0	0/0:22,0:18:7.03:0,7,52	0/0:16,0:13:0.53:0,1,1	0/0:20,0:19:0:0,0,0	0/0:20,0:19:1.34:0,1,4	0/0:23,0:23:8.01:0,8,91	0/0:14,0:11:2.04:0,2,6	1/1:19,0:19:27.77:322,28,0	1/1:13,0:13:5.91:138,6,0	0/1:20,0:18:30.45:30,0,65	1/1:19,0:19:11.50:83,12,0	0/0:18,0:17:5.80:0,6,43	0/1:17,0:12:2.35:40,0,2	0/0:14,0:12:4.55:0,5,28	./.	0/0:19,0:19:8.75:0,9,51	./.	./.	0/0:2,2:4:0:0,0,0	0/1:14,0:10:20.77:38,0,21	0/0:14,0:12:0:0,0,0	0/1:18,0:17:30.32:30,0,52	0/0:12,0:12:3.90:0,4,21	0/0:12,0:7:2.84:0,3,9
chr10	100375251	.	A	AT	671.63	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.782;DP=694;FS=0.000;HRun=4;HaplotypeScore=62.6278;InbreedingCoeff=0.9998;MQ=82.55;MQ0=0;MQRankSum=-3.657;QD=30.53;ReadPosRankSum=0.707;VQSLOD=3.6658;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:57.18:767,57,0	0/0:13,0:13:39.11:0,39,442	0/0:17,0:17:45.10:0,45,487	0/0:21,0:21:53.93:0,54,576	0/0:26,0:26:75.20:0,75,841	0/0:32,0:32:90.26:0,90,1021	0/0:14,0:14:42.10:0,42,467	0/0:32,0:32:90.26:0,90,1021	0/0:22,0:22:66.19:0,66,748	0/0:35,0:35:96.25:0,96,1065	0/0:24,0:24:66.19:0,66,749	0/0:20,0:20:54.14:0,54,603	0/0:21,0:21:60.17:0,60,681	0/0:30,0:30:81.21:0,81,909	0/0:28,0:27:84.24:0,84,953	0/0:20,0:20:60.16:0,60,671	0/0:20,0:20:60.16:0,60,672	0/0:20,0:20:51.14:0,51,579	0/0:30,0:30:69.19:0,69,783	0/0:34,0:34:99:0,99,1122	0/0:20,0:20:57.16:0,57,647	0/0:27,0:27:78.22:0,78,885	0/0:34,0:34:99:0,102,1134	0/0:15,0:15:42.12:0,42,476	0/0:26,0:26:75.21:0,75,851	0/0:35,0:35:99:0,105,1184	0/0:36,0:36:99:0,102,1137	0/0:20,0:20:48.13:0,48,544
chr10	100375509	.	CAAAAGAGTGATATAGGGGTTGGGGAAAAATAAAAA	C	455.18	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.426;DP=534;FS=2.991;HRun=0;HaplotypeScore=439.3858;InbreedingCoeff=0.8076;MQ=80.25;MQ0=0;MQRankSum=-2.409;QD=37.93;ReadPosRankSum=-0.159;VQSLOD=0.7281;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,7:12:6.02:535,6,0	0/0:7,0:7:15.05:0,15,1436	0/0:17,0:16:24.08:0,24,914	0/0:15,0:14:30.10:0,30,1554	0/0:39,0:39:93.31:0,93,10851	0/0:18,0:18:39.13:0,39,4686	0/0:4,0:4:9.03:0,9,753	0/0:27,0:27:60.21:0,60,3855	0/0:18,0:18:39.13:0,39,3792	0/0:35,0:35:72.25:0,72,8462	0/0:30,0:30:84.29:0,84,9726	0/0:11,0:11:30.10:0,30,3674	0/0:18,0:18:54.19:0,54,6663	0/0:17,0:17:45.15:0,45,5467	0/0:16,0:16:42.14:0,42,4653	0/0:17,0:17:33.04:0,33,3919	0/0:17,0:17:45.13:0,45,5372	0/0:8,0:8:18.06:0,18,1360	0/0:20,0:20:48.16:0,48,4374	0/0:36,0:36:99:0,102,12322	0/0:12,0:12:33.11:0,33,3581	0/0:14,0:14:33.08:0,33,3667	0/0:31,0:31:75.26:0,75,9284	0/0:19,0:19:45.15:0,45,6137	0/0:17,0:17:45.15:0,45,5395	0/0:21,0:21:60.21:0,60,6062	0/0:24,0:24:54.17:0,54,6475	0/0:14,0:14:36.12:0,36,3750
chr10	100375539	.	T	TAA	7346.90	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-13.030;DP=545;FS=9.448;HRun=9;HaplotypeScore=66.8146;InbreedingCoeff=0.9749;MQ=75.33;MQ0=0;MQRankSum=0.815;QD=30.61;ReadPosRankSum=-0.237;VQSLOD=4.1290;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:5.60:0,6,25	0/0:6,0:6:15.04:0,15,160	0/0:28,0:20:35.83:0,36,338	0/0:14,0:13:23.99:0,24,205	0/0:33,0:33:87.16:0,87,910	1/1:2,21:25:54.18:814,54,0	1/1:1,4:5:12.04:185,12,0	1/1:4,19:25:57.14:764,57,0	1/1:6,14:20:30.07:436,30,0	0/0:33,0:33:81.15:0,81,856	0/0:29,0:30:80.80:0,81,824	0/0:13,0:13:36.05:0,36,372	0/0:18,0:18:45.10:0,45,479	0/0:16,0:16:39.06:0,39,407	0/0:16,0:16:42.06:0,42,423	1/1:2,15:17:29.87:435,30,0	0/0:14,0:14:42.09:0,42,438	1/1:1,8:9:15.05:231,15,0	1/1:6,9:16:31.37:383,31,0	1/1:3,31:36:93.10:1364,93,0	1/1:1,10:12:29.59:424,30,0	0/0:16,0:16:45.08:0,45,463	0/0:25,0:25:69.17:0,69,734	0/0:18,0:18:48.06:0,48,493	0/0:18,0:18:48.11:0,48,510	1/1:9,19:29:28.30:760,28,0	1/1:4,19:24:57.19:857,57,0	1/1:5,16:22:45.15:693,45,0
chr10	100376850	.	GCA	G	1257.21	PASS	AB=0.889;AC=43;AF=0.860;AN=50;BaseQRankSum=4.290;DP=489;FS=2.939;HRun=0;HaplotypeScore=68.0893;InbreedingCoeff=-0.0232;MQ=69.75;MQ0=19;MQRankSum=1.002;QD=3.27;ReadPosRankSum=1.363;VQSLOD=1.5721;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:36:4.88:20,5,0	1/1:4,3:7:3:32,3,0	./.	./.	1/1:12,0:19:5.68:28,6,0	0/1:16,2:18:16.99:26,0,17	0/0:11,0:10:12.04:0,12,171	./.	1/1:11,0:15:14.37:85,14,0	1/1:7,2:9:3.01:32,3,0	1/1:11,2:14:7.11:74,7,0	1/1:8,3:11:14.70:123,15,0	1/1:10,0:10:2.84:14,3,0	1/1:10,1:12:5.85:46,6,0	1/1:16,2:19:8.65:59,9,0	1/1:8,4:13:14.87:141,15,0	0/1:19,2:21:51.57:52,0,76	1/1:22,4:22:7.27:92,7,0	0/1:10,3:12:25.80:26,0,37	1/1:9,3:12:3.01:32,3,0	1/1:18,1:21:11.67:84,12,0	1/1:7,3:11:5.85:46,6,0	1/1:9,3:13:8.86:78,9,0	1/1:21,2:27:11.83:100,12,0	1/1:11,4:14:6:57,6,0	0/1:16,0:16:39.12:39,0,53	0/1:14,3:18:26.67:91,0,27	1/1:5,0:5:2.68:11,3,0
chr10	100377740	.	C	CT	6174.53	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=13.608;DP=435;FS=19.716;HRun=7;HaplotypeScore=68.8129;InbreedingCoeff=0.9457;MQ=73.67;MQ0=0;MQRankSum=-7.978;QD=28.59;ReadPosRankSum=-1.434;VQSLOD=2.9335;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,11:16:39.07:443,39,0	0/0:5,0:5:15.02:0,15,145	0/0:11,0:10:24.03:0,24,230	0/0:10,0:10:5.58:0,6,90	0/0:21,0:21:60.08:0,60,574	1/1:2,18:20:54.17:652,54,0	1/1:3,12:14:36.11:434,36,0	1/1:10,14:23:51.14:597,51,0	1/1:1,18:19:54.17:652,54,0	0/0:25,0:25:71.90:0,72,676	0/0:15,0:15:39.05:0,39,371	0/0:15,0:15:42.07:0,42,406	0/0:14,0:14:39.05:0,39,371	0/0:13,0:13:36.05:0,36,348	0/0:14,0:14:39.05:0,39,371	1/1:2,14:16:45.14:543,45,0	0/0:22,0:22:54.08:0,54,521	1/1:6,11:17:39.08:455,39,0	1/1:11,13:24:48.06:533,48,0	1/1:1,19:20:57.17:688,57,0	1/1:2,9:11:21.06:254,21,0	0/0:15,0:15:39.06:0,39,377	0/0:17,0:17:48.05:0,48,452	0/0:7,0:7:1.13:0,1,154	0/0:15,0:15:45.07:0,45,434	1/1:5,12:17:42.10:490,42,0	1/1:3,7:11:24.07:289,24,0	1/1:2,4:6:12.04:145,12,0
chr10	100377770	.	GAA	G	4397.02	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=11.784;DP=386;FS=9.624;HRun=9;HaplotypeScore=72.9866;InbreedingCoeff=0.9666;MQ=75.55;MQ0=0;MQRankSum=-13.531;QD=26.02;ReadPosRankSum=-0.702;VQSLOD=3.6790;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:15:33.09:384,33,0	0/0:5,0:5:12.04:0,12,197	0/0:17,0:17:41.53:0,42,535	0/0:11,0:11:19.61:0,20,264	0/0:20,0:20:49.41:0,49,786	1/1:3,14:17:45.13:523,45,0	1/1:6,7:11:15.03:175,15,0	1/1:5,18:22:54.10:606,54,0	1/1:3,9:12:30.07:339,30,0	0/0:18,0:18:48.16:0,48,781	0/0:14,0:14:36.12:0,36,587	0/0:15,0:15:45.13:0,45,691	0/0:14,0:14:36.12:0,36,580	0/0:11,0:11:30.10:0,30,483	0/0:12,0:12:30.10:0,30,492	1/1:2,9:11:27.08:314,27,0	0/0:21,0:21:57.19:0,57,935	1/1:4,7:11:24.06:279,24,0	1/1:6,12:18:42.11:480,42,0	1/1:1,13:14:39.03:424,39,0	1/1:5,6:11:17.96:191,18,0	0/0:14,0:14:42.14:0,42,670	0/0:16,0:16:39.13:0,39,635	0/0:10,0:10:30.10:0,30,483	0/0:18,0:18:54.18:0,54,885	1/1:4,10:14:33.09:384,33,0	1/1:1,8:9:24:262,24,0	1/1:0,1:1:3.01:35,3,0
chr10	100377829	.	AG	A	6569.86	PASS	AB=0.684;AC=23;AF=0.411;AN=56;BaseQRankSum=11.246;DP=434;FS=1.625;HRun=1;HaplotypeScore=50.4929;InbreedingCoeff=0.8157;MQ=73.02;MQ0=0;MQRankSum=-5.923;QD=35.32;ReadPosRankSum=-0.796;VQSLOD=4.3106;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:66.22:0,66,1030	0/0:11,0:11:33.03:0,33,443	0/1:12,0:11:8.69:9,0,412	0/0:14,0:14:37.77:0,38,580	0/0:18,0:18:54.17:0,54,820	1/1:0,15:15:45.12:607,45,0	1/1:0,19:18:51.17:711,51,0	1/1:0,22:22:60.20:825,60,0	0/1:1,7:8:25.73:229,0,26	0/0:16,0:16:48.16:0,48,731	0/0:16,0:16:48.11:0,48,662	0/0:19,0:19:57.17:0,57,848	0/0:9,0:9:27.09:0,27,422	0/0:14,0:14:42.14:0,42,647	0/0:12,0:12:33.10:0,33,493	1/1:0,7:7:21.07:294,21,0	0/0:26,0:26:78.25:0,78,1193	1/1:0,18:18:48.16:670,48,0	1/1:0,17:17:51.17:709,51,0	0/1:1,14:15:1.93:493,0,2	1/1:1,17:18:48.12:648,48,0	0/0:14,0:14:42.12:0,42,633	0/0:21,0:21:63.20:0,63,963	0/0:18,0:18:48.15:0,48,727	0/0:14,0:14:42.13:0,42,635	1/1:0,14:13:39.09:519,39,0	1/1:0,14:14:42.14:586,42,0	1/1:0,7:7:21.03:271,21,0
chr10	100377918	.	G	GAA	266.17	PASS	AB=0.900;AC=3;AF=0.056;AN=54;BaseQRankSum=4.777;DP=396;FS=8.190;HRun=7;HaplotypeScore=83.8192;InbreedingCoeff=0.3902;MQ=47.59;MQ0=24;MQRankSum=-2.690;QD=8.59;ReadPosRankSum=-2.340;VQSLOD=-0.4944;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,12:15:26.98:349,27,0	0/0:10,0:8:15.01:0,15,154	0/0:14,0:2:2.42:0,2,15	./.	0/0:10,0:11:23.76:0,24,257	0/0:9,0:9:11.87:0,12,139	0/0:21,0:12:29.21:0,29,337	0/0:24,0:22:28.47:0,28,457	0/0:11,0:8:12.03:0,12,140	0/0:14,0:14:27.06:0,27,307	0/0:16,0:16:42.12:0,42,482	0/0:14,0:14:20.67:0,21,244	0/0:7,0:7:15.01:0,15,160	0/0:12,0:12:11.81:0,12,140	0/0:11,0:10:24.06:0,24,279	0/0:7,0:7:12.03:0,12,135	0/0:26,0:26:52.40:0,52,599	0/1:8,1:7:20.52:21,0,113	0/0:23,0:19:18.61:0,19,435	0/0:21,0:21:6.92:0,7,291	0/0:9,0:9:3:0,3,35	0/0:18,0:18:17.33:0,17,206	0/0:16,0:16:33.05:0,33,374	0/0:18,0:17:35.80:0,36,419	0/0:14,0:13:32.95:0,33,371	0/0:10,0:9:17.36:0,17,159	0/0:3,0:3:3:0,3,35	0/0:11,0:12:20.79:0,21,203
chr10	100378191	.	T	TATGA	5086.10	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=16.477;DP=585;FS=2.505;HRun=0;HaplotypeScore=135.9449;InbreedingCoeff=0.9640;MQ=85.06;MQ0=0;MQRankSum=-16.372;QD=17.30;ReadPosRankSum=-0.350;VQSLOD=4.4711;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.32:0,93,1745	0/0:7,0:7:21.07:0,21,399	0/0:23,0:23:63.05:0,63,1044	0/0:28,0:28:81.28:0,81,1505	0/0:13,0:13:33.11:0,33,627	1/1:2,0:16:42.07:421,42,0	1/1:4,0:23:62.96:583,63,0	1/1:5,0:36:93.04:878,93,0	1/1:5,0:18:42.07:403,42,0	0/0:22,0:21:66.23:0,66,1251	0/0:12,0:12:33.10:0,33,594	0/0:13,0:13:36.12:0,36,683	0/0:18,0:18:51.14:0,51,897	0/0:14,0:14:42.14:0,42,798	0/0:21,0:21:63.22:0,63,1190	1/1:4,1:37:14.93:175,15,0	0/0:21,0:21:59.87:0,60,1093	1/1:2,0:7:15.02:144,15,0	1/1:7,0:26:60.09:592,60,0	1/1:2,0:19:51.08:490,51,0	1/1:3,0:16:33.04:312,33,0	0/0:14,0:14:39.12:0,39,703	0/0:15,0:15:45.15:0,45,854	0/0:24,0:24:66.23:0,66,1253	0/0:14,0:14:42.14:0,42,797	1/1:6,0:35:93.13:906,93,0	1/1:3,0:31:5.50:91,5,0	1/1:3,0:28:6.02:92,6,0
chr10	100378285	.	GT	G	5372.22	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=7.586;DP=534;FS=0.341;HRun=9;HaplotypeScore=59.2329;InbreedingCoeff=0.9965;MQ=77.11;MQ0=0;MQRankSum=-2.943;QD=21.84;ReadPosRankSum=-0.607;VQSLOD=5.1852;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:25:51.47:0,51,300	0/0:7,0:7:17.59:0,18,200	0/0:11,0:11:23.55:0,24,242	0/0:14,0:14:18.03:0,18,195	0/0:24,0:24:69.12:0,69,763	1/1:5,4:10:22.85:178,23,0	1/1:5,13:18:30:275,30,0	1/1:3,17:20:50.94:451,51,0	1/1:2,17:19:51.03:467,51,0	0/0:21,0:21:57.11:0,57,620	0/0:20,1:21:23.58:0,24,547	0/0:13,0:14:41.96:0,42,465	0/0:20,0:20:51.15:0,51,589	0/0:17,0:17:51.14:0,51,576	0/0:20,0:20:48.14:0,48,554	1/1:4,10:14:36:325,36,0	0/0:21,0:21:60.18:0,60,692	1/1:0,16:16:42.02:384,42,0	1/1:5,22:27:66.03:603,66,0	1/1:1,27:28:71.83:635,72,0	1/1:1,17:18:47.96:426,48,0	0/0:19,0:19:48.04:0,48,515	0/0:24,0:24:69.10:0,69,762	0/0:13,0:13:36.11:0,36,415	0/0:16,1:16:45.13:0,45,519	1/1:10,20:30:68.93:615,69,0	1/1:4,16:20:56.90:521,57,0	1/1:8,18:26:54.03:494,54,0
chr10	100378639	.	A	ATC	12429.66	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-17.144;DP=683;FS=3.131;HRun=0;HaplotypeScore=71.4856;InbreedingCoeff=0.9993;MQ=86.30;MQ0=3;MQRankSum=-1.307;QD=37.90;ReadPosRankSum=0.081;VQSLOD=6.8801;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:39.12:0,39,496	0/0:11,0:11:30.10:0,30,382	0/0:24,0:24:34.74:0,35,487	0/0:25,0:24:37.93:0,38,427	0/0:25,0:25:72.22:0,72,902	1/1:5,26:31:69.24:1155,69,0	1/1:2,11:13:21.07:351,21,0	1/1:15,34:49:99:1727,105,0	1/1:3,17:20:42.14:703,42,0	0/0:25,0:25:54.17:0,54,688	0/0:27,0:27:69.22:0,69,878	0/0:20,0:20:60.19:0,60,764	0/0:23,0:23:60.19:0,60,764	0/0:17,0:17:48.15:0,48,611	0/0:23,0:23:60.19:0,60,764	1/1:1,20:22:57.19:954,57,0	0/0:23,0:23:66.18:0,66,812	1/1:5,15:20:42.14:703,42,0	1/1:6,21:27:63.22:1047,63,0	1/1:0,28:28:81.28:1329,81,0	1/1:2,34:35:87.30:1456,87,0	0/0:19,0:19:45.14:0,45,573	0/0:31,0:31:81.24:0,81,1016	0/0:20,0:19:57.18:0,57,725	0/0:20,0:20:48.15:0,48,610	1/1:2,22:24:63.20:1003,63,0	1/1:6,28:34:81.28:1350,81,0	1/1:3,19:22:39.13:652,39,0
chr10	100379429	.	T	TG	652.67	PASS	AB=0.933;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.801;DP=646;FS=17.251;HRun=9;HaplotypeScore=71.0233;InbreedingCoeff=0.6222;MQ=73.29;MQ0=0;MQRankSum=-0.403;QD=8.48;ReadPosRankSum=-3.608;VQSLOD=-0.1738;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:16,33:48:26.57:745,27,0	0/0:11,0:11:19.72:0,20,180	0/1:26,1:27:6.23:6,0,275	0/0:20,1:22:26.58:0,27,255	0/0:25,0:25:62.91:0,63,533	0/0:22,0:22:56.02:0,56,475	0/0:27,0:27:56.96:0,57,495	0/0:22,0:22:21.22:0,21,318	0/0:22,0:22:56.98:0,57,494	0/0:20,0:20:41.97:0,42,362	0/0:20,0:20:53.99:0,54,469	0/0:18,0:18:53.96:0,54,463	0/0:17,0:17:41.98:0,42,365	0/0:19,0:19:53.99:0,54,469	0/0:30,0:30:71.97:0,72,625	0/0:21,0:21:53.99:0,54,469	0/0:31,1:32:44.80:0,45,618	0/0:19,0:18:50.99:0,51,443	0/0:17,1:19:4.82:0,5,252	0/0:24,0:24:62.96:0,63,543	0/0:25,0:25:71.98:0,72,625	0/0:25,0:26:68.96:0,69,595	0/0:22,0:22:56.98:0,57,495	0/0:29,0:29:80.93:0,81,696	0/0:23,0:22:50.98:0,51,443	0/0:19,1:20:15.30:0,15,358	0/0:22,0:22:59.97:0,60,521	0/0:12,0:12:32.99:0,33,286
chr10	100382596	.	T	TGC	35.74	PASS	AC=2;AF=0.083;AN=24;BaseQRankSum=2.154;DP=623;FS=0.000;HRun=0;HaplotypeScore=28.3215;InbreedingCoeff=0.5248;MQ=11.25;MQ0=449;MQRankSum=0.817;QD=1.88;ReadPosRankSum=-0.520;VQSLOD=0.7548;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:9,0:4:9.03:0,9,132	./.	./.	0/0:7,0:5:3.01:0,3,44	./.	./.	./.	./.	0/0:15,0:8:18.06:0,18,257	0/0:14,0:9:15.05:0,15,220	0/0:31,0:5:12.04:0,12,176	0/0:27,0:4:9.03:0,9,132	0/0:36,0:7:12.04:0,12,176	0/0:29,0:2:6.02:0,6,82	./.	./.	./.	./.	./.	./.	0/0:13,0:12:24.08:0,24,353	0/0:13,0:9:21.07:0,21,309	./.	0/0:13,0:7:15.05:0,15,220	1/1:17,2:3:6.02:112,6,0	./.	./.
chr10	100388807	.	CA	C	876.18	PASS	AB=0.778;AC=25;AF=0.446;AN=56;BaseQRankSum=3.323;DP=358;FS=2.373;HRun=14;HaplotypeScore=40.6442;InbreedingCoeff=0.2209;MQ=61.08;MQ0=13;MQRankSum=0.912;QD=4.52;ReadPosRankSum=2.754;VQSLOD=0.4384;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:12,1:13:8.75:9,0,53	0/0:5,1:7:0.25:0,0,125	0/0:37,0:7:6.66:0,7,84	0/0:26,0:9:5.08:0,5,31	0/1:16,2:18:33.36:33,0,131	0/1:5,2:7:11.33:43,0,11	1/1:1,4:5:2.93:21,3,0	0/1:16,6:25:9.05:66,0,9	1/1:3,5:8:14.86:103,15,0	0/0:17,0:16:21.41:0,21,174	0/0:19,0:19:41.73:0,42,347	0/0:6,0:6:0:0,0,0	0/0:5,0:5:8.98:0,9,71	0/1:2,1:3:14.57:15,0,22	0/0:7,0:7:3:0,3,28	1/1:1,3:4:5.92:41,6,0	0/1:9,4:13:28.70:29,0,190	1/1:8,4:9:5.85:41,6,0	0/1:5,7:12:1.14:133,0,1	1/1:9,11:21:8.90:181,9,0	1/1:3,3:5:5.93:41,6,0	0/0:5,0:7:17.68:0,18,137	0/1:9,1:10:8.58:9,0,67	0/0:16,1:17:15.44:0,15,279	0/0:14,1:16:7.53:0,8,160	0/1:3,5:9:1.78:71,0,2	1/1:8,9:18:25.64:170,26,0	1/1:7,2:9:5.87:41,6,0
chr10	100391221	.	A	AT	3453.10	PASS	AC=24;AF=0.444;AN=54;BaseQRankSum=6.559;DP=181;FS=7.126;HRun=4;HaplotypeScore=27.9206;InbreedingCoeff=0.7986;MQ=83.31;MQ0=1;MQRankSum=-2.623;QD=34.19;ReadPosRankSum=2.043;VQSLOD=3.3244;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:15.05:205,15,0	0/0:2,0:2:6.02:0,6,68	0/0:5,0:6:9.12:0,9,71	0/0:9,0:6:5.88:0,6,49	0/0:8,0:8:21.06:0,21,238	1/1:0,8:8:18.06:246,18,0	1/1:1,2:3:3.01:41,3,0	1/1:4,35:39:99:1444,108,0	1/1:0,3:3:9.03:123,9,0	0/0:7,0:7:21.06:0,21,238	0/0:7,0:7:21.06:0,21,238	0/0:2,0:2:6.02:0,6,68	0/0:3,0:3:9.03:0,9,102	0/0:2,0:2:6.02:0,6,68	0/0:4,0:4:12.02:0,12,126	./.	0/0:16,0:16:45.13:0,45,510	1/1:0,8:8:24.05:308,24,0	1/1:1,6:7:21.04:266,21,0	1/1:0,4:4:12.04:164,12,0	1/1:0,5:5:15.05:205,15,0	0/0:1,0:1:3.01:0,3,34	0/0:2,0:2:6:0,6,58	0/0:4,0:4:9.02:0,9,102	0/0:7,0:7:15.04:0,15,170	1/1:2,2:4:6.02:81,6,0	1/1:1,3:4:9.03:123,9,0	1/1:2,6:8:18.06:246,18,0
chr10	100393322	.	CACA	C	1369.67	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.317;DP=643;FS=10.399;HRun=0;HaplotypeScore=110.9687;InbreedingCoeff=0.9951;MQ=68.17;MQ0=0;MQRankSum=-2.719;QD=39.13;ReadPosRankSum=-0.650;VQSLOD=4.4647;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:35:87.25:1465,87,0	0/0:12,0:12:36.12:0,36,787	0/0:11,0:11:33.05:0,33,507	0/0:17,0:15:24.42:0,24,551	0/0:28,0:28:81.24:0,81,1736	0/0:20,0:20:59.39:0,59,843	0/0:18,0:18:52.35:0,52,746	0/0:28,0:28:81.94:0,82,1075	0/0:20,0:20:57.18:0,57,827	0/0:27,0:27:74.63:0,75,1520	0/0:38,0:38:99:0,114,2440	0/0:18,0:18:51.13:0,51,1016	0/0:24,0:24:72.20:0,72,1465	0/0:23,0:23:69.20:0,69,1422	0/0:26,0:26:75.22:0,75,1553	0/0:17,0:17:48.16:0,48,714	0/0:34,0:34:99:0,102,2087	0/0:8,0:8:22.89:0,23,327	0/0:21,0:21:60.95:0,61,759	0/0:34,0:34:99:0,99,1508	0/0:24,0:24:65.02:0,65,934	0/0:28,0:28:84.26:0,84,1761	0/0:22,0:22:66.20:0,66,1387	0/0:23,0:23:69.19:0,69,1441	0/0:14,0:14:42.13:0,42,873	0/0:21,0:21:63.12:0,63,836	0/0:34,0:34:99:0,102,1491	0/0:18,0:18:54.18:0,54,837
chr10	100393324	.	CA	C	276.21	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.352;DP=647;FS=8.395;HRun=9;HaplotypeScore=89.3180;InbreedingCoeff=0.8660;MQ=68.11;MQ0=0;MQRankSum=-1.849;QD=8.12;ReadPosRankSum=-1.335;VQSLOD=1.4403;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:78.19:371,78,0	0/0:13,0:13:39.12:0,39,449	0/0:11,1:12:4.97:0,5,223	0/0:15,1:14:15.02:0,15,205	0/0:27,0:27:72.21:0,72,831	0/0:19,0:19:49.62:0,50,318	0/0:19,0:19:51.82:0,52,322	0/0:29,0:29:70.64:0,71,408	0/0:19,0:19:47.38:0,47,311	0/0:28,0:28:71.02:0,71,799	0/0:38,1:39:83.84:0,84,1204	0/0:19,0:19:48.11:0,48,526	0/0:24,0:24:63.18:0,63,718	0/0:23,0:24:60.17:0,60,683	0/0:25,0:25:69.20:0,69,795	0/0:17,0:17:45.88:0,46,288	0/0:34,0:34:93.28:0,93,1071	0/0:8,0:8:22.57:0,23,144	0/0:21,0:21:47.75:0,48,280	0/0:33,0:33:94.86:0,95,634	0/0:23,0:23:61:0,61,391	0/0:28,0:29:81.06:0,81,904	0/0:22,0:23:60.01:0,60,672	0/0:23,0:23:60.18:0,60,692	0/0:14,1:15:17.64:0,18,444	0/0:22,0:22:52.25:0,52,307	0/0:34,0:34:89.02:0,89,609	0/0:18,0:18:53.44:0,53,367
chr10	100393761	.	T	TA	1209.83	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.040;DP=552;FS=3.053;HRun=7;HaplotypeScore=51.0536;InbreedingCoeff=0.9605;MQ=77.49;MQ0=0;MQRankSum=-0.191;QD=28.81;ReadPosRankSum=0.483;VQSLOD=4.2322;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,38:42:99:1305,108,0	0/0:13,0:13:33.05:0,33,318	0/0:13,0:13:27:0,27,248	0/0:19,0:19:41.21:0,41,421	0/0:12,0:12:36.06:0,36,348	0/0:32,0:32:81.12:0,81,782	0/0:24,0:24:63.09:0,63,608	0/0:23,0:23:60.08:0,60,575	0/0:20,0:20:54.07:0,54,516	0/0:19,0:19:51.08:0,51,492	0/0:14,0:14:39.06:0,39,376	0/0:16,0:16:42.04:0,42,394	0/0:22,0:22:66.06:0,66,623	0/0:20,0:20:60.10:0,60,579	0/0:29,0:29:81.12:0,81,782	0/0:17,0:17:48.08:0,48,463	0/0:21,0:21:60.06:0,60,568	0/0:6,0:6:18.03:0,18,174	0/0:19,0:19:57.09:0,57,550	0/0:18,0:18:48.07:0,48,463	0/0:31,0:30:87.07:0,87,828	0/0:15,0:15:42.07:0,42,406	0/0:19,0:19:51.06:0,51,485	0/0:11,0:11:30.04:0,30,290	0/0:14,0:14:42.07:0,42,406	0/0:31,0:30:72.10:0,72,695	0/0:27,0:27:75.09:0,75,716	0/0:4,0:4:12:0,12,109
chr10	100394017	.	CTATTAT	C	410.27	PASS	AB=0.800;AC=11;AF=0.367;AN=30;BaseQRankSum=4.184;DP=241;FS=0.000;HRun=0;HaplotypeScore=53.4968;InbreedingCoeff=0.4080;MQ=77.77;MQ0=0;MQRankSum=-1.996;QD=7.07;ReadPosRankSum=-0.354;VQSLOD=1.4963;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:9:5.52:61,6,0	0/0:6,0:6:9.03:0,9,245	./.	./.	0/0:5,0:6:2.97:0,3,20	1/1:7,1:8:3.01:60,3,0	./.	./.	1/1:7,1:8:3.01:60,3,0	0/0:3,0:3:3.01:0,3,54	./.	0/0:4,0:4:2.96:0,3,19	0/0:5,0:5:3.01:0,3,96	./.	0/0:7,0:7:5.93:0,6,74	./.	0/0:19,0:19:30.10:0,30,917	./.	1/1:6,3:9:9.01:128,9,0	./.	./.	./.	./.	0/0:9,0:9:6.02:0,6,192	0/0:9,0:9:15.05:0,15,480	0/1:9,3:12:67.92:156,0,68	1/1:9,2:11:3.01:60,3,0	./.
chr10	100394023	.	T	TC	327.81	PASS	AB=1.000;AC=4;AF=0.077;AN=52;BaseQRankSum=3.174;DP=206;FS=4.644;HRun=0;HaplotypeScore=27.4747;InbreedingCoeff=0.3351;MQ=66.71;MQ0=2;MQRankSum=-3.390;QD=10.93;ReadPosRankSum=-1.540;VQSLOD=2.2403;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:9:27.09:416,27,0	0/0:4,0:4:12.04:0,12,168	0/0:8,0:7:15.03:0,15,191	0/0:2,0:2:6.02:0,6,73	0/0:4,0:4:11.98:0,12,129	0/0:7,0:7:20.86:0,21,264	0/0:1,0:1:3.01:0,3,42	0/0:28,0:27:78.24:0,78,1060	0/0:6,0:6:17.85:0,18,222	0/0:3,0:3:9.03:0,9,126	0/0:5,0:5:10.28:0,10,164	0/0:4,0:4:11.92:0,12,124	0/0:6,0:6:17.93:0,18,225	./.	0/0:5,0:5:14.92:0,15,183	0/0:2,0:2:6.02:0,6,84	0/0:20,0:20:57.19:0,57,802	0/0:15,0:15:39.05:0,39,488	0/0:8,0:7:20.85:0,21,249	0/1:8,0:8:3.94:4,0,213	./.	0/0:4,0:4:12.04:0,12,167	0/0:5,0:5:12.04:0,12,166	0/0:8,0:8:24.07:0,24,320	0/0:10,0:9:27.08:0,27,362	0/1:12,0:12:11.98:12,0,335	0/0:8,0:8:20.86:0,21,262	0/0:12,0:12:36.08:0,36,466
chr10	100394029	.	TTATTA	T	228.76	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=6.230;DP=178;FS=5.615;HRun=0;HaplotypeScore=35.5371;InbreedingCoeff=0.0891;MQ=61.23;MQ0=2;MQRankSum=-4.707;QD=4.97;ReadPosRankSum=2.633;VQSLOD=0.5954;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:8:24.06:299,24,0	0/0:4,0:4:12.04:0,12,289	0/0:4,0:3:6.90:0,7,67	0/0:1,0:1:2.74:0,3,12	0/0:3,0:3:9.03:0,9,129	0/1:7,0:7:1.80:2,0,201	0/0:1,0:1:2.99:0,3,24	0/0:24,0:23:69.21:0,69,843	0/1:5,0:5:7.82:8,0,133	0/0:4,0:4:12.04:0,12,169	0/0:4,0:4:9.03:0,9,132	0/0:3,0:3:8.99:0,9,93	0/0:6,0:6:17.09:0,17,251	0/0:1,0:1:3.01:0,3,37	0/0:4,0:4:11.99:0,12,151	0/0:2,0:2:6.02:0,6,74	0/0:19,0:19:57.19:0,57,1263	0/0:13,0:13:36.11:0,36,443	0/1:8,0:7:10.09:10,0,142	0/0:6,0:6:17.79:0,18,198	0/0:1,0:1:3.01:0,3,40	0/0:3,0:3:9.03:0,9,111	0/0:1,0:1:3.01:0,3,37	0/0:7,0:7:21.07:0,21,379	0/0:11,0:10:30.10:0,30,690	0/1:11,0:11:23.52:24,0,301	0/1:7,0:7:4.86:5,0,167	0/0:10,0:10:30.09:0,30,370
chr10	100394726	.	ACTCT	A	1514.82	PASS	AB=0.733;AC=18;AF=0.333;AN=54;BaseQRankSum=0.174;DP=518;FS=2.527;HRun=0;HaplotypeScore=93.7420;InbreedingCoeff=0.5513;MQ=68.14;MQ0=7;MQRankSum=-1.333;QD=8.76;ReadPosRankSum=0.340;VQSLOD=1.9252;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:15.03:0,15,234	0/0:15,0:19:11.05:0,11,136	0/0:26,0:17:3.01:0,3,51	./.	0/0:19,0:23:14.78:0,15,206	1/1:13,6:20:19.30:266,19,0	1/1:5,0:5:3:28,3,0	0/0:27,0:27:1.72:0,2,4	0/1:5,3:13:13.39:200,0,13	0/0:18,0:17:18.06:0,18,318	0/0:15,0:15:18.05:0,18,342	0/0:10,0:17:12.04:0,12,221	0/0:12,0:18:15.04:0,15,222	0/0:12,0:16:7.66:0,8,166	0/0:11,0:17:8.52:0,9,133	1/1:7,6:14:17.89:229,18,0	0/0:16,0:19:19.58:0,20,529	1/1:6,5:13:11.32:149,11,0	1/1:21,2:23:10.32:155,10,0	1/1:17,4:21:12:188,12,0	0/1:5,0:9:5.74:6,0,7	0/0:14,0:18:14.79:0,15,227	0/0:20,0:20:15.50:0,16,228	0/0:13,0:24:17.90:0,18,324	0/0:11,0:11:9.03:0,9,181	0/1:17,5:22:15.87:129,0,16	1/1:8,6:14:21.06:310,21,0	0/1:13,2:16:22.62:37,0,23
chr10	100406191	.	CAG	C	2277.67	PASS	AB=0.924;AC=25;AF=0.446;AN=56;BaseQRankSum=-0.400;DP=429;FS=1.457;HRun=0;HaplotypeScore=64.4256;InbreedingCoeff=0.4848;MQ=54.47;MQ0=16;MQRankSum=-2.308;QD=9.86;ReadPosRankSum=0.403;VQSLOD=3.3694;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:17.97:0,18,148	0/0:4,0:4:9.01:0,9,90	0/1:16,0:5:12.84:13,0,58	0/1:15,0:6:4.93:5,0,45	0/0:13,0:12:27:0,27,312	1/1:12,1:12:18:185,18,0	1/1:26,1:24:7.18:293,7,0	1/1:23,0:20:31.62:269,32,0	1/1:16,0:15:9.57:265,10,0	0/1:10,0:10:25.77:26,0,145	0/0:6,0:5:12.02:0,12,147	0/0:9,0:8:21.03:0,21,286	0/0:5,0:5:15:0,15,169	0/1:8,1:8:21:21,0,136	0/0:22,0:22:32.22:0,32,581	1/1:13,2:15:40.37:375,40,0	0/0:36,0:34:75.35:0,75,916	0/1:15,1:16:5.33:261,0,5	0/1:5,1:6:21.12:70,0,21	0/1:7,3:10:5.69:112,0,6	1/1:33,0:30:13.43:278,13,0	0/0:13,0:13:19.01:0,19,220	0/0:11,0:11:23.98:0,24,230	0/0:40,0:40:99:0,100,1304	0/0:8,0:7:17.92:0,18,147	1/1:9,0:9:11.18:90,11,0	1/1:9,1:10:17.56:165,18,0	1/1:3,0:2:5.99:48,6,0
chr10	100406193	.	GAC	G	130.62	PASS	AB=0.967;AC=13;AF=0.271;AN=48;BaseQRankSum=4.769;DP=451;FS=4.803;HRun=0;HaplotypeScore=75.6531;InbreedingCoeff=0.0022;MQ=54.17;MQ0=16;MQRankSum=-1.615;QD=0.78;ReadPosRankSum=3.793;VQSLOD=0.8629;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:5,0:5:6.49:0,6,85	./.	./.	0/0:11,2:12:9.03:0,9,131	1/1:13,0:12:5.96:45,6,0	1/1:28,0:24:4.90:30,5,0	0/1:24,0:21:5.01:5,0,56	0/1:15,0:14:9.69:10,0,40	0/1:8,2:10:43.62:44,0,76	0/0:5,1:5:12.03:0,12,154	0/0:9,0:8:12.04:0,12,166	0/0:7,0:7:12.01:0,12,150	0/1:9,1:9:9.08:9,0,56	0/1:22,0:23:6.55:7,0,318	0/1:15,0:15:29.64:65,0,30	0/0:34,5:37:21.45:0,21,602	0/0:18,0:18:0.22:0,0,87	0/1:6,0:6:7.45:12,0,7	0/1:14,0:14:24.42:24,0,37	0/0:37,0:34:14.86:0,15,120	0/0:13,0:13:5.85:0,6,57	0/0:11,0:11:5.93:0,6,58	0/0:41,3:44:32.57:0,33,770	0/0:8,0:7:6.02:0,6,80	0/0:10,0:10:5.75:0,6,33	0/1:10,0:10:1.20:16,0,1	./.
chr10	100406237	.	CGA	C	4131.57	PASS	AC=22;AF=0.407;AN=54;BaseQRankSum=2.512;DP=511;FS=3.206;HRun=0;HaplotypeScore=79.6060;InbreedingCoeff=0.9435;MQ=58.67;MQ0=24;MQRankSum=-0.067;QD=20.45;ReadPosRankSum=-2.361;VQSLOD=3.3739;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:6.02:0,6,94	0/0:9,0:9:27.09:0,27,434	0/0:23,0:9:12:0,12,297	0/0:28,0:15:18.88:0,19,372	0/0:16,0:14:27.08:0,27,403	1/1:14,1:15:33.08:382,33,0	1/1:20,3:19:36.06:444,36,0	1/1:3,20:21:56.93:617,57,0	1/1:11,0:10:15.06:204,15,0	0/0:17,0:17:51.14:0,51,750	0/0:19,0:17:39.13:0,39,627	0/0:10,0:10:27.09:0,27,434	0/0:8,0:8:24.08:0,24,381	0/0:13,0:12:35.72:0,36,508	0/0:23,0:23:54.17:0,54,838	1/1:14,1:15:36.46:404,36,0	0/0:42,0:40:86.07:0,86,1179	1/1:12,3:15:37.64:427,38,0	1/1:7,5:9:18.06:220,18,0	1/1:19,3:21:32.29:360,32,0	1/1:34,1:32:39.52:458,40,0	0/0:13,0:13:30.10:0,30,474	0/0:13,0:12:27.09:0,27,418	0/0:43,1:44:49.28:0,49,1453	0/0:10,0:9:27.05:0,27,408	1/1:20,0:19:6.49:551,6,0	1/1:3,8:11:5.59:62,6,0	./.
chr10	100406971	.	GGT	G	299.45	PASS	AB=1.000;AC=25;AF=0.568;AN=44;BaseQRankSum=3.777;DP=356;FS=8.201;HRun=0;HaplotypeScore=57.8358;InbreedingCoeff=0.3806;MQ=56.99;MQ0=26;MQRankSum=-1.057;QD=1.58;ReadPosRankSum=0.090;VQSLOD=0.3352;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:7:11.01:0,11,77	./.	./.	1/1:17,0:15:0.11:52,0,0	1/1:20,0:18:11.95:92,12,0	./.	1/1:27,0:25:0.47:1,0,0	1/1:9,6:15:1.25:3,1,0	0/0:13,0:11:6:0,6,51	0/1:9,0:9:15.75:20,0,16	0/0:10,0:10:5.95:0,6,43	./.	0/0:11,0:11:2.98:0,3,21	0/0:16,0:16:11.86:0,12,89	1/1:4,0:3:2.78:23,3,0	0/0:12,0:12:11.53:0,12,72	1/1:10,0:8:5.96:43,6,0	0/1:17,0:17:0:0,0,0	1/1:10,0:9:2.99:23,3,0	./.	0/1:13,0:13:20.86:21,0,41	1/1:8,0:7:2.22:7,2,0	0/0:15,0:14:8.96:0,9,69	0/0:12,0:10:0.91:0,1,32	1/1:23,1:22:8.10:71,8,0	1/1:13,0:13:8.92:64,9,0	1/1:2,1:3:2.90:16,3,0
chr10	100407045	.	AGAG	A	3507.15	PASS	AB=0.851;AC=43;AF=0.827;AN=52;BaseQRankSum=-3.280;DP=450;FS=25.199;HRun=0;HaplotypeScore=83.0678;InbreedingCoeff=0.3893;MQ=48.36;MQ0=71;MQRankSum=1.387;QD=9.88;ReadPosRankSum=1.220;VQSLOD=1.5144;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:18:11.31:18,0,11	1/1:8,0:5:8.98:95,9,0	0/1:38,0:14:4.58:5,0,315	0/0:51,0:16:35.61:0,36,394	./.	1/1:22,0:20:7.23:129,7,0	1/1:14,0:10:8.70:84,9,0	1/1:21,0:20:53.04:575,53,0	1/1:14,0:13:8.78:71,9,0	1/1:17,0:6:18.05:221,18,0	1/1:18,0:11:8.87:114,9,0	1/1:9,0:7:3.01:38,3,0	1/1:9,0:7:5.68:28,6,0	1/1:11,0:8:12.04:163,12,0	0/1:3,13:13:0:0,0,0	1/1:11,0:9:14.54:115,15,0	1/1:4,11:12:3.01:35,3,0	1/1:10,0:9:18.71:149,19,0	1/1:20,0:18:38.06:432,38,0	1/1:7,0:5:8.85:77,9,0	0/0:10,0:5:2.04:0,2,6	0/0:3,13:15:0.47:0,0,1	1/1:12,0:7:12.04:164,12,0	1/1:11,0:8:21.07:313,21,0	1/1:18,0:8:6.02:76,6,0	1/1:22,0:22:38.38:592,38,0	1/1:9,0:9:4.15:14,4,0	./.
chr10	100407047	.	AG	A	3821.39	PASS	AB=0.974;AC=43;AF=0.860;AN=50;BaseQRankSum=-2.902;DP=441;FS=22.414;HRun=2;HaplotypeScore=75.0324;InbreedingCoeff=0.4442;MQ=48.82;MQ0=68;MQRankSum=0.793;QD=11.41;ReadPosRankSum=1.740;VQSLOD=0.6331;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,5:18:4.82:48,5,0	1/1:0,8:5:8.92:93,9,0	0/1:37,1:14:5.19:5,0,314	0/0:51,0:16:35.82:0,36,395	./.	1/1:12,11:21:10.68:184,11,0	1/1:9,5:10:9.02:104,9,0	1/1:5,16:20:55.70:655,56,0	1/1:8,6:13:8.60:78,9,0	1/1:12,5:6:18.06:227,18,0	1/1:3,15:11:8.92:114,9,0	1/1:2,7:7:3.01:38,3,0	1/1:8,1:7:6.02:77,6,0	1/1:2,9:8:11.81:95,12,0	./.	1/1:7,4:9:13.81:106,14,0	1/1:15,0:12:3.01:38,3,0	1/1:5,4:8:18.04:201,18,0	1/1:7,10:15:40.75:449,41,0	1/1:2,5:5:8.60:73,9,0	0/0:6,3:5:2.50:0,2,9	0/0:16,0:15:0.47:0,0,1	1/1:3,9:7:12.03:140,12,0	1/1:2,9:8:21.02:216,21,0	1/1:3,16:9:6.02:76,6,0	1/1:6,16:22:64.71:753,65,0	1/1:4,3:7:5.97:50,6,0	./.
chr10	100407048	.	G	GA	4013.90	PASS	AB=0.833;AC=42;AF=0.808;AN=52;BaseQRankSum=-4.805;DP=440;FS=46.393;HRun=1;HaplotypeScore=75.3313;InbreedingCoeff=0.3493;MQ=49.35;MQ0=67;MQRankSum=1.209;QD=11.95;ReadPosRankSum=3.276;VQSLOD=-0.2666;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,5:18:5.53:70,6,0	1/1:8,0:5:8.92:93,9,0	0/1:38,0:14:5.04:5,0,315	0/0:51,0:16:35.79:0,36,392	./.	1/1:14,8:20:5.09:205,5,0	1/1:8,5:9:9.03:126,9,0	1/1:18,3:20:58.05:740,58,0	1/1:7,6:12:3.63:65,4,0	1/1:6,12:7:21.06:253,21,0	1/1:16,1:10:8.92:115,9,0	1/1:7,2:7:3.01:38,3,0	1/1:6,6:10:5.91:54,6,0	1/1:11,0:8:5.77:46,6,0	0/0:13,2:13:0:0,0,0	0/1:6,6:10:1.04:65,0,1	1/1:14,0:11:3.01:38,3,0	1/1:7,2:9:21.07:302,21,0	1/1:12,4:14:37.67:466,38,0	1/1:8,1:7:3.65:59,4,0	0/0:5,3:5:1.55:0,2,4	0/0:15,0:14:0.47:0,0,1	1/1:9,2:6:11.07:120,11,0	1/1:11,1:9:16.30:135,16,0	1/1:19,0:9:6.02:76,6,0	1/1:16,5:22:66.21:876,66,0	1/1:3,3:6:5.98:67,6,0	./.
chr10	100407056	.	A	AT	2899.39	PASS	AB=0.703;AC=20;AF=0.370;AN=54;BaseQRankSum=4.748;DP=451;FS=29.715;HRun=0;HaplotypeScore=84.9713;InbreedingCoeff=0.4958;MQ=59.32;MQ0=47;MQRankSum=-4.891;QD=15.50;ReadPosRankSum=0.053;VQSLOD=2.3882;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,5:16:17.41:194,17,0	0/0:4,0:1:3.01:0,3,41	0/0:41,0:17:42.12:0,42,561	0/0:54,0:19:40.98:0,41,402	0/0:16,0:6:3:0,3,25	1/1:16,8:23:8.78:329,9,0	1/1:6,4:9:14.45:129,14,0	0/1:15,10:24:99:452,0,145	1/1:6,7:13:17.62:158,18,0	0/0:18,0:8:23.94:0,24,300	0/0:15,0:8:8.76:0,9,124	0/0:7,0:5:3.01:0,3,42	0/0:11,0:11:18.06:0,18,252	0/0:8,0:6:11.90:0,12,149	0/0:16,0:14:5.74:0,6,82	1/1:5,6:11:26.68:253,27,0	0/0:13,0:12:5.51:0,6,51	0/1:10,3:12:12.64:167,0,13	0/1:8,10:16:38.14:472,0,38	1/1:3,5:8:14.90:153,15,0	1/1:5,5:7:3.77:57,4,0	0/0:17,0:16:3.48:0,3,42	0/0:10,0:6:15.05:0,15,203	0/0:17,0:14:35.73:0,36,483	0/0:17,0:9:15.05:0,15,207	0/1:12,15:27:99:610,0,190	1/1:5,4:9:11.93:114,12,0	./.
chr10	100407057	.	G	GATT	5993.26	PASS	AB=0.877;AC=22;AF=0.407;AN=54;BaseQRankSum=-2.207;DP=460;FS=19.071;HRun=0;HaplotypeScore=90.5281;InbreedingCoeff=0.6810;MQ=60.34;MQ0=47;MQRankSum=-5.544;QD=30.42;ReadPosRankSum=-0.498;VQSLOD=3.1704;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,3:16:24.29:393,24,0	0/0:4,0:1:3.01:0,3,52	0/0:42,0:18:48.12:0,48,669	0/0:54,0:19:36.12:0,36,492	0/0:16,0:6:3.01:0,3,47	1/1:17,8:25:28.51:694,29,0	1/1:10,1:10:18.03:261,18,0	0/1:19,6:25:10.50:915,0,11	1/1:13,1:14:18.22:347,18,0	0/0:18,0:8:22.90:0,23,318	0/0:15,0:8:8.98:0,9,156	0/0:6,0:4:3.01:0,3,52	0/0:11,0:11:18.06:0,18,316	0/0:7,0:5:12.04:0,12,193	0/0:17,0:15:5.61:0,6,103	1/1:8,3:11:27.09:441,27,0	0/0:12,0:11:6.01:0,6,77	1/1:7,6:13:8.54:425,9,0	1/1:17,2:17:21.86:872,22,0	1/1:7,1:8:18.02:294,18,0	1/1:9,1:7:9.02:130,9,0	0/0:17,0:16:3.01:0,3,52	0/0:10,0:6:15.05:0,15,252	0/0:17,0:14:39.59:0,40,635	0/0:17,0:9:15.05:0,15,259	0/1:27,1:28:53:995,0,53	1/1:10,1:11:15.02:225,15,0	./.
chr10	100408248	.	G	GC	11715.71	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-15.399;DP=637;FS=1.696;HRun=1;HaplotypeScore=55.4375;InbreedingCoeff=0.9997;MQ=87.85;MQ0=0;MQRankSum=-2.249;QD=38.16;ReadPosRankSum=-0.153;VQSLOD=5.1090;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:78.20:1140,78,0	0/0:14,0:14:42.14:0,42,545	0/0:27,0:27:66.17:0,66,789	0/0:17,0:17:48.08:0,48,553	0/0:28,0:28:78.25:0,78,1012	1/1:1,34:35:93.32:1392,93,0	1/1:0,16:16:42.14:629,42,0	1/1:2,32:34:96.22:1262,96,0	1/1:1,21:22:57.19:852,57,0	0/0:24,0:24:69.20:0,69,862	0/0:36,0:36:99:0,105,1324	0/0:19,0:19:57.19:0,57,739	0/0:23,0:23:63.20:0,63,805	0/0:14,0:14:39.11:0,39,492	0/0:17,0:16:48.16:0,48,622	1/1:0,12:12:30.10:449,30,0	0/0:20,0:20:60.16:0,60,746	1/1:2,20:22:65.88:926,66,0	1/1:2,17:19:51.17:746,51,0	1/1:0,32:32:90.10:1266,90,0	1/1:0,14:14:30.10:449,30,0	0/0:29,0:29:84.24:0,84,1042	0/0:27,0:27:78.25:0,78,1011	0/0:20,0:20:60.20:0,60,778	0/0:15,0:15:45.11:0,45,541	1/1:0,25:25:75.19:1040,75,0	1/1:0,29:29:75.25:1119,75,0	1/1:1,14:15:28.33:446,28,0
chr10	100408496	.	A	AGG	8500.36	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-10.717;DP=541;FS=9.513;HRun=7;HaplotypeScore=61.7265;InbreedingCoeff=0.9532;MQ=83.60;MQ0=0;MQRankSum=-1.954;QD=31.96;ReadPosRankSum=-0.366;VQSLOD=3.7927;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:30:30.05:289,30,0	0/0:4,0:4:12.04:0,12,140	0/0:23,0:23:41.16:0,41,594	0/0:16,0:14:1.63:0,2,160	0/0:23,0:23:54.14:0,54,629	1/1:6,23:30:69.71:1134,70,0	1/1:1,23:24:57.19:936,57,0	1/1:11,18:29:54.18:877,54,0	1/1:3,14:17:42.14:687,42,0	0/0:13,0:13:30.08:0,30,349	0/0:30,0:30:81.24:0,81,944	0/0:20,0:20:54.13:0,54,608	0/0:20,0:20:45.10:0,45,514	0/0:13,0:13:33.08:0,33,374	0/0:22,0:22:63.16:0,63,722	1/1:1,17:19:41.63:646,42,0	0/0:36,0:35:99:0,102,1189	1/1:2,13:15:40.38:643,40,0	1/1:4,19:24:59.69:944,60,0	1/1:4,10:14:24.08:392,24,0	1/1:1,16:18:36.12:590,36,0	0/0:17,0:17:45.13:0,45,524	0/0:16,0:16:39.09:0,39,432	0/0:9,0:9:21.05:0,21,245	0/0:13,0:13:36.06:0,36,404	1/1:4,14:18:7.16:574,7,0	1/1:2,11:14:27.09:443,27,0	1/1:1,13:14:21.07:344,21,0
chr10	100408660	.	A	AC	8314.87	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=5.905;DP=605;FS=1.426;HRun=6;HaplotypeScore=64.0142;InbreedingCoeff=0.9987;MQ=76.72;MQ0=0;MQRankSum=-2.045;QD=28.19;ReadPosRankSum=0.839;VQSLOD=5.4382;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,30:36:69.22:867,69,0	0/0:10,0:10:30.07:0,30,306	0/0:17,0:17:26.84:0,27,245	0/0:15,0:15:24.82:0,25,235	0/0:29,0:29:81.15:0,81,814	1/1:2,20:23:57.17:705,57,0	1/1:5,13:18:36.12:453,36,0	1/1:10,29:40:90.10:1037,90,0	1/1:1,15:16:36.12:453,36,0	0/0:21,0:21:57.13:0,57,581	0/0:30,0:30:87.17:0,87,870	0/0:26,0:26:63.09:0,63,617	0/0:15,0:15:45.09:0,45,452	0/0:16,0:16:33.07:0,33,336	0/0:23,0:23:54.10:0,54,544	1/1:0,18:18:48.15:604,48,0	0/0:19,0:19:54.10:0,54,543	1/1:3,11:14:27.09:339,27,0	1/1:6,16:22:48.13:584,48,0	1/1:3,28:32:84.13:1008,84,0	1/1:1,9:10:24.08:302,24,0	0/0:33,0:33:96.19:0,96,964	0/0:24,0:24:72.14:0,72,726	0/0:9,0:9:24.04:0,24,238	0/0:23,0:23:66.14:0,66,667	1/1:3,22:25:41.59:810,42,0	1/1:1,15:16:36.12:453,36,0	1/1:2,23:25:57.15:700,57,0
chr10	100409288	.	A	AT	1150.62	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.238;DP=639;FS=6.808;HRun=6;HaplotypeScore=86.8594;InbreedingCoeff=0.8807;MQ=69.04;MQ0=0;MQRankSum=1.098;QD=31.96;ReadPosRankSum=0.536;VQSLOD=3.7492;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,33:36:99:1245,99,0	0/0:3,0:3:9.02:0,9,92	0/0:10,0:10:7.94:0,8,178	0/0:9,0:9:21.04:0,21,207	0/0:43,0:43:99:0,120,1223	0/0:26,0:26:72.16:0,72,735	0/0:20,0:20:57.11:0,57,574	0/0:34,0:34:87.18:0,87,883	0/0:25,0:25:72.15:0,72,728	0/0:35,0:35:96.21:0,96,975	0/0:22,0:22:63.14:0,63,642	0/0:23,0:23:66.11:0,66,662	0/0:15,0:15:39.07:0,39,390	0/0:15,0:15:39.08:0,39,398	0/0:28,0:28:78.15:0,78,787	0/0:21,0:21:60.14:0,60,612	0/0:22,0:22:63.14:0,63,642	0/0:17,0:17:51.08:0,51,509	0/0:23,0:22:63.14:0,63,643	0/0:34,0:34:96.21:0,96,979	0/0:23,0:23:66.15:0,66,673	0/0:14,0:14:42.10:0,42,428	0/0:14,0:14:36.08:0,36,367	0/0:14,0:14:33.01:0,33,317	0/0:30,0:30:81.18:0,81,826	0/0:26,0:26:75.17:0,75,765	0/0:33,0:33:93.21:0,93,948	0/0:24,0:24:69.16:0,69,704
chr10	100409606	.	CCT	C	2252.39	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=11.628;DP=571;FS=4.532;HRun=0;HaplotypeScore=111.9338;InbreedingCoeff=0.8816;MQ=73.93;MQ0=26;MQRankSum=-1.912;QD=9.19;ReadPosRankSum=0.864;VQSLOD=3.4088;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:29:2.57:25,3,0	0/0:4,0:4:12.03:0,12,165	0/0:43,0:30:62.91:0,63,549	0/0:41,0:20:40.12:0,40,426	0/0:28,0:27:71.55:0,72,825	1/1:14,0:13:10.82:79,11,0	1/1:25,0:25:25.70:202,26,0	1/1:10,9:18:39.86:311,40,0	1/1:14,0:14:23.66:181,24,0	0/0:24,0:22:63.14:0,63,743	0/0:12,0:12:21.50:0,21,267	0/0:22,0:20:49.90:0,50,506	0/0:23,0:23:56.78:0,57,537	0/0:22,0:20:47.16:0,47,501	0/0:23,0:22:42.19:0,42,482	1/1:28,0:26:37.83:333,38,0	0/0:20,0:19:49.39:0,49,554	0/1:14,0:12:39.51:60,0,40	1/1:15,0:15:34.58:268,35,0	1/1:21,0:20:13.12:220,13,0	1/1:24,0:24:37.76:301,38,0	0/0:13,0:13:24.48:0,24,268	0/0:11,0:11:27.04:0,27,326	0/0:27,0:27:66.37:0,66,660	0/0:13,0:12:27.45:0,27,306	1/1:13,0:13:14.09:124,14,0	1/1:19,1:18:31.96:252,32,0	1/1:7,0:7:14.47:119,14,0
chr10	100409607	.	CTCTGTGTGTG	C	1029.91	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=4.783;DP=578;FS=16.407;HRun=0;HaplotypeScore=185.5967;InbreedingCoeff=-0.1766;MQ=72.51;MQ0=28;MQRankSum=-3.824;QD=4.48;ReadPosRankSum=-4.732;VQSLOD=0.1436;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:29:2.31:42,2,0	0/0:4,0:4:12.03:0,12,453	0/0:42,0:29:65.12:0,65,732	0/0:41,0:20:40.28:0,40,744	0/0:29,0:28:72.57:0,73,2212	0/0:14,0:13:3.36:0,3,629	0/1:25,0:25:63.73:64,0,681	0/1:19,0:18:99:174,0,478	0/1:14,0:14:90.62:91,0,459	0/0:24,0:22:63.16:0,63,1568	0/0:12,0:12:24.07:0,24,929	0/0:24,0:22:53.09:0,53,1380	0/0:21,0:21:60.48:0,60,1043	0/0:22,0:20:51.08:0,51,1395	0/0:23,0:21:51.06:0,51,1310	0/1:29,0:27:99:194,0,995	0/0:21,0:20:57.03:0,57,1532	0/1:13,0:11:36.63:37,0,284	0/1:15,0:15:99:131,0,202	0/1:20,0:19:96.34:96,0,532	0/1:24,0:24:99:101,0,481	0/0:16,0:16:27.03:0,27,707	0/0:12,0:12:27.05:0,27,897	0/0:29,0:28:68.94:0,69,1361	0/0:14,0:13:30.06:0,30,907	0/1:13,0:13:68.62:69,0,459	0/1:20,0:18:81.59:82,0,866	0/1:7,0:7:82.91:102,0,83
chr10	100411214	.	T	TTGTGTGTGTGTGTGTG	6457.58	PASS	AB=0.981;AC=28;AF=0.500;AN=56;BaseQRankSum=6.320;DP=655;FS=3.224;HRun=0;HaplotypeScore=249.7494;InbreedingCoeff=0.6604;MQ=62.30;MQ0=14;MQRankSum=-6.168;QD=17.31;ReadPosRankSum=-5.125;VQSLOD=2.9240;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:14.17:101,14,0	0/0:8,0:9:24.04:0,24,590	0/1:53,0:19:6.02:6,0,49	0/1:32,0:12:8.06:8,0,50	0/0:29,0:29:71.95:0,72,2288	1/1:9,1:23:8.27:623,8,0	1/1:27,0:27:29.92:419,30,0	1/1:37,0:36:72.10:1231,72,0	1/1:17,0:17:18.03:427,18,0	0/0:25,0:25:51.14:0,51,1603	0/0:38,0:39:98.74:0,99,2924	0/0:23,0:23:57.15:0,57,1984	0/0:18,0:18:30.11:0,30,1355	0/0:17,0:17:36.15:0,36,1404	0/0:27,0:27:54.09:0,54,1746	1/1:4,9:14:3.48:227,3,0	0/1:27,0:27:32.11:32,0,2207	0/1:11,0:12:99:181,0,137	1/1:10,0:10:22.82:152,23,0	1/1:9,11:23:6.02:450,6,0	1/1:19,0:19:26.94:414,27,0	0/0:17,0:18:48.09:0,48,1437	0/0:28,0:27:38.23:0,38,2002	0/0:20,0:20:41.11:0,41,1700	0/0:28,0:29:66.17:0,66,2421	1/1:21,0:21:47.98:1197,48,0	1/1:4,17:22:13.86:763,14,0	1/1:2,7:9:3.01:227,3,0
chr10	100411726	.	A	AT	10658.84	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-17.000;DP=591;FS=0.991;HRun=4;HaplotypeScore=54.0643;InbreedingCoeff=0.9971;MQ=84.22;MQ0=0;MQRankSum=-3.488;QD=35.53;ReadPosRankSum=0.654;VQSLOD=5.0991;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:45.15:616,45,0	0/0:5,0:5:15.04:0,15,170	0/0:21,0:21:57.16:0,57,641	0/0:14,0:14:42.12:0,42,472	0/0:35,0:35:96.26:0,96,1079	1/1:3,25:28:66.22:903,66,0	1/1:1,25:26:75.25:1026,75,0	1/1:2,28:30:84.22:1087,84,0	1/1:1,24:25:69.23:944,69,0	0/0:18,0:18:54.15:0,54,613	0/0:21,0:21:60.17:0,60,676	0/0:16,0:16:45.13:0,45,510	0/0:18,0:18:48.14:0,48,544	0/0:20,0:20:54.15:0,54,612	0/0:26,0:26:75.21:0,75,851	1/1:1,14:15:39.13:534,39,0	0/0:14,0:14:36.10:0,36,402	1/1:2,18:20:21.39:666,21,0	1/1:4,22:26:66.20:885,66,0	1/1:4,25:29:78.21:1040,78,0	1/1:1,19:20:57.19:780,57,0	0/0:22,0:22:60.14:0,60,668	0/0:25,0:25:75.19:0,75,839	0/0:19,0:19:54.12:0,54,591	0/0:17,0:17:51.15:0,51,578	1/1:3,25:28:41.21:947,41,0	1/1:1,26:27:63.21:862,63,0	1/1:0,9:9:27.09:369,27,0
chr10	100413183	.	TGGGGG	T	11230.61	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=10.889;DP=569;FS=6.118;HRun=11;HaplotypeScore=131.5367;InbreedingCoeff=0.9787;MQ=65.53;MQ0=0;MQRankSum=-15.071;QD=39.41;ReadPosRankSum=7.477;VQSLOD=2.4634;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:29:57.16:1029,57,0	0/0:6,0:7:18.05:0,18,419	0/0:19,0:18:45.12:0,45,987	0/0:18,0:17:35.90:0,36,706	0/0:21,0:24:42.11:0,42,946	1/1:4,26:30:60.19:1091,60,0	1/1:5,13:18:30.07:543,30,0	1/1:5,28:33:81.18:1396,81,0	1/1:3,13:16:36.11:654,36,0	0/0:18,0:19:12.04:0,12,260	0/0:11,0:13:21.07:0,21,507	0/0:21,0:21:39.10:0,39,891	0/0:15,0:17:42.08:0,42,920	0/0:19,0:22:38.48:0,38,901	0/0:17,0:21:32.65:0,33,677	1/1:1,17:18:42.14:763,42,0	0/0:26,0:30:66.23:0,66,1653	1/1:1,14:15:27.09:491,27,0	1/1:6,19:24:51.12:927,51,0	1/1:3,21:24:57.16:1034,57,0	1/1:3,16:19:33.11:580,33,0	0/0:12,0:16:30.06:0,30,679	0/0:18,0:19:21.07:0,21,574	0/0:18,0:18:33.09:0,33,806	0/0:14,0:16:30.10:0,30,745	1/1:4,24:28:72.24:1308,72,0	1/1:1,27:28:72.24:1306,72,0	1/1:0,2:2:6.02:109,6,0
chr10	100414691	.	TA	T	6998.27	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=9.653;DP=539;FS=24.548;HRun=7;HaplotypeScore=54.2546;InbreedingCoeff=0.9984;MQ=80.88;MQ0=0;MQRankSum=-7.499;QD=25.73;ReadPosRankSum=2.143;VQSLOD=3.2018;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,47:49:99:1255,123,0	0/0:6,0:6:18.06:0,18,226	0/0:20,0:20:47.18:0,47,563	0/0:23,0:22:52.49:0,52,581	0/0:19,0:19:54.17:0,54,679	1/1:3,19:22:54.12:550,54,0	1/1:2,16:18:42.09:429,42,0	1/1:2,33:35:99:1002,99,0	1/1:3,11:14:27.06:275,27,0	0/0:26,0:26:72.22:0,72,896	0/0:18,0:18:48.15:0,48,596	0/0:18,0:18:45.13:0,45,554	0/0:23,0:23:66.20:0,66,817	0/0:19,0:19:54.15:0,54,655	0/0:15,0:15:42.13:0,42,528	1/1:5,14:19:33.07:337,33,0	0/0:24,0:24:66.20:0,66,817	1/1:2,18:20:54.12:551,54,0	1/1:2,18:20:51.11:520,51,0	1/1:1,17:18:48.10:489,48,0	1/1:0,18:18:48.11:490,48,0	0/0:13,0:13:36.12:0,36,453	0/0:11,0:11:30.10:0,30,377	0/0:15,0:15:36.08:0,36,425	0/0:17,0:17:45.11:0,45,537	1/1:1,18:19:51.11:520,51,0	1/1:0,11:11:30.07:306,30,0	1/1:0,9:9:27.06:275,27,0
chr10	100420382	.	GA	G	6565.49	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=11.150;DP=511;FS=9.440;HRun=7;HaplotypeScore=50.4021;InbreedingCoeff=0.9888;MQ=80.31;MQ0=0;MQRankSum=-3.310;QD=27.59;ReadPosRankSum=-0.662;VQSLOD=4.8574;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:42.10:429,42,0	0/0:15,0:15:42.13:0,42,528	0/0:15,0:15:33.10:0,33,410	0/0:10,0:10:24.06:0,24,271	0/0:35,0:35:99:0,99,1214	1/1:3,16:19:45.09:459,45,0	1/1:2,14:16:42.09:429,42,0	1/1:3,37:40:99:1125,111,0	1/1:0,13:13:39.09:398,39,0	0/0:23,0:23:66.21:0,66,830	0/0:27,0:27:75.23:0,75,931	0/0:16,0:16:42.13:0,42,528	0/0:13,0:13:36.10:0,36,439	0/0:17,0:17:51.16:0,51,641	0/0:20,0:20:54.17:0,54,679	1/1:0,13:13:33.08:337,33,0	0/0:15,0:15:45.14:0,45,566	1/1:0,3:3:9.02:92,9,0	1/1:0,15:15:45.10:459,45,0	1/1:1,23:24:69.16:704,69,0	1/1:0,7:7:21.05:214,21,0	0/0:16,0:16:45.14:0,45,566	0/0:24,0:24:54.17:0,54,679	0/0:5,0:5:15.05:0,15,189	0/0:22,0:22:60.17:0,60,732	1/1:2,24:26:34.42:666,34,0	1/1:2,31:33:84.09:857,84,0	1/1:0,13:13:39.09:398,39,0
chr10	100421027	.	TTGTTA	T	11393.92	PASS	AB=0.514;AC=25;AF=0.446;AN=56;BaseQRankSum=17.144;DP=572;FS=1.455;HRun=0;HaplotypeScore=121.8985;InbreedingCoeff=0.9213;MQ=82.63;MQ0=0;MQRankSum=-16.387;QD=52.03;ReadPosRankSum=-0.337;VQSLOD=5.2419;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:66.23:1355,66,0	0/0:10,0:10:30.10:0,30,929	0/0:20,0:20:57.20:0,57,1696	0/0:25,0:25:57.01:0,57,1614	0/0:36,0:36:99:0,99,3043	1/1:1,21:21:54.19:1132,54,0	1/1:1,7:8:24.04:441,24,0	1/1:4,29:33:87.25:1676,87,0	1/1:2,18:20:45.15:944,45,0	0/0:37,0:37:99:0,102,3129	0/0:24,0:24:69.24:0,69,2089	0/0:20,0:20:60.21:0,60,1860	0/0:27,0:27:81.24:0,81,2351	0/0:27,0:27:78.25:0,78,2343	0/0:33,0:33:96.30:0,96,2834	1/1:0,17:17:48.16:1007,48,0	0/0:20,0:20:60.21:0,60,1859	1/1:3,4:7:12.03:215,12,0	1/1:2,13:15:39.13:800,39,0	1/1:0,20:20:54.19:1126,54,0	1/1:0,8:8:18.02:334,18,0	0/0:23,0:23:66.23:0,66,2039	0/0:22,0:22:63.22:0,63,1899	0/0:12,0:12:30.10:0,30,929	0/0:17,0:17:51.16:0,51,1513	0/1:1,17:18:38.88:979,0,39	1/1:1,15:16:45.15:944,45,0	1/1:0,9:9:21.07:441,21,0
chr10	100421068	.	A	ACCC	5069.29	PASS	AB=0.667;AC=23;AF=0.411;AN=56;BaseQRankSum=2.022;DP=544;FS=15.859;HRun=8;HaplotypeScore=110.7270;InbreedingCoeff=0.9295;MQ=86.39;MQ0=0;MQRankSum=-10.905;QD=29.30;ReadPosRankSum=-1.567;VQSLOD=1.8128;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:75.19:0,75,970	0/0:8,0:8:24.06:0,24,301	0/0:23,0:23:45.07:0,45,567	0/0:25,0:26:52.73:0,53,696	0/0:33,0:33:90.29:0,90,1182	1/1:9,7:16:30.08:561,30,0	1/1:5,8:14:23.72:438,24,0	1/1:18,6:25:24.07:431,24,0	1/1:7,4:11:18.06:345,18,0	0/0:34,0:34:88.78:0,89,1116	0/0:24,0:24:66.18:0,66,850	0/0:19,0:19:48.11:0,48,600	0/0:21,0:21:63.20:0,63,827	0/0:23,0:23:69.22:0,69,906	0/0:32,0:32:93.24:0,93,1188	1/1:5,8:13:27.09:530,27,0	0/0:19,0:19:57.19:0,57,749	1/1:3,8:12:21.52:388,22,0	1/1:10,4:15:15.05:300,15,0	1/1:8,4:14:24.05:404,24,0	1/1:5,3:10:11.63:184,12,0	0/0:24,0:24:66.20:0,66,865	0/0:22,0:22:60.18:0,60,780	0/0:11,0:11:30.08:0,30,393	0/0:20,0:20:54.12:0,54,690	0/1:9,9:18:6.33:521,0,6	1/1:5,10:16:33.08:627,33,0	1/1:5,3:9:21.05:340,21,0
chr10	100422070	.	T	TACCC	669.57	PASS	AB=0.750;AC=15;AF=0.326;AN=46;BaseQRankSum=0.111;DP=385;FS=9.889;HRun=0;HaplotypeScore=71.9923;InbreedingCoeff=0.7136;MQ=93.79;MQ0=0;MQRankSum=-1.428;QD=15.57;ReadPosRankSum=-1.176;VQSLOD=1.7308;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,1:5:3.01:75,3,0	0/0:11,0:11:30.10:0,30,512	0/0:29,0:29:36.23:0,36,644	0/0:22,0:22:40.66:0,41,613	0/0:29,0:29:66.18:0,66,1046	1/1:4,1:4:3.01:75,3,0	1/1:4,0:4:3:25,3,0	1/1:10,0:10:12:146,12,0	1/1:2,2:5:6.02:150,6,0	0/0:21,0:21:51.15:0,51,797	0/0:14,0:14:27.09:0,27,457	0/0:22,0:22:57.16:0,57,918	0/0:21,0:21:54.17:0,54,889	0/0:34,0:34:93.32:0,93,1585	0/0:21,0:21:57.19:0,57,968	./.	0/0:23,0:22:60.18:0,60,984	1/1:4,0:4:3:25,3,0	./.	1/1:2,2:4:9.03:187,9,0	0/1:4,2:6:42.13:141,0,42	0/0:20,0:20:54.17:0,54,887	0/0:16,0:16:42.13:0,42,688	0/0:33,0:33:84.24:0,84,1389	0/0:16,0:16:42.14:0,42,713	./.	./.	./.
chr10	100422475	.	C	CT	7753.63	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-13.947;DP=571;FS=2.299;HRun=7;HaplotypeScore=50.5569;InbreedingCoeff=0.9766;MQ=77.97;MQ0=0;MQRankSum=-0.853;QD=28.61;ReadPosRankSum=-0.989;VQSLOD=5.0731;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:18:46.10:240,46,0	0/0:15,0:15:42.01:0,42,387	0/0:9,0:9:3.20:0,3,103	0/0:16,0:16:40.61:0,41,377	0/0:34,0:34:90.13:0,90,869	1/1:1,22:23:63.19:761,63,0	1/1:1,13:14:36.11:435,36,0	1/1:9,19:28:57.17:689,57,0	1/1:2,16:18:39.11:462,39,0	0/0:30,0:30:81.11:0,81,779	0/0:21,0:21:60.09:0,60,579	0/0:19,0:19:42.05:0,42,406	0/0:13,0:13:33.05:0,33,319	0/0:21,0:21:60.08:0,60,574	0/0:22,0:22:63.10:0,63,608	1/1:0,14:14:42.13:507,42,0	0/0:13,0:13:36:0,36,328	1/1:1,14:15:36.11:435,36,0	1/1:7,19:26:57.17:688,57,0	1/1:2,20:22:60.14:707,60,0	1/1:4,16:21:45:522,45,0	0/0:31,0:31:93.14:0,93,894	0/0:19,0:19:45.06:0,45,435	0/0:13,0:13:33.05:0,33,319	0/0:24,0:24:72.09:0,72,688	1/1:1,30:31:90.26:1076,90,0	1/1:4,25:28:72.22:870,72,0	1/1:2,10:12:30.09:362,30,0
chr10	100423200	.	C	CATT	5132.55	PASS	AB=0.644;AC=22;AF=0.393;AN=56;BaseQRankSum=13.115;DP=433;FS=81.289;HRun=0;HaplotypeScore=125.4066;InbreedingCoeff=0.8522;MQ=89.02;MQ0=0;MQRankSum=-12.720;QD=40.10;ReadPosRankSum=2.334;VQSLOD=2.2034;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.24:0,96,1660	0/0:8,0:8:24.08:0,24,447	0/0:26,0:24:69.16:0,69,1269	0/0:24,0:21:51.17:0,51,900	0/0:23,0:23:63.18:0,63,1108	1/1:1,17:18:54.18:925,54,0	1/1:1,5:6:15.05:251,15,0	0/1:7,11:18:1.86:577,0,2	1/1:0,8:8:24.08:420,24,0	0/0:32,0:32:96.33:0,96,1754	0/0:10,0:10:30.10:0,30,559	0/0:12,0:12:36.11:0,36,640	0/0:18,0:18:54.12:0,54,927	0/0:15,0:15:45.11:0,45,803	0/0:19,0:19:54.17:0,54,970	1/1:4,14:18:38.30:767,38,0	0/0:20,0:19:54.19:0,54,1000	1/1:1,8:9:24.08:398,24,0	0/1:3,3:6:1.23:162,0,1	1/1:2,8:10:30.06:473,30,0	1/1:4,3:7:9.92:143,10,0	0/0:21,0:21:63.21:0,63,1141	0/0:11,0:11:33.10:0,33,584	0/0:19,0:19:46.04:0,46,841	0/0:11,0:11:33.11:0,33,615	1/1:5,5:10:0.67:250,1,0	1/1:3,13:16:40.69:660,41,0	1/1:0,2:2:6.02:106,6,0
chr10	100423241	.	C	CT	3830.70	PASS	AB=0.615;AC=16;AF=0.286;AN=56;BaseQRankSum=10.346;DP=450;FS=43.356;HRun=1;HaplotypeScore=113.9914;InbreedingCoeff=0.0400;MQ=59.96;MQ0=14;MQRankSum=-9.400;QD=20.71;ReadPosRankSum=4.081;VQSLOD=1.2689;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,21:30:99:597,0,102	0/0:7,0:7:11.81:0,12,154	0/0:28,0:12:24.04:0,24,281	0/0:30,1:12:14.43:0,14,153	0/0:22,0:22:24.49:0,24,334	0/1:5,9:14:92.27:337,0,92	0/1:9,6:14:99:111,0,102	0/1:5,13:18:99:486,0,119	0/1:1,7:8:5.60:247,0,6	0/0:21,0:20:57.05:0,57,748	0/0:10,0:10:14.81:0,15,210	0/0:13,0:13:35.87:0,36,474	0/0:8,0:8:24.07:0,24,313	0/0:17,0:16:22.41:0,22,377	0/0:26,0:25:44.76:0,45,527	0/1:6,8:14:86.39:269,0,86	0/0:23,0:21:38.49:0,38,579	0/1:2,2:4:14.23:39,0,14	0/1:5,8:12:84.70:321,0,85	1/1:6,9:15:1.38:361,1,0	1/1:7,4:10:11.20:136,11,0	0/0:23,0:23:40.50:0,41,565	0/0:10,0:10:24.03:0,24,290	0/0:19,0:19:29.42:0,29,438	0/0:7,0:7:13.05:0,13,171	0/1:11,12:21:99:428,0,154	0/1:3,12:15:44.03:455,0,44	1/1:4,1:3:2.42:44,2,0
chr10	100423243	.	C	CTCT	3835.65	PASS	AB=0.851;AC=13;AF=0.232;AN=56;BaseQRankSum=9.296;DP=441;FS=24.264;HRun=0;HaplotypeScore=125.8988;InbreedingCoeff=-0.2248;MQ=58.79;MQ0=14;MQRankSum=-6.565;QD=20.73;ReadPosRankSum=5.999;VQSLOD=1.7962;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,10:29:99:642,0,136	0/0:7,0:7:16.30:0,16,208	0/0:26,0:11:12.03:0,12,156	0/0:30,0:11:5.96:0,6,133	0/0:23,0:23:18.50:0,19,213	0/1:11,3:14:99:327,0,130	0/1:12,2:14:99:185,0,141	0/1:17,1:18:99:450,0,112	0/1:7,1:8:7.95:286,0,8	0/0:21,0:20:42.03:0,42,574	0/0:10,0:10:16.28:0,16,222	0/0:12,0:12:34.65:0,35,492	0/0:7,0:7:12.64:0,13,292	0/0:15,0:14:27.60:0,28,416	0/0:23,0:23:48.58:0,49,641	0/1:10,3:14:99:372,0,150	0/0:23,0:21:47.76:0,48,717	0/1:3,1:4:26.71:45,0,27	0/1:12,1:12:99:271,0,132	0/1:14,2:16:23.26:230,0,23	0/1:9,2:10:14.84:48,0,15	0/0:22,0:22:42.04:0,42,523	0/0:10,0:10:20.28:0,20,283	0/0:18,0:18:32.52:0,33,490	0/0:7,0:7:11.16:0,11,153	0/1:17,6:21:99:635,0,188	0/1:11,4:15:45.24:298,0,45	0/1:5,0:3:1.78:46,0,2
chr10	100423246	.	TCCC	T	2452.94	PASS	AB=0.763;AC=12;AF=0.214;AN=56;BaseQRankSum=8.441;DP=422;FS=4.887;HRun=3;HaplotypeScore=112.7970;InbreedingCoeff=-0.2255;MQ=58.45;MQ0=14;MQRankSum=-5.564;QD=14.87;ReadPosRankSum=2.264;VQSLOD=0.5609;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:20,9:29:99:361,0,439	0/0:7,0:7:16.48:0,16,228	0/0:25,0:9:12.03:0,12,156	0/0:30,0:11:6.82:0,7,135	0/0:21,0:21:20.71:0,21,218	0/1:8,5:13:99:197,0,300	0/1:12,1:12:78.12:78,0,350	0/1:7,9:16:99:393,0,321	0/1:3,5:8:44.06:266,0,44	0/0:18,0:17:44.99:0,45,657	0/0:10,0:10:19.66:0,20,235	0/0:12,0:12:35.32:0,35,520	0/0:7,0:7:21.07:0,21,392	0/0:16,0:15:30.60:0,31,585	0/0:24,0:23:51.12:0,51,787	0/1:10,4:14:99:246,0,306	0/0:23,0:21:50.08:0,50,805	0/1:3,0:3:43.64:44,0,68	0/1:7,5:11:99:214,0,212	0/1:9,6:15:52.04:228,0,52	0/0:9,1:9:7.72:0,8,91	0/0:21,0:21:45.47:0,45,675	0/0:8,0:8:20.28:0,20,395	0/0:19,0:19:34.86:0,35,578	0/0:6,0:6:12.88:0,13,209	0/1:17,6:21:99:300,0,520	0/1:7,7:14:99:230,0,187	0/1:4,1:3:2.56:46,0,3
chr10	100423326	.	T	TC	1358.32	PASS	AC=24;AF=0.462;AN=52;BaseQRankSum=-2.990;DP=180;FS=31.549;HRun=6;HaplotypeScore=36.4910;InbreedingCoeff=0.6768;MQ=67.92;MQ0=0;MQRankSum=-1.145;QD=19.98;ReadPosRankSum=2.146;VQSLOD=1.6493;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:18.06:223,18,0	0/0:3,0:3:9.02:0,9,90	0/0:6,1:6:3.03:0,3,80	0/0:4,0:4:8.58:0,9,60	0/0:7,0:7:1.18:0,1,27	1/1:0,5:4:9.03:109,9,0	1/1:0,12:12:9.03:110,9,0	1/1:0,5:5:15.05:188,15,0	1/1:2,4:6:8.39:80,8,0	0/0:10,0:10:8.23:0,8,187	0/0:9,0:9:12:0,12,109	./.	0/0:10,0:10:9:0,9,85	0/0:10,0:10:6.19:0,6,67	0/0:8,0:8:13.83:0,14,122	1/1:2,5:7:9.01:92,9,0	0/0:7,0:6:5.67:0,6,57	1/1:0,2:2:6.02:73,6,0	1/1:0,2:2:6.02:76,6,0	./.	1/1:1,2:3:3.01:38,3,0	0/0:8,0:9:9.01:0,9,88	0/0:4,0:4:6.01:0,6,57	0/0:8,0:8:8.81:0,9,74	0/0:6,0:6:3.01:0,3,30	1/1:0,11:11:33.09:402,33,0	1/1:1,4:4:9.03:113,9,0	1/1:0,1:1:3.01:38,3,0
chr10	100423509	.	G	GA	6471.02	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-12.467;DP=536;FS=0.000;HRun=8;HaplotypeScore=47.7385;InbreedingCoeff=0.9923;MQ=69.48;MQ0=0;MQRankSum=-0.752;QD=26.20;ReadPosRankSum=0.942;VQSLOD=5.3228;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:45.13:519,45,0	0/0:9,0:9:27:0,27,242	0/0:20,0:15:35.08:0,35,275	0/0:13,0:11:25.61:0,26,204	0/0:39,0:39:99:0,105,961	1/1:3,17:20:36.11:415,36,0	1/1:3,7:10:20.91:241,21,0	1/1:1,17:18:51.15:588,51,0	1/1:3,12:15:30.09:346,30,0	0/0:26,0:26:69.03:0,69,631	0/0:22,0:21:54.01:0,54,490	0/0:17,0:17:48.03:0,48,439	0/0:12,0:12:35.91:0,36,309	0/0:19,0:19:54.02:0,54,489	0/0:26,0:26:63.03:0,63,576	1/1:5,18:23:48.14:554,48,0	0/0:20,0:20:59.99:0,60,540	1/1:0,14:14:36.11:415,36,0	1/1:6,26:32:78.21:880,78,0	1/1:6,13:19:14.70:422,15,0	1/1:2,13:15:39.12:450,39,0	0/0:21,0:21:57.02:0,57,521	0/0:19,0:19:48.02:0,48,439	0/0:13,0:13:39.02:0,39,357	0/0:13,0:13:33.02:0,33,302	1/1:4,31:36:41.17:947,41,0	1/1:1,17:18:48.14:554,48,0	1/1:0,4:4:12.04:138,12,0
chr10	100425536	.	AGT	A	3579.84	PASS	AB=0.905;AC=34;AF=0.607;AN=56;BaseQRankSum=8.189;DP=703;FS=6.287;HRun=0;HaplotypeScore=100.3463;InbreedingCoeff=0.4210;MQ=67.49;MQ0=9;MQRankSum=0.380;QD=7.83;ReadPosRankSum=-1.280;VQSLOD=2.6121;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:36:5.19:21,5,0	0/1:12,1:13:0.95:1,0,427	0/0:68,0:32:6.40:0,6,51	0/0:86,0:47:3.01:0,3,38	0/0:17,0:17:27.08:0,27,388	1/1:15,5:20:18.52:203,19,0	1/1:10,13:25:35.60:348,36,0	1/1:28,3:31:23.93:197,24,0	1/1:8,7:17:29.64:290,30,0	0/1:21,2:23:24.89:25,0,434	0/1:18,1:20:6.09:6,0,462	0/0:29,0:29:63.20:0,63,932	0/0:19,0:19:30.03:0,30,407	0/1:27,3:29:13.94:14,0,654	0/1:15,1:16:1.12:1,0,424	1/1:6,5:11:18.04:196,18,0	0/1:20,2:22:32:32,0,403	1/1:6,3:11:15.33:141,15,0	1/1:18,6:24:21:208,21,0	1/1:2,8:12:26.71:252,27,0	1/1:21,25:46:46.02:613,46,0	0/0:8,0:8:15.05:0,15,225	0/1:11,3:14:35:35,0,374	0/1:30,3:34:23.83:24,0,703	0/0:19,0:19:33.09:0,33,466	1/1:8,18:26:54.14:604,54,0	1/1:13,4:16:26.91:286,27,0	1/1:2,5:8:8.86:82,9,0
chr10	100426421	.	C	CCTA	15094.27	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=15.342;DP=651;FS=2.592;HRun=0;HaplotypeScore=116.0331;InbreedingCoeff=0.9649;MQ=82.96;MQ0=0;MQRankSum=-14.360;QD=57.18;ReadPosRankSum=2.155;VQSLOD=6.9281;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,26:34:81.28:1855,81,0	0/0:10,0:10:23.98:0,24,423	0/0:25,0:24:66.20:0,66,1066	0/0:31,0:31:73.29:0,73,1302	0/0:15,0:15:42.12:0,42,706	1/1:1,19:20:51.18:1175,51,0	1/1:2,16:21:51.18:1173,51,0	1/1:7,24:32:93.31:2016,93,0	1/1:0,25:27:66.23:1517,66,0	0/0:25,0:25:75.24:0,75,1261	0/0:20,0:20:57.17:0,57,952	0/0:30,0:30:84.24:0,84,1418	0/0:32,0:32:93.32:0,93,1635	0/0:35,0:35:99:0,102,1742	0/0:41,0:41:99:0,123,2118	1/1:0,15:15:45.15:1035,45,0	0/0:33,0:33:93.32:0,93,1629	1/1:1,7:8:21.07:484,21,0	1/1:6,13:21:63.18:1315,63,0	1/1:2,7:10:18.02:367,18,0	1/1:4,28:33:78.27:1778,78,0	0/0:34,0:34:96.32:0,96,1663	0/0:16,0:16:48.16:0,48,846	0/0:24,0:24:66.23:0,66,1164	0/0:16,0:16:45.14:0,45,765	1/1:2,17:22:1.22:1075,1,0	1/1:0,16:16:42.14:963,42,0	1/1:0,5:5:15.05:341,15,0
chr10	100426573	.	C	CT	644.52	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.856;DP=555;FS=0.000;HRun=1;HaplotypeScore=90.1268;InbreedingCoeff=0.7168;MQ=50.62;MQ0=11;MQRankSum=-2.918;QD=22.22;ReadPosRankSum=-1.560;VQSLOD=3.1642;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:51.14:739,51,0	0/0:10,0:10:30.07:0,30,369	0/0:3,0:1:3.01:0,3,38	0/0:10,0:4:12.01:0,12,138	0/0:22,0:22:51.17:0,51,661	0/0:18,0:18:48.15:0,48,618	0/0:9,0:9:18.06:0,18,233	0/0:19,0:17:41.58:0,42,494	0/0:22,0:22:32.69:0,33,400	0/0:33,0:32:96.31:0,96,1235	0/0:20,0:20:48.16:0,48,621	0/0:16,0:15:39.11:0,39,490	0/0:33,0:32:90.29:0,90,1168	0/0:28,0:28:69.22:0,69,896	0/0:33,0:33:96.27:0,96,1204	0/0:18,0:18:45.15:0,45,584	0/0:24,0:24:54.18:0,54,701	0/0:11,0:9:21.07:0,21,272	0/0:24,1:18:4.08:0,4,521	0/0:9,0:9:21.07:0,21,269	0/0:13,0:12:33.11:0,33,424	0/0:28,0:28:72.23:0,72,935	0/0:23,0:23:66.21:0,66,856	0/0:24,0:22:63.19:0,63,803	0/0:20,0:20:60.19:0,60,776	0/0:23,0:20:54.17:0,54,697	0/0:26,0:25:63.20:0,63,817	0/0:6,0:6:15.05:0,15,194
chr10	100426773	.	TG	T	6120.08	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=10.702;DP=578;FS=2.923;HRun=8;HaplotypeScore=62.1541;InbreedingCoeff=0.9973;MQ=66.65;MQ0=0;MQRankSum=-5.273;QD=22.67;ReadPosRankSum=-0.342;VQSLOD=5.2506;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:30:69.05:654,69,0	0/0:10,0:10:26.98:0,27,283	0/0:22,0:21:25.94:0,26,457	0/0:19,0:19:45.12:0,45,518	0/0:17,0:17:48.12:0,48,556	1/1:1,16:17:42.07:405,42,0	1/1:2,24:27:60.09:579,60,0	1/1:2,19:21:57.09:548,57,0	1/1:1,19:20:53.97:499,54,0	0/0:18,0:18:51.16:0,51,616	0/0:13,0:13:36.11:0,36,435	0/0:22,0:22:54.10:0,54,615	0/0:20,0:20:54.16:0,54,642	0/0:23,0:23:54.16:0,54,649	0/0:21,0:21:51.16:0,51,616	1/1:3,15:18:32.99:307,33,0	0/0:35,0:35:99:0,102,1212	1/1:0,16:16:45.07:434,45,0	1/1:3,11:14:29.99:275,30,0	1/1:1,14:15:35.99:336,36,0	1/1:4,27:31:74.99:710,75,0	0/0:21,0:21:60.17:0,60,712	0/0:15,0:15:36.10:0,36,423	0/0:35,0:35:99:0,102,1204	0/0:17,0:17:39.10:0,39,451	1/1:4,32:36:43.09:850,43,0	1/1:2,17:19:39.06:376,39,0	1/1:0,5:5:15.02:145,15,0
chr10	100426843	.	TG	T	464.59	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.925;DP=522;FS=3.882;HRun=2;HaplotypeScore=61.1134;InbreedingCoeff=0.9902;MQ=57.64;MQ0=8;MQRankSum=-0.296;QD=22.12;ReadPosRankSum=0.700;VQSLOD=3.5625;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:20:24.21:558,24,0	0/0:9,0:9:24.07:0,24,339	0/0:16,0:12:36.12:0,36,539	0/0:23,0:12:33.10:0,33,472	0/0:19,0:19:54.17:0,54,781	0/0:14,0:14:36.12:0,36,538	0/0:25,0:25:63.20:0,63,925	0/0:22,0:22:66.20:0,66,934	0/0:19,0:19:48.16:0,48,718	0/0:18,0:18:54.18:0,54,810	0/0:20,0:20:54.17:0,54,788	0/0:23,0:23:62.93:0,63,943	0/0:20,0:20:54.18:0,54,808	0/0:21,0:21:57.19:0,57,853	0/0:21,0:21:63.21:0,63,944	0/0:9,0:9:27.09:0,27,404	0/0:28,0:28:84.28:0,84,1257	0/0:8,0:8:24.07:0,24,340	0/0:15,0:12:36.12:0,36,538	0/0:14,0:14:36.04:0,36,511	0/0:15,0:15:45.10:0,45,629	0/0:20,0:20:54.17:0,54,788	0/0:14,0:14:42.13:0,42,609	0/0:23,0:23:69.22:0,69,1010	0/0:20,0:20:60.19:0,60,879	0/0:33,0:33:93.30:0,93,1357	0/0:22,0:22:51.17:0,51,763	0/0:10,0:10:24.08:0,24,360
chr10	100426899	.	TA	T	5824.37	PASS	AB=0.692;AC=24;AF=0.429;AN=56;BaseQRankSum=12.413;DP=539;FS=1.102;HRun=6;HaplotypeScore=51.0670;InbreedingCoeff=0.8584;MQ=59.15;MQ0=11;MQRankSum=0.016;QD=25.55;ReadPosRankSum=0.086;VQSLOD=4.4162;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.23:0,72,947	0/0:10,0:10:27.09:0,27,355	0/0:19,2:10:10.81:0,11,174	0/1:13,3:4:8.14:8,0,45	0/0:28,0:28:63.17:0,63,809	1/1:1,16:17:45.11:484,45,0	1/1:2,13:15:36.09:387,36,0	1/1:3,22:24:66.17:708,66,0	1/1:2,17:19:48.12:516,48,0	0/0:21,0:21:63.18:0,63,793	0/0:26,0:26:75.24:0,75,982	0/0:22,0:22:66.21:0,66,866	0/0:13,0:13:36.12:0,36,474	0/0:13,0:13:36.11:0,36,460	0/0:15,0:15:45.13:0,45,565	1/1:0,12:12:36.09:387,36,0	0/0:34,0:33:96.31:0,96,1259	0/1:1,7:8:18.42:172,0,18	1/1:3,13:15:39.06:406,39,0	1/1:2,20:22:60.14:638,60,0	1/1:1,11:12:33.08:354,33,0	0/0:14,0:14:33.11:0,33,434	0/0:18,0:18:51.17:0,51,670	0/0:7,0:7:21.07:0,21,276	0/0:41,0:40:99:0,117,1537	1/1:4,21:25:63.14:669,63,0	1/1:1,24:25:66.17:709,66,0	1/1:0,15:15:36.09:387,36,0
chr10	100427328	.	A	AG	13474.76	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-4.819;DP=519;FS=18.913;HRun=1;HaplotypeScore=52.8838;InbreedingCoeff=0.9941;MQ=80.71;MQ0=0;MQRankSum=-6.585;QD=44.04;ReadPosRankSum=3.132;VQSLOD=2.8087;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,47:47:99:2000,126,0	0/0:4,0:4:12.04:0,12,168	0/0:12,0:13:37.64:0,38,467	0/0:19,0:19:48:0,48,587	0/0:12,0:12:36.12:0,36,502	1/1:0,26:26:75.26:1196,75,0	1/1:2,12:14:36.12:575,36,0	1/1:1,25:26:75.26:1191,75,0	1/1:0,35:35:99:1628,102,0	0/0:20,0:20:60.20:0,60,839	0/0:14,0:14:42.14:0,42,586	0/0:18,0:18:51.17:0,51,710	0/0:14,0:14:42.14:0,42,587	0/0:12,0:12:36.12:0,36,501	0/0:26,0:26:75.24:0,75,1031	1/1:1,17:18:51.17:814,51,0	0/0:18,0:18:48.16:0,48,670	1/1:0,10:10:30.10:472,30,0	1/1:1,23:24:66.23:1055,66,0	1/1:2,25:27:69.22:1068,69,0	1/1:1,21:22:63.21:1007,63,0	0/0:13,0:13:39.13:0,39,538	0/0:10,0:10:27.09:0,27,376	0/0:14,0:14:39.13:0,39,545	0/0:6,0:6:18.06:0,18,241	1/1:2,20:22:24.24:939,24,0	1/1:1,19:20:51.17:811,51,0	1/1:0,15:15:45.15:719,45,0
chr10	100427408	.	A	AT	5357.08	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=8.744;DP=373;FS=5.658;HRun=7;HaplotypeScore=56.1305;InbreedingCoeff=0.9645;MQ=70.34;MQ0=0;MQRankSum=-10.483;QD=28.80;ReadPosRankSum=1.197;VQSLOD=5.5685;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:39.06:0,39,376	0/0:11,0:11:30.05:0,30,290	0/0:7,0:7:21.01:0,21,196	0/0:11,0:10:27.01:0,27,252	0/0:18,0:18:48.02:0,48,454	1/1:2,18:20:57.07:643,57,0	1/1:1,10:11:27.08:326,27,0	1/1:6,18:24:31.18:646,31,0	1/1:4,19:23:57.13:672,57,0	0/0:18,0:18:36.05:0,36,348	0/0:8,0:8:24.03:0,24,227	0/0:8,0:8:24.04:0,24,232	0/0:8,0:8:21.03:0,21,203	0/0:8,0:8:21.03:0,21,203	0/0:14,0:14:39.06:0,39,376	1/1:3,16:19:48.15:580,48,0	0/0:15,0:15:41.96:0,42,380	1/1:1,1:2:3.01:36,3,0	1/1:6,11:17:17.17:380,17,0	1/1:2,16:18:46.67:609,47,0	1/1:2,5:7:15:165,15,0	0/0:15,0:15:42.06:0,42,406	0/0:10,0:10:30.05:0,30,290	0/0:6,0:6:18.03:0,18,174	0/0:14,0:14:42.07:0,42,406	1/1:7,12:19:13.14:432,13,0	1/1:2,15:17:45.14:543,45,0	1/1:0,9:9:27.08:326,27,0
chr10	100429228	.	T	TTTG	7419.27	PASS	AB=0.600;AC=25;AF=0.446;AN=56;BaseQRankSum=14.091;DP=454;FS=151.977;HRun=0;HaplotypeScore=76.4246;InbreedingCoeff=0.9112;MQ=76.44;MQ0=8;MQRankSum=-14.831;QD=59.35;ReadPosRankSum=-1.797;VQSLOD=0.5382;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:9:24.08:566,24,0	0/0:6,0:6:18.06:0,18,317	0/0:24,0:24:65.86:0,66,1075	0/0:17,0:15:40.02:0,40,649	0/0:38,0:37:99:0,105,1823	1/1:3,8:11:33.11:760,33,0	1/1:0,8:8:24.08:566,24,0	1/1:2,6:9:27.05:586,27,0	1/1:2,3:4:9.03:196,9,0	0/0:25,0:25:72.24:0,72,1241	0/0:28,0:28:78.23:0,78,1343	0/0:17,0:17:51.17:0,51,899	0/0:25,0:25:75.26:0,75,1323	0/0:20,0:19:57.20:0,57,1000	0/0:24,0:23:15.68:0,16,1077	1/1:2,6:8:24.08:557,24,0	0/0:22,0:22:66.23:0,66,1164	1/1:0,4:4:9.03:195,9,0	1/1:3,7:10:30.07:629,30,0	1/1:1,18:18:51.18:1199,51,0	1/1:0,5:6:11.99:232,12,0	0/0:24,0:23:60.13:0,60,993	0/0:23,0:23:69.20:0,69,1180	0/0:21,0:20:57.20:0,57,1004	0/0:14,0:13:39.13:0,39,688	0/1:5,10:15:7.79:877,0,8	1/1:2,9:13:30.10:703,30,0	1/1:0,6:6:15.05:354,15,0
chr10	100429689	.	GCA	G	1789.92	PASS	AB=0.969;AC=29;AF=0.558;AN=52;BaseQRankSum=6.531;DP=576;FS=1.147;HRun=0;HaplotypeScore=100.7383;InbreedingCoeff=0.1220;MQ=60.02;MQ0=18;MQRankSum=0.089;QD=4.69;ReadPosRankSum=-0.634;VQSLOD=2.7525;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:23:5.99:0,6,49	0/1:8,0:7:9.20:9,0,163	./.	./.	0/0:21,2:22:3.17:0,3,421	0/1:18,2:20:2.54:193,0,3	1/1:24,1:25:30.35:258,30,0	1/1:27,0:25:8.93:69,9,0	0/1:20,0:20:11.67:101,0,12	0/1:17,1:18:8.93:9,0,208	0/1:17,0:19:23.05:23,0,180	0/0:15,0:13:12.04:0,12,172	0/1:12,0:12:9.04:9,0,248	0/1:17,0:16:5.83:6,0,132	0/0:16,0:15:4.61:0,5,220	1/1:8,1:9:9.56:59,10,0	1/1:30,0:31:28.90:279,29,0	0/1:17,0:16:1.37:58,0,1	1/1:16,0:16:4.52:64,5,0	1/1:14,0:14:5.97:33,6,0	0/1:35,2:35:17.35:345,0,17	0/0:19,0:18:24.53:0,25,420	0/1:19,0:19:1.72:2,0,301	0/0:35,0:34:13.14:0,13,448	0/1:19,0:20:28.31:28,0,237	1/1:17,0:17:14.78:179,15,0	1/1:14,3:18:3.94:168,4,0	1/1:14,1:14:5.49:60,5,0
chr10	100429727	.	ACACC	A	2920.11	PASS	AB=0.995;AC=21;AF=0.375;AN=56;BaseQRankSum=-5.941;DP=745;FS=0.000;HRun=0;HaplotypeScore=174.7693;InbreedingCoeff=-0.4252;MQ=55.31;MQ0=52;MQRankSum=1.764;QD=5.41;ReadPosRankSum=-1.739;VQSLOD=1.8985;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:30:21.44:0,21,361	0/1:12,0:10:83.83:84,0,162	0/0:30,0:8:13.90:0,14,162	0/1:31,0:16:4.23:4,0,153	0/0:33,0:31:53.21:0,53,1105	0/1:19,0:18:42.45:238,0,42	0/1:37,0:37:45.93:175,0,46	0/1:35,0:31:54.70:186,0,55	0/1:22,1:23:37.09:37,0,148	0/0:25,0:23:59.80:0,60,737	0/0:20,0:20:21.89:0,22,606	0/1:22,0:17:99:145,0,173	0/0:21,0:19:43.06:0,43,723	0/1:22,0:19:99:150,0,129	0/1:27,0:25:99:175,0,289	0/1:18,0:16:50.43:50,0,56	1/1:41,3:43:9.43:640,9,0	0/1:19,0:15:32.49:39,0,32	0/1:20,0:17:7.93:75,0,8	0/0:20,0:20:16.04:0,16,55	0/1:54,0:48:99:299,0,178	0/1:23,0:22:94.16:94,0,545	0/1:21,0:20:82.63:83,0,339	0/1:47,1:44:99:294,0,578	0/0:19,0:18:40.16:0,40,681	0/1:21,0:19:17.04:204,0,17	0/1:24,0:22:68.18:104,0,68	0/1:19,0:18:7.70:8,0,41
chr10	100429728	.	CA	C	864.37	PASS	AB=0.997;AC=16;AF=0.286;AN=56;BaseQRankSum=15.450;DP=748;FS=0.000;HRun=1;HaplotypeScore=150.5225;InbreedingCoeff=0.3461;MQ=56.12;MQ0=51;MQRankSum=0.939;QD=2.79;ReadPosRankSum=-0.750;VQSLOD=-0.6316;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:31:39.47:0,39,412	0/0:12,0:10:2.64:0,3,224	0/0:31,0:9:23.91:0,24,233	0/0:32,0:17:35.16:0,35,308	0/0:33,0:31:73.66:0,74,887	0/1:19,0:18:7.67:51,0,8	1/1:37,0:37:33.86:203,34,0	0/1:36,1:32:43.99:44,0,205	1/1:24,0:24:17.53:116,18,0	0/0:25,0:23:61.65:0,62,684	0/0:20,0:20:42.16:0,42,472	0/0:22,0:17:38.64:0,39,350	0/0:21,0:19:46.25:0,46,561	0/0:22,0:19:45.93:0,46,364	0/0:27,0:25:65.09:0,65,600	0/1:18,0:16:2.85:72,0,3	0/0:45,0:44:60.86:0,61,556	0/1:19,0:15:37.58:38,0,44	0/1:20,0:17:31.14:49,0,31	1/1:18,1:19:18.81:68,19,0	0/1:54,0:48:51.56:168,0,52	0/0:22,0:22:65.64:0,66,691	0/0:21,0:20:30:0,30,433	0/0:48,0:44:93:0,93,990	0/0:19,0:18:34.83:0,35,442	0/1:21,0:19:53.83:59,0,54	0/1:24,0:22:6.99:65,0,7	1/1:16,2:17:25.93:113,26,0
chr10	100429729	.	ACC	A	2794.30	PASS	AB=0.982;AC=19;AF=0.339;AN=56;BaseQRankSum=-7.019;DP=748;FS=1.069;HRun=6;HaplotypeScore=155.0932;InbreedingCoeff=-0.3170;MQ=56.34;MQ0=47;MQRankSum=0.158;QD=5.57;ReadPosRankSum=-0.795;VQSLOD=-0.4196;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:32:15.20:0,15,327	0/1:11,0:9:60.27:63,0,60	0/0:31,0:9:16.91:0,17,195	0/1:28,0:17:4.72:5,0,153	0/0:32,0:31:44.42:0,44,641	0/1:20,0:19:62.57:64,0,63	0/1:39,0:39:9.05:9,0,145	0/1:37,0:32:69.85:115,0,70	0/0:23,0:24:37.93:0,38,203	0/0:24,0:22:46.36:0,46,435	0/0:19,0:19:31.44:0,31,410	0/1:20,0:17:37.69:169,0,38	0/0:21,0:19:37.22:0,37,448	0/1:21,1:19:19.19:255,0,19	0/1:25,1:25:54.90:310,0,55	0/0:18,0:16:6.86:0,7,108	1/1:37,7:43:99:1088,122,0	0/1:18,0:15:6.93:7,0,66	0/1:20,0:17:30.05:30,0,38	0/0:19,0:19:24.45:0,24,106	0/1:57,0:51:29.04:29,0,233	0/1:22,0:22:99:194,0,151	0/1:21,1:21:99:136,0,107	0/1:47,1:44:80.32:432,0,80	0/1:19,0:18:0.23:0,0,385	0/1:21,0:19:30.87:31,0,64	0/1:24,0:22:20.06:20,0,134	0/0:18,0:18:29.50:0,29,225
chr10	100429732	.	C	CA	1229.65	PASS	AB=0.967;AC=15;AF=0.268;AN=56;BaseQRankSum=13.759;DP=741;FS=1.499;HRun=0;HaplotypeScore=153.2363;InbreedingCoeff=0.1960;MQ=57.57;MQ0=47;MQRankSum=4.287;QD=3.97;ReadPosRankSum=1.465;VQSLOD=3.6646;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:28:15.42:0,15,564	0/0:11,0:9:24.06:0,24,283	0/0:30,0:10:27.08:0,27,348	0/0:30,0:17:26.73:0,27,391	0/0:34,0:33:84.22:0,84,1116	0/1:18,1:18:35.09:35,0,40	1/1:39,0:39:8.79:225,9,0	0/1:37,0:32:82.86:83,0,272	1/1:23,1:24:5.30:193,5,0	0/0:25,0:23:66.16:0,66,860	0/0:20,0:20:48.61:0,49,631	0/0:22,0:18:41.76:0,42,433	0/0:20,0:18:49.41:0,49,668	0/0:23,0:20:39.88:0,40,430	0/0:26,0:25:65.78:0,66,684	0/1:18,1:17:18.26:110,0,18	0/0:44,0:43:99:0,120,889	0/1:18,0:14:57.31:57,0,68	0/1:20,0:17:70.76:80,0,71	1/1:21,0:21:19.83:120,20,0	0/1:51,3:49:78.48:234,0,78	0/0:23,0:23:65.73:0,66,722	0/0:22,0:21:48.94:0,49,524	0/0:47,0:43:99:0,114,1146	0/0:19,0:19:40.06:0,40,517	0/1:19,1:18:78.07:83,0,78	0/1:22,1:21:42.31:42,0,77	0/1:15,1:15:0.33:135,0,0
chr10	100431049	.	GTCTC	G	827.10	PASS	AB=0.866;AC=13;AF=0.232;AN=56;BaseQRankSum=9.445;DP=917;FS=5.628;HRun=0;HaplotypeScore=292.3904;InbreedingCoeff=0.1033;MQ=54.83;MQ0=12;MQRankSum=-9.011;QD=3.01;ReadPosRankSum=-3.018;VQSLOD=1.2823;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:20.91:0,21,93	0/0:10,0:10:30.10:0,30,673	0/0:57,0:36:78.87:0,79,1664	0/0:85,0:42:79.60:0,80,1841	0/0:40,0:40:99:0,114,2943	0/1:19,3:24:1.99:54,0,2	1/1:18,3:21:2.56:93,3,0	0/1:42,0:40:20.01:20,0,320	0/1:29,7:36:21.01:138,0,21	0/0:43,0:42:99:0,126,3090	0/0:27,0:27:75.73:0,76,1856	0/0:26,0:26:69.71:0,70,1755	0/0:26,0:26:78.25:0,78,1996	0/0:30,0:30:84.76:0,85,2156	0/0:36,0:36:99:0,99,2562	0/1:17,6:24:59.04:62,0,59	0/0:41,0:41:99:0,111,2756	0/1:7,1:8:28.99:29,0,127	0/1:20,3:22:91.74:92,0,139	0/0:26,3:31:16.52:0,17,68	1/1:21,1:22:0.92:16,1,0	0/0:41,0:41:99:0,123,2913	0/0:34,0:34:87.30:0,87,2270	0/0:33,0:33:93.30:0,93,2393	0/0:29,0:29:78.24:0,78,1878	0/1:33,8:44:99:302,0,397	0/1:18,4:23:58.26:151,0,58	0/1:6,2:8:0.83:21,0,1
chr10	100431051	.	C	CTG	4875.50	PASS	AB=0.826;AC=14;AF=0.250;AN=56;BaseQRankSum=10.308;DP=904;FS=5.513;HRun=0;HaplotypeScore=256.3940;InbreedingCoeff=-0.1235;MQ=54.27;MQ0=11;MQRankSum=-10.542;QD=13.81;ReadPosRankSum=-4.379;VQSLOD=3.1610;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,20:52:58.95:700,59,0	0/0:11,0:11:30.09:0,30,421	0/0:56,0:34:81.64:0,82,1060	0/0:78,0:43:87.15:0,87,1287	0/0:40,0:40:99:0,114,1697	0/1:14,7:21:41.50:346,0,41	0/1:18,3:21:29.14:253,0,29	0/1:39,0:37:86.53:508,0,87	0/1:30,5:36:76.54:518,0,77	0/0:43,0:42:99:0,126,1857	0/0:27,0:27:75.22:0,75,1097	0/0:26,0:26:69.23:0,69,1045	0/0:27,0:27:78.25:0,78,1166	0/0:30,0:30:84.27:0,84,1253	0/0:36,0:36:99:0,105,1557	0/1:20,4:24:99:316,0,107	0/0:39,0:39:99:0,111,1641	0/1:5,3:8:31.27:92,0,31	0/1:21,3:23:48.32:447,0,48	0/1:21,10:31:70.49:288,0,70	0/1:17,3:20:12.36:183,0,12	0/0:42,0:42:99:0,126,1785	0/0:33,0:33:87.30:0,87,1324	0/0:31,0:31:93.30:0,93,1395	0/0:29,0:29:78.20:0,78,1104	0/1:32,14:46:99:768,0,147	0/1:16,7:23:85.11:265,0,85	0/1:6,2:8:10.97:192,0,11
chr10	100431057	.	G	GTTTCTCTC	7989.03	PASS	AB=0.842;AC=17;AF=0.304;AN=56;BaseQRankSum=15.606;DP=890;FS=1.020;HRun=0;HaplotypeScore=349.0135;InbreedingCoeff=0.4097;MQ=52.78;MQ0=13;MQRankSum=-14.971;QD=23.43;ReadPosRankSum=-0.537;VQSLOD=3.4781;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:33,20:53:5.63:292,6,0	0/0:12,0:12:33.07:0,33,679	0/0:48,0:31:82.76:0,83,1643	0/0:71,0:41:90.80:0,91,1696	0/0:38,0:38:99:0,114,3073	0/1:18,7:25:13.76:219,0,14	0/1:18,3:21:11.42:79,0,11	0/1:39,0:37:30.13:1215,0,30	0/1:35,5:40:63.81:360,0,64	0/0:45,0:44:99:0,123,3130	0/0:27,0:27:74.99:0,75,1879	0/0:27,0:27:69.04:0,69,1811	0/0:27,0:27:81.25:0,81,2150	0/0:34,0:34:93.08:0,93,2353	0/0:36,0:36:99:0,108,2806	1/1:19,4:23:5.34:397,5,0	0/0:39,0:39:99:0,108,2752	0/1:7,2:9:8.07:520,0,8	1/1:21,3:23:20.74:1177,21,0	0/1:22,10:32:0.29:41,0,0	0/0:20,2:22:3.11:0,3,43	0/0:36,0:36:99:0,105,2726	0/0:31,0:31:84.29:0,84,2360	0/0:31,0:31:93.30:0,93,2534	0/0:25,0:25:72.23:0,72,1926	0/1:33,14:47:99:2705,0,112	1/1:13,7:20:38.77:827,39,0	1/1:6,2:8:11.85:157,12,0
chr10	100431061	.	G	GTGTA	6195.76	PASS	AB=0.947;AC=20;AF=0.357;AN=56;BaseQRankSum=14.746;DP=845;FS=3.818;HRun=0;HaplotypeScore=272.2478;InbreedingCoeff=0.6053;MQ=52.21;MQ0=12;MQRankSum=-13.710;QD=22.29;ReadPosRankSum=-0.415;VQSLOD=4.4176;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:21.39:0,21,245	0/0:10,0:10:30.08:0,30,494	0/0:45,0:27:63.99:0,64,961	0/0:63,0:36:81.02:0,81,1252	0/0:39,0:39:99:0,117,2130	1/1:21,2:23:16.36:436,16,0	1/1:13,4:18:10.05:285,10,0	0/1:28,4:32:99:483,0,177	1/1:31,2:35:1.05:796,1,0	0/0:43,0:42:99:0,120,2108	0/0:28,0:28:75.18:0,75,1278	0/0:25,0:25:69.18:0,69,1193	0/0:29,0:29:81.26:0,81,1477	0/0:36,0:36:93.27:0,93,1631	0/0:37,0:37:99:0,108,1889	1/1:18,3:22:34.58:771,35,0	0/0:40,0:40:99:0,105,1811	0/1:10,0:10:26.45:54,0,26	0/1:19,0:19:21.93:508,0,22	1/1:25,3:30:24.20:459,24,0	1/1:16,3:20:5.88:75,6,0	0/0:35,0:35:99:0,102,1892	0/0:31,0:31:84.27:0,84,1526	0/0:31,0:31:93.30:0,93,1703	0/0:25,0:25:69.21:0,69,1233	0/1:39,4:44:99:1474,0,107	1/1:15,2:18:40.38:739,40,0	1/1:7,0:7:6.02:116,6,0
chr10	100431063	.	G	GTA	1435.20	PASS	AB=0.985;AC=15;AF=0.268;AN=56;BaseQRankSum=12.760;DP=852;FS=4.512;HRun=0;HaplotypeScore=263.1502;InbreedingCoeff=0.1041;MQ=51.73;MQ0=10;MQRankSum=-10.942;QD=5.05;ReadPosRankSum=2.531;VQSLOD=2.8760;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:30.58:0,31,167	0/0:10,0:10:30.07:0,30,412	0/0:45,0:27:66.13:0,66,862	0/0:60,0:36:84.02:0,84,1096	0/0:40,0:40:99:0,117,1748	0/1:22,2:24:25.92:177,0,26	1/1:18,0:18:11.69:99,12,0	0/1:32,0:32:60.47:60,0,300	0/1:36,0:36:19.89:211,0,20	0/0:43,0:42:99:0,120,1751	0/0:27,0:27:75.18:0,75,1057	0/0:26,0:26:75.17:0,75,1037	0/0:29,0:29:87.24:0,87,1259	0/0:35,0:35:99:0,99,1392	0/0:37,0:37:99:0,108,1557	0/1:22,0:22:7.16:169,0,7	0/0:41,0:41:99:0,114,1581	0/1:10,0:10:17.02:17,0,56	0/1:21,0:21:99:107,0,113	1/1:29,1:30:0.97:161,1,0	0/1:20,0:20:1.51:2,0,16	0/0:35,0:35:99:0,105,1557	0/0:31,0:31:84.27:0,84,1253	0/0:33,0:33:98.64:0,99,1414	0/0:25,0:25:69.21:0,69,1008	0/1:42,3:45:99:467,0,183	0/1:19,0:19:15.27:98,0,15	1/1:7,0:7:0.68:22,1,0
chr10	100431067	.	ATG	A	297.83	PASS	AB=0.964;AC=4;AF=0.071;AN=56;BaseQRankSum=3.479;DP=857;FS=2.984;HRun=0;HaplotypeScore=266.7449;InbreedingCoeff=0.3634;MQ=51.25;MQ0=9;MQRankSum=1.517;QD=3.50;ReadPosRankSum=-3.573;VQSLOD=1.6325;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,24:50:32.01:385,32,0	0/1:9,0:9:12.59:13,0,293	0/0:41,0:24:41.72:0,42,587	0/0:55,1:34:66:0,66,906	0/0:40,0:40:84.27:0,84,1327	0/0:22,0:24:19.45:0,19,197	0/0:20,0:20:16.31:0,16,98	0/0:35,0:35:38.67:0,39,294	0/0:35,0:37:41.44:0,41,320	0/0:43,1:43:77.71:0,78,1708	0/0:27,0:27:66.19:0,66,1005	0/0:25,0:25:63.21:0,63,1008	0/0:29,1:30:41.61:0,42,1150	0/0:36,1:37:56.67:0,57,1377	0/0:38,0:38:99:0,102,1610	0/0:19,0:22:38.46:0,38,324	0/0:43,0:43:99:0,99,1514	0/0:10,0:10:9.26:0,9,61	0/0:20,0:21:40.95:0,41,347	0/0:25,0:31:22.61:0,23,169	0/0:19,0:19:2.46:0,2,37	0/0:35,0:35:86.53:0,87,1316	0/0:29,1:30:32.57:0,33,1002	0/0:34,0:34:5.62:0,6,1041	0/1:24,2:26:10.13:10,0,810	0/0:40,0:47:99:0,103,852	0/0:15,0:19:41.72:0,42,379	0/0:7,0:7:5.97:0,6,49
chr10	100431119	.	AT	A	9191.20	PASS	AB=0.579;AC=25;AF=0.446;AN=56;BaseQRankSum=15.357;DP=784;FS=1.203;HRun=7;HaplotypeScore=125.7684;InbreedingCoeff=0.9261;MQ=83.72;MQ0=1;MQRankSum=-4.171;QD=25.39;ReadPosRankSum=-2.113;VQSLOD=2.8372;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,60:61:99:1680,165,0	0/0:8,0:8:21.07:0,21,264	0/0:30,0:28:57.27:0,57,801	0/0:36,0:35:80.25:0,80,1003	0/0:26,0:26:66.19:0,66,804	1/1:1,25:26:66.14:670,66,0	1/1:3,31:34:78.17:796,78,0	1/1:1,28:28:72.12:722,72,0	1/1:3,31:34:93.20:945,93,0	0/0:44,0:44:99:0,108,1353	0/0:21,0:21:60.19:0,60,752	0/0:24,0:24:69.22:0,69,868	0/0:28,0:28:78.25:0,78,980	0/0:37,0:37:99:0,105,1295	0/0:41,0:41:99:0,117,1458	1/1:3,21:24:60.12:609,60,0	0/0:30,0:30:87.28:0,87,1092	1/1:1,6:7:18.04:184,18,0	1/1:3,20:23:60.13:611,60,0	1/1:4,28:32:72.15:731,72,0	1/1:2,25:27:60.09:611,60,0	0/0:27,0:27:72.22:0,72,894	0/0:19,0:19:48.15:0,48,604	0/0:34,0:34:99:0,102,1269	0/0:17,0:17:51.15:0,51,621	0/1:9,24:33:32.02:652,0,32	1/1:0,19:19:57.13:581,57,0	1/1:0,13:13:39.09:398,39,0
chr10	100431576	.	G	GT	501.53	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.390;DP=529;FS=0.911;HRun=7;HaplotypeScore=51.5222;InbreedingCoeff=0.9281;MQ=79.70;MQ0=0;MQRankSum=-2.061;QD=25.08;ReadPosRankSum=2.112;VQSLOD=4.0610;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:51.07:596,51,0	0/0:10,0:10:21.02:0,21,203	0/0:19,0:19:30.04:0,30,290	0/0:8,0:8:18.02:0,18,171	0/0:25,0:25:69.07:0,69,657	0/0:19,0:19:57.09:0,57,550	0/0:10,0:10:24.03:0,24,232	0/0:37,0:37:63.68:0,64,809	0/0:17,0:17:45.07:0,45,434	0/0:24,0:24:69.11:0,69,666	0/0:18,0:18:51.08:0,51,492	0/0:14,0:14:42.07:0,42,405	0/0:20,0:20:54.08:0,54,520	0/0:17,0:17:51.08:0,51,492	0/0:24,0:24:69.10:0,69,662	0/0:12,0:12:33.05:0,33,319	0/0:26,0:26:57.04:0,57,539	0/0:23,0:23:57.93:0,58,545	0/0:19,0:20:50.87:0,51,477	0/0:32,0:32:75.11:0,75,724	0/0:3,0:3:9.01:0,9,87	0/0:16,0:16:48.08:0,48,463	0/0:25,0:25:63.08:0,63,602	0/0:12,0:12:24.03:0,24,232	0/0:14,0:14:36.06:0,36,347	0/0:25,0:25:66.10:0,66,637	0/0:31,0:31:81.12:0,81,782	0/0:8,0:8:24.04:0,24,232
chr10	100431723	.	CT	C	3587.87	PASS	AB=0.911;AC=26;AF=0.464;AN=56;BaseQRankSum=12.374;DP=507;FS=0.387;HRun=11;HaplotypeScore=80.9769;InbreedingCoeff=0.8174;MQ=67.24;MQ0=0;MQRankSum=-1.219;QD=14.83;ReadPosRankSum=1.831;VQSLOD=4.2061;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:28:42.96:0,43,238	0/0:13,0:13:36.01:0,36,360	0/1:17,2:12:19.37:19,0,96	0/1:10,1:8:27.36:46,0,27	0/0:20,0:24:35.80:0,36,536	1/1:5,15:20:7.25:264,7,0	1/1:2,11:13:29.95:246,30,0	1/1:12,20:31:56.72:468,57,0	1/1:2,14:16:35.94:295,36,0	0/0:22,0:22:42.10:0,42,442	0/0:17,0:17:34.32:0,34,348	0/0:15,0:16:41.95:0,42,422	0/0:12,0:12:36.09:0,36,383	0/0:14,1:15:5.91:0,6,265	0/0:17,1:18:20.47:0,20,416	1/1:2,10:13:32:252,32,0	0/0:34,0:36:59.47:0,59,739	1/1:3,13:16:25.12:303,25,0	1/1:10,7:18:21.53:158,22,0	1/1:4,26:30:68.87:566,69,0	1/1:1,11:12:32.94:271,33,0	0/0:14,0:14:36.09:0,36,384	0/0:16,0:16:45.10:0,45,473	0/0:14,0:14:36.09:0,36,384	0/0:18,0:19:47.93:0,48,477	1/1:3,15:18:38.92:320,39,0	1/1:3,10:13:29.96:246,30,0	1/1:3,8:11:6.96:134,7,0
chr10	100432853	.	A	ATGCTCTACCT	29137.11	PASS	AB=0.534;AC=25;AF=0.446;AN=56;BaseQRankSum=-17.049;DP=623;FS=6.818;HRun=0;HaplotypeScore=146.3044;InbreedingCoeff=0.9187;MQ=90.76;MQ0=0;MQRankSum=-16.661;QD=102.24;ReadPosRankSum=2.005;VQSLOD=5.1256;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:25:38.92:1986,39,0	0/0:8,0:8:24.08:0,24,830	0/0:30,0:30:90.28:0,90,2513	0/0:27,0:27:72.68:0,73,1941	0/0:22,0:21:63.20:0,63,1967	1/1:0,11:15:33.11:1806,33,0	1/1:1,8:17:24.08:1313,24,0	1/1:1,14:26:72.22:3149,72,0	1/1:1,15:22:45.15:2461,45,0	0/0:33,0:33:99:0,99,3079	0/0:19,0:19:57.18:0,57,1749	0/0:27,0:27:81.28:0,81,2525	0/0:23,0:23:69.24:0,69,2289	0/0:19,0:19:54.12:0,54,1690	0/0:27,0:27:78.27:0,78,2556	1/1:1,22:31:66.06:3612,66,0	0/0:20,0:20:57.20:0,57,1879	1/1:0,3:8:9.03:493,9,0	1/1:1,9:20:54.15:2212,54,0	1/1:0,21:36:69.06:3337,69,0	1/1:1,13:21:33.11:1806,33,0	0/0:24,0:24:72.25:0,72,2426	0/0:17,0:17:51.18:0,51,1753	0/0:23,0:23:69.22:0,69,2264	0/0:18,0:18:54.17:0,54,1808	0/1:4,19:31:99:3358,0,122	1/1:0,16:24:42.14:2299,42,0	1/1:0,7:8:24.08:1307,24,0
chr10	100433446	.	C	CTGTTGT	878.30	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.468;DP=819;FS=1.004;HRun=0;HaplotypeScore=167.6888;InbreedingCoeff=0.9859;MQ=75.81;MQ0=2;MQRankSum=-6.016;QD=25.09;ReadPosRankSum=-2.672;VQSLOD=2.6171;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,19:35:22.34:971,22,0	0/0:16,0:16:36.11:0,36,712	0/0:38,0:28:19.40:0,19,514	0/0:53,0:46:56.87:0,57,865	0/0:32,0:32:51.13:0,51,946	0/0:21,0:21:51.07:0,51,830	0/0:25,0:25:47.72:0,48,929	0/0:49,0:49:84.24:0,84,1503	0/0:34,0:34:75.24:0,75,1540	0/0:34,0:35:66.16:0,66,1251	0/0:30,0:30:57.18:0,57,1145	0/0:24,0:24:60.19:0,60,1222	0/0:28,0:28:66.18:0,66,1285	0/0:19,0:19:45.11:0,45,836	0/0:23,0:23:66.06:0,66,1275	0/0:23,0:23:48.15:0,48,982	0/0:23,0:23:60.19:0,60,1179	0/0:19,0:19:48.14:0,48,945	0/0:34,0:34:42.11:0,42,778	0/0:39,0:39:81.26:0,81,1668	0/0:46,0:45:99:0,102,1963	0/0:18,0:18:38.97:0,39,658	0/0:14,0:14:27.07:0,27,516	0/0:33,0:33:72.19:0,72,1409	0/0:25,0:25:51.15:0,51,982	0/0:33,0:33:65.74:0,66,1244	0/0:43,0:43:89.26:0,89,2016	0/0:7,0:7:21.04:0,21,368
chr10	100434010	.	T	TC	16166.65	PASS	AB=0.710;AC=54;AF=0.964;AN=56;BaseQRankSum=-0.404;DP=425;FS=22.274;HRun=0;HaplotypeScore=142.2664;InbreedingCoeff=-0.0419;MQ=74.07;MQ0=1;MQRankSum=-5.583;QD=38.04;ReadPosRankSum=3.230;VQSLOD=2.8128;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:39.13:610,39,0	1/1:0,2:2:6.02:96,6,0	0/1:7,11:18:99:418,0,100	0/1:18,5:21:99:368,0,106	1/1:1,11:12:20.96:335,21,0	1/1:0,20:20:54.18:851,54,0	1/1:2,9:11:24.03:355,24,0	1/1:4,30:33:93.29:1430,93,0	1/1:0,17:17:51.17:814,51,0	1/1:2,16:16:48.06:686,48,0	1/1:2,9:12:33:515,33,0	1/1:0,16:16:42.14:656,42,0	1/1:2,18:20:57.19:892,57,0	1/1:2,7:9:27.09:421,27,0	1/1:1,16:17:42.14:670,42,0	1/1:0,15:15:36.12:574,36,0	1/1:2,12:14:36.12:566,36,0	1/1:0,12:12:36.12:574,36,0	1/1:1,13:14:39.13:609,39,0	1/1:1,10:11:27.09:431,27,0	1/1:2,11:12:21.07:335,21,0	1/1:1,9:10:24.08:382,24,0	1/1:0,12:12:33.11:526,33,0	1/1:2,9:11:17.89:287,18,0	1/1:0,13:13:33.11:525,33,0	1/1:4,21:25:72.16:1091,72,0	1/1:0,18:18:48.16:765,48,0	1/1:1,8:9:24.08:384,24,0
chr10	100434031	.	CT	C	4462.53	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-1.318;DP=379;FS=29.839;HRun=4;HaplotypeScore=202.7159;InbreedingCoeff=-0.0507;MQ=54.89;MQ0=2;MQRankSum=-2.302;QD=11.77;ReadPosRankSum=6.670;VQSLOD=1.2185;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,1:16:6.33:82,6,0	0/1:3,0:3:2.93:16,0,3	0/1:14,0:10:14.30:14,0,55	0/1:16,0:12:16.71:88,0,17	1/1:11,0:11:11.62:81,12,0	1/1:16,0:16:29.69:205,30,0	1/1:12,0:12:19.08:151,19,0	1/1:35,0:33:40.47:330,40,0	1/1:15,0:15:35.35:270,35,0	1/1:10,1:11:26.86:208,27,0	1/1:12,0:12:9.48:91,9,0	1/1:17,0:17:20.35:205,20,0	1/1:21,1:21:50.58:360,51,0	1/1:6,0:6:0.89:31,1,0	1/1:14,0:14:24.73:202,25,0	1/1:9,1:10:29.79:228,30,0	1/1:15,0:15:24.30:155,24,0	1/1:8,1:9:15.55:152,16,0	1/1:12,0:12:17.84:138,18,0	1/1:10,0:10:21.72:141,22,0	1/1:12,0:11:15.89:95,16,0	1/1:14,0:14:12.30:116,12,0	1/1:11,0:12:24.03:163,24,0	1/1:8,1:9:5.66:42,6,0	1/1:15,0:14:20.46:164,20,0	1/1:22,1:23:59.68:446,60,0	1/1:16,0:16:32.74:233,33,0	1/1:2,0:2:5.98:54,6,0
chr10	100434041	.	ATGTG	A	1184.29	PASS	AB=0.801;AC=24;AF=0.462;AN=52;BaseQRankSum=5.876;DP=363;FS=0.845;HRun=0;HaplotypeScore=208.4765;InbreedingCoeff=0.4273;MQ=36.68;MQ0=10;MQRankSum=-2.360;QD=6.62;ReadPosRankSum=2.685;VQSLOD=2.6126;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:13:6.31:36,6,0	0/0:3,0:3:6.02:0,6,141	./.	./.	1/1:12,0:12:0.18:2,0,0	1/1:9,4:13:9.03:127,9,0	1/1:11,2:13:3.55:47,4,0	1/1:26,0:24:7.58:54,8,0	1/1:12,3:14:12.04:175,12,0	0/0:11,0:11:12.04:0,12,218	0/0:14,0:13:2.73:0,3,48	0/0:13,0:15:17.54:0,18,286	0/0:21,0:20:11.69:0,12,209	0/0:7,0:7:6.02:0,6,110	0/0:17,0:17:8.99:0,9,180	1/1:6,2:8:9.03:124,9,0	0/1:11,1:13:15.10:15,0,168	0/1:7,1:9:4.78:64,0,5	0/1:7,0:8:16.45:46,0,16	1/1:6,2:9:9.49:119,9,0	0/0:12,0:9:3.01:0,3,70	0/0:18,0:16:11.83:0,12,225	0/0:17,0:17:12.04:0,12,272	0/0:11,0:11:2.91:0,3,71	0/0:17,0:16:6.02:0,6,127	1/1:15,6:21:23.55:333,24,0	0/1:10,5:15:17.80:198,0,18	1/1:2,0:2:2.88:15,3,0
chr10	100434084	.	TGAGA	T	3805.17	PASS	AB=0.857;AC=23;AF=0.411;AN=56;BaseQRankSum=3.453;DP=401;FS=0.552;HRun=0;HaplotypeScore=132.3303;InbreedingCoeff=0.8375;MQ=57.62;MQ0=26;MQRankSum=-5.088;QD=25.89;ReadPosRankSum=-1.370;VQSLOD=3.3702;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:29.88:0,30,648	0/0:3,0:3:9.03:0,9,189	0/0:27,0:4:2.90:0,3,150	0/0:43,0:17:20.96:0,21,348	0/0:18,0:18:35.51:0,36,879	1/1:9,6:15:17.87:312,18,0	1/1:8,3:11:5.83:70,6,0	1/1:3,12:14:29.96:379,30,0	1/1:7,1:8:18.03:265,18,0	0/0:15,0:14:39.51:0,40,766	0/0:10,0:10:14.92:0,15,317	0/0:12,0:12:16.76:0,17,316	0/0:16,0:15:29.77:0,30,700	0/0:9,0:10:18.06:0,18,454	0/0:16,0:16:30.54:0,31,766	1/1:5,1:6:14.59:204,15,0	0/0:13,0:13:11.92:0,12,252	1/1:9,4:13:36.01:502,36,0	1/1:9,1:8:23.78:290,24,0	1/1:8,3:11:17.88:311,18,0	1/1:15,0:12:6.02:105,6,0	0/0:17,0:16:26.88:0,27,640	0/0:12,0:12:24.08:0,24,588	0/0:9,0:9:9.03:0,9,226	0/0:15,0:15:23.94:0,24,567	0/1:15,3:17:53.07:384,0,53	1/1:12,4:16:36.12:618,36,0	1/1:6,3:9:23.57:365,24,0
chr10	100434916	.	GA	G	2778.79	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=17.020;DP=516;FS=3.157;HRun=3;HaplotypeScore=112.4313;InbreedingCoeff=0.9786;MQ=91.38;MQ0=0;MQRankSum=-16.078;QD=12.81;ReadPosRankSum=1.932;VQSLOD=2.5169;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,32:38:62.98:417,63,0	0/0:4,0:4:12.04:0,12,173	0/0:31,0:31:90.29:0,90,1259	0/0:21,0:21:57.07:0,57,742	0/0:22,0:22:66.22:0,66,949	1/1:4,13:16:35.60:245,36,0	1/1:4,10:14:32.52:213,33,0	1/1:4,18:22:53.69:399,54,0	1/1:1,18:19:50.33:333,50,0	0/0:23,0:23:66.22:0,66,950	0/0:24,0:24:66.22:0,66,951	0/0:13,0:13:39.12:0,39,545	0/0:19,0:19:57.19:0,57,821	0/0:16,0:16:48.15:0,48,669	0/0:16,0:16:48.16:0,48,691	1/1:2,8:10:22.29:141,22,0	0/0:27,0:27:78.24:0,78,1089	1/1:2,3:5:8.93:64,9,0	1/1:6,4:10:12.10:77,12,0	1/1:7,23:30:66.02:413,66,0	1/1:6,8:14:13.42:83,13,0	0/0:19,0:19:54.16:0,54,742	0/0:28,0:28:81.23:0,81,1143	0/0:15,0:15:45.14:0,45,631	0/0:21,0:21:63.21:0,63,907	1/1:2,16:18:41.66:295,42,0	1/1:1,11:12:29.68:201,30,0	1/1:3,5:8:17.85:127,18,0
chr10	100434920	.	CTGG	C	3542.20	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=17.123;DP=486;FS=3.686;HRun=0;HaplotypeScore=126.3946;InbreedingCoeff=0.9592;MQ=91.72;MQ0=0;MQRankSum=-16.624;QD=19.25;ReadPosRankSum=2.935;VQSLOD=3.6833;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:34:53.32:492,53,0	0/0:4,0:4:12.04:0,12,296	0/0:30,0:30:90.29:0,90,2040	0/0:18,0:19:57.07:0,57,1180	0/0:23,0:23:69.24:0,69,1674	1/1:1,13:14:32.90:275,33,0	1/1:0,10:10:29.50:220,30,0	1/1:0,18:18:54.01:481,54,0	1/1:0,18:18:50.52:384,51,0	0/0:21,0:21:60.21:0,60,1452	0/0:24,0:24:72.25:0,72,1743	0/0:14,0:14:42.14:0,42,1033	0/0:20,0:20:60.19:0,60,1426	0/0:17,0:17:51.18:0,51,1252	0/0:19,0:19:57.20:0,57,1397	1/1:1,8:9:10.54:149,11,0	0/0:28,0:28:84.29:0,84,2058	1/1:0,3:3:8.99:74,9,0	1/1:2,4:6:14.25:105,14,0	1/1:4,23:27:55.20:493,55,0	1/1:3,7:11:4.87:82,5,0	0/0:18,0:18:54.19:0,54,1316	0/0:28,0:28:81.28:0,81,1971	0/0:16,0:16:48.16:0,48,1183	0/0:21,0:21:63.22:0,63,1553	1/1:1,16:17:44.97:392,45,0	1/1:1,11:12:32.92:264,33,0	1/1:0,4:5:14.99:131,15,0
chr10	100434924	.	ATC	A	4019.30	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=17.076;DP=492;FS=3.149;HRun=0;HaplotypeScore=114.8287;InbreedingCoeff=0.9823;MQ=89.29;MQ0=0;MQRankSum=-15.755;QD=21.73;ReadPosRankSum=2.306;VQSLOD=4.0366;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:58.16:554,58,0	0/0:6,0:6:18.05:0,18,303	0/0:27,0:27:81.27:0,81,1449	0/0:19,0:19:47.32:0,47,917	0/0:24,0:24:72.25:0,72,1390	1/1:1,13:14:31.96:312,32,0	1/1:0,10:10:28.25:244,28,0	1/1:1,18:19:56.96:543,57,0	1/1:1,18:19:48.20:432,48,0	0/0:21,0:21:63.21:0,63,1187	0/0:23,0:23:69.17:0,69,1189	0/0:16,0:16:48.15:0,48,884	0/0:19,0:19:57.18:0,57,1068	0/0:17,0:17:51.17:0,51,985	0/0:19,0:19:57.20:0,57,1092	1/1:0,8:8:21.01:190,21,0	0/0:32,0:32:90.29:0,90,1683	1/1:1,3:4:11.98:104,12,0	1/1:3,4:7:15.34:117,15,0	1/1:4,23:27:64.71:601,65,0	1/1:1,7:8:9.89:84,10,0	0/0:17,0:17:51.14:0,51,909	0/0:27,0:27:78.27:0,78,1505	0/0:18,0:18:51.16:0,51,918	0/0:22,0:22:66.19:0,66,1207	1/1:1,16:17:45.06:432,45,0	1/1:1,11:12:32.63:293,33,0	1/1:3,4:7:13.84:115,14,0
chr10	100439101	.	T	TA	9315.16	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=3.096;DP=639;FS=5.220;HRun=5;HaplotypeScore=72.3458;InbreedingCoeff=0.9914;MQ=68.28;MQ0=0;MQRankSum=-0.602;QD=33.39;ReadPosRankSum=-0.414;VQSLOD=5.0762;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.14:0,66,700	0/0:11,0:11:33.08:0,33,355	0/0:8,0:8:16.49:0,16,171	0/0:8,0:7:14.38:0,14,188	0/0:31,0:31:78.18:0,78,830	1/1:1,29:30:75.24:987,75,0	1/1:2,19:21:51.17:671,51,0	1/1:4,26:30:75.24:984,75,0	1/1:2,19:21:54.18:711,54,0	0/0:29,0:29:72.17:0,72,769	0/0:30,0:30:81.18:0,81,862	0/0:20,0:20:57.14:0,57,612	0/0:20,0:20:51.12:0,51,548	0/0:21,0:21:57.14:0,57,612	0/0:30,0:30:78.19:0,78,838	1/1:3,25:28:75.24:987,75,0	0/0:30,0:30:78.17:0,78,827	1/1:2,16:18:45.15:588,45,0	1/1:2,26:28:78.22:985,78,0	1/1:6,24:30:72.15:908,72,0	1/1:1,20:21:57.19:750,57,0	0/0:26,0:26:69.15:0,69,733	0/0:20,0:20:54.13:0,54,580	0/0:28,0:28:75.19:0,75,806	0/0:22,0:22:66.15:0,66,701	1/1:2,19:21:27.94:718,28,0	1/1:1,25:25:66.21:868,66,0	1/1:0,5:5:12.04:158,12,0
chr10	100439289	.	ATTT	A	526.89	PASS	AB=0.920;AC=3;AF=0.054;AN=56;BaseQRankSum=4.475;DP=516;FS=4.690;HRun=12;HaplotypeScore=80.9331;InbreedingCoeff=0.6680;MQ=64.96;MQ0=1;MQRankSum=-1.740;QD=12.55;ReadPosRankSum=1.295;VQSLOD=1.4806;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:51.06:621,51,0	0/0:12,0:13:36.11:0,36,659	0/1:21,0:18:5.45:5,0,241	0/0:11,0:12:19.29:0,19,275	0/0:28,0:28:78.27:0,78,1502	0/0:21,0:21:57.19:0,57,1082	0/0:19,0:20:54.19:0,54,1049	0/0:36,0:36:84.25:0,84,1524	0/0:24,0:24:63.22:0,63,1232	0/0:13,0:15:39.11:0,39,687	0/0:27,0:27:75.25:0,75,1446	0/0:8,0:9:21.04:0,21,317	0/0:9,0:9:25.64:0,26,477	0/0:15,0:17:48.11:0,48,834	0/0:19,0:19:45.13:0,45,814	0/0:23,0:24:63.19:0,63,1167	0/0:12,0:13:33.09:0,33,613	0/0:20,0:21:42.02:0,42,625	0/0:19,0:20:45.11:0,45,779	0/0:18,0:19:54.16:0,54,948	0/0:11,0:12:24.06:0,24,428	0/0:20,0:20:57.18:0,57,1069	0/0:23,0:24:66.20:0,66,1215	0/0:14,0:15:42.11:0,42,760	0/0:19,0:20:45.12:0,45,819	0/0:20,0:20:60.21:0,60,1176	0/0:11,0:12:26.73:0,27,481	0/0:3,0:3:9.03:0,9,177
chr10	100439371	.	G	GT	8816.73	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=15.305;DP=545;FS=3.746;HRun=0;HaplotypeScore=73.9704;InbreedingCoeff=0.9970;MQ=81.57;MQ0=0;MQRankSum=-2.715;QD=34.31;ReadPosRankSum=3.125;VQSLOD=4.4663;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:58.85:0,59,378	0/0:10,0:10:27.09:0,27,377	0/0:20,0:20:57.15:0,57,753	0/0:8,0:8:24.08:0,24,334	0/0:19,0:19:57.19:0,57,794	1/1:1,28:29:81.26:1060,81,0	1/1:2,13:15:35.10:467,35,0	1/1:4,20:25:67.09:861,67,0	1/1:0,25:25:66.21:861,66,0	0/0:15,0:15:42.14:0,42,586	0/0:23,0:23:62.42:0,62,845	0/0:13,0:13:39.13:0,39,545	0/0:27,0:27:75.25:0,75,1048	0/0:18,0:18:54.18:0,54,749	0/0:23,0:23:69.23:0,69,962	1/1:0,18:18:48.15:619,48,0	0/0:8,0:8:24.07:0,24,317	1/1:0,14:14:39.13:514,39,0	1/1:2,17:19:37.26:638,37,0	1/1:4,26:30:71.13:981,71,0	1/1:0,14:14:39.13:510,39,0	0/0:21,0:21:63.21:0,63,875	0/0:25,0:25:72.23:0,72,987	0/0:13,0:13:39.13:0,39,545	0/0:24,0:24:72.24:0,72,1006	1/1:2,28:30:80.12:1066,80,0	1/1:2,30:32:81.93:1045,82,0	1/1:1,5:6:15.05:194,15,0
chr10	100439977	.	C	CA	6866.93	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-15.133;DP=651;FS=1.797;HRun=9;HaplotypeScore=59.3446;InbreedingCoeff=0.9906;MQ=68.49;MQ0=0;MQRankSum=-0.139;QD=27.80;ReadPosRankSum=0.088;VQSLOD=4.7865;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,886	0/0:10,0:10:26.94:0,27,225	0/0:10,0:9:20.95:0,21,172	0/0:12,0:10:14.96:0,15,126	0/0:28,0:28:77.94:0,78,672	1/1:1,19:20:54.15:597,54,0	1/1:1,14:15:36.10:398,36,0	1/1:7,21:27:63.15:687,63,0	1/1:1,19:20:54.11:584,54,0	0/0:27,0:27:68.98:0,69,599	0/0:31,0:31:62.95:0,63,547	0/0:24,1:25:38.76:0,39,559	0/0:26,0:26:71.96:0,72,621	0/0:22,0:22:53.97:0,54,469	0/0:29,0:29:77.98:0,78,677	1/1:1,12:13:36.10:398,36,0	0/0:37,0:37:86.96:0,87,755	1/1:3,12:15:30.08:332,30,0	1/1:3,17:20:51.14:564,51,0	1/1:2,25:27:75.20:829,75,0	1/1:1,22:23:63.17:697,63,0	0/0:32,0:32:80.97:0,81,703	0/0:24,0:24:62.97:0,63,543	0/0:31,0:31:71.96:0,72,625	0/0:22,0:22:53.97:0,54,469	1/1:4,24:28:72.16:777,72,0	1/1:1,22:22:60.16:664,60,0	1/1:1,13:14:10.23:339,10,0
chr10	100440121	.	GC	G	9848.20	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=20.272;DP=653;FS=2.916;HRun=2;HaplotypeScore=82.4629;InbreedingCoeff=0.9983;MQ=60.59;MQ0=4;MQRankSum=3.640;QD=33.38;ReadPosRankSum=1.197;VQSLOD=4.9763;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:30:70.10:848,70,0	0/0:6,0:6:18.06:0,18,270	0/0:19,0:7:21.07:0,21,315	0/0:23,0:17:48.13:0,48,677	0/0:24,0:24:72.24:0,72,1079	1/1:0,19:19:54.17:664,54,0	1/1:0,18:18:48.15:597,48,0	1/1:0,25:24:71.41:832,71,0	1/1:0,21:21:63.20:781,63,0	0/0:32,0:31:93.32:0,93,1394	0/0:17,0:17:48.16:0,48,719	0/0:24,0:24:72.24:0,72,1079	0/0:23,0:23:63.21:0,63,944	0/0:27,0:27:78.26:0,78,1167	0/0:33,0:33:99:0,99,1484	1/1:0,21:21:57.18:701,57,0	0/0:36,0:36:99:0,108,1595	1/1:0,20:20:60.19:744,60,0	1/1:3,19:20:54.99:621,55,0	1/1:0,24:24:63.20:783,63,0	1/1:2,35:37:96.30:1192,96,0	0/0:18,0:18:48.16:0,48,720	0/0:18,0:18:54.17:0,54,789	0/0:28,0:28:84.28:0,84,1252	0/0:30,0:30:87.28:0,87,1284	1/1:0,19:19:57.18:712,57,0	1/1:1,24:25:72.23:888,72,0	1/1:0,13:13:39.12:484,39,0
chr10	100440584	.	G	GT	28858.75	PASS	AC=52;AF=1.000;AN=52;DP=768;FS=0.000;HRun=1;HaplotypeScore=63.6648;InbreedingCoeff=-0.0002;MQ=51.45;MQ0=3;QD=37.97;VQSLOD=5.0635;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,48:49:99:1952,132,0	1/1:0,10:9:27.09:404,27,0	./.	./.	1/1:0,32:32:84.24:1232,84,0	1/1:1,28:29:75.25:1114,75,0	1/1:1,17:18:45.15:674,45,0	1/1:6,39:42:99:1579,111,0	1/1:1,36:35:90.30:1348,90,0	1/1:0,39:39:99:1752,117,0	1/1:0,17:16:48.16:719,48,0	1/1:0,26:24:63.21:943,63,0	1/1:0,38:38:99:1616,108,0	1/1:3,31:33:81.27:1213,81,0	1/1:0,50:48:99:1888,126,0	1/1:1,28:25:63.21:944,63,0	1/1:0,20:20:57.19:854,57,0	1/1:0,10:10:20.96:315,21,0	1/1:2,19:19:48.16:719,48,0	1/1:1,36:31:75.25:1123,75,0	1/1:1,35:36:99:1483,99,0	1/1:1,32:30:81.27:1213,81,0	1/1:2,22:24:60.20:899,60,0	1/1:0,27:27:75.25:1124,75,0	1/1:1,23:24:63.21:944,63,0	1/1:0,28:24:72.23:1055,72,0	1/1:0,33:31:78.26:1169,78,0	1/1:0,13:13:39.13:584,39,0
chr10	100440937	.	C	CTA	10810.94	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-15.994;DP=568;FS=2.882;HRun=0;HaplotypeScore=63.0598;InbreedingCoeff=0.9970;MQ=84.77;MQ0=5;MQRankSum=-0.243;QD=42.56;ReadPosRankSum=0.386;VQSLOD=6.3261;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.16:0,60,807	0/0:9,0:9:21.06:0,21,282	0/0:21,0:21:40.84:0,41,525	0/0:17,0:17:51.09:0,51,653	0/0:22,0:22:51.17:0,51,729	1/1:1,26:27:63.22:1154,63,0	1/1:0,14:14:39.13:715,39,0	1/1:4,30:33:87.17:1344,87,0	1/1:1,11:12:33.11:604,33,0	0/0:15,0:15:42.13:0,42,587	0/0:17,0:17:45.12:0,45,601	0/0:26,0:26:75.23:0,75,1038	0/0:17,0:17:47.98:0,48,640	0/0:19,0:19:54.14:0,54,718	0/0:22,0:22:63.21:0,63,902	1/1:1,14:14:36.12:659,36,0	0/0:25,0:25:66.20:0,66,925	1/1:0,13:13:30.10:549,30,0	1/1:2,19:21:57.16:956,57,0	1/1:5,23:27:57.20:1042,57,0	1/1:2,30:32:78.27:1429,78,0	0/0:24,0:24:60.20:0,60,858	0/0:28,0:28:72.22:0,72,1009	0/0:10,0:10:30.08:0,30,410	0/0:20,0:20:48.15:0,48,668	1/1:1,21:22:63.22:1151,63,0	1/1:1,24:25:51.17:933,51,0	1/1:2,9:8:15.05:274,15,0
chr10	100441942	.	CA	C	3758.88	PASS	AB=0.538;AC=21;AF=0.420;AN=50;BaseQRankSum=5.082;DP=590;FS=3.479;HRun=1;HaplotypeScore=65.4498;InbreedingCoeff=0.8819;MQ=35.22;MQ0=65;MQRankSum=-4.854;QD=21.00;ReadPosRankSum=1.601;VQSLOD=3.9324;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:34:51.12:0,51,782	0/0:15,0:12:30.10:0,30,477	./.	./.	0/0:30,0:22:38.95:0,39,579	1/1:2,18:13:33.11:459,33,0	1/1:4,11:8:18.06:250,18,0	./.	1/1:1,18:14:33.11:459,33,0	0/0:32,0:24:69.22:0,69,1041	0/0:17,0:11:12.03:0,12,160	0/0:17,0:15:33.09:0,33,479	0/0:39,0:38:78.09:0,78,1131	0/0:21,0:20:36.05:0,36,543	0/0:34,0:31:57.18:0,57,882	1/1:2,26:18:45.15:626,45,0	0/0:25,0:23:47.97:0,48,695	1/1:1,5:5:12.04:167,12,0	1/1:2,6:6:18.06:251,18,0	1/1:1,23:22:42.09:557,42,0	1/1:4,5:5:8.99:103,9,0	0/0:30,0:21:27.09:0,27,420	0/0:33,0:28:42.11:0,42,644	0/0:28,0:24:42.10:0,42,639	0/0:32,0:28:59.91:0,60,929	0/1:2,12:11:14.57:385,0,15	1/1:1,28:19:30.10:418,30,0	1/1:5,2:2:6.02:83,6,0
chr10	100443918	.	A	AT	1751.85	PASS	AB=0.769;AC=24;AF=0.429;AN=56;BaseQRankSum=-1.464;DP=496;FS=2.342;HRun=14;HaplotypeScore=68.7252;InbreedingCoeff=0.5530;MQ=68.51;MQ0=11;MQRankSum=-2.059;QD=7.27;ReadPosRankSum=-2.983;VQSLOD=2.0439;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:4.82:0,5,152	0/0:4,0:4:8.86:0,9,58	0/0:15,1:14:4.05:0,4,17	0/0:11,0:10:8.66:0,9,55	0/0:20,0:21:27.47:0,27,165	1/1:10,12:23:0.03:210,0,0	1/1:9,12:22:8.92:187,9,0	0/1:15,12:26:13.04:246,0,13	1/1:3,7:10:12:105,12,0	0/0:20,0:22:33.48:0,33,202	0/0:12,0:12:26.52:0,27,172	0/0:13,0:13:17.60:0,18,115	0/0:18,0:18:20.52:0,21,134	0/0:21,0:23:29:0,29,170	0/0:12,0:12:8.69:0,9,56	1/1:4,7:10:20.79:165,21,0	0/1:36,6:42:59.89:60,0,229	1/1:3,7:11:11.97:101,12,0	0/1:12,13:25:2.60:219,0,3	1/1:4,7:12:24.26:192,24,0	1/1:2,4:7:5.16:73,5,0	0/1:10,2:11:14.62:15,0,46	0/0:17,1:18:28.87:0,29,191	0/0:22,0:20:31.89:0,32,211	0/0:16,0:16:3.19:0,3,147	1/1:7,9:16:26.97:232,27,0	1/1:7,6:14:14.55:114,15,0	1/1:2,1:2:3:26,3,0
chr10	100445062	.	C	CTGTG	4687.24	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=4.028;DP=594;FS=3.760;HRun=0;HaplotypeScore=117.7384;InbreedingCoeff=0.9351;MQ=56.54;MQ0=19;MQRankSum=-1.046;QD=20.20;ReadPosRankSum=-2.879;VQSLOD=4.2276;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:81.25:0,81,1244	0/0:5,0:5:12.04:0,12,163	0/0:38,0:9:12.96:0,13,66	0/0:52,0:23:24.48:0,24,212	0/0:15,0:15:30.10:0,30,487	1/1:20,0:20:32.57:462,33,0	1/1:21,0:21:18.97:148,19,0	1/1:21,0:20:32.70:453,33,0	1/1:5,6:11:3.01:63,3,0	0/0:28,0:28:56.90:0,57,777	0/0:16,0:17:33.40:0,33,425	0/0:13,0:13:27.08:0,27,408	0/0:15,0:17:40.01:0,40,579	0/0:18,0:18:34.67:0,35,628	0/0:16,0:17:39.11:0,39,581	1/1:3,5:8:12.03:199,12,0	0/0:24,0:23:54.44:0,54,874	1/1:20,2:22:42.05:719,42,0	1/1:17,1:18:17.10:467,17,0	1/1:18,3:21:22.93:294,23,0	1/1:28,0:28:33.30:447,33,0	0/0:20,0:20:50.72:0,51,720	0/0:6,0:6:2.74:0,3,12	0/0:31,0:32:59.74:0,60,971	0/0:21,0:21:23.49:0,23,685	1/1:28,1:31:50.34:753,50,0	1/1:16,2:18:25.70:344,26,0	1/1:11,1:13:24.03:338,24,0
chr10	100445080	.	GTC	G	1742.90	PASS	AB=0.975;AC=24;AF=0.429;AN=56;BaseQRankSum=4.913;DP=632;FS=1.148;HRun=0;HaplotypeScore=105.1274;InbreedingCoeff=-0.4129;MQ=53.79;MQ0=24;MQRankSum=-0.219;QD=3.47;ReadPosRankSum=-4.663;VQSLOD=0.8205;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:85.08:0,85,1397	0/1:8,0:8:7.47:7,0,99	0/1:35,0:8:23.05:24,0,23	0/1:40,0:14:9.35:9,0,35	0/1:19,0:18:30.20:30,0,408	0/1:15,0:15:30.95:160,0,31	1/1:24,0:24:0.45:174,0,0	0/1:7,18:25:24.19:314,0,24	1/1:15,0:14:11.29:72,11,0	0/1:37,0:35:7.76:8,0,640	0/1:19,0:19:2.17:2,0,376	0/1:15,0:15:10.43:10,0,410	0/0:18,0:18:26.17:0,26,473	0/1:21,0:21:25.79:26,0,431	0/0:17,0:17:16.96:0,17,518	0/1:9,0:9:10.88:29,0,11	0/1:23,1:23:2.65:3,0,717	0/1:22,0:22:56.80:121,0,57	0/1:22,0:21:59.35:59,0,150	0/1:20,0:20:17.35:124,0,17	0/1:33,0:32:1.64:200,0,2	0/0:23,0:23:12.46:0,12,563	0/0:8,0:8:3.82:0,4,57	0/1:36,2:37:23.18:23,0,933	0/0:23,0:23:25.15:0,25,535	0/1:28,0:28:30.63:234,0,31	0/1:18,0:18:56.74:158,0,57	0/1:15,0:15:46.65:109,0,47
chr10	100445082	.	C	CTGTG	3220.05	PASS	AB=0.962;AC=24;AF=0.429;AN=56;BaseQRankSum=3.722;DP=634;FS=3.053;HRun=0;HaplotypeScore=129.7066;InbreedingCoeff=0.8547;MQ=53.92;MQ0=25;MQRankSum=-4.399;QD=11.26;ReadPosRankSum=-3.601;VQSLOD=1.9933;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:72.54:0,73,1081	0/0:8,0:8:9:0,9,103	0/0:33,0:6:2.97:0,3,20	0/1:39,0:13:0:0,0,0	0/0:19,0:18:17.02:0,17,398	1/1:15,1:16:12.49:193,12,0	0/1:22,0:24:5.39:192,0,5	1/1:27,0:27:20.62:134,21,0	1/1:15,0:14:9.02:113,9,0	0/0:33,0:33:12.18:0,12,421	0/0:17,0:18:22.77:0,23,281	0/0:14,0:14:25.81:0,26,371	0/0:18,0:18:21.05:0,21,319	0/0:20,0:22:41.89:0,42,478	0/0:14,0:16:30.09:0,30,453	1/1:4,4:9:9.50:142,9,0	0/0:23,0:24:44.82:0,45,627	1/1:17,2:20:38.14:524,38,0	1/1:21,0:21:15.05:229,15,0	1/1:17,2:19:25.10:276,25,0	1/1:35,0:33:26.93:281,27,0	0/0:20,0:23:24.12:0,24,511	0/0:9,0:9:15.05:0,15,198	0/0:41,0:40:74.80:0,75,1016	0/0:22,0:23:29.96:0,30,352	1/1:25,2:27:27.45:419,27,0	1/1:18,0:18:35.42:442,35,0	1/1:13,1:15:31.09:486,31,0
chr10	100445147	.	AATGTATGTATGT	A	2993.53	PASS	AC=20;AF=0.385;AN=52;BaseQRankSum=7.676;DP=571;FS=12.587;HRun=0;HaplotypeScore=190.3717;InbreedingCoeff=0.8325;MQ=59.43;MQ0=7;MQRankSum=-6.485;QD=16.72;ReadPosRankSum=-2.524;VQSLOD=1.6088;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:34:39.13:0,39,953	0/0:8,0:8:18.06:0,18,953	0/0:28,0:10:1.36:0,1,3	0/0:26,0:9:2.99:0,3,59	0/0:21,0:21:42.14:0,42,2328	1/1:6,17:23:14.95:250,15,0	./.	1/1:18,0:16:8.99:183,9,0	1/1:3,14:17:12:330,12,0	0/0:30,0:32:57.20:0,57,3041	0/0:18,0:20:51.18:0,51,2491	0/0:22,0:22:54.19:0,54,2786	0/0:17,0:17:42.14:0,42,2450	0/0:19,0:19:42.14:0,42,2178	0/0:14,0:14:27.09:0,27,1578	1/1:2,12:14:8.96:113,9,0	0/0:9,0:20:30.08:0,30,655	./.	1/1:10,0:13:4.61:11,5,0	1/1:7,12:20:11.58:81,12,0	1/1:16,1:17:2.73:24,3,0	0/0:22,0:22:57.20:0,57,3032	0/0:20,0:20:39.13:0,39,1857	0/0:30,0:29:36.12:0,36,1925	0/0:21,0:21:45.15:0,45,2323	1/1:7,22:29:66.10:1786,66,0	1/1:10,8:18:12:330,12,0	1/1:9,1:10:3.01:76,3,0
chr10	100446998	.	T	TG	634.83	PASS	AB=0.961;AC=22;AF=0.393;AN=56;BaseQRankSum=10.173;DP=560;FS=12.173;HRun=10;HaplotypeScore=116.7030;InbreedingCoeff=0.3190;MQ=74.90;MQ0=1;MQRankSum=-2.297;QD=2.00;ReadPosRankSum=-0.921;VQSLOD=-0.5008;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:8.91:0,9,74	0/0:7,0:7:5.97:0,6,49	0/0:33,0:20:25.47:0,25,227	0/1:33,0:24:14.31:14,0,80	0/0:19,0:21:31:0,31,233	0/1:26,0:26:19.76:56,0,20	1/1:24,0:24:20.54:155,21,0	1/1:25,1:25:8.82:102,9,0	0/1:13,0:14:29.91:33,0,30	0/1:22,0:22:14.04:14,0,105	0/0:20,0:22:34.01:0,34,258	0/1:12,0:12:0.19:0,0,145	0/0:14,0:14:23.93:0,24,197	0/1:12,5:17:0.01:0,0,0	0/0:20,0:20:26.83:0,27,221	1/1:6,0:6:4.99:18,5,0	0/0:22,0:22:35.85:0,36,289	1/1:13,0:13:15.95:73,16,0	0/1:13,0:14:4.16:25,0,4	1/1:26,1:27:22.11:108,22,0	0/1:24,0:24:1.01:53,0,1	0/0:15,0:15:26.95:0,27,221	0/0:22,0:22:21.37:0,21,173	0/0:26,0:27:46.91:0,47,375	0/0:16,0:16:0.87:0,1,84	1/1:18,0:20:12:57,12,0	0/1:31,0:32:13.09:87,0,13	0/1:6,0:6:13.61:17,0,14
chr10	100447007	.	G	GGA	4882.31	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-6.677;DP=531;FS=1.867;HRun=0;HaplotypeScore=86.1566;InbreedingCoeff=0.9286;MQ=69.31;MQ0=1;MQRankSum=1.041;QD=21.60;ReadPosRankSum=1.199;VQSLOD=5.2947;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:38.54:0,39,302	0/0:7,0:7:18.02:0,18,181	0/0:36,0:18:39.31:0,39,422	0/0:36,0:19:2.44:0,2,147	0/0:22,0:22:54:0,54,541	1/1:2,24:26:30.10:486,30,0	1/1:12,8:23:56.76:746,57,0	1/1:21,5:26:65.96:721,66,0	1/1:4,9:14:15.05:244,15,0	0/0:18,0:18:14.15:0,14,297	0/0:16,0:16:42.04:0,42,481	0/0:12,0:12:27.48:0,27,303	0/0:17,0:17:47.01:0,47,476	0/0:9,0:9:5.83:0,6,40	0/0:17,0:17:44.83:0,45,493	1/1:0,5:5:6.02:99,6,0	0/0:23,0:23:64.11:0,64,677	1/1:5,3:10:26.92:316,27,0	1/1:2,14:15:38.96:415,39,0	1/1:7,1:26:32.84:380,33,0	1/1:7,19:26:21.45:392,21,0	0/0:13,0:13:27.08:0,27,338	0/0:20,0:20:51.04:0,51,535	0/0:29,0:28:72:0,72,795	0/0:13,0:13:26.85:0,27,269	1/1:3,10:15:33.03:348,33,0	1/1:6,23:31:41.70:588,42,0	1/1:1,4:5:9.03:149,9,0
chr10	100447191	.	C	CAG	11107.88	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=9.876;DP=750;FS=17.044;HRun=0;HaplotypeScore=122.6945;InbreedingCoeff=0.9930;MQ=66.35;MQ0=9;MQRankSum=0.201;QD=36.54;ReadPosRankSum=-0.948;VQSLOD=5.2602;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:66.73:0,67,1027	0/0:7,0:7:15.05:0,15,195	0/0:45,0:27:54.65:0,55,612	0/0:56,0:29:37.64:0,38,416	0/0:26,0:26:66.20:0,66,842	1/1:4,19:22:42.14:714,42,0	1/1:9,14:23:55.01:861,55,0	1/1:6,45:50:99:2122,138,0	1/1:5,12:18:39.12:648,39,0	0/0:28,0:28:69.21:0,69,874	0/0:18,0:18:54.18:0,54,699	0/0:25,0:25:66.20:0,66,842	0/0:19,0:19:54.18:0,54,701	0/0:27,0:27:69.20:0,69,880	0/0:33,0:33:78.21:0,78,971	1/1:4,17:22:48.16:801,48,0	0/0:30,0:30:67.37:0,67,876	1/1:5,11:16:41.17:663,41,0	1/1:4,21:22:51.16:833,51,0	1/1:5,19:25:51.12:824,51,0	1/1:8,13:21:11.73:681,12,0	0/0:20,0:20:54.16:0,54,689	0/0:20,0:20:60.19:0,60,779	0/0:32,0:31:63.19:0,63,803	0/0:24,0:24:66.18:0,66,829	1/1:5,27:32:42.21:1232,42,0	1/1:7,31:38:75.15:1271,75,0	1/1:0,9:9:27.09:459,27,0
chr10	100447371	.	C	CAGAG	11019.14	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=3.254;DP=895;FS=0.717;HRun=0;HaplotypeScore=142.7534;InbreedingCoeff=0.9613;MQ=64.08;MQ0=15;MQRankSum=-2.452;QD=29.78;ReadPosRankSum=-3.060;VQSLOD=4.4006;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:69.33:0,69,1129	0/0:12,0:12:24.06:0,24,379	0/0:66,0:16:14.91:0,15,192	0/0:88,0:36:18.72:0,19,138	0/0:27,0:27:60.16:0,60,941	1/1:2,24:25:30.10:761,30,0	1/1:1,28:31:15.59:319,16,0	1/1:56,0:56:86.31:1330,86,0	1/1:1,24:25:42.14:1055,42,0	0/0:32,0:32:78.11:0,78,1263	0/0:27,0:27:59.91:0,60,980	0/0:20,0:20:54.17:0,54,897	0/0:19,0:19:54.15:0,54,870	0/0:25,0:25:63.18:0,63,1028	0/0:32,0:32:78.27:0,78,1332	1/1:1,23:23:45.15:1142,45,0	0/0:28,0:28:17.26:0,17,860	1/1:6,21:27:1.50:818,2,0	1/1:7,12:17:38.98:588,39,0	1/1:7,30:37:36.11:876,36,0	1/1:5,35:39:30.57:725,31,0	0/0:31,0:31:75.23:0,75,1239	0/0:32,0:32:77.21:0,77,1182	0/0:29,0:29:66.04:0,66,1106	0/0:23,0:23:54.17:0,54,899	1/1:11,30:41:45.11:1931,45,0	1/1:3,28:33:45.09:1083,45,0	1/1:1,8:9:17.55:389,18,0
chr10	100447381	.	GAC	G	1170.43	PASS	AB=0.874;AC=3;AF=0.054;AN=56;BaseQRankSum=0.584;DP=821;FS=6.776;HRun=0;HaplotypeScore=137.6379;InbreedingCoeff=-0.0689;MQ=58.92;MQ0=14;MQRankSum=2.174;QD=11.59;ReadPosRankSum=-4.481;VQSLOD=1.9843;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:73.05:0,73,1289	0/0:12,0:12:33.06:0,33,523	0/0:53,0:9:14.04:0,14,224	0/0:70,0:24:14.91:0,15,151	0/0:24,0:24:63.18:0,63,1126	0/0:24,1:24:34.91:0,35,259	0/0:29,0:29:10.58:0,11,97	0/1:27,25:51:99:620,0,465	0/0:24,0:24:44.84:0,45,346	0/0:30,0:30:90.26:0,90,1554	0/0:24,0:24:66.16:0,66,1104	0/0:20,0:20:60.16:0,60,1030	0/0:18,0:18:54.16:0,54,978	0/0:23,0:23:69.21:0,69,1239	0/0:31,0:31:93.27:0,93,1630	0/0:22,0:21:44.82:0,45,344	0/0:24,0:24:20.10:0,20,995	0/0:27,0:26:19.88:0,20,278	0/1:17,1:14:99:161,0,148	0/0:32,0:32:1.11:0,1,268	0/0:35,1:35:33.11:0,33,241	0/0:31,0:31:87.22:0,87,1464	0/0:32,0:32:89.42:0,89,1453	0/0:31,0:31:72.22:0,72,1282	0/0:23,0:23:60.17:0,60,1079	0/1:31,0:31:99:489,0,335	0/0:33,0:33:30.78:0,31,369	0/0:13,0:13:29.84:0,30,268
chr10	100448056	.	AAC	A	4557.79	PASS	AB=0.747;AC=24;AF=0.429;AN=56;BaseQRankSum=9.798;DP=499;FS=0.586;HRun=0;HaplotypeScore=55.7419;InbreedingCoeff=0.8779;MQ=63.15;MQ0=13;MQRankSum=1.251;QD=21.50;ReadPosRankSum=3.391;VQSLOD=5.0996;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:81.22:0,81,1248	0/0:4,0:4:12.04:0,12,198	0/0:54,0:16:26.07:0,26,353	0/0:42,0:15:23.58:0,24,350	0/0:16,0:16:45.15:0,45,736	1/1:0,14:14:18.06:225,18,0	1/1:6,7:13:15.05:188,15,0	1/1:4,18:21:48.10:549,48,0	1/1:2,20:22:48.10:600,48,0	0/0:19,1:20:22.66:0,23,876	0/0:13,0:13:30.10:0,30,495	0/0:16,1:17:7.65:0,8,656	0/0:16,0:16:36.12:0,36,590	0/0:6,0:6:15.05:0,15,238	0/1:11,1:12:4.43:4,0,438	1/1:3,13:16:30.10:375,30,0	0/0:11,0:11:30.10:0,30,492	1/1:2,12:14:20.81:259,21,0	1/1:3,12:15:36.02:401,36,0	1/1:4,11:15:30.02:341,30,0	1/1:4,24:28:51.16:638,51,0	0/0:12,0:12:33.11:0,33,537	0/0:13,0:14:29.95:0,30,430	0/0:16,0:16:36.10:0,36,564	0/0:11,0:11:21.07:0,21,347	0/1:5,15:19:1.67:489,0,2	1/1:6,10:16:24.08:300,24,0	1/1:0,5:5:15.05:188,15,0
chr10	100448368	.	AAC	A	2981.69	PASS	AB=0.832;AC=32;AF=0.615;AN=52;BaseQRankSum=7.378;DP=535;FS=7.603;HRun=0;HaplotypeScore=75.0356;InbreedingCoeff=0.1403;MQ=68.06;MQ0=9;MQRankSum=-0.404;QD=7.33;ReadPosRankSum=-0.294;VQSLOD=2.0604;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:20:4.40:19,4,0	0/1:6,1:8:29.39:29,0,112	./.	./.	0/1:11,2:13:15.73:16,0,171	1/1:10,12:22:21.52:234,22,0	1/1:10,11:22:26.74:261,27,0	1/1:13,5:18:18.04:190,18,0	1/1:8,15:23:41.78:446,42,0	0/0:19,0:19:10.77:0,11,304	0/0:12,0:12:14.41:0,14,187	0/0:18,0:18:28.39:0,28,426	0/0:15,0:15:27.02:0,27,341	0/1:17,1:18:20.30:20,0,286	0/1:20,6:26:96.10:96,0,451	1/1:9,14:23:38.94:413,39,0	0/1:26,2:29:8.46:8,0,422	0/1:5,5:10:51.96:115,0,52	1/1:5,1:7:8.82:68,9,0	1/1:9,4:15:14.70:128,15,0	0/1:14,11:27:12.89:238,0,13	0/1:12,2:14:45.49:45,0,169	0/1:11,1:12:21.23:21,0,124	0/1:26,4:30:86.32:86,0,450	0/0:11,0:11:9.03:0,9,136	1/1:6,3:13:20.39:156,20,0	1/1:12,17:30:5.34:421,5,0	1/1:10,5:18:19.58:148,20,0
chr10	100450288	.	C	CA	9328.99	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=18.338;DP=710;FS=3.898;HRun=3;HaplotypeScore=110.5541;InbreedingCoeff=0.9971;MQ=88.11;MQ0=0;MQRankSum=-3.724;QD=35.07;ReadPosRankSum=2.300;VQSLOD=4.6350;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,168,1973	0/0:10,0:10:27.08:0,27,324	0/0:20,0:20:44.37:0,44,524	0/0:30,0:30:83.44:0,83,950	0/0:35,0:35:99:0,102,1223	1/1:0,20:20:42.14:587,42,0	1/1:0,27:27:69.23:966,69,0	1/1:2,27:29:81.27:1132,81,0	1/1:0,18:18:51.17:714,51,0	0/0:32,0:32:87.26:0,87,1035	0/0:24,0:24:63.19:0,63,756	0/0:30,0:30:84.24:0,84,996	0/0:27,0:27:78.23:0,78,925	0/0:22,0:22:60.17:0,60,709	0/0:24,0:24:63.18:0,63,744	1/1:3,21:24:60.20:839,60,0	0/0:22,0:22:63.19:0,63,755	1/1:2,16:18:39.13:546,39,0	1/1:4,23:27:69.20:934,69,0	1/1:1,31:32:90.30:1255,90,0	1/1:2,5:7:15.05:210,15,0	0/0:26,0:26:75.21:0,75,877	0/0:31,0:31:93.28:0,93,1107	0/0:38,0:38:99:0,105,1219	0/0:15,0:15:45.14:0,45,540	1/1:2,18:20:21.19:719,21,0	1/1:4,20:24:48.16:671,48,0	1/1:0,20:20:54.18:756,54,0
chr10	100451347	.	T	TTTTC	4421.06	PASS	AB=0.833;AC=27;AF=0.519;AN=52;BaseQRankSum=-8.325;DP=456;FS=0.000;HRun=0;HaplotypeScore=81.8015;InbreedingCoeff=0.8189;MQ=70.89;MQ0=3;MQRankSum=0.039;QD=21.67;ReadPosRankSum=-2.644;VQSLOD=3.5557;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:29:39.95:0,40,357	1/1:3,4:8:12.04:280,12,0	./.	./.	1/1:6,9:15:18.06:386,18,0	0/0:4,0:10:12.01:0,12,112	0/0:5,0:8:6.01:0,6,56	1/1:31,0:30:11.99:126,12,0	0/0:5,0:15:24.03:0,24,224	1/1:13,9:22:30.10:698,30,0	1/1:4,8:12:15.05:316,15,0	1/1:12,2:14:9.03:210,9,0	1/1:8,0:12:9.03:156,9,0	1/1:4,4:9:9.03:207,9,0	1/1:6,8:14:15.05:351,15,0	0/0:9,0:17:27.04:0,27,270	0/0:28,0:27:33.06:0,33,437	0/0:7,0:11:3:0,3,28	0/0:24,0:24:15.05:0,15,230	0/0:26,0:26:51.15:0,51,729	0/1:8,2:10:40.11:64,0,40	1/1:4,4:8:18.06:385,18,0	1/1:7,6:13:15.05:350,15,0	1/1:13,5:18:21.07:470,21,0	1/1:8,10:18:18.06:421,18,0	0/0:17,0:17:19.33:0,19,377	0/0:26,0:26:42.13:0,42,622	0/0:7,0:6:9.03:0,9,138
chr10	100451459	.	AG	A	6357.39	PASS	AC=50;AF=0.962;AN=52;BaseQRankSum=-2.421;DP=235;FS=0.000;HRun=2;HaplotypeScore=25.7518;InbreedingCoeff=0.5570;MQ=51.21;MQ0=5;MQRankSum=-0.932;QD=29.16;ReadPosRankSum=1.452;VQSLOD=4.1772;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:39.13:505,39,0	1/1:0,3:3:6.02:78,6,0	./.	0/0:8,1:2:6.01:0,6,69	1/1:1,11:11:18.06:231,18,0	1/1:0,5:5:15.05:194,15,0	1/1:0,8:8:18.06:232,18,0	1/1:0,15:15:42:486,42,0	1/1:0,10:10:27.09:350,27,0	1/1:0,3:3:9.03:117,9,0	1/1:1,4:5:9.03:116,9,0	1/1:0,10:9:24.01:289,24,0	1/1:0,14:13:27.09:348,27,0	1/1:0,5:5:15.05:195,15,0	1/1:0,8:7:21.07:272,21,0	1/1:1,13:14:30.10:389,30,0	1/1:0,12:12:36.12:467,36,0	1/1:2,2:4:8.98:83,9,0	1/1:1,2:3:6:62,6,0	1/1:0,9:9:18.06:233,18,0	1/1:0,6:6:15.05:194,15,0	1/1:0,9:8:18.06:233,18,0	1/1:1,9:9:18.06:233,18,0	1/1:0,9:9:18.06:233,18,0	1/1:0,8:8:21.03:253,21,0	1/1:0,9:7:21.03:254,21,0	1/1:0,10:10:23.89:310,24,0	./.
chr10	100451727	.	TC	T	7988.78	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-1.304;DP=386;FS=2.548;HRun=4;HaplotypeScore=74.3482;InbreedingCoeff=0.5344;MQ=37.25;MQ0=6;MQRankSum=-2.643;QD=21.08;ReadPosRankSum=1.815;VQSLOD=4.2060;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:12.03:137,12,0	1/1:0,3:3:6.02:72,6,0	0/0:7,0:2:5.98:0,6,57	0/1:5,0:2:1.48:1,0,37	1/1:0,19:19:36.11:423,36,0	1/1:1,18:19:36.11:426,36,0	1/1:4,23:21:36.11:426,36,0	1/1:4,16:17:33.10:394,33,0	1/1:0,16:14:30.09:359,30,0	1/1:0,13:13:39.12:467,39,0	1/1:0,14:14:24.07:274,24,0	1/1:1,21:21:30.09:359,30,0	1/1:0,24:24:48.14:569,48,0	1/1:0,21:19:27.08:323,27,0	1/1:1,22:22:39.12:465,39,0	1/1:2,9:11:24.07:287,24,0	1/1:1,13:14:21.06:245,21,0	1/1:1,4:5:9.03:108,9,0	1/1:3,12:14:30.09:360,30,0	1/1:0,18:18:33.10:389,33,0	1/1:0,3:2:6.02:72,6,0	1/1:1,13:13:18.06:215,18,0	1/1:0,13:12:18.06:215,18,0	1/1:2,5:7:15.05:180,15,0	1/1:2,6:8:12.04:144,12,0	1/1:1,19:20:57.17:683,57,0	1/1:1,11:12:30.09:359,30,0	1/1:0,5:5:3.01:36,3,0
chr10	100452664	.	T	TGGAAAGGAGACA	34645.35	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-3.612;DP=636;FS=0.321;HRun=0;HaplotypeScore=195.7219;InbreedingCoeff=0.9740;MQ=81.75;MQ0=1;MQRankSum=-18.267;QD=131.73;ReadPosRankSum=-1.813;VQSLOD=4.2056;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,4265	0/0:9,0:9:24.08:0,24,874	0/0:19,0:19:45.15:0,45,1520	0/0:24,0:24:46.03:0,46,1261	0/0:16,0:16:42.12:0,42,1345	1/1:15,13:28:66.23:3776,66,0	1/1:13,6:23:48.16:2871,48,0	1/1:26,5:35:99:4558,102,0	1/1:8,19:29:78.27:4539,78,0	0/0:24,0:23:63.22:0,63,2322	0/0:8,0:8:21.07:0,21,783	0/0:23,0:23:69.24:0,69,2442	0/0:17,0:17:48.16:0,48,1745	0/0:38,0:38:99:0,111,3948	0/0:38,0:38:99:0,108,3893	1/1:16,12:30:78.27:4335,78,0	0/0:35,0:34:99:0,105,3767	1/1:5,3:9:21.07:1241,21,0	1/1:9,3:14:27.08:1170,27,0	1/1:11,11:23:57.12:2978,57,0	1/1:11,6:25:39.13:2273,39,0	0/0:17,0:17:48.16:0,48,1673	0/0:18,0:18:39.13:0,39,1436	0/0:21,0:21:63.22:0,63,2148	0/0:24,0:24:66.23:0,66,2421	1/1:9,15:26:72.23:3751,72,0	1/1:9,8:18:51.18:3097,51,0	1/1:1,0:1:3.01:57,3,0
chr10	100453604	.	A	AGG	4598.39	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=14.669;DP=396;FS=65.725;HRun=0;HaplotypeScore=93.1848;InbreedingCoeff=0.9685;MQ=82.09;MQ0=0;MQRankSum=-14.433;QD=38.32;ReadPosRankSum=2.092;VQSLOD=1.5345;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:48.16:0,48,770	0/0:11,0:11:30.57:0,31,494	0/0:14,0:13:36.12:0,36,559	0/0:18,0:18:27.21:0,27,514	0/0:24,0:24:69.07:0,69,1085	1/1:0,13:13:39.13:543,39,0	1/1:0,7:7:18.06:245,18,0	1/1:1,10:11:33.11:469,33,0	1/1:2,9:11:27.09:365,27,0	0/0:17,0:17:51.17:0,51,832	0/0:16,0:16:48.16:0,48,782	0/0:16,0:16:48.16:0,48,781	0/0:18,0:18:54.18:0,54,878	0/0:15,0:15:45.15:0,45,734	0/0:20,0:19:60.20:0,60,979	1/1:1,11:12:30.10:412,30,0	0/0:18,0:18:51.17:0,51,820	1/1:1,4:5:12.04:172,12,0	1/1:1,6:7:21.03:266,21,0	1/1:1,14:15:45.15:631,45,0	1/1:0,1:1:3.01:41,3,0	0/0:14,0:14:42.14:0,42,685	0/0:18,0:18:54.18:0,54,878	0/0:15,0:15:39.13:0,39,598	0/0:23,0:23:69.24:0,69,1125	1/1:0,13:13:36.12:502,36,0	1/1:1,17:18:48.16:658,48,0	1/1:0,7:7:21.07:294,21,0
chr10	100453605	.	T	TA	2444.29	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=14.680;DP=399;FS=70.626;HRun=1;HaplotypeScore=94.6129;InbreedingCoeff=0.9673;MQ=83.27;MQ0=0;MQRankSum=-14.360;QD=20.37;ReadPosRankSum=2.303;VQSLOD=-0.1354;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.11:0,51,671	0/0:11,0:11:33.10:0,33,446	0/0:15,0:14:38.20:0,38,456	0/0:19,0:19:21.34:0,21,398	0/0:24,0:24:69.12:0,69,893	1/1:0,13:13:38.65:319,39,0	1/1:0,7:7:17.99:154,18,0	1/1:3,10:13:29.99:263,30,0	1/1:1,9:10:23.96:202,24,0	0/0:17,0:17:51.17:0,51,713	0/0:17,0:17:48.15:0,48,657	0/0:16,0:16:48.15:0,48,656	0/0:18,0:18:54.17:0,54,740	0/0:15,0:15:45.15:0,45,629	0/0:20,0:19:60.20:0,60,839	1/1:0,11:11:29.89:241,30,0	0/0:18,0:18:51.13:0,51,689	1/1:2,4:6:12.01:112,12,0	1/1:0,6:6:17.99:154,18,0	1/1:1,14:15:38.76:298,39,0	1/1:0,1:1:3:26,3,0	0/0:14,0:14:42.14:0,42,587	0/0:18,0:18:54.18:0,54,755	0/0:15,0:15:40.24:0,40,481	0/0:23,0:23:69.23:0,69,964	1/1:0,13:13:35.98:313,36,0	1/1:0,17:17:47.93:410,48,0	1/1:1,7:8:20.96:176,21,0
chr10	100453636	.	ATTCCTC	A	2589.12	PASS	AB=1.000;AC=21;AF=0.389;AN=54;BaseQRankSum=6.002;DP=428;FS=54.125;HRun=0;HaplotypeScore=122.8822;InbreedingCoeff=0.8371;MQ=78.00;MQ0=12;MQRankSum=-6.558;QD=19.61;ReadPosRankSum=-1.911;VQSLOD=1.0576;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.11:0,45,882	0/0:11,0:11:16.41:0,16,405	0/0:44,0:17:42.79:0,43,562	0/0:59,0:29:71.68:0,72,1007	0/0:19,0:18:50.81:0,51,883	1/1:13,0:14:12.59:115,13,0	./.	1/1:30,0:30:75.43:1044,75,0	1/1:5,4:10:12.04:206,12,0	0/0:14,0:15:41.93:0,42,1058	0/0:11,0:11:30.10:0,30,619	0/0:10,0:10:27.09:0,27,649	0/0:14,0:14:42.14:0,42,904	0/0:10,0:10:30.10:0,30,720	0/0:15,0:15:45.15:0,45,933	1/1:10,0:10:6.02:73,6,0	0/0:9,0:9:27.02:0,27,469	0/1:4,0:4:34.22:34,0,34	1/1:11,0:11:21.02:275,21,0	1/1:11,0:11:3.01:47,3,0	1/1:4,0:4:3.01:47,3,0	0/0:11,0:11:27.09:0,27,516	0/0:13,0:13:36.05:0,36,529	0/0:9,0:9:18.06:0,18,383	0/0:20,0:20:54.17:0,54,990	1/1:14,0:14:26.28:381,26,0	1/1:15,0:16:27.09:346,27,0	1/1:7,0:7:17.56:225,18,0
chr10	100453637	.	TTC	T	2849.59	PASS	AC=22;AF=0.407;AN=54;BaseQRankSum=5.101;DP=411;FS=52.314;HRun=0;HaplotypeScore=89.4550;InbreedingCoeff=0.9073;MQ=79.21;MQ0=12;MQRankSum=-7.309;QD=24.78;ReadPosRankSum=-2.622;VQSLOD=1.7123;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.11:0,45,692	0/0:12,0:12:33.06:0,33,456	0/0:44,0:17:39.39:0,39,556	0/0:59,0:29:70.55:0,71,1006	0/0:19,0:18:50.81:0,51,791	1/1:7,6:13:18.06:278,18,0	./.	1/1:0,27:27:79.01:1088,79,0	1/1:5,3:8:12.03:143,12,0	0/0:15,0:15:41.60:0,42,771	0/0:11,0:11:30.10:0,30,527	0/0:9,0:9:27.09:0,27,477	0/0:15,0:15:41.49:0,41,708	0/0:10,0:10:30.10:0,30,531	0/0:15,0:15:45.15:0,45,763	1/1:2,8:9:6.02:73,6,0	0/0:9,0:9:26.98:0,27,364	1/1:1,2:3:5.95:58,6,0	1/1:5,4:9:21.07:305,21,0	1/1:1,8:9:3.01:47,3,0	1/1:3,0:3:3.01:47,3,0	0/0:10,0:10:27.05:0,27,470	0/0:13,0:13:36.05:0,36,529	0/0:8,0:8:18.06:0,18,285	0/0:20,0:20:54.17:0,54,891	1/1:1,10:11:30.10:397,30,0	1/1:2,13:15:27.09:346,27,0	1/1:2,5:7:21.07:274,21,0
chr10	100453708	.	GTA	G	1109.32	PASS	AB=0.942;AC=30;AF=0.536;AN=56;BaseQRankSum=11.951;DP=492;FS=41.667;HRun=0;HaplotypeScore=94.5644;InbreedingCoeff=0.2899;MQ=47.19;MQ0=37;MQRankSum=-5.312;QD=3.49;ReadPosRankSum=-2.940;VQSLOD=-0.2997;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:22:33.55:34,0,96	0/1:7,0:7:42.37:42,0,94	0/1:24,0:8:4.06:4,0,63	0/0:33,0:15:14.71:0,15,240	0/0:26,0:26:32.80:0,33,572	1/1:23,0:20:11.91:91,12,0	1/1:15,0:11:3.17:8,3,0	1/1:36,0:29:42.59:331,43,0	1/1:14,0:14:2.99:24,3,0	0/1:11,3:14:28.80:29,0,343	0/0:16,0:16:22.45:0,22,411	0/0:21,0:18:26.37:0,26,413	0/1:10,0:8:34.29:34,0,122	0/0:11,0:11:2.12:0,2,278	0/0:14,0:13:10.48:0,10,308	1/1:17,0:15:5.99:48,6,0	0/1:18,0:16:40.18:40,0,243	0/1:6,4:6:6.51:51,0,7	1/1:27,0:25:1.52:235,2,0	1/1:21,0:19:3.94:27,4,0	1/1:11,0:8:2.99:24,3,0	0/0:17,0:16:38.92:0,39,420	0/0:19,0:19:48.04:0,48,558	0/1:14,0:14:4.69:5,0,208	0/0:17,0:17:45.05:0,45,527	1/1:13,0:12:21.99:147,22,0	1/1:11,0:11:9.33:56,9,0	1/1:7,0:6:8.40:61,8,0
chr10	100453710	.	ATGTGTG	A	1123.87	PASS	AB=0.965;AC=14;AF=0.250;AN=56;BaseQRankSum=4.917;DP=507;FS=9.082;HRun=0;HaplotypeScore=121.7065;InbreedingCoeff=0.1524;MQ=47.42;MQ0=36;MQRankSum=-4.880;QD=5.82;ReadPosRankSum=-5.291;VQSLOD=-0.5145;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:22:33.87:0,34,739	0/0:7,0:7:12.04:0,12,285	0/0:28,0:11:24.91:0,25,369	0/0:35,0:17:47.27:0,47,777	0/0:27,0:27:60.66:0,61,1382	1/1:23,0:20:2.92:17,3,0	0/0:16,0:12:3.92:0,4,23	0/1:38,0:31:99:344,0,415	1/1:13,0:13:3.01:49,3,0	0/0:14,0:14:33.11:0,33,900	0/0:16,0:16:42.14:0,42,1109	0/0:22,0:19:45.14:0,45,1006	0/0:10,0:8:18.04:0,18,362	0/0:11,0:11:26.96:0,27,702	0/0:15,0:14:36.09:0,36,831	0/1:17,0:15:9.01:83,0,9	0/0:17,0:16:38.48:0,38,726	0/1:10,0:6:11.25:11,0,12	0/1:17,11:26:99:387,0,107	0/1:21,0:19:6.17:45,0,6	1/1:12,0:9:6.02:97,6,0	0/0:17,0:16:39.09:0,39,890	0/0:19,0:19:48.16:0,48,1244	0/0:15,0:15:24.04:0,24,575	0/0:17,0:17:45.12:0,45,1226	0/1:13,0:12:92.62:93,0,106	0/1:11,0:11:25.52:79,0,26	0/1:7,0:6:34.08:74,0,34
chr10	100454698	.	C	CTATGTGG	4162.45	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=10.321;DP=548;FS=5.784;HRun=0;HaplotypeScore=134.6770;InbreedingCoeff=0.8837;MQ=56.61;MQ0=7;MQRankSum=-10.592;QD=48.97;ReadPosRankSum=0.187;VQSLOD=3.3440;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,132,3625	0/0:14,0:14:42.14:0,42,1173	0/0:30,0:21:60.21:0,60,1643	0/0:23,0:15:45.13:0,45,1106	0/0:20,0:20:57.20:0,57,1558	1/1:1,6:6:12.04:416,12,0	1/1:1,3:3:3.01:72,3,0	1/1:3,2:5:12.01:322,12,0	1/1:3,7:8:18.06:555,18,0	0/0:27,0:27:75.21:0,75,1952	0/0:18,0:18:48.16:0,48,1326	0/0:29,0:29:78.20:0,78,2054	0/0:36,0:36:99:0,105,2805	0/0:38,0:38:99:0,114,2902	0/0:35,0:35:99:0,99,2746	1/1:4,7:7:9.03:312,9,0	0/0:30,0:29:84.29:0,84,2346	1/1:0,2:2:6.02:210,6,0	1/1:1,2:2:3.01:110,3,0	1/1:2,19:20:36.12:1244,36,0	0/0:2,1:2:6.02:0,6,96	0/0:37,0:37:99:0,99,2750	0/0:17,0:17:48.12:0,48,1159	0/0:35,0:35:99:0,102,2773	0/0:23,0:23:59.99:0,60,1598	1/1:5,4:8:21.03:611,21,0	1/1:5,8:9:9.03:312,9,0	./.
chr10	100454700	.	A	AGTG	2652.05	PASS	AB=0.720;AC=17;AF=0.304;AN=56;BaseQRankSum=11.850;DP=582;FS=12.430;HRun=0;HaplotypeScore=116.8832;InbreedingCoeff=0.6631;MQ=55.57;MQ0=9;MQRankSum=-11.602;QD=24.56;ReadPosRankSum=0.448;VQSLOD=3.0279;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,2460	0/0:14,0:14:42.14:0,42,783	0/0:31,0:21:63.22:0,63,1143	0/0:24,0:15:45.15:0,45,807	0/0:19,0:19:57.20:0,57,1063	1/1:3,6:8:14.87:275,15,0	0/0:4,3:6:2.90:0,3,16	0/1:4,2:6:37.31:158,0,37	0/1:5,7:10:0.04:307,0,0	0/0:26,0:26:75.21:0,75,1361	0/0:19,0:19:54.17:0,54,971	0/0:30,0:30:78.27:0,78,1440	0/0:35,0:35:99:0,102,1897	0/0:37,0:37:99:0,108,2014	0/0:36,0:36:99:0,105,1895	1/1:11,7:14:21.07:429,21,0	0/0:30,0:30:84.29:0,84,1563	1/1:0,2:2:6.02:106,6,0	1/1:1,2:2:3.01:58,3,0	1/1:9,19:27:54.18:970,54,0	0/0:4,1:4:6.01:0,6,63	0/0:37,0:37:99:0,105,1946	0/0:17,0:17:48.16:0,48,890	0/0:36,0:36:99:0,99,1846	0/0:24,0:24:63.22:0,63,1165	0/1:10,4:13:41.30:299,0,41	1/1:7,8:11:12.01:178,12,0	1/1:1,0:1:3.01:55,3,0
chr10	100454734	.	TTCTTGG	T	4497.90	PASS	AC=22;AF=0.407;AN=54;BaseQRankSum=12.877;DP=572;FS=16.747;HRun=0;HaplotypeScore=130.1773;InbreedingCoeff=0.8776;MQ=52.85;MQ0=14;MQRankSum=-12.667;QD=35.98;ReadPosRankSum=1.084;VQSLOD=3.2764;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,4334	0/0:12,0:12:36.11:0,36,1209	0/0:17,0:9:17.98:0,18,450	0/0:21,0:9:18.06:0,18,540	0/0:31,0:31:84.29:0,84,2887	1/1:1,11:12:12.04:288,12,0	1/1:1,7:8:3.01:72,3,0	./.	1/1:0,9:9:15.05:360,15,0	0/0:26,0:26:78.26:0,78,2601	0/0:20,0:20:60.19:0,60,1959	0/0:27,0:27:81.25:0,81,2688	0/0:33,0:33:99:0,99,3294	0/0:35,0:35:99:0,105,3479	0/0:33,0:33:96.32:0,96,3351	1/1:0,15:15:30.10:720,30,0	0/0:31,0:31:90.31:0,90,3169	1/1:1,2:3:5.97:144,6,0	1/1:4,5:6:5.98:47,6,0	1/1:2,26:27:66.23:1555,66,0	1/1:2,7:8:2.69:52,3,0	0/0:34,0:34:96.27:0,96,3118	0/0:16,0:16:45.15:0,45,1473	0/0:39,0:39:99:0,111,3941	0/0:23,0:23:69.23:0,69,2258	1/1:1,16:17:36.08:756,36,0	1/1:1,13:14:18.06:432,18,0	1/1:0,1:1:3.01:72,3,0
chr10	100455250	.	G	GA	8491.33	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=15.723;DP=728;FS=2.491;HRun=5;HaplotypeScore=138.3769;InbreedingCoeff=0.9896;MQ=74.95;MQ0=3;MQRankSum=-8.758;QD=31.33;ReadPosRankSum=-1.542;VQSLOD=2.5225;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:68.97:0,69,740	0/0:9,0:9:21.05:0,21,226	0/0:41,0:34:69.11:0,69,707	0/0:33,0:32:75.08:0,75,772	0/0:37,0:37:99:0,111,1193	1/1:7,15:21:56.68:654,57,0	1/1:3,23:26:72.23:944,72,0	1/1:7,20:26:60.27:789,60,0	1/1:3,21:24:66.08:837,66,0	0/0:35,0:35:99:0,102,1095	0/0:27,0:27:75.17:0,75,797	0/0:22,0:22:66.17:0,66,708	0/0:20,0:20:51.12:0,51,548	0/0:32,0:32:81.20:0,81,870	0/0:22,0:22:63.16:0,63,677	1/1:5,20:25:66.93:790,67,0	0/0:34,0:34:99:0,99,1064	1/1:1,7:8:24.07:304,24,0	1/1:4,15:19:49.39:616,49,0	1/1:10,31:41:85.32:1042,85,0	1/1:5,5:10:17.13:249,17,0	0/0:24,0:24:69.17:0,69,741	0/0:36,0:36:99:0,102,1096	0/0:32,0:32:86.25:0,86,908	0/0:26,0:26:60.15:0,60,645	1/1:6,24:29:80.94:987,81,0	1/1:5,30:34:94.01:1162,94,0	1/1:1,3:4:9.03:118,9,0
chr10	100455253	.	AAACAAAC	A	10753.14	PASS	AB=0.972;AC=19;AF=0.339;AN=56;BaseQRankSum=9.651;DP=730;FS=6.564;HRun=0;HaplotypeScore=214.3497;InbreedingCoeff=0.5593;MQ=69.29;MQ0=5;MQRankSum=-8.721;QD=39.10;ReadPosRankSum=1.189;VQSLOD=3.7693;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.24:0,75,2601	0/0:11,0:11:30.10:0,30,987	0/0:36,0:29:72.14:0,72,1160	0/0:34,0:30:84.13:0,84,1212	0/0:38,0:38:99:0,114,3547	0/1:22,0:21:70.31:775,0,70	1/1:24,0:24:72.16:1249,72,0	1/1:27,0:24:49.15:926,49,0	0/1:23,1:24:50.83:1111,0,51	0/0:36,0:36:99:0,108,3411	0/0:28,0:28:81.24:0,81,2389	0/0:22,0:22:66.20:0,66,1699	0/0:20,0:20:57.18:0,57,1630	0/0:30,0:30:84.27:0,84,2736	0/0:22,0:22:66.21:0,66,1927	1/1:24,0:24:42.70:1098,43,0	0/0:35,0:35:99:0,102,3209	1/1:8,0:8:24.05:403,24,0	0/1:20,0:20:74.83:719,0,75	0/1:41,1:43:99:1233,0,146	1/1:10,0:11:19.75:279,20,0	0/0:25,0:25:72.23:0,72,2269	0/0:35,0:35:99:0,102,3222	0/0:33,0:33:90.29:0,90,2926	0/0:22,0:22:66.20:0,66,1915	0/1:31,1:32:99:1296,0,162	1/1:34,1:34:2.90:1546,3,0	1/1:4,0:4:9.03:117,9,0
chr10	100455291	.	ACC	A	4169.31	PASS	AB=0.719;AC=13;AF=0.232;AN=56;BaseQRankSum=12.403;DP=712;FS=3.784;HRun=2;HaplotypeScore=180.7666;InbreedingCoeff=-0.0178;MQ=49.10;MQ0=12;MQRankSum=-13.596;QD=16.81;ReadPosRankSum=1.642;VQSLOD=1.4158;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1927	0/0:14,0:14:42.14:0,42,797	0/0:34,0:17:51.17:0,51,877	0/0:42,0:21:60.08:0,60,972	0/0:41,0:41:99:0,123,2321	0/1:12,13:24:34.70:576,0,35	0/1:17,6:23:99:280,0,111	1/1:16,7:16:1.70:166,2,0	0/1:12,11:23:89.74:456,0,90	0/0:38,0:38:99:0,111,2091	0/0:19,0:19:57.20:0,57,1078	0/0:21,0:21:63.22:0,63,1189	0/0:17,0:17:51.17:0,51,936	0/0:32,0:32:96.29:0,96,1739	0/0:18,0:18:54.19:0,54,1002	0/1:15,12:27:77.55:459,0,78	0/0:33,0:33:99:0,99,1879	0/1:4,2:6:26.83:95,0,27	0/1:12,7:20:42.73:331,0,43	0/1:12,20:32:10.10:511,0,10	0/1:8,1:9:18.42:41,0,18	0/0:26,0:26:78.27:0,78,1445	0/0:34,0:34:99:0,102,1893	0/0:40,0:40:99:0,117,2120	0/0:19,0:19:57.20:0,57,1069	1/1:11,13:24:1.53:593,2,0	0/1:18,17:35:92.16:663,0,92	0/0:1,0:1:2.50:0,2,9
chr10	100455307	.	A	AAC	7673.06	PASS	AB=0.679;AC=13;AF=0.232;AN=56;BaseQRankSum=15.706;DP=756;FS=20.142;HRun=0;HaplotypeScore=190.2896;InbreedingCoeff=-0.1192;MQ=51.66;MQ0=11;MQRankSum=-15.932;QD=25.92;ReadPosRankSum=2.797;VQSLOD=4.2023;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1464	0/0:16,0:16:48.16:0,48,733	0/0:37,0:25:50.37:0,50,731	0/0:32,0:15:24.98:0,25,445	0/0:40,0:40:99:0,120,1791	0/1:15,16:30:46.97:919,0,47	0/1:12,15:27:99:706,0,207	0/1:22,7:24:92.95:461,0,93	0/1:12,16:28:42.54:869,0,43	0/0:37,0:37:99:0,102,1503	0/0:21,0:21:60.15:0,60,875	0/0:26,0:26:72.23:0,72,1063	0/0:17,0:17:48.15:0,48,712	0/0:30,0:30:87.30:0,87,1325	0/0:16,0:16:45.15:0,45,669	0/1:9,17:27:34.70:923,0,35	0/0:35,0:35:99:0,102,1530	0/1:3,3:6:34.19:137,0,34	0/1:23,9:30:63.68:559,0,64	0/1:18,14:32:44.96:621,0,45	0/1:5,5:10:24.25:287,0,24	0/0:30,0:30:87.30:0,87,1329	0/0:34,0:34:96.32:0,96,1446	0/0:38,0:38:99:0,108,1579	0/0:18,0:18:54.16:0,54,769	0/1:15,13:28:93.76:737,0,94	0/1:19,22:41:81.52:1297,0,82	1/1:0,3:3:9.03:157,9,0
chr10	100455313	.	A	AAC	6058.47	PASS	AB=0.917;AC=22;AF=0.393;AN=56;BaseQRankSum=20.735;DP=744;FS=23.604;HRun=0;HaplotypeScore=196.2804;InbreedingCoeff=0.7883;MQ=56.23;MQ0=10;MQRankSum=-18.417;QD=20.19;ReadPosRankSum=0.704;VQSLOD=3.0286;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.31:0,96,1448	0/0:15,0:15:45.14:0,45,669	0/0:34,0:28:68.67:0,69,941	0/0:21,0:11:9.47:0,9,330	0/0:38,0:38:99:0,111,1651	1/1:24,10:32:91.30:901,91,0	0/1:24,0:24:31.47:221,0,31	0/1:24,6:25:25.84:308,0,26	1/1:22,8:30:83.07:746,83,0	0/0:38,0:38:99:0,108,1609	0/0:23,0:23:66.20:0,66,961	0/0:25,0:25:69.23:0,69,1033	0/0:15,0:15:45.15:0,45,687	0/0:33,0:33:96.28:0,96,1385	0/0:18,0:18:51.15:0,51,741	1/1:22,7:29:82.25:761,82,0	0/0:37,0:37:99:0,108,1625	1/1:4,2:6:9.38:149,9,0	1/1:29,2:29:78.78:727,79,0	1/1:20,10:30:46.82:431,47,0	1/1:9,2:11:0.33:80,0,0	0/0:30,0:30:90.24:0,90,1309	0/0:30,0:30:90.26:0,90,1350	0/0:38,0:38:99:0,105,1584	0/0:14,0:14:42.14:0,42,642	1/1:25,5:29:76.68:646,77,0	1/1:30,12:42:99:1037,110,0	1/1:3,0:3:8.79:53,9,0
chr10	100455319	.	A	AACAAAC	12241.69	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=19.156;DP=748;FS=14.142;HRun=0;HaplotypeScore=234.0597;InbreedingCoeff=0.9904;MQ=65.23;MQ0=6;MQRankSum=-19.445;QD=40.54;ReadPosRankSum=-0.170;VQSLOD=3.2984;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,2139	0/0:15,0:15:45.14:0,45,1054	0/0:36,0:32:91.94:0,92,1624	0/0:18,0:12:29.74:0,30,483	0/0:36,0:36:99:0,108,2289	1/1:29,3:33:93.02:1515,93,0	1/1:26,0:26:76.95:953,77,0	1/1:27,0:25:45.14:788,45,0	1/1:28,2:32:92.93:1411,93,0	0/0:39,0:39:99:0,114,2534	0/0:20,0:20:60.19:0,60,1368	0/0:24,0:24:69.24:0,69,1620	0/0:20,0:20:54.17:0,54,1140	0/0:33,0:33:96.32:0,96,2217	0/0:21,0:21:60.19:0,60,1288	1/1:30,2:32:89.96:1418,90,0	0/0:39,0:39:99:0,117,2670	1/1:7,0:7:17.98:300,18,0	1/1:29,0:28:81.10:1308,81,0	1/1:20,9:29:48.10:926,48,0	1/1:9,1:11:23.99:373,24,0	0/0:28,0:28:84.27:0,84,1931	0/0:31,0:31:93.23:0,93,1915	0/0:36,0:36:99:0,105,2197	0/0:17,0:17:51.14:0,51,1020	1/1:23,3:26:72.10:1274,72,0	1/1:33,4:42:99:1825,114,0	1/1:3,0:3:9.03:152,9,0
chr10	100455995	.	C	CA	8118.60	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=15.469;DP=520;FS=1.123;HRun=0;HaplotypeScore=78.9903;InbreedingCoeff=0.9908;MQ=83.95;MQ0=0;MQRankSum=-4.454;QD=39.03;ReadPosRankSum=-0.341;VQSLOD=4.9632;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.22:0,96,1252	0/0:7,0:7:21.06:0,21,277	0/0:16,0:16:48:0,48,623	0/0:23,0:22:44.75:0,45,556	0/0:19,0:19:57.17:0,57,778	1/1:0,15:15:39.13:596,39,0	1/1:1,24:25:63.21:935,63,0	1/1:1,18:19:48.13:679,48,0	1/1:0,12:12:30.10:459,30,0	0/0:12,0:12:36.10:0,36,472	0/0:25,0:25:69.20:0,69,939	0/0:16,0:16:48.16:0,48,664	0/0:19,0:19:57.18:0,57,780	0/0:21,0:21:63.21:0,63,879	0/0:28,0:27:78.26:0,78,1088	1/1:1,11:12:27.09:413,27,0	0/0:16,0:16:45.15:0,45,629	1/1:0,15:15:45.15:675,45,0	1/1:1,14:15:39.11:557,39,0	1/1:0,22:23:60.14:890,60,0	1/1:0,25:25:69.23:1054,69,0	0/0:22,0:22:66.21:0,66,890	0/0:17,0:17:51.15:0,51,679	0/0:15,0:15:39.13:0,39,543	0/0:24,0:24:71.81:0,72,940	1/1:3,20:23:24.22:851,24,0	1/1:0,20:20:57.19:872,57,0	1/1:1,3:4:9.03:138,9,0
chr10	100456380	.	TC	T	9616.78	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=18.059;DP=602;FS=11.185;HRun=2;HaplotypeScore=77.0473;InbreedingCoeff=0.9988;MQ=91.23;MQ0=0;MQRankSum=-2.924;QD=39.09;ReadPosRankSum=2.297;VQSLOD=4.7357;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,2060	0/0:7,0:7:21.07:0,21,336	0/0:33,0:33:99:0,99,1573	0/0:16,0:16:48.16:0,48,735	0/0:20,0:20:60.19:0,60,936	1/1:0,27:27:72.24:1007,72,0	1/1:0,27:27:81.27:1133,81,0	1/1:0,28:28:81.27:1130,81,0	1/1:0,18:18:45.15:629,45,0	0/0:16,0:16:48.16:0,48,766	0/0:19,0:19:57.19:0,57,907	0/0:13,0:13:39.13:0,39,624	0/0:30,0:30:90.31:0,90,1439	0/0:18,0:18:54.18:0,54,863	0/0:32,0:32:96.33:0,96,1535	1/1:0,29:29:81.27:1133,81,0	0/0:31,0:31:90.29:0,90,1406	1/1:0,18:18:48.16:671,48,0	1/1:0,21:21:63.20:863,63,0	1/1:0,12:12:36.12:503,36,0	1/1:0,8:8:21.07:294,21,0	0/0:28,0:28:84.26:0,84,1287	0/0:15,0:15:45.14:0,45,691	0/0:17,0:17:51.17:0,51,815	0/0:17,0:17:48.16:0,48,768	1/1:0,22:22:66.17:869,66,0	1/1:0,20:20:51.17:713,51,0	1/1:0,16:16:48.16:671,48,0
chr10	100457269	.	CTACATTGATGGTT	C	937.48	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.898;DP=569;FS=2.907;HRun=0;HaplotypeScore=210.5727;InbreedingCoeff=0.9296;MQ=82.76;MQ0=0;MQRankSum=-5.101;QD=72.11;ReadPosRankSum=0.891;VQSLOD=3.0640;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:27.09:1031,27,0	0/0:4,0:4:9.03:0,9,591	0/0:21,0:21:63.22:0,63,3488	0/0:12,0:12:36.12:0,36,1826	0/0:37,0:37:99:0,108,6450	0/0:16,0:16:45.15:0,45,2595	0/0:19,0:19:54.19:0,54,3425	0/0:26,0:26:66.23:0,66,3507	0/0:13,0:13:39.12:0,39,2284	0/0:26,0:26:72.25:0,72,4231	0/0:37,0:37:99:0,105,6359	0/0:29,0:29:84.27:0,84,5167	0/0:26,0:26:72.25:0,72,4334	0/0:14,0:14:42.14:0,42,2675	0/0:25,0:25:69.24:0,69,4002	0/0:23,0:23:69.24:0,69,4130	0/0:13,0:13:39.11:0,39,2289	0/0:10,0:10:30.10:0,30,1967	0/0:21,0:21:54.16:0,54,2837	0/0:27,0:27:78.27:0,78,4796	0/0:27,0:27:81.28:0,81,4880	0/0:22,0:22:66.23:0,66,3946	0/0:24,0:24:69.24:0,69,4376	0/0:16,0:16:48.16:0,48,3109	0/0:18,0:18:45.15:0,45,2895	0/0:24,0:24:69.24:0,69,3891	0/0:21,0:21:60.21:0,60,3578	0/0:5,0:5:15.05:0,15,838
chr10	100457645	.	AT	A	333.57	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.886;DP=493;FS=0.000;HRun=7;HaplotypeScore=48.5480;InbreedingCoeff=0.8709;MQ=75.29;MQ0=1;MQRankSum=-1.326;QD=22.24;ReadPosRankSum=0.747;VQSLOD=3.0365;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:42.10:428,42,0	0/0:7,0:7:21.06:0,21,257	0/0:14,0:14:32.64:0,33,336	0/0:7,0:6:6.02:0,6,70	0/0:28,1:29:44.63:0,45,875	0/0:27,0:27:81.25:0,81,1007	0/0:10,0:10:24.08:0,24,301	0/0:33,0:33:87.28:0,87,1094	0/0:18,0:18:45.14:0,45,566	0/0:33,0:33:90.28:0,90,1121	0/0:22,0:22:48.15:0,48,597	0/0:14,0:14:36.12:0,36,453	0/0:15,0:15:45.13:0,45,550	0/0:12,0:12:36.12:0,36,453	0/0:15,0:15:42.11:0,42,504	0/0:16,0:16:48.14:0,48,591	0/0:16,0:16:42.13:0,42,528	0/0:22,0:22:54.11:0,54,647	0/0:28,0:28:75.23:0,75,932	0/0:16,0:16:45.14:0,45,565	0/0:6,0:6:15.05:0,15,188	0/0:14,0:14:36.11:0,36,441	0/0:21,0:21:63.20:0,63,793	0/0:5,0:5:14.94:0,15,150	0/0:18,0:18:54.17:0,54,679	0/0:32,0:32:90.29:0,90,1128	0/0:21,0:21:57.16:0,57,690	0/0:7,0:7:21.07:0,21,264
chr10	100458469	.	A	AG	97.62	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.757;DP=578;FS=1.185;HRun=6;HaplotypeScore=69.8135;InbreedingCoeff=0.9283;MQ=75.22;MQ0=1;MQRankSum=-1.134;QD=8.13;ReadPosRankSum=-2.143;VQSLOD=0.0209;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,8:12:11.16:183,11,0	0/0:4,0:4:12.03:0,12,122	0/0:40,0:29:50.34:0,50,487	0/0:39,0:31:45.11:0,45,559	0/0:23,0:23:57.10:0,57,572	0/0:26,0:26:75.13:0,75,746	0/0:24,0:24:66.13:0,66,664	0/0:31,0:32:40.20:0,40,588	0/0:21,0:21:54.10:0,54,543	0/0:18,0:18:36.06:0,36,362	0/0:18,0:18:45.09:0,45,454	0/0:17,0:17:39.07:0,39,391	0/0:15,0:15:39.04:0,39,387	0/0:15,0:15:36.08:0,36,367	0/0:31,0:31:81.12:0,81,798	0/0:24,0:24:66.15:0,66,673	0/0:21,0:21:54.12:0,54,549	0/0:13,0:13:36.07:0,36,361	0/0:16,0:16:33.02:0,33,322	0/0:15,0:15:35.87:0,36,349	0/0:20,0:20:51.05:0,51,503	0/0:8,0:8:24.05:0,24,243	0/0:16,0:16:42.09:0,42,426	0/0:20,0:20:51.11:0,51,518	0/0:21,0:21:51.10:0,51,515	0/0:24,0:24:57.10:0,57,572	0/0:27,0:26:63.13:0,63,642	0/0:17,0:17:27.15:0,27,410
chr10	100459395	.	GA	G	472.75	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.342;DP=575;FS=3.636;HRun=1;HaplotypeScore=55.2914;InbreedingCoeff=0.9976;MQ=75.17;MQ0=0;MQRankSum=-4.559;QD=31.52;ReadPosRankSum=1.766;VQSLOD=3.3685;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:42.14:568,42,0	0/0:14,0:14:42.14:0,42,672	0/0:11,0:11:33.07:0,33,445	0/0:11,0:11:33.05:0,33,435	0/0:36,0:36:99:0,108,1693	0/0:25,0:25:75.24:0,75,1169	0/0:11,0:11:33.11:0,33,528	0/0:30,0:30:87.28:0,87,1350	0/0:27,0:27:81.26:0,81,1262	0/0:29,0:29:84.28:0,84,1313	0/0:31,0:31:93.32:0,93,1483	0/0:19,0:19:57.19:0,57,904	0/0:33,0:33:99:0,99,1573	0/0:19,0:19:57.16:0,57,864	0/0:18,0:18:54.18:0,54,856	0/0:19,0:19:57.19:0,57,909	0/0:22,0:22:66.22:0,66,1048	0/0:9,0:9:27.09:0,27,418	0/0:19,0:19:57.19:0,57,909	0/0:36,0:36:99:0,108,1681	0/0:10,0:10:30.10:0,30,473	0/0:15,0:15:45.15:0,45,720	0/0:19,0:19:57.18:0,57,883	0/0:16,0:16:48.16:0,48,764	0/0:21,0:21:63.21:0,63,1005	0/0:23,0:23:69.24:0,69,1096	0/0:23,0:23:69.22:0,69,1080	0/0:14,0:14:42.14:0,42,671
chr10	100459463	.	GTAGTCAAA	G	828.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.789;DP=629;FS=3.784;HRun=0;HaplotypeScore=155.4242;InbreedingCoeff=0.9951;MQ=84.96;MQ0=0;MQRankSum=-5.521;QD=30.70;ReadPosRankSum=0.343;VQSLOD=3.3620;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:38.72:924,39,0	0/0:11,0:11:33.11:0,33,1364	0/0:27,0:27:81.28:0,81,3057	0/0:23,0:23:60.16:0,60,2127	0/0:32,0:32:93.29:0,93,3872	0/0:29,0:29:87.28:0,87,3760	0/0:16,0:16:48.15:0,48,2024	0/0:36,0:36:99:0,108,4372	0/0:28,0:28:81.25:0,81,3391	0/0:24,0:24:69.24:0,69,3014	0/0:21,0:21:54.16:0,54,2043	0/0:18,0:18:54.19:0,54,2403	0/0:32,0:32:96.30:0,96,3959	0/0:19,0:19:57.16:0,57,2314	0/0:17,0:17:51.18:0,51,2261	0/0:21,0:21:63.22:0,63,2817	0/0:7,0:7:21.07:0,21,790	0/0:14,0:14:42.14:0,42,1876	0/0:21,0:21:63.21:0,63,2549	0/0:29,0:29:84.27:0,84,3596	0/0:21,0:21:60.19:0,60,2488	0/0:21,0:21:63.22:0,63,2715	0/0:36,0:36:99:0,105,4604	0/0:10,0:10:30.08:0,30,1200	0/0:23,0:23:66.21:0,66,2797	0/0:20,0:20:57.20:0,57,2341	0/0:28,0:28:78.23:0,78,3234	0/0:18,0:18:54.17:0,54,2304
chr10	100460013	.	C	CATA	476.42	PASS	AB=0.667;AC=1;AF=0.019;AN=54;BaseQRankSum=5.001;DP=452;FS=12.840;HRun=0;HaplotypeScore=80.5929;InbreedingCoeff=-0.0193;MQ=81.85;MQ0=7;MQRankSum=-4.887;QD=26.47;ReadPosRankSum=-2.601;VQSLOD=2.2725;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,9:17:61.13:551,0,61	0/0:12,0:12:30.02:0,30,477	0/0:24,0:20:43.23:0,43,851	0/0:34,0:20:45.42:0,45,683	0/0:16,0:16:42:0,42,685	0/0:21,0:21:57.11:0,57,908	0/0:18,0:18:48.16:0,48,785	0/0:23,0:23:60.16:0,60,977	0/0:21,0:21:60.16:0,60,952	0/0:14,0:13:39.12:0,39,603	0/0:11,0:11:30.10:0,30,511	0/0:13,0:13:39.05:0,39,597	0/0:10,0:10:30.10:0,30,501	0/0:16,0:15:42.06:0,42,651	0/0:13,0:13:36.12:0,36,613	0/0:20,0:20:48.06:0,48,745	0/0:10,0:9:24.08:0,24,349	./.	0/0:14,0:13:36.11:0,36,586	0/0:19,0:19:54.17:0,54,893	0/0:31,0:31:81.19:0,81,1317	0/0:9,0:9:27.09:0,27,457	0/0:22,0:22:63.18:0,63,1001	0/0:17,0:17:45.07:0,45,704	0/0:10,0:10:22.32:0,22,361	0/0:13,0:13:27.03:0,27,402	0/0:14,0:12:27.09:0,27,446	0/0:9,0:9:27.09:0,27,449
chr10	100460127	.	TTCTC	T	705.35	PASS	AB=0.986;AC=20;AF=0.417;AN=48;BaseQRankSum=0.758;DP=482;FS=1.987;HRun=0;HaplotypeScore=94.3609;InbreedingCoeff=0.3626;MQ=55.82;MQ0=12;MQRankSum=0.107;QD=3.62;ReadPosRankSum=0.219;VQSLOD=2.0209;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:2,0:1:0:0,0,0	1/1:6,0:6:1.83:4,2,0	./.	0/0:42,0:10:0:0,0,0	0/1:19,0:18:20.27:20,0,220	0/1:23,0:23:47.92:48,0,58	0/0:17,0:16:0.78:0,1,50	0/0:20,0:19:0:0,0,0	1/1:11,0:10:0.47:1,0,0	0/0:20,0:19:6.01:0,6,61	0/0:16,0:16:9.03:0,9,179	1/1:12,0:15:2.98:28,3,0	0/0:12,0:12:8.50:0,8,104	1/1:15,1:14:3.01:46,3,0	1/1:16,6:22:13.11:313,13,0	0/0:14,0:15:18.03:0,18,247	1/1:15,8:22:21.02:276,21,0	./.	./.	0/0:16,0:16:9.50:0,10,186	0/1:16,1:17:16.53:40,0,17	0/0:20,0:20:2.72:0,3,16	1/1:14,1:14:3.01:46,3,0	1/1:18,0:26:2.88:22,3,0	0/0:20,0:20:12.03:0,12,192	0/0:19,0:19:13.69:0,14,174	0/0:16,0:16:21.05:0,21,272	./.
chr10	100460345	.	ATT	A	167.92	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.996;DP=517;FS=3.260;HRun=2;HaplotypeScore=65.7090;InbreedingCoeff=0.9848;MQ=71.51;MQ0=2;MQRankSum=-3.889;QD=16.79;ReadPosRankSum=1.461;VQSLOD=1.3168;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,7:10:21.07:260,21,0	0/0:9,0:9:27.09:0,27,510	0/0:23,0:15:36.22:0,36,553	0/0:17,0:11:26.87:0,27,368	0/0:26,0:26:78.27:0,78,1539	0/0:28,0:28:84.29:0,84,1691	0/0:16,0:16:48.15:0,48,928	0/0:21,0:21:61.09:0,61,1183	0/0:19,0:18:54.14:0,54,1004	0/0:22,0:22:66.23:0,66,1303	0/0:21,0:20:63.22:0,63,1259	0/0:19,0:19:54.19:0,54,1090	0/0:15,0:15:45.15:0,45,880	0/0:20,0:20:60.21:0,60,1195	0/0:23,0:23:69.24:0,69,1375	0/0:22,0:22:66.18:0,66,1253	0/0:27,0:27:78.27:0,78,1560	0/0:7,0:7:18.06:0,18,365	0/0:19,0:19:57.19:0,57,1106	0/0:22,0:22:66.22:0,66,1259	0/0:18,0:18:54.17:0,54,1036	0/0:13,0:13:39.13:0,39,711	0/0:19,0:19:57.15:0,57,1068	0/0:17,0:17:51.17:0,51,1011	0/0:17,0:17:51.18:0,51,1026	0/0:21,0:21:63.22:0,63,1272	0/0:16,0:16:48.16:0,48,924	0/0:10,0:10:27.07:0,27,491
chr10	100460432	.	AT	A	517.41	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.580;DP=533;FS=0.000;HRun=6;HaplotypeScore=53.0848;InbreedingCoeff=0.9696;MQ=74.81;MQ0=0;MQRankSum=-3.120;QD=21.56;ReadPosRankSum=1.471;VQSLOD=2.7126;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:57.14:612,57,0	0/0:7,0:7:18.06:0,18,237	0/0:19,0:19:48.13:0,48,587	0/0:7,0:7:14.92:0,15,197	0/0:38,0:37:99:0,108,1414	0/0:19,0:19:48.13:0,48,615	0/0:9,0:9:27.07:0,27,341	0/0:22,0:22:63.19:0,63,801	0/0:29,0:29:81.23:0,81,1020	0/0:25,0:25:66.21:0,66,854	0/0:32,0:32:90.28:0,90,1169	0/0:15,0:15:45.15:0,45,588	0/0:16,0:16:42.14:0,42,553	0/0:15,0:15:42.14:0,42,553	0/0:17,0:17:51.16:0,51,666	0/0:21,0:21:57.19:0,57,750	0/0:24,0:24:63.19:0,63,815	0/0:8,0:8:21.07:0,21,276	0/0:18,0:18:51.15:0,51,645	0/0:19,0:19:51.17:0,51,670	0/0:21,0:21:60.19:0,60,787	0/0:19,0:19:54.16:0,54,696	0/0:22,0:22:66.20:0,66,854	0/0:15,0:15:45.15:0,45,587	0/0:20,0:20:57.19:0,57,750	0/0:21,0:21:60.19:0,60,777	0/0:23,0:23:66.21:0,66,868	0/0:8,0:8:24.08:0,24,316
chr10	100460589	.	TTTTCAGTGCAGGG	T	1325.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.093;DP=676;FS=1.032;HRun=0;HaplotypeScore=240.2085;InbreedingCoeff=0.9901;MQ=68.83;MQ0=0;MQRankSum=-6.152;QD=53.00;ReadPosRankSum=-0.137;VQSLOD=2.9450;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,18:23:39.09:1420,39,0	0/0:11,0:11:30.10:0,30,1870	0/0:17,0:17:41.70:0,42,1847	0/0:17,0:17:25.97:0,26,1653	0/0:24,0:24:72.23:0,72,3958	0/0:21,0:21:57.20:0,57,3660	0/0:24,0:24:69.22:0,69,3588	0/0:39,0:39:99:0,113,6248	0/0:34,0:34:99:0,99,5258	0/0:32,0:32:87.30:0,87,5417	0/0:25,0:25:66.23:0,66,4048	0/0:17,0:17:51.18:0,51,3146	0/0:24,0:24:72.25:0,72,4196	0/0:26,0:26:78.27:0,78,5034	0/0:22,0:22:63.20:0,63,3871	0/0:26,0:26:78.26:0,78,4370	0/0:36,0:36:99:0,102,6359	0/0:12,0:12:36.12:0,36,2068	0/0:25,0:25:63.21:0,63,3694	0/0:23,0:23:66.23:0,66,4240	0/0:23,0:23:69.24:0,69,3985	0/0:25,0:25:72.25:0,72,4368	0/0:31,0:31:81.28:0,81,4953	0/0:25,0:25:69.24:0,69,4465	0/0:28,0:28:81.28:0,81,5078	0/0:24,0:24:72.25:0,72,4482	0/0:33,0:33:99:0,99,6316	0/0:6,0:6:18.06:0,18,1165
chr10	100462607	.	AG	A	1558.13	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.661;DP=849;FS=0.560;HRun=3;HaplotypeScore=79.0539;InbreedingCoeff=0.9957;MQ=59.69;MQ0=14;MQRankSum=0.304;QD=31.16;ReadPosRankSum=3.735;VQSLOD=3.8114;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,49:50:99:1653,135,0	0/0:13,0:13:36.12:0,36,518	0/0:16,0:13:39.13:0,39,560	0/0:21,0:17:45.11:0,45,614	0/0:38,0:35:99:0,102,1450	0/0:38,0:36:99:0,108,1476	0/0:33,0:30:75.25:0,75,1080	0/0:36,0:35:99:0,105,1466	0/0:28,0:28:81.23:0,81,1113	0/0:21,0:21:63.21:0,63,907	0/0:14,0:14:42.14:0,42,604	0/0:34,0:34:93.28:0,93,1302	0/0:42,0:42:99:0,126,1788	0/0:26,0:26:75.25:0,75,1071	0/0:55,0:55:99:0,166,2354	0/0:31,0:30:84.24:0,84,1154	0/0:40,0:40:88.43:0,88,1470	0/0:36,0:34:90.25:0,90,1253	0/0:25,0:22:63.18:0,63,854	0/0:32,0:31:87.29:0,87,1250	0/0:53,0:53:99:0,150,2133	0/0:18,0:18:48.16:0,48,691	0/0:18,0:17:51.15:0,51,713	0/0:30,0:30:81.26:0,81,1144	0/0:27,0:27:81.24:0,81,1129	0/0:34,0:34:99:0,102,1451	0/0:33,0:33:96.31:0,96,1358	0/0:7,0:7:21.07:0,21,302
chr10	100463814	.	TA	T	696.13	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.611;DP=669;FS=1.724;HRun=4;HaplotypeScore=62.0651;InbreedingCoeff=0.9995;MQ=84.81;MQ0=0;MQRankSum=-3.217;QD=31.64;ReadPosRankSum=1.380;VQSLOD=4.2718;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:66.20:791,66,0	0/0:15,0:15:45.15:0,45,629	0/0:26,0:26:68.30:0,68,893	0/0:15,0:15:43.91:0,44,548	0/0:42,0:42:99:0,126,1714	0/0:26,0:26:78.24:0,78,1059	0/0:13,0:13:36.12:0,36,504	0/0:32,0:32:90.30:0,90,1246	0/0:23,0:23:63.19:0,63,860	0/0:27,0:27:75.21:0,75,1013	0/0:27,0:27:78.24:0,78,1059	0/0:19,0:19:54.16:0,54,721	0/0:23,0:23:69.20:0,69,916	0/0:23,0:23:69.23:0,69,966	0/0:33,0:33:93.29:0,93,1268	0/0:16,0:16:45.12:0,45,596	0/0:16,0:16:48.14:0,48,654	0/0:18,0:18:54.16:0,54,733	0/0:13,0:13:36.11:0,36,489	0/0:31,0:31:90.23:0,90,1160	0/0:12,0:12:36.12:0,36,503	0/0:26,0:26:78.25:0,78,1074	0/0:29,0:29:84.23:0,84,1108	0/0:18,0:18:54.18:0,54,755	0/0:34,0:33:99:0,102,1394	0/0:31,0:31:93.30:0,93,1288	0/0:43,0:43:99:0,126,1692	0/0:16,0:16:48.15:0,48,654
chr10	100464839	.	A	ATATC	5177.80	PASS	AB=0.744;AC=38;AF=0.760;AN=50;BaseQRankSum=-4.310;DP=586;FS=1.871;HRun=0;HaplotypeScore=122.7682;InbreedingCoeff=0.2812;MQ=68.29;MQ0=4;MQRankSum=-0.406;QD=11.61;ReadPosRankSum=-1.514;VQSLOD=4.1827;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:1.96:0,2,7	1/1:12,0:12:9.03:188,9,0	./.	./.	1/1:18,16:34:33.11:763,33,0	1/1:14,9:24:11.96:277,12,0	0/0:12,0:12:2.89:0,3,25	./.	1/1:12,6:18:6.02:128,6,0	0/0:23,0:25:30.09:0,30,418	0/0:22,0:22:27.09:0,27,408	1/1:11,7:18:15.05:347,15,0	1/1:13,10:24:15.05:335,15,0	1/1:12,1:20:2.92:69,3,0	0/1:18,13:31:21.21:461,0,21	1/1:14,1:21:2.91:70,3,0	1/1:13,0:20:8.96:127,9,0	1/1:12,0:14:6:76,6,0	1/1:17,0:22:15.03:209,15,0	1/1:27,0:27:2.98:8,3,0	0/1:12,1:13:36.24:125,0,36	1/1:12,1:23:3.01:52,3,0	1/1:12,3:14:3.01:70,3,0	1/1:13,0:13:5.99:49,6,0	0/1:15,17:33:6.10:793,0,6	1/1:12,7:19:21.06:436,21,0	1/1:19,0:28:12.04:207,12,0	0/1:9,7:16:24.23:389,0,24
chr10	100466700	.	CA	C	3596.40	PASS	AB=0.909;AC=13;AF=0.232;AN=56;BaseQRankSum=13.378;DP=597;FS=5.894;HRun=8;HaplotypeScore=70.9416;InbreedingCoeff=0.9219;MQ=69.92;MQ0=0;MQRankSum=-2.403;QD=22.48;ReadPosRankSum=2.249;VQSLOD=4.3865;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:72.11:695,72,0	0/1:9,1:10:4.92:5,0,219	0/0:7,0:7:21.04:0,21,234	0/0:10,0:9:23.99:0,24,262	0/0:32,0:32:87.23:0,87,1024	0/0:27,0:27:72.18:0,72,844	0/0:11,0:11:33.10:0,33,399	0/0:19,0:19:45.12:0,45,524	0/0:13,0:13:36.11:0,36,435	0/0:25,0:25:66.20:0,66,789	0/0:27,0:27:60.12:0,60,688	1/1:1,21:22:63.10:608,63,0	0/0:27,0:27:78.24:0,78,942	1/1:2,22:24:60.09:579,60,0	0/0:24,0:24:66.20:0,66,788	0/0:20,0:20:57.17:0,57,689	0/0:25,0:25:72.21:0,72,859	0/0:13,0:13:33.07:0,33,383	0/0:29,0:29:66.19:0,66,787	0/0:23,0:25:72.07:0,72,837	0/0:19,0:19:45.13:0,45,534	1/1:3,18:21:51.06:486,51,0	1/1:7,24:31:67.67:643,68,0	1/1:3,24:27:60.09:579,60,0	0/0:25,0:25:69.18:0,69,810	0/0:28,0:28:75.23:0,75,906	0/0:19,0:19:48.09:0,48,561	0/0:12,0:12:30.09:0,30,362
chr10	100467429	.	AGCACTGG	A	16309.16	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=14.124;DP=725;FS=2.984;HRun=0;HaplotypeScore=212.1902;InbreedingCoeff=0.9806;MQ=85.08;MQ0=0;MQRankSum=-18.647;QD=60.63;ReadPosRankSum=-0.012;VQSLOD=4.3592;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,4275	0/0:10,0:10:27.09:0,27,1091	0/0:29,0:29:78.27:0,78,2893	0/0:27,0:27:60.26:0,60,2350	0/0:42,0:42:99:0,123,4773	1/1:1,33:34:84.29:2213,84,0	1/1:0,22:22:48.01:1141,48,0	1/1:1,21:22:63.15:1404,63,0	1/1:2,32:34:81.28:2132,81,0	0/0:24,0:24:72.25:0,72,2909	0/0:21,0:21:60.21:0,60,2321	0/0:39,0:39:99:0,117,4578	0/0:28,0:28:84.29:0,84,3192	0/0:34,0:34:99:0,102,4035	0/0:32,0:32:90.29:0,90,3392	1/1:2,32:34:75.26:1976,75,0	0/0:27,0:27:78.27:0,78,3148	1/1:0,4:4:12.04:316,12,0	1/1:0,24:24:72.20:1650,72,0	1/1:3,21:24:51.17:1301,51,0	1/1:1,13:14:24.01:528,24,0	0/0:23,0:23:66.23:0,66,2589	0/0:24,0:24:72.25:0,72,2839	0/0:28,0:28:84.29:0,84,3182	0/0:28,0:28:84.26:0,84,3183	1/1:0,23:23:69.24:1753,69,0	1/1:1,30:31:66.23:1737,66,0	1/1:0,3:3:6.02:158,6,0
chr10	100468586	.	TA	T	11755.08	PASS	AB=0.540;AC=35;AF=0.625;AN=56;BaseQRankSum=16.397;DP=634;FS=0.000;HRun=7;HaplotypeScore=132.6567;InbreedingCoeff=0.9595;MQ=83.59;MQ0=0;MQRankSum=-3.519;QD=27.15;ReadPosRankSum=2.953;VQSLOD=3.1986;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,32:36:90.20:918,90,0	0/0:11,0:11:30.10:0,30,377	0/0:21,0:21:53.91:0,54,605	0/0:15,0:15:38.73:0,39,449	0/0:25,0:25:72.23:0,72,905	1/1:3,30:33:87.20:887,87,0	1/1:2,17:19:48.11:489,48,0	1/1:2,22:24:66.13:667,66,0	1/1:0,20:20:57.13:581,57,0	0/0:20,0:20:45.14:0,45,563	0/0:17,0:17:51.16:0,51,642	1/1:0,26:26:72.16:735,72,0	0/0:22,0:22:66.20:0,66,819	1/1:1,20:21:60.13:612,60,0	0/0:21,0:21:60.17:0,60,728	1/1:4,24:28:72.16:734,72,0	0/0:27,0:26:75.23:0,75,932	1/1:1,17:18:48.11:489,48,0	1/1:4,26:30:78.15:783,78,0	1/1:2,31:33:93.21:949,93,0	1/1:1,23:24:63.14:643,63,0	1/1:0,31:31:90.20:918,90,0	1/1:2,23:25:69.16:704,69,0	1/1:1,15:16:45.10:459,45,0	0/0:22,0:22:60.19:0,60,754	0/1:4,23:27:0.30:609,0,0	1/1:1,14:15:34.34:364,34,0	1/1:0,7:7:21.05:214,21,0
chr10	100468838	.	CCTCT	C	17375.96	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=15.559;DP=693;FS=7.546;HRun=0;HaplotypeScore=124.3640;InbreedingCoeff=0.9884;MQ=72.53;MQ0=1;MQRankSum=-1.411;QD=37.94;ReadPosRankSum=4.499;VQSLOD=4.9789;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,54:59:99:2172,123,0	0/0:4,0:4:9.03:0,9,225	0/0:15,0:16:29.89:0,30,638	0/0:17,0:17:22.94:0,23,704	0/0:30,0:31:78.04:0,78,1868	1/1:0,13:13:36.12:636,36,0	1/1:2,18:20:45.15:794,45,0	1/1:6,30:36:84.27:1447,84,0	1/1:4,22:26:54.18:953,54,0	0/0:26,0:26:72.25:0,72,1804	0/0:16,0:16:39.13:0,39,980	1/1:3,26:29:72.25:1271,72,0	0/0:26,0:26:72.25:0,72,1846	1/1:5,19:24:48.12:813,48,0	0/0:41,0:41:99:0,111,2721	1/1:2,15:17:33.11:583,33,0	0/0:34,0:35:93.11:0,93,2274	1/1:1,21:22:54.19:953,54,0	1/1:4,15:19:42.12:710,42,0	1/1:5,19:24:54.18:953,54,0	1/1:7,21:28:44.73:794,45,0	1/1:2,17:19:42.14:741,42,0	1/1:5,15:20:35.79:635,36,0	1/1:3,31:34:72.72:1273,73,0	0/0:22,0:23:63:0,63,1484	1/1:4,25:28:72.25:1270,72,0	1/1:5,26:31:63.22:1112,63,0	1/1:2,6:7:15.05:265,15,0
chr10	100469031	.	A	AC	19938.34	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-10.622;DP=709;FS=5.028;HRun=0;HaplotypeScore=69.2446;InbreedingCoeff=1.0000;MQ=78.17;MQ0=0;MQRankSum=-4.005;QD=40.20;ReadPosRankSum=1.154;VQSLOD=5.4845;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:81.11:1226,81,0	0/0:15,0:15:45.15:0,45,628	0/0:17,0:17:45.13:0,45,595	0/0:20,0:20:57.02:0,57,678	0/0:27,0:27:81.27:0,81,1131	1/1:2,32:34:82.87:1191,83,0	1/1:1,16:17:42.14:654,42,0	1/1:0,34:34:99:1517,102,0	1/1:2,24:26:60.20:915,60,0	0/0:30,0:30:90.29:0,90,1220	0/0:17,0:17:48.16:0,48,670	1/1:0,30:30:84.28:1292,84,0	0/0:25,0:25:75.25:0,75,1046	1/1:1,39:40:99:1653,112,0	0/0:25,0:25:72.23:0,72,991	1/1:2,41:43:99:1718,111,0	0/0:18,0:18:54.17:0,54,737	1/1:0,28:28:81.28:1257,81,0	1/1:2,19:22:41.87:885,42,0	1/1:0,23:23:60.20:936,60,0	1/1:0,17:17:47.99:687,48,0	1/1:1,23:24:57.11:846,57,0	1/1:1,23:24:51.54:750,52,0	1/1:0,18:18:48.16:735,48,0	0/0:19,0:19:57.19:0,57,793	1/1:2,28:30:42.18:1173,42,0	1/1:0,42:42:99:1896,123,0	1/1:0,13:13:39.13:607,39,0
chr10	100469504	.	G	GAAT	2537.33	PASS	AC=22;AF=0.524;AN=42;BaseQRankSum=-1.575;DP=218;FS=6.965;HRun=0;HaplotypeScore=37.3936;InbreedingCoeff=0.7269;MQ=65.70;MQ0=0;MQRankSum=0.900;QD=20.63;ReadPosRankSum=-0.875;VQSLOD=2.0172;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:7:3.45:0,3,22	./.	./.	./.	0/0:8,0:8:18.06:0,18,242	1/1:5,9:14:25.33:470,25,0	./.	1/1:21,4:25:9.03:154,9,0	1/1:3,3:6:9.03:175,9,0	0/0:6,0:6:9.03:0,9,120	0/0:6,0:6:6.02:0,6,81	./.	0/0:6,0:6:6.02:0,6,80	0/0:4,0:7:6.41:0,6,41	0/0:13,0:13:24.07:0,24,310	1/1:2,1:3:3.01:58,3,0	0/0:14,0:14:21.07:0,21,283	1/1:4,13:18:36.12:700,36,0	1/1:8,2:10:1.90:111,2,0	1/1:6,1:7:3.01:58,3,0	1/1:1,3:5:9.03:175,9,0	0/0:4,0:7:8.93:0,9,63	./.	./.	0/0:6,0:7:12.01:0,12,142	1/1:3,4:7:12.04:216,12,0	1/1:5,3:8:6.02:117,6,0	1/1:8,10:18:24.08:467,24,0
chr10	100470711	.	CCAAATAT	C	4331.82	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.031;DP=653;FS=1.645;HRun=0;HaplotypeScore=146.1473;InbreedingCoeff=0.9951;MQ=82.32;MQ0=0;MQRankSum=-12.192;QD=38.68;ReadPosRankSum=0.609;VQSLOD=4.9032;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,13:22:36.08:765,36,0	0/0:11,0:11:30.10:0,30,1065	0/0:20,0:20:30.09:0,30,850	0/0:21,0:21:30.09:0,30,853	0/0:41,0:41:99:0,102,3622	0/0:31,0:30:84.26:0,84,2902	0/0:14,0:14:30.10:0,30,1045	0/0:41,0:41:69.22:0,69,2216	0/0:20,0:20:36.11:0,36,1165	0/0:32,0:32:87.29:0,87,3119	0/0:27,0:27:63.22:0,63,2247	1/1:4,14:18:36.12:850,36,0	0/0:26,0:26:63.20:0,63,2255	1/1:3,13:16:27.09:638,27,0	0/0:30,0:30:78.27:0,78,2789	0/0:39,0:39:93.32:0,93,3339	0/0:24,0:24:57.16:0,57,1792	0/0:23,0:23:42.14:0,42,1473	0/0:13,0:13:18.05:0,18,518	0/0:24,0:24:63.20:0,63,2201	0/0:17,0:17:42.14:0,42,1568	1/1:6,15:21:33.11:779,33,0	1/1:5,17:22:39.09:873,39,0	1/1:4,9:13:18.06:427,18,0	0/0:23,0:23:54.19:0,54,1936	0/0:26,0:26:57.19:0,57,2035	0/0:26,0:26:63.22:0,63,2305	0/0:12,0:12:21.07:0,21,777
chr10	100470908	.	T	TGGCATTTCGTCTA	53635.52	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-4.245;DP=632;FS=1.857;HRun=0;HaplotypeScore=201.8090;InbreedingCoeff=0.9829;MQ=66.60;MQ0=0;MQRankSum=-18.010;QD=127.70;ReadPosRankSum=-1.081;VQSLOD=4.9436;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,12:33:60.21:3603,60,0	0/0:12,0:12:36.12:0,36,1368	0/0:16,0:16:38.98:0,39,1011	0/0:19,0:19:48.16:0,48,1588	0/0:23,0:23:66.21:0,66,2515	1/1:8,9:18:51.17:2819,51,0	1/1:12,8:24:57.19:2879,57,0	1/1:22,3:34:93.28:3913,93,0	1/1:9,11:23:51.17:2869,51,0	0/0:27,0:27:75.26:0,75,2816	0/0:15,0:15:39.13:0,39,1422	1/1:5,12:18:50.90:3032,51,0	0/0:24,0:24:66.23:0,66,2434	1/1:16,17:36:93.32:5514,93,0	0/0:28,0:28:75.26:0,75,2824	1/1:8,12:23:54.19:3228,54,0	0/0:20,0:20:60.21:0,60,2229	1/1:9,3:13:23.02:1437,23,0	1/1:10,7:20:51.11:2321,51,0	1/1:15,15:32:93.27:4257,93,0	1/1:7,3:19:18.06:1041,18,0	1/1:10,7:22:54.18:2678,54,0	1/1:9,6:18:45.62:2269,46,0	1/1:11,7:19:42.14:1870,42,0	0/0:28,0:27:81.21:0,81,2736	1/1:17,11:29:84.28:4393,84,0	1/1:10,20:34:84.29:5118,84,0	1/1:3,1:4:6.02:395,6,0
chr10	100472896	.	CT	C	2644.99	PASS	AB=0.846;AC=34;AF=0.607;AN=56;BaseQRankSum=4.488;DP=536;FS=0.906;HRun=13;HaplotypeScore=100.7958;InbreedingCoeff=0.7891;MQ=61.31;MQ0=7;MQRankSum=-1.623;QD=7.76;ReadPosRankSum=1.012;VQSLOD=2.8907;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,1:24:20.84:110,21,0	0/0:11,1:12:6.09:0,6,169	0/1:19,0:10:2.81:3,0,37	0/0:14,0:10:11.75:0,12,83	0/0:19,0:19:16:0,16,236	1/1:8,5:13:17.25:129,17,0	1/1:5,4:10:15.52:97,16,0	1/1:14,20:34:18.38:377,18,0	1/1:10,5:15:23.01:144,23,0	0/0:24,1:25:45.48:0,45,419	0/0:24,0:24:20.74:0,21,243	1/1:23,3:26:30.76:189,31,0	0/0:20,0:20:38.41:0,38,299	1/1:15,2:17:18.36:111,18,0	0/0:15,0:15:22.19:0,22,142	1/1:16,4:20:34.26:202,34,0	0/0:25,1:28:32.59:0,33,402	0/0:18,0:17:35.30:0,35,283	0/1:10,8:18:31.97:128,0,32	1/1:14,10:24:45.89:303,46,0	1/1:2,2:4:8.88:63,9,0	1/1:20,1:20:0.99:118,1,0	1/1:18,1:18:32.21:196,32,0	1/1:14,2:14:12.20:83,12,0	0/0:20,0:20:30.28:0,30,277	1/1:18,11:29:6.42:257,6,0	1/1:12,3:14:22.04:155,22,0	1/1:9,6:15:25.96:191,26,0
chr10	100472907	.	T	TTG	2289.59	PASS	AB=0.988;AC=15;AF=0.268;AN=56;BaseQRankSum=0.537;DP=535;FS=5.339;HRun=0;HaplotypeScore=122.0709;InbreedingCoeff=0.7405;MQ=52.43;MQ0=11;MQRankSum=-0.166;QD=12.65;ReadPosRankSum=0.074;VQSLOD=3.3718;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,12:21:43.97:449,44,0	0/0:13,0:13:35.63:0,36,346	0/1:16,0:5:0.94:1,0,61	0/0:12,0:8:13.28:0,13,87	0/0:20,0:20:38.56:0,39,392	0/0:17,0:16:35.97:0,36,236	0/0:8,0:8:16.24:0,16,87	0/0:35,0:35:56.78:0,57,471	0/0:13,0:13:11.39:0,11,145	0/0:22,0:22:59.91:0,60,670	0/0:21,0:21:45.16:0,45,443	1/1:15,7:22:29.03:485,29,0	0/0:18,0:18:52.84:0,53,460	1/1:16,6:23:19.86:409,20,0	0/0:14,0:14:33.28:0,33,278	0/0:19,0:19:20.01:0,20,218	0/0:30,0:30:61.28:0,61,647	0/0:19,0:18:41.84:0,42,403	0/0:18,0:18:44.40:0,44,313	0/1:25,0:26:14.44:14,0,201	0/0:4,0:4:7.37:0,7,39	1/1:10,8:19:11.93:487,12,0	1/1:12,8:20:35.01:506,35,0	1/1:6,8:12:15.53:116,16,0	0/0:18,0:18:43.58:0,44,449	0/0:35,0:34:61.75:0,62,515	0/0:18,0:17:34.66:0,35,227	0/1:16,0:15:8.66:9,0,122
chr10	100472913	.	CT	C	1345.54	PASS	AB=0.828;AC=35;AF=0.625;AN=56;BaseQRankSum=6.577;DP=505;FS=2.799;HRun=15;HaplotypeScore=107.1904;InbreedingCoeff=0.3587;MQ=51.62;MQ0=14;MQRankSum=-2.535;QD=3.65;ReadPosRankSum=-0.603;VQSLOD=1.3275;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:18:28.08:145,28,0	0/0:11,0:12:20.35:0,20,181	1/1:14,0:4:0.45:1,0,0	0/0:12,0:8:2.92:0,3,18	0/0:17,1:20:4.04:0,4,34	1/1:6,7:15:3.38:125,3,0	1/1:9,1:9:4.87:25,5,0	1/1:28,4:34:18.53:107,19,0	1/1:11,3:14:17.01:104,17,0	0/0:23,0:23:2.89:0,3,98	0/0:19,0:19:15.33:0,15,102	1/1:15,0:20:22.78:137,23,0	0/0:16,0:16:15.44:0,15,214	1/1:17,0:21:13.06:92,13,0	0/1:13,1:14:1.10:1,0,89	0/1:10,8:19:17.62:95,0,18	0/0:32,2:34:1.63:0,2,234	0/1:16,0:14:1.55:2,0,21	0/1:14,1:17:10.45:10,0,14	0/1:12,10:23:16.63:91,0,17	1/1:3,2:5:2.89:19,3,0	1/1:16,0:17:7.05:60,7,0	1/1:13,0:16:20.38:124,20,0	1/1:12,0:11:11.71:75,12,0	0/1:17,0:19:3.10:3,0,103	0/1:22,8:31:15.35:112,0,15	1/1:11,5:15:14.66:96,15,0	1/1:6,4:9:15.50:95,15,0
chr10	100472938	.	GGGACCGAACCCAGGGCCTTGTGCTTCCTA	G	4419.47	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=7.357;DP=389;FS=12.588;HRun=0;HaplotypeScore=250.0393;InbreedingCoeff=0.8699;MQ=39.35;MQ0=54;MQRankSum=-5.521;QD=107.79;ReadPosRankSum=5.793;VQSLOD=2.8398;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:3.01:0,3,192	0/0:9,0:9:24.08:0,24,2050	./.	./.	0/0:15,0:15:21.07:0,21,2576	0/0:15,0:14:39.12:0,39,3395	0/0:4,0:3:9.03:0,9,847	0/0:21,0:20:57.20:0,57,4708	0/0:13,0:13:36.12:0,36,4270	0/0:8,0:8:24.08:0,24,3113	0/0:15,0:15:33.11:0,33,4270	1/1:4,5:9:15.05:1164,15,0	0/0:12,0:12:30.10:0,30,3417	1/1:6,6:12:15.05:1161,15,0	0/0:10,0:10:24.08:0,24,3233	0/0:20,0:20:51.13:0,51,4000	0/0:27,0:26:53.62:0,54,6708	0/0:11,0:8:18.06:0,18,2411	0/0:20,0:20:60.21:0,60,5229	0/0:23,0:23:51.18:0,51,5504	0/0:7,0:7:18.06:0,18,2070	1/1:4,3:6:9.03:698,9,0	1/1:5,5:10:15.05:1164,15,0	1/1:2,1:3:3.01:233,3,0	0/0:15,0:15:39.13:0,39,4287	0/0:17,0:16:30.10:0,30,3116	0/0:14,0:14:30.10:0,30,3566	0/0:7,0:6:18.06:0,18,1980
chr10	100473168	.	T	TTTTC	3437.13	PASS	AB=0.649;AC=15;AF=0.288;AN=52;BaseQRankSum=-0.339;DP=535;FS=3.228;HRun=0;HaplotypeScore=108.7780;InbreedingCoeff=0.8776;MQ=57.03;MQ0=1;MQRankSum=1.356;QD=20.71;ReadPosRankSum=-3.171;VQSLOD=3.0462;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:15.01:0,15,186	0/0:4,0:4:6.02:0,6,94	./.	./.	0/0:16,0:16:30.10:0,30,467	1/1:6,13:19:18.06:412,18,0	1/1:19,1:21:20.59:299,21,0	1/1:28,0:28:24.84:255,25,0	0/0:10,0:10:21.07:0,21,328	0/0:20,0:20:27.08:0,27,384	0/0:20,0:20:39.11:0,39,564	0/0:23,0:23:32.08:0,32,322	0/0:26,0:26:57.19:0,57,888	0/0:17,0:17:19.76:0,20,191	0/0:22,0:22:33.28:0,33,537	1/1:13,5:18:33.10:706,33,0	0/0:30,0:30:47.56:0,48,743	0/0:29,0:29:36.66:0,37,637	1/1:19,9:27:27.55:581,28,0	0/1:11,12:24:4.75:676,0,5	1/1:8,9:17:11.83:225,12,0	0/0:16,0:16:32.97:0,33,393	0/0:16,0:16:20.82:0,21,197	0/0:14,0:15:6.90:0,7,233	0/0:22,0:24:39.09:0,39,559	0/0:27,0:27:36.11:0,36,542	1/1:3,7:11:12.04:283,12,0	0/0:23,0:23:27.08:0,27,399
chr10	100473195	.	TCTTTCTTTCTTC	T	4765.91	PASS	AB=0.842;AC=11;AF=0.212;AN=52;BaseQRankSum=-2.552;DP=530;FS=0.428;HRun=0;HaplotypeScore=209.1089;InbreedingCoeff=0.8272;MQ=53.57;MQ0=9;MQRankSum=-3.068;QD=45.39;ReadPosRankSum=0.191;VQSLOD=4.4729;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:17:22:513,22,0	0/0:5,0:5:12.03:0,12,307	./.	./.	0/0:26,0:26:71.48:0,71,1989	0/0:22,0:22:39.07:0,39,994	0/0:19,0:19:43.07:0,43,546	0/0:31,0:27:70.07:0,70,623	0/0:13,0:13:36.09:0,36,1107	0/0:17,0:17:42.02:0,42,1098	0/0:24,0:24:69.02:0,69,1529	1/1:19,3:22:53.93:1215,54,0	0/0:24,0:24:69.19:0,69,2176	1/1:14,5:19:47.99:856,48,0	0/0:23,0:23:66.12:0,66,1468	0/0:21,0:21:62.47:0,62,1032	0/0:26,0:26:16.54:0,17,1542	0/0:30,0:29:71.85:0,72,1994	0/0:23,0:22:48.93:0,49,814	0/0:20,0:20:28:0,28,897	0/0:13,0:13:0.67:0,1,380	1/1:15,2:17:45.13:951,45,0	1/1:12,2:14:38.99:581,39,0	0/1:13,3:16:56.85:650,0,57	0/0:21,0:21:48.12:0,48,1048	0/0:25,0:25:69.20:0,69,1957	0/0:17,0:17:36.02:0,36,675	0/0:18,0:17:45.06:0,45,1130
chr10	100473266	.	CTCTT	C	2647.95	PASS	AB=0.944;AC=17;AF=0.315;AN=54;BaseQRankSum=2.046;DP=602;FS=8.913;HRun=0;HaplotypeScore=130.6553;InbreedingCoeff=0.6507;MQ=52.79;MQ0=8;MQRankSum=-0.521;QD=11.72;ReadPosRankSum=1.903;VQSLOD=2.8328;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,15:22:25.03:510,25,0	0/0:11,0:11:27.09:0,27,642	1/1:27,0:4:2.22:7,2,0	./.	0/0:26,0:26:33.09:0,33,673	0/0:14,0:19:33.11:0,33,599	0/0:19,0:19:17.85:0,18,279	0/0:14,0:14:12.03:0,12,168	0/0:14,0:17:27.09:0,27,516	0/0:18,0:18:33.11:0,33,714	0/0:17,0:17:18.06:0,18,409	1/1:14,6:21:30.09:452,30,0	0/0:16,0:16:36.12:0,36,794	1/1:7,18:25:8.13:492,8,0	0/0:28,0:28:54.18:0,54,1152	0/0:15,0:22:39.12:0,39,655	0/0:29,0:30:58.86:0,59,1233	0/0:33,0:34:63.16:0,63,1391	0/0:25,0:23:2.43:0,2,342	0/1:19,1:20:14.45:14,0,698	0/0:8,0:8:4.26:0,4,46	1/1:6,17:23:31.66:466,32,0	1/1:7,13:20:20.19:330,20,0	1/1:6,16:22:33.11:520,33,0	0/1:22,2:24:34.50:35,0,1151	0/0:19,0:21:39.01:0,39,579	0/1:21,1:21:8.22:8,0,635	0/0:14,0:14:26.91:0,27,335
chr10	100473545	.	A	AT	4800.03	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-2.778;DP=499;FS=1.685;HRun=8;HaplotypeScore=106.6188;InbreedingCoeff=0.9337;MQ=80.33;MQ0=1;MQRankSum=-1.427;QD=28.92;ReadPosRankSum=-1.555;VQSLOD=3.3766;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:30.86:0,31,151	0/0:11,0:11:30:0,30,270	0/0:28,0:23:7.64:0,8,119	0/0:23,1:17:8.45:0,8,50	0/0:26,0:26:72:0,72,649	1/1:3,20:23:63.17:716,63,0	1/1:6,5:11:24.05:258,24,0	1/1:2,28:31:86.81:903,87,0	1/1:2,4:6:12.04:138,12,0	0/0:17,0:17:44.99:0,45,404	0/0:21,0:21:54.01:0,54,487	0/0:22,0:22:55.74:0,56,269	0/0:19,0:19:53.96:0,54,474	0/0:23,0:23:64.71:0,65,322	0/0:20,0:20:50.80:0,51,460	1/1:7,9:16:42.04:436,42,0	0/0:15,0:15:44.98:0,45,403	0/0:14,0:14:42:0,42,379	1/1:3,11:14:33.07:361,33,0	1/1:2,14:16:45.12:504,45,0	1/1:1,0:1:3:25,3,0	0/0:20,0:20:53.94:0,54,297	0/0:22,0:22:48.27:0,48,258	0/0:10,0:10:19.91:0,20,107	0/0:26,0:26:68.98:0,69,610	1/1:6,20:26:69.13:812,69,0	1/1:4,16:20:51.14:578,51,0	1/1:0,2:2:6.02:69,6,0
chr10	100473553	.	TAAA	T	3931.57	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=4.018;DP=516;FS=8.174;HRun=8;HaplotypeScore=133.8864;InbreedingCoeff=0.9744;MQ=83.45;MQ0=1;MQRankSum=-9.772;QD=36.40;ReadPosRankSum=2.211;VQSLOD=1.9610;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:15:33.11:485,33,0	0/0:11,0:11:30.10:0,30,646	0/0:38,0:31:66.86:0,67,1099	0/0:27,0:19:19.08:0,19,488	0/0:26,0:25:72.25:0,72,1548	0/0:26,0:26:75.25:0,75,1240	0/0:9,0:9:23.57:0,24,362	0/0:33,0:33:93.31:0,93,1499	0/0:7,0:7:21.07:0,21,385	0/0:20,0:20:57.20:0,57,1225	0/0:19,0:19:51.18:0,51,1093	1/1:1,19:20:57.19:839,57,0	0/0:20,0:20:48.16:0,48,1034	1/1:2,21:23:66.22:971,66,0	0/0:18,0:18:48.16:0,48,1033	0/0:14,0:14:32.94:0,33,486	0/0:16,0:16:48.16:0,48,1028	0/0:17,0:17:51.16:0,51,1050	0/0:15,0:15:38.72:0,39,625	0/0:18,0:18:51.17:0,51,871	./.	1/1:4,16:20:51.15:731,51,0	1/1:4,15:19:45.13:641,45,0	1/1:1,10:11:18.05:264,18,0	0/0:25,0:25:69.22:0,69,1413	0/0:28,0:28:77.31:0,77,1211	0/0:17,0:17:51.17:0,51,810	0/0:2,0:2:6.02:0,6,96
chr10	100473578	.	A	AC	4573.99	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-6.539;DP=515;FS=0.394;HRun=8;HaplotypeScore=104.0295;InbreedingCoeff=0.9183;MQ=78.31;MQ0=1;MQRankSum=-0.401;QD=22.31;ReadPosRankSum=-1.643;VQSLOD=3.8812;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:19:28.52:0,29,84	0/0:13,0:13:32.98:0,33,296	0/1:35,0:30:1.39:1,0,274	0/0:24,0:20:36.60:0,37,279	0/0:28,0:27:71.97:0,72,641	1/1:4,17:21:54.15:612,54,0	1/1:0,13:13:36.11:415,36,0	1/1:9,13:22:48.12:536,48,0	1/1:2,9:11:5.64:319,6,0	0/0:22,0:22:60.01:0,60,545	0/0:19,0:19:45.01:0,45,412	0/0:2,0:22:40.74:0,41,120	0/0:13,0:13:39:0,39,352	0/0:4,0:23:37.91:0,38,111	0/0:18,0:18:41.99:0,42,379	1/1:2,10:12:33.09:371,33,0	0/0:17,0:17:48.02:0,48,439	0/0:17,0:17:45.02:0,45,412	1/1:8,3:11:18.04:198,18,0	1/1:4,22:26:63.19:724,63,0	1/1:0,6:6:12.04:138,12,0	0/0:1,0:24:39.95:0,40,117	0/0:2,0:25:42.78:0,43,126	0/0:0,0:8:16.53:0,17,49	0/0:18,0:18:51:0,51,458	1/1:5,19:24:72.02:785,72,0	1/1:9,11:20:36.09:404,36,0	1/1:2,2:4:6.02:69,6,0
chr10	100475562	.	G	GC	4950.29	PASS	AB=0.684;AC=20;AF=0.357;AN=56;BaseQRankSum=-10.878;DP=552;FS=0.728;HRun=9;HaplotypeScore=57.7767;InbreedingCoeff=0.6912;MQ=76.61;MQ0=1;MQRankSum=-1.213;QD=22.00;ReadPosRankSum=1.049;VQSLOD=5.5622;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:89.88:0,90,769	0/0:3,0:3:8.98:0,9,74	0/0:24,0:23:28.74:0,29,229	0/1:15,0:16:25.32:25,0,151	0/0:13,0:13:32.99:0,33,286	1/1:1,19:21:53.98:578,54,0	1/1:5,15:20:44.91:496,45,0	1/1:4,6:11:20.85:194,21,0	1/1:1,12:14:38.89:398,39,0	0/0:22,0:22:56.97:0,57,492	0/0:20,0:20:54.55:0,55,440	0/0:23,0:23:62.94:0,63,537	0/0:25,0:25:74.94:0,75,640	0/0:23,0:23:59.94:0,60,516	0/0:17,0:17:44.97:0,45,387	1/1:4,24:29:69.02:744,69,0	0/0:24,0:24:68.99:0,69,599	0/0:16,0:16:44.96:0,45,386	0/1:4,10:15:13.21:288,0,13	1/1:1,16:17:42.07:451,42,0	0/1:8,17:25:30.04:383,0,30	0/0:26,0:26:53.04:0,53,551	0/0:11,0:11:32.98:0,33,284	0/0:20,0:20:47.98:0,48,417	0/0:20,0:20:53.73:0,54,454	0/1:7,11:18:10:356,0,10	1/1:2,30:32:52.06:803,52,0	1/1:0,7:7:21.06:232,21,0
chr10	100475831	.	C	CA	4017.27	PASS	AB=0.701;AC=30;AF=0.536;AN=56;BaseQRankSum=-5.084;DP=584;FS=1.320;HRun=14;HaplotypeScore=80.8899;InbreedingCoeff=0.3619;MQ=74.96;MQ0=1;MQRankSum=2.171;QD=9.66;ReadPosRankSum=-0.219;VQSLOD=3.0533;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,20:27:3.83:356,4,0	0/0:9,0:10:25.47:0,25,153	0/0:26,0:21:8.54:0,9,79	0/0:10,0:11:7.84:0,8,41	0/0:17,0:18:34.38:0,34,214	1/1:11,14:29:1.39:329,1,0	0/1:11,6:17:18.85:212,0,19	1/1:17,20:40:10.75:416,11,0	0/1:7,11:18:1.15:179,0,1	0/0:18,0:18:22.36:0,22,140	0/0:24,0:24:3.23:0,3,225	1/1:5,11:17:7.53:171,8,0	0/0:20,0:24:26.36:0,26,151	1/1:6,16:22:21:185,21,0	0/0:13,0:15:1.49:0,1,71	1/1:9,22:33:6.24:278,6,0	0/0:20,0:21:36.94:0,37,222	0/1:17,1:19:9.51:10,0,153	1/1:9,8:18:10.52:174,11,0	0/1:12,16:33:12.62:364,0,13	1/1:1,8:9:18:158,18,0	0/1:6,9:15:8.50:181,0,9	1/1:7,16:23:25.53:220,26,0	1/1:4,9:14:20.84:172,21,0	0/1:21,3:24:5.45:5,0,222	0/1:8,17:25:2.27:327,0,2	0/1:6,19:27:8.89:148,0,9	1/1:0,6:6:15:132,15,0
chr10	100478320	.	AC	A	5727.18	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=10.879;DP=531;FS=6.585;HRun=8;HaplotypeScore=53.4691;InbreedingCoeff=0.9979;MQ=77.47;MQ0=0;MQRankSum=-1.761;QD=25.01;ReadPosRankSum=-0.261;VQSLOD=5.3991;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:42.13:0,42,507	0/0:13,0:13:36.11:0,36,435	0/0:15,0:15:35.67:0,36,390	0/0:12,0:12:26.99:0,27,298	0/0:31,0:31:84.26:0,84,1013	1/1:0,22:22:60.10:579,60,0	1/1:2,6:8:18.03:174,18,0	1/1:6,36:42:99:1007,108,0	1/1:0,22:22:57.09:550,57,0	0/0:23,0:23:63.18:0,63,750	0/0:23,0:23:57.16:0,57,669	0/0:19,0:19:48.15:0,48,580	0/0:19,0:19:48.12:0,48,556	0/0:17,0:17:51.14:0,51,593	0/0:24,0:24:66.19:0,66,785	1/1:0,12:12:30.05:290,30,0	0/0:15,0:15:42.11:0,42,495	0/0:12,0:12:36.09:0,36,421	1/1:6,13:19:36.05:348,36,0	1/1:2,24:26:72.11:695,72,0	1/1:0,9:9:24.04:232,24,0	0/0:16,0:16:42.12:0,42,497	0/0:19,0:19:48.15:0,48,580	0/0:9,0:9:24.07:0,24,290	0/0:16,0:16:42.13:0,42,507	1/1:0,23:23:69.11:666,69,0	1/1:1,32:33:87.14:840,87,0	1/1:1,12:13:36.06:348,36,0
chr10	100478481	.	CTACTT	C	12336.20	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.180;DP=562;FS=5.758;HRun=0;HaplotypeScore=113.2612;InbreedingCoeff=0.9983;MQ=76.60;MQ0=0;MQRankSum=-7.236;QD=52.49;ReadPosRankSum=1.583;VQSLOD=5.3234;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.22:0,63,1931	0/0:13,0:13:36.12:0,36,1132	0/0:19,0:19:47.73:0,48,1172	0/0:11,0:11:21.06:0,21,409	0/0:23,0:23:69.24:0,69,2120	1/1:1,25:26:69.24:1497,69,0	1/1:1,15:16:36.12:774,36,0	1/1:5,31:36:93.27:1823,93,0	1/1:1,15:16:36.12:780,36,0	0/0:25,0:25:72.25:0,72,2123	0/0:26,0:26:69.24:0,69,2084	0/0:25,0:25:75.26:0,75,2193	0/0:21,0:21:60.21:0,60,1828	0/0:32,0:32:87.30:0,87,2547	0/0:20,0:20:54.19:0,54,1666	1/1:1,20:21:54.19:1171,54,0	0/0:14,0:14:42.14:0,42,1300	0/0:15,0:15:39.13:0,39,1125	1/1:1,14:15:39.35:819,39,0	1/1:1,23:24:57.20:1235,57,0	1/1:4,12:16:27.09:586,27,0	0/0:9,0:9:24.08:0,24,761	0/0:22,0:22:66.21:0,66,2019	0/0:18,0:18:51.17:0,51,1524	0/0:13,0:13:36.11:0,36,980	1/1:0,29:29:84.27:1767,84,0	1/1:3,26:29:66.12:1430,66,0	1/1:0,7:7:21.07:455,21,0
chr10	100479180	.	TG	T	6421.03	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=9.535;DP=531;FS=0.000;HRun=10;HaplotypeScore=63.6181;InbreedingCoeff=0.8803;MQ=76.84;MQ0=0;MQRankSum=-0.646;QD=18.40;ReadPosRankSum=4.230;VQSLOD=5.3850;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:74.99:651,75,0	0/0:9,0:9:26.10:0,26,271	0/1:27,0:24:38.55:39,0,129	0/0:19,0:14:16.04:0,16,149	0/0:32,0:32:73.97:0,74,775	1/1:2,26:29:74.02:631,74,0	1/1:2,11:13:29.92:252,30,0	1/1:7,13:21:33.35:294,33,0	1/1:1,11:12:32.96:279,33,0	0/0:14,0:14:21.06:0,21,232	0/0:18,0:18:19.32:0,19,392	1/1:2,15:17:35.83:312,36,0	0/0:26,0:26:68.97:0,69,701	1/1:2,21:23:50.99:443,51,0	0/0:17,1:18:16.04:0,16,389	1/1:3,14:16:35.99:313,36,0	0/0:12,0:12:36.01:0,36,364	0/0:11,1:12:1.02:0,1,229	1/1:4,12:17:41.03:344,41,0	1/1:3,24:27:68.91:586,69,0	1/1:5,9:14:20.99:182,21,0	1/1:4,11:15:32.98:286,33,0	1/1:2,18:20:50.99:443,51,0	1/1:4,6:10:14.99:130,15,0	0/0:22,0:22:34.17:0,34,505	1/1:5,19:24:29.85:482,30,0	1/1:5,19:24:59.98:520,60,0	1/1:1,9:10:26.99:234,27,0
chr10	100481488	.	A	AG	1436.14	PASS	AB=0.803;AC=10;AF=0.179;AN=56;BaseQRankSum=13.056;DP=793;FS=1.223;HRun=1;HaplotypeScore=118.5628;InbreedingCoeff=-0.2290;MQ=57.20;MQ0=6;MQRankSum=2.044;QD=5.36;ReadPosRankSum=5.403;VQSLOD=0.6419;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,143,1838	0/0:16,0:15:45.14:0,45,607	0/0:32,0:14:38.98:0,39,448	0/0:31,0:16:44.40:0,44,496	0/0:31,0:31:87.14:0,87,1162	0/1:22,8:30:99:169,0,138	0/1:21,6:27:97.43:97,0,146	0/0:40,0:40:1.01:0,1,337	0/1:22,8:30:72.51:209,0,73	0/0:30,0:30:86.65:0,87,1164	0/0:21,0:21:60.20:0,60,834	0/0:35,0:35:99:0,102,1367	0/0:29,0:29:87.29:0,87,1199	0/0:31,0:30:87.17:0,87,1166	0/0:29,0:29:83.20:0,83,1085	0/1:25,14:39:44.11:433,0,44	0/0:16,0:16:45.02:0,45,579	0/0:28,0:28:78.20:0,78,1046	0/1:11,3:13:61.87:113,0,62	0/1:30,6:36:99:103,0,190	0/1:25,6:31:99:110,0,166	0/0:19,0:19:54.18:0,54,751	0/0:26,0:26:75.25:0,75,1033	0/0:31,0:31:84.13:0,84,1145	0/0:30,0:30:87.29:0,87,1199	0/1:17,5:22:71.96:72,0,196	0/1:20,10:30:86.85:197,0,87	0/1:7,2:9:30.93:77,0,31
chr10	100481489	.	A	AG	1379.50	PASS	AB=0.805;AC=10;AF=0.179;AN=56;BaseQRankSum=13.510;DP=796;FS=1.699;HRun=0;HaplotypeScore=118.5872;InbreedingCoeff=-0.2305;MQ=57.27;MQ0=6;MQRankSum=3.124;QD=5.11;ReadPosRankSum=5.572;VQSLOD=3.1465;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,147,1853	0/0:17,0:16:45.13:0,45,608	0/0:31,0:13:36.06:0,36,431	0/0:30,0:15:41.14:0,41,433	0/0:31,0:31:87.26:0,87,1153	0/1:22,8:30:99:169,0,138	0/1:22,6:28:99:100,0,134	0/0:41,0:41:0.08:0,0,339	0/1:22,8:30:73.32:209,0,73	0/0:32,0:32:87.27:0,87,1160	0/0:21,0:21:63.18:0,63,852	0/0:34,0:34:99:0,102,1357	0/0:27,0:29:87.20:0,87,1156	0/0:32,0:32:82.03:0,82,1137	0/0:28,0:28:80.21:0,80,1056	0/1:25,13:39:62.20:400,0,62	0/0:17,0:17:48.02:0,48,593	0/0:27,0:27:75.21:0,75,1016	0/1:11,3:13:67.05:93,0,67	0/1:30,6:36:99:127,0,178	0/1:25,6:31:99:107,0,180	0/0:19,0:20:57.13:0,57,744	0/0:25,0:26:78.20:0,78,1040	0/0:30,0:30:66.33:0,66,1142	0/0:28,0:30:87.25:0,87,1182	0/1:19,5:24:44.43:44,0,201	0/1:19,10:29:87.82:197,0,88	0/1:7,2:9:31.01:77,0,31
chr10	100483096	.	T	TTC	20915.73	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-18.713;DP=682;FS=0.610;HRun=0;HaplotypeScore=67.5071;InbreedingCoeff=0.9389;MQ=86.32;MQ0=1;MQRankSum=-4.442;QD=49.21;ReadPosRankSum=2.810;VQSLOD=5.8180;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:72.25:1385,72,0	0/0:12,0:12:36.10:0,36,510	0/0:28,0:28:72.24:0,72,1080	0/0:17,0:17:42.11:0,42,588	0/0:31,0:31:90.24:0,90,1347	1/1:2,30:31:75.26:1430,75,0	1/1:1,20:21:48.16:927,48,0	1/1:1,36:37:99:1893,108,0	1/1:1,20:21:54.19:1042,54,0	0/0:29,0:29:84.29:0,84,1286	0/0:35,0:35:99:0,105,1541	1/1:1,14:16:39.13:753,39,0	0/0:16,0:16:48.16:0,48,731	1/1:1,23:25:57.20:1100,57,0	0/0:24,0:24:72.22:0,72,1059	1/1:0,28:29:81.28:1564,81,0	0/0:23,0:23:69.22:0,69,1032	0/0:23,0:23:63.21:0,63,962	1/1:2,20:22:63.19:1143,63,0	1/1:0,32:32:90.31:1728,90,0	1/1:0,20:20:45.09:869,45,0	1/1:0,16:16:48.16:926,48,0	1/1:1,23:26:60:1158,60,0	1/1:0,30:30:90.31:1738,90,0	0/0:19,0:19:54.16:0,54,785	1/1:3,26:28:0.14:1415,0,0	1/1:2,33:36:93.32:1789,93,0	1/1:0,5:5:3.01:58,3,0
chr10	100484215	.	AT	A	6289.67	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.077;DP=603;FS=11.076;HRun=9;HaplotypeScore=59.8312;InbreedingCoeff=0.9873;MQ=72.35;MQ0=0;MQRankSum=0.347;QD=23.47;ReadPosRankSum=-1.752;VQSLOD=4.4973;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:32:65.59:0,66,965	0/0:7,0:7:18.05:0,18,208	0/0:15,0:14:9.64:0,10,156	0/0:11,0:11:12.69:0,13,133	0/0:17,0:17:45.13:0,45,519	1/1:2,23:25:63.03:577,63,0	1/1:3,24:27:66.03:604,66,0	1/1:3,35:38:99:945,105,0	1/1:2,17:19:48.02:439,48,0	0/0:17,0:17:39.10:0,39,436	0/0:18,0:18:51.15:0,51,588	0/0:20,0:21:53.98:0,54,593	0/0:20,0:20:60.17:0,60,682	0/0:30,0:30:84.20:0,84,946	0/0:31,0:31:84.25:0,84,969	1/1:4,20:24:57.03:522,57,0	0/0:30,0:31:81.06:0,81,905	0/0:17,0:17:48.10:0,48,539	1/1:2,17:19:50.88:435,51,0	1/1:0,20:20:56.91:503,57,0	1/1:2,22:24:60.03:549,60,0	0/0:17,0:17:48.13:0,48,545	0/0:13,0:13:36.11:0,36,416	0/0:24,0:24:66.18:0,66,751	0/0:14,0:14:30.09:0,30,346	1/1:1,22:23:34.39:562,34,0	1/1:2,39:41:99:934,102,0	1/1:0,8:8:24.01:220,24,0
chr10	100484703	.	TGA	T	1394.35	PASS	AC=22;AF=0.440;AN=50;BaseQRankSum=-1.830;DP=185;FS=26.173;HRun=0;HaplotypeScore=37.1004;InbreedingCoeff=0.6856;MQ=86.04;MQ0=4;MQRankSum=-3.989;QD=19.37;ReadPosRankSum=2.593;VQSLOD=1.2040;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:5.99:0,6,48	0/0:1,0:1:3:0,3,25	0/0:9,0:4:5.17:0,5,69	0/0:35,0:19:18.73:0,19,169	0/0:6,0:6:14.97:0,15,122	1/1:5,2:7:17.99:156,18,0	1/1:1,0:1:3:25,3,0	1/1:26,0:25:69.20:557,69,0	1/1:1,2:3:9:81,9,0	0/0:6,0:6:18.02:0,18,170	./.	0/0:1,0:2:1.99:0,2,24	0/0:3,0:3:9:0,9,88	0/0:1,0:1:3:0,3,25	0/0:1,0:1:3:0,3,25	1/1:1,1:2:6:52,6,0	0/0:18,0:18:25.79:0,26,381	0/0:16,0:16:31.25:0,31,403	1/1:11,0:11:32.82:257,33,0	1/1:1,1:2:6:53,6,0	1/1:2,0:2:5.99:49,6,0	./.	0/0:6,0:6:11.99:0,12,100	./.	0/0:2,0:2:3:0,3,25	1/1:1,0:1:2.97:20,3,0	1/1:10,3:13:32.20:264,32,0	1/1:4,0:4:8.87:58,9,0
chr10	100484728	.	TATATATATATATATATATAA	T	1640.73	PASS	AC=16;AF=0.615;AN=26;BaseQRankSum=0.884;DP=106;FS=1.072;HRun=0;HaplotypeScore=73.0097;InbreedingCoeff=0.6380;MQ=68.06;MQ0=6;MQRankSum=-3.243;QD=52.93;ReadPosRankSum=-0.479;VQSLOD=2.3594;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:29,0:11:9:0,9,81	./.	1/1:1,1:2:6.02:309,6,0	./.	1/1:10,0:9:23.71:159,24,0	1/1:0,2:2:6.02:311,6,0	./.	./.	0/0:1,0:1:3.01:0,3,272	0/0:1,0:1:3.01:0,3,273	./.	./.	1/1:1,1:2:6.01:180,6,0	0/0:17,0:17:30.08:0,30,2182	0/0:18,0:18:38.87:0,39,2786	1/1:4,0:4:2.97:20,3,0	1/1:1,1:2:6.02:257,6,0	./.	./.	./.	./.	./.	1/1:2,0:2:2.94:19,3,0	1/1:4,3:7:14.94:504,15,0	./.
chr10	100484746	.	TAA	T	1241.36	PASS	AB=1.000;AC=21;AF=0.420;AN=50;BaseQRankSum=-1.117;DP=139;FS=11.251;HRun=4;HaplotypeScore=29.5254;InbreedingCoeff=0.6248;MQ=60.11;MQ0=3;MQRankSum=-1.803;QD=19.40;ReadPosRankSum=1.765;VQSLOD=-0.2099;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:5.97:0,6,47	./.	0/0:3,0:2:0:0,0,0	0/0:16,0:5:5.93:0,6,47	0/0:2,0:2:6:0,6,54	1/1:3,0:3:9:82,9,0	1/1:2,0:2:5.99:50,6,0	1/1:23,0:23:68.71:558,69,0	1/1:2,0:2:6.01:56,6,0	0/0:1,0:1:3:0,3,29	0/0:4,0:4:12.01:0,12,111	0/0:3,0:3:9.02:0,9,99	0/0:2,0:2:6.01:0,6,66	./.	0/0:2,0:2:6:0,6,54	1/1:4,0:4:9:78,9,0	0/0:18,0:18:20.78:0,21,348	0/0:15,0:15:21.26:0,21,291	1/1:3,4:7:14.95:121,15,0	1/1:2,0:2:6:53,6,0	1/1:1,0:1:2.99:23,3,0	./.	0/0:2,0:2:6:0,6,54	0/0:2,0:2:6:0,6,54	0/0:3,0:3:9.01:0,9,83	0/1:4,0:3:16.02:61,0,16	1/1:13,0:13:32.86:263,33,0	1/1:3,0:3:8.97:70,9,0
chr10	100490014	.	G	GAA	4235.22	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-2.873;DP=577;FS=1.769;HRun=12;HaplotypeScore=77.9855;InbreedingCoeff=0.8984;MQ=57.28;MQ0=21;MQRankSum=-3.095;QD=18.41;ReadPosRankSum=-2.391;VQSLOD=3.7255;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:40:72.13:0,72,748	0/0:8,0:7:15.01:0,15,139	0/1:14,0:7:16.28:16,0,87	0/0:6,0:6:10.50:0,10,82	0/0:32,0:32:58.92:0,59,535	1/1:8,6:17:33.79:387,34,0	1/1:6,10:14:24.04:304,24,0	1/1:15,5:21:36.07:382,36,0	1/1:1,8:10:21.01:258,21,0	0/0:21,0:23:41.50:0,41,465	0/0:21,0:22:50.54:0,51,492	0/0:21,0:21:50.97:0,51,466	0/0:22,0:21:46.39:0,46,411	0/0:16,0:15:35.82:0,36,317	0/0:13,0:15:20.51:0,21,220	1/1:8,11:18:34.32:436,34,0	0/0:40,0:37:95.17:0,95,823	0/0:32,0:31:40.36:0,40,353	1/1:12,13:24:12.03:310,12,0	1/1:3,20:24:46.53:563,47,0	1/1:3,11:14:12.04:168,12,0	0/0:16,0:18:35.15:0,35,299	0/0:21,0:21:41.57:0,42,417	0/0:13,0:13:33.02:0,33,305	0/0:12,0:13:14.82:0,15,186	1/1:9,19:30:68.12:768,68,0	1/1:12,10:22:43.99:550,44,0	1/1:10,1:10:8.98:91,9,0
chr10	100494932	.	T	TCACACACACA	18386.64	PASS	AB=0.608;AC=21;AF=0.375;AN=56;BaseQRankSum=-4.312;DP=755;FS=4.794;HRun=0;HaplotypeScore=206.6167;InbreedingCoeff=0.9008;MQ=63.35;MQ0=4;MQRankSum=-14.380;QD=61.70;ReadPosRankSum=-5.589;VQSLOD=3.4882;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:36:72.24:0,72,1962	0/0:14,0:14:36.12:0,36,1013	0/0:42,0:26:20.45:0,20,691	0/0:27,0:20:12.87:0,13,738	0/0:26,0:27:57.18:0,57,1620	1/1:9,12:25:33.11:1646,33,0	1/1:15,14:31:42.14:1994,42,0	1/1:52,0:52:99:2680,105,0	1/1:7,15:24:27.09:1358,27,0	0/0:25,0:26:48.16:0,48,1400	0/0:26,0:26:63.20:0,63,1711	0/0:30,0:31:90.31:0,90,2632	0/0:39,0:40:99:0,99,2696	0/0:28,0:28:72.25:0,72,2088	0/0:23,0:23:57.19:0,57,1660	1/1:13,12:27:48.16:2360,48,0	0/0:17,0:18:51.17:0,51,1490	0/0:19,0:22:28.92:0,29,1359	1/1:13,4:17:27.09:666,27,0	1/1:9,23:36:45.15:2204,45,0	1/1:11,6:19:12.04:604,12,0	0/0:26,0:28:63.22:0,63,1789	0/0:21,0:21:51.18:0,51,1509	0/0:23,0:24:60.21:0,60,1812	0/0:22,0:23:51.17:0,51,1372	0/1:11,3:31:15.92:2073,0,16	1/1:11,20:31:54.19:2648,54,0	1/1:4,0:4:6.02:154,6,0
chr10	100495732	.	TAA	T	6886.16	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=13.610;DP=612;FS=3.794;HRun=8;HaplotypeScore=71.8210;InbreedingCoeff=0.9914;MQ=73.02;MQ0=0;MQRankSum=-1.443;QD=30.61;ReadPosRankSum=-0.836;VQSLOD=4.8845;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,2122	0/0:14,0:14:33.11:0,33,558	0/0:15,0:15:36.12:0,36,560	0/0:11,0:11:27.09:0,27,421	0/0:19,0:19:51.17:0,51,858	1/1:4,17:21:42.13:512,42,0	1/1:1,21:22:60.18:732,60,0	1/1:6,23:29:69.19:828,69,0	1/1:3,19:22:45.13:547,45,0	0/0:28,0:28:72.25:0,72,1217	0/0:25,0:25:72.24:0,72,1200	0/0:25,0:25:69.23:0,69,1126	0/0:19,0:19:48.16:0,48,809	0/0:18,0:18:51.17:0,51,857	0/0:20,0:20:54.18:0,54,911	1/1:2,23:25:69.22:842,69,0	0/0:41,0:41:99:0,120,1980	0/0:15,0:15:45.15:0,45,734	1/1:1,12:13:33.10:402,33,0	1/1:3,15:18:42.13:512,42,0	1/1:0,23:23:66.21:805,66,0	0/0:17,0:17:48.16:0,48,808	0/0:25,0:25:75.26:0,75,1265	0/0:31,0:31:90.31:0,90,1522	0/0:18,0:18:45.15:0,45,738	1/1:2,25:27:75.21:900,75,0	1/1:0,19:19:57.18:695,57,0	1/1:0,6:6:9.03:110,9,0
chr10	100495844	.	AGTGTGTGT	A	1519.25	PASS	AB=0.867;AC=18;AF=0.333;AN=54;BaseQRankSum=5.140;DP=565;FS=11.250;HRun=0;HaplotypeScore=135.2933;InbreedingCoeff=0.6382;MQ=51.84;MQ0=16;MQRankSum=-7.211;QD=8.63;ReadPosRankSum=0.512;VQSLOD=2.1156;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:32:35.96:0,36,757	0/0:7,0:8:9.03:0,9,213	0/0:36,0:6:0.47:0,0,1	./.	0/0:14,0:14:24.08:0,24,728	1/1:17,4:20:5.32:83,5,0	1/1:9,9:19:0.51:1,1,0	0/1:24,0:23:38.78:39,0,41	1/1:9,10:18:5.54:150,6,0	0/0:15,0:18:23.01:0,23,695	0/0:11,0:10:15.05:0,15,466	0/0:21,0:24:45.13:0,45,1244	0/0:15,0:17:30.81:0,31,916	0/0:7,0:16:12.04:0,12,434	0/0:9,0:10:9.70:0,10,378	1/1:8,6:16:9.03:168,9,0	0/0:28,0:29:50.58:0,51,1535	0/0:22,0:23:33.08:0,33,1018	1/1:10,1:11:5.82:97,6,0	1/1:7,8:18:6.90:113,7,0	0/0:30,11:41:11.72:0,12,124	0/0:6,0:12:6.02:0,6,197	0/0:9,0:8:9.03:0,9,188	0/0:26,0:27:21.05:0,21,474	0/0:18,0:19:27.09:0,27,884	1/1:9,2:14:14.64:253,15,0	1/1:12,10:22:30.10:687,30,0	0/1:7,4:10:24.76:101,0,25
chr10	100498772	.	GGAGTCCCTGAGGGTGTGCAGGAATCATTTGGTGC	G	8590.31	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=9.542;DP=405;FS=4.336;HRun=0;HaplotypeScore=326.0761;InbreedingCoeff=0.8932;MQ=90.56;MQ0=2;MQRankSum=-8.161;QD=204.53;ReadPosRankSum=4.925;VQSLOD=3.7097;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,15543	0/0:9,0:9:27.09:0,27,3912	0/0:22,0:18:48.06:0,48,2965	0/0:29,0:21:49.75:0,50,3482	0/0:23,0:23:69.22:0,69,10389	1/1:0,4:4:12.04:1090,12,0	1/1:0,4:4:9.03:817,9,0	./.	1/1:0,4:4:12.04:1088,12,0	0/0:20,0:20:60.21:0,60,7784	0/0:19,0:19:51.18:0,51,7784	0/0:25,0:25:75.26:0,75,10985	0/0:27,0:27:81.28:0,81,11867	0/0:20,0:20:60.21:0,60,9490	0/0:17,0:17:48.16:0,48,7547	1/1:0,6:6:12.04:1088,12,0	0/0:27,0:27:75.23:0,75,10210	0/0:21,0:21:57.20:0,57,8500	1/1:0,1:1:3.01:273,3,0	1/1:0,6:6:9.03:817,9,0	1/1:0,3:3:6.02:498,6,0	0/0:12,0:12:36.12:0,36,5650	0/0:15,0:15:45.15:0,45,6284	0/0:20,0:20:57.20:0,57,7860	0/0:22,0:22:66.23:0,66,10037	1/1:0,7:7:21.07:1288,21,0	1/1:0,6:6:15.05:1360,15,0	1/1:0,1:1:3.01:272,3,0
chr10	100499715	.	A	ATATCTC	4791.36	PASS	AB=0.925;AC=25;AF=0.446;AN=56;BaseQRankSum=-1.358;DP=692;FS=69.611;HRun=0;HaplotypeScore=154.4310;InbreedingCoeff=0.7492;MQ=68.85;MQ0=18;MQRankSum=-2.721;QD=14.39;ReadPosRankSum=-4.461;VQSLOD=0.4679;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:68.59:0,69,608	0/0:20,0:20:50.21:0,50,461	0/0:43,0:22:36.69:0,37,361	0/0:56,0:22:42.87:0,43,377	0/0:30,0:30:59.88:0,60,485	1/1:20,0:20:41.67:361,42,0	1/1:23,0:23:45.70:431,46,0	1/1:46,0:46:97.09:924,97,0	1/1:20,0:19:42.34:434,42,0	0/1:17,0:24:99:171,0,326	0/0:19,0:19:38.18:0,38,348	0/0:18,0:18:31.95:0,32,430	0/1:19,0:17:61.85:62,0,239	0/0:9,0:13:27:0,27,296	0/0:15,0:17:47.79:0,48,675	1/1:2,24:27:8.85:142,9,0	0/0:28,0:33:71.22:0,71,676	0/1:31,0:30:91.21:91,0,571	1/1:15,0:15:31.55:238,32,0	1/1:27,0:27:59.52:479,60,0	1/1:18,0:18:27.35:275,27,0	0/0:15,0:14:38.03:0,38,437	0/0:22,0:22:40.36:0,40,364	0/0:11,0:17:27.01:0,27,397	0/0:23,0:23:50.17:0,50,419	1/1:35,0:35:7.50:671,8,0	1/1:25,0:25:56.37:462,56,0	1/1:3,0:3:6.46:50,6,0
chr10	100499767	.	CTGTG	C	5830.90	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=2.408;DP=540;FS=9.700;HRun=0;HaplotypeScore=101.6894;InbreedingCoeff=0.9968;MQ=60.66;MQ0=15;MQRankSum=-2.143;QD=29.90;ReadPosRankSum=-1.136;VQSLOD=3.9126;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:57.66:0,58,1009	0/0:9,0:9:24.08:0,24,396	0/0:13,0:9:27.04:0,27,510	0/0:24,0:16:38.85:0,39,665	0/0:13,0:13:24.08:0,24,388	1/1:14,0:14:32.57:428,33,0	1/1:22,0:21:20.49:436,20,0	1/1:2,22:24:63.12:922,63,0	1/1:17,0:18:18.67:430,19,0	0/0:28,0:28:75.68:0,76,1343	0/0:15,0:15:39.13:0,39,636	0/0:21,0:21:57.19:0,57,1064	0/0:23,0:21:54.18:0,54,933	0/0:19,0:19:48.14:0,48,742	0/0:28,0:28:74.75:0,75,1336	1/1:12,0:11:29.76:440,30,0	0/0:26,0:24:51.17:0,51,997	0/0:31,0:30:75.21:0,75,1413	1/1:18,0:15:41.50:679,42,0	1/1:18,0:17:39.13:635,39,0	1/1:20,0:20:30.19:530,30,0	0/0:15,0:14:27.09:0,27,512	0/0:16,0:16:42.14:0,42,747	0/0:23,0:23:51.17:0,51,999	0/0:12,0:12:30.10:0,30,489	1/1:24,0:23:30.66:467,31,0	1/1:16,0:15:37.81:503,38,0	1/1:9,0:9:24.06:361,24,0
chr10	100500473	.	T	TG	7957.78	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-13.389;DP=454;FS=2.721;HRun=0;HaplotypeScore=41.9661;InbreedingCoeff=0.9657;MQ=68.98;MQ0=1;MQRankSum=0.233;QD=36.67;ReadPosRankSum=1.090;VQSLOD=4.4476;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.20:0,66,875	0/0:3,0:3:9.03:0,9,126	0/0:12,0:8:15:0,15,171	0/0:14,0:10:8.31:0,8,132	0/0:27,0:27:78.18:0,78,1034	1/1:0,24:24:54.18:769,54,0	1/1:0,10:10:24.08:342,24,0	1/1:1,25:26:72.13:883,72,0	1/1:0,9:9:18.06:256,18,0	0/0:24,0:24:72.21:0,72,956	0/0:19,0:19:57.13:0,57,740	0/0:13,0:13:39.12:0,39,515	0/0:6,0:6:18.05:0,18,235	0/0:10,0:10:30.08:0,30,387	0/0:11,0:11:33.10:0,33,431	1/1:1,12:13:36.12:514,36,0	0/0:14,0:14:42.12:0,42,567	0/0:10,0:10:30.10:0,30,418	1/1:0,23:23:69.17:912,69,0	1/1:1,25:26:69.22:984,69,0	1/1:0,4:4:9.03:128,9,0	0/0:5,0:5:14.98:0,15,130	0/0:11,0:11:33.09:0,33,415	0/0:7,0:7:21.06:0,21,277	0/0:27,0:27:81.25:0,81,1087	1/1:1,22:23:27.39:900,27,0	1/1:1,28:29:75.24:1069,75,0	1/1:0,30:30:84.28:1199,84,0
chr10	100500600	.	GGT	G	302.49	PASS	AB=0.917;AC=17;AF=0.354;AN=48;BaseQRankSum=7.498;DP=417;FS=1.710;HRun=0;HaplotypeScore=69.7456;InbreedingCoeff=0.5064;MQ=59.44;MQ0=12;MQRankSum=-5.708;QD=1.76;ReadPosRankSum=2.789;VQSLOD=1.5662;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:19:15.04:0,15,204	0/0:4,0:5:6.01:0,6,66	./.	./.	0/0:14,0:14:9.03:0,9,121	1/1:20,0:20:10.70:49,11,0	0/1:14,0:14:8.11:8,0,16	0/0:27,0:27:2.60:0,3,10	1/1:11,0:10:8.52:42,9,0	0/0:16,0:16:8.95:0,9,71	0/0:14,0:14:0.91:0,1,164	0/0:16,0:16:15.05:0,15,223	0/0:8,0:8:2.97:0,3,20	0/0:12,0:12:12.02:0,12,158	0/0:9,0:16:9:0,9,79	1/1:11,0:11:11.36:56,11,0	0/1:20,4:24:41.04:41,0,213	0/1:14,2:16:11.49:11,0,199	./.	1/1:31,0:31:17.04:84,17,0	./.	0/0:8,0:8:3.01:0,3,45	0/0:10,0:10:12.04:0,12,176	0/0:15,0:13:17.99:0,18,220	0/0:15,1:17:9.92:0,10,278	1/1:14,0:14:11.36:56,11,0	1/1:21,0:22:19.72:95,20,0	1/1:8,0:7:5.68:28,6,0
chr10	100500636	.	TGTGTGTGTGC	T	2803.97	PASS	AB=0.961;AC=15;AF=0.268;AN=56;BaseQRankSum=5.978;DP=406;FS=7.761;HRun=0;HaplotypeScore=123.9273;InbreedingCoeff=0.4037;MQ=55.79;MQ0=27;MQRankSum=-3.843;QD=17.20;ReadPosRankSum=-1.803;VQSLOD=1.4388;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:44.19:0,44,1210	0/0:6,0:5:12.04:0,12,498	0/0:17,0:6:14.57:0,15,135	0/0:22,0:10:16.52:0,17,176	0/0:6,0:6:18.04:0,18,647	1/1:18,0:17:30.08:311,30,0	1/1:10,0:9:17.59:151,18,0	0/1:21,0:21:54.68:331,0,55	1/1:9,0:8:18.02:199,18,0	0/0:12,0:11:30.03:0,30,773	0/0:14,0:14:41.83:0,42,1036	0/0:12,0:12:35.90:0,36,1251	0/0:6,0:6:17.92:0,18,327	0/0:9,0:9:24:0,24,647	0/0:11,0:11:18.05:0,18,615	0/1:11,1:12:4.98:257,0,5	0/0:25,0:25:62.75:0,63,1665	0/0:17,0:16:41.22:0,41,1265	0/1:7,0:5:28.82:64,0,29	0/1:25,2:25:13.10:467,0,13	0/1:16,0:15:1.89:156,0,2	0/0:6,0:6:12.01:0,12,278	0/0:10,0:8:24.04:0,24,830	0/0:16,0:14:36.08:0,36,1256	0/0:21,0:21:57.10:0,57,1921	0/1:18,0:18:32.57:392,0,33	0/1:17,3:17:16.32:510,0,16	1/1:4,1:4:6.49:144,6,0
chr10	100500638	.	TGTGTGTGC	T	4966.49	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=4.137;DP=408;FS=6.419;HRun=0;HaplotypeScore=106.9665;InbreedingCoeff=0.9665;MQ=56.06;MQ0=26;MQRankSum=-3.080;QD=29.92;ReadPosRankSum=-3.031;VQSLOD=3.5164;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:47.16:0,47,1030	0/0:6,0:5:12.04:0,12,394	0/0:17,0:6:13.69:0,14,101	0/0:20,0:8:12.76:0,13,99	0/0:7,0:7:21.01:0,21,546	1/1:12,5:16:32.98:560,33,0	1/1:8,1:8:18:240,18,0	1/1:26,0:26:42.79:582,43,0	1/1:6,3:8:18.02:334,18,0	0/0:12,0:11:33.03:0,33,680	0/0:15,0:15:37.06:0,37,832	0/0:11,0:11:32.91:0,33,1022	0/0:7,0:7:20.92:0,21,303	0/0:9,0:9:23.98:0,24,566	0/0:12,0:12:21.04:0,21,509	1/1:8,5:13:30:550,30,0	0/0:25,0:25:62.67:0,63,1348	0/0:16,0:16:41.93:0,42,1034	1/1:7,0:5:11.98:102,12,0	1/1:18,7:23:51.92:814,52,0	1/1:16,1:16:28.78:325,29,0	0/0:6,0:6:12.01:0,12,227	0/0:10,0:8:24.02:0,24,674	0/0:14,0:12:33.55:0,34,1020	0/0:21,0:21:51.05:0,51,1478	1/1:14,4:18:47.86:643,48,0	1/1:16,4:17:39.04:640,39,0	1/1:4,1:4:9.01:177,9,0
chr10	100500642	.	TGTGC	T	3513.66	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=5.497;DP=400;FS=0.920;HRun=0;HaplotypeScore=86.5581;InbreedingCoeff=0.9594;MQ=59.81;MQ0=20;MQRankSum=-3.683;QD=21.69;ReadPosRankSum=-2.130;VQSLOD=2.5655;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:50.50:0,50,664	0/0:5,0:5:11.95:0,12,186	0/0:16,0:7:18.66:0,19,127	0/0:20,0:10:14.58:0,15,112	0/0:8,0:8:23.97:0,24,362	1/1:12,3:14:26.96:279,27,0	1/1:9,0:8:17.21:147,17,0	1/1:27,0:27:70.47:660,70,0	1/1:9,0:8:18.02:194,18,0	0/0:13,0:12:34.11:0,34,413	0/0:13,0:13:23.30:0,23,506	0/0:11,0:11:32.87:0,33,598	0/0:7,0:7:20.91:0,21,214	0/0:10,0:10:26.98:0,27,389	0/0:12,0:12:20.99:0,21,290	1/1:13,0:13:26.96:275,27,0	0/0:25,0:25:62.46:0,62,734	0/0:16,0:16:39.85:0,40,565	1/1:7,2:7:20.98:182,21,0	1/1:19,2:19:50.86:490,51,0	1/1:15,2:16:26.95:233,27,0	0/0:5,0:5:9:0,9,132	0/0:9,0:7:17.98:0,18,360	0/0:14,0:13:30.06:0,30,583	0/0:19,0:19:8.59:0,9,783	1/1:12,6:18:53.86:505,54,0	1/1:17,2:16:39.05:446,39,0	1/1:5,0:4:9.01:103,9,0
chr10	100500644	.	TGC	T	2862.18	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=5.817;DP=397;FS=0.916;HRun=0;HaplotypeScore=75.2841;InbreedingCoeff=0.9682;MQ=61.10;MQ0=19;MQRankSum=-3.784;QD=17.78;ReadPosRankSum=-2.074;VQSLOD=3.1007;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:49.97:0,50,495	0/0:5,0:5:11.95:0,12,134	0/0:16,0:7:17.45:0,17,124	0/0:21,0:11:16.51:0,17,126	0/0:9,0:9:26.97:0,27,297	1/1:15,0:14:26.88:212,27,0	1/1:7,0:7:14.98:126,15,0	1/1:19,9:28:80.82:697,81,0	1/1:9,0:8:17.99:152,18,0	0/0:13,0:12:28.91:0,29,233	0/0:13,0:13:34.80:0,35,380	0/0:11,0:11:32.75:0,33,388	0/0:7,0:7:20.89:0,21,162	0/0:9,0:9:23.99:0,24,267	0/0:11,0:11:20.99:0,21,211	1/1:13,0:13:29.91:241,30,0	0/0:24,0:24:37.55:0,38,460	0/0:16,0:16:27.96:0,28,321	1/1:10,0:8:20.98:182,21,0	1/1:21,0:19:50.79:406,51,0	1/1:16,0:15:26.94:219,27,0	0/0:5,0:5:9:0,9,105	0/0:8,0:6:17.96:0,18,233	0/0:14,0:13:33.02:0,33,423	0/0:19,0:19:43.15:0,43,538	1/1:18,0:18:53.81:449,54,0	1/1:19,0:16:38.96:325,39,0	1/1:5,0:4:8.99:75,9,0
chr10	100500700	.	A	AAT	8284.62	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-8.999;DP=497;FS=2.665;HRun=0;HaplotypeScore=64.2515;InbreedingCoeff=0.9904;MQ=67.78;MQ0=0;MQRankSum=0.207;QD=38.53;ReadPosRankSum=-0.463;VQSLOD=6.4999;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:81.17:0,81,1011	0/0:7,0:7:15.05:0,15,197	0/0:15,0:15:33.14:0,33,368	0/0:7,0:6:11.38:0,11,107	0/0:22,0:22:66.21:0,66,864	1/1:3,17:20:45.15:772,45,0	1/1:2,10:12:21.07:360,21,0	1/1:11,36:47:99:1808,108,0	1/1:1,15:16:39.13:669,39,0	0/0:22,0:22:66.21:0,66,853	0/0:19,0:19:51.13:0,51,639	0/0:22,0:22:63.20:0,63,826	0/0:15,0:15:39.13:0,39,512	0/0:18,0:18:54.18:0,54,709	0/0:23,0:23:69.22:0,69,905	1/1:2,9:11:21.07:344,21,0	0/0:19,0:19:45.10:0,45,571	0/0:12,0:12:33.09:0,33,419	1/1:4,10:14:33.11:557,33,0	1/1:2,15:18:39.13:669,39,0	1/1:1,17:18:33.11:550,33,0	0/0:9,0:9:21.07:0,21,276	0/0:8,0:8:24.08:0,24,315	0/0:15,0:15:36:0,36,472	0/0:19,0:19:54.15:0,54,693	1/1:2,24:26:69.24:1168,69,0	1/1:0,18:19:42.14:719,42,0	1/1:0,14:14:39.13:669,39,0
chr10	100501464	.	T	TC	12260.53	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=7.757;DP=679;FS=0.000;HRun=0;HaplotypeScore=73.6460;InbreedingCoeff=0.9982;MQ=84.36;MQ0=0;MQRankSum=-2.031;QD=43.63;ReadPosRankSum=1.976;VQSLOD=5.2739;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.24:0,78,1069	0/0:11,0:11:33.10:0,33,444	0/0:19,0:19:54.17:0,54,736	0/0:21,0:21:56.53:0,57,763	0/0:21,0:21:63.18:0,63,846	1/1:1,38:39:99:1775,111,0	1/1:0,18:18:48.16:768,48,0	1/1:0,32:32:96.30:1487,96,0	1/1:1,8:9:21.07:336,21,0	0/0:39,0:38:99:0,114,1558	0/0:22,0:22:66.20:0,66,905	0/0:25,0:25:72.24:0,72,1006	0/0:30,0:30:90.30:0,90,1255	0/0:27,0:27:78.26:0,78,1091	0/0:21,1:22:18.25:0,18,832	1/1:1,27:28:78.27:1247,78,0	0/0:19,0:19:57.13:0,57,756	0/0:14,0:14:40.95:0,41,546	1/1:1,21:22:63.20:984,63,0	1/1:0,23:23:63.21:1007,63,0	1/1:1,26:27:69.24:1103,69,0	0/0:30,0:30:87.25:0,87,1165	0/0:25,0:25:75.24:0,75,1029	0/0:10,0:10:30.10:0,30,417	0/0:36,0:36:99:0,108,1510	1/1:1,33:34:60.81:1542,61,0	1/1:0,34:34:90.31:1437,90,0	1/1:3,12:15:36.12:576,36,0
chr10	100502637	.	GCA	G	1153.28	PASS	AB=0.974;AC=36;AF=0.720;AN=50;BaseQRankSum=3.545;DP=575;FS=0.636;HRun=0;HaplotypeScore=111.8179;InbreedingCoeff=-0.0106;MQ=67.69;MQ0=14;MQRankSum=-0.669;QD=2.39;ReadPosRankSum=-0.255;VQSLOD=2.0510;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,2:36:14.94:139,15,0	0/1:6,0:6:14.67:15,0,38	./.	./.	0/0:16,0:15:8.86:0,9,98	1/1:11,5:16:5.69:65,6,0	1/1:16,5:22:8.86:79,9,0	0/1:23,0:22:0.55:5,0,1	0/1:17,0:17:33.07:33,0,151	0/0:16,0:16:14.88:0,15,135	0/1:16,0:16:11.57:12,0,171	1/1:18,0:26:16.57:76,17,0	0/1:13,0:15:37.19:37,0,134	1/1:11,0:20:2.80:13,3,0	0/1:26,0:24:15.62:16,0,247	1/1:14,0:15:17.51:133,18,0	0/1:27,1:28:71.66:72,0,396	0/1:20,2:27:59.62:60,0,424	1/1:16,2:19:11.81:98,12,0	1/1:8,6:14:8.82:67,9,0	0/1:39,0:36:19.29:175,0,19	1/1:7,0:19:2.73:14,3,0	./.	1/1:15,0:23:2.96:11,3,0	0/1:20,0:21:1.47:1,0,97	1/1:13,9:23:17.09:108,17,0	1/1:13,2:14:3:27,3,0	1/1:8,1:9:5.81:46,6,0
chr10	100503570	.	TTA	T	15407.16	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=17.016;DP=647;FS=3.858;HRun=0;HaplotypeScore=90.4810;InbreedingCoeff=0.9991;MQ=76.74;MQ0=1;MQRankSum=-2.354;QD=40.33;ReadPosRankSum=0.804;VQSLOD=6.5329;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:40:99:1679,114,0	0/0:11,0:11:33.11:0,33,606	0/0:15,0:15:36.12:0,36,658	0/0:16,0:16:38.17:0,38,797	0/0:27,0:27:78.27:0,78,1459	1/1:0,20:20:54.18:795,54,0	1/1:0,16:16:48.16:707,48,0	1/1:0,39:39:99:1619,114,0	1/1:0,17:17:48.16:706,48,0	0/0:37,0:37:99:0,111,1993	0/0:16,0:16:48.16:0,48,888	1/1:0,27:27:72.24:1060,72,0	0/0:25,0:25:69.24:0,69,1292	1/1:1,14:15:36.12:530,36,0	0/0:21,0:21:60.21:0,60,1112	1/1:0,23:23:63.16:903,63,0	0/0:36,0:36:99:0,99,1806	0/0:39,0:39:99:0,114,2130	1/1:2,22:24:66.20:951,66,0	1/1:0,15:15:45.11:638,45,0	1/1:0,7:7:21.07:309,21,0	1/1:1,24:25:69.23:1016,69,0	1/1:1,22:23:56.57:839,57,0	1/1:1,26:27:72.24:1060,72,0	0/0:22,0:22:66.23:0,66,1226	1/1:1,27:28:25.06:1092,25,0	1/1:0,23:22:66.22:972,66,0	1/1:0,13:13:36.12:530,36,0
chr10	100503693	.	G	GA	11888.06	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-14.355;DP=603;FS=1.038;HRun=7;HaplotypeScore=52.8919;InbreedingCoeff=0.9996;MQ=86.41;MQ0=0;MQRankSum=-3.731;QD=31.62;ReadPosRankSum=-0.185;VQSLOD=4.6365;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:66.18:784,66,0	0/0:14,0:14:36.06:0,36,348	0/0:20,0:21:26.17:0,26,385	0/0:19,0:19:33.33:0,33,340	0/0:18,0:17:51.07:0,51,486	1/1:4,21:25:34.25:696,34,0	1/1:0,16:16:39.12:471,39,0	1/1:3,31:34:93.25:1098,93,0	1/1:0,22:22:66.20:797,66,0	0/0:17,0:17:42.06:0,42,406	0/0:22,0:22:57.09:0,57,550	1/1:3,21:24:60.18:725,60,0	0/0:23,0:23:63.07:0,63,597	1/1:1,28:29:81.25:979,81,0	0/0:26,0:26:75.12:0,75,724	1/1:4,15:19:42.13:507,42,0	0/0:17,0:17:48.08:0,48,464	0/0:26,0:26:69.01:0,69,643	1/1:1,17:18:51.12:591,51,0	1/1:0,28:27:81.21:962,81,0	1/1:2,12:14:36.11:435,36,0	1/1:4,15:21:51.01:582,51,0	1/1:3,15:18:45.14:544,45,0	1/1:1,20:21:54.17:652,54,0	0/0:24,0:24:57.08:0,57,551	1/1:5,25:30:75.23:906,75,0	1/1:1,24:25:66.20:797,66,0	1/1:0,10:10:30.09:362,30,0
chr10	100504002	.	A	ATC	16128.47	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-16.986;DP=646;FS=4.757;HRun=0;HaplotypeScore=65.8019;InbreedingCoeff=0.9993;MQ=92.85;MQ0=2;MQRankSum=-2.727;QD=40.94;ReadPosRankSum=2.776;VQSLOD=6.7780;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:38:99:1741,102,0	0/0:11,0:11:27.09:0,27,358	0/0:28,0:28:72.23:0,72,947	0/0:26,0:26:56.44:0,56,674	0/0:22,0:22:57.19:0,57,758	1/1:0,19:19:54.18:935,54,0	1/1:1,25:27:69.24:1193,69,0	1/1:10,34:43:99:1665,99,0	1/1:2,16:18:39.13:675,39,0	0/0:27,0:27:81.27:0,81,1078	0/0:19,0:19:51.17:0,51,678	1/1:3,14:17:27.09:468,27,0	0/0:26,0:26:63.19:0,63,820	1/1:2,24:26:63.22:1087,63,0	0/0:26,0:26:75.23:0,75,983	1/1:5,14:19:33.11:572,33,0	0/0:23,0:23:63.21:0,63,839	0/0:22,0:22:60.16:0,60,780	1/1:5,21:27:66.19:1078,66,0	1/1:2,17:20:48.16:831,48,0	1/1:4,32:36:81.28:1401,81,0	1/1:0,11:13:36.12:619,36,0	1/1:1,12:12:29.89:519,30,0	1/1:3,21:24:63.21:1070,63,0	0/0:22,0:22:57.19:0,57,757	1/1:2,18:20:54.18:936,54,0	1/1:4,20:23:54.18:924,54,0	1/1:0,8:8:24.08:416,24,0
chr10	100504254	.	C	CTT	20016.96	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-16.051;DP=630;FS=3.989;HRun=1;HaplotypeScore=62.3755;InbreedingCoeff=0.9951;MQ=90.23;MQ0=0;MQRankSum=-4.266;QD=51.99;ReadPosRankSum=1.558;VQSLOD=4.7958;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:51.17:985,51,0	0/0:8,0:8:24.08:0,24,368	0/0:27,0:27:81.27:0,81,1220	0/0:21,0:21:60.12:0,60,886	0/0:34,0:34:93.32:0,93,1422	1/1:0,46:46:99:2434,126,0	1/1:0,12:12:33.11:638,33,0	1/1:3,32:35:99:1864,99,0	1/1:0,24:24:69.24:1333,69,0	0/0:28,0:28:84.28:0,84,1268	0/0:29,0:29:84.28:0,84,1286	1/1:0,23:23:63.22:1217,63,0	0/0:16,0:16:48.16:0,48,733	1/1:0,22:22:60.21:1159,60,0	0/0:32,0:32:96.31:0,96,1448	1/1:1,14:16:45.12:833,45,0	0/0:11,0:11:33.11:0,33,505	0/0:19,0:19:57.17:0,57,843	1/1:4,7:11:30.10:556,30,0	1/1:2,26:28:75.26:1394,75,0	1/1:0,25:25:69.24:1333,69,0	1/1:0,22:22:66.23:1275,66,0	1/1:1,23:24:66.23:1275,66,0	1/1:0,7:7:12.04:232,12,0	0/0:20,0:20:57.19:0,57,873	1/1:1,21:23:66.21:1242,66,0	1/1:7,28:35:87.23:1607,87,0	1/1:0,13:13:33.11:638,33,0
chr10	100505249	.	TA	T	15440.43	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=15.492;DP=681;FS=8.780;HRun=2;HaplotypeScore=101.0334;InbreedingCoeff=0.9997;MQ=79.61;MQ0=0;MQRankSum=-2.851;QD=34.70;ReadPosRankSum=4.487;VQSLOD=4.5468;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:99:1324,102,0	0/0:14,0:14:42.14:0,42,630	0/0:19,0:19:52.03:0,52,672	0/0:13,0:13:32.91:0,33,389	0/0:17,0:17:51.17:0,51,748	1/1:0,19:19:51.17:662,51,0	1/1:0,24:24:57.19:740,57,0	1/1:0,25:25:75.21:945,75,0	1/1:1,18:19:51.17:662,51,0	0/0:22,0:22:60.20:0,60,899	0/0:14,0:14:42.13:0,42,593	1/1:0,37:37:99:1363,105,0	0/0:23,0:23:69.21:0,69,994	1/1:0,29:29:72.23:934,72,0	0/0:31,0:31:93.29:0,93,1355	1/1:0,29:29:81.26:1052,81,0	0/0:42,0:42:99:0,126,1848	0/0:18,0:18:51.15:0,51,738	1/1:0,15:15:45.15:582,45,0	1/1:1,19:20:54.17:696,54,0	1/1:1,55:56:99:1753,135,0	1/1:0,20:20:55.06:697,55,0	1/1:1,22:23:60.19:779,60,0	1/1:0,35:35:99:1286,99,0	0/0:23,0:22:69.23:0,69,1033	1/1:1,23:24:69.16:875,69,0	1/1:0,25:25:60.19:779,60,0	1/1:0,10:10:24.08:312,24,0
chr10	100507661	.	TA	T	4436.35	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.261;DP=728;FS=1.981;HRun=6;HaplotypeScore=69.5646;InbreedingCoeff=0.9967;MQ=85.04;MQ0=0;MQRankSum=-3.399;QD=28.44;ReadPosRankSum=2.419;VQSLOD=5.6672;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:84.21:902,84,0	0/0:15,0:15:39.13:0,39,513	0/0:23,0:23:51.15:0,51,625	0/0:22,0:22:53.10:0,53,584	0/0:25,0:25:72.23:0,72,937	0/0:26,0:25:78.25:0,78,1026	0/0:23,0:23:60.20:0,60,789	0/0:28,0:28:78.24:0,78,1002	0/0:30,0:30:84.25:0,84,1078	0/0:26,0:26:75.24:0,75,973	0/0:21,0:21:63.14:0,63,807	1/1:1,33:34:87.22:935,87,0	0/0:35,0:35:99:0,102,1327	1/1:1,29:30:81.16:858,81,0	0/0:46,0:46:99:0,126,1644	0/0:19,0:19:51.17:0,51,671	0/0:33,0:33:93.22:0,93,1158	0/0:24,0:24:69.22:0,69,908	0/0:32,0:32:87.28:0,87,1144	0/0:26,0:26:72.23:0,72,935	0/0:30,0:30:81.26:0,81,1066	1/1:1,16:16:42.10:451,42,0	1/1:1,24:25:66.16:709,66,0	1/1:0,21:21:54.14:580,54,0	0/0:30,0:30:84.26:0,84,1080	0/0:28,0:28:72.23:0,72,948	0/0:25,0:25:66.21:0,66,868	0/0:5,0:5:14.99:0,15,162
chr10	100507879	.	T	TAGCCTCCC	4454.67	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-4.777;DP=565;FS=0.000;HRun=0;HaplotypeScore=141.3483;InbreedingCoeff=0.8989;MQ=73.56;MQ0=0;MQRankSum=-9.478;QD=36.22;ReadPosRankSum=-0.166;VQSLOD=4.5008;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,13:33:21.07:839,21,0	0/0:13,0:13:27.07:0,27,681	0/0:26,0:26:35.94:0,36,669	0/0:20,0:20:1.07:0,1,308	0/0:25,0:25:27.08:0,27,628	0/0:24,0:24:48.12:0,48,1078	0/0:26,0:26:51.12:0,51,1025	0/0:25,0:25:18.06:0,18,388	0/0:17,0:17:36.12:0,36,887	0/0:13,0:13:18.06:0,18,380	0/0:13,0:13:33.07:0,33,708	1/1:10,11:22:27.09:1118,27,0	0/0:20,0:20:45.15:0,45,1111	1/1:8,11:21:27.09:1117,27,0	0/0:18,0:18:27.08:0,27,638	0/0:21,0:21:51.15:0,51,1176	0/0:32,0:32:68.36:0,68,1704	0/0:26,0:26:45.09:0,45,1002	0/0:18,0:18:21.05:0,21,449	0/0:14,0:14:22.32:0,22,610	0/0:24,0:24:54.15:0,54,1273	1/1:6,8:15:5.95:248,6,0	1/1:5,2:10:5.53:141,6,0	1/1:3,14:20:24.08:991,24,0	0/0:16,0:16:30.10:0,30,763	0/0:21,0:21:45.12:0,45,925	0/0:19,0:18:42.14:0,42,1060	0/0:11,0:11:15.03:0,15,330
chr10	100509177	.	TGAAA	T	6305.13	PASS	AB=0.574;AC=21;AF=0.404;AN=52;BaseQRankSum=5.686;DP=593;FS=5.673;HRun=0;HaplotypeScore=151.7143;InbreedingCoeff=0.9039;MQ=54.33;MQ0=6;MQRankSum=0.437;QD=26.94;ReadPosRankSum=-1.203;VQSLOD=4.1583;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:63.17:0,63,561	0/0:12,0:12:15.05:0,15,343	./.	./.	0/0:28,0:28:72.22:0,72,1605	1/1:5,17:22:36.12:589,36,0	1/1:5,3:8:18.02:250,18,0	1/1:21,15:34:45:566,45,0	1/1:6,9:15:12.04:195,12,0	0/0:27,0:27:60.21:0,60,1443	0/0:19,0:19:36.11:0,36,772	0/0:15,0:15:29.51:0,30,389	0/0:17,0:17:45.15:0,45,1036	0/0:24,0:24:30.96:0,31,375	0/0:22,0:22:57.18:0,57,1299	1/1:5,14:19:30.10:489,30,0	0/0:24,0:24:53.67:0,54,1217	0/0:13,0:13:33.11:0,33,781	1/1:4,9:12:27.05:389,27,0	1/1:5,30:35:84.28:1331,84,0	1/1:4,7:11:12.04:196,12,0	0/0:23,0:23:38:0,38,380	0/0:30,0:29:52.51:0,53,510	0/0:11,0:11:14.94:0,15,124	0/0:31,0:31:75.25:0,75,1760	0/1:7,20:27:79.60:855,0,80	1/1:8,17:25:32.86:540,33,0	1/1:5,18:23:57.18:905,57,0
chr10	100509183	.	A	AAAGG	3176.40	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.650;DP=583;FS=1.280;HRun=0;HaplotypeScore=162.5904;InbreedingCoeff=0.9330;MQ=53.74;MQ0=8;MQRankSum=-9.187;QD=22.21;ReadPosRankSum=1.252;VQSLOD=3.3979;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:38,3:41:33.34:878,33,0	0/0:12,0:12:30.05:0,30,410	0/0:13,0:6:17.78:0,18,150	0/0:11,0:3:8.98:0,9,78	0/0:26,0:26:78.23:0,78,1366	0/0:21,0:21:45.09:0,45,465	0/0:9,0:9:21.84:0,22,189	0/0:34,0:31:75.60:0,76,610	0/0:12,0:12:21.02:0,21,203	0/0:26,0:26:75.23:0,75,1277	0/0:18,0:18:48.12:0,48,753	1/1:14,5:19:12.42:494,12,0	0/0:19,0:19:57.14:0,57,904	1/1:20,4:24:10.88:452,11,0	0/0:21,0:21:63.18:0,63,1093	0/0:20,0:20:42.03:0,42,411	0/0:23,0:22:62.62:0,63,1049	0/0:14,0:14:39.09:0,39,672	0/0:14,0:12:32.88:0,33,312	0/0:32,0:32:93.02:0,93,910	0/0:10,0:10:2.58:0,3,167	1/1:18,4:22:21.61:578,22,0	1/1:21,6:26:44.13:740,44,0	1/1:8,2:10:21.30:216,21,0	0/0:33,0:33:92.23:0,92,1545	0/0:27,0:27:77.27:0,77,793	0/0:24,0:24:41.97:0,42,433	0/0:21,0:21:60.12:0,60,627
chr10	100509207	.	A	AAAGG	3762.86	PASS	AB=0.927;AC=11;AF=0.196;AN=56;BaseQRankSum=8.239;DP=607;FS=4.714;HRun=0;HaplotypeScore=167.5886;InbreedingCoeff=0.8821;MQ=57.64;MQ0=4;MQRankSum=-7.292;QD=27.27;ReadPosRankSum=1.242;VQSLOD=3.5092;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:35,2:38:33.84:770,0,34	0/0:6,0:6:18.06:0,18,363	0/0:17,0:12:36.04:0,36,661	0/0:18,0:12:35.13:0,35,566	0/0:25,0:25:75.16:0,75,1374	0/0:21,0:21:51.14:0,51,923	0/0:14,0:14:38.06:0,38,771	0/0:32,0:31:86.67:0,87,1476	0/0:12,0:12:24.08:0,24,480	0/0:26,0:26:75.25:0,75,1490	0/0:16,0:16:48.16:0,48,997	1/1:12,5:17:47.13:585,47,0	0/0:25,0:25:69.21:0,69,1323	1/1:23,4:27:63.84:793,64,0	0/0:24,0:24:72.22:0,72,1407	0/0:19,0:19:47.82:0,48,853	0/0:28,0:27:61.81:0,62,1505	0/0:18,0:18:51.17:0,51,1060	0/0:11,0:9:27.05:0,27,493	0/0:29,0:29:87.07:0,87,1618	0/0:14,0:14:36.11:0,36,666	1/1:15,5:20:29.59:594,30,0	1/1:21,5:25:32.70:816,33,0	1/1:8,2:10:17.16:205,17,0	0/0:34,0:34:95.29:0,95,1914	0/0:25,0:25:72.18:0,72,1287	0/0:23,0:23:51.07:0,51,1002	0/0:32,0:32:96.33:0,96,1965
chr10	100509807	.	TA	T	3690.67	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=3.045;DP=363;FS=3.810;HRun=8;HaplotypeScore=45.9416;InbreedingCoeff=0.8158;MQ=69.63;MQ0=0;MQRankSum=0.317;QD=21.97;ReadPosRankSum=-3.604;VQSLOD=2.3700;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:30:63.22:0,63,321	0/0:9,0:9:27.08:0,27,323	0/1:8,0:5:12.74:13,0,30	0/1:13,0:10:2.10:2,0,132	0/0:14,0:14:42.13:0,42,507	1/1:0,15:15:42.07:406,42,0	1/1:0,3:3:9.01:87,9,0	1/1:6,23:29:69.09:661,69,0	1/1:1,12:13:36.06:348,36,0	0/0:15,0:15:42.13:0,42,507	0/0:20,0:20:51.14:0,51,605	0/0:1,0:14:34.29:0,34,176	0/0:9,0:9:21.06:0,21,254	0/0:1,0:5:8.63:0,9,44	0/0:4,0:4:12.02:0,12,133	1/1:2,5:7:15.02:145,15,0	0/0:16,0:16:48.15:0,48,580	0/0:20,0:20:55.41:0,55,655	1/1:0,12:12:36.05:343,36,0	1/1:2,13:15:36.05:347,36,0	1/1:0,6:6:18.03:174,18,0	0/0:2,0:2:2.74:0,3,12	0/0:1,0:13:34.34:0,34,173	0/0:0,0:4:11.50:0,12,58	0/0:20,0:20:54.15:0,54,639	1/1:1,13:14:5.78:326,6,0	1/1:1,17:18:48.08:463,48,0	1/1:0,15:15:39.06:377,39,0
chr10	100512628	.	G	GGC	65.70	PASS	AB=0.990;AC=10;AF=0.179;AN=56;BaseQRankSum=6.463;DP=547;FS=0.855;HRun=0;HaplotypeScore=156.5774;InbreedingCoeff=0.1885;MQ=37.11;MQ0=26;MQRankSum=-2.890;QD=0.63;ReadPosRankSum=-2.115;VQSLOD=2.3127;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,1:20:39.02:39,0,86	0/0:9,0:9:21.07:0,21,323	0/0:17,0:2:5.61:0,6,49	0/0:35,0:6:6.91:0,7,98	0/0:28,0:27:42.13:0,42,611	0/0:21,0:19:6.12:0,6,77	0/1:16,0:15:9.99:10,0,40	0/0:24,0:24:60.66:0,61,751	0/0:20,2:19:5.05:0,5,55	0/0:28,0:28:80.86:0,81,1160	0/0:30,0:29:57.05:0,57,813	1/1:10,1:11:0.80:36,1,0	0/0:22,0:21:51.01:0,51,694	0/0:18,2:20:5.31:0,5,41	0/0:13,0:13:23.41:0,23,355	0/1:17,0:14:27.79:28,0,105	0/0:23,0:22:46.55:0,47,600	0/0:18,0:17:48.14:0,48,650	0/0:14,0:12:27.66:0,28,355	0/1:11,0:10:10.42:10,0,25	1/1:15,0:14:5.95:65,6,0	0/0:18,3:21:12.11:0,12,76	0/0:16,0:16:4.21:0,4,23	1/1:10,1:11:0.16:0,0,0	0/0:26,0:24:49.72:0,50,765	0/0:26,0:20:9.64:0,10,403	0/0:24,0:23:12.89:0,13,294	0/0:5,0:3:2.15:0,2,37
chr10	100512644	.	GGC	G	472.67	PASS	AB=0.937;AC=16;AF=0.296;AN=54;BaseQRankSum=5.941;DP=520;FS=27.537;HRun=0;HaplotypeScore=125.4841;InbreedingCoeff=0.1053;MQ=44.26;MQ0=31;MQRankSum=-4.123;QD=2.54;ReadPosRankSum=-2.782;VQSLOD=0.4360;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,1:11:4.52:0,5,60	0/1:7,3:10:41:41,0,266	0/0:28,0:4:8.82:0,9,112	0/0:59,0:18:13.77:0,14,249	0/0:18,0:17:26.97:0,27,382	0/0:20,1:19:2.60:0,3,17	0/0:12,0:10:2.37:0,2,8	0/0:31,0:31:68.57:0,69,553	1/1:12,1:10:4.90:74,5,0	0/1:22,1:23:31.42:31,0,798	0/0:23,0:23:54.16:0,54,802	0/1:13,0:13:2.07:11,0,2	0/1:16,1:16:28.56:29,0,378	0/0:19,0:19:4.29:0,4,12	0/0:15,1:16:36.19:0,36,520	1/1:14,0:11:2.37:48,2,0	0/0:18,1:18:19.18:0,19,420	0/0:15,1:15:28.62:0,29,500	0/1:13,0:11:49.36:49,0,172	1/1:10,0:9:1:3,1,0	./.	0/0:18,1:19:0.42:0,0,11	1/1:19,0:19:0.75:2,1,0	0/1:9,1:10:0:1,0,0	0/0:19,0:17:36.11:0,36,549	0/1:20,1:15:36.07:204,0,36	0/1:22,1:22:20.15:115,0,20	0/0:6,0:4:5.21:0,5,30
chr10	100512645	.	GCA	G	35.21	PASS	AB=0.963;AC=9;AF=0.173;AN=52;BaseQRankSum=6.418;DP=512;FS=10.701;HRun=0;HaplotypeScore=125.5769;InbreedingCoeff=0.1346;MQ=44.41;MQ0=31;MQRankSum=-3.425;QD=0.31;ReadPosRankSum=-1.694;VQSLOD=1.4534;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:9:5.95:0,6,79	0/1:10,0:10:6.40:6,0,353	0/0:29,0:4:8.24:0,8,129	0/0:58,0:18:15.10:0,15,308	0/0:15,0:14:27.09:0,27,511	0/0:20,0:19:2.37:0,2,40	0/1:10,1:9:0:0,0,0	0/0:31,0:31:76.08:0,76,766	1/1:13,0:10:5.91:39,6,0	0/0:21,0:21:39.44:0,39,918	0/0:23,0:23:54.17:0,54,1022	0/0:13,0:13:8.12:0,8,35	0/0:16,0:16:30.33:0,30,539	0/0:19,0:19:10.48:0,10,45	0/0:16,0:16:33.84:0,34,626	0/1:13,1:11:6.88:7,0,11	0/0:19,0:18:14.84:0,15,557	0/0:16,0:15:33.46:0,33,641	0/1:13,0:11:15.85:16,0,221	0/1:10,0:9:0.05:0,0,0	./.	0/0:19,0:19:6.60:0,7,23	0/0:19,0:19:2.16:0,2,9	./.	0/0:19,0:17:38.74:0,39,765	0/1:20,0:14:63.52:64,0,105	0/1:21,3:23:20.17:20,0,71	0/0:6,0:4:5.05:0,5,49
chr10	100512650	.	GAGAC	G	2717.54	PASS	AB=0.591;AC=26;AF=0.500;AN=52;BaseQRankSum=7.588;DP=535;FS=8.114;HRun=0;HaplotypeScore=127.7453;InbreedingCoeff=0.7063;MQ=44.11;MQ0=34;MQRankSum=-8.425;QD=10.57;ReadPosRankSum=-4.465;VQSLOD=0.7601;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:8,2:7:2.99:0,3,52	0/0:10,0:10:8.12:0,8,445	0/0:31,0:4:8.86:0,9,145	0/0:61,0:19:11.55:0,12,370	0/0:13,0:12:27.09:0,27,669	0/1:8,12:19:10.65:46,0,11	0/1:3,10:11:0:0,0,0	1/1:14,24:35:65.92:889,66,0	1/1:5,8:10:2.94:18,3,0	0/0:21,0:21:48.04:0,48,983	0/0:24,0:24:51.18:0,51,1253	1/1:3,11:14:9.50:157,10,0	0/0:18,0:17:32.53:0,33,765	1/1:3,19:22:12.25:207,12,0	0/0:16,0:16:26.97:0,27,685	1/1:3,12:12:8.53:155,9,0	0/0:19,0:18:27.56:0,28,657	0/0:17,0:16:36.12:0,36,838	1/1:4,11:13:29.94:366,30,0	./.	1/1:3,11:13:2.92:17,3,0	1/1:8,12:20:5.89:104,6,0	1/1:2,18:20:3.35:53,3,0	./.	0/0:20,0:18:41.82:0,42,1013	1/1:9,13:16:10.10:462,10,0	1/1:9,15:23:24.03:380,24,0	1/1:2,4:4:3.01:51,3,0
chr10	100512652	.	GAC	G	514.15	PASS	AB=0.963;AC=23;AF=0.411;AN=56;BaseQRankSum=9.039;DP=518;FS=7.902;HRun=0;HaplotypeScore=119.9554;InbreedingCoeff=0.3657;MQ=44.31;MQ0=33;MQRankSum=-7.454;QD=1.90;ReadPosRankSum=-2.894;VQSLOD=1.0561;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:5:5.74:0,6,71	0/0:9,0:9:9.86:0,10,337	0/0:31,0:4:3.31:0,3,111	0/0:62,0:19:20.74:0,21,327	0/0:12,0:11:27.09:0,27,519	1/1:23,0:21:2.64:12,3,0	0/1:11,1:10:0:0,0,0	0/1:37,0:34:99:170,0,179	1/1:13,0:10:5.92:40,6,0	0/0:19,0:19:53.17:0,53,870	0/0:22,0:22:51.17:0,51,973	1/1:14,0:14:9.12:39,9,0	0/0:18,0:17:36.91:0,37,612	1/1:22,0:22:11.18:48,11,0	0/0:14,0:14:29.96:0,30,552	1/1:13,1:11:10.88:48,11,0	0/0:19,0:18:12.12:0,12,533	0/0:16,0:15:39.05:0,39,676	0/1:15,0:13:67.16:98,0,67	0/1:8,1:8:0:0,0,0	1/1:14,0:13:0.47:1,0,0	0/1:18,0:18:12.62:16,0,13	1/1:20,0:20:2.74:13,3,0	0/1:9,0:9:0:0,0,0	0/0:17,0:15:42.13:0,42,776	0/1:20,1:16:73.91:107,0,74	0/1:21,3:23:0.06:74,0,0	0/1:6,0:4:8.66:9,0,17
chr10	100512656	.	GAC	G	143.41	PASS	AB=0.982;AC=18;AF=0.321;AN=56;BaseQRankSum=8.921;DP=509;FS=1.276;HRun=0;HaplotypeScore=114.1279;InbreedingCoeff=0.2331;MQ=44.93;MQ0=32;MQRankSum=-8.036;QD=0.60;ReadPosRankSum=0.925;VQSLOD=2.3205;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:5:2.94:0,3,37	0/0:8,0:8:9.97:0,10,339	0/0:31,0:4:9.03:0,9,139	0/0:64,0:19:9.09:0,9,353	0/0:11,0:10:27.09:0,27,521	0/1:22,0:21:1.07:1,0,74	0/1:12,0:10:0:0,0,0	0/1:34,0:31:48.52:49,0,261	1/1:11,0:8:3.81:19,4,0	0/0:17,0:17:50.99:0,51,874	0/0:22,0:22:51.17:0,51,979	1/1:14,0:14:7.49:28,7,0	0/0:19,0:18:45.92:0,46,681	1/1:20,1:21:10.05:36,10,0	0/0:14,0:14:29.98:0,30,552	0/1:16,0:13:8.15:15,0,8	0/0:17,0:16:13.13:0,13,520	0/0:14,0:13:39.13:0,39,723	0/1:16,0:14:12.88:13,0,124	0/0:11,1:11:8.86:0,9,98	0/0:15,0:14:2.62:0,3,42	0/1:16,1:17:10.62:11,0,22	1/1:19,1:20:2.50:10,2,0	0/1:7,0:7:0:0,0,0	0/0:17,0:15:42.14:0,42,811	0/1:21,1:17:44.94:45,0,187	0/1:21,1:21:2.75:63,0,3	0/1:5,0:4:2.95:3,0,19
chr10	100512696	.	CAG	C	668.49	PASS	AB=0.940;AC=28;AF=0.538;AN=52;BaseQRankSum=0.174;DP=484;FS=15.024;HRun=0;HaplotypeScore=120.9111;InbreedingCoeff=0.1925;MQ=39.26;MQ0=7;MQRankSum=0.154;QD=2.05;ReadPosRankSum=2.229;VQSLOD=1.3748;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:11:2.95:0,3,22	0/0:10,0:9:0:0,0,0	./.	./.	0/1:12,1:12:0.23:0,0,6	1/1:21,0:18:5:26,5,0	0/1:20,0:20:10.42:10,0,17	0/0:31,0:28:2.74:0,3,12	0/0:14,0:12:5.72:0,6,46	0/1:16,0:15:9.71:25,0,10	1/1:12,0:13:5.99:51,6,0	0/0:19,0:19:3.91:0,4,26	1/1:12,0:13:4.05:37,4,0	0/0:27,0:27:9.22:0,9,88	0/1:16,2:18:2.94:84,0,3	1/1:15,0:14:8.18:37,8,0	1/1:17,0:17:8.32:57,8,0	0/1:10,4:14:19.19:23,0,19	0/1:22,0:22:4.99:30,0,5	1/1:16,4:18:14.35:136,14,0	0/1:25,0:23:10.45:31,0,10	0/1:19,0:18:4.13:4,0,38	0/0:24,0:24:5.35:0,5,35	0/0:14,0:13:2.50:0,2,9	1/1:16,1:16:14.62:134,15,0	1/1:29,0:28:7.91:102,8,0	1/1:21,0:20:2.84:14,3,0	1/1:6,1:6:2.90:16,3,0
chr10	100513827	.	AC	A	3936.42	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.314;DP=604;FS=1.335;HRun=1;HaplotypeScore=57.0522;InbreedingCoeff=0.9994;MQ=84.37;MQ0=0;MQRankSum=-1.443;QD=35.79;ReadPosRankSum=1.054;VQSLOD=3.7560;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:45.15:629,45,0	0/0:8,0:8:24.05:0,24,358	0/0:21,0:21:60.20:0,60,908	0/0:17,0:17:45.12:0,45,655	0/0:29,0:29:87.28:0,87,1366	0/0:22,0:22:66.22:0,66,1048	0/0:11,0:11:33.11:0,33,528	0/0:36,0:36:99:0,108,1725	0/0:22,0:22:66.23:0,66,1055	0/0:24,0:24:69.22:0,69,1080	0/0:28,0:28:84.27:0,84,1315	1/1:0,19:19:48.16:671,48,0	0/0:23,0:23:69.24:0,69,1097	1/1:0,15:15:42.14:587,42,0	0/0:30,0:30:90.29:0,90,1413	0/0:14,0:14:42.13:0,42,647	0/0:16,0:16:48.11:0,48,715	0/0:24,0:24:72.22:0,72,1120	0/0:17,0:17:51.17:0,51,815	0/0:37,0:37:99:0,105,1671	0/0:14,0:14:42.14:0,42,671	1/1:0,26:26:72.24:1007,72,0	1/1:0,12:12:33.11:455,33,0	1/1:0,19:19:42.14:587,42,0	0/0:26,0:25:75.26:0,75,1195	0/0:24,0:24:72.24:0,72,1139	0/0:24,0:24:72.23:0,72,1127	0/0:27,0:27:81.28:0,81,1291
chr10	100514206	.	C	CAAAAAAAAAAA	20337.18	PASS	AB=0.964;AC=53;AF=0.946;AN=56;BaseQRankSum=-1.531;DP=492;FS=15.080;HRun=13;HaplotypeScore=189.5882;InbreedingCoeff=0.4427;MQ=75.71;MQ0=0;MQRankSum=-0.710;QD=43.09;ReadPosRankSum=0.496;VQSLOD=1.2999;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:18:26.92:533,27,0	1/1:6,0:5:8.99:245,9,0	0/1:26,0:25:37.75:38,0,68	0/0:19,0:17:11.04:0,11,112	1/1:24,0:24:41.78:733,42,0	1/1:18,0:18:41.96:895,42,0	1/1:7,7:13:15:495,15,0	1/1:21,0:21:18.83:687,19,0	1/1:14,0:14:38.96:651,39,0	1/1:27,0:27:71.93:1946,72,0	1/1:22,0:22:44.48:1208,44,0	1/1:7,0:7:5.98:76,6,0	1/1:14,0:14:33:1085,33,0	1/1:8,0:8:6.02:291,6,0	1/1:27,0:25:39.03:1217,39,0	1/1:16,0:15:38.94:978,39,0	1/1:16,0:16:27.36:606,27,0	1/1:10,0:8:15:261,15,0	1/1:16,0:16:39.02:826,39,0	1/1:21,0:33:54.14:1460,54,0	1/1:12,0:12:22.22:345,22,0	1/1:8,0:8:2.04:6,2,0	1/1:6,0:6:3.01:156,3,0	1/1:1,0:1:0.89:2,1,0	1/1:26,0:23:62.90:1576,63,0	1/1:29,0:29:71.98:1400,72,0	1/1:33,0:33:74.06:1748,74,0	1/1:6,8:15:21.07:872,21,0
chr10	100516330	.	A	AAGAGAGAGAGAGAG	19010.47	PASS	AB=0.943;AC=23;AF=0.411;AN=56;BaseQRankSum=0.633;DP=800;FS=1.713;HRun=0;HaplotypeScore=305.4044;InbreedingCoeff=0.7431;MQ=73.18;MQ0=4;MQRankSum=-13.636;QD=49.12;ReadPosRankSum=-6.782;VQSLOD=2.3577;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:41:81.25:0,81,2931	0/0:10,0:10:27.09:0,27,1068	0/0:40,0:30:16.37:0,16,488	0/1:68,0:53:25.51:26,0,1100	0/0:18,0:17:39.13:0,39,1492	1/1:14,6:20:15.05:975,15,0	1/1:15,7:25:21.07:1322,21,0	1/1:32,0:31:33.11:1359,33,0	1/1:19,6:28:26.21:1682,26,0	0/0:28,0:28:51.15:0,51,1686	0/0:18,0:19:42.13:0,42,1491	0/0:29,0:29:81.28:0,81,3007	0/0:29,0:29:72.24:0,72,2753	0/0:21,0:23:54.18:0,54,1964	0/1:35,0:35:13.42:13,0,2571	1/1:19,8:30:44.78:2858,45,0	0/0:39,0:41:70.68:0,71,3256	0/0:20,0:21:5.86:0,6,1538	1/1:23,1:27:45.14:2156,45,0	1/1:16,3:21:27.91:1390,28,0	1/1:22,2:26:15.05:1014,15,0	0/0:29,0:29:17.02:0,17,2248	0/0:29,0:29:66.22:0,66,2352	0/0:38,0:39:32.56:0,33,3240	0/0:16,0:16:39.12:0,39,1417	0/1:31,7:39:47.29:3603,0,47	1/1:22,6:28:42.07:2567,42,0	1/1:6,0:6:5.97:45,6,0
chr10	100517134	.	GACACACAC	G	1469.84	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=6.193;DP=678;FS=4.092;HRun=0;HaplotypeScore=174.4202;InbreedingCoeff=0.8749;MQ=59.29;MQ0=12;MQRankSum=-6.253;QD=9.73;ReadPosRankSum=0.530;VQSLOD=2.6864;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,13:40:10.75:196,11,0	0/0:7,0:7:9.03:0,9,343	0/0:33,0:18:6.02:0,6,96	./.	0/0:12,0:17:42.10:0,42,1173	0/0:19,0:23:36.11:0,36,948	0/0:30,0:31:63.22:0,63,1924	0/0:27,0:26:24.08:0,24,602	0/0:25,0:25:39.12:0,39,1362	0/0:27,0:28:39.60:0,40,1130	0/0:14,0:14:18.06:0,18,616	1/1:5,16:21:18.53:405,19,0	0/0:19,0:23:45.15:0,45,1405	1/1:4,13:19:30.03:602,30,0	0/0:21,0:24:54.13:0,54,1795	0/0:17,0:17:32.82:0,33,1038	0/0:31,0:33:64.05:0,64,1833	0/0:19,0:21:45.14:0,45,1380	0/0:15,0:15:17.48:0,17,263	0/0:29,0:30:51.62:0,52,1429	0/0:55,0:63:99:0,129,4180	1/1:7,10:17:9.91:229,10,0	1/1:6,9:16:3.01:53,3,0	1/1:21,17:38:6.13:152,6,0	0/0:22,0:22:45.14:0,45,1501	0/0:9,0:11:21.07:0,21,571	0/0:16,0:14:30.10:0,30,999	0/0:6,0:5:10.85:0,11,258
chr10	100518994	.	GGTGTGT	G	1156.69	PASS	AB=0.844;AC=14;AF=0.269;AN=52;BaseQRankSum=2.262;DP=665;FS=11.023;HRun=0;HaplotypeScore=130.4103;InbreedingCoeff=0.3067;MQ=70.11;MQ0=23;MQRankSum=-5.122;QD=5.12;ReadPosRankSum=-0.637;VQSLOD=1.8849;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:27:12.03:0,12,238	0/0:12,0:13:14.05:0,14,253	./.	./.	0/0:9,0:9:6.01:0,6,122	0/1:12,0:12:13.97:41,0,14	0/1:17,11:28:40.07:151,0,40	1/1:25,0:25:6.25:35,6,0	0/1:10,8:19:16.81:230,0,17	0/0:19,0:19:9.48:0,9,150	0/0:8,0:10:3.01:0,3,38	0/0:21,0:35:26.02:0,26,460	0/0:18,0:23:27.52:0,28,515	0/0:18,0:29:12.02:0,12,218	0/0:20,0:21:23:0,23,563	0/1:13,6:20:5.39:208,0,5	0/0:24,0:29:38.16:0,38,889	0/0:26,0:27:33.03:0,33,707	0/1:21,0:17:1:1,0,20	0/0:11,3:13:2.37:0,2,8	0/1:48,3:51:44.45:89,0,44	0/0:12,0:16:3.01:0,3,69	0/0:17,0:19:15:0,15,335	0/0:26,0:36:36.47:0,36,628	0/0:17,0:19:21.03:0,21,375	1/1:20,8:28:18.05:292,18,0	1/1:8,5:13:11.48:223,11,0	1/1:6,1:7:3.01:40,3,0
chr10	100521882	.	A	AAAATAAATAAAT	2552.71	PASS	AC=22;AF=0.500;AN=44;BaseQRankSum=-0.042;DP=267;FS=3.474;HRun=0;HaplotypeScore=98.6410;InbreedingCoeff=0.6344;MQ=74.04;MQ0=0;MQRankSum=-3.921;QD=20.59;ReadPosRankSum=-2.620;VQSLOD=1.4739;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:15:11.91:0,12,243	0/0:4,0:4:9.03:0,9,212	1/1:10,0:9:1.82:5,2,0	./.	0/0:8,0:8:3.01:0,3,102	1/1:3,7:10:12.04:573,12,0	1/1:5,0:5:3.01:36,3,0	1/1:39,0:39:12.01:196,12,0	1/1:7,0:8:9.03:415,9,0	0/0:7,0:7:6.02:0,6,143	0/0:7,0:7:3.01:0,3,102	0/0:10,0:14:8.07:0,8,201	0/0:3,0:3:3.01:0,3,102	0/0:9,0:11:6.02:0,6,168	./.	1/1:1,2:3:3.01:174,3,0	0/0:28,0:28:54.17:0,54,1494	0/0:8,0:8:15.03:0,15,340	1/1:13,0:13:6.02:208,6,0	1/1:5,1:7:6.02:260,6,0	./.	./.	./.	./.	0/0:16,0:16:15.03:0,15,402	1/1:7,0:7:3.48:175,3,0	1/1:7,1:8:6.02:348,6,0	1/1:9,3:14:9.03:321,9,0
chr10	100525247	.	T	TAA	12382.12	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-15.477;DP=539;FS=3.009;HRun=7;HaplotypeScore=55.5500;InbreedingCoeff=0.9955;MQ=81.21;MQ0=1;MQRankSum=-2.037;QD=38.45;ReadPosRankSum=0.658;VQSLOD=4.4938;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:26:51.17:837,51,0	0/0:6,0:6:18.05:0,18,210	0/0:20,0:20:43.87:0,44,469	0/0:9,0:9:17.97:0,18,195	0/0:33,0:33:87.23:0,87,1003	1/1:0,23:23:57.19:936,57,0	1/1:4,7:11:18.06:295,18,0	1/1:7,31:38:96.26:1488,96,0	1/1:2,11:13:30.10:493,30,0	0/0:23,0:23:63.17:0,63,726	0/0:26,0:26:72.21:0,72,839	1/1:4,13:17:30.10:492,30,0	0/0:15,0:15:39.09:0,39,443	1/1:4,15:19:39.13:640,39,0	0/0:20,0:19:51.14:0,51,594	1/1:1,19:20:48.16:788,48,0	0/0:25,0:25:69.20:0,69,804	0/0:15,0:15:36.01:0,36,389	1/1:0,12:12:36.11:548,36,0	1/1:1,27:29:78.15:1193,78,0	1/1:2,9:11:27.09:443,27,0	1/1:3,12:15:33.11:542,33,0	1/1:2,11:13:30.10:492,30,0	1/1:1,13:15:42.14:669,42,0	0/0:25,0:25:57.13:0,57,655	1/1:3,28:31:84.29:1373,84,0	1/1:2,18:21:51.14:808,51,0	1/1:0,7:7:21.07:345,21,0
chr10	100525382	.	AT	A	2771.25	PASS	AB=0.894;AC=14;AF=0.250;AN=56;BaseQRankSum=10.232;DP=653;FS=0.780;HRun=10;HaplotypeScore=73.3160;InbreedingCoeff=0.7658;MQ=79.58;MQ0=0;MQRankSum=1.103;QD=15.75;ReadPosRankSum=3.924;VQSLOD=4.2308;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,35:37:92.97:807,93,0	0/0:10,0:10:24.06:0,24,265	0/0:16,0:16:30.03:0,30,304	0/1:20,1:21:11.56:12,0,184	0/0:37,0:37:99:0,105,1161	0/0:22,1:23:31.09:0,31,564	0/0:18,0:18:45.12:0,45,498	0/0:32,3:35:38.59:0,39,864	0/0:16,0:16:45.12:0,45,498	0/0:28,0:28:72.19:0,72,791	0/0:27,0:28:75.04:0,75,811	1/1:6,14:20:38.99:338,39,0	0/0:18,0:18:42.11:0,42,465	1/1:3,15:18:41.99:365,42,0	0/0:28,0:28:72.16:0,72,769	0/0:16,1:17:16.06:0,16,405	0/0:30,3:33:0.04:0,0,685	0/0:8,1:9:1.02:0,1,239	0/0:22,0:22:34.40:0,34,516	0/0:30,0:30:81.17:0,81,863	0/0:16,0:17:41.82:0,42,407	1/1:4,19:23:53.97:469,54,0	1/1:2,20:22:50.99:443,51,0	1/1:3,22:25:59.98:521,60,0	0/0:27,0:27:72.19:0,72,789	0/0:38,0:38:93.25:0,93,1022	0/0:27,0:27:72.18:0,72,787	0/1:8,2:10:2.01:2,0,198
chr10	100525542	.	C	CTTT	8193.64	PASS	AB=0.567;AC=33;AF=0.589;AN=56;BaseQRankSum=5.587;DP=711;FS=0.694;HRun=10;HaplotypeScore=109.5253;InbreedingCoeff=0.9210;MQ=77.65;MQ0=1;MQRankSum=-1.855;QD=18.33;ReadPosRankSum=-1.182;VQSLOD=2.8461;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:34:66.18:1212,66,0	0/0:8,0:9:16.37:0,16,204	0/0:22,0:23:42.07:0,42,454	0/0:16,0:15:32.75:0,33,331	0/0:27,0:27:72.16:0,72,863	1/1:5,2:33:61.06:529,61,0	1/1:2,0:14:28.14:209,28,0	1/1:10,1:39:80.25:676,80,0	1/1:4,0:25:38.35:280,38,0	0/0:29,0:31:62.66:0,63,796	0/0:22,0:23:58.52:0,59,725	1/1:7,17:25:25.61:386,26,0	0/0:30,0:30:72.11:0,72,864	1/1:4,10:16:18.04:277,18,0	0/0:31,0:32:76.53:0,77,933	1/1:3,1:34:50.81:421,51,0	0/0:29,0:29:66.04:0,66,765	0/0:17,0:18:43.38:0,43,525	1/1:7,2:30:62.31:533,62,0	1/1:7,1:31:58.14:558,58,0	0/1:8,0:34:17.12:371,0,17	1/1:3,15:18:36.12:673,36,0	1/1:8,6:17:13.93:219,14,0	1/1:4,18:25:33.99:512,34,0	0/0:23,0:25:62.89:0,63,797	1/1:5,2:31:39.61:646,40,0	1/1:4,1:34:59.80:496,60,0	1/1:0,1:7:20.94:195,21,0
chr10	100528173	.	TACACACACACACAC	T	3586.04	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.856;DP=579;FS=33.742;HRun=0;HaplotypeScore=223.8338;InbreedingCoeff=0.8556;MQ=72.40;MQ0=7;MQRankSum=-8.791;QD=24.90;ReadPosRankSum=0.363;VQSLOD=1.3610;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,9:35:12.04:290,12,0	0/0:8,0:8:6.02:0,6,403	0/0:22,0:13:2.37:0,2,8	0/0:32,0:22:6.02:0,6,184	0/0:18,0:22:39.13:0,39,2229	0/0:12,0:19:24.08:0,24,1080	0/0:24,0:31:57.65:0,58,2379	0/0:24,0:22:18.06:0,18,725	0/0:7,0:9:12.04:0,12,505	0/0:16,0:17:45.15:0,45,2716	0/0:15,0:15:21.07:0,21,1232	1/1:12,7:19:17.22:548,17,0	0/0:19,0:21:39.08:0,39,2233	1/1:10,19:29:9.47:1795,9,0	0/0:21,0:23:42.14:0,42,2645	0/0:8,0:15:30.10:0,30,1328	0/0:24,0:26:51.18:0,51,2971	0/0:14,0:20:36.12:0,36,1989	0/0:11,0:14:18.06:0,18,733	0/0:14,0:16:27.09:0,27,1190	0/0:25,0:32:45.14:0,45,1709	1/1:11,6:17:12.04:403,12,0	1/1:9,6:16:9.03:274,9,0	1/1:17,10:27:9.03:277,9,0	0/0:18,0:19:45.15:0,45,2633	0/0:14,0:21:39.13:0,39,1772	0/0:12,0:14:21.07:0,21,778	0/0:7,0:9:9.03:0,9,395
chr10	100528365	.	T	TTG	7292.21	PASS	AB=0.683;AC=17;AF=0.304;AN=56;BaseQRankSum=-13.330;DP=784;FS=11.709;HRun=0;HaplotypeScore=98.9256;InbreedingCoeff=0.3989;MQ=61.75;MQ0=13;MQRankSum=4.439;QD=20.54;ReadPosRankSum=2.673;VQSLOD=4.9541;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:10.63:0,11,478	0/0:8,0:8:21.06:0,21,249	0/0:40,0:24:18.02:0,18,187	0/0:37,0:25:32.30:0,32,341	0/0:11,0:12:27:0,27,301	0/1:6,18:24:34.98:440,0,35	0/1:13,15:29:37.76:679,0,38	1/1:20,23:44:39.61:957,40,0	1/1:4,14:18:21.07:333,21,0	0/0:21,0:20:48.13:0,48,550	0/1:15,1:16:11.62:12,0,332	0/0:31,0:31:57.17:0,57,674	0/0:23,0:23:42.08:0,42,471	0/0:42,0:43:87.08:0,87,992	0/0:37,0:38:66.03:0,66,760	1/1:13,21:33:1.59:618,2,0	0/0:26,0:26:23.27:0,23,477	0/0:16,0:16:27.05:0,27,317	0/1:13,8:18:3.51:352,0,4	0/1:10,15:25:21.05:588,0,21	1/1:12,41:55:51.84:1285,52,0	0/0:30,0:30:71.94:0,72,816	0/0:14,0:14:41.70:0,42,461	0/0:42,0:42:99:0,102,1185	0/0:18,0:18:45.12:0,45,523	0/1:13,17:30:13.94:712,0,14	1/1:18,16:33:25.86:836,26,0	0/1:10,12:20:64.50:481,0,64
chr10	100533952	.	G	GA	1832.10	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-4.568;DP=306;FS=1.801;HRun=5;HaplotypeScore=37.7208;InbreedingCoeff=0.8871;MQ=65.56;MQ0=0;MQRankSum=-1.670;QD=28.63;ReadPosRankSum=1.383;VQSLOD=3.4830;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:9:18.02:217,18,0	0/0:4,0:4:12.03:0,12,129	0/0:7,0:6:20.04:0,20,181	0/0:6,0:6:18.02:0,18,182	0/0:16,0:16:33.08:0,33,354	0/0:13,0:13:36.09:0,36,387	0/0:12,0:12:30.07:0,30,322	0/0:24,0:24:62.81:0,63,677	0/0:14,0:14:33.06:0,33,346	0/0:19,0:19:54.09:0,54,568	0/0:12,0:12:30.07:0,30,322	1/1:2,9:11:27.09:354,27,0	0/0:12,0:12:36.09:0,36,387	1/1:1,11:12:30.10:394,30,0	0/0:12,0:12:30.07:0,30,322	0/0:8,0:8:21.05:0,21,226	0/0:8,0:8:15.04:0,15,161	0/0:4,0:4:6.01:0,6,64	0/0:8,0:8:21.03:0,21,215	0/0:10,0:10:30.08:0,30,322	0/0:2,0:2:6.02:0,6,64	1/1:1,14:15:42.14:551,42,0	1/1:2,12:14:36.08:455,36,0	1/1:1,2:3:3.01:39,3,0	0/0:15,0:15:39.09:0,39,419	0/0:19,0:19:51.13:0,51,548	0/0:14,0:13:42.06:0,42,438	0/0:3,0:3:6.01:0,6,64
chr10	100536904	.	A	ATCTATCAAAGGTTTGCTT	24079.99	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.780;DP=647;FS=8.371;HRun=0;HaplotypeScore=317.3196;InbreedingCoeff=0.9981;MQ=80.41;MQ0=0;MQRankSum=-16.367;QD=183.82;ReadPosRankSum=0.596;VQSLOD=3.4662;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,6:15:39.13:2842,39,0	0/0:10,0:10:30.09:0,30,1335	0/0:23,0:23:63.19:0,63,2233	0/0:17,0:17:45.09:0,45,2060	0/0:31,0:31:87.30:0,87,3840	0/0:27,0:27:81.28:0,81,4124	0/0:13,0:13:30.10:0,30,1493	0/0:30,0:30:75.26:0,75,3125	0/0:23,0:23:63.21:0,63,2887	0/0:29,0:29:81.27:0,81,3342	0/0:20,0:20:60.21:0,60,3015	1/1:12,5:18:51.14:3553,51,0	0/0:15,0:15:45.15:0,45,2050	1/1:11,7:20:54.19:4188,54,0	0/0:25,0:25:69.24:0,69,3263	0/0:21,0:21:57.20:0,57,2893	0/0:28,0:28:84.29:0,84,3945	0/0:15,0:15:19.25:0,19,1822	0/0:19,0:19:48.16:0,48,2241	0/0:45,0:45:99:0,129,5758	0/0:17,0:17:48.16:0,48,2299	1/1:23,8:34:87.21:6181,87,0	1/1:21,9:33:87.25:5852,87,0	1/1:7,3:11:24.08:1464,24,0	0/0:22,0:22:54.17:0,54,2466	0/0:32,0:32:93.31:0,93,4420	0/0:39,0:39:99:0,108,5156	0/0:15,0:15:45.15:0,45,2104
chr10	100536946	.	A	AT	9159.64	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-18.267;DP=621;FS=6.360;HRun=6;HaplotypeScore=95.6920;InbreedingCoeff=0.9988;MQ=84.10;MQ0=0;MQRankSum=1.928;QD=33.31;ReadPosRankSum=-0.445;VQSLOD=4.0882;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.06:0,42,416	0/0:9,0:9:27.06:0,27,275	0/0:23,0:23:51.10:0,51,514	0/0:17,0:17:40.19:0,40,372	0/0:31,0:31:90.20:0,90,917	1/1:1,28:29:81.26:1019,81,0	1/1:2,15:17:39.12:491,39,0	1/1:1,32:33:96.26:1167,96,0	1/1:3,20:24:60.15:737,60,0	0/0:23,0:23:63.14:0,63,639	0/0:29,0:29:66.14:0,66,673	0/0:19,0:19:57.06:0,57,567	0/0:16,0:16:45.10:0,45,459	0/0:23,0:23:54.11:0,54,550	0/0:26,0:26:75.17:0,75,765	1/1:1,18:19:51.16:642,51,0	0/0:22,0:22:66.15:0,66,673	0/0:9,0:9:27.06:0,27,275	1/1:1,20:21:60.19:754,60,0	1/1:3,38:41:99:1378,111,0	1/1:1,15:16:45.14:566,45,0	0/0:23,0:23:57.12:0,57,578	0/0:26,0:26:63.05:0,63,614	0/0:9,0:9:20.96:0,21,200	0/0:26,0:26:75.16:0,75,758	1/1:2,24:26:44.60:860,45,0	1/1:3,34:38:99:1244,99,0	1/1:3,8:11:24.08:302,24,0
chr10	100537398	.	TACA	T	2086.08	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.139;DP=551;FS=5.547;HRun=0;HaplotypeScore=117.8863;InbreedingCoeff=0.8818;MQ=74.70;MQ0=13;MQRankSum=-0.696;QD=14.79;ReadPosRankSum=3.298;VQSLOD=2.8423;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:3.95:147,4,0	0/0:4,0:4:11.38:0,11,90	0/0:29,0:20:51.01:0,51,534	0/0:37,0:30:86.85:0,87,815	0/0:10,0:10:29.95:0,30,252	0/0:14,0:14:39:0,39,342	0/0:15,0:15:30:0,30,281	0/0:21,0:21:57.06:0,57,532	0/0:15,0:15:28.60:0,29,215	0/0:19,0:19:42.70:0,43,424	0/0:7,0:7:17.98:0,18,150	1/1:33,0:33:82.05:665,82,0	0/0:10,0:9:3.56:0,4,85	1/1:17,0:17:41.90:360,42,0	0/0:23,0:23:37.17:0,37,398	0/0:25,0:25:38.98:0,39,337	0/0:33,0:33:80.26:0,80,1275	0/0:19,0:19:21.51:0,22,261	0/0:25,0:24:59.99:0,60,541	0/0:18,0:18:37.24:0,37,317	0/0:17,0:17:44.96:0,45,385	1/1:10,0:9:11.92:100,12,0	1/1:6,8:14:2.89:25,3,0	1/1:48,0:48:99:960,110,0	0/0:17,0:17:33.78:0,34,290	0/0:23,0:22:47.92:0,48,424	0/0:18,0:18:47.82:0,48,434	0/0:8,0:7:20.97:0,21,176
chr10	100537405	.	ACAG	A	445.38	PASS	AB=1.000;AC=14;AF=0.583;AN=24;BaseQRankSum=2.307;DP=533;FS=0.000;HRun=0;HaplotypeScore=117.9816;InbreedingCoeff=0.3293;MQ=72.29;MQ0=15;MQRankSum=0.086;QD=2.55;ReadPosRankSum=0.969;VQSLOD=1.5285;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:4,0:4:2.96:19,3,0	./.	./.	./.	./.	0/0:11,0:11:2.98:0,3,21	./.	1/1:17,0:17:4.56:17,5,0	./.	./.	0/1:34,0:34:30.46:35,0,30	1/1:11,0:10:17.95:156,18,0	1/1:18,0:18:3:25,3,0	1/1:17,7:24:5.93:56,6,0	0/0:26,0:26:2.49:0,2,10	0/0:35,1:36:30.23:0,30,793	1/1:19,0:19:17.97:157,18,0	./.	./.	./.	./.	./.	0/1:48,0:48:34.62:90,0,35	./.	./.	0/0:16,0:16:8.87:0,9,57	./.
chr10	100537441	.	GCAGCAGCAGCAGCAGCAGCAA	G	1954.99	PASS	AB=1.000;AC=23;AF=0.460;AN=50;BaseQRankSum=-3.935;DP=340;FS=13.235;HRun=0;HaplotypeScore=147.0088;InbreedingCoeff=0.7052;MQ=50.06;MQ0=29;MQRankSum=-2.234;QD=17.46;ReadPosRankSum=-4.604;VQSLOD=0.1874;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:5:0.84:1,0,106	0/0:3,0:3:9:0,9,139	0/0:8,0:3:8.95:0,9,67	0/0:13,0:3:8.96:0,9,97	./.	1/1:7,0:4:8.60:111,9,0	1/1:14,0:12:24.01:384,24,0	1/1:10,0:7:17.96:147,18,0	1/1:1,13:13:6.02:324,6,0	0/0:6,0:4:4.83:0,5,18	./.	0/0:30,0:29:64.51:0,65,1966	0/0:15,0:14:42.12:0,42,1518	0/0:15,0:15:14.23:0,14,419	0/0:19,0:19:20.68:0,21,987	1/1:1,22:23:3.01:143,3,0	0/0:36,0:36:99:0,108,5589	0/0:22,0:22:66.11:0,66,2127	1/1:5,0:3:0.95:62,1,0	1/1:1,0:1:3:25,3,0	1/1:10,0:6:9.43:69,9,0	0/0:6,0:6:8.76:0,9,81	./.	0/0:43,0:43:31.86:0,32,2290	0/0:6,0:5:5.32:0,5,76	1/1:3,0:1:3:27,3,0	1/1:14,0:14:39.10:791,39,0	1/1:3,0:2:5.99:49,6,0
chr10	100537471	.	A	ACAACAACAG	2763.66	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=4.753;DP=460;FS=5.738;HRun=0;HaplotypeScore=133.3044;InbreedingCoeff=0.7797;MQ=52.82;MQ0=11;MQRankSum=-3.143;QD=17.49;ReadPosRankSum=-2.529;VQSLOD=2.1859;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:34.46:610,34,0	0/0:1,0:1:3.01:0,3,70	0/0:27,0:21:53.47:0,53,801	0/0:28,0:13:36.11:0,36,638	0/0:8,0:8:18.04:0,18,345	0/0:14,0:12:32.93:0,33,492	0/0:19,0:18:51:0,51,974	0/0:20,0:17:42.06:0,42,743	0/1:15,0:15:47.49:47,0,83	0/0:9,0:9:21.33:0,21,346	0/0:5,0:3:3:0,3,28	1/1:28,0:29:71.33:1450,71,0	0/0:19,0:19:54.14:0,54,1201	1/1:2,0:16:4.44:14,4,0	0/0:21,0:21:51.06:0,51,1156	1/1:20,0:20:3:27,3,0	0/0:35,0:35:99:0,99,2506	0/0:23,0:23:63.16:0,63,1598	0/0:11,0:11:32.98:0,33,439	0/0:12,0:11:32.93:0,33,421	0/0:11,0:8:17.55:0,18,297	1/1:11,0:11:27.48:420,27,0	1/1:5,0:5:10.78:136,11,0	1/1:10,28:41:18.21:243,18,0	0/0:12,0:12:22.62:0,23,412	0/0:7,0:6:18.04:0,18,257	0/0:12,0:12:33.10:0,33,835	0/0:8,0:8:24.06:0,24,565
chr10	100538812	.	C	CT	5166.77	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-12.369;DP=618;FS=2.757;HRun=1;HaplotypeScore=57.1552;InbreedingCoeff=0.9982;MQ=83.19;MQ0=0;MQRankSum=-0.183;QD=40.05;ReadPosRankSum=3.955;VQSLOD=5.4686;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:75.25:1123,75,0	0/0:10,0:10:30.09:0,30,376	0/0:17,0:17:40.49:0,40,532	0/0:18,0:18:48.14:0,48,587	0/0:26,0:26:72.20:0,72,904	0/0:25,0:25:75.23:0,75,958	0/0:29,0:29:84.20:0,84,1042	0/0:33,0:33:96.28:0,96,1193	0/0:25,0:25:72.22:0,72,920	0/0:23,0:23:69.22:0,69,879	0/0:20,0:20:60.17:0,60,762	1/1:0,16:16:45.15:674,45,0	0/0:26,0:26:75.18:0,75,919	1/1:0,21:21:60.20:898,60,0	0/0:28,0:28:81.24:0,81,1024	0/0:20,0:20:57.16:0,57,710	0/0:17,0:17:48.16:0,48,622	0/0:16,0:16:45.01:0,45,558	0/0:19,0:19:54.17:0,54,688	0/0:28,0:28:78.23:0,78,989	0/0:26,0:26:75.23:0,75,958	1/1:0,15:15:42.14:629,42,0	1/1:2,23:25:60.20:899,60,0	1/1:0,24:23:63.21:944,63,0	0/0:18,0:18:54.17:0,54,687	0/0:27,0:27:81.21:0,81,1006	0/0:32,0:32:96.30:0,96,1225	0/0:6,0:6:18.06:0,18,234
chr10	100539296	.	CCTT	C	5052.38	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.471;DP=595;FS=1.770;HRun=0;HaplotypeScore=86.0024;InbreedingCoeff=0.9980;MQ=76.07;MQ0=0;MQRankSum=-1.695;QD=40.42;ReadPosRankSum=3.952;VQSLOD=6.1079;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:39:99:1732,108,0	0/0:12,0:12:33.11:0,33,729	0/0:19,0:19:45.15:0,45,995	0/0:20,0:20:51.17:0,51,1044	0/0:23,0:23:66.23:0,66,1457	0/0:25,0:25:72.25:0,72,1589	0/0:23,0:23:66.19:0,66,1374	0/0:24,0:24:69.24:0,69,1505	0/0:19,0:19:57.20:0,57,1252	0/0:28,0:28:78.27:0,78,1689	0/0:19,0:19:51.16:0,51,1085	1/1:1,15:16:42.14:675,42,0	0/0:14,0:14:42.14:0,42,927	1/1:2,19:21:48.16:771,48,0	0/0:23,0:23:69.24:0,69,1510	0/0:29,0:29:87.30:0,87,1907	0/0:27,0:27:81.28:0,81,1754	0/0:9,0:9:27.09:0,27,589	0/0:31,0:31:81.28:0,81,1751	0/0:23,0:23:66.20:0,66,1376	0/0:27,0:27:81.28:0,81,1788	1/1:2,15:17:42.14:668,42,0	1/1:0,16:16:42.14:675,42,0	1/1:0,16:16:33.11:531,33,0	0/0:24,0:23:69.24:0,69,1523	0/0:22,0:22:60.21:0,60,1292	0/0:23,0:22:66.21:0,66,1388	0/0:6,0:6:18.06:0,18,397
chr10	100547264	.	ATAG	A	595.24	PASS	AB=0.911;AC=9;AF=0.161;AN=56;BaseQRankSum=7.150;DP=671;FS=3.818;HRun=0;HaplotypeScore=156.8405;InbreedingCoeff=0.6365;MQ=86.78;MQ0=0;MQRankSum=-6.702;QD=4.34;ReadPosRankSum=-4.040;VQSLOD=1.5443;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:24.05:278,24,0	0/0:8,0:8:24.08:0,24,567	0/0:19,0:19:57.20:0,57,1299	0/0:32,0:32:87.20:0,87,1734	0/0:36,0:36:99:0,108,2458	0/0:28,0:28:84.29:0,84,1961	0/0:24,0:24:72.25:0,72,1678	0/0:25,0:25:75.24:0,75,1654	0/0:21,0:21:63.20:0,63,1437	0/0:32,0:32:96.33:0,96,2221	0/0:23,0:23:69.22:0,69,1583	1/1:26,0:27:0.07:135,0,0	0/0:15,0:15:45.15:0,45,1063	0/1:21,0:21:2.79:26,0,3	0/0:23,0:23:63.20:0,63,1423	0/0:32,0:31:96.32:0,96,2218	0/0:21,0:21:63.22:0,63,1437	0/0:11,0:11:27.09:0,27,614	0/0:10,0:10:30.10:0,30,694	0/0:22,0:22:66.23:0,66,1557	0/0:38,0:38:99:0,111,2557	0/1:16,6:22:4.58:91,0,5	0/1:17,1:18:6.53:92,0,7	1/1:14,0:14:10.77:118,11,0	0/0:32,0:32:93.31:0,93,2056	0/0:28,0:28:84.29:0,84,1952	0/0:44,0:44:99:0,132,2943	0/0:10,0:10:30.10:0,30,708
chr10	100547265	.	T	TGTCTGGTTTG	12392.89	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.103;DP=644;FS=0.826;HRun=0;HaplotypeScore=198.5308;InbreedingCoeff=0.9988;MQ=88.74;MQ0=0;MQRankSum=-14.619;QD=112.66;ReadPosRankSum=0.970;VQSLOD=5.2556;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:30:79.65:3243,80,0	0/0:8,0:8:24.08:0,24,825	0/0:21,0:21:57.20:0,57,1777	0/0:30,0:30:87.17:0,87,2366	0/0:38,0:38:99:0,108,3440	0/0:29,0:29:84.29:0,84,2752	0/0:24,0:24:72.23:0,72,2367	0/0:25,0:25:75.24:0,75,2229	0/0:22,0:22:63.20:0,63,2110	0/0:32,0:32:96.32:0,96,3123	0/0:23,0:23:69.22:0,69,2285	1/1:3,20:23:68.26:2906,68,0	0/0:15,0:15:45.15:0,45,1571	1/1:1,14:15:45.14:1960,45,0	0/0:21,0:21:63.19:0,63,2042	0/0:32,0:31:96.32:0,96,3208	0/0:21,0:21:63.22:0,63,2079	0/0:10,0:10:27.09:0,27,896	0/0:10,0:10:30.10:0,30,997	0/0:22,0:22:66.23:0,66,2227	0/0:37,0:37:99:0,111,3706	1/1:6,15:21:45.15:1989,45,0	1/1:1,9:10:27.09:1165,27,0	1/1:1,10:11:29.88:1129,30,0	0/0:31,0:31:93.31:0,93,2923	0/0:28,0:28:84.29:0,84,2728	0/0:44,0:44:99:0,132,4158	0/0:11,0:11:30.10:0,30,981
chr10	100547266	.	AG	A	1274.60	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.537;DP=638;FS=0.836;HRun=1;HaplotypeScore=123.7213;InbreedingCoeff=0.9981;MQ=88.45;MQ0=0;MQRankSum=-14.517;QD=11.80;ReadPosRankSum=2.126;VQSLOD=2.1869;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:29:70.84:415,71,0	0/0:8,0:8:24.08:0,24,383	0/0:22,0:22:66.06:0,66,1016	0/0:28,0:28:75.23:0,75,1137	0/0:38,0:38:99:0,114,1778	0/0:29,0:29:87.30:0,87,1389	0/0:25,0:25:75.24:0,75,1175	0/0:23,0:23:69.24:0,69,1103	0/0:21,0:21:63.21:0,63,1004	0/0:32,0:32:96.33:0,96,1534	0/0:23,0:23:66.23:0,66,1054	1/1:3,20:23:64.55:346,65,0	0/0:15,0:15:45.15:0,45,719	1/1:0,14:14:40.53:224,41,0	0/0:20,0:20:60.20:0,60,959	0/0:32,0:31:93.32:0,93,1487	0/0:21,0:21:63.17:0,63,971	0/0:11,0:11:27.09:0,27,432	0/0:10,0:10:30.10:0,30,480	0/0:23,0:23:69.22:0,69,1079	0/0:36,0:36:99:0,108,1727	1/1:6,15:21:42.35:218,42,0	1/1:1,9:10:24.26:117,24,0	1/1:1,10:11:21.98:143,22,0	0/0:30,0:30:90.27:0,90,1372	0/0:28,0:28:84.29:0,84,1343	0/0:44,0:44:99:0,129,1990	0/0:11,0:11:33.11:0,33,523
chr10	100549044	.	AT	A	3550.96	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=8.056;DP=562;FS=16.943;HRun=2;HaplotypeScore=90.1542;InbreedingCoeff=0.9582;MQ=87.30;MQ0=1;MQRankSum=-3.615;QD=21.26;ReadPosRankSum=-3.831;VQSLOD=1.7181;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:36.82:0,37,340	0/0:11,0:11:33.11:0,33,493	0/0:23,0:23:57.07:0,57,737	0/0:23,0:22:49.32:0,49,673	0/0:26,0:26:75.21:0,75,1061	1/1:4,9:13:38.94:333,39,0	1/1:5,10:15:26.91:226,27,0	1/1:21,5:26:65.88:566,66,0	1/1:4,14:18:53.94:464,54,0	0/0:28,0:28:81.27:0,81,1194	0/0:17,0:17:51.15:0,51,727	0/0:16,0:16:18.43:0,18,192	0/0:19,0:19:54.16:0,54,754	0/0:19,0:19:43.30:0,43,300	0/0:32,0:32:96.29:0,96,1378	1/1:1,6:7:17.93:151,18,0	0/0:38,0:38:99:0,111,1643	0/0:20,0:20:57.18:0,57,833	1/1:9,6:15:41.75:334,42,0	1/1:11,3:15:41.73:333,42,0	1/1:15,8:25:54.10:455,54,0	0/0:18,0:18:40.43:0,40,311	0/0:12,1:13:21.41:0,21,166	0/0:35,0:34:67.03:0,67,465	0/0:19,0:19:51.64:0,52,764	1/1:9,9:18:0.04:323,0,0	1/1:2,6:8:21.01:197,21,0	1/1:3,4:7:20.95:169,21,0
chr10	100549048	.	CCCA	C	3761.12	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=14.694;DP=570;FS=15.304;HRun=0;HaplotypeScore=111.3448;InbreedingCoeff=0.7628;MQ=88.89;MQ0=1;MQRankSum=-3.739;QD=12.02;ReadPosRankSum=-1.867;VQSLOD=2.1116;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:32.78:33,0,68	0/0:13,0:13:39.12:0,39,773	0/0:25,0:25:63.12:0,63,1123	0/0:24,0:23:44.24:0,44,1046	0/0:23,0:23:66.18:0,66,1286	1/1:14,0:14:36.71:229,37,0	1/1:18,0:18:18.67:154,19,0	1/1:23,0:23:55.18:447,55,0	1/1:18,1:19:33:302,33,0	0/0:27,0:27:78.24:0,78,1547	0/0:17,0:17:48.13:0,48,939	1/1:15,2:17:28.48:213,28,0	0/0:19,0:19:51.17:0,51,1049	1/1:19,2:21:47.94:292,48,0	0/0:35,0:35:99:0,99,1899	1/1:7,0:7:16.67:90,17,0	0/0:36,0:36:99:0,108,2301	0/0:20,0:20:57.63:0,58,1132	1/1:17,0:17:33.69:259,34,0	1/1:14,0:14:38.47:355,38,0	1/1:30,0:30:3.24:218,3,0	1/1:17,1:18:33.79:191,34,0	1/1:12,0:12:19.69:92,20,0	1/1:33,1:33:61.55:279,62,0	0/0:18,0:18:50.77:0,51,1038	0/1:17,0:17:19.93:383,0,20	0/1:12,0:12:8.03:142,0,8	1/1:5,0:5:11.52:84,12,0
chr10	100549049	.	CCA	C	7866.21	PASS	AB=0.792;AC=33;AF=0.589;AN=56;BaseQRankSum=13.959;DP=564;FS=17.066;HRun=0;HaplotypeScore=85.2758;InbreedingCoeff=0.9346;MQ=87.99;MQ0=1;MQRankSum=-2.774;QD=25.05;ReadPosRankSum=-3.167;VQSLOD=3.4437;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,6:35:39.10:385,39,0	0/0:13,0:13:39.12:0,39,624	0/0:24,0:24:48.19:0,48,885	0/0:23,0:22:44.07:0,44,831	0/0:22,0:22:66.18:0,66,1050	1/1:13,1:14:42.09:529,42,0	1/1:16,2:18:24.09:309,24,0	1/1:18,4:22:56.89:517,57,0	1/1:18,1:19:53.75:696,54,0	0/0:26,0:26:78.25:0,78,1262	0/0:16,0:16:48.13:0,48,765	1/1:4,13:17:30.55:411,31,0	0/0:18,0:18:51.15:0,51,831	1/1:2,19:21:51.15:738,51,0	0/0:34,0:34:99:0,99,1539	1/1:8,1:9:20.99:247,21,0	0/0:36,0:36:99:0,108,1857	0/0:20,0:20:57.63:0,58,920	1/1:16,1:17:44.95:450,45,0	1/1:13,2:15:41.98:383,42,0	1/1:29,0:29:55.27:549,55,0	1/1:1,16:17:36.11:530,36,0	1/1:1,11:12:20.80:291,21,0	1/1:1,32:32:66.22:1009,66,0	0/0:18,0:18:50.76:0,51,838	0/1:14,5:19:6.84:406,0,7	1/1:9,3:12:23.87:229,24,0	1/1:4,1:5:15.04:188,15,0
chr10	100549050	.	CA	C	5943.26	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=15.070;DP=560;FS=10.801;HRun=1;HaplotypeScore=81.4984;InbreedingCoeff=0.9751;MQ=87.57;MQ0=1;MQRankSum=-4.714;QD=19.17;ReadPosRankSum=-3.690;VQSLOD=3.2025;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,27:35:51.03:683,51,0	0/0:13,0:13:39.04:0,39,479	0/0:22,1:23:47.83:0,48,690	0/0:23,0:22:36.63:0,37,640	0/0:22,0:22:66.17:0,66,837	1/1:7,8:15:45.01:413,45,0	1/1:3,15:18:23.95:219,24,0	1/1:20,2:22:56.86:486,57,0	1/1:7,12:19:57.02:529,57,0	0/0:27,0:27:81.23:0,81,1028	0/0:16,0:16:48.12:0,48,600	1/1:16,0:16:29.62:202,30,0	0/0:19,0:19:54.06:0,54,658	1/1:21,0:21:50.55:357,51,0	0/0:33,0:33:98.98:0,99,1204	1/1:4,5:9:20.97:190,21,0	0/0:36,0:36:99:0,108,1454	0/0:20,0:20:57.61:0,58,723	1/1:1,16:17:44.89:377,45,0	1/1:14,1:15:41.92:352,42,0	1/1:16,10:26:60.13:555,60,0	1/1:17,0:17:35.69:253,36,0	1/1:11,0:11:20.59:143,21,0	1/1:33,0:32:65.47:467,65,0	0/0:18,0:18:51.15:0,51,655	1/1:6,13:19:4.11:323,4,0	1/1:9,3:12:26.99:262,27,0	1/1:2,3:5:14.99:131,15,0
chr10	100563707	.	ATCTCTCTCTCTCTCTCTCTCTCTCTC	A	2833.62	PASS	AB=0.872;AC=16;AF=0.286;AN=56;BaseQRankSum=4.788;DP=615;FS=3.376;HRun=0;HaplotypeScore=334.0292;InbreedingCoeff=0.2957;MQ=64.55;MQ0=24;MQRankSum=-1.689;QD=13.76;ReadPosRankSum=0.874;VQSLOD=1.6469;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:21.05:0,21,1219	0/0:9,0:8:14.49:0,14,1060	0/0:56,0:23:3.01:0,3,32	0/0:70,0:34:0.89:0,1,2	0/0:15,0:15:3.01:0,3,350	0/1:9,7:15:4.10:394,0,4	1/1:17,0:17:0.91:71,1,0	0/1:30,8:38:28.48:223,0,28	0/1:14,1:15:4.12:213,0,4	0/0:19,0:19:24.02:0,24,1134	0/0:10,0:10:6.02:0,6,401	0/0:22,0:22:4.52:0,5,2288	0/0:20,0:20:28.60:0,29,1783	0/0:17,0:16:12.04:0,12,947	0/0:23,0:23:22.60:0,23,1462	1/1:9,5:16:4.93:955,5,0	0/0:17,0:18:18.52:0,19,871	0/0:9,0:9:17.99:0,18,1383	0/1:17,0:16:20.44:74,0,20	1/1:6,9:14:5.37:210,5,0	0/1:25,0:25:17.07:34,0,17	0/0:20,0:20:12.04:0,12,1404	0/0:19,0:18:3.01:0,3,75	0/0:35,0:34:48.21:0,48,3554	0/0:11,0:11:3.01:0,3,249	0/1:12,1:16:19.24:432,0,19	1/1:13,0:14:14.75:228,15,0	1/1:16,0:14:14.97:162,15,0
chr10	100565770	.	T	TA	43.89	PASS	AB=0.954;AC=5;AF=0.089;AN=56;BaseQRankSum=-0.835;DP=705;FS=6.196;HRun=12;HaplotypeScore=128.5446;InbreedingCoeff=0.2753;MQ=66.89;MQ0=7;MQRankSum=1.563;QD=0.45;ReadPosRankSum=-3.001;VQSLOD=-0.0086;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,1:43:72.62:0,73,666	0/0:17,0:18:46.78:0,47,334	0/0:31,0:13:0.31:0,0,58	0/0:31,0:19:19.33:0,19,130	0/0:43,3:46:22.87:0,23,654	0/0:17,0:16:14.23:0,14,40	0/0:20,0:19:18.33:0,18,52	0/0:37,0:36:61.61:0,62,302	0/0:15,0:15:21.09:0,21,69	0/0:32,0:32:80.35:0,80,581	0/0:25,0:25:53.57:0,54,386	0/0:22,0:22:53.64:0,54,392	0/1:15,2:17:13.61:14,0,239	0/0:22,0:23:50.12:0,50,423	0/0:22,1:25:26.06:0,26,336	0/0:23,0:23:34.95:0,35,104	0/0:43,1:44:69.16:0,69,668	0/0:17,0:17:37.95:0,38,267	1/1:19,0:19:17.24:119,17,0	0/1:32,0:32:20.22:20,0,64	0/0:6,0:6:2.98:0,3,22	0/0:19,0:19:43.79:0,44,312	0/0:21,0:21:50.60:0,51,363	0/0:23,0:25:31.56:0,32,375	0/0:20,1:22:31.33:0,31,376	0/0:32,0:32:48.63:0,49,197	0/1:28,1:29:6.26:6,0,28	0/0:12,0:12:17.14:0,17,64
chr10	100565777	.	AAAAAAC	A	2302.09	PASS	AB=0.974;AC=14;AF=0.250;AN=56;BaseQRankSum=15.572;DP=698;FS=0.736;HRun=0;HaplotypeScore=174.9928;InbreedingCoeff=0.4706;MQ=62.09;MQ0=7;MQRankSum=-7.539;QD=9.59;ReadPosRankSum=0.881;VQSLOD=2.6456;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,3145	0/0:16,0:16:48.16:0,48,1376	0/0:35,0:14:31.76:0,32,515	0/0:30,0:17:30.56:0,31,545	0/0:46,0:46:99:0,129,3690	0/1:18,0:17:1.33:146,0,1	1/1:20,2:21:26.97:293,27,0	0/1:37,1:37:13.99:415,0,14	1/1:16,0:16:28.25:211,28,0	0/0:34,0:34:99:0,102,2827	0/0:25,0:25:63.14:0,63,1710	0/0:21,0:21:60.21:0,60,1818	0/0:15,0:15:45.15:0,45,1286	0/0:22,0:22:66.23:0,66,2117	0/0:21,0:21:56.93:0,57,1712	1/1:25,0:25:49.92:409,50,0	0/0:43,0:43:99:0,111,3113	0/0:16,0:16:42.12:0,42,1140	0/1:16,0:16:20.89:25,0,21	0/1:33,0:33:21.91:118,0,22	0/0:8,0:8:4.25:0,4,34	0/0:18,0:18:51.09:0,51,1377	0/0:22,0:22:66.09:0,66,1680	0/0:23,0:23:63.14:0,63,1732	0/0:23,0:23:46.10:0,46,1997	0/1:32,2:34:99:608,0,198	1/1:26,0:26:14.04:95,14,0	0/1:11,1:12:10.87:161,0,11
chr10	100565778	.	AAAAAC	A	5718.23	PASS	AB=0.579;AC=21;AF=0.375;AN=56;BaseQRankSum=13.696;DP=703;FS=1.564;HRun=0;HaplotypeScore=152.7796;InbreedingCoeff=0.8952;MQ=62.00;MQ0=7;MQRankSum=-6.806;QD=22.96;ReadPosRankSum=-0.864;VQSLOD=4.6605;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,108,2513	0/0:16,0:16:42.14:0,42,1098	0/0:36,0:15:31.30:0,31,462	0/0:30,0:17:30.28:0,30,448	0/0:46,0:46:99:0,126,2913	1/1:2,16:17:21.07:383,21,0	1/1:4,18:21:27.09:460,27,0	1/1:13,26:38:62.17:1094,62,0	1/1:3,13:16:30.10:521,30,0	0/0:34,0:34:96.31:0,96,2239	0/0:26,0:26:60.19:0,60,1351	0/0:21,0:21:60.20:0,60,1467	0/0:15,0:15:42.14:0,42,988	0/0:22,0:22:66.23:0,66,1759	0/0:20,0:20:57.16:0,57,1426	1/1:2,23:25:51.14:898,51,0	0/0:44,0:44:99:0,108,2528	0/0:16,0:16:39.09:0,39,873	1/1:17,0:17:35.17:203,35,0	1/1:33,1:34:53.56:497,54,0	1/1:8,0:8:2.22:7,2,0	0/0:18,0:18:51.15:0,51,1110	0/0:22,0:22:44.40:0,44,1303	0/0:23,0:23:60.19:0,60,1359	0/0:24,0:24:69.22:0,69,1703	0/1:9,24:33:99:1020,0,111	1/1:25,1:26:41.55:317,42,0	1/1:7,4:11:18.02:318,18,0
chr10	100565779	.	AAAAC	A	5123.12	PASS	AB=0.846;AC=19;AF=0.339;AN=56;BaseQRankSum=14.682;DP=696;FS=0.338;HRun=0;HaplotypeScore=140.9369;InbreedingCoeff=0.7765;MQ=62.05;MQ0=7;MQRankSum=-6.672;QD=21.00;ReadPosRankSum=-0.977;VQSLOD=4.5640;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,108,2237	0/0:16,0:16:48.11:0,48,989	0/0:36,0:15:23.96:0,24,400	0/0:30,0:17:23.80:0,24,355	0/0:47,0:47:99:0,132,2631	1/1:18,0:17:21.06:230,21,0	1/1:21,0:20:27.07:295,27,0	1/1:36,0:35:5.31:568,5,0	1/1:16,0:16:29.82:323,30,0	0/0:35,0:35:99:0,102,2068	0/0:26,0:26:66.08:0,66,1224	0/0:21,0:21:60.20:0,60,1304	0/0:16,0:16:48.11:0,48,934	0/0:22,0:22:66.23:0,66,1523	0/0:20,0:20:60.01:0,60,1231	1/1:24,1:25:51.14:584,51,0	0/0:41,0:41:99:0,110,2179	0/0:16,0:16:39.07:0,39,804	1/1:1,16:17:47.97:599,48,0	1/1:6,28:34:80.47:975,80,0	0/1:1,6:7:15.78:30,0,16	0/0:18,0:18:51.09:0,51,1002	0/0:22,0:22:63.96:0,64,1180	0/0:22,0:22:63.19:0,63,1251	0/0:24,0:24:71.03:0,71,1446	0/1:33,0:33:99:653,0,117	1/1:3,23:26:47.79:679,48,0	0/1:11,0:11:1.76:187,0,2
chr10	100565782	.	AC	A	2286.34	PASS	AB=0.985;AC=20;AF=0.357;AN=56;BaseQRankSum=16.513;DP=690;FS=2.897;HRun=1;HaplotypeScore=112.6158;InbreedingCoeff=0.8459;MQ=61.39;MQ0=7;MQRankSum=-7.250;QD=9.57;ReadPosRankSum=-0.787;VQSLOD=1.1358;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,101,1174	0/0:16,0:16:45.57:0,46,505	0/0:35,0:15:37.23:0,37,318	0/0:28,0:17:32.37:0,32,280	0/0:45,0:45:99:0,132,1421	1/1:18,0:17:20.13:107,20,0	1/1:21,0:20:25.88:137,26,0	1/1:35,0:34:2.87:356,3,0	1/1:15,1:16:28.51:172,29,0	0/0:38,0:38:99:0,108,1195	0/0:25,0:25:69.03:0,69,719	0/0:21,0:21:63.16:0,63,716	0/0:16,0:16:47.13:0,47,486	0/0:22,0:22:65.68:0,66,739	0/0:21,0:21:52.65:0,53,618	1/1:25,0:25:49.15:278,49,0	0/0:41,0:41:99:0,113,1196	0/0:17,1:18:14.26:0,14,442	1/1:17,0:17:45.46:268,45,0	1/1:32,0:32:69.93:404,70,0	0/1:7,0:7:0.34:0,0,20	0/0:18,0:18:50.71:0,51,558	0/0:21,1:22:25.78:0,26,578	0/0:23,0:23:60.68:0,61,671	0/0:25,0:25:54.50:0,55,742	0/1:31,1:32:28.05:381,0,28	1/1:26,0:26:46.72:278,47,0	1/1:10,0:10:14.43:112,14,0
chr10	100565783	.	CA	C	1212.62	PASS	AB=0.972;AC=19;AF=0.339;AN=56;BaseQRankSum=15.410;DP=694;FS=1.618;HRun=12;HaplotypeScore=119.1784;InbreedingCoeff=0.7689;MQ=61.26;MQ0=8;MQRankSum=-8.192;QD=4.99;ReadPosRankSum=0.645;VQSLOD=2.1332;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1466	0/0:16,0:16:42.13:0,42,570	0/0:34,0:15:34.35:0,34,425	0/0:29,0:18:35.70:0,36,401	0/0:46,0:46:99:0,132,1789	0/1:18,0:17:3.49:44,0,3	1/1:22,0:21:21.53:76,22,0	1/1:34,0:33:27.13:454,27,0	1/1:15,1:16:21.10:110,21,0	0/0:37,0:37:99:0,104,1422	0/0:25,0:25:66.21:0,66,897	0/0:21,0:21:63.21:0,63,870	0/0:16,0:16:45.15:0,45,623	0/0:22,0:22:64.46:0,64,881	0/0:21,0:21:59.78:0,60,789	1/1:24,1:25:40.87:168,41,0	0/0:41,0:41:99:0,111,1517	0/0:17,1:18:22.06:0,22,556	1/1:18,0:17:29.39:135,29,0	1/1:30,2:32:29.79:162,30,0	1/1:8,0:8:2.22:7,2,0	0/0:18,0:18:51.16:0,51,697	0/0:21,0:21:44.41:0,44,720	0/0:23,0:23:63.19:0,63,844	0/0:25,0:25:71.60:0,72,970	0/1:33,0:33:92.38:145,0,92	1/1:26,0:26:25.44:74,25,0	0/1:10,1:11:7.27:41,0,7
chr10	100567016	.	CTG	C	1019.39	PASS	AB=0.538;AC=29;AF=0.558;AN=52;BaseQRankSum=11.965;DP=578;FS=14.029;HRun=0;HaplotypeScore=131.4297;InbreedingCoeff=0.7627;MQ=69.23;MQ0=9;MQRankSum=-0.116;QD=3.00;ReadPosRankSum=3.674;VQSLOD=1.9096;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,26:33:0:0,0,0	0/0:3,0:3:8.89:0,9,100	0/0:34,0:27:57.03:0,57,793	0/0:36,0:28:69.15:0,69,1007	./.	1/1:18,0:18:21.71:69,22,0	1/1:34,0:36:20.98:130,21,0	0/1:3,0:17:35.02:35,0,35	1/1:17,0:19:28.19:98,28,0	0/0:16,0:16:42.14:0,42,661	0/0:15,0:15:39.11:0,39,573	1/1:4,21:25:14.37:147,14,0	0/0:19,0:19:48.07:0,48,647	1/1:4,12:16:17.33:150,17,0	0/0:18,0:18:46.80:0,47,585	1/1:21,0:24:6.03:86,6,0	0/0:40,0:40:82.83:0,83,1191	0/0:16,0:16:33.54:0,34,462	1/1:5,0:11:14.98:56,15,0	./.	1/1:42,0:42:63.38:214,63,0	1/1:2,24:26:6.01:62,6,0	0/1:0,10:10:0:0,0,0	1/1:4,2:22:2.95:34,3,0	0/0:16,0:16:39.13:0,39,619	1/1:2,0:17:8.18:52,8,0	1/1:10,0:13:16.11:69,16,0	1/1:6,0:5:3.37:9,3,0
chr10	100567027	.	CGTGTGTGTGTGTGT	C	1220	PASS	AB=0.969;AC=10;AF=0.185;AN=54;BaseQRankSum=6.304;DP=590;FS=3.511;HRun=0;HaplotypeScore=232.6935;InbreedingCoeff=0.6361;MQ=58.53;MQ0=19;MQRankSum=-6.088;QD=9.24;ReadPosRankSum=1.543;VQSLOD=2.2515;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,1:29:13.04:55,0,13	0/0:3,0:4:6.02:0,6,219	0/1:24,0:17:0:0,0,0	./.	0/0:17,0:16:3.01:0,3,69	0/0:25,0:23:26.62:0,27,371	0/0:35,0:37:31.88:0,32,527	0/0:20,0:20:18.49:0,18,322	0/0:22,0:24:18.52:0,19,315	0/0:19,0:18:21.53:0,22,668	0/0:15,0:15:27.09:0,27,1190	1/1:17,7:23:17.42:498,17,0	0/0:19,0:21:39.13:0,39,1865	1/1:7,5:12:15.05:509,15,0	0/0:16,0:19:36.12:0,36,1394	0/0:19,0:22:21.03:0,21,308	0/0:38,0:40:55.54:0,56,2747	0/0:14,0:17:27.09:0,27,1441	0/0:10,0:11:18.05:0,18,294	0/0:16,0:15:9.03:0,9,219	0/0:50,0:49:64.12:0,64,1185	1/1:15,7:22:6.02:205,6,0	0/0:10,0:10:0:0,0,1	1/1:16,0:18:3.01:95,3,0	0/0:13,0:13:33.11:0,33,1541	0/0:18,0:19:20.32:0,20,257	0/0:14,0:16:22.80:0,23,481	0/0:7,0:5:3.01:0,3,82
chr10	100569752	.	T	TCTC	22292.41	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=6.667;DP=684;FS=5.196;HRun=0;HaplotypeScore=153.2209;InbreedingCoeff=0.9997;MQ=68.24;MQ0=1;MQRankSum=-16.987;QD=53.33;ReadPosRankSum=-2.543;VQSLOD=5.8446;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,47:54:99:2801,129,0	0/0:14,0:14:39.13:0,39,649	0/0:20,0:19:30.69:0,31,735	0/0:34,0:34:52.21:0,52,992	1/1:3,19:23:57.17:1247,57,0	1/1:5,17:21:54.18:1186,54,0	1/1:1,28:29:81.28:1826,81,0	1/1:8,31:39:99:2196,108,0	0/0:20,0:20:57.18:0,57,900	0/0:27,0:27:81.26:0,81,1305	0/0:16,0:16:48.15:0,48,775	1/1:3,23:26:72.25:1563,72,0	0/0:19,0:19:54.13:0,54,821	1/1:3,29:32:78.27:1762,78,0	0/0:22,0:22:66.23:0,66,1098	1/1:5,16:21:51.17:1152,51,0	0/0:39,0:38:99:0,111,1823	0/0:33,0:33:90.26:0,90,1462	1/1:11,9:20:42.06:774,42,0	1/1:4,13:17:45.15:970,45,0	1/1:6,21:26:48.16:1052,48,0	1/1:5,9:14:33.10:670,33,0	1/1:3,7:10:27.09:540,27,0	1/1:12,15:27:53.96:1143,54,0	0/0:22,0:21:57.18:0,57,923	1/1:4,17:21:57.20:1282,57,0	1/1:5,20:25:72.11:1507,72,0	1/1:2,8:10:30.10:622,30,0
chr10	100569764	.	CTG	C	5846.65	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=7.677;DP=674;FS=3.578;HRun=0;HaplotypeScore=189.9871;InbreedingCoeff=0.9685;MQ=65.32;MQ0=2;MQRankSum=-11.011;QD=25.09;ReadPosRankSum=-0.294;VQSLOD=5.3764;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:52:84.45:0,84,756	0/0:13,0:13:33.10:0,33,520	0/0:25,0:24:45.15:0,45,706	0/0:31,0:30:47.76:0,48,915	1/1:7,16:24:41.75:485,42,0	1/1:5,15:20:45.14:563,45,0	1/1:15,13:29:50.99:614,51,0	1/1:14,19:34:63.03:763,63,0	0/0:17,0:18:51.15:0,51,791	0/0:26,0:26:63.19:0,63,1013	0/0:17,0:17:39.11:0,39,616	0/0:8,0:32:72:0,72,654	0/0:20,0:20:54.18:0,54,883	0/0:17,0:30:57:0,57,539	0/0:23,0:23:57.19:0,57,940	1/1:7,12:18:42.58:500,43,0	0/0:42,2:43:33.32:0,33,1572	0/0:36,4:40:33.30:0,33,1579	1/1:4,11:15:33.06:395,33,0	1/1:1,13:14:39.12:488,39,0	1/1:10,13:23:39.11:466,39,0	0/0:6,0:14:26.96:0,27,227	0/0:4,0:10:26.95:0,27,248	0/0:6,0:26:44.48:0,44,390	0/0:17,1:17:1.61:0,2,555	1/1:6,14:20:45.14:561,45,0	1/1:4,19:24:49.82:749,50,0	1/1:4,7:11:21.07:262,21,0
chr10	100570805	.	TACACACAC	T	733.70	PASS	AB=0.727;AC=13;AF=0.250;AN=52;BaseQRankSum=1.079;DP=412;FS=2.674;HRun=0;HaplotypeScore=103.7879;InbreedingCoeff=0.4943;MQ=66.83;MQ0=10;MQRankSum=-2.904;QD=8.95;ReadPosRankSum=1.364;VQSLOD=2.2435;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:30.10:0,30,730	0/0:2,0:4:3.48:0,3,66	./.	./.	0/0:6,0:7:2.99:0,3,24	1/1:8,4:12:6.02:150,6,0	0/0:13,0:13:0.46:0,0,1	1/1:21,0:20:2.66:51,3,0	0/0:11,0:11:9.03:0,9,304	0/0:11,0:11:12.04:0,12,435	0/0:10,0:10:5.31:0,5,156	0/0:12,0:13:12.50:0,13,296	0/0:7,0:7:6.02:0,6,182	0/0:12,0:12:15.05:0,15,334	0/0:21,0:21:15.05:0,15,472	1/1:3,9:12:7.84:223,8,0	0/0:16,0:25:23.65:0,24,781	0/0:22,0:22:30.09:0,30,778	0/0:8,0:8:3.01:0,3,44	1/1:4,1:4:2.98:21,3,0	0/0:17,0:16:0.89:0,1,2	0/0:6,0:7:3.01:0,3,105	0/0:4,0:8:2.68:0,3,103	0/0:20,0:37:32.78:0,33,951	0/0:10,0:12:27.09:0,27,956	0/1:10,6:15:99:153,0,108	1/1:7,0:7:3.01:75,3,0	1/1:6,3:9:9.03:206,9,0
chr10	100570969	.	AT	A	974.38	PASS	AB=0.688;AC=19;AF=0.339;AN=56;BaseQRankSum=8.720;DP=240;FS=3.788;HRun=2;HaplotypeScore=48.4976;InbreedingCoeff=0.7484;MQ=80.54;MQ0=4;MQRankSum=-5.371;QD=10.71;ReadPosRankSum=0.408;VQSLOD=1.6865;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:11.94:0,12,104	0/0:3,0:3:9.03:0,9,135	0/0:15,0:9:14.71:0,15,159	0/0:29,0:12:14.96:0,15,159	1/1:4,5:9:13.76:107,14,0	1/1:8,3:11:19.05:128,19,0	1/1:2,3:5:14.48:121,14,0	1/1:14,6:19:34.29:195,34,0	0/0:5,0:5:12.03:0,12,150	0/0:4,0:4:12.04:0,12,175	0/0:6,0:6:18.03:0,18,242	0/0:2,0:2:6.02:0,6,80	0/0:9,0:9:24.06:0,24,323	0/0:1,0:1:3.01:0,3,40	0/0:13,0:13:36.11:0,36,490	1/1:2,4:6:12.37:129,12,0	0/0:22,0:22:63.21:0,63,930	0/0:15,0:14:42.12:0,42,595	1/1:6,1:7:18.11:88,18,0	1/1:5,2:7:3.15:20,3,0	0/0:2,1:3:0.89:0,1,2	0/0:1,0:1:3.01:0,3,40	0/0:4,0:4:12.03:0,12,145	0/0:5,0:5:11.95:0,12,120	0/0:6,0:6:18.04:0,18,233	0/1:6,5:11:26.57:72,0,27	1/1:4,6:10:26.54:259,27,0	1/1:1,4:5:10.39:53,10,0
chr10	100570973	.	TA	T	890.97	PASS	AB=0.706;AC=19;AF=0.365;AN=52;BaseQRankSum=8.807;DP=222;FS=7.412;HRun=1;HaplotypeScore=52.1502;InbreedingCoeff=0.7719;MQ=83.84;MQ0=5;MQRankSum=-5.677;QD=11.14;ReadPosRankSum=0.151;VQSLOD=1.2459;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:9.01:0,9,89	0/0:3,0:3:9.03:0,9,144	0/0:13,0:7:8.97:0,9,104	0/0:35,0:14:18.63:0,19,217	1/1:2,5:7:14.02:118,14,0	1/1:8,3:11:20.65:144,21,0	1/1:1,3:4:11.62:111,12,0	1/1:9,6:15:31.55:128,32,0	0/0:4,0:4:9.03:0,9,134	0/0:3,0:3:9.03:0,9,144	0/0:6,0:6:18.05:0,18,266	0/0:3,0:3:6.02:0,6,76	0/0:7,0:7:21.07:0,21,315	./.	0/0:11,0:11:33.10:0,33,464	1/1:2,4:6:13.30:144,13,0	0/0:24,0:24:72.24:0,72,1109	0/0:14,0:13:39.13:0,39,623	1/1:6,1:7:18.81:99,19,0	1/1:4,2:6:5.22:26,5,0	0/0:1,1:2:3.41:0,3,19	./.	0/0:4,0:4:12.04:0,12,152	0/0:3,0:3:8.96:0,9,68	0/0:5,0:5:15.05:0,15,210	0/1:5,5:12:31.69:56,0,32	1/1:1,6:7:20.65:217,21,0	1/1:1,4:5:10.39:43,10,0
chr10	100570976	.	ATATATATATAG	A	1136.70	PASS	AB=0.910;AC=9;AF=0.180;AN=50;BaseQRankSum=4.451;DP=223;FS=3.045;HRun=0;HaplotypeScore=93.4258;InbreedingCoeff=0.1020;MQ=84.38;MQ0=5;MQRankSum=-3.803;QD=18.33;ReadPosRankSum=0.121;VQSLOD=2.3342;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:9.03:0,9,296	0/0:3,0:3:9.03:0,9,385	0/0:13,0:7:5.91:0,6,74	0/0:37,0:15:9.71:0,10,304	0/1:5,0:5:23.39:23,0,170	0/0:8,0:8:18.01:0,18,228	0/0:4,0:4:9.03:0,9,175	0/1:18,6:24:99:422,0,225	0/0:3,0:3:9.02:0,9,308	0/0:3,0:3:9.03:0,9,418	0/0:6,0:6:18.06:0,18,699	./.	0/0:7,0:7:15.05:0,15,714	./.	0/0:10,0:10:18.06:0,18,937	0/1:6,0:6:5.74:6,0,213	0/0:24,0:24:66.23:0,66,3373	0/0:14,0:13:39.13:0,39,1858	0/1:4,0:4:3.63:4,0,70	0/0:4,0:4:3.01:0,3,33	1/1:2,1:3:0.20:1,0,0	./.	0/0:3,0:3:3.01:0,3,66	0/0:1,0:1:3.01:0,3,122	0/0:5,0:5:9.02:0,9,363	0/1:10,5:15:99:494,0,169	0/0:9,0:9:24.07:0,24,387	1/1:1,4:5:12.04:306,12,0
chr10	100570981	.	TA	T	324.90	PASS	AB=0.926;AC=15;AF=0.288;AN=52;BaseQRankSum=8.537;DP=211;FS=0.619;HRun=1;HaplotypeScore=53.3217;InbreedingCoeff=0.4874;MQ=87.69;MQ0=5;MQRankSum=-6.043;QD=4.39;ReadPosRankSum=0.498;VQSLOD=0.2570;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:12.02:0,12,126	0/0:3,0:3:9.03:0,9,144	0/0:12,0:6:3.01:0,3,35	0/0:39,0:16:25.09:0,25,256	1/1:5,0:5:5.43:14,5,0	0/1:5,2:7:21.60:43,0,22	1/1:4,0:4:5.24:18,5,0	0/1:19,0:18:4.84:96,0,5	0/0:4,0:4:12.03:0,12,159	0/0:4,0:4:12.04:0,12,182	0/0:7,0:7:18.06:0,18,278	./.	0/0:5,0:5:15.05:0,15,240	0/0:1,0:1:3.01:0,3,37	0/0:7,0:7:21.06:0,21,312	1/1:6,1:7:15.60:49,16,0	0/0:22,0:22:66.22:0,66,1036	0/0:14,0:13:39.13:0,39,623	1/1:4,1:5:13.30:78,13,0	0/0:3,1:4:5.68:0,6,37	0/0:3,0:3:0.15:0,0,27	./.	0/0:1,0:1:3.01:0,3,38	0/0:1,0:1:3:0,3,26	0/0:5,0:5:15.04:0,15,198	0/1:14,0:14:27.15:83,0,27	1/1:8,0:8:8.71:54,9,0	1/1:5,0:5:12.08:53,12,0
chr10	100570984	.	ATAG	A	1302.04	PASS	AB=1.000;AC=21;AF=0.389;AN=54;BaseQRankSum=8.589;DP=219;FS=2.909;HRun=0;HaplotypeScore=58.2458;InbreedingCoeff=0.6138;MQ=86.94;MQ0=5;MQRankSum=-4.160;QD=10.59;ReadPosRankSum=-1.087;VQSLOD=2.9615;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:17.50:0,18,100	0/0:4,0:4:9.03:0,9,186	0/0:13,0:7:5.91:0,6,71	0/1:37,0:15:9.06:9,0,215	1/1:6,0:6:12:110,12,0	1/1:5,2:7:12.18:155,12,0	1/1:3,0:3:9:81,9,0	1/1:21,0:20:38.60:298,39,0	0/0:3,0:3:9.03:0,9,186	0/0:4,0:4:12.04:0,12,234	0/0:7,0:7:15.04:0,15,280	0/0:2,0:2:2.87:0,3,15	0/0:5,0:5:15.05:0,15,321	0/0:2,0:2:5.75:0,6,30	0/0:7,0:7:21.07:0,21,460	1/1:8,0:8:20.41:151,20,0	0/0:22,0:22:63.22:0,63,1409	0/0:14,0:13:33.11:0,33,761	1/1:4,1:5:14.67:127,15,0	1/1:3,1:4:1.33:10,1,0	0/1:3,0:3:3.43:7,0,3	./.	0/0:1,0:1:2.94:0,3,18	0/0:1,0:1:2.97:0,3,20	0/0:5,0:5:12.04:0,12,234	0/1:14,0:14:31.93:232,0,32	1/1:9,0:9:21.11:192,21,0	1/1:5,0:5:14.50:118,15,0
chr10	100571335	.	T	TC	5773.05	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-12.143;DP=600;FS=6.281;HRun=8;HaplotypeScore=61.9858;InbreedingCoeff=0.9916;MQ=81.72;MQ0=0;MQRankSum=-2.439;QD=24.16;ReadPosRankSum=-0.894;VQSLOD=5.3050;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:71.96:0,72,646	0/0:8,0:9:14.03:0,14,116	0/0:19,0:19:17.14:0,17,402	0/0:30,0:30:45.20:0,45,461	1/1:2,14:17:45:500,45,0	1/1:5,13:18:33.10:380,33,0	1/1:6,16:22:48.14:554,48,0	1/1:15,15:31:45.58:506,46,0	0/0:18,0:18:48.01:0,48,439	0/0:11,0:11:17.99:0,18,165	0/0:12,0:12:27:0,27,246	0/0:31,0:31:87:0,87,789	0/0:24,0:24:60.02:0,60,549	0/0:25,0:25:66:0,66,597	0/0:28,0:28:60.01:0,60,549	1/1:4,12:16:30.09:346,30,0	0/0:37,0:37:99:0,102,933	0/0:20,0:20:51.01:0,51,467	1/1:4,15:19:51.08:571,51,0	1/1:2,7:9:18.05:208,18,0	1/1:6,31:37:90.23:1025,90,0	0/0:16,0:16:39.01:0,39,357	0/0:8,0:8:18.01:0,18,165	0/0:25,0:25:60.01:0,60,549	0/0:11,0:11:24:0,24,220	1/1:7,18:25:51.15:589,51,0	1/1:5,20:26:32.54:610,33,0	1/1:2,17:19:42.12:485,42,0
chr10	100571726	.	G	GTA	2175.66	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-8.779;DP=542;FS=4.495;HRun=0;HaplotypeScore=63.0671;InbreedingCoeff=0.9198;MQ=62.62;MQ0=5;MQRankSum=-0.761;QD=29.40;ReadPosRankSum=1.896;VQSLOD=5.1707;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:31:53.16:817,53,0	0/0:14,0:14:33.09:0,33,398	0/0:14,0:6:8.96:0,9,92	0/0:18,0:9:6.76:0,7,62	0/0:28,0:29:75.07:0,75,909	0/0:29,0:29:78.25:0,78,974	0/0:13,0:13:30.09:0,30,374	0/0:43,0:43:93.28:0,93,1139	0/0:16,0:16:36.10:0,36,436	0/0:31,0:31:75.22:0,75,918	0/0:25,1:26:72.23:0,72,898	1/1:1,14:15:36.12:594,36,0	0/0:15,0:15:36.11:0,36,439	1/1:1,8:9:21.07:347,21,0	0/0:25,0:25:66.17:0,66,787	0/0:19,0:19:48.12:0,48,574	0/0:13,0:13:33.10:0,33,410	0/0:14,0:14:39.10:0,39,471	0/0:13,0:13:27.09:0,27,337	0/0:33,0:33:78.23:0,78,961	0/0:19,0:19:45.11:0,45,535	1/1:0,3:3:3.01:50,3,0	1/1:0,10:10:24.08:396,24,0	1/1:1,4:5:9.03:149,9,0	0/0:23,0:22:60.17:0,60,735	0/0:24,0:24:66.19:0,66,802	0/0:27,0:27:72.21:0,72,884	0/0:10,0:10:30.10:0,30,374
chr10	100572429	.	G	GA	3751.64	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-0.037;DP=768;FS=0.764;HRun=9;HaplotypeScore=97.3602;InbreedingCoeff=0.9725;MQ=70.13;MQ0=2;MQRankSum=-0.690;QD=23.90;ReadPosRankSum=3.146;VQSLOD=3.8284;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:33:78.04:844,78,0	0/0:10,0:10:26.98:0,27,231	0/0:35,0:24:10.07:0,10,142	0/0:21,0:13:14.79:0,15,122	0/0:37,0:37:89.95:0,90,781	0/0:19,1:20:8.79:0,9,305	0/0:19,1:20:17.78:0,18,380	0/0:30,1:31:44.79:0,45,618	0/0:23,0:23:59.98:0,60,521	0/0:29,0:29:68.97:0,69,597	0/0:27,0:27:74.97:0,75,648	1/1:4,23:27:54.15:597,54,0	0/0:40,0:40:99:0,102,885	1/1:4,27:31:66.18:730,66,0	0/0:38,1:39:68.77:0,69,821	0/0:31,0:31:80.98:0,81,703	0/0:25,0:26:68:0,68,574	0/0:20,0:20:56.99:0,57,494	0/0:32,0:32:71.93:0,72,612	0/0:40,0:40:99:0,102,885	0/0:22,0:22:53.97:0,54,468	1/1:3,15:18:45.12:498,45,0	1/1:7,15:23:21.91:453,22,0	1/1:3,22:25:57.15:631,57,0	0/0:19,0:19:50.98:0,51,443	0/0:39,1:40:68.79:0,69,823	0/0:33,0:33:68.75:0,69,586	0/0:16,0:16:47.99:0,48,417
chr10	100573077	.	G	GGA	12938.55	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-0.368;DP=699;FS=0.607;HRun=0;HaplotypeScore=86.8557;InbreedingCoeff=0.9976;MQ=87.82;MQ0=1;MQRankSum=-1.858;QD=43.71;ReadPosRankSum=-0.772;VQSLOD=5.9953;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1595	0/0:5,0:5:15.05:0,15,205	0/0:27,0:27:71.71:0,72,913	0/0:25,0:25:53.73:0,54,644	1/1:2,21:23:57.20:1011,57,0	1/1:4,30:35:81.28:1437,81,0	1/1:8,31:39:81.28:1437,81,0	1/1:2,21:24:66.18:1102,66,0	0/0:19,0:19:57.18:0,57,765	0/0:23,0:23:57.18:0,57,766	0/0:30,0:30:90.30:0,90,1237	0/0:23,0:23:69.22:0,69,933	0/0:21,0:21:60.19:0,60,809	0/0:21,0:21:63.21:0,63,866	0/0:37,0:37:99:0,105,1441	1/1:2,24:26:72.25:1278,72,0	0/0:28,0:28:84.28:0,84,1153	0/0:13,0:13:39.13:0,39,536	1/1:3,12:16:39.12:663,39,0	1/1:2,22:25:63.22:1117,63,0	1/1:4,22:26:60.21:1065,60,0	0/0:23,0:23:69.22:0,69,932	0/0:22,0:22:66.21:0,66,889	0/0:25,0:25:69.23:0,69,948	0/0:19,0:19:48.16:0,48,658	1/1:3,29:32:90.29:1564,90,0	1/1:2,38:39:99:1787,102,0	1/1:0,9:9:27.09:479,27,0
chr10	100573631	.	C	CT	1016.69	PASS	AB=0.985;AC=11;AF=0.196;AN=56;BaseQRankSum=17.538;DP=612;FS=3.338;HRun=1;HaplotypeScore=150.8150;InbreedingCoeff=0.0386;MQ=68.05;MQ0=1;MQRankSum=-4.181;QD=4.02;ReadPosRankSum=4.281;VQSLOD=0.6524;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:70.58:0,71,505	0/0:11,0:11:33.04:0,33,353	0/0:20,0:17:35.63:0,36,441	0/0:18,0:17:29.90:0,30,295	0/1:28,1:29:66.81:132,0,67	0/1:42,0:42:82.95:216,0,83	0/1:16,1:17:65.34:65,0,94	0/0:28,0:28:5.48:0,5,299	0/0:23,0:23:63.11:0,63,751	0/0:19,0:19:54.07:0,54,584	0/0:10,0:10:27.06:0,27,320	0/0:20,0:20:56.69:0,57,426	0/0:10,0:10:27.01:0,27,285	0/0:27,0:27:71.41:0,71,539	0/0:30,0:30:87.17:0,87,1031	0/1:24,0:24:90.57:91,0,92	0/0:23,0:23:63.05:0,63,727	0/0:14,0:14:41.90:0,42,407	0/1:18,1:19:89.73:188,0,90	1/1:23,1:24:15.27:150,15,0	0/1:21,0:21:38.64:39,0,114	0/0:16,0:16:41.81:0,42,321	0/0:18,0:17:44.75:0,45,337	0/0:22,0:22:56.73:0,57,432	0/0:24,0:24:62.83:0,63,710	0/1:32,0:32:60.84:114,0,61	0/1:36,0:36:36.81:146,0,37	0/1:9,0:9:1.60:29,0,2
chr10	100573632	.	TC	T	2439.72	PASS	AB=0.888;AC=14;AF=0.250;AN=56;BaseQRankSum=-8.193;DP=606;FS=0.822;HRun=10;HaplotypeScore=141.0065;InbreedingCoeff=0.7179;MQ=69.55;MQ0=1;MQRankSum=3.526;QD=16.37;ReadPosRankSum=3.668;VQSLOD=2.6354;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:68.97:594,69,0	0/0:10,1:11:0.99:0,1,222	0/0:23,0:19:21.57:0,22,327	0/0:18,1:18:34.32:0,34,251	0/0:28,0:28:64.12:0,64,290	0/0:41,0:41:93.04:0,93,447	0/0:17,0:17:31.16:0,31,143	0/0:31,0:31:62.42:0,62,269	0/0:22,0:22:57.08:0,57,607	0/0:18,1:19:7.03:0,7,299	0/0:9,0:9:21.06:0,21,232	1/1:2,18:20:50.98:442,51,0	0/1:8,1:9:1.87:2,0,192	1/1:4,23:26:65.81:572,66,0	0/0:26,3:29:0.19:0,0,685	0/0:23,0:23:55.85:0,56,278	0/0:22,1:23:28.09:0,28,530	0/1:12,2:14:23.48:23,0,208	0/0:19,0:19:38.15:0,38,199	0/0:24,0:24:62.29:0,62,332	0/0:21,0:21:38.73:0,39,175	1/1:3,12:15:29.99:260,30,0	1/1:1,17:17:41.99:364,42,0	1/1:5,17:22:41.97:364,42,0	0/0:21,2:23:1.96:0,2,456	0/0:30,0:30:71.25:0,71,358	0/0:36,0:36:84.75:0,85,403	0/0:9,0:9:23.03:0,23,101
chr10	100573634	.	C	CTT	11134.17	PASS	AB=0.572;AC=20;AF=0.357;AN=56;BaseQRankSum=6.984;DP=616;FS=1.346;HRun=0;HaplotypeScore=128.8261;InbreedingCoeff=0.8719;MQ=70.81;MQ0=1;MQRankSum=-5.244;QD=39.62;ReadPosRankSum=1.264;VQSLOD=6.5997;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:70.65:0,71,648	0/0:10,0:10:30.09:0,30,462	0/0:25,0:20:57.16:0,57,826	0/0:21,0:20:40.38:0,40,453	1/1:7,21:28:75.08:1140,75,0	1/1:9,32:41:99:1699,110,0	1/1:6,10:16:47.65:725,48,0	1/1:15,18:33:10.88:1285,11,0	0/0:22,0:22:66.22:0,66,1058	0/0:19,0:19:54.16:0,54,797	0/0:9,0:9:24.08:0,24,388	0/0:19,0:19:54.04:0,54,503	0/0:9,0:9:27.08:0,27,412	0/0:27,0:26:72.05:0,72,682	0/0:28,0:28:84.26:0,84,1299	1/1:8,15:23:38.13:1024,38,0	0/0:23,0:23:63.21:0,63,986	0/0:14,0:14:39.11:0,39,560	1/1:14,5:19:30.44:604,30,0	0/1:7,18:26:1.76:761,0,2	1/1:5,15:20:54.14:844,54,0	0/0:15,0:15:17.67:0,18,377	0/0:19,0:18:44.22:0,44,404	0/0:24,0:24:63.07:0,63,656	0/0:23,0:23:66.20:0,66,994	0/1:7,23:30:13.63:1166,0,14	1/1:5,30:36:49.06:1447,49,0	1/1:0,9:9:27.09:439,27,0
chr10	100573641	.	C	CCT	7530.17	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=13.300;DP=610;FS=0.335;HRun=0;HaplotypeScore=141.1636;InbreedingCoeff=0.9973;MQ=73.59;MQ0=1;MQRankSum=-5.070;QD=27.79;ReadPosRankSum=2.241;VQSLOD=5.8594;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:91.23:0,91,657	0/0:10,0:10:24.04:0,24,286	0/0:25,0:20:44.76:0,45,480	0/0:25,0:24:24.17:0,24,325	1/1:11,17:28:60.03:817,60,0	1/1:10,27:38:91.57:1251,92,0	1/1:9,8:17:31.88:357,32,0	1/1:25,8:33:50.70:560,51,0	0/0:20,0:20:51.15:0,51,637	0/0:21,0:21:45.06:0,45,496	0/0:10,0:10:23.10:0,23,264	0/0:19,0:19:44.64:0,45,311	0/0:11,0:11:21:0,21,236	0/0:25,0:25:62.49:0,62,436	0/0:28,0:28:78.14:0,78,925	1/1:7,14:21:45.10:653,45,0	0/0:20,0:20:57.08:0,57,659	0/0:14,0:14:35.70:0,36,374	1/1:10,3:13:19.86:179,20,0	1/1:10,16:28:61.30:745,61,0	1/1:8,11:19:36.05:485,36,0	0/0:14,0:14:35.74:0,36,254	0/0:19,0:18:47.62:0,48,336	0/0:20,0:20:47.66:0,48,343	0/0:26,0:26:59.79:0,60,645	1/1:8,21:29:40.01:977,40,0	1/1:10,25:36:87.19:1183,87,0	1/1:2,6:9:24.06:322,24,0
chr10	100573686	.	GTTTGT	G	5599.72	PASS	AB=0.742;AC=22;AF=0.393;AN=56;BaseQRankSum=11.723;DP=588;FS=8.909;HRun=0;HaplotypeScore=144.9122;InbreedingCoeff=0.8129;MQ=69.45;MQ0=3;MQRankSum=-4.675;QD=23.73;ReadPosRankSum=-2.303;VQSLOD=3.8295;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:84.21:0,84,2171	0/1:3,1:4:46.43:46,0,139	0/0:30,0:23:24.08:0,24,479	0/0:24,0:16:12.51:0,13,170	1/1:11,9:20:18.06:307,18,0	1/1:12,15:27:45.15:832,45,0	1/1:6,14:20:27.09:495,27,0	1/1:13,11:24:33.06:487,33,0	0/0:17,0:17:39.13:0,39,1091	0/0:26,0:26:48.16:0,48,1244	0/0:11,0:11:27.09:0,27,746	0/0:23,0:23:51.18:0,51,1447	0/0:11,0:11:27.09:0,27,770	0/0:15,0:15:24.08:0,24,640	0/0:32,0:32:60.19:0,60,1570	1/1:7,14:21:33.11:610,33,0	0/0:29,0:29:69.24:0,69,1820	0/0:17,0:17:45.15:0,45,1141	1/1:8,10:18:30.06:460,30,0	1/1:14,15:29:42.14:769,42,0	1/1:5,5:10:12.04:199,12,0	0/0:13,0:13:21.07:0,21,598	0/0:20,0:20:51.16:0,51,1279	0/0:27,0:27:63.22:0,63,1677	0/0:19,0:19:39.13:0,39,1068	0/1:14,12:26:99:674,0,126	1/1:14,18:32:36.12:666,36,0	1/1:4,1:5:3.01:55,3,0
chr10	100574659	.	T	TTTTC	12683	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=5.017;DP=593;FS=17.464;HRun=0;HaplotypeScore=96.1482;InbreedingCoeff=0.9842;MQ=68.08;MQ0=0;MQRankSum=-5.515;QD=46.46;ReadPosRankSum=-1.962;VQSLOD=3.5244;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:46.39:0,46,1010	0/0:8,0:8:15.05:0,15,260	0/0:17,0:17:17.65:0,18,465	0/0:13,0:12:18.03:0,18,246	1/1:5,20:27:48.16:1139,48,0	1/1:7,19:27:42.14:1048,42,0	1/1:3,15:18:39.13:950,39,0	1/1:14,15:32:64.37:1268,64,0	0/0:19,0:19:54.16:0,54,874	0/0:23,0:23:60.19:0,60,1000	0/0:22,0:22:54.18:0,54,935	0/0:18,0:18:45.15:0,45,777	0/0:18,0:18:45.14:0,45,725	0/0:21,0:21:57.14:0,57,925	0/0:29,0:29:75.24:0,75,1244	1/1:3,21:25:45.15:1121,45,0	0/0:30,0:30:81.28:0,81,1395	0/0:16,0:16:39.12:0,39,647	1/1:14,11:28:54.02:939,54,0	1/1:2,23:25:66.16:1536,66,0	1/1:2,10:13:21:449,21,0	0/0:16,0:16:45.15:0,45,751	0/0:17,0:17:51.16:0,51,829	0/0:13,0:13:36.12:0,36,617	0/0:17,0:17:42.14:0,42,698	1/1:4,19:23:7.93:1188,8,0	1/1:7,31:38:93.32:2236,93,0	1/1:1,15:16:33.11:808,33,0
chr10	100574874	.	A	AT	5752.23	PASS	AB=0.967;AC=35;AF=0.625;AN=56;BaseQRankSum=-2.115;DP=549;FS=4.133;HRun=9;HaplotypeScore=64.4054;InbreedingCoeff=0.8720;MQ=67.49;MQ0=4;MQRankSum=0.854;QD=15.38;ReadPosRankSum=-1.630;VQSLOD=4.7574;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:30:40.80:251,41,0	0/0:9,0:9:17.98:0,18,156	0/1:28,1:10:14.63:15,0,97	0/0:18,0:8:1.99:0,2,40	1/1:2,15:18:41.91:432,42,0	1/1:1,12:13:30.08:332,30,0	1/1:3,12:15:36.56:392,37,0	1/1:10,21:31:60.16:664,60,0	0/0:19,0:19:24.48:0,24,367	0/0:15,0:15:29.98:0,30,260	0/0:22,0:22:56.98:0,57,495	1/1:6,0:20:31.42:159,31,0	0/0:17,0:18:38.01:0,38,318	1/1:7,0:21:5.43:118,5,0	0/0:23,0:23:62.99:0,63,547	1/1:5,17:22:26.72:298,27,0	0/0:15,0:15:35.99:0,36,312	0/0:17,0:17:44.95:0,45,383	1/1:9,11:21:12.88:347,13,0	1/1:5,7:12:21.06:232,21,0	1/1:1,12:14:32.92:346,33,0	1/1:1,0:12:28.78:151,29,0	1/1:10,0:22:28.61:145,29,0	1/1:5,0:19:34.50:178,34,0	0/0:19,0:19:50.99:0,51,443	1/1:6,22:29:40.11:664,40,0	1/1:2,29:31:75:829,75,0	1/1:1,13:14:18.05:199,18,0
chr10	100577048	.	ACTTT	A	4118	PASS	AB=0.810;AC=29;AF=0.558;AN=52;BaseQRankSum=10.147;DP=507;FS=11.968;HRun=0;HaplotypeScore=81.7982;InbreedingCoeff=0.6707;MQ=70.60;MQ0=3;MQRankSum=1.406;QD=13.68;ReadPosRankSum=-1.094;VQSLOD=2.0378;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,14:25:24.05:357,24,0	0/0:6,0:6:12.04:0,12,278	./.	./.	1/1:13,14:27:33.08:478,33,0	1/1:7,6:13:15.05:228,15,0	1/1:12,4:16:9.03:137,9,0	0/0:40,0:38:1.25:0,1,3	1/1:10,3:13:12.04:183,12,0	0/1:19,1:20:12.59:13,0,663	0/0:24,0:24:36.08:0,36,725	0/0:12,0:12:24.07:0,24,512	0/1:10,7:17:99:358,0,129	0/0:16,0:16:15.03:0,15,302	1/1:11,10:21:18.06:274,18,0	1/1:11,4:15:12.04:183,12,0	0/0:19,0:19:24.08:0,24,531	1/1:16,8:24:21.07:320,21,0	1/1:10,5:14:15.05:228,15,0	1/1:17,6:23:15.02:204,15,0	0/0:6,0:6:3.01:0,3,69	0/0:18,0:18:21.07:0,21,428	0/0:27,0:27:33.11:0,33,705	0/0:15,0:15:21.07:0,21,474	1/1:10,10:20:27.09:411,27,0	0/1:14,6:20:88.59:242,0,89	1/1:14,9:23:24.08:366,24,0	1/1:5,4:9:9.03:137,9,0
chr10	100577275	.	T	TGGG	1460.19	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=2.276;DP=370;FS=2.244;HRun=12;HaplotypeScore=94.9244;InbreedingCoeff=0.6333;MQ=78.40;MQ0=1;MQRankSum=-1.236;QD=5.66;ReadPosRankSum=1.159;VQSLOD=-0.3200;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:5.75:51,6,0	0/0:2,0:2:2.98:0,3,33	0/1:24,0:18:7.06:7,0,112	0/0:17,0:15:9.58:0,10,90	1/1:15,0:15:2.30:51,2,0	1/1:17,0:17:13.09:51,13,0	1/1:19,0:20:23.62:104,24,0	0/1:8,0:8:4.38:25,0,4	0/0:10,0:11:16.21:0,16,183	0/1:8,0:8:0:0,0,0	0/0:15,0:16:14.72:0,15,151	1/1:14,0:14:11.74:123,12,0	0/0:14,0:15:20.42:0,20,182	1/1:5,3:10:2.68:11,3,0	0/0:13,0:13:11.77:0,12,101	1/1:15,0:16:28.39:118,28,0	0/0:21,0:21:32.76:0,33,369	0/0:7,0:7:2.87:0,3,33	1/1:13,0:13:32.94:267,33,0	1/1:16,0:17:17.97:121,18,0	1/1:15,0:15:15.61:70,16,0	1/1:10,2:13:3.01:54,3,0	1/1:11,0:11:14.72:171,15,0	1/1:21,2:23:15.05:251,15,0	0/0:9,0:10:11.87:0,12,118	1/1:6,0:7:2.69:47,3,0	1/1:17,0:18:23.85:102,24,0	1/1:2,0:2:5.49:23,5,0
chr10	100577285	.	G	GGGC	3015.28	PASS	AB=0.563;AC=33;AF=0.589;AN=56;BaseQRankSum=0.297;DP=329;FS=5.418;HRun=0;HaplotypeScore=56.6067;InbreedingCoeff=0.8567;MQ=80.47;MQ0=1;MQRankSum=0.717;QD=14.50;ReadPosRankSum=3.048;VQSLOD=2.3580;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,7:13:6.01:80,6,0	0/0:3,0:3:9:0,9,76	0/0:22,0:16:30.98:0,31,291	0/0:13,0:12:17.21:0,17,182	1/1:1,0:8:17.10:134,17,0	1/1:0,0:11:14.98:127,15,0	1/1:2,0:18:29.48:244,29,0	1/1:2,0:12:26.11:192,26,0	0/0:11,0:11:23.97:0,24,274	0/0:8,0:8:5.90:0,6,47	0/0:13,0:13:33:0,33,350	1/1:1,7:12:12.03:180,12,0	0/0:13,0:13:35.37:0,35,342	1/1:8,0:9:14.76:107,15,0	0/0:9,0:9:17.94:0,18,178	1/1:2,0:17:32.99:288,33,0	0/0:19,0:19:54.10:0,54,662	0/0:4,0:4:11.99:0,12,116	1/1:4,1:17:30.35:398,30,0	1/1:4,0:16:26.47:226,26,0	1/1:2,0:13:18.01:164,18,0	1/1:8,1:9:13.77:123,14,0	1/1:1,2:6:15.04:242,15,0	1/1:3,16:21:18.06:347,18,0	0/0:6,0:6:15.03:0,15,185	0/1:2,0:9:7.35:89,0,7	1/1:1,0:15:27:238,27,0	1/1:0,0:2:6:53,6,0
chr10	100577422	.	GAC	G	5001.23	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-9.171;DP=508;FS=1.499;HRun=0;HaplotypeScore=86.3453;InbreedingCoeff=-0.1599;MQ=65.20;MQ0=8;MQRankSum=1.059;QD=9.84;ReadPosRankSum=0.537;VQSLOD=4.0446;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:25:22.54:190,23,0	1/1:2,0:2:6.01:70,6,0	1/1:34,0:17:2.66:247,3,0	0/1:54,0:16:19.91:152,0,20	1/1:14,0:14:14.96:121,15,0	0/1:22,0:21:11.60:237,0,12	0/1:20,0:20:8.17:238,0,8	1/1:37,0:37:31.60:635,32,0	1/1:15,0:15:38.92:332,39,0	1/1:0,10:10:27.22:199,27,0	1/1:15,0:15:20.75:187,21,0	1/1:15,0:15:2.84:44,3,0	1/1:1,16:17:2.87:46,3,0	1/1:9,0:9:11.79:112,12,0	1/1:0,11:11:3.01:46,3,0	1/1:19,0:19:14.60:190,15,0	1/1:5,23:28:23.57:343,24,0	1/1:1,7:8:4.26:48,4,0	1/1:10,0:10:23.78:196,24,0	1/1:19,0:19:4.50:172,5,0	0/1:18,0:18:58.50:109,0,59	1/1:18,0:18:23.12:162,23,0	1/1:16,0:15:20.97:174,21,0	1/1:18,0:18:12.98:115,13,0	1/1:9,0:9:23.98:202,24,0	1/1:15,0:15:6.85:223,7,0	0/1:14,0:14:23.87:106,0,24	1/1:15,0:15:0.99:104,1,0
chr10	100577672	.	CAGAGAGAGAGAGAGAGAGAG	C	633.48	PASS	AB=0.976;AC=6;AF=0.115;AN=52;BaseQRankSum=3.108;DP=516;FS=3.624;HRun=0;HaplotypeScore=232.7817;InbreedingCoeff=0.4097;MQ=67.34;MQ0=13;MQRankSum=-3.826;QD=7.37;ReadPosRankSum=-1.401;VQSLOD=2.6198;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,1:23:3.01:0,3,37	0/0:9,0:9:6.91:0,7,267	0/1:38,0:19:0:0,0,0	0/0:52,0:21:2.80:0,3,40	0/0:14,0:14:9.50:0,10,641	0/0:19,0:19:17.24:0,17,1051	0/0:21,0:21:12.04:0,12,840	0/0:26,0:26:30.10:0,30,1508	0/0:12,0:12:12.04:0,12,901	0/0:12,0:12:18.06:0,18,1029	0/0:13,0:13:3.01:0,3,174	0/1:19,0:20:98.31:123,0,98	0/0:14,0:14:11.25:0,11,573	1/1:8,2:11:9.03:459,9,0	0/0:23,0:23:33.10:0,33,2045	0/0:17,0:16:7.67:0,8,495	0/0:25,0:25:35.40:0,35,2687	0/0:10,0:10:23.99:0,24,1194	0/0:12,0:12:18.06:0,18,1148	0/0:13,0:13:9.03:0,9,309	0/0:16,0:16:15.99:0,16,880	./.	1/1:16,1:17:3.01:160,3,0	./.	0/0:10,0:9:6.02:0,6,477	0/0:21,0:21:30.10:0,30,2107	0/0:20,0:20:23.61:0,24,1892	0/0:10,0:9:21.07:0,21,1296
chr10	100577684	.	G	GAA	2105.79	PASS	AB=0.839;AC=17;AF=0.304;AN=56;BaseQRankSum=0.323;DP=464;FS=1.617;HRun=1;HaplotypeScore=80.6264;InbreedingCoeff=0.4390;MQ=55.27;MQ0=20;MQRankSum=-0.919;QD=12.24;ReadPosRankSum=0.565;VQSLOD=0.5628;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:47.73:0,48,369	0/0:8,0:8:11.35:0,11,81	0/0:34,0:14:25.43:0,25,204	0/0:48,0:14:16.85:0,17,180	1/1:12,0:13:23.88:192,24,0	1/1:20,0:19:4.12:233,4,0	0/1:5,11:16:27.28:27,0,32	0/1:25,0:25:26.80:393,0,27	0/0:10,0:10:20.91:0,21,165	0/0:10,0:10:29.88:0,30,246	0/0:11,0:11:5.99:0,6,50	0/0:16,0:16:44.82:0,45,355	0/0:13,0:12:22.85:0,23,171	0/0:11,0:11:29.66:0,30,215	0/0:18,0:18:53.90:0,54,457	1/1:13,0:12:2.04:162,2,0	0/0:26,0:25:51.67:0,52,438	0/0:11,0:11:28.84:0,29,205	1/1:11,0:11:14.36:242,14,0	0/1:13,0:12:37.99:111,0,38	1/1:15,0:15:26.78:255,27,0	0/0:4,0:3:3:0,3,25	0/0:12,0:12:14.91:0,15,116	0/0:29,0:28:17.97:0,18,148	0/0:8,0:7:5.99:0,6,50	0/1:6,12:18:66.33:274,0,66	1/1:20,0:20:10.48:284,10,0	0/1:8,0:7:22.57:113,0,23
chr10	100578026	.	CA	C	5701.01	PASS	AB=0.985;AC=48;AF=0.857;AN=56;BaseQRankSum=9.737;DP=575;FS=1.742;HRun=1;HaplotypeScore=215.9522;InbreedingCoeff=0.2902;MQ=77.50;MQ0=0;MQRankSum=-7.739;QD=10.68;ReadPosRankSum=10.539;VQSLOD=2.0264;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:19.45:176,19,0	1/1:8,0:8:2.79:82,3,0	0/0:18,0:17:13.29:0,13,265	0/0:23,0:22:3.58:0,4,366	1/1:31,0:31:43.07:318,43,0	1/1:29,0:29:82.62:428,83,0	1/1:15,0:14:9.71:102,10,0	1/1:23,1:24:5.51:192,6,0	1/1:27,0:27:28.79:293,29,0	1/1:17,1:18:22.07:199,22,0	1/1:19,1:20:24.89:240,25,0	1/1:18,0:18:51.05:268,51,0	1/1:29,0:29:52.49:352,52,0	1/1:20,1:21:23.45:244,23,0	1/1:29,0:29:74.58:378,75,0	1/1:20,1:21:34.35:260,34,0	0/1:15,1:16:15.23:119,0,15	0/1:13,0:12:4.71:121,0,5	1/1:22,0:21:22.14:194,22,0	0/1:21,0:21:25.49:180,0,25	1/1:19,0:19:0.60:91,1,0	1/1:20,0:20:21.66:186,22,0	1/1:23,1:24:21.54:292,22,0	1/1:12,1:13:15.96:70,16,0	1/1:26,1:27:39.07:276,39,0	1/1:21,0:21:42:266,42,0	0/1:22,0:22:5.28:234,0,5	1/1:9,0:9:25.36:138,25,0
chr10	100578676	.	AGGG	A	6643.46	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=1.426;DP=485;FS=4.524;HRun=12;HaplotypeScore=93.5669;InbreedingCoeff=0.9331;MQ=80.57;MQ0=1;MQRankSum=-3.765;QD=20.89;ReadPosRankSum=7.613;VQSLOD=3.3531;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:35:70.58:431,71,0	0/0:5,0:5:3.01:0,3,44	0/0:35,0:27:5.89:0,6,640	0/0:18,0:16:23.71:0,24,308	1/1:3,21:24:51.11:641,51,0	1/1:1,10:12:21.95:268,22,0	1/1:6,10:17:31.74:412,32,0	1/1:14,6:20:20.93:249,21,0	0/0:10,0:11:12.02:0,12,199	0/0:6,0:8:9.44:0,9,103	0/0:10,0:10:14.71:0,15,226	1/1:4,0:27:61.75:377,62,0	0/0:6,0:8:12:0,12,133	1/1:3,0:16:29.39:180,29,0	0/0:9,0:20:27.81:0,28,233	1/1:4,18:23:55.81:717,56,0	0/0:25,0:25:44.93:0,45,849	0/0:11,0:11:24.08:0,24,436	1/1:6,12:19:41.99:479,42,0	1/1:3,14:18:45.13:560,45,0	1/1:4,14:20:38.98:452,39,0	1/1:3,0:15:32.35:198,32,0	1/1:0,0:11:29.42:180,29,0	1/1:2,0:16:38.24:234,38,0	0/0:14,0:14:12.02:0,12,193	1/1:5,14:19:41.97:509,42,0	1/1:3,12:15:33.06:417,33,0	1/1:2,9:11:27.08:340,27,0
chr10	100578686	.	GGGT	G	1685.17	PASS	AB=0.978;AC=16;AF=0.286;AN=56;BaseQRankSum=5.061;DP=472;FS=28.443;HRun=0;HaplotypeScore=107.3461;InbreedingCoeff=0.1318;MQ=78.59;MQ0=1;MQRankSum=-4.845;QD=6.85;ReadPosRankSum=8.091;VQSLOD=0.4597;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:5.13:5,0,113	0/0:3,0:3:6:0,6,78	0/0:36,0:28:40.85:0,41,817	0/0:17,0:15:25.37:0,25,381	0/1:24,0:24:36.38:258,0,36	0/1:15,0:15:51.42:69,0,51	1/1:12,2:14:2.37:199,2,0	0/1:18,0:18:48.56:49,0,207	0/0:10,0:10:17.98:0,18,285	0/0:7,0:8:18.28:0,18,187	0/0:12,0:12:23.72:0,24,329	0/0:26,0:26:18.12:0,18,111	0/0:10,0:10:26.98:0,27,303	0/0:15,0:15:5.90:0,6,61	0/0:18,0:18:35.32:0,35,366	1/1:19,1:20:45.93:313,46,0	0/0:24,0:24:56.61:0,57,1135	0/0:11,0:11:30.07:0,30,557	0/1:15,2:17:2.34:169,0,2	0/1:22,1:23:84.45:219,0,84	1/1:17,1:18:5.64:152,6,0	0/0:13,0:13:8.36:0,8,47	0/1:11,0:11:0.98:1,0,7	0/0:17,0:17:17.13:0,17,71	0/0:6,0:6:17.98:0,18,249	0/1:19,0:19:85.01:152,0,85	0/1:17,0:17:63.12:127,0,63	0/1:11,1:12:6.96:131,0,7
chr10	100578943	.	GA	G	4457.99	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=11.649;DP=474;FS=2.681;HRun=9;HaplotypeScore=46.3812;InbreedingCoeff=0.9868;MQ=74.46;MQ0=0;MQRankSum=-1.348;QD=22.98;ReadPosRankSum=-0.192;VQSLOD=5.4449;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.14:0,54,611	0/0:7,0:7:18.05:0,18,208	0/0:10,0:10:21.05:0,21,230	0/0:9,0:9:8.92:0,9,86	1/1:0,18:18:54.03:494,54,0	1/1:0,19:19:45.02:412,45,0	1/1:0,17:17:45.02:412,45,0	1/1:7,20:27:19.40:487,19,0	0/0:19,0:19:54.16:0,54,623	0/0:25,0:24:69.21:0,69,796	0/0:24,0:24:57.17:0,57,655	0/0:14,0:14:42.11:0,42,475	0/0:14,0:14:30.09:0,30,346	0/0:9,0:9:24.07:0,24,277	0/0:17,0:17:48.13:0,48,544	1/1:2,15:17:42.01:384,42,0	0/0:27,0:27:72.21:0,72,831	0/0:26,0:26:69.21:0,69,796	1/1:2,21:23:63.03:577,63,0	1/1:0,14:14:42.02:384,42,0	1/1:0,8:8:18.01:165,18,0	0/0:14,0:14:39.12:0,39,450	0/0:14,0:14:39.10:0,39,438	0/0:14,0:14:39.07:0,39,435	0/0:18,0:18:51.15:0,51,588	1/1:5,18:23:22.41:459,22,0	1/1:2,16:18:47.71:438,48,0	1/1:1,9:10:27.01:247,27,0
chr10	100580361	.	GA	G	1064.47	PASS	AB=0.628;AC=41;AF=0.788;AN=52;BaseQRankSum=5.248;DP=179;FS=4.452;HRun=2;HaplotypeScore=153.5615;InbreedingCoeff=-0.0200;MQ=60.82;MQ0=0;MQRankSum=-0.295;QD=6.05;ReadPosRankSum=3.468;VQSLOD=1.0260;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:1,1:2:0.05:0,0,1	0/0:0,1:1:0.47:0,0,1	1/1:3,0:3:3.47:28,3,0	0/1:5,1:6:21.96:22,0,24	1/1:5,5:10:11.63:55,12,0	1/1:1,11:12:26.15:121,26,0	1/1:1,9:10:22.54:101,23,0	0/1:9,8:17:56.95:57,0,116	1/1:1,5:6:12.54:56,13,0	0/1:2,8:10:8.23:94,0,8	0/1:0,5:5:6.48:6,0,10	1/1:0,7:7:12.22:61,12,0	1/1:1,4:5:5.19:29,5,0	1/1:0,6:6:14.24:57,14,0	1/1:0,5:5:9.50:41,9,0	1/1:1,10:11:18.69:81,19,0	1/1:1,6:7:9.64:42,10,0	1/1:0,2:2:3.81:19,4,0	1/1:3,4:7:1.70:53,2,0	1/1:3,1:4:3.40:15,3,0	./.	1/1:1,0:1:0.47:1,0,0	1/1:2,2:4:3.49:12,3,0	./.	1/1:3,4:7:10.90:45,11,0	0/1:1,6:7:0.25:58,0,0	0/1:9,8:17:11.77:75,0,12	0/1:2,5:7:16.39:51,0,16
chr10	100580364	.	TA	T	1775.75	PASS	AB=0.666;AC=47;AF=0.904;AN=52;BaseQRankSum=5.528;DP=176;FS=5.632;HRun=2;HaplotypeScore=149.3308;InbreedingCoeff=-0.0572;MQ=54.96;MQ0=0;MQRankSum=-1.214;QD=10.09;ReadPosRankSum=3.613;VQSLOD=1.8979;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,1:2:2.44:6,2,0	1/1:0,1:1:2.04:6,2,0	1/1:2,0:2:2.97:20,3,0	0/1:4,1:5:22.26:22,0,31	1/1:5,5:10:16.57:92,17,0	1/1:1,11:12:31.75:190,32,0	1/1:1,9:10:24.46:153,24,0	0/1:9,8:17:88.67:89,0,116	1/1:1,5:6:15.09:88,15,0	0/1:2,8:10:7.89:127,0,8	1/1:0,5:5:5.90:36,6,0	1/1:0,7:7:18.44:108,18,0	1/1:1,4:5:10.28:69,10,0	1/1:0,6:6:17.48:105,17,0	1/1:0,5:5:13.55:78,14,0	1/1:1,10:11:23.25:128,23,0	1/1:1,6:7:9.32:60,9,0	1/1:0,2:2:5.36:31,5,0	1/1:2,4:6:3.71:78,4,0	1/1:3,1:4:3.57:22,4,0	./.	1/1:1,0:1:0.47:1,0,0	1/1:2,2:4:3.75:20,4,0	./.	1/1:3,4:7:13.35:70,13,0	1/1:1,6:7:1.23:87,1,0	0/1:9,8:17:8.22:126,0,8	0/1:2,5:7:15.42:79,0,15
chr10	100580367	.	ACT	A	1167.47	PASS	AB=0.935;AC=43;AF=0.796;AN=54;BaseQRankSum=-2.367;DP=183;FS=16.917;HRun=0;HaplotypeScore=152.2988;InbreedingCoeff=0.2444;MQ=50.86;MQ0=0;MQRankSum=-0.747;QD=6.83;ReadPosRankSum=0.855;VQSLOD=2.5192;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,1:3:5.67:31,6,0	1/1:1,0:1:0.47:1,0,0	0/0:2,0:2:2.59:0,3,10	0/0:4,0:4:4.64:0,5,38	1/1:5,5:10:18.47:120,18,0	0/1:11,1:12:9.73:16,0,10	1/1:9,1:10:2.68:22,3,0	1/1:9,9:18:27.49:362,27,0	1/1:5,1:6:3.61:23,4,0	1/1:8,2:10:12.27:92,12,0	1/1:5,0:5:2.63:7,3,0	0/1:7,0:7:0.42:1,0,0	0/1:4,1:5:3.75:15,0,4	0/0:6,0:6:2.46:0,2,7	1/1:5,0:5:0:0,0,0	0/1:10,1:11:10.37:13,0,10	1/1:6,1:7:3.36:34,3,0	1/1:3,0:3:2.71:9,3,0	1/1:9,1:10:8.90:58,9,0	1/1:1,3:4:3.33:22,3,0	./.	1/1:0,1:1:2.98:22,3,0	1/1:2,2:4:5.76:49,6,0	0/1:1,0:1:0:0,0,0	1/1:4,3:7:5.28:35,5,0	1/1:6,1:7:4.69:42,5,0	1/1:9,8:17:27.18:227,27,0	1/1:5,2:7:7.28:82,7,0
chr10	100580370	.	AT	A	1595.79	PASS	AB=0.725;AC=48;AF=0.889;AN=54;BaseQRankSum=3.560;DP=182;FS=27.132;HRun=1;HaplotypeScore=146.7844;InbreedingCoeff=0.1953;MQ=47.40;MQ0=0;MQRankSum=-0.414;QD=8.82;ReadPosRankSum=2.489;VQSLOD=-0.2867;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:1,2:3:7.93:8,0,12	1/1:0,1:1:2.88:15,3,0	0/1:1,0:1:0:0,0,0	0/1:3,1:4:23.91:29,0,24	1/1:5,5:10:18.68:73,19,0	1/1:1,11:12:16.07:107,16,0	1/1:1,9:10:21.99:87,22,0	1/1:9,9:18:18.40:159,18,0	1/1:1,5:6:14.93:72,15,0	1/1:2,8:10:22.76:185,23,0	1/1:0,5:5:10.45:52,10,0	1/1:0,7:7:19.29:88,19,0	1/1:1,4:5:9.31:35,9,0	1/1:0,6:6:13.35:48,13,0	1/1:0,5:5:12.38:49,12,0	1/1:1,10:11:7.31:68,7,0	1/1:1,6:7:9.93:34,10,0	0/1:0,3:3:7.67:29,0,8	1/1:1,9:10:21.98:151,22,0	1/1:3,1:4:2.94:11,3,0	./.	1/1:1,0:1:0.89:2,1,0	1/1:2,2:4:4.14:12,4,0	0/0:0,1:1:0.47:0,0,1	1/1:3,4:7:13.94:59,14,0	1/1:1,6:7:17.12:116,17,0	1/1:8,9:17:26.43:129,26,0	1/1:2,5:7:14.37:81,14,0
chr10	100580375	.	TTA	T	2776.17	PASS	AB=0.817;AC=48;AF=0.889;AN=54;BaseQRankSum=5.220;DP=183;FS=33.766;HRun=0;HaplotypeScore=145.6955;InbreedingCoeff=0.2666;MQ=50.86;MQ0=0;MQRankSum=-0.536;QD=15.34;ReadPosRankSum=1.471;VQSLOD=1.5587;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,2:3:5.40:46,5,0	1/1:0,1:1:3.01:37,3,0	0/0:1,0:1:3.01:0,3,40	0/1:4,1:5:36.20:36,0,55	1/1:5,5:10:7.90:85,8,0	1/1:1,11:12:29.41:216,29,0	1/1:1,9:10:23.44:164,23,0	1/1:9,9:18:19.77:208,20,0	1/1:1,5:6:14.62:128,15,0	1/1:2,8:10:20.94:235,21,0	1/1:0,5:5:8.99:91,9,0	1/1:0,7:7:20.93:181,21,0	1/1:1,4:5:11.64:85,12,0	1/1:0,6:6:17.78:122,18,0	1/1:0,5:5:14.86:118,15,0	1/1:1,10:11:18.98:136,19,0	1/1:1,6:7:9.19:62,9,0	1/1:0,3:3:8.61:73,9,0	1/1:1,9:10:23.57:230,24,0	0/1:3,1:4:0.62:15,0,1	./.	0/0:1,0:1:0.47:0,0,1	1/1:2,2:4:2.53:19,3,0	1/1:0,1:1:2.04:6,2,0	1/1:3,4:7:9.45:99,9,0	1/1:1,6:7:17.88:168,18,0	1/1:8,9:17:25.46:197,25,0	1/1:2,5:7:14.76:122,15,0
chr10	100580385	.	TA	T	1651.97	PASS	AB=0.833;AC=47;AF=0.940;AN=50;BaseQRankSum=3.204;DP=131;FS=29.673;HRun=1;HaplotypeScore=126.1304;InbreedingCoeff=0.2824;MQ=57.27;MQ0=0;MQRankSum=-3.378;QD=12.81;ReadPosRankSum=2.856;VQSLOD=1.1337;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:2.37:8,2,0	./.	0/0:1,0:1:3.01:0,3,48	0/1:4,1:5:23.85:24,0,90	1/1:0,5:5:7.82:32,8,0	1/1:0,10:10:28.71:158,29,0	1/1:0,9:9:22.73:118,23,0	1/1:0,8:8:17.40:141,17,0	1/1:0,4:4:11.73:69,12,0	1/1:0,7:7:19.24:168,19,0	1/1:0,5:5:2.74:12,3,0	1/1:0,6:6:14.52:82,15,0	1/1:0,4:4:11.12:54,11,0	1/1:0,6:6:16.66:78,17,0	1/1:0,5:5:11.11:54,11,0	1/1:0,9:9:20.54:106,21,0	1/1:0,6:6:10.33:47,10,0	1/1:0,3:3:5.20:30,5,0	1/1:0,8:8:20.04:133,20,0	1/1:0,1:1:2.84:14,3,0	./.	./.	1/1:0,2:2:2.80:13,3,0	1/1:0,1:1:0.47:1,0,0	1/1:0,3:3:8.77:50,9,0	1/1:0,6:6:14.46:104,14,0	1/1:0,9:9:26.18:160,26,0	1/1:0,5:5:14.80:99,15,0
chr10	100583225	.	A	ACGCA	939.72	PASS	AB=0.968;AC=12;AF=0.222;AN=54;BaseQRankSum=8.050;DP=527;FS=7.557;HRun=0;HaplotypeScore=101.2031;InbreedingCoeff=0.1275;MQ=74.66;MQ0=2;MQRankSum=-1.462;QD=5.40;ReadPosRankSum=1.356;VQSLOD=1.6016;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:69.17:0,69,1078	0/0:9,0:9:18.03:0,18,260	0/0:16,0:16:33.03:0,33,447	0/1:27,0:20:0.80:1,0,345	0/1:14,0:14:51.71:66,0,52	./.	0/0:21,0:20:5.55:0,6,47	0/1:21,0:21:26.09:134,0,26	0/0:13,0:13:16.04:0,16,513	0/0:22,0:22:45.15:0,45,763	0/0:13,0:13:23.89:0,24,390	0/0:18,0:18:45.09:0,45,715	0/0:7,0:7:15.04:0,15,235	0/0:17,0:17:42.12:0,42,664	0/0:28,0:28:66.17:0,66,1096	1/1:10,0:10:3.01:63,3,0	0/0:47,0:47:99:0,117,1977	0/0:24,0:23:57.08:0,57,909	0/1:15,0:15:2.38:137,0,2	0/1:13,6:20:18.05:18,0,19	0/1:28,0:27:46.15:277,0,46	0/0:11,0:11:27.04:0,27,415	0/0:8,0:8:20.66:0,21,326	0/0:40,0:39:99:0,99,1587	0/0:14,0:14:32.94:0,33,504	0/1:18,0:18:66.35:135,0,66	0/1:16,0:16:53.05:176,0,53	1/1:4,0:5:6.01:77,6,0
chr10	100583229	.	A	ACACGCG	334.69	PASS	AB=0.944;AC=11;AF=0.204;AN=54;BaseQRankSum=7.706;DP=551;FS=12.593;HRun=0;HaplotypeScore=125.7784;InbreedingCoeff=0.1341;MQ=68.03;MQ0=5;MQRankSum=-1.424;QD=2.16;ReadPosRankSum=-3.026;VQSLOD=0.6499;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:72.88:0,73,1423	0/0:10,0:10:23.94:0,24,377	0/0:13,0:13:35.67:0,36,575	0/1:22,0:15:6.68:7,0,349	0/1:17,0:17:12.61:13,0,82	./.	0/0:9,1:23:14.84:0,15,131	0/0:18,0:18:8.29:0,8,81	0/0:13,0:13:33.53:0,34,714	0/0:18,0:18:51.12:0,51,1108	0/0:13,0:13:29.95:0,30,553	0/0:18,0:18:45.09:0,45,966	0/0:9,0:9:17.99:0,18,328	0/0:16,0:16:42.12:0,42,901	0/0:30,0:30:72.05:0,72,1549	1/1:9,0:10:3.01:34,3,0	0/0:57,0:57:99:0,132,2791	0/0:25,0:24:60.09:0,60,1259	0/1:14,0:14:15.62:54,0,16	0/1:18,0:18:16.71:22,0,17	0/1:30,0:28:68.98:69,0,72	0/0:12,0:12:26.78:0,27,558	0/0:10,0:10:21:0,21,455	0/0:44,0:43:99:0,108,2182	0/0:13,0:13:33.04:0,33,673	0/1:8,0:22:99:138,0,113	0/1:16,0:16:41.17:41,0,112	1/1:6,0:6:8.99:103,9,0
chr10	100583237	.	G	GCGCGCA	2413.67	PASS	AB=0.790;AC=16;AF=0.296;AN=54;BaseQRankSum=-2.910;DP=553;FS=3.731;HRun=0;HaplotypeScore=112.3249;InbreedingCoeff=0.7294;MQ=56.99;MQ0=9;MQRankSum=-1.964;QD=15.18;ReadPosRankSum=-1.826;VQSLOD=2.8865;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:65.22:0,65,865	0/0:8,0:9:18.06:0,18,262	0/0:8,0:8:21.07:0,21,348	0/0:16,0:9:24.85:0,25,350	1/1:18,0:18:18:233,18,0	./.	0/0:20,1:19:4.18:0,4,21	1/1:13,0:12:30:372,30,0	0/0:15,0:15:2.14:0,2,479	0/0:19,0:19:53.75:0,54,776	0/0:12,0:12:24.07:0,24,357	0/0:14,0:17:39.12:0,39,602	0/0:9,0:9:14.97:0,15,203	0/0:15,0:19:39.10:0,39,586	0/0:26,0:26:66.17:0,66,1056	0/1:5,13:18:14.20:38,0,14	0/0:46,0:57:99:0,123,1970	0/0:24,0:26:46.84:0,47,891	1/1:15,0:15:25.80:301,26,0	0/1:19,0:19:8.69:109,0,9	1/1:36,0:33:48.16:698,48,0	0/0:12,0:11:24.04:0,24,354	0/0:8,0:11:18.06:0,18,288	0/0:42,0:46:99:0,114,1610	0/0:14,0:14:35.69:0,36,478	1/1:20,0:21:18.18:342,18,0	1/1:15,0:15:3.82:374,4,0	1/1:2,1:4:6.49:134,6,0
chr10	100584646	.	C	CA	1913.19	PASS	AB=0.759;AC=30;AF=0.536;AN=56;BaseQRankSum=-0.437;DP=555;FS=10.644;HRun=15;HaplotypeScore=87.3431;InbreedingCoeff=0.4297;MQ=79.73;MQ0=0;MQRankSum=1.623;QD=5.14;ReadPosRankSum=-4.292;VQSLOD=0.3384;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,32:51:10.45:265,10,0	0/0:10,0:11:13.68:0,14,78	0/0:25,0:22:1.46:0,1,39	0/0:15,0:13:9.02:0,9,36	1/1:5,15:22:32.49:225,32,0	1/1:7,10:18:2.81:122,3,0	1/1:5,16:21:2.95:130,3,0	1/1:13,8:21:2.92:125,3,0	0/0:18,0:18:11.24:0,11,98	0/1:22,2:27:34.35:34,0,89	0/0:12,0:14:14.66:0,15,91	0/1:11,9:23:11.47:99,0,11	0/0:13,0:13:5.52:0,6,36	1/1:6,8:14:5.95:44,6,0	0/0:23,0:23:25.27:0,25,149	1/1:9,13:22:4.20:134,4,0	0/0:23,0:23:39.87:0,40,237	0/0:20,0:23:14.18:0,14,169	1/1:6,10:16:16.75:209,17,0	0/1:10,10:20:2.93:122,0,3	0/1:12,2:17:19.88:106,0,20	1/1:8,7:15:20.09:134,20,0	0/1:12,5:17:14.46:14,0,41	1/1:9,20:29:14.97:124,15,0	0/0:16,0:16:17.01:0,17,98	0/1:10,7:17:0.09:97,0,0	1/1:4,13:17:9.86:74,10,0	1/1:3,1:5:5.84:39,6,0
chr10	100585693	.	AGCCGC	A	6801.41	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=12.868;DP=583;FS=0.828;HRun=0;HaplotypeScore=117.8950;InbreedingCoeff=0.9438;MQ=77.05;MQ0=1;MQRankSum=-8.264;QD=41.98;ReadPosRankSum=5.635;VQSLOD=4.5255;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:39:81.28:1803,81,0	0/0:9,0:9:27.09:0,27,868	0/1:21,0:15:0.35:0,0,946	0/0:28,0:27:58.02:0,58,1607	0/0:19,0:19:54.15:0,54,1566	0/0:13,0:13:39.13:0,39,1226	0/0:27,0:27:78.27:0,78,2491	0/0:16,0:16:48.13:0,48,1360	0/0:21,0:21:63.20:0,63,1952	0/0:21,0:21:63.21:0,63,1852	0/0:9,0:9:21.07:0,21,619	1/1:1,18:19:36.12:801,36,0	0/0:20,0:20:60.16:0,60,1668	1/1:0,24:24:60.21:1327,60,0	0/0:24,0:24:72.23:0,72,2249	0/0:20,0:20:57.20:0,57,1839	0/0:29,0:29:81.24:0,81,2355	0/0:19,0:19:54:0,54,1665	0/0:13,0:13:39.13:0,39,1156	0/0:22,0:22:63.20:0,63,1764	0/0:29,0:29:87.28:0,87,2618	1/1:2,21:23:63.22:1400,63,0	1/1:0,12:12:18.06:401,18,0	1/1:0,24:24:48.16:1069,48,0	0/0:23,0:23:66.23:0,66,2049	0/0:19,0:19:57.20:0,57,1757	0/0:22,0:22:66.23:0,66,2041	0/0:18,0:18:54.19:0,54,1695
chr10	100586146	.	T	TA	4181.60	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.698;DP=662;FS=7.791;HRun=5;HaplotypeScore=66.8711;InbreedingCoeff=0.9998;MQ=58.78;MQ0=2;MQRankSum=0.304;QD=32.93;ReadPosRankSum=0.933;VQSLOD=4.1382;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:34:59.96:1058,60,0	0/0:15,0:15:36.07:0,36,378	0/0:19,0:14:33.02:0,33,322	0/0:14,0:11:32.64:0,33,316	0/0:27,0:27:81.19:0,81,862	0/0:25,0:25:72.16:0,72,763	0/0:18,0:18:51.13:0,51,548	0/0:44,0:44:99:0,117,1243	0/0:25,0:25:75.06:0,75,754	0/0:25,0:25:72.18:0,72,771	0/0:35,0:35:99:0,99,1064	1/1:1,17:18:51.17:671,51,0	0/0:22,0:22:60.15:0,60,644	1/1:1,16:17:36.12:474,36,0	0/0:29,0:29:81.19:0,81,862	0/0:14,0:14:39.10:0,39,419	0/0:14,0:14:39.10:0,39,419	0/0:26,0:26:60.15:0,60,644	0/0:31,0:28:69.17:0,69,742	0/0:33,0:33:87.22:0,87,934	0/0:17,0:17:45.11:0,45,483	1/1:2,19:21:51.12:644,51,0	1/1:0,22:22:66.21:861,66,0	1/1:2,13:15:36.12:474,36,0	0/0:29,0:29:81.20:0,81,869	0/0:29,0:29:81.20:0,81,870	0/0:22,0:22:54.12:0,54,572	0/0:22,0:22:63.09:0,63,653
chr10	100586288	.	T	TA	2381.53	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.007;DP=523;FS=4.911;HRun=0;HaplotypeScore=68.1734;InbreedingCoeff=0.9651;MQ=57.32;MQ0=5;MQRankSum=-5.880;QD=35.02;ReadPosRankSum=2.661;VQSLOD=3.3014;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:22:57.18:865,57,0	0/0:4,0:4:12.04:0,12,168	0/0:16,0:10:27.09:0,27,372	0/0:15,0:11:33.11:0,33,459	0/0:18,0:18:45.15:0,45,629	0/0:20,0:20:57.19:0,57,797	0/0:23,0:23:57.15:0,57,774	0/0:42,0:40:99:0,120,1620	0/0:19,0:18:45.13:0,45,597	0/0:31,0:30:90.30:0,90,1254	0/0:11,0:11:33.10:0,33,447	1/1:0,13:13:27.09:426,27,0	0/0:20,0:20:60.18:0,60,806	1/1:1,9:9:27.09:410,27,0	0/0:26,0:25:66.21:0,66,908	0/0:31,0:30:87.26:0,87,1168	0/0:26,0:25:69.20:0,69,915	0/0:19,0:18:45.13:0,45,607	0/0:21,0:18:54.18:0,54,755	0/0:21,0:20:57.19:0,57,794	0/0:14,0:13:33.10:0,33,445	1/1:0,5:5:12.04:189,12,0	1/1:0,13:13:39.12:578,39,0	1/1:0,4:4:6.02:94,6,0	0/0:18,0:16:48.15:0,48,655	0/0:27,0:27:75.25:0,75,1046	0/0:19,0:18:54.16:0,54,719	0/0:13,0:13:39.13:0,39,545
chr10	100586919	.	C	CT	8969.02	PASS	AB=0.581;AC=33;AF=0.589;AN=56;BaseQRankSum=-11.277;DP=601;FS=0.351;HRun=10;HaplotypeScore=63.8270;InbreedingCoeff=0.8811;MQ=71.10;MQ0=0;MQRankSum=-0.960;QD=22.48;ReadPosRankSum=0.463;VQSLOD=5.6047;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,18:25:10.90:512,0,11	0/0:7,0:7:17.98:0,18,148	0/0:10,0:9:6.92:0,7,52	0/0:10,0:9:7.20:0,7,49	1/1:10,28:39:77.69:752,78,0	1/1:6,21:28:22.81:640,23,0	1/1:4,12:16:8.35:280,8,0	1/1:12,19:31:39.23:568,39,0	0/0:15,0:15:23.87:0,24,189	0/0:20,0:21:52.96:0,53,425	0/0:16,0:18:37.01:0,37,280	1/1:3,13:17:35.92:366,36,0	0/0:17,1:18:9.94:0,10,285	1/1:3,26:29:75.19:799,75,0	0/0:33,3:36:57.89:0,58,682	1/1:2,18:20:26.48:487,26,0	0/0:16,0:16:35.92:0,36,293	0/0:18,0:18:44.94:0,45,369	1/1:3,15:18:45.09:471,45,0	1/1:4,26:30:47.53:709,48,0	1/1:2,7:9:18.05:192,18,0	1/1:2,15:17:17.46:389,17,0	1/1:2,22:24:14.29:530,14,0	1/1:3,15:18:36.09:384,36,0	0/0:32,0:32:83.88:0,84,686	1/1:8,23:31:47.52:700,48,0	1/1:3,30:33:78.20:831,78,0	1/1:1,13:14:14.45:359,14,0
chr10	100588140	.	AT	A	648	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=7.270;DP=635;FS=3.326;HRun=9;HaplotypeScore=58.1379;InbreedingCoeff=0.8613;MQ=75.52;MQ0=0;MQRankSum=-1.692;QD=13.22;ReadPosRankSum=0.484;VQSLOD=3.4059;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:84.24:0,84,960	1/1:1,13:14:33.02:302,33,0	0/1:14,0:15:0.35:0,0,240	0/0:9,0:9:14.96:0,15,154	0/0:27,0:27:78.23:0,78,899	0/0:32,0:32:69.21:0,69,796	0/0:20,0:20:48.14:0,48,554	0/0:25,0:25:63.19:0,63,726	0/0:17,0:17:45.12:0,45,511	0/0:29,0:29:69.14:0,69,795	0/0:23,0:23:63.16:0,63,707	0/0:33,0:33:78.23:0,78,900	0/0:19,0:19:54.16:0,54,623	0/0:24,0:24:57.17:0,57,658	1/1:2,18:20:51.03:467,51,0	0/0:25,0:25:72.21:0,72,831	0/0:26,0:26:72.21:0,72,830	0/0:13,0:13:36.09:0,36,404	0/0:10,0:10:15.04:0,15,172	0/0:34,1:35:65.81:0,66,1010	0/0:15,0:15:36.09:0,36,405	0/0:28,0:28:81.22:0,81,916	0/0:27,0:27:78.19:0,78,885	0/0:18,0:18:51.14:0,51,579	0/0:24,0:24:69.21:0,69,796	0/0:23,1:24:38.70:0,39,675	0/0:31,1:32:53.75:0,54,853	0/0:17,0:17:33.02:0,33,333
chr10	100589055	.	T	TAA	3728.43	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-4.733;DP=496;FS=1.454;HRun=10;HaplotypeScore=65.6666;InbreedingCoeff=0.9191;MQ=72.61;MQ0=0;MQRankSum=-0.687;QD=30.56;ReadPosRankSum=0.889;VQSLOD=3.9941;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:27:69.06:997,69,0	0/0:11,0:11:30.07:0,30,305	0/0:11,0:10:7.19:0,7,68	0/1:8,0:8:0.07:0,0,91	0/0:17,0:17:37.65:0,38,383	0/0:15,0:15:42.07:0,42,427	0/0:15,0:15:39.06:0,39,396	0/0:18,0:18:39.03:0,39,385	0/0:14,0:14:30.03:0,30,305	0/0:18,0:20:47.52:0,48,451	0/0:10,0:10:24.03:0,24,244	1/1:2,15:19:35.61:501,36,0	0/0:16,0:16:39.04:0,39,397	1/1:2,11:13:33:464,33,0	0/0:27,0:29:62.53:0,63,603	0/0:16,0:16:39.02:0,39,386	0/0:30,0:30:84.10:0,84,827	0/0:26,0:26:63.07:0,63,631	0/0:17,0:18:47.84:0,48,470	0/0:26,0:27:65.88:0,66,652	0/0:7,0:7:18.03:0,18,183	1/1:2,12:14:35.56:476,36,0	1/1:4,13:19:42.10:574,42,0	1/1:2,19:22:48.16:716,48,0	0/0:21,0:21:48.08:0,48,488	0/0:16,0:16:42.08:0,42,427	0/0:31,0:34:95.41:0,95,920	0/0:3,0:3:9.02:0,9,92
chr10	100589168	.	CA	C	783.61	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.452;DP=647;FS=0.000;HRun=2;HaplotypeScore=78.0104;InbreedingCoeff=0.9681;MQ=86.45;MQ0=0;MQRankSum=-7.506;QD=29.02;ReadPosRankSum=2.120;VQSLOD=3.2567;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,1977	1/1:1,3:4:9.03:108,9,0	0/0:21,0:21:55.67:0,56,715	0/0:25,0:25:69.17:0,69,928	0/0:27,0:27:78.25:0,78,1149	0/0:23,0:23:66.22:0,66,989	0/0:17,0:17:48.15:0,48,699	0/0:29,0:29:81.25:0,81,1159	0/0:18,0:18:54.18:0,54,809	0/0:29,0:29:84.26:0,84,1222	0/0:16,0:16:48.16:0,48,719	0/0:30,0:30:90.30:0,90,1344	0/0:23,0:23:69.22:0,69,993	0/0:23,0:23:69.23:0,69,1025	1/1:2,21:23:66.20:790,66,0	0/0:35,0:35:99:0,105,1519	0/0:24,0:24:69.22:0,69,1010	0/0:24,0:24:72.24:0,72,1077	0/0:17,0:17:51.15:0,51,742	0/0:22,0:22:66.22:0,66,989	0/0:42,0:42:99:0,123,1798	0/0:13,0:13:39.13:0,39,585	0/0:13,0:13:39.08:0,39,541	0/0:30,0:30:90.26:0,90,1323	0/0:29,0:29:84.27:0,84,1238	0/0:13,0:13:39.11:0,39,546	0/0:25,0:25:75.22:0,75,1083	0/0:8,0:8:24.08:0,24,360
chr10	100589177	.	AGAG	A	598.56	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.146;DP=637;FS=0.000;HRun=0;HaplotypeScore=101.9897;InbreedingCoeff=0.9680;MQ=86.25;MQ0=0;MQRankSum=-8.085;QD=26.02;ReadPosRankSum=2.972;VQSLOD=3.4663;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,3223	1/1:0,3:3:9.02:99,9,0	0/0:20,0:20:54.18:0,54,1249	0/0:25,0:25:66.21:0,66,1466	0/0:26,0:26:75.24:0,75,1792	0/0:21,0:21:63.22:0,63,1514	0/0:23,0:23:69.24:0,69,1664	0/0:27,0:27:75.25:0,75,1780	0/0:21,0:21:63.20:0,63,1441	0/0:28,0:28:84.29:0,84,2040	0/0:15,0:15:45.15:0,45,1084	0/0:31,0:31:93.32:0,93,2248	0/0:19,0:19:57.20:0,57,1404	0/0:23,0:23:69.24:0,69,1701	1/1:0,20:20:60.13:614,60,0	0/0:31,0:31:93.31:0,93,2205	0/0:24,0:24:72.25:0,72,1765	0/0:26,0:26:78.27:0,78,1884	0/0:20,0:20:60.21:0,60,1447	0/0:23,0:23:69.24:0,69,1699	0/0:41,0:41:99:0,117,2793	0/0:14,0:14:42.13:0,42,938	0/0:14,0:14:42.14:0,42,1029	0/0:27,0:27:81.28:0,81,1996	0/0:28,0:28:84.29:0,84,1991	0/0:11,0:11:33.11:0,33,766	0/0:24,0:24:72.25:0,72,1747	0/0:8,0:8:24.08:0,24,592
chr10	100589182	.	G	GTT	714.84	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.141;DP=617;FS=0.000;HRun=0;HaplotypeScore=86.1756;InbreedingCoeff=0.9680;MQ=85.20;MQ0=0;MQRankSum=-8.089;QD=31.08;ReadPosRankSum=2.730;VQSLOD=5.4791;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,2029	1/1:0,3:3:9.03:114,9,0	0/0:19,0:20:60.15:0,60,889	0/0:21,0:21:60.17:0,60,887	0/0:25,0:25:75.22:0,75,1147	0/0:21,0:21:63.22:0,63,1023	0/0:23,0:23:69.22:0,69,1100	0/0:27,0:27:75.23:0,75,1163	0/0:18,0:18:54.18:0,54,874	0/0:27,0:27:78.27:0,78,1273	0/0:15,0:15:45.12:0,45,703	0/0:29,0:29:87.27:0,87,1370	0/0:21,0:21:63.20:0,63,993	0/0:24,0:24:72.23:0,72,1149	1/1:0,20:20:60.18:715,60,0	0/0:27,0:27:81.28:0,81,1316	0/0:25,0:25:75.26:0,75,1207	0/0:27,0:27:81.25:0,81,1294	0/0:21,0:21:63.20:0,63,998	0/0:24,0:24:69.24:0,69,1119	0/0:37,0:37:99:0,108,1678	0/0:13,0:13:39.12:0,39,612	0/0:13,0:13:39.13:0,39,635	0/0:27,0:27:81.28:0,81,1311	0/0:27,0:27:78.27:0,78,1272	0/0:11,0:11:33.11:0,33,533	0/0:20,0:20:60.20:0,60,971	0/0:8,0:8:24.08:0,24,391
chr10	100591050	.	AT	A	9080.29	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=10.730;DP=570;FS=4.964;HRun=9;HaplotypeScore=53.5600;InbreedingCoeff=0.9738;MQ=71.90;MQ0=1;MQRankSum=-0.180;QD=22.87;ReadPosRankSum=0.970;VQSLOD=5.7826;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,14:22:42.01:384,42,0	1/1:0,6:6:15.01:137,15,0	0/0:10,0:10:16.59:0,17,166	0/0:8,0:7:4.54:0,5,54	1/1:1,24:25:72.04:659,72,0	1/1:0,20:19:57.03:522,57,0	1/1:2,13:15:36.02:330,36,0	1/1:10,29:38:84.01:763,84,0	0/0:20,1:21:29.69:0,30,585	0/0:30,0:31:78.06:0,78,872	0/0:22,0:23:62.97:0,63,684	1/1:2,15:17:42.02:384,42,0	0/0:13,0:13:39.10:0,39,437	1/1:1,20:21:57.03:522,57,0	1/1:2,26:28:72.04:659,72,0	1/1:0,18:17:51.03:467,51,0	0/0:25,0:23:69.20:0,69,795	0/0:12,0:12:24.07:0,24,277	1/1:0,14:14:42.02:384,42,0	1/1:4,28:32:81.03:741,81,0	1/1:4,18:22:51.02:467,51,0	1/1:3,18:21:48.01:439,48,0	1/1:1,23:24:66.04:604,66,0	1/1:2,16:18:45.02:412,45,0	0/0:28,0:29:84.04:0,84,921	1/1:2,18:20:54.03:494,54,0	1/1:4,15:18:39.02:357,39,0	1/1:3,13:16:39.02:357,39,0
chr10	100591753	.	AT	A	10500.12	PASS	AB=0.575;AC=37;AF=0.661;AN=56;BaseQRankSum=11.776;DP=621;FS=19.060;HRun=8;HaplotypeScore=70.6400;InbreedingCoeff=0.9219;MQ=85.06;MQ0=0;MQRankSum=-1.868;QD=25.42;ReadPosRankSum=1.747;VQSLOD=3.5485;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:78.12:753,78,0	1/1:1,5:6:15.02:145,15,0	0/0:20,0:21:52.54:0,53,571	0/0:19,0:19:36.07:0,36,395	1/1:3,20:23:60.08:574,60,0	1/1:1,32:33:99:950,99,0	1/1:0,23:23:66.11:637,66,0	1/1:8,21:29:60.07:574,60,0	0/0:17,0:17:45.11:0,45,522	0/0:21,0:21:57.09:0,57,669	0/0:25,0:25:66.20:0,66,797	1/1:3,18:21:57.09:550,57,0	0/0:22,0:22:54.12:0,54,634	1/1:0,18:18:51.08:492,51,0	1/1:1,28:29:84.13:811,84,0	1/1:1,20:21:60.10:579,60,0	0/0:34,0:34:93.29:0,93,1123	0/0:26,0:26:63.19:0,63,760	1/1:5,19:24:60.04:570,60,0	1/1:1,14:15:42.06:406,42,0	1/1:4,15:19:48.04:452,48,0	1/1:2,20:22:57.09:550,57,0	1/1:2,21:23:60.09:579,60,0	1/1:3,13:16:48.07:459,48,0	0/0:23,0:23:51.16:0,51,616	0/1:6,17:23:12.39:461,0,12	1/1:7,22:29:78.03:726,78,0	1/1:0,9:9:24.04:232,24,0
chr10	100591818	.	AT	A	7259.38	PASS	AB=0.774;AC=38;AF=0.679;AN=56;BaseQRankSum=9.857;DP=576;FS=3.803;HRun=10;HaplotypeScore=77.2131;InbreedingCoeff=0.8339;MQ=83.06;MQ0=3;MQRankSum=-1.917;QD=18.24;ReadPosRankSum=2.473;VQSLOD=5.6676;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,15:20:47.96:413,48,0	1/1:0,4:4:12:104,12,0	0/1:43,0:26:8.71:9,0,127	0/0:30,0:22:6.26:0,6,112	1/1:5,18:23:59.95:514,60,0	1/1:6,30:36:83.98:728,84,0	1/1:8,12:20:44.95:384,45,0	1/1:6,24:30:71.80:597,72,0	0/0:19,0:19:51.10:0,51,544	0/0:18,0:18:48.12:0,48,516	0/0:18,0:18:45.06:0,45,462	1/1:2,6:8:20.97:179,21,0	0/0:21,0:21:60.12:0,60,637	1/1:5,9:14:32.96:280,33,0	1/1:6,10:16:29.98:260,30,0	1/1:4,15:19:47.97:413,48,0	0/0:32,0:32:78.16:0,78,833	0/0:17,0:17:48.11:0,48,521	1/1:2,21:23:62.95:537,63,0	1/1:5,11:16:7.81:299,8,0	1/1:4,14:18:44.47:354,44,0	1/1:6,13:19:47.96:414,48,0	1/1:3,16:19:41.98:364,42,0	1/1:3,15:18:41.97:360,42,0	0/0:22,0:22:57.14:0,57,620	0/1:4,19:23:3.24:428,0,3	1/1:2,22:24:59.90:520,60,0	1/1:0,5:5:12:104,12,0
chr10	100592685	.	G	GGA	7669.51	PASS	AB=0.986;AC=23;AF=0.411;AN=56;BaseQRankSum=3.220;DP=708;FS=8.744;HRun=0;HaplotypeScore=136.0027;InbreedingCoeff=0.2012;MQ=75.52;MQ0=26;MQRankSum=-0.921;QD=16.32;ReadPosRankSum=0.718;VQSLOD=4.1333;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:34:36.80:40,0,37	0/0:7,0:7:1.49:0,1,21	0/0:72,0:41:85.22:0,85,1281	0/1:97,0:43:1:1,0,794	0/1:28,0:28:70.97:639,0,71	1/1:24,0:23:37.99:725,38,0	1/1:27,1:27:54.46:727,54,0	1/1:28,0:27:72.86:1118,73,0	0/0:14,0:14:42.11:0,42,563	0/0:24,0:24:72.24:0,72,1099	0/0:15,0:15:35.25:0,35,480	0/0:15,0:14:1.44:0,1,23	0/0:21,0:20:47.70:0,48,645	0/0:13,0:13:2.84:0,3,44	1/1:15,0:15:6.32:49,6,0	0/1:22,1:23:23.24:659,0,23	0/0:19,0:19:24.33:0,24,378	0/0:26,0:26:68:0,68,926	1/1:17,0:16:31.10:616,31,0	1/1:27,0:27:38.64:911,39,0	0/1:21,0:20:45.90:492,0,46	0/1:24,0:24:4.94:22,0,5	0/1:22,0:22:2.28:45,0,2	0/1:25,0:23:3.77:33,0,4	0/0:12,0:12:36.12:0,36,554	0/1:28,0:28:99:826,0,105	0/1:14,2:16:38.94:541,0,39	0/1:12,0:12:59.21:226,0,59
chr10	100592725	.	C	CAG	8342.67	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-2.025;DP=607;FS=4.730;HRun=0;HaplotypeScore=115.6626;InbreedingCoeff=0.9993;MQ=71.01;MQ0=0;MQRankSum=-0.626;QD=34.91;ReadPosRankSum=0.668;VQSLOD=7.1482;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:92.05:0,92,1116	0/0:14,0:14:30.08:0,30,367	0/0:33,0:30:47.84:0,48,678	0/0:31,0:32:52.83:0,53,624	1/1:2,16:19:48.09:702,48,0	1/1:2,22:24:48.16:803,48,0	1/1:3,17:20:36.12:589,36,0	1/1:12,26:38:78.21:1195,78,0	0/0:16,0:16:45.12:0,45,547	0/0:19,0:19:48.15:0,48,601	0/0:13,0:13:30.09:0,30,369	0/0:19,0:19:54.17:0,54,687	0/0:19,0:19:50.86:0,51,602	0/0:15,0:15:36.09:0,36,428	0/0:13,0:13:33.11:0,33,420	1/1:3,9:12:24.08:385,24,0	0/0:20,0:20:48.12:0,48,590	0/0:31,0:31:90.25:0,90,1125	1/1:5,13:18:42.08:624,42,0	1/1:3,17:20:45.09:721,45,0	1/1:2,25:29:60.20:975,60,0	0/0:30,0:30:66.20:0,66,828	0/0:16,0:16:42.11:0,42,508	0/0:29,0:29:78.12:0,78,927	0/0:13,0:13:36.12:0,36,458	1/1:2,27:29:81.23:1295,81,0	1/1:1,10:11:30.10:501,30,0	1/1:5,13:18:33.11:552,33,0
chr10	100594281	.	C	CGTAT	2167.29	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.909;DP=732;FS=2.308;HRun=0;HaplotypeScore=175.7070;InbreedingCoeff=0.9941;MQ=65.84;MQ0=2;MQRankSum=-4.210;QD=12.90;ReadPosRankSum=-4.053;VQSLOD=2.7884;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:14.61:285,15,0	0/0:13,0:13:24.07:0,24,379	0/0:27,0:22:45.08:0,45,604	0/0:17,0:13:23.94:0,24,352	0/0:33,0:33:48.06:0,48,689	0/0:19,0:19:42.12:0,42,654	0/0:21,0:21:48.12:0,48,765	0/0:40,0:40:81.21:0,81,1262	0/0:28,0:28:71.04:0,71,1149	0/0:41,0:41:99:0,111,1737	0/0:27,0:27:63.14:0,63,962	1/1:35,1:36:36.04:517,36,0	0/0:31,0:31:84.27:0,84,1395	1/1:9,24:34:26.86:253,27,0	0/0:20,0:20:54.17:0,54,880	0/0:32,0:32:45.14:0,45,733	0/0:22,0:22:51.15:0,51,787	0/0:18,0:18:20.45:0,20,618	0/0:23,0:23:36.11:0,36,579	0/0:34,0:34:66.18:0,66,1075	0/0:15,0:15:32.96:0,33,467	1/1:8,15:23:47.57:431,48,0	1/1:27,0:27:29.85:337,30,0	1/1:21,2:23:29.89:531,30,0	0/0:21,0:21:60.21:0,60,1009	0/0:27,0:27:54.18:0,54,879	0/0:40,0:38:75.71:0,76,1266	0/0:15,0:15:39.13:0,39,656
chr10	100594293	.	TGTAA	T	1309.50	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.917;DP=725;FS=2.608;HRun=0;HaplotypeScore=173.0469;InbreedingCoeff=0.9582;MQ=59.38;MQ0=4;MQRankSum=-4.211;QD=8.29;ReadPosRankSum=-6.366;VQSLOD=0.2400;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,17:22:2.32:5,2,0	0/0:13,0:13:24.02:0,24,446	0/0:23,0:16:38.08:0,38,598	0/0:21,0:10:26.45:0,26,572	0/0:34,0:34:47.32:0,47,751	0/0:23,0:23:40.81:0,41,540	0/0:17,0:17:48.07:0,48,993	0/0:37,0:36:99:0,102,2144	0/0:25,0:25:72.22:0,72,1761	0/0:42,0:42:99:0,126,2841	0/0:28,0:28:78.19:0,78,1624	1/1:5,30:35:25.01:327,25,0	0/0:32,0:32:93.28:0,93,2181	1/1:28,6:34:29.69:325,30,0	0/0:24,0:24:53.79:0,54,992	0/0:28,0:28:44.91:0,45,972	0/0:21,0:20:54.12:0,54,1070	0/0:17,0:17:30.32:0,30,898	0/0:18,0:18:38.92:0,39,720	0/0:32,0:32:65.25:0,65,1202	0/0:15,0:15:32.98:0,33,653	1/1:17,5:22:47.12:416,47,0	1/1:2,21:23:23.80:291,24,0	1/1:16,6:21:12.86:121,13,0	0/0:27,0:27:78.23:0,78,1696	0/0:29,0:29:53.91:0,54,992	0/0:45,0:44:74.41:0,74,1313	0/0:16,0:16:39.01:0,39,840
chr10	100594307	.	CATGTATGTATGTATGT	C	6724.89	PASS	AC=22;AF=0.423;AN=52;BaseQRankSum=4.778;DP=691;FS=1.027;HRun=0;HaplotypeScore=272.5575;InbreedingCoeff=0.9205;MQ=55.47;MQ0=7;MQRankSum=-4.078;QD=23.43;ReadPosRankSum=0.048;VQSLOD=3.2300;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:10.22:0,10,73	0/0:4,0:10:8.95:0,9,91	./.	./.	1/1:7,21:28:21.06:570,21,0	1/1:6,20:26:24.08:1005,24,0	1/1:19,0:19:18.01:299,18,0	1/1:28,0:26:12.02:154,12,0	0/0:28,0:30:66.18:0,66,2823	0/0:37,0:37:75.24:0,75,4335	0/0:21,0:21:45.15:0,45,2712	0/0:33,0:35:23.94:0,24,517	0/0:33,0:33:72.24:0,72,3880	0/0:33,0:33:23.99:0,24,526	0/0:11,0:24:24.08:0,24,494	1/1:11,15:26:6.02:247,6,0	0/0:19,0:18:42.08:0,42,1772	0/0:20,0:20:39.05:0,39,1294	1/1:8,10:18:23.70:735,24,0	1/1:14,17:31:9.53:672,10,0	1/1:17,0:17:14.98:222,15,0	0/0:20,0:21:20.98:0,21,435	0/0:23,0:23:20.97:0,21,439	0/0:16,0:17:17.16:0,17,418	0/0:23,0:23:60.18:0,60,3404	1/1:6,23:29:65.56:1332,66,0	1/1:16,33:49:33.11:1358,33,0	1/1:11,5:15:3.01:132,3,0
chr10	100594501	.	CT	C	1889.22	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.010;DP=572;FS=1.337;HRun=11;HaplotypeScore=67.5619;InbreedingCoeff=0.9143;MQ=70.02;MQ0=0;MQRankSum=-1.068;QD=17.82;ReadPosRankSum=3.211;VQSLOD=4.7847;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:47.94:394,48,0	0/0:6,0:6:15.01:0,15,143	0/0:24,0:17:4.99:0,5,163	0/0:11,0:8:9.02:0,9,92	0/0:27,0:27:66.17:0,66,703	0/0:36,1:37:80.59:0,81,1052	0/0:13,0:14:32.92:0,33,334	0/0:41,2:44:37.75:0,38,790	0/0:11,0:11:27.07:0,27,288	0/0:25,2:27:7.84:0,8,490	0/0:24,3:28:4.20:0,4,644	1/1:3,16:19:44.94:369,45,0	0/0:17,0:17:48.11:0,48,505	1/1:2,10:12:29.96:246,30,0	0/0:12,0:12:30.06:0,30,312	0/0:20,1:21:29.49:0,29,519	0/0:23,1:24:29.49:0,29,519	0/0:15,1:16:20.47:0,20,423	0/0:13,0:13:33.08:0,33,352	0/0:27,0:27:72.18:0,72,767	0/0:11,0:11:18.03:0,18,184	1/1:4,17:21:18.93:361,19,0	1/1:3,20:23:56.93:468,57,0	1/1:1,11:12:29.81:235,30,0	0/0:24,0:24:66.16:0,66,698	0/0:24,1:25:41.38:0,41,620	0/0:33,1:35:71.45:0,71,930	0/0:10,0:10:27.07:0,27,288
chr10	100594630	.	A	AT	8214.84	PASS	AB=0.909;AC=35;AF=0.625;AN=56;BaseQRankSum=-6.894;DP=478;FS=2.378;HRun=9;HaplotypeScore=55.1643;InbreedingCoeff=0.9103;MQ=68.23;MQ0=0;MQRankSum=-2.311;QD=23.95;ReadPosRankSum=-0.514;VQSLOD=5.4691;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,28:34:48.85:747,49,0	0/0:4,0:4:12:0,12,104	0/0:11,0:10:16.79:0,17,138	0/0:5,0:5:6.78:0,7,51	1/1:3,16:19:48.08:508,48,0	1/1:4,17:21:45.12:498,45,0	1/1:0,13:13:36.10:398,36,0	1/1:3,29:32:64.17:927,64,0	0/1:9,1:10:6.20:6,0,178	0/0:19,0:19:50.98:0,51,443	0/0:20,0:20:53.94:0,54,462	1/1:4,13:17:36.10:398,36,0	0/0:17,0:17:47.99:0,48,417	1/1:1,15:16:36.10:398,36,0	0/0:11,0:10:32.98:0,33,282	1/1:4,20:24:54.15:597,54,0	0/0:17,0:17:35.95:0,36,307	0/0:12,0:12:29.99:0,30,260	1/1:4,11:15:33.09:365,33,0	1/1:6,21:27:61.35:648,61,0	1/1:1,5:6:12.03:133,12,0	1/1:2,12:14:37.34:401,37,0	1/1:11,12:23:47.94:479,48,0	1/1:1,6:7:18.05:199,18,0	0/0:18,1:19:14.80:0,15,357	1/1:3,15:18:22.02:438,22,0	1/1:3,27:31:69.02:742,69,0	1/1:3,13:16:30.08:332,30,0
chr10	100598370	.	AG	A	3814.10	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.995;DP=579;FS=4.074;HRun=4;HaplotypeScore=81.6536;InbreedingCoeff=0.9624;MQ=60.61;MQ0=1;MQRankSum=4.020;QD=31.01;ReadPosRankSum=2.054;VQSLOD=4.1621;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,31:41:99:1268,108,0	0/0:7,0:7:18.06:0,18,252	0/0:12,0:9:3.88:0,4,96	0/0:15,0:12:17.09:0,17,263	0/0:16,0:16:39.11:0,39,501	0/0:18,0:18:51.17:0,51,699	0/0:27,0:27:78.23:0,78,1055	0/0:29,0:29:84.26:0,84,1150	0/0:24,0:24:60.20:0,60,831	0/0:26,0:26:72.24:0,72,998	0/0:14,0:14:35.71:0,36,495	1/1:5,16:21:60.14:702,60,0	0/0:22,0:22:60.18:0,60,820	1/1:2,15:17:45.14:539,45,0	0/0:14,0:14:42.14:0,42,579	0/0:29,0:29:69.21:0,69,946	0/0:35,0:35:99:0,102,1383	0/0:37,0:37:96.28:0,96,1285	0/0:16,0:16:48.13:0,48,652	0/0:13,0:13:39.13:0,39,538	0/0:33,0:33:93.29:0,93,1282	1/1:1,8:9:24.02:271,24,0	1/1:2,9:11:30.09:351,30,0	1/1:3,21:24:57.15:684,57,0	0/0:18,0:18:48.15:0,48,655	0/0:13,0:13:33.11:0,33,462	0/0:29,0:29:84.21:0,84,1151	0/0:7,0:7:15.05:0,15,210
chr10	100599621	.	C	CTTT	7329.10	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-0.905;DP=578;FS=16.858;HRun=13;HaplotypeScore=96.4384;InbreedingCoeff=0.9016;MQ=72.33;MQ0=1;MQRankSum=-1.215;QD=17.41;ReadPosRankSum=-3.855;VQSLOD=1.0744;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:28:31.14:233,31,0	1/1:3,4:10:14.98:192,15,0	0/0:16,0:14:14.92:0,15,115	0/0:12,0:12:3.81:0,4,41	1/1:10,18:31:55.48:684,55,0	1/1:10,11:25:24.04:339,24,0	1/1:7,8:17:21.03:297,21,0	1/1:17,16:35:58.52:662,59,0	0/0:16,0:17:35.80:0,36,364	0/0:28,0:28:30.84:0,31,347	0/0:13,0:16:29.73:0,30,335	1/1:5,0:16:14.94:114,15,0	0/0:14,0:14:29.88:0,30,323	1/1:3,0:18:17.10:135,17,0	1/1:4,16:24:27.07:395,27,0	1/1:1,11:15:9.03:161,9,0	0/0:12,0:13:16.31:0,16,180	0/0:8,0:11:10.15:0,10,97	1/1:16,10:28:54.12:737,54,0	1/1:9,27:40:99:1371,102,0	1/1:2,4:6:3.01:37,3,0	1/1:5,0:23:43.91:302,44,0	1/1:7,0:21:20.44:144,20,0	1/1:3,0:12:16.19:118,16,0	0/0:25,0:27:42.69:0,43,451	1/1:14,17:35:70.62:870,71,0	1/1:14,15:32:28.90:464,29,0	1/1:3,0:3:6:71,6,0
chr10	100600320	.	AT	A	3638.96	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.497;DP=656;FS=1.635;HRun=8;HaplotypeScore=76.1035;InbreedingCoeff=0.9312;MQ=70.28;MQ0=0;MQRankSum=-0.744;QD=23.18;ReadPosRankSum=1.819;VQSLOD=4.3384;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,35:37:93.15:898,93,0	0/0:13,0:13:39.12:0,39,471	0/0:9,0:9:3.01:0,3,36	0/0:7,0:7:3.01:0,3,36	0/0:29,0:29:78.22:0,78,921	0/0:22,0:22:63.16:0,63,746	0/0:26,0:26:66.16:0,66,762	0/0:27,0:27:66.19:0,66,787	0/0:14,0:14:41.99:0,42,486	0/0:34,0:34:93.29:0,93,1123	0/0:34,0:34:90.28:0,90,1087	1/1:7,24:31:66.05:627,66,0	0/0:22,0:22:63.17:0,63,747	1/1:2,19:21:54.09:521,54,0	0/0:36,0:36:99:0,105,1269	0/0:17,0:17:48.15:0,48,580	0/0:36,0:36:99:0,108,1293	0/0:10,0:10:24.06:0,24,277	0/0:23,0:23:48.15:0,48,579	0/0:22,0:22:57.16:0,57,677	0/0:29,0:29:77.79:0,78,942	1/1:3,25:28:63.10:608,63,0	1/1:4,21:25:59.99:579,60,0	1/1:0,15:15:42.07:406,42,0	0/0:26,0:26:75.22:0,75,894	0/0:31,0:31:81.24:0,81,970	0/0:22,0:22:66.20:0,66,797	0/0:10,0:10:24.06:0,24,278
chr10	100600735	.	G	GT	1285.79	PASS	AB=0.538;AC=15;AF=0.268;AN=56;BaseQRankSum=5.327;DP=500;FS=7.096;HRun=10;HaplotypeScore=123.5211;InbreedingCoeff=0.8481;MQ=77.19;MQ0=0;MQRankSum=-2.994;QD=10.05;ReadPosRankSum=2.071;VQSLOD=2.1945;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,1:13:25.93:152,26,0	0/1:1,6:7:12.61:84,0,13	0/0:14,0:14:25.98:0,26,202	0/0:12,0:13:10.74:0,11,78	0/0:22,0:23:55.92:0,56,444	0/0:26,0:27:61.95:0,62,498	0/0:16,0:16:38.92:0,39,320	0/0:29,0:28:53.88:0,54,443	0/0:20,0:20:56.90:0,57,464	0/0:20,0:21:46.94:0,47,373	0/0:12,1:15:11.06:0,11,275	1/1:4,0:14:22.76:115,23,0	0/0:22,0:23:52.94:0,53,423	1/1:3,0:20:37.10:187,37,0	1/1:5,16:21:36.05:372,36,0	0/0:13,2:15:3.97:0,4,239	0/0:23,0:23:41.85:0,42,336	0/0:13,0:13:38.94:0,39,318	0/0:15,0:15:26.93:0,27,221	0/0:20,0:20:47.68:0,48,379	0/0:7,0:7:14.96:0,15,123	1/1:6,1:21:40.55:240,41,0	1/1:3,2:17:31.19:189,31,0	1/1:2,1:15:25.73:146,26,0	0/0:19,0:20:37.92:0,38,301	0/0:22,0:21:28.13:0,28,349	0/0:18,1:21:3.92:0,4,238	0/0:14,0:14:41.93:0,42,341
chr10	100600926	.	T	TACAC	418.30	PASS	AB=0.722;AC=20;AF=0.455;AN=44;BaseQRankSum=-2.001;DP=312;FS=3.584;HRun=0;HaplotypeScore=88.5623;InbreedingCoeff=0.3502;MQ=59.73;MQ0=11;MQRankSum=0.299;QD=2.88;ReadPosRankSum=0.329;VQSLOD=1.7007;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:2.99:0,3,24	0/0:2,0:4:2.79:0,3,28	./.	./.	1/1:1,0:5:2.40:12,2,0	1/1:19,6:25:3.01:70,3,0	1/1:13,0:11:2.24:69,2,0	1/1:22,0:20:2.50:9,2,0	0/0:6,0:5:2.97:0,3,21	0/0:4,0:4:3.01:0,3,44	0/0:9,0:9:5.75:0,6,57	./.	0/0:9,0:9:5.99:0,6,67	./.	0/0:4,0:9:9.01:0,9,84	0/1:7,2:14:17.95:64,0,18	0/0:23,0:21:5.97:0,6,65	0/0:17,0:16:3.90:0,4,132	1/1:16,0:15:6.02:94,6,0	1/1:6,2:8:3.01:70,3,0	1/1:14,0:13:2.96:19,3,0	0/0:6,0:13:3:0,3,28	./.	0/0:13,0:18:6:0,6,52	0/1:5,0:7:2.28:7,0,2	1/1:11,0:11:5.89:37,6,0	1/1:9,0:9:6.02:104,6,0	./.
chr10	100601233	.	TTCTTCTTCTTCATG	T	889.17	PASS	AB=1.000;AC=26;AF=0.565;AN=46;BaseQRankSum=-4.348;DP=215;FS=12.252;HRun=0;HaplotypeScore=48.8888;InbreedingCoeff=0.0567;MQ=41.44;MQ0=29;MQRankSum=-1.291;QD=7.54;ReadPosRankSum=-2.282;VQSLOD=-0.3342;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:2:2.92:0,3,17	./.	0/0:29,0:4:4.99:0,5,75	0/0:22,0:4:8.68:0,9,71	./.	1/1:11,0:10:1.07:61,1,0	0/1:7,0:5:23.16:23,0,62	./.	0/1:6,0:4:40.66:41,0,59	0/1:23,0:12:90.94:178,0,91	0/1:20,0:11:93.01:93,0,114	0/0:4,0:4:3.03:0,3,107	0/1:5,0:5:38.53:39,0,42	0/0:7,0:3:2.50:0,2,9	./.	1/1:4,0:3:3.01:44,3,0	0/1:9,0:5:13.83:14,0,105	0/0:2,0:1:3.01:0,3,100	1/1:9,0:4:9:127,9,0	./.	1/1:3,0:2:5.96:44,6,0	0/0:7,0:6:0.80:0,1,51	1/1:3,0:3:5.38:41,5,0	1/1:4,0:4:8.85:63,9,0	1/1:3,0:1:2.99:23,3,0	1/1:3,0:3:3.48:59,3,0	1/1:6,0:5:6.02:159,6,0	1/1:2,0:1:2.98:21,3,0
chr10	100601236	.	TTCTTCTTCATG	T	1367.50	PASS	AB=1.000;AC=33;AF=0.717;AN=46;BaseQRankSum=-4.024;DP=224;FS=24.992;HRun=0;HaplotypeScore=43.2155;InbreedingCoeff=-0.0163;MQ=40.66;MQ0=29;MQRankSum=-2.225;QD=9.70;ReadPosRankSum=-2.008;VQSLOD=-0.5460;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:2:1.55:4,2,0	./.	0/0:35,0:4:5.33:0,5,75	0/0:25,0:4:8.36:0,8,54	./.	1/1:11,0:10:11.40:133,11,0	0/1:8,0:6:48.18:48,0,63	./.	0/1:6,0:4:9.64:82,0,10	0/1:23,0:12:36.29:198,0,36	0/1:20,0:11:92.15:126,0,92	0/1:4,0:4:16.74:17,0,32	1/1:5,0:5:4.83:67,5,0	1/1:7,0:3:2.74:12,3,0	./.	1/1:4,0:3:3.01:63,3,0	0/1:9,0:5:31.43:31,0,34	0/0:2,0:1:3.01:0,3,62	1/1:9,0:4:9.02:168,9,0	./.	1/1:3,0:2:6.01:63,6,0	0/1:7,0:6:5.83:24,0,6	1/1:3,0:3:6:58,6,0	1/1:4,0:4:8.68:72,9,0	1/1:3,0:1:3.01:40,3,0	1/1:0,3:3:3.48:62,3,0	1/1:1,5:5:6.02:195,6,0	1/1:2,0:1:3.01:40,3,0
chr10	100601239	.	TTCTTCATG	T	1976.31	PASS	AB=1.000;AC=37;AF=0.804;AN=46;BaseQRankSum=-3.286;DP=228;FS=25.116;HRun=0;HaplotypeScore=37.0554;InbreedingCoeff=0.1727;MQ=40.58;MQ0=29;MQRankSum=-2.525;QD=13.92;ReadPosRankSum=-0.553;VQSLOD=0.4710;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:2:2.99:24,3,0	./.	0/0:37,0:4:5.54:0,6,76	0/0:27,0:4:7.03:0,7,50	./.	1/1:10,0:10:12.04:219,12,0	0/1:8,0:6:32.30:83,0,32	./.	1/1:6,0:4:11.95:146,12,0	0/1:23,0:12:28.82:249,0,29	0/1:20,0:11:73.31:157,0,73	1/1:4,0:4:5.90:63,6,0	1/1:3,2:5:6:103,6,0	1/1:7,0:3:3.01:30,3,0	./.	1/1:1,3:3:3.01:81,3,0	1/1:9,0:5:7.77:79,8,0	0/0:2,0:1:2.88:0,3,15	1/1:10,0:4:9.02:166,9,0	./.	1/1:3,0:2:5.95:65,6,0	1/1:8,0:7:11.98:139,12,0	1/1:3,0:3:6.02:83,6,0	1/1:4,0:4:8.76:90,9,0	1/1:3,0:1:3.01:56,3,0	1/1:3,0:3:3.48:62,3,0	1/1:6,0:5:6.02:156,6,0	1/1:2,0:1:3.01:57,3,0
chr10	100601242	.	TTCATG	T	2448.94	PASS	AB=0.948;AC=40;AF=0.870;AN=46;BaseQRankSum=-2.801;DP=226;FS=25.995;HRun=0;HaplotypeScore=29.7797;InbreedingCoeff=0.0535;MQ=41.19;MQ0=28;MQRankSum=-2.043;QD=14.32;ReadPosRankSum=-0.490;VQSLOD=1.1227;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:2:3.01:44,3,0	./.	0/0:38,0:4:5.56:0,6,67	0/1:27,0:4:0.76:1,0,40	./.	1/1:1,9:10:12.04:240,12,0	0/1:8,0:6:20.56:86,0,21	./.	1/1:6,0:4:12.04:203,12,0	0/1:17,6:12:16.44:286,0,16	0/1:20,0:11:56.66:173,0,57	1/1:6,0:5:12.04:203,12,0	1/1:4,0:4:6.02:102,6,0	1/1:7,0:3:3.01:46,3,0	./.	1/1:4,0:3:3.01:61,3,0	1/1:9,0:5:9.02:127,9,0	1/1:2,0:1:2.99:24,3,0	1/1:7,1:3:9.02:146,9,0	./.	1/1:3,0:2:6.02:81,6,0	1/1:4,4:7:12.04:192,12,0	1/1:2,1:3:6.02:102,6,0	1/1:4,0:4:8.87:99,9,0	1/1:4,0:2:6.02:114,6,0	1/1:3,0:3:3.48:62,3,0	1/1:6,0:5:6.02:117,6,0	1/1:2,0:1:3.01:59,3,0
chr10	100601823	.	A	AT	2976.10	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-9.390;DP=600;FS=1.866;HRun=8;HaplotypeScore=53.7878;InbreedingCoeff=0.9092;MQ=77.16;MQ0=0;MQRankSum=-2.669;QD=23.25;ReadPosRankSum=2.021;VQSLOD=4.3591;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:54.16:623,54,0	0/0:11,0:11:30.02:0,30,275	0/1:22,0:21:9.01:9,0,186	0/0:16,0:16:35.01:0,35,300	0/0:29,0:29:72:0,72,648	0/0:41,0:41:99:0,114,1035	0/0:23,0:23:65.96:0,66,584	0/0:47,0:47:99:0,104,1043	0/0:10,0:10:27.01:0,27,247	0/0:22,0:22:60.02:0,60,549	0/0:23,0:23:62.78:0,63,561	1/1:0,21:21:57.17:658,57,0	0/0:18,0:18:50.98:0,51,456	1/1:1,24:25:69.20:795,69,0	0/0:20,0:20:48:0,48,435	0/0:17,0:17:48.03:0,48,439	0/0:16,0:16:45.02:0,45,412	0/0:20,0:20:56.92:0,57,500	0/0:16,0:16:41.98:0,42,373	0/0:23,0:23:62.92:0,63,548	0/0:14,0:14:39.02:0,39,357	1/1:1,7:8:21.04:231,21,0	1/1:0,13:13:39.07:435,39,0	1/1:1,13:14:36.11:415,36,0	0/0:33,0:33:87.02:0,87,788	0/0:32,0:32:87.01:0,87,787	0/0:28,0:28:78.04:0,78,714	0/0:12,0:12:30.01:0,30,275
chr10	100602064	.	A	AT	940.25	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.325;DP=587;FS=3.485;HRun=6;HaplotypeScore=55.1481;InbreedingCoeff=0.9784;MQ=75.62;MQ0=0;MQRankSum=0.572;QD=31.34;ReadPosRankSum=0.714;VQSLOD=4.1996;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:36.08:0,36,367	1/1:1,4:5:12.04:151,12,0	0/0:15,0:15:29.84:0,30,299	0/0:15,0:14:20.04:0,20,244	0/0:27,0:27:72.14:0,72,727	0/0:23,0:23:63.14:0,63,643	0/0:10,0:10:30.07:0,30,306	0/0:38,0:38:93.20:0,93,944	0/0:14,0:14:39.09:0,39,398	0/0:23,0:23:48.10:0,48,489	0/0:37,0:37:99:0,108,1102	0/0:23,0:23:66.13:0,66,666	0/0:21,0:21:57.11:0,57,575	0/0:19,0:19:54.12:0,54,551	1/1:1,24:25:72.23:906,72,0	0/0:15,0:15:42.09:0,42,429	0/0:21,0:21:51.11:0,51,520	0/0:20,0:20:45.07:0,45,450	0/0:23,0:23:60.13:0,60,612	0/0:28,0:28:75.15:0,75,758	0/0:14,0:14:33.07:0,33,337	0/0:17,0:17:45.10:0,45,459	0/0:22,0:22:63.14:0,63,643	0/0:8,0:8:21.05:0,21,214	0/0:30,0:30:72.16:0,72,735	0/0:32,0:32:78.17:0,78,796	0/0:30,0:30:78.17:0,78,795	0/0:17,0:17:45.10:0,45,459
chr10	100603470	.	AAC	A	7264.59	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.469;DP=765;FS=3.194;HRun=0;HaplotypeScore=85.5840;InbreedingCoeff=0.9992;MQ=71.50;MQ0=0;MQRankSum=-2.411;QD=37.64;ReadPosRankSum=3.530;VQSLOD=7.1548;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:66.22:946,66,0	1/1:0,14:14:36.12:516,36,0	0/0:19,0:19:57.14:0,57,980	0/0:16,0:16:36.12:0,36,629	0/0:43,0:43:99:0,126,2292	0/0:28,0:28:75.26:0,75,1365	0/0:13,0:13:30.10:0,30,550	0/0:32,0:32:93.29:0,93,1593	0/0:24,0:24:69.24:0,69,1253	0/0:35,0:35:93.28:0,93,1609	0/0:29,0:29:87.30:0,87,1594	1/1:1,26:27:72.24:1032,72,0	0/0:33,0:33:96.33:0,96,1745	1/1:0,22:22:54.18:774,54,0	1/1:2,26:28:69.23:989,69,0	0/0:36,0:36:99:0,105,1920	0/0:21,0:21:57.20:0,57,1044	0/0:23,0:23:60.21:0,60,1084	0/0:22,0:22:60.19:0,60,1065	0/0:41,0:41:99:0,120,2109	0/0:22,0:22:66.23:0,66,1199	1/1:0,34:34:99:1419,99,0	1/1:2,30:32:90.30:1289,90,0	1/1:1,8:9:21.07:301,21,0	0/0:48,0:48:99:0,138,2499	0/0:31,0:31:93.32:0,93,1701	0/0:32,0:32:96.31:0,96,1717	0/0:24,0:24:72.22:0,72,1268
chr10	100604135	.	C	CA	8933.72	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-2.383;DP=299;FS=5.266;HRun=4;HaplotypeScore=50.8596;InbreedingCoeff=0.5650;MQ=52.17;MQ0=4;MQRankSum=-2.417;QD=29.98;ReadPosRankSum=0.501;VQSLOD=4.7995;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:8:21.07:287,21,0	1/1:1,3:4:6.02:82,6,0	0/1:3,0:3:0.41:0,0,22	0/0:1,0:1:3.01:0,3,34	1/1:3,16:19:35.15:450,35,0	1/1:1,14:15:33.11:451,33,0	1/1:1,5:5:9.03:123,9,0	1/1:3,17:20:51.16:681,51,0	1/1:0,6:6:18.06:246,18,0	1/1:2,13:15:39.13:533,39,0	1/1:3,16:19:35.93:485,36,0	1/1:0,11:11:33.11:451,33,0	1/1:3,7:10:21.06:273,21,0	1/1:1,11:12:27.09:367,27,0	1/1:0,7:7:18.06:246,18,0	1/1:1,7:8:14.94:205,15,0	1/1:2,5:6:15.05:205,15,0	1/1:0,5:5:9.03:123,9,0	1/1:3,9:12:27.09:367,27,0	1/1:4,15:19:48.03:652,48,0	1/1:0,5:5:9.03:123,9,0	1/1:2,8:10:24.05:328,24,0	1/1:1,6:7:18.06:246,18,0	1/1:0,7:7:15.05:205,15,0	1/1:3,16:19:42.14:574,42,0	1/1:4,10:13:30.10:410,30,0	1/1:2,14:16:33.11:451,33,0	1/1:4,9:12:27.09:370,27,0
chr10	100606697	.	A	AT	656.27	PASS	AB=0.786;AC=11;AF=0.196;AN=56;BaseQRankSum=7.129;DP=392;FS=44.949;HRun=0;HaplotypeScore=101.9415;InbreedingCoeff=-0.2521;MQ=66.18;MQ0=0;MQRankSum=-6.144;QD=3.71;ReadPosRankSum=4.048;VQSLOD=1.4116;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:41.78:0,42,377	0/0:4,1:5:11.91:0,12,102	0/0:13,0:8:18.95:0,19,370	0/0:7,0:4:21.03:0,21,262	0/0:21,1:22:36.51:0,37,324	0/1:19,6:25:13.54:14,0,394	0/0:7,1:8:6.68:0,7,158	0/1:13,9:22:99:349,0,424	0/1:3,3:6:27.49:27,0,40	0/0:13,0:13:36.11:0,36,485	0/1:12,3:15:2.05:2,0,176	0/0:13,1:14:38.61:0,39,281	0/0:16,3:19:26.24:0,26,406	0/0:15,3:18:16.83:0,17,308	0/0:15,3:18:5.63:0,6,391	0/1:11,3:14:10.85:11,0,253	0/0:7,1:8:7.99:0,8,147	0/0:8,0:8:15.05:0,15,209	0/1:11,1:12:16.41:16,0,347	0/0:17,1:18:35.69:0,36,372	0/0:3,0:3:8.99:0,9,104	0/1:10,5:15:17.60:18,0,195	0/1:16,5:21:13.15:13,0,218	0/0:12,0:12:11.45:0,11,78	0/0:11,1:12:15.99:0,16,250	0/1:15,3:18:87.74:88,0,515	0/1:12,10:22:99:183,0,325	0/1:5,2:7:68.78:77,0,69
chr10	100607782	.	T	TC	1282.90	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.002;DP=601;FS=0.000;HRun=5;HaplotypeScore=65.5058;InbreedingCoeff=0.9993;MQ=78.03;MQ0=0;MQRankSum=-1.562;QD=35.64;ReadPosRankSum=1.636;VQSLOD=3.6528;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:57.13:0,57,604	1/1:1,9:10:30.08:379,30,0	0/0:18,0:18:39.33:0,39,404	0/0:17,0:18:36.76:0,37,379	0/0:23,0:23:60.15:0,60,644	0/0:23,0:23:57.14:0,57,612	0/0:20,0:20:57.14:0,57,612	0/0:40,0:40:99:0,111,1186	0/0:19,0:19:57.12:0,57,603	0/0:36,0:36:96.22:0,96,1016	0/0:32,0:32:90.22:0,90,963	0/0:20,0:20:54.13:0,54,579	0/0:21,0:21:57.12:0,57,604	0/0:14,0:14:36.09:0,36,386	1/1:0,26:26:78.25:1025,78,0	0/0:24,0:24:69.16:0,69,732	0/0:15,0:15:36.09:0,36,387	0/0:17,0:17:45.08:0,45,472	0/0:21,0:21:54.14:0,54,580	0/0:27,0:27:72.16:0,72,765	0/0:18,0:18:54.14:0,54,580	0/0:15,0:15:42.11:0,42,451	0/0:17,0:17:48.11:0,48,509	0/0:18,0:18:42.10:0,42,451	0/0:29,0:29:81.20:0,81,870	0/0:23,0:23:60.14:0,60,637	0/0:21,0:21:57.14:0,57,612	0/0:13,0:13:33.08:0,33,355
chr10	100609676	.	TCCCTTCCCTTCCCTTCCCTTCCTTTCCCTTC	T	3072.65	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=8.030;DP=392;FS=45.591;HRun=0;HaplotypeScore=231.2049;InbreedingCoeff=0.6619;MQ=42.23;MQ0=55;MQRankSum=-7.074;QD=24.78;ReadPosRankSum=1.215;VQSLOD=1.4381;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,16:17:5.05:230,5,0	0/1:9,0:9:5.84:6,0,953	./.	0/1:17,0:1:0:0,0,0	0/0:11,0:10:22.18:0,22,790	0/0:10,0:8:17.46:0,17,606	0/0:15,0:11:28.65:0,29,898	0/0:24,0:17:42.03:0,42,750	0/0:7,0:6:13.86:0,14,424	0/0:18,0:15:36.36:0,36,1992	0/0:14,0:12:31.64:0,32,1674	1/1:24,0:22:3.01:131,3,0	0/0:12,0:7:19.98:0,20,549	1/1:9,0:12:33.11:1090,33,0	0/1:19,0:18:99:268,0,667	0/0:14,0:11:28.91:0,29,1399	0/0:16,0:16:13.67:0,14,1074	0/0:14,0:13:35.20:0,35,1393	0/0:15,0:6:17.94:0,18,359	0/0:18,0:17:43.69:0,44,2267	0/0:16,0:14:39.12:0,39,1395	1/1:6,0:15:39.13:978,39,0	1/1:3,0:5:15.05:530,15,0	0/0:8,14:20:5.85:0,6,153	0/0:10,0:9:24.44:0,24,1689	0/0:16,0:9:27.09:0,27,1169	0/0:6,0:6:18.06:0,18,715	0/0:3,0:2:6.02:0,6,462
chr10	100609694	.	CTTCCT	C	4900.05	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=-2.264;DP=384;FS=0.000;HRun=0;HaplotypeScore=78.9219;InbreedingCoeff=-0.0224;MQ=49.67;MQ0=34;MQRankSum=2.518;QD=13.46;ReadPosRankSum=2.030;VQSLOD=3.4949;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:19:13.08:13,0,14	0/1:5,0:5:30.06:58,0,30	0/1:25,0:7:20.45:56,0,20	0/1:31,0:6:3.15:19,0,3	1/1:10,0:9:23.86:238,24,0	1/1:14,0:13:32.93:278,33,0	1/1:11,0:7:17.76:135,18,0	1/1:9,6:13:10.50:143,10,0	1/1:7,0:6:12.86:100,13,0	0/1:16,0:15:0.36:161,0,0	0/1:12,0:10:57.49:115,0,57	1/1:23,0:22:2.50:9,2,0	1/1:12,0:9:23.90:190,24,0	1/1:7,0:7:20.58:126,21,0	1/1:17,0:17:5.97:314,6,0	1/1:14,0:11:35.81:378,36,0	1/1:13,0:13:23.09:221,23,0	1/1:14,0:14:34.08:240,34,0	0/1:13,0:7:22.96:102,0,23	1/1:16,1:16:45.04:547,45,0	1/1:16,0:16:48:457,48,0	1/1:8,0:8:20.72:137,21,0	1/1:9,0:9:26.70:185,27,0	0/0:20,0:17:2.88:0,3,18	0/1:13,0:12:15.98:154,0,16	1/1:10,1:9:27:270,27,0	1/1:7,0:7:20.98:205,21,0	1/1:2,0:2:5.99:49,6,0
chr10	100609706	.	TC	T	915.42	PASS	AB=1.000;AC=10;AF=0.185;AN=54;BaseQRankSum=8.336;DP=402;FS=18.417;HRun=3;HaplotypeScore=79.1784;InbreedingCoeff=0.6627;MQ=60.01;MQ0=18;MQRankSum=-6.585;QD=8.17;ReadPosRankSum=1.148;VQSLOD=-0.1439;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:19:10.22:29,0,10	0/0:3,0:3:9.03:0,9,126	0/1:33,0:12:3.96:4,0,185	0/0:40,0:10:23.98:0,24,255	0/0:15,0:14:23.47:0,23,385	0/0:14,0:13:33.09:0,33,468	0/0:10,0:10:28.31:0,28,352	0/0:13,0:12:32.99:0,33,411	0/0:9,0:8:18.06:0,18,259	0/0:17,0:17:51.17:0,51,733	0/0:9,0:9:27.09:0,27,388	1/1:22,0:22:3.01:37,3,0	0/0:12,0:10:27.09:0,27,382	1/1:0,9:9:21.07:259,21,0	0/0:16,0:16:32.86:0,33,469	0/0:12,0:11:22.38:0,22,398	0/0:16,0:16:39.11:0,39,539	0/0:13,0:13:21.90:0,22,470	0/0:9,0:5:12.02:0,12,190	0/0:15,0:14:10.32:0,10,439	0/0:17,0:17:48.16:0,48,672	1/1:1,10:11:24.08:296,24,0	1/1:0,17:17:36:444,36,0	0/0:16,0:16:0.45:0,0,10	0/0:13,0:13:39.09:0,39,521	0/0:12,0:11:8.97:0,9,320	0/0:7,0:7:21.07:0,21,293	./.
chr10	100609760	.	C	CATCT	7011.16	PASS	AB=0.628;AC=27;AF=0.519;AN=52;BaseQRankSum=-9.145;DP=537;FS=6.476;HRun=0;HaplotypeScore=106.6283;InbreedingCoeff=0.6677;MQ=60.64;MQ0=9;MQRankSum=2.212;QD=23.22;ReadPosRankSum=-1.069;VQSLOD=4.0921;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:21:29.18:0,29,399	1/1:3,0:3:6:52,6,0	./.	./.	1/1:6,19:25:35.92:659,36,0	1/1:8,13:22:27.09:639,27,0	1/1:7,8:15:12.04:284,12,0	1/1:28,0:24:11.94:104,12,0	1/1:5,12:17:1.12:474,1,0	0/0:17,0:17:36.10:0,36,523	0/0:16,0:16:39.13:0,39,596	0/0:12,0:25:40.92:0,41,355	1/1:7,11:18:21.07:496,21,0	0/0:7,0:13:20.87:0,21,176	1/1:23,0:23:38.99:338,39,0	0/0:17,0:16:30.10:0,30,468	0/1:13,15:30:19.83:511,0,20	0/0:17,0:18:3.46:0,3,448	1/1:10,4:13:15.02:262,15,0	1/1:8,19:26:51.11:1121,51,0	1/1:13,13:25:27.09:639,27,0	0/0:7,0:15:10.50:0,11,76	0/0:16,0:24:23.99:0,24,224	0/0:6,0:11:12.01:0,12,112	0/0:26,0:27:60.17:0,60,869	0/1:8,9:17:16.81:505,0,17	0/1:9,19:29:4.78:857,0,5	1/1:1,5:6:3.01:71,3,0
chr10	100609792	.	T	TATC	2363.47	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=6.916;DP=571;FS=3.122;HRun=0;HaplotypeScore=108.2414;InbreedingCoeff=-0.0788;MQ=57.92;MQ0=11;MQRankSum=2.718;QD=8.32;ReadPosRankSum=9.125;VQSLOD=2.0498;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:44.92:0,45,726	1/1:0,7:7:9.03:178,9,0	0/0:14,0:8:21.07:0,21,321	0/0:3,0:1:3.01:0,3,46	0/1:24,0:24:99:133,0,278	0/1:22,0:22:99:159,0,273	0/1:13,0:12:70.94:71,0,117	0/0:25,0:21:53.37:0,53,748	0/1:21,0:21:99:116,0,325	0/0:23,0:23:69.23:0,69,1087	0/0:23,0:23:60.20:0,60,971	0/0:28,0:28:57.08:0,57,609	0/1:18,0:18:99:125,0,193	0/0:15,0:15:24.03:0,24,238	1/1:1,24:25:39.13:884,39,0	0/0:20,0:20:57.18:0,57,889	0/1:27,0:27:99:114,0,162	0/0:21,0:21:43.23:0,43,898	0/1:13,0:11:38.93:39,0,240	0/1:31,0:30:99:258,0,503	0/1:20,0:19:99:159,0,228	0/0:13,0:13:30.05:0,30,345	0/0:25,0:25:60.09:0,60,720	0/0:14,0:14:30.03:0,30,349	0/0:38,0:38:99:0,111,1757	0/1:23,0:23:66.70:67,0,519	0/1:30,0:30:99:216,0,308	0/1:10,0:8:13.97:14,0,83
chr10	100611169	.	AT	A	2575.06	PASS	AB=0.923;AC=13;AF=0.232;AN=56;BaseQRankSum=13.966;DP=656;FS=2.631;HRun=11;HaplotypeScore=79.2621;InbreedingCoeff=0.8411;MQ=77.66;MQ0=0;MQRankSum=0.692;QD=17.17;ReadPosRankSum=1.820;VQSLOD=4.7071;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:53.93:443,54,0	0/0:8,1:10:2.26:0,2,213	0/1:11,1:12:17.55:18,0,124	0/0:16,0:16:20.87:0,21,176	0/0:31,2:33:37.91:0,38,800	0/0:25,1:26:47.54:0,48,711	0/0:15,0:15:30.08:0,30,320	0/0:36,1:37:62.57:0,63,871	0/0:25,1:28:44.36:0,44,661	0/0:30,1:31:44.53:0,45,679	0/0:28,3:31:4.44:0,4,644	1/1:4,18:23:52.96:425,53,0	0/0:22,1:23:41.52:0,42,641	1/1:1,19:20:56.93:468,57,0	0/0:31,0:31:87.20:0,87,913	0/0:22,2:24:29.48:0,29,511	0/0:22,1:23:38.48:0,38,600	0/0:16,0:16:39.10:0,39,416	0/0:19,0:19:42.11:0,42,448	0/0:31,0:31:87.22:0,87,928	0/0:16,0:15:48.12:0,48,512	1/1:1,28:29:74.90:616,75,0	1/1:5,15:21:43.98:351,44,0	1/1:3,18:21:53.92:443,54,0	0/0:21,0:22:57.10:0,57,590	0/0:36,0:36:90.19:0,90,930	0/0:30,1:31:56.41:0,56,766	0/0:7,0:7:21.04:0,21,216
chr10	100612499	.	T	TTGTGTGTG	2551.53	PASS	AB=0.802;AC=24;AF=0.462;AN=52;BaseQRankSum=-2.138;DP=750;FS=9.170;HRun=0;HaplotypeScore=191.9466;InbreedingCoeff=0.3824;MQ=55.78;MQ0=12;MQRankSum=-4.032;QD=6.09;ReadPosRankSum=-3.804;VQSLOD=1.0646;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:37:20.03:366,20,0	1/1:2,1:10:15.02:278,15,0	0/0:35,0:11:3.01:0,3,30	./.	0/1:18,0:33:14.12:14,0,85	0/0:13,0:25:15.89:0,16,73	0/0:14,0:25:3.78:0,4,102	1/1:38,0:38:28.79:196,29,0	0/0:23,0:24:34.20:0,34,568	0/1:26,0:25:25.87:26,0,409	0/0:15,0:17:23.18:0,23,396	1/1:8,16:25:15.05:511,15,0	0/0:19,0:19:3.98:0,4,374	1/1:11,11:25:9.03:336,9,0	./.	1/1:17,0:24:13.25:234,13,0	0/0:33,0:36:42.08:0,42,1101	0/0:23,0:23:23.15:0,23,492	0/1:26,0:26:49.16:110,0,49	0/1:13,0:21:9.80:10,0,47	0/1:21,0:46:27.33:27,0,98	1/1:32,0:34:26.71:317,27,0	1/1:10,13:26:5.86:105,6,0	1/1:6,10:17:3.01:123,3,0	0/0:37,0:37:4.57:0,5,907	0/1:19,0:27:83.27:83,0,162	0/0:17,0:21:15.55:0,16,255	0/0:4,0:9:8.17:0,8,39
chr10	100612586	.	G	GTTTT	1797.99	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.443;DP=571;FS=3.747;HRun=4;HaplotypeScore=93.9143;InbreedingCoeff=0.9969;MQ=89.82;MQ0=1;MQRankSum=-3.204;QD=69.15;ReadPosRankSum=0.648;VQSLOD=3.1292;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.32:0,96,1637	1/1:1,6:8:21.07:520,21,0	0/0:19,0:19:54.18:0,54,907	0/0:29,0:29:66.24:0,66,1226	0/0:22,0:22:60.19:0,60,1013	0/0:25,0:25:63.20:0,63,1065	0/0:21,0:21:63.22:0,63,1085	0/0:35,0:35:99:0,99,1626	0/0:24,0:24:60.16:0,60,979	0/0:19,0:19:54.18:0,54,936	0/0:11,0:11:33.09:0,33,519	0/0:10,0:10:27.09:0,27,468	0/0:18,0:18:51.17:0,51,879	0/0:18,0:18:48.16:0,48,832	1/1:1,17:18:54.18:1399,54,0	0/0:21,0:21:60.19:0,60,993	0/0:27,0:27:72.17:0,72,1154	0/0:16,0:16:48.15:0,48,792	0/0:25,0:25:63.68:0,64,1075	0/0:24,0:24:72.23:0,72,1204	0/0:22,0:22:57.17:0,57,960	0/0:10,0:10:30.10:0,30,518	0/0:23,0:23:54.18:0,54,931	0/0:15,0:15:39.09:0,39,644	0/0:20,0:20:57.18:0,57,939	0/0:21,0:21:63.22:0,63,1085	0/0:22,0:21:60.20:0,60,1025	0/0:13,0:13:36.12:0,36,610
chr10	100613489	.	AG	A	6412.40	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.058;DP=763;FS=2.794;HRun=1;HaplotypeScore=73.0471;InbreedingCoeff=0.9952;MQ=86.40;MQ0=0;MQRankSum=-3.352;QD=38.63;ReadPosRankSum=3.697;VQSLOD=5.6226;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:99:1426,102,0	0/0:6,0:6:15.05:0,15,237	0/0:21,0:21:63.19:0,63,974	0/0:29,0:29:87.29:0,87,1357	0/0:33,0:33:99:0,99,1577	0/0:36,0:36:99:0,105,1674	0/0:19,0:19:57.19:0,57,911	0/0:37,0:37:99:0,111,1739	0/0:24,0:24:72.25:0,72,1142	0/0:31,0:31:90.30:0,90,1419	0/0:30,0:30:90.31:0,90,1439	1/1:0,32:32:90.30:1253,90,0	0/0:29,0:29:87.28:0,87,1368	1/1:0,25:25:63.21:880,63,0	0/0:36,0:36:99:0,108,1698	0/0:32,0:32:96.33:0,96,1535	0/0:33,0:33:99:0,99,1553	0/0:13,0:13:39.13:0,39,624	0/0:17,0:17:51.17:0,51,815	0/0:38,0:38:99:0,108,1721	0/0:23,0:23:69.24:0,69,1103	1/1:0,24:24:69.23:965,69,0	1/1:1,19:20:57.19:797,57,0	1/1:0,28:28:78.26:1091,78,0	0/0:31,0:31:90.29:0,90,1414	0/0:30,0:30:87.30:0,87,1391	0/0:43,0:43:99:0,126,1989	0/0:6,0:6:18.06:0,18,288
chr10	100614462	.	G	GCC	738.99	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=6.302;DP=247;FS=1.763;HRun=9;HaplotypeScore=35.1697;InbreedingCoeff=0.7615;MQ=70.51;MQ0=0;MQRankSum=-0.715;QD=12.96;ReadPosRankSum=-1.554;VQSLOD=-0.2796;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,9:16:17.85:276,18,0	0/0:6,0:6:18.05:0,18,192	0/0:9,0:7:8.65:0,9,80	0/1:5,0:5:0.01:0,0,27	0/0:12,0:12:36.09:0,36,382	0/0:10,0:10:21.04:0,21,223	0/0:7,0:7:21.05:0,21,224	0/0:19,0:19:23.98:0,24,255	0/0:9,0:9:21.03:0,21,223	0/1:9,0:9:2.18:2,0,192	0/0:11,0:11:30.06:0,30,319	1/1:1,2:3:6.02:92,6,0	0/0:8,0:8:8.96:0,9,96	1/1:2,4:6:12.04:185,12,0	0/0:3,0:3:9.02:0,9,96	1/1:1,0:4:7.49:26,7,0	0/0:22,0:22:54.04:0,54,564	0/0:11,0:11:17.56:0,18,169	0/0:11,0:11:27.05:0,27,287	0/0:9,0:9:15:0,15,160	0/0:7,0:7:18.03:0,18,192	1/1:0,3:3:6.02:92,6,0	1/1:3,3:7:11.53:147,12,0	1/1:0,4:3:6.02:92,6,0	0/0:12,0:12:30.05:0,30,319	0/0:10,0:10:17.99:0,18,191	0/0:11,0:11:27.03:0,27,283	0/0:3,0:3:9.02:0,9,96
chr10	100615891	.	G	GAGA	12733.43	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=18.805;DP=773;FS=1.699;HRun=0;HaplotypeScore=136.7485;InbreedingCoeff=0.9949;MQ=73.20;MQ0=0;MQRankSum=-4.688;QD=51.55;ReadPosRankSum=5.172;VQSLOD=6.5396;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,43:46:99:2243,103,0	1/1:1,10:11:33.08:687,33,0	0/0:30,0:30:84.10:0,84,1373	0/0:22,0:22:59.74:0,60,1074	0/0:29,0:29:87.28:0,87,1582	0/0:26,0:26:78.27:0,78,1454	0/0:21,0:21:63.22:0,63,1175	0/0:31,0:31:90.30:0,90,1646	0/0:25,1:26:13.47:0,13,1333	0/0:21,0:21:63.19:0,63,1082	0/0:25,0:25:75.25:0,75,1357	1/1:0,34:36:86.60:1972,87,0	0/0:28,0:28:81.28:0,81,1504	1/1:0,17:20:42.51:981,43,0	1/1:0,47:52:99:2615,117,0	0/0:22,0:22:66.23:0,66,1223	0/0:25,0:25:72.25:0,72,1342	0/0:26,0:26:78.16:0,78,1412	0/0:19,0:19:51.16:0,51,920	0/0:30,0:30:90.28:0,90,1611	0/0:49,0:49:99:0,144,2625	1/1:0,24:29:72.44:1491,72,0	1/1:0,22:26:56.09:1239,56,0	1/1:0,27:27:69.24:1505,69,0	0/0:30,0:29:90.31:0,90,1659	0/0:29,0:29:87.28:0,87,1554	0/0:31,0:30:93.27:0,93,1612	0/0:6,0:6:18.06:0,18,335
chr10	100616852	.	CCACACCCACACA	C	595.71	PASS	AB=0.869;AC=9;AF=0.173;AN=52;BaseQRankSum=2.659;DP=506;FS=11.286;HRun=0;HaplotypeScore=141.7734;InbreedingCoeff=0.5542;MQ=49.76;MQ0=47;MQRankSum=-0.853;QD=3.97;ReadPosRankSum=-1.720;VQSLOD=1.9555;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,4:31:39.94:410,40,0	0/0:7,0:7:18:0,18,434	0/1:28,0:12:10.91:11,0,82	0/1:35,0:14:5.08:5,0,119	0/0:10,0:6:11.86:0,12,322	0/0:19,0:18:38.80:0,39,1088	0/0:25,0:23:50.78:0,51,1200	0/0:22,0:17:42.04:0,42,455	0/0:9,0:8:15.48:0,15,504	0/0:23,0:19:41.15:0,41,1611	0/0:7,0:6:12.03:0,12,366	1/1:6,2:8:8.69:130,9,0	0/0:11,0:11:29.95:0,30,702	0/1:6,11:15:3.66:169,0,4	0/0:16,0:15:44.03:0,44,1176	0/0:13,0:13:35.89:0,36,1152	0/0:33,0:31:78.03:0,78,2032	0/0:22,0:21:50.99:0,51,1527	0/0:14,0:9:25.81:0,26,414	0/0:16,0:14:33.37:0,33,628	0/0:49,0:46:98.77:0,99,3187	./.	./.	1/1:2,27:29:0.47:1,0,0	0/0:18,0:17:33.96:0,34,897	0/0:15,0:12:30.02:0,30,728	0/0:10,0:8:23.68:0,24,554	0/0:5,0:5:12.01:0,12,432
chr10	100619631	.	AGTGTGTGT	A	1520.24	PASS	AB=0.809;AC=11;AF=0.204;AN=54;BaseQRankSum=6.356;DP=794;FS=13.345;HRun=0;HaplotypeScore=197.4895;InbreedingCoeff=0.7312;MQ=62.64;MQ0=29;MQRankSum=-7.295;QD=7.49;ReadPosRankSum=0.664;VQSLOD=1.9095;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,12:55:11.04:175,0,11	0/0:10,0:10:9.03:0,9,214	0/0:71,0:26:1.82:0,2,5	./.	0/0:16,0:25:18.06:0,18,472	0/0:26,0:26:21.07:0,21,560	0/0:23,0:24:14.05:0,14,256	0/0:30,0:29:29.21:0,29,490	0/0:19,0:19:28.91:0,29,808	0/0:19,0:17:29.71:0,30,661	0/0:20,0:20:27.08:0,27,698	1/1:22,0:31:5.80:32,6,0	0/0:33,0:33:42.62:0,43,1186	1/1:17,12:30:27.09:634,27,0	0/0:23,0:23:8.86:0,9,217	0/0:8,0:16:29.72:0,30,872	0/0:27,0:29:45.81:0,46,1264	0/0:24,0:24:45.11:0,45,1318	0/0:21,0:22:23.11:0,23,568	0/0:20,0:28:24.07:0,24,665	0/0:33,0:33:45.14:0,45,1170	1/1:18,11:27:11.76:194,12,0	1/1:12,8:22:10.10:360,10,0	1/1:20,13:34:1.35:280,1,0	0/0:20,0:20:33.09:0,33,850	0/0:25,0:25:45.45:0,45,1151	0/0:17,0:24:33.11:0,33,1173	0/0:3,0:5:11.99:0,12,219
chr10	100624741	.	C	CT	12046.91	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-14.807;DP=698;FS=2.183;HRun=8;HaplotypeScore=66.3128;InbreedingCoeff=0.9988;MQ=62.29;MQ0=0;MQRankSum=1.340;QD=27.44;ReadPosRankSum=0.355;VQSLOD=5.4909;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:54.16:617,54,0	0/0:12,0:12:33.02:0,33,302	0/0:16,0:17:28.56:0,29,252	0/0:14,0:14:26.81:0,27,229	1/1:2,27:29:81.23:927,81,0	1/1:5,23:27:54.16:623,54,0	1/1:4,16:20:45.09:505,45,0	1/1:7,25:32:72.20:820,72,0	0/0:23,0:23:66.02:0,66,599	0/0:28,0:28:75.04:0,75,686	0/0:29,0:29:78.03:0,78,714	1/1:0,26:26:69.21:796,69,0	0/0:21,0:21:45.01:0,45,412	1/1:3,22:25:57.17:658,57,0	0/0:22,0:22:48:0,48,435	1/1:2,18:20:51.15:589,51,0	0/0:37,0:38:82.66:0,83,861	0/0:19,0:19:48.02:0,48,439	1/1:3,22:25:66.19:752,66,0	1/1:2,32:35:96.20:1088,96,0	1/1:1,13:14:36.11:415,36,0	1/1:3,29:32:78.23:896,78,0	1/1:5,31:36:91.82:1042,92,0	1/1:2,12:14:29.14:375,29,0	0/0:36,0:36:96.04:0,96,878	1/1:5,24:29:50.77:802,51,0	1/1:3,35:39:84.08:949,84,0	1/1:6,8:14:20.04:192,20,0
chr10	100625176	.	GTT	G	3875.35	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=9.318;DP=660;FS=11.425;HRun=13;HaplotypeScore=85.4448;InbreedingCoeff=0.9939;MQ=69.53;MQ0=1;MQRankSum=-0.377;QD=20.08;ReadPosRankSum=4.711;VQSLOD=1.9597;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,29:37:74.68:760,75,0	1/1:3,8:11:17.88:174,18,0	0/0:24,0:19:24.23:0,24,223	0/0:13,0:12:14.07:0,14,160	0/0:34,0:36:79.89:0,80,1039	0/0:15,0:16:41.63:0,42,572	0/0:15,0:15:41.55:0,42,521	0/0:30,0:31:68.70:0,69,928	0/0:23,0:25:60.14:0,60,814	0/0:26,0:28:53.65:0,54,716	0/0:20,0:24:69.17:0,69,890	1/1:5,15:21:44.78:418,45,0	0/0:17,0:19:48.12:0,48,628	1/1:5,15:21:26.78:361,27,0	1/1:4,26:30:75.11:727,75,0	0/0:20,0:21:51.17:0,51,723	0/0:26,0:27:74.68:0,75,991	0/0:13,0:14:41.61:0,42,555	0/0:15,0:15:36.09:0,36,456	0/0:29,0:37:89:0,89,1154	0/0:10,0:10:27.07:0,27,354	1/1:5,21:26:54.02:522,54,0	1/1:7,21:29:50.94:544,51,0	1/1:3,13:17:39.01:368,39,0	0/0:25,0:31:73.69:0,74,935	0/0:40,0:42:99:0,102,1315	0/0:24,0:28:77.22:0,77,1024	0/0:9,0:10:21.07:0,21,288
chr10	100628181	.	CT	C	3948.69	PASS	AB=0.591;AC=21;AF=0.375;AN=56;BaseQRankSum=10.866;DP=481;FS=0.937;HRun=8;HaplotypeScore=55.1594;InbreedingCoeff=0.9317;MQ=64.33;MQ0=2;MQRankSum=0.306;QD=23.09;ReadPosRankSum=-0.030;VQSLOD=4.0682;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.16:0,69,805	0/0:6,0:5:12.04:0,12,145	0/0:24,0:14:35.23:0,35,386	0/0:12,0:10:16.22:0,16,186	1/1:2,12:14:39.06:377,39,0	1/1:2,14:16:36.06:347,36,0	1/1:4,11:15:33.05:319,33,0	1/1:7,21:27:57.06:540,57,0	0/0:11,0:11:30.09:0,30,362	0/0:24,0:24:66.20:0,66,788	0/0:20,0:20:57.17:0,57,684	0/0:26,0:26:34.25:0,34,695	0/0:15,0:15:42.09:0,42,491	0/0:22,0:22:57.13:0,57,661	0/0:20,0:20:51.16:0,51,616	1/1:1,18:19:45.07:435,45,0	0/0:19,0:19:51.12:0,51,591	0/0:13,0:13:30.03:0,30,347	1/1:0,12:12:36.05:344,36,0	1/1:2,8:10:30.04:285,30,0	1/1:1,9:10:24.04:232,24,0	0/0:18,0:18:51.16:0,51,616	0/0:18,0:18:51.14:0,51,604	0/0:14,0:14:29.97:0,30,327	0/0:22,0:22:63.18:0,63,750	1/1:1,22:22:63.10:608,63,0	1/1:2,9:11:24.04:232,24,0	0/1:4,9:13:6.15:231,0,6
chr10	100628266	.	C	CA	3817.04	PASS	AC=22;AF=0.423;AN=52;BaseQRankSum=0.217;DP=369;FS=21.420;HRun=2;HaplotypeScore=40.1152;InbreedingCoeff=0.9509;MQ=47.09;MQ0=24;MQRankSum=-0.552;QD=26.32;ReadPosRankSum=-0.246;VQSLOD=1.7469;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:16:42.13:0,42,520	./.	0/0:2,0:2:2.50:0,2,9	./.	1/1:0,19:19:48.11:658,48,0	1/1:2,5:4:9.03:129,9,0	1/1:5,9:9:18.06:259,18,0	1/1:13,16:15:42.09:571,42,0	0/0:10,0:8:24.08:0,24,297	0/0:19,0:18:51.14:0,51,611	0/0:12,0:11:30.08:0,30,359	0/0:22,0:20:48.10:0,48,564	0/0:11,0:9:15.05:0,15,186	0/0:21,0:20:45.14:0,45,553	0/0:14,0:13:30.09:0,30,372	1/1:1,14:13:39.13:560,39,0	0/0:13,0:12:29.84:0,30,354	0/0:9,0:9:18.06:0,18,223	1/1:2,7:8:21.05:282,21,0	1/1:1,7:8:24.08:339,24,0	1/1:9,7:10:21.07:302,21,0	0/0:19,0:16:39.12:0,39,483	0/0:13,0:11:33.10:0,33,409	0/0:21,0:20:33.10:0,33,409	0/0:13,0:12:33.08:0,33,394	1/1:4,9:9:27.08:372,27,0	1/1:2,7:5:12.04:172,12,0	1/1:2,4:6:14.98:171,15,0
chr10	100628917	.	C	CTT	12758.20	PASS	AC=36;AF=0.667;AN=54;BaseQRankSum=9.015;DP=669;FS=5.784;HRun=7;HaplotypeScore=102.4130;InbreedingCoeff=0.9990;MQ=76.53;MQ0=1;MQRankSum=-1.114;QD=27.32;ReadPosRankSum=2.681;VQSLOD=4.3685;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:35:79.17:277,79,0	1/1:2,0:10:19.96:70,20,0	0/0:20,0:20:48.13:0,48,559	0/0:16,0:16:30.07:0,30,337	1/1:4,19:24:60.20:981,60,0	1/1:6,24:30:69.24:1133,69,0	1/1:1,25:27:78.26:1260,78,0	1/1:5,27:34:84.20:1286,84,0	0/0:24,0:24:60.12:0,60,685	0/0:33,0:33:78.21:0,78,909	0/0:23,0:23:54.15:0,54,628	1/1:5,0:25:42.40:149,42,0	0/0:25,0:25:69.20:0,69,804	1/1:2,0:32:67.37:237,67,0	1/1:2,0:22:37.43:132,37,0	1/1:0,25:24:72.25:1182,72,0	0/0:23,0:23:63.19:0,63,734	0/0:20,0:20:51.10:0,51,580	1/1:5,22:28:72.24:1155,72,0	1/1:3,22:25:59.94:961,60,0	1/1:2,21:23:63.22:1034,63,0	1/1:2,0:21:42.42:149,42,0	1/1:5,0:19:34.93:123,35,0	1/1:3,0:27:57.39:202,57,0	0/0:18,0:18:39.11:0,39,453	1/1:5,22:27:37.28:1095,37,0	1/1:2,29:32:80.90:1329,81,0	./.
chr10	100629643	.	TA	T	5944.67	PASS	AB=0.796;AC=22;AF=0.393;AN=56;BaseQRankSum=11.630;DP=654;FS=1.911;HRun=8;HaplotypeScore=51.9674;InbreedingCoeff=0.8511;MQ=52.10;MQ0=27;MQRankSum=0.265;QD=20.43;ReadPosRankSum=1.485;VQSLOD=4.6735;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:24:46.41:0,46,721	0/0:15,0:14:36.11:0,36,435	0/1:3,0:3:0.39:0,0,64	0/0:2,0:2:6.02:0,6,73	1/1:6,32:34:93.15:898,93,0	1/1:6,12:15:27.04:261,27,0	1/1:4,7:7:18.03:174,18,0	1/1:12,31:34:73.15:866,73,0	0/0:16,0:12:33.09:0,33,385	0/0:34,0:27:69.20:0,69,816	0/0:36,0:28:72.22:0,72,866	0/0:18,1:11:1.09:0,1,281	0/0:22,0:21:60.18:0,60,723	0/0:24,0:19:51.11:0,51,598	0/0:26,0:20:48.15:0,48,578	1/1:7,20:23:60.09:579,60,0	0/0:40,0:29:81.20:0,81,950	0/0:24,0:19:48.03:0,48,522	1/1:5,20:21:57.08:546,57,0	1/1:3,27:27:78.13:753,78,0	1/1:6,12:12:33.05:318,33,0	0/0:9,0:8:18.05:0,18,214	0/0:19,0:15:42.12:0,42,496	0/0:15,0:11:30.09:0,30,362	0/0:34,0:25:66.20:0,66,797	0/1:9,20:24:6.15:506,0,6	1/1:6,23:25:57.09:551,57,0	1/1:3,17:17:51.08:492,51,0
chr10	100630212	.	TACACACACACAC	T	267.22	PASS	AB=1.000;AC=9;AF=0.180;AN=50;BaseQRankSum=3.783;DP=508;FS=0.000;HRun=0;HaplotypeScore=171.0067;InbreedingCoeff=0.5193;MQ=65.82;MQ0=12;MQRankSum=-1.788;QD=3.38;ReadPosRankSum=-2.131;VQSLOD=1.8732;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,1:23:5.85:120,6,0	./.	0/0:33,0:18:3.01:0,3,42	0/0:23,0:16:2.94:0,3,18	0/0:20,0:21:8.04:0,8,407	0/0:18,0:18:29.12:0,29,1167	0/0:22,0:22:13.03:0,13,434	0/0:28,0:28:28.33:0,28,807	0/0:12,0:12:15.52:0,16,580	0/0:14,0:14:29.13:0,29,1154	0/0:14,0:14:30.10:0,30,1263	1/1:10,0:12:3:25,3,0	0/0:11,0:11:12.04:0,12,347	1/1:7,1:10:3.01:92,3,0	./.	0/0:13,0:21:9.48:0,9,218	0/0:22,0:31:23.83:0,24,599	0/0:16,0:16:24.08:0,24,933	0/0:15,0:15:15.05:0,15,676	0/0:19,0:18:15.15:0,15,745	0/0:23,0:22:9.01:0,9,252	1/1:9,1:14:3.01:75,3,0	./.	0/1:18,0:18:80.91:81,0,106	0/0:14,0:14:12.04:0,12,478	0/0:20,0:20:36.59:0,37,1489	0/0:21,0:23:17.68:0,18,749	0/0:9,0:7:9.03:0,9,390
chr10	100630222	.	C	CACACAC	1224.87	PASS	AB=1.000;AC=20;AF=0.476;AN=42;BaseQRankSum=-1.698;DP=532;FS=0.000;HRun=0;HaplotypeScore=142.5118;InbreedingCoeff=0.4298;MQ=54.14;MQ0=14;MQRankSum=-0.271;QD=5.04;ReadPosRankSum=0.105;VQSLOD=2.5449;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:3.01:0,3,30	./.	./.	./.	0/1:19,0:19:23.04:133,0,23	1/1:24,0:23:12.98:209,13,0	0/0:20,0:20:2.89:0,3,10	1/1:22,0:22:5.59:19,6,0	0/1:17,0:17:6.11:6,0,130	0/0:21,0:21:4.46:0,4,96	0/0:15,0:15:21.05:0,21,337	./.	0/0:14,0:14:2.73:0,3,59	0/0:14,0:12:3.01:0,3,47	./.	1/1:18,0:18:0.47:1,0,0	0/1:35,0:33:0.10:0,0,0	0/0:17,0:17:12.44:0,12,205	1/1:13,0:13:14.97:220,15,0	1/1:22,0:21:15.49:253,15,0	./.	0/0:18,0:17:0:0,0,0	./.	0/1:18,0:18:0:0,0,0	0/0:17,0:17:9.03:0,9,155	1/1:25,0:25:12.22:440,12,0	1/1:22,0:21:1.70:52,2,0	1/1:8,0:6:3.88:26,4,0
chr10	100630256	.	C	CAGAAAG	5298.16	PASS	AB=0.874;AC=34;AF=0.607;AN=56;BaseQRankSum=3.573;DP=548;FS=3.910;HRun=0;HaplotypeScore=148.3830;InbreedingCoeff=0.5315;MQ=44.64;MQ0=26;MQRankSum=-2.290;QD=13.38;ReadPosRankSum=-3.994;VQSLOD=3.2222;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:2.01:359,0,2	1/1:8,0:8:2.04:6,2,0	0/0:15,0:3:9.02:0,9,103	0/0:20,0:3:3.01:0,3,69	0/1:12,14:29:2.62:191,0,3	1/1:12,8:22:5.70:40,6,0	1/1:16,0:16:12.25:285,12,0	1/1:25,0:24:47.14:417,47,0	0/0:18,0:18:28.09:0,28,556	0/0:20,0:19:50.83:0,51,681	0/0:16,0:16:38.80:0,39,496	1/1:17,0:17:26.28:332,26,0	0/0:16,0:16:35.06:0,35,673	0/1:15,0:12:8.67:67,0,9	0/1:19,0:18:11.09:53,0,11	1/1:16,2:18:18.45:334,18,0	0/0:28,0:25:32.85:0,33,591	0/1:15,0:14:5.26:5,0,341	1/1:9,0:18:20.22:453,20,0	1/1:25,0:24:34.17:353,34,0	1/1:23,1:20:16.94:309,17,0	1/1:20,0:19:23.68:370,24,0	1/1:20,0:20:15.05:249,15,0	1/1:10,0:10:6.02:84,6,0	0/0:19,0:19:12.43:0,12,351	0/1:10,15:27:38.73:822,0,39	1/1:22,0:23:37.15:358,37,0	1/1:12,0:8:15.41:210,15,0
chr10	100630719	.	TCCAA	T	11844.30	PASS	AB=0.531;AC=21;AF=0.375;AN=56;BaseQRankSum=16.336;DP=660;FS=2.115;HRun=0;HaplotypeScore=147.8639;InbreedingCoeff=0.9246;MQ=83.75;MQ0=0;MQRankSum=-8.951;QD=45.73;ReadPosRankSum=2.250;VQSLOD=5.4454;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,3358	0/0:10,0:10:30.08:0,30,805	0/0:25,0:25:72.23:0,72,1852	0/0:24,0:24:63.50:0,63,1698	1/1:0,31:31:93.32:1680,93,0	1/1:2,22:24:60.21:1091,60,0	1/1:3,16:19:48.16:865,48,0	1/1:3,26:29:78.25:1372,78,0	0/0:28,0:28:84.27:0,84,2371	0/0:22,0:22:66.22:0,66,1854	0/0:18,0:18:54.19:0,54,1560	0/0:20,0:20:60.20:0,60,1653	0/0:21,0:21:63.21:0,63,1764	0/0:25,0:25:75.26:0,75,2122	0/0:22,0:22:66.21:0,66,1850	0/1:3,23:26:17.67:1131,0,18	0/0:37,0:37:99:0,111,3030	0/0:16,0:16:48.16:0,48,1349	1/1:6,9:15:27.06:479,27,0	1/1:1,20:21:54.18:977,54,0	1/1:4,26:30:60.19:1086,60,0	0/0:23,0:23:65.92:0,66,1772	0/0:16,0:16:48.16:0,48,1324	0/0:26,0:26:75.20:0,75,2048	0/0:27,0:27:81.23:0,81,2148	1/1:4,26:30:78.23:1418,78,0	1/1:1,24:25:72.25:1309,72,0	1/1:1,8:9:24.08:436,24,0
chr10	100631352	.	CT	C	6120.03	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-0.062;DP=622;FS=15.079;HRun=10;HaplotypeScore=113.1269;InbreedingCoeff=0.9992;MQ=65.46;MQ0=4;MQRankSum=-6.953;QD=21.10;ReadPosRankSum=-1.630;VQSLOD=3.5873;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,117,1271	1/1:4,10:14:32.99:286,33,0	0/0:24,1:17:32.87:0,33,302	0/0:24,0:16:38.66:0,39,378	1/1:6,22:28:68.94:595,69,0	1/1:3,15:18:50.89:432,51,0	1/1:3,19:23:59.02:501,59,0	1/1:16,27:42:99:856,101,0	0/0:17,0:18:39.08:0,39,415	0/0:23,0:23:56.82:0,57,602	0/0:24,0:24:60.14:0,60,652	0/0:20,0:20:57.11:0,57,617	0/0:19,0:19:42.11:0,42,461	0/0:20,0:20:35.95:0,36,398	1/1:3,19:22:59.97:517,60,0	1/1:0,14:14:41.99:365,42,0	0/0:14,0:14:30.06:0,30,322	0/0:16,0:16:36.08:0,36,388	1/1:6,23:29:77.17:650,77,0	1/1:3,14:17:41.97:365,42,0	1/1:3,10:12:23.97:208,24,0	0/0:18,1:19:28.10:0,28,537	0/0:22,0:22:58:0,58,618	0/0:16,0:16:42.11:0,42,464	0/0:20,1:21:37.10:0,37,623	1/1:7,27:33:47.78:644,48,0	1/1:7,19:26:53.97:469,54,0	1/1:0,9:9:26.99:234,27,0
chr10	100631401	.	A	AG	20508.65	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-1.732;DP=567;FS=3.997;HRun=2;HaplotypeScore=102.6925;InbreedingCoeff=0.7236;MQ=52.46;MQ0=3;MQRankSum=-1.732;QD=36.49;ReadPosRankSum=1.186;VQSLOD=4.9763;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,54:55:99:1900,132,0	1/1:1,10:11:33.11:473,33,0	0/0:5,0:1:2.88:0,3,15	0/1:5,0:1:0:0,0,0	1/1:1,30:31:84.21:1143,84,0	1/1:1,20:21:60.20:853,60,0	1/1:1,21:21:51.17:719,51,0	1/1:6,26:32:81.26:1128,81,0	1/1:1,23:24:60.20:863,60,0	1/1:0,21:21:63.20:886,63,0	1/1:1,24:26:69.23:980,69,0	1/1:0,18:18:45.15:648,45,0	1/1:0,20:20:57.19:820,57,0	1/1:0,17:17:42.14:605,42,0	1/1:2,13:15:42.13:588,42,0	1/1:1,14:15:42.14:603,42,0	1/1:1,22:23:66.22:950,66,0	1/1:1,14:15:39.13:561,39,0	1/1:5,11:15:33.11:462,33,0	1/1:2,27:29:75.25:1059,75,0	1/1:3,21:23:51.17:726,51,0	1/1:4,14:18:36.12:518,36,0	1/1:1,22:23:54.18:776,54,0	1/1:0,13:13:33.11:475,33,0	1/1:0,23:23:69.23:992,69,0	1/1:1,21:21:63.18:883,63,0	1/1:1,17:18:48.16:689,48,0	1/1:1,4:5:15.05:210,15,0
chr10	100631761	.	T	TA	902.32	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.613;DP=647;FS=3.687;HRun=6;HaplotypeScore=67.8688;InbreedingCoeff=0.9818;MQ=83.69;MQ0=0;MQRankSum=-2.161;QD=27.34;ReadPosRankSum=0.899;VQSLOD=4.3129;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,138,1386	1/1:1,4:5:12.04:151,12,0	0/0:21,0:21:42.02:0,42,402	0/0:22,0:23:41.74:0,42,414	0/0:42,0:42:99:0,99,987	0/0:29,0:29:84.19:0,84,857	0/0:17,0:17:45.09:0,45,452	0/0:22,0:22:60.12:0,60,601	0/0:19,0:19:57.11:0,57,574	0/0:32,0:32:90.20:0,90,918	0/0:24,0:24:72.16:0,72,734	0/0:18,0:18:45.10:0,45,458	0/0:22,0:22:66.13:0,66,666	0/0:19,0:19:51.10:0,51,514	1/1:4,24:28:69.22:868,69,0	0/0:23,0:23:60.13:0,60,612	0/0:22,0:22:63.11:0,63,628	0/0:16,0:16:42.10:0,42,428	0/0:25,0:25:75.09:0,75,747	0/0:26,0:26:63.14:0,63,641	0/0:28,0:28:78.17:0,78,796	0/0:22,0:22:60.13:0,60,612	0/0:19,0:19:51.11:0,51,516	0/0:23,0:23:69.14:0,69,692	0/0:17,0:17:48.11:0,48,490	0/0:19,0:19:51.11:0,51,520	0/0:30,0:30:90.18:0,90,906	0/0:7,0:7:21.05:0,21,214
chr10	100631883	.	T	TG	7111.38	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=5.088;DP=586;FS=2.338;HRun=7;HaplotypeScore=84.6128;InbreedingCoeff=0.9998;MQ=79.80;MQ0=0;MQRankSum=-1.151;QD=30.39;ReadPosRankSum=-1.411;VQSLOD=4.4125;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.07:0,63,596	0/0:12,0:12:33.05:0,33,318	0/0:17,0:18:50.70:0,51,446	0/0:24,0:24:56.91:0,57,499	1/1:3,27:30:69.21:831,69,0	1/1:3,15:18:42.13:507,42,0	1/1:1,18:19:51.16:612,51,0	1/1:3,28:31:81.21:949,81,0	0/0:19,0:19:54.09:0,54,521	0/0:22,0:22:60.09:0,60,575	0/0:20,0:20:54.07:0,54,515	0/0:22,0:22:57.07:0,57,545	0/0:20,0:20:60.04:0,60,564	0/0:15,0:15:42.07:0,42,406	0/0:30,0:30:68.97:0,69,650	1/1:1,14:15:33.10:396,33,0	0/0:21,0:21:51.06:0,51,486	0/0:23,0:23:57.09:0,57,550	1/1:0,16:16:48.15:579,48,0	1/1:1,22:23:66.16:781,66,0	1/1:3,22:25:60.18:725,60,0	0/0:22,0:22:59.98:0,60,562	0/0:18,0:18:45.07:0,45,435	0/0:21,0:21:45.06:0,45,434	0/0:21,0:21:54.08:0,54,521	1/1:3,24:27:72.22:868,72,0	1/1:4,16:20:42.13:502,42,0	1/1:0,10:10:30.09:362,30,0
chr10	100631993	.	AAATCAATC	A	2627.09	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=15.509;DP=706;FS=4.566;HRun=0;HaplotypeScore=225.7154;InbreedingCoeff=0.0873;MQ=72.27;MQ0=4;MQRankSum=-15.110;QD=10.30;ReadPosRankSum=1.383;VQSLOD=2.5565;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:69.24:0,69,2375	1/1:0,8:8:21.07:488,21,0	0/0:37,0:27:57.18:0,57,1255	0/0:35,0:27:69.17:0,69,1605	0/1:40,0:40:94.21:94,0,839	0/1:22,0:22:99:205,0,144	0/1:23,0:23:99:149,0,231	0/0:30,0:30:23.94:0,24,1047	0/0:31,0:31:81.26:0,81,2726	0/0:24,0:24:63.22:0,63,2246	0/0:39,0:39:99:0,117,4214	0/0:22,0:23:57.18:0,57,1804	0/0:26,0:26:78.26:0,78,2550	0/0:20,0:20:42.14:0,42,1233	1/1:3,29:32:33.11:907,33,0	0/1:23,0:23:99:164,0,161	0/0:25,0:25:69.21:0,69,2433	0/0:20,0:20:48.16:0,48,1806	0/1:13,0:12:36.65:37,0,213	0/1:30,0:30:99:214,0,400	0/0:12,0:12:6.34:0,6,306	0/0:19,0:19:48.15:0,48,1457	0/0:24,0:24:57.18:0,57,1464	0/0:37,0:37:99:0,101,3202	0/0:17,0:17:45.15:0,45,1294	0/1:23,0:23:99:182,0,275	0/1:30,0:30:99:295,0,344	0/1:11,0:11:58.07:58,0,71
chr10	100632004	.	TCAAACAAACAAA	T	11772.74	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=5.471;DP=696;FS=0.000;HRun=0;HaplotypeScore=245.6646;InbreedingCoeff=0.9762;MQ=64.52;MQ0=6;MQRankSum=-8.618;QD=47.28;ReadPosRankSum=-1.774;VQSLOD=3.7224;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:34:72.25:0,72,3384	0/0:8,0:8:14.97:0,15,123	0/0:30,0:20:19.74:0,20,922	0/0:36,0:26:32.29:0,32,1510	1/1:16,21:37:44.95:1146,45,0	1/1:4,16:20:36.12:1268,36,0	1/1:6,16:22:30.10:1023,30,0	1/1:20,17:37:51.10:928,51,0	0/0:26,0:26:57.20:0,57,3135	0/0:24,0:24:63.20:0,63,3004	0/0:42,0:42:99:0,114,5900	0/0:6,0:24:46.69:0,47,2189	0/0:27,0:27:66.20:0,66,3284	0/0:7,0:20:30.09:0,30,1380	0/0:33,0:33:44.91:0,45,597	1/1:4,17:21:30.10:1057,30,0	0/0:24,0:25:60.21:0,60,3290	0/0:20,0:20:51.18:0,51,2625	1/1:6,7:11:21.01:587,21,0	1/1:7,20:27:51.12:1617,51,0	1/1:7,4:11:5.93:176,6,0	0/0:6,0:19:48.16:0,48,2125	0/0:11,0:25:34.06:0,34,1526	0/0:14,0:35:87.29:0,87,4246	0/0:18,0:18:27.56:0,28,1522	1/1:3,17:20:51.13:1516,51,0	1/1:9,20:29:60.18:2031,60,0	1/1:2,10:12:12.04:423,12,0
chr10	100632410	.	AG	A	1031.19	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.891;DP=613;FS=7.342;HRun=1;HaplotypeScore=57.8117;InbreedingCoeff=0.9934;MQ=82.17;MQ0=0;MQRankSum=-1.497;QD=30.33;ReadPosRankSum=0.462;VQSLOD=2.7310;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.13:0,69,983	1/1:0,7:7:21.07:293,21,0	0/0:17,0:17:44.32:0,44,670	0/0:18,0:18:50.02:0,50,591	0/0:32,0:32:96.27:0,96,1400	0/0:28,0:28:84.26:0,84,1242	0/0:24,0:24:72.22:0,72,1060	0/0:35,0:35:99:0,102,1499	0/0:19,0:19:57.18:0,57,850	0/0:23,0:23:69.22:0,69,1016	0/0:26,0:26:78.25:0,78,1171	0/0:14,0:14:42.14:0,42,643	0/0:21,0:21:63.21:0,63,962	0/0:26,0:26:78.25:0,78,1171	1/1:0,27:27:63.17:858,63,0	0/0:23,0:23:69.22:0,69,1035	0/0:20,0:20:60.17:0,60,872	0/0:16,0:16:48.13:0,48,707	0/0:15,0:15:45.15:0,45,689	0/0:31,0:31:93.20:0,93,1347	0/0:22,0:22:66.21:0,66,984	0/0:19,0:19:57.15:0,57,805	0/0:25,0:25:75.25:0,75,1146	0/0:10,0:10:30.10:0,30,454	0/0:23,0:23:69.19:0,69,1009	0/0:20,0:20:60.20:0,60,901	0/0:43,0:42:99:0,129,1892	0/0:6,0:6:18.02:0,18,230
chr10	100632916	.	AGTGTGTGT	A	4107.40	PASS	AB=0.763;AC=26;AF=0.500;AN=52;BaseQRankSum=4.748;DP=428;FS=0.000;HRun=0;HaplotypeScore=106.7608;InbreedingCoeff=0.4608;MQ=54.57;MQ0=8;MQRankSum=-7.804;QD=17.04;ReadPosRankSum=0.315;VQSLOD=2.0347;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:17:8.26:8,0,89	0/0:5,0:9:18.03:0,18,307	./.	./.	1/1:5,6:11:12.04:304,12,0	1/1:12,10:23:15.05:360,15,0	1/1:5,10:15:12.04:267,12,0	0/1:26,0:25:83.63:132,0,84	0/0:9,0:9:12.04:0,12,414	0/0:10,0:10:12.04:0,12,429	0/0:10,0:10:18.06:0,18,685	0/1:7,0:13:13.89:36,0,14	0/0:23,0:22:33.11:0,33,1080	0/1:4,0:12:48.44:59,0,48	0/0:13,0:20:15.05:0,15,324	1/1:2,6:8:18.06:457,18,0	0/0:21,0:22:45.14:0,45,1461	0/0:17,0:17:27.09:0,27,927	1/1:14,4:18:9.02:204,9,0	1/1:5,14:19:24.08:609,24,0	1/1:10,5:14:3.01:67,3,0	0/1:3,0:9:30.98:31,0,58	0/1:10,1:15:13.48:98,0,13	0/0:10,0:14:2.45:0,2,43	0/0:12,0:12:33.11:0,33,1158	1/1:2,9:11:24.08:562,24,0	1/1:7,8:15:24.08:609,24,0	1/1:8,6:14:12.04:304,12,0
chr10	100633041	.	CATT	C	2345.72	PASS	AB=0.743;AC=35;AF=0.761;AN=46;BaseQRankSum=5.152;DP=278;FS=0.971;HRun=0;HaplotypeScore=44.3637;InbreedingCoeff=0.4252;MQ=72.86;MQ0=1;MQRankSum=-0.180;QD=11.12;ReadPosRankSum=0.580;VQSLOD=2.5260;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,9:16:29.92:255,0,30	1/1:0,0:1:2.98:21,3,0	./.	./.	1/1:6,4:10:12.04:159,12,0	0/1:3,7:10:36.77:212,0,37	1/1:8,2:10:3.01:40,3,0	1/1:30,0:29:3.01:40,3,0	1/1:4,4:8:6.02:80,6,0	0/0:7,0:7:6.02:0,6,116	0/0:8,0:8:15.05:0,15,280	1/1:3,1:4:3.01:40,3,0	0/0:8,0:8:12.04:0,12,231	1/1:3,4:7:12.04:159,12,0	1/1:7,0:14:8.93:63,9,0	1/1:8,0:8:6.02:79,6,0	1/1:8,17:27:51.10:639,51,0	1/1:7,0:7:2.99:23,3,0	1/1:10,5:15:15.05:199,15,0	1/1:6,3:9:9.03:119,9,0	./.	./.	0/1:7,0:7:0:0,0,0	./.	0/0:13,0:13:18.06:0,18,338	1/1:8,6:14:18.01:205,18,0	1/1:5,3:8:6.02:80,6,0	1/1:4,2:6:6.02:80,6,0
chr10	100633680	.	AATATATATATATATATATATATAT	A	3494.80	PASS	AC=22;AF=0.786;AN=28;BaseQRankSum=4.292;DP=197;FS=10.636;HRun=0;HaplotypeScore=124.3669;InbreedingCoeff=0.5358;MQ=80.85;MQ0=5;MQRankSum=-2.496;QD=33.93;ReadPosRankSum=0.541;VQSLOD=2.0805;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:8,1:11:3.01:168,3,0	1/1:2,6:8:9.03:565,9,0	1/1:6,0:6:0.89:2,1,0	1/1:16,0:23:5.73:154,6,0	./.	./.	./.	0/0:2,0:2:3.01:0,3,79	./.	./.	./.	1/1:3,0:3:2.99:24,3,0	0/0:9,0:8:15.03:0,15,1263	0/0:6,0:6:9.03:0,9,641	1/1:10,1:12:15.17:452,15,0	1/1:2,1:3:2.97:20,3,0	1/1:6,0:6:3.01:38,3,0	./.	./.	./.	./.	1/1:3,7:12:24.53:1029,25,0	1/1:4,1:10:12.04:664,12,0	1/1:7,2:8:6.96:379,7,0
chr10	100633750	.	G	GGTCT	527.24	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=1.171;DP=271;FS=2.635;HRun=0;HaplotypeScore=90.0603;InbreedingCoeff=0.6479;MQ=72.97;MQ0=1;MQRankSum=-3.368;QD=31.01;ReadPosRankSum=-1.541;VQSLOD=3.4326;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:24.08:0,24,435	1/1:0,3:3:9.03:239,9,0	0/0:12,0:11:0.70:0,1,306	0/0:9,0:4:12:0,12,147	0/0:20,0:20:32.97:0,33,615	0/0:12,0:12:36.08:0,36,634	0/0:8,0:8:18.06:0,18,336	0/0:32,0:32:93.32:0,93,1717	./.	0/0:8,0:8:24.08:0,24,419	0/0:6,0:6:5.75:0,6,108	0/0:4,0:4:12.04:0,12,224	0/0:5,0:5:15.05:0,15,280	0/0:7,0:7:12:0,12,181	1/1:2,11:14:18.06:398,18,0	0/0:3,0:3:9.03:0,9,167	0/0:9,0:9:27.09:0,27,488	0/0:7,0:7:13.92:0,14,329	0/0:18,0:17:51.13:0,51,888	0/0:10,0:10:27.01:0,27,429	0/0:5,0:5:9.03:0,9,168	0/0:2,0:2:6.02:0,6,106	0/0:3,0:3:9.03:0,9,168	./.	0/0:5,0:5:9.03:0,9,154	0/0:24,0:24:69.24:0,69,1279	0/0:24,0:24:66.23:0,66,1196	0/0:11,0:11:21.07:0,21,388
chr10	100634008	.	T	TC	716.68	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.915;DP=443;FS=23.941;HRun=1;HaplotypeScore=52.5335;InbreedingCoeff=0.9735;MQ=69.35;MQ0=0;MQRankSum=-2.600;QD=32.58;ReadPosRankSum=-0.645;VQSLOD=1.7129;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.08:0,63,732	1/1:0,5:5:15.05:221,15,0	0/0:12,0:12:31.71:0,32,382	0/0:12,0:13:29.77:0,30,403	0/0:21,0:21:63.12:0,63,781	0/0:25,0:25:72.13:0,72,871	0/0:11,0:11:33.05:0,33,393	0/0:34,0:34:96.31:0,96,1233	0/0:11,0:11:33.11:0,33,423	0/0:20,0:20:60.15:0,60,738	0/0:6,0:6:15.05:0,15,195	0/0:17,0:17:51.08:0,51,618	0/0:14,0:14:39.06:0,39,468	0/0:20,0:20:57.08:0,57,682	1/1:0,17:17:42.14:614,42,0	0/0:22,0:22:63.19:0,63,792	0/0:14,0:14:39.01:0,39,464	0/0:13,0:13:39.13:0,39,503	0/0:31,0:31:84.26:0,84,1063	0/0:13,0:13:36.06:0,36,447	0/0:12,0:12:33.11:0,33,427	0/0:8,0:8:18.05:0,18,222	0/0:19,0:19:51.14:0,51,635	0/0:8,0:8:24.04:0,24,291	0/0:7,0:7:21.07:0,21,272	0/0:19,0:19:51.09:0,51,613	0/0:21,0:21:51.17:0,51,657	0/0:7,0:7:21.03:0,21,253
chr10	100634024	.	TC	T	271.13	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.703;DP=433;FS=26.564;HRun=6;HaplotypeScore=59.9302;InbreedingCoeff=0.9529;MQ=68.20;MQ0=0;MQRankSum=-4.324;QD=20.86;ReadPosRankSum=0.164;VQSLOD=1.8527;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:45.14:0,45,583	1/1:1,3:4:9.02:96,9,0	0/0:19,0:19:33.13:0,33,537	0/0:20,0:20:42.86:0,43,509	0/0:19,0:19:54.18:0,54,706	0/0:22,0:22:63.20:0,63,826	0/0:12,0:12:33.11:0,33,427	0/0:37,0:37:96.17:0,96,1164	0/0:10,0:10:27.09:0,27,355	0/0:16,0:16:45.14:0,45,581	0/0:7,0:7:18.06:0,18,234	0/0:16,0:16:45.15:0,45,591	0/0:15,0:15:42.14:0,42,550	0/0:22,0:22:66.10:0,66,807	1/1:0,9:9:27.07:289,27,0	0/0:19,0:19:57.17:0,57,731	0/0:16,0:16:48.08:0,48,594	0/0:12,0:12:30.08:0,30,374	0/0:22,0:22:57.19:0,57,750	0/0:14,0:14:38.48:0,38,467	0/0:12,0:12:36.12:0,36,473	0/0:7,0:7:21.07:0,21,276	0/0:17,0:17:36.12:0,36,469	0/0:12,0:12:36.11:0,36,456	0/0:5,0:5:15.04:0,15,185	0/0:17,0:17:45.15:0,45,590	0/0:20,0:20:60.16:0,60,768	0/0:10,0:10:30.04:0,30,346
chr10	100634356	.	T	TC	1117.60	PASS	AB=0.978;AC=38;AF=0.679;AN=56;BaseQRankSum=-0.085;DP=318;FS=4.634;HRun=3;HaplotypeScore=128.2067;InbreedingCoeff=-0.0634;MQ=53.17;MQ0=2;MQRankSum=-5.290;QD=3.64;ReadPosRankSum=7.727;VQSLOD=0.1691;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:14:4.68:45,5,0	1/1:1,9:10:26.98:326,27,0	0/1:16,0:10:9.48:9,0,75	0/1:17,0:11:12.81:13,0,124	0/1:17,0:17:9.63:10,0,27	0/1:8,0:8:4.33:19,0,4	0/1:12,0:11:9.23:9,0,45	0/1:11,0:10:0.94:1,0,19	0/1:5,0:5:4.08:12,0,4	1/1:23,0:23:36.12:108,36,0	0/1:18,0:18:22.28:22,0,53	1/1:7,0:7:14.32:46,14,0	0/1:16,0:16:2.71:64,0,3	0/1:13,0:13:31.34:35,0,31	0/1:5,4:9:1.97:178,0,2	0/1:14,0:13:21.05:21,0,49	1/1:8,0:8:10.45:28,10,0	0/1:2,0:2:0.03:0,0,0	1/1:5,0:5:6.58:18,7,0	1/1:12,0:12:10.74:49,11,0	0/0:2,0:2:2.80:0,3,13	1/1:4,0:4:4.83:14,5,0	1/1:16,0:16:3.25:51,3,0	0/0:9,0:9:6.26:0,6,50	1/1:16,0:16:26.06:88,26,0	0/1:10,0:10:19.89:20,0,25	1/1:16,0:16:5.19:53,5,0	1/1:7,0:7:10.03:27,10,0
chr10	100634357	.	T	TC	9662.98	PASS	AB=0.727;AC=52;AF=0.929;AN=56;BaseQRankSum=-5.243;DP=326;FS=0.000;HRun=1;HaplotypeScore=106.0649;InbreedingCoeff=0.0819;MQ=52.98;MQ0=2;MQRankSum=-1.906;QD=29.64;ReadPosRankSum=1.368;VQSLOD=4.5977;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:5,11:15:1.52:389,0,2	1/1:10,0:10:26.98:325,27,0	0/1:12,4:10:54.42:134,0,54	0/1:14,3:11:54.55:122,0,55	1/1:3,14:17:29.86:355,30,0	1/1:2,7:9:23.93:298,24,0	1/1:6,7:12:18.76:295,19,0	1/1:8,4:11:18.03:211,18,0	1/1:3,3:6:9.19:155,9,0	1/1:1,21:22:66.22:967,66,0	1/1:5,12:17:44.85:501,45,0	1/1:2,6:8:24.03:325,24,0	1/1:3,12:15:38.27:573,38,0	1/1:6,8:14:29.58:420,30,0	1/1:9,0:9:5.86:189,6,0	1/1:3,10:12:30.09:410,30,0	1/1:3,6:9:14.52:257,15,0	1/1:0,2:2:6.02:90,6,0	1/1:0,5:5:12.04:178,12,0	1/1:2,10:12:36.12:517,36,0	0/1:1,1:2:0:0,0,0	1/1:1,4:5:12.04:165,12,0	1/1:2,14:16:42.05:583,42,0	1/1:5,5:10:18.19:129,18,0	1/1:2,14:16:48.15:698,48,0	1/1:2,8:10:29.84:413,30,0	1/1:3,15:18:51.06:696,51,0	1/1:1,6:7:18.06:269,18,0
chr10	100634367	.	T	TC	11123.44	PASS	AB=0.873;AC=54;AF=0.964;AN=56;BaseQRankSum=-7.629;DP=353;FS=12.824;HRun=3;HaplotypeScore=120.1273;InbreedingCoeff=-0.0554;MQ=56.22;MQ0=2;MQRankSum=-1.697;QD=31.51;ReadPosRankSum=4.693;VQSLOD=3.2095;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,11:14:22.65:361,23,0	1/1:4,6:10:28.34:295,28,0	0/1:12,3:10:46.73:169,0,47	0/1:19,2:13:99:174,0,116	1/1:1,17:18:17.48:433,17,0	1/1:1,10:11:10.63:342,11,0	1/1:5,10:14:26.83:459,27,0	1/1:4,11:14:36.08:513,36,0	1/1:2,5:7:7.51:213,8,0	1/1:3,22:25:53.27:971,53,0	1/1:2,15:17:29.19:610,29,0	1/1:0,8:8:24.08:358,24,0	1/1:2,13:15:39.58:623,40,0	1/1:0,14:14:38.88:582,39,0	1/1:2,7:9:23.33:270,23,0	1/1:1,12:12:33.11:493,33,0	1/1:1,10:11:17.84:308,18,0	1/1:2,1:3:9.03:131,9,0	1/1:1,10:11:24.08:359,24,0	1/1:2,10:12:16.66:398,17,0	1/1:3,0:3:3.01:44,3,0	1/1:0,3:3:9.03:135,9,0	1/1:1,18:19:29.58:612,30,0	1/1:3,8:11:19.78:304,20,0	1/1:1,15:16:44.82:639,45,0	1/1:2,9:11:20.80:393,21,0	1/1:1,18:19:48.16:717,48,0	1/1:1,5:6:12.24:220,12,0
chr10	100635089	.	G	GAGAAAAT	4308.36	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.285;DP=675;FS=2.919;HRun=0;HaplotypeScore=150.5669;InbreedingCoeff=0.9687;MQ=88.68;MQ0=0;MQRankSum=-10.348;QD=107.71;ReadPosRankSum=1.880;VQSLOD=6.8412;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.16:0,48,1274	1/1:1,6:8:21.07:831,21,0	0/0:28,0:28:75.26:0,75,1881	0/0:22,0:22:57.11:0,57,1380	0/0:37,0:37:99:0,108,2730	0/0:37,0:37:99:0,111,2807	0/0:14,0:14:42.14:0,42,1093	0/0:33,0:33:90.29:0,90,2223	0/0:20,0:20:60.19:0,60,1502	0/0:43,0:43:99:0,123,3181	0/0:20,0:20:57.20:0,57,1449	0/0:16,0:16:48.15:0,48,1236	0/0:23,0:23:66.21:0,66,1665	0/0:23,0:23:66.23:0,66,1721	1/1:6,26:32:96.33:3477,96,0	0/0:26,0:26:78.24:0,78,1992	0/0:27,0:27:78.27:0,78,2026	0/0:16,0:16:45.15:0,45,1106	0/0:21,0:21:60.19:0,60,1546	0/0:32,0:32:96.33:0,96,2553	0/0:27,0:27:78.25:0,78,1929	0/0:14,0:14:42.13:0,42,1062	0/0:27,0:27:78.27:0,78,2033	0/0:23,0:23:69.24:0,69,1752	0/0:30,0:30:84.28:0,84,2145	0/0:28,0:28:84.28:0,84,2115	0/0:28,0:28:81.28:0,81,2135	0/0:4,0:4:9.03:0,9,243
chr10	100635498	.	TA	T	1142.62	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.671;DP=716;FS=1.394;HRun=3;HaplotypeScore=71.5465;InbreedingCoeff=0.9993;MQ=86.67;MQ0=0;MQRankSum=-4.100;QD=31.74;ReadPosRankSum=0.992;VQSLOD=3.7296;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.21:0,63,907	1/1:0,13:13:36.11:446,36,0	0/0:27,0:27:81.25:0,81,1125	0/0:20,0:20:54.18:0,54,773	0/0:43,0:43:99:0,117,1662	0/0:34,0:34:96.32:0,96,1382	0/0:14,0:14:42.13:0,42,587	0/0:46,0:46:99:0,135,1907	0/0:23,0:23:69.22:0,69,975	0/0:39,0:39:99:0,114,1625	0/0:25,0:25:72.22:0,72,1017	0/0:19,0:19:57.18:0,57,805	0/0:30,0:30:87.27:0,87,1216	0/0:27,0:27:81.27:0,81,1166	1/1:0,23:23:66.21:818,66,0	0/0:30,0:30:90.28:0,90,1260	0/0:13,0:13:36.12:0,36,519	0/0:20,0:20:54.18:0,54,778	0/0:20,0:20:51.16:0,51,718	0/0:38,0:38:99:0,108,1520	0/0:22,0:22:63.19:0,63,888	0/0:25,0:25:69.21:0,69,959	0/0:28,0:28:84.28:0,84,1210	0/0:24,0:24:66.22:0,66,951	0/0:31,0:31:93.30:0,93,1323	0/0:21,0:21:60.19:0,60,832	0/0:29,0:29:81.27:0,81,1166	0/0:9,0:9:27.09:0,27,389
chr10	100637535	.	ATATC	A	1448.26	PASS	AB=0.993;AC=21;AF=0.553;AN=38;BaseQRankSum=4.975;DP=614;FS=1.589;HRun=0;HaplotypeScore=183.0470;InbreedingCoeff=0.3412;MQ=63.07;MQ0=15;MQRankSum=0.252;QD=5.30;ReadPosRankSum=-1.684;VQSLOD=2.7080;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:16,0:15:3.27:14,3,0	./.	./.	./.	1/1:19,0:17:1.77:4,2,0	0/0:15,0:15:2.96:0,3,20	./.	0/0:23,0:23:30.71:0,31,909	0/0:42,0:41:51.17:0,51,1138	0/1:25,1:26:2.25:2,0,673	1/1:17,0:16:3.63:10,4,0	1/1:16,15:31:39.13:607,39,0	0/0:13,0:11:3.01:0,3,36	0/1:18,0:13:0:0,0,0	0/1:22,0:20:4.86:5,0,62	1/1:5,7:12:18.06:280,18,0	1/1:6,1:7:3.01:47,3,0	0/0:17,0:15:5.47:0,5,60	0/1:35,0:34:2.70:3,0,34	./.	./.	1/1:19,0:19:2.99:24,3,0	./.	1/1:11,19:29:36.12:561,36,0	0/1:21,0:19:20.50:20,0,107	0/0:19,0:16:1.44:0,1,74	./.
chr10	100637584	.	TATC	T	1330.72	PASS	AB=0.924;AC=14;AF=0.259;AN=54;BaseQRankSum=8.110;DP=710;FS=17.281;HRun=0;HaplotypeScore=258.6108;InbreedingCoeff=0.1276;MQ=36.63;MQ0=12;MQRankSum=-7.745;QD=4.17;ReadPosRankSum=-3.718;VQSLOD=0.6061;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,1:16:1.18:0,1,2	0/1:19,0:13:29.88:103,0,30	0/0:17,0:7:21.07:0,21,419	0/0:6,0:4:9.03:0,9,180	0/0:49,8:55:0.38:0,0,63	0/1:16,4:19:6.21:249,0,6	0/0:14,0:13:0.40:0,0,2	0/1:35,4:30:99:130,0,703	0/0:23,0:23:63.08:0,63,1235	0/0:26,0:26:75.24:0,75,1488	0/0:27,0:27:58.27:0,58,1629	1/1:13,3:14:10.41:193,10,0	0/0:35,0:35:93.30:0,93,1735	0/0:10,2:12:1.79:0,2,4	0/0:25,0:14:1.36:0,1,2	0/1:24,6:26:99:287,0,216	0/0:21,0:20:44.99:0,45,843	0/0:11,0:11:30.09:0,30,609	0/1:20,1:17:95.04:95,0,322	1/1:45,9:45:9.17:143,9,0	./.	0/0:44,5:42:0.48:0,0,1	1/1:40,1:35:3.62:48,4,0	0/0:13,0:10:0:0,0,1	0/0:34,0:33:84.29:0,84,1599	0/1:36,2:34:99:103,0,943	0/1:30,3:22:99:112,0,258	0/1:8,0:6:13.51:14,0,75
chr10	100637604	.	ATCTG	A	828.42	PASS	AB=0.853;AC=15;AF=0.278;AN=54;BaseQRankSum=8.370;DP=800;FS=24.639;HRun=0;HaplotypeScore=282.1380;InbreedingCoeff=0.1133;MQ=35.78;MQ0=14;MQRankSum=-8.687;QD=2.17;ReadPosRankSum=0.164;VQSLOD=1.2384;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,4:17:5.72:29,6,0	1/1:25,1:19:9.98:46,10,0	0/0:21,0:8:23.47:0,23,369	0/0:13,0:8:16.61:0,17,215	0/0:53,6:54:2.84:0,3,46	0/1:20,3:20:27.08:27,0,35	0/1:16,0:14:0.32:0,0,0	0/1:32,0:25:99:128,0,194	0/0:23,0:23:69.13:0,69,1441	0/0:24,0:24:69.15:0,69,1488	0/0:28,0:28:76.98:0,77,1883	0/0:19,2:19:11.26:0,11,51	0/0:32,0:32:90.25:0,90,2105	0/0:10,7:16:0.45:0,0,1	0/0:27,5:19:0.94:0,1,1	0/1:29,5:30:5.72:6,0,37	0/0:23,0:22:48:0,48,878	0/0:19,0:19:35.01:0,35,824	0/1:18,1:14:99:106,0,102	0/1:42,20:48:19.65:20,0,20	./.	0/0:50,10:52:0.39:0,0,1	0/1:38,11:43:0.30:0,0,0	0/1:12,3:12:0:0,0,0	0/0:37,0:36:99:0,102,2118	0/1:28,11:34:99:488,0,220	0/1:27,11:26:42.84:43,0,100	0/1:6,4:7:47.26:74,0,47
chr10	100637620	.	GTCTATCTA	G	792.03	PASS	AB=0.992;AC=20;AF=0.370;AN=54;BaseQRankSum=8.413;DP=901;FS=9.249;HRun=0;HaplotypeScore=311.5753;InbreedingCoeff=0.0845;MQ=35.38;MQ0=16;MQRankSum=-9.928;QD=1.57;ReadPosRankSum=-5.285;VQSLOD=0.2380;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,2:19:5.85:48,6,0	0/1:29,0:18:22.22:86,0,22	0/0:19,0:6:18.01:0,18,222	0/0:15,0:6:5.39:0,5,201	0/0:63,0:58:2.61:0,3,112	0/1:30,0:25:16.14:16,0,23	1/1:16,0:14:0.36:1,0,0	0/1:37,1:30:91.67:254,0,92	0/0:28,0:28:81.25:0,81,2608	0/0:27,0:27:75.24:0,75,2306	0/0:28,0:28:81.26:0,81,2995	1/1:24,1:22:2.24:37,2,0	0/0:29,0:29:78.23:0,78,2881	1/1:22,0:20:0.89:2,1,0	0/0:34,0:20:0.47:0,0,1	0/1:38,0:31:9.37:9,0,60	0/0:20,0:19:43.63:0,44,1483	0/0:25,0:25:63.15:0,63,1990	0/1:17,1:14:41.47:174,0,41	0/1:75,0:59:3.96:61,0,4	./.	1/1:73,1:63:0.78:3,1,0	0/0:54,3:50:1.41:0,1,3	0/1:17,0:14:0:0,0,0	0/0:44,0:43:99:0,117,4133	0/1:50,0:43:99:173,0,672	0/1:42,0:30:6.07:6,0,261	0/1:8,0:5:5.53:59,0,6
chr10	100637623	.	T	TATC	167.31	PASS	AB=0.963;AC=6;AF=0.111;AN=54;BaseQRankSum=5.384;DP=907;FS=3.490;HRun=0;HaplotypeScore=281.2357;InbreedingCoeff=0.1229;MQ=36.25;MQ0=15;MQRankSum=-4.728;QD=0.77;ReadPosRankSum=-3.520;VQSLOD=2.0615;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:0.80:0,1,29	0/1:27,1:17:54.50:58,0,54	0/0:22,0:7:16.29:0,16,215	0/0:17,0:6:14.41:0,14,197	0/0:61,4:60:1.07:0,1,46	0/0:29,1:25:6.60:0,7,92	0/0:17,0:15:0.76:0,1,3	0/0:34,0:26:5.91:0,6,900	0/0:27,0:27:81.28:0,81,1339	0/0:25,0:25:75.26:0,75,1236	0/0:28,0:28:84.27:0,84,1369	0/0:23,1:20:4.31:0,4,22	0/0:28,0:28:72.25:0,72,1195	0/0:21,1:20:1.14:0,1,2	0/0:33,1:20:1.32:0,1,3	0/1:35,2:30:71.46:71,0,109	0/0:21,0:20:47.95:0,48,749	0/0:24,0:24:63.17:0,63,1014	0/0:18,0:14:1.87:0,2,358	0/0:73,1:59:12.21:0,12,108	./.	0/0:72,6:67:1.51:0,2,3	1/1:59,2:54:1.69:4,2,0	0/0:18,0:14:0:0,0,0	0/0:45,0:44:99:0,120,1941	0/1:48,2:43:99:130,0,1266	0/1:41,1:30:6.95:7,0,335	0/0:9,0:6:14.94:0,15,178
chr10	100637635	.	TATC	T	1775.56	PASS	AB=0.801;AC=19;AF=0.352;AN=54;BaseQRankSum=10.764;DP=915;FS=9.103;HRun=0;HaplotypeScore=264.7063;InbreedingCoeff=0.1670;MQ=36.29;MQ0=16;MQRankSum=-11.139;QD=4.09;ReadPosRankSum=-0.829;VQSLOD=1.0789;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,1:17:4.73:53,5,0	0/1:24,3:17:10.61:69,0,11	0/0:26,0:4:10.28:0,10,169	0/0:19,0:5:6.42:0,6,159	0/0:58,7:58:0.27:0,0,43	1/1:22,7:23:6.45:42,6,0	1/1:15,0:14:0.33:1,0,0	0/1:21,6:18:98.39:407,0,98	0/0:27,0:27:72.22:0,72,1511	0/0:23,0:23:69.24:0,69,1509	0/0:30,0:30:87.30:0,87,1681	0/0:23,2:21:1.02:0,1,2	0/0:27,0:26:72.24:0,72,1566	1/1:19,4:21:0.58:1,1,0	0/0:28,5:19:0.81:0,1,1	0/1:23,13:28:42.78:43,0,93	0/0:20,0:19:44.01:0,44,913	0/0:27,0:27:72.25:0,72,1559	0/1:11,3:10:93.33:203,0,93	1/1:71,12:67:8.04:87,8,0	./.	0/0:79,6:74:1.51:0,2,3	1/1:58,3:54:1.99:4,2,0	0/0:14,1:12:0:0,0,0	0/0:45,0:45:99:0,132,2841	0/1:36,15:46:99:757,0,458	0/1:30,11:30:76.47:178,0,76	0/1:7,3:7:23.61:72,0,24
chr10	100637638	.	C	CT	1426.22	PASS	AB=0.820;AC=17;AF=0.315;AN=54;BaseQRankSum=10.959;DP=877;FS=3.324;HRun=1;HaplotypeScore=236.8248;InbreedingCoeff=0.1450;MQ=36.65;MQ0=13;MQRankSum=-10.684;QD=3.51;ReadPosRankSum=-0.360;VQSLOD=-0.2720;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:4,12:16:2.78:41,0,3	0/1:18,10:18:7.10:43,0,7	0/0:26,0:4:12.01:0,12,147	0/0:17,0:4:9.03:0,9,126	0/0:56,10:59:0.95:0,1,38	1/1:24,6:24:7.22:59,7,0	1/1:9,7:15:0.33:1,0,0	0/1:14,5:12:53.33:166,0,53	0/0:27,0:27:72.22:0,72,987	0/0:24,0:24:72.24:0,72,993	0/0:29,0:29:87.29:0,87,1213	0/1:12,10:18:0.04:0,0,0	0/0:26,0:25:75.24:0,75,1032	0/0:8,15:21:0.13:0,0,0	0/0:18,15:19:0.55:0,1,1	0/1:28,6:26:29.18:29,0,71	0/0:20,0:19:44.68:0,45,599	0/0:26,0:26:72.24:0,72,1002	0/1:11,1:9:87.61:88,0,93	1/1:47,24:60:7.57:100,8,0	./.	0/0:47,34:71:1.08:0,1,3	1/1:27,29:50:2.09:4,2,0	0/0:6,7:10:0:0,0,0	0/0:45,0:45:99:0,135,1886	0/1:43,5:43:99:760,0,351	0/1:35,4:28:58.11:173,0,58	0/1:9,0:7:21.45:101,0,21
chr10	100637651	.	ATCTG	A	350.58	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=8.327;DP=854;FS=17.305;HRun=0;HaplotypeScore=261.3941;InbreedingCoeff=0.3011;MQ=37.59;MQ0=11;MQRankSum=-8.141;QD=1.07;ReadPosRankSum=-3.540;VQSLOD=0.2495;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:0.94:0,1,2	0/0:23,0:17:9.24:0,9,105	0/0:27,0:3:9.03:0,9,196	0/0:18,0:2:3.01:0,3,66	0/1:58,0:51:0.16:0,0,1	0/0:33,0:27:0.25:0,0,2	0/0:15,0:14:2.69:0,3,28	0/0:17,0:11:14.73:0,15,118	0/0:29,0:29:75.14:0,75,1716	0/0:28,0:28:84.22:0,84,1806	0/0:23,0:23:63.12:0,63,1502	0/0:25,1:22:6.92:0,7,50	0/0:28,0:27:78.14:0,78,1634	1/1:26,0:24:0.47:1,0,0	0/0:31,0:22:3.46:0,3,24	0/1:34,0:25:38.66:39,0,51	0/0:23,0:23:46.17:0,46,1127	0/0:26,0:26:77.94:0,78,1691	1/1:11,0:7:5.74:79,6,0	1/1:71,0:57:3.69:31,4,0	1/1:17,0:17:8.88:73,9,0	0/0:64,2:60:0.38:0,0,3	0/0:52,3:50:6.47:0,6,54	1/1:15,1:13:2.78:24,3,0	0/0:42,0:42:99:0,117,2785	0/1:44,0:38:99:178,0,216	0/1:38,0:27:33.21:33,0,78	0/1:12,0:10:33.91:34,0,72
chr10	100637663	.	A	ATCTG	2596.50	PASS	AB=0.957;AC=28;AF=0.519;AN=54;BaseQRankSum=8.390;DP=835;FS=0.000;HRun=0;HaplotypeScore=252.4912;InbreedingCoeff=0.3977;MQ=38.25;MQ0=9;MQRankSum=-8.363;QD=5.38;ReadPosRankSum=-3.894;VQSLOD=1.9052;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,2:19:0.03:0,0,0	0/1:18,2:14:32.29:75,0,32	0/0:20,0:3:9.03:0,9,142	./.	0/0:50,0:43:0.46:0,0,3	1/1:32,1:27:2.70:12,3,0	1/1:17,0:16:1.06:50,1,0	0/1:23,0:17:30.69:65,0,31	0/0:30,0:30:75.24:0,75,1234	0/0:29,0:29:84.15:0,84,1335	0/0:21,0:21:60.21:0,60,1059	1/1:24,2:23:9.41:178,9,0	0/0:27,0:26:74.91:0,75,1144	1/1:18,5:21:0.46:1,0,0	1/1:32,0:24:5.96:92,6,0	0/1:31,1:25:26.60:188,0,27	0/0:27,0:27:42.95:0,43,828	0/0:29,0:29:75.21:0,75,1268	1/1:10,2:9:6.44:194,6,0	1/1:66,1:55:8.26:121,8,0	1/1:15,1:16:9.50:148,10,0	0/0:59,7:60:1.59:0,2,5	1/1:43,11:51:6:136,6,0	1/1:18,0:17:3.48:49,3,0	0/0:38,0:38:99:0,108,1896	0/1:42,2:38:48.06:981,0,48	1/1:33,0:25:20.52:248,21,0	0/1:12,0:10:2.16:228,0,2
chr10	100637666	.	TGTCTATC	T	284.38	PASS	AB=0.965;AC=11;AF=0.196;AN=56;BaseQRankSum=5.426;DP=819;FS=0.000;HRun=0;HaplotypeScore=274.4373;InbreedingCoeff=-0.0363;MQ=39.10;MQ0=9;MQRankSum=-2.307;QD=1.00;ReadPosRankSum=-5.957;VQSLOD=0.5909;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:4.48:0,4,25	0/1:21,0:15:16.35:16,0,83	0/0:20,0:3:9.03:0,9,134	0/0:12,0:1:2.97:0,3,20	0/1:45,0:39:1.23:1,0,2	0/1:29,0:24:0.18:0,0,0	0/0:17,0:16:0.97:0,1,20	0/0:21,0:16:44.86:0,45,532	0/0:30,0:30:48.56:0,49,1525	0/0:29,0:29:87.26:0,87,2354	0/0:21,0:21:63.20:0,63,1697	0/0:27,0:25:16.39:0,16,162	0/0:27,0:26:78.22:0,78,2016	1/1:23,0:21:1.48:3,1,0	0/0:33,0:25:11.75:0,12,89	0/1:32,0:24:29.42:29,0,149	0/1:27,0:27:16.16:16,0,885	0/0:27,0:27:75.26:0,75,2112	0/1:7,6:10:99:225,0,157	0/1:67,0:55:33.13:95,0,33	0/1:17,0:17:13.11:13,0,103	0/0:67,0:62:3.95:0,4,39	0/0:55,0:52:7.09:0,7,90	0/0:19,0:18:11.98:0,12,133	0/0:39,0:39:99:0,117,3283	0/0:40,0:35:80.88:0,81,1426	0/0:30,0:25:17.17:0,17,312	0/1:9,0:8:8.87:9,0,171
chr10	100637822	.	AG	A	14128.10	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=17.935;DP=799;FS=2.449;HRun=5;HaplotypeScore=120.2839;InbreedingCoeff=0.9939;MQ=84.68;MQ0=0;MQRankSum=-6.483;QD=26.11;ReadPosRankSum=0.769;VQSLOD=3.3509;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,47:49:99:1361,120,0	1/1:0,10:8:18.05:204,18,0	0/0:27,0:27:78.26:0,78,1062	0/0:32,0:33:80.43:0,80,998	1/1:3,27:28:54.15:612,54,0	1/1:0,22:19:51.15:578,51,0	1/1:4,25:29:60.17:680,60,0	1/1:4,25:29:75.18:832,75,0	0/0:35,0:35:93.25:0,93,1207	0/0:31,0:31:90.29:0,90,1217	0/0:23,0:23:66.17:0,66,852	1/1:2,29:30:75.14:829,75,0	0/0:28,0:28:84.28:0,84,1149	1/1:1,26:27:75.21:849,75,0	1/1:0,30:27:66.19:748,66,0	1/1:2,30:31:69.20:782,69,0	0/0:36,0:36:93.30:0,93,1257	0/0:16,0:16:45.15:0,45,613	1/1:1,15:16:45.13:510,45,0	1/1:1,39:38:99:1122,99,0	1/1:4,54:58:99:1599,141,0	1/1:2,30:26:45.13:510,45,0	1/1:0,21:21:57.16:646,57,0	1/1:1,22:22:57.16:646,57,0	0/0:29,0:29:78.26:0,78,1066	1/1:3,29:29:34.21:767,34,0	1/1:3,22:25:63.18:714,63,0	1/1:1,4:5:12.03:136,12,0
chr10	100639329	.	GA	G	9004.22	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=9.450;DP=526;FS=4.923;HRun=7;HaplotypeScore=68.8644;InbreedingCoeff=0.9878;MQ=83.69;MQ0=0;MQRankSum=-4.287;QD=25.73;ReadPosRankSum=2.279;VQSLOD=5.7188;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:69.07:682,69,0	1/1:1,8:9:21:200,21,0	0/0:20,1:21:26.39:0,26,584	0/0:15,0:15:33.02:0,33,377	1/1:2,28:30:78.17:796,78,0	1/1:1,18:19:51.12:520,51,0	1/1:2,8:10:24.05:245,24,0	1/1:2,20:22:57.13:582,57,0	0/0:14,0:14:39.12:0,39,491	0/0:23,0:23:63.18:0,63,778	0/0:20,0:20:48.15:0,48,604	1/1:3,10:13:30.06:306,30,0	0/0:28,0:28:78.23:0,78,959	1/1:3,20:23:63.13:636,63,0	1/1:5,15:20:45.03:446,45,0	1/1:0,18:18:54.12:551,54,0	0/0:24,0:24:62.69:0,63,792	0/0:19,0:19:44.17:0,44,531	1/1:2,14:16:42.10:428,42,0	1/1:3,24:27:63.07:630,63,0	1/1:0,8:8:18.04:184,18,0	1/1:1,10:11:30.07:306,30,0	1/1:2,9:11:27.04:268,27,0	1/1:3,9:12:27.06:275,27,0	0/0:12,0:12:30.10:0,30,377	1/1:5,21:26:28.40:605,28,0	1/1:2,45:47:99:1255,123,0	1/1:0,3:3:9.02:92,9,0
chr10	100639391	.	G	GA	3479.73	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-3.682;DP=592;FS=3.829;HRun=9;HaplotypeScore=69.6893;InbreedingCoeff=0.9796;MQ=73.36;MQ0=0;MQRankSum=-0.837;QD=23.20;ReadPosRankSum=0.729;VQSLOD=4.6082;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,19:24:63.05:654,63,0	1/1:2,0:7:17.21:98,17,0	0/0:16,0:16:38.46:0,38,337	0/0:5,0:5:8.99:0,9,78	0/0:39,1:41:67.77:0,68,801	0/0:33,0:33:92.96:0,93,804	0/0:12,0:12:26.96:0,27,230	0/0:30,1:31:61.16:0,61,655	0/0:13,0:13:32.99:0,33,285	0/0:28,0:28:77.96:0,78,673	0/0:35,0:35:92.95:0,93,807	1/1:1,18:20:50.90:530,51,0	0/0:23,0:23:62.99:0,63,547	1/1:5,23:28:20.21:668,20,0	1/1:4,2:26:51.47:293,51,0	0/0:25,0:25:71.94:0,72,615	0/0:24,1:25:29.79:0,30,488	0/0:19,0:19:47.93:0,48,410	0/0:19,0:19:41.94:0,42,358	0/0:25,0:26:74.02:0,74,631	0/0:5,0:5:12:0,12,104	1/1:1,12:13:32.96:335,33,0	1/1:2,17:20:50.97:545,51,0	1/1:1,11:12:33.07:356,33,0	0/0:15,0:15:44.99:0,45,390	0/0:29,0:29:71.90:0,72,613	0/0:36,0:36:98.98:0,99,860	0/0:5,0:5:15:0,15,130
chr10	100639875	.	GA	G	4937.39	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=16.942;DP=741;FS=1.057;HRun=6;HaplotypeScore=94.5220;InbreedingCoeff=0.9937;MQ=67.30;MQ0=0;MQRankSum=-0.757;QD=27.58;ReadPosRankSum=3.215;VQSLOD=5.1049;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,49:50:99:1416,132,0	0/0:12,0:12:33.10:0,33,419	0/0:27,0:25:37.04:0,37,558	0/0:29,0:24:37.12:0,37,457	0/0:32,0:32:87.27:0,87,1123	0/0:16,0:16:45.15:0,45,583	0/0:33,0:33:90.27:0,90,1142	0/0:24,0:23:66.19:0,66,824	0/0:30,0:30:87.27:0,87,1108	0/0:29,0:29:81.26:0,81,1046	0/0:23,0:23:54.15:0,54,676	1/1:1,24:25:66.15:700,66,0	0/0:24,0:24:72.23:0,72,927	1/1:3,23:26:57.10:599,57,0	0/0:29,0:29:84.23:0,84,1076	0/0:34,0:33:96.26:0,96,1209	0/0:33,0:33:87.22:0,87,1075	0/0:25,0:25:64.25:0,64,842	0/0:14,0:13:36.10:0,36,443	0/0:24,0:24:66.19:0,66,832	0/0:33,0:33:89.45:0,89,1107	1/1:2,23:25:66.17:708,66,0	1/1:2,18:20:51.13:547,51,0	1/1:2,31:33:90.23:966,90,0	0/0:31,0:31:90.29:0,90,1174	0/0:29,0:29:81.24:0,81,1023	0/0:26,0:25:78.17:0,78,954	0/0:4,0:4:12.04:0,12,157
chr10	100640250	.	A	AG	7856.24	PASS	AB=0.535;AC=21;AF=0.375;AN=56;BaseQRankSum=-16.227;DP=565;FS=4.399;HRun=0;HaplotypeScore=68.2581;InbreedingCoeff=0.9230;MQ=81.42;MQ0=0;MQRankSum=-2.196;QD=34.61;ReadPosRankSum=0.375;VQSLOD=4.1246;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1342	0/0:7,0:7:21.07:0,21,292	0/0:19,0:19:49.47:0,49,516	0/0:14,0:14:28.20:0,28,389	1/1:0,23:23:63.20:900,63,0	1/1:0,17:17:42.14:599,42,0	1/1:0,14:14:27.09:386,27,0	1/1:2,31:33:93.29:1313,93,0	0/0:14,0:14:39.11:0,39,513	0/0:37,0:37:99:0,105,1414	0/0:22,0:22:66.18:0,66,856	0/0:20,0:20:60.18:0,60,804	0/0:27,0:27:81.19:0,81,1071	0/0:17,0:17:51.13:0,51,673	0/0:25,0:25:75.13:0,75,1002	1/1:0,28:28:75.25:1071,75,0	0/0:15,0:15:45.07:0,45,588	0/0:18,0:18:54.16:0,54,736	1/1:3,14:17:42.05:508,42,0	1/1:0,19:19:44.98:592,45,0	1/1:0,17:17:30.10:429,30,0	0/0:13,0:13:39.09:0,39,509	0/0:27,0:27:81.09:0,81,1048	0/0:12,0:12:36.12:0,36,502	0/0:15,0:15:45.14:0,45,614	0/1:3,20:23:17.63:773,0,18	1/1:0,29:29:72.24:1028,72,0	1/1:0,7:7:18.06:257,18,0
chr10	100640717	.	AAAGT	A	379.57	PASS	AB=0.600;AC=15;AF=0.313;AN=48;BaseQRankSum=3.344;DP=141;FS=11.246;HRun=0;HaplotypeScore=23.6645;InbreedingCoeff=0.5700;MQ=49.54;MQ0=10;MQRankSum=-0.842;QD=15.18;ReadPosRankSum=1.814;VQSLOD=0.8876;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:12.04:230,12,0	1/1:0,0:1:2.68:11,3,0	./.	./.	0/0:2,0:2:6:0,6,86	0/0:6,0:6:15.03:0,15,348	0/0:6,0:6:8.95:0,9,102	0/0:24,0:21:56.83:0,57,598	0/0:7,0:7:21.01:0,21,284	0/0:5,0:5:15.01:0,15,135	./.	1/1:1,0:1:3.01:49,3,0	./.	1/1:0,3:3:3.01:58,3,0	1/1:2,0:2:3:27,3,0	0/0:4,0:4:8.99:0,9,76	0/0:12,0:12:33.05:0,33,643	0/0:12,0:12:4.50:0,5,701	0/0:7,0:7:20.95:0,21,226	0/0:2,0:2:6:0,6,105	0/0:2,0:2:5.99:0,6,48	1/1:1,0:1:3:25,3,0	1/1:0,3:3:5.93:75,6,0	0/1:1,2:3:5.63:52,0,6	0/0:1,0:1:3.01:0,3,81	0/0:6,0:5:15.01:0,15,188	0/0:3,0:3:8.98:0,9,73	0/0:5,0:5:12.02:0,12,266
chr10	100640720	.	G	GTAAA	191.78	PASS	AC=4;AF=0.118;AN=34;BaseQRankSum=-0.898;DP=135;FS=1.901;HRun=0;HaplotypeScore=29.2144;InbreedingCoeff=0.2755;MQ=49.89;MQ0=9;MQRankSum=1.316;QD=19.18;ReadPosRankSum=0.128;VQSLOD=2.8594;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:12.01:0,12,110	./.	./.	./.	1/1:1,1:2:3.01:71,3,0	0/0:5,0:5:12.04:0,12,186	0/0:6,0:6:1.98:0,2,22	0/0:23,0:20:3:0,3,25	1/1:5,3:8:9.03:212,9,0	./.	./.	0/0:1,0:1:0.47:0,0,1	./.	0/0:3,0:3:3:0,3,28	./.	./.	0/0:13,0:13:2.35:0,2,294	0/0:12,0:12:5.52:0,6,394	0/0:8,0:7:3.01:0,3,46	0/0:2,0:2:3.01:0,3,46	./.	./.	0/0:3,0:3:3:0,3,28	0/0:3,0:3:5.04:0,5,34	0/0:1,0:1:3.01:0,3,47	0/0:4,0:4:3.01:0,3,46	./.	0/0:5,0:5:9.03:0,9,139
chr10	100640805	.	A	AT	4700.05	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-12.697;DP=324;FS=0.527;HRun=8;HaplotypeScore=33.1256;InbreedingCoeff=0.9065;MQ=77.45;MQ0=0;MQRankSum=-2.257;QD=29.19;ReadPosRankSum=0.218;VQSLOD=4.4116;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:36.02:0,36,329	0/0:4,0:4:12.01:0,12,110	0/1:10,0:10:8.63:9,0,46	0/0:8,0:7:14.36:0,14,113	1/1:1,19:20:60.18:687,60,0	1/1:1,13:14:33.10:381,33,0	1/1:0,5:5:12.04:138,12,0	1/1:5,25:30:75.20:854,75,0	0/0:11,0:11:27:0,27,247	0/0:13,0:13:39.02:0,39,357	0/0:9,0:9:24.01:0,24,220	0/0:6,0:6:18.01:0,18,165	0/0:7,0:7:21.01:0,21,192	0/0:8,0:8:24.01:0,24,220	0/0:8,0:8:24.01:0,24,220	1/1:0,4:4:12.04:139,12,0	0/0:18,0:18:54.03:0,54,494	0/0:23,0:23:57.03:0,57,521	1/1:4,9:13:27.08:311,27,0	1/1:0,14:14:39.12:450,39,0	1/1:0,7:7:21.06:242,21,0	0/0:6,0:6:18.01:0,18,165	0/0:12,0:12:36.02:0,36,330	0/0:3,0:3:9:0,9,82	0/0:14,0:14:42.02:0,42,384	1/1:0,14:14:42.12:485,42,0	1/1:0,15:15:45.13:519,45,0	1/1:0,15:15:42.12:485,42,0
chr10	100641539	.	GA	G	3855.06	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.581;DP=671;FS=0.746;HRun=7;HaplotypeScore=63.7503;InbreedingCoeff=0.9995;MQ=89.62;MQ0=0;MQRankSum=-3.835;QD=27.54;ReadPosRankSum=2.416;VQSLOD=4.4275;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:66.15:673,66,0	1/1:0,9:9:27.06:275,27,0	0/0:25,0:25:69.17:0,69,801	0/0:26,1:27:34.58:0,35,698	0/0:35,0:35:99:0,105,1320	0/0:38,0:38:99:0,105,1292	0/0:16,0:16:45.10:0,45,548	0/0:33,0:33:90.21:0,90,1069	0/0:28,0:28:84.21:0,84,1016	0/0:25,0:25:72.22:0,72,896	0/0:33,0:33:96.29:0,96,1193	1/1:1,15:16:45.10:459,45,0	0/0:27,0:27:75.24:0,75,944	1/1:2,17:19:48.10:490,48,0	1/1:0,16:16:45.10:459,45,0	0/0:22,0:22:60.19:0,60,755	0/0:22,0:22:63.19:0,63,780	0/0:17,0:17:48.06:0,48,567	0/0:22,0:22:60.17:0,60,717	0/0:42,0:42:99:0,120,1485	0/0:25,0:25:72.23:0,72,905	1/1:3,18:21:51.11:520,51,0	1/1:2,22:24:66.14:673,66,0	1/1:1,11:12:30.06:306,30,0	0/0:25,0:25:72.21:0,72,881	0/0:30,0:30:87.28:0,87,1095	0/0:30,0:30:84.27:0,84,1057	0/0:9,0:9:26.99:0,27,280
chr10	100642509	.	T	TTTC	1625.29	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=7.826;DP=430;FS=4.730;HRun=0;HaplotypeScore=60.1758;InbreedingCoeff=0.8291;MQ=48.41;MQ0=27;MQRankSum=-2.937;QD=22.89;ReadPosRankSum=2.042;VQSLOD=3.0460;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,9:14:3.18:521,3,0	1/1:5,0:4:5.04:40,5,0	0/0:1,0:1:3.01:0,3,51	0/0:4,0:3:9.02:0,9,129	0/0:30,0:26:63.11:0,63,974	0/0:30,0:28:72.20:0,72,1167	0/0:13,0:11:27.09:0,27,445	0/0:33,0:32:85.49:0,85,1360	0/0:7,0:7:18.03:0,18,275	0/0:13,0:13:39.13:0,39,658	0/0:16,0:14:36.12:0,36,597	1/1:4,10:12:9.03:209,9,0	0/0:7,0:7:21.04:0,21,326	1/1:2,9:10:21.07:483,21,0	1/1:10,0:9:7.92:62,8,0	0/0:11,0:11:27.08:0,27,421	0/0:36,0:32:81.19:0,81,1286	0/0:27,0:23:50.73:0,51,828	0/0:19,0:18:48.09:0,48,720	0/0:21,0:20:54.18:0,54,877	0/0:9,0:6:15.03:0,15,227	1/1:1,1:1:3.01:70,3,0	1/1:1,3:3:9.03:209,9,0	1/1:2,5:5:9.03:210,9,0	0/0:21,0:18:48.08:0,48,706	0/0:22,0:21:51.09:0,51,780	0/0:31,0:30:84.26:0,84,1354	0/0:8,0:7:20.81:0,21,318
chr10	100643438	.	CAT	C	2159.64	PASS	AB=0.991;AC=21;AF=0.375;AN=56;BaseQRankSum=8.334;DP=592;FS=40.608;HRun=0;HaplotypeScore=117.8681;InbreedingCoeff=0.6377;MQ=58.21;MQ0=24;MQRankSum=-1.912;QD=6.88;ReadPosRankSum=-1.110;VQSLOD=1.3203;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:36:53.21:385,53,0	1/1:6,0:6:17.83:130,18,0	0/0:27,0:15:14.37:0,14,313	0/0:36,0:17:27.62:0,28,298	0/0:14,0:14:20.92:0,21,163	0/0:17,0:17:20.97:0,21,230	0/0:20,0:20:44.79:0,45,350	0/0:26,0:25:68.53:0,69,554	0/1:15,0:14:8.74:9,0,176	0/0:16,0:15:6.85:0,7,273	0/0:8,0:8:7.53:0,8,86	1/1:27,4:28:38.18:278,38,0	0/1:19,0:19:0.18:0,0,277	1/1:26,2:27:33.51:235,34,0	1/1:10,2:11:23.82:181,24,0	0/1:18,0:16:1.95:2,0,160	0/1:32,0:29:26.60:27,0,564	0/0:25,0:24:3.33:0,3,414	0/0:13,0:13:36.85:0,37,311	0/0:14,0:13:35.94:0,36,296	0/0:29,0:27:68.79:0,69,549	1/1:29,1:29:47.55:353,48,0	1/1:31,2:30:57.29:421,57,0	1/1:22,3:25:41.26:326,41,0	0/1:21,1:22:13.58:14,0,422	0/0:13,0:12:35.53:0,36,275	0/0:14,0:13:23.58:0,24,260	0/0:5,0:5:12.82:0,13,91
chr10	100643440	.	TAC	T	164.70	PASS	AB=0.893;AC=16;AF=0.421;AN=38;BaseQRankSum=1.940;DP=608;FS=1.123;HRun=0;HaplotypeScore=127.7559;InbreedingCoeff=-0.1082;MQ=54.64;MQ0=27;MQRankSum=0.266;QD=0.70;ReadPosRankSum=2.275;VQSLOD=1.9953;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:7:2.96:0,3,19	./.	./.	./.	./.	0/1:19,0:21:0.04:0,0,0	./.	0/1:13,3:15:48.29:48,0,96	0/1:16,1:16:19.58:45,0,20	0/1:6,4:10:18.89:26,0,19	1/1:32,0:28:2.10:21,2,0	0/1:20,2:22:41.39:41,0,127	0/0:28,0:27:2.96:0,3,19	0/0:14,0:12:1.25:0,1,3	1/1:15,0:17:1.99:13,2,0	0/1:31,2:30:53.94:54,0,238	0/0:25,0:25:16.13:0,16,187	./.	1/1:14,0:14:0.47:1,0,0	0/0:29,0:27:2.22:0,2,7	./.	0/0:30,0:27:2.97:0,3,20	1/1:26,0:26:2.72:13,3,0	0/0:22,0:22:1.81:0,2,224	./.	0/1:16,0:16:3.68:4,0,30	0/1:6,0:6:6.94:7,0,12
chr10	100643490	.	CACACAT	C	240.04	PASS	AB=0.975;AC=8;AF=0.143;AN=56;BaseQRankSum=5.567;DP=735;FS=0.000;HRun=0;HaplotypeScore=207.9781;InbreedingCoeff=0.3812;MQ=54.74;MQ0=29;MQRankSum=-3.408;QD=1.95;ReadPosRankSum=0.733;VQSLOD=2.4821;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:27:15.53:0,16,91	1/1:5,0:5:12.42:95,12,0	0/0:45,0:23:68.86:0,69,633	0/0:48,0:25:65.46:0,65,637	0/0:33,0:33:83.68:0,84,661	0/0:15,0:15:30.20:0,30,230	0/0:22,0:21:38.22:0,38,319	0/0:21,0:20:36.46:0,36,415	0/0:20,0:19:41.75:0,42,730	0/0:26,0:24:66.93:0,67,708	0/0:20,0:19:41.98:0,42,444	0/1:30,2:31:99:137,0,129	0/0:22,0:22:51.91:0,52,935	0/1:28,0:28:34.04:34,0,140	1/1:14,0:12:4.17:94,4,0	0/0:25,0:24:23.41:0,23,382	0/0:36,0:34:92.83:0,93,1431	0/0:41,0:38:88.17:0,88,1218	0/0:20,0:18:49.30:0,49,402	0/0:25,0:24:59.39:0,59,511	0/0:29,0:26:59.77:0,60,523	0/0:42,1:40:31.87:0,32,186	0/0:24,1:25:11.87:0,12,62	0/1:23,1:24:4.06:4,0,103	0/0:29,0:29:72.01:0,72,1249	0/0:22,0:20:55.93:0,56,478	0/1:20,0:19:4.33:4,0,288	0/0:13,0:13:15.76:0,16,255
chr10	100643517	.	GGCA	G	2948.15	PASS	AB=0.600;AC=11;AF=0.196;AN=56;BaseQRankSum=14.501;DP=658;FS=16.993;HRun=0;HaplotypeScore=155.1731;InbreedingCoeff=0.8859;MQ=66.43;MQ0=4;MQRankSum=-13.356;QD=19.27;ReadPosRankSum=-9.161;VQSLOD=0.0317;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:25:44.58:464,45,0	0/0:7,0:7:21.07:0,21,456	0/0:32,0:26:65.89:0,66,1304	0/0:34,0:26:52.72:0,53,1283	0/0:33,0:33:99:0,99,2202	0/0:19,0:19:54.19:0,54,1189	0/0:21,0:21:60.21:0,60,1337	0/0:25,0:25:75.26:0,75,1685	0/0:13,0:13:39.13:0,39,871	0/0:27,0:27:81.28:0,81,1829	0/0:22,0:22:60.21:0,60,1312	1/1:3,22:27:56.67:614,57,0	0/0:20,0:20:54.19:0,54,1171	1/1:3,22:25:59.75:598,60,0	0/0:13,0:12:30.10:0,30,674	0/0:25,0:25:63.22:0,63,1412	0/0:26,0:26:75.22:0,75,1574	0/0:27,0:27:78.27:0,78,1713	0/0:18,0:18:48.15:0,48,986	0/0:27,0:26:71.71:0,72,1569	0/0:28,0:28:75.17:0,75,1623	1/1:3,32:35:84.09:858,84,0	1/1:1,16:18:44.65:485,45,0	0/1:7,14:21:99:107,0,121	0/0:28,0:28:78.27:0,78,1743	0/0:27,0:27:81.28:0,81,1805	0/0:18,0:17:51.18:0,51,1151	0/0:15,0:15:42.14:0,42,934
chr10	100645649	.	ATGTGTGTGTGTGTG	A	542.07	PASS	AC=10;AF=0.294;AN=34;BaseQRankSum=3.185;DP=137;FS=0.000;HRun=0;HaplotypeScore=44.4581;InbreedingCoeff=0.4704;MQ=37.60;MQ0=8;MQRankSum=1.341;QD=12.32;ReadPosRankSum=0.545;VQSLOD=1.1786;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:7:6.02:0,6,336	./.	./.	./.	./.	./.	1/1:3,2:5:3.01:114,3,0	1/1:15,5:20:14.82:195,15,0	./.	0/0:6,0:5:9.03:0,9,293	0/0:1,0:1:3.01:0,3,175	0/0:8,0:7:0:0,0,0	0/0:2,0:2:6.02:0,6,340	0/0:5,0:5:5.51:0,6,95	./.	./.	0/0:13,0:10:12.02:0,12,483	0/0:7,0:7:12.04:0,12,510	1/1:3,0:4:3.01:116,3,0	./.	./.	./.	0/0:2,0:2:3.01:0,3,175	0/0:3,0:3:3.01:0,3,168	0/0:5,0:5:3.01:0,3,175	0/0:5,0:4:5.05:0,5,115	1/1:3,1:4:3.01:116,3,0	1/1:10,1:11:3:115,3,0
chr10	100647122	.	T	TCACATTACA	35788.86	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-5.466;DP=575;FS=0.000;HRun=0;HaplotypeScore=151.5563;InbreedingCoeff=0.9933;MQ=81.47;MQ0=0;MQRankSum=-15.561;QD=89.03;ReadPosRankSum=1.054;VQSLOD=4.5723;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,17:25:54.19:2412,54,0	1/1:2,6:8:18.06:787,18,0	0/0:22,0:22:45.15:0,45,1107	0/0:27,0:27:69.10:0,69,1604	1/1:5,14:20:39.13:1557,39,0	1/1:3,9:14:30.10:1360,30,0	1/1:8,9:18:42.08:1515,42,0	1/1:14,9:25:69.21:2622,69,0	0/0:12,0:12:33.11:0,33,901	0/0:28,0:28:78.26:0,78,2148	0/0:6,0:6:15.05:0,15,422	1/1:7,15:24:42.14:1817,42,0	0/0:23,0:23:57.20:0,57,1612	1/1:7,18:25:69.24:2960,69,0	1/1:8,21:31:78.27:3178,78,0	1/1:7,16:28:57.20:2387,57,0	0/0:18,0:18:51.14:0,51,1412	0/0:17,0:17:48.16:0,48,1356	1/1:6,11:17:42.14:1727,42,0	1/1:10,12:23:54.19:2048,54,0	1/1:16,9:29:33.58:1253,34,0	1/1:8,16:25:66.19:2269,66,0	1/1:5,14:21:41.92:1816,42,0	1/1:8,11:20:36.12:1471,36,0	0/0:20,0:20:48.64:0,49,1345	1/1:9,15:27:72.23:2974,72,0	1/1:6,8:17:24.08:997,24,0	1/1:4,1:5:15.05:640,15,0
chr10	100647745	.	A	AG	9710.97	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=16.936;DP=596;FS=1.120;HRun=3;HaplotypeScore=159.7405;InbreedingCoeff=0.9822;MQ=70.01;MQ0=0;MQRankSum=-7.700;QD=22.53;ReadPosRankSum=-0.373;VQSLOD=3.9196;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,11:34:72.73:711,73,0	1/1:12,1:13:28.89:313,29,0	0/0:18,0:18:45.06:0,45,537	0/0:8,0:8:23.52:0,24,239	1/1:13,7:20:35.34:390,35,0	1/1:15,5:20:53.74:528,54,0	1/1:12,14:26:64.68:619,65,0	1/1:7,26:31:79.96:603,80,0	0/0:19,0:19:57.17:0,57,684	0/0:24,0:24:72.22:0,72,864	0/0:17,0:17:48.13:0,48,565	1/1:19,4:24:65.26:648,65,0	0/0:18,0:18:51.14:0,51,599	1/1:15,9:24:58.48:556,58,0	1/1:20,4:24:58.41:686,58,0	1/1:23,4:27:67.64:690,68,0	0/0:25,0:25:72.22:0,72,864	0/0:16,0:16:48.07:0,48,534	1/1:10,11:21:44.99:521,45,0	1/1:13,13:26:64.65:587,65,0	1/1:18,7:25:44.50:465,44,0	1/1:11,11:22:57.76:481,58,0	1/1:10,7:17:21.65:307,22,0	1/1:20,4:24:48.17:514,48,0	0/0:20,0:20:54.14:0,54,635	1/1:19,10:29:71.53:707,72,0	1/1:10,10:18:43.11:349,43,0	1/1:0,2:2:5.88:36,6,0
chr10	100647754	.	TA	T	10569.10	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=17.461;DP=587;FS=0.000;HRun=1;HaplotypeScore=155.3378;InbreedingCoeff=0.9823;MQ=68.92;MQ0=0;MQRankSum=-5.213;QD=25.53;ReadPosRankSum=-0.848;VQSLOD=4.3506;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,13:39:97.49:974,97,0	1/1:8,3:11:29.64:346,30,0	0/0:18,0:17:45.50:0,45,619	0/0:8,0:8:21.04:0,21,309	1/1:8,8:16:31.14:278,31,0	1/1:14,5:19:53.71:540,54,0	1/1:11,12:23:62.29:609,62,0	1/1:0,34:32:89.17:704,89,0	0/0:24,0:24:72.25:0,72,1143	0/0:24,0:24:69.23:0,69,1082	0/0:17,0:17:51.16:0,51,791	1/1:19,5:24:68.30:703,68,0	0/0:21,0:21:63.21:0,63,992	1/1:13,8:21:58.56:545,59,0	1/1:17,5:22:64.43:780,64,0	1/1:20,5:25:70.70:757,71,0	0/0:27,0:27:81.28:0,81,1294	0/0:17,0:17:51.15:0,51,788	1/1:6,10:16:42.86:492,43,0	1/1:15,12:27:73.55:623,74,0	1/1:16,6:22:47.53:477,48,0	1/1:9,13:22:64.11:535,64,0	1/1:10,9:19:31.49:427,31,0	1/1:18,3:21:42.71:454,43,0	0/0:17,0:16:51.17:0,51,809	1/1:16,13:29:74.69:761,75,0	1/1:8,14:22:55.37:533,55,0	1/1:0,2:2:5.82:32,6,0
chr10	100647891	.	TG	T	1230.89	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.918;DP=640;FS=8.570;HRun=5;HaplotypeScore=74.2501;InbreedingCoeff=0.9787;MQ=59.41;MQ0=3;MQRankSum=3.150;QD=27.97;ReadPosRankSum=1.925;VQSLOD=3.8946;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,141,1905	1/1:0,8:8:21.06:238,21,0	0/0:27,0:16:45.13:0,45,553	0/0:24,0:13:19.15:0,19,363	0/0:28,0:28:81.26:0,81,1092	0/0:19,0:19:57.19:0,57,779	0/0:22,0:22:66.21:0,66,889	0/0:29,0:26:69.14:0,69,850	0/0:24,0:24:69.22:0,69,930	0/0:21,0:21:63.20:0,63,841	0/0:25,0:25:63.21:0,63,860	0/0:31,0:31:90.30:0,90,1230	0/0:16,0:16:48.15:0,48,637	0/0:18,0:18:51.17:0,51,697	1/1:3,33:36:99:1113,99,0	0/0:23,0:23:66.22:0,66,902	0/0:22,0:22:63.16:0,63,809	0/0:19,0:19:54.15:0,54,718	0/0:13,0:11:30.10:0,30,407	0/0:26,0:25:72.21:0,72,952	0/0:19,0:19:54.17:0,54,724	0/0:27,0:26:78.25:0,78,1052	0/0:11,0:11:33.11:0,33,451	0/0:17,0:17:51.10:0,51,658	0/0:24,0:24:63.20:0,63,846	0/0:31,0:31:90.25:0,90,1195	0/0:25,0:24:66.22:0,66,902	0/0:4,0:4:12.04:0,12,164
chr10	100650466	.	CA	C	16746.33	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=10.611;DP=722;FS=0.000;HRun=3;HaplotypeScore=70.8537;InbreedingCoeff=0.9993;MQ=83.79;MQ0=0;MQRankSum=-3.445;QD=34.11;ReadPosRankSum=2.600;VQSLOD=5.4028;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:93.29:1152,93,0	1/1:0,9:9:24.08:297,24,0	0/0:21,0:21:60.17:0,60,805	0/0:26,0:26:66.22:0,66,937	1/1:0,41:41:99:1432,117,0	1/1:0,23:23:60.19:744,60,0	1/1:1,18:19:51.16:632,51,0	1/1:2,36:38:99:1303,108,0	0/0:28,0:28:84.27:0,84,1189	0/0:42,0:42:99:0,114,1626	0/0:27,0:27:78.25:0,78,1104	1/1:0,30:30:84.26:1041,84,0	0/0:28,0:28:84.26:0,84,1173	1/1:3,26:29:72.23:891,72,0	1/1:2,33:35:93.29:1153,93,0	1/1:2,27:29:38.04:923,38,0	0/0:23,0:23:66.19:0,66,929	0/0:22,0:22:57.15:0,57,797	1/1:1,21:22:63.18:759,63,0	1/1:1,28:29:84.26:1041,84,0	1/1:0,26:26:72.23:892,72,0	1/1:1,13:14:39.12:483,39,0	1/1:0,13:13:39.12:483,39,0	1/1:1,27:28:75.24:930,75,0	0/0:14,0:14:36.12:0,36,518	1/1:0,23:23:69.20:842,69,0	1/1:0,42:42:99:1450,117,0	1/1:0,8:8:24.08:297,24,0
chr10	100651671	.	A	AC	11978.65	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=6.255;DP=681;FS=9.004;HRun=7;HaplotypeScore=89.9538;InbreedingCoeff=0.9718;MQ=68.88;MQ0=0;MQRankSum=-3.154;QD=27.22;ReadPosRankSum=0.449;VQSLOD=4.9263;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:34:72.22:870,72,0	1/1:1,10:11:27.08:326,27,0	0/0:26,0:22:52.98:0,53,488	0/0:29,0:28:63.40:0,63,573	1/1:4,27:31:66.13:774,66,0	1/1:3,30:33:81.11:953,81,0	1/1:4,21:25:50.32:646,50,0	1/1:12,19:31:59.99:664,60,0	0/0:29,0:29:78.12:0,78,753	0/0:30,0:30:78.12:0,78,753	0/0:23,0:23:56.30:0,56,506	1/1:2,17:19:19.17:514,19,0	0/0:25,0:25:66.09:0,66,632	1/1:2,21:23:48.15:578,48,0	1/1:1,26:27:63.19:761,63,0	1/1:1,22:22:51.16:616,51,0	0/0:30,0:30:75.05:0,75,708	0/0:30,0:30:69.10:0,69,666	1/1:3,21:25:72.03:822,72,0	1/1:2,16:18:41.98:469,42,0	1/1:2,25:27:51.16:616,51,0	1/1:3,19:22:54.08:631,54,0	1/1:3,17:20:45.14:537,45,0	1/1:2,16:18:48.15:580,48,0	0/0:19,0:19:45.02:0,45,421	1/1:2,28:30:81.24:970,81,0	1/1:2,18:20:51.16:616,51,0	1/1:1,1:2:3.01:36,3,0
chr10	100653670	.	T	TTGG	11556.96	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=6.432;DP=470;FS=0.752;HRun=0;HaplotypeScore=76.6704;InbreedingCoeff=0.9873;MQ=60.25;MQ0=2;MQRankSum=-8.038;QD=56.10;ReadPosRankSum=-0.984;VQSLOD=6.4267;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.14:0,42,684	1/1:1,3:4:12.04:241,12,0	0/0:8,0:7:17.99:0,18,262	0/0:8,0:8:24.03:0,24,310	1/1:1,16:17:45.15:959,45,0	1/1:1,17:18:51.17:1053,51,0	1/1:1,15:17:45.15:943,45,0	1/1:3,20:24:63.20:1360,63,0	0/0:16,0:16:48.16:0,48,784	0/0:23,0:23:60.20:0,60,966	0/0:31,0:31:81.26:0,81,1285	0/0:13,0:13:39.12:0,39,613	0/0:30,0:30:84.29:0,84,1359	0/0:13,0:13:39.13:0,39,637	1/1:1,15:16:42.14:937,42,0	1/1:1,13:16:42.14:879,42,0	0/0:23,0:23:60.16:0,60,951	0/0:7,0:7:21.05:0,21,317	1/1:6,22:27:66.20:1371,66,0	1/1:2,10:12:33.11:678,33,0	1/1:1,8:9:15.05:303,15,0	0/0:14,0:14:42.14:0,42,673	0/0:20,0:20:48.16:0,48,764	0/0:15,0:15:42.14:0,42,679	0/0:28,0:28:78.25:0,78,1242	1/1:2,19:21:60.21:1309,60,0	1/1:2,18:20:60.20:1256,60,0	1/1:0,4:4:12.04:268,12,0
chr10	100654060	.	C	CT	6263.88	PASS	AB=0.726;AC=37;AF=0.661;AN=56;BaseQRankSum=-10.028;DP=516;FS=2.898;HRun=11;HaplotypeScore=52.6446;InbreedingCoeff=0.6414;MQ=80.41;MQ0=0;MQRankSum=0.622;QD=16.79;ReadPosRankSum=-0.818;VQSLOD=5.3863;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,15:20:6.63:358,7,0	1/1:0,8:8:18.04:183,18,0	0/0:13,0:13:14.17:0,14,113	0/1:14,0:15:27.57:28,0,47	1/1:8,21:31:44.92:586,45,0	1/1:5,20:25:51.10:518,51,0	1/1:6,14:21:6.66:233,7,0	1/1:10,16:27:3.38:361,3,0	0/0:18,0:18:47.78:0,48,366	0/0:21,0:21:43.04:0,43,327	0/0:28,0:29:70.76:0,71,539	0/1:4,12:16:33.64:238,0,34	0/0:19,0:19:38.69:0,39,287	1/1:3,11:14:24.05:244,24,0	1/1:2,12:15:35.91:349,36,0	1/1:2,9:11:21.04:213,21,0	0/0:19,0:20:49.82:0,50,375	0/0:12,0:12:29.79:0,30,225	0/1:6,11:17:11.29:275,0,11	1/1:5,18:23:2.32:345,2,0	1/1:6,12:18:21.04:213,21,0	1/1:2,9:11:8.88:228,9,0	1/1:3,10:14:32.90:319,33,0	1/1:1,11:12:33.07:335,33,0	0/0:11,0:11:32.87:0,33,254	1/1:5,25:30:69.09:675,69,0	1/1:6,22:28:12.07:374,12,0	1/1:7,9:16:0.81:190,1,0
chr10	100654337	.	AC	A	8157.15	PASS	AB=0.549;AC=25;AF=0.446;AN=56;BaseQRankSum=13.490;DP=590;FS=10.349;HRun=6;HaplotypeScore=82.1578;InbreedingCoeff=0.9456;MQ=76.72;MQ0=0;MQRankSum=-2.195;QD=27.28;ReadPosRankSum=-0.057;VQSLOD=4.5365;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.20:0,63,829	1/1:1,9:10:24.06:258,24,0	0/0:23,0:18:15.36:0,15,412	0/0:19,0:14:29.12:0,29,277	1/1:4,17:21:45.11:482,45,0	1/1:0,25:25:72.18:774,72,0	1/1:0,17:17:45.11:483,45,0	1/1:4,32:36:90.19:950,90,0	0/0:18,0:18:51.17:0,51,669	0/0:19,0:18:41.86:0,42,519	0/0:19,0:19:57.17:0,57,723	0/0:25,0:25:72.23:0,72,946	0/0:29,0:29:75.24:0,75,986	0/0:22,0:22:48.63:0,49,631	1/1:2,22:24:57.14:612,57,0	1/1:2,18:20:51.13:548,51,0	0/0:11,0:11:33.11:0,33,434	0/0:7,0:7:21.07:0,21,276	1/1:0,28:28:84.21:902,84,0	1/1:2,30:32:81.20:869,81,0	1/1:3,16:19:45.11:484,45,0	0/0:13,0:13:36.09:0,36,443	0/0:19,0:19:54.16:0,54,695	0/0:26,0:26:75.24:0,75,986	0/0:17,0:17:51.17:0,51,671	0/1:5,23:28:3.77:666,0,4	1/1:2,30:32:84.21:903,84,0	1/1:0,7:7:21.05:226,21,0
chr10	100654563	.	A	AT	11747.01	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-14.671;DP=594;FS=5.445;HRun=8;HaplotypeScore=53.6002;InbreedingCoeff=0.9834;MQ=76.00;MQ0=0;MQRankSum=-0.531;QD=27.77;ReadPosRankSum=1.657;VQSLOD=5.4588;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:36.11:415,36,0	1/1:0,12:12:33.10:381,33,0	0/0:13,0:13:33.01:0,33,301	0/0:12,0:12:7.59:0,8,149	1/1:2,27:29:81.11:901,81,0	1/1:3,22:25:14.27:670,14,0	1/1:0,16:16:42.12:485,42,0	1/1:7,32:39:93.25:1060,93,0	0/0:20,0:20:51.01:0,51,462	0/0:30,0:30:74.97:0,75,676	0/0:21,0:21:60.01:0,60,543	1/1:2,22:24:38.73:700,39,0	0/0:18,0:18:42.02:0,42,384	1/1:1,26:27:72.21:831,72,0	1/1:1,26:27:75.22:866,75,0	1/1:2,14:16:39.12:450,39,0	0/0:16,0:16:45.02:0,45,412	0/0:20,0:20:60.01:0,60,543	1/1:9,13:22:39.08:429,39,0	1/1:3,24:27:66.11:731,66,0	1/1:4,7:11:21.06:242,21,0	1/1:2,21:23:54.16:623,54,0	1/1:4,21:25:51.04:588,51,0	1/1:2,10:13:29.92:326,30,0	0/0:21,0:21:60.02:0,60,545	1/1:4,28:32:59.79:942,60,0	1/1:1,30:32:75.09:865,75,0	1/1:0,7:7:21.06:242,21,0
chr10	100658686	.	TTATC	T	1320.97	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=7.662;DP=689;FS=3.462;HRun=0;HaplotypeScore=137.4124;InbreedingCoeff=0.7435;MQ=61.32;MQ0=5;MQRankSum=0.333;QD=18.87;ReadPosRankSum=0.190;VQSLOD=3.4695;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:30:0.23:0,0,41	1/1:0,8:7:18.06:299,18,0	0/0:17,0:11:18.53:0,19,384	0/0:14,0:13:11.99:0,12,206	0/0:33,0:33:81.28:0,81,1953	0/0:25,0:25:66.23:0,66,1581	0/0:7,0:7:9.03:0,9,221	0/0:46,0:46:93.30:0,93,2099	0/0:21,0:21:48.14:0,48,1064	0/0:26,0:26:60.20:0,60,1372	0/0:27,0:27:54.17:0,54,1276	0/0:30,0:30:12.03:0,12,148	0/0:22,0:22:63.22:0,63,1537	0/0:23,0:22:9.90:0,10,131	1/1:9,23:32:69.24:1141,69,0	0/0:27,0:27:72.25:0,72,1749	0/0:39,0:39:90.31:0,90,2175	0/0:19,0:18:45.15:0,45,1091	0/0:21,0:21:33.10:0,33,704	0/0:34,0:34:75.26:0,75,1720	0/0:11,0:11:24.08:0,24,590	0/0:15,0:30:9.02:0,9,116	0/0:27,0:27:18.04:0,18,242	0/0:10,0:10:6.01:0,6,92	0/0:30,0:30:69.24:0,69,1660	0/0:31,0:31:81.27:0,81,1939	0/0:39,0:39:84.29:0,84,2059	0/0:10,0:9:21.07:0,21,516
chr10	100659491	.	T	TC	17870.82	PASS	AB=0.521;AC=25;AF=0.446;AN=56;BaseQRankSum=-17.013;DP=841;FS=1.723;HRun=0;HaplotypeScore=76.4190;InbreedingCoeff=0.9289;MQ=90.63;MQ0=0;MQRankSum=-2.668;QD=44.79;ReadPosRankSum=0.826;VQSLOD=5.1317;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.29:0,87,1216	1/1:0,12:12:33.11:528,33,0	0/0:27,0:27:69.20:0,69,916	0/0:38,0:38:99:0,111,1499	1/1:0,41:41:99:1919,120,0	1/1:2,38:40:99:1582,99,0	1/1:0,31:31:90.31:1439,90,0	1/1:1,27:28:81.25:1246,81,0	0/0:35,0:35:99:0,102,1408	0/0:44,0:44:99:0,129,1805	0/0:21,0:21:60.16:0,60,788	0/0:32,0:32:96.31:0,96,1325	0/0:30,0:30:90.27:0,90,1216	0/0:34,0:34:99:0,99,1378	1/1:0,39:39:99:1630,102,0	0/1:3,34:37:17.52:1474,0,18	0/0:24,0:24:69.23:0,69,965	0/0:11,0:11:33.11:0,33,461	1/1:0,23:23:69.24:1102,69,0	1/1:0,29:29:84.29:1343,84,0	1/1:0,36:36:99:1679,105,0	0/0:17,0:17:51.17:0,51,713	0/0:31,0:31:90.27:0,90,1225	0/0:41,0:41:99:0,123,1702	0/0:26,0:26:78.25:0,78,1072	1/1:0,33:33:99:1579,99,0	1/1:0,26:26:75.26:1199,75,0	1/1:0,24:24:72.25:1151,72,0
chr10	100661561	.	AT	A	505.34	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.446;DP=511;FS=1.501;HRun=10;HaplotypeScore=59.8177;InbreedingCoeff=0.9575;MQ=74.58;MQ0=0;MQRankSum=-0.181;QD=19.44;ReadPosRankSum=1.887;VQSLOD=4.6714;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.15:0,60,656	1/1:2,6:8:17.99:156,18,0	0/0:6,0:6:12.03:0,12,132	0/0:13,0:14:18.98:0,19,199	0/0:20,1:21:19.04:0,19,421	0/0:23,1:24:46.12:0,46,722	0/0:15,0:15:39.11:0,39,431	0/0:29,0:30:52.03:0,52,778	0/0:23,0:23:60.16:0,60,662	0/0:23,0:23:63.16:0,63,685	0/0:23,1:24:34.08:0,34,582	0/0:13,0:13:36.06:0,36,385	0/0:12,0:12:30.08:0,30,332	0/0:19,0:19:54.13:0,54,590	1/1:2,16:18:53.99:469,54,0	0/0:17,0:17:51.14:0,51,564	0/0:15,0:15:36.10:0,36,398	0/0:10,0:11:26.91:0,27,280	0/0:15,0:15:39.11:0,39,431	0/0:28,0:28:75.20:0,75,830	0/0:20,0:20:48.13:0,48,531	0/0:15,0:15:39.01:0,39,404	0/0:18,0:18:54.11:0,54,585	0/0:19,0:19:48.13:0,48,531	0/0:26,0:26:72.18:0,72,782	0/0:27,0:27:66.17:0,66,724	0/0:22,1:24:42.93:0,43,665	0/0:4,0:4:12.03:0,12,133
chr10	100661621	.	CAAG	C	1295.99	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.033;DP=549;FS=3.390;HRun=0;HaplotypeScore=91.0483;InbreedingCoeff=0.9923;MQ=75.76;MQ0=0;MQRankSum=-6.411;QD=39.27;ReadPosRankSum=0.385;VQSLOD=4.4932;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.32:0,93,2012	1/1:1,11:12:33.11:522,33,0	0/0:13,0:13:30.10:0,30,589	0/0:9,0:9:21.07:0,21,433	0/0:30,0:30:84.29:0,84,1818	0/0:35,0:35:99:0,102,2226	0/0:16,0:16:45.15:0,45,983	0/0:27,0:27:69.23:0,69,1460	0/0:15,0:15:45.15:0,45,984	0/0:18,0:18:51.18:0,51,1102	0/0:23,0:23:57.20:0,57,1244	0/0:20,0:20:54.17:0,54,1140	0/0:27,0:27:78.25:0,78,1656	0/0:22,0:22:66.23:0,66,1403	1/1:0,21:21:60.12:896,60,0	0/0:19,0:19:48.16:0,48,1048	0/0:16,0:16:48.16:0,48,1050	0/0:8,0:9:24.95:0,25,479	0/0:16,0:16:48.16:0,48,1050	0/0:37,0:37:99:0,105,2277	0/0:13,0:13:36.12:0,36,786	0/0:19,0:19:54.19:0,54,1177	0/0:17,0:17:48.16:0,48,1050	0/0:12,0:12:33.11:0,33,721	0/0:18,0:18:51.18:0,51,1114	0/0:23,0:23:63.22:0,63,1364	0/0:24,0:24:66.23:0,66,1424	0/0:6,0:6:18.06:0,18,394
chr10	100662664	.	T	TA	400.10	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.859;DP=426;FS=7.999;HRun=8;HaplotypeScore=38.4702;InbreedingCoeff=0.9391;MQ=74.47;MQ0=1;MQRankSum=0.353;QD=23.54;ReadPosRankSum=1.012;VQSLOD=3.8414;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.02:0,48,439	1/1:0,10:10:27.08:312,27,0	0/0:9,0:9:23.99:0,24,210	0/0:8,0:7:11.93:0,12,98	0/0:17,0:17:45.01:0,45,407	0/0:17,0:17:42.01:0,42,384	0/0:14,0:14:39.01:0,39,357	0/0:32,0:32:72.01:0,72,653	0/0:14,0:14:39.01:0,39,352	0/0:20,0:20:54.03:0,54,494	0/0:17,0:17:45.02:0,45,412	0/0:17,0:17:36:0,36,324	0/0:12,0:12:31.52:0,32,265	0/0:21,0:21:60.02:0,60,544	1/1:1,6:7:18.05:208,18,0	0/0:12,0:12:17.99:0,18,165	0/0:25,0:25:63.02:0,63,577	0/0:13,0:13:30:0,30,269	0/0:22,0:22:60.03:0,60,549	0/0:19,0:19:54.03:0,54,494	0/0:5,0:5:9:0,9,82	0/0:7,0:7:18.01:0,18,165	0/0:12,0:12:30.01:0,30,275	0/0:12,0:12:33.01:0,33,302	0/0:15,0:15:42.02:0,42,384	0/0:18,0:18:42.01:0,42,381	0/0:22,0:23:68.04:0,68,600	0/0:10,0:10:21.01:0,21,192
chr10	100663680	.	TAG	T	2158.28	PASS	AB=0.820;AC=16;AF=0.286;AN=56;BaseQRankSum=12.303;DP=444;FS=76.153;HRun=0;HaplotypeScore=100.0812;InbreedingCoeff=-0.3990;MQ=64.90;MQ0=5;MQRankSum=-10.161;QD=7.08;ReadPosRankSum=2.194;VQSLOD=0.3072;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,2:22:11.50:0,11,1070	0/1:7,2:9:70.42:70,0,356	0/0:13,0:9:20.91:0,21,284	0/0:13,0:12:32.87:0,33,536	0/1:20,8:28:99:128,0,966	0/1:21,3:23:82.92:83,0,1026	0/0:9,0:7:21.07:0,21,422	0/0:19,0:18:54.17:0,54,1017	0/0:6,0:6:18.06:0,18,365	0/1:18,3:21:83.03:83,0,974	0/1:15,3:17:48.80:49,0,802	0/1:13,2:14:57.63:58,0,595	0/0:6,1:6:15:0,15,262	0/1:7,1:7:27.62:28,0,343	0/0:6,0:6:18.06:0,18,364	0/1:16,1:15:6.55:7,0,744	0/1:12,2:14:58.01:58,0,619	0/0:10,0:10:30.07:0,30,520	0/0:11,0:11:30.10:0,30,608	0/1:19,14:33:99:517,0,942	0/0:7,0:7:21.07:0,21,426	0/1:14,6:20:99:185,0,793	0/1:19,2:21:40.20:40,0,940	0/0:15,1:16:39.11:0,39,753	0/1:19,9:28:99:401,0,974	0/1:17,8:25:99:288,0,896	0/1:14,5:17:99:192,0,603	0/1:2,3:5:99:131,0,107
chr10	100663706	.	T	TTA	1316.94	PASS	AB=0.820;AC=15;AF=0.268;AN=56;BaseQRankSum=10.866;DP=286;FS=19.882;HRun=0;HaplotypeScore=70.7007;InbreedingCoeff=-0.4180;MQ=42.23;MQ0=5;MQRankSum=-8.368;QD=6.13;ReadPosRankSum=2.583;VQSLOD=1.5128;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,1:16:5.96:0,6,599	0/1:5,2:7:80.62:81,0,154	0/0:3,0:1:3.01:0,3,48	0/0:4,0:3:3.01:0,3,49	0/1:19,6:25:82.45:82,0,398	0/1:15,2:16:31.97:32,0,542	0/0:4,0:2:6.02:0,6,98	0/0:6,0:5:12.51:0,13,196	0/0:4,0:4:12.04:0,12,193	0/1:11,3:14:99:140,0,459	0/1:10,2:11:46.15:46,0,315	0/1:11,2:12:41.81:42,0,406	0/0:4,0:3:9.03:0,9,144	0/0:2,0:1:3.01:0,3,49	0/0:3,0:3:9.03:0,9,146	0/1:12,1:11:3.94:4,0,456	0/1:10,1:11:29.25:29,0,330	0/0:4,0:4:12.04:0,12,196	0/0:6,0:6:15.05:0,15,242	0/1:9,9:18:99:256,0,268	0/0:4,0:4:9.01:0,9,122	0/1:12,5:17:99:148,0,306	0/1:12,2:14:36.25:36,0,439	0/0:10,1:11:12.01:0,12,193	0/1:13,9:22:99:264,0,567	0/1:8,4:12:99:207,0,343	0/1:11,1:10:6.09:6,0,409	0/1:5,3:8:90.30:90,0,220
chr10	100664233	.	GATC	G	5569.96	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.665;DP=641;FS=0.408;HRun=0;HaplotypeScore=109.2415;InbreedingCoeff=0.9995;MQ=84.73;MQ0=0;MQRankSum=-0.935;QD=40.36;ReadPosRankSum=4.149;VQSLOD=6.0328;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:90.31:1533,90,0	0/0:10,0:10:30.10:0,30,691	0/0:22,0:22:48.21:0,48,1243	0/0:25,0:25:69.18:0,69,1440	0/0:23,0:21:48.15:0,48,997	0/0:17,0:17:51.17:0,51,1141	0/0:23,0:23:69.19:0,69,1540	0/0:28,0:28:78.27:0,78,1744	0/0:23,0:23:66.23:0,66,1488	0/0:21,0:21:63.22:0,63,1452	0/0:11,0:11:30.10:0,30,691	1/1:0,27:27:72.25:1227,72,0	0/0:15,0:15:45.15:0,45,1035	1/1:0,25:25:60.21:1021,60,0	0/0:33,0:33:93.31:0,93,2098	0/0:40,0:40:99:0,111,2557	0/0:35,0:35:99:0,105,2409	0/0:25,0:25:75.26:0,75,1729	0/0:26,0:26:78.25:0,78,1723	0/0:22,0:19:54.19:0,54,1244	0/0:27,0:27:75.25:0,75,1698	1/1:0,13:13:33.11:562,33,0	1/1:0,16:15:30.06:511,30,0	1/1:0,20:20:42.14:716,42,0	0/0:12,0:12:36.11:0,36,743	0/0:23,0:23:69.24:0,69,1565	0/0:30,0:30:84.29:0,84,1936	0/0:12,0:12:30.10:0,30,625
chr10	100664619	.	A	AAAAACAAAACAAAAC	29357.47	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=3.341;DP=695;FS=5.642;HRun=0;HaplotypeScore=275.9818;InbreedingCoeff=0.8571;MQ=49.16;MQ0=13;MQRankSum=-12.081;QD=60.53;ReadPosRankSum=-3.658;VQSLOD=3.4620;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:30.09:1485,30,0	0/1:5,0:5:31.99:32,0,80	0/0:27,0:11:13.59:0,14,391	0/0:28,0:10:2.86:0,3,80	1/1:25,9:32:48.15:3119,48,0	1/1:15,13:26:34:2353,34,0	1/1:31,3:32:33.10:2033,33,0	1/1:31,0:28:24.03:945,24,0	0/0:16,0:16:24.08:0,24,969	0/0:28,0:28:45.06:0,45,1458	0/0:16,0:16:45:0,45,1510	1/1:22,0:19:33.09:1470,33,0	0/0:19,0:19:45.15:0,45,1495	1/1:30,0:27:21.03:1738,21,0	1/1:15,0:15:3.48:116,3,0	1/1:15,6:20:24.08:1670,24,0	0/0:30,0:29:54.17:0,54,2120	0/0:27,0:28:48.16:0,48,1609	1/1:33,6:38:56.17:2291,56,0	1/1:27,3:26:36.12:2091,36,0	1/1:11,2:13:18.95:950,19,0	1/1:27,0:27:33.99:2014,34,0	1/1:42,0:41:42.13:2280,42,0	1/1:24,0:24:18.06:975,18,0	0/0:18,0:18:33.10:0,33,1272	1/1:10,6:17:33.08:1358,33,0	1/1:22,0:22:27.09:1579,27,0	1/1:8,2:11:12.82:858,13,0
chr10	100664639	.	C	CAAAAAAAAAAAAA	12663.62	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=15.441;DP=653;FS=2.189;HRun=4;HaplotypeScore=262.5811;InbreedingCoeff=-0.4071;MQ=51.79;MQ0=3;MQRankSum=-11.937;QD=29.31;ReadPosRankSum=7.001;VQSLOD=0.4774;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:29:99:719,0,513	0/1:3,0:3:96.06:145,0,96	0/0:20,0:15:33.81:0,34,803	0/0:17,0:8:10.56:0,11,301	0/1:37,0:33:99:1497,0,733	0/1:26,0:22:99:1625,0,312	0/1:31,0:28:99:649,0,868	0/0:31,0:28:3.46:0,3,940	0/0:15,0:15:39.03:0,39,1039	0/0:27,0:27:75.06:0,75,1954	0/0:19,0:19:53.47:0,53,1466	0/1:21,0:18:99:146,0,670	0/0:20,0:20:57.13:0,57,1522	0/1:25,0:22:99:852,0,686	1/1:3,10:20:3.48:197,3,0	0/1:20,0:18:99:1319,0,213	0/0:28,0:27:64.42:0,64,2163	0/0:24,0:25:66.13:0,66,1788	0/1:33,0:33:99:795,0,788	0/1:29,0:26:99:827,0,834	0/1:13,0:13:99:277,0,328	0/1:29,0:29:99:504,0,1045	0/1:38,0:38:99:1114,0,1013	0/1:21,0:20:99:459,0,361	0/0:19,0:19:57.14:0,57,1610	0/1:15,0:14:99:377,0,342	0/1:30,0:28:99:635,0,906	0/1:10,0:10:99:525,0,158
chr10	100664790	.	C	CTT	3233.06	PASS	AB=0.781;AC=18;AF=0.321;AN=56;BaseQRankSum=-2.478;DP=519;FS=1.351;HRun=10;HaplotypeScore=68.4952;InbreedingCoeff=0.8585;MQ=78.24;MQ0=0;MQRankSum=-1.169;QD=19.96;ReadPosRankSum=0.060;VQSLOD=2.6661;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,21:25:63.16:898,63,0	0/1:2,0:9:9.93:41,0,10	0/0:19,0:19:18.78:0,19,232	0/1:8,0:8:4.12:4,0,134	0/0:21,0:24:56.81:0,57,554	0/0:20,0:21:41.56:0,42,461	0/0:18,0:18:42.05:0,42,426	0/0:32,0:32:72.03:0,72,715	1/1:2,0:18:34.93:123,35,0	0/0:20,0:21:44.82:0,45,510	0/0:22,0:22:45.01:0,45,457	1/1:4,10:14:21.07:313,21,0	0/0:21,0:23:56.56:0,57,542	1/1:2,11:13:24:307,24,0	1/1:4,0:12:12.48:44,12,0	0/0:16,0:18:32.51:0,33,369	0/0:26,0:28:74.58:0,75,716	0/0:22,0:23:53.80:0,54,531	0/0:10,0:10:23.95:0,24,224	0/0:17,0:17:26.97:0,27,269	0/0:16,0:16:39.05:0,39,397	1/1:4,15:22:50.53:640,51,0	1/1:5,20:25:39.13:581,39,0	1/1:2,13:15:33.11:492,33,0	0/0:22,0:22:60.12:0,60,610	0/0:14,0:16:44.57:0,45,415	0/0:14,0:14:30.06:0,30,305	0/0:11,0:11:30.06:0,30,305
chr10	100665484	.	CTTT	C	12760.11	PASS	AB=0.559;AC=37;AF=0.661;AN=56;BaseQRankSum=12.396;DP=559;FS=5.619;HRun=10;HaplotypeScore=90.1774;InbreedingCoeff=0.8517;MQ=64.20;MQ0=1;MQRankSum=-0.627;QD=32.47;ReadPosRankSum=2.236;VQSLOD=4.3159;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:51.16:695,51,0	1/1:1,11:12:27.08:368,27,0	0/0:11,0:9:3.57:0,4,170	0/0:4,0:3:6.02:0,6,100	1/1:1,35:36:90.27:1228,90,0	1/1:0,18:18:48.16:655,48,0	1/1:2,5:7:12.03:164,12,0	1/1:7,32:39:96.21:1225,96,0	0/0:10,0:10:30.07:0,30,546	0/0:26,0:26:69.24:0,69,1426	0/0:23,0:24:60.15:0,60,1183	1/1:0,18:18:47.95:655,48,0	0/0:26,0:27:78.25:0,78,1565	1/1:4,14:18:36.10:491,36,0	1/1:2,25:27:75.24:1023,75,0	1/1:4,23:27:4.45:684,4,0	0/0:23,0:24:72.23:0,72,1438	0/0:24,0:25:66.16:0,66,1242	1/1:3,17:20:51.16:695,51,0	1/1:0,37:37:99:1391,102,0	1/1:1,10:11:27.08:368,27,0	1/1:1,9:10:18.04:246,18,0	1/1:0,18:18:41.91:573,42,0	1/1:1,8:9:24.08:320,24,0	0/0:15,0:15:39.13:0,39,809	0/1:4,15:19:73.35:546,0,73	1/1:4,26:30:69.01:941,69,0	1/1:2,12:14:36.11:491,36,0
chr10	100667160	.	CT	C	17819.58	PASS	AB=0.525;AC=33;AF=0.589;AN=56;BaseQRankSum=16.803;DP=748;FS=0.559;HRun=2;HaplotypeScore=89.1149;InbreedingCoeff=0.9261;MQ=86.27;MQ0=0;MQRankSum=-4.535;QD=38.65;ReadPosRankSum=2.127;VQSLOD=5.2885;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,48:48:99:1844,132,0	0/0:8,0:8:24.08:0,24,384	0/0:25,0:25:75.25:0,75,1179	0/0:27,0:27:81.27:0,81,1262	1/1:0,40:40:99:1421,105,0	1/1:0,14:14:42.14:581,42,0	1/1:0,26:26:75.25:1048,75,0	1/1:0,36:36:99:1401,102,0	0/0:27,0:27:81.23:0,81,1216	0/0:28,0:28:84.29:0,84,1332	0/0:21,0:21:63.20:0,63,981	1/1:0,24:24:69.23:964,69,0	0/0:36,0:36:99:0,108,1692	1/1:0,23:23:66.22:921,66,0	0/0:34,0:34:99:0,102,1626	1/1:0,20:20:54.18:755,54,0	0/0:29,0:29:84.29:0,84,1343	0/0:20,0:20:60.16:0,60,931	1/1:0,16:16:48.09:646,48,0	1/1:0,32:32:93.31:1288,93,0	1/1:0,25:25:69.23:963,69,0	1/1:0,32:32:87.29:1210,87,0	1/1:0,24:24:66.22:922,66,0	1/1:0,17:17:45.15:629,45,0	0/0:32,0:32:96.33:0,96,1528	0/1:3,29:32:26.58:1092,0,27	1/1:0,32:32:93.31:1297,93,0	1/1:0,20:20:60.20:838,60,0
chr10	100669260	.	A	AT	5699.68	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-8.408;DP=524;FS=9.267;HRun=9;HaplotypeScore=72.5982;InbreedingCoeff=0.9587;MQ=71.32;MQ0=0;MQRankSum=0.673;QD=25.22;ReadPosRankSum=-1.255;VQSLOD=4.7784;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:20:34.63:0,35,102	0/0:1,0:12:20.37:0,20,60	0/0:14,0:14:16.69:0,17,177	0/0:13,0:12:1.45:0,1,126	1/1:6,26:33:51.87:744,52,0	1/1:2,23:24:63.17:697,63,0	1/1:3,9:12:27.07:299,27,0	1/1:9,24:35:59:785,59,0	0/0:23,0:23:62.97:0,63,543	0/0:20,0:20:53.98:0,54,466	0/0:26,0:26:62.98:0,63,547	0/0:0,0:20:38.70:0,39,114	0/0:11,0:12:32.03:0,32,266	0/0:0,0:10:14.26:0,14,42	0/0:0,0:10:16.30:0,16,48	1/1:2,9:11:27.07:299,27,0	0/0:25,0:25:68.95:0,69,594	0/0:20,0:20:44.96:0,45,386	1/1:4,13:18:44.90:448,45,0	1/1:5,19:24:52.53:531,53,0	1/1:0,6:6:18.05:199,18,0	0/0:2,0:16:24.44:0,24,72	0/0:4,0:12:16.29:0,16,48	0/0:2,0:18:32.59:0,33,96	0/0:27,0:27:71.97:0,72,625	1/1:4,17:21:28.09:538,28,0	1/1:5,22:27:66.18:728,66,0	1/1:0,14:14:39.11:431,39,0
chr10	100670688	.	GTC	G	3203.17	PASS	AB=0.714;AC=34;AF=0.607;AN=56;BaseQRankSum=6.356;DP=541;FS=3.082;HRun=0;HaplotypeScore=137.2037;InbreedingCoeff=0.5672;MQ=54.55;MQ0=5;MQRankSum=-4.239;QD=9.65;ReadPosRankSum=0.105;VQSLOD=3.6160;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,8:19:10.69:155,11,0	1/1:2,4:4:9.03:120,9,0	0/0:40,1:17:23.43:0,23,341	0/0:40,0:22:28.08:0,28,394	1/1:18,15:32:21.04:310,21,0	1/1:14,11:25:6.02:78,6,0	1/1:7,10:17:12.04:156,12,0	0/1:19,10:27:69.40:413,0,69	0/0:19,1:20:14.24:0,14,796	0/0:20,0:20:48.15:0,48,772	0/0:22,0:22:51.16:0,51,843	1/1:8,5:13:16.64:207,17,0	0/0:11,0:11:22.84:0,23,312	1/1:3,12:15:9.42:98,9,0	1/1:9,11:20:3.01:40,3,0	1/1:7,14:21:1.46:132,1,0	0/0:23,0:23:49.40:0,49,798	0/0:17,0:17:32.95:0,33,709	0/1:12,5:17:13.59:230,0,14	1/1:8,14:21:18.06:230,18,0	1/1:3,8:11:6.02:80,6,0	1/1:5,6:11:15.04:184,15,0	1/1:3,11:13:12.03:145,12,0	0/1:4,5:8:19.10:19,0,19	0/0:15,0:15:33.11:0,33,565	0/1:11,6:18:15.28:442,0,15	1/1:15,7:23:25.22:327,25,0	1/1:0,1:1:3.01:40,3,0
chr10	100670690	.	C	CTCTCTG	4223.41	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=6.515;DP=560;FS=7.373;HRun=0;HaplotypeScore=174.7859;InbreedingCoeff=0.6470;MQ=53.60;MQ0=7;MQRankSum=-4.389;QD=12.50;ReadPosRankSum=-1.721;VQSLOD=3.3000;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:10.85:123,11,0	1/1:6,0:4:8.91:70,9,0	0/0:43,0:18:26:0,26,427	0/0:45,0:21:32.38:0,32,440	1/1:35,0:33:20.93:441,21,0	1/1:17,8:24:6.49:117,6,0	1/1:18,0:17:11.91:194,12,0	1/1:29,0:27:6.07:590,6,0	0/0:21,0:21:14.24:0,14,1037	0/0:21,0:21:51.15:0,51,952	0/0:22,0:22:51.16:0,51,998	1/1:15,0:15:12.87:166,13,0	0/0:13,0:13:25.84:0,26,371	1/1:15,0:15:11.70:109,12,0	1/1:18,0:18:2.04:6,2,0	1/1:23,0:21:15.01:235,15,0	0/0:23,0:23:51:0,51,1013	0/0:17,0:17:39.81:0,40,906	0/1:18,0:17:4.96:315,0,5	1/1:24,0:21:18.06:306,18,0	1/1:11,0:11:6.02:80,6,0	1/1:13,0:13:14.66:144,15,0	1/1:14,0:13:3.50:58,3,0	0/1:11,0:10:19.17:19,0,19	0/0:17,0:17:33.11:0,33,685	0/1:20,0:20:24.79:647,0,25	1/1:23,0:23:29.83:550,30,0	1/1:1,0:1:3.01:54,3,0
chr10	100670692	.	C	CTCTG	1333.11	PASS	AB=0.995;AC=26;AF=0.464;AN=56;BaseQRankSum=6.328;DP=572;FS=0.511;HRun=0;HaplotypeScore=177.7523;InbreedingCoeff=0.3144;MQ=53.12;MQ0=8;MQRankSum=-4.812;QD=4.19;ReadPosRankSum=-1.927;VQSLOD=2.1629;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:19:4.41:68,4,0	1/1:5,0:3:8.21:56,8,0	0/0:45,0:17:27.11:0,27,408	0/0:49,0:22:26.17:0,26,406	1/1:38,0:36:13.16:120,13,0	1/1:22,2:23:3.44:11,3,0	0/1:19,0:18:1.13:39,0,1	0/1:32,0:30:30.06:305,0,30	0/0:20,0:20:56.53:0,57,951	0/0:22,0:22:54.15:0,54,892	0/0:21,0:21:51.16:0,51,911	0/1:15,0:15:16.11:46,0,16	0/0:12,0:12:28.83:0,29,380	1/1:15,0:15:1.74:72,2,0	0/0:17,0:17:2.37:0,2,8	0/1:21,1:20:8.16:9,0,8	0/0:23,0:23:50.63:0,51,865	0/0:16,0:17:27.02:0,27,767	0/1:21,0:20:39.06:128,0,39	1/1:26,0:23:14.46:122,14,0	0/0:9,0:9:4.74:0,5,16	1/1:13,0:13:4.40:94,4,0	0/1:14,0:13:6.35:40,0,6	0/1:11,0:10:18.88:19,0,19	0/0:18,0:18:39.07:0,39,654	0/1:22,0:22:51.26:202,0,51	1/1:20,1:21:17.36:177,17,0	1/1:1,0:1:0.47:1,0,0
chr10	100670706	.	G	GTC	2027	PASS	AB=0.974;AC=24;AF=0.444;AN=54;BaseQRankSum=9.755;DP=615;FS=33.099;HRun=0;HaplotypeScore=170.7698;InbreedingCoeff=0.6890;MQ=40.08;MQ0=25;MQRankSum=-7.831;QD=6.80;ReadPosRankSum=-2.935;VQSLOD=1.2994;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,1:18:13.80:46,0,14	0/0:6,0:4:3.63:0,4,11	0/0:51,0:7:12.51:0,13,250	0/0:63,0:20:12.77:0,13,224	1/1:42,0:40:14.69:186,15,0	1/1:26,0:24:6.44:47,6,0	1/1:15,0:16:8.63:57,9,0	1/1:33,0:31:62.01:560,62,0	0/0:21,0:21:48.14:0,48,668	0/0:21,0:21:57.18:0,57,800	0/0:19,0:19:33.11:0,33,471	0/0:13,0:13:0.53:0,1,17	0/0:14,0:13:23.71:0,24,333	1/1:15,0:15:5.88:52,6,0	0/0:14,1:15:2.97:0,3,20	1/1:25,0:23:11.99:109,12,0	0/0:24,0:24:46.98:0,47,704	0/0:15,0:15:38.49:0,38,519	1/1:23,1:22:40.91:324,41,0	1/1:29,0:26:8.20:55,8,0	./.	0/0:13,0:13:2.55:0,3,20	0/0:15,0:14:6.44:0,6,47	0/1:12,0:11:0:0,0,0	0/0:20,0:20:35.71:0,36,472	1/1:26,0:26:5.97:394,6,0	1/1:26,1:26:34.63:342,35,0	1/1:3,0:3:5.96:43,6,0
chr10	100670708	.	CTATG	C	4379.50	PASS	AB=0.784;AC=28;AF=0.500;AN=56;BaseQRankSum=9.628;DP=610;FS=42.874;HRun=0;HaplotypeScore=169.2733;InbreedingCoeff=0.5807;MQ=39.52;MQ0=29;MQRankSum=-8.342;QD=13.69;ReadPosRankSum=-2.417;VQSLOD=2.4278;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,1:18:8.29:27,0,8	1/1:6,0:4:1.33:46,1,0	0/0:54,0:7:13.12:0,13,391	0/0:64,0:19:16.26:0,16,381	1/1:17,23:38:8.99:180,9,0	1/1:12,13:23:6.49:119,6,0	1/1:5,11:16:9.03:170,9,0	1/1:20,14:31:77.52:1138,78,0	0/0:21,0:21:51.17:0,51,1241	0/0:22,0:21:57.19:0,57,1451	0/0:18,0:18:36.12:0,36,832	0/1:11,1:13:7.39:12,0,7	0/0:14,0:13:30.07:0,30,650	1/1:14,0:15:5.79:59,6,0	1/1:13,1:14:1.82:5,2,0	1/1:6,17:21:6.86:161,7,0	0/0:24,0:24:46.87:0,47,1272	0/0:14,0:14:39.13:0,39,936	1/1:9,15:21:54.26:835,54,0	1/1:17,13:26:8.43:116,8,0	0/1:4,2:6:0:0,0,0	0/0:12,0:13:2.37:0,2,16	0/0:13,1:13:5.36:0,5,36	0/0:10,1:11:0.22:0,0,1	0/0:19,0:19:36.12:0,36,919	0/1:10,15:26:23.42:817,0,23	1/1:17,10:26:40.47:594,40,0	1/1:2,1:3:6.02:100,6,0
chr10	100670712	.	G	GTC	1433.24	PASS	AB=0.907;AC=22;AF=0.407;AN=54;BaseQRankSum=6.306;DP=623;FS=25.574;HRun=0;HaplotypeScore=182.2272;InbreedingCoeff=0.4272;MQ=39.16;MQ0=30;MQRankSum=-5.700;QD=5.53;ReadPosRankSum=-4.876;VQSLOD=0.6327;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:4.83:38,5,0	1/1:6,0:4:8.30:41,8,0	0/0:53,0:7:9.57:0,10,189	0/0:62,1:17:18.31:0,18,230	0/0:30,8:36:0.41:0,0,2	0/0:20,6:24:4.74:0,5,15	0/1:16,1:17:5.25:33,0,5	1/1:35,7:40:33.62:589,34,0	0/0:22,0:22:42.14:0,42,563	0/0:23,0:21:50.20:0,50,665	0/0:15,0:15:24.08:0,24,329	1/1:13,0:13:4.49:26,4,0	0/0:15,0:14:32.86:0,33,375	1/1:17,0:17:6.02:67,6,0	0/0:13,0:14:0.89:0,1,2	0/1:19,5:22:11.55:43,0,12	0/0:25,0:25:45.14:0,45,611	0/0:14,0:14:36.07:0,36,444	1/1:22,0:19:16.59:253,17,0	0/0:26,6:28:1.73:0,2,6	./.	1/1:13,0:13:2.92:18,3,0	1/1:13,0:13:2.85:16,3,0	0/1:12,0:12:0:0,0,0	0/0:19,0:19:33.11:0,33,452	0/1:22,4:26:47.09:347,0,47	0/1:24,4:27:26.08:116,0,26	0/1:3,0:3:2.68:13,0,3
chr10	100670716	.	CTG	C	625.38	PASS	AB=0.923;AC=23;AF=0.411;AN=56;BaseQRankSum=5.169;DP=641;FS=12.388;HRun=0;HaplotypeScore=181.6448;InbreedingCoeff=0.0844;MQ=38.76;MQ0=32;MQRankSum=-3.485;QD=1.73;ReadPosRankSum=-1.466;VQSLOD=1.1413;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,7:22:13.52:17,0,14	1/1:2,4:5:3.71:127,4,0	0/0:49,0:6:14.10:0,14,202	0/0:63,0:17:9.65:0,10,238	0/0:38,0:37:5.53:0,6,27	0/1:28,1:27:10.54:11,0,15	0/1:17,0:17:3.86:4,0,15	0/1:48,2:48:99:105,0,424	0/0:19,0:19:29.13:0,29,729	0/0:22,0:20:60.10:0,60,1011	0/0:15,0:15:27.03:0,27,439	1/1:7,8:15:1.99:41,2,0	0/0:15,0:14:33.04:0,33,502	0/1:9,11:20:26.08:46,0,26	1/1:6,7:14:3.01:44,3,0	0/1:24,0:22:13.14:13,0,21	0/0:26,1:27:53.50:0,54,858	0/0:14,0:14:39.01:0,39,602	0/1:22,0:19:29.76:118,0,30	0/1:34,1:31:0.11:20,0,0	0/1:5,0:4:0:0,0,0	1/1:6,9:15:0.20:40,0,0	1/1:5,10:14:6:69,6,0	0/1:8,5:12:0.24:0,0,1	0/0:17,0:17:33.11:0,33,629	0/1:26,0:26:43.68:44,0,179	0/1:27,1:27:42.75:65,0,43	0/1:3,0:3:0.60:15,0,1
chr10	100670720	.	CTCTG	C	331.62	PASS	AB=0.970;AC=18;AF=0.321;AN=56;BaseQRankSum=5.859;DP=651;FS=8.294;HRun=0;HaplotypeScore=191.9959;InbreedingCoeff=0.2332;MQ=38.56;MQ0=31;MQRankSum=-3.040;QD=1.24;ReadPosRankSum=-0.202;VQSLOD=1.3247;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:2.68:0,3,11	0/1:7,0:5:0.46:17,0,0	0/0:48,0:5:2.80:0,3,13	0/0:63,0:17:5.15:0,5,81	0/0:37,1:36:2.69:0,3,24	1/1:30,0:28:7.64:38,8,0	1/1:17,1:18:11.29:83,11,0	0/0:54,0:52:67.85:0,68,421	0/0:19,0:19:44.33:0,44,452	0/0:21,0:19:50.75:0,51,646	0/0:16,0:16:20.10:0,20,281	0/0:16,0:16:6.76:0,7,29	0/0:15,0:14:33.06:0,33,542	0/0:18,0:18:11.06:0,11,56	0/1:14,1:15:0.62:39,0,1	0/1:24,0:22:5.24:29,0,5	0/0:28,0:28:53.46:0,53,680	0/1:14,0:14:8.10:8,0,338	0/1:23,0:21:59.44:59,0,65	0/1:41,0:37:40.93:41,0,156	0/0:6,0:5:0:0,0,0	0/1:16,0:16:4.54:5,0,13	1/1:14,0:13:2.60:10,3,0	0/1:13,0:12:0.25:0,0,1	0/0:17,0:17:32.95:0,33,426	0/1:24,0:24:37.15:37,0,46	0/1:18,8:25:2.87:88,0,3	1/1:3,0:3:5.35:30,5,0
chr10	100670724	.	GTC	G	219.73	PASS	AB=0.930;AC=13;AF=0.271;AN=48;BaseQRankSum=2.996;DP=681;FS=0.000;HRun=0;HaplotypeScore=181.8227;InbreedingCoeff=0.2331;MQ=38.78;MQ0=35;MQRankSum=1.268;QD=1.17;ReadPosRankSum=1.135;VQSLOD=2.6606;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:8,0:6:6:0,6,52	./.	./.	0/0:41,0:39:7.25:0,7,70	0/1:30,0:27:0:0,0,0	0/0:20,0:20:3.88:0,4,26	0/0:58,0:56:7.95:0,8,34	0/1:19,1:20:38.55:39,0,135	0/0:23,0:21:15.52:0,16,212	0/1:18,1:19:20.24:20,0,167	1/1:12,3:15:7.93:87,8,0	0/1:12,4:15:34.64:35,0,315	1/1:12,6:18:11.77:99,12,0	0/0:16,0:16:4.35:0,4,26	0/0:24,0:22:2.99:0,3,23	0/1:23,4:27:37.71:38,0,283	0/0:12,0:17:14.23:0,14,162	0/0:30,0:27:14.13:0,14,96	0/0:46,0:42:16.31:0,16,218	./.	1/1:14,2:16:3.01:32,3,0	0/1:13,0:12:0:0,0,0	0/1:13,1:13:0.24:0,0,1	0/0:18,0:18:9.03:0,9,133	0/0:24,0:24:13.59:0,14,85	0/0:29,0:27:2.42:0,2,81	0/0:6,0:4:2.04:0,2,6
chr10	100670728	.	C	CTGTG	460.04	PASS	AB=0.843;AC=11;AF=0.204;AN=54;BaseQRankSum=3.316;DP=695;FS=0.000;HRun=0;HaplotypeScore=203.7495;InbreedingCoeff=0.5590;MQ=39.33;MQ0=37;MQRankSum=-0.763;QD=4.95;ReadPosRankSum=-0.482;VQSLOD=2.0073;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:26:2.99:0,3,23	0/1:7,0:5:58.93:59,0,96	./.	0/0:57,0:15:2.86:0,3,174	0/0:43,0:41:14.93:0,15,182	0/0:29,0:26:7.34:0,7,56	0/0:21,0:21:15.46:0,15,139	0/0:59,0:58:97.85:0,98,687	0/0:20,0:20:51.04:0,51,738	0/0:26,0:24:60.57:0,61,876	0/0:19,0:19:35.85:0,36,538	1/1:12,3:16:11.71:178,12,0	0/0:16,0:15:33.11:0,33,600	1/1:13,3:17:12.02:240,12,0	0/0:17,0:17:11.99:0,12,120	0/0:24,0:22:10.32:0,10,88	0/0:27,0:27:46.02:0,46,865	0/0:16,0:16:33.56:0,34,499	0/0:32,0:28:57.98:0,58,408	0/0:47,0:43:32.41:0,32,468	1/1:7,0:6:0.12:0,0,0	1/1:9,4:16:5.76:91,6,0	0/1:10,3:14:4.73:29,0,5	0/1:10,3:13:0.05:1,0,0	0/0:21,0:21:39.09:0,39,586	0/0:26,0:26:52.80:0,53,502	0/0:29,0:27:32.46:0,32,299	0/0:6,0:4:8.98:0,9,83
chr10	100671471	.	C	CAAACAAACAA	14628.86	PASS	AB=0.531;AC=21;AF=0.375;AN=56;BaseQRankSum=-10.273;DP=624;FS=0.371;HRun=0;HaplotypeScore=180.5150;InbreedingCoeff=0.9048;MQ=67.13;MQ0=5;MQRankSum=-11.801;QD=58.05;ReadPosRankSum=-2.221;VQSLOD=4.3207;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:37.21:0,37,970	0/0:6,0:6:15.63:0,16,287	0/0:18,0:16:21.05:0,21,319	0/0:24,0:22:49.02:0,49,978	1/1:3,12:18:15.87:449,16,0	1/1:4,24:28:42.14:2163,42,0	1/1:2,11:13:12.04:618,12,0	1/1:26,0:33:75.20:1150,75,0	0/0:19,0:19:48.15:0,48,1281	0/0:32,0:32:87.28:0,87,2261	0/0:20,0:20:54.15:0,54,1372	0/0:24,0:24:55.43:0,55,1259	0/0:34,0:34:90.26:0,90,2304	0/0:26,0:25:55.74:0,56,1260	0/0:30,0:30:78.26:0,78,1669	1/1:2,26:29:32.39:1551,32,0	0/0:26,0:26:72.23:0,72,1834	0/0:14,0:14:30.07:0,30,847	1/1:3,13:17:47.18:1565,47,0	1/1:4,27:34:54.06:2171,54,0	1/1:10,0:10:17.92:240,18,0	0/0:22,0:22:53.97:0,54,1193	0/0:15,0:15:33.11:0,33,726	0/0:18,0:18:33.11:0,33,726	0/0:23,0:23:54.17:0,54,1426	0/1:3,21:26:25.47:2560,0,25	1/1:3,25:31:34.06:1698,34,0	1/1:2,9:11:9.03:464,9,0
chr10	100671473	.	AAC	A	5832.73	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=0.895;DP=614;FS=2.155;HRun=0;HaplotypeScore=122.7930;InbreedingCoeff=0.9915;MQ=70.59;MQ0=5;MQRankSum=3.632;QD=36.23;ReadPosRankSum=5.999;VQSLOD=6.6942;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:19:35.99:694,36,0	1/1:0,6:6:18.06:275,18,0	0/0:19,0:17:41.91:0,42,564	0/0:26,0:24:58.39:0,58,933	0/0:16,0:16:20.19:0,20,211	0/0:28,0:27:51.08:0,51,513	0/0:12,0:12:15.03:0,15,167	0/0:35,0:34:89.32:0,89,1034	0/0:17,0:17:51.17:0,51,940	0/0:33,0:33:99:0,99,1776	0/0:19,0:19:54.18:0,54,1008	1/1:0,23:23:57.19:872,57,0	0/0:34,0:34:99:0,99,1763	1/1:0,25:24:57.19:873,57,0	1/1:0,30:30:78.26:1194,78,0	0/0:27,0:27:36.08:0,36,380	0/0:26,0:26:72.24:0,72,1291	0/0:14,0:14:42.14:0,42,747	0/0:16,0:16:41.73:0,42,389	0/0:33,0:33:57.94:0,58,614	0/0:9,0:9:20.90:0,21,183	1/1:0,23:23:60.16:892,60,0	1/1:0,17:17:33.11:505,33,0	1/1:0,17:17:36.10:527,36,0	0/0:23,0:23:69.22:0,69,1231	0/0:27,0:27:66.32:0,66,770	0/0:28,0:28:44.83:0,45,456	0/0:11,0:11:14.77:0,15,166
chr10	100671667	.	TA	T	11917.77	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=16.478;DP=687;FS=14.711;HRun=7;HaplotypeScore=106.0565;InbreedingCoeff=0.9995;MQ=77.65;MQ0=0;MQRankSum=-2.511;QD=25.25;ReadPosRankSum=2.354;VQSLOD=3.6250;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:63.14:643,63,0	1/1:1,11:12:30.06:306,30,0	0/0:18,0:18:42.13:0,42,511	0/0:11,0:11:25.53:0,26,252	1/1:4,28:32:75.17:765,75,0	1/1:1,25:26:60.14:612,60,0	1/1:1,25:26:66.15:673,66,0	1/1:5,22:27:63.12:636,63,0	0/0:24,0:24:72.23:0,72,906	0/0:31,0:30:90.29:0,90,1132	0/0:26,0:26:63.20:0,63,793	1/1:1,23:24:63.14:643,63,0	0/0:22,1:23:35.60:0,36,761	1/1:1,32:33:93.21:949,93,0	1/1:4,27:31:75.17:765,75,0	1/1:3,22:25:57.13:581,57,0	0/0:26,0:26:72.23:0,72,906	0/0:24,0:24:66.21:0,66,828	1/1:6,13:19:45.09:454,45,0	1/1:2,29:31:87.20:888,87,0	1/1:2,17:19:48.11:490,48,0	1/1:1,24:25:60.13:612,60,0	1/1:1,25:26:72.16:734,72,0	1/1:2,19:21:48.11:490,48,0	0/0:32,0:32:78.24:0,78,968	1/1:4,21:25:28.40:605,28,0	1/1:4,23:27:63.14:643,63,0	1/1:0,19:19:42.10:429,42,0
chr10	100672790	.	G	GAAAAAAAGAAAAA	19983.96	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=10.099;DP=498;FS=1.965;HRun=0;HaplotypeScore=191.7441;InbreedingCoeff=0.9017;MQ=48.36;MQ0=5;MQRankSum=-12.361;QD=59.83;ReadPosRankSum=-6.377;VQSLOD=3.5739;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:30:34.20:1942,34,0	1/1:6,0:6:12.04:432,12,0	0/0:10,0:6:15.01:0,15,378	0/0:6,0:4:8.98:0,9,206	1/1:13,2:18:24:1033,24,0	1/1:11,2:20:24.02:992,24,0	1/1:17,0:15:39.04:1803,39,0	1/1:33,0:28:47.29:1551,47,0	0/0:15,0:15:32.91:0,33,969	0/0:14,0:16:33.11:0,33,1057	0/0:20,0:20:38.87:0,39,1002	1/1:16,1:20:54.13:2348,54,0	0/0:20,0:20:38.58:0,39,1108	1/1:6,0:13:18.05:911,18,0	1/1:7,0:18:27.08:859,27,0	1/1:12,0:23:27.05:1472,27,0	0/0:31,0:36:91.79:0,92,3163	0/0:19,0:22:54:0,54,1718	1/1:11,0:11:17.99:685,18,0	1/1:20,0:20:36.03:1262,36,0	1/1:8,0:7:9.83:173,10,0	1/1:8,0:15:15.04:549,15,0	1/1:13,0:12:0.15:627,0,0	1/1:9,0:12:14.52:574,15,0	0/0:14,0:16:39.13:0,39,1293	1/1:20,1:26:50.60:1389,51,0	1/1:14,0:14:27.02:1198,27,0	1/1:0,1:5:3.01:185,3,0
chr10	100673345	.	ATT	A	2221.20	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.311;DP=449;FS=4.456;HRun=10;HaplotypeScore=82.6329;InbreedingCoeff=0.9733;MQ=73.75;MQ0=0;MQRankSum=-2.715;QD=25.83;ReadPosRankSum=1.930;VQSLOD=3.8170;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:21:48.08:515,48,0	0/0:0,0:9:22.46:0,22,77	0/0:12,0:12:18.06:0,18,265	0/0:7,0:6:8.92:0,9,66	0/0:18,0:18:48.15:0,48,736	0/0:16,0:16:45.14:0,45,690	0/0:12,0:12:27.08:0,27,405	0/0:31,0:33:90.29:0,90,1368	0/0:12,0:12:33.11:0,33,523	0/0:20,0:20:51.17:0,51,783	0/0:13,0:13:36.12:0,36,571	1/1:3,16:19:51.12:563,51,0	0/0:20,0:21:59.55:0,60,890	1/1:0,17:17:51.14:568,51,0	0/0:1,0:14:32.44:0,32,111	0/0:17,0:17:36.12:0,36,571	0/0:25,0:25:69.21:0,69,1030	0/0:15,0:15:42.14:0,42,665	0/0:18,0:18:43.12:0,43,666	0/0:24,0:24:66.22:0,66,1036	0/0:8,0:8:21.07:0,21,325	1/1:5,12:17:42.08:458,42,0	1/1:1,5:6:12.02:134,12,0	1/1:1,5:6:15.04:167,15,0	0/0:15,0:15:42.12:0,42,639	0/0:16,0:17:42.13:0,42,638	0/0:30,0:31:66.03:0,66,1155	0/0:5,0:6:17.49:0,17,217
chr10	100673401	.	T	TA	13198.76	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=13.737;DP=436;FS=1.246;HRun=0;HaplotypeScore=66.6053;InbreedingCoeff=0.9650;MQ=73.90;MQ0=0;MQRankSum=-3.371;QD=43.13;ReadPosRankSum=-2.575;VQSLOD=4.3334;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:63.13:974,63,0	1/1:0,6:6:18.06:275,18,0	0/0:10,0:10:4.70:0,5,281	0/0:7,0:7:18.06:0,18,241	1/1:1,21:22:51.10:772,51,0	1/1:0,18:18:48.16:766,48,0	1/1:3,16:19:45.15:719,45,0	1/1:0,28:28:84.26:1297,84,0	0/0:14,0:14:42.12:0,42,556	0/0:9,0:9:27.09:0,27,378	0/0:8,0:8:24.07:0,24,321	1/1:2,19:21:57.11:855,57,0	0/0:16,0:16:48.14:0,48,653	1/1:1,14:15:45.14:693,45,0	1/1:0,20:20:60:866,60,0	1/1:0,11:11:30.10:469,30,0	0/0:35,0:35:99:0,105,1467	0/0:18,0:18:54.13:0,54,716	1/1:1,17:18:41.01:734,41,0	1/1:0,24:24:72.25:1150,72,0	1/1:0,6:6:18.06:287,18,0	1/1:1,9:10:30.09:454,30,0	1/1:0,12:12:36.04:544,36,0	1/1:1,7:8:21.07:329,21,0	0/0:13,0:13:39.13:0,39,545	1/1:1,19:20:57.17:886,57,0	1/1:2,20:23:66.11:985,66,0	1/1:0,4:4:9.03:143,9,0
chr10	100673589	.	ATATATATG	A	4348.63	PASS	AB=1.000;AC=29;AF=0.537;AN=54;BaseQRankSum=6.351;DP=254;FS=33.842;HRun=0;HaplotypeScore=126.7583;InbreedingCoeff=0.3489;MQ=57.75;MQ0=2;MQRankSum=-6.025;QD=24.57;ReadPosRankSum=3.723;VQSLOD=2.4399;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:80.42:80,0,191	0/1:8,0:8:13.23:208,0,13	./.	0/0:18,0:5:10.14:0,10,55	1/1:7,4:11:17.92:236,18,0	1/1:7,3:10:23.85:329,24,0	1/1:8,0:8:14.85:132,15,0	1/1:14,0:14:21.05:261,21,0	0/0:7,0:7:15.05:0,15,304	0/0:2,0:2:3.01:0,3,65	0/0:6,0:6:15.05:0,15,263	0/1:12,0:12:38.23:287,0,38	0/0:2,0:2:3.01:0,3,130	0/1:8,0:8:58.01:105,0,58	0/1:18,0:18:99:184,0,291	1/1:5,1:6:11.93:165,12,0	0/0:21,0:21:60.14:0,60,1377	0/0:6,0:6:15.05:0,15,349	1/1:12,0:13:27.09:491,27,0	1/1:3,3:6:15.05:289,15,0	1/1:3,0:3:5.91:38,6,0	0/1:3,0:3:31.74:32,0,41	0/1:8,0:8:30.77:31,0,62	0/0:7,0:7:5.13:0,5,65	0/0:3,0:3:9.03:0,9,164	1/1:12,4:16:39.13:776,39,0	1/1:9,4:12:33.06:613,33,0	1/1:3,1:4:5.98:93,6,0
chr10	100673596	.	T	TAA	2866.89	PASS	AC=22;AF=0.407;AN=54;BaseQRankSum=0.310;DP=215;FS=11.820;HRun=1;HaplotypeScore=102.5935;InbreedingCoeff=0.8218;MQ=55.53;MQ0=3;MQRankSum=-4.275;QD=35.84;ReadPosRankSum=-0.647;VQSLOD=2.6255;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:32.11:0,32,339	0/0:7,0:7:18.48:0,18,186	./.	0/0:19,0:5:11.65:0,12,96	1/1:5,5:10:17.93:230,18,0	1/1:4,4:8:23.95:272,24,0	1/1:1,4:5:14.99:173,15,0	1/1:1,6:8:21.06:384,21,0	0/0:5,0:5:15.05:0,15,238	0/0:1,0:1:3.01:0,3,49	0/0:5,0:5:15.05:0,15,244	0/0:12,0:12:31.96:0,32,302	0/0:1,0:1:3.01:0,3,49	0/0:6,0:6:0.99:0,1,164	0/0:18,0:18:53.43:0,53,571	1/1:1,3:4:12:145,12,0	0/0:21,0:21:63.13:0,63,908	0/0:5,0:5:15.03:0,15,218	1/1:5,6:10:27.09:527,27,0	1/1:5,0:5:14.95:187,15,0	1/1:0,3:3:5.98:58,6,0	0/0:3,0:3:9:0,9,99	0/0:6,0:6:9.03:0,9,124	0/0:6,0:6:6.29:0,6,84	0/0:3,0:3:9.03:0,9,146	1/1:4,9:13:39.07:599,39,0	1/1:8,3:11:32.89:431,33,0	1/1:1,1:2:5.98:63,6,0
chr10	100673601	.	ATATAT	A	1611.84	PASS	AB=1.000;AC=28;AF=0.519;AN=54;BaseQRankSum=8.632;DP=194;FS=11.973;HRun=0;HaplotypeScore=112.3376;InbreedingCoeff=0.5350;MQ=55.24;MQ0=3;MQRankSum=-7.568;QD=13.78;ReadPosRankSum=5.298;VQSLOD=1.4298;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,4:12:17.50:152,18,0	1/1:1,6:7:18.05:220,18,0	0/0:5,0:2:0.47:0,0,1	0/0:18,0:5:6.88:0,7,70	1/1:9,0:9:2.89:34,3,0	0/1:8,0:8:4.74:91,0,5	0/0:4,0:4:0.89:0,1,2	0/0:5,0:5:7.09:0,7,42	0/0:5,0:5:15.03:0,15,265	0/0:1,0:1:3.01:0,3,68	0/0:3,0:3:9.03:0,9,198	1/1:2,8:10:18.81:304,19,0	0/0:1,0:1:3.01:0,3,100	1/1:3,3:6:12.04:148,12,0	1/1:9,5:14:28.44:261,28,0	1/1:4,0:4:2.48:33,2,0	0/0:16,0:16:48.16:0,48,1065	0/0:6,0:6:18.02:0,18,331	1/1:11,0:10:3.42:28,3,0	0/1:5,0:5:18.13:88,0,18	./.	1/1:1,1:2:5.51:48,6,0	1/1:3,1:4:3.01:39,3,0	0/0:4,2:6:1.25:0,1,4	0/0:3,0:3:9.03:0,9,198	1/1:13,0:13:8.77:143,9,0	1/1:10,0:10:10.60:158,11,0	1/1:2,0:2:3.01:34,3,0
chr10	100673612	.	TA	T	1040.19	PASS	AB=0.804;AC=24;AF=0.429;AN=56;BaseQRankSum=6.107;DP=207;FS=0.626;HRun=1;HaplotypeScore=115.3295;InbreedingCoeff=0.2608;MQ=48.45;MQ0=4;MQRankSum=-3.657;QD=8.32;ReadPosRankSum=4.385;VQSLOD=1.2127;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,2:14:0.87:1,0,74	0/1:8,2:10:17.03:17,0,31	0/0:6,0:1:0.47:0,0,1	0/0:20,0:4:0.86:0,1,60	0/1:5,5:10:10.62:34,0,11	1/1:4,5:9:13.05:64,13,0	0/1:2,2:4:4.91:14,0,5	1/1:0,4:4:12.04:161,12,0	0/0:2,0:2:6.01:0,6,76	0/0:1,0:1:3.01:0,3,38	0/0:1,0:1:3.01:0,3,38	0/1:11,4:15:21.42:21,0,73	0/0:1,0:1:3.01:0,3,48	1/1:6,1:7:4.72:17,5,0	0/0:16,6:22:5.83:0,6,208	0/1:4,0:4:2.52:24,0,3	0/0:15,0:15:31.21:0,31,257	0/0:4,0:4:9.65:0,10,81	0/1:3,6:8:4.68:218,0,5	1/1:3,3:6:16.02:83,16,0	0/0:1,0:1:0:0,0,0	0/1:2,0:2:1.54:2,0,29	1/1:1,0:1:2.22:7,2,0	0/0:5,3:8:5.99:0,6,17	0/0:1,0:1:3.01:0,3,48	1/1:8,8:16:6.18:236,6,0	1/1:4,7:11:30.40:233,30,0	1/1:1,2:3:8.21:68,8,0
chr10	100673627	.	A	AAG	5216.30	PASS	AB=1.000;AC=39;AF=0.780;AN=50;BaseQRankSum=3.743;DP=229;FS=1.720;HRun=0;HaplotypeScore=116.3303;InbreedingCoeff=0.6112;MQ=63.91;MQ0=3;MQRankSum=-7.227;QD=25.82;ReadPosRankSum=0.314;VQSLOD=5.5103;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,2:9:23.86:265,24,0	1/1:9,2:11:32.67:330,33,0	0/1:10,0:7:5.70:6,0,22	0/1:17,0:5:6.28:6,0,11	1/1:13,0:13:25.36:283,25,0	1/1:9,0:9:27.01:301,27,0	1/1:5,0:5:12.04:161,12,0	1/1:18,0:18:54.18:747,54,0	0/1:2,0:2:4.89:5,0,43	./.	./.	1/1:10,4:14:41.55:380,42,0	0/0:1,0:1:3.01:0,3,49	1/1:7,1:8:20.81:210,21,0	1/1:8,6:15:41.60:433,42,0	1/1:4,0:4:9:123,9,0	0/0:14,0:14:41.96:0,42,436	0/0:5,0:5:14.99:0,15,159	1/1:12,0:11:29.97:405,30,0	1/1:8,0:8:24:249,24,0	./.	1/1:2,0:2:5.94:43,6,0	1/1:5,0:5:8.96:84,9,0	1/1:6,3:9:11.69:139,12,0	0/0:2,0:2:6.02:0,6,93	1/1:13,0:13:39.03:443,39,0	1/1:13,0:12:38.99:432,39,0	1/1:5,0:5:15.02:172,15,0
chr10	100674090	.	G	GTCTC	9380.43	PASS	AB=0.627;AC=30;AF=0.556;AN=54;BaseQRankSum=2.895;DP=717;FS=1.828;HRun=0;HaplotypeScore=160.8297;InbreedingCoeff=0.7460;MQ=57.15;MQ0=10;MQRankSum=-4.219;QD=25.01;ReadPosRankSum=2.568;VQSLOD=4.7773;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,30:42:5.19:0,5,16	1/1:4,10:14:14.47:347,14,0	0/0:44,0:22:52.96:0,53,836	0/0:49,0:32:61.84:0,62,1157	1/1:6,25:28:6.02:141,6,0	1/1:8,10:18:12.04:312,12,0	1/1:10,0:9:15.03:295,15,0	1/1:43,0:40:47.31:1391,47,0	0/0:23,0:23:69.24:0,69,1304	0/0:23,0:21:55.54:0,56,1079	0/0:13,0:13:36.12:0,36,683	0/1:13,18:31:90.55:176,0,91	0/0:24,0:24:66.23:0,66,1251	0/1:7,11:18:24.48:88,0,24	1/1:10,17:27:11.99:208,12,0	1/1:11,16:27:33.11:855,33,0	0/0:30,0:30:81.26:0,81,1504	0/0:23,0:23:63.22:0,63,1164	1/1:9,17:24:63.19:1291,63,0	1/1:23,0:23:54.17:1210,54,0	./.	1/1:26,4:30:35.91:839,36,0	1/1:1,22:23:3.01:31,3,0	0/0:12,20:31:1.22:0,1,22	0/0:13,0:13:30.10:0,30,569	1/1:23,0:22:44.21:1246,44,0	1/1:6,15:21:21.07:490,21,0	1/1:10,0:10:21.07:459,21,0
chr10	100674092	.	CTG	C	3805.35	PASS	AB=0.803;AC=16;AF=0.296;AN=54;BaseQRankSum=7.241;DP=703;FS=0.907;HRun=0;HaplotypeScore=160.1167;InbreedingCoeff=0.5310;MQ=56.13;MQ0=14;MQRankSum=-4.338;QD=15.86;ReadPosRankSum=0.511;VQSLOD=3.7764;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:40:6.70:0,7,113	0/0:13,0:13:1.54:0,2,92	0/0:45,0:21:42.67:0,43,761	0/0:49,0:30:71.30:0,71,978	0/1:30,1:28:3.37:37,0,3	0/0:11,6:17:8.60:0,9,33	1/1:2,8:9:12.04:171,12,0	0/1:26,17:40:99:723,0,326	0/0:24,0:24:72.23:0,72,1234	0/0:24,0:22:60.21:0,60,1032	0/0:13,0:13:36.12:0,36,616	0/0:30,0:30:13.96:0,14,247	0/0:23,0:23:66.23:0,66,1173	0/0:18,0:18:5.51:0,6,146	0/0:26,0:26:9.34:0,9,105	0/1:16,9:25:66.13:74,0,66	0/0:29,0:29:81.28:0,81,1451	0/0:22,0:22:63.19:0,63,1073	1/1:21,4:23:30.02:716,30,0	1/1:3,20:23:20.69:599,21,0	./.	1/1:15,17:30:28.22:425,28,0	0/0:22,0:22:3:0,3,27	0/0:31,0:30:5.62:0,6,53	0/0:11,0:11:30.10:0,30,501	1/1:3,19:21:3.85:651,4,0	0/1:14,5:19:8.51:157,0,9	1/1:0,10:10:14.92:252,15,0
chr10	100674134	.	C	CTG	983.55	PASS	AB=0.981;AC=26;AF=0.464;AN=56;BaseQRankSum=9.946;DP=497;FS=0.528;HRun=0;HaplotypeScore=160.2049;InbreedingCoeff=0.2577;MQ=43.30;MQ0=21;MQRankSum=-7.160;QD=3.15;ReadPosRankSum=-0.933;VQSLOD=2.7165;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,5:18:4.89:75,0,5	1/1:11,2:13:9.12:104,9,0	0/0:31,0:9:1.79:0,2,185	0/0:39,0:16:8.03:0,8,294	0/0:13,0:11:2.57:0,3,10	0/1:14,0:13:6.24:6,0,7	1/1:15,0:14:2.87:15,3,0	0/1:29,0:27:43.01:43,0,253	0/0:18,0:18:51.17:0,51,728	0/0:10,0:10:30.08:0,30,394	0/0:5,0:4:9.03:0,9,128	1/1:14,8:22:27.95:321,28,0	0/0:14,0:14:39.12:0,39,542	1/1:13,4:17:13.64:169,14,0	1/1:15,5:20:8.82:110,9,0	0/1:25,0:22:18.49:18,0,67	0/0:29,0:29:75.25:0,75,1067	0/0:18,0:18:45.58:0,46,615	0/1:17,0:17:54.60:55,0,76	0/1:10,0:10:5.31:5,0,12	0/1:12,0:12:0:0,0,0	1/1:19,3:20:1.37:12,1,0	1/1:12,0:11:1.81:46,2,0	1/1:17,8:24:5.97:62,6,0	0/0:8,0:8:18.06:0,18,251	0/1:11,0:10:37.24:37,0,77	0/1:20,0:17:1.87:52,0,2	0/1:7,0:7:2.28:21,0,2
chr10	100674137	.	TCC	T	2357.20	PASS	AB=0.695;AC=27;AF=0.482;AN=56;BaseQRankSum=9.348;DP=450;FS=12.474;HRun=2;HaplotypeScore=136.1832;InbreedingCoeff=0.2931;MQ=43.30;MQ0=16;MQRankSum=-6.782;QD=8.80;ReadPosRankSum=0.629;VQSLOD=-0.6372;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,1:13:4.80:75,0,5	1/1:7,2:9:6.01:96,6,0	0/0:31,0:9:12.09:0,12,257	0/0:40,0:16:3.19:0,3,318	0/0:6,6:11:2.55:0,3,10	0/1:5,8:12:7.02:42,0,7	1/1:2,12:13:2.72:48,3,0	0/1:14,14:27:99:557,0,246	0/0:17,0:17:51.17:0,51,953	0/0:11,0:11:30.08:0,30,487	0/0:6,0:6:8.86:0,9,146	1/1:17,3:20:10.32:151,10,0	0/0:14,0:14:39.13:0,39,730	1/1:12,2:14:4.69:108,5,0	1/1:10,5:15:5.19:82,5,0	0/1:9,14:20:61.45:161,0,61	0/0:26,0:26:75:0,75,1412	0/0:16,1:17:45.63:0,46,864	0/1:7,10:17:67.37:434,0,67	0/1:2,7:9:4.96:5,0,13	0/1:8,3:11:0:0,0,0	0/1:11,2:13:0.07:0,0,1	1/1:8,1:8:2.81:48,3,0	1/1:20,4:23:5.70:62,6,0	0/0:8,0:8:18.06:0,18,347	0/1:2,6:8:99:211,0,114	1/1:5,15:17:4.94:294,5,0	1/1:0,7:7:11.40:154,11,0
chr10	100674138	.	CCG	C	1247.11	PASS	AB=0.992;AC=25;AF=0.446;AN=56;BaseQRankSum=9.835;DP=445;FS=7.425;HRun=0;HaplotypeScore=137.9929;InbreedingCoeff=0.2536;MQ=43.27;MQ0=18;MQRankSum=-7.492;QD=4.95;ReadPosRankSum=1.686;VQSLOD=2.7247;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:13:19.14:45,0,19	1/1:9,0:9:6:59,6,0	0/0:32,0:9:5.17:0,5,278	0/0:40,0:16:25.48:0,25,437	0/0:11,0:10:2.98:0,3,25	0/1:11,0:10:17.57:18,0,41	1/1:14,0:13:2.72:39,3,0	0/1:28,0:27:99:308,0,212	0/0:19,0:19:54.17:0,54,978	0/0:12,0:12:27.09:0,27,469	0/0:6,0:6:8.85:0,9,130	1/1:18,2:20:18.81:82,19,0	0/0:14,0:14:39.13:0,39,735	1/1:13,1:14:9.58:67,10,0	1/1:15,0:15:5.08:47,5,0	0/1:22,0:19:70.40:70,0,112	0/0:26,0:26:74.97:0,75,1397	0/0:17,0:17:45.63:0,46,882	0/1:15,0:15:77.53:231,0,78	0/0:8,0:8:5.94:0,6,43	0/1:10,0:10:0:0,0,0	0/1:12,1:13:0.07:0,0,1	1/1:6,1:6:2.81:32,3,0	1/1:24,0:23:3.62:28,4,0	0/0:8,0:8:18.06:0,18,348	0/1:8,0:8:99:119,0,100	1/1:20,0:17:6.18:198,6,0	0/1:7,0:7:11.98:76,0,12
chr10	100674146	.	CCG	C	658.88	PASS	AB=0.983;AC=18;AF=0.333;AN=54;BaseQRankSum=7.284;DP=405;FS=28.655;HRun=0;HaplotypeScore=135.1207;InbreedingCoeff=0.3716;MQ=43.40;MQ0=12;MQRankSum=-6.942;QD=3.99;ReadPosRankSum=0.571;VQSLOD=1.4067;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:13:5.45:28,5,0	0/0:8,0:8:5.95:0,6,45	0/0:19,0:7:18.02:0,18,204	0/0:27,1:12:9.65:0,10,309	0/1:11,0:10:0:0,0,0	1/1:10,1:12:2.22:23,2,0	1/1:14,2:15:2.69:23,3,0	0/1:22,0:21:82.93:264,0,83	0/0:16,0:16:45.14:0,45,875	0/0:10,0:9:18.53:0,19,338	0/0:3,0:3:2.84:0,3,61	0/0:20,0:20:6.96:0,7,108	0/0:16,0:16:39.13:0,39,740	0/0:14,0:14:7.94:0,8,60	0/0:18,0:18:5.69:0,6,52	0/1:16,0:15:5.32:63,0,5	0/0:24,0:24:60.65:0,61,1183	0/0:18,0:18:48.53:0,49,880	0/1:13,0:13:49.89:146,0,50	1/1:8,0:8:0.14:1,0,0	./.	0/1:14,0:14:0.42:1,0,0	0/0:7,0:6:1.74:0,2,6	0/0:24,0:23:0.33:0,0,2	0/0:8,0:8:18.06:0,18,346	0/1:9,0:9:68.40:68,0,163	1/1:17,1:16:19.29:109,19,0	1/1:7,0:7:11.76:82,12,0
chr10	100674150	.	CCG	C	1023.86	PASS	AB=0.888;AC=28;AF=0.519;AN=54;BaseQRankSum=8.894;DP=402;FS=9.381;HRun=0;HaplotypeScore=135.7028;InbreedingCoeff=0.4414;MQ=43.06;MQ0=16;MQRankSum=-8.280;QD=3.68;ReadPosRankSum=0.134;VQSLOD=2.2653;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,4:14:0.47:1,0,0	0/0:5,3:8:0.13:0,0,1	0/1:17,0:7:33.98:34,0,85	0/1:21,2:11:34.64:35,0,67	0/1:12,0:11:0:0,0,0	1/1:14,1:13:2.22:24,2,0	1/1:14,2:15:2.71:28,3,0	1/1:20,0:19:38.82:297,39,0	0/0:15,0:15:42.11:0,42,563	0/0:9,0:8:15.04:0,15,214	0/0:3,0:3:2.84:0,3,48	1/1:15,6:21:9.87:220,10,0	0/0:14,0:14:32.94:0,33,427	1/1:9,6:15:5.93:45,6,0	0/0:14,3:17:2.13:0,2,9	1/1:18,0:15:5.41:49,5,0	0/0:22,0:22:56.58:0,57,787	0/0:18,0:18:44.86:0,45,522	1/1:15,0:13:26.78:184,27,0	0/1:8,0:8:0.02:0,0,0	./.	0/1:8,6:14:0.40:1,0,0	0/1:4,3:6:0:0,0,0	0/1:18,7:24:0.26:1,0,0	0/0:9,0:9:18.04:0,18,240	0/1:10,0:10:47.05:111,0,47	1/1:18,1:16:16.44:95,16,0	1/1:7,0:7:8.66:58,9,0
chr10	100674170	.	C	CG	210.22	PASS	AB=0.919;AC=9;AF=0.161;AN=56;BaseQRankSum=4.507;DP=475;FS=13.986;HRun=0;HaplotypeScore=117.3226;InbreedingCoeff=0.4408;MQ=43.92;MQ0=30;MQRankSum=-3.744;QD=2.34;ReadPosRankSum=-3.121;VQSLOD=0.9113;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,1:13:2.62:23,3,0	0/0:12,0:12:12.02:0,12,151	0/0:5,0:1:3.01:0,3,41	0/0:19,0:6:12.59:0,13,137	0/0:20,0:19:12.04:0,12,165	0/0:20,0:18:10.44:0,10,127	0/0:13,0:13:3.33:0,3,19	0/0:25,0:24:62.96:0,63,717	0/0:21,0:21:51.06:0,51,678	0/0:19,0:18:51.13:0,51,671	0/0:12,0:12:15.03:0,15,190	0/1:20,1:21:97.50:97,0,247	0/0:19,0:19:45.01:0,45,574	0/1:12,1:13:29.51:102,0,30	0/0:16,0:15:12.51:0,13,167	0/0:18,0:15:24.08:0,24,323	0/0:31,0:29:66.70:0,67,905	0/0:21,0:20:47:0,47,526	0/0:18,0:16:45.10:0,45,587	0/0:13,0:11:10.75:0,11,135	0/0:19,0:15:3.36:0,3,42	1/1:10,2:11:8.02:69,8,0	1/1:6,1:6:6.55:48,7,0	0/1:18,3:19:0.20:0,0,1	0/0:15,0:15:21.07:0,21,290	0/0:17,0:17:51.14:0,51,658	0/0:20,0:16:20.75:0,21,253	0/0:10,0:7:11.86:0,12,118
chr10	100674720	.	TTGTGTGTGTGTGTGTGTGTG	T	10263.56	PASS	AB=0.694;AC=15;AF=0.268;AN=56;BaseQRankSum=10.830;DP=691;FS=16.148;HRun=0;HaplotypeScore=363.2744;InbreedingCoeff=0.9102;MQ=68.21;MQ0=7;MQRankSum=-9.366;QD=55.78;ReadPosRankSum=2.945;VQSLOD=2.8623;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,15:34:0.04:835,0,0	1/1:8,5:13:15.05:799,15,0	0/0:31,0:19:5.98:0,6,80	0/0:38,0:28:15.03:0,15,274	0/0:30,0:30:24.06:0,24,1316	0/0:28,0:29:33.11:0,33,2149	0/0:18,0:18:21.07:0,21,973	0/0:41,0:41:53.96:0,54,2032	0/0:25,0:24:51.14:0,51,2845	0/0:30,0:30:54.17:0,54,2520	0/0:20,0:19:30.09:0,30,1755	1/1:14,20:34:27.09:1438,27,0	0/0:21,0:21:36.11:0,36,2713	1/1:8,15:23:30.10:1598,30,0	1/1:6,19:25:39.13:2077,39,0	0/0:26,0:25:36.12:0,36,1899	0/0:17,0:21:24.05:0,24,1311	0/0:13,0:14:34.88:0,35,1447	0/0:21,0:20:29.69:0,30,1389	0/0:20,0:26:36.12:0,36,2463	0/0:27,0:27:34.36:0,34,2062	1/1:5,17:22:30.10:1598,30,0	1/1:6,10:16:25.19:1600,25,0	1/1:8,9:17:6.02:319,6,0	0/0:24,0:23:37.34:0,37,2659	0/0:28,0:25:48.13:0,48,2753	0/0:25,0:25:33.11:0,33,2296	0/0:8,0:8:18.04:0,18,526
chr10	100674921	.	AAAC	A	10972.85	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=6.045;DP=676;FS=14.504;HRun=0;HaplotypeScore=122.7927;InbreedingCoeff=0.6561;MQ=66.16;MQ0=2;MQRankSum=-1.464;QD=25.22;ReadPosRankSum=-0.153;VQSLOD=4.2807;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:47.34:47,0,141	1/1:16,0:16:35.54:150,36,0	0/0:20,0:17:51.12:0,51,832	0/0:12,0:11:22.90:0,23,358	1/1:2,32:34:90.14:1338,90,0	1/1:0,36:36:72.25:1224,72,0	1/1:1,23:24:36.12:609,36,0	1/1:2,30:32:90.21:1282,90,0	0/0:27,0:26:40.45:0,40,1217	0/0:38,0:38:99:0,114,2314	0/0:29,0:29:84.23:0,84,1584	0/0:21,0:21:19.39:0,19,168	0/0:32,0:32:90.27:0,90,1736	0/1:29,0:29:88.89:125,0,89	1/1:23,0:23:54.78:240,55,0	1/1:1,23:23:48.16:817,48,0	0/0:23,0:23:65.44:0,65,1091	0/0:12,0:12:36.01:0,36,679	1/1:1,20:20:60.18:869,60,0	1/1:1,26:27:78.23:1244,78,0	1/1:0,10:10:24.08:392,24,0	0/1:26,0:25:10.34:10,0,152	0/1:18,0:18:6.96:7,0,110	0/1:21,0:21:20.43:20,0,79	0/0:27,0:27:81.25:0,81,1562	1/1:1,25:26:74.94:1093,75,0	1/1:2,31:33:75.04:1224,75,0	1/1:2,7:9:20.65:281,21,0
chr10	100674922	.	AAC	A	6644.49	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=15.681;DP=668;FS=9.598;HRun=0;HaplotypeScore=125.3846;InbreedingCoeff=0.8395;MQ=65.83;MQ0=2;MQRankSum=-1.868;QD=14.80;ReadPosRankSum=2.042;VQSLOD=4.6321;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:44.16:76,0,44	1/1:14,1:15:41.88:359,42,0	0/0:21,0:18:47.41:0,47,753	0/0:11,0:10:11.39:0,11,302	1/1:33,0:33:86.88:661,87,0	1/1:36,0:36:71.91:599,72,0	1/1:24,0:24:35.95:297,36,0	1/1:30,1:31:87.76:662,88,0	0/0:28,0:27:68.69:0,69,1063	0/0:38,0:38:99:0,114,1906	0/0:28,0:28:84.24:0,84,1315	1/1:19,0:19:2.48:22,2,0	0/0:31,0:31:90.26:0,90,1444	1/1:29,0:29:23.67:155,24,0	1/1:22,1:23:62.93:569,63,0	1/1:24,0:23:47.95:400,48,0	0/0:23,0:23:65.87:0,66,931	0/0:12,0:12:36.01:0,36,557	1/1:21,0:20:56.87:383,57,0	1/1:27,0:27:76.39:597,76,0	1/1:10,0:10:23.47:184,23,0	1/1:25,0:24:29.49:98,29,0	0/1:18,0:18:1.09:47,0,1	1/1:21,0:21:12.61:79,13,0	0/0:27,0:27:81.23:0,81,1283	1/1:25,1:26:74.27:605,74,0	1/1:32,1:33:74.68:633,75,0	1/1:7,2:9:21:217,21,0
chr10	100674923	.	AC	A	7099.02	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=17.549;DP=665;FS=5.269;HRun=1;HaplotypeScore=111.5599;InbreedingCoeff=0.9944;MQ=66.62;MQ0=2;MQRankSum=-3.794;QD=15.92;ReadPosRankSum=2.108;VQSLOD=5.1309;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:12.66:225,13,0	1/1:1,14:15:42.01:536,42,0	0/0:21,0:18:47.38:0,47,637	0/0:12,0:11:30.88:0,31,318	1/1:33,0:33:80.77:511,81,0	1/1:36,0:36:70.91:457,71,0	1/1:23,0:23:35.43:226,35,0	1/1:31,0:31:82.24:539,82,0	0/0:27,0:26:67.49:0,67,859	0/0:38,0:38:99:0,114,1516	0/0:28,0:28:84.23:0,84,1075	1/1:20,0:20:47.47:235,47,0	0/0:31,0:31:93.24:0,93,1182	1/1:29,0:29:65.42:394,65,0	1/1:1,21:22:63.18:852,63,0	1/1:23,0:22:47.30:306,47,0	0/0:23,0:23:65.86:0,66,780	0/0:12,0:12:36.01:0,36,446	1/1:21,0:20:51.16:297,51,0	1/1:26,0:26:72.87:458,73,0	1/1:10,0:10:21.94:137,22,0	1/1:25,0:24:64.78:359,65,0	1/1:17,0:17:35.81:244,36,0	1/1:22,0:22:39.99:238,40,0	0/0:27,0:27:81.21:0,81,1032	1/1:26,0:26:72.01:465,72,0	1/1:32,0:32:73.93:481,74,0	1/1:9,0:9:20.73:138,21,0
chr10	100674932	.	A	AC	4435.92	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=2.615;DP=679;FS=0.000;HRun=1;HaplotypeScore=123.3302;InbreedingCoeff=0.9293;MQ=69.56;MQ0=2;MQRankSum=-0.076;QD=22.63;ReadPosRankSum=0.539;VQSLOD=4.7439;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:48.11:634,48,0	1/1:15,0:15:44.22:299,44,0	0/0:23,0:20:57.06:0,57,685	0/0:13,0:13:27.07:0,27,300	0/0:30,0:30:32.96:0,33,518	0/0:36,0:36:73.53:0,74,624	0/0:22,0:22:28.70:0,29,254	0/0:38,0:38:59.10:0,59,631	0/0:23,0:22:57.59:0,58,767	0/0:44,0:44:99:0,129,1586	0/0:26,0:26:78.23:0,78,982	1/1:2,19:21:51.05:672,51,0	0/0:30,0:30:90.12:0,90,1088	1/1:0,25:26:57.08:747,57,0	1/1:22,0:22:62.28:429,62,0	0/0:28,0:27:62.79:0,63,522	0/0:24,0:24:63.15:0,63,779	0/0:10,0:10:30.10:0,30,387	0/1:21,0:20:6.43:6,0,233	0/0:29,0:29:31.06:0,31,559	0/0:12,0:12:21.69:0,22,227	1/1:0,22:24:69.04:880,69,0	1/1:3,14:18:26.28:348,26,0	1/1:3,19:23:33.01:421,33,0	0/0:25,0:25:75.20:0,75,937	0/0:25,0:25:51.96:0,52,475	0/0:33,0:33:83.16:0,83,646	0/0:11,0:11:26.83:0,27,206
chr10	100675490	.	CA	C	6154.30	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.119;DP=644;FS=1.089;HRun=1;HaplotypeScore=63.3774;InbreedingCoeff=0.9921;MQ=71.47;MQ0=0;MQRankSum=-0.114;QD=35.99;ReadPosRankSum=4.192;VQSLOD=5.1262;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:51.13:683,51,0	1/1:0,8:8:21.07:291,21,0	0/0:7,0:7:11.23:0,11,217	0/0:12,0:12:23.23:0,23,375	0/0:34,0:34:99:0,102,1561	0/0:29,0:29:81.23:0,81,1211	0/0:13,0:13:39.12:0,39,594	0/0:29,0:29:87.22:0,87,1183	0/0:20,0:20:57.15:0,57,835	0/0:30,0:30:86.25:0,86,1248	0/0:36,0:36:99:0,102,1562	1/1:0,31:31:81.27:1118,81,0	0/0:19,0:19:54.16:0,54,810	1/1:0,18:18:48.16:663,48,0	1/1:0,24:24:66.22:917,66,0	0/0:26,0:26:73.64:0,74,1138	0/0:17,0:17:51.08:0,51,732	0/0:7,0:7:20.99:0,21,255	0/0:28,0:28:81.17:0,81,1153	0/0:52,0:52:99:0,157,2424	0/0:18,0:18:54.13:0,54,783	1/1:1,22:23:54.37:820,54,0	1/1:0,30:30:84.28:1163,84,0	1/1:0,15:15:36.12:499,36,0	0/0:19,0:19:57.16:0,57,856	0/0:26,0:26:75.24:0,75,1153	0/0:28,0:28:84.23:0,84,1261	0/0:23,0:23:63.08:0,63,953
chr10	100676675	.	TAA	T	9921.85	PASS	AB=0.515;AC=37;AF=0.661;AN=56;BaseQRankSum=19.289;DP=675;FS=10.720;HRun=2;HaplotypeScore=160.6276;InbreedingCoeff=0.9183;MQ=47.31;MQ0=3;MQRankSum=-18.525;QD=24.99;ReadPosRankSum=0.480;VQSLOD=2.7034;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:21:50.98:480,51,0	1/1:1,6:7:17.97:168,18,0	0/0:33,0:28:84.23:0,84,1563	0/0:40,0:31:92.94:0,93,1605	1/1:2,20:23:59.82:524,60,0	1/1:0,22:22:66.12:648,66,0	1/1:0,18:17:48.08:467,48,0	1/1:0,24:21:63.10:645,63,0	0/0:31,0:31:93.30:0,93,1829	0/0:29,0:29:87.30:0,87,1760	0/0:15,0:15:45.15:0,45,903	1/1:2,26:28:83.96:784,84,0	0/0:23,0:23:69.24:0,69,1376	1/1:0,20:20:59.97:557,60,0	1/1:1,30:32:95.86:878,96,0	1/1:7,21:29:32.24:732,32,0	0/0:47,0:46:99:0,138,2763	0/0:29,0:29:82.03:0,82,1648	1/1:10,4:12:14.98:142,15,0	1/1:1,32:33:99:955,99,0	1/1:2,6:7:11.96:107,12,0	1/1:0,22:25:68.87:624,69,0	1/1:0,17:18:54.07:515,54,0	1/1:0,10:11:23.94:206,24,0	0/0:26,0:26:78.26:0,78,1550	0/1:1,16:17:10.10:412,0,10	1/1:1,30:31:90.02:856,90,0	1/1:1,7:8:23.98:222,24,0
chr10	100676678	.	GT	G	7414.26	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=19.536;DP=684;FS=7.877;HRun=1;HaplotypeScore=160.0172;InbreedingCoeff=0.9595;MQ=47.60;MQ0=3;MQRankSum=-17.617;QD=18.63;ReadPosRankSum=0.545;VQSLOD=4.4438;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:22:52.84:381,53,0	1/1:0,6:6:17.16:121,17,0	0/0:40,0:30:87.25:0,87,1333	0/0:43,0:31:93.31:0,93,1426	1/1:3,20:23:56.87:374,57,0	1/1:2,21:23:68.69:522,69,0	1/1:1,18:17:46.83:345,47,0	1/1:1,24:21:61.93:493,62,0	0/0:30,0:30:90.26:0,90,1369	0/0:29,0:29:87.30:0,87,1389	0/0:15,0:15:45.15:0,45,719	1/1:3,26:28:78.55:563,79,0	0/0:24,0:24:72.21:0,72,1117	1/1:2,20:21:59.95:427,60,0	1/1:2,30:32:89.81:629,90,0	1/1:7,21:27:33.64:516,34,0	0/0:48,0:47:99:0,135,2128	0/0:30,0:30:79.43:0,79,1309	1/1:9,4:10:14.01:101,14,0	1/1:2,32:34:98.45:721,98,0	1/1:1,6:7:14.17:98,14,0	1/1:2,22:24:62.78:427,63,0	1/1:2,17:19:56.37:409,56,0	1/1:1,10:11:20.25:130,20,0	0/0:27,0:27:81.28:0,81,1287	1/1:1,16:17:1.82:303,2,0	1/1:1,30:31:86.05:628,86,0	1/1:5,7:11:31.69:227,32,0
chr10	100676679	.	T	TG	5766.67	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=19.050;DP=718;FS=12.423;HRun=1;HaplotypeScore=176.0242;InbreedingCoeff=0.9856;MQ=47.07;MQ0=3;MQRankSum=-17.320;QD=13.32;ReadPosRankSum=-0.341;VQSLOD=2.6933;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:25:49.22:269,49,0	1/1:7,0:7:15.07:70,15,0	0/0:40,0:30:84.27:0,84,1078	0/0:42,0:31:93.19:0,93,1128	1/1:22,2:24:50.46:289,50,0	1/1:22,1:22:65.35:351,65,0	1/1:23,0:21:48.46:260,48,0	1/1:30,0:26:72.78:479,73,0	0/0:28,0:28:84.26:0,84,1076	0/0:30,0:30:87.28:0,87,1129	0/0:15,0:15:45.15:0,45,584	1/1:31,2:31:77.22:534,77,0	0/0:24,0:24:69.22:0,69,894	1/1:22,0:21:53.25:256,53,0	1/1:33,1:34:85.23:468,85,0	1/1:29,3:31:77.58:523,78,0	0/0:46,1:46:99:0,132,1683	0/0:32,0:32:86.46:0,86,1080	1/1:13,0:10:11.50:59,12,0	1/1:34,1:35:95.93:525,96,0	1/1:8,0:8:12.53:86,13,0	1/1:27,0:27:57.99:321,58,0	1/1:21,0:20:55.04:290,55,0	1/1:12,0:12:16.93:69,17,0	0/0:27,0:27:81.24:0,81,1035	1/1:20,0:20:22.98:321,23,0	1/1:31,1:32:84.57:444,85,0	1/1:11,0:10:26.06:154,26,0
chr10	100678707	.	T	TC	9732.73	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-16.960;DP=644;FS=0.000;HRun=4;HaplotypeScore=57.0335;InbreedingCoeff=0.9955;MQ=81.64;MQ0=0;MQRankSum=-1.558;QD=35.26;ReadPosRankSum=-0.458;VQSLOD=4.8603;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.24:0,90,1007	0/0:12,0:12:33.04:0,33,351	0/0:17,0:17:41.79:0,42,414	0/0:24,0:24:57.02:0,57,577	1/1:1,22:23:63.16:834,63,0	1/1:0,22:22:66.22:897,66,0	1/1:2,24:26:66.22:896,66,0	1/1:3,31:34:93.28:1218,93,0	0/0:24,0:24:69.16:0,69,753	0/0:24,0:24:66.17:0,66,733	0/0:16,0:16:42.12:0,42,475	0/0:20,0:20:54.15:0,54,612	0/0:22,0:22:63.17:0,63,706	0/0:20,0:20:57.15:0,57,636	0/0:28,0:28:78.22:0,78,876	1/1:3,23:26:66.22:897,66,0	0/0:30,0:30:87.20:0,87,954	0/0:18,0:18:45.10:0,45,490	1/1:3,18:21:54.12:682,54,0	1/1:1,21:22:60.20:812,60,0	1/1:0,30:30:75.25:1019,75,0	0/0:15,0:15:45.13:0,45,509	0/0:20,0:20:60.16:0,60,671	0/0:26,0:26:69.19:0,69,774	0/0:21,0:21:62.75:0,63,679	1/1:1,30:31:56.28:1130,56,0	1/1:3,32:34:89.04:1184,89,0	1/1:0,6:6:12.04:163,12,0
chr10	100679946	.	G	GA	4520.65	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=1.147;DP=631;FS=5.865;HRun=7;HaplotypeScore=99.6209;InbreedingCoeff=0.9875;MQ=67.01;MQ0=1;MQRankSum=-8.627;QD=29.94;ReadPosRankSum=2.340;VQSLOD=4.5513;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:36:96.29:1140,96,0	0/0:10,0:10:27.04:0,27,261	0/0:31,0:25:55.12:0,55,485	0/0:31,1:23:24.58:0,25,224	0/0:22,0:22:53.96:0,54,513	0/0:22,0:22:51.07:0,51,492	0/0:30,0:30:72.10:0,72,689	0/0:22,0:22:51.07:0,51,488	0/0:24,0:24:69.09:0,69,661	0/0:15,0:15:42.06:0,42,404	0/0:21,0:21:57.09:0,57,550	1/1:3,17:20:54.16:644,54,0	0/0:22,0:22:63.08:0,63,602	1/1:3,16:19:45.09:518,45,0	0/0:23,0:23:69.11:0,69,666	0/0:25,0:25:75.05:0,75,698	0/0:42,0:42:99:0,120,1145	0/0:23,0:23:54.03:0,54,511	0/0:17,0:17:45.07:0,45,434	0/0:19,0:19:42.05:0,42,405	0/0:13,0:13:27.04:0,27,261	1/1:5,21:25:60.18:708,60,0	1/1:3,21:24:63.11:717,63,0	1/1:3,23:26:66.20:794,66,0	0/0:22,0:22:66.09:0,66,633	0/0:19,0:19:51.07:0,51,487	0/0:23,0:22:54.07:0,54,515	0/0:3,0:3:9.01:0,9,87
chr10	100679956	.	A	AAAGG	5827.46	PASS	AC=22;AF=0.407;AN=54;BaseQRankSum=-10.234;DP=629;FS=2.974;HRun=0;HaplotypeScore=136.0351;InbreedingCoeff=0.9300;MQ=67.92;MQ0=4;MQRankSum=4.703;QD=25.34;ReadPosRankSum=-4.914;VQSLOD=3.9747;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:35:28.69:0,29,235	0/0:9,0:9:18.06:0,18,277	./.	0/0:24,0:16:0:0,0,0	1/1:11,14:26:42.06:868,42,0	1/1:12,13:26:30.10:703,30,0	1/1:19,10:30:21.54:464,22,0	1/1:22,0:22:11.90:119,12,0	0/0:23,0:23:60.18:0,60,879	0/0:17,0:17:24.08:0,24,370	0/0:23,0:23:48.16:0,48,741	0/0:11,0:19:22.76:0,23,189	0/0:23,0:23:42.14:0,42,648	0/0:13,0:19:16.83:0,17,144	0/0:23,0:23:21.07:0,21,320	1/1:13,11:24:33.11:774,33,0	0/0:42,0:42:28.17:0,28,932	0/0:20,0:20:18.43:0,18,297	1/1:14,5:19:18.06:422,18,0	1/1:8,8:16:21.07:477,21,0	1/1:8,6:15:6.02:141,6,0	0/0:10,0:21:28.25:0,28,247	0/0:13,0:24:32.36:0,32,270	0/0:20,0:23:9:0,9,80	0/0:27,0:27:60.20:0,60,901	1/1:11,12:24:39.13:880,39,0	1/1:10,13:23:33.58:769,34,0	1/1:1,3:4:9.03:211,9,0
chr10	100680685	.	GACACACACACACACACACACACACACAC	G	5291.48	PASS	AB=1.000;AC=17;AF=0.315;AN=54;BaseQRankSum=7.859;DP=598;FS=6.948;HRun=0;HaplotypeScore=306.0451;InbreedingCoeff=0.8297;MQ=50.06;MQ0=29;MQRankSum=-6.948;QD=21.69;ReadPosRankSum=3.769;VQSLOD=2.5441;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,1:31:5.14:217,5,0	1/1:9,12:20:11.73:857,12,0	./.	0/1:38,0:11:0.04:0,0,0	0/0:11,0:13:15.05:0,15,878	0/0:12,0:14:18.06:0,18,1139	0/0:30,0:29:34.28:0,34,1954	0/0:23,0:22:20.28:0,20,376	0/0:11,0:13:23.78:0,24,1995	0/0:24,0:23:41.09:0,41,2778	0/0:9,0:9:12.04:0,12,906	1/1:6,14:20:18.10:1474,18,0	0/0:11,0:14:23.77:0,24,1773	1/1:7,17:24:18.06:1275,18,0	1/1:16,15:30:9.03:639,9,0	0/0:15,0:15:18.53:0,19,951	0/0:24,0:31:50.86:0,51,3043	0/0:18,0:24:48.13:0,48,4156	0/0:16,0:16:32.79:0,33,1952	0/0:13,0:14:24.08:0,24,1481	0/0:38,0:32:27.09:0,27,1348	1/1:12,10:21:3.01:202,3,0	1/1:6,5:11:3.01:216,3,0	1/1:26,19:45:6.02:413,6,0	0/0:10,0:10:18.53:0,19,1226	0/0:13,0:13:33.11:0,33,1466	0/0:11,0:15:24.08:0,24,1681	0/0:4,0:3:9.03:0,9,537
chr10	100681131	.	TC	T	1236.10	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.347;DP=676;FS=1.328;HRun=3;HaplotypeScore=63.3615;InbreedingCoeff=0.9994;MQ=80.84;MQ0=0;MQRankSum=-3.229;QD=30.90;ReadPosRankSum=1.147;VQSLOD=3.6180;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1511	1/1:1,14:15:39.08:466,39,0	0/0:31,0:31:93.25:0,93,1204	0/0:28,0:28:75.11:0,75,999	0/0:23,0:23:66.22:0,66,943	0/0:30,0:30:87.20:0,87,1189	0/0:24,0:24:69.21:0,69,970	0/0:26,0:26:75.21:0,75,999	0/0:19,0:19:54.18:0,54,777	0/0:26,0:26:78.26:0,78,1122	0/0:19,0:19:57.14:0,57,795	0/0:29,0:29:81.27:0,81,1159	0/0:37,0:37:99:0,105,1509	0/0:17,0:17:51.17:0,51,734	1/1:0,25:25:72.23:892,72,0	0/0:27,0:27:81.26:0,81,1147	0/0:22,0:22:60.20:0,60,863	0/0:22,0:22:60.15:0,60,796	0/0:15,0:15:45.11:0,45,592	0/0:20,0:20:60.17:0,60,825	0/0:17,0:17:51.14:0,51,698	0/0:33,0:33:96.32:0,96,1366	0/0:28,0:28:81.27:0,81,1165	0/0:18,0:18:51.17:0,51,727	0/0:19,0:19:54.18:0,54,777	0/0:33,0:33:99:0,99,1393	0/0:29,0:29:84.27:0,84,1189	0/0:9,0:9:27.09:0,27,389
chr10	100682235	.	T	TG	5812.82	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.079;DP=661;FS=4.596;HRun=6;HaplotypeScore=71.7532;InbreedingCoeff=0.9997;MQ=87.55;MQ0=0;MQRankSum=-2.175;QD=31.59;ReadPosRankSum=3.230;VQSLOD=5.5242;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:31:72.23:905,72,0	1/1:0,14:14:36.12:452,36,0	0/0:27,0:27:63.08:0,63,616	0/0:21,0:21:38.84:0,39,355	0/0:23,0:23:66.15:0,66,673	0/0:36,0:36:96.19:0,96,971	0/0:34,0:34:93.21:0,93,948	0/0:20,0:20:54.11:0,54,545	0/0:27,0:27:75.15:0,75,758	0/0:19,0:19:48.10:0,48,489	0/0:23,0:23:63.10:0,63,624	1/1:1,22:23:57.18:717,57,0	0/0:25,0:25:66.13:0,66,666	1/1:1,20:21:54.17:678,54,0	1/1:1,24:25:66.21:830,66,0	0/0:31,0:31:93.21:0,93,949	0/0:21,0:21:57.11:0,57,573	0/0:13,0:13:33.07:0,33,337	0/0:19,0:19:45.06:0,45,442	0/0:35,0:35:96.21:0,96,979	0/0:18,0:18:54.10:0,54,543	1/1:5,20:26:29.58:684,30,0	1/1:0,21:21:63.20:791,63,0	1/1:2,21:23:60.19:755,60,0	0/0:23,0:23:66.15:0,66,673	0/0:21,0:22:62.17:0,62,618	0/0:31,0:31:84.19:0,84,856	0/0:9,0:9:27.06:0,27,275
chr10	100682378	.	G	GAC	7466.63	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-7.784;DP=643;FS=3.576;HRun=0;HaplotypeScore=71.6156;InbreedingCoeff=0.9970;MQ=86.56;MQ0=2;MQRankSum=-2.482;QD=45.53;ReadPosRankSum=2.997;VQSLOD=6.5496;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:18:51.17:931,51,0	1/1:1,8:10:24.08:433,24,0	0/0:23,0:23:33.84:0,34,805	0/0:19,0:20:16.72:0,17,651	0/0:23,0:23:69.21:0,69,968	0/0:40,0:40:99:0,117,1640	0/0:17,0:17:48.14:0,48,667	0/0:29,0:29:78.25:0,78,1086	0/0:22,0:22:63.17:0,63,848	0/0:30,0:30:81.27:0,81,1161	0/0:25,0:25:66.21:0,66,927	1/1:1,20:20:48.14:848,48,0	0/0:22,0:22:63.21:0,63,900	1/1:3,24:27:57.20:1045,57,0	1/1:3,19:22:57.20:1043,57,0	0/0:26,1:27:23.27:0,23,1020	0/0:20,0:20:54.16:0,54,755	0/0:14,0:14:42.11:0,42,577	0/0:19,0:19:51.15:0,51,697	0/0:33,0:33:90.28:0,90,1252	0/0:18,0:18:51.17:0,51,731	1/1:0,26:26:69.23:1242,69,0	1/1:0,27:27:81.28:1484,81,0	1/1:1,11:12:24.08:440,24,0	0/0:17,0:17:51.17:0,51,724	0/0:26,0:26:72.24:0,72,1032	0/0:28,0:28:81.27:0,81,1158	0/0:26,0:26:78.26:0,78,1117
chr10	100683156	.	TC	T	5838.56	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.402;DP=736;FS=0.324;HRun=3;HaplotypeScore=70.0602;InbreedingCoeff=0.9992;MQ=81.34;MQ0=0;MQRankSum=-1.399;QD=35.39;ReadPosRankSum=2.214;VQSLOD=5.4859;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:44:99:1599,129,0	0/0:14,0:14:42.14:0,42,602	0/0:20,0:20:60.16:0,60,788	0/0:21,0:21:47.97:0,48,623	0/0:26,0:26:72.24:0,72,1036	0/0:29,0:29:87.29:0,87,1247	0/0:29,0:29:87.29:0,87,1253	0/0:42,0:42:99:0,120,1728	0/0:27,0:27:78.26:0,78,1123	0/0:17,0:17:48.15:0,48,668	0/0:20,0:20:60.20:0,60,854	1/1:1,23:24:69.22:856,69,0	0/0:29,0:29:87.29:0,87,1250	1/1:0,24:24:72.23:892,72,0	0/0:37,0:37:99:0,111,1579	0/0:36,0:36:99:0,108,1537	0/0:34,0:34:96.30:0,96,1355	0/0:29,0:29:87.29:0,87,1253	0/0:27,0:27:81.25:0,81,1145	0/0:24,0:24:72.24:0,72,1037	0/0:37,0:37:99:0,105,1484	1/1:0,22:22:66.21:818,66,0	1/1:0,18:18:45.14:558,45,0	1/1:1,32:33:90.28:1116,90,0	0/0:18,0:17:54.18:0,54,778	0/0:30,0:30:90.30:0,90,1295	0/0:18,0:17:54.16:0,54,753	0/0:7,0:7:21.07:0,21,302
chr10	100685989	.	CAGA	C	5926.73	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.250;DP=541;FS=0.790;HRun=0;HaplotypeScore=83.8751;InbreedingCoeff=0.9980;MQ=90.63;MQ0=2;MQRankSum=-4.375;QD=38.99;ReadPosRankSum=3.474;VQSLOD=5.9596;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:78.27:1274,78,0	1/1:0,18:18:45.15:735,45,0	0/0:25,0:25:63.21:0,63,1320	0/0:24,0:24:53.28:0,53,1058	0/0:31,0:31:84.27:0,84,1834	0/0:18,0:18:51.18:0,51,1139	0/0:24,0:24:69.22:0,69,1499	0/0:23,0:23:66.23:0,66,1461	0/0:10,0:10:30.10:0,30,670	0/0:27,0:27:78.27:0,78,1741	0/0:23,0:23:66.19:0,66,1422	1/1:1,17:18:39.13:637,39,0	0/0:14,0:14:39.13:0,39,864	1/1:0,17:17:42.14:686,42,0	1/1:4,19:23:42.14:686,42,0	0/0:16,0:16:45.15:0,45,1004	0/0:18,0:18:51.16:0,51,1096	0/0:16,0:16:45.15:0,45,1005	0/0:18,0:18:54.15:0,54,1160	0/0:26,0:26:69.19:0,69,1476	0/0:11,0:11:27.09:0,27,602	1/1:0,14:14:39.13:637,39,0	1/1:2,18:20:54.18:881,54,0	1/1:1,9:10:24.08:392,24,0	0/0:14,0:14:39.13:0,39,871	0/0:23,0:23:69.24:0,69,1529	0/0:20,0:20:57.20:0,57,1273	0/0:8,0:6:18.02:0,18,352
chr10	100687142	.	T	TACACACACAC	3447.99	PASS	AB=0.897;AC=32;AF=0.640;AN=50;BaseQRankSum=4.044;DP=492;FS=5.087;HRun=0;HaplotypeScore=151.6736;InbreedingCoeff=0.6420;MQ=57.36;MQ0=12;MQRankSum=-6.984;QD=12.01;ReadPosRankSum=-5.046;VQSLOD=0.5478;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:0:0,0,0	1/1:11,0:11:9.03:210,9,0	0/0:32,0:14:3.01:0,3,54	./.	1/1:19,0:18:4.70:69,5,0	1/1:26,0:25:9.50:172,9,0	1/1:18,0:18:0.47:1,0,0	1/1:21,0:20:26.23:476,26,0	1/1:12,0:15:3.01:110,3,0	0/0:25,0:24:42.40:0,42,1161	0/0:8,0:8:12.03:0,12,253	1/1:7,4:10:3.01:85,3,0	0/0:25,0:24:33.11:0,33,891	1/1:5,0:10:5.05:115,5,0	0/1:20,7:25:0:0,0,0	1/1:6,0:10:3.01:86,3,0	0/0:21,0:20:36.07:0,36,904	0/0:11,0:11:12.04:0,12,355	1/1:20,0:19:22.84:464,23,0	1/1:20,0:19:2.99:24,3,0	0/0:13,0:13:3.01:0,3,62	./.	1/1:15,0:14:6.64:76,7,0	./.	0/0:22,0:22:47.33:0,47,1207	1/1:17,5:22:37.64:1132,38,0	1/1:19,0:17:6.02:178,6,0	1/1:4,0:6:8.98:250,9,0
chr10	100687144	.	C	CACACACAC	2823.92	PASS	AB=1.000;AC=33;AF=0.660;AN=50;BaseQRankSum=5.284;DP=496;FS=12.649;HRun=0;HaplotypeScore=143.8467;InbreedingCoeff=0.6783;MQ=54.40;MQ0=12;MQRankSum=-6.327;QD=9.74;ReadPosRankSum=-5.212;VQSLOD=-0.2715;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:0:0,0,0	1/1:5,6:12:9.02:204,9,0	0/0:31,0:13:3.01:0,3,54	./.	1/1:19,0:18:6.01:62,6,0	1/1:26,0:25:9.02:171,9,0	1/1:18,0:18:0.47:1,0,0	1/1:20,0:19:23.07:346,23,0	1/1:15,0:15:3.01:110,3,0	0/0:28,0:27:42.40:0,42,987	0/0:9,0:9:12.03:0,12,215	1/1:13,0:12:5.95:86,6,0	0/0:25,0:24:33.11:0,33,751	1/1:10,0:10:10.03:122,10,0	1/1:27,0:25:3.85:11,4,0	1/1:11,0:10:3.01:69,3,0	0/0:21,0:20:36.07:0,36,764	0/0:11,0:11:12.04:0,12,302	1/1:20,0:18:22.84:411,23,0	1/1:20,0:19:2.99:24,3,0	0/0:14,0:14:2.90:0,3,61	./.	1/1:19,0:17:12.57:101,13,0	./.	0/0:22,0:22:47.33:0,47,1027	1/1:21,0:21:37.64:930,38,0	1/1:19,0:17:6.02:141,6,0	1/1:6,0:6:8.98:204,9,0
chr10	100687646	.	T	TA	3028.20	PASS	AB=0.969;AC=18;AF=0.321;AN=56;BaseQRankSum=-10.767;DP=506;FS=1.916;HRun=7;HaplotypeScore=48.1266;InbreedingCoeff=0.8764;MQ=77.09;MQ0=0;MQRankSum=-0.400;QD=21.03;ReadPosRankSum=2.103;VQSLOD=3.0989;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:48.15:580,48,0	1/1:0,7:7:21.06:254,21,0	0/1:14,0:14:8.17:8,0,177	0/1:14,1:14:1.64:2,0,98	0/0:26,0:26:75.12:0,75,724	0/0:27,0:27:75.02:0,75,706	0/0:11,0:11:33.05:0,33,319	0/0:37,0:37:84.09:0,84,796	0/0:15,0:15:42.04:0,42,393	0/0:23,0:23:66.09:0,66,633	0/0:21,0:21:57.09:0,57,550	1/1:0,7:7:21.06:254,21,0	0/0:22,0:22:63.08:0,63,599	1/1:3,12:15:33.10:399,33,0	1/1:0,18:18:39.12:471,39,0	0/0:21,0:21:51.06:0,51,487	0/0:15,0:15:45.03:0,45,426	0/0:20,0:20:42.04:0,42,401	0/0:19,0:19:48.04:0,48,450	0/0:29,0:29:75.05:0,75,709	0/0:18,0:18:39.03:0,39,370	1/1:2,15:17:39.03:434,39,0	1/1:4,17:21:45.14:544,45,0	1/1:0,11:11:24.07:290,24,0	0/0:14,0:14:33.05:0,33,319	0/0:17,0:17:45.07:0,45,434	0/0:17,0:17:48.08:0,48,463	0/0:10,0:10:30.05:0,30,290
chr10	100687944	.	TTA	T	832.98	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.719;DP=586;FS=0.000;HRun=0;HaplotypeScore=65.3572;InbreedingCoeff=0.9962;MQ=81.18;MQ0=1;MQRankSum=-3.303;QD=32.04;ReadPosRankSum=2.305;VQSLOD=5.5962;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.25:0,72,1328	0/0:10,0:10:30.10:0,30,562	0/0:17,0:17:48.16:0,48,857	0/0:15,0:14:35.24:0,35,589	0/0:34,0:34:99:0,102,1807	0/0:25,0:25:75.26:0,75,1405	0/0:22,0:22:66.22:0,66,1215	0/0:49,0:49:99:0,147,2686	0/0:18,0:18:54.19:0,54,1005	0/0:25,0:25:72.24:0,72,1312	0/0:22,0:22:60.21:0,60,1113	0/0:9,0:9:27.09:0,27,494	0/0:17,0:17:51.17:0,51,955	0/0:16,0:16:48.16:0,48,893	0/0:9,0:9:27.09:0,27,505	0/0:15,0:15:45.15:0,45,843	0/0:15,0:15:45.15:0,45,835	1/1:2,24:25:63.21:928,63,0	0/0:20,0:20:57.19:0,57,1042	0/0:40,0:40:99:0,114,2079	0/0:17,0:17:48.12:0,48,835	0/0:16,0:16:45.13:0,45,808	0/0:20,0:20:60.21:0,60,1103	0/0:9,0:9:27.09:0,27,506	0/0:28,0:28:81.27:0,81,1468	0/0:24,0:24:69.22:0,69,1240	0/0:30,0:30:90.31:0,90,1677	0/0:14,0:14:42.14:0,42,786
chr10	100689308	.	GT	G	3733.85	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.597;DP=690;FS=2.023;HRun=9;HaplotypeScore=71.8153;InbreedingCoeff=0.9908;MQ=77.45;MQ0=0;MQRankSum=-2.685;QD=22.77;ReadPosRankSum=2.485;VQSLOD=4.6522;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,24:30:66.03:604,66,0	0/0:12,0:12:36.11:0,36,415	0/0:21,0:22:37.33:0,37,395	0/0:19,0:19:10.97:0,11,312	0/0:36,0:36:99:0,102,1148	0/0:34,0:34:84.25:0,84,970	0/0:21,0:21:60.18:0,60,692	0/0:35,0:35:87.24:0,87,986	0/0:28,0:28:70.86:0,71,858	0/0:28,0:29:84.07:0,84,941	0/0:21,0:21:60:0,60,664	1/1:2,21:23:60.03:549,60,0	0/0:31,0:31:84.24:0,84,957	1/1:2,29:31:78.04:714,78,0	0/0:20,0:21:53.99:0,54,603	0/0:13,0:13:36.11:0,36,415	0/0:20,0:20:54.15:0,54,615	0/0:18,0:18:48.14:0,48,553	0/0:20,0:20:20.97:0,21,477	0/0:34,0:34:93.27:0,93,1065	0/0:17,0:17:45.12:0,45,508	1/1:2,28:30:75.03:686,75,0	1/1:3,27:30:78.04:714,78,0	1/1:3,17:20:51.02:467,51,0	0/0:14,0:14:33.10:0,33,381	0/0:32,0:33:93.09:0,93,1041	0/0:40,0:40:99:0,105,1201	0/0:8,0:8:24.07:0,24,277
chr10	100691069	.	GA	G	2643.32	PASS	AB=0.713;AC=37;AF=0.661;AN=56;BaseQRankSum=5.614;DP=513;FS=4.682;HRun=14;HaplotypeScore=57.7227;InbreedingCoeff=0.5999;MQ=63.04;MQ0=8;MQRankSum=-1.224;QD=7.66;ReadPosRankSum=1.933;VQSLOD=2.6617;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,14:24:34.68:232,35,0	1/1:0,0:4:4.07:12,4,0	0/0:22,1:8:5.85:0,6,37	0/0:24,0:10:5.75:0,6,32	1/1:12,14:27:8.50:189,8,0	1/1:1,4:7:12.96:73,13,0	1/1:5,9:14:14.83:103,15,0	1/1:14,7:23:3.87:111,4,0	0/0:9,0:10:18.33:0,18,155	0/0:16,0:16:32.70:0,33,286	0/1:26,4:31:5.03:5,0,357	1/1:2,8:11:25.81:170,26,0	0/0:15,0:16:25.89:0,26,212	1/1:6,11:18:9.46:151,9,0	1/1:5,2:12:18.15:76,18,0	1/1:4,9:13:20.79:144,21,0	0/0:29,5:35:13.38:0,13,650	0/0:23,0:28:46.85:0,47,419	0/1:15,10:20:17.49:135,0,17	1/1:9,17:28:10.95:242,11,0	1/1:6,4:9:8.91:62,9,0	0/1:2,12:14:16.44:170,0,16	1/1:6,14:20:8.84:182,9,0	1/1:5,9:15:0.94:142,1,0	0/0:14,2:16:3.85:0,4,309	1/1:3,9:14:25.78:170,26,0	1/1:13,12:29:58.94:365,59,0	1/1:1,5:6:14.88:103,15,0
chr10	100691200	.	A	ATATC	5144.12	PASS	AB=0.794;AC=34;AF=0.607;AN=56;BaseQRankSum=4.932;DP=567;FS=7.680;HRun=0;HaplotypeScore=125.9907;InbreedingCoeff=0.8600;MQ=60.81;MQ0=7;MQRankSum=-1.552;QD=14.61;ReadPosRankSum=0.476;VQSLOD=4.0023;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:46.06:834,46,0	0/0:6,0:6:18.03:0,18,234	0/0:26,0:20:10.73:0,11,223	0/1:7,0:6:0.82:1,0,29	1/1:20,0:20:20.99:216,21,0	1/1:12,0:12:9.47:100,9,0	1/1:17,0:17:20.99:253,21,0	1/1:49,0:46:73.91:771,74,0	0/0:11,0:9:21.04:0,21,266	0/0:29,0:29:63.18:0,63,926	0/0:25,0:25:60.12:0,60,802	0/1:3,7:10:0:0,0,0	0/0:15,0:15:39.10:0,39,546	1/1:6,12:19:3.01:73,3,0	0/0:22,0:22:51.16:0,51,767	1/1:21,0:21:15.05:236,15,0	0/0:30,0:30:57.07:0,57,733	0/0:28,0:28:35.86:0,36,703	1/1:21,0:21:30.01:379,30,0	1/1:21,0:21:23.26:265,23,0	1/1:12,0:12:8.98:73,9,0	1/1:9,0:9:18.03:273,18,0	1/1:24,0:24:15.12:519,15,0	1/1:5,6:11:6.02:146,6,0	0/0:23,0:23:51.13:0,51,714	1/1:23,0:22:38.48:598,38,0	1/1:12,19:31:12.04:256,12,0	1/1:11,0:11:17.95:153,18,0
chr10	100691739	.	CA	C	6420.33	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=16.181;DP=527;FS=8.464;HRun=1;HaplotypeScore=119.0102;InbreedingCoeff=0.9609;MQ=84.90;MQ0=0;MQRankSum=-15.925;QD=40.13;ReadPosRankSum=0.197;VQSLOD=3.6526;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.31:0,90,1434	0/0:10,0:10:30.09:0,30,455	0/0:24,0:24:69.20:0,69,1025	0/0:18,0:18:53.85:0,54,766	0/0:20,0:20:60.19:0,60,919	1/1:0,31:31:93.31:1293,93,0	1/1:0,15:15:42.14:584,42,0	1/1:0,22:22:66.22:918,66,0	0/0:23,0:23:69.24:0,69,1097	0/0:24,0:24:69.22:0,69,1037	0/0:13,0:13:39.09:0,39,574	0/0:21,0:21:60.19:0,60,936	0/0:25,0:25:75.22:0,75,1151	0/0:19,0:19:57.17:0,57,856	0/0:29,0:29:87.30:0,87,1384	1/1:0,15:15:45.15:626,45,0	0/0:17,0:17:51.17:0,51,814	0/0:19,0:19:57.19:0,57,911	1/1:0,12:12:33.11:459,33,0	1/1:0,14:14:39.13:542,39,0	1/1:0,6:6:15.05:209,15,0	0/0:26,0:26:78.24:0,78,1199	0/0:20,0:20:60.20:0,60,956	0/0:24,0:24:72.23:0,72,1127	0/0:5,0:5:15.04:0,15,217	1/1:1,16:17:3.20:621,3,0	1/1:0,25:25:75.25:1042,75,0	1/1:0,3:3:9.03:126,9,0
chr10	100691750	.	T	TACAGA	8475.01	PASS	AB=0.750;AC=19;AF=0.339;AN=56;BaseQRankSum=16.129;DP=497;FS=7.191;HRun=0;HaplotypeScore=200.8360;InbreedingCoeff=0.8778;MQ=85.49;MQ0=0;MQRankSum=-15.633;QD=61.86;ReadPosRankSum=1.791;VQSLOD=5.2016;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:83.65:0,84,1909	0/0:10,0:10:30.10:0,30,697	0/0:20,0:20:47.43:0,47,770	0/0:19,0:19:46.97:0,47,831	0/0:19,0:19:54.17:0,54,1208	1/1:21,9:30:72.25:1902,72,0	1/1:9,4:13:33.10:803,33,0	1/1:19,0:19:36.92:632,37,0	0/0:25,0:25:75.26:0,75,1745	0/0:22,0:22:63.22:0,63,1468	0/0:15,0:15:45.10:0,45,953	0/0:18,0:18:51.16:0,51,1122	0/0:26,0:26:78.27:0,78,1750	0/0:20,0:20:60.19:0,60,1329	0/0:29,0:29:87.28:0,87,1960	1/1:4,9:13:39.09:976,39,0	0/0:15,0:15:45.09:0,45,908	0/0:20,0:20:57.18:0,57,1277	1/1:6,0:6:18.02:344,18,0	1/1:7,5:12:30.10:791,30,0	1/1:6,0:6:9.03:248,9,0	0/0:22,0:22:63.19:0,63,1357	0/0:22,0:22:66.11:0,66,1283	0/0:21,0:21:63.22:0,63,1466	0/0:5,0:5:12.04:0,12,279	0/1:10,5:15:24.75:1063,0,25	1/1:9,13:22:63.22:1635,63,0	1/1:0,1:1:3.01:81,3,0
chr10	100691753	.	A	ACGGGACTTTTCTT	8461.52	PASS	AB=0.545;AC=13;AF=0.260;AN=50;BaseQRankSum=11.161;DP=418;FS=1.916;HRun=0;HaplotypeScore=192.9418;InbreedingCoeff=0.8485;MQ=92.58;MQ0=0;MQRankSum=-10.216;QD=159.65;ReadPosRankSum=5.371;VQSLOD=5.6437;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,3628	0/0:10,0:10:30.10:0,30,1171	0/0:20,0:20:42.73:0,43,1246	0/0:19,0:19:47.01:0,47,1367	0/0:19,0:19:54.19:0,54,2147	1/1:0,9:9:27.09:1650,27,0	1/1:1,4:5:12.04:732,12,0	./.	0/0:27,0:27:78.25:0,78,3163	0/0:22,0:22:66.23:0,66,2669	0/0:15,0:15:45.15:0,45,1746	0/0:19,0:19:48.15:0,48,1833	0/0:26,0:26:78.25:0,78,3085	0/0:20,0:20:60.21:0,60,2399	0/0:30,0:30:90.31:0,90,3502	1/1:1,9:10:27.09:1653,27,0	0/0:12,0:12:36.12:0,36,1509	0/0:20,0:20:60.21:0,60,2318	./.	1/1:1,5:6:18.05:936,18,0	./.	0/0:20,0:20:57.20:0,57,2314	0/0:21,0:21:63.20:0,63,2285	0/0:22,0:22:63.22:0,63,2642	0/0:7,0:7:18.06:0,18,609	0/1:1,5:6:99:904,0,108	1/1:3,12:16:42.14:2402,42,0	1/1:0,1:1:3.01:184,3,0
chr10	100693881	.	GA	G	3233.06	PASS	AB=0.909;AC=17;AF=0.304;AN=56;BaseQRankSum=15.381;DP=591;FS=0.000;HRun=10;HaplotypeScore=79.8404;InbreedingCoeff=0.8799;MQ=73.32;MQ0=0;MQRankSum=-0.227;QD=19.02;ReadPosRankSum=3.288;VQSLOD=4.3207;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:21:50.98:443,51,0	1/1:2,6:8:14.99:130,15,0	0/0:17,1:17:7.68:0,8,297	0/1:9,0:10:20.97:21,0,30	0/0:23,0:23:57.13:0,57,614	0/0:25,0:25:69.18:0,69,756	0/0:21,0:22:38.07:0,38,581	0/0:24,2:27:4.86:0,5,479	0/0:17,0:17:48.13:0,48,531	0/0:21,0:21:54.15:0,54,597	0/0:25,1:27:51.99:0,52,785	1/1:4,15:19:44.98:391,45,0	0/0:24,0:24:66.17:0,66,723	1/1:1,26:27:77.98:677,78,0	1/1:4,24:28:56.97:495,57,0	0/0:16,0:16:36.08:0,36,389	0/0:32,0:33:87.07:0,87,943	0/0:13,1:14:16.06:0,16,403	0/0:39,0:39:96.22:0,96,1037	0/0:12,0:12:33.09:0,33,365	0/0:13,0:13:39.05:0,39,409	1/1:1,12:13:35.99:313,36,0	1/1:2,17:19:44.98:391,45,0	1/1:1,23:25:68.02:579,68,0	0/0:21,0:21:48.12:0,48,525	0/0:20,0:21:59.99:0,60,638	0/0:30,0:30:81.20:0,81,880	0/0:18,0:18:54.13:0,54,588
chr10	100694110	.	A	AC	6087.88	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-13.058;DP=618;FS=7.479;HRun=3;HaplotypeScore=63.8116;InbreedingCoeff=0.9998;MQ=85.98;MQ0=0;MQRankSum=-1.056;QD=35.19;ReadPosRankSum=2.087;VQSLOD=5.4685;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:90.30:1260,90,0	1/1:0,10:10:27.09:377,27,0	0/0:27,0:27:67.91:0,68,758	0/0:18,0:18:42.04:0,42,461	0/0:18,0:18:45.14:0,45,540	0/0:27,0:27:75.23:0,75,900	0/0:26,0:26:78.24:0,78,935	0/0:23,0:23:66.19:0,66,782	0/0:22,0:22:63.19:0,63,756	0/0:18,0:18:54.14:0,54,617	0/0:19,0:19:48.15:0,48,576	1/1:2,19:21:51.17:714,51,0	0/0:24,0:24:60.27:0,60,793	1/1:3,25:28:66.22:924,66,0	1/1:4,18:22:54.18:756,54,0	0/0:14,0:14:42.13:0,42,504	0/0:31,0:31:87.27:0,87,1043	0/0:22,0:22:66.17:0,66,776	0/0:21,0:21:57.17:0,57,682	0/0:22,0:22:57.17:0,57,683	0/0:30,0:30:90.28:0,90,1079	1/1:0,22:22:51.17:713,51,0	1/1:1,15:16:36.12:504,36,0	1/1:0,22:22:60.20:839,60,0	0/0:20,0:20:51.16:0,51,612	0/0:21,0:21:54.16:0,54,648	0/0:21,0:21:54.15:0,54,636	0/0:21,0:21:63.19:0,63,754
chr10	100694363	.	TTCTCTCTCTCTCTCTC	T	132.52	PASS	AB=0.976;AC=5;AF=0.093;AN=54;BaseQRankSum=1.552;DP=589;FS=4.417;HRun=0;HaplotypeScore=231.1718;InbreedingCoeff=0.3087;MQ=70.04;MQ0=16;MQRankSum=0.799;QD=1.98;ReadPosRankSum=-0.293;VQSLOD=2.5749;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:84.27:84,0,115	0/0:9,0:12:6.02:0,6,155	./.	0/0:45,0:22:0:0,0,0	0/0:20,0:20:15.02:0,15,227	0/0:21,0:21:18.03:0,18,248	0/0:21,0:19:11.98:0,12,109	0/0:42,0:42:17.06:0,17,121	0/0:13,0:16:12.02:0,12,176	0/0:18,0:18:21.45:0,21,218	0/0:16,0:18:21.01:0,21,295	0/1:12,1:13:11.51:92,0,12	0/0:21,0:21:21.06:0,21,395	0/0:15,0:14:8.98:0,9,95	0/0:21,0:21:23.98:0,24,320	0/0:16,0:16:14.78:0,15,216	0/0:20,0:20:14.10:0,14,134	0/0:15,0:13:15.02:0,15,308	0/0:26,0:25:14.75:0,15,109	0/0:26,0:26:15.48:0,15,174	0/0:25,0:22:5.97:0,6,45	1/1:13,3:16:3.01:37,3,0	0/1:15,0:14:1.38:29,0,1	0/0:13,10:23:5.81:0,6,39	0/0:13,0:14:23.18:0,23,212	0/0:20,0:20:18.05:0,18,276	0/0:14,0:14:21:0,21,341	0/0:11,0:9:12:0,12,116
chr10	100694740	.	C	CA	7482.29	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=18.456;DP=745;FS=4.023;HRun=6;HaplotypeScore=89.6459;InbreedingCoeff=0.9937;MQ=72.04;MQ0=0;MQRankSum=-0.269;QD=33.40;ReadPosRankSum=1.110;VQSLOD=4.6602;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,34:40:96.09:1154,96,0	1/1:1,18:19:54.17:673,54,0	0/0:15,0:15:27.03:0,27,266	0/0:9,0:9:11.94:0,12,101	0/0:37,0:37:99:0,105,1070	0/0:31,0:31:81.16:0,81,815	0/0:26,0:26:60.09:0,60,597	0/0:25,0:25:75.14:0,75,749	0/0:23,0:23:66.13:0,66,665	0/0:33,0:33:96.21:0,96,975	0/0:24,0:24:60.13:0,60,612	1/1:0,23:23:63.20:786,63,0	0/0:29,0:29:75.10:0,75,746	1/1:3,28:31:87.20:1050,87,0	1/1:2,20:22:49.22:736,49,0	0/0:23,0:23:69.14:0,69,697	0/0:22,0:22:60.12:0,60,603	0/0:18,1:19:19.79:0,20,513	0/0:25,0:25:66.11:0,66,656	0/0:24,0:24:69.15:0,69,702	0/0:35,0:35:93.16:0,93,928	1/1:1,37:38:99:1348,108,0	1/1:1,21:22:63.17:766,63,0	1/1:1,28:29:78.25:969,78,0	0/0:29,0:29:84.19:0,84,857	0/0:27,0:27:75.17:0,75,765	0/0:39,0:38:99:0,102,1040	0/0:26,0:26:72.12:0,72,724
chr10	100694830	.	T	TACACACACACACACAC	5513.66	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-1.626;DP=746;FS=14.224;HRun=0;HaplotypeScore=319.5420;InbreedingCoeff=0.9478;MQ=58.38;MQ0=9;MQRankSum=-4.403;QD=25.89;ReadPosRankSum=-2.077;VQSLOD=1.4153;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,1:36:17.99:477,18,0	1/1:10,0:11:12.04:335,12,0	0/0:36,0:17:22.61:0,23,544	0/0:22,0:19:19.10:0,19,441	0/0:18,0:21:48.16:0,48,1800	0/0:20,0:21:60.18:0,60,2161	0/0:33,0:35:84.27:0,84,3316	0/0:26,0:26:26.73:0,27,844	0/0:27,0:27:69.24:0,69,2829	0/0:28,0:27:45.15:0,45,1911	0/0:13,0:13:33.10:0,33,1360	1/1:20,5:27:37.63:1755,38,0	0/0:28,0:28:53.97:0,54,2201	1/1:27,4:30:12.04:397,12,0	1/1:24,0:21:3.01:64,3,0	0/0:27,0:29:66.23:0,66,2581	0/0:39,0:39:93.32:0,93,3893	0/0:27,0:28:69.16:0,69,2532	0/0:17,0:14:21.05:0,21,590	0/0:23,0:23:54.17:0,54,1917	0/0:46,0:49:99:0,117,4686	1/1:25,4:28:14.94:736,15,0	1/1:23,3:29:20.32:686,20,0	1/1:18,1:21:16.75:1062,17,0	0/0:25,0:25:66.19:0,66,2473	0/0:26,0:30:76.81:0,77,3031	0/0:27,0:28:63.20:0,63,2367	0/0:6,0:6:15.05:0,15,596
chr10	100696590	.	TTCTCTCTCTCTC	T	989.25	PASS	AB=0.797;AC=11;AF=0.204;AN=54;BaseQRankSum=3.698;DP=657;FS=8.616;HRun=0;HaplotypeScore=196.6627;InbreedingCoeff=0.3363;MQ=49.71;MQ0=28;MQRankSum=-1.974;QD=6.47;ReadPosRankSum=0.071;VQSLOD=1.8779;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,23:34:0:0,0,0	./.	0/0:23,0:13:0:0,0,0	0/0:32,0:18:2.99:0,3,24	0/0:26,0:25:30.99:0,31,1194	0/0:7,1:22:2.04:0,2,6	0/1:9,0:15:8.09:26,0,8	0/0:39,0:38:49.98:0,50,1052	0/0:29,0:28:45.09:0,45,1730	0/0:33,0:36:78.26:0,78,2992	0/0:21,0:20:33.58:0,34,1408	1/1:15,7:22:6.49:200,6,0	0/0:21,0:21:27.09:0,27,1091	1/1:10,7:19:5.67:179,6,0	0/1:21,0:23:9.94:205,0,10	0/0:11,0:19:2.95:0,3,25	0/0:25,0:22:39.12:0,39,1363	0/0:22,0:21:21.12:0,21,1714	0/1:10,0:16:99:180,0,124	0/0:11,0:27:8.80:0,9,88	0/0:28,0:21:33.11:0,33,819	0/0:8,16:24:0:0,0,0	1/1:7,7:13:8.59:239,9,0	0/1:18,0:17:2.67:3,0,70	0/0:16,0:15:15.05:0,15,665	0/0:10,0:25:55.38:0,55,1428	0/1:12,0:22:95.77:96,0,110	0/0:20,0:18:39.13:0,39,1098
chr10	100696612	.	CTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTG	C	1802.74	PASS	AB=0.916;AC=11;AF=0.204;AN=54;BaseQRankSum=4.697;DP=609;FS=13.729;HRun=0;HaplotypeScore=344.7718;InbreedingCoeff=0.3416;MQ=43.18;MQ0=32;MQRankSum=-2.697;QD=11.13;ReadPosRankSum=-1.051;VQSLOD=0.7911;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:0:0,0,0	0/0:9,0:9:3.01:0,3,256	./.	0/0:1,0:1:2.99:0,3,23	0/0:22,0:20:33.11:0,33,1547	0/0:27,0:25:18.03:0,18,1377	0/1:28,0:23:20.84:21,0,454	0/0:36,0:34:89.14:0,89,1450	0/0:26,0:24:44.92:0,45,2723	0/0:32,0:32:90.28:0,90,4969	0/0:20,0:19:39.60:0,40,2753	1/1:21,0:21:21.07:947,21,0	0/0:20,0:19:45.02:0,45,2523	1/1:21,0:21:8.60:333,9,0	0/1:20,0:20:99:187,0,1527	0/0:22,0:20:13.38:0,13,879	0/0:23,0:20:56.39:0,56,3162	0/0:24,0:21:29.26:0,29,3393	0/1:17,0:16:42.50:42,0,1307	0/0:28,0:27:23.86:0,24,1453	0/0:31,0:21:42.14:0,42,2547	0/0:22,0:22:0:0,0,0	1/1:17,0:16:8.59:239,9,0	0/1:5,13:17:99:160,0,262	0/0:18,0:17:24.08:0,24,1699	0/0:30,0:30:88.49:0,88,4514	0/1:20,0:19:26.16:26,0,1333	0/0:20,0:18:51.17:0,51,2878
chr10	100696624	.	CTGTGTGTGTGTGTGTGTGTG	C	914.92	PASS	AB=1.000;AC=5;AF=0.096;AN=52;BaseQRankSum=4.957;DP=600;FS=1.636;HRun=0;HaplotypeScore=248.2447;InbreedingCoeff=0.5455;MQ=42.56;MQ0=34;MQRankSum=-4.116;QD=17.26;ReadPosRankSum=-1.162;VQSLOD=2.4488;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:0:0,0,0	0/0:8,0:8:3.01:0,3,242	./.	./.	0/0:22,0:20:9.03:0,9,673	0/0:28,0:26:18.53:0,19,1479	0/0:31,0:26:8.12:0,8,658	0/0:38,0:36:39.91:0,40,1045	0/0:27,0:25:20.23:0,20,1594	0/0:30,0:30:48.16:0,48,3134	0/0:21,0:20:24.08:0,24,1907	1/1:11,8:19:15.05:727,15,0	0/0:19,0:18:27.09:0,27,1629	1/1:13,4:17:2.67:147,3,0	0/0:17,0:17:18.06:0,18,1377	0/0:21,0:19:15.94:0,16,1238	0/0:25,0:21:34.92:0,35,1992	0/0:30,0:26:47.75:0,48,2546	0/0:15,0:14:20.04:0,20,825	0/0:28,0:27:17.09:0,17,1230	0/0:32,0:23:21.07:0,21,1737	0/0:21,1:21:0:0,0,0	0/0:10,4:13:0:0,0,0	0/1:17,0:16:99:151,0,172	0/0:19,0:17:12.04:0,12,919	0/0:32,0:32:46.97:0,47,3131	0/0:16,0:14:15.05:0,15,919	0/0:17,0:15:21.07:0,21,1563
chr10	100700303	.	GCT	G	1264.59	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.875;DP=608;FS=0.693;HRun=0;HaplotypeScore=76.9595;InbreedingCoeff=0.9917;MQ=90.04;MQ0=0;MQRankSum=-2.649;QD=42.15;ReadPosRankSum=1.423;VQSLOD=5.4747;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,2462	1/1:1,9:11:33.11:507,33,0	0/0:26,0:26:72.23:0,72,1381	0/0:25,0:24:62.50:0,62,1236	0/0:26,0:26:78.27:0,78,1583	0/0:16,0:16:48.16:0,48,973	0/0:31,0:31:93.32:0,93,1872	0/0:26,0:26:75.25:0,75,1470	0/0:21,0:21:60.21:0,60,1199	0/0:18,0:18:54.19:0,54,1093	0/0:20,0:20:60.21:0,60,1219	0/0:17,0:17:48.15:0,48,935	0/0:27,0:27:81.23:0,81,1570	0/0:20,0:20:60.21:0,60,1217	1/1:0,19:19:54.18:879,54,0	0/0:15,0:15:45.15:0,45,912	0/0:20,0:20:60.21:0,60,1218	0/0:22,0:22:66.20:0,66,1303	0/0:22,0:22:66.22:0,66,1288	0/0:31,0:31:93.32:0,93,1857	0/0:32,0:32:96.32:0,96,1912	0/0:16,0:16:48.16:0,48,970	0/0:23,0:23:69.24:0,69,1371	0/0:25,0:25:75.26:0,75,1471	0/0:17,0:17:51.17:0,51,1001	0/0:22,0:22:63.21:0,63,1227	0/0:14,0:14:42.13:0,42,815	0/0:5,0:5:15.05:0,15,305
chr10	100700387	.	TA	T	636.08	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.725;DP=586;FS=0.000;HRun=8;HaplotypeScore=66.9564;InbreedingCoeff=0.9984;MQ=80.98;MQ0=0;MQRankSum=-4.548;QD=20.52;ReadPosRankSum=-0.588;VQSLOD=3.1644;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.24:0,78,942	1/1:2,10:12:29.90:270,30,0	0/0:15,0:15:29.67:0,30,319	0/0:15,0:15:32.98:0,33,342	0/0:30,0:30:90.25:0,90,1065	0/0:20,0:20:51.15:0,51,606	0/0:22,0:22:66.18:0,66,778	0/0:30,0:30:80.41:0,80,938	0/0:27,0:27:78.22:0,78,922	0/0:21,0:21:60.18:0,60,716	0/0:16,0:16:48.15:0,48,580	0/0:23,0:23:60.16:0,60,704	0/0:20,0:20:54.15:0,54,640	0/0:19,0:19:51.13:0,51,594	1/1:2,17:19:53.81:487,54,0	0/0:19,0:19:51.16:0,51,616	0/0:24,0:24:66.20:0,66,797	0/0:11,0:11:27.07:0,27,314	0/0:18,0:18:51.10:0,51,571	0/0:43,0:43:99:0,120,1422	0/0:12,0:12:36.11:0,36,435	0/0:17,0:17:42.11:0,42,487	0/0:24,0:24:66.20:0,66,797	0/0:20,0:20:54.17:0,54,652	0/0:16,0:16:39.12:0,39,471	0/0:26,0:26:75.22:0,75,897	0/0:29,0:29:84.22:0,84,979	0/0:10,0:10:30.07:0,30,349
chr10	100700570	.	TA	T	806.65	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.209;DP=486;FS=1.654;HRun=3;HaplotypeScore=49.2676;InbreedingCoeff=0.9859;MQ=83.00;MQ0=0;MQRankSum=-2.804;QD=28.81;ReadPosRankSum=1.903;VQSLOD=2.8912;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.16:0,51,715	1/1:0,10:10:30.09:371,30,0	0/0:21,0:21:32.48:0,32,734	0/0:8,0:8:15.05:0,15,206	0/0:22,0:22:66.15:0,66,872	0/0:24,0:24:63.20:0,63,887	0/0:14,0:14:42.14:0,42,604	0/0:55,0:55:99:0,159,2192	0/0:14,0:14:42.10:0,42,581	0/0:14,0:14:42.13:0,42,588	0/0:11,0:11:33.08:0,33,453	0/0:14,0:14:42.13:0,42,588	0/0:18,0:18:54.17:0,54,761	0/0:12,0:12:36.12:0,36,518	1/1:1,17:18:45.14:557,45,0	0/0:21,0:21:60.17:0,60,826	0/0:11,0:11:30.08:0,30,431	0/0:10,0:10:30.10:0,30,432	0/0:22,0:22:60.17:0,60,826	0/0:11,0:11:30.10:0,30,431	0/0:26,0:26:75.24:0,75,1055	0/0:10,0:10:30.08:0,30,396	0/0:17,0:17:51.17:0,51,734	0/0:13,0:13:36.12:0,36,518	0/0:13,0:13:33.11:0,33,473	0/0:25,0:25:72.22:0,72,987	0/0:27,0:27:81.22:0,81,1095	0/0:8,0:8:18.06:0,18,258
chr10	100700832	.	AATATATATATGTTATATAT	A	369.65	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=2.458;DP=215;FS=0.000;HRun=0;HaplotypeScore=101.0523;InbreedingCoeff=0.3638;MQ=82.08;MQ0=3;MQRankSum=-3.157;QD=20.54;ReadPosRankSum=0.486;VQSLOD=1.6990;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:12.04:0,12,397	1/1:5,3:8:6.02:309,6,0	0/0:11,0:8:2.80:0,3,13	0/0:12,0:6:2.13:0,2,48	0/0:4,0:4:9.01:0,9,544	0/0:5,0:5:5.81:0,6,174	0/0:2,0:2:3.01:0,3,235	0/0:30,0:30:75.25:0,75,4321	0/0:8,0:8:18.06:0,18,1099	0/0:8,0:8:15.05:0,15,761	0/0:5,0:5:9.03:0,9,376	0/0:4,0:4:3.01:0,3,127	0/0:5,0:5:6:0,6,115	0/0:2,0:2:6.02:0,6,171	1/1:6,1:7:3.01:156,3,0	0/0:3,0:3:9:0,9,310	0/0:17,0:17:39.12:0,39,2947	0/0:17,0:16:48.16:0,48,3513	0/0:11,0:10:27.09:0,27,1773	0/0:5,0:5:6.02:0,6,272	0/0:3,0:3:9.03:0,9,762	0/1:3,0:3:0:0,0,0	0/0:4,0:4:3.01:0,3,125	0/0:2,0:2:2.90:0,3,16	0/0:5,0:5:12.04:0,12,954	0/0:9,0:9:18.06:0,18,757	0/0:7,0:7:15.05:0,15,1121	0/0:6,0:6:15.05:0,15,731
chr10	100700858	.	ATATATATGTGTG	A	501.83	PASS	AB=1.000;AC=16;AF=0.320;AN=50;BaseQRankSum=3.809;DP=169;FS=2.378;HRun=0;HaplotypeScore=58.5814;InbreedingCoeff=0.4372;MQ=55.92;MQ0=7;MQRankSum=-1.877;QD=9.84;ReadPosRankSum=-1.097;VQSLOD=1.4184;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,6:9:3.48:71,3,0	1/1:8,0:8:6.02:123,6,0	./.	0/0:9,0:2:2.74:0,3,19	0/0:7,0:7:15.05:0,15,467	0/0:6,0:6:11.51:0,12,134	0/0:1,0:1:3.01:0,3,50	0/0:21,0:20:54.01:0,54,1042	0/0:5,0:5:15.02:0,15,437	0/0:3,0:3:9.03:0,9,205	0/0:1,0:1:3.01:0,3,75	1/1:1,0:1:2.92:17,3,0	./.	1/1:1,0:1:3.01:64,3,0	1/1:5,0:5:9.02:182,9,0	0/0:1,0:1:3.01:0,3,75	0/0:15,0:15:42.14:0,42,1170	0/0:20,0:19:56.92:0,57,1865	0/1:10,0:9:22.79:23,0,392	0/0:3,0:3:3.01:0,3,89	0/1:11,0:11:63.18:63,0,412	1/1:0,1:1:3.01:70,3,0	1/1:3,0:2:3.01:39,3,0	./.	0/0:5,0:4:12.01:0,12,305	0/0:5,0:5:14.06:0,14,290	0/0:6,0:6:15.05:0,15,365	0/0:5,0:5:6.49:0,6,137
chr10	100700864	.	ATGTG	A	780.64	PASS	AB=0.900;AC=21;AF=0.618;AN=34;BaseQRankSum=1.272;DP=167;FS=11.823;HRun=0;HaplotypeScore=39.1321;InbreedingCoeff=0.4467;MQ=51.86;MQ0=11;MQRankSum=1.392;QD=8.87;ReadPosRankSum=-0.811;VQSLOD=0.1421;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:9:3.48:34,3,0	1/1:5,0:8:3:26,3,0	./.	./.	0/0:6,0:6:9.02:0,9,108	1/1:4,1:6:12.03:163,12,0	./.	0/0:19,0:17:0:0,0,0	0/0:0,0:3:8.23:0,8,37	0/0:4,0:4:6.12:0,6,54	./.	./.	./.	./.	1/1:2,0:5:9.02:92,9,0	./.	0/1:16,2:18:99:125,0,100	0/0:19,0:18:24.08:0,24,459	1/1:8,3:10:9.03:127,9,0	1/1:2,2:4:3.01:47,3,0	1/1:12,0:12:12.04:170,12,0	1/1:2,0:2:3.89:35,4,0	./.	./.	0/0:5,0:3:3.01:0,3,50	1/1:6,0:6:0.58:41,1,0	./.	1/1:5,0:4:2.95:46,3,0
chr10	100700963	.	TCATATATATA	T	387.34	PASS	AC=4;AF=0.083;AN=48;BaseQRankSum=3.871;DP=173;FS=1.713;HRun=0;HaplotypeScore=55.0620;InbreedingCoeff=0.5466;MQ=75.24;MQ0=0;MQRankSum=-4.120;QD=38.73;ReadPosRankSum=1.435;VQSLOD=3.2228;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:6.02:0,6,209	1/1:2,3:5:11.97:301,12,0	0/0:6,0:3:6.02:0,6,81	0/0:7,0:7:10.58:0,11,207	0/0:4,0:4:12.04:0,12,536	0/0:9,0:9:24.08:0,24,1173	./.	0/0:23,0:24:42.12:0,42,1394	0/0:9,0:9:27.08:0,27,1179	0/0:2,0:2:6.02:0,6,279	0/0:5,0:5:15.05:0,15,771	./.	0/0:1,0:1:3.01:0,3,155	0/0:1,0:1:3.01:0,3,137	1/1:0,5:5:6.02:189,6,0	0/0:6,0:6:18.06:0,18,853	0/0:11,0:11:33.11:0,33,1699	0/0:13,0:13:30.08:0,30,1375	0/0:7,0:7:18.06:0,18,758	0/0:2,0:2:6.02:0,6,309	0/0:14,0:14:39.11:0,39,1651	0/0:1,0:1:3.01:0,3,71	./.	./.	0/0:10,0:10:27.08:0,27,1150	0/0:5,0:5:15.05:0,15,773	0/0:8,0:8:21.07:0,21,1082	0/0:11,0:11:33.11:0,33,1700
chr10	100701571	.	A	AG	3681.48	PASS	AB=0.721;AC=18;AF=0.321;AN=56;BaseQRankSum=6.808;DP=566;FS=7.902;HRun=9;HaplotypeScore=98.3535;InbreedingCoeff=0.6382;MQ=83.46;MQ0=0;MQRankSum=-2.989;QD=16.36;ReadPosRankSum=-0.849;VQSLOD=3.0292;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:19,13:32:12.97:315,0,13	0/1:4,4:8:11:109,0,11	0/0:33,0:32:5.85:0,6,330	0/0:26,0:26:42.33:0,42,326	0/0:22,0:22:59.95:0,60,518	0/0:26,0:26:34.57:0,35,467	0/0:20,0:20:50.96:0,51,439	0/0:20,1:22:43.92:0,44,362	0/0:19,0:19:41.98:0,42,364	1/1:10,20:30:34.02:579,34,0	1/1:6,19:25:45.04:481,45,0	1/1:7,6:13:1.01:215,1,0	0/0:15,0:15:32.72:0,33,272	1/1:9,8:17:24.01:244,24,0	1/1:4,17:21:48.06:503,48,0	0/0:23,0:23:68.98:0,69,596	0/0:20,0:20:50.98:0,51,443	0/0:13,1:14:8.81:0,9,305	0/0:13,0:13:20.97:0,21,180	0/0:20,0:20:41.98:0,42,364	0/0:33,0:33:77.95:0,78,673	1/1:4,12:16:36.10:397,36,0	0/1:8,15:23:3.83:402,0,4	1/1:10,12:22:39.06:415,39,0	0/0:17,0:16:35.98:0,36,313	0/1:16,2:18:21.38:21,0,290	0/0:14,0:14:32.97:0,33,283	0/0:3,0:3:9:0,9,78
chr10	100701602	.	G	GAGAC	6215.23	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-2.877;DP=615;FS=3.865;HRun=0;HaplotypeScore=134.1411;InbreedingCoeff=0.9847;MQ=73.32;MQ0=1;MQRankSum=-5.759;QD=37.67;ReadPosRankSum=1.014;VQSLOD=5.1839;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,26:35:69.24:1700,69,0	1/1:9,0:9:8.60:73,9,0	0/0:34,0:28:23.03:0,23,628	0/0:41,0:35:32.76:0,33,733	0/0:19,0:19:42.11:0,42,647	0/0:20,0:20:36.11:0,36,571	0/0:21,0:21:45.12:0,45,698	0/0:30,0:30:60.18:0,60,927	0/0:24,0:24:63.10:0,63,968	0/0:19,0:19:39.13:0,39,628	0/0:18,0:18:20.94:0,21,349	1/1:2,9:13:33.11:811,33,0	0/0:23,0:23:50.84:0,51,809	1/1:3,9:13:24.08:591,24,0	1/1:29,0:31:33.88:389,34,0	0/0:27,0:27:69.22:0,69,1123	0/0:24,0:24:60.14:0,60,919	0/0:19,0:19:39.13:0,39,642	0/0:20,0:20:33.06:0,33,452	0/0:22,0:22:57.15:0,57,892	0/0:24,0:24:57.13:0,57,892	1/1:5,13:19:30.10:735,30,0	1/1:3,10:18:27.08:661,27,0	1/1:5,19:27:51.18:1256,51,0	0/0:16,0:16:36.11:0,36,570	0/0:24,0:24:48.16:0,48,774	0/0:20,0:20:57.19:0,57,949	0/0:5,0:5:15.05:0,15,250
chr10	100701700	.	ATAT	A	1042.14	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.930;DP=592;FS=2.874;HRun=0;HaplotypeScore=87.3106;InbreedingCoeff=0.9961;MQ=91.57;MQ0=0;MQRankSum=-7.720;QD=38.60;ReadPosRankSum=2.306;VQSLOD=4.7627;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,2428	1/1:1,8:9:21.07:370,21,0	0/0:26,0:26:78.23:0,78,1727	0/0:25,0:25:75.26:0,75,1763	0/0:23,0:23:66.23:0,66,1601	0/0:27,0:27:81.28:0,81,1966	0/0:25,0:25:75.26:0,75,1838	0/0:40,0:40:99:0,120,2793	0/0:14,0:14:39.12:0,39,907	0/0:26,0:26:78.27:0,78,1920	0/0:29,0:29:84.29:0,84,2065	0/0:9,0:9:27.09:0,27,665	0/0:16,0:16:48.16:0,48,1174	0/0:21,0:21:63.22:0,63,1546	1/1:0,18:18:45.15:793,45,0	0/0:17,0:17:51.18:0,51,1247	0/0:26,0:26:78.24:0,78,1827	0/0:9,0:9:27.09:0,27,666	0/0:11,0:11:33.11:0,33,804	0/0:30,0:30:90.31:0,90,2207	0/0:18,0:18:54.17:0,54,1282	0/0:22,0:22:60.21:0,60,1448	0/0:14,0:14:42.14:0,42,1009	0/0:26,0:26:69.24:0,69,1629	0/0:21,0:21:63.22:0,63,1521	0/0:24,0:24:72.25:0,72,1696	0/0:23,0:23:69.24:0,69,1670	0/0:10,0:10:27.09:0,27,665
chr10	100702045	.	GT	G	956.43	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.671;DP=637;FS=0.712;HRun=3;HaplotypeScore=63.0143;InbreedingCoeff=0.9976;MQ=93.63;MQ0=0;MQRankSum=-4.265;QD=30.85;ReadPosRankSum=2.670;VQSLOD=3.5605;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1402	1/1:0,12:12:33.10:409,33,0	0/0:34,0:34:99:0,99,1403	0/0:27,0:27:75.25:0,75,1046	0/0:23,0:23:66.18:0,66,927	0/0:32,0:32:93.31:0,93,1338	0/0:12,0:12:36.12:0,36,518	0/0:33,0:33:87.29:0,87,1249	0/0:30,0:30:87.29:0,87,1249	0/0:22,0:22:66.22:0,66,932	0/0:26,0:26:75.22:0,75,1039	0/0:12,0:12:36.12:0,36,514	0/0:27,0:27:78.26:0,78,1116	0/0:25,0:25:75.25:0,75,1079	1/1:1,18:19:54.17:669,54,0	0/0:20,0:20:60.20:0,60,864	0/0:16,0:16:48.16:0,48,691	0/0:14,0:14:39.13:0,39,562	0/0:20,0:20:54.16:0,54,744	0/0:31,0:31:90.26:0,90,1256	0/0:21,0:21:63.20:0,63,889	0/0:22,0:22:63.21:0,63,906	0/0:22,0:22:63.11:0,63,863	0/0:16,0:16:45.10:0,45,620	0/0:27,0:27:78.26:0,78,1123	0/0:27,0:27:78.26:0,78,1108	0/0:23,0:23:66.22:0,66,950	0/0:8,0:8:21.07:0,21,302
chr10	100702455	.	AG	A	1339.10	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.102;DP=658;FS=0.614;HRun=2;HaplotypeScore=86.9369;InbreedingCoeff=0.9936;MQ=86.81;MQ0=0;MQRankSum=-5.855;QD=33.48;ReadPosRankSum=1.310;VQSLOD=3.7922;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,1868	1/1:0,7:7:21.03:253,21,0	0/0:24,0:24:69.21:0,69,993	0/0:27,0:27:69.10:0,69,974	0/0:26,0:26:69.18:0,69,988	0/0:15,0:15:42.14:0,42,630	0/0:16,0:16:45.15:0,45,674	0/0:28,0:28:84.27:0,84,1223	0/0:20,0:20:54.18:0,54,807	0/0:27,0:27:78.25:0,78,1148	0/0:26,0:26:57.15:0,57,828	0/0:20,0:20:57.19:0,57,854	0/0:30,0:30:90.29:0,90,1328	0/0:18,0:18:51.17:0,51,764	1/1:1,32:33:93.30:1206,93,0	0/0:19,0:19:57.19:0,57,854	0/0:25,0:25:75.24:0,75,1103	0/0:6,0:6:18.06:0,18,258	0/0:13,0:13:36.10:0,36,518	0/0:38,0:38:99:0,111,1627	0/0:19,0:19:57.19:0,57,854	0/0:34,0:34:78.25:0,78,1148	0/0:19,0:19:42.10:0,42,597	0/0:24,0:24:69.23:0,69,1034	0/0:23,0:23:66.12:0,66,916	0/0:34,0:34:99:0,102,1510	0/0:26,0:26:72.24:0,72,1076	0/0:18,0:18:48.16:0,48,719
chr10	100702514	.	A	AG	8720.13	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=0.964;DP=682;FS=17.241;HRun=0;HaplotypeScore=78.0443;InbreedingCoeff=0.9985;MQ=80.65;MQ0=0;MQRankSum=-1.979;QD=43.82;ReadPosRankSum=2.461;VQSLOD=3.2525;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,46:47:99:1970,126,0	1/1:1,6:7:18.06:287,18,0	0/0:22,0:22:66.17:0,66,878	0/0:25,0:25:63.20:0,63,856	0/0:24,0:24:72.23:0,72,991	0/0:20,0:20:57.17:0,57,763	0/0:26,0:26:78.22:0,78,1067	0/0:28,0:28:81.26:0,81,1117	0/0:22,0:22:66.22:0,66,922	0/0:27,0:27:81.27:0,81,1119	0/0:25,0:25:72.17:0,72,963	1/1:0,20:20:60.20:956,60,0	0/0:34,0:34:99:0,99,1365	1/1:0,16:16:45.15:718,45,0	1/1:1,28:29:84.29:1328,84,0	0/0:12,0:12:36.12:0,36,503	0/0:25,0:25:75.21:0,75,1011	0/0:10,0:10:27.09:0,27,377	0/0:16,0:16:42.12:0,42,568	0/0:28,0:28:84.25:0,84,1153	0/0:27,0:27:78.23:0,78,1055	1/1:0,23:23:66.14:1021,66,0	1/1:0,24:24:66.23:1051,66,0	1/1:1,32:33:87.30:1389,87,0	0/0:19,0:19:57.16:0,57,776	0/0:41,0:41:99:0,123,1719	0/0:34,0:34:99:0,102,1407	0/0:18,0:18:54.18:0,54,755
chr10	100704561	.	C	CAA	854.37	PASS	AB=0.972;AC=14;AF=0.269;AN=52;BaseQRankSum=-1.816;DP=383;FS=9.550;HRun=14;HaplotypeScore=59.2114;InbreedingCoeff=0.6822;MQ=67.00;MQ0=0;MQRankSum=0.917;QD=9.19;ReadPosRankSum=-3.848;VQSLOD=0.0282;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,14:22:29.45:349,29,0	./.	0/0:11,0:8:2.61:0,3,25	0/0:13,0:7:1.60:0,2,9	0/0:27,0:30:49.97:0,50,396	0/1:16,0:17:4.13:4,0,149	0/0:9,0:9:5.74:0,6,50	0/0:19,0:22:6.24:0,6,174	0/0:13,0:12:17.75:0,18,147	0/0:11,0:14:8.33:0,8,103	0/0:18,0:20:25.95:0,26,253	1/1:10,3:13:32.89:302,33,0	0/0:12,0:13:8.36:0,8,73	1/1:0,6:6:6.02:79,6,0	./.	0/0:4,0:5:8.59:0,9,62	0/0:19,0:21:28.66:0,29,210	0/0:12,0:14:21.21:0,21,159	0/0:8,0:10:8.20:0,8,139	0/0:29,0:32:32.17:0,32,341	0/1:5,0:5:0:0,0,0	1/1:1,7:8:14.90:136,15,0	1/1:4,11:17:8.39:87,8,0	1/1:4,1:5:5.98:59,6,0	0/0:17,0:18:9.72:0,10,194	0/0:16,0:16:20.59:0,21,175	0/0:14,0:15:29.43:0,29,228	0/0:11,0:13:20.49:0,20,199
chr10	100709057	.	GTATCTCTCTCTCTCTC	G	377.65	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.753;DP=530;FS=16.229;HRun=0;HaplotypeScore=210.7222;InbreedingCoeff=0.9177;MQ=65.78;MQ0=19;MQRankSum=-2.518;QD=13.02;ReadPosRankSum=0.247;VQSLOD=1.4825;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:41.89:0,42,495	1/1:1,7:8:8.82:221,9,0	0/0:33,0:15:17.62:0,18,299	0/0:38,0:18:22.62:0,23,361	0/0:29,0:29:75.03:0,75,2144	0/0:24,0:24:45.08:0,45,834	0/0:11,0:11:29.05:0,29,435	0/0:47,0:45:99:0,129,1548	0/0:21,0:21:56.67:0,57,3088	0/0:25,0:24:72.21:0,72,2899	0/0:16,0:16:42.05:0,42,1485	0/0:10,0:10:8.73:0,9,228	0/0:17,0:17:45.11:0,45,1805	0/0:9,0:9:26.95:0,27,374	1/1:1,19:20:21.38:270,21,0	0/0:13,0:12:24.04:0,24,486	0/0:14,0:14:42.02:0,42,1535	0/0:12,0:11:30.05:0,30,1408	0/0:20,0:16:48.04:0,48,1007	0/0:15,0:15:35.79:0,36,479	0/0:10,0:10:18.04:0,18,436	0/0:20,0:19:35.88:0,36,687	0/0:11,0:11:24:0,24,347	0/0:11,0:11:17.99:0,18,259	0/0:23,0:23:56.91:0,57,2158	0/0:21,0:20:60.09:0,60,825	0/0:18,0:17:35.03:0,35,449	0/0:11,0:10:26.97:0,27,357
chr10	100709059	.	ATCTCTC	A	1270.33	PASS	AB=0.804;AC=26;AF=0.481;AN=54;BaseQRankSum=3.952;DP=550;FS=0.000;HRun=0;HaplotypeScore=128.1593;InbreedingCoeff=0.5278;MQ=63.84;MQ0=23;MQRankSum=-3.324;QD=4.70;ReadPosRankSum=-1.712;VQSLOD=2.1977;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:22:13.29:17,0,13	1/1:8,0:8:3.01:40,3,0	./.	0/0:37,0:17:0.47:0,0,1	0/0:30,0:29:27.05:0,27,600	1/1:7,18:26:10.68:241,11,0	0/1:10,1:11:7.06:35,0,7	1/1:47,0:44:8.88:69,9,0	0/0:22,0:23:48.15:0,48,1275	0/0:28,0:28:2.22:0,2,952	0/0:18,0:18:12.13:0,12,461	1/1:11,0:12:6.02:68,6,0	0/0:18,0:18:23.15:0,23,509	0/1:7,0:9:2.30:2,0,19	1/1:21,0:20:0.40:1,0,0	1/1:6,7:12:12.04:220,12,0	0/0:15,0:17:27.07:0,27,618	0/0:11,0:11:25.89:0,26,598	1/1:13,8:17:10.07:246,10,0	0/1:8,8:16:2.83:37,0,3	1/1:12,0:10:9.03:171,9,0	0/0:20,0:19:11.95:0,12,99	0/0:10,0:10:5.67:0,6,40	0/0:8,0:12:0.46:0,0,1	0/0:22,0:22:33.08:0,33,780	1/1:21,1:21:12.51:201,13,0	1/1:17,1:17:5.05:34,5,0	1/1:10,2:11:3.01:61,3,0
chr10	100709103	.	CTTTCTCTCTG	C	391.91	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=5.514;DP=575;FS=40.395;HRun=0;HaplotypeScore=190.4804;InbreedingCoeff=0.1959;MQ=54.12;MQ0=19;MQRankSum=-0.556;QD=2.76;ReadPosRankSum=0.818;VQSLOD=1.3640;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:1.32:153,0,1	0/1:10,0:10:25.51:26,0,192	0/0:22,0:9:26.83:0,27,392	0/0:25,0:13:5.20:0,5,466	0/0:24,0:23:58.44:0,58,1691	0/0:30,0:30:36.12:0,36,651	0/0:15,0:15:26.51:0,27,386	0/0:22,0:18:43.37:0,43,785	0/0:30,0:30:80.30:0,80,2644	0/0:34,0:34:92.53:0,93,2463	0/0:21,0:21:52.60:0,53,1552	1/1:4,14:18:4.91:181,5,0	0/0:19,0:19:47.87:0,48,1314	0/1:11,0:11:4.04:44,0,4	0/0:24,0:24:25.46:0,25,374	0/1:17,0:17:19.25:19,0,484	0/0:19,0:20:54.15:0,54,1677	0/0:20,0:18:52.03:0,52,1771	0/1:22,0:20:52.55:53,0,761	0/0:20,0:20:37.24:0,37,573	0/0:25,0:24:40.08:0,40,855	0/0:14,11:25:11.90:0,12,30	0/0:9,0:8:3.28:0,3,8	0/1:14,0:14:4.60:30,0,5	0/0:18,0:17:46.97:0,47,1155	0/1:24,0:23:25.73:26,0,1004	0/0:20,0:20:35.15:0,35,623	0/0:9,0:9:21.07:0,21,360
chr10	100709443	.	A	ATGTGTGTG	1029.34	PASS	AB=0.867;AC=11;AF=0.196;AN=56;BaseQRankSum=3.691;DP=1027;FS=12.686;HRun=0;HaplotypeScore=233.3423;InbreedingCoeff=0.5973;MQ=52.07;MQ0=27;MQRankSum=-4.910;QD=4.01;ReadPosRankSum=-2.742;VQSLOD=0.5126;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,22:49:2.74:12,3,0	0/0:14,0:14:36.02:0,36,731	0/1:36,0:8:11.51:12,0,105	0/1:47,0:17:20.96:21,0,164	0/0:28,0:28:54.10:0,54,1169	0/0:29,0:29:69.79:0,70,1499	0/0:50,0:49:71.50:0,71,1081	0/0:38,0:34:49.91:0,50,812	0/0:44,0:44:92.99:0,93,1867	0/0:50,0:51:56.33:0,56,2103	0/0:24,0:25:44.94:0,45,907	1/1:12,19:33:21.07:763,21,0	0/0:34,0:32:87.11:0,87,1772	1/1:16,21:39:6.02:247,6,0	0/0:35,0:37:93.29:0,93,2174	0/0:33,0:32:63.13:0,63,1220	0/0:51,0:53:99:0,102,2048	0/0:31,0:31:0.76:0,1,1266	0/0:26,0:16:24.04:0,24,465	0/0:31,0:32:60.13:0,60,1181	0/0:90,0:84:99:0,161,3499	0/1:11,21:32:0.20:0,0,0	1/1:15,1:16:11.95:121,12,0	0/0:24,22:47:0:0,0,0	0/0:26,0:26:15.84:0,16,957	0/0:44,0:42:86.28:0,86,1913	0/0:19,0:19:54.09:0,54,1086	0/0:18,0:18:14.97:0,15,171
chr10	100709463	.	GTA	G	666.83	PASS	AB=0.975;AC=8;AF=0.143;AN=56;BaseQRankSum=4.007;DP=918;FS=1.176;HRun=0;HaplotypeScore=128.5433;InbreedingCoeff=0.4823;MQ=63.32;MQ0=8;MQRankSum=0.801;QD=3.97;ReadPosRankSum=-2.560;VQSLOD=2.5881;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:12.69:157,13,0	0/0:15,0:15:45.02:0,45,707	0/0:33,0:20:57.12:0,57,648	0/0:35,0:22:65.23:0,65,783	0/0:30,0:30:72.41:0,72,1102	0/0:31,0:31:87.20:0,87,1456	0/0:42,0:42:93.10:0,93,1475	0/0:33,0:31:81.64:0,82,1198	0/0:40,0:40:99:0,108,1924	0/0:54,0:54:99:0,142,2317	0/0:26,0:26:59.84:0,60,990	0/1:30,1:30:14.20:176,0,14	0/0:38,0:37:89.93:0,90,1604	0/1:23,1:23:30.29:30,0,34	0/0:42,0:42:99:0,112,1990	0/0:28,0:27:81.14:0,81,1354	0/0:49,0:49:99:0,111,2075	0/0:27,0:27:78.12:0,78,1271	0/0:15,0:12:36.10:0,36,593	0/0:30,0:30:68.95:0,69,1277	0/0:80,0:75:99:0,180,3076	0/1:22,0:21:6.14:101,0,6	1/1:21,2:23:26.43:272,26,0	0/1:33,1:34:7.41:77,0,7	0/0:28,0:28:61.18:0,61,1038	0/0:44,0:43:99:0,126,1927	0/0:22,0:22:66.16:0,66,1124	0/0:8,0:8:20.98:0,21,254
chr10	100710437	.	G	GA	1504.60	PASS	AB=0.843;AC=31;AF=0.554;AN=56;BaseQRankSum=-2.541;DP=445;FS=0.000;HRun=15;HaplotypeScore=65.5569;InbreedingCoeff=0.0850;MQ=50.26;MQ0=13;MQRankSum=-1.159;QD=4.49;ReadPosRankSum=-2.522;VQSLOD=0.6943;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,18:33:7.23:211,0,7	0/1:8,0:8:9.61:10,0,45	0/1:7,0:1:0:0,0,0	0/0:7,0:3:5.68:0,6,30	0/0:15,3:22:3.31:0,3,106	0/1:14,4:17:39.12:124,0,39	0/1:8,5:12:2.97:86,0,3	0/1:19,5:24:30.04:97,0,30	0/1:9,2:11:24:39,0,24	0/1:18,0:18:0.31:0,0,90	0/0:13,0:15:23.61:0,24,131	1/1:3,2:6:2.70:45,3,0	0/0:12,0:13:19.16:0,19,111	1/1:6,3:9:3:25,3,0	0/1:19,1:20:11.90:12,0,45	0/1:8,3:12:24.93:52,0,25	0/0:23,1:28:36.57:0,37,191	0/0:23,0:23:17.48:0,17,171	1/1:11,4:16:11.46:105,11,0	1/1:7,14:21:29.68:218,30,0	1/1:4,4:8:12.46:101,12,0	0/1:7,7:14:9.02:42,0,9	1/1:12,3:16:8:84,8,0	1/1:6,8:14:14.77:126,15,0	0/1:14,0:14:25.71:26,0,54	1/1:11,4:17:13.49:84,13,0	0/1:11,9:20:12.15:114,0,12	1/1:8,4:7:8.99:76,9,0
chr10	100712462	.	ACTCTCTCTCTCTCTCTCT	A	1437.28	PASS	AB=0.714;AC=9;AF=0.161;AN=56;BaseQRankSum=6.441;DP=559;FS=3.965;HRun=0;HaplotypeScore=213.5996;InbreedingCoeff=0.3364;MQ=69.87;MQ0=12;MQRankSum=-4.355;QD=11.69;ReadPosRankSum=1.115;VQSLOD=2.6465;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,10:31:57.34:315,0,57	0/0:10,0:10:15.04:0,15,775	0/0:35,0:17:3:0,3,25	0/0:43,0:24:0.47:0,0,1	0/0:17,0:17:18.03:0,18,800	0/0:18,0:18:19.24:0,19,546	0/0:17,0:24:18.33:0,18,339	0/0:39,0:37:17.07:0,17,206	0/0:18,0:17:12.03:0,12,683	0/0:17,0:16:27.14:0,27,1147	0/0:12,0:12:3.01:0,3,195	0/1:12,7:18:14.98:283,0,15	0/0:11,0:10:15.05:0,15,892	1/1:7,11:17:3.01:145,3,0	0/0:21,0:21:30.08:0,30,1770	0/0:12,0:12:15.02:0,15,302	0/0:22,0:20:20.27:0,20,869	0/0:9,0:9:8.67:0,9,167	0/0:17,0:17:23.25:0,23,486	0/0:15,0:28:32.21:0,32,410	0/0:25,0:25:15.52:0,16,559	0/1:8,8:16:44.36:382,0,44	1/1:9,4:13:2.70:153,3,0	1/1:10,15:25:6.02:290,6,0	0/0:18,0:17:9.47:0,9,100	0/0:11,0:11:9.02:0,9,156	0/0:15,0:22:9.91:0,10,219	0/0:6,0:5:5.99:0,6,64
chr10	100713192	.	A	AT	3515.60	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-13.509;DP=555;FS=5.928;HRun=7;HaplotypeScore=49.0956;InbreedingCoeff=0.9962;MQ=83.12;MQ0=0;MQRankSum=1.219;QD=32.25;ReadPosRankSum=2.389;VQSLOD=3.5195;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:63.19:761,63,0	0/0:6,0:6:15.02:0,15,145	0/0:18,0:18:31.56:0,32,282	0/0:14,0:14:26.46:0,26,224	0/0:28,0:28:75.09:0,75,713	0/0:24,0:24:69.08:0,69,654	0/0:24,0:24:66.07:0,66,624	0/0:38,0:38:87.11:0,87,836	0/0:22,0:22:60.07:0,60,573	0/0:27,0:27:81.12:0,81,779	0/0:24,0:24:66.08:0,66,631	1/1:1,10:11:30.09:362,30,0	0/0:18,0:18:51.08:0,51,493	1/1:1,16:17:45.14:544,45,0	0/0:13,0:13:36.06:0,36,348	0/0:22,0:22:60.07:0,60,568	0/0:17,0:17:48.03:0,48,450	0/0:14,0:14:36.06:0,36,348	0/0:14,0:14:36.04:0,36,339	0/0:33,0:33:84.11:0,84,805	0/0:17,0:17:33.04:0,33,318	1/1:0,15:15:45.14:544,45,0	1/1:1,23:24:66.20:797,66,0	1/1:0,16:16:42.13:507,42,0	0/0:13,0:13:33.05:0,33,319	0/0:22,0:22:60.09:0,60,580	0/0:18,0:18:45.07:0,45,435	0/0:20,0:20:60.05:0,60,565
chr10	100713618	.	TAC	T	2485.71	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-1.512;DP=403;FS=2.655;HRun=0;HaplotypeScore=89.8688;InbreedingCoeff=0.9683;MQ=71.84;MQ0=5;MQRankSum=-0.173;QD=18.97;ReadPosRankSum=0.337;VQSLOD=3.6223;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:14:32.62:0,33,242	0/0:3,0:3:8.99:0,9,75	0/0:21,0:17:50.47:0,50,534	0/0:27,0:18:33.31:0,33,361	0/0:29,0:29:65.66:0,66,517	1/1:7,2:9:20.92:167,21,0	1/1:5,1:6:11.99:102,12,0	1/1:17,0:17:44.95:405,45,0	0/0:13,0:13:26.47:0,26,186	0/0:12,0:12:31.87:0,32,278	0/0:13,0:13:26.14:0,26,189	0/0:8,0:8:23.75:0,24,170	0/0:12,0:11:28.84:0,29,204	0/0:12,0:11:23.73:0,24,190	0/0:11,0:11:24.20:0,24,178	1/1:7,0:7:21:182,21,0	0/0:13,0:12:34.54:0,35,233	0/0:12,0:11:26.96:0,27,260	1/1:10,1:11:12.07:232,12,0	1/1:15,6:21:22.95:342,23,0	1/1:8,0:7:14.96:120,15,0	0/0:20,0:19:44.56:0,45,327	0/0:13,0:12:32.76:0,33,253	0/0:15,0:13:9.39:0,9,74	0/0:18,0:18:41.91:0,42,343	1/1:11,5:16:42.47:401,42,0	1/1:17,4:21:56.80:466,57,0	1/1:15,0:15:35.90:288,36,0
chr10	100713630	.	C	CT	979.73	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=2.615;DP=397;FS=3.338;HRun=1;HaplotypeScore=99.0970;InbreedingCoeff=0.9114;MQ=58.03;MQ0=8;MQRankSum=-2.722;QD=10.65;ReadPosRankSum=-4.920;VQSLOD=-0.1366;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,2:15:23.87:225,24,0	0/0:4,0:4:9.03:0,9,115	0/0:19,0:15:42.13:0,42,526	0/0:20,0:11:27.07:0,27,322	0/0:27,0:27:51.16:0,51,650	0/0:8,0:8:18.02:0,18,229	0/0:4,0:4:6.01:0,6,67	0/0:16,0:16:41.91:0,42,491	0/0:10,0:10:18.06:0,18,232	0/0:13,0:13:34.34:0,34,405	0/0:15,0:15:18.06:0,18,230	1/1:8,0:8:13.67:90,14,0	0/0:12,0:10:30.09:0,30,374	1/1:10,2:11:20.73:224,21,0	0/0:12,0:12:18.06:0,18,230	0/0:7,0:7:21.07:0,21,264	0/0:11,0:10:30.10:0,30,381	0/0:15,0:14:39.10:0,39,481	0/0:13,0:13:36.57:0,37,431	0/0:21,0:21:39.59:0,40,481	0/0:5,0:4:6.02:0,6,76	1/1:20,1:19:23.95:260,24,0	1/1:16,1:16:23.99:281,24,0	1/1:9,4:10:5.96:80,6,0	0/0:26,0:26:45.24:0,45,572	0/0:18,0:18:46.25:0,46,462	0/0:15,0:15:39.10:0,39,470	0/0:14,0:14:29.31:0,29,348
chr10	100713631	.	TC	T	919.54	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=3.932;DP=397;FS=2.225;HRun=1;HaplotypeScore=105.5142;InbreedingCoeff=0.9067;MQ=53.09;MQ0=8;MQRankSum=-3.969;QD=10.10;ReadPosRankSum=-5.741;VQSLOD=-0.6908;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,13:16:24.45:190,24,0	0/0:4,0:4:9.03:0,9,115	0/0:18,0:14:42.10:0,42,516	0/0:18,0:9:27.07:0,27,322	0/0:27,0:27:50.91:0,51,631	0/0:10,0:10:14.92:0,15,225	0/0:7,0:7:5.69:0,6,76	0/0:15,0:15:41.92:0,42,512	0/0:10,0:10:17.96:0,18,179	0/0:13,0:13:36.03:0,36,415	0/0:15,0:15:18.01:0,18,199	1/1:3,4:7:13.65:89,14,0	0/0:12,0:10:30.08:0,30,361	1/1:4,8:11:20.59:199,21,0	0/0:11,0:11:17.99:0,18,210	0/0:9,0:9:15.20:0,15,256	0/0:11,0:10:30.06:0,30,334	0/0:15,0:14:39.10:0,39,500	0/0:13,0:13:38.93:0,39,474	0/0:21,0:21:38.69:0,39,512	0/0:5,0:4:6.02:0,6,76	1/1:3,16:18:23.93:260,24,0	1/1:8,10:17:23.94:281,24,0	1/1:6,6:9:6:80,6,0	0/0:26,0:26:47.61:0,48,598	0/0:19,0:19:50.90:0,51,469	0/0:15,0:15:39.38:0,39,450	0/0:12,0:12:29.31:0,29,358
chr10	100713661	.	CTCTCTCTCTCTT	C	1959.84	PASS	AB=0.993;AC=26;AF=0.500;AN=52;BaseQRankSum=-1.272;DP=333;FS=26.456;HRun=0;HaplotypeScore=152.3268;InbreedingCoeff=-0.3435;MQ=40.82;MQ0=1;MQRankSum=-0.272;QD=7.18;ReadPosRankSum=3.671;VQSLOD=0.4510;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:3.01:0,3,58	1/1:1,0:1:2.94:18,3,0	./.	./.	0/1:14,0:14:27.53:28,0,92	0/1:11,0:11:20.99:84,0,21	0/1:13,0:12:1.21:71,0,1	0/1:11,0:11:34.26:107,0,34	0/1:10,0:10:7.59:8,0,174	0/1:19,0:18:65:201,0,65	0/1:13,0:13:9.31:9,0,103	0/1:9,0:9:23.13:31,0,23	0/1:11,0:10:39.21:39,0,210	0/1:18,0:17:43.01:43,0,50	0/0:7,0:7:5.91:0,6,50	1/1:14,0:14:16.01:104,16,0	0/1:12,0:11:41.80:42,0,504	0/1:13,0:12:11.72:12,0,542	1/1:7,0:7:17.24:220,17,0	0/1:20,3:23:9.11:113,0,9	0/0:4,0:3:2.90:0,3,16	0/0:13,0:13:3.37:0,3,17	0/1:21,0:20:34.09:34,0,66	0/0:16,0:14:6.26:0,6,34	0/1:16,0:16:61.84:105,0,62	0/1:21,0:21:36.73:500,0,37	1/1:8,2:10:8.30:297,8,0	1/1:6,0:6:0.91:42,1,0
chr10	100713663	.	CTCTCTCTCTT	C	2023.26	PASS	AB=0.975;AC=26;AF=0.481;AN=54;BaseQRankSum=-0.206;DP=337;FS=19.509;HRun=0;HaplotypeScore=141.0124;InbreedingCoeff=-0.4081;MQ=41.48;MQ0=1;MQRankSum=1.054;QD=7.20;ReadPosRankSum=5.560;VQSLOD=0.7618;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:1.34:0,1,37	1/1:1,0:1:2.96:19,3,0	./.	0/0:2,0:1:3.01:0,3,70	0/1:14,0:14:24.74:30,0,25	0/1:9,1:10:20.77:76,0,21	0/1:13,1:13:13.20:69,0,13	0/1:10,0:10:30.21:109,0,30	0/1:9,0:9:8.60:9,0,75	0/1:20,0:19:8.89:226,0,9	0/1:13,0:13:18.51:19,0,44	0/1:10,0:10:28.43:28,0,36	0/1:12,0:11:44.56:45,0,107	0/1:17,0:16:36.83:47,0,37	0/1:7,0:7:3.80:4,0,10	1/1:14,0:14:3.37:89,3,0	0/1:12,0:11:42.21:42,0,316	0/1:13,0:12:27.66:28,0,391	1/1:5,1:6:17.99:220,18,0	0/1:19,3:22:8.94:105,0,9	0/0:4,0:3:5.81:0,6,32	0/0:13,0:13:6.25:0,6,31	0/1:22,0:21:31.22:31,0,60	0/0:16,0:14:3.62:0,4,29	0/1:17,0:17:43.30:106,0,43	1/1:19,2:21:9.57:578,10,0	0/1:8,2:10:2.43:256,0,2	0/1:7,0:7:10.30:38,0,10
chr10	100713665	.	CTCTCTCTT	C	2556.04	PASS	AB=0.997;AC=33;AF=0.611;AN=54;BaseQRankSum=0.286;DP=348;FS=9.439;HRun=0;HaplotypeScore=134.9470;InbreedingCoeff=-0.3333;MQ=42.29;MQ0=1;MQRankSum=-0.736;QD=7.47;ReadPosRankSum=3.596;VQSLOD=2.0058;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,1:20:16.06:18,0,16	1/1:1,0:1:2.94:18,3,0	./.	0/0:2,0:1:3.01:0,3,58	1/1:13,1:14:11.91:77,12,0	0/1:11,0:11:17.88:87,0,18	0/1:14,0:13:1.06:72,0,1	0/1:10,0:10:27.79:109,0,28	1/1:11,0:11:5.08:56,5,0	1/1:22,0:21:26.25:339,26,0	0/1:15,0:15:6.59:89,0,7	0/1:10,0:10:20.05:33,0,20	0/1:12,0:11:33.19:67,0,33	0/1:18,0:17:15:77,0,15	1/1:6,1:7:4.25:36,4,0	1/1:15,0:15:19.62:132,20,0	0/1:14,0:13:97.50:97,0,137	0/1:13,0:12:34.73:35,0,251	1/1:6,0:6:17.99:199,18,0	0/1:20,0:20:0.22:95,0,0	0/0:4,0:3:5.78:0,6,31	0/1:14,0:14:5.27:43,0,5	0/1:23,0:22:11.91:42,0,12	0/1:18,0:16:19.30:19,0,21	0/1:16,0:16:16.45:129,0,16	1/1:18,2:20:25.67:586,26,0	0/1:10,0:10:7.98:211,0,8	0/1:7,0:7:8.05:39,0,8
chr10	100713667	.	CTCTCTT	C	3414.04	PASS	AB=0.989;AC=43;AF=0.796;AN=54;BaseQRankSum=-2.617;DP=346;FS=14.037;HRun=0;HaplotypeScore=122.0833;InbreedingCoeff=-0.0957;MQ=42.43;MQ0=1;MQRankSum=0.693;QD=9.95;ReadPosRankSum=3.175;VQSLOD=1.8920;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,1:19:0.38:19,0,0	1/1:1,0:1:2.94:18,3,0	./.	0/0:3,0:1:3.01:0,3,30	1/1:12,1:13:12.40:100,12,0	0/1:11,0:11:3.80:79,0,4	1/1:16,0:15:7.72:146,8,0	1/1:11,0:11:16.16:166,16,0	1/1:10,0:10:16.85:140,17,0	1/1:20,2:21:33.69:396,34,0	1/1:15,1:16:17.88:168,18,0	0/1:9,0:9:2.82:56,0,3	1/1:11,0:10:3.93:88,4,0	0/1:16,1:16:9.15:95,0,9	1/1:5,2:7:5.97:76,6,0	1/1:15,0:15:22.47:158,22,0	0/1:14,0:13:14.93:164,0,15	0/1:13,0:12:64.15:64,0,101	1/1:5,0:5:14.98:155,15,0	1/1:21,0:21:7.02:145,7,0	0/1:4,0:3:9.92:19,0,10	0/1:13,0:13:4.07:62,0,4	1/1:23,0:22:6.43:69,6,0	0/1:18,0:16:17.07:36,0,17	1/1:16,0:16:14.54:216,15,0	1/1:19,0:19:22.81:512,23,0	1/1:11,0:11:4.47:194,4,0	1/1:7,0:7:8.49:72,8,0
chr10	100713669	.	CTCTT	C	3978.02	PASS	AB=0.976;AC=49;AF=0.907;AN=54;BaseQRankSum=-0.880;DP=350;FS=5.857;HRun=0;HaplotypeScore=111.8430;InbreedingCoeff=0.1181;MQ=42.84;MQ0=1;MQRankSum=0.631;QD=11.50;ReadPosRankSum=2.767;VQSLOD=2.8182;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,1:19:5.57:47,6,0	1/1:1,0:1:2.94:18,3,0	./.	0/0:4,0:1:3.01:0,3,30	1/1:12,1:13:11.93:111,12,0	0/1:10,0:10:4.43:62,0,4	1/1:18,0:17:13.50:194,14,0	1/1:11,0:11:31.88:207,32,0	1/1:11,0:11:20.31:219,20,0	1/1:21,1:21:49.45:433,49,0	1/1:15,0:15:17.99:182,18,0	1/1:9,0:9:0.39:76,0,0	1/1:9,2:10:17.33:132,17,0	1/1:16,0:15:10.37:128,10,0	1/1:7,0:7:5.69:59,6,0	1/1:15,0:15:22.75:159,23,0	1/1:15,0:14:38.32:300,38,0	0/1:12,1:12:14.32:133,0,14	1/1:5,0:5:14.98:142,15,0	1/1:22,0:22:10.45:171,10,0	0/1:5,0:4:9.92:19,0,10	1/1:13,1:14:13.20:102,13,0	1/1:21,0:20:11.04:93,11,0	1/1:19,0:17:11.16:76,11,0	1/1:17,0:17:14.77:217,15,0	1/1:19,0:19:22.87:452,23,0	1/1:11,0:11:18.93:172,19,0	1/1:6,0:6:8.98:73,9,0
chr10	100713671	.	CTT	C	4239.74	PASS	AB=1.000;AC=51;AF=0.944;AN=54;BaseQRankSum=-0.852;DP=356;FS=3.095;HRun=3;HaplotypeScore=104.0372;InbreedingCoeff=0.2256;MQ=43.19;MQ0=1;MQRankSum=1.244;QD=12.04;ReadPosRankSum=2.180;VQSLOD=1.9177;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:19:5.98:47,6,0	1/1:1,0:1:2.94:18,3,0	./.	0/0:4,0:1:3.01:0,3,30	1/1:13,0:13:11.93:102,12,0	1/1:12,0:12:3.14:109,3,0	1/1:18,0:17:27.57:212,28,0	1/1:11,0:11:32.64:220,33,0	1/1:11,0:11:20.37:194,20,0	1/1:22,0:21:59.32:456,59,0	1/1:15,0:15:17.98:167,18,0	1/1:8,1:9:0.49:76,0,0	1/1:10,1:10:17.87:147,18,0	1/1:13,4:16:15.80:170,16,0	1/1:7,0:7:3.90:48,4,0	1/1:15,0:15:22.92:161,23,0	1/1:15,0:14:41.95:365,42,0	1/1:12,0:12:27.41:205,27,0	1/1:5,0:5:14.98:129,15,0	1/1:22,0:22:11.60:173,12,0	0/1:5,0:4:8.59:19,0,9	1/1:10,3:13:13.87:106,14,0	1/1:20,2:21:13.18:114,13,0	1/1:18,1:17:13.64:101,14,0	1/1:18,0:18:19.98:244,20,0	1/1:21,0:21:48.34:444,48,0	1/1:11,0:11:19.75:137,20,0	1/1:6,0:6:8.98:73,9,0
chr10	100714302	.	CCTTT	C	2612.87	PASS	AB=0.948;AC=26;AF=0.500;AN=52;BaseQRankSum=7.185;DP=575;FS=18.553;HRun=0;HaplotypeScore=151.5510;InbreedingCoeff=0.4522;MQ=56.53;MQ0=5;MQRankSum=-5.477;QD=7.57;ReadPosRankSum=0.391;VQSLOD=1.9191;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:3.52:198,0,4	0/1:7,0:7:11.08:11,0,184	./.	./.	0/1:21,0:21:0.88:1,0,441	0/0:24,1:25:1.86:0,2,911	0/0:13,0:13:20.99:0,21,288	0/1:36,0:35:0:0,0,0	0/0:8,0:18:12.03:0,12,183	0/0:32,0:32:57.18:0,57,1148	0/0:14,0:23:17.84:0,18,218	1/1:21,0:21:6.50:291,6,0	0/0:21,0:21:36.07:0,36,673	0/1:11,0:11:53.50:61,0,53	0/0:26,0:26:31.19:0,31,691	0/1:9,10:20:34.26:213,0,34	0/1:29,0:29:16.21:16,0,460	0/0:8,0:22:30.10:0,30,524	1/1:17,3:20:15.05:231,15,0	1/1:21,4:25:21.07:324,21,0	1/1:8,3:11:9.03:139,9,0	1/1:29,0:29:25.26:321,25,0	1/1:18,0:18:20.96:185,21,0	0/1:10,0:11:4.80:68,0,5	0/0:27,0:26:36.51:0,37,639	1/1:12,4:16:24.05:328,24,0	1/1:11,17:28:15.05:232,15,0	1/1:9,5:12:14.94:177,15,0
chr10	100714303	.	CT	C	609.59	PASS	AB=0.739;AC=7;AF=0.125;AN=56;BaseQRankSum=11.595;DP=572;FS=20.231;HRun=3;HaplotypeScore=125.7223;InbreedingCoeff=0.0530;MQ=56.32;MQ0=5;MQRankSum=-9.074;QD=5.17;ReadPosRankSum=-0.956;VQSLOD=-0.7148;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,11:28:60.16:149,0,60	0/0:6,1:7:19.48:0,19,105	0/0:13,0:10:27.08:0,27,359	0/0:8,0:7:21.06:0,21,281	0/0:21,0:21:60.19:0,60,836	0/0:25,0:25:73.75:0,74,1011	0/0:13,0:13:36.12:0,36,502	0/0:34,0:33:93.29:0,93,1277	0/0:18,0:18:33.04:0,33,376	0/0:32,0:32:93.31:0,93,1329	0/0:22,0:22:47.03:0,47,607	1/1:8,12:20:0.63:225,1,0	0/0:21,0:21:60.20:0,60,851	0/1:9,3:12:36.21:36,0,79	0/0:26,0:26:68.99:0,69,384	0/0:20,0:20:34.85:0,35,382	0/0:29,0:29:79.82:0,80,1108	0/0:24,0:23:47.98:0,48,512	0/0:20,0:20:47.13:0,47,602	0/0:25,0:25:62.05:0,62,745	0/0:12,0:12:22.68:0,23,228	0/1:15,13:28:88.12:153,0,88	0/1:10,8:18:35.82:89,0,36	0/1:9,3:12:25.93:83,0,26	0/0:27,0:26:75.18:0,75,1043	0/0:16,0:16:33.43:0,33,350	0/0:27,0:27:37.87:0,38,442	0/0:14,0:12:25.54:0,26,254
chr10	100714307	.	CTTTCTTT	C	2158.40	PASS	AB=0.764;AC=7;AF=0.125;AN=56;BaseQRankSum=11.688;DP=563;FS=4.221;HRun=0;HaplotypeScore=185.9008;InbreedingCoeff=-0.1411;MQ=55.18;MQ0=11;MQRankSum=-10.764;QD=16.73;ReadPosRankSum=1.851;VQSLOD=2.9539;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,11:29:99:419,0,128	0/0:6,0:7:20.22:0,20,421	0/0:12,0:9:27.08:0,27,342	0/1:8,0:7:9.94:10,0,200	0/0:20,0:20:60.18:0,60,1414	0/0:24,0:24:72.24:0,72,2122	0/0:12,0:12:36.09:0,36,918	0/0:31,0:29:87.27:0,87,1207	0/0:17,0:17:30.07:0,30,619	0/0:32,0:32:96.32:0,96,2784	0/0:21,0:21:48.16:0,48,973	0/1:9,12:21:99:613,0,122	0/0:20,0:20:60.16:0,60,1691	0/1:9,3:12:52.43:147,0,52	0/0:26,0:26:66.42:0,66,1371	0/0:20,0:20:45.11:0,45,624	0/0:29,0:28:81.22:0,81,1705	0/0:24,0:23:48.16:0,48,1392	0/0:23,0:19:57.15:0,57,724	0/0:26,0:26:69.17:0,69,854	0/0:10,0:10:24.06:0,24,303	0/1:15,13:28:99:604,0,131	0/1:11,8:19:91.50:335,0,91	0/1:9,3:12:99:161,0,123	0/0:25,0:24:74.92:0,75,1838	0/0:15,0:15:45.11:0,45,536	0/0:28,0:28:45.03:0,45,556	0/0:12,0:10:29.73:0,30,305
chr10	100714361	.	CCCTTCCTTCCTTCCTT	C	4663.75	PASS	AB=0.664;AC=10;AF=0.179;AN=56;BaseQRankSum=7.905;DP=614;FS=3.577;HRun=0;HaplotypeScore=294.6632;InbreedingCoeff=0.7523;MQ=47.28;MQ0=14;MQRankSum=-7.026;QD=34.55;ReadPosRankSum=3.645;VQSLOD=3.6814;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,14:30:7.24:754,0,7	0/0:6,0:15:30.08:0,30,458	0/0:33,0:13:18.06:0,18,611	0/0:18,0:5:12.04:0,12,457	0/0:15,0:15:30.09:0,30,1648	0/0:37,0:37:84.24:0,84,2565	0/0:15,0:15:30.06:0,30,778	0/0:26,0:26:41.98:0,42,1309	0/0:17,0:17:36.12:0,36,2419	0/0:24,0:23:45.15:0,45,2894	0/0:22,0:22:42.14:0,42,2903	1/1:11,8:19:23.93:718,24,0	0/0:25,0:25:66.19:0,66,3328	1/1:3,10:13:12.01:421,12,0	0/0:8,0:26:48.14:0,48,780	0/0:23,0:22:42.04:0,42,1141	0/0:24,0:22:51.16:0,51,2955	0/0:26,0:26:42.13:0,42,2729	0/0:15,0:18:35.82:0,36,1588	0/0:26,0:26:24.08:0,24,803	0/0:3,0:12:15.05:0,15,771	1/1:12,14:26:38.87:1166,39,0	1/1:8,22:30:38.24:1461,38,0	0/1:7,9:16:99:143,0,147	0/0:23,0:23:63.21:0,63,3622	0/0:7,0:23:51.17:0,51,2492	0/0:21,0:21:30.04:0,30,872	0/0:4,0:8:12.04:0,12,539
chr10	100714382	.	C	CCTTCCTTC	6053.52	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=0.299;DP=569;FS=0.487;HRun=0;HaplotypeScore=180.7145;InbreedingCoeff=0.8891;MQ=50.47;MQ0=10;MQRankSum=-1.788;QD=27.02;ReadPosRankSum=-1.211;VQSLOD=4.4582;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:13.48:0,13,147	0/0:11,0:11:24.93:0,25,373	0/0:23,0:13:6.02:0,6,72	0/0:13,0:8:9.01:0,9,123	0/0:13,0:13:21.07:0,21,524	1/1:36,0:36:69:2051,69,0	1/1:16,0:16:24.08:734,24,0	1/1:25,0:25:5.24:31,5,0	0/0:18,0:18:36.12:0,36,828	0/0:21,0:20:36.12:0,36,856	0/0:21,0:21:42.10:0,42,997	0/0:13,0:13:12.93:0,13,189	0/0:22,0:22:45.12:0,45,958	0/0:13,0:13:9.87:0,10,104	0/0:22,0:22:33.11:0,33,604	1/1:22,0:21:36.11:1288,36,0	0/0:26,0:25:39.60:0,40,922	0/0:22,0:22:40.23:0,40,941	1/1:26,0:24:9.95:174,10,0	1/1:15,16:32:10.20:205,10,0	1/1:15,0:15:11.97:98,12,0	0/0:21,0:21:24.34:0,24,229	0/0:25,0:25:14.30:0,14,313	0/0:13,0:13:6.02:0,6,93	0/0:25,0:25:42.11:0,42,887	1/1:25,0:25:44.92:376,45,0	1/1:21,0:21:23.44:1048,23,0	1/1:6,0:6:5.99:49,6,0
chr10	100715052	.	GA	G	3507.75	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-4.297;DP=553;FS=0.778;HRun=10;HaplotypeScore=76.3573;InbreedingCoeff=0.9590;MQ=73.19;MQ0=0;MQRankSum=-0.501;QD=21.26;ReadPosRankSum=3.905;VQSLOD=4.4449;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:62.99:547,63,0	1/1:1,15:16:8.83:305,9,0	0/0:19,0:16:26.99:0,27,268	0/0:14,0:13:23.77:0,24,207	0/0:28,0:28:72.14:0,72,771	0/0:3,0:20:45.45:0,45,227	0/0:2,1:15:5.37:0,5,116	0/0:8,0:30:71.36:0,71,393	0/0:10,0:10:30.05:0,30,312	0/0:23,0:23:51.13:0,51,557	0/0:18,0:18:42.06:0,42,443	1/1:0,17:17:44.99:391,45,0	0/0:19,0:19:48.13:0,48,531	1/1:5,12:17:32.99:286,33,0	1/1:1,20:21:53.99:469,54,0	0/0:1,0:17:42.65:0,43,213	0/0:22,0:22:51.14:0,51,564	0/0:20,0:20:45.10:0,45,485	0/0:6,0:21:45.01:0,45,225	0/0:5,0:27:54.70:0,55,285	0/0:5,0:15:34.58:0,35,218	1/1:2,24:26:65.98:573,66,0	1/1:1,19:20:47.99:416,48,0	1/1:0,23:23:59.99:521,60,0	0/0:20,0:20:48.13:0,48,530	0/0:2,0:18:40.43:0,40,211	0/0:8,0:29:48.33:0,48,242	0/0:0,0:3:8.52:0,9,43
chr10	100715318	.	A	AGG	632.97	PASS	AB=1.000;AC=24;AF=0.923;AN=26;BaseQRankSum=-1.561;DP=45;FS=0.000;HRun=1;HaplotypeScore=19.2475;InbreedingCoeff=0.1058;MQ=40.42;MQ0=0;MQRankSum=1.214;QD=19.78;ReadPosRankSum=-1.561;VQSLOD=0.5029;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:1:3.01:40,3,0	1/1:0,1:1:3.01:30,3,0	./.	./.	0/1:1,0:1:0:0,0,0	0/1:4,0:4:0:0,0,0	1/1:4,0:4:9.03:132,9,0	1/1:5,0:5:10.75:150,11,0	./.	./.	./.	1/1:2,0:2:3.01:52,3,0	./.	./.	1/1:3,0:3:3.01:41,3,0	1/1:3,0:3:4.26:47,4,0	./.	./.	1/1:1,1:2:6.02:71,6,0	./.	1/1:1,1:2:3.01:35,3,0	1/1:1,0:1:3.01:40,3,0	./.	./.	./.	1/1:1,2:3:6.02:68,6,0	./.	./.
chr10	100715819	.	G	GA	512.56	PASS	AB=0.790;AC=12;AF=0.222;AN=54;BaseQRankSum=-7.071;DP=225;FS=11.041;HRun=1;HaplotypeScore=74.9433;InbreedingCoeff=-0.3346;MQ=71.26;MQ0=0;MQRankSum=-3.549;QD=4.17;ReadPosRankSum=4.824;VQSLOD=-0.5056;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:15.05:0,15,209	0/0:7,0:7:6.02:0,6,84	0/0:4,0:2:5.97:0,6,49	0/0:16,0:16:28.32:0,28,322	0/0:3,1:4:6.91:0,7,85	0/1:9,1:10:12.85:13,0,265	0/1:11,2:13:37.99:38,0,363	0/1:10,3:13:49.35:49,0,377	0/1:8,2:10:52.92:53,0,255	0/0:5,0:5:12.02:0,12,150	./.	0/1:9,2:11:38.44:38,0,189	0/1:3,2:5:51.58:52,0,109	0/1:7,3:10:70:70,0,185	0/1:1,4:5:29.85:87,0,30	0/1:6,5:11:99:138,0,218	0/0:15,0:15:39.06:0,39,536	0/0:4,0:4:5.98:0,6,62	0/0:7,1:8:18.06:0,18,247	0/0:8,0:8:17.72:0,18,223	0/1:16,2:18:10.49:10,0,308	0/0:3,0:3:9.03:0,9,126	0/0:3,0:3:8.99:0,9,104	0/0:9,0:9:6.02:0,6,84	0/0:6,0:6:15.05:0,15,209	0/1:5,4:9:85.43:85,0,181	0/1:7,1:8:21.62:22,0,150	0/0:1,0:1:3.01:0,3,42
chr10	100717066	.	A	AAAG	2665.01	PASS	AB=0.922;AC=22;AF=0.393;AN=56;BaseQRankSum=4.564;DP=451;FS=31.865;HRun=0;HaplotypeScore=77.7612;InbreedingCoeff=-0.0441;MQ=56.87;MQ0=13;MQRankSum=1.296;QD=9.48;ReadPosRankSum=4.246;VQSLOD=1.4212;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,16:25:4.87:467,5,0	0/1:13,0:12:75.02:75,0,110	0/0:26,0:9:0.36:0,0,42	0/0:18,0:7:12.38:0,12,93	0/0:8,0:8:23.65:0,24,184	0/1:22,0:21:64.82:237,0,65	0/1:15,0:14:54.60:87,0,55	0/1:26,0:23:55.12:55,0,141	0/0:9,0:8:17.93:0,18,173	0/0:24,0:23:59.63:0,60,583	0/0:14,0:14:32.06:0,32,298	0/1:6,10:16:0.57:225,0,1	0/0:7,0:7:15.03:0,15,183	0/1:9,1:18:20.48:111,0,20	0/1:13,0:12:80.59:86,0,81	0/1:6,0:6:4.97:60,0,5	0/0:36,0:34:87.75:0,88,856	0/0:11,0:11:20.77:0,21,210	0/1:21,0:21:59.66:291,0,60	0/1:17,0:15:19.19:88,0,19	0/1:5,0:5:6.44:52,0,6	0/1:6,0:10:32.61:97,0,33	1/1:2,3:11:11.96:193,12,0	1/1:2,6:10:18.05:275,18,0	0/0:17,0:17:44.91:0,45,449	0/1:24,0:21:61.85:276,0,62	0/1:10,0:10:47.51:66,0,48	1/1:14,0:12:7.27:96,7,0
chr10	100717149	.	AT	A	3205.32	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.217;DP=388;FS=3.056;HRun=8;HaplotypeScore=64.4337;InbreedingCoeff=0.9667;MQ=76.84;MQ0=0;MQRankSum=-2.812;QD=21.95;ReadPosRankSum=-1.444;VQSLOD=3.6355;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.22:0,75,891	0/0:7,0:7:21.04:0,21,234	0/0:17,0:16:15.41:0,15,269	0/0:7,0:7:15.01:0,15,152	0/0:10,0:10:30.09:0,30,362	1/1:5,14:19:48.02:449,48,0	1/1:3,13:16:33.05:319,33,0	1/1:3,32:35:93.11:882,93,0	0/0:9,0:9:27.08:0,27,326	0/0:20,0:20:51.14:0,51,598	0/0:19,0:19:54.12:0,54,636	0/0:12,0:12:27.04:0,27,310	0/0:3,0:3:9.03:0,9,109	0/0:11,0:11:18.06:0,18,217	0/0:10,0:10:30.06:0,30,346	1/1:2,4:6:18.03:174,18,0	0/0:21,0:21:57.11:0,57,656	0/0:16,0:16:48.15:0,48,580	1/1:1,16:17:48.01:446,48,0	1/1:1,7:8:24.04:232,24,0	1/1:1,9:10:27.04:260,27,0	0/0:9,0:9:27.08:0,27,326	0/0:9,0:9:27.08:0,27,325	0/0:16,0:16:45.14:0,45,539	0/0:18,0:18:51.13:0,51,594	1/1:3,8:11:27.03:256,27,0	1/1:1,2:3:6.01:58,6,0	1/1:1,20:21:36.06:348,36,0
chr10	100717226	.	G	GA	4736.52	PASS	AB=0.563;AC=19;AF=0.339;AN=56;BaseQRankSum=11.763;DP=455;FS=1.243;HRun=8;HaplotypeScore=74.1288;InbreedingCoeff=0.9321;MQ=72.40;MQ0=0;MQRankSum=-2.621;QD=28.53;ReadPosRankSum=-0.901;VQSLOD=4.7908;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:75.03:0,75,686	0/0:7,0:7:21.01:0,21,192	0/0:13,1:13:25.37:0,25,203	0/0:10,0:10:20.10:0,20,174	0/0:22,1:23:55.42:0,55,542	1/1:2,18:20:29.70:596,30,0	1/1:4,13:17:35.99:383,36,0	1/1:2,30:32:90.24:1017,90,0	0/0:7,0:7:15.01:0,15,137	0/0:22,0:22:63:0,63,569	0/0:19,0:19:54.03:0,54,494	0/0:15,0:15:37.26:0,37,333	0/0:12,0:12:33.02:0,33,302	0/0:16,0:16:42:0,42,380	0/0:14,0:14:42.02:0,42,384	1/1:0,5:5:12.04:138,12,0	0/0:20,0:20:60.03:0,60,549	0/0:20,0:20:48.02:0,48,439	1/1:2,13:15:39.12:449,39,0	1/1:2,17:19:51.15:588,51,0	0/1:2,7:9:3.40:218,0,3	0/0:16,0:16:42.02:0,42,384	0/0:13,0:13:33.01:0,33,302	0/0:16,0:16:38.51:0,39,351	0/0:16,0:16:48.03:0,48,439	1/1:4,23:27:47.74:792,48,0	1/1:2,11:14:36.11:415,36,0	1/1:4,4:8:12.04:138,12,0
chr10	100717462	.	C	CAACCTCCATACAACTG	12579.10	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.680;DP=676;FS=0.472;HRun=0;HaplotypeScore=275.0210;InbreedingCoeff=0.9829;MQ=80.32;MQ0=0;MQRankSum=-12.761;QD=84.42;ReadPosRankSum=0.087;VQSLOD=3.6788;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,4:42:36.12:2092,36,0	0/0:7,0:7:18.06:0,18,803	0/0:20,0:20:41.15:0,41,1203	0/0:22,0:24:42.51:0,43,1438	0/0:17,0:17:51.18:0,51,2170	0/0:25,0:25:72.25:0,72,2909	0/0:24,0:24:72.25:0,72,3056	0/0:33,0:33:96.30:0,96,3811	0/0:27,0:27:78.27:0,78,3547	0/0:20,0:20:51.17:0,51,2240	0/0:19,0:19:39.12:0,39,1666	1/1:6,8:24:36.12:2602,36,0	0/0:22,0:22:63.22:0,63,2820	1/1:10,13:28:66.23:4165,66,0	0/0:27,0:27:75.26:0,75,3337	0/0:15,0:15:45.15:0,45,2052	0/0:46,0:46:99:0,135,5913	0/0:21,0:21:63.22:0,63,2701	0/0:20,0:20:57.17:0,57,2211	0/0:32,0:32:75.24:0,75,3188	0/0:31,0:31:87.27:0,87,3398	1/1:6,3:20:24.08:1454,24,0	1/1:9,1:16:18.06:1094,18,0	1/1:8,2:19:18.06:1172,18,0	0/0:38,0:38:99:0,102,4413	0/0:33,0:33:84.27:0,84,3644	0/0:23,0:23:60.19:0,60,2640	0/0:3,0:3:9.03:0,9,366
chr10	100718015	.	CG	C	2293.75	PASS	AC=20;AF=0.385;AN=52;BaseQRankSum=8.181;DP=630;FS=1.616;HRun=2;HaplotypeScore=52.4090;InbreedingCoeff=0.9124;MQ=18.79;MQ0=342;MQRankSum=-0.741;QD=11.82;ReadPosRankSum=-1.992;VQSLOD=1.3923;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:7:21.07:0,21,332	0/0:7,0:7:21:0,21,303	./.	./.	0/0:23,0:21:45.15:0,45,708	1/1:7,14:14:36.08:480,36,0	1/1:21,5:4:12.04:162,12,0	1/1:5,5:5:12.04:168,12,0	0/0:35,0:15:42.14:0,42,668	0/0:24,0:17:42.10:0,42,640	0/0:11,0:11:24.08:0,24,376	0/0:38,0:17:51.11:0,51,779	0/0:28,0:12:30.03:0,30,447	0/0:24,0:12:30.10:0,30,472	0/0:40,0:12:33.11:0,33,525	1/1:17,14:14:36.09:475,36,0	0/0:58,0:10:27.09:0,27,430	0/0:28,0:4:12.02:0,12,167	1/1:6,3:3:6.02:84,6,0	1/1:2,20:19:21.03:271,21,0	1/1:22,3:3:3.01:42,3,0	0/0:12,0:10:21:0,21,299	0/0:16,0:14:33.04:0,33,494	0/0:28,0:2:6.02:0,6,95	0/0:15,0:14:38.93:0,39,529	1/1:9,9:9:27.09:376,27,0	1/1:13,13:13:24.03:312,24,0	1/1:2,4:4:9.03:126,9,0
chr10	100718280	.	C	CG	54.95	PASS	AC=8;AF=0.267;AN=30;BaseQRankSum=3.419;DP=233;FS=2.600;HRun=0;HaplotypeScore=27.9421;InbreedingCoeff=0.4076;MQ=14.69;MQ0=168;MQRankSum=0.600;QD=3.66;ReadPosRankSum=-0.840;VQSLOD=2.7824;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:6:9.03:0,9,126	0/0:1,0:1:3.01:0,3,42	./.	./.	./.	./.	./.	./.	0/0:9,0:1:3.01:0,3,34	0/0:5,0:1:3.01:0,3,42	./.	0/0:12,0:7:3.01:0,3,42	./.	0/0:12,0:10:18.04:0,18,250	0/0:13,0:2:3.01:0,3,42	1/1:1,1:1:3.01:34,3,0	./.	./.	1/1:6,1:1:3.01:30,3,0	1/1:1,2:2:6.01:61,6,0	./.	0/0:10,0:8:12.04:0,12,167	0/0:6,0:6:9.03:0,9,125	0/0:14,0:4:3.01:0,3,42	0/0:12,0:5:3.01:0,3,42	./.	1/1:2,1:1:3.01:33,3,0	./.
chr10	100718305	.	TG	T	637.94	PASS	AC=16;AF=0.381;AN=42;BaseQRankSum=3.271;DP=187;FS=12.267;HRun=6;HaplotypeScore=30.2063;InbreedingCoeff=0.6255;MQ=23.37;MQ0=77;MQRankSum=-4.133;QD=13.02;ReadPosRankSum=2.003;VQSLOD=1.0184;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:6:6.02:0,6,73	0/0:2,0:2:2.98:0,3,22	./.	./.	./.	1/1:1,1:1:3.01:32,3,0	./.	1/1:1,2:2:6:55,6,0	0/0:7,0:3:8.94:0,9,79	./.	./.	0/0:14,0:7:3.01:0,3,35	0/0:4,0:2:3.01:0,3,39	0/0:11,0:10:18.04:0,18,213	0/0:10,0:4:12.04:0,12,158	1/1:0,4:4:9.02:97,9,0	0/0:9,0:4:12.02:0,12,142	0/0:8,0:2:3.01:0,3,39	1/1:1,5:5:15.04:161,15,0	1/1:1,8:8:15.04:161,15,0	1/1:11,3:3:6.01:63,6,0	0/0:14,0:10:9.03:0,9,118	0/0:6,0:5:3.01:0,3,39	0/0:11,0:6:3.01:0,3,39	0/0:6,0:2:6.02:0,6,79	1/1:2,3:3:9.02:97,9,0	1/1:0,6:5:12.03:125,12,0	./.
chr10	100718428	.	T	TA	5312.13	PASS	AB=0.552;AC=19;AF=0.339;AN=56;BaseQRankSum=-5.600;DP=450;FS=3.186;HRun=8;HaplotypeScore=48.3853;InbreedingCoeff=0.9076;MQ=59.12;MQ0=0;MQRankSum=-1.032;QD=28.41;ReadPosRankSum=-1.107;VQSLOD=4.9368;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:90.09:0,90,839	0/0:5,0:5:15.01:0,15,137	0/0:5,0:4:12:0,12,106	0/0:7,0:5:12:0,12,107	0/0:13,0:13:39.02:0,39,356	1/1:1,15:16:48.13:545,48,0	1/1:3,11:12:27.08:312,27,0	1/1:4,27:31:81.24:935,81,0	0/0:15,0:15:45.01:0,45,407	0/0:15,0:15:45.02:0,45,409	0/0:11,0:11:33:0,33,297	0/0:15,0:15:36.02:0,36,329	0/0:12,0:12:33:0,33,297	0/0:17,0:17:51.03:0,51,467	0/0:6,0:6:15.01:0,15,137	1/1:3,11:14:36.09:406,36,0	0/0:19,0:19:51.03:0,51,467	0/0:16,0:16:41.97:0,42,371	1/1:1,14:15:42.12:485,42,0	1/1:3,25:28:63.19:727,63,0	0/1:3,13:16:12.81:373,0,13	0/0:17,0:17:42.01:0,42,383	0/0:20,0:20:42.02:0,42,384	0/0:22,0:22:60.01:0,60,544	0/0:10,0:10:30.02:0,30,275	1/1:4,19:23:35.68:650,36,0	1/1:2,21:22:63.14:706,63,0	1/1:0,7:7:15.04:173,15,0
chr10	100719463	.	AGTT	A	1113.68	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.448;DP=697;FS=4.187;HRun=0;HaplotypeScore=102.8028;InbreedingCoeff=0.9989;MQ=87.75;MQ0=0;MQRankSum=-3.151;QD=33.75;ReadPosRankSum=-0.078;VQSLOD=3.8950;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,169,4027	1/1:1,8:9:27.07:325,27,0	0/0:29,0:29:87.29:0,87,1931	0/0:21,0:21:58.44:0,58,1321	0/0:40,0:40:99:0,120,2873	0/0:24,0:24:72.23:0,72,1676	0/0:23,0:23:69.24:0,69,1664	0/0:26,0:26:78.27:0,78,1863	0/0:23,0:23:69.22:0,69,1648	0/0:30,0:30:90.30:0,90,2134	0/0:22,0:22:66.23:0,66,1623	0/0:16,0:16:48.16:0,48,1158	0/0:18,0:18:54.19:0,54,1284	0/0:24,0:24:72.25:0,72,1748	1/1:4,20:24:71.72:910,72,0	0/0:18,0:18:54.19:0,54,1330	0/0:31,0:31:90.26:0,90,2046	0/0:26,0:26:78.17:0,78,1749	0/0:24,0:24:72.23:0,72,1652	0/0:23,0:23:69.24:0,69,1700	0/0:33,0:33:96.31:0,96,2316	0/0:20,0:20:60.21:0,60,1473	0/0:21,0:21:63.22:0,63,1553	0/0:19,0:19:57.20:0,57,1378	0/0:23,0:23:69.24:0,69,1701	0/0:37,0:37:99:0,111,2687	0/0:28,0:28:84.29:0,84,1979	0/0:9,0:9:27.09:0,27,664
chr10	100719467	.	AT	A	712.71	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.393;DP=699;FS=1.374;HRun=2;HaplotypeScore=75.0419;InbreedingCoeff=0.9994;MQ=89.10;MQ0=0;MQRankSum=-2.032;QD=19.80;ReadPosRankSum=-0.699;VQSLOD=3.4003;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,160,2540	1/1:2,8:10:29.58:223,30,0	0/0:31,0:31:90.28:0,90,1365	0/0:22,0:22:51.22:0,51,876	0/0:39,0:39:99:0,117,1845	0/0:24,0:24:72.25:0,72,1151	0/0:22,0:22:66.21:0,66,1029	0/0:24,0:24:72.25:0,72,1144	0/0:24,0:24:72.23:0,72,1125	0/0:27,0:27:81.27:0,81,1273	0/0:22,0:22:66.23:0,66,1053	0/0:17,0:17:51.17:0,51,813	0/0:19,0:19:57.18:0,57,885	0/0:26,0:26:78.25:0,78,1216	1/1:6,20:26:72.20:611,72,0	0/0:19,0:19:57.19:0,57,910	0/0:30,0:30:87.25:0,87,1337	0/0:23,0:23:66.23:0,66,1055	0/0:20,0:20:60.20:0,60,946	0/0:26,0:26:78.27:0,78,1234	0/0:35,0:35:99:0,105,1663	0/0:22,0:22:66.22:0,66,1049	0/0:22,0:22:66.21:0,66,1032	0/0:17,0:17:51.17:0,51,809	0/0:24,0:24:72.23:0,72,1129	0/0:37,0:37:99:0,111,1772	0/0:28,0:28:84.29:0,84,1334	0/0:10,0:10:30.07:0,30,452
chr10	100719634	.	C	CT	6340.18	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-17.386;DP=719;FS=16.452;HRun=9;HaplotypeScore=70.2962;InbreedingCoeff=0.9987;MQ=87.34;MQ0=1;MQRankSum=-1.014;QD=24.29;ReadPosRankSum=-2.000;VQSLOD=3.3761;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:49:99:0,137,1152	0/0:8,0:8:20.98:0,21,179	0/0:25,0:25:47.96:0,48,417	0/0:29,0:29:29.98:0,30,353	0/0:35,0:35:98.98:0,99,859	1/1:2,23:25:60.16:664,60,0	1/1:5,16:21:22.07:472,22,0	1/1:5,23:28:37.11:637,37,0	0/0:26,0:27:77.02:0,77,657	0/0:25,0:25:62.97:0,63,547	0/0:30,0:30:77.46:0,77,672	0/0:20,0:20:56.99:0,57,495	0/0:24,0:23:56.96:0,57,491	0/0:25,0:25:68.93:0,69,586	0/0:35,0:35:83.97:0,84,729	1/1:5,20:25:54.15:597,54,0	0/0:19,0:19:47.98:0,48,416	0/0:14,0:14:41.99:0,42,365	1/1:10,17:28:53.98:578,54,0	1/1:5,29:34:58.21:870,58,0	1/1:3,21:24:57.15:631,57,0	0/0:29,0:29:80.97:0,81,703	0/0:28,0:28:77.95:0,78,671	0/0:22,0:22:59.96:0,60,516	0/0:14,0:14:32.97:0,33,286	1/1:4,24:28:46.23:729,46,0	1/1:5,31:36:75.20:830,75,0	1/1:1,11:12:30.08:332,30,0
chr10	100720176	.	G	GGA	408.61	PASS	AB=0.948;AC=15;AF=0.300;AN=50;BaseQRankSum=2.279;DP=232;FS=24.673;HRun=0;HaplotypeScore=63.5496;InbreedingCoeff=0.0446;MQ=30.92;MQ0=40;MQRankSum=-3.795;QD=3.78;ReadPosRankSum=-1.309;VQSLOD=0.4207;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,1:6:5.73:50,0,6	0/0:6,0:6:10.32:0,10,114	./.	0/1:20,0:1:0:0,0,0	0/0:10,0:8:15.94:0,16,234	0/1:5,1:5:6.25:6,0,43	0/1:7,1:4:26.06:26,0,30	0/1:12,2:10:17.80:314,0,18	0/0:15,0:12:16.70:0,17,265	0/0:9,0:8:21.06:0,21,309	0/0:8,0:8:17.32:0,17,217	0/0:8,0:7:4.56:0,5,40	0/0:6,0:5:15.05:0,15,231	1/1:8,0:7:0.89:2,1,0	0/0:10,0:10:14.60:0,15,164	0/1:7,0:7:22.34:22,0,31	0/0:15,0:12:27.05:0,27,407	0/0:13,0:11:23.72:0,24,324	0/1:7,0:5:46.87:65,0,47	0/0:3,0:2:3.01:0,3,37	0/1:11,0:9:11.37:11,0,40	./.	./.	1/1:8,2:7:3.31:15,3,0	0/0:10,0:9:14.21:0,14,171	0/1:5,0:3:10.88:11,0,35	0/0:4,0:3:6.02:0,6,75	1/1:1,1:1:2.98:21,3,0
chr10	100720206	.	GAC	G	332.62	PASS	AB=0.979;AC=25;AF=0.521;AN=48;BaseQRankSum=6.172;DP=267;FS=0.000;HRun=0;HaplotypeScore=57.5978;InbreedingCoeff=0.2522;MQ=29.07;MQ0=57;MQRankSum=-3.599;QD=2.04;ReadPosRankSum=-4.365;VQSLOD=0.2705;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:10:3.35:16,3,0	1/1:6,0:5:6.46:63,6,0	./.	0/0:15,0:1:1.82:0,2,5	0/0:14,0:10:5.98:0,6,114	1/1:12,0:9:4.15:22,4,0	1/1:14,0:11:5.41:44,5,0	1/1:16,0:14:0.42:92,0,0	0/0:15,0:11:9.03:0,9,173	0/1:14,0:12:7.93:8,0,384	0/0:7,0:7:5.87:0,6,115	0/0:6,0:4:1.85:0,2,5	0/0:8,0:5:3.98:0,4,157	1/1:3,1:2:5.92:38,6,0	1/1:5,1:5:3:25,3,0	1/1:2,1:3:6.02:75,6,0	0/0:19,0:13:24.47:0,24,411	0/1:16,0:12:8.05:8,0,257	0/1:8,0:5:2.58:3,0,29	./.	0/1:13,0:10:0:0,0,0	./.	./.	0/1:11,0:5:0:0,0,0	0/0:14,0:8:9.03:0,9,172	0/1:10,0:6:21.44:35,0,21	1/1:5,0:4:2.80:13,3,0	0/1:10,1:3:6.24:29,0,6
chr10	100720246	.	CAGAG	C	533.70	PASS	AB=1.000;AC=12;AF=0.261;AN=46;BaseQRankSum=3.378;DP=292;FS=3.477;HRun=0;HaplotypeScore=71.4063;InbreedingCoeff=0.4839;MQ=35.81;MQ0=59;MQRankSum=0.438;QD=5.62;ReadPosRankSum=0.169;VQSLOD=1.1842;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:13:5.26:0,5,24	./.	./.	./.	0/0:11,0:7:3.48:0,3,39	0/1:18,0:12:2.99:39,0,3	1/1:15,0:14:6.21:68,6,0	0/0:17,0:11:11.86:0,12,83	0/0:11,0:8:0:0,0,0	0/0:8,0:7:8.99:0,9,114	0/0:6,0:6:3.06:0,3,8	0/0:6,0:4:0.94:0,1,2	0/0:11,0:8:5.52:0,6,77	0/0:9,0:8:8.92:0,9,64	0/0:10,0:9:11.39:0,11,58	1/1:4,0:4:8.95:88,9,0	0/0:21,0:16:11.89:0,12,120	0/0:14,0:10:12:0,12,177	0/1:11,0:7:0.74:69,0,1	./.	0/0:16,0:9:2.08:0,2,7	0/0:3,0:3:2.92:0,3,18	0/0:3,0:2:0.74:0,1,18	./.	0/0:14,0:8:0.47:0,0,1	1/1:6,15:18:25.60:316,26,0	1/1:9,0:8:10.77:84,11,0	1/1:17,0:4:0.45:1,0,0
chr10	100720475	.	T	TTCAG	691.80	PASS	AB=0.986;AC=21;AF=0.375;AN=56;BaseQRankSum=4.481;DP=600;FS=10.350;HRun=0;HaplotypeScore=314.0485;InbreedingCoeff=-0.0214;MQ=35.08;MQ0=10;MQRankSum=-1.762;QD=1.82;ReadPosRankSum=-0.204;VQSLOD=0.9789;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:38,2:38:33.16:78,0,33	0/1:9,0:9:1.92:15,0,2	0/0:18,0:7:17.62:0,18,202	0/0:19,0:4:2.74:0,3,16	0/0:18,0:18:2.71:0,3,58	1/1:12,0:11:5.75:67,6,0	0/1:16,0:16:16.94:17,0,25	0/1:29,1:28:99:257,0,120	0/1:34,0:33:1.25:1,0,82	0/0:26,0:26:31.71:0,32,517	0/0:15,0:15:0.16:0,0,109	0/1:25,2:27:19.35:115,0,19	0/0:24,0:24:16.76:0,17,206	1/1:22,1:23:5.25:19,5,0	0/1:34,0:33:11.79:12,0,104	0/1:24,0:24:12.95:17,0,13	0/0:16,0:15:16.84:0,17,268	0/0:9,0:9:16.54:0,17,178	0/1:21,0:18:59.26:59,0,116	1/1:15,0:14:1.74:6,2,0	0/0:28,0:27:0.34:0,0,7	0/1:19,0:19:0.28:118,0,0	0/1:28,0:28:5.93:46,0,6	0/1:26,1:27:0.43:0,0,0	0/1:18,0:18:4.33:4,0,89	0/0:26,0:25:2.75:0,3,181	0/0:20,0:20:15.12:0,15,101	1/1:3,0:3:1.55:4,2,0
chr10	100720478	.	AACAC	A	563.20	PASS	AB=0.830;AC=18;AF=0.321;AN=56;BaseQRankSum=5.340;DP=656;FS=0.861;HRun=0;HaplotypeScore=306.1616;InbreedingCoeff=-0.1221;MQ=35.66;MQ0=12;MQRankSum=-0.224;QD=1.41;ReadPosRankSum=-0.211;VQSLOD=1.9681;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,13:38:58.07:58,0,160	0/0:5,0:9:12.17:0,12,168	0/0:24,0:7:21.07:0,21,408	0/0:22,0:4:8.99:0,9,146	0/0:19,0:21:11.27:0,11,194	0/1:8,0:13:17.74:18,0,21	0/1:7,0:19:14.88:77,0,15	0/1:20,0:31:79.17:79,0,382	0/0:32,0:34:53.15:0,53,760	0/1:28,0:30:54.80:55,0,1164	0/0:16,0:16:14.43:0,14,309	0/1:15,9:29:11.20:81,0,11	0/0:24,0:27:18.36:0,18,885	0/1:7,14:24:6.79:18,0,7	0/0:16,0:33:28.68:0,29,431	0/1:11,0:25:5.30:51,0,5	0/0:16,0:15:29.83:0,30,582	0/0:8,0:9:1.35:0,1,143	0/1:14,0:20:7.89:8,0,287	1/1:8,0:18:6.78:62,7,0	0/1:19,0:31:9.02:30,0,9	0/0:14,8:23:11.12:0,11,54	0/1:21,8:31:33.38:33,0,45	0/1:5,22:27:0.05:1,0,0	0/0:19,0:20:29.57:0,30,491	0/1:15,0:29:99:113,0,263	0/1:8,0:21:30.04:30,0,56	1/1:0,0:3:1.55:4,2,0
chr10	100720480	.	C	CCAT	968.05	PASS	AB=0.964;AC=19;AF=0.339;AN=56;BaseQRankSum=6.025;DP=701;FS=18.541;HRun=0;HaplotypeScore=362.8611;InbreedingCoeff=-0.2349;MQ=35.63;MQ0=12;MQRankSum=-2.031;QD=2.11;ReadPosRankSum=2.056;VQSLOD=0.8437;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,1:38:12.36:12,0,67	0/1:11,0:11:12.90:24,0,13	0/0:24,0:7:21.07:0,21,371	0/0:24,0:6:8.71:0,9,124	0/0:26,0:26:2.86:0,3,119	0/1:13,1:13:14.15:14,0,29	0/1:18,1:21:12.28:33,0,12	0/1:29,4:32:99:286,0,208	0/0:36,0:35:34.05:0,34,408	0/1:38,0:38:98.23:98,0,867	0/1:18,0:18:10.91:11,0,166	0/1:29,1:30:5.98:6,0,25	0/0:25,0:27:26.47:0,26,467	0/1:22,1:24:3.95:4,0,6	0/1:32,0:33:7.14:7,0,75	1/1:24,1:25:9.33:69,9,0	0/0:17,0:16:29.35:0,29,371	0/1:10,0:10:4.33:4,0,194	0/1:20,3:20:99:221,0,119	0/1:21,0:21:4.25:4,0,6	0/1:35,0:34:21.22:21,0,26	0/0:23,0:23:5.99:0,6,64	0/0:32,0:32:11.68:0,12,57	0/1:27,0:27:0:0,0,0	0/0:30,0:30:20.34:0,20,239	0/1:24,6:29:99:296,0,149	0/1:21,0:21:2.39:2,0,35	0/0:3,0:3:2.50:0,2,9
chr10	100720483	.	AC	A	803.63	PASS	AB=0.929;AC=12;AF=0.214;AN=56;BaseQRankSum=5.640;DP=748;FS=5.475;HRun=1;HaplotypeScore=352.8171;InbreedingCoeff=0.2280;MQ=37.06;MQ0=13;MQRankSum=-2.487;QD=3.51;ReadPosRankSum=0.629;VQSLOD=-0.6374;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:38:31.66:0,32,416	0/0:12,0:12:18.29:0,18,234	0/0:28,0:10:27.09:0,27,410	0/0:27,0:7:15.04:0,15,200	0/0:26,0:26:7.89:0,8,178	0/1:10,4:13:9.77:10,0,29	0/1:21,2:23:46.41:121,0,46	0/1:36,1:35:99:209,0,269	0/0:37,0:36:43.93:0,44,657	0/0:42,0:42:67.12:0,67,1209	0/0:19,0:19:1.13:0,1,241	0/0:30,0:30:26.89:0,27,290	0/0:27,0:28:33.64:0,34,804	0/0:25,0:25:47.12:0,47,480	0/0:35,0:34:33.07:0,33,529	0/1:24,2:26:17.25:62,0,17	0/0:17,0:16:30.04:0,30,468	0/0:10,0:10:26.94:0,27,327	0/1:26,0:22:87.11:87,0,204	1/1:25,3:27:17.61:123,18,0	1/1:34,2:35:7.26:91,7,0	0/0:24,0:24:25.46:0,25,184	0/0:35,0:35:16.73:0,17,175	0/0:29,0:29:13.94:0,14,145	0/0:32,0:32:34.32:0,34,541	0/1:34,1:34:99:233,0,221	0/0:22,0:22:12.40:0,12,130	1/1:4,0:4:0.37:22,0,0
chr10	100720484	.	C	CA	1528.18	PASS	AB=0.844;AC=12;AF=0.214;AN=56;BaseQRankSum=4.443;DP=756;FS=4.528;HRun=1;HaplotypeScore=354.9058;InbreedingCoeff=0.1201;MQ=38.18;MQ0=14;MQRankSum=-0.726;QD=5.97;ReadPosRankSum=-0.253;VQSLOD=-0.0169;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:42.84:0,43,387	0/0:12,0:12:9.71:0,10,215	0/0:27,0:10:27.09:0,27,348	0/0:30,0:10:17.51:0,18,188	0/0:23,0:26:9.63:0,10,163	0/1:12,2:13:32.91:33,0,37	0/1:19,4:24:25.13:169,0,25	0/1:30,6:35:99:349,0,216	0/0:35,0:37:43.54:0,44,510	0/0:42,0:42:56.44:0,56,924	0/0:19,0:19:7.33:0,7,205	0/0:27,0:30:36.82:0,37,340	0/0:27,0:28:45.91:0,46,679	0/0:25,0:25:47.61:0,48,488	0/0:31,0:34:33.06:0,33,552	0/1:18,5:26:27.30:46,0,27	0/0:16,0:16:27.32:0,27,382	0/0:10,0:10:25.89:0,26,235	0/1:20,5:22:99:276,0,145	1/1:17,10:27:11.49:169,11,0	1/1:25,10:35:10.03:129,10,0	0/1:25,0:25:25.53:26,0,135	0/0:35,0:35:2.47:0,2,155	0/0:30,0:30:13.83:0,14,145	0/0:30,0:32:16.94:0,17,438	0/1:25,8:34:99:471,0,192	0/0:20,0:22:1.49:0,1,87	0/1:2,2:4:2.20:16,0,2
chr10	100720498	.	CT	C	2765.89	PASS	AB=0.815;AC=21;AF=0.375;AN=56;BaseQRankSum=16.809;DP=887;FS=50.625;HRun=1;HaplotypeScore=402.4272;InbreedingCoeff=-0.5951;MQ=42.90;MQ0=17;MQRankSum=-10.806;QD=4.33;ReadPosRankSum=4.999;VQSLOD=-0.2433;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:36,4:39:37.91:38,0,446	0/1:12,3:15:99:135,0,221	0/0:41,0:20:45.29:0,45,742	0/0:42,0:18:41.68:0,42,565	0/1:23,12:35:66.30:66,0,286	0/1:10,4:13:35.71:36,0,150	0/1:24,3:27:5.71:6,0,599	0/1:42,5:43:72.06:72,0,1200	0/1:37,5:42:76.78:77,0,743	0/1:40,11:51:99:491,0,1004	0/1:22,4:26:99:102,0,346	0/1:28,10:39:25.28:25,0,750	0/1:27,5:32:61.28:61,0,880	0/0:26,6:32:9.49:0,9,819	0/0:28,7:35:18.11:0,18,752	0/1:16,5:22:99:138,0,460	0/0:18,1:18:36.59:0,37,549	0/1:9,0:9:18.26:18,0,219	0/1:18,9:24:99:170,0,378	0/1:23,7:30:99:150,0,501	0/0:37,4:42:26.60:0,27,660	0/1:18,12:30:99:187,0,268	0/1:23,19:41:99:245,0,401	0/0:31,2:33:25.09:0,25,419	0/1:25,14:39:99:279,0,559	0/1:26,12:37:99:477,0,623	0/1:20,4:24:99:121,0,254	0/1:4,2:7:32.71:33,0,132
chr10	100720519	.	AT	A	1381.42	PASS	AB=0.789;AC=18;AF=0.321;AN=56;BaseQRankSum=17.478;DP=1057;FS=117.692;HRun=1;HaplotypeScore=449.7948;InbreedingCoeff=-0.4359;MQ=45.51;MQ0=10;MQRankSum=-13.427;QD=2.27;ReadPosRankSum=2.116;VQSLOD=-0.4770;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:39,6:43:5.70:6,0,791	0/1:13,5:20:56.88:57,0,399	0/0:48,0:29:69.58:0,70,1089	0/0:71,2:40:64.02:0,64,1132	0/0:28,14:42:19.21:0,19,467	0/1:10,7:17:33.47:33,0,217	0/1:29,9:38:15.46:15,0,1020	0/0:42,2:42:82.27:0,82,1850	0/1:40,9:48:35.34:35,0,1152	0/1:35,20:56:99:349,0,1145	0/1:21,9:30:56.44:56,0,574	0/0:37,9:46:57.07:0,57,1167	0/1:25,5:30:4.10:4,0,920	0/0:33,0:33:55.53:0,56,907	0/1:36,10:45:0.79:1,0,1154	0/1:19,8:28:42.67:43,0,744	0/0:19,2:20:21.35:0,21,751	0/1:7,3:10:40.61:41,0,234	0/1:17,8:23:97.80:98,0,632	0/1:28,8:35:90.33:90,0,676	0/0:55,1:54:92.37:0,92,1524	0/0:41,3:44:7.69:0,8,852	0/1:39,11:49:6.30:6,0,804	0/0:39,1:40:63.23:0,63,983	0/1:36,10:45:93.71:94,0,989	0/1:24,18:43:99:381,0,894	0/1:16,9:26:99:137,0,371	0/1:8,4:12:87.72:88,0,301
chr10	100720548	.	AC	A	951.88	PASS	AB=0.861;AC=9;AF=0.161;AN=56;BaseQRankSum=17.228;DP=1251;FS=177.853;HRun=2;HaplotypeScore=424.3152;InbreedingCoeff=-0.1773;MQ=44.62;MQ0=45;MQRankSum=-12.714;QD=2.80;ReadPosRankSum=-5.731;VQSLOD=-0.5277;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:46:78.76:0,79,1382	0/1:21,3:24:16.89:17,0,401	0/0:85,0:16:42.11:0,42,557	0/0:97,0:30:64.07:0,64,832	0/0:40,6:45:34.03:0,34,955	0/1:23,5:27:7.37:7,0,737	0/0:39,4:42:66.80:0,67,1304	0/0:48,0:46:99:0,119,1701	0/0:48,0:47:58.16:0,58,1603	0/1:54,4:53:99:275,0,1141	0/1:32,4:35:1.58:2,0,624	0/0:49,0:48:84.85:0,85,1641	0/0:33,2:34:60.21:0,60,1063	0/0:33,0:33:70.96:0,71,996	0/0:50,2:51:25.52:0,26,1452	0/0:31,2:33:31.73:0,32,1115	0/0:25,0:24:68.92:0,69,1003	0/0:16,0:16:39.10:0,39,555	0/0:45,2:39:35.77:0,36,1052	0/1:24,13:35:63.67:64,0,771	0/0:67,0:65:99:0,133,1997	0/0:47,0:47:45.48:0,45,1134	0/0:48,0:48:18.64:0,19,941	0/0:43,0:43:96.33:0,96,1295	0/1:50,6:55:88.55:89,0,1240	0/1:43,13:55:99:378,0,1298	0/1:21,6:27:99:145,0,390	0/1:16,2:17:99:109,0,476
chr10	100720554	.	AACAC	A	1910.07	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.966;DP=1251;FS=29.847;HRun=0;HaplotypeScore=406.3829;InbreedingCoeff=0.9813;MQ=45.03;MQ0=59;MQRankSum=-3.190;QD=27.29;ReadPosRankSum=0.221;VQSLOD=2.8541;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:99:0,120,2649	1/1:12,9:21:17.60:441,18,0	0/0:91,0:12:15.02:0,15,223	0/0:102,0:29:27.92:0,28,312	0/0:47,0:46:84.01:0,84,1882	0/0:31,0:30:67.46:0,67,1719	0/0:42,0:41:73.78:0,74,1659	0/0:48,0:45:95.98:0,96,2029	0/0:50,0:49:94.40:0,94,2784	0/0:56,0:50:33.34:0,33,1942	0/0:33,0:32:41.96:0,42,1153	0/0:53,0:52:99:0,120,2869	0/0:28,0:27:63.69:0,64,1514	0/0:31,0:31:62.20:0,62,1469	1/1:17,32:48:88.81:1589,89,0	0/0:31,0:31:63.13:0,63,1412	0/0:27,0:26:64.75:0,65,1568	0/0:17,0:17:42.04:0,42,929	0/0:45,1:37:16.98:0,17,1322	0/0:40,0:38:52.16:0,52,1229	0/0:71,0:70:99:0,156,3633	0/0:44,0:44:97.40:0,97,2190	0/0:40,0:40:70.93:0,71,1540	0/0:44,0:44:97.87:0,98,2223	0/0:55,0:55:33.74:0,34,2346	0/0:57,0:56:99:0,133,2562	0/0:24,0:25:36.50:0,36,742	0/0:16,0:16:40.85:0,41,835
chr10	100720939	.	T	TC	17002.18	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-14.558;DP=666;FS=5.383;HRun=2;HaplotypeScore=60.2167;InbreedingCoeff=0.9954;MQ=77.82;MQ0=0;MQRankSum=-1.886;QD=43.82;ReadPosRankSum=0.248;VQSLOD=4.2499;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:87.30:1391,87,0	0/0:11,0:11:33.11:0,33,461	0/0:18,0:18:50.45:0,50,624	0/0:17,0:16:23.25:0,23,528	0/0:32,0:32:93.31:0,93,1299	1/1:0,16:17:51.11:785,51,0	1/1:0,18:18:51.17:814,51,0	1/1:1,21:22:63.20:984,63,0	0/0:32,0:32:96.32:0,96,1342	0/0:26,0:26:72.24:0,72,994	0/0:29,0:29:87.26:0,87,1197	1/1:0,19:19:57.19:911,57,0	0/0:20,0:20:60.20:0,60,839	1/1:0,27:27:75.26:1197,75,0	0/0:17,0:17:51.17:0,51,713	1/1:3,20:23:12.17:772,12,0	0/0:23,0:23:69.23:0,69,965	0/0:16,0:16:48.08:0,48,628	1/1:1,20:21:60.20:959,60,0	1/1:2,23:25:57.19:911,57,0	1/1:0,40:40:99:1775,111,0	1/1:0,27:27:72.25:1151,72,0	1/1:1,22:23:63.21:1006,63,0	1/1:0,19:19:51.17:815,51,0	0/0:37,0:37:99:0,111,1551	1/1:1,38:38:75.45:1756,75,0	1/1:0,21:21:60.20:959,60,0	1/1:0,17:17:51.17:815,51,0
chr10	100721072	.	CTGTGTGTGTGTGTATGTGTG	C	4543.06	PASS	AB=0.951;AC=23;AF=0.411;AN=56;BaseQRankSum=2.185;DP=533;FS=2.616;HRun=0;HaplotypeScore=263.1704;InbreedingCoeff=0.2967;MQ=67.48;MQ0=5;MQRankSum=-0.904;QD=15.72;ReadPosRankSum=0.696;VQSLOD=3.4948;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:24:66.70:67,0,527	0/0:10,0:10:27.02:0,27,1405	0/0:22,0:14:10.47:0,10,206	0/0:26,0:16:26.20:0,26,466	0/0:31,0:31:75.14:0,75,4323	1/1:12,1:13:14.94:254,15,0	1/1:11,1:13:24.02:514,24,0	0/1:24,0:23:62.27:387,0,62	0/0:23,0:24:40.10:0,40,2726	0/0:22,0:22:39.12:0,39,2398	0/0:15,0:15:27.06:0,27,1834	0/1:18,0:18:99:176,0,974	0/0:15,0:15:40.92:0,41,1436	0/1:18,0:18:53.98:54,0,1559	0/0:17,0:17:30.03:0,30,976	1/1:3,7:10:9.03:489,9,0	0/0:16,0:16:39.05:0,39,2188	0/0:24,0:24:54.11:0,54,3193	1/1:5,9:13:26.91:369,27,0	1/1:5,11:16:6.02:326,6,0	1/1:34,0:33:26.61:219,27,0	0/1:12,0:12:48.82:49,0,796	0/1:17,0:17:36.81:37,0,1459	0/1:25,0:25:80.84:81,0,2408	0/0:22,0:22:44.90:0,45,2929	0/1:5,19:24:11.15:1161,0,11	1/1:2,14:16:8.53:322,9,0	0/1:9,0:9:38.91:39,0,40
chr10	100721084	.	GTA	G	3726.25	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=6.279;DP=527;FS=1.235;HRun=0;HaplotypeScore=103.8414;InbreedingCoeff=0.6145;MQ=58.78;MQ0=11;MQRankSum=-2.667;QD=10.83;ReadPosRankSum=-0.879;VQSLOD=3.3720;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:20:24.13:249,24,0	0/1:11,0:11:17.13:17,0,94	0/0:15,0:8:10.41:0,10,125	0/0:23,0:13:26.12:0,26,276	0/0:37,0:36:39.26:0,39,811	1/1:10,0:10:14.87:110,15,0	1/1:13,0:13:25.09:187,25,0	1/1:20,0:18:53.78:432,54,0	0/0:26,0:26:25.33:0,25,574	0/1:24,0:24:14.02:14,0,375	0/0:15,0:15:35.66:0,36,403	1/1:19,0:19:42.41:361,42,0	0/1:19,0:19:81.19:81,0,143	1/1:17,1:18:37.95:369,38,0	0/0:19,0:19:4.09:0,4,177	1/1:7,0:7:8.83:53,9,0	0/0:17,0:17:27.76:0,28,408	0/0:30,0:30:10.03:0,10,584	1/1:11,0:9:23.86:185,24,0	1/1:12,0:12:5.88:35,6,0	1/1:30,0:26:26.81:219,27,0	1/1:16,0:16:25.56:216,26,0	1/1:15,1:16:32.59:356,33,0	1/1:28,2:30:29.49:462,29,0	0/1:25,0:25:10.94:11,0,566	1/1:21,1:21:19.82:272,20,0	1/1:14,0:14:8.20:45,8,0	1/1:5,0:5:7.54:52,8,0
chr10	100721086	.	ATG	A	484.03	PASS	AB=0.992;AC=25;AF=0.543;AN=46;BaseQRankSum=6.768;DP=523;FS=0.694;HRun=0;HaplotypeScore=113.9348;InbreedingCoeff=0.3593;MQ=55.93;MQ0=12;MQRankSum=-1.234;QD=1.98;ReadPosRankSum=3.058;VQSLOD=1.8296;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:2.56:0,3,12	1/1:7,4:11:12.03:127,12,0	./.	./.	0/0:37,0:36:16.88:0,17,561	1/1:9,0:9:2.74:12,3,0	1/1:13,0:13:6.93:31,7,0	./.	0/1:22,1:24:21.67:22,0,470	0/0:25,0:25:33.39:0,33,312	0/0:15,0:15:24.07:0,24,322	0/1:18,0:18:9.61:10,0,38	1/1:16,0:20:8.09:113,8,0	0/1:19,0:19:7.48:7,0,75	1/1:13,8:21:5.87:58,6,0	1/1:7,0:7:8.52:42,9,0	0/0:18,0:18:25.79:0,26,292	0/0:31,0:31:6.06:0,6,441	1/1:11,0:9:2.41:9,2,0	1/1:11,0:11:5.68:28,6,0	./.	0/0:16,0:16:6.43:0,6,45	0/1:15,0:15:36.53:53,0,37	0/1:29,0:29:33.90:34,0,139	0/0:24,0:24:28.78:0,29,400	1/1:22,0:21:17.04:83,17,0	1/1:14,0:14:4.09:17,4,0	./.
chr10	100721171	.	G	GT	2479.78	PASS	AB=0.877;AC=28;AF=0.500;AN=56;BaseQRankSum=5.359;DP=511;FS=4.240;HRun=9;HaplotypeScore=92.4652;InbreedingCoeff=0.6721;MQ=68.08;MQ0=4;MQRankSum=-2.404;QD=10.25;ReadPosRankSum=-0.400;VQSLOD=2.7123;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:27:75.50:769,76,0	0/0:6,0:6:18:0,18,156	0/0:47,0:23:28.29:0,28,213	0/0:50,0:24:2.64:0,3,149	0/0:22,2:24:20.78:0,21,409	1/1:11,0:11:7.06:25,7,0	1/1:15,0:14:19.01:75,19,0	1/1:21,0:20:7.76:40,8,0	0/0:17,0:17:35.97:0,36,311	0/0:18,0:18:44.94:0,45,381	0/0:12,0:12:35.99:0,36,313	1/1:2,14:17:11.60:343,12,0	0/0:19,0:19:44.98:0,45,390	1/1:2,9:11:18.05:196,18,0	0/1:13,1:14:0.20:0,0,227	1/1:10,0:10:12.70:49,13,0	0/0:30,0:30:80.96:0,81,703	0/0:25,0:25:71.98:0,72,625	1/1:14,0:14:0.17:9,0,0	0/1:11,0:11:0.78:7,0,1	1/1:15,0:15:10.14:34,10,0	1/1:1,9:10:27.03:284,27,0	1/1:2,10:12:33.02:347,33,0	0/1:6,17:23:30.13:383,0,30	0/0:19,0:19:47.98:0,48,416	0/1:16,0:15:4.12:91,0,4	1/1:15,0:14:7.28:24,7,0	0/0:2,0:2:0:0,0,0
chr10	100721180	.	TG	T	2332.38	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=10.553;DP=496;FS=1.917;HRun=1;HaplotypeScore=85.3344;InbreedingCoeff=0.8336;MQ=67.84;MQ0=2;MQRankSum=-6.372;QD=12.89;ReadPosRankSum=-3.783;VQSLOD=1.1863;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:62.92:0,63,499	0/0:6,0:6:18.06:0,18,245	0/0:28,3:15:6.20:0,6,283	0/1:37,0:20:4.75:5,0,239	0/0:23,0:23:69.08:0,69,831	1/1:9,3:13:36.70:292,37,0	1/1:0,9:14:26.97:265,27,0	1/1:0,8:17:38.58:281,39,0	0/0:15,0:15:45.12:0,45,577	0/0:20,0:20:60.12:0,60,712	0/0:15,0:15:45.11:0,45,552	0/0:17,0:17:34.81:0,35,276	0/0:18,0:18:54.15:0,54,699	0/0:10,0:10:16.31:0,16,101	0/0:16,0:16:45.03:0,45,537	1/1:6,5:12:32.59:305,33,0	0/0:34,0:34:99:0,99,1225	0/0:26,0:26:78.21:0,78,1012	1/1:0,7:12:27.30:211,27,0	1/1:6,5:12:35.59:267,36,0	1/1:0,7:14:23.88:199,24,0	0/0:10,0:10:29.22:0,29,188	0/1:11,0:11:6.18:6,0,126	0/0:23,0:23:55.78:0,56,410	0/0:20,0:20:60.10:0,60,708	1/1:11,7:18:11.45:349,11,0	1/1:5,8:14:41.81:346,42,0	1/1:0,0:3:2.92:17,3,0
chr10	100721182	.	TTG	T	2353.79	PASS	AB=0.818;AC=19;AF=0.339;AN=56;BaseQRankSum=9.871;DP=501;FS=3.220;HRun=0;HaplotypeScore=94.8889;InbreedingCoeff=0.8986;MQ=68.33;MQ0=2;MQRankSum=-4.428;QD=17.97;ReadPosRankSum=-2.790;VQSLOD=2.9665;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.31:0,93,1595	0/0:7,0:7:21.07:0,21,360	0/0:29,0:14:14.31:0,14,496	0/0:38,1:22:17.39:0,17,418	0/0:23,0:23:69.23:0,69,1202	1/1:10,3:13:35.83:288,36,0	1/1:6,8:14:27.01:265,27,0	1/1:12,6:17:42.12:309,42,0	0/0:15,0:15:45.13:0,45,756	0/0:19,0:19:50.91:0,51,877	0/0:16,0:16:44.86:0,45,714	0/0:17,0:17:42.13:0,42,717	0/0:18,0:18:54.17:0,54,952	0/0:10,0:10:21.01:0,21,282	0/0:17,0:17:48.16:0,48,833	1/1:8,4:12:33:306,33,0	0/0:34,0:34:99:0,102,1770	0/0:26,0:26:75.13:0,75,1220	1/1:8,4:12:26.96:262,27,0	1/1:10,2:12:31.83:272,32,0	1/1:8,6:14:20.96:186,21,0	0/0:11,0:11:33.08:0,33,503	0/0:12,0:12:14.70:0,15,491	0/0:24,0:24:59.99:0,60,1005	0/0:21,0:21:60.20:0,60,1023	0/1:14,4:17:6.61:321,0,7	1/1:9,6:14:38.59:335,39,0	1/1:3,0:3:2.97:20,3,0
chr10	100721183	.	TG	T	2171.98	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=10.051;DP=493;FS=3.224;HRun=1;HaplotypeScore=85.9335;InbreedingCoeff=0.9394;MQ=68.93;MQ0=2;MQRankSum=-6.715;QD=16.71;ReadPosRankSum=-2.880;VQSLOD=3.0499;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.29:0,93,1315	0/0:7,0:7:21.07:0,21,297	0/0:24,1:14:13.20:0,13,368	0/0:39,0:23:15.14:0,15,354	0/0:24,0:24:72.18:0,72,972	1/1:13,0:13:35.79:287,36,0	1/1:13,1:14:26.91:251,27,0	1/1:16,2:17:42.36:295,42,0	0/0:16,0:16:48.11:0,48,642	0/0:17,0:17:50.91:0,51,714	0/0:15,0:15:44.87:0,45,597	0/0:16,0:16:42.12:0,42,576	0/0:18,0:18:54.17:0,54,768	0/0:10,0:10:19.28:0,19,222	0/0:17,0:17:48.14:0,48,672	1/1:11,1:12:32.93:295,33,0	0/0:34,0:34:99:0,102,1432	0/0:25,0:25:75.09:0,75,979	1/1:9,3:12:28.04:207,28,0	1/1:9,3:12:29.91:228,30,0	1/1:14,0:14:20.86:171,21,0	0/0:11,0:11:33.08:0,33,430	0/0:11,0:11:14.57:0,15,402	0/0:25,0:25:59.47:0,59,811	0/0:20,0:20:60.17:0,60,827	1/1:15,2:16:3.80:303,4,0	1/1:13,2:14:41.73:330,42,0	1/1:3,0:3:2.90:16,3,0
chr10	100724925	.	A	AT	5472.02	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=9.342;DP=558;FS=0.739;HRun=6;HaplotypeScore=62.0553;InbreedingCoeff=0.9978;MQ=83.31;MQ0=0;MQRankSum=-2.262;QD=33.57;ReadPosRankSum=1.695;VQSLOD=4.9985;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:72.23:906,72,0	1/1:1,7:8:18.06:226,18,0	0/0:20,0:20:51.09:0,51,505	0/0:13,0:14:29.84:0,30,280	0/0:25,0:25:75.15:0,75,758	0/0:31,0:31:84.17:0,84,850	0/0:15,0:15:36.08:0,36,367	0/0:20,0:20:48.09:0,48,485	0/0:14,0:14:36.06:0,36,360	0/0:21,0:21:63.14:0,63,643	0/0:22,0:22:63.11:0,63,628	1/1:2,18:20:54.17:679,54,0	0/0:17,0:17:45.10:0,45,459	1/1:1,16:17:42.13:528,42,0	1/1:2,23:25:69.22:868,69,0	0/0:16,0:16:45.10:0,45,459	0/0:25,0:25:66.14:0,66,673	0/0:21,0:21:42.04:0,42,412	0/0:15,0:15:39.09:0,39,398	0/0:27,0:27:72.14:0,72,725	0/0:13,0:13:33.07:0,33,337	1/1:1,17:18:51.16:642,51,0	1/1:1,30:31:87.28:1094,87,0	1/1:2,15:17:42.13:528,42,0	0/0:17,0:17:48.09:0,48,483	0/0:25,0:25:66.14:0,66,673	0/0:28,0:28:75.16:0,75,763	0/0:9,0:9:21.05:0,21,214
chr10	100726076	.	A	AC	1270.27	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=9.240;DP=519;FS=9.024;HRun=7;HaplotypeScore=79.3739;InbreedingCoeff=0.7050;MQ=79.61;MQ0=0;MQRankSum=-2.948;QD=9.14;ReadPosRankSum=3.981;VQSLOD=0.8030;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:56.37:224,56,0	1/1:0,6:6:12.04:145,12,0	0/0:13,0:13:22.37:0,22,225	0/0:19,0:19:48.47:0,48,375	0/0:36,0:36:96.09:0,96,901	0/0:23,0:23:63.10:0,63,608	0/0:11,0:11:24.03:0,24,232	0/0:23,0:23:51.04:0,51,478	0/0:13,0:13:39.06:0,39,376	0/0:22,0:22:48.06:0,48,460	0/0:34,0:34:96.11:0,96,909	1/1:10,0:10:2.72:67,3,0	0/0:18,0:18:54.07:0,54,515	1/1:11,0:11:2.04:71,2,0	1/1:3,17:20:45.14:544,45,0	0/0:16,0:16:45.04:0,45,420	0/0:23,0:23:63.07:0,63,596	0/0:10,0:10:30.02:0,30,282	0/0:18,0:18:45:0,45,416	0/0:23,0:23:66.07:0,66,622	0/0:13,0:13:39.05:0,39,372	0/1:24,0:24:61.35:113,0,61	0/1:29,0:29:9.93:164,0,10	1/1:15,0:15:31.04:119,31,0	0/0:16,0:16:48.06:0,48,454	0/0:15,0:15:39.05:0,39,372	0/0:33,0:33:96.14:0,96,920	0/0:1,0:1:3:0,3,29
chr10	100726083	.	C	CA	3158.84	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=2.786;DP=533;FS=6.442;HRun=7;HaplotypeScore=72.1994;InbreedingCoeff=0.8797;MQ=78.51;MQ0=0;MQRankSum=-1.255;QD=21.79;ReadPosRankSum=3.815;VQSLOD=3.6357;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:69.16:800,69,0	0/1:8,0:8:22.09:34,0,22	0/0:12,0:12:23.85:0,24,217	0/0:19,0:19:24.07:0,24,262	0/0:39,0:39:89.94:0,90,841	0/0:24,0:24:69.07:0,69,653	0/0:11,0:11:33.02:0,33,304	0/0:22,0:22:56.92:0,57,519	0/0:14,0:14:39.06:0,39,376	0/0:19,0:19:54.06:0,54,512	0/0:35,0:35:93.09:0,93,878	1/1:2,10:12:27.08:322,27,0	0/0:19,0:19:54.08:0,54,516	1/1:2,10:12:27.08:323,27,0	1/1:17,0:17:39.18:158,39,0	0/0:17,0:17:42.04:0,42,395	0/0:21,0:21:57.09:0,57,549	0/0:13,0:13:35.96:0,36,324	0/0:18,0:18:45.04:0,45,422	0/0:24,0:24:63.05:0,63,597	0/0:15,0:15:42.03:0,42,390	1/1:6,21:27:51.16:608,51,0	1/1:3,24:27:57.17:683,57,0	1/1:0,16:16:36.11:431,36,0	0/0:17,0:17:45.05:0,45,428	0/0:16,0:16:45.03:0,45,416	0/0:32,0:32:93.14:0,93,891	0/0:1,0:1:3:0,3,29
chr10	100726404	.	G	GAC	301.87	PASS	AB=0.953;AC=8;AF=0.143;AN=56;BaseQRankSum=10.192;DP=675;FS=1.983;HRun=0;HaplotypeScore=156.4565;InbreedingCoeff=0.0683;MQ=54.18;MQ0=22;MQRankSum=-8.632;QD=1.92;ReadPosRankSum=-7.489;VQSLOD=0.0883;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:45.39:0,45,788	1/1:7,3:10:10.58:128,11,0	0/0:15,0:5:10.58:0,11,127	0/0:31,0:17:24.42:0,24,301	0/0:27,0:27:63.18:0,63,829	0/0:20,0:20:7.01:0,7,275	0/0:22,0:22:14.84:0,15,432	0/0:38,0:35:84.27:0,84,1134	0/0:27,1:28:60.51:0,61,890	0/0:24,0:21:48.15:0,48,638	0/0:22,0:22:57.18:0,57,758	0/1:21,0:21:64.78:65,0,252	0/0:13,0:13:36.03:0,36,456	0/1:34,1:35:94.26:94,0,293	0/1:35,8:43:43.85:44,0,288	0/0:30,0:29:25.25:0,25,512	0/0:38,0:37:99:0,102,1372	0/0:18,0:18:5:0,5,424	0/0:31,0:24:51.11:0,51,639	0/1:17,0:16:23.68:24,0,235	0/0:23,1:20:42.14:0,42,576	0/0:23,1:24:15.13:0,15,376	0/1:16,2:18:7.51:8,0,147	0/0:32,0:32:32.92:0,33,563	0/0:17,0:16:42.14:0,42,569	0/1:13,0:13:75.48:75,0,223	0/0:18,0:18:21.56:0,22,517	0/0:2,0:2:3.01:0,3,41
chr10	100726406	.	CACAG	C	170.23	PASS	AB=0.977;AC=8;AF=0.143;AN=56;BaseQRankSum=6.918;DP=674;FS=6.443;HRun=0;HaplotypeScore=171.4666;InbreedingCoeff=0.0766;MQ=53.71;MQ0=25;MQRankSum=-4.471;QD=1.01;ReadPosRankSum=-3.783;VQSLOD=1.2939;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:44:65.81:0,66,1508	1/1:7,2:9:9.47:83,9,0	0/0:15,0:5:11.71:0,12,189	0/0:30,0:16:25.45:0,25,474	0/0:27,0:27:63.20:0,63,1504	0/1:20,0:20:8.40:8,0,438	0/1:21,0:21:34.10:34,0,820	0/0:37,0:34:87.29:0,87,1893	0/0:27,0:27:68.77:0,69,1695	0/0:25,0:21:57.16:0,57,1183	0/0:22,0:22:60.20:0,60,1372	0/0:21,0:21:18.81:0,19,577	0/0:13,0:13:35.86:0,36,803	0/1:31,3:34:18.08:18,0,587	0/1:42,1:43:88.68:89,0,614	0/1:27,1:27:25.01:25,0,887	0/0:40,0:39:99:0,108,2635	0/0:16,0:16:29.94:0,30,867	0/0:28,0:21:50.60:0,51,987	0/0:18,0:17:3.32:0,3,493	0/0:27,0:22:42.14:0,42,1051	0/0:24,0:24:35.76:0,36,764	0/0:17,1:18:17.95:0,18,307	0/0:32,0:32:44.97:0,45,1057	0/0:17,0:16:45.15:0,45,1120	0/1:14,0:14:47.65:48,0,446	0/0:19,0:19:25.88:0,26,1003	0/0:3,0:3:5.98:0,6,96
chr10	100726408	.	CAG	C	125.55	PASS	AB=0.978;AC=10;AF=0.179;AN=56;BaseQRankSum=8.250;DP=676;FS=11.195;HRun=0;HaplotypeScore=155.1073;InbreedingCoeff=0.0529;MQ=53.46;MQ0=25;MQRankSum=-3.268;QD=0.66;ReadPosRankSum=-2.954;VQSLOD=1.5308;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:43:62.63:0,63,1121	1/1:10,0:10:14.71:123,15,0	0/0:13,0:4:11.62:0,12,150	0/0:29,0:15:9.79:0,10,297	0/0:27,0:27:66.20:0,66,1200	0/1:21,0:21:6.36:6,0,380	0/1:18,1:19:57.60:58,0,594	0/0:37,0:34:89.08:0,89,1503	0/0:27,0:27:68.04:0,68,1291	0/0:24,0:20:57.18:0,57,999	0/0:22,0:22:58.42:0,58,1014	0/0:21,0:21:20.63:0,21,424	0/1:12,1:13:3.11:3,0,551	0/1:34,0:34:0.82:1,0,407	0/1:44,0:44:22.32:22,0,469	0/0:28,0:27:17.41:0,17,655	0/0:41,0:40:99:0,99,1966	0/1:16,1:17:10.44:10,0,621	0/0:28,0:21:55.56:0,56,840	0/1:19,0:18:8.85:9,0,361	0/0:29,0:24:42.13:0,42,776	0/0:24,0:24:33.01:0,33,554	0/0:18,0:18:16.45:0,16,236	0/0:33,0:33:23.83:0,24,774	0/0:17,0:16:45.15:0,45,849	0/1:14,0:14:28.07:28,0,366	0/0:18,1:19:14.01:0,14,734	0/0:3,0:3:5.98:0,6,78
chr10	100726410	.	G	GAC	630.80	PASS	AB=0.912;AC=11;AF=0.196;AN=56;BaseQRankSum=10.886;DP=675;FS=3.275;HRun=0;HaplotypeScore=159.2805;InbreedingCoeff=-0.0751;MQ=52.31;MQ0=25;MQRankSum=-7.415;QD=2.75;ReadPosRankSum=-7.288;VQSLOD=-0.1042;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,2:46:42.32:0,42,693	1/1:7,3:10:10.98:173,11,0	0/0:13,0:4:5.89:0,6,57	0/0:25,0:11:7.63:0,8,191	0/0:27,0:27:63.08:0,63,861	0/1:18,2:20:56.12:56,0,168	0/1:20,0:20:31.05:31,0,434	0/0:38,0:35:2.27:0,2,798	0/0:27,0:27:43.79:0,44,785	0/0:22,0:18:54.11:0,54,680	0/0:22,0:22:51.16:0,51,678	0/1:16,4:20:49.75:50,0,212	0/0:14,0:14:36.01:0,36,468	0/1:31,3:34:87.06:87,0,243	0/1:38,8:46:99:171,0,211	0/1:27,1:27:78.21:78,0,393	0/0:41,0:40:99:0,111,1449	0/0:17,0:17:33.89:0,34,453	0/0:26,0:19:35.49:0,35,430	0/1:18,1:18:35.97:36,0,229	0/0:29,0:24:39.10:0,39,501	0/0:19,5:24:12.13:0,12,348	0/1:13,5:18:10.54:11,0,93	0/0:32,1:33:8.19:0,8,468	0/0:18,0:17:45.15:0,45,615	0/1:14,0:14:86.89:87,0,174	0/0:18,1:19:19.91:0,20,525	0/0:3,0:3:5.97:0,6,59
chr10	100726424	.	GAC	G	387.93	PASS	AB=0.908;AC=13;AF=0.232;AN=56;BaseQRankSum=3.181;DP=663;FS=0.711;HRun=0;HaplotypeScore=158.0936;InbreedingCoeff=-0.1532;MQ=49.26;MQ0=18;MQRankSum=0.748;QD=1.25;ReadPosRankSum=-0.402;VQSLOD=2.4825;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:32,18:47:21.93:22,0,45	0/0:12,0:12:14.22:0,14,104	0/0:6,0:2:2.04:0,2,6	0/0:15,0:6:3.01:0,3,45	0/0:27,0:27:54.01:0,54,736	0/1:13,0:18:9.56:10,0,24	0/1:22,0:22:18.38:18,0,117	0/0:26,0:24:21.93:0,22,168	0/0:19,0:26:35.86:0,36,358	0/0:24,0:20:1.39:0,1,394	0/0:20,0:20:23.90:0,24,315	0/1:14,9:23:26.85:97,0,27	0/1:13,3:16:51.48:51,0,332	0/1:31,4:35:11.45:154,0,11	0/0:43,0:43:31.85:0,32,209	0/0:16,0:30:6.80:0,7,68	0/1:38,1:38:6.01:6,0,687	0/1:18,2:20:6.30:6,0,374	0/0:25,0:24:23.97:0,24,272	0/0:26,0:25:16.60:0,17,158	0/0:26,0:21:3:0,3,26	1/1:14,11:25:3.52:92,4,0	0/0:10,4:20:4.41:0,4,14	0/1:28,3:31:7.16:47,0,7	0/0:18,1:18:27.09:0,27,403	0/1:12,0:12:3.60:4,0,147	0/1:20,0:20:19.59:20,0,145	0/0:5,0:5:3.45:0,3,23
chr10	100726430	.	C	CAG	1506.32	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=9.998;DP=649;FS=0.443;HRun=0;HaplotypeScore=156.2451;InbreedingCoeff=0.6493;MQ=48.00;MQ0=16;MQRankSum=-0.072;QD=4.95;ReadPosRankSum=-0.548;VQSLOD=2.5988;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:46,3:46:43.73:369,44,0	1/1:1,10:12:9.88:272,10,0	0/0:5,0:1:2.04:0,2,6	0/0:12,0:6:14.97:0,15,170	0/0:26,0:26:66.09:0,66,841	0/1:19,0:19:15.88:16,0,57	0/0:20,0:20:13:0,13,229	0/0:25,0:22:64.28:0,64,422	0/1:24,0:24:99:130,0,233	0/0:28,0:24:62.84:0,63,677	0/0:22,0:22:57.02:0,57,629	1/1:19,6:25:8.57:117,9,0	0/0:16,0:16:39.05:0,39,494	1/1:13,21:34:22.64:143,23,0	1/1:5,37:42:11.69:292,12,0	0/1:28,0:27:19.23:19,0,100	0/0:40,0:39:99:0,111,1268	0/0:20,0:20:38.91:0,39,493	0/0:26,0:26:70.35:0,70,478	0/0:25,0:24:32.02:0,32,278	0/0:24,0:20:3.42:0,3,119	1/1:21,2:23:25.05:150,25,0	1/1:16,2:18:5.10:25,5,0	1/1:28,2:30:22.66:169,23,0	0/0:18,0:17:45.06:0,45,552	0/0:12,0:12:15.90:0,16,169	0/0:21,0:21:37.14:0,37,384	0/0:5,0:5:5.22:0,5,41
chr10	100726434	.	C	CACAG	594.60	PASS	AB=0.984;AC=17;AF=0.304;AN=56;BaseQRankSum=8.735;DP=644;FS=6.224;HRun=0;HaplotypeScore=178.1720;InbreedingCoeff=0.0697;MQ=47.76;MQ0=16;MQRankSum=-2.854;QD=1.68;ReadPosRankSum=-0.224;VQSLOD=2.3448;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:45,1:45:43.39:43,0,48	0/1:11,0:11:15.33:22,0,15	0/0:6,0:2:0.89:0,1,2	0/0:11,0:6:17.98:0,18,187	0/0:28,0:28:66.10:0,66,991	0/1:19,0:19:54.89:56,0,55	0/0:21,0:21:4.23:0,4,242	0/0:26,0:23:54.37:0,54,370	0/0:24,0:24:26.62:0,27,306	0/0:26,0:22:41.86:0,42,742	0/0:21,0:21:50.91:0,51,655	1/1:20,4:25:9.49:128,9,0	0/0:15,0:15:32.90:0,33,564	1/1:27,2:30:22.01:188,22,0	0/1:40,0:40:15.51:16,0,98	0/1:27,0:26:84.64:85,0,92	0/0:39,0:38:99:0,102,1401	0/0:21,0:21:50.22:0,50,691	0/0:27,0:27:52.32:0,52,406	0/1:26,0:25:5.50:5,0,185	0/1:24,0:20:5.59:6,0,54	0/1:20,2:22:2.82:35,0,3	1/1:16,2:18:1.66:6,2,0	0/1:28,1:29:8.03:79,0,8	0/0:18,0:17:44.99:0,45,627	0/1:14,0:14:54.37:54,0,151	0/1:21,0:21:32.34:32,0,251	0/0:6,0:6:8.89:0,9,63
chr10	100726875	.	AT	A	9292	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=11.483;DP=655;FS=0.316;HRun=9;HaplotypeScore=67.6048;InbreedingCoeff=0.9994;MQ=79.21;MQ0=0;MQRankSum=-3.136;QD=21.86;ReadPosRankSum=2.096;VQSLOD=5.6887;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:22:48.02:439,48,0	1/1:3,11:14:30.02:275,30,0	0/0:22,0:22:52.68:0,53,539	0/0:15,0:14:29.82:0,30,318	0/0:32,0:32:87.26:0,87,999	1/1:8,20:28:24.04:461,24,0	1/1:1,16:17:48.03:439,48,0	1/1:9,29:38:89.73:788,90,0	0/0:11,0:11:30.08:0,30,338	0/0:24,0:24:66.20:0,66,762	0/0:29,0:29:84.25:0,84,970	1/1:3,17:20:42.01:384,42,0	0/0:23,0:23:30.16:0,30,586	1/1:3,19:22:60.03:549,60,0	1/1:2,20:22:51.03:467,51,0	1/1:5,24:30:65.07:583,65,0	0/0:28,0:28:78.17:0,78,872	0/0:21,0:21:60.16:0,60,681	1/1:5,15:21:47.03:414,47,0	1/1:1,28:29:84.05:767,84,0	1/1:1,19:20:45.02:412,45,0	1/1:2,19:21:48.02:439,48,0	1/1:3,19:22:54.03:494,54,0	1/1:0,15:15:42.02:384,42,0	0/0:24,0:24:66.19:0,66,753	1/1:5,32:37:64.33:843,64,0	1/1:2,28:30:80.93:741,81,0	1/1:1,16:17:45.02:412,45,0
chr10	100728747	.	GGTGTGTGT	G	2067.86	PASS	AB=0.859;AC=20;AF=0.370;AN=54;BaseQRankSum=7.613;DP=501;FS=51.037;HRun=0;HaplotypeScore=146.5614;InbreedingCoeff=0.5846;MQ=61.75;MQ0=18;MQRankSum=-7.854;QD=10.09;ReadPosRankSum=-2.068;VQSLOD=0.8708;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:33.08:0,33,871	1/1:4,2:6:3.01:75,3,0	0/0:20,0:11:0:0,0,0	./.	0/0:17,0:16:27.04:0,27,580	1/1:11,6:17:9.50:225,10,0	1/1:8,3:10:6.02:149,6,0	0/1:24,0:24:14.93:15,0,35	0/0:11,0:11:11.97:0,12,339	0/0:19,0:19:36.11:0,36,969	0/0:12,0:11:15.04:0,15,454	0/0:21,0:23:24.05:0,24,880	0/0:12,0:12:9.02:0,9,115	0/0:7,0:8:9.03:0,9,334	1/1:14,1:21:20.43:170,20,0	0/1:5,6:11:3.78:212,0,4	0/0:23,0:26:23.90:0,24,719	0/0:19,0:24:22.21:0,22,475	1/1:12,1:13:3.01:75,3,0	1/1:12,7:18:17.91:335,18,0	0/1:24,3:24:7.70:68,0,8	0/0:7,0:7:12.04:0,12,369	0/0:11,0:10:18.06:0,18,671	0/0:31,0:30:51.14:0,51,1583	0/0:19,0:19:21.05:0,21,563	1/1:14,7:23:14.87:493,15,0	1/1:8,7:15:17.55:370,18,0	0/1:14,2:16:20.92:66,0,21
chr10	100729050	.	CTACCAA	C	2717.46	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.960;DP=739;FS=7.459;HRun=0;HaplotypeScore=164.8188;InbreedingCoeff=0.9988;MQ=88.06;MQ0=0;MQRankSum=-10.173;QD=64.70;ReadPosRankSum=2.047;VQSLOD=3.4937;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,4065	1/1:0,11:11:24.08:614,24,0	0/0:34,0:34:99:0,99,3563	0/0:23,0:23:69.23:0,69,2293	0/0:22,0:22:66.23:0,66,2380	0/0:26,0:26:78.27:0,78,2881	0/0:25,0:25:75.24:0,75,2488	0/0:34,0:34:99:0,99,3309	0/0:30,0:30:90.31:0,90,3318	0/0:28,0:28:84.29:0,84,3127	0/0:11,0:11:33.10:0,33,1154	0/0:31,0:31:93.32:0,93,3396	0/0:43,0:43:99:0,129,4766	0/0:33,0:33:99:0,99,3543	1/1:0,31:31:87.30:2225,87,0	0/0:28,0:28:84.29:0,84,3125	0/0:32,0:32:96.33:0,96,3525	0/0:26,0:26:78.27:0,78,2890	0/0:22,0:22:66.21:0,66,2241	0/0:25,0:25:72.25:0,72,2611	0/0:36,0:36:99:0,108,4047	0/0:18,0:18:54.19:0,54,2012	0/0:15,0:15:45.15:0,45,1649	0/0:27,0:27:81.23:0,81,2956	0/0:21,0:21:60.15:0,60,2007	0/0:22,0:22:66.22:0,66,2399	0/0:29,0:29:87.30:0,87,3271	0/0:19,0:19:54.19:0,54,1806
chr10	100729295	.	CTGCT	C	14781.98	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=20.074;DP=768;FS=20.201;HRun=0;HaplotypeScore=156.2937;InbreedingCoeff=0.9939;MQ=79.66;MQ0=1;MQRankSum=-11.379;QD=47.38;ReadPosRankSum=0.530;VQSLOD=4.1894;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,148,3909	1/1:2,12:14:36.12:683,36,0	0/0:19,0:19:10.47:0,10,1110	0/0:24,0:24:66.19:0,66,1587	0/0:24,0:24:66.23:0,66,1735	1/1:2,32:34:87.30:1651,87,0	1/1:5,28:33:78.27:1442,78,0	1/1:2,21:23:60.21:1122,60,0	0/0:37,0:37:99:0,111,2904	0/0:35,0:35:99:0,102,2737	0/0:18,0:18:54.19:0,54,1457	0/0:28,0:28:81.28:0,81,2179	0/0:30,0:30:87.30:0,87,2314	0/0:27,0:27:81.28:0,81,2163	1/1:1,26:26:66.23:1253,66,0	1/1:0,31:31:90.31:1653,90,0	0/0:19,0:19:51.18:0,51,1337	0/0:20,0:20:60.21:0,60,1620	1/1:3,19:22:51.17:968,51,0	1/1:1,28:29:81.23:1476,81,0	1/1:7,25:32:66.22:1208,66,0	0/0:26,0:26:75.26:0,75,2010	0/0:21,0:21:63.22:0,63,1673	0/0:39,0:38:99:0,111,2945	0/0:39,0:39:99:0,111,2797	1/1:1,23:23:69.20:1244,69,0	1/1:2,30:32:81.28:1532,81,0	1/1:0,11:11:30.10:550,30,0
chr10	100729878	.	CAG	C	9511.13	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=16.580;DP=728;FS=0.937;HRun=0;HaplotypeScore=95.2146;InbreedingCoeff=0.9999;MQ=85.96;MQ0=0;MQRankSum=-0.084;QD=36.16;ReadPosRankSum=1.275;VQSLOD=7.0475;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.22:0,63,1132	0/0:13,0:13:39.13:0,39,702	0/0:26,0:27:63.15:0,63,1082	0/0:19,0:19:45.11:0,45,758	0/0:41,0:41:99:0,117,2090	1/1:0,28:28:72.24:1009,72,0	1/1:0,13:13:39.13:546,39,0	1/1:7,35:42:99:1412,102,0	0/0:20,0:20:57.19:0,57,984	0/0:39,0:39:99:0,114,2028	0/0:23,0:23:69.24:0,69,1242	0/0:29,0:29:75.26:0,75,1349	0/0:22,0:22:63.22:0,63,1122	0/0:35,0:35:99:0,102,1830	0/0:26,0:26:72.25:0,72,1297	1/1:3,17:20:51.17:713,51,0	0/0:37,0:37:99:0,105,1882	0/0:12,0:12:33.11:0,33,591	1/1:1,17:18:51.17:712,51,0	1/1:1,31:32:87.29:1213,87,0	1/1:2,30:32:84.28:1177,84,0	0/0:27,0:27:75.24:0,75,1317	0/0:25,0:25:72.23:0,72,1255	0/0:26,0:26:75.26:0,75,1339	0/0:22,0:22:66.23:0,66,1189	1/1:3,20:23:60.20:839,60,0	1/1:3,34:37:90.30:1260,90,0	1/1:0,18:18:45.15:630,45,0
chr10	100730274	.	AAAGGAAGGAAGGAAGG	A	7925.16	PASS	AB=0.608;AC=23;AF=0.442;AN=52;BaseQRankSum=5.520;DP=597;FS=15.410;HRun=0;HaplotypeScore=259.3733;InbreedingCoeff=0.8277;MQ=66.06;MQ0=4;MQRankSum=-7.551;QD=31.45;ReadPosRankSum=1.858;VQSLOD=2.5195;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:30:51.13:0,51,2380	1/1:5,0:13:12.03:126,12,0	./.	./.	0/0:32,0:32:60.21:0,60,4070	1/1:14,20:33:39.13:1681,39,0	1/1:11,9:20:9.03:390,9,0	1/1:17,0:16:6.01:106,6,0	0/0:19,0:19:42.14:0,42,2842	0/0:14,0:32:78.26:0,78,4325	0/0:12,0:23:45.15:0,45,2435	0/0:10,0:20:30.09:0,30,1418	0/0:27,0:27:42.14:0,42,2757	0/0:12,0:19:21.07:0,21,1135	0/1:11,0:31:62.48:297,0,62	1/1:3,9:12:9.03:395,9,0	0/0:18,0:18:33.11:0,33,1960	0/0:15,0:14:27.96:0,28,1245	1/1:10,6:16:17.99:204,18,0	1/1:9,25:34:48.03:1520,48,0	1/1:13,0:13:3:25,3,0	0/0:16,0:26:54.13:0,54,2501	0/0:10,0:29:45.25:0,45,2634	0/0:3,0:12:20.99:0,21,1121	0/0:16,0:16:39.13:0,39,2694	1/1:14,15:29:38.66:1209,39,0	1/1:8,22:30:42.14:1842,42,0	1/1:1,2:3:3.01:132,3,0
chr10	100730389	.	CA	C	430.86	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.537;DP=696;FS=2.406;HRun=9;HaplotypeScore=72.3049;InbreedingCoeff=0.9425;MQ=68.63;MQ0=4;MQRankSum=0.063;QD=16.57;ReadPosRankSum=1.344;VQSLOD=3.9785;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:84.21:0,84,946	1/1:3,5:8:15:137,15,0	0/0:29,0:20:6.47:0,6,245	0/0:40,0:20:32.70:0,33,391	0/0:26,0:26:66.16:0,66,727	0/0:23,0:23:66.13:0,66,726	0/0:20,0:20:48.03:0,48,513	0/0:28,1:29:47.75:0,48,793	0/0:19,0:19:54.14:0,54,603	0/0:29,0:29:69.20:0,69,790	0/0:23,0:23:60.16:0,60,676	0/0:21,1:22:32.69:0,33,612	0/0:23,0:23:63.18:0,63,717	0/0:23,1:24:37.52:0,38,689	1/1:1,17:18:45.02:412,45,0	0/0:22,0:22:57.12:0,57,627	0/0:33,0:33:93.24:0,93,1051	0/0:21,0:21:51.10:0,51,556	0/0:20,0:20:48.06:0,48,537	0/0:39,0:39:99:0,100,1117	0/0:12,0:12:33.09:0,33,371	0/0:25,0:25:66.17:0,66,735	0/0:29,0:29:78.21:0,78,881	0/0:20,1:21:22.76:0,23,511	0/0:39,0:40:96.06:0,96,1047	0/0:22,0:22:60.18:0,60,692	0/0:31,0:31:81.22:0,81,922	0/0:16,0:16:42.09:0,42,471
chr10	100730805	.	CCT	C	7492.59	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=13.297;DP=604;FS=48.528;HRun=0;HaplotypeScore=82.0352;InbreedingCoeff=0.9937;MQ=62.74;MQ0=13;MQRankSum=-0.954;QD=32.30;ReadPosRankSum=1.609;VQSLOD=3.3835;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:83.95:0,84,1466	1/1:0,4:4:12.04:172,12,0	0/0:37,0:24:54.57:0,55,859	0/0:47,0:18:18.20:0,18,514	0/0:30,0:30:84.29:0,84,1511	1/1:2,17:19:42.14:602,42,0	1/1:3,7:10:24.22:306,24,0	1/1:4,22:25:63.15:844,63,0	0/0:18,0:18:45.15:0,45,797	0/0:26,0:25:72.24:0,72,1258	0/0:17,0:17:51.17:0,51,894	0/0:17,0:17:48.16:0,48,869	0/0:27,0:27:75.26:0,75,1351	0/0:19,0:19:57.18:0,57,996	1/1:0,24:24:54.18:774,54,0	1/1:1,20:21:42.14:602,42,0	0/0:24,0:24:69.24:0,69,1245	0/0:12,0:11:33.11:0,33,598	1/1:1,17:17:48.04:640,48,0	1/1:3,21:24:57:743,57,0	1/1:3,22:24:40.44:599,40,0	0/0:17,0:17:48.14:0,48,814	0/0:15,0:15:45.15:0,45,820	0/0:19,0:19:51.17:0,51,924	0/0:15,0:15:42.12:0,42,702	1/1:0,19:19:54.09:708,54,0	1/1:0,29:29:84.28:1203,84,0	1/1:4,9:13:21.07:301,21,0
chr10	100733468	.	AT	A	4822.66	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.534;DP=704;FS=0.348;HRun=4;HaplotypeScore=66.4767;InbreedingCoeff=0.9935;MQ=67.07;MQ0=3;MQRankSum=-0.123;QD=31.11;ReadPosRankSum=3.662;VQSLOD=5.2251;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:22:54.17:647,54,0	0/0:12,0:12:36.12:0,36,503	0/0:25,0:22:49.68:0,50,620	0/0:8,0:6:12:0,12,146	0/0:31,0:31:87.28:0,87,1196	0/0:42,0:42:99:0,123,1721	0/0:19,0:19:54.17:0,54,739	0/0:36,0:36:99:0,102,1412	0/0:20,0:20:60.19:0,60,823	0/0:39,0:39:99:0,108,1513	0/0:28,0:28:84.26:0,84,1143	1/1:0,31:31:81.25:972,81,0	0/0:31,0:31:90.30:0,90,1260	1/1:0,25:25:69.21:828,69,0	0/0:26,0:26:75.22:0,75,1016	0/0:26,0:26:78.26:0,78,1092	0/0:15,0:15:45.15:0,45,629	0/0:11,0:11:30.10:0,30,420	0/0:20,0:19:57.18:0,57,781	0/0:33,0:33:96.31:0,96,1324	0/0:17,0:17:51.10:0,51,690	1/1:2,31:33:87.27:1044,87,0	1/1:0,21:21:57.17:684,57,0	1/1:2,20:22:54.16:648,54,0	0/0:26,0:26:75.24:0,75,1020	0/0:33,0:33:96.31:0,96,1318	0/0:40,0:40:99:0,117,1636	0/0:11,0:11:33.11:0,33,462
chr10	100734589	.	C	CTT	11402.52	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=18.872;DP=665;FS=4.038;HRun=1;HaplotypeScore=125.7776;InbreedingCoeff=0.9900;MQ=83.60;MQ0=0;MQRankSum=-19.152;QD=51.83;ReadPosRankSum=0.484;VQSLOD=4.7160;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.28:0,87,1306	0/0:14,0:14:42.14:0,42,640	0/0:26,0:26:72.19:0,72,1039	0/0:20,0:20:57.12:0,57,780	0/0:34,0:34:99:0,102,1469	1/1:3,30:34:87.30:1637,87,0	1/1:3,12:15:45.15:816,45,0	1/1:15,20:35:87.28:1656,87,0	0/0:23,0:23:66.22:0,66,1010	0/0:34,0:34:96.33:0,96,1466	0/0:28,0:28:75.24:0,75,1127	0/0:25,0:25:72.24:0,72,1100	0/0:24,0:24:72.24:0,72,1102	0/0:19,0:19:57.18:0,57,849	0/0:40,0:40:99:0,114,1699	1/1:3,24:27:81.28:1516,81,0	0/0:25,0:25:75.23:0,75,1119	0/0:14,0:14:39.11:0,39,597	1/1:2,16:18:54.19:1021,54,0	1/1:8,23:31:87.29:1611,87,0	1/1:2,3:5:8.83:169,9,0	0/0:30,0:30:87.30:0,87,1327	0/0:25,0:25:72.24:0,72,1091	0/0:15,0:15:45.15:0,45,687	0/0:19,0:19:51.16:0,51,758	1/1:5,18:23:23.29:1192,23,0	1/1:6,19:25:75.24:1387,75,0	1/1:0,7:7:21.07:397,21,0
chr10	100734593	.	T	TTCAA	17668.10	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=18.666;DP=679;FS=7.863;HRun=0;HaplotypeScore=139.5110;InbreedingCoeff=0.9976;MQ=81.49;MQ0=0;MQRankSum=-19.324;QD=73.62;ReadPosRankSum=-0.546;VQSLOD=5.8981;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.29:0,87,1703	0/0:14,0:14:42.14:0,42,797	0/0:24,0:24:69.23:0,69,1297	0/0:20,0:20:57.18:0,57,1055	0/0:35,0:35:99:0,102,1950	1/1:11,25:36:96.27:2501,96,0	1/1:2,12:14:42.14:1141,42,0	1/1:20,19:39:99:2916,114,0	0/0:23,0:23:69.23:0,69,1335	0/0:35,0:35:99:0,105,2035	0/0:28,0:28:84.29:0,84,1665	0/0:24,0:24:69.24:0,69,1378	0/0:24,0:24:72.25:0,72,1438	0/0:19,0:19:57.20:0,57,1118	0/0:37,0:37:99:0,111,2097	1/1:6,25:31:87.30:2354,87,0	0/0:23,0:23:69.20:0,69,1305	0/0:15,0:15:42.11:0,42,799	1/1:7,14:21:63.17:1608,63,0	1/1:8,23:31:90.20:2246,90,0	1/1:3,3:6:18.02:390,18,0	0/0:29,0:29:84.26:0,84,1607	0/0:28,0:28:78.22:0,78,1433	0/0:15,0:15:42.14:0,42,839	0/0:17,0:17:51.17:0,51,986	1/1:10,17:28:21.33:1923,21,0	1/1:6,20:26:75.24:2010,75,0	1/1:1,7:8:21.07:579,21,0
chr10	100735004	.	G	GA	13896.02	PASS	AB=0.529;AC=35;AF=0.625;AN=56;BaseQRankSum=-2.785;DP=546;FS=1.484;HRun=2;HaplotypeScore=59.4201;InbreedingCoeff=0.9512;MQ=81.87;MQ0=0;MQRankSum=-2.410;QD=39.14;ReadPosRankSum=0.682;VQSLOD=5.3471;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:66.22:950,66,0	1/1:0,10:10:30.10:432,30,0	0/0:20,0:20:40.01:0,40,613	0/0:12,0:12:20.45:0,20,270	0/0:19,0:19:57.18:0,57,706	1/1:2,21:23:63.21:907,63,0	1/1:0,15:15:42.14:605,42,0	1/1:3,27:31:84.27:1187,84,0	0/0:23,0:23:69.20:0,69,841	0/0:27,0:27:78.24:0,78,958	0/0:21,0:21:60.19:0,60,742	1/1:2,10:12:30.10:432,30,0	0/0:10,0:10:27.08:0,27,335	1/1:0,12:12:36.12:518,36,0	1/1:0,17:17:48.16:691,48,0	1/1:0,14:14:42.14:605,42,0	0/0:22,0:22:60.17:0,60,729	0/0:21,0:21:63.18:0,63,766	1/1:1,19:20:60.18:838,60,0	1/1:1,34:35:90.26:1273,90,0	1/1:2,16:18:42.14:605,42,0	1/1:1,16:17:48.16:691,48,0	1/1:1,17:18:51.17:734,51,0	1/1:1,13:14:39.13:562,39,0	0/0:16,0:16:45.14:0,45,558	0/1:3,24:27:2.13:879,0,2	1/1:0,37:37:99:1598,111,0	1/1:3,9:12:27.09:389,27,0
chr10	100735523	.	T	TGG	5631.92	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=1.828;DP=361;FS=0.000;HRun=7;HaplotypeScore=57.3014;InbreedingCoeff=0.9374;MQ=78.01;MQ0=0;MQRankSum=-2.241;QD=25.03;ReadPosRankSum=-1.201;VQSLOD=3.3765;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,20:28:53.67:846,54,0	1/1:1,0:4:6.01:63,6,0	0/0:10,0:10:21.04:0,21,231	0/0:10,0:10:7.39:0,7,70	0/0:12,0:12:30.08:0,30,350	1/1:4,0:16:42.04:435,42,0	1/1:3,0:8:12.02:116,12,0	1/1:8,4:27:48.02:533,48,0	0/0:13,0:13:33.08:0,33,374	0/0:12,0:12:36.11:0,36,419	0/0:19,0:19:51.14:0,51,594	1/1:2,5:7:12.04:197,12,0	0/0:6,0:6:18.05:0,18,209	1/1:0,7:7:18.06:295,18,0	1/1:4,1:10:21.04:216,21,0	1/1:0,1:8:20.95:223,21,0	0/0:20,0:20:48.13:0,48,559	0/0:10,0:10:24.05:0,24,267	1/1:7,2:15:30.05:316,30,0	1/1:8,0:15:18.04:189,18,0	1/1:3,1:9:6.01:58,6,0	1/1:2,5:7:15.05:246,15,0	1/1:1,10:11:30.10:491,30,0	1/1:1,11:12:30.10:492,30,0	0/0:24,0:24:63.16:0,63,721	1/1:3,0:15:36.07:373,36,0	1/1:4,0:19:39.06:378,39,0	1/1:2,1:7:15.03:165,15,0
chr10	100736891	.	T	TCTCTCTCA	3601.11	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=-2.623;DP=629;FS=1.305;HRun=0;HaplotypeScore=174.0801;InbreedingCoeff=0.3756;MQ=57.85;MQ0=23;MQRankSum=0.583;QD=9.63;ReadPosRankSum=3.170;VQSLOD=2.6775;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:40:6.01:333,0,6	0/0:9,0:9:11.95:0,12,129	0/0:25,0:17:36.05:0,36,368	0/0:38,0:11:23.98:0,24,239	0/0:27,0:26:33.94:0,34,355	1/1:25,0:24:11.84:115,12,0	1/1:22,0:22:8.97:223,9,0	0/1:49,0:44:12.91:515,0,13	0/0:13,0:12:23.64:0,24,217	0/0:31,0:30:63.01:0,63,541	0/0:15,0:15:35.93:0,36,294	1/1:9,8:16:6.49:175,6,0	0/0:26,0:26:57.74:0,58,573	1/1:18,0:16:21.82:285,22,0	0/0:17,0:17:35.83:0,36,284	1/1:17,0:15:5.86:229,6,0	0/0:19,0:15:23.97:0,24,200	0/0:11,0:8:18.79:0,19,139	0/1:23,0:23:89.19:300,0,89	0/1:26,0:25:42.64:360,0,43	0/1:21,0:21:79.21:202,0,79	1/1:24,0:23:30.33:239,30,0	1/1:25,0:25:0.26:0,0,0	0/1:5,0:4:2.04:19,0,2	0/0:24,0:24:38.99:0,39,335	0/1:24,0:24:35.64:262,0,36	1/1:17,0:17:8.67:232,9,0	0/1:19,0:16:55.57:113,0,56
chr10	100736897	.	T	TCA	3185.04	PASS	AB=0.990;AC=18;AF=0.321;AN=56;BaseQRankSum=-1.667;DP=609;FS=6.041;HRun=0;HaplotypeScore=104.1763;InbreedingCoeff=0.1107;MQ=53.22;MQ0=26;MQRankSum=1.503;QD=9.51;ReadPosRankSum=2.865;VQSLOD=3.1493;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:39:0.04:326,0,0	0/0:7,0:7:14.91:0,15,114	0/0:21,0:13:36.05:0,36,368	0/0:36,0:9:23.98:0,24,239	0/0:26,0:25:36.93:0,37,379	0/1:23,0:22:2.74:125,0,3	1/1:17,0:17:23.90:238,24,0	0/1:43,0:38:53.78:514,0,54	0/0:15,0:14:26.77:0,27,235	0/0:28,0:27:77.49:0,77,647	0/0:17,0:16:35.93:0,36,295	1/1:18,0:16:6.02:80,6,0	0/0:25,0:24:62.72:0,63,495	0/1:20,0:18:55.07:202,0,55	0/0:21,0:21:46.53:0,47,368	0/1:18,0:16:31.98:191,0,32	0/0:18,0:14:29.96:0,30,248	0/0:12,0:9:25.38:0,25,180	0/1:20,0:20:99:169,0,149	0/1:26,0:25:9.43:322,0,9	0/1:19,1:20:28.94:280,0,29	1/1:24,1:23:12.84:219,13,0	0/0:8,18:26:2.95:0,3,24	0/1:5,0:4:2.04:19,0,2	0/0:22,0:21:41.98:0,42,360	0/1:22,2:24:60.05:418,0,60	0/1:16,0:16:26.53:145,0,27	0/1:21,0:18:80.16:108,0,80
chr10	100736987	.	CTG	C	1072.08	PASS	AB=0.927;AC=15;AF=0.268;AN=56;BaseQRankSum=6.627;DP=572;FS=0.639;HRun=0;HaplotypeScore=122.6191;InbreedingCoeff=0.5367;MQ=50.54;MQ0=15;MQRankSum=-1.637;QD=5.67;ReadPosRankSum=-3.378;VQSLOD=2.5518;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,9:17:18.04:248,18,0	0/0:8,0:8:9.89:0,10,118	0/0:46,0:10:22.60:0,23,314	0/0:58,0:25:45.41:0,45,689	0/0:24,0:24:47.99:0,48,830	0/1:30,0:29:39.90:40,0,133	0/1:15,0:13:15.41:15,0,53	0/1:47,0:43:64.01:64,0,621	0/0:23,0:23:69.24:0,69,1297	0/0:24,0:24:72.24:0,72,1316	0/0:14,0:14:30.02:0,30,469	1/1:5,7:12:13.33:157,13,0	0/0:16,0:16:45.13:0,45,770	1/1:1,14:15:24.08:360,24,0	0/0:16,0:15:8.94:0,9,74	0/0:21,0:16:13.06:0,13,184	0/0:34,0:32:75.16:0,75,1374	0/0:11,0:11:27.09:0,27,493	0/0:13,0:11:0.92:0,1,89	0/0:21,0:21:11.57:0,12,50	0/0:11,0:10:14.71:0,15,104	1/1:12,15:27:12.50:265,13,0	1/1:7,5:12:6.02:92,6,0	0/1:3,4:6:0:0,0,0	0/0:14,0:14:35.99:0,36,639	0/0:11,0:11:23.16:0,23,320	0/0:16,0:14:6.49:0,6,171	0/1:5,0:5:0.04:0,0,41
chr10	100736989	.	G	GTCTC	985.86	PASS	AB=1.000;AC=23;AF=0.426;AN=54;BaseQRankSum=7.249;DP=588;FS=17.000;HRun=0;HaplotypeScore=146.6090;InbreedingCoeff=0.7192;MQ=49.99;MQ0=19;MQRankSum=-5.044;QD=4.23;ReadPosRankSum=-4.299;VQSLOD=0.2003;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:12.62:0,13,72	1/1:9,0:9:10.80:79,11,0	0/0:47,0:10:15.32:0,15,142	0/0:60,0:23:30.03:0,30,294	0/0:23,0:23:42.10:0,42,698	1/1:29,0:28:10.41:79,10,0	1/1:15,0:13:4.86:27,5,0	1/1:46,0:42:58.64:406,59,0	0/0:25,0:25:68.96:0,69,1023	0/0:23,0:23:69.16:0,69,1101	0/0:14,0:14:29.99:0,30,431	0/1:13,0:13:2.67:3,0,91	0/0:17,0:17:42.08:0,42,622	0/0:15,0:15:11.29:0,11,77	1/1:11,7:17:3.39:28,3,0	1/1:21,0:16:7.60:88,8,0	0/0:34,0:32:74.83:0,75,1199	0/0:11,0:11:26.63:0,27,367	1/1:13,0:11:14.90:127,15,0	0/1:22,0:22:0.14:0,0,0	0/1:10,0:9:5.01:63,0,5	0/0:29,0:29:16.01:0,16,107	0/0:13,0:13:5.70:0,6,44	./.	0/0:16,0:15:35.54:0,36,585	1/1:15,0:15:2.98:149,3,0	1/1:17,0:15:11.47:88,11,0	1/1:5,0:5:5.88:38,6,0
chr10	100736993	.	GTC	G	175.27	PASS	AB=0.728;AC=6;AF=0.107;AN=56;BaseQRankSum=4.691;DP=612;FS=6.624;HRun=0;HaplotypeScore=132.7075;InbreedingCoeff=0.3505;MQ=48.56;MQ0=26;MQRankSum=-4.321;QD=2.22;ReadPosRankSum=-0.732;VQSLOD=1.9100;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,3:16:6.01:62,6,0	0/0:9,0:9:6.98:0,7,99	0/0:47,0:8:12.02:0,12,126	0/0:59,0:17:17.94:0,18,191	0/0:25,1:26:37.48:0,37,534	0/0:29,0:28:11.62:0,12,108	0/0:15,0:12:2.97:0,3,10	0/0:43,0:40:5.73:0,6,587	0/0:26,0:26:45.15:0,45,713	0/0:29,0:28:59.21:0,59,780	0/0:14,1:14:24.08:0,24,372	0/1:7,6:13:33.07:98,0,33	0/0:19,0:19:39.13:0,39,598	1/1:4,9:14:11.93:112,12,0	0/0:18,0:17:2.96:0,3,27	0/0:22,0:17:3.17:0,3,69	0/0:37,1:36:75.10:0,75,1128	0/0:11,0:11:17.89:0,18,251	0/0:14,0:11:9.37:0,9,132	0/0:24,0:24:10.16:0,10,39	0/0:9,0:8:3.01:0,3,33	0/1:24,10:33:14.37:24,0,14	0/0:12,4:16:2.58:0,3,10	0/0:7,1:7:0:0,0,0	0/0:18,0:17:27.06:0,27,377	0/0:16,0:16:40.64:0,41,340	0/0:17,0:15:14.83:0,15,89	0/0:5,0:5:5.20:0,5,28
chr10	100737012	.	G	GGTGT	570.59	PASS	AB=0.806;AC=22;AF=0.440;AN=50;BaseQRankSum=1.727;DP=544;FS=0.000;HRun=0;HaplotypeScore=128.1028;InbreedingCoeff=0.2774;MQ=47.78;MQ0=27;MQRankSum=-3.205;QD=2.32;ReadPosRankSum=-3.082;VQSLOD=1.4973;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,1:21:2.88:49,3,0	0/0:7,0:10:8.92:0,9,86	./.	./.	0/0:30,0:33:23.04:0,23,414	1/1:17,0:16:2.88:71,3,0	1/1:13,0:11:0.94:1,1,0	1/1:20,0:15:4.79:26,5,0	0/0:18,0:18:12.04:0,12,186	0/0:27,0:25:24.07:0,24,310	0/0:18,0:17:12.04:0,12,181	0/0:15,0:15:1.29:0,1,17	0/0:17,0:17:21.07:0,21,325	0/1:18,0:16:30.52:49,0,31	0/0:13,0:17:2.82:0,3,22	1/1:12,5:13:3.01:67,3,0	0/0:36,0:37:30.09:0,30,440	0/0:11,0:10:9.02:0,9,108	1/1:15,0:12:6.02:100,6,0	0/1:8,3:25:57.43:92,0,57	1/1:9,0:9:3.46:25,3,0	0/1:25,9:38:12.69:61,0,13	1/1:10,8:19:3.73:24,4,0	0/1:3,3:5:0:0,0,0	0/0:16,0:15:12.02:0,12,163	0/1:13,0:14:47.67:91,0,48	0/1:7,1:6:8.48:64,0,8	./.
chr10	100737758	.	T	TTCCAGA	26039.67	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-0.791;DP=583;FS=4.627;HRun=0;HaplotypeScore=132.1399;InbreedingCoeff=0.9537;MQ=75.22;MQ0=0;MQRankSum=-17.222;QD=72.94;ReadPosRankSum=-2.226;VQSLOD=4.7142;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,10:17:33.07:1024,33,0	1/1:1,8:11:24.08:862,24,0	0/0:18,0:18:50.51:0,51,1010	0/0:19,0:19:27.48:0,27,924	0/0:28,0:28:81.24:0,81,1767	1/1:4,10:14:30.10:1062,30,0	1/1:4,8:12:24.08:815,24,0	1/1:16,14:32:81.24:2575,81,0	0/0:16,0:16:45.15:0,45,1082	0/0:23,0:23:66.23:0,66,1554	0/0:26,0:26:63.20:0,63,1401	1/1:3,13:19:42.14:1409,42,0	0/0:19,0:19:54.17:0,54,1250	1/1:3,21:26:66.23:2343,66,0	1/1:4,17:22:57.20:1928,57,0	1/1:1,20:22:60.21:2072,60,0	0/0:22,0:22:66.23:0,66,1587	0/0:18,0:18:54.14:0,54,1246	1/1:4,12:16:45.15:1486,45,0	1/1:7,29:37:42.10:1364,42,0	1/1:1,5:6:5.98:206,6,0	1/1:3,18:22:45.11:1478,45,0	1/1:3,21:25:45.15:1577,45,0	1/1:1,7:9:15.05:529,15,0	0/0:37,0:37:99:0,105,2389	1/1:8,19:28:3.08:2330,3,0	1/1:3,25:32:69.24:2439,69,0	1/1:0,6:6:15.05:539,15,0
chr10	100737850	.	CTGTG	C	8848.05	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=15.533;DP=569;FS=9.227;HRun=0;HaplotypeScore=143.7111;InbreedingCoeff=0.9632;MQ=65.98;MQ0=0;MQRankSum=-14.215;QD=27.31;ReadPosRankSum=1.467;VQSLOD=4.4234;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,11:31:33.28:520,33,0	1/1:0,5:5:12.04:207,12,0	0/0:32,0:31:39.04:0,39,1771	0/0:33,0:30:67.10:0,67,1501	0/0:27,0:28:56.98:0,57,1372	1/1:6,11:17:36.11:577,36,0	1/1:8,10:18:18.06:311,18,0	1/1:15,12:27:24.08:413,24,0	0/0:18,0:18:51.18:0,51,1287	0/0:21,0:21:45.15:0,45,1136	0/0:19,0:19:39.13:0,39,945	1/1:12,8:20:24.08:396,24,0	0/0:22,0:22:60.21:0,60,1494	1/1:4,6:10:18.02:279,18,0	1/1:7,13:20:42.10:690,42,0	1/1:7,12:19:42.04:628,42,0	0/0:34,0:34:93.31:0,93,2301	0/0:12,0:13:35.91:0,36,834	1/1:9,8:17:24.07:387,24,0	1/1:2,16:18:39.10:627,39,0	1/1:6,3:9:3.01:52,3,0	1/1:3,23:26:57.19:970,57,0	1/1:7,12:19:24.08:411,24,0	1/1:5,6:11:15.05:259,15,0	0/0:24,0:24:54.19:0,54,1325	1/1:10,17:27:54.18:929,54,0	1/1:5,17:22:48.16:828,48,0	1/1:0,8:8:21.07:362,21,0
chr10	100737998	.	AG	A	1219.63	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.129;DP=620;FS=4.034;HRun=1;HaplotypeScore=143.4691;InbreedingCoeff=0.9987;MQ=82.67;MQ0=0;MQRankSum=-2.619;QD=36.96;ReadPosRankSum=0.190;VQSLOD=3.1434;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:67.50:0,68,632	1/1:0,11:11:33.11:461,33,0	0/0:31,0:31:90.30:0,90,1420	0/0:20,0:20:60.20:0,60,941	0/0:29,0:29:87.30:0,87,1384	0/0:16,0:16:43.29:0,43,314	0/0:23,0:23:62.82:0,63,420	0/0:29,0:29:43.26:0,43,384	0/0:25,0:25:75.26:0,75,1199	0/0:27,0:27:81.28:0,81,1293	0/0:26,0:26:78.27:0,78,1247	0/0:22,0:22:61.86:0,62,423	0/0:20,0:20:60.20:0,60,956	0/0:15,0:15:44.50:0,45,337	1/1:0,22:22:63.21:880,63,0	0/0:26,0:26:44.72:0,45,477	0/0:21,0:21:63.21:0,63,1001	0/0:18,0:18:51.17:0,51,815	0/0:19,0:19:52.84:0,53,347	0/0:24,0:24:70.81:0,71,472	0/0:19,0:19:30.16:0,30,293	0/0:28,0:28:78.79:0,79,578	0/0:27,0:27:70.95:0,71,497	0/0:10,0:10:26.67:0,27,188	0/0:26,0:26:78.27:0,78,1244	0/0:17,0:17:47.52:0,48,303	0/0:22,0:22:62.27:0,62,456	0/0:10,0:10:29.65:0,30,209
chr10	100740102	.	TA	T	1511.80	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=8.106;DP=425;FS=0.506;HRun=9;HaplotypeScore=45.4528;InbreedingCoeff=0.9484;MQ=81.84;MQ0=3;MQRankSum=-0.302;QD=14.97;ReadPosRankSum=3.325;VQSLOD=3.3578;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,17:22:29.05:344,29,0	1/1:2,9:11:18.01:165,18,0	0/0:18,0:11:14.56:0,15,132	0/0:22,0:15:24.35:0,24,157	0/0:23,0:23:66.15:0,66,722	0/0:16,0:16:45.12:0,45,511	0/0:9,0:9:27.06:0,27,300	0/0:17,0:17:48.12:0,48,529	0/0:8,0:8:24.07:0,24,277	0/0:25,0:25:72.20:0,72,809	0/0:19,0:20:47.97:0,48,525	1/1:1,13:14:33.02:302,33,0	0/0:12,0:12:27.07:0,27,302	1/1:5,12:17:33:302,33,0	1/1:2,13:15:24.01:219,24,0	0/0:6,0:6:18.05:0,18,208	0/0:16,0:16:39.07:0,39,426	0/0:10,0:10:27.06:0,27,291	0/0:20,0:20:51.12:0,51,562	0/0:18,0:18:48.13:0,48,543	0/0:1,0:1:2.97:0,3,20	1/1:1,5:6:15.01:137,15,0	1/1:4,7:11:15:137,15,0	1/1:0,5:5:12.01:110,12,0	0/0:19,0:19:51.12:0,51,562	0/0:30,0:30:81.16:0,81,870	0/0:26,0:25:69.19:0,69,785	0/0:8,0:8:12.04:0,12,138
chr10	100740680	.	T	TTTATTATTATTATTATTATTA	1148.67	PASS	AB=1.000;AC=17;AF=0.315;AN=54;BaseQRankSum=3.705;DP=280;FS=0.000;HRun=0;HaplotypeScore=147.5122;InbreedingCoeff=0.6238;MQ=75.30;MQ0=0;MQRankSum=-3.432;QD=28.72;ReadPosRankSum=-2.918;VQSLOD=2.0121;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:3.01:115,3,0	1/1:2,0:2:3.01:38,3,0	./.	0/1:5,0:5:10.63:11,0,31	0/0:12,0:12:27.07:0,27,922	0/0:22,0:22:54.19:0,54,2699	0/0:4,0:4:3:0,3,25	0/0:38,0:38:60.08:0,60,1134	0/0:9,0:9:15.05:0,15,770	0/0:16,0:16:33.07:0,33,896	0/0:3,0:3:3.01:0,3,168	1/1:2,0:5:3.01:142,3,0	0/0:10,0:10:15.03:0,15,649	1/1:4,0:4:9.02:301,9,0	1/1:2,5:7:6.02:484,6,0	0/0:6,0:6:9.03:0,9,294	0/0:13,0:13:30.09:0,30,1291	0/0:14,0:14:22.83:0,23,909	0/0:14,0:14:12.03:0,12,405	0/0:10,0:10:21.04:0,21,760	0/0:8,0:8:21.07:0,21,729	1/1:8,0:8:3.01:95,3,0	1/1:2,0:2:3.01:73,3,0	1/1:1,0:1:3.01:51,3,0	0/0:12,0:12:33.04:0,33,854	0/0:25,0:25:48.15:0,48,1847	0/0:10,0:10:24.03:0,24,796	0/0:7,0:7:20.94:0,21,596
chr10	100741502	.	CT	C	2064.59	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-7.314;DP=317;FS=1.355;HRun=10;HaplotypeScore=52.9515;InbreedingCoeff=0.7760;MQ=75.09;MQ0=5;MQRankSum=1.956;QD=16.00;ReadPosRankSum=3.472;VQSLOD=3.9980;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:5.50:0,5,145	1/1:5,0:5:12.78:54,13,0	1/1:16,2:8:2.20:42,2,0	0/0:27,1:20:12.32:0,12,104	1/1:2,14:17:41.03:344,41,0	0/0:7,0:7:6.05:0,6,152	0/0:6,0:6:6.02:0,6,66	0/0:22,0:22:36.86:0,37,365	1/1:1,6:7:17.99:156,18,0	1/1:2,11:13:32.99:286,33,0	1/1:2,13:15:35.94:305,36,0	0/0:7,0:7:5.59:0,6,73	1/1:2,6:8:14.99:130,15,0	0/0:2,0:2:5.98:0,6,53	1/1:5,0:5:12.71:54,13,0	0/0:9,0:8:4.18:0,4,146	1/1:1,15:16:41.99:365,42,0	1/1:0,8:8:24:208,24,0	0/0:20,0:18:28.14:0,28,357	0/0:10,0:10:15.39:0,15,141	0/0:4,0:4:5.88:0,6,48	0/1:3,0:3:7.85:8,0,27	0/0:10,0:9:17.54:0,18,162	0/0:10,0:10:15.70:0,16,221	1/1:2,12:14:37.81:318,38,0	0/0:8,0:8:14.40:0,14,136	0/0:19,0:19:40.10:0,40,367	0/0:10,0:9:23.90:0,24,242
chr10	100742501	.	A	AT	395.98	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.738;DP=557;DS;FS=2.978;HRun=9;HaplotypeScore=81.3665;InbreedingCoeff=0.9434;MQ=65.05;MQ0=3;MQRankSum=-0.649;QD=17.22;ReadPosRankSum=0.371;VQSLOD=3.8209;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:62.69:0,63,634	1/1:4,1:5:12.03:131,12,0	0/0:29,0:19:8.02:0,8,186	0/0:18,0:15:25.05:0,25,184	0/0:22,0:22:41.98:0,42,364	0/0:21,0:20:29.75:0,30,418	0/0:14,0:14:32.99:0,33,286	0/0:22,0:19:41.97:0,42,362	0/0:11,0:11:23.88:0,24,200	0/0:23,0:23:56.95:0,57,492	0/0:24,0:24:34.66:0,35,421	0/0:18,0:17:29.96:0,30,260	0/0:17,0:16:47.96:0,48,409	0/0:19,0:18:41.93:0,42,365	1/1:11,7:18:36.05:381,36,0	0/0:24,0:24:62.97:0,63,546	0/0:27,0:27:68.98:0,69,598	0/0:16,0:15:41.99:0,42,364	0/0:9,0:9:23.99:0,24,208	0/0:25,0:25:47.98:0,48,415	0/0:17,0:17:44.97:0,45,386	0/0:17,0:17:32.98:0,33,285	0/0:18,0:17:41.98:0,42,364	0/0:10,0:10:23.99:0,24,208	0/0:26,0:26:59.98:0,60,520	0/0:28,0:28:62.95:0,63,543	0/0:32,0:31:58.68:0,59,674	0/0:13,0:13:32.98:0,33,286
chr10	100742513	.	GT	G	2266.55	PASS	AB=0.904;AC=19;AF=0.339;AN=56;BaseQRankSum=10.239;DP=544;DS;FS=1.309;HRun=10;HaplotypeScore=71.9377;InbreedingCoeff=0.7693;MQ=65.34;MQ0=0;MQRankSum=0.664;QD=13.03;ReadPosRankSum=2.478;VQSLOD=3.7660;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,26:34:65.95:573,66,0	1/1:4,1:5:14.98:125,15,0	0/0:26,0:19:24.06:0,24,253	0/0:18,0:14:18.56:0,19,207	0/0:20,0:21:38.92:0,39,397	0/0:19,0:19:44.91:0,45,465	0/1:13,1:14:10.92:11,0,300	0/0:18,0:18:45.12:0,45,498	0/0:10,0:10:27.01:0,27,269	0/0:24,1:25:40.12:0,40,664	0/0:27,1:28:31.02:0,31,536	1/1:3,12:15:23.96:208,24,0	0/0:17,1:18:16.02:0,16,392	1/1:4,14:17:35.98:312,36,0	1/1:9,8:17:29.96:257,30,0	0/0:25,1:26:49.13:0,49,754	0/0:23,0:23:57.15:0,57,630	0/1:14,2:16:12.97:13,0,325	0/1:7,1:8:5:5,0,170	0/0:27,0:27:34.71:0,35,567	0/0:15,1:16:16.05:0,16,397	1/1:2,15:17:32.99:286,33,0	1/1:1,18:20:53.03:449,53,0	1/1:0,10:10:26.99:234,27,0	0/0:26,2:29:30.95:0,31,552	0/0:20,2:22:8.06:0,8,545	0/0:30,1:30:42.50:0,43,677	0/0:12,0:12:30.08:0,30,332
chr10	100744912	.	GGT	G	412.27	PASS	AB=0.932;AC=19;AF=0.365;AN=52;BaseQRankSum=2.666;DP=493;FS=10.617;HRun=0;HaplotypeScore=90.0939;InbreedingCoeff=0.1924;MQ=66.90;MQ0=16;MQRankSum=-0.270;QD=1.72;ReadPosRankSum=0.898;VQSLOD=0.4582;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:2.44:6,2,0	0/0:6,0:6:2.94:0,3,18	0/0:32,0:21:0.47:0,0,1	0/0:34,0:17:0:0,0,0	0/1:20,0:21:8.93:9,0,60	0/1:15,3:17:16.20:16,0,160	0/0:21,0:20:15.05:0,15,220	0/0:19,0:18:4.25:0,4,29	0/0:11,0:16:14.78:0,15,130	0/0:19,0:19:9.01:0,9,98	./.	1/1:10,4:14:5.70:64,6,0	0/1:23,0:20:20.65:21,0,121	1/1:4,4:8:11.99:116,12,0	0/0:15,0:18:8.74:0,9,64	0/1:14,1:14:17.50:18,0,138	0/0:12,0:12:8.99:0,9,100	0/0:9,0:9:8.94:0,9,105	0/0:15,0:14:3.01:0,3,45	0/1:16,2:14:20.52:21,0,97	0/1:22,0:22:4.70:5,0,153	1/1:19,1:20:11.86:108,12,0	1/1:16,2:18:3.01:33,3,0	1/1:13,3:21:11.56:93,12,0	0/0:16,0:15:15.03:0,15,217	0/0:19,0:15:3.01:0,3,42	0/1:12,1:13:57.97:58,0,132	./.
chr10	100746718	.	T	TA	2613.47	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-7.710;DP=532;FS=6.695;HRun=9;HaplotypeScore=56.1012;InbreedingCoeff=0.9796;MQ=82.07;MQ0=0;MQRankSum=-0.465;QD=23.54;ReadPosRankSum=2.586;VQSLOD=4.6051;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:48.13:531,48,0	0/0:13,0:13:38.98:0,39,336	0/0:21,0:19:36.92:0,37,287	0/0:20,0:19:35.50:0,36,286	0/0:27,0:27:74.98:0,75,651	0/0:20,0:20:56.99:0,57,494	0/0:9,0:9:26.99:0,27,234	0/0:29,0:29:50.93:0,51,438	0/0:12,0:12:32.96:0,33,278	0/0:27,0:27:59.94:0,60,516	0/0:29,0:29:48.15:0,48,571	1/1:3,15:18:45.12:498,45,0	0/0:19,0:19:41.98:0,42,364	1/1:3,10:13:25.62:269,26,0	0/0:15,0:15:32.98:0,33,284	0/0:12,0:12:29.95:0,30,252	0/0:25,0:25:65.95:0,66,568	0/0:4,0:4:9:0,9,78	0/0:22,0:22:56.93:0,57,486	0/0:23,0:23:50.94:0,51,438	0/0:6,0:6:12:0,12,104	1/1:1,21:22:60.12:650,60,0	1/1:3,16:19:39.11:431,39,0	1/1:3,12:15:39.09:422,39,0	0/0:31,0:31:77.85:0,78,663	0/0:20,0:20:56.95:0,57,485	0/0:29,0:29:77.95:0,78,676	0/0:8,0:8:17.99:0,18,156
chr10	100746830	.	TTC	T	1109.09	PASS	AB=1.000;AC=30;AF=0.600;AN=50;BaseQRankSum=0.042;DP=456;FS=10.793;HRun=0;HaplotypeScore=74.5496;InbreedingCoeff=0.3905;MQ=67.48;MQ0=7;MQRankSum=3.413;QD=4.27;ReadPosRankSum=2.080;VQSLOD=1.0822;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:5.99:0,6,49	1/1:10,0:10:8.89:60,9,0	./.	0/0:23,0:15:0.14:0,0,0	./.	1/1:17,0:17:8.97:76,9,0	1/1:19,0:19:12.29:82,12,0	0/0:23,0:21:1.25:0,1,3	1/1:16,0:16:14.92:114,15,0	0/1:18,0:17:1.71:2,0,92	0/1:20,0:20:18.29:18,0,88	0/0:12,0:12:3:0,3,25	1/1:12,0:12:17.90:135,18,0	0/1:9,0:8:28.15:28,0,38	1/1:19,0:19:30.08:204,30,0	1/1:11,0:10:14.90:111,15,0	1/1:15,0:14:14.91:113,15,0	1/1:11,0:11:2.99:24,3,0	1/1:12,0:12:5.97:46,6,0	1/1:20,0:19:5.96:44,6,0	./.	0/0:20,0:19:8.99:0,9,74	1/1:17,0:17:4.36:56,4,0	0/0:15,0:15:14.88:0,15,144	1/1:18,0:18:3.69:143,4,0	0/1:16,0:16:8.84:9,0,98	0/0:23,0:23:2.57:0,3,19	0/0:9,0:9:3:0,3,26
chr10	100746876	.	C	CTG	340.78	PASS	AB=1.000;AC=21;AF=0.420;AN=50;BaseQRankSum=5.758;DP=477;FS=1.937;HRun=0;HaplotypeScore=99.5555;InbreedingCoeff=0.5742;MQ=43.14;MQ0=35;MQRankSum=-2.354;QD=1.62;ReadPosRankSum=-0.056;VQSLOD=1.9312;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:16:5.73:35,6,0	0/0:10,0:7:11.90:0,12,85	0/0:11,0:5:14.84:0,15,103	0/0:5,0:2:5.83:0,6,37	0/0:24,0:24:27.41:0,27,216	0/0:22,0:21:35.92:0,36,293	0/0:24,0:22:32.84:0,33,253	1/1:25,0:21:8.91:64,9,0	0/0:18,0:16:32.89:0,33,262	0/0:28,0:28:32.76:0,33,272	0/1:19,0:18:2.90:3,0,101	0/1:11,0:11:0:0,0,0	0/1:16,0:15:27.97:28,0,56	1/1:14,0:10:2.99:24,3,0	0/0:22,0:22:11.90:0,12,85	1/1:18,0:14:6.16:31,6,0	0/0:18,0:16:20.92:0,21,163	0/0:10,0:9:14.93:0,15,115	1/1:17,0:14:6:54,6,0	0/1:15,0:13:0:0,0,0	./.	./.	./.	1/1:16,0:13:8.97:71,9,0	0/0:25,0:23:17.75:0,18,143	0/1:20,0:17:11.93:59,0,12	1/1:17,0:16:15.64:97,16,0	1/1:6,0:5:5.93:41,6,0
chr10	100747281	.	A	AAAAAAAAAAAAAAGGAAATTGGTG	9084.06	PASS	AB=0.863;AC=19;AF=0.339;AN=56;BaseQRankSum=-5.519;DP=581;FS=20.557;HRun=0;HaplotypeScore=334.0130;InbreedingCoeff=0.4117;MQ=76.96;MQ0=0;MQRankSum=-1.079;QD=35.62;ReadPosRankSum=-7.817;VQSLOD=1.1157;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:99:145,0,2844	0/0:15,0:15:20.12:0,20,1963	0/0:14,0:13:32.15:0,32,847	0/0:13,0:13:16.22:0,16,822	0/0:25,0:25:75.17:0,75,3485	0/0:25,0:25:72.19:0,72,3584	0/0:18,0:18:54.09:0,54,1939	1/1:24,0:24:72.16:2064,72,0	0/0:20,0:20:57.14:0,57,2872	0/0:29,0:29:84.22:0,84,3278	0/0:25,0:25:75.13:0,75,3131	0/0:22,0:22:13.24:0,13,2864	0/0:21,0:21:63.20:0,63,3566	0/1:26,0:26:21.78:22,0,2717	0/1:26,0:26:21.73:22,0,3103	0/1:2,1:18:99:648,0,157	0/0:23,0:23:69.15:0,69,3385	0/0:19,0:19:54.09:0,54,2400	1/1:10,0:10:27.02:863,27,0	1/1:2,1:20:11.88:401,12,0	1/1:12,0:12:20.94:280,21,0	0/0:23,0:23:44.21:0,44,2785	0/1:18,0:18:45.82:46,0,1682	0/1:26,0:26:22.28:22,0,3208	0/0:34,0:34:96.24:0,96,4902	0/1:1,1:26:99:3364,0,122	1/1:0,1:13:9.50:1026,10,0	1/1:3,0:3:9.02:182,9,0
chr10	100749702	.	T	TA	41.05	PASS	AB=0.885;AC=5;AF=0.089;AN=56;BaseQRankSum=-1.502;DP=592;FS=11.834;HRun=0;HaplotypeScore=78.1613;InbreedingCoeff=-0.1003;MQ=84.74;MQ0=0;MQRankSum=-0.448;QD=0.66;ReadPosRankSum=-3.439;VQSLOD=-0.6125;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:99:0,102,1388	0/0:14,0:14:42.14:0,42,584	0/0:18,0:19:48.09:0,48,624	0/0:25,0:25:67.76:0,68,890	0/0:20,0:20:54.13:0,54,751	0/0:33,0:33:99:0,99,1384	0/0:20,0:20:60.20:0,60,838	0/1:14,2:16:54.28:54,0,407	0/0:22,0:22:66.21:0,66,908	0/0:27,0:27:75.22:0,75,1027	0/0:22,0:22:66.21:0,66,908	0/0:31,0:31:93.31:0,93,1300	0/0:21,0:21:63.21:0,63,881	0/0:25,0:25:69.17:0,69,911	0/0:23,0:23:69.20:0,69,904	0/1:6,4:10:19.64:20,0,230	0/0:25,0:25:69.18:0,69,926	0/0:30,0:30:81.25:0,81,1113	0/0:8,0:8:24.08:0,24,335	0/1:15,2:17:43.27:43,0,551	0/1:6,0:6:29.48:29,0,152	0/0:28,0:28:84.27:0,84,1157	0/0:26,0:26:75.25:0,75,1048	0/0:26,0:26:75.23:0,75,1017	0/0:26,0:26:78.26:0,78,1091	0/1:12,1:13:8.85:9,0,448	0/0:21,2:23:15.26:0,15,752	0/0:2,0:2:6.02:0,6,84
chr10	100752078	.	T	TC	8739.44	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-15.134;DP=667;FS=19.507;HRun=0;HaplotypeScore=62.6952;InbreedingCoeff=0.9948;MQ=84.07;MQ0=0;MQRankSum=-4.956;QD=43.92;ReadPosRankSum=4.441;VQSLOD=2.8910;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:99:1769,111,0	1/1:0,14:14:42.14:670,42,0	0/0:21,0:21:63.20:0,63,836	0/0:19,0:19:50.75:0,51,563	0/0:29,0:29:84.28:0,84,1175	0/0:26,0:26:78.25:0,78,1074	0/0:25,0:25:75.21:0,75,997	0/0:32,0:32:93.30:0,93,1272	0/0:28,0:28:78.25:0,78,1075	0/0:25,0:25:75.23:0,75,1007	0/0:22,0:22:66.21:0,66,905	1/1:0,24:24:69.24:1102,69,0	0/0:23,0:23:69.17:0,69,908	1/1:1,16:17:45.15:717,45,0	1/1:0,24:24:63.21:1001,63,0	0/0:19,0:19:57.19:0,57,797	0/0:30,0:30:90.28:0,90,1237	0/0:13,0:13:36.09:0,36,482	0/0:22,0:22:66.22:0,66,923	0/0:31,0:31:93.25:0,93,1231	0/0:15,0:15:42.14:0,42,586	1/1:0,29:29:75.17:1166,75,0	1/1:2,24:26:66.12:1021,66,0	1/1:0,27:27:81.28:1293,81,0	0/0:28,0:28:84.27:0,84,1159	0/0:28,0:28:84.27:0,84,1160	0/0:28,0:28:84.22:0,84,1118	0/0:4,0:4:12.04:0,12,168
chr10	100752785	.	TA	T	2768.51	PASS	AB=0.919;AC=18;AF=0.321;AN=56;BaseQRankSum=14.103;DP=543;FS=0.376;HRun=11;HaplotypeScore=73.3799;InbreedingCoeff=0.8736;MQ=82.31;MQ0=0;MQRankSum=-2.195;QD=15.38;ReadPosRankSum=3.643;VQSLOD=4.3756;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:71.92:591,72,0	1/1:0,10:10:29.97:246,30,0	0/1:18,1:18:1.77:2,0,166	0/0:22,1:22:7.06:0,7,200	0/0:26,0:27:69:0,69,711	0/0:26,0:26:60.15:0,60,640	0/1:14,2:16:4.30:4,0,354	0/0:31,0:30:72.12:0,72,733	0/0:17,0:17:48.10:0,48,497	0/0:20,0:20:45.08:0,45,464	0/0:20,1:21:32.36:0,32,529	1/1:4,15:19:41.94:345,42,0	0/0:17,1:18:20.46:0,20,416	1/1:0,9:10:26:203,26,0	1/1:4,19:24:52.97:425,53,0	0/0:24,0:24:57.13:0,57,599	0/0:20,0:21:50.96:0,51,526	0/0:8,0:8:21.05:0,21,224	0/0:16,0:16:34.57:0,35,361	0/0:23,0:23:60.14:0,60,633	0/0:9,0:9:27.07:0,27,288	1/1:4,21:25:62.92:517,63,0	1/1:0,15:15:41.95:345,42,0	1/1:1,13:14:35.94:296,36,0	0/0:19,1:20:29.48:0,29,512	0/0:30,2:32:37.77:0,38,784	0/0:17,0:16:39.10:0,39,416	0/0:10,0:10:27.05:0,27,288
chr10	100753979	.	G	GGTTT	21675.43	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=3.376;DP=644;FS=0.000;HRun=0;HaplotypeScore=108.5405;InbreedingCoeff=0.9876;MQ=81.43;MQ0=0;MQRankSum=-8.786;QD=56.74;ReadPosRankSum=0.143;VQSLOD=5.8119;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,23:30:69.24:1744,69,0	1/1:2,7:9:24.08:606,24,0	0/0:24,0:24:44.58:0,45,657	0/0:21,0:21:27.05:0,27,433	0/0:24,0:24:60.21:0,60,1049	0/0:35,0:35:90.31:0,90,1572	0/0:16,0:16:39.13:0,39,682	1/1:16,23:42:93.31:2233,93,0	0/0:15,0:15:42.14:0,42,734	0/0:23,0:23:57.18:0,57,971	0/0:21,0:21:54.17:0,54,918	1/1:4,20:25:54.18:1341,54,0	0/0:27,0:27:78.27:0,78,1358	1/1:8,14:23:45.15:1110,45,0	1/1:7,22:29:66.23:1677,66,0	1/1:8,21:30:24.64:1668,25,0	0/0:24,0:23:60.19:0,60,1021	0/0:8,0:8:21.07:0,21,368	1/1:14,13:28:63.21:1410,63,0	1/1:4,18:22:57.20:1446,57,0	1/1:2,17:19:48.16:1150,48,0	1/1:3,15:18:48.16:1145,48,0	1/1:1,18:20:41.57:1070,42,0	1/1:2,7:10:24.08:571,24,0	0/0:24,0:24:69.23:0,69,1182	1/1:5,14:22:7.58:1237,8,0	1/1:12,27:40:90.31:2272,90,0	1/1:2,13:15:39.13:996,39,0
chr10	100754965	.	A	AGTGG	20102.85	PASS	AB=0.553;AC=31;AF=0.554;AN=56;BaseQRankSum=-7.333;DP=671;FS=7.331;HRun=0;HaplotypeScore=103.0326;InbreedingCoeff=0.9258;MQ=61.95;MQ0=0;MQRankSum=-4.332;QD=52.76;ReadPosRankSum=1.852;VQSLOD=6.0134;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,41:45:90.31:2276,90,0	1/1:1,8:9:21.07:541,21,0	0/0:12,0:11:33.11:0,33,571	0/0:21,0:21:54.17:0,54,899	0/0:24,0:24:59.78:0,60,976	0/0:17,0:16:48.16:0,48,841	0/0:29,0:29:81.24:0,81,1370	1/1:6,17:23:51.15:1141,51,0	0/0:23,0:23:66.23:0,66,1172	0/0:29,0:29:81.27:0,81,1383	0/0:13,0:13:33.10:0,33,558	1/1:6,19:26:54.19:1365,54,0	0/0:21,0:21:51.17:0,51,893	1/1:1,17:22:42.14:1075,42,0	1/1:4,22:27:63.22:1609,63,0	1/1:2,19:21:51.17:1270,51,0	0/0:50,0:50:76.23:0,76,2250	0/0:28,0:28:66.13:0,66,1077	1/1:5,14:19:42.08:904,42,0	1/1:4,22:27:66.23:1656,66,0	1/1:0,37:37:71.62:1855,72,0	1/1:2,13:16:33.11:829,33,0	1/1:2,9:13:26.76:684,27,0	1/1:2,39:41:86.44:2243,86,0	0/0:23,0:23:60.21:0,60,1058	0/1:4,16:21:44.51:1243,0,45	1/1:4,20:24:39.09:948,39,0	1/1:1,7:8:18.06:465,18,0
chr10	100755935	.	TA	T	7973.22	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=15.661;DP=585;FS=2.288;HRun=8;HaplotypeScore=72.8336;InbreedingCoeff=0.9806;MQ=73.22;MQ0=0;MQRankSum=-1.366;QD=24.16;ReadPosRankSum=0.726;VQSLOD=5.6230;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:66.11:637,66,0	1/1:1,9:10:24.04:232,24,0	0/0:15,0:14:17.92:0,18,212	0/0:8,0:8:6.16:0,6,154	0/0:29,0:29:78.24:0,78,940	0/0:23,0:23:66.16:0,66,780	0/0:12,0:12:30.09:0,30,362	1/1:6,22:28:66.10:637,66,0	0/0:18,0:18:48.15:0,48,580	0/0:39,0:39:99:0,111,1316	0/0:24,0:24:66.20:0,66,794	1/1:0,11:11:30.05:290,30,0	0/0:26,0:26:69.20:0,69,821	1/1:4,15:19:39.06:377,39,0	1/1:2,15:17:30.04:289,30,0	1/1:2,30:32:78.12:753,78,0	0/0:18,0:18:45.14:0,45,544	0/0:12,0:12:30.09:0,30,359	1/1:2,16:18:48.03:453,48,0	1/1:2,30:32:81.12:782,81,0	1/1:1,13:14:39.06:376,39,0	1/1:3,25:28:69.10:666,69,0	1/1:3,17:20:48.07:461,48,0	1/1:0,5:5:15.02:145,15,0	0/0:30,0:30:84.26:0,84,1012	1/1:2,24:26:38.88:659,39,0	1/1:3,36:39:99:1043,108,0	1/1:2,6:8:18.03:174,18,0
chr10	100756114	.	TG	T	2750.48	PASS	AB=0.940;AC=18;AF=0.321;AN=56;BaseQRankSum=5.577;DP=725;FS=20.856;HRun=2;HaplotypeScore=106.5639;InbreedingCoeff=0.8104;MQ=54.50;MQ0=58;MQRankSum=-6.122;QD=11.96;ReadPosRankSum=-4.324;VQSLOD=0.1319;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:44,1:45:81.85:0,82,654	0/0:11,0:10:20.84:0,21,218	0/0:27,0:6:17.47:0,17,164	0/0:31,0:10:21.06:0,21,270	0/0:29,0:29:80.62:0,81,1084	0/0:20,0:19:41.50:0,41,556	0/0:30,1:30:50.09:0,50,1121	1/1:0,26:26:78.25:993,78,0	0/0:19,0:19:57.12:0,57,764	0/0:28,0:25:71.95:0,72,940	0/0:24,0:22:46.94:0,47,598	0/0:16,1:16:23.02:0,23,244	0/0:28,0:26:73.26:0,73,950	0/0:21,0:21:38.01:0,38,396	0/1:16,1:14:14.83:15,0,167	1/1:5,18:14:27.08:326,27,0	0/0:38,2:40:74.87:0,75,1222	0/1:27,2:29:10.60:11,0,742	1/1:2,12:11:33.07:401,33,0	1/1:3,22:16:20.53:261,21,0	1/1:6,36:20:18.06:224,18,0	0/0:22,0:22:41.22:0,41,287	0/0:22,0:21:35.76:0,36,298	0/0:56,1:57:56.37:0,56,676	0/0:23,0:23:45.67:0,46,889	1/1:5,24:18:9.12:543,9,0	1/1:13,3:13:8.99:80,9,0	1/1:2,7:6:9.01:100,9,0
chr10	100756115	.	GGTGT	G	2791.08	PASS	AB=0.978;AC=22;AF=0.393;AN=56;BaseQRankSum=6.364;DP=739;FS=3.520;HRun=0;HaplotypeScore=135.8698;InbreedingCoeff=0.5273;MQ=54.27;MQ0=57;MQRankSum=0.717;QD=8.43;ReadPosRankSum=3.274;VQSLOD=2.9221;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:45:7.63:0,8,262	0/0:5,0:10:12.02:0,12,181	0/0:27,0:6:3.01:0,3,57	0/0:34,0:10:5.99:0,6,49	0/0:28,0:29:50.87:0,51,1065	0/1:20,1:20:25.47:25,0,399	0/0:31,0:31:60.18:0,60,1242	0/0:28,0:28:25.72:0,26,170	0/0:19,0:19:44.98:0,45,896	0/0:28,0:25:57.19:0,57,1238	0/1:22,0:21:12.62:13,0,595	1/1:10,6:17:34.33:439,34,0	0/0:28,0:26:59.74:0,60,1146	1/1:10,11:22:17.89:236,18,0	0/0:5,0:17:9.86:0,10,206	0/1:21,0:15:61.61:66,0,62	0/0:39,0:40:2.14:0,2,1351	0/0:26,0:29:46.33:0,46,642	0/0:13,0:12:8.09:0,8,38	1/1:23,0:17:8.10:52,8,0	1/1:37,0:20:1.54:4,2,0	1/1:5,17:22:36.12:583,36,0	1/1:7,14:21:11.46:328,11,0	1/1:18,36:57:72.20:1109,72,0	0/0:21,0:23:19.05:0,19,850	0/1:26,0:18:25.46:25,0,137	1/1:3,0:13:8.99:75,9,0	1/1:7,0:6:2.98:25,3,0
chr10	100756138	.	GTGTGTGTA	G	1854.53	PASS	AB=0.959;AC=12;AF=0.214;AN=56;BaseQRankSum=1.134;DP=715;FS=39.412;HRun=0;HaplotypeScore=183.5258;InbreedingCoeff=0.5916;MQ=51.97;MQ0=46;MQRankSum=-2.436;QD=9.51;ReadPosRankSum=-4.586;VQSLOD=-0.4957;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:73.03:0,73,1421	0/0:10,0:10:18.01:0,18,398	0/0:23,0:9:20.93:0,21,281	0/0:29,0:13:23.07:0,23,303	0/0:24,0:24:51.16:0,51,1848	0/0:21,0:20:45.65:0,46,1034	0/0:32,0:31:87.12:0,87,2162	0/1:29,0:29:18.18:261,0,18	0/0:26,0:26:66.12:0,66,1797	0/0:25,0:25:69.20:0,69,2230	0/0:20,0:18:42.08:0,42,1050	0/0:22,0:21:36.89:0,37,520	0/0:25,0:23:63.14:0,63,2014	0/0:17,0:17:22.48:0,22,302	0/0:27,0:24:39.52:0,40,794	1/1:28,4:24:5.21:500,5,0	0/0:39,0:39:98.57:0,99,2848	0/0:22,0:22:39.98:0,40,1026	1/1:16,0:12:24.04:196,24,0	0/1:24,3:20:3.01:234,0,3	0/1:28,1:15:5.19:85,0,5	0/0:22,0:22:51.08:0,51,540	0/0:20,0:19:36.04:0,36,390	0/0:53,0:53:41.54:0,42,1068	0/0:24,0:24:59.87:0,60,1715	0/1:29,1:21:99:243,0,201	1/1:22,2:22:28.12:411,28,0	1/1:7,1:6:6:89,6,0
chr10	100756991	.	TG	T	1997.32	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=15.356;DP=634;FS=9.973;HRun=2;HaplotypeScore=108.3009;InbreedingCoeff=0.5479;MQ=69.85;MQ0=1;MQRankSum=-8.008;QD=6.15;ReadPosRankSum=0.472;VQSLOD=-0.1526;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:41.24:75,0,41	0/0:7,0:7:0.01:0,0,1	0/0:20,0:17:34.74:0,35,420	0/0:21,0:16:28.22:0,28,261	0/0:28,0:28:84.25:0,84,1181	0/0:31,0:31:93.19:0,93,1218	0/0:22,0:22:65.18:0,65,867	1/1:20,5:25:47.76:343,48,0	0/0:17,0:17:51.11:0,51,697	0/0:22,0:22:60.15:0,60,779	0/0:22,0:22:41.66:0,42,726	0/1:20,0:20:11.83:12,0,48	0/0:32,0:32:96.21:0,96,1295	0/1:18,0:18:24.52:25,0,47	0/1:28,0:28:24.50:25,0,40	1/1:18,4:22:37.29:230,37,0	0/0:28,0:28:80.08:0,80,1180	0/0:27,1:28:55.38:0,55,992	1/1:9,4:13:31.17:207,31,0	1/1:19,3:22:48.22:286,48,0	1/1:13,1:16:34.51:206,35,0	1/1:17,0:16:11.95:34,12,0	0/1:32,0:32:26.23:26,0,31	0/1:25,0:25:9.67:10,0,55	0/0:30,0:30:90.24:0,90,1287	1/1:17,3:21:47.41:286,47,0	1/1:17,3:20:47.75:269,48,0	1/1:11,0:11:30.60:171,31,0
chr10	100756992	.	G	GTT	3048.34	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.717;DP=642;FS=22.629;HRun=2;HaplotypeScore=121.5445;InbreedingCoeff=0.9965;MQ=68.97;MQ0=1;MQRankSum=-4.393;QD=19.67;ReadPosRankSum=-3.779;VQSLOD=-0.4694;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:76.58:0,77,1204	0/0:7,0:7:21.07:0,21,318	0/0:20,0:17:35.38:0,35,530	0/0:22,0:16:17.47:0,17,320	0/0:28,0:28:84.27:0,84,1325	0/0:32,0:32:93.29:0,93,1438	0/0:23,0:23:65.21:0,65,1001	1/1:18,1:22:31.12:305,31,0	0/0:17,0:17:51.17:0,51,827	0/0:21,0:22:60.20:0,60,938	0/0:22,0:22:45.88:0,46,880	0/0:19,0:19:48.16:0,48,698	0/0:33,0:33:96.26:0,96,1445	0/0:18,0:18:44.44:0,44,671	0/0:29,0:29:52.80:0,53,871	1/1:7,15:23:31.31:367,31,0	0/0:28,0:28:84.29:0,84,1362	0/0:28,0:28:40.11:0,40,1159	1/1:9,4:13:30.15:354,30,0	1/1:12,8:23:40.22:445,40,0	1/1:6,10:16:26.45:389,26,0	0/0:17,0:16:21.96:0,22,514	0/0:32,0:32:59.03:0,59,1056	0/0:25,0:25:60.19:0,60,865	0/0:31,0:31:90.31:0,90,1447	1/1:11,10:24:45.95:451,46,0	1/1:11,10:21:44.08:590,44,0	1/1:3,8:12:25.31:356,25,0
chr10	100756993	.	GT	G	3611.39	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=4.850;DP=655;FS=11.251;HRun=10;HaplotypeScore=111.3759;InbreedingCoeff=0.9152;MQ=68.48;MQ0=1;MQRankSum=-0.940;QD=20.18;ReadPosRankSum=3.814;VQSLOD=3.0925;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,30:34:86.96:754,87,0	1/1:0,7:7:21:182,21,0	0/0:18,2:17:0.67:0,1,181	0/0:22,0:17:5.60:0,6,123	0/0:30,0:30:81.20:0,81,880	0/0:32,0:32:75.18:0,75,814	0/0:23,0:23:60.14:0,60,649	0/0:23,0:23:27.33:0,27,157	0/0:18,0:18:44.11:0,44,486	0/0:22,0:22:48.07:0,48,508	0/0:21,1:22:5.34:0,5,489	1/1:3,15:18:38.98:338,39,0	0/0:32,0:32:87.22:0,87,951	1/1:3,15:18:41.98:364,42,0	1/1:3,26:29:56.98:494,57,0	0/0:23,0:23:18.57:0,19,115	0/0:29,1:30:58.15:0,58,855	0/0:25,0:27:41.31:0,41,663	0/0:13,0:13:11.77:0,12,51	0/0:28,0:28:39.17:0,39,184	0/0:17,0:17:27.84:0,28,150	1/1:1,16:16:44.98:388,45,0	1/1:2,30:32:74.25:648,74,0	1/1:2,22:24:50.98:443,51,0	0/0:30,0:31:83.29:0,83,946	0/0:28,0:28:31.70:0,32,193	0/0:22,0:21:22.89:0,23,134	0/0:12,0:12:22.73:0,23,114
chr10	100757117	.	T	TCAGTGAACAC	49358.81	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=2.137;DP=787;FS=0.280;HRun=0;HaplotypeScore=236.0555;InbreedingCoeff=0.9972;MQ=72.39;MQ0=0;MQRankSum=-21.180;QD=106.61;ReadPosRankSum=-4.015;VQSLOD=3.9647;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,18:35:84.25:3782,84,0	1/1:5,9:15:45.15:2011,45,0	0/0:21,0:21:54.16:0,54,1481	0/0:21,0:21:57.01:0,57,1465	0/0:30,0:30:87.30:0,87,2819	0/0:18,0:18:48.15:0,48,1517	0/0:27,0:27:72.23:0,72,2277	1/1:17,5:28:81.27:3101,81,0	0/0:29,0:29:81.28:0,81,2580	0/0:28,0:28:81.26:0,81,2526	0/0:25,0:25:69.22:0,69,2154	1/1:16,16:34:86.88:4061,87,0	0/0:47,0:47:99:0,138,4265	1/1:13,22:37:99:4793,99,0	1/1:16,23:49:99:5053,105,0	1/1:12,21:35:84.29:3907,84,0	0/0:33,0:33:96.30:0,96,3069	0/0:26,0:26:78.22:0,78,2300	1/1:12,9:22:48.16:2126,48,0	1/1:16,25:44:99:5563,117,0	1/1:14,15:33:57.01:2618,57,0	1/1:4,14:22:48.16:2253,48,0	1/1:7,14:23:54.19:2500,54,0	1/1:9,13:26:21.23:589,21,0	0/0:19,0:19:54.18:0,54,1696	1/1:13,12:29:87.28:3732,87,0	1/1:11,11:26:54.19:2580,54,0	1/1:1,4:5:15.05:692,15,0
chr10	100757376	.	TCCAGTGAATAA	T	8654.59	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.771;DP=697;FS=6.096;HRun=0;HaplotypeScore=237.9152;InbreedingCoeff=0.9983;MQ=87.78;MQ0=0;MQRankSum=-13.949;QD=69.24;ReadPosRankSum=1.702;VQSLOD=4.1330;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,21:28:66.22:1979,66,0	0/0:10,0:10:30.10:0,30,1705	0/0:24,0:24:69.24:0,69,3439	0/0:31,0:31:78.28:0,78,4157	0/0:28,0:28:78.25:0,78,4229	0/0:35,0:35:99:0,102,5639	0/0:32,0:32:93.32:0,93,5115	0/0:23,0:23:66.23:0,66,3511	0/0:39,0:39:99:0,117,6126	0/0:22,0:22:63.12:0,63,3284	0/0:24,0:24:60.20:0,60,3382	1/1:5,24:29:60.21:2140,60,0	0/0:30,0:30:87.30:0,87,4942	1/1:1,23:24:57.20:2034,57,0	0/0:35,0:35:99:0,105,5882	0/0:32,0:32:90.31:0,90,5032	0/0:36,0:36:99:0,108,5845	0/0:20,0:20:54.18:0,54,2901	0/0:19,0:19:54.18:0,54,2697	0/0:21,0:21:55.50:0,55,3128	0/0:22,0:22:63.20:0,63,3200	1/1:0,10:10:24.08:855,24,0	1/1:1,10:11:21.07:682,21,0	1/1:6,17:23:27.51:964,28,0	0/0:26,0:26:75.24:0,75,3861	0/0:27,0:27:78.27:0,78,4432	0/0:27,0:27:81.28:0,81,4457	0/0:9,0:9:27.09:0,27,1552
chr10	100760584	.	G	GAC	159.08	PASS	AB=0.979;AC=12;AF=0.214;AN=56;BaseQRankSum=11.917;DP=764;FS=4.015;HRun=0;HaplotypeScore=155.3170;InbreedingCoeff=-0.0932;MQ=54.90;MQ0=10;MQRankSum=-10.126;QD=0.54;ReadPosRankSum=-0.310;VQSLOD=2.7049;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:5.34:22,5,0	0/1:9,0:9:17.57:18,0,30	0/0:46,0:22:63.20:0,63,838	0/0:37,0:19:45.07:0,45,555	0/0:21,0:21:63.20:0,63,845	0/0:34,0:34:99:0,99,1305	0/0:33,0:33:96.32:0,96,1316	0/1:41,1:37:33.08:33,0,752	0/0:37,0:37:99:0,99,1317	0/0:34,0:34:90.30:0,90,1229	0/0:23,0:23:69.22:0,69,927	0/1:18,0:18:7.63:8,0,54	0/0:39,0:39:99:0,107,1393	0/1:32,1:33:7.39:7,0,374	0/1:37,0:37:74.19:74,0,78	0/1:25,0:25:50.07:50,0,74	0/0:25,0:25:52.57:0,53,848	0/0:18,0:18:45.09:0,45,593	0/0:12,0:12:25.71:0,26,313	0/1:31,2:33:4.78:5,0,62	0/0:28,1:29:9.02:0,9,121	0/0:20,0:20:3.89:0,4,105	0/0:15,1:16:3.47:0,3,26	0/1:33,0:33:3.05:3,0,128	0/0:29,0:29:72.16:0,72,904	0/0:15,0:15:14.70:0,15,258	0/1:23,0:23:17.68:18,0,65	0/1:8,1:9:59.02:63,0,59
chr10	100760590	.	G	GACACAGACACACACACA	9425.31	PASS	AB=0.680;AC=29;AF=0.518;AN=56;BaseQRankSum=2.988;DP=886;FS=3.673;HRun=0;HaplotypeScore=310.9288;InbreedingCoeff=0.6274;MQ=52.93;MQ0=13;MQRankSum=-5.767;QD=19.27;ReadPosRankSum=-0.027;VQSLOD=3.2305;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:40:11.07:376,11,0	0/1:1,0:16:33.70:92,0,34	0/0:50,0:22:47.80:0,48,771	0/0:40,0:15:36.10:0,36,740	0/0:22,0:22:66.20:0,66,2687	0/0:37,0:37:99:0,99,3647	0/0:34,0:34:96.33:0,96,3327	1/1:39,0:34:67.67:817,68,0	0/0:35,0:35:93.20:0,93,3066	0/0:34,0:34:90.07:0,90,3086	0/0:25,0:25:60.19:0,60,2353	1/1:2,0:29:6.02:406,6,0	0/0:38,0:38:99:0,102,3571	1/1:32,0:32:17.36:326,17,0	0/1:4,0:43:27.52:1116,0,28	1/1:2,0:37:24.08:1560,24,0	0/0:25,0:25:62.83:0,63,2306	0/0:17,0:17:42.13:0,42,1527	1/1:5,0:19:3.71:985,4,0	1/1:4,0:46:4.80:387,5,0	0/0:8,0:40:3.48:0,3,82	1/1:4,0:30:1.29:209,1,0	1/1:5,0:27:1.55:23,2,0	1/1:6,1:33:8.57:415,9,0	0/1:26,0:27:57.07:57,0,2247	1/1:1,0:25:30.68:1272,31,0	1/1:2,0:28:13.20:745,13,0	1/1:4,0:17:12.04:639,12,0
chr10	100760594	.	C	CAG	1553.35	PASS	AB=0.970;AC=17;AF=0.304;AN=56;BaseQRankSum=12.555;DP=815;FS=0.422;HRun=0;HaplotypeScore=162.1513;InbreedingCoeff=0.0369;MQ=51.89;MQ0=13;MQRankSum=-6.270;QD=3.96;ReadPosRankSum=0.638;VQSLOD=2.8863;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:13.93:53,0,14	0/1:16,0:16:15.73:16,0,30	0/0:46,0:18:48.12:0,48,578	0/0:39,0:15:36.07:0,36,443	0/0:23,0:23:69.20:0,69,1009	0/0:35,0:35:99:0,102,1535	0/0:33,0:33:99:0,99,1488	0/1:19,17:32:37.59:478,0,38	0/0:34,0:34:96.17:0,96,1289	0/0:33,0:33:91.84:0,92,1326	0/0:22,0:22:63.20:0,63,939	0/1:25,0:25:14.89:53,0,15	0/0:40,0:40:99:0,111,1543	0/1:33,0:33:61.22:161,0,61	0/1:45,0:45:82.32:95,0,82	1/1:33,0:33:26.76:229,27,0	0/0:26,0:26:69.05:0,69,912	0/0:15,0:15:45.07:0,45,639	0/1:14,0:14:88.18:114,0,88	0/1:43,0:43:28.46:78,0,28	0/0:25,1:26:2.90:0,3,46	0/1:26,0:26:31.70:32,0,55	0/0:24,0:24:5.95:0,6,49	1/1:23,0:23:9.01:87,9,0	0/0:27,0:27:74.94:0,75,1029	0/1:24,0:24:99:118,0,118	0/1:22,0:22:28.92:90,0,29	1/1:16,0:15:17.45:124,17,0
chr10	100762207	.	A	AT	822.10	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.440;DP=583;FS=0.767;HRun=6;HaplotypeScore=52.5724;InbreedingCoeff=0.9965;MQ=69.00;MQ0=0;MQRankSum=-0.215;QD=26.52;ReadPosRankSum=0.119;VQSLOD=3.7172;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:42.08:0,42,422	1/1:2,12:14:30.10:377,30,0	0/0:12,0:12:24.05:0,24,245	0/0:11,0:11:23.82:0,24,211	0/0:36,0:36:93.19:0,93,942	0/0:22,0:22:57.13:0,57,582	0/0:17,0:17:42.08:0,42,421	0/0:34,0:34:93.20:0,93,943	0/0:12,0:12:36.08:0,36,367	0/0:35,0:35:93.21:0,93,949	0/0:27,0:27:75.15:0,75,758	0/0:15,0:15:42.09:0,42,429	0/0:24,0:24:69.13:0,69,695	0/0:15,0:15:39.09:0,39,398	1/1:1,16:17:45.14:566,45,0	0/0:19,0:19:51.11:0,51,520	0/0:26,0:26:72.14:0,72,727	0/0:17,0:17:42.05:0,42,418	0/0:20,0:20:48.11:0,48,490	0/0:22,0:22:54.12:0,54,551	0/0:9,0:9:27.06:0,27,275	0/0:31,0:31:90.20:0,90,913	0/0:20,0:20:57.13:0,57,582	0/0:12,0:12:33.04:0,33,326	0/0:33,0:33:87.16:0,87,878	0/0:27,0:27:81.18:0,81,827	0/0:27,0:26:66.12:0,66,663	0/0:12,0:12:30.07:0,30,304
chr10	100762963	.	CG	C	5128.43	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=17.018;DP=707;FS=0.714;HRun=3;HaplotypeScore=87.6121;InbreedingCoeff=1.0000;MQ=85.01;MQ0=0;MQRankSum=-1.800;QD=32.67;ReadPosRankSum=2.254;VQSLOD=5.1794;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:69.22:854,69,0	0/0:14,0:14:42.14:0,42,604	0/0:23,0:23:37.24:0,37,803	0/0:22,0:22:57.15:0,57,766	0/0:23,0:23:69.21:0,69,957	0/0:34,0:34:99:0,102,1431	0/0:21,0:21:54.16:0,54,758	0/0:27,0:27:75.25:0,75,1063	0/0:19,0:19:57.19:0,57,821	0/0:35,0:35:99:0,105,1511	0/0:17,0:17:51.15:0,51,715	1/1:0,35:35:96.30:1190,96,0	0/0:26,0:26:75.22:0,75,1041	1/1:1,26:27:66.21:818,66,0	0/0:32,0:32:93.31:0,93,1338	0/0:20,0:20:60.19:0,60,844	0/0:30,0:30:90.30:0,90,1294	0/0:18,0:18:54.16:0,54,751	0/0:22,0:22:60.18:0,60,826	0/0:27,0:27:78.25:0,78,1103	0/0:31,0:31:93.27:0,93,1274	1/1:1,22:23:54.17:669,54,0	1/1:1,17:18:48.15:593,48,0	1/1:1,28:29:81.25:1004,81,0	0/0:27,0:27:72.23:0,72,1019	0/0:33,0:33:99:0,99,1409	0/0:34,0:34:99:0,99,1424	0/0:15,0:15:45.15:0,45,638
chr10	100765500	.	GGT	G	1214.13	PASS	AB=0.911;AC=24;AF=0.462;AN=52;BaseQRankSum=-1.923;DP=516;FS=9.284;HRun=0;HaplotypeScore=96.6638;InbreedingCoeff=0.0995;MQ=61.11;MQ0=11;MQRankSum=1.803;QD=3.77;ReadPosRankSum=3.412;VQSLOD=0.8581;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:37:24.43:0,24,506	1/1:7,0:7:2.84:16,3,0	./.	./.	1/1:22,6:29:14.59:145,15,0	1/1:7,10:17:14.87:146,15,0	1/1:9,2:13:1.35:77,1,0	0/1:14,2:16:23.89:24,0,33	1/1:9,1:11:4.67:57,5,0	0/1:16,3:19:82.71:83,0,149	0/1:14,0:15:9.58:10,0,181	0/0:7,0:9:18:0,18,175	0/1:7,1:7:30.63:66,0,31	0/0:9,0:14:15.44:0,15,126	1/1:8,0:7:5.86:34,6,0	0/0:2,0:2:3.01:0,3,36	1/1:15,14:35:35.54:370,36,0	0/1:18,10:31:82.48:220,0,82	0/0:16,0:15:14.92:0,15,134	0/0:16,0:15:6.02:0,6,76	0/1:33,2:34:32.29:32,0,264	0/0:13,0:17:9.15:0,9,155	0/0:22,0:23:8.99:0,9,75	0/0:17,0:24:24:0,24,218	0/1:17,1:19:53.10:53,0,193	0/1:23,0:22:4.92:5,0,162	0/1:14,0:14:37.42:37,0,54	0/1:18,1:18:5.31:5,0,200
chr10	100766567	.	AAT	A	9648.98	PASS	AB=0.886;AC=34;AF=0.607;AN=56;BaseQRankSum=15.584;DP=574;FS=3.098;HRun=0;HaplotypeScore=88.6444;InbreedingCoeff=0.7231;MQ=66.54;MQ0=0;MQRankSum=1.072;QD=24.61;ReadPosRankSum=1.267;VQSLOD=5.7453;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,28:32:69.22:855,69,0	1/1:1,15:16:39.12:484,39,0	0/1:8,0:6:4.48:4,0,51	0/1:7,0:6:5.64:6,0,30	0/0:33,0:33:84.29:0,84,1367	0/0:16,0:16:45.14:0,45,714	0/1:16,1:17:7.10:7,0,410	1/1:14,32:47:96.05:1074,96,0	0/0:13,0:13:27.09:0,27,443	0/0:30,0:30:78.26:0,78,1251	0/0:18,0:18:45.15:0,45,724	1/1:2,21:24:54:646,54,0	0/0:18,0:18:45.15:0,45,734	1/1:2,15:17:39.08:466,39,0	1/1:6,18:24:48.15:595,48,0	1/1:5,15:20:42.13:521,42,0	0/0:18,0:18:42.14:0,42,681	0/0:14,0:14:42.14:0,42,678	1/1:1,15:16:48.12:569,48,0	1/1:6,28:34:84.15:990,84,0	1/1:7,17:24:48.15:595,48,0	1/1:1,15:16:45:505,45,0	1/1:6,11:17:30.09:372,30,0	0/1:1,2:3:40.16:65,0,40	0/0:22,0:22:54.17:0,54,861	1/1:4,16:20:1.90:518,2,0	1/1:6,28:34:75.24:930,75,0	1/1:0,16:16:36.11:446,36,0
chr10	100770065	.	A	AT	2661.71	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.114;DP=543;FS=5.920;HRun=6;HaplotypeScore=77.6742;InbreedingCoeff=0.9958;MQ=71.49;MQ0=0;MQRankSum=-1.533;QD=28.93;ReadPosRankSum=0.434;VQSLOD=4.2352;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:17:45.14:565,45,0	0/0:8,0:8:18.03:0,18,183	0/0:17,0:17:42.09:0,42,428	0/0:14,0:14:16.84:0,17,222	0/0:29,0:29:84.19:0,84,856	0/0:39,0:39:99:0,114,1162	0/0:13,0:13:33.07:0,33,336	0/0:42,0:42:99:0,105,1065	0/0:20,0:20:51.11:0,51,520	0/0:22,0:22:60.13:0,60,607	0/0:19,0:19:48.11:0,48,490	1/1:1,14:15:39.12:490,39,0	0/0:15,0:15:39.09:0,39,398	1/1:1,15:16:42.13:527,42,0	0/0:19,0:19:57.10:0,57,567	0/0:18,0:18:51.11:0,51,520	0/0:20,0:20:57.12:0,57,580	0/0:20,0:20:54.08:0,54,539	0/0:17,0:17:45.10:0,45,459	0/0:22,0:22:51.11:0,51,520	0/0:21,0:21:54.12:0,54,551	1/1:4,14:18:36.09:438,36,0	1/1:1,16:17:39.12:491,39,0	1/1:0,9:9:27.09:340,27,0	0/0:16,0:16:39.09:0,39,398	0/0:20,0:20:60.13:0,60,607	0/0:28,0:28:84.17:0,84,849	0/0:11,0:11:33.08:0,33,337
chr10	100770185	.	A	AC	5342.30	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-8.781;DP=666;FS=3.642;HRun=4;HaplotypeScore=67.7244;InbreedingCoeff=0.9992;MQ=84.19;MQ0=0;MQRankSum=-2.992;QD=37.10;ReadPosRankSum=1.680;VQSLOD=4.9656;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:69.22:926,69,0	1/1:1,11:12:36.12:491,36,0	0/0:17,0:17:36.09:0,36,403	0/0:29,0:29:71.61:0,72,750	0/0:40,0:40:99:0,102,1145	0/0:28,0:28:78.22:0,78,885	0/0:18,0:18:54.15:0,54,613	0/0:38,0:38:99:0,102,1149	0/0:26,0:26:78.22:0,78,884	0/0:24,0:24:72.21:0,72,817	0/0:27,0:27:81.22:0,81,909	1/1:2,17:19:42.14:574,42,0	0/0:26,0:26:75.21:0,75,851	1/1:0,22:22:60.20:821,60,0	1/1:0,13:13:39.13:534,39,0	0/0:18,0:18:51.14:0,51,579	0/0:19,0:19:54.13:0,54,600	0/0:19,0:19:51.14:0,51,577	0/0:17,0:17:45.10:0,45,488	0/0:35,0:35:99:0,102,1157	0/0:33,0:32:96.26:0,96,1079	1/1:0,19:19:54.18:735,54,0	1/1:2,20:22:63.21:852,63,0	1/1:2,11:13:30.10:410,30,0	0/0:30,0:30:81.23:0,81,919	0/0:25,0:25:72.21:0,72,817	0/0:46,0:46:99:0,138,1550	0/0:7,0:7:21.06:0,21,238
chr10	100770573	.	GA	G	4918.03	PASS	AB=0.779;AC=28;AF=0.500;AN=56;BaseQRankSum=12.986;DP=492;FS=7.645;HRun=9;HaplotypeScore=62.4847;InbreedingCoeff=0.8493;MQ=71.11;MQ0=1;MQRankSum=-3.670;QD=17.44;ReadPosRankSum=-0.768;VQSLOD=4.4296;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:11:16.30:48,16,0	0/0:5,0:5:15.03:0,15,163	0/0:15,0:16:19.35:0,19,195	0/1:9,0:9:12.04:12,0,81	0/0:33,0:33:99:0,99,1105	0/0:18,0:18:51.15:0,51,589	0/0:11,0:11:33.10:0,33,381	1/1:6,30:36:89.99:807,90,0	0/0:9,0:9:24.07:0,24,277	0/0:21,0:21:57.16:0,57,651	0/0:18,0:18:45.13:0,45,519	1/1:1,0:14:24.44:72,24,0	0/0:11,0:11:30.08:0,30,336	1/1:1,0:17:28.52:84,29,0	0/0:11,0:11:33.10:0,33,381	1/1:3,19:22:54.03:494,54,0	0/0:16,0:16:39.10:0,39,441	0/0:23,0:23:48.10:0,48,526	1/1:4,13:17:42.01:384,42,0	1/1:0,31:31:90.04:824,90,0	1/1:1,6:7:12:110,12,0	1/1:1,0:9:16.30:48,16,0	1/1:3,0:14:20.37:60,20,0	1/1:0,0:13:24.44:72,24,0	0/0:18,0:18:54.14:0,54,611	0/1:6,23:29:25.85:544,0,26	1/1:0,29:29:87.05:796,87,0	1/1:1,22:23:53.24:564,53,0
chr10	100771241	.	TCACACACACACACACA	T	407.69	PASS	AC=6;AF=0.143;AN=42;BaseQRankSum=3.669;DP=490;FS=24.094;HRun=0;HaplotypeScore=196.4201;InbreedingCoeff=0.4588;MQ=70.85;MQ0=15;MQRankSum=-2.388;QD=11.32;ReadPosRankSum=-0.465;VQSLOD=0.8193;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:12.04:0,12,200	./.	./.	./.	0/0:11,0:11:9.03:0,9,459	0/0:16,0:15:18.06:0,18,850	0/0:32,0:32:12.04:0,12,453	./.	0/0:15,0:15:9.03:0,9,228	0/0:17,0:16:21.53:0,22,1107	0/0:5,0:5:3.01:0,3,195	0/0:22,0:22:11.51:0,12,124	./.	0/0:9,0:9:9:0,9,88	1/1:12,1:13:3.01:123,3,0	1/1:11,2:13:6.02:259,6,0	0/0:20,0:19:17.27:0,17,755	0/0:23,0:23:21.64:0,22,797	./.	./.	0/0:28,0:27:0.61:0,1,39	0/0:23,0:20:9.03:0,9,122	0/0:19,0:18:3.01:0,3,48	0/0:21,0:19:12.02:0,12,164	0/0:6,0:6:1.64:0,2,32	0/0:23,0:23:5.40:0,5,15	0/0:13,0:13:0.89:0,1,2	1/1:9,1:9:3.01:129,3,0
chr10	100771387	.	G	GTTA	19034.68	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=16.070;DP=572;FS=0.000;HRun=0;HaplotypeScore=127.7839;InbreedingCoeff=0.9655;MQ=82.91;MQ0=0;MQRankSum=-10.502;QD=62.41;ReadPosRankSum=4.587;VQSLOD=6.3856;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:24:63.09:1350,63,0	0/0:15,0:15:42.12:0,42,749	0/0:17,0:17:47.98:0,48,713	0/0:24,0:24:57:0,57,832	0/0:18,0:18:54.06:0,54,756	0/0:18,0:18:51.17:0,51,950	0/0:22,0:22:63.20:0,63,1143	1/1:5,9:14:39.13:884,39,0	0/0:17,0:17:51.12:0,51,813	0/0:18,0:18:48.12:0,48,700	0/0:15,0:15:45.07:0,45,645	1/1:3,19:23:66.23:1594,66,0	0/0:11,0:11:33.11:0,33,615	1/1:3,18:21:60.21:1434,60,0	0/0:29,0:29:84.25:0,84,1495	1/1:2,17:19:57.20:1368,57,0	0/0:34,0:34:99:0,99,1806	0/0:15,0:15:39.13:0,39,727	1/1:4,11:16:42.14:1031,42,0	1/1:9,18:30:77.04:1793,77,0	1/1:4,15:20:51.18:1232,51,0	1/1:3,21:25:63.22:1523,63,0	1/1:2,24:27:75.19:1729,75,0	1/1:2,26:28:63.17:1492,63,0	0/0:14,0:14:42.09:0,42,653	1/1:5,23:27:1.36:1780,1,0	1/1:2,22:24:63.22:1530,63,0	1/1:0,4:4:12.04:294,12,0
chr10	100772812	.	TCTAA	T	1111.38	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.164;DP=627;FS=0.820;HRun=0;HaplotypeScore=98.7910;InbreedingCoeff=0.9970;MQ=76.72;MQ0=0;MQRankSum=-1.425;QD=39.69;ReadPosRankSum=1.410;VQSLOD=3.4854;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.24:0,69,1802	1/1:0,13:13:30.10:569,30,0	0/0:14,0:14:42.14:0,42,1084	0/0:14,0:13:27.53:0,28,569	0/0:43,0:43:99:0,120,3087	0/0:29,0:29:81.26:0,81,2057	0/0:15,0:15:42.14:0,42,1079	0/0:37,0:37:99:0,105,2583	0/0:15,0:15:45.15:0,45,1178	0/0:34,0:34:99:0,99,2522	0/0:27,0:27:78.27:0,78,2075	0/0:24,0:24:66.23:0,66,1774	0/0:32,0:32:93.32:0,93,2502	0/0:19,0:19:57.20:0,57,1437	1/1:0,15:15:36.12:664,36,0	0/0:20,0:20:57.18:0,57,1451	0/0:16,0:16:45.15:0,45,1153	0/0:15,0:15:42.14:0,42,1131	0/0:16,0:16:45.15:0,45,1163	0/0:30,0:30:84.29:0,84,2237	0/0:16,0:16:48.16:0,48,1263	0/0:12,0:12:36.11:0,36,885	0/0:29,0:29:84.28:0,84,2174	0/0:7,0:7:21.07:0,21,567	0/0:22,0:22:60.21:0,60,1556	0/0:42,0:42:99:0,126,3232	0/0:31,0:30:93.30:0,93,2360	0/0:15,0:15:45.15:0,45,1214
chr10	100773385	.	G	GT	1973.90	PASS	AB=0.733;AC=12;AF=0.214;AN=56;BaseQRankSum=-3.579;DP=568;FS=1.935;HRun=13;HaplotypeScore=78.1395;InbreedingCoeff=0.7743;MQ=78.14;MQ0=0;MQRankSum=1.733;QD=14.20;ReadPosRankSum=0.411;VQSLOD=4.2809;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:3,18:22:2.23:234,0,2	0/0:8,0:8:14.82:0,15,100	0/0:16,0:11:20.56:0,21,130	0/0:26,0:23:1.95:0,2,43	0/0:25,0:26:60.93:0,61,401	0/0:20,1:23:19.12:0,19,332	0/0:16,0:16:35.64:0,36,243	0/0:31,0:32:67.24:0,67,448	0/0:26,0:26:68.38:0,68,470	0/0:23,0:25:61.45:0,61,413	0/0:23,1:24:34.37:0,34,372	1/1:3,18:23:26.42:369,26,0	0/0:18,0:20:36.76:0,37,298	1/1:1,16:18:47.81:431,48,0	0/0:17,1:19:15.69:0,16,239	0/0:13,0:13:32.69:0,33,225	0/0:19,0:22:56.61:0,57,363	0/1:12,1:13:4.09:4,0,119	0/0:25,0:27:11.50:0,11,311	0/0:18,0:19:37.63:0,38,250	0/0:8,0:8:17.85:0,18,123	1/1:3,12:17:18.14:287,18,0	1/1:7,20:29:56.66:491,57,0	1/1:4,13:17:36.04:334,36,0	0/0:18,0:18:38.62:0,39,265	0/0:20,0:21:55.58:0,56,376	0/0:30,0:30:40.52:0,41,422	0/0:7,0:7:2.94:0,3,20
chr10	100774805	.	GTA	G	1467.02	PASS	AB=0.964;AC=18;AF=0.321;AN=56;BaseQRankSum=6.200;DP=937;FS=64.676;HRun=0;HaplotypeScore=201.9479;InbreedingCoeff=-0.3241;MQ=43.21;MQ0=14;MQRankSum=-3.698;QD=2.66;ReadPosRankSum=-2.161;VQSLOD=0.5333;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:28:4.43:0,4,105	0/1:8,0:8:13.97:14,0,18	0/1:18,0:6:0.39:0,0,105	0/0:25,0:10:19.96:0,20,320	0/0:31,1:30:27.23:0,27,545	0/0:32,0:32:37.75:0,38,1054	0/0:30,0:28:19.83:0,20,605	0/1:53,0:37:99:128,0,362	0/0:38,0:38:80.57:0,81,1497	0/0:54,0:49:93.91:0,94,1737	0/0:23,0:21:20.24:0,20,310	0/1:40,1:39:70.97:102,0,71	0/0:40,1:40:34.33:0,34,1293	0/1:37,0:35:19.12:19,0,194	0/1:38,3:33:84.23:84,0,168	0/1:28,6:32:98.65:139,0,99	0/0:45,0:45:93.89:0,94,1713	0/0:33,0:32:24.01:0,24,1041	0/1:23,0:17:99:138,0,129	0/1:19,2:21:33.93:34,0,39	0/1:70,3:66:99:103,0,316	0/1:30,0:30:29.87:30,0,113	0/1:23,0:22:22.06:22,0,67	0/1:33,2:34:80.93:106,0,81	0/1:42,0:41:2.02:2,0,217	0/1:34,3:36:99:334,0,352	0/1:23,2:25:99:207,0,114	1/1:10,1:11:2.89:160,3,0
chr10	100774875	.	ATGTG	A	10143.68	PASS	AB=0.751;AC=29;AF=0.518;AN=56;BaseQRankSum=6.821;DP=1174;FS=14.592;HRun=0;HaplotypeScore=190.0202;InbreedingCoeff=0.7430;MQ=40.22;MQ0=44;MQRankSum=0.408;QD=17.19;ReadPosRankSum=5.233;VQSLOD=3.2558;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,23:31:26.99:496,27,0	1/1:7,9:14:5.70:110,6,0	0/0:47,0:9:20.82:0,21,316	0/0:57,0:11:30.09:0,30,645	0/0:47,0:46:39.12:0,39,943	0/0:29,0:26:45.15:0,45,1180	0/0:39,0:37:66.11:0,66,1663	0/1:49,7:34:99:615,0,106	0/0:58,1:57:99:0,99,2327	0/0:75,0:68:99:0,117,3500	0/0:37,0:34:30.10:0,30,739	1/1:3,39:42:30.10:545,30,0	0/0:51,0:50:99:0,107,2651	1/1:7,19:26:38.88:709,39,0	1/1:17,27:37:72.72:1290,73,0	1/1:8,31:38:57.20:1041,57,0	0/0:46,0:45:99:0,115,2748	0/0:40,0:40:99:0,109,2508	1/1:20,16:21:47.81:752,48,0	1/1:24,14:37:24.07:402,24,0	1/1:57,29:80:73.49:1316,73,0	1/1:16,21:37:3.01:55,3,0	1/1:11,9:20:15.05:276,15,0	1/1:7,31:38:29.88:531,30,0	0/0:55,0:56:39.12:0,39,900	0/1:31,24:44:99:1335,0,175	1/1:5,16:21:25.15:568,25,0	0/1:2,2:4:52.36:101,0,52
chr10	100774929	.	GTA	G	263.32	PASS	AB=0.978;AC=9;AF=0.161;AN=56;BaseQRankSum=6.496;DP=1410;FS=1.911;HRun=0;HaplotypeScore=251.0601;InbreedingCoeff=0.0191;MQ=36.26;MQ0=72;MQRankSum=-2.161;QD=0.76;ReadPosRankSum=-7.176;VQSLOD=0.2730;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:34:48.31:48,0,386	1/1:23,1:21:0.34:1,0,0	0/0:26,0:4:12:0,12,179	0/0:33,0:6:18:0,18,239	0/0:47,2:49:35.92:0,36,580	0/0:41,0:34:51.06:0,51,850	0/0:72,0:57:67.04:0,67,1062	0/0:70,0:37:64.93:0,65,781	0/0:71,0:68:75.61:0,76,1471	0/0:106,4:93:77.49:0,77,3500	0/0:49,3:50:39.13:0,39,748	0/1:38,4:38:33.30:33,0,174	0/0:64,0:59:94.53:0,95,1748	0/0:19,1:16:2.99:0,3,24	0/0:48,2:40:34.32:0,34,501	0/0:36,0:34:13.99:0,14,299	0/0:54,3:55:35.26:0,35,2058	0/0:38,0:38:66.08:0,66,1519	0/0:25,0:15:29.97:0,30,288	0/0:62,1:62:0.20:0,0,165	0/1:115,0:96:12.13:12,0,555	0/1:52,1:50:48.84:80,0,49	0/1:37,2:36:99:111,0,111	0/0:42,0:40:15.57:0,16,291	0/0:79,2:78:26.68:0,27,503	0/0:63,0:55:49.84:0,50,991	0/1:19,0:19:13.23:13,0,220	0/1:15,0:14:0.05:91,0,0
chr10	100774931	.	A	ATG	4290.29	PASS	AB=0.898;AC=19;AF=0.339;AN=56;BaseQRankSum=-0.154;DP=1430;FS=7.498;HRun=0;HaplotypeScore=249.8981;InbreedingCoeff=0.5483;MQ=36.15;MQ0=79;MQRankSum=-2.458;QD=7.80;ReadPosRankSum=-1.763;VQSLOD=3.3107;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:34:12.14:0,12,321	1/1:25,0:23:0.45:1,0,0	0/0:25,0:4:9.03:0,9,102	0/0:34,0:6:9.03:0,9,110	0/0:46,0:48:30.08:0,30,367	0/0:41,0:34:42.08:0,42,517	0/0:74,0:58:52.18:0,52,629	1/1:51,20:39:58.07:876,58,0	0/0:72,0:70:84.45:0,84,975	0/0:108,0:93:99:0,207,2443	0/0:53,0:51:39.01:0,39,483	0/0:43,0:39:17.14:0,17,174	0/0:64,0:60:84.03:0,84,1192	0/1:19,0:15:0:0,0,0	0/0:52,0:41:13.27:0,13,140	1/1:18,18:34:14.97:233,15,0	0/0:60,0:58:99:0,117,1391	0/0:38,0:38:76.40:0,76,997	1/1:18,6:14:21.07:305,21,0	1/1:48,10:61:5.10:257,5,0	1/1:73,43:96:69.21:1102,69,0	0/1:53,0:52:19.26:19,0,29	0/1:40,0:37:19.66:20,0,97	0/0:42,0:41:20.79:0,21,267	0/0:74,0:75:23.72:0,24,287	0/1:47,19:57:99:917,0,128	0/1:11,8:20:57.70:371,0,58	1/1:12,2:13:5.39:189,5,0
chr10	100774983	.	GTA	G	1440.81	PASS	AB=0.990;AC=15;AF=0.268;AN=56;BaseQRankSum=9.394;DP=1536;FS=3.258;HRun=0;HaplotypeScore=435.0506;InbreedingCoeff=0.1448;MQ=36.40;MQ0=87;MQRankSum=-2.846;QD=2.45;ReadPosRankSum=1.345;VQSLOD=0.3966;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:45:41.83:0,42,632	0/0:25,1:22:9.08:0,9,72	0/1:14,0:3:10.04:14,0,10	0/1:30,1:4:11.88:41,0,12	0/0:44,0:43:44.98:0,45,733	0/0:34,0:30:27.91:0,28,630	0/0:65,0:44:53.77:0,54,916	0/1:54,1:19:64.13:64,0,144	0/0:83,0:82:95.15:0,95,1587	0/0:121,0:104:10.07:0,10,2958	0/0:53,0:50:28.11:0,28,652	0/0:56,0:55:49.40:0,49,816	0/0:79,0:71:99:0,123,2011	0/0:55,0:51:31.52:0,32,475	0/1:77,1:67:43.20:43,0,126	1/1:47,0:42:16.19:134,16,0	0/0:57,0:56:99:0,115,2014	0/1:33,1:34:30.95:31,0,875	0/1:26,0:11:21.71:44,0,22	0/1:73,0:71:22.70:84,0,23	1/1:115,0:97:51.27:502,51,0	0/0:62,0:60:26.98:0,27,410	0/0:46,0:41:21.02:0,21,303	0/0:51,0:51:60.06:0,60,885	0/0:63,0:61:24.24:0,24,483	1/1:65,0:47:2.90:406,3,0	0/1:31,0:30:43.88:98,0,44	0/1:19,0:17:43.56:148,0,44
chr10	100774985	.	ATG	A	3750.97	PASS	AB=0.797;AC=15;AF=0.268;AN=56;BaseQRankSum=5.656;DP=1546;FS=2.914;HRun=0;HaplotypeScore=435.8955;InbreedingCoeff=0.5255;MQ=36.44;MQ0=85;MQRankSum=-3.438;QD=7.53;ReadPosRankSum=1.894;VQSLOD=2.5248;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:46:32.79:0,33,517	0/0:23,0:21:14.66:0,15,95	0/0:15,0:3:6.12:0,6,54	0/1:28,1:4:12.88:13,0,78	0/0:45,0:44:42.14:0,42,686	0/0:34,1:31:0.09:0,0,526	0/0:68,0:46:53.98:0,54,876	1/1:52,5:18:18.01:205,18,0	0/0:82,0:80:93.10:0,93,1449	0/0:122,0:106:77.91:0,78,2857	0/0:51,0:48:35.33:0,35,556	0/0:58,0:57:33.49:0,33,757	0/0:80,0:72:99:0,114,1803	0/0:57,0:53:35.88:0,36,542	0/0:52,0:67:38.72:0,39,190	1/1:27,24:46:22.28:310,22,0	0/0:56,1:56:89.54:0,90,1657	0/1:35,0:35:9.20:9,0,780	1/1:24,2:11:12:137,12,0	1/1:45,29:72:7.34:291,7,0	1/1:66,45:94:99:1422,111,0	0/0:62,1:61:27.09:0,27,433	0/0:49,0:44:15.05:0,15,243	0/0:51,0:51:48.04:0,48,762	0/0:61,0:59:27.09:0,27,456	0/1:36,28:46:0.80:850,0,1	0/1:19,13:31:57.82:147,0,58	0/1:7,12:17:33.61:366,0,34
chr10	100774995	.	GTA	G	1274.98	PASS	AB=0.975;AC=12;AF=0.214;AN=56;BaseQRankSum=11.131;DP=1567;FS=4.531;HRun=0;HaplotypeScore=468.3890;InbreedingCoeff=-0.0475;MQ=36.52;MQ0=79;MQRankSum=-4.697;QD=2.01;ReadPosRankSum=3.061;VQSLOD=0.5335;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:47:38.89:0,39,671	0/0:24,2:22:14.19:0,14,99	0/0:27,1:7:11.10:0,11,128	0/1:37,0:9:7.05:7,0,89	0/0:41,4:44:45.10:0,45,764	0/0:31,1:29:21.91:0,22,621	0/0:60,0:44:62.71:0,63,962	0/1:52,0:19:44.26:44,0,171	0/0:77,2:77:96.80:0,97,1652	0/1:116,7:110:99:118,0,2957	0/0:40,4:41:41.83:0,42,637	0/0:63,1:63:54.63:0,55,953	0/0:75,2:70:97.17:0,97,2105	0/0:58,1:55:44.57:0,45,664	0/0:89,0:78:65.95:0,66,408	0/1:59,0:55:49.13:117,0,49	0/0:50,0:49:75.13:0,75,1757	0/1:37,0:37:4.07:4,0,977	0/1:27,0:12:21.79:42,0,22	0/1:67,5:70:55.50:78,0,55	1/1:108,2:93:19.93:464,20,0	0/0:65,4:67:36.04:0,36,577	0/0:47,3:44:26.97:0,27,342	0/0:46,0:46:51.13:0,51,911	0/0:60,1:59:25.29:0,25,500	0/1:61,5:48:84.14:331,0,84	0/1:31,2:32:62.41:62,0,161	0/1:18,0:16:37.15:161,0,37
chr10	100775053	.	G	GTA	73.65	PASS	AB=0.960;AC=7;AF=0.125;AN=56;BaseQRankSum=5.696;DP=1235;FS=62.214;HRun=0;HaplotypeScore=357.9199;InbreedingCoeff=0.0382;MQ=35.62;MQ0=55;MQRankSum=-3.450;QD=0.27;ReadPosRankSum=-1.566;VQSLOD=-0.4570;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:11.57:0,12,183	0/0:17,0:17:2.72:0,3,48	0/0:45,1:6:11.29:0,11,182	0/0:49,0:5:10.63:0,11,181	0/0:49,0:46:29.68:0,30,436	0/0:19,1:21:11.80:0,12,183	0/0:35,2:32:36.11:0,36,528	0/1:95,2:58:25.56:26,0,1895	0/0:63,0:61:53.19:0,53,753	0/0:103,0:95:99:0,222,2868	0/0:33,0:30:20.70:0,21,320	0/0:43,1:44:23.76:0,24,544	0/0:52,0:51:66.12:0,66,1004	0/0:37,0:40:24.79:0,25,387	0/0:55,2:55:41.27:0,41,637	0/1:45,1:43:35.92:36,0,485	0/0:13,0:13:17.05:0,17,226	0/0:23,0:23:10.38:0,10,521	0/1:44,2:20:26.54:27,0,506	0/0:54,2:56:25.77:0,26,379	0/0:73,0:60:53.31:0,53,778	0/0:49,3:50:17.52:0,18,275	0/0:42,5:42:13.93:0,14,228	0/0:21,1:22:17.68:0,18,273	0/0:31,0:32:5.69:0,6,91	0/1:50,2:45:4.45:4,0,1219	0/1:20,2:23:89.76:90,0,264	1/1:3,0:3:2.50:9,2,0
chr10	100775063	.	A	ATG	404.98	PASS	AB=0.994;AC=6;AF=0.107;AN=56;BaseQRankSum=7.139;DP=1007;FS=59.847;HRun=0;HaplotypeScore=283.2960;InbreedingCoeff=-0.0658;MQ=33.95;MQ0=47;MQRankSum=-6.212;QD=1.61;ReadPosRankSum=0.123;VQSLOD=0.7220;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:5.60:0,6,76	0/0:14,0:14:2.84:0,3,38	0/0:36,0:4:6.02:0,6,76	0/0:39,0:4:3.01:0,3,37	0/0:38,1:37:5.67:0,6,76	0/0:15,0:15:5.92:0,6,62	0/0:31,0:26:21.05:0,21,252	0/1:79,0:42:39.82:40,0,466	0/0:54,0:50:13.40:0,13,175	0/1:84,2:78:99:397,0,1019	0/0:26,1:24:11.29:0,11,152	0/0:38,0:38:20.51:0,21,222	0/1:46,0:44:52.75:53,0,232	0/0:33,0:33:19.90:0,20,200	0/0:50,0:48:29.22:0,29,376	0/0:38,0:36:8.90:0,9,224	0/0:11,0:11:11.76:0,12,103	0/0:18,0:18:29.78:0,30,347	0/1:37,0:16:21.10:21,0,192	0/0:42,0:42:11.49:0,11,152	0/0:61,0:50:23.29:0,23,303	0/0:43,0:42:14.50:0,14,176	0/0:36,0:34:14.04:0,14,176	0/0:18,0:18:14.70:0,15,190	0/0:30,1:30:2.71:0,3,38	0/0:37,0:31:3:0,3,453	0/0:19,0:19:0.84:0,1,151	1/1:3,0:3:0.47:1,0,0
chr10	100775065	.	G	GTC	365.31	PASS	AB=0.946;AC=6;AF=0.107;AN=56;BaseQRankSum=6.596;DP=975;FS=44.678;HRun=0;HaplotypeScore=278.2379;InbreedingCoeff=0.0507;MQ=33.91;MQ0=42;MQRankSum=-5.271;QD=1.51;ReadPosRankSum=-0.214;VQSLOD=1.4137;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:23:11.58:0,12,138	0/0:14,0:14:2.39:0,2,45	0/0:35,0:4:11.96:0,12,134	0/0:37,0:4:5.31:0,5,86	0/0:33,2:36:14.66:0,15,164	0/0:15,0:15:5.93:0,6,90	0/0:28,2:25:30.05:0,30,390	0/1:72,3:40:23.95:24,0,857	0/0:49,0:45:20.10:0,20,268	0/1:74,6:74:99:344,0,1475	0/0:25,2:24:20.64:0,21,254	0/0:37,0:37:32.30:0,32,369	0/1:41,2:42:78.52:79,0,441	0/0:30,0:30:15.48:0,15,252	0/0:48,2:48:32.41:0,32,481	0/0:38,0:36:30.26:0,30,375	0/0:10,1:11:1.15:0,1,136	0/0:18,0:18:35.62:0,36,452	0/1:37,1:17:15.88:16,0,319	0/0:41,0:41:11.49:0,11,183	0/0:56,0:49:37.34:0,37,481	0/0:43,0:42:14.98:0,15,228	0/0:36,0:34:14.06:0,14,227	0/0:18,0:18:14.70:0,15,229	0/0:26,2:30:5.66:0,6,68	0/0:36,0:31:46.92:0,47,776	0/0:17,0:17:20.23:0,20,263	1/1:3,0:3:2.97:20,3,0
chr10	100775092	.	T	TA	305.34	PASS	AB=1.000;AC=25;AF=0.893;AN=28;BaseQRankSum=-1.735;DP=109;FS=0.000;HRun=0;HaplotypeScore=38.8086;InbreedingCoeff=0.1537;MQ=32.30;MQ0=7;MQRankSum=0.385;QD=4.43;ReadPosRankSum=-1.735;VQSLOD=2.2480;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/1:3,0:3:0:0,0,0	./.	./.	./.	./.	./.	1/1:6,0:1:3:25,3,0	1/1:4,0:4:2.99:24,3,0	1/1:18,1:18:6.71:58,7,0	1/1:4,0:4:3:25,3,0	1/1:4,0:4:3:25,3,0	0/0:6,0:6:0.47:0,0,1	1/1:4,0:4:3:25,3,0	./.	1/1:3,1:4:0.47:1,0,0	./.	1/1:2,2:4:8.69:53,9,0	./.	./.	1/1:4,0:4:2.99:24,3,0	1/1:5,0:5:3:25,3,0	1/1:4,0:4:8.99:75,9,0	./.	./.	1/1:4,0:3:2.96:20,3,0	./.	./.
chr10	100775153	.	ATG	A	351.15	PASS	AB=0.904;AC=13;AF=0.271;AN=48;BaseQRankSum=2.706;DP=674;FS=6.767;HRun=0;HaplotypeScore=180.4859;InbreedingCoeff=0.1174;MQ=28.86;MQ0=21;MQRankSum=-3.546;QD=1.16;ReadPosRankSum=1.908;VQSLOD=1.7741;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,1:23:0.04:0,0,0	./.	./.	./.	0/1:28,1:27:0:0,0,0	0/0:12,2:12:6.02:0,6,94	0/0:30,0:25:11.46:0,11,152	0/0:23,0:15:16.55:0,17,131	0/0:30,8:36:20.74:0,21,306	0/1:45,9:52:99:185,0,793	0/0:23,2:28:5.88:0,6,71	0/0:20,7:28:8:0,8,40	0/0:23,7:29:16.46:0,16,234	0/1:17,5:25:9.77:17,0,10	0/1:32,9:39:0.13:0,0,0	0/0:18,8:28:1.82:0,2,5	0/0:24,1:23:9:0,9,185	0/1:18,0:18:26.44:26,0,302	0/1:18,3:10:65.70:66,0,87	0/0:35,0:35:2.03:0,2,5	./.	0/0:20,0:19:0:0,0,0	0/1:23,2:25:0.02:0,0,0	0/1:14,4:18:0:0,0,0	0/0:28,1:27:8.77:0,9,149	0/1:24,4:22:99:124,0,154	0/1:8,0:7:6.34:6,0,51	1/1:4,0:4:9.53:42,10,0
chr10	100775155	.	G	GTGTA	505.38	PASS	AB=0.993;AC=19;AF=0.380;AN=50;BaseQRankSum=6.265;DP=706;FS=28.586;HRun=0;HaplotypeScore=204.5666;InbreedingCoeff=0.0983;MQ=28.77;MQ0=27;MQRankSum=-2.893;QD=1.24;ReadPosRankSum=0.422;VQSLOD=1.1285;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:24:1.93:0,2,6	0/0:14,0:12:0:0,0,0	./.	./.	0/0:30,0:27:0:0,0,0	0/0:15,0:13:9.01:0,9,116	0/0:34,0:29:9.21:0,9,160	0/0:26,0:17:24.07:0,24,134	0/0:38,0:36:20.33:0,20,273	0/1:58,0:53:99:186,0,695	0/0:30,0:30:1.50:0,2,68	1/1:30,1:30:4.93:20,5,0	0/0:30,0:29:5.83:0,6,234	1/1:23,1:25:5.85:29,6,0	0/1:41,2:41:0:1,0,0	1/1:30,1:29:0.40:1,0,0	0/1:26,0:24:20.70:21,0,158	0/1:18,0:18:99:108,0,275	0/1:25,0:10:38.10:38,0,96	1/1:36,0:36:0.87:2,1,0	0/1:28,0:20:0:0,0,0	./.	0/1:25,0:25:0.08:1,0,0	0/1:18,0:18:0:0,0,0	0/0:31,0:27:8.97:0,9,144	0/1:30,0:22:57.44:111,0,57	0/1:9,0:8:5.85:76,0,6	0/1:4,0:4:3.70:33,0,4
chr10	100775159	.	G	GTA	52.15	PASS	AB=0.985;AC=14;AF=0.280;AN=50;BaseQRankSum=3.998;DP=763;FS=8.510;HRun=0;HaplotypeScore=214.0199;InbreedingCoeff=0.1784;MQ=28.88;MQ0=33;MQRankSum=-3.903;QD=0.15;ReadPosRankSum=-1.033;VQSLOD=1.1260;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:28:4.86:5,0,7	./.	./.	./.	0/0:34,0:30:5.88:0,6,50	0/0:20,0:18:15:0,15,164	0/0:38,0:32:9.16:0,9,139	0/1:31,0:20:28.65:29,0,160	0/0:38,3:39:20.25:0,20,307	0/0:64,0:58:3.71:0,4,880	0/0:30,0:30:6.48:0,6,72	0/1:29,0:30:6.80:7,0,12	0/0:30,0:29:18.71:0,19,252	1/1:25,0:25:6.04:39,6,0	0/1:46,0:42:0.04:0,0,0	0/0:32,0:30:0.15:0,0,1	0/1:24,0:24:14.39:14,0,195	0/0:19,0:19:8.48:0,8,374	0/0:30,0:13:5.66:0,6,111	1/1:39,0:38:0.89:2,1,0	0/0:30,0:20:0.36:0,0,1	0/1:24,0:21:0:0,0,0	0/1:26,0:26:0.02:0,0,0	0/1:18,1:19:0.15:0,0,0	0/0:31,0:27:9.50:0,10,138	0/1:35,0:27:48.97:49,0,196	0/1:9,0:8:0.53:20,0,1	0/0:6,0:6:2.98:0,3,41
chr10	100775161	.	G	GTC	103.07	PASS	AB=0.888;AC=15;AF=0.300;AN=50;BaseQRankSum=4.344;DP=783;FS=15.773;HRun=0;HaplotypeScore=217.6867;InbreedingCoeff=0.1934;MQ=28.89;MQ0=36;MQRankSum=-3.117;QD=0.29;ReadPosRankSum=1.845;VQSLOD=1.0674;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,3:29:0.18:0,0,0	./.	./.	./.	0/0:32,2:30:5.88:0,6,50	0/0:20,0:18:15:0,15,163	0/0:39,0:33:9.47:0,9,141	0/0:35,0:21:45.67:0,46,402	0/0:39,0:39:23.76:0,24,315	0/0:65,0:58:9.06:0,9,794	0/0:31,0:31:9.47:0,9,97	1/1:28,1:30:6.51:32,7,0	0/0:28,0:29:18.38:0,18,224	1/1:26,0:26:2.39:11,2,0	0/1:37,7:42:0.04:0,0,0	0/0:29,3:30:3.86:0,4,20	0/1:25,0:25:17.83:18,0,204	0/1:16,1:19:13.72:14,0,336	0/1:33,1:17:15.91:16,0,148	1/1:38,1:39:0.89:2,1,0	0/0:27,2:20:0.36:0,0,1	0/1:23,0:21:0:0,0,0	0/1:25,3:28:0.02:0,0,0	0/0:17,1:19:0:0,0,0	0/0:31,0:27:8.91:0,9,137	0/1:33,1:27:60.49:60,0,192	0/1:6,3:8:20.72:70,0,21	0/0:6,0:6:8.34:0,8,58
chr10	100775163	.	GTC	G	542.35	PASS	AB=0.995;AC=13;AF=0.271;AN=48;BaseQRankSum=2.822;DP=794;FS=0.000;HRun=0;HaplotypeScore=211.7502;InbreedingCoeff=-0.0160;MQ=28.99;MQ0=36;MQRankSum=-6.607;QD=1.34;ReadPosRankSum=-2.034;VQSLOD=2.0472;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:29:0.04:0,0,1	./.	./.	./.	0/0:33,1:30:5.79:0,6,48	0/0:20,0:18:15.02:0,15,193	0/1:40,0:34:2.38:2,0,164	0/1:37,0:22:79.12:115,0,79	0/0:41,1:40:34.90:0,35,446	0/1:65,1:58:80.02:80,0,738	0/0:30,3:33:14.89:0,15,182	0/0:31,0:30:2.66:0,3,34	0/0:30,0:29:23.99:0,24,292	0/1:26,0:26:9.75:29,0,10	0/1:46,0:42:0.13:0,0,0	1/1:33,0:31:5.31:31,5,0	0/0:28,0:27:0.56:0,1,270	0/1:18,0:19:54.66:55,0,400	0/1:34,1:17:25.98:151,0,26	0/0:41,0:40:2.03:0,2,5	./.	0/0:24,0:21:0:0,0,0	0/1:28,0:28:0.02:0,0,0	0/0:19,0:19:2.74:0,3,12	0/0:32,0:28:12.21:0,12,194	0/1:36,0:27:99:168,0,133	0/0:9,0:8:10.73:0,11,37	0/1:6,0:6:5.50:30,0,5
chr10	100775165	.	CTG	C	330.23	PASS	AB=0.956;AC=12;AF=0.250;AN=48;BaseQRankSum=2.826;DP=824;FS=0.674;HRun=0;HaplotypeScore=218.5137;InbreedingCoeff=0.0765;MQ=29.34;MQ0=37;MQRankSum=-4.159;QD=0.87;ReadPosRankSum=-0.978;VQSLOD=2.6129;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,1:30:0.18:1,0,0	./.	./.	./.	0/0:35,0:31:5.82:0,6,93	0/0:22,0:20:21.05:0,21,315	0/0:41,0:35:0.72:0,1,165	0/1:40,0:24:69.21:69,0,144	0/0:45,0:43:38.95:0,39,544	0/1:68,1:60:10.65:11,0,970	0/0:30,3:33:14.93:0,15,244	0/0:31,0:30:7.92:0,8,33	0/0:36,0:35:36.89:0,37,417	0/1:25,1:26:10.78:11,0,24	0/1:47,0:43:0.13:0,0,0	1/1:33,0:31:5.42:31,5,0	0/0:31,0:29:22.14:0,22,343	0/1:18,1:19:18.26:18,0,420	0/1:38,0:17:4.49:136,0,4	0/0:41,0:40:2.03:0,2,5	./.	0/0:24,0:21:0:0,0,0	0/1:27,2:29:0.02:0,0,0	0/0:19,0:19:2.37:0,2,8	0/0:29,3:28:11.78:0,12,190	0/1:39,0:29:99:113,0,229	0/0:9,0:8:12.50:0,13,65	0/1:4,2:6:6.34:60,0,6
chr10	100775167	.	G	GTA	468.56	PASS	AB=0.969;AC=18;AF=0.360;AN=50;BaseQRankSum=5.088;DP=861;FS=1.285;HRun=0;HaplotypeScore=237.0928;InbreedingCoeff=0.0624;MQ=29.33;MQ0=38;MQRankSum=-3.421;QD=0.90;ReadPosRankSum=-0.079;VQSLOD=2.3156;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,3:34:0.36:0,0,1	./.	./.	./.	0/0:33,2:31:5.91:0,6,92	0/0:23,0:21:21.05:0,21,296	0/1:41,0:35:2.68:3,0,146	0/1:43,0:25:99:148,0,242	0/0:42,4:44:32.60:0,33,500	0/1:74,0:65:1.94:2,0,947	0/0:34,0:34:15.52:0,16,229	0/1:31,1:32:4.70:5,0,5	0/0:34,2:35:36.17:0,36,414	0/1:28,0:28:7.67:18,0,8	0/1:41,7:44:0.04:0,0,0	1/1:30,3:31:5.46:35,5,0	0/0:30,1:29:0.79:0,1,285	0/1:19,1:20:18.92:19,0,441	0/1:40,1:18:19.79:128,0,20	1/1:42,1:43:0.89:2,1,0	0/0:30,2:21:0.36:0,0,1	0/1:29,0:26:0:0,0,0	0/1:26,3:29:0.02:0,0,0	0/0:18,2:20:2.80:0,3,13	0/0:32,0:28:12.51:0,13,176	0/1:39,1:30:93.36:93,0,146	1/1:8,3:10:8.82:127,9,0	0/1:6,0:6:13.32:13,0,36
chr10	100775169	.	G	GTA	161.41	PASS	AB=0.989;AC=15;AF=0.300;AN=50;BaseQRankSum=5.964;DP=881;FS=18.174;HRun=0;HaplotypeScore=245.3164;InbreedingCoeff=0.0711;MQ=29.33;MQ0=41;MQRankSum=-3.840;QD=0.37;ReadPosRankSum=0.359;VQSLOD=0.6916;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:35:0.31:0,0,1	./.	./.	./.	0/0:35,0:31:5.91:0,6,92	0/0:23,0:21:21.05:0,21,294	0/0:42,0:36:13.82:0,14,177	0/1:47,0:26:55.30:55,0,276	0/0:47,1:46:4.88:0,5,490	0/1:74,1:66:22.05:22,0,983	0/0:33,1:34:18.52:0,19,254	0/1:33,0:32:4.20:4,0,5	0/0:36,0:35:36.12:0,36,415	1/1:29,0:29:3.37:15,3,0	0/1:49,2:47:0.04:0,0,0	0/0:31,2:31:5.89:0,6,32	0/0:31,0:29:1.75:0,2,292	0/1:20,0:20:7.18:7,0,445	0/1:43,0:19:13.38:13,0,138	0/0:43,1:43:0.26:0,0,1	0/0:33,0:21:0.36:0,0,1	0/1:28,1:26:0:0,0,0	0/1:29,0:29:0.02:0,0,0	1/1:20,0:20:2.22:7,2,0	0/0:32,0:28:12.51:0,13,176	0/1:41,1:32:92.81:93,0,160	0/1:12,0:11:3.30:57,0,3	0/1:6,0:6:4.72:5,0,77
chr10	100775171	.	G	GTGTA	1712.34	PASS	AB=0.958;AC=21;AF=0.438;AN=48;BaseQRankSum=6.614;DP=911;FS=33.354;HRun=0;HaplotypeScore=258.1059;InbreedingCoeff=0.0450;MQ=29.47;MQ0=44;MQRankSum=-5.359;QD=2.86;ReadPosRankSum=1.219;VQSLOD=1.2371;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:36:0.34:0,0,1	./.	./.	./.	0/0:38,0:34:9.02:0,9,138	0/0:25,0:23:24.05:0,24,370	0/0:44,0:38:12.91:0,13,201	0/1:52,0:30:99:114,0,125	0/0:49,0:47:37.76:0,38,626	0/1:75,0:67:99:542,0,1061	0/0:34,0:35:20.99:0,21,319	1/1:34,0:33:7.79:105,8,0	0/1:36,0:35:7.34:7,0,398	1/1:28,0:29:8.15:31,8,0	0/1:52,0:48:0:1,0,0	0/1:32,0:31:0.44:0,0,13	0/1:30,0:29:27.58:28,0,383	0/1:17,0:21:99:299,0,529	0/1:44,0:19:70.96:71,0,86	0/0:40,3:44:0.86:0,1,3	0/1:32,0:22:0:0,0,0	./.	0/1:26,3:29:0.08:0,0,0	1/1:20,0:21:1.55:4,2,0	0/0:33,0:29:11.97:0,12,208	0/1:40,3:34:99:495,0,145	1/1:12,0:11:5.02:112,5,0	0/1:6,0:6:36.69:37,0,52
chr10	100775173	.	G	GTC	94.71	PASS	AB=0.971;AC=12;AF=0.240;AN=50;BaseQRankSum=6.106;DP=935;FS=19.981;HRun=0;HaplotypeScore=258.2921;InbreedingCoeff=0.2342;MQ=29.45;MQ0=48;MQRankSum=-3.383;QD=0.31;ReadPosRankSum=3.651;VQSLOD=0.6740;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:41,1:38:0.18:1,0,0	./.	./.	./.	0/0:36,0:34:8.91:0,9,116	0/0:25,0:23:24.05:0,24,316	0/0:44,0:38:16.87:0,17,205	0/0:58,0:32:77.81:0,78,663	0/0:52,0:50:43.01:0,43,570	0/1:74,0:67:94.10:94,0,1069	0/0:34,1:36:21.52:0,22,279	0/1:35,2:36:9.47:25,0,9	0/0:36,0:35:35.79:0,36,398	1/1:26,3:29:6.01:35,6,0	0/0:53,0:49:2.37:0,2,13	0/0:33,0:31:5.53:0,6,35	0/0:31,0:29:22.32:0,22,355	0/1:21,0:21:42.58:43,0,491	0/0:45,0:19:17.96:0,18,242	0/0:44,1:44:2.86:0,3,11	0/0:34,0:22:0.36:0,0,1	0/1:30,1:28:0:0,0,0	0/1:28,1:29:0.02:0,0,0	1/1:22,0:22:0.74:2,1,0	0/0:35,0:31:11.87:0,12,175	0/0:45,0:35:1.28:0,1,369	0/1:12,0:11:6.01:6,0,65	0/0:6,0:6:10.81:0,11,109
chr10	100775177	.	ATG	A	769.73	PASS	AB=0.921;AC=13;AF=0.271;AN=48;BaseQRankSum=5.322;DP=986;FS=26.480;HRun=0;HaplotypeScore=261.8455;InbreedingCoeff=0.0017;MQ=29.56;MQ0=58;MQRankSum=-4.179;QD=1.70;ReadPosRankSum=1.408;VQSLOD=1.1769;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:45,0:40:0.16:1,0,0	./.	./.	./.	0/0:38,1:35:8.83:0,9,149	0/0:27,0:24:29.99:0,30,467	0/0:39,4:38:3.08:0,3,239	0/1:50,17:38:99:317,0,430	0/0:56,0:55:54.17:0,54,851	0/1:83,0:69:99:218,0,1097	0/0:37,0:37:20.95:0,21,350	1/1:38,2:39:7.19:39,7,0	0/0:37,1:37:28.56:0,29,537	0/1:29,1:30:18.32:18,0,21	0/0:54,0:50:2.86:0,3,35	0/0:33,0:32:5.61:0,6,29	0/0:34,0:32:36.99:0,37,571	0/1:23,0:23:40.53:41,0,571	0/1:43,3:19:62.17:62,0,228	0/0:46,1:47:3.67:0,4,39	./.	0/1:32,1:29:0:0,0,0	0/1:28,2:30:0.02:0,0,0	0/0:22,0:22:2.22:0,2,7	0/0:35,0:31:14.79:0,15,251	0/1:42,3:35:99:125,0,441	0/0:13,0:12:20.18:0,20,214	0/1:4,2:6:15.15:75,0,15
chr10	100775179	.	G	GTGTA	1805.36	PASS	AB=0.981;AC=17;AF=0.354;AN=48;BaseQRankSum=6.671;DP=1006;FS=23.238;HRun=0;HaplotypeScore=282.9508;InbreedingCoeff=0.0452;MQ=29.56;MQ0=57;MQRankSum=-5.331;QD=3.30;ReadPosRankSum=1.105;VQSLOD=1.1053;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:43,2:40:0.13:1,0,0	./.	./.	./.	0/0:39,0:35:9.03:0,9,171	0/0:27,0:24:30:0,30,517	0/0:44,0:38:16.06:0,16,284	0/1:73,0:41:99:380,0,478	0/0:58,0:56:51.10:0,51,937	0/1:87,0:71:99:869,0,1133	0/0:36,0:37:16.54:0,17,391	1/1:38,1:39:7.98:136,8,0	0/1:39,0:38:9.27:9,0,557	1/1:28,0:30:8.72:52,9,0	0/0:54,0:50:2.23:0,2,42	0/0:34,0:32:5.87:0,6,67	0/0:34,0:32:28.95:0,29,609	0/1:24,0:24:50.03:50,0,566	0/1:48,0:21:45.56:46,0,316	0/0:50,0:49:3.31:0,3,46	0/1:38,0:25:0:0,0,0	./.	0/1:26,5:31:0.08:0,0,0	1/1:22,0:22:3.01:35,3,0	0/0:35,0:31:14.98:0,15,274	0/1:49,0:38:99:267,0,424	0/1:13,0:12:49.53:50,0,127	0/1:7,0:7:49.85:50,0,74
chr10	100775181	.	G	GTATGTC	1845.21	PASS	AB=0.944;AC=20;AF=0.400;AN=50;BaseQRankSum=6.446;DP=1024;FS=51.164;HRun=0;HaplotypeScore=302.6432;InbreedingCoeff=-0.1344;MQ=29.79;MQ0=58;MQRankSum=-4.867;QD=2.95;ReadPosRankSum=2.410;VQSLOD=1.1404;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:40:3.68:0,4,38	./.	./.	./.	0/0:33,3:36:9.50:0,10,198	0/0:26,2:24:30.02:0,30,571	0/1:44,1:39:12.74:13,0,273	0/1:76,0:44:99:199,0,349	0/0:58,1:57:61.06:0,61,1002	0/1:78,5:71:99:880,0,1550	0/0:32,2:36:22.01:0,22,464	1/1:36,4:39:1.12:112,1,0	0/1:39,1:40:48.17:48,0,629	0/1:29,1:30:7.47:7,0,10	0/0:48,6:50:2.19:0,2,17	0/1:25,8:32:5.24:5,0,11	0/0:33,1:33:34.30:0,34,620	0/1:27,0:27:4.93:5,0,776	0/1:49,0:23:18.56:19,0,210	0/0:45,5:50:2.47:0,2,19	1/1:38,0:25:0.45:2,0,0	0/1:31,1:29:0:0,0,0	1/1:27,1:31:0.47:1,0,0	1/1:22,0:23:3.88:21,4,0	0/0:34,0:32:14.48:0,14,301	0/1:49,1:38:99:463,0,298	0/1:12,1:12:70.15:87,0,70	0/1:6,1:7:61.26:116,0,61
chr10	100775183	.	G	GTC	137.38	PASS	AB=0.987;AC=10;AF=0.200;AN=50;BaseQRankSum=7.190;DP=1049;FS=67.728;HRun=0;HaplotypeScore=284.9707;InbreedingCoeff=0.2835;MQ=29.85;MQ0=59;MQRankSum=-3.575;QD=0.51;ReadPosRankSum=4.409;VQSLOD=0.3956;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:41:1.73:0,2,5	./.	./.	./.	0/0:38,4:38:8.92:0,9,137	0/0:28,0:24:30.02:0,30,428	0/0:48,0:43:19.94:0,20,293	0/0:77,0:45:80.47:0,80,1024	0/0:61,0:59:45.80:0,46,804	0/1:88,5:75:99:169,0,1256	0/0:36,1:37:21.54:0,22,322	0/1:40,0:39:2.61:3,0,20	0/0:43,1:43:40.12:0,40,523	1/1:31,0:32:5.78:25,6,0	0/0:54,0:50:2.69:0,3,43	0/0:34,0:32:5.69:0,6,90	0/0:35,0:33:39.54:0,40,574	0/0:27,0:27:29.32:0,29,631	0/0:51,0:25:33.69:0,34,541	0/0:52,0:51:4.10:0,4,48	0/0:39,0:25:0.36:0,0,1	0/1:31,0:29:0:0,0,0	0/1:31,0:31:0.02:0,0,0	1/1:23,0:23:2.86:34,3,0	0/0:36,0:32:15.03:0,15,229	0/0:49,0:38:15.29:0,15,827	0/1:13,0:12:15.30:15,0,255	0/1:7,0:7:5.31:5,0,58
chr10	100775185	.	G	GTA	141.38	PASS	AB=0.969;AC=10;AF=0.200;AN=50;BaseQRankSum=7.442;DP=1062;FS=76.317;HRun=0;HaplotypeScore=289.2775;InbreedingCoeff=0.2436;MQ=30.03;MQ0=59;MQRankSum=-3.181;QD=0.45;ReadPosRankSum=4.653;VQSLOD=-0.6373;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,2:41:2.94:0,3,13	./.	./.	./.	0/0:41,2:39:8.92:0,9,137	0/0:29,0:25:33.03:0,33,453	0/0:48,0:43:21.23:0,21,312	0/0:78,0:46:47.24:0,47,950	0/0:63,0:61:57.39:0,57,822	0/1:93,1:76:85.22:85,0,1278	0/0:37,0:37:21.54:0,22,322	0/1:40,1:40:5.98:6,0,11	0/0:44,0:44:44.37:0,44,571	1/1:31,1:32:7.82:38,8,0	0/0:52,2:50:2.69:0,3,44	0/0:32,1:32:5.69:0,6,84	0/0:36,0:34:12.75:0,13,551	0/0:28,0:28:18.27:0,18,677	0/0:50,0:25:57.51:0,58,551	0/0:50,0:52:2.08:0,2,43	0/0:37,3:26:0.36:0,0,1	0/1:29,0:29:0:0,0,0	0/1:30,0:31:0.02:0,0,0	1/1:21,2:23:2.86:51,3,0	0/0:32,2:31:15.52:0,16,230	0/1:49,0:38:61.71:62,0,826	0/1:11,2:12:20.31:20,0,243	0/0:7,0:7:6.56:0,7,63
chr10	100775207	.	G	GTC	134.57	PASS	AB=0.964;AC=11;AF=0.204;AN=54;BaseQRankSum=7.296;DP=1186;FS=8.571;HRun=0;HaplotypeScore=301.2121;InbreedingCoeff=0.0280;MQ=34.81;MQ0=48;MQRankSum=-5.545;QD=0.36;ReadPosRankSum=-3.856;VQSLOD=0.6498;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:41:2.77:0,3,20	./.	0/0:23,0:6:17.35:0,17,171	0/0:26,0:11:11.59:0,12,151	0/0:46,4:46:23.95:0,24,345	0/0:34,0:28:36.12:0,36,549	0/0:61,0:55:36.34:0,36,495	0/1:57,0:36:46.11:46,0,487	0/0:69,3:70:86.55:0,87,1383	0/0:103,2:89:82.33:0,82,2089	0/0:37,1:38:24.55:0,25,368	0/0:42,3:44:8.55:0,9,58	0/0:44,3:46:63.15:0,63,886	0/1:35,3:38:10.67:11,0,16	0/0:52,5:53:1.48:0,1,5	0/0:40,1:39:6.16:0,6,77	0/1:43,1:42:6.57:7,0,766	0/0:37,0:37:8.52:0,9,1004	0/0:33,1:24:53.05:0,53,541	0/1:61,0:63:12.38:12,0,30	0/0:39,0:28:0.36:0,0,1	0/1:32,0:28:0:0,0,0	0/1:32,0:33:0.02:0,0,0	1/1:26,0:27:0.73:2,1,0	0/0:38,1:35:14.95:0,15,229	0/1:52,0:39:75.48:75,0,687	0/1:20,1:20:59.29:59,0,183	0/1:6,0:7:27.60:41,0,28
chr10	100775219	.	G	GTGTA	1346.18	PASS	AB=1.000;AC=23;AF=0.426;AN=54;BaseQRankSum=8.054;DP=1194;FS=5.661;HRun=0;HaplotypeScore=335.5504;InbreedingCoeff=0.3741;MQ=39.78;MQ0=35;MQRankSum=-5.107;QD=2.27;ReadPosRankSum=-7.013;VQSLOD=0.2629;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:48,0:44:3.29:50,3,0	./.	0/0:36,0:16:45.12:0,45,659	0/0:34,0:19:35.20:0,35,499	0/0:47,0:43:24.08:0,24,455	0/0:36,0:30:42.10:0,42,697	0/0:55,0:50:33.01:0,33,537	0/1:51,0:38:37.82:278,0,38	0/0:69,0:68:97.93:0,98,1751	0/0:97,0:83:99:0,107,1859	0/0:40,0:40:33.04:0,33,555	1/1:46,2:47:0.62:71,1,0	0/0:53,0:51:75.45:0,75,1251	1/1:40,3:43:18.66:205,19,0	0/1:58,0:54:1.65:123,0,2	1/1:40,0:39:2.47:84,2,0	0/0:45,0:43:41.56:0,42,1178	0/0:36,0:37:16.37:0,16,1240	0/1:27,0:21:56.91:122,0,57	0/1:63,0:63:0.75:91,0,1	1/1:40,0:31:3.01:49,3,0	1/1:34,0:31:5.99:50,6,0	1/1:32,1:34:2.92:25,3,0	1/1:29,0:29:3.48:49,3,0	0/0:39,0:37:15.03:0,15,252	0/1:46,0:36:99:228,0,125	0/1:23,0:22:47.96:64,0,48	0/1:8,0:8:2.14:29,0,2
chr10	100775646	.	T	TCTTCCTTCCTTC	6133.63	PASS	AB=0.714;AC=27;AF=0.519;AN=52;BaseQRankSum=2.595;DP=619;FS=3.210;HRun=0;HaplotypeScore=197.5009;InbreedingCoeff=0.8342;MQ=64.73;MQ0=3;MQRankSum=-7.299;QD=20.31;ReadPosRankSum=-4.176;VQSLOD=3.3069;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:20:56.33:228,0,56	0/0:2,0:8:12.04:0,12,321	./.	./.	0/0:34,0:34:63.19:0,63,1772	0/0:32,0:32:51.14:0,51,1443	0/0:27,0:27:33.07:0,33,784	1/1:25,0:25:18.49:222,18,0	0/0:24,0:24:39.10:0,39,990	0/0:19,0:19:36.10:0,36,894	0/0:21,0:22:38.97:0,39,975	1/1:6,6:15:15.05:870,15,0	0/0:24,0:24:36.11:0,36,1018	1/1:9,9:23:12.04:690,12,0	0/0:7,0:26:36.05:0,36,848	1/1:11,0:25:15.52:381,16,0	0/0:20,0:21:33.09:0,33,997	0/0:22,0:22:26.41:0,26,925	1/1:16,0:23:23.98:485,24,0	1/1:23,0:29:8.98:172,9,0	1/1:11,0:22:4.83:232,5,0	1/1:10,6:25:8.96:247,9,0	1/1:10,6:19:9.92:453,10,0	1/1:11,0:11:12.04:499,12,0	0/0:18,0:18:39.13:0,39,1257	1/1:17,0:30:35.78:646,36,0	1/1:8,0:27:36.12:927,36,0	1/1:7,0:8:3.01:84,3,0
chr10	100776188	.	TATTA	T	643.36	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.691;DP=442;FS=3.777;HRun=0;HaplotypeScore=69.4959;InbreedingCoeff=0.8346;MQ=72.41;MQ0=0;MQRankSum=-0.267;QD=26.81;ReadPosRankSum=0.658;VQSLOD=3.3492;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:27.07:0,27,646	1/1:2,4:6:5.93:108,6,0	0/0:6,0:6:6.02:0,6,147	0/0:8,0:8:14.54:0,15,277	0/0:21,0:21:60.21:0,60,1536	0/0:25,0:25:72.25:0,72,1853	0/0:7,0:7:18.06:0,18,468	0/0:32,0:32:87.30:0,87,2221	0/0:6,0:6:18.06:0,18,468	0/0:21,0:21:63.22:0,63,1620	0/0:25,0:25:72.25:0,72,1869	0/0:21,0:21:51.17:0,51,1325	0/0:14,0:14:42.14:0,42,1065	0/0:12,0:12:33.11:0,33,857	1/1:3,15:18:36.12:647,36,0	0/0:20,0:20:48.16:0,48,1222	0/0:10,0:10:27.09:0,27,655	0/0:19,0:19:51.18:0,51,1300	0/0:28,0:28:81.28:0,81,2073	0/0:23,0:23:69.22:0,69,1689	0/0:5,0:5:9.03:0,9,234	0/0:6,0:6:15.05:0,15,390	0/0:10,0:10:24.08:0,24,609	0/0:6,0:6:15.05:0,15,370	0/0:21,0:21:63.22:0,63,1637	0/0:16,0:16:42.14:0,42,1068	0/0:25,0:25:72.25:0,72,1803	0/0:21,0:21:57.20:0,57,1471
chr10	100776404	.	C	CCTT	1142.91	PASS	AB=0.607;AC=13;AF=0.232;AN=56;BaseQRankSum=5.459;DP=322;FS=2.458;HRun=0;HaplotypeScore=58.2361;InbreedingCoeff=0.0995;MQ=72.14;MQ0=0;MQRankSum=0.545;QD=7.57;ReadPosRankSum=-2.148;VQSLOD=2.1345;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:12:26.54:0,27,169	0/1:4,0:6:33.57:34,0,74	0/0:10,0:8:1.81:0,2,115	0/0:8,0:7:13.38:0,13,129	0/0:12,0:13:29.46:0,29,402	0/0:9,0:9:24:0,24,373	0/0:9,0:9:27.07:0,27,429	0/1:15,0:26:99:173,0,298	0/0:12,0:13:9.26:0,9,453	0/0:12,0:15:45:0,45,655	0/0:9,0:9:27.06:0,27,401	0/0:3,0:10:14.83:0,15,115	0/0:6,0:6:11.93:0,12,179	0/0:4,0:18:35.63:0,36,255	0/1:1,0:14:7.04:36,0,7	1/1:8,0:10:17.52:156,18,0	0/0:8,0:9:27.08:0,27,415	0/0:14,0:14:41.97:0,42,511	0/1:7,0:18:99:210,0,106	0/1:2,0:14:9.47:193,0,9	1/1:1,0:7:6.39:43,6,0	0/0:2,0:2:2.98:0,3,54	0/1:2,0:7:6.03:6,0,128	0/0:1,0:5:10.24:0,10,96	0/0:9,0:8:24.04:0,24,377	0/1:2,1:15:70.04:209,0,70	0/1:5,0:20:91.76:130,0,92	0/1:1,0:13:4.37:110,0,4
chr10	100776623	.	C	CAT	101.88	PASS	AB=0.758;AC=4;AF=0.074;AN=54;BaseQRankSum=-3.820;DP=283;FS=0.000;HRun=0;HaplotypeScore=33.4675;InbreedingCoeff=0.2063;MQ=66.12;MQ0=2;MQRankSum=1.344;QD=4.85;ReadPosRankSum=-0.334;VQSLOD=1.7185;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:12.04:0,12,147	1/1:0,4:4:6.02:98,6,0	./.	0/0:7,0:3:2.28:0,2,34	0/0:10,0:10:27.06:0,27,311	0/0:21,0:21:54.12:0,54,626	0/0:3,0:3:9.03:0,9,111	0/0:47,0:47:95.91:0,96,1107	0/0:5,0:5:9.03:0,9,110	0/0:18,0:17:39.10:0,39,470	0/0:8,0:8:9.03:0,9,110	0/0:7,0:7:21.05:0,21,245	0/0:7,0:7:18.06:0,18,221	0/0:9,0:9:21.07:0,21,257	0/1:3,5:8:61.79:86,0,62	0/0:8,0:8:21.05:0,21,245	0/0:6,0:6:17.95:0,18,200	0/0:12,0:12:30.07:0,30,355	0/0:19,0:19:39.11:0,39,466	0/0:10,0:10:21.04:0,21,243	0/0:2,0:2:6.02:0,6,73	0/0:1,0:1:3.01:0,3,37	0/0:5,0:5:6.02:0,6,73	0/0:2,0:2:6.02:0,6,74	0/0:15,0:15:36.07:0,36,414	0/0:16,0:16:36.10:0,36,432	0/0:12,0:12:30.08:0,30,355	0/1:8,1:9:21.84:22,0,266
chr10	100777294	.	AAGAG	A	54.57	PASS	AB=0.969;AC=8;AF=0.250;AN=32;BaseQRankSum=2.702;DP=497;FS=24.307;HRun=0;HaplotypeScore=85.0608;InbreedingCoeff=0.4553;MQ=74.47;MQ0=13;MQRankSum=-0.607;QD=0.56;ReadPosRankSum=0.345;VQSLOD=0.0832;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:24.08:0,24,371	0/0:10,0:10:9.03:0,9,137	./.	./.	./.	0/0:20,0:19:15.05:0,15,239	0/1:14,0:14:0:0,0,0	0/0:30,0:29:1.82:0,2,5	0/1:14,1:15:25.11:25,0,170	0/0:12,0:12:12.04:0,12,192	./.	./.	0/0:17,0:16:3.95:0,4,30	./.	0/0:28,0:27:39.13:0,39,691	./.	0/0:17,0:16:18.04:0,18,301	0/0:14,0:13:8.62:0,9,113	./.	1/1:19,0:19:3:28,3,0	./.	./.	./.	1/1:24,3:26:3.01:46,3,0	0/0:11,0:11:6.02:0,6,88	./.	1/1:19,0:22:7.82:61,8,0	0/0:12,0:10:1.25:0,1,3
chr10	100777827	.	A	AT	10285.46	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=0.042;DP=618;FS=15.378;HRun=8;HaplotypeScore=68.0901;InbreedingCoeff=0.9955;MQ=81.17;MQ0=0;MQRankSum=-6.973;QD=28.73;ReadPosRankSum=2.004;VQSLOD=3.8868;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:72.21:831,72,0	1/1:0,4:4:12.04:138,12,0	0/0:19,0:20:39.48:0,39,353	0/0:19,0:19:38.06:0,38,353	0/0:24,0:24:63:0,63,567	0/0:29,0:29:81.02:0,81,736	0/0:28,0:28:84.03:0,84,764	1/1:8,28:36:81.18:891,81,0	0/0:17,0:17:45.02:0,45,412	0/0:18,0:18:48.02:0,48,439	0/0:21,0:21:54.02:0,54,494	1/1:1,20:21:57.17:656,57,0	0/0:10,0:10:30.02:0,30,275	1/1:1,16:17:48.14:554,48,0	1/1:4,21:25:60.18:689,60,0	1/1:1,14:15:36.11:415,36,0	0/0:24,0:24:68.99:0,69,618	0/0:25,0:25:66.03:0,66,604	1/1:6,14:20:39.08:427,39,0	1/1:3,33:36:99:1127,99,0	1/1:0,21:21:60.18:692,60,0	1/1:2,14:16:42.04:452,42,0	1/1:2,23:25:40.35:670,40,0	1/1:1,25:26:69.20:793,69,0	0/0:24,1:25:68.99:0,69,621	1/1:6,19:25:32.69:619,33,0	1/1:2,27:29:84.12:949,84,0	1/1:1,12:13:33.10:381,33,0
chr10	100778098	.	GT	G	2312.04	PASS	AB=0.802;AC=13;AF=0.232;AN=56;BaseQRankSum=11.136;DP=588;FS=2.984;HRun=10;HaplotypeScore=60.1150;InbreedingCoeff=0.7589;MQ=71.12;MQ0=1;MQRankSum=0.464;QD=16.17;ReadPosRankSum=1.506;VQSLOD=4.1386;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:62.98:547,63,0	0/0:14,0:14:39.11:0,39,431	0/0:11,0:10:23.61:0,24,196	0/1:12,1:13:25.84:26,0,147	0/0:20,0:20:51.12:0,51,555	0/0:11,0:11:30.07:0,30,324	0/0:29,1:30:58.18:0,58,870	0/0:32,0:32:72.19:0,72,789	0/0:20,0:20:48.10:0,48,520	0/0:23,2:25:40.06:0,40,652	0/0:16,1:17:16.06:0,16,405	1/1:0,20:20:59.99:521,60,0	0/0:27,0:27:75.19:0,75,822	1/1:3,10:13:29.99:260,30,0	0/0:24,0:24:72.19:0,72,796	0/0:15,0:15:45.11:0,45,490	0/0:22,0:22:54.15:0,54,597	0/0:29,1:30:64.17:0,64,927	0/0:22,0:22:60.15:0,60,649	0/0:31,0:31:93.24:0,93,1020	0/1:10,0:10:0.56:1,0,208	1/1:0,17:17:47.99:417,48,0	1/1:1,15:16:35.99:313,36,0	0/1:3,22:25:6.37:409,0,6	0/0:26,1:27:36.94:0,37,612	0/0:26,0:26:63.14:0,63,680	0/0:21,0:21:57.15:0,57,630	0/0:20,0:20:45.11:0,45,490
chr10	100778509	.	GT	G	3019.32	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.953;DP=573;FS=4.885;HRun=7;HaplotypeScore=58.6740;InbreedingCoeff=0.9991;MQ=76.40;MQ0=0;MQRankSum=-2.842;QD=23.96;ReadPosRankSum=2.098;VQSLOD=4.1430;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:60.13:609,60,0	0/0:16,0:16:42.13:0,42,526	0/0:16,0:16:39.07:0,39,463	0/0:16,1:17:22.61:0,23,510	0/0:31,0:31:90.29:0,90,1132	0/0:29,0:29:84.25:0,84,1034	0/0:16,0:16:48.13:0,48,589	0/0:23,0:23:54.15:0,54,658	0/0:12,0:12:36.10:0,36,436	0/0:24,0:24:57.16:0,57,695	0/0:20,0:20:51.15:0,51,630	1/1:1,23:24:60.14:612,60,0	0/0:19,0:19:48.15:0,48,604	1/1:0,17:17:36.03:366,36,0	0/0:27,0:27:78.25:0,78,980	0/0:20,0:20:57.15:0,57,700	0/0:29,0:29:81.25:0,81,1006	0/0:22,0:22:57.18:0,57,717	0/0:17,0:17:36.08:0,36,427	0/0:15,0:15:45.14:0,45,566	0/0:18,0:18:51.15:0,51,629	1/1:0,17:17:48.11:488,48,0	1/1:1,17:18:44.95:459,45,0	1/1:1,24:25:66.15:673,66,0	0/0:18,0:18:54.17:0,54,679	0/0:26,0:26:72.21:0,72,882	0/0:22,0:22:60.18:0,60,742	0/0:10,0:10:27.09:0,27,340
chr10	100779526	.	C	CA	8062.30	PASS	AB=0.800;AC=28;AF=0.500;AN=56;BaseQRankSum=-11.621;DP=579;FS=10.069;HRun=9;HaplotypeScore=59.0622;InbreedingCoeff=0.8593;MQ=70.80;MQ0=0;MQRankSum=-0.179;QD=25.43;ReadPosRankSum=2.478;VQSLOD=5.2505;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:33.09:365,33,0	0/0:10,0:10:26.99:0,27,234	0/0:27,0:22:52.63:0,53,411	0/1:19,0:11:37.09:71,0,37	0/0:23,1:24:29.80:0,30,488	0/0:19,0:19:53.98:0,54,469	0/0:18,0:18:44.98:0,45,390	1/1:5,23:28:46.12:728,46,0	0/0:11,0:11:32.99:0,33,286	0/0:26,0:26:59.02:0,59,501	0/0:23,0:23:62.98:0,63,547	1/1:1,15:17:45.12:497,45,0	0/0:19,0:19:50.97:0,51,439	1/1:1,17:18:48.13:531,48,0	0/0:16,0:16:47.99:0,48,416	1/1:3,27:31:81.05:877,81,0	0/0:24,0:24:62.94:0,63,540	0/0:21,0:21:23.71:0,24,366	1/1:3,13:16:39.11:431,39,0	1/1:4,19:23:57.11:617,57,0	1/1:0,16:16:42.11:465,42,0	1/1:2,20:22:60.12:650,60,0	1/1:2,22:24:60.16:660,60,0	0/1:2,4:6:14.02:88,0,14	0/0:23,0:23:65.97:0,66,570	1/1:3,26:29:55.14:826,55,0	1/1:5,22:27:60.16:664,60,0	1/1:4,17:23:56.82:593,57,0
chr10	100780249	.	G	GT	2060.89	PASS	AB=0.953;AC=15;AF=0.268;AN=56;BaseQRankSum=-7.318;DP=517;FS=10.416;HRun=12;HaplotypeScore=58.4312;InbreedingCoeff=0.7351;MQ=74.86;MQ0=0;MQRankSum=-1.419;QD=12.57;ReadPosRankSum=0.338;VQSLOD=2.6553;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,24:32:53.20:674,53,0	0/0:1,0:7:12:0,12,35	0/1:12,0:15:11.23:11,0,72	0/1:9,0:7:0:0,0,0	0/0:28,1:31:33.05:0,33,465	0/0:20,1:21:9.55:0,10,231	0/0:11,0:14:30.88:0,31,206	0/0:22,0:22:24.21:0,24,164	0/0:16,0:16:38.72:0,39,284	0/0:25,0:27:42.74:0,43,296	0/0:20,0:22:35.83:0,36,360	1/1:6,9:15:2.13:183,2,0	0/0:15,0:18:41.86:0,42,280	1/1:4,20:24:17.15:327,17,0	0/0:4,0:22:38.49:0,38,124	0/0:16,0:18:37.79:0,38,268	0/0:15,0:16:28.11:0,28,189	0/0:8,0:10:15.96:0,16,98	0/1:17,2:22:37.89:38,0,207	0/0:15,0:17:39.83:0,40,274	0/0:8,0:8:17.89:0,18,131	1/1:5,12:18:40.14:367,40,0	1/1:7,12:20:35.82:408,36,0	1/1:0,8:8:24.04:234,24,0	0/0:15,0:15:32.75:0,33,241	0/0:27,0:29:57.26:0,57,392	0/0:24,1:26:29.66:0,30,368	0/0:14,0:14:38.77:0,39,284
chr10	100781367	.	C	CTA	1865.61	PASS	AB=1.000;AC=16;AF=0.421;AN=38;BaseQRankSum=2.246;DP=242;FS=0.748;HRun=0;HaplotypeScore=53.9616;InbreedingCoeff=0.6761;MQ=67.46;MQ0=2;MQRankSum=-0.900;QD=15.81;ReadPosRankSum=-1.677;VQSLOD=2.6158;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/0:11,0:11:12.02:0,12,136	0/0:12,0:11:15.05:0,15,185	0/0:3,0:3:6.02:0,6,70	1/1:25,4:29:32.68:730,33,0	0/0:4,0:4:6.02:0,6,74	0/0:3,0:3:3.01:0,3,37	0/0:4,0:4:6.02:0,6,74	0/1:9,0:9:0:0,0,0	0/0:8,0:8:9.02:0,9,101	1/1:6,0:6:1.55:4,2,0	1/1:12,1:13:9.01:117,9,0	./.	0/0:19,0:19:32.87:0,33,371	0/0:14,0:14:27.07:0,27,320	1/1:2,4:6:11.97:157,12,0	0/1:16,0:16:24.95:128,0,25	./.	./.	./.	./.	0/0:10,0:9:21.07:0,21,259	1/1:15,1:16:36.04:433,36,0	1/1:11,2:13:18.01:233,18,0	1/1:9,1:10:17.99:213,18,0
chr10	100781380	.	TAC	T	1055.14	PASS	AB=0.942;AC=19;AF=0.452;AN=42;BaseQRankSum=7.851;DP=198;FS=1.480;HRun=0;HaplotypeScore=55.2936;InbreedingCoeff=0.5050;MQ=54.22;MQ0=6;MQRankSum=-1.719;QD=9.18;ReadPosRankSum=-1.493;VQSLOD=3.0048;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:5,0:2:0:0,0,0	./.	0/0:6,0:6:11.99:0,12,100	0/0:10,0:9:24.01:0,24,314	0/0:2,0:2:6:0,6,58	0/1:28,3:29:35.90:244,0,36	0/0:3,0:3:9.01:0,9,125	0/0:1,0:1:3.01:0,3,58	0/0:2,0:2:6.01:0,6,75	1/1:4,0:4:11.99:100,12,0	0/1:4,0:4:16.30:32,0,16	1/1:4,0:4:2.99:24,3,0	1/1:9,2:11:8.96:67,9,0	./.	0/0:17,0:16:10.70:0,11,558	0/0:11,0:10:30.06:0,30,485	1/1:6,1:7:17.76:133,18,0	0/1:9,3:12:13.43:53,0,13	./.	./.	0/1:3,0:3:0:0,0,0	./.	0/0:11,0:10:26.92:0,27,306	1/1:1,13:14:38.73:307,39,0	1/1:12,1:13:16.51:137,17,0	1/1:7,0:7:15.71:112,16,0
chr10	100781382	.	CAT	C	68.58	PASS	AB=0.980;AC=11;AF=0.324;AN=34;BaseQRankSum=3.488;DP=202;FS=1.300;HRun=0;HaplotypeScore=58.9405;InbreedingCoeff=0.2976;MQ=53.74;MQ0=6;MQRankSum=-2.385;QD=0.87;ReadPosRankSum=1.708;VQSLOD=1.4975;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	0/0:9,1:9:18.04:0,18,256	0/0:2,0:2:2.98:0,3,22	0/0:33,0:31:29.51:0,30,191	0/0:3,0:3:6.02:0,6,93	0/0:1,0:1:3.01:0,3,47	0/0:2,0:2:3:0,3,26	0/0:4,0:4:0:0,0,0	1/1:1,3:4:6.02:71,6,0	./.	./.	./.	0/1:16,2:17:26.42:26,0,519	0/0:11,0:10:24.05:0,24,349	0/1:8,0:8:6.81:7,0,17	0/1:11,0:11:0:0,0,0	./.	./.	0/1:3,0:3:0:0,0,0	./.	0/0:11,0:11:15.92:0,16,205	1/1:14,0:14:6.05:36,6,0	1/1:13,0:13:3.11:28,3,0	0/1:8,0:8:6.62:8,0,7
chr10	100781389	.	A	ATG	484.19	PASS	AB=0.924;AC=9;AF=0.237;AN=38;BaseQRankSum=3.049;DP=185;FS=1.799;HRun=0;HaplotypeScore=56.8110;InbreedingCoeff=0.2219;MQ=45.27;MQ0=6;MQRankSum=-2.024;QD=5.83;ReadPosRankSum=-0.944;VQSLOD=2.4622;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/0:2,0:2:3:0,3,25	0/0:9,0:8:21.04:0,21,278	0/0:1,0:1:2.99:0,3,24	0/1:31,1:30:92.46:228,0,92	0/0:3,0:3:9.02:0,9,116	0/0:1,0:1:3.01:0,3,46	0/0:2,0:2:3:0,3,25	0/0:3,0:3:5.99:0,6,49	0/0:4,0:4:5.97:0,6,43	0/0:4,0:4:2.99:0,3,24	./.	./.	0/0:18,0:17:48.06:0,48,628	0/0:12,0:11:30.05:0,30,392	0/1:6,1:7:32.82:58,0,33	1/1:9,0:9:5.97:45,6,0	./.	./.	0/1:4,0:4:0:0,0,0	./.	0/0:12,0:11:10.60:0,11,287	0/1:10,1:11:9.85:106,0,10	0/1:10,2:12:0.01:77,0,0	1/1:7,1:8:11.65:87,12,0
chr10	100781403	.	ATATGTATATATG	A	933.15	PASS	AB=0.866;AC=14;AF=0.333;AN=42;BaseQRankSum=5.494;DP=196;FS=10.603;HRun=0;HaplotypeScore=83.2973;InbreedingCoeff=0.3854;MQ=45.25;MQ0=6;MQRankSum=-4.759;QD=9.93;ReadPosRankSum=0.056;VQSLOD=0.7343;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:4,0:4:0:0,0,0	./.	./.	0/0:9,0:9:24.08:0,24,368	0/0:11,0:10:21.07:0,21,945	0/0:4,0:4:9.03:0,9,153	1/1:11,17:26:39.12:716,39,0	0/0:3,0:3:9.03:0,9,306	0/0:3,0:3:9.03:0,9,130	0/0:3,0:3:6.02:0,6,111	1/1:2,0:2:6.01:75,6,0	0/0:3,0:3:6.02:0,6,213	./.	0/1:7,0:7:0:0,0,0	0/1:1,0:4:0:0,0,0	0/0:21,0:20:54.18:0,54,2117	0/0:13,0:12:30.10:0,30,1081	0/1:9,0:9:34.46:93,0,34	0/0:7,0:7:2.51:0,3,6	./.	./.	1/1:8,0:8:0.21:0,0,0	./.	0/0:9,0:8:18.06:0,18,752	0/1:9,0:9:17.11:17,0,52	0/1:6,0:15:16.91:17,0,48	1/1:8,0:8:7.51:140,8,0
chr10	100781405	.	ATGTATATATG	A	872.62	PASS	AB=0.891;AC=14;AF=0.333;AN=42;BaseQRankSum=5.424;DP=196;FS=8.500;HRun=0;HaplotypeScore=77.5836;InbreedingCoeff=0.3712;MQ=45.16;MQ0=6;MQRankSum=-4.604;QD=9.48;ReadPosRankSum=-0.295;VQSLOD=0.6766;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:4,0:4:0:0,0,0	./.	./.	0/0:9,0:9:24.08:0,24,368	0/0:11,0:10:21.07:0,21,827	0/0:4,0:4:9.03:0,9,153	1/1:27,0:25:4.43:494,4,0	0/0:3,0:3:9.03:0,9,260	0/0:3,0:3:9.02:0,9,103	0/0:2,0:2:6.02:0,6,111	1/1:3,0:3:9.03:167,9,0	0/0:3,0:3:6.02:0,6,177	./.	0/1:3,2:7:0:0,0,0	0/1:4,0:4:0:0,0,0	0/0:23,0:22:60.20:0,60,1892	0/0:14,0:13:33.11:0,33,953	0/1:8,0:9:11.74:63,0,12	0/0:1,1:7:2.04:0,2,6	./.	./.	1/1:2,7:9:0.44:1,0,0	./.	0/0:9,0:8:18.06:0,18,681	0/1:6,0:7:33.70:61,0,34	0/1:13,1:14:22.82:31,0,23	1/1:6,2:8:8.43:180,8,0
chr10	100781415	.	GTA	G	53.64	PASS	AB=0.900;AC=17;AF=0.340;AN=50;BaseQRankSum=6.036;DP=219;FS=1.044;HRun=0;HaplotypeScore=58.4640;InbreedingCoeff=0.4303;MQ=46.67;MQ0=6;MQRankSum=-3.686;QD=0.54;ReadPosRankSum=1.330;VQSLOD=1.3696;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:0.47:1,0,0	0/1:0,3:3:0:0,0,0	./.	./.	0/0:10,0:10:9.33:0,9,406	0/0:12,0:11:27.08:0,27,450	0/0:5,0:5:15.05:0,15,259	0/1:26,0:24:32.23:32,0,159	0/0:6,0:6:18.06:0,18,302	0/0:4,0:4:11.92:0,12,143	0/0:5,0:5:15.05:0,15,259	0/0:3,0:3:0:0,0,0	0/0:5,0:5:12.01:0,12,152	./.	1/1:4,4:8:3.01:41,3,0	0/0:7,0:7:2.81:0,3,19	0/0:21,0:20:53.85:0,54,808	0/0:13,0:12:33.08:0,33,509	0/1:11,0:11:12.19:12,0,15	1/1:8,0:8:0.20:0,0,0	0/0:3,0:3:2.92:0,3,17	0/0:5,0:4:3:0,3,25	0/1:8,0:8:0.03:0,0,0	0/1:5,0:5:0.03:0,0,0	0/0:10,0:9:14.08:0,14,335	1/1:6,0:6:7.38:40,7,0	1/1:13,0:13:5.23:31,5,0	1/1:8,0:8:4:22,4,0
chr10	100781795	.	CCTTTCTTT	C	2086.51	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=4.538;DP=616;FS=2.437;HRun=0;HaplotypeScore=157.3218;InbreedingCoeff=0.9448;MQ=56.46;MQ0=5;MQRankSum=-5.596;QD=22.44;ReadPosRankSum=1.258;VQSLOD=3.3093;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:33.96:0,34,592	0/0:5,0:11:15:0,15,297	./.	./.	0/0:26,0:26:48.16:0,48,1689	0/0:17,0:21:36.05:0,36,940	0/0:21,0:21:33.07:0,33,1057	0/0:34,0:30:20.95:0,21,227	0/0:16,0:16:39.13:0,39,1374	0/0:28,0:28:57.20:0,57,1970	0/0:21,0:22:45.14:0,45,1514	0/0:23,0:23:42.12:0,42,860	0/0:27,0:27:60.18:0,60,1871	0/0:24,0:24:48.15:0,48,820	0/0:12,0:28:21.07:0,21,586	1/1:16,14:30:24.08:595,24,0	0/0:25,0:25:45.15:0,45,1592	0/0:25,0:25:36.08:0,36,1098	1/1:12,6:16:14.71:285,15,0	1/1:12,15:27:39.07:914,39,0	0/0:13,0:25:26.97:0,27,268	0/0:8,0:21:27.35:0,27,370	0/0:10,0:28:27.18:0,27,555	0/0:9,0:20:9.03:0,9,301	0/0:20,0:20:36.12:0,36,1313	0/0:9,0:23:9.20:0,9,308	1/1:6,12:18:17.89:447,18,0	0/0:8,0:10:12.01:0,12,188
chr10	100782460	.	C	CA	1574.93	PASS	AB=0.737;AC=16;AF=0.286;AN=56;BaseQRankSum=0.991;DP=463;FS=3.230;HRun=9;HaplotypeScore=64.2567;InbreedingCoeff=0.8028;MQ=86.93;MQ0=6;MQRankSum=1.170;QD=16.75;ReadPosRankSum=1.239;VQSLOD=3.9241;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:48.13:530,48,0	1/1:0,5:5:9.02:100,9,0	0/0:53,0:34:13.14:0,13,186	0/0:33,0:16:5.23:0,5,109	0/0:18,0:18:50.95:0,51,433	0/0:14,0:14:35.99:0,36,312	0/0:18,0:17:38.89:0,39,324	0/0:15,0:15:32.95:0,33,277	0/0:11,0:11:23.98:0,24,208	0/0:24,0:24:59.82:0,60,509	0/0:24,0:24:50.93:0,51,436	1/1:3,4:7:12.03:133,12,0	0/0:7,0:7:18:0,18,156	1/1:1,7:8:21.06:232,21,0	1/1:4,5:9:3.21:121,3,0	0/0:11,0:11:23.95:0,24,203	0/0:19,0:19:52.04:0,52,421	0/0:18,0:18:47.94:0,48,407	0/1:15,1:16:0.21:0,0,223	0/0:29,1:30:47.73:0,48,627	0/0:11,0:12:28.96:0,29,232	1/1:0,11:10:27.07:299,27,0	1/1:1,10:11:18.05:199,18,0	0/1:1,7:8:8:148,0,8	0/0:18,0:17:44.97:0,45,387	0/0:16,0:16:41.96:0,42,360	0/0:18,0:18:38.98:0,39,339	0/0:9,0:9:20.99:0,21,182
chr10	100782546	.	G	GA	1007.59	PASS	AB=0.908;AC=21;AF=0.389;AN=54;BaseQRankSum=0.409;DP=395;FS=30.461;HRun=14;HaplotypeScore=86.5947;InbreedingCoeff=0.4804;MQ=43.50;MQ0=36;MQRankSum=-3.059;QD=5.14;ReadPosRankSum=-3.161;VQSLOD=-0.5427;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:14:11.53:0,12,55	1/1:4,0:3:2.92:17,3,0	./.	0/0:6,0:1:2.94:0,3,18	0/0:19,1:18:11.15:0,11,76	0/0:13,0:11:16.77:0,17,99	0/0:5,0:4:1.96:0,2,6	1/1:17,7:23:9.33:174,9,0	0/0:8,0:7:2.74:0,3,18	0/0:19,0:20:26.19:0,26,159	0/1:22,1:23:19.44:19,0,64	0/0:5,0:6:7.61:0,8,36	0/0:9,0:7:14.73:0,15,94	0/0:5,0:4:2.03:0,2,6	1/1:14,1:17:16.29:187,16,0	0/1:9,4:13:9.80:33,0,10	0/0:41,0:38:37.96:0,38,238	0/0:17,0:16:5.18:0,5,34	1/1:7,3:10:17.81:133,18,0	1/1:17,2:16:1.79:123,2,0	1/1:7,0:5:3:26,3,0	0/0:6,0:6:8.11:0,8,24	0/0:7,0:7:4.97:0,5,24	0/0:5,0:9:10.36:0,10,31	0/1:18,0:18:12.79:13,0,48	1/1:12,5:16:20.82:157,21,0	1/1:11,6:17:26.66:179,27,0	1/1:18,4:9:2.39:119,2,0
chr10	100783856	.	G	GA	8772.87	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-14.401;DP=552;FS=0.000;HRun=7;HaplotypeScore=54.6908;InbreedingCoeff=0.9969;MQ=80.23;MQ0=0;MQRankSum=-2.550;QD=29.15;ReadPosRankSum=1.046;VQSLOD=5.2886;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:23:51.16:614,51,0	1/1:1,9:10:18.06:217,18,0	0/0:18,0:18:22.17:0,22,235	0/0:12,0:13:18.25:0,18,170	0/0:20,0:20:57.06:0,57,542	0/0:23,0:23:54.08:0,54,521	0/0:19,0:19:54.05:0,54,510	1/1:5,30:35:90.21:1028,90,0	0/0:26,0:26:75.10:0,75,717	0/0:21,0:21:57.09:0,57,550	0/0:30,0:30:78.12:0,78,752	1/1:3,10:13:30.09:362,30,0	0/0:28,0:29:77.14:0,77,724	1/1:1,16:17:42.13:507,42,0	1/1:1,18:19:45.14:544,45,0	1/1:0,15:15:42.13:507,42,0	0/0:24,0:24:60.07:0,60,572	0/0:12,0:12:30.02:0,30,283	1/1:4,16:20:48.10:546,48,0	1/1:3,15:19:47.93:526,48,0	1/1:1,19:20:48.15:580,48,0	1/1:1,19:20:54.16:643,54,0	1/1:2,15:17:42.13:507,42,0	1/1:0,16:16:42.13:507,42,0	0/0:16,0:16:39.89:0,40,365	1/1:2,18:20:28.19:612,28,0	1/1:5,21:26:63.18:747,63,0	1/1:1,10:11:27.08:326,27,0
chr10	100784427	.	GTTAA	G	3988.84	PASS	AB=0.833;AC=28;AF=0.560;AN=50;BaseQRankSum=9.722;DP=344;FS=0.595;HRun=0;HaplotypeScore=57.3439;InbreedingCoeff=0.7187;MQ=82.75;MQ0=2;MQRankSum=-0.310;QD=19.27;ReadPosRankSum=-2.795;VQSLOD=2.8398;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,11:19:33.11:528,33,0	1/1:1,4:5:9.03:144,9,0	./.	0/1:12,0:12:0:0,0,0	0/0:15,0:15:18.06:0,18,410	0/0:14,0:14:27.09:0,27,637	0/0:3,0:3:3.01:0,3,72	1/1:25,16:41:48.10:661,48,0	0/0:10,0:10:6.01:0,6,97	0/0:8,0:8:9.03:0,9,216	0/0:9,0:9:9.03:0,9,216	1/1:10,2:12:6.02:96,6,0	0/0:9,0:9:15.05:0,15,356	1/1:3,3:6:3.01:48,3,0	1/1:6,4:10:12.04:192,12,0	1/1:3,5:7:12.04:192,12,0	0/0:19,0:19:48.16:0,48,1145	0/0:19,0:19:45.15:0,45,1076	1/1:8,11:19:33.07:470,33,0	1/1:6,2:8:6.02:88,6,0	1/1:6,6:12:15.05:240,15,0	./.	1/1:5,1:6:3.01:48,3,0	./.	0/0:15,0:15:24.08:0,24,577	0/1:11,11:22:91.35:484,0,91	1/1:0,10:11:24.08:364,24,0	1/1:4,11:15:27.09:432,27,0
chr10	100785654	.	GACTTCTAATGC	G	10875.80	PASS	AB=0.973;AC=13;AF=0.232;AN=56;BaseQRankSum=14.863;DP=683;FS=19.066;HRun=0;HaplotypeScore=220.1861;InbreedingCoeff=0.9392;MQ=86.66;MQ0=0;MQRankSum=-15.909;QD=62.87;ReadPosRankSum=1.660;VQSLOD=2.8089;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,24:35:87.22:2355,87,0	0/0:10,0:10:27.07:0,27,1331	0/0:25,0:25:69.18:0,69,2715	0/0:25,0:25:69.23:0,69,3127	0/0:30,0:30:90.28:0,90,4345	0/0:18,0:18:54.19:0,54,3026	0/0:23,0:23:69.22:0,69,3603	0/0:25,0:24:72.24:0,72,3617	0/0:20,0:20:60.21:0,60,3343	0/0:23,0:23:63.22:0,63,3500	0/0:17,0:17:51.15:0,51,2486	1/1:0,16:16:45.15:1587,45,0	0/0:32,0:32:93.31:0,93,5071	1/1:0,37:34:81.28:2862,81,0	0/0:34,0:34:96.30:0,96,4883	0/0:40,0:40:99:0,108,5830	0/0:30,0:30:90.28:0,90,4896	0/0:16,0:16:39.13:0,39,2149	0/0:23,0:23:69.22:0,69,3264	0/1:35,1:36:1.56:2,0,5589	0/0:17,0:17:48.16:0,48,2495	1/1:1,17:18:51.18:1817,51,0	1/1:1,13:14:39.13:1389,39,0	1/1:8,9:17:30.07:864,30,0	0/0:28,0:28:84.28:0,84,4281	0/0:30,0:30:90.28:0,90,4589	0/0:32,0:32:90.27:0,90,4725	0/0:12,0:12:30.09:0,30,1401
chr10	100785746	.	G	GT	14607.49	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-14.242;DP=736;FS=9.345;HRun=1;HaplotypeScore=80.2159;InbreedingCoeff=0.9978;MQ=82.94;MQ0=3;MQRankSum=-3.773;QD=34.13;ReadPosRankSum=4.214;VQSLOD=4.3982;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,43:50:99:1889,131,0	1/1:0,10:10:18.06:263,18,0	0/0:35,0:33:96.10:0,96,1170	0/0:18,0:17:49.80:0,50,519	0/0:23,0:23:62.90:0,63,766	0/0:20,0:20:60.17:0,60,782	0/0:30,0:30:87.24:0,87,1114	1/1:2,24:26:66.14:842,66,0	0/0:20,0:20:54.13:0,54,695	0/0:28,0:28:81.24:0,81,1062	0/0:18,0:18:51.15:0,51,693	1/1:2,13:15:45.08:616,45,0	0/0:23,0:23:69.17:0,69,884	1/1:6,21:24:65.94:852,66,0	1/1:2,33:35:85.16:1231,85,0	1/1:0,23:23:48.13:701,48,0	0/0:33,0:33:99:0,99,1326	0/0:26,0:26:75.16:0,75,963	1/1:0,19:19:57.09:721,57,0	1/1:4,28:32:76.65:1136,77,0	1/1:4,21:25:35.97:715,36,0	1/1:3,29:32:78.26:1133,78,0	1/1:2,22:24:57.12:806,57,0	1/1:5,25:29:51.25:916,51,0	0/0:34,0:34:99:0,99,1317	1/1:2,34:36:21.59:1299,22,0	1/1:2,32:34:81.26:1179,81,0	1/1:0,9:9:21.07:307,21,0
chr10	100786648	.	TTA	T	4163.16	PASS	AB=0.545;AC=19;AF=0.339;AN=56;BaseQRankSum=10.945;DP=340;FS=1.008;HRun=0;HaplotypeScore=41.3269;InbreedingCoeff=0.7675;MQ=78.75;MQ0=3;MQRankSum=1.299;QD=25.70;ReadPosRankSum=-1.643;VQSLOD=3.3026;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,1:15:1.24:0,1,520	1/1:2,3:5:9.03:114,9,0	0/0:13,0:12:0.77:0,1,17	0/0:11,0:4:2.98:0,3,29	0/0:14,0:14:33.11:0,33,549	0/0:12,0:12:33.11:0,33,549	0/0:4,0:4:9.01:0,9,124	1/1:4,39:43:99:1429,117,0	0/0:6,0:6:12.04:0,12,195	0/0:8,0:8:18.05:0,18,277	0/0:7,0:7:15.05:0,15,246	0/0:6,0:6:15.05:0,15,243	0/0:6,0:6:12.04:0,12,196	0/0:6,0:6:12.04:0,12,200	1/1:0,10:10:15.05:189,15,0	1/1:3,13:16:27.09:341,27,0	0/0:16,0:16:42.14:0,42,691	0/0:17,0:17:39.13:0,39,648	1/1:7,11:18:36.11:449,36,0	1/1:4,13:17:24.08:303,24,0	1/1:1,3:4:6.02:76,6,0	0/0:8,0:8:15.04:0,15,218	0/0:6,0:6:9.03:0,9,146	0/0:5,1:5:6.02:0,6,100	0/0:17,0:17:39.13:0,39,639	0/1:3,14:18:4.92:454,0,5	1/1:0,19:20:47.98:582,48,0	1/1:4,7:11:18.06:227,18,0
chr10	100786918	.	G	GA	1227.62	PASS	AB=0.953;AC=37;AF=0.661;AN=56;BaseQRankSum=4.713;DP=511;FS=6.421;HRun=16;HaplotypeScore=77.2657;InbreedingCoeff=0.2810;MQ=77.02;MQ0=4;MQRankSum=-0.529;QD=2.99;ReadPosRankSum=0.633;VQSLOD=-0.0757;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:21.08:95,21,0	1/1:6,0:6:5.20:28,5,0	0/1:35,0:19:7.51:8,0,40	0/0:32,1:18:4.27:0,4,39	0/1:15,4:19:10.21:10,0,51	0/0:11,0:12:10.62:0,11,56	0/0:17,0:21:16.46:0,16,136	0/1:26,0:26:9.43:92,0,9	0/1:10,3:13:29.08:29,0,39	0/1:15,1:16:10.91:11,0,38	0/1:11,0:12:0.86:1,0,74	1/1:13,0:13:5.68:28,6,0	0/0:17,0:17:8.28:0,8,49	1/1:13,0:12:12.26:64,12,0	1/1:7,0:18:8.56:43,9,0	0/1:21,0:21:0.01:137,0,0	0/0:14,0:16:13.84:0,14,75	0/1:20,0:19:10.42:10,0,38	1/1:13,0:13:16:71,16,0	1/1:22,0:22:27.67:176,28,0	1/1:18,0:18:8.86:141,9,0	1/1:10,0:10:3.63:14,4,0	1/1:16,0:16:5.68:28,6,0	1/1:16,0:16:9.16:40,9,0	0/1:19,0:22:4.69:5,0,57	1/1:23,0:23:44.82:200,45,0	1/1:21,1:22:9:93,9,0	1/1:7,0:7:19.08:80,19,0
chr10	100786922	.	A	AAAAAAAAC	2049.89	PASS	AB=0.737;AC=11;AF=0.196;AN=56;BaseQRankSum=-0.889;DP=525;FS=0.682;HRun=0;HaplotypeScore=139.6475;InbreedingCoeff=0.5990;MQ=75.03;MQ0=4;MQRankSum=-4.528;QD=17.67;ReadPosRankSum=0.626;VQSLOD=2.9397;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,22:39:8.01:759,8,0	0/1:5,0:5:35.76:51,0,36	0/0:35,0:19:21.32:0,21,218	0/0:32,0:16:20.56:0,21,265	0/0:21,0:21:47.50:0,47,584	0/0:12,0:12:24.05:0,24,394	0/0:23,0:23:57.05:0,57,900	0/0:26,0:26:58.88:0,59,861	0/0:14,0:14:31.86:0,32,460	0/0:15,0:15:34.13:0,34,437	0/0:13,0:13:35.29:0,35,572	1/1:5,8:16:5.83:233,6,0	0/0:14,0:14:41.99:0,42,487	1/1:12,0:11:15.62:333,16,0	0/0:17,0:17:6.70:0,7,108	0/0:22,0:22:52.30:0,52,915	0/0:13,0:13:30.03:0,30,433	0/0:22,0:21:49.80:0,50,539	0/0:15,0:15:35.09:0,35,377	0/0:21,0:21:49.44:0,49,870	0/0:18,0:18:45.13:0,45,779	0/1:4,5:10:12:107,0,12	0/1:5,11:17:15.74:224,0,16	1/1:4,10:17:15.50:504,15,0	0/0:25,0:25:52.51:0,53,639	0/0:24,0:24:52.76:0,53,790	0/0:19,0:19:42.35:0,42,529	0/0:7,0:7:21.07:0,21,399
chr10	100786930	.	A	AC	3620.50	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-8.341;DP=493;FS=26.154;HRun=0;HaplotypeScore=60.2521;InbreedingCoeff=0.9112;MQ=72.01;MQ0=4;MQRankSum=3.691;QD=22.08;ReadPosRankSum=5.902;VQSLOD=2.3724;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:35.30:0,35,214	0/0:3,0:3:6.86:0,7,51	0/0:31,0:16:32.81:0,33,222	0/0:24,0:10:16.20:0,16,155	0/0:21,0:21:55.13:0,55,505	0/0:11,0:11:29.97:0,30,293	0/0:27,0:27:71.79:0,72,732	1/1:5,25:32:61.34:705,61,0	0/0:16,0:16:39.05:0,39,361	0/0:17,0:17:41.10:0,41,407	0/0:12,0:12:33.98:0,34,339	0/0:9,0:9:11.49:0,11,77	0/0:16,0:16:48.04:0,48,465	0/0:11,0:10:11.53:0,12,101	0/0:19,0:19:26.53:0,27,197	1/1:9,12:22:54.53:574,55,0	0/0:14,0:14:38.96:0,39,384	0/0:22,0:21:58.84:0,59,510	1/1:3,12:16:6.25:322,6,0	1/1:3,19:24:56.74:551,57,0	1/1:3,20:24:16.68:415,17,0	0/0:6,0:6:14.32:0,14,89	0/0:7,0:7:8.49:0,8,51	0/0:16,0:16:20.13:0,20,135	0/0:22,0:22:59.03:0,59,563	1/1:1,19:21:53.90:593,54,0	1/1:4,11:18:3.81:211,4,0	1/1:0,7:7:21.06:250,21,0
chr10	100787820	.	AG	A	9249.64	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=11.080;DP=680;FS=2.485;HRun=6;HaplotypeScore=79.0194;InbreedingCoeff=0.9745;MQ=85.74;MQ0=0;MQRankSum=-3.432;QD=26.50;ReadPosRankSum=0.532;VQSLOD=5.1526;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,21:29:75.14:784,75,0	0/0:17,0:17:42.14:0,42,552	0/0:32,0:32:64.25:0,64,675	0/0:21,0:21:33.99:0,34,381	0/0:30,0:30:74.11:0,74,909	0/0:24,0:24:66.15:0,66,809	0/0:14,0:14:36.10:0,36,459	1/1:4,40:44:99:1256,120,0	0/0:16,0:16:45.15:0,45,592	0/0:35,0:35:96.25:0,96,1201	0/0:22,0:22:60.16:0,60,757	1/1:1,23:24:66.17:709,66,0	0/0:23,0:23:66.19:0,66,839	1/1:0,9:9:24.06:258,24,0	0/0:28,0:28:78.24:0,78,1011	1/1:3,9:12:33.06:341,33,0	0/0:19,0:19:46.55:0,47,578	0/0:28,0:28:84.26:0,84,1090	1/1:8,16:24:71.99:735,72,0	1/1:7,37:44:99:1060,107,0	1/1:2,16:18:24.06:258,24,0	1/1:4,24:28:78.16:817,78,0	1/1:3,24:27:63.14:668,63,0	1/1:3,12:15:42.01:428,42,0	0/0:22,0:22:60.18:0,60,765	1/1:8,26:34:3.91:810,4,0	1/1:2,35:37:93.23:997,93,0	1/1:0,4:4:12.03:129,12,0
chr10	100787826	.	GA	G	1043.60	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=16.265;DP=664;FS=1.695;HRun=8;HaplotypeScore=106.4288;InbreedingCoeff=0.4152;MQ=80.13;MQ0=0;MQRankSum=-2.513;QD=2.96;ReadPosRankSum=3.404;VQSLOD=-0.5406;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:7.98:108,0,8	0/0:16,0:16:42.12:0,42,495	0/0:22,1:23:21.25:0,21,469	0/0:22,0:22:29.25:0,29,321	0/0:25,2:27:40.17:0,40,737	0/0:21,0:21:60.13:0,60,689	0/0:13,0:13:36.10:0,36,423	0/1:43,0:43:9.35:109,0,9	0/0:15,0:15:45.14:0,45,542	0/0:33,1:34:64.32:0,64,1047	0/0:20,0:20:60.17:0,60,711	1/1:24,0:24:19.95:105,20,0	0/0:22,0:22:60.18:0,60,724	0/1:10,0:10:24.82:28,0,25	0/0:28,0:28:75.22:0,75,893	1/1:11,0:11:16.71:57,17,0	0/0:18,1:19:25.19:0,25,563	0/0:31,0:31:87.23:0,87,1022	0/1:32,0:32:36.62:37,0,150	1/1:40,0:40:29.30:177,29,0	0/1:17,0:17:4.86:34,0,5	0/1:30,0:30:22.39:77,0,22	0/1:29,0:29:38.68:94,0,39	1/1:14,0:14:25.25:83,25,0	0/0:21,0:21:60.05:0,60,703	0/1:33,0:33:9.78:89,0,10	1/1:36,0:36:44.46:215,44,0	1/1:4,0:4:8.04:25,8,0
chr10	100787896	.	AT	A	6325.38	PASS	AB=0.906;AC=35;AF=0.625;AN=56;BaseQRankSum=12.524;DP=545;FS=0.706;HRun=10;HaplotypeScore=68.4775;InbreedingCoeff=0.8088;MQ=78.35;MQ0=0;MQRankSum=-2.899;QD=17.24;ReadPosRankSum=1.284;VQSLOD=5.3556;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,39:41:77.78:904,78,0	1/1:0,0:7:10.18:30,10,0	0/1:14,1:14:2.60:3,0,206	0/0:17,0:16:26.99:0,27,242	0/1:16,1:18:2.85:3,0,398	0/0:23,1:24:37.11:0,37,631	0/0:16,1:17:22.03:0,22,458	1/1:10,23:33:68.95:593,69,0	0/0:19,0:19:54.15:0,54,597	0/0:19,0:19:54.12:0,54,569	0/0:15,1:16:16.02:0,16,392	1/1:5,11:16:38.95:331,39,0	0/1:12,3:15:10:10,0,356	1/1:1,13:14:38.99:338,39,0	1/1:1,0:19:32.59:96,33,0	1/1:1,15:16:41.99:365,42,0	0/0:19,0:19:54.15:0,54,597	0/0:18,0:19:47.96:0,48,512	1/1:4,18:22:53.97:466,54,0	1/1:4,16:20:17.81:383,18,0	1/1:1,13:14:38.99:339,39,0	1/1:4,17:21:53.98:468,54,0	1/1:1,15:16:44.99:391,45,0	1/1:4,21:25:59.98:521,60,0	0/0:28,0:28:69.19:0,69,762	1/1:7,21:29:7.64:512,8,0	1/1:4,18:22:53.97:469,54,0	1/1:0,4:4:12:104,12,0
chr10	100789076	.	ACT	A	842.62	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.039;DP=731;FS=5.174;HRun=0;HaplotypeScore=94.6913;InbreedingCoeff=0.9989;MQ=82.15;MQ0=0;MQRankSum=-8.076;QD=23.41;ReadPosRankSum=1.648;VQSLOD=4.3631;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.26:0,84,1640	1/1:0,9:9:27:238,27,0	0/0:30,0:30:90.31:0,90,1779	0/0:21,0:21:63.15:0,63,1199	0/0:37,0:37:99:0,111,2224	0/0:22,0:22:66.23:0,66,1325	0/0:20,0:20:60.18:0,60,1165	0/0:34,0:34:99:0,102,2009	0/0:21,0:21:63.22:0,63,1276	0/0:33,0:33:96.33:0,96,1906	0/0:16,0:16:48.16:0,48,973	0/0:28,0:28:84.29:0,84,1689	0/0:24,0:24:72.25:0,72,1462	0/0:33,0:33:99:0,99,1993	1/1:1,25:27:80.93:726,81,0	0/0:33,0:33:99:0,99,2011	0/0:22,0:22:66.23:0,66,1341	0/0:18,0:18:54.19:0,54,1097	0/0:28,0:28:84.27:0,84,1599	0/0:38,0:38:99:0,114,2247	0/0:27,0:27:81.26:0,81,1607	0/0:22,0:22:63.22:0,63,1250	0/0:35,0:35:99:0,102,2048	0/0:33,0:33:99:0,99,1996	0/0:27,0:27:81.28:0,81,1646	0/0:22,0:22:66.20:0,66,1270	0/0:34,0:34:99:0,102,2032	0/0:9,0:9:27.09:0,27,549
chr10	100789079	.	T	TGGGA	2232.50	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.657;DP=733;FS=2.951;HRun=0;HaplotypeScore=122.3748;InbreedingCoeff=0.9989;MQ=80.78;MQ0=0;MQRankSum=-9.238;QD=58.75;ReadPosRankSum=0.978;VQSLOD=5.2422;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.26:0,84,1592	1/1:0,9:9:27.09:552,27,0	0/0:29,0:29:84.29:0,84,1640	0/0:22,0:22:60.20:0,60,1114	0/0:37,0:37:99:0,111,2207	0/0:23,0:23:69.21:0,69,1306	0/0:22,0:22:60.18:0,60,1128	0/0:33,0:33:96.33:0,96,1917	0/0:22,0:22:63.19:0,63,1187	0/0:34,0:34:93.32:0,93,1853	0/0:17,0:17:48.13:0,48,888	0/0:29,0:29:87.30:0,87,1719	0/0:24,0:24:72.25:0,72,1437	0/0:32,0:32:93.32:0,93,1856	1/1:4,25:29:87.28:1802,87,0	0/0:33,0:33:93.31:0,93,1813	0/0:23,0:23:66.21:0,66,1282	0/0:19,0:19:54.19:0,54,1069	0/0:26,0:26:72.25:0,72,1437	0/0:37,0:37:99:0,111,2163	0/0:26,0:26:78.27:0,78,1538	0/0:21,0:21:60.21:0,60,1198	0/0:36,0:36:96.33:0,96,1898	0/0:36,0:36:99:0,102,1997	0/0:26,0:26:78.25:0,78,1523	0/0:20,0:20:60.21:0,60,1198	0/0:31,0:31:90.31:0,90,1798	0/0:9,0:9:27.09:0,27,539
chr10	100790298	.	ACACACACACACACG	A	6242.21	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=1.225;DP=569;FS=14.836;HRun=0;HaplotypeScore=264.9912;InbreedingCoeff=-0.1310;MQ=56.64;MQ0=22;MQRankSum=-3.286;QD=12.90;ReadPosRankSum=0.468;VQSLOD=1.9855;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:80.72:81,0,1204	0/1:20,0:19:21.97:22,0,1081	0/1:53,0:11:10.67:63,0,11	0/1:40,0:12:5.96:28,0,6	0/1:19,0:18:4.36:4,0,1945	0/0:28,0:28:9.18:0,9,2620	0/1:17,0:17:11.78:12,0,1498	1/1:20,0:20:29.91:268,30,0	0/1:10,0:10:32.89:33,0,404	0/1:18,0:18:27:27,0,1278	0/1:16,0:16:17.83:18,0,1062	0/0:22,0:21:38.92:0,39,2026	0/1:19,0:19:10.79:11,0,1588	0/0:18,0:17:9.14:0,9,1525	0/1:24,0:24:46.80:47,0,599	1/1:12,5:17:39.04:831,39,0	0/1:15,0:15:99:103,0,827	0/1:26,0:26:20.43:20,0,2861	1/1:10,2:12:20.92:353,21,0	1/1:10,8:18:42.10:1332,42,0	1/1:6,1:7:3.01:121,3,0	0/1:24,0:24:1.89:2,0,2038	0/1:13,0:12:26.87:27,0,888	0/1:17,0:17:20.88:21,0,822	0/0:17,0:17:7.23:0,7,1362	1/1:9,8:16:39.04:909,39,0	1/1:9,8:17:45.01:1040,45,0	1/1:12,6:18:36.02:871,36,0
chr10	100790751	.	T	TG	3753.62	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-7.531;DP=608;FS=16.175;HRun=8;HaplotypeScore=73.7546;InbreedingCoeff=0.9595;MQ=77.60;MQ0=1;MQRankSum=-3.256;QD=22.08;ReadPosRankSum=-0.830;VQSLOD=2.2224;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,32:36:56.81:910,57,0	0/0:1,0:8:10.18:0,10,30	0/0:34,0:27:35.83:0,36,395	0/0:13,0:13:17.39:0,17,115	0/0:13,0:13:29.98:0,30,266	0/0:21,0:21:56.99:0,57,510	0/0:21,0:20:44.88:0,45,385	1/1:5,17:22:51.12:568,51,0	0/0:14,0:14:38.99:0,39,349	0/0:24,0:24:57:0,57,512	0/0:22,0:23:43.88:0,44,366	0/0:20,0:20:27.89:0,28,326	0/0:11,0:11:20.22:0,20,171	0/0:22,4:26:19.29:0,19,428	0/0:7,0:38:52.95:0,53,156	1/1:2,19:21:45.13:521,45,0	0/0:39,2:41:73.05:0,73,884	0/0:19,0:19:47.97:0,48,428	1/1:1,8:9:24.07:278,24,0	1/1:3,9:12:17.88:160,18,0	1/1:5,32:37:35.58:616,36,0	0/0:28,0:28:61.52:0,62,551	0/0:21,0:21:51.88:0,52,455	0/0:36,0:36:84.01:0,84,763	0/0:26,0:26:59.97:0,60,535	1/1:2,14:16:39.06:425,39,0	1/1:3,12:15:21.03:243,21,0	1/1:0,2:2:3.01:35,3,0
chr10	100790861	.	G	GT	1270.25	PASS	AB=0.949;AC=9;AF=0.161;AN=56;BaseQRankSum=8.640;DP=535;FS=86.198;HRun=1;HaplotypeScore=108.4169;InbreedingCoeff=0.0474;MQ=58.89;MQ0=0;MQRankSum=-8.393;QD=10.08;ReadPosRankSum=-2.701;VQSLOD=-0.3648;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.22:0,69,896	0/0:8,0:8:24.08:0,24,312	0/0:10,0:8:21.05:0,21,251	0/0:10,0:10:6.86:0,7,154	0/0:27,0:27:81.25:0,81,1035	0/0:18,0:18:54.18:0,54,701	0/0:15,0:15:45.15:0,45,584	0/1:13,4:17:99:285,0,172	0/0:21,0:21:63.20:0,63,817	0/0:17,0:17:45.15:0,45,584	0/0:26,0:26:78.25:0,78,1013	0/0:23,0:23:69.19:0,69,876	0/0:30,0:30:90.28:0,90,1154	0/0:24,0:24:72.23:0,72,933	0/0:29,0:29:87.28:0,87,1129	0/1:21,0:21:20.04:239,0,20	0/0:19,0:19:54.15:0,54,684	0/0:20,0:20:54.17:0,54,698	0/1:4,1:5:63.43:63,0,65	1/1:19,0:19:8.62:201,9,0	0/1:11,0:11:14.84:214,0,15	0/0:21,0:21:57.18:0,57,740	0/0:23,0:23:66.21:0,66,856	0/0:28,0:28:84.25:0,84,1074	0/0:16,0:16:48.16:0,48,623	0/1:19,0:19:99:175,0,381	0/1:23,0:23:99:139,0,157	0/1:11,0:11:75.34:97,0,75
chr10	100792682	.	C	CA	1463.50	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.940;DP=732;FS=0.525;HRun=5;HaplotypeScore=103.3342;InbreedingCoeff=0.9954;MQ=87.59;MQ0=0;MQRankSum=-1.477;QD=29.27;ReadPosRankSum=-0.760;VQSLOD=3.0083;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:58.46:0,58,362	1/1:1,15:16:36.12:468,36,0	0/0:33,0:33:87.07:0,87,893	0/0:19,0:19:33.07:0,33,346	0/0:37,0:37:99:0,108,1151	0/0:31,0:31:78.18:0,78,831	0/0:35,0:35:93.19:0,93,982	0/0:28,0:28:38.68:0,39,240	0/0:20,0:20:60.07:0,60,629	0/0:26,0:25:66.16:0,66,709	0/0:21,0:21:49.16:0,49,622	0/0:33,0:33:84.21:0,84,409	0/0:24,0:24:69.15:0,69,732	0/0:26,0:26:57.02:0,57,303	1/1:2,32:34:76.27:1117,76,0	0/0:32,0:32:29.18:0,29,271	0/0:27,0:27:75.19:0,75,806	0/0:14,0:14:39.10:0,39,419	0/0:26,0:26:36.94:0,37,232	0/0:26,0:26:39.32:0,39,262	0/0:36,0:36:83:0,83,416	0/0:27,0:27:72.90:0,73,347	0/0:16,0:16:20.17:0,20,185	0/0:18,0:18:47.97:0,48,236	0/0:18,0:18:51.11:0,51,534	0/0:34,0:34:88.85:0,89,403	0/0:31,0:31:56.58:0,57,348	0/0:8,0:8:22.86:0,23,116
chr10	100792866	.	ATGTG	A	999.69	PASS	AB=0.964;AC=14;AF=0.250;AN=56;BaseQRankSum=6.237;DP=515;FS=6.477;HRun=0;HaplotypeScore=103.5523;InbreedingCoeff=0.7338;MQ=66.26;MQ0=3;MQRankSum=-3.933;QD=5.95;ReadPosRankSum=1.644;VQSLOD=0.9913;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,21:33:20.81:348,21,0	0/0:2,0:7:12.04:0,12,212	0/1:45,0:28:6.70:7,0,613	0/0:37,0:23:34.09:0,34,757	0/0:16,0:17:32.88:0,33,574	0/0:14,0:14:36.12:0,36,872	0/0:21,0:21:56.93:0,57,1365	0/0:28,0:28:57.18:0,57,1228	0/0:16,0:16:39.12:0,39,869	0/0:18,0:19:41.93:0,42,947	0/0:13,0:13:33.11:0,33,735	1/1:2,13:15:12.01:152,12,0	0/0:14,0:14:30.08:0,30,607	1/1:4,10:14:12.04:203,12,0	0/0:5,0:24:54.15:0,54,886	0/0:20,0:20:45.12:0,45,1044	0/0:6,0:7:20.59:0,21,399	0/0:9,0:9:21.07:0,21,522	0/1:18,1:19:17.77:18,0,633	0/0:12,0:13:32.83:0,33,646	0/0:25,0:28:71.78:0,72,1515	1/1:3,10:14:20.81:230,21,0	1/1:3,5:8:2.92:17,3,0	1/1:2,17:19:11.97:203,12,0	0/0:11,0:11:24.08:0,24,575	0/0:15,0:16:38.90:0,39,802	0/0:20,0:24:50.75:0,51,1100	0/0:7,0:6:3.01:0,3,75
chr10	100795066	.	CAGAA	C	11106.03	PASS	AB=0.548;AC=31;AF=0.554;AN=56;BaseQRankSum=21.504;DP=645;FS=1.619;HRun=0;HaplotypeScore=189.0438;InbreedingCoeff=0.9255;MQ=80.21;MQ0=0;MQRankSum=-20.261;QD=34.07;ReadPosRankSum=2.383;VQSLOD=5.1498;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:57.09:684,57,0	1/1:0,12:12:36.11:456,36,0	0/0:16,0:16:45.14:0,45,1196	0/0:30,0:29:64.64:0,65,1994	0/0:38,0:38:99:0,114,3189	0/0:26,0:26:75.26:0,75,2112	0/0:20,0:20:60.21:0,60,1726	1/1:6,24:30:74.61:1002,75,0	0/0:23,0:23:69.22:0,69,1896	0/0:27,0:27:81.27:0,81,2231	0/0:27,0:27:81.26:0,81,2196	1/1:1,21:22:66.11:784,66,0	0/0:51,0:51:99:0,154,4347	1/1:2,20:22:63.11:742,63,0	1/1:2,20:22:66.02:768,66,0	1/1:0,20:20:60.19:746,60,0	0/0:27,0:27:81.28:0,81,2330	0/0:13,0:13:39.13:0,39,1130	1/1:1,11:12:36.08:491,36,0	1/1:0,34:36:99:1200,99,0	1/1:1,6:7:18.06:221,18,0	1/1:2,17:19:56.90:645,57,0	1/1:3,22:25:74.92:826,75,0	1/1:2,7:9:18.05:213,18,0	0/0:21,0:21:63.19:0,63,1762	0/1:4,19:23:94.57:700,0,95	1/1:2,28:30:90.28:1127,90,0	1/1:0,13:13:39.13:502,39,0
chr10	100795072	.	C	CT	8708.87	PASS	AB=0.568;AC=31;AF=0.554;AN=56;BaseQRankSum=21.151;DP=693;FS=7.487;HRun=0;HaplotypeScore=176.7031;InbreedingCoeff=0.9355;MQ=76.58;MQ0=0;MQRankSum=-20.205;QD=22.74;ReadPosRankSum=-0.161;VQSLOD=4.3740;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,23:28:60.38:499,60,0	1/1:2,12:14:35.99:310,36,0	0/0:15,0:15:42.10:0,42,552	0/0:29,0:28:71.41:0,71,926	0/0:36,0:36:99:0,105,1449	0/0:25,0:25:75.22:0,75,1013	0/0:20,0:20:57.19:0,57,796	1/1:11,24:35:99:996,99,0	0/0:26,0:26:75.25:0,75,1047	0/0:24,0:24:72.22:0,72,972	0/0:23,0:23:69.22:0,69,947	1/1:4,21:25:69.82:596,70,0	0/0:48,0:48:99:0,144,2012	1/1:4,20:25:63.73:506,64,0	1/1:8,20:28:74.86:631,75,0	1/1:8,20:28:77.95:682,78,0	0/0:28,0:28:84.27:0,84,1157	0/0:15,0:15:45.12:0,45,593	1/1:6,11:17:51.04:503,51,0	1/1:6,34:40:96.34:793,96,0	1/1:6,6:12:29.99:278,30,0	1/1:5,17:22:50.88:407,51,0	1/1:4,22:26:72.20:573,72,0	1/1:4,7:11:20.94:166,21,0	0/0:21,0:21:63.21:0,63,881	0/1:6,19:25:8.75:562,0,9	1/1:2,28:30:89.93:781,90,0	1/1:3,13:16:48.01:426,48,0
chr10	100795620	.	AAG	A	6422.76	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.392;DP=711;FS=2.867;HRun=0;HaplotypeScore=85.1001;InbreedingCoeff=0.9991;MQ=82.24;MQ0=0;MQRankSum=-2.022;QD=36.49;ReadPosRankSum=4.649;VQSLOD=6.9835;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:72.24:1031,72,0	1/1:0,7:7:21.03:278,21,0	0/0:17,0:17:42.12:0,42,680	0/0:22,0:22:49.89:0,50,730	0/0:34,0:34:99:0,102,1739	0/0:33,0:33:93.30:0,93,1673	0/0:20,0:20:60.21:0,60,1100	0/0:32,0:32:90.31:0,90,1632	0/0:26,0:26:78:0,78,1386	0/0:37,0:37:99:0,108,1927	0/0:21,0:21:60.19:0,60,1047	1/1:1,17:18:45.15:645,45,0	0/0:23,0:23:69.22:0,69,1225	1/1:0,21:21:51.17:731,51,0	1/1:0,31:31:81.27:1160,81,0	0/0:26,0:26:75.24:0,75,1338	0/0:17,0:17:51.13:0,51,870	0/0:11,0:11:27.08:0,27,463	0/0:23,0:23:66.23:0,66,1206	0/0:41,0:41:99:0,120,2070	0/0:23,0:23:69.20:0,69,1174	1/1:1,21:22:57.19:817,57,0	1/1:2,27:29:72.24:1031,72,0	1/1:0,19:19:51.17:731,51,0	0/0:27,0:27:81.28:0,81,1483	0/0:45,0:45:99:0,132,2314	0/0:43,0:43:99:0,126,2261	0/0:14,0:14:42.14:0,42,769
chr10	100796023	.	TA	T	8045.12	PASS	AB=0.537;AC=31;AF=0.554;AN=56;BaseQRankSum=16.246;DP=625;FS=7.437;HRun=10;HaplotypeScore=86.3722;InbreedingCoeff=0.9249;MQ=72.78;MQ0=0;MQRankSum=-0.434;QD=21.40;ReadPosRankSum=4.103;VQSLOD=5.4689;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:74.98:651,75,0	1/1:2,11:13:23.99:208,24,0	0/0:10,0:10:17.95:0,18,168	0/0:8,0:8:6.07:0,6,43	0/0:26,1:27:49.15:0,49,770	0/0:17,0:17:43:0,43,467	0/0:21,0:21:31.08:0,31,553	1/1:3,18:21:50.79:434,51,0	0/0:20,1:21:31.09:0,31,562	0/0:39,0:39:99:0,102,1119	0/0:24,0:24:63.16:0,63,689	1/1:1,19:20:47.98:417,48,0	0/0:32,1:33:61.18:0,61,902	1/1:1,17:18:44.99:391,45,0	1/1:1,11:12:26.99:234,27,0	0/1:3,19:22:6.32:409,0,6	0/0:13,0:13:33.09:0,33,365	0/0:11,0:11:27.05:0,27,287	1/1:2,17:19:50.98:442,51,0	1/1:2,35:37:99:885,102,0	1/1:1,13:14:32.99:287,33,0	1/1:1,27:28:77.98:677,78,0	1/1:2,22:24:62.97:547,63,0	1/1:4,15:19:38.96:339,39,0	0/0:25,0:24:69.03:0,69,729	1/1:3,27:30:80.92:691,81,0	1/1:4,31:35:77.97:677,78,0	1/1:0,34:34:86.96:755,87,0
chr10	100798019	.	TTA	T	121.90	PASS	AB=0.846;AC=6;AF=0.273;AN=22;BaseQRankSum=2.517;DP=130;FS=1.448;HRun=0;HaplotypeScore=19.1363;InbreedingCoeff=-0.0570;MQ=85.41;MQ0=4;MQRankSum=0.517;QD=2.39;ReadPosRankSum=1.283;VQSLOD=0.8645;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:13,0:7:1.55:0,2,4	0/0:6,0:8:9.01:0,9,96	./.	./.	0/0:10,0:9:7.22:0,7,59	0/0:3,0:5:6:0,6,53	1/1:4,2:6:6.02:69,6,0	0/0:7,0:7:3:0,3,25	./.	0/1:5,2:7:37.46:60,0,37	./.	./.	./.	0/1:14,3:16:35.88:36,0,356	0/1:10,2:12:44.90:45,0,231	./.	./.	./.	./.	./.	./.	0/1:8,0:9:2.11:2,0,128	./.	0/0:4,0:4:1.25:0,1,3	./.
chr10	100798992	.	TC	T	1425.54	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=12.536;DP=627;FS=5.371;HRun=2;HaplotypeScore=84.9348;InbreedingCoeff=0.5316;MQ=64.30;MQ0=1;MQRankSum=-0.798;QD=6.99;ReadPosRankSum=2.653;VQSLOD=1.1171;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,1840	1/1:1,7:8:18.04:180,18,0	0/0:28,0:22:54.41:0,54,717	0/0:30,0:15:30.12:0,30,373	0/0:32,0:32:93.27:0,93,1308	0/0:22,0:22:63.17:0,63,903	0/0:17,0:17:51.15:0,51,724	0/1:32,0:32:84.94:85,0,100	0/0:14,0:14:37.04:0,37,553	0/0:31,0:31:93.20:0,93,1221	0/0:13,0:13:39.06:0,39,531	0/0:17,0:17:51.16:0,51,723	0/0:23,0:23:69.09:0,69,930	0/0:16,0:16:48.16:0,48,713	1/1:0,27:27:75.15:749,75,0	1/1:14,0:14:3.18:62,3,0	0/0:30,0:30:90.28:0,90,1300	0/0:17,0:17:51.17:0,51,760	0/1:13,0:13:34.20:34,0,37	0/1:29,0:29:26.49:109,0,26	0/1:34,0:34:3.42:132,0,3	0/0:23,0:23:69.11:0,69,921	0/0:20,0:20:60.20:0,60,884	0/0:19,0:19:54.15:0,54,747	0/0:27,0:27:81.26:0,81,1171	0/1:25,0:25:99:108,0,101	1/1:18,0:18:17.18:100,17,0	1/1:4,0:4:11.02:48,11,0
chr10	100798994	.	CG	C	4901.07	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=3.277;DP=625;FS=3.412;HRun=7;HaplotypeScore=76.4088;InbreedingCoeff=0.9840;MQ=66.20;MQ0=0;MQRankSum=0.338;QD=23.79;ReadPosRankSum=0.047;VQSLOD=4.9804;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,117,1430	1/1:7,0:7:18.04:180,18,0	0/0:25,0:22:58.78:0,59,633	0/0:28,0:15:30.12:0,30,316	0/0:32,0:32:90.23:0,90,1075	0/0:22,0:22:63.09:0,63,725	0/0:17,0:17:45.13:0,45,554	1/1:4,28:32:78.04:753,78,0	0/0:13,1:14:8.53:0,9,422	0/0:30,0:30:75.19:0,75,885	0/0:14,0:14:36.07:0,36,423	0/0:17,0:17:45.12:0,45,535	0/0:23,0:23:60.15:0,60,714	0/0:17,0:17:51.14:0,51,616	1/1:27,0:27:75.15:749,75,0	1/1:1,13:14:39.09:398,39,0	0/0:29,0:29:84.25:0,84,1042	0/0:17,0:17:51.15:0,51,628	1/1:3,10:13:29.62:271,30,0	1/1:4,27:31:74.24:671,74,0	1/1:2,31:33:75.17:764,75,0	0/0:22,0:22:57.16:0,57,681	0/0:21,0:21:63.16:0,63,741	0/0:20,0:20:51.14:0,51,607	0/0:27,0:27:75.23:0,75,930	1/1:5,20:25:22.40:536,22,0	1/1:1,19:20:45.09:458,45,0	1/1:0,4:4:12.03:122,12,0
chr10	100800036	.	G	GA	4397.65	PASS	AB=0.857;AC=21;AF=0.375;AN=56;BaseQRankSum=-7.957;DP=483;FS=1.198;HRun=9;HaplotypeScore=53.4789;InbreedingCoeff=0.8937;MQ=73.26;MQ0=0;MQRankSum=0.371;QD=22.67;ReadPosRankSum=-1.054;VQSLOD=5.2088;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:26.98:0,27,234	1/1:1,0:8:17.04:85,17,0	0/0:16,0:16:35.94:0,36,304	0/0:2,0:2:3:0,3,26	0/0:30,0:30:77.93:0,78,669	0/0:15,0:15:41.99:0,42,365	0/1:5,1:6:15.18:15,0,112	1/1:10,22:32:41.32:653,41,0	0/0:11,0:11:23.97:0,24,204	0/0:21,0:23:57.57:0,58,478	0/0:26,0:26:77.97:0,78,674	0/0:12,0:12:29.98:0,30,260	0/0:14,0:14:35.99:0,36,313	0/0:15,0:15:38.98:0,39,338	1/1:4,0:19:45.20:232,45,0	1/1:1,9:10:21.06:232,21,0	0/0:26,0:26:65.95:0,66,567	0/0:13,0:13:29.99:0,30,260	1/1:3,18:21:54.15:597,54,0	1/1:2,26:29:69.02:744,69,0	1/1:0,7:7:18.05:199,18,0	0/0:18,0:18:50.99:0,51,443	0/0:27,0:27:72.45:0,72,626	0/0:6,0:6:18:0,18,156	0/0:21,0:21:62.96:0,63,542	1/1:2,21:24:42.92:663,43,0	1/1:4,28:32:32.11:811,32,0	1/1:1,5:6:15.04:166,15,0
chr10	100800126	.	AGATTAAT	A	1884.69	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.836;DP=556;FS=6.499;HRun=0;HaplotypeScore=124.8816;InbreedingCoeff=0.9812;MQ=73.20;MQ0=0;MQRankSum=-7.386;QD=57.11;ReadPosRankSum=0.385;VQSLOD=3.4504;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:33.11:0,33,1351	1/1:0,6:6:12.04:323,12,0	0/0:13,0:13:33.11:0,33,1077	0/0:8,0:8:24.08:0,24,882	0/0:33,0:33:99:0,99,3702	0/0:24,0:24:72.25:0,72,2847	0/0:9,0:9:27.08:0,27,1006	0/0:38,0:38:99:0,108,4044	0/0:17,0:17:51.18:0,51,1907	0/0:33,0:33:93.30:0,93,3512	0/0:35,0:35:99:0,105,4027	0/0:15,0:15:45.15:0,45,1842	0/0:15,0:15:45.15:0,45,1689	0/0:21,0:21:63.22:0,63,2483	1/1:6,21:27:66.23:1678,66,0	0/0:19,0:19:54.19:0,54,2159	0/0:21,0:21:60.21:0,60,2199	0/0:10,0:10:30.10:0,30,1179	0/0:23,0:23:66.22:0,66,2404	0/0:34,0:34:99:0,102,4040	0/0:20,0:20:60.21:0,60,2372	0/0:11,0:11:33.11:0,33,1352	0/0:17,0:17:48.15:0,48,1768	0/0:15,0:15:45.15:0,45,1767	0/0:21,0:21:63.22:0,63,2434	0/0:29,0:29:87.30:0,87,3464	0/0:20,0:20:57.20:0,57,2227	0/0:10,0:10:27.09:0,27,1106
chr10	100801354	.	T	TTCTCTCTCTCTCTCTCTC	8437.61	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=6.206;DP=678;FS=3.158;HRun=0;HaplotypeScore=302.3775;InbreedingCoeff=0.7778;MQ=52.87;MQ0=11;MQRankSum=-7.418;QD=22.62;ReadPosRankSum=-3.949;VQSLOD=2.9203;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:16:18.06:413,18,0	1/1:10,0:9:3.01:56,3,0	0/0:49,0:23:18:0,18,195	0/0:52,0:25:4.11:0,4,242	0/0:16,0:19:35.76:0,36,825	0/0:18,0:18:36.12:0,36,1488	0/0:19,0:22:38.92:0,39,1375	1/1:47,0:46:48.16:1551,48,0	0/0:24,0:25:45.15:0,45,1623	0/0:19,0:20:26.91:0,27,970	0/0:15,0:16:21.07:0,21,777	1/1:19,0:19:21:437,21,0	0/0:21,0:21:39.13:0,39,1687	1/1:21,0:20:20.51:400,21,0	1/1:15,21:41:14.65:574,15,0	1/1:33,0:32:18.04:815,18,0	0/0:17,0:18:30.10:0,30,1113	0/1:9,0:9:70.49:70,0,501	1/1:20,0:18:39.12:1355,39,0	1/1:26,0:23:9.45:204,9,0	1/1:25,0:23:3:25,3,0	1/1:21,0:18:2.60:10,3,0	1/1:17,0:15:5.70:136,6,0	0/0:24,0:24:0.16:0,0,0	0/0:18,0:19:36.11:0,36,1454	1/1:19,0:17:16.60:292,17,0	1/1:28,0:28:30.07:1457,30,0	1/1:19,0:14:17.27:640,17,0
chr10	100801356	.	C	CGT	2252.17	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.620;DP=676;FS=0.484;HRun=0;HaplotypeScore=163.8988;InbreedingCoeff=0.9922;MQ=52.75;MQ0=11;MQRankSum=-2.920;QD=18.93;ReadPosRankSum=-2.020;VQSLOD=2.9728;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,3:17:20.52:304,21,0	0/0:9,0:8:12.92:0,13,161	0/0:48,0:22:53.87:0,54,901	0/0:51,0:24:24.24:0,24,555	0/0:18,0:18:51.11:0,51,758	0/0:20,0:20:57.18:0,57,887	0/0:24,0:22:57.08:0,57,801	0/0:45,0:44:99:0,108,1433	0/0:25,0:25:72.20:0,72,1085	0/0:20,0:20:57.14:0,57,845	0/0:16,0:16:39.10:0,39,575	1/1:9,8:17:23.12:383,23,0	0/0:22,0:22:63.21:0,63,1000	1/1:12,10:21:30.57:368,31,0	0/0:42,0:42:35.82:0,36,451	0/0:33,0:32:41.09:0,41,518	0/0:19,0:19:48.13:0,48,728	0/0:9,0:9:27.07:0,27,390	0/0:20,0:18:47.42:0,47,489	0/0:25,0:22:40.57:0,41,568	0/0:24,0:22:35.97:0,36,503	1/1:17,4:18:33.10:491,33,0	1/1:11,6:15:30.04:356,30,0	1/1:14,9:23:36.59:539,37,0	0/0:19,0:19:54.15:0,54,830	0/0:19,0:17:39.79:0,40,545	0/0:28,0:28:49.69:0,50,500	0/0:20,0:15:26.53:0,27,330
chr10	100801381	.	TTC	T	1075.19	PASS	AB=0.747;AC=12;AF=0.214;AN=56;BaseQRankSum=9.450;DP=590;FS=5.056;HRun=0;HaplotypeScore=123.8176;InbreedingCoeff=-0.2909;MQ=49.33;MQ0=19;MQRankSum=-4.622;QD=4.54;ReadPosRankSum=-0.994;VQSLOD=2.1425;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,6:23:55.05:139,0,55	0/1:7,1:7:6.62:7,0,117	0/0:32,1:8:21.06:0,21,267	0/0:58,0:21:27.33:0,27,539	0/0:16,0:16:44.83:0,45,677	0/0:19,0:19:57.19:0,57,1062	0/0:27,2:27:17.47:0,17,1072	0/1:18,9:26:99:223,0,585	0/0:26,0:26:78.11:0,78,1344	0/0:18,0:18:45.08:0,45,877	0/0:13,0:13:32.59:0,33,550	0/1:10,4:14:57.72:186,0,58	0/0:20,0:20:57.19:0,57,1073	0/1:9,11:20:37.67:112,0,38	0/0:30,0:29:18.01:0,18,705	0/1:15,12:28:23.07:23,0,673	0/0:15,0:15:42.06:0,42,731	0/0:9,0:9:26.88:0,27,424	0/1:18,5:21:99:172,0,630	0/1:8,8:13:73.84:74,0,245	0/0:15,0:14:1.51:0,2,297	0/0:12,5:14:8.17:0,8,175	0/1:10,8:15:9.83:10,0,33	0/0:12,8:20:3.48:0,3,40	0/0:15,0:14:42.01:0,42,727	0/1:7,7:12:91.53:92,0,247	0/1:15,13:28:99:115,0,601	0/1:9,2:8:70.78:71,0,158
chr10	100802725	.	A	AT	6511.43	PASS	AB=0.667;AC=31;AF=0.554;AN=56;BaseQRankSum=-11.060;DP=424;FS=12.412;HRun=9;HaplotypeScore=42.3363;InbreedingCoeff=0.9164;MQ=73.44;MQ0=0;MQRankSum=0.673;QD=27.02;ReadPosRankSum=0.290;VQSLOD=4.2126;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,12:13:33.09:365,33,0	1/1:0,6:6:18.05:199,18,0	0/0:9,0:9:23.94:0,24,199	0/0:7,0:7:20.96:0,21,175	0/0:22,0:22:56.98:0,57,495	0/0:27,0:28:77.01:0,77,657	0/0:7,0:7:14.99:0,15,130	1/1:10,21:31:63.17:697,63,0	0/0:12,0:12:35.99:0,36,313	0/0:18,0:18:47.98:0,48,415	0/0:14,0:14:35.97:0,36,309	1/1:0,12:12:33.09:365,33,0	0/0:17,0:17:44.96:0,45,386	1/1:2,12:14:13.05:371,13,0	1/1:0,14:14:39.11:431,39,0	1/1:4,10:14:30.08:332,30,0	0/0:15,0:15:32.44:0,32,307	0/0:21,0:21:50.94:0,51,436	1/1:4,18:22:34.20:570,34,0	1/1:1,20:21:57.11:617,57,0	1/1:0,5:5:15.04:166,15,0	0/1:6,6:12:27.96:175,0,28	1/1:0,18:18:54.15:597,54,0	1/1:1,6:7:18.05:199,18,0	0/0:12,0:13:35.03:0,35,293	1/1:2,8:10:24.06:265,24,0	1/1:4,21:25:57.15:630,57,0	1/1:1,16:17:48.13:531,48,0
chr10	100803348	.	CT	C	918.07	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.434;DP=586;FS=3.162;HRun=7;HaplotypeScore=58.5546;InbreedingCoeff=0.9954;MQ=71.00;MQ0=0;MQRankSum=-2.418;QD=21.35;ReadPosRankSum=0.591;VQSLOD=3.3690;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.24:0,81,1003	1/1:0,15:15:36.08:366,36,0	0/0:20,0:20:21.13:0,21,514	0/0:13,0:13:36.08:0,36,421	0/0:35,0:35:99:0,102,1258	0/0:21,0:21:54.17:0,54,679	0/0:11,0:11:30.10:0,30,377	0/0:30,0:30:81.25:0,81,1008	0/0:17,0:17:48.15:0,48,603	0/0:28,0:28:72.22:0,72,895	0/0:29,0:29:81.26:0,81,1018	0/0:16,0:16:45.14:0,45,566	0/0:20,0:20:57.17:0,57,705	0/0:18,0:18:51.13:0,51,606	1/1:0,28:28:66.15:673,66,0	0/0:22,0:22:57.18:0,57,716	0/0:23,0:23:66.21:0,66,830	0/0:12,0:12:36.12:0,36,452	0/0:19,0:19:54.15:0,54,664	0/0:20,0:20:51.15:0,51,629	0/0:8,0:8:21.07:0,21,264	0/0:22,0:22:60.17:0,60,739	0/0:26,0:26:66.20:0,66,817	0/0:17,0:17:48.15:0,48,603	0/0:27,0:27:78.24:0,78,964	0/0:21,0:21:63.20:0,63,792	0/0:22,0:22:66.20:0,66,817	0/0:16,0:16:42.13:0,42,528
chr10	100803529	.	G	GCACACACA	3785.12	PASS	AB=0.974;AC=34;AF=0.654;AN=52;BaseQRankSum=2.236;DP=615;FS=8.422;HRun=0;HaplotypeScore=167.2227;InbreedingCoeff=0.5572;MQ=61.09;MQ0=23;MQRankSum=-5.093;QD=10.37;ReadPosRankSum=-1.618;VQSLOD=1.4637;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,9:38:5.99:244,6,0	1/1:10,0:10:0.55:1,1,0	./.	./.	0/0:21,0:23:12.82:0,13,262	0/0:15,0:14:9.03:0,9,224	0/0:26,0:26:36.08:0,36,670	1/1:28,0:26:23.26:342,23,0	0/0:16,0:15:8.92:0,9,166	1/1:13,0:12:1.72:5,2,0	0/0:13,0:13:12.02:0,12,239	1/1:10,6:18:0.67:118,1,0	0/0:25,0:25:36.10:0,36,788	1/1:13,7:21:3.01:122,3,0	1/1:25,1:28:18.06:642,18,0	1/1:24,0:25:18.71:352,19,0	0/0:27,0:27:13.73:0,14,861	0/1:17,0:18:32.50:33,0,259	1/1:18,0:16:9:101,9,0	1/1:14,0:13:2.13:286,2,0	1/1:27,0:24:3.48:43,3,0	1/1:15,0:13:8.77:314,9,0	1/1:9,0:9:6.02:137,6,0	1/1:31,2:31:20.89:422,21,0	0/0:20,0:20:14.53:0,15,299	0/1:17,0:16:45.69:258,0,46	1/1:21,0:21:13.59:279,14,0	1/1:2,0:2:3.01:87,3,0
chr10	100803549	.	A	ACA	962.61	PASS	AB=0.944;AC=34;AF=0.654;AN=52;BaseQRankSum=4.582;DP=642;FS=11.269;HRun=0;HaplotypeScore=122.9737;InbreedingCoeff=0.4920;MQ=48.38;MQ0=25;MQRankSum=-4.015;QD=2.23;ReadPosRankSum=-4.477;VQSLOD=0.0684;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:39:5.98:48,6,0	./.	0/1:31,0:10:0:0,0,0	./.	0/0:23,0:23:11.43:0,11,93	0/0:13,0:12:9.02:0,9,99	0/0:28,0:28:36.05:0,36,371	1/1:34,0:32:10.94:54,11,0	0/1:15,5:20:34.78:35,0,57	1/1:21,0:20:0.94:1,1,0	0/0:13,0:13:12.01:0,12,121	1/1:19,0:19:3:26,3,0	0/0:25,0:25:36.08:0,36,384	1/1:24,0:23:3:26,3,0	1/1:29,0:26:17.99:153,18,0	1/1:23,0:22:10.38:101,10,0	0/0:33,0:32:38.77:0,39,389	0/1:25,0:24:38.80:39,0,111	1/1:19,0:17:2.50:7,2,0	1/1:16,0:13:10.07:98,10,0	1/1:26,0:21:1.66:4,2,0	1/1:15,0:13:6.87:62,7,0	1/1:7,0:7:4.25:29,4,0	1/1:32,0:30:17.65:151,18,0	0/0:19,0:19:14.86:0,15,146	0/1:24,0:23:10.99:126,0,11	1/1:22,0:20:16.25:150,16,0	1/1:2,0:2:3:25,3,0
chr10	100803587	.	GATAGATCAGCCTAGCTA	G	7866.65	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.385;DP=514;FS=0.486;HRun=0;HaplotypeScore=239.4452;InbreedingCoeff=0.9704;MQ=84.39;MQ0=5;MQRankSum=-7.439;QD=69.62;ReadPosRankSum=-0.063;VQSLOD=4.3916;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:72.25:0,72,5150	0/0:7,0:7:21.07:0,21,1609	0/0:20,0:18:48.14:0,48,2711	0/0:39,0:38:78.57:0,79,5484	0/0:21,0:21:57.19:0,57,4049	0/0:19,0:19:57.20:0,57,4166	0/0:33,0:33:87.28:0,87,6167	1/1:4,14:18:42.04:907,42,0	0/0:16,0:16:45.15:0,45,3555	0/0:16,0:15:45.14:0,45,2881	0/0:14,0:14:39.13:0,39,3010	0/0:13,0:13:33.11:0,33,2427	0/0:22,0:22:63.22:0,63,4770	0/0:18,0:17:48.16:0,48,3816	0/0:24,0:21:35.91:0,36,2839	1/1:1,9:10:21.07:1034,21,0	0/0:30,0:30:87.30:0,87,6400	0/0:19,0:19:51.18:0,51,4018	1/1:5,17:22:50.62:1377,51,0	1/1:4,11:14:16.43:878,16,0	1/1:7,3:9:12.04:486,12,0	0/0:13,0:12:33.11:0,33,2429	0/0:6,0:6:15.05:0,15,1249	0/0:26,0:25:57.19:0,57,4216	0/0:14,0:14:39.12:0,39,2492	1/1:1,18:19:53.94:1895,54,0	1/1:2,15:17:21.54:995,22,0	1/1:0,2:2:6.02:295,6,0
chr10	100803627	.	C	CA	1003.07	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.405;DP=593;FS=5.275;HRun=3;HaplotypeScore=108.8722;InbreedingCoeff=0.9449;MQ=88.24;MQ0=0;MQRankSum=0.318;QD=33.44;ReadPosRankSum=2.252;VQSLOD=3.4908;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,1719	1/1:0,8:8:24.08:360,24,0	0/0:20,0:20:54.16:0,54,688	0/0:28,0:28:77.68:0,78,934	0/0:21,0:21:63.20:0,63,818	0/0:24,0:24:72.22:0,72,920	0/0:31,0:31:87.27:0,87,1113	0/0:21,0:21:60.19:0,60,774	0/0:32,0:32:90.29:0,90,1167	0/0:19,0:18:54.18:0,54,701	0/0:21,0:21:63.18:0,63,802	0/0:18,0:18:54.18:0,54,701	0/0:25,0:25:69.22:0,69,895	0/0:23,0:23:60.19:0,60,778	1/1:2,20:22:51.17:764,51,0	0/0:20,0:20:54.17:0,54,692	0/0:26,0:26:78.23:0,78,997	0/0:22,0:22:60.20:0,60,779	0/0:18,0:18:54.14:0,54,683	0/0:11,0:11:21.07:0,21,272	0/0:19,0:19:45.15:0,45,579	0/0:10,0:10:27.09:0,27,350	0/0:11,0:11:33.11:0,33,428	0/0:30,0:30:78.25:0,78,999	0/0:19,0:19:57.19:0,57,740	0/0:22,0:22:60.15:0,60,758	0/0:23,0:23:42.12:0,42,542	0/0:2,0:2:6.02:0,6,78
chr10	100803713	.	AACACAC	A	820.69	PASS	AB=0.817;AC=16;AF=0.296;AN=54;BaseQRankSum=6.325;DP=457;FS=0.840;HRun=0;HaplotypeScore=109.9434;InbreedingCoeff=0.6774;MQ=62.53;MQ0=13;MQRankSum=-3.201;QD=6.46;ReadPosRankSum=1.990;VQSLOD=2.1397;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,2:25:16.11:171,16,0	0/1:10,0:12:1.81:42,0,2	./.	0/0:38,0:21:6.01:0,6,61	0/0:11,0:11:5.59:0,6,121	0/0:13,0:13:17.97:0,18,322	0/0:17,0:17:15:0,15,267	0/0:20,0:20:8.93:0,9,63	0/0:21,0:21:15.05:0,15,467	0/0:16,0:16:32.14:0,32,870	0/0:10,0:10:15.03:0,15,405	1/1:2,1:4:5.99:63,6,0	0/0:12,0:12:11.87:0,12,285	1/1:4,7:11:5.98:81,6,0	1/1:4,0:8:12:131,12,0	0/0:11,0:13:5.95:0,6,56	0/0:28,0:28:45.44:0,45,957	0/0:15,0:14:15.01:0,15,348	0/0:13,0:14:14.14:0,14,283	0/0:10,0:10:24.06:0,24,534	0/0:22,0:31:7.51:0,8,80	1/1:5,6:12:11.71:173,12,0	1/1:5,9:14:9.09:120,9,0	1/1:24,2:27:11.88:170,12,0	0/0:9,0:11:15.05:0,15,304	0/1:10,1:13:47.53:48,0,76	0/0:15,0:16:18.06:0,18,479	0/0:6,0:8:0.71:0,1,2
chr10	100804034	.	GA	G	3674.95	PASS	AB=0.762;AC=20;AF=0.357;AN=56;BaseQRankSum=11.049;DP=468;FS=0.792;HRun=10;HaplotypeScore=49.3606;InbreedingCoeff=0.8196;MQ=75.43;MQ0=0;MQRankSum=0.820;QD=19.24;ReadPosRankSum=-1.077;VQSLOD=3.9108;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1109	1/1:1,5:6:15:130,15,0	0/0:15,0:15:26.24:0,26,248	0/1:16,0:16:22.95:23,0,99	0/0:12,1:13:1.02:0,1,239	0/0:12,0:12:36.07:0,36,382	0/0:24,0:24:60.16:0,60,663	1/1:6,24:31:73.96:619,74,0	0/0:13,0:13:39.10:0,39,424	0/0:19,0:19:51.12:0,51,551	0/0:13,0:14:35.93:0,36,379	0/0:20,0:20:54.10:0,54,571	0/0:16,0:16:42.10:0,42,456	0/0:21,0:21:54.12:0,54,581	1/1:1,13:14:35.99:313,36,0	1/1:1,14:15:11.81:331,12,0	0/0:21,0:21:60.16:0,60,664	0/0:14,0:14:42.11:0,42,465	1/1:3,25:28:74.89:635,75,0	1/1:1,14:15:38.98:338,39,0	1/1:3,15:18:41.99:365,42,0	0/0:6,0:6:15.04:0,15,166	0/0:5,0:5:9.02:0,9,99	0/0:14,0:14:33.08:0,33,358	0/0:13,0:13:39.09:0,39,416	1/1:3,17:20:20.77:404,21,0	1/1:3,14:17:35.99:313,36,0	0/1:1,10:11:3.18:204,0,3
chr10	100806937	.	TACTCAAAGGATGA	T	1936.46	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.670;DP=575;FS=18.673;HRun=0;HaplotypeScore=200.9550;InbreedingCoeff=0.9958;MQ=55.65;MQ0=3;MQRankSum=-6.789;QD=92.21;ReadPosRankSum=2.279;VQSLOD=1.9752;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.30:0,87,5044	1/1:0,11:11:30.10:1210,30,0	0/0:13,0:9:24.08:0,24,1560	0/0:20,0:16:45.15:0,45,2593	0/0:30,0:29:87.30:0,87,5108	0/0:16,0:16:48.16:0,48,3096	0/0:11,0:11:33.10:0,33,1824	0/0:39,0:39:99:0,108,6159	0/0:26,0:26:75.26:0,75,4887	0/0:35,0:35:99:0,102,6175	0/0:20,0:20:54.19:0,54,3417	0/0:16,0:16:48.16:0,48,3097	0/0:25,0:25:75.26:0,75,4730	0/0:20,0:20:60.21:0,60,3912	1/1:3,7:10:21.07:847,21,0	0/0:20,0:20:60.21:0,60,3834	0/0:20,0:20:57.18:0,57,3182	0/0:13,0:13:36.12:0,36,2191	0/0:21,0:16:48.16:0,48,3058	0/0:33,0:33:96.32:0,96,5984	0/0:14,0:14:42.14:0,42,2375	0/0:9,0:9:27.09:0,27,1792	0/0:22,0:22:66.21:0,66,4047	0/0:16,0:16:45.15:0,45,2921	0/0:25,0:23:66.23:0,66,3948	0/0:21,0:21:63.22:0,63,3872	0/0:26,0:26:78.27:0,78,4980	0/0:13,0:13:39.13:0,39,2589
chr10	100807863	.	CCACACACACACACACACCCACA	C	1250.15	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=1.652;DP=480;FS=41.368;HRun=0;HaplotypeScore=201.0352;InbreedingCoeff=0.8795;MQ=56.45;MQ0=68;MQRankSum=1.655;QD=8.50;ReadPosRankSum=1.306;VQSLOD=0.9003;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:20:29.90:0,30,1053	0/0:7,0:7:18:0,18,212	0/0:23,0:16:10.44:0,10,85	0/1:24,0:15:0:0,0,0	0/0:19,0:16:35.99:0,36,980	0/0:16,0:16:36.07:0,36,1807	0/0:20,0:15:24.04:0,24,664	1/1:23,0:18:23.93:198,24,0	0/0:16,0:14:28.74:0,29,996	0/0:27,0:18:26.77:0,27,1208	0/0:17,0:16:22.80:0,23,1245	0/0:28,0:21:48.09:0,48,2172	0/0:11,0:9:12.02:0,12,546	0/0:18,0:16:27.18:0,27,976	0/0:14,0:12:30.02:0,30,619	1/1:16,2:16:28.06:622,28,0	0/0:14,0:12:21.02:0,21,846	0/0:9,0:5:12:0,12,277	1/1:9,8:10:23.97:243,24,0	1/1:14,0:11:2.94:18,3,0	1/1:17,0:10:11.95:94,12,0	0/0:18,0:17:33.04:0,33,993	0/0:16,0:13:23.73:0,24,1038	0/0:33,0:28:44.97:0,45,1161	0/0:4,0:3:6.02:0,6,389	1/1:11,0:11:11.94:91,12,0	1/1:13,0:9:8.98:73,9,0	1/1:9,0:9:11.98:102,12,0
chr10	100807881	.	C	CCA	399.92	PASS	AB=1.000;AC=13;AF=0.271;AN=48;BaseQRankSum=-0.089;DP=509;FS=13.534;HRun=0;HaplotypeScore=76.2756;InbreedingCoeff=0.1526;MQ=44.80;MQ0=120;MQRankSum=-0.240;QD=2.21;ReadPosRankSum=-0.007;VQSLOD=0.7164;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:20:12.30:95,0,12	1/1:10,0:10:0.89:2,1,0	./.	./.	0/0:25,0:19:14.80:0,15,128	0/0:19,0:16:14:0,14,87	0/0:17,0:12:2.99:0,3,24	./.	0/0:19,0:14:8.86:0,9,78	0/0:30,0:15:8.88:0,9,72	0/0:15,0:13:8.96:0,9,94	0/1:34,0:24:2.02:265,0,2	0/0:15,0:10:6.01:0,6,63	0/1:23,0:17:23.89:43,0,24	0/0:14,0:17:0.17:0,0,10	0/0:18,0:15:6.92:0,7,29	0/0:12,0:10:5.85:0,6,46	0/0:10,0:6:5.73:0,6,34	0/0:17,0:10:0.94:0,1,2	0/0:19,0:11:0:0,0,0	1/1:22,0:14:3:25,3,0	0/1:17,0:15:34.19:34,0,44	0/1:21,0:15:12.56:29,0,13	0/0:25,8:29:1.78:0,2,5	./.	1/1:16,0:11:0.94:2,1,0	0/0:16,0:11:3.27:0,3,7	1/1:14,0:12:2.99:24,3,0
chr10	100808549	.	C	CAAA	4598.14	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.806;DP=528;FS=21.850;HRun=9;HaplotypeScore=135.1496;InbreedingCoeff=0.9230;MQ=66.19;MQ0=5;MQRankSum=-10.672;QD=34.06;ReadPosRankSum=-4.495;VQSLOD=1.3218;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:15:36.09:0,36,455	1/1:2,4:7:21.01:338,21,0	0/0:46,0:23:0.73:0,1,295	0/0:38,0:20:10.65:0,11,182	0/0:26,0:26:66.17:0,66,824	0/0:18,0:18:48.08:0,48,576	0/0:17,0:16:39.08:0,39,476	1/1:10,8:16:35.97:519,36,0	0/0:15,0:15:29.96:0,30,379	0/0:22,0:22:54.12:0,54,671	0/0:23,0:23:30.98:0,31,630	0/0:6,0:6:12:0,12,152	0/0:13,0:13:33.08:0,33,417	0/0:15,0:15:36.07:0,36,432	1/1:9,6:14:30.02:439,30,0	1/1:4,4:7:18.06:339,18,0	0/0:31,0:31:69.19:0,69,872	0/0:20,0:19:26.68:0,27,534	1/1:8,4:13:31.30:482,31,0	1/1:11,19:30:63.08:1000,63,0	0/0:3,2:6:2.92:0,3,18	0/0:14,0:14:42.12:0,42,517	0/0:27,0:27:54.11:0,54,757	0/0:14,0:14:39.12:0,39,493	0/0:22,0:22:60.17:0,60,757	1/1:7,7:15:30.07:520,30,0	1/1:3,7:10:27.04:458,27,0	1/1:5,4:11:30.09:503,30,0
chr10	100808570	.	ACCCC	A	4838.85	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.309;DP=563;FS=22.127;HRun=7;HaplotypeScore=147.8373;InbreedingCoeff=0.9193;MQ=68.87;MQ0=10;MQRankSum=-12.038;QD=39.02;ReadPosRankSum=0.802;VQSLOD=1.7998;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:39.13:0,39,760	1/1:0,8:8:24.08:418,24,0	0/0:81,0:31:63.95:0,64,1346	0/0:66,0:21:0.02:0,0,468	0/0:26,0:26:72.24:0,72,1807	0/0:15,0:15:45.15:0,45,1194	0/0:16,0:18:45.15:0,45,1156	1/1:5,14:14:27.08:481,27,0	0/0:9,0:9:17.76:0,18,478	0/0:15,0:15:45.15:0,45,1199	0/0:23,0:23:60.19:0,60,1501	0/0:11,0:11:33.11:0,33,670	0/0:16,0:16:48.13:0,48,1208	0/0:13,0:13:27.09:0,27,495	1/1:2,11:12:33.09:545,33,0	1/1:0,9:7:21.07:372,21,0	0/0:30,0:30:78.24:0,78,1986	0/0:15,0:15:45.15:0,45,1184	1/1:3,13:15:3.91:552,4,0	1/1:2,20:22:63.22:1109,63,0	1/1:2,2:4:6.02:107,6,0	0/0:15,0:15:39.13:0,39,781	0/0:27,0:27:72.24:0,72,1396	0/0:18,0:18:48.09:0,48,866	0/0:21,0:21:60.21:0,60,1568	1/1:2,11:12:29.97:528,30,0	1/1:4,9:11:21.07:366,21,0	1/1:0,7:7:21.07:361,21,0
chr10	100808584	.	ACC	A	2445.09	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=13.791;DP=544;FS=15.629;HRun=2;HaplotypeScore=130.5634;InbreedingCoeff=0.9379;MQ=59.24;MQ0=12;MQRankSum=-11.746;QD=19.25;ReadPosRankSum=1.352;VQSLOD=0.3221;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.16:0,48,790	1/1:8,0:8:20.26:237,20,0	0/0:74,0:21:20.19:0,20,455	0/0:62,0:14:10.76:0,11,222	0/0:24,0:24:69.23:0,69,1249	0/0:16,0:16:48.16:0,48,843	0/0:21,0:20:51.17:0,51,901	1/1:25,4:17:42.54:369,43,0	0/0:8,0:8:20.91:0,21,379	0/0:14,0:14:42.14:0,42,746	0/0:22,0:22:63.19:0,63,1090	0/0:12,0:12:36.12:0,36,602	0/0:13,0:13:39.13:0,39,693	0/0:15,0:15:32.97:0,33,478	1/1:13,1:12:33.43:361,33,0	1/1:10,0:8:21.95:246,22,0	0/0:28,0:28:81.28:0,81,1422	0/0:14,0:14:42.14:0,42,762	1/1:13,0:11:4.12:179,4,0	1/1:23,0:23:56.66:620,57,0	0/1:4,0:4:0.19:0,0,0	0/0:14,0:14:39.12:0,39,662	0/0:23,0:23:60.08:0,60,1027	0/0:13,0:13:39.13:0,39,645	0/0:26,0:26:75.26:0,75,1348	1/1:9,1:9:23.99:263,24,0	1/1:10,0:8:21.07:198,21,0	1/1:5,1:6:15.52:177,16,0
chr10	100808597	.	AC	A	1662.34	PASS	AB=0.666;AC=15;AF=0.268;AN=56;BaseQRankSum=13.964;DP=522;FS=5.539;HRun=1;HaplotypeScore=125.6461;InbreedingCoeff=0.6736;MQ=54.00;MQ0=16;MQRankSum=-11.631;QD=12.05;ReadPosRankSum=1.312;VQSLOD=2.3502;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.15:0,45,674	1/1:0,7:7:20.90:159,21,0	0/0:54,4:14:23.06:0,23,231	0/0:52,2:15:15.82:0,16,243	0/0:22,0:22:63.21:0,63,962	0/0:12,0:12:36.05:0,36,522	0/0:17,0:17:48.08:0,48,653	0/1:20,18:29:90.92:310,0,91	0/0:11,0:11:27.09:0,27,403	0/0:19,0:19:50.90:0,51,708	0/0:18,0:18:51.17:0,51,779	0/0:12,0:12:30.06:0,30,454	0/0:13,0:13:39.13:0,39,595	0/0:14,0:14:30.10:0,30,452	1/1:5,12:15:4.64:211,5,0	0/1:6,8:12:10.84:141,0,11	0/0:22,0:22:66.21:0,66,986	0/0:16,0:16:48.11:0,48,685	0/1:7,6:11:46.54:132,0,47	1/1:5,16:21:46.75:419,47,0	0/0:4,0:4:1.90:0,2,7	0/0:17,0:16:41.88:0,42,601	0/0:21,0:21:56.18:0,56,806	0/0:10,0:9:27.09:0,27,413	0/0:28,0:28:78.22:0,78,1120	1/1:5,7:11:15.93:171,16,0	1/1:2,9:9:23.60:191,24,0	1/1:1,4:5:14.92:114,15,0
chr10	100808602	.	C	CAA	3012.05	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=2.445;DP=533;FS=0.952;HRun=8;HaplotypeScore=136.6061;InbreedingCoeff=0.5488;MQ=55.18;MQ0=16;MQRankSum=3.574;QD=16.19;ReadPosRankSum=-0.625;VQSLOD=0.9471;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:17:39.13:602,39,0	0/1:8,0:8:28.45:28,0,52	0/0:52,0:13:8.03:0,8,141	0/1:50,0:17:9.03:9,0,189	0/0:21,0:21:63.15:0,63,692	0/0:12,0:12:30.07:0,30,334	0/0:15,0:15:28.57:0,29,342	0/0:43,0:34:13.04:0,13,158	0/0:11,0:11:27.07:0,27,300	0/0:15,0:16:35.93:0,36,401	0/0:18,0:18:48.11:0,48,526	1/1:1,14:15:27.09:429,27,0	0/0:14,0:14:39.09:0,39,423	1/1:0,14:14:30.10:474,30,0	0/0:19,0:17:1.26:0,1,120	0/0:16,0:15:1.81:0,2,88	0/0:22,0:22:60.15:0,60,668	0/0:17,0:17:35.81:0,36,401	0/1:14,0:12:13.59:14,0,75	0/0:20,0:20:33.85:0,34,235	0/0:5,0:5:1.96:0,2,11	1/1:4,15:19:36.12:550,36,0	1/1:5,17:22:47.66:669,48,0	1/1:2,9:10:24.08:381,24,0	0/0:25,0:25:60.15:0,60,669	0/0:13,0:12:7.26:0,7,92	0/1:13,0:11:23.89:45,0,24	0/0:5,0:5:14.05:0,14,71
chr10	100808608	.	AAAC	A	2931.56	PASS	AB=0.759;AC=19;AF=0.339;AN=56;BaseQRankSum=10.247;DP=532;FS=7.151;HRun=0;HaplotypeScore=138.2737;InbreedingCoeff=0.9226;MQ=58.45;MQ0=12;MQRankSum=-10.654;QD=18.10;ReadPosRankSum=-2.943;VQSLOD=2.5969;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:56.45:0,56,744	1/1:1,7:8:24.02:246,24,0	0/0:47,0:12:22.12:0,22,355	0/0:49,0:20:32.07:0,32,582	0/0:22,0:22:66.16:0,66,1510	0/0:12,0:12:36.11:0,36,795	0/0:16,0:16:28.56:0,29,845	0/1:30,14:36:6.28:558,0,6	0/0:11,0:11:27.06:0,27,604	0/0:18,0:18:51.17:0,51,1061	0/0:20,0:20:60.14:0,60,1205	0/0:15,0:15:30.07:0,30,490	0/0:15,0:15:45.13:0,45,930	0/0:15,0:15:33.08:0,33,480	1/1:10,10:19:29.36:392,29,0	1/1:10,8:17:23.07:344,23,0	0/0:22,0:22:66.21:0,66,1458	0/0:15,0:15:45.07:0,45,924	1/1:10,5:14:14.83:286,15,0	1/1:7,14:21:55.21:549,55,0	1/1:6,0:6:10.93:81,11,0	0/0:18,0:17:45:0,45,616	0/0:21,0:21:56.97:0,57,790	0/0:11,0:10:27.09:0,27,454	0/0:22,0:22:60.21:0,60,1419	1/1:8,6:13:31.85:305,32,0	1/1:4,7:9:26.83:228,27,0	1/1:1,4:5:15.02:157,15,0
chr10	100810009	.	A	AC	132.23	PASS	AC=6;AF=0.200;AN=30;BaseQRankSum=1.340;DP=41;FS=0.000;HRun=6;HaplotypeScore=8.4392;InbreedingCoeff=0.4751;MQ=96.71;MQ0=1;MQRankSum=-1.423;QD=14.69;ReadPosRankSum=-1.134;VQSLOD=0.5340;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:9.01:97,9,0	./.	0/0:2,0:1:3.01:0,3,31	0/0:5,0:5:11.91:0,12,112	0/0:1,0:1:3.01:0,3,30	./.	0/0:2,0:2:6.01:0,6,61	./.	./.	./.	0/0:1,0:1:3.01:0,3,30	1/1:1,1:2:3.01:38,3,0	0/0:3,0:3:9.02:0,9,92	./.	./.	0/0:2,0:2:6.01:0,6,61	0/0:6,0:6:18.04:0,18,183	./.	./.	0/0:2,0:2:6.01:0,6,61	0/0:4,0:4:12.03:0,12,122	./.	./.	1/1:0,4:4:9.02:101,9,0	./.	0/0:1,0:1:3.01:0,3,31	0/0:1,0:1:3.01:0,3,31	./.
chr10	100810406	.	GTACATACA	G	7393.71	PASS	AB=0.748;AC=35;AF=0.700;AN=50;BaseQRankSum=-1.974;DP=683;FS=3.267;HRun=0;HaplotypeScore=192.3936;InbreedingCoeff=0.5565;MQ=64.92;MQ0=4;MQRankSum=-10.796;QD=16.04;ReadPosRankSum=0.704;VQSLOD=3.5317;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,5:33:6.07:127,6,0	1/1:5,7:12:12.04:296,12,0	./.	./.	0/0:16,0:34:41.94:0,42,404	1/1:16,10:26:18.06:367,18,0	1/1:17,5:22:9.03:139,9,0	./.	1/1:13,15:28:30.10:646,30,0	0/0:21,0:23:39.10:0,39,1261	0/0:25,0:25:51.17:0,51,1781	1/1:10,13:23:30.10:620,30,0	0/1:14,2:31:80.56:81,0,294	1/1:14,14:29:39.13:766,39,0	1/1:12,19:30:36.12:847,36,0	1/1:14,14:28:36.12:725,36,0	1/1:20,11:32:2.80:74,3,0	0/1:10,1:11:32.53:139,0,33	0/0:9,0:9:3.48:0,3,54	1/1:6,11:17:21.05:407,21,0	1/1:24,0:24:9.01:172,9,0	1/1:12,13:26:39.13:790,39,0	1/1:7,10:18:11.85:198,12,0	0/0:11,4:15:0:0,0,0	0/0:7,0:19:17.76:0,18,135	0/1:16,0:30:23.11:23,0,499	1/1:16,7:24:18.06:423,18,0	1/1:7,9:16:24.08:552,24,0
chr10	100810731	.	C	CTTT	5212.01	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=2.126;DP=443;FS=3.984;HRun=11;HaplotypeScore=71.7442;InbreedingCoeff=0.9479;MQ=73.01;MQ0=5;MQRankSum=-3.949;QD=24.13;ReadPosRankSum=-2.474;VQSLOD=3.2095;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:11:17.93:137,18,0	1/1:2,0:7:13.20:94,13,0	0/0:11,0:9:8.82:0,9,81	0/0:19,0:14:11.44:0,11,94	0/0:25,0:27:55.58:0,56,663	0/0:18,0:18:48.10:0,48,561	0/0:9,0:11:20.81:0,21,211	1/1:9,12:26:51.09:764,51,0	0/0:23,0:24:47.86:0,48,526	0/0:18,0:20:50.98:0,51,554	0/0:16,0:17:38.98:0,39,438	1/1:3,0:12:26.90:206,27,0	0/0:17,0:17:42.06:0,42,479	1/1:1,0:6:14.92:111,15,0	1/1:4,0:19:38.34:278,38,0	1/1:2,7:9:24.08:445,24,0	0/0:20,0:23:59.89:0,60,631	0/0:12,0:12:29.63:0,30,322	1/1:7,5:11:18.06:332,18,0	1/1:6,11:18:37.29:544,37,0	1/1:2,2:4:3.01:56,3,0	1/1:1,0:12:25.46:187,25,0	1/1:1,0:14:38.85:297,39,0	1/1:2,0:7:13.18:91,13,0	0/0:24,0:25:54.62:0,55,632	1/1:6,14:23:16.02:721,16,0	1/1:3,12:17:30.08:511,30,0	1/1:8,6:16:25.33:437,25,0
chr10	100810860	.	C	CA	939.37	PASS	AB=0.780;AC=21;AF=0.375;AN=56;BaseQRankSum=-0.068;DP=363;FS=1.959;HRun=15;HaplotypeScore=45.2492;InbreedingCoeff=0.1492;MQ=59.42;MQ0=6;MQRankSum=0.056;QD=4.84;ReadPosRankSum=-3.127;VQSLOD=0.6126;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:15:13.77:0,14,91	1/1:2,2:5:8.83:65,9,0	0/1:9,0:4:0:0,0,0	0/0:12,0:6:5.73:0,6,33	0/0:24,0:23:5.79:0,6,137	0/0:11,0:11:20.50:0,21,126	0/1:12,2:14:23.95:24,0,99	0/1:6,11:18:8.37:206,0,8	0/0:14,0:13:17.46:0,17,108	0/0:16,0:17:29.53:0,30,171	0/0:15,0:19:17.15:0,17,79	0/1:7,1:7:10.40:10,0,54	0/0:18,0:18:10.39:0,10,62	0/0:7,0:8:7.75:0,8,42	1/1:3,2:10:9.92:55,10,0	0/1:1,6:8:6.01:64,0,6	0/0:14,0:16:32.47:0,32,179	0/0:7,0:8:15.98:0,16,84	0/1:5,2:10:5.46:73,0,5	1/1:8,8:17:8.88:172,9,0	1/1:4,7:13:0.73:94,1,0	0/0:5,0:5:8.74:0,9,53	0/1:7,0:8:1.30:1,0,56	0/1:7,1:8:8.33:8,0,17	0/1:16,3:20:44.20:44,0,100	1/1:10,9:19:3.05:169,3,0	0/1:5,10:15:35.59:36,0,39	0/1:5,6:12:18.05:83,0,18
chr10	100815134	.	TTC	T	7511.73	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=13.744;DP=608;FS=13.240;HRun=0;HaplotypeScore=88.5694;InbreedingCoeff=0.9814;MQ=69.93;MQ0=1;MQRankSum=-1.288;QD=21.65;ReadPosRankSum=3.101;VQSLOD=4.8572;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:21:36.93:182,37,0	1/1:0,7:7:21.07:257,21,0	0/0:16,0:16:21.06:0,21,313	0/0:21,0:18:5.38:0,5,412	0/0:29,0:29:72.25:0,72,1168	0/0:25,0:25:66.23:0,66,1070	0/0:20,0:20:45.14:0,45,694	1/1:16,18:34:54.17:660,54,0	0/0:15,0:15:42.14:0,42,677	0/0:22,0:22:60.20:0,60,958	0/0:26,0:26:63.22:0,63,1016	1/1:2,0:12:22.73:112,23,0	0/0:29,0:29:60.19:0,60,949	1/1:1,0:15:22.73:112,23,0	1/1:8,23:31:60.19:733,60,0	1/1:3,20:23:57.18:697,57,0	0/0:26,0:26:39.41:0,39,925	0/0:12,0:12:27.06:0,27,411	1/1:7,15:22:45.14:550,45,0	1/1:4,25:29:72.18:863,72,0	1/1:6,12:18:36.11:440,36,0	1/1:3,0:17:34.09:168,34,0	1/1:0,0:19:51.13:251,51,0	1/1:3,0:21:51.13:252,51,0	0/0:20,0:20:54.18:0,54,876	1/1:7,24:30:72.23:880,72,0	1/1:5,27:31:75.23:917,75,0	1/1:3,12:14:36.11:440,36,0
chr10	100815457	.	CTTT	C	4130.16	PASS	AB=0.715;AC=19;AF=0.339;AN=56;BaseQRankSum=1.681;DP=497;FS=0.839;HRun=13;HaplotypeScore=85.5883;InbreedingCoeff=0.7845;MQ=70.18;MQ0=0;MQRankSum=-1.525;QD=22.95;ReadPosRankSum=2.211;VQSLOD=2.9338;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:16:32.90:0,33,260	0/1:2,9:12:6.23:195,0,6	0/1:12,0:8:4.31:4,0,95	0/0:12,0:12:10.75:0,11,165	0/0:17,0:20:58.38:0,58,980	0/0:30,0:33:81.24:0,81,1412	0/0:9,0:9:21.05:0,21,370	1/1:5,23:29:67.49:834,67,0	0/0:15,0:17:45.11:0,45,727	0/0:15,0:16:39.11:0,39,669	0/0:18,0:23:69.21:0,69,1150	0/0:4,0:17:35.25:0,35,260	0/0:13,0:14:27.05:0,27,467	0/0:5,0:23:45.79:0,46,369	1/1:1,17:19:43.46:544,43,0	1/1:4,17:22:51.04:597,51,0	0/0:26,0:29:72.20:0,72,1286	0/0:12,0:14:30.08:0,30,486	1/1:5,10:16:25.33:311,25,0	1/1:4,18:22:51.09:620,51,0	1/1:1,11:13:11.99:146,12,0	0/0:4,0:17:41.37:0,41,314	0/0:7,0:24:62.83:0,63,558	0/0:4,0:12:26.92:0,27,227	0/0:18,0:20:54.11:0,54,864	0/1:5,9:14:22.01:279,0,22	1/1:1,12:14:32.13:380,32,0	1/1:0,6:6:18.06:219,18,0
chr10	100816280	.	A	AT	3643.46	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.263;DP=688;FS=12.518;HRun=8;HaplotypeScore=63.9514;InbreedingCoeff=0.9858;MQ=70.43;MQ0=0;MQRankSum=0.175;QD=27.60;ReadPosRankSum=1.578;VQSLOD=3.5506;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:23:51.08:572,51,0	0/0:8,0:8:21.01:0,21,192	0/0:20,0:20:8.82:0,9,193	0/0:19,0:17:21.38:0,21,204	0/0:36,0:36:99:0,99,896	0/0:25,0:25:72:0,72,650	0/0:18,0:18:39:0,39,352	0/0:36,0:36:83.99:0,84,753	0/0:28,0:28:81.04:0,81,741	0/0:39,0:39:95.12:0,95,873	0/0:36,0:36:84.03:0,84,768	1/1:2,19:21:51.15:588,51,0	0/0:21,0:21:48.02:0,48,439	1/1:7,27:34:78.23:899,78,0	0/0:23,0:23:59.07:0,59,528	0/0:23,0:23:66:0,66,594	0/0:32,0:32:83.95:0,84,747	0/0:23,1:24:31.43:0,31,542	0/0:13,0:13:26.99:0,27,245	0/0:38,0:38:99:0,105,960	0/0:13,0:13:35.99:0,36,321	1/1:2,19:21:60.17:684,60,0	1/1:2,16:18:42.12:485,42,0	1/1:1,14:15:36.11:415,36,0	0/0:30,0:30:84.05:0,84,769	0/0:29,0:29:81.04:0,81,741	0/0:28,0:27:78.02:0,78,709	0/0:17,0:17:42.43:0,42,376
chr10	100818924	.	CCTCTCTCT	C	586.40	PASS	AB=1.000;AC=19;AF=0.365;AN=52;BaseQRankSum=3.019;DP=423;FS=0.000;HRun=0;HaplotypeScore=101.9991;InbreedingCoeff=0.5213;MQ=40.45;MQ0=52;MQRankSum=-3.151;QD=4.13;ReadPosRankSum=-0.573;VQSLOD=1.5554;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:14.32:0,14,149	0/1:8,0:7:9.36:9,0,74	./.	./.	0/0:20,0:17:15.04:0,15,475	0/0:17,0:18:30.10:0,30,845	0/0:18,0:16:24:0,24,386	1/1:22,0:18:2.64:20,3,0	0/0:13,0:12:21.05:0,21,459	0/0:17,0:15:33.11:0,33,941	0/0:13,0:14:18.52:0,19,456	0/0:9,0:5:2.22:0,2,7	0/0:14,0:15:18.04:0,18,452	0/0:11,0:8:2.10:0,2,28	0/1:15,0:14:40.34:40,0,269	1/1:1,9:10:9.03:224,9,0	0/0:14,0:12:16.99:0,17,494	0/0:4,0:1:2.98:0,3,22	1/1:14,1:15:8.30:112,8,0	1/1:13,6:18:5.81:66,6,0	1/1:15,0:12:5.16:25,5,0	0/0:10,0:9:8.96:0,9,122	0/1:9,0:6:0.03:0,0,1	0/0:13,0:10:2.82:0,3,38	0/0:17,0:18:9.32:0,9,311	1/1:12,5:16:12.02:227,12,0	1/1:3,0:3:2.22:7,2,0	1/1:4,0:5:2.90:16,3,0
chr10	100819919	.	G	GA	3233.06	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=-6.728;DP=689;FS=0.748;HRun=10;HaplotypeScore=76.3046;InbreedingCoeff=0.8071;MQ=66.75;MQ0=2;MQRankSum=1.644;QD=11.76;ReadPosRankSum=-1.387;VQSLOD=3.0461;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:52:74.11:0,74,1013	1/1:0,1:9:20.18:123,20,0	0/1:39,0:20:11.93:12,0,182	0/1:28,0:14:18.11:18,0,77	0/0:26,1:27:19.56:0,20,378	0/0:15,0:15:16.44:0,16,183	0/0:28,1:29:45.27:0,45,567	1/1:10,25:34:61.38:634,61,0	0/0:21,0:21:56.80:0,57,458	0/0:24,0:24:53.88:0,54,442	0/0:29,0:29:62.87:0,63,510	0/0:13,0:14:31.04:0,31,233	0/0:27,0:27:71.89:0,72,587	0/0:22,0:22:3.30:0,3,361	1/1:1,1:17:25.70:129,26,0	1/1:3,15:18:33.08:352,33,0	0/0:35,1:38:87.25:0,87,748	0/0:25,0:25:56.86:0,57,462	1/1:5,13:18:19.08:355,19,0	1/1:6,21:27:38.41:559,38,0	1/1:3,12:15:21.05:224,21,0	0/0:12,0:12:26.96:0,27,221	0/0:21,0:22:55.16:0,55,446	0/0:29,0:29:83.90:0,84,689	0/0:27,0:27:65.28:0,65,524	1/1:9,17:26:7.13:478,7,0	1/1:6,24:29:45.06:467,45,0	1/1:6,6:11:9.49:97,9,0
chr10	100820729	.	A	ACT	5611.10	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-12.415;DP=550;FS=3.487;HRun=0;HaplotypeScore=62.3010;InbreedingCoeff=0.9959;MQ=82.36;MQ0=2;MQRankSum=-0.899;QD=41.56;ReadPosRankSum=1.830;VQSLOD=6.1047;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:84.29:1429,84,0	0/0:5,0:5:15.05:0,15,195	0/0:23,0:22:54.07:0,54,635	0/0:17,0:17:30.10:0,30,383	0/0:30,0:30:81.23:0,81,1024	0/0:31,0:31:78.25:0,78,1014	0/0:9,0:9:27.07:0,27,337	0/0:28,0:28:72.22:0,72,924	0/0:18,0:18:54.18:0,54,702	0/0:22,0:22:63.20:0,63,808	0/0:18,0:18:48.16:0,48,624	1/1:1,16:17:42.14:714,42,0	0/0:20,0:20:48.13:0,48,608	1/1:3,19:22:42.14:714,42,0	0/0:18,0:18:48.16:0,48,624	0/0:17,0:17:51.17:0,51,663	0/0:19,0:19:48.13:0,48,607	0/0:14,0:14:36.08:0,36,449	0/0:16,0:16:45.13:0,45,571	0/0:16,0:16:45.15:0,45,585	0/0:19,0:19:54.16:0,54,686	1/1:1,12:13:33.11:561,33,0	1/1:0,25:25:69.22:1173,69,0	1/1:3,21:24:60.21:1021,60,0	0/0:16,0:16:39.13:0,39,507	0/0:24,0:24:72.23:0,72,936	0/0:27,0:26:81.26:0,81,1054	0/0:8,0:8:24.08:0,24,312
chr10	100821888	.	G	GTC	8415.66	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-9.870;DP=754;FS=5.038;HRun=0;HaplotypeScore=91.7788;InbreedingCoeff=0.9997;MQ=84.33;MQ0=0;MQRankSum=-7.437;QD=47.55;ReadPosRankSum=3.341;VQSLOD=6.1221;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,39:40:99:1980,108,0	0/0:9,0:9:27.09:0,27,387	0/0:43,0:42:99:0,111,1491	0/0:27,0:26:68.92:0,69,934	0/0:39,0:39:99:0,108,1526	0/0:25,0:25:75.24:0,75,1055	0/0:25,0:25:72.21:0,72,994	0/0:35,0:35:99:0,99,1323	0/0:26,0:26:78.23:0,78,1080	0/0:24,0:24:60.20:0,60,859	0/0:10,0:10:30.10:0,30,430	1/1:1,27:28:78.27:1430,78,0	0/0:24,0:24:66.21:0,66,929	1/1:1,23:24:66.23:1210,66,0	0/0:30,0:30:81.25:0,81,1124	0/0:23,0:23:69.23:0,69,989	0/0:26,0:26:75.25:0,75,1074	0/0:22,0:22:63.21:0,63,892	0/0:25,0:25:66.21:0,66,927	0/0:34,0:34:99:0,99,1401	0/0:38,0:38:99:0,102,1461	1/1:2,33:36:90.31:1650,90,0	1/1:1,22:24:63.22:1155,63,0	1/1:0,24:25:54.19:990,54,0	0/0:21,0:21:63.20:0,63,886	0/0:32,0:32:96.31:0,96,1355	0/0:24,0:24:63.21:0,63,902	0/0:15,0:15:42.11:0,42,563
chr10	100822828	.	GTACTAC	G	2067.62	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.404;DP=691;FS=3.136;HRun=0;HaplotypeScore=158.2883;InbreedingCoeff=0.9524;MQ=61.40;MQ0=2;MQRankSum=-8.705;QD=15.09;ReadPosRankSum=2.351;VQSLOD=3.3465;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:33:12.04:253,12,0	0/0:10,0:10:24.07:0,24,663	0/0:33,0:24:55.50:0,56,966	0/0:35,0:26:27.58:0,28,879	0/0:20,0:20:51.17:0,51,1534	0/0:28,0:28:69.20:0,69,2023	0/0:20,0:20:48.15:0,48,1416	0/0:35,0:35:78.25:0,78,1883	0/0:15,0:15:36.12:0,36,1119	0/0:30,0:30:72.23:0,72,1903	0/0:18,0:18:42.01:0,42,994	1/1:0,23:23:44.90:880,45,0	0/0:39,0:39:99:0,105,2873	1/1:4,20:24:24.08:514,24,0	0/0:32,0:32:87.28:0,87,2417	0/0:47,0:48:99:0,141,3757	0/0:16,0:16:43.39:0,43,1209	0/0:19,0:19:27.85:0,28,1545	0/0:22,0:21:48.13:0,48,1207	0/0:23,0:23:60.19:0,60,1583	0/0:32,0:32:90.27:0,90,2443	1/1:2,13:15:12.04:265,12,0	1/1:4,16:20:6.02:132,6,0	1/1:4,18:22:9.50:200,10,0	0/0:26,0:26:60.19:0,60,1598	0/0:20,0:20:51.17:0,51,1373	0/0:24,0:23:69.24:0,69,2014	0/0:7,0:7:21.07:0,21,717
chr10	100825666	.	GTCTA	G	1372.36	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=3.123;DP=509;FS=0.000;HRun=0;HaplotypeScore=122.7267;InbreedingCoeff=0.8687;MQ=54.06;MQ0=11;MQRankSum=1.568;QD=16.34;ReadPosRankSum=3.084;VQSLOD=3.4227;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,9:23:40.43:550,40,0	0/0:4,0:8:8.06:0,8,111	0/0:10,0:5:2.98:0,3,21	./.	0/0:25,0:25:59.96:0,60,1162	0/0:17,0:17:36.08:0,36,671	0/0:15,0:15:30.05:0,30,507	0/0:47,0:44:50.16:0,50,443	0/0:19,0:19:24.05:0,24,448	0/0:17,0:17:39.13:0,39,858	0/0:17,0:17:39.07:0,39,630	1/1:10,9:19:12.04:188,12,0	0/0:2,0:14:18.06:0,18,315	1/1:6,5:11:15.05:238,15,0	0/0:6,0:22:15.05:0,15,262	0/0:5,0:10:3.01:0,3,50	0/0:14,0:13:14.99:0,15,237	0/0:17,0:16:35.95:0,36,582	0/0:11,0:24:44.91:0,45,466	0/0:32,0:32:25.63:0,26,196	0/0:27,0:27:15.02:0,15,195	1/1:2,6:8:9.03:144,9,0	1/1:3,9:12:12.04:190,12,0	1/1:3,8:11:15.05:238,15,0	0/0:10,0:10:12.03:0,12,241	0/0:5,0:23:45.53:0,46,496	0/0:30,0:29:26.22:0,26,311	0/0:4,0:15:21:0,21,252
chr10	100826828	.	GTC	G	395.37	PASS	AB=0.927;AC=13;AF=0.260;AN=50;BaseQRankSum=-0.129;DP=645;FS=44.070;HRun=0;HaplotypeScore=125.3083;InbreedingCoeff=-0.3028;MQ=64.55;MQ0=8;MQRankSum=1.775;QD=1.49;ReadPosRankSum=3.648;VQSLOD=0.6676;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:5.97:0,6,48	0/0:10,0:10:8.21:0,8,40	./.	0/0:52,0:25:0:0,0,1	0/1:17,1:18:66.24:105,0,66	0/1:13,2:16:20.83:21,0,100	0/0:24,0:23:9.02:0,9,114	./.	0/1:20,1:21:44.80:45,0,264	0/1:26,1:27:30.97:31,0,301	0/0:13,0:16:10.05:0,10,137	0/0:18,0:19:10.98:0,11,64	0/1:30,2:32:99:177,0,100	0/0:20,0:22:8.36:0,8,58	0/1:22,0:22:8.55:9,0,79	0/0:28,0:29:14.27:0,14,51	0/1:26,8:35:29.53:30,0,442	0/1:8,4:11:49.44:49,0,54	1/1:14,0:14:0.47:1,0,0	0/0:15,0:16:2.74:0,3,12	./.	0/0:25,0:24:1.14:0,1,9	0/0:23,0:23:1.24:0,1,42	0/0:21,0:22:3:0,3,26	0/1:16,0:16:22.52:23,0,157	0/1:30,0:30:11.06:11,0,42	0/1:21,0:21:21.88:22,0,46	0/0:8,0:7:4.44:0,4,14
chr10	100826859	.	T	TCACACA	1608.01	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=9.255;DP=603;FS=2.117;HRun=0;HaplotypeScore=131.1347;InbreedingCoeff=0.4179;MQ=49.57;MQ0=9;MQRankSum=-7.087;QD=7.62;ReadPosRankSum=0.509;VQSLOD=2.3963;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:11.69:0,12,202	0/0:7,0:7:14.64:0,15,219	0/0:25,0:10:11.70:0,12,311	0/0:22,0:10:26.97:0,27,476	0/0:23,0:23:60.17:0,60,1235	0/0:17,0:17:45.14:0,45,976	0/0:26,0:25:51.62:0,52,1117	0/0:13,0:10:2.09:0,2,431	0/0:30,0:30:84.27:0,84,1905	0/0:27,0:27:78.26:0,78,1704	0/0:15,0:15:34.66:0,35,690	0/1:21,0:20:76.60:128,0,77	0/0:34,0:34:87.54:0,88,1838	0/1:20,0:20:25.55:26,0,122	0/0:21,0:21:17.11:0,17,223	1/1:7,17:25:12.04:286,12,0	0/0:41,0:41:99:0,99,2112	0/0:13,0:12:27.56:0,28,561	0/1:8,0:7:48.87:93,0,49	1/1:24,1:24:2.76:55,3,0	1/1:13,0:10:6.02:82,6,0	0/1:22,0:20:37.88:69,0,38	0/1:23,0:22:1.13:1,0,200	0/0:19,0:19:2.56:0,3,39	0/0:27,0:27:69.22:0,69,1544	1/1:20,0:19:38.06:645,38,0	1/1:10,15:22:2.46:194,2,0	1/1:3,5:7:4.46:197,4,0
chr10	100826861	.	T	TCACACACA	1686.55	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=9.400;DP=595;FS=3.131;HRun=0;HaplotypeScore=139.5788;InbreedingCoeff=0.4927;MQ=51.17;MQ0=8;MQRankSum=-7.552;QD=8.52;ReadPosRankSum=-0.437;VQSLOD=2.3796;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:9.37:0,9,212	0/0:8,0:8:14.99:0,15,230	0/0:26,0:12:11.66:0,12,470	0/0:21,0:10:20.97:0,21,460	0/0:23,0:23:57.20:0,57,1433	0/0:18,0:18:45.14:0,45,1155	0/0:24,0:23:48.62:0,49,1284	0/0:13,0:10:23.39:0,23,269	0/0:31,0:31:84.22:0,84,2213	0/0:26,0:26:78.27:0,78,1949	0/0:16,0:16:37.65:0,38,838	0/1:22,0:21:92.16:208,0,92	0/0:36,0:36:82.21:0,82,1941	0/1:19,0:19:70.10:70,0,134	0/0:21,0:21:11.86:0,12,149	1/1:24,0:24:12.04:261,12,0	0/0:42,0:42:94.87:0,95,2569	0/0:14,0:13:30.08:0,30,736	1/1:7,0:6:8.78:153,9,0	1/1:7,14:23:5.05:79,5,0	1/1:12,0:9:5.99:52,6,0	0/1:22,0:20:13.09:52,0,13	0/1:22,0:21:14.87:15,0,211	0/0:18,0:18:2.99:0,3,53	0/0:27,0:27:69.19:0,69,1744	1/1:15,0:14:33.29:576,33,0	0/1:24,0:21:3.39:227,0,3	1/1:7,0:6:6.02:172,6,0
chr10	100826867	.	T	TCACACA	2030.38	PASS	AB=0.941;AC=24;AF=0.429;AN=56;BaseQRankSum=8.362;DP=586;FS=4.348;HRun=0;HaplotypeScore=127.1735;InbreedingCoeff=0.4418;MQ=54.90;MQ0=8;MQRankSum=-6.117;QD=7.38;ReadPosRankSum=-2.030;VQSLOD=2.2052;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:8.49:0,8,62	0/1:5,4:11:10.96:144,0,11	0/0:27,0:14:26.33:0,26,680	0/0:16,0:7:17.98:0,18,333	0/0:22,0:22:5.08:0,5,812	0/0:18,0:18:45.15:0,45,985	0/0:22,0:21:48.64:0,49,1062	1/1:14,0:11:2.49:54,2,0	0/0:31,0:31:39.36:0,39,1649	0/0:29,0:29:52.31:0,52,1274	0/0:16,0:16:36.54:0,37,661	0/1:20,0:19:31.88:146,0,32	0/1:35,0:35:26.80:27,0,778	0/1:19,0:19:12.03:74,0,12	0/1:23,0:23:31.39:138,0,31	1/1:25,0:25:12.04:292,12,0	0/0:44,0:44:99:0,105,2059	0/0:16,0:15:36.06:0,36,654	1/1:8,0:7:12.14:145,12,0	1/1:26,0:25:12.02:221,12,0	1/1:10,0:7:3.01:36,3,0	1/1:18,0:16:9:81,9,0	0/1:21,0:20:4.18:4,0,41	0/0:17,0:17:2.98:0,3,30	0/0:25,0:25:57.81:0,58,1284	1/1:14,0:13:31.23:473,31,0	1/1:24,0:21:9.10:186,9,0	1/1:7,0:6:6.02:199,6,0
chr10	100826869	.	T	TCACACACACACACACA	7277.33	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=3.423;DP=665;FS=14.783;HRun=0;HaplotypeScore=236.4652;InbreedingCoeff=0.8252;MQ=54.66;MQ0=6;MQRankSum=-10.624;QD=24.34;ReadPosRankSum=-3.226;VQSLOD=2.0653;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,3:33:8.59:400,9,0	1/1:10,0:11:4.41:26,4,0	0/0:26,0:14:41.88:0,42,1115	0/0:14,0:9:18.06:0,18,636	0/0:21,0:21:41.41:0,41,1553	0/0:18,0:18:45.11:0,45,1774	0/0:22,0:21:44.80:0,45,1839	1/1:21,0:18:48.10:1529,48,0	0/0:30,0:30:49.23:0,49,2887	0/0:30,0:30:54.98:0,55,1833	0/0:16,0:16:25.59:0,26,1130	1/1:4,9:26:5.45:440,5,0	0/0:35,0:35:36.07:0,36,1680	1/1:10,7:24:5.98:259,6,0	1/1:5,0:25:5.60:99,6,0	1/1:32,0:32:21.03:394,21,0	0/0:45,0:45:90.64:0,91,3433	0/0:16,0:15:30.10:0,30,1155	1/1:15,0:14:42.01:1453,42,0	1/1:34,0:33:11.61:377,12,0	0/0:7,2:12:1.25:0,1,3	0/0:6,1:21:0.47:0,0,1	0/0:8,0:29:0.10:0,0,1	1/1:21,0:21:8.77:164,9,0	0/0:25,0:25:57.85:0,58,2208	1/1:18,0:17:41.62:1428,42,0	1/1:28,0:25:19.18:493,19,0	1/1:8,0:7:6.02:214,6,0
chr10	100829976	.	T	TC	6013.73	PASS	AB=0.522;AC=15;AF=0.268;AN=56;BaseQRankSum=-4.356;DP=480;FS=1.194;HRun=1;HaplotypeScore=51.8327;InbreedingCoeff=0.9254;MQ=87.74;MQ0=0;MQRankSum=-4.601;QD=40.09;ReadPosRankSum=-0.396;VQSLOD=5.0158;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.23:0,75,955	0/0:13,0:13:36.12:0,36,467	0/0:17,0:17:48.13:0,48,598	0/0:26,0:26:74.40:0,74,888	0/0:16,0:16:48.16:0,48,621	0/0:10,0:10:27.07:0,27,336	0/0:18,0:18:54.17:0,54,690	1/1:0,26:26:78.24:1127,78,0	0/0:18,0:18:54.15:0,54,673	0/0:18,0:18:54.17:0,54,691	0/0:16,0:16:48.16:0,48,623	0/0:9,0:9:27.09:0,27,350	0/0:16,0:16:48.16:0,48,623	0/0:22,0:22:63.20:0,63,818	0/0:22,0:22:60.18:0,60,760	1/1:0,15:15:42.14:627,42,0	0/0:18,0:18:54.18:0,54,700	0/0:12,0:12:33.11:0,33,428	1/1:0,19:19:57.19:838,57,0	1/1:1,17:18:48.16:719,48,0	1/1:0,22:22:57.19:853,57,0	0/0:4,0:4:9.03:0,9,117	0/0:13,0:13:39.11:0,39,490	0/0:25,0:25:75.24:0,75,974	0/0:12,0:12:36.12:0,36,466	0/1:1,11:12:2.84:457,0,3	1/1:0,31:31:81.05:1213,81,0	1/1:1,6:7:12.04:180,12,0
chr10	100830473	.	AT	A	7006.86	PASS	AB=0.563;AC=31;AF=0.554;AN=56;BaseQRankSum=14.127;DP=532;FS=5.308;HRun=9;HaplotypeScore=51.5891;InbreedingCoeff=0.9009;MQ=70.22;MQ0=1;MQRankSum=-0.124;QD=22.39;ReadPosRankSum=1.117;VQSLOD=5.6918;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:24:56.94:521,57,0	1/1:0,6:6:15.01:137,15,0	0/0:10,0:9:20.07:0,20,202	0/0:14,0:14:11.34:0,11,296	0/0:29,0:29:78.23:0,78,899	0/0:30,0:30:81.24:0,81,934	0/0:14,0:14:36.09:0,36,403	1/1:9,42:51:99:1143,126,0	0/0:12,0:12:36.11:0,36,415	0/0:19,0:18:51.12:0,51,567	0/0:21,0:21:60.18:0,60,692	1/1:3,10:13:30.01:274,30,0	0/0:16,0:16:42.12:0,42,476	1/1:3,7:10:15:137,15,0	1/1:3,23:26:63.03:576,63,0	1/1:1,13:14:39.02:357,39,0	0/0:17,0:17:36.09:0,36,404	0/0:13,0:13:33.10:0,33,380	1/1:1,24:25:72.02:654,72,0	1/1:2,21:23:60.02:549,60,0	1/1:1,11:12:30.02:274,30,0	1/1:1,16:17:48.03:439,48,0	1/1:3,15:18:45.02:412,45,0	1/1:1,5:6:15.01:137,15,0	0/0:23,0:24:72.05:0,72,811	0/1:6,21:27:31.85:496,0,32	1/1:3,35:38:93.03:846,93,0	1/1:1,2:3:6:55,6,0
chr10	100831221	.	AT	A	3061.89	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.615;DP=525;FS=11.538;HRun=5;HaplotypeScore=54.4609;InbreedingCoeff=0.9979;MQ=85.40;MQ0=0;MQRankSum=-1.254;QD=28.62;ReadPosRankSum=2.786;VQSLOD=3.2578;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:96.27:1088,96,0	0/0:10,0:10:27.09:0,27,369	0/0:18,0:18:43.87:0,44,551	0/0:22,0:22:33.19:0,33,496	0/0:24,0:24:72.23:0,72,970	0/0:30,0:29:87.29:0,87,1189	0/0:14,0:14:42.14:0,42,573	0/0:43,0:43:99:0,120,1623	0/0:15,0:15:45.14:0,45,599	0/0:25,0:25:66.22:0,66,902	0/0:13,0:13:39.13:0,39,531	1/1:0,14:14:39.11:442,39,0	0/0:19,0:19:54.16:0,54,707	1/1:0,15:15:42.12:476,42,0	0/0:16,0:16:48.13:0,48,624	0/0:20,0:20:57.18:0,57,763	0/0:21,0:21:57.17:0,57,756	0/0:13,0:13:36.12:0,36,492	0/0:16,0:16:45.15:0,45,606	0/0:24,0:24:69.23:0,69,942	0/0:18,0:18:45.15:0,45,615	1/1:0,13:13:36.10:407,36,0	1/1:1,13:14:33.05:360,33,0	1/1:1,14:15:42.12:476,42,0	0/0:18,0:18:51.16:0,51,681	0/0:18,0:18:54.18:0,54,738	0/0:15,0:15:45.14:0,45,599	0/0:6,0:6:18.06:0,18,245
chr10	100831562	.	CCTGA	C	13258.33	PASS	AB=0.734;AC=28;AF=0.500;AN=56;BaseQRankSum=17.029;DP=559;FS=6.982;HRun=0;HaplotypeScore=115.4032;InbreedingCoeff=0.8583;MQ=82.69;MQ0=4;MQRankSum=-8.895;QD=45.25;ReadPosRankSum=2.644;VQSLOD=5.1927;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:78.22:1473,78,0	0/0:12,0:12:30.10:0,30,822	0/0:23,0:23:60.21:0,60,1583	0/0:24,0:23:66.09:0,66,1730	0/0:12,0:12:33.11:0,33,892	0/0:16,0:16:42.14:0,42,1142	0/0:31,0:31:87.30:0,87,2373	1/1:3,16:19:48.15:887,48,0	0/1:17,1:18:12.96:13,0,1096	0/0:24,0:24:72.25:0,72,1952	0/0:14,0:14:42.14:0,42,1142	1/1:0,15:15:39.13:756,39,0	0/0:10,0:10:24.08:0,24,657	1/1:1,18:19:48.12:892,48,0	0/0:33,0:33:99:0,99,2665	1/1:0,21:20:57.20:1105,57,0	0/0:27,0:27:81.28:0,81,2183	0/0:18,0:18:51.18:0,51,1388	1/1:0,7:6:18.06:348,18,0	1/1:0,22:22:63.22:1217,63,0	1/1:1,24:25:66.23:1258,66,0	1/1:1,16:17:33.11:618,33,0	1/1:0,10:10:27.09:523,27,0	1/1:0,31:30:72.25:1395,72,0	0/0:22,0:22:60.18:0,60,1569	0/1:2,24:25:89.19:1261,0,89	1/1:1,23:24:57.20:1105,57,0	1/1:0,7:7:21.07:407,21,0
chr10	100832845	.	C	CT	2741.17	PASS	AB=0.736;AC=19;AF=0.339;AN=56;BaseQRankSum=8.362;DP=584;FS=0.834;HRun=11;HaplotypeScore=75.1650;InbreedingCoeff=0.7220;MQ=74.06;MQ0=1;MQRankSum=-0.375;QD=14.06;ReadPosRankSum=-2.105;VQSLOD=3.4597;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,1:20:23.35:0,23,364	0/1:3,4:7:11.21:79,0,11	0/1:20,0:17:39.30:39,0,66	0/0:20,0:15:16.64:0,17,105	0/0:35,0:37:85.64:0,86,653	0/0:30,1:31:53.22:0,53,596	0/0:24,0:24:68.69:0,69,527	1/1:14,13:27:32.15:355,32,0	0/0:23,0:23:59.74:0,60,462	0/0:29,0:29:56.69:0,57,441	0/0:23,0:24:52.77:0,53,401	0/0:23,0:23:59.74:0,60,463	0/0:12,0:12:29.86:0,30,232	0/0:19,0:19:47.78:0,48,369	1/1:3,15:18:12.74:295,13,0	1/1:2,13:15:12.83:312,13,0	0/0:31,0:32:71.53:0,72,556	0/0:12,0:14:34.91:0,35,261	1/1:7,14:20:36.83:409,37,0	1/1:7,19:26:54.11:548,54,0	1/1:6,4:10:13.27:123,13,0	0/0:15,0:15:32.84:0,33,255	0/0:22,0:22:44.76:0,45,348	0/0:21,0:21:47.79:0,48,371	0/0:23,0:23:23.30:0,23,361	1/1:7,12:21:18.71:353,19,0	0/1:7,21:28:35.77:399,0,36	1/1:0,1:1:3.01:30,3,0
chr10	100832961	.	AT	A	5390.77	PASS	AB=0.917;AC=27;AF=0.482;AN=56;BaseQRankSum=11.919;DP=497;FS=8.417;HRun=8;HaplotypeScore=47.9397;InbreedingCoeff=0.9162;MQ=83.21;MQ0=0;MQRankSum=-1.403;QD=23.34;ReadPosRankSum=0.490;VQSLOD=5.1571;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:33.05:319,33,0	0/0:13,0:13:36.11:0,36,435	0/1:10,1:11:13.96:14,0,102	0/0:16,0:16:28.33:0,28,326	0/0:40,0:40:74.32:0,74,1167	0/0:34,0:34:99:0,102,1232	0/0:14,0:14:30.08:0,30,351	1/1:2,21:23:63.07:597,63,0	0/0:17,0:17:45.14:0,45,544	0/0:23,0:24:60.05:0,60,703	0/0:23,0:23:60.17:0,60,714	1/1:1,19:20:45.07:435,45,0	0/0:15,0:15:42.13:0,42,507	0/0:13,0:13:36.10:0,36,425	0/0:17,0:16:48.11:0,48,565	1/1:0,14:14:32.89:319,33,0	0/0:15,0:15:42.13:0,42,507	0/0:11,0:11:33.10:0,33,399	1/1:0,19:19:57.09:551,57,0	1/1:1,29:30:87.14:840,87,0	1/1:0,13:13:24.04:232,24,0	1/1:1,12:13:33.05:319,33,0	1/1:3,19:22:54.08:521,54,0	1/1:0,15:15:39.06:377,39,0	0/0:14,0:14:39.12:0,39,471	1/1:2,12:14:36.06:347,36,0	1/1:4,19:23:48.07:464,48,0	1/1:0,2:2:6.01:58,6,0
chr10	100834147	.	TTCTCTCTC	T	375.30	PASS	AB=1.000;AC=10;AF=0.217;AN=46;BaseQRankSum=2.693;DP=400;FS=5.481;HRun=0;HaplotypeScore=79.4794;InbreedingCoeff=0.4381;MQ=47.42;MQ0=31;MQRankSum=-2.273;QD=4.81;ReadPosRankSum=-2.822;VQSLOD=0.5739;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:6.49:0,6,101	0/0:8,0:8:8.98:0,9,89	./.	./.	0/0:10,1:13:12.04:0,12,197	0/0:11,0:11:9:0,9,98	0/0:11,0:10:6.02:0,6,88	0/1:18,0:17:11.14:65,0,11	0/0:11,0:11:9.01:0,9,146	0/0:12,0:11:15.05:0,15,276	0/1:7,0:7:0:0,0,0	0/0:10,0:9:0:0,0,0	0/0:6,0:6:4.75:0,5,36	0/0:12,0:12:12.01:0,12,169	0/0:8,0:9:6.02:0,6,104	1/1:6,6:12:6.46:151,6,0	0/0:8,0:9:8.94:0,9,66	0/0:6,0:5:2.98:0,3,22	./.	1/1:9,1:10:1.60:106,2,0	1/1:20,0:19:2.41:11,2,0	0/0:13,0:13:16.07:0,16,227	0/0:12,0:12:15.01:0,15,201	0/0:11,0:19:11.87:0,12,161	0/0:8,0:7:3.01:0,3,77	1/1:9,1:10:5.38:161,5,0	./.	./.
chr10	100834248	.	A	AC	3577.82	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-6.248;DP=352;FS=1.528;HRun=1;HaplotypeScore=42.5759;InbreedingCoeff=0.9576;MQ=70.11;MQ0=0;MQRankSum=-1.345;QD=33.13;ReadPosRankSum=-0.137;VQSLOD=3.1153;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.19:0,66,896	1/1:0,8:8:15.04:214,15,0	0/0:13,0:12:2.54:0,3,221	0/0:17,0:13:17.06:0,17,302	0/0:10,0:10:30.08:0,30,380	0/0:23,0:23:68.90:0,69,898	0/0:15,0:15:42.09:0,42,547	1/1:0,13:13:39.10:521,39,0	0/0:12,0:12:35.57:0,36,422	0/0:16,0:16:45.12:0,45,557	0/0:12,0:12:36.12:0,36,477	0/0:9,0:9:24.07:0,24,317	0/0:7,0:7:21.07:0,21,283	0/0:17,0:17:45.14:0,45,598	1/1:0,8:8:15.05:214,15,0	1/1:0,12:12:29.97:428,30,0	0/0:11,0:11:30.10:0,30,409	0/0:6,0:6:18.04:0,18,224	1/1:0,8:8:24.01:271,24,0	1/1:0,12:12:27.08:385,27,0	1/1:0,10:10:21.06:299,21,0	0/0:13,0:13:36.58:0,37,472	0/0:10,0:10:27.08:0,27,361	0/0:15,0:15:37.96:0,38,539	0/0:15,0:15:42.07:0,42,510	1/1:2,17:19:57.14:759,57,0	1/1:1,11:11:24.08:342,24,0	1/1:1,5:6:11.93:144,12,0
chr10	100834545	.	CTAGATTCATTCTATGACA	C	18148.28	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.868;DP=614;FS=0.000;HRun=0;HaplotypeScore=308.6538;InbreedingCoeff=0.9787;MQ=86.09;MQ0=0;MQRankSum=-14.326;QD=96.02;ReadPosRankSum=3.595;VQSLOD=4.0148;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.28:0,81,5541	1/1:4,8:12:15.05:789,15,0	0/0:21,0:21:63.22:0,63,3083	0/0:25,0:25:72.71:0,73,3049	0/0:22,0:22:63.20:0,63,4919	0/0:26,0:26:78.25:0,78,5634	0/0:26,0:26:75.26:0,75,5531	1/1:9,16:25:48.15:2082,48,0	0/0:30,0:30:87.30:0,87,6768	0/0:32,0:32:93.32:0,93,7323	0/0:17,0:17:51.18:0,51,3929	0/0:23,0:23:69.24:0,69,5681	0/0:22,0:22:66.21:0,66,5413	0/0:26,0:26:72.25:0,72,6131	1/1:5,22:27:60.21:3087,60,0	1/1:3,17:20:42.14:2207,42,0	0/0:26,0:26:75.26:0,75,6303	0/0:22,0:22:66.23:0,66,4996	1/1:8,12:20:36.11:1396,36,0	1/1:2,10:12:27.09:1351,27,0	1/1:5,8:13:8.34:383,8,0	0/0:14,0:14:42.14:0,42,3490	0/0:21,0:21:63.22:0,63,4738	0/0:30,0:30:87.30:0,87,6914	0/0:14,0:14:42.14:0,42,3475	1/1:7,21:28:37.22:3053,37,0	1/1:5,23:28:66.18:3327,66,0	1/1:0,4:4:9.03:473,9,0
chr10	100835835	.	T	TAA	5953.94	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.989;DP=586;FS=13.194;HRun=4;HaplotypeScore=85.7424;InbreedingCoeff=0.9921;MQ=78.09;MQ0=0;MQRankSum=-4.078;QD=32.18;ReadPosRankSum=-1.651;VQSLOD=3.2269;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.23:0,87,1124	1/1:0,0:7:14.84:119,15,0	0/0:17,0:17:31.60:0,32,377	0/0:13,0:13:33.10:0,33,413	0/0:30,0:30:81.23:0,81,1044	0/0:21,0:21:60.18:0,60,784	0/0:21,0:21:60.20:0,60,798	1/1:6,20:26:55.97:804,56,0	0/0:17,0:17:51.15:0,51,663	0/0:33,0:33:90.28:0,90,1185	0/0:22,0:22:66.20:0,66,863	0/0:19,0:19:54.18:0,54,720	0/0:19,0:19:51.13:0,51,661	0/0:23,0:23:63.20:0,63,839	1/1:1,0:18:47.88:383,48,0	1/1:1,15:16:39.13:662,39,0	0/0:30,0:29:81.25:0,81,1062	0/0:18,0:18:51.17:0,51,679	1/1:2,10:17:36.04:502,36,0	1/1:4,14:19:45.02:662,45,0	1/1:3,20:24:45.15:765,45,0	0/0:23,0:23:60.18:0,60,783	0/0:23,0:23:54.17:0,54,719	0/0:20,0:20:60.16:0,60,764	0/0:21,0:21:57.16:0,57,728	1/1:8,17:25:20.63:881,21,0	1/1:10,15:29:65.55:973,66,0	1/1:0,4:4:12.04:204,12,0
chr10	100836458	.	GTT	G	752.71	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.368;DP=525;FS=2.656;HRun=8;HaplotypeScore=128.7617;InbreedingCoeff=0.9623;MQ=60.33;MQ0=6;MQRankSum=-2.375;QD=20.91;ReadPosRankSum=1.561;VQSLOD=1.9622;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:17:42.01:0,42,603	1/1:3,8:9:18.05:217,18,0	0/0:23,0:11:24.08:0,24,370	0/0:25,0:14:27.33:0,27,347	0/0:20,0:20:54.11:0,54,803	0/0:16,0:16:45.10:0,45,696	0/0:11,0:11:24.08:0,24,368	0/0:23,0:22:46.04:0,46,260	0/0:9,0:9:27.08:0,27,424	0/0:19,0:19:57.17:0,57,860	0/0:23,0:23:63.05:0,63,884	0/0:19,0:19:54.12:0,54,860	0/0:19,0:19:47.99:0,48,743	0/0:20,0:20:60.14:0,60,901	1/1:2,23:24:57.05:655,57,0	0/0:24,0:24:60.01:0,60,532	0/0:29,0:29:62.77:0,63,905	0/0:16,0:17:19.26:0,19,383	0/0:15,0:19:46.35:0,46,352	0/0:20,0:23:62.09:0,62,530	0/0:12,0:13:13.99:0,14,99	0/0:17,0:17:48.15:0,48,748	0/0:16,0:16:48.04:0,48,649	0/0:15,0:15:41.67:0,42,687	0/0:14,0:14:39.03:0,39,544	0/0:21,0:21:52.03:0,52,466	0/0:29,0:29:65.22:0,65,559	0/0:3,0:4:11.50:0,12,89
chr10	100836463	.	T	TTTG	6284.70	PASS	AB=0.556;AC=15;AF=0.268;AN=56;BaseQRankSum=2.547;DP=523;FS=5.500;HRun=0;HaplotypeScore=125.5705;InbreedingCoeff=0.8237;MQ=55.27;MQ0=6;MQRankSum=-5.865;QD=41.08;ReadPosRankSum=0.223;VQSLOD=5.9058;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:19:44.98:0,45,598	0/0:8,0:6:2.77:0,3,61	0/0:26,0:9:24.08:0,24,326	0/0:28,0:13:19.58:0,20,311	0/0:19,0:19:52.36:0,52,739	0/0:15,0:15:45.10:0,45,650	0/0:10,0:10:27.08:0,27,354	1/1:5,17:21:57.02:780,57,0	0/0:9,0:9:27.08:0,27,397	0/0:19,0:19:51.16:0,51,750	0/0:27,0:27:73.81:0,74,878	0/0:20,0:20:57.14:0,57,821	0/0:18,0:18:48.15:0,48,723	0/0:20,0:20:60.11:0,60,803	0/0:24,0:23:35.66:0,36,324	1/1:5,21:26:60.13:1242,60,0	0/0:27,0:27:46.59:0,47,789	0/0:18,0:18:21.84:0,22,382	1/1:11,6:17:48.10:780,48,0	1/1:8,14:22:63.01:1132,63,0	1/1:3,10:13:0.16:136,0,0	0/0:16,0:16:48.14:0,48,683	0/0:16,0:16:44.99:0,45,575	0/0:15,0:15:43.02:0,43,619	0/0:13,0:13:39.03:0,39,521	0/1:4,16:20:43.69:814,0,44	1/1:9,20:29:66.08:1177,66,0	1/1:1,3:4:12.04:224,12,0
chr10	100836491	.	GGTTTTTTTTTTTTGGTTTTTTT	G	2606.13	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.348;DP=561;FS=4.698;HRun=0;HaplotypeScore=315.5344;InbreedingCoeff=0.9369;MQ=47.64;MQ0=24;MQRankSum=-2.197;QD=104.25;ReadPosRankSum=-1.444;VQSLOD=2.3628;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:54.14:0,54,2892	1/1:6,2:8:24.01:857,24,0	0/0:60,0:8:24.05:0,24,476	0/0:46,0:11:19.95:0,20,450	0/0:18,0:18:51.14:0,51,3115	0/0:13,0:13:39.07:0,39,2191	0/0:9,0:9:27.05:0,27,1385	0/0:22,0:19:54.01:0,54,1462	0/0:7,0:7:18.01:0,18,968	0/0:15,0:14:42.12:0,42,2762	0/0:26,0:25:75.26:0,75,4855	0/0:21,0:22:38.03:0,38,2925	0/0:13,0:13:33.08:0,33,2082	0/0:18,0:18:41.42:0,41,2425	1/1:8,9:17:51.02:1870,51,0	0/0:27,0:27:81.24:0,81,3268	0/0:26,0:26:60.17:0,60,2756	0/0:19,0:17:13.91:0,14,1594	0/0:15,0:14:31.06:0,31,1291	0/0:28,0:28:84.23:0,84,3130	0/0:6,0:6:12.04:0,12,449	0/0:16,0:13:36.07:0,36,1835	0/0:14,0:15:42.12:0,42,2456	0/0:15,0:15:34.04:0,34,1673	0/0:20,0:19:48.13:0,48,3176	0/0:20,0:19:52.40:0,52,1675	0/0:29,0:29:84.17:0,84,2869	0/0:4,0:4:9.02:0,9,208
chr10	100836492	.	GTTT	G	2986.52	PASS	AB=0.833;AC=18;AF=0.321;AN=56;BaseQRankSum=12.593;DP=581;FS=2.987;HRun=12;HaplotypeScore=148.5775;InbreedingCoeff=0.7876;MQ=47.66;MQ0=24;MQRankSum=-11.127;QD=16.97;ReadPosRankSum=2.567;VQSLOD=1.4423;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:26:50.10:0,50,660	0/1:8,0:8:27.19:27,0,40	0/0:60,1:8:15.02:0,15,176	0/0:46,0:12:6.09:0,6,55	0/0:21,0:21:43.38:0,43,828	0/0:14,0:14:36.10:0,36,614	0/0:9,0:10:27.07:0,27,410	1/1:17,5:19:34.30:347,34,0	0/0:9,0:8:12.04:0,12,233	0/0:17,0:15:42.14:0,42,769	0/0:27,0:26:55.46:0,55,1215	0/0:18,0:21:39.13:0,39,577	0/0:13,0:15:36.04:0,36,554	0/0:20,0:20:36.12:0,36,666	1/1:17,0:17:7.85:111,8,0	1/1:7,20:27:69.01:641,69,0	0/0:25,0:27:52.91:0,53,875	0/0:19,0:17:27.09:0,27,495	1/1:9,5:14:32.88:286,33,0	1/1:4,23:28:77.70:685,78,0	1/1:4,2:6:12.02:119,12,0	0/0:16,0:14:30.10:0,30,451	0/0:9,0:14:36.07:0,36,519	0/0:11,0:15:27.02:0,27,389	0/0:21,0:20:45.13:0,45,784	0/1:10,10:19:18.76:295,0,19	1/1:13,15:29:64.24:596,64,0	1/1:4,0:4:8.94:82,9,0
chr10	100836501	.	TTTTG	T	6198.74	PASS	AB=0.925;AC=18;AF=0.321;AN=56;BaseQRankSum=11.860;DP=575;FS=3.338;HRun=0;HaplotypeScore=145.9980;InbreedingCoeff=0.8308;MQ=49.87;MQ0=25;MQRankSum=-11.989;QD=36.68;ReadPosRankSum=2.749;VQSLOD=4.9924;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:29:44.59:0,45,648	0/1:8,0:8:6.57:60,0,7	0/0:59,0:8:22.59:0,23,170	0/0:41,0:10:11.25:0,11,81	0/0:24,0:24:47.90:0,48,1143	0/0:17,0:17:51.02:0,51,883	0/0:11,0:11:30.07:0,30,529	1/1:12,10:20:53.87:737,54,0	0/0:8,0:7:15:0,15,316	0/0:18,0:16:48.06:0,48,1008	0/0:30,0:29:77.49:0,77,1537	0/0:18,0:17:38.79:0,39,550	0/0:16,0:16:42.11:0,42,780	0/0:20,0:20:35.38:0,35,755	1/1:11,0:11:24.13:216,24,0	1/1:23,2:25:72.17:1196,72,0	0/0:30,0:30:65.13:0,65,1079	0/0:19,0:17:33.09:0,33,587	1/1:11,5:15:32.88:561,33,0	1/1:28,2:30:89.96:1333,90,0	1/1:4,3:6:14.94:220,15,0	0/0:13,0:10:30.08:0,30,440	0/0:15,0:15:35.84:0,36,488	0/0:16,0:16:29.43:0,29,402	0/0:19,0:18:45.15:0,45,1003	0/1:13,3:16:30.13:614,0,30	1/1:25,4:29:77.76:1123,78,0	1/1:1,3:4:9.03:139,9,0
chr10	100836504	.	TGG	T	3831.50	PASS	AB=0.968;AC=25;AF=0.446;AN=56;BaseQRankSum=13.223;DP=568;FS=3.985;HRun=2;HaplotypeScore=136.4019;InbreedingCoeff=0.6061;MQ=52.66;MQ0=23;MQRankSum=-10.087;QD=13.44;ReadPosRankSum=5.023;VQSLOD=1.1689;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:29:30.83:31,0,178	1/1:4,0:8:9.05:50,9,0	0/0:50,2:10:8.62:0,9,89	0/1:37,2:8:30.66:44,0,31	0/0:25,1:26:35.10:0,35,676	0/0:17,0:17:44.47:0,44,489	0/0:13,0:13:24.69:0,25,315	1/1:21,0:19:51.04:486,51,0	0/0:8,0:7:15.05:0,15,199	0/0:17,0:16:47.66:0,48,577	0/0:26,1:26:32.50:0,33,730	0/1:17,1:17:9.47:9,0,64	0/0:16,0:16:18.35:0,18,395	0/0:21,0:21:32.70:0,33,410	1/1:10,0:11:25.73:143,26,0	1/1:24,0:24:72.04:664,72,0	0/0:29,0:29:57.22:0,57,577	0/0:18,0:16:31.65:0,32,311	1/1:17,0:16:27.69:334,28,0	1/1:31,0:31:89.90:820,90,0	1/1:7,0:6:14.40:136,14,0	0/1:12,0:9:4.96:5,0,93	0/1:15,1:16:15.31:15,0,111	0/0:18,0:18:10.66:0,11,111	0/0:19,0:18:40.07:0,40,509	1/1:18,0:17:4.11:354,4,0	1/1:26,0:26:71.99:659,72,0	1/1:4,0:4:8.94:81,9,0
chr10	100836505	.	GGTT	G	4425.81	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=12.373;DP=563;FS=3.415;HRun=0;HaplotypeScore=143.5097;InbreedingCoeff=0.8673;MQ=54.02;MQ0=21;MQRankSum=-10.146;QD=26.66;ReadPosRankSum=4.715;VQSLOD=5.0803;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:29:5.07:0,5,182	1/1:8,0:8:1.48:39,1,0	0/0:54,0:11:15.97:0,16,182	0/0:38,0:8:6.98:0,7,45	0/0:26,0:26:56.23:0,56,990	0/0:14,0:14:42.10:0,42,676	0/0:13,0:13:34.32:0,34,429	1/1:11,10:19:50.42:526,50,0	0/0:9,0:8:15.03:0,15,215	0/0:17,0:16:47.73:0,48,670	0/0:27,0:26:69:0,69,1075	0/0:19,0:18:23.21:0,23,253	0/0:17,0:17:42.38:0,42,593	0/0:20,0:20:28.19:0,28,386	1/1:11,0:11:20.24:134,20,0	1/1:4,21:25:74.73:845,75,0	0/0:29,0:29:61.62:0,62,675	0/0:17,0:16:28.06:0,28,310	1/1:7,10:16:14.67:420,15,0	1/1:2,29:31:92.80:1063,93,0	1/1:4,3:6:14.66:103,15,0	0/0:12,0:9:19.41:0,19,174	0/0:17,0:17:15.16:0,15,130	0/0:16,0:16:17.07:0,17,156	0/0:19,0:18:44.72:0,45,658	1/1:6,11:16:0.25:439,0,0	1/1:9,16:25:71.71:823,72,0	1/1:4,0:4:6.66:34,7,0
chr10	100836506	.	GTT	G	2341.31	PASS	AB=0.822;AC=23;AF=0.411;AN=56;BaseQRankSum=9.984;DP=570;FS=0.000;HRun=16;HaplotypeScore=142.3257;InbreedingCoeff=0.5211;MQ=55.92;MQ0=21;MQRankSum=-7.818;QD=9.07;ReadPosRankSum=5.877;VQSLOD=0.9701;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,16:29:17.26:146,17,0	0/1:8,0:8:8.43:8,0,42	0/0:56,0:11:17.77:0,18,143	0/0:41,0:10:8.55:0,9,56	0/0:25,0:26:60.05:0,60,606	0/0:13,0:14:35.56:0,36,369	0/0:12,0:13:10.13:0,10,238	1/1:22,0:20:27.98:227,28,0	0/0:5,0:8:8.94:0,9,79	0/0:15,1:17:31.74:0,32,298	0/0:23,1:26:39.77:0,40,600	0/1:9,8:17:64.87:65,0,88	0/0:17,0:17:41.90:0,42,411	0/0:14,0:20:17.34:0,17,144	0/1:11,0:11:8.55:53,0,9	1/1:25,0:25:58.43:427,58,0	0/0:19,0:30:37.89:0,38,364	0/0:11,0:16:11.98:0,12,126	1/1:17,0:16:6.63:181,7,0	1/1:31,0:31:71.85:542,72,0	1/1:7,0:6:2.57:22,3,0	0/1:8,3:9:21.79:22,0,38	1/1:7,10:17:0.55:144,1,0	0/1:9,7:16:11:59,0,11	0/0:16,0:18:38.03:0,38,336	1/1:17,0:16:11.04:221,11,0	1/1:25,0:25:56.17:416,56,0	0/0:4,0:4:0:0,0,0
chr10	100837076	.	T	TG	2784.56	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.550;DP=576;FS=0.354;HRun=7;HaplotypeScore=90.6334;InbreedingCoeff=0.9981;MQ=79.97;MQ0=0;MQRankSum=-5.801;QD=13.45;ReadPosRankSum=-0.562;VQSLOD=3.0340;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:60.02:0,60,564	1/1:1,15:16:39.12:471,39,0	0/0:22,0:21:44.19:0,44,396	0/0:25,0:21:53.92:0,54,491	0/0:28,0:28:39.40:0,39,605	0/0:20,0:20:57.08:0,57,546	0/0:19,0:19:51.08:0,51,492	1/1:7,0:23:46.60:260,47,0	0/0:27,0:27:72.09:0,72,688	0/0:26,0:26:60.09:0,60,579	0/0:24,0:24:55.16:0,55,488	0/0:13,0:13:39.04:0,39,365	0/0:21,0:21:51.07:0,51,492	0/0:18,0:18:51.07:0,51,488	1/1:3,21:24:54.17:652,54,0	1/1:4,0:30:69.03:353,69,0	0/0:25,0:25:66.10:0,66,637	0/0:8,0:8:24.04:0,24,232	1/1:6,1:17:31.69:185,32,0	1/1:9,0:22:34.14:177,34,0	1/1:2,0:9:17.47:114,17,0	0/0:20,0:20:50.81:0,51,460	0/0:21,0:21:44.95:0,45,409	0/0:13,0:13:30.01:0,30,275	0/0:14,0:14:39.02:0,39,364	1/1:8,1:20:37.31:209,37,0	1/1:5,0:32:80.42:410,80,0	1/1:1,0:13:34.47:175,34,0
chr10	100837490	.	A	ACTCCTT	2979.49	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=0.861;DP=695;FS=0.880;HRun=0;HaplotypeScore=180.1644;InbreedingCoeff=0.2967;MQ=66.88;MQ0=3;MQRankSum=-3.881;QD=10.87;ReadPosRankSum=-0.334;VQSLOD=2.8994;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:68.79:0,69,1217	1/1:13,0:12:0.57:81,1,0	0/0:28,0:20:17.83:0,18,269	0/0:19,0:17:16.52:0,17,171	0/0:29,0:29:52.21:0,52,1243	0/0:35,0:35:72.19:0,72,1257	0/0:20,0:19:10.73:0,11,775	1/1:34,0:33:47.67:618,48,0	1/1:5,24:30:39.13:1184,39,0	0/0:40,0:40:99:0,99,1809	0/0:26,0:26:54.17:0,54,1032	0/0:29,0:24:42.05:0,42,724	0/0:30,0:30:60.12:0,60,1006	0/0:22,0:22:23.82:0,24,1002	1/1:23,0:20:20:173,20,0	0/1:19,0:19:50.69:51,0,167	0/0:12,0:12:24.06:0,24,422	0/0:19,0:19:18.88:0,19,532	0/1:24,0:23:72.21:87,0,72	0/1:24,0:24:99:308,0,154	0/1:25,0:25:25.58:269,0,26	0/0:28,0:28:51.10:0,51,929	0/0:17,0:17:29.99:0,30,584	0/0:17,0:15:33.07:0,33,507	0/0:15,0:15:39.12:0,39,729	0/1:39,0:39:99:249,0,210	0/1:27,0:26:96.50:96,0,186	0/1:16,0:16:37.19:37,0,46
chr10	100837507	.	T	TCC	746.44	PASS	AB=0.591;AC=2;AF=0.036;AN=56;BaseQRankSum=4.906;DP=688;FS=3.514;HRun=2;HaplotypeScore=130.7913;InbreedingCoeff=0.3625;MQ=52.23;MQ0=13;MQRankSum=-2.458;QD=19.14;ReadPosRankSum=2.554;VQSLOD=1.7821;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:92.51:0,93,1398	0/1:4,9:12:0.14:279,0,0	0/0:28,0:13:35.60:0,36,513	0/0:18,0:10:25.90:0,26,390	0/0:32,0:32:96.30:0,96,1494	0/0:33,0:33:95.89:0,96,1478	0/0:28,0:27:69.77:0,70,1076	0/0:33,0:26:60.57:0,61,1026	0/0:31,0:31:22.52:0,23,190	0/0:40,0:40:99:0,120,1887	0/0:21,0:21:57.19:0,57,929	0/0:30,0:24:69.24:0,69,1121	0/0:25,0:25:66:0,66,1074	0/0:27,0:27:72.22:0,72,1107	0/1:8,18:22:34.23:556,0,34	0/0:18,0:18:51.17:0,51,830	0/0:13,0:14:38.73:0,39,567	0/0:24,0:24:72.08:0,72,1094	0/0:19,0:15:42.12:0,42,655	0/0:20,0:19:54.14:0,54,826	0/0:16,0:17:30.83:0,31,554	0/0:26,0:26:78.23:0,78,1200	0/0:21,0:21:54.10:0,54,819	0/0:25,0:19:54.13:0,54,839	0/0:18,0:18:48.16:0,48,772	0/0:37,0:35:99:0,99,1471	0/0:17,0:16:42.14:0,42,676	0/0:11,0:11:18.03:0,18,259
chr10	100837508	.	T	TC	372.50	PASS	AB=0.708;AC=3;AF=0.054;AN=56;BaseQRankSum=7.398;DP=690;FS=11.023;HRun=1;HaplotypeScore=121.6993;InbreedingCoeff=0.0150;MQ=51.91;MQ0=13;MQRankSum=-1.995;QD=7.16;ReadPosRankSum=2.755;VQSLOD=-0.0552;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:83.95:0,84,1107	0/1:5,9:13:10.02:147,0,10	0/0:27,0:12:19.88:0,20,393	0/0:17,0:9:25.89:0,26,315	0/0:31,0:31:92.96:0,93,1159	0/0:32,0:32:91.46:0,91,1188	0/0:29,0:29:71.91:0,72,852	0/0:35,0:26:69.05:0,69,853	0/0:31,0:31:24.94:0,25,180	0/0:40,0:40:99:0,117,1519	0/0:21,0:21:57.19:0,57,740	0/0:30,0:24:69.22:0,69,893	0/0:25,0:25:69.21:0,69,880	0/0:27,0:27:70.37:0,70,902	0/1:9,18:23:12.63:299,0,13	0/0:19,0:19:51.17:0,51,661	0/0:15,0:15:35.62:0,36,436	0/0:25,0:25:65.09:0,65,874	0/0:20,0:15:43.65:0,44,528	0/0:20,0:19:51.16:0,51,633	0/0:17,0:15:4.20:0,4,339	0/0:25,0:25:75.18:0,75,939	0/0:21,0:21:54.15:0,54,671	0/0:25,0:19:57.15:0,57,714	0/0:18,0:18:48.16:0,48,623	0/0:33,3:34:6.39:0,6,1022	0/0:17,0:16:42.14:0,42,540	0/1:10,1:11:26.89:27,0,176
chr10	100837536	.	TCTTCTC	T	707.41	PASS	AB=0.969;AC=12;AF=0.222;AN=54;BaseQRankSum=8.916;DP=693;FS=3.065;HRun=0;HaplotypeScore=185.8375;InbreedingCoeff=0.0789;MQ=47.51;MQ0=18;MQRankSum=-8.384;QD=3.97;ReadPosRankSum=1.034;VQSLOD=2.5841;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:16.09:0,16,1277	1/1:13,1:12:4.26:65,4,0	./.	0/0:16,0:3:3.01:0,3,71	0/0:29,0:29:57.20:0,57,1625	0/0:30,0:29:66.20:0,66,1919	0/0:44,0:42:69.35:0,69,1660	0/1:18,0:9:5.04:5,0,170	0/0:29,0:29:33.11:0,33,1063	0/0:38,0:38:60.18:0,60,1727	0/0:19,0:19:21.06:0,21,581	0/0:40,0:34:6.59:0,7,1725	0/0:27,0:27:66.22:0,66,1972	0/0:29,0:29:50.66:0,51,1725	1/1:23,4:25:14.49:366,14,0	0/1:18,0:19:44.74:121,0,45	0/0:25,0:24:10.58:0,11,1342	0/0:27,0:27:27.61:0,28,1757	0/1:19,0:13:21.43:88,0,21	0/1:16,0:15:17.65:51,0,18	0/1:11,1:10:34.80:35,0,83	0/0:33,0:33:19.20:0,19,1898	0/0:24,0:24:54.16:0,54,1545	0/0:28,0:21:45.02:0,45,1230	0/0:22,0:22:36.03:0,36,1003	0/1:29,0:27:27.88:28,0,368	0/1:14,0:14:19.29:83,0,19	0/1:7,0:7:17.32:17,0,72
chr10	100837545	.	T	TC	408.47	PASS	AB=0.843;AC=6;AF=0.111;AN=54;BaseQRankSum=5.977;DP=688;FS=2.625;HRun=1;HaplotypeScore=135.3865;InbreedingCoeff=-0.1339;MQ=47.19;MQ0=18;MQRankSum=-6.814;QD=4.13;ReadPosRankSum=-0.342;VQSLOD=0.2363;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:72.93:0,73,1107	0/0:11,0:9:14.84:0,15,168	./.	0/0:12,0:1:3.01:0,3,39	0/0:28,0:28:84.26:0,84,1073	0/0:33,0:32:73.27:0,73,1104	0/0:47,0:45:92.66:0,93,1206	0/0:25,0:10:21.06:0,21,262	0/0:24,0:24:52.72:0,53,665	0/0:36,0:36:99:0,99,1281	0/0:18,0:18:48.14:0,48,604	0/0:39,0:33:90.08:0,90,1094	0/0:27,0:27:78.25:0,78,1011	0/0:36,0:36:66.73:0,67,1101	0/0:25,0:22:62.09:0,62,659	0/1:12,6:18:99:176,0,346	0/0:25,0:24:68.25:0,68,860	0/0:31,0:30:87.12:0,87,1065	0/1:16,2:12:75.59:76,0,258	0/1:14,5:19:99:120,0,343	0/0:14,1:12:22.97:0,23,245	0/0:30,0:30:87.16:0,87,1089	0/0:24,0:24:63.20:0,63,818	0/0:33,0:24:36.19:0,36,732	0/0:23,0:23:57.13:0,57,720	0/1:22,3:23:30.93:31,0,590	0/1:11,2:12:92.63:93,0,173	0/1:5,1:6:35.79:36,0,69
chr10	100837556	.	TTC	T	998.20	PASS	AB=0.823;AC=7;AF=0.130;AN=54;BaseQRankSum=7.791;DP=653;FS=0.570;HRun=0;HaplotypeScore=142.5126;InbreedingCoeff=-0.1632;MQ=47.53;MQ0=16;MQRankSum=-3.595;QD=7.80;ReadPosRankSum=-3.504;VQSLOD=2.9703;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:32:77.87:0,78,1282	0/0:8,0:7:3.87:0,4,114	./.	0/0:10,0:1:3.01:0,3,56	0/0:25,0:25:68.95:0,69,1253	0/0:32,0:30:87.30:0,87,1595	0/0:47,0:46:99:0,112,2053	0/0:22,0:9:24.08:0,24,377	0/0:25,0:25:51.17:0,51,922	0/0:33,0:33:90.29:0,90,1607	0/0:18,0:18:45.15:0,45,823	0/0:33,0:29:75.28:0,75,1375	0/0:26,0:26:75.26:0,75,1386	0/0:31,0:31:89.52:0,90,1624	0/1:22,0:19:12.48:12,0,419	0/1:11,7:18:99:256,0,349	0/0:27,1:26:31.08:0,31,1231	0/0:31,1:31:42.62:0,43,1460	0/1:9,3:10:99:188,0,134	0/1:19,4:23:99:169,0,391	0/1:16,1:14:15.27:15,0,291	0/0:30,0:30:75.24:0,75,1360	0/0:21,0:21:60.16:0,60,1082	0/0:33,0:24:63.21:0,63,1148	0/0:23,0:23:56.85:0,57,1062	0/1:15,10:22:99:343,0,399	0/1:7,4:11:99:141,0,215	0/0:7,0:6:15.04:0,15,237
chr10	100837564	.	CTCCT	C	448.62	PASS	AB=0.925;AC=10;AF=0.185;AN=54;BaseQRankSum=7.191;DP=651;FS=3.745;HRun=0;HaplotypeScore=167.9701;InbreedingCoeff=-0.0366;MQ=47.29;MQ0=14;MQRankSum=-5.259;QD=2.69;ReadPosRankSum=-1.208;VQSLOD=2.2640;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:5.08:0,5,963	1/1:6,0:6:2.18:16,2,0	./.	0/0:11,0:4:6.02:0,6,85	0/0:23,0:23:56.94:0,57,1307	0/0:32,0:30:79.51:0,80,1617	0/0:45,0:45:99:0,115,2060	0/0:26,0:13:24.06:0,24,332	0/0:32,0:32:69.19:0,69,1418	0/0:31,0:31:84.09:0,84,1645	0/0:16,0:16:42.14:0,42,746	0/0:29,0:26:54.76:0,55,1489	0/0:29,0:29:78.26:0,78,1570	0/0:31,0:31:64.30:0,64,1715	0/1:15,0:14:5.66:217,0,6	0/1:16,3:19:99:118,0,303	0/1:31,1:30:31.33:31,0,1535	0/0:31,1:31:41.53:0,42,1902	0/1:10,1:10:46.27:46,0,190	0/1:19,2:20:29.24:29,0,395	0/1:17,1:15:32.70:33,0,261	0/0:27,0:27:59.26:0,59,1553	0/0:21,0:21:54.18:0,54,1202	0/0:30,0:22:47.13:0,47,1126	0/0:22,0:22:55.57:0,56,1250	0/1:24,3:24:59.20:59,0,457	0/1:13,2:15:38.27:38,0,331	0/0:7,0:6:14.69:0,15,163
chr10	100837566	.	CCT	C	150.38	PASS	AB=0.929;AC=4;AF=0.074;AN=54;BaseQRankSum=7.619;DP=644;FS=1.383;HRun=0;HaplotypeScore=145.6939;InbreedingCoeff=0.3836;MQ=47.16;MQ0=14;MQRankSum=-4.347;QD=4.56;ReadPosRankSum=0.264;VQSLOD=3.1971;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,3:27:34.21:0,34,1130	1/1:5,1:5:4.94:21,5,0	./.	0/0:9,0:4:5.94:0,6,119	0/0:22,0:22:62.92:0,63,1205	0/0:31,0:29:86.51:0,87,1668	0/0:45,0:45:99:0,129,2401	0/0:27,0:15:33.11:0,33,549	0/0:32,0:32:72.20:0,72,1374	0/0:29,0:29:84.29:0,84,1690	0/0:15,0:15:42.14:0,42,833	0/0:28,0:25:70.40:0,70,1394	0/0:29,0:29:81.26:0,81,1577	0/0:31,0:32:88.50:0,88,1731	0/1:15,1:14:22.42:220,0,22	0/0:19,0:19:26.69:0,27,607	0/0:31,0:30:63.92:0,64,1496	0/0:32,0:31:82.17:0,82,1730	0/1:10,1:9:1.23:1,0,314	0/0:22,0:21:49.59:0,50,762	0/0:19,0:16:20.63:0,21,441	0/0:26,0:26:61.61:0,62,1383	0/0:19,0:19:54.19:0,54,1077	0/0:31,1:23:63.21:0,63,1199	0/0:22,0:22:61.91:0,62,1177	0/0:27,0:24:44.47:0,44,932	0/0:15,0:15:21.51:0,22,544	0/0:7,0:6:15.05:0,15,261
chr10	100837592	.	CCTT	C	79.49	PASS	AB=0.930;AC=6;AF=0.107;AN=56;BaseQRankSum=4.490;DP=686;FS=4.048;HRun=0;HaplotypeScore=153.4149;InbreedingCoeff=0.1429;MQ=46.00;MQ0=23;MQRankSum=-5.056;QD=0.90;ReadPosRankSum=-2.487;VQSLOD=2.3238;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,4:20:99:105,0,464	1/1:6,0:5:3:25,3,0	0/0:19,0:2:6.02:0,6,131	0/0:24,0:5:11.76:0,12,124	0/0:28,0:27:69.15:0,69,1354	0/0:22,0:21:63.21:0,63,1286	0/0:46,0:45:99:0,117,2146	0/0:51,0:33:73.29:0,73,1384	0/0:30,1:31:36.22:0,36,1669	0/0:31,0:31:84.27:0,84,1719	0/0:16,0:16:42.14:0,42,894	0/0:22,0:22:7.73:0,8,726	0/0:25,0:25:72.09:0,72,1342	0/0:34,0:34:74.29:0,74,1839	0/1:9,1:9:22.17:22,0,411	0/0:18,0:18:48.16:0,48,878	0/0:35,1:34:39.46:0,39,1600	0/0:31,0:30:38.93:0,39,1366	0/0:19,0:7:15.05:0,15,291	0/0:24,0:23:63.21:0,63,1126	0/0:21,1:18:25.58:0,26,482	0/1:20,0:21:2.67:3,0,648	0/0:16,0:18:22.18:0,22,577	0/1:25,1:20:37.93:38,0,686	0/0:27,0:27:69.51:0,70,1290	0/0:27,0:23:56.18:0,56,955	0/0:14,0:14:39.10:0,39,624	0/0:10,0:10:27.08:0,27,461
chr10	100837611	.	CTCCT	C	1705.22	PASS	AB=0.964;AC=13;AF=0.232;AN=56;BaseQRankSum=8.365;DP=701;FS=6.988;HRun=0;HaplotypeScore=168.5614;InbreedingCoeff=-0.1361;MQ=45.66;MQ0=27;MQRankSum=0.093;QD=6.74;ReadPosRankSum=3.789;VQSLOD=2.1755;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:24:99:187,0,500	0/0:6,0:4:4.73:0,5,74	0/0:17,0:2:3.01:0,3,44	0/0:20,0:3:6.49:0,6,89	0/0:23,0:22:60.20:0,60,1307	0/0:23,0:22:63.20:0,63,1283	0/0:46,1:45:66.68:0,67,2065	0/0:46,0:25:63.19:0,63,902	0/0:39,0:38:99:0,102,2273	0/0:30,0:29:78.26:0,78,1423	0/0:20,0:20:54.18:0,54,1207	0/1:26,1:23:99:265,0,420	0/0:25,0:25:27.36:0,27,1444	0/0:37,0:37:96.31:0,96,1958	0/0:27,0:24:56.13:0,56,704	1/1:16,0:16:16.69:155,17,0	0/0:34,0:33:72.36:0,72,1799	0/0:26,0:27:22.96:0,23,1313	0/1:16,0:6:16.94:17,0,69	0/1:27,1:26:99:277,0,293	0/1:21,0:19:99:133,0,100	0/1:19,1:17:99:126,0,354	0/1:12,3:14:99:247,0,220	0/1:31,0:26:99:106,0,278	0/0:27,0:27:37.13:0,37,1355	0/1:27,1:25:99:136,0,464	0/1:13,0:12:90.95:91,0,99	0/1:11,1:10:42.59:121,0,43
chr10	100837615	.	T	TTC	3946.95	PASS	AB=0.951;AC=13;AF=0.232;AN=56;BaseQRankSum=8.293;DP=711;FS=2.282;HRun=0;HaplotypeScore=142.6262;InbreedingCoeff=-0.1322;MQ=45.69;MQ0=27;MQRankSum=-2.947;QD=15.85;ReadPosRankSum=4.112;VQSLOD=3.9068;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,2:24:99:217,0,381	0/0:9,0:7:5.07:0,5,80	0/0:14,0:2:3.01:0,3,44	0/0:20,0:2:6.02:0,6,88	0/0:24,0:23:60.18:0,60,880	0/0:23,0:22:66.21:0,66,945	0/0:50,0:47:69.44:0,69,1609	0/0:51,0:26:48.65:0,49,885	0/0:40,0:39:99:0,108,1568	0/0:29,0:28:81.26:0,81,1173	0/0:19,0:19:54.18:0,54,795	0/1:26,2:24:99:331,0,255	0/0:28,0:29:36.83:0,37,1076	0/0:35,0:35:99:0,99,1437	0/0:28,0:25:58.77:0,59,714	1/1:11,1:12:33.10:516,33,0	0/0:37,0:36:84.35:0,84,1287	0/0:26,1:27:20.19:0,20,940	0/1:12,0:5:29.23:100,0,29	0/1:27,1:26:99:669,0,242	0/1:24,0:22:99:282,0,139	0/1:14,2:13:99:198,0,123	0/1:14,1:13:99:268,0,108	0/1:29,2:26:99:259,0,169	0/0:27,0:26:36.79:0,37,947	0/1:29,1:27:99:471,0,385	0/1:13,0:12:43.26:331,0,43	0/1:11,1:10:19.88:305,0,20
chr10	100837616	.	TC	T	1447.16	PASS	AB=0.990;AC=13;AF=0.232;AN=56;BaseQRankSum=10.217;DP=717;FS=8.856;HRun=2;HaplotypeScore=137.6993;InbreedingCoeff=-0.1331;MQ=45.72;MQ0=28;MQRankSum=-0.712;QD=5.79;ReadPosRankSum=2.993;VQSLOD=0.3629;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:24:53.70:54,0,342	0/0:8,0:7:4.67:0,5,117	0/0:14,0:2:3.01:0,3,45	0/0:19,0:2:6.02:0,6,88	0/0:23,0:22:63.10:0,63,922	0/0:23,0:22:66.19:0,66,947	0/0:51,1:49:85.17:0,85,1667	0/0:52,2:26:65.84:0,66,905	0/0:40,0:39:99:0,114,1621	0/0:28,0:27:81.26:0,81,1191	0/0:20,0:19:54.18:0,54,808	0/1:26,1:23:91.26:91,0,289	0/0:29,0:29:73.36:0,73,1154	0/0:35,0:35:99:0,102,1482	0/0:27,0:24:65.68:0,66,783	1/1:12,0:12:29.27:227,29,0	0/0:37,0:36:44.27:0,44,1302	0/0:28,0:28:73.40:0,73,1024	0/1:11,0:5:33.44:33,0,33	0/1:29,0:27:99:319,0,236	0/1:26,0:24:99:155,0,120	0/1:16,0:13:35.43:35,0,223	0/1:15,0:13:86.81:87,0,161	0/1:31,0:26:38.16:38,0,237	0/0:28,0:27:71.91:0,72,1005	0/1:31,0:28:99:247,0,376	0/1:13,0:12:41.22:181,0,41	0/1:11,1:10:21.08:138,0,21
chr10	100837645	.	C	CCTT	1057.52	PASS	AB=0.896;AC=5;AF=0.096;AN=52;BaseQRankSum=1.223;DP=698;FS=4.056;HRun=0;HaplotypeScore=147.1409;InbreedingCoeff=0.2938;MQ=45.06;MQ0=48;MQRankSum=-5.001;QD=11.75;ReadPosRankSum=2.744;VQSLOD=3.2512;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:13:28.91:0,29,474	1/1:6,3:8:10.22:252,10,0	./.	./.	0/0:27,0:25:60.20:0,60,960	0/0:19,0:17:45.02:0,45,685	0/0:45,0:34:42.93:0,43,1095	0/0:39,0:9:4.98:0,5,24	0/0:48,0:44:99:0,123,1893	0/0:26,0:22:63.18:0,63,927	0/0:20,0:19:51.16:0,51,796	0/0:19,0:13:32.47:0,32,468	0/0:33,0:31:75.86:0,76,1260	0/0:34,0:32:90.29:0,90,1418	0/1:17,14:24:99:899,0,105	0/0:30,0:27:58.88:0,59,984	0/0:34,0:34:99:0,99,1539	0/0:31,0:29:38.96:0,39,1058	0/0:16,0:8:24.08:0,24,385	0/0:30,0:25:30.50:0,31,884	0/1:33,0:26:8.83:9,0,674	0/0:14,0:9:7.45:0,7,335	0/0:7,0:5:15.05:0,15,241	0/0:25,0:19:32.75:0,33,411	0/0:26,0:24:72.16:0,72,1058	0/0:39,0:30:28.15:0,28,926	0/0:23,0:18:35.18:0,35,570	0/1:17,0:13:6.59:7,0,330
chr10	100837661	.	CTCCT	C	335.59	PASS	AB=0.975;AC=11;AF=0.212;AN=52;BaseQRankSum=8.326;DP=674;FS=7.377;HRun=0;HaplotypeScore=146.8080;InbreedingCoeff=-0.0428;MQ=45.52;MQ0=41;MQRankSum=-5.844;QD=1.42;ReadPosRankSum=0.123;VQSLOD=2.3059;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:12:13.44:97,13,0	0/1:8,0:7:4.24:4,0,263	./.	./.	0/0:30,0:28:72.24:0,72,1475	0/0:19,0:17:51.17:0,51,1085	0/1:38,2:29:24.78:25,0,1160	0/0:27,0:5:3.01:0,3,62	0/0:45,0:41:99:0,108,2241	0/0:25,0:21:60.20:0,60,1322	0/0:18,0:18:51.17:0,51,1041	0/1:21,0:16:59.97:60,0,218	0/0:33,0:30:81.28:0,81,1890	0/0:39,0:37:99:0,105,2271	0/1:39,0:32:7.50:8,0,1449	0/0:30,0:27:71.73:0,72,1607	0/0:35,0:35:86.96:0,87,1864	0/0:29,0:27:78.22:0,78,1755	0/0:14,0:8:24.08:0,24,544	0/1:26,1:23:52.60:53,0,771	0/0:35,1:29:65.59:0,66,1404	0/1:16,0:10:60.81:61,0,150	0/1:11,0:8:34.66:35,0,197	0/1:21,3:18:93.08:94,0,93	0/0:23,0:21:63.22:0,63,1440	0/1:35,1:26:44.51:45,0,1107	0/0:19,0:14:17.54:0,18,767	0/0:13,0:9:19.71:0,20,383
chr10	100837665	.	TTCCTTC	T	1666.04	PASS	AB=0.906;AC=10;AF=0.192;AN=52;BaseQRankSum=4.147;DP=687;FS=5.319;HRun=0;HaplotypeScore=169.7678;InbreedingCoeff=0.4618;MQ=45.66;MQ0=39;MQRankSum=-4.299;QD=11.41;ReadPosRankSum=-2.284;VQSLOD=2.0012;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,2:13:22.94:403,0,23	0/1:9,0:7:48.56:49,0,209	./.	./.	0/0:31,0:29:51.18:0,51,1614	0/0:19,0:17:39.12:0,39,1200	0/0:42,0:31:46.90:0,47,1370	0/0:29,0:7:9.03:0,9,118	0/0:44,0:40:87.30:0,87,2488	0/0:25,0:20:51.18:0,51,1621	0/0:19,0:19:33.01:0,33,955	1/1:18,5:18:24.08:472,24,0	0/0:34,0:31:81.25:0,81,2315	0/0:40,0:38:90.29:0,90,2637	0/1:35,7:35:99:116,0,2026	0/0:31,0:28:60.21:0,60,1905	0/0:33,0:33:78.27:0,78,2266	0/0:31,0:29:75.25:0,75,2156	0/0:11,0:8:18.02:0,18,506	0/0:24,0:22:30.57:0,31,942	0/0:35,0:28:63.22:0,63,1816	1/1:11,5:10:15.05:296,15,0	1/1:8,3:8:9.03:191,9,0	0/1:25,4:22:60.19:294,0,60	0/0:24,0:22:54.17:0,54,1451	0/0:33,0:25:50.61:0,51,1433	0/0:19,0:14:32.85:0,33,900	0/0:13,0:8:9.03:0,9,301
chr10	100837737	.	TTCCTTCTCCTTCTCCTTCTCCTTCCTTC	T	2356.21	PASS	AB=0.888;AC=16;AF=0.286;AN=56;BaseQRankSum=3.513;DP=725;FS=3.371;HRun=0;HaplotypeScore=445.4995;InbreedingCoeff=0.3340;MQ=52.35;MQ0=25;MQRankSum=-4.001;QD=9.58;ReadPosRankSum=0.305;VQSLOD=0.6759;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:46.28:0,46,859	0/1:6,0:8:59.76:180,0,60	0/0:31,0:19:15.43:0,15,223	0/1:32,0:14:4.72:5,0,111	0/0:27,0:27:66.23:0,66,2754	0/0:21,0:20:54.19:0,54,2003	0/0:41,0:38:69.71:0,70,1959	1/1:25,0:17:8.95:81,9,0	0/0:45,0:42:99:0,102,4448	0/0:39,0:35:78.26:0,78,2839	0/0:15,0:12:24.08:0,24,943	0/0:11,0:11:26.83:0,27,664	0/0:42,0:41:96.79:0,97,3777	0/0:42,0:42:96.33:0,96,4108	0/1:24,0:26:99:282,0,422	0/1:17,0:13:4.63:97,0,5	0/0:45,0:44:72.15:0,72,4052	0/0:35,0:35:79.75:0,80,2980	0/1:9,0:8:53.43:117,0,53	0/1:11,19:28:99:336,0,126	0/1:18,0:13:9.59:157,0,10	0/0:15,0:15:29.28:0,29,607	0/0:11,0:11:17.51:0,18,527	0/1:29,0:26:11.29:11,0,878	0/0:28,0:25:66.23:0,66,2524	1/1:16,0:21:33.11:654,33,0	1/1:12,0:11:15.05:259,15,0	1/1:6,0:6:12.04:353,12,0
chr10	100837755	.	CTCCT	C	1520.87	PASS	AB=0.937;AC=18;AF=0.321;AN=56;BaseQRankSum=11.782;DP=713;FS=13.031;HRun=0;HaplotypeScore=152.5726;InbreedingCoeff=0.1256;MQ=47.33;MQ0=35;MQRankSum=-8.610;QD=5.53;ReadPosRankSum=-0.168;VQSLOD=1.9091;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,4:32:99:240,0,356	1/1:5,1:5:14.88:132,15,0	0/0:7,0:6:9.03:0,9,128	0/0:19,0:6:9.03:0,9,132	0/0:25,0:24:60.21:0,60,1433	0/0:23,0:22:63.21:0,63,1294	0/0:43,0:37:90.30:0,90,1648	0/0:21,0:5:2.68:0,3,11	0/0:45,0:41:99:0,117,2631	0/0:39,0:33:93.32:0,93,1939	0/0:16,0:11:30.10:0,30,682	0/1:13,1:13:55.37:55,0,358	0/0:44,0:42:91.36:0,91,2133	0/0:40,0:40:99:0,111,2389	0/1:34,1:29:99:154,0,405	1/1:16,1:14:23.75:221,24,0	0/0:50,1:51:21.37:0,21,2290	0/0:34,0:35:93:0,93,1945	0/1:12,0:5:30.07:30,0,51	0/1:28,0:25:60.78:110,0,61	0/1:17,1:12:30.24:91,0,30	0/1:16,1:16:57.95:58,0,253	0/1:11,2:12:74.84:75,0,247	0/1:30,4:31:99:170,0,542	0/0:29,0:26:69.24:0,69,1577	0/1:27,2:26:99:252,0,167	1/1:10,1:8:8.66:49,9,0	1/1:6,0:4:10.14:62,10,0
chr10	100837759	.	TTCCTTC	T	1298.17	PASS	AB=0.939;AC=12;AF=0.231;AN=52;BaseQRankSum=4.827;DP=724;FS=4.125;HRun=0;HaplotypeScore=177.2516;InbreedingCoeff=0.0658;MQ=46.55;MQ0=37;MQRankSum=-3.375;QD=6.09;ReadPosRankSum=-1.355;VQSLOD=2.3750;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,4:30:99:260,0,178	0/0:7,0:6:15.58:0,16,147	./.	./.	0/0:29,0:28:63.22:0,63,1859	0/0:23,0:22:39.13:0,39,1163	0/0:42,0:36:69.19:0,69,1662	0/0:24,0:5:11.97:0,12,155	0/0:47,0:43:99:0,105,3062	0/0:41,0:35:84.28:0,84,2516	0/0:17,0:12:27.09:0,27,821	0/1:13,1:14:99:108,0,194	0/0:44,0:41:76.14:0,76,2308	0/0:39,0:39:90.29:0,90,2752	0/0:36,0:31:63.76:0,64,1149	1/1:9,6:15:15.98:378,16,0	0/0:53,0:52:99:0,107,2966	0/0:35,0:35:75.26:0,75,2194	0/0:11,0:5:11.27:0,11,86	0/1:23,0:25:99:115,0,164	0/1:14,0:11:87.65:111,0,88	0/1:15,2:16:77.80:145,0,78	0/1:14,1:13:39.55:40,0,87	0/1:29,3:29:99:122,0,293	0/0:31,0:27:66.18:0,66,1774	0/1:28,2:27:82.43:82,0,420	0/0:8,1:6:0.47:0,0,1	1/1:7,0:6:1.37:86,1,0
chr10	100837834	.	CTT	C	154.85	PASS	AB=0.801;AC=2;AF=0.036;AN=56;BaseQRankSum=4.493;DP=816;FS=2.457;HRun=4;HaplotypeScore=157.0973;InbreedingCoeff=-0.0398;MQ=47.97;MQ0=23;MQRankSum=-3.989;QD=2.98;ReadPosRankSum=-1.434;VQSLOD=-0.5804;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:95.75:0,96,1668	0/1:8,4:12:58.15:58,0,418	0/0:49,0:11:23.37:0,23,417	0/0:43,0:14:35.78:0,36,582	0/0:27,0:27:81.28:0,81,1509	0/0:12,0:12:36.12:0,36,663	0/0:33,0:33:93.32:0,93,1731	0/0:42,0:32:75.24:0,75,1264	0/0:35,0:34:99:0,99,1830	0/0:39,0:39:99:0,111,2016	0/0:18,0:18:54.19:0,54,1004	0/0:15,0:15:39.10:0,39,682	0/0:30,0:29:84.29:0,84,1558	0/0:43,0:43:99:0,123,2284	0/1:33,7:36:99:186,0,1301	0/0:41,0:34:69.23:0,69,1201	0/0:37,0:37:99:0,102,1761	0/0:23,1:23:32.25:0,32,1040	0/0:14,0:9:27.09:0,27,505	0/0:30,0:29:78.26:0,78,1337	0/0:32,0:27:37.54:0,38,624	0/0:24,0:22:51.17:0,51,902	0/0:24,0:22:42.10:0,42,708	0/0:24,0:21:37.35:0,37,728	0/0:19,0:19:54.19:0,54,1011	0/0:39,0:32:93.26:0,93,1526	0/0:21,0:17:39.13:0,39,656	0/0:11,0:11:8.05:0,8,253
chr10	100837859	.	CTCCT	C	3473.80	PASS	AB=0.807;AC=13;AF=0.232;AN=56;BaseQRankSum=5.964;DP=800;FS=2.585;HRun=0;HaplotypeScore=158.9597;InbreedingCoeff=-0.1568;MQ=47.56;MQ0=17;MQRankSum=-3.505;QD=10.34;ReadPosRankSum=-1.394;VQSLOD=3.2255;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,5:35:99:184,0,1068	0/0:8,0:8:13.28:0,13,207	0/0:56,0:12:19.71:0,20,369	0/0:54,0:15:30.23:0,30,377	0/0:25,0:25:72.25:0,72,1720	0/0:13,0:12:33.11:0,33,851	0/0:37,0:37:99:0,102,2494	0/1:34,7:28:87.99:88,0,668	0/0:33,0:33:84.28:0,84,2016	0/0:39,0:39:99:0,111,2732	0/0:20,0:20:57.19:0,57,1329	0/0:15,0:15:13.58:0,14,115	0/0:32,0:32:93.32:0,93,2289	0/0:42,0:42:99:0,108,2586	0/1:32,0:31:14.45:14,0,905	0/1:14,19:27:99:555,0,193	0/0:34,0:34:87.25:0,87,2075	0/0:22,0:21:63.22:0,63,1530	0/1:23,6:18:99:282,0,425	0/1:16,11:25:99:648,0,280	0/1:23,5:23:99:177,0,362	0/1:23,0:22:42.89:43,0,438	0/0:19,0:19:13.75:0,14,261	0/1:16,9:25:99:372,0,307	0/0:13,0:13:36.12:0,36,833	0/1:20,16:30:99:708,0,487	0/1:9,7:13:99:296,0,174	1/1:5,4:9:3.42:106,3,0
chr10	100837863	.	T	TTCCTTC	4664.01	PASS	AB=0.926;AC=16;AF=0.286;AN=56;BaseQRankSum=4.989;DP=800;FS=21.150;HRun=0;HaplotypeScore=184.6358;InbreedingCoeff=0.6042;MQ=47.91;MQ0=19;MQRankSum=-6.142;QD=17.80;ReadPosRankSum=-4.581;VQSLOD=2.2351;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,9:38:59.32:1545,59,0	1/1:9,0:9:9.72:67,10,0	0/0:54,0:10:8.89:0,9,113	0/0:53,0:13:8.98:0,9,50	0/0:27,0:27:48.16:0,48,1016	0/0:15,0:14:36.10:0,36,651	0/0:36,0:36:90.18:0,90,1697	0/1:35,0:23:99:110,0,159	0/0:31,0:31:63.18:0,63,1245	0/0:40,0:40:87.12:0,87,1583	0/0:25,0:25:36.11:0,36,713	1/1:3,10:14:12.04:401,12,0	0/0:36,0:35:84.26:0,84,1676	0/0:42,0:42:78.27:0,78,1675	0/1:24,0:31:99:203,0,138	0/1:31,0:25:17.08:17,0,415	0/0:32,0:32:78.24:0,78,1559	0/0:23,0:22:48.11:0,48,930	0/1:26,0:17:92.18:92,0,115	0/0:22,0:22:20.88:0,21,429	0/0:28,0:23:21.14:0,21,299	1/1:1,22:23:30.06:758,30,0	1/1:4,16:22:15.52:501,16,0	1/1:18,5:25:45.11:969,45,0	0/0:14,0:14:18.04:0,18,346	0/0:33,0:28:50.86:0,51,630	0/0:13,0:11:17.09:0,17,214	0/0:8,0:8:8.96:0,9,90
chr10	100837907	.	T	TTC	1233.75	PASS	AB=0.831;AC=9;AF=0.167;AN=54;BaseQRankSum=9.293;DP=689;FS=8.795;HRun=0;HaplotypeScore=139.7094;InbreedingCoeff=0.3290;MQ=48.09;MQ0=24;MQRankSum=-7.466;QD=7.96;ReadPosRankSum=-3.410;VQSLOD=1.9050;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,2:37:3.69:4,0,1167	0/0:9,0:6:15.03:0,15,184	0/0:29,0:9:20.32:0,20,256	0/0:24,0:5:15.04:0,15,204	0/0:21,0:21:57.19:0,57,836	0/0:18,0:17:51.17:0,51,748	0/0:33,0:33:93.25:0,93,1321	0/0:23,0:16:33.27:0,33,539	0/0:23,0:22:60.20:0,60,880	0/0:36,0:35:87.28:0,87,1253	0/0:27,0:27:66.22:0,66,966	0/0:14,0:12:18.06:0,18,265	0/0:39,0:38:99:0,102,1486	0/0:32,0:32:90.22:0,90,1298	0/0:36,0:35:96.15:0,96,1255	1/1:17,6:22:23.99:303,24,0	0/0:41,0:42:82.31:0,82,1383	0/0:21,0:21:39.38:0,39,732	0/1:12,5:10:60.81:280,0,61	1/1:3,1:6:8.97:94,9,0	0/1:18,4:14:19.36:53,0,19	0/0:28,0:26:51.15:0,51,729	0/0:18,0:18:31.86:0,32,450	0/0:43,1:40:91.13:0,91,1363	0/0:14,0:14:36.12:0,36,530	0/1:11,6:23:79.34:399,0,79	0/1:10,4:13:26.69:245,0,27	./.
chr10	100837911	.	TTC	T	410.31	PASS	AB=0.911;AC=6;AF=0.111;AN=54;BaseQRankSum=7.155;DP=690;FS=10.793;HRun=0;HaplotypeScore=135.2190;InbreedingCoeff=0.1933;MQ=48.38;MQ0=24;MQRankSum=-5.587;QD=4.41;ReadPosRankSum=-2.738;VQSLOD=1.2917;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:36:99:0,102,1789	0/0:8,0:5:12.03:0,12,195	0/0:28,0:9:20.80:0,21,317	0/0:24,0:5:15.05:0,15,226	0/0:20,0:20:54.17:0,54,980	0/0:18,0:17:51.17:0,51,947	0/0:34,0:34:93.30:0,93,1675	0/0:29,0:20:52.57:0,53,801	0/0:25,0:24:72.25:0,72,1316	0/0:34,0:33:90.29:0,90,1578	0/0:28,0:28:81.28:0,81,1472	0/0:14,0:12:21.07:0,21,384	0/0:38,0:37:99:0,108,1895	0/0:33,0:33:99:0,99,1738	0/0:36,0:35:99:0,102,1712	0/1:23,2:21:55.14:125,0,55	0/0:41,0:41:61.35:0,61,1873	0/0:22,0:22:61.76:0,62,980	0/1:20,1:10:43.12:43,0,149	1/1:5,1:6:9.93:51,10,0	0/0:20,0:14:3.70:0,4,80	0/0:26,0:24:54.19:0,54,996	0/0:18,0:18:30.50:0,31,557	0/0:44,0:40:98.93:0,99,1770	0/0:15,0:15:42.14:0,42,770	0/1:24,2:24:99:240,0,154	0/1:12,3:12:46.98:76,0,47	./.
chr10	100837923	.	T	TTC	759.77	PASS	AB=0.830;AC=6;AF=0.111;AN=54;BaseQRankSum=1.453;DP=722;FS=0.715;HRun=0;HaplotypeScore=131.7672;InbreedingCoeff=-0.1348;MQ=48.49;MQ0=26;MQRankSum=-6.478;QD=4.52;ReadPosRankSum=-2.305;VQSLOD=2.1858;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:39:34.55:0,35,1271	0/0:7,0:4:12.04:0,12,176	0/0:19,0:7:11.01:0,11,127	0/0:17,0:2:6.02:0,6,85	0/0:21,0:21:51.13:0,51,720	0/0:20,0:19:48.16:0,48,707	0/0:35,0:35:93.01:0,93,1288	0/1:24,17:27:99:660,0,336	0/0:27,0:26:78.25:0,78,1129	0/0:32,0:32:87.25:0,87,1255	0/0:29,0:29:81.26:0,81,1165	0/0:19,0:17:30.10:0,30,435	0/0:36,0:35:99:0,102,1481	0/0:27,0:26:78.25:0,78,1129	0/0:37,0:37:90.77:0,91,1288	0/1:25,8:29:87.18:87,0,433	0/0:40,0:41:84.64:0,85,1527	0/0:18,0:18:10.38:0,10,505	0/1:17,3:9:37.34:37,0,165	0/0:18,0:17:39.05:0,39,501	0/1:23,2:17:26.79:27,0,100	0/0:26,0:25:60.20:0,60,876	0/0:17,0:17:33.55:0,34,486	0/0:44,0:42:31.96:0,32,1364	0/0:16,0:16:36.11:0,36,512	0/1:28,5:29:41.77:42,0,611	0/1:12,3:13:30.05:30,0,260	./.
chr10	100838174	.	TTCC	T	4317.80	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.060;DP=560;FS=0.414;HRun=0;HaplotypeScore=94.1607;InbreedingCoeff=0.9339;MQ=59.56;MQ0=0;MQRankSum=-3.640;QD=27.86;ReadPosRankSum=0.849;VQSLOD=5.0051;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,102,1982	1/1:1,5:6:12.02:175,12,0	0/0:18,0:13:14.06:0,14,257	0/0:32,0:26:2.99:0,3,779	0/0:23,0:22:57.16:0,57,1091	0/0:24,0:24:66.17:0,66,1230	0/0:23,0:23:32.45:0,32,1189	1/1:5,11:16:27.09:395,27,0	0/0:15,0:15:33.11:0,33,682	0/0:22,0:21:45.15:0,45,933	0/0:14,0:14:39.13:0,39,806	0/0:19,0:19:48.16:0,48,974	0/0:29,0:29:63.18:0,63,1217	0/0:18,0:18:45.15:0,45,920	1/1:4,21:25:69.23:1008,69,0	1/1:5,17:22:48.16:707,48,0	0/0:23,0:23:56.90:0,57,1094	0/0:18,0:18:34.95:0,35,826	1/1:5,7:11:21.06:286,21,0	1/1:5,6:9:12.04:177,12,0	1/1:2,8:10:21.07:298,21,0	0/0:15,0:15:36.12:0,36,721	0/0:19,0:19:36.12:0,36,719	0/0:37,0:35:84.25:0,84,1645	0/0:13,0:13:36.12:0,36,733	1/1:8,20:28:60.20:874,60,0	1/1:3,13:16:23.97:353,24,0	1/1:4,4:8:3.01:44,3,0
chr10	100838524	.	GAT	G	317.34	PASS	AB=0.833;AC=11;AF=0.306;AN=36;BaseQRankSum=1.914;DP=166;FS=8.354;HRun=0;HaplotypeScore=24.9032;InbreedingCoeff=0.2199;MQ=85.53;MQ0=3;MQRankSum=-0.953;QD=7.21;ReadPosRankSum=2.086;VQSLOD=1.2354;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:3:0,3,25	./.	0/0:11,0:8:0.53:0,1,2	0/0:18,0:7:0.67:0,1,2	0/0:8,0:8:9.02:0,9,122	0/1:8,4:12:83.23:83,0,209	0/0:3,0:3:5.69:0,6,59	0/0:11,0:11:2.23:0,2,46	1/1:1,1:2:3.01:36,3,0	1/1:3,0:3:2.80:13,3,0	0/1:6,0:6:29.71:30,0,36	./.	1/1:6,0:6:5.23:40,5,0	0/1:2,1:3:29.75:30,0,42	./.	./.	0/0:21,0:21:9.37:0,9,594	1/1:5,7:12:20.48:203,20,0	./.	./.	0/0:1,0:1:3:0,3,25	./.	./.	./.	0/0:9,0:9:18.05:0,18,259	0/0:3,0:2:1.25:0,1,3	./.	0/0:4,0:3:3:0,3,26
chr10	100839038	.	C	CAGAG	22869.88	PASS	AB=0.556;AC=29;AF=0.518;AN=56;BaseQRankSum=-16.844;DP=713;FS=8.512;HRun=0;HaplotypeScore=112.4062;InbreedingCoeff=0.9169;MQ=79.49;MQ0=1;MQRankSum=-5.065;QD=59.40;ReadPosRankSum=3.439;VQSLOD=6.6215;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,50:52:99:3422,129,0	1/1:0,13:11:24.08:640,24,0	0/0:20,0:20:41.08:0,41,744	0/0:21,0:21:57.11:0,57,964	0/0:28,0:28:66.20:0,66,1191	0/0:16,0:16:42.09:0,42,717	0/0:46,0:46:99:0,126,2280	1/1:7,18:27:78.24:1837,78,0	0/0:32,0:32:93.29:0,93,1654	0/0:25,0:25:69.19:0,69,1188	0/0:13,0:13:36.12:0,36,671	1/1:1,25:27:69.24:1835,69,0	0/0:22,0:22:63.18:0,63,1111	0/0:25,0:25:72.23:0,72,1306	1/1:0,29:30:72.25:1919,72,0	1/1:3,21:23:57.20:1517,57,0	0/0:30,0:30:90.31:0,90,1642	0/0:23,0:23:63.22:0,63,1174	1/1:6,13:20:54.14:1282,54,0	1/1:3,20:23:42.14:1119,42,0	1/1:4,33:37:66.23:1751,66,0	1/1:1,17:18:36.12:959,36,0	1/1:2,17:19:33.11:877,33,0	1/1:3,25:28:62.89:1677,63,0	0/0:27,0:27:78.23:0,78,1344	0/1:7,27:35:15.71:2120,0,16	1/1:2,23:27:66.23:1756,66,0	1/1:2,2:4:6.49:161,6,0
chr10	100839322	.	C	CCTCT	1219.61	PASS	AB=0.941;AC=35;AF=0.700;AN=50;BaseQRankSum=0.118;DP=539;FS=3.715;HRun=0;HaplotypeScore=125.4995;InbreedingCoeff=0.3169;MQ=57.23;MQ0=26;MQRankSum=-0.335;QD=3.26;ReadPosRankSum=-0.607;VQSLOD=2.4667;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:27:8.76:109,9,0	0/1:8,0:6:0.01:0,0,0	./.	./.	0/1:21,0:20:0.08:0,0,0	1/1:14,0:16:3.01:38,3,0	0/0:21,6:28:0.71:0,1,2	1/1:34,0:34:2.92:17,3,0	0/0:22,0:22:19.18:0,19,215	0/0:9,0:9:1.86:0,2,37	0/1:7,0:6:0:0,0,0	1/1:15,0:18:10.61:105,11,0	0/0:13,0:14:2.38:0,2,10	0/1:20,0:24:3.62:178,0,4	1/1:8,0:8:6.02:98,6,0	0/1:19,8:30:62:129,0,62	1/1:24,0:23:20.28:243,20,0	1/1:10,8:22:7.27:121,7,0	0/1:16,0:13:0:0,0,0	1/1:12,0:13:0.47:1,0,0	1/1:14,0:13:3.01:37,3,0	0/1:15,0:15:0:0,0,0	1/1:10,0:10:2.22:7,2,0	1/1:22,0:23:8.49:54,8,0	1/1:14,2:16:2.93:70,3,0	1/1:11,0:13:9.08:115,9,0	1/1:8,0:12:2.74:12,3,0	./.
chr10	100839354	.	T	TCTCTCC	1182.62	PASS	AB=0.943;AC=18;AF=0.321;AN=56;BaseQRankSum=3.525;DP=546;FS=15.246;HRun=0;HaplotypeScore=98.0508;InbreedingCoeff=0.3722;MQ=50.29;MQ0=38;MQRankSum=-0.825;QD=4.83;ReadPosRankSum=1.922;VQSLOD=0.9611;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,27:43:12.45:198,0,12	1/1:10,0:8:3.91:93,4,0	0/0:33,0:11:18.17:0,18,176	0/0:45,0:6:17.57:0,18,114	0/0:9,0:9:3.21:0,3,25	0/0:18,0:18:18.23:0,18,128	0/0:18,0:18:16.22:0,16,126	0/0:16,0:16:44.72:0,45,360	0/0:29,0:29:52.39:0,52,590	0/0:18,0:18:48.51:0,49,451	0/0:14,0:13:15.67:0,16,127	1/1:14,0:14:26.63:344,27,0	0/0:20,0:20:39.33:0,39,326	0/1:28,0:26:11.96:12,0,158	1/1:3,0:21:6.02:168,6,0	0/1:24,0:23:16.90:17,0,267	0/1:22,0:19:7.67:8,0,163	0/0:20,0:20:1.97:0,2,158	0/0:16,0:14:32.13:0,32,236	0/0:17,0:17:29.04:0,29,220	0/1:7,0:6:0.22:0,0,61	0/1:11,0:11:5.49:77,0,5	1/1:12,0:12:22.94:176,23,0	1/1:20,0:20:32.57:256,33,0	0/1:19,0:19:0.49:0,0,151	0/0:15,0:14:19.06:0,19,227	0/0:13,0:12:20.79:0,21,148	0/1:11,0:11:1.09:1,0,137
chr10	100841138	.	A	AG	13122.36	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=17.281;DP=534;FS=9.419;HRun=0;HaplotypeScore=97.1666;InbreedingCoeff=0.9986;MQ=70.93;MQ0=0;MQRankSum=-8.135;QD=46.04;ReadPosRankSum=-1.691;VQSLOD=3.0812;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:63.21:1005,63,0	1/1:3,12:15:39.13:622,39,0	0/0:10,0:10:27.03:0,27,319	0/0:9,0:9:21.51:0,22,274	0/0:34,0:34:99:0,102,1390	0/0:25,0:25:75.25:0,75,1046	0/0:16,0:16:48.16:0,48,671	1/1:2,28:30:90.29:1393,90,0	0/0:16,0:16:48.15:0,48,654	0/0:26,0:26:75.25:0,75,1046	0/0:28,0:28:81.27:0,81,1132	1/1:1,15:16:48.15:743,48,0	0/0:14,0:14:42.12:0,42,566	0/0:19,0:19:57.19:0,57,797	1/1:2,22:24:72.25:1147,72,0	1/1:0,17:17:51.17:813,51,0	0/0:28,0:28:81.25:0,81,1113	0/0:13,0:13:39.08:0,39,506	1/1:3,11:14:39.13:622,39,0	1/1:3,24:27:78.27:1237,78,0	1/1:0,7:7:21.07:335,21,0	1/1:0,12:12:36.12:558,36,0	1/1:0,14:14:42.14:670,42,0	1/1:0,13:13:39.13:622,39,0	0/0:11,0:11:33.10:0,33,445	1/1:1,32:33:57.36:1485,57,0	1/1:3,29:32:93.29:1438,93,0	1/1:0,9:9:27.09:431,27,0
chr10	100841171	.	TAC	T	554.76	PASS	AB=0.877;AC=6;AF=0.107;AN=56;BaseQRankSum=3.115;DP=559;FS=1.516;HRun=0;HaplotypeScore=150.4558;InbreedingCoeff=-0.1230;MQ=74.11;MQ0=0;MQRankSum=-4.617;QD=4.58;ReadPosRankSum=-7.030;VQSLOD=0.3763;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.19:0,54,1040	0/0:18,0:18:54.19:0,54,1026	0/0:14,0:14:39.08:0,39,665	0/0:14,0:14:32.97:0,33,555	0/0:37,0:37:99:0,111,2031	0/0:23,0:23:69.24:0,69,1281	0/0:18,0:18:51.17:0,51,985	0/1:15,9:24:99:371,0,150	0/0:18,0:18:54.17:0,54,999	0/0:32,0:32:93.32:0,93,1797	0/0:34,0:34:99:0,102,1968	0/0:13,0:13:39.13:0,39,748	0/0:18,0:18:54.19:0,54,1029	0/0:17,0:17:51.16:0,51,941	0/0:23,0:23:66.21:0,66,1205	0/1:17,1:18:23.31:23,0,220	0/0:33,0:33:96.33:0,96,1842	0/0:11,0:11:33.11:0,33,629	0/1:17,1:18:40.79:41,0,215	0/1:22,4:26:99:159,0,219	0/0:4,1:5:2.92:0,3,17	0/0:17,0:17:48.15:0,48,863	0/0:16,0:16:45.15:0,45,857	0/0:10,0:10:21.05:0,21,393	0/0:22,0:22:66.23:0,66,1258	0/0:27,0:27:46.34:0,46,422	0/1:28,2:30:56.83:57,0,320	0/1:4,1:5:28.04:28,0,28
chr10	100841173	.	C	CTAAT	10271.66	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=8.628;DP=548;FS=4.898;HRun=0;HaplotypeScore=138.0802;InbreedingCoeff=0.9489;MQ=72.40;MQ0=0;MQRankSum=-14.232;QD=70.84;ReadPosRankSum=-0.807;VQSLOD=6.5119;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.17:0,57,1139	0/0:18,0:18:54.16:0,54,1081	0/0:12,0:12:36.12:0,36,689	0/0:13,0:13:30.40:0,30,516	0/0:37,0:37:99:0,108,2167	0/0:23,0:23:69.19:0,69,1314	0/0:17,0:17:51.18:0,51,1063	1/1:14,10:24:66.15:1409,66,0	0/0:18,0:18:54.15:0,54,1036	0/0:31,0:31:93.32:0,93,1931	0/0:34,0:34:99:0,102,2092	0/0:13,0:13:39.13:0,39,807	0/0:18,0:18:54.17:0,54,1081	0/0:16,0:16:48.16:0,48,983	0/0:22,0:22:63.19:0,63,1227	1/1:1,17:18:54.19:1535,54,0	0/0:33,0:33:96.31:0,96,1965	0/0:11,0:11:33.11:0,33,675	1/1:5,12:18:54.09:1269,54,0	1/1:8,19:27:81.09:1907,81,0	1/1:1,1:2:3.01:86,3,0	0/0:19,0:19:51.08:0,51,920	0/0:17,0:17:47.75:0,48,918	0/0:10,0:10:21.01:0,21,391	0/0:22,0:22:66.23:0,66,1339	1/1:3,24:27:15.33:1983,15,0	1/1:5,20:26:78.21:1959,78,0	1/1:2,1:3:6.02:124,6,0
chr10	100841184	.	GA	G	5972.25	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=16.987;DP=539;FS=0.000;HRun=9;HaplotypeScore=115.0459;InbreedingCoeff=0.9761;MQ=74.46;MQ0=0;MQRankSum=-14.377;QD=23.24;ReadPosRankSum=-1.430;VQSLOD=3.5348;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,12:18:29.98:268,30,0	1/1:1,14:15:42.02:384,42,0	0/0:14,0:14:32.65:0,33,334	0/0:14,0:13:27.04:0,27,308	0/0:36,0:36:96.29:0,96,1108	0/0:17,0:17:45.12:0,45,510	0/0:16,0:16:45.10:0,45,506	1/1:4,20:24:60.02:549,60,0	0/0:15,0:15:39.12:0,39,450	0/0:31,0:32:87.08:0,87,976	0/0:30,0:30:84.25:0,84,969	1/1:3,12:15:36.01:329,36,0	0/0:19,0:19:54.16:0,54,621	0/0:19,0:19:51.15:0,51,588	1/1:1,18:19:54.03:494,54,0	1/1:0,16:16:48.03:439,48,0	0/0:32,0:32:93.28:0,93,1072	0/0:12,0:12:33.06:0,33,367	1/1:2,16:18:48.01:435,48,0	1/1:3,24:27:72.04:658,72,0	1/1:0,5:5:9:82,9,0	1/1:0,16:16:45.02:412,45,0	1/1:2,20:22:53.94:494,54,0	1/1:1,8:9:17.82:164,18,0	0/0:26,0:26:78.23:0,78,900	1/1:4,21:25:63.03:576,63,0	1/1:2,23:25:69.04:631,69,0	1/1:1,2:3:6:55,6,0
chr10	100842649	.	GGTGCAT	G	3500.08	PASS	AB=0.631;AC=26;AF=0.481;AN=54;BaseQRankSum=11.812;DP=479;FS=0.000;HRun=0;HaplotypeScore=130.4774;InbreedingCoeff=0.7866;MQ=68.24;MQ0=1;MQRankSum=-8.498;QD=14.89;ReadPosRankSum=-1.115;VQSLOD=2.9479;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,11:20:9.03:134,9,0	1/1:2,6:8:12.04:211,12,0	0/0:18,0:14:24.73:0,25,517	0/0:21,0:19:32.29:0,32,948	0/0:7,0:7:15.05:0,15,503	0/0:13,0:13:27.09:0,27,805	0/0:21,0:21:57.15:0,57,1512	1/1:8,14:22:38.59:393,39,0	0/0:12,0:12:30.10:0,30,683	0/0:27,0:27:66.21:0,66,1921	0/0:14,0:14:27:0,27,786	1/1:5,13:18:18.06:351,18,0	0/0:12,0:12:30.10:0,30,911	0/0:11,0:11:33.11:0,33,1055	1/1:3,7:10:3.01:53,3,0	1/1:4,8:12:21.07:334,21,0	0/0:31,0:31:69.17:0,69,2004	0/0:16,0:16:39.13:0,39,1245	1/1:4,8:12:26.99:466,27,0	1/1:4,17:21:6.02:86,6,0	1/1:14,24:38:6.02:116,6,0	0/1:7,7:14:0.16:31,0,0	1/1:3,4:7:9.02:144,9,0	./.	0/0:17,0:17:45.15:0,45,1438	0/1:8,17:25:49.84:828,0,50	1/1:3,8:11:5.50:127,6,0	1/1:7,10:17:12.04:227,12,0
chr10	100843291	.	T	TAAA	2227.36	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.411;DP=474;FS=4.192;HRun=8;HaplotypeScore=115.4060;InbreedingCoeff=0.9144;MQ=65.47;MQ0=1;MQRankSum=-8.710;QD=33.24;ReadPosRankSum=-3.454;VQSLOD=1.9715;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:14:32.98:329,33,0	0/0:11,0:11:33.02:0,33,317	0/0:8,0:7:8.49:0,8,86	0/0:3,0:3:3:0,3,39	0/0:31,0:31:75.20:0,75,968	0/0:16,0:16:42.11:0,42,552	0/0:14,0:14:39.13:0,39,512	0/0:27,0:31:75.73:0,76,418	0/0:20,0:20:54.15:0,54,694	0/0:24,0:24:57.16:0,57,749	0/0:33,0:33:84.26:0,84,1103	1/1:7,8:16:39.13:671,39,0	0/0:13,0:13:33.09:0,33,433	0/0:10,0:10:27.07:0,27,340	0/0:16,0:16:25.74:0,26,300	0/0:12,0:12:28.41:0,28,141	0/0:21,0:21:54.17:0,54,709	0/0:22,0:22:47.33:0,47,578	0/0:11,0:16:16.39:0,16,136	0/0:22,0:24:55.78:0,56,272	0/0:6,0:6:13.93:0,14,64	1/1:6,5:11:18.03:271,18,0	1/1:7,14:22:52:949,52,0	1/1:2,2:4:9.03:176,9,0	0/0:20,0:20:54.16:0,54,707	0/0:22,0:22:50.83:0,51,282	0/0:25,0:28:47.06:0,47,239	0/0:5,0:5:10.89:0,11,46
chr10	100843298	.	A	AT	4975.14	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=12.171;DP=455;FS=18.171;HRun=0;HaplotypeScore=82.0205;InbreedingCoeff=0.8263;MQ=68.98;MQ0=1;MQRankSum=-2.048;QD=24.63;ReadPosRankSum=-1.010;VQSLOD=3.8683;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:27.60:28,0,46	0/0:12,0:12:31.72:0,32,213	0/0:10,0:9:9.77:0,10,116	0/0:4,0:4:6.01:0,6,66	0/0:27,0:27:81.25:0,81,1080	0/0:18,0:18:50.18:0,50,646	0/0:13,0:13:39.13:0,39,544	1/1:5,29:34:87.56:1121,88,0	0/0:18,0:18:54.18:0,54,746	0/0:21,0:21:63.19:0,63,849	0/0:32,0:32:96.29:0,96,1275	1/1:14,0:14:16.34:100,16,0	0/0:13,0:13:36.11:0,36,487	0/0:10,0:10:30.06:0,30,396	0/0:16,0:16:9.17:0,9,151	1/1:0,10:10:30.09:415,30,0	0/0:22,0:22:63.17:0,63,828	0/0:18,0:18:51.61:0,52,681	1/1:8,9:16:34.34:344,34,0	1/1:3,22:25:61.83:803,62,0	1/1:0,5:5:15.05:216,15,0	1/1:9,0:9:2.93:49,3,0	1/1:19,0:20:8.87:106,9,0	1/1:3,0:3:1.60:23,2,0	0/0:19,0:19:57.18:0,57,775	1/1:2,19:21:18.23:731,18,0	1/1:3,22:24:65.69:867,66,0	1/1:0,5:5:12.04:172,12,0
chr10	100843301	.	A	ATT	7718.22	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=11.152;DP=456;FS=3.809;HRun=7;HaplotypeScore=81.4050;InbreedingCoeff=0.9452;MQ=65.95;MQ0=1;MQRankSum=-2.049;QD=33.85;ReadPosRankSum=-2.360;VQSLOD=4.4841;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,9:13:23.58:302,24,0	1/1:2,10:12:30.06:463,30,0	0/0:8,0:7:4.90:0,5,83	0/0:3,0:3:5.22:0,5,33	0/0:28,0:28:75.20:0,75,861	0/0:19,0:19:54.09:0,54,602	0/0:13,0:13:36.11:0,36,419	1/1:35,0:35:93.18:1249,93,0	0/0:17,0:17:42.12:0,42,489	0/0:21,0:21:57.16:0,57,655	0/0:32,0:32:90.24:0,90,1027	1/1:2,12:14:33.58:524,34,0	0/0:14,0:14:24.05:0,24,280	0/0:10,0:10:27.08:0,27,313	1/1:0,17:17:42.14:688,42,0	1/1:12,0:12:33.09:429,33,0	0/0:23,0:23:57.14:0,57,650	0/0:19,0:19:48.09:0,48,544	1/1:16,0:15:13.43:385,13,0	1/1:25,0:25:63.15:820,63,0	1/1:5,0:5:15.05:206,15,0	1/1:4,3:7:18:237,18,0	1/1:7,12:19:44.47:632,44,0	1/1:2,1:3:8.51:92,9,0	0/0:21,0:21:54.12:0,54,607	1/1:20,1:21:24.81:757,25,0	1/1:24,0:23:63.10:772,63,0	1/1:5,0:5:12.04:163,12,0
chr10	100843554	.	G	GGCT	10236.40	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-11.043;DP=544;FS=2.217;HRun=0;HaplotypeScore=86.3809;InbreedingCoeff=0.9787;MQ=88.00;MQ0=0;MQRankSum=-4.522;QD=37.91;ReadPosRankSum=0.827;VQSLOD=5.8087;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,16:30:57.15:1182,57,0	1/1:0,11:11:27.09:601,27,0	0/0:18,0:18:37.99:0,38,690	0/0:23,0:23:56.98:0,57,760	0/0:27,0:27:48.11:0,48,729	0/0:21,0:21:51.17:0,51,831	0/0:23,0:23:69.23:0,69,1100	1/1:11,21:35:66.12:1116,66,0	0/0:21,0:21:60.20:0,60,976	0/0:22,0:22:33.09:0,33,474	0/0:16,0:16:36.09:0,36,558	1/1:2,11:13:21.07:468,21,0	0/0:21,0:21:45.10:0,45,681	0/0:21,0:21:51.16:0,51,807	1/1:5,15:20:39.13:868,39,0	1/1:1,16:19:42.14:935,42,0	0/0:30,0:30:84.25:0,84,1342	0/0:10,0:10:30.09:0,30,464	1/1:6,8:14:32.99:608,33,0	1/1:8,8:16:17.94:304,18,0	1/1:5,12:17:21.07:469,21,0	1/1:9,3:14:6.02:134,6,0	1/1:4,5:10:15.05:332,15,0	1/1:8,12:20:41.90:816,42,0	0/0:21,0:21:48.07:0,48,682	1/1:6,10:17:30.09:610,30,0	1/1:3,26:29:66.23:1461,66,0	1/1:0,5:5:15.05:332,15,0
chr10	100843668	.	GTT	G	4990.32	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=14.139;DP=588;FS=4.522;HRun=8;HaplotypeScore=89.8251;InbreedingCoeff=0.6519;MQ=69.18;MQ0=1;MQRankSum=-4.562;QD=16.69;ReadPosRankSum=2.543;VQSLOD=2.8705;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:78.24:951,78,0	1/1:0,14:14:33.10:402,33,0	0/0:18,0:13:27.07:0,27,372	0/0:22,0:18:36.10:0,36,534	0/0:26,0:26:78.27:0,78,1308	0/0:26,0:26:69.22:0,69,1123	0/0:16,0:16:42.13:0,42,682	0/1:32,0:32:6.43:89,0,6	0/0:15,0:15:39.13:0,39,652	0/0:20,0:20:57.19:0,57,956	0/0:20,0:20:57.19:0,57,952	1/1:0,15:15:39.12:474,39,0	0/0:24,0:24:69.24:0,69,1158	0/0:25,0:25:69.24:0,69,1155	1/1:0,25:25:57.18:695,57,0	1/1:6,0:6:7.49:26,7,0	0/0:35,0:35:96.33:0,96,1613	0/0:13,0:13:33.11:0,33,547	0/1:15,0:15:26.38:26,0,32	0/1:22,0:22:13.39:90,0,13	1/1:12,0:12:15.11:69,15,0	1/1:1,19:20:51.15:615,51,0	1/1:0,21:21:57.18:694,57,0	1/1:0,28:28:54.17:655,54,0	0/0:28,0:28:81.25:0,81,1290	0/1:21,0:21:67.45:67,0,86	0/1:18,0:18:8.15:51,0,8	1/1:21,0:21:24.38:84,24,0
chr10	100843673	.	TTTTG	T	5230.43	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=3.380;DP=584;FS=0.000;HRun=0;HaplotypeScore=113.0693;InbreedingCoeff=0.9894;MQ=67.10;MQ0=1;MQRankSum=-4.125;QD=37.63;ReadPosRankSum=-1.646;VQSLOD=4.5681;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.46:0,78,446	0/0:14,0:14:34.85:0,35,196	0/0:20,0:15:33.07:0,33,552	0/0:21,0:16:35.08:0,35,663	0/0:28,0:28:84.24:0,84,1904	0/0:25,0:25:72.19:0,72,1514	0/0:16,0:16:45.13:0,45,1025	1/1:0,30:30:87.21:1270,87,0	0/0:15,0:15:45.12:0,45,973	0/0:21,0:21:63:0,63,1350	0/0:20,0:20:60.19:0,60,1393	0/0:16,0:16:40.77:0,41,237	0/0:23,0:23:69.19:0,69,1642	0/0:25,0:25:72.25:0,72,1749	0/0:26,0:26:56.43:0,56,324	1/1:0,6:6:9.03:160,9,0	0/0:34,0:34:99:0,102,2272	0/0:15,0:15:42:0,42,786	1/1:1,14:15:30.17:541,30,0	1/1:1,21:22:54.18:923,54,0	1/1:0,12:12:30.10:516,30,0	0/0:20,0:20:30.47:0,30,226	0/0:22,0:22:57.93:0,58,345	0/0:28,0:28:49.36:0,49,267	0/0:28,0:28:72.20:0,72,1620	1/1:4,17:21:23.64:754,24,0	1/1:3,13:16:30.10:515,30,0	1/1:0,17:17:33.07:551,33,0
chr10	100843900	.	G	GGACACTCGAGGAGATGTGCTT	70839.43	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=5.103;DP=703;FS=0.935;HRun=0;HaplotypeScore=340.2886;InbreedingCoeff=0.9983;MQ=77.47;MQ0=0;MQRankSum=-20.144;QD=181.18;ReadPosRankSum=-2.027;VQSLOD=3.9382;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,5:33:66.23:5538,66,0	1/1:6,2:9:22.32:1579,22,0	0/0:19,0:19:45.14:0,45,2095	0/0:25,0:25:63.21:0,63,2805	0/0:32,0:32:96.29:0,96,4230	0/0:26,0:26:78.25:0,78,4120	0/0:22,0:22:48.14:0,48,2346	1/1:50,0:50:99:9150,144,0	0/0:27,0:27:78.23:0,78,4148	0/0:25,0:25:60.21:0,60,3362	0/0:8,0:8:21.06:0,21,865	1/1:15,8:27:66.23:5696,66,0	0/0:25,0:25:75.24:0,75,3642	0/0:27,0:27:78.25:0,78,4017	1/1:32,12:49:99:10365,126,0	1/1:18,7:29:72.25:5871,72,0	0/0:38,0:38:99:0,111,6367	0/0:20,0:20:51.14:0,51,2457	1/1:16,3:20:57.20:3543,57,0	1/1:17,4:24:60.12:4228,60,0	1/1:15,1:17:27.01:2014,27,0	1/1:13,6:21:51.13:3752,51,0	1/1:13,2:19:35.99:2652,36,0	1/1:15,4:24:36.04:2726,36,0	0/0:18,0:18:50.03:0,50,2805	1/1:20,7:30:78.27:5636,78,0	1/1:18,11:30:84.20:6291,84,0	1/1:6,2:8:21.07:1797,21,0
chr10	100844442	.	T	TA	6799.34	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-8.093;DP=592;FS=0.696;HRun=4;HaplotypeScore=54.5078;InbreedingCoeff=0.9986;MQ=78.40;MQ0=1;MQRankSum=-3.048;QD=35.05;ReadPosRankSum=-0.826;VQSLOD=4.8593;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.13:0,81,890	0/0:8,0:8:24.07:0,24,272	0/0:16,0:16:45.07:0,45,493	0/0:13,0:13:24.06:0,24,271	0/0:29,0:29:81.21:0,81,906	0/0:21,0:21:54.14:0,54,603	0/0:11,0:11:24.07:0,24,272	1/1:8,36:43:97.39:1432,97,0	0/0:25,0:25:72.21:0,72,817	0/0:23,0:23:69.20:0,69,783	0/0:23,0:23:66.17:0,66,739	0/0:18,0:18:48.12:0,48,534	0/0:16,0:16:48.14:0,48,545	0/0:19,0:19:51.14:0,51,579	0/0:24,0:24:72.21:0,72,817	1/1:0,11:11:33.11:451,33,0	0/0:27,0:27:75.19:0,75,839	0/0:25,0:24:60.17:0,60,679	1/1:2,16:17:45.12:583,45,0	1/1:4,25:29:78.26:1058,78,0	1/1:0,12:12:36.12:492,36,0	0/0:18,0:18:48.12:0,48,533	0/0:18,0:18:45.13:0,45,510	0/0:8,0:8:24.07:0,24,272	0/0:29,0:29:84.24:0,84,953	1/1:3,27:30:47.21:1017,47,0	1/1:3,26:29:69.23:944,69,0	1/1:0,21:21:60.20:821,60,0
chr10	100844672	.	GA	G	5780.23	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=13.554;DP=556;FS=4.576;HRun=10;HaplotypeScore=67.8813;InbreedingCoeff=0.9934;MQ=73.01;MQ0=1;MQRankSum=-1.537;QD=20.94;ReadPosRankSum=0.468;VQSLOD=5.8485;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:86.91:746,87,0	1/1:1,6:8:14.03:110,14,0	0/0:17,0:15:21.22:0,21,320	0/0:18,0:15:28.49:0,28,316	0/0:30,1:31:52.16:0,52,803	0/0:29,0:29:72.19:0,72,796	0/0:18,0:18:54.15:0,54,597	1/1:5,30:35:89.91:768,90,0	0/0:15,0:16:29.90:0,30,304	0/0:26,0:26:72.19:0,72,785	0/0:20,0:20:42.07:0,42,451	1/1:1,13:14:38.99:339,39,0	0/0:21,0:21:60.11:0,60,635	0/0:18,0:18:48.13:0,48,531	1/1:2,10:12:29.99:260,30,0	1/1:2,9:11:26.99:234,27,0	0/0:22,0:22:60.16:0,60,664	0/0:22,0:22:59.80:0,60,628	1/1:7,19:27:61.93:514,62,0	1/1:2,14:16:41.99:365,42,0	1/1:1,7:8:14.99:130,15,0	1/1:0,14:14:35.99:312,36,0	1/1:2,19:21:47.68:416,48,0	1/1:0,16:16:38.99:339,39,0	0/0:19,0:20:53.97:0,54,570	1/1:3,17:20:20.80:406,21,0	1/1:6,24:31:68.02:579,68,0	1/1:1,10:11:29.99:260,30,0
chr10	100845772	.	TACAC	T	2895.14	PASS	AB=0.848;AC=15;AF=0.278;AN=54;BaseQRankSum=4.073;DP=738;FS=26.510;HRun=0;HaplotypeScore=163.4010;InbreedingCoeff=0.8702;MQ=65.10;MQ0=2;MQRankSum=-3.078;QD=17.55;ReadPosRankSum=0.574;VQSLOD=1.8342;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:53.34:0,53,1091	0/0:12,0:12:33.11:0,33,831	0/0:36,0:25:16.55:0,17,585	0/0:25,0:21:35.91:0,36,676	0/0:28,0:27:66.20:0,66,1576	0/0:26,0:25:61.76:0,62,1483	0/0:26,0:26:63.14:0,63,1328	1/1:20,8:24:42.12:662,42,0	0/0:21,0:21:48.15:0,48,1124	0/0:45,0:45:99:0,114,2688	0/0:28,0:28:72.25:0,72,1777	0/0:32,0:32:18.82:0,19,334	0/0:23,0:23:51.17:0,51,1201	0/0:22,0:22:63.22:0,63,1562	0/0:51,0:50:99:0,108,2604	1/1:14,3:17:23.82:370,24,0	0/0:25,0:25:57.20:0,57,1394	0/0:31,0:31:78.16:0,78,1564	1/1:15,2:16:24.07:352,24,0	1/1:26,3:28:18.04:259,18,0	1/1:25,3:24:29.54:363,30,0	0/0:22,0:21:36.12:0,36,867	./.	0/0:38,0:37:45.05:0,45,956	0/0:24,0:24:54.16:0,54,1233	0/1:23,5:25:18.45:726,0,18	1/1:13,2:15:21.07:303,21,0	1/1:3,0:3:3.01:51,3,0
chr10	100845788	.	CAT	C	1300.92	PASS	AB=0.919;AC=16;AF=0.286;AN=56;BaseQRankSum=11.079;DP=795;FS=23.240;HRun=0;HaplotypeScore=163.9901;InbreedingCoeff=0.4059;MQ=50.14;MQ0=9;MQRankSum=-6.624;QD=4.75;ReadPosRankSum=-3.170;VQSLOD=0.7039;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:40,2:41:53.75:54,0,497	0/0:14,0:12:33.11:0,33,578	0/1:33,0:14:50.22:50,0,239	0/1:28,0:13:32.66:33,0,327	0/0:31,0:29:65.77:0,66,1188	0/0:30,0:29:74.63:0,75,1147	0/0:36,0:34:83.44:0,83,993	0/1:29,0:25:18.20:172,0,18	0/0:23,0:23:59.66:0,60,895	0/0:47,1:48:99:0,114,1997	0/0:27,0:27:75.23:0,75,1310	0/0:31,0:31:14.93:0,15,151	0/0:25,0:25:65.04:0,65,1005	0/0:29,0:29:59.70:0,60,1175	0/0:52,0:51:99:0,123,1958	1/1:11,9:20:15.81:131,16,0	0/0:26,0:26:70.98:0,71,1087	0/0:32,0:32:43.38:0,43,898	1/1:15,1:13:0.51:133,1,0	0/1:18,11:28:0.58:80,0,1	1/1:23,2:21:16.21:126,16,0	0/0:22,1:21:14.12:0,14,416	0/0:21,0:20:0.47:0,0,1	0/0:44,1:43:6.27:0,6,385	0/0:27,1:28:22.08:0,22,918	0/1:29,7:32:45.46:404,0,45	1/1:10,5:15:26.82:261,27,0	1/1:0,1:1:3:28,3,0
chr10	100845790	.	T	TACAC	2007.53	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=4.059;DP=783;FS=4.818;HRun=0;HaplotypeScore=186.5633;InbreedingCoeff=0.7670;MQ=49.72;MQ0=10;MQRankSum=0.675;QD=11.81;ReadPosRankSum=-0.094;VQSLOD=2.8740;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,4:41:35.45:612,35,0	0/0:14,0:12:27.06:0,27,404	0/1:29,0:10:4.92:5,0,167	0/0:26,0:12:15.05:0,15,236	0/0:31,0:29:80.25:0,80,1200	0/0:31,0:30:74.03:0,74,1123	0/0:35,0:33:65.71:0,66,914	0/0:27,0:23:46.20:0,46,435	0/0:23,0:23:56.98:0,57,899	0/0:47,0:47:99:0,126,1956	0/0:28,0:28:69.20:0,69,1104	1/1:30,0:32:8.71:177,9,0	0/0:24,0:24:63.08:0,63,979	0/0:30,0:30:84.32:0,84,1299	0/0:50,0:49:99:0,109,1771	0/0:20,0:20:21.48:0,21,249	0/0:27,0:27:68.49:0,68,1069	0/0:30,0:30:49.59:0,50,706	0/0:14,0:11:8.26:0,8,155	0/0:29,0:28:12.45:0,12,135	0/0:24,0:20:14.93:0,15,119	1/1:21,2:21:33.08:654,33,0	0/0:21,0:20:0:0,0,1	1/1:41,2:42:38.83:714,39,0	0/0:29,0:29:65.30:0,65,964	0/0:35,0:31:47.46:0,47,416	0/0:16,0:16:7.43:0,7,121	0/0:2,0:1:2.99:0,3,24
chr10	100845800	.	C	CACACAGAG	4136.88	PASS	AB=0.901;AC=19;AF=0.339;AN=56;BaseQRankSum=5.402;DP=793;FS=19.132;HRun=0;HaplotypeScore=244.9597;InbreedingCoeff=0.3134;MQ=49.79;MQ0=10;MQRankSum=-0.300;QD=11.27;ReadPosRankSum=-2.377;VQSLOD=1.0693;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:39,2:40:52.34:990,52,0	0/0:15,0:13:33.07:0,33,651	0/1:17,0:5:4.92:5,0,167	0/0:20,0:6:15.05:0,15,236	0/0:30,0:29:84.24:0,84,1911	0/0:30,0:30:75.05:0,75,1717	0/0:35,0:33:87.20:0,87,1775	0/1:23,0:21:99:133,0,295	0/0:21,0:22:57.20:0,57,1435	0/0:46,0:48:99:0,135,2900	0/0:26,0:26:75.24:0,75,1755	1/1:6,26:37:8.99:255,9,0	0/0:28,0:28:78.21:0,78,1711	0/0:29,0:31:90.31:0,90,2224	0/0:48,0:48:99:0,115,2704	0/1:23,0:23:76.78:77,0,175	0/0:28,0:28:74.48:0,74,1722	0/0:28,0:29:9.73:0,10,1118	0/1:15,0:12:99:212,0,112	0/1:25,0:27:0.86:1,0,98	0/1:26,0:25:52.39:59,0,52	1/1:23,0:21:38.97:916,39,0	0/1:0,24:28:0:0,0,0	1/1:39,2:43:51.12:1209,51,0	0/0:33,0:33:38.24:0,38,1551	0/1:31,0:31:99:140,0,294	0/1:17,0:18:65.34:139,0,65	1/1:2,0:1:0.47:1,0,0
chr10	100845836	.	CAG	C	1826.40	PASS	AB=0.812;AC=12;AF=0.214;AN=56;BaseQRankSum=9.643;DP=774;FS=8.175;HRun=0;HaplotypeScore=165.1826;InbreedingCoeff=0.0453;MQ=49.00;MQ0=29;MQRankSum=-3.626;QD=7.74;ReadPosRankSum=-1.846;VQSLOD=2.6503;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:49.97:0,50,852	0/1:13,0:11:42.16:87,0,42	0/0:10,0:1:3.01:0,3,33	0/0:28,0:3:2.80:0,3,37	0/0:28,0:28:78.02:0,78,1185	0/0:30,0:29:71.96:0,72,1094	0/0:45,0:42:99:0,113,1708	0/1:22,8:22:29.60:379,0,30	0/0:30,0:30:53.24:0,53,1355	0/0:31,0:32:75.11:0,75,1331	0/0:22,0:22:62.80:0,63,918	0/0:31,0:31:28.56:0,29,514	0/0:36,1:37:41.91:0,42,1516	0/0:31,0:31:83.68:0,84,1279	0/1:36,0:35:74.17:170,0,74	0/1:9,10:19:21.71:145,0,22	0/0:37,0:37:88.97:0,89,1530	0/0:21,0:21:19.80:0,20,663	0/1:15,6:14:98.39:207,0,98	1/1:17,5:22:8.89:297,9,0	0/1:31,18:43:43.65:362,0,44	0/0:21,0:19:21.04:0,21,366	0/0:30,0:29:23.29:0,23,362	0/0:45,0:43:43.84:0,44,710	0/0:27,0:27:62.60:0,63,1051	0/1:17,7:21:99:215,0,149	0/1:14,6:19:92.15:92,0,93	1/1:1,1:1:3:25,3,0
chr10	100845838	.	G	GAC	3669.47	PASS	AB=0.964;AC=16;AF=0.286;AN=56;BaseQRankSum=6.311;DP=784;FS=6.891;HRun=0;HaplotypeScore=165.5839;InbreedingCoeff=0.6975;MQ=49.01;MQ0=30;MQRankSum=-7.235;QD=17.81;ReadPosRankSum=-4.404;VQSLOD=2.4327;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:16.27:0,16,481	0/1:6,0:11:18.90:19,0,49	0/0:11,0:1:2.97:0,3,20	0/0:26,0:3:3:0,3,37	0/0:30,0:30:60.12:0,60,695	0/0:30,0:29:57.77:0,58,690	0/0:45,0:42:84.34:0,84,1100	1/1:29,2:23:42.05:555,42,0	0/0:30,0:30:81.24:0,81,915	0/0:31,0:31:60.15:0,60,721	0/0:21,0:21:47.76:0,48,541	0/0:33,0:33:28.52:0,29,342	0/0:36,0:36:49:0,49,1036	0/0:29,0:29:69.20:0,69,827	0/0:17,0:34:8.37:0,8,142	1/1:13,5:18:27.08:375,27,0	0/0:39,0:39:86.71:0,87,1090	0/0:20,0:22:29.68:0,30,450	1/1:20,3:16:41.82:548,42,0	1/1:16,6:22:33.99:479,34,0	1/1:38,11:44:3.41:663,3,0	0/0:21,0:19:18.05:0,18,210	0/0:31,0:30:19.49:0,19,286	0/0:46,0:44:38.35:0,38,379	0/0:26,0:26:54.17:0,54,664	0/1:24,2:23:43.77:441,0,44	1/1:13,8:20:35.71:542,36,0	1/1:2,0:1:3.01:49,3,0
chr10	100845913	.	C	CACAG	8530.23	PASS	AB=0.843;AC=25;AF=0.446;AN=56;BaseQRankSum=-5.752;DP=936;FS=0.000;HRun=0;HaplotypeScore=189.2756;InbreedingCoeff=0.5247;MQ=47.29;MQ0=49;MQRankSum=-2.779;QD=17.06;ReadPosRankSum=1.964;VQSLOD=4.0407;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,39:43:38.89:1004,39,0	1/1:5,10:14:6.02:158,6,0	0/0:25,0:2:6.02:0,6,109	0/0:37,0:5:10.28:0,10,150	0/0:27,0:27:81.16:0,81,1359	0/0:22,0:22:63.16:0,63,1048	0/0:48,0:46:99:0,121,2121	0/1:34,5:20:99:414,0,120	0/0:29,0:29:77.23:0,77,1367	0/0:37,0:36:96.31:0,96,1675	0/0:35,0:35:87.19:0,87,1437	1/1:5,40:47:29.48:748,29,0	0/0:33,0:33:90.15:0,90,1464	0/0:33,0:32:87.28:0,87,1547	1/1:4,47:52:72.17:1781,72,0	0/1:23,10:31:58.84:109,0,59	0/0:45,0:45:99:0,112,2046	0/0:32,1:33:0.98:0,1,1166	0/1:29,4:16:63.28:372,0,63	0/1:15,3:17:5.32:310,0,5	1/1:50,10:45:1.07:76,1,0	1/1:0,14:13:15.02:396,15,0	1/1:5,2:6:11.75:285,12,0	1/1:8,56:62:49.12:1493,49,0	0/0:31,0:31:83.77:0,84,1473	0/1:30,9:33:99:645,0,294	1/1:11,14:22:29.99:723,30,0	1/1:2,0:2:2.90:16,3,0
chr10	100845917	.	G	GAC	2741.94	PASS	AB=0.996;AC=20;AF=0.357;AN=56;BaseQRankSum=13.407;DP=928;FS=0.372;HRun=0;HaplotypeScore=185.3018;InbreedingCoeff=0.1817;MQ=47.47;MQ0=42;MQRankSum=-0.703;QD=5.69;ReadPosRankSum=3.280;VQSLOD=2.8946;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:46,0:42:3.99:283,0,4	0/1:15,0:14:36.53:37,0,56	0/0:20,0:2:6.02:0,6,84	0/0:41,0:5:10.28:0,10,140	0/0:30,0:30:87.24:0,87,1239	0/0:23,0:23:66.19:0,66,933	0/0:50,0:48:99:0,132,1934	0/1:35,0:17:99:154,0,129	0/0:30,0:30:78.24:0,78,1145	0/0:39,0:38:99:0,105,1548	0/0:31,0:31:86.96:0,87,1277	0/1:45,1:46:33.84:292,0,34	0/0:34,0:34:99:0,99,1431	0/0:36,0:35:99:0,99,1460	1/1:55,0:53:18.95:499,19,0	0/1:32,0:30:35.60:94,0,36	0/0:44,0:44:84.94:0,85,1651	0/0:35,0:35:59.27:0,59,1078	0/1:33,0:16:53.84:166,0,54	0/1:17,0:16:5.68:161,0,6	1/1:51,2:38:0.47:52,0,0	0/1:14,0:13:19.57:100,0,20	1/1:6,0:6:11.89:97,12,0	0/1:65,0:62:53.95:410,0,54	0/0:32,0:32:77.42:0,77,1267	0/1:34,0:28:99:227,0,161	1/1:25,1:22:32.54:316,33,0	1/1:3,0:3:5.83:34,6,0
chr10	100845931	.	GAC	G	925.05	PASS	AB=0.793;AC=9;AF=0.161;AN=56;BaseQRankSum=9.750;DP=909;FS=1.299;HRun=0;HaplotypeScore=180.4387;InbreedingCoeff=0.1745;MQ=49.72;MQ0=28;MQRankSum=-8.208;QD=4.72;ReadPosRankSum=-4.355;VQSLOD=2.0787;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,1:43:50.28:0,50,760	0/0:15,0:14:19.46:0,19,306	0/0:12,0:2:5.84:0,6,38	0/0:42,0:7:0.64:0,1,81	0/0:30,0:30:78.25:0,78,1267	0/0:22,0:22:60.17:0,60,943	0/0:46,0:44:96.09:0,96,1584	0/1:35,3:24:99:256,0,149	0/0:35,0:35:93.28:0,93,1480	0/0:37,0:37:90.08:0,90,1443	0/0:26,0:26:69.21:0,69,1119	0/0:50,0:49:60.18:0,60,924	0/0:33,0:33:87.30:0,87,1451	0/0:40,0:38:99:0,99,1564	0/0:54,1:53:69.61:0,70,1132	0/1:17,12:27:28.95:117,0,29	0/0:41,0:42:90.23:0,90,1493	0/0:38,0:38:92.73:0,93,1547	0/1:21,10:16:69.30:270,0,69	0/0:10,4:13:5.94:0,6,41	1/1:36,3:28:3:44,3,0	0/0:17,0:16:30.75:0,31,491	0/0:8,0:8:15.04:0,15,238	0/0:69,1:67:48.48:0,48,1314	0/0:34,0:33:75.52:0,76,1294	0/1:24,8:27:99:215,0,317	0/1:17,7:21:86:86,0,96	1/1:1,2:3:6.02:74,6,0
chr10	100845943	.	G	GAC	270.16	PASS	AB=0.894;AC=8;AF=0.143;AN=56;BaseQRankSum=7.634;DP=905;FS=2.817;HRun=0;HaplotypeScore=190.9394;InbreedingCoeff=0.3123;MQ=51.64;MQ0=21;MQRankSum=-6.624;QD=1.75;ReadPosRankSum=2.323;VQSLOD=2.8067;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:42:50.91:0,51,672	0/0:17,0:16:24.01:0,24,304	0/0:19,0:3:5.33:0,5,23	0/0:41,0:10:10.03:0,10,110	0/0:27,0:27:72.15:0,72,932	0/0:23,0:23:66.19:0,66,845	0/0:42,0:41:96.76:0,97,1246	0/0:45,0:30:31.38:0,31,294	0/0:36,0:36:96.29:0,96,1244	0/0:35,0:35:90.19:0,90,1154	0/0:28,0:28:75.20:0,75,950	0/0:48,0:47:60.19:0,60,790	0/0:30,0:30:81.25:0,81,1057	0/0:41,0:39:93.25:0,93,1201	0/0:53,0:51:84.69:0,85,1100	0/1:18,7:24:2.63:53,0,3	0/0:40,0:40:99:0,108,1352	0/0:39,0:39:80.35:0,80,1131	0/1:30,0:17:79.61:80,0,107	0/0:16,1:16:5.68:0,6,50	1/1:42,2:35:0.88:2,1,0	0/0:21,0:20:39.97:0,40,488	0/0:10,0:10:21.06:0,21,264	0/0:61,0:61:74.74:0,75,1196	0/0:33,0:32:78.21:0,78,1003	0/1:30,1:27:99:132,0,251	0/1:15,4:17:12.14:64,0,12	1/1:5,0:4:5.85:62,6,0
chr10	100845953	.	CACAA	C	3541.29	PASS	AB=0.677;AC=12;AF=0.214;AN=56;BaseQRankSum=9.165;DP=912;FS=4.136;HRun=0;HaplotypeScore=194.2262;InbreedingCoeff=0.6051;MQ=51.92;MQ0=17;MQRankSum=-12.573;QD=16.70;ReadPosRankSum=-0.470;VQSLOD=2.8057;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:42:73.53:0,74,1753	0/0:16,0:15:31.13:0,31,719	0/0:25,0:4:4.94:0,5,62	0/0:42,0:10:19.64:0,20,309	0/0:25,0:25:63.21:0,63,1633	0/0:25,0:25:72.19:0,72,1709	0/0:43,0:42:99:0,110,2839	0/1:6,39:32:18.75:1160,0,19	0/0:39,0:39:99:0,114,2724	0/0:40,0:39:99:0,111,2900	0/0:27,0:27:78.25:0,78,1917	0/0:49,0:48:75.21:0,75,1768	0/0:31,0:31:90.29:0,90,2325	0/0:37,0:35:99:0,102,2508	0/0:54,0:52:99:0,102,2426	1/1:10,13:22:13.58:270,14,0	0/0:39,0:39:99:0,108,2526	0/0:39,0:39:83.70:0,84,2666	1/1:10,14:15:30.56:685,31,0	1/1:6,12:17:11.82:205,12,0	0/1:31,12:33:0.09:0,0,0	0/0:21,0:21:52.87:0,53,1092	0/0:12,0:12:30.57:0,31,746	0/0:60,0:60:99:0,122,2815	0/0:32,0:31:87.95:0,88,2014	0/1:16,16:30:39.25:837,0,39	0/1:13,8:19:12.79:221,0,13	1/1:3,3:5:9.03:163,9,0
chr10	100845957	.	A	AGAC	548.60	PASS	AB=0.981;AC=11;AF=0.196;AN=56;BaseQRankSum=9.390;DP=916;FS=5.671;HRun=0;HaplotypeScore=199.6722;InbreedingCoeff=0.3540;MQ=51.78;MQ0=15;MQRankSum=-10.782;QD=2.55;ReadPosRankSum=-1.288;VQSLOD=2.2182;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:44:80.07:0,80,1361	0/0:14,0:13:30.57:0,31,537	0/0:26,0:4:5.79:0,6,79	0/0:44,0:10:20.48:0,20,261	0/0:22,0:22:63.22:0,63,1150	0/0:23,0:23:69.19:0,69,1206	0/0:42,0:41:99:0,115,2041	0/1:44,0:33:54.56:173,0,55	0/0:41,0:41:99:0,120,2015	0/0:39,0:38:99:0,114,2065	0/0:26,0:26:78.22:0,78,1365	0/0:49,0:48:81.21:0,81,1340	0/0:29,0:29:87.30:0,87,1618	0/0:38,0:36:99:0,99,1774	0/0:53,0:51:99:0,106,1748	1/1:19,7:25:5.25:66,5,0	0/0:40,0:40:99:0,114,1944	0/0:41,0:41:99:0,117,2021	0/1:27,0:16:42.49:45,0,42	1/1:19,1:19:0.07:52,0,0	0/1:40,0:31:0.68:1,0,1	0/0:22,0:22:52.79:0,53,823	0/0:14,0:14:33.57:0,34,577	0/0:60,0:60:99:0,121,2044	0/0:31,0:30:78.83:0,79,1358	0/1:33,0:30:71.03:201,0,71	0/1:17,2:18:21.63:82,0,22	1/1:6,0:5:7.70:69,8,0
chr10	100846036	.	G	GACAC	7159.01	PASS	AB=0.675;AC=15;AF=0.268;AN=56;BaseQRankSum=10.726;DP=1050;FS=38.313;HRun=0;HaplotypeScore=217.4348;InbreedingCoeff=0.9197;MQ=54.26;MQ0=22;MQRankSum=-6.752;QD=22.80;ReadPosRankSum=-1.185;VQSLOD=2.7795;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:99:0,110,1795	0/0:17,0:17:48.16:0,48,842	0/0:62,0:27:41.47:0,41,589	0/0:61,0:20:17.27:0,17,379	0/0:28,0:28:69.22:0,69,1189	0/0:15,0:15:42.09:0,42,667	0/0:38,0:38:93.32:0,93,1628	1/1:37,4:28:32.09:500,32,0	0/0:32,0:32:81.08:0,81,1364	0/0:43,0:41:99:0,108,1750	0/0:19,0:19:45.13:0,45,740	0/0:30,0:30:63.17:0,63,1044	0/0:36,0:36:96.31:0,96,1622	0/0:36,0:36:90.27:0,90,1532	0/0:36,0:36:90.19:0,90,1448	0/1:14,12:26:7.69:661,0,8	0/0:53,0:54:99:0,147,2352	0/0:40,0:40:99:0,111,1853	1/1:15,6:11:21.04:445,21,0	1/1:10,24:33:38.92:841,39,0	1/1:24,63:100:80.92:1785,81,0	0/0:27,0:26:65.88:0,66,1073	0/0:29,0:28:57.14:0,57,856	0/0:63,0:63:99:0,134,2334	0/0:26,0:26:66.20:0,66,1090	1/1:10,35:46:30.90:1504,31,0	1/1:3,24:28:33.11:808,33,0	1/1:0,10:11:24.08:615,24,0
chr10	100846175	.	GAC	G	810.17	PASS	AB=0.935;AC=5;AF=0.089;AN=56;BaseQRankSum=2.806;DP=862;FS=1.367;HRun=0;HaplotypeScore=159.4266;InbreedingCoeff=0.6702;MQ=50.69;MQ0=26;MQRankSum=2.157;QD=9.00;ReadPosRankSum=1.208;VQSLOD=3.2724;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:81.26:0,81,1320	1/1:12,5:13:9.07:190,9,0	0/0:33,0:7:0.90:0,1,181	0/0:44,1:14:22.91:0,23,277	0/0:29,0:28:70.47:0,70,1013	0/0:13,0:13:36.06:0,36,532	0/0:31,1:30:28.34:0,28,984	0/0:58,0:36:67.60:0,68,580	0/0:32,0:32:81.26:0,81,1282	0/0:46,1:46:91.25:0,91,2000	0/0:19,0:19:51.17:0,51,835	0/0:28,0:28:57.04:0,57,858	0/0:25,0:25:57.19:0,57,943	0/0:36,0:34:73.12:0,73,1078	1/1:30,14:42:59.62:714,60,0	0/1:27,2:28:29.16:29,0,244	0/0:24,1:25:60.62:0,61,943	0/0:21,0:22:44.65:0,45,843	0/0:25,0:18:42.62:0,43,476	0/0:15,0:14:18.92:0,19,172	0/0:69,4:66:59.67:0,60,537	0/0:26,0:26:20.59:0,21,279	0/0:20,0:19:30.08:0,30,467	0/0:36,0:37:29.04:0,29,404	0/0:26,0:25:67.77:0,68,1067	0/0:34,0:30:52.20:0,52,688	0/0:20,1:20:29.91:0,30,366	0/0:7,0:7:17.67:0,18,153
chr10	100846189	.	GAC	G	2216.49	PASS	AB=0.964;AC=15;AF=0.268;AN=56;BaseQRankSum=4.332;DP=803;FS=15.553;HRun=0;HaplotypeScore=148.2747;InbreedingCoeff=0.6531;MQ=48.64;MQ0=28;MQRankSum=-5.847;QD=7.97;ReadPosRankSum=0.608;VQSLOD=2.5693;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:72.24:0,72,1154	0/0:13,0:9:6.55:0,7,41	0/0:21,1:4:5.97:0,6,58	0/0:32,1:12:12.44:0,12,104	0/0:27,0:26:28.11:0,28,926	0/0:13,0:13:32.69:0,33,491	0/0:35,0:33:54.14:0,54,815	1/1:58,0:33:67.95:686,68,0	0/0:34,0:34:64.52:0,65,1004	0/0:55,0:53:99:0,137,1963	0/0:23,0:23:47.86:0,48,657	0/0:22,0:22:18.47:0,18,588	0/0:28,0:28:66.12:0,66,960	0/0:33,0:33:25:0,25,877	0/0:39,0:36:29.10:0,29,135	1/1:26,0:25:39.30:314,39,0	0/0:26,1:26:54.18:0,54,865	0/0:19,0:19:30.87:0,31,647	0/1:22,2:15:28.21:162,0,28	1/1:12,0:11:6.19:135,6,0	1/1:61,2:56:40.77:426,41,0	0/0:20,0:20:11.72:0,12,163	0/0:16,0:15:24.07:0,24,365	0/1:34,0:34:54.10:54,0,205	0/0:28,0:27:63.03:0,63,928	0/1:31,1:28:86.30:367,0,86	1/1:21,1:20:11.62:173,12,0	1/1:7,0:7:11.86:86,12,0
chr10	100846203	.	G	GACACAC	1586.42	PASS	AB=0.856;AC=13;AF=0.241;AN=54;BaseQRankSum=3.070;DP=696;FS=0.583;HRun=0;HaplotypeScore=184.5230;InbreedingCoeff=0.6539;MQ=47.90;MQ0=20;MQRankSum=0.951;QD=9.17;ReadPosRankSum=0.160;VQSLOD=2.5849;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:38.53:792,39,0	1/1:12,0:8:5.73:90,6,0	./.	0/0:21,0:8:0.40:0,0,1	0/0:28,0:27:48.19:0,48,896	0/0:15,0:15:36.02:0,36,576	0/0:31,0:30:54.11:0,54,919	0/0:50,0:29:16.83:0,17,294	0/0:29,0:29:60.58:0,61,1121	0/0:57,0:55:91.42:0,91,1950	0/0:19,0:19:34.67:0,35,644	1/1:17,0:17:24.43:466,24,0	0/0:28,0:28:54.11:0,54,965	0/0:31,0:31:47.90:0,48,897	1/1:38,0:35:14.02:192,14,0	0/1:23,0:23:6.72:7,0,196	0/0:29,0:28:45.85:0,46,945	0/0:18,0:18:35.82:0,36,656	0/0:18,0:11:18.83:0,19,203	0/0:10,0:8:3.65:0,4,66	0/0:52,0:46:16.58:0,17,190	0/1:4,13:17:0:0,0,0	1/1:11,0:10:9.02:189,9,0	0/0:12,16:28:2.29:0,2,6	0/0:32,0:31:63.86:0,64,1151	0/1:27,0:25:12.20:12,0,453	0/0:17,0:16:8.76:0,9,259	0/0:5,0:5:12.04:0,12,149
chr10	100846870	.	GA	G	1920.08	PASS	AB=0.864;AC=11;AF=0.196;AN=56;BaseQRankSum=10.579;DP=525;FS=0.425;HRun=10;HaplotypeScore=56.1911;InbreedingCoeff=0.8485;MQ=75.14;MQ0=0;MQRankSum=-1.096;QD=16.00;ReadPosRankSum=0.775;VQSLOD=3.8553;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:59.98:521,60,0	0/0:7,0:7:12.03:0,12,133	0/1:16,3:18:27.09:27,0,248	0/0:8,0:8:9.40:0,9,80	0/0:23,0:23:54.13:0,54,587	0/0:33,0:33:93.24:0,93,1018	0/0:10,0:10:24.06:0,24,266	0/0:43,0:43:99:0,117,1254	0/0:10,0:10:30.07:0,30,324	0/0:29,0:29:78.21:0,78,857	0/0:15,0:16:15.91:0,16,386	1/1:1,12:13:32.99:287,33,0	0/0:23,1:24:37.11:0,37,638	0/0:9,0:9:24.06:0,24,265	0/0:13,0:13:33.09:0,33,365	0/0:17,0:17:48.13:0,48,531	0/0:31,1:32:67.18:0,67,960	0/0:11,1:13:12.88:0,13,353	0/0:24,0:24:51.14:0,51,564	0/0:20,0:20:49.38:0,49,534	0/0:14,0:14:42.07:0,42,444	1/1:2,21:23:59.99:521,60,0	1/1:3,19:22:17.82:384,18,0	1/1:1,16:17:14.81:358,15,0	0/0:14,1:15:19.06:0,19,439	0/0:29,0:29:87.24:0,87,962	0/0:12,0:12:33.06:0,33,346	0/0:4,0:4:12.03:0,12,133
chr10	100847777	.	A	AACAGCG	4262.36	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-5.597;DP=576;FS=7.596;HRun=0;HaplotypeScore=117.5506;InbreedingCoeff=0.9895;MQ=74.82;MQ0=0;MQRankSum=-10.499;QD=42.20;ReadPosRankSum=0.672;VQSLOD=4.5175;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,18:32:42.14:1399,42,0	0/0:8,0:8:24.08:0,24,500	0/0:25,0:24:36.11:0,36,661	0/0:18,0:17:27.09:0,27,497	0/0:26,0:26:69.23:0,69,1370	0/0:15,0:15:39.12:0,39,793	0/0:16,0:16:39.13:0,39,836	0/0:31,0:31:49.39:0,49,985	0/0:19,0:19:48.16:0,48,1028	0/0:13,0:13:27.08:0,27,539	0/0:17,0:17:48.15:0,48,980	1/1:5,13:20:39.13:1299,39,0	0/0:31,0:31:87.23:0,87,1780	0/0:19,0:19:45.12:0,45,835	0/0:20,0:20:48.15:0,48,954	0/0:19,0:19:45.15:0,45,922	0/0:26,0:26:63.19:0,63,1297	0/0:18,0:18:51.18:0,51,1090	0/0:16,0:16:30.07:0,30,599	0/0:29,0:29:69.20:0,69,1361	0/0:23,0:23:48.16:0,48,1000	1/1:4,8:16:15.05:489,15,0	1/1:8,7:16:18.06:585,18,0	1/1:3,10:17:15.05:491,15,0	0/0:18,0:18:39.13:0,39,788	0/0:20,0:20:54.17:0,54,1097	0/0:27,0:27:69.19:0,69,1421	0/0:21,0:21:60.17:0,60,1169
chr10	100848068	.	GCACA	G	913.37	PASS	AB=0.877;AC=10;AF=0.200;AN=50;BaseQRankSum=4.037;DP=405;FS=11.726;HRun=0;HaplotypeScore=80.0549;InbreedingCoeff=0.3861;MQ=64.33;MQ0=5;MQRankSum=-0.929;QD=9.82;ReadPosRankSum=0.101;VQSLOD=1.7458;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:3,0:6:2.71:0,3,54	./.	./.	0/0:19,0:23:29.82:0,30,532	0/1:13,1:14:22.95:23,0,467	0/0:6,0:7:5.75:0,6,83	0/0:16,0:16:3.01:0,3,37	0/0:8,0:10:8.74:0,9,106	0/0:12,0:12:12.02:0,12,163	0/0:14,0:14:24.08:0,24,513	1/1:3,5:8:18.06:282,18,0	0/0:7,0:10:15.05:0,15,318	0/1:9,0:9:16.43:16,0,223	0/0:9,0:16:9.01:0,9,127	0/0:12,0:13:20.66:0,21,386	0/0:25,0:25:41.13:0,41,756	0/0:14,0:18:32.58:0,33,590	0/0:9,0:9:14.82:0,15,141	0/1:21,1:22:17.23:17,0,488	0/0:11,0:11:12.04:0,12,261	1/1:3,10:14:21.54:311,22,0	0/1:8,8:17:17.95:247,0,18	1/1:3,4:8:12.03:169,12,0	0/0:17,0:17:36.09:0,36,690	0/0:17,0:19:38.81:0,39,659	0/0:18,0:20:25.85:0,26,578	0/0:17,0:20:38.60:0,39,666
chr10	100848240	.	T	TG	8149.24	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.412;DP=569;FS=2.358;HRun=0;HaplotypeScore=72.3127;InbreedingCoeff=0.9986;MQ=88.07;MQ0=0;MQRankSum=-3.622;QD=43.12;ReadPosRankSum=-0.936;VQSLOD=5.0440;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.17:0,51,710	0/0:12,0:12:36.12:0,36,503	0/0:25,0:25:75.09:0,75,985	0/0:16,0:16:42.09:0,42,530	0/0:25,0:25:72.23:0,72,989	0/0:27,0:27:81.26:0,81,1117	0/0:9,0:9:24.08:0,24,335	1/1:1,26:27:75.22:1108,75,0	0/0:12,0:12:36.11:0,36,488	0/0:35,0:35:99:0,105,1437	0/0:24,0:24:69.21:0,69,932	0/0:13,0:13:39.13:0,39,543	0/0:18,0:18:48.16:0,48,671	0/0:8,0:8:24.07:0,24,318	0/0:24,0:24:69.22:0,69,949	1/1:0,15:15:42.14:656,42,0	0/0:22,0:22:60.15:0,60,801	0/0:17,0:17:51.15:0,51,695	1/1:0,21:21:63.18:923,63,0	1/1:0,28:28:81.27:1267,81,0	1/1:1,23:24:69.23:1079,69,0	0/0:18,0:18:54.18:0,54,755	0/0:24,0:24:69.21:0,69,921	0/0:14,0:14:42.11:0,42,565	0/0:18,0:18:54.17:0,54,740	1/1:1,32:33:96.31:1476,96,0	1/1:3,30:33:87.21:1315,87,0	1/1:0,8:8:21.07:327,21,0
chr10	100849644	.	CTG	C	91.66	PASS	AB=0.893;AC=8;AF=0.143;AN=56;BaseQRankSum=1.640;DP=565;FS=5.089;HRun=0;HaplotypeScore=113.3370;InbreedingCoeff=-0.0478;MQ=60.91;MQ0=7;MQRankSum=1.238;QD=0.71;ReadPosRankSum=-0.598;VQSLOD=1.9868;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:2.84:0,3,14	0/0:1,0:6:9:0,9,78	1/1:24,1:13:3.01:35,3,0	0/0:42,0:24:18.01:0,18,279	0/0:18,1:19:0.69:0,1,407	0/0:30,1:31:25.58:0,26,797	0/1:14,3:17:30.18:30,0,424	0/0:32,0:31:17:0,17,153	0/1:14,2:16:24.14:24,0,538	0/1:18,2:20:27.20:27,0,474	0/1:23,2:26:47.53:48,0,605	0/0:14,0:14:4.21:0,4,23	0/1:13,1:14:10.55:11,0,300	0/0:12,0:12:27.09:0,27,420	0/0:8,0:26:14.96:0,15,122	0/0:12,0:12:11.99:0,12,120	0/0:29,1:30:22.51:0,23,738	0/0:24,0:24:45.09:0,45,650	0/0:16,0:15:14.98:0,15,124	0/0:12,0:12:11.98:0,12,100	0/0:19,0:19:8.55:0,9,72	0/0:7,0:19:3:0,3,26	0/0:13,0:12:6.48:0,6,70	0/0:24,0:24:3.42:0,3,25	0/1:9,2:11:45.19:45,0,256	0/0:22,0:22:32.40:0,32,270	0/0:18,0:18:23.86:0,24,201	0/0:12,0:12:20.96:0,21,172
chr10	100849645	.	T	TGTGTGG	6632.55	PASS	AB=0.938;AC=24;AF=0.429;AN=56;BaseQRankSum=1.423;DP=585;FS=9.364;HRun=0;HaplotypeScore=154.0117;InbreedingCoeff=0.5366;MQ=59.56;MQ0=7;MQRankSum=-7.637;QD=22.48;ReadPosRankSum=-1.116;VQSLOD=3.7156;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:30:9.91:10,0,117	1/1:6,0:6:9.03:251,9,0	0/0:25,0:12:26.92:0,27,273	0/0:44,0:25:50.27:0,50,729	0/0:19,0:19:51.05:0,51,775	0/0:31,0:31:81.62:0,82,1397	0/0:17,0:17:41.71:0,42,759	1/1:34,0:33:86.86:1234,87,0	0/0:16,0:16:48.14:0,48,972	0/0:19,0:19:57.13:0,57,902	0/0:26,0:26:74.73:0,75,1240	0/1:14,0:14:13.47:13,0,50	0/0:14,0:14:36.07:0,36,605	0/0:12,0:12:36.07:0,36,694	0/1:27,0:27:47.18:365,0,47	0/1:6,8:15:51.55:239,0,52	0/0:31,0:31:50.44:0,50,1244	0/0:24,0:24:57.04:0,57,1034	1/1:3,14:16:48.01:803,48,0	1/1:6,10:17:38.78:659,39,0	1/1:18,2:20:14.61:220,15,0	0/1:19,0:19:35.90:111,0,36	0/1:13,0:12:30.95:45,0,31	1/1:24,0:24:3.81:33,4,0	0/0:12,0:12:33.07:0,33,572	1/1:6,17:25:62.13:1220,62,0	1/1:5,14:19:27.01:882,27,0	1/1:3,9:14:21.07:550,21,0
chr10	100849647	.	T	TGTGG	4398.13	PASS	AB=0.951;AC=20;AF=0.357;AN=56;BaseQRankSum=5.232;DP=586;FS=7.605;HRun=0;HaplotypeScore=144.2197;InbreedingCoeff=0.3896;MQ=58.38;MQ0=8;MQRankSum=-7.385;QD=16.72;ReadPosRankSum=0.362;VQSLOD=4.2797;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:21.15:0,21,152	1/1:7,0:7:9.03:172,9,0	0/0:27,0:12:29.92:0,30,284	0/0:45,0:25:59.26:0,59,808	0/0:17,0:17:51.05:0,51,676	0/0:32,0:32:80.99:0,81,1200	0/0:16,0:16:38.96:0,39,652	1/1:33,0:32:68.37:784,68,0	0/0:17,0:17:48.12:0,48,800	0/0:20,0:20:57.12:0,57,790	0/0:25,0:25:71.99:0,72,1049	0/1:14,0:14:8.91:9,0,54	0/0:13,0:13:36.07:0,36,524	0/0:13,0:13:36.07:0,36,584	0/1:27,0:27:69.74:240,0,70	0/1:15,0:15:72.12:127,0,72	0/0:31,0:31:32.72:0,33,1057	0/0:24,0:24:37.43:0,37,853	1/1:16,1:16:45:574,45,0	0/1:17,0:17:15.30:348,0,15	0/1:7,12:20:10.81:142,0,11	0/1:20,0:20:55.56:56,0,58	0/1:14,0:13:21.49:21,0,54	0/1:24,0:24:13.58:14,0,14	0/0:12,0:12:33.07:0,33,485	1/1:22,3:25:59.49:904,59,0	1/1:16,1:17:26.85:543,27,0	1/1:10,2:13:21.07:466,21,0
chr10	100852594	.	GGTCCTTGGCTTTAAGACCCCCAACATTTCTCCCAA	G	16537.66	PASS	AB=0.614;AC=17;AF=0.315;AN=54;BaseQRankSum=13.711;DP=691;FS=2.562;HRun=0;HaplotypeScore=569.4958;InbreedingCoeff=0.8855;MQ=83.34;MQ0=0;MQRankSum=-11.192;QD=76.56;ReadPosRankSum=4.138;VQSLOD=1.0594;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.25:0,84,11067	1/1:2,8:10:15.05:1367,15,0	0/0:23,0:23:66.20:0,66,3670	0/0:25,0:25:72.25:0,72,4165	0/0:39,0:39:99:0,114,14547	0/0:34,0:33:96.33:0,96,13438	0/0:24,0:24:69.24:0,69,7859	1/1:19,0:19:6:54,6,0	0/0:23,0:23:69.24:0,69,9349	0/0:39,0:39:99:0,114,14707	0/0:19,0:19:57.20:0,57,6618	0/0:25,0:25:75.26:0,75,9599	0/0:28,0:28:84.27:0,84,9138	0/0:27,0:27:81.28:0,81,11558	1/1:9,23:32:39.61:3555,40,0	1/1:7,24:31:39.13:3395,39,0	0/0:22,0:22:63.20:0,63,8250	0/0:11,0:11:33.09:0,33,4397	1/1:5,15:20:44.58:870,45,0	1/1:11,23:34:26.98:1951,27,0	./.	0/0:23,0:23:69.24:0,69,8008	0/0:21,0:21:63.21:0,63,8253	0/0:33,0:33:99:0,99,12651	0/0:18,0:18:54.19:0,54,5525	0/1:13,22:35:99:2884,0,424	1/1:13,17:30:15.52:1368,16,0	1/1:1,4:5:12.04:1094,12,0
chr10	100854134	.	T	TG	432.78	PASS	AB=0.809;AC=7;AF=0.125;AN=56;BaseQRankSum=10.638;DP=631;FS=6.361;HRun=0;HaplotypeScore=124.3820;InbreedingCoeff=-0.1160;MQ=62.30;MQ0=1;MQRankSum=-4.427;QD=2.87;ReadPosRankSum=1.515;VQSLOD=2.8604;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:14.02:0,14,401	0/1:7,4:11:8.56:85,0,9	0/0:24,0:20:59.77:0,60,757	0/0:25,0:19:41.10:0,41,521	0/0:26,0:26:72.23:0,72,982	0/0:30,0:29:75.25:0,75,1036	0/0:30,0:30:84.21:0,84,1116	0/0:25,0:25:3.36:0,3,196	0/0:25,0:25:72.22:0,72,968	0/0:40,0:40:99:0,111,1518	0/0:24,0:24:72.24:0,72,1006	0/0:15,0:15:35.48:0,35,321	0/0:25,0:25:64.10:0,64,881	0/0:22,0:22:60.19:0,60,821	0/1:26,13:39:99:196,0,173	0/1:20,10:30:38.94:173,0,39	0/0:20,0:20:51.13:0,51,690	0/0:11,0:11:33.11:0,33,461	0/1:17,0:17:14.34:14,0,121	0/1:25,2:27:6.64:7,0,77	0/0:25,1:26:42.52:0,43,235	0/0:21,0:20:37.91:0,38,362	0/0:19,0:19:31.76:0,32,303	0/0:14,0:14:20.10:0,20,285	0/0:21,0:20:60.17:0,60,813	0/0:14,2:16:5.98:0,6,199	0/1:15,5:20:41.55:42,0,63	0/1:4,3:7:31.70:44,0,32
chr10	100854135	.	T	TTGTGTG	6444.92	PASS	AB=0.921;AC=29;AF=0.537;AN=54;BaseQRankSum=6.073;DP=687;FS=5.793;HRun=0;HaplotypeScore=193.6885;InbreedingCoeff=0.7223;MQ=60.18;MQ0=2;MQRankSum=-6.492;QD=16.70;ReadPosRankSum=-1.512;VQSLOD=3.6895;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,1:25:8.22:425,8,0	1/1:8,0:12:8.99:143,9,0	0/0:23,0:19:11.29:0,11,108	0/0:26,0:20:8.83:0,9,82	0/0:25,0:26:48.16:0,48,955	0/0:24,0:29:48.12:0,48,763	0/1:29,0:29:11.15:11,0,988	1/1:26,0:26:9.02:148,9,0	0/0:25,0:26:45.14:0,45,858	0/0:39,0:40:51.16:0,51,969	0/0:24,0:24:42.11:0,42,788	1/1:6,9:19:24.08:706,24,0	0/0:26,0:26:39.44:0,39,704	0/0:23,0:23:13:0,13,701	0/1:29,0:42:45.03:614,0,45	1/1:21,0:31:60.19:1530,60,0	0/0:21,0:21:17.53:0,18,740	0/1:11,0:11:6.95:7,0,173	1/1:22,0:22:14.07:246,14,0	1/1:29,0:31:21.02:421,21,0	1/1:27,0:28:8.20:123,8,0	1/1:15,7:26:11.78:335,12,0	1/1:10,12:24:11.82:372,12,0	./.	0/0:20,0:20:51.10:0,51,849	1/1:20,0:22:21.06:450,21,0	1/1:24,0:29:24.97:618,25,0	1/1:5,0:7:12.04:296,12,0
chr10	100854167	.	G	GTGTG	5669.37	PASS	AB=1.000;AC=28;AF=0.519;AN=54;BaseQRankSum=9.872;DP=657;FS=7.346;HRun=0;HaplotypeScore=151.3871;InbreedingCoeff=0.8032;MQ=67.29;MQ0=2;MQRankSum=-8.370;QD=18.47;ReadPosRankSum=-3.004;VQSLOD=3.4835;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:26.54:368,27,0	1/1:9,0:9:13.02:258,13,0	0/0:34,0:26:10.57:0,11,83	0/0:32,0:24:1.93:0,2,30	0/0:25,0:24:48.15:0,48,740	0/0:37,0:36:48.09:0,48,597	0/0:39,0:39:11.79:0,12,784	1/1:23,0:23:21.06:346,21,0	0/0:23,0:23:45.14:0,45,672	0/0:38,0:38:51.15:0,51,750	0/0:26,0:26:42.11:0,42,621	1/1:18,0:19:27.09:439,27,0	0/0:18,0:18:39.57:0,40,568	0/0:19,0:19:36.12:0,36,566	0/1:30,0:30:19.69:916,0,20	1/1:27,0:28:63.20:1075,63,0	0/0:23,0:23:39.10:0,39,572	0/1:9,0:9:6.95:7,0,131	1/1:17,0:16:16.15:219,16,0	1/1:29,0:29:33.06:488,33,0	1/1:20,0:20:8.50:105,9,0	1/1:22,0:21:17.84:304,18,0	1/1:18,0:18:18.32:240,18,0	./.	0/0:20,0:20:51.09:0,51,681	1/1:18,0:18:15.04:230,15,0	1/1:24,4:31:18.53:367,19,0	1/1:8,0:7:18.06:305,18,0
chr10	100854348	.	TCTTGTGTTATATGGACAAAAAGC	T	5061.52	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.616;DP=554;FS=0.727;HRun=0;HaplotypeScore=316.8202;InbreedingCoeff=0.9388;MQ=85.27;MQ0=0;MQRankSum=-8.355;QD=107.69;ReadPosRankSum=3.337;VQSLOD=4.0900;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,3:9:8.42:577,8,0	0/0:14,0:14:42.14:0,42,4363	0/0:18,0:18:47.86:0,48,2967	0/0:20,0:20:54.17:0,54,2811	0/0:24,0:24:72.25:0,72,7078	0/0:37,0:37:99:0,105,10093	0/0:17,0:17:51.16:0,51,4844	0/0:31,0:31:93.31:0,93,7487	0/0:19,0:19:57.20:0,57,5609	0/0:30,0:30:87.30:0,87,8843	0/0:27,0:27:81.28:0,81,7660	1/1:0,5:5:12.04:770,12,0	0/0:27,0:27:81.28:0,81,7964	0/0:20,0:20:57.20:0,57,5653	0/0:27,0:27:81.28:0,81,7978	0/0:20,0:20:60.21:0,60,5716	0/0:19,0:19:57.15:0,57,5529	0/0:4,0:4:12.04:0,12,1305	0/0:13,0:13:36.12:0,36,3329	0/0:30,0:30:87.26:0,87,7403	0/0:30,0:30:90.31:0,90,8177	1/1:3,7:10:15.05:963,15,0	1/1:2,15:17:39.13:2504,39,0	1/1:2,4:6:6.02:247,6,0	0/0:25,0:25:75.24:0,75,6433	0/0:22,0:22:66.23:0,66,6958	0/0:27,0:27:78.23:0,78,7521	0/0:6,0:6:18.06:0,18,1695
chr10	100854505	.	TTGTGTGTG	T	3629.02	PASS	AB=1.000;AC=23;AF=0.442;AN=52;BaseQRankSum=5.168;DP=504;FS=0.000;HRun=0;HaplotypeScore=150.3693;InbreedingCoeff=0.7793;MQ=65.16;MQ0=6;MQRankSum=-6.023;QD=19.30;ReadPosRankSum=1.079;VQSLOD=3.0926;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,7:26:4.83:0,5,51	./.	0/0:24,0:22:6.01:0,6,72	0/0:20,0:13:3.01:0,3,46	0/0:29,0:32:60.19:0,60,2200	0/0:18,0:20:30.10:0,30,1092	0/0:23,0:26:33.11:0,33,944	1/1:17,5:22:15.01:305,15,0	0/0:16,0:17:39.12:0,39,1393	0/0:18,0:20:45.15:0,45,1522	0/0:20,0:21:45.15:0,45,1700	1/1:3,6:10:6.02:151,6,0	0/0:12,0:14:18.06:0,18,601	0/0:18,0:18:27.09:0,27,953	1/1:9,0:13:5.80:31,6,0	1/1:14,4:18:18.06:453,18,0	0/0:21,0:21:30.10:0,30,1062	0/0:15,0:14:24.08:0,24,622	1/1:10,5:15:9.02:227,9,0	1/1:9,10:20:8.98:170,9,0	0/1:10,0:10:69.56:70,0,105	1/1:6,7:13:9.03:227,9,0	1/1:6,8:14:8.77:226,9,0	./.	0/0:17,0:21:27.08:0,27,961	1/1:14,12:26:35.78:731,36,0	1/1:10,12:22:33.11:831,33,0	1/1:2,2:5:9.03:207,9,0
chr10	100855510	.	GGA	G	1088.92	PASS	AB=0.861;AC=12;AF=0.214;AN=56;BaseQRankSum=12.643;DP=847;FS=11.169;HRun=0;HaplotypeScore=331.9606;InbreedingCoeff=-0.2917;MQ=58.29;MQ0=1;MQRankSum=-13.840;QD=2.57;ReadPosRankSum=0.438;VQSLOD=0.9635;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:85.09:0,85,1565	0/1:10,7:22:99:199,0,276	0/0:26,0:22:53.33:0,53,962	0/0:24,0:22:45.08:0,45,880	0/1:27,9:47:99:109,0,919	0/0:25,2:27:0.92:0,1,1072	0/0:36,1:37:59.99:0,60,1562	0/0:37,0:37:78.60:0,79,1517	0/1:26,2:28:12.31:12,0,1244	0/1:35,7:46:86.19:86,0,1423	0/1:28,5:38:99:115,0,826	0/0:27,1:28:17.89:0,18,1231	0/0:34,1:35:56.93:0,57,1669	0/0:27,0:27:62.17:0,62,1310	0/0:28,1:28:28.09:0,28,1192	0/1:18,2:20:8.78:9,0,900	0/0:27,1:27:47.17:0,47,1372	0/0:11,0:11:15.97:0,16,500	0/0:17,0:17:49.70:0,50,878	0/1:26,10:41:99:206,0,874	0/0:12,0:12:36.08:0,36,669	0/1:25,10:35:99:188,0,863	0/1:36,5:41:99:105,0,1105	0/0:34,3:37:56.42:0,56,1785	0/1:37,5:45:87.96:88,0,1225	0/1:27,5:32:30.71:31,0,1001	0/1:26,3:29:89.39:89,0,794	0/0:11,0:15:3.05:0,3,319
chr10	100858103	.	T	TAC	8429.49	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-14.779;DP=1077;FS=2.691;HRun=0;HaplotypeScore=133.4821;InbreedingCoeff=0.9999;MQ=60.70;MQ0=12;MQRankSum=6.472;QD=39.21;ReadPosRankSum=6.079;VQSLOD=6.5987;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,49:48:99:1833,102,0	0/0:17,0:17:48.15:0,48,667	0/0:50,0:28:61.04:0,61,811	0/0:49,0:30:50.57:0,51,655	0/0:29,0:29:86.07:0,86,1154	0/0:20,0:20:50.38:0,50,691	0/0:19,0:19:51.13:0,51,691	0/0:47,0:46:99:0,132,1816	0/0:53,0:53:99:0,147,2008	0/0:42,0:42:99:0,111,1544	0/0:27,0:27:72.14:0,72,968	1/1:1,43:44:99:1905,105,0	0/0:43,0:43:99:0,120,1698	0/0:46,0:46:99:0,126,1774	0/0:38,0:38:99:0,105,1491	0/0:30,0:30:78.23:0,78,1080	0/0:38,0:38:99:0,108,1464	0/0:29,1:30:32.40:0,32,1124	0/0:32,0:32:93.09:0,93,1283	0/0:25,0:25:60.20:0,60,859	0/0:111,3:114:99:0,280,3971	1/1:2,31:32:75.26:1374,75,0	1/1:4,26:30:63.10:1154,63,0	1/1:3,56:57:99:2163,120,0	0/0:33,0:33:74.07:0,74,989	0/0:43,0:43:99:0,120,1669	0/0:23,0:23:66.22:0,66,940	0/0:12,0:12:36.09:0,36,477
chr10	100858633	.	AT	A	2215.38	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=2.159;DP=538;FS=1.461;HRun=3;HaplotypeScore=94.6547;InbreedingCoeff=0.7814;MQ=70.40;MQ0=0;MQRankSum=-0.538;QD=18.01;ReadPosRankSum=-0.892;VQSLOD=3.0507;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:39.12:482,39,0	0/0:12,0:12:28.60:0,29,123	0/0:6,0:6:17.81:0,18,193	0/0:8,0:8:15.05:0,15,215	0/0:32,0:32:96.30:0,96,1342	0/0:32,0:32:87.28:0,87,1234	0/0:10,0:10:24.07:0,24,329	0/1:31,0:31:88.43:88,0,136	0/0:17,0:17:51.15:0,51,714	0/0:30,0:30:81.26:0,81,1136	0/0:18,0:18:51.15:0,51,701	1/1:1,11:12:30.09:372,30,0	0/0:21,0:21:63.20:0,63,888	0/0:16,0:16:48.15:0,48,660	0/1:20,0:20:1.05:1,0,129	0/0:11,0:11:28.04:0,28,110	0/0:20,0:20:54.16:0,54,736	0/0:22,0:22:63.21:0,63,905	0/0:19,0:19:3.67:0,4,107	0/0:39,0:39:19.46:0,19,286	0/0:7,0:7:18.02:0,18,71	1/1:2,12:14:36.11:446,36,0	1/1:2,17:19:48.15:594,48,0	1/1:0,13:13:33.10:409,33,0	0/0:33,0:33:99:0,99,1406	0/0:29,0:29:20.05:0,20,212	0/0:21,0:21:8.88:0,9,145	0/0:12,0:12:27.48:0,27,114
chr10	100860505	.	A	AAC	5753.67	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-9.596;DP=652;FS=4.816;HRun=0;HaplotypeScore=75.1833;InbreedingCoeff=0.9892;MQ=72.91;MQ0=0;MQRankSum=-2.431;QD=47.16;ReadPosRankSum=-0.103;VQSLOD=5.8851;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,39:42:99:2026,105,0	0/0:12,0:12:36.12:0,36,551	0/0:15,0:14:26.07:0,26,437	0/0:22,0:23:36.65:0,37,735	0/0:26,0:26:75.25:0,75,1147	0/0:27,0:27:81.23:0,81,1173	0/0:25,0:25:75.22:0,75,1104	0/0:35,0:35:96.31:0,96,1416	0/0:15,0:15:45.15:0,45,689	0/0:20,0:20:57.18:0,57,845	0/0:18,0:18:54.17:0,54,790	1/1:1,24:25:60.21:1158,60,0	0/0:15,0:15:45.14:0,45,669	0/0:28,0:28:84.29:0,84,1286	0/0:25,0:25:75.24:0,75,1127	0/0:27,0:27:78.26:0,78,1193	0/0:32,0:31:90.28:0,90,1353	0/0:23,0:23:66.19:0,66,985	0/0:14,0:14:42.14:0,42,625	0/0:27,0:27:78.26:0,78,1194	0/0:23,0:23:63.19:0,63,923	1/1:0,19:20:54.18:1018,54,0	1/1:0,15:15:29.96:556,30,0	1/1:1,18:20:11.29:997,11,0	0/0:28,0:28:78.73:0,79,1176	0/0:29,0:29:75.24:0,75,1128	0/0:37,0:37:99:0,111,1670	0/0:6,0:6:18.06:0,18,274
chr10	100860819	.	GAGAATGCACCCAATCT	G	9100.80	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.633;DP=561;FS=8.342;HRun=0;HaplotypeScore=243.8595;InbreedingCoeff=0.9880;MQ=72.81;MQ0=0;MQRankSum=-13.090;QD=92.87;ReadPosRankSum=1.820;VQSLOD=2.9734;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,29:35:66.23:2985,66,0	0/0:6,0:6:18.06:0,18,1325	0/0:23,0:23:60.20:0,60,3035	0/0:27,0:27:74.28:0,74,4550	0/0:27,0:27:75.24:0,75,4972	0/0:14,0:14:42.14:0,42,3239	0/0:33,0:33:99:0,99,6879	0/0:18,0:18:54.17:0,54,3334	0/0:10,0:10:30.10:0,30,2041	0/0:16,0:16:42.14:0,42,2890	0/0:19,0:19:57.20:0,57,4209	1/1:1,20:21:51.18:2413,51,0	0/0:23,0:23:69.22:0,69,4834	0/0:17,0:17:48.16:0,48,3787	0/0:16,0:16:45.15:0,45,3571	0/0:22,0:22:66.23:0,66,4839	0/0:24,0:24:69.18:0,69,4908	0/0:26,0:26:78.27:0,78,6050	0/0:19,0:19:54.19:0,54,3558	0/0:20,0:20:57.18:0,57,3903	0/0:40,0:39:99:0,117,8749	1/1:5,8:13:18.06:765,18,0	1/1:2,7:9:21.07:953,21,0	1/1:2,18:20:45.15:1984,45,0	0/0:20,0:20:57.20:0,57,4311	0/0:25,0:25:75.26:0,75,5796	0/0:14,0:14:42.13:0,42,2383	0/0:4,0:4:12.04:0,12,952
chr10	100862809	.	GA	G	1228.30	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.905;DP=652;FS=13.650;HRun=1;HaplotypeScore=92.6610;InbreedingCoeff=0.9922;MQ=77.71;MQ0=1;MQRankSum=-11.090;QD=14.12;ReadPosRankSum=0.030;VQSLOD=1.7868;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:29.68:232,30,0	0/0:5,0:5:15.05:0,15,240	0/0:32,0:28:75.25:0,75,1178	0/0:22,2:21:60.05:0,60,816	0/0:22,0:22:66.21:0,66,1028	0/0:26,0:26:75.25:0,75,1178	0/0:27,0:27:81.25:0,81,1247	0/0:49,0:49:99:0,147,2201	0/0:24,0:24:72.22:0,72,1105	0/0:24,0:24:72.25:0,72,1152	0/0:22,0:22:66.22:0,66,1048	1/1:0,17:17:50.76:392,51,0	0/0:31,0:31:93.32:0,93,1477	0/0:17,0:17:51.17:0,51,815	0/0:26,0:26:78.24:0,78,1199	0/0:23,0:23:69.24:0,69,1103	0/0:22,0:22:63.21:0,63,1006	0/0:14,0:14:42.10:0,42,642	0/0:12,0:12:36.11:0,36,553	0/0:33,0:33:99:0,99,1536	0/0:22,0:22:66.22:0,66,1044	1/1:0,22:22:50.73:392,51,0	1/1:0,17:17:38.59:282,39,0	1/1:0,12:12:14.88:104,15,0	0/0:38,0:38:99:0,114,1794	0/0:23,0:23:69.24:0,69,1102	0/0:37,0:37:99:0,111,1772	0/0:12,0:12:33.11:0,33,524
chr10	100862811	.	TTTGAAC	T	3518.95	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.782;DP=661;FS=13.614;HRun=0;HaplotypeScore=150.5552;InbreedingCoeff=0.9924;MQ=77.61;MQ0=1;MQRankSum=-11.522;QD=40.92;ReadPosRankSum=0.089;VQSLOD=3.0247;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,11:19:30.10:567,30,0	0/0:5,0:5:15.05:0,15,565	0/0:33,0:29:87.26:0,87,2947	0/0:28,0:25:69.21:0,69,2105	0/0:24,0:24:72.23:0,72,2325	0/0:27,0:27:81.28:0,81,2941	0/0:26,0:26:78.22:0,78,2832	0/0:48,0:48:99:0,144,4685	0/0:24,0:24:72.25:0,72,2571	0/0:24,0:24:72.25:0,72,2605	0/0:23,0:23:69.24:0,69,2313	1/1:1,16:17:51.17:972,51,0	0/0:31,0:31:93.32:0,93,3409	0/0:17,0:17:51.18:0,51,1920	0/0:25,0:25:75.25:0,75,2649	0/0:23,0:23:69.24:0,69,2503	0/0:22,0:22:63.22:0,63,2278	0/0:14,0:14:39.13:0,39,1345	0/0:13,0:13:39.09:0,39,1271	0/0:32,0:32:96.32:0,96,3360	0/0:22,0:22:66.23:0,66,2473	1/1:2,20:22:51.17:970,51,0	1/1:3,14:17:38.87:731,39,0	1/1:3,8:11:15.05:279,15,0	0/0:39,0:39:99:0,117,4335	0/0:24,0:24:72.25:0,72,2561	0/0:38,0:38:99:0,114,4212	0/0:12,0:12:33.11:0,33,1180
chr10	100864501	.	CT	C	1078.43	PASS	AB=0.857;AC=23;AF=0.411;AN=56;BaseQRankSum=-2.374;DP=539;FS=6.594;HRun=16;HaplotypeScore=86.9321;InbreedingCoeff=0.5322;MQ=72.19;MQ0=6;MQRankSum=3.146;QD=4.20;ReadPosRankSum=3.745;VQSLOD=1.3775;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,1:30:61.22:0,61,361	0/1:5,4:10:8.29:61,0,8	0/0:23,0:15:19.63:0,20,112	0/0:14,0:11:6.19:0,6,31	0/1:21,1:25:9.40:9,0,143	0/0:16,0:17:14.89:0,15,133	0/1:12,0:11:5.99:6,0,52	1/1:16,9:28:26.37:143,26,0	0/1:13,2:14:3.10:3,0,179	0/0:20,2:22:26.99:0,27,293	0/0:21,1:23:1.60:0,2,174	0/0:11,0:19:39.54:0,40,220	0/0:12,3:15:8.89:0,9,168	0/1:12,2:13:37.44:37,0,56	1/1:7,9:17:0.06:75,0,0	1/1:6,6:14:21.07:105,21,0	0/0:19,1:22:18.17:0,18,240	0/0:15,1:17:9.13:0,9,154	1/1:26,6:34:4.76:187,5,0	1/1:4,10:16:10.18:150,10,0	1/1:6,11:19:25.06:130,25,0	0/0:15,0:18:32.04:0,32,194	0/0:10,0:16:8.32:0,8,117	0/0:11,0:16:15.24:0,15,83	0/0:22,3:27:6.77:0,7,230	1/1:9,8:18:24.31:145,24,0	1/1:10,9:20:21.47:117,21,0	1/1:4,5:10:18.73:101,19,0
chr10	100867368	.	CCA	C	1700.62	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=6.621;DP=526;FS=2.567;HRun=0;HaplotypeScore=73.0606;InbreedingCoeff=0.7689;MQ=68.98;MQ0=2;MQRankSum=-1.478;QD=18.69;ReadPosRankSum=2.572;VQSLOD=3.8959;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,1:18:31.80:0,32,112	0/1:8,0:8:22.66:23,0,118	0/0:18,0:11:32.93:0,33,370	0/0:20,0:19:30:0,30,379	0/0:21,0:21:62.33:0,62,916	0/0:22,0:22:66.16:0,66,1087	0/0:21,0:21:60.10:0,60,882	0/0:29,0:29:87:0,87,1287	0/0:11,0:11:33.07:0,33,530	0/0:25,0:25:75.17:0,75,1102	0/0:14,0:14:19.17:0,19,465	1/1:0,17:17:32.99:478,33,0	0/0:20,0:20:57.13:0,57,900	0/0:22,0:22:66.20:0,66,1179	0/1:20,0:20:7.96:8,0,314	0/0:21,0:21:63.19:0,63,1106	0/0:26,0:26:75.18:0,75,1254	0/0:11,0:11:33.09:0,33,571	0/0:16,0:16:47.27:0,47,622	0/0:12,0:12:36.08:0,36,555	0/0:28,0:28:74.58:0,75,1338	1/1:0,8:8:23.97:320,24,0	1/1:1,20:20:42.14:605,42,0	1/1:0,17:17:30.10:435,30,0	0/0:11,0:11:33.06:0,33,585	0/0:23,0:23:66.79:0,67,1057	0/0:28,0:28:84.23:0,84,1436	0/0:18,0:18:54.18:0,54,982
chr10	100867369	.	CA	C	931.46	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=9.508;DP=525;FS=8.570;HRun=9;HaplotypeScore=66.2176;InbreedingCoeff=0.7853;MQ=67.28;MQ0=2;MQRankSum=0.877;QD=8.39;ReadPosRankSum=2.600;VQSLOD=1.2898;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:41.92:373,42,0	0/1:8,0:8:26.02:26,0,35	0/0:16,0:9:21.56:0,22,165	0/0:19,0:18:27.58:0,28,224	0/0:20,1:21:29.61:0,30,523	0/0:23,0:23:63.14:0,63,686	0/0:20,0:20:48.03:0,48,494	0/0:29,0:29:75.07:0,75,794	0/0:11,0:11:24.07:0,24,274	0/0:25,0:25:66.13:0,66,698	0/0:14,0:14:32.04:0,32,303	1/1:17,0:17:31.89:176,32,0	0/0:20,0:20:54.06:0,54,561	0/0:22,0:22:66.15:0,66,727	0/1:22,0:22:45.42:45,0,64	0/0:21,0:21:54.15:0,54,617	0/0:26,0:26:69.15:0,69,759	0/0:11,0:11:33.07:0,33,364	0/0:16,0:16:36.04:0,36,361	0/0:12,0:12:33.07:0,33,353	0/0:28,0:28:69.39:0,69,808	1/1:8,0:8:20.28:111,20,0	1/1:21,0:20:40.52:221,41,0	1/1:17,0:17:29.03:160,29,0	0/0:11,0:11:33.04:0,33,362	0/0:24,0:24:60.14:0,60,655	0/0:27,0:27:81.16:0,81,883	0/0:18,0:18:51.15:0,51,579
chr10	100867673	.	TTTTTTATTA	T	1609.21	PASS	AB=0.888;AC=14;AF=0.318;AN=44;BaseQRankSum=2.555;DP=239;FS=0.000;HRun=0;HaplotypeScore=75.7906;InbreedingCoeff=0.1831;MQ=66.16;MQ0=7;MQRankSum=-4.956;QD=15.04;ReadPosRankSum=-1.491;VQSLOD=1.8053;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:21,0:7:10.94:0,11,192	0/1:30,0:12:18.01:18,0,157	0/0:10,0:10:27.03:0,27,699	0/0:13,0:13:33.06:0,33,1103	0/0:3,0:3:6:0,6,231	0/1:29,3:28:99:448,0,293	0/0:6,0:6:15.01:0,15,480	0/0:15,0:15:39.12:0,39,1014	0/0:5,0:5:4.15:0,4,131	./.	0/0:9,0:8:18:0,18,503	0/0:4,0:4:2.95:0,3,81	1/1:2,0:2:0.47:1,0,0	1/1:1,1:2:3.01:79,3,0	0/0:26,0:26:69.16:0,69,2650	0/0:13,0:13:36.10:0,36,1348	0/1:13,2:13:99:355,0,193	0/1:4,1:5:73.12:142,0,73	0/1:4,0:4:14.05:14,0,21	./.	./.	./.	0/0:5,0:5:15.05:0,15,475	1/1:6,0:6:14.51:147,15,0	0/1:4,3:7:99:248,0,136	1/1:0,4:4:12.04:298,12,0
chr10	100867682	.	AT	A	623.73	PASS	AB=0.837;AC=15;AF=0.375;AN=40;BaseQRankSum=7.902;DP=235;FS=12.434;HRun=10;HaplotypeScore=46.3504;InbreedingCoeff=0.5096;MQ=62.45;MQ0=8;MQRankSum=-5.243;QD=5.57;ReadPosRankSum=-2.221;VQSLOD=-0.2289;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:26,0:8:11.60:0,12,112	0/1:33,0:11:4.11:44,0,4	0/0:9,0:9:21.05:0,21,229	0/0:11,0:11:27.06:0,27,291	0/0:2,0:2:6.02:0,6,66	0/1:18,13:27:38.15:267,0,38	0/0:4,0:4:12.03:0,12,133	0/0:13,0:13:24.06:0,24,266	./.	./.	0/0:8,0:7:12.01:0,12,123	0/0:1,0:1:3.01:0,3,33	./.	1/1:1,1:2:3.89:28,4,0	0/0:26,0:26:78.20:0,78,853	0/0:15,0:15:42.04:0,42,438	0/1:16,5:19:27.43:128,0,27	1/1:3,3:6:13.19:106,13,0	1/1:3,0:3:2.99:23,3,0	./.	./.	./.	0/0:5,0:6:11.87:0,12,114	1/1:2,1:3:5.42:50,5,0	1/1:5,2:6:12.93:72,13,0	1/1:4,0:4:7.71:53,8,0
chr10	100867710	.	AT	A	1335.89	PASS	AB=1.000;AC=17;AF=0.405;AN=42;BaseQRankSum=6.006;DP=237;FS=5.055;HRun=10;HaplotypeScore=36.9158;InbreedingCoeff=0.7045;MQ=69.38;MQ0=7;MQRankSum=-1.264;QD=11.72;ReadPosRankSum=-1.962;VQSLOD=1.8382;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:25,0:8:11.96:0,12,97	0/1:35,0:9:14.07:14,0,71	0/0:9,0:9:24.06:0,24,265	0/0:12,0:12:33.08:0,33,360	0/0:1,0:1:0:0,0,0	1/1:5,27:29:80.91:686,81,0	0/0:3,0:3:9.02:0,9,100	0/0:7,0:7:18.05:0,18,199	0/0:5,0:5:15.04:0,15,166	./.	0/0:8,0:8:15.04:0,15,166	0/0:2,0:2:6.02:0,6,66	./.	1/1:1,4:5:12:104,12,0	0/0:22,0:22:60.13:0,60,641	0/0:16,0:16:36.02:0,36,364	1/1:6,13:19:5.79:279,6,0	1/1:1,9:10:26.98:231,27,0	1/1:3,0:3:3:26,3,0	./.	./.	./.	0/0:12,0:12:30.08:0,30,332	1/1:0,2:2:6:52,6,0	1/1:1,3:4:8.99:78,9,0	1/1:2,1:3:3:26,3,0
chr10	100868686	.	A	AG	10707.29	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-18.318;DP=611;FS=5.753;HRun=4;HaplotypeScore=54.1089;InbreedingCoeff=0.9974;MQ=86.65;MQ0=0;MQRankSum=-2.853;QD=35.93;ReadPosRankSum=2.095;VQSLOD=5.3051;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:75.25:1026,75,0	1/1:0,14:14:42.14:575,42,0	0/0:27,0:27:69.19:0,69,782	0/0:19,0:20:45.12:0,45,503	0/0:27,0:27:78.22:0,78,885	0/0:26,0:26:75.21:0,75,851	0/0:24,0:24:69.19:0,69,775	1/1:3,21:24:63.21:862,63,0	0/0:25,0:25:75.21:0,75,851	0/0:27,0:27:78.22:0,78,885	0/0:24,0:24:66.16:0,66,729	1/1:3,20:23:60.20:821,60,0	0/0:20,0:20:54.12:0,54,593	0/0:20,0:20:60.17:0,60,676	1/1:0,19:19:57.19:780,57,0	1/1:3,19:22:23.15:705,23,0	0/0:28,0:28:78.21:0,78,874	0/0:17,0:17:48.10:0,48,530	1/1:1,19:20:57.17:762,57,0	1/1:2,25:27:66.22:903,66,0	1/1:1,14:15:42.14:575,42,0	1/1:1,10:11:30.10:410,30,0	1/1:1,20:21:51.17:697,51,0	1/1:2,23:25:54.18:739,54,0	0/0:28,0:28:78.19:0,78,866	1/1:0,20:20:60.17:788,60,0	1/1:1,22:23:63.21:862,63,0	1/1:0,8:8:15.05:205,15,0
chr10	100868994	.	A	AT	2301.03	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-7.239;DP=580;FS=0.000;HRun=4;HaplotypeScore=57.3160;InbreedingCoeff=0.9991;MQ=71.92;MQ0=0;MQRankSum=-0.783;QD=34.86;ReadPosRankSum=2.482;VQSLOD=4.1095;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:90.26:0,90,1021	0/0:9,0:9:27.06:0,27,296	0/0:22,0:19:43.41:0,43,505	0/0:19,0:18:41.70:0,42,459	0/0:24,0:24:69.18:0,69,771	0/0:18,0:18:54.12:0,54,599	0/0:15,0:15:45.13:0,45,510	0/0:29,0:29:74.75:0,75,835	0/0:16,0:16:45.13:0,45,511	0/0:24,0:24:69.20:0,69,782	0/0:19,0:19:54.15:0,54,612	1/1:1,20:21:60.20:820,60,0	0/0:23,0:23:60.16:0,60,670	0/0:18,0:18:48.14:0,48,544	0/0:26,0:26:75.21:0,75,851	0/0:25,0:25:66.12:0,66,708	0/0:22,0:22:53.93:0,54,647	0/0:12,0:12:30.08:0,30,340	0/0:16,0:16:48.14:0,48,543	0/0:30,0:30:84.22:0,84,943	0/0:14,0:14:42.12:0,42,476	1/1:0,12:12:30.10:410,30,0	1/1:0,16:16:45.15:616,45,0	1/1:1,16:17:45.15:615,45,0	0/0:26,0:26:69.19:0,69,783	0/0:28,0:28:69.19:0,69,783	0/0:27,0:27:75.21:0,75,850	0/0:9,0:9:27.08:0,27,306
chr10	100869066	.	G	GGTGT	2058.29	PASS	AB=0.948;AC=26;AF=0.481;AN=54;BaseQRankSum=-4.424;DP=641;FS=8.645;HRun=0;HaplotypeScore=123.5524;InbreedingCoeff=0.4526;MQ=64.08;MQ0=26;MQRankSum=-1.091;QD=5.26;ReadPosRankSum=-2.947;VQSLOD=1.2442;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:2.83:35,3,0	1/1:8,0:8:6.01:66,6,0	./.	0/1:38,0:16:0:0,0,0	0/0:23,0:25:12.03:0,12,153	0/1:14,0:16:25.48:25,0,133	0/0:13,0:15:15.03:0,15,191	1/1:37,0:35:12.82:83,13,0	0/0:10,0:10:9.03:0,9,138	0/0:24,0:23:2.20:0,2,45	0/0:19,0:19:13.75:0,14,158	0/0:9,0:18:25.84:0,26,228	0/0:14,0:18:21.05:0,21,268	0/0:21,0:22:5.69:0,6,355	1/1:13,10:23:18.06:404,18,0	0/1:17,12:30:19.57:419,0,20	0/1:19,0:21:0.03:0,0,210	0/1:13,0:15:35.10:35,0,94	1/1:20,0:19:12.51:177,13,0	1/1:20,0:27:5.48:25,5,0	1/1:20,0:19:0.47:1,0,0	0/0:16,0:18:3:0,3,28	0/0:9,0:14:14.17:0,14,119	0/0:12,0:23:27.92:0,28,253	0/1:18,0:21:6.97:7,0,161	1/1:21,1:29:28.49:380,28,0	1/1:16,13:33:29.22:500,29,0	1/1:12,1:11:5.05:76,5,0
chr10	100869071	.	G	GTGTGTA	343.75	PASS	AB=0.937;AC=7;AF=0.125;AN=56;BaseQRankSum=6.126;DP=674;FS=1.408;HRun=0;HaplotypeScore=153.9785;InbreedingCoeff=-0.1508;MQ=62.73;MQ0=27;MQRankSum=0.189;QD=1.76;ReadPosRankSum=0.677;VQSLOD=2.8427;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,26:47:36.24:83,0,36	0/0:8,0:8:4.01:0,4,128	0/0:43,0:19:41.15:0,41,415	0/0:37,0:15:27.07:0,27,211	0/0:29,0:29:65.39:0,65,677	0/0:17,0:17:19.37:0,19,391	0/0:17,0:17:39.01:0,39,500	0/0:35,0:33:78.35:0,78,646	0/0:10,0:10:27:0,27,353	0/0:29,0:27:63.33:0,63,601	0/0:21,0:21:50.98:0,51,569	0/0:19,0:19:44.83:0,45,564	0/0:21,0:21:53.93:0,54,682	0/0:25,0:25:56.74:0,57,872	0/1:24,0:21:89.42:89,0,173	0/1:30,0:29:91.09:91,0,284	0/0:21,0:21:53.95:0,54,665	0/0:14,0:14:3.53:0,4,276	0/1:20,0:19:39.25:39,0,232	0/0:28,0:27:41.54:0,42,322	0/0:20,0:19:34.14:0,34,263	0/0:20,0:20:35.81:0,36,310	0/0:14,0:14:32.50:0,32,347	0/0:29,0:28:54.03:0,54,669	0/0:22,0:21:26.61:0,27,457	0/1:30,0:30:60.93:61,0,346	0/1:33,0:33:99:102,0,310	0/1:10,0:8:4.33:4,0,115
chr10	100870950	.	GA	G	768.51	PASS	AB=0.831;AC=19;AF=0.339;AN=56;BaseQRankSum=1.834;DP=465;FS=1.033;HRun=15;HaplotypeScore=61.2168;InbreedingCoeff=0.1958;MQ=56.45;MQ0=6;MQRankSum=2.993;QD=3.45;ReadPosRankSum=4.583;VQSLOD=-0.2781;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,1:33:52.90:0,53,395	0/0:6,0:7:14.20:0,14,70	0/1:6,0:4:10.40:10,0,29	0/1:10,1:7:16.60:17,0,37	0/0:24,2:26:12.14:0,12,312	0/1:14,5:19:35.10:35,0,204	0/0:13,0:14:16.92:0,17,146	1/1:11,7:19:0.14:114,0,0	0/0:11,0:11:12:0,12,106	0/0:23,2:24:19.49:0,19,269	0/0:12,0:12:18.89:0,19,121	0/0:5,0:16:20.20:0,20,123	0/0:15,1:16:16.67:0,17,252	0/0:18,1:19:16.71:0,17,262	0/0:13,0:13:11.59:0,12,66	1/1:7,7:14:21.55:127,22,0	0/0:18,1:19:16.73:0,17,271	0/1:11,3:14:37.09:37,0,77	0/1:8,5:15:20.85:86,0,21	1/1:11,13:25:1.06:131,1,0	1/1:8,6:16:15.05:87,15,0	0/1:3,1:9:6.38:6,0,37	0/0:6,0:8:11.27:0,11,87	0/0:8,0:20:20.04:0,20,112	0/1:17,3:20:33.40:33,0,129	0/1:8,8:19:14.87:135,0,15	1/1:8,8:16:11.64:77,12,0	0/1:15,1:16:6.09:45,0,6
chr10	100872276	.	C	CTGTTGTATACTCACAGT	48056.88	PASS	AB=0.704;AC=29;AF=0.518;AN=56;BaseQRankSum=-2.951;DP=598;FS=95.690;HRun=0;HaplotypeScore=237.0271;InbreedingCoeff=0.9243;MQ=76.86;MQ0=0;MQRankSum=-18.322;QD=159.13;ReadPosRankSum=1.174;VQSLOD=1.8231;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,11:33:54.14:4161,54,0	1/1:5,3:8:21.07:1663,21,0	0/0:19,0:19:51.17:0,51,2055	0/0:25,0:25:54.18:0,54,2072	0/0:27,0:27:72.25:0,72,3432	0/0:26,0:26:69.24:0,69,3181	0/0:22,0:22:60.19:0,60,2704	1/1:24,0:24:60.16:3538,60,0	0/0:22,0:22:66.21:0,66,2897	0/0:15,0:15:42.14:0,42,1968	0/0:13,0:13:36.12:0,36,1716	1/1:10,6:18:45.15:3111,45,0	0/0:19,0:19:54.19:0,54,2616	0/0:33,0:33:99:0,99,4384	1/1:9,7:23:42.07:2835,42,0	1/1:12,8:24:51.18:4031,51,0	0/0:35,0:35:99:0,99,4737	0/0:25,0:25:66.23:0,66,3122	1/1:11,3:16:38.14:1618,38,0	1/1:14,15:30:81.23:5838,81,0	1/1:9,4:14:18.06:1315,18,0	1/1:4,5:10:30.06:2013,30,0	1/1:11,5:16:36.08:2392,36,0	1/1:3,5:14:24.08:1910,24,0	0/0:15,0:15:42.14:0,42,1860	0/1:22,14:38:99:7280,0,182	1/1:16,8:25:75.21:5256,75,0	1/1:2,3:6:15.05:1095,15,0
chr10	100873247	.	A	AT	5201.21	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-13.909;DP=640;FS=3.484;HRun=9;HaplotypeScore=61.1811;InbreedingCoeff=0.9975;MQ=75.37;MQ0=0;MQRankSum=-3.234;QD=25.25;ReadPosRankSum=-2.701;VQSLOD=4.6553;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:54.15:597,54,0	0/0:3,0:15:21.96:0,22,65	0/0:13,0:12:26.65:0,27,212	0/0:12,0:12:20.99:0,21,182	0/0:34,0:35:85.99:0,86,732	0/0:30,0:29:83.98:0,84,729	0/0:21,0:21:21.47:0,21,341	1/1:7,19:26:40.09:652,40,0	0/0:21,0:21:53.93:0,54,461	0/0:29,0:29:71.97:0,72,622	0/0:31,0:31:74.94:0,75,647	0/0:19,0:19:44.99:0,45,391	0/0:30,0:30:77.96:0,78,677	0/0:26,0:26:59.95:0,60,517	0/0:2,0:20:30.55:0,31,90	1/1:6,9:16:32.92:346,33,0	0/0:13,0:13:29.99:0,30,260	0/0:23,0:23:50.98:0,51,443	1/1:6,21:27:40.33:671,40,0	1/1:3,26:29:75.13:804,75,0	1/1:5,18:23:48.13:531,48,0	0/0:23,0:23:68.98:0,69,596	0/0:36,0:36:95.97:0,96,833	0/0:15,0:15:35.97:0,36,309	0/0:21,0:22:53.02:0,53,449	1/1:3,21:25:42.95:676,43,0	1/1:5,22:27:40.10:659,40,0	1/1:1,10:11:24.06:265,24,0
chr10	100873343	.	G	GT	6741.23	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-13.183;DP=581;FS=0.000;HRun=9;HaplotypeScore=58.7833;InbreedingCoeff=0.9684;MQ=74.88;MQ0=0;MQRankSum=-1.019;QD=25.06;ReadPosRankSum=-0.746;VQSLOD=5.1691;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,15:20:25.09:505,25,0	0/0:11,0:11:29.97:0,30,254	0/0:17,0:14:22.88:0,23,184	0/0:16,0:16:25.71:0,26,247	0/0:21,1:22:26.77:0,27,453	0/0:30,1:31:47.76:0,48,640	0/0:19,0:19:47.98:0,48,414	1/1:9,18:27:54.13:588,54,0	0/0:21,1:22:26.81:0,27,461	0/0:36,0:36:98.92:0,99,851	0/0:25,0:25:68.47:0,68,581	1/1:2,20:22:51.14:564,51,0	0/0:13,0:13:16.47:0,16,263	0/0:26,0:27:65:0,65,553	0/0:14,1:15:8.81:0,9,305	1/1:3,15:19:9.71:320,10,0	0/0:18,0:19:52.96:0,53,435	0/0:26,1:28:34.86:0,35,517	1/1:4,16:22:59.82:618,60,0	1/1:14,20:34:84.15:875,84,0	1/1:2,12:14:7.04:306,7,0	1/1:1,17:18:48.12:524,48,0	1/1:3,24:27:63.64:698,64,0	1/1:2,7:9:18.05:199,18,0	0/0:11,0:11:26.99:0,27,232	1/1:4,15:19:22.09:461,22,0	1/1:7,17:24:69.08:718,69,0	1/1:0,14:14:33.09:365,33,0
chr10	100873506	.	C	CA	770.66	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.934;DP=651;FS=1.647;HRun=8;HaplotypeScore=60.7543;InbreedingCoeff=0.9946;MQ=79.18;MQ0=1;MQRankSum=-3.903;QD=27.52;ReadPosRankSum=-0.036;VQSLOD=4.1660;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:75.22:866,75,0	0/0:13,0:13:36.02:0,36,329	0/0:26,0:26:69.02:0,69,623	0/0:14,0:14:26.99:0,27,240	0/0:30,0:30:90.04:0,90,819	0/0:35,0:35:93.04:0,93,847	0/0:18,0:18:48:0,48,435	0/0:28,0:29:77.06:0,77,688	0/0:23,0:23:66.03:0,66,604	0/0:42,0:42:99:0,111,1010	0/0:38,0:38:99:0,105,945	0/0:17,0:17:51.01:0,51,462	0/0:25,0:25:66.03:0,66,604	0/0:26,0:26:69.02:0,69,628	0/0:23,0:23:69.01:0,69,622	0/0:17,0:17:42.02:0,42,384	0/0:26,0:26:66.02:0,66,604	0/0:17,0:17:50.93:0,51,449	0/0:22,0:22:59.63:0,60,531	0/0:36,0:36:99:0,102,933	0/0:16,0:16:45.02:0,45,412	0/0:16,0:16:45.01:0,45,408	0/0:23,0:23:57.01:0,57,521	0/0:16,0:15:42:0,42,379	0/0:18,0:18:54.02:0,54,491	0/0:26,0:26:68.83:0,69,617	0/0:21,0:21:54.03:0,54,494	0/0:10,0:10:20.99:0,21,192
chr10	100874203	.	A	AT	700.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.723;DP=697;FS=0.000;HRun=9;HaplotypeScore=95.3409;InbreedingCoeff=0.9372;MQ=77.40;MQ0=0;MQRankSum=-1.479;QD=25.93;ReadPosRankSum=-1.115;VQSLOD=3.0749;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:27:72.19:795,72,0	0/0:9,0:10:29.03:0,29,240	0/0:18,0:18:26.95:0,27,228	0/0:16,0:16:8.85:0,9,130	0/0:27,1:28:41.86:0,42,588	0/0:31,2:33:53.79:0,54,696	0/0:22,0:22:52.11:0,52,507	0/0:28,1:30:40.82:0,41,571	0/0:14,0:14:38.97:0,39,335	0/0:35,0:35:51.28:0,51,670	0/0:32,1:33:53.79:0,54,696	0/0:19,0:19:50.97:0,51,439	0/0:21,1:22:20.78:0,21,406	0/0:22,1:23:29.81:0,30,488	0/0:16,0:16:44.99:0,45,391	0/0:18,0:18:44.97:0,45,386	0/0:33,0:33:83.98:0,84,729	0/0:17,0:17:38.98:0,39,339	0/0:18,0:18:44.99:0,45,390	0/0:26,0:26:59.95:0,60,518	0/0:34,0:34:92.98:0,93,807	0/0:32,0:32:80.96:0,81,703	0/0:20,0:20:47.97:0,48,417	0/0:29,0:29:71.83:0,72,598	0/0:31,0:31:92.98:0,93,807	0/0:37,0:37:95.97:0,96,833	0/0:40,0:40:99:0,113,957	0/0:15,0:15:41.98:0,42,365
chr10	100875738	.	TC	T	7085.19	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.574;DP=792;FS=3.447;HRun=3;HaplotypeScore=83.4410;InbreedingCoeff=0.9986;MQ=79.67;MQ0=0;MQRankSum=-2.055;QD=34.56;ReadPosRankSum=1.097;VQSLOD=5.4236;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.32:0,96,1382	0/0:13,0:13:39.13:0,39,562	0/0:29,0:28:81.26:0,81,1131	0/0:33,0:32:62.15:0,62,1001	0/0:31,0:31:93.31:0,93,1337	0/0:32,0:32:93.31:0,93,1337	0/0:27,0:27:81.26:0,81,1148	1/1:1,26:27:78.23:956,78,0	0/0:24,0:24:69.23:0,69,993	0/0:36,0:36:99:0,105,1511	0/0:24,0:24:69.21:0,69,973	0/0:43,0:43:99:0,123,1771	0/0:36,0:36:99:0,102,1468	0/0:31,0:31:93.31:0,93,1339	0/0:30,0:30:90.29:0,90,1278	1/1:0,21:21:63.20:781,63,0	0/0:31,0:31:93.31:0,93,1337	0/0:17,0:17:48.16:0,48,691	1/1:1,15:16:45.14:558,45,0	1/1:0,35:35:99:1227,99,0	1/1:0,27:27:69.22:856,69,0	0/0:29,0:29:84.27:0,84,1174	0/0:29,0:29:81.25:0,81,1143	0/0:31,0:31:93.31:0,93,1338	0/0:26,0:26:78.26:0,78,1121	1/1:2,36:38:68.13:1296,68,0	1/1:0,35:35:96.30:1188,96,0	1/1:0,6:6:18.06:223,18,0
chr10	100875810	.	GC	G	5576.77	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.500;DP=767;FS=4.767;HRun=1;HaplotypeScore=75.5620;InbreedingCoeff=0.9963;MQ=83.72;MQ0=0;MQRankSum=-2.836;QD=36.69;ReadPosRankSum=3.216;VQSLOD=5.4934;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,43:43:99:1468,105,0	0/0:11,0:11:33.11:0,33,525	0/0:25,0:25:74.67:0,75,1042	0/0:19,0:19:57.19:0,57,897	0/0:32,0:32:96.33:0,96,1525	0/0:24,0:24:72.25:0,72,1148	0/0:20,0:20:60.20:0,60,954	0/0:41,0:41:99:0,123,1919	0/0:21,0:21:63.21:0,63,1005	0/0:30,0:30:90.29:0,90,1400	0/0:32,0:32:96.33:0,96,1534	1/1:0,30:30:81.27:1133,81,0	0/0:29,0:29:84.29:0,84,1332	0/0:23,0:23:69.24:0,69,1103	0/0:31,0:31:90.27:0,90,1388	0/0:21,0:21:63.21:0,63,1007	0/0:31,0:31:93.32:0,93,1484	0/0:24,0:24:72.25:0,72,1151	0/0:22,0:22:66.21:0,66,1011	0/0:29,0:29:87.30:0,87,1391	0/0:38,0:38:99:0,105,1675	1/1:0,25:25:69.23:964,69,0	1/1:0,30:30:78.26:1089,78,0	1/1:0,24:24:66.22:923,66,0	0/0:33,0:33:99:0,99,1538	0/0:32,0:32:96.33:0,96,1533	0/0:42,0:41:99:0,123,1932	0/0:5,0:5:15.05:0,15,240
chr10	100876052	.	A	AT	3018.80	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-12.442;DP=700;FS=2.381;HRun=8;HaplotypeScore=68.5186;InbreedingCoeff=0.9940;MQ=71.03;MQ0=0;MQRankSum=-0.150;QD=28.21;ReadPosRankSum=3.005;VQSLOD=4.2680;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.03:0,75,682	0/0:0,0:13:19.70:0,20,62	0/0:10,0:10:20.99:0,21,186	0/0:11,0:11:22.23:0,22,186	0/0:34,0:35:99:0,104,935	0/0:32,0:32:81.02:0,81,737	0/0:25,0:25:60.01:0,60,545	0/0:38,0:38:99:0,102,933	0/0:23,0:23:63.03:0,63,576	0/0:39,0:39:99:0,111,1016	0/0:22,0:22:57.02:0,57,521	1/1:1,28:29:75.22:866,75,0	0/0:30,0:30:75.02:0,75,686	0/0:36,0:36:99:0,108,988	0/0:1,0:24:37.37:0,37,115	0/0:18,0:18:48.01:0,48,435	0/0:26,0:26:69.03:0,69,631	0/0:20,0:20:54.03:0,54,494	0/0:19,0:19:51.01:0,51,462	0/0:33,0:33:90.05:0,90,823	0/0:13,0:13:33.02:0,33,302	1/1:4,28:32:81.24:935,81,0	1/1:0,30:32:89.54:998,90,0	1/1:3,11:14:33.10:381,33,0	0/0:24,0:24:72.02:0,72,654	0/0:34,0:34:87.03:0,87,796	0/0:37,0:36:98.98:0,99,893	0/0:6,0:6:18.01:0,18,165
chr10	100878079	.	CCCTT	C	1781.52	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=8.256;DP=404;FS=20.619;HRun=0;HaplotypeScore=82.3755;InbreedingCoeff=0.5393;MQ=49.08;MQ0=8;MQRankSum=-7.453;QD=12.82;ReadPosRankSum=1.388;VQSLOD=1.3068;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:0.29:21,0,0	0/1:5,0:5:14.32:14,0,47	0/0:19,0:6:5.71:0,6,32	0/0:14,0:2:5.67:0,6,29	0/0:18,0:18:51.14:0,51,1088	0/0:14,0:14:36.01:0,36,716	0/0:27,0:27:42.92:0,43,1085	1/1:14,0:10:11.93:90,12,0	0/0:15,0:15:45.03:0,45,798	0/0:27,0:27:69.20:0,69,1385	0/0:18,0:18:48.14:0,48,1135	0/1:9,0:9:24.25:33,0,24	0/0:23,0:23:49.37:0,49,932	0/0:29,0:29:64.74:0,65,1590	1/1:4,0:7:17.89:149,18,0	1/1:6,4:10:24:305,24,0	0/0:22,0:22:35.39:0,35,955	0/0:18,0:18:50.73:0,51,908	1/1:2,5:5:11.94:93,12,0	1/1:9,3:12:30.03:389,30,0	1/1:8,0:8:11.85:84,12,0	0/1:15,0:14:18.46:57,0,18	0/1:6,0:6:15.31:15,0,68	0/1:11,0:11:35.02:55,0,35	0/0:21,0:21:54.08:0,54,983	1/1:14,6:19:27.84:513,28,0	1/1:3,2:5:8.97:97,9,0	1/1:3,0:2:6:68,6,0
chr10	100878088	.	CCTTCCTTT	C	2690.98	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=7.638;DP=387;FS=28.962;HRun=0;HaplotypeScore=110.9671;InbreedingCoeff=0.5183;MQ=49.23;MQ0=6;MQRankSum=-8.402;QD=21.19;ReadPosRankSum=-2.196;VQSLOD=1.2004;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:6:25.76:26,0,26	0/1:5,0:5:28.91:63,0,29	0/0:10,0:3:5.71:0,6,32	0/0:10,0:2:5.67:0,6,29	0/0:17,0:17:51.15:0,51,1897	0/0:12,0:12:36.01:0,36,1218	0/0:28,0:28:72.98:0,73,2055	1/1:9,0:4:11.93:90,12,0	0/0:18,0:18:54.09:0,54,1417	0/0:24,0:24:69.21:0,69,2283	0/0:19,0:19:57.17:0,57,2101	0/1:6,0:6:10.12:10,0,131	0/0:26,0:26:72.16:0,72,1854	0/0:30,0:30:90.25:0,90,2936	1/1:7,0:6:18.05:271,18,0	1/1:7,1:8:24:394,24,0	0/0:23,0:23:62.76:0,63,1765	0/0:18,0:18:53.48:0,53,1602	1/1:5,0:4:11.94:93,12,0	1/1:12,3:15:38.84:669,39,0	1/1:7,1:8:11.84:84,12,0	0/1:13,0:12:44.96:45,0,102	0/1:6,0:6:6.97:7,0,153	0/1:9,0:9:27.73:28,0,112	0/0:25,0:25:69.16:0,69,1949	1/1:15,4:18:12.42:829,12,0	1/1:6,1:7:11.99:162,12,0	1/1:3,1:3:8.95:125,9,0
chr10	100878092	.	C	CTTTCTTT	287.06	PASS	AB=0.884;AC=5;AF=0.089;AN=56;BaseQRankSum=5.200;DP=396;FS=3.229;HRun=0;HaplotypeScore=118.2177;InbreedingCoeff=-0.0000;MQ=49.00;MQ0=5;MQRankSum=-3.607;QD=5.22;ReadPosRankSum=0.904;VQSLOD=2.3451;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:6:11.08:0,11,69	0/0:5,0:5:1.36:0,1,131	0/0:7,0:2:6.02:0,6,81	0/0:11,0:2:6.02:0,6,88	0/0:18,0:18:54.15:0,54,1271	0/0:13,0:13:36.10:0,36,830	0/0:31,0:31:89.97:0,90,1757	0/0:10,0:4:11.78:0,12,74	0/0:18,0:18:49.87:0,50,1052	0/0:24,0:24:72.24:0,72,1679	0/0:20,0:20:60.16:0,60,1441	0/1:5,1:6:51.32:86,0,51	0/0:27,0:27:78.20:0,78,1545	0/0:29,0:30:90.31:0,90,2155	0/0:7,0:7:3.37:0,3,103	0/0:10,0:9:23.85:0,24,281	0/1:23,0:23:23.35:23,0,1237	0/0:17,0:18:53.93:0,54,1176	0/0:6,0:5:11.65:0,12,67	0/0:16,0:16:38.82:0,39,514	0/0:8,0:9:11.88:0,12,86	0/1:11,1:11:95.16:95,0,132	0/1:4,2:6:0.90:181,0,1	0/1:7,1:8:17.17:17,0,59	0/0:23,0:23:69.22:0,69,1529	0/0:20,0:19:30.27:0,30,691	0/0:8,0:8:11.93:0,12,135	0/0:3,0:2:6.02:0,6,91
chr10	100878127	.	TTC	T	360.76	PASS	AB=0.934;AC=13;AF=0.241;AN=54;BaseQRankSum=5.580;DP=424;FS=0.000;HRun=0;HaplotypeScore=93.9262;InbreedingCoeff=0.3765;MQ=47.28;MQ0=3;MQRankSum=-5.535;QD=4.24;ReadPosRankSum=-0.711;VQSLOD=2.3474;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,3:5:6.02:76,6,0	0/1:5,0:5:6.98:7,0,99	0/0:12,0:2:3.01:0,3,50	0/0:18,0:1:2.84:0,3,14	0/0:25,0:25:66.23:0,66,1080	0/0:15,0:15:36.11:0,36,561	0/0:30,0:29:63.69:0,64,1012	0/1:13,0:3:14.34:14,0,17	0/0:23,0:23:66.22:0,66,1054	0/0:25,0:25:60.16:0,60,915	0/0:24,0:24:60.20:0,60,982	1/1:6,0:6:12:110,12,0	0/0:29,0:29:75.26:0,75,1247	0/0:29,0:29:72.25:0,72,1157	0/1:6,1:6:20.54:21,0,44	0/0:8,1:8:19.60:0,20,237	0/0:29,0:29:70.75:0,71,1036	0/0:20,0:20:42.14:0,42,680	0/0:5,0:3:3.01:0,3,46	0/1:23,1:24:6.26:6,0,679	0/0:6,0:7:7.27:0,7,100	1/1:8,0:7:14.99:133,15,0	./.	1/1:6,0:6:9.02:91,9,0	0/0:19,0:19:54.18:0,54,897	0/0:14,0:15:26.98:0,27,385	0/1:8,2:10:61.23:61,0,110	0/0:2,0:2:5.95:0,6,64
chr10	100878139	.	CTT	C	502.43	PASS	AB=0.890;AC=11;AF=0.196;AN=56;BaseQRankSum=5.547;DP=408;FS=0.784;HRun=3;HaplotypeScore=90.1532;InbreedingCoeff=0.4306;MQ=47.71;MQ0=5;MQRankSum=-5.434;QD=7.28;ReadPosRankSum=2.084;VQSLOD=0.4305;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:5.92:46,6,0	0/0:5,0:5:10.93:0,11,146	0/0:12,0:2:3.01:0,3,56	0/0:16,0:1:1.82:0,2,5	0/0:23,0:23:66.22:0,66,1222	0/0:15,0:15:42.08:0,42,686	0/0:28,0:27:51.20:0,51,1142	1/1:12,1:3:3.01:44,3,0	0/0:23,0:23:69.22:0,69,1221	0/0:24,0:24:69.18:0,69,1106	0/0:23,0:23:69.15:0,69,1172	1/1:1,4:5:14.98:200,15,0	0/0:31,0:31:90.25:0,90,1572	0/0:24,0:24:72.25:0,72,1329	0/0:6,0:5:6.44:0,6,85	0/0:9,0:8:8.13:0,8,176	0/0:27,0:27:74.45:0,74,1213	0/0:20,0:20:57.08:0,57,851	0/0:3,0:2:3:0,3,25	0/1:21,2:23:22.24:22,0,430	0/0:6,0:6:8.96:0,9,79	1/1:1,5:5:15.05:228,15,0	0/0:1,1:2:2.97:0,3,20	0/1:4,2:6:7.02:94,0,7	0/0:24,0:24:72.21:0,72,1203	0/0:14,1:15:7.43:0,7,304	0/1:11,0:10:19.55:20,0,70	0/0:2,0:2:2.60:0,3,27
chr10	100878167	.	CCTTCCT	C	459.23	PASS	AB=0.880;AC=10;AF=0.185;AN=54;BaseQRankSum=6.910;DP=385;FS=12.101;HRun=0;HaplotypeScore=119.1770;InbreedingCoeff=0.2490;MQ=49.36;MQ0=15;MQRankSum=-7.095;QD=6.29;ReadPosRankSum=-0.593;VQSLOD=1.5509;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:6.02:111,6,0	0/1:2,1:3:46.44:46,0,112	./.	0/0:21,0:2:0:0,0,0	0/0:20,0:20:57.16:0,57,1495	0/0:14,0:14:39.13:0,39,1276	0/0:15,0:14:42.14:0,42,1176	0/0:8,0:2:2.70:0,3,6	0/0:21,0:21:63.21:0,63,1997	0/0:25,0:25:75.25:0,75,2320	0/0:20,0:20:60.20:0,60,1881	0/0:7,0:7:18.06:0,18,275	0/0:34,0:33:93.31:0,93,3021	0/0:20,0:19:54.18:0,54,1649	0/1:2,2:3:48.26:103,0,48	0/1:9,1:9:24.42:24,0,68	0/0:25,0:25:66.59:0,67,1793	0/0:21,0:21:57.18:0,57,1504	0/1:6,0:2:7.27:13,0,7	0/1:20,1:21:96.30:96,0,246	0/0:5,0:5:5.81:0,6,32	0/0:9,0:8:24.05:0,24,291	0/0:7,0:7:21.04:0,21,257	0/0:6,0:6:15.04:0,15,199	0/0:26,0:26:78.27:0,78,2460	0/1:11,0:11:3.66:4,0,164	1/1:12,2:13:11.98:202,12,0	0/0:1,0:1:2.04:0,2,6
chr10	100878183	.	C	CTT	630.48	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=10.334;DP=428;FS=1.155;HRun=1;HaplotypeScore=99.1572;InbreedingCoeff=0.3144;MQ=49.02;MQ0=14;MQRankSum=-10.232;QD=5.63;ReadPosRankSum=0.019;VQSLOD=-0.4137;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:5.16:24,5,0	0/0:3,0:3:8.23:0,8,42	0/0:12,0:2:3.01:0,3,39	0/0:28,0:4:2.91:0,3,27	0/0:18,0:18:50.31:0,50,697	0/0:16,0:16:44.97:0,45,592	0/0:20,0:19:53.61:0,54,720	0/0:7,0:3:2.99:0,3,24	0/0:21,0:21:63.16:0,63,892	0/0:28,0:28:84.22:0,84,1205	0/0:21,0:21:63.12:0,63,833	0/1:10,0:10:20.72:21,0,126	0/0:36,0:36:99:0,102,1331	0/0:18,0:17:51.13:0,51,716	0/1:6,0:5:7.68:8,0,42	1/1:11,1:11:17.33:138,17,0	0/0:21,0:21:31.29:0,31,763	0/0:24,0:24:63.10:0,63,848	0/1:6,0:3:14.17:14,0,37	1/1:25,2:26:18.52:396,19,0	./.	0/1:11,0:11:4.80:5,0,125	0/0:9,0:9:26.91:0,27,272	0/1:6,0:6:0.32:0,0,131	0/0:30,0:30:87.18:0,87,1140	0/1:13,0:13:15.49:49,0,15	1/1:15,1:14:14.44:109,14,0	0/1:2,0:2:12.04:29,0,12
chr10	100878184	.	TC	T	195.58	PASS	AB=0.777;AC=8;AF=0.143;AN=56;BaseQRankSum=8.246;DP=431;FS=2.225;HRun=1;HaplotypeScore=94.5412;InbreedingCoeff=0.0471;MQ=49.03;MQ0=14;MQRankSum=-8.492;QD=2.44;ReadPosRankSum=3.446;VQSLOD=-0.3982;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:2.99:0,3,23	0/0:3,0:3:9.01:0,9,96	0/0:12,0:2:3.01:0,3,48	0/0:28,0:4:3.01:0,3,38	0/0:19,0:19:54.17:0,54,811	0/0:16,0:16:48.16:0,48,726	0/0:21,0:20:60.19:0,60,896	0/0:7,0:3:6.02:0,6,77	0/0:21,0:21:63.21:0,63,978	0/0:28,0:28:82.16:0,82,1267	0/0:21,0:21:63.20:0,63,944	0/0:10,0:10:25.58:0,26,324	0/0:36,0:36:99:0,105,1571	0/0:18,0:17:51.17:0,51,785	0/0:6,0:5:8.98:0,9,94	1/1:6,6:11:1.52:62,2,0	0/0:21,0:21:55.07:0,55,887	0/0:24,0:24:63.21:0,63,977	0/1:6,1:4:11.99:12,0,54	0/1:19,8:26:99:101,0,100	0/1:5,0:5:0:0,0,0	0/0:12,0:11:27.93:0,28,379	0/0:9,0:9:26.99:0,27,372	0/0:6,0:6:1.81:0,2,188	0/0:30,0:30:90.30:0,90,1370	0/1:8,4:12:27.41:27,0,136	0/1:5,10:13:40.97:103,0,41	0/1:1,1:2:8.31:8,0,15
chr10	100878186	.	TC	T	210.41	PASS	AB=0.761;AC=7;AF=0.125;AN=56;BaseQRankSum=8.166;DP=437;FS=2.197;HRun=1;HaplotypeScore=94.7732;InbreedingCoeff=0.0116;MQ=49.13;MQ0=14;MQRankSum=-8.174;QD=2.63;ReadPosRankSum=2.675;VQSLOD=-0.2340;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:2.92:0,3,18	0/0:3,0:3:5.98:0,6,58	0/0:12,0:2:6.02:0,6,83	0/0:29,0:4:3.01:0,3,38	0/0:19,0:19:51.17:0,51,786	0/0:17,0:17:51.16:0,51,751	0/0:24,0:23:69.22:0,69,1005	0/0:7,0:3:5.96:0,6,54	0/0:22,0:22:66.19:0,66,986	0/0:28,0:28:82.16:0,82,1268	0/0:21,0:21:63.20:0,63,944	0/0:10,0:10:26.45:0,26,187	0/0:35,0:35:99:0,102,1521	0/0:18,0:17:51.16:0,51,771	0/0:7,0:6:8.86:0,9,85	0/1:6,6:11:3.28:59,0,3	0/0:21,0:21:58.70:0,59,900	0/0:24,0:24:66.19:0,66,996	0/1:6,1:4:11.15:11,0,52	0/1:19,8:26:87.31:118,0,87	0/1:5,0:5:0:0,0,0	0/0:12,0:11:13.56:0,14,168	0/0:9,0:9:26.50:0,27,190	0/0:6,0:6:17.60:0,18,118	0/0:30,0:30:87.25:0,87,1300	0/1:8,4:12:27.53:28,0,125	0/1:5,10:13:25.39:104,0,25	0/1:1,1:2:8.31:8,0,13
chr10	100878213	.	CCT	C	620.43	PASS	AB=0.887;AC=13;AF=0.232;AN=56;BaseQRankSum=7.334;DP=486;FS=3.049;HRun=0;HaplotypeScore=118.9844;InbreedingCoeff=0.1602;MQ=44.84;MQ0=23;MQRankSum=-6.202;QD=6.02;ReadPosRankSum=2.346;VQSLOD=3.2493;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:0.46:1,0,0	0/1:4,0:4:11.09:20,0,11	0/0:14,0:4:9.03:0,9,150	0/0:39,0:4:6.01:0,6,122	0/0:17,0:17:51.17:0,51,935	0/0:16,0:16:48.16:0,48,938	0/0:25,0:25:75.12:0,75,1342	0/0:27,0:6:13.51:0,14,155	0/0:16,0:16:48.16:0,48,866	0/0:24,0:24:72.23:0,72,1307	0/0:18,0:18:54.18:0,54,1024	0/1:3,5:8:15.97:223,0,16	0/0:31,0:31:90.31:0,90,1681	0/0:23,0:22:66.20:0,66,1184	0/1:11,0:11:9.18:9,0,23	0/0:18,1:19:19.96:0,20,118	0/0:21,0:21:11.36:0,11,980	0/0:24,0:24:69.23:0,69,1272	0/1:10,0:8:11.45:11,0,127	0/0:27,1:27:38.90:0,39,238	1/1:6,1:6:3.01:46,3,0	1/1:9,4:11:26.61:254,27,0	0/1:14,3:15:20.61:123,0,21	0/1:5,1:6:43.25:43,0,58	0/0:26,0:26:78.27:0,78,1508	0/0:13,1:14:14.90:0,15,161	0/1:20,3:21:38.17:38,0,200	0/0:1,0:1:2.68:0,3,11
chr10	100878215	.	T	TTC	954.09	PASS	AB=0.942;AC=12;AF=0.214;AN=56;BaseQRankSum=6.125;DP=502;FS=0.643;HRun=0;HaplotypeScore=128.0177;InbreedingCoeff=0.4468;MQ=44.52;MQ0=23;MQRankSum=-5.187;QD=10.48;ReadPosRankSum=1.428;VQSLOD=3.5946;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:0.47:1,0,0	0/1:4,0:4:0.90:1,0,22	0/0:14,0:4:6.02:0,6,76	0/0:38,0:3:6.02:0,6,76	0/0:18,0:18:45.13:0,45,559	0/0:16,0:16:39.02:0,39,474	0/0:25,0:25:52.27:0,52,843	0/0:27,0:6:9.50:0,10,70	0/0:15,0:15:39.11:0,39,481	0/0:24,0:24:63.18:0,63,774	0/0:18,0:18:51.14:0,51,634	0/1:9,1:10:0.64:244,0,1	0/0:32,0:32:84.26:0,84,1057	0/0:23,0:22:51.16:0,51,649	0/0:11,0:11:11.01:0,11,54	0/0:22,0:20:32.82:0,33,142	0/0:20,0:20:23.28:0,23,572	0/0:27,0:27:56.13:0,56,813	0/0:10,0:8:12.38:0,12,96	0/0:29,0:28:40.61:0,41,193	1/1:8,0:7:3.01:46,3,0	1/1:12,5:15:14.04:402,14,0	0/1:15,3:16:29.97:326,0,30	1/1:6,1:7:3.60:52,4,0	0/0:26,0:26:78.25:0,78,991	0/0:15,0:15:15.02:0,15,54	0/1:24,0:22:19.75:20,0,79	0/0:1,0:1:2.37:0,2,8
chr10	100878229	.	CTTTCTT	C	1985.06	PASS	AB=0.844;AC=9;AF=0.161;AN=56;BaseQRankSum=6.112;DP=521;FS=23.472;HRun=0;HaplotypeScore=155.0228;InbreedingCoeff=-0.0051;MQ=43.85;MQ0=27;MQRankSum=-9.100;QD=12.25;ReadPosRankSum=0.296;VQSLOD=1.5330;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:8.98:0,9,128	0/1:7,0:7:34.07:172,0,34	0/0:9,0:3:6.02:0,6,95	0/0:28,0:1:3.01:0,3,60	0/0:16,0:16:48.16:0,48,1662	0/0:16,0:16:45.15:0,45,1406	0/0:22,0:22:46.29:0,46,2104	0/1:34,0:6:45.79:52,0,46	0/0:15,0:15:45.15:0,45,1482	0/0:22,0:22:60.20:0,60,1806	0/0:22,0:22:66.17:0,66,1993	0/0:10,0:10:10.91:0,11,496	0/0:30,0:30:90.29:0,90,2982	0/0:22,0:21:63.22:0,63,2005	1/1:12,0:12:10.59:142,11,0	0/1:15,7:20:99:324,0,918	0/0:23,0:23:53.14:0,53,1968	0/0:25,0:25:75.25:0,75,2365	0/1:12,2:8:88.70:89,0,397	0/1:17,9:25:99:550,0,804	0/0:8,1:8:8.99:0,9,76	0/0:25,0:23:38.14:0,38,768	0/0:22,0:20:35.07:0,35,702	0/0:8,0:7:6.56:0,7,302	0/0:27,0:27:75.21:0,75,2228	0/1:16,5:20:99:292,0,765	0/1:16,10:24:99:507,0,791	0/0:2,0:1:3.01:0,3,110
chr10	100878231	.	TTCTTTCTC	T	3156.16	PASS	AB=0.982;AC=14;AF=0.250;AN=56;BaseQRankSum=8.197;DP=535;FS=36.641;HRun=0;HaplotypeScore=174.5857;InbreedingCoeff=-0.1611;MQ=43.94;MQ0=29;MQRankSum=-12.016;QD=12.78;ReadPosRankSum=-3.889;VQSLOD=0.3720;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:12.04:0,12,169	0/1:7,0:7:58.06:141,0,58	0/0:8,0:2:3.01:0,3,43	0/0:26,0:1:3.01:0,3,40	0/0:17,0:17:51.08:0,51,1540	0/0:17,0:17:48.07:0,48,1141	0/0:22,0:22:63.08:0,63,1552	0/1:37,0:7:12.06:50,0,12	0/0:16,0:16:48.03:0,48,1331	0/0:21,0:21:60.16:0,60,1545	0/0:23,0:23:59.86:0,60,1878	0/1:13,0:13:99:212,0,458	0/0:30,0:30:81.23:0,81,2783	0/0:22,0:21:63.15:0,63,1855	1/1:12,0:12:11.90:138,12,0	0/1:23,0:21:99:424,0,609	0/0:23,0:23:63.05:0,63,1877	0/0:27,0:27:72.06:0,72,2107	0/1:14,0:8:99:124,0,241	0/1:28,0:27:99:597,0,636	0/1:9,0:8:7.81:48,0,8	0/1:24,3:25:99:319,0,439	0/1:22,0:20:99:259,0,321	0/1:7,1:7:72.57:85,0,73	0/0:26,0:26:63.16:0,63,1821	0/1:20,0:19:99:304,0,580	0/1:27,0:25:99:612,0,357	0/0:3,0:2:5.93:0,6,144
chr10	100878239	.	C	CTCTT	1231.78	PASS	AB=0.950;AC=20;AF=0.385;AN=52;BaseQRankSum=8.636;DP=566;FS=1.089;HRun=0;HaplotypeScore=169.1585;InbreedingCoeff=0.3310;MQ=44.36;MQ0=27;MQRankSum=-9.485;QD=5.24;ReadPosRankSum=-0.724;VQSLOD=2.7840;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:5:26,5,0	0/0:9,0:9:14.76:0,15,130	./.	./.	0/0:22,0:22:48.08:0,48,636	0/0:18,0:18:39.09:0,39,556	0/0:26,0:26:39.84:0,40,430	0/0:37,0:9:6:0,6,54	0/0:18,0:18:39.05:0,39,575	0/0:22,0:22:42.09:0,42,573	0/0:23,0:23:53.35:0,53,750	1/1:16,0:17:20.59:183,21,0	0/0:30,0:30:75.12:0,75,1011	0/0:28,0:27:66.13:0,66,914	0/1:15,0:14:7.95:8,0,102	0/1:23,0:22:74.21:197,0,74	0/0:23,0:23:14.48:0,14,648	0/0:27,0:27:51.97:0,52,801	0/1:14,2:8:43.75:153,0,44	0/1:30,0:29:57.59:58,0,228	1/1:9,0:8:5.54:38,6,0	1/1:31,0:30:3.41:164,3,0	1/1:23,0:21:0.55:113,1,0	1/1:7,0:6:5.47:37,5,0	0/0:22,0:22:45.08:0,45,591	0/1:21,2:22:99:225,0,123	0/1:26,1:27:99:178,0,236	1/1:3,0:2:2.90:20,3,0
chr10	100878273	.	CCT	C	191.09	PASS	AB=0.899;AC=6;AF=0.111;AN=54;BaseQRankSum=5.101;DP=621;FS=0.000;HRun=0;HaplotypeScore=167.4811;InbreedingCoeff=-0.1331;MQ=46.17;MQ0=11;MQRankSum=-6.102;QD=1.72;ReadPosRankSum=1.976;VQSLOD=2.6230;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:18.33:0,18,255	0/0:11,0:11:5.37:0,5,447	0/0:10,0:4:12.01:0,12,174	./.	0/0:30,0:30:90.09:0,90,1527	0/0:17,0:17:51.17:0,51,973	0/0:23,0:22:62.78:0,63,1016	0/0:32,1:14:39.12:0,39,644	0/0:19,0:19:57.19:0,57,1094	0/0:24,0:24:72.24:0,72,1327	0/0:29,0:29:84.29:0,84,1579	0/0:29,0:29:81.16:0,81,1248	0/0:37,0:37:99:0,108,1993	0/0:32,0:32:96.32:0,96,1771	0/1:25,1:24:12.54:13,0,488	0/1:17,1:18:32.57:33,0,506	0/0:21,0:21:63.21:0,63,1188	0/0:26,0:26:75.25:0,75,1304	0/0:16,0:11:27.07:0,27,367	0/1:24,1:25:71.10:71,0,659	0/0:12,0:10:7.39:0,7,121	0/0:35,2:35:53.55:0,54,1623	0/1:18,8:24:99:115,0,779	0/1:8,4:11:68.43:68,0,234	0/0:32,0:32:96.29:0,96,1639	0/0:25,0:23:59.49:0,59,824	0/0:22,0:22:31.51:0,32,696	0/1:2,0:2:13.28:13,0,30
chr10	100878275	.	TTC	T	218.62	PASS	AB=0.973;AC=11;AF=0.204;AN=54;BaseQRankSum=6.147;DP=625;FS=4.680;HRun=0;HaplotypeScore=167.7526;InbreedingCoeff=-0.0652;MQ=46.07;MQ0=11;MQRankSum=-6.196;QD=1.29;ReadPosRankSum=1.242;VQSLOD=2.6619;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:13:44.44:44,0,182	0/1:12,0:12:2.22:2,0,431	0/0:10,0:4:12.04:0,12,193	./.	0/0:29,1:30:46.07:0,46,1251	0/0:17,0:17:42.10:0,42,637	0/0:22,0:21:48.13:0,48,749	0/0:36,0:17:42.14:0,42,634	0/0:19,0:19:54.17:0,54,866	0/0:24,0:24:66.23:0,66,1068	0/0:29,0:29:78.27:0,78,1267	0/0:28,0:28:69.20:0,69,1006	0/0:39,0:39:99:0,108,1722	0/0:32,0:32:90.31:0,90,1442	0/1:21,5:24:99:142,0,444	0/1:18,0:17:54.29:54,0,382	0/0:22,0:22:57.18:0,57,886	0/0:26,0:26:57.73:0,58,924	0/0:15,0:10:21.16:0,21,262	0/1:23,1:24:23.09:23,0,544	0/1:11,0:9:15.07:15,0,83	0/0:38,0:36:77.03:0,77,1424	0/1:26,0:24:22.10:22,0,745	0/1:13,0:12:8.67:9,0,204	0/0:31,0:31:84.29:0,84,1351	0/0:24,1:23:13.93:0,14,675	0/1:21,1:22:6.07:6,0,615	1/1:1,1:2:3.01:38,3,0
chr10	100878277	.	C	CCT	499.90	PASS	AB=0.919;AC=8;AF=0.148;AN=54;BaseQRankSum=7.146;DP=612;FS=3.261;HRun=0;HaplotypeScore=162.3237;InbreedingCoeff=0.0154;MQ=46.26;MQ0=10;MQRankSum=-7.271;QD=4.24;ReadPosRankSum=-1.391;VQSLOD=3.0271;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:6.39:0,6,216	0/0:12,0:12:28.01:0,28,460	0/0:10,0:4:12.04:0,12,190	./.	0/0:31,0:31:89.79:0,90,1376	0/0:17,0:17:51.17:0,51,819	0/0:22,0:21:57.19:0,57,899	0/0:35,0:17:51.11:0,51,726	0/0:19,0:19:57.19:0,57,918	0/0:23,0:23:66.23:0,66,1060	0/0:29,0:29:84.27:0,84,1325	0/0:25,0:25:46.11:0,46,787	0/0:39,0:39:99:0,117,1809	0/0:32,0:32:93.32:0,93,1495	0/1:25,1:24:99:144,0,438	0/1:16,1:14:99:117,0,395	0/0:21,0:21:62.42:0,62,964	0/0:25,0:26:37.59:0,38,1044	0/1:13,2:10:82.37:82,0,245	0/0:22,0:22:19.84:0,20,629	0/1:9,1:8:51.43:51,0,79	0/0:35,1:35:60.29:0,60,1061	0/0:27,0:25:14.35:0,14,575	0/0:12,0:11:8.64:0,9,209	0/0:30,0:30:90.31:0,90,1421	0/1:23,3:23:97.94:98,0,703	0/1:21,2:22:99:121,0,655	1/1:1,0:1:2.92:17,3,0
chr10	100878315	.	CCT	C	2402.95	PASS	AB=0.733;AC=5;AF=0.093;AN=54;BaseQRankSum=8.754;DP=569;FS=14.448;HRun=0;HaplotypeScore=130.4506;InbreedingCoeff=-0.1416;MQ=46.91;MQ0=17;MQRankSum=-7.928;QD=20.54;ReadPosRankSum=1.550;VQSLOD=3.5277;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:25.14:0,25,228	0/0:8,0:8:21.07:0,21,405	0/0:3,0:1:3.01:0,3,44	./.	0/0:32,0:29:84.29:0,84,1668	0/0:22,0:22:57.07:0,57,1162	0/0:23,0:20:60.20:0,60,1098	0/0:17,0:10:27.09:0,27,435	0/0:20,0:17:48.15:0,48,873	0/0:36,0:35:99:0,102,2027	0/0:31,0:31:87.24:0,87,1619	0/1:8,16:24:71.37:733,0,71	0/0:34,0:33:96.33:0,96,1894	0/0:32,0:30:90.24:0,90,1750	0/0:16,0:13:36.12:0,36,610	0/1:13,1:11:9.59:10,0,295	0/0:27,0:27:78.27:0,78,1430	0/0:22,0:22:63.05:0,63,1121	0/0:6,0:3:3.01:0,3,59	0/0:19,3:22:33.31:0,33,550	0/0:3,0:2:3.01:0,3,61	0/1:20,20:36:84.05:934,0,84	0/1:10,14:24:57:684,0,57	0/1:12,3:13:99:154,0,124	0/0:32,0:32:96.33:0,96,1891	0/0:22,2:20:0.14:0,0,691	0/0:17,1:14:10.14:0,10,237	0/0:2,0:2:5.90:0,6,42
chr10	100878319	.	CCT	C	1947.43	PASS	AB=0.922;AC=12;AF=0.222;AN=54;BaseQRankSum=12.419;DP=572;FS=16.138;HRun=0;HaplotypeScore=133.0237;InbreedingCoeff=0.4397;MQ=47.02;MQ0=19;MQRankSum=-10.681;QD=12.17;ReadPosRankSum=1.404;VQSLOD=2.3059;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:19.63:0,20,186	0/0:8,0:8:21.07:0,21,394	0/0:2,0:1:3.01:0,3,44	./.	0/0:34,0:31:90.31:0,90,1751	0/0:21,0:21:54.06:0,54,1118	0/0:26,0:23:69.16:0,69,1193	0/0:15,0:9:24.08:0,24,377	0/0:19,0:16:44.52:0,45,811	0/0:36,0:35:99:0,102,1988	0/0:31,0:31:87.23:0,87,1592	1/1:20,4:24:32.48:447,32,0	0/0:34,0:33:96.33:0,96,1897	0/0:34,0:32:96.25:0,96,1800	0/1:16,0:13:82.49:82,0,395	0/1:16,1:13:18.30:18,0,277	0/0:24,0:24:66.23:0,66,1267	0/0:24,0:24:58.13:0,58,1127	0/0:7,0:3:3.01:0,3,47	0/0:18,4:21:7.05:0,7,295	0/0:4,0:3:3.01:0,3,61	1/1:34,6:36:59.07:774,59,0	1/1:20,4:24:44.55:614,45,0	0/1:11,3:12:22.85:160,0,23	0/0:35,0:35:99:0,105,2020	0/1:21,2:19:3.28:3,0,621	0/0:18,1:15:12.71:0,13,257	1/1:2,0:2:0.60:4,1,0
chr10	100878387	.	CCT	C	48.52	PASS	AB=0.954;AC=7;AF=0.125;AN=56;BaseQRankSum=6.276;DP=630;FS=1.895;HRun=0;HaplotypeScore=120.3038;InbreedingCoeff=0.4743;MQ=51.78;MQ0=22;MQRankSum=-6.166;QD=0.87;ReadPosRankSum=0.875;VQSLOD=1.9469;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:8:5.66:16,0,6	1/1:5,0:5:6.07:16,6,0	0/0:15,0:5:12.51:0,13,146	0/0:19,0:7:6.49:0,6,74	0/0:17,0:16:48.15:0,48,814	0/0:22,0:22:63.21:0,63,1085	0/0:25,0:24:72.18:0,72,1087	0/0:33,0:24:47.09:0,47,776	0/0:24,0:21:57.04:0,57,860	0/0:32,0:32:92.12:0,92,1682	0/0:19,0:19:45.14:0,45,790	0/0:24,0:23:66.08:0,66,1044	0/0:28,0:28:81.25:0,81,1396	0/0:32,0:31:93.31:0,93,1597	1/1:16,0:14:16.68:63,17,0	0/0:36,0:30:70.81:0,71,1104	0/0:25,0:25:72.16:0,72,1147	0/1:14,1:15:60.53:61,0,404	0/1:11,1:9:24.46:24,0,250	0/0:28,3:29:59.12:0,59,698	0/0:15,0:14:39.12:0,39,571	0/0:35,0:30:80.19:0,80,1226	0/0:24,0:24:62.88:0,63,713	0/0:30,0:29:55.29:0,55,1194	0/0:25,0:25:72.24:0,72,1306	0/0:20,0:17:50.70:0,51,682	0/0:36,2:33:35.20:0,35,1119	0/0:4,0:3:9.03:0,9,176
chr10	100878403	.	C	CTCTTTCTT	1968.55	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=4.050;DP=634;FS=1.485;HRun=0;HaplotypeScore=178.4340;InbreedingCoeff=0.7589;MQ=56.38;MQ0=12;MQRankSum=-6.405;QD=37.14;ReadPosRankSum=0.869;VQSLOD=3.2535;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,10:14:3.01:125,3,0	1/1:5,0:5:15.05:434,15,0	0/0:20,0:8:19.18:0,19,262	0/0:23,0:9:21.88:0,22,240	0/0:19,0:19:45.13:0,45,879	0/0:26,0:26:65.75:0,66,1384	0/0:23,0:22:54.16:0,54,1217	0/0:36,0:31:69.16:0,69,1392	0/0:21,0:20:54.17:0,54,1274	0/0:22,0:22:48.16:0,48,1147	0/0:18,0:18:39.12:0,39,891	0/0:26,0:25:42.32:0,42,1440	0/0:30,0:30:69.18:0,69,1527	0/0:33,0:33:81.24:0,81,1987	1/1:20,0:19:57.18:1529,57,0	0/0:33,0:29:49.42:0,49,1239	0/0:23,0:23:16.79:0,17,994	0/1:13,0:14:17.58:18,0,425	0/0:15,0:12:24.08:0,24,528	0/0:26,0:24:33.10:0,33,731	0/0:15,0:14:39.13:0,39,940	0/0:32,0:31:59.88:0,60,1301	0/0:21,0:21:35.95:0,36,834	0/0:36,0:36:70.41:0,70,1806	0/0:22,0:22:42.12:0,42,985	0/0:21,0:19:45.15:0,45,1055	0/0:34,0:32:55.96:0,56,1390	0/0:6,0:5:15.05:0,15,330
chr10	100878612	.	A	AG	15580.82	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-8.529;DP=710;FS=10.063;HRun=1;HaplotypeScore=69.1962;InbreedingCoeff=0.9999;MQ=64.12;MQ0=0;MQRankSum=-4.360;QD=39.65;ReadPosRankSum=3.265;VQSLOD=5.1306;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,51:51:99:1978,132,0	1/1:0,12:12:36.12:539,36,0	0/0:18,0:16:45.13:0,45,569	0/0:23,0:23:58.43:0,58,735	0/0:27,0:27:81.24:0,81,1022	0/0:37,0:37:99:0,111,1425	0/0:22,0:22:66.20:0,66,842	1/1:1,33:34:99:1460,99,0	0/0:26,0:26:75.24:0,75,973	0/0:34,0:34:96.30:0,96,1223	0/0:25,0:25:72.17:0,72,899	1/1:0,23:23:57.19:854,57,0	0/0:26,0:26:75.21:0,75,942	0/0:21,0:21:57.17:0,57,725	1/1:2,27:29:78.26:1168,78,0	1/1:1,38:39:72.42:1579,72,0	0/0:19,0:19:57.17:0,57,725	0/0:12,0:12:30.10:0,30,389	1/1:1,11:12:33.11:495,33,0	1/1:1,32:32:84.28:1229,84,0	1/1:0,25:25:72.24:1079,72,0	1/1:0,26:26:69.23:1031,69,0	1/1:0,24:24:66.22:981,66,0	1/1:0,20:20:45.15:674,45,0	0/0:27,0:27:78.24:0,78,998	1/1:0,21:21:60.20:897,60,0	1/1:1,30:30:72.08:1077,72,0	1/1:0,12:12:36.12:539,36,0
chr10	100883134	.	C	CTT	3443.78	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-10.578;DP=607;FS=0.450;HRun=8;HaplotypeScore=70.2824;InbreedingCoeff=0.9636;MQ=73.85;MQ0=1;MQRankSum=1.325;QD=36.25;ReadPosRankSum=1.127;VQSLOD=3.5297;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:40.40:0,40,636	1/1:0,3:3:6.02:95,6,0	0/0:14,0:14:33.03:0,33,324	0/0:9,0:8:11.77:0,12,128	0/0:37,0:37:99:0,105,1160	0/0:22,0:22:60.15:0,60,669	0/0:15,0:15:42.11:0,42,468	0/0:44,0:45:99:0,106,1193	0/0:24,1:25:12.49:0,12,588	0/0:25,0:25:66.17:0,66,729	0/0:21,0:21:57.15:0,57,635	1/1:2,20:22:57.19:905,57,0	0/0:17,0:17:48.07:0,48,507	0/0:19,0:19:51.09:0,51,546	1/1:2,16:18:42.14:667,42,0	0/0:31,0:30:93.24:0,93,1027	0/0:18,0:18:48.04:0,48,509	0/0:7,0:7:21.06:0,21,233	0/0:28,0:28:72.18:0,72,795	0/0:37,0:37:99:0,108,1184	0/0:11,0:11:27.07:0,27,301	1/1:2,19:21:51.04:722,51,0	1/1:2,14:17:39.55:570,40,0	1/1:2,10:13:32.60:485,33,0	0/0:33,0:33:84.20:0,84,926	0/0:34,0:34:84.19:0,84,929	0/0:32,0:32:93.21:0,93,1017	0/0:9,0:9:18.05:0,18,201
chr10	100883470	.	A	ACGAT	1509.96	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.814;DP=599;FS=6.062;HRun=0;HaplotypeScore=141.5874;InbreedingCoeff=0.9686;MQ=80.17;MQ0=0;MQRankSum=-8.305;QD=45.76;ReadPosRankSum=-0.272;VQSLOD=4.1883;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.15:0,54,1005	1/1:2,5:7:21.06:372,21,0	0/0:15,0:15:39.12:0,39,706	0/0:21,0:21:51.08:0,51,882	0/0:27,0:27:78.24:0,78,1475	0/0:28,0:28:84.27:0,84,1632	0/0:25,0:25:69.20:0,69,1304	0/0:34,0:34:99:0,102,1899	0/0:20,0:20:60.21:0,60,1198	0/0:30,0:30:90.30:0,90,1766	0/0:19,0:19:50.89:0,51,937	0/0:26,0:26:75.23:0,75,1427	0/0:23,0:23:66.23:0,66,1266	0/0:22,0:22:63.17:0,63,1139	1/1:7,19:26:68.51:1258,69,0	0/0:18,0:18:54.16:0,54,1001	0/0:22,0:22:66.23:0,66,1318	0/0:3,0:3:9.03:0,9,180	0/0:15,0:15:39.13:0,39,778	0/0:25,0:25:72.22:0,72,1356	0/0:25,0:25:72.20:0,72,1321	0/0:17,0:17:45.13:0,45,817	0/0:18,0:18:51.17:0,51,1007	0/0:26,0:26:78.27:0,78,1532	0/0:14,0:14:42.14:0,42,815	0/0:25,0:25:72.25:0,72,1438	0/0:29,0:29:81.26:0,81,1540	0/0:19,0:19:57.20:0,57,1138
chr10	100883475	.	G	GTT	1312.49	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.714;DP=592;FS=8.068;HRun=1;HaplotypeScore=118.5631;InbreedingCoeff=0.9665;MQ=80.30;MQ0=0;MQRankSum=-8.583;QD=35.47;ReadPosRankSum=-1.131;VQSLOD=3.0141;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.16:0,54,797	1/1:1,5:6:18.03:234,18,0	0/0:14,0:14:39.11:0,39,538	0/0:22,0:22:47.89:0,48,723	0/0:24,0:24:72.23:0,72,1081	0/0:28,0:28:84.25:0,84,1239	0/0:25,0:25:75.21:0,75,1083	0/0:36,0:36:99:0,108,1525	0/0:20,0:20:60.19:0,60,896	0/0:29,0:29:87.30:0,87,1332	0/0:17,0:17:44.95:0,45,687	0/0:24,0:24:72.23:0,72,1080	0/0:23,0:23:63.18:0,63,919	0/0:21,0:21:63.18:0,63,913	1/1:12,19:31:87.16:1198,87,0	0/0:18,0:18:51.14:0,51,738	0/0:22,0:22:66.22:0,66,1010	0/0:3,0:3:9.03:0,9,138	0/0:18,0:18:51.14:0,51,720	0/0:22,0:22:66.20:0,66,968	0/0:22,0:22:63.18:0,63,919	0/0:14,0:14:42.13:0,42,622	0/0:20,0:20:51.16:0,51,757	0/0:29,0:29:81.23:0,81,1187	0/0:13,0:13:39.08:0,39,512	0/0:26,0:26:78.26:0,78,1173	0/0:25,0:25:72.21:0,72,1057	0/0:19,0:19:57.19:0,57,853
chr10	100883608	.	ATG	A	8001.34	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=13.815;DP=501;FS=5.471;HRun=0;HaplotypeScore=64.4015;InbreedingCoeff=0.9811;MQ=61.09;MQ0=3;MQRankSum=-1.096;QD=38.84;ReadPosRankSum=-2.223;VQSLOD=5.9055;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:60.20:918,60,0	1/1:0,9:9:27.09:414,27,0	0/0:9,0:7:15.03:0,15,214	0/0:8,0:5:10.23:0,10,140	0/0:26,0:26:75.26:0,75,1439	0/0:26,0:26:75.26:0,75,1448	0/0:10,0:10:30.10:0,30,580	1/1:1,23:24:69.23:1054,69,0	0/0:18,0:18:51.15:0,51,917	0/0:26,0:26:78.27:0,78,1500	0/0:27,0:27:81.26:0,81,1531	0/0:13,0:13:39.13:0,39,753	0/0:15,0:15:45.11:0,45,830	0/0:13,0:13:39.13:0,39,742	1/1:1,20:21:51.17:780,51,0	1/1:0,14:14:27.09:414,27,0	0/0:29,0:29:84.26:0,84,1574	0/0:4,0:3:9.03:0,9,170	1/1:1,15:15:39.13:594,39,0	1/1:1,29:30:81.24:1216,81,0	1/1:3,5:8:18.06:274,18,0	0/0:9,0:9:24.07:0,24,431	0/0:19,0:19:54.18:0,54,1030	0/0:12,0:12:33.11:0,33,624	0/0:31,0:31:93.32:0,93,1797	1/1:1,20:21:60.20:914,60,0	1/1:0,23:22:54.18:827,54,0	1/1:0,16:16:39.13:597,39,0
chr10	100884075	.	AAC	A	161.27	PASS	AB=0.975;AC=9;AF=0.161;AN=56;BaseQRankSum=5.443;DP=1371;FS=7.202;HRun=0;HaplotypeScore=242.4987;InbreedingCoeff=0.1794;MQ=48.36;MQ0=13;MQRankSum=-1.427;QD=0.54;ReadPosRankSum=-0.275;VQSLOD=1.0955;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:62:45.71:0,46,802	1/1:13,1:14:1.40:20,1,0	0/0:31,0:18:28.65:0,29,404	0/0:25,0:16:17.27:0,17,242	0/0:61,2:59:5.89:0,6,1072	0/0:34,3:37:0.17:0,0,960	0/1:32,1:31:18.05:18,0,666	0/0:38,0:37:60.16:0,60,916	0/1:60,1:57:14.17:14,0,585	0/0:78,1:62:41.14:0,41,1163	0/1:51,3:49:6.25:6,0,1348	0/0:67,0:61:26.58:0,27,467	0/1:74,2:62:11.39:11,0,1361	0/0:61,1:58:51.06:0,51,1255	1/1:45,3:39:17.34:215,17,0	0/0:56,0:51:5.36:0,5,699	0/0:41,0:39:55.49:0,55,911	0/0:35,0:31:5.09:0,5,391	0/0:24,0:22:34.67:0,35,522	0/0:41,0:41:51.17:0,51,816	0/0:63,0:50:21.07:0,21,337	0/0:56,0:48:36.12:0,36,574	0/0:62,0:52:21.97:0,22,829	0/0:91,0:80:33.07:0,33,501	0/0:31,2:31:2.88:0,3,992	0/0:63,0:47:54.74:0,55,936	0/0:31,1:29:15.96:0,16,585	0/1:15,0:14:9.41:9,0,264
chr10	100884093	.	C	CGT	89.62	PASS	AB=0.949;AC=4;AF=0.071;AN=56;BaseQRankSum=4.573;DP=1896;FS=1.069;HRun=0;HaplotypeScore=330.8854;InbreedingCoeff=0.4638;MQ=36.57;MQ0=61;MQRankSum=-1.961;QD=0.75;ReadPosRankSum=-0.246;VQSLOD=1.8475;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:105,0:96:57.12:0,57,833	0/1:26,1:23:11.57:12,0,21	0/0:21,0:10:30.10:0,30,456	0/0:16,0:7:18.06:0,18,283	0/0:72,0:65:81.14:0,81,1239	0/0:49,0:45:77.06:0,77,1171	0/0:60,0:49:78.05:0,78,1090	0/0:49,0:29:65.45:0,65,950	0/0:80,0:70:56.97:0,57,794	0/0:120,0:87:99:0,184,2292	0/0:60,0:53:99:0,114,1721	0/0:119,0:101:33.39:0,33,473	0/0:103,0:78:99:0,113,1769	0/0:87,0:72:96.25:0,96,1500	1/1:76,3:57:6.57:168,7,0	0/0:85,0:71:44.58:0,45,780	0/0:60,0:55:77.29:0,77,1177	0/0:54,0:48:75.56:0,76,1022	0/0:31,0:22:41.66:0,42,625	0/0:49,1:43:57.18:0,57,845	0/0:115,0:81:21.07:0,21,332	0/0:73,0:62:36.12:0,36,546	0/0:85,0:67:20.97:0,21,794	0/0:124,0:107:32.35:0,32,482	0/0:41,0:37:92.91:0,93,1389	0/0:78,1:55:73.24:0,73,1175	0/0:37,0:35:47.55:0,48,714	0/1:13,1:11:0.67:1,0,288
chr10	100884097	.	T	TAC	5516.72	PASS	AB=0.917;AC=26;AF=0.481;AN=54;BaseQRankSum=4.898;DP=1973;FS=3.872;HRun=0;HaplotypeScore=323.4498;InbreedingCoeff=0.5798;MQ=35.19;MQ0=80;MQRankSum=-3.171;QD=4.85;ReadPosRankSum=-1.764;VQSLOD=3.0278;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:112,0:101:30.47:0,30,377	1/1:23,3:22:6.80:59,7,0	0/0:18,0:7:2.98:0,3,35	./.	0/0:69,0:62:72.10:0,72,864	0/0:53,1:45:65.45:0,65,808	0/0:62,0:50:64.68:0,65,754	0/1:45,9:28:19.03:532,0,19	0/0:82,0:72:27.28:0,27,547	0/1:126,0:88:99:140,0,1083	0/0:61,0:53:99:0,108,1307	1/1:118,10:107:24.05:373,24,0	0/0:108,0:84:99:0,103,1301	0/0:92,0:76:84.25:0,84,1033	1/1:86,1:60:0.26:225,0,0	1/1:79,6:72:4.59:452,5,0	0/0:62,0:56:32.39:0,32,698	0/0:55,0:49:7.20:0,7,547	0/1:29,5:20:50.59:294,0,51	1/1:42,7:41:20.15:747,20,0	1/1:118,2:81:8.98:148,9,0	1/1:44,27:61:30.10:495,30,0	1/1:70,17:68:39.39:610,39,0	1/1:114,13:110:29.87:493,30,0	0/0:40,0:37:71.84:0,72,834	0/1:74,5:54:99:408,0,128	1/1:35,5:38:11.01:366,11,0	1/1:13,4:13:12.93:173,13,0
chr10	100884099	.	C	CAT	2083.77	PASS	AB=0.995;AC=18;AF=0.321;AN=56;BaseQRankSum=11.567;DP=2044;FS=8.115;HRun=0;HaplotypeScore=341.5211;InbreedingCoeff=0.0234;MQ=34.11;MQ0=95;MQRankSum=-2.248;QD=1.75;ReadPosRankSum=3.425;VQSLOD=0.5630;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:114,0:100:48.07:0,48,576	1/1:26,0:22:8.12:42,8,0	0/0:17,0:7:20.91:0,21,208	0/0:13,0:4:11.95:0,12,103	0/0:64,3:60:75.20:0,75,1095	0/0:55,0:45:74.81:0,75,1070	0/0:70,0:50:75.43:0,75,1024	0/1:61,0:27:99:197,0,198	0/0:84,1:72:51.83:0,52,764	0/1:132,1:90:1.45:1,0,1567	0/0:61,0:54:99:0,120,1731	1/1:132,0:108:10.89:175,11,0	0/0:113,0:86:99:0,128,1813	0/0:94,1:78:99:0,105,1460	0/1:89,1:61:21.77:99,0,22	0/1:88,1:72:99:165,0,124	0/0:65,0:57:59.90:0,60,965	0/0:58,0:51:67.09:0,67,946	0/1:37,0:22:99:122,0,125	0/1:50,0:41:31.90:328,0,32	0/1:132,2:86:51.45:51,0,65	1/1:76,0:61:9.03:229,9,0	0/1:85,0:66:24.46:253,0,24	0/1:130,2:114:6.11:214,0,6	0/0:42,0:37:84.15:0,84,1158	0/1:86,0:58:99:132,0,389	0/1:41,0:36:52.90:183,0,53	0/1:17,0:13:56.35:61,0,56
chr10	100884101	.	C	CAT	2340.33	PASS	AB=0.991;AC=21;AF=0.375;AN=56;BaseQRankSum=11.861;DP=2104;FS=9.500;HRun=0;HaplotypeScore=344.2663;InbreedingCoeff=0.1614;MQ=33.69;MQ0=112;MQRankSum=-2.423;QD=1.81;ReadPosRankSum=1.987;VQSLOD=0.7234;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:112,3:100:27.09:0,27,516	1/1:26,0:22:8.29:67,8,0	0/0:16,0:6:11.90:0,12,106	0/0:13,0:4:8.91:0,9,63	0/0:65,3:61:78.20:0,78,1124	0/0:56,1:47:71.92:0,72,1049	0/0:69,0:48:73.48:0,73,1007	0/1:66,0:26:99:178,0,231	0/0:85,2:73:21.69:0,22,770	0/1:134,5:93:17.57:18,0,1526	0/0:61,1:53:99:0,120,1737	1/1:129,7:112:8.45:171,8,0	0/0:111,3:87:99:0,109,1753	0/0:98,0:80:99:0,108,1467	1/1:90,2:63:14.23:119,14,0	0/1:90,2:74:99:200,0,122	0/0:67,0:59:58.03:0,58,986	0/1:58,1:52:3.22:3,0,743	0/1:41,0:24:99:160,0,127	0/1:52,0:43:13.05:348,0,13	0/1:139,1:89:51.46:54,0,51	1/1:76,0:61:29.99:254,30,0	0/1:86,0:67:6.66:254,0,7	1/1:124,3:110:13.68:231,14,0	0/0:44,0:39:81.17:0,81,1124	0/1:91,0:58:99:211,0,334	0/1:42,0:37:99:134,0,115	0/1:22,0:18:29.95:122,0,30
chr10	100884103	.	C	CAT	2375.04	PASS	AB=0.981;AC=21;AF=0.375;AN=56;BaseQRankSum=11.784;DP=2164;FS=4.923;HRun=0;HaplotypeScore=351.6036;InbreedingCoeff=0.1297;MQ=33.20;MQ0=140;MQRankSum=-2.493;QD=1.77;ReadPosRankSum=2.290;VQSLOD=1.1358;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:116,5:102:42.19:0,42,533	1/1:29,0:23:2.38:18,2,0	0/0:12,0:4:11.90:0,12,125	0/0:11,0:3:5.93:0,6,56	0/0:67,1:61:81.21:0,81,1150	0/0:56,0:46:75.04:0,75,1066	0/0:71,1:47:67.76:0,68,977	0/1:82,0:28:99:175,0,229	0/0:86,2:75:55:0,55,805	0/1:138,3:96:99:121,0,1502	0/0:61,0:52:99:0,120,1736	1/1:125,9:114:15.72:193,16,0	0/0:105,6:89:99:0,109,1746	0/0:100,2:84:99:0,111,1479	1/1:89,0:62:14.65:120,15,0	0/1:93,1:77:98.92:167,0,99	0/0:64,0:59:30.44:0,30,975	0/1:59,1:53:22.05:22,0,765	0/1:43,0:23:99:132,0,147	0/1:50,0:42:16.37:328,0,16	0/1:142,4:93:53.91:54,0,54	1/1:77,2:63:29.99:253,30,0	0/1:81,3:65:5.40:256,0,5	1/1:117,7:113:29.86:250,30,0	0/0:46,1:40:81.18:0,81,1134	0/1:92,2:59:99:233,0,292	0/1:45,0:39:78.42:141,0,78	0/1:21,0:18:70.07:94,0,70
chr10	100884105	.	C	CAT	2211.01	PASS	AB=0.991;AC=21;AF=0.375;AN=56;BaseQRankSum=10.914;DP=2230;FS=6.495;HRun=0;HaplotypeScore=346.6512;InbreedingCoeff=0.2749;MQ=32.72;MQ0=169;MQRankSum=-1.155;QD=1.65;ReadPosRankSum=3.371;VQSLOD=1.2115;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:120,2:102:35.98:0,36,500	1/1:31,0:24:4.39:21,4,0	0/0:11,0:3:8.84:0,9,78	0/0:8,0:1:2.92:0,3,17	0/0:63,2:59:78.20:0,78,1119	0/0:60,0:49:78.02:0,78,1090	0/0:74,0:45:65.73:0,66,954	0/1:101,0:29:99:171,0,250	0/0:79,4:73:47.84:0,48,782	0/1:142,1:97:48.87:49,0,1564	0/0:60,0:51:99:0,117,1706	1/1:140,1:115:23:189,23,0	0/0:120,1:91:99:0,106,1729	0/0:107,0:88:99:0,114,1499	1/1:94,0:64:16.46:125,16,0	0/1:97,2:76:70:171,0,70	0/0:63,1:57:32.13:0,32,955	0/0:60,2:53:50.05:0,50,894	0/1:44,1:23:99:132,0,176	0/1:53,0:45:6.23:328,0,6	0/1:150,1:94:48.01:54,0,48	1/1:82,1:66:29.99:253,30,0	1/1:84,2:67:15.57:273,16,0	1/1:130,3:114:29.90:250,30,0	0/0:48,0:41:90.16:0,90,1204	0/1:100,1:62:99:178,0,324	0/1:47,0:40:28.01:149,0,28	0/1:22,0:18:58.10:58,0,84
chr10	100884107	.	C	CAT	2257.31	PASS	AB=0.994;AC=21;AF=0.375;AN=56;BaseQRankSum=10.676;DP=2261;FS=4.225;HRun=0;HaplotypeScore=348.4996;InbreedingCoeff=0.2546;MQ=32.31;MQ0=190;MQRankSum=-2.060;QD=1.66;ReadPosRankSum=2.028;VQSLOD=1.2809;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:120,1:101:35.64:0,36,487	1/1:31,1:24:6.68:26,7,0	0/0:9,0:3:5.93:0,6,61	0/0:8,0:1:0:0,0,0	0/0:65,1:59:78.20:0,78,1129	0/0:58,1:49:77.28:0,77,1093	0/0:71,0:44:67.72:0,68,953	0/1:110,0:30:99:246,0,158	0/0:90,0:73:55.75:0,56,795	0/1:145,3:97:67.53:68,0,1557	0/0:59,0:51:99:0,114,1685	1/1:143,0:116:8.76:172,9,0	0/0:123,0:90:97.07:0,97,1687	0/0:109,0:90:99:0,108,1440	1/1:96,0:67:10.51:114,11,0	0/1:96,0:73:58.38:173,0,58	0/0:64,1:58:60.01:0,60,965	0/0:62,0:51:39.09:0,39,945	0/1:45,0:23:99:110,0,190	0/1:52,0:44:26.76:328,0,27	0/1:153,0:96:53.15:53,0,64	1/1:85,3:69:29.99:253,30,0	1/1:83,2:67:18.65:283,19,0	1/1:132,3:116:29.88:248,30,0	0/0:49,0:41:87.10:0,87,1174	0/1:106,0:64:99:141,0,384	0/1:44,0:38:26.17:172,0,26	0/1:22,0:18:57.46:57,0,86
chr10	100884111	.	T	TAC	231.79	PASS	AB=0.998;AC=15;AF=0.288;AN=52;BaseQRankSum=10.161;DP=2350;FS=27.404;HRun=0;HaplotypeScore=380.1970;InbreedingCoeff=0.2136;MQ=31.67;MQ0=230;MQRankSum=-5.755;QD=0.21;ReadPosRankSum=0.719;VQSLOD=1.1429;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:118,3:100:32.33:0,32,354	0/0:32,1:25:6.03:0,6,19	./.	./.	0/0:68,3:63:75.19:0,75,945	0/0:59,2:50:62.53:0,63,990	0/0:80,1:48:41.07:0,41,647	0/1:123,0:29:27.80:28,0,135	0/0:94,1:74:43.69:0,44,719	0/1:162,1:104:99:102,0,1305	0/0:59,0:50:96.28:0,96,1246	0/1:146,0:117:25.28:40,0,25	0/0:120,2:90:83.19:0,83,1354	0/0:113,1:93:99:0,102,1270	1/1:96,1:67:0.67:2,1,0	0/0:95,0:70:5.75:0,6,52	0/0:66,1:60:49.61:0,50,918	0/0:61,2:53:37.35:0,37,882	0/1:48,0:24:4.86:5,0,241	0/1:54,0:46:15.79:16,0,97	0/0:164,3:101:13.18:0,13,169	1/1:90,1:71:8.89:24,9,0	1/1:78,1:63:7.05:18,7,0	1/1:138,1:119:9:60,9,0	0/0:49,0:41:78.69:0,79,1015	0/1:109,1:65:52.08:52,0,451	0/1:49,0:39:38.57:39,0,65	0/0:23,0:19:6.79:0,7,123
chr10	100884119	.	TAC	T	1488.07	PASS	AB=0.881;AC=11;AF=0.212;AN=52;BaseQRankSum=10.235;DP=2542;FS=3.942;HRun=0;HaplotypeScore=388.3463;InbreedingCoeff=-0.0919;MQ=30.45;MQ0=296;MQRankSum=-6.357;QD=1.55;ReadPosRankSum=1.830;VQSLOD=0.9186;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:111,11:101:15.68:0,16,333	1/1:33,0:25:5.79:33,6,0	./.	./.	0/0:72,0:60:67.68:0,68,1122	0/0:63,1:53:82.14:0,82,1343	0/0:96,2:50:48.08:0,48,779	0/1:153,9:26:99:236,0,272	0/0:102,0:80:31.89:0,32,926	0/0:174,2:113:56.21:0,56,2322	0/0:53,0:47:93.22:0,93,1506	0/1:145,6:120:1.48:1,0,217	0/0:126,1:97:79.14:0,79,1795	0/0:122,1:99:99:0,106,1709	0/0:101,0:66:5.97:0,6,85	0/1:86,11:71:62.44:160,0,62	0/0:67,0:59:39.73:0,40,1175	0/0:69,0:55:3.65:0,4,1150	0/1:55,4:26:99:157,0,360	0/1:44,12:47:99:487,0,188	0/1:181,16:113:58.18:58,0,234	0/0:82,7:73:5.24:0,5,393	0/0:72,6:59:23.36:0,23,434	0/0:136,12:124:35.90:0,36,465	0/0:54,0:42:79.79:0,80,1292	0/1:107,12:69:99:244,0,693	0/1:36,12:37:99:170,0,175	0/1:17,8:19:80.85:81,0,256
chr10	100884127	.	CAT	C	355.64	PASS	AB=0.995;AC=12;AF=0.231;AN=52;BaseQRankSum=12.742;DP=2700;FS=8.525;HRun=0;HaplotypeScore=392.8015;InbreedingCoeff=-0.1004;MQ=29.68;MQ0=345;MQRankSum=-5.959;QD=0.28;ReadPosRankSum=1.371;VQSLOD=0.9913;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:132,0:105:13.78:0,14,256	1/1:32,0:25:6.61:28,7,0	./.	./.	0/0:66,0:52:76.21:0,76,1276	0/0:65,0:53:72.24:0,72,1457	0/0:103,1:53:60.54:0,61,903	0/1:220,0:30:58.69:59,0,545	0/0:105,0:81:49.93:0,50,999	0/1:192,6:116:26.78:27,0,2741	0/0:49,0:44:92.52:0,93,1585	0/1:167,0:130:2.04:2,0,283	0/0:140,0:99:81.15:0,81,1876	0/0:128,0:100:99:0,110,1833	0/0:101,1:63:5.36:0,5,49	0/1:101,0:71:63.91:64,0,87	0/0:68,1:61:35.25:0,35,1299	0/0:69,0:56:19.55:0,20,1379	0/1:61,0:29:35.58:36,0,507	0/1:62,0:51:99:145,0,300	0/1:208,2:115:5.73:6,0,277	0/0:97,0:70:30.02:0,30,501	0/0:87,0:68:29.38:0,29,491	0/0:154,1:128:37.69:0,38,524	0/0:60,1:43:74.19:0,74,1363	0/1:127,1:73:59.64:60,0,957	0/1:54,0:39:52.99:53,0,227	0/1:30,0:23:20.04:20,0,301
chr10	100884149	.	TAC	T	274.01	PASS	AB=0.951;AC=13;AF=0.250;AN=52;BaseQRankSum=4.461;DP=2995;DS;FS=3.784;HRun=0;HaplotypeScore=405.6488;InbreedingCoeff=-0.0048;MQ=28.96;MQ0=417;MQRankSum=-3.992;QD=0.19;ReadPosRankSum=-5.081;VQSLOD=0.2966;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:121,6:99:2.95:39,3,0	0/1:35,3:29:9.31:9,0,43	./.	./.	0/0:61,0:45:61.62:0,62,1013	0/0:57,4:48:63.10:0,63,971	0/0:114,2:56:55.69:0,56,896	0/1:238,3:31:50.85:51,0,667	0/0:109,1:83:62.76:0,63,1001	0/0:220,5:128:99:0,173,2745	0/0:56,1:50:51.08:0,51,796	0/1:184,5:150:34.18:34,0,312	0/0:148,8:105:99:0,122,1724	0/0:133,7:109:99:0,107,1702	1/1:122,5:82:6.02:77,6,0	0/1:103,3:73:7.46:7,0,310	0/0:74,2:66:84.32:0,84,1450	0/0:84,1:66:67.42:0,67,1449	0/1:53,1:30:62.68:63,0,623	0/1:71,7:65:17.89:18,0,942	0/1:227,9:136:11.55:12,0,232	0/0:85,12:65:1.19:0,1,244	0/0:86,8:72:27.95:0,28,299	0/0:158,4:138:8.76:0,9,273	0/0:56,3:40:71.84:0,72,1152	0/1:165,6:99:99:103,0,1430	0/0:55,0:41:20.19:0,20,405	0/1:39,1:28:4.69:5,0,218
chr10	100884151	.	C	CAT	74.76	PASS	AB=0.957;AC=4;AF=0.077;AN=52;BaseQRankSum=5.551;DP=3024;DS;FS=8.410;HRun=0;HaplotypeScore=419.5058;InbreedingCoeff=0.2964;MQ=28.97;MQ0=420;MQRankSum=-4.327;QD=0.29;ReadPosRankSum=-3.570;VQSLOD=0.5125;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:124,5:100:2.84:0,3,16	0/0:40,1:30:0.18:0,0,56	./.	./.	0/0:62,0:45:66.11:0,66,981	0/0:59,0:46:65.66:0,66,910	0/0:115,0:54:73.29:0,73,982	0/0:246,0:31:74.06:0,74,812	0/0:111,2:86:71.57:0,72,1014	0/0:225,1:128:99:0,108,2797	0/0:57,0:50:66.09:0,66,857	0/0:195,1:151:34.04:0,34,466	0/0:159,0:107:99:0,119,1651	0/0:137,1:107:99:0,115,1648	1/1:135,0:83:5.74:29,6,0	0/0:111,0:76:18.17:0,18,336	0/0:82,0:69:99:0,108,1497	0/1:85,0:66:5.53:6,0,1319	0/0:54,0:30:28.40:0,28,657	0/0:78,0:65:36.63:0,37,1096	0/0:242,0:136:15.37:0,15,340	0/0:97,1:67:37.33:0,37,356	0/0:96,1:75:39.07:0,39,323	0/0:160,3:138:33.65:0,34,431	0/0:58,2:41:72.17:0,72,1056	0/0:170,1:102:23.99:0,24,1424	0/0:59,0:41:15.52:0,16,397	0/1:38,4:30:99:137,0,270
chr10	100884267	.	TAC	T	1244.46	PASS	AB=0.931;AC=20;AF=0.385;AN=52;BaseQRankSum=4.939;DP=2247;DS;FS=3.664;HRun=0;HaplotypeScore=327.9539;InbreedingCoeff=-0.1959;MQ=30.13;MQ0=274;MQRankSum=-4.612;QD=0.81;ReadPosRankSum=-5.470;VQSLOD=1.1576;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:86,4:66:21.61:121,0,22	0/1:32,1:28:2.20:50,0,2	./.	./.	0/0:62,0:51:55.36:0,55,858	0/0:64,1:52:75.04:0,75,1102	0/0:104,3:57:56.27:0,56,850	0/1:168,4:18:90.99:118,0,91	0/0:82,1:62:71.55:0,72,1030	0/1:143,4:86:11.09:11,0,1373	0/0:33,0:26:24.05:0,24,398	0/1:123,8:103:22.44:110,0,22	0/0:110,2:80:99:0,105,1596	0/0:109,2:90:88.36:0,88,1411	0/1:95,5:69:30.16:30,0,225	0/1:97,13:87:25.14:123,0,25	0/1:65,2:55:21.99:22,0,1040	0/0:79,1:62:51.30:0,51,1128	0/1:48,4:20:36.41:36,0,270	0/1:45,10:49:26.55:76,0,27	0/1:165,12:106:41.47:41,0,209	1/1:59,4:42:5.08:70,5,0	1/1:62,6:53:1.42:23,1,0	1/1:98,2:82:3.16:10,3,0	0/0:44,0:31:32.23:0,32,872	0/1:102,14:76:99:351,0,320	0/1:27,9:24:64.56:65,0,159	0/1:20,0:17:94.44:144,0,94
chr10	100884277	.	CAT	C	389.72	PASS	AB=0.992;AC=13;AF=0.241;AN=54;BaseQRankSum=6.600;DP=1959;DS;FS=15.140;HRun=0;HaplotypeScore=275.1454;InbreedingCoeff=-0.1744;MQ=31.06;MQ0=211;MQRankSum=-4.151;QD=0.42;ReadPosRankSum=-3.904;VQSLOD=0.7801;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:78,0:58:47.70:48,0,48	0/1:27,0:24:32.33:52,0,32	./.	0/0:13,0:5:2.07:0,2,32	0/0:43,0:37:36.09:0,36,906	0/0:59,0:47:62.67:0,63,1144	0/0:91,0:56:42.92:0,43,1050	0/1:126,1:18:10.42:10,0,120	0/0:71,2:55:48.81:0,49,1015	0/1:130,2:82:18.56:19,0,1410	0/0:24,0:19:24.04:0,24,395	0/1:111,0:86:63.32:63,0,87	0/0:104,0:76:99:0,99,1753	0/0:102,1:85:97.08:0,97,1457	0/0:87,0:58:9.44:0,9,129	0/1:93,0:73:16.96:47,0,17	0/0:63,0:51:8.26:0,8,1115	0/0:70,1:53:10.71:0,11,1073	0/0:50,0:20:9.84:0,10,280	0/1:50,0:44:8.85:9,0,62	0/0:155,2:96:11.01:0,11,185	1/1:52,0:33:6.09:36,6,0	0/0:52,0:38:2.81:0,3,28	0/1:82,0:66:7.87:8,0,34	0/0:44,2:33:35.54:0,36,962	0/1:106,2:76:99:186,0,425	0/1:32,1:21:10.39:10,0,125	0/1:21,0:18:48.20:48,0,82
chr10	100884293	.	T	TAC	2729.02	PASS	AB=0.883;AC=23;AF=0.411;AN=56;BaseQRankSum=3.528;DP=1601;FS=45.465;HRun=0;HaplotypeScore=243.9548;InbreedingCoeff=0.5760;MQ=34.05;MQ0=122;MQRankSum=-5.297;QD=3.09;ReadPosRankSum=-1.716;VQSLOD=1.4383;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:65,0:48:29.98:30,0,56	0/0:18,0:17:11.16:0,11,142	0/0:14,0:7:8.01:0,8,105	0/0:24,0:14:34.45:0,34,340	0/0:39,0:33:30.01:0,30,508	0/0:43,0:39:50.92:0,51,606	0/0:68,0:48:65.77:0,66,757	1/1:105,3:38:24.55:720,25,0	0/0:56,0:44:62.11:0,62,749	0/0:112,0:79:40.39:0,40,586	0/0:21,0:18:26.96:0,27,329	1/1:75,23:80:5.48:97,5,0	0/0:82,0:66:82.85:0,83,1095	0/0:82,0:71:56.87:0,57,695	0/0:72,0:52:1.48:0,1,35	0/1:71,5:59:0.78:32,0,1	0/0:45,0:37:41.41:0,41,487	0/1:56,0:44:3.47:3,0,440	1/1:25,10:19:33.16:478,33,0	0/1:19,16:32:24.64:133,0,25	0/1:87,27:76:30.16:44,0,30	1/1:44,3:32:6.02:95,6,0	1/1:35,4:29:9.03:143,9,0	1/1:60,8:55:9.78:147,10,0	0/0:40,0:33:57.01:0,57,684	1/1:61,26:66:18.57:743,19,0	1/1:26,4:20:14.12:164,14,0	1/1:7,14:18:6.02:96,6,0
chr10	100885524	.	A	ATC	3164.44	PASS	AB=0.763;AC=18;AF=0.321;AN=56;BaseQRankSum=-1.531;DP=454;FS=0.000;HRun=0;HaplotypeScore=101.5118;InbreedingCoeff=0.2007;MQ=62.25;MQ0=17;MQRankSum=-4.475;QD=13.76;ReadPosRankSum=-0.948;VQSLOD=3.2714;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:2.96:20,3,0	0/0:8,0:7:15.03:0,15,164	0/0:18,0:10:4.97:0,5,42	0/0:22,0:11:9.64:0,10,64	0/0:15,0:18:26.78:0,27,264	0/0:22,0:22:32.73:0,33,341	0/0:14,0:14:25.88:0,26,273	0/1:31,12:43:1.95:501,0,2	1/1:7,0:8:9.02:112,9,0	0/0:16,0:16:23.56:0,24,212	0/0:15,0:16:29.92:0,30,325	0/1:8,4:12:3.63:196,0,4	0/0:13,0:13:32.90:0,33,365	0/0:14,0:14:15.04:0,15,163	0/0:12,0:12:21.06:0,21,241	0/1:8,4:12:10.59:240,0,11	0/0:25,0:25:39.56:0,40,379	0/0:9,0:9:15.04:0,15,173	0/1:13,2:17:39.13:282,0,39	0/1:17,5:23:32.28:502,0,32	1/1:4,1:5:3.01:47,3,0	0/1:1,4:6:6.83:126,0,7	0/1:7,8:13:23.20:97,0,23	0/1:6,3:8:3.93:104,0,4	0/0:14,0:13:15.04:0,15,173	1/1:18,1:19:27.08:384,27,0	0/1:24,5:28:99:596,0,109	0/1:17,1:11:21.63:127,0,22
chr10	100885556	.	CTGTGTGTGTGTGTGTGTGTG	C	4338.40	PASS	AB=0.750;AC=13;AF=0.260;AN=50;BaseQRankSum=7.295;DP=422;FS=10.222;HRun=0;HaplotypeScore=207.4849;InbreedingCoeff=0.7355;MQ=50.94;MQ0=27;MQRankSum=-5.811;QD=30.77;ReadPosRankSum=-1.116;VQSLOD=2.8631;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:9:2.52:0,3,139	0/0:6,0:6:15.05:0,15,1237	./.	./.	0/0:13,0:13:18.06:0,18,1259	0/0:18,0:18:23.71:0,24,1744	0/0:12,0:14:30.09:0,30,2077	1/1:27,0:25:8.98:96,9,0	0/0:6,0:7:15.05:0,15,1001	0/0:23,0:20:48.16:0,48,3542	0/0:14,0:14:18.06:0,18,1135	0/0:13,0:14:20.75:0,21,1587	0/0:18,0:17:30.57:0,31,1999	0/0:16,0:12:26.88:0,27,1910	0/0:9,0:16:20.29:0,20,1497	1/1:4,10:14:27.09:1236,27,0	0/0:23,0:23:48.12:0,48,3166	0/0:9,0:8:24.08:0,24,1485	1/1:14,2:15:5.37:319,5,0	1/1:14,11:24:16.58:507,17,0	./.	0/0:8,0:8:6.02:0,6,556	0/0:13,0:11:3.12:0,3,537	0/0:16,0:15:18.06:0,18,1639	0/0:16,0:16:39.13:0,39,3492	0/1:12,6:16:99:810,0,259	1/1:21,10:30:19.86:1141,20,0	1/1:8,2:7:5.85:230,6,0
chr10	100886045	.	A	ATCTG	4842.73	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=8.120;DP=885;FS=0.694;HRun=0;HaplotypeScore=192.3901;InbreedingCoeff=0.5101;MQ=68.22;MQ0=6;MQRankSum=1.723;QD=9.67;ReadPosRankSum=2.264;VQSLOD=4.2896;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:17.92:140,18,0	1/1:9,0:9:11.99:124,12,0	0/0:41,0:35:44.53:0,45,402	0/0:29,0:26:20.11:0,20,286	0/0:36,0:36:84.01:0,84,974	0/0:28,0:28:66.03:0,66,764	0/0:18,0:18:22.97:0,23,380	1/1:57,0:54:92.95:830,93,0	0/0:36,0:36:87.06:0,87,1026	0/0:39,0:37:87.11:0,87,910	0/0:19,0:19:54.03:0,54,602	1/1:14,26:41:24.08:563,24,0	0/0:37,0:37:65.93:0,66,681	0/0:46,0:46:99:0,132,1342	1/1:13,1:35:9.02:108,9,0	0/1:33,0:33:99:272,0,165	0/0:13,0:13:23.80:0,24,226	0/0:13,0:13:29.82:0,30,290	0/1:33,0:33:30.14:475,0,30	0/1:33,0:33:99:159,0,263	1/1:55,0:55:28.53:760,29,0	1/1:8,20:28:17.98:367,18,0	1/1:8,25:33:9.03:212,9,0	1/1:13,19:32:3.01:71,3,0	0/0:29,0:29:51.11:0,51,700	0/1:37,0:37:56.56:399,0,57	0/1:31,0:30:99:228,0,162	0/1:16,0:16:71.63:135,0,72
chr10	100886554	.	TTAATAATAATAA	T	2336.65	PASS	AB=0.886;AC=20;AF=0.455;AN=44;BaseQRankSum=4.908;DP=247;FS=0.837;HRun=0;HaplotypeScore=89.2202;InbreedingCoeff=0.6115;MQ=84.04;MQ0=1;MQRankSum=-3.320;QD=18.11;ReadPosRankSum=-0.154;VQSLOD=1.9622;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:5.94:6,0,60	1/1:1,0:6:9.03:251,9,0	./.	./.	0/0:6,0:7:12.04:0,12,582	0/0:16,0:16:30.09:0,30,1477	./.	1/1:23,10:33:30:398,30,0	0/0:6,0:6:6.02:0,6,351	./.	0/0:9,0:9:9.03:0,9,401	0/0:2,0:2:6.02:0,6,115	0/0:5,0:6:9.03:0,9,435	0/0:6,0:6:9.02:0,9,378	1/1:5,0:9:12.04:335,12,0	1/1:0,3:3:9.03:246,9,0	0/0:13,0:13:17.45:0,17,970	0/0:6,0:8:9.01:0,9,218	1/1:8,4:11:8.99:227,9,0	1/1:12,3:15:8.96:225,9,0	1/1:4,0:4:2.99:24,3,0	./.	0/0:4,0:4:3.01:0,3,114	./.	0/0:6,0:9:15.05:0,15,750	0/1:12,5:17:99:355,0,146	1/1:6,4:10:6.02:207,6,0	1/1:5,3:7:8.98:226,9,0
chr10	100886589	.	AATAATAATG	A	727.78	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=7.504;DP=195;FS=0.000;HRun=0;HaplotypeScore=67.4492;InbreedingCoeff=-0.1124;MQ=62.66;MQ0=1;MQRankSum=-5.725;QD=10.11;ReadPosRankSum=5.063;VQSLOD=0.4646;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,7:8:6.02:124,6,0	0/1:6,0:6:26.95:123,0,27	0/0:1,0:1:3:0,3,28	0/1:4,0:2:0.83:1,0,22	0/0:12,0:12:36.03:0,36,682	0/0:10,0:10:30.08:0,30,1139	0/0:1,0:1:3:0,3,25	0/0:31,0:31:43.66:0,44,580	0/0:3,0:3:9.02:0,9,312	0/0:4,0:4:11.97:0,12,106	0/0:4,0:4:9.02:0,9,312	0/0:6,0:6:14.04:0,14,145	0/0:6,0:6:17.98:0,18,422	0/0:2,0:2:6.02:0,6,288	0/1:8,0:8:66.91:159,0,67	0/1:7,0:7:73.46:73,0,97	0/0:18,0:18:53.82:0,54,1092	0/0:8,0:8:23.92:0,24,339	0/1:10,0:9:62.21:62,0,136	0/1:8,0:8:68.36:68,0,119	0/0:2,0:2:3:0,3,25	0/0:4,0:4:11.99:0,12,100	0/0:5,0:5:15:0,15,204	./.	0/0:6,0:6:18.06:0,18,742	0/1:9,0:9:99:105,0,172	0/1:8,0:8:74.36:74,0,81	0/1:4,0:4:31.93:77,0,32
chr10	100888962	.	G	GT	9517.20	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-14.240;DP=571;FS=0.326;HRun=7;HaplotypeScore=48.5319;InbreedingCoeff=0.9854;MQ=68.77;MQ0=0;MQRankSum=-1.146;QD=30.90;ReadPosRankSum=2.750;VQSLOD=4.9221;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,39:46:99:1320,111,0	1/1:0,4:4:12.04:145,12,0	0/0:11,0:11:21.03:0,21,203	0/0:7,0:7:14.92:0,15,129	0/0:16,0:16:42.07:0,42,405	0/0:18,0:18:48.08:0,48,463	0/0:21,0:21:45.05:0,45,429	1/1:2,33:35:99:1185,99,0	0/0:17,0:17:45.06:0,45,430	0/0:36,0:36:96.11:0,96,910	0/0:24,0:24:66.10:0,66,637	1/1:1,12:13:33.10:399,33,0	0/0:21,0:21:51.07:0,51,490	0/0:16,0:16:42.07:0,42,405	1/1:5,19:24:48.15:580,48,0	1/1:1,17:18:51.16:616,51,0	0/0:33,0:33:93.13:0,93,891	0/0:11,0:11:30.05:0,30,289	1/1:1,12:15:42.13:503,42,0	1/1:1,21:22:57.17:688,57,0	1/1:3,7:10:21.06:254,21,0	1/1:4,14:18:10.12:390,10,0	1/1:1,21:23:63.19:756,63,0	1/1:2,13:15:36.11:435,36,0	0/0:32,0:32:78.09:0,78,747	1/1:0,31:31:93.29:1123,93,0	1/1:0,27:27:72.22:870,72,0	1/1:0,7:7:21.06:254,21,0
chr10	100889167	.	T	TAC	457.96	PASS	AB=0.924;AC=14;AF=0.292;AN=48;BaseQRankSum=-1.343;DP=458;FS=2.274;HRun=0;HaplotypeScore=79.9472;InbreedingCoeff=0.2016;MQ=66.32;MQ0=15;MQRankSum=-0.399;QD=2.35;ReadPosRankSum=-0.862;VQSLOD=1.5530;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:19:12.91:0,13,59	0/0:2,0:4:6.15:0,6,28	./.	./.	0/0:8,0:9:15:0,15,139	0/0:16,0:19:14.85:0,15,133	0/0:15,0:15:11.69:0,12,93	1/1:16,0:16:0.89:2,1,0	0/0:10,0:10:9.02:0,9,96	0/1:15,0:15:32.89:33,0,40	0/0:11,0:11:8.96:0,9,69	1/1:11,7:20:6.02:89,6,0	0/0:10,0:12:11.86:0,12,110	0/0:17,0:17:27.14:0,27,226	0/0:13,0:20:8.99:0,9,42	1/1:22,0:22:11.94:126,12,0	0/0:12,0:16:11.70:0,12,92	0/0:14,0:14:13.25:0,13,121	0/1:18,0:18:27.31:45,0,27	./.	0/1:23,10:31:49.75:103,0,50	0/0:8,0:7:8.76:0,9,76	1/1:9,0:8:2.22:7,2,0	0/1:14,3:18:19.86:45,0,20	0/0:12,0:15:14.67:0,15,107	0/1:21,1:21:6.65:100,0,7	0/1:22,0:21:42.45:51,0,42	./.
chr10	100890617	.	C	CA	4832.01	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=0.080;DP=666;FS=6.099;HRun=1;HaplotypeScore=68.3563;InbreedingCoeff=0.9993;MQ=91.04;MQ0=0;MQRankSum=-1.628;QD=42.39;ReadPosRankSum=2.021;VQSLOD=5.2152;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.21:0,66,857	0/0:10,0:10:30.10:0,30,390	0/0:33,0:33:96.23:0,96,1191	0/0:20,0:20:48.20:0,48,614	0/0:31,0:31:90.29:0,90,1168	0/0:34,0:34:96.26:0,96,1211	0/0:14,0:14:42.12:0,42,530	0/0:25,0:24:69.21:0,69,871	0/0:24,0:24:69.21:0,69,881	0/0:22,0:22:66.21:0,66,854	0/0:25,0:25:72.20:0,72,905	1/1:0,29:29:84.28:1259,84,0	0/0:38,0:38:99:0,111,1441	0/0:18,0:18:54.18:0,54,701	0/0:29,0:29:87.27:0,87,1114	0/0:31,0:31:90.29:0,90,1168	0/0:20,0:20:51.17:0,51,662	0/0:9,0:9:27.09:0,27,350	0/0:25,0:25:72.19:0,72,914	0/0:29,0:29:81.26:0,81,1051	0/0:14,0:14:42.14:0,42,545	1/1:0,25:25:75.21:1099,75,0	1/1:2,34:36:96.33:1439,96,0	1/1:1,23:24:69.23:1034,69,0	0/0:22,0:22:63.19:0,63,805	0/0:25,0:25:69.22:0,69,884	0/0:21,0:21:60.18:0,60,765	0/0:9,0:9:27.09:0,27,350
chr10	100891574	.	TACACACAC	T	4245.54	PASS	AB=0.720;AC=15;AF=0.268;AN=56;BaseQRankSum=8.298;DP=571;FS=1.673;HRun=0;HaplotypeScore=154.0308;InbreedingCoeff=0.7639;MQ=64.82;MQ0=12;MQRankSum=-4.695;QD=27.21;ReadPosRankSum=-1.545;VQSLOD=4.2361;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:13.17:0,13,181	0/0:3,0:13:19.76:0,20,442	0/0:24,0:17:1.26:0,1,48	0/0:23,0:10:6:0,6,66	0/0:16,0:16:24.08:0,24,1000	0/0:22,0:23:51.10:0,51,1654	0/0:23,0:23:48.13:0,48,1656	1/1:14,11:24:22.58:430,23,0	0/0:13,0:16:30.08:0,30,1016	0/0:17,0:17:36.11:0,36,1161	0/0:20,0:23:48.16:0,48,1645	0/0:12,0:12:6.02:0,6,222	0/0:20,0:20:54.19:0,54,1891	0/0:12,0:12:23.98:0,24,689	0/0:4,0:17:15.02:0,15,352	1/1:4,15:19:36.02:820,36,0	0/0:18,0:19:36.11:0,36,1127	0/0:25,0:27:54.19:0,54,2010	0/1:11,7:17:2.45:425,0,2	1/1:7,19:25:44.98:889,45,0	1/1:19,0:18:5.96:78,6,0	0/0:15,0:14:0.70:0,1,114	0/0:23,0:23:8.35:0,8,230	0/0:24,0:24:2.27:0,2,83	0/0:28,0:28:51.14:0,51,1660	1/1:7,8:15:24.07:490,24,0	1/1:9,13:24:33.11:805,33,0	1/1:1,9:10:12.04:308,12,0
chr10	100891649	.	A	AAGGCCCACTAATTTACAGAGAATTTAAAAC	17267.82	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=6.131;DP=582;FS=0.501;HRun=0;HaplotypeScore=406.0868;InbreedingCoeff=0.8828;MQ=76.86;MQ0=0;MQRankSum=-12.605;QD=133.86;ReadPosRankSum=0.182;VQSLOD=3.6911;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:18:54.19:4710,54,0	0/0:11,0:11:18.06:0,18,1305	0/0:17,0:17:48.16:0,48,2230	0/0:18,0:18:45.15:0,45,1927	0/0:30,0:30:90.30:0,90,6041	0/0:27,0:27:69.24:0,69,4768	0/0:15,0:15:45.15:0,45,2969	0/0:29,0:29:81.24:0,81,3779	0/0:14,0:14:36.11:0,36,2013	0/0:32,0:32:93.30:0,93,5754	0/0:20,0:19:54.15:0,54,3168	1/1:13,4:20:48.16:4363,48,0	0/0:24,0:24:72.24:0,72,4998	0/0:6,0:6:18.05:0,18,1226	0/0:15,0:15:39.13:0,39,2728	0/0:20,0:20:57.16:0,57,3049	0/0:18,0:18:48.16:0,48,3242	0/0:25,0:25:63.17:0,63,4241	0/0:27,0:27:75.25:0,75,4123	0/1:33,0:33:99:172,0,5889	0/0:15,0:15:33.57:0,34,2190	1/1:6,2:17:24.08:2139,24,0	1/1:11,3:27:39.13:3561,39,0	1/1:11,1:13:30.10:2323,30,0	0/0:33,0:33:87.29:0,87,5728	0/0:23,0:23:66.23:0,66,4795	0/0:23,0:23:60.21:0,60,3787	0/0:11,0:11:30.10:0,30,1736
chr10	100892075	.	G	GCAACATGGATGGAGGAAGC	29500.75	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=5.554;DP=674;FS=13.581;HRun=0;HaplotypeScore=330.3816;InbreedingCoeff=0.9865;MQ=88.73;MQ0=0;MQRankSum=-14.455;QD=90.22;ReadPosRankSum=-0.915;VQSLOD=3.4172;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:51.07:2514,51,0	1/1:9,0:9:18.06:1449,18,0	0/0:30,0:30:56.65:0,57,1558	0/0:29,0:29:38.84:0,39,766	0/0:33,0:33:81.28:0,81,3969	0/0:14,0:14:36.11:0,36,1547	0/0:41,0:41:82.51:0,83,3251	1/1:44,0:44:69.23:3467,69,0	0/0:28,0:28:54.17:0,54,2264	0/0:33,0:33:78.26:0,78,3302	0/0:18,0:18:33.11:0,33,1687	1/1:22,0:22:27.09:2201,27,0	0/0:29,0:29:66.20:0,66,2799	0/0:23,0:23:51.13:0,51,2381	1/1:23,0:23:42.14:3266,42,0	1/1:10,0:10:15.05:1035,15,0	0/0:25,0:25:69.24:0,69,3236	0/0:18,0:18:36.10:0,36,1306	1/1:17,0:16:39.06:1472,39,0	1/1:15,0:15:30.10:1634,30,0	1/1:40,0:40:48.16:2188,48,0	1/1:23,0:23:39.13:1743,39,0	1/1:12,2:17:21.07:921,21,0	1/1:23,0:23:24.08:1683,24,0	0/0:26,0:26:57.18:0,57,2491	1/1:31,0:32:48.50:3714,49,0	1/1:12,0:12:18.06:1456,18,0	1/1:3,0:3:9.03:759,9,0
chr10	100892085	.	T	TGGAGGAAGCCAACATGGAC	33100.96	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=1.950;DP=726;FS=13.679;HRun=0;HaplotypeScore=310.1986;InbreedingCoeff=0.9877;MQ=82.27;MQ0=0;MQRankSum=-15.030;QD=83.59;ReadPosRankSum=-2.148;VQSLOD=3.1622;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:33,1:34:68.82:3357,69,0	1/1:4,3:17:17.80:1537,18,0	0/0:25,0:25:72.09:0,72,1992	0/0:26,0:26:46.98:0,47,981	0/0:33,0:33:90.22:0,90,4160	0/0:15,0:15:36.12:0,36,1598	0/0:37,0:37:97.51:0,98,3618	1/1:38,0:38:92.75:3865,93,0	0/0:28,0:28:65.15:0,65,2493	0/0:34,0:34:87.24:0,87,3501	0/0:14,0:14:39.08:0,39,1764	1/1:7,6:23:27.09:2314,27,0	0/0:24,0:24:72.22:0,72,3020	0/0:22,0:22:60.12:0,60,2538	1/1:11,7:36:42.14:3451,42,0	1/1:6,2:16:18.06:1297,18,0	0/0:29,0:29:81.21:0,81,3459	0/0:16,0:16:42.03:0,42,1455	1/1:9,2:27:65.98:1941,66,0	1/1:10,3:26:33.04:1758,33,0	1/1:41,0:41:68.58:2780,69,0	1/1:10,4:27:42.05:1842,42,0	1/1:16,0:16:27:1153,27,0	1/1:11,3:32:21.07:1437,21,0	0/0:27,0:27:66.16:0,66,2665	1/1:35,0:34:36.22:4008,36,0	1/1:4,3:20:18.06:1548,18,0	1/1:2,1:7:9.03:815,9,0
chr10	100892217	.	T	TCACACACACACA	1700.86	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=2.821;DP=515;FS=41.933;HRun=0;HaplotypeScore=180.2285;InbreedingCoeff=0.6215;MQ=43.15;MQ0=24;MQRankSum=-3.441;QD=7.30;ReadPosRankSum=-4.245;VQSLOD=-0.0957;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:10:6.96:0,7,174	0/0:9,0:9:11.20:0,11,342	0/0:4,0:3:5.96:0,6,97	0/0:12,0:6:4.40:0,4,200	0/0:21,0:20:44.90:0,45,1348	0/0:23,0:23:14.52:0,15,397	0/0:20,0:19:23.92:0,24,817	1/1:20,0:16:21.07:436,21,0	0/0:19,0:17:14.77:0,15,375	0/0:21,0:20:27.08:0,27,885	0/0:19,0:19:27.09:0,27,837	1/1:18,0:17:6.02:140,6,0	0/0:23,0:23:23.74:0,24,916	0/0:27,0:27:30.09:0,30,875	0/0:21,0:21:21.05:0,21,551	1/1:15,0:14:5.98:95,6,0	0/0:32,0:33:41.84:0,42,971	0/0:15,0:14:20.29:0,20,510	1/1:11,0:10:6.02:172,6,0	0/1:19,0:19:24.30:142,0,24	1/1:19,2:21:3.59:12,4,0	0/1:22,0:20:0:0,0,0	1/1:18,0:18:3.01:42,3,0	1/1:21,0:21:5.47:156,5,0	0/1:16,0:15:62.85:67,0,63	1/1:14,0:11:9.50:228,10,0	1/1:30,0:29:18.26:286,18,0	1/1:4,0:3:3.01:110,3,0
chr10	100892782	.	A	AT	3476.40	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.883;DP=701;FS=1.384;HRun=3;HaplotypeScore=79.7102;InbreedingCoeff=1.0000;MQ=94.38;MQ0=0;MQRankSum=-3.765;QD=35.47;ReadPosRankSum=2.538;VQSLOD=4.3264;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1332	0/0:14,0:14:42.12:0,42,493	0/0:37,0:37:96.25:0,96,1122	0/0:26,0:26:66.16:0,66,765	0/0:36,0:36:99:0,102,1223	0/0:21,0:21:60.17:0,60,709	0/0:21,0:21:57.17:0,57,684	0/0:36,0:36:99:0,99,1169	0/0:21,0:21:63.18:0,63,745	0/0:33,0:33:96.28:0,96,1133	0/0:23,0:23:69.20:0,69,816	1/1:1,20:21:60.20:838,60,0	0/0:30,0:30:87.27:0,87,1044	0/0:16,0:16:45.12:0,45,529	0/0:32,0:32:84.26:0,84,1008	0/0:22,0:22:60.18:0,60,720	0/0:19,0:19:54.14:0,54,633	0/0:25,0:25:69.21:0,69,827	0/0:18,0:18:51.15:0,51,602	0/0:36,0:36:99:0,105,1248	0/0:17,0:17:51.16:0,51,612	1/1:2,24:26:69.19:934,69,0	1/1:2,22:24:51.17:696,51,0	1/1:1,26:27:72.24:1008,72,0	0/0:15,0:15:42.13:0,42,504	0/0:21,0:21:57.17:0,57,684	0/0:34,0:33:99:0,99,1176	0/0:13,0:13:39.12:0,39,468
chr10	100893106	.	C	CTT	2132.96	PASS	AB=0.571;AC=11;AF=0.196;AN=56;BaseQRankSum=-4.942;DP=574;FS=0.940;HRun=10;HaplotypeScore=86.6176;InbreedingCoeff=0.8895;MQ=75.49;MQ0=0;MQRankSum=0.402;QD=20.31;ReadPosRankSum=1.858;VQSLOD=2.9782;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:27:56.56:0,57,612	0/1:2,0:8:15.16:28,0,15	0/0:13,0:12:24.91:0,25,237	0/0:14,0:14:29.94:0,30,273	0/0:28,0:28:72.12:0,72,725	0/0:21,0:20:48.06:0,48,488	0/0:20,0:21:50.80:0,51,493	0/0:30,0:30:71.36:0,71,667	0/0:24,0:24:40.56:0,41,553	0/0:18,0:18:51.09:0,51,511	0/0:19,0:19:45.07:0,45,457	1/1:0,15:16:35.61:501,36,0	0/0:18,0:18:45.09:0,45,457	0/0:23,0:23:57.06:0,57,579	1/1:0,0:23:54.90:193,55,0	0/0:22,0:22:59.92:0,60,579	0/0:24,0:24:63.12:0,63,641	0/0:12,0:12:33.07:0,33,333	0/0:30,0:30:71.98:0,72,714	0/0:24,0:24:63.26:0,63,608	0/0:16,0:16:45.09:0,45,457	1/1:5,14:21:36.08:506,36,0	1/1:4,18:23:42.10:584,42,0	1/1:1,11:14:35.61:500,36,0	0/0:17,0:17:36.04:0,36,366	0/0:24,0:24:68.64:0,69,651	0/0:36,0:36:96.35:0,96,952	0/0:8,0:8:23.94:0,24,230
chr10	100893977	.	AT	A	2361.77	PASS	AB=0.917;AC=13;AF=0.232;AN=56;BaseQRankSum=11.443;DP=573;FS=0.000;HRun=10;HaplotypeScore=58.8463;InbreedingCoeff=0.8993;MQ=73.09;MQ0=0;MQRankSum=-1.291;QD=17.89;ReadPosRankSum=2.705;VQSLOD=4.2389;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.14:0,60,653	1/1:3,7:10:14.99:130,15,0	0/0:21,0:18:33.01:0,33,332	0/0:10,0:9:13.68:0,14,138	0/0:27,0:29:77.87:0,78,815	0/0:17,0:17:42.10:0,42,456	0/0:11,1:12:4.02:0,4,273	0/0:30,1:31:46.12:0,46,722	0/0:23,0:23:57.15:0,57,631	0/0:15,0:15:39.09:0,39,424	0/0:24,0:24:69.18:0,69,754	1/1:1,27:28:71.98:625,72,0	0/0:13,0:14:41.93:0,42,437	0/0:25,0:25:60.11:0,60,642	1/1:2,15:17:44.98:391,45,0	0/0:19,0:19:48.06:0,48,516	0/0:21,0:21:54.13:0,54,588	0/1:10,1:11:2.02:2,0,195	0/0:22,0:22:48.13:0,48,531	0/0:27,1:28:49.14:0,49,763	0/0:20,0:22:62.82:0,63,649	1/1:3,18:21:50.94:436,51,0	1/1:1,18:19:50.99:443,51,0	1/1:4,22:26:59.98:521,60,0	0/0:10,0:11:29.91:0,30,313	0/0:34,0:34:72.19:0,72,796	0/0:32,0:33:56.21:0,56,700	0/0:7,0:7:15.04:0,15,166
chr10	100896515	.	TG	T	1026.64	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.381;DP=716;FS=3.146;HRun=5;HaplotypeScore=85.6814;InbreedingCoeff=0.9988;MQ=83.56;MQ0=0;MQRankSum=-5.095;QD=29.33;ReadPosRankSum=-0.492;VQSLOD=3.7903;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:99:1122,99,0	0/0:14,0:14:39.13:0,39,534	0/0:18,0:18:47.89:0,48,616	0/0:26,0:26:60.24:0,60,894	0/0:31,0:31:90.30:0,90,1230	0/0:26,0:26:69.23:0,69,943	0/0:37,0:37:99:0,105,1436	0/0:24,0:24:60.19:0,60,803	0/0:28,0:28:84.25:0,84,1118	0/0:31,0:31:90.30:0,90,1230	0/0:13,0:13:39.12:0,39,518	0/0:28,0:28:78.26:0,78,1066	0/0:19,0:19:57.18:0,57,764	0/0:30,0:30:78.25:0,78,1051	0/0:31,0:31:90.22:0,90,1151	0/0:26,0:26:78.25:0,78,1051	0/0:31,0:31:90.30:0,90,1230	0/0:18,0:18:54.18:0,54,739	0/0:35,0:35:96.24:0,96,1231	0/0:22,0:22:63.21:0,63,859	0/0:55,0:55:99:0,154,2088	0/0:23,0:23:66.22:0,66,903	0/0:17,0:17:51.17:0,51,698	0/0:32,0:32:84.27:0,84,1133	0/0:16,0:16:45.14:0,45,601	0/0:25,0:25:63.20:0,63,847	0/0:16,0:16:45.15:0,45,614	0/0:9,0:9:27.09:0,27,369
chr10	100900154	.	A	AAC	6264.27	PASS	AB=0.636;AC=21;AF=0.375;AN=56;BaseQRankSum=-10.622;DP=534;FS=14.066;HRun=0;HaplotypeScore=72.4978;InbreedingCoeff=0.9190;MQ=76.23;MQ0=4;MQRankSum=2.021;QD=29.41;ReadPosRankSum=-0.174;VQSLOD=5.5887;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:44.97:311,45,0	1/1:1,8:9:15.05:243,15,0	0/0:41,0:25:40.31:0,40,421	0/0:47,0:28:18.93:0,19,285	0/0:12,0:12:27.08:0,27,330	0/0:18,0:19:44.97:0,45,526	0/0:15,0:15:33.10:0,33,403	1/1:15,24:38:69.14:954,69,0	0/0:15,0:15:30.08:0,30,354	0/0:15,0:16:43.21:0,43,494	0/0:10,0:10:27.08:0,27,330	0/0:10,0:11:29.90:0,30,330	0/0:15,0:15:42.12:0,42,501	0/0:15,0:15:39.12:0,39,476	1/1:1,15:16:42.14:681,42,0	1/1:1,14:15:24.08:389,24,0	0/0:17,0:17:39.12:0,39,476	0/0:24,0:24:62.81:0,63,711	1/1:1,14:14:42.11:635,42,0	1/1:2,17:20:45.15:730,45,0	1/1:4,16:19:30.10:487,30,0	0/0:16,0:16:42.10:0,42,498	0/0:15,0:15:36.11:0,36,437	0/0:8,0:8:21.07:0,21,256	0/0:22,0:22:48.14:0,48,576	1/1:3,16:19:48.16:775,48,0	0/1:9,11:21:28.19:571,0,28	1/1:0,10:10:30.10:487,30,0
chr10	100900321	.	AAT	A	4961.95	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=12.043;DP=344;FS=7.808;HRun=0;HaplotypeScore=45.8092;InbreedingCoeff=0.9073;MQ=71.30;MQ0=0;MQRankSum=0.812;QD=30.07;ReadPosRankSum=-0.450;VQSLOD=5.4901;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:30.10:386,30,0	1/1:0,8:8:21.07:270,21,0	0/0:5,0:4:5.61:0,6,61	0/0:16,0:10:5.26:0,5,61	0/0:9,0:9:27.09:0,27,429	0/0:19,0:19:54.15:0,54,852	0/0:2,0:2:6.02:0,6,101	1/1:11,31:42:93.29:1180,93,0	0/0:6,0:6:15.02:0,15,212	0/0:19,0:19:54.18:0,54,885	0/0:10,0:10:30.08:0,30,477	0/0:10,0:10:30.08:0,30,455	0/0:9,0:9:27.09:0,27,455	0/0:11,0:11:30.10:0,30,506	1/1:1,7:8:15.05:193,15,0	1/1:2,7:9:21.07:270,21,0	0/0:17,0:17:45.15:0,45,738	0/0:19,0:19:51.17:0,51,856	1/1:3,12:15:33.11:425,33,0	1/1:1,15:16:39.08:483,39,0	1/1:0,9:9:24.08:309,24,0	0/0:3,0:3:9.03:0,9,152	0/0:4,0:4:12.04:0,12,202	0/0:1,0:1:2.99:0,3,24	0/0:18,1:19:18.57:0,19,843	1/1:3,16:19:48.14:597,48,0	1/1:0,15:15:45.15:579,45,0	1/1:0,7:7:21.07:270,21,0
chr10	100901244	.	T	TTG	4861.11	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=2.386;DP=635;FS=11.617;HRun=0;HaplotypeScore=119.6039;InbreedingCoeff=0.9425;MQ=69.63;MQ0=4;MQRankSum=-2.564;QD=18.48;ReadPosRankSum=7.453;VQSLOD=3.7940;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:40:14.15:866,14,0	1/1:12,0:12:20.64:204,21,0	0/0:29,0:13:15.51:0,16,127	0/0:21,0:17:22.36:0,22,200	0/0:31,0:30:72.39:0,72,623	0/0:29,0:28:64.99:0,65,592	0/0:16,0:16:38.31:0,38,327	1/1:31,0:30:58.66:612,59,0	0/0:14,0:14:35.96:0,36,347	0/0:28,0:28:65.38:0,65,624	0/0:32,0:31:83.59:0,84,718	0/0:27,0:27:34.54:0,35,342	0/0:27,0:27:62.62:0,63,497	0/0:13,0:13:32.07:0,32,331	1/1:23,0:23:11.82:246,12,0	1/1:20,1:21:52.93:567,53,0	0/0:20,0:20:41.43:0,41,394	0/0:17,0:17:48.87:0,49,471	1/1:20,0:19:12.36:317,12,0	1/1:35,0:35:38.57:646,39,0	1/1:14,0:14:0.16:142,0,0	0/0:15,0:14:32.45:0,32,215	0/0:19,0:19:45.95:0,46,339	0/0:13,0:12:11.91:0,12,91	0/0:21,0:21:55.52:0,56,538	1/1:12,11:24:37.47:512,37,0	1/1:34,0:33:33.94:534,34,0	1/1:9,0:9:19.48:215,19,0
chr10	100901245	.	T	TG	2832.96	PASS	AB=0.793;AC=18;AF=0.321;AN=56;BaseQRankSum=8.165;DP=626;FS=14.445;HRun=0;HaplotypeScore=92.9580;InbreedingCoeff=0.5258;MQ=68.97;MQ0=4;MQRankSum=-2.560;QD=9.77;ReadPosRankSum=8.358;VQSLOD=1.9939;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:20,19:39:4.17:545,0,4	1/1:2,10:12:12.20:151,12,0	0/1:30,0:13:6.16:6,0,130	0/0:20,0:16:14.68:0,15,164	0/0:31,0:30:83.72:0,84,664	0/0:28,0:27:71.79:0,72,647	0/0:16,0:16:38.35:0,38,332	1/1:24,7:30:23.03:439,23,0	0/0:13,0:13:35.94:0,36,331	0/0:28,0:28:74.40:0,74,699	0/0:32,0:31:80.83:0,81,709	0/0:26,0:26:47.68:0,48,405	0/0:26,0:26:69.60:0,70,552	0/0:12,0:12:32.08:0,32,319	0/1:4,17:23:6.68:165,0,7	1/1:9,12:21:17.71:307,18,0	0/0:20,0:20:43.81:0,44,422	0/0:17,0:17:49.22:0,49,454	0/1:18,1:18:17.98:206,0,18	0/1:26,8:34:20.06:397,0,20	0/1:10,4:14:1.15:86,0,1	0/0:15,0:14:36.01:0,36,263	0/0:19,0:19:49.01:0,49,345	0/0:13,0:12:9.86:0,10,63	0/0:20,0:20:55.51:0,56,526	1/1:17,6:23:9.81:311,10,0	1/1:10,25:34:0.52:272,1,0	1/1:4,5:9:7.90:129,8,0
chr10	100901259	.	T	TTA	6505.52	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=7.291;DP=590;FS=54.249;HRun=0;HaplotypeScore=92.1859;InbreedingCoeff=0.7854;MQ=75.34;MQ0=3;MQRankSum=-0.803;QD=23.15;ReadPosRankSum=-1.413;VQSLOD=2.5394;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:38:99:1246,111,0	1/1:3,0:7:19.29:214,19,0	0/0:34,0:19:29.89:0,30,246	0/0:22,0:20:18.04:0,18,135	0/0:23,0:24:16.92:0,17,364	0/0:24,0:24:8.98:0,9,375	0/0:12,0:12:0.80:0,1,134	1/1:0,22:27:78.67:707,79,0	0/0:15,0:15:35.56:0,36,305	0/0:22,0:23:33.47:0,33,487	0/0:29,0:29:35.50:0,35,475	0/0:18,0:18:11.65:0,12,190	0/0:24,0:24:10.53:0,11,322	0/0:13,0:13:12.40:0,12,251	1/1:10,1:17:41.99:476,42,0	1/1:11,8:23:65.30:714,65,0	0/0:20,0:20:24.50:0,25,316	0/0:16,0:16:40.88:0,41,326	1/1:1,2:24:66.95:576,67,0	1/1:7,6:33:75.20:685,75,0	1/1:1,4:18:15.01:180,15,0	0/1:14,0:14:16.92:17,0,125	0/1:17,0:17:10.99:11,0,200	0/0:15,0:14:17.65:0,18,119	0/0:17,0:17:6.65:0,7,332	1/1:18,6:24:67.25:588,67,0	1/1:16,13:30:75.52:868,76,0	1/1:2,4:7:18.05:223,18,0
chr10	100902862	.	A	AACACACAC	6432.96	PASS	AB=0.639;AC=28;AF=0.519;AN=54;BaseQRankSum=6.748;DP=638;FS=0.000;HRun=0;HaplotypeScore=178.7537;InbreedingCoeff=0.7890;MQ=61.50;MQ0=9;MQRankSum=-5.514;QD=18.70;ReadPosRankSum=-4.395;VQSLOD=3.0352;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:9.48:173,9,0	1/1:8,0:12:9.77:315,10,0	0/0:32,0:19:3.01:0,3,76	./.	0/0:24,0:26:30.07:0,30,665	0/0:24,0:24:45.12:0,45,989	0/0:10,0:12:18.02:0,18,375	1/1:36,0:36:32.28:563,32,0	0/0:21,0:23:54.19:0,54,1322	0/0:39,0:39:54.82:0,55,1201	0/0:17,0:18:27.08:0,27,613	1/1:11,0:21:14.72:123,15,0	0/0:10,0:12:14.82:0,15,183	0/0:13,0:14:27.09:0,27,632	1/1:16,0:19:12.51:400,13,0	1/1:19,0:27:27.09:822,27,0	0/0:10,0:30:43.56:0,44,295	0/0:17,0:17:33.02:0,33,636	1/1:14,0:14:15.94:361,16,0	1/1:21,0:29:18.06:626,18,0	1/1:30,0:27:12.24:234,12,0	0/1:6,0:25:27.87:367,0,28	0/1:13,0:21:73.85:80,0,74	1/1:9,0:26:14.19:206,14,0	0/0:23,0:24:54.17:0,54,1262	1/1:16,1:25:42.13:1238,42,0	1/1:19,0:23:14.57:321,15,0	1/1:7,0:10:21.02:604,21,0
chr10	100904536	.	C	CTTCTTATGGGG	3830.63	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.053;DP=686;FS=1.590;HRun=0;HaplotypeScore=217.1234;InbreedingCoeff=0.9971;MQ=70.43;MQ0=0;MQRankSum=-8.583;QD=106.41;ReadPosRankSum=-1.060;VQSLOD=3.5876;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:51:99:0,135,4284	1/1:6,4:10:21.07:982,21,0	0/0:31,0:30:60.19:0,60,1635	0/0:25,0:25:42.11:0,42,1091	0/0:32,0:32:84.27:0,84,2726	0/0:28,0:28:69.22:0,69,2174	0/0:20,0:20:42.14:0,42,1321	0/0:25,0:25:63.18:0,63,1676	0/0:32,0:32:84.29:0,84,2749	0/0:24,0:24:60.21:0,60,1948	0/0:15,0:15:36.12:0,36,1168	0/0:19,0:19:51.16:0,51,1621	0/0:28,0:28:63.22:0,63,2102	0/0:27,0:27:66.23:0,66,2110	1/1:13,12:26:57.20:2849,57,0	0/0:26,0:26:66.23:0,66,2152	0/0:37,0:37:99:0,105,3437	0/0:26,0:26:69.20:0,69,2141	0/0:14,0:13:27.09:0,27,820	0/0:25,0:25:66.21:0,66,2038	0/0:34,0:34:81.28:0,81,2596	0/0:21,0:21:57.20:0,57,1900	0/0:19,0:19:51.16:0,51,1592	0/0:19,0:19:42.14:0,42,1367	0/0:14,0:14:42.14:0,42,1339	0/0:15,0:15:39.12:0,39,1155	0/0:26,0:25:63.22:0,63,2034	0/0:16,0:16:33.11:0,33,1097
chr10	100905405	.	CA	C	1212.79	PASS	AB=0.900;AC=11;AF=0.196;AN=56;BaseQRankSum=8.775;DP=519;FS=0.985;HRun=11;HaplotypeScore=54.8194;InbreedingCoeff=0.8535;MQ=71.03;MQ0=0;MQRankSum=0.553;QD=14.79;ReadPosRankSum=0.722;VQSLOD=3.9135;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,11:15:33.42:272,33,0	0/1:8,1:9:6.60:7,0,142	0/0:14,0:14:13.36:0,13,211	0/0:7,1:8:12.70:0,13,62	0/0:21,0:21:35.63:0,36,576	0/0:27,0:28:78.03:0,78,814	0/0:12,0:12:36.09:0,36,384	0/0:31,1:35:34.59:0,35,747	0/0:14,0:15:41.94:0,42,430	0/0:25,2:27:25.90:0,26,687	0/0:29,2:31:37.91:0,38,802	1/1:2,14:16:9.97:288,10,0	0/0:15,0:15:39.09:0,39,410	0/0:16,1:18:17.28:0,17,366	0/0:17,2:19:4.86:0,5,463	0/0:18,0:18:51.13:0,51,544	0/0:19,0:19:45.10:0,45,471	0/0:21,0:21:51.08:0,51,524	0/0:26,0:26:69.14:0,69,716	0/0:26,0:26:72.18:0,72,768	0/0:12,0:12:30.07:0,30,314	1/1:4,15:19:44.92:369,45,0	1/1:2,13:16:37.99:301,38,0	1/1:1,6:7:17.98:148,18,0	0/0:18,1:19:29.56:0,30,519	0/0:23,0:23:45.11:0,45,474	0/0:19,1:21:32.34:0,32,524	0/0:9,0:9:21.03:0,21,215
chr10	100906226	.	T	TAGAGAGAGAGAGAGAGA	5092.90	PASS	AB=0.762;AC=18;AF=0.321;AN=56;BaseQRankSum=9.553;DP=627;FS=11.787;HRun=0;HaplotypeScore=268.5836;InbreedingCoeff=-0.3511;MQ=67.53;MQ0=7;MQRankSum=-10.381;QD=15.11;ReadPosRankSum=-1.134;VQSLOD=2.0099;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:20:29.60:178,0,30	0/1:6,0:10:99:372,0,107	0/0:45,0:20:32.10:0,32,503	0/0:54,0:25:18.78:0,19,399	0/0:18,0:23:66.22:0,66,1899	0/0:23,0:25:69.21:0,69,1749	0/0:9,0:12:33.11:0,33,1210	0/1:27,0:26:99:455,0,444	0/0:14,0:15:41.80:0,42,1487	0/0:25,0:25:72.23:0,72,2377	0/0:26,0:28:75.24:0,75,2584	0/1:9,0:21:60.14:344,0,60	0/0:25,0:28:84.27:0,84,3251	0/0:14,0:14:42.14:0,42,1554	0/1:10,1:19:99:571,0,139	0/1:4,0:26:87.63:275,0,88	0/1:20,0:20:59.47:59,0,1790	0/1:17,0:19:35.99:36,0,1445	0/1:11,0:20:99:553,0,230	0/1:13,0:22:99:178,0,216	1/1:8,0:8:3.01:59,3,0	0/1:8,0:21:98.16:139,0,98	0/1:8,0:19:60.63:312,0,61	0/1:16,0:16:53.37:91,0,53	0/0:16,0:18:45.15:0,45,1382	0/1:13,0:27:99:902,0,116	0/1:14,0:25:99:434,0,200	0/1:6,0:12:99:134,0,121
chr10	100906785	.	T	TA	1105.35	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.953;DP=518;FS=0.602;HRun=9;HaplotypeScore=47.3007;InbreedingCoeff=0.8859;MQ=72.77;MQ0=0;MQRankSum=0.197;QD=25.71;ReadPosRankSum=-0.313;VQSLOD=3.9624;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:12:30.08:332,30,0	1/1:1,11:12:36.06:384,36,0	0/0:13,0:13:18.12:0,18,176	0/0:4,0:4:8.69:0,9,64	0/0:31,0:31:83.94:0,84,721	0/0:19,0:19:50.98:0,51,443	0/0:13,0:13:38.99:0,39,339	0/0:44,0:44:99:0,102,880	0/0:15,0:15:11.48:0,11,258	0/0:22,0:22:56.98:0,57,495	0/0:23,0:23:62.98:0,63,547	0/0:12,1:13:2.81:0,3,253	0/0:17,0:17:38.95:0,39,331	0/0:18,0:18:44.12:0,44,389	1/1:0,19:19:48.13:531,48,0	0/0:23,0:23:65.99:0,66,573	0/0:29,0:29:74.96:0,75,651	0/0:16,0:16:35.97:0,36,312	0/0:11,0:11:26.99:0,27,234	0/0:27,0:27:80.97:0,81,699	0/0:9,0:9:26.98:0,27,230	0/0:10,0:10:20.98:0,21,182	0/0:17,0:17:47.99:0,48,417	0/0:3,0:3:9:0,9,78	0/0:34,0:34:95.95:0,96,829	0/0:26,0:26:71.98:0,72,625	0/0:24,0:24:56.97:0,57,495	0/0:14,0:14:35.97:0,36,312
chr10	100907480	.	C	CTT	4712.67	PASS	AB=0.581;AC=21;AF=0.375;AN=56;BaseQRankSum=-1.936;DP=642;FS=0.714;HRun=10;HaplotypeScore=88.8812;InbreedingCoeff=0.9294;MQ=77.65;MQ0=0;MQRankSum=0.317;QD=19.72;ReadPosRankSum=-0.456;VQSLOD=3.8884;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,1:22:45.17:173,45,0	1/1:0,5:10:22.54:250,23,0	0/0:23,0:25:35.58:0,36,306	0/0:20,0:18:25.16:0,25,178	0/0:20,0:20:26.93:0,27,443	0/0:35,0:35:81.06:0,81,806	0/0:16,0:16:32.97:0,33,311	1/1:14,17:33:25.17:631,25,0	0/0:20,0:21:59.83:0,60,572	0/0:22,0:22:57.08:0,57,572	0/0:25,0:25:75.10:0,75,749	0/0:22,0:22:50.66:0,51,497	0/0:31,0:31:84.14:0,84,854	0/0:22,0:22:48.01:0,48,487	1/1:5,1:37:67.42:269,67,0	1/1:1,15:17:30.10:448,30,0	0/0:26,0:27:53.77:0,54,601	0/0:17,0:17:35.44:0,35,391	1/1:5,19:26:62.56:773,63,0	1/1:2,17:20:50.25:601,50,0	1/1:0,10:11:17.55:233,18,0	0/0:19,0:20:50.77:0,51,478	0/0:31,0:32:86.88:0,87,850	0/0:20,0:20:57.05:0,57,554	0/0:27,0:28:65.85:0,66,721	0/1:7,15:25:5.59:486,0,6	1/1:4,27:32:48.16:715,48,0	1/1:2,4:6:9.03:134,9,0
chr10	100908802	.	TTGTG	T	342.48	PASS	AB=1.000;AC=12;AF=0.231;AN=52;BaseQRankSum=0.791;DP=539;FS=11.424;HRun=0;HaplotypeScore=107.7611;InbreedingCoeff=0.3757;MQ=59.16;MQ0=29;MQRankSum=-0.051;QD=2.74;ReadPosRankSum=2.251;VQSLOD=1.1081;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:19:16.04:0,16,73	0/0:6,0:8:6.02:0,6,101	./.	./.	0/0:15,0:16:30.06:0,30,574	0/0:27,0:26:32.91:0,33,605	0/0:12,0:11:14.96:0,15,254	0/0:38,0:38:2.19:0,2,45	0/1:16,0:16:5.75:6,0,482	0/0:25,0:24:27.80:0,28,755	0/0:13,0:13:21.06:0,21,385	1/1:10,4:14:1.67:45,2,0	0/0:17,0:16:28.25:0,28,388	0/0:14,0:14:13.64:0,14,338	0/0:15,0:14:9.03:0,9,151	0/0:21,0:22:22.13:0,22,250	0/0:20,0:19:32.50:0,32,562	0/0:18,0:17:27.85:0,28,511	0/1:34,0:32:37:37,0,138	0/0:19,0:19:20.27:0,20,231	0/0:24,0:22:4.73:0,5,112	1/1:9,7:15:9.50:142,9,0	1/1:14,0:14:2.99:24,3,0	1/1:8,9:17:12.04:188,12,0	0/0:25,0:25:48.57:0,49,908	0/1:10,0:10:25.18:25,0,137	0/0:35,0:32:37.06:0,37,397	0/1:4,0:4:21.40:21,0,80
chr10	100908840	.	G	GTA	1978.27	PASS	AB=0.896;AC=14;AF=0.250;AN=56;BaseQRankSum=9.534;DP=505;FS=4.162;HRun=0;HaplotypeScore=91.3791;InbreedingCoeff=0.6045;MQ=66.05;MQ0=10;MQRankSum=-1.445;QD=12.06;ReadPosRankSum=-0.393;VQSLOD=2.7794;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:34.96:0,35,294	0/1:6,0:6:9.80:10,0,61	0/0:28,0:20:52.99:0,53,508	0/0:15,0:10:20.23:0,20,255	0/0:20,0:20:10.75:0,11,476	0/0:25,0:24:53.80:0,54,546	0/0:9,0:8:20.96:0,21,221	1/1:27,0:26:63.35:533,63,0	0/0:13,0:13:39.04:0,39,468	0/0:25,0:24:62.76:0,63,684	0/0:17,0:17:0.74:0,1,262	0/0:13,0:13:21.43:0,21,172	0/0:26,0:26:53.94:0,54,514	0/0:14,0:14:11.64:0,12,329	0/0:11,0:10:24.81:0,25,202	0/1:17,0:17:15.63:100,0,16	0/0:19,0:19:29.84:0,30,422	0/0:19,0:18:50.80:0,51,522	1/1:15,2:17:4.43:308,4,0	1/1:4,12:18:20.57:353,21,0	1/1:14,0:14:16.05:184,16,0	0/0:13,0:11:20.95:0,21,168	0/0:10,0:10:20.27:0,20,158	0/0:16,0:16:23.93:0,24,189	0/0:26,0:26:45.66:0,46,705	0/1:14,0:14:12.62:198,0,13	0/1:11,26:38:0.09:287,0,0	1/1:12,0:12:15.48:182,15,0
chr10	100916054	.	TA	T	1818.79	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.552;DP=538;FS=2.936;HRun=7;HaplotypeScore=79.7098;InbreedingCoeff=0.9699;MQ=60.39;MQ0=2;MQRankSum=0.599;QD=21.15;ReadPosRankSum=1.026;VQSLOD=3.3795;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,20:26:57.12:581,57,0	0/0:10,0:10:30.10:0,30,377	0/0:9,0:6:14.68:0,15,133	0/0:8,0:3:6.02:0,6,70	0/0:30,0:30:90.28:0,90,1120	0/0:21,0:21:60.16:0,60,737	0/0:16,0:15:36.12:0,36,453	0/0:39,0:37:99:0,99,1223	0/0:10,0:10:24.06:0,24,289	0/0:31,0:31:90.28:0,90,1115	0/0:32,0:31:84.25:0,84,1032	1/1:0,13:13:36.08:367,36,0	0/0:17,0:17:42.12:0,42,515	0/0:24,0:24:60.19:0,60,755	0/0:15,0:15:45.14:0,45,566	0/0:16,0:16:42.13:0,42,529	0/0:20,0:20:48.66:0,49,605	0/0:24,0:23:57.14:0,57,699	0/0:18,0:17:48.14:0,48,580	0/0:28,0:28:69.22:0,69,867	0/0:9,0:9:21.07:0,21,264	1/1:4,11:15:39.08:397,39,0	1/1:5,12:17:42.08:425,42,0	1/1:2,13:15:23.64:224,24,0	0/0:21,0:21:57.17:0,57,704	0/0:24,0:25:72.10:0,72,883	0/0:18,0:18:48.14:0,48,590	0/0:10,0:10:30.10:0,30,377
chr10	100916477	.	TA	T	3673.80	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.075;DP=526;FS=6.569;HRun=9;HaplotypeScore=53.8594;InbreedingCoeff=0.9905;MQ=76.27;MQ0=0;MQRankSum=0.481;QD=23.11;ReadPosRankSum=-1.756;VQSLOD=3.7874;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.21:0,75,855	0/0:5,0:5:15.04:0,15,165	0/0:14,0:13:15.24:0,15,254	0/0:18,0:14:18.06:0,18,152	0/0:28,1:29:81.24:0,81,933	0/0:19,0:19:54.16:0,54,623	0/0:16,0:16:42.11:0,42,475	1/1:3,24:27:72.04:659,72,0	0/0:17,0:17:48.14:0,48,554	0/0:21,0:21:54.16:0,54,618	0/0:25,0:26:72.02:0,72,792	0/0:14,0:14:39.11:0,39,442	0/0:17,0:17:45.10:0,45,498	0/0:12,0:12:33.07:0,33,368	0/0:22,0:22:63.19:0,63,727	1/1:4,15:19:42.02:384,42,0	0/0:18,0:18:42.12:0,42,485	0/0:19,0:19:57.17:0,57,658	1/1:2,15:17:41.99:379,42,0	1/1:2,18:20:50.91:449,51,0	1/1:1,5:6:15.01:137,15,0	0/0:15,0:16:36.10:0,36,407	0/0:27,0:27:78.19:0,78,879	0/0:9,0:9:27.08:0,27,312	0/0:21,0:21:57.16:0,57,648	1/1:2,31:33:61.32:787,61,0	1/1:2,15:17:39.02:357,39,0	1/1:1,19:20:57.03:522,57,0
chr10	100917317	.	GA	G	4394.88	PASS	AB=0.538;AC=15;AF=0.268;AN=56;BaseQRankSum=8.734;DP=513;FS=23.886;HRun=3;HaplotypeScore=67.5764;InbreedingCoeff=0.9049;MQ=104.21;MQ0=0;MQRankSum=-3.184;QD=32.80;ReadPosRankSum=2.031;VQSLOD=3.0057;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.21:0,63,900	0/0:5,0:5:15.03:0,15,195	0/0:37,0:37:80.70:0,81,908	0/0:38,0:36:79.70:0,80,938	0/0:19,0:19:54.18:0,54,772	0/0:27,0:27:78.26:0,78,1115	0/0:11,0:11:33.11:0,33,471	1/1:0,21:21:60.18:731,60,0	0/0:8,0:8:21.07:0,21,300	0/0:19,0:19:57.18:0,57,801	0/0:16,0:16:45.10:0,45,602	0/0:15,0:15:45.13:0,45,596	0/0:19,0:19:57.18:0,57,796	0/0:11,0:11:33.11:0,33,472	0/0:13,0:13:39.12:0,39,540	1/1:0,18:18:51.16:631,51,0	0/0:30,0:30:84.28:0,84,1198	0/0:25,0:25:74.51:0,75,972	1/1:0,19:19:57.15:680,57,0	1/1:1,19:20:60.17:729,60,0	1/1:2,10:12:24.08:297,24,0	0/0:19,0:19:57.19:0,57,816	0/0:13,0:13:39.13:0,39,556	0/0:16,0:16:42.06:0,42,553	0/0:15,0:15:45.15:0,45,644	0/1:2,12:14:22.82:400,0,23	1/1:1,22:23:54.17:668,54,0	1/1:0,7:7:21.07:260,21,0
chr10	100917402	.	CAAATAAAT	C	5078.52	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=9.069;DP=330;FS=7.317;HRun=0;HaplotypeScore=86.4136;InbreedingCoeff=0.8568;MQ=61.68;MQ0=0;MQRankSum=-7.215;QD=45.34;ReadPosRankSum=-3.512;VQSLOD=2.9768;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.15:0,45,1551	0/0:8,0:8:21.07:0,21,803	0/0:6,0:4:3.01:0,3,42	0/0:9,0:8:5.93:0,6,84	0/0:17,0:17:39.60:0,40,1468	0/0:18,0:18:48.16:0,48,1818	0/0:6,0:6:12.04:0,12,341	1/1:7,22:30:66.07:1046,66,0	0/0:6,0:6:12.04:0,12,514	0/0:11,0:11:30.09:0,30,894	0/0:14,0:14:30.10:0,30,984	0/0:10,0:10:21.04:0,21,556	0/0:16,0:16:30.09:0,30,993	0/0:5,0:5:15.05:0,15,568	0/0:6,0:6:12.04:0,12,428	1/1:6,5:11:24:548,24,0	0/0:30,0:30:81.28:0,81,3011	0/0:21,0:21:60.19:0,60,2033	1/1:10,1:11:18.06:292,18,0	1/1:7,6:13:36:732,36,0	1/1:6,1:7:11.97:161,12,0	0/0:3,0:3:3.01:0,3,80	0/0:4,0:4:6.02:0,6,209	0/0:3,0:3:3.01:0,3,129	0/0:8,0:8:21.07:0,21,900	1/1:6,4:10:27.08:513,27,0	1/1:8,15:23:54.18:1397,54,0	1/1:4,3:7:21.03:389,21,0
chr10	100917410	.	TA	T	832.23	PASS	AB=0.880;AC=9;AF=0.161;AN=56;BaseQRankSum=10.441;DP=314;FS=0.000;HRun=3;HaplotypeScore=50.4461;InbreedingCoeff=-0.2209;MQ=60.25;MQ0=0;MQRankSum=-8.868;QD=7.30;ReadPosRankSum=2.084;VQSLOD=0.5842;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.18:0,54,768	0/0:7,0:7:21.07:0,21,302	0/1:4,0:3:18.81:19,0,37	0/0:7,0:6:6.01:0,6,72	0/0:17,0:17:48.16:0,48,683	0/0:17,0:17:51.17:0,51,730	0/0:4,0:4:12.04:0,12,173	0/1:25,0:25:99:198,0,282	0/0:4,0:4:12.04:0,12,173	0/0:11,0:11:33.10:0,33,454	0/0:13,0:13:39.13:0,39,546	0/0:9,0:9:24.05:0,24,304	0/0:11,0:11:30.09:0,30,414	0/0:5,0:5:15.05:0,15,216	0/0:6,0:6:18.06:0,18,256	0/1:9,1:10:96.36:112,0,96	0/0:30,0:30:87.29:0,87,1250	0/0:25,0:25:71.05:0,71,989	0/1:8,3:11:70.09:166,0,70	0/1:14,2:16:93.41:93,0,196	0/1:3,3:6:30.66:62,0,31	0/0:1,0:1:3.01:0,3,43	0/0:3,0:3:9.03:0,9,130	0/0:1,0:1:3.01:0,3,43	0/0:10,0:10:30.10:0,30,426	0/1:8,2:10:95.67:119,0,96	0/1:23,1:24:99:130,0,100	0/1:6,1:7:64.89:72,0,65
chr10	100917533	.	AT	A	5125.52	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.586;DP=488;FS=8.476;HRun=4;HaplotypeScore=80.6375;InbreedingCoeff=0.9983;MQ=84.66;MQ0=0;MQRankSum=-4.341;QD=31.84;ReadPosRankSum=-1.128;VQSLOD=4.5650;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.16:0,51,691	0/0:6,0:6:18.05:0,18,237	0/0:19,0:19:51.15:0,51,672	0/0:16,0:16:40.60:0,41,486	0/0:19,0:19:57.16:0,57,763	0/0:21,0:21:63.21:0,63,882	0/0:9,0:9:27.07:0,27,360	1/1:4,24:28:69.18:801,69,0	0/0:12,0:12:36.10:0,36,473	0/0:23,0:23:63.20:0,63,867	0/0:13,0:13:39.13:0,39,546	0/0:14,0:14:42.14:0,42,587	0/0:15,0:15:45.13:0,45,588	0/0:15,0:15:45.15:0,45,617	0/0:15,0:15:45.12:0,45,596	1/1:1,20:21:60.12:701,60,0	0/0:20,0:20:54.18:0,54,754	0/0:19,0:19:48.11:0,48,648	1/1:1,20:21:57.11:638,57,0	1/1:3,25:28:66.13:773,66,0	1/1:1,10:11:30.09:360,30,0	0/0:14,0:14:42.13:0,42,571	0/0:15,0:15:45.14:0,45,614	0/0:20,0:20:54.15:0,54,720	0/0:25,0:25:72.22:0,72,974	1/1:0,21:21:63.18:743,63,0	1/1:0,15:15:45.14:536,45,0	1/1:0,16:16:48.15:575,48,0
chr10	100918667	.	TC	T	437.96	PASS	AB=0.774;AC=3;AF=0.058;AN=52;BaseQRankSum=3.324;DP=914;FS=0.000;HRun=1;HaplotypeScore=63.5815;InbreedingCoeff=-0.0712;MQ=27.85;MQ0=322;MQRankSum=-4.085;QD=3.84;ReadPosRankSum=1.375;VQSLOD=0.1664;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:35,2:15:17.79:18,0,256	0/0:18,0:15:36.12:0,36,512	./.	./.	0/0:43,0:26:48.15:0,48,654	0/0:33,0:23:45.13:0,45,630	0/0:33,0:14:30.31:0,30,389	0/0:14,0:5:15.05:0,15,213	0/0:22,0:16:27.09:0,27,385	0/0:34,0:19:48.16:0,48,682	0/0:18,0:14:33.07:0,33,447	0/0:34,12:24:15.42:0,15,667	0/0:29,0:19:26.89:0,27,363	0/0:35,0:22:36.57:0,37,487	0/0:39,0:25:27.09:0,27,373	0/0:11,0:6:9.03:0,9,128	0/0:58,0:30:54.16:0,54,763	0/0:46,0:35:56.90:0,57,677	0/0:16,0:3:9.03:0,9,130	0/0:24,0:10:12.04:0,12,176	0/0:46,0:13:23.96:0,24,281	0/1:24,17:30:99:216,0,627	0/1:18,18:19:99:302,0,260	0/0:44,3:25:26.98:0,27,254	0/0:34,0:26:78.26:0,78,1125	0/0:48,0:18:20.90:0,21,218	0/0:37,0:20:36.11:0,36,513	0/0:55,0:17:9.03:0,9,127
chr10	100918695	.	TTC	T	337.48	PASS	AB=0.936;AC=10;AF=0.217;AN=46;BaseQRankSum=4.804;DP=789;FS=26.099;HRun=0;HaplotypeScore=75.3686;InbreedingCoeff=-0.0394;MQ=28.63;MQ0=256;MQRankSum=-4.636;QD=0.97;ReadPosRankSum=-1.588;VQSLOD=-0.5419;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,6:14:77.26:77,0,199	0/0:16,0:13:29.31:0,29,384	./.	./.	0/1:39,4:30:26.93:27,0,310	0/0:32,0:25:46.87:0,47,691	0/0:38,0:23:44.05:0,44,612	./.	0/0:19,0:17:14.40:0,14,159	0/0:33,0:22:47.37:0,47,683	0/0:18,0:16:21.29:0,21,435	0/1:31,4:19:99:105,0,113	0/0:33,0:22:8.69:0,9,116	0/0:31,0:19:17.97:0,18,232	0/1:39,2:27:53.50:53,0,212	0/0:3,1:1:0.47:0,0,1	0/1:49,1:28:4.45:4,0,631	0/1:35,2:29:41.37:41,0,475	./.	./.	0/1:34,1:8:8.74:9,0,77	0/0:29,0:20:10.18:0,10,231	0/1:27,1:14:13.76:14,0,164	1/1:38,4:19:13.55:138,14,0	0/0:36,0:30:82.16:0,82,1241	0/0:39,0:14:9.03:0,9,157	0/0:22,0:9:3.01:0,3,39	0/0:50,0:15:3.01:0,3,38
chr10	100918697	.	CTCTTCT	C	161.02	PASS	AB=1.000;AC=5;AF=0.109;AN=46;BaseQRankSum=1.639;DP=775;FS=9.518;HRun=0;HaplotypeScore=99.3452;InbreedingCoeff=0.1978;MQ=28.93;MQ0=242;MQRankSum=-3.755;QD=1.20;ReadPosRankSum=-0.881;VQSLOD=1.0856;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:14:23.07:0,23,213	0/1:16,0:13:14.74:15,0,76	./.	./.	0/1:44,0:31:5.66:6,0,35	0/0:32,0:25:35.93:0,36,815	0/0:39,0:24:24.06:0,24,442	./.	0/0:17,0:17:21.13:0,21,108	0/0:30,0:20:21.07:0,21,588	0/0:18,0:16:24.05:0,24,633	0/0:33,0:18:11.56:0,12,102	1/1:16,17:22:11.82:238,12,0	0/0:30,0:19:11:0,11,56	0/1:41,0:27:3.63:4,0,69	0/0:4,0:1:2.94:0,3,18	0/0:44,0:27:27.09:0,27,760	0/0:38,0:30:27.80:0,28,703	./.	0/0:13,0:6:3.01:0,3,38	./.	0/0:25,0:18:8.94:0,9,130	0/0:25,0:13:8.52:0,9,118	0/0:36,0:18:8.73:0,9,71	0/0:35,0:29:42.14:0,42,1087	0/0:38,0:15:12.04:0,12,230	0/0:21,0:9:2.90:0,3,16	0/0:50,0:15:2.80:0,3,13
chr10	100918753	.	CTT	C	4056.11	PASS	AB=0.871;AC=28;AF=0.500;AN=56;BaseQRankSum=11.328;DP=509;FS=3.795;HRun=4;HaplotypeScore=78.2329;InbreedingCoeff=0.3357;MQ=49.57;MQ0=40;MQRankSum=-2.257;QD=13.75;ReadPosRankSum=0.463;VQSLOD=0.1213;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:23,2:17:74.52:247,0,75	1/1:4,7:10:23.91:311,24,0	0/1:6,0:4:12.42:12,0,80	0/0:6,0:3:0.60:0,1,38	0/1:24,2:26:14.11:14,0,804	0/0:19,0:18:48.52:0,49,691	0/1:28,0:22:3.60:4,0,649	1/1:9,5:6:6.41:201,6,0	0/0:19,0:19:42.97:0,43,446	0/0:19,0:17:48.15:0,48,670	0/0:21,0:21:47.43:0,47,747	1/1:15,8:17:12.52:347,13,0	0/0:28,0:27:37.04:0,37,503	0/0:13,0:13:26.66:0,27,291	0/1:8,7:15:33.20:185,0,33	1/1:14,1:12:28.13:424,28,0	0/0:25,0:20:12.23:0,12,682	0/0:34,0:32:82.54:0,83,1137	1/1:3,0:1:3.01:43,3,0	1/1:11,0:10:24.07:311,24,0	1/1:4,5:5:3.01:42,3,0	0/1:11,3:13:17.37:275,0,17	1/1:15,4:16:20.29:520,20,0	1/1:21,2:18:2.68:365,3,0	0/0:30,0:28:78.25:0,78,1168	0/1:24,0:16:46.41:395,0,46	0/1:4,7:9:5.45:115,0,5	1/1:17,0:13:8.47:246,8,0
chr10	100918755	.	T	TC	4209.15	PASS	AB=0.858;AC=28;AF=0.500;AN=56;BaseQRankSum=11.232;DP=479;FS=5.245;HRun=0;HaplotypeScore=74.0937;InbreedingCoeff=0.3367;MQ=53.62;MQ0=25;MQRankSum=-2.041;QD=15.42;ReadPosRankSum=1.539;VQSLOD=5.3902;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,9:16:80.26:268,0,80	1/1:10,0:10:23.87:310,24,0	0/1:9,0:6:9.28:9,0,103	0/0:7,0:4:3:0,3,42	0/1:26,0:26:29.10:29,0,740	0/0:17,1:18:49.97:0,50,659	0/1:25,1:22:6.29:6,0,642	1/1:11,0:6:2.24:196,2,0	0/0:19,0:19:52.24:0,52,573	0/0:17,0:17:48.15:0,48,647	0/0:20,0:20:47.40:0,47,666	1/1:10,12:17:12.46:370,12,0	0/0:27,0:26:42.49:0,42,532	0/0:13,0:13:31.30:0,31,356	0/1:13,1:14:34.63:165,0,35	1/1:2,13:12:8.70:403,9,0	0/0:22,2:20:12.61:0,13,668	0/0:33,1:32:38.83:0,39,1020	1/1:1,1:1:3.01:43,3,0	1/1:3,10:12:27.01:368,27,0	1/1:8,1:5:3.01:42,3,0	0/1:4,6:10:17.39:275,0,17	1/1:7,12:17:20.34:538,20,0	1/1:9,13:17:15.11:397,15,0	0/0:27,0:26:78.25:0,78,1068	0/1:8,12:15:49.13:431,0,49	0/1:11,0:10:5.46:115,0,5	1/1:5,6:7:7.10:243,7,0
chr10	100918769	.	TC	T	88.61	PASS	AB=0.733;AC=3;AF=0.054;AN=56;BaseQRankSum=3.804;DP=475;FS=0.000;HRun=1;HaplotypeScore=95.1359;InbreedingCoeff=0.7254;MQ=59.32;MQ0=11;MQRankSum=-4.435;QD=4.03;ReadPosRankSum=-0.665;VQSLOD=-0.1206;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:13:20.27:0,20,162	1/1:5,6:11:13.05:126,13,0	0/0:16,0:13:39.04:0,39,512	0/0:9,0:6:13.76:0,14,179	0/0:28,0:28:69.23:0,69,1084	0/0:18,0:18:51.13:0,51,749	0/0:17,0:15:44.96:0,45,638	0/0:13,0:11:33.10:0,33,452	0/0:21,0:21:60.20:0,60,945	0/0:16,0:16:45.14:0,45,679	0/0:22,0:22:54.65:0,55,841	0/0:25,0:21:46.30:0,46,368	0/0:26,0:25:63.09:0,63,904	0/0:12,0:12:33.03:0,33,490	0/1:7,3:11:2.20:63,0,2	0/0:22,0:19:54.13:0,54,765	0/0:18,0:15:39.06:0,39,545	0/0:27,0:25:66.18:0,66,1020	0/0:4,0:3:9.03:0,9,131	0/0:16,0:16:39.06:0,39,566	0/0:9,0:7:12.04:0,12,170	0/0:11,0:11:23.88:0,24,201	0/0:20,0:19:50.46:0,50,432	0/0:21,1:19:38.97:0,39,293	0/0:26,0:25:72.20:0,72,1107	0/0:17,0:13:39.13:0,39,587	0/0:13,0:13:21.07:0,21,301	0/0:7,0:6:18.06:0,18,272
chr10	100918770	.	C	CT	398.65	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.212;DP=476;FS=2.115;HRun=2;HaplotypeScore=96.0429;InbreedingCoeff=0.9264;MQ=61.54;MQ0=10;MQRankSum=-3.930;QD=18.12;ReadPosRankSum=-0.849;VQSLOD=3.4601;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:13:19.31:0,19,116	1/1:8,3:11:30.04:323,30,0	0/0:17,0:14:39.09:0,39,450	0/0:10,0:7:11.94:0,12,148	0/0:29,0:29:69.21:0,69,840	0/0:18,0:18:46.96:0,47,560	0/0:17,0:15:37.67:0,38,441	0/0:13,0:11:33.09:0,33,385	0/0:21,0:21:60.19:0,60,744	0/0:16,0:16:39.12:0,39,479	0/0:21,0:21:53.90:0,54,638	0/0:25,0:21:42.93:0,43,248	0/0:26,0:25:63.18:0,63,748	0/0:12,0:12:31.34:0,31,375	1/1:8,3:11:18.03:195,18,0	0/0:22,0:19:54.17:0,54,661	0/0:18,0:15:33.06:0,33,388	0/0:26,0:24:63.16:0,63,763	0/0:4,0:3:9.03:0,9,111	0/0:17,0:17:39.12:0,39,478	0/0:11,0:9:12.04:0,12,148	0/0:11,0:11:22.97:0,23,118	0/0:21,0:20:49:0,49,284	0/0:22,0:19:33.10:0,33,177	0/0:24,0:23:69.16:0,69,827	0/0:16,0:13:36.11:0,36,444	0/0:12,0:12:21.07:0,21,258	0/0:7,0:6:18.06:0,18,222
chr10	100919759	.	ACG	A	2676.49	PASS	AB=0.908;AC=17;AF=0.304;AN=56;BaseQRankSum=12.804;DP=900;FS=52.550;HRun=0;HaplotypeScore=314.1266;InbreedingCoeff=0.6775;MQ=38.90;MQ0=10;MQRankSum=-10.380;QD=8.39;ReadPosRankSum=-7.047;VQSLOD=1.1307;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,1:42:62.64:0,63,1223	0/0:10,0:10:23.92:0,24,347	0/0:36,0:17:41.03:0,41,379	0/1:36,0:19:17.22:17,0,416	0/0:51,1:52:41.81:0,42,713	0/0:19,0:19:32.92:0,33,522	0/0:24,0:24:56.36:0,56,915	1/1:20,11:29:59.37:681,59,0	0/0:28,0:28:39.55:0,40,686	0/1:69,0:68:44.91:45,0,1761	0/0:33,1:34:35.79:0,36,569	0/0:40,0:40:27.87:0,28,563	0/0:31,0:31:22.43:0,22,716	0/0:39,0:39:60.30:0,60,1052	0/0:45,0:45:42.90:0,43,823	1/1:27,9:36:20.81:220,21,0	0/0:19,0:19:27.92:0,28,597	0/0:22,0:22:21.73:0,22,815	1/1:8,4:12:14.29:240,14,0	1/1:31,12:43:41.37:499,41,0	1/1:2,26:26:4.28:64,4,0	0/0:24,1:25:24.05:0,24,421	0/0:45,1:46:35.94:0,36,585	0/0:22,0:22:41.98:0,42,617	0/0:46,1:47:42:0,42,910	1/1:25,7:32:42.47:568,42,0	0/1:18,11:29:34.69:519,0,35	1/1:3,0:3:1.64:15,2,0
chr10	100919778	.	CAT	C	1417.33	PASS	AB=0.777;AC=8;AF=0.143;AN=56;BaseQRankSum=10.960;DP=943;FS=142.519;HRun=0;HaplotypeScore=331.5201;InbreedingCoeff=-0.1496;MQ=36.86;MQ0=11;MQRankSum=-9.818;QD=5.31;ReadPosRankSum=0.981;VQSLOD=-0.6267;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:59.91:0,60,1063	0/0:11,0:11:18.06:0,18,320	0/0:37,1:15:41.86:0,42,697	0/0:45,0:19:54.10:0,54,884	0/0:51,0:51:33.10:0,33,604	0/0:19,0:19:21.07:0,21,405	0/0:22,0:22:46.45:0,46,919	0/1:22,12:32:99:431,0,303	0/0:35,0:35:42.61:0,43,790	0/1:75,0:73:95.73:96,0,1796	0/0:40,0:40:24.08:0,24,463	0/0:38,0:38:4:0,4,435	0/0:38,0:38:48.06:0,48,874	0/0:40,0:40:60.68:0,61,1145	0/0:53,0:53:43.95:0,44,780	0/1:27,10:37:40.63:110,0,41	0/0:17,0:17:39.12:0,39,669	0/0:19,0:19:46.29:0,46,818	0/1:8,6:14:99:234,0,151	0/1:28,16:44:15.64:16,0,146	0/0:17,0:16:3:0,3,25	0/0:40,0:40:21.05:0,21,370	0/0:49,0:49:24.03:0,24,392	0/0:14,0:14:12.04:0,12,231	0/0:50,0:50:42.75:0,43,919	0/1:17,15:31:99:470,0,139	0/1:22,6:28:99:158,0,258	0/1:2,1:3:7.97:37,0,8
chr10	100919796	.	CAT	C	683.85	PASS	AB=0.928;AC=10;AF=0.179;AN=56;BaseQRankSum=8.388;DP=937;FS=49.385;HRun=0;HaplotypeScore=313.0227;InbreedingCoeff=0.0600;MQ=36.77;MQ0=10;MQRankSum=-6.820;QD=2.20;ReadPosRankSum=0.510;VQSLOD=1.1652;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,2:34:38.54:0,39,665	0/0:12,1:13:16.63:0,17,311	0/0:39,0:13:20.84:0,21,478	0/0:44,0:22:42.97:0,43,875	0/0:44,4:48:24.07:0,24,431	0/0:21,1:22:18.01:0,18,309	0/0:17,1:18:30.56:0,31,545	0/1:39,0:34:67.88:68,0,852	0/0:34,0:34:33.54:0,34,523	0/1:69,9:74:99:355,0,1550	0/0:36,2:38:21.54:0,22,406	0/1:28,11:40:23.85:24,0,326	0/0:39,1:40:55.61:0,56,923	0/0:39,1:40:54.63:0,55,969	0/0:50,2:52:37.74:0,38,831	0/1:36,0:36:23.72:24,0,78	0/0:17,0:17:30.31:0,30,421	0/0:16,0:16:39.57:0,40,553	0/1:18,0:17:39.15:39,0,261	1/1:33,8:41:10.85:107,11,0	0/0:11,0:9:0:0,0,0	0/0:16,27:43:15.05:0,15,288	0/0:38,13:51:12.04:0,12,231	0/0:14,0:14:12.03:0,12,198	0/0:49,3:52:31.96:0,32,592	0/1:30,4:33:99:157,0,646	0/1:18,4:22:47.93:48,0,345	0/1:3,0:3:7.99:8,0,8
chr10	100919797	.	A	ACG	323.01	PASS	AB=0.985;AC=8;AF=0.143;AN=56;BaseQRankSum=9.413;DP=930;FS=59.409;HRun=0;HaplotypeScore=316.8312;InbreedingCoeff=0.2297;MQ=36.77;MQ0=10;MQRankSum=-7.204;QD=1.50;ReadPosRankSum=2.240;VQSLOD=0.7519;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:15.37:0,15,557	0/0:12,1:13:20.13:0,20,299	0/0:39,0:13:33.58:0,34,496	0/0:44,0:22:54.17:0,54,833	0/0:45,2:47:22.63:0,23,389	0/0:22,0:22:17.78:0,18,292	0/0:18,0:18:18.34:0,18,472	0/0:41,0:36:38.06:0,38,886	0/0:34,0:34:32.63:0,33,526	0/1:72,5:73:99:335,0,1460	0/0:36,2:38:20.63:0,21,342	0/0:39,0:39:20.99:0,21,305	0/0:38,2:40:57.24:0,57,840	0/0:40,0:40:53.92:0,54,878	0/0:51,1:52:34.40:0,34,687	0/1:35,1:36:0.36:0,0,77	0/0:17,0:17:30.03:0,30,442	0/0:16,0:16:38.63:0,39,578	0/1:15,0:14:2.26:2,0,255	1/1:40,1:41:9.50:42,9,0	0/1:10,0:8:0:0,0,0	0/0:42,1:43:14.96:0,15,244	0/0:44,6:50:11.12:0,11,194	0/0:13,1:14:11.99:0,12,193	0/0:51,1:52:36.25:0,36,588	0/1:33,0:32:51.21:51,0,680	0/0:22,0:22:2.15:0,2,325	0/1:3,0:3:4.72:5,0,46
chr10	100919800	.	C	CGT	576.18	PASS	AB=0.948;AC=9;AF=0.161;AN=56;BaseQRankSum=6.172;DP=918;FS=41.828;HRun=0;HaplotypeScore=317.0212;InbreedingCoeff=0.1346;MQ=36.70;MQ0=11;MQRankSum=-7.177;QD=3.00;ReadPosRankSum=-2.656;VQSLOD=1.1421;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:30.11:0,30,529	0/0:12,0:12:18.01:0,18,272	0/0:38,0:13:33.17:0,33,469	0/0:38,0:21:54.18:0,54,870	0/0:46,0:46:22.63:0,23,387	0/0:22,0:22:17.78:0,18,282	0/0:19,0:19:18.34:0,18,467	0/1:35,1:31:99:133,0,789	0/0:33,0:33:29.62:0,30,482	0/0:76,0:74:99:0,99,1968	0/0:37,0:40:20.63:0,21,342	0/0:39,0:39:24.91:0,25,327	0/0:40,0:40:54.87:0,55,818	0/0:40,0:40:53.92:0,54,870	0/0:53,0:53:46.24:0,46,737	0/1:33,3:36:78.44:162,0,78	0/0:17,0:17:32.89:0,33,490	0/0:16,0:16:35.54:0,36,530	0/1:10,2:11:99:101,0,249	1/1:39,1:40:11.95:198,12,0	0/1:12,0:10:0.21:1,0,0	0/0:41,0:42:14.96:0,15,244	0/0:52,0:54:11.10:0,11,194	0/0:13,0:13:8.72:0,9,146	0/0:53,0:53:38.54:0,39,588	0/1:31,1:31:63.45:63,0,762	0/1:19,1:21:41.46:41,0,358	0/1:3,0:3:14.09:14,0,31
chr10	100919804	.	C	CGT	95.53	PASS	AB=0.978;AC=7;AF=0.125;AN=56;BaseQRankSum=5.793;DP=900;FS=25.136;HRun=0;HaplotypeScore=303.6362;InbreedingCoeff=0.2433;MQ=36.51;MQ0=11;MQRankSum=-5.303;QD=0.62;ReadPosRankSum=-2.438;VQSLOD=0.8040;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:31.60:0,32,531	0/0:12,0:12:17.40:0,17,281	0/0:35,0:12:28.38:0,28,435	0/0:36,0:20:51.13:0,51,802	0/0:46,0:46:19.62:0,20,341	0/0:22,0:22:17.73:0,18,264	0/0:18,0:18:27.34:0,27,438	0/0:30,0:25:24.57:0,25,844	0/0:31,0:31:23.60:0,24,390	0/0:77,0:73:99:0,123,1763	0/0:41,0:41:20.63:0,21,342	0/0:39,0:39:25.96:0,26,321	0/0:39,0:39:51.39:0,51,802	0/0:39,0:39:50.90:0,51,807	0/0:53,0:53:49.45:0,49,775	0/1:34,2:36:29.63:30,0,87	0/0:16,0:16:26.91:0,27,396	0/0:16,0:16:39.11:0,39,597	0/1:15,0:14:17.39:17,0,375	1/1:37,3:40:11.49:90,11,0	0/1:11,0:9:0.04:0,0,0	0/0:43,0:43:14.96:0,15,244	0/0:52,0:54:11.07:0,11,194	0/0:12,0:12:8.99:0,9,147	0/0:50,0:50:35.50:0,35,499	0/1:30,2:31:52.04:52,0,820	0/1:21,0:21:31.65:32,0,452	0/0:3,0:3:7.36:0,7,60
chr10	100919806	.	C	CAT	190.55	PASS	AB=0.980;AC=5;AF=0.089;AN=56;BaseQRankSum=8.769;DP=882;FS=36.795;HRun=0;HaplotypeScore=301.8987;InbreedingCoeff=0.3805;MQ=36.61;MQ0=7;MQRankSum=-7.193;QD=1.45;ReadPosRankSum=1.454;VQSLOD=1.4392;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:33:27.59:0,28,437	0/0:12,0:12:17.89:0,18,214	0/0:31,0:11:24:0,24,295	0/0:31,0:20:48.16:0,48,699	0/0:44,0:44:19.62:0,20,307	0/0:21,0:21:14.77:0,15,220	0/0:18,0:18:23.57:0,24,352	0/0:29,0:24:48.80:0,49,442	0/0:30,0:30:23.60:0,24,352	0/1:72,5:73:99:259,0,1134	0/0:41,0:41:20.53:0,21,308	0/0:39,0:39:18.12:0,18,269	0/0:39,0:39:39.63:0,40,678	0/0:38,0:38:47.71:0,48,702	0/0:53,0:53:48.93:0,49,682	0/0:35,0:36:7.28:0,7,89	0/0:15,0:15:23.84:0,24,299	0/0:16,0:16:36.91:0,37,464	0/0:15,0:14:5.97:0,6,179	1/1:40,0:40:7.17:24,7,0	0/1:11,0:9:0:0,0,0	0/0:42,0:43:14.93:0,15,220	0/0:54,0:54:11.59:0,12,133	0/0:11,0:12:8.99:0,9,132	0/0:42,6:48:27.10:0,27,379	0/0:32,0:31:45.87:0,46,556	0/0:21,0:21:14.74:0,15,326	0/1:3,0:3:5.73:6,0,49
chr10	100919807	.	ATG	A	431.10	PASS	AB=0.991;AC=7;AF=0.130;AN=54;BaseQRankSum=8.676;DP=873;FS=64.676;HRun=0;HaplotypeScore=289.1192;InbreedingCoeff=0.1398;MQ=36.58;MQ0=7;MQRankSum=-7.225;QD=2.14;ReadPosRankSum=2.457;VQSLOD=0.4166;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:33.79:0,34,623	0/1:12,0:12:5.92:6,0,267	0/0:29,0:10:23.97:0,24,427	0/0:30,0:19:45.87:0,46,907	0/0:44,0:44:20.96:0,21,425	0/0:21,0:21:15.05:0,15,304	0/0:17,0:17:19.97:0,20,481	0/0:29,0:24:29.76:0,30,543	0/0:30,0:30:24.08:0,24,484	0/1:74,1:72:99:316,0,1423	0/0:41,0:41:21.07:0,21,426	0/1:39,0:39:5.50:5,0,350	0/0:39,0:39:47.79:0,48,933	0/0:37,0:37:48.08:0,48,969	0/0:53,0:53:49.98:0,50,950	0/0:36,0:36:7.98:0,8,107	0/0:15,0:15:27.44:0,27,396	0/0:16,0:16:31.41:0,31,575	0/0:15,0:14:12.19:0,12,140	1/1:37,3:40:9.42:41,9,0	./.	0/0:42,0:42:15.03:0,15,303	0/0:54,0:54:12.92:0,13,212	0/0:12,0:12:8.82:0,9,182	0/0:47,1:48:22.11:0,22,531	0/1:31,1:31:99:161,0,467	0/0:20,1:21:6.84:0,7,280	0/1:3,0:3:25.91:26,0,28
chr10	100919820	.	C	CAT	332.40	PASS	AB=0.941;AC=13;AF=0.232;AN=56;BaseQRankSum=5.313;DP=789;FS=11.197;HRun=0;HaplotypeScore=261.9454;InbreedingCoeff=0.2241;MQ=34.40;MQ0=6;MQRankSum=-5.300;QD=0.87;ReadPosRankSum=-1.062;VQSLOD=0.8276;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:3.48:37,3,0	0/0:11,2:13:8.47:0,8,61	0/1:18,1:5:1.45:1,0,97	0/0:22,0:13:27.01:0,27,328	0/0:44,3:47:10.62:0,11,131	0/0:19,0:19:2.84:0,3,44	0/0:14,1:15:14.02:0,14,140	0/0:22,0:17:17.74:0,18,116	0/0:31,0:31:11.53:0,12,107	0/1:64,8:69:99:379,0,789	0/0:34,3:37:5.45:0,5,67	0/0:38,1:39:5.51:0,6,47	0/1:29,2:31:6.86:7,0,84	0/0:33,0:33:17.44:0,17,146	0/1:49,0:49:1.35:1,0,78	0/1:30,4:35:4.21:4,0,13	0/0:11,0:11:6.47:0,6,52	0/0:13,0:13:30.68:0,31,365	0/0:11,0:10:12.61:0,13,76	1/1:35,3:38:2.24:6,2,0	0/1:8,0:7:0:0,0,0	0/1:38,1:39:0:0,0,0	0/1:43,7:50:0:0,0,0	0/1:12,1:13:0:0,0,0	0/0:39,3:42:8.52:0,9,95	0/0:30,0:30:37.16:0,37,439	0/0:21,0:21:4.51:0,5,83	0/0:3,0:3:3.43:0,3,20
chr10	100921435	.	G	GA	4731.34	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.110;DP=655;FS=16.858;HRun=7;HaplotypeScore=89.6765;InbreedingCoeff=0.9667;MQ=77.52;MQ0=0;MQRankSum=-3.273;QD=23.90;ReadPosRankSum=-2.503;VQSLOD=2.9189;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:81.48:0,81,440	0/0:7,0:7:21.03:0,21,203	0/0:17,0:17:31.80:0,32,348	0/0:15,0:15:39.01:0,39,363	0/0:25,0:25:69.11:0,69,663	0/0:27,0:27:69.10:0,69,666	0/0:27,0:27:81.12:0,81,777	1/1:7,17:25:46.28:606,46,0	0/0:24,0:24:57.08:0,57,550	0/0:27,0:27:72.11:0,72,693	0/0:25,0:25:69.09:0,69,661	0/0:17,0:17:45.07:0,45,434	0/0:16,0:16:39.05:0,39,377	0/0:31,0:31:81.12:0,81,782	0/0:26,0:26:69.11:0,69,666	1/1:1,18:20:47.98:546,48,0	0/0:29,0:29:81.10:0,81,775	0/0:15,0:15:37.30:0,37,350	1/1:9,16:26:44.94:536,45,0	1/1:4,30:35:86.90:924,87,0	1/1:4,25:30:51.08:708,51,0	0/0:19,0:19:45.04:0,45,429	0/0:16,0:16:36.05:0,36,347	0/0:30,0:30:77.15:0,77,730	0/0:20,0:20:54.08:0,54,522	1/1:5,19:24:31.14:609,31,0	1/1:5,25:30:54.11:647,54,0	1/1:3,5:8:2.40:155,2,0
chr10	100921442	.	AT	A	2332.35	PASS	AB=0.989;AC=16;AF=0.286;AN=56;BaseQRankSum=16.450;DP=647;FS=9.397;HRun=1;HaplotypeScore=87.0600;InbreedingCoeff=0.8227;MQ=77.83;MQ0=0;MQRankSum=-3.129;QD=10.14;ReadPosRankSum=-1.950;VQSLOD=0.0966;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:42,1:43:99:109,0,103	0/0:7,0:7:21.07:0,21,300	0/0:18,0:18:51.08:0,51,643	0/0:16,0:16:47.47:0,47,615	0/0:29,0:29:86.31:0,86,1047	0/0:29,0:29:87.05:0,87,1156	0/0:28,0:28:84.27:0,84,1181	1/1:24,1:25:60.62:415,61,0	0/0:22,0:22:66.18:0,66,903	0/0:27,0:27:81.24:0,81,1107	0/0:28,0:28:84.23:0,84,1126	0/0:18,0:18:53.94:0,54,700	0/0:14,0:14:42.12:0,42,581	0/0:28,0:28:84.28:0,84,1192	0/0:28,0:28:84.16:0,84,1086	1/1:20,0:20:49.68:297,50,0	0/0:29,0:29:87.27:0,87,1218	0/0:13,0:13:39.11:0,39,531	1/1:21,0:21:45.49:258,45,0	1/1:31,0:31:68.48:352,68,0	1/1:29,0:29:60.21:361,60,0	0/0:21,0:21:57.12:0,57,743	0/0:13,0:13:39.13:0,39,555	0/0:27,0:27:74.08:0,74,1107	0/0:22,0:22:66.18:0,66,887	0/1:24,0:24:21.74:273,0,22	1/1:27,1:28:57.37:339,57,0	1/1:8,1:9:16.01:131,16,0
chr10	100921636	.	GT	G	9563.06	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=14.695;DP=673;FS=0.000;HRun=6;HaplotypeScore=79.4453;InbreedingCoeff=0.9842;MQ=81.31;MQ0=0;MQRankSum=-1.852;QD=27.96;ReadPosRankSum=1.220;VQSLOD=5.2829;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:63.16:677,63,0	1/1:1,3:4:5.53:64,6,0	0/0:16,0:16:42.08:0,42,505	0/0:24,0:24:53.88:0,54,606	0/0:36,0:36:93.28:0,93,1195	0/0:30,0:30:87.27:0,87,1129	0/0:24,0:24:72.22:0,72,932	1/1:4,37:41:99:1151,108,0	0/0:17,0:17:51.17:0,51,671	0/0:35,0:35:93.30:0,93,1213	0/0:15,0:15:42.14:0,42,553	1/1:1,26:27:72.18:773,72,0	0/0:17,0:17:51.17:0,51,671	0/0:32,0:32:90.29:0,90,1184	1/1:0,23:23:66.17:709,66,0	1/1:0,17:17:42.11:451,42,0	0/0:33,0:33:90.27:0,90,1154	0/0:31,0:31:90.25:0,90,1161	1/1:5,17:22:51.11:539,51,0	1/1:1,24:25:60.14:645,60,0	1/1:2,27:29:61.27:818,61,0	1/1:2,20:22:57.14:612,57,0	1/1:1,32:33:90.23:967,90,0	1/1:0,25:25:66.17:709,66,0	0/0:21,0:21:63.19:0,63,815	1/1:1,21:22:63.16:675,63,0	1/1:0,17:17:45.11:483,45,0	1/1:2,10:12:27.04:290,27,0
chr10	100921825	.	CAT	C	4611.56	PASS	AB=0.543;AC=25;AF=0.446;AN=56;BaseQRankSum=17.990;DP=554;FS=9.766;HRun=0;HaplotypeScore=154.7218;InbreedingCoeff=0.9149;MQ=75.87;MQ0=0;MQRankSum=-16.656;QD=20.96;ReadPosRankSum=1.879;VQSLOD=5.0836;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:11:29.57:264,30,0	0/0:18,0:18:54.19:0,54,990	0/0:18,0:18:48.15:0,48,830	0/0:13,0:12:32.87:0,33,475	0/0:34,0:34:99:0,99,1758	0/0:32,0:32:87.30:0,87,1595	0/0:16,0:16:45.11:0,45,718	1/1:7,10:25:49.54:436,50,0	0/0:24,0:24:66.23:0,66,1210	0/0:22,0:22:66.22:0,66,1184	0/0:29,0:29:87.27:0,87,1535	1/1:5,15:22:49.70:440,50,0	0/0:17,0:17:42.13:0,42,725	0/0:22,0:22:66.23:0,66,1201	0/0:20,0:20:57.17:0,57,977	1/1:3,7:10:21.04:207,21,0	0/0:20,0:20:60.18:0,60,1067	0/0:21,0:21:60.21:0,60,1088	1/1:2,8:14:31.81:304,32,0	1/1:3,25:30:68.65:639,69,0	1/1:1,8:9:20.26:164,20,0	1/1:4,21:25:57.04:540,57,0	1/1:0,21:21:54.08:516,54,0	1/1:2,4:6:9.01:86,9,0	0/0:28,0:28:81.28:0,81,1485	0/1:3,16:19:3.91:440,0,4	1/1:4,21:25:57.07:553,57,0	1/1:1,0:2:2.98:21,3,0
chr10	100921831	.	CATTAACAGT	C	12608.64	PASS	AB=0.515;AC=25;AF=0.446;AN=56;BaseQRankSum=17.435;DP=503;FS=9.976;HRun=0;HaplotypeScore=189.1806;InbreedingCoeff=0.8932;MQ=77.33;MQ0=0;MQRankSum=-17.263;QD=69.66;ReadPosRankSum=2.480;VQSLOD=4.0452;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,10:11:27.56:703,28,0	0/0:19,0:19:57.17:0,57,2434	0/0:18,0:18:42.09:0,42,1492	0/0:12,0:11:32.65:0,33,719	0/0:32,0:32:96.32:0,96,4461	0/0:32,0:32:93.32:0,93,4605	0/0:12,0:12:36.11:0,36,1628	1/1:4,10:14:42.14:1040,42,0	0/0:23,0:23:69.24:0,69,3338	0/0:24,0:24:72.24:0,72,3327	0/0:27,0:27:75.24:0,75,3306	1/1:2,15:17:51.18:1302,51,0	0/0:11,0:11:33.11:0,33,1638	0/0:23,0:23:69.24:0,69,3151	0/0:19,0:19:57.20:0,57,2695	1/1:0,7:7:21.07:570,21,0	0/0:19,0:19:57.18:0,57,2635	0/0:22,0:22:63.18:0,63,2851	1/1:3,8:11:33.11:782,33,0	1/1:2,25:27:66.70:1752,67,0	1/1:0,8:8:18.06:427,18,0	1/1:3,18:21:57.20:1505,57,0	1/1:0,21:21:54.19:1449,54,0	1/1:0,4:4:8.96:241,9,0	0/0:29,0:29:87.30:0,87,4196	0/1:1,16:17:97.81:1270,0,98	1/1:1,20:21:57.20:1518,57,0	1/1:1,0:1:3.01:51,3,0
chr10	100921838	.	AG	A	1109.19	PASS	AB=0.923;AC=24;AF=0.444;AN=54;BaseQRankSum=17.635;DP=494;FS=4.232;HRun=1;HaplotypeScore=147.1462;InbreedingCoeff=0.8445;MQ=75.78;MQ0=0;MQRankSum=-15.699;QD=6.06;ReadPosRankSum=4.102;VQSLOD=0.8985;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,2:11:21.95:87,22,0	0/0:17,0:17:51.16:0,51,789	0/0:18,0:18:28.95:0,29,509	0/1:9,2:10:43.15:43,0,241	0/0:33,0:33:96.33:0,96,1532	0/0:31,0:31:93.32:0,93,1487	0/0:11,0:11:33.11:0,33,528	1/1:10,0:10:23.71:83,24,0	0/0:24,0:24:72.23:0,72,1128	0/0:27,0:27:81.28:0,81,1288	0/0:22,0:22:66.23:0,66,1055	1/1:15,0:15:36.18:133,36,0	0/0:13,0:13:39.13:0,39,623	0/0:23,0:23:69.22:0,69,1079	0/0:21,0:21:63.20:0,63,980	1/1:7,2:9:19.50:72,20,0	0/0:19,0:19:57.19:0,57,908	0/0:21,0:21:60.20:0,60,958	1/1:9,0:9:19.73:87,20,0	1/1:25,0:25:49.80:168,50,0	1/1:9,0:9:13.71:59,14,0	1/1:18,1:19:45.69:173,46,0	1/1:21,0:21:42.68:144,43,0	1/1:5,0:5:6.75:24,7,0	0/0:31,0:31:93.30:0,93,1449	0/1:17,0:17:6.67:90,0,7	1/1:20,1:20:45.56:161,46,0	./.
chr10	100921840	.	T	TAC	1305.99	PASS	AB=1.000;AC=23;AF=0.426;AN=54;BaseQRankSum=17.486;DP=532;FS=5.750;HRun=0;HaplotypeScore=170.6949;InbreedingCoeff=0.8902;MQ=73.54;MQ0=0;MQRankSum=-17.045;QD=6.19;ReadPosRankSum=2.638;VQSLOD=3.1398;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,2:14:14.48:70,14,0	0/0:15,0:15:45.15:0,45,687	0/0:18,0:18:39.89:0,40,531	0/0:11,0:10:20.52:0,21,261	0/0:33,0:33:96.31:0,96,1443	0/0:32,0:32:93.32:0,93,1423	0/0:12,0:12:36.11:0,36,528	1/1:20,0:20:49.75:438,50,0	0/0:24,0:24:72.23:0,72,1079	0/0:28,0:28:81.25:0,81,1184	0/0:22,0:22:66.22:0,66,1008	1/1:19,0:19:29.45:210,29,0	0/0:13,0:13:39.13:0,39,597	0/0:22,0:22:66.22:0,66,1008	0/0:20,0:20:60.20:0,60,919	1/1:12,1:13:22.26:185,22,0	0/0:19,0:19:54.18:0,54,825	0/0:22,0:22:59.96:0,60,916	1/1:11,0:11:19.70:129,20,0	1/1:31,0:31:27.81:61,28,0	1/1:9,0:9:8.87:61,9,0	1/1:19,1:20:25.95:97,26,0	1/1:24,0:24:20.78:44,21,0	1/1:6,0:6:3.34:7,3,0	0/0:30,0:30:87.30:0,87,1332	0/1:19,0:19:15.17:41,0,15	1/1:23,1:23:35.48:178,35,0	./.
chr10	100924365	.	CT	C	552.57	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.290;DP=415;FS=2.428;HRun=10;HaplotypeScore=44.1784;InbreedingCoeff=0.8478;MQ=73.50;MQ0=0;MQRankSum=0.458;QD=16.25;ReadPosRankSum=0.991;VQSLOD=3.6997;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:51.10:0,51,538	0/0:5,0:5:6.27:0,6,95	0/0:12,1:11:18:0,18,177	0/0:10,0:9:2.87:0,3,25	0/0:21,0:21:51.14:0,51,564	0/0:16,0:16:42.11:0,42,457	0/0:21,0:21:54.15:0,54,597	0/0:32,0:32:81.20:0,81,882	0/0:12,0:12:36.10:0,36,397	0/0:18,0:18:41.84:0,42,434	0/0:16,0:16:46.01:0,46,500	1/1:2,12:14:26.98:234,27,0	0/0:18,0:18:49.02:0,49,533	0/0:9,0:9:24.04:0,24,250	0/0:13,0:13:33.08:0,33,356	0/0:18,0:18:42.11:0,42,465	0/0:28,0:28:65.25:0,65,757	0/0:23,0:24:60:0,60,645	0/0:12,0:12:4.12:0,4,266	0/0:10,0:10:27.07:0,27,299	0/0:8,0:8:21.06:0,21,232	1/1:0,3:3:6:52,6,0	1/1:0,6:6:14.99:130,15,0	1/1:0,11:11:32.99:287,33,0	0/0:8,0:9:26.91:0,27,280	0/0:15,0:15:42.11:0,42,462	0/0:18,1:19:22.08:0,22,472	0/0:13,0:13:15.04:0,15,162
chr10	100924774	.	AT	A	4878.41	PASS	AB=0.630;AC=29;AF=0.518;AN=56;BaseQRankSum=9.515;DP=399;FS=7.181;HRun=9;HaplotypeScore=42.4499;InbreedingCoeff=0.9076;MQ=91.62;MQ0=0;MQRankSum=-0.167;QD=21.40;ReadPosRankSum=3.223;VQSLOD=5.3487;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,11:13:30.01:275,30,0	1/1:0,2:2:6:55,6,0	0/0:22,1:26:20.07:0,20,502	0/0:12,0:12:20.93:0,21,199	0/0:11,0:11:24.07:0,24,277	0/0:20,0:20:54.15:0,54,614	0/0:12,0:12:36.09:0,36,406	1/1:2,28:30:81:729,81,0	0/0:16,0:16:48.12:0,48,542	0/0:10,0:10:24.07:0,24,277	0/0:17,0:17:42.09:0,42,452	1/1:0,11:11:26.80:247,27,0	0/0:8,0:8:18.04:0,18,200	0/0:11,0:11:33.10:0,33,381	1/1:2,10:12:21.01:192,21,0	1/1:3,15:18:42.02:384,42,0	0/0:11,0:11:30.09:0,30,346	0/0:8,0:8:24.07:0,24,276	1/1:5,12:17:38.99:347,39,0	1/1:5,15:21:38.01:382,38,0	1/1:1,23:24:63.03:577,63,0	1/1:1,13:14:36.02:329,36,0	1/1:5,13:18:39:357,39,0	1/1:0,13:13:33:301,33,0	0/0:9,0:8:27.08:0,27,312	0/1:7,10:17:35:210,0,35	1/1:0,13:13:39.02:357,39,0	1/1:0,5:5:15.01:137,15,0
chr10	100925058	.	TA	T	2153.44	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.264;DP=530;FS=1.026;HRun=5;HaplotypeScore=50.2470;InbreedingCoeff=0.9917;MQ=74.29;MQ0=0;MQRankSum=-0.189;QD=29.10;ReadPosRankSum=1.388;VQSLOD=3.7959;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.20:0,60,820	0/0:7,0:7:21.07:0,21,287	0/0:11,0:11:17.42:0,17,202	0/0:8,0:8:15.04:0,15,189	0/0:18,0:18:54.17:0,54,723	0/0:22,0:22:66.22:0,66,903	0/0:26,0:26:78.25:0,78,1050	0/0:34,0:34:90.28:0,90,1200	0/0:13,0:13:33.11:0,33,451	0/0:17,0:17:51.17:0,51,698	0/0:25,0:25:66.22:0,66,900	1/1:0,18:18:51.15:579,51,0	0/0:18,0:18:54.18:0,54,739	0/0:25,0:25:72.23:0,72,968	0/0:22,0:22:63.20:0,63,847	0/0:24,0:24:63.20:0,63,846	0/0:16,0:16:42.13:0,42,555	0/0:17,0:17:48.16:0,48,653	0/0:19,0:19:57.19:0,57,774	0/0:17,0:17:51.17:0,51,693	0/0:18,0:18:54.16:0,54,712	1/1:1,18:19:45.13:510,45,0	1/1:0,21:21:63.18:715,63,0	1/1:0,16:16:45.13:510,45,0	0/0:13,0:13:39.13:0,39,534	0/0:29,0:29:81.27:0,81,1097	0/0:22,0:22:60.19:0,60,805	0/0:13,0:13:36.12:0,36,492
chr10	100925305	.	A	AAT	2104.71	PASS	AB=0.781;AC=16;AF=0.296;AN=54;BaseQRankSum=-8.196;DP=253;FS=1.392;HRun=0;HaplotypeScore=35.8554;InbreedingCoeff=0.5350;MQ=81.98;MQ0=0;MQRankSum=-0.132;QD=19.86;ReadPosRankSum=-1.795;VQSLOD=2.7546;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:8:11.32:0,11,55	0/0:0,0:5:11.32:0,11,55	0/0:7,0:7:2.48:0,2,12	0/0:12,0:8:2.30:0,2,29	0/0:9,0:9:9.03:0,9,110	0/0:14,0:14:27.08:0,27,329	0/0:6,0:6:6.02:0,6,73	1/1:13,24:37:38.57:1108,39,0	0/0:7,0:7:15.04:0,15,173	0/0:10,0:10:1.87:0,2,117	0/0:3,0:3:6.02:0,6,73	0/0:2,0:6:8.52:0,9,42	0/0:5,0:5:12.02:0,12,134	0/0:4,0:4:9.03:0,9,110	0/0:1,0:8:11.36:0,11,56	1/1:0,5:5:6.02:97,6,0	0/0:13,0:13:33.08:0,33,388	0/0:19,0:19:54.13:0,54,632	0/1:10,3:13:54.91:176,0,55	1/1:4,0:4:6.01:74,6,0	1/1:1,2:3:6.02:97,6,0	0/0:3,0:4:2.84:0,3,14	1/1:3,0:3:2.60:10,3,0	./.	0/0:7,0:7:12.04:0,12,147	0/1:6,3:9:24.63:129,0,25	1/1:7,7:14:21.07:341,21,0	1/1:11,7:18:15.05:243,15,0
chr10	100925853	.	G	GTAC	1539.60	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-6.377;DP=408;FS=3.678;HRun=0;HaplotypeScore=57.5075;InbreedingCoeff=0.9651;MQ=59.76;MQ0=0;MQRankSum=-0.265;QD=42.77;ReadPosRankSum=2.735;VQSLOD=4.4959;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.17:0,51,821	0/0:5,0:5:14.60:0,15,115	0/0:7,0:5:15.05:0,15,241	0/0:9,0:6:14.17:0,14,169	0/0:17,0:17:51.17:0,51,813	0/0:9,0:9:27.09:0,27,441	0/0:8,0:8:24.08:0,24,381	0/0:37,0:37:99:0,105,1637	0/0:5,0:5:15.05:0,15,241	0/0:21,0:21:60.20:0,60,958	0/0:21,0:21:60.20:0,60,969	1/1:1,8:9:24.08:526,24,0	0/0:8,0:8:24.08:0,24,392	0/0:15,0:15:45.12:0,45,681	0/0:12,0:12:31.32:0,31,159	0/0:14,0:14:36.12:0,36,588	0/0:22,0:22:66.22:0,66,1065	0/0:18,0:18:25.71:0,26,746	0/0:15,0:15:39.13:0,39,629	0/0:19,0:18:42.14:0,42,678	0/0:11,0:11:30.09:0,30,465	1/1:1,4:5:12.04:263,12,0	1/1:2,12:15:27.09:576,27,0	1/1:0,7:7:15.05:329,15,0	0/0:19,0:19:57.19:0,57,931	0/0:18,0:18:51.16:0,51,804	0/0:21,0:21:54.18:0,54,866	0/0:24,0:24:63.22:0,63,1029
chr10	100925856	.	C	CT	580.81	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.070;DP=412;FS=0.601;HRun=8;HaplotypeScore=44.0576;InbreedingCoeff=0.9613;MQ=59.52;MQ0=3;MQRankSum=0.704;QD=11.39;ReadPosRankSum=2.250;VQSLOD=1.7585;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.02:0,48,439	1/1:3,2:5:12.01:123,12,0	0/0:7,0:5:14.80:0,15,122	0/0:9,0:6:13.35:0,13,107	0/0:18,0:18:54.03:0,54,494	0/0:9,0:9:27.01:0,27,247	0/0:8,0:8:17.99:0,18,160	0/0:36,0:36:99:0,99,901	0/0:5,0:5:12.01:0,12,110	0/0:22,0:22:59.99:0,60,538	0/0:21,0:21:60.03:0,60,549	1/1:9,0:9:20.77:79,21,0	0/0:9,0:9:24.01:0,24,219	0/0:15,0:15:39.02:0,39,357	1/1:4,8:12:33.10:379,33,0	0/0:13,0:13:36.02:0,36,329	0/0:23,0:23:63.01:0,63,570	0/0:20,0:20:30.30:0,30,394	0/0:15,0:15:42.02:0,42,384	0/0:19,0:18:42:0,42,380	0/0:12,0:12:30.01:0,30,274	1/1:5,0:5:10.39:40,10,0	1/1:13,0:13:23.34:92,23,0	1/1:7,0:7:12.98:49,13,0	0/0:21,0:20:60.01:0,60,543	0/0:18,0:18:48.03:0,48,439	0/0:20,0:20:45:0,45,406	0/0:23,0:21:62.94:0,63,565
chr10	100925865	.	C	CT	281.12	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.417;DP=416;FS=2.059;HRun=8;HaplotypeScore=46.8439;InbreedingCoeff=0.8663;MQ=58.80;MQ0=5;MQRankSum=-0.781;QD=16.54;ReadPosRankSum=-0.553;VQSLOD=3.2186;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:48.02:0,48,439	1/1:2,2:4:11.98:121,12,0	0/0:7,0:5:7.25:0,7,58	0/0:9,0:6:12.69:0,13,97	0/0:19,0:19:51.02:0,51,467	0/0:10,0:10:30.02:0,30,274	0/0:8,0:8:24.01:0,24,219	0/0:36,0:37:95.05:0,95,851	0/0:4,0:4:9:0,9,82	0/0:22,0:22:60.02:0,60,549	0/0:20,0:20:57.03:0,57,522	0/0:9,0:9:27:0,27,241	0/0:9,0:9:24.01:0,24,220	0/0:13,0:13:36.02:0,36,329	1/1:5,8:13:24.07:276,24,0	0/0:15,0:15:39.01:0,39,352	0/0:23,0:23:54.08:0,54,511	0/0:20,0:20:36.34:0,36,474	0/0:16,0:16:45.02:0,45,412	0/0:17,0:16:45.02:0,45,411	0/0:13,0:13:36:0,36,324	0/0:4,0:4:12.01:0,12,109	0/0:13,0:13:11.73:0,12,197	0/0:7,0:7:17.96:0,18,152	0/0:22,0:21:54.02:0,54,494	0/0:19,0:19:48.01:0,48,434	0/0:18,0:18:24.48:0,24,380	0/0:24,1:22:22.41:0,22,459
chr10	100926036	.	TG	T	240.76	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=4.657;DP=442;FS=8.504;HRun=6;HaplotypeScore=40.3467;InbreedingCoeff=0.8465;MQ=52.75;MQ0=30;MQRankSum=-5.577;QD=18.52;ReadPosRankSum=0.069;VQSLOD=2.2518;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:99:0,99,1287	1/1:0,3:3:9.02:97,9,0	./.	0/0:12,0:1:2.98:0,3,21	0/0:5,0:5:15.05:0,15,194	0/0:18,0:18:54.18:0,54,708	0/0:28,1:28:69.16:0,69,860	0/0:28,0:15:42.14:0,42,551	0/0:10,0:10:24.08:0,24,315	0/0:13,0:12:33.11:0,33,428	0/0:11,0:11:30.10:0,30,393	0/0:16,1:17:13.04:0,13,520	0/0:20,0:20:60.17:0,60,750	0/0:21,0:21:57.16:0,57,721	1/1:0,10:10:24.06:257,24,0	0/0:8,0:8:24.08:0,24,315	0/0:29,0:29:81.22:0,81,1031	0/0:29,0:28:77.95:0,78,975	0/0:17,0:12:33.10:0,33,420	0/0:9,0:9:27.09:0,27,347	0/0:26,0:25:66.21:0,66,868	0/0:6,0:6:18.06:0,18,236	0/0:8,0:8:21.03:0,21,257	0/0:21,0:21:57.19:0,57,749	0/0:13,0:13:36.11:0,36,461	0/0:14,0:14:39.13:0,39,513	0/0:11,0:10:33.11:0,33,433	0/0:4,0:4:12.04:0,12,158
chr10	100926792	.	AG	A	927.54	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.707;DP=623;FS=1.708;HRun=1;HaplotypeScore=67.0172;InbreedingCoeff=0.9966;MQ=64.68;MQ0=0;MQRankSum=-0.712;QD=37.10;ReadPosRankSum=3.182;VQSLOD=4.2070;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1558	1/1:0,7:7:21.07:293,21,0	0/0:17,0:15:45.08:0,45,640	0/0:22,0:21:54.17:0,54,850	0/0:20,0:20:57.19:0,57,906	0/0:18,0:18:54.18:0,54,861	0/0:18,0:18:54.15:0,54,815	0/0:22,0:22:63.19:0,63,946	0/0:28,0:28:81.27:0,81,1280	0/0:25,0:25:75.25:0,75,1171	0/0:14,0:14:42.14:0,42,658	0/0:19,0:19:54.18:0,54,863	0/0:15,0:15:39.05:0,39,622	0/0:22,0:22:63.18:0,63,958	1/1:0,18:18:54.18:755,54,0	0/0:12,0:12:33.04:0,33,504	0/0:87,0:87:99:0,256,3857	0/0:28,0:28:81.17:0,81,1210	0/0:13,0:13:39.13:0,39,613	0/0:10,0:10:27.09:0,27,431	0/0:29,0:29:87.30:0,87,1374	0/0:13,0:13:39.10:0,39,574	0/0:9,0:9:27.08:0,27,397	0/0:19,0:19:57.18:0,57,865	0/0:15,0:15:45.14:0,45,696	0/0:37,0:37:99:0,111,1752	0/0:38,0:38:99:0,111,1763	0/0:14,0:14:42.14:0,42,671
chr10	100927312	.	AATATATATATATATATATATATATATATATATATAT	A	733.34	PASS	AC=4;AF=0.182;AN=22;BaseQRankSum=2.748;DP=175;FS=5.724;HRun=0;HaplotypeScore=153.9702;InbreedingCoeff=0.4637;MQ=56.84;MQ0=2;MQRankSum=-2.228;QD=61.11;ReadPosRankSum=2.525;VQSLOD=2.1701;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:9.03:0,9,245	./.	./.	./.	./.	./.	./.	0/0:13,0:13:21.07:0,21,1005	./.	./.	0/0:6,0:6:0:0,0,0	./.	./.	0/0:5,0:5:3.01:0,3,152	./.	./.	0/0:21,0:21:16.30:0,16,1019	0/0:7,0:7:9.03:0,9,906	0/0:4,0:4:3.01:0,3,409	0/0:3,0:3:3.01:0,3,46	./.	./.	1/1:8,3:11:5.88:545,6,0	1/1:0,1:1:3.01:273,3,0	./.	./.	./.	0/0:11,0:11:6.49:0,6,315
chr10	100928613	.	A	ATT	284.58	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=1.994;DP=527;FS=2.389;HRun=9;HaplotypeScore=85.3066;InbreedingCoeff=0.7174;MQ=76.32;MQ0=0;MQRankSum=-1.383;QD=7.69;ReadPosRankSum=-0.420;VQSLOD=0.3122;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,11:15:26.58:378,27,0	0/0:13,0:13:39.07:0,39,405	0/1:22,0:21:2.26:2,0,312	0/0:8,0:7:11.85:0,12,125	0/0:29,0:29:78.17:0,78,822	0/0:15,0:15:42.10:0,42,447	0/0:8,0:8:21.04:0,21,223	0/0:36,0:36:93.23:0,93,989	0/0:22,0:22:60.11:0,60,630	0/0:25,0:25:60.11:0,60,632	0/0:33,0:33:96.22:0,96,1014	0/0:9,0:9:21.03:0,21,216	0/0:17,0:17:45.11:0,45,479	0/0:9,0:9:27.07:0,27,287	0/0:21,0:21:60.11:0,60,622	0/0:15,0:15:39.09:0,39,415	0/0:21,0:21:54.10:0,54,563	0/0:15,0:15:36.08:0,36,383	0/0:15,0:15:36.05:0,36,368	0/0:31,0:31:84.36:0,84,913	0/0:12,0:12:30.07:0,30,319	0/0:14,0:14:39.10:0,39,415	0/0:23,0:23:63.12:0,63,653	0/0:9,0:9:18.02:0,18,192	0/0:21,0:21:51.10:0,51,542	0/0:29,0:29:67.36:0,67,753	0/0:32,0:32:87.20:0,87,918	0/0:7,0:7:21.05:0,21,224
chr10	100928772	.	G	GA	660.92	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.423;DP=559;FS=0.000;HRun=8;HaplotypeScore=58.9188;InbreedingCoeff=0.9529;MQ=77.77;MQ0=1;MQRankSum=-0.301;QD=21.32;ReadPosRankSum=-0.354;VQSLOD=3.4634;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.02:0,42,384	1/1:2,6:8:21.02:227,21,0	0/0:15,0:16:11.90:0,12,169	0/0:12,0:12:9.23:0,9,134	0/0:25,0:25:69:0,69,621	0/0:22,0:22:60.02:0,60,545	0/0:17,0:17:48.02:0,48,439	0/0:26,0:26:66:0,66,595	0/0:22,0:22:51.02:0,51,467	0/0:23,0:23:69.04:0,69,632	0/0:20,0:20:51.02:0,51,467	0/0:18,0:18:42.02:0,42,384	0/0:19,0:20:56.06:0,56,500	0/0:13,0:13:36.01:0,36,329	1/1:4,19:23:48.06:554,48,0	0/0:31,0:31:87.03:0,87,793	0/0:21,0:21:63.03:0,63,577	0/0:12,0:12:32.97:0,33,294	0/0:12,0:12:35.97:0,36,317	0/0:29,0:29:69.03:0,69,632	0/0:17,0:17:41.99:0,42,378	0/0:17,0:17:42.02:0,42,384	0/0:31,0:31:81.02:0,81,736	0/0:15,0:15:45.02:0,45,412	0/0:9,0:10:23.02:0,23,193	0/0:23,0:22:60.02:0,60,546	0/0:41,0:41:99:0,117,1066	0/0:19,0:19:45.02:0,45,412
chr10	100929150	.	G	GT	727.49	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.419;DP=518;FS=0.000;HRun=6;HaplotypeScore=64.2076;InbreedingCoeff=0.9966;MQ=81.35;MQ0=0;MQRankSum=-2.795;QD=30.31;ReadPosRankSum=-0.482;VQSLOD=3.9419;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.10:0,60,602	1/1:1,9:10:30.08:360,30,0	0/0:16,0:16:42.02:0,42,394	0/0:12,0:12:23.61:0,24,240	0/0:27,0:27:72.14:0,72,727	0/0:21,0:21:54.10:0,54,543	0/0:9,0:9:27.02:0,27,255	0/0:37,0:37:84.15:0,84,840	0/0:9,0:9:27.04:0,27,267	0/0:19,0:19:54.12:0,54,550	0/0:20,0:20:57.13:0,57,581	0/0:13,0:13:33.05:0,33,328	0/0:19,0:19:54.12:0,54,551	0/0:10,0:10:30.07:0,30,305	1/1:3,11:14:39.12:489,39,0	0/0:21,0:21:54.12:0,54,551	0/0:17,0:17:39.06:0,39,389	0/0:23,0:23:61.28:0,61,622	0/0:22,0:22:57.12:0,57,575	0/0:20,0:20:48.03:0,48,471	0/0:10,0:10:30.07:0,30,306	0/0:22,0:22:60.13:0,60,612	0/0:22,0:22:45.10:0,45,459	0/0:13,0:13:33.08:0,33,337	0/0:16,0:16:42.09:0,42,428	0/0:22,0:22:57.13:0,57,581	0/0:29,0:29:87.13:0,87,857	0/0:22,0:22:66.15:0,66,672
chr10	100929196	.	A	AT	7340.16	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-11.373;DP=522;FS=5.364;HRun=9;HaplotypeScore=52.3326;InbreedingCoeff=0.9925;MQ=77.79;MQ0=0;MQRankSum=0.495;QD=25.85;ReadPosRankSum=-0.533;VQSLOD=5.3245;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,7:12:18.05:199,18,0	1/1:1,12:13:36.10:396,36,0	0/0:14,0:14:27.85:0,28,236	0/0:11,0:11:16.53:0,17,153	0/0:25,0:25:71.97:0,72,624	0/0:20,0:20:56.98:0,57,495	0/0:14,0:14:35.99:0,36,312	1/1:7,28:35:64.76:885,65,0	0/0:16,0:16:44.99:0,45,391	0/0:26,0:26:71.89:0,72,613	0/0:24,0:24:65.98:0,66,573	1/1:0,13:13:36.10:398,36,0	0/0:14,0:15:37.99:0,38,314	0/0:14,0:14:41.99:0,42,364	1/1:0,18:18:51.14:564,51,0	1/1:3,19:22:28.09:538,28,0	0/0:17,0:17:44.98:0,45,391	0/0:25,0:25:71.97:0,72,625	1/1:4,13:17:39.09:423,39,0	1/1:4,19:23:54.15:597,54,0	1/1:0,9:9:27.07:299,27,0	1/1:2,15:17:39.11:431,39,0	1/1:2,21:23:48.13:530,48,0	1/1:1,10:11:27.07:299,27,0	0/0:17,0:17:47.99:0,48,417	1/1:2,22:24:63.15:685,63,0	1/1:4,31:35:87.24:962,87,0	1/1:8,4:12:12.03:133,12,0
chr10	100931887	.	GAA	G	4160.75	PASS	AB=0.717;AC=27;AF=0.482;AN=56;BaseQRankSum=13.117;DP=561;FS=0.802;HRun=15;HaplotypeScore=89.9578;InbreedingCoeff=0.7525;MQ=48.76;MQ0=18;MQRankSum=-5.490;QD=15.35;ReadPosRankSum=4.841;VQSLOD=3.0602;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:64.75:0,65,836	1/1:5,12:16:29.79:264,30,0	0/0:5,0:1:2.74:0,3,12	0/0:17,0:3:2.97:0,3,20	0/0:35,0:36:77.13:0,77,872	0/0:15,1:15:25.92:0,26,285	0/0:22,0:20:37.77:0,38,401	0/1:16,12:25:8.30:231,0,8	0/0:6,0:7:17.48:0,17,169	0/0:26,0:26:44.43:0,44,520	0/0:22,0:22:28.81:0,29,449	1/1:5,10:15:32.98:290,33,0	0/1:13,1:15:8.82:9,0,152	0/0:19,0:22:37.70:0,38,391	1/1:5,22:26:68.93:607,69,0	1/1:4,10:13:23.89:211,24,0	0/0:29,1:31:36.64:0,37,714	0/0:21,0:23:55.63:0,56,658	1/1:2,18:19:44.62:395,45,0	1/1:8,11:16:32.84:290,33,0	1/1:3,9:11:20.97:185,21,0	1/1:4,8:12:23.90:211,24,0	1/1:6,11:16:29.75:263,30,0	1/1:5,8:12:23.84:211,24,0	0/0:21,1:24:30.10:0,30,628	0/1:6,19:25:25.74:362,0,26	1/1:9,13:21:35.85:316,36,0	1/1:2,12:13:35.93:317,36,0
chr10	100931918	.	G	GA	1514.27	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.735;DP=652;FS=5.872;HRun=9;HaplotypeScore=107.8029;InbreedingCoeff=0.9879;MQ=62.59;MQ0=11;MQRankSum=-6.325;QD=13.77;ReadPosRankSum=2.660;VQSLOD=3.4919;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:83.87:0,84,721	1/1:1,0:15:31.38:162,31,0	0/0:24,0:16:25.75:0,26,287	0/0:42,0:18:13.84:0,14,218	0/0:36,1:37:56.79:0,57,722	0/0:17,0:17:38.98:0,39,338	0/0:23,0:21:44.88:0,45,390	0/0:34,0:33:64.06:0,64,589	0/0:14,0:14:29.95:0,30,255	0/0:18,0:18:35.97:0,36,309	0/0:21,0:21:41.91:0,42,364	1/1:4,17:22:27.92:519,28,0	0/0:10,0:10:14.95:0,15,130	0/0:23,0:22:29.64:0,30,260	1/1:6,0:27:45.43:237,45,0	0/0:16,0:15:32.98:0,33,286	0/0:26,0:26:53.96:0,54,468	0/0:25,0:24:47.90:0,48,412	0/0:28,1:27:59.98:0,60,521	0/0:23,1:23:32.84:0,33,514	0/0:23,0:22:59.98:0,60,521	1/1:5,8:13:24.06:265,24,0	1/1:2,15:17:35.89:366,36,0	1/1:5,10:13:15:152,15,0	0/0:27,0:27:61.98:0,62,523	0/0:25,0:25:71.92:0,72,613	0/0:21,0:20:50.97:0,51,438	0/0:21,0:21:56.98:0,57,495
chr10	100932473	.	A	AT	3679.68	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.811;DP=757;FS=4.348;HRun=4;HaplotypeScore=80.7813;InbreedingCoeff=0.9998;MQ=89.60;MQ0=0;MQRankSum=-2.998;QD=35.04;ReadPosRankSum=2.574;VQSLOD=4.2366;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,162,1824	0/0:11,0:11:33.09:0,33,374	0/0:29,0:29:78.20:0,78,868	0/0:32,0:31:71.96:0,72,803	0/0:31,0:31:90.26:0,90,1021	0/0:20,0:19:60.10:0,60,646	0/0:28,0:28:69.18:0,69,772	0/0:29,0:29:75.18:0,75,827	0/0:28,0:28:72.17:0,72,795	0/0:27,0:27:75.21:0,75,850	0/0:25,0:25:66.19:0,66,748	1/1:2,29:31:78.25:1053,78,0	0/0:22,0:22:57.16:0,57,646	0/0:28,0:28:81.23:0,81,918	0/0:29,0:29:78.22:0,78,884	0/0:24,0:24:72.19:0,72,806	0/0:43,0:43:99:0,123,1369	0/0:19,0:19:51.13:0,51,568	0/0:23,0:23:60.16:0,60,672	0/0:29,0:29:87.25:0,87,987	0/0:19,0:19:54.15:0,54,613	1/1:3,26:29:78.26:1067,78,0	1/1:1,16:17:45.15:615,45,0	1/1:0,28:28:69.23:944,69,0	0/0:23,0:23:66.18:0,66,740	0/0:30,0:30:84.24:0,84,952	0/0:33,0:33:99:0,99,1123	0/0:12,0:12:30.07:0,30,330
chr10	100933427	.	GT	G	641.33	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.666;DP=712;FS=3.645;HRun=3;HaplotypeScore=150.2468;InbreedingCoeff=0.9789;MQ=66.22;MQ0=4;MQRankSum=-0.820;QD=6.82;ReadPosRankSum=0.882;VQSLOD=0.7274;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:42:99:0,106,1425	0/0:9,0:9:12.97:0,13,132	0/0:38,1:29:69.12:0,69,910	0/0:54,1:35:59.91:0,60,967	0/0:17,0:17:45.15:0,45,648	0/0:16,0:16:45.14:0,45,628	0/0:29,0:29:84.25:0,84,1154	0/0:34,0:34:99:0,101,939	0/0:24,0:24:66.21:0,66,932	0/0:20,0:20:57.19:0,57,821	0/0:20,0:20:57.19:0,57,818	1/1:23,0:23:45.88:212,46,0	0/0:30,0:30:84.22:0,84,1118	0/0:33,0:33:93.24:0,93,1312	0/0:32,0:32:75.01:0,75,752	0/0:22,0:22:53.32:0,53,371	0/0:20,0:20:60.18:0,60,828	0/0:19,0:19:57.12:0,57,751	0/0:21,0:20:56.73:0,57,576	0/0:20,0:20:53.38:0,53,337	0/0:46,0:46:79.92:0,80,531	1/1:18,0:18:27.29:158,27,0	1/1:12,1:13:9.90:134,10,0	1/1:35,5:38:63.34:294,63,0	0/0:24,0:24:72.14:0,72,939	0/0:18,0:18:50.35:0,50,411	0/0:18,0:18:41.31:0,41,265	0/0:10,0:10:29.56:0,30,189
chr10	100933429	.	T	TC	2474.28	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=8.450;DP=714;FS=4.611;HRun=0;HaplotypeScore=145.0903;InbreedingCoeff=0.7583;MQ=65.18;MQ0=5;MQRankSum=0.051;QD=16.95;ReadPosRankSum=-1.120;VQSLOD=5.3750;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,115,1478	0/1:8,0:8:9.74:10,0,89	0/0:41,0:27:69.59:0,70,936	0/0:55,0:34:76.50:0,76,967	0/0:16,0:16:45.15:0,45,629	0/0:17,0:17:45.14:0,45,614	0/0:30,0:30:87.27:0,87,1194	0/0:36,0:36:55.13:0,55,740	0/0:22,0:22:66.21:0,66,906	0/0:21,0:21:57.19:0,57,797	0/0:20,0:20:57.19:0,57,797	1/1:7,17:24:59.91:753,60,0	0/0:29,0:29:87.24:0,87,1146	0/0:33,0:33:93.31:0,93,1291	0/0:32,0:32:58.44:0,58,655	0/0:22,0:22:50.71:0,51,284	0/0:20,0:20:60.13:0,60,798	0/0:20,0:20:57.15:0,57,752	0/0:22,0:21:55.43:0,55,509	0/0:19,0:19:9.59:0,10,217	0/1:45,0:45:16.33:16,0,326	1/1:2,15:17:48.06:601,48,0	1/1:5,7:12:32.90:337,33,0	1/1:11,29:38:74.52:924,75,0	0/0:27,0:27:77.24:0,77,973	0/0:17,0:17:43.13:0,43,324	0/0:17,0:17:38.81:0,39,181	0/0:10,0:10:28.35:0,28,141
chr10	100933430	.	T	TCC	10372.10	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=13.137;DP=723;FS=22.606;HRun=3;HaplotypeScore=134.5317;InbreedingCoeff=0.9950;MQ=64.67;MQ0=6;MQRankSum=-2.122;QD=31.72;ReadPosRankSum=1.534;VQSLOD=3.4575;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,105,1393	1/1:8,0:8:18.05:206,18,0	0/0:42,0:27:53.13:0,53,717	0/0:57,0:34:80.64:0,81,892	0/0:18,0:18:45.13:0,45,612	0/0:17,0:17:45.11:0,45,577	0/0:30,0:30:78.20:0,78,1007	1/1:3,33:36:89.24:1484,89,0	0/0:22,0:22:66.18:0,66,871	0/0:21,0:21:57.14:0,57,681	0/0:20,0:20:57.15:0,57,746	1/1:25,0:25:65.71:645,66,0	0/0:28,0:28:72.20:0,72,952	0/0:31,0:31:90.21:0,90,1139	1/1:32,0:32:72.21:842,72,0	1/1:4,19:23:28.39:886,28,0	0/0:19,0:19:57.08:0,57,751	0/0:20,0:20:57.14:0,57,754	1/1:9,13:21:12.81:472,13,0	1/1:2,18:20:51.03:819,51,0	1/1:3,42:46:72.16:1417,72,0	1/1:16,0:16:45.01:426,45,0	1/1:12,0:12:26.64:225,27,0	1/1:40,0:38:77.73:760,78,0	0/0:27,0:27:78.22:0,78,1042	1/1:2,17:20:59.96:884,60,0	1/1:0,16:17:42.14:759,42,0	1/1:0,10:10:30.10:550,30,0
chr10	100933432	.	C	CCCCT	6369.34	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=13.826;DP=719;FS=25.808;HRun=0;HaplotypeScore=175.5093;InbreedingCoeff=0.8395;MQ=64.32;MQ0=6;MQRankSum=-3.136;QD=19.54;ReadPosRankSum=2.651;VQSLOD=2.8622;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,111,2002	1/1:2,8:10:24.08:651,24,0	0/0:41,0:27:43.51:0,44,915	0/0:58,0:34:83.35:0,83,1119	0/0:18,0:18:53.50:0,53,891	0/0:17,0:17:45.12:0,45,803	0/0:27,0:27:78.20:0,78,1360	1/1:36,0:36:68.44:654,68,0	0/0:22,0:22:66.19:0,66,1191	0/0:22,0:22:63.15:0,63,903	0/0:20,0:20:60.15:0,60,1041	1/1:25,0:25:56.11:313,56,0	0/0:26,0:26:75.20:0,75,1329	0/0:31,0:31:90.21:0,90,1516	1/1:1,31:32:75.26:2091,75,0	0/1:22,0:22:1.87:304,0,2	0/0:20,0:20:57.08:0,57,1037	0/0:20,0:20:60.17:0,60,1089	0/1:20,0:19:53.76:203,0,54	1/1:19,0:19:51.58:340,52,0	1/1:45,0:45:58.02:506,58,0	1/1:16,0:16:25.11:121,25,0	0/1:12,0:12:2.02:118,0,2	1/1:40,0:38:60.39:275,60,0	0/0:27,0:27:78.25:0,78,1459	1/1:21,0:21:35.96:321,36,0	1/1:18,0:18:24.29:293,24,0	1/1:10,0:10:29.42:178,29,0
chr10	100933504	.	TCTC	T	3196.79	PASS	AB=0.819;AC=18;AF=0.321;AN=56;BaseQRankSum=14.214;DP=651;FS=10.321;HRun=0;HaplotypeScore=179.4704;InbreedingCoeff=0.5872;MQ=59.78;MQ0=2;MQRankSum=-12.679;QD=16.74;ReadPosRankSum=-0.179;VQSLOD=2.6183;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:18.48:0,18,1278	1/1:3,4:7:2.62:142,3,0	0/0:24,0:16:36.71:0,37,628	0/0:39,0:20:34.84:0,35,681	0/0:18,0:18:54.19:0,54,1237	0/0:25,0:25:45.27:0,45,1503	0/0:29,0:29:87.30:0,87,2007	1/1:21,4:25:0.48:286,0,0	0/0:24,0:24:72.22:0,72,1590	0/0:31,0:31:90.30:0,90,2119	0/0:21,0:21:63.18:0,63,1381	0/0:22,0:22:60.57:0,61,1141	0/0:36,0:36:99:0,108,2434	0/0:29,0:29:87.30:0,87,2013	1/1:4,14:18:31.49:463,31,0	1/1:11,17:28:30.88:591,31,0	0/0:31,0:31:89.77:0,90,1894	0/0:23,0:23:68.54:0,69,1349	0/1:6,5:11:12.71:167,0,13	1/1:9,19:28:36.70:597,37,0	0/1:9,1:10:53.47:53,0,55	0/1:14,0:17:88.03:88,0,438	0/0:20,0:20:43.40:0,43,967	0/0:27,0:27:37.42:0,37,1266	0/0:31,0:31:93.28:0,93,1997	0/1:11,10:21:73.72:358,0,74	1/1:6,17:23:24.04:534,24,0	1/1:0,3:3:9.03:106,9,0
chr10	100933506	.	T	TCTTC	3607.91	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=-0.233;DP=654;FS=3.502;HRun=0;HaplotypeScore=193.7722;InbreedingCoeff=0.8898;MQ=57.34;MQ0=2;MQRankSum=-0.504;QD=31.37;ReadPosRankSum=-1.871;VQSLOD=2.8475;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:44.71:386,45,0	0/0:7,0:7:12:0,12,106	./.	0/0:38,0:18:1.38:0,1,22	0/0:20,0:20:42.08:0,42,628	0/0:25,0:25:48.04:0,48,711	0/0:30,0:30:54.16:0,54,818	0/0:23,0:23:25.66:0,26,153	0/0:23,0:23:57.11:0,57,766	0/0:32,0:32:69.19:0,69,1010	0/0:23,0:23:48.13:0,48,705	1/1:14,8:22:48.14:1005,48,0	0/0:39,0:39:87.22:0,87,1281	0/0:30,0:30:69.15:0,69,949	0/0:18,0:18:40.01:0,40,339	0/0:28,0:28:51.32:0,51,432	0/0:32,0:32:56.74:0,57,799	0/0:24,0:24:46.83:0,47,647	0/0:11,0:11:15.01:0,15,138	0/0:28,0:28:60.30:0,60,513	0/0:10,0:10:2.88:0,3,22	1/1:11,0:17:37.27:515,37,0	1/1:11,9:20:51.07:973,51,0	1/1:20,7:27:48.10:729,48,0	0/0:29,0:29:48.11:0,48,720	0/0:20,0:20:32.62:0,33,300	0/0:23,0:23:51.95:0,52,462	0/0:3,0:3:9.01:0,9,84
chr10	100933509	.	TCCTTC	T	3651.19	PASS	AB=0.709;AC=14;AF=0.250;AN=56;BaseQRankSum=13.787;DP=641;FS=1.259;HRun=0;HaplotypeScore=194.7066;InbreedingCoeff=0.3637;MQ=55.87;MQ0=2;MQRankSum=-13.429;QD=22.00;ReadPosRankSum=4.271;VQSLOD=3.2243;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.16:0,81,1664	0/1:2,4:6:8.94:153,0,9	0/0:16,0:10:24.08:0,24,383	0/0:38,0:17:33.69:0,34,466	0/0:22,0:22:66.06:0,66,1748	0/0:24,0:24:60.77:0,61,1803	0/0:31,0:31:93.31:0,93,2462	0/1:18,4:23:66.44:198,0,66	0/0:22,0:22:66.23:0,66,1818	0/0:30,0:30:87.28:0,87,2432	0/0:23,0:23:69.24:0,69,2056	0/0:21,0:22:66.23:0,66,1578	0/0:38,0:38:99:0,114,3237	0/0:30,0:30:84.26:0,84,2346	1/1:1,14:17:23.28:579,23,0	0/1:8,17:26:43.68:597,0,44	0/0:30,0:30:85.12:0,85,2190	0/0:25,0:25:61.94:0,62,1625	0/1:6,5:11:38.40:212,0,38	1/1:9,19:28:11.06:760,11,0	0/1:8,1:9:18.49:18,0,110	0/0:18,0:18:54.17:0,54,1117	0/0:22,0:22:63.22:0,63,1632	0/0:27,0:27:73.80:0,74,1700	0/0:29,0:29:87.19:0,87,2079	0/1:9,10:19:99:352,0,162	1/1:7,17:24:0.97:652,1,0	1/1:0,3:3:9.03:129,9,0
chr10	100933512	.	TTC	T	485.06	PASS	AB=0.980;AC=10;AF=0.179;AN=56;BaseQRankSum=15.134;DP=661;FS=1.291;HRun=0;HaplotypeScore=171.9095;InbreedingCoeff=0.0187;MQ=54.54;MQ0=2;MQRankSum=-13.072;QD=2.80;ReadPosRankSum=4.179;VQSLOD=2.7482;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.08:0,84,1438	0/1:9,0:9:18.80:19,0,59	0/0:17,0:10:24.04:0,24,364	0/0:35,0:15:23.21:0,23,429	0/0:23,0:23:69.13:0,69,1252	0/0:25,0:25:49.51:0,50,1299	0/0:32,0:32:96.31:0,96,1790	0/1:25,1:26:17.61:18,0,205	0/0:23,0:23:69.24:0,69,1332	0/0:31,0:31:93.32:0,93,1754	0/0:23,0:23:69.23:0,69,1350	0/0:24,0:24:72.20:0,72,1076	0/0:38,0:38:99:0,114,2194	0/0:27,0:27:81.28:0,81,1605	0/1:19,2:21:9.30:123,0,9	0/1:25,1:26:99:108,0,104	0/0:31,0:31:90.24:0,90,1581	0/0:24,0:24:56.05:0,56,1167	0/1:12,0:12:26.73:27,0,104	0/1:32,0:32:63.40:127,0,63	0/0:10,0:10:16.31:0,16,195	0/0:18,0:18:54.17:0,54,907	0/0:23,0:23:66.22:0,66,1108	0/0:25,1:26:55.32:0,55,1257	0/0:30,0:30:87.30:0,87,1580	0/1:19,0:19:59.14:59,0,162	0/1:25,0:25:31.35:120,0,31	1/1:3,0:3:7.79:31,8,0
chr10	100933561	.	CT	C	2031.44	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.971;DP=653;FS=1.508;HRun=7;HaplotypeScore=111.9744;InbreedingCoeff=0.9569;MQ=68.56;MQ0=1;MQRankSum=-0.327;QD=23.35;ReadPosRankSum=2.394;VQSLOD=3.0993;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:36.12:0,36,453	0/0:12,0:12:33.09:0,33,402	0/0:21,0:20:45.39:0,45,580	0/0:16,0:14:6.30:0,6,263	0/0:21,0:21:48.15:0,48,592	0/0:20,0:20:57.17:0,57,706	0/0:25,0:25:66.19:0,66,806	0/0:34,0:34:78.20:0,78,943	0/0:26,0:26:66.18:0,66,804	0/0:25,0:25:66.20:0,66,818	0/0:23,0:23:63.20:0,63,787	1/1:3,19:22:57.13:581,57,0	0/0:37,0:37:96.27:0,96,1180	0/0:28,0:28:84.27:0,84,1056	0/0:41,0:41:99:0,114,1429	0/0:23,0:23:63.16:0,63,774	0/0:27,0:27:60.17:0,60,739	0/0:20,0:20:54.12:0,54,648	0/0:21,0:21:57.14:0,57,699	0/0:37,0:37:99:0,105,1258	0/0:4,0:4:9:0,9,87	1/1:2,21:23:63.14:641,63,0	1/1:3,22:25:63.11:633,63,0	1/1:2,15:16:33.07:336,33,0	0/0:26,0:26:72.23:0,72,906	0/0:23,0:23:66.20:0,66,820	0/0:33,0:33:96.16:0,96,1134	0/0:9,0:9:27.09:0,27,340
chr10	100935086	.	G	GAA	968.68	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.441;DP=641;FS=5.825;HRun=0;HaplotypeScore=150.9048;InbreedingCoeff=0.9538;MQ=77.44;MQ0=7;MQRankSum=-5.670;QD=11.53;ReadPosRankSum=-7.616;VQSLOD=1.1227;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:44.84:0,45,515	0/0:6,0:6:8.80:0,9,132	0/0:30,0:21:55.97:0,56,752	0/0:55,0:37:80.57:0,81,1209	0/0:24,0:24:69.19:0,69,1025	0/0:27,0:26:81.22:0,81,1220	0/0:16,0:16:42.02:0,42,577	0/0:29,0:29:75.16:0,75,682	0/0:22,0:22:66.21:0,66,1047	0/0:33,0:33:77.88:0,78,1196	0/0:21,0:21:57.16:0,57,849	1/1:17,0:16:41.69:300,42,0	0/0:28,0:28:78.23:0,78,1189	0/0:24,0:23:69.21:0,69,1066	0/0:25,0:24:55.37:0,55,715	0/0:19,0:19:40.88:0,41,415	0/0:37,0:37:99:0,105,1647	0/0:29,0:29:83.45:0,83,1252	0/0:11,0:11:24:0,24,259	0/0:10,0:10:14.97:0,15,124	0/0:16,0:14:14.80:0,15,128	1/1:6,24:30:38.40:247,38,0	1/1:19,1:19:47.31:323,47,0	1/1:17,0:16:35.64:258,36,0	0/0:19,0:19:45.15:0,45,731	0/0:22,0:21:43.57:0,44,601	0/0:28,0:28:72.63:0,73,819	0/0:7,0:7:7.77:0,8,176
chr10	100935095	.	GAC	G	791.62	PASS	AB=0.946;AC=22;AF=0.393;AN=56;BaseQRankSum=11.096;DP=646;FS=11.479;HRun=0;HaplotypeScore=140.5951;InbreedingCoeff=0.6408;MQ=69.69;MQ0=10;MQRankSum=-5.919;QD=3.14;ReadPosRankSum=-4.782;VQSLOD=0.0886;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,1:20:24.51:0,25,156	0/0:9,0:9:5.19:0,5,41	0/0:25,0:16:43.64:0,44,667	0/0:51,0:33:72.79:0,73,815	0/0:22,0:22:63.14:0,63,1059	0/0:26,0:25:78.20:0,78,1335	0/0:15,0:14:33.07:0,33,521	1/1:14,20:34:50.37:371,50,0	0/0:22,0:22:63.16:0,63,1088	0/0:35,0:35:73.32:0,73,1591	0/0:21,0:21:51.15:0,51,889	1/1:11,6:16:15.78:147,16,0	0/0:26,0:26:72.22:0,72,1284	0/0:26,0:25:69.15:0,69,1151	0/1:29,0:28:25.76:26,0,228	1/1:19,0:19:6.05:34,6,0	0/0:38,0:38:99:0,111,1904	0/0:30,0:30:83.49:0,83,1357	1/1:11,0:10:17.15:102,17,0	1/1:10,0:10:0.89:2,1,0	1/1:13,1:12:0.47:1,0,0	0/1:16,6:22:0:0,0,0	1/1:14,5:18:2.79:25,3,0	1/1:15,1:15:8.98:73,9,0	0/0:28,0:27:45.02:0,45,825	0/1:22,0:21:40.57:97,0,41	1/1:29,1:29:17.77:92,18,0	0/1:9,0:8:2.40:2,0,9
chr10	100935103	.	GAC	G	333.29	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=8.666;DP=624;FS=16.159;HRun=0;HaplotypeScore=133.6406;InbreedingCoeff=0.4853;MQ=59.61;MQ0=13;MQRankSum=-8.579;QD=1.28;ReadPosRankSum=-1.804;VQSLOD=1.4715;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:24.65:0,25,171	0/0:9,0:9:5.99:0,6,50	0/1:22,0:13:20.76:21,0,189	0/1:41,0:23:0.57:1,0,156	0/0:24,0:24:53.97:0,54,689	0/0:27,0:26:65:0,65,905	0/0:15,0:14:20.91:0,21,378	1/1:34,0:33:9.54:174,10,0	0/0:20,0:20:54.02:0,54,744	0/0:36,0:36:59.51:0,60,1236	0/0:19,0:19:42.43:0,42,440	1/1:16,0:14:11.89:119,12,0	0/0:26,0:26:71.34:0,71,958	0/0:22,0:21:59.99:0,60,878	0/0:27,2:28:38.89:0,39,334	1/1:19,0:19:1.46:4,1,0	0/0:41,0:41:96.01:0,96,1399	0/0:30,0:30:39.37:0,39,1168	0/1:10,0:8:4.77:5,0,17	0/1:11,0:11:0:0,0,0	0/1:15,0:13:0:0,0,0	0/0:16,1:17:0:0,0,0	1/1:16,1:16:2.79:24,3,0	1/1:14,0:13:5.99:48,6,0	0/0:30,0:29:38.90:0,39,390	0/1:21,0:20:43.61:49,0,44	1/1:29,0:28:10.97:34,11,0	0/1:11,0:9:4.55:14,0,5
chr10	100935105	.	C	CAG	263.10	PASS	AB=1.000;AC=21;AF=0.420;AN=50;BaseQRankSum=6.276;DP=629;FS=15.561;HRun=0;HaplotypeScore=142.1484;InbreedingCoeff=0.6036;MQ=58.16;MQ0=15;MQRankSum=-5.940;QD=1.02;ReadPosRankSum=-1.689;VQSLOD=1.6510;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:2.68:0,3,11	0/1:9,0:9:0.21:0,0,1	./.	./.	0/0:23,0:23:27.08:0,27,307	0/0:25,0:27:38.57:0,39,383	0/0:13,0:15:17.88:0,18,185	1/1:31,0:30:14.56:50,15,0	0/0:19,0:19:30.08:0,30,341	0/0:31,1:36:12.60:0,13,544	0/0:18,0:18:9.03:0,9,103	0/1:16,0:14:0.80:1,0,3	0/0:26,0:27:39.11:0,39,443	0/0:21,0:21:36.09:0,36,398	1/1:30,0:29:0.38:1,0,0	1/1:18,0:18:3.87:19,4,0	0/0:40,0:41:58.81:0,59,655	0/0:31,0:32:37.22:0,37,645	1/1:10,0:7:2.27:11,2,0	./.	0/1:17,0:15:0:0,0,0	0/1:17,0:17:0:0,0,0	0/0:16,0:15:0:0,0,0	0/1:18,0:17:1.35:1,0,7	1/1:19,11:28:6.86:239,7,0	1/1:22,0:21:7.59:17,8,0	1/1:29,0:28:3.33:50,3,0	1/1:11,0:9:4.78:15,5,0
chr10	100935211	.	G	GAC	40.26	PASS	AB=0.755;AC=5;AF=0.100;AN=50;BaseQRankSum=3.500;DP=495;FS=1.859;HRun=0;HaplotypeScore=88.0199;InbreedingCoeff=0.2772;MQ=52.01;MQ0=22;MQRankSum=-1.313;QD=1.06;ReadPosRankSum=-2.952;VQSLOD=1.0693;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:29:42.13:0,42,621	0/0:12,0:12:27.01:0,27,384	./.	0/0:41,0:4:3.01:0,3,41	0/0:31,0:31:78.19:0,78,1090	0/0:42,0:42:99:0,108,1605	0/0:24,0:22:45.13:0,45,646	0/0:11,0:9:16.13:0,16,89	0/0:16,0:16:48.15:0,48,713	0/0:24,0:24:66.20:0,66,952	0/0:18,0:18:54.15:0,54,772	0/1:7,2:8:35.90:73,0,36	0/0:27,0:27:65.98:0,66,946	0/0:20,0:19:54.18:0,54,816	0/0:27,0:26:57.18:0,57,850	0/0:7,0:6:8.99:0,9,74	0/0:38,0:37:93.30:0,93,1399	0/0:27,0:25:66.22:0,66,1005	0/0:3,0:2:2.92:0,3,17	./.	0/0:6,0:4:2.99:0,3,24	1/1:9,0:9:5.37:33,5,0	0/1:9,2:11:36.03:36,0,39	0/1:3,6:8:0.03:0,0,0	0/0:23,0:23:57.15:0,57,809	0/0:4,0:4:11.87:0,12,152	0/0:6,0:6:8.79:0,9,53	./.
chr10	100935229	.	CAG	C	243.14	PASS	AB=0.868;AC=16;AF=0.286;AN=56;BaseQRankSum=5.373;DP=624;FS=3.843;HRun=0;HaplotypeScore=113.3872;InbreedingCoeff=0.3054;MQ=57.50;MQ0=19;MQRankSum=0.250;QD=1.28;ReadPosRankSum=-2.191;VQSLOD=1.9279;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:28:32.37:0,32,272	0/1:11,1:12:3.32:3,0,397	0/0:45,0:17:9.63:0,10,288	0/0:67,0:14:14.12:0,14,158	0/0:28,2:30:23.83:0,24,850	0/0:42,0:42:62.94:0,63,1499	0/0:27,0:25:36.44:0,36,845	0/0:28,0:26:24.49:0,24,155	0/0:14,0:14:33.10:0,33,505	0/0:23,0:23:54.18:0,54,848	0/0:17,1:18:8.77:0,9,637	1/1:4,7:11:18.04:202,18,0	0/0:23,0:23:62.77:0,63,928	0/1:18,2:20:27.57:28,0,581	0/0:29,0:29:48.15:0,48,747	0/0:10,0:9:6.60:0,7,50	0/1:32,4:36:3.55:4,0,942	0/1:26,2:28:12.66:13,0,742	0/0:10,0:10:4.98:0,5,45	0/0:5,0:5:2.98:0,3,22	0/1:17,0:16:0:0,0,0	0/1:3,15:18:34.88:61,0,35	1/1:0,13:13:3.01:31,3,0	1/1:1,13:13:2.46:36,2,0	0/0:22,0:22:42.11:0,42,631	1/1:15,0:15:1.81:5,2,0	0/0:11,0:11:2.35:0,2,41	1/1:6,0:6:0.45:1,0,0
chr10	100936335	.	GGTGT	G	421.77	PASS	AB=0.980;AC=8;AF=0.148;AN=54;BaseQRankSum=4.005;DP=580;FS=1.680;HRun=0;HaplotypeScore=164.2410;InbreedingCoeff=0.2354;MQ=61.99;MQ0=7;MQRankSum=-1.816;QD=2.83;ReadPosRankSum=1.187;VQSLOD=2.2506;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,17:33:18.05:265,18,0	0/0:4,0:8:7.96:0,8,243	./.	0/0:30,0:21:2.98:0,3,22	0/0:14,1:17:24.21:0,24,465	0/0:24,0:21:36.45:0,36,722	0/0:27,0:28:38.85:0,39,763	0/0:22,0:21:16.38:0,16,124	0/0:33,0:33:51.55:0,52,1060	0/0:17,0:17:17.27:0,17,463	0/0:14,0:14:24.07:0,24,498	0/0:16,0:16:1.03:0,1,70	0/0:20,0:20:25.16:0,25,619	0/0:26,0:26:37.63:0,38,685	0/0:9,0:19:21.07:0,21,403	0/0:19,0:20:9.34:0,9,78	0/1:22,1:23:17.71:18,0,542	0/0:9,0:9:5.38:0,5,80	0/1:25,0:24:21.02:106,0,21	1/1:22,0:21:4.63:56,5,0	0/0:29,0:28:14.20:0,14,82	0/0:15,0:15:3.63:0,4,27	0/0:16,0:16:11.29:0,11,74	0/0:8,0:7:0.24:0,0,3	0/1:24,0:25:16.42:16,0,581	0/0:26,0:27:14.09:0,14,234	0/1:21,0:21:13.67:94,0,14	0/0:5,0:5:7.79:0,8,63
chr10	100936370	.	GTA	G	797.71	PASS	AB=0.988;AC=24;AF=0.462;AN=52;BaseQRankSum=9.516;DP=711;FS=25.096;HRun=0;HaplotypeScore=243.7751;InbreedingCoeff=-0.2686;MQ=37.40;MQ0=34;MQRankSum=-5.903;QD=1.55;ReadPosRankSum=-1.929;VQSLOD=1.1425;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:0.69:1,0,58	0/0:13,0:11:5.38:0,5,183	./.	./.	0/0:32,0:32:21.73:0,22,416	0/1:33,0:31:47.93:48,0,455	0/0:33,0:32:30.71:0,31,620	0/1:31,0:27:65.03:65,0,159	0/1:35,0:35:26.68:27,0,700	0/0:30,0:30:8.61:0,9,493	0/1:26,1:27:22.34:22,0,280	0/1:25,0:25:13.75:42,0,14	0/1:24,1:24:44.03:44,0,430	0/0:33,0:32:3.09:0,3,420	0/0:21,0:21:15.47:0,15,309	0/1:24,0:23:10.42:17,0,10	0/1:24,1:24:3.70:4,0,507	0/1:8,0:8:21.92:22,0,108	1/1:21,2:21:0.42:164,0,0	0/1:31,2:32:3.25:17,0,3	0/1:27,0:22:13.44:13,0,27	1/1:25,0:25:5.36:49,5,0	1/1:32,0:30:12.28:86,12,0	0/1:12,0:11:10.59:11,0,13	0/1:32,0:32:33.67:34,0,443	0/1:32,1:32:32.85:164,0,33	1/1:25,3:28:1.14:111,1,0	0/1:3,0:2:6.44:6,0,12
chr10	100936371	.	TATGA	T	2347.66	PASS	AB=1.000;AC=27;AF=0.519;AN=52;BaseQRankSum=9.826;DP=698;FS=24.136;HRun=0;HaplotypeScore=249.4262;InbreedingCoeff=0.2576;MQ=37.21;MQ0=36;MQRankSum=-8.672;QD=5.38;ReadPosRankSum=-2.823;VQSLOD=0.9759;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:37.95:38,0,119	0/1:12,0:10:2.61:3,0,331	./.	./.	0/0:32,0:32:17.23:0,17,713	0/1:32,0:31:34.78:35,0,567	0/0:32,1:32:45.49:0,45,1038	1/1:30,0:26:9.04:377,9,0	0/1:35,0:35:10.32:10,0,948	0/0:30,0:30:22.73:0,23,963	0/0:26,0:26:5.43:0,5,471	1/1:24,0:24:17.56:170,18,0	0/0:25,0:24:34.04:0,34,729	0/0:33,0:32:17.33:0,17,612	0/0:20,0:20:24.78:0,25,414	0/1:24,0:23:12.42:69,0,12	0/0:24,0:23:30.16:0,30,846	0/1:8,0:8:58.06:58,0,142	1/1:18,0:16:29.03:318,29,0	1/1:29,2:30:1.39:64,1,0	0/1:26,0:21:36.44:36,0,67	1/1:25,0:25:7.82:122,8,0	1/1:31,1:30:17.28:160,17,0	1/1:12,0:11:3.42:62,3,0	0/1:31,0:31:37.36:37,0,682	1/1:33,0:32:78.59:567,79,0	1/1:28,0:28:44.68:377,45,0	0/1:3,0:2:7.70:25,0,8
chr10	100936373	.	TGA	T	1778.14	PASS	AB=0.979;AC=30;AF=0.577;AN=52;BaseQRankSum=10.125;DP=659;FS=18.481;HRun=0;HaplotypeScore=228.4040;InbreedingCoeff=-0.0120;MQ=36.83;MQ0=35;MQRankSum=-8.541;QD=3.44;ReadPosRankSum=-1.938;VQSLOD=1.2063;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:29.53:0,30,366	0/1:11,0:10:9.32:9,0,272	./.	./.	0/1:34,0:34:1.08:1,0,479	0/1:32,0:32:69.30:69,0,334	0/0:31,0:30:22.29:0,22,717	1/1:24,3:23:30.88:383,31,0	0/1:33,0:33:27.69:28,0,600	0/1:25,0:25:50.23:50,0,858	0/1:26,0:26:42.78:43,0,321	1/1:23,0:23:1.96:65,2,0	0/1:26,0:25:2.77:3,0,600	0/1:33,0:32:0.54:1,0,425	0/0:19,0:19:11.52:0,12,366	0/1:16,8:23:7.28:69,0,7	0/0:22,0:21:24.47:0,24,698	0/1:8,0:8:15.87:16,0,163	1/1:15,0:12:26.71:216,27,0	1/1:26,2:27:5.75:41,6,0	0/1:21,1:17:12.80:13,0,101	1/1:25,0:25:5.36:48,5,0	1/1:30,0:28:10.47:74,10,0	0/1:12,0:11:6.05:37,0,6	0/1:29,0:29:40.16:40,0,435	1/1:22,6:27:34.29:413,34,0	1/1:17,6:23:33.14:310,33,0	0/1:3,0:2:10.12:13,0,10
chr10	100936382	.	G	GTA	1029.97	PASS	AB=0.890;AC=13;AF=0.241;AN=54;BaseQRankSum=6.032;DP=641;FS=27.644;HRun=0;HaplotypeScore=235.1357;InbreedingCoeff=0.3634;MQ=35.32;MQ0=43;MQRankSum=-7.023;QD=5.89;ReadPosRankSum=1.326;VQSLOD=1.8393;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:30.11:0,30,447	0/0:11,0:11:19.84:0,20,263	./.	0/0:30,0:2:5.94:0,6,41	0/0:34,0:34:39.90:0,40,475	0/0:29,0:29:40.23:0,40,423	0/0:30,0:29:51.38:0,51,679	0/1:29,1:25:99:102,0,162	0/0:33,0:33:55.78:0,56,631	0/0:24,0:24:67.13:0,67,860	0/0:23,0:23:32.78:0,33,381	0/1:21,1:22:47.20:57,0,47	0/0:28,0:27:71.29:0,71,748	0/0:31,0:30:46.89:0,47,523	0/0:19,0:19:23.57:0,24,294	0/1:15,4:18:15.34:15,0,24	0/0:20,0:19:47.96:0,48,622	0/0:9,0:9:16.25:0,16,169	1/1:9,3:9:16.26:265,16,0	1/1:15,3:18:1.54:12,2,0	0/1:12,9:16:15.05:15,0,82	0/0:22,1:22:2.87:0,3,24	0/0:26,1:25:3.37:0,3,26	0/0:10,0:9:3.94:0,4,17	0/0:29,0:29:44.62:0,45,486	1/1:22,6:27:45.49:591,45,0	0/1:21,0:21:5.06:94,0,5	1/1:3,0:2:5.82:37,6,0
chr10	100936384	.	G	GTA	70.29	PASS	AB=0.950;AC=6;AF=0.111;AN=54;BaseQRankSum=5.464;DP=642;FS=18.478;HRun=0;HaplotypeScore=247.5252;InbreedingCoeff=0.2590;MQ=35.37;MQ0=40;MQRankSum=-4.743;QD=0.75;ReadPosRankSum=-0.383;VQSLOD=0.5092;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:30.24:0,30,447	0/0:11,0:11:18.42:0,18,249	./.	0/0:30,0:2:5.96:0,6,43	0/0:34,0:34:35.84:0,36,445	0/0:29,0:29:36.67:0,37,390	0/0:31,0:30:45.52:0,46,658	0/0:30,0:25:30.86:0,31,255	0/0:35,0:35:49.32:0,49,587	0/0:24,0:24:59.55:0,60,812	0/0:24,0:24:29.25:0,29,344	0/1:19,3:22:33.22:70,0,33	0/0:29,0:28:67.12:0,67,723	0/0:29,0:30:43.60:0,44,496	0/0:19,0:19:21.51:0,22,279	0/0:20,0:19:11.64:0,12,70	0/0:20,0:19:46.24:0,46,606	0/0:9,0:9:13:0,13,149	1/1:10,0:7:2.92:54,3,0	0/0:17,0:17:2.45:0,2,9	0/0:20,0:16:3.69:0,4,87	0/1:21,2:22:0.29:0,0,0	0/0:23,4:25:2.27:0,2,9	0/1:10,0:9:2.40:2,0,3	0/0:29,0:29:39.57:0,40,444	0/1:29,0:28:45.58:46,0,139	0/0:21,0:21:14.98:0,15,67	0/0:3,0:2:4.43:0,4,19
chr10	100936393	.	TGA	T	865.02	PASS	AB=0.916;AC=21;AF=0.375;AN=56;BaseQRankSum=9.361;DP=567;FS=2.047;HRun=0;HaplotypeScore=185.8644;InbreedingCoeff=0.3365;MQ=34.41;MQ0=41;MQRankSum=-6.899;QD=4.10;ReadPosRankSum=0.805;VQSLOD=3.1092;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,1:22:25.99:0,26,364	0/0:10,0:11:11.13:0,11,299	0/0:35,0:2:5.98:0,6,78	0/0:37,0:3:8.49:0,8,90	0/0:25,0:26:27.45:0,27,451	0/1:23,0:26:12.14:12,0,255	0/0:24,0:23:36.03:0,36,536	0/1:10,3:9:16.01:180,0,16	0/0:31,0:31:25.18:0,25,497	0/0:20,0:20:56.84:0,57,959	0/0:20,0:23:20.37:0,20,286	1/1:22,0:22:9.27:58,9,0	0/0:26,0:26:30.08:0,30,766	0/0:26,1:28:1.07:0,1,407	0/0:17,0:17:14.95:0,15,192	0/1:17,1:17:15.69:67,0,16	0/0:18,0:18:33.51:0,34,567	0/1:9,0:9:17.28:17,0,173	1/1:11,1:9:4.02:83,4,0	1/1:13,1:14:2.76:17,3,0	0/0:15,0:12:6.02:0,6,115	1/1:20,0:19:0.04:1,0,0	1/1:24,0:22:1.69:4,2,0	1/1:10,0:9:3.21:28,3,0	0/0:22,0:22:5.65:0,6,396	0/1:22,2:23:52.28:311,0,52	1/1:14,2:16:22.34:245,22,0	1/1:3,0:2:0.47:1,0,0
chr10	100936407	.	T	TA	257.44	PASS	AB=0.843;AC=7;AF=0.125;AN=56;BaseQRankSum=4.085;DP=438;FS=2.328;HRun=0;HaplotypeScore=148.2394;InbreedingCoeff=0.1524;MQ=33.03;MQ0=27;MQRankSum=-2.954;QD=3.06;ReadPosRankSum=3.303;VQSLOD=3.3996;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:5.22:0,5,158	0/0:8,0:8:24.08:0,24,335	0/0:28,0:2:6.02:0,6,84	0/0:27,0:3:9.03:0,9,126	0/0:21,0:21:24.07:0,24,334	0/0:21,0:21:42.10:0,42,546	0/0:17,0:16:23.06:0,23,299	0/1:9,1:7:33.44:33,0,93	0/0:22,0:22:35.41:0,35,499	0/0:19,0:19:54.17:0,54,736	0/0:16,0:16:8.34:0,8,125	0/1:12,3:15:0.82:1,0,47	0/0:24,0:23:51.16:0,51,690	0/0:24,0:24:39.11:0,39,526	0/0:14,0:14:12.04:0,12,167	0/0:12,6:17:6.18:0,6,50	0/0:15,0:15:20.80:0,21,262	0/0:9,0:9:14.90:0,15,177	0/0:9,0:8:21.07:0,21,282	0/0:8,1:9:3.20:0,3,37	0/0:13,1:12:6.02:0,6,83	0/1:9,2:10:0:0,0,0	0/1:9,4:11:0:0,0,0	0/0:3,0:2:0:0,0,0	0/0:19,0:19:26.59:0,27,377	0/1:15,5:19:99:177,0,351	0/1:8,4:12:89.44:143,0,89	0/1:3,0:3:0:0,0,0
chr10	100936675	.	CA	C	5033.54	PASS	AB=0.520;AC=15;AF=0.268;AN=56;BaseQRankSum=11.752;DP=605;FS=26.880;HRun=2;HaplotypeScore=83.0308;InbreedingCoeff=0.9111;MQ=82.41;MQ0=0;MQRankSum=-9.604;QD=32.06;ReadPosRankSum=-2.690;VQSLOD=2.4607;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.16:0,60,874	0/0:7,0:7:21.07:0,21,315	0/0:23,0:23:69.16:0,69,947	0/0:19,0:19:51.17:0,51,723	0/0:35,0:35:99:0,102,1473	0/0:35,0:35:99:0,99,1461	0/0:13,0:13:39.13:0,39,584	1/1:2,28:30:87.28:1118,87,0	0/0:21,0:21:63.15:0,63,873	0/0:23,0:23:69.23:0,69,1018	0/0:24,0:24:69.22:0,69,1013	0/0:24,0:24:69.23:0,69,1034	0/0:22,0:21:60.15:0,60,851	0/0:30,0:30:84.21:0,84,1200	0/0:32,0:32:90.30:0,90,1349	1/1:2,9:11:27.07:336,27,0	0/0:17,0:17:51.12:0,51,715	0/0:16,0:16:45.14:0,45,653	1/1:3,15:18:36.12:467,36,0	1/1:2,18:20:51.15:647,51,0	1/1:2,12:14:30.10:389,30,0	0/0:27,0:27:78.22:0,78,1143	0/0:19,0:19:51.13:0,51,739	0/0:19,0:19:51.17:0,51,763	0/0:22,0:22:60.18:0,60,861	0/1:2,24:26:14.63:820,0,15	1/1:5,16:21:60.11:728,60,0	1/1:4,13:17:42.12:529,42,0
chr10	100936687	.	AT	A	6690.92	PASS	AB=0.591;AC=23;AF=0.411;AN=56;BaseQRankSum=13.263;DP=582;FS=9.757;HRun=5;HaplotypeScore=77.0493;InbreedingCoeff=0.9184;MQ=82.21;MQ0=0;MQRankSum=-7.427;QD=27.76;ReadPosRankSum=-1.725;VQSLOD=3.8965;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.12:0,57,739	0/0:4,0:4:12.04:0,12,163	0/0:25,0:25:69.23:0,69,938	0/0:17,0:17:41.90:0,42,510	0/0:38,0:38:99:0,105,1418	0/0:33,0:33:93.29:0,93,1252	0/0:14,0:14:39.11:0,39,513	1/1:3,29:32:93.25:1041,93,0	0/0:19,0:19:57.19:0,57,778	0/0:23,0:23:63.21:0,63,847	0/0:23,0:23:63.20:0,63,846	1/1:0,24:24:69.20:782,69,0	0/0:18,0:18:48.16:0,48,656	0/0:25,0:25:69.21:0,69,914	0/0:30,0:30:90.30:0,90,1230	1/1:1,6:7:18.05:204,18,0	0/0:14,0:14:39.10:0,39,513	0/0:17,0:17:36.12:0,36,492	1/1:1,21:22:60.13:645,60,0	1/1:1,18:19:45.07:494,45,0	1/1:3,10:13:15.04:170,15,0	1/1:2,24:26:69.20:782,69,0	1/1:3,13:16:36.10:408,36,0	1/1:2,17:19:45.13:510,45,0	0/0:21,0:21:63.21:0,63,861	0/1:8,18:26:53.82:602,0,54	1/1:2,21:23:53.65:578,54,0	1/1:0,14:14:42.12:476,42,0
chr10	100937340	.	GTC	G	3050.59	PASS	AB=0.759;AC=15;AF=0.268;AN=56;BaseQRankSum=11.817;DP=787;FS=8.729;HRun=0;HaplotypeScore=202.3724;InbreedingCoeff=0.8357;MQ=63.70;MQ0=13;MQRankSum=-10.912;QD=15.56;ReadPosRankSum=2.431;VQSLOD=2.4730;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:39.83:0,40,640	0/0:7,0:7:10.59:0,11,151	0/0:60,1:28:56.73:0,57,836	0/0:111,0:51:63.34:0,63,908	0/0:34,0:34:99:0,99,1607	0/0:21,0:21:57.16:0,57,946	0/0:33,0:33:90.16:0,90,1457	1/1:16,23:32:23.06:621,23,0	0/0:27,0:27:78.25:0,78,1302	0/0:22,0:22:60.19:0,60,981	0/0:24,0:24:62.79:0,63,1001	0/0:23,0:23:29.94:0,30,464	0/0:25,0:25:63.19:0,63,1047	0/0:23,0:23:57.04:0,57,969	0/0:22,0:21:29.70:0,30,483	0/1:15,7:22:13.06:315,0,13	0/0:28,0:28:75.26:0,75,1263	0/0:12,0:12:33.11:0,33,551	1/1:5,5:10:12.28:133,12,0	1/1:18,15:33:29.70:562,30,0	1/1:3,12:15:3.48:40,3,0	0/0:27,0:26:35.18:0,35,601	0/0:19,1:18:30.10:0,30,500	0/0:24,0:24:14.84:0,15,219	0/0:21,0:21:57.17:0,57,924	1/1:12,16:25:53.74:701,54,0	1/1:17,21:35:9.02:682,9,0	1/1:6,5:9:5.73:183,6,0
chr10	100937348	.	CTG	C	2082.17	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=15.759;DP=798;FS=7.232;HRun=0;HaplotypeScore=208.9040;InbreedingCoeff=0.8683;MQ=64.45;MQ0=15;MQRankSum=-13.738;QD=10.68;ReadPosRankSum=-0.680;VQSLOD=2.0282;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:35.29:0,35,595	0/1:6,0:6:1.60:2,0,94	0/0:75,0:31:58.41:0,58,921	0/0:111,0:51:35.83:0,36,901	0/0:34,0:34:99:0,102,1804	0/0:22,0:22:61.03:0,61,1023	0/0:33,0:33:96.01:0,96,1606	1/1:39,0:29:62.87:402,63,0	0/0:27,0:27:78.22:0,78,1381	0/0:23,0:23:66.15:0,66,1101	0/0:26,0:26:52.46:0,52,1136	0/0:23,0:23:26.88:0,27,312	0/0:22,1:23:66.20:0,66,1142	0/0:21,0:21:59.99:0,60,974	0/0:19,2:20:12.68:0,13,433	1/1:19,2:20:39.44:234,39,0	0/0:28,0:28:81.26:0,81,1492	0/0:14,0:14:39.07:0,39,637	1/1:11,0:10:1.68:96,2,0	1/1:24,3:26:55.19:345,55,0	1/1:14,0:14:3.18:23,3,0	0/0:31,0:29:34.98:0,35,372	0/0:20,0:18:24.89:0,25,397	0/0:23,0:23:8.47:0,8,129	0/0:23,0:23:65.74:0,66,1031	1/1:24,2:23:62.71:434,63,0	1/1:39,2:38:87.21:594,87,0	1/1:10,0:8:22.79:147,23,0
chr10	100937362	.	CTGTCT	C	3081.41	PASS	AB=0.976;AC=21;AF=0.375;AN=56;BaseQRankSum=14.129;DP=795;FS=6.281;HRun=0;HaplotypeScore=224.0312;InbreedingCoeff=0.2576;MQ=64.55;MQ0=23;MQRankSum=-13.364;QD=9.57;ReadPosRankSum=-3.913;VQSLOD=1.2091;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:50.23:50,0,293	0/1:4,0:4:41.86:42,0,83	0/0:94,0:29:81.01:0,81,1450	0/0:109,0:43:59.12:0,59,1157	0/0:38,0:38:99:0,114,3116	0/0:23,0:23:66.23:0,66,1987	0/0:32,0:32:87.85:0,88,2344	1/1:39,0:30:0.63:477,1,0	0/0:24,0:24:69.24:0,69,2022	0/0:22,0:22:66.22:0,66,1825	0/0:28,0:28:84.20:0,84,2372	1/1:24,0:24:5.71:52,6,0	0/0:23,0:23:66.21:0,66,1954	0/0:18,0:18:50.56:0,51,1333	0/1:16,2:16:82.09:82,0,349	1/1:18,2:19:31.64:413,32,0	0/0:28,0:28:84.27:0,84,2506	0/0:13,0:13:36.12:0,36,1153	0/1:16,0:15:15.80:299,0,16	1/1:25,1:24:15.29:285,15,0	0/1:6,0:6:0.25:0,0,0	0/1:33,0:29:18.24:52,0,18	1/1:22,0:17:14.80:243,15,0	1/1:22,0:22:0.56:35,1,0	0/0:19,0:19:57.20:0,57,1678	0/1:19,1:17:99:277,0,112	0/1:40,3:40:54.58:806,0,55	0/1:11,0:10:51.76:147,0,52
chr10	100937363	.	TGTC	T	4248.89	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=16.712;DP=780;FS=0.352;HRun=0;HaplotypeScore=196.7641;InbreedingCoeff=0.7453;MQ=64.46;MQ0=23;MQRankSum=-15.274;QD=13.71;ReadPosRankSum=-4.961;VQSLOD=3.6051;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:47.81:48,0,271	0/1:4,0:4:26.72:27,0,62	0/0:95,0:29:79.14:0,79,1274	0/0:103,0:41:42.46:0,42,1029	0/0:38,0:38:99:0,114,2514	0/0:23,0:23:66.23:0,66,1563	0/0:31,0:31:89.84:0,90,1872	1/1:36,0:28:53.17:468,53,0	0/0:23,0:23:69.23:0,69,1569	0/0:23,0:23:69.23:0,69,1564	0/0:29,0:29:87.15:0,87,1898	1/1:19,3:22:17.91:173,18,0	0/0:23,0:23:66.21:0,66,1492	0/0:18,0:18:50.13:0,50,1037	0/1:18,0:16:47.76:48,0,329	1/1:20,0:19:46.46:456,46,0	0/0:28,0:28:84.27:0,84,1957	0/0:13,0:13:36.12:0,36,885	1/1:15,0:14:32.33:317,32,0	1/1:23,1:22:48.07:492,48,0	1/1:4,1:5:10.88:52,11,0	1/1:25,8:29:15.70:189,16,0	1/1:20,2:17:32.87:308,33,0	1/1:20,2:21:1.27:36,1,0	0/0:19,0:19:57.20:0,57,1340	1/1:20,0:17:47.65:473,48,0	1/1:42,0:39:94.60:968,95,0	1/1:9,1:9:20.08:193,20,0
chr10	100937366	.	CT	C	2734.45	PASS	AB=0.866;AC=24;AF=0.429;AN=56;BaseQRankSum=15.274;DP=773;FS=2.256;HRun=2;HaplotypeScore=181.6843;InbreedingCoeff=0.6335;MQ=63.36;MQ0=25;MQRankSum=-14.079;QD=8.97;ReadPosRankSum=-3.083;VQSLOD=0.2844;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:75.52:76,0,122	0/1:2,2:4:26.55:27,0,34	0/0:97,0:28:77.40:0,77,867	0/0:100,0:38:35.63:0,36,699	0/0:38,0:38:99:0,113,1556	0/0:23,0:23:66.22:0,66,966	0/0:26,0:26:72.19:0,72,1054	1/1:30,3:28:13.75:421,14,0	0/0:23,0:23:66.84:0,67,926	0/0:24,0:24:69.22:0,69,983	0/0:31,0:31:87.81:0,88,1175	1/1:22,0:22:5.88:71,6,0	0/0:23,0:23:65.02:0,65,911	0/0:17,0:17:46.28:0,46,606	0/1:15,4:17:54.39:54,0,178	1/1:13,3:19:30.30:361,30,0	0/0:29,0:29:87.22:0,87,1237	0/0:12,1:13:36.12:0,36,539	1/1:11,3:14:13.71:248,14,0	1/1:9,8:22:14.65:273,15,0	0/0:3,0:5:1.26:0,1,4	0/1:34,1:31:1.10:57,0,1	1/1:17,4:16:15.04:176,15,0	1/1:18,4:21:4.26:62,4,0	0/0:19,0:19:57.19:0,57,813	1/1:8,4:17:40.14:315,40,0	1/1:19,15:38:9.40:667,9,0	1/1:2,5:9:1.76:124,2,0
chr10	100937367	.	T	TCTCTC	4663.91	PASS	AB=0.758;AC=27;AF=0.482;AN=56;BaseQRankSum=15.004;DP=791;FS=2.671;HRun=0;HaplotypeScore=222.3396;InbreedingCoeff=0.6849;MQ=62.44;MQ0=25;MQRankSum=-14.883;QD=14.05;ReadPosRankSum=-4.157;VQSLOD=3.8647;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:17:99:143,0,117	0/1:4,0:4:34.07:66,0,34	0/0:97,0:28:77.28:0,77,962	0/0:97,0:37:59.17:0,59,725	0/0:37,0:38:99:0,114,2222	0/0:23,0:23:66.22:0,66,1368	0/0:25,0:25:72.09:0,72,1546	1/1:20,0:30:61.68:735,62,0	0/0:21,0:23:69.23:0,69,1477	0/0:23,0:23:69.23:0,69,1342	0/0:31,0:31:87.28:0,87,1870	1/1:4,1:23:5.76:72,6,0	0/0:22,0:23:66.22:0,66,1423	0/0:15,0:17:47.98:0,48,909	0/1:12,1:19:96.38:96,0,173	1/1:12,0:20:47:545,47,0	0/0:29,0:29:87.16:0,87,1752	0/0:13,0:13:36.12:0,36,836	1/1:15,0:18:27.05:486,27,0	1/1:22,0:23:14.02:345,14,0	1/1:4,0:5:0.89:2,1,0	1/1:9,1:34:3.11:85,3,0	1/1:8,0:18:15.05:267,15,0	1/1:7,0:20:5.98:86,6,0	0/0:19,0:19:57.19:0,57,1014	1/1:20,0:19:54.86:514,55,0	1/1:39,0:41:37.37:1021,37,0	1/1:10,0:9:5.39:200,5,0
chr10	100937368	.	TC	T	2551.05	PASS	AB=0.971;AC=25;AF=0.446;AN=56;BaseQRankSum=15.660;DP=779;FS=1.233;HRun=1;HaplotypeScore=182.3348;InbreedingCoeff=0.5487;MQ=62.18;MQ0=25;MQRankSum=-15.079;QD=7.92;ReadPosRankSum=-3.892;VQSLOD=-0.5856;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:32.01:32,0,70	0/1:4,0:4:8.56:9,0,31	0/0:95,0:26:71.34:0,71,789	0/0:96,0:35:59.46:0,59,690	0/0:38,0:38:99:0,112,1620	0/0:24,0:24:69.21:0,69,1022	0/0:25,0:25:72.20:0,72,1091	1/1:27,10:28:13.17:334,13,0	0/0:23,0:23:61.15:0,61,934	0/0:24,0:24:66.22:0,66,986	0/0:31,0:31:86.52:0,87,1292	1/1:23,0:23:5.88:37,6,0	0/0:23,0:23:63.68:0,64,968	0/0:17,0:17:44.39:0,44,644	0/1:22,0:19:17.63:18,0,170	1/1:19,1:19:46.86:375,47,0	0/0:29,0:29:84.28:0,84,1300	0/0:13,0:13:36.12:0,36,574	0/1:15,3:17:31.91:171,0,32	1/1:21,3:22:48.66:436,49,0	1/1:5,0:5:4.16:19,4,0	1/1:38,0:34:2.80:29,3,0	0/1:23,0:18:24.92:63,0,25	1/1:21,0:20:3.15:22,3,0	0/0:19,0:19:57.15:0,57,793	1/1:17,5:19:26.18:399,26,0	1/1:33,6:36:85.26:671,85,0	1/1:9,0:8:9.33:140,9,0
chr10	100937395	.	C	CACA	2529.53	PASS	AB=0.691;AC=11;AF=0.196;AN=56;BaseQRankSum=6.090;DP=618;FS=1.688;HRun=0;HaplotypeScore=137.9357;InbreedingCoeff=0.1085;MQ=50.62;MQ0=18;MQRankSum=-5.100;QD=17.45;ReadPosRankSum=-1.216;VQSLOD=3.1318;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:21.06:0,21,264	0/1:5,0:5:9.48:9,0,33	0/0:40,0:6:15.05:0,15,223	0/0:35,0:8:14.97:0,15,151	0/0:36,0:36:99:0,99,1581	0/0:18,0:18:45.79:0,46,717	0/0:21,0:21:63.21:0,63,940	0/1:17,1:20:99:435,0,157	0/0:20,0:20:48.03:0,48,719	0/0:27,0:27:78.26:0,78,1155	0/0:31,0:31:90.30:0,90,1444	0/0:18,0:18:7.64:0,8,70	0/0:26,0:25:69.21:0,69,1056	0/0:17,0:17:47.86:0,48,746	0/0:20,0:17:2.33:0,2,86	0/1:7,11:18:7.98:491,0,8	0/0:34,0:34:93.27:0,93,1420	0/0:13,0:13:33.11:0,33,526	0/1:10,6:17:99:271,0,101	0/1:8,9:18:78.59:79,0,90	1/1:1,0:4:2.97:20,3,0	0/0:31,0:27:18.23:0,18,130	0/0:29,0:24:45.69:0,46,318	0/0:18,0:17:10.92:0,11,64	0/0:18,0:18:45.61:0,46,701	0/1:5,10:16:65.63:462,0,66	0/1:6,19:31:91.48:776,0,91	1/1:2,0:3:6.02:132,6,0
chr10	100937397	.	C	CA	204.69	PASS	AB=0.960;AC=7;AF=0.125;AN=56;BaseQRankSum=8.533;DP=606;FS=1.348;HRun=1;HaplotypeScore=127.2019;InbreedingCoeff=0.1283;MQ=49.42;MQ0=18;MQRankSum=-7.672;QD=1.75;ReadPosRankSum=3.950;VQSLOD=-0.6417;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:20.80:0,21,216	0/0:5,0:5:11.48:0,11,91	0/0:36,0:7:18.06:0,18,229	0/0:29,0:7:16.58:0,17,169	0/0:36,0:36:99:0,99,1278	0/0:18,0:18:51.63:0,52,649	0/0:22,0:22:66.16:0,66,802	0/1:24,0:19:3.46:3,0,249	0/0:18,0:18:51.15:0,51,635	0/0:27,0:27:81.22:0,81,1017	0/0:31,0:31:90.28:0,90,1153	0/0:19,0:19:14.63:0,15,133	0/0:26,0:25:72.20:0,72,905	0/0:17,0:17:47.89:0,48,604	0/0:20,0:17:17.87:0,18,164	0/1:17,2:17:25.42:86,0,25	0/0:33,0:33:93.26:0,93,1182	0/0:12,0:12:36.07:0,36,447	0/1:19,1:19:39.86:40,0,196	0/0:17,1:18:19.88:0,20,266	0/0:5,0:5:8.91:0,9,75	0/0:30,0:26:20.02:0,20,197	0/0:28,0:24:48.12:0,48,440	0/0:18,0:17:17.62:0,18,150	0/0:19,0:19:51.16:0,51,657	0/1:17,0:16:26.88:27,0,134	0/1:30,2:30:99:139,0,154	1/1:5,0:3:5.82:33,6,0
chr10	100937853	.	TAAA	T	9228.48	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=10.071;DP=713;FS=4.822;HRun=12;HaplotypeScore=132.5170;InbreedingCoeff=0.9739;MQ=71.96;MQ0=2;MQRankSum=-4.698;QD=30.26;ReadPosRankSum=0.743;VQSLOD=3.5154;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:31:28.66:0,29,61	0/0:1,0:9:7.48:0,7,16	0/0:16,0:17:37.74:0,38,520	0/0:19,0:18:23.34:0,23,353	0/0:25,0:28:75.21:0,75,1343	0/0:29,0:29:72.25:0,72,1412	0/0:24,0:25:67.45:0,67,1225	1/1:4,36:40:99:1337,108,0	0/0:25,0:25:63.20:0,63,1171	0/0:29,0:30:63.19:0,63,1173	0/0:36,0:36:99:0,102,1937	1/1:2,27:29:71.81:909,72,0	0/0:27,0:28:72.23:0,72,1374	0/0:29,1:30:40.31:0,40,1395	0/0:2,0:33:37.38:0,37,80	1/1:1,18:19:45.14:569,45,0	0/0:31,0:31:75.25:0,75,1438	0/0:14,0:15:36.12:0,36,676	1/1:1,11:12:30.05:356,30,0	1/1:3,21:24:54.09:676,54,0	1/1:2,20:24:51.96:707,52,0	1/1:3,28:31:75.20:948,75,0	1/1:3,17:20:48.14:603,48,0	1/1:8,33:41:81.18:1020,81,0	0/0:20,0:20:48.15:0,48,888	1/1:2,25:27:75.23:947,75,0	1/1:3,30:33:87.21:1081,87,0	1/1:3,2:5:5.98:76,6,0
chr10	100938292	.	TTG	T	4679.71	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.084;DP=738;FS=0.385;HRun=0;HaplotypeScore=98.3572;InbreedingCoeff=0.9703;MQ=87.93;MQ0=0;MQRankSum=-1.792;QD=43.33;ReadPosRankSum=4.777;VQSLOD=6.4184;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,2202	0/0:8,0:8:21.07:0,21,406	0/0:31,0:31:87.29:0,87,1580	0/0:28,0:28:81.14:0,81,1401	0/0:31,0:31:93.32:0,93,1782	0/0:19,0:19:57.20:0,57,1087	0/0:23,0:23:69.22:0,69,1300	0/0:36,0:36:96.32:0,96,1824	0/0:24,0:24:72.23:0,72,1313	0/0:28,0:28:75.26:0,75,1438	0/0:20,0:20:60.21:0,60,1144	1/1:0,28:28:81.28:1240,81,0	0/0:41,0:41:99:0,117,2259	0/0:32,1:33:53.39:0,53,1796	0/0:33,0:33:96.33:0,96,1829	0/0:24,0:24:69.24:0,69,1333	0/0:32,0:32:93.29:0,93,1760	0/0:18,0:18:51.17:0,51,985	0/0:25,0:25:72.25:0,72,1350	0/0:28,0:28:84.29:0,84,1622	0/0:26,0:26:78.27:0,78,1493	1/1:1,33:34:93.32:1419,93,0	1/1:0,25:25:72.24:1103,72,0	1/1:0,21:21:60.20:919,60,0	0/0:20,0:20:60.16:0,60,1082	0/0:23,0:23:69.24:0,69,1315	0/0:39,0:39:99:0,117,2257	0/0:2,0:2:6.02:0,6,116
chr10	100940291	.	C	CAAG	19267.20	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-16.581;DP=750;FS=2.400;HRun=0;HaplotypeScore=100.1279;InbreedingCoeff=0.9994;MQ=86.17;MQ0=0;MQRankSum=-7.104;QD=51.11;ReadPosRankSum=0.990;VQSLOD=7.1787;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,37:44:99:2266,108,0	0/0:14,0:14:42.14:0,42,645	0/0:28,0:28:66.22:0,66,991	0/0:25,0:25:48.08:0,48,676	0/0:32,0:32:86.94:0,87,1297	0/0:19,0:19:48.16:0,48,743	0/0:23,0:23:57.19:0,57,882	1/1:17,23:41:90.30:1887,90,0	0/0:34,0:34:99:0,99,1510	0/0:36,0:36:87.30:0,87,1347	0/0:19,0:19:57.19:0,57,880	1/1:5,27:33:87.30:1836,87,0	0/0:25,0:25:66.22:0,66,1020	0/0:18,0:18:48.14:0,48,719	0/0:23,0:23:63.20:0,63,953	1/1:3,28:32:81.28:1740,81,0	0/0:26,0:26:63.21:0,63,972	0/0:20,0:20:54.16:0,54,807	1/1:6,11:18:42.14:845,42,0	1/1:8,18:26:60.20:1203,60,0	1/1:7,22:30:66.23:1418,66,0	1/1:2,30:34:93.32:1934,93,0	1/1:6,20:27:66.70:1318,67,0	1/1:1,30:32:72.25:1545,72,0	0/0:31,0:31:81.27:0,81,1254	1/1:4,22:27:69.24:1482,69,0	1/1:2,24:26:63.22:1344,63,0	1/1:0,7:7:21.07:451,21,0
chr10	100942204	.	A	AAAAAC	9632.89	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-13.994;DP=709;FS=1.210;HRun=0;HaplotypeScore=123.5779;InbreedingCoeff=0.9983;MQ=63.80;MQ0=2;MQRankSum=-3.181;QD=49.91;ReadPosRankSum=-1.572;VQSLOD=4.9368;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:75.25:0,75,1307	0/0:11,0:11:33.11:0,33,610	0/0:27,0:21:32.98:0,33,609	0/0:26,0:19:29.10:0,29,397	0/0:32,0:32:75.26:0,75,1397	0/0:22,0:22:51.13:0,51,914	0/0:20,0:20:39.12:0,39,659	1/1:12,17:32:63.56:1354,64,0	0/0:32,0:32:69.23:0,69,1247	0/0:37,0:37:84.27:0,84,1504	0/0:29,0:29:69.24:0,69,1293	0/0:22,0:22:60.21:0,60,1122	0/0:24,0:24:54.18:0,54,1000	0/0:18,0:18:39.12:0,39,682	0/0:35,0:35:84.27:0,84,1468	1/1:3,15:19:36.12:1042,36,0	0/0:30,0:30:69.18:0,69,1219	0/0:21,0:21:49.95:0,50,934	1/1:7,5:12:18.04:421,18,0	1/1:6,25:32:72.16:1842,72,0	1/1:6,11:17:33.11:956,33,0	0/0:25,0:25:57.17:0,57,979	0/0:26,0:26:66.23:0,66,1207	0/0:23,0:23:63.22:0,63,1166	0/0:27,0:26:54.18:0,54,1008	1/1:5,20:26:63.19:1718,63,0	1/1:5,29:36:51.17:1430,51,0	1/1:5,10:17:30.10:870,30,0
chr10	100943333	.	AT	A	1666.26	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.939;DP=523;FS=2.401;HRun=6;HaplotypeScore=47.3475;InbreedingCoeff=0.9810;MQ=74.79;MQ0=0;MQRankSum=-3.461;QD=27.77;ReadPosRankSum=3.442;VQSLOD=4.1148;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:24.06:258,24,0	0/0:12,0:12:33.11:0,33,434	0/0:13,0:13:39.12:0,39,489	0/0:8,0:7:17.95:0,18,195	0/0:32,0:32:96.31:0,96,1263	0/0:22,0:22:57.19:0,57,750	0/0:17,0:17:48.13:0,48,603	0/0:32,0:32:90.28:0,90,1171	0/0:17,0:17:45.13:0,45,577	0/0:35,0:35:99:0,99,1289	0/0:28,0:28:81.26:0,81,1053	1/1:0,19:19:57.14:613,57,0	0/0:21,0:21:60.18:0,60,773	0/0:16,0:16:48.13:0,48,613	0/0:25,0:25:75.24:0,75,973	0/0:17,0:17:51.17:0,51,671	0/0:23,0:23:69.22:0,69,907	0/0:7,0:7:18.02:0,18,218	0/0:23,0:23:56.92:0,57,722	0/0:27,0:27:81.26:0,81,1053	0/0:7,0:7:21.07:0,21,276	1/1:0,12:12:36.09:387,36,0	1/1:0,15:15:45.11:484,45,0	1/1:0,4:4:9.02:97,9,0	0/0:20,0:20:57.19:0,57,750	0/0:22,0:22:63.20:0,63,829	0/0:25,0:24:75.23:0,75,968	0/0:14,0:14:42.14:0,42,553
chr10	100943403	.	ATAG	A	118.83	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.040;DP=570;FS=0.000;HRun=0;HaplotypeScore=77.5979;InbreedingCoeff=0.9374;MQ=70.71;MQ0=0;MQRankSum=-2.142;QD=19.80;ReadPosRankSum=0.559;VQSLOD=3.3736;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:5:12.04:205,12,0	0/0:9,0:9:27.09:0,27,622	0/0:11,0:11:30.10:0,30,687	0/0:4,0:4:12.04:0,12,266	0/0:30,0:30:90.27:0,90,1955	0/0:25,0:25:75.24:0,75,1663	0/0:23,0:23:66.21:0,66,1452	0/0:30,0:30:84.27:0,84,1833	0/0:19,0:19:57.20:0,57,1314	0/0:27,0:27:75.26:0,75,1729	0/0:31,0:31:90.31:0,90,2073	0/0:19,0:19:57.18:0,57,1270	0/0:15,0:15:45.15:0,45,1037	0/0:16,0:16:48.15:0,48,1059	0/0:26,0:26:75.26:0,75,1728	0/0:15,0:15:42.14:0,42,969	0/0:37,0:37:99:0,105,2343	0/0:15,0:15:45.15:0,45,1008	0/0:21,0:21:60.16:0,60,1221	0/0:31,0:31:93.29:0,93,2030	0/0:14,0:14:42.13:0,42,921	0/0:21,0:21:63.22:0,63,1452	0/0:18,0:18:54.17:0,54,1201	0/0:14,0:14:42.14:0,42,968	0/0:20,0:20:60.19:0,60,1331	0/0:29,0:29:84.28:0,84,1896	0/0:26,0:26:75.26:0,75,1721	0/0:18,0:18:45.15:0,45,1030
chr10	100943994	.	TC	T	3875.19	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.389;DP=621;FS=1.326;HRun=1;HaplotypeScore=65.2205;InbreedingCoeff=0.9959;MQ=72.26;MQ0=3;MQRankSum=-2.769;QD=38.37;ReadPosRankSum=3.304;VQSLOD=4.3488;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:57.15:774,57,0	0/0:12,0:12:36.11:0,36,530	0/0:31,1:26:65.98:0,66,907	0/0:31,0:25:43.65:0,44,823	0/0:19,0:19:57.19:0,57,852	0/0:22,0:22:66.21:0,66,987	0/0:21,0:21:63.20:0,63,941	0/0:33,0:33:90.26:0,90,1259	0/0:30,0:30:90.27:0,90,1334	0/0:21,0:21:63.19:0,63,916	0/0:16,0:16:48.13:0,48,710	1/1:0,34:34:96.32:1342,96,0	0/0:25,0:25:75.25:0,75,1148	0/0:22,0:22:66.21:0,66,985	0/0:17,0:17:51.17:0,51,776	0/0:26,0:26:78.25:0,78,1171	0/0:21,0:21:59.01:0,59,874	0/0:17,0:17:51.17:0,51,765	0/0:14,0:13:36.10:0,36,508	0/0:20,0:20:60.20:0,60,914	0/0:23,0:23:66.17:0,66,981	1/1:0,10:10:27.09:377,27,0	1/1:0,5:5:15.05:209,15,0	1/1:0,29:29:84.28:1173,84,0	0/0:29,0:29:87.30:0,87,1330	0/0:32,0:32:96.33:0,96,1470	0/0:25,0:24:75.24:0,75,1118	0/0:12,0:12:33.06:0,33,458
chr10	100944343	.	TTG	T	5162.54	PASS	AB=0.941;AC=19;AF=0.352;AN=54;BaseQRankSum=12.243;DP=744;FS=5.554;HRun=0;HaplotypeScore=115.3111;InbreedingCoeff=0.7344;MQ=63.18;MQ0=12;MQRankSum=-2.635;QD=17.50;ReadPosRankSum=0.756;VQSLOD=4.7411;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:4.05:0,4,25	0/0:14,0:14:27.09:0,27,433	0/0:36,0:25:47.55:0,48,650	0/0:26,0:13:18.06:0,18,279	0/0:31,3:35:18.95:0,19,1255	0/0:30,0:31:67.11:0,67,1206	0/0:23,1:24:14.95:0,15,685	1/1:12,22:34:63.11:718,63,0	0/0:21,0:21:51.13:0,51,767	0/0:30,2:34:10.10:0,10,1046	0/0:24,0:24:57.18:0,57,891	0/0:8,0:20:12.45:0,12,100	0/0:24,1:25:30.03:0,30,965	0/0:22,1:23:8.97:0,9,636	0/0:30,0:30:72.25:0,72,1153	1/1:7,19:27:57.01:665,57,0	0/1:21,3:24:21.22:21,0,646	0/1:13,1:14:3.11:3,0,420	1/1:9,12:22:35.92:397,36,0	1/1:8,19:27:2.92:514,3,0	1/1:9,36:45:38.92:943,39,0	./.	0/1:12,0:25:0:0,0,0	0/0:10,0:23:2.24:0,2,11	0/0:33,0:33:81.24:0,81,1249	1/1:7,25:32:29.67:801,30,0	1/1:6,21:28:63.02:738,63,0	1/1:2,11:11:30.09:362,30,0
chr10	100946227	.	CT	C	6376.99	PASS	AB=0.531;AC=15;AF=0.268;AN=56;BaseQRankSum=13.104;DP=684;FS=0.669;HRun=2;HaplotypeScore=65.6998;InbreedingCoeff=0.9081;MQ=90.07;MQ0=0;MQRankSum=-1.179;QD=35.63;ReadPosRankSum=1.665;VQSLOD=5.3667;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1669	0/0:14,0:14:42.13:0,42,610	0/0:21,0:21:52.72:0,53,827	0/0:31,0:31:75.24:0,75,1069	0/0:34,0:34:99:0,102,1505	0/0:27,0:27:75.21:0,75,1064	0/0:23,0:23:69.22:0,69,1014	1/1:0,35:35:99:1310,102,0	0/0:28,0:28:84.27:0,84,1236	0/0:29,0:29:87.26:0,87,1233	0/0:24,0:24:72.22:0,72,1039	0/0:27,0:27:78.24:0,78,1131	0/0:26,0:26:78.24:0,78,1145	0/0:21,0:21:63.15:0,63,869	0/0:31,0:31:84.28:0,84,1258	1/1:1,28:29:39.31:1007,39,0	0/0:31,0:31:93.25:0,93,1312	0/0:14,0:14:42.14:0,42,629	1/1:0,24:24:72.22:921,72,0	1/1:1,11:12:33.11:428,33,0	1/1:1,22:23:57.19:740,57,0	0/0:18,0:18:54.17:0,54,790	0/0:25,0:25:72.24:0,72,1078	0/0:20,0:20:57.19:0,57,853	0/0:21,0:21:63.20:0,63,907	0/1:2,15:17:38.80:533,0,39	1/1:1,31:32:90.29:1165,90,0	1/1:0,7:7:21.07:273,21,0
chr10	100946306	.	GT	G	1179.71	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.818;DP=728;FS=0.000;HRun=3;HaplotypeScore=74.7810;InbreedingCoeff=0.9994;MQ=85.13;MQ0=0;MQRankSum=-2.211;QD=30.25;ReadPosRankSum=1.523;VQSLOD=3.3326;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,1734	1/1:1,13:14:39.12:483,39,0	0/0:23,0:23:51.18:0,51,794	0/0:22,0:22:42.35:0,42,627	0/0:28,0:28:81.27:0,81,1165	0/0:25,0:25:75.25:0,75,1078	0/0:25,0:25:75.22:0,75,1042	0/0:29,0:29:81.26:0,81,1135	0/0:31,0:31:93.30:0,93,1320	0/0:34,0:34:99:0,99,1387	0/0:22,0:22:66.19:0,66,898	0/0:24,0:24:69.20:0,69,941	0/0:36,0:36:99:0,108,1446	0/0:30,0:30:90.30:0,90,1294	1/1:0,25:25:66.21:818,66,0	0/0:31,0:31:90.28:0,90,1261	0/0:26,0:26:78.25:0,78,1104	0/0:23,0:23:69.17:0,69,934	0/0:25,0:25:72.21:0,72,975	0/0:30,0:30:84.27:0,84,1191	0/0:34,0:34:99:0,99,1368	0/0:24,0:24:72.23:0,72,1018	0/0:22,0:22:66.22:0,66,944	0/0:18,0:18:51.13:0,51,711	0/0:16,0:16:48.16:0,48,690	0/0:21,0:21:63.19:0,63,874	0/0:34,0:34:99:0,102,1415	0/0:12,0:12:27.09:0,27,379
chr10	100948577	.	AGT	A	1592.40	PASS	AB=1.000;AC=35;AF=0.729;AN=48;BaseQRankSum=0.630;DP=718;FS=0.000;HRun=0;HaplotypeScore=109.4375;InbreedingCoeff=0.7265;MQ=71.51;MQ0=9;MQRankSum=-1.807;QD=3.64;ReadPosRankSum=2.053;VQSLOD=2.2971;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,5:37:5.80:46,6,0	0/0:14,0:14:30.08:0,30,397	./.	./.	1/1:16,2:19:20.88:207,21,0	0/1:19,0:19:4.64:39,0,5	1/1:26,6:32:17.98:181,18,0	./.	1/1:13,6:20:14.66:125,15,0	1/1:25,0:25:12.01:116,12,0	1/1:19,2:24:11.86:110,12,0	0/0:26,0:26:27.01:0,27,265	1/1:26,8:35:17.53:172,18,0	1/1:16,8:25:8.86:79,9,0	0/0:20,0:35:36.02:0,36,367	1/1:18,0:27:14.20:70,14,0	1/1:23,8:32:17.56:177,18,0	1/1:14,8:22:15.03:163,15,0	1/1:19,0:19:2.84:14,3,0	1/1:12,0:21:14.20:70,14,0	./.	0/0:28,0:26:12:0,12,120	0/0:11,0:21:11.54:0,12,104	0/0:21,0:35:12.01:0,12,123	1/1:14,7:21:3.95:62,4,0	1/1:15,0:22:5.41:37,5,0	1/1:18,0:25:17.04:84,17,0	1/1:7,0:8:2.84:14,3,0
chr10	100950501	.	A	AAT	458.57	PASS	AB=0.947;AC=9;AF=0.161;AN=56;BaseQRankSum=-5.095;DP=352;FS=1.057;HRun=0;HaplotypeScore=59.0134;InbreedingCoeff=0.7134;MQ=65.22;MQ0=5;MQRankSum=0.179;QD=13.90;ReadPosRankSum=1.183;VQSLOD=3.2663;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:15:19.57:0,20,237	0/0:0,0:6:11.36:0,11,56	0/0:11,0:5:4.55:0,5,28	0/0:22,0:11:10.15:0,10,105	0/1:17,1:18:4.19:4,0,479	0/0:15,0:15:39.09:0,39,459	0/0:4,0:4:12.04:0,12,148	0/0:42,0:42:93.28:0,93,1143	0/0:9,0:9:27.09:0,27,337	0/0:22,0:22:35.64:0,36,619	0/0:6,0:6:15.05:0,15,188	1/1:0,5:5:15.05:248,15,0	0/0:14,0:14:36.11:0,36,447	0/0:13,0:13:36.11:0,36,450	0/0:4,0:7:6.93:0,7,31	0/0:8,0:8:12.04:0,12,150	0/0:10,0:10:23.77:0,24,254	0/0:19,0:18:48.15:0,48,599	0/0:13,0:11:27.09:0,27,336	0/0:18,0:16:39.11:0,39,474	0/0:6,0:6:15.05:0,15,188	1/1:1,1:2:3.01:50,3,0	1/1:0,5:5:12.04:198,12,0	1/1:0,3:3:6.02:99,6,0	0/0:7,0:7:18.06:0,18,224	0/0:21,0:20:51.16:0,51,638	0/0:21,0:20:39.12:0,39,485	0/0:10,0:10:27.01:0,27,303
chr10	100950539	.	C	CA	7069.63	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=10.819;DP=450;FS=24.247;HRun=1;HaplotypeScore=61.4121;InbreedingCoeff=0.9914;MQ=58.56;MQ0=4;MQRankSum=-1.496;QD=36.25;ReadPosRankSum=-1.184;VQSLOD=2.7223;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:42.14:0,42,545	1/1:3,6:9:18.49:245,18,0	0/0:19,0:6:18.06:0,18,233	0/0:23,0:10:20.42:0,20,229	0/0:21,0:21:63.20:0,63,818	0/0:15,0:15:45.10:0,45,551	0/0:8,0:8:24.08:0,24,310	1/1:3,40:43:99:1782,129,0	0/0:10,0:10:30.10:0,30,390	0/0:23,0:23:60.19:0,60,776	0/0:10,0:10:30.04:0,30,367	0/0:8,0:8:24.06:0,24,297	0/0:17,0:17:51.17:0,51,661	0/0:16,0:16:48.16:0,48,623	1/1:0,7:7:15.05:225,15,0	1/1:1,10:11:27.09:404,27,0	0/0:11,0:10:27.09:0,27,350	0/0:21,0:21:57.16:0,57,719	1/1:3,14:17:48.77:651,49,0	1/1:2,30:30:87.21:1275,87,0	1/1:1,10:11:27.01:377,27,0	0/0:6,0:6:17.79:0,18,207	0/0:11,0:11:33.11:0,33,427	0/0:7,0:7:21.05:0,21,255	0/0:12,0:12:33.11:0,33,428	1/1:2,19:20:56.89:775,57,0	1/1:4,27:31:66.52:911,67,0	1/1:1,12:13:30.06:424,30,0
chr10	100950540	.	AC	A	3592.57	PASS	AB=0.939;AC=17;AF=0.304;AN=56;BaseQRankSum=12.130;DP=453;FS=22.004;HRun=1;HaplotypeScore=73.6217;InbreedingCoeff=0.6918;MQ=58.57;MQ0=4;MQRankSum=0.601;QD=18.14;ReadPosRankSum=0.661;VQSLOD=2.5452;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:41.82:0,42,661	1/1:7,3:10:1.27:117,1,0	0/0:19,0:6:18.06:0,18,278	0/0:22,0:10:20.41:0,20,252	0/0:21,0:21:63.21:0,63,1007	0/0:15,0:15:45.14:0,45,675	0/0:8,0:8:24.08:0,24,369	1/1:39,3:42:99:1072,125,0	0/0:10,0:10:30.10:0,30,479	0/0:24,0:24:69.22:0,69,1032	0/0:10,0:10:29.46:0,29,429	0/0:8,0:8:24.07:0,24,360	0/0:17,0:17:51.17:0,51,806	0/0:16,0:16:48.16:0,48,767	0/1:7,0:7:40.18:70,0,40	1/1:10,1:11:9.82:143,10,0	0/0:11,0:10:27.09:0,27,431	0/0:21,0:21:60.16:0,60,900	1/1:16,2:18:50.24:411,50,0	1/1:31,2:31:61.76:593,62,0	1/1:10,1:11:26.75:200,27,0	0/0:6,0:6:15.52:0,16,241	0/0:11,0:11:33.11:0,33,508	0/0:7,0:7:21.07:0,21,315	0/0:12,0:12:36.12:0,36,565	1/1:19,2:20:32.65:459,33,0	0/1:28,4:32:42.53:360,0,43	0/1:12,1:13:25.44:168,0,25
chr10	100950688	.	AGTG	A	4754.06	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=17.163;DP=512;FS=1.692;HRun=0;HaplotypeScore=119.5026;InbreedingCoeff=0.9907;MQ=71.46;MQ0=0;MQRankSum=-16.900;QD=28.13;ReadPosRankSum=-0.967;VQSLOD=5.0255;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.09:0,51,1193	1/1:1,8:9:24.06:259,24,0	0/0:14,0:14:42.12:0,42,906	0/0:9,0:9:21.07:0,21,422	0/0:28,0:28:84.27:0,84,2000	0/0:23,0:23:69.24:0,69,1698	0/0:13,0:13:39.12:0,39,909	1/1:9,15:24:22.31:572,22,0	0/0:15,0:15:45.13:0,45,1057	0/0:35,0:35:99:0,105,2516	0/0:17,0:17:51.18:0,51,1229	0/0:28,0:28:84.29:0,84,2016	0/0:26,0:26:78.22:0,78,1771	0/0:25,0:25:75.24:0,75,1796	1/1:1,18:19:57.11:607,57,0	1/1:0,15:15:45.12:489,45,0	0/0:12,0:12:36.12:0,36,887	0/0:12,0:12:30.10:0,30,731	1/1:2,11:13:12.17:361,12,0	1/1:2,21:22:66.12:702,66,0	1/1:7,3:10:14.93:125,15,0	0/0:25,0:25:75.26:0,75,1823	0/0:18,0:18:54.10:0,54,1267	0/0:8,0:8:24.08:0,24,567	0/0:18,0:18:54.19:0,54,1330	1/1:2,15:17:48.13:532,48,0	1/1:3,28:31:81.16:871,81,0	1/1:1,7:8:21.06:236,21,0
chr10	100950691	.	GAAA	G	3233.06	PASS	AB=0.900;AC=21;AF=0.375;AN=56;BaseQRankSum=17.671;DP=508;FS=1.700;HRun=3;HaplotypeScore=124.1210;InbreedingCoeff=0.9269;MQ=73.69;MQ0=0;MQRankSum=-16.664;QD=19.59;ReadPosRankSum=-0.318;VQSLOD=0.2967;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.20:0,57,1401	1/1:8,0:8:23.88:182,24,0	0/0:16,0:16:45:0,45,972	0/1:8,0:9:6.81:7,0,209	0/0:27,0:27:81.28:0,81,1996	0/0:24,0:24:72.25:0,72,1732	0/0:14,0:14:42.14:0,42,1032	1/1:18,1:19:49.89:395,50,0	0/0:14,0:14:42.14:0,42,1035	0/0:35,0:35:99:0,105,2582	0/0:16,0:16:48.16:0,48,1183	0/0:27,0:27:81.24:0,81,1850	0/0:27,0:27:81.28:0,81,1995	0/0:26,0:26:78.27:0,78,1917	1/1:20,0:20:56.26:454,56,0	1/1:16,0:16:44.78:341,45,0	0/0:13,0:13:39.13:0,39,945	0/0:10,0:10:30.10:0,30,739	1/1:11,3:14:38.82:321,39,0	1/1:21,1:22:65.66:504,66,0	1/1:3,2:5:9:102,9,0	0/0:26,0:26:78.25:0,78,1848	0/0:20,0:20:60.21:0,60,1469	0/0:10,0:10:30.10:0,30,733	0/0:19,0:19:57.18:0,57,1336	1/1:15,1:16:47.76:381,48,0	1/1:29,0:28:80.31:612,80,0	1/1:7,0:7:20.90:158,21,0
chr10	100950692	.	AAATAT	A	6954.49	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=17.777;DP=512;FS=0.763;HRun=0;HaplotypeScore=134.8331;InbreedingCoeff=0.9895;MQ=73.59;MQ0=0;MQRankSum=-16.338;QD=43.20;ReadPosRankSum=-0.749;VQSLOD=4.8607;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.20:0,57,1886	1/1:0,8:8:24.08:372,24,0	0/0:16,0:16:45.62:0,46,1268	0/0:8,0:9:21.11:0,21,369	0/0:28,0:28:84.29:0,84,2758	0/0:24,0:24:72.25:0,72,2253	0/0:14,0:14:42.14:0,42,1351	1/1:6,15:21:61.23:848,61,0	0/0:15,0:15:45.15:0,45,1451	0/0:35,0:35:99:0,105,3447	0/0:16,0:16:48.16:0,48,1599	0/0:24,0:24:72.25:0,72,2374	0/0:28,0:28:84.29:0,84,2731	0/0:26,0:26:78.27:0,78,2583	1/1:3,18:21:63.18:926,63,0	1/1:0,15:16:43.37:698,43,0	0/0:13,0:13:39.13:0,39,1276	0/0:10,0:10:30.10:0,30,974	1/1:3,11:14:38.58:573,39,0	1/1:2,21:23:69.12:1023,69,0	1/1:2,3:5:8.96:108,9,0	0/0:25,0:25:75.26:0,75,2332	0/0:20,0:20:60.21:0,60,1917	0/0:10,0:10:30.10:0,30,967	0/0:19,0:19:57.20:0,57,1779	1/1:2,15:17:51.17:786,51,0	1/1:1,28:29:87.12:1287,87,0	1/1:0,7:7:21.07:335,21,0
chr10	100951061	.	TG	T	5669.49	PASS	AB=0.525;AC=19;AF=0.339;AN=56;BaseQRankSum=12.225;DP=531;FS=17.806;HRun=5;HaplotypeScore=51.2620;InbreedingCoeff=0.8998;MQ=78.15;MQ0=0;MQRankSum=-4.209;QD=28.49;ReadPosRankSum=0.716;VQSLOD=3.0188;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.23:0,78,1033	1/1:0,9:8:21.06:238,21,0	0/0:17,0:18:44.80:0,45,599	0/0:12,0:12:30.40:0,30,378	0/0:43,0:43:99:0,123,1650	0/0:23,0:23:63.21:0,63,861	0/0:17,0:17:51.16:0,51,681	1/1:4,25:29:72.19:805,72,0	0/0:15,0:15:42.14:0,42,574	0/0:22,0:22:63.20:0,63,846	0/0:24,0:24:66.17:0,66,856	0/0:11,0:11:33.10:0,33,437	0/0:15,0:15:45.15:0,45,615	0/0:12,0:12:36.12:0,36,490	1/1:0,20:20:54.15:612,54,0	1/1:1,16:17:7.11:469,7,0	0/0:13,0:13:36.12:0,36,492	0/0:10,0:10:24.06:0,24,311	1/1:1,10:11:30.08:340,30,0	1/1:2,35:37:96.27:1085,96,0	1/1:2,8:10:18.05:204,18,0	0/0:13,0:13:39.13:0,39,532	0/0:25,0:25:66.22:0,66,901	0/0:4,0:4:12.04:0,12,164	0/0:28,0:28:78.24:0,78,1036	0/1:3,29:31:32.85:828,0,33	1/1:0,24:24:69.20:781,69,0	1/1:0,10:10:27.08:306,27,0
chr10	100951310	.	C	CTG	2298.15	PASS	AB=0.886;AC=15;AF=0.278;AN=54;BaseQRankSum=7.271;DP=593;FS=38.455;HRun=0;HaplotypeScore=118.0991;InbreedingCoeff=0.6819;MQ=47.10;MQ0=40;MQRankSum=-4.495;QD=11.91;ReadPosRankSum=0.646;VQSLOD=1.7002;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:36:66.05:0,66,928	./.	0/0:15,0:4:6.02:0,6,92	0/0:42,0:14:13.72:0,14,174	0/0:22,0:22:36.12:0,36,548	0/0:24,0:23:45.15:0,45,679	0/0:19,0:19:42.14:0,42,641	0/1:18,3:18:85.53:268,0,86	0/0:22,0:21:51.13:0,51,717	0/0:21,0:21:57.18:0,57,832	0/0:13,0:13:21.07:0,21,321	0/0:27,0:25:33.11:0,33,503	0/0:21,0:21:57.19:0,57,865	0/0:22,0:21:45.15:0,45,686	1/1:21,4:20:14.82:171,15,0	1/1:21,3:19:19.91:210,20,0	0/0:30,0:28:63.07:0,63,864	0/0:21,0:21:57.19:0,57,868	1/1:23,5:22:21.87:547,22,0	1/1:15,4:16:26.44:287,26,0	1/1:28,1:24:32.81:374,33,0	0/0:11,0:10:5.83:0,6,91	0/0:14,0:14:18.06:0,18,274	0/0:18,0:16:27.09:0,27,413	0/0:14,0:14:36.10:0,36,510	0/1:23,0:20:99:317,0,142	0/1:13,5:14:1.81:213,0,2	1/1:6,0:6:2.14:93,2,0
chr10	100951314	.	CTG	C	2661.09	PASS	AB=0.703;AC=14;AF=0.259;AN=54;BaseQRankSum=10.187;DP=577;FS=36.395;HRun=0;HaplotypeScore=115.1466;InbreedingCoeff=0.5244;MQ=46.33;MQ0=39;MQRankSum=-5.204;QD=14.54;ReadPosRankSum=0.540;VQSLOD=1.7729;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:35:57.19:0,57,1022	./.	0/0:12,0:3:6.02:0,6,77	0/0:34,0:11:9.95:0,10,182	0/0:25,0:25:39.11:0,39,713	0/0:24,0:24:51.10:0,51,873	0/0:19,0:19:41.98:0,42,800	0/1:14,5:16:99:263,0,169	0/0:20,0:19:48.12:0,48,855	0/0:22,0:22:54.76:0,55,981	0/0:14,0:14:24.03:0,24,388	0/0:26,0:24:33.11:0,33,555	0/0:24,0:24:69.13:0,69,1128	0/0:22,0:21:48.13:0,48,854	1/1:9,14:18:15.05:210,15,0	1/1:11,12:18:21.07:308,21,0	0/0:29,0:27:57.19:0,57,1013	0/0:24,0:24:63.11:0,63,1084	1/1:11,13:18:4.26:597,4,0	1/1:7,11:15:27.05:346,27,0	1/1:6,22:22:27.08:362,27,0	0/0:11,0:10:6.02:0,6,95	0/0:14,0:14:18.06:0,18,281	0/0:18,0:16:6.14:0,6,441	0/0:12,0:12:36.07:0,36,604	0/1:14,9:20:99:306,0,285	0/1:11,7:14:37.81:235,0,38	0/1:2,5:7:29.32:210,0,29
chr10	100951324	.	G	GTCTC	1032.45	PASS	AC=18;AF=0.346;AN=52;BaseQRankSum=12.013;DP=545;FS=58.676;HRun=0;HaplotypeScore=127.8347;InbreedingCoeff=0.8690;MQ=43.55;MQ0=42;MQRankSum=-6.984;QD=5.83;ReadPosRankSum=-1.184;VQSLOD=0.1730;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:29:45.15:0,45,800	./.	./.	0/0:17,0:4:9.02:0,9,130	0/0:28,0:26:39.09:0,39,667	0/0:24,0:24:50.94:0,51,843	0/0:21,0:19:42.11:0,42,707	1/1:16,0:14:7.04:26,7,0	0/0:20,0:19:50.78:0,51,879	0/0:22,0:22:60.05:0,60,993	0/0:12,0:12:18.04:0,18,308	0/0:27,0:23:21.07:0,21,386	0/0:27,0:27:72.07:0,72,1130	0/0:23,0:22:48.10:0,48,797	1/1:26,2:22:8.28:52,8,0	1/1:18,2:16:15.69:130,16,0	0/0:30,0:28:25.44:0,25,894	0/0:21,0:20:56.89:0,57,969	1/1:19,1:14:10.91:106,11,0	1/1:17,1:14:11.77:57,12,0	1/1:24,0:17:13.19:59,13,0	0/0:11,0:10:1.71:0,2,34	0/0:12,0:12:9.03:0,9,132	0/0:15,0:13:18.06:0,18,331	0/0:11,0:11:30.03:0,30,467	1/1:24,0:21:2.67:318,3,0	1/1:15,3:14:23.70:344,24,0	1/1:9,0:8:21.44:131,21,0
chr10	100951340	.	GTC	G	151.65	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=1.701;DP=500;FS=3.535;HRun=0;HaplotypeScore=112.7203;InbreedingCoeff=0.6353;MQ=41.64;MQ0=39;MQRankSum=-1.966;QD=3.45;ReadPosRankSum=1.566;VQSLOD=2.5968;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:25:30.05:0,30,473	./.	./.	0/0:9,0:2:3:0,3,26	0/0:31,0:28:39.12:0,39,611	0/0:24,0:24:45.15:0,45,745	0/0:20,0:15:12.04:0,12,200	0/0:18,0:15:29.68:0,30,248	0/0:24,0:23:60.20:0,60,991	0/0:17,0:17:39.10:0,39,629	0/0:10,0:10:15.05:0,15,251	1/1:3,21:20:5.17:182,5,0	0/0:26,0:26:66.21:0,66,1085	0/0:23,0:22:44.36:0,44,683	0/0:28,0:23:5.98:0,6,54	0/0:19,0:15:10.70:0,11,107	0/0:31,0:29:62.34:0,62,889	0/0:22,0:21:49.41:0,49,816	0/0:17,0:10:16.29:0,16,175	0/0:15,0:13:11.95:0,12,119	0/0:20,0:11:6.02:0,6,66	0/0:4,7:10:0:0,0,0	1/1:2,5:7:3.01:39,3,0	1/1:9,4:11:3.01:39,3,0	0/0:12,0:12:24.03:0,24,358	0/0:19,0:16:30.59:0,31,244	0/0:16,0:14:27.67:0,28,213	0/0:9,0:8:21.02:0,21,214
chr10	100951374	.	GTC	G	105.54	PASS	AB=0.984;AC=10;AF=0.192;AN=52;BaseQRankSum=4.452;DP=468;FS=0.000;HRun=0;HaplotypeScore=82.8621;InbreedingCoeff=0.4899;MQ=37.50;MQ0=40;MQRankSum=-2.610;QD=1.23;ReadPosRankSum=-2.773;VQSLOD=1.0810;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,6:23:11.99:151,12,0	1/1:4,0:3:1.47:4,1,0	0/0:5,0:1:2.04:0,2,6	0/1:30,1:3:0:1,0,0	0/0:29,0:28:27.08:0,27,425	0/0:24,0:23:30.07:0,30,443	0/0:14,0:8:6.01:0,6,91	0/0:26,0:17:36.12:0,36,518	0/0:20,0:19:45.14:0,45,720	0/0:20,0:20:48.01:0,48,675	0/0:10,0:10:12.03:0,12,174	0/0:10,10:16:2.94:0,3,18	0/0:22,0:22:51.12:0,51,795	0/0:17,0:15:18.05:0,18,275	0/0:28,0:17:0:0,0,0	0/0:11,0:7:3.01:0,3,35	0/0:29,0:28:51.55:0,52,967	0/0:15,0:13:30.54:0,31,471	0/0:15,0:6:12.02:0,12,128	0/0:12,0:10:3.01:0,3,32	./.	1/1:4,1:4:3.01:35,3,0	./.	1/1:13,1:11:2.22:7,2,0	0/0:10,0:10:24.08:0,24,370	0/0:23,0:17:26.87:0,27,341	0/0:15,0:13:7.59:0,8,143	0/1:6,0:5:24.25:24,0,67
chr10	100951398	.	GTC	G	543.77	PASS	AB=0.684;AC=16;AF=0.308;AN=52;BaseQRankSum=4.174;DP=520;FS=15.809;HRun=0;HaplotypeScore=66.4254;InbreedingCoeff=0.5874;MQ=32.73;MQ0=68;MQRankSum=-4.782;QD=4.94;ReadPosRankSum=-1.418;VQSLOD=0.8070;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:19:2.15:13,2,0	1/1:1,1:2:2.92:26,3,0	0/0:54,0:2:4.83:0,5,56	0/0:88,0:10:8.01:0,8,117	0/0:28,0:27:12.04:0,12,204	0/0:21,0:19:16.85:0,17,238	0/0:21,0:16:18.05:0,18,297	0/1:8,13:13:12.55:208,0,13	0/0:19,0:17:27.27:0,27,497	0/0:19,0:19:50.89:0,51,683	0/0:9,0:9:6.02:0,6,102	0/0:15,0:11:6.28:0,6,30	0/0:17,0:17:36.12:0,36,610	0/0:14,0:11:12.04:0,12,196	0/0:10,7:9:0:0,0,0	0/1:4,2:3:0.09:30,0,0	0/0:29,0:27:19.36:0,19,748	0/0:14,0:12:25.90:0,26,400	1/1:7,3:4:8.92:94,9,0	0/0:4,4:7:0.47:0,0,1	./.	0/0:7,0:7:2.66:0,3,7	./.	1/1:19,0:9:2.22:7,2,0	0/0:14,0:13:21.07:0,21,357	1/1:12,5:11:11.96:124,12,0	1/1:3,4:7:11.99:130,12,0	1/1:5,2:5:5.17:68,5,0
chr10	100951460	.	TCTCTC	T	522.13	PASS	AC=14;AF=0.269;AN=52;BaseQRankSum=-2.204;DP=425;FS=48.070;HRun=0;HaplotypeScore=108.9579;InbreedingCoeff=0.7943;MQ=47.27;MQ0=69;MQRankSum=-4.147;QD=6.07;ReadPosRankSum=-1.202;VQSLOD=0.0955;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:32.58:0,33,326	0/0:1,4:4:0:0,0,0	0/0:28,0:9:24.01:0,24,257	0/0:23,0:10:5.08:0,5,233	0/0:21,0:20:27.06:0,27,337	0/0:17,0:16:33.10:0,33,492	0/0:17,0:14:27.90:0,28,337	1/1:5,0:3:9.02:96,9,0	0/0:10,0:7:0.76:0,1,184	0/0:16,0:15:43.93:0,44,760	0/0:8,0:8:15.05:0,15,186	0/0:26,0:22:51.13:0,51,881	0/0:12,0:11:9.11:0,9,462	0/0:17,0:17:26.92:0,27,364	./.	1/1:13,0:4:6:56,6,0	0/0:24,0:22:50.29:0,50,620	0/0:8,0:7:16.47:0,16,199	1/1:12,0:5:11.99:126,12,0	1/1:19,0:7:8.26:93,8,0	./.	0/0:25,0:24:53.76:0,54,831	0/0:18,0:17:39.12:0,39,485	0/0:14,0:10:17.99:0,18,253	0/0:12,0:12:30.08:0,30,360	1/1:18,0:4:3.27:76,3,0	1/1:12,0:4:9.02:96,9,0	1/1:7,0:5:14.99:146,15,0
chr10	100952697	.	GA	G	3589.61	PASS	AB=0.771;AC=20;AF=0.357;AN=56;BaseQRankSum=2.357;DP=458;FS=4.015;HRun=9;HaplotypeScore=56.7837;InbreedingCoeff=0.8649;MQ=67.48;MQ0=0;MQRankSum=-1.598;QD=21.12;ReadPosRankSum=1.777;VQSLOD=4.5892;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.01:0,60,672	1/1:0,5:5:15.01:137,15,0	0/0:8,0:9:14.87:0,15,145	0/1:12,1:13:0.17:0,0,232	0/0:19,0:19:51.08:0,51,557	0/0:16,0:16:42.08:0,42,470	0/0:19,0:19:48.07:0,48,525	1/1:5,25:30:40.41:619,40,0	0/0:14,0:14:36.11:0,36,415	0/0:23,0:24:66.03:0,66,741	0/0:17,0:17:48.14:0,48,553	0/0:15,0:15:42.08:0,42,459	0/0:13,0:13:36.11:0,36,415	0/0:12,0:12:33.10:0,33,381	1/1:0,12:12:36.02:329,36,0	1/1:3,14:17:39.02:357,39,0	0/0:26,0:25:72.21:0,72,831	0/0:10,0:10:21.06:0,21,242	0/1:7,12:19:27.19:287,0,27	1/1:0,21:21:63.03:576,63,0	1/1:0,11:11:33.02:302,33,0	0/0:16,0:16:39.12:0,39,450	0/0:15,1:16:20.64:0,21,477	0/0:24,0:24:60.14:0,60,677	0/0:14,1:15:14.71:0,15,411	1/1:3,14:17:10.71:350,11,0	1/1:1,18:18:51.03:467,51,0	1/1:0,6:6:18.01:165,18,0
chr10	100952956	.	GACACACACACACAC	G	2406	PASS	AB=0.779;AC=22;AF=0.423;AN=52;BaseQRankSum=6.941;DP=489;FS=6.921;HRun=0;HaplotypeScore=172.7667;InbreedingCoeff=0.7017;MQ=65.76;MQ0=13;MQRankSum=-5.772;QD=13.08;ReadPosRankSum=0.108;VQSLOD=2.2112;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:24:0.47:1,0,0	1/1:2,0:6:3.01:98,3,0	./.	0/0:36,0:30:3.01:0,3,66	0/0:15,0:15:27.09:0,27,1496	0/0:14,0:15:17.94:0,18,863	0/0:16,0:19:18.06:0,18,836	./.	0/0:9,0:15:18.06:0,18,901	0/0:19,0:19:42.14:0,42,2206	0/0:13,0:15:24.08:0,24,1005	0/1:11,0:14:11.40:11,0,271	0/0:17,0:18:18.95:0,19,1030	0/0:10,0:9:15.05:0,15,760	1/1:12,0:22:21.07:555,21,0	1/1:14,7:19:15.05:571,15,0	0/0:18,0:21:33.07:0,33,1640	0/0:16,0:16:27.09:0,27,1355	1/1:8,1:10:4.83:213,5,0	1/1:8,9:17:12.04:462,12,0	1/1:22,7:29:3.01:79,3,0	0/1:7,0:10:0:0,0,0	0/0:15,0:19:8.98:0,9,88	0/0:19,0:26:18.19:0,18,371	0/0:15,0:16:21.07:0,21,831	1/1:8,8:16:12.02:228,12,0	1/1:5,4:10:9.03:324,9,0	1/1:4,0:4:3.01:41,3,0
chr10	100953141	.	A	AGT	3528.61	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=3.222;DP=639;FS=1.330;HRun=0;HaplotypeScore=145.1859;InbreedingCoeff=0.5778;MQ=66.82;MQ0=3;MQRankSum=-0.997;QD=13.68;ReadPosRankSum=1.809;VQSLOD=3.8487;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,14:25:35.83:583,36,0	1/1:2,10:12:27.09:436,27,0	0/0:33,0:21:30.35:0,30,353	0/0:33,0:28:45.69:0,46,491	0/0:25,0:25:53.75:0,54,628	0/0:27,0:27:60.17:0,60,720	0/0:21,0:21:51.14:0,51,611	0/1:27,0:27:7.28:114,0,7	0/0:19,0:19:48.15:0,48,586	0/0:40,0:40:93.29:0,93,1137	0/0:15,0:15:39.12:0,39,488	1/1:16,1:32:57.53:510,58,0	0/0:29,0:29:42.84:0,43,711	0/0:24,0:24:57.18:0,57,697	1/1:12,27:39:63.22:1020,63,0	0/0:21,0:21:2.93:0,3,73	0/0:33,0:33:72.15:0,72,837	0/0:22,0:22:32.71:0,33,583	0/1:17,0:17:9.44:9,0,62	0/1:13,0:13:3.20:3,0,47	1/1:13,0:13:1.13:60,1,0	1/1:3,0:13:23.97:207,24,0	1/1:9,0:17:37.99:328,38,0	1/1:11,0:18:20.74:172,21,0	0/0:34,0:34:72.22:0,72,872	0/1:20,0:20:13.95:14,0,71	0/1:11,0:11:38.21:71,0,38	0/0:4,0:4:2.26:0,2,21
chr10	100953146	.	GTGTGTGTGTGTATGTT	G	6270.18	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=6.234;DP=618;FS=1.484;HRun=0;HaplotypeScore=283.4283;InbreedingCoeff=0.7838;MQ=62.85;MQ0=5;MQRankSum=-7.727;QD=38.47;ReadPosRankSum=-1.544;VQSLOD=3.6789;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:38.83:0,39,1755	0/0:11,0:11:27.09:0,27,1725	0/0:36,0:21:40.32:0,40,1046	0/0:38,0:27:38.23:0,38,1776	0/0:23,0:23:57.19:0,57,2964	0/0:26,0:26:62.91:0,63,3832	0/0:23,0:23:60.19:0,60,3500	1/1:26,0:26:6.89:510,7,0	0/0:19,0:19:48.16:0,48,3167	0/0:37,0:37:99:0,102,6793	0/0:14,0:14:39.13:0,39,2675	0/1:32,0:31:12.97:13,0,2434	0/0:23,0:23:42.86:0,43,3743	0/0:22,0:22:59.47:0,59,3923	0/0:37,0:37:69.03:0,69,3549	1/1:7,10:17:33.11:1370,33,0	0/0:34,0:34:81.24:0,81,4738	0/0:21,0:21:55.71:0,56,2917	1/1:8,7:14:28.64:1011,29,0	1/1:6,6:12:30.09:934,30,0	1/1:9,2:11:8.68:124,9,0	0/0:16,0:16:29.90:0,30,1413	0/1:17,0:17:17.85:18,0,1250	0/0:17,0:17:4.12:0,4,959	0/0:32,0:32:75.20:0,75,4521	1/1:12,7:19:33.04:1106,33,0	1/1:5,5:10:24.08:850,24,0	1/1:2,2:4:9.03:336,9,0
chr10	100953188	.	GTGGGTA	G	878.26	PASS	AB=0.996;AC=12;AF=0.214;AN=56;BaseQRankSum=9.084;DP=637;FS=1.740;HRun=0;HaplotypeScore=229.8024;InbreedingCoeff=-0.1046;MQ=50.28;MQ0=10;MQRankSum=-9.548;QD=4.77;ReadPosRankSum=-2.857;VQSLOD=2.2279;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:5.12:0,5,404	0/0:11,0:11:30.10:0,30,789	0/0:36,0:15:30.82:0,31,402	0/0:42,0:11:15.03:0,15,407	0/0:20,0:20:57.15:0,57,1727	0/0:24,0:24:69.09:0,69,1965	0/0:28,0:28:84.28:0,84,2394	0/1:17,0:16:99:144,0,181	0/0:19,0:19:56.37:0,56,1491	0/0:39,0:39:99:0,114,3294	0/0:17,0:17:48.10:0,48,1260	0/1:34,0:33:31.80:32,0,1151	0/0:26,0:26:75.26:0,75,2315	0/0:34,0:34:96.11:0,96,2804	0/0:39,0:39:93.70:0,94,1846	0/1:22,1:23:70.51:92,0,71	0/0:27,0:27:78.27:0,78,2550	0/1:18,0:18:7.96:8,0,1260	0/1:17,0:16:24.32:24,0,322	0/1:9,0:9:43.63:44,0,47	0/1:19,0:19:20.90:21,0,41	0/0:20,0:20:5.74:0,6,306	0/1:13,0:13:41.52:42,0,194	0/0:15,0:15:24.25:0,24,355	0/0:26,0:26:66.97:0,67,1856	1/1:14,3:17:6.59:419,7,0	0/1:12,0:12:99:143,0,114	0/1:5,0:5:30.32:61,0,30
chr10	100953194	.	ATGTGTG	A	2922.60	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=7.172;DP=662;FS=1.014;HRun=0;HaplotypeScore=231.8720;InbreedingCoeff=0.9528;MQ=50.19;MQ0=9;MQRankSum=-9.123;QD=23.38;ReadPosRankSum=-2.681;VQSLOD=2.9509;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:29:29.04:0,29,312	0/0:8,0:14:36.11:0,36,787	0/0:36,0:14:7.97:0,8,123	0/0:43,0:10:9.03:0,9,132	0/0:22,0:22:51.17:0,51,1603	0/0:22,0:24:59.67:0,60,1648	0/0:28,0:28:69.24:0,69,2083	1/1:8,12:20:36.07:592,36,0	0/0:20,0:20:45.08:0,45,1272	0/0:39,0:40:96.30:0,96,2641	0/0:18,0:18:32.47:0,32,984	0/0:21,0:32:38.09:0,38,983	0/0:30,0:31:75.26:0,75,2314	0/0:30,0:32:81.06:0,81,2420	0/0:24,0:41:77.54:0,78,1581	1/1:7,15:22:44.87:577,45,0	0/0:27,0:27:75.26:0,75,2335	0/0:17,0:18:44.75:0,45,1236	1/1:16,3:18:23.94:321,24,0	1/1:6,2:8:17.90:205,18,0	1/1:10,9:19:8.93:105,9,0	0/0:14,0:22:25.35:0,25,309	0/0:13,0:15:11.97:0,12,204	0/0:14,0:17:18.34:0,18,260	0/0:25,0:25:60.18:0,60,1635	1/1:11,8:19:32.33:762,32,0	1/1:6,6:12:18.06:361,18,0	1/1:2,3:5:11.63:203,12,0
chr10	100954452	.	GCATACACATACACATACA	G	1874.34	PASS	AB=0.947;AC=12;AF=0.222;AN=54;BaseQRankSum=6.584;DP=623;FS=9.904;HRun=0;HaplotypeScore=271.6027;InbreedingCoeff=0.2268;MQ=49.85;MQ0=61;MQRankSum=-2.660;QD=8.41;ReadPosRankSum=-4.070;VQSLOD=0.6449;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:9.45:0,9,73	1/1:10,0:10:12.33:139,12,0	0/0:32,0:1:2.37:0,2,8	./.	0/0:20,0:20:42.11:0,42,1129	0/0:27,0:27:48.13:0,48,1474	0/0:15,0:12:17.73:0,18,502	1/1:37,27:38:50.84:488,51,0	0/0:24,0:24:66.17:0,66,1721	0/0:20,0:20:48.15:0,48,1497	0/0:16,0:16:29.96:0,30,758	0/0:15,0:15:0.14:0,0,172	0/0:29,0:28:66.21:0,66,1843	0/0:20,0:20:54.15:0,54,1413	1/1:19,0:19:18.99:276,19,0	0/1:14,0:10:24.12:24,0,108	0/0:27,0:27:43.57:0,44,1388	0/0:25,0:25:51.16:0,51,1304	0/1:13,0:8:68.96:69,0,91	0/1:20,0:16:35.50:36,0,119	0/1:32,0:26:99:451,0,233	0/0:5,0:21:1.58:0,2,22	0/0:7,0:15:3.46:0,3,24	0/0:11,0:11:17.52:0,18,260	0/0:21,0:21:48.13:0,48,1158	0/1:15,13:23:99:352,0,202	0/1:23,0:21:99:198,0,235	0/0:4,0:8:3.01:0,3,48
chr10	100955889	.	TGTAA	T	4276.16	PASS	AB=0.955;AC=24;AF=0.429;AN=56;BaseQRankSum=15.067;DP=705;FS=8.879;HRun=0;HaplotypeScore=139.2032;InbreedingCoeff=0.1953;MQ=58.15;MQ0=13;MQRankSum=3.040;QD=9.16;ReadPosRankSum=-1.229;VQSLOD=3.6074;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:70.60:71,0,218	0/0:6,0:6:8.99:0,9,77	0/0:25,0:11:27:0,27,273	0/0:17,0:7:12.74:0,13,162	0/1:31,0:31:80.16:80,0,335	0/0:25,0:25:72.10:0,72,1229	0/0:12,0:12:36.06:0,36,422	1/1:9,27:35:2.95:450,3,0	0/0:19,0:19:28.98:0,29,850	0/0:35,0:33:43.34:0,43,1055	0/1:29,0:29:8.67:9,0,812	0/1:26,0:26:99:140,0,111	0/1:24,0:24:41.20:41,0,309	0/0:31,0:31:93.10:0,93,1507	0/1:29,0:28:15.91:16,0,260	1/1:1,27:28:15.05:279,15,0	0/0:31,0:31:86.77:0,87,984	0/0:23,0:22:4.97:0,5,753	1/1:3,14:16:40.87:421,41,0	1/1:0,43:43:76.99:670,77,0	1/1:0,18:18:18.06:340,18,0	0/1:29,0:29:48.19:48,0,242	0/1:18,0:18:57.50:57,0,232	0/1:22,0:22:69.21:69,0,101	0/0:14,0:14:42.11:0,42,897	0/1:8,33:40:42.27:1072,0,42	1/1:1,39:40:27.07:456,27,0	1/1:1,4:5:3.01:57,3,0
chr10	100955893	.	AGTAT	A	3621.63	PASS	AB=0.848;AC=28;AF=0.538;AN=52;BaseQRankSum=8.609;DP=705;FS=15.901;HRun=0;HaplotypeScore=144.8801;InbreedingCoeff=0.7413;MQ=58.12;MQ0=14;MQRankSum=-1.283;QD=9.08;ReadPosRankSum=1.001;VQSLOD=1.9557;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,4:28:16.99:247,17,0	0/0:5,0:5:2.99:0,3,25	./.	./.	1/1:16,16:32:39.23:436,39,0	0/0:24,0:24:45.15:0,45,992	0/0:14,0:14:27.04:0,27,438	0/0:37,0:34:2.94:0,3,18	0/0:20,0:20:39.13:0,39,854	0/0:21,0:38:28.08:0,28,699	0/0:14,0:29:11.97:0,12,497	1/1:6,24:30:30.10:464,30,0	1/1:16,8:24:18.02:252,18,0	0/0:32,0:32:48.16:0,48,1046	1/1:13,0:29:14.79:115,15,0	1/1:27,0:27:15.04:161,15,0	0/0:32,0:32:30.04:0,30,562	0/0:21,0:20:24.08:0,24,556	1/1:18,0:17:9.93:100,10,0	1/1:43,0:43:15.04:165,15,0	1/1:19,0:19:18.05:191,18,0	1/1:12,16:28:38.62:378,39,0	0/1:9,7:16:52.34:214,0,52	1/1:8,14:22:15.05:232,15,0	0/0:16,0:16:39.12:0,39,833	0/1:38,0:37:36.48:382,0,36	1/1:40,0:40:23.47:252,23,0	1/1:4,0:4:3.01:33,3,0
chr10	100959575	.	G	GC	16025.97	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-18.082;DP=646;FS=9.152;HRun=0;HaplotypeScore=54.0813;InbreedingCoeff=0.9984;MQ=81.78;MQ0=0;MQRankSum=-2.848;QD=43.55;ReadPosRankSum=1.056;VQSLOD=4.9472;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:22:57.18:886,57,0	1/1:0,7:7:21.07:335,21,0	0/0:14,0:14:39.42:0,39,469	0/0:20,0:20:51.15:0,51,678	0/0:30,0:30:90.30:0,90,1258	0/0:26,0:26:78.26:0,78,1088	0/0:21,0:21:60.20:0,60,839	1/1:2,44:46:99:2069,132,0	0/0:27,0:27:81.27:0,81,1132	0/0:23,0:23:66.21:0,66,907	0/0:17,0:17:51.17:0,51,712	1/1:0,30:30:84.29:1339,84,0	0/0:26,0:26:78.26:0,78,1090	0/0:25,0:25:75.25:0,75,1037	1/1:1,21:22:57.19:910,57,0	1/1:0,37:37:99:1628,102,0	0/0:13,0:13:39.13:0,39,543	0/0:9,0:9:27.09:0,27,378	1/1:1,19:20:57.19:907,57,0	1/1:0,26:26:72.25:1148,72,0	1/1:0,24:24:72.25:1149,72,0	1/1:0,9:9:24.08:383,24,0	1/1:2,22:24:60.20:957,60,0	1/1:0,23:23:60.20:958,60,0	0/0:27,0:27:81.25:0,81,1099	1/1:1,37:38:69.42:1681,69,0	1/1:2,31:33:84.29:1340,84,0	1/1:0,7:7:21.07:335,21,0
chr10	100960108	.	G	GA	2995.43	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-8.492;DP=640;FS=7.777;HRun=7;HaplotypeScore=61.8452;InbreedingCoeff=0.9600;MQ=66.85;MQ0=1;MQRankSum=0.114;QD=29.66;ReadPosRankSum=2.468;VQSLOD=4.2623;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:63.15:745,63,0	0/0:9,0:9:27.04:0,27,261	0/0:17,0:15:3.24:0,3,231	0/0:19,0:16:22.96:0,23,282	0/0:30,0:30:78.12:0,78,753	0/0:27,0:27:81.12:0,81,776	0/0:23,0:23:63.10:0,63,608	0/0:25,0:25:66.08:0,66,631	0/0:20,0:20:57.05:0,57,534	0/0:35,0:35:84.11:0,84,808	0/0:29,0:29:81.11:0,81,776	1/1:2,17:19:48.15:580,48,0	0/0:22,0:22:59.46:0,59,578	0/0:14,0:14:42.06:0,42,400	0/0:26,0:26:75.12:0,75,724	0/0:24,0:24:69.10:0,69,661	0/0:30,0:30:84.13:0,84,811	0/0:26,0:25:66.05:0,66,626	0/0:24,0:24:69.10:0,69,662	0/0:30,0:30:81.12:0,81,782	0/0:18,0:18:45.07:0,45,435	1/1:1,21:22:60.18:725,60,0	1/1:3,20:24:60.18:722,60,0	1/1:2,12:14:33.10:399,33,0	0/0:28,0:28:78.12:0,78,753	0/0:30,0:30:69.07:0,69,658	0/0:25,0:25:72.11:0,72,695	0/0:7,0:7:21.03:0,21,203
chr10	100960935	.	T	TG	699.18	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=3.104;DP=556;FS=5.213;HRun=1;HaplotypeScore=80.8008;InbreedingCoeff=0.8035;MQ=73.95;MQ0=4;MQRankSum=1.155;QD=7.68;ReadPosRankSum=0.626;VQSLOD=0.8652;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,1:11:17.91:177,18,0	0/0:6,0:7:20.18:0,20,154	0/1:25,0:12:7.51:8,0,145	0/0:22,0:18:19.29:0,19,222	0/0:34,0:33:88.18:0,88,848	0/0:22,0:22:55.44:0,55,529	0/0:8,0:8:4.49:0,4,154	0/0:26,0:28:80.87:0,81,760	0/0:25,0:25:72.06:0,72,625	0/0:29,0:29:60.95:0,61,618	0/0:24,0:24:66.15:0,66,593	1/1:10,0:10:6.90:70,7,0	0/0:17,0:18:50.93:0,51,458	0/0:19,0:19:48:0,48,454	0/0:20,0:21:63:0,63,560	0/0:15,0:18:44.95:0,45,441	0/0:19,0:19:45.84:0,46,417	0/0:7,0:7:19.52:0,20,170	0/0:22,0:22:59.85:0,60,559	0/0:38,0:38:99:0,101,976	0/0:10,0:10:30:0,30,283	1/1:2,8:10:17.38:154,17,0	1/1:10,18:28:5.63:310,6,0	1/1:6,0:6:14.04:144,14,0	0/0:27,0:27:69.18:0,69,820	0/0:31,0:31:87.10:0,87,852	0/0:33,0:32:87.80:0,88,785	0/0:3,0:3:9.01:0,9,90
chr10	100961508	.	CAA	C	3469.60	PASS	AB=0.571;AC=23;AF=0.411;AN=56;BaseQRankSum=8.661;DP=582;FS=1.592;HRun=14;HaplotypeScore=89.3327;InbreedingCoeff=0.8742;MQ=70.14;MQ0=3;MQRankSum=-1.655;QD=14.10;ReadPosRankSum=6.635;VQSLOD=2.7833;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:16:38.48:0,38,478	0/0:17,0:18:50.66:0,51,677	0/0:23,0:12:19.53:0,20,243	0/0:20,0:10:7.68:0,8,124	0/0:39,0:44:99:0,103,1186	0/0:21,1:26:34.39:0,34,703	0/0:11,0:14:38.08:0,38,448	1/1:9,22:34:58.91:544,59,0	0/0:17,0:20:56.16:0,56,711	0/0:20,0:23:49.15:0,49,583	0/0:20,0:21:56.68:0,57,760	1/1:2,0:15:27.28:117,27,0	0/0:18,1:19:23.13:0,23,598	0/0:21,0:21:40.14:0,40,623	0/0:16,0:16:44.60:0,45,545	1/1:1,16:17:42.03:389,42,0	0/0:11,0:11:30.04:0,30,345	0/0:16,1:18:5.32:0,5,318	1/1:8,11:22:5.15:242,5,0	1/1:6,16:23:41.64:373,42,0	1/1:2,9:12:20.65:217,21,0	1/1:3,1:20:43.39:199,43,0	1/1:5,0:30:54.92:252,55,0	1/1:2,0:14:22.14:95,22,0	0/0:21,0:24:49.61:0,50,594	0/1:7,19:28:55.28:401,0,55	1/1:3,20:23:54.01:499,54,0	1/1:0,6:8:11.58:142,12,0
chr10	100962053	.	AG	A	7297.04	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=11.363;DP=535;FS=12.975;HRun=7;HaplotypeScore=54.9174;InbreedingCoeff=0.9616;MQ=87.98;MQ0=0;MQRankSum=-2.803;QD=25.51;ReadPosRankSum=2.223;VQSLOD=4.5662;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:36:96.22:979,96,0	1/1:1,3:4:9.02:92,9,0	0/0:23,0:22:50.69:0,51,611	0/0:18,0:18:35.34:0,35,373	0/0:17,0:17:48.15:0,48,600	0/0:20,0:20:57.17:0,57,704	0/0:20,0:20:60.19:0,60,755	1/1:2,27:29:78.10:766,78,0	0/0:21,0:21:54.17:0,54,679	0/0:27,0:27:66.21:0,66,826	0/0:16,0:16:42.11:0,42,502	1/1:5,15:20:36.08:367,36,0	0/0:16,0:16:45.13:0,45,554	0/0:20,0:20:54.15:0,54,653	1/1:1,23:24:60.14:612,60,0	1/1:4,17:21:54.12:548,54,0	0/0:30,0:30:87.26:0,87,1080	0/0:3,0:3:6.02:0,6,75	1/1:3,18:21:54.12:551,54,0	1/1:4,13:17:36.08:367,36,0	1/1:4,18:21:48.10:490,48,0	1/1:2,15:17:45.10:459,45,0	1/1:2,18:20:60.14:611,60,0	1/1:3,16:19:45.10:459,45,0	0/0:18,0:18:51.16:0,51,641	1/1:1,17:18:16.37:476,16,0	1/1:1,15:16:45.10:459,45,0	1/1:0,2:2:6.01:61,6,0
chr10	100962312	.	TA	T	9894.81	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=10.889;DP=594;FS=13.231;HRun=5;HaplotypeScore=59.9132;InbreedingCoeff=0.9991;MQ=84.42;MQ0=0;MQRankSum=-1.710;QD=30.54;ReadPosRankSum=0.976;VQSLOD=4.3570;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:39.11:442,39,0	1/1:0,12:12:33.09:374,33,0	0/0:18,0:18:39.10:0,39,504	0/0:20,0:20:47.94:0,48,603	0/0:30,0:30:90.28:0,90,1200	0/0:37,0:37:99:0,105,1404	0/0:21,0:21:57.19:0,57,780	1/1:1,26:27:78.22:884,78,0	0/0:18,0:18:51.16:0,51,681	0/0:22,0:22:63.21:0,63,862	0/0:18,0:18:54.18:0,54,738	1/1:1,25:26:72.21:817,72,0	0/0:19,0:19:54.18:0,54,738	0/0:20,0:20:60.20:0,60,821	1/1:1,15:16:45.13:511,45,0	1/1:0,21:21:51.15:579,51,0	0/0:16,0:16:44.96:0,45,615	0/0:8,0:8:21.07:0,21,287	1/1:1,21:22:63.18:715,63,0	1/1:1,29:30:78.22:885,78,0	1/1:1,17:18:48.14:545,48,0	1/1:2,24:26:72.21:817,72,0	1/1:0,26:26:78.22:885,78,0	1/1:0,18:18:42.12:476,42,0	0/0:23,0:23:60.20:0,60,818	1/1:2,21:23:25.14:674,25,0	1/1:1,28:29:78.22:885,78,0	1/1:0,12:12:36.10:408,36,0
chr10	100962479	.	G	GTCTGTCTATCTA	3444.65	PASS	AB=0.770;AC=18;AF=0.321;AN=56;BaseQRankSum=-0.057;DP=656;FS=1.565;HRun=0;HaplotypeScore=201.2421;InbreedingCoeff=0.2782;MQ=60.94;MQ0=8;MQRankSum=-2.983;QD=10.28;ReadPosRankSum=-3.870;VQSLOD=1.3360;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:18.80:511,19,0	0/0:7,0:10:22.23:0,22,180	0/1:21,0:14:1.79:2,0,227	0/0:9,0:7:14.21:0,14,175	0/0:40,0:39:99:0,114,2188	0/0:14,0:14:39.03:0,39,828	0/0:13,0:12:35.98:0,36,579	0/1:58,0:57:91.61:92,0,807	0/0:11,0:26:52.80:0,53,371	0/0:32,0:32:91.73:0,92,1501	0/0:24,0:24:63.03:0,63,1051	1/1:0,16:24:9.03:549,9,0	0/0:20,0:20:60.05:0,60,1202	0/0:18,0:18:53.99:0,54,730	0/0:12,0:21:44.17:0,44,321	0/0:24,0:25:71.93:0,72,1472	0/0:23,0:22:17.51:0,18,871	0/0:19,0:19:52.17:0,52,919	0/1:8,0:16:99:307,0,143	0/1:11,0:26:99:303,0,227	0/1:18,0:25:39.36:39,0,177	1/1:22,0:22:44.80:669,45,0	1/1:1,17:30:2.23:194,2,0	1/1:1,20:26:2.96:22,3,0	0/0:26,0:26:44.11:0,44,1484	0/1:12,0:21:99:465,0,260	0/1:14,0:29:99:162,0,267	0/1:8,0:13:99:131,0,142
chr10	100963943	.	AT	A	6856.03	PASS	AB=0.625;AC=25;AF=0.446;AN=56;BaseQRankSum=15.035;DP=587;FS=2.712;HRun=9;HaplotypeScore=82.9488;InbreedingCoeff=0.9395;MQ=79.40;MQ0=0;MQRankSum=-2.619;QD=22.63;ReadPosRankSum=0.501;VQSLOD=5.5683;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:56.95:511,57,0	0/0:14,0:14:33.10:0,33,381	0/0:20,0:20:27.83:0,28,492	0/0:12,0:12:32.58:0,33,304	0/0:35,0:35:90.21:0,90,1004	0/0:26,0:26:72.20:0,72,819	0/0:9,0:9:27.08:0,27,312	1/1:5,22:27:63.01:572,63,0	0/0:18,0:18:54.13:0,54,609	0/0:23,0:23:60.06:0,60,666	0/0:25,0:25:69.14:0,69,779	1/1:3,12:15:36.01:330,36,0	0/0:15,0:15:39.12:0,39,450	0/0:18,1:19:29.70:0,30,595	0/0:32,0:32:62.84:0,63,977	1/1:2,17:19:10.40:350,10,0	0/0:14,0:14:42.11:0,42,474	0/0:9,0:9:24.07:0,24,277	1/1:1,30:31:89.99:808,90,0	1/1:4,24:28:66.02:604,66,0	1/1:1,16:17:45.02:412,45,0	1/1:1,30:31:84.03:768,84,0	1/1:3,21:24:28.42:515,28,0	1/1:1,13:14:33.02:302,33,0	0/0:13,0:13:39.11:0,39,443	1/1:1,21:22:63.03:577,63,0	1/1:10,29:39:99:891,99,0	0/1:6,9:15:4.60:217,0,5
chr10	100964743	.	T	TTCC	4637.59	PASS	AB=0.700;AC=18;AF=0.321;AN=56;BaseQRankSum=-5.833;DP=593;FS=3.559;HRun=0;HaplotypeScore=110.3262;InbreedingCoeff=0.7706;MQ=65.73;MQ0=7;MQRankSum=2.253;QD=19.49;ReadPosRankSum=-0.234;VQSLOD=4.7385;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:20.57:0,21,133	1/1:10,1:11:17.99:242,18,0	0/0:24,0:14:1.19:0,1,99	0/0:23,0:16:11.73:0,12,63	0/0:16,0:16:27.06:0,27,357	0/0:16,0:16:27.09:0,27,378	0/0:27,0:26:57.09:0,57,705	1/1:20,10:29:30.05:483,30,0	0/0:24,0:24:46.78:0,47,581	0/0:22,0:22:42.09:0,42,502	0/0:13,0:13:24.07:0,24,320	0/0:26,0:26:39.09:0,39,279	0/0:26,0:26:57.17:0,57,764	0/0:26,0:25:60.17:0,60,789	1/1:15,15:30:36.12:719,36,0	1/1:11,18:29:33.11:655,33,0	0/0:16,0:16:29.40:0,29,456	0/0:11,0:11:20.88:0,21,293	1/1:9,5:14:15.01:239,15,0	0/1:12,6:18:29.92:149,0,30	1/1:22,38:59:18.17:1336,18,0	0/0:14,0:14:5.95:0,6,42	0/0:15,0:15:20.81:0,21,145	0/0:10,0:10:2.98:0,3,21	0/0:16,0:16:21.05:0,21,261	0/1:6,6:13:2.60:249,0,3	1/1:2,17:19:21.46:395,21,0	1/1:7,6:13:9.03:171,9,0
chr10	100964757	.	CCTCCT	C	751.63	PASS	AB=0.694;AC=7;AF=0.125;AN=56;BaseQRankSum=8.974;DP=586;FS=18.340;HRun=0;HaplotypeScore=139.2390;InbreedingCoeff=0.4268;MQ=62.95;MQ0=10;MQRankSum=-5.890;QD=8.35;ReadPosRankSum=1.605;VQSLOD=1.5953;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,8:30:99:186,0,136	0/0:8,0:8:21.07:0,21,527	0/0:33,0:15:43.74:0,44,677	0/0:26,0:16:5.73:0,6,497	0/0:13,0:13:39.13:0,39,1071	0/0:15,0:15:45.15:0,45,1199	0/0:29,0:28:84.28:0,84,2187	0/0:25,0:24:66.21:0,66,1421	0/0:22,0:22:66.09:0,66,1802	0/0:21,0:21:60.20:0,60,1707	0/0:13,0:13:36.12:0,36,968	1/1:13,11:24:13.90:351,14,0	0/0:28,0:28:79.15:0,79,2141	0/0:29,0:28:81.28:0,81,2298	0/0:23,0:23:48.16:0,48,1118	0/0:28,0:28:60.20:0,60,1283	0/0:17,0:17:48.16:0,48,1323	0/0:11,0:11:24.89:0,25,758	0/0:11,0:11:30.10:0,30,597	0/0:15,0:15:39.12:0,39,813	0/0:60,0:59:96.67:0,97,2736	1/1:6,3:9:2.77:106,3,0	0/1:6,9:15:8.66:209,0,9	0/1:6,6:12:29.35:29,0,43	0/0:22,0:22:59.85:0,60,1335	0/0:12,0:12:36.12:0,36,815	0/0:21,0:21:28.06:0,28,570	0/0:13,0:13:21.07:0,21,424
chr10	100964833	.	T	TC	1309.72	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=9.459;DP=560;FS=16.137;HRun=4;HaplotypeScore=64.4758;InbreedingCoeff=0.9236;MQ=53.25;MQ0=42;MQRankSum=2.143;QD=29.10;ReadPosRankSum=1.754;VQSLOD=2.1161;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:16:45.15:614,45,0	0/0:7,0:6:15.04:0,15,170	./.	0/0:31,0:3:2.99:0,3,24	0/0:17,0:16:48.14:0,48,544	0/0:23,0:23:63.18:0,63,714	0/0:29,0:26:66.19:0,66,746	0/0:27,0:20:54.15:0,54,604	0/0:26,0:26:75.20:0,75,843	0/0:22,0:18:48.14:0,48,544	0/0:17,0:17:48.12:0,48,533	1/1:2,7:8:18.06:246,18,0	0/0:33,0:33:96.22:0,96,1052	0/0:22,0:22:63.18:0,63,712	0/0:19,0:19:45.12:0,45,510	0/0:36,0:35:90.24:0,90,1010	0/0:29,0:29:78.22:0,78,884	0/0:14,0:14:13.44:0,13,368	0/0:10,0:6:15.04:0,15,170	0/0:20,0:19:48.14:0,48,545	0/0:48,0:43:99:0,117,1299	1/1:0,4:4:12.04:164,12,0	1/1:1,4:4:9.03:123,9,0	1/1:1,9:10:24.08:328,24,0	0/0:21,0:21:57.14:0,57,633	0/0:19,0:18:57.16:0,57,647	0/0:15,0:15:39.10:0,39,442	0/0:8,0:8:21.02:0,21,205
chr10	100964911	.	T	TC	1911.70	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=6.766;DP=563;FS=9.485;HRun=4;HaplotypeScore=62.5588;InbreedingCoeff=0.9891;MQ=53.08;MQ0=46;MQRankSum=0.758;QD=26.93;ReadPosRankSum=0.837;VQSLOD=2.2601;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,20:24:47.72:635,48,0	0/0:7,0:6:15.04:0,15,170	./.	./.	0/0:16,0:15:36.10:0,36,408	0/0:21,0:20:57.16:0,57,647	0/0:24,0:20:57.15:0,57,637	0/0:23,0:19:42.10:0,42,462	0/0:21,0:20:45.11:0,45,503	0/0:23,0:23:66.19:0,66,748	0/0:21,0:21:57.16:0,57,647	1/1:3,6:9:27.04:320,27,0	0/0:26,0:24:60.15:0,60,671	0/0:33,0:33:99:0,99,1121	0/0:18,0:17:45.13:0,45,510	0/0:33,0:33:93.25:0,93,1044	0/0:23,0:23:63.18:0,63,715	0/0:21,0:20:39.68:0,40,583	0/0:15,0:9:24.07:0,24,272	0/0:23,0:21:54.15:0,54,611	0/0:32,0:29:72.17:0,72,796	1/1:0,11:10:27.09:353,27,0	1/1:1,6:6:15.05:202,15,0	1/1:5,14:19:41.30:572,41,0	0/0:16,0:16:48.14:0,48,544	0/0:20,0:19:54.13:0,54,597	0/0:16,0:15:42.12:0,42,475	0/0:6,0:6:17.08:0,17,176
chr10	100964953	.	GCTC	G	4193.90	PASS	AB=0.933;AC=11;AF=0.196;AN=56;BaseQRankSum=13.203;DP=694;FS=43.269;HRun=0;HaplotypeScore=101.0553;InbreedingCoeff=0.8254;MQ=55.86;MQ0=16;MQRankSum=-0.796;QD=26.21;ReadPosRankSum=1.510;VQSLOD=1.7397;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,31:45:86.87:1236,87,0	0/0:11,0:11:30.10:0,30,593	0/0:40,0:9:4.96:0,5,88	0/0:34,0:9:2.82:0,3,138	0/0:26,0:26:75.26:0,75,1521	0/0:23,0:22:45.15:0,45,882	0/0:21,0:20:57.18:0,57,1092	0/0:22,0:20:39.07:0,39,679	0/0:16,0:16:39.13:0,39,805	0/0:21,0:21:45.15:0,45,903	0/0:20,0:20:48.15:0,48,940	1/1:3,20:23:54.18:790,54,0	0/0:27,0:27:69.23:0,69,1330	0/0:31,0:31:84.27:0,84,1665	0/0:20,0:20:57.20:0,57,1176	0/0:36,0:35:69.24:0,69,1409	0/0:24,0:24:72.23:0,72,1427	0/0:23,2:24:19.29:0,19,1090	0/0:20,0:18:27.02:0,27,441	0/0:26,0:26:66.19:0,66,1288	0/1:26,2:25:33.94:34,0,736	1/1:7,15:22:51.16:718,51,0	1/1:1,9:10:30.08:411,30,0	1/1:16,15:31:72.21:1005,72,0	0/0:26,0:26:72.23:0,72,1417	0/0:27,0:26:66.23:0,66,1345	0/0:26,0:26:72.24:0,72,1424	0/0:11,0:10:22.15:0,22,405
chr10	100965376	.	T	TCTCTCC	1027.33	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=4.274;DP=608;FS=0.920;HRun=0;HaplotypeScore=131.5263;InbreedingCoeff=0.7391;MQ=67.57;MQ0=10;MQRankSum=-6.181;QD=14.47;ReadPosRankSum=-3.588;VQSLOD=2.3655;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:51.24:0,51,976	0/0:14,0:14:23.82:0,24,431	0/0:27,0:22:15.02:0,15,233	0/0:39,0:25:3.18:0,3,262	0/0:25,0:25:60.17:0,60,1144	0/0:22,0:22:45.06:0,45,747	0/0:14,0:14:18.06:0,18,364	0/0:34,0:34:29.75:0,30,520	0/0:16,0:16:36.10:0,36,665	0/0:33,0:33:51.15:0,51,887	0/0:25,0:25:46.38:0,46,927	1/1:1,8:12:15.05:489,15,0	0/0:25,0:25:69.23:0,69,1387	0/0:23,0:23:57.15:0,57,1053	0/0:21,0:21:48.15:0,48,931	0/1:16,0:16:1.41:1,0,530	0/0:28,0:27:31.04:0,31,1099	0/0:11,0:11:33.06:0,33,629	0/0:10,0:8:11.87:0,12,198	0/0:20,0:20:33.04:0,33,600	0/0:10,0:9:2.94:0,3,18	1/1:7,12:22:15.05:432,15,0	1/1:6,12:20:9.92:237,10,0	./.	0/0:25,0:25:60.17:0,60,1134	0/0:21,0:20:35.08:0,35,606	0/0:29,0:29:7.88:0,8,382	0/0:14,0:14:18.01:0,18,197
chr10	100965423	.	C	CTCTCTCTTTCTG	6891.12	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=1.135;DP=628;FS=4.245;HRun=0;HaplotypeScore=222.7744;InbreedingCoeff=0.6844;MQ=74.01;MQ0=4;MQRankSum=-8.693;QD=31.90;ReadPosRankSum=-4.778;VQSLOD=3.1332;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:30.98:31,0,1529	0/0:8,0:8:5.08:0,5,562	0/0:48,0:30:64.90:0,65,918	0/0:53,0:39:24.61:0,25,732	0/0:22,0:22:63.18:0,63,2110	0/0:26,0:26:78.13:0,78,2471	0/0:18,0:18:54.15:0,54,1523	1/1:40,0:40:68.68:1479,69,0	0/0:12,0:12:36.05:0,36,1054	0/0:25,0:25:71.99:0,72,2054	0/0:24,0:24:69.14:0,69,2112	0/0:21,0:21:35.15:0,35,1133	0/0:27,0:27:81.16:0,81,2322	0/0:27,0:27:81.21:0,81,2422	0/0:18,0:18:1.22:0,1,1122	1/1:14,0:14:34.16:725,34,0	0/0:30,0:30:84.06:0,84,2428	0/0:13,0:13:39.05:0,39,978	1/1:2,7:15:38.47:958,38,0	1/1:17,0:17:37.09:715,37,0	1/1:7,0:7:5.38:39,5,0	0/1:13,0:13:16.93:17,0,366	0/1:16,0:16:14.11:14,0,782	0/0:22,0:22:51.16:0,51,1255	0/0:17,0:17:51.16:0,51,1690	1/1:4,12:23:44.52:1496,45,0	1/1:5,18:29:13.14:883,13,0	1/1:1,8:9:9.50:533,10,0
chr10	100965687	.	A	AGCTCCT	9029.40	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=6.898;DP=693;FS=0.405;HRun=0;HaplotypeScore=170.8483;InbreedingCoeff=0.9982;MQ=64.84;MQ0=0;MQRankSum=-11.746;QD=49.34;ReadPosRankSum=-0.842;VQSLOD=4.7530;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,144,3059	0/0:11,0:11:30.07:0,30,605	0/0:28,0:28:48.16:0,48,984	0/0:22,0:21:42.11:0,42,802	0/0:25,0:25:60.21:0,60,1261	0/0:26,0:26:60.21:0,60,1234	0/0:25,0:25:63.22:0,63,1362	1/1:21,3:24:30.09:788,30,0	0/0:23,0:23:66.18:0,66,1382	0/0:28,0:28:66.23:0,66,1415	0/0:15,0:15:39.13:0,39,824	0/0:29,0:29:63.19:0,63,1266	0/0:36,0:36:78.23:0,78,1588	0/0:30,0:30:75.26:0,75,1590	0/0:40,0:40:75.24:0,75,1551	1/1:9,14:22:48.15:1436,48,0	0/0:26,0:26:60.16:0,60,1193	0/0:12,0:12:30.09:0,30,609	1/1:14,4:18:21.07:692,21,0	1/1:10,11:21:39.13:1257,39,0	1/1:20,8:28:30.09:930,30,0	0/0:20,0:20:48.16:0,48,1027	0/0:17,0:17:42.13:0,42,794	0/0:23,0:23:48.16:0,48,1019	0/0:18,0:18:48.16:0,48,1007	1/1:13,10:22:39.12:1114,39,0	1/1:16,16:32:72.23:2220,72,0	1/1:9,5:14:21.07:592,21,0
chr10	100965736	.	T	TCTTA	24328.17	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-9.166;DP=701;FS=2.477;HRun=0;HaplotypeScore=118.8963;InbreedingCoeff=0.9998;MQ=76.89;MQ0=1;MQRankSum=-9.472;QD=61.13;ReadPosRankSum=0.615;VQSLOD=6.8156;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,47:52:99:3500,138,0	1/1:1,11:12:33.11:870,33,0	0/0:24,0:24:56.91:0,57,899	0/0:29,0:29:72.04:0,72,1188	0/0:18,0:18:54.17:0,54,963	0/0:31,0:31:90.29:0,90,1599	0/0:30,0:30:87.24:0,87,1527	1/1:14,27:44:96.29:2298,96,0	0/0:22,0:22:60.19:0,60,1051	0/0:23,0:23:60.21:0,60,1085	0/0:19,0:19:39.12:0,39,684	1/1:2,29:31:84.29:2205,84,0	0/0:25,0:25:54.19:0,54,993	0/0:20,0:20:60.10:0,60,999	1/1:6,30:40:90.31:2292,90,0	1/1:11,20:31:75.23:1806,75,0	0/0:28,0:28:81.23:0,81,1447	0/0:17,0:17:51.17:0,51,931	1/1:8,10:20:45.11:1018,45,0	1/1:5,15:20:54.13:1220,54,0	1/1:2,21:23:51.17:1301,51,0	1/1:5,19:24:57.08:1311,57,0	1/1:2,16:19:51.18:1330,51,0	1/1:2,25:27:60.21:1584,60,0	0/0:17,0:17:45.15:0,45,818	1/1:3,14:17:45.15:1137,45,0	1/1:3,23:27:72.19:1802,72,0	1/1:4,6:10:27.09:653,27,0
chr10	100965801	.	A	AAC	10017.69	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-13.484;DP=750;FS=0.639;HRun=0;HaplotypeScore=111.2313;InbreedingCoeff=0.9993;MQ=63.82;MQ0=2;MQRankSum=-4.115;QD=45.74;ReadPosRankSum=0.717;VQSLOD=6.0527;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,123,1686	0/0:12,0:12:36.12:0,36,504	0/0:24,0:24:60.19:0,60,824	0/0:24,0:24:70.13:0,70,923	0/0:22,0:22:63.21:0,63,882	0/0:23,0:23:66.22:0,66,924	0/0:30,0:30:87.27:0,87,1200	1/1:2,27:29:81.28:1401,81,0	0/0:19,0:19:57.19:0,57,798	0/0:38,0:38:99:0,111,1553	0/0:19,0:19:51.17:0,51,714	0/0:30,0:29:78.22:0,78,1069	0/0:25,0:25:75.25:0,75,1050	0/0:27,0:27:75.25:0,75,1050	0/0:45,0:45:99:0,117,1633	1/1:6,36:42:99:1914,108,0	0/0:31,0:31:87.24:0,87,1178	0/0:22,0:22:57.19:0,57,798	1/1:3,11:13:36.05:555,36,0	1/1:2,35:37:87.30:1563,87,0	1/1:3,34:37:96.33:1725,96,0	0/0:27,0:27:66.22:0,66,923	0/0:26,0:26:63.20:0,63,865	0/0:22,0:22:48.12:0,48,649	0/0:18,0:18:51.16:0,51,699	1/1:2,22:24:63.22:1134,63,0	1/1:2,27:28:75.26:1348,75,0	1/1:0,7:7:21.07:378,21,0
chr10	100966546	.	GGTGA	G	1036.64	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.527;DP=773;FS=2.724;HRun=0;HaplotypeScore=143.3368;InbreedingCoeff=0.9998;MQ=90.59;MQ0=0;MQRankSum=-4.468;QD=39.87;ReadPosRankSum=0.015;VQSLOD=3.8776;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:26:72.03:1132,72,0	0/0:16,0:16:36.05:0,36,951	0/0:35,0:35:99:0,99,2506	0/0:27,0:27:44.82:0,45,1115	0/0:27,0:27:81.28:0,81,2097	0/0:25,0:25:75.26:0,75,1965	0/0:27,0:27:72.23:0,72,1808	0/0:35,0:34:93.31:0,93,2227	0/0:36,0:36:99:0,105,2681	0/0:37,0:37:99:0,108,2748	0/0:20,0:20:57.20:0,57,1505	0/0:33,0:33:87.25:0,87,2142	0/0:25,0:25:69.24:0,69,1765	0/0:21,0:21:57.20:0,57,1504	0/0:27,0:27:78.27:0,78,2055	0/0:43,0:43:99:0,117,3056	0/0:29,0:29:75.26:0,75,1939	0/0:18,0:18:45.15:0,45,1169	0/0:17,0:17:42.14:0,42,1031	0/0:44,0:44:99:0,123,3221	0/0:19,0:19:51.16:0,51,1292	0/0:25,0:25:75.26:0,75,1961	0/0:29,0:29:69.24:0,69,1777	0/0:21,0:21:60.21:0,60,1527	0/0:23,0:23:63.21:0,63,1509	0/0:31,0:31:93.32:0,93,2397	0/0:38,0:38:99:0,108,2826	0/0:19,0:19:45.15:0,45,1186
chr10	100969377	.	GA	G	912.86	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.623;DP=750;FS=3.547;HRun=4;HaplotypeScore=98.7726;InbreedingCoeff=0.9835;MQ=90.27;MQ0=0;MQRankSum=-3.398;QD=29.45;ReadPosRankSum=1.557;VQSLOD=3.6096;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.28:0,96,1291	0/0:6,0:6:15.05:0,15,206	0/0:27,0:27:72.18:0,72,927	0/0:31,0:32:74.97:0,75,921	0/0:22,0:22:60.19:0,60,823	0/0:29,0:29:81.26:0,81,1116	0/0:29,0:29:75.24:0,75,1030	0/0:39,0:40:99:0,111,1450	0/0:29,0:29:84.26:0,84,1144	0/0:30,0:30:90.28:0,90,1220	0/0:22,0:22:63.21:0,63,882	0/0:26,0:26:75.24:0,75,1033	0/0:36,0:36:99:0,99,1349	0/0:28,0:28:78.26:0,78,1090	1/1:2,29:31:84.25:1008,84,0	0/0:26,0:26:78.25:0,78,1059	0/0:29,0:29:87.26:0,87,1197	0/0:9,0:9:27.08:0,27,360	0/0:18,0:18:54.16:0,54,706	0/0:35,0:35:95.32:0,95,1216	0/0:19,0:19:57.18:0,57,763	0/0:37,0:37:99:0,105,1454	0/0:25,0:25:72.24:0,72,999	0/0:23,0:23:66.22:0,66,924	0/0:29,0:29:78.26:0,78,1092	0/0:26,0:26:75.24:0,75,1016	0/0:38,0:38:99:0,114,1486	0/0:15,0:15:45.14:0,45,604
chr10	100969713	.	AC	A	1659.77	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=10.354;DP=580;FS=0.394;HRun=1;HaplotypeScore=95.0440;InbreedingCoeff=0.9229;MQ=59.44;MQ0=4;MQRankSum=-5.911;QD=8.10;ReadPosRankSum=-2.331;VQSLOD=-0.1127;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:40:5.76:6,0,501	1/1:5,0:5:10.51:82,11,0	0/0:20,1:10:14.33:0,14,162	0/0:20,0:8:17.72:0,18,191	0/0:28,0:28:81.25:0,81,1252	0/0:18,0:18:51.16:0,51,784	0/0:21,0:21:60.18:0,60,896	1/1:20,0:19:29.58:192,30,0	0/0:21,0:21:60.17:0,60,889	0/0:28,0:28:75.16:0,75,1090	0/0:21,0:21:60.20:0,60,917	0/0:11,0:11:29.77:0,30,249	0/0:14,0:14:42.11:0,42,583	0/0:18,0:18:51.14:0,51,741	1/1:16,0:16:20.53:131,21,0	1/1:21,1:22:16.96:80,17,0	0/0:24,0:24:72.14:0,72,993	0/0:19,0:19:51.13:0,51,754	1/1:18,0:18:38.44:282,38,0	1/1:31,0:32:60.15:335,60,0	1/1:7,1:7:14.97:124,15,0	0/0:28,0:28:72.56:0,73,727	0/0:21,0:21:56.83:0,57,577	0/0:33,0:33:91.80:0,92,772	0/0:25,0:25:72.14:0,72,1026	1/1:14,0:14:23.33:203,23,0	1/1:19,2:20:37.90:298,38,0	1/1:8,0:8:17.95:146,18,0
chr10	100969714	.	CG	C	2238.44	PASS	AB=0.946;AC=22;AF=0.393;AN=56;BaseQRankSum=10.214;DP=580;FS=0.000;HRun=2;HaplotypeScore=95.4100;InbreedingCoeff=0.8521;MQ=59.49;MQ0=6;MQRankSum=-5.919;QD=9.69;ReadPosRankSum=-3.107;VQSLOD=0.2475;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:39,3:42:31.74:259,0,32	1/1:5,0:5:10.51:82,11,0	0/1:22,0:10:1.38:1,0,118	0/0:23,0:8:17.49:0,17,141	0/0:28,0:28:78.24:0,78,1098	0/0:18,0:18:49.02:0,49,662	0/0:20,0:20:58.66:0,59,754	1/1:19,0:17:29.58:191,30,0	0/0:20,0:20:54.13:0,54,721	0/0:29,0:29:72.17:0,72,969	0/0:21,0:21:60.06:0,60,747	0/0:12,0:12:6.55:0,7,38	0/0:12,0:12:36.02:0,36,450	0/0:18,0:18:46.64:0,47,581	1/1:10,6:16:45.01:420,45,0	1/1:23,0:23:16.79:79,17,0	0/0:24,0:24:63.31:0,63,769	0/0:19,0:19:48.15:0,48,676	1/1:19,0:19:40.25:286,40,0	1/1:33,0:33:62.52:343,63,0	1/1:8,0:7:14.97:124,15,0	0/0:27,0:27:24.31:0,24,229	0/0:20,0:20:23.15:0,23,197	0/0:35,0:35:15.70:0,16,127	0/0:23,0:23:63.12:0,63,772	1/1:15,0:15:26.29:223,26,0	1/1:20,0:19:37.90:298,38,0	1/1:8,0:8:17.95:146,18,0
chr10	100969715	.	G	GAAAA	3124.03	PASS	AB=0.992;AC=21;AF=0.375;AN=56;BaseQRankSum=7.356;DP=589;FS=3.884;HRun=0;HaplotypeScore=131.7398;InbreedingCoeff=0.7787;MQ=60.48;MQ0=6;MQRankSum=-5.734;QD=13.18;ReadPosRankSum=-5.181;VQSLOD=1.9723;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:41:3.72:4,0,705	1/1:4,1:5:5.44:105,5,0	0/1:23,0:11:2.87:3,0,221	0/0:25,0:10:19.20:0,19,227	0/0:27,0:27:78.24:0,78,1499	0/0:19,0:19:51.16:0,51,957	0/0:20,0:20:60.17:0,60,1109	1/1:4,10:14:24.92:234,25,0	0/0:22,0:22:57.20:0,57,1142	0/0:27,0:27:72.20:0,72,1318	0/0:20,0:20:60.10:0,60,1035	0/0:13,0:13:30.10:0,30,561	0/0:14,0:14:37.36:0,37,653	0/0:20,0:20:49.82:0,50,878	0/1:16,0:16:73.80:74,0,93	1/1:3,14:26:17.38:315,17,0	0/0:23,0:23:67.05:0,67,1211	0/0:18,0:18:48.16:0,48,943	1/1:7,8:21:38.55:566,39,0	1/1:4,22:37:69.93:943,70,0	1/1:8,0:7:11.73:97,12,0	0/0:26,0:26:69.17:0,69,1076	0/0:21,0:21:48.09:0,48,808	0/0:35,0:35:93.09:0,93,1713	0/0:22,0:22:63.17:0,63,1109	1/1:3,9:14:35.53:381,36,0	1/1:17,4:21:35.60:499,36,0	1/1:8,0:8:7.26:108,7,0
chr10	100969716	.	GA	G	1222.48	PASS	AB=0.832;AC=11;AF=0.204;AN=54;BaseQRankSum=1.056;DP=617;FS=5.828;HRun=11;HaplotypeScore=125.4037;InbreedingCoeff=0.7080;MQ=58.14;MQ0=6;MQRankSum=1.868;QD=7.74;ReadPosRankSum=3.481;VQSLOD=2.0399;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:37.61:0,38,766	0/0:9,0:9:10.83:0,11,87	0/1:21,3:11:9.13:9,0,65	0/1:25,1:10:5.63:6,0,26	0/0:26,0:27:71.97:0,72,731	0/0:17,1:19:23.30:0,23,431	0/0:18,0:19:53.96:0,54,550	0/0:21,0:19:24.70:0,25,160	0/0:22,1:23:29.46:0,29,497	0/0:24,0:25:59.15:0,59,648	0/0:20,0:20:42.08:0,42,428	1/1:1,12:13:26.97:222,27,0	0/0:14,0:14:8.32:0,8,260	0/0:20,0:20:36.01:0,36,360	1/1:15,0:15:14.19:45,14,0	0/0:23,0:23:27.16:0,27,137	0/0:19,1:22:19.43:0,19,416	0/0:16,0:19:50.78:0,51,489	0/0:26,0:26:17.75:0,18,178	0/0:35,0:35:53.58:0,54,281	./.	1/1:8,17:25:38.92:320,39,0	0/1:9,11:20:2.04:192,0,2	1/1:5,29:35:53.32:595,53,0	0/0:21,0:22:44.94:0,45,457	0/0:19,0:19:18.05:0,18,176	0/0:33,0:32:19.22:0,19,206	0/0:14,0:14:20.16:0,20,109
chr10	100969725	.	AAAG	A	271.55	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=5.675;DP=628;FS=0.000;HRun=0;HaplotypeScore=124.5175;InbreedingCoeff=0.2910;MQ=65.16;MQ0=8;MQRankSum=-1.272;QD=2.40;ReadPosRankSum=-4.217;VQSLOD=0.4235;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:98.32:0,98,1531	0/1:8,0:8:1.10:1,0,260	0/1:32,0:18:12.22:12,0,215	0/1:37,0:15:3.80:4,0,92	0/0:32,0:32:87.09:0,87,1394	0/0:19,0:19:57.09:0,57,993	0/0:22,0:22:60.13:0,60,1066	0/0:25,0:23:34.17:0,34,480	0/0:22,0:22:63.15:0,63,1113	0/0:32,0:32:89.95:0,90,1469	0/0:18,0:18:54.10:0,54,853	0/0:18,0:18:44.94:0,45,402	0/0:17,0:17:48.04:0,48,690	0/0:16,0:16:42.11:0,42,753	1/1:7,6:13:22.89:355,23,0	0/0:22,0:22:30.04:0,30,535	0/0:20,0:20:56.26:0,56,903	0/0:19,0:19:51.15:0,51,965	0/0:23,0:23:24.99:0,25,647	0/0:33,0:33:38.16:0,38,806	0/0:5,0:4:3.01:0,3,33	0/0:24,0:24:38.28:0,38,410	0/0:13,0:13:29.91:0,30,276	0/0:32,0:32:82.35:0,82,641	0/0:21,0:21:60.15:0,60,1025	0/1:23,0:23:13.67:14,0,519	0/0:33,0:32:20.19:0,20,725	0/0:12,0:12:29.13:0,29,453
chr10	100969733	.	GA	G	753.26	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.877;DP=644;FS=11.708;HRun=8;HaplotypeScore=98.8718;InbreedingCoeff=0.8347;MQ=66.54;MQ0=8;MQRankSum=0.221;QD=20.92;ReadPosRankSum=3.697;VQSLOD=3.0433;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,32:36:70.95:848,71,0	0/0:8,0:8:21.06:0,21,253	0/0:37,0:21:44.98:0,45,424	0/0:35,0:14:16.86:0,17,171	0/0:28,0:28:72.22:0,72,866	0/0:24,0:24:72.21:0,72,859	0/0:23,0:23:63.19:0,63,761	0/0:28,0:27:66.17:0,66,765	0/0:24,0:24:69.21:0,69,829	0/0:36,0:36:96.29:0,96,1155	0/0:17,0:17:45.14:0,45,543	0/0:19,0:19:45.14:0,45,544	0/0:19,0:19:48.13:0,48,568	0/0:16,0:16:42.10:0,42,493	0/0:11,0:11:29.16:0,29,318	0/0:22,0:22:40.01:0,40,473	0/0:21,0:21:57.13:0,57,672	0/0:20,0:20:54.12:0,54,633	0/0:26,0:26:62.72:0,63,724	0/0:33,0:33:66.65:0,67,769	0/0:3,0:3:3.01:0,3,36	0/0:18,1:19:19.17:0,19,513	0/0:16,0:16:30.09:0,30,362	0/0:32,0:32:81.23:0,81,961	0/0:23,0:23:63.19:0,63,758	0/0:23,0:23:54:0,54,630	0/0:33,0:32:68.18:0,68,767	0/0:12,0:12:33.10:0,33,395
chr10	100970237	.	A	AT	6301.55	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-5.014;DP=582;FS=7.164;HRun=6;HaplotypeScore=59.7359;InbreedingCoeff=0.9960;MQ=75.37;MQ0=0;MQRankSum=0.580;QD=33.70;ReadPosRankSum=1.173;VQSLOD=4.8189;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:30.07:0,30,306	1/1:1,5:6:15.05:189,15,0	0/0:13,0:15:31.55:0,32,258	0/0:14,0:14:37.17:0,37,328	0/0:37,0:37:99:0,108,1095	0/0:38,0:38:99:0,111,1121	0/0:13,0:13:33.06:0,33,330	1/1:3,22:25:66.18:803,66,0	0/0:19,0:19:57.13:0,57,581	0/0:26,0:26:72.15:0,72,730	0/0:14,0:14:42.10:0,42,428	0/0:29,0:29:81.18:0,81,826	0/0:24,0:24:66.13:0,66,666	0/0:14,0:14:42.10:0,42,428	0/0:19,0:19:57.12:0,57,575	1/1:0,23:23:63.20:793,63,0	0/0:19,0:19:51.11:0,51,520	0/0:13,0:13:33.07:0,33,337	1/1:4,18:23:57.18:713,57,0	1/1:1,27:28:78.22:965,78,0	1/1:3,15:18:45.14:566,45,0	0/0:23,0:23:60.13:0,60,612	0/0:22,0:22:57.11:0,57,575	0/0:17,0:17:45.10:0,45,459	0/0:28,0:28:72.16:0,72,735	1/1:0,22:22:66.17:801,66,0	1/1:1,35:34:99:1245,99,0	1/1:0,6:6:18.06:226,18,0
chr10	100970761	.	CAAATATATCAGCCTATAA	C	3406.49	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.922;DP=660;FS=1.776;HRun=0;HaplotypeScore=316.5658;InbreedingCoeff=0.9994;MQ=65.75;MQ0=0;MQRankSum=-7.896;QD=117.47;ReadPosRankSum=2.205;VQSLOD=2.6161;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.22:0,69,5100	0/0:10,0:10:30.10:0,30,2373	0/0:29,0:27:81.27:0,81,5193	0/0:21,0:20:54.10:0,54,2878	0/0:25,0:25:75.26:0,75,6045	0/0:18,0:18:54.19:0,54,4172	0/0:22,0:22:66.20:0,66,4497	0/0:38,0:38:99:0,111,8328	0/0:25,0:25:75.26:0,75,5550	0/0:26,0:26:75.24:0,75,5736	0/0:24,0:24:72.25:0,72,5901	0/0:31,0:31:84.29:0,84,6919	0/0:26,0:26:78.27:0,78,6670	0/0:27,0:27:78.25:0,78,6011	1/1:5,24:29:66.23:3406,66,0	0/0:26,0:26:69.24:0,69,5591	0/0:17,0:17:51.13:0,51,3900	0/0:19,0:19:54.19:0,54,4429	0/0:15,0:15:45.15:0,45,3351	0/0:22,0:22:60.21:0,60,4414	0/0:24,0:24:69.24:0,69,5531	0/0:18,0:18:51.18:0,51,4231	0/0:19,0:19:51.18:0,51,4144	0/0:31,0:31:93.32:0,93,7183	0/0:15,0:15:45.15:0,45,3312	0/0:14,0:14:42.14:0,42,3080	0/0:44,0:44:99:0,132,10853	0/0:19,0:19:57.19:0,57,3753
chr10	100971103	.	TA	T	685.26	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.123;DP=642;FS=0.000;HRun=3;HaplotypeScore=60.6654;InbreedingCoeff=0.9999;MQ=87.08;MQ0=0;MQRankSum=-4.896;QD=31.15;ReadPosRankSum=-0.572;VQSLOD=3.1368;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.21:0,72,1013	0/0:14,0:14:42.14:0,42,605	0/0:25,0:25:69.22:0,69,954	0/0:20,0:20:57.12:0,57,757	0/0:20,0:20:57.19:0,57,821	0/0:40,0:40:99:0,117,1668	0/0:23,0:22:69.22:0,69,977	0/0:39,0:39:99:0,114,1639	0/0:24,0:24:72.23:0,72,1020	0/0:27,0:27:81.27:0,81,1166	0/0:25,0:25:72.23:0,72,1017	0/0:22,0:22:66.22:0,66,945	0/0:25,0:25:72.23:0,72,1015	0/0:24,0:24:69.23:0,69,989	1/1:1,21:22:63.20:780,63,0	0/0:22,0:22:57.18:0,57,805	0/0:24,0:24:69.19:0,69,955	0/0:15,0:15:45.15:0,45,648	0/0:26,0:26:75.25:0,75,1080	0/0:25,0:25:75.25:0,75,1080	0/0:25,0:25:69.23:0,69,988	0/0:18,0:18:54.18:0,54,774	0/0:15,0:15:42.14:0,42,601	0/0:14,0:14:42.14:0,42,605	0/0:17,0:17:51.17:0,51,735	0/0:28,0:28:84.28:0,84,1210	0/0:17,0:17:51.17:0,51,733	0/0:22,0:22:63.21:0,63,897
chr10	100971132	.	A	AT	955.67	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.493;DP=624;FS=0.695;HRun=7;HaplotypeScore=61.8029;InbreedingCoeff=0.9977;MQ=80.39;MQ0=0;MQRankSum=-4.106;QD=31.86;ReadPosRankSum=0.047;VQSLOD=3.4652;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.11:0,69,665	0/0:11,0:11:27.04:0,27,260	0/0:16,0:16:36.05:0,36,347	0/0:19,0:19:29.86:0,30,289	0/0:21,0:21:57.09:0,57,550	0/0:35,0:35:93.14:0,93,898	0/0:28,0:27:75.11:0,75,724	0/0:37,0:37:84.13:0,84,810	0/0:20,0:20:51.08:0,51,493	0/0:25,0:25:72.10:0,72,689	0/0:28,0:28:81.13:0,81,781	0/0:22,0:22:57.09:0,57,550	0/0:16,0:16:36.06:0,36,347	0/0:21,0:21:60.10:0,60,579	1/1:1,29:30:87.27:1051,87,0	0/0:16,0:16:45.06:0,45,429	0/0:21,0:21:51.07:0,51,492	0/0:12,0:12:33.05:0,33,319	0/0:29,0:29:75.10:0,75,714	0/0:30,0:30:87.13:0,87,834	0/0:18,0:18:42.04:0,42,394	0/0:18,0:18:51.08:0,51,492	0/0:20,0:20:54.07:0,54,516	0/0:13,0:13:36.05:0,36,342	0/0:16,0:16:45.07:0,45,435	0/0:29,0:29:78.12:0,78,753	0/0:23,0:23:66.07:0,66,629	0/0:23,0:23:60.05:0,60,566
chr10	100971729	.	C	CAT	568.45	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.740;DP=601;FS=2.383;HRun=0;HaplotypeScore=86.5922;InbreedingCoeff=0.8887;MQ=65.70;MQ0=0;MQRankSum=0.542;QD=33.44;ReadPosRankSum=0.660;VQSLOD=5.7218;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:42.14:0,42,545	0/0:7,0:7:21.07:0,21,273	0/0:4,0:4:5.85:0,6,53	0/0:16,0:16:18.02:0,18,190	0/0:28,0:28:66.18:0,66,819	0/0:24,0:24:63.20:0,63,818	0/0:12,0:12:33.11:0,33,429	0/0:41,0:41:99:0,102,1303	0/0:17,0:17:48.14:0,48,610	0/0:32,0:32:84.24:0,84,1055	0/0:23,0:23:66.18:0,66,817	0/0:23,0:23:63.20:0,63,817	0/0:28,0:28:72.19:0,72,916	0/0:20,0:20:57.17:0,57,727	1/1:2,15:17:39.13:663,39,0	0/0:13,0:13:39.11:0,39,493	0/0:21,0:21:54.13:0,54,666	0/0:14,0:14:35.84:0,36,468	0/0:14,0:14:24.07:0,24,299	0/0:54,0:54:99:0,144,1871	0/0:8,0:8:24.06:0,24,297	0/0:12,0:12:33.09:0,33,414	0/0:26,0:26:69.21:0,69,881	0/0:19,0:19:54.18:0,54,700	0/0:21,0:21:60.17:0,60,753	0/0:31,0:31:90.29:0,90,1170	0/0:42,0:42:99:0,105,1337	0/0:17,0:17:51.17:0,51,663
chr10	100972416	.	A	AG	4290.48	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=18.500;DP=576;FS=5.182;HRun=0;HaplotypeScore=196.1760;InbreedingCoeff=0.9864;MQ=78.35;MQ0=0;MQRankSum=-18.249;QD=25.24;ReadPosRankSum=2.540;VQSLOD=4.5817;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:47.86:496,48,0	1/1:0,11:12:36.03:333,36,0	0/0:15,0:15:44.94:0,45,591	0/0:17,0:17:47.56:0,48,574	0/0:20,0:20:60.20:0,60,839	0/0:25,0:25:67.26:0,67,983	0/0:27,0:27:78.24:0,78,1072	1/1:2,12:14:35.83:360,36,0	0/0:22,0:22:66.20:0,66,905	0/0:31,0:31:93.31:0,93,1301	0/0:33,0:33:96.30:0,96,1310	0/0:26,0:26:78.26:0,78,1091	0/0:17,0:17:51.17:0,51,713	0/0:20,0:20:60.20:0,60,839	1/1:0,20:20:60.06:560,60,0	1/1:1,16:17:9.10:407,9,0	0/0:16,0:16:45.15:0,45,629	0/0:25,0:25:66.69:0,67,924	1/1:1,11:12:33.07:332,33,0	1/1:0,20:20:40.36:419,40,0	1/1:0,6:6:12.12:74,12,0	0/0:32,0:32:96.32:0,96,1342	0/0:29,0:29:87.29:0,87,1216	0/0:28,0:28:84.28:0,84,1174	0/0:23,0:22:69.23:0,69,965	1/1:0,17:17:51.09:501,51,0	1/1:0,22:22:65.88:611,66,0	1/1:1,7:8:18.98:198,19,0
chr10	100972417	.	T	TCCCCA	14429.15	PASS	AB=0.556;AC=21;AF=0.375;AN=56;BaseQRankSum=17.902;DP=625;FS=1.010;HRun=0;HaplotypeScore=229.3777;InbreedingCoeff=0.9156;MQ=75.00;MQ0=0;MQRankSum=-19.351;QD=65.59;ReadPosRankSum=-0.372;VQSLOD=4.9052;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,20:27:60.14:1421,60,0	1/1:4,11:15:36.12:964,36,0	0/0:15,0:15:45.15:0,45,1010	0/0:16,0:16:45.15:0,45,946	0/0:20,0:20:60.21:0,60,1392	0/0:25,0:25:67.43:0,67,1621	0/0:26,0:26:75.24:0,75,1678	1/1:13,12:25:69.22:1683,69,0	0/0:21,0:21:63.22:0,63,1465	0/0:32,0:32:93.32:0,93,2168	0/0:32,0:32:96.32:0,96,2168	0/0:26,0:26:78.27:0,78,1795	0/0:17,0:17:51.18:0,51,1189	0/0:20,0:20:60.21:0,60,1398	1/1:3,20:23:69.19:1777,69,0	0/1:4,16:20:9.72:1439,0,10	0/0:17,0:17:48.14:0,48,1068	0/0:26,0:26:49.84:0,50,1518	1/1:5,11:16:42.14:1103,42,0	1/1:6,20:26:68.98:1403,69,0	1/1:1,6:7:6.02:160,6,0	0/0:32,0:32:96.33:0,96,2237	0/0:29,0:29:87.30:0,87,1996	0/0:28,0:28:84.29:0,84,1885	0/0:23,0:22:69.24:0,69,1599	1/1:5,17:22:57.20:1538,57,0	1/1:7,21:29:87.30:2278,87,0	1/1:3,7:10:27.09:663,27,0
chr10	100972660	.	TA	T	8397.05	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=9.813;DP=753;FS=1.230;HRun=7;HaplotypeScore=96.0360;InbreedingCoeff=0.9978;MQ=68.99;MQ0=0;MQRankSum=2.080;QD=26.32;ReadPosRankSum=1.727;VQSLOD=5.1467;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,147,1836	1/1:0,12:12:36.08:367,36,0	0/0:26,0:25:66.19:0,66,800	0/0:18,0:17:45.07:0,45,501	0/0:18,0:18:51.15:0,51,629	0/0:24,0:24:63.20:0,63,793	0/0:34,0:34:93.29:0,93,1157	1/1:6,29:35:84.18:857,84,0	0/0:25,0:25:63.20:0,63,793	0/0:27,0:27:72.21:0,72,872	0/0:19,0:19:54.16:0,54,668	1/1:1,21:22:63.14:643,63,0	0/0:27,0:27:78.22:0,78,951	0/0:23,0:23:66.20:0,66,810	0/0:47,0:47:99:0,135,1698	1/1:0,30:30:87.20:888,87,0	0/0:39,0:39:99:0,111,1383	0/0:24,0:24:60.19:0,60,755	1/1:0,11:11:33.04:328,33,0	1/1:3,20:23:42.08:428,42,0	1/1:2,16:18:48.11:490,48,0	1/1:1,25:26:66.15:673,66,0	1/1:5,22:27:62.76:642,63,0	1/1:1,42:43:99:1132,111,0	0/0:30,0:30:84.27:0,84,1053	1/1:4,26:30:43.44:757,43,0	1/1:1,36:37:99:1040,102,0	1/1:0,5:5:15.03:153,15,0
chr10	100973149	.	C	CAG	14677.70	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=2.124;DP=549;FS=33.992;HRun=0;HaplotypeScore=98.2675;InbreedingCoeff=0.9988;MQ=77.27;MQ0=3;MQRankSum=-7.385;QD=51.32;ReadPosRankSum=2.145;VQSLOD=3.1727;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,39:38:99:2068,102,0	1/1:0,8:8:24.08:485,24,0	0/0:17,0:17:48.12:0,48,710	0/0:23,0:23:60.09:0,60,867	0/0:14,0:14:39.13:0,39,630	0/0:24,0:24:66.23:0,66,1076	0/0:31,0:31:90.25:0,90,1365	1/1:2,18:21:54.14:1016,54,0	0/0:19,0:19:54.16:0,54,832	0/0:10,0:10:27.09:0,27,440	0/0:9,0:9:27.09:0,27,440	1/1:0,22:22:57.20:1157,57,0	0/0:25,0:25:71.95:0,72,1149	0/0:23,0:23:69.19:0,69,1074	1/1:0,21:21:60.21:1218,60,0	1/1:0,19:19:54.19:1093,54,0	0/0:34,0:34:99:0,102,1639	0/0:21,0:21:60.13:0,60,921	1/1:4,14:20:48.06:843,48,0	1/1:0,15:16:39.13:789,39,0	1/1:1,29:31:60.21:1215,60,0	1/1:0,9:8:24.08:487,24,0	1/1:1,12:13:33.11:659,33,0	1/1:2,25:27:72.17:1460,72,0	0/0:13,0:13:36.11:0,36,563	1/1:0,10:10:27.09:547,27,0	1/1:0,18:19:54.19:1092,54,0	1/1:0,10:10:27.09:548,27,0
chr10	100973298	.	AC	A	2580.47	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=10.805;DP=312;FS=10.416;HRun=7;HaplotypeScore=39.7236;InbreedingCoeff=0.9576;MQ=69.08;MQ0=3;MQRankSum=-4.356;QD=23.89;ReadPosRankSum=1.254;VQSLOD=3.1003;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:22:57.13:581,57,0	1/1:0,3:3:9.02:92,9,0	0/0:14,0:8:19.61:0,20,224	0/0:15,1:9:16.33:0,16,132	0/0:11,0:11:33.11:0,33,415	0/0:9,0:8:27.09:0,27,340	0/0:25,0:25:63.17:0,63,762	1/1:3,9:10:21.05:214,21,0	0/0:12,0:12:33.10:0,33,402	0/0:8,0:8:24.07:0,24,293	0/0:3,0:3:9.03:0,9,113	0/0:12,0:12:30.08:0,30,364	0/0:11,0:12:36.10:0,36,439	0/0:21,0:21:60.19:0,60,751	1/1:0,6:6:18.04:184,18,0	1/1:1,7:8:21.05:214,21,0	0/0:17,0:17:51.16:0,51,640	0/0:6,0:7:14.88:0,15,165	1/1:0,6:6:18.04:184,18,0	1/1:0,9:9:27.06:275,27,0	1/1:0,20:20:51.12:521,51,0	0/0:7,0:7:21.06:0,21,252	0/0:10,0:10:30.10:0,30,376	0/0:9,0:9:27.09:0,27,339	0/0:10,0:10:30.08:0,30,353	1/1:1,8:9:24.05:245,24,0	1/1:1,8:9:24.05:245,24,0	1/1:4,0:4:5.98:48,6,0
chr10	100973455	.	TA	T	1311.64	PASS	AB=0.917;AC=22;AF=0.407;AN=54;BaseQRankSum=6.038;DP=297;FS=27.176;HRun=11;HaplotypeScore=43.7430;InbreedingCoeff=0.7708;MQ=65.75;MQ0=11;MQRankSum=-5.360;QD=10.17;ReadPosRankSum=-0.217;VQSLOD=0.4738;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:12:20.37:59,20,0	./.	0/0:10,0:6:6.75:0,7,57	0/1:17,0:6:14.18:14,0,48	0/0:9,0:9:27.06:0,27,281	0/0:10,0:10:24.06:0,24,256	0/1:4,1:5:12.61:13,0,84	1/1:4,18:16:41.86:333,42,0	0/0:7,0:7:15.02:0,15,152	0/0:15,0:14:33.04:0,33,335	0/0:13,0:13:8.47:0,8,278	0/0:10,0:10:21.05:0,21,224	0/0:7,0:7:14.47:0,14,124	0/0:16,0:16:30.06:0,30,311	1/1:1,0:8:14.04:41,14,0	1/1:3,3:6:14.02:104,14,0	0/0:16,1:17:14.42:0,14,336	0/0:7,0:6:17.99:0,18,166	1/1:3,4:6:14.97:120,15,0	1/1:1,9:10:26.96:222,27,0	1/1:2,1:1:3:25,3,0	0/0:8,0:7:18.05:0,18,192	0/0:16,0:15:37.64:0,38,384	0/0:5,0:6:8.18:0,8,119	0/0:15,0:15:29.81:0,30,299	1/1:5,7:11:17.96:148,18,0	1/1:2,12:14:38.94:317,39,0	1/1:5,5:6:14.98:123,15,0
chr10	100973477	.	GTTT	G	2605.79	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=4.228;DP=341;FS=6.956;HRun=14;HaplotypeScore=62.5425;InbreedingCoeff=0.8989;MQ=77.98;MQ0=4;MQRankSum=-6.440;QD=19.89;ReadPosRankSum=2.747;VQSLOD=2.4134;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.14:0,42,774	0/0:0,1:2:1.25:0,1,3	0/0:22,0:13:11.65:0,12,129	0/0:24,0:11:12.48:0,12,156	0/0:13,0:13:39.13:0,39,682	0/0:10,0:12:30.08:0,30,487	0/0:5,0:5:3.01:0,3,57	1/1:10,15:24:43.58:522,44,0	0/0:9,0:9:21.07:0,21,375	0/0:15,0:17:42.13:0,42,702	0/0:11,0:13:39.12:0,39,633	1/1:4,10:14:24:280,24,0	0/0:11,0:12:33.11:0,33,586	0/0:9,0:12:33.11:0,33,538	0/0:4,0:11:26.96:0,27,261	1/1:1,5:6:18.04:200,18,0	0/0:15,0:16:42.14:0,42,749	0/0:8,0:10:27.07:0,27,423	1/1:3,3:7:11.87:123,12,0	1/1:3,11:15:25.52:313,26,0	1/1:1,2:3:2.98:35,3,0	1/1:3,5:8:8.99:105,9,0	1/1:4,8:12:20.99:245,21,0	1/1:2,7:9:15:175,15,0	0/0:11,0:14:33.11:0,33,572	1/1:3,8:11:27.07:307,27,0	1/1:6,8:14:31.27:353,31,0	1/1:1,4:6:15:164,15,0
chr10	100975205	.	TAC	T	2369.31	PASS	AB=0.965;AC=28;AF=0.500;AN=56;BaseQRankSum=13.111;DP=675;FS=1.815;HRun=0;HaplotypeScore=152.6293;InbreedingCoeff=0.6216;MQ=67.18;MQ0=5;MQRankSum=-7.932;QD=6.11;ReadPosRankSum=1.880;VQSLOD=3.3769;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,1:22:6.09:103,0,6	1/1:6,0:6:7.24:31,7,0	0/0:21,0:15:3.01:0,3,45	0/0:25,0:21:1.84:0,2,20	0/0:28,0:28:36.06:0,36,455	0/0:27,0:27:41.54:0,42,902	0/0:23,0:23:42.13:0,42,628	0/1:43,0:42:84.59:85,0,89	0/1:25,3:28:14.40:14,0,599	0/0:25,1:26:15.94:0,16,602	0/0:14,0:14:27.05:0,27,367	1/1:6,16:22:27.08:310,27,0	0/0:26,0:26:42.12:0,42,627	0/0:24,0:24:60.19:0,60,899	0/1:27,0:27:16.22:21,0,16	1/1:24,0:24:37.01:185,37,0	0/0:21,0:20:54.13:0,54,776	0/0:28,0:28:56.82:0,57,827	1/1:27,0:27:3.94:95,4,0	1/1:30,0:30:10.47:168,10,0	1/1:23,0:23:8.03:49,8,0	1/1:13,14:27:16.50:342,17,0	1/1:7,19:26:32.98:379,33,0	1/1:5,16:21:30.08:345,30,0	0/0:23,0:24:54.16:0,54,770	1/1:26,0:26:48.07:236,48,0	1/1:25,0:25:28.69:151,29,0	1/1:9,0:8:8.83:62,9,0
chr10	100975221	.	C	CAA	2882.51	PASS	AB=0.927;AC=11;AF=0.196;AN=56;BaseQRankSum=12.773;DP=690;FS=0.000;HRun=1;HaplotypeScore=163.5267;InbreedingCoeff=0.0002;MQ=56.11;MQ0=7;MQRankSum=-8.467;QD=12.27;ReadPosRankSum=0.829;VQSLOD=0.2482;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:13.42:0,13,127	0/1:6,0:6:8.53:136,0,9	0/0:21,0:11:26.97:0,27,265	0/0:25,0:17:36.07:0,36,361	0/0:26,0:26:62.99:0,63,681	0/0:26,0:26:78.17:0,78,1041	0/0:25,0:25:75.07:0,75,888	0/1:44,2:45:99:819,0,268	0/0:27,0:27:75.06:0,75,902	0/0:26,0:26:48.42:0,48,796	0/0:13,0:13:39.02:0,39,459	0/0:22,0:22:41.81:0,42,320	0/0:22,0:22:63.08:0,63,786	0/0:28,0:28:84.12:0,84,1075	0/1:26,0:26:19.77:20,0,53	0/1:22,1:23:77.70:175,0,78	0/0:25,0:24:65.79:0,66,853	0/0:33,0:33:92.23:0,92,1095	0/1:17,3:20:10.09:331,0,10	0/1:27,0:27:49.72:583,0,50	0/1:22,5:27:13.61:368,0,14	0/0:24,0:23:50.70:0,51,383	0/0:33,0:33:65.86:0,66,506	0/0:23,0:22:11.79:0,12,266	0/0:27,0:27:54.89:0,55,909	0/1:26,0:26:57.74:318,0,58	0/1:15,10:25:99:208,0,103	1/1:9,0:8:8.31:76,8,0
chr10	100975222	.	AC	A	564.59	PASS	AB=0.716;AC=9;AF=0.161;AN=56;BaseQRankSum=13.360;DP=691;FS=3.150;HRun=1;HaplotypeScore=159.4044;InbreedingCoeff=-0.1336;MQ=56.18;MQ0=7;MQRankSum=-10.517;QD=2.75;ReadPosRankSum=4.579;VQSLOD=0.1029;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:32.08:0,32,311	0/1:3,3:6:15.37:15,0,48	0/0:22,0:11:29.45:0,29,346	0/0:25,0:17:27.79:0,28,554	0/0:25,0:25:66.22:0,66,965	0/0:27,0:27:81.09:0,81,1197	0/0:25,0:25:75.25:0,75,1087	0/1:37,10:46:50.50:50,0,679	0/0:27,0:27:73.46:0,73,1039	0/0:26,0:26:76.35:0,76,1062	0/0:15,0:15:45.12:0,45,632	0/0:23,0:23:36.10:0,36,292	0/0:23,0:23:66.16:0,66,930	0/0:29,0:29:87.27:0,87,1287	0/0:27,0:27:44.15:0,44,509	0/1:9,13:22:99:121,0,142	0/0:25,0:24:66.19:0,66,1025	0/0:33,0:33:93.28:0,93,1359	0/1:18,4:22:92.72:93,0,174	0/1:9,17:26:99:155,0,120	0/1:23,3:26:11.32:11,0,162	0/0:23,0:22:33.87:0,34,259	0/0:33,0:33:50.17:0,50,467	0/0:23,0:22:27.79:0,28,179	0/0:27,0:27:75.24:0,75,1109	0/1:8,15:23:81.09:132,0,81	0/1:15,9:24:74.52:75,0,133	0/1:4,5:8:5.11:52,0,5
chr10	100975224	.	ACACAC	A	3560.41	PASS	AB=0.742;AC=12;AF=0.214;AN=56;BaseQRankSum=14.110;DP=679;FS=3.243;HRun=0;HaplotypeScore=192.7221;InbreedingCoeff=0.2451;MQ=55.97;MQ0=7;MQRankSum=-10.240;QD=18.07;ReadPosRankSum=2.584;VQSLOD=3.4192;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:0.82:0,1,435	0/1:3,3:6:10.72:109,0,11	0/0:20,0:10:27.06:0,27,374	0/0:25,0:16:41.38:0,41,637	0/0:24,0:24:63.21:0,63,1601	0/0:26,0:26:78.26:0,78,2251	0/0:26,0:26:78.25:0,78,1821	0/1:33,10:42:99:481,0,145	0/0:27,0:27:75.25:0,75,1932	0/0:26,0:26:62.10:0,62,1869	0/0:15,0:15:42.14:0,42,1045	0/0:23,0:23:48.16:0,48,630	0/0:22,0:22:63.21:0,63,1607	0/0:29,0:29:87.29:0,87,2399	0/0:27,0:27:42.14:0,42,825	0/1:10,13:23:24.04:511,0,24	0/0:25,0:24:66.27:0,66,1976	0/0:33,0:33:95.10:0,95,2377	0/1:15,4:19:99:248,0,110	1/1:7,17:24:30.54:659,31,0	0/1:23,3:26:12.40:257,0,12	0/0:23,0:22:47.46:0,47,692	0/0:34,0:34:68.15:0,68,964	0/0:23,0:22:41.97:0,42,555	0/0:27,0:27:75.25:0,75,1993	0/1:9,15:24:45.97:636,0,46	1/1:14,9:23:1.23:455,1,0	1/1:4,5:8:3.56:204,4,0
chr10	100975460	.	GCGCACACACACACACACACACACA	G	2711.95	PASS	AB=0.977;AC=6;AF=0.107;AN=56;BaseQRankSum=5.274;DP=567;FS=2.976;HRun=0;HaplotypeScore=349.1604;InbreedingCoeff=0.6258;MQ=54.58;MQ0=10;MQRankSum=-3.456;QD=33.48;ReadPosRankSum=-0.826;VQSLOD=1.3170;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:18.06:1035,18,0	0/0:12,0:12:24.08:0,24,2091	0/0:11,0:2:3.01:0,3,119	0/0:14,0:5:12.01:0,12,374	0/0:24,0:23:57.15:0,57,5447	0/0:28,0:28:81.28:0,81,8069	0/0:25,0:25:69.20:0,69,6332	0/1:20,0:21:2.22:2,0,3527	0/0:21,0:21:63.22:0,63,5864	0/0:19,0:18:48.16:0,48,4375	0/0:17,0:17:39.12:0,39,3965	0/0:16,0:16:20.33:0,20,3897	0/0:20,0:20:57.67:0,58,5755	0/0:22,0:22:57.20:0,57,5460	1/1:0,19:19:27.09:1790,27,0	0/0:18,0:18:21.29:0,21,3718	0/0:26,0:26:78.22:0,78,6983	0/0:19,0:19:51.11:0,51,4675	0/1:14,0:14:11.65:12,0,2619	0/0:22,0:22:66.01:0,66,5445	0/0:18,0:17:43.39:0,43,3961	0/0:23,0:23:45.15:0,45,4313	0/0:25,0:25:62.02:0,62,5935	0/0:24,0:28:66.06:0,66,5832	0/0:19,0:18:42.10:0,42,3860	0/0:30,0:29:81.27:0,81,7512	0/0:14,0:14:36.12:0,36,3389	0/0:14,0:13:39.05:0,39,3321
chr10	100975462	.	GCA	G	109.21	PASS	AB=0.929;AC=8;AF=0.143;AN=56;BaseQRankSum=6.571;DP=569;FS=3.623;HRun=0;HaplotypeScore=132.8155;InbreedingCoeff=0.1987;MQ=54.31;MQ0=11;MQRankSum=-0.836;QD=0.83;ReadPosRankSum=0.933;VQSLOD=2.5200;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:12.57:58,13,0	0/0:11,0:11:0.67:0,1,211	0/0:14,0:2:2.74:0,3,12	0/0:16,0:7:3.14:0,3,20	0/0:23,2:24:16.25:0,16,653	0/0:25,0:27:39.51:0,40,883	0/1:22,3:25:18.45:18,0,579	0/0:23,0:23:19.22:0,19,338	0/0:21,0:21:45.07:0,45,586	0/0:18,0:17:30.02:0,30,396	0/0:14,3:17:1.26:0,1,433	0/0:14,1:15:1.45:0,1,381	0/0:21,0:21:42.13:0,42,618	0/0:20,0:20:28.29:0,28,660	1/1:19,0:19:25.57:126,26,0	0/0:17,0:17:4.87:0,5,365	0/1:24,2:26:18.45:18,0,605	0/1:15,2:17:18.01:18,0,410	0/0:15,0:15:3.79:0,4,222	0/0:22,0:22:18.97:0,19,485	0/1:19,0:18:5.64:6,0,374	0/0:23,0:23:3.10:0,3,464	0/0:26,0:26:3.04:0,3,677	0/0:28,0:28:41.87:0,42,668	0/0:19,0:18:33.03:0,33,475	0/0:30,0:29:21.57:0,22,834	0/0:15,0:15:8.54:0,9,415	0/0:14,0:13:29.99:0,30,345
chr10	100975692	.	T	TC	137.05	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=-3.815;DP=336;FS=8.007;HRun=2;HaplotypeScore=33.5300;InbreedingCoeff=0.4597;MQ=40.73;MQ0=78;MQRankSum=-3.655;QD=12.46;ReadPosRankSum=-2.274;VQSLOD=0.8571;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:33.11:0,33,428	0/0:3,0:3:9.03:0,9,117	./.	./.	0/0:15,0:8:15.05:0,15,194	0/0:22,0:13:24.08:0,24,311	0/0:28,0:13:39.13:0,39,505	1/1:6,5:5:15.05:225,15,0	0/0:18,0:14:39.13:0,39,505	0/0:20,0:14:39.09:0,39,487	0/0:11,0:6:15.05:0,15,195	0/0:6,0:5:12.04:0,12,155	0/0:18,0:10:24.08:0,24,312	0/0:25,0:19:39.11:0,39,492	0/0:8,0:8:12.04:0,12,156	0/0:3,0:3:6.02:0,6,78	0/0:35,0:24:61.08:0,61,780	0/0:33,0:19:48.16:0,48,623	0/0:11,0:8:24.04:0,24,293	0/0:4,0:4:6.02:0,6,78	0/0:5,0:4:12.04:0,12,156	0/0:1,0:1:3.01:0,3,39	0/0:2,0:2:3.01:0,3,39	0/0:16,0:16:36.12:0,36,467	0/0:12,0:7:12.04:0,12,156	0/0:6,0:6:15.05:0,15,193	0/0:3,0:3:3.01:0,3,39	0/0:4,0:4:12.04:0,12,156
chr10	100975719	.	T	TC	201.76	PASS	AB=1.000;AC=9;AF=0.300;AN=30;BaseQRankSum=-2.520;DP=250;FS=7.416;HRun=2;HaplotypeScore=14.9157;InbreedingCoeff=0.4931;MQ=28.45;MQ0=121;MQRankSum=-0.256;QD=12.61;ReadPosRankSum=-2.398;VQSLOD=0.8830;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:5:18.87:19,0,33	./.	./.	./.	./.	./.	0/0:30,0:1:3.01:0,3,39	./.	0/0:22,0:10:30.10:0,30,389	0/0:10,0:3:6:0,6,63	0/0:7,0:1:3.01:0,3,39	1/1:0,2:1:3.01:45,3,0	0/0:21,0:6:18.04:0,18,219	0/0:29,0:10:18.02:0,18,215	./.	./.	0/0:30,0:11:27.93:0,28,333	0/0:31,0:9:18.02:0,18,215	1/1:0,2:2:6.02:90,6,0	./.	0/0:1,0:1:1.25:0,1,3	./.	./.	1/1:1,4:5:6.02:90,6,0	0/0:8,0:3:6.02:0,6,73	1/1:1,1:2:6.01:72,6,0	./.	./.
chr10	100976434	.	A	AT	1272.92	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.598;DP=566;FS=4.797;HRun=9;HaplotypeScore=54.3764;InbreedingCoeff=0.9519;MQ=65.31;MQ0=0;MQRankSum=0.948;QD=24.48;ReadPosRankSum=1.204;VQSLOD=4.5839;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:34:90.04:963,90,0	0/0:10,0:10:23.99:0,24,208	0/0:9,0:9:8.98:0,9,76	0/0:6,0:6:11.99:0,12,104	0/0:33,0:33:74.95:0,75,651	0/0:20,0:20:59.97:0,60,517	0/0:15,0:15:35.99:0,36,313	0/0:23,0:23:53.98:0,54,469	0/0:18,0:18:47.99:0,48,416	0/0:22,0:22:44.95:0,45,391	0/0:22,0:22:56.98:0,57,495	0/0:19,0:19:44.98:0,45,391	0/0:21,0:21:53.99:0,54,469	0/0:19,0:19:44.98:0,45,390	1/1:2,15:17:39.11:431,39,0	0/0:20,0:19:50.99:0,51,443	0/0:20,0:20:59.99:0,60,521	0/0:31,0:31:74.94:0,75,645	0/0:20,0:20:41.99:0,42,365	0/0:31,0:31:77.93:0,78,670	0/0:7,0:7:21:0,21,182	0/0:17,0:17:41.99:0,42,365	0/0:30,0:31:71:0,71,605	0/0:17,0:17:44.96:0,45,386	0/0:22,0:22:50.97:0,51,443	0/0:24,0:22:53.99:0,54,469	0/0:28,0:26:68.93:0,69,592	0/0:9,0:9:26.99:0,27,234
chr10	100977031	.	AT	A	4540.61	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=12.260;DP=638;FS=7.696;HRun=9;HaplotypeScore=65.6772;InbreedingCoeff=0.9307;MQ=70.09;MQ0=0;MQRankSum=0.690;QD=21.94;ReadPosRankSum=-1.315;VQSLOD=5.1071;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:20:47.75:0,48,480	1/1:0,6:6:18.01:165,18,0	0/0:8,0:8:12.04:0,12,139	0/1:11,0:11:5.47:5,0,177	0/0:31,0:31:78.22:0,78,892	0/0:33,0:33:96.25:0,96,1090	0/0:16,0:16:36.11:0,36,415	1/1:8,17:25:50.99:461,51,0	0/0:24,1:25:38.73:0,39,700	0/0:38,0:38:99:0,102,1160	0/0:28,0:28:75.22:0,75,866	0/0:23,0:23:66.20:0,66,762	0/0:32,0:32:93.27:0,93,1069	0/0:26,0:26:69.21:0,69,796	0/0:5,0:27:62.66:0,63,329	1/1:3,18:21:19.41:432,19,0	0/0:15,0:15:42.12:0,42,485	0/0:18,0:18:44.44:0,44,466	1/1:4,15:19:42.01:384,42,0	1/1:1,32:33:90.04:824,90,0	1/1:1,15:16:45.02:412,45,0	0/0:22,0:22:66.19:0,66,753	0/0:31,0:32:70.76:0,71,996	0/0:15,0:15:45.13:0,45,519	0/0:22,0:22:60.18:0,60,693	1/1:2,32:34:93.02:844,93,0	1/1:2,26:28:75.04:686,75,0	1/1:1,12:14:34.30:327,34,0
chr10	100977775	.	G	GCTGT	15139.66	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=0.716;DP=728;FS=3.566;HRun=0;HaplotypeScore=117.7355;InbreedingCoeff=0.9995;MQ=86.82;MQ0=0;MQRankSum=-10.410;QD=63.35;ReadPosRankSum=1.535;VQSLOD=6.5166;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,1857	1/1:2,8:10:24.08:619,24,0	0/0:32,0:32:78.09:0,78,1257	0/0:23,0:22:51.14:0,51,836	0/0:29,0:29:78.21:0,78,1318	0/0:32,0:32:90.31:0,90,1635	0/0:20,0:20:57.18:0,57,1018	1/1:9,30:45:99:2587,108,0	0/0:21,0:21:54.16:0,54,933	0/0:32,0:32:93.31:0,93,1671	0/0:20,0:20:60.10:0,60,1064	0/0:24,0:24:66.21:0,66,1184	0/0:23,0:23:66.21:0,66,1173	0/0:17,0:17:51.17:0,51,917	0/0:33,0:33:93.32:0,93,1700	1/1:2,25:28:69.24:1817,69,0	0/0:21,0:21:63.17:0,63,1081	0/0:16,0:16:45.08:0,45,727	1/1:4,16:23:57.18:1439,57,0	1/1:3,25:30:63.22:1661,63,0	1/1:3,20:23:63.22:1654,63,0	0/0:29,0:29:81.28:0,81,1489	0/0:32,0:32:84.27:0,84,1510	0/0:20,0:20:54.19:0,54,993	0/0:27,0:27:78.27:0,78,1425	1/1:2,28:30:32.10:2126,32,0	1/1:2,33:36:93.32:2445,93,0	1/1:1,10:13:30.10:792,30,0
chr10	100979003	.	TA	T	2292.24	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.188;DP=741;FS=16.386;HRun=2;HaplotypeScore=69.9109;InbreedingCoeff=0.9994;MQ=83.60;MQ0=0;MQRankSum=-4.755;QD=32.29;ReadPosRankSum=2.513;VQSLOD=2.0493;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:96.31:1246,96,0	0/0:9,0:9:27.09:0,27,405	0/0:37,0:37:99:0,105,1469	0/0:30,0:30:87.29:0,87,1262	0/0:23,0:23:66.21:0,66,959	0/0:36,0:36:99:0,105,1574	0/0:26,0:26:78.26:0,78,1152	0/0:32,0:32:96.28:0,96,1374	0/0:30,0:30:90.28:0,90,1309	0/0:26,0:26:78.25:0,78,1141	0/0:28,0:28:84.28:0,84,1254	0/0:30,0:30:90.30:0,90,1331	0/0:27,0:27:81.27:0,81,1204	0/0:34,0:34:99:0,99,1458	1/1:0,34:34:90.29:1168,90,0	0/0:21,0:21:63.21:0,63,923	0/0:27,0:27:78.17:0,78,1090	0/0:14,0:14:42.14:0,42,629	0/0:23,0:23:69.23:0,69,1013	0/0:25,0:25:75.25:0,75,1124	0/0:27,0:27:81.26:0,81,1190	0/0:25,0:25:69.23:0,69,1028	0/0:22,0:22:66.18:0,66,954	0/0:27,0:27:75.25:0,75,1118	0/0:25,0:25:75.25:0,75,1118	0/0:30,0:30:90.29:0,90,1312	0/0:23,0:22:69.23:0,69,1031	0/0:13,0:13:39.13:0,39,579
chr10	100979803	.	ACC	A	1579.80	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.742;DP=585;FS=7.663;HRun=8;HaplotypeScore=80.2583;InbreedingCoeff=0.9980;MQ=79.17;MQ0=0;MQRankSum=-10.773;QD=27.24;ReadPosRankSum=2.607;VQSLOD=3.1992;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,29:36:84.21:1007,84,0	0/0:12,0:12:30.10:0,30,507	0/0:17,0:17:33.40:0,33,600	0/0:22,0:22:53.32:0,53,766	0/0:27,0:27:81.25:0,81,1307	0/0:14,0:14:39.13:0,39,657	0/0:18,0:18:51.17:0,51,852	0/0:21,0:21:51.17:0,51,838	0/0:15,0:15:36.12:0,36,605	0/0:27,0:27:78.27:0,78,1316	0/0:24,0:24:72.25:0,72,1214	0/0:17,0:17:51.17:0,51,862	0/0:22,0:22:66.23:0,66,1116	0/0:21,0:21:60.21:0,60,1013	1/1:4,18:22:57.17:695,57,0	0/0:28,0:28:69.24:0,69,1163	0/0:25,0:25:66.23:0,66,1109	0/0:14,0:14:39.13:0,39,645	0/0:11,0:12:23.57:0,24,364	0/0:22,0:22:63.14:0,63,1057	0/0:22,0:22:63.20:0,63,1037	0/0:10,0:10:30.10:0,30,507	0/0:25,0:25:72.22:0,72,1184	0/0:22,0:22:60.16:0,60,982	0/0:22,0:22:66.21:0,66,1090	0/0:18,0:18:54.18:0,54,878	0/0:28,0:28:78.27:0,78,1319	0/0:22,0:22:66.23:0,66,1101
chr10	100979816	.	ACAT	A	1994.60	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.844;DP=587;FS=9.447;HRun=0;HaplotypeScore=90.8183;InbreedingCoeff=0.9996;MQ=83.86;MQ0=0;MQRankSum=-10.654;QD=41.55;ReadPosRankSum=1.984;VQSLOD=4.8560;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:72.25:1155,72,0	0/0:13,0:13:33.11:0,33,703	0/0:23,0:23:57.20:0,57,1164	0/0:20,0:20:54.18:0,54,1085	0/0:29,0:29:81.28:0,81,1788	0/0:14,0:14:33.11:0,33,726	0/0:21,0:21:63.22:0,63,1369	0/0:22,0:22:60.21:0,60,1324	0/0:12,0:12:36.12:0,36,795	0/0:30,0:30:84.29:0,84,1846	0/0:31,0:31:90.31:0,90,1986	0/0:19,0:19:51.18:0,51,1124	0/0:22,0:22:54.17:0,54,1149	0/0:21,0:21:60.21:0,60,1299	1/1:0,20:20:60.20:962,60,0	0/0:22,0:22:66.23:0,66,1411	0/0:18,0:18:48.16:0,48,1059	0/0:15,0:15:45.15:0,45,993	0/0:13,0:13:39.13:0,39,839	0/0:22,0:22:56.49:0,56,1252	0/0:21,0:21:60.21:0,60,1319	0/0:13,0:13:36.12:0,36,788	0/0:24,0:24:63.22:0,63,1391	0/0:18,0:18:54.19:0,54,1192	0/0:23,0:23:66.23:0,66,1457	0/0:24,0:24:72.25:0,72,1584	0/0:27,0:27:81.28:0,81,1786	0/0:22,0:22:66.16:0,66,1279
chr10	100980075	.	G	GA	894.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.345;DP=532;FS=5.522;HRun=1;HaplotypeScore=65.5034;InbreedingCoeff=0.9970;MQ=67.94;MQ0=0;MQRankSum=-0.288;QD=37.25;ReadPosRankSum=1.158;VQSLOD=4.1977;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.20:0,72,904	0/0:16,0:16:48.13:0,48,606	0/0:15,0:15:42.08:0,42,518	0/0:18,0:18:51.04:0,51,610	0/0:26,0:26:78.25:0,78,1012	0/0:29,0:29:84.26:0,84,1075	0/0:15,0:15:45.12:0,45,556	0/0:34,0:34:99:0,99,1248	0/0:20,0:20:60.20:0,60,778	0/0:24,0:24:72.21:0,72,918	0/0:13,0:13:36.10:0,36,452	0/0:19,0:19:57.19:0,57,740	0/0:17,0:17:51.14:0,51,645	0/0:20,0:20:60.18:0,60,763	1/1:0,24:24:66.22:989,66,0	0/0:15,0:15:42.12:0,42,531	0/0:17,0:16:51.10:0,51,641	0/0:12,0:12:36.12:0,36,465	0/0:12,0:12:33.10:0,33,416	0/0:30,0:30:84.26:0,84,1075	0/0:17,0:17:48.13:0,48,594	0/0:11,0:11:33.11:0,33,428	0/0:21,0:21:60.18:0,60,764	0/0:8,0:8:24.08:0,24,312	0/0:14,0:14:42.14:0,42,545	0/0:20,0:20:60.18:0,60,765	0/0:25,0:25:75.24:0,75,974	0/0:12,0:12:36.12:0,36,466
chr10	100980467	.	A	AT	5918.67	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=16.592;DP=500;FS=0.000;HRun=7;HaplotypeScore=77.8837;InbreedingCoeff=0.9659;MQ=60.32;MQ0=1;MQRankSum=-1.565;QD=30.20;ReadPosRankSum=-1.391;VQSLOD=4.5025;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:29:69.17:812,69,0	1/1:1,8:9:21.06:252,21,0	0/0:2,0:2:5.99:0,6,52	0/0:6,0:4:6.01:0,6,58	0/0:28,0:28:78.11:0,78,746	0/0:23,0:23:66.11:0,66,637	0/0:10,0:10:21.03:0,21,203	1/1:4,26:30:84.59:948,85,0	0/0:14,0:14:36.06:0,36,348	0/0:35,0:35:87.12:0,87,840	0/0:16,0:16:45.06:0,45,430	0/0:17,0:17:39.02:0,39,367	0/0:22,0:22:60.08:0,60,573	0/0:18,0:18:45.05:0,45,425	0/0:12,0:12:22.23:0,22,98	1/1:1,8:9:27.04:308,27,0	0/0:19,0:19:48.07:0,48,464	0/0:15,0:15:39.03:0,39,370	1/1:2,20:22:63.19:746,63,0	1/1:4,19:23:60.18:710,60,0	1/1:2,7:9:18:199,18,0	0/0:16,0:16:39.06:0,39,377	0/0:21,0:21:57.08:0,57,546	0/0:15,0:15:42.07:0,42,406	0/0:15,0:15:39.05:0,39,373	1/1:1,18:20:57.13:655,57,0	1/1:6,23:29:78.13:892,78,0	1/1:2,13:15:33.10:396,33,0
chr10	100982980	.	T	TAAACAC	2031.29	PASS	AB=0.961;AC=13;AF=0.232;AN=56;BaseQRankSum=7.959;DP=620;FS=25.408;HRun=0;HaplotypeScore=164.3488;InbreedingCoeff=-0.1136;MQ=62.76;MQ0=8;MQRankSum=-4.292;QD=7.52;ReadPosRankSum=-3.127;VQSLOD=0.5656;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:99:108,0,190	1/1:6,0:6:11.96:255,12,0	0/0:44,0:28:49.42:0,49,525	0/0:23,0:18:22.27:0,22,292	0/0:27,0:27:68.48:0,68,880	0/0:27,0:27:53.82:0,54,821	0/0:20,0:20:43.50:0,43,432	0/0:22,0:22:19.10:0,19,297	0/0:12,0:12:33.03:0,33,531	0/0:32,0:31:71.41:0,71,1013	0/0:21,0:21:50.89:0,51,901	0/1:19,0:17:41.58:46,0,42	0/0:14,0:14:36.98:0,37,255	0/0:20,0:20:50.91:0,51,627	0/0:24,0:24:42.03:0,42,518	0/1:15,0:15:80.33:140,0,80	0/0:12,0:12:26.90:0,27,295	0/0:12,0:12:28.37:0,28,345	0/1:14,3:18:99:142,0,122	0/1:19,0:19:49.88:312,0,50	0/1:28,0:28:28.51:29,0,112	0/1:34,0:34:39.55:40,0,272	0/0:20,0:18:14.96:0,15,119	0/1:30,0:29:32.95:33,0,152	0/0:20,0:20:47.97:0,48,646	0/1:21,7:30:99:364,0,272	0/1:23,0:23:90.07:471,0,90	0/1:19,0:19:43.87:250,0,44
chr10	100983621	.	A	AAACAC	2517.46	PASS	AB=0.683;AC=13;AF=0.232;AN=56;BaseQRankSum=7.077;DP=565;FS=2.719;HRun=0;HaplotypeScore=131.1590;InbreedingCoeff=0.0921;MQ=60.64;MQ0=7;MQRankSum=-1.591;QD=11.99;ReadPosRankSum=1.732;VQSLOD=2.7972;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:24:99:164,0,118	1/1:1,0:8:18.06:272,18,0	0/0:29,0:22:53.62:0,54,755	0/0:27,0:17:37.69:0,38,489	0/0:24,0:25:63.21:0,63,1302	0/0:21,0:20:57.19:0,57,1048	0/0:18,0:18:47.71:0,48,826	0/1:19,0:19:22.34:22,0,364	0/0:21,0:22:60.20:0,60,1152	0/0:11,0:11:30.09:0,30,559	0/0:28,0:29:63.21:0,63,1294	0/0:5,0:12:15.03:0,15,197	0/0:16,0:17:42.14:0,42,750	0/0:20,0:21:57.15:0,57,1174	0/1:3,1:11:85.81:86,0,92	0/1:5,0:14:79.87:191,0,80	0/0:29,0:29:41.13:0,41,1194	0/0:16,0:16:23.90:0,24,323	0/1:7,0:11:99:164,0,121	0/1:8,0:29:86.10:467,0,86	1/1:1,0:15:18.06:219,18,0	0/0:2,0:15:30.09:0,30,421	0/0:7,0:25:57.02:0,57,808	0/0:3,0:14:27.05:0,27,382	0/0:21,0:21:48.15:0,48,927	0/1:10,0:23:99:361,0,315	0/1:7,0:35:47.59:574,0,48	0/1:3,0:19:39.27:164,0,39
chr10	100985065	.	G	GGTGTGT	5026.81	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=2.195;DP=592;FS=6.041;HRun=0;HaplotypeScore=154.9571;InbreedingCoeff=0.8088;MQ=59.04;MQ0=7;MQRankSum=-3.048;QD=21.95;ReadPosRankSum=-4.953;VQSLOD=3.2529;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:12.04:213,12,0	1/1:11,0:11:18.06:427,18,0	0/0:25,0:14:9.03:0,9,167	0/0:17,0:11:7.57:0,8,101	0/0:20,0:20:42.13:0,42,791	0/0:26,0:27:54.17:0,54,1011	0/0:25,0:24:39.10:0,39,745	1/1:34,0:38:53.19:940,53,0	0/0:10,0:11:20.37:0,20,370	0/0:26,0:25:24.97:0,25,787	0/0:19,0:18:36.07:0,36,627	0/0:26,0:26:41.13:0,41,768	0/0:19,0:19:42.14:0,42,825	0/0:20,0:20:33.07:0,33,585	0/0:19,0:19:37.28:0,37,637	1/1:6,7:19:5.63:122,6,0	0/0:22,0:23:45.06:0,45,762	0/1:9,0:7:11.18:11,0,154	1/1:10,0:12:12.04:222,12,0	1/1:8,17:29:5.99:71,6,0	1/1:8,1:8:8.99:78,9,0	0/0:29,0:29:41.81:0,42,816	0/0:15,0:15:17.96:0,18,299	0/0:15,0:15:12.04:0,12,248	0/0:25,0:26:57.10:0,57,1046	1/1:36,0:46:96.05:1980,96,0	1/1:20,0:22:0.61:835,1,0	1/1:6,0:6:11.95:129,12,0
chr10	100985091	.	TGAGA	T	825.82	PASS	AB=0.971;AC=10;AF=0.192;AN=52;BaseQRankSum=1.706;DP=572;FS=31.785;HRun=0;HaplotypeScore=145.7607;InbreedingCoeff=0.5837;MQ=48.85;MQ0=18;MQRankSum=0.992;QD=7.06;ReadPosRankSum=3.123;VQSLOD=1.4137;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:2.99:0,3,24	0/0:16,0:15:22.58:0,23,345	./.	./.	0/0:21,0:21:51.14:0,51,992	0/0:31,0:30:75.50:0,75,1422	0/0:24,0:23:27.56:0,28,547	0/0:28,0:28:47.57:0,48,419	0/0:12,0:11:1.39:0,1,467	0/0:25,0:25:49.66:0,50,919	0/1:15,0:15:7.88:8,0,501	1/1:22,4:26:31.52:402,32,0	0/0:17,0:17:36.12:0,36,775	0/0:11,0:15:32.57:0,33,541	0/0:26,0:25:4.86:0,5,112	0/0:21,0:22:21.07:0,21,339	0/0:20,0:20:27.39:0,27,531	0/1:11,0:9:24.57:25,0,185	0/0:12,0:9:20.82:0,21,235	0/0:24,0:24:12.04:0,12,207	0/0:9,0:6:9.03:0,9,144	1/1:23,5:28:30.24:321,30,0	1/1:19,2:20:12.04:196,12,0	1/1:11,0:15:2.78:25,3,0	0/0:29,0:29:52.14:0,52,1010	0/0:46,0:43:65.82:0,66,812	0/0:20,0:23:12.03:0,12,457	0/0:6,0:6:15:0,15,222
chr10	100985130	.	GAGAGAGAGAC	G	951.18	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=4.432;DP=570;FS=13.045;HRun=0;HaplotypeScore=200.6390;InbreedingCoeff=0.3004;MQ=58.14;MQ0=17;MQRankSum=0.494;QD=4.30;ReadPosRankSum=-6.803;VQSLOD=-0.6326;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:20:20.19:20,0,23	0/0:12,0:11:27.01:0,27,981	0/0:19,0:9:21.54:0,22,357	0/0:32,0:16:30.76:0,31,425	0/0:31,0:31:54.26:0,54,2809	0/0:35,0:34:81.26:0,81,3094	0/0:24,0:22:42.14:0,42,1758	0/1:19,0:18:99:124,0,217	0/0:14,0:13:27.08:0,27,1004	0/0:22,0:22:63.21:0,63,2456	0/0:11,0:11:30.10:0,30,1185	1/1:9,12:21:21.95:436,22,0	0/0:22,0:22:60.20:0,60,1983	0/0:17,0:17:39.12:0,39,1231	0/1:29,0:28:99:135,0,154	0/1:18,0:18:85.61:86,0,606	0/0:18,0:18:29.23:0,29,1490	0/1:9,0:8:28.14:28,0,818	0/0:14,0:14:5.07:0,5,690	0/0:13,0:13:2.28:0,2,548	0/0:8,0:6:14.90:0,15,418	1/1:6,17:23:2.13:5,2,0	1/1:13,14:26:8.80:89,9,0	1/1:13,5:18:7.12:165,7,0	0/0:23,0:23:51.60:0,52,1855	0/1:34,0:31:25.56:26,0,1285	0/0:26,0:24:39.16:0,39,1449	0/0:7,0:7:21.07:0,21,702
chr10	100985140	.	C	CAG	5780.27	PASS	AB=0.854;AC=27;AF=0.482;AN=56;BaseQRankSum=-2.116;DP=553;FS=5.445;HRun=0;HaplotypeScore=113.6698;InbreedingCoeff=0.7290;MQ=64.42;MQ0=12;MQRankSum=-0.756;QD=21.57;ReadPosRankSum=0.260;VQSLOD=4.9815;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:23:17.64:177,18,0	1/1:1,10:11:27.09:446,27,0	0/0:24,0:14:30.09:0,30,358	0/0:41,0:24:49.83:0,50,480	0/0:28,0:28:69.15:0,69,818	0/0:30,0:31:63.03:0,63,763	0/0:22,0:21:45.14:0,45,562	1/1:18,9:26:31.65:949,32,0	0/0:14,0:13:24.08:0,24,300	0/0:24,0:24:51.16:0,51,638	0/0:9,0:10:23.89:0,24,264	0/1:19,0:19:1.03:61,0,1	0/0:20,0:20:51.16:0,51,635	0/0:14,0:14:39.12:0,39,487	1/1:28,0:27:42.17:276,42,0	1/1:8,6:14:30.03:454,30,0	0/0:18,0:18:18.44:0,18,397	0/1:8,0:7:28.15:28,0,202	1/1:3,12:15:1.60:539,2,0	1/1:8,7:15:36.11:548,36,0	0/1:2,7:8:19.11:230,0,19	0/0:18,0:18:0.47:0,0,1	1/1:17,0:17:0.47:1,0,0	1/1:16,1:17:8.96:120,9,0	0/0:21,0:21:41.87:0,42,525	1/1:17,12:27:39.68:814,40,0	1/1:4,23:26:51.17:842,51,0	1/1:1,6:7:18.06:297,18,0
chr10	100985146	.	G	GAC	2320.96	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=10.023;DP=556;FS=18.102;HRun=0;HaplotypeScore=120.5862;InbreedingCoeff=0.2690;MQ=72.66;MQ0=11;MQRankSum=0.847;QD=8.82;ReadPosRankSum=3.524;VQSLOD=1.8530;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,21:26:18.05:316,18,0	1/1:11,0:11:26.98:227,27,0	0/0:28,0:18:45:0,45,591	0/0:48,0:31:59.20:0,59,738	0/0:27,0:27:72.23:0,72,1070	0/0:30,0:30:81.12:0,81,1079	0/0:22,0:21:48.15:0,48,713	0/1:33,0:32:99:332,0,156	0/0:13,0:12:27.08:0,27,392	0/0:25,0:25:63.19:0,63,897	0/0:11,0:11:33.02:0,33,413	0/1:12,0:12:8.73:25,0,9	0/0:20,0:20:57.16:0,57,828	0/0:13,0:13:39.13:0,39,594	0/1:26,0:25:3.71:4,0,103	1/1:14,0:14:26.91:212,27,0	0/0:17,0:17:44.62:0,45,598	0/1:8,0:7:5.17:5,0,253	0/1:16,0:16:48.04:217,0,48	1/1:14,0:14:10.60:228,11,0	0/1:9,0:8:27.84:108,0,28	0/0:19,0:19:6.46:0,6,51	1/1:15,0:15:0.47:1,0,0	0/1:16,0:16:15.08:38,0,15	0/0:20,0:20:51.12:0,51,715	0/1:27,0:26:99:286,0,108	0/1:28,0:27:10.16:363,0,10	1/1:7,0:7:1.19:137,1,0
chr10	100987018	.	A	AT	767.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.932;DP=563;FS=1.926;HRun=0;HaplotypeScore=51.8568;InbreedingCoeff=0.9830;MQ=77.15;MQ0=0;MQRankSum=-1.189;QD=40.41;ReadPosRankSum=0.416;VQSLOD=3.9881;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:54.18:863,54,0	0/0:11,0:11:33.08:0,33,442	0/0:17,0:17:44.88:0,45,583	0/0:6,0:6:18.06:0,18,252	0/0:27,0:27:81.27:0,81,1133	0/0:25,0:25:71.87:0,72,990	0/0:16,0:16:48.14:0,48,653	0/0:29,0:29:84.28:0,84,1175	0/0:15,0:15:45.15:0,45,629	0/0:24,0:24:72.23:0,72,990	0/0:29,0:29:87.29:0,87,1216	0/0:23,0:23:69.21:0,69,933	0/0:22,0:22:66.22:0,66,922	0/0:18,0:18:54.18:0,54,755	0/0:24,0:24:69.23:0,69,965	0/0:23,0:23:69.23:0,69,965	0/0:24,0:24:69.20:0,69,944	0/0:9,0:9:27.09:0,27,373	0/0:15,0:15:45.15:0,45,629	0/0:29,0:29:87.29:0,87,1206	0/0:18,0:18:51.15:0,51,693	0/0:20,0:20:60.19:0,60,824	0/0:18,0:18:54.18:0,54,754	0/0:18,0:18:54.18:0,54,755	0/0:21,0:21:63.21:0,63,881	0/0:27,0:27:75.25:0,75,1049	0/0:30,0:28:90.29:0,90,1242	0/0:6,0:6:18.06:0,18,252
chr10	100988996	.	AT	A	1617.22	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.887;DP=730;FS=5.627;HRun=2;HaplotypeScore=68.3761;InbreedingCoeff=0.9977;MQ=65.08;MQ0=0;MQRankSum=-2.885;QD=31.71;ReadPosRankSum=1.867;VQSLOD=3.3443;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,51:50:99:1712,132,0	0/0:12,0:12:36.12:0,36,537	0/0:22,0:21:63.19:0,63,891	0/0:23,0:20:57.17:0,57,751	0/0:32,0:32:96.32:0,96,1428	0/0:19,0:19:57.19:0,57,854	0/0:22,0:22:66.22:0,66,989	0/0:33,0:33:96.25:0,96,1317	0/0:17,0:17:48.15:0,48,698	0/0:29,0:29:84.28:0,84,1238	0/0:17,0:17:48.16:0,48,719	0/0:31,0:31:93.30:0,93,1375	0/0:25,0:25:75.25:0,75,1110	0/0:29,0:29:87.29:0,87,1303	0/0:36,0:36:99:0,108,1617	0/0:27,0:27:78.26:0,78,1169	0/0:38,0:38:99:0,108,1618	0/0:28,0:28:78.23:0,78,1143	0/0:21,0:21:60.18:0,60,856	0/0:13,0:13:39.13:0,39,579	0/0:50,0:49:99:0,147,2142	0/0:20,0:20:60.20:0,60,898	0/0:26,0:26:78.26:0,78,1169	0/0:30,0:30:90.24:0,90,1303	0/0:13,0:13:39.13:0,39,584	0/0:22,0:22:66.22:0,66,971	0/0:36,0:36:99:0,105,1570	0/0:8,0:8:24.08:0,24,360
chr10	100989672	.	T	TC	5081.45	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-1.280;DP=807;FS=6.488;HRun=1;HaplotypeScore=75.1833;InbreedingCoeff=0.9997;MQ=58.52;MQ0=2;MQRankSum=2.581;QD=39.09;ReadPosRankSum=2.610;VQSLOD=5.5719;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:33:75.25:1123,75,0	0/0:9,0:9:27.08:0,27,337	0/0:24,0:16:37.77:0,38,478	0/0:31,0:26:71.99:0,72,861	0/0:38,0:38:99:0,111,1422	0/0:46,0:46:99:0,135,1722	0/0:20,0:20:57.17:0,57,726	0/0:37,0:37:99:0,108,1355	0/0:32,0:32:90.28:0,90,1155	0/0:25,0:25:75.23:0,75,954	0/0:26,0:26:72.22:0,72,920	1/1:0,22:22:60.20:899,60,0	0/0:37,0:37:99:0,111,1435	0/0:30,0:30:90.28:0,90,1153	0/0:33,0:33:99:0,99,1271	0/0:20,0:20:60.20:0,60,779	0/0:38,0:38:99:0,111,1418	0/0:27,0:27:69.11:0,69,828	0/0:29,0:24:69.21:0,69,870	0/0:28,0:28:78.23:0,78,984	0/0:27,0:27:78.24:0,78,998	1/1:0,24:24:72.16:1043,72,0	1/1:0,29:29:81.27:1208,81,0	1/1:0,22:21:54.18:809,54,0	0/0:32,0:32:96.27:0,96,1191	0/0:32,0:32:96.28:0,96,1189	0/0:36,0:36:99:0,108,1373	0/0:20,0:20:60.20:0,60,779
chr10	100991371	.	GCA	G	403.71	PASS	AB=0.912;AC=21;AF=0.438;AN=48;BaseQRankSum=1.511;DP=544;FS=0.848;HRun=0;HaplotypeScore=89.7973;InbreedingCoeff=0.0407;MQ=61.68;MQ0=15;MQRankSum=-0.101;QD=1.31;ReadPosRankSum=2.027;VQSLOD=1.6836;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:32:11.21:0,11,73	1/1:10,0:10:2.83:20,3,0	./.	./.	0/0:11,0:11:14.97:0,15,146	0/1:15,5:21:14.21:14,0,171	0/1:13,0:20:10.17:10,0,135	./.	1/1:6,5:13:17.38:156,17,0	0/0:16,0:16:11.76:0,12,124	0/0:18,0:20:9.02:0,9,114	0/0:19,0:18:7.14:0,7,32	0/1:25,1:24:1.97:2,0,345	0/1:15,3:18:60.18:60,0,87	0/1:26,0:26:13.98:14,0,188	0/1:17,0:18:32.39:42,0,32	0/1:25,3:28:70.11:70,0,198	0/1:13,2:13:20.05:20,0,91	0/1:16,0:16:20.53:21,0,32	./.	1/1:23,0:25:5.84:46,6,0	0/0:29,0:27:16.48:0,16,108	0/1:15,0:14:0:0,0,0	0/1:25,0:22:0.31:0,0,0	0/0:12,0:12:6.02:0,6,86	1/1:13,1:13:3:32,3,0	1/1:14,1:16:3.06:41,3,0	0/0:11,0:8:6.49:0,6,86
chr10	100992638	.	TTTC	T	2285.56	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=2.857;DP=549;FS=3.762;HRun=0;HaplotypeScore=106.8081;InbreedingCoeff=0.9890;MQ=75.75;MQ0=6;MQRankSum=-2.575;QD=28.57;ReadPosRankSum=-0.072;VQSLOD=3.8282;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:14.85:475,15,0	0/0:8,0:8:23.95:0,24,193	0/0:32,0:25:26.58:0,27,401	0/0:20,0:11:20.10:0,20,243	0/0:32,0:32:93.20:0,93,1618	0/0:26,0:26:75.21:0,75,1359	0/0:13,0:13:39.10:0,39,689	0/0:28,0:28:75.15:0,75,654	0/0:24,0:24:72.17:0,72,1207	0/0:26,0:26:78.09:0,78,1318	0/0:25,0:25:72.19:0,72,1251	1/1:3,13:16:36.12:569,36,0	0/0:22,0:22:63.14:0,63,1094	0/0:20,0:20:57.13:0,57,953	0/0:20,0:19:53.76:0,54,446	0/0:20,0:20:52.71:0,53,419	0/0:11,0:11:30:0,30,463	0/0:9,0:9:26.99:0,27,397	0/0:18,0:18:47.19:0,47,390	0/0:27,0:27:68.52:0,69,542	0/0:8,0:8:20.92:0,21,197	1/1:6,7:13:39.05:500,39,0	1/1:0,22:22:48.12:779,48,0	1/1:5,0:5:15.01:136,15,0	0/0:20,0:20:54.08:0,54,893	0/0:24,0:24:70.09:0,70,646	0/0:24,0:23:49.08:0,49,407	0/0:12,0:12:35.88:0,36,280
chr10	100992640	.	TC	T	1263.55	PASS	AB=0.969;AC=11;AF=0.196;AN=56;BaseQRankSum=5.182;DP=548;FS=6.990;HRun=1;HaplotypeScore=91.4385;InbreedingCoeff=0.8967;MQ=74.29;MQ0=6;MQRankSum=-1.328;QD=11.28;ReadPosRankSum=-0.468;VQSLOD=1.3669;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:31.12:358,31,0	0/0:9,0:9:23.76:0,24,173	0/1:30,1:24:2.11:2,0,159	0/0:19,0:10:16.40:0,16,155	0/0:33,0:33:89.59:0,90,1020	0/0:27,0:27:78.03:0,78,866	0/0:13,0:13:39.01:0,39,428	0/0:28,0:28:75.76:0,76,552	0/0:24,0:24:69.96:0,70,765	0/0:27,0:27:80.10:0,80,883	0/0:25,0:25:71.03:0,71,777	1/1:16,0:16:35.88:282,36,0	0/0:21,0:21:52.18:0,52,649	0/0:20,0:20:56.26:0,56,615	0/0:20,0:19:51.53:0,52,348	0/0:20,0:20:49.99:0,50,344	0/0:11,0:11:23.94:0,24,264	0/0:9,0:9:7.02:0,7,219	0/0:19,0:19:34.41:0,34,327	0/0:26,0:26:68.02:0,68,478	0/0:7,0:7:20.76:0,21,145	1/1:14,0:14:40.16:325,40,0	1/1:22,0:22:47.87:383,48,0	1/1:5,0:5:11.49:85,11,0	0/0:19,0:19:53.96:0,54,562	0/0:24,0:24:63.70:0,64,503	0/0:22,1:22:22.33:0,22,296	0/0:12,0:12:35.54:0,36,238
chr10	100992652	.	TTA	T	6059.30	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=6.105;DP=527;FS=1.110;HRun=0;HaplotypeScore=80.8828;InbreedingCoeff=0.9668;MQ=75.18;MQ0=5;MQRankSum=1.041;QD=29.70;ReadPosRankSum=0.488;VQSLOD=5.8521;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,10:26:42.19:354,42,0	1/1:0,7:7:21.03:265,21,0	0/0:29,1:22:34.90:0,35,588	0/0:13,0:8:5.74:0,6,101	0/0:37,0:37:99:0,108,1641	0/0:27,0:27:78.23:0,78,1281	0/0:15,0:15:45.11:0,45,681	1/1:1,25:26:77.34:908,77,0	0/0:22,0:22:66.10:0,66,1071	0/0:26,0:26:78.07:0,78,1169	0/0:26,0:26:75.20:0,75,1158	0/0:15,0:15:36.73:0,37,205	0/0:23,0:23:69.16:0,69,1053	0/0:17,0:17:48.03:0,48,764	1/1:0,18:17:42.14:571,42,0	1/1:1,23:24:51.01:654,51,0	0/0:10,0:10:29.87:0,30,434	0/0:10,0:10:30.02:0,30,425	1/1:1,21:22:66.03:731,66,0	1/1:0,25:25:74.79:845,75,0	1/1:0,4:4:9.03:122,9,0	0/0:11,0:11:28.75:0,29,200	0/0:23,0:23:55.92:0,56,333	0/0:4,0:4:9.47:0,9,93	0/0:14,0:14:39.11:0,39,629	1/1:1,16:17:20.66:564,21,0	1/1:2,21:22:47.14:596,47,0	1/1:0,12:12:33.11:449,33,0
chr10	100992815	.	GT	G	3736.15	PASS	AB=0.760;AC=18;AF=0.321;AN=56;BaseQRankSum=6.469;DP=634;FS=18.117;HRun=10;HaplotypeScore=76.7584;InbreedingCoeff=0.7990;MQ=73.65;MQ0=2;MQRankSum=1.917;QD=15.90;ReadPosRankSum=2.132;VQSLOD=2.6339;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:34:68.14:0,68,372	1/1:0,8:8:20.87:182,21,0	0/0:40,1:24:0.72:0,1,191	0/1:42,1:26:34.61:35,0,215	0/0:28,0:28:71.86:0,72,766	0/0:20,0:20:54.11:0,54,577	0/0:16,0:17:51.02:0,51,536	1/1:7,26:32:63.19:587,63,0	0/0:20,0:21:63:0,63,678	0/0:20,0:20:54.15:0,54,597	0/0:18,0:18:42.11:0,42,462	0/0:23,0:23:57.13:0,57,614	0/0:23,0:23:66.15:0,66,707	0/0:24,0:24:64.42:0,64,699	0/0:17,0:17:48.10:0,48,519	1/1:1,20:21:17.81:384,18,0	0/0:22,0:22:37.47:0,37,624	0/0:22,0:21:53.68:0,54,556	0/1:3,16:19:18.41:309,0,18	1/1:7,22:29:71.64:600,72,0	1/1:1,17:18:35.99:313,36,0	0/0:15,0:15:36.10:0,36,398	0/0:15,0:16:44.97:0,45,449	0/0:20,0:20:51.14:0,51,564	0/0:18,0:18:51.12:0,51,553	1/1:3,19:22:56.97:495,57,0	1/1:2,28:30:77.90:677,78,0	1/1:4,8:12:17.99:156,18,0
chr10	100993388	.	A	AT	2927.45	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-11.553;DP=679;FS=1.943;HRun=6;HaplotypeScore=61.9393;InbreedingCoeff=0.9972;MQ=80.63;MQ0=0;MQRankSum=-1.791;QD=31.14;ReadPosRankSum=1.989;VQSLOD=4.3707;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.11:0,72,712	0/0:8,0:8:18.04:0,18,184	0/0:23,0:23:62.80:0,63,613	0/0:15,0:14:24.47:0,24,228	0/0:27,0:27:75.16:0,75,764	0/0:25,0:25:75.17:0,75,764	0/0:19,0:19:54.11:0,54,545	0/0:30,0:30:78.17:0,78,791	0/0:14,0:14:42.10:0,42,429	0/0:24,0:24:66.15:0,66,673	0/0:41,0:41:99:0,117,1193	1/1:0,20:20:54.17:679,54,0	0/0:28,0:28:84.18:0,84,850	0/0:29,0:29:87.17:0,87,879	0/0:35,0:35:96.21:0,96,979	0/0:21,0:21:60.14:0,60,612	0/0:31,0:31:87.16:0,87,878	0/0:13,0:13:36.07:0,36,361	0/0:25,0:25:46.23:0,46,617	0/0:31,0:31:93.21:0,93,948	0/0:21,0:21:60.11:0,60,604	1/1:0,18:18:51.12:624,51,0	1/1:3,22:25:60.19:748,60,0	1/1:3,28:31:85.41:1038,85,0	0/0:18,0:18:48.11:0,48,490	0/0:30,0:30:87.19:0,87,886	0/0:30,0:30:84.19:0,84,857	0/0:21,0:21:63.14:0,63,642
chr10	100993892	.	G	GA	8189.39	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-4.412;DP=591;FS=12.195;HRun=7;HaplotypeScore=65.6506;InbreedingCoeff=0.9905;MQ=79.58;MQ0=0;MQRankSum=-1.920;QD=25.12;ReadPosRankSum=2.169;VQSLOD=4.6792;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:28:74.68:379,75,0	1/1:0,4:4:9.03:109,9,0	0/0:18,0:18:42.06:0,42,404	0/0:12,0:12:29.87:0,30,285	0/0:33,0:33:87.13:0,87,840	0/0:24,0:24:57.08:0,57,550	0/0:16,0:16:39.06:0,39,376	1/1:3,37:40:99:1305,111,0	0/0:17,0:17:42.07:0,42,405	0/0:27,0:27:72.11:0,72,695	0/0:29,0:29:81.10:0,81,775	1/1:1,0:17:43.09:219,43,0	0/0:12,0:12:33.05:0,33,319	0/0:19,0:19:57.07:0,57,539	1/1:3,14:17:42.13:507,42,0	1/1:1,15:16:42.13:507,42,0	0/0:25,0:25:66.10:0,66,637	0/0:10,0:10:17.99:0,18,165	1/1:3,18:21:51.14:605,51,0	1/1:3,28:31:55.24:931,55,0	1/1:0,13:13:33.10:399,33,0	1/1:0,1:28:74.81:385,75,0	1/1:3,0:18:40.25:205,40,0	1/1:2,0:12:25.84:131,26,0	0/0:23,0:23:63.10:0,63,608	1/1:4,24:28:46.26:840,46,0	1/1:4,29:33:77.92:941,78,0	1/1:0,20:20:60.18:725,60,0
chr10	100994442	.	G	GA	3448.53	PASS	AB=0.563;AC=19;AF=0.339;AN=56;BaseQRankSum=5.878;DP=424;FS=4.978;HRun=5;HaplotypeScore=74.7044;InbreedingCoeff=0.8478;MQ=63.02;MQ0=23;MQRankSum=-8.904;QD=31.64;ReadPosRankSum=2.147;VQSLOD=4.4567;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:30.94:0,31,335	1/1:0,5:5:15.05:209,15,0	0/0:14,0:12:33.10:0,33,392	0/0:7,0:6:5.93:0,6,53	0/0:23,0:23:63.66:0,64,748	0/0:24,0:23:49.32:0,49,678	0/0:12,0:11:26.85:0,27,279	1/1:3,6:9:24.08:333,24,0	0/0:14,0:14:39.10:0,39,449	0/0:20,0:20:57.17:0,57,684	0/0:20,0:20:57.10:0,57,629	0/0:14,0:13:36.11:0,36,429	0/0:16,0:15:39.04:0,39,449	0/0:18,0:17:42.13:0,42,504	1/1:2,11:11:27.09:376,27,0	0/1:2,7:8:11.93:268,0,12	0/0:26,0:21:59.65:0,60,670	0/0:13,0:10:20.74:0,21,213	1/1:4,14:16:5.44:543,5,0	1/1:3,7:10:24.08:334,24,0	1/1:4,3:3:9.03:125,9,0	0/0:13,0:13:30.09:0,30,359	0/0:13,0:12:33.10:0,33,395	0/0:24,0:19:29.88:0,30,339	0/0:30,0:28:80.98:0,81,948	1/1:2,15:17:45.15:628,45,0	1/1:1,18:18:45.15:628,45,0	1/1:2,0:2:1.55:4,2,0
chr10	100994472	.	AAG	A	698.57	PASS	AB=0.757;AC=10;AF=0.200;AN=50;BaseQRankSum=4.768;DP=402;FS=6.186;HRun=0;HaplotypeScore=86.1225;InbreedingCoeff=0.1675;MQ=38.80;MQ0=120;MQRankSum=-5.683;QD=7.28;ReadPosRankSum=-2.828;VQSLOD=2.2197;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:8:23.99:0,24,273	0/1:4,2:6:49.35:49,0,143	./.	./.	0/0:21,0:18:41.68:0,42,659	0/0:22,0:21:47.64:0,48,533	0/0:13,0:11:26.83:0,27,315	1/1:4,4:2:6.02:70,6,0	0/0:12,0:10:27.04:0,27,398	0/0:16,0:12:36.12:0,36,540	0/0:21,0:14:38.48:0,38,376	0/0:11,0:9:27.06:0,27,415	0/0:15,0:9:24.07:0,24,352	0/0:20,0:13:30.09:0,30,420	0/0:12,0:9:23.96:0,24,239	0/1:7,5:11:99:142,0,146	0/0:27,0:10:30.05:0,30,471	0/0:17,0:7:15.03:0,15,224	0/1:10,2:9:48.97:49,0,183	0/1:6,7:12:99:201,0,169	1/1:5,3:3:6.01:68,6,0	0/0:5,0:5:15.05:0,15,222	0/0:10,0:6:18.06:0,18,278	0/0:30,0:13:16.86:0,17,231	0/0:30,0:20:60.20:0,60,937	0/1:13,6:16:99:161,0,307	0/1:14,4:14:99:100,0,310	./.
chr10	100994478	.	G	GA	947.40	PASS	AB=0.752;AC=10;AF=0.200;AN=50;BaseQRankSum=2.864;DP=410;FS=4.189;HRun=3;HaplotypeScore=76.9047;InbreedingCoeff=0.1939;MQ=37.03;MQ0=132;MQRankSum=-6.663;QD=8.38;ReadPosRankSum=-3.759;VQSLOD=-0.4210;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:8:24.07:0,24,282	0/1:5,2:6:42.80:43,0,125	./.	./.	0/0:21,0:16:39.11:0,39,460	0/0:20,0:19:48.12:0,48,554	0/0:13,0:11:24.07:0,24,287	1/1:10,8:11:27.08:339,27,0	0/0:14,0:12:30.08:0,30,343	0/0:14,0:10:30.09:0,30,360	0/0:21,0:14:36.05:0,36,381	0/0:10,0:7:15.04:0,15,177	0/0:14,0:8:18.05:0,18,216	0/0:21,0:13:26.75:0,27,305	0/0:11,0:8:16.40:0,16,173	0/1:5,5:9:99:127,0,112	0/0:28,0:10:30.09:0,30,361	0/0:17,0:6:10.51:0,11,78	0/1:6,3:6:51.20:51,0,92	0/1:13,7:19:99:177,0,140	1/1:6,3:3:6.01:61,6,0	0/0:5,0:5:12.04:0,12,144	0/0:10,0:6:18.06:0,18,215	0/0:27,0:11:12.77:0,13,146	0/0:27,0:16:45.14:0,45,540	0/1:17,7:20:99:203,0,271	0/1:12,4:12:92.33:92,0,216	./.
chr10	100994487	.	AAAGAAAGG	A	452.02	PASS	AB=1.000;AC=6;AF=0.120;AN=50;BaseQRankSum=-2.054;DP=459;FS=5.109;HRun=0;HaplotypeScore=116.1813;InbreedingCoeff=0.1516;MQ=33.89;MQ0=157;MQRankSum=4.973;QD=5.20;ReadPosRankSum=-1.508;VQSLOD=1.9251;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:8:24.38:24,0,51	0/0:7,0:6:17.62:0,18,107	./.	./.	0/1:21,0:15:31.58:32,0,275	0/1:19,0:17:58.38:152,0,58	0/1:12,0:10:49.23:49,0,64	0/0:25,0:18:46.67:0,47,273	0/0:22,0:15:31.83:0,32,251	0/0:17,0:11:12.24:0,12,270	1/1:10,11:14:29.44:321,29,0	0/0:9,0:5:14.96:0,15,123	0/0:15,0:9:18.32:0,18,140	0/0:23,0:12:21.89:0,22,209	0/0:9,0:6:7.01:0,7,66	0/0:8,0:7:20.48:0,20,128	0/0:34,0:12:9.07:0,9,213	0/0:22,0:8:9.60:0,10,103	0/0:14,0:9:17.74:0,18,116	0/0:24,0:22:31.94:0,32,183	0/0:9,0:3:2.88:0,3,15	0/0:4,0:4:5.91:0,6,38	0/0:8,0:3:5.93:0,6,40	0/0:32,0:11:11.64:0,12,64	0/0:30,0:17:35.95:0,36,376	0/0:28,0:22:42.53:0,43,254	0/0:15,0:11:27.26:0,27,160	./.
chr10	100994524	.	AAG	A	188.32	PASS	AB=0.933;AC=8;AF=0.154;AN=52;BaseQRankSum=6.763;DP=493;FS=0.000;HRun=0;HaplotypeScore=97.2173;InbreedingCoeff=0.0940;MQ=31.08;MQ0=171;MQRankSum=-3.233;QD=1.79;ReadPosRankSum=-4.100;VQSLOD=0.7618;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:9:17.10:0,17,154	0/0:3,0:2:6.02:0,6,83	./.	./.	0/0:18,0:11:24.05:0,24,339	0/0:21,0:19:51.17:0,51,851	0/0:18,0:13:27.02:0,27,359	0/0:23,0:19:54.11:0,54,692	0/0:24,0:17:39.13:0,39,630	0/0:17,0:9:27.09:0,27,427	0/0:26,0:18:36.55:0,37,628	1/1:12,0:3:8.06:84,8,0	0/0:16,0:10:24.07:0,24,403	0/0:23,0:11:27.07:0,27,445	0/0:12,0:8:24.08:0,24,334	0/1:11,0:10:30.34:30,0,183	0/0:35,0:11:26.98:0,27,365	0/0:22,0:8:12.04:0,12,203	0/0:17,0:12:17.95:0,18,207	0/1:31,0:29:3.66:4,0,268	0/0:9,0:3:2.94:0,3,42	0/1:2,4:5:40.66:140,0,41	0/1:8,0:3:0.76:1,0,9	0/0:34,2:14:9.91:0,10,114	0/0:25,0:12:18.06:0,18,326	0/0:27,0:19:19.36:0,19,357	0/1:15,0:10:23.48:23,0,139	0/1:22,0:8:29.15:29,0,33
chr10	100994532	.	AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAG	A	7434.98	PASS	AB=0.900;AC=17;AF=0.327;AN=52;BaseQRankSum=6.773;DP=491;FS=3.053;HRun=0;HaplotypeScore=333.4459;InbreedingCoeff=0.6931;MQ=31.45;MQ0=170;MQRankSum=-5.353;QD=42.49;ReadPosRankSum=-0.952;VQSLOD=2.7875;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:8:20.09:0,20,733	1/1:4,0:3:8.89:198,9,0	./.	./.	0/0:19,0:12:27.09:0,27,1508	0/0:19,0:17:48.16:0,48,3253	0/0:16,0:11:25.90:0,26,1539	1/1:16,0:11:29.72:221,30,0	0/0:24,0:17:42.14:0,42,2941	0/0:14,0:6:18.06:0,18,1537	0/0:23,0:15:33.11:0,33,2779	0/0:12,0:3:9.03:0,9,266	0/0:14,0:8:21.07:0,21,1366	0/0:21,0:10:24.08:0,24,1821	0/1:13,0:9:41.32:41,0,640	1/1:13,0:12:35.79:1306,36,0	0/0:36,0:12:30.10:0,30,1567	0/0:22,0:9:18.06:0,18,1200	1/1:9,7:11:26.95:945,27,0	1/1:10,22:30:32.61:439,33,0	0/1:9,0:4:99:161,0,153	0/0:7,0:5:15.05:0,15,473	0/0:8,0:3:6.02:0,6,196	0/0:39,0:16:24.97:0,25,795	0/0:27,0:14:24.04:0,24,1930	0/1:16,12:20:99:1488,0,181	1/1:19,0:14:41.89:1733,42,0	1/1:25,0:11:17.99:902,18,0
chr10	100994576	.	AAG	A	4357.63	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=12.350;DP=480;FS=10.257;HRun=0;HaplotypeScore=104.7918;InbreedingCoeff=0.8433;MQ=55.71;MQ0=51;MQRankSum=-9.545;QD=18.95;ReadPosRankSum=2.269;VQSLOD=4.9002;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,8:12:25.97:316,26,0	1/1:6,0:5:15.05:188,15,0	0/0:7,0:7:0.49:0,0,221	0/0:16,0:13:10.86:0,11,229	0/0:21,0:18:31.60:0,32,589	0/0:23,0:21:54.18:0,54,851	0/0:21,0:19:45.15:0,45,665	1/1:14,0:8:24.08:299,24,0	0/0:18,0:13:30.10:0,30,474	0/0:22,0:20:45.62:0,46,685	0/0:22,0:21:54.17:0,54,832	1/1:15,0:4:12.04:150,12,0	0/0:14,0:14:30.97:0,31,445	0/0:16,0:11:27.02:0,27,402	1/1:12,0:7:21.07:261,21,0	1/1:14,0:13:39.12:486,39,0	0/0:27,0:19:42.14:0,42,637	0/0:20,0:15:30.10:0,30,457	1/1:10,0:7:20.98:242,21,0	1/1:24,0:23:11.96:115,12,0	1/1:10,0:8:15:159,15,0	1/1:8,0:6:15.05:190,15,0	1/1:12,0:8:21.07:263,21,0	1/1:29,0:16:1.80:151,2,0	0/0:23,0:21:42.13:0,42,622	0/1:19,0:14:56.33:306,0,56	1/1:23,0:22:66.21:823,66,0	1/1:19,0:16:33.10:409,33,0
chr10	100994579	.	AG	A	1143.79	PASS	AB=0.889;AC=19;AF=0.339;AN=56;BaseQRankSum=11.737;DP=475;FS=6.885;HRun=1;HaplotypeScore=111.4039;InbreedingCoeff=0.6970;MQ=58.03;MQ0=36;MQRankSum=-10.499;QD=6.97;ReadPosRankSum=4.049;VQSLOD=0.9017;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:12:6.37:28,0,6	1/1:0,5:5:14.43:78,14,0	0/0:8,0:8:23.94:0,24,332	0/0:17,0:14:31.20:0,31,365	0/0:18,0:18:29.09:0,29,654	0/0:23,0:21:54.18:0,54,863	0/0:19,0:17:45.15:0,45,717	1/1:4,9:8:23.34:137,23,0	0/0:17,0:13:30.10:0,30,479	0/0:22,0:20:57.06:0,57,842	0/0:23,0:22:57.18:0,57,888	0/0:15,0:5:2.71:0,3,5	0/0:15,0:15:36.10:0,36,540	0/0:15,0:11:30.10:0,30,462	1/1:3,10:8:8.40:104,8,0	1/1:2,12:13:37.68:211,38,0	0/0:25,0:18:47.64:0,48,715	0/0:21,0:17:38.84:0,39,533	1/1:10,0:7:16.98:98,17,0	1/1:23,1:23:4.79:30,5,0	0/1:5,5:8:8.13:42,0,8	0/0:8,0:6:2.36:0,2,4	0/0:14,0:10:7.38:0,7,36	0/0:28,0:16:13.19:0,13,66	0/0:23,0:21:45.15:0,45,710	0/1:17,0:14:63.81:110,0,64	1/1:2,22:23:65.80:347,66,0	1/1:6,10:18:16.91:155,17,0
chr10	100994581	.	AG	A	1145.03	PASS	AB=0.821;AC=18;AF=0.321;AN=56;BaseQRankSum=11.768;DP=469;FS=6.890;HRun=1;HaplotypeScore=112.8399;InbreedingCoeff=0.7656;MQ=60.12;MQ0=29;MQRankSum=-10.175;QD=7.79;ReadPosRankSum=4.356;VQSLOD=0.9997;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:13:6.88:0,7,38	1/1:0,5:5:14.43:78,14,0	0/0:9,0:9:23.94:0,24,333	0/0:17,0:14:32.79:0,33,406	0/0:18,0:18:42.61:0,43,672	0/0:24,0:22:57.18:0,57,887	0/0:18,0:17:45.15:0,45,716	1/1:4,9:9:23.81:139,24,0	0/0:16,0:14:33.10:0,33,503	0/0:21,0:19:57.18:0,57,860	0/0:23,0:22:60.20:0,60,939	0/0:16,0:6:5.70:0,6,28	0/0:14,0:14:36.12:0,36,556	0/0:15,0:11:30.10:0,30,474	1/1:3,10:8:10.61:106,11,0	1/1:2,12:13:37.68:212,38,0	0/0:25,0:18:47.28:0,47,714	0/0:21,0:17:37.01:0,37,555	1/1:9,0:7:17.12:99,17,0	1/1:23,1:23:4.79:30,5,0	0/1:4,5:8:5.78:42,0,6	0/0:8,0:6:2.36:0,2,4	0/0:15,0:11:13.14:0,13,87	0/0:26,0:16:15.78:0,16,115	0/0:21,0:19:48.16:0,48,747	0/1:16,0:14:63.81:110,0,64	1/1:3,22:24:66.69:350,67,0	1/1:9,10:18:22.09:178,22,0
chr10	100996077	.	T	TC	9078.07	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-15.022;DP=735;FS=7.309;HRun=1;HaplotypeScore=70.8130;InbreedingCoeff=0.9991;MQ=87.43;MQ0=0;MQRankSum=-3.888;QD=40.71;ReadPosRankSum=-1.365;VQSLOD=4.7219;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,1890	1/1:1,7:8:21.07:314,21,0	0/0:22,0:22:57.16:0,57,693	0/0:29,0:29:65.33:0,65,800	0/0:29,0:29:87.28:0,87,1127	0/0:23,0:23:69.22:0,69,895	0/0:25,0:25:75.23:0,75,957	1/1:2,26:28:75.23:1082,75,0	0/0:23,0:23:69.22:0,69,895	0/0:20,0:20:57.15:0,57,712	0/0:23,0:23:69.22:0,69,894	0/0:40,0:40:99:0,111,1420	0/0:30,0:30:90.29:0,90,1165	0/0:28,0:28:81.26:0,81,1048	0/0:30,0:30:84.27:0,84,1090	1/1:2,22:24:27.30:905,27,0	0/0:37,0:37:99:0,108,1382	0/0:22,0:22:66.18:0,66,838	1/1:0,29:29:87.17:1230,87,0	1/1:1,28:29:78.26:1167,78,0	1/1:0,39:39:99:1618,108,0	0/0:19,0:19:54.16:0,54,683	0/0:16,0:16:48.16:0,48,620	0/0:36,0:36:99:0,105,1318	0/0:10,0:10:30.10:0,30,389	1/1:1,28:29:84.27:1236,84,0	1/1:1,23:24:66.22:987,66,0	1/1:0,13:13:36.12:539,36,0
chr10	100996367	.	A	ATATCTC	4029.48	PASS	AB=0.929;AC=18;AF=0.321;AN=56;BaseQRankSum=10.482;DP=566;FS=19.080;HRun=0;HaplotypeScore=168.6126;InbreedingCoeff=0.1330;MQ=61.72;MQ0=11;MQRankSum=-10.028;QD=15.26;ReadPosRankSum=-5.866;VQSLOD=0.0856;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:24:14.89:175,15,0	0/1:11,0:12:52:52,0,83	0/0:32,0:15:35.67:0,36,689	0/0:32,0:14:32.10:0,32,570	0/0:20,0:20:57.16:0,57,1200	0/0:25,0:25:65.42:0,65,1422	0/0:19,0:19:31.25:0,31,1173	0/1:36,0:35:99:392,0,414	0/0:17,0:17:45.15:0,45,1050	0/0:18,0:18:48.16:0,48,1103	0/0:14,0:14:42.14:0,42,936	0/1:10,0:10:99:119,0,198	0/0:33,0:33:96.30:0,96,2130	0/0:18,0:18:54.15:0,54,1140	1/1:1,13:15:15.05:523,15,0	0/1:18,0:19:99:182,0,103	0/0:21,0:21:60.19:0,60,1337	0/0:22,0:22:60.21:0,60,1382	1/1:8,0:16:44.63:588,45,0	0/1:16,0:28:58.93:122,0,59	1/1:8,0:8:2.40:16,2,0	0/1:7,0:7:33.64:34,0,252	0/1:17,0:17:99:237,0,353	0/0:9,0:9:14.37:0,14,308	0/0:22,0:21:60.17:0,60,1249	0/1:33,0:33:99:622,0,361	0/1:18,0:24:99:523,0,120	0/1:12,0:12:57.74:443,0,58
chr10	100996371	.	A	ATCTCTCTC	6212.55	PASS	AB=1.000;AC=29;AF=0.537;AN=54;BaseQRankSum=6.704;DP=587;FS=9.048;HRun=0;HaplotypeScore=182.1012;InbreedingCoeff=0.7113;MQ=59.43;MQ0=13;MQRankSum=-9.580;QD=18.06;ReadPosRankSum=-4.765;VQSLOD=2.1289;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:4.16:122,4,0	1/1:12,0:12:3.01:104,3,0	0/1:34,0:15:6.15:6,0,50	0/1:29,0:11:0:0,0,0	0/0:19,0:23:22.37:0,22,706	0/0:19,0:23:45:0,45,912	0/0:17,0:21:30.60:0,31,827	1/1:38,0:37:36.08:748,36,0	0/0:15,0:17:26.98:0,27,727	0/0:19,0:19:20.96:0,21,369	0/0:15,0:15:7.08:0,7,334	1/1:5,6:16:12.02:335,12,0	0/0:30,0:32:69.18:0,69,1513	0/0:15,0:16:21.07:0,21,503	1/1:11,0:11:18.05:410,18,0	1/1:18,0:18:9.03:280,9,0	0/0:22,0:23:18.41:0,18,725	0/0:20,0:22:33.09:0,33,762	1/1:18,0:17:23.29:570,23,0	1/1:28,0:27:11.55:276,12,0	./.	1/1:5,2:13:3.01:123,3,0	1/1:7,7:20:20.20:677,20,0	1/1:9,0:9:2.99:24,3,0	0/0:19,0:21:36.12:0,36,774	0/1:33,0:33:26.32:997,0,26	1/1:24,0:24:27.09:768,27,0	1/1:16,0:15:30.04:772,30,0
chr10	100997395	.	CATATATATATATAT	C	7426.34	PASS	AB=0.617;AC=24;AF=0.462;AN=52;BaseQRankSum=6.608;DP=349;FS=5.645;HRun=0;HaplotypeScore=136.2247;InbreedingCoeff=0.5467;MQ=60.01;MQ0=3;MQRankSum=-5.401;QD=34.07;ReadPosRankSum=0.159;VQSLOD=4.0581;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:9:16.32:16,0,61	1/1:1,5:6:15.05:444,15,0	0/0:10,0:2:2.92:0,3,17	0/0:19,0:7:7.52:0,8,54	0/0:11,0:12:21.06:0,21,930	0/0:4,0:5:9.03:0,9,397	./.	1/1:23,24:46:72.08:1288,72,0	./.	0/0:8,0:8:15.05:0,15,808	0/0:7,0:8:15.04:0,15,756	0/0:2,0:2:3.01:0,3,39	0/0:6,0:6:9.03:0,9,615	0/0:3,0:4:3.01:0,3,185	1/1:3,0:14:21.85:310,22,0	1/1:7,11:18:12.04:454,12,0	0/0:13,0:21:36.12:0,36,1753	0/0:10,0:18:33.11:0,33,1665	1/1:7,18:25:54.04:1406,54,0	1/1:2,17:19:33.11:1047,33,0	1/1:8,0:8:9.02:182,9,0	1/1:7,0:7:0.47:1,0,0	0/1:4,0:7:22.35:22,0,38	1/1:2,0:3:2.22:7,2,0	0/0:8,0:8:20.10:0,20,1047	0/1:4,0:16:10.61:533,0,11	1/1:2,22:23:39.13:1407,39,0	0/1:3,0:15:2.63:309,0,3
chr10	100997889	.	GA	G	380.75	PASS	AB=0.871;AC=7;AF=0.125;AN=56;BaseQRankSum=10.212;DP=641;FS=8.201;HRun=12;HaplotypeScore=72.0071;InbreedingCoeff=0.7590;MQ=75.70;MQ0=1;MQRankSum=-4.279;QD=4.38;ReadPosRankSum=3.486;VQSLOD=0.9078;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:32:58.12:181,58,0	0/0:10,1:11:6.81:0,7,246	0/0:21,0:19:18.78:0,19,148	0/0:16,0:15:22.14:0,22,180	0/0:25,2:28:19.48:0,19,537	0/0:23,1:24:45.90:0,46,646	0/0:16,0:17:44.92:0,45,441	0/0:37,0:37:73.29:0,73,690	0/0:27,0:27:40.02:0,40,573	0/0:22,0:22:54.10:0,54,545	0/0:17,1:18:15.82:0,16,330	0/0:16,0:18:44.92:0,45,440	0/0:20,3:23:7.61:0,8,426	0/0:15,1:16:12.81:0,13,303	1/1:1,0:12:16.29:47,16,0	0/0:25,0:25:60.08:0,60,586	0/1:23,4:27:20.82:21,0,529	0/0:16,0:16:39.08:0,39,396	0/0:28,0:29:62.92:0,63,612	0/0:36,1:38:77.72:0,78,755	0/0:12,0:13:32.89:0,33,313	0/0:22,1:23:10.87:0,11,444	0/0:22,1:23:26.10:0,26,436	0/0:14,1:15:12.81:0,13,299	1/1:3,12:15:35.84:279,36,0	0/0:36,1:39:51.58:0,52,675	0/0:35,1:37:39.04:0,39,604	0/0:17,0:18:50.90:0,51,487
chr10	100998311	.	AAAT	A	1208.44	PASS	AB=0.889;AC=5;AF=0.089;AN=56;BaseQRankSum=7.691;DP=455;FS=1.454;HRun=0;HaplotypeScore=63.0785;InbreedingCoeff=0.6875;MQ=75.75;MQ0=0;MQRankSum=-0.976;QD=23.69;ReadPosRankSum=2.967;VQSLOD=3.6567;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,12:16:30.10:427,30,0	0/0:6,0:6:15.05:0,15,297	0/0:11,0:11:12.04:0,12,187	0/0:17,0:17:27.08:0,27,449	0/0:23,0:23:51.17:0,51,1012	0/0:16,0:16:42.14:0,42,844	0/1:7,1:8:22.33:22,0,347	0/0:26,0:26:57.19:0,57,1094	0/0:14,0:14:30.10:0,30,614	0/0:26,0:26:54.19:0,54,1078	0/0:27,0:27:69.20:0,69,1335	0/0:14,0:14:36.12:0,36,737	0/0:13,0:13:27.09:0,27,538	0/0:13,0:13:30.10:0,30,598	1/1:5,22:27:63.17:888,63,0	0/0:16,0:16:45.15:0,45,911	0/0:18,2:20:1.76:0,2,816	0/0:19,0:19:39.61:0,40,786	0/0:13,0:13:33.10:0,33,627	0/0:21,0:21:51.17:0,51,1011	0/0:11,0:11:24.08:0,24,491	0/0:10,0:10:15.05:0,15,307	0/0:9,0:9:18.06:0,18,368	0/0:9,0:9:24.08:0,24,491	0/0:16,0:16:39.13:0,39,798	0/0:18,0:18:45.15:0,45,874	0/0:23,2:25:16.81:0,17,1095	0/0:11,0:11:30.10:0,30,597
chr10	101000084	.	TTCTCTCTCTCTC	T	197.31	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=2.685;DP=414;FS=8.415;HRun=0;HaplotypeScore=127.7188;InbreedingCoeff=0.5378;MQ=78.32;MQ0=14;MQRankSum=-1.178;QD=6.17;ReadPosRankSum=0.915;VQSLOD=1.3245;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,5:18:1.69:0,2,5	0/0:4,0:4:3.01:0,3,64	0/0:25,0:20:2.84:0,3,47	./.	0/0:24,0:24:15.05:0,15,601	0/0:24,0:22:24.03:0,24,961	0/0:7,0:7:5.87:0,6,232	0/0:21,0:21:4.26:0,4,40	0/0:12,0:12:11.74:0,12,690	0/0:21,0:21:24.97:0,25,471	0/0:12,0:11:6.02:0,6,140	1/1:9,0:8:14.74:220,15,0	0/0:17,0:17:24.08:0,24,991	0/0:8,0:8:18.06:0,18,869	0/0:12,0:12:9.03:0,9,375	0/0:4,0:6:9.03:0,9,109	0/0:12,0:16:18.06:0,18,600	0/0:18,0:18:21.07:0,21,1106	0/0:21,0:20:13.29:0,13,214	0/0:13,0:14:9.03:0,9,170	0/0:7,0:7:3.01:0,3,37	1/1:6,4:10:5.91:69,6,0	1/1:13,0:12:2.99:24,3,0	./.	0/0:13,0:12:12.02:0,12,288	0/0:18,0:18:16.87:0,17,363	0/0:14,0:14:21.06:0,21,388	0/0:16,0:13:12.51:0,13,227
chr10	101000142	.	T	TTTAA	3899.72	PASS	AB=0.750;AC=15;AF=0.278;AN=54;BaseQRankSum=-4.956;DP=332;FS=4.837;HRun=0;HaplotypeScore=70.8804;InbreedingCoeff=0.7236;MQ=60.86;MQ0=9;MQRankSum=0.736;QD=33.62;ReadPosRankSum=-1.417;VQSLOD=3.0876;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:38.96:0,39,579	1/1:5,0:5:6.02:106,6,0	0/0:12,0:3:0:0,0,0	0/0:17,0:4:2.97:0,3,20	0/0:11,0:11:18.06:0,18,284	0/0:13,0:13:27.08:0,27,407	0/0:6,0:6:6.02:0,6,98	1/1:25,13:40:57.67:1226,58,0	0/0:10,0:10:15.05:0,15,241	0/0:8,0:8:21.07:0,21,335	0/0:12,0:11:18.06:0,18,289	0/0:9,0:9:11.96:0,12,196	0/0:14,0:14:33.09:0,33,489	0/0:12,0:12:30.10:0,30,490	0/0:13,0:13:27.08:0,27,413	1/1:4,5:8:12.04:292,12,0	0/0:22,0:22:48.12:0,48,732	0/0:17,0:17:30.10:0,30,490	1/1:6,9:16:30.08:681,30,0	1/1:4,1:5:9.03:185,9,0	1/1:2,0:2:6.02:145,6,0	0/0:4,0:4:3.01:0,3,49	0/0:6,0:6:18.05:0,18,270	0/0:5,0:5:5.81:0,6,97	0/0:8,0:8:12.04:0,12,196	0/1:10,5:15:99:336,0,119	1/1:8,13:24:39.13:930,39,0	./.
chr10	101000538	.	AT	A	3897.24	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=9.655;DP=611;FS=3.011;HRun=10;HaplotypeScore=65.8269;InbreedingCoeff=0.9901;MQ=71.75;MQ0=0;MQRankSum=-0.113;QD=20.40;ReadPosRankSum=-0.451;VQSLOD=4.4335;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.22:0,84,921	1/1:0,10:10:26.99:234,27,0	0/0:11,0:11:21.06:0,21,230	0/0:11,0:11:13.90:0,14,110	0/0:22,0:22:57.14:0,57,621	0/0:27,0:27:72.18:0,72,787	0/0:17,1:18:22.06:0,22,464	1/1:7,24:31:68.93:591,69,0	0/0:34,1:35:67.20:0,67,970	0/0:21,0:21:48.12:0,48,525	0/0:29,0:29:72.19:0,72,788	0/0:21,0:22:62.99:0,63,670	0/0:19,0:19:54.13:0,54,589	0/0:18,0:18:45.07:0,45,471	0/0:2,0:35:82.38:0,82,411	1/1:5,24:30:40.84:572,41,0	0/0:21,0:21:57.15:0,57,630	0/0:23,0:24:66:0,66,704	1/1:4,18:22:53.98:469,54,0	1/1:2,19:21:47.97:417,48,0	1/1:1,5:6:14.99:130,15,0	0/0:22,0:22:57.15:0,57,631	0/0:19,0:19:42.11:0,42,464	0/0:25,0:25:66.18:0,66,730	0/0:9,0:9:24.06:0,24,265	1/1:3,23:26:68.98:599,69,0	1/1:4,34:38:86.97:755,87,0	1/1:2,5:7:14.99:130,15,0
chr10	101002221	.	C	CT	1431.04	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-10.247;DP=589;FS=5.563;HRun=8;HaplotypeScore=56.1850;InbreedingCoeff=0.8442;MQ=66.57;MQ0=2;MQRankSum=0.524;QD=19.60;ReadPosRankSum=1.783;VQSLOD=3.6546;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,28:37:68.29:825,68,0	0/0:7,0:7:15.01:0,15,137	0/0:10,0:8:15:0,15,134	0/1:11,0:9:0.25:0,0,46	0/0:26,0:26:69.04:0,69,631	0/0:23,0:23:22.42:0,22,446	0/0:19,0:19:56.98:0,57,505	0/0:34,0:34:78.01:0,78,706	0/0:20,0:20:47.98:0,48,430	0/0:23,0:23:66:0,66,594	0/0:22,0:22:51.01:0,51,462	0/0:27,0:27:68.94:0,69,613	0/0:19,0:19:51.01:0,51,461	0/0:31,1:32:49.21:0,49,695	1/1:1,24:25:63.19:727,63,0	0/0:15,0:15:45.02:0,45,408	0/0:23,0:23:63.01:0,63,571	0/0:25,0:25:65.93:0,66,582	0/0:12,0:12:32.99:0,33,295	0/0:18,0:18:47.99:0,48,429	0/0:13,0:13:39.01:0,39,353	0/0:21,0:21:53.99:0,54,488	0/0:23,1:24:31.38:0,31,530	0/0:25,0:25:57.03:0,57,522	0/0:21,0:21:54.02:0,54,491	0/0:28,0:28:72.03:0,72,659	0/0:14,0:14:35.99:0,36,320	0/0:14,1:15:10.41:0,10,350
chr10	101002801	.	A	ATTTT	1051.13	PASS	AB=0.587;AC=6;AF=0.107;AN=56;BaseQRankSum=1.296;DP=599;FS=1.883;HRun=11;HaplotypeScore=113.0244;InbreedingCoeff=0.5188;MQ=73.93;MQ0=0;MQRankSum=-1.051;QD=10.21;ReadPosRankSum=-0.883;VQSLOD=0.3934;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:40:32.52:392,33,0	0/1:2,0:13:19.25:19,0,49	0/0:14,0:14:20.80:0,21,250	0/0:13,0:13:0.09:0,0,95	0/0:26,0:27:53.90:0,54,701	0/0:27,0:27:72.16:0,72,981	0/0:19,0:23:57.06:0,57,723	0/0:9,0:28:23.78:0,24,132	0/0:16,0:17:32.93:0,33,432	0/0:25,0:25:66.19:0,66,897	0/0:13,0:14:34.33:0,34,453	0/0:18,0:18:29.88:0,30,409	0/0:22,0:23:27.78:0,28,553	0/0:19,0:21:60.10:0,60,767	1/1:8,13:26:39.05:753,39,0	0/0:5,0:20:20.30:0,20,85	0/0:23,0:23:54.03:0,54,719	0/0:10,0:13:31.25:0,31,360	0/1:10,0:24:21:21,0,57	0/0:7,0:27:11.14:0,11,81	0/0:3,0:16:18.46:0,18,114	0/0:17,0:17:45.14:0,45,614	0/0:20,0:24:58.33:0,58,729	0/0:29,0:29:56.60:0,57,773	0/0:18,0:18:42.01:0,42,553	0/0:4,0:23:4.48:0,4,73	0/0:4,0:25:20.28:0,20,54	0/0:4,0:9:12.14:0,12,96
chr10	101005127	.	GA	G	262.88	PASS	AB=0.889;AC=3;AF=0.054;AN=56;BaseQRankSum=4.576;DP=456;FS=5.217;HRun=9;HaplotypeScore=45.4255;InbreedingCoeff=0.6775;MQ=71.28;MQ0=2;MQRankSum=0.517;QD=11.43;ReadPosRankSum=1.115;VQSLOD=2.2344;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39.10:0,39,438	0/0:3,0:4:11.87:0,12,118	0/0:18,0:10:9.96:0,10,119	0/0:19,0:11:20.88:0,21,177	0/0:17,0:17:48.14:0,48,553	0/0:17,0:17:48.04:0,48,535	0/0:13,0:13:33.08:0,33,371	0/0:27,0:27:63.19:0,63,726	0/0:13,0:13:39.12:0,39,450	0/0:12,0:12:33.10:0,33,380	0/0:20,0:20:60.18:0,60,693	0/0:8,0:8:24.07:0,24,277	0/0:17,0:17:45.13:0,45,519	0/0:9,0:9:24.07:0,24,277	1/1:1,14:15:39.02:357,39,0	0/0:7,0:7:18.05:0,18,208	0/0:19,0:21:53.82:0,54,583	0/0:18,0:18:48.14:0,48,553	0/0:16,0:16:36.11:0,36,416	0/0:32,0:32:84.21:0,84,934	0/0:8,0:8:21.06:0,21,242	0/0:13,0:13:27.04:0,27,297	0/0:16,0:16:48.14:0,48,554	0/1:7,1:8:3.39:3,0,218	0/0:25,0:25:66.20:0,66,762	0/0:24,0:24:66.20:0,66,761	0/0:27,0:27:75.22:0,75,865	0/0:18,0:18:48.10:0,48,532
chr10	101005917	.	T	TA	935.60	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.572;DP=671;FS=0.614;HRun=9;HaplotypeScore=62.9883;InbreedingCoeff=0.9983;MQ=75.28;MQ0=1;MQRankSum=-1.643;QD=18.71;ReadPosRankSum=-0.921;VQSLOD=3.4757;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:33:84.06:910,84,0	0/0:18,0:18:41.98:0,42,365	0/0:17,0:17:35.95:0,36,310	0/0:16,0:15:26.98:0,27,234	0/0:41,0:41:99:0,108,937	0/0:33,0:34:92.02:0,92,787	0/0:16,0:16:32.97:0,33,286	0/0:24,0:24:62.95:0,63,544	0/0:22,0:22:50.99:0,51,443	0/0:23,0:23:62.98:0,63,544	0/0:25,0:25:53.97:0,54,468	0/0:24,0:24:68.98:0,69,599	0/0:24,0:24:62.95:0,63,539	0/0:23,0:23:65.99:0,66,573	1/1:1,2:16:25.73:147,26,0	0/0:33,0:34:91.98:0,92,779	0/0:24,0:24:68.98:0,69,599	0/0:30,0:30:77.97:0,78,677	0/0:28,0:28:68.97:0,69,599	0/0:32,0:32:89.94:0,90,774	0/0:15,0:15:38.99:0,39,338	0/0:22,0:22:56.97:0,57,495	0/0:19,0:19:56.99:0,57,494	0/0:27,0:27:68.97:0,69,599	0/0:18,0:18:50.98:0,51,440	0/0:27,0:27:71.98:0,72,625	0/0:26,1:27:41.87:0,42,588	0/0:11,0:11:32.99:0,33,287
chr10	101011126	.	CT	C	283.25	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.217;DP=345;FS=5.392;HRun=1;HaplotypeScore=36.3111;InbreedingCoeff=0.8549;MQ=55.35;MQ0=4;MQRankSum=2.246;QD=25.75;ReadPosRankSum=2.643;VQSLOD=3.4382;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:51.17:0,51,815	0/0:5,0:5:15.05:0,15,237	0/0:10,1:4:12:0,12,163	0/0:17,1:11:30.07:0,30,436	0/0:16,0:16:45.15:0,45,716	0/0:13,0:13:39.13:0,39,624	0/0:19,0:19:57.19:0,57,911	0/0:16,0:16:45.15:0,45,720	0/0:14,0:14:39.13:0,39,623	0/0:15,0:15:45.15:0,45,720	0/0:14,0:14:39.13:0,39,622	0/0:7,0:7:21.07:0,21,336	0/0:6,0:6:12.04:0,12,191	0/0:11,0:11:33.08:0,33,501	1/1:0,11:10:27.09:377,27,0	0/0:8,0:8:24.08:0,24,384	0/0:22,0:22:63.18:0,63,980	0/0:17,1:17:51.17:0,51,815	0/0:14,0:13:39.13:0,39,623	0/0:17,0:17:51.17:0,51,812	0/0:8,0:8:21.07:0,21,334	0/0:5,0:4:12.04:0,12,191	0/0:5,0:5:15.04:0,15,207	0/0:5,0:5:15.05:0,15,240	0/0:12,0:12:33.11:0,33,527	0/0:16,0:16:48.16:0,48,768	0/0:14,0:14:39.13:0,39,623	0/0:6,0:5:15.05:0,15,240
chr10	101011581	.	CT	C	2206.55	PASS	AB=0.799;AC=28;AF=0.500;AN=56;BaseQRankSum=9.450;DP=521;FS=5.897;HRun=16;HaplotypeScore=73.3930;InbreedingCoeff=0.6068;MQ=64.58;MQ0=3;MQRankSum=-1.568;QD=7.45;ReadPosRankSum=5.484;VQSLOD=2.8441;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,3:40:23.69:0,24,382	1/1:0,9:9:26.48:161,26,0	0/0:27,0:15:2.98:0,3,22	0/0:15,0:13:3.22:0,3,69	0/0:21,1:26:27.44:0,27,291	0/1:11,3:15:33.95:34,0,88	0/0:18,0:18:29.76:0,30,223	1/1:15,27:42:76.60:475,77,0	0/1:14,2:15:18.09:18,0,71	0/0:16,0:16:23.95:0,24,196	0/0:9,1:11:14.83:0,15,115	1/1:8,11:19:8.63:54,9,0	0/0:13,0:13:20.76:0,21,142	0/0:7,0:7:11.88:0,12,90	0/0:5,0:16:5.80:0,6,33	1/1:2,18:20:52.85:320,53,0	0/1:22,3:25:7.19:7,0,221	0/0:20,1:21:4.30:0,4,103	1/1:9,17:26:49.67:301,50,0	1/1:2,14:16:29.29:179,29,0	1/1:9,6:15:14.29:89,14,0	1/1:6,8:15:16.67:106,17,0	0/1:6,9:14:11.18:57,0,11	1/1:13,4:18:12.73:67,13,0	0/0:13,2:15:5.96:0,6,155	1/1:10,11:21:32.09:196,32,0	1/1:3,15:18:46.15:275,46,0	1/1:0,5:5:11.77:72,12,0
chr10	101013747	.	T	TA	6264.34	PASS	AB=0.795;AC=28;AF=0.500;AN=56;BaseQRankSum=-12.738;DP=533;FS=3.553;HRun=8;HaplotypeScore=53.4258;InbreedingCoeff=0.8338;MQ=68.08;MQ0=0;MQRankSum=2.909;QD=24.57;ReadPosRankSum=-2.665;VQSLOD=4.6053;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:38.92:0,39,345	1/1:0,9:9:21.06:242,21,0	0/0:12,0:10:4.48:0,4,113	0/1:15,0:9:6.43:6,0,88	0/0:35,0:35:93.05:0,93,851	0/0:23,0:23:63.02:0,63,573	0/0:13,0:13:36.02:0,36,329	1/1:7,22:29:65.97:699,66,0	1/1:2,13:15:40.36:449,40,0	0/0:32,0:32:84.04:0,84,769	0/0:26,0:26:75.02:0,75,682	1/1:4,11:15:21.06:242,21,0	0/0:22,0:22:57.02:0,57,518	0/0:20,0:20:54.03:0,54,494	0/0:2,0:18:26.48:0,26,78	1/1:1,18:19:45.13:519,45,0	0/0:23,0:23:59.96:0,60,533	0/0:18,0:18:47.96:0,48,429	1/1:6,22:28:69.13:762,69,0	1/1:3,26:29:78:835,78,0	1/1:0,6:6:18.05:208,18,0	1/1:0,9:9:26.93:277,27,0	1/1:5,12:17:33.10:380,33,0	1/1:0,2:2:6.02:69,6,0	0/0:22,0:22:60.01:0,60,544	0/1:7,16:23:25.25:468,0,25	1/1:4,27:31:78.23:900,78,0	1/1:0,7:7:18.05:208,18,0
chr10	101013917	.	A	AT	8357.82	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-13.767;DP=590;FS=1.017;HRun=7;HaplotypeScore=54.5706;InbreedingCoeff=0.9912;MQ=79.69;MQ0=0;MQRankSum=-2.691;QD=30.50;ReadPosRankSum=-0.983;VQSLOD=4.6972;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.10:0,63,608	1/1:0,5:5:11.99:129,12,0	0/0:20,0:20:50.42:0,50,460	0/0:18,0:18:31.37:0,31,356	0/0:37,0:37:99:0,105,1006	0/0:22,0:22:57.08:0,57,546	0/0:16,0:16:39.06:0,39,377	1/1:8,26:34:78.19:897,78,0	1/1:2,26:28:75.19:889,75,0	0/0:28,0:28:84.12:0,84,805	0/0:25,0:25:66.02:0,66,621	1/1:1,12:13:36.11:435,36,0	0/0:29,0:29:72.08:0,72,690	0/0:22,0:22:63.07:0,63,597	0/0:20,0:20:54.08:0,54,522	1/1:0,18:18:51.16:616,51,0	0/0:27,0:27:75.11:0,75,720	0/0:13,0:13:33.02:0,33,318	1/1:4,21:25:37.21:721,37,0	1/1:1,26:27:75.15:873,75,0	1/1:1,17:18:48.15:580,48,0	1/1:4,10:15:32.97:377,33,0	1/1:1,12:13:36.11:435,36,0	1/1:1,12:13:33.10:399,33,0	0/0:17,0:18:53.11:0,53,494	1/1:4,27:31:29.31:921,29,0	1/1:3,24:29:78.24:941,78,0	1/1:1,4:5:12.04:145,12,0
chr10	101014454	.	A	AAACCC	3015.18	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.519;DP=647;FS=14.349;HRun=0;HaplotypeScore=159.5231;InbreedingCoeff=0.9707;MQ=82.77;MQ0=0;MQRankSum=-9.811;QD=70.12;ReadPosRankSum=-2.226;VQSLOD=3.7461;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,11:24:54.18:1616,54,0	0/0:12,0:12:33.11:0,33,693	0/0:19,0:19:48.15:0,48,952	0/0:19,0:19:47.97:0,48,817	0/0:29,0:29:81.28:0,81,1701	0/0:22,0:22:66.23:0,66,1386	0/0:29,0:29:84.29:0,84,1763	0/0:33,0:33:84.28:0,84,1728	0/0:19,0:19:57.20:0,57,1196	0/0:22,0:22:54.19:0,54,1134	0/0:18,0:18:51.17:0,51,1036	0/0:23,0:23:69.24:0,69,1448	0/0:32,0:32:84.29:0,84,1763	0/0:31,0:31:90.28:0,90,1796	1/1:3,15:19:51.17:1520,51,0	0/0:24,0:24:63.22:0,63,1323	0/0:25,0:25:72.25:0,72,1489	0/0:21,0:21:60.21:0,60,1255	0/0:23,0:23:54.18:0,54,1133	0/0:20,0:20:54.18:0,54,1134	0/0:29,0:29:81.23:0,81,1590	0/0:21,0:21:54.19:0,54,1120	0/0:22,0:22:63.20:0,63,1267	0/0:21,0:21:57.20:0,57,1197	0/0:24,0:24:63.22:0,63,1323	0/0:34,0:34:90.31:0,90,1890	0/0:28,0:28:81.28:0,81,1701	0/0:4,0:4:9.03:0,9,189
chr10	101014997	.	C	CA	15236.71	PASS	AB=0.519;AC=31;AF=0.554;AN=56;BaseQRankSum=17.770;DP=663;FS=16.429;HRun=0;HaplotypeScore=128.7918;InbreedingCoeff=0.9549;MQ=81.68;MQ0=0;MQRankSum=-2.565;QD=39.27;ReadPosRankSum=-0.318;VQSLOD=2.7713;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,41:42:99:1664,111,0	1/1:2,13:15:32.94:468,33,0	0/0:26,0:26:56.45:0,56,716	0/0:15,0:15:39.08:0,39,464	0/0:26,0:26:75.25:0,75,1046	0/0:28,0:28:84.27:0,84,1152	0/0:18,0:18:54.15:0,54,733	1/1:2,33:34:99:1402,99,0	1/1:0,24:24:57.19:858,57,0	0/0:21,0:21:60.13:0,60,795	0/0:17,0:17:51.13:0,51,686	1/1:3,20:23:60.03:865,60,0	0/0:24,0:24:72.24:0,72,996	0/0:13,0:13:36.12:0,36,502	1/1:0,32:32:84.17:1238,84,0	1/1:0,18:18:48.16:747,48,0	0/0:29,0:29:84.10:0,84,1122	0/0:32,0:32:96.22:0,96,1276	1/1:2,26:28:81.14:1092,81,0	1/1:1,31:32:90.11:1333,90,0	1/1:1,19:20:48.16:762,48,0	1/1:0,19:19:48.15:725,48,0	1/1:1,15:16:42.14:643,42,0	1/1:1,16:17:42.14:648,42,0	0/0:26,0:26:78.16:0,78,1023	0/1:2,25:27:2.15:1036,0,2	1/1:0,25:25:66.22:1043,66,0	1/1:0,15:15:45.15:715,45,0
chr10	101015145	.	GC	G	1883.08	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.068;DP=564;FS=0.548;HRun=3;HaplotypeScore=71.4608;InbreedingCoeff=0.9885;MQ=58.42;MQ0=2;MQRankSum=1.565;QD=34.24;ReadPosRankSum=0.850;VQSLOD=4.1630;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:99:1298,105,0	0/0:12,0:12:30.10:0,30,431	0/0:17,1:9:27.09:0,27,375	0/0:19,0:15:20.43:0,20,559	0/0:27,0:27:81.27:0,81,1165	0/0:22,0:21:66.22:0,66,950	0/0:21,0:21:60.20:0,60,863	0/0:18,0:17:45.15:0,45,640	0/0:18,0:18:54.16:0,54,757	0/0:32,0:32:93.31:0,93,1339	0/0:20,0:20:57.19:0,57,819	0/0:23,0:23:69.19:0,69,969	0/0:24,0:24:66.22:0,66,949	0/0:19,0:19:54.17:0,54,759	1/1:0,19:19:57.18:706,57,0	0/0:17,0:17:51.17:0,51,734	0/0:22,0:22:66.21:0,66,930	0/0:21,0:20:60.16:0,60,806	0/0:15,0:15:42.13:0,42,588	0/0:19,0:19:48.63:0,49,685	0/0:20,0:20:57.17:0,57,800	0/0:24,0:24:69.21:0,69,970	0/0:12,0:12:36.12:0,36,518	0/0:17,0:17:45.15:0,45,647	0/0:21,0:21:63.20:0,63,885	0/0:32,0:32:90.30:0,90,1280	0/0:11,0:11:33.08:0,33,453	0/0:5,0:5:15.05:0,15,216
chr10	101015740	.	G	GACTGATT	4668.28	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.031;DP=681;FS=1.235;HRun=0;HaplotypeScore=159.7199;InbreedingCoeff=0.9161;MQ=89.34;MQ0=0;MQRankSum=-10.292;QD=95.27;ReadPosRankSum=0.769;VQSLOD=6.0279;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,11:14:36.12:1304,36,0	0/0:10,0:10:30.10:0,30,779	0/0:28,0:28:74.40:0,74,1766	0/0:26,0:26:60.20:0,60,1326	0/0:28,0:28:84.27:0,84,2111	0/0:24,0:24:72.25:0,72,1816	0/0:25,0:25:75.26:0,75,1948	0/0:47,0:47:99:0,129,3123	0/0:25,0:25:66.18:0,66,1529	0/0:30,0:30:90.31:0,90,2284	0/0:27,0:26:72.25:0,72,1835	0/0:32,0:32:93.29:0,93,2269	0/0:28,0:28:78.25:0,78,1962	0/0:21,0:21:63.19:0,63,1510	1/1:6,27:35:87.26:3365,87,0	0/0:32,0:32:90.28:0,90,2204	0/0:21,0:21:60.18:0,60,1478	0/0:26,0:26:75.26:0,75,1948	0/0:20,0:20:54.19:0,54,1364	0/0:26,0:26:75.23:0,75,1792	0/0:26,0:26:69.20:0,69,1644	0/0:30,0:30:90.31:0,90,2260	0/0:27,0:27:81.26:0,81,2024	0/0:11,0:11:30.10:0,30,769	0/0:16,0:16:48.16:0,48,1242	0/0:17,0:17:51.18:0,51,1316	0/0:28,0:28:81.23:0,81,1914	0/0:1,0:1:3.01:0,3,78
chr10	101015999	.	C	CAG	1310.21	PASS	AB=0.500;AC=3;AF=0.054;AN=56;BaseQRankSum=4.723;DP=661;FS=6.750;HRun=0;HaplotypeScore=86.1683;InbreedingCoeff=0.6463;MQ=84.74;MQ0=0;MQRankSum=-7.741;QD=39.70;ReadPosRankSum=1.571;VQSLOD=5.6259;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:0,14:14:15.34:627,0,15	0/0:10,0:10:30.10:0,30,482	0/0:25,0:25:68.98:0,69,969	0/0:16,0:16:48.09:0,48,687	0/0:42,0:42:99:0,123,1985	0/0:33,0:33:93.29:0,93,1462	0/0:19,0:19:54.16:0,54,835	0/0:27,0:27:78.26:0,78,1236	0/0:24,0:24:72.25:0,72,1168	0/0:38,0:38:99:0,111,1805	0/0:24,0:24:72.23:0,72,1129	0/0:25,0:25:72.25:0,72,1169	0/0:19,0:19:57.19:0,57,927	0/0:18,0:18:54.18:0,54,881	1/1:0,18:19:39.13:790,39,0	0/0:26,0:26:72.25:0,72,1168	0/0:24,0:24:72.25:0,72,1175	0/0:29,0:29:81.28:0,81,1318	0/0:28,0:28:84.28:0,84,1344	0/0:20,0:20:60.19:0,60,955	0/0:12,0:12:33.11:0,33,527	0/0:32,0:32:96.33:0,96,1565	0/0:36,0:36:99:0,108,1761	0/0:23,0:23:69.24:0,69,1123	0/0:16,0:16:48.16:0,48,780	0/0:22,0:22:63.22:0,63,1028	0/0:36,0:36:99:0,108,1737	0/0:4,0:4:12.02:0,12,171
chr10	101016004	.	A	AGATCTTG	3581.29	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.238;DP=650;FS=6.817;HRun=0;HaplotypeScore=149.7090;InbreedingCoeff=0.9701;MQ=85.58;MQ0=0;MQRankSum=-8.562;QD=89.53;ReadPosRankSum=-1.236;VQSLOD=4.3017;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,12:15:42.14:1660,42,0	0/0:11,0:11:33.11:0,33,857	0/0:24,0:24:66.22:0,66,1709	0/0:18,0:18:54.18:0,54,1303	0/0:39,0:39:99:0,114,3009	0/0:35,0:35:99:0,99,2552	0/0:19,0:19:57.20:0,57,1459	0/0:22,0:22:66.23:0,66,1771	0/0:23,0:23:69.24:0,69,1853	0/0:36,0:36:99:0,108,2706	0/0:23,0:23:69.24:0,69,1831	0/0:24,0:24:72.22:0,72,1828	0/0:20,0:20:60.19:0,60,1548	0/0:16,0:16:39.13:0,39,1052	1/1:12,13:25:57.18:1921,57,0	0/0:23,0:23:69.22:0,69,1804	0/0:24,0:24:72.23:0,72,1845	0/0:24,0:24:72.25:0,72,1898	0/0:26,0:26:78.26:0,78,2017	0/0:20,0:20:60.19:0,60,1526	0/0:13,0:13:36.12:0,36,941	0/0:33,0:33:99:0,99,2558	0/0:39,0:39:99:0,105,2481	0/0:23,0:23:63.20:0,63,1609	0/0:17,0:17:51.14:0,51,1261	0/0:21,0:21:63.22:0,63,1672	0/0:34,0:34:99:0,102,2667	0/0:3,0:3:8.95:0,9,67
chr10	101017155	.	TA	T	1469.74	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.856;DP=602;FS=0.000;HRun=7;HaplotypeScore=62.2209;InbreedingCoeff=0.9917;MQ=82.31;MQ0=0;MQRankSum=-3.410;QD=27.22;ReadPosRankSum=2.441;VQSLOD=4.3568;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:34:96.22:979,96,0	0/0:6,0:6:18.06:0,18,226	0/0:22,0:22:51.15:0,51,615	0/0:20,0:20:48.11:0,48,567	0/0:30,0:30:90.29:0,90,1126	0/0:21,0:21:51.16:0,51,642	0/0:26,0:26:72.23:0,72,904	0/0:25,0:25:66.19:0,66,804	0/0:24,0:24:69.20:0,69,853	0/0:26,0:26:69.19:0,69,843	0/0:18,0:18:48.14:0,48,589	0/0:21,0:21:60.17:0,60,726	0/0:19,0:19:57.17:0,57,704	0/0:14,0:14:39.12:0,39,490	1/1:0,20:20:60.14:612,60,0	0/0:18,0:18:51.16:0,51,642	0/0:20,0:20:60.18:0,60,742	0/0:20,0:20:57.18:0,57,717	0/0:25,0:25:65.94:0,66,803	0/0:32,0:32:87.27:0,87,1082	0/0:16,0:16:45.14:0,45,566	0/0:20,0:20:48.14:0,48,591	0/0:16,0:16:44.96:0,45,562	0/0:23,0:23:66.16:0,66,800	0/0:18,0:18:51.16:0,51,641	0/0:23,0:23:63.20:0,63,792	0/0:38,0:38:99:0,105,1320	0/0:7,0:7:18.06:0,18,226
chr10	101017403	.	CA	C	2023.08	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=4.187;DP=643;FS=1.606;HRun=5;HaplotypeScore=100.3359;InbreedingCoeff=0.8352;MQ=70.13;MQ0=0;MQRankSum=0.824;QD=25.29;ReadPosRankSum=1.412;VQSLOD=2.6899;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,35:37:96.27:1089,96,0	0/0:7,0:7:21.07:0,21,287	0/1:8,0:8:0.39:0,0,83	0/0:8,0:8:7.53:0,8,62	0/0:24,0:24:66.21:0,66,887	0/0:25,0:25:75.21:0,75,1005	0/0:34,0:34:93.31:0,93,1272	0/0:35,0:35:96.32:0,96,1313	0/0:18,0:18:48.15:0,48,637	0/0:19,0:19:54.18:0,54,739	0/0:13,0:13:33.10:0,33,435	0/0:25,0:25:75.24:0,75,1012	0/0:22,0:22:66.21:0,66,886	0/0:29,0:29:81.24:0,81,1089	1/1:0,35:35:93.27:1055,93,0	0/0:24,0:24:72.24:0,72,985	0/0:27,0:27:78.26:0,78,1065	0/0:20,0:20:57.17:0,57,763	0/0:28,0:28:81.26:0,81,1091	0/0:19,0:19:57.19:0,57,780	0/0:24,0:24:69.21:0,69,926	0/0:16,0:16:48.15:0,48,640	0/0:18,0:18:54.18:0,54,738	0/0:31,0:31:93.31:0,93,1271	0/0:27,0:27:78.25:0,78,1053	0/0:28,0:28:81.27:0,81,1107	0/0:37,0:36:96.15:0,96,1311	0/0:5,0:5:15.05:0,15,205
chr10	101017674	.	TTAA	T	11000.71	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=4.196;DP=705;FS=6.057;HRun=0;HaplotypeScore=114.8575;InbreedingCoeff=0.9987;MQ=72.26;MQ0=0;MQRankSum=-4.203;QD=41.99;ReadPosRankSum=-0.545;VQSLOD=5.7114;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,2329	1/1:0,9:9:23.93:370,24,0	0/0:22,0:22:63.22:0,63,1379	0/0:9,0:9:19.71:0,20,398	0/0:29,0:29:87.28:0,87,1924	0/0:28,0:28:84.27:0,84,1861	0/0:18,0:18:51.16:0,51,1101	1/1:7,29:36:87.27:1396,87,0	1/1:1,20:21:60.21:999,60,0	0/0:28,0:28:84.29:0,84,1896	0/0:25,0:25:69.24:0,69,1546	0/0:23,0:23:69.24:0,69,1564	0/0:18,0:18:54.17:0,54,1177	0/0:20,0:20:60.21:0,60,1360	0/0:36,0:36:99:0,105,2358	1/1:0,24:24:60.21:999,60,0	0/0:25,0:25:72.25:0,72,1631	0/0:22,0:22:57.15:0,57,1243	1/1:3,17:20:48.16:800,48,0	1/1:1,49:50:99:2248,135,0	1/1:1,13:14:36.12:600,36,0	0/0:21,0:21:60.21:0,60,1357	0/0:31,0:31:87.30:0,87,1972	0/0:16,0:16:48.15:0,48,1037	0/0:36,0:36:99:0,102,2284	1/1:1,28:29:84.23:1342,84,0	1/1:3,44:47:99:1798,108,0	1/1:1,11:12:27.09:450,27,0
chr10	101018276	.	TTTTAACC	T	1007.95	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.914;DP=543;FS=5.234;HRun=0;HaplotypeScore=130.1242;InbreedingCoeff=0.9292;MQ=68.25;MQ0=0;MQRankSum=-6.504;QD=50.40;ReadPosRankSum=0.146;VQSLOD=3.3314;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.31:0,90,3193	0/0:14,0:14:39.13:0,39,1470	0/0:8,0:8:15.05:0,15,464	0/0:6,0:6:15.05:0,15,455	0/0:26,0:26:75.24:0,75,2756	0/0:29,0:29:87.30:0,87,3305	0/0:13,0:13:36.12:0,36,1364	0/0:31,0:31:87.29:0,87,3143	0/0:15,0:15:42.13:0,42,1484	0/0:28,0:28:81.28:0,81,2958	0/0:34,0:34:99:0,99,3729	0/0:9,0:9:27.09:0,27,1023	0/0:19,0:19:48.16:0,48,1821	0/0:23,0:23:69.24:0,69,2554	1/1:3,17:20:45.15:1103,45,0	0/0:15,0:15:45.15:0,45,1681	0/0:18,0:18:54.19:0,54,2064	0/0:11,0:11:30.07:0,30,1060	0/0:15,0:15:45.15:0,45,1461	0/0:31,0:31:84.29:0,84,3095	0/0:4,0:4:12.04:0,12,431	0/0:27,0:27:75.26:0,75,2845	0/0:24,0:24:72.25:0,72,2702	0/0:7,0:7:21.07:0,21,765	0/0:26,0:26:75.25:0,75,2660	0/0:25,0:25:72.25:0,72,2794	0/0:27,0:26:75.26:0,75,2817	0/0:7,0:7:18.06:0,18,611
chr10	101018834	.	T	TAAG	9975.06	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=2.414;DP=665;FS=7.943;HRun=0;HaplotypeScore=102.2469;InbreedingCoeff=0.9904;MQ=81.39;MQ0=0;MQRankSum=-6.209;QD=45.76;ReadPosRankSum=1.442;VQSLOD=6.4463;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.21:0,66,1010	1/1:1,7:8:21.07:454,21,0	0/0:17,0:17:33.11:0,33,495	0/0:20,0:20:38.02:0,38,690	0/0:33,0:33:93.29:0,93,1409	0/0:28,0:28:72.24:0,72,1126	0/0:11,0:11:30.08:0,30,446	1/1:10,15:26:48.12:924,48,0	1/1:5,15:20:36.12:779,36,0	0/0:32,0:32:75.26:0,75,1174	0/0:13,0:13:36.12:0,36,557	0/0:25,0:25:72.23:0,72,1101	0/0:33,0:33:87.27:0,87,1336	0/0:24,0:24:63.19:0,63,960	0/0:32,0:32:90.31:0,90,1408	1/1:2,17:22:44.52:972,45,0	0/0:35,0:35:99:0,102,1572	0/0:19,0:19:54.18:0,54,829	1/1:5,15:20:42.11:772,42,0	1/1:3,31:34:84.29:1791,84,0	1/1:2,22:25:57.20:1234,57,0	0/0:32,0:32:90.31:0,90,1407	0/0:19,0:19:48.16:0,48,750	0/0:16,0:16:45.15:0,45,700	0/0:32,0:32:93.28:0,93,1409	1/1:3,27:30:28.18:1491,28,0	1/1:4,20:25:63.22:1361,63,0	1/1:4,4:8:9.03:195,9,0
chr10	101018956	.	GA	G	685.31	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.177;DP=609;FS=13.911;HRun=2;HaplotypeScore=104.5846;InbreedingCoeff=0.8889;MQ=90.75;MQ0=0;MQRankSum=-13.982;QD=5.40;ReadPosRankSum=1.074;VQSLOD=-0.5447;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.14:0,63,877	1/1:8,0:8:9.72:27,10,0	0/0:31,0:31:80.87:0,81,1274	0/0:22,0:22:48.15:0,48,698	0/0:22,0:22:63.19:0,63,905	0/0:30,0:30:90.29:0,90,1325	0/0:26,0:26:69.23:0,69,1034	1/1:16,0:16:10.73:48,11,0	1/1:13,0:13:7.01:19,7,0	0/0:32,0:32:93.32:0,93,1393	0/0:16,0:16:48.16:0,48,718	0/0:19,0:19:54.18:0,54,808	0/0:43,0:43:99:0,129,1929	0/0:32,0:32:96.31:0,96,1419	0/0:25,0:25:75.25:0,75,1124	1/1:17,0:17:17.69:49,18,0	0/0:20,0:20:60.20:0,60,899	0/0:22,0:22:66.22:0,66,988	1/1:4,3:7:9.87:111,10,0	1/1:14,3:17:34.38:222,34,0	1/1:2,1:3:5.54:28,6,0	0/0:19,0:19:57.19:0,57,853	0/0:27,0:27:81.27:0,81,1214	0/0:41,0:41:99:0,123,1824	0/0:34,0:34:99:0,102,1491	1/1:12,8:20:0:296,0,0	1/1:23,0:23:26.05:70,26,0	1/1:3,0:3:5.67:16,6,0
chr10	101018957	.	A	ATTTAAGCAACC	15160.95	PASS	AB=0.704;AC=19;AF=0.339;AN=56;BaseQRankSum=4.573;DP=607;FS=2.892;HRun=0;HaplotypeScore=180.9527;InbreedingCoeff=0.8872;MQ=90.59;MQ0=0;MQRankSum=-13.883;QD=119.38;ReadPosRankSum=0.433;VQSLOD=5.3556;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.15:0,63,1953	1/1:0,6:8:18.06:1043,18,0	0/0:32,0:32:86.03:0,86,2590	0/0:20,0:20:48.05:0,48,1300	0/0:23,0:23:63.19:0,63,2092	0/0:30,0:30:90.28:0,90,2879	0/0:23,0:23:69.24:0,69,2456	1/1:1,5:17:45.08:1975,45,0	1/1:0,4:13:12.04:697,12,0	0/0:31,0:31:93.31:0,93,3242	0/0:16,0:16:48.15:0,48,1682	0/0:18,0:18:54.17:0,54,1902	0/0:43,0:43:99:0,129,4628	0/0:32,0:32:96.32:0,96,3486	0/0:25,0:25:75.26:0,75,2778	1/1:0,12:17:36.12:2084,36,0	0/0:20,0:20:60.21:0,60,2081	0/0:22,0:22:66.23:0,66,2437	1/1:6,1:7:18.02:716,18,0	1/1:9,8:17:51.13:2111,51,0	1/1:3,0:3:6.02:107,6,0	0/0:19,0:19:57.20:0,57,2100	0/0:29,0:29:81.28:0,81,2873	0/0:42,0:42:99:0,123,4415	0/0:34,0:34:99:0,102,3515	0/1:11,8:19:54.64:2620,0,55	1/1:0,18:23:57.20:3285,57,0	1/1:0,3:3:9.03:524,9,0
chr10	101019022	.	G	GTCGA	11447.81	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=8.646;DP=626;FS=0.717;HRun=0;HaplotypeScore=110.5358;InbreedingCoeff=0.9906;MQ=89.22;MQ0=0;MQRankSum=-15.103;QD=67.34;ReadPosRankSum=-2.450;VQSLOD=5.9804;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.27:0,84,1641	1/1:2,7:10:30.07:718,30,0	0/0:33,0:33:84.26:0,84,1551	0/0:18,0:18:51.17:0,51,949	0/0:22,0:22:63.20:0,63,1209	0/0:24,0:24:66.23:0,66,1318	0/0:27,0:27:75.25:0,75,1464	1/1:6,23:32:84.29:2120,84,0	1/1:4,7:12:30.10:830,30,0	0/0:28,0:28:84.29:0,84,1646	0/0:19,0:19:51.17:0,51,961	0/0:17,0:17:51.16:0,51,970	0/0:39,0:39:99:0,117,2212	0/0:22,0:22:63.22:0,63,1216	0/0:25,0:25:75.24:0,75,1445	1/1:2,10:12:36.11:893,36,0	0/0:29,0:29:87.27:0,87,1671	0/0:26,0:26:75.23:0,75,1369	1/1:5,10:16:48.12:1261,48,0	1/1:4,19:26:60.21:1663,60,0	1/1:1,7:10:9.03:251,9,0	0/0:18,0:18:54.19:0,54,1079	0/0:23,0:23:66.23:0,66,1275	0/0:34,0:34:99:0,102,1944	0/0:23,0:23:66.23:0,66,1290	1/1:1,17:18:54.19:1504,54,0	1/1:11,14:25:66.18:1622,66,0	1/1:0,7:9:21.07:587,21,0
chr10	101019136	.	T	TTTC	11595.76	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=2.539;DP=797;FS=6.978;HRun=0;HaplotypeScore=119.8815;InbreedingCoeff=0.9887;MQ=86.73;MQ0=0;MQRankSum=-9.537;QD=52.23;ReadPosRankSum=-1.504;VQSLOD=6.3567;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,117,1833	1/1:1,9:10:30.10:627,30,0	0/0:34,0:34:81.26:0,81,1245	0/0:26,0:25:60.17:0,60,915	0/0:35,0:35:99:0,105,1663	0/0:16,0:16:45.15:0,45,714	0/0:32,0:32:84.26:0,84,1282	1/1:9,27:39:93.25:1893,93,0	1/1:3,13:16:42.14:894,42,0	0/0:32,0:32:81.27:0,81,1264	0/0:25,0:25:72.17:0,72,1065	0/0:24,0:24:66.23:0,66,1045	0/0:29,0:29:81.25:0,81,1239	0/0:38,0:38:99:0,105,1623	0/0:34,0:34:93.28:0,93,1407	1/1:5,17:22:57.20:1201,57,0	0/0:46,0:46:99:0,129,2020	0/0:29,0:29:87.30:0,87,1376	1/1:8,15:23:57.18:1166,57,0	1/1:7,18:25:9.44:981,9,0	1/1:0,21:21:54.19:1158,54,0	0/0:30,0:30:81.25:0,81,1232	0/0:23,0:23:60.18:0,60,904	0/0:42,0:42:99:0,114,1726	0/0:35,0:35:93.32:0,93,1475	1/1:1,19:21:15.63:1222,16,0	1/1:2,34:36:96.33:2059,96,0	1/1:1,7:8:18.06:393,18,0
chr10	101019655	.	TAG	T	1213.28	PASS	AB=0.967;AC=39;AF=0.722;AN=54;BaseQRankSum=-5.949;DP=265;FS=4.852;HRun=0;HaplotypeScore=97.3092;InbreedingCoeff=-0.2999;MQ=52.69;MQ0=0;MQRankSum=0.318;QD=4.68;ReadPosRankSum=-6.363;VQSLOD=-0.0583;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:29.49:199,29,0	./.	1/1:11,0:2:2.59:24,3,0	0/1:9,0:5:26.62:27,0,32	0/1:14,2:15:42.66:43,0,100	0/1:10,0:10:50.50:51,0,80	0/1:17,2:19:1.40:1,0,202	1/1:11,0:11:8.49:83,8,0	0/0:0,0:5:2.04:0,2,7	0/1:9,1:11:50.03:50,0,76	0/1:9,0:9:10.58:11,0,85	0/1:2,0:2:3.01:16,0,3	0/1:8,0:8:37.46:37,0,54	0/1:7,0:7:39.14:39,0,61	0/1:7,0:13:9.28:83,0,9	1/1:9,0:9:2.98:21,3,0	0/1:18,2:20:30.82:31,0,232	0/1:19,1:20:62.99:218,0,63	1/1:5,0:5:5.45:47,5,0	1/1:9,0:9:2.97:20,3,0	1/1:3,0:3:3:25,3,0	1/1:1,0:5:4.68:54,5,0	1/1:1,0:2:5.93:40,6,0	1/1:3,0:3:2.97:20,3,0	0/1:19,0:19:79.32:79,0,140	1/1:4,0:4:5.80:41,6,0	1/1:10,0:9:8.28:60,8,0	1/1:2,0:2:5.90:37,6,0
chr10	101019751	.	G	GAGGGAA	1467.65	PASS	AB=1.000;AC=15;AF=0.288;AN=52;BaseQRankSum=7.288;DP=293;FS=19.127;HRun=0;HaplotypeScore=88.5569;InbreedingCoeff=0.7206;MQ=78.16;MQ0=3;MQRankSum=-6.964;QD=30.58;ReadPosRankSum=-2.390;VQSLOD=1.4058;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:33.03:0,33,685	1/1:3,0:3:6.02:116,6,0	0/0:18,0:11:4.27:0,4,92	0/0:33,0:26:46:0,46,662	0/0:19,0:19:48.12:0,48,1026	0/0:18,0:17:51.16:0,51,1049	0/0:17,0:17:42.08:0,42,840	1/1:17,0:17:35.60:837,36,0	1/1:2,6:8:3.01:108,3,0	0/0:13,0:13:36.10:0,36,725	0/0:8,0:8:15.05:0,15,310	0/0:7,0:7:18.06:0,18,410	0/0:11,0:11:29.90:0,30,713	0/0:10,0:10:30.07:0,30,667	0/0:16,0:16:48.16:0,48,1149	1/1:0,4:4:3.01:108,3,0	0/0:17,0:17:51.02:0,51,1018	0/0:6,0:6:18.06:0,18,432	1/1:1,0:1:3.01:61,3,0	1/1:7,0:6:12:171,12,0	1/1:4,0:4:6.91:104,7,0	0/0:5,0:5:12.03:0,12,241	0/0:5,0:5:15:0,15,250	0/0:10,0:10:27.04:0,27,644	0/0:9,0:9:27.09:0,27,605	0/1:4,0:4:50.08:129,0,50	./.	./.
chr10	101020314	.	G	GC	1102.45	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.542;DP=653;FS=0.756;HRun=0;HaplotypeScore=93.6662;InbreedingCoeff=0.9808;MQ=69.43;MQ0=6;MQRankSum=0.057;QD=34.45;ReadPosRankSum=0.905;VQSLOD=3.1039;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:75.26:1197,75,0	0/0:10,0:10:30.10:0,30,419	0/0:21,0:19:53.14:0,53,646	0/0:28,0:27:74.99:0,75,904	0/0:11,0:11:27.09:0,27,378	0/0:25,0:25:69.23:0,69,964	0/0:33,0:33:90.30:0,90,1258	0/0:32,0:30:90.28:0,90,1237	0/0:18,0:17:51.17:0,51,711	0/0:18,0:18:54.16:0,54,736	0/0:13,0:13:33.11:0,33,461	0/0:18,0:18:54.18:0,54,754	0/0:19,0:19:51.17:0,51,712	0/0:27,0:27:75.25:0,75,1047	0/0:30,0:30:75.25:0,75,1047	0/0:35,0:34:93.31:0,93,1298	0/0:37,0:37:99:0,108,1510	0/0:24,0:24:66.22:0,66,923	0/0:18,0:18:51.16:0,51,698	0/0:28,0:27:72.24:0,72,1004	0/0:41,0:41:99:0,114,1590	0/0:6,0:6:15.05:0,15,210	0/0:15,0:15:39.13:0,39,545	0/0:32,0:31:81.27:0,81,1132	0/0:23,0:23:57.18:0,57,780	0/0:26,0:26:69.23:0,69,965	0/0:25,0:25:72.24:0,72,1005	0/0:8,0:8:24.08:0,24,336
chr10	101020895	.	GCACACA	G	998.58	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=3.603;DP=657;FS=1.816;HRun=0;HaplotypeScore=188.0577;InbreedingCoeff=0.7783;MQ=63.97;MQ0=6;MQRankSum=-2.176;QD=11.61;ReadPosRankSum=1.070;VQSLOD=2.6623;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:44:0.98:0,1,126	0/0:10,0:11:9.03:0,9,225	./.	0/0:24,0:21:8.53:0,9,132	0/0:23,0:26:30.03:0,30,690	0/0:25,0:28:62.43:0,62,1645	0/0:28,0:29:60.14:0,60,1372	0/0:19,0:19:19.50:0,20,158	0/0:24,0:27:27.06:0,27,626	0/0:24,0:22:39.05:0,39,894	0/0:13,0:14:21.07:0,21,400	1/1:8,23:32:37.01:748,37,0	0/0:16,0:18:30.10:0,30,919	0/0:30,0:31:58.61:0,59,1529	0/0:15,0:30:20.89:0,21,220	0/0:11,0:13:15.05:0,15,312	0/0:22,0:24:51.17:0,51,1407	0/0:25,0:28:53.39:0,53,1386	0/0:18,0:18:4.25:0,4,29	0/0:21,0:26:17.09:0,17,286	0/0:37,0:38:21.55:0,22,773	1/1:13,13:25:8.92:166,9,0	1/1:6,8:15:6.90:96,7,0	1/1:11,2:13:8.85:130,9,0	0/0:24,0:24:51.14:0,51,1093	0/0:17,0:18:27.05:0,27,479	0/0:26,0:28:33.01:0,33,686	0/0:4,0:4:6.02:0,6,152
chr10	101020923	.	A	ACACG	3853.86	PASS	AB=0.871;AC=18;AF=0.321;AN=56;BaseQRankSum=9.151;DP=731;FS=9.539;HRun=0;HaplotypeScore=189.0566;InbreedingCoeff=0.6836;MQ=50.23;MQ0=12;MQRankSum=-2.272;QD=14.38;ReadPosRankSum=-1.634;VQSLOD=1.9602;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:45.68:0,46,634	1/1:2,7:12:11.91:199,12,0	0/0:14,0:6:11.97:0,12,118	0/0:29,0:13:21.13:0,21,184	0/0:25,0:25:50.88:0,51,570	0/0:34,0:34:89.75:0,90,1206	0/0:29,0:29:43.67:0,44,964	1/1:8,0:23:44.97:355,45,0	0/1:15,7:23:1.95:575,0,2	0/0:23,0:21:56.66:0,57,692	0/0:15,0:15:33.04:0,33,400	0/0:38,0:38:75.02:0,75,724	0/0:19,0:19:50.78:0,51,696	0/0:33,0:33:76.31:0,76,1100	0/1:30,0:30:63.01:63,0,231	0/1:15,3:18:19.84:318,0,20	0/0:24,0:24:66.11:0,66,991	0/0:29,0:29:55.46:0,55,844	1/1:14,0:12:12.62:84,13,0	1/1:26,4:29:32.39:301,32,0	1/1:54,3:61:46.15:746,46,0	0/0:34,0:34:55.47:0,55,469	0/0:14,0:14:17.90:0,18,151	0/0:20,0:20:41.92:0,42,343	0/0:27,0:27:47.57:0,48,766	0/1:20,2:22:9.43:401,0,9	1/1:15,6:24:35.24:652,35,0	1/1:0,5:6:6.02:160,6,0
chr10	101021024	.	G	GCACACACATATA	7157.89	PASS	AB=0.603;AC=20;AF=0.357;AN=56;BaseQRankSum=12.831;DP=924;FS=6.011;HRun=0;HaplotypeScore=316.2002;InbreedingCoeff=0.7684;MQ=58.97;MQ0=0;MQRankSum=-10.636;QD=23.16;ReadPosRankSum=-4.206;VQSLOD=2.1889;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,17:40:5.49:352,0,5	1/1:3,8:12:6.02:357,6,0	0/0:44,0:39:71.18:0,71,2071	0/0:57,0:53:99:0,108,2425	0/0:30,0:30:72.23:0,72,2272	0/0:25,0:25:63.20:0,63,1924	0/0:35,0:35:84.29:0,84,2721	1/1:36,0:36:60.19:1385,60,0	1/1:33,0:33:45.91:1129,46,0	0/0:40,0:40:84.21:0,84,2843	0/0:15,0:15:45.15:0,45,1443	0/0:39,0:39:99:0,99,2965	0/0:36,0:36:78.21:0,78,2323	0/0:49,0:49:99:0,126,3852	0/0:47,0:47:99:0,126,4021	1/1:1,20:24:6.02:355,6,0	0/0:39,0:39:96.31:0,96,3085	0/0:29,0:29:66.23:0,66,2155	1/1:22,0:20:33.11:840,33,0	1/1:8,23:33:6.02:257,6,0	1/1:53,0:52:47.48:982,47,0	0/0:33,0:33:81.26:0,81,2507	0/0:22,0:22:54.17:0,54,1748	0/0:47,0:48:99:0,117,3752	0/0:26,0:26:63.22:0,63,2086	0/1:8,12:24:65.32:1081,0,65	1/1:8,15:25:6.02:339,6,0	1/1:5,0:5:3.01:81,3,0
chr10	101022017	.	C	CA	1128.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.385;DP=713;FS=5.116;HRun=5;HaplotypeScore=123.4938;InbreedingCoeff=0.9489;MQ=61.48;MQ0=0;MQRankSum=0.945;QD=28.22;ReadPosRankSum=-0.441;VQSLOD=2.1586;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,36:40:93.30:1224,93,0	0/0:7,0:7:12.03:0,12,129	0/0:23,0:21:47.24:0,47,515	0/0:23,0:23:63.15:0,63,670	0/0:16,0:16:39.08:0,39,410	0/0:22,0:22:60.15:0,60,645	0/0:23,0:23:66.13:0,66,692	0/0:47,2:47:32.19:0,32,1119	0/0:16,0:16:39.10:0,39,419	0/0:23,0:23:63.15:0,63,671	0/0:25,0:25:69.15:0,69,726	0/0:28,0:28:84.17:0,84,879	0/0:34,0:34:90.17:0,90,947	0/0:27,0:27:75.19:0,75,806	0/0:37,0:37:96.23:0,96,1025	0/0:30,0:30:81.20:0,81,870	0/0:35,0:35:99:0,99,1046	0/0:22,0:23:54.78:0,55,609	0/0:23,0:22:15.39:0,15,556	0/0:28,0:28:66.14:0,66,700	0/0:28,0:27:57:0,57,595	0/0:26,0:26:66.16:0,66,709	0/0:23,0:23:54.12:0,54,572	0/0:25,0:25:69.05:0,69,697	0/0:21,0:21:63.14:0,63,669	0/0:30,0:30:81.17:0,81,859	0/0:22,0:22:57.12:0,57,602	0/0:6,0:6:18.05:0,18,193
chr10	101022022	.	A	AT	318.78	PASS	AB=0.920;AC=3;AF=0.054;AN=56;BaseQRankSum=2.566;DP=690;FS=5.179;HRun=0;HaplotypeScore=123.4443;InbreedingCoeff=0.6343;MQ=61.33;MQ0=0;MQRankSum=0.360;QD=5.31;ReadPosRankSum=0.078;VQSLOD=3.2685;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:43.97:397,44,0	0/0:6,0:6:14.96:0,15,184	0/0:22,0:20:56.65:0,57,668	0/0:23,0:23:63.14:0,63,841	0/0:14,0:14:39.11:0,39,526	0/0:24,0:24:72.18:0,72,937	0/0:24,0:24:72.20:0,72,955	0/0:46,2:45:19.20:0,19,1522	0/0:15,0:15:39.13:0,39,543	0/0:22,0:22:66.21:0,66,893	0/0:24,0:24:72.20:0,72,954	0/0:30,0:30:87.25:0,87,1165	0/0:30,0:30:90.30:0,90,1253	0/0:27,0:27:78.25:0,78,1073	0/0:34,0:34:99:0,102,1388	0/0:31,0:31:81.27:0,81,1128	0/0:35,0:35:99:0,105,1413	0/0:21,0:21:63.02:0,63,833	0/1:21,2:22:27.49:27,0,730	0/0:26,0:26:75.09:0,75,972	0/0:25,0:24:63.10:0,63,823	0/0:22,0:22:66.22:0,66,922	0/0:23,0:23:69.07:0,69,846	0/0:23,0:23:69.12:0,69,899	0/0:22,0:22:66.17:0,66,898	0/0:32,0:32:84.24:0,84,1145	0/0:21,0:21:60.16:0,60,809	0/0:6,0:6:18.06:0,18,250
chr10	101022053	.	G	GGT	7891.53	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=16.653;DP=647;FS=46.006;HRun=0;HaplotypeScore=106.1415;InbreedingCoeff=0.9970;MQ=62.29;MQ0=0;MQRankSum=-10.822;QD=42.20;ReadPosRankSum=-0.293;VQSLOD=2.1456;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,1525	1/1:2,7:9:24.08:433,24,0	0/0:19,0:19:57.19:0,57,828	0/0:26,0:26:56.91:0,57,828	0/0:17,0:17:51.17:0,51,751	0/0:24,0:24:69.22:0,69,987	0/0:28,0:28:84.27:0,84,1213	1/1:9,23:24:72.20:1260,72,0	1/1:0,9:9:24.08:437,24,0	0/0:23,0:23:63.21:0,63,928	0/0:30,0:30:87.29:0,87,1279	0/0:27,0:27:81.27:0,81,1192	0/0:23,0:23:69.22:0,69,997	0/0:36,0:36:99:0,108,1539	0/0:27,0:27:81.27:0,81,1193	1/1:3,20:23:54.18:967,54,0	0/0:36,0:36:86.32:0,86,1499	0/0:23,0:23:47.81:0,48,951	1/1:5,13:14:36.12:658,36,0	1/1:6,16:21:42.14:764,42,0	1/1:1,23:23:57.20:1038,57,0	0/0:22,0:22:60.20:0,60,882	0/0:24,0:24:69.22:0,69,994	0/0:18,0:18:54.18:0,54,795	0/0:18,0:18:54.18:0,54,794	1/1:1,23:24:60.21:1075,60,0	1/1:0,19:19:54.19:986,54,0	1/1:0,5:6:15.05:274,15,0
chr10	101022258	.	T	TC	2152.44	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=11.131;DP=468;FS=40.508;HRun=5;HaplotypeScore=74.9489;InbreedingCoeff=0.9477;MQ=70.64;MQ0=0;MQRankSum=-9.835;QD=21.10;ReadPosRankSum=-3.023;VQSLOD=0.5459;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:63.15:0,63,677	1/1:6,8:14:21.07:275,21,0	0/0:21,0:20:48.04:0,48,492	0/0:19,0:18:27.27:0,27,385	0/0:10,0:10:30.08:0,30,322	0/0:18,0:18:48.10:0,48,506	0/0:29,0:29:84.18:0,84,885	1/1:6,12:18:39.09:480,39,0	1/1:2,5:7:18.05:223,18,0	0/0:16,0:16:42.10:0,42,446	0/0:6,0:6:15.04:0,15,161	0/0:22,0:22:54.13:0,54,580	0/0:22,0:22:63.16:0,63,677	0/0:29,0:29:78.19:0,78,837	0/0:14,0:14:39.10:0,39,419	1/1:1,8:9:27.08:342,27,0	0/0:30,0:30:84.21:0,84,903	0/0:29,0:29:75.19:0,75,805	1/1:0,2:2:6.02:78,6,0	1/1:4,4:8:12.04:158,12,0	1/1:6,21:27:35.96:472,36,0	0/0:7,0:7:21.05:0,21,225	0/0:10,0:9:24.06:0,24,258	0/0:34,0:34:90.23:0,90,966	0/0:23,0:23:57.12:0,57,603	1/1:3,5:8:9.03:118,9,0	1/1:1,3:4:9:100,9,0	1/1:2,3:5:9.03:118,9,0
chr10	101022421	.	G	GGCAAACGGACA	23020.46	PASS	AB=0.818;AC=27;AF=0.482;AN=56;BaseQRankSum=8.739;DP=622;FS=1.835;HRun=0;HaplotypeScore=223.2505;InbreedingCoeff=0.9238;MQ=81.16;MQ0=0;MQRankSum=-18.072;QD=93.20;ReadPosRankSum=-1.913;VQSLOD=4.6080;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,3847	1/1:6,0:12:27.09:891,27,0	0/0:29,0:29:66.22:0,66,2077	0/0:14,0:14:39.13:0,39,1280	0/0:25,0:25:69.24:0,69,2366	0/0:29,0:29:84.29:0,84,2858	0/0:23,0:23:66.23:0,66,2330	1/1:28,0:36:87.12:2304,87,0	1/1:8,0:11:27.05:918,27,0	0/0:37,0:37:99:0,102,3453	0/0:24,0:24:69.21:0,69,2316	1/1:5,23:28:84.29:4663,84,0	0/0:28,0:28:81.25:0,81,2677	0/0:27,0:27:72.23:0,72,2414	0/0:24,0:24:72.25:0,72,2369	1/1:5,0:9:21.07:694,21,0	0/0:29,0:29:81.26:0,81,2690	0/0:14,0:14:30.10:0,30,1059	1/1:9,0:11:24.07:662,24,0	1/1:8,0:14:35.90:1009,36,0	1/1:4,0:6:15.01:457,15,0	1/1:6,14:24:57.15:2943,57,0	1/1:6,18:25:69.19:3548,69,0	1/1:9,8:19:17.48:756,17,0	0/0:31,0:31:81.28:0,81,2691	0/1:14,0:18:99:1033,0,154	1/1:4,0:16:42.14:1486,42,0	1/1:3,0:16:48.07:1656,48,0
chr10	101022501	.	A	ACTAG	9859.52	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=12.957;DP=640;FS=31.429;HRun=0;HaplotypeScore=140.9767;InbreedingCoeff=0.9942;MQ=80.97;MQ0=0;MQRankSum=-14.756;QD=62.40;ReadPosRankSum=-0.026;VQSLOD=3.4659;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,2000	1/1:6,8:14:24.08:655,24,0	0/0:22,0:22:60.21:0,60,1136	0/0:24,0:24:66.20:0,66,1159	0/0:26,0:26:75.24:0,75,1419	0/0:36,0:36:99:0,102,1911	0/0:23,0:23:69.24:0,69,1337	1/1:9,9:18:51.18:1365,51,0	1/1:4,14:18:42.14:1147,42,0	0/0:35,0:35:93.32:0,93,1803	0/0:19,0:19:54.19:0,54,1046	0/0:19,0:19:48.16:0,48,930	0/0:35,0:35:99:0,105,2034	0/0:27,0:27:81.28:0,81,1570	0/0:44,0:44:99:0,132,2476	1/1:2,20:22:57.20:1557,57,0	0/0:29,0:28:84.29:0,84,1611	0/0:17,0:17:42.11:0,42,776	1/1:5,4:9:21.07:529,21,0	1/1:7,18:25:33.11:901,33,0	1/1:2,5:7:14.78:409,15,0	0/0:20,0:20:57.18:0,57,1069	0/0:22,0:22:60.19:0,60,1130	0/0:21,0:21:48.16:0,48,921	0/0:26,0:26:72.25:0,72,1395	1/1:6,17:23:63.22:1658,63,0	1/1:1,15:16:45.15:1229,45,0	1/1:1,5:6:15.05:410,15,0
chr10	101022561	.	C	CAT	6350.78	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=7.641;DP=611;FS=5.216;HRun=0;HaplotypeScore=129.5507;InbreedingCoeff=0.9837;MQ=65.83;MQ0=0;MQRankSum=-9.754;QD=37.80;ReadPosRankSum=0.425;VQSLOD=6.7083;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:75.18:0,75,936	1/1:0,8:8:18.06:308,18,0	0/0:15,0:14:11.33:0,11,103	0/0:9,0:8:10.04:0,10,76	0/0:19,0:19:51.17:0,51,670	0/0:28,0:28:69.21:0,69,891	0/0:26,0:26:63.17:0,63,798	1/1:8,30:40:96.26:1547,96,0	1/1:1,9:10:24.08:410,24,0	0/0:24,0:24:66.21:0,66,868	0/0:19,0:19:51.17:0,51,670	0/0:29,0:29:69.22:0,69,906	0/0:34,0:34:84.23:0,84,1059	0/0:22,0:22:66.21:0,66,867	0/0:41,0:41:99:0,102,1280	1/1:8,9:17:30.10:513,30,0	0/0:27,0:26:69.18:0,69,873	0/0:15,0:15:33.11:0,33,434	1/1:1,6:7:18.06:300,18,0	1/1:4,21:25:51.17:873,51,0	1/1:1,10:12:21.07:359,21,0	0/0:23,0:23:60.20:0,60,788	0/0:23,0:23:57.18:0,57,749	0/0:22,0:22:51.17:0,51,670	0/0:33,0:33:96.31:0,96,1262	1/1:5,19:24:57.19:963,57,0	1/1:3,14:17:42.14:719,42,0	1/1:0,8:8:21.07:359,21,0
chr10	101022613	.	CAT	C	1318.76	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.596;DP=619;FS=3.324;HRun=0;HaplotypeScore=145.0258;InbreedingCoeff=0.9609;MQ=69.58;MQ0=0;MQRankSum=0.444;QD=38.79;ReadPosRankSum=2.423;VQSLOD=5.1405;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:90.30:1414,90,0	0/0:4,0:4:12.04:0,12,242	0/0:9,0:9:26.84:0,27,400	0/0:20,0:20:32.27:0,32,655	0/0:21,0:21:63.22:0,63,1263	0/0:22,0:22:66.21:0,66,1302	0/0:35,0:35:99:0,102,1940	0/0:20,0:19:54.14:0,54,959	0/0:15,0:15:36.12:0,36,712	0/0:22,0:22:66.22:0,66,1305	0/0:22,0:22:66.21:0,66,1276	0/0:24,0:24:72.18:0,72,1400	0/0:33,0:33:99:0,99,1933	0/0:31,0:31:87.30:0,87,1766	0/0:35,0:35:99:0,102,1985	0/0:27,0:27:81.28:0,81,1628	0/0:20,0:20:60.19:0,60,1151	0/0:14,0:14:39.13:0,39,791	0/0:7,0:7:18.06:0,18,365	0/0:21,0:21:51.13:0,51,973	0/0:24,0:24:54.15:0,54,1054	0/0:26,0:26:72.25:0,72,1439	0/0:24,0:24:72.25:0,72,1460	0/0:21,0:21:60.19:0,60,1141	0/0:26,0:26:78.25:0,78,1496	0/0:28,0:28:78.15:0,78,1430	0/0:24,0:24:60.19:0,60,1150	0/0:10,0:10:30.10:0,30,606
chr10	101022731	.	TCA	T	534.43	PASS	AB=0.896;AC=25;AF=0.595;AN=42;BaseQRankSum=7.440;DP=472;FS=0.770;HRun=0;HaplotypeScore=74.5594;InbreedingCoeff=0.1952;MQ=69.16;MQ0=6;MQRankSum=-2.182;QD=1.90;ReadPosRankSum=0.345;VQSLOD=1.6206;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,2:23:6.22:27,0,6	./.	./.	./.	0/0:15,3:18:12.01:0,12,136	0/0:16,0:16:6:0,6,68	0/0:21,0:20:12.02:0,12,154	./.	1/1:6,0:10:5.68:28,6,0	0/0:15,0:15:6.01:0,6,58	0/1:13,0:13:3.16:3,0,124	1/1:10,0:14:9.46:43,9,0	0/1:14,3:18:14.36:14,0,158	0/0:21,0:21:27.04:0,27,338	0/1:20,9:33:50.25:244,0,50	1/1:6,0:14:16.42:76,16,0	0/1:20,1:20:6.99:7,0,288	0/1:15,0:16:25.27:25,0,190	./.	1/1:3,0:6:8.52:42,9,0	1/1:20,0:20:2.84:14,3,0	1/1:9,0:11:2.80:13,3,0	1/1:12,0:17:8.42:40,8,0	1/1:23,0:27:14.35:79,14,0	0/1:20,3:22:11.27:11,0,219	./.	1/1:11,0:13:2.84:14,3,0	./.
chr10	101022898	.	A	ATT	11077.78	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=16.709;DP=686;FS=6.495;HRun=1;HaplotypeScore=117.9872;InbreedingCoeff=0.9976;MQ=92.18;MQ0=0;MQRankSum=-8.105;QD=49.45;ReadPosRankSum=-0.223;VQSLOD=4.3436;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:99:0,99,1470	1/1:1,13:14:36.08:657,36,0	0/0:28,0:27:81.23:0,81,1175	0/0:34,0:34:90.21:0,90,1271	0/0:25,0:25:75.24:0,75,1126	0/0:28,0:28:78.26:0,78,1194	0/0:20,0:20:60.20:0,60,917	1/1:4,15:21:48.14:863,48,0	1/1:2,26:28:78.22:1468,78,0	0/0:25,0:25:72.24:0,72,1084	0/0:19,0:19:54.17:0,54,806	0/0:20,0:20:60.20:0,60,918	0/0:19,0:19:57.17:0,57,831	0/0:24,0:24:66.22:0,66,1010	0/0:32,0:32:87.74:0,88,1288	1/1:1,23:24:69.20:1279,69,0	0/0:27,0:27:66.17:0,66,944	0/0:23,0:23:66.22:0,66,1010	1/1:2,24:26:72.19:1319,72,0	1/1:2,14:16:42.01:697,42,0	1/1:1,33:34:92.89:1641,93,0	0/0:29,0:29:81.26:0,81,1215	0/0:28,0:28:84.27:0,84,1263	0/0:32,0:32:84.25:0,84,1241	0/0:14,0:14:42.14:0,42,643	1/1:3,28:33:99:1760,99,0	1/1:1,21:21:60.16:1104,60,0	1/1:0,6:6:15.05:290,15,0
chr10	101022958	.	AGT	A	733.26	PASS	AB=0.889;AC=26;AF=0.619;AN=42;BaseQRankSum=6.452;DP=563;FS=0.795;HRun=0;HaplotypeScore=118.3179;InbreedingCoeff=0.0651;MQ=59.23;MQ0=14;MQRankSum=-3.297;QD=2.18;ReadPosRankSum=3.436;VQSLOD=1.4612;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,4:39:26.61:27,0,38	./.	0/0:26,0:14:0.47:0,0,1	./.	0/0:15,0:15:2.99:0,3,23	0/0:24,0:29:15:0,15,145	0/1:23,1:25:28.42:28,0,139	./.	1/1:7,0:13:14.68:71,15,0	1/1:15,0:18:5.52:25,6,0	0/1:10,0:13:0:0,0,0	0/1:13,2:18:29.62:78,0,30	0/1:26,0:26:5.26:5,0,278	0/1:16,1:17:60.80:64,0,61	1/1:10,7:16:9.02:97,9,0	1/1:17,0:24:17.04:84,17,0	0/0:27,6:33:0.74:0,1,390	0/1:17,3:20:8.27:8,0,263	1/1:9,0:11:5.68:28,6,0	./.	./.	1/1:16,2:18:8.65:76,9,0	1/1:10,0:10:5.21:31,5,0	1/1:27,8:35:9.54:125,10,0	0/1:15,2:17:20.30:20,0,98	./.	1/1:8,0:14:19.89:98,20,0	./.
chr10	101023160	.	GA	G	5314.93	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.781;DP=542;FS=7.810;HRun=3;HaplotypeScore=83.3129;InbreedingCoeff=0.9816;MQ=78.40;MQ0=0;MQRankSum=-3.231;QD=33.64;ReadPosRankSum=0.316;VQSLOD=4.9476;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1509	1/1:0,4:4:9.03:111,9,0	0/0:15,0:15:41.96:0,42,518	0/0:17,0:17:48.12:0,48,650	0/0:22,0:22:63.19:0,63,869	0/0:25,0:25:69.23:0,69,993	0/0:15,0:15:42.13:0,42,588	1/1:2,23:25:69.19:831,69,0	1/1:1,22:23:66.21:816,66,0	0/0:16,0:16:48.09:0,48,636	0/0:8,0:8:20.98:0,21,276	0/0:16,0:16:45.08:0,45,589	0/0:23,0:23:60.19:0,60,847	0/0:23,0:23:66.14:0,66,923	0/0:31,0:31:90.28:0,90,1249	1/1:2,18:20:54.17:668,54,0	0/0:29,0:29:87.18:0,87,1188	0/0:24,0:24:69.23:0,69,993	1/1:1,15:16:42.08:488,42,0	1/1:0,8:8:24.08:297,24,0	1/1:0,11:11:30.09:372,30,0	0/0:22,0:22:63.19:0,63,867	0/0:16,0:16:48.15:0,48,674	0/0:28,0:28:84.28:0,84,1209	0/0:18,0:18:48.15:0,48,672	1/1:0,20:20:57.17:697,57,0	1/1:1,26:27:75.23:922,75,0	1/1:0,4:4:9.03:112,9,0
chr10	101023376	.	T	TC	2281.55	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=8.639;DP=297;FS=58.342;HRun=6;HaplotypeScore=69.7592;InbreedingCoeff=0.8970;MQ=81.31;MQ0=2;MQRankSum=-8.516;QD=26.22;ReadPosRankSum=1.248;VQSLOD=-0.7092;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:46.96:0,47,426	1/1:2,1:3:3.01:38,3,0	0/0:22,0:19:31.91:0,32,341	0/0:21,0:16:32.85:0,33,304	0/0:12,0:12:33.07:0,33,337	0/0:13,0:13:33.05:0,33,325	0/0:10,0:10:24.05:0,24,245	1/1:2,11:13:33.11:415,33,0	1/1:0,11:11:27.09:335,27,0	0/0:5,0:5:15.03:0,15,153	0/0:10,0:10:27.03:0,27,257	0/0:8,0:8:24.05:0,24,245	0/0:9,0:8:20.96:0,21,187	0/0:5,0:5:12.02:0,12,117	0/0:9,0:9:21.03:0,21,208	1/1:2,7:9:24.08:300,24,0	0/0:21,0:22:41.10:0,41,395	0/0:8,0:8:17.95:0,18,169	1/1:3,6:9:21.06:252,21,0	1/1:1,2:3:3.01:38,3,0	1/1:2,12:14:27.09:339,27,0	0/0:9,0:9:27.04:0,27,264	0/0:4,0:4:9.01:0,9,85	0/0:20,0:20:41.38:0,41,388	0/0:5,0:5:15.03:0,15,152	1/1:3,6:9:21.02:244,21,0	1/1:0,14:14:39.12:490,39,0	1/1:1,1:2:3.01:38,3,0
chr10	101023412	.	AAG	A	568.73	PASS	AB=0.923;AC=10;AF=0.179;AN=56;BaseQRankSum=6.386;DP=300;FS=23.933;HRun=0;HaplotypeScore=109.0962;InbreedingCoeff=-0.2042;MQ=43.61;MQ0=47;MQRankSum=-5.172;QD=4.34;ReadPosRankSum=-2.069;VQSLOD=0.9891;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:22:35.06:0,35,637	0/1:9,1:9:62.67:63,0,128	0/1:17,1:5:3.17:3,0,27	0/0:14,1:5:8.99:0,9,105	0/0:9,0:9:24.08:0,24,396	0/0:8,0:8:17.52:0,18,270	0/0:11,0:7:12.04:0,12,200	0/1:9,1:5:31.82:32,0,87	0/1:7,0:7:17.39:17,0,67	0/0:8,0:6:18.06:0,18,318	0/0:8,0:7:15.05:0,15,279	0/0:2,0:2:5.99:0,6,60	0/0:6,0:5:12.04:0,12,174	0/0:4,0:1:2.98:0,3,21	0/0:6,0:5:14.96:0,15,156	0/1:14,3:17:99:189,0,213	0/0:15,0:13:26.76:0,27,393	0/0:12,0:9:14.71:0,15,207	0/1:16,0:13:16.99:17,0,133	0/0:7,1:7:12.04:0,12,156	0/1:10,0:6:15.67:32,0,16	0/0:9,0:7:21.06:0,21,335	0/0:4,0:3:9.02:0,9,140	0/0:12,0:9:14.80:0,15,176	0/0:5,0:4:12.04:0,12,190	0/1:17,2:17:99:116,0,282	0/1:10,5:14:7.80:186,0,8	0/1:8,0:7:51.66:52,0,90
chr10	101023630	.	GC	G	3720.17	PASS	AB=0.913;AC=25;AF=0.446;AN=56;BaseQRankSum=4.598;DP=491;FS=14.824;HRun=10;HaplotypeScore=63.1563;InbreedingCoeff=0.6186;MQ=69.34;MQ0=0;MQRankSum=-4.091;QD=14.15;ReadPosRankSum=3.104;VQSLOD=2.2295;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:69.16:0,69,747	1/1:3,8:11:17.97:156,18,0	0/1:12,1:13:40.92:41,0,56	0/1:14,0:13:8.32:8,0,110	0/0:17,2:19:19.03:0,19,418	0/1:15,2:17:13.01:13,0,326	0/0:20,1:21:25.56:0,26,498	1/1:7,18:26:54.81:454,55,0	1/1:1,13:14:32.99:286,33,0	0/1:12,2:14:25.04:25,0,205	0/1:11,2:13:18.97:19,0,258	0/0:4,0:17:25.82:0,26,150	0/0:14,1:15:7.05:0,7,296	0/0:20,0:21:56.93:0,57,571	0/0:1,0:6:5.85:0,6,47	1/1:3,20:24:16.82:363,17,0	0/0:18,1:19:28.08:0,28,530	0/0:17,3:20:21.29:0,21,445	1/1:5,13:18:32.97:286,33,0	1/1:0,11:11:29.99:260,30,0	1/1:4,15:20:44.02:370,44,0	0/0:2,0:12:23.02:0,23,138	0/0:3,0:11:14.33:0,14,77	0/0:10,0:22:34.75:0,35,239	0/0:14,0:14:27.07:0,27,299	1/1:4,22:27:68.20:579,68,0	1/1:2,19:21:47.98:416,48,0	1/1:1,19:20:50.99:443,51,0
chr10	101024295	.	TC	T	6255.74	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=17.942;DP=596;FS=12.983;HRun=2;HaplotypeScore=113.5547;InbreedingCoeff=0.9467;MQ=83.12;MQ0=0;MQRankSum=-10.508;QD=33.10;ReadPosRankSum=2.117;VQSLOD=3.2991;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,1746	1/1:0,4:4:12.04:151,12,0	0/0:24,0:25:69.78:0,70,926	0/0:19,0:19:51.15:0,51,710	0/0:19,0:19:57.18:0,57,823	0/0:27,0:27:81.25:0,81,1182	0/0:32,0:32:93.30:0,93,1363	1/1:0,28:28:54.16:686,54,0	1/1:2,28:30:78.25:1011,78,0	0/0:22,0:22:66.22:0,66,979	0/0:17,0:17:51.16:0,51,739	0/0:17,0:17:48.16:0,48,719	0/0:17,0:17:51.17:0,51,764	0/0:34,0:34:99:0,102,1523	0/0:24,0:24:72.24:0,72,1079	1/1:0,28:28:75.24:972,75,0	0/0:34,0:34:99:0,102,1480	0/0:12,0:12:36.09:0,36,516	1/1:0,15:15:45.15:584,45,0	1/1:0,21:21:48.16:622,48,0	1/1:1,9:10:24.08:311,24,0	0/0:7,0:7:21.07:0,21,310	0/0:19,0:19:57.17:0,57,808	0/0:22,0:22:66.22:0,66,988	0/0:19,0:19:57.17:0,57,826	1/1:1,14:15:0.12:481,0,0	1/1:0,35:35:99:1321,102,0	1/1:0,3:3:9.03:117,9,0
chr10	101024502	.	CAA	C	6350.48	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=17.143;DP=580;FS=0.696;HRun=8;HaplotypeScore=103.7659;InbreedingCoeff=0.9600;MQ=73.81;MQ0=0;MQRankSum=-11.846;QD=31.75;ReadPosRankSum=1.644;VQSLOD=4.7138;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:75.26:0,75,1268	1/1:1,7:8:21.06:256,21,0	0/0:19,0:19:36.59:0,37,574	0/0:9,0:9:17.95:0,18,254	0/0:22,0:22:54.18:0,54,912	0/0:18,0:18:48.16:0,48,812	0/0:17,0:17:48.16:0,48,809	1/1:3,20:23:60.19:732,60,0	1/1:0,18:18:45.14:549,45,0	0/0:22,0:22:60.21:0,60,1010	0/0:23,0:23:63.21:0,63,1034	0/0:15,0:15:42.14:0,42,710	0/0:21,0:21:60.21:0,60,1015	0/0:15,0:15:33.11:0,33,544	0/0:20,0:20:60.21:0,60,1015	1/1:0,21:21:60.19:731,60,0	0/0:30,0:30:87.25:0,87,1440	0/0:18,0:18:48.12:0,48,778	1/1:1,15:16:45.14:549,45,0	1/1:2,32:34:93.29:1134,93,0	1/1:3,13:16:36.11:439,36,0	0/0:18,0:18:48.16:0,48,809	0/0:33,0:33:81.21:0,81,1295	0/0:20,0:21:53.67:0,54,871	0/0:29,0:29:81.28:0,81,1363	1/1:5,16:21:0.40:534,0,0	1/1:2,34:36:96.30:1171,96,0	1/1:0,7:7:21.07:256,21,0
chr10	101024634	.	CG	C	2268.63	PASS	AB=0.679;AC=19;AF=0.339;AN=56;BaseQRankSum=15.295;DP=546;FS=22.914;HRun=4;HaplotypeScore=126.7097;InbreedingCoeff=0.8972;MQ=74.96;MQ0=0;MQRankSum=-15.156;QD=15.86;ReadPosRankSum=-0.290;VQSLOD=2.0703;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,1715	1/1:1,7:8:14.99:143,15,0	0/0:24,0:24:60.84:0,61,694	0/0:10,0:10:30.06:0,30,379	0/0:19,0:18:48.15:0,48,655	0/0:17,0:17:48.15:0,48,655	0/0:26,0:26:78.23:0,78,1046	1/1:6,17:20:29.99:278,30,0	1/1:4,16:20:50.59:408,51,0	0/0:16,0:16:42.13:0,42,572	0/0:20,0:20:48.15:0,48,648	0/0:29,0:29:72.21:0,72,970	0/0:24,0:24:72.22:0,72,983	0/0:20,0:20:57.18:0,57,777	0/0:30,0:30:90.28:0,90,1224	1/1:4,20:24:62.70:507,63,0	0/0:34,0:34:99:0,102,1373	0/0:34,0:34:99:0,99,1364	1/1:6,6:11:23.93:210,24,0	1/1:5,8:13:23.61:160,24,0	1/1:0,6:6:14.99:163,15,0	0/0:8,0:8:21.06:0,21,278	0/0:13,0:13:33.11:0,33,458	0/0:20,0:20:60.20:0,60,840	0/0:16,0:16:42.08:0,42,538	0/1:10,9:18:42.19:263,0,42	1/1:1,14:15:41.47:297,41,0	1/1:1,2:3:5.99:51,6,0
chr10	101024636	.	GGGA	G	1287.65	PASS	AB=0.907;AC=18;AF=0.321;AN=56;BaseQRankSum=15.264;DP=559;FS=22.560;HRun=0;HaplotypeScore=158.6480;InbreedingCoeff=0.7728;MQ=74.91;MQ0=0;MQRankSum=-15.254;QD=8.15;ReadPosRankSum=0.591;VQSLOD=1.2314;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,2751	1/1:9,0:9:13.19:118,13,0	0/0:25,0:25:54.01:0,54,1133	0/0:10,0:10:30.10:0,30,639	0/0:19,0:18:48.15:0,48,1051	0/0:17,0:17:51.16:0,51,1116	0/0:26,0:26:78.24:0,78,1656	0/1:26,2:25:30.15:111,0,30	1/1:19,1:20:41.06:271,41,0	0/0:15,0:15:45.15:0,45,972	0/0:20,0:20:54.18:0,54,1154	0/0:26,0:26:72.25:0,72,1660	0/0:24,0:24:72.25:0,72,1649	0/0:20,0:20:60.19:0,60,1299	0/0:32,0:32:96.32:0,96,2146	1/1:22,2:24:54.93:323,55,0	0/0:35,0:35:99:0,105,2395	0/0:34,0:34:99:0,102,2369	1/1:11,2:12:10.54:172,11,0	1/1:10,3:13:16.96:60,17,0	1/1:8,0:8:13.80:78,14,0	0/0:7,0:7:21.06:0,21,449	0/0:13,0:13:36.12:0,36,802	0/0:20,0:20:60.21:0,60,1392	0/0:16,0:16:45.10:0,45,859	0/1:19,3:21:99:203,0,113	1/1:18,0:18:3.58:122,4,0	1/1:3,0:3:5.58:26,6,0
chr10	101024650	.	G	GAA	4982.08	PASS	AB=0.593;AC=19;AF=0.339;AN=56;BaseQRankSum=15.611;DP=503;FS=25.797;HRun=1;HaplotypeScore=114.3591;InbreedingCoeff=0.9092;MQ=73.59;MQ0=0;MQRankSum=-15.016;QD=34.84;ReadPosRankSum=-1.845;VQSLOD=3.3699;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,1646	1/1:2,3:5:15.05:217,15,0	0/0:18,0:18:41.07:0,41,518	0/0:10,0:10:17.60:0,18,318	0/0:11,0:11:33.10:0,33,512	0/0:16,0:16:48.16:0,48,780	0/0:24,0:24:69.20:0,69,1072	1/1:1,24:23:51.17:865,51,0	1/1:4,12:16:45.15:653,45,0	0/0:17,0:17:48.16:0,48,748	0/0:13,0:13:39.13:0,39,629	0/0:21,0:21:60.19:0,60,949	0/0:26,0:26:75.06:0,75,1126	0/0:18,0:18:54.17:0,54,849	0/0:29,0:29:87.29:0,87,1389	1/1:4,16:21:60.15:876,60,0	0/0:38,0:38:99:0,114,1800	0/0:34,0:34:99:0,102,1642	1/1:0,9:9:27.05:399,27,0	1/1:1,8:9:24.08:349,24,0	1/1:0,11:11:20.63:151,21,0	0/0:6,0:6:18.06:0,18,291	0/0:11,0:11:33.10:0,33,496	0/0:18,0:18:54.17:0,54,854	0/0:12,0:12:33.11:0,33,527	0/1:5,11:16:52.10:520,0,52	1/1:1,25:26:51.17:805,51,0	1/1:2,2:4:12.01:148,12,0
chr10	101025137	.	TA	T	5906.83	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=16.616;DP=540;FS=2.961;HRun=6;HaplotypeScore=79.2889;InbreedingCoeff=0.9948;MQ=79.60;MQ0=0;MQRankSum=-1.249;QD=29.98;ReadPosRankSum=1.418;VQSLOD=5.5414;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.13:0,51,638	1/1:1,5:6:12.03:129,12,0	0/0:10,0:10:24.08:0,24,309	0/0:15,0:15:33.07:0,33,402	0/0:23,0:23:66.20:0,66,842	0/0:24,0:24:66.19:0,66,841	0/0:24,0:24:63.20:0,63,813	1/1:1,38:39:99:1182,111,0	1/1:0,13:13:36.09:387,36,0	0/0:19,0:19:54.18:0,54,709	0/0:15,0:15:42.11:0,42,522	0/0:14,0:14:42.14:0,42,553	0/0:24,0:24:63.19:0,63,814	0/0:14,0:14:42.13:0,42,540	0/0:19,0:19:51.17:0,51,671	1/1:0,22:22:66.17:709,66,0	0/0:25,0:25:72.19:0,72,912	0/0:29,0:29:87.20:0,87,1104	1/1:2,24:26:72.17:770,72,0	1/1:1,26:27:75.19:806,75,0	1/1:0,13:13:30.08:323,30,0	0/0:14,0:14:30.10:0,30,395	0/0:15,0:15:42.13:0,42,538	0/0:22,0:22:60.20:0,60,790	0/0:20,0:20:51.17:0,51,671	1/1:0,25:25:75.16:795,75,0	1/1:0,16:16:45.11:484,45,0	1/1:0,10:10:30.08:322,30,0
chr10	101025740	.	T	TGGG	10048.74	PASS	AB=0.611;AC=19;AF=0.339;AN=56;BaseQRankSum=16.745;DP=500;FS=66.683;HRun=1;HaplotypeScore=169.5141;InbreedingCoeff=0.8965;MQ=59.26;MQ0=0;MQRankSum=-16.378;QD=58.42;ReadPosRankSum=6.078;VQSLOD=1.2582;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:24.08:0,24,398	1/1:6,6:12:33.11:677,33,0	0/0:24,0:25:31.39:0,31,861	0/0:21,0:21:27.56:0,28,618	0/0:16,0:16:39.12:0,39,638	0/0:20,0:20:60.21:0,60,1050	0/0:32,0:32:90.29:0,90,1544	1/1:15,3:18:45.15:828,45,0	1/1:7,15:22:60.21:1333,60,0	0/0:18,0:18:48.16:0,48,828	0/0:13,0:13:36.11:0,36,606	0/0:13,0:13:9.03:0,9,158	0/0:18,0:18:51.16:0,51,870	0/0:20,0:20:48.16:0,48,841	0/0:12,0:12:30.10:0,30,526	1/1:4,20:24:69.24:1575,69,0	0/0:24,0:24:66.23:0,66,1156	0/0:31,0:31:70.35:0,70,1507	1/1:2,5:7:18.06:390,18,0	1/1:12,13:25:72.25:1534,72,0	1/1:6,6:12:27.08:484,27,0	0/0:11,0:11:18.45:0,18,282	0/0:9,0:9:21.05:0,21,349	0/0:13,0:13:15.01:0,15,205	0/0:15,0:15:39.13:0,39,685	0/1:8,14:22:39.63:1274,0,40	1/1:11,16:27:81.28:1770,81,0	1/1:2,1:3:9.03:186,9,0
chr10	101025742	.	T	TC	86.28	PASS	AB=0.733;AC=11;AF=0.196;AN=56;BaseQRankSum=-1.907;DP=422;FS=5.676;HRun=11;HaplotypeScore=138.8091;InbreedingCoeff=0.7257;MQ=64.91;MQ0=0;MQRankSum=1.201;QD=1.20;ReadPosRankSum=-3.473;VQSLOD=-0.2954;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,9:18:3.01:30,3,0	0/0:6,0:6:16.12:0,16,65	0/0:20,0:23:14.23:0,14,145	0/0:21,0:21:19.58:0,20,188	0/0:14,0:16:26.82:0,27,204	0/0:21,0:22:37.79:0,38,282	0/0:30,0:32:60.74:0,61,443	0/0:2,0:2:5.48:0,5,24	0/0:16,0:16:39.20:0,39,155	0/0:15,0:17:27.94:0,28,195	0/0:12,0:12:14.80:0,15,104	1/1:5,7:12:3.01:30,3,0	0/0:17,0:17:35.71:0,36,262	0/0:17,0:20:31.79:0,32,230	1/1:11,0:11:14.89:112,15,0	0/0:20,0:20:51.26:0,51,214	0/0:22,0:23:26.29:0,26,310	0/0:29,0:31:78.75:0,79,589	0/0:5,0:5:13.55:0,14,59	0/0:14,0:14:32.10:0,32,122	0/0:6,0:6:12.31:0,12,46	1/1:5,2:10:5.80:34,6,0	1/1:7,0:10:2.89:18,3,0	0/1:7,0:11:0.01:0,0,0	0/0:13,0:14:25.85:0,26,184	0/0:16,0:16:36.93:0,37,156	0/0:16,0:16:41.68:0,42,167	0/0:1,0:1:2.74:0,3,12
chr10	101025936	.	A	AT	7919.18	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=4.161;DP=666;FS=5.250;HRun=9;HaplotypeScore=84.6163;InbreedingCoeff=0.9304;MQ=67.88;MQ0=0;MQRankSum=-1.237;QD=24.67;ReadPosRankSum=-1.107;VQSLOD=5.0038;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:95.89:0,96,822	1/1:1,6:7:21.05:225,21,0	0/0:16,0:16:16.18:0,16,178	0/0:17,0:15:6.70:0,7,178	0/0:25,0:25:59.95:0,60,517	0/0:25,0:25:68.98:0,69,599	0/0:24,2:26:2.62:0,3,480	1/1:7,24:31:69.14:734,69,0	1/1:2,19:21:42.11:464,42,0	0/0:41,0:41:99:0,102,880	0/0:22,0:22:59.97:0,60,520	1/1:2,16:18:42.11:465,42,0	0/0:23,0:23:59.97:0,60,521	0/0:15,1:16:8.81:0,9,305	0/0:21,0:21:53.96:0,54,465	1/1:3,21:24:37.11:634,37,0	0/0:25,0:25:59.94:0,60,514	0/0:26,0:26:56.23:0,56,560	1/1:9,31:40:44.22:934,44,0	1/1:5,19:24:57.15:630,57,0	1/1:1,22:23:54.15:597,54,0	1/1:4,13:18:18.86:406,19,0	1/1:6,24:30:43.13:704,43,0	1/1:6,19:25:48.13:531,48,0	0/0:24,0:24:62.96:0,63,547	1/1:1,21:22:37.56:618,38,0	1/1:2,26:28:43.15:704,43,0	1/1:1,9:10:4.03:273,4,0
chr10	101026144	.	AAC	A	214.39	PASS	AB=0.920;AC=6;AF=0.107;AN=56;BaseQRankSum=9.081;DP=782;FS=0.000;HRun=0;HaplotypeScore=142.2223;InbreedingCoeff=0.2057;MQ=71.57;MQ0=0;MQRankSum=-8.178;QD=2.38;ReadPosRankSum=2.705;VQSLOD=2.3167;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,187,3337	0/0:16,0:16:0:0,0,102	0/0:20,0:20:56.75:0,57,909	0/0:25,0:25:66.16:0,66,1138	0/0:30,0:30:87.24:0,87,1539	0/0:24,0:24:72.23:0,72,1311	0/0:38,0:38:99:0,114,2117	0/0:35,0:35:57.19:0,57,1028	0/0:24,0:24:8.64:0,9,372	0/0:30,0:30:87.30:0,87,1622	0/0:11,0:11:33.11:0,33,618	0/0:30,0:30:81.28:0,81,1507	0/0:36,0:36:99:0,99,1833	0/0:39,0:39:99:0,114,2064	0/0:28,0:28:81.28:0,81,1503	0/0:30,0:30:24.17:0,24,499	0/0:51,0:51:99:0,153,2809	0/0:16,0:16:42.14:0,42,775	0/1:18,2:20:23.61:24,0,813	0/1:17,0:17:5.88:6,0,209	0/1:14,6:20:24.01:24,0,382	0/0:19,0:19:54.19:0,54,999	0/0:14,0:14:36.12:0,36,670	0/0:46,0:46:99:0,132,2425	0/0:33,0:33:90.31:0,90,1675	0/1:29,0:29:99:199,0,421	0/0:34,0:34:32.58:0,33,763	1/1:0,4:4:11.90:84,12,0
chr10	101026145	.	ACACTGTAGCAAGCTCAGAGAAT	A	5197.80	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.062;DP=771;FS=12.946;HRun=0;HaplotypeScore=422.0153;InbreedingCoeff=0.9314;MQ=71.25;MQ0=0;MQRankSum=-0.985;QD=23.20;ReadPosRankSum=-2.823;VQSLOD=1.5784;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,172,12867	1/1:3,12:15:15.79:411,16,0	0/0:20,0:20:40.38:0,40,1411	0/0:24,0:25:63.21:0,63,2979	0/0:30,0:30:69.24:0,69,4368	0/0:24,0:24:69.24:0,69,5368	0/0:38,0:38:93.32:0,93,6534	1/1:15,20:35:60.03:690,60,0	1/1:7,17:24:12.04:706,12,0	0/0:30,0:30:78.26:0,78,6082	0/0:11,0:11:33.10:0,33,2504	0/0:27,0:27:66.23:0,66,5246	0/0:35,0:35:90.31:0,90,7143	0/0:40,0:40:99:0,114,8442	0/0:27,0:27:72.23:0,72,5703	1/1:9,20:29:3.01:177,3,0	0/0:51,0:51:99:0,135,9189	0/0:15,0:15:39.13:0,39,2919	1/1:18,0:18:9.02:171,9,0	1/1:4,12:16:14.88:131,15,0	1/1:20,0:20:5.68:108,6,0	0/0:20,0:20:42.14:0,42,3106	0/0:14,0:14:36.12:0,36,3115	0/0:48,0:48:99:0,120,8437	0/0:30,0:30:90.31:0,90,7500	1/1:8,21:29:57.07:1734,57,0	1/1:14,20:34:15.05:844,15,0	1/1:4,0:4:12.04:226,12,0
chr10	101026888	.	G	GAA	11764.04	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-16.587;DP=746;FS=0.944;HRun=3;HaplotypeScore=79.3413;InbreedingCoeff=0.9954;MQ=84.72;MQ0=0;MQRankSum=-3.142;QD=50.49;ReadPosRankSum=-1.704;VQSLOD=3.8065;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,132,1847	1/1:1,4:5:12.04:220,12,0	0/0:29,0:29:78.23:0,78,1062	0/0:16,0:16:45.15:0,45,622	0/0:28,0:28:84.28:0,84,1175	0/0:28,0:28:81.27:0,81,1134	0/0:30,0:30:78.24:0,78,1073	1/1:0,30:30:90.31:1630,90,0	1/1:1,20:23:51.17:935,51,0	0/0:29,0:29:87.29:0,87,1218	0/0:21,0:21:63.21:0,63,882	0/0:22,0:22:57.19:0,57,796	0/0:39,0:39:99:0,105,1453	0/0:37,0:37:99:0,99,1369	0/0:35,0:35:90.23:0,90,1218	1/1:0,19:20:57.20:1046,57,0	0/0:27,0:27:75.25:0,75,1050	0/0:22,0:22:63.21:0,63,879	1/1:3,20:23:63.22:1155,63,0	1/1:0,32:32:96.29:1711,96,0	1/1:3,15:18:45.15:824,45,0	0/0:22,0:22:63.21:0,63,872	0/0:22,0:22:66.20:0,66,906	0/0:33,0:33:84.23:0,84,1154	0/0:24,0:24:69.22:0,69,949	1/1:2,23:25:72.20:1280,72,0	1/1:1,42:44:99:2248,123,0	1/1:0,13:13:39.13:715,39,0
chr10	101027156	.	A	AG	10779.73	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-12.626;DP=724;FS=0.000;HRun=5;HaplotypeScore=71.1848;InbreedingCoeff=0.9965;MQ=89.87;MQ0=0;MQRankSum=-9.462;QD=31.52;ReadPosRankSum=1.615;VQSLOD=5.4459;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,42:44:93.30:1223,93,0	1/1:1,8:9:18.05:223,18,0	0/0:35,0:35:99:0,99,1006	0/0:25,0:24:59.13:0,59,624	0/0:33,0:33:99:0,99,1040	0/0:25,0:25:72.03:0,72,748	0/0:26,0:26:78.16:0,78,821	1/1:6,20:30:71.91:821,72,0	1/1:0,26:26:75.24:987,75,0	0/0:25,0:25:69.16:0,69,731	0/0:28,0:28:84.08:0,84,884	1/1:0,23:23:57.19:750,57,0	0/0:36,0:36:87.17:0,87,905	0/0:25,0:25:72.14:0,72,747	0/0:36,0:36:99:0,99,1034	1/1:0,26:26:66.01:868,66,0	0/0:29,0:29:84.17:0,84,884	0/0:26,0:26:75.11:0,75,775	1/1:3,9:12:27.09:355,27,0	1/1:0,30:30:75.20:960,75,0	1/1:1,23:24:60.20:790,60,0	1/1:1,24:25:66.21:868,66,0	1/1:1,17:18:33.11:434,33,0	1/1:1,20:21:54.18:711,54,0	0/0:33,0:33:93.22:0,93,992	1/1:0,22:22:66.21:866,66,0	1/1:2,22:24:57.08:726,57,0	1/1:1,7:8:15.05:197,15,0
chr10	101027410	.	C	CT	9966.22	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=17.966;DP=834;FS=23.949;HRun=0;HaplotypeScore=141.7441;InbreedingCoeff=1.0000;MQ=89.70;MQ0=0;MQRankSum=-15.155;QD=42.96;ReadPosRankSum=-3.817;VQSLOD=1.6464;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,172,2374	1/1:1,17:18:51.17:790,51,0	0/0:30,0:30:81.18:0,81,1033	0/0:39,0:39:99:0,108,1352	0/0:36,0:36:99:0,105,1444	0/0:17,0:17:48.16:0,48,670	0/0:29,0:29:87.27:0,87,1197	1/1:1,33:34:99:1596,102,0	1/1:0,19:19:51.17:812,51,0	0/0:25,0:25:75.22:0,75,1027	0/0:19,0:19:57.16:0,57,775	0/0:32,0:32:96.31:0,96,1323	0/0:39,0:39:99:0,117,1562	0/0:43,0:43:99:0,129,1796	0/0:24,0:24:66.22:0,66,920	1/1:1,34:35:99:1567,99,0	0/0:34,0:34:99:0,102,1422	0/0:39,0:39:98.73:0,99,1489	1/1:2,16:18:48.16:746,48,0	1/1:0,33:33:99:1437,99,0	1/1:0,19:19:39.13:584,39,0	0/0:26,0:26:75.25:0,75,1047	0/0:27,0:27:81.27:0,81,1129	0/0:51,0:51:99:0,153,2104	0/0:32,0:32:96.28:0,96,1315	1/1:0,21:21:60.20:949,60,0	1/1:2,21:22:60.20:941,60,0	1/1:1,11:12:36.07:545,36,0
chr10	101028095	.	A	AT	4268.58	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=1.836;DP=710;FS=19.506;HRun=1;HaplotypeScore=147.1939;InbreedingCoeff=0.9954;MQ=87.35;MQ0=0;MQRankSum=2.593;QD=38.46;ReadPosRankSum=2.042;VQSLOD=2.6589;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:81.25:0,81,1114	0/0:15,0:15:42.14:0,42,545	0/0:19,0:19:53.07:0,53,677	0/0:33,0:33:89.41:0,89,1209	0/0:32,0:32:90.26:0,90,1219	0/0:27,0:27:78.26:0,78,1091	0/0:28,0:28:84.27:0,84,1158	0/0:41,0:41:99:0,108,1394	0/0:20,0:20:60.19:0,60,776	0/0:30,0:30:81.27:0,81,1132	0/0:28,0:28:69.21:0,69,947	1/1:1,27:28:72.25:1151,72,0	0/0:37,0:37:99:0,111,1551	0/0:25,0:25:75.25:0,75,1043	0/0:36,0:36:99:0,108,1511	0/0:24,0:24:69.22:0,69,895	0/0:26,0:26:78.21:0,78,1049	0/0:15,0:15:45.15:0,45,629	0/0:11,0:11:30.06:0,30,364	0/0:22,0:22:63.16:0,63,796	0/0:21,0:21:51.04:0,51,601	1/1:0,30:30:69.24:1103,69,0	1/1:1,26:27:54.18:863,54,0	1/1:0,26:26:72.25:1151,72,0	0/0:20,0:20:60.18:0,60,821	0/0:21,0:21:60.16:0,60,760	0/0:30,0:30:84.19:0,84,1054	0/0:6,0:6:15.05:0,15,195
chr10	101029012	.	T	TG	2008.24	PASS	AB=0.631;AC=10;AF=0.179;AN=56;BaseQRankSum=15.537;DP=588;FS=1.207;HRun=0;HaplotypeScore=116.8025;InbreedingCoeff=-0.2153;MQ=74.72;MQ0=1;MQRankSum=-15.146;QD=10.46;ReadPosRankSum=5.075;VQSLOD=3.9092;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.16:0,48,671	0/1:5,3:8:41.96:42,0,159	0/0:22,0:22:62.92:0,63,810	0/0:20,0:19:47.75:0,48,561	0/0:28,0:28:84.27:0,84,1159	0/0:32,0:32:93.30:0,93,1285	0/0:17,0:17:51.16:0,51,697	0/1:17,9:26:99:182,0,465	0/1:2,11:13:23.74:196,0,24	0/0:25,0:25:72.24:0,72,990	0/0:22,0:22:66.20:0,66,891	0/0:21,0:21:63.20:0,63,865	0/0:24,0:24:72.20:0,72,956	0/0:19,0:19:54.18:0,54,755	0/0:32,0:32:96.31:0,96,1327	0/1:3,17:20:40.24:311,0,40	0/0:23,0:23:69.20:0,69,944	0/0:11,0:11:33.11:0,33,461	0/1:8,13:21:99:275,0,165	0/1:12,22:34:99:317,0,293	0/1:6,7:13:71.53:72,0,162	0/0:27,0:27:81.26:0,81,1117	0/0:19,0:19:57.19:0,57,796	0/0:16,0:16:48.16:0,48,671	0/0:22,0:22:63.20:0,63,851	0/1:9,15:24:99:335,0,172	0/1:10,21:31:99:411,0,120	0/1:1,1:2:14.13:14,0,31
chr10	101029013	.	T	TTTC	5287.50	PASS	AB=0.653;AC=12;AF=0.214;AN=56;BaseQRankSum=15.342;DP=587;FS=1.598;HRun=0;HaplotypeScore=129.1070;InbreedingCoeff=0.1329;MQ=73.34;MQ0=1;MQRankSum=-13.776;QD=27.40;ReadPosRankSum=1.803;VQSLOD=5.0784;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.16:0,48,814	0/1:5,3:8:79.96:121,0,80	0/0:21,0:21:51.17:0,51,934	0/0:19,0:18:38.23:0,38,594	0/0:28,0:28:84.28:0,84,1388	0/0:32,0:32:96.31:0,96,1562	0/0:18,0:18:51.15:0,51,813	0/1:17,9:26:99:448,0,188	1/1:2,11:13:13.89:512,14,0	0/0:24,0:24:69.23:0,69,1170	0/0:22,0:22:66.20:0,66,1048	0/0:21,0:21:60.20:0,60,1014	0/0:24,0:24:72.22:0,72,1147	0/0:19,0:19:54.15:0,54,914	0/0:32,0:32:93.32:0,93,1577	1/1:4,17:21:9.41:776,9,0	0/0:23,0:23:69.21:0,69,1133	0/0:11,0:11:33.11:0,33,533	0/1:8,13:21:19.61:643,0,20	0/1:12,22:34:93.63:901,0,94	0/1:6,7:13:70.94:228,0,71	0/0:27,0:27:78.26:0,78,1321	0/0:19,0:19:57.18:0,57,939	0/0:16,0:16:48.16:0,48,814	0/0:22,0:22:66.17:0,66,1018	0/1:9,15:24:58.81:690,0,59	0/1:10,21:31:39.78:928,0,40	0/1:1,1:2:18.51:40,0,19
chr10	101029077	.	CA	C	6121.53	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=17.113;DP=585;FS=0.675;HRun=5;HaplotypeScore=84.8610;InbreedingCoeff=0.9951;MQ=85.06;MQ0=0;MQRankSum=-5.302;QD=30.46;ReadPosRankSum=-0.093;VQSLOD=5.0722;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.20:0,60,821	1/1:1,12:13:36.10:408,36,0	0/0:17,0:17:42.13:0,42,560	0/0:24,0:24:59.85:0,60,753	0/0:30,0:30:90.29:0,90,1216	0/0:28,0:28:81.27:0,81,1108	0/0:16,0:16:45.15:0,45,616	1/1:2,23:25:63.16:704,63,0	1/1:0,7:7:21.06:238,21,0	0/0:27,0:27:75.24:0,75,1010	0/0:22,0:22:66.22:0,66,903	0/0:16,0:16:48.11:0,48,620	0/0:20,0:20:57.19:0,57,780	0/0:12,0:12:33.06:0,33,415	0/0:29,0:29:84.27:0,84,1133	1/1:2,23:25:69.20:783,69,0	0/0:21,0:21:57.18:0,57,764	0/0:12,0:12:33.11:0,33,451	1/1:1,16:17:48.11:527,48,0	1/1:2,31:33:90.26:1021,90,0	1/1:1,21:22:63.18:712,63,0	0/0:24,0:24:69.21:0,69,912	0/0:28,0:28:84.28:0,84,1148	0/0:11,0:11:30.10:0,30,410	0/0:27,0:27:81.27:0,81,1108	1/1:2,18:20:16.44:572,16,0	1/1:3,31:34:87.25:986,87,0	1/1:0,5:5:15.04:170,15,0
chr10	101029183	.	A	AC	8053.74	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=7.852;DP=651;FS=0.994;HRun=3;HaplotypeScore=80.1770;InbreedingCoeff=0.9983;MQ=76.30;MQ0=0;MQRankSum=-1.289;QD=37.81;ReadPosRankSum=-0.263;VQSLOD=4.7998;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.25:0,81,971	1/1:1,17:18:39.13:546,39,0	0/0:15,0:15:24.04:0,24,403	0/0:12,0:12:26.64:0,27,283	0/0:34,0:34:96.28:0,96,1139	0/0:36,0:36:99:0,108,1295	0/0:19,0:19:54.17:0,54,647	1/1:0,27:27:81.24:1099,81,0	1/1:0,22:22:60.06:792,60,0	0/0:31,0:31:87.26:0,87,1036	0/0:30,0:30:84.23:0,84,985	0/0:24,0:24:69.16:0,69,781	0/0:24,0:24:69.19:0,69,816	0/0:18,0:18:54.12:0,54,621	0/0:38,0:38:99:0,105,1260	1/1:1,20:22:63.21:881,63,0	0/0:21,0:21:60.16:0,60,705	0/0:20,0:20:57.13:0,57,668	1/1:1,14:15:42.14:587,42,0	1/1:2,28:30:81.20:1101,81,0	1/1:1,25:26:69.23:966,69,0	0/0:26,0:26:78.24:0,78,935	0/0:23,0:23:66.20:0,66,792	0/0:22,0:22:63.16:0,63,730	0/0:18,0:18:54.14:0,54,624	1/1:0,16:16:48.07:612,48,0	1/1:1,30:31:87.29:1217,87,0	1/1:0,6:6:18.06:252,18,0
chr10	101030984	.	CA	C	3469.17	PASS	AB=0.944;AC=21;AF=0.375;AN=56;BaseQRankSum=12.000;DP=588;FS=4.438;HRun=9;HaplotypeScore=75.4363;InbreedingCoeff=0.8994;MQ=75.25;MQ0=0;MQRankSum=0.444;QD=20.29;ReadPosRankSum=1.264;VQSLOD=4.3646;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.73:0,91,1030	1/1:1,5:6:15.01:137,15,0	0/1:16,1:15:21.33:21,0,224	0/0:12,0:12:7.46:0,7,198	0/0:31,0:32:81.05:0,81,897	0/0:24,0:24:66.20:0,66,762	0/0:29,0:29:75.22:0,75,866	1/1:8,20:28:60.01:545,60,0	1/1:2,12:14:33.02:302,33,0	0/0:29,0:29:81.21:0,81,909	0/0:17,0:17:42.59:0,43,478	0/0:20,0:20:51.15:0,51,588	0/0:23,0:23:60.18:0,60,687	0/0:19,0:19:45.12:0,45,510	0/0:28,0:28:78.22:0,78,892	1/1:2,12:14:33.01:302,33,0	0/0:36,0:36:99:0,102,1155	0/0:14,0:14:36.11:0,36,414	1/1:4,5:9:15:137,15,0	1/1:2,21:23:63.03:577,63,0	1/1:0,13:13:39.02:357,39,0	0/0:31,0:31:84.24:0,84,958	0/0:26,0:26:66.19:0,66,756	0/0:23,0:23:63.19:0,63,727	0/0:22,0:22:60.17:0,60,684	1/1:3,21:24:31.42:542,31,0	1/1:0,19:19:51.03:467,51,0	1/1:0,4:4:9:82,9,0
chr10	101031109	.	TG	T	5989.40	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.570;DP=579;FS=15.701;HRun=4;HaplotypeScore=63.0594;InbreedingCoeff=0.9973;MQ=80.75;MQ0=0;MQRankSum=-4.230;QD=33.65;ReadPosRankSum=-0.405;VQSLOD=3.4347;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.15:0,45,630	1/1:0,11:11:30.09:360,30,0	0/0:21,0:21:57.15:0,57,747	0/0:9,0:9:26.95:0,27,328	0/0:31,0:31:84.27:0,84,1159	0/0:21,0:21:63.19:0,63,862	0/0:15,0:15:45.15:0,45,629	1/1:3,19:22:57.14:650,57,0	1/1:0,17:17:51.16:610,51,0	0/0:21,0:21:57.18:0,57,784	0/0:17,0:17:48.15:0,48,656	0/0:19,0:19:51.17:0,51,714	0/0:27,0:27:75.25:0,75,1047	0/0:22,0:22:63.19:0,63,861	0/0:21,0:21:63.20:0,63,865	1/1:1,19:20:54.17:646,54,0	0/0:21,0:21:63.21:0,63,882	0/0:26,0:26:78.25:0,78,1075	1/1:0,18:18:54.17:647,54,0	1/1:0,29:29:87.23:1028,87,0	1/1:1,11:12:33.10:396,33,0	0/0:33,0:33:93.31:0,93,1299	0/0:28,0:28:84.25:0,84,1141	0/0:14,0:14:39.10:0,39,510	0/0:39,0:39:99:0,116,1574	1/1:2,20:22:63.19:752,63,0	1/1:1,20:21:60.18:719,60,0	1/1:0,6:6:15.05:180,15,0
chr10	101031269	.	A	AGCTTAG	17899.94	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=17.175;DP=594;FS=1.839;HRun=0;HaplotypeScore=160.2306;InbreedingCoeff=0.9973;MQ=80.73;MQ0=0;MQRankSum=-19.010;QD=89.50;ReadPosRankSum=-1.323;VQSLOD=6.0595;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.16:0,48,1146	1/1:4,7:11:33.11:1151,33,0	0/0:15,0:15:45.02:0,45,956	0/0:25,0:26:69.24:0,69,1541	0/0:26,0:26:69.24:0,69,1641	0/0:28,0:28:84.27:0,84,1898	0/0:15,0:15:45.14:0,45,1031	1/1:17,11:28:83.94:2547,84,0	1/1:3,16:20:57.20:1984,57,0	0/0:32,0:32:84.28:0,84,1956	0/0:21,0:21:63.22:0,63,1477	0/0:17,0:17:51.18:0,51,1226	0/0:27,0:27:78.27:0,78,1848	0/0:17,0:17:51.16:0,51,1164	0/0:24,0:24:72.23:0,72,1679	1/1:5,16:21:57.20:1945,57,0	0/0:31,0:31:86.34:0,86,2114	0/0:14,0:14:39.13:0,39,915	1/1:12,8:20:54.19:1775,54,0	1/1:10,25:37:99:3184,102,0	1/1:7,4:11:23.99:503,24,0	0/0:29,0:29:87.28:0,87,1890	0/0:20,0:20:57.16:0,57,1221	0/0:19,0:19:57.20:0,57,1345	0/0:17,0:17:51.17:0,51,1163	1/1:7,14:21:60.21:2062,60,0	1/1:9,16:26:69.24:2392,69,0	1/1:4,1:5:15.01:356,15,0
chr10	101031617	.	A	AGG	11473.92	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-8.275;DP=654;FS=13.945;HRun=2;HaplotypeScore=74.0260;InbreedingCoeff=0.9954;MQ=89.61;MQ0=0;MQRankSum=-3.933;QD=50.10;ReadPosRankSum=-0.632;VQSLOD=3.2386;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.17:0,63,885	1/1:0,13:13:39.13:729,39,0	0/0:25,0:25:63.20:0,63,895	0/0:24,0:24:66.21:0,66,949	0/0:24,0:24:69.23:0,69,1016	0/0:23,0:23:69.23:0,69,1016	0/0:25,0:25:75.23:0,75,1082	1/1:3,31:34:93.31:1697,93,0	1/1:0,18:18:48.16:899,48,0	0/0:34,0:34:99:0,99,1456	0/0:23,0:23:66.22:0,66,968	0/0:17,0:17:51.17:0,51,751	0/0:24,0:24:66.20:0,66,951	0/0:29,0:29:84.27:0,84,1217	0/0:23,0:23:66.22:0,66,971	1/1:2,25:28:63.22:1180,63,0	0/0:28,0:28:84.27:0,84,1216	0/0:19,0:19:48.14:0,48,686	1/1:1,20:21:63.22:1179,63,0	1/1:0,23:23:66.23:1233,66,0	1/1:2,24:27:69.24:1287,69,0	0/0:24,0:24:66.20:0,66,950	0/0:24,0:24:63.14:0,63,845	0/0:16,0:16:48.16:0,48,704	0/0:21,0:21:63.21:0,63,928	1/1:1,26:27:37.08:1414,37,0	1/1:1,33:34:87.30:1629,87,0	1/1:0,4:4:12.04:225,12,0
chr10	101032191	.	CTCTCTCTCTCTCTCTCTATATATATATATATATATATATATATATATATATATA	C	683.03	PASS	AC=2;AF=0.042;AN=48;BaseQRankSum=0.959;DP=204;FS=8.466;HRun=0;HaplotypeScore=196.5643;InbreedingCoeff=0.3707;MQ=85.58;MQ0=13;MQRankSum=1.764;QD=97.58;ReadPosRankSum=0.329;VQSLOD=1.8518;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:21.07:0,21,1421	./.	0/0:24,0:8:16.30:0,16,653	0/0:45,0:22:17.07:0,17,808	0/0:7,0:7:18.06:0,18,946	./.	0/0:3,0:3:6:0,6,123	0/0:27,0:23:63.21:0,63,3594	0/0:5,0:5:9.03:0,9,520	0/0:8,0:8:21.07:0,21,1093	0/0:4,0:4:9.03:0,9,439	0/0:1,0:1:3.01:0,3,100	0/0:3,0:2:6.02:0,6,273	0/0:2,0:2:0.47:0,0,1	1/1:1,6:7:6.02:762,6,0	0/0:2,0:2:6.02:0,6,463	0/0:8,0:6:6.02:0,6,592	./.	0/0:4,0:2:6.02:0,6,465	0/0:8,0:8:15.05:0,15,1100	0/0:2,0:2:0:0,0,0	0/0:3,0:3:9.02:0,9,457	0/0:3,0:3:9.03:0,9,374	./.	0/0:6,0:6:3.01:0,3,100	0/0:6,0:6:18.05:0,18,1234	0/0:2,0:2:6.02:0,6,372	0/0:4,0:3:9.03:0,9,472
chr10	101032790	.	A	AC	836.94	PASS	AB=0.958;AC=11;AF=0.196;AN=56;BaseQRankSum=-0.684;DP=541;FS=5.166;HRun=0;HaplotypeScore=73.3955;InbreedingCoeff=-0.0360;MQ=66.20;MQ0=6;MQRankSum=-5.419;QD=4.78;ReadPosRankSum=4.045;VQSLOD=2.9675;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:31.88:0,32,216	1/1:0,8:8:5.91:48,6,0	0/0:40,0:16:5.50:0,6,154	0/0:28,0:10:14.99:0,15,111	0/0:19,0:19:56.47:0,56,500	0/0:18,0:18:48.02:0,48,454	0/0:11,0:11:29.42:0,29,249	0/1:34,0:32:99:175,0,255	0/1:11,0:10:58.47:66,0,58	0/0:27,0:27:75.02:0,75,717	0/0:12,0:12:34.75:0,35,275	0/0:21,0:21:53.90:0,54,463	0/0:19,0:19:53.23:0,53,476	0/0:12,0:12:23.11:0,23,187	0/0:21,0:21:60.03:0,60,560	0/1:13,1:12:34.14:73,0,34	0/0:29,0:29:79.94:0,80,758	0/0:23,0:22:56.24:0,56,460	0/1:19,2:20:76.35:76,0,114	0/1:20,1:21:54.72:117,0,55	0/1:5,1:5:7.02:69,0,7	0/0:12,0:12:33.51:0,34,330	0/0:20,0:20:59.51:0,60,610	0/0:18,0:18:50.40:0,50,464	0/0:21,0:21:59.41:0,59,567	0/1:28,1:27:99:159,0,151	0/1:22,0:21:99:130,0,103	0/1:9,0:9:34.80:73,0,35
chr10	101032800	.	AACCAGGG	A	2713.39	PASS	AB=0.911;AC=8;AF=0.143;AN=56;BaseQRankSum=7.285;DP=520;FS=8.303;HRun=0;HaplotypeScore=113.7129;InbreedingCoeff=-0.1471;MQ=68.75;MQ0=4;MQRankSum=-7.226;QD=16.96;ReadPosRankSum=2.146;VQSLOD=2.1289;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:50.35:0,50,1107	0/0:2,0:2:5.59:0,6,26	0/0:36,0:13:34.35:0,34,702	0/0:28,0:13:25.35:0,25,727	0/0:17,0:17:28.66:0,29,1184	0/0:16,0:16:36.07:0,36,1110	0/0:13,0:13:21.74:0,22,1114	0/1:31,1:30:53.54:593,0,54	0/1:8,0:7:9.55:297,0,10	0/0:21,0:21:47.46:0,47,1526	0/0:13,0:13:24.12:0,24,785	0/0:19,0:19:37.02:0,37,1104	0/0:19,0:19:47.90:0,48,1170	0/0:13,0:13:15.79:0,16,328	0/0:20,0:21:57.33:0,57,934	0/1:9,7:14:46.54:47,0,54	0/0:29,0:29:74.94:0,75,2406	0/0:21,0:20:39.53:0,40,1204	0/1:22,0:21:67.21:286,0,67	0/1:9,10:19:61.11:215,0,61	0/0:3,0:2:3.56:0,4,13	0/0:13,0:13:32.99:0,33,830	0/0:18,0:18:20.30:0,20,992	0/0:16,0:16:38.78:0,39,900	0/0:21,0:21:56.86:0,57,1599	0/1:30,1:29:65.98:832,0,66	0/1:23,0:22:70.47:408,0,70	0/1:9,0:9:28.90:172,0,29
chr10	101032801	.	ACCAGGG	A	2957.05	PASS	AC=16;AF=0.308;AN=52;BaseQRankSum=7.849;DP=457;FS=1.289;HRun=0;HaplotypeScore=92.1907;InbreedingCoeff=0.9370;MQ=72.27;MQ0=4;MQRankSum=-8.356;QD=26.64;ReadPosRankSum=2.191;VQSLOD=3.1182;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:39.13:0,39,1176	./.	0/0:34,0:13:33.11:0,33,706	0/0:27,0:13:23.70:0,24,706	0/0:18,0:18:39.13:0,39,1230	0/0:15,0:15:36.11:0,36,1067	0/0:13,0:13:33.11:0,33,1028	1/1:17,10:26:28.33:645,28,0	1/1:2,4:5:15.05:314,15,0	0/0:18,0:19:48.16:0,48,1427	0/0:12,0:12:24.08:0,24,750	0/0:17,0:17:33.11:0,33,1024	0/0:18,0:18:33.11:0,33,1015	0/0:12,0:12:9.03:0,9,287	0/0:17,0:20:42.13:0,42,768	1/1:12,0:10:3.01:65,3,0	0/0:29,0:29:69.71:0,70,2147	0/0:19,0:18:33.11:0,33,1046	1/1:9,6:14:18.06:327,18,0	1/1:13,0:13:12.04:245,12,0	./.	0/0:13,0:13:27.09:0,27,841	0/0:18,0:18:33.11:0,33,985	0/0:13,0:13:24.08:0,24,750	0/0:22,0:22:57.20:0,57,1744	1/1:9,13:20:42.14:905,42,0	1/1:2,10:12:21.07:453,21,0	1/1:1,3:4:9.03:195,9,0
chr10	101033840	.	ATT	A	3601.83	PASS	AB=0.556;AC=21;AF=0.375;AN=56;BaseQRankSum=6.208;DP=441;FS=0.410;HRun=13;HaplotypeScore=56.3635;InbreedingCoeff=0.9148;MQ=70.45;MQ0=0;MQRankSum=0.919;QD=20.70;ReadPosRankSum=3.457;VQSLOD=3.0258;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:10:24.04:233,24,0	1/1:1,9:10:27.03:262,27,0	0/0:12,0:8:14.45:0,14,143	0/0:6,0:6:6.01:0,6,71	0/0:26,0:26:58.06:0,58,788	0/0:20,0:20:45.13:0,45,617	0/0:6,0:6:15.04:0,15,199	1/1:4,19:23:57.03:541,57,0	1/1:2,14:16:36.05:349,36,0	0/0:15,0:16:29.57:0,30,363	0/0:17,0:19:53.64:0,54,699	0/0:17,0:17:43.31:0,43,474	0/0:14,0:15:28.06:0,28,302	0/0:12,0:16:33.07:0,33,423	0/0:21,0:21:54.12:0,54,680	1/1:3,7:11:23.76:215,24,0	0/0:11,0:12:29.54:0,30,343	0/0:21,0:21:48.01:0,48,570	1/1:4,7:11:14.87:188,15,0	1/1:2,17:19:48.05:466,48,0	1/1:3,5:8:15:145,15,0	0/0:12,0:15:26.53:0,27,332	0/0:18,0:19:48.16:0,48,675	0/0:7,0:7:18.03:0,18,225	0/0:18,0:17:39.09:0,39,493	1/1:8,23:31:28.58:619,29,0	1/1:7,18:25:41.98:407,42,0	0/1:2,7:10:5.14:177,0,5
chr10	101034206	.	T	TAA	3854.61	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.223;DP=600;FS=4.942;HRun=3;HaplotypeScore=74.7226;InbreedingCoeff=0.9792;MQ=85.13;MQ0=0;MQRankSum=-5.121;QD=41.90;ReadPosRankSum=2.216;VQSLOD=3.1788;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:11:30.03:480,30,0	0/0:12,0:12:36.12:0,36,504	0/0:21,0:21:44.28:0,44,594	0/0:17,0:17:41.82:0,42,516	0/0:50,0:50:99:0,141,1859	0/0:23,0:23:66.20:0,66,905	0/0:18,0:18:48.15:0,48,654	0/0:29,0:29:81.23:0,81,1058	0/0:24,0:24:66.20:0,66,905	0/0:23,0:23:69.23:0,69,965	0/0:25,0:25:66.20:0,66,905	1/1:3,10:13:27.09:494,27,0	0/0:21,0:21:57.12:0,57,711	0/0:15,0:15:45.14:0,45,612	0/0:25,0:25:75.20:0,75,980	0/0:24,0:24:69.19:0,69,913	0/0:18,0:18:54.13:0,54,714	0/0:5,0:5:12.04:0,12,168	0/0:23,0:23:66.19:0,66,876	0/0:25,0:25:75.22:0,75,1013	0/0:19,0:19:57.16:0,57,760	1/1:1,25:26:69.15:1192,69,0	1/1:0,17:17:45.07:753,45,0	1/1:1,24:25:51.17:935,51,0	0/0:25,0:25:72.20:0,72,969	0/0:25,0:25:72.22:0,72,962	0/0:38,0:38:99:0,111,1507	0/0:3,0:3:9.03:0,9,123
chr10	101034684	.	A	AGAAG	2861.04	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=4.247;DP=499;FS=2.510;HRun=0;HaplotypeScore=110.5704;InbreedingCoeff=0.6324;MQ=60.17;MQ0=2;MQRankSum=-6.105;QD=12.28;ReadPosRankSum=-0.297;VQSLOD=3.1608;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:18.05:0,18,259	0/1:12,0:12:51.23:93,0,51	0/0:13,0:11:11.99:0,12,123	0/0:16,0:14:5.75:0,6,44	0/0:17,0:17:42.08:0,42,564	0/0:24,0:24:54.14:0,54,789	0/0:22,0:22:35.06:0,35,465	1/1:25,0:23:35.59:250,36,0	1/1:26,0:26:50.50:465,51,0	0/0:29,0:29:54.12:0,54,717	0/0:19,0:19:33.05:0,33,464	1/1:3,0:3:5.88:35,6,0	0/0:17,0:17:26.21:0,26,255	0/0:24,0:24:54.07:0,54,674	0/0:22,0:22:39.06:0,39,403	1/1:14,0:14:32.75:300,33,0	0/0:23,0:23:60.06:0,60,797	0/0:13,0:13:21.03:0,21,291	1/1:13,0:12:6.29:122,6,0	0/1:23,0:22:35.99:180,0,36	1/1:19,0:19:32.95:332,33,0	1/1:10,1:11:17.56:194,18,0	1/1:15,3:18:35.22:364,35,0	1/1:2,0:2:3.48:36,3,0	0/0:18,0:18:42.07:0,42,542	1/1:27,0:27:52.60:422,53,0	0/1:33,0:31:99:229,0,127	0/1:7,0:7:27.27:46,0,27
chr10	101034704	.	GGAAA	G	250.53	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.263;DP=473;FS=7.085;HRun=0;HaplotypeScore=124.7326;InbreedingCoeff=0.5323;MQ=50.59;MQ0=5;MQRankSum=1.217;QD=11.39;ReadPosRankSum=2.678;VQSLOD=2.8280;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:24:0,24,376	0/0:14,0:14:12.25:0,12,103	0/0:9,0:8:4.99:0,5,25	0/0:10,0:5:3:0,3,25	0/0:16,0:16:33.09:0,33,709	0/0:23,0:23:60.17:0,60,1240	0/0:20,0:20:45.11:0,45,838	0/0:31,0:29:51.51:0,52,360	0/0:26,0:26:41.22:0,41,652	0/0:26,0:26:57.17:0,57,1130	0/0:12,0:12:27.09:0,27,601	0/0:2,0:2:3.01:0,3,53	0/0:15,0:15:27.06:0,27,467	0/0:25,0:25:45.08:0,45,871	1/1:8,14:22:19.71:342,20,0	0/0:15,0:15:23.01:0,23,252	0/0:25,0:25:19.02:0,19,1035	0/0:10,0:10:21:0,21,407	0/0:20,0:17:19.09:0,19,205	0/0:19,0:18:30.65:0,31,250	0/0:16,0:16:8.51:0,9,81	0/0:6,0:6:11.91:0,12,132	0/0:15,0:15:24:0,24,317	0/0:1,0:1:3.01:0,3,53	0/0:20,0:20:45.08:0,45,806	0/0:27,0:27:50.77:0,51,598	0/0:30,0:28:54.37:0,54,669	0/0:9,0:9:20.58:0,21,165
chr10	101034766	.	CTG	C	92.18	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=4.848;DP=558;FS=1.560;HRun=0;HaplotypeScore=132.8790;InbreedingCoeff=0.6298;MQ=57.11;MQ0=22;MQRankSum=-4.216;QD=1.04;ReadPosRankSum=-1.756;VQSLOD=1.7772;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:14.47:114,14,0	0/0:14,0:12:5.95:0,6,75	0/1:46,0:12:7.23:7,0,65	0/0:73,0:28:48.28:0,48,505	0/0:16,0:16:30.09:0,30,528	0/0:24,0:24:13.51:0,14,813	0/0:14,0:13:23.93:0,24,382	0/0:36,0:35:98.43:0,98,1309	0/0:18,0:18:8.93:0,9,100	0/0:26,0:26:38.09:0,38,1089	0/0:22,0:22:41.63:0,42,706	1/1:0,1:1:2.80:13,3,0	0/0:15,0:15:27.56:0,28,627	0/0:18,0:18:39.12:0,39,688	0/0:16,0:16:17.86:0,18,282	0/0:21,0:20:35.94:0,36,566	0/0:19,0:19:34.26:0,34,622	0/0:10,0:9:8.16:0,8,367	0/0:20,0:19:53.88:0,54,626	0/0:29,0:29:39.06:0,39,651	0/0:8,0:8:3:0,3,25	1/1:1,2:3:4.30:16,4,0	1/1:3,4:7:10.51:45,11,0	1/1:2,5:7:10.26:40,10,0	0/0:25,0:24:44.95:0,45,823	0/0:23,0:23:66.04:0,66,1059	0/0:21,0:20:18.73:0,19,523	0/1:17,0:17:11.16:11,0,416
chr10	101034772	.	CTCTCTG	C	233.46	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=6.182;DP=537;FS=1.696;HRun=0;HaplotypeScore=156.0193;InbreedingCoeff=0.6460;MQ=54.22;MQ0=26;MQRankSum=-4.066;QD=2.88;ReadPosRankSum=-2.400;VQSLOD=1.6913;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:8.82:58,9,0	0/0:15,0:13:2.99:0,3,24	0/1:38,0:6:0.03:0,0,16	0/0:66,0:27:16.18:0,16,204	0/0:16,0:16:24.08:0,24,597	0/0:24,0:24:6.89:0,7,1070	0/0:15,0:13:17.91:0,18,407	0/0:35,0:34:85.31:0,85,898	0/0:19,0:18:5.95:0,6,43	0/0:28,0:28:77.22:0,77,1657	0/0:20,0:20:32.57:0,33,804	1/1:0,1:1:3.01:32,3,0	0/0:14,0:14:26.40:0,26,685	0/0:16,0:16:36.07:0,36,829	0/0:18,0:18:6.09:0,6,276	0/0:20,0:19:35.79:0,36,488	0/0:19,0:19:39.48:0,39,949	0/0:10,0:8:20.96:0,21,577	0/0:18,0:17:35.73:0,36,464	0/0:27,0:26:31.96:0,32,255	0/0:8,0:8:3.01:0,3,54	1/1:1,2:3:5.96:49,6,0	1/1:2,4:6:11.99:112,12,0	1/1:2,5:7:14.95:130,15,0	0/0:22,0:21:42.02:0,42,1039	0/0:25,0:24:47.41:0,47,645	0/0:21,0:20:17.62:0,18,228	0/1:17,0:17:5:5,0,292
chr10	101034786	.	C	CTG	1540	PASS	AB=0.885;AC=16;AF=0.308;AN=52;BaseQRankSum=7.424;DP=481;FS=7.906;HRun=0;HaplotypeScore=116.0662;InbreedingCoeff=0.5483;MQ=46.08;MQ0=24;MQRankSum=-3.230;QD=6.39;ReadPosRankSum=3.321;VQSLOD=2.8394;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:0.47:0,0,1	./.	./.	0/1:39,0:6:14.55:15,0,16	0/0:18,0:18:24.01:0,24,275	0/0:25,0:25:54.01:0,54,630	0/0:14,0:12:15.47:0,15,203	1/1:28,0:25:32.47:390,32,0	0/1:7,15:21:8.06:48,0,8	0/0:24,0:24:72.10:0,72,909	0/0:19,0:19:30.03:0,30,349	0/0:1,0:1:2.88:0,3,15	0/0:11,0:11:32.86:0,33,408	0/0:14,0:14:26.85:0,27,352	0/0:21,0:21:15.03:0,15,76	1/1:22,1:22:17.27:211,17,0	0/0:19,0:19:46.99:0,47,553	0/0:9,0:7:20.99:0,21,273	0/1:16,1:14:39.70:139,0,40	1/1:30,0:29:29.78:232,30,0	1/1:15,0:14:2.84:14,3,0	0/0:2,0:2:5.83:0,6,33	0/0:4,0:4:11.56:0,12,63	0/0:5,0:5:13.66:0,14,73	0/0:24,0:23:38.70:0,39,490	1/1:26,0:25:20.05:357,20,0	1/1:20,0:19:19.64:193,20,0	0/1:21,0:21:61.16:119,0,61
chr10	101034793	.	TCC	T	1878.80	PASS	AB=1.000;AC=30;AF=0.577;AN=52;BaseQRankSum=8.180;DP=422;FS=15.782;HRun=3;HaplotypeScore=102.2718;InbreedingCoeff=0.5787;MQ=42.70;MQ0=26;MQRankSum=-0.681;QD=6.81;ReadPosRankSum=2.307;VQSLOD=-0.6422;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:0.83:0,1,2	./.	./.	0/1:22,0:1:0:0,0,0	0/0:16,0:16:12:0,12,132	0/1:21,0:21:31.43:31,0,479	0/0:18,0:15:5.76:0,6,278	1/1:4,0:19:36.28:272,36,0	1/1:21,0:20:14.10:89,14,0	0/0:23,0:22:53.75:0,54,717	0/0:15,0:15:22.49:0,22,272	1/1:1,0:1:0.89:2,1,0	0/0:10,0:10:14.83:0,15,336	0/0:14,0:13:13.34:0,13,333	1/1:10,9:19:17.81:252,18,0	1/1:21,1:21:14.90:155,15,0	0/1:17,0:17:38.75:39,0,420	0/0:10,0:8:16.32:0,16,288	0/1:14,0:11:3.17:55,0,3	1/1:29,1:29:38.87:311,39,0	1/1:2,13:14:3:43,3,0	1/1:2,0:2:1.36:3,1,0	1/1:4,0:4:2.90:7,3,0	1/1:6,0:5:2.33:6,2,0	0/0:21,0:20:28.20:0,28,433	1/1:22,0:22:48.38:394,48,0	1/1:19,0:18:29.43:210,29,0	1/1:18,0:18:25.03:183,25,0
chr10	101035412	.	T	TAATTGTAATAATC	32871.36	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-3.053;DP=601;FS=13.033;HRun=0;HaplotypeScore=187.6001;InbreedingCoeff=0.9716;MQ=67.32;MQ0=0;MQRankSum=-16.045;QD=95.00;ReadPosRankSum=-2.184;VQSLOD=3.5014;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,5:11:18.02:759,18,0	1/1:3,8:11:27.09:1493,27,0	0/0:15,0:15:33.11:0,33,953	0/0:8,0:8:15.03:0,15,341	0/0:25,0:25:60.21:0,60,2121	0/0:24,0:23:63.20:0,63,2260	0/0:8,0:8:21.07:0,21,677	1/1:51,0:51:90.31:3936,90,0	1/1:10,15:27:45.15:2407,45,0	0/0:24,0:24:54.19:0,54,1876	0/0:29,0:29:72.25:0,72,2665	1/1:8,17:28:60.21:3441,60,0	0/0:29,0:29:75.26:0,75,2689	0/0:14,0:14:30.10:0,30,1076	0/0:22,0:22:48.16:0,48,1749	1/1:13,12:28:63.22:3243,63,0	0/0:18,0:18:29.30:0,29,1283	0/0:8,0:8:18.06:0,18,667	1/1:8,3:12:24.08:973,24,0	1/1:15,18:37:69.24:3565,69,0	1/1:7,0:7:12.04:629,12,0	1/1:8,13:22:30.10:1661,30,0	1/1:14,18:32:57.20:3115,57,0	1/1:4,5:11:12.04:614,12,0	0/0:30,0:31:78.24:0,78,2557	1/1:11,15:29:63.20:3409,63,0	1/1:13,20:35:57.16:3241,57,0	1/1:2,2:4:6.02:384,6,0
chr10	101035425	.	C	CAA	1863.55	PASS	AB=0.972;AC=14;AF=0.250;AN=56;BaseQRankSum=15.599;DP=511;FS=4.142;HRun=0;HaplotypeScore=121.8928;InbreedingCoeff=-0.3348;MQ=75.52;MQ0=0;MQRankSum=-13.227;QD=7.51;ReadPosRankSum=6.158;VQSLOD=2.8200;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:7:43.42:43,0,129	0/1:10,0:10:99:113,0,116	0/0:18,0:18:51.15:0,51,766	0/0:10,0:10:27.09:0,27,424	0/0:27,0:27:81.28:0,81,1321	0/0:23,0:22:69.22:0,69,1095	0/0:9,0:9:27.09:0,27,441	0/1:21,11:32:99:384,0,894	0/1:23,0:23:87.05:87,0,529	0/0:22,0:22:66.23:0,66,1076	0/0:31,0:31:87.28:0,87,1395	0/1:24,0:24:99:243,0,164	0/0:26,0:26:78.27:0,78,1271	0/0:12,0:12:36.12:0,36,587	0/0:20,0:20:60.20:0,60,979	0/1:22,0:22:99:195,0,194	0/0:15,0:15:42.11:0,42,653	0/0:8,0:8:18.06:0,18,294	0/0:12,0:12:15.53:0,16,488	0/1:27,0:27:99:280,0,555	0/1:5,1:6:39.02:39,0,152	0/1:16,0:16:99:119,0,251	0/1:25,0:25:99:153,0,609	0/1:8,0:8:38.94:44,0,39	0/0:30,0:30:87.28:0,87,1367	0/1:23,0:23:99:136,0,541	0/1:21,0:21:99:154,0,313	0/1:4,0:4:29:29,0,86
chr10	101035865	.	TAC	T	4743.80	PASS	AB=0.718;AC=29;AF=0.518;AN=56;BaseQRankSum=12.899;DP=388;FS=7.163;HRun=0;HaplotypeScore=69.4230;InbreedingCoeff=0.7427;MQ=61.62;MQ0=7;MQRankSum=-1.151;QD=24.97;ReadPosRankSum=-0.877;VQSLOD=4.7275;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,12:21:0.83:262,0,1	1/1:0,6:6:9.03:137,9,0	0/1:14,0:6:1.32:1,0,180	0/0:21,0:10:1.64:0,2,218	0/0:19,0:19:54.14:0,54,942	0/0:22,0:22:63.20:0,63,1179	0/0:8,0:8:24.08:0,24,434	1/1:1,36:37:99:1440,111,0	1/1:0,10:10:18.06:275,18,0	0/0:14,0:14:42.13:0,42,696	0/0:18,0:18:54.14:0,54,942	1/1:1,8:9:6.02:91,6,0	0/0:22,0:22:63.17:0,63,1070	0/0:10,0:10:24.06:0,24,429	0/0:19,0:19:57.14:0,57,912	1/1:0,12:12:20.93:265,21,0	0/0:13,0:13:36.08:0,36,604	0/0:17,0:17:48.12:0,48,846	1/1:0,13:13:39.12:569,39,0	1/1:2,10:12:26.88:309,27,0	1/1:1,4:5:3.01:45,3,0	1/1:0,4:4:5.95:64,6,0	1/1:0,7:7:14.96:193,15,0	1/1:2,3:4:9.03:137,9,0	0/0:15,0:15:45.15:0,45,829	0/1:1,13:14:15.84:529,0,16	1/1:1,13:12:18.06:269,18,0	1/1:0,6:6:11.99:157,12,0
chr10	101035880	.	CAT	C	253	PASS	AB=0.967;AC=4;AF=0.071;AN=56;BaseQRankSum=4.126;DP=357;FS=9.257;HRun=0;HaplotypeScore=75.4571;InbreedingCoeff=0.3066;MQ=69.07;MQ0=5;MQRankSum=-1.484;QD=5.88;ReadPosRankSum=-3.274;VQSLOD=1.0549;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,14:19:29.84:341,30,0	0/0:6,0:6:9.03:0,9,150	0/1:10,0:4:12.89:13,0,44	0/0:22,0:12:7.18:0,7,111	0/0:18,0:18:51.17:0,51,843	0/0:20,0:20:57.19:0,57,945	0/0:6,0:6:12.04:0,12,201	0/0:39,0:39:61.55:0,62,1331	0/0:10,0:10:27.09:0,27,448	0/0:14,0:14:36.12:0,36,580	0/0:17,0:17:39.13:0,39,653	0/0:5,0:5:9.03:0,9,138	0/0:19,1:20:19.02:0,19,855	0/0:10,0:10:27.09:0,27,448	0/0:14,0:14:36.12:0,36,602	0/0:9,0:9:15.02:0,15,200	0/0:13,0:13:36.12:0,36,602	0/0:17,0:17:36.12:0,36,598	0/1:13,1:14:8.02:8,0,422	0/0:9,0:9:18.06:0,18,301	0/0:1,0:1:3.01:0,3,50	0/0:1,0:1:3.01:0,3,46	0/0:7,0:7:9.03:0,9,139	0/0:5,0:4:6.02:0,6,89	0/0:20,0:20:60.19:0,60,952	0/0:12,0:12:33.11:0,33,552	0/0:14,0:12:27.09:0,27,434	0/0:5,0:5:12.04:0,12,201
chr10	101036893	.	G	GA	286.28	PASS	AC=2;AF=0.042;AN=48;BaseQRankSum=2.760;DP=409;FS=14.297;HRun=8;HaplotypeScore=108.1945;InbreedingCoeff=0.8739;MQ=85.04;MQ0=0;MQRankSum=-0.251;QD=26.03;ReadPosRankSum=1.009;VQSLOD=2.4317;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:33.10:379,33,0	0/0:9,0:9:27.02:0,27,249	0/0:14,0:14:23.28:0,23,216	0/0:19,0:18:26.15:0,26,261	0/0:18,0:18:44.97:0,45,403	0/0:24,0:23:63.02:0,63,575	0/0:14,0:14:39:0,39,352	0/0:28,0:27:69.04:0,69,631	0/0:16,0:16:36.02:0,36,329	0/0:18,0:18:47.97:0,48,431	0/0:16,0:16:38.98:0,39,348	./.	0/0:16,0:16:42:0,42,379	0/0:17,0:17:38.99:0,39,350	0/0:29,0:29:77.99:0,78,702	0/0:13,0:13:32.94:0,33,288	0/0:24,0:24:60.02:0,60,549	0/0:22,0:22:60.02:0,60,549	0/0:6,0:6:15.01:0,15,137	0/0:25,0:25:53.93:0,54,483	0/0:2,0:2:6:0,6,55	./.	./.	./.	0/0:19,0:19:35.99:0,36,329	0/0:20,0:20:41.95:0,42,380	0/0:23,0:23:53.96:0,54,480	0/0:6,0:6:15.01:0,15,137
chr10	101036954	.	A	ATT	5609.98	PASS	AC=22;AF=0.458;AN=48;BaseQRankSum=13.996;DP=397;FS=30.918;HRun=3;HaplotypeScore=94.2485;InbreedingCoeff=0.9544;MQ=74.92;MQ0=0;MQRankSum=-14.027;QD=38.16;ReadPosRankSum=-1.384;VQSLOD=2.8596;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,5:7:15.01:218,15,0	1/1:3,5:9:21.07:344,21,0	0/0:10,0:10:24.08:0,24,322	0/0:13,0:13:29.52:0,30,360	0/0:24,0:24:66.22:0,66,919	0/0:20,0:19:57.19:0,57,797	0/0:10,0:10:27.09:0,27,371	1/1:10,15:25:54.14:893,54,0	1/1:5,5:10:16.82:268,17,0	0/0:21,0:21:63.20:0,63,852	0/0:22,0:22:66.21:0,66,905	./.	0/0:15,0:15:39.11:0,39,526	0/0:16,0:16:45.14:0,45,610	0/0:33,0:33:96.31:0,96,1325	1/1:0,11:11:24.08:424,24,0	0/0:23,0:23:66.22:0,66,921	0/0:18,0:18:42.14:0,42,585	1/1:1,7:8:18.06:317,18,0	1/1:2,23:28:75.58:1215,76,0	1/1:0,1:1:3.01:53,3,0	./.	./.	./.	0/0:25,0:25:69.22:0,69,949	1/1:7,17:25:9.18:791,9,0	1/1:3,14:17:46.04:781,46,0	1/1:0,5:6:18.06:306,18,0
chr10	101036992	.	TA	T	122.98	PASS	AC=2;AF=0.042;AN=48;BaseQRankSum=3.570;DP=439;FS=1.526;HRun=7;HaplotypeScore=91.7875;InbreedingCoeff=0.9639;MQ=74.49;MQ0=0;MQRankSum=-2.319;QD=15.37;ReadPosRankSum=-0.333;VQSLOD=3.5475;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,7:8:21.05:214,21,0	0/0:7,0:7:18.06:0,18,226	0/0:15,0:15:26.69:0,27,398	0/0:8,0:8:14.53:0,15,157	0/0:23,0:23:69.17:0,69,818	0/0:24,0:23:69.22:0,69,868	0/0:11,0:11:33.11:0,33,413	0/0:32,0:32:78.24:0,78,970	0/0:10,0:10:27.09:0,27,340	0/0:29,0:29:81.26:0,81,1019	0/0:31,0:31:87.28:0,87,1094	./.	0/0:17,0:17:51.16:0,51,641	0/0:13,0:13:33.11:0,33,415	0/0:30,0:30:81.25:0,81,1007	0/0:14,0:14:36.12:0,36,452	0/0:25,0:25:72.23:0,72,902	0/0:19,0:19:57.18:0,57,716	0/0:11,0:11:33.11:0,33,415	0/0:27,0:27:72.19:0,72,883	0/0:8,0:8:21.04:0,21,237	./.	./.	./.	0/0:24,0:24:72.22:0,72,895	0/0:21,0:21:51.16:0,51,631	0/0:20,0:20:54.17:0,54,678	0/0:12,0:11:36.12:0,36,453
chr10	101037494	.	A	AGAGGTG	19632.33	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.494;DP=649;FS=21.743;HRun=0;HaplotypeScore=162.1582;InbreedingCoeff=0.9948;MQ=82.95;MQ0=0;MQRankSum=-18.880;QD=87.64;ReadPosRankSum=-4.370;VQSLOD=3.1814;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,151,3438	1/1:4,8:12:36.12:1215,36,0	0/0:20,0:20:54.15:0,54,1099	0/0:27,0:27:77.99:0,78,1497	0/0:25,0:25:72.23:0,72,1662	0/0:18,0:18:51.16:0,51,1179	0/0:18,0:18:54.17:0,54,1212	1/1:21,14:35:99:3239,105,0	1/1:8,24:34:90.31:3199,90,0	0/0:26,0:26:72.25:0,72,1716	0/0:14,0:14:42.14:0,42,1010	0/0:21,0:21:63.22:0,63,1446	0/0:25,0:25:75.26:0,75,1738	0/0:25,0:25:72.21:0,72,1551	0/0:23,0:23:69.22:0,69,1611	1/1:6,14:22:57.17:1996,57,0	0/0:34,0:34:93.32:0,93,2207	0/0:28,0:28:84.29:0,84,1993	1/1:9,8:19:57.17:1814,57,0	1/1:9,12:23:54.18:1912,54,0	1/1:9,8:18:30.10:1004,30,0	0/0:14,0:14:42.14:0,42,974	0/0:12,0:12:27.09:0,27,597	0/0:23,0:23:63.22:0,63,1492	0/0:20,0:20:54.17:0,54,1253	1/1:8,18:26:23.61:2362,24,0	1/1:6,17:30:69.24:2463,69,0	1/1:4,0:4:12.04:428,12,0
chr10	101037998	.	C	CTTCTCTGT	14158.43	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=17.014;DP=808;FS=1.928;HRun=0;HaplotypeScore=313.1873;InbreedingCoeff=0.6235;MQ=59.87;MQ0=0;MQRankSum=-13.249;QD=33.08;ReadPosRankSum=-2.407;VQSLOD=3.8970;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:99:505,0,134	1/1:8,1:9:26.70:254,27,0	0/0:37,0:37:89.72:0,90,1805	0/0:42,0:39:79.46:0,79,1870	0/0:29,0:29:87.13:0,87,1775	0/0:21,0:21:53.17:0,53,1350	0/0:18,0:18:51.14:0,51,1225	1/1:40,0:39:99:1602,102,0	1/1:18,2:20:56.75:930,57,0	0/0:35,0:35:99:0,102,2349	0/0:23,0:23:69.21:0,69,1709	0/1:28,0:28:99:826,0,170	0/0:27,0:27:78.18:0,78,1843	0/0:34,0:34:96.26:0,96,2426	0/0:53,0:53:99:0,144,3755	1/1:39,2:41:99:1800,123,0	0/0:22,0:22:63.11:0,63,1589	0/0:18,0:17:51.06:0,51,1189	1/1:20,2:22:62.92:1168,63,0	1/1:24,3:28:70.37:844,70,0	1/1:19,2:21:37.78:274,38,0	0/1:41,0:41:99:722,0,272	0/1:30,0:30:99:597,0,226	0/1:24,0:24:99:159,0,116	0/0:17,0:17:45.11:0,45,1098	1/1:42,2:44:74.15:2860,74,0	1/1:39,1:40:99:1502,119,0	1/1:2,0:2:6.01:115,6,0
chr10	101038007	.	A	ATCTCTGTT	16453.71	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=16.806;DP=832;FS=0.916;HRun=0;HaplotypeScore=334.5393;InbreedingCoeff=0.9740;MQ=53.89;MQ0=2;MQRankSum=-18.462;QD=37.14;ReadPosRankSum=-6.093;VQSLOD=2.8405;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:33,11:47:89.31:1362,89,0	1/1:9,0:9:16.79:213,17,0	0/0:33,0:30:74.38:0,74,1209	0/0:43,0:33:74.65:0,75,1383	0/0:31,0:31:74.58:0,75,1430	0/0:20,0:20:47.20:0,47,1245	0/0:21,0:21:57.11:0,57,1198	1/1:45,0:44:78.56:1319,79,0	1/1:26,0:26:51.71:798,52,0	0/0:35,0:35:87.26:0,87,1946	0/0:27,0:27:75.15:0,75,1545	1/1:20,8:28:68.79:1490,69,0	0/0:27,0:27:80.90:0,81,1737	0/0:33,0:33:93.09:0,93,2126	0/0:54,0:54:99:0,144,3463	1/1:38,0:38:99:1593,102,0	0/0:22,0:22:54.18:0,54,1393	0/0:22,0:21:48.12:0,48,1096	1/1:23,0:23:50.64:1138,51,0	1/1:33,0:33:58.97:715,59,0	1/1:22,0:22:23.14:147,23,0	1/1:27,14:42:95.65:1803,96,0	1/1:19,7:26:70.66:1393,71,0	1/1:11,11:22:27.69:430,28,0	0/0:21,0:21:38.01:0,38,912	1/1:40,0:41:26.40:2654,26,0	1/1:37,0:37:88.76:1310,89,0	1/1:4,0:4:3.01:90,3,0
chr10	101038013	.	G	GTT	4714.18	PASS	AB=0.960;AC=16;AF=0.286;AN=56;BaseQRankSum=12.985;DP=833;FS=3.816;HRun=1;HaplotypeScore=287.8161;InbreedingCoeff=-0.1601;MQ=51.02;MQ0=2;MQRankSum=-12.973;QD=10.81;ReadPosRankSum=-2.560;VQSLOD=0.4902;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:44,4:48:99:417,0,286	0/1:10,0:10:44.74:45,0,74	0/0:32,0:28:80.43:0,80,1048	0/0:45,0:32:85.86:0,86,1190	0/0:31,0:31:75.22:0,75,1100	0/0:21,0:21:51.35:0,51,841	0/0:21,0:21:57.18:0,57,851	0/1:41,2:42:99:365,0,555	0/1:25,0:25:99:180,0,139	0/0:36,0:36:99:0,102,1487	0/0:28,0:28:81.23:0,81,1170	0/1:26,1:27:99:317,0,270	0/0:30,0:30:84.26:0,84,1242	0/0:31,0:31:93.29:0,93,1377	0/0:55,0:55:99:0,153,2314	0/1:33,3:36:12.69:560,0,13	0/0:23,1:24:53.84:0,54,900	0/0:22,0:21:44.64:0,45,780	0/1:21,2:23:99:330,0,220	0/1:31,1:32:32.37:225,0,32	0/1:19,1:21:8.23:107,0,8	0/1:38,0:38:99:516,0,192	0/1:25,2:27:50.30:442,0,50	1/1:23,0:23:9.75:182,10,0	0/0:21,0:21:54.15:0,54,779	0/1:42,3:45:99:607,0,295	0/1:35,0:35:99:411,0,152	0/1:3,0:3:1.47:10,0,1
chr10	101038016	.	TCTGTG	T	950.40	PASS	AB=0.909;AC=13;AF=0.232;AN=56;BaseQRankSum=9.224;DP=845;FS=5.952;HRun=0;HaplotypeScore=341.1816;InbreedingCoeff=-0.2669;MQ=51.13;MQ0=2;MQRankSum=-6.245;QD=2.38;ReadPosRankSum=1.581;VQSLOD=0.9204;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:46,2:48:40.45:40,0,1109	0/0:8,2:10:1.32:0,1,95	0/0:31,0:26:60.15:0,60,1834	0/0:47,0:33:86.31:0,86,2162	0/0:30,0:30:84.29:0,84,2390	0/0:23,0:23:66.70:0,67,1933	0/0:20,0:20:57.03:0,57,1733	0/1:42,1:42:58.94:59,0,652	0/1:24,1:25:9.60:10,0,249	0/0:36,0:36:99:0,105,3093	0/0:28,0:28:81.28:0,81,2367	0/0:28,1:29:19.57:0,20,1315	0/0:31,0:31:93.32:0,93,2748	0/0:33,0:33:99:0,99,2953	0/0:57,0:57:99:0,157,4947	0/1:27,8:35:99:220,0,112	0/0:24,0:24:57.88:0,58,1907	0/0:24,0:23:59.73:0,60,1802	0/1:20,2:22:94.50:94,0,361	0/1:29,4:33:14.72:15,0,190	0/1:22,2:24:14.12:14,0,16	0/1:35,1:36:69.22:69,0,956	0/1:22,3:25:52.96:53,0,477	0/1:24,0:24:4.61:5,0,113	0/0:22,0:22:60.20:0,60,1720	0/1:43,5:48:99:381,0,566	0/1:28,6:34:99:100,0,343	0/1:2,1:3:6.25:40,0,6
chr10	101038017	.	CTG	C	720.43	PASS	AB=0.803;AC=11;AF=0.196;AN=56;BaseQRankSum=8.785;DP=848;FS=8.720;HRun=0;HaplotypeScore=306.6561;InbreedingCoeff=0.0116;MQ=50.26;MQ0=2;MQRankSum=-10.681;QD=2.62;ReadPosRankSum=-3.014;VQSLOD=0.4477;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:54.42:0,54,864	0/1:6,4:10:39.78:65,0,40	0/0:30,0:25:63.18:0,63,1027	0/0:48,0:33:79.69:0,80,1187	0/0:30,0:30:78.22:0,78,1297	0/0:24,0:24:64.30:0,64,1068	0/0:20,0:20:53.96:0,54,956	0/1:36,7:42:99:123,0,754	0/1:19,6:25:88:88,0,115	0/0:36,0:36:99:0,99,1739	0/0:28,0:28:72.20:0,72,1226	0/0:29,0:29:64.11:0,64,931	0/0:32,0:32:96.28:0,96,1638	0/0:34,0:34:93.25:0,93,1601	0/0:57,0:57:99:0,157,2783	0/1:30,4:34:42.35:42,0,106	0/0:25,0:25:60.05:0,60,1080	0/0:25,0:24:53.41:0,53,1002	0/1:16,6:22:99:136,0,214	0/1:19,13:33:6.87:7,0,139	0/1:18,6:24:2.18:5,0,2	0/0:35,0:35:43.80:0,44,816	0/0:25,0:25:35.07:0,35,507	0/0:26,0:26:10.40:0,10,145	0/0:21,0:21:54.06:0,54,918	0/1:39,9:48:99:217,0,450	0/1:26,7:33:99:143,0,114	1/1:1,2:3:5.68:39,6,0
chr10	101038023	.	C	CTG	1928.62	PASS	AB=0.980;AC=11;AF=0.196;AN=56;BaseQRankSum=10.447;DP=867;FS=5.867;HRun=0;HaplotypeScore=311.4592;InbreedingCoeff=-0.0720;MQ=47.41;MQ0=6;MQRankSum=-11.462;QD=6.77;ReadPosRankSum=-3.237;VQSLOD=2.2073;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:47.38:0,47,673	0/1:10,0:10:16.37:130,0,16	0/0:33,0:21:60.07:0,60,797	0/0:53,0:32:75.17:0,75,1126	0/0:30,0:30:75.24:0,75,1123	0/0:25,0:25:67.59:0,68,1028	0/0:19,0:19:51.17:0,51,781	0/1:43,0:42:99:217,0,607	0/1:26,1:27:34.52:253,0,35	0/0:36,0:36:96.32:0,96,1446	0/0:26,0:26:69.23:0,69,1049	0/0:31,0:31:45.05:0,45,706	0/0:33,0:33:99:0,99,1488	0/0:33,0:33:99:0,99,1503	0/0:58,0:58:99:0,159,2385	0/1:35,1:36:95.11:203,0,95	0/0:25,0:25:63.21:0,63,960	0/0:23,0:22:52.88:0,53,899	0/1:21,1:21:99:234,0,162	0/1:33,0:33:43.59:144,0,44	1/1:25,0:25:2.67:20,3,0	0/0:34,0:34:56.97:0,57,668	0/0:25,0:24:34.26:0,34,377	0/0:27,0:27:11.74:0,12,108	0/0:21,0:21:54.18:0,54,826	0/1:53,1:54:99:489,0,375	0/1:30,2:32:59.29:376,0,59	0/1:3,0:3:8.12:8,0,14
chr10	101038025	.	CTG	C	1566.48	PASS	AB=0.774;AC=12;AF=0.214;AN=56;BaseQRankSum=7.569;DP=869;FS=17.065;HRun=0;HaplotypeScore=311.1229;InbreedingCoeff=0.0243;MQ=47.20;MQ0=6;MQRankSum=-6.871;QD=5.48;ReadPosRankSum=-5.157;VQSLOD=1.1549;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:53.32:0,53,976	0/1:7,4:11:32.81:100,0,33	0/0:31,0:18:48:0,48,820	0/0:49,0:29:74.59:0,75,1210	0/0:28,0:28:72.25:0,72,1378	0/0:27,0:27:66.67:0,67,1289	0/0:22,0:22:62.94:0,63,1068	0/1:31,10:40:99:285,0,828	0/1:19,8:27:99:224,0,175	0/0:34,0:34:99:0,99,1745	0/0:25,0:25:71.90:0,72,1288	0/0:31,0:31:72.16:0,72,1204	0/0:33,0:33:99:0,99,1801	0/0:33,0:33:99:0,99,1824	0/0:58,0:58:99:0,159,2940	0/1:31,5:36:99:121,0,231	0/0:27,0:27:66.80:0,67,1201	0/0:23,0:22:59.69:0,60,1114	0/1:13,8:20:99:146,0,232	0/1:19,14:33:6.71:7,0,198	1/1:16,9:25:3.03:31,3,0	0/0:33,0:33:56.39:0,56,979	0/0:27,0:26:38.37:0,38,658	0/0:26,0:26:8.36:0,8,166	0/0:22,0:22:63.04:0,63,1068	0/1:39,15:54:99:540,0,848	0/1:26,9:35:99:217,0,226	1/1:1,2:3:0.97:43,1,0
chr10	101038027	.	G	GTCTCTGTCTC	10737.40	PASS	AB=0.985;AC=22;AF=0.393;AN=56;BaseQRankSum=12.217;DP=874;FS=0.701;HRun=0;HaplotypeScore=387.8750;InbreedingCoeff=0.4754;MQ=46.95;MQ0=7;MQRankSum=-14.058;QD=23.60;ReadPosRankSum=-0.101;VQSLOD=2.1282;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:51,0:52:2.09:2,0,863	1/1:8,2:10:16.54:576,17,0	0/0:34,0:18:29.96:0,30,567	0/0:52,0:28:29.28:0,29,1020	0/0:28,0:28:62.88:0,63,1784	0/0:27,0:27:25.15:0,25,1834	0/0:22,0:22:51.10:0,51,1230	1/1:39,0:38:55.67:1490,56,0	1/1:25,2:27:40.46:1203,40,0	0/0:34,0:34:84.25:0,84,2245	0/0:25,0:25:66.21:0,66,1771	0/1:31,0:31:10.24:10,0,1048	0/0:32,0:32:84.29:0,84,2434	0/0:33,0:33:90.30:0,90,2482	0/0:58,0:58:99:0,135,3614	0/1:35,1:36:1.71:911,0,2	0/0:28,0:28:27.23:0,27,1714	0/0:23,0:22:47.41:0,47,1542	1/1:21,1:21:20.80:961,21,0	1/1:35,0:35:23.87:948,24,0	0/1:24,1:25:2.07:125,0,2	0/1:33,0:33:27.91:28,0,714	0/1:27,0:26:62.26:62,0,291	0/1:27,0:27:19.40:19,0,83	0/0:23,0:23:57.05:0,57,1363	0/1:52,2:54:38.64:2568,0,39	1/1:31,2:34:46.80:1723,47,0	1/1:3,0:3:5.05:110,5,0
chr10	101038051	.	TTC	T	5901.74	PASS	AB=0.660;AC=20;AF=0.357;AN=56;BaseQRankSum=13.280;DP=907;FS=12.791;HRun=0;HaplotypeScore=283.3416;InbreedingCoeff=0.4532;MQ=48.72;MQ0=16;MQRankSum=-10.013;QD=13.60;ReadPosRankSum=0.757;VQSLOD=3.0333;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:49,0:49:32.72:240,33,0	1/1:4,9:13:6.19:257,6,0	0/0:49,0:23:42.52:0,43,749	0/0:51,0:22:40.06:0,40,527	0/0:31,0:31:75.37:0,75,1232	0/0:28,0:28:27.95:0,28,932	0/0:21,0:21:46.25:0,46,782	0/1:19,14:33:34.72:604,0,35	0/1:13,18:31:0.11:603,0,0	0/0:47,0:47:99:0,112,1955	0/0:28,0:28:64.31:0,64,1136	1/1:31,0:31:56.61:423,57,0	0/0:28,0:28:84.20:0,84,1331	0/0:30,0:30:76.15:0,76,1125	0/0:52,0:52:99:0,111,1176	0/1:18,15:33:18.94:412,0,19	0/0:37,0:37:93.19:0,93,1476	0/0:25,0:24:56.13:0,56,968	0/1:12,14:20:0.26:409,0,0	0/1:16,16:32:48.60:392,0,49	1/1:9,22:31:14.67:296,15,0	1/1:29,0:29:32.15:229,32,0	1/1:28,1:28:8.97:71,9,0	0/0:26,0:26:1.89:0,2,54	0/0:20,0:20:46.31:0,46,913	0/1:24,33:57:99:1247,0,183	0/1:16,20:36:32.81:622,0,33	0/1:2,2:4:0.09:96,0,0
chr10	101038053	.	CTCTGTG	C	4473.19	PASS	AB=0.775;AC=11;AF=0.196;AN=56;BaseQRankSum=7.026;DP=908;FS=11.362;HRun=0;HaplotypeScore=338.9171;InbreedingCoeff=0.6214;MQ=48.74;MQ0=16;MQRankSum=-12.623;QD=22.48;ReadPosRankSum=-2.658;VQSLOD=2.9664;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,40:47:75.09:1217,75,0	0/0:13,0:13:26.74:0,27,271	0/0:48,0:22:64.67:0,65,1211	0/0:49,0:21:43.09:0,43,634	0/0:33,0:33:92.88:0,93,2482	0/0:27,0:27:67.01:0,67,1980	0/0:22,0:22:63.07:0,63,1538	0/1:34,0:36:78.75:79,0,544	0/0:31,0:32:71.39:0,71,703	0/0:48,0:48:99:0,144,4121	0/0:27,0:27:75.21:0,75,2279	1/1:5,25:31:78.04:1517,78,0	0/0:29,0:29:87.23:0,87,2629	0/0:30,0:30:87.15:0,87,2135	0/0:48,0:48:99:0,111,2386	0/0:34,0:34:52.90:0,53,498	0/0:35,0:35:93.26:0,93,2845	0/0:27,0:26:67.41:0,67,1981	0/0:29,0:23:19.85:0,20,463	0/0:29,0:31:73.66:0,74,669	0/0:31,1:32:1.13:0,1,362	1/1:7,20:27:56.35:916,56,0	1/1:10,18:27:38.99:584,39,0	0/1:7,19:26:97.55:100,0,98	0/0:21,0:21:52.36:0,52,1828	0/0:55,0:57:99:0,119,1465	0/0:35,0:37:74.30:0,74,730	0/1:3,1:4:60.52:61,0,62
chr10	101038055	.	CTG	C	2507.84	PASS	AB=0.976;AC=26;AF=0.464;AN=56;BaseQRankSum=15.723;DP=895;FS=4.254;HRun=0;HaplotypeScore=285.8309;InbreedingCoeff=0.6499;MQ=49.21;MQ0=16;MQRankSum=-9.915;QD=5.54;ReadPosRankSum=-0.604;VQSLOD=2.8362;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:46,0:46:24.98:118,25,0	1/1:13,0:13:7.76:122,8,0	0/0:45,1:21:9.72:0,10,510	0/0:46,0:18:23.44:0,23,286	0/0:32,1:34:32.90:0,33,901	0/1:25,3:28:43.35:43,0,757	0/0:21,1:22:6.61:0,7,560	0/1:33,0:33:14.82:169,0,15	1/1:32,0:32:45.81:330,46,0	0/0:46,3:49:10.68:0,11,1486	0/0:27,0:27:24.68:0,25,835	1/1:31,0:31:47.85:231,48,0	0/0:28,0:29:69.18:0,69,1023	0/0:28,2:30:15.66:0,16,722	0/0:22,0:49:65.91:0,66,567	1/1:33,0:33:31.10:202,31,0	0/0:36,0:36:78.21:0,78,1177	0/0:27,1:27:25.13:0,25,830	0/1:28,0:22:43.32:155,0,43	1/1:30,0:30:35.29:185,35,0	0/1:32,0:32:3.40:77,0,3	1/1:26,0:26:22.73:112,23,0	1/1:24,0:23:8.52:43,9,0	0/0:25,0:25:1.55:0,2,46	0/0:20,1:21:15.66:0,16,725	1/1:57,0:57:27.76:549,28,0	1/1:36,0:36:18.91:319,19,0	1/1:4,0:4:8.78:60,9,0
chr10	101038484	.	G	GAGTCC	26604.23	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=0.709;DP=635;FS=0.306;HRun=0;HaplotypeScore=128.9893;InbreedingCoeff=0.9855;MQ=75.19;MQ0=0;MQRankSum=-15.462;QD=72.69;ReadPosRankSum=-1.395;VQSLOD=5.6339;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,18:24:45.15:1346,45,0	1/1:1,11:13:36.12:1140,36,0	0/0:21,0:21:60.20:0,60,1218	0/0:13,0:13:31.85:0,32,533	0/0:27,0:27:78.25:0,78,1604	0/0:17,0:17:48.16:0,48,1041	0/0:20,0:20:57.18:0,57,1157	1/1:14,19:34:99:2801,99,0	1/1:3,16:21:54.18:1594,54,0	0/0:26,0:26:75.25:0,75,1575	0/0:18,0:18:54.19:0,54,1172	1/1:4,16:21:57.15:1628,57,0	0/0:30,0:30:87.30:0,87,1852	0/0:21,0:21:63.22:0,63,1350	0/0:29,0:29:84.29:0,84,1805	1/1:4,17:23:63.22:1925,63,0	0/0:17,0:17:48.16:0,48,1041	0/0:16,0:16:45.15:0,45,973	1/1:7,11:19:54.12:1455,54,0	1/1:10,10:20:33.11:982,33,0	1/1:5,13:20:35.75:1102,36,0	1/1:4,20:28:57.20:1790,57,0	1/1:4,18:22:45.15:1424,45,0	1/1:5,23:31:54.62:1630,55,0	0/0:14,0:14:36.12:0,36,780	1/1:12,27:40:99:3626,120,0	1/1:9,37:46:99:3972,132,0	1/1:1,2:3:6.02:190,6,0
chr10	101038837	.	T	TG	18811.53	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-13.073;DP=757;FS=2.252;HRun=0;HaplotypeScore=71.4807;InbreedingCoeff=0.9994;MQ=87.72;MQ0=1;MQRankSum=-5.720;QD=43.34;ReadPosRankSum=1.628;VQSLOD=5.5014;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:44:99:1964,123,0	1/1:0,12:12:36.12:575,36,0	0/0:27,0:27:75.16:0,75,945	0/0:25,0:25:69.04:0,69,921	0/0:30,0:30:90.29:0,90,1243	0/0:17,0:17:51.14:0,51,664	0/0:28,0:28:84.28:0,84,1172	1/1:5,29:34:87.28:1368,87,0	1/1:0,29:29:81.28:1294,81,0	0/0:31,0:31:93.30:0,93,1285	0/0:18,0:18:54.18:0,54,755	1/1:1,36:37:99:1582,99,0	0/0:36,0:36:99:0,108,1485	0/0:24,0:24:72.24:0,72,1007	0/0:23,0:23:69.22:0,69,950	1/1:0,32:32:84.29:1334,84,0	0/0:29,0:29:87.28:0,87,1200	0/0:16,0:16:42.14:0,42,587	1/1:1,27:28:84.23:1247,84,0	1/1:0,23:23:66.14:1022,66,0	1/1:1,33:33:84.29:1340,84,0	1/1:0,30:30:81.17:1261,81,0	1/1:0,26:26:72.18:1132,72,0	1/1:0,28:28:81.28:1294,81,0	0/0:19,0:19:57.19:0,57,797	1/1:0,37:37:99:1770,111,0	1/1:1,32:33:81.28:1294,81,0	1/1:0,7:7:21.07:335,21,0
chr10	101039438	.	TAAA	T	5260.67	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=3.584;DP=501;FS=4.435;HRun=11;HaplotypeScore=86.7673;InbreedingCoeff=0.9368;MQ=72.20;MQ0=1;MQRankSum=-3.167;QD=29.55;ReadPosRankSum=-0.224;VQSLOD=4.1792;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:23:23.67:0,24,51	1/1:3,2:5:6.01:79,6,0	0/0:12,0:11:15.05:0,15,252	0/0:13,0:12:24.06:0,24,371	0/0:19,0:19:51.17:0,51,1015	0/0:24,0:24:63.18:0,63,1157	0/0:20,0:20:48.16:0,48,970	1/1:8,22:30:63.13:812,63,0	1/1:4,21:25:57.18:749,57,0	0/0:22,0:23:63.22:0,63,1257	0/0:17,0:17:48.16:0,48,954	0/0:0,0:17:21.97:0,22,49	0/0:11,0:11:33.11:0,33,650	0/0:20,0:20:45.14:0,45,874	0/0:3,0:25:62.28:0,62,469	1/1:2,15:17:42.13:551,42,0	0/0:27,0:28:75.24:0,75,1478	0/0:11,0:11:33.06:0,33,590	1/1:1,14:15:42.11:533,42,0	1/1:1,11:12:33.11:434,33,0	1/1:4,12:16:33.10:434,33,0	0/0:4,0:14:12.93:0,13,41	0/0:2,0:13:11.21:0,11,24	0/0:1,0:18:16.20:0,16,35	0/0:15,0:15:42.14:0,42,841	1/1:1,27:29:3.60:961,4,0	1/1:4,19:23:45.13:591,45,0	1/1:0,6:6:9.03:118,9,0
chr10	101039678	.	A	AATTT	831.39	PASS	AC=2;AF=0.071;AN=28;BaseQRankSum=-5.221;DP=207;FS=0.000;HRun=0;HaplotypeScore=43.3888;InbreedingCoeff=0.4334;MQ=56.02;MQ0=3;MQRankSum=1.590;QD=25.98;ReadPosRankSum=0.238;VQSLOD=3.0512;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:13:16.22:0,16,134	0/0:4,0:4:0.89:0,1,2	./.	./.	0/0:4,0:4:3.01:0,3,46	0/0:10,0:10:12.04:0,12,186	./.	./.	./.	0/0:5,0:5:3.01:0,3,47	0/0:8,0:8:12.04:0,12,186	0/0:4,0:7:0:0,0,0	0/0:3,0:3:6.02:0,6,93	./.	0/0:4,0:6:3:0,3,28	./.	1/1:12,20:32:39.13:917,39,0	0/0:14,0:14:8.24:0,8,100	0/0:12,0:12:5.99:0,6,50	./.	./.	./.	./.	./.	0/0:13,0:13:15.05:0,15,232	./.	./.	0/0:8,0:7:6:0,6,53
chr10	101039713	.	T	TA	113.65	PASS	AB=0.905;AC=7;AF=0.146;AN=48;BaseQRankSum=3.334;DP=152;FS=3.282;HRun=0;HaplotypeScore=33.0584;InbreedingCoeff=0.1927;MQ=50.77;MQ0=6;MQRankSum=-3.263;QD=4.06;ReadPosRankSum=1.105;VQSLOD=2.9494;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:32.52:0,33,288	1/1:0,1:1:3.01:31,3,0	./.	./.	0/0:8,0:8:21.05:0,21,261	0/0:10,0:10:30.09:0,30,404	0/0:2,0:2:6.02:0,6,84	0/1:9,0:5:12.43:12,0,145	0/0:5,0:5:10.39:0,10,124	0/0:1,0:1:3.01:0,3,42	0/0:9,0:9:24.07:0,24,321	0/1:10,0:10:69.22:69,0,202	0/0:4,0:4:12.03:0,12,151	0/0:2,0:2:6.02:0,6,84	0/0:4,0:4:8.91:0,9,83	0/0:3,0:3:8.96:0,9,82	0/0:28,0:28:59.94:0,60,584	0/0:8,0:8:21.07:0,21,294	0/1:3,2:5:54.10:54,0,108	0/0:2,0:2:6.02:0,6,81	./.	0/0:3,0:3:3.01:0,3,42	0/0:1,0:1:3.01:0,3,42	./.	0/0:11,0:11:33.10:0,33,445	0/0:2,0:2:5.95:0,6,42	0/0:5,0:5:12.04:0,12,160	1/1:1,2:2:6.02:65,6,0
chr10	101039726	.	GT	G	182.82	PASS	AB=0.917;AC=17;AF=0.304;AN=56;BaseQRankSum=9.151;DP=229;FS=0.750;HRun=1;HaplotypeScore=45.2621;InbreedingCoeff=0.5717;MQ=49.49;MQ0=4;MQRankSum=-7.241;QD=2.95;ReadPosRankSum=-0.031;VQSLOD=-0.6394;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:27.09:0,27,431	1/1:2,1:3:3.72:14,4,0	0/0:5,0:2:6.02:0,6,96	0/0:11,0:6:6.07:0,6,201	0/0:11,0:11:33.11:0,33,528	0/0:10,0:10:30.10:0,30,480	0/0:6,0:6:18.04:0,18,264	0/1:12,0:9:26.04:30,0,26	1/1:7,0:7:10.73:34,11,0	0/0:6,0:6:18.06:0,18,288	0/0:14,0:14:42.13:0,42,650	0/0:15,0:15:33.11:0,33,526	0/0:5,0:5:15.05:0,15,240	0/0:4,0:4:12.04:0,12,192	0/0:8,0:8:21.07:0,21,336	1/1:5,0:5:10.74:34,11,0	0/0:23,0:23:57.19:0,57,911	0/0:7,0:7:15.05:0,15,223	0/1:4,2:6:19.70:55,0,20	1/1:4,0:4:6.41:19,6,0	1/1:1,0:1:0.47:1,0,0	0/0:7,0:7:21.07:0,21,336	0/0:6,0:6:15.05:0,15,223	0/0:3,0:3:3.01:0,3,48	0/0:11,0:11:33.10:0,33,503	0/1:8,0:8:11.81:12,0,40	1/1:8,0:8:14.67:54,15,0	1/1:6,2:8:11.46:103,11,0
chr10	101039727	.	T	TAAAG	3624.81	PASS	AB=0.556;AC=19;AF=0.339;AN=56;BaseQRankSum=7.114;DP=239;FS=0.679;HRun=0;HaplotypeScore=50.5529;InbreedingCoeff=0.7756;MQ=49.90;MQ0=4;MQRankSum=-7.407;QD=51.78;ReadPosRankSum=-2.485;VQSLOD=2.9871;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:27.09:0,27,539	1/1:1,2:3:8.90:174,9,0	0/0:5,0:2:6.02:0,6,107	0/0:11,0:6:6.07:0,6,237	0/0:11,0:11:33.11:0,33,659	0/0:10,0:10:30.10:0,30,599	0/0:6,0:6:18.04:0,18,324	1/1:3,9:10:30.10:621,30,0	1/1:1,6:7:15.05:414,15,0	0/0:6,0:6:18.06:0,18,347	0/0:14,0:14:42.13:0,42,805	0/0:16,0:16:35.61:0,36,667	0/0:5,0:5:15.03:0,15,262	0/0:4,0:4:12.04:0,12,239	0/0:8,0:8:21.07:0,21,419	1/1:0,5:5:15.05:415,15,0	0/0:23,0:23:57.17:0,57,1101	0/0:7,0:7:3.93:0,4,190	1/1:4,4:8:24.08:568,24,0	1/1:0,4:5:9.03:248,9,0	1/1:2,0:2:1.25:3,1,0	0/0:7,0:7:21.07:0,21,395	0/0:6,0:6:14.66:0,15,262	0/0:3,0:3:3.01:0,3,60	0/0:12,0:12:33.10:0,33,610	0/1:2,8:10:22.72:398,0,23	1/1:0,8:9:18.06:498,18,0	1/1:8,0:8:23.93:286,24,0
chr10	101039818	.	AGGGC	A	2569.19	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=4.939;DP=322;FS=5.352;HRun=0;HaplotypeScore=77.4375;InbreedingCoeff=0.5929;MQ=67.97;MQ0=7;MQRankSum=-4.114;QD=23.36;ReadPosRankSum=-1.522;VQSLOD=2.8019;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:21,2:23:39.89:585,40,0	0/0:4,0:4:5.79:0,6,40	0/0:14,0:10:29.72:0,30,484	0/0:24,0:17:41.05:0,41,598	0/0:14,0:14:30.09:0,30,646	0/0:12,0:12:36.12:0,36,859	0/0:13,0:13:36.12:0,36,814	0/1:15,0:15:1.83:2,0,180	0/0:6,0:6:8.93:0,9,65	0/0:13,0:12:30.10:0,30,767	0/0:12,0:12:27.09:0,27,651	1/1:9,3:12:36.07:579,36,0	0/0:11,0:11:30.10:0,30,764	0/0:5,0:5:9.03:0,9,239	0/0:8,0:8:21.07:0,21,448	0/1:4,0:4:7.92:8,0,68	0/0:12,0:12:36.09:0,36,807	0/0:16,0:16:48.16:0,48,1173	0/0:11,0:9:14.83:0,15,103	0/0:7,0:7:8.50:0,9,77	0/1:10,0:10:31.58:35,0,32	1/1:13,1:14:36.06:592,36,0	1/1:13,3:16:45.06:698,45,0	1/1:9,0:9:17.95:232,18,0	0/0:18,0:17:48.16:0,48,1168	0/1:7,0:7:18.08:18,0,44	0/0:5,0:5:5.99:0,6,50	0/0:7,0:7:11.49:0,11,97
chr10	101040438	.	AGTT	A	5154.07	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.549;DP=612;FS=18.347;HRun=0;HaplotypeScore=119.0935;InbreedingCoeff=0.9963;MQ=86.21;MQ0=0;MQRankSum=-2.321;QD=42.60;ReadPosRankSum=3.298;VQSLOD=4.9673;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,35:36:90.26:1469,90,0	0/0:16,0:16:45.15:0,45,1008	0/0:27,0:27:69.23:0,69,1525	0/0:16,0:16:41.87:0,42,870	0/0:31,0:31:81.28:0,81,1812	0/0:26,0:26:78.27:0,78,1756	0/0:23,0:23:69.22:0,69,1487	0/0:29,0:29:81.27:0,81,1781	0/0:18,0:18:51.15:0,51,1109	0/0:25,0:24:72.25:0,72,1601	0/0:15,0:15:45.15:0,45,1004	1/1:1,25:26:69.24:1137,69,0	0/0:18,0:18:51.18:0,51,1155	0/0:19,0:19:57.20:0,57,1291	0/0:21,0:21:60.21:0,60,1341	0/0:20,0:20:57.20:0,57,1292	0/0:24,0:24:72.23:0,72,1588	0/0:24,0:24:69.24:0,69,1563	0/0:25,0:25:63.20:0,63,1343	0/0:15,0:15:42.14:0,42,951	0/0:19,0:19:54.19:0,54,1182	1/1:0,14:14:42.14:700,42,0	1/1:3,13:16:39.13:649,39,0	1/1:0,29:29:72.25:1199,72,0	0/0:19,0:18:51.18:0,51,1155	0/0:15,0:15:42.14:0,42,952	0/0:40,0:39:99:0,117,2629	0/0:6,0:6:15.05:0,15,340
chr10	101040534	.	TA	T	1055.82	PASS	AB=0.944;AC=11;AF=0.196;AN=56;BaseQRankSum=7.525;DP=591;FS=1.364;HRun=1;HaplotypeScore=112.1183;InbreedingCoeff=0.8524;MQ=74.30;MQ0=1;MQRankSum=-1.951;QD=8.25;ReadPosRankSum=0.585;VQSLOD=0.8980;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,2:26:64.10:369,64,0	0/0:10,0:11:26.08:0,26,238	0/0:20,1:18:29.70:0,30,396	0/0:13,1:11:26.40:0,26,301	0/0:35,0:35:99:0,105,1426	0/0:22,0:22:43.59:0,44,903	0/0:14,1:15:35.96:0,36,611	0/0:24,0:24:37.76:0,38,415	0/0:14,0:14:33.55:0,34,285	0/0:28,0:28:81.27:0,81,1271	0/0:26,0:26:75.06:0,75,1070	1/1:9,0:9:23.01:127,23,0	0/0:24,0:24:72.05:0,72,1055	0/0:15,0:15:38.07:0,38,644	0/0:30,0:30:68.97:0,69,676	0/0:26,0:26:45.80:0,46,488	0/0:21,0:21:63.21:0,63,963	0/0:10,0:10:30.08:0,30,434	0/0:24,0:24:36.78:0,37,398	0/0:31,0:31:87.73:0,88,774	0/0:19,0:19:39.41:0,39,364	1/1:15,0:15:40.41:211,40,0	1/1:24,0:24:28.27:242,28,0	1/1:20,0:20:48.26:273,48,0	0/0:25,0:25:72.23:0,72,1081	0/0:20,0:20:31.07:0,31,379	0/1:32,2:34:11.96:12,0,531	0/0:7,0:7:2.18:0,2,129
chr10	101040535	.	AC	A	4127.46	PASS	AB=0.978;AC=20;AF=0.357;AN=56;BaseQRankSum=1.022;DP=592;FS=0.000;HRun=2;HaplotypeScore=103.0448;InbreedingCoeff=0.3567;MQ=73.52;MQ0=1;MQRankSum=1.486;QD=14.90;ReadPosRankSum=-1.884;VQSLOD=2.7157;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,18:26:72.20:870,72,0	0/1:11,0:11:8.49:8,0,34	0/0:23,0:19:30.53:0,31,366	0/0:13,0:10:20.20:0,20,221	0/0:34,0:34:98.47:0,98,1349	0/0:22,0:22:37.54:0,38,724	0/0:15,0:15:38.35:0,38,539	1/1:24,1:25:12.81:223,13,0	0/1:14,0:14:28.14:28,0,31	0/0:27,0:27:81.25:0,81,1122	0/0:26,0:26:68.26:0,68,959	1/1:1,8:9:24.08:309,24,0	0/0:24,0:24:61.83:0,62,871	0/0:15,0:15:35.16:0,35,564	0/0:29,0:29:22.45:0,22,132	0/1:27,0:27:44.83:116,0,45	0/0:21,0:21:63.08:0,63,844	0/0:10,0:10:27.07:0,27,379	0/1:24,0:24:22.52:170,0,23	0/0:31,0:31:1.79:0,2,118	0/1:18,0:18:23.38:93,0,23	1/1:1,14:15:45.08:549,45,0	1/1:3,21:24:59.52:772,60,0	1/1:3,17:20:54.16:666,54,0	0/0:25,0:25:69.16:0,69,955	0/1:19,1:20:32.29:138,0,32	0/1:37,0:37:99:157,0,101	0/1:6,1:7:18.77:26,0,19
chr10	101040537	.	CT	C	1231.61	PASS	AB=0.950;AC=11;AF=0.196;AN=56;BaseQRankSum=5.527;DP=615;FS=0.795;HRun=11;HaplotypeScore=120.5387;InbreedingCoeff=0.6644;MQ=74.27;MQ0=1;MQRankSum=0.061;QD=8.05;ReadPosRankSum=2.414;VQSLOD=2.3237;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,1:31:21.57:232,0,22	0/0:11,0:11:27.54:0,28,287	0/0:22,1:20:9.02:0,9,213	0/0:12,0:11:13.52:0,14,148	0/0:33,1:34:65.57:0,66,895	0/1:19,3:22:30.16:30,0,423	0/0:15,0:15:14.42:0,14,340	0/0:25,0:25:45.87:0,46,508	0/0:17,0:17:39:0,39,381	0/0:25,0:26:69.02:0,69,709	0/0:24,2:26:25.70:0,26,609	0/1:10,0:10:0.60:73,0,1	0/0:21,1:23:32.40:0,32,519	0/0:16,0:16:17.33:0,17,352	1/1:3,25:29:52.96:425,53,0	0/0:28,0:28:59.24:0,59,677	0/0:22,0:22:51.11:0,51,535	0/0:10,0:10:2.43:0,2,231	0/0:26,0:26:46.76:0,47,500	0/0:32,0:32:92.91:0,93,929	0/0:19,0:19:42.08:0,42,431	1/1:16,0:16:17.38:167,17,0	1/1:24,0:24:30.06:245,30,0	1/1:21,0:21:45.56:229,46,0	0/0:24,0:24:61.35:0,61,614	0/0:23,0:23:34.82:0,35,410	0/0:38,0:38:65.77:0,66,808	0/0:8,0:8:11.98:0,12,189
chr10	101040788	.	TTA	T	2747.65	PASS	AB=0.581;AC=15;AF=0.268;AN=56;BaseQRankSum=17.660;DP=630;FS=1.601;HRun=0;HaplotypeScore=158.8342;InbreedingCoeff=0.5929;MQ=86.56;MQ0=0;MQRankSum=-16.898;QD=15.26;ReadPosRankSum=1.762;VQSLOD=3.9250;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1176	1/1:0,14:14:41.81:321,42,0	0/0:35,0:35:99:0,99,1789	0/0:24,0:24:66.22:0,66,1164	0/0:22,0:22:66.23:0,66,1180	0/0:29,0:29:84.29:0,84,1529	0/0:23,0:23:66.21:0,66,1178	0/1:10,23:33:99:472,0,154	1/1:1,17:18:44.63:347,45,0	0/0:36,0:36:99:0,102,1868	0/0:26,0:26:78.27:0,78,1429	0/0:20,0:20:60.11:0,60,610	0/0:27,0:27:78.27:0,78,1428	0/0:27,0:27:81.26:0,81,1454	0/0:26,0:26:75.23:0,75,1326	0/1:2,12:14:0.07:234,0,0	0/0:21,0:21:63.22:0,63,1154	0/0:22,0:22:63.22:0,63,1154	0/1:4,10:14:42.34:223,0,42	1/1:5,17:22:23.82:377,24,0	0/1:2,6:8:10.20:19,0,10	0/0:15,0:15:45.08:0,45,486	0/0:13,0:13:36.09:0,36,400	0/0:23,0:23:46.19:0,46,664	0/0:23,0:23:66.21:0,66,1180	0/1:12,19:31:99:451,0,191	1/1:1,21:22:33.69:420,34,0	1/1:1,3:4:7.90:69,8,0
chr10	101040794	.	GACTAT	G	6907.80	PASS	AB=0.577;AC=18;AF=0.321;AN=56;BaseQRankSum=18.341;DP=636;FS=1.127;HRun=0;HaplotypeScore=184.5520;InbreedingCoeff=0.8033;MQ=90.81;MQ0=0;MQRankSum=-17.306;QD=41.12;ReadPosRankSum=2.619;VQSLOD=5.1115;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,3985	1/1:0,14:14:42.14:698,42,0	0/0:40,0:40:99:0,120,3655	0/0:26,0:26:78.27:0,78,2422	0/0:21,0:21:63.20:0,63,1912	0/0:30,0:30:84.29:0,84,2798	0/0:22,0:22:66.23:0,66,2129	0/1:6,23:29:52.65:1042,0,53	1/1:1,16:18:51.17:831,51,0	0/0:34,0:34:99:0,102,3102	0/0:27,0:27:81.25:0,81,2268	0/0:23,0:23:69.24:0,69,2196	0/0:26,0:26:78.27:0,78,2504	0/0:28,0:28:84.29:0,84,2706	0/0:26,0:26:78.25:0,78,2426	1/1:2,12:14:41.37:622,41,0	0/0:22,0:22:66.23:0,66,2070	0/0:22,0:22:63.22:0,63,2099	1/1:3,10:13:6.14:509,6,0	1/1:3,17:20:58.07:930,58,0	1/1:1,6:7:8.62:108,9,0	0/0:16,0:16:48.15:0,48,1454	0/0:14,0:14:39.07:0,39,1122	0/0:24,0:24:69.19:0,69,2145	0/0:24,0:24:72.25:0,72,2302	0/1:9,19:28:99:1000,0,174	1/1:0,21:21:60.20:985,60,0	1/1:1,3:4:12.04:183,12,0
chr10	101041371	.	T	TTGAC	11251.14	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=3.444;DP=661;FS=0.000;HRun=0;HaplotypeScore=147.3403;InbreedingCoeff=0.9721;MQ=68.53;MQ0=0;MQRankSum=-14.643;QD=50.23;ReadPosRankSum=-1.629;VQSLOD=5.2901;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,102,1806	1/1:2,3:5:9.03:235,9,0	0/0:13,0:13:30.03:0,30,481	0/0:22,0:22:54.19:0,54,976	0/0:23,0:23:35.98:0,36,654	0/0:16,0:16:36.12:0,36,646	0/0:28,0:28:78.27:0,78,1418	1/1:17,18:35:75.15:1657,75,0	1/1:4,20:24:57.20:1487,57,0	0/0:25,0:25:54.19:0,54,982	0/0:11,0:11:21.07:0,21,376	0/0:15,0:15:33.10:0,33,570	0/0:29,0:29:81.23:0,81,1438	0/0:31,0:31:72.25:0,72,1298	0/0:26,0:26:66.21:0,66,1133	1/1:4,27:32:90.31:2341,90,0	0/0:44,0:44:99:0,111,2006	0/0:17,0:17:45.15:0,45,802	1/1:16,6:22:30.10:753,30,0	1/1:10,16:29:45.15:1132,45,0	1/1:11,11:22:15.05:392,15,0	0/0:16,0:16:45.14:0,45,780	0/0:24,0:24:42.13:0,42,734	0/0:35,0:35:93.32:0,93,1679	0/0:13,0:13:24.08:0,24,437	1/1:11,17:29:60.20:1452,60,0	1/1:1,22:23:63.22:1646,63,0	1/1:1,2:3:6.02:157,6,0
chr10	101041528	.	A	AG	1336.37	PASS	AB=0.960;AC=9;AF=0.161;AN=56;BaseQRankSum=-4.907;DP=563;FS=5.268;HRun=9;HaplotypeScore=77.2151;InbreedingCoeff=0.8020;MQ=77.32;MQ0=0;MQRankSum=-0.489;QD=13.78;ReadPosRankSum=0.099;VQSLOD=3.6540;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:83.93:0,84,724	0/0:10,0:10:26.99:0,27,234	0/0:19,0:18:7.41:0,7,166	0/1:23,1:21:24.44:24,0,74	0/0:19,0:19:50.96:0,51,436	0/0:14,0:14:38.97:0,39,333	0/0:23,0:23:56.96:0,57,490	0/0:27,0:27:59.92:0,60,508	0/0:18,0:18:53.93:0,54,456	0/0:25,0:25:53.98:0,54,469	0/0:11,0:11:32.99:0,33,286	1/1:4,10:14:27.07:297,27,0	0/0:15,0:15:23.40:0,23,297	0/0:27,0:27:77.98:0,78,677	0/0:29,0:28:62.96:0,63,546	0/0:16,0:15:14.90:0,15,352	0/0:21,1:22:29.77:0,30,479	0/0:17,0:17:50.92:0,51,431	0/0:12,0:12:23.98:0,24,208	0/0:29,0:29:71.90:0,72,613	0/0:18,0:18:44.98:0,45,390	1/1:2,10:13:26.81:285,27,0	1/1:4,13:17:36.09:393,36,0	1/1:9,19:29:5.02:494,5,0	0/0:21,0:21:56.97:0,57,492	0/0:21,0:21:56.96:0,57,490	0/0:27,0:27:71.02:0,71,605	0/0:4,0:4:12:0,12,104
chr10	101041665	.	AAGAG	A	1429.97	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=9.812;DP=489;FS=10.195;HRun=0;HaplotypeScore=131.3355;InbreedingCoeff=0.7642;MQ=66.33;MQ0=8;MQRankSum=-7.441;QD=12.54;ReadPosRankSum=0.358;VQSLOD=2.6948;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,2:19:33.43:370,33,0	0/1:8,0:8:10.82:11,0,45	0/1:36,0:15:5.26:5,0,355	0/0:44,0:25:22.82:0,23,362	0/0:14,0:14:33.11:0,33,738	0/0:18,0:18:44.06:0,44,861	0/0:17,0:17:21.83:0,22,717	0/0:26,0:26:59.20:0,59,676	0/0:21,0:21:9.01:0,9,137	0/0:22,0:22:60.18:0,60,1178	0/0:15,0:15:45.11:0,45,883	1/1:11,2:12:12.03:161,12,0	0/0:9,0:9:26.23:0,26,500	0/0:18,0:17:36.06:0,36,670	0/0:21,0:21:48.64:0,49,1113	0/0:10,0:10:9.92:0,10,154	0/0:27,0:26:63.21:0,63,1491	0/0:22,0:22:48.16:0,48,1058	0/0:11,0:11:19.94:0,20,179	0/0:14,0:14:8.45:0,8,352	0/0:7,0:7:15.01:0,15,163	1/1:3,4:7:17.86:184,18,0	1/1:17,5:22:45.49:679,45,0	1/1:7,2:9:20.71:196,21,0	0/0:14,0:14:38.87:0,39,746	0/0:14,0:14:39.09:0,39,486	0/0:23,0:23:57.07:0,57,643	0/0:7,0:6:11.29:0,11,204
chr10	101041678	.	GGAGAGAGGGAGA	G	4145.56	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=7.388;DP=457;FS=0.000;HRun=0;HaplotypeScore=167.6435;InbreedingCoeff=0.7006;MQ=51.46;MQ0=12;MQRankSum=-4.946;QD=18.76;ReadPosRankSum=0.484;VQSLOD=2.6267;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:16:23.27:320,23,0	1/1:2,5:7:6.02:188,6,0	0/0:27,0:8:8.72:0,9,66	0/0:26,0:9:10.17:0,10,89	0/0:15,0:15:29.64:0,30,592	0/0:21,0:21:45.28:0,45,897	0/0:16,0:15:35.63:0,36,731	1/1:22,0:22:50.38:370,50,0	1/1:3,0:20:3.01:64,3,0	0/0:20,0:21:47.73:0,48,1103	0/0:19,0:19:38.66:0,39,1124	1/1:13,0:12:9.49:193,9,0	0/0:13,0:13:33.60:0,34,553	0/0:16,0:15:35.94:0,36,691	0/1:23,0:23:99:170,0,258	1/1:3,6:9:6.49:132,6,0	0/0:26,0:25:41.30:0,41,1749	0/0:22,0:21:39:0,39,864	1/1:0,9:9:26.94:231,27,0	1/1:13,0:13:29.90:297,30,0	0/1:9,0:7:48.18:105,0,48	1/1:6,0:6:18.06:418,18,0	1/1:21,0:21:44.51:585,45,0	1/1:8,0:8:15.79:200,16,0	0/0:14,0:14:33.76:0,34,629	0/1:19,0:19:99:331,0,144	1/1:18,0:18:41.90:383,42,0	1/1:7,1:5:8.81:158,9,0
chr10	101041684	.	AGG	A	2357.50	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=8.710;DP=439;FS=19.075;HRun=3;HaplotypeScore=104.1024;InbreedingCoeff=0.5091;MQ=50.95;MQ0=15;MQRankSum=-4.027;QD=8.90;ReadPosRankSum=-0.579;VQSLOD=-0.6978;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:17:25.39:162,25,0	1/1:6,1:7:5.76:48,6,0	0/0:18,0:6:8.62:0,9,66	0/0:21,0:7:6.92:0,7,81	0/1:14,0:14:12.31:12,0,222	0/0:21,0:21:48.50:0,49,384	0/0:16,0:15:10.08:0,10,216	1/1:12,10:21:50.27:399,50,0	0/1:18,0:18:0.48:11,0,0	0/1:18,0:17:20.81:21,0,263	0/0:19,0:19:17.55:0,18,320	1/1:1,12:14:17.60:117,18,0	0/0:13,0:13:8.65:0,9,231	0/1:16,0:15:14.60:15,0,218	0/1:22,0:22:13.08:13,0,258	1/1:6,0:6:5.90:40,6,0	0/0:26,0:25:37.33:0,37,529	0/0:24,0:23:12.19:0,12,244	1/1:9,0:9:23.54:194,24,0	1/1:13,0:13:18.57:205,19,0	1/1:8,0:6:9.89:97,10,0	1/1:2,0:7:20.54:171,21,0	1/1:15,1:21:47:274,47,0	1/1:4,1:7:14.67:92,15,0	0/0:14,0:14:9.32:0,9,259	0/1:20,0:20:0.09:309,0,0	1/1:17,0:17:22.68:313,23,0	0/1:8,0:4:1.30:58,0,1
chr10	101041686	.	G	GGA	895.10	PASS	AB=0.991;AC=33;AF=0.611;AN=54;BaseQRankSum=-3.820;DP=440;FS=0.000;HRun=0;HaplotypeScore=114.2797;InbreedingCoeff=0.0299;MQ=50.80;MQ0=15;MQRankSum=2.752;QD=2.60;ReadPosRankSum=-3.919;VQSLOD=1.0692;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:4.35:32,0,4	1/1:7,0:7:3.37:17,3,0	./.	0/0:19,0:6:0:0,0,0	0/0:15,0:15:0.15:0,0,57	0/1:20,1:21:0.36:60,0,0	1/1:16,0:15:8.30:95,8,0	1/1:22,0:21:0.94:3,1,0	1/1:18,0:18:2.60:10,3,0	0/1:16,0:16:31.87:133,0,32	0/1:19,0:19:14.51:15,0,27	0/1:16,0:15:13.12:49,0,13	1/1:14,0:14:9.01:99,9,0	1/1:13,2:15:17.61:186,18,0	0/0:17,0:21:6.47:0,6,29	1/1:6,0:6:3.31:22,3,0	0/1:24,1:25:47.21:47,0,79	1/1:12,9:21:5.28:139,5,0	1/1:10,0:10:2.99:24,3,0	0/1:14,0:14:15.23:16,0,15	0/0:8,0:6:3.47:0,3,28	0/1:8,0:8:4.15:4,0,79	0/1:21,0:21:19.17:19,0,49	0/0:7,0:7:8.83:0,9,64	1/1:17,0:17:4.15:16,4,0	1/1:20,0:20:4.63:30,5,0	1/1:17,0:17:2.98:22,3,0	0/0:9,0:5:2.84:0,3,14
chr10	101041688	.	AGAGAGAGAGAGAG	A	1493.70	PASS	AB=0.923;AC=15;AF=0.268;AN=56;BaseQRankSum=8.607;DP=443;FS=3.424;HRun=0;HaplotypeScore=176.9524;InbreedingCoeff=0.1717;MQ=49.05;MQ0=15;MQRankSum=-6.929;QD=9.34;ReadPosRankSum=3.975;VQSLOD=2.6217;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:17:80.49:80,0,214	1/1:7,0:7:5.81:98,6,0	0/1:14,0:3:7.93:8,0,29	0/0:19,0:5:12.39:0,12,111	0/0:14,0:14:36.10:0,36,1009	0/0:23,0:23:41.92:0,42,1223	0/0:15,0:14:35.61:0,36,1096	0/0:22,0:21:58.45:0,58,720	1/1:18,0:18:3.01:41,3,0	0/0:17,0:16:45.15:0,45,1670	0/0:20,0:20:38.88:0,39,1534	0/1:14,2:15:0.72:203,0,1	0/0:14,0:14:39.13:0,39,1044	0/0:18,0:17:42.14:0,42,1188	0/1:21,0:21:77.44:77,0,423	0/1:6,0:6:26.48:27,0,26	0/0:26,0:25:66.22:0,66,2412	0/0:22,0:21:45.15:0,45,1328	0/0:11,0:11:32.11:0,32,379	0/1:14,0:14:38.72:39,0,318	0/0:8,0:6:15.03:0,15,237	1/1:4,5:9:18.30:472,18,0	0/1:16,4:21:99:402,0,219	0/1:5,2:7:46.21:181,0,46	0/0:18,0:18:39.13:0,39,1091	0/0:19,0:19:50.96:0,51,805	0/0:17,0:17:46.92:0,47,520	0/1:9,0:5:29.37:29,0,171
chr10	101042472	.	C	CATGG	11896.59	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=10.011;DP=658;FS=0.000;HRun=0;HaplotypeScore=155.2580;InbreedingCoeff=0.9708;MQ=76.94;MQ0=0;MQRankSum=-16.339;QD=58.03;ReadPosRankSum=-2.589;VQSLOD=5.3651;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,153,2799	1/1:1,6:7:15.05:399,15,0	0/0:26,0:25:63:0,63,1110	0/0:22,0:22:40.72:0,41,842	0/0:31,0:31:87.27:0,87,1559	0/0:24,0:24:69.24:0,69,1262	0/0:22,0:22:66.21:0,66,1201	1/1:11,31:42:99:2626,108,0	1/1:2,23:25:60.20:1512,60,0	0/0:27,0:27:72.25:0,72,1273	0/0:20,0:20:60.19:0,60,1085	0/0:26,0:26:69.24:0,69,1261	0/0:23,0:23:63.20:0,63,1116	0/0:23,0:23:60.21:0,60,1119	0/0:25,0:25:63.20:0,63,1111	1/1:4,29:33:75.26:1953,75,0	0/0:34,0:34:89.96:0,90,1603	0/0:15,0:15:45.14:0,45,806	1/1:3,16:20:51.17:1251,51,0	1/1:0,11:11:21.07:557,21,0	1/1:5,18:25:35.16:869,35,0	0/0:21,0:21:63.19:0,63,1101	0/0:17,0:17:45.14:0,45,808	0/0:24,0:24:69.10:0,69,1278	0/0:21,0:21:60.21:0,60,1095	1/1:2,14:17:42.10:1057,42,0	1/1:5,19:24:63.21:1593,63,0	1/1:0,1:1:3.01:80,3,0
chr10	101042797	.	AT	A	4126.22	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=13.700;DP=412;FS=0.000;HRun=8;HaplotypeScore=84.7318;InbreedingCoeff=0.9691;MQ=84.18;MQ0=0;MQRankSum=-6.272;QD=23.05;ReadPosRankSum=0.302;VQSLOD=3.8389;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:42.06:406,42,0	1/1:0,10:10:27.04:261,27,0	0/0:12,0:12:16.40:0,16,257	0/0:17,0:17:32.70:0,33,314	0/0:28,0:28:78.23:0,78,930	0/0:21,0:21:63.19:0,63,761	0/0:18,0:18:54.17:0,54,652	1/1:4,18:22:54.08:521,54,0	1/1:0,10:10:30.05:290,30,0	0/0:23,0:23:54.17:0,54,651	0/0:19,0:19:57.16:0,57,669	1/1:1,8:9:24.04:232,24,0	0/0:13,0:13:36.10:0,36,423	0/0:18,0:18:54.12:0,54,636	0/0:17,0:17:45.14:0,45,544	1/1:2,12:14:27.04:260,27,0	0/0:13,0:13:36.09:0,36,412	0/0:16,0:15:42.11:0,42,495	1/1:3,7:10:18.03:174,18,0	1/1:1,12:13:36.05:346,36,0	1/1:1,8:8:15.02:145,15,0	1/1:2,13:15:42.05:400,42,0	1/1:1,13:14:27.04:261,27,0	1/1:1,7:8:18.02:174,18,0	0/0:18,0:18:48.15:0,48,580	1/1:0,9:9:27.04:261,27,0	1/1:1,13:14:39.06:376,39,0	1/1:2,1:3:2.98:22,3,0
chr10	101042821	.	GCTTATCTC	G	7003.25	PASS	AB=0.524;AC=17;AF=0.315;AN=54;BaseQRankSum=12.046;DP=408;FS=0.443;HRun=0;HaplotypeScore=150.8519;InbreedingCoeff=0.9018;MQ=81.97;MQ0=0;MQRankSum=-11.849;QD=66.70;ReadPosRankSum=-1.420;VQSLOD=4.7301;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.20:0,60,2525	1/1:6,2:8:8.99:195,9,0	0/0:11,0:11:32.93:0,33,1047	0/0:19,0:19:51.04:0,51,1846	0/0:29,0:29:87.28:0,87,3711	0/0:20,0:20:57.18:0,57,2471	0/0:16,0:16:48.10:0,48,1910	1/1:8,8:16:44.82:877,45,0	1/1:2,13:15:39.13:1141,39,0	0/0:21,0:21:63.21:0,63,2721	0/0:20,0:20:60.18:0,60,2390	0/0:12,0:12:33.11:0,33,1363	0/0:13,0:13:36.12:0,36,1619	0/0:19,0:19:57.20:0,57,2536	0/0:18,0:18:54.19:0,54,2447	1/1:4,8:12:36.08:829,36,0	0/0:15,0:15:42.14:0,42,1902	0/0:12,0:11:36.12:0,36,1583	1/1:2,11:13:36.05:861,36,0	1/1:1,6:7:18.06:526,18,0	1/1:1,7:7:21.05:548,21,0	0/0:14,0:14:42.12:0,42,1678	0/0:14,0:14:42.14:0,42,1890	0/0:10,0:10:30.10:0,30,1176	0/0:17,0:17:51.18:0,51,2188	0/1:1,10:11:99:845,0,103	1/1:2,13:15:45.05:1182,45,0	./.
chr10	101042847	.	GAAA	G	4654.52	PASS	AB=0.773;AC=18;AF=0.333;AN=54;BaseQRankSum=12.178;DP=429;FS=4.674;HRun=5;HaplotypeScore=128.1305;InbreedingCoeff=0.8426;MQ=71.01;MQ0=0;MQRankSum=-13.439;QD=37.54;ReadPosRankSum=-1.281;VQSLOD=2.8762;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:10.16:0,10,492	1/1:0,5:5:15.05:250,15,0	0/0:20,0:14:24.17:0,24,505	0/0:20,0:17:42.70:0,43,762	0/0:28,0:28:81.27:0,81,1734	0/0:17,0:17:48.10:0,48,973	0/0:19,0:19:51.16:0,51,1018	1/1:2,9:11:30.03:441,30,0	1/1:1,15:16:45.15:750,45,0	0/0:18,0:18:48.16:0,48,1065	0/0:15,0:14:39.13:0,39,899	0/0:10,0:10:30.10:0,30,408	0/0:14,0:14:39.13:0,39,900	0/0:19,0:19:54.17:0,54,1157	0/0:28,0:28:84.29:0,84,1938	1/1:2,11:13:36.05:569,36,0	0/0:20,0:20:60.21:0,60,1364	0/0:9,0:9:27.08:0,27,577	1/1:2,10:12:30.10:501,30,0	1/1:0,13:13:35.99:536,36,0	1/1:0,9:8:24.01:367,24,0	0/1:17,0:17:4.71:5,0,429	0/0:14,0:14:39.12:0,39,532	0/0:13,0:13:37.01:0,37,508	0/0:18,0:17:54.17:0,54,1180	0/1:2,10:12:35.93:467,0,36	1/1:1,15:16:48.10:768,48,0	./.
chr10	101042868	.	GGA	G	980.40	PASS	AB=0.972;AC=26;AF=0.481;AN=54;BaseQRankSum=15.122;DP=452;FS=9.140;HRun=0;HaplotypeScore=132.7529;InbreedingCoeff=0.8631;MQ=64.18;MQ0=1;MQRankSum=-9.521;QD=5.16;ReadPosRankSum=1.534;VQSLOD=2.3845;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,1:17:7.37:103,0,7	1/1:8,0:8:11.37:32,11,0	0/0:34,0:19:34.90:0,35,458	0/0:26,0:12:35.48:0,35,570	0/0:28,0:28:81.28:0,81,1480	0/0:17,0:17:51.16:0,51,902	0/0:17,0:17:51.16:0,51,858	1/1:17,0:16:25.48:109,25,0	1/1:15,0:15:25.44:73,25,0	0/0:11,0:11:27.08:0,27,420	0/0:13,0:13:39.10:0,39,617	1/1:14,0:14:31.97:168,32,0	0/0:16,0:16:45.15:0,45,768	0/0:17,0:17:51.16:0,51,860	0/0:32,0:32:89.59:0,90,1489	1/1:13,1:14:27.52:127,28,0	0/0:26,0:26:75.23:0,75,1259	0/0:8,0:8:24.06:0,24,393	1/1:11,0:11:14.76:43,15,0	1/1:13,0:13:18.05:51,18,0	1/1:11,0:10:13.52:50,14,0	1/1:12,2:14:19.34:116,19,0	1/1:13,0:13:20.64:116,21,0	1/1:16,0:16:28.71:115,29,0	0/0:16,0:15:45.15:0,45,774	0/1:13,0:13:6.13:27,0,6	1/1:14,0:13:24.06:69,24,0	./.
chr10	101042869	.	GA	G	4808.70	PASS	AC=28;AF=0.519;AN=54;BaseQRankSum=15.562;DP=442;FS=7.731;HRun=1;HaplotypeScore=106.5965;InbreedingCoeff=0.9728;MQ=64.77;MQ0=1;MQRankSum=-9.492;QD=26.71;ReadPosRankSum=1.364;VQSLOD=4.2032;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:13.23:196,13,0	1/1:0,8:8:21.07:286,21,0	0/0:34,0:19:17.36:0,17,368	0/0:26,1:13:38.81:0,39,494	0/0:28,0:28:81.27:0,81,1182	0/0:17,0:17:47.31:0,47,701	0/0:17,0:17:51.15:0,51,709	1/1:4,12:15:41.93:474,42,0	1/1:0,14:14:42.14:580,42,0	0/0:9,0:9:27.08:0,27,364	0/0:13,0:13:39.10:0,39,514	1/1:14,0:14:35.49:214,35,0	0/0:17,0:17:48.14:0,48,654	0/0:17,0:17:51.17:0,51,721	0/0:32,0:32:90.53:0,91,1236	1/1:2,12:14:42.01:532,42,0	0/0:26,0:26:75.17:0,75,1035	0/0:8,0:8:24.04:0,24,309	1/1:0,8:8:24.08:333,24,0	1/1:1,11:12:33.07:430,33,0	1/1:3,7:10:21.02:253,21,0	1/1:13,1:14:33.74:191,34,0	1/1:13,0:13:33.80:188,34,0	1/1:16,0:16:45.26:244,45,0	0/0:16,0:15:45.11:0,45,615	1/1:2,9:11:4.19:348,4,0	1/1:0,13:13:39.13:540,39,0	./.
chr10	101042874	.	G	GA	2556	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=5.359;DP=455;FS=0.000;HRun=0;HaplotypeScore=115.7519;InbreedingCoeff=0.9946;MQ=63.03;MQ0=1;MQRankSum=-0.676;QD=32.77;ReadPosRankSum=1.922;VQSLOD=3.1006;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:18:39.29:540,39,0	0/0:9,0:9:20.74:0,21,144	0/0:33,0:18:45.82:0,46,496	0/0:28,0:12:36.11:0,36,464	0/0:28,0:28:81.26:0,81,1111	0/0:19,0:19:55.37:0,55,718	0/0:22,0:22:66.16:0,66,838	0/0:18,0:17:38.60:0,39,280	0/0:14,0:14:41.58:0,42,290	0/0:8,0:8:24.08:0,24,335	0/0:11,0:11:33.10:0,33,443	1/1:1,13:14:38.84:528,39,0	0/0:18,0:18:51.16:0,51,696	0/0:17,0:17:51.17:0,51,712	0/0:32,0:32:93.26:0,93,1275	0/0:13,0:13:37.93:0,38,241	0/0:26,0:26:63.14:0,63,938	0/0:7,0:7:21.04:0,21,272	0/0:9,0:9:26.84:0,27,204	0/0:11,0:11:32.46:0,32,211	0/0:10,0:10:17.86:0,18,127	1/1:4,10:14:33.06:463,33,0	1/1:2,10:12:30.06:453,30,0	1/1:4,16:20:52.50:746,52,0	0/0:18,0:17:48.11:0,48,633	0/0:11,0:11:26.36:0,26,178	0/0:14,0:13:41.63:0,42,291	./.
chr10	101043669	.	TTGTTTTTGTTTTTGTTTTTGTTTTTTTTTTTTTA	T	375.19	PASS	AB=0.990;AC=12;AF=0.214;AN=56;BaseQRankSum=0.320;DP=416;FS=0.000;HRun=0;HaplotypeScore=293.2169;InbreedingCoeff=0.3929;MQ=63.88;MQ0=5;MQRankSum=-0.919;QD=3.79;ReadPosRankSum=-6.683;VQSLOD=0.3103;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:26.35:0,26,478	0/1:6,0:6:13.60:14,0,131	0/0:37,0:14:5.37:0,5,1117	0/1:22,0:10:14.20:14,0,294	0/0:33,0:32:83.73:0,84,7683	0/0:25,0:25:75.23:0,75,7671	0/0:10,0:10:27.98:0,28,2665	0/1:20,0:19:39.33:39,0,508	0/0:2,0:2:5.85:0,6,47	0/0:24,0:23:69.24:0,69,7423	0/0:18,0:18:54.19:0,54,6008	1/1:8,0:8:17.55:96,18,0	0/0:15,0:15:38.94:0,39,3970	0/0:11,0:11:29.76:0,30,2084	0/0:19,0:18:39.67:0,40,4032	0/1:8,0:8:17.59:18,0,138	0/0:23,0:23:56.09:0,56,4902	0/0:10,0:10:27:0,27,3041	0/0:14,0:12:2.61:0,3,445	0/0:12,0:12:19.95:0,20,163	0/0:3,0:3:1.55:0,2,4	1/1:2,0:2:5.97:47,6,0	1/1:10,0:10:2.27:18,2,0	1/1:3,19:22:5.78:281,6,0	0/0:16,0:16:48.16:0,48,5116	0/0:14,0:13:11.20:0,11,706	0/0:13,0:13:22.06:0,22,268	0/0:5,0:4:11.73:0,12,165
chr10	101044052	.	TTGTG	T	1367.06	PASS	AB=0.921;AC=16;AF=0.286;AN=56;BaseQRankSum=10.036;DP=830;FS=3.407;HRun=0;HaplotypeScore=211.5733;InbreedingCoeff=0.3339;MQ=60.34;MQ0=13;MQRankSum=-5.472;QD=4.59;ReadPosRankSum=1.884;VQSLOD=2.6355;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,4:24:2.80:167,3,0	0/1:7,0:7:3.52:4,0,64	0/0:39,0:19:14.94:0,15,175	0/0:40,0:24:35.83:0,36,460	0/0:33,0:32:56.57:0,57,1250	0/0:34,0:35:76.40:0,76,1365	0/0:30,0:30:81.26:0,81,1699	0/0:44,0:44:76.68:0,77,935	0/0:26,0:26:14.60:0,15,311	0/0:36,0:36:60.21:0,60,1282	0/0:21,0:21:39.12:0,39,764	1/1:18,4:22:26.16:337,26,0	0/0:32,0:31:69.17:0,69,1347	0/0:38,0:38:88.37:0,88,1653	0/1:24,0:40:54.34:320,0,54	0/1:33,0:33:19.99:20,0,324	0/0:27,0:27:48.10:0,48,858	0/0:19,0:18:43.62:0,44,792	0/1:28,0:28:6.38:6,0,246	0/1:31,0:31:0.67:1,0,368	0/0:51,0:50:44.17:0,44,551	1/1:8,4:12:13.28:164,13,0	1/1:17,9:26:29.77:400,30,0	0/1:16,5:21:6.21:61,0,6	0/0:29,0:28:62.47:0,62,1147	0/1:37,0:38:40.24:40,0,571	0/0:31,0:31:36.21:0,36,506	0/1:13,0:14:16.69:17,0,123
chr10	101044076	.	ATGTGTGTG	A	9968.32	PASS	AB=0.882;AC=26;AF=0.464;AN=56;BaseQRankSum=8.010;DP=827;FS=7.005;HRun=0;HaplotypeScore=266.9690;InbreedingCoeff=0.8681;MQ=49.85;MQ0=12;MQRankSum=-7.166;QD=24.31;ReadPosRankSum=-3.768;VQSLOD=3.0207;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:28:0.24:147,0,0	1/1:0,5:5:8.95:152,9,0	0/0:28,0:8:14.94:0,15,150	0/0:34,0:15:41.94:0,42,455	0/0:33,0:32:63.06:0,63,1808	0/0:28,0:29:76.10:0,76,2125	0/0:31,0:31:78.05:0,78,2243	1/1:15,38:53:31.28:1350,31,0	1/1:21,8:30:60.15:1086,60,0	0/0:31,0:31:78.12:0,78,2103	0/0:20,0:20:42.14:0,42,1101	0/1:21,0:24:0.07:109,0,0	0/0:30,0:29:68.89:0,69,2161	0/0:30,0:32:78.21:0,78,2485	0/0:16,0:40:54.06:0,54,604	1/1:22,14:37:81.02:1610,81,0	0/0:26,0:26:54.13:0,54,1322	0/0:28,0:27:50.09:0,50,1435	1/1:19,4:23:10.32:534,10,0	1/1:22,9:30:39:871,39,0	1/1:54,2:55:53.85:944,54,0	1/1:10,0:14:8.46:92,8,0	1/1:9,0:19:19.25:274,19,0	0/0:18,0:23:0.20:0,0,9	0/0:30,0:28:60.11:0,60,1712	1/1:34,8:42:30.21:1286,30,0	1/1:22,8:30:52.61:910,53,0	1/1:11,5:15:30.04:604,30,0
chr10	101044137	.	A	AGTGT	5329.57	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.881;DP=864;FS=2.400;HRun=0;HaplotypeScore=252.2917;InbreedingCoeff=0.9728;MQ=56.39;MQ0=2;MQRankSum=-11.951;QD=37.53;ReadPosRankSum=-4.237;VQSLOD=3.8820;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:29:50.57:244,51,0	0/0:6,0:6:9.03:0,9,158	0/0:50,0:39:56.73:0,57,1265	0/0:34,0:30:71.69:0,72,1039	0/0:20,0:20:54.66:0,55,938	0/0:27,0:27:66.20:0,66,1120	0/0:20,0:20:57.18:0,57,971	0/0:32,0:32:78.19:0,78,1199	0/0:42,0:41:96.33:0,96,1679	0/0:38,0:38:99:0,111,1902	0/0:25,0:25:69.22:0,69,1160	1/1:12,27:41:99:2446,102,0	0/0:39,0:39:99:0,105,1737	0/0:39,0:39:99:0,99,1604	0/0:46,0:46:99:0,102,1741	0/0:39,0:39:99:0,102,1740	0/0:21,0:21:21.26:0,21,789	0/0:28,0:28:60.20:0,60,1026	0/0:27,0:27:72.18:0,72,1169	0/0:30,0:30:72.25:0,72,1248	0/0:47,0:46:99:0,114,1677	1/1:7,18:26:63.22:1555,63,0	1/1:10,13:23:39.60:889,40,0	1/1:14,9:22:9.30:196,9,0	0/0:22,0:20:60.19:0,60,1006	0/0:38,0:38:99:0,108,1835	0/0:36,0:36:99:0,99,1691	0/0:16,0:16:39.09:0,39,651
chr10	101044174	.	G	GTA	21837.65	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=0.177;DP=888;FS=10.002;HRun=0;HaplotypeScore=175.6615;InbreedingCoeff=0.9976;MQ=57.55;MQ0=1;MQRankSum=-7.903;QD=46.76;ReadPosRankSum=0.268;VQSLOD=4.0930;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,15:24:36.12:692,36,0	1/1:1,5:6:18.06:347,18,0	0/0:37,0:34:93.28:0,93,1366	0/0:35,1:30:84.18:0,84,1108	0/0:25,0:25:69.23:0,69,1049	0/0:33,0:33:93.30:0,93,1397	0/0:21,0:21:63.20:0,63,930	1/1:22,19:41:99:2006,111,0	1/1:7,29:35:99:1884,99,0	0/0:39,0:39:99:0,111,1639	0/0:27,0:27:81.28:0,81,1238	1/1:7,37:44:99:2044,108,0	0/0:38,0:38:99:0,111,1696	0/0:43,0:43:99:0,129,1968	0/0:53,0:53:99:0,147,2207	1/1:5,30:35:99:1885,99,0	0/0:23,0:23:63.16:0,63,887	0/0:26,0:26:69.23:0,69,1044	1/1:14,18:32:90.22:1610,90,0	1/1:9,25:34:96.30:1755,96,0	1/1:16,28:44:99:1840,102,0	1/1:4,23:27:72.25:1373,72,0	1/1:7,18:25:54.64:995,55,0	1/1:3,13:16:17.75:346,18,0	0/0:20,0:19:60.19:0,60,896	1/1:9,39:48:52.55:2388,53,0	1/1:9,35:44:99:2152,114,0	1/1:1,10:11:27.09:521,27,0
chr10	101044227	.	G	GGT	17000.93	PASS	AB=0.951;AC=31;AF=0.554;AN=56;BaseQRankSum=-2.660;DP=962;FS=0.269;HRun=0;HaplotypeScore=171.0452;InbreedingCoeff=0.9142;MQ=55.55;MQ0=4;MQRankSum=-5.241;QD=30.91;ReadPosRankSum=-0.310;VQSLOD=6.1128;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:22:51.17:846,51,0	1/1:1,8:9:27.09:448,27,0	0/1:37,0:29:7.23:7,0,532	0/0:51,0:38:38.45:0,38,760	0/0:24,0:24:60.19:0,60,764	0/0:32,0:32:81.17:0,81,995	0/0:35,0:35:99:0,99,1224	1/1:9,36:46:99:1750,111,0	1/1:5,29:35:72.25:1193,72,0	0/0:34,0:34:84.26:0,84,1060	0/0:29,0:29:75.21:0,75,928	1/1:12,25:37:69.22:1123,69,0	0/0:39,0:39:99:0,99,1246	0/0:38,0:38:99:0,99,1261	0/0:49,0:49:99:0,123,1517	1/1:9,28:38:81.26:1328,81,0	0/0:30,0:30:87.24:0,87,1089	0/0:24,0:25:26.26:0,26,569	1/1:14,20:35:63.46:999,63,0	1/1:7,31:37:84.29:1402,84,0	1/1:13,54:67:99:2200,126,0	1/1:10,22:32:63.22:1049,63,0	1/1:8,23:31:19:861,19,0	1/1:5,24:29:48.16:797,48,0	0/0:26,0:26:69.16:0,69,845	1/1:17,28:44:31.95:1584,32,0	1/1:9,33:43:84.24:1365,84,0	1/1:1,1:2:3.01:48,3,0
chr10	101045143	.	C	CG	3612.04	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=8.696;DP=445;FS=3.185;HRun=1;HaplotypeScore=76.7889;InbreedingCoeff=0.9663;MQ=80.95;MQ0=4;MQRankSum=-0.489;QD=18.24;ReadPosRankSum=-0.648;VQSLOD=3.7100;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:53.18:399,53,0	1/1:9,0:9:14.41:85,14,0	0/0:29,1:17:25.04:0,25,293	0/0:24,0:16:12.80:0,13,171	0/0:20,0:20:44.83:0,45,378	0/0:12,0:12:18.95:0,19,159	0/0:15,0:15:35.56:0,36,264	1/1:20,0:20:51.09:381,51,0	1/1:17,0:17:45.97:363,46,0	0/0:24,0:25:49.02:0,49,464	0/0:26,0:26:64.68:0,65,556	1/1:11,0:11:29.31:220,29,0	0/0:15,0:15:44.82:0,45,361	0/0:15,0:15:35.92:0,36,302	0/0:17,0:17:44.99:0,45,406	1/1:10,1:11:25.49:183,25,0	0/0:24,0:23:53.95:0,54,466	0/0:11,0:11:20.40:0,20,149	1/1:10,1:11:32.89:263,33,0	1/1:22,0:22:50.71:326,51,0	1/1:4,0:4:3.44:27,3,0	1/1:10,1:11:32.16:222,32,0	1/1:14,1:15:41.18:293,41,0	1/1:5,0:5:14.71:109,15,0	0/0:11,0:11:22.07:0,22,219	1/1:14,0:14:26.47:200,26,0	1/1:20,0:20:50.34:348,50,0	1/1:9,0:9:26.56:192,27,0
chr10	101045144	.	G	GGC	6982.50	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-2.465;DP=462;FS=2.450;HRun=0;HaplotypeScore=79.6810;InbreedingCoeff=0.9756;MQ=79.03;MQ0=5;MQRankSum=-0.012;QD=35.44;ReadPosRankSum=-0.624;VQSLOD=6.8192;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:20:57.13:792,57,0	1/1:1,7:8:14.84:163,15,0	0/0:28,0:17:13.48:0,13,460	0/0:28,0:17:20.12:0,20,266	0/0:19,0:23:45.15:0,45,680	0/0:9,0:12:27.06:0,27,371	0/0:10,0:17:39.09:0,39,534	1/1:5,14:21:61.19:805,61,0	1/1:15,0:17:50.76:739,51,0	0/0:17,0:23:54.16:0,54,807	0/0:24,0:28:66.22:0,66,979	1/1:7,0:10:29.78:393,30,0	0/0:14,0:16:45.15:0,45,665	0/0:16,0:16:36.12:0,36,549	0/0:6,0:16:45.15:0,45,629	1/1:9,0:9:26.88:330,27,0	0/0:27,0:27:54.17:0,54,809	0/0:12,0:12:23.44:0,23,306	1/1:2,10:12:36.05:553,36,0	1/1:4,18:23:37.85:579,38,0	1/1:3,0:4:5.81:64,6,0	1/1:8,1:11:33.01:417,33,0	1/1:12,0:15:42.07:548,42,0	1/1:3,0:5:15.02:212,15,0	0/0:12,0:15:26.96:0,27,379	1/1:2,0:13:26.55:370,27,0	1/1:19,0:20:52.77:689,53,0	1/1:7,0:9:27.01:329,27,0
chr10	101045459	.	T	TC	18213.27	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-17.151;DP=730;FS=0.565;HRun=0;HaplotypeScore=67.0953;InbreedingCoeff=0.9984;MQ=84.77;MQ0=0;MQRankSum=-6.181;QD=44.42;ReadPosRankSum=1.335;VQSLOD=5.2684;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,42:43:99:1918,120,0	1/1:0,13:13:36.12:576,36,0	0/0:26,0:26:75.20:0,75,992	0/0:21,0:21:18.35:0,18,635	0/0:33,0:33:96.30:0,96,1324	0/0:31,0:31:87.29:0,87,1217	0/0:24,0:24:69.20:0,69,929	1/1:0,44:44:99:2105,132,0	1/1:0,23:23:62.90:1007,63,0	0/0:32,0:32:96.31:0,96,1322	0/0:26,0:26:75.23:0,75,1029	1/1:0,29:29:72.25:1151,72,0	0/0:28,0:28:84.26:0,84,1143	0/0:17,0:17:48.16:0,48,670	0/0:19,0:19:57.18:0,57,780	1/1:0,27:26:66.23:1055,66,0	0/0:25,0:25:69.23:0,69,961	0/0:18,0:18:54.18:0,54,755	1/1:0,19:19:57.19:909,57,0	1/1:1,27:28:72.25:1149,72,0	1/1:2,32:34:96.33:1535,96,0	1/1:1,27:28:78.27:1245,78,0	1/1:0,25:25:72.25:1150,72,0	1/1:0,32:32:96.33:1535,96,0	0/0:20,0:20:57.19:0,57,797	1/1:1,25:26:36.29:1157,36,0	1/1:1,31:32:87.30:1387,87,0	1/1:0,7:7:21.07:336,21,0
chr10	101045646	.	AT	A	7280.54	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=16.307;DP=598;FS=4.831;HRun=8;HaplotypeScore=96.0886;InbreedingCoeff=0.9704;MQ=78.47;MQ0=0;MQRankSum=-3.179;QD=23.34;ReadPosRankSum=1.530;VQSLOD=5.2474;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.21:0,69,833	1/1:0,11:11:30.05:290,30,0	0/0:19,0:19:2.29:0,2,442	0/0:12,1:14:17.27:0,17,219	0/0:26,0:26:72.21:0,72,854	0/0:34,0:34:99:0,102,1209	0/0:16,0:16:42.12:0,42,496	1/1:5,20:25:56.98:521,57,0	1/1:5,16:21:48.07:464,48,0	0/0:21,0:21:54.16:0,54,642	0/0:24,0:24:69.21:0,69,833	1/1:5,27:32:75.06:715,75,0	0/0:21,1:22:37.23:0,37,688	0/0:15,0:15:39.12:0,39,471	0/0:19,0:19:48.14:0,48,571	1/1:4,26:30:66.10:637,66,0	0/0:19,0:19:51.16:0,51,616	0/0:14,0:14:21.54:0,22,255	1/1:5,14:19:42.07:406,42,0	1/1:5,22:27:63.04:599,63,0	1/1:0,19:19:57.09:550,57,0	1/1:3,27:30:78.12:753,78,0	1/1:3,25:28:72.11:695,72,0	1/1:0,10:10:30.05:290,30,0	0/0:19,0:19:51.14:0,51,605	1/1:3,22:25:63.10:608,63,0	1/1:5,24:29:59.98:579,60,0	1/1:0,6:6:18.03:174,18,0
chr10	101045878	.	AG	A	10577.15	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=13.864;DP=647;FS=4.484;HRun=5;HaplotypeScore=81.2443;InbreedingCoeff=0.9987;MQ=85.36;MQ0=0;MQRankSum=-2.992;QD=29.88;ReadPosRankSum=1.664;VQSLOD=5.5439;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,49:53:99:1633,144,0	1/1:1,10:11:30.09:340,30,0	0/0:25,0:25:60.13:0,60,757	0/0:18,0:18:38.95:0,39,452	0/0:17,0:17:48.15:0,48,641	0/0:19,0:19:51.17:0,51,698	0/0:26,0:26:72.18:0,72,946	1/1:1,30:31:87.25:985,87,0	1/1:1,21:22:57.16:647,57,0	0/0:16,0:15:45.15:0,45,615	0/0:10,0:9:21.07:0,21,287	1/1:0,27:27:75.21:851,75,0	0/0:29,0:29:81.23:0,81,1087	0/0:30,0:30:81.27:0,81,1100	0/0:28,0:28:78.25:0,78,1051	1/1:2,24:26:60.17:680,60,0	0/0:27,0:27:78.26:0,78,1067	0/0:31,0:31:90.28:0,90,1210	1/1:1,14:15:42.12:474,42,0	1/1:2,11:13:33.09:374,33,0	1/1:3,41:44:99:1327,117,0	1/1:0,18:18:45.13:510,45,0	1/1:0,17:17:39.11:442,39,0	1/1:3,25:28:72.20:817,72,0	0/0:17,0:17:48.15:0,48,641	1/1:1,21:22:63.18:714,63,0	1/1:3,17:20:48.14:544,48,0	1/1:0,7:7:21.06:238,21,0
chr10	101046156	.	AACTACT	A	5113.51	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=7.018;DP=571;FS=5.646;HRun=0;HaplotypeScore=145.3104;InbreedingCoeff=0.7266;MQ=67.19;MQ0=9;MQRankSum=-0.711;QD=18.80;ReadPosRankSum=3.555;VQSLOD=4.1219;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:1.31:0,1,15	1/1:7,0:6:12.04:182,12,0	0/0:23,0:16:12.01:0,12,142	0/0:22,0:21:2.74:0,3,240	0/0:5,0:5:6.02:0,6,96	0/0:19,0:19:27.09:0,27,439	0/0:36,0:36:11.08:0,11,901	1/1:9,10:15:24.07:368,24,0	1/1:19,0:19:29.09:376,29,0	0/0:21,0:19:41.34:0,41,657	0/0:5,0:5:3.01:0,3,50	1/1:36,0:40:39.53:485,40,0	0/0:29,0:29:60.19:0,60,1312	0/0:37,0:36:81.28:0,81,1763	0/0:20,0:34:9.02:0,9,165	1/1:21,0:21:37.02:498,37,0	0/0:20,0:20:48.11:0,48,1114	0/0:12,0:12:21.07:0,21,398	1/1:10,6:16:18.06:265,18,0	1/1:11,0:11:12.04:189,12,0	1/1:34,0:31:57.14:847,57,0	1/1:11,0:10:6.02:99,6,0	1/1:8,0:8:9.03:124,9,0	1/1:34,0:34:51.27:640,51,0	0/0:11,0:11:24.08:0,24,407	1/1:10,9:19:27.08:413,27,0	0/1:20,0:20:6.57:388,0,7	0/1:13,0:13:60.63:238,0,61
chr10	101046239	.	CTGT	C	354.03	PASS	AB=0.885;AC=9;AF=0.161;AN=56;BaseQRankSum=6.013;DP=584;FS=6.903;HRun=0;HaplotypeScore=160.5500;InbreedingCoeff=-0.1118;MQ=41.75;MQ0=34;MQRankSum=-5.733;QD=2.16;ReadPosRankSum=-5.155;VQSLOD=0.1415;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,2:18:3.01:0,3,46	0/1:7,1:7:7.35:7,0,20	0/0:32,0:11:29.25:0,29,423	0/0:34,0:8:24.08:0,24,457	0/0:7,0:7:8.98:0,9,158	0/0:20,2:19:42.14:0,42,950	0/0:47,0:42:99:0,117,2507	0/0:26,0:11:29.93:0,30,360	0/1:25,8:30:41.98:42,0,502	0/0:16,0:16:48.16:0,48,1028	0/0:9,0:8:21.07:0,21,409	0/1:23,9:28:40.83:90,0,41	0/0:33,0:32:87.03:0,87,1800	0/0:33,0:33:93.31:0,93,1960	0/0:33,1:30:21.51:0,22,1297	0/1:15,13:27:99:160,0,129	0/0:18,0:18:13.11:0,13,816	0/0:9,0:9:2.13:0,2,383	0/1:7,0:6:24.81:25,0,90	0/1:14,0:13:0.57:1,0,129	0/0:27,0:21:8.55:0,9,208	0/0:4,1:4:0:0,0,0	0/0:5,1:5:0:0,0,0	0/0:16,7:21:2.89:0,3,68	0/0:18,0:18:45.15:0,45,915	0/1:15,0:14:3.17:3,0,373	0/1:12,2:13:32.58:83,0,33	0/1:12,1:12:66.37:66,0,176
chr10	101046301	.	GCTA	G	888.81	PASS	AB=0.888;AC=11;AF=0.196;AN=56;BaseQRankSum=5.764;DP=887;FS=23.810;HRun=0;HaplotypeScore=174.1847;InbreedingCoeff=-0.2576;MQ=40.53;MQ0=120;MQRankSum=-2.484;QD=2.61;ReadPosRankSum=-0.564;VQSLOD=0.4879;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:24:10.75:0,11,65	0/1:10,1:7:29.70:30,0,48	0/0:45,0:3:8.69:0,9,73	0/1:59,0:6:6.89:7,0,50	0/0:19,0:15:18.03:0,18,360	0/0:30,0:23:48.15:0,48,900	0/0:39,0:30:42.14:0,42,833	0/0:74,0:23:27.01:0,27,427	0/1:41,4:42:99:131,0,101	0/0:46,0:31:72.23:0,72,1336	0/0:20,0:16:30.03:0,30,521	0/1:35,5:38:83.97:104,0,84	0/0:34,0:33:81.23:0,81,1448	0/0:32,0:30:78.05:0,78,1322	0/0:31,1:29:19.02:0,19,1050	0/1:27,1:24:19.25:19,0,105	0/0:21,0:21:46.73:0,47,889	0/0:24,0:24:31.24:0,31,998	0/0:6,1:5:1.92:0,2,39	0/1:23,2:22:47.71:127,0,48	0/1:37,2:27:46.20:46,0,134	0/1:18,5:16:27.57:28,0,43	0/0:19,2:17:14.01:0,14,68	0/0:37,3:37:52.86:0,53,272	0/0:30,0:25:65.95:0,66,1193	0/1:31,6:23:89.20:213,0,89	0/1:17,5:21:78.08:148,0,78	0/1:7,5:12:39.31:181,0,39
chr10	101046466	.	A	ACTG	5092.60	PASS	AB=0.707;AC=26;AF=0.464;AN=56;BaseQRankSum=-4.126;DP=792;FS=5.606;HRun=0;HaplotypeScore=103.7742;InbreedingCoeff=0.7060;MQ=41.90;MQ0=78;MQRankSum=0.096;QD=14.39;ReadPosRankSum=3.138;VQSLOD=4.1549;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,5:17:9.55:144,0,10	0/1:5,4:6:8.33:135,0,8	0/0:50,0:11:32.73:0,33,327	0/0:69,0:9:20.67:0,21,212	0/0:15,0:13:33.08:0,33,495	0/0:34,0:29:63.17:0,63,972	0/0:42,0:33:69.17:0,69,1051	1/1:32,1:5:3.48:48,3,0	1/1:10,33:35:18.06:414,18,0	0/0:40,0:32:86:0,86,1212	0/0:11,0:7:12:0,12,152	1/1:9,22:28:15.01:314,15,0	0/0:37,0:37:99:0,108,1647	0/0:34,0:33:99:0,99,1486	0/0:32,0:32:60.18:0,60,964	1/1:20,16:28:45.14:983,45,0	0/0:23,0:23:63.67:0,64,1018	0/0:22,0:22:39.50:0,39,811	0/1:3,2:3:31.29:129,0,31	1/1:9,5:12:17.99:277,18,0	1/1:28,9:23:30.06:556,30,0	1/1:12,4:12:12:155,12,0	1/1:7,11:16:6.02:138,6,0	1/1:11,3:13:23.98:325,24,0	0/0:29,0:22:45.11:0,45,677	1/1:11,25:29:28.44:784,28,0	1/1:4,15:17:20.85:433,21,0	0/1:4,10:13:1.95:255,0,2
chr10	101046502	.	GCTACTA	G	1074.61	PASS	AB=0.917;AC=18;AF=0.375;AN=48;BaseQRankSum=8.210;DP=705;FS=0.000;HRun=0;HaplotypeScore=119.4768;InbreedingCoeff=0.4299;MQ=38.01;MQ0=103;MQRankSum=-4.874;QD=3.76;ReadPosRankSum=-1.395;VQSLOD=1.6203;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,7:17:0.16:0,0,0	0/1:10,1:8:16.96:17,0,59	./.	0/0:50,0:5:0:0,0,0	0/0:11,0:10:15.04:0,15,322	0/0:27,0:22:42.14:0,42,1179	0/0:37,0:28:57.17:0,57,1355	0/1:34,0:9:29.05:29,0,88	1/1:21,18:30:11.97:190,12,0	0/0:40,0:29:78.20:0,78,2051	0/0:16,0:9:18.03:0,18,325	1/1:16,14:26:14.97:271,15,0	0/0:33,0:33:78.04:0,78,1957	0/0:29,0:28:66.20:0,66,1602	0/0:25,0:25:45.05:0,45,1304	1/1:12,18:21:5.96:70,6,0	0/0:22,0:22:11.38:0,11,979	0/0:21,0:21:41.76:0,42,1068	0/1:13,3:8:23.63:109,0,24	0/1:12,1:10:0:0,0,0	0/1:32,1:20:5.56:13,0,6	./.	./.	./.	0/0:29,0:21:48.04:0,48,1299	0/1:26,6:18:86.77:263,0,87	1/1:7,6:11:8.98:141,9,0	1/1:3,3:4:9.01:129,9,0
chr10	101046533	.	CTAT	C	39.52	PASS	AB=0.994;AC=12;AF=0.231;AN=52;BaseQRankSum=7.228;DP=567;FS=4.094;HRun=0;HaplotypeScore=108.4604;InbreedingCoeff=0.1462;MQ=41.06;MQ0=59;MQRankSum=-5.266;QD=0.21;ReadPosRankSum=-5.942;VQSLOD=0.1019;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,2:14:0.38:1,0,0	0/1:9,0:8:10.06:10,0,106	./.	./.	0/0:10,0:9:24.08:0,24,545	0/0:25,0:24:66.15:0,66,1133	0/0:26,0:23:60.01:0,60,1021	0/1:26,1:14:11.12:11,0,481	0/1:38,0:29:38.30:38,0,115	0/0:43,0:37:99:0,108,2040	0/0:13,0:9:24.07:0,24,488	0/1:29,0:25:3.05:3,0,140	0/0:27,0:27:72.18:0,72,1406	0/0:26,0:26:78.22:0,78,1506	0/1:22,0:21:9.30:9,0,556	0/0:30,0:19:1.05:0,1,11	0/0:22,2:24:44.61:0,45,1050	0/0:16,0:16:29.45:0,29,845	0/0:14,0:7:6.12:0,6,138	0/0:6,0:4:3.01:0,3,60	1/1:21,4:16:5.69:50,6,0	0/1:8,0:7:12.98:13,0,54	0/0:8,0:5:0:0,0,0	0/0:17,0:12:6.02:0,6,112	0/0:26,0:25:72.15:0,72,1449	0/0:18,0:11:8.67:0,9,107	0/0:11,0:8:7.71:0,8,41	1/1:7,0:5:2.27:30,2,0
chr10	101046550	.	G	GCTA	3178.82	PASS	AB=0.925;AC=27;AF=0.519;AN=52;BaseQRankSum=1.803;DP=572;FS=13.283;HRun=0;HaplotypeScore=102.1586;InbreedingCoeff=0.7232;MQ=41.87;MQ0=54;MQRankSum=-4.399;QD=11.43;ReadPosRankSum=-5.455;VQSLOD=0.6534;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:15:0:0,0,0	1/1:3,6:8:6.02:82,6,0	./.	./.	0/0:10,0:8:21.07:0,21,299	0/0:17,0:15:36.12:0,36,496	0/0:31,0:22:36.12:0,36,501	0/1:32,0:10:38.74:39,0,57	1/1:19,14:27:27.08:468,27,0	0/0:39,0:31:75.24:0,75,1048	0/0:15,0:11:27.09:0,27,382	1/1:20,8:26:35.93:631,36,0	0/0:27,0:27:66.19:0,66,889	0/0:30,0:30:77.90:0,78,1006	0/0:21,0:26:19.24:0,19,374	1/1:21,8:22:27.07:408,27,0	0/0:20,0:20:21.91:0,22,493	0/0:15,0:15:26.57:0,27,336	1/1:10,3:8:18.01:269,18,0	1/1:3,2:3:3.01:61,3,0	1/1:21,4:18:3.01:51,3,0	1/1:5,5:9:12.04:211,12,0	1/1:9,3:8:6.02:109,6,0	1/1:7,11:14:11.93:216,12,0	0/0:26,0:25:63.17:0,63,839	0/1:17,7:17:9.66:449,0,10	1/1:11,4:12:12.02:172,12,0	1/1:5,0:4:12.04:208,12,0
chr10	101046581	.	CTAT	C	35.37	PASS	AB=1.000;AC=6;AF=0.111;AN=54;BaseQRankSum=6.871;DP=636;FS=2.778;HRun=0;HaplotypeScore=103.8931;InbreedingCoeff=0.1755;MQ=43.89;MQ0=81;MQRankSum=-6.054;QD=0.24;ReadPosRankSum=-5.501;VQSLOD=0.6193;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:12,1:11:0:0,0,0	0/0:14,0:13:24.07:0,24,465	1/1:28,0:1:2.98:21,3,0	./.	0/0:16,0:12:36.11:0,36,747	0/0:19,0:17:50.98:0,51,906	0/0:23,1:16:38.98:0,39,678	0/0:29,0:4:12.02:0,12,222	0/1:39,0:34:80.58:81,0,463	0/0:30,0:25:69.07:0,69,1137	0/0:18,0:15:42.06:0,42,707	0/1:22,0:21:27.43:27,0,676	0/0:26,0:26:76.06:0,76,1456	0/0:34,0:34:75.59:0,76,1858	0/1:33,0:33:10.34:10,0,597	0/0:30,1:30:15.73:0,16,960	0/0:18,0:18:40.23:0,40,709	0/0:16,0:16:35.55:0,36,588	0/0:9,0:8:15.05:0,15,325	0/0:17,0:14:35.80:0,36,392	0/1:26,0:21:9:9,0,353	0/0:17,0:16:3.11:0,3,608	0/0:23,0:16:24.20:0,24,448	0/0:23,1:19:33:0,33,581	0/0:30,0:30:87.12:0,87,1489	0/0:27,0:21:36.21:0,36,958	0/0:18,0:15:27.09:0,27,564	0/0:6,0:5:15.05:0,15,320
chr10	101046598	.	G	GCTACTA	266.73	PASS	AB=0.863;AC=3;AF=0.054;AN=56;BaseQRankSum=0.562;DP=706;FS=2.691;HRun=0;HaplotypeScore=139.6814;InbreedingCoeff=0.1472;MQ=45.01;MQ0=71;MQRankSum=-1.904;QD=4.10;ReadPosRankSum=-2.804;VQSLOD=2.2001;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:9:0:0,0,0	0/0:15,0:14:27.08:0,27,505	0/0:35,0:3:8.95:0,9,70	0/0:46,0:1:3.01:0,3,36	0/0:13,0:11:18.06:0,18,361	0/0:22,0:20:39.08:0,39,671	0/0:21,0:14:21.04:0,21,326	0/0:28,0:7:5.95:0,6,43	0/0:39,0:36:47.94:0,48,726	0/0:32,0:27:54.17:0,54,933	0/0:19,0:18:33.06:0,33,602	0/0:25,0:25:39.03:0,39,723	0/0:32,0:32:59.63:0,60,1242	0/0:33,0:33:69.14:0,69,1255	0/1:16,18:36:99:341,0,254	0/0:35,0:33:65.88:0,66,1057	0/0:20,0:20:30.06:0,30,463	0/0:10,0:12:17.99:0,18,486	0/0:15,0:10:17.87:0,18,274	0/1:17,0:16:2.99:3,0,395	0/0:25,0:21:24.08:0,24,482	0/0:25,0:25:50.05:0,50,848	0/0:24,0:17:38.90:0,39,617	0/0:26,0:22:29.97:0,30,602	0/0:28,0:29:51.12:0,51,906	0/0:33,0:28:54.11:0,54,911	0/0:22,0:19:38.90:0,39,596	0/0:13,0:11:33.03:0,33,520
chr10	101046628	.	ATTG	A	167.40	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=4.656;DP=740;FS=13.586;HRun=0;HaplotypeScore=128.7761;InbreedingCoeff=0.6245;MQ=53.77;MQ0=17;MQRankSum=-3.923;QD=5.07;ReadPosRankSum=-3.124;VQSLOD=1.1151;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,4:13:21.05:249,21,0	0/0:10,0:10:30.10:0,30,714	0/0:50,0:25:74.56:0,75,1081	0/0:42,0:11:29.73:0,30,376	0/0:17,0:17:51.16:0,51,965	0/0:24,0:24:72.25:0,72,1438	0/0:14,0:14:42.13:0,42,764	0/0:21,0:12:27.09:0,27,494	0/0:34,0:32:71.77:0,72,1314	0/0:35,1:34:99:0,102,2055	0/0:24,0:24:72.25:0,72,1429	0/0:31,0:30:75.18:0,75,1330	0/0:36,0:36:99:0,107,2100	0/0:28,0:28:84.26:0,84,1667	0/0:42,2:44:56.04:0,56,788	0/0:35,0:31:77.88:0,78,1506	0/1:19,0:19:22.76:23,0,829	0/0:17,0:17:48.31:0,48,873	0/0:21,0:19:47.37:0,47,900	0/0:23,0:23:37.25:0,37,1014	0/0:16,0:15:33.11:0,33,731	0/0:32,0:32:65.25:0,65,1649	0/0:27,0:26:72.16:0,72,1297	0/0:20,0:20:10.37:0,10,889	0/0:28,0:28:80.75:0,81,1594	0/0:39,0:38:99:0,102,1998	0/0:22,0:21:50.97:0,51,976	0/0:16,0:15:43.88:0,44,756
chr10	101046675	.	TA	T	6952.86	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=9.509;DP=589;FS=16.543;HRun=8;HaplotypeScore=80.1708;InbreedingCoeff=0.9902;MQ=68.22;MQ0=1;MQRankSum=-4.840;QD=22.57;ReadPosRankSum=-0.877;VQSLOD=3.4258;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:25:63.10:608,63,0	1/1:0,7:7:21.03:203,21,0	0/0:19,0:19:27.07:0,27,302	0/0:14,0:14:30.04:0,30,322	0/0:21,0:21:60.18:0,60,725	0/0:23,0:23:66.19:0,66,783	0/0:15,0:14:36.09:0,36,422	1/1:1,26:27:78.12:753,78,0	1/1:8,20:27:51.06:492,51,0	0/0:26,0:26:72.21:0,72,858	0/0:23,0:23:57.17:0,57,689	1/1:2,19:20:44.99:417,45,0	0/0:27,0:27:72.21:0,72,858	0/0:14,0:14:36.05:0,36,403	0/0:22,0:22:51.16:0,51,616	1/1:5,16:17:30.04:290,30,0	0/0:26,0:25:66.19:0,66,784	0/0:19,0:19:48.11:0,48,564	1/1:2,15:17:39.06:377,39,0	1/1:4,17:21:51.08:493,51,0	1/1:1,14:15:36.06:348,36,0	1/1:2,22:24:66.09:631,66,0	1/1:1,23:24:59.75:570,60,0	1/1:2,19:21:54.03:512,54,0	0/0:32,0:30:78.24:0,78,942	1/1:2,28:30:8.65:652,9,0	1/1:0,11:11:24.04:232,24,0	1/1:1,13:14:39.06:376,39,0
chr10	101047575	.	TGG	T	3675.21	PASS	AB=0.923;AC=29;AF=0.518;AN=56;BaseQRankSum=15.247;DP=537;FS=5.300;HRun=2;HaplotypeScore=93.3032;InbreedingCoeff=0.8999;MQ=73.12;MQ0=1;MQRankSum=-15.100;QD=15.44;ReadPosRankSum=-4.028;VQSLOD=-0.5110;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:47.96:405,48,0	1/1:7,0:7:17.19:84,17,0	0/0:26,0:21:40.69:0,41,626	0/0:14,0:11:26.96:0,27,339	0/0:41,0:41:99:0,120,1957	0/0:18,0:18:54.18:0,54,898	0/0:20,0:20:57.19:0,57,908	1/1:16,3:17:25.80:250,26,0	1/1:15,3:17:40.39:282,40,0	0/0:13,0:13:39.13:0,39,640	0/0:23,0:23:69.23:0,69,1113	1/1:7,1:8:15.78:107,16,0	0/0:18,0:18:51.12:0,51,836	0/0:27,0:27:81.18:0,81,1276	0/0:20,0:20:57.19:0,57,948	0/1:11,1:12:38.95:86,0,39	0/0:27,0:27:81.28:0,81,1345	0/0:31,0:31:90.22:0,90,1390	1/1:11,3:14:39.22:361,39,0	1/1:24,3:26:62.72:427,63,0	1/1:4,0:4:5.65:31,6,0	1/1:15,0:13:25.40:179,25,0	1/1:13,2:13:35.74:354,36,0	1/1:8,1:8:8.31:63,8,0	0/0:20,0:20:60.20:0,60,970	1/1:16,1:16:37.79:289,38,0	1/1:35,2:36:80.58:520,81,0	1/1:8,1:9:22.83:236,23,0
chr10	101047576	.	GGT	G	962.04	PASS	AB=0.984;AC=14;AF=0.250;AN=56;BaseQRankSum=6.036;DP=546;FS=5.970;HRun=0;HaplotypeScore=103.6837;InbreedingCoeff=-0.0313;MQ=72.87;MQ0=1;MQRankSum=-3.690;QD=4.04;ReadPosRankSum=-5.935;VQSLOD=-0.5482;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:48.16:781,48,0	0/0:7,0:7:9.08:0,9,74	0/0:27,0:21:29.50:0,29,788	0/0:14,0:11:26.32:0,26,357	0/0:40,0:40:99:0,120,2295	0/0:20,0:20:57.18:0,57,1096	0/0:19,0:19:57.17:0,57,1093	0/1:22,0:20:32.26:32,0,136	0/1:17,0:17:17.85:18,0,111	0/0:13,0:13:39.13:0,39,761	0/0:23,0:23:69.20:0,69,1279	0/1:8,0:8:3.39:3,0,75	0/0:17,0:17:48.16:0,48,973	0/0:25,0:25:75.22:0,75,1443	0/0:20,0:20:57.20:0,57,1135	0/1:12,0:12:22.62:23,0,56	0/0:28,0:28:84.22:0,84,1514	0/0:29,0:29:84.19:0,84,1539	0/1:14,0:16:52.93:70,0,53	0/1:31,0:30:8.97:9,0,225	0/0:5,0:5:4.30:0,4,18	0/1:16,0:14:12.39:12,0,132	0/1:14,0:12:14.45:93,0,14	0/1:9,0:8:7.26:7,0,39	0/0:21,0:21:63.22:0,63,1231	0/1:18,0:17:7.69:8,0,112	0/1:37,0:37:3.02:3,0,306	0/1:9,0:9:0.20:55,0,0
chr10	101047581	.	T	TTTTTTG	5671.05	PASS	AB=0.914;AC=23;AF=0.411;AN=56;BaseQRankSum=11.411;DP=557;FS=3.469;HRun=0;HaplotypeScore=171.0705;InbreedingCoeff=0.6586;MQ=72.74;MQ0=1;MQRankSum=-13.543;QD=24.34;ReadPosRankSum=-8.459;VQSLOD=2.4890;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:51.16:0,51,933	1/1:8,0:8:23.31:244,23,0	0/0:25,0:20:20.07:0,20,724	0/0:14,0:11:24.45:0,24,402	0/0:40,0:40:99:0,114,2611	0/0:21,0:21:60.14:0,60,1260	0/0:21,0:21:60.17:0,60,1294	1/1:24,0:22:55.13:608,55,0	1/1:17,0:17:47.38:457,47,0	0/0:15,0:15:42.13:0,42,898	0/0:22,0:22:66.19:0,66,1411	0/1:9,0:9:60.30:60,0,88	0/0:17,0:17:51.15:0,51,1117	0/0:25,0:25:75.21:0,75,1608	0/0:21,0:21:60.18:0,60,1290	0/1:3,7:12:60.93:124,0,61	0/0:24,0:24:69.22:0,69,1544	0/0:28,0:28:78.22:0,78,1724	1/1:16,0:19:53.96:670,54,0	1/1:31,0:32:88.42:823,88,0	1/1:5,0:5:8.96:85,9,0	0/1:17,0:15:62.91:290,0,63	0/1:13,0:11:24.83:201,0,25	0/1:10,0:9:0.34:143,0,0	0/0:22,0:22:63.17:0,63,1379	1/1:17,0:17:45.93:472,46,0	1/1:35,0:36:98.73:1167,99,0	1/1:10,0:10:25.41:325,25,0
chr10	101047943	.	TATAC	T	6268.48	PASS	AB=0.769;AC=43;AF=0.977;AN=44;BaseQRankSum=-0.359;DP=698;FS=3.284;HRun=0;HaplotypeScore=187.9237;InbreedingCoeff=-0.0447;MQ=63.60;MQ0=0;MQRankSum=0.528;QD=11.23;ReadPosRankSum=1.669;VQSLOD=4.4571;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:11,17:28:33.08:482,33,0	1/1:20,16:36:45.15:692,45,0	0/1:7,3:10:33.86:83,0,34	./.	1/1:32,0:32:8.98:77,9,0	1/1:17,18:35:51.16:760,51,0	1/1:9,16:25:36.08:525,36,0	1/1:26,0:26:24.39:206,24,0	1/1:21,14:36:36.12:535,36,0	1/1:16,10:26:27.09:415,27,0	1/1:13,7:21:18.06:277,18,0	1/1:24,0:24:8.94:68,9,0	1/1:10,10:20:21.07:323,21,0	1/1:13,9:22:18.02:250,18,0	1/1:21,0:21:6.01:56,6,0	1/1:23,0:23:20.90:171,21,0	./.	1/1:24,0:23:9.01:84,9,0	1/1:24,0:23:12.01:112,12,0	1/1:15,0:15:8.87:66,9,0	1/1:10,17:27:33.11:507,33,0	1/1:30,1:31:31.77:282,32,0	1/1:36,0:35:23.97:213,24,0	1/1:16,0:16:9.01:83,9,0
chr10	101047975	.	CATACATACATACATACATATTAT	C	11372.93	PASS	AB=0.811;AC=23;AF=0.411;AN=56;BaseQRankSum=9.213;DP=727;FS=5.496;HRun=0;HaplotypeScore=356.4704;InbreedingCoeff=0.5831;MQ=54.39;MQ0=19;MQRankSum=-7.987;QD=32.97;ReadPosRankSum=0.538;VQSLOD=2.3543;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:9.03:0,9,198	1/1:4,0:4:9.03:284,9,0	0/0:31,0:9:15.91:0,16,265	0/0:32,0:7:21.07:0,21,461	0/0:35,0:34:87.08:0,87,4432	0/0:38,0:38:99:0,105,5512	0/0:10,0:10:27.09:0,27,1063	1/1:36,0:35:81.27:1799,81,0	1/1:2,31:33:9:561,9,0	0/0:36,0:36:99:0,108,6062	0/0:28,0:27:72.25:0,72,3979	0/1:28,0:28:37.69:38,0,183	0/0:31,0:31:78.25:0,78,4086	0/0:24,0:24:69.19:0,69,3653	0/0:22,0:22:60.12:0,60,2800	1/1:1,27:28:9.03:552,9,0	0/0:24,0:23:57.19:0,57,2969	0/0:16,0:16:39.13:0,39,2122	1/1:2,22:24:56.37:1425,56,0	0/1:2,30:32:18.30:1409,0,18	1/1:12,0:12:11.18:313,11,0	0/1:17,0:17:17.81:18,0,147	1/1:36,0:35:13.54:79,14,0	0/1:13,0:13:90.97:91,0,223	0/0:32,0:32:78.27:0,78,4428	0/1:5,31:36:99:2619,0,137	1/1:3,36:39:27.09:1571,27,0	1/1:1,6:7:12.04:615,12,0
chr10	101047983	.	CATACATACATATTAT	C	10170.91	PASS	AB=0.929;AC=26;AF=0.481;AN=54;BaseQRankSum=9.223;DP=723;FS=4.118;HRun=0;HaplotypeScore=278.9243;InbreedingCoeff=0.7970;MQ=57.03;MQ0=18;MQRankSum=-8.153;QD=30.45;ReadPosRankSum=0.488;VQSLOD=3.7996;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:5,0:5:8.39:113,8,0	0/0:33,0:10:24.41:0,24,376	0/0:32,0:7:18.06:0,18,307	0/0:37,0:37:99:0,99,3178	0/0:36,0:36:99:0,102,3541	0/0:10,0:10:24.08:0,24,790	1/1:29,0:28:78.27:1799,78,0	1/1:32,0:32:8.69:335,9,0	0/0:38,0:38:99:0,111,4058	0/0:27,0:26:66.23:0,66,2287	1/1:3,25:28:27.09:1077,27,0	0/0:31,0:31:75.17:0,75,2660	0/0:23,0:23:63.22:0,63,2190	0/0:25,0:25:66.04:0,66,1960	1/1:27,0:27:9.03:326,9,0	0/0:25,0:24:60.20:0,60,2036	0/0:17,0:17:39.08:0,39,1265	1/1:24,0:24:59.18:1288,59,0	1/1:31,0:31:23.44:782,23,0	1/1:11,0:11:6.57:22,7,0	1/1:0,24:24:14.97:440,15,0	1/1:1,35:35:14.67:570,15,0	0/1:10,2:12:25.71:419,0,26	0/0:36,0:36:87.28:0,87,3105	0/1:32,0:32:59.38:1691,0,59	1/1:36,0:35:27.09:969,27,0	1/1:7,0:7:9.50:342,10,0
chr10	101047987	.	C	CACA	689.54	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=7.667;DP=713;FS=0.000;HRun=0;HaplotypeScore=201.5503;InbreedingCoeff=0.0344;MQ=57.48;MQ0=18;MQRankSum=-7.364;QD=3.19;ReadPosRankSum=2.106;VQSLOD=2.4214;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:0:0,0,0	0/0:4,0:4:3.01:0,3,47	0/0:32,0:11:27.44:0,27,362	0/0:29,0:7:21.03:0,21,296	0/0:36,0:36:84.15:0,84,1183	0/0:35,0:35:96.26:0,96,1345	0/0:9,0:9:21.05:0,21,318	0/0:29,0:28:81.14:0,81,1327	0/1:32,0:32:14.05:53,0,14	0/0:39,0:39:99:0,117,1622	0/0:27,0:26:63.09:0,63,796	0/0:25,0:25:22.75:0,23,188	0/0:30,0:30:77.95:0,78,1059	0/0:24,0:24:60.14:0,60,816	0/0:23,0:23:51.15:0,51,759	0/1:27,0:27:21.14:92,0,21	0/0:28,0:27:63.14:0,63,883	0/0:19,0:19:42.06:0,42,583	0/1:24,0:24:23.49:23,0,522	0/1:31,0:31:16.99:210,0,17	1/1:8,3:11:2.93:35,3,0	0/0:24,0:24:8.91:0,9,61	0/0:36,0:35:11.12:0,11,79	0/0:11,1:13:13.17:0,13,145	0/0:35,0:35:87.24:0,87,1253	0/1:32,0:32:99:233,0,462	0/1:36,0:35:90.80:141,0,91	0/1:6,0:6:13.72:38,0,14
chr10	101047991	.	CATATTAT	C	6904.62	PASS	AC=26;AF=0.481;AN=54;BaseQRankSum=10.545;DP=713;FS=1.772;HRun=0;HaplotypeScore=214.9340;InbreedingCoeff=0.9080;MQ=60.54;MQ0=18;MQRankSum=-8.202;QD=21.58;ReadPosRankSum=1.079;VQSLOD=4.2876;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,0:3:3.01:71,3,0	0/0:33,0:14:22.99:0,23,409	0/0:30,0:8:24.08:0,24,436	0/0:34,0:34:93.10:0,93,2075	0/0:36,0:36:99:0,102,2382	0/0:8,0:8:21.07:0,21,559	1/1:2,31:32:93.17:1933,93,0	1/1:32,0:32:9.03:167,9,0	0/0:42,0:42:99:0,126,3133	0/0:26,0:25:63.21:0,63,1346	1/1:25,0:25:26.68:482,27,0	0/0:31,0:31:78.27:0,78,1843	0/0:23,0:23:66.23:0,66,1549	0/0:22,0:22:60.03:0,60,1377	1/1:27,0:27:9.03:175,9,0	0/0:27,0:26:69.23:0,69,1622	0/0:18,0:18:42.14:0,42,1018	1/1:24,0:24:59.18:1176,59,0	1/1:31,0:31:21.07:382,21,0	0/0:10,0:10:0.89:0,1,2	1/1:24,0:24:9.03:177,9,0	1/1:36,0:35:14:272,14,0	1/1:11,0:11:11.83:219,12,0	0/0:36,0:36:90.31:0,90,2207	1/1:32,0:32:22.51:1153,23,0	1/1:36,0:35:27.09:521,27,0	1/1:6,0:6:9.03:176,9,0
chr10	101047992	.	ATAT	A	3629.04	PASS	AC=26;AF=0.481;AN=54;BaseQRankSum=11.036;DP=712;FS=0.410;HRun=0;HaplotypeScore=189.5314;InbreedingCoeff=0.8928;MQ=60.54;MQ0=18;MQRankSum=-7.705;QD=11.38;ReadPosRankSum=2.614;VQSLOD=3.4328;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,3:3:3.01:47,3,0	0/0:33,0:14:26.82:0,27,307	0/0:30,0:8:24.07:0,24,368	0/0:34,0:34:89.41:0,89,1300	0/0:36,0:36:99:0,101,1478	0/0:8,0:8:20.96:0,21,355	1/1:33,0:32:65.28:1250,65,0	1/1:32,0:32:8.79:57,9,0	0/0:42,0:42:99:0,126,1965	0/0:26,0:25:61.87:0,62,786	1/1:25,0:25:23.39:192,23,0	0/0:31,0:31:80.07:0,80,1159	0/0:23,0:23:65.37:0,65,972	0/0:22,0:22:53.84:0,54,873	1/1:27,0:27:8.86:84,9,0	0/0:27,0:26:68.75:0,69,1045	0/0:18,0:18:44.65:0,45,682	1/1:24,0:24:37.66:722,38,0	1/1:31,0:31:8.06:110,8,0	0/0:3,7:10:0.47:0,0,1	1/1:24,0:24:8.93:64,9,0	1/1:36,0:35:14.63:117,15,0	1/1:7,3:10:8.58:117,9,0	0/0:36,0:36:89.69:0,90,1407	1/1:32,0:32:40.80:579,41,0	1/1:36,0:35:26.54:211,27,0	1/1:6,0:6:8.96:79,9,0
chr10	101048168	.	ATG	A	12299.70	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=18.629;DP=896;FS=3.282;HRun=0;HaplotypeScore=190.0960;InbreedingCoeff=0.9988;MQ=57.41;MQ0=7;MQRankSum=-2.109;QD=24.50;ReadPosRankSum=1.459;VQSLOD=5.0499;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,28:42:36.97:987,37,0	1/1:4,7:12:20.90:237,21,0	0/0:37,1:21:30.05:0,30,423	0/0:37,0:25:48.07:0,48,695	0/0:32,0:32:72.23:0,72,1156	0/0:33,0:33:90.31:0,90,1461	0/0:19,0:19:39.12:0,39,602	1/1:20,41:61:86.04:1393,86,0	1/1:7,27:34:63.20:781,63,0	0/0:33,1:35:56.10:0,56,1384	0/0:27,0:27:57.18:0,57,903	1/1:13,18:31:66.20:817,66,0	0/0:31,1:32:38.06:0,38,1112	0/0:34,0:34:87.30:0,87,1423	0/0:27,0:27:69.24:0,69,1120	1/1:9,25:34:63.20:781,63,0	0/0:25,0:25:54.18:0,54,879	0/0:28,0:28:66.18:0,66,1050	1/1:9,12:22:48.03:553,48,0	1/1:6,23:29:57.18:706,57,0	1/1:9,54:63:99:1562,126,0	1/1:8,20:28:66.21:817,66,0	1/1:9,20:29:62.47:779,62,0	1/1:14,18:32:46.74:630,47,0	0/0:26,0:26:69.24:0,69,1121	1/1:5,29:34:84.54:995,85,0	1/1:8,32:40:81.25:1002,81,0	1/1:4,7:11:21.07:260,21,0
chr10	101048228	.	CGT	C	2512.17	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.627;DP=846;FS=2.885;HRun=0;HaplotypeScore=151.4408;InbreedingCoeff=0.9981;MQ=68.77;MQ0=1;MQRankSum=-1.652;QD=24.87;ReadPosRankSum=2.522;VQSLOD=4.7099;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:93.32:0,93,1597	0/0:11,0:11:24.08:0,24,420	0/0:24,0:17:23.85:0,24,281	0/0:25,0:24:27.30:0,27,490	0/0:21,0:21:54.18:0,54,932	0/0:31,0:31:84.29:0,84,1449	0/0:22,0:22:63.22:0,63,1075	0/0:41,0:41:99:0,114,1924	0/0:53,0:53:99:0,132,2271	0/0:35,0:35:90.31:0,90,1578	0/0:19,0:19:48.15:0,48,808	1/1:2,27:28:66.22:892,66,0	0/0:37,0:37:99:0,102,1694	0/0:45,0:45:99:0,129,2178	0/0:38,0:38:96.31:0,96,1631	0/0:35,0:35:84.29:0,84,1455	0/0:27,0:27:72.25:0,72,1234	0/0:16,0:16:39.13:0,39,673	0/0:18,0:18:45.15:0,45,782	0/0:38,0:38:87.30:0,87,1520	0/0:54,0:54:99:0,117,2031	1/1:5,13:18:33.11:444,33,0	1/1:2,19:21:33.11:446,33,0	1/1:5,28:33:66.04:890,66,0	0/0:32,0:32:81.28:0,81,1410	0/0:35,0:35:87.23:0,87,1490	0/0:34,0:31:81.14:0,81,1292	0/0:10,0:10:27.09:0,27,451
chr10	101048344	.	CT	C	9489.73	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=15.445;DP=688;FS=6.018;HRun=8;HaplotypeScore=69.2920;InbreedingCoeff=0.9737;MQ=74.45;MQ0=0;MQRankSum=-1.337;QD=24.52;ReadPosRankSum=1.119;VQSLOD=5.7480;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:35:99:956,99,0	1/1:0,13:13:36.06:347,36,0	0/0:15,1:16:3.12:0,3,356	0/0:12,0:12:15.30:0,15,213	0/0:30,0:30:84.22:0,84,998	0/0:16,0:16:45.14:0,45,544	0/0:21,0:21:63.19:0,63,761	1/1:3,35:38:99:1002,105,0	1/1:2,23:26:66.11:637,66,0	0/0:34,0:34:96.27:0,96,1139	0/0:29,0:29:78.24:0,78,937	1/1:5,23:28:60.09:579,60,0	0/0:31,0:31:78.24:0,78,942	0/0:23,0:23:63.18:0,63,751	0/0:18,0:18:45.04:0,45,510	1/1:2,16:18:41.94:405,42,0	0/0:21,0:21:60.18:0,60,724	0/0:20,0:20:54.14:0,54,638	1/1:0,13:13:39.06:377,39,0	1/1:1,30:31:90.03:847,90,0	1/1:0,15:15:42.07:406,42,0	1/1:2,27:29:69.10:665,69,0	1/1:3,24:27:60.05:569,60,0	1/1:1,10:11:30.05:290,30,0	0/0:30,0:30:84.25:0,84,1005	1/1:4,35:39:68.85:933,69,0	1/1:6,47:53:99:1274,132,0	1/1:4,7:11:21.03:203,21,0
chr10	101048444	.	AATCTTCACATT	A	2066.66	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.424;DP=661;FS=2.920;HRun=0;HaplotypeScore=206.7747;InbreedingCoeff=0.9964;MQ=72.50;MQ0=0;MQRankSum=-6.824;QD=86.11;ReadPosRankSum=0.304;VQSLOD=3.3547;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.33:0,96,5416	0/0:9,0:9:27.09:0,27,1464	0/0:17,0:17:31.82:0,32,1860	0/0:9,0:9:27.08:0,27,961	0/0:37,0:37:99:0,111,5667	0/0:19,0:19:57.20:0,57,3094	0/0:24,0:24:72.23:0,72,3156	0/0:29,0:28:84.29:0,84,4434	0/0:19,0:19:57.20:0,57,3175	0/0:36,0:36:99:0,108,6144	0/0:29,0:29:87.28:0,87,4676	0/0:24,0:24:72.25:0,72,4020	0/0:21,0:21:63.22:0,63,3347	0/0:15,0:15:45.15:0,45,2583	1/1:0,24:24:60.21:2162,60,0	0/0:19,0:19:57.20:0,57,3190	0/0:31,0:31:93.32:0,93,5015	0/0:24,0:24:69.21:0,69,3792	0/0:28,0:28:84.28:0,84,4008	0/0:39,0:39:99:0,117,6655	0/0:11,0:11:33.11:0,33,1683	0/0:20,0:20:60.19:0,60,3079	0/0:28,0:28:84.29:0,84,4367	0/0:19,0:19:57.20:0,57,3124	0/0:25,0:25:75.26:0,75,4266	0/0:24,0:24:72.25:0,72,3928	0/0:40,0:40:99:0,120,6432	0/0:9,0:9:27.09:0,27,1583
chr10	101049134	.	TGA	T	564.20	PASS	AB=1.000;AC=26;AF=0.520;AN=50;BaseQRankSum=-0.884;DP=407;FS=8.487;HRun=0;HaplotypeScore=74.2499;InbreedingCoeff=0.1120;MQ=43.10;MQ0=29;MQRankSum=1.239;QD=2.03;ReadPosRankSum=0.807;VQSLOD=0.7093;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:14:5.99:0,6,49	0/0:6,0:6:0.46:0,0,1	./.	./.	0/0:20,0:19:2.01:0,2,44	0/1:15,0:14:9.27:38,0,9	0/1:18,0:16:27.05:27,0,61	0/0:12,0:12:0:0,0,0	0/0:10,0:8:2.99:0,3,24	1/1:12,0:11:2.90:18,3,0	1/1:15,0:15:2.97:20,3,0	0/1:21,0:19:15.09:37,0,15	0/1:17,0:14:0.08:0,0,36	0/1:18,0:16:13.40:44,0,13	0/0:18,0:17:8.99:0,9,74	1/1:16,0:16:11.51:96,12,0	0/1:15,0:15:7.09:7,0,84	0/1:18,0:14:7.28:14,0,7	1/1:10,0:10:8.87:67,9,0	1/1:12,0:12:2.29:22,2,0	1/1:22,0:19:11.93:90,12,0	0/1:22,0:21:15.98:36,0,16	0/0:15,0:13:5.84:0,6,35	./.	0/0:14,0:13:3.37:0,3,17	1/1:20,0:19:17.49:118,17,0	1/1:11,6:15:3.01:33,3,0	1/1:10,0:10:5.94:41,6,0
chr10	101049952	.	A	ATGTG	716.38	PASS	AB=0.984;AC=16;AF=0.320;AN=50;BaseQRankSum=0.698;DP=636;FS=4.680;HRun=0;HaplotypeScore=115.0648;InbreedingCoeff=0.2347;MQ=61.28;MQ0=12;MQRankSum=0.251;QD=2.45;ReadPosRankSum=-3.004;VQSLOD=1.5140;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:0.31:0,0,0	0/0:3,0:4:3:0,3,28	./.	./.	0/0:16,0:16:9.01:0,9,87	0/0:10,0:12:9.02:0,9,120	0/0:23,0:25:21.47:0,21,304	1/1:24,0:24:7.74:82,8,0	0/0:18,0:18:14.71:0,15,206	0/1:24,0:23:33.21:33,0,124	0/0:13,0:14:9.02:0,9,115	1/1:7,6:16:3.48:71,3,0	0/0:22,0:22:12.03:0,12,185	0/0:18,0:19:11.61:0,12,167	0/0:26,0:26:0.12:0,0,1	0/0:22,0:24:15.03:0,15,206	0/0:24,0:28:26.98:0,27,355	0/1:20,0:20:57.54:58,0,162	./.	0/1:21,0:21:32.75:33,0,73	1/1:49,0:59:4.80:22,5,0	0/1:22,0:22:28.34:150,0,28	1/1:24,0:23:15.05:225,15,0	1/1:17,9:35:11.51:165,12,0	0/1:22,0:24:11.92:12,0,109	0/0:17,0:18:3:0,3,28	0/1:17,0:19:19.38:19,0,35	0/0:4,0:4:3.01:0,3,46
chr10	101049987	.	T	TGA	115.66	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=7.101;DP=651;FS=1.864;HRun=0;HaplotypeScore=84.7327;InbreedingCoeff=0.4321;MQ=59.23;MQ0=18;MQRankSum=0.356;QD=1.63;ReadPosRankSum=2.034;VQSLOD=1.3788;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:78.46:0,78,717	0/0:8,0:8:20.97:0,21,173	0/0:33,0:14:35.93:0,36,375	0/0:41,0:22:45.78:0,46,552	0/0:23,0:22:41.93:0,42,376	0/0:14,0:14:26.94:0,27,261	0/0:27,0:27:68.99:0,69,695	0/0:19,0:19:46.49:0,46,358	0/0:23,0:23:59.99:0,60,598	0/0:20,0:20:43.56:0,44,486	0/0:12,0:12:32.98:0,33,314	0/0:23,0:22:26.34:0,26,224	0/0:22,0:22:59.94:0,60,574	0/0:24,0:24:53.81:0,54,547	1/1:3,18:22:11.54:199,12,0	0/0:22,0:22:56.95:0,57,537	0/0:22,0:22:53.53:0,54,535	0/0:26,0:26:74:0,74,658	0/0:12,0:12:32.91:0,33,278	0/0:25,0:25:40.09:0,40,470	0/0:45,0:44:27.51:0,28,474	0/0:20,0:20:9.08:0,9,274	0/0:19,0:18:4.89:0,5,228	0/1:36,0:36:8.99:9,0,184	0/0:27,0:27:51.33:0,51,451	0/0:23,0:22:65.91:0,66,567	0/1:13,0:13:5.09:5,0,213	0/0:10,0:10:29.95:0,30,262
chr10	101050355	.	GGGA	G	904.12	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.588;DP=653;FS=1.787;HRun=0;HaplotypeScore=92.0054;InbreedingCoeff=0.9985;MQ=75.51;MQ0=1;MQRankSum=-2.599;QD=31.18;ReadPosRankSum=3.125;VQSLOD=4.1114;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,2365	0/0:10,0:10:30.09:0,30,607	0/0:22,0:21:51.16:0,51,975	0/0:30,0:27:63.14:0,63,1098	0/0:22,0:22:57.16:0,57,1108	0/0:26,0:26:78.27:0,78,1695	0/0:24,0:24:69.23:0,69,1425	0/0:22,0:22:60.18:0,60,1151	0/0:22,0:22:60.21:0,60,1312	0/0:36,0:36:96.32:0,96,2012	0/0:15,0:15:45.15:0,45,970	0/0:28,0:28:81.28:0,81,1752	0/0:23,0:23:66.23:0,66,1427	0/0:24,0:24:66.23:0,66,1443	1/1:2,27:29:63.21:999,63,0	0/0:23,0:23:69.24:0,69,1508	0/0:34,0:34:96.33:0,96,2086	0/0:17,0:17:45.15:0,45,984	0/0:21,0:21:48.15:0,48,954	0/0:25,0:25:75.26:0,75,1625	0/0:27,0:27:69.19:0,69,1423	0/0:12,0:12:30.09:0,30,610	0/0:16,0:16:36.11:0,36,740	0/0:19,0:19:48.12:0,48,1003	0/0:17,0:17:48.15:0,48,987	0/0:19,0:19:51.17:0,51,1078	0/0:40,0:40:99:0,117,2446	0/0:11,0:11:33.11:0,33,711
chr10	101050895	.	AAACAAAAC	A	4238.58	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.207;DP=716;FS=10.926;HRun=0;HaplotypeScore=179.7025;InbreedingCoeff=0.9987;MQ=62.59;MQ0=3;MQRankSum=-9.505;QD=40.37;ReadPosRankSum=-0.492;VQSLOD=3.8889;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,4055	0/0:15,0:15:39.13:0,39,1453	0/0:32,0:27:49.70:0,50,1837	0/0:44,0:36:86.59:0,87,1906	0/0:32,0:32:84.26:0,84,3097	0/0:19,0:19:54.18:0,54,2053	0/0:26,0:26:69.24:0,69,2107	0/0:22,0:22:63.22:0,63,1975	0/0:22,0:22:60.21:0,60,2321	0/0:31,0:31:87.30:0,87,3292	0/0:22,0:22:54.18:0,54,2038	1/1:1,23:24:48.16:1322,48,0	0/0:23,0:23:66.22:0,66,2392	0/0:29,0:29:78.22:0,78,2680	0/0:34,0:34:99:0,102,4269	0/0:24,0:24:66.22:0,66,2186	0/0:28,0:28:78.27:0,78,2794	0/0:16,0:17:48.11:0,48,1445	0/0:22,0:21:57.18:0,57,1775	0/0:30,0:30:81.28:0,81,2901	0/0:22,0:22:63.20:0,63,2280	1/1:0,25:25:57.06:1136,57,0	1/1:3,23:26:53.01:1337,53,0	1/1:3,27:30:21.03:444,21,0	0/0:20,0:20:57.17:0,57,2188	0/0:26,0:26:72.25:0,72,2612	0/0:17,0:17:48.15:0,48,1733	0/0:10,0:10:30.10:0,30,1100
chr10	101051362	.	G	GGA	325.43	PASS	AB=0.972;AC=17;AF=0.354;AN=48;BaseQRankSum=-0.882;DP=525;FS=10.528;HRun=0;HaplotypeScore=115.8532;InbreedingCoeff=0.0958;MQ=66.30;MQ0=26;MQRankSum=2.478;QD=1.26;ReadPosRankSum=2.760;VQSLOD=1.6420;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:32:10.90:13,0,11	0/1:10,0:10:15.73:16,0,34	0/1:48,0:21:0:0,0,0	./.	0/1:15,0:14:0.01:0,0,0	0/0:17,0:18:8.76:0,9,64	0/0:23,0:22:1.02:0,1,43	./.	0/1:14,0:13:8.75:62,0,9	1/1:19,0:18:8.47:51,8,0	1/1:18,0:17:5.84:39,6,0	0/1:19,4:22:26.05:38,0,26	0/0:17,0:17:22.77:0,23,197	0/0:10,0:10:9.02:0,9,96	0/0:14,0:15:3.21:0,3,33	0/0:19,0:19:12.38:0,12,94	0/1:22,0:20:2.76:3,0,147	0/0:7,0:7:2.82:0,3,69	0/0:11,0:9:5.70:0,6,43	0/0:18,0:16:2.84:0,3,14	./.	1/1:9,3:11:9.02:113,9,0	./.	0/1:16,2:15:52.05:76,0,52	0/1:17,0:17:23.56:45,0,24	0/0:14,0:14:7.78:0,8,48	0/0:18,0:16:4.95:0,5,65	1/1:5,0:4:1.36:4,1,0
chr10	101051409	.	GAC	G	1090.99	PASS	AB=0.988;AC=26;AF=0.542;AN=48;BaseQRankSum=8.152;DP=515;FS=8.167;HRun=0;HaplotypeScore=103.1984;InbreedingCoeff=0.4249;MQ=36.39;MQ0=80;MQRankSum=-3.291;QD=3.42;ReadPosRankSum=0.021;VQSLOD=1.6680;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:31:5.57:31,6,0	1/1:4,2:6:0.51:24,1,0	./.	./.	0/0:20,0:19:5.98:0,6,48	0/1:24,1:23:45.09:45,0,170	0/0:23,0:18:8.20:0,8,96	1/1:22,0:15:34.57:144,35,0	1/1:12,3:13:15.76:159,16,0	0/1:26,1:23:57.87:58,0,321	0/1:23,0:18:13.58:14,0,59	0/0:22,0:19:17.24:0,17,147	0/0:26,1:24:21.58:0,22,468	0/0:19,0:14:10.42:0,10,210	0/1:19,0:16:2.23:2,0,39	1/1:20,3:20:29.67:219,30,0	0/1:29,0:22:2.25:2,0,315	0/0:11,0:6:13.87:0,14,127	1/1:8,0:7:16.03:82,16,0	1/1:9,3:10:5.44:29,5,0	./.	0/1:20,0:17:15.88:16,0,63	./.	0/0:20,0:12:12.01:0,12,189	0/0:24,0:22:22.36:0,22,198	1/1:16,2:18:37.97:208,38,0	1/1:20,3:16:28.34:190,28,0	1/1:6,1:5:5.90:42,6,0
chr10	101051413	.	GAGAC	G	1897.61	PASS	AB=1.000;AC=23;AF=0.460;AN=50;BaseQRankSum=6.391;DP=493;FS=0.649;HRun=0;HaplotypeScore=105.4465;InbreedingCoeff=0.6633;MQ=36.45;MQ0=79;MQRankSum=-3.180;QD=8.47;ReadPosRankSum=-0.435;VQSLOD=2.1655;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:31:2.60:10,3,0	0/0:5,0:5:5.64:0,6,27	./.	./.	0/0:18,0:17:9.03:0,9,163	0/0:25,0:23:28.85:0,29,512	0/0:23,0:18:1.83:0,2,102	1/1:6,16:15:44.73:553,45,0	1/1:11,3:12:3.09:132,3,0	0/0:27,0:23:33.89:0,34,818	0/0:22,0:17:8.99:0,9,187	0/0:21,0:18:17.31:0,17,143	0/0:26,0:23:45.37:0,45,753	0/0:18,0:13:9.16:0,9,273	1/1:13,5:15:3:49,3,0	1/1:21,2:20:12.95:259,13,0	0/1:28,0:21:0.59:1,0,459	0/0:10,0:5:11.85:0,12,190	1/1:3,3:5:11.95:151,12,0	1/1:10,2:10:0.84:53,1,0	./.	0/0:16,0:13:6.02:0,6,75	1/1:13,0:13:0.47:1,0,0	0/0:20,0:13:12.01:0,12,166	0/0:24,0:22:19.09:0,19,389	1/1:12,4:16:38.78:541,39,0	1/1:19,5:18:16.76:313,17,0	1/1:4,3:5:0.89:2,1,0
chr10	101051415	.	GAC	G	612.09	PASS	AB=0.964;AC=20;AF=0.385;AN=52;BaseQRankSum=6.531;DP=492;FS=1.312;HRun=0;HaplotypeScore=102.1065;InbreedingCoeff=0.2049;MQ=36.65;MQ0=80;MQRankSum=-0.993;QD=2.13;ReadPosRankSum=-1.214;VQSLOD=1.9680;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:31:2.60:10,3,0	0/0:4,1:5:5.64:0,6,26	./.	./.	0/0:18,0:17:9.01:0,9,139	0/1:25,0:23:6.32:6,0,428	0/0:24,0:19:7.96:0,8,163	1/1:24,0:15:38.89:166,39,0	0/1:13,1:12:2.44:56,0,2	0/0:27,0:23:15.25:0,15,867	0/0:20,0:15:8.99:0,9,173	0/1:20,1:18:17.36:17,0,86	0/0:26,0:23:26.63:0,27,653	0/0:17,0:12:8.39:0,8,259	1/1:13,4:14:2.99:25,3,0	0/1:22,0:19:22.41:80,0,22	0/1:29,0:22:7.96:8,0,459	0/0:10,0:5:11.88:0,12,200	0/1:6,0:5:9.79:27,0,10	0/1:11,2:11:6.75:13,0,7	1/1:15,0:2:3:25,3,0	0/0:16,0:13:6.02:0,6,107	0/1:12,1:13:0:0,0,0	0/0:19,0:12:11.94:0,12,197	0/0:23,0:21:22.46:0,22,368	1/1:14,3:17:6.96:262,7,0	0/1:23,1:18:10.53:68,0,11	0/1:6,0:4:0:0,0,0
chr10	101051419	.	GAGAGAGAC	G	365.77	PASS	AB=1.000;AC=13;AF=0.260;AN=50;BaseQRankSum=5.505;DP=495;FS=10.756;HRun=0;HaplotypeScore=125.7889;InbreedingCoeff=0.1300;MQ=36.75;MQ0=81;MQRankSum=-4.040;QD=2.09;ReadPosRankSum=0.177;VQSLOD=1.8993;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:5,0:5:1.76:0,2,6	./.	./.	0/0:16,0:15:9.03:0,9,291	0/0:25,0:23:26.91:0,27,754	0/0:25,0:20:16.61:0,17,322	1/1:27,0:17:34.50:268,35,0	0/1:14,0:12:6.24:6,0,41	0/0:25,0:21:32.15:0,32,1143	0/0:18,0:13:9.03:0,9,315	0/1:18,0:16:11.34:54,0,11	0/0:25,0:22:35.90:0,36,952	0/0:17,0:12:13.60:0,14,420	1/1:15,0:12:0.89:2,1,0	0/1:20,0:17:35.07:35,0,79	0/0:29,0:22:37.38:0,37,565	0/0:10,0:5:12:0,12,193	0/1:10,0:6:13.79:14,0,56	0/1:12,0:10:3.65:4,0,26	0/0:15,0:2:3.01:0,3,39	0/0:17,0:14:8.95:0,9,81	1/1:13,0:13:2.90:16,3,0	0/0:19,0:12:8.98:0,9,101	0/0:25,0:23:18.85:0,19,578	0/1:21,0:21:98.69:99,0,342	0/1:25,0:19:3.29:3,0,208	0/0:8,0:6:3.99:0,4,122
chr10	101055372	.	G	GA	814.31	PASS	AB=0.955;AC=5;AF=0.089;AN=56;BaseQRankSum=-3.712;DP=645;FS=4.957;HRun=10;HaplotypeScore=79.1334;InbreedingCoeff=0.7399;MQ=76.37;MQ0=0;MQRankSum=1.519;QD=11.31;ReadPosRankSum=-0.667;VQSLOD=3.1111;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:33:52.19:609,52,0	0/0:12,0:12:32.96:0,33,271	0/1:18,1:21:14.91:15,0,156	0/0:20,0:20:20.27:0,20,169	0/0:17,0:17:41.92:0,42,345	0/0:15,0:15:35.96:0,36,296	0/0:13,2:16:8.97:0,9,264	0/0:28,0:29:76.89:0,77,612	0/0:23,0:23:47.93:0,48,394	0/0:26,0:27:30.45:0,30,442	0/0:13,1:16:8.01:0,8,243	0/0:33,0:32:68.82:0,69,564	0/0:24,0:23:53.89:0,54,443	0/0:17,0:19:36.66:0,37,282	1/1:3,15:18:30.07:319,30,0	0/0:17,0:18:40.98:0,41,326	0/0:42,0:43:99:0,101,819	0/0:24,0:24:71.92:0,72,591	0/0:26,0:25:43.80:0,44,452	0/0:30,0:30:74.89:0,75,616	0/0:17,0:17:41.94:0,42,342	0/0:18,0:18:50.92:0,51,415	0/0:25,0:25:56.91:0,57,468	0/0:39,0:38:92.83:0,93,763	0/0:19,1:19:24.95:0,25,411	0/0:21,0:23:54.98:0,55,427	0/0:19,0:19:47.74:0,48,375	0/0:20,0:20:38.89:0,39,320
chr10	101055521	.	GGTGT	G	2261.12	PASS	AB=0.886;AC=17;AF=0.327;AN=52;BaseQRankSum=1.607;DP=564;FS=1.732;HRun=0;HaplotypeScore=130.1519;InbreedingCoeff=0.6190;MQ=59.27;MQ0=9;MQRankSum=-0.795;QD=12.85;ReadPosRankSum=0.683;VQSLOD=3.3285;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:33:6.02:0,6,105	1/1:10,0:11:17.80:283,18,0	0/0:19,0:13:5.97:0,6,77	0/0:13,0:7:3.01:0,3,49	0/0:10,0:10:9.03:0,9,172	0/0:13,0:13:32.60:0,33,696	0/0:33,1:39:63.08:0,63,1263	1/1:9,14:23:32.94:390,33,0	1/1:17,1:19:6.61:174,7,0	0/0:31,0:31:47.17:0,47,1208	0/0:17,0:16:30.10:0,30,640	0/0:31,0:28:8.51:0,9,212	0/0:14,0:14:27.06:0,27,501	0/0:15,0:15:32.89:0,33,559	0/0:15,0:15:12.83:0,13,122	1/1:11,0:11:15.04:192,15,0	0/0:38,0:38:80.60:0,81,1657	0/0:35,0:35:66.32:0,66,1277	1/1:22,0:22:16.42:237,16,0	1/1:9,0:10:8.64:136,9,0	0/1:46,0:46:17.14:321,0,17	./.	./.	0/0:26,0:24:5.70:0,6,94	0/0:21,0:24:38.85:0,39,793	0/1:9,2:15:26.27:486,0,26	1/1:10,0:11:11.23:125,11,0	0/1:4,0:4:6.87:100,0,7
chr10	101055549	.	TGCGCGCGCGCGC	T	159.81	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=2.562;DP=493;FS=3.879;HRun=0;HaplotypeScore=175.0540;InbreedingCoeff=0.5581;MQ=47.26;MQ0=10;MQRankSum=-2.780;QD=3.07;ReadPosRankSum=-1.887;VQSLOD=2.6333;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,1:31:3.01:36,3,0	0/0:10,0:10:18.25:0,18,313	0/0:3,0:1:2.99:0,3,24	0/0:3,0:1:2.98:0,3,21	0/0:9,0:9:15.05:0,15,673	0/0:15,0:15:42.14:0,42,2126	0/0:35,0:35:80.10:0,80,3209	0/0:18,0:18:24.67:0,25,322	0/0:9,0:9:12.04:0,12,414	0/0:26,0:26:75.25:0,75,3225	0/0:13,0:13:30.10:0,30,1206	1/1:7,8:17:9.02:222,9,0	0/0:13,0:12:23.64:0,24,1071	0/0:15,0:15:30.10:0,30,1050	0/0:4,0:7:11.34:0,11,78	0/0:9,0:9:12.04:0,12,252	0/0:37,0:37:92.82:0,93,4208	0/0:32,0:32:81.23:0,81,3665	0/0:25,0:22:50.53:0,51,1184	0/0:9,0:9:9:0,9,146	0/0:60,0:57:1.08:0,1,610	./.	./.	0/0:7,14:20:0.13:0,0,1	0/0:24,0:22:48.16:0,48,2058	0/0:22,0:22:19.09:0,19,1661	0/0:9,0:9:11.63:0,12,370	0/0:5,0:5:15.04:0,15,330
chr10	101055563	.	C	CGTGTGT	2477.95	PASS	AB=0.793;AC=22;AF=0.458;AN=48;BaseQRankSum=2.492;DP=471;FS=7.238;HRun=0;HaplotypeScore=144.7117;InbreedingCoeff=0.6932;MQ=45.96;MQ0=11;MQRankSum=-6.659;QD=11.80;ReadPosRankSum=-2.842;VQSLOD=1.8797;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:2.99:0,3,63	1/1:4,0:4:3.01:32,3,0	./.	./.	0/0:10,0:10:18.05:0,18,345	0/0:15,0:15:33.09:0,33,605	0/0:41,0:39:77.71:0,78,1447	1/1:14,0:14:15.04:247,15,0	1/1:11,0:12:6.01:64,6,0	0/0:24,0:23:44.99:0,45,751	0/0:9,0:9:12.04:0,12,244	1/1:17,0:14:9.03:149,9,0	0/0:13,0:12:13.71:0,14,243	0/0:17,0:17:20.27:0,20,318	0/0:6,0:6:1.55:0,2,4	1/1:7,0:7:3.01:50,3,0	0/0:39,0:39:72.37:0,72,1445	0/0:32,0:32:69.15:0,69,1235	1/1:14,4:16:24.08:539,24,0	0/1:6,2:8:0:0,0,0	1/1:56,7:55:26.89:363,27,0	./.	./.	1/1:25,0:21:2.94:33,3,0	0/0:21,0:20:36.07:0,36,633	0/1:16,6:21:25.68:779,0,26	1/1:5,7:14:9.02:181,9,0	1/1:6,0:6:12.04:214,12,0
chr10	101055577	.	TGCGCGCGC	T	82.13	PASS	AB=0.982;AC=6;AF=0.115;AN=52;BaseQRankSum=3.586;DP=470;FS=6.138;HRun=0;HaplotypeScore=139.2573;InbreedingCoeff=0.1373;MQ=48.87;MQ0=12;MQRankSum=-4.142;QD=0.56;ReadPosRankSum=-2.713;VQSLOD=1.6787;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:2.94:0,3,130	0/0:5,0:5:6.02:0,6,185	./.	0/0:4,0:1:3:0,3,27	0/0:10,0:10:21.07:0,21,901	0/0:13,0:13:39.12:0,39,1226	0/0:43,0:41:99:0,114,3904	0/0:11,0:11:30.07:0,30,1053	0/0:14,0:14:18.06:0,18,603	0/0:20,0:19:57.08:0,57,1750	0/0:7,0:7:12.04:0,12,496	1/1:17,1:15:6.02:137,6,0	0/0:16,0:15:34.62:0,35,941	0/0:17,0:17:30.56:0,31,901	0/0:6,0:6:8.94:0,9,106	0/0:7,0:7:3.01:0,3,106	0/0:38,0:38:41.97:0,42,3240	0/1:32,1:33:9.96:10,0,2839	0/1:22,0:19:13.09:13,0,823	0/0:10,0:10:5.48:0,5,218	0/1:60,3:60:3.08:3,0,1410	./.	0/0:1,1:2:0:0,0,0	0/0:21,1:19:1.87:0,2,7	0/0:15,0:14:36.08:0,36,1272	0/0:20,0:19:29.58:0,30,1039	0/0:11,0:11:4.20:0,4,209	0/1:6,0:6:27.61:28,0,360
chr10	101055603	.	CGT	C	250.86	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.287;DP=417;FS=0.000;HRun=0;HaplotypeScore=91.6524;InbreedingCoeff=0.7779;MQ=57.11;MQ0=5;MQRankSum=-0.488;QD=5.02;ReadPosRankSum=-4.050;VQSLOD=1.5213;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:23:8.36:73,8,0	0/0:9,0:9:18.02:0,18,229	0/0:8,0:5:12.02:0,12,135	0/0:6,0:3:3.26:0,3,62	0/0:9,0:9:24.06:0,24,410	0/0:10,0:10:18.04:0,18,419	0/0:34,0:33:97.17:0,97,1750	0/0:17,0:17:48.02:0,48,728	0/0:14,0:14:27.08:0,27,464	0/0:13,0:13:39.12:0,39,675	0/0:6,0:6:9.02:0,9,141	1/1:5,2:7:11.24:103,11,0	0/0:10,0:10:27.92:0,28,453	0/0:13,0:13:33.57:0,34,579	0/0:11,0:11:23.70:0,24,358	0/0:5,0:5:6.02:0,6,107	0/0:35,0:35:92.08:0,92,1587	0/0:33,0:33:72.78:0,73,1529	0/0:19,0:15:35.13:0,35,530	0/0:10,0:10:8.41:0,8,140	0/0:55,0:54:75.04:0,75,1335	1/1:5,0:5:6.01:70,6,0	0/0:2,1:3:0:0,0,0	1/1:13,1:13:14.14:146,14,0	0/0:12,0:12:27.08:0,27,457	0/0:18,0:17:45.11:0,45,746	0/0:12,0:12:12.04:0,12,214	0/0:5,0:5:11.97:0,12,159
chr10	101055650	.	GTGTC	G	4646.73	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=4.444;DP=648;FS=9.919;HRun=0;HaplotypeScore=141.2279;InbreedingCoeff=0.9794;MQ=64.76;MQ0=9;MQRankSum=-0.768;QD=24.72;ReadPosRankSum=1.428;VQSLOD=4.3567;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:90.29:0,90,1684	1/1:2,12:14:17.72:286,18,0	0/0:46,0:19:13.86:0,14,244	0/0:45,0:29:41.20:0,41,603	0/0:10,0:10:27.08:0,27,559	0/0:13,0:13:36.12:0,36,852	0/0:36,0:36:84.26:0,84,1805	1/1:5,11:16:33.10:511,33,0	1/1:4,12:17:27.09:447,27,0	0/0:24,0:24:57.09:0,57,1199	0/0:14,0:14:30.10:0,30,629	0/0:20,0:20:45.15:0,45,805	0/0:13,0:13:30.09:0,30,667	0/0:16,0:16:27.09:0,27,595	0/0:23,0:23:66.06:0,66,1400	1/1:2,8:10:12.04:200,12,0	0/0:47,0:47:99:0,105,2459	0/0:35,0:35:87.80:0,88,1850	1/1:2,11:13:33.11:528,33,0	1/1:3,13:16:18.04:301,18,0	1/1:22,38:59:56.77:952,57,0	0/0:17,0:17:39.13:0,39,624	0/0:13,0:13:29.97:0,30,549	0/0:33,0:33:57.02:0,57,1116	0/0:13,0:13:33.10:0,33,768	1/1:3,22:25:66.20:1026,66,0	1/1:2,8:10:11.64:200,12,0	1/1:3,4:7:12.04:194,12,0
chr10	101056532	.	C	CT	10094.78	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-16.387;DP=568;FS=6.264;HRun=6;HaplotypeScore=52.4617;InbreedingCoeff=0.9964;MQ=83.48;MQ0=0;MQRankSum=-1.785;QD=31.16;ReadPosRankSum=0.376;VQSLOD=5.3118;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:57.18:717,57,0	1/1:0,8:8:24.08:302,24,0	0/0:20,0:20:41.49:0,41,413	0/0:16,0:16:33.82:0,34,351	0/0:31,0:31:81.17:0,81,819	0/0:23,0:23:60.13:0,60,612	0/0:20,0:20:57.13:0,57,581	1/1:6,38:44:99:1392,114,0	1/1:0,20:20:45.14:566,45,0	0/0:27,0:27:75.15:0,75,754	0/0:22,0:22:63.14:0,63,641	1/1:2,21:23:63.20:793,63,0	0/0:22,0:22:63.14:0,63,642	0/0:13,0:13:36.08:0,36,367	1/1:0,19:19:54.17:679,54,0	1/1:1,22:22:56.97:717,57,0	0/0:26,0:26:72.16:0,72,735	0/0:6,0:6:15:0,15,143	1/1:2,18:20:26.59:649,27,0	1/1:1,22:23:63.11:756,63,0	1/1:1,10:11:24.08:302,24,0	1/1:0,14:14:36.12:453,36,0	1/1:2,18:21:57.05:694,57,0	1/1:1,9:10:24.08:302,24,0	0/0:18,0:18:42.09:0,42,428	1/1:2,19:21:57.18:717,57,0	1/1:11,22:32:60.19:755,60,0	1/1:2,10:12:24.08:302,24,0
chr10	101058225	.	T	TTG	7135.08	PASS	AB=0.611;AC=23;AF=0.426;AN=54;BaseQRankSum=1.579;DP=700;FS=7.453;HRun=0;HaplotypeScore=123.9587;InbreedingCoeff=0.8564;MQ=54.37;MQ0=8;MQRankSum=2.649;QD=20.27;ReadPosRankSum=-0.036;VQSLOD=5.1015;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:6:57,6,0	1/1:3,5:8:15.05:232,15,0	0/0:25,0:13:2.99:0,3,25	./.	0/0:15,0:15:21.06:0,21,241	0/0:21,0:21:27.08:0,27,310	0/0:36,0:36:69.12:0,69,736	1/1:20,17:37:50.95:694,51,0	1/1:12,28:40:63.21:966,63,0	0/0:34,0:34:42.22:0,42,683	0/0:16,0:18:29.89:0,30,305	0/0:25,0:25:28.41:0,28,140	0/0:23,0:25:47.94:0,48,510	0/0:27,0:26:42.12:0,42,483	1/1:19,1:26:12:107,12,0	1/1:9,30:39:38.45:998,38,0	0/0:27,0:29:47.87:0,48,490	0/0:10,0:10:23.94:0,24,256	1/1:11,13:24:39.04:521,39,0	1/1:5,16:21:45.15:671,45,0	1/1:11,28:40:5.89:774,6,0	0/0:14,0:14:19.89:0,20,98	0/0:16,0:15:31.21:0,31,152	0/0:19,0:19:14.20:0,14,70	0/0:16,0:18:21.06:0,21,241	0/1:12,21:33:19.61:557,0,20	1/1:16,26:41:24.14:1093,24,0	1/1:5,13:18:30.10:464,30,0
chr10	101058245	.	GTGTGTGTA	G	1069.75	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=8.299;DP=678;FS=48.526;HRun=0;HaplotypeScore=203.0629;InbreedingCoeff=0.7592;MQ=54.90;MQ0=13;MQRankSum=-6.901;QD=8.77;ReadPosRankSum=0.612;VQSLOD=1.0046;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:69.83:70,0,86	0/0:5,0:5:15.05:0,15,575	0/0:23,0:9:5.39:0,5,423	0/0:22,0:14:23.21:0,23,502	0/0:12,0:11:30.03:0,30,1165	0/0:22,0:22:51.11:0,51,1595	0/0:34,0:34:99:0,99,3356	0/0:28,0:28:81.20:0,81,2504	0/0:35,0:34:74.99:0,75,2568	0/0:32,0:32:96.28:0,96,3604	0/0:19,0:19:51.12:0,51,1588	1/1:26,1:27:29.93:316,30,0	0/0:28,0:28:72.19:0,72,2461	0/0:27,0:26:60.14:0,60,2265	0/1:25,0:25:2.91:3,0,338	0/0:46,0:46:99:0,102,3257	0/0:28,0:28:72.23:0,72,2561	0/0:12,0:12:36.06:0,36,1188	0/0:18,0:17:48.16:0,48,1722	0/0:20,0:20:54.15:0,54,1886	0/0:45,0:45:96.28:0,96,3044	1/1:15,1:16:23.90:255,24,0	1/1:12,2:13:33:401,33,0	1/1:16,1:17:15:188,15,0	0/0:14,0:14:27.04:0,27,1027	0/0:30,0:30:78.17:0,78,2546	0/0:41,0:40:99:0,109,3563	0/0:15,0:15:33.11:0,33,1192
chr10	101058247	.	GTGTGTA	G	2295.19	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=4.174;DP=673;FS=50.532;HRun=0;HaplotypeScore=177.1619;InbreedingCoeff=0.7296;MQ=54.79;MQ0=13;MQRankSum=-6.530;QD=18.81;ReadPosRankSum=0.520;VQSLOD=1.5372;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:61.27:70,0,61	0/0:6,0:6:15.05:0,15,445	0/0:21,0:9:2.39:0,2,283	0/0:21,0:13:23.16:0,23,380	0/0:12,0:11:30:0,30,910	0/0:21,0:21:51.08:0,51,1247	0/0:36,0:36:99:0,102,2729	0/0:27,0:27:78.19:0,78,1911	0/0:35,0:34:74.68:0,75,1955	0/0:32,0:32:95.10:0,95,2890	0/0:20,0:20:53.83:0,54,1257	1/1:1,26:27:33.11:744,33,0	0/0:26,0:26:69.16:0,69,1934	0/0:26,0:25:57.13:0,57,1765	0/1:26,0:26:6.45:6,0,235	0/0:44,0:44:96.26:0,96,2482	0/0:29,0:29:75.20:0,75,1948	0/0:12,0:12:36.06:0,36,932	0/0:18,0:17:48.16:0,48,1337	0/0:21,0:21:54.15:0,54,1456	0/0:46,0:46:96.24:0,96,2286	1/1:1,15:16:26.98:541,27,0	1/1:3,11:13:33.11:757,33,0	1/1:3,14:17:15.05:342,15,0	0/0:13,0:13:27.04:0,27,827	0/0:31,0:31:78.12:0,78,1911	0/0:40,0:39:99:0,102,2687	0/0:14,0:14:30.10:0,30,888
chr10	101058449	.	CT	C	1204.07	PASS	AB=0.810;AC=25;AF=0.543;AN=46;BaseQRankSum=6.790;DP=392;FS=9.253;HRun=2;HaplotypeScore=47.9976;InbreedingCoeff=0.6573;MQ=21.76;MQ0=204;MQRankSum=-0.445;QD=6.02;ReadPosRankSum=0.258;VQSLOD=-0.1249;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:20,8:9:5.98:54,6,0	./.	./.	./.	0/0:8,0:4:2.98:0,3,42	0/0:14,0:10:24.05:0,24,318	0/0:17,1:8:4.41:0,4,189	1/1:18,3:3:9.03:112,9,0	1/1:15,4:10:23.77:203,24,0	0/0:20,0:10:28.18:0,28,299	0/0:10,0:9:2.91:0,3,31	1/1:8,7:7:3.01:37,3,0	0/0:10,0:2:6.02:0,6,81	0/0:14,0:8:21.04:0,21,252	1/1:7,3:4:3.01:36,3,0	1/1:12,0:8:8.93:76,9,0	0/0:22,0:7:17.99:0,18,208	0/0:13,0:5:15.03:0,15,182	1/1:11,0:4:4.65:46,5,0	1/1:6,5:9:26.81:246,27,0	./.	1/1:9,8:8:15.05:185,15,0	1/1:1,4:4:4.40:18,4,0	./.	0/0:19,0:15:30.89:0,31,404	0/1:13,4:9:46.92:158,0,47	1/1:18,0:11:17.84:129,18,0	1/1:16,0:5:11.80:76,12,0
chr10	101058451	.	TC	T	1561.57	PASS	AB=0.905;AC=26;AF=0.565;AN=46;BaseQRankSum=6.404;DP=378;FS=9.239;HRun=2;HaplotypeScore=44.9791;InbreedingCoeff=0.6289;MQ=21.97;MQ0=193;MQRankSum=-2.412;QD=7.62;ReadPosRankSum=-1.072;VQSLOD=-0.2783;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:26,1:9:6.49:71,6,0	./.	./.	./.	0/0:7,0:4:1.40:0,1,41	0/0:12,0:9:23.22:0,23,321	0/0:17,0:8:7.12:0,7,173	1/1:22,0:3:9.03:102,9,0	1/1:16,5:11:23.91:272,24,0	0/0:18,0:10:26.80:0,27,267	0/1:9,0:9:2.57:3,0,16	1/1:15,0:7:2.96:19,3,0	0/0:10,0:2:6.02:0,6,83	0/0:13,0:7:20.96:0,21,234	1/1:9,0:3:3.01:35,3,0	1/1:4,8:8:9.03:109,9,0	0/0:20,0:8:16.25:0,16,208	0/0:13,0:5:14.26:0,14,164	1/1:7,3:3:6.02:77,6,0	1/1:8,4:9:26.88:284,27,0	./.	1/1:13,0:8:15.05:184,15,0	1/1:5,0:4:1.82:5,2,0	./.	0/0:19,0:15:27.94:0,28,403	0/1:13,4:9:25.22:235,0,25	1/1:8,10:11:18.05:220,18,0	1/1:11,4:4:9.03:116,9,0
chr10	101058521	.	CCTT	C	205.43	PASS	AB=0.944;AC=12;AF=0.333;AN=36;BaseQRankSum=5.568;DP=163;FS=36.094;HRun=0;HaplotypeScore=37.2144;InbreedingCoeff=0.5513;MQ=32.56;MQ0=12;MQRankSum=-4.413;QD=6.85;ReadPosRankSum=1.149;VQSLOD=1.1006;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/1:2,0:2:10.87:15,0,11	0/0:18,0:2:5.04:0,5,39	0/0:35,0:5:15.04:0,15,282	0/0:4,0:4:12.01:0,12,228	0/0:7,0:7:21.07:0,21,462	0/0:14,0:13:30.10:0,30,615	1/1:6,0:3:2.74:12,3,0	1/1:6,1:7:7.95:72,8,0	0/0:12,0:12:30.08:0,30,576	0/0:10,0:9:24.08:0,24,532	./.	./.	./.	./.	1/1:1,1:2:5.93:68,6,0	0/0:8,0:6:15.05:0,15,327	0/0:6,0:5:15.05:0,15,309	0/0:2,0:1:3:0,3,25	1/1:2,0:2:3.01:32,3,0	./.	./.	./.	./.	0/0:5,0:5:15.05:0,15,335	0/1:7,1:6:3.40:72,0,3	1/1:2,1:3:5.85:64,6,0	./.
chr10	101058530	.	TCCTCTCCTC	T	522.63	PASS	AB=0.750;AC=13;AF=0.361;AN=36;BaseQRankSum=5.341;DP=162;FS=40.890;HRun=0;HaplotypeScore=43.8783;InbreedingCoeff=0.6547;MQ=30.83;MQ0=14;MQRankSum=-3.935;QD=22.72;ReadPosRankSum=3.082;VQSLOD=1.1895;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/1:2,1:3:12.17:73,0,12	0/0:24,0:5:14.06:0,14,203	0/0:40,0:5:12.04:0,12,310	0/0:4,0:4:12.04:0,12,329	0/0:8,0:8:18.02:0,18,502	0/0:15,0:13:30.10:0,30,1064	1/1:6,0:3:3.01:69,3,0	1/1:3,1:3:9.03:150,9,0	0/0:13,0:13:27.56:0,28,1080	0/0:9,0:8:24.08:0,24,931	./.	./.	0/0:3,0:3:5.69:0,6,89	./.	1/1:1,1:2:6.02:110,6,0	0/0:7,0:5:12.04:0,12,482	0/0:5,0:4:12.04:0,12,488	./.	1/1:0,1:1:3.01:61,3,0	./.	./.	./.	./.	0/0:5,0:5:12.04:0,12,466	1/1:4,1:3:8.98:129,9,0	1/1:2,0:2:6.02:69,6,0	./.
chr10	101059036	.	T	TCC	2675.63	PASS	AB=0.775;AC=44;AF=0.917;AN=48;BaseQRankSum=-2.880;DP=162;FS=17.400;HRun=2;HaplotypeScore=43.5331;InbreedingCoeff=0.0190;MQ=43.27;MQ0=0;MQRankSum=-2.650;QD=19.11;ReadPosRankSum=-1.590;VQSLOD=-0.5237;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:2,9:11:1.26:181,0,1	1/1:0,1:1:3.01:55,3,0	0/1:2,0:2:20.88:21,0,22	0/0:2,0:1:3.01:0,3,33	1/1:1,2:3:2.96:19,3,0	1/1:1,4:5:2.97:20,3,0	1/1:1,5:6:3.01:53,3,0	1/1:5,0:5:9.03:107,9,0	1/1:1,5:6:2.97:20,3,0	1/1:0,2:2:6.02:96,6,0	./.	1/1:1,3:4:2.97:20,3,0	1/1:0,3:5:3.01:43,3,0	1/1:0,2:2:6.02:106,6,0	1/1:2,5:7:3.01:35,3,0	1/1:0,9:9:11.93:217,12,0	./.	1/1:2,5:7:2.25:109,2,0	1/1:1,4:4:12.04:213,12,0	1/1:1,10:11:9.03:132,9,0	./.	1/1:1,6:7:8.99:108,9,0	1/1:1,9:10:6.02:108,6,0	1/1:1,7:8:8.99:127,9,0	./.	1/1:2,8:10:21.07:398,21,0	1/1:1,12:12:27.09:526,27,0	1/1:0,1:1:3.01:61,3,0
chr10	101060457	.	CTTTTT	C	2814.67	PASS	AB=0.800;AC=19;AF=0.339;AN=56;BaseQRankSum=6.208;DP=537;FS=2.847;HRun=19;HaplotypeScore=107.4954;InbreedingCoeff=0.8621;MQ=73.17;MQ0=7;MQRankSum=-5.958;QD=17.48;ReadPosRankSum=7.092;VQSLOD=-0.1504;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:17:12.04:0,12,209	1/1:6,6:12:11.76:168,12,0	0/0:50,0:23:23.85:0,24,460	0/0:23,0:15:10.22:0,10,276	0/0:22,0:35:87.29:0,87,1878	0/0:15,0:19:36.11:0,36,658	0/0:6,0:8:21.05:0,21,351	0/1:18,5:24:4.18:217,0,4	1/1:6,9:15:1.01:271,1,0	0/0:21,0:22:54.16:0,54,1016	0/0:23,0:27:65.86:0,66,1256	0/0:16,0:17:39.13:0,39,835	0/0:13,0:15:36.09:0,36,679	0/0:12,0:14:33.11:0,33,708	0/0:16,0:20:30.57:0,31,558	1/1:3,11:14:26.83:378,27,0	0/0:20,0:20:40.93:0,41,863	0/0:14,0:16:39.10:0,39,724	1/1:6,8:16:32.14:400,32,0	1/1:12,16:30:43.51:566,44,0	1/1:6,3:9:3.74:81,4,0	0/0:17,0:22:45.15:0,45,890	0/0:5,0:17:25.21:0,25,580	0/0:14,0:14:24.08:0,24,456	0/0:13,0:17:40.93:0,41,776	1/1:5,9:14:25.39:338,25,0	1/1:6,8:16:20.70:304,21,0	1/1:2,9:11:20.79:294,21,0
chr10	101064456	.	C	CTT	3719.97	PASS	AB=0.771;AC=28;AF=0.500;AN=56;BaseQRankSum=4.758;DP=461;FS=1.497;HRun=13;HaplotypeScore=76.3641;InbreedingCoeff=0.6938;MQ=74.69;MQ0=0;MQRankSum=-0.218;QD=13.68;ReadPosRankSum=-3.245;VQSLOD=1.9837;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,14:21:27.07:350,27,0	1/1:0,4:6:12.03:148,12,0	0/0:10,0:11:4.02:0,4,51	0/1:6,0:7:2.13:11,0,2	0/0:21,0:21:13.10:0,13,263	0/0:15,0:18:41.66:0,42,355	0/0:9,0:9:11.80:0,12,98	1/1:17,8:26:38.72:411,39,0	1/1:3,16:19:27.09:365,27,0	0/0:19,0:20:30.33:0,30,266	0/0:17,0:20:35.15:0,35,327	1/1:4,0:24:28.70:141,29,0	0/0:15,0:15:20.73:0,21,185	0/0:6,0:6:18:0,18,159	0/0:3,0:14:21.93:0,22,94	1/1:1,15:17:26.47:292,26,0	0/0:25,0:29:47.26:0,47,443	0/0:11,0:12:4.82:0,5,175	1/1:6,8:17:31.85:337,32,0	1/1:5,15:26:56.34:552,56,0	1/1:3,6:12:10.33:95,10,0	0/1:4,1:12:26.90:68,0,27	1/1:2,0:12:17.28:60,17,0	0/1:7,0:19:8.46:34,0,8	0/0:14,0:14:23.85:0,24,211	0/1:17,2:20:12.04:282,0,12	1/1:7,16:23:29.67:382,30,0	1/1:0,8:11:15.04:191,15,0
chr10	101064629	.	CTGT	C	483	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.026;DP=571;FS=5.568;HRun=0;HaplotypeScore=79.1594;InbreedingCoeff=0.9867;MQ=61.25;MQ0=0;MQRankSum=0.192;QD=28.41;ReadPosRankSum=1.298;VQSLOD=3.6144;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:48.14:0,48,949	0/0:6,0:6:18.06:0,18,366	0/0:20,0:17:33.08:0,33,593	0/0:16,0:14:27.56:0,28,449	0/0:35,0:35:90.31:0,90,1869	0/0:14,0:14:26.75:0,27,472	0/0:10,0:10:24.07:0,24,461	0/0:31,0:30:63.19:0,63,1165	0/0:20,0:20:54.17:0,54,1066	0/0:27,0:27:72.20:0,72,1387	0/0:32,0:32:90.29:0,90,1829	0/0:24,0:24:57.19:0,57,1184	0/0:20,0:20:48.15:0,48,957	0/0:13,0:13:33.09:0,33,645	1/1:3,14:17:39.13:578,39,0	0/0:13,0:12:36.12:0,36,748	0/0:20,0:20:57.18:0,57,1115	0/0:18,0:18:39.08:0,39,716	0/0:18,0:18:36.10:0,36,652	0/0:29,0:29:75.23:0,75,1477	0/0:19,0:19:48.10:0,48,846	0/0:19,0:19:48.15:0,48,953	0/0:20,0:20:54.12:0,54,955	0/0:21,0:21:50.17:0,50,1116	0/0:29,0:29:87.26:0,87,1697	0/0:30,0:30:75.18:0,75,1478	0/0:18,0:17:51.16:0,51,1000	0/0:10,0:10:30.09:0,30,586
chr10	101065588	.	A	AT	528.02	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-4.871;DP=405;FS=1.888;HRun=8;HaplotypeScore=37.2126;InbreedingCoeff=0.9133;MQ=64.75;MQ0=1;MQRankSum=-0.227;QD=20.31;ReadPosRankSum=1.270;VQSLOD=3.2226;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.02:0,72,654	0/0:6,0:6:15:0,15,137	0/0:15,0:12:26.18:0,26,257	0/0:12,0:9:11.92:0,12,94	0/0:24,1:25:60.02:0,60,549	0/0:19,0:19:54.01:0,54,491	0/0:5,0:5:15.01:0,15,137	0/0:29,0:29:69.01:0,69,627	0/0:9,0:9:24.01:0,24,219	0/0:21,0:21:63.02:0,63,569	0/0:21,0:21:57.02:0,57,519	1/1:2,8:10:24.03:262,24,0	0/0:10,0:10:27:0,27,243	0/0:12,0:12:30:0,30,268	0/0:12,0:12:36:0,36,324	0/0:11,0:11:33.01:0,33,297	0/0:23,0:23:57.02:0,57,521	0/0:13,0:13:36.02:0,36,329	0/0:24,0:24:57.01:0,57,521	0/0:14,0:14:39:0,39,351	0/0:3,0:3:6:0,6,55	1/1:0,6:6:15.04:173,15,0	1/1:1,5:6:15.04:173,15,0	1/1:2,2:4:6.02:69,6,0	0/0:11,0:11:33.02:0,33,302	0/0:19,0:19:48.02:0,48,439	0/0:27,0:27:68.99:0,69,617	0/0:10,0:10:30.02:0,30,275
chr10	101066587	.	A	AT	11954.22	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-16.330;DP=561;FS=0.677;HRun=4;HaplotypeScore=51.8040;InbreedingCoeff=0.9822;MQ=65.85;MQ0=0;MQRankSum=-1.314;QD=35.06;ReadPosRankSum=1.356;VQSLOD=5.1972;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:60.20:820,60,0	1/1:0,5:5:9.02:123,9,0	0/0:7,0:7:18.04:0,18,197	0/0:3,0:3:9.02:0,9,99	0/0:21,0:21:48.12:0,48,534	0/0:25,0:25:75.13:0,75,833	0/0:20,0:20:57.16:0,57,646	1/1:2,33:36:99:1326,99,0	1/1:1,17:18:48.16:656,48,0	0/0:23,0:23:57.16:0,57,646	0/0:20,0:20:57.16:0,57,646	1/1:0,23:23:63.21:861,63,0	0/0:22,0:22:63.18:0,63,714	0/0:21,0:21:60.14:0,60,659	1/1:1,18:19:51.17:698,51,0	1/1:1,13:14:36.12:485,36,0	0/0:20,0:20:54.11:0,54,598	0/0:18,0:18:54.07:0,54,583	1/1:3,18:21:54.15:706,54,0	1/1:2,31:33:81.27:1103,81,0	1/1:0,11:11:33.11:451,33,0	1/1:1,27:28:75.25:1025,75,0	1/1:1,27:28:78.26:1067,78,0	1/1:3,18:21:51.17:697,51,0	0/0:20,0:20:57.15:0,57,638	1/1:1,20:21:29.17:787,29,0	1/1:4,23:27:60.04:820,60,0	1/1:2,8:10:24.08:328,24,0
chr10	101067815	.	GC	G	797.73	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.404;DP=711;FS=0.776;HRun=3;HaplotypeScore=94.9561;InbreedingCoeff=0.9949;MQ=60.60;MQ0=3;MQRankSum=0.502;QD=29.55;ReadPosRankSum=2.314;VQSLOD=3.1661;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,169,2362	0/0:21,0:21:63.20:0,63,890	0/0:24,0:18:42.07:0,42,551	0/0:28,0:22:62.05:0,62,807	0/0:19,0:19:54.18:0,54,777	0/0:23,0:23:69.22:0,69,976	0/0:26,0:26:72.23:0,72,1018	0/0:37,0:37:99:0,108,1540	0/0:34,0:34:96.31:0,96,1363	0/0:19,0:19:54.18:0,54,762	0/0:20,0:20:60.19:0,60,845	0/0:28,0:28:84.24:0,84,1153	0/0:14,0:14:42.14:0,42,604	0/0:24,0:24:69.23:0,69,993	1/1:2,25:27:72.23:893,72,0	0/0:29,0:29:84.23:0,84,1167	0/0:40,0:40:99:0,120,1725	0/0:9,0:9:27.09:0,27,389	0/0:23,0:23:69.23:0,69,989	0/0:20,0:20:54.17:0,54,751	0/0:33,0:33:96.32:0,96,1382	0/0:21,0:21:63.21:0,63,906	0/0:25,0:24:75.24:0,75,1060	0/0:28,0:28:84.23:0,84,1165	0/0:18,0:18:54.17:0,54,759	0/0:27,0:27:78.25:0,78,1106	0/0:31,0:31:93.29:0,93,1302	0/0:7,0:7:21.06:0,21,285
chr10	101068253	.	G	GA	4119	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.428;DP=718;FS=8.336;HRun=3;HaplotypeScore=98.1104;InbreedingCoeff=0.9946;MQ=90.98;MQ0=0;MQRankSum=-1.276;QD=34.91;ReadPosRankSum=1.450;VQSLOD=3.6265;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,138,1656	0/0:12,0:12:28.37:0,28,161	0/0:22,0:22:54.17:0,54,647	0/0:35,0:35:93.16:0,93,1054	0/0:21,0:21:60.18:0,60,720	0/0:17,0:17:45.14:0,45,540	0/0:20,0:20:57.17:0,57,684	0/0:33,0:33:30.59:0,31,333	0/0:26,0:26:65.98:0,66,352	0/0:26,0:26:78.23:0,78,925	0/0:17,0:17:42.13:0,42,504	1/1:0,19:19:54.18:726,54,0	0/0:27,0:27:78.21:0,78,913	0/0:25,0:25:69.20:0,69,816	0/0:24,0:24:72.22:0,72,864	0/0:19,0:19:52.94:0,53,263	0/0:33,0:33:90.25:0,90,1065	0/0:15,0:15:45.10:0,45,514	0/0:25,0:25:68.20:0,68,341	0/0:22,0:22:32.10:0,32,289	0/0:48,0:48:91.33:0,91,617	1/1:2,32:34:78.25:1031,78,0	1/1:1,31:32:90.11:1195,90,0	1/1:2,31:33:87.29:1167,87,0	0/0:22,0:22:66.20:0,66,791	0/0:32,0:32:59.28:0,59,419	0/0:25,0:25:66.18:0,66,360	0/0:5,0:5:14.53:0,15,82
chr10	101069601	.	G	GT	938.23	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.482;DP=494;FS=0.821;HRun=1;HaplotypeScore=49.7899;InbreedingCoeff=0.8510;MQ=99.41;MQ0=0;MQRankSum=-2.702;QD=34.75;ReadPosRankSum=1.155;VQSLOD=3.4074;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:69.23:1033,69,0	0/0:3,0:3:9.03:0,9,117	0/0:31,0:31:81.19:0,81,981	0/0:28,0:28:43.70:0,44,824	0/0:16,0:16:48.13:0,48,607	0/0:19,0:19:57.19:0,57,739	0/0:34,0:34:99:0,102,1310	0/0:42,0:42:99:0,120,1502	0/0:10,0:10:30.06:0,30,359	0/0:14,0:14:39.12:0,39,495	0/0:15,0:15:45.15:0,45,584	0/0:13,0:13:36.12:0,36,467	0/0:10,0:10:27.07:0,27,332	0/0:12,0:12:36.12:0,36,466	0/0:12,0:12:36.12:0,36,467	0/0:18,0:18:51.14:0,51,633	0/0:27,0:27:78.24:0,78,997	0/0:20,0:20:54.18:0,54,699	0/0:14,0:14:39.13:0,39,506	0/0:10,0:10:27.09:0,27,350	0/0:31,0:31:87.28:0,87,1127	0/0:7,0:7:21.03:0,21,254	0/0:11,0:11:33.11:0,33,428	0/0:17,0:17:47.85:0,48,622	0/0:7,0:7:21.06:0,21,258	0/0:26,0:26:75.23:0,75,960	0/0:17,0:17:48.12:0,48,604	0/0:3,0:3:6.02:0,6,78
chr10	101070885	.	A	ATG	11442.08	PASS	AB=0.563;AC=31;AF=0.554;AN=56;BaseQRankSum=4.060;DP=631;FS=10.074;HRun=0;HaplotypeScore=116.9304;InbreedingCoeff=0.8520;MQ=63.18;MQ0=2;MQRankSum=-1.624;QD=30.27;ReadPosRankSum=0.531;VQSLOD=6.5054;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,12:27:33.09:510,33,0	1/1:6,6:12:29.87:432,30,0	0/0:26,0:16:14.11:0,14,180	0/0:28,0:17:6.79:0,7,199	0/0:29,0:30:78.01:0,78,914	0/0:22,0:23:60.01:0,60,718	0/0:21,0:21:42.10:0,42,513	0/1:4,12:18:27.62:550,0,28	1/1:12,14:26:54.07:837,54,0	0/0:23,0:23:60.12:0,60,689	0/0:20,0:20:57.14:0,57,679	1/1:9,17:25:54.18:878,54,0	0/0:20,0:20:45.14:0,45,567	0/0:13,0:13:33.08:0,33,404	1/1:8,0:18:35.34:285,35,0	1/1:9,12:21:28.22:697,28,0	0/0:22,0:22:47.94:0,48,551	0/0:9,0:9:1.07:0,1,207	1/1:5,13:17:7.45:614,7,0	1/1:12,15:27:63.18:990,63,0	1/1:11,34:45:81.28:1344,81,0	1/1:12,9:21:24.03:322,24,0	1/1:14,14:27:51.14:793,51,0	1/1:9,16:24:44.62:669,45,0	0/0:17,0:17:39.10:0,39,478	1/1:11,19:30:5.50:1060,5,0	1/1:9,18:27:72.23:1160,72,0	1/1:3,4:7:18.06:299,18,0
chr10	101070923	.	G	GTA	6566	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-0.792;DP=665;FS=5.903;HRun=0;HaplotypeScore=143.2313;InbreedingCoeff=0.9648;MQ=52.03;MQ0=8;MQRankSum=-3.171;QD=27.13;ReadPosRankSum=-0.504;VQSLOD=6.0496;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:38.49:0,38,312	1/1:6,7:14:39.11:614,39,0	0/0:38,0:9:14.18:0,14,173	0/0:37,0:11:28.37:0,28,224	0/0:31,0:31:57.09:0,57,813	0/0:20,0:20:21.01:0,21,489	0/0:29,0:29:74.52:0,75,803	1/1:26,0:24:59.67:482,60,0	1/1:14,7:21:36.53:604,37,0	0/0:23,0:23:68.71:0,69,781	0/0:24,0:24:66.08:0,66,736	0/0:11,0:28:49.56:0,50,314	0/0:18,0:18:45.01:0,45,472	0/0:14,0:14:29.67:0,30,352	1/1:16,0:16:2.61:80,3,0	1/1:8,10:19:48.07:677,48,0	0/0:25,0:24:46.35:0,46,602	0/0:15,0:15:14.07:0,14,310	1/1:14,3:17:41.96:459,42,0	1/1:9,20:30:59.42:942,59,0	1/1:30,6:36:61.37:813,61,0	0/0:7,0:19:31.84:0,32,194	0/0:13,0:27:49.55:0,50,327	0/0:9,0:27:34.73:0,35,210	0/0:18,0:18:41.47:0,41,391	1/1:15,9:24:16.17:628,16,0	1/1:13,14:27:55.77:900,56,0	1/1:2,7:12:24.05:366,24,0
chr10	101070925	.	ATATG	A	450.25	PASS	AB=0.910;AC=7;AF=0.125;AN=56;BaseQRankSum=2.624;DP=662;FS=4.246;HRun=0;HaplotypeScore=179.6969;InbreedingCoeff=0.1782;MQ=51.94;MQ0=8;MQRankSum=1.716;QD=3.11;ReadPosRankSum=-3.035;VQSLOD=1.7842;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:99:102,0,157	0/0:13,0:13:39.11:0,39,674	0/0:37,0:8:20.98:0,21,317	0/0:36,0:11:12.43:0,12,173	0/0:33,0:33:96.17:0,96,1960	0/0:21,0:21:57.12:0,57,1152	0/0:28,0:28:75.04:0,75,1519	0/0:23,0:21:60.03:0,60,772	0/0:20,0:20:50.88:0,51,826	0/0:24,0:24:72.16:0,72,1520	0/0:24,0:24:69.12:0,69,1446	0/1:23,5:28:23.82:112,0,24	0/0:18,0:18:45.05:0,45,828	0/0:14,0:14:38.98:0,39,797	0/0:14,0:15:29.94:0,30,291	0/0:20,0:20:57.07:0,57,798	0/0:24,0:23:55.35:0,55,1260	0/1:15,0:15:0.15:0,0,640	0/0:17,0:17:51.01:0,51,666	0/0:31,0:31:71.94:0,72,1136	0/0:35,0:35:86.98:0,87,1181	1/1:13,5:18:2.41:132,2,0	0/1:21,6:28:44.82:150,0,45	0/1:24,3:27:4.98:73,0,5	0/0:18,0:18:44.91:0,45,812	0/0:24,0:24:69.03:0,69,1018	0/0:26,0:26:75.15:0,75,1189	0/0:14,0:14:30.07:0,30,525
chr10	101070927	.	ATGTG	A	199.08	PASS	AB=0.868;AC=2;AF=0.036;AN=56;BaseQRankSum=-0.747;DP=659;FS=0.000;HRun=0;HaplotypeScore=180.4493;InbreedingCoeff=0.1554;MQ=51.88;MQ0=8;MQRankSum=1.970;QD=4.33;ReadPosRankSum=-0.942;VQSLOD=2.5679;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,8:28:30.49:269,0,30	0/0:15,0:15:39.13:0,39,743	0/0:35,0:8:9.03:0,9,214	0/0:40,0:12:0:0,0,0	0/0:30,0:31:75.24:0,75,1656	0/0:20,0:21:45.15:0,45,977	0/0:26,0:27:56.89:0,57,1172	0/0:23,0:21:24.02:0,24,402	0/0:19,0:19:38.89:0,39,707	0/0:25,0:25:59.97:0,60,1201	0/0:24,0:24:50.90:0,51,1096	0/0:27,0:27:35.88:0,36,325	0/0:18,0:18:27.09:0,27,577	0/0:13,0:13:29.84:0,30,649	0/0:7,0:15:26.95:0,27,268	0/0:20,0:20:33.11:0,33,578	0/0:22,0:22:48.11:0,48,1071	0/0:15,0:15:30.10:0,30,639	0/0:18,0:18:30.10:0,30,552	0/0:32,0:32:56.75:0,57,956	0/0:35,0:35:42.10:0,42,812	0/1:18,0:18:16.34:16,0,142	0/0:28,0:28:30.48:0,30,310	0/0:28,0:28:32.92:0,33,303	0/0:17,0:17:29.62:0,30,595	0/0:24,0:24:39.13:0,39,757	0/0:26,0:26:57.19:0,57,1010	0/0:14,0:14:24.08:0,24,483
chr10	101071054	.	A	AG	9647.81	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-9.934;DP=510;FS=3.722;HRun=5;HaplotypeScore=49.9634;InbreedingCoeff=0.9942;MQ=71.31;MQ0=0;MQRankSum=-3.334;QD=32.27;ReadPosRankSum=0.515;VQSLOD=5.3287;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:26:60.20:789,60,0	1/1:0,11:11:30.10:395,30,0	0/0:16,0:15:28.20:0,28,308	0/0:14,0:14:26.85:0,27,283	0/0:21,0:21:54.12:0,54,572	0/0:15,0:15:36.09:0,36,387	0/0:26,0:26:63.16:0,63,677	1/1:3,22:24:60.19:784,60,0	1/1:5,15:20:45.15:588,45,0	0/0:22,0:22:57.14:0,57,612	0/0:23,0:23:63.15:0,63,673	1/1:2,18:20:48.16:630,48,0	0/0:21,0:21:63.14:0,63,668	0/0:11,0:11:24.06:0,24,258	1/1:0,10:10:30.10:394,30,0	1/1:0,18:18:51.17:668,51,0	0/0:12,0:12:21.05:0,21,226	0/0:7,0:7:15.04:0,15,160	1/1:0,12:12:36.12:473,36,0	1/1:3,23:26:63.16:808,63,0	1/1:4,6:10:15.05:197,15,0	1/1:1,13:14:36.12:474,36,0	1/1:2,17:19:51.16:661,51,0	1/1:6,21:27:57.19:750,57,0	0/0:23,0:23:54.13:0,54,580	1/1:3,21:24:60.19:782,60,0	1/1:1,23:24:60.19:784,60,0	1/1:2,11:13:36.12:473,36,0
chr10	101071671	.	AT	A	7695.02	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=12.765;DP=579;FS=0.671;HRun=1;HaplotypeScore=58.6425;InbreedingCoeff=0.9904;MQ=83.91;MQ0=0;MQRankSum=-1.588;QD=38.86;ReadPosRankSum=-0.167;VQSLOD=5.1419;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.28:0,87,1353	1/1:0,13:13:36.12:503,36,0	0/0:29,0:27:71.66:0,72,1004	0/0:25,0:25:71.97:0,72,1075	0/0:31,0:31:93.30:0,93,1460	0/0:24,0:24:72.21:0,72,1102	0/0:14,0:14:42.06:0,42,640	1/1:0,22:22:66.19:874,66,0	1/1:0,24:24:66.22:923,66,0	0/0:27,0:27:81.26:0,81,1271	0/0:18,0:18:54.18:0,54,856	0/0:20,0:20:60.18:0,60,909	0/0:9,0:9:24.08:0,24,383	0/0:21,0:21:63.20:0,63,981	0/0:31,0:31:93.30:0,93,1463	1/1:0,15:15:42.14:587,42,0	0/0:13,0:13:39.13:0,39,623	0/0:4,0:4:9.03:0,9,143	1/1:0,23:23:69.23:961,69,0	1/1:0,28:28:84.14:1088,84,0	1/1:0,19:19:51.17:713,51,0	0/0:27,0:27:81.24:0,81,1218	0/0:25,0:25:75.24:0,75,1173	0/0:13,0:13:39.12:0,39,599	0/0:21,0:21:63.20:0,63,985	1/1:0,26:26:69.19:913,69,0	1/1:0,21:21:60.20:839,60,0	1/1:0,7:7:21.07:294,21,0
chr10	101087489	.	T	TAA	1479.27	PASS	AB=0.882;AC=22;AF=0.458;AN=48;BaseQRankSum=-2.895;DP=156;FS=1.556;HRun=8;HaplotypeScore=37.5917;InbreedingCoeff=0.5977;MQ=68.84;MQ0=3;MQRankSum=-1.811;QD=22.41;ReadPosRankSum=-0.106;VQSLOD=1.3437;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:15.04:0,15,167	1/1:0,2:2:6.02:95,6,0	0/1:11,0:9:4.38:4,0,102	./.	0/0:11,0:10:27.07:0,27,301	0/0:6,0:6:12.03:0,12,134	0/0:1,0:1:3.01:0,3,33	0/1:9,3:11:99:122,0,105	./.	0/0:6,0:6:18.03:0,18,192	0/0:5,0:5:14.97:0,15,151	1/1:2,0:2:4.99:17,5,0	0/0:3,0:3:9.02:0,9,100	0/0:4,0:3:3:0,3,33	0/0:0,0:1:2.74:0,3,12	1/1:0,2:2:6.02:95,6,0	0/0:18,0:17:48.08:0,48,518	0/0:13,0:13:36.10:0,36,400	1/1:0,5:3:9.03:139,9,0	1/1:2,1:1:3.01:48,3,0	./.	1/1:0,0:1:2.37:8,2,0	./.	1/1:0,0:1:2.22:7,2,0	0/0:10,0:10:29.75:0,30,311	1/1:0,9:9:27.09:428,27,0	1/1:1,6:8:24.07:352,24,0	1/1:0,7:7:21.07:333,21,0
chr10	101087591	.	CAAA	C	313.74	PASS	AC=12;AF=0.286;AN=42;BaseQRankSum=-0.896;DP=166;FS=32.283;HRun=14;HaplotypeScore=50.1826;InbreedingCoeff=0.7097;MQ=81.08;MQ0=2;MQRankSum=-1.687;QD=18.46;ReadPosRankSum=0.618;VQSLOD=0.0860;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:2:0:0,0,0	./.	0/0:27,0:11:8.59:0,9,143	0/0:17,0:10:9.84:0,10,117	0/0:9,0:12:27.02:0,27,357	0/0:8,0:8:12:0,12,171	0/0:3,0:5:9.03:0,9,156	1/1:0,5:6:13.60:172,14,0	0/0:1,0:1:0:0,0,0	0/0:22,0:22:42.06:0,42,579	0/0:9,0:10:19.11:0,19,178	./.	0/0:5,0:6:11.98:0,12,135	0/0:5,0:5:12.01:0,12,155	0/0:7,0:7:17.85:0,18,155	./.	0/0:6,0:7:15.05:0,15,221	0/0:9,0:9:18.03:0,18,283	1/1:2,2:4:6.02:69,6,0	./.	1/1:0,1:1:3.01:35,3,0	./.	./.	./.	0/0:8,0:8:15.05:0,15,256	1/1:1,3:4:9.01:105,9,0	1/1:0,1:1:3.01:35,3,0	1/1:0,1:1:3.01:35,3,0
chr10	101088075	.	CAAT	C	569.53	PASS	AB=0.650;AC=17;AF=0.315;AN=54;BaseQRankSum=7.159;DP=227;FS=18.108;HRun=0;HaplotypeScore=158.6521;InbreedingCoeff=0.8095;MQ=71.27;MQ0=0;MQRankSum=-3.992;QD=10.17;ReadPosRankSum=6.170;VQSLOD=1.6719;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:32.97:0,33,405	1/1:1,3:4:5.95:42,6,0	0/0:12,0:12:33:0,33,348	0/0:10,0:10:26.93:0,27,285	0/0:9,0:8:18.01:0,18,198	0/0:8,0:8:24.01:0,24,258	0/0:10,0:10:30.09:0,30,392	./.	1/1:2,7:9:20.83:145,21,0	0/0:13,0:13:30.09:0,30,381	0/0:8,0:8:23.77:0,24,236	0/0:6,0:6:18.05:0,18,214	0/0:6,0:6:11.97:0,12,127	0/0:11,0:11:30.09:0,30,410	0/0:7,0:7:20.92:0,21,239	1/1:0,6:6:17.86:125,18,0	0/0:7,0:7:18.05:0,18,267	0/0:5,0:5:10.58:0,11,116	1/1:5,1:6:2.97:21,3,0	1/1:1,4:6:14.88:104,15,0	1/1:1,3:4:8.63:52,9,0	0/0:12,0:12:33.02:0,33,379	0/0:11,0:11:24.04:0,24,267	0/0:6,0:6:11.90:0,12,119	0/0:15,0:15:39.12:0,39,491	0/1:6,7:13:13.04:121,0,13	1/1:1,5:6:14.88:104,15,0	1/1:0,2:2:5.95:42,6,0
chr10	101088113	.	AC	A	132.29	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.640;DP=365;FS=0.000;HRun=3;HaplotypeScore=161.1792;InbreedingCoeff=0.9037;MQ=68.51;MQ0=0;MQRankSum=-2.448;QD=18.90;ReadPosRankSum=0.115;VQSLOD=2.7883;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:48.12:0,48,664	0/0:8,0:8:18.06:0,18,250	0/0:17,0:16:50.64:0,51,683	0/0:22,0:21:66.17:0,66,898	0/0:24,0:24:63.13:0,63,855	0/0:12,0:12:27.09:0,27,388	0/0:14,0:14:33.11:0,33,474	0/0:15,0:15:45.15:0,45,647	0/0:12,0:12:33.09:0,33,455	0/0:16,0:16:44.89:0,45,643	0/0:10,0:10:30.10:0,30,429	0/0:14,0:14:36.02:0,36,449	0/0:12,0:12:33.11:0,33,473	0/0:14,0:14:39.13:0,39,560	1/1:0,7:7:18.06:223,18,0	0/0:8,0:8:21.07:0,21,302	0/0:11,0:11:33.07:0,33,451	0/0:7,0:7:21.07:0,21,302	0/0:21,0:21:63.20:0,63,889	0/0:10,0:10:30.10:0,30,431	0/0:7,0:7:15.05:0,15,215	0/0:13,0:13:33.10:0,33,456	0/0:10,0:10:27.09:0,27,387	0/0:12,0:12:36.12:0,36,517	0/0:16,0:16:39.13:0,39,560	0/0:16,0:16:48.15:0,48,669	0/0:10,0:9:24.04:0,24,317	0/0:5,0:5:9.03:0,9,130
chr10	101089483	.	TAC	T	12081.09	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=14.544;DP=832;FS=0.000;HRun=0;HaplotypeScore=110.9845;InbreedingCoeff=0.9896;MQ=61.98;MQ0=12;MQRankSum=-0.321;QD=24.76;ReadPosRankSum=3.098;VQSLOD=5.2344;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,37:52:80.91:949,81,0	1/1:4,12:16:30.09:369,30,0	0/0:43,0:27:47.74:0,48,703	0/0:41,0:30:17.50:0,17,725	0/0:24,0:24:66.23:0,66,1071	0/0:24,0:24:26.37:0,26,912	0/0:27,0:27:20.23:0,20,802	1/1:12,29:39:74.96:911,75,0	1/1:8,24:32:63.20:776,63,0	0/0:40,0:40:99:0,111,1748	0/0:22,0:22:63.21:0,63,1022	1/1:3,38:39:87.10:1048,87,0	0/0:23,0:23:63.21:0,63,1001	0/0:32,0:32:81.24:0,81,1258	1/1:8,33:39:73.57:1009,74,0	1/1:4,30:35:77.44:909,77,0	0/0:26,0:26:60.18:0,60,935	0/0:15,0:15:42.59:0,43,659	1/1:3,13:15:39.12:470,39,0	1/1:1,22:23:48.15:591,48,0	1/1:5,35:41:98.97:1173,99,0	1/1:4,15:19:33.10:406,33,0	1/1:2,15:17:42.13:517,42,0	1/1:10,26:36:72.23:884,72,0	0/0:27,0:27:63.22:0,63,1027	1/1:3,29:32:87.26:1058,87,0	1/1:6,32:37:75.07:900,75,0	1/1:2,3:5:9.03:111,9,0
chr10	101090462	.	ACACACACACACACTT	A	379.99	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=4.293;DP=521;FS=0.000;HRun=0;HaplotypeScore=165.0815;InbreedingCoeff=0.5198;MQ=55.96;MQ0=27;MQRankSum=-2.735;QD=3.39;ReadPosRankSum=-2.389;VQSLOD=2.0614;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:16:7.01:105,7,0	0/0:7,0:7:15.05:0,15,330	0/0:34,0:11:27.07:0,27,543	0/0:55,0:22:54.05:0,54,947	0/0:20,0:20:49.05:0,49,1718	0/0:20,0:16:42.97:0,43,1009	0/0:30,0:30:65.82:0,66,1543	0/0:20,0:20:50.82:0,51,1101	0/0:11,0:11:30.10:0,30,668	0/0:19,0:16:40.91:0,41,1058	0/0:3,0:3:9.03:0,9,294	1/1:5,13:18:3.18:133,3,0	0/0:8,0:8:14.64:0,15,607	0/0:11,0:10:18.53:0,19,481	0/1:9,0:9:25.10:25,0,278	0/0:13,0:13:30.09:0,30,535	0/0:34,0:33:84.23:0,84,2511	0/0:19,0:18:44.52:0,45,1404	0/0:12,0:11:21.07:0,21,465	0/0:19,0:19:44.31:0,44,886	0/0:44,0:41:84.13:0,84,1726	1/1:12,0:12:3.79:53,4,0	1/1:6,0:6:6.96:106,7,0	1/1:26,0:24:2.68:51,3,0	0/0:12,0:9:8.22:0,8,297	0/1:16,0:16:8.11:8,0,583	0/0:17,0:17:31.46:0,31,686	0/1:8,0:8:51.04:51,0,192
chr10	101090474	.	ACTT	A	584.59	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.266;DP=490;FS=0.000;HRun=0;HaplotypeScore=75.5910;InbreedingCoeff=0.7990;MQ=68.54;MQ0=17;MQRankSum=-1.201;QD=7.49;ReadPosRankSum=2.627;VQSLOD=1.8995;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:16:5.96:103,6,0	0/0:8,0:8:18.06:0,18,388	0/0:41,0:17:44.70:0,45,905	0/0:60,0:27:66.08:0,66,1177	0/0:21,0:21:54.01:0,54,1181	0/0:16,0:14:38.68:0,39,700	0/0:26,0:26:66.16:0,66,1376	0/0:22,0:22:53.23:0,53,1229	0/0:13,0:13:36.12:0,36,797	0/0:18,0:16:36.09:0,36,765	0/0:4,0:4:12.04:0,12,241	1/1:14,0:14:2.60:38,3,0	0/0:7,0:7:18.06:0,18,368	0/0:13,0:12:29.79:0,30,645	1/1:10,0:10:16.02:391,16,0	0/0:11,0:11:30.10:0,30,643	0/0:26,0:26:72.19:0,72,1502	0/0:13,0:13:39.10:0,39,768	0/0:16,0:16:42.14:0,42,946	0/0:19,0:19:48.55:0,49,949	0/0:38,0:37:96.17:0,96,1917	1/1:2,7:9:2.07:49,2,0	1/1:4,0:4:5.27:103,5,0	1/1:3,21:24:3.01:51,3,0	0/0:10,0:8:21.07:0,21,466	0/0:13,0:13:39.13:0,39,883	0/0:14,0:14:39.13:0,39,839	0/0:3,0:3:9.03:0,9,201
chr10	101090475	.	CT	C	208.25	PASS	AB=0.625;AC=11;AF=0.196;AN=56;BaseQRankSum=5.834;DP=488;FS=0.000;HRun=2;HaplotypeScore=63.7032;InbreedingCoeff=0.7132;MQ=68.77;MQ0=15;MQRankSum=-0.424;QD=2.67;ReadPosRankSum=2.745;VQSLOD=-0.4438;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:16:5.99:55,6,0	0/0:8,0:8:18.06:0,18,267	0/0:41,0:17:46.36:0,46,614	0/0:60,0:27:72.07:0,72,912	0/0:21,0:21:54.18:0,54,806	0/0:16,0:14:35.92:0,36,438	0/0:25,0:25:66.03:0,66,939	0/0:22,0:22:57.18:0,57,834	0/0:13,0:13:36.12:0,36,537	0/0:16,0:15:42.11:0,42,570	0/0:4,0:4:12.04:0,12,170	1/1:14,0:14:2.76:19,3,0	0/0:7,0:7:18.04:0,18,247	0/0:12,0:12:29.75:0,30,422	0/1:4,6:10:3.82:155,0,4	0/0:11,0:11:30.06:0,30,424	0/0:27,0:27:72.24:0,72,1052	0/0:13,0:13:39.03:0,39,517	0/0:16,0:16:48.09:0,48,674	0/0:19,0:19:45.10:0,45,627	0/0:38,0:37:95.93:0,96,1279	1/1:9,0:9:2.50:34,2,0	1/1:2,2:4:5.82:53,6,0	1/1:24,0:24:3.01:33,3,0	0/0:10,0:8:21.04:0,21,312	0/0:14,0:14:42.13:0,42,610	0/0:14,0:14:39.12:0,39,564	0/0:3,0:3:9.03:0,9,135
chr10	101091523	.	TC	T	3227.04	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=7.259;DP=440;FS=13.390;HRun=2;HaplotypeScore=74.8560;InbreedingCoeff=0.9563;MQ=81.71;MQ0=5;MQRankSum=-2.458;QD=20.69;ReadPosRankSum=-0.623;VQSLOD=2.2149;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:45.11:0,45,600	1/1:1,5:6:12.90:116,13,0	0/0:29,0:13:24.18:0,24,204	0/0:32,0:18:30.56:0,31,235	0/0:28,0:28:84.07:0,84,1060	0/0:16,0:16:45.13:0,45,627	0/0:12,0:12:36.09:0,36,463	1/1:7,26:33:65.26:701,65,0	1/1:0,6:6:12.02:118,12,0	0/0:21,0:21:63.18:0,63,842	0/0:21,0:21:60.16:0,60,799	0/0:8,0:8:11.98:0,12,98	0/0:6,0:6:18.05:0,18,240	0/0:13,0:13:36.04:0,36,437	0/0:12,0:12:29.97:0,30,246	1/1:4,0:4:9:76,9,0	0/0:9,0:9:27.09:0,27,385	0/0:24,0:24:69.13:0,69,902	1/1:2,21:23:64.77:576,65,0	1/1:1,23:24:57.85:529,58,0	1/1:3,4:7:17.91:171,18,0	0/0:5,0:5:15:0,15,134	0/0:10,0:10:23.84:0,24,181	0/0:3,0:3:5.99:0,6,49	0/0:19,0:19:48.16:0,48,689	1/1:8,15:23:21.31:535,21,0	1/1:5,9:14:36.41:325,36,0	1/1:2,14:16:31.82:296,32,0
chr10	101091525	.	C	CT	789.54	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-0.032;DP=436;FS=0.649;HRun=7;HaplotypeScore=83.6837;InbreedingCoeff=0.8569;MQ=81.01;MQ0=5;MQRankSum=1.907;QD=15.18;ReadPosRankSum=2.379;VQSLOD=3.6499;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:9.44:96,9,0	0/0:7,0:7:13.60:0,14,59	0/0:29,0:12:6.59:0,7,106	0/0:32,0:18:4.07:0,4,117	0/0:28,0:28:69.07:0,69,651	0/0:16,0:16:42.07:0,42,405	0/0:12,0:12:27.04:0,27,260	0/0:34,0:34:69.48:0,69,264	0/0:6,0:6:10.47:0,10,42	0/0:20,0:20:54.05:0,54,504	0/0:20,0:20:54.05:0,54,511	1/1:0,8:8:11.82:145,12,0	0/0:6,0:6:18.03:0,18,174	0/0:13,0:13:30.02:0,30,279	1/1:1,11:12:27.08:326,27,0	0/0:4,0:4:1.51:0,2,4	0/0:10,0:10:26.97:0,27,244	0/0:24,0:24:69.07:0,69,647	0/0:23,0:23:41.46:0,41,155	0/0:24,0:24:47.73:0,48,202	0/0:7,0:7:13.26:0,13,55	1/1:1,4:5:11.95:126,12,0	1/1:1,8:9:17.97:198,18,0	1/1:0,3:3:6.02:72,6,0	0/0:19,0:19:48.08:0,48,463	0/0:20,0:20:44.04:0,44,187	0/0:14,0:14:34.78:0,35,145	0/0:16,0:16:32.26:0,32,136
chr10	101091532	.	T	TA	528.33	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=0.688;DP=412;FS=1.436;HRun=8;HaplotypeScore=81.7402;InbreedingCoeff=0.8824;MQ=78.79;MQ0=7;MQRankSum=-0.492;QD=10.78;ReadPosRankSum=2.689;VQSLOD=2.5134;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:16:39.07:436,39,0	0/0:7,0:7:11.35:0,11,40	0/0:28,0:9:14.77:0,15,108	0/0:31,0:17:15.88:0,16,81	0/0:25,0:25:62.99:0,63,568	0/0:16,0:16:45.01:0,45,406	0/0:10,0:10:29.99:0,30,266	0/0:36,0:35:60.73:0,61,245	0/0:5,0:5:8.70:0,9,27	0/0:20,0:20:48.01:0,48,433	0/0:19,0:19:51:0,51,459	1/1:7,0:7:10.26:43,10,0	0/0:6,0:6:18.01:0,18,165	0/0:12,0:12:24:0,24,219	1/1:11,0:11:24.11:101,24,0	0/0:3,0:3:6.07:0,6,38	0/0:9,0:9:24.01:0,24,219	0/0:27,0:27:71.97:0,72,639	0/0:17,0:17:34.14:0,34,116	0/0:21,0:21:36.69:0,37,133	0/0:5,0:5:8.70:0,9,27	1/1:4,0:4:7.85:32,8,0	1/1:8,0:8:13.84:66,14,0	1/1:3,0:3:5.42:23,5,0	0/0:18,0:18:48.01:0,48,435	0/0:19,0:19:40.81:0,41,147	0/0:14,0:14:14.97:0,15,50	0/0:15,0:15:21.47:0,21,66
chr10	101091844	.	ATTG	A	1061.36	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=5.232;DP=499;FS=6.690;HRun=0;HaplotypeScore=70.2583;InbreedingCoeff=0.8740;MQ=42.06;MQ0=46;MQRankSum=-5.750;QD=18.62;ReadPosRankSum=-0.703;VQSLOD=2.6126;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:16:18.06:0,18,365	0/0:6,0:5:12.04:0,12,264	./.	./.	0/0:16,0:14:36.12:0,36,792	0/0:19,0:16:24.08:0,24,498	0/0:19,0:16:24.08:0,24,529	0/0:21,0:12:33.11:0,33,714	0/0:20,0:19:45.15:0,45,961	0/0:14,0:10:30.10:0,30,662	0/0:17,0:16:39.10:0,39,735	1/1:3,14:12:33.11:530,33,0	0/0:14,0:13:27.07:0,27,551	0/0:18,0:16:33.11:0,33,723	0/0:13,0:8:21.07:0,21,454	0/0:18,0:13:33.11:0,33,711	0/0:37,0:36:72.25:0,72,1537	0/0:34,0:28:57.17:0,57,1170	0/0:29,0:22:57.16:0,57,1155	0/0:14,0:11:30.09:0,30,620	0/0:38,0:32:60.20:0,60,1221	1/1:1,6:5:6.02:96,6,0	1/1:1,17:15:33.11:529,33,0	1/1:9,6:6:3.01:48,3,0	0/0:18,0:16:30.09:0,30,591	0/0:16,0:14:42.14:0,42,911	0/0:25,0:24:38.31:0,38,918	0/0:7,0:6:6:0,6,89
chr10	101091939	.	T	TG	3549.56	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=7.269;DP=527;FS=14.702;HRun=1;HaplotypeScore=75.7923;InbreedingCoeff=0.4243;MQ=67.45;MQ0=0;MQRankSum=-3.741;QD=11.95;ReadPosRankSum=5.490;VQSLOD=0.5285;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:24.05:375,24,0	0/1:5,0:5:7.14:12,0,7	0/0:19,0:19:49.64:0,50,480	0/0:12,0:12:26.78:0,27,223	0/0:22,0:22:54.10:0,54,636	0/0:17,0:17:42.08:0,42,509	0/0:22,0:22:63.07:0,63,727	0/1:23,0:23:36.04:36,0,126	0/1:20,0:20:22.46:67,0,22	0/0:12,0:12:33.05:0,33,375	0/0:15,0:15:42.07:0,42,466	1/1:4,18:21:32.75:607,33,0	0/0:21,0:21:57.15:0,57,704	0/0:18,0:18:41.93:0,42,548	1/1:18,0:18:36.04:340,36,0	0/1:21,0:21:43.77:44,0,46	0/0:37,0:37:99:0,102,1251	0/0:16,0:16:38.88:0,39,488	0/1:15,0:15:11.95:12,0,120	0/1:15,0:15:38.06:38,0,79	1/1:20,0:20:7.93:77,8,0	1/1:3,16:19:31.77:469,32,0	1/1:5,13:18:45.04:617,45,0	1/1:4,17:21:51.11:699,51,0	0/0:19,0:19:54.15:0,54,659	0/1:21,0:21:45.69:46,0,59	0/1:14,0:14:32.21:32,0,50	1/1:9,0:9:20.95:78,21,0
chr10	101091940	.	G	GGTTT	2594.69	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=3.199;DP=540;FS=1.390;HRun=0;HaplotypeScore=111.2404;InbreedingCoeff=0.8769;MQ=68.00;MQ0=0;MQRankSum=-3.636;QD=18.14;ReadPosRankSum=1.927;VQSLOD=3.5418;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:40:48.12:1158,48,0	0/0:0,0:5:11.88:0,12,84	0/0:16,0:18:50.80:0,51,647	0/0:11,0:13:26.80:0,27,305	0/0:23,0:23:54.05:0,54,943	0/0:17,0:17:42.09:0,42,754	0/0:22,0:22:63.04:0,63,1043	0/0:7,0:23:60.06:0,60,489	0/0:2,0:21:52.90:0,53,423	0/0:13,0:13:33.03:0,33,516	0/0:15,0:15:42.05:0,42,648	0/1:23,0:22:31.72:80,0,32	0/0:20,0:21:57.18:0,57,1083	0/0:17,0:18:48.05:0,48,848	1/1:2,18:21:42.05:998,42,0	0/0:3,0:22:46.06:0,46,344	0/0:35,0:37:99:0,111,1875	0/0:15,0:16:44.85:0,45,750	0/0:5,0:16:16.17:0,16,350	0/0:5,0:15:34.42:0,34,308	0/0:2,0:18:36.32:0,36,293	1/1:19,0:19:28.89:168,29,0	1/1:17,0:19:38.29:176,38,0	1/1:19,0:21:42.02:194,42,0	0/0:20,0:20:54.11:0,54,997	0/0:8,0:21:24.97:0,25,349	0/0:4,0:14:32.85:0,33,255	0/0:0,0:9:26.22:0,26,184
chr10	101092749	.	TC	T	953.98	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.457;DP=661;FS=22.410;HRun=2;HaplotypeScore=68.6959;InbreedingCoeff=0.9994;MQ=92.52;MQ0=0;MQRankSum=-1.609;QD=32.90;ReadPosRankSum=3.896;VQSLOD=1.9080;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1790	0/0:12,0:12:36.12:0,36,539	0/0:29,0:29:86.96:0,87,1161	0/0:27,0:27:75.19:0,75,1046	0/0:18,0:18:54.15:0,54,745	0/0:14,0:14:42.13:0,42,606	0/0:27,0:27:78.26:0,78,1147	0/0:33,0:33:99:0,99,1446	0/0:13,0:13:36.07:0,36,450	0/0:15,0:15:42.14:0,42,624	0/0:15,0:15:45.13:0,45,632	0/0:26,0:26:75.20:0,75,1068	0/0:18,0:18:54.18:0,54,808	0/0:21,0:21:60.19:0,60,877	1/1:1,28:29:81.26:1049,81,0	0/0:28,0:28:84.26:0,84,1211	0/0:42,0:42:99:0,120,1775	0/0:16,0:16:48.12:0,48,687	0/0:23,0:23:63.14:0,63,878	0/0:27,0:27:81.27:0,81,1211	0/0:41,0:41:99:0,120,1747	0/0:29,0:29:84.25:0,84,1196	0/0:17,0:17:48.15:0,48,699	0/0:27,0:27:81.16:0,81,1164	0/0:21,0:21:63.18:0,63,919	0/0:20,0:20:57.19:0,57,852	0/0:20,0:20:60.12:0,60,869	0/0:11,0:11:33.09:0,33,473
chr10	101094648	.	A	AT	270.46	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.982;DP=494;FS=1.085;HRun=9;HaplotypeScore=72.1570;InbreedingCoeff=0.8918;MQ=72.13;MQ0=0;MQRankSum=-0.224;QD=13.52;ReadPosRankSum=-0.676;VQSLOD=3.5035;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,15:20:33.09:365,33,0	0/0:9,0:9:20.99:0,21,182	0/0:14,0:13:8.44:0,8,144	0/0:5,0:5:11.86:0,12,90	0/0:31,0:31:53.79:0,54,695	0/0:17,0:17:47.95:0,48,408	0/0:8,0:8:20.99:0,21,182	0/0:36,0:36:92.18:0,92,785	0/0:14,0:14:29.98:0,30,260	0/0:23,0:23:56.97:0,57,494	0/0:16,0:16:47.97:0,48,413	0/0:14,0:14:32.96:0,33,280	0/0:12,0:13:32.03:0,32,266	0/0:16,0:16:44.96:0,45,386	0/0:19,0:19:41.38:0,41,359	0/0:18,0:19:53:0,53,445	0/0:19,0:20:55.98:0,56,468	0/0:22,0:22:53.94:0,54,462	0/0:25,0:25:56.95:0,57,490	0/0:22,0:22:65.99:0,66,572	0/0:8,0:8:17.99:0,18,156	0/0:13,0:13:35.99:0,36,313	0/0:10,0:10:29.99:0,30,260	0/0:7,0:7:21:0,21,182	0/0:19,0:19:56.99:0,57,495	0/0:24,0:24:68.98:0,69,599	0/0:40,0:40:92.96:0,93,807	0/0:10,0:10:26.99:0,27,234
chr10	101095209	.	TGGTTGG	T	731.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.879;DP=604;FS=0.000;HRun=0;HaplotypeScore=134.4548;InbreedingCoeff=0.8471;MQ=63.17;MQ0=8;MQRankSum=-6.315;QD=48.80;ReadPosRankSum=0.114;VQSLOD=3.4763;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:87.30:0,87,2875	0/0:1,0:1:3.01:0,3,107	0/0:39,0:20:38.36:0,38,1269	0/0:31,0:12:24.87:0,25,389	0/0:38,0:38:99:0,113,3769	0/0:16,0:16:48.03:0,48,1528	0/0:23,0:23:69.24:0,69,2269	0/0:30,0:29:84.29:0,84,2500	0/0:12,0:12:33.11:0,33,1143	0/0:26,0:26:78.27:0,78,2579	0/0:16,0:16:48.15:0,48,1562	0/0:21,0:21:60.21:0,60,1854	0/0:16,0:16:39.13:0,39,1300	0/0:18,0:18:51.18:0,51,1708	1/1:4,5:15:45.15:827,45,0	0/0:18,0:18:54.19:0,54,1696	0/0:27,0:26:22.31:0,22,2315	0/0:18,0:18:45.04:0,45,1322	0/0:15,0:15:45.15:0,45,1442	0/0:30,0:30:84.29:0,84,2775	0/0:15,0:15:45.14:0,45,1392	0/0:19,0:19:53.27:0,53,1734	0/0:16,0:16:48.16:0,48,1568	0/0:20,0:20:60.21:0,60,2002	0/0:21,0:21:60.21:0,60,2126	0/0:21,0:21:58.08:0,58,1952	0/0:23,0:23:56.78:0,57,1784	0/0:22,0:22:51.18:0,51,1583
chr10	101095218	.	T	TG	94.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.522;DP=620;FS=6.740;HRun=0;HaplotypeScore=94.2575;InbreedingCoeff=0.6017;MQ=59.07;MQ0=14;MQRankSum=-4.506;QD=5.27;ReadPosRankSum=-1.802;VQSLOD=2.5811;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:84.20:0,84,1130	0/0:2,0:2:3.01:0,3,42	0/0:38,1:15:10.40:0,10,264	0/0:29,0:10:11.41:0,11,92	0/0:41,0:41:99:0,122,1546	0/0:20,0:20:60.07:0,60,749	0/0:25,0:24:69.16:0,69,910	0/0:27,0:26:75.20:0,75,967	0/0:16,0:16:30.07:0,30,397	0/0:26,0:26:78.24:0,78,1056	0/0:17,0:17:51.15:0,51,669	0/0:19,0:19:54.15:0,54,704	0/0:17,0:17:39.13:0,39,540	0/0:20,0:20:47.93:0,48,624	1/1:13,5:18:2.94:172,3,0	0/0:19,0:19:55.03:0,55,668	0/0:26,0:25:55.25:0,55,892	0/0:22,0:22:59.92:0,60,706	0/0:18,0:17:51.08:0,51,652	0/0:29,0:28:75.19:0,75,993	0/0:12,0:12:36.11:0,36,488	0/0:15,0:15:43.94:0,44,563	0/0:17,0:17:51.15:0,51,681	0/0:18,0:18:48.15:0,48,654	0/0:24,0:24:60.19:0,60,824	0/0:23,0:23:62.73:0,63,787	0/0:24,0:24:51.10:0,51,639	0/0:19,0:19:42.09:0,42,535
chr10	101095731	.	CT	C	1200.80	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.449;DP=628;FS=13.563;HRun=1;HaplotypeScore=68.9696;InbreedingCoeff=0.9909;MQ=78.90;MQ0=0;MQRankSum=-3.384;QD=34.31;ReadPosRankSum=0.885;VQSLOD=2.1779;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:92.82:1296,93,0	0/0:6,0:6:18.06:0,18,287	0/0:24,0:24:71.78:0,72,1051	0/0:10,0:10:30.10:0,30,473	0/0:24,0:24:66.21:0,66,1028	0/0:22,0:22:63.15:0,63,955	0/0:14,0:14:42.14:0,42,671	0/0:34,0:34:99:0,102,1454	0/0:12,0:12:36.11:0,36,550	0/0:33,0:33:99:0,99,1561	0/0:19,0:19:54.17:0,54,837	0/0:18,0:18:54.17:0,54,840	0/0:19,0:19:57.19:0,57,908	0/0:18,0:18:54.18:0,54,861	0/0:22,0:22:60.14:0,60,905	0/0:23,0:22:69.17:0,69,1068	0/0:53,0:53:99:0,159,2421	0/0:24,0:24:72.22:0,72,1121	0/0:19,0:19:54.18:0,54,835	0/0:17,0:17:51.16:0,51,788	0/0:33,0:33:96.31:0,96,1508	0/0:16,0:16:48.16:0,48,765	0/0:22,0:22:60.17:0,60,907	0/0:24,0:24:68.87:0,69,1054	0/0:31,0:31:90.31:0,90,1432	0/0:23,0:23:63.21:0,63,985	0/0:23,0:23:69.23:0,69,1092	0/0:10,0:10:30.10:0,30,478
chr10	101095912	.	TGTGA	T	137.54	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.853;DP=549;FS=12.076;HRun=0;HaplotypeScore=144.8809;InbreedingCoeff=0.9483;MQ=63.11;MQ0=0;MQRankSum=-3.063;QD=13.75;ReadPosRankSum=-2.188;VQSLOD=2.1711;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:51.15:0,51,1330	0/0:13,0:13:33.11:0,33,889	0/0:23,0:18:45.01:0,45,1178	0/0:24,0:22:60.15:0,60,1414	0/0:21,0:21:60.19:0,60,1563	0/0:16,0:16:48.16:0,48,1234	0/0:23,0:23:63.22:0,63,1661	0/0:30,0:30:87.29:0,87,2182	0/0:18,0:18:33.09:0,33,856	0/0:15,0:15:45.15:0,45,1129	0/0:9,0:9:27.09:0,27,696	0/0:17,0:17:45.15:0,45,1213	0/0:20,0:20:54.19:0,54,1399	0/0:27,0:27:81.26:0,81,2114	1/1:1,9:10:15.05:226,15,0	0/0:13,0:13:33.10:0,33,811	0/0:37,0:37:99:0,105,2783	0/0:31,0:30:87.30:0,87,2320	0/0:14,0:14:39.09:0,39,975	0/0:19,0:19:52.95:0,53,1283	0/0:27,0:27:53.66:0,54,1361	0/0:11,0:10:16.45:0,16,406	0/0:12,0:12:15.73:0,16,384	0/0:27,0:27:47.82:0,48,1229	0/0:19,0:19:54.14:0,54,1323	0/0:29,0:29:72.21:0,72,1836	0/0:15,0:15:23.90:0,24,600	0/0:6,0:6:18.06:0,18,485
chr10	101095946	.	TGTGTGC	T	4976.91	PASS	AB=0.668;AC=27;AF=0.482;AN=56;BaseQRankSum=9.334;DP=602;FS=0.949;HRun=0;HaplotypeScore=163.6605;InbreedingCoeff=0.7187;MQ=56.36;MQ0=7;MQRankSum=-6.961;QD=17.77;ReadPosRankSum=-3.089;VQSLOD=3.9461;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,14:24:9.02:181,9,0	1/1:5,9:14:12.04:261,12,0	0/0:34,0:16:3.73:0,4,299	0/0:40,0:20:35.51:0,36,553	0/0:23,0:23:66.21:0,66,2001	0/0:21,0:21:48.16:0,48,1529	0/0:28,0:28:66.22:0,66,2154	1/1:6,23:29:66.17:1274,66,0	1/1:3,14:16:11.70:268,12,0	0/0:20,0:20:48.15:0,48,1265	0/0:7,0:7:21.07:0,21,683	1/1:4,2:6:2.99:24,3,0	0/0:19,0:19:51.18:0,51,1577	0/0:22,0:22:57.19:0,57,1727	0/0:8,0:7:6.02:0,6,169	1/1:3,7:10:15.04:275,15,0	0/0:44,0:44:99:0,123,3912	0/0:35,0:34:87.30:0,87,2806	1/1:4,10:14:29.98:496,30,0	0/1:2,14:16:0:0,0,0	0/1:36,7:41:12.92:214,0,13	1/1:6,8:14:9.82:158,10,0	1/1:1,13:14:0.45:1,0,0	1/1:20,13:33:14.98:240,15,0	0/0:21,0:21:54.19:0,54,1746	0/1:9,16:25:31.29:915,0,31	1/1:1,16:17:21.07:443,21,0	1/1:0,4:4:12.04:227,12,0
chr10	101095948	.	TGTGC	T	1544.33	PASS	AB=0.941;AC=17;AF=0.304;AN=56;BaseQRankSum=12.845;DP=595;FS=0.961;HRun=0;HaplotypeScore=158.5704;InbreedingCoeff=0.3831;MQ=57.17;MQ0=8;MQRankSum=-6.247;QD=6.49;ReadPosRankSum=-1.743;VQSLOD=2.4783;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,1:24:12.87:66,0,13	0/1:14,1:15:42.77:99,0,43	0/0:34,0:16:1.99:0,2,439	0/0:40,0:19:44.72:0,45,695	0/0:23,0:23:69.24:0,69,1653	0/0:21,0:21:48.14:0,48,1171	0/0:28,0:28:72.23:0,72,1829	1/1:26,0:26:28.74:425,29,0	0/1:16,1:17:1.99:116,0,2	0/0:20,0:20:57.08:0,57,1107	0/0:7,0:7:21.07:0,21,546	0/0:5,0:5:5.91:0,6,52	0/0:19,0:19:51.18:0,51,1335	0/0:22,0:22:60.16:0,60,1476	0/0:8,0:7:6.02:0,6,155	1/1:9,1:10:14.37:116,14,0	0/0:43,0:43:99:0,126,3171	0/0:35,0:34:93.24:0,93,2233	1/1:11,0:11:28.79:210,29,0	0/0:16,0:16:3.01:0,3,39	0/1:38,4:40:31.75:43,0,32	0/1:14,0:14:5.70:43,0,6	0/0:14,0:14:2.70:0,3,20	0/1:30,3:33:5.70:87,0,6	0/0:21,0:21:54.18:0,54,1322	0/1:23,1:24:71.48:287,0,71	1/1:17,0:17:20.65:165,21,0	1/1:4,0:4:8.80:67,9,0
chr10	101095950	.	TGC	T	1091.92	PASS	AB=0.977;AC=16;AF=0.286;AN=56;BaseQRankSum=12.159;DP=586;FS=4.303;HRun=0;HaplotypeScore=142.1806;InbreedingCoeff=0.3148;MQ=55.25;MQ0=8;MQRankSum=-6.975;QD=4.73;ReadPosRankSum=-1.219;VQSLOD=2.7103;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:13.01:60,0,13	0/1:14,0:14:44.72:45,0,45	0/0:33,0:14:19.33:0,19,377	0/0:38,0:16:43.12:0,43,535	0/0:23,0:23:69.22:0,69,1274	0/0:21,0:21:49.41:0,49,920	0/0:30,0:30:78.10:0,78,1356	1/1:23,0:23:6.72:274,7,0	0/1:16,1:17:2.78:61,0,3	0/0:21,0:21:59.21:0,59,890	0/0:7,0:7:21.07:0,21,404	0/0:5,0:5:5.96:0,6,49	0/0:19,0:19:51.17:0,51,979	0/0:22,0:22:60.16:0,60,1113	0/0:8,0:7:6.02:0,6,113	1/1:10,0:10:8.02:72,8,0	0/0:43,0:43:99:0,126,2386	0/0:33,0:32:93.21:0,93,1691	1/1:11,0:11:28.90:192,29,0	0/0:16,0:16:2.97:0,3,20	0/1:41,1:40:45.03:97,0,45	0/1:14,0:14:19.95:29,0,20	0/0:14,0:14:2.72:0,3,20	0/1:29,2:31:3.16:110,0,3	0/0:21,0:21:54.18:0,54,1025	0/1:24,0:24:95.90:200,0,96	1/1:16,1:17:15.27:72,15,0	0/1:4,0:4:2.27:52,0,2
chr10	101096011	.	A	ATG	5374.77	PASS	AB=0.569;AC=28;AF=0.519;AN=54;BaseQRankSum=1.469;DP=618;FS=16.968;HRun=0;HaplotypeScore=95.3932;InbreedingCoeff=0.7753;MQ=47.38;MQ0=15;MQRankSum=-2.192;QD=18.04;ReadPosRankSum=0.949;VQSLOD=3.8775;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,15:21:21.05:327,21,0	1/1:3,11:14:15.01:217,15,0	0/0:44,0:11:18:0,18,203	0/0:44,0:13:13.44:0,13,159	0/0:17,0:17:48.15:0,48,617	0/0:19,0:19:46.33:0,46,548	0/0:31,0:31:75.23:0,75,948	1/1:17,3:20:36.03:479,36,0	1/1:3,11:13:6.02:101,6,0	0/0:24,0:24:57.15:0,57,715	0/0:7,0:7:21.07:0,21,270	0/1:2,12:14:17.58:282,0,18	0/0:12,0:12:30.10:0,30,386	0/0:25,0:25:66.21:0,66,848	1/1:1,0:6:5.98:60,6,0	1/1:2,8:10:9.03:152,9,0	0/0:33,0:33:84.15:0,84,1039	0/0:26,0:26:66.15:0,66,816	1/1:7,7:13:30.06:452,30,0	./.	1/1:40,41:80:48.09:741,48,0	1/1:4,8:12:21.07:345,21,0	1/1:3,6:9:15.04:227,15,0	1/1:10,32:40:54.15:907,54,0	0/0:26,0:26:63.19:0,63,795	0/1:8,16:24:52.61:833,0,53	1/1:5,3:8:3.01:50,3,0	1/1:3,5:8:12.04:202,12,0
chr10	101096038	.	C	CGT	4711.44	PASS	AB=0.639;AC=21;AF=0.375;AN=56;BaseQRankSum=0.843;DP=652;FS=12.516;HRun=0;HaplotypeScore=102.8432;InbreedingCoeff=0.8776;MQ=50.91;MQ0=14;MQRankSum=-2.590;QD=20.22;ReadPosRankSum=-5.601;VQSLOD=2.9524;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:9,9:18:17.95:293,18,0	1/1:5,11:16:24.07:371,24,0	0/0:49,0:11:15.52:0,16,188	0/0:66,0:24:25.54:0,26,279	0/0:15,0:15:36.12:0,36,458	0/0:19,0:19:48.15:0,48,610	0/0:33,0:33:72.23:0,72,916	1/1:4,14:18:45.08:694,45,0	1/1:8,9:16:11.85:176,12,0	0/0:19,0:19:28.16:0,28,552	0/0:7,0:7:21.07:0,21,267	0/0:21,0:21:42.10:0,42,506	0/0:13,0:12:30.10:0,30,382	0/0:25,0:26:66.04:0,66,815	0/0:8,0:7:9:0,9,114	1/1:4,9:13:18.06:296,18,0	0/0:22,0:22:54.15:0,54,668	0/0:23,0:23:51.10:0,51,615	1/1:6,3:9:12.02:196,12,0	1/1:0,9:9:6.02:100,6,0	1/1:30,59:91:14.55:1293,15,0	0/0:9,0:9:15.05:0,15,191	0/0:11,0:11:24.06:0,24,292	0/0:56,0:54:69.18:0,69,858	0/0:20,0:20:54.17:0,54,687	0/1:10,13:23:98.42:647,0,98	1/1:2,6:8:18.06:301,18,0	1/1:2,8:10:21.07:345,21,0
chr10	101096098	.	TGC	T	501.96	PASS	AB=0.978;AC=17;AF=0.304;AN=56;BaseQRankSum=6.936;DP=697;FS=0.467;HRun=0;HaplotypeScore=119.9921;InbreedingCoeff=-0.3162;MQ=45.20;MQ0=54;MQRankSum=1.649;QD=1.24;ReadPosRankSum=1.736;VQSLOD=2.2444;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:41:47.37:0,47,1131	0/1:11,0:10:24.05:24,0,55	0/1:17,0:5:14.01:14,0,27	0/0:20,0:1:2.99:0,3,24	0/0:13,0:12:21.02:0,21,284	0/0:20,1:19:50.59:0,51,774	0/0:31,0:29:59.95:0,60,857	0/1:16,0:11:23.37:23,0,65	0/1:22,1:19:45.86:50,0,46	0/0:32,0:28:44.72:0,45,1069	0/0:6,0:4:6.02:0,6,114	0/1:26,1:25:34.97:71,0,35	0/0:17,0:15:28.31:0,28,474	0/0:22,0:19:33.76:0,34,643	1/1:6,1:6:2.99:24,3,0	0/1:15,1:14:31.02:31,0,71	0/0:32,0:32:53.99:0,54,1085	0/0:37,0:35:85.38:0,85,1247	0/1:19,0:18:29.14:29,0,82	0/1:13,1:12:2.51:3,0,49	0/1:122,0:109:99:158,0,262	0/0:16,1:15:4.25:0,4,22	0/1:15,0:14:15.51:16,0,44	0/1:51,0:44:38.08:80,0,38	0/1:24,0:22:6.03:6,0,561	0/1:22,1:18:22.64:23,0,103	0/1:9,1:10:43.25:43,0,80	0/1:11,0:10:52.25:63,0,52
chr10	101096100	.	CGT	C	2454.96	PASS	AB=0.897;AC=25;AF=0.481;AN=52;BaseQRankSum=5.337;DP=686;FS=6.438;HRun=0;HaplotypeScore=112.1932;InbreedingCoeff=0.4100;MQ=45.57;MQ0=54;MQRankSum=1.407;QD=5.85;ReadPosRankSum=1.946;VQSLOD=2.8630;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:43:62.39:0,62,960	1/1:10,0:10:3.70:98,4,0	./.	./.	0/0:11,0:10:13.59:0,14,186	0/0:21,0:19:47.29:0,47,630	0/0:31,0:29:46.38:0,46,696	1/1:12,3:10:11.83:121,12,0	1/1:19,4:19:29.12:260,29,0	0/1:29,4:29:9.08:9,0,730	0/0:7,0:5:6.02:0,6,87	1/1:24,0:23:27.56:261,28,0	0/0:17,1:16:30.54:0,31,379	0/0:22,0:19:8.46:0,8,536	0/0:7,0:6:0.47:0,0,1	1/1:14,1:14:22.01:204,22,0	0/0:29,4:32:23.29:0,23,870	0/0:38,0:36:77.96:0,78,1045	0/1:14,2:16:19.23:104,0,19	1/1:13,0:11:16.28:98,16,0	1/1:108,11:106:23.91:620,24,0	1/1:18,0:16:10.80:77,11,0	0/1:15,1:15:55.10:55,0,81	1/1:49,1:43:24.38:253,24,0	0/1:22,1:21:1.89:2,0,428	0/1:18,4:17:51.73:164,0,52	0/1:8,1:9:50.16:128,0,50	0/1:9,2:10:25.03:185,0,25
chr10	101096114	.	T	TGC	2427.88	PASS	AB=0.962;AC=19;AF=0.365;AN=52;BaseQRankSum=6.599;DP=647;FS=5.892;HRun=0;HaplotypeScore=128.4035;InbreedingCoeff=0.0987;MQ=46.17;MQ0=44;MQRankSum=-0.504;QD=5.97;ReadPosRankSum=-0.464;VQSLOD=2.9773;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:47,0:44:2.61:3,0,663	1/1:10,1:10:3.17:131,3,0	./.	./.	0/0:10,0:8:15.04:0,15,210	0/0:22,0:20:54.14:0,54,761	0/0:30,0:28:60.69:0,61,826	1/1:15,0:11:0.07:96,0,0	0/1:21,2:19:0.12:200,0,0	0/0:33,0:30:55.82:0,56,950	0/0:8,0:6:9.02:0,9,116	0/1:25,0:24:23.94:130,0,24	0/0:17,0:15:32.10:0,32,406	0/0:20,0:18:33.96:0,34,562	0/0:7,0:8:5.99:0,6,50	0/1:16,0:13:22.26:115,0,22	0/0:33,0:32:72.08:0,72,977	0/0:36,0:34:81.18:0,81,1114	0/1:17,2:18:51.17:148,0,51	1/1:11,4:13:19.59:269,20,0	0/1:101,7:95:99:599,0,128	1/1:20,0:18:11.97:144,12,0	0/1:15,0:14:9.91:10,0,71	0/1:42,0:43:62.40:143,0,62	0/0:21,0:19:38.42:0,38,514	0/1:23,3:21:66.16:396,0,66	0/1:9,0:9:2.41:56,0,2	0/1:10,1:10:11.44:149,0,11
chr10	101096115	.	G	GCA	742.36	PASS	AB=0.996;AC=13;AF=0.250;AN=52;BaseQRankSum=5.141;DP=646;FS=0.000;HRun=0;HaplotypeScore=135.3903;InbreedingCoeff=-0.1341;MQ=46.13;MQ0=45;MQRankSum=0.403;QD=2.20;ReadPosRankSum=1.796;VQSLOD=2.2897;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:44:60.79:0,61,1006	0/1:11,0:10:28.20:28,0,32	./.	./.	0/0:10,0:8:15.05:0,15,242	0/0:22,0:20:54.17:0,54,850	0/0:30,0:28:65.69:0,66,978	0/1:14,0:10:4.99:5,0,55	0/1:24,0:20:68.95:69,0,98	0/0:32,0:29:78.70:0,79,1182	0/0:8,0:6:9.03:0,9,144	0/1:25,0:24:26.26:26,0,120	0/0:16,0:14:33.06:0,33,489	0/0:20,0:18:47.19:0,47,698	0/0:10,0:8:6.02:0,6,90	0/1:16,0:13:21.65:22,0,91	0/0:32,0:31:72.20:0,72,1126	0/0:36,0:34:84.24:0,84,1317	0/1:19,0:17:57.43:57,0,140	0/1:16,0:14:3.98:149,0,4	0/1:103,5:95:99:178,0,494	1/1:20,0:18:4.26:88,4,0	0/0:15,0:14:18.51:0,19,210	0/1:47,0:43:33.38:33,0,168	0/0:21,0:19:42.07:0,42,604	0/1:27,0:21:99:191,0,145	0/0:9,0:9:10.84:0,11,70	0/1:11,0:10:42.60:43,0,61
chr10	101096116	.	TGC	T	1324.12	PASS	AB=0.998;AC=27;AF=0.519;AN=52;BaseQRankSum=9.638;DP=644;FS=4.515;HRun=0;HaplotypeScore=127.9815;InbreedingCoeff=0.1741;MQ=46.13;MQ0=44;MQRankSum=-0.675;QD=2.96;ReadPosRankSum=-5.434;VQSLOD=0.3356;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:47,0:44:37.07:37,0,690	0/1:11,0:10:1.11:79,0,1	./.	./.	0/1:11,0:9:7.40:7,0,139	0/0:21,0:19:18.88:0,19,468	0/0:31,0:29:4.43:0,4,599	1/1:15,0:11:11.64:138,12,0	1/1:24,0:20:0.41:85,0,0	0/0:32,0:30:29.77:0,30,741	0/0:9,0:7:11.95:0,12,92	1/1:25,0:24:28.97:161,29,0	0/0:16,0:14:6.08:0,6,275	0/0:20,0:18:31.23:0,31,383	1/1:10,0:8:5.99:49,6,0	1/1:15,1:13:6.83:63,7,0	0/0:32,0:31:51.04:0,51,1032	0/0:36,0:34:59.56:0,60,874	0/1:19,0:17:19.41:74,0,19	1/1:16,0:14:13.80:74,14,0	0/1:103,2:92:18.30:303,0,18	1/1:18,1:17:1.68:22,2,0	1/1:15,0:14:0.37:38,0,0	1/1:46,0:42:24.55:155,25,0	0/1:20,0:18:17.11:17,0,455	0/1:27,0:21:72.18:97,0,72	0/1:10,0:10:25.64:34,0,26	0/1:11,0:10:27.47:59,0,27
chr10	101096150	.	C	CGT	1267.16	PASS	AB=0.950;AC=12;AF=0.214;AN=56;BaseQRankSum=0.771;DP=528;FS=11.014;HRun=0;HaplotypeScore=108.5817;InbreedingCoeff=0.6829;MQ=58.42;MQ0=6;MQRankSum=0.929;QD=8.07;ReadPosRankSum=0.432;VQSLOD=2.7350;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:53,0:52:97.47:97,0,156	0/0:7,0:7:14.01:0,14,151	1/1:3,0:3:1.25:3,1,0	0/0:10,0:7:2.64:0,3,29	0/0:8,0:8:20.90:0,21,182	0/0:16,0:16:42.07:0,42,541	0/0:25,0:24:60.19:0,60,859	0/0:18,0:17:44.25:0,44,408	0/0:13,0:12:26.14:0,26,215	0/0:23,0:23:62.95:0,63,753	0/0:10,0:10:24.06:0,24,329	1/1:22,0:21:29.69:356,30,0	0/0:17,0:17:41.98:0,42,489	0/0:14,0:13:36.06:0,36,474	1/1:11,0:10:0.27:1,0,0	0/0:13,0:12:17.87:0,18,212	0/0:32,0:31:83.87:0,84,1152	0/0:32,0:31:70.56:0,71,889	0/0:11,0:11:25.16:0,25,213	0/0:13,0:13:19.97:0,20,169	0/0:56,0:52:92.56:0,93,944	0/1:16,2:17:1.94:176,0,2	1/1:15,4:19:27.98:438,28,0	1/1:19,12:31:22.47:349,22,0	0/0:16,0:16:41.97:0,42,522	0/0:23,0:23:58.48:0,58,547	0/0:11,0:11:23.16:0,23,216	0/0:3,0:3:8.76:0,9,57
chr10	101096266	.	C	CTT	635.35	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.746;DP=558;FS=1.103;HRun=2;HaplotypeScore=68.4304;InbreedingCoeff=0.9915;MQ=71.97;MQ0=0;MQRankSum=-3.081;QD=37.37;ReadPosRankSum=2.938;VQSLOD=3.9076;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.24:0,87,1217	0/0:8,0:8:24.08:0,24,353	0/0:15,0:15:45.03:0,45,586	0/0:20,0:20:57.18:0,57,808	0/0:23,0:23:60.20:0,60,879	0/0:17,0:17:45.15:0,45,663	0/0:21,0:21:63.16:0,63,862	0/0:37,0:37:99:0,99,1405	0/0:19,0:19:57.19:0,57,839	0/0:20,0:20:54.18:0,54,795	0/0:7,0:7:21.07:0,21,309	0/0:24,0:24:63.21:0,63,926	0/0:17,0:17:45.11:0,45,620	0/0:16,0:16:42.14:0,42,616	1/1:0,15:17:39.13:730,39,0	0/0:15,0:15:45.15:0,45,656	0/0:27,0:27:78.26:0,78,1149	0/0:23,0:23:63.18:0,63,903	0/0:19,0:19:51.15:0,51,716	0/0:17,0:17:48.16:0,48,704	0/0:28,0:28:81.26:0,81,1171	0/0:15,0:15:42.14:0,42,616	0/0:11,0:11:24.08:0,24,353	0/0:28,0:28:78.21:0,78,1105	0/0:26,0:26:72.22:0,72,1021	0/0:26,0:26:69.23:0,69,1016	0/0:19,0:18:54.18:0,54,795	0/0:11,0:11:33.11:0,33,479
chr10	101098214	.	G	GAA	2128.73	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-0.234;DP=601;FS=17.625;HRun=9;HaplotypeScore=79.8781;InbreedingCoeff=0.9977;MQ=75.62;MQ0=0;MQRankSum=0.072;QD=19.53;ReadPosRankSum=-0.228;VQSLOD=0.7546;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:16:29.94:103,30,0	0/0:8,0:8:24.05:0,24,248	0/0:23,0:21:19.65:0,20,221	0/0:18,0:17:26.45:0,26,291	0/0:37,0:39:96.15:0,96,1077	0/0:34,0:34:99:0,99,1053	0/0:16,0:16:39.06:0,39,406	0/0:27,0:27:57.08:0,57,599	0/0:21,0:21:51.09:0,51,535	0/0:31,0:31:78.15:0,78,819	0/0:19,0:19:45.08:0,45,471	1/1:0,11:14:30.09:427,30,0	0/0:15,0:15:33.06:0,33,351	0/0:24,0:24:69.17:0,69,734	1/1:4,0:20:34.93:120,35,0	0/0:18,0:18:42.09:0,42,439	0/0:18,0:18:45.09:0,45,479	0/0:20,0:20:50.48:0,50,518	0/0:17,0:17:42.06:0,42,434	0/0:32,0:32:80.91:0,81,840	0/0:10,0:10:30.08:0,30,319	1/1:4,13:20:42.05:576,42,0	1/1:2,15:18:36.12:537,36,0	1/1:3,17:21:36.12:554,36,0	0/0:25,0:25:72.17:0,72,759	0/0:27,0:27:72.18:0,72,766	0/0:36,0:36:99:0,99,1045	0/0:13,0:13:39.10:0,39,415
chr10	101098436	.	C	CTATA	1822.49	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.974;DP=658;FS=0.791;HRun=0;HaplotypeScore=110.2391;InbreedingCoeff=0.9976;MQ=88.63;MQ0=0;MQRankSum=-4.715;QD=60.75;ReadPosRankSum=0.642;VQSLOD=5.4397;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:30:72.25:1917,72,0	0/0:8,0:8:24.06:0,24,414	0/0:23,0:23:60.20:0,60,1088	0/0:25,0:25:57.19:0,57,1039	0/0:34,0:34:84.29:0,84,1560	0/0:37,0:37:99:0,105,1915	0/0:21,0:21:60.21:0,60,1120	0/0:23,0:23:54.18:0,54,976	0/0:23,0:23:66.21:0,66,1201	0/0:23,0:23:66.22:0,66,1203	0/0:23,0:23:63.22:0,63,1165	0/0:27,0:27:69.24:0,69,1276	0/0:19,0:19:45.15:0,45,831	0/0:24,0:24:63.18:0,63,1113	0/0:24,0:24:63.22:0,63,1176	0/0:24,0:24:69.24:0,69,1288	0/0:26,0:26:72.25:0,72,1343	0/0:11,0:11:33.11:0,33,616	0/0:14,0:14:42.12:0,42,720	0/0:40,0:40:99:0,102,1834	0/0:18,0:18:51.17:0,51,941	0/0:20,0:20:48.16:0,48,894	0/0:24,0:24:63.22:0,63,1164	0/0:21,0:21:63.20:0,63,1145	0/0:27,0:27:75.26:0,75,1393	0/0:26,0:26:72.25:0,72,1344	0/0:30,0:30:87.28:0,87,1581	0/0:13,0:13:39.13:0,39,728
chr10	101104290	.	AAC	A	665.98	PASS	AB=0.920;AC=24;AF=0.462;AN=52;BaseQRankSum=7.231;DP=532;FS=2.870;HRun=0;HaplotypeScore=108.9757;InbreedingCoeff=0.1501;MQ=65.22;MQ0=9;MQRankSum=-3.550;QD=2.13;ReadPosRankSum=0.495;VQSLOD=2.0101;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,14:24:21.06:236,21,0	1/1:17,0:16:9.49:39,9,0	./.	0/0:27,0:19:3.01:0,3,41	0/0:12,0:10:3.01:0,3,45	0/1:13,2:14:15.73:16,0,207	0/1:21,5:26:71.25:71,0,274	0/0:25,0:23:6.92:0,7,38	1/1:15,0:15:3.10:18,3,0	0/0:18,1:19:1.69:0,2,409	0/0:8,0:8:5.42:0,5,189	1/1:21,1:22:17:99,17,0	0/0:19,0:19:23.49:0,23,444	0/0:18,0:19:36.11:0,36,520	1/1:25,0:25:8.51:42,9,0	1/1:9,0:9:2.50:12,2,0	0/0:24,1:26:6.98:0,7,637	0/1:28,4:32:62.99:63,0,722	0/0:15,0:15:7.48:0,7,33	0/1:16,0:16:19.60:22,0,20	./.	0/1:21,0:21:10.26:10,0,49	0/1:11,2:13:47.06:47,0,47	1/1:25,0:25:5.92:43,6,0	0/1:19,3:22:44.18:44,0,619	0/1:25,0:23:21.15:21,0,63	0/0:10,0:9:7.32:0,7,48	1/1:6,0:6:10.56:49,11,0
chr10	101104311	.	ACACACACACACACGCACACG	A	490.60	PASS	AB=0.971;AC=6;AF=0.107;AN=56;BaseQRankSum=4.033;DP=548;FS=0.000;HRun=0;HaplotypeScore=267.3555;InbreedingCoeff=0.2362;MQ=48.99;MQ0=15;MQRankSum=-0.649;QD=4.67;ReadPosRankSum=0.442;VQSLOD=2.2982;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:27.32:0,27,1449	0/0:21,0:20:36:0,36,665	0/0:9,0:4:5.96:0,6,52	0/0:13,0:8:15.02:0,15,180	0/0:9,0:7:12.01:0,12,414	0/0:17,0:14:19.88:0,20,1585	0/0:24,0:22:27.28:0,27,946	0/0:22,0:18:50.73:0,51,425	0/0:22,0:20:11.44:0,11,267	0/0:17,0:17:39.09:0,39,1709	0/0:10,0:10:27.09:0,27,1883	0/1:23,0:23:41.14:41,0,83	0/0:23,0:23:56.98:0,57,3411	0/0:23,0:23:63.19:0,63,3298	1/1:4,20:24:9.03:452,9,0	0/0:9,0:9:18:0,18,105	0/0:36,0:34:89.98:0,90,4143	0/0:29,0:29:70.97:0,71,3520	0/0:17,0:17:29.30:0,29,459	0/0:18,0:18:20.47:0,20,400	0/0:15,0:11:0.37:0,0,1	0/0:18,0:17:14.82:0,15,216	0/1:10,0:11:65.44:65,0,139	0/1:30,0:31:14.47:44,0,14	0/0:25,0:25:65.91:0,66,3308	0/0:25,0:22:28.04:0,28,662	0/1:16,0:15:10.96:11,0,338	0/0:6,0:6:17.27:0,17,420
chr10	101104313	.	ACACACACACACG	A	1277.32	PASS	AB=0.892;AC=12;AF=0.214;AN=56;BaseQRankSum=5.044;DP=551;FS=0.706;HRun=0;HaplotypeScore=203.7759;InbreedingCoeff=0.6032;MQ=48.99;MQ0=14;MQRankSum=-4.651;QD=7.93;ReadPosRankSum=0.839;VQSLOD=2.5817;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:60.53:0,61,688	0/0:21,0:20:13.67:0,14,369	0/0:7,0:3:2.94:0,3,18	0/0:11,0:6:12.01:0,12,109	0/0:8,0:6:12.01:0,12,213	0/0:17,0:14:29.77:0,30,753	0/0:25,0:23:39.06:0,39,454	0/0:22,0:18:44.70:0,45,335	0/1:22,0:20:19.96:20,0,121	0/0:17,0:17:41.45:0,41,951	0/0:10,0:10:27.07:0,27,1082	1/1:5,20:25:16.94:568,17,0	0/0:23,0:23:40.12:0,40,1781	0/0:23,0:23:63.07:0,63,1621	1/1:24,0:24:7.94:223,8,0	0/0:9,0:9:18.19:0,18,116	0/0:36,0:35:89.68:0,90,2062	0/0:31,0:31:86.44:0,86,1890	0/0:16,0:16:4.33:0,4,171	0/0:19,0:19:20.43:0,20,245	0/1:17,0:13:0.08:0,0,0	1/1:3,14:16:11.87:248,12,0	1/1:10,1:11:6.79:267,7,0	0/1:6,22:29:0.72:100,0,1	0/0:26,0:26:74.76:0,75,1669	0/0:25,0:22:13.70:0,14,347	0/1:16,0:15:5.78:6,0,177	0/0:6,0:6:17.90:0,18,234
chr10	101104328	.	CA	C	1367.05	PASS	AB=0.921;AC=17;AF=0.304;AN=56;BaseQRankSum=11.783;DP=518;FS=18.406;HRun=1;HaplotypeScore=127.1139;InbreedingCoeff=0.4864;MQ=49.07;MQ0=15;MQRankSum=-11.849;QD=7.59;ReadPosRankSum=-1.615;VQSLOD=-0.5874;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:69.23:0,69,1054	1/1:12,6:17:27.68:222,28,0	0/0:5,0:1:0.47:0,0,1	0/0:4,0:3:5.99:0,6,91	0/0:8,0:6:12.04:0,12,192	0/0:17,0:14:33.11:0,33,526	0/0:26,0:24:45.61:0,46,670	1/1:8,6:10:22.59:234,23,0	1/1:18,3:19:20.47:178,20,0	0/0:18,0:17:48.15:0,48,714	0/0:14,0:14:39.13:0,39,613	0/0:27,0:27:2.23:0,2,63	0/0:20,0:20:57.19:0,57,899	0/0:23,0:23:60.20:0,60,959	0/1:24,0:24:5.42:5,0,13	1/1:5,4:8:8.97:85,9,0	0/0:39,0:37:99:0,102,1575	0/0:27,0:27:81.16:0,81,1176	0/1:10,1:10:42.84:107,0,43	0/1:16,1:17:14.73:77,0,15	1/1:18,0:13:2.75:23,3,0	0/0:15,0:14:6.40:0,6,97	0/0:9,0:9:12.94:0,13,214	0/0:29,0:29:10.93:0,11,132	0/0:25,0:25:75.25:0,75,1180	0/1:17,6:21:34.49:289,0,34	0/1:16,1:16:8.44:94,0,8	1/1:5,2:7:21.01:233,21,0
chr10	101104330	.	CG	C	1715.21	PASS	AB=0.748;AC=18;AF=0.321;AN=56;BaseQRankSum=10.845;DP=504;FS=20.641;HRun=1;HaplotypeScore=123.0708;InbreedingCoeff=0.5882;MQ=49.27;MQ0=14;MQRankSum=-10.766;QD=10.27;ReadPosRankSum=-2.127;VQSLOD=-0.0153;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:72.22:0,72,1088	1/1:9,8:16:24.12:262,24,0	0/0:6,1:2:3.48:0,3,49	0/0:5,0:4:5.99:0,6,80	0/0:8,0:6:12.04:0,12,192	0/0:17,0:14:33.11:0,33,523	0/0:24,0:22:42.58:0,43,623	1/1:11,1:9:19.08:147,19,0	1/1:9,12:19:23.98:259,24,0	0/0:16,0:15:45.15:0,45,715	0/0:14,0:14:39.13:0,39,620	0/0:27,0:27:12.94:0,13,113	0/0:20,0:20:57.14:0,57,874	0/0:22,0:22:60.20:0,60,955	0/1:24,0:24:5.47:5,0,13	1/1:6,2:7:6.49:79,6,0	0/0:39,0:37:99:0,101,1560	0/0:27,0:27:78.26:0,78,1219	0/1:5,5:9:49.78:208,0,50	0/1:5,12:17:13.10:125,0,13	1/1:11,6:12:2.97:42,3,0	0/0:15,0:14:10.32:0,10,112	0/0:10,0:10:18.90:0,19,244	0/0:29,0:29:14.01:0,14,162	0/0:25,0:25:72.24:0,72,1133	0/1:13,7:17:41.47:388,0,41	1/1:3,11:13:15:189,15,0	1/1:2,5:7:20.98:201,21,0
chr10	101104337	.	GCA	G	955.50	PASS	AB=0.952;AC=20;AF=0.357;AN=56;BaseQRankSum=11.813;DP=507;FS=6.127;HRun=0;HaplotypeScore=134.0047;InbreedingCoeff=0.7688;MQ=49.98;MQ0=14;MQRankSum=-11.692;QD=6.01;ReadPosRankSum=0.807;VQSLOD=2.4802;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:72.22:0,72,1208	1/1:16,0:15:20.94:179,21,0	0/0:10,0:4:12.04:0,12,214	0/0:8,0:7:15.05:0,15,231	0/0:10,0:8:18.04:0,18,287	0/0:18,0:15:39.13:0,39,667	0/0:23,0:21:39.11:0,39,644	1/1:9,1:7:8.63:63,9,0	1/1:18,0:16:23.60:175,24,0	0/0:18,0:17:48.16:0,48,848	0/0:18,0:18:51.17:0,51,907	0/1:28,0:28:2.64:3,0,122	0/0:21,0:21:57.19:0,57,990	0/0:22,0:22:60.17:0,60,1014	0/0:25,0:25:5.53:0,6,76	1/1:6,0:5:5.59:42,6,0	0/0:40,0:38:99:0,109,1873	0/0:25,0:25:66.22:0,66,1164	1/1:11,1:9:11.57:105,12,0	1/1:14,0:14:12.37:93,12,0	1/1:15,0:11:2.98:22,3,0	0/0:15,0:14:11.77:0,12,199	0/0:9,0:9:18.39:0,18,265	0/0:30,0:30:14.55:0,15,202	0/0:24,0:24:69.22:0,69,1199	0/1:17,2:17:22.45:181,0,22	1/1:12,1:13:19.01:162,19,0	1/1:7,0:7:15.33:130,15,0
chr10	101104470	.	CAGG	C	9150.78	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.438;DP=564;FS=10.092;HRun=0;HaplotypeScore=113.2358;InbreedingCoeff=0.9984;MQ=88.37;MQ0=0;MQRankSum=-8.575;QD=44.64;ReadPosRankSum=3.585;VQSLOD=6.3351;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,39:42:96.33:1632,96,0	1/1:1,7:8:18.06:307,18,0	0/0:33,0:33:99:0,99,2140	0/0:18,0:18:51.17:0,51,1103	0/0:15,0:15:45.15:0,45,1009	0/0:20,0:20:54.18:0,54,1188	0/0:15,0:15:39.13:0,39,878	1/1:2,16:18:51.12:812,51,0	1/1:1,15:16:45.15:766,45,0	0/0:27,0:27:81.27:0,81,1798	0/0:10,0:10:30.10:0,30,691	0/0:20,0:20:60.21:0,60,1382	0/0:23,0:23:66.23:0,66,1522	0/0:26,0:26:78.27:0,78,1745	0/0:22,0:22:66.23:0,66,1522	1/1:0,17:17:48.16:818,48,0	0/0:23,0:23:69.23:0,69,1521	0/0:11,0:11:30.08:0,30,643	1/1:1,10:11:30.09:484,30,0	1/1:0,12:12:27.09:460,27,0	1/1:4,13:17:36.12:611,36,0	0/0:21,0:21:60.21:0,60,1382	0/0:22,0:22:66.23:0,66,1517	0/0:26,0:26:72.25:0,72,1652	0/0:27,0:27:81.28:0,81,1852	1/1:0,17:17:51.17:856,51,0	1/1:0,23:23:69.24:1176,69,0	1/1:0,24:24:72.25:1228,72,0
chr10	101105141	.	GT	G	281.89	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.852;DP=591;FS=0.000;HRun=8;HaplotypeScore=61.2243;InbreedingCoeff=0.9020;MQ=71.25;MQ0=0;MQRankSum=-0.687;QD=15.66;ReadPosRankSum=0.753;VQSLOD=3.4440;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:39.06:377,39,0	0/0:2,0:2:6.02:0,6,72	0/0:25,0:21:30.33:0,30,483	0/0:19,0:16:24.28:0,24,356	0/0:25,0:25:69.19:0,69,812	0/0:18,1:20:28.05:0,28,591	0/0:14,0:14:36.11:0,36,435	0/0:42,0:42:99:0,120,1439	0/0:21,0:21:63.16:0,63,735	0/0:27,0:27:78.22:0,78,924	0/0:31,0:31:90.25:0,90,1064	0/0:15,0:15:45.14:0,45,538	0/0:18,0:18:45.11:0,45,511	0/0:19,0:19:45.14:0,45,539	0/0:19,0:19:48.15:0,48,580	0/0:26,0:26:72.21:0,72,858	0/0:24,0:24:57.12:0,57,650	0/0:18,0:18:51.14:0,51,604	0/0:11,0:11:33.09:0,33,388	0/0:18,0:18:48.14:0,48,570	0/0:13,0:13:33.10:0,33,399	0/0:22,0:22:54.15:0,54,642	0/0:19,0:19:54.17:0,54,652	0/0:17,0:17:45.14:0,45,543	0/0:28,0:28:75.23:0,75,906	0/0:30,0:30:75.18:0,75,856	0/0:26,0:26:72.18:0,72,835	0/0:24,0:24:60.18:0,60,725
chr10	101105551	.	A	AACACACACACAC	7374.93	PASS	AB=0.725;AC=23;AF=0.411;AN=56;BaseQRankSum=4.737;DP=595;FS=5.221;HRun=0;HaplotypeScore=196.4622;InbreedingCoeff=0.7885;MQ=53.08;MQ0=14;MQRankSum=-8.710;QD=30.60;ReadPosRankSum=-1.688;VQSLOD=3.9180;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:28.85:0,29,619	1/1:12,0:12:24.06:527,24,0	0/0:44,0:20:1.03:0,1,692	0/0:51,0:27:25.37:0,25,489	0/0:31,0:31:52.53:0,53,1787	0/0:28,0:28:60.59:0,61,1613	0/0:21,0:20:51.16:0,51,1707	1/1:40,0:34:75.16:1877,75,0	1/1:3,17:21:2.96:19,3,0	0/0:28,0:27:75.65:0,76,2259	0/0:21,0:21:36.11:0,36,1159	0/0:8,0:8:7.36:0,7,36	0/0:15,0:15:33.10:0,33,1073	0/0:13,0:13:24.06:0,24,644	1/1:22,0:23:27.09:586,27,0	0/1:5,0:24:0.09:0,0,0	0/0:20,0:20:43.91:0,44,1230	0/0:14,0:14:23.61:0,24,745	1/1:16,0:16:9.61:926,10,0	1/1:23,0:23:8.95:179,9,0	0/1:7,9:18:0:0,0,0	0/0:8,0:8:1.34:0,1,4	0/1:7,0:7:0:0,0,0	1/1:10,0:9:1.54:6,2,0	0/0:17,0:17:33.08:0,33,1013	1/1:16,0:17:45.14:1519,45,0	1/1:16,0:17:30.06:960,30,0	1/1:11,0:11:21.54:775,22,0
chr10	101105559	.	CAGAGAGAGAGAGAG	C	424.43	PASS	AB=0.799;AC=5;AF=0.096;AN=52;BaseQRankSum=3.129;DP=588;FS=29.726;HRun=0;HaplotypeScore=195.7166;InbreedingCoeff=0.5314;MQ=49.82;MQ0=17;MQRankSum=-3.381;QD=5.51;ReadPosRankSum=-1.647;VQSLOD=1.2731;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,14:35:18.45:513,18,0	0/0:14,0:14:14.64:0,15,326	./.	./.	0/0:31,0:32:30:0,30,1012	0/0:27,0:27:36.12:0,36,1432	0/0:22,0:20:18.06:0,18,522	0/0:39,0:33:14.52:0,15,264	0/0:20,0:20:3.01:0,3,108	0/0:29,0:28:45.15:0,45,1798	0/0:18,0:18:6.02:0,6,231	0/0:8,0:12:8.05:0,8,188	0/0:15,0:15:24.08:0,24,1228	0/0:9,0:11:18.03:0,18,621	0/0:25,0:25:2.79:0,3,30	0/0:22,0:21:0.47:0,0,1	0/0:19,0:18:30.73:0,31,1229	0/0:11,0:16:16.30:0,16,644	0/0:14,0:14:12.04:0,12,402	0/1:19,0:19:0:0,0,0	0/0:21,0:21:0:0,0,0	0/0:10,0:10:3.01:0,3,63	0/1:4,0:11:0:0,0,0	0/1:8,0:10:0.12:0,0,0	0/0:17,0:17:14.12:0,14,482	0/0:20,0:20:31.29:0,31,851	0/0:18,0:17:18.01:0,18,500	0/0:12,0:12:12.40:0,12,235
chr10	101105614	.	TGAAGA	T	6332.53	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=10.716;DP=677;FS=0.415;HRun=0;HaplotypeScore=138.7236;InbreedingCoeff=0.9967;MQ=68.22;MQ0=38;MQRankSum=-5.786;QD=35.98;ReadPosRankSum=-1.445;VQSLOD=4.5817;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:63.05:0,63,1533	1/1:9,2:11:21.04:365,21,0	0/0:104,0:36:46.98:0,47,1229	0/0:103,0:30:50.51:0,51,1066	0/0:26,0:25:69.19:0,69,1904	0/0:21,0:21:45.15:0,45,1293	0/0:18,0:17:36.97:0,37,957	1/1:14,9:22:51.09:762,51,0	1/1:14,2:15:39.12:659,39,0	0/0:27,0:26:66.23:0,66,1807	0/0:16,0:16:39.13:0,39,1137	0/0:18,0:18:36.12:0,36,1038	0/0:17,0:17:45.15:0,45,1285	0/0:16,0:16:42.14:0,42,1215	1/1:16,2:18:48.12:792,48,0	1/1:15,3:18:38.40:647,38,0	0/0:18,0:18:46.04:0,46,1283	0/0:8,0:8:18.06:0,18,516	1/1:12,2:14:30.03:471,30,0	1/1:12,10:22:45.11:742,45,0	1/1:14,0:14:20.68:250,21,0	0/0:10,0:9:21.07:0,21,552	0/0:27,0:26:50.65:0,51,1352	0/0:17,0:17:36.12:0,36,981	0/0:23,0:23:51.65:0,52,1446	1/1:13,4:17:36.01:530,36,0	1/1:10,3:13:36.10:627,36,0	1/1:9,1:9:27.08:486,27,0
chr10	101105619	.	A	AT	5080.45	PASS	AB=0.672;AC=18;AF=0.321;AN=56;BaseQRankSum=7.494;DP=723;FS=2.809;HRun=0;HaplotypeScore=117.3474;InbreedingCoeff=0.6721;MQ=71.93;MQ0=35;MQRankSum=-4.101;QD=26.46;ReadPosRankSum=-1.030;VQSLOD=4.7117;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:72.67:0,73,950	1/1:5,5:10:21.03:257,21,0	0/0:115,0:45:96.07:0,96,1252	0/0:114,0:34:60.90:0,61,898	0/0:27,0:27:75.25:0,75,1048	0/0:21,0:21:54.18:0,54,755	0/0:18,0:17:40.33:0,40,527	0/1:13,10:22:61.04:541,0,61	1/1:4,12:15:38.11:472,38,0	0/0:28,0:28:78.69:0,79,1056	0/0:17,0:17:42.14:0,42,587	0/0:20,0:20:42.14:0,42,587	0/0:17,0:17:51.17:0,51,710	0/0:16,0:16:45.15:0,45,626	1/1:7,15:22:51.14:676,51,0	1/1:9,11:20:19.20:522,19,0	0/0:18,0:18:50.53:0,51,679	0/0:10,0:10:27.06:0,27,352	0/1:6,9:15:44.14:364,0,44	0/1:13,11:24:16.12:620,0,16	1/1:5,9:14:27:359,27,0	0/0:11,0:10:24.08:0,24,336	0/0:27,0:26:53.65:0,54,718	0/0:17,0:17:36.12:0,36,502	0/0:23,0:23:54.17:0,54,755	0/1:9,8:17:99:414,0,108	1/1:3,17:20:44.23:541,44,0	1/1:3,8:11:26.98:314,27,0
chr10	101105808	.	TACAC	T	7261.36	PASS	AB=0.584;AC=23;AF=0.411;AN=56;BaseQRankSum=8.258;DP=753;FS=1.126;HRun=0;HaplotypeScore=180.6876;InbreedingCoeff=0.7239;MQ=58.15;MQ0=5;MQRankSum=-7.447;QD=21.61;ReadPosRankSum=-2.181;VQSLOD=4.3917;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:41:74.40:0,74,1572	1/1:2,6:8:15.05:246,15,0	0/0:25,0:8:9.02:0,9,118	0/0:17,0:6:2.97:0,3,20	0/0:45,0:49:99:0,111,2417	0/0:36,0:39:89.51:0,90,1950	0/0:27,0:28:67.91:0,68,1607	1/1:15,22:37:56.15:849,56,0	1/1:7,14:22:36.12:581,36,0	0/0:37,0:39:80.23:0,80,1795	0/0:22,0:22:51.18:0,51,1221	0/0:3,0:20:37.69:0,38,171	0/0:22,1:24:4.62:0,5,1089	0/0:22,0:24:53.75:0,54,1166	1/1:13,31:45:72.24:1135,72,0	1/1:8,13:21:33.11:530,33,0	0/0:24,0:24:66.23:0,66,1587	0/0:9,0:10:17.80:0,18,379	1/1:13,6:19:18.06:283,18,0	1/1:9,26:35:78.26:1200,78,0	1/1:9,14:23:27.04:362,27,0	0/0:8,0:28:60.36:0,60,285	0/1:11,1:32:38.35:38,0,213	0/1:4,3:24:97.56:98,0,137	0/0:26,0:26:66.01:0,66,1496	0/1:11,19:32:70.62:887,0,71	1/1:8,17:28:22.89:612,23,0	1/1:1,8:9:27.09:441,27,0
chr10	101105989	.	GTCTC	G	12784.50	PASS	AB=0.565;AC=31;AF=0.554;AN=56;BaseQRankSum=12.051;DP=763;FS=0.000;HRun=0;HaplotypeScore=137.2210;InbreedingCoeff=0.9091;MQ=73.77;MQ0=10;MQRankSum=-3.666;QD=33.56;ReadPosRankSum=3.050;VQSLOD=4.9341;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,41:54:90.78:1536,91,0	1/1:2,9:11:18.06:307,18,0	0/0:60,1:36:52.05:0,52,1388	0/0:70,0:39:67.01:0,67,1182	0/0:23,0:23:57.18:0,57,1343	0/0:38,0:40:99:0,102,2431	0/0:33,0:33:60.39:0,60,1979	1/1:9,24:33:72.21:1150,72,0	1/1:5,9:13:15.05:256,15,0	0/0:27,0:27:66.23:0,66,1538	0/0:17,0:18:47.95:0,48,1140	1/1:5,13:19:42.14:716,42,0	0/0:21,0:22:60.21:0,60,1481	0/0:21,1:23:17.85:0,18,1490	1/1:5,31:37:90.30:1511,90,0	1/1:2,30:32:87.30:1483,87,0	0/0:29,0:31:72.03:0,72,1728	0/0:9,0:9:24.08:0,24,558	1/1:7,12:18:36.12:614,36,0	1/1:3,20:23:51.17:870,51,0	1/1:7,24:30:54.18:921,54,0	1/1:4,12:16:33.11:563,33,0	1/1:2,21:23:57.10:972,57,0	1/1:2,8:10:21.07:358,21,0	0/0:25,0:25:54.19:0,54,1326	0/1:6,20:25:18.05:864,0,18	1/1:5,19:24:33.06:562,33,0	1/1:2,5:6:6.02:102,6,0
chr10	101106307	.	AG	A	2362.11	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.698;DP=605;FS=3.546;HRun=3;HaplotypeScore=65.1414;InbreedingCoeff=0.9889;MQ=86.76;MQ0=0;MQRankSum=-0.040;QD=30.68;ReadPosRankSum=2.096;VQSLOD=3.5175;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,1933	0/0:4,0:4:12.01:0,12,137	0/0:26,0:26:68.38:0,68,952	0/0:20,0:20:51.15:0,51,700	0/0:17,0:17:51.09:0,51,690	0/0:18,0:18:54.17:0,54,760	0/0:21,0:21:63.20:0,63,886	0/0:33,0:33:96.22:0,96,1304	0/0:17,0:17:51.17:0,51,734	0/0:31,0:31:90.29:0,90,1280	0/0:20,0:20:57.19:0,57,819	1/1:0,17:17:45.14:558,45,0	0/0:25,0:25:75.20:0,75,1005	0/0:21,0:21:63.19:0,63,879	0/0:24,0:24:69.19:0,69,938	0/0:19,0:18:57.16:0,57,768	0/0:29,0:29:87.23:0,87,1168	0/0:6,0:6:18.06:0,18,259	0/0:26,0:26:78.22:0,78,1052	0/0:19,0:19:48.16:0,48,691	0/0:18,0:18:51.15:0,51,714	1/1:3,8:11:27.08:331,27,0	1/1:0,23:23:66.21:817,66,0	1/1:2,24:26:66.21:817,66,0	0/0:18,0:18:54.16:0,54,757	0/0:30,0:30:87.26:0,87,1194	0/0:20,0:20:57.16:0,57,782	0/0:18,0:18:54.07:0,54,660
chr10	101107734	.	CAGAGAGAGAGAGAGAGAGAG	C	5883.10	PASS	AB=1.000;AC=23;AF=0.426;AN=54;BaseQRankSum=7.383;DP=433;FS=13.448;HRun=0;HaplotypeScore=215.7051;InbreedingCoeff=0.6547;MQ=69.53;MQ0=12;MQRankSum=-4.978;QD=29.56;ReadPosRankSum=2.558;VQSLOD=2.5476;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:14.26:0,14,1022	1/1:7,1:8:3.01:160,3,0	0/1:25,0:16:5.12:5,0,39	0/0:37,0:19:9.50:0,9,228	0/0:12,0:16:27.09:0,27,1966	0/0:18,0:19:36.09:0,36,2500	0/0:11,0:11:24.08:0,24,1879	1/1:10,0:10:6.01:72,6,0	0/0:7,0:15:24.05:0,24,1183	0/0:12,0:17:36.12:0,36,2644	0/0:19,0:18:27.09:0,27,2004	1/1:13,0:13:15.05:390,15,0	0/0:11,0:17:30.09:0,30,1110	0/0:8,0:8:5.86:0,6,506	1/1:8,3:11:9.03:481,9,0	1/1:6,3:10:12.04:592,12,0	0/0:10,0:22:39.13:0,39,2699	0/0:15,0:14:24.06:0,24,1417	1/1:13,2:15:12.03:487,12,0	1/1:9,14:24:30.10:1365,30,0	./.	0/1:12,0:12:24.20:24,0,123	0/1:28,0:28:99:466,0,128	0/0:5,0:5:6.02:0,6,117	0/0:9,0:9:21.05:0,21,1555	1/1:10,14:25:39.06:1328,39,0	1/1:7,0:9:12.39:352,12,0	1/1:7,1:7:3.01:160,3,0
chr10	101107765	.	AGAGAGAGAGAGAGAGCGC	A	4526.37	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=9.390;DP=399;FS=2.775;HRun=0;HaplotypeScore=187.7323;InbreedingCoeff=0.3198;MQ=62.99;MQ0=15;MQRankSum=-8.016;QD=35.92;ReadPosRankSum=6.667;VQSLOD=3.1420;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:28.91:0,29,1640	0/1:3,0:3:43.95:88,0,44	0/0:19,0:10:24.03:0,24,459	0/0:31,0:12:14.41:0,14,516	0/0:19,0:19:51.18:0,51,2936	0/0:20,0:19:42.13:0,42,2302	0/0:18,0:15:36.12:0,36,2286	0/0:12,0:11:9.86:0,10,395	0/0:16,0:16:38.62:0,39,1373	0/0:22,0:22:64.76:0,65,3130	0/0:18,0:18:48.16:0,48,2567	1/1:0,10:10:15.05:801,15,0	0/0:14,0:14:30.02:0,30,1038	0/0:8,0:8:17.66:0,18,740	0/1:8,0:8:74.84:271,0,75	0/1:5,0:5:34.92:327,0,35	0/0:26,0:26:54.18:0,54,2704	0/0:13,0:11:27.46:0,27,1197	0/1:10,0:10:99:237,0,262	0/1:26,0:26:99:693,0,266	0/0:6,0:4:3.01:0,3,50	1/1:10,0:10:11.99:242,12,0	1/1:2,15:17:18.12:904,18,0	1/1:6,0:6:9.03:147,9,0	0/0:14,0:14:36.12:0,36,2315	0/1:24,0:24:99:555,0,433	0/1:5,0:5:82.02:168,0,82	1/1:2,0:1:3.01:91,3,0
chr10	101107767	.	AGAGAGAGAGAGAGCGC	A	3852.51	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=9.803;DP=396;FS=5.628;HRun=0;HaplotypeScore=176.6405;InbreedingCoeff=0.3252;MQ=67.01;MQ0=14;MQRankSum=-8.289;QD=30.58;ReadPosRankSum=6.764;VQSLOD=1.9845;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:27.56:0,28,1474	0/1:3,0:3:43.95:74,0,44	0/0:21,0:12:30.05:0,30,525	0/0:29,0:12:15.04:0,15,470	0/0:19,0:19:51.17:0,51,2526	0/0:22,0:21:48.16:0,48,2169	0/0:18,0:15:36.12:0,36,2032	0/0:12,0:11:32.73:0,33,440	0/0:16,0:16:22.02:0,22,1122	0/0:21,0:21:61.76:0,62,2724	0/0:19,0:19:51.16:0,51,2288	1/1:10,0:10:15.05:632,15,0	0/0:13,0:13:27.09:0,27,811	0/0:8,0:8:17.66:0,18,657	0/1:8,0:8:74.84:229,0,75	0/1:5,0:5:34.92:271,0,35	0/0:26,0:26:54.17:0,54,2363	0/0:11,0:9:20.03:0,20,964	0/1:10,0:10:99:195,0,288	0/1:27,0:27:99:575,0,334	0/0:6,0:4:3.01:0,3,50	1/1:0,9:9:12.04:338,12,0	1/1:16,0:16:18.22:722,18,0	1/1:5,0:5:9.03:147,9,0	0/0:14,0:14:36.02:0,36,2044	0/1:24,0:24:99:457,0,466	0/1:7,0:7:99:134,0,182	1/1:2,0:1:3.01:77,3,0
chr10	101108040	.	G	GAA	584.80	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.926;DP=555;FS=2.912;HRun=10;HaplotypeScore=71.9079;InbreedingCoeff=0.7767;MQ=82.95;MQ0=0;MQRankSum=-1.209;QD=26.58;ReadPosRankSum=-1.989;VQSLOD=3.3892;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:22:47.65:679,48,0	0/0:4,0:4:12.03:0,12,122	0/0:22,0:23:44.45:0,44,378	0/0:13,0:12:1.40:0,1,55	0/0:23,0:24:47.79:0,48,534	0/0:21,0:21:60.13:0,60,610	0/0:23,0:24:65.84:0,66,645	0/0:33,0:34:68.80:0,69,743	0/0:18,0:19:46.48:0,46,435	0/0:23,0:23:54.09:0,54,544	0/0:25,0:26:59.78:0,60,584	0/0:9,0:9:18.03:0,18,183	0/0:15,0:15:38.52:0,39,395	0/0:16,0:17:38.73:0,39,378	0/0:27,0:27:75.15:0,75,763	0/0:30,0:30:68.24:0,68,700	0/0:18,0:18:23.53:0,24,407	0/0:20,0:20:45.06:0,45,458	0/0:18,0:19:38.77:0,39,438	0/0:30,0:30:72.09:0,72,732	0/0:14,0:14:39.08:0,39,397	0/0:5,0:5:15.03:0,15,151	0/0:24,0:24:60.90:0,61,581	0/0:17,0:17:51.11:0,51,518	0/0:12,0:12:24.04:0,24,244	0/0:26,0:27:71.89:0,72,713	0/0:29,0:31:63.31:0,63,787	0/0:7,0:7:21.05:0,21,213
chr10	101108587	.	T	TC	3149.30	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.634;DP=706;FS=9.634;HRun=0;HaplotypeScore=80.3557;InbreedingCoeff=0.9977;MQ=88.66;MQ0=0;MQRankSum=-2.713;QD=33.50;ReadPosRankSum=3.269;VQSLOD=2.6016;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1492	0/0:7,0:7:21.07:0,21,294	0/0:21,0:21:63.21:0,63,869	0/0:30,0:30:81.17:0,81,1052	0/0:27,0:27:81.27:0,81,1133	0/0:29,0:29:87.28:0,87,1200	0/0:24,0:24:72.24:0,72,1007	0/0:46,0:46:99:0,132,1802	0/0:18,0:18:54.18:0,54,755	0/0:31,0:31:84.28:0,84,1175	0/0:34,0:34:99:0,102,1426	1/1:1,26:27:21.25:852,21,0	0/0:25,0:25:75.25:0,75,1049	0/0:16,0:16:48.15:0,48,654	0/0:36,0:36:99:0,108,1492	0/0:22,0:22:66.20:0,66,889	0/0:20,0:20:60.20:0,60,836	0/0:14,0:14:42.14:0,42,585	0/0:27,0:27:81.24:0,81,1085	0/0:26,0:26:72.21:0,72,971	0/0:29,0:29:87.29:0,87,1217	1/1:2,24:26:48.16:710,48,0	1/1:0,12:12:33.11:493,33,0	1/1:0,29:29:84.28:1254,84,0	0/0:25,0:25:75.25:0,75,1048	0/0:26,0:26:78.26:0,78,1091	0/0:26,0:26:69.18:0,69,911	0/0:15,0:15:45.15:0,45,628
chr10	101109192	.	GATATATATATATATAT	G	3037.46	PASS	AC=16;AF=0.421;AN=38;BaseQRankSum=3.759;DP=208;FS=2.916;HRun=0;HaplotypeScore=94.5026;InbreedingCoeff=0.6883;MQ=68.15;MQ0=4;MQRankSum=-1.432;QD=41.05;ReadPosRankSum=-0.021;VQSLOD=2.7275;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:10:6.02:0,6,329	1/1:3,2:5:6.02:211,6,0	./.	0/0:14,0:7:6.42:0,6,49	0/0:5,0:7:15.04:0,15,487	0/0:3,0:3:3.01:0,3,200	./.	1/1:17,10:26:20.17:402,20,0	./.	0/0:5,0:4:6.02:0,6,453	./.	0/0:7,0:7:6.02:0,6,170	0/0:3,0:3:6.02:0,6,330	0/0:2,0:3:6.02:0,6,400	./.	1/1:3,5:8:12.04:450,12,0	0/0:11,0:20:39.13:0,39,2105	0/0:17,0:24:63.22:0,63,3433	1/1:2,7:9:21.07:851,21,0	1/1:2,3:5:6.02:207,6,0	./.	./.	0/0:5,0:5:3.01:0,3,100	./.	./.	1/1:5,6:10:15.05:667,15,0	1/1:5,2:7:3.01:132,3,0	1/1:0,2:2:6.02:267,6,0
chr10	101109616	.	CT	C	3035.67	PASS	AB=0.801;AC=48;AF=0.857;AN=56;BaseQRankSum=-2.484;DP=568;FS=2.581;HRun=2;HaplotypeScore=190.8451;InbreedingCoeff=0.0592;MQ=42.12;MQ0=0;MQRankSum=-1.652;QD=5.41;ReadPosRankSum=6.414;VQSLOD=0.7347;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:23,7:30:6.91:171,7,0	1/1:9,0:9:5.07:32,5,0	0/0:7,0:4:8.66:0,9,74	0/1:7,0:4:9.55:46,0,10	1/1:17,4:21:25.85:145,26,0	1/1:13,5:18:20.78:107,21,0	1/1:9,13:22:15.33:120,15,0	0/1:10,17:27:24.19:235,0,24	1/1:29,7:36:21.90:188,22,0	1/1:12,4:16:30.27:176,30,0	1/1:16,8:24:26.01:132,26,0	0/1:13,8:21:0.60:71,0,1	1/1:30,5:35:30.26:146,30,0	1/1:23,6:29:2.36:82,2,0	0/1:26,3:29:10.60:75,0,11	1/1:24,9:33:7.32:102,7,0	1/1:16,7:22:15.92:114,16,0	1/1:8,8:16:16.18:170,16,0	1/1:8,5:13:34.59:185,35,0	0/1:11,4:15:41.86:42,0,56	0/1:12,5:17:6.84:67,0,7	1/1:7,3:10:4.57:24,5,0	1/1:11,2:13:2.80:13,3,0	1/1:2,13:15:15.56:55,16,0	1/1:13,6:19:21.56:99,22,0	1/1:15,6:21:39.25:233,39,0	1/1:32,5:36:47.40:248,47,0	1/1:1,4:5:14.70:92,15,0
chr10	101109623	.	C	CT	11399.90	PASS	AB=0.925;AC=54;AF=0.964;AN=56;BaseQRankSum=-1.529;DP=603;FS=3.570;HRun=2;HaplotypeScore=154.8139;InbreedingCoeff=-0.0475;MQ=43.89;MQ0=1;MQRankSum=0.260;QD=18.91;ReadPosRankSum=2.740;VQSLOD=5.1354;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:21,9:30:58.38:718,58,0	1/1:6,0:6:6.02:85,6,0	0/1:13,1:10:27.90:50,0,28	0/1:10,1:6:34.18:34,0,50	1/1:19,5:24:33.09:428,33,0	1/1:13,6:19:32.58:392,33,0	1/1:10,17:27:54.10:598,54,0	1/1:8,18:26:54.17:708,54,0	1/1:27,9:36:57.17:727,57,0	1/1:11,6:17:35.71:428,36,0	1/1:16,10:26:42.05:497,42,0	1/1:11,8:19:24.06:261,24,0	1/1:28,7:35:42.07:493,42,0	1/1:25,7:32:45.11:545,45,0	1/1:23,6:29:38.79:470,39,0	1/1:23,10:33:42.10:478,42,0	1/1:16,8:23:31.03:404,31,0	1/1:7,9:17:39.08:500,39,0	1/1:8,9:17:39.13:525,39,0	1/1:11,4:15:7.26:207,7,0	1/1:15,5:20:20.87:247,21,0	1/1:6,3:9:9.03:106,9,0	1/1:11,4:15:12.04:159,12,0	1/1:4,13:17:24:233,24,0	1/1:13,8:21:33.10:411,33,0	1/1:15,8:23:56.97:701,57,0	1/1:27,6:32:54.17:708,54,0	1/1:2,6:8:21.07:284,21,0
chr10	101110145	.	G	GCATA	1122.70	PASS	AB=0.687;AC=3;AF=0.054;AN=56;BaseQRankSum=7.110;DP=654;FS=48.570;HRun=0;HaplotypeScore=120.2747;InbreedingCoeff=-0.0584;MQ=88.95;MQ0=0;MQRankSum=-7.096;QD=19.03;ReadPosRankSum=0.897;VQSLOD=1.0727;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,2362	0/0:11,0:11:30.10:0,30,552	0/0:25,0:25:66.15:0,66,1057	0/0:25,0:25:69.23:0,69,1202	0/0:29,0:29:75.26:0,75,1369	0/0:22,0:22:60.21:0,60,1104	0/0:17,0:17:51.17:0,51,938	0/0:27,0:27:69.22:0,69,1212	0/0:22,0:22:60.21:0,60,1104	0/0:24,0:24:66.23:0,66,1214	0/0:28,0:28:84.27:0,84,1512	0/1:19,11:30:99:713,0,742	0/0:22,0:22:60.21:0,60,1104	0/0:27,0:27:72.25:0,72,1312	0/0:30,0:30:87.28:0,87,1570	0/0:19,0:19:57.20:0,57,1038	0/0:22,0:22:63.22:0,63,1159	0/0:19,0:19:41.53:0,42,757	0/0:18,0:18:42.14:0,42,773	0/0:31,0:31:90.31:0,90,1646	0/0:33,0:33:93.29:0,93,1650	0/1:6,5:11:92.05:219,0,92	0/1:8,10:18:99:291,0,197	0/0:16,3:19:12.04:0,12,221	0/0:29,0:29:84.29:0,84,1546	0/0:17,0:17:48.16:0,48,875	0/0:27,0:26:78.25:0,78,1390	0/0:6,0:6:15.05:0,15,276
chr10	101111169	.	AAAT	A	440.06	PASS	AB=0.938;AC=12;AF=0.333;AN=36;BaseQRankSum=4.006;DP=161;FS=8.673;HRun=0;HaplotypeScore=32.0094;InbreedingCoeff=0.4629;MQ=68.79;MQ0=0;MQRankSum=-0.809;QD=7.21;ReadPosRankSum=0.310;VQSLOD=0.5061;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:18.06:0,18,343	0/0:2,0:2:3.01:0,3,57	./.	./.	0/0:11,0:11:6.02:0,6,115	0/0:4,0:6:9.03:0,9,143	./.	0/1:11,0:11:0:0,0,0	0/0:3,0:3:3.01:0,3,48	0/0:5,0:5:9.03:0,9,172	./.	0/0:8,0:8:3.01:0,3,57	./.	0/0:6,0:6:6.02:0,6,112	0/0:7,0:7:6.02:0,6,114	1/1:2,0:2:3:26,3,0	1/1:4,9:13:21.07:275,21,0	0/1:12,2:14:45.52:46,0,448	./.	./.	./.	./.	0/0:5,0:6:3.01:0,3,39	./.	0/0:5,0:5:9.03:0,9,172	1/1:1,3:4:9.03:118,9,0	1/1:6,0:9:8.93:63,9,0	1/1:8,0:8:3.01:39,3,0
chr10	101111222	.	G	GA	396.68	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.111;DP=207;FS=16.738;HRun=4;HaplotypeScore=22.8480;InbreedingCoeff=0.7238;MQ=69.47;MQ0=0;MQRankSum=-0.238;QD=26.45;ReadPosRankSum=-1.059;VQSLOD=1.2964;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:27.08:0,27,306	0/0:1,0:1:3.01:0,3,34	0/0:2,0:2:6.01:0,6,61	0/0:3,0:3:9.03:0,9,102	0/0:11,0:11:30.09:0,30,340	0/0:6,0:6:15.04:0,15,170	0/0:4,0:4:12.03:0,12,135	0/0:24,0:24:66.19:0,66,748	0/0:5,0:5:15.04:0,15,170	0/0:10,0:10:30.09:0,30,340	0/0:5,0:5:12.03:0,12,136	1/1:1,1:2:3.01:41,3,0	0/0:3,0:3:9.03:0,9,102	0/0:6,0:6:18.05:0,18,204	0/0:8,0:8:18.04:0,18,195	0/0:5,0:5:12.03:0,12,136	0/0:17,0:17:45.13:0,45,508	0/0:14,0:14:33.09:0,33,374	0/0:8,0:8:24.05:0,24,261	0/0:7,0:7:21.06:0,21,238	0/0:2,0:2:6.02:0,6,68	1/1:0,5:5:12.04:164,12,0	1/1:0,7:7:21.07:287,21,0	1/1:0,1:1:3.01:41,3,0	0/0:8,0:8:24.07:0,24,272	0/0:6,0:6:18.05:0,18,204	0/0:9,0:9:24.07:0,24,272	0/0:18,0:18:36.10:0,36,408
chr10	101111311	.	G	GA	4708.61	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=0.577;DP=369;FS=0.000;HRun=5;HaplotypeScore=39.0155;InbreedingCoeff=0.9399;MQ=68.04;MQ0=0;MQRankSum=0.457;QD=33.63;ReadPosRankSum=0.159;VQSLOD=4.6252;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:39.10:0,39,418	1/1:0,6:6:18.06:237,18,0	0/0:8,0:7:17.20:0,17,151	0/0:5,0:5:9.02:0,9,96	0/0:18,0:18:48.12:0,48,516	0/0:18,0:17:48.12:0,48,516	0/0:9,0:9:24.06:0,24,258	1/1:2,18:21:57.14:731,57,0	0/0:4,0:4:9.02:0,9,97	0/0:21,0:21:60.14:0,60,640	0/0:13,0:13:36.09:0,36,387	0/0:5,0:5:15.04:0,15,161	0/0:11,0:11:30.07:0,30,322	0/0:13,0:13:33.08:0,33,355	1/1:2,8:10:21.07:276,21,0	1/1:0,9:9:24.08:316,24,0	0/0:28,0:28:72.18:0,72,773	0/0:18,0:18:50.34:0,50,523	1/1:1,17:18:51.17:671,51,0	1/1:1,19:20:57.19:750,57,0	1/1:1,7:8:24.06:300,24,0	0/0:14,0:14:33.08:0,33,354	0/0:10,0:10:27.07:0,27,290	0/0:9,0:9:24.06:0,24,258	0/0:10,0:10:30.08:0,30,322	1/1:1,10:11:0.85:363,1,0	1/1:0,19:18:54.18:710,54,0	1/1:3,15:18:27.09:355,27,0
chr10	101111715	.	A	AT	2584.36	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=13.175;DP=586;FS=2.031;HRun=8;HaplotypeScore=80.5256;InbreedingCoeff=0.9351;MQ=77.81;MQ0=0;MQRankSum=-2.456;QD=11.29;ReadPosRankSum=0.354;VQSLOD=2.7424;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:23.20:113,23,0	1/1:1,12:13:33.10:381,33,0	0/0:27,0:22:47.67:0,48,413	0/0:22,0:18:26.12:0,26,224	0/0:22,0:22:57.02:0,57,519	0/0:27,0:27:78.04:0,78,714	0/0:21,0:21:60.03:0,60,549	1/1:26,0:26:51.87:294,52,0	0/0:24,0:24:66.01:0,66,599	0/0:20,0:20:42:0,42,380	0/0:20,0:20:51.01:0,51,466	0/0:15,0:15:33.01:0,33,302	0/0:16,0:16:41.99:0,42,379	0/0:19,0:19:54.03:0,54,494	1/1:19,0:19:40.65:232,41,0	1/1:19,0:19:37.82:219,38,0	0/0:26,0:26:69.03:0,69,632	0/0:16,0:16:45:0,45,405	1/1:27,0:27:47.68:266,48,0	1/1:24,0:24:27.30:248,27,0	1/1:16,0:16:35:209,35,0	0/0:19,0:19:54.02:0,54,494	0/0:25,0:25:75.02:0,75,680	0/0:19,0:19:54.03:0,54,494	0/0:19,0:19:51.02:0,51,467	0/1:16,0:16:7.04:161,0,7	1/1:36,0:36:90.76:559,91,0	1/1:15,0:15:20.45:122,20,0
chr10	101111723	.	T	TC	6510.62	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=1.338;DP=571;FS=2.403;HRun=1;HaplotypeScore=66.7621;InbreedingCoeff=0.9633;MQ=75.80;MQ0=0;MQRankSum=-1.581;QD=30.42;ReadPosRankSum=1.193;VQSLOD=4.6313;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:12:26.79:193,27,0	1/1:12,0:12:27.33:98,27,0	0/0:25,0:20:47.08:0,47,537	0/0:20,0:16:0.33:0,0,250	0/0:21,0:21:63.14:0,63,732	0/0:28,0:28:84.23:0,84,1043	0/0:22,0:22:63.18:0,63,786	1/1:0,21:21:60.17:812,60,0	0/0:25,0:25:72.18:0,72,865	0/0:17,0:17:42.12:0,42,513	0/0:23,0:23:63.13:0,63,738	0/0:12,0:12:36.11:0,36,449	0/0:16,0:16:42.13:0,42,531	0/0:24,0:24:69.05:0,69,788	1/1:0,19:19:42.14:594,42,0	1/1:0,20:20:39.13:552,39,0	0/0:25,0:25:75.20:0,75,924	0/0:15,0:15:45.15:0,45,574	1/1:0,22:22:66.13:856,66,0	1/1:1,21:22:56.95:703,57,0	1/1:0,20:20:36.12:509,36,0	0/0:18,0:18:54.16:0,54,682	0/0:25,0:25:75.18:0,75,907	0/0:21,0:21:57.17:0,57,720	0/0:20,0:20:54.17:0,54,687	1/1:2,14:17:44.60:582,45,0	1/1:0,37:37:93.14:1314,93,0	1/1:0,12:12:21.07:297,21,0
chr10	101112021	.	CA	C	2626.45	PASS	AB=0.989;AC=14;AF=0.250;AN=56;BaseQRankSum=3.647;DP=548;FS=0.390;HRun=8;HaplotypeScore=76.8677;InbreedingCoeff=0.5907;MQ=71.48;MQ0=1;MQRankSum=-1.518;QD=12.63;ReadPosRankSum=2.325;VQSLOD=3.1063;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,39:42:99:985,102,0	0/0:11,0:11:26.16:0,26,103	0/0:20,0:17:21.54:0,22,233	0/0:16,0:12:14.32:0,14,91	0/0:26,0:26:69.07:0,69,784	0/0:13,0:13:39.08:0,39,437	0/0:18,0:18:51.13:0,51,592	0/1:24,0:24:24.60:25,0,99	0/0:8,0:8:16.07:0,16,214	0/0:21,0:20:60.13:0,60,681	0/0:20,0:20:57.17:0,57,688	1/1:1,20:21:42.95:407,43,0	0/0:16,0:16:42.12:0,42,497	0/0:13,0:13:36.09:0,36,422	0/1:20,0:20:25.33:25,0,96	0/0:21,0:21:51.14:0,51,604	0/0:29,0:28:81.18:0,81,937	0/0:19,0:19:57.10:0,57,656	0/0:22,0:22:5.54:0,6,143	0/0:23,0:23:30.56:0,31,183	0/0:13,0:13:10.46:0,10,91	1/1:4,8:12:21.02:203,21,0	1/1:3,27:30:75.07:710,75,0	1/1:3,15:18:42.06:404,42,0	0/0:18,0:18:45.14:0,45,543	0/1:20,0:20:30.33:30,0,139	0/1:20,1:21:22.63:23,0,131	0/0:13,0:13:27.55:0,28,116
chr10	101112694	.	AC	A	3602.52	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=14.644;DP=676;FS=15.384;HRun=1;HaplotypeScore=75.0882;InbreedingCoeff=0.9994;MQ=88.08;MQ0=0;MQRankSum=-0.584;QD=39.16;ReadPosRankSum=1.654;VQSLOD=2.6201;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.24:0,81,1245	0/0:14,0:14:42.12:0,42,645	0/0:26,0:26:72.17:0,72,1076	0/0:21,0:21:57.16:0,57,847	0/0:36,0:36:99:0,108,1667	0/0:27,0:27:81.23:0,81,1223	0/0:27,0:27:81.28:0,81,1292	0/0:33,0:33:99:0,99,1580	0/0:13,0:13:39.12:0,39,597	0/0:28,0:28:84.29:0,84,1343	0/0:27,0:27:81.25:0,81,1245	1/1:0,27:27:75.22:1028,75,0	0/0:23,0:23:69.24:0,69,1102	0/0:14,0:14:42.14:0,42,671	0/0:20,0:20:60.16:0,60,890	0/0:25,0:25:75.24:0,75,1173	0/0:37,0:37:99:0,111,1723	0/0:27,0:27:81.26:0,81,1271	0/0:14,0:14:42.13:0,42,648	0/0:28,0:28:84.26:0,84,1312	0/0:23,0:23:69.21:0,69,1078	1/1:0,25:25:72.24:1007,72,0	1/1:0,32:32:93.16:1232,93,0	1/1:0,8:8:24.08:336,24,0	0/0:27,0:27:81.28:0,81,1294	0/0:23,0:23:69.23:0,69,1081	0/0:27,0:27:81.26:0,81,1267	0/0:17,0:17:51.17:0,51,815
chr10	101113631	.	T	TCAG	2286.33	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.619;DP=684;FS=14.309;HRun=0;HaplotypeScore=110.5899;InbreedingCoeff=0.9643;MQ=93.17;MQ0=0;MQRankSum=-9.480;QD=50.81;ReadPosRankSum=-2.008;VQSLOD=4.1136;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:99:0,126,2210	0/0:8,0:8:24.08:0,24,423	0/0:33,0:33:87.30:0,87,1487	0/0:31,0:31:87.19:0,87,1468	0/0:24,0:24:63.20:0,63,1083	0/0:14,0:14:42.14:0,42,741	0/0:37,0:37:99:0,108,1906	0/0:31,0:31:90.29:0,90,1525	0/0:32,0:32:90.29:0,90,1552	0/0:29,0:29:81.28:0,81,1418	0/0:12,0:12:33.11:0,33,582	1/1:4,12:16:45.15:1042,45,0	0/0:31,0:31:87.30:0,87,1535	0/0:19,0:19:57.20:0,57,1005	0/0:41,0:41:99:0,117,1997	0/0:28,0:28:84.25:0,84,1398	0/0:31,0:31:90.28:0,90,1557	0/0:11,0:10:27.08:0,27,447	0/0:29,0:29:78.25:0,78,1324	0/0:25,0:25:75.26:0,75,1300	0/0:39,0:39:99:0,108,1906	1/1:5,11:16:39.13:903,39,0	1/1:7,3:10:15.05:352,15,0	1/1:1,2:3:6.02:141,6,0	0/0:10,0:10:27.06:0,27,444	0/0:33,0:33:99:0,99,1743	0/0:30,0:30:87.28:0,87,1506	0/0:17,0:17:51.15:0,51,869
chr10	101113645	.	C	CA	1029.86	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.146;DP=665;FS=13.631;HRun=4;HaplotypeScore=76.4055;InbreedingCoeff=0.9442;MQ=93.58;MQ0=0;MQRankSum=-7.704;QD=23.41;ReadPosRankSum=-0.877;VQSLOD=1.9077;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:99:0,120,1361	0/0:7,0:7:18.05:0,18,204	0/0:30,0:30:75.16:0,75,810	0/0:33,0:33:58.61:0,59,830	0/0:24,0:24:66.19:0,66,748	0/0:12,0:12:36.09:0,36,399	0/0:36,0:36:81.22:0,81,919	0/0:34,0:34:87.25:0,87,987	0/0:32,0:32:93.25:0,93,1045	0/0:28,0:28:84.24:0,84,952	0/0:12,0:12:30.08:0,30,340	1/1:6,9:15:30.06:383,30,0	0/0:28,0:28:81.19:0,81,905	0/0:19,0:19:51.15:0,51,579	0/0:39,0:39:99:0,108,1225	0/0:29,0:29:81.21:0,81,909	0/0:29,0:29:81.21:0,81,907	0/0:7,0:6:18.05:0,18,204	0/0:29,0:29:84.23:0,84,946	0/0:27,0:27:75.21:0,75,850	0/0:36,0:36:99:0,102,1147	1/1:0,14:14:27.09:369,27,0	1/1:0,10:10:30.06:389,30,0	1/1:2,3:5:3:41,3,0	0/0:13,0:13:33.09:0,33,374	0/0:29,0:29:84.24:0,84,953	0/0:32,0:32:93.25:0,93,1044	0/0:15,0:15:45.08:0,45,480
chr10	101113721	.	C	CT	3479.82	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-0.024;DP=656;FS=0.898;HRun=3;HaplotypeScore=67.9515;InbreedingCoeff=0.9914;MQ=83.50;MQ0=0;MQRankSum=-4.201;QD=39.54;ReadPosRankSum=1.853;VQSLOD=3.7948;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,1332	0/0:4,0:4:12.04:0,12,144	0/0:22,0:22:45.13:0,45,536	0/0:22,0:22:37.71:0,38,638	0/0:28,0:28:75.23:0,75,897	0/0:18,0:18:51.16:0,51,612	0/0:25,0:25:75.23:0,75,900	0/0:27,0:27:72.20:0,72,845	0/0:29,0:29:78.24:0,78,936	0/0:29,0:29:81.25:0,81,972	0/0:21,0:21:60.18:0,60,719	1/1:1,20:21:60.20:839,60,0	0/0:35,0:35:99:0,99,1174	0/0:20,0:20:57.16:0,57,671	0/0:27,0:27:78.23:0,78,924	0/0:36,0:36:99:0,102,1212	0/0:25,0:25:72.21:0,72,853	0/0:14,0:14:39.12:0,39,468	0/0:19,0:19:48.14:0,48,567	0/0:31,0:31:93.22:0,93,1073	0/0:24,0:24:66.20:0,66,791	1/1:2,22:25:66.22:921,66,0	1/1:1,22:23:66.22:923,66,0	1/1:0,19:19:57.19:797,57,0	0/0:15,0:15:42.13:0,42,503	0/0:26,0:26:65.87:0,66,792	0/0:17,0:16:51.16:0,51,612	0/0:14,0:14:42.13:0,42,503
chr10	101113897	.	TTCC	T	961.98	PASS	AB=0.968;AC=14;AF=0.259;AN=54;BaseQRankSum=1.975;DP=451;FS=2.409;HRun=0;HaplotypeScore=118.7045;InbreedingCoeff=0.4215;MQ=53.20;MQ0=1;MQRankSum=-2.519;QD=6.87;ReadPosRankSum=1.498;VQSLOD=2.8827;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:47.82:0,48,576	1/1:3,0:3:3:28,3,0	0/0:14,0:12:9.03:0,9,91	0/0:14,0:11:0.57:0,1,1	0/0:27,0:27:48.06:0,48,763	0/0:16,0:16:18.04:0,18,329	0/0:12,0:12:14.83:0,15,190	0/1:13,0:9:3.50:72,0,3	0/0:9,0:9:24.04:0,24,416	0/0:25,0:25:42.11:0,42,714	0/0:21,0:21:14.95:0,15,256	0/0:11,0:11:8.98:0,9,88	0/0:14,0:14:30.07:0,30,509	0/0:22,0:22:47.90:0,48,655	0/1:10,0:10:21.21:82,0,21	1/1:24,0:24:11.18:262,11,0	0/0:27,0:27:41.48:0,41,529	0/0:15,0:15:15.03:0,15,223	0/1:13,4:17:13.17:76,0,13	0/1:23,0:23:7.85:165,0,8	1/1:15,0:15:11.89:92,12,0	0/0:10,0:10:5.94:0,6,41	./.	0/0:13,0:13:8.99:0,9,92	0/0:18,0:18:23.96:0,24,386	1/1:16,0:16:20.84:191,21,0	0/1:10,0:10:1.24:87,0,1	0/1:9,0:9:70.45:70,0,79
chr10	101114469	.	AC	A	1878.63	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.306;DP=420;FS=4.917;HRun=5;HaplotypeScore=58.5356;InbreedingCoeff=0.9789;MQ=75.20;MQ0=1;MQRankSum=-2.320;QD=28.90;ReadPosRankSum=1.470;VQSLOD=4.1608;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:93.27:0,93,1248	0/0:3,0:3:9.03:0,9,123	0/0:21,0:19:20.82:0,21,574	0/0:20,0:19:28.57:0,29,440	0/0:20,0:20:60.20:0,60,819	0/0:17,0:17:45.15:0,45,614	0/0:21,0:21:60.20:0,60,820	0/0:13,0:13:36.11:0,36,478	0/0:12,0:12:36.12:0,36,492	0/0:28,0:28:84.27:0,84,1133	0/0:9,0:9:27.09:0,27,369	1/1:0,17:17:48.14:544,48,0	0/0:10,0:10:24.08:0,24,327	0/0:12,0:12:36.12:0,36,492	0/0:9,0:9:27.09:0,27,369	0/0:23,0:23:69.14:0,69,900	0/0:14,0:14:39.13:0,39,533	0/0:11,0:11:27.09:0,27,369	0/0:10,0:10:27.09:0,27,369	0/0:12,0:12:33.11:0,33,449	0/0:12,0:12:33.11:0,33,451	1/1:0,15:15:39.11:442,39,0	1/1:0,12:12:32.79:373,33,0	1/1:0,21:21:60.17:680,60,0	0/0:7,0:7:21.06:0,21,272	0/0:13,0:13:39.13:0,39,534	0/0:14,0:14:42.14:0,42,574	0/0:9,0:9:24.08:0,24,327
chr10	101114583	.	CTTTACAG	C	2235.17	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.290;DP=585;FS=29.065;HRun=0;HaplotypeScore=136.4632;InbreedingCoeff=0.9891;MQ=82.63;MQ0=0;MQRankSum=-9.093;QD=43.83;ReadPosRankSum=-0.692;VQSLOD=1.5042;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.28:0,81,2915	0/0:9,0:9:24.08:0,24,856	0/0:14,0:14:39.13:0,39,1347	0/0:24,0:24:66.23:0,66,2336	0/0:31,0:31:90.31:0,90,3185	0/0:28,0:28:81.28:0,81,3030	0/0:31,0:31:93.32:0,93,3447	0/0:27,0:27:78.27:0,78,2894	0/0:15,0:14:42.14:0,42,1589	0/0:24,0:24:69.24:0,69,2597	0/0:18,0:18:54.19:0,54,1998	1/1:1,14:15:30.10:760,30,0	0/0:19,0:19:51.18:0,51,2007	0/0:24,0:24:66.23:0,66,2558	0/0:28,0:28:81.28:0,81,2999	0/0:28,0:28:78.27:0,78,2967	0/0:21,0:21:60.21:0,60,2065	0/0:23,0:23:66.23:0,66,2467	0/0:17,0:17:45.11:0,45,1494	0/0:24,0:24:72.25:0,72,2820	0/0:13,0:13:39.12:0,39,1397	1/1:3,12:15:36.12:912,36,0	1/1:1,5:6:15.05:342,15,0	1/1:2,13:15:14.41:379,14,0	0/0:21,0:21:57.20:0,57,2119	0/0:25,0:25:69.24:0,69,2674	0/0:29,0:29:78.27:0,78,3048	0/0:10,0:10:24.08:0,24,923
chr10	101116255	.	CTAAGGAAGTAGGTTTTAGAA	C	5143.23	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.498;DP=734;FS=0.000;HRun=0;HaplotypeScore=392.6664;InbreedingCoeff=0.9804;MQ=86.88;MQ0=0;MQRankSum=-9.232;QD=97.04;ReadPosRankSum=1.912;VQSLOD=3.3555;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,10880	0/0:19,0:19:57.15:0,57,4292	0/0:24,0:24:72.25:0,72,4560	0/0:28,0:28:84.29:0,84,5148	0/0:37,0:37:99:0,108,9184	0/0:31,0:31:93.32:0,93,7477	0/0:20,0:20:57.18:0,57,4805	0/0:38,0:38:99:0,114,9129	0/0:29,0:29:87.28:0,87,7278	0/0:33,0:33:96.33:0,96,8669	0/0:28,0:28:84.29:0,84,7559	1/1:2,8:10:18.06:1027,18,0	0/0:31,0:31:93.32:0,93,7925	0/0:21,0:21:63.22:0,63,5646	0/0:36,0:36:99:0,108,9241	0/0:27,0:27:81.28:0,81,6859	0/0:27,0:27:81.26:0,81,6892	0/0:26,0:26:78.25:0,78,6337	0/0:26,0:26:75.26:0,75,5174	0/0:38,0:38:99:0,111,9922	0/0:43,0:43:99:0,129,11490	1/1:6,17:23:42.14:2328,42,0	1/1:2,11:13:27.09:1488,27,0	1/1:4,3:7:9.03:300,9,0	0/0:23,0:23:69.24:0,69,6085	0/0:19,0:19:57.20:0,57,4493	0/0:29,0:29:87.28:0,87,6585	0/0:8,0:8:24.08:0,24,2323
chr10	101116482	.	A	AG	930.16	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.724;DP=637;FS=5.488;HRun=0;HaplotypeScore=149.4940;InbreedingCoeff=0.9965;MQ=82.27;MQ0=0;MQRankSum=-8.756;QD=16.04;ReadPosRankSum=1.783;VQSLOD=5.4285;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.01:0,75,954	0/0:9,0:9:27.08:0,27,361	0/0:22,0:22:63.14:0,63,856	0/0:22,0:22:60.18:0,60,818	0/0:23,0:23:69.23:0,69,964	0/0:25,0:25:75.25:0,75,1047	0/0:23,0:23:69.23:0,69,964	0/0:38,0:38:99:0,114,1437	0/0:20,0:20:60.18:0,60,819	0/0:32,0:32:96.30:0,96,1301	0/0:24,0:24:72.11:0,72,976	1/1:4,14:18:34.75:397,35,0	0/0:28,0:28:84.28:0,84,1166	0/0:30,0:30:84.28:0,84,1166	0/0:29,0:29:84.06:0,84,1083	0/0:29,0:29:87.27:0,87,1192	0/0:20,0:20:60.15:0,60,784	0/0:23,0:23:66.22:0,66,922	0/0:18,0:18:54.10:0,54,685	0/0:35,0:35:99:0,102,1333	0/0:15,0:15:27.09:0,27,377	1/1:5,7:12:23.92:193,24,0	1/1:3,12:15:38.81:316,39,0	1/1:3,10:13:19.25:184,19,0	0/0:25,0:25:75.16:0,75,944	0/0:22,0:22:66.18:0,66,897	0/0:31,0:30:93.28:0,93,1274	0/0:8,0:8:24.04:0,24,313
chr10	101116484	.	C	CATG	2409.84	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.359;DP=636;FS=4.226;HRun=0;HaplotypeScore=176.7633;InbreedingCoeff=0.9945;MQ=82.62;MQ0=0;MQRankSum=-8.868;QD=36.51;ReadPosRankSum=1.018;VQSLOD=4.1282;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.16:0,72,1268	0/0:9,0:9:24.08:0,24,445	0/0:24,0:24:72.24:0,72,1272	0/0:21,0:21:60.21:0,60,1105	0/0:23,0:23:69.24:0,69,1287	0/0:25,0:25:75.26:0,75,1398	0/0:24,0:24:69.24:0,69,1287	0/0:37,0:37:99:0,111,1981	0/0:20,0:20:60.18:0,60,1086	0/0:30,0:30:90.30:0,90,1652	0/0:24,0:24:72.25:0,72,1326	1/1:7,14:21:33.81:878,34,0	0/0:28,0:28:84.29:0,84,1565	0/0:30,0:30:87.30:0,87,1617	0/0:28,0:28:84.27:0,84,1548	0/0:29,0:29:84.29:0,84,1565	0/0:17,0:17:51.17:0,51,951	0/0:25,0:25:75.22:0,75,1326	0/0:16,0:16:45.11:0,45,803	0/0:36,0:36:99:0,102,1861	0/0:15,0:15:27.09:0,27,503	1/1:6,7:13:27.09:450,27,0	1/1:4,12:16:39.13:678,39,0	1/1:6,10:16:16.53:563,17,0	0/0:21,0:21:63.21:0,63,1140	0/0:22,0:22:66.23:0,66,1228	0/0:31,0:30:93.32:0,93,1721	0/0:7,0:7:21.07:0,21,391
chr10	101116503	.	CTAACAT	C	13367.62	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=11.581;DP=615;FS=2.273;HRun=0;HaplotypeScore=175.6212;InbreedingCoeff=0.9964;MQ=77.29;MQ0=0;MQRankSum=-16.869;QD=59.68;ReadPosRankSum=1.574;VQSLOD=5.2210;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,17:24:57.11:1162,57,0	1/1:3,4:7:18.06:414,18,0	0/0:21,0:21:50.86:0,51,1472	0/0:15,0:15:36.07:0,36,1063	0/0:27,0:27:81.28:0,81,2886	0/0:24,0:24:72.25:0,72,2375	0/0:22,0:22:63.22:0,63,2182	1/1:7,22:29:66.23:1560,66,0	0/0:24,0:24:66.23:0,66,2345	0/0:35,0:35:93.32:0,93,3157	0/0:24,0:24:66.21:0,66,2094	0/0:26,0:26:72.21:0,72,2475	0/0:25,0:25:66.23:0,66,2239	0/0:32,0:32:96.33:0,96,3401	1/1:6,20:26:69.24:1579,69,0	1/1:3,23:26:78.24:1739,78,0	0/0:20,0:20:57.20:0,57,1951	0/0:23,0:23:66.23:0,66,2301	1/1:3,9:12:33.11:727,33,0	1/1:3,33:36:99:2339,102,0	1/1:2,11:13:30.10:685,30,0	0/0:15,0:15:39.13:0,39,1165	0/0:14,0:14:30.10:0,30,907	0/0:16,0:16:38.16:0,38,1073	0/0:28,0:28:78.27:0,78,2698	1/1:3,18:21:54.19:1275,54,0	1/1:5,20:25:66.23:1534,66,0	1/1:0,5:5:15.05:355,15,0
chr10	101116553	.	T	TAA	13258.94	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=6.369;DP=662;FS=13.415;HRun=0;HaplotypeScore=130.0221;InbreedingCoeff=0.9981;MQ=84.34;MQ0=0;MQRankSum=-13.454;QD=57.40;ReadPosRankSum=-2.208;VQSLOD=3.1949;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:45.15:911,45,0	1/1:0,6:6:18.06:365,18,0	0/0:24,0:24:69.23:0,69,1087	0/0:25,0:25:75.25:0,75,1175	0/0:28,0:28:81.26:0,81,1297	0/0:20,0:20:60.20:0,60,962	0/0:28,0:28:84.27:0,84,1344	1/1:4,29:33:96.33:1940,96,0	0/0:28,0:28:84.27:0,84,1347	0/0:35,0:35:99:0,105,1645	0/0:20,0:20:57.18:0,57,905	0/0:30,0:30:84.29:0,84,1360	0/0:29,0:29:87.30:0,87,1413	0/0:27,0:27:81.28:0,81,1315	1/1:4,20:24:66.23:1332,66,0	1/1:0,19:19:54.19:1096,54,0	0/0:25,0:25:75.26:0,75,1217	0/0:20,0:20:54.18:0,54,881	1/1:7,16:23:69.24:1369,69,0	1/1:4,41:45:99:2616,132,0	1/1:1,10:11:26.73:506,27,0	0/0:23,0:23:66.23:0,66,1075	0/0:18,0:18:54.02:0,54,765	0/0:15,0:15:39.13:0,39,623	0/0:36,0:36:99:0,108,1760	1/1:2,19:21:60.21:1217,60,0	1/1:1,24:25:75.22:1480,75,0	1/1:0,7:7:21.07:426,21,0
chr10	101116601	.	T	TG	10026.29	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-2.935;DP=677;FS=0.626;HRun=1;HaplotypeScore=104.0853;InbreedingCoeff=0.9987;MQ=74.14;MQ0=1;MQRankSum=-7.904;QD=42.85;ReadPosRankSum=-1.818;VQSLOD=4.1284;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:45.15:714,45,0	1/1:0,11:11:27.09:431,27,0	0/0:20,0:20:54.17:0,54,730	0/0:9,0:9:27.09:0,27,358	0/0:22,0:22:66.22:0,66,921	0/0:23,0:23:69.23:0,69,962	0/0:29,0:29:84.27:0,84,1153	1/1:2,33:34:99:1524,99,0	0/0:30,0:30:90.30:0,90,1259	0/0:37,0:37:99:0,108,1496	0/0:20,0:20:57.19:0,57,796	0/0:28,0:28:75.12:0,75,982	0/0:31,0:31:93.31:0,93,1298	0/0:23,0:23:69.23:0,69,961	1/1:1,33:34:93.32:1482,93,0	0/0:15,0:15:42.10:0,42,550	0/0:27,0:27:81.25:0,81,1112	0/0:12,0:12:33.11:0,33,462	1/1:0,15:15:45.13:683,45,0	1/1:0,42:42:99:1914,120,0	1/1:0,10:10:21.07:335,21,0	0/0:34,0:34:90.15:0,90,1170	0/0:29,0:29:87.28:0,87,1199	0/0:15,0:15:30.10:0,30,419	0/0:39,0:39:99:0,114,1588	1/1:1,16:17:51.17:794,51,0	1/1:1,42:44:99:1765,111,0	1/1:0,8:8:24.08:383,24,0
chr10	101116707	.	CT	C	2679.87	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.611;DP=717;FS=0.946;HRun=2;HaplotypeScore=123.3829;InbreedingCoeff=0.9993;MQ=76.78;MQ0=0;MQRankSum=-1.019;QD=33.08;ReadPosRankSum=0.831;VQSLOD=3.2374;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1566	0/0:9,0:9:27.09:0,27,403	0/0:13,0:13:39.07:0,39,509	0/0:20,0:20:57.14:0,57,767	0/0:34,0:34:99:0,102,1509	0/0:23,0:23:69.22:0,69,1013	0/0:27,0:27:81.25:0,81,1174	0/0:34,0:34:99:0,102,1511	0/0:25,0:25:72.24:0,72,1079	0/0:32,0:32:93.31:0,93,1378	0/0:27,0:27:81.26:0,81,1194	1/1:0,21:21:60.20:777,60,0	0/0:31,0:31:93.32:0,93,1394	0/0:38,0:38:99:0,111,1644	0/0:35,0:35:90.30:0,90,1344	0/0:34,0:34:99:0,102,1488	0/0:20,0:20:60.20:0,60,899	0/0:11,0:11:33.11:0,33,494	0/0:34,0:34:99:0,102,1455	0/0:46,0:45:99:0,135,1943	0/0:12,0:12:27.09:0,27,404	1/1:0,20:20:54.18:701,54,0	1/1:1,24:25:72.23:934,72,0	1/1:0,15:15:33.11:428,33,0	0/0:25,0:25:75.25:0,75,1124	0/0:27,0:27:72.24:0,72,1078	0/0:30,0:29:90.30:0,90,1345	0/0:14,0:14:39.13:0,39,584
chr10	101116772	.	GAATGTACGTC	G	11315.86	PASS	AB=0.545;AC=17;AF=0.304;AN=56;BaseQRankSum=12.555;DP=622;FS=0.000;HRun=0;HaplotypeScore=222.2242;InbreedingCoeff=0.8784;MQ=86.54;MQ0=0;MQRankSum=-16.052;QD=76.46;ReadPosRankSum=1.521;VQSLOD=4.1422;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,6649	1/1:1,5:6:15.05:509,15,0	0/0:25,0:25:75.26:0,75,3400	0/0:22,0:22:63.14:0,63,2992	0/0:26,0:26:78.27:0,78,4123	0/0:21,0:21:63.22:0,63,3305	0/0:24,0:24:72.21:0,72,3603	1/1:3,12:15:36.12:1222,36,0	0/0:31,0:31:90.31:0,90,4646	0/0:28,0:28:84.29:0,84,4441	0/0:27,0:27:78.27:0,78,4032	0/0:28,0:28:81.24:0,81,4175	0/0:32,0:32:96.32:0,96,4663	0/0:30,0:30:90.31:0,90,4729	1/1:7,32:39:87.30:2920,87,0	0/0:20,0:20:60.21:0,60,3146	0/0:15,0:15:42.14:0,42,2249	0/0:9,0:9:27.09:0,27,1456	1/1:6,12:18:36.12:1176,36,0	1/1:4,23:28:69.24:2289,69,0	1/1:2,6:8:12.51:384,13,0	0/0:13,0:13:39.13:0,39,2009	0/0:20,0:20:57.20:0,57,2899	0/0:23,0:23:57.15:0,57,2807	0/0:36,0:36:99:0,108,5715	0/1:2,10:12:99:985,0,129	1/1:2,19:20:51.17:1730,51,0	1/1:0,1:1:3.01:102,3,0
chr10	101117897	.	GAAAAAAAA	G	1880.65	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=2.391;DP=686;FS=8.906;HRun=18;HaplotypeScore=189.9953;InbreedingCoeff=0.9417;MQ=67.68;MQ0=7;MQRankSum=-6.415;QD=24.11;ReadPosRankSum=4.347;VQSLOD=-0.7558;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:32:83.53:0,84,1085	0/0:13,0:13:24.08:0,24,864	0/0:51,0:15:12.28:0,12,263	0/0:47,0:21:5.24:0,5,505	0/0:30,0:30:75.18:0,75,2168	0/0:22,0:23:57.18:0,57,1655	0/0:17,0:21:57.12:0,57,1749	0/0:25,0:25:48.82:0,49,1300	0/0:21,0:21:45.15:0,45,1446	0/0:12,0:22:54.19:0,54,1590	0/0:28,0:29:66.22:0,66,2115	1/1:5,14:19:11.26:260,11,0	0/0:24,0:24:51.16:0,51,1748	0/0:20,0:20:48.14:0,48,1607	0/0:19,0:19:27.08:0,27,886	0/0:14,0:22:51.14:0,51,723	0/0:18,0:19:51.17:0,51,1617	0/0:18,0:22:57.17:0,57,1861	0/0:30,0:30:87.26:0,87,2385	0/0:32,0:32:81.26:0,81,2374	0/0:18,0:18:39.12:0,39,1322	1/1:4,18:22:41.75:769,42,0	1/1:0,16:16:30.02:664,30,0	1/1:3,18:21:17.86:343,18,0	0/0:24,0:24:54.19:0,54,1641	0/0:22,0:22:51.17:0,51,1539	0/0:28,0:28:57.58:0,58,1948	0/0:9,0:9:15.02:0,15,297
chr10	101117908	.	A	AAAG	5984.21	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-8.275;DP=685;FS=0.353;HRun=0;HaplotypeScore=124.0136;InbreedingCoeff=0.9613;MQ=65.09;MQ0=9;MQRankSum=1.760;QD=28.91;ReadPosRankSum=2.973;VQSLOD=4.6987;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:91.69:0,92,776	1/1:0,10:11:24.08:419,24,0	0/0:54,0:16:22.33:0,22,229	0/0:52,0:20:31.23:0,31,347	0/0:27,0:27:77.48:0,77,761	0/0:22,0:22:53.59:0,54,535	0/0:21,0:21:56.69:0,57,628	1/1:6,23:32:47.99:756,48,0	0/0:17,0:17:38.03:0,38,348	0/0:23,0:22:58.02:0,58,488	0/0:25,0:25:67.80:0,68,656	0/0:15,0:15:14.58:0,15,140	0/0:21,0:21:55.25:0,55,552	0/0:19,0:19:48.65:0,49,497	1/1:1,12:15:23.95:369,24,0	0/0:21,0:21:47.14:0,47,398	0/0:19,0:19:56.88:0,57,584	0/0:24,0:24:59.29:0,59,608	1/1:6,27:36:91.67:1276,92,0	1/1:5,25:32:50.08:913,50,0	1/1:2,14:19:27.92:560,28,0	0/0:19,0:19:41.85:0,42,365	0/0:18,0:18:32.62:0,33,305	0/0:19,0:19:17.97:0,18,160	0/0:24,0:24:66.29:0,66,601	1/1:11,8:22:24.45:684,24,0	1/1:0,25:27:57.88:948,58,0	1/1:5,5:13:1.80:58,2,0
chr10	101118107	.	ATCACG	A	4368.60	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.096;DP=655;FS=0.000;HRun=0;HaplotypeScore=133.7294;InbreedingCoeff=0.9897;MQ=82.11;MQ0=0;MQRankSum=-4.196;QD=53.93;ReadPosRankSum=3.257;VQSLOD=4.8366;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,3187	0/0:4,0:4:12.04:0,12,346	0/0:16,0:16:19.42:0,19,1239	0/0:22,0:22:60.03:0,60,1802	0/0:29,0:29:87.30:0,87,2876	0/0:29,0:29:84.25:0,84,2523	0/0:18,0:18:54.19:0,54,1729	0/0:33,0:33:99:0,99,3091	0/0:22,0:22:63.22:0,63,2068	0/0:21,0:21:63.21:0,63,1951	0/0:22,0:22:66.21:0,66,2105	1/1:0,20:20:48.16:1088,48,0	0/0:23,0:23:66.23:0,66,2142	0/0:27,0:27:81.28:0,81,2674	0/0:20,0:20:60.21:0,60,1967	0/0:25,0:25:75.25:0,75,1674	0/0:30,0:30:90.31:0,90,2973	0/0:26,0:26:78.27:0,78,2521	0/0:25,0:25:75.25:0,75,2302	0/0:19,0:19:57.20:0,57,1834	0/0:32,0:32:96.33:0,96,3093	1/1:0,15:15:36.12:838,36,0	1/1:0,17:17:42.14:975,42,0	1/1:0,29:29:63.82:1468,64,0	0/0:18,0:18:54.17:0,54,1721	0/0:20,0:20:60.21:0,60,1876	0/0:37,0:36:99:0,108,3347	0/0:11,0:11:33.11:0,33,1061
chr10	101118296	.	AT	A	1147.70	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.623;DP=509;FS=5.886;HRun=7;HaplotypeScore=78.5507;InbreedingCoeff=0.9526;MQ=78.62;MQ0=0;MQRankSum=-0.351;QD=21.25;ReadPosRankSum=2.084;VQSLOD=3.4598;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:33.02:0,33,379	0/0:9,0:9:24.08:0,24,301	0/0:14,0:14:33.10:0,33,410	0/0:11,0:11:23.91:0,24,239	0/0:38,0:38:99:0,105,1308	0/0:36,0:36:99:0,102,1271	0/0:15,0:15:39.12:0,39,480	0/0:28,0:27:63.19:0,63,779	0/0:15,0:15:42.12:0,42,506	0/0:22,1:23:42.29:0,42,630	0/0:18,0:18:48.15:0,48,604	1/1:3,15:18:39.07:394,39,0	0/0:24,0:24:66.20:0,66,818	0/0:13,0:13:36.09:0,36,429	0/0:14,0:14:39.12:0,39,490	0/0:15,0:15:33.11:0,33,415	0/0:22,0:22:57.18:0,57,717	0/0:13,0:13:36.12:0,36,453	0/0:23,0:23:66.21:0,66,823	0/0:30,0:30:69.21:0,69,855	0/0:3,0:3:9.03:0,9,113	1/1:1,16:17:45.09:454,45,0	1/1:2,14:16:39.07:393,39,0	1/1:0,3:3:6.01:61,6,0	0/0:17,0:17:51.14:0,51,627	0/0:22,0:22:57.18:0,57,717	0/0:23,0:22:60.18:0,60,754	0/0:17,0:17:51.16:0,51,642
chr10	101118375	.	T	TA	4743.92	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=7.454;DP=462;FS=6.567;HRun=8;HaplotypeScore=72.9145;InbreedingCoeff=0.8930;MQ=70.60;MQ0=0;MQRankSum=-0.435;QD=23.96;ReadPosRankSum=-1.945;VQSLOD=4.7783;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:28:58.70:349,59,0	1/1:0,5:5:15.04:173,15,0	0/1:10,0:10:14.65:15,0,49	0/0:5,0:5:1.24:0,1,3	0/0:31,0:31:84.02:0,84,761	0/0:22,0:22:63.01:0,63,569	0/0:12,0:12:30.01:0,30,275	1/1:6,23:29:72.03:799,72,0	0/0:13,0:13:39.01:0,39,352	0/0:16,0:16:45.02:0,45,412	0/0:23,0:23:63.01:0,63,571	0/0:19,0:19:51.02:0,51,467	0/0:18,0:18:51.02:0,51,466	0/0:13,0:13:39.02:0,39,357	1/1:0,18:18:51.15:589,51,0	1/1:0,0:13:29.43:178,29,0	0/0:19,0:19:57.01:0,57,515	0/0:11,0:11:26.04:0,26,226	1/1:5,16:21:48.05:527,48,0	1/1:3,22:25:69.17:779,69,0	1/1:1,4:5:12.04:139,12,0	0/0:7,0:7:18.01:0,18,165	0/0:18,0:18:50.90:0,51,454	0/0:14,0:14:41.82:0,42,369	0/0:23,0:23:63.03:0,63,577	1/1:3,12:16:14.49:403,14,0	1/1:2,20:22:51.15:588,51,0	1/1:0,6:6:18.05:208,18,0
chr10	101118607	.	A	AG	1222.26	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.043;DP=562;FS=10.965;HRun=1;HaplotypeScore=75.5321;InbreedingCoeff=0.9968;MQ=75.04;MQ0=0;MQRankSum=-11.170;QD=17.71;ReadPosRankSum=0.051;VQSLOD=2.6557;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1314	0/0:10,0:10:27.04:0,27,318	0/0:11,0:11:33.02:0,33,363	0/0:13,0:12:30.95:0,31,352	0/0:37,0:37:99:0,108,1328	0/0:9,0:9:27.08:0,27,338	0/0:21,0:21:55.89:0,56,757	0/0:24,0:24:69.20:0,69,849	0/0:21,0:21:57.14:0,57,686	0/0:27,0:27:78.24:0,78,976	0/0:20,0:20:60.17:0,60,745	1/1:6,12:18:47.65:382,48,0	0/0:22,0:22:66.17:0,66,811	0/0:25,0:25:72.19:0,72,887	0/0:25,0:25:75.22:0,75,935	0/0:21,0:21:60.17:0,60,750	0/0:34,0:34:99:0,99,1195	0/0:11,0:11:33.11:0,33,427	0/0:15,0:15:39.11:0,39,474	0/0:23,0:23:69.20:0,69,866	0/0:14,0:14:42.09:0,42,512	1/1:5,10:15:41.72:331,42,0	1/1:4,15:19:52.56:396,53,0	1/1:5,12:17:36.04:273,36,0	0/0:21,0:21:63.16:0,63,774	0/0:19,0:19:54.16:0,54,666	0/0:28,0:27:83.86:0,84,1059	0/0:6,0:6:18.06:0,18,232
chr10	101118617	.	A	ACAC	2559.25	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.382;DP=589;FS=18.339;HRun=0;HaplotypeScore=100.0236;InbreedingCoeff=0.9641;MQ=79.05;MQ0=0;MQRankSum=-10.985;QD=33.67;ReadPosRankSum=1.710;VQSLOD=3.1354;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,2179	0/0:11,0:11:33.11:0,33,615	0/0:16,0:16:45.15:0,45,754	0/0:15,0:15:36.07:0,36,573	0/0:34,0:34:99:0,102,1866	0/0:10,0:10:30.10:0,30,543	0/0:25,0:25:72.16:0,72,1242	0/0:24,0:24:69.23:0,69,1233	0/0:15,0:15:45.15:0,45,839	0/0:30,0:30:90.31:0,90,1662	0/0:19,0:19:51.17:0,51,931	1/1:5,12:18:30.39:715,30,0	0/0:19,0:19:57.14:0,57,963	0/0:24,0:24:69.24:0,69,1270	0/0:23,0:23:66.23:0,66,1225	0/0:22,0:22:66.23:0,66,1225	0/0:33,0:33:99:0,99,1786	0/0:13,0:13:39.12:0,39,695	0/0:18,0:18:54.18:0,54,990	0/0:22,0:22:66.21:0,66,1183	0/0:15,0:15:42.14:0,42,783	1/1:4,10:16:33.11:576,33,0	1/1:4,13:22:34.87:799,35,0	1/1:4,12:20:5.14:622,5,0	0/0:22,0:22:66.23:0,66,1213	0/0:22,0:22:57.20:0,57,1063	0/0:30,0:29:87.30:0,87,1589	0/0:9,0:9:27.09:0,27,486
chr10	101119398	.	C	CA	1265.19	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.638;DP=569;FS=4.149;HRun=4;HaplotypeScore=81.5560;InbreedingCoeff=0.9619;MQ=68.65;MQ0=1;MQRankSum=-8.626;QD=30.86;ReadPosRankSum=-0.583;VQSLOD=3.7617;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.22:0,87,972	0/0:3,0:3:6.02:0,6,68	0/0:30,0:18:40.36:0,40,369	0/0:43,0:31:52.07:0,52,569	0/0:28,0:28:81.17:0,81,885	0/0:28,0:28:84.19:0,84,928	0/0:17,0:17:42.12:0,42,476	0/0:27,0:27:63.18:0,63,711	0/0:13,0:13:33.08:0,33,364	0/0:18,0:18:48.12:0,48,534	0/0:24,0:24:69.18:0,69,772	1/1:1,10:11:30.10:409,30,0	0/0:16,0:16:42.12:0,42,476	0/0:17,0:17:45.11:0,45,501	0/0:17,0:17:45.13:0,45,508	0/0:20,0:20:54.13:0,54,597	0/0:40,0:40:99:0,111,1255	0/0:21,0:21:60.17:0,60,680	0/0:21,0:21:63.18:0,63,712	0/0:22,0:22:60.16:0,60,675	0/0:12,0:12:30.08:0,30,340	1/1:1,11:12:33.11:442,33,0	1/1:2,10:12:30.10:408,30,0	1/1:1,5:5:12.04:164,12,0	0/0:21,0:21:60.17:0,60,680	0/0:26,0:26:72.20:0,72,813	0/0:23,0:22:57.16:0,57,646	0/0:9,0:9:27.08:0,27,306
chr10	101119453	.	GA	G	1138.52	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.002;DP=500;FS=0.585;HRun=7;HaplotypeScore=95.4703;InbreedingCoeff=0.9747;MQ=64.75;MQ0=1;MQRankSum=-4.781;QD=23.24;ReadPosRankSum=-0.331;VQSLOD=3.1500;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:41.90:0,42,342	0/0:8,0:8:20.86:0,21,150	0/0:16,0:15:35.69:0,36,393	0/0:10,0:8:9.52:0,10,110	0/0:27,0:27:78.25:0,78,981	0/0:14,0:14:39.11:0,39,478	0/0:21,0:21:54.17:0,54,679	0/0:28,0:28:65.51:0,66,487	0/0:15,0:15:45.14:0,45,566	0/0:20,0:20:57.18:0,57,708	0/0:23,0:23:66.20:0,66,818	1/1:0,12:12:36.08:367,36,0	0/0:18,0:18:51.16:0,51,642	0/0:13,0:13:33.11:0,33,415	0/0:22,0:22:53.73:0,54,411	0/0:20,0:20:50.69:0,51,387	0/0:30,0:30:78.24:0,78,968	0/0:19,0:19:54.17:0,54,679	0/0:24,0:24:59.58:0,60,454	0/0:18,0:18:41.80:0,42,326	0/0:10,0:10:26.84:0,27,199	1/1:1,13:14:39.09:398,39,0	1/1:2,13:15:39.09:397,39,0	1/1:2,6:7:14.82:135,15,0	0/0:23,0:23:63.20:0,63,792	0/0:29,0:29:80.30:0,80,622	0/0:20,0:19:50.85:0,51,410	0/0:5,0:5:14.89:0,15,108
chr10	101119540	.	A	ACTT	8579.09	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=12.117;DP=501;FS=33.876;HRun=0;HaplotypeScore=106.9814;InbreedingCoeff=0.9888;MQ=63.07;MQ0=0;MQRankSum=-15.214;QD=46.88;ReadPosRankSum=-2.217;VQSLOD=3.2799;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,8:11:24.08:537,24,0	1/1:2,6:8:18.06:428,18,0	0/0:8,0:8:21.04:0,21,293	0/0:8,0:8:21.01:0,21,322	0/0:23,0:23:69.22:0,69,1241	0/0:23,0:23:69.24:0,69,1275	0/0:22,0:22:66.14:0,66,981	1/1:7,21:29:74.87:1329,75,0	0/0:14,0:14:42.12:0,42,711	0/0:26,0:26:78.24:0,78,1335	0/0:17,0:17:51.16:0,51,908	0/0:1,0:13:36.87:0,37,187	0/0:24,0:24:72.23:0,72,1273	0/0:12,0:12:36.12:0,36,638	1/1:3,12:16:29.86:722,30,0	1/1:3,19:23:32.82:736,33,0	0/0:27,0:27:81.22:0,81,1401	0/0:23,0:23:69.20:0,69,1196	1/1:7,12:19:44.89:879,45,0	1/1:2,19:24:57.19:1250,57,0	1/1:0,4:4:9.03:214,9,0	0/0:2,0:15:39.92:0,40,218	0/0:1,0:18:45.47:0,45,228	0/0:3,0:23:62.84:0,63,324	0/0:21,0:21:63.17:0,63,1071	1/1:1,18:19:42.02:909,42,0	1/1:1,17:17:33.11:786,33,0	1/1:3,9:12:33.11:790,33,0
chr10	101119903	.	CT	C	7139.67	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.200;DP=641;FS=5.916;HRun=3;HaplotypeScore=96.8415;InbreedingCoeff=0.9953;MQ=74.72;MQ0=0;MQRankSum=-8.476;QD=32.90;ReadPosRankSum=0.626;VQSLOD=4.8615;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,1766	1/1:0,5:5:12.04:147,12,0	0/0:18,0:18:48.10:0,48,620	0/0:26,0:26:56.84:0,57,778	0/0:24,0:24:69.22:0,69,975	0/0:24,0:24:72.24:0,72,1034	0/0:26,0:26:78.22:0,78,1065	1/1:4,12:16:36.07:428,36,0	0/0:29,0:29:84.28:0,84,1206	0/0:22,1:23:29.01:0,29,852	0/0:20,0:20:57.17:0,57,787	0/0:21,0:21:60.19:0,60,847	0/0:20,0:20:57.18:0,57,799	0/0:23,0:23:66.19:0,66,894	1/1:0,26:26:69.17:837,69,0	1/1:1,33:34:93.29:1152,93,0	0/0:22,0:22:66.22:0,66,945	0/0:22,0:22:63.21:0,63,907	1/1:2,24:26:69.16:813,69,0	1/1:1,25:26:75.23:925,75,0	1/1:2,23:25:63.20:776,63,0	0/0:14,0:14:42.12:0,42,569	0/0:19,0:19:54.15:0,54,736	0/0:29,0:29:81.26:0,81,1147	0/0:20,0:19:57.17:0,57,789	1/1:1,25:26:75.24:929,75,0	1/1:1,20:21:57.14:689,57,0	1/1:0,12:12:36.11:446,36,0
chr10	101119974	.	AC	A	2448.11	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.626;DP=580;FS=0.000;HRun=6;HaplotypeScore=127.0442;InbreedingCoeff=0.9848;MQ=83.78;MQ0=0;MQRankSum=3.154;QD=27.82;ReadPosRankSum=1.275;VQSLOD=2.2265;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:41.82:0,42,329	0/0:7,0:7:14.78:0,15,107	0/0:26,0:26:53.40:0,53,851	0/0:19,0:19:48.08:0,48,572	0/0:20,0:20:60.17:0,60,760	0/0:20,0:20:51.17:0,51,671	0/0:26,0:26:69.21:0,69,891	0/0:20,0:20:38.66:0,39,281	0/0:25,0:25:66.21:0,66,854	0/0:26,0:26:69.22:0,69,895	0/0:17,0:17:51.17:0,51,670	1/1:0,23:23:66.17:709,66,0	0/0:20,0:20:54.18:0,54,711	0/0:25,0:25:69.22:0,69,895	0/0:25,0:25:56.68:0,57,441	0/0:22,0:22:46.97:0,47,340	0/0:27,0:27:75.23:0,75,971	0/0:21,0:21:60.20:0,60,789	0/0:21,0:21:48.31:0,48,336	0/0:15,0:15:23.62:0,24,166	0/0:21,0:21:20.77:0,21,159	1/1:2,26:28:75.19:804,75,0	1/1:1,20:21:57.14:612,57,0	1/1:0,16:16:45.11:483,45,0	0/0:18,0:18:48.14:0,48,605	0/0:20,0:20:47.58:0,48,385	0/0:20,0:20:40.43:0,40,293	0/0:7,0:7:11.96:0,12,95
chr10	101120144	.	G	GA	2684.30	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-1.462;DP=573;FS=7.317;HRun=1;HaplotypeScore=60.2956;InbreedingCoeff=0.9983;MQ=78.27;MQ0=0;MQRankSum=1.943;QD=38.90;ReadPosRankSum=0.077;VQSLOD=3.9339;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,1707	0/0:7,0:7:21.06:0,21,260	0/0:12,0:12:33.04:0,33,391	0/0:16,0:16:36.81:0,37,471	0/0:13,0:13:39.11:0,39,491	0/0:18,0:18:54.13:0,54,654	0/0:20,0:20:60.19:0,60,765	0/0:37,0:37:99:0,105,1327	0/0:20,0:20:47.21:0,47,660	0/0:17,0:17:51.15:0,51,639	0/0:15,0:15:42.07:0,42,491	1/1:0,28:28:84.28:1256,84,0	0/0:22,0:22:60.17:0,60,760	0/0:27,0:27:81.24:0,81,1019	0/0:30,0:30:90.28:0,90,1149	0/0:17,0:17:51.16:0,51,648	0/0:41,0:41:99:0,120,1524	0/0:27,0:27:81.22:0,81,1018	0/0:23,0:23:66.12:0,66,799	0/0:11,0:11:33.11:0,33,426	0/0:24,0:24:72.18:0,72,887	1/1:0,11:11:33.04:466,33,0	1/1:1,16:17:39.13:584,39,0	1/1:1,12:13:36.12:539,36,0	0/0:10,0:10:30.10:0,30,389	0/0:18,0:18:54.15:0,54,658	0/0:21,0:21:60.16:0,60,731	0/0:11,0:11:33.11:0,33,428
chr10	101120381	.	TC	T	2354.79	PASS	AB=1.000;AC=15;AF=0.288;AN=52;BaseQRankSum=6.602;DP=209;FS=7.990;HRun=7;HaplotypeScore=59.5667;InbreedingCoeff=0.4849;MQ=83.50;MQ0=0;MQRankSum=-0.730;QD=18.84;ReadPosRankSum=4.506;VQSLOD=2.9202;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:2.68:0,3,11	1/1:1,0:1:1.55:4,2,0	0/0:7,0:6:6.02:0,6,74	0/0:15,0:15:30:0,30,306	0/0:3,0:3:6.02:0,6,75	0/0:5,0:5:6.02:0,6,75	./.	0/0:5,0:5:0.23:0,0,10	0/0:1,0:1:3.01:0,3,37	0/0:5,0:5:15.05:0,15,188	0/0:1,0:1:3.01:0,3,37	1/1:2,27:29:75.17:764,75,0	0/0:6,0:6:12.04:0,12,149	0/0:4,0:4:12.01:0,12,122	1/1:6,0:6:0.04:2,0,0	0/0:5,0:5:3.18:0,3,19	0/0:2,0:2:2.56:0,3,32	0/0:4,0:4:3.01:0,3,37	./.	1/1:3,0:3:1.55:4,2,0	0/1:6,0:6:2.13:8,0,2	1/1:5,27:32:72.08:711,72,0	1/1:4,15:19:33.06:334,33,0	1/1:3,26:29:66.15:673,66,0	0/0:7,0:7:21.06:0,21,251	0/0:2,0:2:0.03:0,0,7	0/0:3,0:3:2.68:0,3,11	0/0:2,0:2:0.19:0,0,8
chr10	101120385	.	C	CA	655.91	PASS	AB=0.625;AC=19;AF=0.365;AN=52;BaseQRankSum=-2.080;DP=190;FS=17.560;HRun=0;HaplotypeScore=64.4684;InbreedingCoeff=0.5906;MQ=69.00;MQ0=0;MQRankSum=1.032;QD=18.74;ReadPosRankSum=-2.138;VQSLOD=3.5417;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:6:2.99:23,3,0	1/1:0,1:1:3.01:43,3,0	0/0:3,0:2:6.02:0,6,82	0/0:12,0:12:36.05:0,36,432	0/0:2,0:2:6.02:0,6,83	0/0:4,0:4:12.01:0,12,133	./.	1/1:0,3:3:8.84:82,9,0	0/0:1,0:1:3.01:0,3,42	0/0:5,0:5:15.05:0,15,209	0/0:1,0:1:3.01:0,3,42	0/0:31,0:31:77.84:0,78,427	0/0:5,0:5:12.04:0,12,162	0/0:4,0:4:12.02:0,12,125	1/1:2,2:4:0.60:40,1,0	0/1:2,3:5:6.87:122,0,7	0/0:2,0:2:5.93:0,6,48	0/0:1,0:1:3.01:0,3,41	./.	1/1:0,4:4:3.01:44,3,0	1/1:0,6:6:15.05:221,15,0	0/0:29,0:29:71.93:0,72,386	0/0:20,0:20:31.71:0,32,170	0/0:28,0:28:66.25:0,66,362	0/0:7,0:7:21.06:0,21,278	1/1:0,3:3:9.02:114,9,0	1/1:0,1:1:3.01:45,3,0	1/1:0,2:2:6.02:87,6,0
chr10	101120720	.	GGC	G	5023.45	PASS	AB=0.776;AC=28;AF=0.500;AN=56;BaseQRankSum=16.591;DP=454;FS=27.476;HRun=0;HaplotypeScore=146.1452;InbreedingCoeff=0.7711;MQ=76.95;MQ0=0;MQRankSum=-16.740;QD=22.43;ReadPosRankSum=1.174;VQSLOD=3.2022;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:35.13:279,35,0	1/1:0,3:3:9.03:113,9,0	0/0:19,0:17:44.10:0,44,602	0/0:18,0:18:47.73:0,48,615	0/0:18,0:18:54.14:0,54,872	0/0:30,0:30:87.21:0,87,1491	0/0:16,0:16:48.10:0,48,787	1/1:4,12:16:36.12:451,36,0	0/0:16,0:16:48.12:0,48,824	0/0:17,0:17:51.16:0,51,831	0/0:8,0:8:24.07:0,24,400	1/1:13,0:13:13.93:223,14,0	0/0:24,0:24:69.15:0,69,1174	0/0:14,0:14:42.11:0,42,694	1/1:1,19:20:57.18:713,57,0	1/1:22,0:22:7.74:341,8,0	0/0:23,0:23:69.21:0,69,1197	0/0:19,0:19:54.05:0,54,930	1/1:2,12:14:36.07:433,36,0	1/1:1,1:2:3.01:37,3,0	1/1:5,2:7:3.48:39,3,0	1/1:17,0:17:41.93:349,42,0	0/1:19,0:19:29.90:283,0,30	1/1:12,0:12:3.99:152,4,0	0/0:8,0:8:24.07:0,24,396	0/1:3,13:16:14.68:411,0,15	1/1:1,26:27:69.22:863,69,0	1/1:4,9:13:27.09:338,27,0
chr10	101120722	.	CGG	C	6152.03	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=16.208;DP=437;FS=20.211;HRun=7;HaplotypeScore=137.9493;InbreedingCoeff=0.8761;MQ=72.37;MQ0=0;MQRankSum=-16.402;QD=28.75;ReadPosRankSum=-0.955;VQSLOD=3.0256;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,16:21:36.04:439,36,0	1/1:3,0:3:9.03:113,9,0	0/0:14,0:12:30.08:0,30,470	0/0:17,0:17:39.12:0,39,643	0/0:18,0:18:50.54:0,51,848	0/0:29,0:29:81.28:0,81,1414	0/0:16,0:16:45.14:0,45,759	1/1:15,0:15:36.11:450,36,0	0/0:18,0:18:51.14:0,51,823	0/0:16,0:16:42.14:0,42,723	0/0:8,0:8:24.07:0,24,394	1/1:1,11:12:30.10:381,30,0	0/0:24,0:24:66.23:0,66,1149	0/0:14,0:14:36.12:0,36,630	1/1:20,0:20:57.18:713,57,0	1/1:3,18:21:51.16:644,51,0	0/0:23,0:23:66.22:0,66,1128	0/0:18,0:18:51.17:0,51,889	1/1:14,0:14:36.07:433,36,0	1/1:2,0:2:3.01:37,3,0	1/1:6,0:6:3.48:39,3,0	1/1:1,15:16:42.13:532,42,0	1/1:4,14:18:39.12:494,39,0	1/1:2,9:11:21.07:266,21,0	0/0:8,0:8:21.07:0,21,358	0/1:16,0:16:13.36:411,0,13	1/1:27,0:27:69.22:863,69,0	1/1:12,0:12:27.08:338,27,0
chr10	101120996	.	C	CT	8479.11	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=15.815;DP=423;FS=0.389;HRun=3;HaplotypeScore=95.6406;InbreedingCoeff=0.9719;MQ=72.33;MQ0=0;MQRankSum=-10.707;QD=35.18;ReadPosRankSum=0.956;VQSLOD=4.9691;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:54.14:712,54,0	1/1:1,8:9:23.90:283,24,0	0/0:12,0:12:31.64:0,32,358	0/0:9,0:9:19.24:0,19,245	0/0:17,0:17:48.15:0,48,576	0/0:23,0:23:60.18:0,60,720	0/0:10,0:10:21.06:0,21,252	1/1:3,20:23:60.11:752,60,0	0/0:12,0:12:33.10:0,33,396	0/0:13,0:13:39.12:0,39,468	0/0:17,0:17:48.15:0,48,576	1/1:0,10:10:30.10:412,30,0	0/0:12,0:12:36.11:0,36,432	0/0:11,0:11:30.09:0,30,360	1/1:0,19:19:57.11:742,57,0	1/1:1,10:11:30.10:412,30,0	0/0:15,0:15:45.14:0,45,540	0/0:17,0:17:51.16:0,51,609	1/1:1,16:17:48.11:622,48,0	1/1:4,19:23:54.12:704,54,0	1/1:0,8:8:18.06:248,18,0	1/1:1,8:9:21.07:290,21,0	1/1:2,13:15:39.13:533,39,0	1/1:0,7:7:18.03:227,18,0	0/0:14,0:14:42.09:0,42,478	1/1:3,23:26:3.18:852,3,0	1/1:3,23:26:69.23:948,69,0	1/1:1,18:19:54.18:742,54,0
chr10	101121105	.	TA	T	3941.11	PASS	AB=0.589;AC=28;AF=0.500;AN=56;BaseQRankSum=11.748;DP=342;FS=13.448;HRun=5;HaplotypeScore=62.7621;InbreedingCoeff=0.8186;MQ=86.62;MQ0=1;MQRankSum=-8.042;QD=26.10;ReadPosRankSum=-0.738;VQSLOD=1.9900;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,16:21:42.09:463,42,0	1/1:1,5:6:18.04:193,18,0	0/0:20,0:19:44.16:0,44,494	0/0:16,0:16:45.08:0,45,534	0/0:22,0:22:60.19:0,60,803	0/0:13,0:13:33.09:0,33,434	0/0:6,0:6:18.06:0,18,246	1/1:1,16:17:48.11:524,48,0	0/0:6,0:6:18.05:0,18,227	0/0:13,0:12:39.10:0,39,513	0/0:15,0:15:45.13:0,45,598	1/1:0,7:7:21.06:238,21,0	0/0:6,0:6:18.05:0,18,227	0/0:13,0:13:36.12:0,36,487	1/1:1,6:7:18.05:203,18,0	0/1:2,6:8:16.96:203,0,17	0/0:20,0:20:57.16:0,57,748	0/0:23,0:23:57.17:0,57,754	1/1:3,5:8:21:215,21,0	1/1:3,9:12:24.03:257,24,0	1/1:0,3:3:6.02:68,6,0	1/1:0,4:4:6.02:68,6,0	1/1:2,8:10:27.05:286,27,0	1/1:1,5:6:12.03:136,12,0	0/0:18,0:18:51.16:0,51,679	0/1:6,11:17:28.79:319,0,29	1/1:2,11:13:33.07:361,33,0	1/1:0,12:12:36.10:407,36,0
chr10	101121156	.	A	AC	2386.65	PASS	AC=28;AF=0.519;AN=54;BaseQRankSum=2.435;DP=312;FS=4.561;HRun=0;HaplotypeScore=71.0474;InbreedingCoeff=0.8402;MQ=55.47;MQ0=17;MQRankSum=-3.622;QD=18.94;ReadPosRankSum=0.205;VQSLOD=5.6652;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:21:10.26:202,10,0	1/1:0,1:2:2.99:24,3,0	0/0:14,0:6:18.06:0,18,241	0/0:16,0:10:27.07:0,27,345	0/0:9,0:17:36.43:0,36,405	0/0:7,0:10:26.96:0,27,296	0/0:10,0:9:24.06:0,24,315	1/1:0,21:20:57.15:849,57,0	0/0:8,0:7:19.23:0,19,195	0/0:14,0:14:36.08:0,36,451	0/0:8,0:10:27.06:0,27,337	1/1:3,9:12:11.74:264,12,0	0/0:5,0:9:24.02:0,24,275	0/0:7,0:13:24.03:0,24,293	./.	1/1:1,2:3:3.01:37,3,0	0/0:10,0:22:50.94:0,51,500	0/0:12,0:20:51.06:0,51,596	1/1:6,2:7:20.29:252,20,0	1/1:1,2:5:5.97:44,6,0	1/1:1,7:6:2.77:48,3,0	1/1:2,3:5:6.02:95,6,0	1/1:0,3:3:6.02:96,6,0	1/1:3,7:8:6.02:92,6,0	0/0:7,0:15:38.97:0,39,396	1/1:2,7:9:24.01:306,24,0	1/1:4,4:10:17.02:190,17,0	1/1:1,1:3:9:95,9,0
chr10	101121157	.	TG	T	1044.71	PASS	AB=1.000;AC=20;AF=0.370;AN=54;BaseQRankSum=6.464;DP=307;FS=16.609;HRun=1;HaplotypeScore=71.2546;InbreedingCoeff=0.6415;MQ=53.32;MQ0=17;MQRankSum=-2.957;QD=10.24;ReadPosRankSum=-0.061;VQSLOD=0.0394;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:7.58:84,8,0	1/1:2,0:2:3.01:39,3,0	0/0:14,0:6:18.05:0,18,222	0/0:15,0:9:23.43:0,23,265	0/0:18,0:18:31.61:0,32,309	0/0:8,1:10:7.70:0,8,192	0/0:11,0:9:23.25:0,23,247	1/1:18,0:17:44.80:345,45,0	0/0:9,0:8:13.47:0,13,138	0/0:14,0:13:36.57:0,37,462	0/0:10,0:10:26.30:0,26,345	0/0:13,0:12:1.36:0,1,31	0/0:10,0:9:21.50:0,21,195	0/0:12,1:13:18.84:0,19,233	./.	0/1:3,0:3:13.53:14,0,23	0/0:21,1:21:36.19:0,36,290	0/0:20,0:20:46.21:0,46,463	1/1:8,0:7:13.73:127,14,0	1/1:6,0:5:6.02:75,6,0	1/1:8,0:6:2.75:24,3,0	0/0:5,0:5:3.44:0,3,21	0/0:3,0:3:2.36:0,2,16	0/1:9,0:7:13.76:31,0,14	0/0:13,1:14:28:0,28,241	1/1:11,0:9:21.04:220,21,0	1/1:11,0:10:9.93:173,10,0	1/1:4,0:3:9.01:100,9,0
chr10	101121958	.	C	CGAAAAAAAAAAA	2776.35	PASS	AC=8;AF=0.222;AN=36;BaseQRankSum=7.045;DP=300;FS=11.700;HRun=0;HaplotypeScore=155.1541;InbreedingCoeff=0.8850;MQ=66.44;MQ0=9;MQRankSum=-5.701;QD=63.10;ReadPosRankSum=-4.972;VQSLOD=1.0888;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:15,0:13:32.86:0,33,734	0/0:6,0:4:5.87:0,6,164	0/0:27,0:26:78.24:0,78,2663	0/0:10,0:10:30.09:0,30,1052	0/0:28,0:27:29.70:0,30,2291	./.	0/0:10,0:10:30.09:0,30,1051	0/0:15,0:14:35.92:0,36,1333	0/0:22,0:22:63.22:0,63,2221	1/1:15,2:21:38.59:1732,39,0	0/0:25,0:25:71.82:0,72,2072	0/0:24,0:24:72.23:0,72,2549	./.	./.	0/0:31,0:31:93.31:0,93,3163	0/0:20,0:20:57.18:0,57,1846	./.	./.	./.	1/1:4,1:8:17.93:446,18,0	1/1:6,0:6:12.01:248,12,0	1/1:4,1:6:8.67:487,9,0	0/0:17,0:17:48.02:0,48,1709	0/0:2,0:1:3.01:0,3,114	./.	./.
chr10	101122469	.	CTG	C	2867.28	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.249;DP=847;FS=2.635;HRun=0;HaplotypeScore=171.7626;InbreedingCoeff=0.9999;MQ=73.06;MQ0=0;MQRankSum=-2.760;QD=26.31;ReadPosRankSum=3.695;VQSLOD=4.3879;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,132,2276	0/0:12,0:12:36.12:0,36,590	0/0:28,0:25:62.97:0,63,961	0/0:35,0:34:79.63:0,80,1240	0/0:34,0:34:93.29:0,93,1581	0/0:29,0:28:81.27:0,81,1406	0/0:29,0:29:81.28:0,81,1397	0/0:22,0:22:60.21:0,60,1052	0/0:39,0:39:99:0,111,1935	0/0:34,0:34:96.33:0,96,1672	0/0:28,0:28:81.26:0,81,1385	1/1:8,27:35:69.14:931,69,0	0/0:36,0:36:99:0,108,1877	0/0:40,0:40:99:0,108,1844	0/0:43,0:43:99:0,114,1993	0/0:30,0:30:75.24:0,75,1274	0/0:14,0:14:42.13:0,42,704	0/0:20,0:20:54.18:0,54,891	0/0:29,0:29:78.25:0,78,1314	0/0:27,0:27:69.24:0,69,1185	0/0:41,0:41:99:0,114,1984	1/1:1,19:20:51.16:678,51,0	1/1:3,16:19:39.13:526,39,0	1/1:5,30:35:66.20:893,66,0	0/0:31,0:31:87.30:0,87,1518	0/0:27,0:26:66.22:0,66,1121	0/0:36,0:36:99:0,99,1700	0/0:25,0:25:66.23:0,66,1140
chr10	101123003	.	CCCCTCTCTCTCTCTCTCTCTCTCT	C	6164.30	PASS	AB=0.988;AC=20;AF=0.370;AN=54;BaseQRankSum=5.190;DP=451;FS=4.860;HRun=0;HaplotypeScore=234.0331;InbreedingCoeff=0.6673;MQ=70.28;MQ0=33;MQRankSum=-6.612;QD=35.02;ReadPosRankSum=1.543;VQSLOD=3.4191;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:11:29.87:0,30,447	1/1:6,0:6:18.05:287,18,0	0/0:32,0:21:36.54:0,37,539	0/0:46,0:22:51.73:0,52,677	0/0:20,0:19:54.15:0,54,1138	0/0:17,0:15:39.02:0,39,560	0/0:12,0:12:36.10:0,36,823	1/1:21,0:20:54.16:800,54,0	0/0:8,0:7:18.04:0,18,345	0/0:21,0:21:60.08:0,60,1383	0/0:16,0:16:48.16:0,48,1165	0/1:7,0:7:15.48:41,0,15	0/0:16,0:15:38.87:0,39,793	0/0:8,0:7:21.04:0,21,292	1/1:13,0:13:36.03:564,36,0	1/1:17,3:17:48.14:951,48,0	0/0:16,0:15:35.18:0,35,767	0/0:6,0:6:18.05:0,18,326	1/1:9,0:8:24.03:597,24,0	1/1:20,0:19:35.49:450,35,0	./.	0/1:8,0:8:34.41:34,0,59	0/0:10,0:9:5.30:0,5,49	0/1:19,0:17:13.72:18,0,14	0/0:20,0:18:51.12:0,51,906	0/1:18,1:19:42.87:988,0,43	1/1:21,0:21:51.08:922,51,0	1/1:12,1:11:21.06:511,21,0
chr10	101123080	.	CTCTCTCTGTGTGTGTGTG	C	4925.63	PASS	AB=1.000;AC=19;AF=0.396;AN=48;BaseQRankSum=7.434;DP=403;FS=1.375;HRun=0;HaplotypeScore=147.7079;InbreedingCoeff=0.7555;MQ=38.38;MQ0=34;MQRankSum=-8.106;QD=31.78;ReadPosRankSum=2.833;VQSLOD=3.7874;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:16:14.63:0,15,487	1/1:2,6:6:6.02:286,6,0	./.	0/0:10,0:4:9.03:0,9,407	0/0:15,0:14:24.08:0,24,1049	0/0:26,0:24:32.79:0,33,1617	0/0:14,0:9:3.90:0,4,126	1/1:23,0:19:29.61:769,30,0	0/0:14,0:11:24.01:0,24,1129	0/0:16,0:13:32:0,32,1010	0/0:15,0:14:30.10:0,30,1261	1/1:9,0:9:3.01:52,3,0	0/0:5,0:5:6.02:0,6,199	0/0:17,0:15:27.05:0,27,950	1/1:5,13:16:9.03:389,9,0	0/0:16,0:15:6.02:0,6,92	0/0:15,0:13:31.55:0,32,884	0/0:13,0:11:29.76:0,30,878	1/1:17,1:15:29.03:859,29,0	1/1:18,0:18:3.01:120,3,0	./.	0/1:11,0:10:0:0,0,0	./.	0/0:15,0:12:2.51:0,3,6	./.	1/1:25,0:24:38.19:1466,38,0	1/1:15,3:17:29.89:945,30,0	1/1:7,0:4:3.01:41,3,0
chr10	101123082	.	CTCTCTG	C	1966.76	PASS	AB=1.000;AC=37;AF=0.740;AN=50;BaseQRankSum=1.572;DP=409;FS=2.922;HRun=0;HaplotypeScore=109.6852;InbreedingCoeff=0.0964;MQ=38.74;MQ0=34;MQRankSum=-0.377;QD=5.84;ReadPosRankSum=-0.126;VQSLOD=1.5080;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:15:14.93:115,15,0	1/1:8,0:6:6.01:60,6,0	./.	0/0:12,0:5:5.38:0,5,75	0/1:15,0:14:12.53:89,0,13	0/1:26,0:24:23.21:173,0,23	1/1:13,0:8:2.43:23,2,0	1/1:22,0:19:21.79:111,22,0	0/0:15,0:12:23.92:0,24,207	0/1:17,0:14:63.23:94,0,63	1/1:16,0:14:23.09:172,23,0	1/1:9,0:9:2.92:17,3,0	1/1:5,0:5:4.74:47,5,0	0/1:17,0:15:6.28:123,0,6	1/1:18,0:16:8.88:66,9,0	1/1:16,0:15:2.51:21,3,0	0/1:15,0:13:31.51:84,0,32	0/1:13,0:11:21.46:91,0,21	1/1:18,0:15:27.75:186,28,0	1/1:18,0:18:3:27,3,0	./.	0/0:11,0:10:0:0,0,0	0/1:6,0:6:0.02:0,0,0	1/1:15,0:12:1.50:5,2,0	./.	1/1:26,0:25:50.24:347,50,0	1/1:18,0:17:29.52:229,30,0	1/1:7,0:4:2.99:24,3,0
chr10	101123086	.	CTGTGTGTGTGTG	C	3977.23	PASS	AB=0.545;AC=17;AF=0.354;AN=48;BaseQRankSum=7.251;DP=424;FS=2.450;HRun=0;HaplotypeScore=126.6678;InbreedingCoeff=0.7551;MQ=40.13;MQ0=33;MQRankSum=-5.949;QD=26.69;ReadPosRankSum=2.238;VQSLOD=3.1017;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:16:14.63:0,15,473	1/1:8,0:6:6.02:210,6,0	0/0:8,0:1:3.01:0,3,136	0/0:13,0:5:12.04:0,12,584	0/0:15,0:14:27.09:0,27,1029	0/0:26,0:24:45.15:0,45,1557	0/0:13,0:8:3.90:0,4,119	1/1:15,10:22:29.90:805,30,0	0/0:15,0:12:27.09:0,27,1347	0/0:17,0:14:27.09:0,27,933	0/0:19,0:17:39.13:0,39,1390	1/1:5,0:10:3.01:70,3,0	0/0:6,0:6:9.03:0,9,300	0/0:17,0:16:30.04:0,30,943	1/1:18,0:16:9.03:314,9,0	0/0:8,0:15:5.60:0,6,84	0/0:15,0:15:25.22:0,25,759	0/0:13,0:11:21.07:0,21,754	1/1:14,4:15:18.06:630,18,0	1/1:5,15:20:3.01:100,3,0	./.	./.	0/1:1,0:6:0:0,0,0	0/0:12,0:11:2.04:0,2,6	./.	1/1:15,11:25:36.06:1121,36,0	1/1:14,4:17:21.07:728,21,0	./.
chr10	101123868	.	TCCTTAATAGAGTAG	T	1429.83	PASS	AB=1.000;AC=14;AF=0.259;AN=54;BaseQRankSum=14.126;DP=689;FS=6.336;HRun=0;HaplotypeScore=279.5648;InbreedingCoeff=0.2103;MQ=55.91;MQ0=8;MQRankSum=-2.142;QD=6.08;ReadPosRankSum=-6.009;VQSLOD=0.5386;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1385	0/1:12,0:12:65.98:165,0,66	0/0:27,0:18:53.65:0,54,443	0/0:17,0:11:26.25:0,26,238	0/0:38,0:38:99:0,114,995	0/0:19,0:19:56.88:0,57,510	0/0:21,0:21:62.90:0,63,527	0/0:41,0:40:99:0,120,1019	0/0:21,0:21:63.02:0,63,763	0/0:31,0:31:90.09:0,90,1086	0/0:26,0:25:68.91:0,69,652	1/1:18,0:18:52.89:320,53,0	0/0:23,0:23:68.48:0,68,643	0/0:24,0:24:68.92:0,69,656	0/1:25,0:24:99:110,0,350	0/1:24,0:23:85.70:86,0,423	0/0:23,0:23:68.93:0,69,653	0/0:14,0:14:40.20:0,40,461	0/0:33,0:23:4.53:0,5,462	0/1:40,0:36:99:220,0,430	0/1:23,0:23:54.08:54,0,405	1/1:18,0:18:49.84:295,50,0	./.	1/1:7,0:7:17.12:98,17,0	0/0:43,0:43:99:0,129,1156	0/1:36,0:36:83.69:84,0,671	0/1:26,0:26:95.94:96,0,400	0/1:6,0:6:31.04:74,0,31
chr10	101125331	.	CAGACAGAG	C	3404.21	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.805;DP=762;FS=9.253;HRun=0;HaplotypeScore=223.9498;InbreedingCoeff=0.9815;MQ=76.12;MQ0=0;MQRankSum=-9.214;QD=57.70;ReadPosRankSum=1.087;VQSLOD=2.2388;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,153,5628	0/0:11,0:11:30.10:0,30,1154	0/0:34,0:33:72.01:0,72,2014	0/0:35,0:34:75.87:0,76,2194	0/0:28,0:28:72.25:0,72,2951	0/0:18,0:18:54.19:0,54,2067	0/0:23,0:23:63.20:0,63,2255	0/0:33,0:33:93.31:0,93,3382	0/0:30,0:30:81.26:0,81,3087	0/0:34,0:34:93.31:0,93,3510	0/0:18,0:18:54.19:0,54,2265	1/1:4,18:22:60.20:1550,60,0	0/0:42,0:42:99:0,111,4370	0/0:34,0:34:96.31:0,96,3544	0/0:43,0:43:99:0,126,4924	0/0:40,0:40:99:0,111,4534	0/0:38,0:38:99:0,105,4166	0/0:25,0:25:69.20:0,69,2690	0/0:14,0:14:36.08:0,36,1427	0/0:18,0:18:48.15:0,48,1973	0/0:36,0:36:99:0,99,3757	1/1:3,11:14:33.11:895,33,0	1/1:1,12:13:30.06:750,30,0	1/1:4,6:10:8.89:210,9,0	0/0:14,0:14:33.11:0,33,1388	0/0:40,0:40:99:0,117,4427	0/0:32,0:32:87.30:0,87,3345	0/0:7,0:7:21.07:0,21,883
chr10	101125384	.	GA	G	1471.29	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.801;DP=681;FS=9.621;HRun=2;HaplotypeScore=116.6660;InbreedingCoeff=0.9937;MQ=61.18;MQ0=0;MQRankSum=-10.700;QD=24.94;ReadPosRankSum=0.970;VQSLOD=2.5070;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,1958	0/0:17,0:17:51.16:0,51,741	0/0:25,0:22:66.18:0,66,913	0/0:31,0:31:86.32:0,86,1233	0/0:25,0:25:72.22:0,72,1038	0/0:19,0:19:57.17:0,57,815	0/0:23,0:23:69.19:0,69,961	0/0:33,0:33:90.30:0,90,1331	0/0:19,0:19:54.18:0,54,809	0/0:23,0:23:69.23:0,69,1028	0/0:13,0:13:36.12:0,36,538	1/1:1,19:20:57.19:737,57,0	0/0:42,0:42:99:0,123,1835	0/0:32,0:32:96.30:0,96,1399	0/0:33,0:33:99:0,99,1482	0/0:31,0:31:93.29:0,93,1354	0/0:32,0:31:96.28:0,96,1392	0/0:27,0:27:81.27:0,81,1214	0/0:18,0:18:51.17:0,51,762	0/0:26,0:26:78.24:0,78,1118	0/0:27,0:27:81.27:0,81,1211	1/1:0,12:12:15.05:194,15,0	1/1:1,14:15:33.11:427,33,0	1/1:2,10:12:21.06:272,21,0	0/0:16,0:16:45.15:0,45,671	0/0:29,0:29:87.29:0,87,1303	0/0:28,0:28:84.27:0,84,1238	0/0:8,0:8:24.08:0,24,360
chr10	101125676	.	C	CAGAGTCCACAGCA	6445.28	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.223;DP=502;FS=15.161;HRun=0;HaplotypeScore=197.2892;InbreedingCoeff=0.9920;MQ=72.97;MQ0=0;MQRankSum=-10.283;QD=111.13;ReadPosRankSum=-1.936;VQSLOD=3.5621;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,4046	0/0:9,0:9:27.09:0,27,987	0/0:26,0:26:63.21:0,63,2078	0/0:17,0:17:45.15:0,45,1362	0/0:13,0:13:39.12:0,39,1400	0/0:10,0:10:27.09:0,27,990	0/0:28,0:28:75.24:0,75,2602	0/0:28,0:28:84.29:0,84,3211	0/0:15,0:15:45.15:0,45,1629	0/0:14,0:14:39.13:0,39,1545	0/0:10,0:10:27.08:0,27,910	1/1:10,8:20:45.15:2352,45,0	0/0:14,0:14:39.11:0,39,1435	0/0:13,0:13:36.12:0,36,1305	0/0:20,0:20:60.20:0,60,2169	0/0:16,0:16:48.16:0,48,1889	0/0:23,0:23:66.23:0,66,2586	0/0:21,0:21:57.19:0,57,2106	0/0:15,0:15:42.14:0,42,1655	0/0:17,0:17:39.02:0,39,1389	0/0:34,0:34:99:0,99,3738	1/1:5,3:8:15.05:940,15,0	1/1:5,4:9:18.03:1127,18,0	1/1:7,12:21:42.14:2026,42,0	0/0:13,0:13:36.08:0,36,1117	0/0:17,0:17:48.16:0,48,1796	0/0:26,0:25:75.26:0,75,2861	0/0:9,0:9:27.07:0,27,773
chr10	101125775	.	CT	C	1330.62	PASS	AB=0.923;AC=10;AF=0.179;AN=56;BaseQRankSum=1.743;DP=583;FS=0.457;HRun=10;HaplotypeScore=96.7395;InbreedingCoeff=0.6976;MQ=75.01;MQ0=0;MQRankSum=-2.055;QD=12.32;ReadPosRankSum=-0.718;VQSLOD=3.3004;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,123,1354	0/0:10,0:10:5.32:0,5,111	0/0:14,0:14:23.63:0,24,224	0/0:14,0:14:31.59:0,32,306	0/0:25,0:26:66.15:0,66,719	0/0:18,0:18:51.12:0,51,555	0/0:24,1:25:31.10:0,31,571	0/0:38,0:38:27.39:0,27,283	0/0:18,0:18:48.13:0,48,531	0/0:19,1:20:25.07:0,25,499	0/0:11,1:12:7.02:0,7,292	1/1:3,12:15:32.97:286,33,0	0/0:17,0:17:42.05:0,42,433	0/0:18,0:18:54.14:0,54,590	0/0:22,0:22:34.58:0,35,245	0/0:19,1:20:31.08:0,31,556	0/0:26,0:26:72.17:0,72,779	0/1:8,2:11:22.15:22,0,217	0/0:23,0:23:30.49:0,30,230	0/0:14,0:14:31.76:0,32,174	0/0:18,0:18:24.18:0,24,200	1/1:4,16:20:38.97:338,39,0	1/1:0,20:20:47.99:417,48,0	1/1:1,19:20:47.99:417,48,0	0/0:16,0:16:42.11:0,42,464	0/1:22,0:22:18.33:18,0,185	0/0:33,1:34:69.51:0,70,472	0/0:18,0:18:5.81:0,6,167
chr10	101126128	.	T	TTA	1366.59	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.311;DP=508;FS=15.576;HRun=0;HaplotypeScore=81.3113;InbreedingCoeff=0.9725;MQ=63.16;MQ0=0;MQRankSum=-3.764;QD=27.89;ReadPosRankSum=0.704;VQSLOD=4.0857;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.12:0,54,645	0/0:9,0:9:27.09:0,27,350	0/0:10,0:9:11.74:0,12,224	0/0:13,0:11:15.03:0,15,170	0/0:37,0:37:99:0,105,1320	0/0:14,0:14:33.09:0,33,414	0/0:15,0:15:42.09:0,42,500	0/0:45,0:45:99:0,105,1325	0/0:11,0:11:30.06:0,30,359	0/0:30,0:30:81.23:0,81,997	0/0:24,0:24:72.19:0,72,891	1/1:1,6:7:15.05:240,15,0	0/0:11,0:11:33.09:0,33,414	0/0:12,0:12:33.09:0,33,415	0/0:14,0:14:39.07:0,39,460	0/0:20,0:20:48.14:0,48,609	0/0:18,0:18:41.96:0,42,469	0/0:19,0:19:42.08:0,42,511	0/0:17,0:17:44.91:0,45,472	0/0:24,0:24:57.12:0,57,694	0/0:13,0:13:36.09:0,36,440	1/1:4,9:13:30.10:506,30,0	1/1:11,11:22:39.11:599,39,0	1/1:3,4:7:12.03:178,12,0	0/0:15,0:15:42.12:0,42,531	0/0:23,0:23:63.19:0,63,795	0/0:27,0:27:81.23:0,81,1019	0/0:15,0:15:42.10:0,42,514
chr10	101126159	.	T	TG	365.93	PASS	AB=0.600;AC=7;AF=0.125;AN=56;BaseQRankSum=8.357;DP=472;FS=17.642;HRun=0;HaplotypeScore=68.7547;InbreedingCoeff=0.7765;MQ=63.99;MQ0=0;MQRankSum=-5.608;QD=9.89;ReadPosRankSum=-1.960;VQSLOD=2.0294;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.15:0,48,653	0/0:9,0:9:27.08:0,27,363	0/0:7,0:7:21.07:0,21,270	0/0:11,0:9:11.21:0,11,130	0/0:42,0:42:99:0,117,1604	0/0:11,0:11:33.08:0,33,425	0/0:12,0:12:36.12:0,36,503	0/0:43,0:43:99:0,123,1707	0/0:9,0:9:27.09:0,27,378	0/0:33,0:33:96.31:0,96,1301	0/0:26,0:26:78.24:0,78,1059	0/1:4,8:12:10.04:139,0,10	0/0:17,0:17:51.17:0,51,713	0/0:15,0:15:45.15:0,45,629	0/0:14,0:14:42.14:0,42,587	0/0:16,0:16:48.16:0,48,671	0/0:19,0:19:54.17:0,54,738	0/0:18,0:18:48.15:0,48,654	0/0:14,0:14:42.14:0,42,586	0/0:19,0:19:57.19:0,57,797	0/0:11,0:11:33.11:0,33,460	1/1:4,6:10:23.85:179,24,0	1/1:1,10:11:20.91:162,21,0	1/1:0,4:4:2.99:24,3,0	0/0:19,0:18:57.19:0,57,797	0/0:15,0:15:45.14:0,45,612	0/0:25,0:25:75.21:0,75,994	0/0:13,0:13:39.13:0,39,545
chr10	101126160	.	T	TA	344.24	PASS	AB=0.625;AC=7;AF=0.125;AN=56;BaseQRankSum=8.201;DP=469;FS=8.689;HRun=0;HaplotypeScore=67.8697;InbreedingCoeff=0.7481;MQ=64.02;MQ0=0;MQRankSum=-5.668;QD=9.56;ReadPosRankSum=-1.622;VQSLOD=2.7998;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.15:0,45,629	0/0:8,0:8:24.08:0,24,336	0/0:7,0:7:20.98:0,21,247	0/0:11,0:9:7.90:0,8,126	0/0:42,0:42:99:0,120,1631	0/0:11,0:11:33.10:0,33,442	0/0:12,0:12:36.12:0,36,504	0/0:44,0:44:99:0,129,1760	0/0:9,0:9:27.09:0,27,378	0/0:32,0:32:96.29:0,96,1295	0/0:26,0:26:75.24:0,75,1033	1/1:4,8:12:30.80:240,31,0	0/0:17,0:17:51.17:0,51,713	0/0:15,0:15:45.15:0,45,629	0/0:14,0:14:42.14:0,42,587	0/0:16,0:16:48.16:0,48,671	0/0:19,0:19:54.17:0,54,737	0/0:17,0:17:48.14:0,48,653	0/0:14,0:14:42.14:0,42,587	0/0:20,0:20:57.19:0,57,797	0/0:11,0:11:33.11:0,33,461	0/1:4,6:10:37.42:79,0,37	1/1:0,10:10:17.92:138,18,0	1/1:0,4:4:2.99:24,3,0	0/0:19,0:18:57.19:0,57,797	0/0:16,0:16:45.14:0,45,615	0/0:24,0:24:69.22:0,69,950	0/0:13,0:13:39.13:0,39,545
chr10	101126197	.	AT	A	1038.35	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.088;DP=497;FS=5.747;HRun=1;HaplotypeScore=60.8771;InbreedingCoeff=0.9853;MQ=74.98;MQ0=0;MQRankSum=-6.145;QD=26.62;ReadPosRankSum=-0.960;VQSLOD=2.9887;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.17:0,63,925	0/0:8,0:8:24.08:0,24,367	0/0:13,0:13:38.91:0,39,537	0/0:9,0:9:24.08:0,24,359	0/0:32,0:32:96.31:0,96,1445	0/0:12,0:12:36.08:0,36,525	0/0:17,0:17:51.16:0,51,758	0/0:30,0:30:90.26:0,90,1281	0/0:12,0:12:36.12:0,36,544	0/0:33,0:33:99:0,99,1479	0/0:25,0:25:75.21:0,75,1081	1/1:1,14:15:42.03:533,42,0	0/0:18,0:18:54.18:0,54,824	0/0:14,0:14:42.14:0,42,639	0/0:17,0:17:51.16:0,51,760	0/0:16,0:16:48.16:0,48,732	0/0:19,0:19:57.17:0,57,839	0/0:24,0:24:69.15:0,69,972	0/0:19,0:19:57.19:0,57,873	0/0:18,0:18:54.10:0,54,776	0/0:16,0:16:48.16:0,48,735	1/1:0,6:6:15.01:187,15,0	1/1:0,14:14:26.97:307,27,0	1/1:0,4:4:12.04:167,12,0	0/0:20,0:19:60.20:0,60,917	0/0:20,0:20:60.20:0,60,918	0/0:28,0:28:84.25:0,84,1239	0/0:15,0:15:45.14:0,45,667
chr10	101126583	.	CCAAT	C	176.93	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=3.816;DP=463;FS=0.000;HRun=0;HaplotypeScore=84.0117;InbreedingCoeff=0.7978;MQ=86.87;MQ0=0;MQRankSum=-2.740;QD=12.64;ReadPosRankSum=0.509;VQSLOD=2.9816;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.21:0,66,1750	0/0:7,0:7:21:0,21,505	0/0:18,0:18:52.41:0,52,1238	0/0:15,0:15:34.65:0,35,783	0/0:20,0:20:57.18:0,57,1470	0/0:25,0:25:75.26:0,75,1967	0/0:20,0:20:57.20:0,57,1550	0/0:35,0:35:99:0,105,2749	0/0:10,0:10:30.10:0,30,770	0/0:19,0:19:57.20:0,57,1483	0/0:17,0:17:51.18:0,51,1317	1/1:0,3:3:3.01:58,3,0	0/0:19,0:19:57.20:0,57,1523	0/0:11,0:11:33.11:0,33,893	0/0:15,0:15:45.15:0,45,1220	0/0:18,0:18:54.19:0,54,1479	0/0:2,0:2:6.02:0,6,164	0/0:11,0:11:33.11:0,33,765	0/0:22,0:22:63.22:0,63,1712	0/0:18,0:18:51.08:0,51,1268	0/0:36,0:36:99:0,102,2699	1/1:0,4:4:9.03:174,9,0	1/1:1,6:7:3.01:58,3,0	./.	0/0:18,0:18:54.16:0,54,1410	0/0:20,0:20:60.21:0,60,1636	0/0:27,0:27:81.27:0,81,2123	0/0:21,0:21:60.21:0,60,1609
chr10	101126716	.	TATTAA	T	4422.20	PASS	AB=1.000;AC=21;AF=0.389;AN=54;BaseQRankSum=7.686;DP=373;FS=0.521;HRun=0;HaplotypeScore=75.4612;InbreedingCoeff=0.8446;MQ=88.08;MQ0=0;MQRankSum=-3.570;QD=25.13;ReadPosRankSum=0.256;VQSLOD=4.4961;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:30.08:0,30,800	1/1:2,4:6:9.03:169,9,0	0/1:17,0:11:5.16:5,0,138	0/0:26,0:25:26.60:0,27,393	0/0:13,0:13:21.07:0,21,577	0/0:19,0:18:42.14:0,42,1181	0/0:9,0:9:15.05:0,15,387	1/1:19,13:32:39.09:674,39,0	0/0:6,0:6:12.04:0,12,330	0/0:19,0:19:42.14:0,42,1197	0/0:13,0:13:18.06:0,18,518	0/0:6,0:6:8.87:0,9,57	0/0:8,0:8:18.06:0,18,500	0/0:10,0:10:24.08:0,24,691	1/1:5,6:11:12.04:226,12,0	1/1:5,11:16:27.09:508,27,0	0/0:12,0:12:33.11:0,33,871	0/0:18,0:18:36.10:0,36,904	1/1:7,8:15:24.05:387,24,0	1/1:6,11:17:30.10:565,30,0	1/1:4,2:6:3.01:56,3,0	./.	0/0:6,0:6:8.81:0,9,54	0/0:2,0:2:2.96:0,3,19	0/0:13,0:13:30.10:0,30,850	1/1:8,12:20:39.12:701,39,0	1/1:7,19:26:42.14:790,42,0	1/1:1,9:10:18.06:339,18,0
chr10	101126925	.	TCATCACCACCAC	T	9069.08	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=11.527;DP=488;FS=8.680;HRun=0;HaplotypeScore=183.2554;InbreedingCoeff=0.9630;MQ=72.60;MQ0=2;MQRankSum=-6.021;QD=55.30;ReadPosRankSum=0.069;VQSLOD=3.9400;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.10:0,42,2011	1/1:0,8:8:15.05:568,15,0	0/0:24,0:17:36.88:0,37,1154	0/0:30,0:22:39.52:0,40,1182	0/0:20,0:20:57.15:0,57,2415	0/0:19,0:19:57.14:0,57,2615	0/0:16,0:16:48.14:0,48,2073	1/1:2,17:19:46.99:986,47,0	0/0:22,0:22:66.21:0,66,3484	0/0:16,0:16:48.13:0,48,1982	0/0:14,0:14:42.12:0,42,1943	0/0:0,0:18:33.01:0,33,336	0/0:20,0:20:60.18:0,60,3372	0/0:20,0:20:54.14:0,54,2588	1/1:0,18:18:30.10:1059,30,0	1/1:1,16:17:26.85:1022,27,0	0/0:21,0:22:55.14:0,55,2488	0/0:25,0:25:69.14:0,69,3392	1/1:1,13:13:38.87:836,39,0	1/1:1,24:25:53.56:1266,54,0	1/1:11,0:11:8.96:120,9,0	0/0:0,0:8:20.98:0,21,192	0/0:4,0:9:5.94:0,6,167	0/0:0,0:7:12.02:0,12,127	0/0:18,0:18:51.13:0,51,2267	1/1:1,20:21:57.10:1169,57,0	1/1:0,23:23:41.74:1589,42,0	1/1:0,8:8:12.04:454,12,0
chr10	101127066	.	TTTA	T	4297.84	PASS	AB=0.682;AC=17;AF=0.304;AN=56;BaseQRankSum=16.412;DP=590;FS=10.192;HRun=0;HaplotypeScore=130.3608;InbreedingCoeff=0.7312;MQ=78.56;MQ0=0;MQRankSum=-15.746;QD=23.49;ReadPosRankSum=2.330;VQSLOD=4.6014;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.22:0,69,1547	1/1:1,9:10:9.08:263,9,0	0/0:18,0:18:23.28:0,23,1078	0/0:21,0:21:58.44:0,58,1253	0/0:35,0:35:99:0,105,2432	0/0:23,0:23:69.24:0,69,1629	0/0:20,0:20:57.15:0,57,1267	1/1:7,13:20:33.05:522,33,0	0/0:19,0:19:57.20:0,57,1320	0/0:26,0:26:75.23:0,75,1626	0/0:21,0:21:63.22:0,63,1440	0/0:33,0:33:96.33:0,96,2239	0/0:29,0:29:87.30:0,87,2041	0/0:20,0:20:60.19:0,60,1349	1/1:4,12:16:18.95:347,19,0	1/1:4,12:16:30.98:438,31,0	0/0:25,0:25:69.24:0,69,1552	0/0:22,0:22:60.21:0,60,1389	0/1:16,6:22:99:240,0,102	1/1:5,17:22:41.70:508,42,0	0/1:8,6:14:16.69:158,0,17	0/0:15,0:15:42.14:0,42,948	0/0:17,0:17:48.16:0,48,1029	0/0:18,0:18:51.18:0,51,1190	0/0:21,0:21:60.20:0,60,1362	0/1:7,25:32:30.48:816,0,30	1/1:3,24:27:80.97:872,81,0	1/1:0,4:4:12.03:135,12,0
chr10	101127071	.	CA	C	2399.80	PASS	AB=0.642;AC=17;AF=0.304;AN=56;BaseQRankSum=17.106;DP=577;FS=11.337;HRun=2;HaplotypeScore=110.5324;InbreedingCoeff=0.7620;MQ=78.29;MQ0=0;MQRankSum=-15.641;QD=14.03;ReadPosRankSum=3.121;VQSLOD=2.1528;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.18:0,66,964	0/1:1,9:10:2.98:158,0,3	0/0:16,0:16:24.20:0,24,629	0/0:22,0:22:63.20:0,63,911	0/0:36,0:36:99:0,108,1613	0/0:24,0:24:72.24:0,72,1078	0/0:17,0:17:51.17:0,51,765	1/1:4,13:17:16.95:296,17,0	0/0:19,0:19:54.17:0,54,788	0/0:23,0:23:69.22:0,69,1004	0/0:25,0:25:75.25:0,75,1120	0/0:34,0:34:99:0,102,1465	0/0:32,0:32:93.32:0,93,1394	0/0:22,0:22:66.22:0,66,987	1/1:1,14:15:8.80:240,9,0	1/1:2,13:15:41.47:288,41,0	0/0:24,0:24:69.23:0,69,1034	0/0:22,0:22:60.17:0,60,875	0/1:12,6:18:95.91:96,0,112	1/1:2,19:21:27.07:291,27,0	0/1:6,7:13:12.94:136,0,13	0/0:16,0:16:42.14:0,42,629	0/0:16,0:16:48.12:0,48,694	0/0:18,0:18:51.17:0,51,764	0/0:18,0:18:54.18:0,54,807	1/1:3,27:30:18.64:481,19,0	1/1:4,24:28:76.55:533,77,0	1/1:0,4:4:11.85:79,12,0
chr10	101129308	.	AC	A	418.11	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.802;DP=610;FS=0.000;HRun=1;HaplotypeScore=108.3329;InbreedingCoeff=0.9849;MQ=57.30;MQ0=11;MQRankSum=-1.004;QD=7.89;ReadPosRankSum=-0.406;VQSLOD=0.4441;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:31:22.95:0,23,553	0/0:9,0:9:26.21:0,26,283	0/0:28,0:15:23.62:0,24,373	0/0:51,0:17:31.96:0,32,385	0/0:28,0:28:84.16:0,84,1078	0/0:17,0:17:51.17:0,51,709	0/0:15,0:15:26.46:0,26,532	0/0:38,0:36:98.88:0,99,1009	0/0:17,0:17:51.16:0,51,692	0/0:27,0:27:81.26:0,81,1102	0/0:21,0:21:63.16:0,63,824	1/1:12,1:13:25.24:140,25,0	0/0:26,0:26:78.21:0,78,1027	0/0:20,0:20:50.29:0,50,782	0/0:24,0:24:71:0,71,720	0/0:20,0:20:57.82:0,58,610	0/0:19,0:19:54.15:0,54,724	0/0:18,0:18:48.63:0,49,670	0/0:20,0:19:50.04:0,50,469	0/0:19,0:19:55.86:0,56,641	0/0:11,0:11:24.31:0,24,237	1/1:10,2:12:23.77:179,24,0	1/1:20,2:22:37.90:206,38,0	1/1:6,0:6:10.81:50,11,0	0/0:21,0:21:63.16:0,63,839	0/0:28,0:28:80.58:0,81,918	0/0:38,0:37:99:0,108,1056	0/0:11,0:11:32.39:0,32,364
chr10	101129313	.	A	AC	1394.26	PASS	AB=0.848;AC=9;AF=0.161;AN=56;BaseQRankSum=10.498;DP=600;FS=3.169;HRun=0;HaplotypeScore=103.8104;InbreedingCoeff=-0.1957;MQ=58.60;MQ0=10;MQRankSum=-6.643;QD=7.34;ReadPosRankSum=-0.454;VQSLOD=3.1566;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:17.83:0,18,365	0/1:5,3:9:99:132,0,176	0/0:25,1:14:36.56:0,37,431	0/0:51,0:19:41.20:0,41,532	0/0:25,0:25:75.24:0,75,1030	0/0:18,0:18:54.17:0,54,740	0/0:16,0:16:45.04:0,45,581	0/1:28,2:34:99:138,0,831	0/0:18,0:18:54.16:0,54,724	0/0:28,0:28:84.27:0,84,1145	0/0:21,0:21:63.06:0,63,822	0/0:12,0:12:21.16:0,21,91	0/0:26,0:26:78.23:0,78,1038	0/0:20,0:20:60.11:0,60,811	0/1:17,4:22:99:211,0,389	0/0:18,1:21:17.31:0,17,464	0/0:18,0:18:54.18:0,54,746	0/0:19,0:19:54.10:0,54,713	0/1:12,1:12:33.08:33,0,344	0/1:19,2:22:66.60:67,0,559	0/1:7,2:10:99:100,0,148	0/0:13,0:13:15.06:0,15,120	0/0:21,0:21:38.77:0,39,216	0/0:6,0:6:9.56:0,10,32	0/0:22,0:22:66.21:0,66,908	0/1:21,5:27:99:179,0,665	0/1:20,15:37:99:622,0,565	0/1:11,2:13:54.57:55,0,309
chr10	101129315	.	A	AAAC	1964.34	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=12.615;DP=601;FS=11.228;HRun=0;HaplotypeScore=124.5086;InbreedingCoeff=0.5507;MQ=61.23;MQ0=9;MQRankSum=-5.463;QD=13.10;ReadPosRankSum=-0.307;VQSLOD=2.5343;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:11.06:11,0,398	0/0:9,0:9:8.10:0,8,234	0/0:27,0:16:25.91:0,26,497	0/0:51,0:20:29.63:0,30,551	0/0:26,0:26:78.20:0,78,1260	0/0:18,0:18:54.17:0,54,906	0/0:15,0:15:44.34:0,44,679	0/0:36,0:34:66.84:0,67,1187	0/0:18,0:18:54.16:0,54,866	0/0:28,0:28:84.26:0,84,1374	0/0:19,0:19:54.18:0,54,901	1/1:1,10:12:24.08:539,24,0	0/0:25,0:25:75.23:0,75,1228	0/0:20,0:20:60.18:0,60,952	0/1:21,0:21:37.80:38,0,499	0/0:22,0:22:3.04:0,3,625	0/0:19,0:19:57.17:0,57,928	0/0:18,0:19:53.99:0,54,865	0/0:13,0:13:34.53:0,35,486	0/0:22,0:22:11.16:0,11,706	0/1:10,0:10:14.42:14,0,246	1/1:3,6:13:30.05:531,30,0	1/1:4,16:21:38.69:768,39,0	1/1:0,5:6:12.04:230,12,0	0/0:22,0:22:66.21:0,66,1090	0/0:27,0:27:32.02:0,32,882	0/1:38,0:38:0.69:1,0,794	0/0:13,0:13:5.10:0,5,382
chr10	101129357	.	A	ATT	5809.40	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-11.111;DP=502;FS=7.873;HRun=8;HaplotypeScore=67.6175;InbreedingCoeff=0.9843;MQ=77.38;MQ0=0;MQRankSum=-3.662;QD=33.01;ReadPosRankSum=-0.693;VQSLOD=4.3378;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:54.10:0,54,587	1/1:2,5:7:15.05:238,15,0	0/0:16,0:16:29.39:0,29,326	0/0:12,0:12:16.10:0,16,169	0/0:27,0:27:72.16:0,72,793	0/0:18,0:18:51.14:0,51,568	0/0:15,0:15:42.11:0,42,468	1/1:8,17:27:53.65:794,54,0	0/0:22,0:22:66.18:0,66,735	0/0:21,0:21:57.15:0,57,635	0/0:19,0:19:57.14:0,57,627	0/0:12,0:12:27.03:0,27,288	0/0:21,0:21:57.15:0,57,635	0/0:15,0:15:45.12:0,45,502	1/1:3,8:13:27.08:391,27,0	1/1:5,17:22:45.15:714,45,0	0/0:25,0:25:66.16:0,66,736	0/0:19,0:19:51.12:0,51,569	1/1:5,10:15:33.08:497,33,0	1/1:4,19:26:62.66:922,63,0	1/1:1,6:7:18.02:258,18,0	0/0:16,0:16:39.10:0,39,435	0/0:21,0:21:35.97:0,36,401	0/0:4,0:4:9.02:0,9,100	0/0:20,0:20:51.12:0,51,568	1/1:5,18:23:57.19:900,57,0	1/1:8,19:27:51.17:809,51,0	1/1:3,6:9:18.06:286,18,0
chr10	101129476	.	A	AAC	1788.92	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.025;DP=423;FS=13.819;HRun=0;HaplotypeScore=56.4300;InbreedingCoeff=0.9756;MQ=69.40;MQ0=0;MQRankSum=-0.946;QD=47.08;ReadPosRankSum=0.314;VQSLOD=3.5591;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:38.83:0,39,488	0/0:3,0:3:9.03:0,9,128	0/0:7,0:7:20.80:0,21,225	0/0:10,0:10:18.22:0,18,203	0/0:20,0:20:60.18:0,60,837	0/0:21,0:21:37.37:0,37,792	0/0:7,0:7:21.06:0,21,277	0/0:19,0:19:57.11:0,57,736	0/0:20,0:20:60.19:0,60,838	0/0:28,0:28:84.27:0,84,1183	0/0:24,0:24:72.23:0,72,1001	1/1:2,12:14:42.05:707,42,0	0/0:22,0:22:66.16:0,66,867	0/0:17,0:17:51.16:0,51,710	0/0:13,0:13:39.09:0,39,514	0/0:22,0:22:63.19:0,63,854	0/0:14,0:14:42.13:0,42,581	0/0:11,0:11:30.01:0,30,402	0/0:9,0:9:27.07:0,27,353	0/0:18,0:18:54.17:0,54,751	0/0:9,0:9:27.09:0,27,379	1/1:0,8:9:24.08:443,24,0	1/1:0,8:9:27.09:494,27,0	1/1:1,5:6:18.04:303,18,0	0/0:15,0:15:45.11:0,45,604	0/0:27,0:27:78.24:0,78,1066	0/0:25,0:25:75.23:0,75,1033	0/0:11,0:11:33.09:0,33,451
chr10	101129767	.	TA	T	5222.32	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=12.703;DP=412;FS=3.273;HRun=7;HaplotypeScore=51.4353;InbreedingCoeff=0.8942;MQ=60.77;MQ0=0;MQRankSum=-3.840;QD=26.78;ReadPosRankSum=-0.743;VQSLOD=5.1680;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:24.08:0,24,302	1/1:0,2:2:6.01:61,6,0	0/1:6,0:6:10.27:10,0,81	0/0:2,0:3:7.57:0,8,73	0/0:18,0:18:51.16:0,51,641	0/0:20,0:20:57.18:0,57,716	0/0:7,0:7:21.07:0,21,264	1/1:5,17:22:60.11:602,60,0	0/0:10,0:10:30.07:0,30,350	0/0:22,0:22:60.19:0,60,754	0/0:26,0:26:78.10:0,78,945	1/1:2,11:13:33.07:337,33,0	0/0:12,0:12:33.11:0,33,415	0/0:19,0:19:57.17:0,57,704	1/1:3,17:20:54.12:550,54,0	1/1:1,16:17:51.10:513,51,0	0/0:26,0:26:72.23:0,72,905	0/0:27,0:27:78.25:0,78,981	1/1:3,11:14:36.08:366,36,0	1/1:2,11:13:33.07:336,33,0	1/1:0,2:2:6.01:61,6,0	1/1:0,9:9:27.06:275,27,0	1/1:1,16:17:45.02:459,45,0	1/1:0,12:12:33.08:337,33,0	0/0:17,0:17:51.15:0,51,629	1/1:3,12:15:36.08:367,36,0	1/1:2,19:21:57.13:580,57,0	1/1:0,12:12:36.08:367,36,0
chr10	101129795	.	G	GA	4537.21	PASS	AC=18;AF=0.333;AN=54;BaseQRankSum=6.346;DP=432;FS=4.140;HRun=7;HaplotypeScore=60.4239;InbreedingCoeff=0.9506;MQ=64.37;MQ0=0;MQRankSum=-5.883;QD=31.08;ReadPosRankSum=-2.138;VQSLOD=4.3209;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:30.05:0,30,290	./.	0/0:8,0:8:21.03:0,21,198	0/0:3,0:3:3:0,3,29	0/0:17,0:17:45.07:0,45,435	0/0:20,0:20:51.08:0,51,492	0/0:9,0:9:24.04:0,24,231	1/1:4,25:29:78.23:929,78,0	0/0:17,0:17:51.08:0,51,493	0/0:22,0:22:57.03:0,57,537	0/0:23,0:23:66.11:0,66,637	0/0:12,0:12:33.05:0,33,319	0/0:14,0:14:36.05:0,36,342	0/0:22,0:22:57.09:0,57,550	1/1:1,16:17:48.15:577,48,0	1/1:4,15:19:21.54:509,22,0	0/0:28,0:28:72.10:0,72,693	0/0:23,0:23:57.06:0,57,543	1/1:2,16:18:48.15:580,48,0	1/1:1,7:8:21.06:250,21,0	1/1:0,2:2:6.02:72,6,0	0/0:8,0:8:21.03:0,21,203	0/0:18,0:18:45.07:0,45,434	0/0:12,0:12:33.05:0,33,319	0/0:19,0:19:48.07:0,48,463	1/1:3,14:17:16.16:478,16,0	1/1:2,22:24:63.15:744,63,0	1/1:1,11:12:33.10:398,33,0
chr10	101130102	.	TTTATTTTTA	T	213.39	PASS	AC=6;AF=0.120;AN=50;BaseQRankSum=2.567;DP=256;FS=1.906;HRun=0;HaplotypeScore=76.3367;InbreedingCoeff=0.5097;MQ=71.02;MQ0=0;MQRankSum=-3.262;QD=16.41;ReadPosRankSum=1.350;VQSLOD=1.5045;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:21.07:0,21,777	0/0:1,0:1:3.01:0,3,138	0/0:11,0:7:8.65:0,9,39	0/0:11,0:7:11.85:0,12,147	0/0:6,0:6:12.04:0,12,456	0/0:11,0:11:21.07:0,21,940	0/0:4,0:4:3.01:0,3,138	0/0:40,0:40:75.24:0,75,2436	0/0:2,0:2:3.01:0,3,77	0/0:5,0:5:6.02:0,6,274	./.	1/1:4,1:5:3.01:84,3,0	0/0:5,0:5:6.02:0,6,227	0/0:8,0:8:9.03:0,9,358	0/0:6,0:6:12.04:0,12,449	0/0:3,0:3:6.02:0,6,157	0/0:22,0:22:51.17:0,51,2235	0/0:15,0:15:36.12:0,36,1336	0/0:18,0:18:30.09:0,30,1049	./.	0/0:6,0:6:15.05:0,15,554	./.	1/1:4,2:6:6.02:168,6,0	1/1:1,1:2:3.01:69,3,0	0/0:10,0:10:24.08:0,24,1053	0/0:5,0:5:9.03:0,9,415	0/0:9,0:9:15.05:0,15,653	0/0:26,0:26:57.19:0,57,2212
chr10	101130159	.	TATAC	T	603.50	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=2.819;DP=256;FS=4.703;HRun=0;HaplotypeScore=66.1705;InbreedingCoeff=0.4186;MQ=73.49;MQ0=0;MQRankSum=-0.895;QD=8.50;ReadPosRankSum=-2.601;VQSLOD=1.3789;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.22:0,69,1771	0/0:3,0:3:3.11:0,3,9	0/0:7,0:6:1.50:0,2,276	0/0:8,0:8:15.04:0,15,227	0/0:11,0:11:33.10:0,33,852	0/0:10,0:10:30.10:0,30,819	0/0:4,0:4:12.03:0,12,276	0/1:33,0:33:63.17:63,0,103	0/0:3,0:3:9.01:0,9,192	0/0:7,0:7:21.03:0,21,519	0/0:10,0:10:30.07:0,30,718	1/1:2,5:7:15.05:289,15,0	0/0:5,0:5:15.03:0,15,359	0/0:7,0:7:21.01:0,21,348	0/0:5,0:5:6.22:0,6,18	0/0:4,0:4:6.22:0,6,18	0/0:16,0:16:45.14:0,45,1122	0/0:13,0:13:36.11:0,36,946	0/1:12,0:12:1.06:1,0,141	0/0:9,0:9:9.33:0,9,27	0/0:4,0:4:4.66:0,5,13	1/1:0,1:1:3.01:60,3,0	1/1:2,6:8:15.05:298,15,0	./.	0/0:15,0:15:42.14:0,42,1134	0/1:10,0:10:29.75:30,0,94	0/0:6,0:6:4.66:0,5,13	0/0:14,0:14:18.53:0,19,66
chr10	101130161	.	TAC	T	3810.25	PASS	AB=0.526;AC=25;AF=0.463;AN=54;BaseQRankSum=9.203;DP=260;FS=22.907;HRun=0;HaplotypeScore=46.1660;InbreedingCoeff=0.8190;MQ=73.52;MQ0=0;MQRankSum=-0.953;QD=32.29;ReadPosRankSum=-1.386;VQSLOD=2.3956;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.19:0,69,1183	1/1:0,3:3:6.02:92,6,0	0/0:8,0:7:15.51:0,16,207	0/0:8,0:8:5.81:0,6,113	0/0:11,0:11:33.10:0,33,589	0/0:11,0:11:33.07:0,33,567	0/0:5,0:5:15.02:0,15,223	1/1:0,33:33:99:1343,99,0	0/0:3,0:3:9.01:0,9,140	0/0:8,0:8:12.53:0,13,359	0/0:10,0:10:30.07:0,30,509	1/1:7,0:7:14.85:103,15,0	0/0:5,0:5:15.03:0,15,255	0/0:7,0:7:21.01:0,21,270	1/1:0,5:5:12.04:183,12,0	1/1:0,4:4:12.04:183,12,0	0/0:15,0:15:42.11:0,42,741	0/0:13,0:13:36.11:0,36,660	1/1:6,7:13:33.08:430,33,0	1/1:0,10:10:18.06:275,18,0	1/1:0,4:4:9.03:137,9,0	1/1:2,0:2:2.98:22,3,0	1/1:8,0:8:14.88:107,15,0	./.	0/0:14,0:14:39.13:0,39,751	0/1:1,9:10:27.83:341,0,28	1/1:0,6:6:9.03:137,9,0	1/1:1,12:13:30.10:458,30,0
chr10	101130212	.	TTCCCCTCTACAAGCCTTCTA	T	3871.82	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.025;DP=352;FS=8.202;HRun=0;HaplotypeScore=192.5588;InbreedingCoeff=0.9015;MQ=68.70;MQ0=1;MQRankSum=-7.321;QD=124.90;ReadPosRankSum=2.833;VQSLOD=2.5925;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,8114	0/0:6,0:6:12.03:0,12,1008	0/0:15,0:15:45.07:0,45,2539	0/0:19,0:17:37.16:0,37,2773	0/0:15,0:15:42.14:0,42,3593	0/0:14,0:14:39.13:0,39,3404	0/0:16,0:16:48.16:0,48,3938	0/0:24,0:24:66.22:0,66,4510	0/0:3,0:3:9.03:0,9,651	0/0:9,0:9:27.09:0,27,2385	0/0:16,0:16:45.15:0,45,3898	1/1:1,10:11:30.10:1677,30,0	0/0:8,0:8:24.08:0,24,2065	0/0:11,0:11:33.11:0,33,3158	0/0:7,0:7:18.06:0,18,1727	0/0:11,0:11:33.11:0,33,2922	0/0:12,0:12:36.12:0,36,3282	0/0:16,0:16:45.15:0,45,4206	0/0:12,0:12:30.09:0,30,1888	0/0:25,0:25:75.26:0,75,6728	0/0:13,0:13:36.12:0,36,3295	1/1:0,7:7:21.07:1115,21,0	1/1:4,6:10:18.06:912,18,0	1/1:0,3:3:3.01:168,3,0	0/0:13,0:13:39.07:0,39,2599	0/0:9,0:9:27.09:0,27,2168	0/0:8,0:8:21.07:0,21,1703	0/0:4,0:4:9.03:0,9,748
chr10	101130607	.	A	AT	1680.48	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.140;DP=538;FS=2.363;HRun=5;HaplotypeScore=75.1059;InbreedingCoeff=0.9680;MQ=74.88;MQ0=2;MQRankSum=-2.129;QD=24.01;ReadPosRankSum=1.500;VQSLOD=2.7891;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:44.99:391,45,0	0/0:8,0:8:24.06:0,24,258	0/0:20,0:16:31.01:0,31,243	0/0:15,0:13:6.28:0,6,136	0/0:35,0:35:96.20:0,96,1007	0/0:29,0:29:84.20:0,84,895	0/0:12,0:12:33.06:0,33,340	0/0:37,0:37:84.17:0,84,876	0/0:16,0:16:45.06:0,45,458	0/0:21,0:21:57.14:0,57,612	0/0:18,0:18:42.08:0,42,437	1/1:4,7:11:24.01:284,24,0	0/0:23,0:23:66.07:0,66,678	0/0:17,0:17:48.04:0,48,482	0/0:26,0:26:72.06:0,72,738	0/0:17,0:17:45.11:0,45,483	0/0:23,0:23:60.13:0,60,630	0/0:19,0:19:50.71:0,51,502	0/0:18,0:18:42.09:0,42,445	0/0:36,0:36:99:0,99,1021	0/0:9,0:9:24.02:0,24,235	1/1:1,14:15:45.15:575,45,0	1/1:3,8:11:30.05:353,30,0	1/1:3,7:9:23.91:252,24,0	0/0:16,0:16:40.21:0,40,476	0/0:23,0:23:63.11:0,63,658	0/0:26,0:26:72.09:0,72,731	0/0:4,0:4:12.03:0,12,129
chr10	101130612	.	T	TTAAA	1198.56	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=4.192;DP=523;FS=0.000;HRun=0;HaplotypeScore=108.0659;InbreedingCoeff=0.6278;MQ=75.31;MQ0=2;MQRankSum=-2.523;QD=20.31;ReadPosRankSum=-0.801;VQSLOD=3.0830;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:23:48.16:1244,48,0	0/0:8,0:8:24.08:0,24,480	0/0:20,0:16:33.94:0,34,410	0/0:15,0:13:16.89:0,17,312	0/0:35,0:35:99:0,105,1924	0/0:28,0:28:84.28:0,84,1634	0/0:13,0:13:36.08:0,36,615	0/0:31,0:31:87.27:0,87,1606	0/0:18,0:18:53.15:0,53,872	0/0:20,0:20:60.21:0,60,1180	0/0:14,0:14:42.13:0,42,804	0/1:10,0:10:13.15:13,0,31	0/0:22,0:22:66.14:0,66,1240	0/0:16,0:17:48.10:0,48,836	0/0:23,0:25:75.26:0,75,1421	0/0:16,0:16:48.16:0,48,937	0/0:22,0:22:63.19:0,63,1165	0/0:20,0:20:54.13:0,54,994	0/0:15,0:15:45.14:0,45,867	0/0:37,0:37:99:0,108,1870	0/0:9,0:9:27.04:0,27,411	0/1:16,0:16:0.22:0,0,31	0/0:10,0:10:4.08:0,4,25	1/1:10,0:9:9.34:63,9,0	0/0:16,0:17:48.59:0,49,904	0/0:22,0:22:63.14:0,63,1187	0/0:25,0:25:75.15:0,75,1277	0/0:5,0:5:15.04:0,15,265
chr10	101130677	.	A	AT	1917.70	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-2.829;DP=548;FS=0.000;HRun=6;HaplotypeScore=54.5566;InbreedingCoeff=0.8482;MQ=67.45;MQ0=0;MQRankSum=-0.230;QD=28.20;ReadPosRankSum=1.154;VQSLOD=4.0461;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:48.11:0,48,489	0/0:9,0:9:27.06:0,27,275	0/0:2,0:2:5.60:0,6,40	0/1:9,0:9:12.94:33,0,13	0/0:33,0:33:99:0,99,1003	0/0:24,0:24:72.16:0,72,734	0/0:11,0:11:33.07:0,33,337	0/0:33,0:33:87.19:0,87,887	0/0:17,0:17:48.11:0,48,490	0/0:33,0:33:87.19:0,87,884	0/0:28,0:28:78.16:0,78,789	1/1:0,18:18:51.16:641,51,0	0/0:18,0:18:51.11:0,51,520	0/0:15,0:15:45.10:0,45,458	0/0:27,0:27:78.18:0,78,795	0/0:18,0:18:54.11:0,54,544	0/0:15,0:15:42.07:0,42,419	0/0:23,0:23:69.08:0,69,682	0/0:23,0:23:66.13:0,66,663	0/0:29,0:29:81.16:0,81,818	0/0:12,0:12:36.08:0,36,367	1/1:0,17:17:48.11:586,48,0	1/1:1,13:14:42.13:521,42,0	1/1:3,7:9:24.08:301,24,0	0/0:19,0:19:57.13:0,57,582	0/0:24,0:24:72.16:0,72,730	0/0:27,0:26:66.15:0,66,673	0/0:20,0:20:51.11:0,51,520
chr10	101131271	.	T	TTA	2508.54	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-3.579;DP=583;FS=13.341;HRun=0;HaplotypeScore=69.5037;InbreedingCoeff=0.8744;MQ=70.92;MQ0=0;MQRankSum=-0.048;QD=40.46;ReadPosRankSum=0.942;VQSLOD=4.8296;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.23:0,69,1047	0/0:12,0:12:36.09:0,36,523	0/0:9,0:9:24.04:0,24,297	0/1:7,0:7:10.33:10,0,201	0/0:42,0:42:99:0,123,1863	0/0:27,0:27:75.24:0,75,1126	0/0:18,0:18:54.18:0,54,825	0/0:41,0:41:99:0,123,1857	0/0:12,0:12:36.11:0,36,527	0/0:27,0:27:81.27:0,81,1229	0/0:21,0:21:60.20:0,60,912	1/1:1,12:13:39.12:719,39,0	0/0:25,0:25:72.24:0,72,1102	0/0:24,0:24:72.23:0,72,1079	0/0:20,0:20:60.20:0,60,919	0/0:27,0:27:78.25:0,78,1169	0/0:23,0:23:66.22:0,66,1006	0/0:10,0:10:30.10:0,30,457	0/0:27,0:27:81.25:0,81,1201	0/0:32,0:32:93.30:0,93,1396	0/0:6,0:6:18.06:0,18,276	1/1:3,17:20:48.16:925,48,0	1/1:3,9:12:30.10:555,30,0	1/1:0,10:10:24.08:464,24,0	0/0:21,0:21:63.21:0,63,961	0/0:23,0:23:69.22:0,69,1035	0/0:40,0:39:99:0,120,1833	0/0:9,0:9:27.09:0,27,413
chr10	101131328	.	A	AATTTT	3161.44	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-1.546;DP=502;FS=0.000;HRun=0;HaplotypeScore=91.6801;InbreedingCoeff=0.9846;MQ=67.13;MQ0=0;MQRankSum=-5.111;QD=57.48;ReadPosRankSum=0.374;VQSLOD=3.9216;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.19:0,84,1591	0/0:6,0:6:15.05:0,15,311	0/0:11,0:9:22.32:0,22,250	0/0:13,0:13:26.81:0,27,445	0/0:33,0:33:96.29:0,96,1822	0/0:20,0:20:60.13:0,60,1124	0/0:15,0:14:45.15:0,45,873	0/0:25,0:25:63.18:0,63,1125	0/0:12,0:12:33.11:0,33,684	0/0:21,0:21:48.15:0,48,951	0/0:25,0:25:72.22:0,72,1386	1/1:2,10:16:27.01:665,27,0	0/0:20,0:20:54.14:0,54,1061	0/0:18,0:18:39.12:0,39,735	0/0:17,0:17:48.16:0,48,983	0/0:23,0:23:63.19:0,63,1200	0/0:19,0:19:48.03:0,48,820	0/0:8,0:8:24.08:0,24,497	0/0:20,0:20:60.17:0,60,1167	0/0:21,0:21:54.18:0,54,1083	0/0:10,0:10:30.09:0,30,586	1/1:5,12:17:48.16:1245,48,0	1/1:0,14:16:36.09:1052,36,0	1/1:0,6:6:12.04:357,12,0	0/0:24,0:24:60.19:0,60,1167	0/0:14,0:14:36.11:0,36,673	0/0:31,0:30:81.27:0,81,1642	0/0:11,0:11:33.11:0,33,683
chr10	101131709	.	A	AAGG	4874.37	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.508;DP=780;FS=13.713;HRun=0;HaplotypeScore=136.3691;InbreedingCoeff=0.9966;MQ=69.10;MQ0=1;MQRankSum=-7.611;QD=40.28;ReadPosRankSum=-0.055;VQSLOD=5.5030;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:42:99:0,109,1544	0/0:11,0:11:33.11:0,33,489	0/0:29,0:25:23.11:0,23,317	0/0:27,0:25:35.37:0,35,688	0/0:36,0:36:84.19:0,84,1208	0/0:26,0:26:66.21:0,66,961	0/0:29,0:29:52.66:0,53,839	0/0:28,0:28:66.20:0,66,928	0/0:20,0:20:57.19:0,57,844	0/0:29,0:29:75.25:0,75,1092	0/0:20,0:20:51.17:0,51,757	1/1:13,23:37:72.25:1478,72,0	0/0:32,0:32:87.29:0,87,1289	0/0:34,0:34:87.29:0,87,1285	0/0:36,0:36:93.31:0,93,1375	0/0:32,0:32:87.29:0,87,1282	0/0:40,0:40:96.30:0,96,1402	0/0:22,0:22:52.91:0,53,815	0/0:29,0:29:66.13:0,66,902	0/0:32,0:32:78.26:0,78,1140	0/0:15,0:15:27.09:0,27,401	1/1:10,25:36:75.26:1537,75,0	1/1:6,19:25:51.18:1047,51,0	1/1:6,17:23:39.13:811,39,0	0/0:23,0:23:63.21:0,63,933	0/0:25,0:25:60.20:0,60,889	0/0:34,0:34:90.30:0,90,1334	0/0:7,0:7:18.01:0,18,267
chr10	101133344	.	C	CA	2233.77	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.346;DP=669;FS=17.030;HRun=2;HaplotypeScore=84.2661;InbreedingCoeff=0.9966;MQ=79.61;MQ0=0;MQRankSum=-3.996;QD=25.97;ReadPosRankSum=1.993;VQSLOD=2.2714;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1360	0/0:6,0:6:18.06:0,18,223	0/0:18,0:18:48.05:0,48,517	0/0:20,0:20:48.01:0,48,529	0/0:24,0:24:72.21:0,72,879	0/0:32,0:32:84:0,84,1015	0/0:15,0:15:42.12:0,42,510	0/0:42,0:42:99:0,117,1401	0/0:37,0:37:99:0,108,1328	0/0:30,0:30:87.25:0,87,1050	0/0:21,0:21:54.17:0,54,669	1/1:2,23:25:51.05:652,51,0	0/0:28,0:28:78.23:0,78,953	0/0:24,0:24:72.23:0,72,892	0/0:25,0:25:69.22:0,69,855	0/0:27,0:27:75.24:0,75,930	0/0:23,0:23:63.20:0,63,781	0/0:10,0:10:27.08:0,27,324	0/0:23,0:23:63.67:0,64,780	0/0:27,0:27:78.23:0,78,954	0/0:13,0:13:28.57:0,29,402	1/1:5,18:23:48.12:644,48,0	1/1:1,26:27:57.04:759,57,0	1/1:2,9:11:23.83:338,24,0	0/0:33,0:33:99:0,99,1213	0/0:26,0:26:75.22:0,75,910	0/0:26,0:26:72.15:0,72,860	0/0:14,0:14:39.12:0,39,480
chr10	101133384	.	T	TC	1974.02	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.343;DP=675;FS=12.496;HRun=6;HaplotypeScore=94.8250;InbreedingCoeff=0.9989;MQ=88.59;MQ0=0;MQRankSum=-6.386;QD=22.43;ReadPosRankSum=-0.267;VQSLOD=2.1248;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.12:0,72,715	0/0:9,0:9:24.01:0,24,234	0/0:30,0:30:77.89:0,78,747	0/0:21,0:21:62.86:0,63,579	0/0:26,0:26:72.16:0,72,734	0/0:30,0:30:81.13:0,81,810	0/0:12,0:12:27.01:0,27,260	0/0:28,0:28:72.12:0,72,718	0/0:26,0:26:72.16:0,72,734	0/0:33,0:33:93.20:0,93,947	0/0:25,0:25:75.17:0,75,763	1/1:5,17:21:39.12:490,39,0	0/0:34,0:34:93.20:0,93,940	0/0:26,0:26:66.09:0,66,651	0/0:23,0:23:60.11:0,60,600	0/0:27,0:27:69.15:0,69,704	0/0:28,0:28:84.17:0,84,849	0/0:10,0:10:30.07:0,30,306	0/0:30,0:30:72.12:0,72,711	0/0:27,0:27:78.18:0,78,795	0/0:16,0:16:45.01:0,45,436	1/1:5,17:22:48.15:603,48,0	1/1:8,17:26:53.93:625,54,0	1/1:5,13:18:36.03:417,36,0	0/0:32,0:32:87.19:0,87,886	0/0:26,0:26:75.17:0,75,765	0/0:30,0:30:87.17:0,87,874	0/0:12,0:12:36.08:0,36,367
chr10	101133484	.	A	AAC	645.93	PASS	AB=0.903;AC=23;AF=0.460;AN=50;BaseQRankSum=-2.197;DP=538;FS=0.986;HRun=0;HaplotypeScore=100.5592;InbreedingCoeff=0.3381;MQ=70.79;MQ0=18;MQRankSum=0.593;QD=2.56;ReadPosRankSum=-1.324;VQSLOD=2.1366;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:34:19.89:0,20,97	./.	./.	./.	0/1:17,0:17:12.73:13,0,84	0/0:14,0:15:8.86:0,9,78	0/0:15,0:16:5.86:0,6,64	1/1:25,0:25:5.94:41,6,0	0/0:20,0:22:14.52:0,15,98	0/0:18,0:18:11.82:0,12,107	0/0:16,0:16:15.04:0,15,161	1/1:16,0:13:2.99:24,3,0	0/0:15,0:15:14.70:0,15,142	0/0:8,0:8:3.01:0,3,32	1/1:9,5:14:9.03:133,9,0	0/1:14,4:21:20.22:121,0,20	0/0:15,0:18:14.53:0,15,106	0/0:17,0:19:10.81:0,11,90	1/1:10,0:9:3.48:42,3,0	0/1:15,0:15:23.13:58,0,23	0/1:19,7:29:31.30:118,0,31	1/1:22,0:20:2.94:18,3,0	1/1:21,0:20:2.90:42,3,0	1/1:20,0:16:3:26,3,0	0/0:26,0:28:18.83:0,19,168	1/1:12,3:13:9.88:93,10,0	0/1:10,0:12:7.65:39,0,8	1/1:8,4:13:3.01:44,3,0
chr10	101133487	.	A	ACACACAC	177.87	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=3.444;DP=585;FS=11.065;HRun=0;HaplotypeScore=161.5343;InbreedingCoeff=0.3016;MQ=65.44;MQ0=18;MQRankSum=-1.530;QD=4.68;ReadPosRankSum=-1.611;VQSLOD=1.6477;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:76.45:0,76,1020	0/0:3,0:3:6.01:0,6,76	0/0:37,0:23:42.13:0,42,534	0/0:29,0:19:39.11:0,39,482	0/0:21,0:20:44.92:0,45,642	0/0:16,0:16:36.07:0,36,507	0/0:19,0:19:33.87:0,34,495	0/0:23,0:23:49.75:0,50,553	0/0:23,0:23:50.44:0,50,691	0/0:21,0:20:45.87:0,46,625	0/0:16,0:16:40.68:0,41,682	1/1:15,0:12:3.01:90,3,0	0/0:19,0:19:37:0,37,615	0/0:11,0:11:21.07:0,21,303	0/0:17,0:17:29.51:0,30,306	0/0:23,0:23:41.69:0,42,472	0/0:23,0:23:55.87:0,56,734	0/0:23,0:23:42.11:0,42,603	0/0:11,0:10:8.17:0,8,82	0/0:18,0:18:30.77:0,31,428	0/0:31,0:31:41.93:0,42,516	0/0:23,0:21:2.98:0,3,22	0/0:9,12:21:1.09:0,1,34	0/1:23,0:17:55.26:179,0,55	0/0:32,0:31:13.40:0,13,991	0/0:17,0:15:33.94:0,34,335	0/0:13,0:13:25.65:0,26,292	0/0:15,0:15:27:0,27,309
chr10	101134408	.	GTT	G	2959.96	PASS	AB=0.846;AC=29;AF=0.518;AN=56;BaseQRankSum=7.948;DP=591;FS=8.100;HRun=16;HaplotypeScore=95.9083;InbreedingCoeff=0.7486;MQ=69.46;MQ0=0;MQRankSum=-1.864;QD=9.31;ReadPosRankSum=5.861;VQSLOD=1.5390;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:18:35.62:152,36,0	1/1:1,10:11:23.92:201,24,0	0/1:16,1:13:3.11:3,0,170	0/0:18,0:14:0.49:0,0,83	0/0:31,0:34:80.51:0,81,911	0/0:22,0:26:46.16:0,46,555	0/0:17,0:20:47.96:0,48,561	1/1:10,19:31:58.51:472,59,0	0/0:16,0:17:32.27:0,32,325	0/0:28,0:32:72.23:0,72,701	0/0:25,0:28:68.34:0,68,710	1/1:5,0:26:43.87:186,44,0	0/0:15,1:16:15.77:0,16,378	0/0:24,0:26:63.63:0,64,666	1/1:10,18:29:41.06:323,41,0	0/0:19,0:23:38.46:0,38,533	0/0:13,0:16:32.39:0,32,328	0/1:18,3:25:5.21:5,0,534	0/1:8,2:11:26.97:54,0,27	1/1:9,20:31:49.65:491,50,0	1/1:7,6:14:6.69:101,7,0	1/1:1,0:6:8.22:35,8,0	1/1:4,0:10:8.15:35,8,0	1/1:5,0:13:8.03:34,8,0	0/0:15,0:17:37.83:0,38,422	1/1:9,11:21:32.39:261,32,0	1/1:12,23:36:36.82:440,37,0	1/1:2,15:19:41.55:379,42,0
chr10	101134698	.	C	CAATAAATA	897.46	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=2.289;DP=434;FS=5.312;HRun=0;HaplotypeScore=123.4277;InbreedingCoeff=0.7794;MQ=71.14;MQ0=0;MQRankSum=-3.007;QD=37.39;ReadPosRankSum=-0.037;VQSLOD=3.2107;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:36.10:0,36,670	0/0:8,0:8:24.08:0,24,599	0/0:9,0:9:12.04:0,12,258	0/0:10,0:10:1.33:0,1,224	0/0:23,0:23:57.10:0,57,1219	0/0:20,0:20:54.19:0,54,1395	0/0:12,0:12:33.10:0,33,778	0/0:37,0:37:72.22:0,72,1710	0/0:9,0:9:27.08:0,27,616	0/0:19,0:19:48.15:0,48,1162	0/0:25,0:25:66.15:0,66,1436	1/1:2,7:10:15.05:634,15,0	0/0:21,0:21:57.15:0,57,1371	0/0:14,0:14:30.08:0,30,654	0/0:26,0:26:66.13:0,66,1560	0/0:14,0:14:30.09:0,30,637	0/0:14,0:14:39.12:0,39,858	0/0:9,0:9:21.03:0,21,495	0/0:18,0:18:42.10:0,42,940	0/0:23,0:23:60.12:0,60,1426	0/0:7,0:7:12.04:0,12,316	1/1:1,2:3:3.01:127,3,0	1/1:4,3:7:5.93:143,6,0	1/1:0,3:4:3.01:124,3,0	0/0:14,0:14:36.11:0,36,866	0/0:24,0:23:60.16:0,60,1441	0/0:25,0:25:65.99:0,66,1407	0/0:14,0:14:42.10:0,42,899
chr10	101134820	.	T	TATATAC	1141.59	PASS	AB=0.852;AC=10;AF=0.192;AN=52;BaseQRankSum=7.755;DP=341;FS=5.689;HRun=0;HaplotypeScore=89.5443;InbreedingCoeff=0.0142;MQ=58.54;MQ0=10;MQRankSum=-7.565;QD=11.65;ReadPosRankSum=-3.608;VQSLOD=0.9178;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:11:12.04:0,12,171	1/1:2,0:3:3.01:39,3,0	0/0:19,0:9:15.09:0,15,407	0/0:17,0:5:12.04:0,12,218	0/0:17,0:18:42.10:0,42,851	0/0:16,0:17:47.89:0,48,846	0/0:11,0:11:21.35:0,21,426	0/1:15,0:15:99:128,0,269	0/0:8,0:7:17.06:0,17,289	0/0:14,0:14:39.13:0,39,819	0/0:24,0:26:66.15:0,66,1137	1/1:4,0:3:0.89:2,1,0	0/0:9,0:9:24.04:0,24,392	0/0:2,0:2:6.02:0,6,116	0/0:6,0:10:2.24:0,2,48	0/1:4,8:13:58.68:349,0,59	0/0:15,0:14:35.71:0,36,699	0/0:23,0:24:60.07:0,60,1149	0/1:11,0:11:99:146,0,165	0/0:11,0:14:6:0,6,72	0/0:5,0:4:6.02:0,6,87	./.	0/0:4,0:3:3.01:0,3,49	./.	0/0:14,0:14:39.12:0,39,712	0/1:10,0:14:99:307,0,130	0/1:12,0:17:99:194,0,179	0/1:18,0:17:99:104,0,261
chr10	101134914	.	TA	T	467.14	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.707;DP=391;FS=25.806;HRun=5;HaplotypeScore=45.5539;InbreedingCoeff=0.9092;MQ=78.97;MQ0=0;MQRankSum=-1.107;QD=24.59;ReadPosRankSum=-2.187;VQSLOD=1.3383;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:30.10:0,30,410	0/0:3,0:3:9.03:0,9,123	0/0:12,0:12:32.95:0,33,391	0/0:8,0:8:23.58:0,24,255	0/0:20,0:20:60.20:0,60,821	0/0:16,0:16:45.13:0,45,598	0/0:7,0:7:21.07:0,21,286	0/0:34,0:34:90.29:0,90,1215	0/0:9,0:9:24.08:0,24,328	0/0:21,0:21:63.20:0,63,849	0/0:23,0:23:60.20:0,60,817	1/1:0,3:3:9.03:102,9,0	0/0:13,0:13:36.12:0,36,492	0/0:12,0:12:33.10:0,33,435	0/0:16,0:16:45.14:0,45,600	0/0:14,0:14:42.14:0,42,572	0/0:17,0:17:48.16:0,48,656	0/0:27,0:27:75.23:0,75,996	0/0:17,0:17:51.17:0,51,697	0/0:22,0:22:63.21:0,63,862	0/0:7,0:7:21.07:0,21,287	1/1:0,6:6:18.05:204,18,0	1/1:0,8:8:24.07:272,24,0	1/1:0,2:2:3.01:34,3,0	0/0:15,0:15:45.15:0,45,616	0/0:16,0:16:48.14:0,48,625	0/0:16,0:16:48.16:0,48,657	0/0:15,0:15:45.15:0,45,616
chr10	101135092	.	CTTAT	C	1389.95	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.594;DP=549;FS=3.718;HRun=0;HaplotypeScore=92.9307;InbreedingCoeff=0.9799;MQ=90.33;MQ0=0;MQRankSum=-8.088;QD=42.12;ReadPosRankSum=0.652;VQSLOD=4.0640;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.26:0,75,2074	0/0:6,0:5:15.05:0,15,411	0/0:15,0:15:42.14:0,42,1107	0/0:31,0:31:34.73:0,35,1934	0/0:17,0:17:51.18:0,51,1408	0/0:22,0:22:66.23:0,66,1847	0/0:12,0:12:36.12:0,36,998	0/0:33,0:33:96.32:0,96,2563	0/0:29,0:29:84.27:0,84,2240	0/0:29,0:29:84.28:0,84,2222	0/0:21,0:21:63.22:0,63,1763	1/1:0,13:13:33.11:658,33,0	0/0:15,0:15:45.15:0,45,1239	0/0:27,0:27:81.27:0,81,2199	0/0:31,0:31:90.31:0,90,2501	0/0:15,0:15:45.15:0,45,1259	0/0:20,0:20:60.21:0,60,1669	0/0:22,0:22:66.23:0,66,1813	0/0:18,0:18:54.15:0,54,1360	0/0:13,0:13:39.13:0,39,1027	0/0:22,0:22:66.23:0,66,1825	1/1:0,4:4:12.04:239,12,0	1/1:0,7:7:15.05:297,15,0	1/1:0,9:9:18.06:351,18,0	0/0:24,0:24:69.24:0,69,1931	0/0:12,0:12:33.11:0,33,891	0/0:35,0:35:99:0,105,2926	0/0:20,0:20:60.19:0,60,1618
chr10	101135624	.	CTGCTGT	C	652.47	PASS	AB=0.967;AC=11;AF=0.196;AN=56;BaseQRankSum=10.665;DP=725;FS=0.518;HRun=0;HaplotypeScore=181.6717;InbreedingCoeff=0.0607;MQ=49.50;MQ0=7;MQRankSum=-8.596;QD=2.81;ReadPosRankSum=-5.920;VQSLOD=0.7983;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:26:67.94:68,0,639	0/0:13,0:13:20.45:0,20,493	0/0:51,0:31:82.54:0,83,2004	0/0:49,0:27:78.29:0,78,1636	0/0:11,0:10:18.06:0,18,567	0/0:16,0:16:48.16:0,48,1377	0/0:38,0:38:99:0,105,2830	0/1:21,9:28:99:238,0,1207	0/0:28,0:27:81.28:0,81,2530	0/0:29,0:27:71.59:0,72,2029	0/0:9,0:8:6.02:0,6,216	0/0:19,0:19:28.12:0,28,198	0/0:34,0:34:96.33:0,96,3163	0/0:42,0:42:99:0,120,3782	0/1:31,0:31:74.03:74,0,353	0/1:36,0:34:99:163,0,885	0/0:45,0:45:69.83:0,70,3705	0/0:47,0:47:99:0,135,4061	0/0:14,0:11:4.05:0,4,461	0/0:9,0:8:18.06:0,18,428	0/1:65,0:63:99:139,0,1834	1/1:5,0:6:2.93:24,3,0	1/1:5,0:4:1.84:11,2,0	0/1:7,0:7:6.31:6,0,16	0/0:15,0:13:29.92:0,30,623	0/1:22,0:22:68.92:69,0,1085	0/0:18,0:17:25:0,25,552	0/0:6,0:6:18.06:0,18,377
chr10	101135636	.	T	TTGCTGTTGC	6960.75	PASS	AB=0.864;AC=24;AF=0.429;AN=56;BaseQRankSum=8.897;DP=784;FS=1.700;HRun=0;HaplotypeScore=238.4409;InbreedingCoeff=0.5466;MQ=47.89;MQ0=8;MQRankSum=-9.919;QD=20.12;ReadPosRankSum=-3.909;VQSLOD=3.7335;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:24:4.83:377,0,5	1/1:4,9:16:8.86:164,9,0	0/0:59,0:29:38.68:0,39,651	0/0:53,0:30:48.98:0,49,636	0/0:13,0:12:21.06:0,21,457	0/0:19,0:19:48.15:0,48,1136	0/0:40,0:40:84.11:0,84,1660	1/1:28,0:27:45.15:1109,45,0	0/0:33,0:32:72.22:0,72,1830	0/0:34,0:31:42.10:0,42,689	0/0:14,0:13:17.95:0,18,207	0/1:21,0:21:65.97:138,0,66	0/0:36,0:36:93.23:0,93,2333	0/0:40,0:40:99:0,114,3014	0/1:7,25:37:23.36:704,0,23	1/1:39,0:38:81.56:1435,82,0	0/0:47,0:47:74.45:0,74,2548	0/0:42,0:42:93.32:0,93,2522	1/1:18,0:14:9.01:165,9,0	1/1:13,0:11:9:100,9,0	1/1:69,1:68:53.31:1566,53,0	1/1:9,0:9:7.49:57,7,0	0/1:5,0:4:10.91:11,0,15	0/1:7,0:7:10.71:47,0,11	0/0:8,0:6:9.03:0,9,250	1/1:25,0:24:33.04:627,33,0	0/1:10,13:23:18.76:218,0,19	1/1:7,0:7:15.03:243,15,0
chr10	101135648	.	C	CTGT	978.60	PASS	AB=0.971;AC=9;AF=0.161;AN=56;BaseQRankSum=9.395;DP=788;FS=1.084;HRun=0;HaplotypeScore=172.8497;InbreedingCoeff=-0.1698;MQ=48.19;MQ0=7;MQRankSum=-8.101;QD=5.10;ReadPosRankSum=0.415;VQSLOD=2.9362;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:22:7.05:0,7,131	0/1:18,0:18:20.53:21,0,182	0/0:55,0:25:63.16:0,63,912	0/0:52,0:26:65.52:0,66,912	0/0:11,0:11:24.08:0,24,382	0/0:20,0:20:51.16:0,51,795	0/0:46,0:46:99:0,120,1753	0/1:27,0:26:40.37:40,0,405	0/0:33,0:32:90.26:0,90,1359	0/0:29,0:28:66.19:0,66,956	0/0:11,0:11:21.06:0,21,314	0/0:21,0:21:52.47:0,52,475	0/0:40,0:40:99:0,111,1679	0/0:46,0:46:99:0,132,2041	0/1:42,0:42:99:125,0,199	0/1:26,14:39:82.09:804,0,82	0/0:48,0:49:99:0,123,2008	0/0:39,0:39:99:0,105,1601	0/0:23,0:20:35.97:0,36,426	0/0:9,0:8:15.01:0,15,203	0/0:73,0:70:28.25:0,28,1109	0/1:8,0:8:9.72:10,0,11	0/1:7,0:6:9.06:9,0,21	0/0:6,0:6:7.67:0,8,66	0/0:8,0:8:18.05:0,18,264	0/1:20,0:19:4.68:5,0,258	0/1:23,0:23:33.11:33,0,96	0/1:7,0:7:24.04:67,0,24
chr10	101135654	.	CTAT	C	633.69	PASS	AB=0.978;AC=10;AF=0.179;AN=56;BaseQRankSum=7.798;DP=765;FS=0.502;HRun=0;HaplotypeScore=162.6853;InbreedingCoeff=0.0383;MQ=47.71;MQ0=8;MQRankSum=-8.651;QD=3.03;ReadPosRankSum=-2.214;VQSLOD=2.1067;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:19:44.77:45,0,218	0/0:15,0:15:27.91:0,28,564	0/0:52,0:24:63.74:0,64,1116	0/0:45,0:25:75.22:0,75,1410	0/0:15,0:15:30.10:0,30,674	0/0:20,0:20:54.05:0,54,1248	0/0:44,0:44:99:0,126,2807	0/1:25,0:24:99:112,0,928	0/0:32,0:31:93.32:0,93,2125	0/0:27,0:26:65.85:0,66,1416	0/0:11,0:11:23.21:0,23,504	0/0:21,0:21:33.11:0,33,211	0/0:40,0:40:99:0,120,2714	0/0:53,0:53:99:0,160,3564	0/0:41,0:41:29.85:0,30,801	0/1:36,2:37:75.76:211,0,76	0/0:47,0:47:94.99:0,95,3031	0/0:36,0:36:99:0,105,2400	0/0:16,0:16:39.13:0,39,795	0/0:12,0:11:18.06:0,18,425	0/1:73,0:70:99:159,0,2641	1/1:5,3:8:1.39:13,1,0	0/1:6,1:6:0.09:46,0,0	0/1:6,0:6:17.88:18,0,32	0/0:8,0:8:21.07:0,21,496	0/1:22,0:20:34.57:35,0,776	0/0:21,0:21:29.13:0,29,574	0/1:8,0:8:99:136,0,191
chr10	101135663	.	CTGT	C	84.72	PASS	AB=0.938;AC=7;AF=0.125;AN=56;BaseQRankSum=6.364;DP=783;FS=24.245;HRun=0;HaplotypeScore=167.3840;InbreedingCoeff=0.3816;MQ=47.70;MQ0=13;MQRankSum=-5.223;QD=1.16;ReadPosRankSum=1.557;VQSLOD=0.9542;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:24:36.49:36,0,188	0/0:15,0:15:31.80:0,32,538	0/0:42,1:16:14.89:0,15,281	0/0:36,0:20:32.52:0,33,478	0/0:20,0:20:33.03:0,33,527	0/0:20,0:20:45.14:0,45,881	0/0:40,2:42:64.17:0,64,2020	0/0:25,0:24:36.08:0,36,584	0/0:40,0:39:96.30:0,96,1886	0/0:26,0:25:56.96:0,57,897	0/0:12,0:10:12.93:0,13,249	0/1:21,1:22:53.55:54,0,247	0/0:43,0:43:99:0,117,2277	0/0:55,0:55:99:0,129,2523	0/0:45,0:45:66.83:0,67,962	0/0:42,0:38:73.26:0,73,837	0/0:45,0:45:99:0,117,2181	0/0:39,0:39:99:0,99,1788	0/0:20,0:18:42.06:0,42,660	0/0:15,0:13:21.06:0,21,353	0/0:67,0:65:99:0,128,2331	1/1:8,0:8:5.69:37,6,0	1/1:8,1:7:3.30:30,3,0	0/1:5,1:6:12.83:53,0,13	0/0:13,0:12:27.07:0,27,453	0/0:20,0:17:42.07:0,42,638	0/0:20,0:19:30.10:0,30,575	0/0:7,0:7:12.04:0,12,247
chr10	101135690	.	TTGTTGCTGC	T	374.78	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=6.584;DP=848;FS=0.896;HRun=0;HaplotypeScore=242.8937;InbreedingCoeff=0.6646;MQ=49.03;MQ0=31;MQRankSum=-6.455;QD=6.58;ReadPosRankSum=0.303;VQSLOD=2.1435;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,22:29:20.98:434,21,0	0/0:13,0:13:33.03:0,33,835	0/0:28,0:10:21.89:0,22,443	0/0:47,0:21:35.72:0,36,783	0/0:18,0:13:21.07:0,21,498	0/0:20,0:20:45.12:0,45,1336	0/0:59,0:59:99:0,150,4092	0/0:28,0:24:57.61:0,58,1060	0/0:38,0:38:96.19:0,96,3350	0/0:24,0:20:44.78:0,45,1236	0/0:13,0:9:18.06:0,18,396	0/0:18,0:18:35.38:0,35,283	0/0:54,0:54:99:0,138,4122	0/0:54,0:54:99:0,132,4179	0/0:39,0:39:23.93:0,24,2290	0/0:46,0:42:36.26:0,36,1111	0/0:44,0:44:99:0,111,3618	0/0:34,0:34:81.22:0,81,2538	0/0:26,0:17:30.92:0,31,851	0/0:14,0:11:18.04:0,18,417	0/0:87,0:84:99:0,159,4429	1/1:10,0:9:2.44:29,2,0	0/1:8,0:6:13.31:27,0,13	1/1:5,0:5:1.47:5,1,0	0/0:21,0:18:24.05:0,24,659	0/0:32,0:25:47.79:0,48,971	0/0:30,0:29:52.48:0,52,1627	0/0:4,0:4:9.03:0,9,341
chr10	101135693	.	TTGC	T	164.86	PASS	AB=0.881;AC=5;AF=0.089;AN=56;BaseQRankSum=7.077;DP=848;FS=29.306;HRun=0;HaplotypeScore=160.8344;InbreedingCoeff=0.3298;MQ=48.99;MQ0=33;MQRankSum=-5.820;QD=2.50;ReadPosRankSum=-2.879;VQSLOD=0.7514;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:28:33.74:67,0,34	0/0:13,0:13:36.07:0,36,680	0/0:33,0:13:28:0,28,465	0/0:47,0:22:47.24:0,47,776	0/0:17,0:12:24.08:0,24,455	0/0:18,0:18:45.15:0,45,958	0/0:58,0:58:99:0,163,3338	0/0:28,0:24:63.19:0,63,1197	0/0:36,0:36:99:0,105,2068	0/0:24,0:21:54.11:0,54,972	0/0:12,0:9:18.06:0,18,392	0/1:13,4:17:99:163,0,169	0/0:52,0:52:99:0,153,2940	0/0:55,0:55:99:0,150,3011	0/0:42,0:41:59.73:0,60,1392	0/0:47,0:43:92.85:0,93,1469	0/0:45,0:45:99:0,126,2516	0/0:34,0:34:87.28:0,87,1791	0/0:25,0:16:42.10:0,42,744	0/0:15,0:12:18.06:0,18,354	0/0:88,0:85:99:0,179,3418	1/1:10,1:10:8.46:39,8,0	0/0:7,0:6:0.98:0,1,12	0/1:4,1:5:5.60:10,0,6	0/0:21,0:18:30.10:0,30,561	0/0:32,0:26:62.22:0,62,1045	0/0:29,0:28:56.88:0,57,1103	0/0:4,0:4:12.04:0,12,238
chr10	101135717	.	CTGTCGT	C	468.65	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=7.711;DP=799;FS=7.354;HRun=0;HaplotypeScore=177.5499;InbreedingCoeff=0.7181;MQ=51.58;MQ0=15;MQRankSum=-7.248;QD=7.44;ReadPosRankSum=0.863;VQSLOD=1.7782;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:17:0,17,597	0/0:11,0:11:24.08:0,24,765	0/0:41,0:18:46.77:0,47,1077	0/0:56,0:29:83.39:0,83,1976	0/0:13,0:13:30.10:0,30,932	0/0:20,0:20:57.20:0,57,1730	0/0:52,0:52:99:0,148,4878	0/0:30,0:27:78.26:0,78,2355	0/0:42,0:42:99:0,123,3974	0/0:24,0:24:72.25:0,72,2258	0/0:9,0:9:24.08:0,24,747	1/1:3,1:4:2.81:71,3,0	0/0:50,0:50:99:0,144,4685	0/0:47,0:47:99:0,126,4201	0/1:42,0:41:57.06:57,0,2567	0/0:34,0:30:8.10:0,8,975	0/0:45,0:45:99:0,129,4121	0/0:32,0:32:87.26:0,87,2700	0/0:15,0:14:39.13:0,39,1094	0/0:14,0:13:30.10:0,30,921	0/0:90,0:86:99:0,201,6292	1/1:1,7:8:9.03:189,9,0	1/1:5,1:6:15.63:221,16,0	1/1:2,1:3:3.01:72,3,0	0/0:19,0:19:48.16:0,48,1508	0/0:30,0:30:78.27:0,78,2268	0/0:28,0:27:53.60:0,54,2091	0/0:5,0:5:15.05:0,15,437
chr10	101135718	.	TGTC	T	224.94	PASS	AB=0.896;AC=9;AF=0.161;AN=56;BaseQRankSum=7.292;DP=795;FS=0.000;HRun=0;HaplotypeScore=136.0699;InbreedingCoeff=0.5251;MQ=51.60;MQ0=15;MQRankSum=-6.494;QD=2.37;ReadPosRankSum=0.504;VQSLOD=2.3823;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:38.69:0,39,607	0/0:11,0:11:24.08:0,24,535	0/0:41,0:18:47.36:0,47,842	0/0:56,0:30:80.22:0,80,1528	0/0:13,0:13:30.10:0,30,661	0/0:20,0:20:57.15:0,57,1236	0/0:51,0:51:99:0,150,3290	0/0:31,0:29:81.28:0,81,1783	0/0:42,0:42:99:0,123,2667	0/0:25,0:25:75.22:0,75,1636	0/0:8,0:8:24.08:0,24,534	1/1:3,0:3:3:27,3,0	0/0:50,0:50:99:0,141,3076	0/0:46,0:46:99:0,126,2813	0/1:38,4:41:99:109,0,1678	0/1:30,3:29:93.17:93,0,908	0/0:44,0:44:99:0,129,2858	0/0:31,0:31:84.25:0,84,1806	0/0:16,0:15:42.13:0,42,827	0/0:14,0:13:30.10:0,30,685	0/0:89,0:85:99:0,198,4369	1/1:8,0:8:8.72:68,9,0	0/1:5,1:6:2.57:42,0,3	1/1:2,1:3:3.45:23,3,0	0/0:21,0:21:54.18:0,54,1170	0/0:29,0:29:78.27:0,78,1704	0/0:27,1:27:15.12:0,15,1365	0/0:5,0:5:15.05:0,15,336
chr10	101135735	.	CTGT	C	334.92	PASS	AB=0.790;AC=2;AF=0.036;AN=56;BaseQRankSum=5.562;DP=819;FS=0.968;HRun=0;HaplotypeScore=136.8235;InbreedingCoeff=-0.0511;MQ=50.70;MQ0=20;MQRankSum=-4.284;QD=7.97;ReadPosRankSum=0.172;VQSLOD=2.5827;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:21:36.59:0,37,712	0/0:6,0:6:5.99:0,6,86	0/0:36,0:14:26.27:0,26,516	0/0:45,0:29:74.10:0,74,1245	0/0:19,0:16:30.10:0,30,589	0/0:17,0:17:36.05:0,36,683	0/0:54,0:54:99:0,135,2587	0/0:39,0:35:96.28:0,96,1867	0/0:45,0:45:99:0,122,2492	0/0:36,0:34:93.25:0,93,1755	0/0:12,0:10:21.04:0,21,348	0/0:3,0:3:3:0,3,28	0/0:58,0:58:99:0,162,3278	0/0:46,0:46:99:0,123,2247	0/0:33,0:32:72.03:0,72,1165	0/1:12,15:22:63.37:409,0,63	0/0:46,0:46:99:0,123,2480	0/0:31,0:31:81.28:0,81,1716	0/0:20,0:13:27.08:0,27,500	0/0:16,0:15:8.89:0,9,309	0/0:94,0:91:99:0,145,2705	0/1:14,1:15:1.56:2,0,179	0/0:6,0:6:14.98:0,15,173	0/0:4,0:4:3.89:0,4,33	0/0:27,0:27:66.19:0,66,1200	0/0:33,0:31:74.51:0,75,1344	0/0:23,0:22:58.40:0,58,1068	0/0:3,0:3:6.02:0,6,129
chr10	101135756	.	CTGTTGCTGCTGT	C	3671.02	PASS	AB=0.863;AC=15;AF=0.278;AN=54;BaseQRankSum=8.105;DP=845;FS=16.739;HRun=0;HaplotypeScore=240.1858;InbreedingCoeff=0.2632;MQ=46.17;MQ0=52;MQRankSum=-5.955;QD=11.47;ReadPosRankSum=-1.353;VQSLOD=0.8216;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,2:17:9.01:211,9,0	1/1:2,0:2:3.01:83,3,0	0/0:39,0:10:6.02:0,6,129	0/0:45,0:19:3.01:0,3,62	0/0:19,0:13:6.02:0,6,228	0/0:13,0:12:18.06:0,18,753	0/0:40,0:40:75.24:0,75,2747	0/1:36,9:38:99:495,0,107	0/0:48,0:48:99:0,105,4510	0/0:36,0:31:13.22:0,13,180	0/0:14,0:10:4.26:0,4,70	0/0:4,0:4:3.01:0,3,46	0/0:63,0:63:99:0,135,5622	0/0:50,0:50:99:0,108,3941	0/1:22,4:29:28.36:592,0,28	0/1:33,0:29:18.31:553,0,18	0/0:44,0:44:99:0,102,5015	0/0:35,0:34:67.74:0,68,3168	0/1:20,0:8:10.97:60,0,11	1/1:10,7:16:6.02:177,6,0	0/1:55,35:84:99:214,0,117	0/0:26,0:21:11.72:0,12,71	0/0:18,0:14:12.04:0,12,158	0/0:4,0:4:3.48:0,3,51	0/0:25,0:25:18.06:0,18,858	1/1:24,14:32:1.71:745,2,0	1/1:16,2:19:2.70:542,3,0	./.
chr10	101135765	.	CTGT	C	1423.95	PASS	AB=0.986;AC=14;AF=0.250;AN=56;BaseQRankSum=11.695;DP=814;FS=26.613;HRun=0;HaplotypeScore=124.5550;InbreedingCoeff=-0.0662;MQ=44.92;MQ0=50;MQRankSum=-7.616;QD=4.39;ReadPosRankSum=-3.072;VQSLOD=0.4382;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:14:56.72:78,0,57	1/1:3,0:3:8.94:68,9,0	0/0:37,0:10:26.63:0,27,261	0/0:43,0:17:32.15:0,32,342	0/0:19,0:14:14.96:0,15,203	0/0:17,0:16:38.97:0,39,597	0/0:40,0:40:99:0,111,2147	0/1:41,0:32:99:270,0,450	0/0:45,0:45:99:0,123,2433	0/0:37,0:28:54.23:0,54,621	0/0:15,0:10:17.91:0,18,228	0/0:4,0:4:3:0,3,25	0/0:61,0:61:99:0,168,3368	0/0:55,0:55:99:0,153,2914	0/1:30,0:28:99:202,0,136	1/1:22,8:29:0.26:339,0,0	0/0:47,0:47:99:0,132,2628	0/0:32,0:31:86.73:0,87,1751	0/1:19,0:10:69.98:92,0,70	0/1:14,0:13:16.67:26,0,17	0/1:83,0:75:17.24:17,0,480	0/1:25,0:20:16.14:16,0,23	0/0:17,1:13:13.96:0,14,213	0/0:4,0:4:3.48:0,3,31	0/0:16,0:16:30.06:0,30,508	0/1:31,1:25:99:237,0,197	0/1:19,2:21:99:196,0,178	0/1:4,0:4:36.82:37,0,58
chr10	101135894	.	C	CTGTTGT	181.70	PASS	AB=0.904;AC=8;AF=0.160;AN=50;BaseQRankSum=5.060;DP=909;FS=2.816;HRun=0;HaplotypeScore=122.0336;InbreedingCoeff=0.1910;MQ=34.88;MQ0=214;MQRankSum=-3.666;QD=1.50;ReadPosRankSum=-1.287;VQSLOD=2.4567;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:20:54.22:54,0,298	0/0:15,0:12:14.92:0,15,211	./.	./.	0/0:24,0:17:9.02:0,9,140	0/0:20,0:15:18.03:0,18,346	0/0:59,0:36:62.93:0,63,954	0/0:24,0:12:36.09:0,36,694	0/0:54,0:48:93.09:0,93,1730	0/0:39,0:22:45.13:0,45,946	./.	1/1:1,0:1:3.01:52,3,0	0/0:59,0:50:87.28:0,87,1912	0/0:62,0:55:99:0,105,2123	0/0:56,0:27:54.19:0,54,1209	0/1:58,0:26:13.19:13,0,916	0/0:54,0:51:99:0,114,2427	0/0:30,0:25:54.19:0,54,1238	0/0:22,0:6:18.06:0,18,378	0/0:28,0:26:15.01:0,15,205	0/0:61,0:41:53.94:0,54,1033	0/1:9,1:6:15.33:15,0,58	0/1:11,6:15:66.21:66,0,72	1/1:2,1:2:0.68:103,1,0	0/0:19,0:10:2.94:0,3,18	0/0:41,0:18:39.10:0,39,736	0/0:36,0:27:44.98:0,45,1045	0/0:19,0:14:18.01:0,18,287
chr10	101135948	.	C	CTGT	972.88	PASS	AB=0.915;AC=6;AF=0.125;AN=48;BaseQRankSum=8.013;DP=800;FS=21.459;HRun=0;HaplotypeScore=103.3201;InbreedingCoeff=0.1421;MQ=39.60;MQ0=136;MQRankSum=-6.928;QD=8.46;ReadPosRankSum=0.614;VQSLOD=1.2714;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:19:7.98:42,8,0	./.	0/0:32,0:3:9.02:0,9,121	0/0:44,0:6:18.06:0,18,267	0/0:23,0:19:17.51:0,18,296	0/0:25,0:24:60.14:0,60,972	0/0:62,0:55:99:0,141,2222	0/0:42,0:12:30.08:0,30,410	0/0:48,0:46:99:0,117,1860	0/0:53,0:47:99:0,132,2007	0/0:13,0:12:10.28:0,10,155	0/0:1,0:1:3.01:0,3,45	0/0:67,0:63:99:0,171,2775	0/0:64,0:60:99:0,165,2715	0/1:39,11:22:67.79:740,0,68	0/0:27,0:14:19.69:0,20,160	0/0:55,0:53:89.58:0,90,2041	0/0:25,0:20:54.15:0,54,861	0/0:19,0:3:6.02:0,6,86	./.	./.	0/1:14,0:10:43.66:46,0,44	0/0:5,0:4:6.02:0,6,96	0/1:2,0:2:5.48:5,0,41	0/0:23,0:21:54.12:0,54,850	0/0:25,0:12:20.90:0,21,246	0/1:21,5:15:46.52:256,0,47	./.
chr10	101135999	.	C	CTGT	1129.90	PASS	AB=0.678;AC=14;AF=0.318;AN=44;BaseQRankSum=5.168;DP=732;FS=21.035;HRun=0;HaplotypeScore=101.8254;InbreedingCoeff=0.6404;MQ=46.22;MQ0=78;MQRankSum=-7.911;QD=7.69;ReadPosRankSum=-2.869;VQSLOD=0.9379;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:6:2.96:20,3,0	0/0:1,0:1:0:0,0,0	0/0:42,0:11:29.92:0,30,394	0/0:47,0:11:26.77:0,27,279	0/0:27,0:24:35.87:0,36,567	0/0:25,0:24:51.15:0,51,758	0/0:61,0:61:99:0,168,2542	0/1:12,11:9:24.70:129,0,25	0/0:58,0:58:99:0,169,2570	0/0:54,0:49:99:0,141,2154	0/0:20,0:20:47.19:0,47,718	1/1:2,0:2:5.51:56,6,0	0/0:66,0:65:99:0,183,2754	0/0:56,0:56:99:0,159,2383	1/1:13,39:20:23.80:291,24,0	0/1:9,8:16:67.69:546,0,68	0/0:39,0:38:93.32:0,93,1484	0/0:29,1:29:87.23:0,87,1320	1/1:8,3:2:6.01:80,6,0	./.	./.	./.	./.	./.	0/0:32,0:29:69.21:0,69,1012	1/1:4,9:5:8.90:60,9,0	1/1:6,10:5:6.02:102,6,0	./.
chr10	101136095	.	TTTTTAC	T	356.25	PASS	AB=0.901;AC=6;AF=0.107;AN=56;BaseQRankSum=5.311;DP=962;FS=37.564;HRun=0;HaplotypeScore=123.3614;InbreedingCoeff=0.1650;MQ=36.69;MQ0=175;MQRankSum=-4.195;QD=2.68;ReadPosRankSum=-1.471;VQSLOD=0.3282;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:17:15.02:0,15,437	0/0:13,0:11:20.86:0,21,734	0/0:24,0:1:3.01:0,3,82	0/1:31,0:2:2.36:2,0,38	0/0:22,0:14:3.01:0,3,110	0/0:24,0:19:42.14:0,42,1318	0/0:68,0:61:99:0,144,4913	0/0:30,0:13:39.12:0,39,1276	0/0:52,0:46:94.19:0,94,3081	0/0:34,0:18:51.18:0,51,1717	0/0:16,0:10:9.03:0,9,290	0/1:10,3:12:99:183,0,729	0/0:56,0:48:99:0,109,3798	0/0:57,0:53:99:0,120,4100	0/0:89,0:61:99:0,135,4522	0/1:66,2:40:78.42:78,0,3561	0/0:45,0:40:90.27:0,90,2938	0/0:33,0:29:75.26:0,75,2526	0/0:13,0:2:6.02:0,6,220	0/0:22,0:18:24.08:0,24,785	0/0:84,0:61:99:0,114,3880	0/0:10,0:5:9.03:0,9,219	1/1:10,2:5:8.98:154,9,0	0/1:7,2:8:55.85:56,0,304	0/0:22,0:20:13.60:0,14,400	0/0:43,0:25:75.26:0,75,2591	0/0:41,0:34:89.01:0,89,3015	0/0:11,0:8:21.07:0,21,770
chr10	101136188	.	TTGCTGC	T	697.54	PASS	AB=0.877;AC=7;AF=0.125;AN=56;BaseQRankSum=7.887;DP=983;FS=37.928;HRun=0;HaplotypeScore=190.7769;InbreedingCoeff=0.1433;MQ=45.44;MQ0=65;MQRankSum=-7.084;QD=5.32;ReadPosRankSum=-1.234;VQSLOD=1.2209;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:33:71.05:0,71,1444	0/0:8,0:7:18.05:0,18,429	0/1:36,0:5:3.87:4,0,193	0/0:54,0:16:34.27:0,34,947	0/0:25,0:22:36.07:0,36,951	0/0:17,0:17:45.14:0,45,1358	0/0:48,0:48:99:0,138,4059	0/0:37,0:27:58.28:0,58,1516	0/0:55,0:55:99:0,159,4816	0/0:47,0:39:90.20:0,90,2856	0/0:13,0:11:26.64:0,27,662	0/1:14,5:19:99:299,0,219	0/0:51,0:51:99:0,137,3979	0/0:55,0:54:99:0,153,4695	0/0:62,0:50:99:0,110,3018	0/1:25,3:26:99:212,0,191	0/0:58,0:58:99:0,153,4506	0/0:37,0:37:99:0,102,3081	0/0:22,0:9:21.96:0,22,622	0/0:31,0:28:53.09:0,53,1440	0/0:86,0:74:99:0,179,4988	0/1:14,3:12:55.86:64,0,56	1/1:13,2:6:5.93:86,6,0	0/1:13,3:16:99:158,0,144	0/0:31,0:27:60.19:0,60,1634	0/0:40,0:36:99:0,105,2815	0/0:30,0:28:66.14:0,66,1713	0/0:6,0:6:18.04:0,18,549
chr10	101136245	.	TTGCTGTTGC	T	910.94	PASS	AB=0.903;AC=4;AF=0.071;AN=56;BaseQRankSum=6.804;DP=978;FS=63.477;HRun=0;HaplotypeScore=247.7059;InbreedingCoeff=-0.0870;MQ=46.76;MQ0=51;MQRankSum=-6.690;QD=11.25;ReadPosRankSum=-0.625;VQSLOD=0.3858;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:68,0:60:99:0,151,3641	0/0:12,0:11:33.06:0,33,810	0/0:46,0:7:11.37:0,11,260	0/0:58,0:12:19.15:0,19,318	0/0:25,0:21:53.99:0,54,1435	0/0:26,0:26:60.08:0,60,1595	0/0:57,0:57:99:0,150,4772	0/0:29,0:22:57.17:0,57,1565	0/0:45,0:45:99:0,117,3954	0/0:33,0:28:75.25:0,75,2485	0/0:14,0:12:24.03:0,24,549	0/1:22,5:27:99:397,0,114	0/0:49,0:48:99:0,138,4616	0/0:51,0:51:99:0,147,4582	0/0:53,0:48:99:0,138,5045	0/0:43,0:42:9.26:0,9,653	0/0:41,0:41:99:0,117,3830	0/0:33,0:33:96.31:0,96,3348	0/0:13,0:4:3.01:0,3,46	0/0:25,0:25:69.09:0,69,1631	0/0:82,0:76:99:0,198,6535	0/1:18,0:10:25.69:28,0,26	0/1:13,0:9:29.84:30,0,33	0/1:14,7:23:44.79:564,0,45	0/0:21,0:19:51.15:0,51,1168	0/0:40,0:31:87.27:0,87,2599	0/0:27,0:24:69.22:0,69,2583	0/0:5,0:5:15.01:0,15,528
chr10	101136281	.	CTGT	C	1826.73	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.536;DP=972;FS=21.710;HRun=0;HaplotypeScore=144.0462;InbreedingCoeff=0.9263;MQ=50.37;MQ0=29;MQRankSum=-3.612;QD=18.27;ReadPosRankSum=-0.107;VQSLOD=1.9826;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:42:92.23:0,92,1275	0/0:8,0:8:18.06:0,18,374	0/0:60,0:29:68.41:0,68,1043	0/0:54,0:21:47.18:0,47,869	0/0:25,1:24:0.67:0,1,702	0/0:26,0:26:60.16:0,60,1134	0/0:47,0:47:99:0,117,2281	0/0:39,0:36:96.32:0,96,1873	0/0:38,1:39:66.88:0,67,2044	0/0:42,0:39:90.28:0,90,1736	0/0:13,0:13:27.09:0,27,560	1/1:5,27:32:22.23:745,22,0	0/0:45,1:46:72.90:0,73,2174	0/0:46,0:46:99:0,120,2388	0/0:48,0:48:99:0,114,2302	0/0:46,0:43:43.27:0,43,1451	0/0:35,0:35:93.29:0,93,1764	0/0:30,0:30:80.64:0,81,1585	0/0:16,0:10:21.07:0,21,401	0/0:29,1:30:27.77:0,28,1246	0/0:78,0:75:99:0,175,3360	1/1:9,8:16:33.11:448,33,0	1/1:2,9:11:15.05:222,15,0	1/1:8,32:40:42.02:570,42,0	0/0:28,0:28:81.28:0,81,1603	0/0:29,0:28:66.21:0,66,1321	0/0:32,0:31:69.23:0,69,1362	0/0:9,0:9:24.08:0,24,471
chr10	101136383	.	TC	T	1101.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.875;DP=930;FS=0.673;HRun=2;HaplotypeScore=103.8177;InbreedingCoeff=1.0000;MQ=75.30;MQ0=0;MQRankSum=-3.111;QD=33.37;ReadPosRankSum=1.941;VQSLOD=3.5145;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,153,2149	0/0:16,0:16:48.14:0,48,696	0/0:33,0:32:87.29:0,87,1301	0/0:32,0:30:69.18:0,69,972	0/0:32,0:32:93.02:0,93,1231	0/0:22,0:22:60.19:0,60,877	0/0:36,0:36:99:0,105,1512	0/0:36,0:36:99:0,108,1545	0/0:37,0:37:99:0,108,1595	0/0:37,0:37:99:0,111,1645	0/0:22,0:22:60.19:0,60,877	0/0:38,0:38:99:0,105,1531	0/0:45,0:45:99:0,135,1963	0/0:40,0:40:99:0,120,1776	0/0:63,0:63:99:0,184,2664	1/1:4,29:33:96.23:1196,96,0	0/0:46,0:46:99:0,135,2020	0/0:28,0:27:78.21:0,78,1121	0/0:17,0:17:51.15:0,51,726	0/0:24,0:24:72.24:0,72,1071	0/0:38,0:38:99:0,114,1661	0/0:21,0:21:45.02:0,45,620	0/0:22,0:22:54.10:0,54,780	0/0:48,0:48:99:0,123,1814	0/0:32,0:32:93.21:0,93,1332	0/0:34,0:34:99:0,102,1505	0/0:23,0:23:66.21:0,66,966	0/0:20,0:20:60.20:0,60,893
chr10	101136831	.	CATATATATATATATATATATAT	C	721.83	PASS	AC=2;AF=0.083;AN=24;BaseQRankSum=3.723;DP=178;FS=4.227;HRun=0;HaplotypeScore=92.2790;InbreedingCoeff=0.3056;MQ=68.61;MQ0=3;MQRankSum=-3.523;QD=51.56;ReadPosRankSum=1.452;VQSLOD=2.2193;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,7:14:15.05:803,15,0	0/0:3,0:3:3.01:0,3,251	./.	./.	./.	0/0:8,0:8:3.01:0,3,74	./.	0/0:31,0:30:45.15:0,45,2590	./.	0/0:4,0:4:3.01:0,3,230	./.	./.	./.	./.	./.	0/0:6,0:6:0.09:0,0,129	0/0:10,0:14:21.07:0,21,1791	0/0:8,0:8:12.51:0,13,1101	0/0:2,0:2:6.02:0,6,165	0/0:6,0:6:5.99:0,6,115	./.	./.	./.	./.	./.	0/0:9,0:9:5.98:0,6,138	./.	0/0:8,0:8:3.01:0,3,279
chr10	101139298	.	A	ATGTG	8383.09	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=16.538;DP=983;FS=17.662;HRun=0;HaplotypeScore=277.2309;InbreedingCoeff=0.9726;MQ=51.95;MQ0=13;MQRankSum=-14.800;QD=20.65;ReadPosRankSum=-8.385;VQSLOD=1.9786;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:43:79.97:0,80,1510	1/1:5,0:5:5.51:57,6,0	0/0:51,0:30:42.09:0,42,626	0/0:58,0:40:72.04:0,72,1045	0/0:29,0:30:66.18:0,66,1006	0/0:27,0:27:66.19:0,66,1059	0/0:39,0:38:80.58:0,81,1334	1/1:48,0:40:56.72:626,57,0	0/0:29,0:29:78.22:0,78,1246	0/0:42,0:43:99:0,117,1905	0/0:25,0:25:60.19:0,60,979	1/1:13,16:28:60.16:1289,60,0	0/0:32,0:33:83.62:0,84,1325	0/0:50,0:52:99:0,129,2088	1/1:26,0:30:23.16:384,23,0	0/0:32,0:34:81.24:0,81,1272	0/0:38,0:40:91.12:0,91,1433	0/0:37,0:37:89.57:0,90,1372	1/1:28,0:25:21.97:348,22,0	1/1:22,0:28:18.06:301,18,0	1/1:53,0:50:37.56:318,38,0	1/1:12,12:25:48.01:1045,48,0	1/1:7,26:37:77.58:1702,78,0	1/1:24,8:34:34.58:479,35,0	0/0:35,0:35:90.29:0,90,1469	1/1:10,0:33:8.14:700,8,0	1/1:23,0:30:50.76:751,51,0	1/1:8,0:14:32.36:382,32,0
chr10	101139345	.	C	CAT	17220.68	PASS	AB=0.622;AC=27;AF=0.482;AN=56;BaseQRankSum=10.559;DP=966;FS=20.211;HRun=0;HaplotypeScore=195.5445;InbreedingCoeff=0.9326;MQ=60.02;MQ0=1;MQRankSum=-7.816;QD=37.76;ReadPosRankSum=0.731;VQSLOD=3.5457;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:44:48.74:771,49,0	1/1:1,5:7:18:321,18,0	0/0:45,0:36:85.58:0,86,1158	0/0:41,0:32:74.87:0,75,896	0/0:21,0:21:59.89:0,60,753	0/0:33,0:33:96.19:0,96,1376	0/0:32,0:32:93.12:0,93,1306	1/1:0,48:47:99:2002,138,0	0/0:39,0:39:99:0,111,1660	0/0:44,0:44:99:0,120,1644	0/0:18,0:18:51:0,51,659	1/1:2,44:46:99:2389,123,0	0/0:37,0:38:99:0,114,1637	0/0:53,0:53:99:0,147,2152	1/1:2,29:32:75.26:1500,75,0	0/0:36,1:37:46.15:0,46,1557	0/0:42,0:42:99:0,117,1697	0/0:35,0:35:99:0,99,1387	1/1:3,15:17:46.65:723,47,0	1/1:2,17:19:30.10:606,30,0	1/1:4,63:69:99:2472,124,0	1/1:5,23:28:57.20:1136,57,0	1/1:20,13:33:42.79:995,43,0	1/1:0,36:36:57.19:1142,57,0	0/0:30,0:30:84.03:0,84,1082	0/1:11,17:28:10.95:1133,0,11	1/1:5,22:27:62.69:1129,63,0	1/1:0,16:16:45.15:902,45,0
chr10	101139470	.	ATG	A	1608.40	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.962;DP=1060;FS=8.793;HRun=0;HaplotypeScore=184.0357;InbreedingCoeff=0.9994;MQ=59.56;MQ0=8;MQRankSum=-1.300;QD=21.74;ReadPosRankSum=1.507;VQSLOD=3.7646;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,22:25:48.11:598,48,0	0/0:10,0:10:27.09:0,27,459	0/0:70,0:46:94.98:0,95,1486	0/0:49,0:29:53.32:0,53,783	0/0:36,0:36:99:0,100,1642	0/0:21,0:21:57.19:0,57,963	0/0:36,0:36:81.95:0,82,1398	0/0:35,0:35:81.23:0,81,1318	0/0:43,0:43:99:0,117,1933	0/0:46,0:46:99:0,132,2205	0/0:21,0:21:63.22:0,63,1071	0/0:55,0:54:99:0,123,2061	0/0:38,0:38:99:0,105,1774	0/0:45,0:45:99:0,132,2170	0/0:27,0:26:60.21:0,60,1014	1/1:8,38:45:87.28:1132,87,0	0/0:38,0:38:99:0,108,1806	0/0:25,0:25:59.46:0,59,972	0/0:26,0:26:57.17:0,57,884	0/0:37,0:37:99:0,102,1707	0/0:103,0:103:99:0,279,4515	0/0:43,0:43:99:0,105,1777	0/0:16,0:16:39.13:0,39,662	0/0:54,0:53:99:0,132,2194	0/0:36,0:36:87.77:0,88,1480	0/0:31,0:31:71.73:0,72,1165	0/0:29,0:28:51.17:0,51,851	0/0:15,0:15:45.04:0,45,701
chr10	101139489	.	TG	T	538.11	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.411;DP=1016;FS=7.554;HRun=7;HaplotypeScore=173.5076;InbreedingCoeff=0.9990;MQ=61.91;MQ0=7;MQRankSum=-4.091;QD=17.36;ReadPosRankSum=-3.086;VQSLOD=1.3367;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:28:70.63:633,71,0	0/0:11,0:11:30.07:0,30,352	0/0:58,0:41:56.07:0,56,873	0/0:52,0:33:83.69:0,84,959	0/0:31,0:31:87.22:0,87,1042	0/0:24,0:24:69.22:0,69,859	0/0:30,0:30:72.20:0,72,877	0/0:38,0:38:99:0,99,1193	0/0:37,0:37:99:0,105,1272	0/0:44,0:44:99:0,117,1430	0/0:24,0:24:66.19:0,66,804	0/0:53,0:52:99:0,147,1770	0/0:35,1:36:71.86:0,72,1201	0/0:50,0:50:99:0,138,1695	0/0:27,0:26:72.01:0,72,834	0/0:39,0:37:96.29:0,96,1193	0/0:45,0:45:99:0,123,1510	0/0:22,0:22:60.15:0,60,740	0/0:24,0:24:60.06:0,60,696	0/0:33,0:33:87.17:0,87,1069	0/0:101,0:101:99:0,271,3302	0/0:41,0:41:90.18:0,90,1103	0/0:20,0:20:54.15:0,54,656	0/0:51,0:50:99:0,119,1418	0/0:34,0:34:96.31:0,96,1202	0/0:27,0:27:58.98:0,59,708	0/0:22,0:21:45.14:0,45,564	0/0:10,0:10:30.08:0,30,363
chr10	101139509	.	ATG	A	3936.52	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.919;DP=943;FS=8.241;HRun=0;HaplotypeScore=178.1718;InbreedingCoeff=0.9931;MQ=60.11;MQ0=18;MQRankSum=-4.992;QD=28.94;ReadPosRankSum=3.453;VQSLOD=4.9678;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:69.23:0,69,1085	0/0:10,0:10:27.09:0,27,453	0/0:56,0:24:50.80:0,51,733	0/0:59,0:28:65.54:0,66,959	0/0:24,0:24:57.19:0,57,958	0/0:24,0:24:66.23:0,66,1112	0/0:27,0:27:69.23:0,69,1148	0/0:42,0:41:99:0,102,1692	0/0:40,0:40:99:0,102,1699	0/0:34,0:34:69.24:0,69,1168	0/0:15,0:15:39.13:0,39,651	1/1:7,43:50:99:1714,132,0	0/0:41,0:41:99:0,114,1899	0/0:43,0:43:99:0,120,2005	0/0:33,0:32:84.27:0,84,1379	0/0:40,0:40:99:0,105,1753	0/0:41,0:41:90.09:0,90,1610	0/0:21,0:21:54.14:0,54,872	0/0:21,0:21:48.16:0,48,798	0/0:26,1:26:15.15:0,15,782	0/0:88,0:87:99:0,196,3226	1/1:8,26:34:65.77:857,66,0	1/1:2,15:17:39.13:507,39,0	1/1:9,26:34:66.32:858,66,0	0/0:33,0:33:63.22:0,63,1058	0/0:24,0:24:57.12:0,57,885	0/0:23,0:22:39.13:0,39,628	0/0:7,0:7:18.06:0,18,306
chr10	101139535	.	TTGTG	T	2805.09	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.106;DP=941;FS=4.912;HRun=0;HaplotypeScore=228.1668;InbreedingCoeff=0.9584;MQ=53.03;MQ0=30;MQRankSum=-6.870;QD=23.38;ReadPosRankSum=0.802;VQSLOD=3.1807;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:32:33.88:0,34,809	0/0:11,0:12:29.76:0,30,394	0/0:60,1:10:10.53:0,11,194	0/0:72,0:19:21.91:0,22,302	0/0:22,0:24:56.95:0,57,1148	0/0:24,0:24:53.38:0,53,1110	0/0:25,0:26:62.45:0,62,1242	0/0:44,0:42:80.45:0,80,684	0/0:45,0:45:99:0,111,2487	0/0:28,0:27:66.70:0,67,1488	0/0:19,0:19:53.95:0,54,1103	1/1:22,23:45:99:1440,111,0	0/0:43,0:43:99:0,99,2095	0/0:37,0:38:87.06:0,87,1846	0/0:33,0:33:63.01:0,63,675	0/0:41,0:40:80.81:0,81,1183	0/0:34,0:35:83.25:0,83,1958	0/0:25,0:25:63.22:0,63,1481	0/0:25,0:23:36.93:0,37,413	0/0:25,0:26:35.18:0,35,392	0/0:75,0:76:99:0,169,1695	1/1:13,8:21:42.06:557,42,0	1/1:8,8:17:36.09:455,36,0	1/1:18,19:36:41.70:513,42,0	0/0:28,0:28:63.20:0,63,1422	0/0:27,0:27:57.10:0,57,703	0/0:25,0:24:28.10:0,28,363	0/0:2,0:2:5.95:0,6,67
chr10	101139548	.	T	TGC	6553.15	PASS	AB=0.622;AC=17;AF=0.304;AN=56;BaseQRankSum=4.473;DP=894;FS=5.435;HRun=0;HaplotypeScore=186.1296;InbreedingCoeff=0.8472;MQ=54.28;MQ0=23;MQRankSum=1.866;QD=24.92;ReadPosRankSum=-2.096;VQSLOD=4.7536;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:29:59.73:0,60,884	1/1:3,10:13:18.83:518,19,0	0/0:55,0:13:12.56:0,13,192	0/0:61,0:12:30:0,30,375	0/0:22,0:22:60.02:0,60,791	0/0:21,0:21:56.52:0,57,800	0/0:25,0:25:68.99:0,69,888	1/1:7,32:36:66.11:669,66,0	0/0:45,0:45:99:0,129,1799	0/0:36,0:35:92.87:0,93,1222	0/0:19,0:19:42.28:0,42,726	0/0:44,0:44:99:0,115,663	0/0:41,0:41:99:0,114,1572	0/0:35,0:35:95.91:0,96,1322	1/1:17,14:30:70.94:1041,71,0	0/0:35,0:34:83.52:0,84,1170	0/0:35,0:35:82.47:0,82,1252	0/0:25,0:25:72.17:0,72,1004	1/1:13,16:28:4.52:370,5,0	0/1:9,14:23:12.59:403,0,13	1/1:54,23:76:99:2263,152,0	0/0:19,0:19:43.78:0,44,261	0/0:16,0:16:41.27:0,41,243	0/0:35,0:34:49.62:0,50,293	0/0:29,0:28:75.19:0,75,1038	1/1:3,26:29:41.54:826,42,0	1/1:1,18:19:17.26:415,17,0	1/1:2,1:3:0.45:47,0,0
chr10	101139552	.	CGT	C	3039.11	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.196;DP=869;FS=2.838;HRun=0;HaplotypeScore=191.9858;InbreedingCoeff=0.9730;MQ=54.49;MQ0=19;MQRankSum=-3.383;QD=16.88;ReadPosRankSum=-0.898;VQSLOD=3.6865;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,16:31:65.51:732,66,0	0/0:14,0:14:26.75:0,27,210	0/0:53,0:13:13.72:0,14,158	0/0:55,0:12:18.40:0,18,187	0/0:22,0:22:18.46:0,18,761	0/0:20,0:20:39.60:0,40,620	0/0:24,0:24:25.89:0,26,825	0/0:37,0:34:50.89:0,51,398	0/0:43,1:44:68.50:0,69,1490	0/0:36,2:38:62.68:0,63,1392	0/0:19,0:19:44.50:0,45,661	1/1:20,22:43:79.57:716,80,0	0/0:37,1:38:17.81:0,18,1241	0/0:34,1:35:44.45:0,44,1118	0/0:31,0:31:53.48:0,53,409	1/1:11,21:31:72.68:865,73,0	0/0:34,0:34:34.06:0,34,1148	0/0:26,0:26:29.73:0,30,914	0/0:27,0:28:37.56:0,38,280	0/0:23,0:23:37.30:0,37,306	0/0:72,0:72:99:0,132,1033	1/1:9,8:17:29.97:258,30,0	1/1:10,9:19:39.98:392,40,0	1/1:16,19:34:28.17:263,28,0	0/0:27,1:27:29.59:0,30,941	0/0:28,0:28:48.02:0,48,384	0/0:17,0:17:25.70:0,26,203	0/0:3,0:3:7.20:0,7,58
chr10	101140136	.	A	AAC	4129.76	PASS	AB=0.670;AC=15;AF=0.268;AN=56;BaseQRankSum=7.611;DP=649;FS=1.837;HRun=0;HaplotypeScore=103.7626;InbreedingCoeff=0.7149;MQ=72.25;MQ0=2;MQRankSum=0.749;QD=21.29;ReadPosRankSum=0.152;VQSLOD=4.1586;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:70.87:0,71,1107	0/1:7,5:12:5.74:163,0,6	0/0:29,0:18:31.98:0,32,378	0/0:36,0:26:21.28:0,21,421	0/0:19,0:19:48.14:0,48,615	0/0:22,0:22:60.18:0,60,774	0/0:27,0:27:75.21:0,75,953	0/1:14,8:22:6.92:281,0,7	0/0:21,0:21:54.16:0,54,694	0/0:27,0:27:78.22:0,78,981	0/0:15,0:15:39.13:0,39,512	0/0:22,0:22:45.13:0,45,553	0/0:28,0:28:78.25:0,78,1023	0/0:30,0:30:84.23:0,84,1071	1/1:9,26:35:16.26:887,16,0	0/0:21,0:21:57.18:0,57,736	0/0:19,0:19:48.11:0,48,609	0/0:14,0:14:39.13:0,39,511	1/1:7,11:18:31.33:366,31,0	1/1:20,6:26:9.77:363,10,0	1/1:6,15:21:33.11:518,33,0	0/0:24,0:24:51.02:0,51,606	0/0:26,0:26:54.02:0,54,638	0/0:16,0:16:36.12:0,36,456	0/0:18,0:17:44.48:0,44,522	0/1:6,18:24:46.03:552,0,46	1/1:10,15:27:6.61:664,7,0	1/1:3,6:9:6.32:337,6,0
chr10	101140145	.	TCA	T	1731.48	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.618;DP=629;FS=6.239;HRun=0;HaplotypeScore=110.2387;InbreedingCoeff=0.9824;MQ=68.07;MQ0=2;MQRankSum=-2.534;QD=20.37;ReadPosRankSum=-0.093;VQSLOD=3.3265;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:81.75:0,82,1329	0/0:10,0:10:14.98:0,15,147	0/0:27,0:16:29.91:0,30,389	0/0:32,0:21:30.41:0,30,370	0/0:17,0:17:48.15:0,48,768	0/0:21,0:21:60.21:0,60,994	0/0:26,0:26:60.20:0,60,987	0/0:23,0:23:42.08:0,42,504	0/0:22,0:22:51.16:0,51,809	0/0:25,0:25:63.21:0,63,997	0/0:15,0:15:39.13:0,39,639	1/1:3,16:19:36.12:454,36,0	0/0:29,0:29:78.25:0,78,1257	0/0:29,0:29:78.27:0,78,1285	0/0:34,0:34:51.18:0,51,631	0/0:21,0:21:57.19:0,57,942	0/0:18,0:18:48.14:0,48,757	0/0:15,0:15:39.13:0,39,642	0/0:17,0:17:29.45:0,29,279	0/0:24,0:24:36.23:0,36,369	0/0:23,0:23:45.46:0,45,410	1/1:4,19:23:45.14:568,45,0	1/1:10,17:27:36.11:454,36,0	1/1:1,15:16:33.11:416,33,0	0/0:17,0:16:10.66:0,11,675	0/0:26,0:26:51.51:0,52,543	0/0:29,0:29:53.35:0,53,510	0/0:9,0:9:21.01:0,21,206
chr10	101141622	.	G	GTCCTGGGATCCAC	31827.92	PASS	AB=0.553;AC=25;AF=0.446;AN=56;BaseQRankSum=-3.704;DP=663;FS=6.004;HRun=0;HaplotypeScore=225.7725;InbreedingCoeff=0.9225;MQ=74.34;MQ0=0;MQRankSum=-17.283;QD=112.07;ReadPosRankSum=-1.304;VQSLOD=4.1370;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,4180	1/1:7,6:13:36.08:2001,36,0	0/0:29,0:29:75.83:0,76,2351	0/0:25,0:23:47.79:0,48,1498	0/0:29,0:29:87.27:0,87,3272	0/0:22,0:22:66.21:0,66,2588	0/0:22,0:22:66.18:0,66,2113	1/1:31,0:31:90.22:4168,90,0	0/0:18,0:18:54.17:0,54,2161	0/0:26,0:26:78.27:0,78,2978	0/0:17,0:17:48.15:0,48,1835	1/1:6,15:27:57.20:3663,57,0	0/0:22,0:22:66.23:0,66,2590	0/0:32,0:32:90.31:0,90,3456	1/1:3,10:23:45.15:2781,45,0	0/0:25,0:25:75.26:0,75,2987	0/0:26,0:26:72.20:0,72,2539	0/0:25,0:25:75.21:0,75,2829	1/1:4,8:22:66.19:3212,66,0	1/1:4,17:28:39.13:2361,39,0	1/1:3,5:16:12.04:689,12,0	1/1:5,9:20:27.05:1185,27,0	1/1:4,8:16:27.05:1174,27,0	1/1:4,10:20:30.03:1614,30,0	0/0:23,0:23:66.22:0,66,2655	0/1:5,13:26:47.69:3864,0,48	1/1:7,16:30:60.07:3693,60,0	1/1:3,7:12:21.07:1423,21,0
chr10	101142241	.	GTTGTATAGC	G	4720.46	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.534;DP=554;FS=7.283;HRun=0;HaplotypeScore=173.2319;InbreedingCoeff=0.9835;MQ=89.93;MQ0=0;MQRankSum=-11.819;QD=71.52;ReadPosRankSum=1.244;VQSLOD=4.2104;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.24:0,78,3323	0/0:10,0:10:30.09:0,30,1337	0/0:20,0:22:60.19:0,60,2072	0/0:25,0:25:62.74:0,63,2354	0/0:13,0:13:39.13:0,39,1703	0/0:16,0:16:48.15:0,48,2107	0/0:12,0:12:33.11:0,33,1561	0/0:32,0:32:96.31:0,96,4218	0/0:12,0:12:36.12:0,36,1751	0/0:27,0:27:78.27:0,78,3670	0/0:18,0:18:54.19:0,54,2486	1/1:4,16:20:45.15:1376,45,0	0/0:25,0:25:75.24:0,75,3487	0/0:20,0:20:60.18:0,60,2649	0/0:26,0:26:78.25:0,78,3604	0/0:17,0:17:51.18:0,51,2283	0/0:29,0:29:84.29:0,84,4081	0/0:26,0:26:75.26:0,75,3540	0/0:18,0:18:51.17:0,51,2423	0/0:17,0:17:51.18:0,51,2436	0/0:19,0:19:54.19:0,54,2584	1/1:1,14:15:36.12:1094,36,0	1/1:1,15:17:45.15:1354,45,0	1/1:1,13:14:30.10:897,30,0	0/0:26,0:26:78.27:0,78,3755	0/0:26,0:26:75.26:0,75,3534	0/0:23,0:23:63.22:0,63,3000	0/0:3,0:3:9.03:0,9,438
chr10	101142466	.	C	CT	4202.37	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=14.854;DP=741;FS=1.782;HRun=2;HaplotypeScore=97.0338;InbreedingCoeff=0.9983;MQ=81.37;MQ0=0;MQRankSum=-1.491;QD=36.54;ReadPosRankSum=2.154;VQSLOD=4.0367;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,171,2075	0/0:9,0:9:24.07:0,24,297	0/0:22,0:22:63.14:0,63,718	0/0:18,1:19:40.73:0,41,540	0/0:21,0:21:60.19:0,60,743	0/0:18,0:18:48.15:0,48,594	0/0:29,0:29:81.24:0,81,992	0/0:34,0:34:96.25:0,96,1154	0/0:24,0:24:66.19:0,66,804	0/0:29,0:29:87.26:0,87,1059	0/0:31,0:31:87.25:0,87,1055	1/1:0,34:34:84.28:1208,84,0	0/0:26,0:26:72.21:0,72,874	0/0:25,0:25:75.14:0,75,885	0/0:19,0:19:51.16:0,51,631	0/0:36,0:36:99:0,108,1338	0/0:31,0:31:93.29:0,93,1152	0/0:27,0:27:81.25:0,81,1004	0/0:24,0:24:69.18:0,69,821	0/0:32,0:32:93.28:0,93,1139	0/0:32,0:32:93.29:0,93,1151	1/1:0,22:22:63.13:860,63,0	1/1:1,27:28:60.15:839,60,0	1/1:0,31:31:90.30:1295,90,0	0/0:25,0:25:72.16:0,72,861	0/0:19,0:19:57.15:0,57,673	0/0:29,0:28:87.26:0,87,1064	0/0:8,0:8:21.07:0,21,260
chr10	101142592	.	A	AG	4697.49	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=14.407;DP=766;FS=0.000;HRun=0;HaplotypeScore=92.8935;InbreedingCoeff=0.9996;MQ=88.30;MQ0=0;MQRankSum=-3.926;QD=43.90;ReadPosRankSum=2.683;VQSLOD=4.9116;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:60:99:0,181,2513	0/0:14,0:14:42.14:0,42,587	0/0:35,0:35:99:0,102,1379	0/0:21,0:21:54.04:0,54,717	0/0:24,0:24:72.22:0,72,987	0/0:23,0:23:69.23:0,69,965	0/0:26,0:26:78.26:0,78,1089	0/0:29,0:29:81.25:0,81,1103	0/0:35,0:35:99:0,99,1365	0/0:22,0:22:66.22:0,66,923	0/0:21,0:21:63.19:0,63,863	1/1:0,29:29:81.28:1295,81,0	0/0:36,0:36:99:0,105,1468	0/0:30,0:30:87.26:0,87,1180	0/0:24,0:24:69.23:0,69,965	0/0:35,0:35:96.31:0,96,1325	0/0:29,0:29:81.23:0,81,1095	0/0:9,0:9:27.09:0,27,378	0/0:32,0:32:96.32:0,96,1341	0/0:22,0:22:66.22:0,66,923	0/0:36,0:36:99:0,108,1489	1/1:0,22:22:57.19:910,57,0	1/1:1,23:24:63.21:1006,63,0	1/1:0,32:31:93.32:1487,93,0	0/0:21,0:21:63.21:0,63,881	0/0:28,0:28:81.27:0,81,1133	0/0:36,0:35:99:0,108,1489	0/0:10,0:10:30.10:0,30,419
chr10	101142946	.	ATTT	A	3144.73	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.778;DP=667;FS=2.212;HRun=4;HaplotypeScore=105.9606;InbreedingCoeff=0.9973;MQ=85.04;MQ0=0;MQRankSum=-7.920;QD=40.84;ReadPosRankSum=1.739;VQSLOD=2.3999;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.27:0,78,1836	0/0:16,0:16:48.16:0,48,1135	0/0:27,0:27:66.27:0,66,1655	0/0:16,0:16:48.13:0,48,902	0/0:26,0:26:78.27:0,78,1827	0/0:27,0:27:81.26:0,81,1826	0/0:21,0:21:63.22:0,63,1490	0/0:28,0:28:75.26:0,75,1694	0/0:25,0:25:75.26:0,75,1774	0/0:29,0:29:87.30:0,87,2054	0/0:21,0:21:63.22:0,63,1428	1/1:1,12:13:27.09:475,27,0	0/0:27,0:27:81.28:0,81,1883	0/0:27,0:27:78.25:0,78,1741	0/0:22,0:22:57.20:0,57,1348	0/0:23,0:23:69.24:0,69,1615	0/0:30,0:30:90.31:0,90,2087	0/0:21,0:21:63.22:0,63,1423	0/0:26,0:26:78.26:0,78,1753	0/0:29,0:29:87.30:0,87,2058	0/0:20,0:20:60.20:0,60,1354	1/1:0,32:32:78.27:1371,78,0	1/1:0,25:25:66.22:1159,66,0	1/1:0,7:7:18.06:299,18,0	0/0:21,0:21:63.22:0,63,1479	0/0:35,0:35:99:0,102,2397	0/0:37,0:37:99:0,111,2571	0/0:10,0:10:30.10:0,30,710
chr10	101143033	.	AC	A	561.06	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.574;DP=672;FS=0.000;HRun=1;HaplotypeScore=109.4641;InbreedingCoeff=0.9911;MQ=83.61;MQ0=0;MQRankSum=-12.486;QD=7.90;ReadPosRankSum=2.797;VQSLOD=0.8846;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.24:0,69,1100	0/0:11,0:11:33.11:0,33,528	0/0:22,0:22:66.22:0,66,1032	0/0:20,0:20:53.77:0,54,817	0/0:36,0:36:99:0,108,1722	0/0:29,0:29:87.30:0,87,1386	0/0:30,0:30:90.27:0,90,1386	0/0:34,0:34:99:0,102,1602	0/0:19,0:19:57.19:0,57,907	0/0:31,0:31:93.32:0,93,1486	0/0:29,0:29:87.28:0,87,1361	1/1:2,23:25:64.08:310,64,0	0/0:29,0:29:87.30:0,87,1381	0/0:28,0:28:84.29:0,84,1329	0/0:25,0:25:75.24:0,75,1175	0/0:25,0:24:75.23:0,75,1172	0/0:26,0:26:78.27:0,78,1236	0/0:13,0:13:39.13:0,39,619	0/0:17,0:17:51.17:0,51,810	0/0:31,0:31:93.32:0,93,1480	0/0:22,0:22:63.19:0,63,972	1/1:2,20:22:42.19:191,42,0	1/1:2,15:17:35.75:162,36,0	1/1:0,7:7:12.27:57,12,0	0/0:30,0:30:90.30:0,90,1413	0/0:36,0:36:99:0,108,1725	0/0:27,0:27:81.25:0,81,1270	0/0:8,0:8:24.02:0,24,332
chr10	101143035	.	T	TGA	1729.06	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.426;DP=684;FS=4.333;HRun=0;HaplotypeScore=123.9970;InbreedingCoeff=0.9846;MQ=83.10;MQ0=0;MQRankSum=-13.252;QD=22.17;ReadPosRankSum=0.892;VQSLOD=4.3682;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.18:0,78,1168	0/0:11,0:11:33.11:0,33,537	0/0:23,0:23:69.15:0,69,993	0/0:19,0:19:51.03:0,51,756	0/0:39,0:39:99:0,111,1782	0/0:29,0:29:87.27:0,87,1371	0/0:29,0:29:87.26:0,87,1349	0/0:34,0:34:96.27:0,96,1416	0/0:21,0:21:57.16:0,57,879	0/0:31,0:31:93.31:0,93,1475	0/0:28,0:28:84.26:0,84,1319	1/1:4,23:27:68.91:745,69,0	0/0:30,0:30:90.25:0,90,1349	0/0:27,0:27:81.24:0,81,1247	0/0:25,0:25:75.26:0,75,1216	0/0:26,0:25:75.25:0,75,1196	0/0:27,0:27:75.21:0,75,1148	0/0:13,0:13:39.11:0,39,590	0/0:17,0:17:48.14:0,48,735	0/0:32,0:32:93.28:0,93,1442	0/0:22,0:22:66.09:0,66,944	1/1:4,20:24:57.66:588,58,0	1/1:5,15:20:39.51:409,40,0	1/1:0,7:7:9.75:144,10,0	0/0:28,0:28:84.27:0,84,1345	0/0:35,0:35:99:0,105,1689	0/0:27,0:27:81.28:0,81,1315	0/0:7,0:7:21.07:0,21,339
chr10	101143062	.	G	GTGCTTA	8568.62	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=15.144;DP=711;FS=2.410;HRun=0;HaplotypeScore=174.6534;InbreedingCoeff=0.9907;MQ=78.82;MQ0=0;MQRankSum=-14.916;QD=90.20;ReadPosRankSum=-2.900;VQSLOD=5.5326;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,2512	0/0:9,0:9:27.09:0,27,649	0/0:21,0:21:60.21:0,60,1431	0/0:15,0:15:41.63:0,42,892	0/0:43,0:43:99:0,123,2873	0/0:29,0:29:84.27:0,84,1945	0/0:27,0:27:81.28:0,81,1933	0/0:39,0:39:99:0,105,2446	0/0:22,0:22:57.18:0,57,1320	0/0:31,0:31:90.31:0,90,2161	0/0:20,0:20:60.21:0,60,1417	1/1:11,22:33:99:3141,99,0	0/0:24,0:24:69.24:0,69,1659	0/0:28,0:28:78.25:0,78,1828	0/0:30,0:30:84.29:0,84,2016	0/0:27,0:26:81.25:0,81,1845	0/0:26,0:26:72.25:0,72,1698	0/0:14,0:14:38.49:0,38,926	0/0:14,0:14:39.13:0,39,935	0/0:29,0:29:84.29:0,84,1993	0/0:31,0:31:84.27:0,84,1930	1/1:13,16:29:84.28:2553,84,0	1/1:8,19:27:78.27:2585,78,0	1/1:6,0:6:12.04:290,12,0	0/0:24,0:24:72.22:0,72,1681	0/0:38,0:38:99:0,108,2595	0/0:29,0:29:75.24:0,75,1754	0/0:9,0:9:27.09:0,27,649
chr10	101143619	.	ATATATATATATG	A	3015.69	PASS	AB=0.778;AC=18;AF=0.360;AN=50;BaseQRankSum=7.195;DP=207;FS=10.042;HRun=0;HaplotypeScore=85.3893;InbreedingCoeff=0.6300;MQ=72.47;MQ0=2;MQRankSum=-6.298;QD=35.48;ReadPosRankSum=-1.011;VQSLOD=1.8616;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:1.64:42,2,0	./.	0/0:8,0:5:7.89:0,8,56	0/0:15,0:8:3.48:0,3,92	0/0:7,0:7:15.05:0,15,576	0/0:11,0:11:30.10:0,30,1361	0/0:4,0:4:3.01:0,3,181	1/1:6,15:21:45.15:714,45,0	0/0:5,0:5:9.03:0,9,446	0/0:5,0:5:12.04:0,12,532	0/0:5,0:5:12.04:0,12,591	0/0:10,0:10:12.50:0,13,130	0/0:4,0:4:9.03:0,9,385	0/0:3,0:3:9.03:0,9,396	1/1:2,4:6:6.02:217,6,0	1/1:3,6:9:12.04:287,12,0	0/0:19,0:19:54.19:0,54,2587	0/0:15,0:15:39.13:0,39,1546	1/1:2,13:15:39.11:854,39,0	1/1:1,3:4:3.01:108,3,0	./.	0/1:3,0:2:0:0,0,0	0/0:2,0:2:5.05:0,5,39	./.	0/0:6,0:6:15.05:0,15,779	0/1:2,8:10:99:384,0,114	1/1:2,8:10:15.05:469,15,0	1/1:0,1:1:3.01:108,3,0
chr10	101143625	.	ATATATG	A	1348.77	PASS	AB=1.000;AC=23;AF=0.460;AN=50;BaseQRankSum=8.503;DP=191;FS=2.568;HRun=0;HaplotypeScore=63.0513;InbreedingCoeff=0.6525;MQ=68.52;MQ0=4;MQRankSum=-6.729;QD=15.68;ReadPosRankSum=1.196;VQSLOD=2.5997;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:0.81:40,1,0	./.	0/0:8,0:5:5.90:0,6,38	0/0:14,0:6:2.81:0,3,24	0/0:6,0:6:18:0,18,386	0/0:10,0:10:30.09:0,30,825	0/0:4,0:4:6.02:0,6,178	1/1:17,0:17:18.36:138,18,0	0/0:3,0:3:9.03:0,9,315	0/0:6,0:6:15.05:0,15,422	0/0:5,0:5:15.03:0,15,389	1/1:4,3:7:18.05:351,18,0	0/0:5,0:5:12.03:0,12,276	0/0:3,0:3:9.03:0,9,282	1/1:5,0:5:6.02:85,6,0	1/1:6,0:6:6.02:85,6,0	0/0:19,0:19:57.16:0,57,1641	0/0:14,0:14:39.09:0,39,1018	1/1:15,0:14:20.56:253,21,0	1/1:3,0:3:3.01:42,3,0	./.	1/1:2,1:2:3.01:51,3,0	1/1:1,1:2:6.02:137,6,0	./.	0/0:5,0:5:15.05:0,15,467	0/1:10,0:10:90.10:132,0,90	1/1:9,0:9:12.51:171,13,0	1/1:2,0:1:3.01:42,3,0
chr10	101143671	.	GTA	G	230.21	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.429;DP=272;FS=11.788;HRun=0;HaplotypeScore=53.4779;InbreedingCoeff=0.7633;MQ=70.71;MQ0=0;MQRankSum=-1.904;QD=14.39;ReadPosRankSum=0.394;VQSLOD=2.2691;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:6.02:0,6,66	0/0:3,0:3:9.03:0,9,164	0/0:9,0:7:21.04:0,21,279	0/0:13,0:7:10.72:0,11,146	0/0:15,0:15:45.12:0,45,751	0/0:11,0:11:30.04:0,30,419	0/0:4,0:4:12.04:0,12,220	0/0:27,0:27:69.14:0,69,1057	0/0:11,0:11:30.10:0,30,542	0/0:12,0:12:36.11:0,36,606	0/0:8,0:8:24.07:0,24,409	1/1:0,4:4:9.03:128,9,0	0/0:7,0:7:21.07:0,21,384	0/0:11,0:11:33.07:0,33,507	0/0:9,0:9:24.07:0,24,396	0/0:8,0:8:21.06:0,21,354	0/0:20,0:20:57.16:0,57,943	0/0:10,0:10:27.07:0,27,461	0/0:17,0:17:42.14:0,42,760	0/0:4,0:4:12.04:0,12,219	0/0:1,0:1:3.01:0,3,55	1/1:1,4:5:6.02:86,6,0	1/1:0,5:5:8.99:106,9,0	1/1:0,2:2:3.01:43,3,0	0/0:8,0:8:21.07:0,21,384	0/0:10,0:10:30.09:0,30,517	0/0:17,0:17:51.07:0,51,746	0/0:9,0:9:24.06:0,24,407
chr10	101144010	.	TTTCAC	T	9653.18	PASS	AB=0.532;AC=17;AF=0.304;AN=56;BaseQRankSum=11.497;DP=499;FS=6.271;HRun=0;HaplotypeScore=107.3098;InbreedingCoeff=0.9033;MQ=64.72;MQ0=0;MQRankSum=-11.178;QD=56.12;ReadPosRankSum=-1.391;VQSLOD=5.0737;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.13:0,39,1213	1/1:2,10:12:24.08:535,24,0	0/0:12,0:11:27.46:0,27,551	0/0:5,0:4:9.03:0,9,276	0/0:28,0:28:84.29:0,84,2711	0/0:28,0:28:81.23:0,81,2538	0/0:13,0:13:39.13:0,39,1224	1/1:3,33:36:99:2195,99,0	0/0:16,0:16:48.16:0,48,1550	0/0:25,0:25:72.24:0,72,2259	0/0:16,0:16:48.16:0,48,1528	0/0:20,0:20:51.18:0,51,1607	0/0:18,0:18:54.19:0,54,1633	0/0:17,0:17:48.14:0,48,1347	1/1:1,17:18:51.18:1123,51,0	0/0:19,0:19:57.20:0,57,1841	0/0:20,0:20:60.21:0,60,1930	0/0:14,0:14:42.14:0,42,1280	1/1:3,20:23:57.19:1142,57,0	1/1:2,14:16:42.07:858,42,0	1/1:0,16:16:41.97:836,42,0	0/0:15,0:15:42.13:0,42,1240	0/0:18,0:18:54.13:0,54,1519	0/0:13,0:12:36.12:0,36,1156	0/0:17,0:17:51.18:0,51,1642	0/1:3,22:25:99:1294,0,122	1/1:0,21:21:60.21:1337,60,0	1/1:0,5:5:15.05:334,15,0
chr10	101144093	.	C	CTGTT	4588.58	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-7.001;DP=524;FS=3.890;HRun=0;HaplotypeScore=91.4060;InbreedingCoeff=0.9641;MQ=76.69;MQ0=0;MQRankSum=-2.356;QD=70.59;ReadPosRankSum=2.620;VQSLOD=6.7044;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.16:0,48,886	0/0:8,0:8:24.08:0,24,456	0/0:17,0:17:33.34:0,33,625	0/0:12,0:12:4.89:0,5,365	0/0:18,0:18:45.15:0,45,851	0/0:29,0:29:84.29:0,84,1593	0/0:12,0:12:33.11:0,33,625	0/0:39,0:39:99:0,108,1991	0/0:15,0:15:45.11:0,45,816	0/0:26,0:26:78.27:0,78,1478	0/0:13,0:13:39.13:0,39,740	1/1:1,16:17:42.14:1133,42,0	0/0:19,0:19:57.20:0,57,1082	0/0:19,0:19:57.17:0,57,1031	0/0:19,0:19:51.17:0,51,958	0/0:23,0:23:69.23:0,69,1279	0/0:19,0:19:54.06:0,54,852	0/0:10,0:10:30.07:0,30,529	0/0:27,0:27:78.27:0,78,1461	0/0:23,0:23:57.17:0,57,1018	0/0:16,0:16:36.12:0,36,683	1/1:2,9:12:33.07:785,33,0	1/1:0,16:17:48.16:1293,48,0	1/1:1,18:19:51.18:1377,51,0	0/0:21,0:21:60.19:0,60,1107	0/0:23,0:23:57.20:0,57,1080	0/0:24,0:24:72.25:0,72,1350	0/0:11,0:11:33.11:0,33,627
chr10	101144333	.	TTCCTGAGC	T	1541.92	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.809;DP=573;FS=7.140;HRun=0;HaplotypeScore=143.2978;InbreedingCoeff=0.9136;MQ=80.80;MQ0=0;MQRankSum=-7.709;QD=48.19;ReadPosRankSum=0.385;VQSLOD=3.1071;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.15:0,45,1932	0/0:8,0:8:24.08:0,24,1032	0/0:27,0:27:66.22:0,66,2404	0/0:17,0:17:36.10:0,36,1117	0/0:21,0:21:51.18:0,51,2191	0/0:37,0:37:99:0,105,4472	0/0:22,0:22:57.18:0,57,2284	0/0:37,0:36:90.28:0,90,3315	0/0:35,0:35:93.29:0,93,3751	0/0:29,0:28:81.28:0,81,3378	0/0:11,0:11:24.02:0,24,805	1/1:0,11:11:30.10:798,30,0	0/0:31,0:31:87.28:0,87,3592	0/0:22,0:22:48.16:0,48,2059	0/0:23,0:23:69.24:0,69,2849	0/0:24,0:24:57.20:0,57,2331	0/0:15,0:15:42.11:0,42,1594	0/0:7,0:7:18.06:0,18,756	0/0:19,0:19:54.19:0,54,2272	0/0:25,0:25:75.25:0,75,2916	0/0:24,0:24:57.20:0,57,2253	1/1:3,3:6:6.02:162,6,0	1/1:0,9:9:27.09:686,27,0	1/1:3,3:6:3.01:40,3,0	0/0:22,0:22:60.21:0,60,2440	0/0:30,0:30:75.26:0,75,3075	0/0:27,0:27:72.25:0,72,2862	0/0:11,0:11:33.11:0,33,1319
chr10	101144411	.	CCA	C	655.23	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.170;DP=514;FS=12.096;HRun=0;HaplotypeScore=71.0622;InbreedingCoeff=0.9923;MQ=95.08;MQ0=0;MQRankSum=-8.339;QD=21.14;ReadPosRankSum=0.446;VQSLOD=3.3347;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.22:0,63,1279	0/0:9,0:9:27.09:0,27,548	0/0:21,0:21:63.20:0,63,1206	0/0:29,0:29:70.04:0,70,1432	0/0:24,0:24:69.24:0,69,1401	0/0:24,0:24:69.22:0,69,1350	0/0:22,0:22:66.23:0,66,1325	0/0:35,0:34:99:0,105,2092	0/0:23,0:23:69.24:0,69,1401	0/0:17,0:17:51.17:0,51,969	0/0:16,0:16:48.16:0,48,974	1/1:0,7:7:21.04:204,21,0	0/0:23,0:23:69.22:0,69,1364	0/0:18,0:18:54.19:0,54,1096	0/0:25,0:25:75.26:0,75,1523	0/0:28,0:28:84.29:0,84,1692	0/0:15,0:15:42.14:0,42,850	0/0:9,0:9:27.09:0,27,548	0/0:17,0:17:51.16:0,51,954	0/0:17,0:17:51.16:0,51,997	0/0:15,0:15:45.15:0,45,899	1/1:0,9:9:27.04:257,27,0	1/1:0,8:8:24:219,24,0	1/1:0,7:7:14.99:133,15,0	0/0:14,0:14:42.14:0,42,819	0/0:32,0:32:96.32:0,96,1902	0/0:20,0:20:60.19:0,60,1181	0/0:9,0:9:24.02:0,24,409
chr10	101144414	.	TAG	T	679.85	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.312;DP=513;FS=12.057;HRun=0;HaplotypeScore=71.2150;InbreedingCoeff=0.9912;MQ=92.52;MQ0=0;MQRankSum=-8.327;QD=21.25;ReadPosRankSum=0.016;VQSLOD=3.2902;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.23:0,66,1340	0/0:9,0:9:27.09:0,27,548	0/0:18,0:18:54.19:0,54,1075	0/0:27,0:27:42.33:0,42,1365	0/0:25,0:25:72.25:0,72,1462	0/0:23,0:23:66.23:0,66,1307	0/0:23,0:23:69.24:0,69,1374	0/0:37,0:36:99:0,111,2147	0/0:25,0:25:75.24:0,75,1449	0/0:16,0:16:48.16:0,48,961	0/0:18,0:18:54.19:0,54,1095	1/1:1,7:8:24.03:229,24,0	0/0:22,0:22:66.23:0,66,1341	0/0:18,0:18:54.19:0,54,1097	0/0:25,0:25:75.26:0,75,1521	0/0:29,0:29:87.30:0,87,1768	0/0:16,0:16:48.09:0,48,861	0/0:9,0:9:27.09:0,27,548	0/0:17,0:17:48.15:0,48,925	0/0:16,0:16:48.16:0,48,957	0/0:16,0:16:48.14:0,48,888	1/1:0,9:9:27.04:257,27,0	1/1:0,8:8:24:219,24,0	1/1:0,7:7:14.99:133,15,0	0/0:13,0:13:39.13:0,39,748	0/0:31,0:31:93.32:0,93,1886	0/0:19,0:19:57.20:0,57,1157	0/0:7,0:7:18.06:0,18,366
chr10	101144613	.	TATTTAATTTTA	T	4161.20	PASS	AB=0.692;AC=15;AF=0.278;AN=54;BaseQRankSum=8.117;DP=280;FS=0.000;HRun=0;HaplotypeScore=107.8629;InbreedingCoeff=0.7317;MQ=78.34;MQ0=0;MQRankSum=-5.583;QD=40.40;ReadPosRankSum=0.207;VQSLOD=3.0889;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:21.07:0,21,997	./.	0/0:11,0:10:8.82:0,9,154	0/0:12,0:11:9.03:0,9,309	0/0:11,0:11:21.06:0,21,894	0/0:13,0:13:30.10:0,30,1584	0/0:11,0:11:21.07:0,21,1034	1/1:12,12:24:36.09:935,36,0	0/0:4,0:4:6.02:0,6,313	0/0:9,0:9:12.04:0,12,379	0/0:11,0:11:24.06:0,24,905	0/0:4,0:4:9.03:0,9,496	0/0:13,0:13:18.04:0,18,659	0/0:3,0:3:9.03:0,9,496	1/1:9,8:17:18.06:599,18,0	0/0:12,0:12:18.03:0,18,624	0/0:16,0:16:33.11:0,33,1742	0/0:10,0:10:24.08:0,24,1234	1/1:5,5:10:12.03:296,12,0	1/1:2,14:15:33.11:966,33,0	1/1:3,2:5:6.02:185,6,0	0/0:4,0:4:9.03:0,9,387	0/0:7,0:7:3.01:0,3,38	0/0:2,0:2:6.02:0,6,329	0/0:12,0:12:36.10:0,36,1677	0/1:10,8:18:99:682,0,138	1/1:5,5:10:9.03:299,9,0	1/1:1,2:3:6.02:200,6,0
chr10	101144786	.	ATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	A	2505.95	PASS	AB=1.000;AC=11;AF=0.324;AN=34;BaseQRankSum=4.853;DP=162;FS=0.000;HRun=0;HaplotypeScore=140.1886;InbreedingCoeff=0.7010;MQ=47.76;MQ0=17;MQRankSum=-4.421;QD=51.14;ReadPosRankSum=3.742;VQSLOD=2.3500;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,2:4:6.02:651,6,0	./.	./.	0/0:9,0:9:17.74:0,18,2397	0/0:7,0:7:11.99:0,12,1909	0/0:7,0:6:15.94:0,16,1938	0/1:21,0:20:0:0,0,0	0/0:7,0:7:18.06:0,18,2195	0/0:5,0:3:9.03:0,9,1115	0/0:6,0:6:10.28:0,10,1560	./.	0/0:3,0:3:6.02:0,6,668	0/0:4,0:4:9.03:0,9,1091	1/1:0,2:2:3.01:325,3,0	1/1:4,1:3:3.01:325,3,0	0/0:25,0:24:60.14:0,60,7650	0/0:12,0:11:33.06:0,33,4130	./.	./.	./.	./.	./.	./.	0/0:7,0:7:15.02:0,15,1824	1/1:4,4:7:9.02:677,9,0	1/1:5,4:7:6.02:651,6,0	./.
chr10	101145454	.	G	GAAA	6666.13	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-2.378;DP=568;FS=1.188;HRun=10;HaplotypeScore=103.0180;InbreedingCoeff=0.9746;MQ=75.81;MQ0=0;MQRankSum=-5.445;QD=31.44;ReadPosRankSum=-4.410;VQSLOD=3.2852;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:24:43.32:418,43,0	1/1:0,6:7:21.07:385,21,0	0/0:15,0:16:9.71:0,10,228	0/0:13,0:14:26.78:0,27,279	0/0:29,0:29:57.07:0,57,691	0/0:31,0:33:74.82:0,75,930	0/0:17,0:19:40.44:0,40,495	1/1:22,13:37:72.13:1157,72,0	0/0:18,0:19:57.11:0,57,675	0/0:22,0:23:57.06:0,57,664	0/0:25,0:25:69.20:0,69,839	0/0:19,0:21:35.80:0,36,325	0/0:28,0:28:44.22:0,44,778	0/0:22,0:22:57.15:0,57,693	1/1:4,10:18:31.33:511,31,0	0/0:14,0:14:36.09:0,36,438	0/0:14,0:14:36.07:0,36,422	0/0:17,0:17:51.16:0,51,619	1/1:8,15:23:61.69:972,62,0	1/1:7,12:23:45.03:646,45,0	1/1:10,8:20:21.04:337,21,0	0/0:10,0:11:9.62:0,10,158	0/0:15,0:15:29.73:0,30,244	0/0:18,0:18:38.33:0,38,299	0/0:18,0:18:48.14:0,48,583	1/1:5,17:22:52.41:932,52,0	1/1:7,22:34:64.44:1150,64,0	1/1:0,2:3:9.03:158,9,0
chr10	101145682	.	C	CCCTG	1558.95	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.554;DP=469;FS=1.796;HRun=0;HaplotypeScore=97.5234;InbreedingCoeff=0.8985;MQ=77.70;MQ0=0;MQRankSum=-6.311;QD=25.56;ReadPosRankSum=0.089;VQSLOD=3.5783;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.24:0,69,1304	0/0:2,0:2:6.02:0,6,118	0/0:25,0:25:58.64:0,59,1008	0/0:33,0:30:57.42:0,57,1240	0/0:13,0:13:39.13:0,39,748	0/0:11,0:11:30.10:0,30,588	0/0:22,0:22:66.20:0,66,1229	0/0:24,0:24:69.22:0,69,1219	0/0:18,0:18:54.15:0,54,969	0/0:11,0:11:33.10:0,33,600	0/0:12,0:12:36.12:0,36,690	1/1:0,13:20:42.14:1147,42,0	0/0:25,0:25:75.26:0,75,1447	0/0:19,0:19:57.18:0,57,1064	0/0:15,0:15:45.14:0,45,833	0/0:12,0:12:36.12:0,36,706	0/0:14,0:14:42.11:0,42,754	0/0:8,0:8:24.05:0,24,413	0/0:11,0:11:33.10:0,33,563	0/0:14,0:14:39.13:0,39,755	0/0:31,0:31:93.30:0,93,1737	1/1:0,7:12:5.87:168,6,0	1/1:0,7:11:5.95:74,6,0	1/1:1,10:18:11.95:312,12,0	0/0:11,0:11:33.11:0,33,611	0/0:22,0:22:66.23:0,66,1281	0/0:21,0:20:63.10:0,63,1122	0/0:9,0:9:27.02:0,27,481
chr10	101145788	.	G	GC	967.16	PASS	AB=0.955;AC=9;AF=0.167;AN=54;BaseQRankSum=8.756;DP=346;FS=15.772;HRun=2;HaplotypeScore=55.6772;InbreedingCoeff=0.8303;MQ=80.62;MQ0=0;MQRankSum=-2.366;QD=17.27;ReadPosRankSum=-2.431;VQSLOD=1.9332;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.18:0,72,852	0/0:5,0:5:9.03:0,9,111	0/1:19,0:19:24.47:24,0,251	0/0:21,0:16:38.74:0,39,393	0/0:6,0:6:15.05:0,15,186	0/0:10,0:10:30.09:0,30,372	0/0:18,0:18:54.16:0,54,656	0/0:10,0:10:27.08:0,27,334	0/0:16,0:16:48.15:0,48,594	0/0:15,0:15:39.12:0,39,484	0/0:10,0:10:30.09:0,30,371	1/1:2,5:7:18.05:241,18,0	0/0:9,0:9:27.08:0,27,334	0/0:21,0:21:63.20:0,63,780	0/0:12,0:12:33.08:0,33,386	0/0:11,0:11:33.07:0,33,393	0/0:20,0:20:57.18:0,57,706	0/0:9,0:9:27.06:0,27,319	0/0:3,0:3:9.03:0,9,112	0/0:19,0:19:51.15:0,51,622	0/0:18,0:18:54.17:0,54,669	1/1:1,8:9:24.08:339,24,0	1/1:1,6:7:21.02:261,21,0	1/1:5,7:12:21.04:264,21,0	0/0:10,0:10:30.03:0,30,341	0/0:14,0:14:39.12:0,39,483	0/0:8,0:8:24.07:0,24,287	./.
chr10	101145824	.	AT	A	1201.46	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=7.251;DP=389;FS=26.936;HRun=2;HaplotypeScore=48.7187;InbreedingCoeff=0.9943;MQ=79.13;MQ0=0;MQRankSum=-3.986;QD=29.30;ReadPosRankSum=0.481;VQSLOD=1.7351;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.19:0,57,777	0/0:7,0:7:21.07:0,21,312	0/0:15,0:15:42.03:0,42,566	0/0:13,0:13:38.86:0,39,508	0/0:10,0:10:30.05:0,30,403	0/0:11,0:11:33.11:0,33,494	0/0:15,0:15:45.14:0,45,655	0/0:15,0:15:45.14:0,45,638	0/0:21,0:21:63.20:0,63,924	0/0:18,0:18:54.18:0,54,808	0/0:18,0:18:54.18:0,54,799	1/1:0,14:14:42.14:544,42,0	0/0:11,0:11:33.10:0,33,474	0/0:18,0:18:54.18:0,54,809	0/0:12,0:12:36.12:0,36,539	0/0:11,0:11:33.11:0,33,494	0/0:27,0:27:81.26:0,81,1189	0/0:15,0:15:45.15:0,45,674	0/0:12,0:12:36.10:0,36,517	0/0:12,0:12:33.11:0,33,490	0/0:17,0:17:48.14:0,48,680	1/1:0,7:7:18.06:233,18,0	1/1:0,11:11:21.07:272,21,0	1/1:1,8:9:24.08:310,24,0	0/0:13,0:13:39.11:0,39,544	0/0:16,0:16:45.15:0,45,657	0/0:20,0:19:60.19:0,60,880	./.
chr10	101146034	.	TA	T	3223.06	PASS	AB=0.800;AC=29;AF=0.518;AN=56;BaseQRankSum=10.272;DP=412;FS=0.384;HRun=10;HaplotypeScore=53.2891;InbreedingCoeff=0.8878;MQ=74.82;MQ0=0;MQRankSum=-0.332;QD=17.42;ReadPosRankSum=0.330;VQSLOD=3.9261;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.17:0,69,753	1/1:1,4:5:12:104,12,0	0/1:9,3:12:50.13:50,0,166	0/0:8,0:8:15.04:0,15,161	0/0:23,0:23:60.16:0,60,664	0/0:16,0:16:48.13:0,48,531	0/0:18,0:18:36.07:0,36,381	1/1:2,20:22:59.98:521,60,0	0/0:17,0:17:51.12:0,51,555	0/0:17,0:17:45.12:0,45,498	0/0:19,0:19:48.13:0,48,531	1/1:1,0:10:18.33:54,18,0	0/0:16,0:16:39.11:0,39,430	0/0:15,0:15:42.11:0,42,465	1/1:0,13:14:41.03:345,41,0	1/1:0,15:15:41.99:365,42,0	0/0:21,0:21:51.14:0,51,564	0/0:16,0:16:45.10:0,45,487	1/1:1,18:19:53.99:469,54,0	1/1:1,14:15:41.99:365,42,0	1/1:1,7:8:21:182,21,0	1/1:2,0:8:10.18:30,10,0	1/1:1,0:10:16.29:48,16,0	1/1:0,0:4:4.07:12,4,0	0/0:18,0:18:51.14:0,51,564	1/1:4,14:18:11.81:331,12,0	1/1:2,17:19:47.94:417,48,0	1/1:0,6:6:18:156,18,0
chr10	101146073	.	C	CA	770.36	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=1.238;DP=414;FS=7.047;HRun=4;HaplotypeScore=51.7479;InbreedingCoeff=0.9585;MQ=76.09;MQ0=0;MQRankSum=-3.794;QD=26.56;ReadPosRankSum=-0.043;VQSLOD=2.1083;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.20:0,69,782	0/0:6,0:6:15.04:0,15,170	0/0:13,0:13:39.06:0,39,414	0/0:8,0:8:21.05:0,21,229	0/0:16,0:16:39.11:0,39,442	0/0:17,0:17:51.15:0,51,579	0/0:15,0:15:45.13:0,45,507	0/0:32,0:32:90.25:0,90,1020	0/0:15,0:15:42.12:0,42,476	0/0:17,0:17:48.14:0,48,544	0/0:21,0:21:57.16:0,57,646	1/1:2,9:11:27.05:348,27,0	0/0:10,0:10:27.06:0,27,295	0/0:12,0:12:33.08:0,33,364	0/0:14,0:14:39.11:0,39,442	0/0:8,0:8:21.06:0,21,238	0/0:19,0:19:51.15:0,51,578	0/0:18,0:18:51.15:0,51,578	0/0:17,0:17:51.15:0,51,578	0/0:17,0:17:45.13:0,45,511	0/0:9,0:9:27.08:0,27,306	1/1:1,3:4:9.03:123,9,0	1/1:1,8:9:24.08:327,24,0	1/1:1,4:5:9.03:123,9,0	0/0:25,0:25:75.21:0,75,851	0/0:22,0:22:63.18:0,63,714	0/0:16,0:16:45.11:0,45,500	0/0:14,0:14:39.11:0,39,442
chr10	101147090	.	TAAGAAAGG	T	1992.33	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.719;DP=593;FS=29.518;HRun=0;HaplotypeScore=166.8602;InbreedingCoeff=0.9935;MQ=93.73;MQ0=0;MQRankSum=-7.515;QD=73.79;ReadPosRankSum=-1.294;VQSLOD=1.9343;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:72.25:2087,72,0	0/0:8,0:8:24.08:0,24,1044	0/0:27,0:27:78.27:0,78,3049	0/0:27,0:27:73.90:0,74,3004	0/0:17,0:17:48.16:0,48,2031	0/0:24,0:24:72.25:0,72,3094	0/0:11,0:11:33.11:0,33,1472	0/0:27,0:27:78.27:0,78,3473	0/0:14,0:14:42.14:0,42,1885	0/0:24,0:24:69.24:0,69,3092	0/0:12,0:12:36.12:0,36,1631	0/0:25,0:25:72.25:0,72,3235	0/0:24,0:24:72.25:0,72,3261	0/0:17,0:17:48.16:0,48,2121	0/0:20,0:20:60.21:0,60,2564	0/0:24,0:24:69.24:0,69,3085	0/0:30,0:30:90.29:0,90,3750	0/0:13,0:13:39.12:0,39,1655	0/0:18,0:18:51.17:0,51,2082	0/0:28,0:28:84.29:0,84,3659	0/0:36,0:36:99:0,102,4360	0/0:15,0:15:45.15:0,45,1907	0/0:23,0:23:69.19:0,69,2953	0/0:19,0:19:57.20:0,57,2424	0/0:22,0:22:63.21:0,63,2707	0/0:23,0:23:69.23:0,69,2939	0/0:31,0:31:93.32:0,93,4194	0/0:7,0:7:21.07:0,21,878
chr10	101147409	.	A	AG	2050.40	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.147;DP=676;FS=13.069;HRun=2;HaplotypeScore=106.4179;InbreedingCoeff=0.9812;MQ=79.80;MQ0=0;MQRankSum=-10.530;QD=24.12;ReadPosRankSum=1.506;VQSLOD=2.3725;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,1237	0/0:16,0:16:48.15:0,48,595	0/0:14,0:14:39.09:0,39,457	0/0:22,0:21:60.13:0,60,707	0/0:21,0:21:60.13:0,60,723	0/0:36,0:36:99:0,108,1338	0/0:22,0:22:66.14:0,66,755	0/0:37,0:37:99:0,102,1215	0/0:22,0:22:66.21:0,66,818	0/0:27,0:27:78.23:0,78,948	0/0:17,0:17:48.14:0,48,582	1/1:3,17:20:44.90:635,45,0	0/0:30,0:30:87.23:0,87,1040	0/0:26,0:26:75.22:0,75,916	0/0:26,0:26:78.23:0,78,954	0/0:31,0:31:93.29:0,93,1153	0/0:18,0:18:54.17:0,54,669	0/0:4,0:4:9.03:0,9,112	0/0:15,0:15:45.07:0,45,539	0/0:39,0:39:99:0,117,1398	0/0:30,0:30:87.26:0,87,1066	1/1:2,24:26:51.17:675,51,0	1/1:4,19:23:45.15:594,45,0	1/1:1,15:16:24.04:306,24,0	0/0:26,0:26:75.21:0,75,914	0/0:28,0:28:81.25:0,81,994	0/0:40,0:40:99:0,120,1459	0/0:6,0:6:18.03:0,18,208
chr10	101147742	.	AC	A	702.07	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.523;DP=684;FS=1.878;HRun=1;HaplotypeScore=90.5071;InbreedingCoeff=0.9985;MQ=69.86;MQ0=4;MQRankSum=-0.460;QD=33.43;ReadPosRankSum=2.207;VQSLOD=3.5976;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.23:0,69,1089	0/0:11,0:11:30.10:0,30,479	0/0:24,0:21:60.20:0,60,955	0/0:19,0:15:45.15:0,45,715	0/0:29,0:29:81.28:0,81,1294	0/0:25,0:25:75.24:0,75,1174	0/0:33,0:33:90.31:0,90,1432	0/0:42,0:41:99:0,126,1978	0/0:26,0:26:78.27:0,78,1243	0/0:29,0:29:87.30:0,87,1382	0/0:12,0:12:36.12:0,36,576	0/0:26,0:26:78.26:0,78,1167	0/0:36,0:36:99:0,108,1717	0/0:33,0:33:99:0,99,1555	0/0:19,0:19:57.19:0,57,909	0/0:27,0:27:81.28:0,81,1295	1/1:0,21:21:57.19:797,57,0	0/0:22,0:22:51.79:0,52,867	0/0:25,0:25:66.22:0,66,1023	0/0:20,0:20:60.20:0,60,959	0/0:25,0:25:72.25:0,72,1148	0/0:23,0:23:56.39:0,56,798	0/0:17,0:17:30.10:0,30,447	0/0:16,0:16:33.11:0,33,494	0/0:25,0:25:75.24:0,75,1175	0/0:32,0:32:96.33:0,96,1533	0/0:30,0:30:90.31:0,90,1436	0/0:13,0:13:39.13:0,39,623
chr10	101147872	.	A	AT	2255.26	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.652;DP=555;FS=4.407;HRun=5;HaplotypeScore=66.6155;InbreedingCoeff=0.9637;MQ=80.97;MQ0=0;MQRankSum=-3.407;QD=29.67;ReadPosRankSum=0.594;VQSLOD=4.2373;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:54.19:0,54,582	0/0:12,0:12:27.06:0,27,290	0/0:21,0:20:25.44:0,25,385	0/0:17,0:16:6.36:0,6,181	0/0:33,0:33:87.22:0,87,935	0/0:24,0:24:72.18:0,72,774	0/0:13,0:13:33.08:0,33,354	0/0:30,0:30:75.18:0,75,806	0/0:16,0:16:45.10:0,45,475	0/0:22,0:22:57.11:0,57,598	0/0:24,0:24:69.15:0,69,722	1/1:1,17:18:48.09:608,48,0	0/0:18,0:18:51.09:0,51,537	0/0:24,0:24:63.12:0,63,665	0/0:19,0:19:51.11:0,51,540	0/0:24,0:24:63.14:0,63,670	0/0:18,0:18:54.14:0,54,580	0/0:13,0:13:36.09:0,36,387	0/0:20,0:20:57.13:0,57,599	0/0:29,0:29:75.18:0,75,800	0/0:12,0:12:30.05:0,30,313	1/1:1,20:21:54.02:666,54,0	1/1:2,22:24:63.16:808,63,0	1/1:0,13:13:27:333,27,0	0/0:20,0:20:57.12:0,57,603	0/0:26,0:26:78.20:0,78,839	0/0:18,0:18:51.13:0,51,548	0/0:4,0:4:12.03:0,12,129
chr10	101148374	.	A	AT	285.38	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=2.595;DP=457;FS=1.263;HRun=5;HaplotypeScore=61.5459;InbreedingCoeff=0.9154;MQ=66.68;MQ0=0;MQRankSum=-4.003;QD=20.38;ReadPosRankSum=-0.414;VQSLOD=2.9308;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,11:14:30.08:379,30,0	0/0:8,0:8:21.05:0,21,226	0/0:5,0:5:12.03:0,12,129	0/0:6,0:6:11.93:0,12,98	0/0:21,0:21:54.14:0,54,580	0/0:15,0:15:39.09:0,39,419	0/0:9,0:9:24.06:0,24,258	0/0:43,0:43:99:0,114,1202	0/0:16,0:16:48.10:0,48,507	0/0:25,0:25:69.17:0,69,741	0/0:29,0:29:81.20:0,81,870	0/0:20,0:20:60.15:0,60,644	0/0:12,0:12:33.08:0,33,354	0/0:12,0:12:30.07:0,30,322	0/0:23,0:23:66.17:0,66,709	0/0:20,0:20:57.13:0,57,605	0/0:13,0:13:39.10:0,39,419	0/0:10,0:10:24.06:0,24,256	0/0:8,0:8:21.04:0,21,217	0/0:26,0:26:69.17:0,69,742	0/0:6,0:6:18.05:0,18,193	0/0:14,0:14:36.07:0,36,379	0/0:22,0:22:57.14:0,57,612	0/0:7,0:7:18.04:0,18,193	0/0:16,0:16:45.09:0,45,474	0/0:27,0:27:78.20:0,78,838	0/0:27,0:27:60.15:0,60,644	./.
chr10	101148388	.	AT	A	178.49	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.754;DP=442;FS=1.324;HRun=7;HaplotypeScore=64.0198;InbreedingCoeff=0.8159;MQ=68.64;MQ0=0;MQRankSum=-4.855;QD=16.23;ReadPosRankSum=-2.118;VQSLOD=3.2227;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:11:27.06:272,27,0	0/0:6,0:6:18.06:0,18,226	0/0:5,0:5:12.04:0,12,149	0/0:11,0:9:16.65:0,17,153	0/0:20,0:20:51.16:0,51,642	0/0:16,0:16:45.13:0,45,555	0/0:8,0:8:21.07:0,21,264	0/0:36,0:36:93.29:0,93,1158	0/0:15,0:15:39.11:0,39,477	0/0:26,0:26:63.19:0,63,773	0/0:25,0:25:69.21:0,69,857	0/0:19,0:19:54.16:0,54,668	0/0:11,0:11:33.11:0,33,415	0/0:13,0:13:39.12:0,39,491	0/0:24,0:24:69.22:0,69,868	0/0:16,0:16:48.15:0,48,604	0/0:11,0:11:30.10:0,30,377	0/0:14,0:14:36.12:0,36,453	0/0:14,0:14:42.13:0,42,522	0/0:27,0:27:81.26:0,81,1018	0/0:5,0:5:9.03:0,9,113	0/0:12,0:12:33.09:0,33,401	0/0:22,0:22:51.16:0,51,642	0/0:8,0:8:21.07:0,21,259	0/0:16,0:16:48.15:0,48,603	0/0:26,0:26:72.22:0,72,892	0/0:21,0:21:51.14:0,51,615	0/0:4,0:4:6.02:0,6,75
chr10	101148414	.	CAT	C	6531.68	PASS	AB=1.000;AC=27;AF=0.519;AN=52;BaseQRankSum=14.682;DP=438;FS=2.218;HRun=0;HaplotypeScore=59.5946;InbreedingCoeff=0.9145;MQ=64.26;MQ0=0;MQRankSum=-1.353;QD=28.77;ReadPosRankSum=0.252;VQSLOD=5.8904;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,2:9:6.02:79,6,0	1/1:0,9:9:24.08:316,24,0	./.	0/1:11,0:7:5.36:5,0,99	0/0:22,0:22:60.21:0,60,1029	0/0:18,0:18:48.16:0,48,823	0/0:12,0:12:36.12:0,36,611	1/1:4,28:32:84.27:1103,84,0	0/0:17,0:17:51.17:0,51,873	0/0:21,0:21:63.22:0,63,1081	0/0:28,0:28:75.26:0,75,1285	1/1:3,11:14:33.11:433,33,0	0/0:13,0:13:36.12:0,36,617	0/0:18,0:18:54.18:0,54,926	1/1:5,16:21:48.16:631,48,0	0/0:14,0:14:42.13:0,42,694	0/0:15,0:15:39.13:0,39,660	0/0:14,0:14:39.13:0,39,655	1/1:7,11:18:33.11:434,33,0	1/1:2,25:27:78.25:1025,78,0	./.	1/1:2,8:10:24.08:315,24,0	1/1:5,12:17:30.10:394,30,0	1/1:2,5:7:18.05:222,18,0	0/0:17,0:17:45.15:0,45,765	1/1:3,20:23:60.19:786,60,0	1/1:2,22:24:51.17:670,51,0	1/1:0,5:5:9.03:118,9,0
chr10	101148677	.	AG	A	217.47	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.473;DP=517;FS=1.183;HRun=2;HaplotypeScore=74.1806;InbreedingCoeff=0.9587;MQ=82.18;MQ0=1;MQRankSum=-0.486;QD=19.77;ReadPosRankSum=-0.737;VQSLOD=3.4608;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:24.08:311,24,0	0/0:4,0:4:12.03:0,12,159	0/0:18,0:18:35.05:0,35,544	0/0:14,0:14:29.61:0,30,435	0/0:20,0:20:60.20:0,60,873	0/0:24,0:24:72.20:0,72,1007	0/0:11,0:11:33.10:0,33,471	0/0:35,0:34:99:0,105,1479	0/0:16,0:15:45.15:0,45,665	0/0:29,0:29:84.28:0,84,1227	0/0:35,0:35:99:0,105,1454	0/0:12,0:12:36.11:0,36,513	0/0:20,0:20:57.15:0,57,779	0/0:16,0:16:45.15:0,45,663	0/0:22,0:22:66.16:0,66,932	0/0:21,0:21:63.20:0,63,910	0/0:18,0:18:51.17:0,51,752	0/0:17,0:17:51.13:0,51,718	0/0:19,0:19:57.18:0,57,823	0/0:19,0:19:57.16:0,57,804	0/0:10,0:10:27.08:0,27,380	0/0:18,0:18:54.16:0,54,758	0/0:15,0:15:45.12:0,45,640	0/0:25,0:25:75.22:0,75,1066	0/0:16,0:15:48.15:0,48,691	0/0:17,0:17:48.14:0,48,669	0/0:29,0:29:84.22:0,84,1162	0/0:6,0:6:18.06:0,18,265
chr10	101149195	.	TC	T	2483.77	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.917;DP=628;FS=0.000;HRun=2;HaplotypeScore=92.3806;InbreedingCoeff=0.9964;MQ=79.60;MQ0=0;MQRankSum=-2.091;QD=31.84;ReadPosRankSum=1.351;VQSLOD=3.3864;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:24.08:0,24,359	0/0:9,0:9:27.09:0,27,403	0/0:18,0:18:47.28:0,47,699	0/0:15,0:15:25.09:0,25,434	0/0:40,0:39:99:0,105,1696	0/0:24,0:24:72.23:0,72,1059	0/0:22,0:22:66.20:0,66,948	0/0:41,0:41:99:0,114,1656	0/0:19,0:19:57.19:0,57,852	0/0:36,0:36:99:0,102,1510	0/0:36,0:36:99:0,108,1597	1/1:0,16:16:45.15:584,45,0	0/0:24,0:24:72.22:0,72,1038	0/0:21,0:21:63.20:0,63,921	0/0:23,0:23:69.23:0,69,1032	0/0:24,0:24:69.21:0,69,994	0/0:36,0:36:99:0,102,1446	0/0:16,0:16:42.14:0,42,623	0/0:20,0:20:60.20:0,60,899	0/0:26,0:26:78.26:0,78,1146	0/0:17,0:17:51.16:0,51,744	1/1:1,18:19:51.17:661,51,0	1/1:0,23:23:54.18:700,54,0	1/1:1,19:20:54.18:700,54,0	0/0:19,0:19:57.14:0,57,811	0/0:18,0:18:51.17:0,51,764	0/0:32,0:32:96.30:0,96,1397	0/0:6,0:6:18.06:0,18,270
chr10	101149544	.	C	CA	1680.90	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.416;DP=569;FS=30.954;HRun=0;HaplotypeScore=68.1829;InbreedingCoeff=0.9669;MQ=95.38;MQ0=0;MQRankSum=-9.115;QD=30.02;ReadPosRankSum=-0.210;VQSLOD=1.8765;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:42.08:0,42,542	0/0:13,0:13:39.13:0,39,544	0/0:34,0:34:99:0,101,1202	0/0:23,0:22:63.18:0,63,852	0/0:31,0:31:93.21:0,93,1230	0/0:20,0:20:54.17:0,54,736	0/0:21,0:21:57.16:0,57,772	0/0:31,0:31:93.21:0,93,1235	0/0:21,0:21:63.21:0,63,879	0/0:28,0:29:87.24:0,87,1162	0/0:21,0:21:63.15:0,63,838	1/1:2,14:16:48.11:582,48,0	0/0:21,0:21:63.19:0,63,836	0/0:20,0:20:60.20:0,60,836	0/0:25,0:25:75.23:0,75,1009	0/0:30,0:30:90.27:0,90,1219	0/0:15,0:15:45.09:0,45,588	0/0:14,0:15:39.13:0,39,535	0/0:18,0:18:51.17:0,51,712	0/0:23,0:23:69.19:0,69,940	0/0:16,0:16:45.14:0,45,608	1/1:0,11:14:36.11:457,36,0	1/1:1,18:19:54.17:692,54,0	1/1:2,5:7:8.86:106,9,0	0/0:20,0:20:60.18:0,60,818	0/0:21,0:21:63.16:0,63,842	0/0:28,0:28:81.20:0,81,1082	0/0:3,0:3:9.03:0,9,125
chr10	101149548	.	G	GA	1267.50	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.507;DP=561;FS=23.475;HRun=4;HaplotypeScore=69.8285;InbreedingCoeff=0.9814;MQ=92.31;MQ0=0;MQRankSum=-8.189;QD=22.63;ReadPosRankSum=-1.966;VQSLOD=1.6514;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:30.08:0,30,340	0/0:14,0:14:42.11:0,42,468	0/0:28,0:28:78.04:0,78,848	0/0:22,0:21:57.13:0,57,625	0/0:30,0:30:84.24:0,84,950	0/0:20,0:20:60.14:0,60,654	0/0:19,0:19:57.14:0,57,628	0/0:29,0:29:75.21:0,75,849	0/0:22,0:22:66.18:0,66,739	0/0:29,0:29:72.19:0,72,807	0/0:20,0:20:54.14:0,54,602	1/1:2,14:16:45.02:434,45,0	0/0:21,0:21:60.12:0,60,651	0/0:21,0:21:60.16:0,60,670	0/0:26,0:26:78.18:0,78,857	0/0:29,0:29:81.20:0,81,899	0/0:14,0:14:42.10:0,42,464	0/0:14,0:14:36.06:0,36,393	0/0:22,0:22:63.11:0,63,658	0/0:25,0:25:75.16:0,75,808	0/0:16,0:16:48.11:0,48,524	1/1:1,11:12:35.36:326,35,0	1/1:6,14:20:53.67:504,54,0	1/1:4,4:8:17.96:163,18,0	0/0:20,0:20:60.16:0,60,672	0/0:21,0:21:57.16:0,57,645	0/0:27,0:27:75.20:0,75,841	0/0:3,0:3:9.03:0,9,102
chr10	101149751	.	GA	G	597.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.874;DP=620;FS=3.482;HRun=9;HaplotypeScore=111.7749;InbreedingCoeff=0.9273;MQ=69.37;MQ0=0;MQRankSum=-0.371;QD=18.11;ReadPosRankSum=0.854;VQSLOD=3.1342;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:20:53.99:0,54,603	0/0:12,0:12:36.08:0,36,403	0/0:14,0:12:21.04:0,21,227	0/0:9,0:10:18.95:0,19,172	0/0:31,0:31:84.25:0,84,968	0/0:30,0:30:81.24:0,81,934	0/0:10,0:11:29.89:0,30,306	0/0:25,0:25:72.21:0,72,829	0/0:31,0:31:84.23:0,84,958	0/0:31,0:31:72.20:0,72,823	0/0:27,1:28:47.76:0,48,804	0/0:20,0:20:57.11:0,57,286	0/0:27,0:27:66.15:0,66,729	0/0:27,0:27:67.08:0,67,763	0/0:30,0:30:72.21:0,72,831	1/1:3,29:33:77.07:692,77,0	0/0:14,0:14:42.12:0,42,485	0/0:8,0:9:23.90:0,24,257	0/0:19,0:20:59.76:0,60,623	0/0:30,0:30:81.24:0,81,935	0/0:20,1:21:60.18:0,60,692	0/0:23,0:24:62.65:0,63,311	0/0:23,0:25:51.73:0,52,294	0/0:11,0:10:8.52:0,9,42	0/0:22,1:23:35.72:0,36,665	0/0:24,0:24:57.15:0,57,639	0/0:28,0:28:75.22:0,75,865	0/0:10,0:10:30.09:0,30,346
chr10	101149759	.	A	AAAT	3903.81	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.071;DP=604;FS=26.037;HRun=0;HaplotypeScore=126.3200;InbreedingCoeff=0.9300;MQ=67.89;MQ0=0;MQRankSum=-10.289;QD=46.47;ReadPosRankSum=-2.244;VQSLOD=2.3681;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:56.35:0,56,822	0/0:14,0:14:42.12:0,42,593	0/0:11,0:10:21.04:0,21,289	0/0:10,0:10:1.17:0,1,195	0/0:30,0:30:90.27:0,90,1358	0/0:29,0:29:87.27:0,87,1290	0/0:11,0:11:29.28:0,29,387	0/0:28,0:28:84.26:0,84,1234	0/0:29,0:29:87.25:0,87,1292	0/0:27,0:27:78.23:0,78,1138	0/0:25,0:25:75.24:0,75,1146	1/1:4,17:21:63.01:1203,63,0	0/0:24,0:24:69.19:0,69,971	0/0:23,0:23:67.10:0,67,1010	0/0:26,0:26:78.19:0,78,1125	0/0:35,0:35:89.99:0,90,793	0/0:14,0:14:42.14:0,42,655	0/0:8,0:8:23.29:0,23,333	0/0:21,0:20:57.61:0,58,789	0/0:30,0:30:84.24:0,84,1245	0/0:23,0:23:66.20:0,66,989	1/1:9,18:27:77.84:1356,78,0	1/1:9,14:24:62.91:1098,63,0	1/1:6,5:11:12.63:247,13,0	0/0:25,0:25:72.17:0,72,998	0/0:21,0:21:63.16:0,63,879	0/0:26,0:26:78.22:0,78,1168	0/0:10,0:10:30.10:0,30,468
chr10	101149777	.	C	CGCTATA	6224.39	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.177;DP=603;FS=32.945;HRun=0;HaplotypeScore=149.2838;InbreedingCoeff=0.9857;MQ=78.54;MQ0=0;MQRankSum=-12.166;QD=85.27;ReadPosRankSum=-0.905;VQSLOD=3.3126;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.19:0,60,1460	0/0:15,0:15:45.15:0,45,1153	0/0:19,0:19:51.17:0,51,1181	0/0:12,0:12:30.08:0,30,714	0/0:27,0:27:81.25:0,81,1931	0/0:30,0:30:87.30:0,87,2226	0/0:12,0:12:33.11:0,33,784	0/0:33,0:33:96.32:0,96,2373	0/0:34,0:34:96.33:0,96,2408	0/0:30,0:30:90.31:0,90,2253	0/0:23,0:23:66.21:0,66,1609	1/1:4,20:27:72.25:2635,72,0	0/0:20,0:20:60.21:0,60,1503	0/0:22,0:22:66.23:0,66,1655	0/0:22,0:22:66.23:0,66,1692	0/0:30,0:30:90.30:0,90,2224	0/0:13,0:13:39.08:0,39,890	0/0:6,0:6:15.02:0,15,325	0/0:23,0:23:66.23:0,66,1586	0/0:26,0:26:78.27:0,78,1903	0/0:24,0:24:72.25:0,72,1814	1/1:2,18:20:54.19:2020,54,0	1/1:2,12:15:30.10:1122,30,0	1/1:1,10:10:11.74:448,12,0	0/0:25,0:25:72.25:0,72,1818	0/0:23,0:23:69.23:0,69,1714	0/0:32,0:32:93.30:0,93,2299	0/0:9,0:9:27.09:0,27,692
chr10	101150011	.	G	GA	11330.57	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-11.384;DP=641;FS=0.312;HRun=7;HaplotypeScore=59.4014;InbreedingCoeff=0.9642;MQ=79.06;MQ0=0;MQRankSum=-3.429;QD=30.79;ReadPosRankSum=1.127;VQSLOD=5.0936;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:38:70.33:1131,70,0	1/1:1,11:12:33.10:399,33,0	0/0:14,0:14:26.77:0,27,243	0/0:17,0:16:41.81:0,42,387	0/0:36,0:36:90.12:0,90,864	0/0:20,0:20:48.07:0,48,464	0/0:20,0:20:42.06:0,42,405	1/1:2,29:31:84.22:999,84,0	0/0:23,0:23:60.08:0,60,573	0/0:25,0:25:63.09:0,63,608	0/0:24,0:24:69.11:0,69,666	1/1:3,25:28:66.20:797,66,0	0/0:17,0:17:48.08:0,48,464	0/0:28,0:28:72.11:0,72,695	1/1:4,29:33:78.24:942,78,0	1/1:3,23:26:69.21:834,69,0	0/0:19,0:19:54.09:0,54,522	0/0:9,0:9:24.04:0,24,232	1/1:2,21:22:60.18:725,60,0	1/1:0,20:20:57.14:673,57,0	1/1:1,18:19:48.15:580,48,0	1/1:1,24:25:66.20:796,66,0	1/1:3,21:24:60.15:708,60,0	1/1:3,28:31:75.23:906,75,0	0/0:21,0:21:54.08:0,54,522	1/1:3,17:21:2.09:573,2,0	1/1:1,32:33:96.29:1160,96,0	1/1:1,3:4:9.03:109,9,0
chr10	101150251	.	T	TG	3552.82	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-10.607;DP=587;FS=0.920;HRun=1;HaplotypeScore=53.9805;InbreedingCoeff=0.9952;MQ=79.01;MQ0=0;MQRankSum=0.445;QD=41.80;ReadPosRankSum=2.048;VQSLOD=4.0484;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.16:0,63,785	0/0:8,0:8:21.07:0,21,272	0/0:14,0:14:36.05:0,36,441	0/0:13,0:13:32.94:0,33,366	0/0:35,0:35:99:0,105,1348	0/0:26,0:26:75.24:0,75,974	0/0:19,0:19:57.16:0,57,712	0/0:29,0:29:84.23:0,84,1029	0/0:27,0:27:78.22:0,78,974	0/0:36,0:36:99:0,102,1302	0/0:27,0:27:81.26:0,81,1051	1/1:1,17:18:51.17:762,51,0	0/0:18,0:18:51.14:0,51,633	0/0:15,0:15:45.15:0,45,582	0/0:25,0:25:75.23:0,75,959	0/0:15,0:15:45.13:0,45,570	0/0:20,0:20:57.18:0,57,739	0/0:7,0:7:18.02:0,18,208	0/0:21,0:21:63.17:0,63,777	0/0:29,0:29:87.28:0,87,1129	0/0:16,0:16:45.13:0,45,570	1/1:0,33:33:96.32:1426,96,0	1/1:0,24:24:63.11:915,63,0	1/1:0,10:10:30.10:450,30,0	0/0:22,0:22:60.19:0,60,779	0/0:30,0:30:90.28:0,90,1156	0/0:22,0:22:66.17:0,66,812	0/0:7,0:7:21.07:0,21,273
chr10	101150609	.	CT	C	1708.89	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.920;DP=514;FS=26.428;HRun=4;HaplotypeScore=49.0803;InbreedingCoeff=0.9946;MQ=78.60;MQ0=0;MQRankSum=-3.023;QD=28.01;ReadPosRankSum=0.498;VQSLOD=1.6484;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:42.13:0,42,571	0/0:9,0:9:27.09:0,27,377	0/0:12,0:12:15.08:0,15,304	0/0:13,0:13:32.81:0,33,390	0/0:26,0:26:75.22:0,75,1003	0/0:24,0:24:66.19:0,66,888	0/0:12,0:11:36.10:0,36,472	0/0:25,0:25:69.21:0,69,922	0/0:16,0:16:48.16:0,48,670	0/0:22,0:22:63.14:0,63,834	0/0:21,0:21:63.19:0,63,851	1/1:2,10:12:30.09:358,30,0	0/0:13,0:13:36.12:0,36,499	0/0:16,0:16:48.15:0,48,656	0/0:15,0:15:39.12:0,39,529	0/0:30,0:30:90.27:0,90,1211	0/0:19,0:19:54.18:0,54,747	0/0:9,0:9:27.09:0,27,375	0/0:23,0:23:60.19:0,60,826	0/0:30,0:30:90.29:0,90,1244	0/0:12,0:12:33.10:0,33,445	1/1:0,14:14:39.08:452,39,0	1/1:0,21:21:54.11:631,54,0	1/1:1,13:14:36.11:429,36,0	0/0:24,0:24:72.24:0,72,1008	0/0:23,0:23:66.20:0,66,879	0/0:32,0:32:96.32:0,96,1341	0/0:12,0:12:36.09:0,36,483
chr10	101150723	.	T	TG	2154.38	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.398;DP=487;FS=0.530;HRun=1;HaplotypeScore=58.3272;InbreedingCoeff=0.9826;MQ=77.31;MQ0=0;MQRankSum=-4.943;QD=37.80;ReadPosRankSum=2.969;VQSLOD=4.1882;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:30.10:0,30,390	0/0:6,0:6:18.06:0,18,234	0/0:10,0:10:24.06:0,24,288	0/0:12,0:12:32.29:0,32,366	0/0:27,0:27:81.25:0,81,1038	0/0:24,0:24:72.22:0,72,920	0/0:9,0:9:27.09:0,27,351	0/0:38,0:38:99:0,108,1356	0/0:18,0:18:51.15:0,51,648	0/0:17,0:17:51.17:0,51,662	0/0:25,0:25:72.23:0,72,935	1/1:0,11:11:33.11:478,33,0	0/0:15,0:15:45.15:0,45,584	0/0:14,0:14:42.13:0,42,533	0/0:15,0:15:42.14:0,42,545	0/0:17,0:17:51.15:0,51,648	0/0:13,0:13:36.12:0,36,467	0/0:6,0:6:14.16:0,14,193	0/0:18,0:18:51.17:0,51,662	0/0:36,0:36:99:0,105,1363	0/0:25,0:25:75.24:0,75,974	1/1:0,14:14:42.14:609,42,0	1/1:1,18:19:57.17:793,57,0	1/1:0,13:13:30.05:435,30,0	0/0:29,0:29:87.24:0,87,1085	0/0:15,0:15:45.14:0,45,572	0/0:25,0:25:75.18:0,75,939	0/0:5,0:5:12.04:0,12,156
chr10	101151529	.	TA	T	1529	PASS	AB=0.570;AC=6;AF=0.107;AN=56;BaseQRankSum=3.670;DP=668;FS=0.880;HRun=10;HaplotypeScore=82.5419;InbreedingCoeff=0.6391;MQ=81.22;MQ0=0;MQRankSum=-0.095;QD=15.93;ReadPosRankSum=2.879;VQSLOD=4.1482;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,2:27:26.10:0,26,744	0/0:8,0:8:21.05:0,21,227	0/0:27,0:26:30.57:0,31,319	0/0:23,0:21:4.91:0,5,238	0/0:34,1:35:61.17:0,61,895	0/0:23,0:23:63.16:0,63,690	0/0:31,0:31:81.19:0,81,879	0/0:27,0:27:60.15:0,60,656	0/0:22,1:23:28.08:0,28,528	0/0:23,0:23:54.15:0,54,597	0/0:21,1:22:34.11:0,34,605	0/1:5,25:30:9.10:521,0,9	0/0:34,1:35:70.17:0,70,979	0/0:25,1:27:36.94:0,37,611	0/0:28,3:31:58.17:0,58,870	0/0:27,2:29:29.08:0,29,761	0/0:22,0:22:57.14:0,57,621	0/0:9,0:9:24.06:0,24,265	0/0:27,0:27:69.18:0,69,755	0/0:23,1:24:37.09:0,37,624	0/0:14,1:16:9.87:0,10,320	1/1:4,15:19:14.81:358,15,0	0/1:6,12:19:4.28:185,0,4	1/1:1,27:28:68.99:599,69,0	0/0:23,1:25:42.96:0,43,685	0/0:28,0:28:43.13:0,43,704	0/0:17,1:18:25.07:0,25,494	0/0:11,1:12:6.99:0,7,285
chr10	101152032	.	CAT	C	1228.78	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.735;DP=660;FS=0.000;HRun=0;HaplotypeScore=79.2678;InbreedingCoeff=0.9968;MQ=85.16;MQ0=0;MQRankSum=-4.905;QD=37.24;ReadPosRankSum=2.408;VQSLOD=5.3825;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:90.30:1324,90,0	0/0:10,0:10:30.10:0,30,561	0/0:24,0:24:62.85:0,63,1052	0/0:17,0:17:42.92:0,43,740	0/0:36,0:36:99:0,105,1925	0/0:26,0:26:69.22:0,69,1261	0/0:21,0:21:60.17:0,60,1050	0/0:36,0:36:99:0,105,1937	0/0:25,0:25:75.26:0,75,1403	0/0:28,0:28:84.29:0,84,1564	0/0:20,0:20:57.18:0,57,1036	0/0:12,0:12:36.12:0,36,635	0/0:26,0:26:75.22:0,75,1310	0/0:27,0:27:81.28:0,81,1509	0/0:35,0:35:99:0,105,1958	0/0:28,0:28:84.27:0,84,1541	0/0:19,0:19:54.19:0,54,1010	0/0:11,0:11:30.10:0,30,560	0/0:21,0:21:57.18:0,57,1008	0/0:33,0:33:99:0,99,1804	0/0:26,0:26:78.25:0,78,1428	0/0:14,0:14:42.14:0,42,738	0/0:29,0:29:84.25:0,84,1393	0/0:15,0:15:42.14:0,42,723	0/0:21,0:21:63.20:0,63,1141	0/0:22,0:22:63.22:0,63,1177	0/0:36,0:36:99:0,105,1946	0/0:9,0:9:24.08:0,24,438
chr10	101152635	.	T	TA	5728.89	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=4.109;DP=480;FS=2.128;HRun=8;HaplotypeScore=81.2376;InbreedingCoeff=0.9376;MQ=69.73;MQ0=1;MQRankSum=-5.572;QD=22.47;ReadPosRankSum=-3.373;VQSLOD=3.8616;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:54.12:600,54,0	1/1:2,6:8:18.05:208,18,0	0/1:11,0:11:0.78:1,0,92	0/0:11,0:9:9:0,9,80	0/0:25,0:25:57.02:0,57,522	0/0:26,0:26:69.02:0,69,626	0/0:15,0:15:32.99:0,33,297	1/1:9,19:28:60.08:646,60,0	0/0:6,0:6:12.01:0,12,110	0/0:20,0:20:54.02:0,54,492	0/0:17,0:17:41.89:0,42,372	1/1:9,0:13:29.03:176,29,0	0/0:21,0:21:57.02:0,57,522	0/0:24,0:24:66:0,66,594	1/1:6,12:18:36.11:415,36,0	1/1:0,12:12:33.10:381,33,0	0/0:23,0:23:66.02:0,66,599	0/0:13,0:13:33.01:0,33,302	1/1:7,10:17:36.07:402,36,0	1/1:5,22:27:78.09:845,78,0	1/1:2,7:9:18.05:204,18,0	1/1:6,0:12:28.64:153,29,0	1/1:10,0:14:28.76:159,29,0	1/1:2,0:12:27.26:130,27,0	0/0:24,0:24:68.99:0,69,619	1/1:6,20:26:38.69:685,39,0	1/1:8,16:23:54.16:621,54,0	1/1:0,3:3:9.03:104,9,0
chr10	101152671	.	G	GTTTT	6140.11	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=3.560;DP=471;FS=33.231;HRun=10;HaplotypeScore=110.9694;InbreedingCoeff=0.7936;MQ=64.63;MQ0=0;MQRankSum=-8.429;QD=26.13;ReadPosRankSum=-5.575;VQSLOD=-0.4619;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:1.11:105,0,1	1/1:3,6:9:18.01:316,18,0	0/0:19,0:12:8.56:0,9,136	0/1:9,0:5:10.47:10,0,46	0/0:16,0:16:25.11:0,25,538	0/0:24,0:24:42.15:0,42,796	0/0:17,0:17:48.05:0,48,654	1/1:21,7:30:74.96:1076,75,0	0/0:8,0:8:15.02:0,15,212	0/0:16,0:16:45.12:0,45,600	0/0:11,0:11:24.01:0,24,319	0/0:10,0:10:14.92:0,15,114	0/0:18,0:19:24.92:0,25,363	0/1:24,0:24:1.23:1,0,693	1/1:3,19:23:30.06:596,30,0	1/1:11,0:11:10.92:161,11,0	0/0:20,0:20:33.08:0,33,639	0/0:10,0:10:12.07:0,12,306	1/1:11,1:13:30.89:426,31,0	1/1:19,10:34:76.79:1227,77,0	1/1:7,1:8:9.42:112,9,0	0/0:15,0:15:29.67:0,30,228	0/0:18,0:18:23.46:0,23,182	0/0:9,0:9:11.94:0,12,91	0/0:24,0:24:13.16:0,13,715	1/1:15,5:22:54.03:847,54,0	1/1:6,15:26:54.17:1121,54,0	1/1:1,4:7:6.49:142,6,0
chr10	101152677	.	TTTTTC	T	1610.35	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=3.504;DP=449;FS=8.165;HRun=0;HaplotypeScore=121.0367;InbreedingCoeff=0.8023;MQ=64.74;MQ0=0;MQRankSum=-7.128;QD=25.97;ReadPosRankSum=0.736;VQSLOD=2.9213;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:47.89:0,48,650	0/0:8,0:8:17.99:0,18,332	0/0:18,0:11:29.96:0,30,497	0/1:9,0:5:15.79:16,0,110	0/0:16,0:16:48.16:0,48,1269	0/0:23,0:23:66.21:0,66,1742	0/0:17,0:17:48.16:0,48,1375	0/0:27,0:27:75.25:0,75,1490	0/0:7,0:7:15.05:0,15,434	0/0:16,0:16:48.16:0,48,1327	0/0:10,0:10:27.08:0,27,670	1/1:2,11:13:22.62:323,23,0	0/0:15,0:15:39.13:0,39,942	0/0:23,0:23:69.23:0,69,1810	0/0:22,0:22:33.11:0,33,701	0/0:9,0:9:3.22:0,3,301	0/0:21,0:21:57.18:0,57,1472	0/0:9,0:9:27.09:0,27,746	0/0:14,0:14:39.07:0,39,705	0/0:31,0:31:75.26:0,75,1540	0/0:6,0:6:12.04:0,12,215	1/1:1,13:14:39.13:685,39,0	1/1:5,11:16:27.09:495,27,0	1/1:5,5:10:15.05:254,15,0	0/0:21,0:21:63.20:0,63,1725	0/0:23,0:23:60.20:0,60,1115	0/0:26,0:26:54.18:0,54,1081	0/0:7,0:7:9.03:0,9,198
chr10	101152680	.	TTC	T	662.83	PASS	AB=0.981;AC=14;AF=0.250;AN=56;BaseQRankSum=7.699;DP=438;FS=9.082;HRun=0;HaplotypeScore=94.4020;InbreedingCoeff=0.3738;MQ=67.40;MQ0=0;MQRankSum=-5.327;QD=5.71;ReadPosRankSum=-3.490;VQSLOD=1.3425;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:34.77:35,0,49	0/1:9,0:9:5.79:6,0,142	0/0:20,0:13:13.84:0,14,232	0/1:9,0:5:7.81:8,0,44	0/0:17,0:17:49.61:0,50,696	0/0:23,0:23:61.01:0,61,966	0/0:17,0:17:48.13:0,48,766	0/0:26,1:27:1.21:0,1,423	0/0:6,0:6:15.05:0,15,244	0/0:16,0:16:48.12:0,48,726	0/0:10,0:10:26.83:0,27,364	1/1:13,0:13:23.13:161,23,0	0/0:14,0:14:41.72:0,42,523	0/0:23,0:23:68.80:0,69,965	0/0:22,0:22:13.07:0,13,256	0/1:9,0:9:27.87:28,0,47	0/0:21,0:21:57.98:0,58,811	0/0:9,0:9:27.07:0,27,413	0/0:16,0:16:10.34:0,10,267	0/0:28,0:28:40.16:0,40,476	0/1:6,0:6:11.13:11,0,33	1/1:13,0:13:38.66:269,39,0	1/1:11,0:11:26.77:187,27,0	1/1:6,0:6:14.85:101,15,0	0/0:21,0:21:63.20:0,63,975	0/1:20,3:23:30.41:30,0,302	0/0:24,1:25:1.21:0,1,289	0/0:7,0:7:8.94:0,9,69
chr10	101152885	.	G	GT	1242.62	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.467;DP=782;FS=1.428;HRun=3;HaplotypeScore=71.2940;InbreedingCoeff=0.9841;MQ=75.95;MQ0=0;MQRankSum=-2.097;QD=32.70;ReadPosRankSum=3.719;VQSLOD=4.1085;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1292	0/0:15,0:15:39.12:0,39,468	0/0:15,0:15:42.09:0,42,467	0/0:18,0:18:54.12:0,54,609	0/0:30,0:30:81.25:0,81,971	0/0:40,0:40:99:0,114,1358	0/0:11,0:11:33.10:0,33,395	0/0:28,0:28:78.22:0,78,917	0/0:30,0:30:87.24:0,87,1021	0/0:36,0:36:99:0,99,1179	0/0:29,0:29:87.27:0,87,1044	0/0:30,0:30:90.22:0,90,1052	0/0:36,0:36:99:0,105,1243	0/0:32,0:32:84.26:0,84,1007	0/0:45,0:45:99:0,132,1500	1/1:2,36:38:96.32:1337,96,0	0/0:37,0:37:99:0,102,1207	0/0:29,0:29:81.16:0,81,952	0/0:28,0:28:78.24:0,78,934	0/0:21,0:21:60.12:0,60,702	0/0:22,0:22:63.18:0,63,744	0/0:17,0:17:48.15:0,48,576	0/0:22,0:22:63.18:0,63,746	0/0:29,0:29:78.18:0,78,908	0/0:36,0:36:99:0,99,1188	0/0:31,0:31:93.29:0,93,1115	0/0:34,0:34:96.18:0,96,1094	0/0:5,0:5:15.05:0,15,180
chr10	101153240	.	C	CATCT	15728.27	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-13.776;DP=762;FS=0.299;HRun=0;HaplotypeScore=112.1540;InbreedingCoeff=0.9870;MQ=81.60;MQ0=0;MQRankSum=-6.643;QD=61.44;ReadPosRankSum=-1.696;VQSLOD=6.2242;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:29:63.22:1679,63,0	1/1:2,11:13:27.09:719,27,0	0/0:26,0:26:66.16:0,66,1125	0/0:17,0:17:36.12:0,36,649	0/0:41,0:41:99:0,120,2185	0/0:34,0:34:90.31:0,90,1663	0/0:19,0:19:57.20:0,57,1064	1/1:6,31:37:99:2506,105,0	0/0:34,0:34:99:0,99,1848	0/0:37,0:37:99:0,105,1845	0/0:20,0:20:54.19:0,54,1003	0/0:26,0:26:75.26:0,75,1385	0/0:24,0:24:69.22:0,69,1241	0/0:37,0:37:93.31:0,93,1704	1/1:2,27:31:66.23:1757,66,0	0/0:37,0:37:99:0,111,2010	0/0:17,0:17:48.16:0,48,878	0/0:13,0:13:36.12:0,36,670	1/1:6,11:17:45.15:1148,45,0	1/1:1,32:35:93.32:2477,93,0	1/1:1,16:20:38.39:1038,38,0	0/0:34,0:34:93.32:0,93,1736	0/0:37,0:37:99:0,111,2031	0/0:20,0:20:57.20:0,57,1064	0/0:33,0:32:99:0,99,1832	1/1:3,16:21:7.19:1386,7,0	1/1:8,34:41:93.02:2379,93,0	1/1:2,8:10:24.08:639,24,0
chr10	101153763	.	TTCTCTC	T	122.26	PASS	AC=2;AF=0.043;AN=46;BaseQRankSum=3.261;DP=351;FS=5.851;HRun=0;HaplotypeScore=88.7490;InbreedingCoeff=0.5409;MQ=61.22;MQ0=7;MQRankSum=3.093;QD=8.73;ReadPosRankSum=2.362;VQSLOD=1.2903;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:13:24.74:214,25,0	./.	0/0:14,0:7:9.03:0,9,148	0/0:18,0:12:21.96:0,22,502	0/0:19,0:18:33.11:0,33,1018	./.	0/0:12,0:12:33.11:0,33,1060	0/0:11,0:10:12.03:0,12,206	0/0:11,0:11:24.08:0,24,787	0/0:17,0:17:36.12:0,36,1034	0/0:17,0:18:26.78:0,27,752	0/0:15,0:13:21.06:0,21,367	0/0:4,0:10:12.04:0,12,302	0/0:18,0:18:36.07:0,36,866	0/0:7,0:8:6.02:0,6,145	0/0:15,0:12:6.02:0,6,116	0/0:24,0:23:57.20:0,57,1738	0/0:18,0:18:39.13:0,39,1090	0/0:8,0:8:12.04:0,12,296	./.	./.	0/0:7,0:7:2.98:0,3,22	0/0:16,0:16:9.03:0,9,189	0/0:10,0:9:6.02:0,6,95	0/0:20,0:19:30.10:0,30,887	0/0:8,0:8:12.04:0,12,257	0/0:10,0:11:12.03:0,12,223	./.
chr10	101153791	.	CTGTGTGTGTATGTGTGTGTGTGTG	C	225.61	PASS	AB=1.000;AC=10;AF=0.217;AN=46;BaseQRankSum=6.204;DP=386;FS=0.000;HRun=0;HaplotypeScore=181.3685;InbreedingCoeff=0.3378;MQ=44.07;MQ0=18;MQRankSum=-2.262;QD=3.53;ReadPosRankSum=0.796;VQSLOD=2.5138;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:19:72.21:72,0,1122	./.	0/0:30,0:5:11.94:0,12,178	0/0:32,0:7:16.55:0,17,167	0/0:22,0:21:42.09:0,42,2103	0/0:12,0:12:6.02:0,6,494	0/0:15,0:15:36.11:0,36,968	0/1:7,0:7:36.82:37,0,67	0/0:18,0:17:42.14:0,42,2674	0/0:19,0:18:51.16:0,51,2431	0/0:21,0:20:36.11:0,36,1435	1/1:10,0:8:8.45:56,8,0	0/0:17,0:16:23.86:0,24,1613	0/0:24,0:24:46.20:0,46,2569	1/1:7,0:7:2.56:24,3,0	0/0:16,0:11:2.97:0,3,10	0/0:26,0:24:66.70:0,67,4290	0/0:20,0:18:51.15:0,51,2574	0/1:7,0:6:8.23:8,0,348	./.	./.	./.	0/0:9,0:9:0:0,0,0	1/1:5,1:6:5.66:142,6,0	0/0:20,0:18:47.82:0,48,3281	0/0:5,0:5:11.83:0,12,257	0/1:6,0:6:14.49:18,0,14	./.
chr10	101153797	.	GTGTA	G	479.11	PASS	AB=0.875;AC=15;AF=0.341;AN=44;BaseQRankSum=7.120;DP=381;FS=2.442;HRun=0;HaplotypeScore=80.2570;InbreedingCoeff=0.5818;MQ=43.71;MQ0=18;MQRankSum=-0.638;QD=6.06;ReadPosRankSum=-0.459;VQSLOD=2.0830;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,1:21:28.37:246,28,0	./.	0/0:29,0:4:6.02:0,6,122	0/0:29,0:5:9.35:0,9,88	0/0:19,0:19:32.78:0,33,651	0/1:12,0:12:11.33:11,0,64	0/0:15,0:15:35.92:0,36,508	1/1:0,6:6:17.90:172,18,0	0/0:19,0:18:25.95:0,26,830	0/0:22,0:20:59.59:0,60,946	0/0:23,0:22:12.49:0,12,416	1/1:9,0:7:2.94:18,3,0	0/0:16,0:15:24.07:0,24,415	0/0:24,0:24:14.45:0,14,612	1/1:5,0:5:2.36:9,2,0	0/0:17,0:12:0:0,0,1	0/0:27,0:25:53.44:0,53,1325	0/0:19,0:17:34.92:0,35,816	0/1:6,1:6:12:63,0,12	./.	./.	./.	./.	1/1:7,0:6:5.75:32,6,0	0/0:22,0:20:34.29:0,34,742	1/1:4,1:5:5.98:72,6,0	0/1:4,2:6:0.50:5,0,1	./.
chr10	101153799	.	GTA	G	623.46	PASS	AB=1.000;AC=17;AF=0.386;AN=44;BaseQRankSum=7.849;DP=378;FS=9.832;HRun=0;HaplotypeScore=67.1397;InbreedingCoeff=0.5439;MQ=43.62;MQ0=17;MQRankSum=-0.645;QD=6.23;ReadPosRankSum=0.047;VQSLOD=1.3975;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,3:22:38.56:361,39,0	./.	0/0:27,0:4:6.02:0,6,92	0/0:28,0:4:9.37:0,9,63	0/0:18,0:18:32.50:0,33,476	0/1:11,0:11:33.19:33,0,41	0/0:15,1:16:38.91:0,39,458	1/1:6,0:6:17.83:130,18,0	0/0:19,0:18:25.99:0,26,614	0/0:26,0:24:66.75:0,67,733	0/0:23,0:22:7.71:0,8,308	1/1:9,0:7:2.97:20,3,0	0/0:16,0:15:23.75:0,24,280	0/1:24,0:24:19.83:20,0,365	1/1:5,0:5:3:25,3,0	0/0:17,0:12:0:0,0,0	0/0:27,0:25:23.44:0,23,989	0/0:19,0:17:34.87:0,35,623	1/1:5,1:6:9.16:90,9,0	./.	./.	./.	./.	1/1:6,0:5:2.82:17,3,0	0/0:21,0:19:5.50:0,6,473	1/1:2,2:4:6.02:72,6,0	0/1:6,0:6:0.21:9,0,0	./.
chr10	101155186	.	GAC	G	2965.24	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.641;DP=784;FS=5.551;HRun=0;HaplotypeScore=117.4322;InbreedingCoeff=0.9837;MQ=81.81;MQ0=0;MQRankSum=-3.737;QD=30.89;ReadPosRankSum=3.647;VQSLOD=5.9365;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,166,2872	0/0:10,0:10:30.10:0,30,531	0/0:23,1:24:55.28:0,55,873	0/0:21,0:21:31.71:0,32,720	0/0:31,0:31:87.26:0,87,1482	0/0:53,0:53:99:0,160,2762	0/0:22,0:22:63.19:0,63,1060	0/0:36,0:36:99:0,99,1754	0/0:26,0:26:78.27:0,78,1379	0/0:30,0:30:84.29:0,84,1490	0/0:30,0:30:87.30:0,87,1534	1/1:6,22:28:63.21:865,63,0	0/0:34,0:34:99:0,102,1809	0/0:35,0:35:99:0,99,1744	0/0:23,0:23:63.22:0,63,1112	0/0:25,0:25:63.22:0,63,1112	0/0:41,0:41:99:0,114,2019	0/0:27,0:27:78.22:0,78,1351	0/0:18,0:18:48.16:0,48,852	0/0:27,0:27:78.24:0,78,1352	0/0:32,0:32:93.32:0,93,1650	1/1:1,18:19:48.16:653,48,0	1/1:2,17:19:42.14:577,42,0	1/1:3,27:30:75.25:1030,75,0	0/0:28,0:28:72.23:0,72,1248	0/0:26,0:26:75.26:0,75,1330	0/0:26,0:25:72.21:0,72,1215	0/0:3,0:3:9.03:0,9,160
chr10	101155950	.	AAAAG	A	1240.12	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=12.426;DP=593;FS=6.688;HRun=0;HaplotypeScore=112.1903;InbreedingCoeff=0.8596;MQ=51.05;MQ0=20;MQRankSum=-10.466;QD=9.39;ReadPosRankSum=-1.746;VQSLOD=1.9122;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:42,3:44:44.77:668,45,0	0/0:7,0:7:18.06:0,18,429	0/0:14,0:2:4.26:0,4,40	0/0:11,0:7:17.71:0,18,145	0/0:35,0:35:66.22:0,66,1805	0/0:17,0:16:45.11:0,45,914	0/0:17,0:17:48.04:0,48,903	0/0:31,0:30:69.91:0,70,1020	0/0:18,0:18:45.09:0,45,809	0/0:21,0:19:47.99:0,48,735	0/0:20,0:19:54.07:0,54,935	1/1:20,0:19:32.43:229,32,0	0/0:19,0:17:28.39:0,28,667	0/0:28,0:28:75.22:0,75,1564	0/0:21,0:21:55.80:0,56,1021	0/1:20,0:18:9.36:9,0,36	0/0:35,0:35:95.41:0,95,1616	0/0:29,0:28:73.85:0,74,1335	0/0:20,0:18:54.13:0,54,949	0/0:20,0:19:53.99:0,54,960	0/0:16,0:13:35.12:0,35,618	1/1:10,0:10:13.26:82,13,0	1/1:18,0:17:32.14:216,32,0	1/1:18,1:16:25.44:211,25,0	0/0:26,0:26:69.15:0,69,1338	0/0:24,0:24:55.05:0,55,1080	0/0:21,0:21:63.10:0,63,1126	0/0:11,0:11:27:0,27,446
chr10	101155951	.	AAAG	A	1195.42	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.059;DP=596;FS=6.749;HRun=0;HaplotypeScore=103.1289;InbreedingCoeff=0.9272;MQ=52.12;MQ0=20;MQRankSum=-9.664;QD=10.67;ReadPosRankSum=-1.815;VQSLOD=1.9800;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:44,2:45:34.10:405,34,0	0/0:7,0:7:18.06:0,18,352	0/0:15,0:3:1.54:0,2,32	0/0:13,0:9:19.87:0,20,145	0/0:35,0:35:86.31:0,86,1539	0/0:17,0:16:45.11:0,45,789	0/0:17,0:17:48.08:0,48,779	0/0:31,0:30:70.41:0,70,863	0/0:18,0:18:45.05:0,45,692	0/0:19,0:17:47.76:0,48,652	0/0:20,0:19:54.05:0,54,779	1/1:10,10:19:29.43:328,29,0	0/0:19,0:17:38.34:0,38,593	0/0:30,0:30:81.19:0,81,1359	0/0:21,0:21:56.27:0,56,860	0/0:20,0:18:7.77:0,8,84	0/0:34,0:34:98.01:0,98,1386	0/0:29,0:28:73.80:0,74,1123	0/0:22,0:20:60.12:0,60,862	0/0:20,0:19:53.99:0,54,811	0/0:17,0:14:38.77:0,39,522	1/1:9,1:10:14.83:87,15,0	1/1:10,7:16:23.84:297,24,0	1/1:15,4:17:26.16:251,26,0	0/0:25,0:25:69.12:0,69,1114	0/0:23,0:23:65.27:0,65,948	0/0:21,0:21:63.12:0,63,957	0/0:11,0:11:26.94:0,27,369
chr10	101155952	.	AAG	A	847.42	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.437;DP=594;FS=7.979;HRun=0;HaplotypeScore=93.7890;InbreedingCoeff=0.9269;MQ=52.18;MQ0=20;MQRankSum=-9.439;QD=7.57;ReadPosRankSum=-1.858;VQSLOD=2.2532;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:45,1:45:14.30:271,14,0	0/0:6,0:6:18.06:0,18,280	0/0:15,0:3:1.50:0,2,32	0/0:13,0:9:16.12:0,16,135	0/0:36,0:36:93.86:0,94,1285	0/0:17,0:16:45.11:0,45,640	0/0:17,0:17:48.08:0,48,646	0/0:31,0:30:64.29:0,64,738	0/0:18,0:18:45.04:0,45,567	0/0:19,0:17:47.99:0,48,567	0/0:20,0:19:54.03:0,54,649	1/1:19,1:19:26.21:236,26,0	0/0:19,0:17:38.84:0,39,497	0/0:29,0:29:81.02:0,81,1099	0/0:21,0:21:56.58:0,57,704	0/0:20,0:18:9.66:0,10,126	0/0:34,0:34:89.68:0,90,1119	0/0:29,0:28:67.84:0,68,884	0/0:23,0:21:62.88:0,63,740	0/0:20,0:19:53.79:0,54,648	0/0:17,0:14:38.30:0,38,406	1/1:10,0:10:18.09:111,18,0	1/1:17,0:16:18.72:201,19,0	1/1:17,2:17:25.69:200,26,0	0/0:25,0:25:69.05:0,69,890	0/0:22,0:22:65.45:0,65,801	0/0:21,0:21:63.02:0,63,792	0/0:10,0:10:26.97:0,27,315
chr10	101155960	.	AAAAG	A	2825.49	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.807;DP=604;FS=2.216;HRun=0;HaplotypeScore=107.9148;InbreedingCoeff=0.9512;MQ=54.17;MQ0=15;MQRankSum=-9.276;QD=21.41;ReadPosRankSum=-0.721;VQSLOD=3.2982;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,31:42:58.64:758,59,0	0/0:7,0:7:21.06:0,21,483	0/0:18,0:4:8.03:0,8,125	0/0:14,0:10:3.85:0,4,318	0/0:35,0:35:86.45:0,86,2029	0/0:17,0:16:45.14:0,45,974	0/0:15,0:15:39.08:0,39,893	0/0:34,0:33:81.19:0,81,1516	0/0:18,0:18:42.13:0,42,927	0/0:21,0:20:57.02:0,57,1036	0/0:21,0:20:57.18:0,57,1210	1/1:5,18:22:29.55:460,30,0	0/0:19,0:17:41.90:0,42,768	0/0:32,0:32:87.26:0,87,1801	0/0:22,0:22:43.95:0,44,1134	1/1:2,20:21:27.09:492,27,0	0/0:34,0:34:92.28:0,92,1858	0/0:28,0:27:69:0,69,1454	0/0:23,0:22:63.16:0,63,1175	0/0:19,0:18:51.17:0,51,1092	0/0:16,0:15:42.13:0,42,950	1/1:0,9:9:18.06:269,18,0	1/1:5,11:16:26.71:422,27,0	1/1:13,7:18:39.60:611,40,0	0/0:24,0:24:72.22:0,72,1624	0/0:25,0:25:75.11:0,75,1346	0/0:22,0:22:65.23:0,65,1338	0/0:8,0:8:18.06:0,18,452
chr10	101155964	.	G	GA	1241.64	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.654;DP=603;FS=7.239;HRun=8;HaplotypeScore=81.9509;InbreedingCoeff=0.9482;MQ=55.77;MQ0=15;MQRankSum=-8.724;QD=9.70;ReadPosRankSum=-1.182;VQSLOD=1.6194;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:39,3:42:43.98:381,44,0	0/0:8,0:8:24.01:0,24,219	0/0:19,0:5:7.51:0,8,70	0/0:15,0:11:3.91:0,4,172	0/0:34,0:34:87.04:0,87,795	0/0:19,0:18:42:0,42,379	0/0:15,0:15:42.01:0,42,379	0/0:35,0:34:87.03:0,87,794	0/0:15,0:15:36.02:0,36,329	0/0:23,0:22:57.02:0,57,521	0/0:20,0:19:54.02:0,54,491	1/1:23,0:22:23.87:197,24,0	0/0:18,0:16:35.81:0,36,329	0/0:30,0:30:72.03:0,72,657	0/0:21,0:21:48.02:0,48,439	1/1:21,0:20:17.63:82,18,0	0/0:31,1:32:49.41:0,49,706	0/0:27,0:26:57:0,57,521	0/0:23,0:22:50.98:0,51,458	0/0:21,0:20:47.69:0,48,423	0/0:15,0:14:42.02:0,42,384	1/1:9,0:9:18.04:189,18,0	1/1:14,0:14:23.89:201,24,0	1/1:12,7:17:40.97:377,41,0	0/0:25,0:25:69.04:0,69,631	0/0:32,0:32:75.01:0,75,686	0/0:21,0:22:62.06:0,62,551	0/0:6,0:6:18.01:0,18,165
chr10	101156167	.	GC	G	467.01	PASS	AB=0.543;AC=1;AF=0.018;AN=56;BaseQRankSum=5.654;DP=538;FS=6.081;HRun=3;HaplotypeScore=93.7881;InbreedingCoeff=-0.0163;MQ=93.07;MQ0=0;MQRankSum=-2.892;QD=24.58;ReadPosRankSum=-0.497;VQSLOD=2.5500;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.16:0,48,683	0/0:7,0:7:18.06:0,18,259	0/0:26,0:26:55.84:0,56,981	0/0:28,0:26:44.28:0,44,893	0/0:30,0:30:81.27:0,81,1158	0/0:15,0:15:39.13:0,39,561	0/0:24,0:24:72.24:0,72,1037	0/0:23,0:23:66.22:0,66,951	0/0:20,0:20:60.18:0,60,842	0/0:14,0:14:42.14:0,42,604	0/0:18,0:18:51.17:0,51,734	0/0:25,0:25:69.23:0,69,984	0/0:15,0:15:45.15:0,45,648	0/0:16,0:16:48.16:0,48,690	0/0:18,0:18:41.92:0,42,588	0/1:3,16:19:29.24:541,0,29	0/0:40,0:40:99:0,114,1616	0/0:16,0:16:45.11:0,45,624	0/0:14,0:14:42.14:0,42,602	0/0:14,0:14:42.14:0,42,603	0/0:28,0:28:75.25:0,75,1080	0/0:14,0:14:27.05:0,27,364	0/0:11,0:11:23.99:0,24,299	0/0:24,0:24:51.07:0,51,668	0/0:18,0:18:54.16:0,54,751	0/0:11,0:11:33.11:0,33,475	0/0:21,0:21:57.04:0,57,800	0/0:10,0:11:33.11:0,33,475
chr10	101156196	.	GA	G	2104.34	PASS	AB=0.819;AC=20;AF=0.357;AN=56;BaseQRankSum=3.798;DP=596;FS=10.047;HRun=11;HaplotypeScore=107.7688;InbreedingCoeff=0.4877;MQ=71.00;MQ0=2;MQRankSum=1.709;QD=7.23;ReadPosRankSum=2.326;VQSLOD=1.5533;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:4.15:0,4,163	1/1:2,6:8:14.98:123,15,0	0/1:39,2:21:46.10:46,0,117	0/1:25,0:18:4.01:4,0,148	0/0:32,1:35:56.26:0,56,794	0/0:20,0:20:6.38:0,6,407	0/0:20,1:21:29.46:0,29,507	1/1:12,13:25:2.39:262,2,0	0/0:14,1:16:20.28:0,20,390	0/0:19,0:19:45.09:0,45,458	0/0:24,1:25:32.41:0,32,519	0/0:17,0:17:36.06:0,36,166	0/0:10,0:10:24.05:0,24,249	0/0:18,0:18:39.01:0,39,399	1/1:2,16:18:32.74:271,33,0	0/1:23,0:23:19.59:67,0,20	0/1:26,5:32:5.63:6,0,581	0/0:17,0:17:45.07:0,45,461	1/1:6,11:18:10.67:232,11,0	1/1:2,16:19:37.91:297,38,0	0/1:6,14:22:23.94:218,0,24	0/0:16,0:16:36.42:0,36,193	0/0:14,0:14:32.78:0,33,149	0/0:23,0:23:30.66:0,31,159	0/0:22,0:22:54.11:0,54,553	0/1:5,9:15:40.23:181,0,40	1/1:6,19:26:11.90:293,12,0	1/1:3,13:16:35.29:294,35,0
chr10	101156205	.	AAAG	A	812.18	PASS	AB=0.909;AC=5;AF=0.089;AN=56;BaseQRankSum=8.701;DP=626;FS=0.000;HRun=0;HaplotypeScore=136.9645;InbreedingCoeff=-0.0100;MQ=70.97;MQ0=4;MQRankSum=-9.486;QD=9.34;ReadPosRankSum=1.299;VQSLOD=3.3093;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:63.87:0,64,531	0/0:7,0:7:15.03:0,15,155	0/0:51,0:25:65.02:0,65,626	0/0:33,0:22:35.98:0,36,532	0/0:38,0:38:99:0,113,2051	0/0:23,0:23:69.03:0,69,1246	0/0:20,0:20:60.16:0,60,1216	0/0:22,0:22:59.68:0,60,683	0/0:16,0:16:48.16:0,48,983	0/0:22,0:22:66.15:0,66,1159	0/0:21,0:21:60.20:0,60,1220	0/1:16,0:16:6.44:36,0,6	0/0:12,0:12:36.07:0,36,649	0/0:20,0:20:60.10:0,60,1096	0/0:19,0:19:41.70:0,42,440	0/1:4,21:25:71.26:845,0,71	0/0:31,0:31:83.06:0,83,1593	0/0:19,0:19:57.10:0,57,1093	0/0:17,0:17:42.49:0,42,356	0/0:25,0:25:63.93:0,64,738	0/0:23,0:22:48.14:0,48,531	0/1:14,0:14:2.26:2,0,168	0/1:13,0:13:16.38:16,0,53	0/1:19,0:19:22.49:22,0,90	0/0:20,0:20:59.98:0,60,1222	0/0:25,0:25:68.46:0,68,777	0/0:25,0:25:55.95:0,56,644	0/0:14,0:14:38.88:0,39,386
chr10	101156207	.	AGGG	A	2672.81	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=12.622;DP=622;FS=7.040;HRun=7;HaplotypeScore=129.7486;InbreedingCoeff=0.8833;MQ=73.11;MQ0=4;MQRankSum=-9.084;QD=22.84;ReadPosRankSum=2.032;VQSLOD=0.6015;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:32:73.50:812,73,0	0/0:7,0:7:18.06:0,18,311	0/0:52,0:27:55.76:0,56,1030	0/0:33,0:22:44.54:0,45,700	0/0:36,0:37:96.29:0,96,1959	0/0:24,0:24:72.24:0,72,1425	0/0:20,0:20:57.20:0,57,1194	0/0:23,0:23:57.20:0,57,1089	0/0:15,0:15:42.14:0,42,853	0/0:20,0:20:54.19:0,54,1132	0/0:20,0:20:54.18:0,54,1071	1/1:0,12:16:48.09:658,48,0	0/0:11,0:11:33.11:0,33,706	0/0:21,0:21:63.22:0,63,1293	0/0:21,0:21:47.48:0,47,866	0/1:24,0:24:98.45:118,0,98	0/0:31,0:31:81.28:0,81,1677	0/0:19,0:19:57.19:0,57,1188	0/0:17,0:17:33.11:0,33,613	0/0:26,0:26:69.24:0,69,1293	0/0:23,0:22:54.18:0,54,984	1/1:3,7:13:29.99:371,30,0	1/1:2,8:13:33.05:436,33,0	1/1:2,15:19:33.04:457,33,0	0/0:20,0:20:57.20:0,57,1183	0/0:25,0:25:72.69:0,73,1322	0/0:26,0:26:60.07:0,60,1083	0/0:13,0:14:18.03:0,18,576
chr10	101156452	.	TGTA	T	3476.41	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.923;DP=747;FS=3.498;HRun=0;HaplotypeScore=124.1446;InbreedingCoeff=0.9985;MQ=89.84;MQ0=0;MQRankSum=-3.129;QD=43.46;ReadPosRankSum=1.634;VQSLOD=5.4039;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,156,2198	0/0:11,0:11:33.11:0,33,756	0/0:37,0:37:99:0,99,2141	0/0:21,0:21:60.20:0,60,1338	0/0:19,0:19:57.17:0,57,1257	0/0:23,0:23:69.22:0,69,1546	0/0:28,0:28:78.27:0,78,1770	0/0:33,0:33:84.28:0,84,1895	0/0:34,0:34:99:0,102,2212	0/0:25,0:25:72.25:0,72,1661	0/0:17,0:17:48.16:0,48,1107	1/1:1,23:24:69.24:1176,69,0	0/0:22,0:22:66.23:0,66,1506	0/0:40,0:40:99:0,117,2687	0/0:43,0:43:99:0,126,2901	0/0:28,0:28:75.26:0,75,1709	0/0:22,0:22:63.22:0,63,1449	0/0:15,0:15:45.15:0,45,1038	0/0:22,0:22:63.22:0,63,1447	0/0:25,0:25:72.25:0,72,1633	0/0:54,0:54:99:0,160,3578	1/1:1,16:17:45.15:767,45,0	1/1:0,12:12:27.09:459,27,0	1/1:1,26:27:63.22:1074,63,0	0/0:20,0:20:60.21:0,60,1360	0/0:31,0:31:93.32:0,93,2085	0/0:35,0:35:99:0,102,2331	0/0:7,0:7:21.03:0,21,384
chr10	101156669	.	A	AT	964.85	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-5.028;DP=633;FS=5.516;HRun=8;HaplotypeScore=82.7976;InbreedingCoeff=0.6850;MQ=70.50;MQ0=0;MQRankSum=-0.062;QD=19.30;ReadPosRankSum=1.332;VQSLOD=3.5889;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,35:37:93.23:1058,93,0	0/0:10,0:10:24.01:0,24,220	0/0:20,0:20:49.81:0,50,432	0/1:11,0:12:7.19:7,0,113	0/0:30,0:30:81.04:0,81,741	0/0:29,0:29:75.04:0,75,687	0/0:15,0:15:42.02:0,42,384	0/0:35,0:35:86.99:0,87,782	0/0:24,0:24:66.02:0,66,600	0/0:23,0:23:66.03:0,66,604	0/0:12,0:12:24.01:0,24,220	0/0:19,0:19:44.99:0,45,404	0/0:25,0:25:66.03:0,66,603	0/0:22,0:22:53.99:0,54,488	0/0:37,0:37:99:0,105,961	0/0:26,0:26:69.01:0,69,626	0/0:13,0:13:33.02:0,33,302	0/0:21,0:21:57.03:0,57,521	0/0:20,0:20:47.99:0,48,432	0/0:23,0:23:54.02:0,54,494	0/0:12,0:12:36.02:0,36,330	0/0:23,0:23:60:0,60,545	0/0:28,0:28:78.04:0,78,714	0/0:12,0:12:33.01:0,33,302	0/0:27,0:27:78.03:0,78,710	0/0:31,0:31:78.01:0,78,709	0/0:31,0:31:78.04:0,78,714	0/0:15,0:15:24:0,24,220
chr10	101157837	.	T	TA	10514.88	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-15.608;DP=667;FS=2.147;HRun=8;HaplotypeScore=61.1761;InbreedingCoeff=0.9848;MQ=79.88;MQ0=0;MQRankSum=-0.860;QD=27.82;ReadPosRankSum=0.933;VQSLOD=5.3847;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,34:38:87.21:989,87,0	1/1:0,12:12:33.06:366,33,0	0/0:18,0:18:44.97:0,45,404	0/0:15,0:15:21.60:0,22,171	0/0:32,0:32:84.04:0,84,768	0/0:21,0:21:51.02:0,51,467	0/0:20,0:20:51:0,51,460	1/1:9,31:39:90.21:1005,90,0	0/0:21,0:21:62.98:0,63,565	0/0:25,0:25:68.82:0,69,615	0/0:20,0:20:57.01:0,57,516	1/1:4,29:33:81.20:921,81,0	0/0:27,0:27:72.02:0,72,655	0/0:21,0:21:59.99:0,60,537	1/1:4,28:32:84.25:969,84,0	1/1:4,21:25:60.13:677,60,0	0/0:32,0:32:81.02:0,81,736	0/0:12,0:12:30.01:0,30,274	1/1:4,23:27:69.19:787,69,0	1/1:2,33:35:96.20:1078,96,0	1/1:4,8:12:24.07:277,24,0	1/1:4,14:18:39.12:450,39,0	1/1:0,24:24:66.20:762,66,0	1/1:6,28:34:75.22:866,75,0	0/0:24,0:24:50.19:0,50,602	1/1:3,22:25:66.18:746,66,0	1/1:3,17:20:48.14:552,48,0	1/1:1,2:3:6.02:69,6,0
chr10	101158603	.	CTGTT	C	1175.24	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=6.114;DP=667;FS=1.694;HRun=0;HaplotypeScore=113.1291;InbreedingCoeff=0.9971;MQ=70.36;MQ0=0;MQRankSum=-1.900;QD=34.57;ReadPosRankSum=2.425;VQSLOD=3.6651;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:34:72.19:1270,72,0	0/0:11,0:11:30.10:0,30,756	0/0:15,0:15:42.10:0,42,943	0/0:8,0:8:24.08:0,24,594	0/0:30,0:30:87.27:0,87,2154	0/0:17,0:17:51.18:0,51,1331	0/0:16,0:16:42.13:0,42,998	0/0:36,0:36:93.31:0,93,2219	0/0:17,0:17:48.16:0,48,1206	0/0:42,0:42:99:0,123,3157	0/0:24,0:24:72.25:0,72,1885	0/0:31,0:31:93.31:0,93,2280	0/0:24,0:24:66.23:0,66,1706	0/0:20,0:20:57.20:0,57,1422	0/0:34,0:34:99:0,99,2481	0/0:23,0:23:66.23:0,66,1669	0/0:22,0:22:63.20:0,63,1545	0/0:26,0:26:72.25:0,72,1885	0/0:21,0:21:57.20:0,57,1433	0/0:42,0:42:99:0,114,2849	0/0:11,0:11:33.11:0,33,750	0/0:20,0:20:57.19:0,57,1394	0/0:26,0:26:66.22:0,66,1627	0/0:18,0:18:54.17:0,54,1360	0/0:34,0:34:96.32:0,96,2464	0/0:25,0:25:72.20:0,72,1753	0/0:40,0:40:99:0,111,2784	./.
chr10	101158794	.	A	AAG	7212.40	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.701;DP=775;FS=5.331;HRun=0;HaplotypeScore=104.3961;InbreedingCoeff=0.9995;MQ=93.60;MQ0=1;MQRankSum=-5.723;QD=44.25;ReadPosRankSum=2.523;VQSLOD=6.4096;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,45:47:99:2031,114,0	0/0:13,0:13:36.09:0,36,481	0/0:31,0:31:90.26:0,90,1214	0/0:38,0:38:75.77:0,76,1109	0/0:22,0:22:51.16:0,51,699	0/0:20,0:20:54.18:0,54,756	0/0:25,0:25:75.25:0,75,1048	0/0:29,0:29:78.24:0,78,1060	0/0:35,0:35:96.29:0,96,1305	0/0:29,0:29:78.25:0,78,1064	0/0:26,0:26:78.26:0,78,1088	1/1:7,26:33:81.28:1456,81,0	0/0:30,0:30:90.30:0,90,1260	0/0:32,0:32:96.32:0,96,1343	0/0:40,0:40:99:0,117,1614	0/0:32,0:32:87.26:0,87,1183	0/0:27,0:27:78.23:0,78,1071	0/0:20,0:20:60.17:0,60,819	0/0:18,0:18:45.14:0,45,612	0/0:22,0:22:63.21:0,63,882	0/0:20,0:20:57.17:0,57,780	1/1:3,24:28:69.24:1228,69,0	1/1:1,23:25:72.25:1294,72,0	1/1:6,23:29:69.23:1204,69,0	0/0:33,0:33:90.30:0,90,1254	0/0:29,0:29:75.25:0,75,1048	0/0:33,0:33:96.32:0,96,1344	0/0:8,0:8:24.08:0,24,336
chr10	101158871	.	T	TGAGGGAAATGACTCA	21999.54	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=0.245;DP=701;FS=3.673;HRun=0;HaplotypeScore=276.0826;InbreedingCoeff=0.9996;MQ=78.90;MQ0=0;MQRankSum=-15.937;QD=141.93;ReadPosRankSum=-1.133;VQSLOD=4.4857;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,9:41:90.09:4622,90,0	0/0:11,0:11:30.10:0,30,1197	0/0:22,0:22:57.16:0,57,1707	0/0:18,0:18:38.90:0,39,1108	0/0:31,0:31:87.26:0,87,3475	0/0:17,0:17:36.12:0,36,1448	0/0:29,0:29:75.26:0,75,2844	0/0:28,0:28:69.24:0,69,2493	0/0:20,0:20:48.16:0,48,2012	0/0:35,0:35:99:0,99,3748	0/0:31,0:31:84.29:0,84,3515	1/1:13,15:28:75.24:4857,75,0	0/0:35,0:35:99:0,102,4116	0/0:29,0:29:78.25:0,78,3143	0/0:35,0:35:96.33:0,96,3914	0/0:23,0:23:66.23:0,66,2736	0/0:21,0:21:63.17:0,63,2288	0/0:21,0:21:53.78:0,54,2313	0/0:16,0:16:39.13:0,39,1480	0/0:26,0:26:69.22:0,69,2737	0/0:14,0:14:39.13:0,39,1640	1/1:25,17:42:99:6397,108,0	1/1:12,10:21:56.77:2822,57,0	1/1:13,9:22:54:3301,54,0	0/0:28,0:28:78.25:0,78,3111	0/0:28,0:28:75.24:0,75,2852	0/0:19,0:19:54.15:0,54,2134	0/0:9,0:9:27.09:0,27,1189
chr10	101159357	.	AT	A	486.49	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.025;DP=425;FS=6.222;HRun=7;HaplotypeScore=40.3986;InbreedingCoeff=0.8653;MQ=71.39;MQ0=0;MQRankSum=-0.596;QD=22.11;ReadPosRankSum=0.129;VQSLOD=2.7755;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:57.13:581,57,0	0/0:6,0:6:18.06:0,18,226	0/0:9,0:9:21.06:0,21,256	0/0:4,0:4:9.02:0,9,101	0/0:25,0:25:72.22:0,72,893	0/0:20,0:20:51.16:0,51,642	0/0:11,0:11:30.10:0,30,377	0/0:33,0:33:87.27:0,87,1083	0/0:15,0:15:42.13:0,42,528	0/0:25,0:25:72.21:0,72,891	0/0:19,0:19:54.17:0,54,679	0/0:13,0:13:39.12:0,39,491	0/0:17,0:17:51.16:0,51,639	0/0:11,0:11:33.10:0,33,404	0/0:12,0:12:36.12:0,36,453	0/0:18,0:18:45.14:0,45,566	0/0:21,0:21:57.15:0,57,700	0/0:22,0:22:66.18:0,66,813	0/0:10,0:10:27.09:0,27,340	0/0:19,0:19:51.15:0,51,629	0/0:6,0:6:15.05:0,15,188	0/0:10,0:10:30.10:0,30,377	0/0:7,0:7:18.06:0,18,226	0/0:4,0:4:9.03:0,9,113	0/0:17,0:17:45.14:0,45,566	0/0:20,0:20:57.18:0,57,717	0/0:17,0:17:48.14:0,48,590	0/0:12,0:12:36.12:0,36,452
chr10	101159482	.	AT	A	3580.20	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.073;DP=356;FS=3.953;HRun=5;HaplotypeScore=33.7489;InbreedingCoeff=0.8753;MQ=71.21;MQ0=0;MQRankSum=-1.202;QD=30.86;ReadPosRankSum=-0.819;VQSLOD=3.2479;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.15:0,45,614	1/1:0,7:7:18.05:204,18,0	0/0:9,0:9:2.01:0,2,160	0/0:2,0:2:3.01:0,3,35	0/0:23,0:23:66.22:0,66,903	0/0:19,0:18:57.17:0,57,762	0/0:7,0:7:18.04:0,18,229	1/1:2,21:23:63.15:696,63,0	0/0:12,0:12:36.12:0,36,492	0/0:28,0:28:84.22:0,84,1096	0/0:17,0:17:45.14:0,45,600	0/0:9,0:9:27.08:0,27,353	0/0:12,0:12:36.11:0,36,476	0/0:14,0:14:42.14:0,42,574	1/1:1,8:9:24.07:272,24,0	0/0:11,0:11:33.11:0,33,451	0/0:24,0:24:69.19:0,69,918	0/0:12,0:12:33.11:0,33,451	1/1:1,11:12:33.09:374,33,0	1/1:0,17:17:51.15:578,51,0	1/1:0,8:8:24.07:272,24,0	0/0:2,0:2:3.01:0,3,41	0/0:8,0:8:24.08:0,24,328	0/0:3,0:3:8.99:0,9,102	0/0:11,0:11:33.11:0,33,451	1/1:1,19:20:19.13:606,19,0	1/1:0,19:19:48.14:544,48,0	1/1:0,1:1:3.01:34,3,0
chr10	101159765	.	TA	T	325.11	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.346;DP=240;FS=6.180;HRun=1;HaplotypeScore=22.5019;InbreedingCoeff=0.6071;MQ=96.33;MQ0=0;MQRankSum=-1.257;QD=32.51;ReadPosRankSum=-0.140;VQSLOD=2.6194;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:30.10:419,30,0	0/0:3,0:3:9.03:0,9,144	0/0:15,0:15:45.04:0,45,671	0/0:8,0:8:8.57:0,9,313	0/0:16,0:16:48.16:0,48,765	0/0:8,0:8:24.08:0,24,381	0/0:5,0:5:15.05:0,15,240	0/0:16,0:16:48.14:0,48,705	0/0:11,0:11:33.10:0,33,505	0/0:11,0:11:33.11:0,33,528	0/0:4,0:4:12.04:0,12,192	0/0:6,0:6:18.06:0,18,285	0/0:13,0:13:39.13:0,39,623	0/0:8,0:8:24.08:0,24,384	0/0:8,0:8:18.06:0,18,288	0/0:8,0:8:24.08:0,24,368	0/0:13,0:13:36.10:0,36,549	0/0:20,0:20:57.17:0,57,881	0/0:10,0:10:30.08:0,30,454	0/0:4,0:4:12.04:0,12,192	0/0:3,0:3:9:0,9,118	0/0:1,0:1:3.01:0,3,48	0/0:4,0:4:12.04:0,12,192	0/0:7,0:7:21.03:0,21,308	0/0:7,0:7:21.07:0,21,336	0/0:5,0:5:15.05:0,15,240	0/0:14,0:14:42.14:0,42,669	0/0:2,0:2:6.02:0,6,96
chr10	101159826	.	AATAT	A	65.09	PASS	AB=0.692;AC=3;AF=0.214;AN=14;BaseQRankSum=0.289;DP=97;FS=2.398;HRun=0;HaplotypeScore=17.6794;MQ=89.48;MQ0=1;MQRankSum=1.239;QD=3.43;ReadPosRankSum=0.600;VQSLOD=0.5030;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:7,0:6:0:0,0,0	./.	./.	./.	./.	0/0:13,0:13:4.83:0,5,70	./.	./.	./.	./.	./.	0/0:3,0:3:3.01:0,3,44	./.	./.	1/1:5,5:10:8.70:104,9,0	0/1:5,2:9:15.98:38,0,16	./.	./.	./.	./.	./.	./.	./.	0/0:2,0:2:2.96:0,3,19	./.	0/0:2,0:2:6.02:0,6,110
chr10	101159965	.	AGTGTGTGT	A	1085.92	PASS	AB=0.625;AC=7;AF=0.125;AN=56;BaseQRankSum=4.694;DP=532;FS=8.442;HRun=0;HaplotypeScore=141.9803;InbreedingCoeff=0.6114;MQ=73.02;MQ0=11;MQRankSum=-5.903;QD=15.74;ReadPosRankSum=0.906;VQSLOD=1.6700;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:20.91:0,21,457	0/0:7,0:7:9.02:0,9,273	0/0:21,0:12:3:0,3,26	0/0:35,0:27:18.03:0,18,283	0/0:8,0:9:21.04:0,21,607	0/0:19,0:19:42.14:0,42,1548	0/0:15,0:15:32.46:0,32,1001	0/0:24,0:23:39.10:0,39,1036	0/0:26,0:26:35.91:0,36,1389	0/0:23,0:24:33.06:0,33,1005	0/0:6,0:6:3:0,3,124	0/1:8,12:20:99:545,0,102	0/0:20,0:21:54.17:0,54,1768	0/0:28,0:31:63.18:0,63,2201	0/0:23,0:23:45.15:0,45,1625	0/0:9,0:25:37.06:0,37,337	0/0:21,0:21:48.16:0,48,1904	0/0:7,0:7:15:0,15,370	0/0:14,0:15:17.97:0,18,545	0/0:15,0:17:33.10:0,33,889	0/0:27,0:27:61.42:0,61,1877	1/1:8,5:13:6.02:125,6,0	1/1:6,7:13:6.02:109,6,0	1/1:13,10:22:20.96:439,21,0	0/0:17,0:17:21.06:0,21,694	0/0:19,0:19:42.14:0,42,1239	0/0:20,0:22:45.12:0,45,1492	0/0:7,0:7:3.01:0,3,124
chr10	101160216	.	AGTGT	A	945.80	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.090;DP=1002;FS=2.758;HRun=0;HaplotypeScore=243.6897;InbreedingCoeff=0.8370;MQ=59.73;MQ0=3;MQRankSum=-2.944;QD=23.07;ReadPosRankSum=0.262;VQSLOD=3.3124;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:40:3.48:0,3,10	0/0:7,0:7:9.96:0,10,231	0/0:31,0:20:33.11:0,33,767	0/0:53,0:41:85.26:0,85,1921	0/0:15,0:16:47.95:0,48,1155	0/0:30,0:33:80.43:0,80,1777	0/0:32,0:34:89.96:0,90,2037	0/0:43,0:45:99:0,111,2506	0/0:34,0:34:81.28:0,81,2017	0/0:38,0:38:87.29:0,87,2147	0/0:18,0:20:56.98:0,57,1320	0/0:43,0:43:53.69:0,54,789	0/0:48,0:50:99:0,132,3165	0/0:56,0:58:99:0,156,3718	0/0:58,0:59:99:0,126,3061	1/1:4,37:41:60.20:1041,60,0	0/0:38,0:38:99:0,108,2612	0/0:30,0:29:75.26:0,75,1790	0/0:19,0:19:45.11:0,45,1020	0/0:23,0:23:51.17:0,51,1263	0/0:93,0:95:99:0,213,4899	0/0:22,0:22:30.53:0,31,385	0/0:16,0:16:29.97:0,30,374	0/0:45,0:44:25.67:0,26,547	0/0:36,0:36:87.28:0,87,2034	0/0:45,0:45:99:0,120,2944	0/0:19,0:20:44.92:0,45,1016	0/0:9,0:9:22.73:0,23,606
chr10	101160222	.	T	TGTGC	3582.39	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=0.561;DP=1022;FS=6.307;HRun=0;HaplotypeScore=257.5050;InbreedingCoeff=0.8951;MQ=56.94;MQ0=5;MQRankSum=-0.252;QD=20.71;ReadPosRankSum=-1.112;VQSLOD=2.5337;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:43:4.92:5,0,11	0/0:8,0:8:11.17:0,11,194	0/0:32,0:18:38.98:0,39,624	0/0:57,0:37:99:0,104,1610	0/0:20,0:20:51.15:0,51,908	0/0:32,0:31:84.24:0,84,1425	0/0:36,0:36:96.21:0,96,1558	0/0:42,0:42:99:0,120,1929	0/0:33,0:33:96.24:0,96,1618	0/0:32,0:32:90.29:0,90,1614	0/0:20,0:20:52.27:0,52,963	1/1:16,27:43:60.16:1414,60,0	0/0:54,0:54:99:0,150,2516	0/0:57,0:57:99:0,162,2838	0/0:58,0:58:99:0,141,2412	0/0:46,0:46:48.85:0,49,594	0/0:42,0:42:99:0,118,1997	0/0:31,0:30:79.40:0,79,1314	0/0:20,0:20:56.97:0,57,851	0/0:20,0:20:51.16:0,51,934	0/0:96,0:96:99:0,242,3767	1/1:11,13:24:34.84:626,35,0	1/1:7,10:17:34.77:651,35,0	1/1:14,29:44:32.53:886,33,0	0/0:35,0:35:90.21:0,90,1512	0/0:45,0:45:99:0,123,2097	0/0:23,0:23:51.12:0,51,839	0/0:10,0:10:28.31:0,28,480
chr10	101160256	.	C	CGTGT	6943.49	PASS	AB=0.804;AC=28;AF=0.500;AN=56;BaseQRankSum=-2.289;DP=965;FS=30.481;HRun=0;HaplotypeScore=229.3954;InbreedingCoeff=0.6458;MQ=53.60;MQ0=12;MQRankSum=-3.328;QD=12.79;ReadPosRankSum=-2.634;VQSLOD=2.8776;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:40.16:0,40,686	1/1:4,6:11:12.30:232,12,0	0/0:36,0:16:5.10:0,5,82	0/1:39,0:16:14.34:43,0,14	0/0:16,0:18:30.09:0,30,444	0/0:19,0:20:8.44:0,8,232	0/0:33,0:35:13.98:0,14,632	1/1:39,0:40:34.79:445,35,0	0/0:36,0:37:75.17:0,75,1106	0/1:27,0:29:5.35:5,0,507	0/0:17,0:17:24.08:0,24,389	1/1:38,0:38:13.67:80,14,0	0/0:45,0:50:79.17:0,79,1394	0/0:45,0:50:77.22:0,77,1080	1/1:19,36:61:22.62:1381,23,0	1/1:39,0:42:33.11:313,33,0	0/0:47,0:49:99:0,106,1622	0/0:27,0:29:52.67:0,53,759	1/1:15,12:24:36.80:434,37,0	0/1:9,12:25:16.26:513,0,16	0/1:44,37:87:31.57:1257,0,32	1/1:19,0:19:9.90:28,10,0	1/1:9,0:9:4.96:55,5,0	1/1:37,0:36:7.72:38,8,0	0/0:32,0:33:31.59:0,32,766	1/1:13,23:39:7.78:1121,8,0	1/1:9,15:28:44.06:797,44,0	1/1:4,2:6:9.03:202,9,0
chr10	101160259	.	G	GTGTGTGTA	1374.54	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=12.771;DP=977;FS=24.716;HRun=0;HaplotypeScore=308.1723;InbreedingCoeff=0.0991;MQ=52.99;MQ0=12;MQRankSum=1.365;QD=3.25;ReadPosRankSum=3.797;VQSLOD=0.9250;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:60.99:0,61,1227	0/1:11,0:11:26.26:26,0,74	0/0:34,0:14:25.81:0,26,336	0/0:39,0:14:26.88:0,27,240	0/0:16,0:16:39.08:0,39,815	0/0:22,0:21:53.97:0,54,721	0/0:34,0:34:62.47:0,62,1442	0/0:39,0:39:7.78:0,8,440	0/0:36,0:36:81.04:0,81,1921	0/0:33,0:33:80.79:0,81,1270	0/0:18,0:18:48.05:0,48,814	1/1:16,23:42:8.46:182,8,0	0/0:53,0:53:99:0,134,2615	0/0:49,0:49:99:0,120,2243	0/1:61,0:61:99:196,0,343	0/1:43,0:42:99:285,0,123	0/0:47,0:47:99:0,118,2755	0/0:29,0:29:72.96:0,73,1412	0/1:30,0:26:64.08:64,0,131	0/1:26,0:25:64.10:64,0,215	0/1:86,0:86:99:171,0,676	0/0:8,13:24:0.26:0,0,1	1/1:4,5:13:2.99:129,3,0	1/1:13,20:33:7.64:96,8,0	0/0:33,0:33:74.54:0,75,1507	0/1:43,0:42:99:200,0,316	0/1:28,0:28:98.98:107,0,99	0/1:6,0:6:17.07:17,0,52
chr10	101160609	.	C	CAAAG	5962.63	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.684;DP=735;FS=3.277;HRun=0;HaplotypeScore=143.6453;InbreedingCoeff=0.9994;MQ=81.57;MQ0=0;MQRankSum=-11.930;QD=64.11;ReadPosRankSum=-3.077;VQSLOD=6.0046;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,2292	0/0:15,0:15:42.14:0,42,838	0/0:24,0:24:66.06:0,66,1119	0/0:20,0:20:57.19:0,57,1075	0/0:20,0:20:57.16:0,57,1052	0/0:22,0:22:66.23:0,66,1318	0/0:39,0:39:99:0,111,2134	0/0:35,0:35:96.31:0,96,1846	0/0:24,0:24:72.23:0,72,1390	0/0:22,0:22:66.19:0,66,1272	0/0:16,0:16:48.15:0,48,917	1/1:16,26:42:99:2767,111,0	0/0:41,0:41:99:0,117,2286	0/0:27,0:27:78.27:0,78,1545	0/0:40,0:40:99:0,120,2384	0/0:23,0:23:69.24:0,69,1378	0/0:31,0:31:93.30:0,93,1804	0/0:32,0:32:96.28:0,96,1828	0/0:26,0:26:78.27:0,78,1518	0/0:30,0:30:81.28:0,81,1612	0/0:33,0:33:99:0,99,1977	1/1:3,7:10:24.08:638,24,0	1/1:5,14:19:54.18:1427,54,0	1/1:6,16:22:47.65:1131,48,0	0/0:28,0:28:84.27:0,84,1631	0/0:24,0:24:72.24:0,72,1399	0/0:16,0:16:45.15:0,45,897	0/0:12,0:12:36.12:0,36,692
chr10	101160643	.	CTCGCTGGGAT	C	4887.40	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.430;DP=676;FS=2.538;HRun=0;HaplotypeScore=211.7149;InbreedingCoeff=0.9928;MQ=86.34;MQ0=0;MQRankSum=-11.514;QD=71.87;ReadPosRankSum=4.811;VQSLOD=4.5622;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:84.24:0,84,3711	0/0:13,0:13:30.07:0,30,1391	0/0:23,0:23:65.89:0,66,2744	0/0:25,0:25:72.24:0,72,3010	0/0:17,0:17:21.06:0,21,882	0/0:21,0:21:45.12:0,45,1815	0/0:40,0:40:99:0,102,4579	0/0:37,0:37:93.31:0,93,4189	0/0:20,0:20:57.20:0,57,3028	0/0:20,0:20:45.05:0,45,1533	0/0:16,0:16:24.04:0,24,978	1/1:4,28:32:81.23:2514,81,0	0/0:34,0:34:78.27:0,78,3876	0/0:30,0:30:68.90:0,69,3386	0/0:41,0:41:99:0,99,5083	0/0:23,0:23:63.22:0,63,3221	0/0:30,0:30:90.31:0,90,4685	0/0:27,0:27:72.25:0,72,3615	0/0:16,0:16:36.12:0,36,1798	0/0:19,0:19:45.13:0,45,2106	0/0:34,0:34:84.29:0,84,4013	1/1:1,6:7:15.05:500,15,0	1/1:1,12:13:33.11:1073,33,0	1/1:2,14:16:24.08:800,24,0	0/0:24,0:24:36.11:0,36,1673	0/0:26,0:26:69.21:0,69,3025	0/0:13,0:13:33.11:0,33,1711	0/0:14,0:14:33.11:0,33,1588
chr10	101160839	.	AC	A	1032.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.772;DP=708;FS=7.424;HRun=1;HaplotypeScore=78.0543;InbreedingCoeff=0.9994;MQ=88.70;MQ0=0;MQRankSum=0.325;QD=34.40;ReadPosRankSum=0.462;VQSLOD=3.0608;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,138,2204	0/0:10,0:10:30.10:0,30,478	0/0:21,0:21:63.19:0,63,966	0/0:32,0:32:83:0,83,1398	0/0:20,0:20:60.20:0,60,958	0/0:29,0:29:87.30:0,87,1389	0/0:26,0:26:78.27:0,78,1246	0/0:37,0:37:99:0,105,1638	0/0:21,0:21:63.21:0,63,1006	0/0:23,0:23:66.23:0,66,1055	0/0:16,0:16:45.15:0,45,719	0/0:25,0:25:75.25:0,75,1177	0/0:27,0:27:81.28:0,81,1292	0/0:24,0:24:72.23:0,72,1117	0/0:24,0:24:72.25:0,72,1145	1/1:1,29:30:39.32:1127,39,0	0/0:42,0:42:99:0,126,2000	0/0:19,0:19:54.18:0,54,862	0/0:19,0:19:57.19:0,57,907	0/0:17,0:17:51.17:0,51,814	0/0:33,0:33:96.30:0,96,1486	0/0:16,0:16:48.15:0,48,742	0/0:22,0:22:63.21:0,63,1002	0/0:36,0:36:99:0,105,1676	0/0:36,0:36:99:0,108,1720	0/0:17,0:17:51.17:0,51,815	0/0:18,0:18:54.17:0,54,834	0/0:19,0:19:54.18:0,54,861
chr10	101161505	.	A	AT	126.89	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.029;DP=576;FS=0.000;HRun=7;HaplotypeScore=63.7235;InbreedingCoeff=0.9883;MQ=81.62;MQ0=1;MQRankSum=-1.945;QD=12.69;ReadPosRankSum=0.362;VQSLOD=2.4793;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,8:10:18.06:217,18,0	0/0:12,0:12:36.05:0,36,342	0/0:16,0:15:33.05:0,33,318	0/0:16,0:15:36.21:0,36,367	0/0:29,0:29:78.12:0,78,751	0/0:17,0:17:42.05:0,42,400	0/0:16,0:16:48.08:0,48,464	0/0:40,0:40:99:0,108,1039	0/0:18,0:18:51.08:0,51,493	0/0:30,0:30:87.13:0,87,836	0/0:24,0:24:69.10:0,69,661	0/0:17,0:17:48.07:0,48,463	0/0:25,0:25:69.11:0,69,666	0/0:20,0:20:51.07:0,51,493	0/0:28,0:28:78.12:0,78,753	0/0:18,0:18:51.07:0,51,487	0/0:10,0:10:30.05:0,30,290	0/0:12,0:12:36.06:0,36,347	0/0:17,0:17:39.04:0,39,370	0/0:31,0:31:87.13:0,87,835	0/0:16,0:16:45.07:0,45,435	0/0:13,0:13:39.06:0,39,374	0/0:25,0:25:63.07:0,63,598	0/0:13,0:13:33.04:0,33,313	0/0:22,0:22:63.10:0,63,608	0/0:35,0:35:96.15:0,96,927	0/0:35,0:34:96.15:0,96,927	0/0:11,0:11:24.04:0,24,232
chr10	101161829	.	AG	A	1239.62	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.323;DP=647;FS=13.207;HRun=5;HaplotypeScore=97.8069;InbreedingCoeff=0.9992;MQ=78.36;MQ0=0;MQRankSum=-1.783;QD=26.37;ReadPosRankSum=1.259;VQSLOD=2.2954;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:84.24:953,84,0	0/0:9,0:9:27.09:0,27,369	0/0:22,0:22:54.07:0,54,660	0/0:13,0:13:33.05:0,33,398	0/0:32,0:32:93.30:0,93,1257	0/0:35,0:35:96.32:0,96,1311	0/0:28,0:28:75.24:0,75,1008	0/0:19,0:19:42.13:0,42,560	0/0:24,0:24:72.24:0,72,983	0/0:26,0:26:69.22:0,69,923	0/0:26,0:26:78.25:0,78,1048	0/0:24,0:24:69.23:0,69,943	0/0:24,0:24:72.23:0,72,969	0/0:23,0:23:66.21:0,66,889	0/0:25,0:25:75.24:0,75,1009	1/1:0,15:15:36.10:408,36,0	0/0:18,0:18:48.13:0,48,637	0/0:16,0:16:48.16:0,48,656	0/0:20,0:20:60.18:0,60,788	0/0:33,0:33:96.28:0,96,1275	0/0:17,0:17:45.14:0,45,596	0/0:16,0:16:48.16:0,48,655	0/0:29,0:29:81.24:0,81,1087	0/0:21,0:21:51.16:0,51,681	0/0:23,0:23:66.22:0,66,903	0/0:35,0:35:90.30:0,90,1230	0/0:30,0:30:87.29:0,87,1190	0/0:12,0:12:36.12:0,36,492
chr10	101161854	.	T	TA	3120.99	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.042;DP=625;FS=7.155;HRun=5;HaplotypeScore=84.4951;InbreedingCoeff=0.9192;MQ=67.24;MQ0=0;MQRankSum=0.030;QD=30.30;ReadPosRankSum=0.162;VQSLOD=3.9435;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1129	0/0:10,0:10:24.06:0,24,258	1/1:6,0:6:2.84:9,3,0	0/0:5,0:5:3:0,3,28	0/0:30,0:30:78.19:0,78,838	0/0:31,0:31:90.20:0,90,958	0/0:22,0:22:54.12:0,54,572	0/0:29,0:29:78.18:0,78,826	0/0:25,0:25:72.16:0,72,765	0/0:33,0:33:87.11:0,87,919	0/0:26,0:26:78.20:0,78,838	1/1:4,22:26:63.20:829,63,0	0/0:29,0:29:72.18:0,72,774	0/0:16,0:16:45.10:0,45,476	0/0:32,0:32:96.24:0,96,1032	0/0:18,0:18:45.11:0,45,484	0/0:17,0:17:51.13:0,51,548	0/0:14,0:14:36.09:0,36,387	0/0:18,0:18:48.12:0,48,516	0/0:29,0:29:78.18:0,78,829	0/0:9,0:9:24.06:0,24,258	1/1:0,18:18:51.17:671,51,0	1/1:2,26:28:75.24:987,75,0	1/1:2,23:25:60.20:790,60,0	0/0:21,0:21:60.15:0,60,645	0/0:34,0:34:99:0,99,1064	0/0:22,0:22:57.13:0,57,605	0/0:15,0:15:42.11:0,42,451
chr10	101162364	.	AATAATG	A	2119.44	PASS	AB=1.000;AC=23;AF=0.426;AN=54;BaseQRankSum=0.097;DP=226;FS=13.990;HRun=0;HaplotypeScore=57.4639;InbreedingCoeff=0.5790;MQ=68.01;MQ0=1;MQRankSum=0.125;QD=22.55;ReadPosRankSum=-2.020;VQSLOD=1.3576;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:29.93:0,30,461	1/1:0,2:2:5.93:86,6,0	0/0:6,0:5:7.78:0,8,74	./.	0/0:8,0:8:24:0,24,211	0/0:19,0:19:45.01:0,45,400	0/0:5,0:5:12:0,12,106	1/1:2,28:30:80.76:800,81,0	0/0:6,0:6:15:0,15,131	0/0:11,0:11:3.80:0,4,223	0/0:8,0:8:23.99:0,24,210	0/1:8,0:8:38.98:40,0,39	0/0:7,0:7:12:0,12,108	0/0:10,0:10:17.99:0,18,156	1/1:2,2:4:3.01:69,3,0	0/1:8,0:8:37.50:37,0,64	0/0:15,0:15:36.02:0,36,324	0/0:14,0:14:29.95:0,30,255	1/1:1,9:10:26.99:352,27,0	1/1:2,5:7:14.98:248,15,0	1/1:1,2:3:3.01:69,3,0	1/1:4,0:4:3:26,3,0	0/1:5,0:5:21.97:43,0,22	0/0:1,0:1:0.47:0,0,1	0/0:9,0:9:18.01:0,18,164	1/1:3,0:3:6.01:55,6,0	1/1:0,5:5:9.03:206,9,0	1/1:0,5:5:12.04:275,12,0
chr10	101162370	.	GATA	G	2493.32	PASS	AB=1.000;AC=44;AF=0.917;AN=48;BaseQRankSum=-0.704;DP=218;FS=1.576;HRun=0;HaplotypeScore=43.0844;InbreedingCoeff=0.1795;MQ=68.51;MQ0=2;MQRankSum=-0.428;QD=12.72;ReadPosRankSum=1.720;VQSLOD=3.0685;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:10:12:0,12,138	1/1:2,0:2:2.94:18,3,0	./.	./.	1/1:3,7:10:15.05:205,15,0	1/1:6,12:18:27.09:369,27,0	1/1:2,4:6:6.02:82,6,0	1/1:28,0:28:4.58:18,5,0	1/1:3,2:5:6.02:82,6,0	1/1:5,6:11:15.05:204,15,0	1/1:4,5:9:15.05:200,15,0	1/1:2,0:9:5.95:42,6,0	1/1:1,5:6:9.03:123,9,0	1/1:5,5:10:6.02:82,6,0	1/1:2,0:2:2.94:18,3,0	1/1:1,1:6:8.96:83,9,0	1/1:3,12:15:27.09:369,27,0	1/1:5,10:15:15.05:205,15,0	1/1:9,0:9:8.82:55,9,0	1/1:5,0:5:8.83:55,9,0	0/1:4,0:4:12.54:13,0,18	1/1:0,0:3:2.98:21,3,0	1/1:2,0:5:5.95:42,6,0	./.	1/1:1,6:7:15.05:205,15,0	./.	0/1:6,0:6:11.14:43,0,11	1/1:5,0:5:11.77:72,12,0
chr10	101162458	.	TG	T	618.45	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.891;DP=423;FS=2.225;HRun=1;HaplotypeScore=44.9484;InbreedingCoeff=0.9301;MQ=83.86;MQ0=0;MQRankSum=-2.001;QD=32.55;ReadPosRankSum=1.401;VQSLOD=3.3167;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:51.17:713,51,0	0/0:3,0:3:9.03:0,9,141	0/0:12,0:12:36.12:0,36,556	0/0:13,0:13:35.48:0,35,504	0/0:24,0:24:72.23:0,72,1128	0/0:11,0:11:30.10:0,30,480	0/0:16,0:16:48.16:0,48,764	0/0:43,0:43:99:0,129,2021	0/0:13,0:13:39.13:0,39,618	0/0:18,0:18:54.18:0,54,844	0/0:7,0:7:21.07:0,21,336	0/0:16,0:16:33.11:0,33,527	0/0:15,0:15:42.14:0,42,670	0/0:12,0:12:33.11:0,33,528	0/0:15,0:15:45.15:0,45,719	0/0:8,0:8:18.06:0,18,287	0/0:17,0:17:39.11:0,39,597	0/0:23,0:23:63.21:0,63,1006	0/0:16,0:16:45.15:0,45,720	0/0:9,0:9:27.09:0,27,432	0/0:10,0:10:30.10:0,30,479	0/0:14,0:14:39.13:0,39,623	0/0:11,0:11:27.09:0,27,431	0/0:11,0:11:27.09:0,27,429	0/0:15,0:15:45.15:0,45,720	0/0:14,0:14:42.14:0,42,671	0/0:18,0:18:54.17:0,54,840	0/0:20,0:20:54.18:0,54,863
chr10	101163090	.	AT	A	4215.88	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=9.888;DP=381;FS=12.101;HRun=9;HaplotypeScore=51.3856;InbreedingCoeff=0.8790;MQ=66.79;MQ0=0;MQRankSum=-0.704;QD=19.79;ReadPosRankSum=-1.784;VQSLOD=3.5944;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,5:7:20.99:186,21,0	1/1:0,6:6:9:82,9,0	0/0:7,0:7:17.53:0,18,170	0/1:10,0:8:12.68:13,0,78	0/0:26,0:26:51.05:0,51,806	0/0:14,0:14:39.12:0,39,450	0/0:6,0:6:15.03:0,15,161	1/1:7,24:31:72.02:659,72,0	0/0:11,0:11:33.10:0,33,381	0/0:10,0:10:27.08:0,27,309	0/0:7,0:8:20.88:0,21,214	1/1:0,0:8:16.30:48,16,0	0/0:14,0:14:39.12:0,39,450	0/0:19,0:19:57.16:0,57,648	1/1:0,17:17:48.03:439,48,0	1/1:5,7:12:23.99:214,24,0	0/0:7,0:7:21.02:0,21,219	0/0:32,0:32:84.23:0,84,958	1/1:1,14:15:42.02:384,42,0	1/1:2,17:19:50.99:459,51,0	1/1:0,9:9:24.01:219,24,0	1/1:1,0:6:9.96:29,10,0	1/1:0,0:5:10.19:30,10,0	1/1:0,0:3:1.90:6,2,0	0/0:14,0:14:39.11:0,39,442	1/1:3,21:24:31.41:538,31,0	1/1:4,22:26:38.48:524,38,0	1/1:0,15:15:42.02:384,42,0
chr10	101163152	.	AGTT	A	444.93	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=7.321;DP=415;FS=1.993;HRun=0;HaplotypeScore=86.2242;InbreedingCoeff=0.9341;MQ=74.87;MQ0=0;MQRankSum=-6.150;QD=21.19;ReadPosRankSum=2.137;VQSLOD=3.6083;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:24.08:0,24,506	0/0:3,0:3:9.03:0,9,202	0/0:12,0:12:28.28:0,28,574	0/0:9,0:9:17.90:0,18,350	0/0:24,0:24:72.25:0,72,1660	0/0:18,0:18:54.17:0,54,1197	0/0:7,0:7:21.07:0,21,484	0/0:37,0:37:99:0,105,2366	0/0:15,0:15:45.15:0,45,1019	0/0:15,0:15:42.14:0,42,945	0/0:9,0:9:27.09:0,27,564	1/1:2,10:12:33.08:351,33,0	0/0:11,0:11:33.11:0,33,740	0/0:13,0:13:39.13:0,39,899	0/0:25,0:25:72.25:0,72,1661	0/0:22,0:22:66.18:0,66,1423	0/0:7,0:7:21.07:0,21,460	0/0:23,0:23:60.18:0,60,1306	0/0:20,0:20:54.19:0,54,1229	0/0:24,0:24:69.24:0,69,1574	0/0:6,0:6:15.05:0,15,301	1/1:2,4:6:12.03:129,12,0	1/1:0,3:3:9.02:98,9,0	./.	0/0:12,0:12:36.12:0,36,831	0/0:23,0:23:63.22:0,63,1439	0/0:33,0:33:93.32:0,93,2113	0/0:14,0:14:38.81:0,39,897
chr10	101163158	.	AATATT	A	713.58	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=7.110;DP=399;FS=0.939;HRun=0;HaplotypeScore=96.9983;InbreedingCoeff=0.9291;MQ=72.79;MQ0=0;MQRankSum=-6.850;QD=39.64;ReadPosRankSum=2.014;VQSLOD=3.8149;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:24.08:0,24,365	0/0:3,0:3:9.03:0,9,298	0/0:10,0:10:23.88:0,24,453	0/0:8,0:8:18.80:0,19,452	0/0:24,0:24:72.25:0,72,2198	0/0:19,0:19:57.20:0,57,1838	0/0:7,0:7:21.06:0,21,594	0/0:39,0:39:99:0,117,3526	0/0:15,0:15:45.15:0,45,1448	0/0:12,0:12:36.12:0,36,1150	0/0:9,0:9:27.09:0,27,896	1/1:1,10:11:33.09:522,33,0	0/0:12,0:12:36.11:0,36,1062	0/0:15,0:15:45.15:0,45,1447	0/0:25,0:25:75.26:0,75,2395	0/0:22,0:23:69.08:0,69,870	0/0:7,0:7:21.07:0,21,644	0/0:20,0:20:57.20:0,57,1762	0/0:20,0:20:57.19:0,57,1733	0/0:22,0:22:66.23:0,66,2183	0/0:4,0:4:12.04:0,12,248	1/1:0,4:4:12.04:203,12,0	1/1:0,3:3:9:122,9,0	./.	0/0:12,0:12:36.12:0,36,1019	0/0:20,0:20:60.21:0,60,1861	0/0:31,0:31:93.32:0,93,2886	0/0:15,0:15:42.14:0,42,1231
chr10	101163160	.	TA	T	714.07	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=9.672;DP=398;FS=6.999;HRun=2;HaplotypeScore=63.4683;InbreedingCoeff=0.8411;MQ=71.76;MQ0=0;MQRankSum=-3.378;QD=12.31;ReadPosRankSum=1.978;VQSLOD=2.1052;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:24.04:311,24,0	0/0:3,0:3:9.03:0,9,121	0/1:10,0:10:6.45:6,0,154	0/0:7,0:7:16.02:0,16,170	0/0:24,0:24:72.16:0,72,910	0/0:19,0:19:57.17:0,57,750	0/0:6,0:6:18.05:0,18,229	0/0:38,0:38:99:0,114,1471	0/0:16,0:16:48.15:0,48,635	0/0:12,0:12:36.11:0,36,478	0/0:9,0:9:27.09:0,27,368	1/1:11,0:11:23.78:78,24,0	0/0:12,0:12:33.08:0,33,432	0/0:17,0:17:43.94:0,44,580	0/0:25,0:25:75.21:0,75,971	1/1:4,18:22:18.51:435,19,0	0/0:8,0:8:24.03:0,24,289	0/0:19,0:19:57.12:0,57,724	0/0:19,0:19:54.15:0,54,692	0/0:22,0:22:66.21:0,66,884	0/0:5,0:5:12.44:0,12,109	1/1:4,0:4:8.15:26,8,0	1/1:3,0:3:6.57:22,7,0	./.	0/0:12,0:12:33.53:0,34,388	0/0:20,0:20:59.95:0,60,724	0/0:31,0:31:93.16:0,93,1155	0/0:15,0:15:41.79:0,42,493
chr10	101163202	.	T	TA	203.67	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.663;DP=400;FS=11.636;HRun=0;HaplotypeScore=54.3163;InbreedingCoeff=0.8365;MQ=69.72;MQ0=0;MQRankSum=-5.708;QD=12.73;ReadPosRankSum=0.304;VQSLOD=3.4035;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:30.04:0,30,378	0/0:5,0:5:15.05:0,15,210	0/0:10,0:10:2.19:0,2,154	0/0:1,0:1:2.99:0,3,23	0/0:23,0:23:66.20:0,66,892	0/0:20,0:20:60.18:0,60,808	0/0:8,0:8:24.06:0,24,290	0/0:28,0:28:84.27:0,84,1146	0/0:18,0:18:51.17:0,51,713	0/0:14,0:14:42.13:0,42,561	0/0:12,0:12:33.10:0,33,446	1/1:0,5:5:14.95:118,15,0	0/0:20,0:20:57.18:0,57,768	0/0:19,0:19:57.19:0,57,795	0/0:23,0:23:69.19:0,69,929	0/0:22,0:22:66.20:0,66,890	0/0:6,0:6:18.06:0,18,251	0/0:19,0:19:51.13:0,51,690	0/0:22,0:22:66.22:0,66,922	0/0:23,0:23:69.21:0,69,919	0/0:10,0:10:27.09:0,27,377	1/1:0,5:5:14.94:115,15,0	1/1:0,3:3:8.97:70,9,0	1/1:0,3:3:5.97:44,6,0	0/0:5,0:5:15.05:0,15,210	0/0:18,0:18:54.17:0,54,727	0/0:31,0:31:90.25:0,90,1189	0/0:17,0:17:48.07:0,48,626
chr10	101163203	.	TCTCC	T	462.99	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=6.540;DP=391;FS=11.638;HRun=0;HaplotypeScore=75.7040;InbreedingCoeff=0.9292;MQ=71.10;MQ0=0;MQRankSum=-6.449;QD=28.94;ReadPosRankSum=0.739;VQSLOD=2.2386;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:27.09:0,27,763	0/0:5,0:5:15.05:0,15,424	0/0:11,0:11:18.05:0,18,427	./.	0/0:23,0:23:69.24:0,69,1888	0/0:20,0:20:60.21:0,60,1655	0/0:9,0:9:27.09:0,27,755	0/0:27,0:27:81.28:0,81,2246	0/0:18,0:18:54.19:0,54,1507	0/0:14,0:14:42.14:0,42,1186	0/0:12,0:12:36.12:0,36,996	1/1:0,5:5:15.05:205,15,0	0/0:19,0:19:57.20:0,57,1609	0/0:19,0:19:57.18:0,57,1498	0/0:21,0:21:63.22:0,63,1784	0/0:20,0:20:60.21:0,60,1699	0/0:6,0:6:18.06:0,18,510	0/0:18,0:18:54.19:0,54,1485	0/0:22,0:22:66.23:0,66,1851	0/0:23,0:23:69.24:0,69,1889	0/0:10,0:10:30.10:0,30,833	1/1:0,5:5:15.05:201,15,0	1/1:0,3:3:9.03:122,9,0	1/1:0,3:3:6.02:79,6,0	0/0:5,0:5:15.05:0,15,425	0/0:18,0:18:54.19:0,54,1481	0/0:31,0:31:90.31:0,90,2509	0/0:15,0:15:42.13:0,42,1127
chr10	101163493	.	A	AT	741.22	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.391;DP=562;FS=3.846;HRun=3;HaplotypeScore=64.8266;InbreedingCoeff=0.9836;MQ=88.44;MQ0=0;MQRankSum=-7.223;QD=16.85;ReadPosRankSum=-0.424;VQSLOD=3.1710;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:27.08:0,27,321	0/0:12,0:12:36.10:0,36,420	0/0:23,0:23:66.18:0,66,770	0/0:23,0:23:51.07:0,51,591	0/0:30,0:30:84.26:0,84,1007	0/0:19,0:19:57.17:0,57,684	0/0:20,0:20:60.18:0,60,716	0/0:22,0:22:57.15:0,57,662	0/0:22,0:22:60.18:0,60,718	0/0:30,0:30:90.28:0,90,1080	0/0:32,0:32:90.25:0,90,1056	1/1:4,7:11:21.04:258,21,0	0/0:28,0:28:84.26:0,84,1006	0/0:23,0:23:69.21:0,69,827	0/0:25,0:25:75.23:0,75,900	0/0:17,0:17:51.16:0,51,612	0/0:6,0:6:18.06:0,18,216	0/0:13,0:13:36.08:0,36,413	0/0:23,0:23:60.18:0,60,720	0/0:46,0:46:99:0,132,1559	0/0:12,0:12:33.10:0,33,395	1/1:2,10:12:21.07:278,21,0	1/1:4,9:13:20.98:224,21,0	1/1:2,6:8:11.50:137,11,0	0/0:19,0:19:51.12:0,51,597	0/0:18,0:18:48.15:0,48,575	0/0:38,0:38:99:0,108,1295	0/0:8,0:8:24.07:0,24,288
chr10	101163604	.	GA	G	8470.41	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=11.300;DP=579;FS=1.781;HRun=2;HaplotypeScore=72.5380;InbreedingCoeff=0.9730;MQ=85.02;MQ0=0;MQRankSum=-1.053;QD=35.74;ReadPosRankSum=1.815;VQSLOD=5.4540;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:36.12:0,36,539	1/1:1,14:15:36.12:467,36,0	0/0:25,0:25:63.20:0,63,1015	0/0:13,0:13:39.13:0,39,556	0/0:33,0:33:93.30:0,93,1357	0/0:29,0:29:84.28:0,84,1259	0/0:11,0:11:30.10:0,30,450	1/1:1,29:30:87.28:1128,87,0	0/0:19,0:19:57.19:0,57,853	0/0:31,0:31:93.31:0,93,1375	0/0:19,0:19:57.18:0,57,833	0/0:11,0:11:24.08:0,24,359	0/0:31,0:31:93.29:0,93,1354	0/0:21,0:21:63.21:0,63,941	1/1:0,36:36:96.31:1243,96,0	1/1:0,22:22:63.20:818,63,0	0/0:12,0:12:36.12:0,36,539	0/0:15,0:15:42.14:0,42,623	1/1:0,13:13:39.13:505,39,0	1/1:0,29:29:87.28:1122,87,0	1/1:0,13:13:33.11:428,33,0	0/0:10,0:10:30.10:0,30,438	0/0:16,0:16:39.13:0,39,552	0/0:5,0:5:3.01:0,3,45	0/0:29,0:29:87.29:0,87,1287	1/1:1,24:25:30.28:888,30,0	1/1:0,47:47:99:1597,123,0	1/1:0,7:7:21.07:273,21,0
chr10	101163818	.	ACAAG	A	2084.81	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.176;DP=689;FS=26.486;HRun=0;HaplotypeScore=117.9701;InbreedingCoeff=0.9401;MQ=78.13;MQ0=0;MQRankSum=-9.618;QD=42.55;ReadPosRankSum=-2.479;VQSLOD=1.3289;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.22:0,69,1876	0/0:22,0:22:66.20:0,66,1736	0/0:20,0:20:57.17:0,57,1501	0/0:22,0:22:60.14:0,60,1438	0/0:30,0:30:90.13:0,90,2450	0/0:35,0:35:99:0,105,2901	0/0:17,0:17:51.18:0,51,1472	0/0:41,0:41:99:0,123,2975	0/0:22,0:22:66.23:0,66,1902	0/0:33,0:33:99:0,99,2745	0/0:31,0:31:93.28:0,93,2494	1/1:0,5:5:12.03:215,12,0	0/0:35,0:35:99:0,105,2683	0/0:26,0:26:78.25:0,78,2107	0/0:38,0:38:99:0,114,3143	0/0:28,0:28:84.19:0,84,2202	0/0:17,0:17:50.96:0,51,1239	0/0:23,0:23:69.18:0,69,1822	0/0:20,0:20:60.14:0,60,1433	0/0:35,0:35:99:0,105,2836	0/0:18,0:18:51.15:0,51,1381	1/1:0,16:16:39.13:801,39,0	1/1:0,24:24:60.12:1200,60,0	1/1:0,4:4:2.92:17,3,0	0/0:28,0:28:84.23:0,84,2183	0/0:23,0:23:69.23:0,69,1927	0/0:38,0:38:99:0,114,2918	0/0:15,0:15:45.11:0,45,1174
chr10	101163961	.	CAT	C	819.75	PASS	AB=0.538;AC=7;AF=0.125;AN=56;BaseQRankSum=11.354;DP=674;FS=18.287;HRun=0;HaplotypeScore=123.0026;InbreedingCoeff=0.8911;MQ=92.41;MQ0=0;MQRankSum=-10.835;QD=13.44;ReadPosRankSum=0.881;VQSLOD=2.2538;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,2481	0/0:10,0:10:30.08:0,30,570	0/0:30,0:30:84.27:0,84,1605	0/0:28,0:28:75.26:0,75,1465	0/0:22,0:22:66.23:0,66,1340	0/0:26,0:26:78.24:0,78,1490	0/0:12,0:12:36.12:0,36,687	0/0:47,0:47:99:0,141,2767	0/0:21,0:21:63.22:0,63,1246	0/0:24,0:24:69.23:0,69,1316	0/0:23,0:23:69.22:0,69,1337	1/1:1,17:18:46.93:325,47,0	0/0:36,0:36:99:0,108,2142	0/0:22,0:22:66.21:0,66,1292	0/0:41,0:41:99:0,123,2482	0/0:20,0:20:57.20:0,57,1158	0/0:30,0:30:90.31:0,90,1828	0/0:13,0:13:36.12:0,36,731	0/0:21,0:21:63.21:0,63,1228	0/0:22,0:22:63.19:0,63,1207	0/0:30,0:30:87.26:0,87,1727	1/1:3,18:21:39.30:367,39,0	1/1:2,13:15:32.62:224,33,0	0/1:1,6:7:3.34:53,0,3	0/0:24,0:24:72.25:0,72,1445	0/0:36,0:36:99:0,108,2178	0/0:27,0:27:81.28:0,81,1645	0/0:7,0:7:21.07:0,21,427
chr10	101163964	.	GCA	G	902.32	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.554;DP=675;FS=19.622;HRun=0;HaplotypeScore=120.6605;InbreedingCoeff=0.9818;MQ=95.32;MQ0=0;MQRankSum=-11.096;QD=15.56;ReadPosRankSum=0.739;VQSLOD=2.4213;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,2722	0/0:9,0:9:27.07:0,27,510	0/0:33,0:33:92.90:0,93,1792	0/0:31,0:31:84.27:0,84,1612	0/0:23,0:23:69.24:0,69,1402	0/0:24,0:24:72.25:0,72,1451	0/0:12,0:12:36.12:0,36,714	0/0:49,0:49:99:0,147,2924	0/0:20,0:20:60.21:0,60,1210	0/0:21,0:21:60.21:0,60,1219	0/0:24,0:24:72.25:0,72,1430	1/1:2,17:19:47.62:345,48,0	0/0:33,0:33:99:0,99,2011	0/0:22,0:22:66.23:0,66,1341	0/0:41,0:41:99:0,123,2499	0/0:20,0:20:57.20:0,57,1158	0/0:32,0:32:96.33:0,96,1913	0/0:14,0:14:39.13:0,39,773	0/0:21,0:21:63.22:0,63,1260	0/0:20,0:20:60.21:0,60,1219	0/0:30,0:30:90.31:0,90,1796	1/1:2,18:20:53.66:403,54,0	1/1:0,13:13:35.64:245,36,0	1/1:0,6:6:8.94:66,9,0	0/0:24,0:24:72.23:0,72,1397	0/0:35,0:35:99:0,105,2133	0/0:27,0:27:81.28:0,81,1646	0/0:7,0:7:21.07:0,21,427
chr10	101164420	.	TC	T	2096.39	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.399;DP=641;FS=2.170;HRun=6;HaplotypeScore=80.9486;InbreedingCoeff=0.9987;MQ=87.41;MQ0=0;MQRankSum=-1.179;QD=24.66;ReadPosRankSum=3.271;VQSLOD=3.8492;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,114,1469	0/0:13,0:13:33.11:0,33,427	0/0:24,0:24:41.38:0,41,661	0/0:22,0:22:47.27:0,47,558	0/0:31,0:31:87.27:0,87,1128	0/0:22,0:21:63.20:0,63,828	0/0:19,0:19:51.17:0,51,671	0/0:33,0:33:84.73:0,85,1081	0/0:21,0:21:60.17:0,60,769	0/0:27,0:27:78.24:0,78,1007	0/0:9,0:9:24.08:0,24,316	1/1:1,19:20:48.12:516,48,0	0/0:21,0:21:60.17:0,60,759	0/0:20,0:20:60.17:0,60,758	0/0:27,0:27:72.23:0,72,947	0/0:28,0:28:83.75:0,84,681	0/0:24,0:24:63.18:0,63,800	0/0:12,0:13:38.99:0,39,488	0/0:22,0:22:57.19:0,57,750	0/0:29,0:29:69.21:0,69,892	0/0:27,0:27:75.22:0,75,970	1/1:0,25:25:63.16:677,63,0	1/1:0,17:17:42.11:451,42,0	1/1:4,19:23:57.14:613,57,0	0/0:30,0:30:90.27:0,90,1166	0/0:14,0:14:42.14:0,42,552	0/0:29,0:29:78.23:0,78,1009	0/0:9,0:9:24.08:0,24,316
chr10	101164462	.	AT	A	5689.74	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=7.858;DP=608;FS=0.334;HRun=6;HaplotypeScore=68.2645;InbreedingCoeff=0.9997;MQ=77.40;MQ0=0;MQRankSum=-2.929;QD=27.75;ReadPosRankSum=-0.725;VQSLOD=5.0583;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1271	1/1:0,12:12:30.07:322,30,0	0/0:18,0:18:45.14:0,45,567	0/0:15,0:15:36.09:0,36,421	0/0:32,0:32:96.29:0,96,1234	0/0:20,0:19:60.18:0,60,775	0/0:14,0:14:36.12:0,36,474	1/1:8,29:37:87.19:919,87,0	0/0:26,0:26:78.25:0,78,1026	0/0:21,0:21:54.18:0,54,710	0/0:21,0:21:60.18:0,60,773	0/0:18,0:18:51.17:0,51,671	0/0:18,0:18:54.18:0,54,711	0/0:16,0:16:45.15:0,45,592	1/1:3,25:28:72.18:774,72,0	0/0:19,0:19:51.17:0,51,671	0/0:21,0:21:57.15:0,57,731	0/0:16,0:16:42.14:0,42,552	1/1:1,16:17:48.12:516,48,0	1/1:2,31:33:87.21:934,87,0	1/1:1,10:11:30.07:322,30,0	0/0:16,0:16:48.16:0,48,631	0/0:26,0:26:66.21:0,66,856	0/0:21,0:21:60.20:0,60,789	0/0:30,0:30:90.29:0,90,1184	1/1:0,20:20:60.15:645,60,0	1/1:1,35:36:87.21:935,87,0	1/1:1,10:11:30.08:322,30,0
chr10	101164686	.	A	AGAC	3503.31	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=10.693;DP=445;FS=74.739;HRun=0;HaplotypeScore=77.8158;InbreedingCoeff=0.9756;MQ=93.95;MQ0=0;MQRankSum=-12.386;QD=45.50;ReadPosRankSum=-1.109;VQSLOD=0.9532;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.16:0,54,971	1/1:0,5:5:15.05:267,15,0	0/0:25,0:25:69.22:0,69,1235	0/0:18,0:17:47.87:0,48,652	0/0:29,0:29:87.28:0,87,1583	0/0:26,0:26:78.25:0,78,1415	0/0:11,0:11:33.11:0,33,615	1/1:3,9:12:30.03:542,30,0	0/0:9,0:9:24.08:0,24,439	0/0:13,0:13:39.13:0,39,696	0/0:23,0:23:69.24:0,69,1284	0/0:18,0:18:54.16:0,54,961	0/0:25,0:25:75.26:0,75,1386	0/0:18,0:18:51.17:0,51,950	1/1:0,8:8:24.08:422,24,0	0/0:21,0:21:63.22:0,63,1175	0/0:35,0:35:99:0,105,1924	0/0:23,0:23:66.23:0,66,1214	1/1:2,7:9:24.07:430,24,0	1/1:2,9:12:33.09:575,33,0	1/1:0,5:5:15.05:275,15,0	0/0:8,0:8:24.08:0,24,447	0/0:10,0:10:30.10:0,30,559	0/0:20,0:20:60.21:0,60,1096	0/0:17,0:17:48.15:0,48,864	1/1:2,8:9:21.03:406,21,0	1/1:2,9:11:27.09:473,27,0	1/1:3,2:5:5.84:114,6,0
chr10	101164726	.	A	AC	206.15	PASS	AB=0.691;AC=4;AF=0.071;AN=56;BaseQRankSum=9.358;DP=541;FS=0.843;HRun=0;HaplotypeScore=81.6887;InbreedingCoeff=-0.0827;MQ=75.57;MQ0=0;MQRankSum=-8.942;QD=2.10;ReadPosRankSum=0.521;VQSLOD=2.3408;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:42.14:0,42,586	0/0:4,4:10:7.09:0,7,124	0/0:15,0:15:39.13:0,39,521	0/0:18,0:17:42.07:0,42,545	0/0:31,0:31:90.29:0,90,1241	0/0:19,0:19:57.19:0,57,789	0/0:12,0:12:36.12:0,36,504	0/0:37,3:42:33.75:0,34,1259	0/0:14,0:14:42.14:0,42,587	0/0:18,0:18:54.18:0,54,755	0/0:16,0:16:48.16:0,48,671	0/0:24,0:24:72.24:0,72,1006	0/0:21,0:21:63.20:0,63,864	0/0:18,0:18:54.18:0,54,755	0/0:4,2:6:11.04:0,11,146	0/0:23,0:23:69.22:0,69,949	0/0:41,0:41:99:0,114,1560	0/0:20,0:20:57.19:0,57,797	0/0:16,0:16:48.13:0,48,645	0/1:10,10:23:54.80:55,0,364	0/0:5,0:5:12.03:0,12,151	0/0:7,0:7:21.06:0,21,278	0/0:14,0:14:39.09:0,39,523	0/0:16,0:16:48.16:0,48,671	0/0:23,0:23:69.23:0,69,965	0/1:15,2:22:15.53:16,0,515	0/1:16,9:32:99:144,0,540	0/1:12,5:21:99:100,0,452
chr10	101165097	.	GT	G	318.46	PASS	AB=0.948;AC=17;AF=0.304;AN=56;BaseQRankSum=-0.074;DP=616;FS=9.153;HRun=15;HaplotypeScore=118.7765;InbreedingCoeff=0.0972;MQ=63.65;MQ0=7;MQRankSum=2.825;QD=0.94;ReadPosRankSum=2.810;VQSLOD=-0.5946;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,12:21:28.80:206,29,0	0/0:9,0:9:5.66:0,6,33	0/1:38,0:16:4.61:5,0,60	0/1:42,0:15:6.55:7,0,75	0/0:29,1:30:47.52:0,48,472	0/0:20,0:20:41.95:0,42,356	0/0:13,1:15:20.38:0,20,256	0/1:25,1:32:18.96:46,0,19	0/0:19,0:20:14.62:0,15,220	0/1:26,2:29:11.09:11,0,296	0/0:20,3:24:10.20:0,10,302	0/0:15,0:15:22.41:0,22,85	0/0:20,0:19:53.46:0,53,448	0/0:19,0:19:31.02:0,31,212	0/1:14,0:18:13.51:14,0,51	1/1:14,0:20:32.95:136,33,0	0/1:24,2:27:4.10:4,0,244	0/0:26,0:28:14.64:0,15,321	0/1:18,0:18:4.64:5,0,53	0/1:24,0:25:4.39:4,0,60	1/1:7,0:7:2.50:7,2,0	0/0:16,0:16:24.79:0,25,95	0/0:19,0:18:12.59:0,13,48	0/0:17,0:17:16.97:0,17,64	0/0:18,0:25:29.67:0,30,236	0/1:24,0:24:20.63:21,0,86	0/1:17,1:20:3.57:4,0,67	0/1:12,1:13:8.06:8,0,35
chr10	101165102	.	T	TG	571.20	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.082;DP=639;FS=8.544;HRun=0;HaplotypeScore=120.1222;InbreedingCoeff=0.9723;MQ=61.68;MQ0=12;MQRankSum=-3.399;QD=7.93;ReadPosRankSum=2.499;VQSLOD=3.5679;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:62.70:0,63,514	0/0:8,0:8:14.51:0,15,96	0/0:49,0:17:43.13:0,43,355	0/0:48,0:15:22.71:0,23,238	0/0:30,0:30:85.81:0,86,923	0/0:20,0:20:60.11:0,60,683	0/0:16,0:16:39.47:0,39,459	0/0:34,0:34:65.87:0,66,448	0/0:15,0:15:39.28:0,39,406	0/0:30,0:30:84.47:0,84,845	0/0:24,0:24:70.26:0,70,721	1/1:16,2:18:35.51:262,36,0	0/0:22,0:21:62.70:0,63,673	0/0:16,0:16:41.46:0,41,413	0/0:18,0:18:49.47:0,49,343	0/0:20,0:20:58.38:0,58,484	0/0:26,0:26:67.11:0,67,655	0/0:27,0:27:66.82:0,67,667	0/0:20,0:19:51.93:0,52,380	0/0:23,0:23:52.77:0,53,357	0/0:9,0:8:8.90:0,9,62	1/1:20,0:20:22.39:215,22,0	1/1:17,0:16:16.69:93,17,0	1/1:15,2:17:20.68:160,21,0	0/0:25,0:24:41.57:0,42,457	0/0:23,0:23:57.40:0,57,438	0/0:24,0:24:40.77:0,41,285	0/0:16,0:16:26.38:0,26,186
chr10	101165108	.	T	TGTTTTG	6390.82	PASS	AB=0.627;AC=16;AF=0.286;AN=56;BaseQRankSum=2.904;DP=653;FS=2.362;HRun=0;HaplotypeScore=153.9558;InbreedingCoeff=0.2909;MQ=61.66;MQ0=12;MQRankSum=-7.743;QD=25.16;ReadPosRankSum=4.204;VQSLOD=4.4362;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:65.69:0,66,931	0/1:2,0:9:10.98:229,0,11	0/0:52,0:18:44.34:0,44,360	0/0:53,0:17:36.71:0,37,289	0/0:28,0:28:78.97:0,79,1233	0/0:19,0:19:57.16:0,57,999	0/0:17,0:17:39.79:0,40,739	0/1:17,0:35:78.38:527,0,78	0/0:16,0:16:41.98:0,42,719	0/0:27,0:27:77.15:0,77,1155	0/0:24,0:24:68.14:0,68,1077	1/1:2,14:17:27.09:760,27,0	0/0:21,0:20:59.42:0,59,912	0/0:17,0:17:44.14:0,44,525	0/1:17,0:19:91.06:408,0,91	0/0:20,0:20:59.76:0,60,730	0/0:24,0:24:65.87:0,66,1041	0/0:24,0:24:64.72:0,65,967	0/1:8,0:20:52.59:556,0,53	0/1:4,0:21:40.24:542,0,40	0/0:2,0:8:5.75:0,6,30	1/1:0,19:20:41.97:985,42,0	1/1:2,16:18:14.94:413,15,0	1/1:2,17:21:21.07:544,21,0	0/0:23,0:22:39.11:0,39,722	0/1:6,0:28:93.73:719,0,94	0/1:7,0:24:73.69:410,0,74	0/1:5,0:20:69.30:297,0,69
chr10	101166687	.	G	GT	12227.52	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=15.593;DP=630;FS=2.097;HRun=3;HaplotypeScore=84.9773;InbreedingCoeff=0.9920;MQ=87.04;MQ0=0;MQRankSum=-2.367;QD=36.61;ReadPosRankSum=2.960;VQSLOD=5.4353;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:54.18:755,54,0	1/1:0,11:11:30.10:420,30,0	0/0:31,0:31:84.24:0,84,991	0/0:17,0:16:41.44:0,41,447	0/0:22,0:22:57.13:0,57,648	0/0:24,0:24:72.21:0,72,852	0/0:19,0:19:54.11:0,54,602	1/1:3,32:35:96.32:1342,96,0	0/0:22,0:22:63.18:0,63,744	0/0:28,0:28:78.24:0,78,936	0/0:19,0:19:57.17:0,57,674	1/1:1,20:21:51.17:714,51,0	0/0:35,0:35:99:0,99,1173	0/0:23,0:23:69.20:0,69,815	1/1:1,22:23:54.18:756,54,0	1/1:2,17:19:48.16:672,48,0	0/0:18,0:18:54.17:0,54,648	0/0:13,0:13:36.08:0,36,417	1/1:3,19:22:60.20:837,60,0	1/1:3,29:33:93.31:1292,93,0	1/1:0,14:14:42.14:588,42,0	1/1:0,16:16:45.15:629,45,0	1/1:1,25:26:63.21:881,63,0	1/1:1,18:19:48.16:664,48,0	0/0:25,0:25:72.17:0,72,825	1/1:5,25:30:9.26:975,9,0	1/1:3,33:36:99:1385,99,0	1/1:1,7:8:24.06:318,24,0
chr10	101166855	.	T	TATC	17994.98	PASS	AB=0.529;AC=29;AF=0.518;AN=56;BaseQRankSum=-15.813;DP=616;FS=4.060;HRun=0;HaplotypeScore=84.3047;InbreedingCoeff=0.9270;MQ=74.81;MQ0=0;MQRankSum=-6.652;QD=55.54;ReadPosRankSum=0.555;VQSLOD=7.0293;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:27:55.61:1303,56,0	1/1:0,9:9:18.06:413,18,0	0/0:13,0:13:30.07:0,30,409	0/0:16,0:15:29.70:0,30,406	0/0:25,0:25:68.97:0,69,1155	0/0:25,0:25:75.26:0,75,1278	0/0:26,0:26:78.25:0,78,1292	1/1:4,22:27:72.18:1450,72,0	0/0:19,0:19:51.14:0,51,835	0/0:30,0:30:84.28:0,84,1390	0/0:19,0:19:54.15:0,54,879	1/1:1,19:20:45.15:1031,45,0	0/0:19,0:19:57.20:0,57,971	0/0:19,0:19:57.18:0,57,945	1/1:1,26:28:75.26:1677,75,0	1/1:0,19:19:45.15:1030,45,0	0/0:22,0:22:66.20:0,66,1096	0/0:20,0:20:57.19:0,57,964	1/1:3,17:21:60.21:1289,60,0	1/1:3,24:26:57.20:1304,57,0	1/1:1,14:15:27.09:618,27,0	1/1:2,12:14:36.12:772,36,0	1/1:0,21:21:56.93:1303,57,0	1/1:0,14:14:32.98:756,33,0	0/0:39,0:39:99:0,105,1755	0/1:4,31:36:43.07:2049,0,43	1/1:1,29:30:90.31:2036,90,0	1/1:0,15:15:42.14:963,42,0
chr10	101167263	.	C	CT	1188.20	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.674;DP=612;FS=3.819;HRun=0;HaplotypeScore=87.9969;InbreedingCoeff=0.9935;MQ=87.34;MQ0=1;MQRankSum=-11.155;QD=15.43;ReadPosRankSum=1.882;VQSLOD=5.7443;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:93.17:0,93,1215	0/0:6,0:6:18.06:0,18,252	0/0:26,0:27:75.70:0,76,1011	0/0:24,0:24:72.24:0,72,992	0/0:23,0:23:66.19:0,66,889	0/0:21,0:21:63.21:0,63,879	0/0:27,0:27:78.22:0,78,1065	0/0:28,0:28:84.26:0,84,1142	0/0:28,0:28:81.25:0,81,1099	0/0:13,0:13:39.13:0,39,533	0/0:12,0:12:36.09:0,36,483	1/1:8,20:28:57.52:534,58,0	0/0:21,0:21:57.13:0,57,755	0/0:29,0:29:87.28:0,87,1201	0/0:28,0:27:75.72:0,76,1050	0/0:10,0:10:27.09:0,27,378	0/0:29,0:29:87.29:0,87,1217	0/0:31,0:31:87.28:0,87,1199	0/0:18,0:18:51.15:0,51,694	0/0:24,0:24:69.17:0,69,960	0/0:27,0:27:69.23:0,69,963	1/1:1,14:15:41.81:316,42,0	1/1:2,15:17:47.76:359,48,0	1/1:3,14:17:19.39:139,19,0	0/0:13,0:13:39.13:0,39,544	0/0:34,0:34:99:0,99,1369	0/0:17,0:17:51.16:0,51,696	0/0:6,0:6:18.06:0,18,252
chr10	101167264	.	C	CTGTG	3830.72	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.225;DP=627;FS=5.551;HRun=0;HaplotypeScore=118.9101;InbreedingCoeff=0.9947;MQ=86.49;MQ0=1;MQRankSum=-11.192;QD=44.03;ReadPosRankSum=1.571;VQSLOD=3.9235;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:90.27:0,90,1808	0/0:6,0:6:18.06:0,18,378	0/0:27,0:27:71.44:0,71,1408	0/0:24,0:24:72.25:0,72,1433	0/0:22,0:22:63.22:0,63,1306	0/0:21,0:21:63.22:0,63,1301	0/0:27,0:27:81.26:0,81,1614	0/0:29,0:29:84.26:0,84,1623	0/0:28,0:28:84.27:0,84,1652	0/0:14,0:14:39.13:0,39,791	0/0:12,0:12:36.11:0,36,698	1/1:10,20:30:79.50:1548,80,0	0/0:22,0:22:57.17:0,57,1129	0/0:30,0:30:87.29:0,87,1788	0/0:28,0:27:78.25:0,78,1594	0/0:12,0:12:30.09:0,30,572	0/0:29,0:29:87.30:0,87,1805	0/0:31,0:31:87.28:0,87,1726	0/0:18,0:18:54.18:0,54,1061	0/0:25,0:25:69.11:0,69,1445	0/0:27,0:27:69.24:0,69,1447	1/1:6,14:20:45.15:919,45,0	1/1:3,15:18:45.15:914,45,0	1/1:5,14:19:23.98:450,24,0	0/0:13,0:13:39.13:0,39,777	0/0:33,0:33:99:0,99,2016	0/0:17,0:17:51.18:0,51,1054	0/0:6,0:6:18.06:0,18,378
chr10	101167336	.	G	GGTGT	7172.44	PASS	AB=0.749;AC=17;AF=0.304;AN=56;BaseQRankSum=5.296;DP=738;FS=9.342;HRun=0;HaplotypeScore=174.5877;InbreedingCoeff=0.7218;MQ=62.68;MQ0=6;MQRankSum=-12.325;QD=29.16;ReadPosRankSum=-4.635;VQSLOD=3.0860;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,12:39:13.39:1196,13,0	1/1:6,7:13:24.05:489,24,0	0/0:33,0:19:23.90:0,24,272	0/0:31,0:19:7.99:0,8,123	0/0:17,0:20:42.12:0,42,595	0/0:24,0:24:48.14:0,48,732	0/0:28,0:28:45.02:0,45,628	1/1:27,6:32:60.86:1045,61,0	0/0:31,0:33:84.20:0,84,1263	0/0:30,0:30:66.20:0,66,1007	0/0:12,0:12:36.10:0,36,548	0/0:37,0:37:80.86:0,81,747	0/0:27,0:30:57.19:0,57,927	0/0:30,0:31:54.18:0,54,860	1/1:12,12:26:56.66:1231,57,0	0/0:21,0:21:60.07:0,60,642	0/0:34,0:36:79.59:0,80,1335	0/0:22,0:23:54.16:0,54,843	1/1:11,4:15:14.77:256,15,0	0/1:10,8:19:13.66:674,0,14	0/1:40,5:46:99:332,0,113	0/0:27,0:27:46.06:0,46,484	0/0:14,0:14:26.89:0,27,251	0/0:42,0:41:67.64:0,68,670	0/0:19,0:19:51.15:0,51,786	0/1:15,11:27:39.64:1003,0,40	1/1:14,5:19:36.08:728,36,0	1/1:1,2:3:9.03:220,9,0
chr10	101167357	.	G	GGT	4254.41	PASS	AB=0.531;AC=9;AF=0.161;AN=56;BaseQRankSum=-9.099;DP=746;FS=2.975;HRun=0;HaplotypeScore=159.5385;InbreedingCoeff=0.8410;MQ=58.54;MQ0=9;MQRankSum=1.895;QD=26.76;ReadPosRankSum=6.244;VQSLOD=5.3201;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:56.43:0,56,414	0/0:11,0:11:22:0,22,123	0/0:35,0:17:15.82:0,16,175	0/0:37,0:16:17.34:0,17,172	0/0:23,0:23:48.15:0,48,610	0/0:22,0:22:57.18:0,57,725	0/0:25,0:25:63.11:0,63,768	0/0:34,0:34:49.92:0,50,636	0/0:34,0:34:90.27:0,90,1137	0/0:26,0:26:60.72:0,61,885	0/0:16,0:16:45.14:0,45,567	1/1:6,34:40:75.49:1204,75,0	0/0:31,0:31:75.19:0,75,932	0/0:23,0:23:57.14:0,57,709	0/0:26,0:26:33.68:0,34,289	1/1:7,23:31:47.75:816,48,0	0/0:34,0:34:95.84:0,96,1257	0/0:21,0:21:60.19:0,60,765	0/0:9,0:7:13.85:0,14,140	0/0:15,0:15:24.15:0,24,217	0/0:45,0:48:48.95:0,49,638	1/1:4,18:22:47.95:776,48,0	1/1:1,13:14:27.05:459,27,0	0/1:6,45:51:8.81:999,0,9	0/0:25,0:25:69.19:0,69,861	0/0:28,0:28:51.23:0,51,582	0/0:18,0:16:14.19:0,14,200	0/0:3,0:3:5.01:0,5,20
chr10	101167369	.	T	TG	7525.44	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-1.217;DP=701;FS=7.845;HRun=0;HaplotypeScore=123.0745;InbreedingCoeff=0.9828;MQ=60.33;MQ0=3;MQRankSum=-7.049;QD=34.68;ReadPosRankSum=-2.821;VQSLOD=3.0123;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:34:47.69:714,48,0	1/1:0,11:11:21.07:334,21,0	0/0:24,1:15:25.88:0,26,378	0/0:29,1:12:24.01:0,24,268	0/0:21,0:21:60.20:0,60,839	0/0:21,0:21:63.21:0,63,881	0/0:22,0:22:63.12:0,63,837	1/1:2,30:32:90.26:1367,90,0	0/0:29,0:29:87.24:0,87,1178	0/0:27,0:27:75.25:0,75,1049	0/0:15,0:15:45.13:0,45,610	0/0:40,0:40:93.10:0,93,1213	0/0:27,0:27:75.25:0,75,1048	0/0:23,0:23:69.23:0,69,965	1/1:0,28:28:69.16:1040,69,0	0/0:27,0:27:54.06:0,54,718	0/0:42,0:41:99:0,126,1743	0/0:22,0:22:63.18:0,63,859	1/1:1,10:11:30.10:472,30,0	1/1:0,12:12:24.08:381,24,0	1/1:2,40:42:83.90:1273,84,0	0/0:21,0:21:59.91:0,60,752	0/0:15,0:15:36.10:0,36,470	0/0:48,0:47:72.24:0,72,1005	0/0:28,0:28:84.23:0,84,1137	1/1:2,25:27:39.30:1179,39,0	1/1:0,17:15:42.14:668,42,0	1/1:0,2:2:6.02:96,6,0
chr10	101168641	.	CA	C	288.44	PASS	AB=0.899;AC=15;AF=0.268;AN=56;BaseQRankSum=7.345;DP=612;FS=1.480;HRun=13;HaplotypeScore=111.5694;InbreedingCoeff=0.3345;MQ=80.07;MQ0=7;MQRankSum=-0.241;QD=1.32;ReadPosRankSum=3.869;VQSLOD=-0.3613;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:17:27.72:0,28,155	0/1:11,1:12:10.06:10,0,184	0/0:52,0:29:30.49:0,30,228	0/0:29,1:15:0.59:0,1,45	0/0:27,0:29:56.99:0,57,576	0/1:19,3:23:12.01:12,0,324	0/0:21,2:23:16.17:0,16,442	0/1:26,2:29:13.55:14,0,376	0/0:19,0:19:35.98:0,36,316	0/1:17,4:21:43.07:43,0,239	0/0:21,0:21:41.56:0,42,339	1/1:12,0:12:16.28:47,16,0	0/0:15,1:16:13.94:0,14,243	0/0:18,0:18:35.94:0,36,313	0/0:22,1:23:23.07:0,23,359	0/1:22,0:22:32.85:99,0,33	0/0:28,0:28:75.07:0,75,706	0/0:19,0:19:44.99:0,45,408	0/1:17,3:19:17.85:18,0,292	0/0:26,1:28:32.19:0,32,408	0/0:12,0:12:27.04:0,27,263	1/1:16,0:16:25.02:71,25,0	1/1:15,0:15:16.14:47,16,0	1/1:22,0:22:22.36:65,22,0	0/0:16,1:18:23.15:0,23,360	0/0:24,1:26:34.99:0,35,460	0/1:21,4:25:40.12:40,0,257	0/0:10,0:9:24.03:0,24,228
chr10	101168652	.	AAAC	A	1771.88	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.022;DP=646;FS=6.628;HRun=0;HaplotypeScore=131.7800;InbreedingCoeff=0.9758;MQ=75.09;MQ0=7;MQRankSum=-3.298;QD=26.06;ReadPosRankSum=2.220;VQSLOD=3.3778;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:33.07:0,33,540	0/0:14,0:14:36.92:0,37,599	0/0:58,0:28:50.12:0,50,749	0/0:42,0:22:29.69:0,30,373	0/0:31,0:31:87.12:0,87,1572	0/0:24,0:23:72.08:0,72,1163	0/0:24,0:24:72.15:0,72,1236	0/0:28,0:28:83.98:0,84,1416	0/0:16,0:16:48.15:0,48,936	0/0:22,0:22:66.18:0,66,1007	0/0:24,0:24:72.09:0,72,1039	1/1:6,8:14:35.39:424,35,0	0/0:17,0:17:51.13:0,51,852	0/0:19,0:19:54.16:0,54,1038	0/0:23,0:23:69.08:0,69,1288	0/0:25,0:25:19.24:0,19,258	0/0:30,0:30:90.26:0,90,1803	0/0:21,0:21:60.15:0,60,1126	0/0:24,0:22:66.09:0,66,1037	0/0:29,0:29:87.05:0,87,1466	0/0:13,0:13:39.10:0,39,729	1/1:9,12:21:52.11:577,52,0	1/1:3,13:16:7.62:382,8,0	1/1:3,14:17:41.93:545,42,0	0/0:22,0:22:66.15:0,66,1082	0/0:26,0:26:77.88:0,78,1370	0/0:21,0:21:63.18:0,63,1110	0/0:11,0:10:27.04:0,27,523
chr10	101168654	.	AC	A	1372.71	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.311;DP=626;FS=7.241;HRun=4;HaplotypeScore=108.8414;InbreedingCoeff=0.9981;MQ=77.47;MQ0=7;MQRankSum=-4.198;QD=15.60;ReadPosRankSum=2.527;VQSLOD=2.6596;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:24.01:0,24,242	0/0:15,0:15:32.19:0,32,328	0/0:61,0:31:45.56:0,46,498	0/0:41,0:22:23.20:0,23,304	0/0:27,0:27:49.82:0,50,744	0/0:22,0:21:48.57:0,49,492	0/0:22,0:22:54.65:0,55,551	0/0:27,0:27:66.06:0,66,698	0/0:18,0:18:51.03:0,51,539	0/0:21,0:21:45.51:0,46,413	0/0:21,0:21:52.25:0,52,465	1/1:14,0:14:38.15:233,38,0	0/0:15,0:15:31.28:0,31,388	0/0:19,0:19:54.02:0,54,563	0/0:23,0:23:67.78:0,68,701	1/1:11,13:24:59.80:588,60,0	0/0:30,0:30:90.20:0,90,1032	0/0:19,0:19:54.09:0,54,608	0/0:24,0:22:51.87:0,52,534	0/0:28,0:28:57.76:0,58,730	0/0:13,0:13:39.05:0,39,421	1/1:20,0:20:52.73:312,53,0	1/1:14,0:14:29.33:173,29,0	1/1:16,0:16:40.85:242,41,0	0/0:22,0:22:53.89:0,54,560	0/0:24,0:24:60.94:0,61,681	0/0:22,0:22:43.30:0,43,516	0/0:10,0:9:24.01:0,24,265
chr10	101168705	.	AAAAAC	A	409.31	PASS	AB=0.964;AC=7;AF=0.125;AN=56;BaseQRankSum=6.773;DP=592;FS=2.092;HRun=0;HaplotypeScore=201.3972;InbreedingCoeff=0.1942;MQ=59.16;MQ0=5;MQRankSum=-6.476;QD=4.26;ReadPosRankSum=-3.534;VQSLOD=1.6358;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,4:18:14.19:313,0,14	0/0:11,0:11:28.48:0,28,197	0/0:23,0:22:53.72:0,54,1141	0/0:27,0:19:35.04:0,35,569	0/0:21,0:21:63.20:0,63,1709	0/0:18,0:17:48.11:0,48,1125	0/0:23,0:23:66.96:0,67,1583	0/0:29,0:28:54.64:0,55,308	0/0:18,0:18:54.17:0,54,1518	0/0:25,0:24:63.20:0,63,1645	0/0:23,0:22:63.22:0,63,1726	0/1:12,0:12:9.01:9,0,47	0/0:25,0:25:75.25:0,75,2076	0/0:16,0:16:42.14:0,42,1192	0/0:26,0:25:67.70:0,68,467	0/0:23,0:23:31.89:0,32,337	0/0:38,0:38:99:0,112,2982	0/0:19,0:19:37.08:0,37,1322	0/1:25,0:23:6.13:6,0,261	0/0:27,0:27:59.36:0,59,500	0/0:11,0:11:3.66:0,4,112	0/1:16,0:16:57.04:57,0,131	0/1:11,0:11:17.42:23,0,17	1/1:14,0:14:20.09:131,20,0	0/0:20,0:20:60.20:0,60,1604	0/0:37,0:35:82.83:0,83,551	0/0:27,0:25:50.68:0,51,352	0/0:9,0:8:15.71:0,16,102
chr10	101168708	.	AAC	A	6815.88	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=12.994;DP=590;FS=2.814;HRun=0;HaplotypeScore=145.5738;InbreedingCoeff=0.9017;MQ=58.77;MQ0=5;MQRankSum=-9.574;QD=23.58;ReadPosRankSum=-1.929;VQSLOD=5.2642;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:23.15:82,0,23	1/1:3,7:10:10.57:296,11,0	0/0:22,0:20:53.63:0,54,740	0/0:29,0:21:46.65:0,47,447	0/0:22,0:22:66.17:0,66,1029	0/0:19,0:18:51.07:0,51,723	0/0:23,0:23:47.28:0,47,920	1/1:8,21:28:49.14:603,49,0	0/0:21,0:21:63.06:0,63,940	0/0:24,0:23:60.15:0,60,967	0/0:23,0:22:62.99:0,63,977	1/1:12,0:12:21.06:283,21,0	0/0:25,0:25:75.04:0,75,1216	0/0:15,0:15:45.14:0,45,734	1/1:11,15:25:50.66:726,51,0	1/1:5,16:21:62.84:810,63,0	0/0:38,0:38:99:0,109,1705	0/0:20,0:20:33.03:0,33,736	1/1:14,13:24:54.68:646,55,0	1/1:10,18:28:34.03:822,34,0	1/1:4,6:10:24.88:288,25,0	1/1:15,0:15:6.95:156,7,0	1/1:12,0:12:22.54:161,23,0	1/1:13,0:13:26.02:206,26,0	0/0:20,0:20:60.20:0,60,973	1/1:17,20:35:61.24:1001,61,0	1/1:12,11:21:30.02:614,30,0	1/1:5,4:8:9.03:123,9,0
chr10	101168709	.	AC	A	3909.04	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=14.913;DP=585;FS=1.857;HRun=1;HaplotypeScore=145.3394;InbreedingCoeff=0.9795;MQ=58.86;MQ0=5;MQRankSum=-9.462;QD=13.67;ReadPosRankSum=-1.793;VQSLOD=2.4262;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:11.04:103,11,0	1/1:10,0:10:10.21:134,10,0	0/0:22,0:20:53.37:0,53,597	0/0:28,0:21:42.93:0,43,376	0/0:22,0:22:66.16:0,66,821	0/0:18,0:17:51.06:0,51,597	0/0:24,0:24:51.43:0,51,745	1/1:28,1:28:48.07:327,48,0	0/0:21,0:21:63.03:0,63,748	0/0:22,0:21:60.16:0,60,770	0/0:23,0:22:57.92:0,58,745	1/1:7,5:12:32.41:191,32,0	0/0:25,0:25:74.82:0,75,946	0/0:15,0:15:45.13:0,45,581	1/1:23,2:24:46.63:371,47,0	1/1:21,1:22:65.17:466,65,0	0/0:38,0:38:99:0,104,1335	0/0:20,0:20:33.59:0,34,574	1/1:26,1:24:52.87:361,53,0	1/1:27,1:28:35.34:350,35,0	1/1:9,1:10:25.30:183,25,0	1/1:9,5:15:32.93:216,33,0	1/1:10,2:12:25.41:162,25,0	1/1:8,4:13:29.22:175,29,0	0/0:20,0:20:60.12:0,60,752	1/1:35,2:35:60.14:518,60,0	1/1:22,1:21:29.53:299,30,0	1/1:6,0:5:8.80:53,9,0
chr10	101168717	.	A	AC	471.40	PASS	AB=0.987;AC=9;AF=0.161;AN=56;BaseQRankSum=6.329;DP=596;FS=5.346;HRun=0;HaplotypeScore=155.4271;InbreedingCoeff=0.0771;MQ=55.84;MQ0=5;MQRankSum=-4.011;QD=2.60;ReadPosRankSum=-3.687;VQSLOD=2.0056;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,8:15:19.57:218,20,0	0/0:10,0:10:21.80:0,22,218	0/0:20,0:18:48.29:0,48,631	0/0:24,0:16:23.03:0,23,344	0/0:25,0:25:72.21:0,72,957	0/0:20,0:19:54.15:0,54,706	0/0:25,1:26:26.04:0,26,879	0/1:29,1:29:99:124,0,460	0/0:21,0:21:60.20:0,60,839	0/0:21,0:20:60.18:0,60,808	0/0:24,0:23:63.16:0,63,844	0/0:16,0:17:37.89:0,38,205	0/0:23,0:23:69.20:0,69,941	0/0:14,0:14:42.13:0,42,569	0/1:25,0:24:23.53:24,0,339	0/0:25,0:25:74.77:0,75,928	0/0:37,0:37:99:0,108,1472	0/0:23,0:23:54.08:0,54,693	0/1:27,0:24:44.30:44,0,408	0/1:27,1:28:99:141,0,317	0/1:12,0:12:9.52:10,0,147	0/0:13,0:15:36.38:0,36,266	0/0:10,0:13:23.41:0,23,118	0/0:11,0:13:16.75:0,17,101	0/0:21,0:21:63.18:0,63,843	0/1:35,1:34:43.96:44,0,527	0/0:20,2:20:29.88:0,30,314	0/1:8,0:7:11.91:12,0,35
chr10	101168732	.	A	AC	3652.57	PASS	AB=0.838;AC=20;AF=0.357;AN=56;BaseQRankSum=11.744;DP=595;FS=10.482;HRun=0;HaplotypeScore=131.0145;InbreedingCoeff=0.3773;MQ=53.48;MQ0=5;MQRankSum=-7.630;QD=13.43;ReadPosRankSum=-0.277;VQSLOD=4.6667;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:17:24.70:132,25,0	0/1:6,2:10:59.76:142,0,60	0/0:17,0:14:42.08:0,42,555	0/0:19,0:12:29.12:0,29,370	0/0:29,0:29:84.25:0,84,1123	0/0:20,0:19:57.19:0,57,796	0/0:27,0:27:71.78:0,72,1005	0/1:21,5:25:1.92:289,0,2	0/0:21,0:21:63.21:0,63,880	0/0:21,0:21:60.20:0,60,826	0/0:20,0:19:57.18:0,57,775	0/1:16,1:16:64.65:65,0,113	0/0:20,0:20:60.18:0,60,805	0/0:14,0:14:39.09:0,39,510	1/1:12,8:25:6.37:451,6,0	0/0:27,0:27:68.90:0,69,822	0/0:44,0:43:89.67:0,90,1640	0/0:24,0:24:69.19:0,69,926	0/1:18,6:24:41.35:304,0,41	1/1:10,11:27:17.94:641,18,0	1/1:5,4:10:20.95:208,21,0	0/1:10,1:11:99:110,0,125	0/1:10,3:13:54.73:55,0,106	0/1:15,1:15:48.21:48,0,118	0/0:20,0:20:60.20:0,60,838	1/1:21,9:36:22.06:736,22,0	0/1:14,4:18:47.49:275,0,47	1/1:11,2:14:6.77:197,7,0
chr10	101168734	.	AAAC	A	2236.84	PASS	AB=0.911;AC=17;AF=0.304;AN=56;BaseQRankSum=4.118;DP=606;FS=0.400;HRun=0;HaplotypeScore=156.8337;InbreedingCoeff=0.0881;MQ=52.58;MQ0=4;MQRankSum=-2.319;QD=8.25;ReadPosRankSum=-3.441;VQSLOD=2.7493;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:44.69:158,0,45	0/0:10,0:10:11.73:0,12,99	0/0:17,0:14:35.97:0,36,644	0/0:18,0:11:25.49:0,25,373	0/0:29,0:29:84.04:0,84,1547	0/0:19,0:19:57.20:0,57,1174	0/0:27,0:27:71.83:0,72,1428	0/1:22,4:25:78.43:527,0,78	0/0:22,0:22:66.20:0,66,1320	0/0:24,0:24:69.20:0,69,1274	0/0:20,0:19:57.05:0,57,984	1/1:17,0:16:1.95:71,2,0	0/0:19,0:19:54.12:0,54,1072	0/0:14,0:14:42.11:0,42,777	0/1:23,2:24:99:110,0,125	0/0:26,0:26:3.30:0,3,10	0/0:44,0:43:99:0,120,2335	0/0:24,0:24:66.16:0,66,1207	0/1:26,2:26:99:302,0,173	0/1:27,0:27:99:293,0,169	1/1:11,0:11:0.69:82,1,0	0/1:11,0:11:16.71:19,0,17	1/1:13,0:13:11.87:84,12,0	1/1:17,0:16:3.71:57,4,0	0/0:22,0:22:66.20:0,66,1256	0/1:39,2:39:99:397,0,145	0/1:19,3:20:99:152,0,134	0/1:7,9:15:20.32:147,0,20
chr10	101168736	.	AC	A	2014.13	PASS	AB=0.992;AC=17;AF=0.304;AN=56;BaseQRankSum=12.320;DP=606;FS=4.708;HRun=1;HaplotypeScore=135.3903;InbreedingCoeff=0.1345;MQ=54.65;MQ0=4;MQRankSum=-7.719;QD=7.22;ReadPosRankSum=1.014;VQSLOD=0.9348;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,12:17:35.21:388,35,0	0/1:11,0:11:45.10:63,0,45	0/0:18,0:15:34.99:0,35,449	0/0:17,0:11:24.06:0,24,225	0/0:29,0:29:83.98:0,84,983	0/0:19,0:19:57.19:0,57,737	0/0:28,0:28:73.57:0,74,935	0/1:26,0:25:50.20:257,0,50	0/0:22,0:22:66.19:0,66,836	0/0:25,0:25:72.19:0,72,863	0/0:21,0:20:60.01:0,60,678	0/1:16,1:16:6.17:41,0,6	0/0:18,0:18:54.12:0,54,678	0/0:15,0:15:26.84:0,27,480	0/1:24,0:23:40.63:148,0,41	0/0:26,0:26:9.33:0,9,35	0/0:44,0:43:99:0,119,1505	0/0:23,0:23:66.09:0,66,785	0/1:26,1:26:96.76:193,0,97	0/1:28,0:28:68.93:248,0,69	1/1:9,0:9:14.25:106,14,0	0/1:11,0:11:9.87:10,0,31	0/1:14,0:14:2.97:36,0,3	0/1:16,0:15:4.65:31,0,5	0/0:22,0:22:66.18:0,66,825	0/1:41,0:39:73.99:348,0,74	0/1:23,0:21:22.71:230,0,23	1/1:15,0:14:6.59:91,7,0
chr10	101168737	.	CAA	C	2386.18	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=8.144;DP=603;FS=2.347;HRun=7;HaplotypeScore=144.1904;InbreedingCoeff=0.5064;MQ=54.66;MQ0=4;MQRankSum=-6.934;QD=11.75;ReadPosRankSum=-2.713;VQSLOD=-0.2412;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:17:9.04:9,0,110	0/1:11,0:11:7.63:8,0,108	0/0:19,0:16:22.19:0,22,623	0/0:15,1:10:21.03:0,21,341	0/0:29,0:29:78.25:0,78,1353	0/0:19,0:19:57.20:0,57,1026	0/0:28,0:28:76.20:0,76,1330	0/1:25,0:24:23.19:23,0,53	0/0:22,0:22:66.23:0,66,1178	0/0:25,0:25:69.24:0,69,1229	0/0:20,0:19:51.16:0,51,851	1/1:5,12:16:37.30:466,37,0	0/0:18,0:18:51.17:0,51,911	0/0:15,0:15:45.15:0,45,777	0/0:24,0:23:0.50:0,0,163	1/1:0,26:26:63.08:838,63,0	0/0:43,0:42:98.33:0,98,1976	0/0:23,0:23:57.17:0,57,993	0/0:27,0:26:16.14:0,16,248	0/1:25,0:26:0.52:1,0,262	0/0:10,0:10:5.06:0,5,80	1/1:5,6:11:13.34:261,13,0	1/1:5,9:14:36.11:457,36,0	1/1:4,12:15:29.50:370,30,0	0/0:22,0:22:66.23:0,66,1168	0/1:40,0:38:99:132,0,206	0/0:22,0:22:31.38:0,31,262	0/0:15,0:14:0.76:0,1,63
chr10	101168742	.	AAC	A	1443.55	PASS	AB=0.891;AC=14;AF=0.250;AN=56;BaseQRankSum=9.459;DP=589;FS=5.277;HRun=0;HaplotypeScore=139.5896;InbreedingCoeff=0.5290;MQ=55.38;MQ0=3;MQRankSum=-8.762;QD=8.02;ReadPosRankSum=-1.701;VQSLOD=3.0747;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:37.07:0,37,237	0/1:7,2:9:57.39:57,0,137	0/0:16,0:15:39.11:0,39,612	0/0:15,0:9:21.02:0,21,325	0/0:26,0:26:75.22:0,75,1215	0/0:21,0:21:63.19:0,63,1028	0/0:28,0:28:80.94:0,81,1250	0/0:23,0:22:22.52:0,23,354	0/0:23,0:23:69.21:0,69,1116	0/0:29,0:29:81.24:0,81,1291	0/0:18,0:17:45.13:0,45,759	1/1:15,0:14:38.39:263,38,0	0/0:17,0:17:51.15:0,51,832	0/0:16,0:16:48.14:0,48,752	0/1:20,1:20:63.76:64,0,191	1/1:29,0:29:5.36:361,5,0	0/0:42,0:41:99:0,117,1838	0/0:22,0:22:57.18:0,57,929	0/0:26,1:26:16.33:0,16,423	0/1:25,1:26:47.41:47,0,404	0/0:10,0:10:20.07:0,20,164	1/1:9,0:9:3.03:104,3,0	1/1:14,1:15:13.45:239,13,0	1/1:17,0:16:8.37:173,8,0	0/0:23,0:23:69.19:0,69,1079	0/1:31,8:38:99:306,0,496	0/0:23,0:21:36.40:0,36,443	0/0:14,0:14:20.71:0,21,149
chr10	101168942	.	TA	T	1901.65	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.766;DP=590;FS=0.000;HRun=4;HaplotypeScore=122.0053;InbreedingCoeff=0.9969;MQ=78.11;MQ0=0;MQRankSum=-4.905;QD=25.36;ReadPosRankSum=0.178;VQSLOD=2.1294;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.26:0,78,1092	0/0:11,0:11:28.91:0,29,382	0/0:32,0:29:69.07:0,69,952	0/0:31,0:30:83.12:0,83,1068	0/0:25,0:25:72.24:0,72,1008	0/0:31,0:31:84.27:0,84,1155	0/0:26,0:26:75.04:0,75,1022	0/0:30,0:30:81.27:0,81,1126	0/0:23,0:23:69.21:0,69,946	0/0:24,0:24:69.22:0,69,951	0/0:21,0:21:63.17:0,63,857	1/1:3,20:21:57.17:677,57,0	0/0:14,0:14:42.14:0,42,588	0/0:21,0:21:60.19:0,60,825	0/0:24,0:24:66.20:0,66,887	0/0:19,0:19:57.19:0,57,797	0/0:28,0:28:84.13:0,84,1129	0/0:15,0:15:45.06:0,45,586	0/0:9,0:9:27.09:0,27,378	0/0:23,0:23:53.95:0,54,691	0/0:13,0:12:27.09:0,27,377	1/1:1,15:16:39.12:467,39,0	1/1:2,18:20:42.13:504,42,0	1/1:3,13:16:36.09:414,36,0	0/0:15,0:15:42.13:0,42,572	0/0:21,0:21:63.21:0,63,881	0/0:23,0:21:54.18:0,54,749	0/0:7,0:6:18.06:0,18,252
chr10	101168967	.	CCA	C	5252.84	PASS	AB=0.625;AC=17;AF=0.304;AN=56;BaseQRankSum=7.742;DP=588;FS=5.566;HRun=0;HaplotypeScore=144.2772;InbreedingCoeff=0.9143;MQ=60.14;MQ0=2;MQRankSum=-8.460;QD=35.73;ReadPosRankSum=-1.431;VQSLOD=6.1862;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:30.10:0,30,430	1/1:1,8:9:26.30:387,26,0	0/0:43,0:32:90.25:0,90,1497	0/0:36,0:31:65.06:0,65,1318	0/0:23,0:23:66.20:0,66,1229	0/0:30,0:30:90.31:0,90,1744	0/0:31,0:31:93.31:0,93,1732	1/1:20,15:35:96.13:1344,96,0	0/0:23,0:23:69.22:0,69,1303	0/0:30,0:30:90.29:0,90,1702	0/0:26,0:26:75.26:0,75,1443	0/0:20,0:18:40.34:0,40,304	0/0:20,0:20:60.20:0,60,1059	0/0:19,0:19:57.19:0,57,1067	1/1:3,10:13:38.48:519,38,0	0/0:18,0:18:36.48:0,36,157	0/0:20,0:19:57.13:0,57,1094	0/0:15,0:15:41.97:0,42,732	1/1:8,3:11:25.45:223,25,0	1/1:4,16:20:59.55:867,60,0	1/1:9,6:14:31.19:395,31,0	0/0:13,0:13:38.79:0,39,314	0/0:15,0:15:41.75:0,42,389	0/0:15,0:15:26.53:0,27,207	0/0:14,0:14:42.14:0,42,812	0/1:6,9:15:17.74:515,0,18	1/1:6,16:20:57.45:793,57,0	1/1:2,5:6:16.78:210,17,0
chr10	101168969	.	A	AC	1299.74	PASS	AB=0.915;AC=9;AF=0.161;AN=56;BaseQRankSum=9.622;DP=596;FS=5.563;HRun=2;HaplotypeScore=151.3794;InbreedingCoeff=0.1211;MQ=59.98;MQ0=2;MQRankSum=-7.932;QD=9.09;ReadPosRankSum=1.680;VQSLOD=1.4419;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.21:0,75,916	0/1:11,0:11:58.35:89,0,58	0/0:42,0:31:87.12:0,87,1147	0/0:37,0:31:66.97:0,67,1001	0/0:22,0:22:60.20:0,60,836	0/0:31,0:31:78.94:0,79,1241	0/0:31,0:31:93.29:0,93,1267	0/1:33,6:39:99:438,0,189	0/0:22,0:22:66.20:0,66,904	0/0:29,0:29:87.29:0,87,1214	0/0:26,0:26:75.24:0,75,1032	0/0:19,0:17:45.10:0,45,530	0/0:21,0:21:63.19:0,63,846	0/0:21,0:21:60.17:0,60,784	1/1:12,1:13:11.70:239,12,0	0/0:20,0:20:57.03:0,57,643	0/0:20,0:19:57.19:0,57,788	0/0:15,0:15:45.10:0,45,595	0/0:12,0:12:1.41:0,1,216	0/1:18,2:20:1.75:225,0,2	0/1:13,3:15:81.93:122,0,82	0/0:13,0:13:38.98:0,39,453	0/0:15,0:15:42.13:0,42,518	0/0:15,0:15:29.76:0,30,313	0/0:14,0:14:42.14:0,42,587	0/1:14,1:15:97.61:98,0,121	0/1:18,4:20:69.98:210,0,70	0/1:7,0:6:23.67:24,0,44
chr10	101168975	.	CAACAA	C	2798.96	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=9.700;DP=605;FS=0.000;HRun=0;HaplotypeScore=190.7953;InbreedingCoeff=0.0746;MQ=60.50;MQ0=2;MQRankSum=-11.479;QD=13.59;ReadPosRankSum=0.311;VQSLOD=3.1062;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:30.53:0,31,323	0/1:11,0:11:40.39:145,0,40	0/0:42,0:32:78.25:0,78,2058	0/0:36,0:31:73.09:0,73,1610	0/0:22,0:22:63.22:0,63,1824	0/0:33,0:33:97.18:0,97,2686	0/0:31,0:31:87.27:0,87,2429	0/1:34,0:34:99:352,0,183	0/0:22,0:22:60.21:0,60,1606	0/0:29,0:29:84.29:0,84,2509	0/0:27,0:27:78.20:0,78,2132	0/0:16,0:14:25.08:0,25,171	0/0:20,0:20:60.21:0,60,1841	0/0:23,0:23:66.19:0,66,1667	0/1:15,0:15:3.30:227,0,3	1/1:8,14:22:51.17:1000,51,0	0/0:21,0:20:54.17:0,54,1520	0/0:15,0:16:39.08:0,39,953	0/1:14,0:13:42.02:42,0,123	1/1:20,0:20:31.10:405,31,0	0/1:15,0:14:30.19:30,0,73	0/1:12,0:12:89.95:119,0,90	0/1:15,0:15:71.86:72,0,82	0/0:14,0:14:1.31:0,1,53	0/0:17,0:17:51.17:0,51,1447	0/1:15,0:15:99:196,0,124	0/1:25,0:23:13.78:302,0,14	0/1:8,0:7:50.16:75,0,50
chr10	101168978	.	CAA	C	7080.36	PASS	AB=0.609;AC=29;AF=0.518;AN=56;BaseQRankSum=18.443;DP=595;FS=0.326;HRun=4;HaplotypeScore=140.3167;InbreedingCoeff=0.9174;MQ=62.81;MQ0=2;MQRankSum=-13.182;QD=27.77;ReadPosRankSum=0.974;VQSLOD=3.4750;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:75.17:1074,75,0	1/1:3,7:10:24.81:305,25,0	0/0:40,0:31:84.24:0,84,1392	0/0:35,0:30:54.43:0,54,1145	0/0:23,0:23:66.23:0,66,1185	0/0:33,0:33:86.79:0,87,1693	0/0:29,0:29:87.27:0,87,1549	1/1:22,10:32:73.93:819,74,0	0/0:21,0:21:60.20:0,60,1051	0/0:29,0:29:84.29:0,84,1545	0/0:27,0:27:81.20:0,81,1374	1/1:0,16:14:36.12:527,36,0	0/0:23,0:23:69.21:0,69,1216	0/0:22,0:22:66.19:0,66,1087	1/1:6,9:15:42.19:469,42,0	1/1:21,0:21:50.30:353,50,0	0/0:23,0:22:60.17:0,60,1018	0/0:15,0:15:42.10:0,42,674	1/1:11,3:13:19.09:180,19,0	1/1:3,16:19:55.30:718,55,0	1/1:9,5:13:20.81:214,21,0	1/1:4,8:12:33.10:460,33,0	1/1:3,11:14:30.01:407,30,0	1/1:4,9:13:8.69:264,9,0	0/0:18,0:18:54.18:0,54,952	0/1:5,9:14:19.36:409,0,19	1/1:9,14:22:53.65:694,54,0	1/1:3,5:7:16.57:188,17,0
chr10	101168980	.	A	AC	6296.54	PASS	AB=0.846;AC=29;AF=0.518;AN=56;BaseQRankSum=17.517;DP=592;FS=1.110;HRun=0;HaplotypeScore=132.3567;InbreedingCoeff=0.9031;MQ=63.36;MQ0=2;MQRankSum=-12.841;QD=24.69;ReadPosRankSum=0.400;VQSLOD=5.1679;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:30.34:151,30,0	1/1:7,3:10:30.10:414,30,0	0/0:38,0:29:84.22:0,84,1108	0/0:36,0:31:56.98:0,57,961	0/0:23,0:23:66.22:0,66,913	0/0:32,1:33:51.72:0,52,1273	0/0:29,0:29:87.26:0,87,1193	1/1:16,19:35:99:1405,99,0	0/0:20,0:20:60.20:0,60,837	0/0:29,0:29:87.28:0,87,1199	0/0:27,0:27:81.19:0,81,1061	1/1:17,0:15:12.07:71,12,0	0/0:23,0:23:69.21:0,69,932	0/0:22,0:22:66.18:0,66,873	1/1:9,5:14:42.02:518,42,0	1/1:16,4:20:14.93:219,15,0	0/0:23,0:22:61.73:0,62,809	0/0:16,0:16:42.10:0,42,549	1/1:4,11:14:36.08:507,36,0	1/1:17,4:21:57.07:705,57,0	1/1:5,8:12:27.56:396,28,0	1/1:10,1:11:17.07:167,17,0	1/1:12,0:12:13.99:114,14,0	0/1:9,2:11:3.90:81,0,4	0/0:18,0:18:54.17:0,54,738	1/1:10,4:14:0.17:464,0,0	1/1:14,8:21:60.18:786,60,0	1/1:7,3:9:23.97:298,24,0
chr10	101169099	.	G	GTC	690.05	PASS	AB=0.857;AC=6;AF=0.107;AN=56;BaseQRankSum=6.011;DP=702;FS=18.452;HRun=0;HaplotypeScore=170.0503;InbreedingCoeff=-0.1229;MQ=60.86;MQ0=13;MQRankSum=-7.072;QD=3.61;ReadPosRankSum=-3.724;VQSLOD=0.9495;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:27:22.36:0,22,281	0/1:4,2:6:36.48:44,0,36	0/0:34,0:22:37.76:0,38,549	0/0:54,0:26:44.29:0,44,605	0/0:14,0:13:39.12:0,39,538	0/0:24,0:24:72.24:0,72,1028	0/0:24,0:24:69.19:0,69,946	0/1:76,0:73:99:218,0,1764	0/0:20,0:20:57.19:0,57,813	0/0:29,0:28:84.27:0,84,1171	0/0:24,0:24:66.16:0,66,896	0/0:18,0:18:39.12:0,39,538	0/0:16,0:16:45.11:0,45,602	0/0:15,0:15:36.12:0,36,512	0/0:22,2:24:27.09:0,27,387	0/0:21,0:21:55.98:0,56,757	0/0:20,0:20:51.17:0,51,730	0/0:23,0:23:61.96:0,62,833	0/1:30,3:30:61.29:61,0,712	0/0:18,2:19:8.61:0,9,209	0/1:25,4:28:18.63:19,0,289	0/0:14,0:14:18.04:0,18,239	0/0:15,0:15:36.12:0,36,509	0/0:33,0:33:66.17:0,66,939	0/0:17,0:17:48.16:0,48,687	0/1:18,7:25:99:286,0,613	0/0:24,1:24:57.61:0,58,766	0/1:17,5:22:99:186,0,456
chr10	101169117	.	CTCTG	C	3207.07	PASS	AB=0.947;AC=18;AF=0.321;AN=56;BaseQRankSum=4.452;DP=736;FS=2.799;HRun=0;HaplotypeScore=181.9935;InbreedingCoeff=-0.1719;MQ=57.78;MQ0=28;MQRankSum=-2.325;QD=6.96;ReadPosRankSum=0.884;VQSLOD=2.8256;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:99:255,0,125	1/1:8,2:10:11.77:150,12,0	0/0:40,0:17:15.37:0,15,416	0/1:72,0:24:22.16:22,0,208	0/0:18,0:17:51.10:0,51,848	0/0:29,0:29:79.01:0,79,1738	0/0:22,0:22:63.16:0,63,1354	0/1:74,0:70:99:378,0,1079	0/0:16,0:16:48.07:0,48,942	0/0:32,0:31:90.27:0,90,1908	0/0:24,0:24:72.14:0,72,1482	0/1:12,0:12:28:119,0,28	0/0:13,0:13:36.11:0,36,844	0/0:15,0:15:42.10:0,42,821	0/1:22,2:23:55.79:56,0,182	0/1:16,0:16:84.17:250,0,84	0/0:19,0:19:45.12:0,45,994	0/0:24,0:24:70.36:0,70,1524	0/1:37,4:32:99:261,0,407	0/1:18,1:18:99:223,0,105	0/1:22,2:24:57.29:71,0,57	0/1:18,0:18:18.97:71,0,19	1/1:14,0:14:6.05:244,6,0	0/1:34,0:34:14.39:428,0,14	0/0:22,0:22:66.17:0,66,1308	0/1:18,7:25:99:506,0,381	0/1:23,1:22:30.46:30,0,536	0/1:18,5:23:99:311,0,231
chr10	101169121	.	G	GTC	3896.62	PASS	AB=0.943;AC=22;AF=0.393;AN=56;BaseQRankSum=-0.670;DP=726;FS=3.758;HRun=0;HaplotypeScore=162.1773;InbreedingCoeff=0.3807;MQ=58.58;MQ0=27;MQRankSum=-5.175;QD=8.66;ReadPosRankSum=-5.969;VQSLOD=2.1957;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,20:32:33.11:526,33,0	1/1:4,5:9:12.04:194,12,0	0/1:42,0:19:24.98:25,0,206	0/1:67,0:21:8.13:8,0,132	0/0:18,0:17:39.11:0,39,466	0/0:28,0:28:72.19:0,72,868	0/0:22,0:22:35.67:0,36,494	1/1:51,18:66:41.51:918,42,0	0/0:15,0:16:38.95:0,39,456	0/0:30,0:29:75.12:0,75,902	0/0:24,0:24:60.19:0,60,738	0/1:2,0:13:20.85:21,0,30	0/0:12,0:12:33.10:0,33,406	0/0:15,0:15:36.11:0,36,437	0/1:17,6:22:9.11:71,0,9	0/1:4,0:15:2.37:2,0,74	0/0:17,0:17:36.10:0,36,428	0/0:25,0:25:54.17:0,54,663	1/1:35,6:32:40.92:553,41,0	1/1:11,6:16:19.14:346,19,0	1/1:15,8:24:6.02:98,6,0	0/1:0,0:18:19.09:23,0,19	0/0:2,0:14:25.52:0,26,125	0/0:7,0:34:18.01:0,18,191	0/0:21,0:21:48.15:0,48,590	0/1:20,5:25:29.34:617,0,29	0/1:27,1:27:33.87:135,0,34	1/1:18,5:23:0.68:360,1,0
chr10	101169136	.	TTC	T	956.57	PASS	AB=0.789;AC=7;AF=0.125;AN=56;BaseQRankSum=7.160;DP=704;FS=22.997;HRun=0;HaplotypeScore=159.3981;InbreedingCoeff=-0.1415;MQ=66.59;MQ0=23;MQRankSum=-7.823;QD=5.34;ReadPosRankSum=1.317;VQSLOD=1.8207;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:54.82:0,55,803	0/0:9,1:10:17.95:0,18,209	0/0:59,0:31:73.46:0,73,953	0/0:87,0:30:52.02:0,52,635	0/0:16,0:16:45.15:0,45,858	0/0:30,0:30:87.26:0,87,1597	0/0:19,0:19:50.94:0,51,973	0/1:30,7:37:99:195,0,1034	0/0:25,0:25:75.09:0,75,1298	0/0:29,0:29:87.29:0,87,1644	0/0:20,0:20:60.21:0,60,1189	0/0:12,0:12:17.98:0,18,184	0/0:15,0:15:45.15:0,45,851	0/0:13,0:13:39.13:0,39,781	0/1:14,6:19:9.82:10,0,461	0/0:13,0:13:35.61:0,36,348	0/0:16,0:15:42.13:0,42,749	0/0:23,0:23:69.24:0,69,1297	0/1:27,6:26:99:170,0,597	0/1:16,5:20:42.56:43,0,573	0/0:16,2:18:24.07:0,24,316	0/0:19,0:19:42.10:0,42,485	0/0:15,0:15:35.96:0,36,385	0/0:34,0:34:61.59:0,62,635	0/0:22,0:22:66.18:0,66,1206	0/1:20,6:26:99:227,0,593	0/1:14,8:20:99:168,0,484	0/1:12,8:20:99:274,0,264
chr10	101169301	.	TGTTCCTCCCA	T	3195.95	PASS	AC=18;AF=0.333;AN=54;BaseQRankSum=6.740;DP=407;FS=2.177;HRun=0;HaplotypeScore=129.5197;InbreedingCoeff=0.8703;MQ=66.41;MQ0=2;MQRankSum=-6.430;QD=31.03;ReadPosRankSum=0.921;VQSLOD=3.4655;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:57.20:0,57,2731	1/1:1,3:4:6.02:180,6,0	0/0:27,0:22:12.04:0,12,416	0/0:33,0:23:24.37:0,24,778	0/0:7,0:7:18.06:0,18,880	0/0:13,0:13:24.08:0,24,1155	0/0:27,0:27:51.16:0,51,2058	1/1:10,5:15:15.05:330,15,0	0/0:22,0:22:51.16:0,51,2294	0/0:18,0:18:24.08:0,24,1160	0/0:11,0:11:21.07:0,21,1010	0/0:12,0:12:31.33:0,31,914	0/0:19,0:19:48.16:0,48,2239	0/0:17,0:17:39.13:0,39,1831	1/1:4,15:19:39.13:1171,39,0	1/1:14,0:14:26.21:763,26,0	0/0:24,0:24:60.21:0,60,2996	0/0:13,0:13:27.09:0,27,1234	1/1:10,6:15:15.05:309,15,0	1/1:7,5:12:3.01:60,3,0	1/1:5,6:11:3.01:90,3,0	0/0:4,0:4:6.02:0,6,239	0/0:11,0:11:21.07:0,21,612	0/0:11,0:11:22.32:0,22,525	0/0:6,0:6:12.04:0,12,507	1/1:4,4:8:9.03:243,9,0	1/1:2,2:4:9.03:241,9,0	./.
chr10	101169327	.	TCCCAG	T	653.07	PASS	AB=0.952;AC=8;AF=0.143;AN=56;BaseQRankSum=8.974;DP=451;FS=5.282;HRun=0;HaplotypeScore=120.1221;InbreedingCoeff=-0.1659;MQ=72.45;MQ0=3;MQRankSum=-7.284;QD=7.77;ReadPosRankSum=5.425;VQSLOD=1.5114;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,2903	0/1:6,0:6:37.88:38,0,265	0/0:27,0:21:54.17:0,54,1329	0/0:38,0:27:61.45:0,61,1586	0/0:10,0:10:30.10:0,30,922	0/0:13,0:13:39.13:0,39,1171	0/0:27,0:27:81.23:0,81,2244	0/1:11,0:11:8.18:8,0,389	0/0:22,0:22:66.21:0,66,2042	0/0:19,0:19:57.19:0,57,1616	0/0:15,0:15:45.15:0,45,1326	0/0:16,0:16:48.16:0,48,1235	0/0:26,0:26:78.27:0,78,2381	0/0:14,0:14:42.14:0,42,1389	0/1:20,0:20:99:317,0,174	0/1:5,8:13:56.56:302,0,57	0/0:29,0:29:84.29:0,84,2579	0/0:14,0:14:39.13:0,39,1192	0/1:8,0:7:15.07:15,0,165	0/0:13,0:13:30.99:0,31,693	0/1:10,0:10:15.93:16,0,198	0/0:4,0:4:9.03:0,9,248	0/0:15,0:15:45.15:0,45,1169	0/0:16,0:16:36.10:0,36,823	0/0:8,0:8:24.08:0,24,718	0/1:6,0:6:41.25:41,0,195	0/1:9,0:10:49.56:50,0,345	0/0:8,0:8:14.18:0,14,438
chr10	101169333	.	TTCCTC	T	555.10	PASS	AB=0.952;AC=8;AF=0.143;AN=56;BaseQRankSum=8.568;DP=456;FS=7.075;HRun=0;HaplotypeScore=123.6515;InbreedingCoeff=-0.1532;MQ=73.94;MQ0=2;MQRankSum=-7.830;QD=6.24;ReadPosRankSum=4.993;VQSLOD=1.4543;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,3030	0/1:6,0:6:32.02:32,0,267	0/0:23,0:20:54.17:0,54,1277	0/0:34,0:24:63.66:0,64,1487	0/0:12,0:12:36.12:0,36,1079	0/0:13,0:13:39.13:0,39,1189	0/0:23,0:23:69.20:0,69,1871	0/1:11,0:11:2.98:3,0,452	0/0:20,0:20:57.20:0,57,1850	0/0:24,0:24:72.25:0,72,2026	0/0:15,0:15:45.15:0,45,1324	0/0:16,0:16:48.16:0,48,902	0/0:25,0:25:75.26:0,75,2376	0/0:15,0:15:45.15:0,45,1420	0/1:21,0:21:99:274,0,257	0/1:5,8:13:99:295,0,112	0/0:28,0:28:84.29:0,84,2632	0/0:13,0:13:39.11:0,39,1129	0/1:9,0:8:6.06:6,0,254	0/0:14,0:14:31.92:0,32,759	0/1:10,0:10:9.95:10,0,281	0/0:5,0:5:12.04:0,12,242	0/0:15,0:15:39.12:0,39,791	0/0:17,0:17:47.97:0,48,728	0/0:10,0:10:30.09:0,30,804	0/1:6,0:6:33.82:34,0,205	0/1:13,0:13:28.26:28,0,584	0/0:10,0:10:22.37:0,22,599
chr10	101169337	.	TC	T	755.74	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=10.028;DP=458;FS=17.329;HRun=4;HaplotypeScore=89.9835;InbreedingCoeff=0.8361;MQ=78.85;MQ0=2;MQRankSum=-4.385;QD=11.63;ReadPosRankSum=1.206;VQSLOD=1.0759;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1427	0/0:7,0:7:17.54:0,18,204	0/0:25,0:23:63.62:0,64,807	0/0:28,0:22:53.40:0,53,718	0/0:14,0:14:42.13:0,42,571	0/0:13,0:13:39.12:0,39,529	0/0:20,0:20:57.19:0,57,798	0/0:12,0:12:28.32:0,28,349	0/0:20,0:20:60.18:0,60,807	0/0:26,0:26:75.24:0,75,1017	0/0:16,0:16:45.14:0,45,615	1/1:15,2:17:43.97:297,44,0	0/0:25,0:25:75.25:0,75,1049	0/0:14,0:14:42.13:0,42,573	0/0:21,0:21:28.24:0,28,206	0/1:12,0:12:53.08:65,0,53	0/0:29,0:29:87.29:0,87,1216	0/0:12,0:12:36.12:0,36,504	0/0:9,0:8:22.31:0,22,268	0/0:14,0:14:33.11:0,33,451	0/0:10,0:10:13.29:0,13,171	1/1:5,0:5:8.37:51,8,0	1/1:15,0:15:35.69:191,36,0	1/1:13,3:16:42.59:312,43,0	0/0:11,0:11:30.10:0,30,420	0/0:6,0:6:14.53:0,15,162	0/0:13,0:13:35.60:0,36,463	0/0:11,0:11:30.09:0,30,402
chr10	101169339	.	C	CCAGTTCCTT	3216.93	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.377;DP=460;FS=11.486;HRun=0;HaplotypeScore=155.5167;InbreedingCoeff=0.9849;MQ=79.61;MQ0=2;MQRankSum=-2.390;QD=59.57;ReadPosRankSum=0.091;VQSLOD=2.6970;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,2790	0/0:7,0:7:21.07:0,21,432	0/0:25,0:24:63.70:0,64,1355	0/0:29,0:21:50.15:0,50,1148	0/0:14,0:14:42.14:0,42,1054	0/0:13,0:13:39.12:0,39,1016	0/0:19,0:19:57.20:0,57,1560	0/0:12,0:12:30.10:0,30,643	0/0:20,0:20:60.19:0,60,1641	0/0:25,0:25:75.25:0,75,1765	0/0:15,0:15:45.15:0,45,1130	1/1:15,2:17:51.17:1062,51,0	0/0:25,0:25:75.26:0,75,2014	0/0:14,0:14:42.14:0,42,1151	0/0:21,0:21:51.17:0,51,1188	0/0:12,0:12:35.86:0,36,640	0/0:31,0:31:90.30:0,90,2461	0/0:13,0:13:36.12:0,36,1028	0/0:10,0:9:27.07:0,27,520	0/0:15,0:15:33.11:0,33,676	0/0:10,0:10:18:0,18,290	1/1:2,2:6:12.04:387,12,0	1/1:10,5:15:42.13:1061,42,0	1/1:13,3:16:45.15:864,45,0	0/0:11,0:11:33.10:0,33,783	0/0:6,0:6:18.06:0,18,396	0/0:13,0:13:39.13:0,39,885	0/0:11,0:11:30.10:0,30,635
chr10	101169341	.	CA	C	1468.96	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.900;DP=465;FS=11.865;HRun=1;HaplotypeScore=90.1516;InbreedingCoeff=0.9840;MQ=80.32;MQ0=2;MQRankSum=-2.447;QD=28.25;ReadPosRankSum=0.254;VQSLOD=2.1995;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1593	0/0:7,0:7:20.99:0,21,254	0/0:24,0:23:62.01:0,62,864	0/0:27,0:21:51.87:0,52,725	0/0:14,0:14:42.14:0,42,654	0/0:12,0:12:36.12:0,36,563	0/0:19,0:19:57.19:0,57,890	0/0:13,0:13:33.05:0,33,463	0/0:20,0:20:57.19:0,57,878	0/0:25,0:25:75.25:0,75,1151	0/0:15,0:15:45.15:0,45,698	1/1:4,12:16:46.71:547,47,0	0/0:25,0:25:75.25:0,75,1154	0/0:14,0:14:39.13:0,39,607	0/0:22,0:22:53.73:0,54,467	0/0:12,0:12:28.80:0,29,220	0/0:32,0:32:93.26:0,93,1383	0/0:15,0:15:45.07:0,45,629	0/0:10,0:9:27.06:0,27,373	0/0:15,0:15:36.11:0,36,521	0/0:10,0:10:17.92:0,18,223	1/1:4,1:5:11.11:101,11,0	1/1:5,10:15:40.37:458,40,0	1/1:6,10:16:44.19:520,44,0	0/0:13,0:13:39.09:0,39,536	0/0:8,0:8:20.98:0,21,251	0/0:14,0:14:42.06:0,42,582	0/0:11,0:11:30.10:0,30,454
chr10	101169768	.	AGT	A	1949.37	PASS	AB=0.875;AC=26;AF=0.464;AN=56;BaseQRankSum=5.471;DP=700;FS=0.492;HRun=0;HaplotypeScore=106.6603;InbreedingCoeff=0.3595;MQ=70.07;MQ0=9;MQRankSum=-0.343;QD=4.91;ReadPosRankSum=0.631;VQSLOD=2.9893;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:35:0.66:0,1,20	1/1:4,3:7:3.01:33,3,0	0/0:27,0:23:6.90:0,7,70	0/0:22,0:19:0:0,0,0	0/0:26,1:27:14.87:0,15,611	0/0:26,0:26:42.08:0,42,555	0/1:18,1:19:0.35:0,0,389	1/1:29,5:33:17.82:170,18,0	0/1:22,6:28:99:103,0,225	0/1:26,1:26:0.21:0,0,355	0/1:15,3:18:12.22:12,0,228	0/0:6,0:13:5.80:0,6,52	0/1:26,1:29:41.05:41,0,195	0/1:16,2:18:3.19:3,0,348	1/1:14,11:27:17.84:167,18,0	1/1:9,14:24:35.88:366,36,0	0/0:17,2:18:5.85:0,6,480	0/0:32,0:32:47.94:0,48,603	1/1:18,3:22:14.67:128,15,0	0/1:14,10:23:15.07:270,0,15	1/1:14,9:25:23.73:228,24,0	0/0:26,0:36:27.88:0,28,187	0/0:12,0:21:4.94:0,5,35	0/0:20,1:38:5.45:0,5,346	0/1:22,3:25:33.44:33,0,369	1/1:15,8:23:18.03:189,18,0	1/1:17,9:28:26.57:241,27,0	1/1:11,7:18:14.71:144,15,0
chr10	101170112	.	TAAGTG	T	13331.94	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=19.226;DP=720;FS=12.372;HRun=0;HaplotypeScore=190.9841;InbreedingCoeff=0.9909;MQ=85.12;MQ0=0;MQRankSum=-17.590;QD=36.43;ReadPosRankSum=1.627;VQSLOD=3.6862;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,37:43:61.47:1176,61,0	1/1:4,6:9:18.06:357,18,0	0/0:29,0:29:66.20:0,66,1864	0/0:28,0:28:68.88:0,69,1895	0/0:28,0:28:75.26:0,75,2232	0/0:15,0:14:42.14:0,42,1254	0/0:26,0:26:63.22:0,63,1882	1/1:11,21:32:63.15:1045,63,0	0/0:23,0:23:66.23:0,66,1942	0/0:35,0:35:94.56:0,95,2662	0/0:20,0:20:57.20:0,57,1691	1/1:4,20:24:60.21:1171,60,0	0/0:27,0:27:76.77:0,77,2319	0/0:35,0:35:99:0,99,2942	1/1:3,30:33:66.14:1191,66,0	1/1:2,18:20:51.18:1012,51,0	0/0:42,0:42:99:0,117,3287	0/0:28,0:28:78.25:0,78,2234	1/1:3,16:19:51.15:927,51,0	1/1:2,23:25:45.63:867,46,0	1/1:7,17:24:13.38:458,13,0	1/1:3,30:33:45.15:893,45,0	1/1:2,15:17:30.10:595,30,0	1/1:4,11:15:12.04:238,12,0	0/0:18,0:18:51.18:0,51,1494	1/1:3,23:26:69.19:1289,69,0	1/1:4,32:36:87.30:1698,87,0	1/1:2,7:9:21.07:417,21,0
chr10	101170727	.	TG	T	2175.32	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.434;DP=549;FS=7.636;HRun=2;HaplotypeScore=54.5933;InbreedingCoeff=0.9993;MQ=94.03;MQ0=0;MQRankSum=-2.099;QD=32.96;ReadPosRankSum=1.800;VQSLOD=3.2452;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.17:0,57,828	0/0:11,0:11:27.09:0,27,404	0/0:29,0:29:67.72:0,68,1023	0/0:23,0:23:66.19:0,66,961	0/0:30,0:30:90.25:0,90,1301	0/0:29,0:29:87.28:0,87,1283	0/0:21,0:21:63.19:0,63,921	0/0:24,0:24:66.22:0,66,971	0/0:24,0:24:66.22:0,66,989	0/0:22,0:22:63.21:0,63,944	0/0:15,0:15:45.15:0,45,673	1/1:0,16:16:42.14:545,42,0	0/0:23,0:23:66.22:0,66,987	0/0:19,0:19:57.19:0,57,852	0/0:22,0:22:63.20:0,63,924	0/0:19,0:19:57.19:0,57,854	0/0:23,0:23:63.21:0,63,942	0/0:18,0:18:51.17:0,51,764	0/0:15,0:15:45.14:0,45,656	0/0:19,0:19:54.17:0,54,788	0/0:9,0:9:27.09:0,27,405	1/1:0,19:19:51.17:662,51,0	1/1:0,15:15:39.13:506,39,0	1/1:0,16:16:48.16:623,48,0	0/0:12,0:12:33.10:0,33,474	0/0:14,0:14:39.13:0,39,584	0/0:30,0:30:87.28:0,87,1285	0/0:12,0:12:36.12:0,36,539
chr10	101171235	.	GTA	G	34.46	PASS	AC=6;AF=0.429;AN=14;BaseQRankSum=3.313;DP=206;FS=2.680;HRun=0;HaplotypeScore=51.9485;MQ=14.72;MQ0=153;MQRankSum=-0.775;QD=1.15;ReadPosRankSum=0.634;VQSLOD=1.3715;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,0:3:2.92:17,3,0	./.	./.	./.	./.	./.	./.	./.	0/0:9,0:1:3.01:0,3,58	./.	0/0:16,0:4:12.04:0,12,229	./.	./.	./.	./.	./.	1/1:9,0:1:0.89:2,1,0	./.	1/1:8,10:15:13.32:100,13,0	./.	./.	0/0:9,0:4:9.03:0,9,167	./.	0/0:14,0:10:20.76:0,21,373	./.	./.	./.
chr10	101171862	.	GTA	G	37.17	PASS	AB=0.881;AC=6;AF=0.125;AN=48;BaseQRankSum=5.746;DP=710;FS=11.188;HRun=0;HaplotypeScore=235.4814;InbreedingCoeff=0.3919;MQ=40.28;MQ0=55;MQRankSum=-4.589;QD=0.91;ReadPosRankSum=-2.944;VQSLOD=0.7367;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:9,0:9:8.42:0,8,66	0/0:46,0:13:33.11:0,33,592	0/0:31,0:7:14.83:0,15,196	0/0:27,0:26:27.09:0,27,488	0/0:30,0:30:26.19:0,26,486	0/0:26,0:24:51.17:0,51,930	0/1:15,0:12:12.96:13,0,125	0/0:45,0:45:54.08:0,54,949	0/0:59,0:57:99:0,165,2730	0/0:25,0:25:42.14:0,42,762	0/0:33,0:28:15.39:0,15,176	0/0:47,0:45:78.22:0,78,1328	0/0:35,0:35:38.96:0,39,663	./.	0/0:1,1:2:2.94:0,3,18	0/0:35,0:33:69.19:0,69,1226	0/0:30,0:26:74.99:0,75,1258	0/0:9,0:7:13.72:0,14,126	0/0:43,4:47:59.96:0,60,472	./.	0/0:42,0:39:17.67:0,18,249	0/0:38,0:34:8.49:0,8,197	./.	0/0:32,0:32:72.19:0,72,1277	0/1:11,2:13:64.02:64,0,134	1/1:6,1:7:2.38:12,2,0	1/1:3,1:4:5.89:57,6,0
chr10	101171872	.	A	ATG	825.23	PASS	AB=1.000;AC=14;AF=0.292;AN=48;BaseQRankSum=10.300;DP=761;FS=75.031;HRun=0;HaplotypeScore=253.3561;InbreedingCoeff=0.6605;MQ=41.67;MQ0=36;MQRankSum=-10.150;QD=4.41;ReadPosRankSum=-2.262;VQSLOD=0.3172;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:8,1:9:14.30:141,14,0	0/0:56,0:19:51.16:0,51,660	0/0:39,0:13:11.85:0,12,304	0/0:27,0:27:32.91:0,33,423	0/0:34,0:34:27.09:0,27,359	0/0:29,0:27:63.17:0,63,798	1/1:13,1:11:4.40:117,4,0	0/0:48,0:48:63.16:0,63,784	0/0:54,0:52:99:0,147,1939	0/0:28,0:28:51.17:0,51,678	0/0:33,0:30:10.36:0,10,158	0/0:46,0:46:81.24:0,81,1041	0/0:33,0:33:39.11:0,39,503	./.	1/1:5,0:5:2.99:26,3,0	0/0:35,0:33:75.21:0,75,959	0/0:27,0:26:22.29:0,22,870	1/1:9,1:8:7.07:120,7,0	1/1:51,3:55:40.88:489,41,0	./.	0/1:48,0:46:20.29:20,0,64	0/1:38,0:36:21.43:45,0,21	./.	0/0:32,0:32:71.90:0,72,939	0/0:16,0:17:10.32:0,10,207	0/0:8,0:10:11.78:0,12,68	1/1:8,0:8:6.56:30,7,0
chr10	101171878	.	GTATA	G	176.66	PASS	AB=0.991;AC=10;AF=0.208;AN=48;BaseQRankSum=9.269;DP=791;FS=58.179;HRun=0;HaplotypeScore=280.2012;InbreedingCoeff=0.0839;MQ=45.02;MQ0=18;MQRankSum=-8.287;QD=0.83;ReadPosRankSum=-1.438;VQSLOD=0.2738;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/1:9,0:9:0.85:39,0,1	0/0:58,0:24:69.70:0,70,1688	0/0:44,0:19:35.22:0,35,930	0/0:33,0:33:45.13:0,45,1103	0/0:35,0:35:29.40:0,29,792	0/0:27,0:26:69.24:0,69,1830	0/1:14,0:11:53.33:80,0,53	0/0:51,0:51:69.18:0,69,1741	0/0:56,0:54:99:0,163,4339	0/0:29,0:29:54:0,54,1464	0/0:31,0:30:3.17:0,3,330	0/0:49,0:49:87.08:0,87,2295	0/0:35,0:35:41.85:0,42,1095	./.	0/0:6,0:6:2.88:0,3,15	0/0:34,0:33:75.24:0,75,2012	0/0:30,0:28:58.83:0,59,2028	0/1:10,0:8:21.22:21,0,45	0/1:55,1:56:7.69:8,0,81	./.	0/1:47,0:46:4.53:5,0,183	0/1:37,0:36:13.50:14,0,95	./.	0/0:31,0:31:72.69:0,73,1935	0/1:16,1:17:36.48:36,0,301	0/1:10,0:10:6.94:29,0,7	1/1:11,2:13:10.84:80,11,0
chr10	101171880	.	A	ATG	272.20	PASS	AB=0.992;AC=10;AF=0.208;AN=48;BaseQRankSum=9.561;DP=794;FS=56.281;HRun=0;HaplotypeScore=266.6724;InbreedingCoeff=0.4715;MQ=45.10;MQ0=15;MQRankSum=-8.856;QD=1.35;ReadPosRankSum=-0.451;VQSLOD=0.9336;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:7,2:9:14.15:139,14,0	0/0:58,0:25:68.72:0,69,986	0/0:46,0:19:24.30:0,24,522	0/0:32,0:32:41.96:0,42,636	0/0:36,0:36:30.10:0,30,456	0/0:27,0:26:69.21:0,69,1015	0/0:14,0:11:14.88:0,15,82	0/0:50,0:50:63.18:0,63,922	0/0:57,0:55:99:0,166,2467	0/0:29,0:29:54.17:0,54,804	0/1:31,1:30:1.26:1,0,169	0/0:49,0:49:87.28:0,87,1290	0/0:37,0:37:42.12:0,42,618	./.	0/0:6,0:6:2.68:0,3,11	0/0:36,0:35:72.04:0,72,1090	0/0:31,0:29:73.06:0,73,1138	0/1:9,0:8:9.45:9,0,53	1/1:49,7:56:21.61:153,22,0	./.	0/1:45,0:46:25.02:25,0,80	0/1:36,0:36:28.76:44,0,29	./.	0/0:30,0:30:68.92:0,69,1051	0/0:17,0:17:19.89:0,20,343	0/0:10,0:10:12.90:0,13,89	1/1:13,0:13:6.73:44,7,0
chr10	101171884	.	G	GGTA	643.71	PASS	AB=0.916;AC=5;AF=0.100;AN=50;BaseQRankSum=7.804;DP=807;FS=35.634;HRun=0;HaplotypeScore=283.8581;InbreedingCoeff=0.0798;MQ=45.41;MQ0=16;MQRankSum=-6.990;QD=4.44;ReadPosRankSum=-4.662;VQSLOD=1.0506;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:0.47:1,0,0	0/0:9,0:9:1.71:0,2,20	0/0:63,0:29:83.82:0,84,1378	0/0:47,0:22:53.84:0,54,853	0/0:32,0:32:45.39:0,45,832	0/0:35,0:35:30.09:0,30,525	0/0:27,0:27:69.14:0,69,1212	0/0:13,0:10:17.63:0,18,199	0/0:45,0:45:65.43:0,65,1191	0/0:55,0:55:99:0,160,2919	0/0:30,0:30:54.19:0,54,996	0/0:32,0:30:9.66:0,10,230	0/0:50,0:50:92.99:0,93,1577	0/0:36,0:36:42.14:0,42,773	./.	0/0:10,0:10:3.01:0,3,34	0/0:33,0:32:75.24:0,75,1334	0/0:32,0:30:87.08:0,87,1404	0/0:9,0:8:18.82:0,19,199	0/1:57,0:57:0.87:1,0,64	./.	0/1:39,5:49:81.70:364,0,82	0/1:25,7:36:32.95:366,0,33	./.	0/0:31,0:31:75.02:0,75,1349	0/0:19,0:19:50.40:0,50,595	0/0:11,0:11:12.44:0,12,183	0/0:14,0:14:14.99:0,15,169
chr10	101171892	.	G	GTA	343.48	PASS	AB=0.826;AC=9;AF=0.188;AN=48;BaseQRankSum=6.498;DP=788;FS=20.011;HRun=0;HaplotypeScore=269.5449;InbreedingCoeff=0.6038;MQ=47.05;MQ0=12;MQRankSum=-4.715;QD=7.16;ReadPosRankSum=-2.001;VQSLOD=1.4120;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:7,2:9:1.80:23,2,0	0/0:69,0:37:61.98:0,62,1219	0/0:49,0:25:59.99:0,60,804	0/0:30,0:30:41.68:0,42,620	0/0:37,0:37:33.11:0,33,501	0/0:28,0:28:78.19:0,78,1133	1/1:6,3:8:14.77:166,15,0	0/0:41,0:41:63.21:0,63,959	0/0:57,0:57:99:0,165,2392	0/0:27,0:27:51.16:0,51,759	0/0:32,0:30:11.98:0,12,184	0/0:50,0:50:84.25:0,84,1256	0/0:37,0:37:45.15:0,45,680	./.	1/1:6,4:10:3.01:58,3,0	0/0:32,0:31:72.03:0,72,1055	0/0:26,1:25:4.96:0,5,818	1/1:0,1:1:3.01:56,3,0	0/0:47,1:49:3.66:0,4,15	./.	0/0:47,0:49:22.54:0,23,154	0/0:36,0:36:10.87:0,11,91	./.	0/0:29,0:29:71.94:0,72,1101	0/1:15,4:19:99:171,0,370	0/0:14,0:14:22.06:0,22,185	0/0:17,0:17:14.72:0,15,151
chr10	101171898	.	A	ATTG	284.64	PASS	AB=0.964;AC=9;AF=0.167;AN=54;BaseQRankSum=8.688;DP=799;FS=38.230;HRun=0;HaplotypeScore=285.4548;InbreedingCoeff=0.1650;MQ=48.46;MQ0=10;MQRankSum=-7.572;QD=1.51;ReadPosRankSum=-7.652;VQSLOD=-0.5795;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:1.55:4,2,0	0/1:8,2:10:18.18:81,0,18	0/0:69,0:41:94.63:0,95,1693	0/0:47,0:26:59.50:0,59,939	0/0:29,0:29:43.14:0,43,705	0/0:35,0:35:26.80:0,27,476	0/0:26,0:26:72.25:0,72,1268	0/0:9,0:8:16.04:0,16,99	0/0:42,0:42:58.29:0,58,1029	0/0:53,0:53:99:0,154,2647	0/0:27,0:27:46.18:0,46,843	0/0:31,0:29:12.22:0,12,216	0/0:49,0:49:83.24:0,83,1464	0/0:35,0:35:44.86:0,45,778	0/1:17,0:17:0:0,0,0	0/0:15,0:15:2.07:0,2,8	0/0:31,0:30:72.04:0,72,1236	0/0:28,0:26:74.98:0,75,1184	0/1:3,0:3:5.49:5,0,6	0/1:49,4:54:82.20:82,0,215	./.	0/1:50,0:50:82.21:82,0,93	0/1:36,0:35:34.10:142,0,34	0/1:12,0:11:0.10:0,0,0	0/0:26,0:26:75.03:0,75,1319	0/0:19,0:19:56.20:0,56,490	0/0:18,0:18:22.30:0,22,202	0/0:20,0:20:3.79:0,4,106
chr10	101171904	.	A	ATG	910.13	PASS	AB=0.817;AC=13;AF=0.250;AN=52;BaseQRankSum=9.897;DP=808;FS=44.896;HRun=0;HaplotypeScore=280.0176;InbreedingCoeff=0.4012;MQ=47.88;MQ0=7;MQRankSum=-9.370;QD=6.03;ReadPosRankSum=-2.167;VQSLOD=1.5135;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,1:10:0.08:0,0,10	0/0:64,0:42:94.17:0,94,1285	0/0:51,0:30:65.93:0,66,881	0/0:28,0:28:45.15:0,45,661	0/0:34,0:34:30.10:0,30,439	0/0:29,0:29:75.19:0,75,1075	1/1:7,0:7:8.16:60,8,0	0/0:45,0:45:65.64:0,66,966	0/0:56,0:56:99:0,166,2370	0/0:28,0:28:48.14:0,48,686	0/0:32,0:31:11.58:0,12,177	0/0:49,0:49:84.16:0,84,1168	0/0:34,0:34:45.14:0,45,643	1/1:7,10:17:3:25,3,0	1/1:7,8:15:1.18:2,1,0	0/0:29,0:28:63.03:0,63,904	0/0:28,0:26:25.56:0,26,895	1/1:2,1:3:8.79:86,9,0	0/0:30,16:52:18.70:0,19,109	./.	0/0:48,0:50:9.17:0,9,100	0/1:35,0:35:1.98:2,0,52	0/1:13,0:12:0:0,0,0	0/0:29,0:29:77.78:0,78,1094	0/1:14,7:21:99:344,0,156	0/1:11,7:19:61.94:263,0,62	0/1:7,13:20:77.74:264,0,78
chr10	101171912	.	A	ATG	38.71	PASS	AB=0.985;AC=10;AF=0.192;AN=52;BaseQRankSum=9.463;DP=792;FS=27.026;HRun=0;HaplotypeScore=265.1185;InbreedingCoeff=0.2016;MQ=47.63;MQ0=2;MQRankSum=-8.146;QD=0.22;ReadPosRankSum=0.755;VQSLOD=1.3576;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/1:8,0:8:0.80:8,0,1	0/0:62,0:40:86.50:0,87,1392	0/0:47,0:30:73.10:0,73,1056	0/0:27,0:27:48.15:0,48,735	0/0:33,0:33:27.09:0,27,411	0/0:28,0:28:72.12:0,72,1053	0/0:5,0:5:7.27:0,7,82	0/0:47,0:47:72.24:0,72,1098	0/0:58,0:58:99:0,165,2433	0/0:28,0:28:48.07:0,48,688	0/0:28,3:30:11.58:0,12,175	0/0:51,0:51:90.25:0,90,1369	0/0:37,0:37:57.19:0,57,869	0/0:17,0:17:2.74:0,3,12	0/1:15,0:15:0:0,0,0	0/0:29,0:28:63.01:0,63,900	0/0:27,0:26:24.01:0,24,908	0/1:6,0:6:5.44:5,0,123	1/1:43,2:45:4.05:12,4,0	./.	0/0:33,15:48:5.66:0,6,94	0/1:26,4:29:0.44:0,0,56	0/1:13,0:12:0:0,0,0	0/0:29,0:29:78.18:0,78,1120	0/1:22,0:22:63.95:64,0,231	0/1:19,0:19:41.38:41,0,73	0/1:22,0:22:21.59:22,0,149
chr10	101171915	.	TGTGA	T	157.66	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=8.443;DP=778;FS=22.603;HRun=0;HaplotypeScore=275.6814;InbreedingCoeff=0.4308;MQ=47.85;MQ0=5;MQRankSum=-6.472;QD=1.03;ReadPosRankSum=-3.586;VQSLOD=0.4916;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:7:0:0,0,0	1/1:4,2:6:8.62:99,9,0	0/0:59,0:39:45.88:0,46,2123	0/0:48,0:30:71.21:0,71,1687	0/0:28,0:28:48.08:0,48,1238	0/0:33,0:33:29.14:0,29,789	0/0:25,0:25:69.19:0,69,1741	0/0:4,0:4:9.03:0,9,157	0/0:46,0:46:74.74:0,75,1951	0/0:56,0:56:99:0,153,3893	0/0:30,0:30:44.98:0,45,1197	0/0:30,0:29:8.14:0,8,142	0/0:51,0:51:92.92:0,93,2356	0/0:38,0:38:59.45:0,59,1498	0/0:17,0:17:2.90:0,3,45	0/1:15,0:15:0.19:0,0,0	0/0:26,0:25:59.97:0,60,1455	0/0:27,0:26:59.28:0,59,1523	0/1:6,0:6:1.80:2,0,248	1/1:37,6:45:25.91:147,26,0	./.	0/1:48,0:48:17.60:18,0,96	0/1:26,0:25:18.36:18,0,38	0/0:11,0:10:0:0,0,1	0/0:29,0:29:84.01:0,84,1813	0/0:23,0:23:1.03:0,1,872	0/0:20,1:21:12.31:0,12,408	0/0:22,0:22:31.23:0,31,578
chr10	101171916	.	GTGA	G	91.88	PASS	AB=0.920;AC=9;AF=0.167;AN=54;BaseQRankSum=7.117;DP=777;FS=15.173;HRun=0;HaplotypeScore=270.0798;InbreedingCoeff=0.4714;MQ=47.89;MQ0=5;MQRankSum=-5.245;QD=0.63;ReadPosRankSum=-5.377;VQSLOD=0.2456;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:0.47:1,0,0	1/1:6,0:6:4.04:12,4,0	0/0:58,0:39:66.57:0,67,2089	0/0:47,0:31:81.90:0,82,1742	0/0:29,0:29:48.08:0,48,1172	0/0:33,0:33:32.32:0,32,782	0/0:25,0:25:69.24:0,69,1676	0/0:4,0:4:9.03:0,9,204	0/0:48,0:48:78.09:0,78,1844	0/0:54,0:54:99:0,163,3820	0/0:28,0:28:44.96:0,45,1106	0/0:29,0:28:8.62:0,9,215	0/0:52,0:52:92.98:0,93,2217	0/0:38,0:38:59.60:0,60,1416	0/0:17,0:17:2.92:0,3,45	0/1:15,0:15:0.04:0,0,0	0/0:25,0:24:66.15:0,66,1472	0/0:27,0:26:72.38:0,72,1585	0/0:7,0:7:21.02:0,21,383	1/1:43,0:44:8.11:111,8,0	./.	0/1:43,3:47:54.05:54,0,125	0/1:21,5:25:28.92:29,0,65	0/0:11,0:10:0:0,0,1	0/0:29,0:29:84.20:0,84,1869	0/0:25,0:25:73.24:0,73,1279	0/0:21,0:21:36.45:0,36,610	0/0:22,0:22:48.76:0,49,781
chr10	101171918	.	GAGTGTGTA	G	76.53	PASS	AB=0.965;AC=8;AF=0.148;AN=54;BaseQRankSum=7.738;DP=769;FS=19.101;HRun=0;HaplotypeScore=308.0204;InbreedingCoeff=0.4551;MQ=48.12;MQ0=7;MQRankSum=-6.421;QD=0.54;ReadPosRankSum=-3.802;VQSLOD=0.9033;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:8:0:0,0,0	1/1:6,0:6:5.44:23,5,0	0/0:57,0:39:99:0,102,2960	0/0:48,0:31:66.49:0,66,2496	0/0:29,0:29:47.93:0,48,2042	0/0:33,0:33:32.09:0,32,1350	0/0:25,0:25:72.72:0,73,2707	0/0:5,0:5:12.04:0,12,235	0/0:47,0:47:77.81:0,78,3220	0/0:51,0:51:99:0,154,6227	0/0:27,0:27:47.65:0,48,1964	0/0:24,3:26:8.98:0,9,130	0/0:51,0:51:93.01:0,93,3835	0/0:39,0:39:62.60:0,63,2554	0/0:17,0:17:2.93:0,3,45	0/1:15,0:15:0.18:0,0,0	0/0:24,0:23:63.06:0,63,2403	0/0:26,0:25:62.01:0,62,2480	0/0:7,0:7:1.26:0,1,313	1/1:43,0:44:9.43:48,9,0	./.	0/1:40,3:45:56.05:56,0,99	0/1:24,0:24:66.21:68,0,66	0/0:9,2:10:0.47:0,0,1	0/0:31,0:31:90.14:0,90,3018	0/0:25,0:25:35.10:0,35,1129	0/0:22,0:22:21.51:0,22,379	0/0:22,0:22:30.88:0,31,639
chr10	101171924	.	GTA	G	1290.45	PASS	AB=0.823;AC=20;AF=0.370;AN=54;BaseQRankSum=13.032;DP=785;FS=107.878;HRun=0;HaplotypeScore=261.3697;InbreedingCoeff=0.6229;MQ=47.27;MQ0=8;MQRankSum=-11.534;QD=5.20;ReadPosRankSum=-0.981;VQSLOD=-0.2366;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:0:0,0,0	1/1:3,1:6:0.47:1,0,0	0/0:55,1:41:85.90:0,86,1104	0/0:50,0:28:67.49:0,67,927	0/0:30,0:30:57.08:0,57,918	0/0:32,0:32:25.95:0,26,477	0/0:25,0:25:66.14:0,66,1066	1/1:10,0:9:7.05:101,7,0	0/0:46,0:46:72.15:0,72,1179	0/0:51,0:51:99:0,141,2295	0/0:27,0:27:47.96:0,48,784	1/1:22,1:23:2.95:27,3,0	0/0:54,0:54:87.14:0,87,1475	0/0:41,0:41:62.90:0,63,1030	1/1:14,0:18:2.90:18,3,0	0/0:15,0:15:0:0,0,0	0/0:25,0:24:60.01:0,60,994	0/0:29,0:28:68.84:0,69,1002	0/1:7,0:8:11.62:91,0,12	1/1:34,7:43:8.85:56,9,0	./.	1/1:42,2:44:9.90:52,10,0	1/1:24,1:24:0.67:21,1,0	0/0:10,1:10:0:0,0,1	0/0:32,0:32:78.21:0,78,1245	0/1:17,4:25:50.32:369,0,50	1/1:19,4:23:32.39:277,32,0	1/1:17,6:23:48.76:447,49,0
chr10	101171930	.	ATG	A	1679.52	PASS	AB=0.787;AC=16;AF=0.296;AN=54;BaseQRankSum=11.854;DP=769;FS=82.729;HRun=0;HaplotypeScore=256.5669;InbreedingCoeff=0.3038;MQ=43.63;MQ0=11;MQRankSum=-11.129;QD=6.17;ReadPosRankSum=-0.761;VQSLOD=0.0968;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,2:13:0.06:0,0,0	0/1:6,1:7:1.77:16,0,2	0/0:51,0:35:54.19:0,54,1066	0/0:46,0:26:59.50:0,59,901	0/0:31,0:31:63.08:0,63,1074	0/0:34,0:34:31:0,31,541	0/0:25,0:25:52.74:0,53,1017	0/1:8,6:11:16.14:189,0,16	0/0:46,0:46:69.14:0,69,1159	0/0:49,0:49:99:0,135,2307	0/0:27,0:27:50.96:0,51,866	0/1:15,0:15:6.75:13,0,7	0/0:54,0:54:99:0,99,1629	0/0:36,0:36:62.94:0,63,1127	1/1:9,11:20:2.69:36,3,0	0/1:5,10:15:0.02:0,0,0	0/0:25,0:24:57.18:0,57,984	0/0:28,0:27:68.74:0,69,1086	0/1:7,3:9:36.65:154,0,37	0/1:23,20:43:0.81:1,0,23	./.	1/1:36,0:36:1.44:12,1,0	0/1:21,0:21:0.13:0,0,13	0/0:10,0:9:0:0,0,1	0/0:31,0:31:74.81:0,75,1280	0/1:17,10:27:99:451,0,143	0/1:12,15:28:3.28:407,0,3	1/1:7,16:23:47.11:542,47,0
chr10	101171934	.	GTA	G	1273.99	PASS	AB=0.969;AC=18;AF=0.333;AN=54;BaseQRankSum=12.652;DP=778;FS=85.054;HRun=0;HaplotypeScore=267.5198;InbreedingCoeff=0.4281;MQ=43.44;MQ0=14;MQRankSum=-11.536;QD=4.74;ReadPosRankSum=-1.229;VQSLOD=-0.5707;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:1.26:4,1,0	1/1:8,0:8:0.25:36,0,0	0/0:46,1:32:27.75:0,28,917	0/0:44,0:25:62.62:0,63,972	0/0:32,0:32:69.12:0,69,1134	0/0:35,0:35:34.02:0,34,613	0/0:24,0:24:55.68:0,56,1008	0/1:16,0:12:22.97:84,0,23	0/0:45,0:45:69.14:0,69,1164	0/0:48,0:47:99:0,138,2353	0/0:29,0:29:54.01:0,54,889	0/1:15,2:17:6.71:19,0,7	0/0:55,0:55:99:0,111,1842	0/0:36,0:36:62.93:0,63,1117	1/1:21,0:21:2.62:18,3,0	0/0:15,0:15:0:0,0,0	0/0:24,0:23:53.98:0,54,905	0/0:28,0:28:62.70:0,63,1096	0/1:9,0:8:11.29:73,0,11	0/1:42,0:42:3.42:34,0,3	./.	1/1:28,11:39:11.08:52,11,0	0/1:20,2:22:1.56:2,0,14	0/0:10,0:9:0:0,0,1	0/0:32,0:32:75.21:0,75,1288	0/1:29,0:29:99:343,0,114	1/1:27,2:29:26.54:355,27,0	1/1:23,0:23:35.43:417,35,0
chr10	101171939	.	T	TTTG	485.63	PASS	AB=0.960;AC=8;AF=0.148;AN=54;BaseQRankSum=6.481;DP=776;FS=26.663;HRun=0;HaplotypeScore=272.2188;InbreedingCoeff=0.3953;MQ=42.14;MQ0=17;MQRankSum=-6.013;QD=3.60;ReadPosRankSum=-5.643;VQSLOD=0.3704;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:0.43:0,0,16	0/0:8,0:8:5.22:0,5,39	0/0:44,0:28:71.91:0,72,1092	0/0:47,0:25:66.19:0,66,1138	0/0:32,0:32:72.23:0,72,1281	0/0:37,0:37:38.96:0,39,717	0/0:26,0:26:68.77:0,69,1183	0/0:22,0:18:37.43:0,37,454	0/0:41,0:41:69.22:0,69,1254	0/0:48,0:47:99:0,138,2504	0/0:26,0:26:48.16:0,48,895	0/0:17,0:17:4.10:0,4,50	0/0:57,0:57:99:0,120,2133	0/0:38,0:38:66.04:0,66,1188	0/0:21,0:21:2.51:0,3,19	0/1:15,0:15:0.21:0,0,0	0/0:23,0:22:52.06:0,52,948	0/0:28,0:27:65.78:0,66,1162	0/0:9,0:8:23.90:0,24,327	0/1:40,0:40:3.71:4,0,71	./.	0/1:30,5:37:23.50:267,0,23	1/1:11,4:19:29.44:320,29,0	1/1:10,0:9:0.31:0,0,0	0/0:34,0:33:78.24:0,78,1412	0/0:25,0:25:72.12:0,72,913	0/0:29,0:29:58.78:0,59,710	0/0:24,0:24:55.57:0,56,692
chr10	101171940	.	G	GTC	52.33	PASS	AB=0.944;AC=9;AF=0.167;AN=54;BaseQRankSum=6.148;DP=777;FS=10.679;HRun=0;HaplotypeScore=264.8449;InbreedingCoeff=0.3260;MQ=42.07;MQ0=17;MQRankSum=-6.055;QD=0.44;ReadPosRankSum=-4.033;VQSLOD=0.5579;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:16:2.65:14,3,0	0/0:6,2:8:0.71:0,1,3	0/0:44,0:28:63.03:0,63,889	0/0:47,0:25:72.13:0,72,974	0/0:32,0:32:68.95:0,69,997	0/0:37,0:37:39.13:0,39,594	0/0:26,0:26:65.93:0,66,921	0/1:21,0:18:3.17:3,0,246	0/0:41,0:41:69.22:0,69,1034	0/0:48,0:47:99:0,132,1995	0/0:25,0:25:48.06:0,48,732	0/1:17,0:17:0.93:1,0,34	0/0:57,0:57:99:0,120,1713	0/0:37,0:37:66.18:0,66,962	1/1:17,4:21:2.17:4,2,0	0/0:15,0:15:0:0,0,0	0/0:23,0:22:52.38:0,52,734	0/0:26,1:27:57.04:0,57,909	0/1:8,1:8:19.81:20,0,142	0/0:41,1:42:6.39:0,6,73	./.	0/0:37,0:37:23.19:0,23,139	0/0:18,0:18:14.65:0,15,59	0/1:10,0:9:0:0,0,0	0/0:34,0:33:78.23:0,78,1148	0/1:21,4:25:99:114,0,418	0/0:29,0:29:25.44:0,25,385	0/0:24,0:24:37.16:0,37,417
chr10	101171944	.	GTA	G	192.70	PASS	AB=0.993;AC=10;AF=0.185;AN=54;BaseQRankSum=8.344;DP=773;FS=26.185;HRun=0;HaplotypeScore=258.3113;InbreedingCoeff=0.1557;MQ=42.04;MQ0=18;MQRankSum=-8.468;QD=1.15;ReadPosRankSum=-2.674;VQSLOD=0.7404;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:3.65:27,4,0	1/1:8,0:8:0.24:37,0,0	0/0:45,0:27:69.50:0,70,1003	0/0:50,0:26:72.02:0,72,1081	0/0:30,0:30:63.08:0,63,1086	0/0:37,0:37:37.05:0,37,729	0/0:27,0:27:67.57:0,68,1073	0/1:22,1:19:19.68:20,0,109	0/0:39,0:39:66.14:0,66,1235	0/0:46,0:45:99:0,135,2405	0/0:27,0:27:53.98:0,54,865	0/0:17,0:17:5.41:0,5,25	0/0:57,0:57:99:0,111,1947	0/0:38,0:38:65.92:0,66,1174	0/1:21,0:21:0.01:0,0,0	0/0:12,4:16:3:0,3,25	0/0:22,0:21:44.98:0,45,811	0/0:29,0:28:55.61:0,56,1061	0/1:8,0:7:11.76:12,0,67	0/1:40,0:40:31.58:32,0,38	./.	0/0:33,0:33:10.77:0,11,101	0/0:20,0:20:11.87:0,12,51	0/0:10,0:9:0:0,0,1	0/0:34,0:33:75.20:0,75,1313	0/1:24,0:24:83.86:84,0,257	0/1:27,0:27:99:109,0,145	0/0:24,0:24:2.23:0,2,146
chr10	101171948	.	G	GTC	129.53	PASS	AB=0.978;AC=11;AF=0.196;AN=56;BaseQRankSum=7.472;DP=795;FS=22.191;HRun=0;HaplotypeScore=271.5359;InbreedingCoeff=0.2350;MQ=40.69;MQ0=19;MQRankSum=-7.074;QD=0.66;ReadPosRankSum=-5.226;VQSLOD=0.2397;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:0.76:0,1,2	0/1:9,0:9:0.31:0,0,1	0/0:45,0:24:58.64:0,59,775	0/0:53,0:27:68.79:0,69,872	0/0:31,0:31:62.94:0,63,896	0/0:38,0:38:45.11:0,45,640	0/0:26,0:26:68.99:0,69,979	0/1:30,0:26:29.78:30,0,221	0/0:41,0:41:75.22:0,75,1099	0/0:50,0:49:99:0,141,2064	0/0:27,0:27:45.05:0,45,686	1/1:18,0:18:4.89:29,5,0	0/0:54,0:54:99:0,108,1581	0/0:40,0:40:72.21:0,72,1052	1/1:22,0:22:2.66:5,3,0	0/0:15,0:15:3.01:0,3,46	0/0:20,0:19:42.14:0,42,634	0/0:26,0:26:44.62:0,45,801	0/1:11,0:10:65.79:66,0,125	0/1:38,0:37:10.46:10,0,70	0/0:6,0:4:0:0,0,0	0/0:30,1:31:17.49:0,17,72	0/0:18,2:20:7.08:0,7,30	0/1:9,1:10:0:0,0,0	0/0:33,0:32:69.21:0,69,1026	0/1:25,0:25:75.28:75,0,498	0/1:33,0:33:39.22:39,0,301	0/0:24,0:24:19.82:0,20,420
chr10	101171958	.	G	GTA	1540.41	PASS	AB=0.762;AC=14;AF=0.250;AN=56;BaseQRankSum=10.969;DP=783;FS=79.971;HRun=0;HaplotypeScore=254.6931;InbreedingCoeff=0.1785;MQ=41.76;MQ0=18;MQRankSum=-10.328;QD=6.85;ReadPosRankSum=-1.373;VQSLOD=0.1220;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,1:17:0.12:0,0,1	1/1:7,1:8:0.85:2,1,0	0/0:53,0:26:27.80:0,28,819	0/0:50,0:23:28.36:0,28,820	0/0:30,0:30:56.76:0,57,865	0/0:36,0:36:42.14:0,42,643	0/0:30,0:30:81.60:0,82,1159	0/1:17,0:23:15.60:331,0,16	0/0:48,0:48:93.27:0,93,1368	0/0:44,0:43:99:0,126,1881	0/0:26,0:26:42.01:0,42,600	1/1:16,0:16:1.90:6,2,0	0/0:52,0:52:96.27:0,96,1461	0/0:39,0:39:69.18:0,69,1029	1/1:17,3:20:2.66:5,3,0	0/0:11,6:18:2.73:0,3,46	0/0:21,0:20:42.14:0,42,640	0/0:25,0:25:57.40:0,57,887	0/1:6,2:11:38.72:237,0,39	0/1:24,9:32:10.94:11,0,51	0/0:4,0:4:0.47:0,0,1	0/0:27,0:27:16.16:0,16,94	0/0:21,0:21:19.91:0,20,153	0/1:11,0:10:0.17:0,0,0	0/0:32,0:31:68.95:0,69,1014	0/1:21,6:28:99:351,0,189	0/1:20,9:31:75.78:407,0,76	0/1:11,10:22:99:317,0,144
chr10	101171974	.	A	ATGGGG	153.59	PASS	AB=0.913;AC=6;AF=0.107;AN=56;BaseQRankSum=5.463;DP=737;FS=7.344;HRun=0;HaplotypeScore=274.5126;InbreedingCoeff=0.3323;MQ=44.66;MQ0=16;MQRankSum=-4.099;QD=1.71;ReadPosRankSum=-4.732;VQSLOD=0.8800;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:0.91:2,1,0	0/0:8,0:8:5.93:0,6,100	0/0:55,0:21:60.20:0,60,1137	0/0:52,0:29:60.90:0,61,1493	0/0:35,0:35:57.20:0,57,1227	0/0:31,0:30:44.92:0,45,936	0/0:24,0:24:66.21:0,66,1392	0/0:23,0:21:51.12:0,51,741	0/0:46,0:46:99:0,102,2181	0/0:45,0:45:99:0,126,2655	0/0:26,0:26:36.12:0,36,766	0/0:16,0:14:2.94:0,3,52	0/0:52,0:52:99:0,117,2540	0/0:39,0:39:75.73:0,76,1595	0/1:13,0:13:0:1,0,0	0/0:16,0:15:12.04:0,12,212	0/0:23,0:23:54.19:0,54,1133	0/0:27,0:27:66.18:0,66,1352	0/0:11,0:10:24.07:0,24,411	0/0:19,0:18:4.37:0,4,74	0/0:3,0:2:0:0,0,0	0/1:18,6:22:99:226,0,139	0/1:19,4:23:5.64:6,0,337	0/1:10,0:10:0.25:1,0,0	0/0:30,0:30:78.22:0,78,1649	0/0:18,0:18:37.54:0,38,684	0/0:30,0:30:52.79:0,53,795	0/0:18,0:18:33.19:0,33,357
chr10	101171976	.	GTCTC	G	48.86	PASS	AB=0.994;AC=9;AF=0.161;AN=56;BaseQRankSum=8.041;DP=728;FS=13.671;HRun=0;HaplotypeScore=252.1290;InbreedingCoeff=0.1588;MQ=44.81;MQ0=16;MQRankSum=-8.097;QD=0.40;ReadPosRankSum=-4.423;VQSLOD=0.6924;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:3.25:15,3,0	0/0:8,0:8:4.80:0,5,19	0/0:57,0:21:55.12:0,55,1004	0/0:55,0:31:82.67:0,83,1773	0/0:32,0:32:63.14:0,63,1579	0/0:32,0:31:46.99:0,47,1304	0/0:23,0:23:63.01:0,63,1718	0/0:22,0:20:4.16:0,4,191	0/0:47,0:47:99:0,107,2721	0/0:42,0:42:99:0,123,3245	0/0:26,0:26:42.06:0,42,943	0/0:16,0:14:5.95:0,6,67	0/0:52,0:52:99:0,123,3210	0/0:38,0:38:74.83:0,75,2034	0/0:13,0:13:2.65:0,3,6	0/0:13,3:15:8.94:0,9,133	0/0:23,0:23:57.03:0,57,1410	0/0:26,2:28:4.08:0,4,1501	0/0:9,0:8:12.59:0,13,101	0/0:18,0:17:8.82:0,9,60	1/1:2,0:2:0.47:1,0,0	0/1:23,0:21:20.19:20,0,156	0/0:20,0:20:5.69:0,6,377	0/1:10,0:10:0.18:0,0,1	0/0:30,0:30:87.19:0,87,2176	0/1:18,0:18:59.13:59,0,219	0/1:29,1:30:24.93:25,0,273	0/1:18,0:18:44.18:44,0,52
chr10	101171980	.	C	CTG	1677.14	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=7.726;DP=706;FS=84.924;HRun=0;HaplotypeScore=220.6413;InbreedingCoeff=0.5963;MQ=45.79;MQ0=15;MQRankSum=-8.019;QD=7.87;ReadPosRankSum=-2.381;VQSLOD=-0.1743;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:0.31:0,0,0	1/1:7,0:8:6.02:78,6,0	0/0:58,0:23:35.80:0,36,424	0/0:52,0:28:56.94:0,57,663	0/0:32,0:32:53.95:0,54,689	0/0:30,0:29:48.12:0,48,588	0/0:23,0:23:66.18:0,66,820	1/1:22,0:22:15.01:171,15,0	0/0:44,0:44:99:0,99,1239	0/0:40,0:40:99:0,99,1274	0/0:25,0:25:32.90:0,33,386	1/1:3,13:14:5.04:57,5,0	0/0:54,0:54:99:0,114,1414	0/0:38,0:38:69.20:0,69,872	1/1:11,0:11:2.66:5,3,0	0/1:14,0:13:26.59:105,0,27	0/0:22,0:22:48.13:0,48,599	0/0:29,0:30:59.64:0,60,673	1/1:8,0:7:3.45:106,3,0	0/1:13,0:12:0.93:1,0,32	0/0:4,0:4:0.47:0,0,1	1/1:9,15:22:7.46:179,7,0	1/1:6,16:22:21.03:352,21,0	0/0:2,8:10:2.76:0,3,24	0/0:31,0:31:84.06:0,84,1001	0/1:16,0:16:22.05:312,0,22	1/1:29,0:29:33.55:452,34,0	1/1:11,0:11:0.38:35,0,0
chr10	101171982	.	G	GTA	2030.85	PASS	AB=0.752;AC=18;AF=0.321;AN=56;BaseQRankSum=10.676;DP=729;FS=95.122;HRun=0;HaplotypeScore=225.8936;InbreedingCoeff=0.3045;MQ=45.57;MQ0=15;MQRankSum=-8.776;QD=8.83;ReadPosRankSum=-2.011;VQSLOD=-0.0434;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,12:21:0.31:0,0,0	1/1:4,5:9:6.02:115,6,0	0/0:59,0:23:47.22:0,47,638	0/0:51,0:27:69.12:0,69,916	0/0:31,0:31:56.96:0,57,850	0/0:28,0:28:54.62:0,55,780	0/0:24,0:24:66.22:0,66,1005	0/1:20,4:24:21.40:306,0,21	0/0:44,0:44:99:0,102,1525	0/0:41,0:41:99:0,114,1640	0/0:26,0:26:41.98:0,42,549	1/1:16,0:14:5.03:32,5,0	0/0:55,0:55:99:0,120,1777	0/0:39,0:39:81.21:0,81,1151	1/1:1,10:13:2.66:5,3,0	0/1:8,7:14:33.87:160,0,34	0/0:22,0:22:51.12:0,51,748	0/0:31,0:31:63.78:0,64,950	0/1:5,3:7:49.90:167,0,50	0/1:15,2:16:0.98:1,0,15	0/0:4,1:5:0.47:0,0,1	1/1:25,0:23:8.88:89,9,0	1/1:23,0:23:20.97:177,21,0	0/0:10,0:10:2.78:0,3,44	0/0:31,0:31:84.28:0,84,1246	0/1:9,9:18:93.83:486,0,94	0/1:13,16:30:34.53:600,0,35	0/1:10,1:11:55.15:55,0,67
chr10	101171984	.	G	GTA	689.66	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=10.142;DP=733;FS=81.903;HRun=0;HaplotypeScore=229.3694;InbreedingCoeff=0.2975;MQ=46.61;MQ0=15;MQRankSum=-7.923;QD=2.93;ReadPosRankSum=0.300;VQSLOD=-0.5991;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:0.31:0,0,1	1/1:9,0:9:5.95:42,6,0	0/0:60,0:25:49.60:0,50,673	0/0:53,0:29:69.06:0,69,913	0/0:30,0:30:59.95:0,60,874	0/0:31,0:30:57.14:0,57,802	0/0:25,0:25:69.22:0,69,1030	0/1:23,0:23:46.85:47,0,117	0/0:44,0:44:99:0,99,1502	0/0:39,0:39:99:0,111,1615	0/0:25,0:25:38.98:0,39,522	1/1:19,0:17:5.03:32,5,0	0/0:51,0:51:99:0,123,1799	0/0:40,0:40:87.13:0,87,1190	1/1:13,0:13:2.66:5,3,0	0/1:16,0:15:33.96:51,0,34	0/0:22,0:22:51.16:0,51,753	0/0:30,0:30:68.86:0,69,974	0/1:9,0:7:31.81:32,0,52	0/1:17,0:16:0.96:1,0,17	0/0:6,0:6:0.47:0,0,1	1/1:21,3:22:10.09:126,10,0	1/1:20,4:24:8.98:162,9,0	0/0:10,0:10:2.78:0,3,44	0/0:32,0:32:87.27:0,87,1268	0/1:19,0:19:99:115,0,168	0/1:30,0:30:51.66:224,0,52	0/1:11,0:11:13:13,0,50
chr10	101172002	.	GTTTA	G	1560.70	PASS	AB=0.954;AC=16;AF=0.286;AN=56;BaseQRankSum=6.875;DP=720;FS=61.752;HRun=0;HaplotypeScore=230.4471;InbreedingCoeff=0.6043;MQ=56.09;MQ0=8;MQRankSum=-5.986;QD=9.94;ReadPosRankSum=-2.185;VQSLOD=1.0686;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,1:22:18.36:265,18,0	1/1:10,1:11:8.98:69,9,0	0/0:47,0:28:62.76:0,63,1490	0/0:35,0:26:36.94:0,37,1284	0/0:34,0:34:96.79:0,97,1999	0/0:29,0:29:77.84:0,78,1795	0/0:28,0:28:81.22:0,81,2011	1/1:6,20:26:67.65:755,68,0	0/0:38,0:38:99:0,112,2717	0/0:35,0:35:99:0,105,2757	0/0:26,0:26:70.14:0,70,1342	0/0:25,0:23:61.54:0,62,929	0/0:55,0:55:99:0,160,4016	0/0:41,0:41:99:0,115,2594	0/0:16,0:16:2.65:0,3,6	0/1:13,0:12:2.28:2,0,83	0/0:20,0:20:47.77:0,48,1205	0/0:25,0:25:75.19:0,75,1864	1/1:9,0:8:12.60:166,13,0	1/1:13,0:16:2.94:18,3,0	1/1:1,9:10:0.47:1,0,0	0/0:26,0:24:51.57:0,52,841	0/0:30,0:30:62.93:0,63,1249	0/0:16,0:16:27.08:0,27,454	0/0:35,0:35:99:0,102,2455	0/1:17,0:18:3.21:229,0,3	0/1:22,3:26:32.51:214,0,33	0/1:5,0:5:10.19:10,0,17
chr10	101172306	.	CG	C	1416.69	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.587;DP=765;FS=5.765;HRun=3;HaplotypeScore=87.0600;InbreedingCoeff=0.9995;MQ=86.91;MQ0=0;MQRankSum=-3.645;QD=29.51;ReadPosRankSum=2.511;VQSLOD=3.3342;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,48:48:99:1512,123,0	0/0:11,0:11:33.10:0,33,446	0/0:36,0:36:95.38:0,95,1256	0/0:19,0:19:50.93:0,51,644	0/0:23,0:23:66.17:0,66,883	0/0:20,0:20:57.16:0,57,767	0/0:25,0:25:72.16:0,72,954	0/0:46,0:46:99:0,126,1695	0/0:30,0:30:90.24:0,90,1228	0/0:25,0:25:72.23:0,72,986	0/0:24,0:24:69.14:0,69,888	0/0:24,0:24:63.14:0,63,829	0/0:28,0:28:81.24:0,81,1105	0/0:32,0:32:93.16:0,93,1208	0/0:38,0:38:99:0,111,1522	0/0:25,0:25:69.12:0,69,895	0/0:21,0:21:63.21:0,63,884	0/0:14,0:14:42.14:0,42,591	0/0:26,0:26:75.12:0,75,916	0/0:28,0:28:74.99:0,75,956	0/0:33,0:33:99:0,99,1325	0/0:28,0:28:83.56:0,84,958	0/0:28,0:28:81.23:0,81,1113	0/0:28,0:28:84.21:0,84,1126	0/0:26,0:26:75.24:0,75,1035	0/0:36,0:36:99:0,108,1442	0/0:32,0:32:93.30:0,93,1283	0/0:11,0:11:33.04:0,33,440
chr10	101172925	.	AT	A	2091.91	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.119;DP=465;FS=2.814;HRun=7;HaplotypeScore=45.8068;InbreedingCoeff=0.9867;MQ=70.02;MQ0=0;MQRankSum=-3.780;QD=25.83;ReadPosRankSum=1.122;VQSLOD=4.0235;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:33.06:0,33,397	0/0:8,0:8:24.08:0,24,302	0/0:8,0:8:21.02:0,21,245	0/0:8,0:8:20.98:0,21,239	0/0:23,0:23:63.19:0,63,776	0/0:21,0:21:60.19:0,60,755	0/0:10,0:10:27.09:0,27,340	0/0:25,0:25:69.21:0,69,855	0/0:10,0:10:27.08:0,27,328	0/0:18,0:18:54.16:0,54,668	0/0:35,0:35:99:0,102,1259	1/1:2,19:21:57.13:582,57,0	0/0:9,0:9:27.09:0,27,340	0/0:9,0:9:18.06:0,18,226	0/0:20,0:20:57.18:0,57,717	1/1:2,21:23:63.14:643,63,0	0/0:22,0:22:57.18:0,57,717	0/0:21,0:21:57.08:0,57,679	0/0:14,0:14:30.10:0,30,377	0/0:22,0:22:63.19:0,63,778	0/0:14,0:14:42.12:0,42,514	1/1:0,8:8:21.05:214,21,0	1/1:0,25:25:69.16:704,69,0	1/1:0,4:4:12.03:122,12,0	0/0:20,0:20:57.14:0,57,699	0/0:20,0:20:60.19:0,60,755	0/0:21,0:21:51.15:0,51,628	0/0:15,0:15:45.14:0,45,566
chr10	101173052	.	T	TA	1447.58	PASS	AB=0.954;AC=12;AF=0.214;AN=56;BaseQRankSum=-3.594;DP=529;FS=1.756;HRun=10;HaplotypeScore=64.7406;InbreedingCoeff=0.7951;MQ=80.31;MQ0=1;MQRankSum=-0.408;QD=12.27;ReadPosRankSum=0.400;VQSLOD=3.3211;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:18:39.10:416,39,0	0/0:9,0:9:26.97:0,27,222	0/0:18,0:12:0.06:0,0,56	0/1:24,0:23:4.45:4,0,136	0/0:24,0:24:71.50:0,71,573	0/0:32,0:31:86.83:0,87,705	0/0:13,0:13:35.94:0,36,292	0/0:40,0:40:92.78:0,93,748	0/0:13,0:13:29.95:0,30,245	0/0:23,0:23:65.90:0,66,537	0/0:19,0:19:50.92:0,51,416	1/1:3,13:17:29.94:303,30,0	0/0:18,0:18:50.90:0,51,411	0/0:19,0:19:44.90:0,45,365	0/0:19,0:19:41.94:0,42,345	0/0:3,0:17:28.51:0,29,82	0/0:16,0:16:41.85:0,42,328	0/0:18,0:18:41.90:0,42,340	0/1:15,1:17:3.05:3,0,169	0/0:21,0:21:59.91:0,60,489	0/0:11,0:11:26.95:0,27,220	1/1:3,9:12:27.07:288,27,0	1/1:4,14:18:35.96:384,36,0	1/1:0,10:10:21.05:224,21,0	0/0:23,0:25:69.99:0,70,554	0/0:26,0:26:56.18:0,56,436	0/0:19,0:19:50.93:0,51,419	0/0:11,0:11:32.94:0,33,267
chr10	101173315	.	C	CT	8673.09	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-14.599;DP=586;FS=8.939;HRun=5;HaplotypeScore=56.4889;InbreedingCoeff=0.9993;MQ=86.89;MQ0=0;MQRankSum=-2.092;QD=32.85;ReadPosRankSum=1.008;VQSLOD=5.1187;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,105,1119	1/1:1,10:11:24.08:316,24,0	0/0:19,0:19:47.98:0,48,496	0/0:21,0:21:48.08:0,48,497	0/0:25,0:25:72.16:0,72,765	0/0:16,0:16:42.10:0,42,451	0/0:23,0:23:57.14:0,57,613	1/1:5,26:31:75.24:983,75,0	0/0:20,0:20:54.13:0,54,580	0/0:23,0:23:60.14:0,60,639	0/0:19,0:19:45.11:0,45,484	1/1:1,14:15:36.12:474,36,0	0/0:21,0:21:48.08:0,48,504	0/0:21,0:21:63.16:0,63,676	1/1:1,29:30:69.22:908,69,0	0/0:15,0:15:42.09:0,42,443	0/0:22,0:22:66.14:0,66,693	0/0:15,0:15:42.11:0,42,451	1/1:1,9:10:27.08:343,27,0	1/1:1,15:16:45.15:592,45,0	1/1:3,23:26:60.20:790,60,0	1/1:1,17:18:51.17:671,51,0	1/1:2,16:18:39.13:513,39,0	1/1:0,25:25:75.24:987,75,0	0/0:22,0:22:57.12:0,57,603	1/1:5,20:25:24.93:676,25,0	1/1:2,20:22:60.20:789,60,0	1/1:1,16:17:48.16:632,48,0
chr10	101173826	.	CT	C	3534.34	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=14.121;DP=860;FS=0.402;HRun=2;HaplotypeScore=112.6602;InbreedingCoeff=1.0000;MQ=86.56;MQ0=1;MQRankSum=-3.991;QD=31.28;ReadPosRankSum=2.747;VQSLOD=3.2953;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:99:0,138,2034	0/0:17,0:17:51.17:0,51,764	0/0:29,0:28:81.23:0,81,1149	0/0:39,0:39:99:0,108,1512	0/0:24,0:24:69.23:0,69,1034	0/0:29,0:29:87.27:0,87,1264	0/0:37,0:37:99:0,108,1564	0/0:29,0:29:84.28:0,84,1225	0/0:30,0:30:90.30:0,90,1344	0/0:34,0:34:93.31:0,93,1389	0/0:24,0:24:72.23:0,72,1047	1/1:4,34:38:42.30:1045,42,0	0/0:36,0:36:99:0,108,1580	0/0:38,0:38:99:0,114,1660	0/0:41,0:41:99:0,123,1817	0/0:36,0:36:99:0,102,1485	0/0:29,0:29:87.29:0,87,1298	0/0:24,0:24:72.20:0,72,1054	0/0:24,1:24:72.13:0,72,954	0/0:35,0:35:99:0,105,1574	0/0:42,0:42:99:0,126,1822	1/1:3,22:25:66.21:857,66,0	1/1:2,14:16:39.13:506,39,0	1/1:1,33:34:87.75:1127,88,0	0/0:14,0:14:42.14:0,42,630	0/0:32,0:32:96.32:0,96,1424	0/0:33,0:33:96.29:0,96,1405	0/0:22,0:22:63.21:0,63,939
chr10	101173918	.	TCAC	T	6204.68	PASS	AB=0.727;AC=27;AF=0.482;AN=56;BaseQRankSum=14.010;DP=762;FS=4.730;HRun=0;HaplotypeScore=132.1302;InbreedingCoeff=0.9210;MQ=55.15;MQ0=15;MQRankSum=-4.767;QD=16.68;ReadPosRankSum=-0.659;VQSLOD=4.5446;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,45:56:77.96:1105,78,0	1/1:4,5:9:14.98:183,15,0	0/0:36,0:18:17.94:0,18,215	0/0:40,0:22:17.27:0,17,207	0/0:10,0:10:18.04:0,18,325	0/0:26,0:26:57.20:0,57,1145	0/0:37,0:37:87.05:0,87,1589	1/1:15,11:26:32.94:391,33,0	0/0:29,0:29:78.27:0,78,1527	0/0:24,0:24:60.13:0,60,1093	0/0:12,0:12:21.04:0,21,417	1/1:10,0:28:50.61:360,51,0	0/0:34,0:34:72.68:0,73,1396	0/0:30,0:30:66.18:0,66,1221	1/1:13,14:27:48.15:647,48,0	0/0:30,0:29:69.24:0,69,1360	0/0:40,0:40:98.66:0,99,1849	0/0:23,0:23:66.14:0,66,1203	1/1:18,4:22:19.44:341,19,0	1/1:8,7:15:26.97:337,27,0	1/1:11,35:45:50.39:572,50,0	1/1:5,0:18:20.67:137,21,0	1/1:4,0:29:41.59:287,42,0	1/1:15,0:26:11.81:76,12,0	0/0:19,0:19:48.14:0,48,888	0/1:15,9:24:11.31:553,0,11	1/1:9,19:28:56.92:703,57,0	1/1:3,14:17:36.12:513,36,0
chr10	101173985	.	GGGTGTGTGCA	G	10562.13	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=9.359;DP=651;FS=0.785;HRun=0;HaplotypeScore=231.8318;InbreedingCoeff=0.9698;MQ=71.21;MQ0=0;MQRankSum=-13.697;QD=58.68;ReadPosRankSum=-0.833;VQSLOD=4.0060;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,108,5039	1/1:2,5:7:18.02:487,18,0	0/0:34,0:34:63.17:0,63,2257	0/0:13,0:12:6.76:0,7,936	0/0:24,0:24:66.21:0,66,3258	0/0:20,0:20:51.18:0,51,2514	0/0:35,0:35:81.23:0,81,3555	1/1:8,23:31:68.93:1631,69,0	0/0:27,0:27:72.22:0,72,3232	0/0:26,0:26:63.21:0,63,3111	0/0:14,0:14:39.13:0,39,1879	0/0:23,0:23:60.08:0,60,2398	0/0:23,0:23:60.19:0,60,2733	0/0:24,0:24:66.21:0,66,3230	1/1:2,26:28:57.20:1772,57,0	0/0:29,0:28:75.24:0,75,3411	0/0:26,0:26:66.20:0,66,3069	0/0:16,0:16:48.10:0,48,2088	1/1:6,9:15:14.11:871,14,0	1/1:3,12:15:36.11:1054,36,0	1/1:20,4:24:9.03:282,9,0	0/0:25,0:25:60.21:0,60,2755	0/0:18,0:18:18.06:0,18,825	0/0:25,0:25:49.05:0,49,2193	0/0:22,0:22:63.21:0,63,2973	1/1:4,25:29:81.17:2262,81,0	1/1:5,17:22:57.12:1639,57,0	1/1:4,5:9:18.06:564,18,0
chr10	101174310	.	CAT	C	560.59	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.692;DP=410;FS=2.253;HRun=0;HaplotypeScore=88.4225;InbreedingCoeff=0.7782;MQ=76.59;MQ0=5;MQRankSum=-3.058;QD=31.14;ReadPosRankSum=0.869;VQSLOD=5.5636;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:45.15:655,45,0	0/0:6,0:6:11.82:0,12,224	0/0:21,0:19:57.14:0,57,934	0/0:23,0:15:38.80:0,39,522	0/0:16,0:16:45.14:0,45,790	0/0:15,0:15:45.15:0,45,842	0/0:13,0:12:36.10:0,36,570	0/0:14,0:14:39.13:0,39,712	0/0:8,0:8:24.08:0,24,449	0/0:15,0:15:45.12:0,45,780	0/0:10,0:10:27.09:0,27,487	0/0:6,0:6:12.04:0,12,224	0/0:6,0:6:14.98:0,15,246	0/0:7,0:7:21.07:0,21,393	0/0:10,0:10:15.05:0,15,262	0/0:10,0:10:21.07:0,21,392	0/0:19,0:19:45.10:0,45,774	0/0:20,0:20:51.17:0,51,937	0/0:19,0:19:48.16:0,48,898	0/0:15,0:15:42.14:0,42,763	0/0:15,0:15:45.15:0,45,823	0/0:19,0:19:48.16:0,48,879	0/0:24,0:24:54.18:0,54,987	0/0:3,0:3:3.01:0,3,56	0/0:21,0:21:51.13:0,51,825	0/0:18,0:18:54.16:0,54,933	0/0:18,0:18:47.76:0,48,792	0/0:19,0:19:42.14:0,42,749
chr10	101174325	.	GGTGTGTGTGTGTGT	G	4151.33	PASS	AB=0.655;AC=27;AF=0.519;AN=52;BaseQRankSum=7.849;DP=413;FS=0.000;HRun=0;HaplotypeScore=156.0708;InbreedingCoeff=0.7513;MQ=62.22;MQ0=17;MQRankSum=-6.210;QD=20.86;ReadPosRankSum=1.830;VQSLOD=2.4261;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:19:6.01:74,6,0	1/1:1,4:6:9.03:332,9,0	./.	0/0:20,0:10:0:0,0,0	0/0:16,0:16:27.09:0,27,1346	0/0:18,0:20:24.08:0,24,1433	0/0:12,0:11:15.05:0,15,995	1/1:12,0:12:6.01:69,6,0	0/0:9,0:9:15.03:0,15,627	0/0:19,0:20:39.13:0,39,1851	0/0:12,0:11:15.05:0,15,611	1/1:2,0:5:6.02:195,6,0	0/0:8,0:11:21.54:0,22,952	0/0:11,0:10:18.06:0,18,813	1/1:3,6:9:1.68:339,2,0	1/1:5,0:11:9.03:293,9,0	0/0:23,0:22:45.14:0,45,2427	0/0:12,0:15:18.06:0,18,930	1/1:15,5:19:9.17:281,9,0	1/1:6,6:12:18.06:541,18,0	1/1:17,0:16:8.65:92,9,0	1/1:7,0:16:18.06:586,18,0	1/1:10,0:19:12.04:391,12,0	./.	0/0:9,0:19:33.11:0,33,1345	0/1:9,10:18:99:252,0,174	1/1:11,3:14:17.76:473,18,0	1/1:9,8:15:6.02:234,6,0
chr10	101175131	.	TA	T	3678.69	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.196;DP=781;FS=10.379;HRun=4;HaplotypeScore=109.6485;InbreedingCoeff=0.9992;MQ=93.54;MQ0=0;MQRankSum=-5.132;QD=31.71;ReadPosRankSum=4.731;VQSLOD=2.7982;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:75,0:75:99:0,223,2994	0/0:10,0:10:30.10:0,30,420	0/0:35,0:35:86.13:0,86,1207	0/0:34,0:34:86.25:0,86,1123	0/0:27,0:27:72.20:0,72,970	0/0:16,0:16:45.15:0,45,630	0/0:36,0:36:99:0,102,1412	0/0:38,0:38:99:0,105,1440	0/0:28,0:28:81.27:0,81,1134	0/0:29,0:29:87.28:0,87,1188	0/0:21,0:21:57.19:0,57,798	1/1:2,28:30:78.24:936,78,0	0/0:34,0:34:99:0,99,1382	0/0:24,0:24:69.23:0,69,962	0/0:34,0:34:99:0,102,1412	0/0:28,0:28:84.25:0,84,1142	0/0:21,0:21:57.19:0,57,797	0/0:14,0:14:36.09:0,36,483	0/0:24,0:24:72.17:0,72,913	0/0:26,0:26:75.25:0,75,1049	0/0:32,0:32:87.29:0,87,1217	1/1:0,24:24:69.08:801,69,0	1/1:1,23:24:60.18:720,60,0	1/1:0,38:38:99:1222,102,0	0/0:19,0:19:54.18:0,54,756	0/0:22,0:22:66.20:0,66,877	0/0:30,0:30:87.27:0,87,1181	0/0:8,0:8:24.08:0,24,332
chr10	101175367	.	C	CTG	4972.67	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.852;DP=770;FS=1.363;HRun=0;HaplotypeScore=135.9674;InbreedingCoeff=1.0000;MQ=94.01;MQ0=0;MQRankSum=-3.779;QD=49.73;ReadPosRankSum=1.544;VQSLOD=5.1816;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1675	0/0:15,0:15:45.15:0,45,688	0/0:39,0:39:99:0,107,1447	0/0:35,0:35:96.20:0,96,1308	0/0:32,0:32:96.29:0,96,1443	0/0:20,0:20:60.20:0,60,918	0/0:33,0:33:96.31:0,96,1448	0/0:23,0:23:66.22:0,66,1008	0/0:29,0:29:87.28:0,87,1308	0/0:23,0:23:69.22:0,69,1036	0/0:14,0:14:39.12:0,39,574	1/1:4,20:24:66.23:1271,66,0	0/0:31,0:31:90.27:0,90,1332	0/0:33,0:33:99:0,99,1471	0/0:22,0:22:66.22:0,66,1010	0/0:40,0:40:99:0,120,1794	0/0:27,0:27:78.23:0,78,1150	0/0:24,0:24:69.23:0,69,1056	0/0:22,0:22:63.20:0,63,942	0/0:23,0:23:63.21:0,63,963	0/0:40,0:40:99:0,114,1698	1/1:1,18:19:51.17:983,51,0	1/1:0,28:28:72.25:1387,72,0	1/1:1,28:29:69.24:1332,69,0	0/0:20,0:19:60.20:0,60,918	0/0:35,0:35:99:0,102,1544	0/0:38,0:38:99:0,111,1674	0/0:13,0:13:39.13:0,39,596
chr10	101175466	.	C	CT	14082.72	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=8.946;DP=760;FS=4.896;HRun=1;HaplotypeScore=99.9291;InbreedingCoeff=0.9916;MQ=82.14;MQ0=0;MQRankSum=-3.606;QD=39.01;ReadPosRankSum=0.135;VQSLOD=4.8725;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,41:43:99:1649,102,0	1/1:0,3:3:9.03:135,9,0	0/0:24,0:24:63.13:0,63,787	0/0:35,0:35:93.29:0,93,1181	0/0:28,0:27:84.26:0,84,1075	0/0:23,0:23:69.22:0,69,896	0/0:44,0:44:99:0,129,1645	1/1:2,36:38:99:1567,108,0	0/0:22,0:22:60.18:0,60,764	0/0:33,0:33:84.26:0,84,1079	0/0:19,0:19:54.18:0,54,701	1/1:2,24:26:65.99:988,66,0	0/0:28,0:28:84.27:0,84,1085	0/0:29,0:29:81.25:0,81,1037	1/1:0,31:31:75.25:1124,75,0	0/0:32,0:32:96.29:0,96,1228	0/0:45,0:45:99:0,129,1673	0/0:24,0:24:72.23:0,72,935	1/1:2,16:18:48.15:699,48,0	1/1:0,19:19:54.14:784,54,0	1/1:2,49:51:99:2068,138,0	1/1:1,18:19:51.17:764,51,0	1/1:0,16:16:42.14:629,42,0	1/1:1,29:30:78.26:1169,78,0	0/0:13,0:13:39.13:0,39,506	1/1:4,19:23:24.17:809,24,0	1/1:3,32:35:90.22:1292,90,0	1/1:0,9:9:27.09:405,27,0
chr10	101175710	.	AAAAAAC	A	2130.10	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=5.922;DP=550;FS=5.382;HRun=0;HaplotypeScore=152.0426;InbreedingCoeff=0.6227;MQ=66.57;MQ0=2;MQRankSum=-8.386;QD=19.02;ReadPosRankSum=-5.188;VQSLOD=1.8751;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:35.94:0,36,391	0/0:10,0:10:27.06:0,27,553	0/0:23,0:18:36.21:0,36,608	0/0:17,0:14:28.64:0,29,487	0/0:35,0:35:99:0,99,2799	0/0:16,0:16:45.15:0,45,1411	0/0:17,0:17:51.13:0,51,1415	0/0:20,0:20:33.93:0,34,985	0/0:25,0:25:59.75:0,60,1800	0/0:24,0:24:60.08:0,60,1591	0/0:19,0:19:54.13:0,54,1370	1/1:2,14:16:19.49:296,19,0	0/0:25,0:25:63.17:0,63,1710	0/0:20,0:20:54.15:0,54,1589	0/0:22,0:22:3.57:0,4,925	0/0:20,0:20:32.32:0,32,568	0/0:27,0:27:75.21:0,75,2143	0/0:15,0:15:42.05:0,42,1069	0/1:17,0:16:40.04:40,0,621	0/0:21,0:21:10.16:0,10,942	0/1:11,0:11:27.68:28,0,291	1/1:4,20:24:58.04:893,58,0	1/1:11,8:19:42:590,42,0	1/1:1,15:16:20.82:419,21,0	0/0:21,0:21:52.64:0,53,1290	0/0:28,0:28:65.55:0,66,1537	0/0:20,0:20:22.13:0,22,788	0/1:9,0:9:35.54:36,0,309
chr10	101175716	.	C	CAAA	5871.39	PASS	AB=0.963;AC=24;AF=0.429;AN=56;BaseQRankSum=1.949;DP=552;FS=6.752;HRun=10;HaplotypeScore=120.5215;InbreedingCoeff=0.6981;MQ=62.59;MQ0=2;MQRankSum=-6.131;QD=22.41;ReadPosRankSum=-5.645;VQSLOD=1.8349;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:23.86:0,24,103	1/1:2,6:9:18.06:331,18,0	0/0:21,0:16:26.01:0,26,266	0/0:14,0:11:18.86:0,19,192	0/0:31,0:33:90.11:0,90,1056	0/0:16,0:18:48.03:0,48,552	0/0:17,0:17:42.10:0,42,497	1/1:7,15:23:57.12:766,57,0	0/0:22,0:22:55.52:0,56,666	0/0:23,0:23:54.13:0,54,652	0/0:17,0:18:24.08:0,24,477	0/1:16,0:17:29.24:29,0,30	0/0:21,0:23:57.08:0,57,660	0/0:17,0:17:51.14:0,51,606	1/1:13,7:23:45.50:638,46,0	1/1:6,1:20:14.73:220,15,0	0/0:30,0:31:67.41:0,67,816	0/0:13,0:14:36:0,36,405	1/1:15,6:22:48.81:688,49,0	1/1:3,18:25:59.89:810,60,0	1/1:1,6:9:18.02:272,18,0	0/1:22,0:23:70.36:203,0,70	0/1:17,0:18:32.11:113,0,32	0/1:15,0:15:24.63:25,0,75	0/0:21,0:22:52.84:0,53,593	1/1:4,23:30:68.89:1120,69,0	1/1:13,5:18:26.40:459,26,0	1/1:2,6:9:12.49:197,12,0
chr10	101175726	.	AG	A	491.63	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.870;DP=549;FS=3.222;HRun=2;HaplotypeScore=115.2833;InbreedingCoeff=0.9546;MQ=60.77;MQ0=1;MQRankSum=-4.697;QD=13.29;ReadPosRankSum=-1.013;VQSLOD=2.5143;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,14:18:44.93:458,45,0	0/0:7,0:7:20.87:0,21,155	0/0:17,0:15:32.99:0,33,350	0/0:11,1:9:7.87:0,8,158	0/0:32,0:32:90.21:0,90,1187	0/0:22,0:22:59.55:0,60,731	0/0:18,0:18:51.10:0,51,616	0/0:24,0:24:67.59:0,68,591	0/0:22,0:22:56.72:0,57,740	0/0:23,0:23:66.20:0,66,851	0/0:17,0:17:37.44:0,37,561	0/0:18,0:18:23.67:0,24,167	0/0:20,1:21:46.29:0,46,687	0/0:19,0:19:54.15:0,54,704	0/0:19,0:19:45:0,45,438	1/1:17,1:18:26.13:155,26,0	0/0:34,0:34:99:0,99,1187	0/0:16,0:16:39.56:0,40,485	0/0:21,0:20:59.25:0,59,497	0/0:21,0:21:47.63:0,48,364	0/0:10,0:10:20.86:0,21,156	0/0:28,0:28:75.98:0,76,525	0/0:16,0:16:42.84:0,43,275	0/0:15,0:15:25.61:0,26,153	0/0:20,0:20:54.52:0,55,681	0/0:29,0:29:51.09:0,51,504	0/0:21,0:22:36.69:0,37,371	0/0:9,0:9:20.94:0,21,176
chr10	101175757	.	GTT	G	2061.10	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=4.764;DP=522;FS=5.476;HRun=5;HaplotypeScore=110.7784;InbreedingCoeff=0.9811;MQ=80.86;MQ0=0;MQRankSum=-5.835;QD=16.49;ReadPosRankSum=-3.807;VQSLOD=-0.1441;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:57.19:0,57,781	1/1:4,0:4:8.60:73,9,0	0/0:26,0:22:35.90:0,36,621	0/0:21,0:20:48.64:0,49,678	0/0:25,0:25:72.24:0,72,1265	0/0:21,0:21:57.20:0,57,1030	0/0:16,0:16:48.16:0,48,861	1/1:27,0:28:67.45:723,67,0	0/0:15,0:15:42.14:0,42,761	0/0:25,0:25:72.24:0,72,1289	0/0:20,0:20:60.18:0,60,1035	0/0:15,0:15:24.08:0,24,413	0/0:19,0:19:54.17:0,54,946	0/0:21,0:21:63.22:0,63,1146	1/1:15,0:16:25.73:181,26,0	0/0:18,0:18:39.11:0,39,657	0/0:33,0:33:99:0,99,1774	0/0:20,0:20:57.18:0,57,979	1/1:16,2:18:40.67:340,41,0	1/1:11,2:13:22.32:194,22,0	1/1:9,0:9:16.25:160,16,0	0/0:27,0:27:75.25:0,75,1221	0/0:18,0:18:48.12:0,48,776	0/0:13,0:13:27.09:0,27,425	0/0:22,0:22:60.15:0,60,1017	1/1:10,5:15:27.30:259,27,0	1/1:14,1:16:22.73:250,23,0	1/1:6,0:6:11.75:93,12,0
chr10	101175760	.	T	TC	884.04	PASS	AB=0.848;AC=16;AF=0.286;AN=56;BaseQRankSum=6.526;DP=523;FS=13.331;HRun=0;HaplotypeScore=107.8867;InbreedingCoeff=0.5376;MQ=83.17;MQ0=0;MQRankSum=-1.566;QD=6.27;ReadPosRankSum=-0.989;VQSLOD=2.6196;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:52.45:0,52,383	1/1:3,1:4:8.81:79,9,0	0/0:27,0:23:11.07:0,11,456	0/1:21,0:21:30.67:31,0,463	0/0:26,0:26:72.23:0,72,986	0/0:20,0:20:57.19:0,57,795	0/0:17,0:17:51.16:0,51,694	0/1:22,3:25:20.15:83,0,20	0/0:14,0:14:42.14:0,42,584	0/0:27,0:27:78.23:0,78,1020	0/0:20,0:20:60.17:0,60,805	0/0:16,0:16:27.04:0,27,260	0/0:19,0:19:54.17:0,54,736	0/0:21,0:21:63.21:0,63,879	1/1:5,11:16:15.53:247,16,0	0/0:17,0:17:39.07:0,39,488	0/0:33,0:33:99:0,99,1381	0/0:20,0:20:60.18:0,60,798	1/1:12,3:16:2.28:112,2,0	1/1:9,4:13:3.67:78,4,0	0/1:4,4:8:7.64:87,0,8	0/0:29,0:29:67.54:0,68,605	0/0:20,0:20:49.48:0,49,444	0/0:13,0:13:21.01:0,21,194	0/0:21,0:21:59.95:0,60,785	0/1:12,2:14:23.48:32,0,23	1/1:7,10:17:14.59:257,15,0	1/1:4,2:6:3.19:51,3,0
chr10	101175762	.	T	TC	1611.46	PASS	AB=0.964;AC=21;AF=0.375;AN=56;BaseQRankSum=6.099;DP=527;FS=17.817;HRun=8;HaplotypeScore=105.4661;InbreedingCoeff=0.7372;MQ=84.49;MQ0=0;MQRankSum=-2.837;QD=8.14;ReadPosRankSum=-3.338;VQSLOD=-0.1493;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,16:21:42.12:486,42,0	1/1:4,0:5:8.96:85,9,0	0/1:26,1:24:10.76:11,0,263	0/1:22,1:22:35.76:36,0,264	0/0:24,0:25:62.03:0,62,546	0/0:20,0:20:51.03:0,51,466	0/0:17,0:17:36:0,36,326	1/1:25,0:25:14.59:140,15,0	0/0:14,0:14:39.01:0,39,356	0/0:25,0:25:62.09:0,62,567	0/0:22,0:22:54.90:0,55,490	0/0:17,0:17:28.27:0,28,232	0/0:19,0:19:42.01:0,42,384	0/0:21,0:21:53.98:0,54,485	1/1:17,0:17:28.32:331,28,0	0/0:15,0:15:23.99:0,24,219	0/0:35,0:35:93.01:0,93,841	0/0:20,0:20:54.01:0,54,487	1/1:18,0:18:16.59:150,17,0	1/1:13,0:13:11.82:100,12,0	1/1:9,0:9:3.50:94,3,0	0/0:28,0:28:64.28:0,64,560	0/0:19,0:19:44.52:0,45,371	0/0:11,0:11:18.01:0,18,164	0/0:20,0:21:53.90:0,54,465	0/1:15,0:15:4.25:39,0,4	1/1:17,0:17:27.93:285,28,0	1/1:6,0:6:6:58,6,0
chr10	101175991	.	C	CT	16126.29	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=18.766;DP=785;FS=0.552;HRun=1;HaplotypeScore=118.0189;InbreedingCoeff=0.9991;MQ=81.35;MQ0=0;MQRankSum=-5.491;QD=38.86;ReadPosRankSum=1.825;VQSLOD=4.6165;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,61:63:99:2363,166,0	1/1:0,9:9:24.08:340,24,0	0/0:34,0:32:78.77:0,79,982	0/0:30,0:30:77.98:0,78,985	0/0:24,0:24:69.21:0,69,880	0/0:21,0:21:57.17:0,57,726	0/0:41,0:41:99:0,117,1517	1/1:0,28:28:84.27:1203,84,0	0/0:25,0:25:66.20:0,66,843	0/0:24,0:24:63.20:0,63,816	0/0:12,0:12:36.12:0,36,467	1/1:0,32:32:93.31:1354,93,0	0/0:29,0:29:84.27:0,84,1088	0/0:27,0:27:72.23:0,72,935	1/1:1,26:27:69.23:1002,69,0	1/1:2,29:31:75.21:1065,75,0	0/0:48,0:48:99:0,129,1624	0/0:25,0:25:72.19:0,72,915	1/1:1,16:17:51.15:715,51,0	1/1:1,21:22:60.16:849,60,0	1/1:2,30:32:87.29:1262,87,0	1/1:2,28:30:81.23:1152,81,0	1/1:4,18:22:60.20:872,60,0	1/1:2,42:44:99:1702,117,0	0/0:30,0:30:90.29:0,90,1168	1/1:3,24:27:75.18:1037,75,0	1/1:1,23:24:63.21:905,63,0	1/1:0,7:7:21.07:306,21,0
chr10	101175992	.	TA	T	3003.36	PASS	AB=0.964;AC=29;AF=0.518;AN=56;BaseQRankSum=21.782;DP=780;FS=3.892;HRun=1;HaplotypeScore=158.0923;InbreedingCoeff=0.9281;MQ=81.53;MQ0=0;MQRankSum=-4.348;QD=7.34;ReadPosRankSum=4.326;VQSLOD=1.2523;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:59,0:60:99:467,124,0	1/1:9,0:9:18.87:72,19,0	0/0:33,0:32:88.45:0,88,1357	0/0:32,0:32:87.27:0,87,1299	0/0:24,0:24:69.22:0,69,1079	0/0:21,0:21:60.18:0,60,913	0/0:40,0:40:99:0,117,1865	1/1:29,0:29:77.87:362,78,0	0/0:24,0:24:72.23:0,72,1122	0/0:24,0:24:69.22:0,69,1077	0/0:12,0:12:36.12:0,36,575	1/1:32,0:32:75.91:288,76,0	0/0:31,0:31:90.26:0,90,1385	0/0:26,0:26:78.27:0,78,1242	1/1:28,0:28:32.86:159,33,0	1/1:29,0:29:43.05:197,43,0	0/0:48,0:48:99:0,141,2239	0/0:24,0:24:72.25:0,72,1150	1/1:16,0:16:43.04:198,43,0	1/1:22,0:22:32.59:153,33,0	1/1:33,0:33:51.31:231,51,0	1/1:28,1:29:13.04:146,13,0	1/1:18,2:20:44.98:175,45,0	1/1:42,0:43:99:384,100,0	0/0:31,0:31:93.31:0,93,1465	0/1:26,1:27:10.97:178,0,11	1/1:25,0:25:29.30:158,29,0	1/1:7,0:7:17.55:65,18,0
chr10	101176096	.	T	TAC	1549.95	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=4.814;DP=868;FS=2.960;HRun=0;HaplotypeScore=142.7640;InbreedingCoeff=0.7074;MQ=63.66;MQ0=18;MQRankSum=2.795;QD=23.13;ReadPosRankSum=0.750;VQSLOD=4.0582;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,32:43:99:1644,102,0	0/0:12,0:12:36.12:0,36,462	0/0:61,0:32:55.88:0,56,727	0/0:85,0:43:79.87:0,80,932	0/0:25,0:25:66.19:0,66,820	0/0:17,0:17:39.13:0,39,501	0/0:36,0:36:72.36:0,72,896	0/0:41,0:40:99:0,99,1236	0/0:28,0:28:65.95:0,66,823	0/0:24,0:23:51.16:0,51,652	0/1:24,0:24:5.19:5,0,669	0/0:37,1:38:81.16:0,81,1005	0/0:27,0:27:63.65:0,64,782	0/0:30,0:30:75.16:0,75,914	0/0:36,0:36:72.22:0,72,912	0/0:26,0:26:53.86:0,54,694	0/0:35,0:35:81.24:0,81,1028	0/0:15,0:14:36.12:0,36,463	0/0:28,0:25:66.20:0,66,834	0/0:19,0:19:36.10:0,36,449	0/0:55,0:55:99:0,124,1556	0/0:20,0:20:30.10:0,30,386	0/0:19,0:19:33.09:0,33,424	0/0:41,0:41:93.26:0,93,1194	0/0:15,0:14:36.11:0,36,453	0/0:27,0:27:66.21:0,66,838	0/0:24,0:24:60.09:0,60,750	0/0:16,0:16:36.12:0,36,463
chr10	101176149	.	TACACACACACAC	T	4124.39	PASS	AB=0.747;AC=27;AF=0.500;AN=54;BaseQRankSum=6.929;DP=655;FS=5.124;HRun=0;HaplotypeScore=218.2443;InbreedingCoeff=0.6862;MQ=52.39;MQ0=17;MQRankSum=-4.796;QD=11.95;ReadPosRankSum=-0.473;VQSLOD=2.3957;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:31:12.34:80,0,12	1/1:8,1:10:9.02:212,9,0	0/0:36,0:14:6.02:0,6,89	./.	0/0:16,0:16:24.08:0,24,1095	0/0:22,0:22:45.13:0,45,2179	0/0:33,0:36:35.92:0,36,1669	1/1:23,9:30:26.93:348,27,0	0/0:27,0:28:45.15:0,45,2195	0/0:21,0:21:42.14:0,42,1731	0/0:16,0:16:24.08:0,24,840	1/1:17,13:29:14.63:516,15,0	0/0:21,0:21:42.14:0,42,1886	0/0:26,0:27:60.20:0,60,2693	1/1:9,15:24:21.06:706,21,0	1/1:12,0:29:18.96:266,19,0	0/0:21,0:21:45.15:0,45,1959	0/0:15,0:14:18.06:0,18,723	1/1:8,4:12:9.50:267,10,0	1/1:11,0:13:20.84:337,21,0	1/1:35,0:34:5.35:101,5,0	1/1:4,20:24:6.62:209,7,0	1/1:13,2:15:21.03:427,21,0	1/1:20,10:29:9.03:289,9,0	0/0:22,0:21:38.99:0,39,1541	0/1:17,10:28:99:172,0,161	0/1:9,8:17:14.62:97,0,15	1/1:12,0:12:3.72:97,4,0
chr10	101176396	.	A	AC	3927.69	PASS	AB=0.632;AC=16;AF=0.286;AN=56;BaseQRankSum=13.458;DP=482;FS=2.374;HRun=7;HaplotypeScore=80.5781;InbreedingCoeff=0.8266;MQ=83.04;MQ0=0;MQRankSum=-11.666;QD=27.47;ReadPosRankSum=-2.988;VQSLOD=3.0774;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:78.12:0,78,753	1/1:6,8:14:36.11:428,36,0	0/0:19,0:19:38.99:0,39,357	0/0:16,0:16:32.36:0,32,297	0/0:25,0:25:63.04:0,63,588	0/0:25,0:25:72.10:0,72,689	0/0:12,0:12:21.02:0,21,203	1/1:5,18:24:28.06:599,28,0	0/0:18,0:18:51.08:0,51,493	0/0:17,0:17:39.06:0,39,376	0/0:12,0:12:36.06:0,36,347	0/0:17,0:17:33.03:0,33,319	0/0:18,0:18:51.08:0,51,492	0/0:14,0:14:39.06:0,39,376	1/1:2,18:20:57.13:665,57,0	0/0:14,0:14:33.05:0,33,319	0/0:20,0:20:51.08:0,51,493	0/0:17,0:17:51.08:0,51,492	1/1:8,11:19:42.13:499,42,0	1/1:4,10:14:36.08:404,36,0	1/1:3,3:6:8.92:97,9,0	0/0:15,0:15:42.06:0,42,405	0/0:19,0:19:54.09:0,54,521	0/0:8,0:8:18.03:0,18,174	0/0:21,0:21:57.09:0,57,550	0/1:6,18:24:17.74:643,0,18	1/1:5,8:12:33.10:397,33,0	0/1:5,4:9:7.91:196,0,8
chr10	101176408	.	TC	T	4678.78	PASS	AB=0.579;AC=19;AF=0.339;AN=56;BaseQRankSum=13.734;DP=476;FS=0.792;HRun=3;HaplotypeScore=72.8262;InbreedingCoeff=0.9096;MQ=87.49;MQ0=0;MQRankSum=-9.329;QD=32.05;ReadPosRankSum=0.361;VQSLOD=4.7935;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.16:0,81,1075	1/1:4,9:13:33.10:407,33,0	0/0:19,0:19:55.99:0,56,751	0/0:23,0:23:59.95:0,60,741	0/0:25,0:25:66.22:0,66,949	0/0:23,0:23:63.21:0,63,906	0/0:10,0:10:30.10:0,30,425	1/1:3,21:24:66.18:792,66,0	0/0:20,0:20:57.19:0,57,813	0/0:17,0:17:48.12:0,48,669	0/0:15,0:15:45.15:0,45,646	0/0:12,0:12:36.12:0,36,518	0/0:19,0:19:54.05:0,54,765	0/0:16,0:16:48.16:0,48,691	1/1:2,20:22:60.17:720,60,0	1/1:0,13:13:36.11:446,36,0	0/0:21,0:21:63.17:0,63,849	0/0:19,0:19:57.19:0,57,815	1/1:3,13:16:45.13:543,45,0	1/1:3,11:14:42.11:503,42,0	1/1:2,2:4:8.97:77,9,0	0/0:15,0:15:45.15:0,45,647	0/0:20,0:20:60.12:0,60,818	0/0:8,0:8:21.07:0,21,302	0/0:19,0:19:54.18:0,54,777	0/1:6,16:22:69.47:561,0,69	1/1:3,8:11:30.09:370,30,0	1/1:1,6:7:21.07:260,21,0
chr10	101176612	.	C	CCA	570.64	PASS	AB=0.933;AC=16;AF=0.364;AN=44;BaseQRankSum=1.175;DP=454;FS=5.444;HRun=0;HaplotypeScore=80.1577;InbreedingCoeff=0.3062;MQ=66.89;MQ0=11;MQRankSum=0.858;QD=3.42;ReadPosRankSum=-0.743;VQSLOD=1.6209;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:26:5.99:66,6,0	0/0:6,0:6:5.68:0,6,41	./.	./.	./.	./.	0/0:23,0:26:17.71:0,18,173	./.	0/0:14,0:14:8.85:0,9,78	0/0:21,0:19:8.84:0,9,76	0/0:9,0:9:5.97:0,6,52	0/0:7,0:8:2.74:0,3,14	0/0:12,0:12:5.91:0,6,64	0/1:15,0:15:25.90:36,0,26	1/1:13,7:21:12.04:177,12,0	1/1:7,3:10:3:28,3,0	0/0:22,0:21:15.04:0,15,160	0/0:21,0:21:21.05:0,21,225	1/1:16,0:15:3.01:44,3,0	1/1:6,5:11:6.02:88,6,0	0/1:29,0:28:43.28:106,0,43	./.	0/0:10,0:15:3.31:0,3,15	0/0:12,0:19:6.46:0,6,29	0/0:19,0:18:8.83:0,9,84	0/1:10,0:12:32.41:48,0,32	1/1:13,3:15:6.02:88,6,0	0/1:6,4:9:35.31:35,0,37
chr10	101177559	.	CT	C	1381.54	PASS	AB=0.753;AC=19;AF=0.339;AN=56;BaseQRankSum=-4.102;DP=565;FS=3.232;HRun=14;HaplotypeScore=89.9212;InbreedingCoeff=0.3508;MQ=61.62;MQ0=3;MQRankSum=5.088;QD=4.92;ReadPosRankSum=1.855;VQSLOD=2.6502;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:33:64.10:0,64,344	0/1:6,6:12:13:67,0,13	0/0:11,0:8:0.44:0,0,31	0/0:13,0:11:11.19:0,11,72	0/0:17,0:21:26.17:0,26,366	0/1:15,4:19:0.14:0,0,258	0/0:14,0:14:26.84:0,27,216	0/1:21,12:37:84.49:144,0,84	0/0:10,3:13:6.40:0,6,192	0/0:24,0:24:53.69:0,54,450	0/1:15,5:21:42.72:43,0,188	0/0:9,0:19:26.19:0,26,151	0/0:19,0:19:9.54:0,10,204	0/0:18,1:19:12.36:0,12,233	1/1:12,16:29:30.38:197,30,0	0/0:13,0:21:44.91:0,45,253	0/1:29,4:34:46.17:46,0,291	0/0:22,1:22:6.49:0,6,273	1/1:8,6:16:5.88:165,6,0	1/1:8,9:18:25.78:170,26,0	1/1:4,6:10:8.87:62,9,0	0/0:7,0:10:17.61:0,18,108	0/0:8,0:14:20:0,20,105	0/0:9,0:26:25.44:0,25,132	0/1:18,6:25:52.70:53,0,304	0/1:7,13:20:14.05:205,0,14	1/1:9,16:25:17.31:251,17,0	1/1:4,8:13:3.82:157,4,0
chr10	101177949	.	G	GA	1097.18	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-9.239;DP=421;FS=6.919;HRun=7;HaplotypeScore=37.5429;InbreedingCoeff=0.9730;MQ=70.37;MQ0=0;MQRankSum=-0.413;QD=24.94;ReadPosRankSum=0.365;VQSLOD=3.3733;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:33.05:0,33,319	0/0:5,0:5:15.02:0,15,145	0/0:10,0:9:20.97:0,21,192	0/0:7,0:6:12.02:0,12,116	0/0:28,0:28:75.10:0,75,718	0/0:18,0:18:42.06:0,42,406	0/0:9,0:9:24.03:0,24,232	0/0:40,0:40:99:0,102,980	0/0:9,0:9:24.04:0,24,232	0/0:24,0:24:69.11:0,69,666	0/0:27,0:27:69.11:0,69,666	1/1:2,4:6:12.04:145,12,0	0/0:13,0:13:36.06:0,36,348	0/0:9,0:9:21.03:0,21,203	0/0:12,0:12:24.03:0,24,232	1/1:1,11:12:33.10:399,33,0	0/0:19,0:19:57.09:0,57,550	0/0:18,0:18:41.80:0,42,389	0/0:19,0:19:48.07:0,48,462	0/0:20,0:20:54.02:0,54,501	0/0:9,0:9:27.04:0,27,261	1/1:1,8:9:21.06:254,21,0	1/1:0,10:10:24.07:290,24,0	1/1:1,6:7:15.05:181,15,0	0/0:12,0:13:38.10:0,38,354	0/0:22,0:22:60.10:0,60,579	0/0:20,0:20:51.07:0,51,486	0/0:12,0:12:36.06:0,36,347
chr10	101179130	.	G	GA	4126.41	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.868;DP=570;FS=9.202;HRun=4;HaplotypeScore=55.2982;InbreedingCoeff=0.9682;MQ=72.75;MQ0=0;MQRankSum=0.878;QD=36.52;ReadPosRankSum=1.747;VQSLOD=3.7461;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:48.16:656,48,0	0/0:13,0:13:33.07:0,33,362	0/0:14,0:14:33.09:0,33,367	0/0:12,0:11:3.76:0,4,66	0/0:36,0:36:93.26:0,93,1054	0/0:31,0:31:93.25:0,93,1044	0/0:14,0:14:42.12:0,42,476	0/0:30,0:30:81.22:0,81,911	0/0:18,0:18:48.13:0,48,544	0/0:22,0:22:66.18:0,66,741	0/0:16,0:16:42.12:0,42,476	1/1:1,12:13:36.12:489,36,0	0/0:22,0:22:60.17:0,60,681	0/0:21,0:21:63.14:0,63,700	0/0:20,0:20:48.13:0,48,545	1/1:0,22:22:57.19:780,57,0	0/0:23,0:23:69.20:0,69,783	0/0:26,0:26:78.20:0,78,873	0/0:16,0:16:36.08:0,36,392	0/0:29,0:29:72.20:0,72,816	0/0:25,0:25:66.18:0,66,746	1/1:3,15:18:48.15:641,48,0	1/1:1,22:23:63.21:862,63,0	1/1:1,18:19:51.17:698,51,0	0/0:18,0:18:51.15:0,51,578	0/0:22,0:22:63.17:0,63,706	0/0:22,0:22:63.16:0,63,704	0/0:7,0:7:21.06:0,21,238
chr10	101180408	.	GA	G	557.48	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.965;DP=642;FS=1.755;HRun=6;HaplotypeScore=64.5793;InbreedingCoeff=0.9933;MQ=77.92;MQ0=0;MQRankSum=-3.550;QD=25.34;ReadPosRankSum=0.086;VQSLOD=3.7051;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:62.52:652,63,0	0/0:8,0:8:24.08:0,24,315	0/0:21,0:24:43.56:0,44,515	0/0:12,0:12:26.10:0,26,270	0/0:34,0:33:96.31:0,96,1262	0/0:20,0:20:57.19:0,57,750	0/0:10,0:10:22.89:0,23,281	0/0:29,0:29:72.20:0,72,917	0/0:11,0:11:33.09:0,33,420	0/0:35,0:35:99:0,99,1290	0/0:24,0:24:66.21:0,66,868	0/0:24,0:24:72.21:0,72,920	0/0:24,0:24:66.21:0,66,868	0/0:26,0:26:75.22:0,75,969	0/0:28,0:28:78.25:0,78,1014	0/0:19,0:19:54.18:0,54,710	0/0:26,0:26:75.23:0,75,972	0/0:26,0:26:78.25:0,78,1026	0/0:22,0:22:63.20:0,63,828	0/0:34,0:34:81.26:0,81,1053	0/0:12,0:12:30.10:0,30,394	0/0:28,0:28:72.23:0,72,947	0/0:24,0:24:63.20:0,63,815	0/0:15,0:15:45.15:0,45,592	0/0:23,0:23:69.21:0,69,893	0/0:30,0:30:90.27:0,90,1158	0/0:24,0:24:63.20:0,63,828	0/0:28,0:28:84.27:0,84,1105
chr10	101181800	.	CATATATATATATATATATAT	C	891.81	PASS	AC=2;AF=0.043;AN=46;BaseQRankSum=3.594;DP=162;FS=15.717;HRun=0;HaplotypeScore=77.6314;InbreedingCoeff=0.3442;MQ=79.10;MQ0=5;MQRankSum=-3.492;QD=81.07;ReadPosRankSum=1.192;VQSLOD=2.0840;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,9:11:18.06:980,18,0	./.	0/0:13,0:3:0.47:0,0,1	0/0:17,0:11:12.98:0,13,197	0/0:8,0:10:12.03:0,12,692	0/0:3,0:7:12.04:0,12,605	./.	0/0:16,0:16:33.10:0,33,1493	0/0:5,0:5:5.99:0,6,50	0/0:4,0:4:3.01:0,3,56	0/0:5,0:5:6.02:0,6,475	0/0:4,0:4:12.04:0,12,1040	0/0:3,0:3:6.02:0,6,445	./.	0/0:5,0:5:3:0,3,25	0/0:3,0:3:9.03:0,9,500	0/0:9,0:14:39.13:0,39,2791	0/0:3,0:2:3.01:0,3,181	0/0:4,0:4:9.03:0,9,541	0/0:1,0:1:3:0,3,25	./.	./.	0/0:9,0:9:21.07:0,21,1666	0/0:2,0:2:2.99:0,3,24	0/0:7,0:9:15.05:0,15,1243	0/0:4,0:4:9.02:0,9,433	0/0:4,0:4:6.02:0,6,349	0/0:4,0:4:12.04:0,12,765
chr10	101182593	.	CTG	C	1649.89	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.003;DP=603;FS=26.511;HRun=0;HaplotypeScore=112.3639;InbreedingCoeff=0.9223;MQ=77.06;MQ0=0;MQRankSum=-8.148;QD=27.05;ReadPosRankSum=-1.074;VQSLOD=2.1724;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.20:0,84,1416	0/0:3,0:3:9.03:0,9,168	0/0:17,0:17:45.14:0,45,809	0/0:11,0:11:18.06:0,18,292	0/0:38,0:38:99:0,114,1995	0/0:26,0:25:78.25:0,78,1419	0/0:23,0:23:69.24:0,69,1291	0/0:38,0:38:99:0,114,1894	0/0:19,0:19:54.14:0,54,908	0/0:33,0:33:99:0,99,1766	0/0:23,0:23:66.21:0,66,1202	1/1:1,22:23:51.17:745,51,0	0/0:26,0:26:75.24:0,75,1345	0/0:29,0:29:87.27:0,87,1549	0/0:17,0:17:45.14:0,45,811	0/0:15,0:15:45.14:0,45,804	0/0:24,0:24:60.21:0,60,1122	0/0:8,0:8:24.08:0,24,448	0/0:18,0:18:51.15:0,51,887	0/0:29,0:29:87.28:0,87,1581	0/0:16,0:16:48.16:0,48,878	1/1:3,9:12:26.98:330,27,0	1/1:1,21:22:48.16:702,48,0	1/1:3,1:4:2.99:24,3,0	0/0:21,0:21:63.20:0,63,1147	0/0:37,0:37:99:0,111,1986	0/0:34,0:34:99:0,102,1876	0/0:5,0:5:12.04:0,12,224
chr10	101182605	.	C	CTA	1719.48	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.010;DP=598;FS=8.859;HRun=0;HaplotypeScore=105.8449;InbreedingCoeff=0.9160;MQ=80.49;MQ0=0;MQRankSum=-6.620;QD=26.45;ReadPosRankSum=-1.516;VQSLOD=3.9602;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.20:0,69,863	0/0:3,0:3:6.02:0,6,76	0/0:17,0:16:36.11:0,36,453	0/0:17,0:16:21.76:0,22,246	0/0:37,0:37:99:0,102,1284	0/0:30,0:29:81.22:0,81,1002	0/0:23,0:23:48.14:0,48,596	0/0:38,0:38:84.27:0,84,1066	0/0:19,0:19:54.17:0,54,688	0/0:34,0:34:93.29:0,93,1173	0/0:22,0:22:51.16:0,51,648	1/1:7,18:25:42.14:701,42,0	0/0:27,0:28:78.08:0,78,969	0/0:27,0:27:72.23:0,72,916	0/0:15,0:15:33.10:0,33,420	0/0:14,0:14:39.12:0,39,497	0/0:21,0:21:54.15:0,54,666	0/0:5,0:5:12.04:0,12,153	0/0:13,0:13:33.09:0,33,401	0/0:29,0:29:78.25:0,78,992	0/0:18,0:18:39.11:0,39,482	1/1:3,8:11:21.07:351,21,0	1/1:4,21:25:45.11:721,45,0	1/1:1,3:4:6.02:100,6,0	0/0:21,0:21:54.17:0,54,688	0/0:35,0:35:96.31:0,96,1222	0/0:36,0:36:90.29:0,90,1145	0/0:5,0:5:9.03:0,9,115
chr10	101182973	.	AT	A	379.86	PASS	AB=0.909;AC=3;AF=0.054;AN=56;BaseQRankSum=5.907;DP=583;FS=0.000;HRun=9;HaplotypeScore=61.6660;InbreedingCoeff=0.5953;MQ=72.89;MQ0=0;MQRankSum=0.961;QD=12.66;ReadPosRankSum=-0.001;VQSLOD=3.0412;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:51.02:467,51,0	0/0:9,1:11:5.46:0,5,298	0/0:11,0:10:16.91:0,17,145	0/1:9,0:10:18.54:19,0,50	0/0:33,2:35:29.31:0,29,837	0/0:21,0:22:60.03:0,60,656	0/0:15,0:15:33.08:0,33,370	0/0:34,0:34:90.27:0,90,1039	0/0:12,0:12:30.08:0,30,338	0/0:33,2:35:32.31:0,32,872	0/0:24,0:25:62.98:0,63,691	0/0:26,0:26:66.17:0,66,743	0/0:26,0:26:75.21:0,75,850	0/0:16,0:16:45.12:0,45,508	0/0:23,0:23:60.17:0,60,685	0/0:2,0:14:31.40:0,31,167	0/0:16,0:16:42.10:0,42,464	0/0:16,0:16:36.10:0,36,412	0/0:13,0:13:30.09:0,30,346	0/0:28,1:29:47.66:0,48,773	0/0:16,0:17:41.92:0,42,443	0/0:21,0:21:60.18:0,60,691	0/0:27,0:27:72.21:0,72,830	0/0:15,0:15:39.10:0,39,439	0/0:19,0:19:54.16:0,54,622	0/0:28,0:28:72.21:0,72,831	0/0:33,0:32:87.26:0,87,1003	0/0:14,0:14:42.11:0,42,476
chr10	101183762	.	TA	T	1499.95	PASS	AB=0.867;AC=10;AF=0.179;AN=56;BaseQRankSum=9.475;DP=523;FS=0.000;HRun=9;HaplotypeScore=51.4099;InbreedingCoeff=0.8054;MQ=67.33;MQ0=0;MQRankSum=-0.908;QD=17.86;ReadPosRankSum=0.641;VQSLOD=3.4418;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.13:0,45,519	0/0:8,0:8:21.06:0,21,241	0/0:6,0:6:15.04:0,15,159	0/1:4,1:5:15.84:16,0,68	0/0:26,0:26:69.20:0,69,788	0/0:22,1:23:38.74:0,39,700	0/0:12,0:12:33.05:0,33,365	0/0:40,1:41:77.82:0,78,1132	0/0:15,0:15:36.11:0,36,415	0/0:19,0:19:51.15:0,51,589	0/0:30,0:30:81.24:0,81,935	1/1:0,18:18:51.03:467,51,0	0/0:15,0:15:42.11:0,42,475	0/0:16,0:16:48.14:0,48,554	0/0:18,0:18:42.11:0,42,473	0/0:16,0:16:42.12:0,42,485	0/0:21,1:22:35.71:0,36,655	0/0:10,0:10:30.09:0,30,346	0/0:28,0:28:75.15:0,75,822	0/0:25,0:26:78.06:0,78,880	0/1:8,1:9:0.39:0,0,250	1/1:2,19:21:51.01:467,51,0	1/1:2,12:14:33.02:302,33,0	1/1:0,17:17:45.02:412,45,0	0/0:16,0:16:45.13:0,45,519	0/0:26,0:26:75.21:0,75,856	0/0:37,0:37:99:0,105,1202	0/0:13,0:13:27.08:0,27,312
chr10	101184100	.	GAA	G	2870.60	PASS	AB=0.762;AC=12;AF=0.214;AN=56;BaseQRankSum=6.043;DP=719;FS=6.881;HRun=13;HaplotypeScore=99.2523;InbreedingCoeff=0.8094;MQ=68.08;MQ0=0;MQRankSum=-0.817;QD=13.41;ReadPosRankSum=6.893;VQSLOD=2.1781;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,36:45:69.57:831,70,0	0/0:8,0:8:15:0,15,166	0/1:15,0:14:3.68:4,0,118	0/0:15,0:14:15.65:0,16,149	0/0:16,1:20:18.44:0,18,472	0/0:24,0:28:67.01:0,67,806	0/0:21,0:23:50.64:0,51,682	0/0:32,0:35:83.21:0,83,1015	0/0:27,0:27:66.17:0,66,897	0/0:25,1:28:33.41:0,33,742	0/0:20,0:24:52.62:0,53,633	1/1:8,22:31:56.95:601,57,0	0/0:27,0:29:71.12:0,71,887	0/0:22,0:24:60.13:0,60,764	0/0:29,1:35:57.13:0,57,1052	0/1:3,3:34:20.87:21,0,131	0/0:30,0:32:77.16:0,77,978	0/0:9,0:11:27.05:0,27,321	0/0:30,0:34:85.21:0,85,1081	0/0:26,0:29:71.20:0,71,941	0/0:22,0:26:50.05:0,50,600	1/1:13,22:35:31.75:506,32,0	1/1:2,18:23:40.45:388,40,0	1/1:1,30:31:72.10:698,72,0	0/0:10,0:13:29.96:0,30,335	0/0:27,0:30:44.59:0,45,891	0/0:21,0:25:52.11:0,52,626	0/0:9,0:9:23.87:0,24,315
chr10	101185093	.	TA	T	383.38	PASS	AB=0.739;AC=21;AF=0.477;AN=44;BaseQRankSum=1.996;DP=102;FS=8.118;HRun=11;HaplotypeScore=13.6085;InbreedingCoeff=0.4396;MQ=46.32;MQ0=23;MQRankSum=-0.801;QD=9.58;ReadPosRankSum=-0.568;VQSLOD=0.2207;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:1,1:2:18.62:19,0,26	./.	0/1:2,1:2:16.80:18,0,17	0/0:6,0:2:5.93:0,6,46	0/0:6,0:3:9.02:0,9,96	0/1:3,1:4:15.61:16,0,55	0/0:2,0:2:6.02:0,6,64	1/1:3,3:3:8.99:74,9,0	1/1:2,0:1:2.96:19,3,0	0/0:7,0:7:21.05:0,21,224	0/0:2,0:2:6.02:0,6,64	./.	0/0:5,0:4:12.03:0,12,128	0/0:2,0:1:3.01:0,3,32	./.	1/1:2,2:2:5.99:49,6,0	0/0:9,0:6:18.05:0,18,192	0/0:10,0:8:15.04:0,15,160	1/1:2,2:2:5.99:49,6,0	1/1:0,2:2:5.99:49,6,0	1/1:0,1:1:3:25,3,0	./.	./.	./.	0/0:7,0:4:9.02:0,9,96	1/1:1,1:2:3:25,3,0	1/1:0,3:3:5.99:49,6,0	1/1:1,6:6:17.98:148,18,0
chr10	101186633	.	C	CTT	4598.87	PASS	AB=0.725;AC=27;AF=0.482;AN=56;BaseQRankSum=1.975;DP=698;FS=0.367;HRun=13;HaplotypeScore=119.0008;InbreedingCoeff=0.4212;MQ=72.55;MQ0=5;MQRankSum=0.645;QD=10.82;ReadPosRankSum=-4.762;VQSLOD=2.3881;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:34:35.12:318,35,0	1/1:2,8:10:14.98:181,15,0	0/1:17,0:17:40.95:41,0,41	0/0:13,0:11:2.56:0,3,11	0/0:21,0:22:7.89:0,8,217	0/0:18,0:20:4.18:0,4,314	0/0:26,0:28:53.21:0,53,442	1/1:11,15:33:30.28:478,30,0	0/0:14,0:16:11.08:0,11,246	0/0:27,0:32:55.68:0,56,434	0/1:11,0:16:18:18,0,89	0/1:12,0:27:62.12:62,0,65	0/0:25,0:27:23.20:0,23,296	0/0:24,0:25:29.15:0,29,245	1/1:4,17:24:33.75:355,34,0	1/1:11,10:23:10.56:335,11,0	0/0:34,0:36:49.25:0,49,468	0/0:23,0:25:41.12:0,41,335	0/1:8,3:16:8.54:198,0,9	1/1:5,20:28:26.17:442,26,0	0/1:9,16:29:9.63:363,0,10	0/1:10,0:25:59.88:63,0,60	0/1:12,0:20:18.58:121,0,19	1/1:16,3:39:2.02:362,2,0	0/0:25,0:28:47.27:0,47,403	1/1:8,18:30:42.79:511,43,0	1/1:13,22:38:20.87:467,21,0	1/1:2,10:9:21.07:285,21,0
chr10	101186824	.	GC	G	13225.56	PASS	AB=0.526;AC=29;AF=0.518;AN=56;BaseQRankSum=15.775;DP=720;FS=5.010;HRun=3;HaplotypeScore=95.5757;InbreedingCoeff=0.9374;MQ=85.29;MQ0=0;MQRankSum=-0.946;QD=33.06;ReadPosRankSum=1.328;VQSLOD=4.9980;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,52:52:99:1672,135,0	1/1:0,13:13:36.11:446,36,0	0/0:28,0:28:75.12:0,75,942	0/0:18,0:18:50.95:0,51,671	0/0:30,0:30:87.28:0,87,1234	0/0:23,0:23:63.19:0,63,871	0/0:20,0:20:60.18:0,60,844	1/1:0,35:35:99:1254,105,0	0/0:27,0:27:78.21:0,78,1079	0/0:21,0:21:63.21:0,63,900	0/0:21,0:21:63.19:0,63,872	1/1:1,22:23:63.20:780,63,0	0/0:28,0:28:84.23:0,84,1150	0/0:32,0:32:96.32:0,96,1381	1/1:0,29:29:78.16:945,78,0	0/1:3,27:30:8.13:812,0,8	0/0:32,0:32:93.30:0,93,1319	0/0:24,0:24:66.19:0,66,924	1/1:0,30:30:90.25:1079,90,0	1/1:1,19:20:54.17:664,54,0	1/1:1,27:28:72.23:892,72,0	1/1:0,25:25:72.23:891,72,0	1/1:0,20:20:51.16:632,51,0	1/1:1,29:30:75.24:929,75,0	0/0:16,0:16:48.16:0,48,691	1/1:0,33:33:99:1190,99,0	1/1:1,22:23:63.20:780,63,0	1/1:1,8:9:21.07:260,21,0
chr10	101187015	.	C	CTT	4512.61	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=14.029;DP=558;FS=14.445;HRun=5;HaplotypeScore=115.8346;InbreedingCoeff=0.9949;MQ=65.10;MQ0=4;MQRankSum=-3.762;QD=15.56;ReadPosRankSum=2.555;VQSLOD=1.4193;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,4:29:49.70:396,50,0	1/1:8,0:8:17.85:129,18,0	0/0:15,0:11:32.95:0,33,411	0/0:14,0:11:15.43:0,15,271	0/0:24,0:23:65.88:0,66,953	0/0:19,0:19:48.53:0,49,696	0/0:15,0:15:38.34:0,38,502	1/1:30,1:29:65.99:582,66,0	0/0:16,0:16:46.92:0,47,684	0/0:20,0:20:54.09:0,54,804	0/0:15,0:15:41.35:0,41,596	1/1:14,0:14:25.22:216,25,0	0/0:20,0:20:57.12:0,57,780	0/0:26,0:26:77.78:0,78,984	1/1:26,0:26:46.92:343,47,0	1/1:18,0:19:28.73:247,29,0	0/0:28,0:29:85.85:0,86,1171	0/0:32,0:32:86.31:0,86,1181	1/1:28,0:28:51.87:411,52,0	1/1:27,0:26:50.26:427,50,0	1/1:15,0:15:25.80:207,26,0	1/1:17,0:16:38.41:311,38,0	1/1:21,0:20:38.84:305,39,0	1/1:14,0:14:25.61:206,26,0	0/0:21,0:21:60.20:0,60,929	1/1:16,0:16:33.16:301,33,0	1/1:17,0:17:38.35:298,38,0	1/1:7,0:7:17.89:133,18,0
chr10	101187017	.	T	TTTTTC	2917.14	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=12.779;DP=560;FS=4.177;HRun=0;HaplotypeScore=154.0028;InbreedingCoeff=0.9039;MQ=63.08;MQ0=4;MQRankSum=-3.613;QD=10.24;ReadPosRankSum=2.729;VQSLOD=2.5380;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:39.28:39,0,116	1/1:8,0:8:16.33:69,16,0	0/0:13,0:9:17.99:0,18,188	0/0:15,0:11:19.91:0,20,218	0/0:26,0:25:60.13:0,60,921	0/0:18,0:18:26.95:0,27,586	0/0:18,0:18:39.15:0,39,673	1/1:30,0:28:50.95:326,51,0	0/0:16,0:16:42.09:0,42,649	0/0:22,0:22:51.99:0,52,839	0/0:16,0:16:43.93:0,44,672	1/1:14,0:14:20.94:103,21,0	0/0:22,0:22:49.96:0,50,737	0/0:24,0:24:54.56:0,55,1028	1/1:25,0:25:36.46:161,36,0	1/1:8,13:20:8.33:828,8,0	0/0:29,0:29:54.76:0,55,1038	0/0:33,0:32:85.71:0,86,1241	1/1:28,0:28:66.56:408,67,0	1/1:25,0:24:48.50:226,49,0	1/1:15,0:15:10.03:141,10,0	1/1:18,0:17:38.65:201,39,0	1/1:21,0:20:35.20:147,35,0	1/1:13,0:13:13.59:78,14,0	0/0:23,0:23:43.75:0,44,833	1/1:15,0:15:32.15:222,32,0	1/1:16,0:16:30.63:125,31,0	1/1:7,0:7:16.33:69,16,0
chr10	101187019	.	T	TTTC	4749.45	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=12.866;DP=569;FS=17.391;HRun=0;HaplotypeScore=128.5712;InbreedingCoeff=0.8496;MQ=61.87;MQ0=4;MQRankSum=-5.661;QD=15.99;ReadPosRankSum=5.273;VQSLOD=3.4492;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:97.57:98,0,160	1/1:9,0:9:17.93:140,18,0	0/0:12,0:8:17.98:0,18,178	0/0:15,0:11:19.92:0,20,201	0/0:26,0:25:66.07:0,66,860	0/0:18,0:18:41.60:0,42,543	0/0:19,0:19:53.71:0,54,718	1/1:31,2:31:71.89:639,72,0	0/0:16,0:16:42.11:0,42,599	0/0:21,0:21:60.02:0,60,794	0/0:16,0:16:46.85:0,47,620	1/1:15,0:15:28.97:225,29,0	0/0:22,0:22:57.08:0,57,751	0/0:24,0:24:72.18:0,72,1030	1/1:26,0:26:47:342,47,0	0/1:21,0:20:17.42:422,0,17	0/0:29,0:29:78.92:0,79,974	0/0:32,0:31:87.15:0,87,1157	1/1:28,0:28:70.57:582,71,0	1/1:23,1:23:53.68:446,54,0	1/1:15,0:15:11.82:226,12,0	1/1:16,2:17:41.83:390,42,0	1/1:23,0:22:38.87:301,39,0	1/1:13,0:13:27.98:196,28,0	0/0:22,0:22:60.55:0,61,804	1/1:17,0:17:37.75:346,38,0	1/1:19,0:19:33.75:256,34,0	1/1:8,0:8:17.91:141,18,0
chr10	101187020	.	T	TTC	7803.49	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=9.032;DP=565;FS=21.645;HRun=0;HaplotypeScore=103.5173;InbreedingCoeff=0.8513;MQ=61.06;MQ0=4;MQRankSum=-4.784;QD=26.19;ReadPosRankSum=5.247;VQSLOD=4.1054;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:23.78:24,0,168	1/1:0,8:9:18.05:279,18,0	0/0:11,0:7:17.98:0,18,169	0/0:15,0:11:17.99:0,18,184	0/0:26,0:25:68.63:0,69,808	0/0:17,0:17:44.18:0,44,531	0/0:19,0:19:55.12:0,55,629	1/1:9,25:32:83.36:1084,83,0	0/0:14,0:14:42.11:0,42,548	0/0:21,0:21:63.07:0,63,766	0/0:17,0:17:46.79:0,47,569	1/1:2,13:15:26.80:383,27,0	0/0:22,0:22:56.99:0,57,684	0/0:24,0:24:72.19:0,72,946	1/1:3,23:26:50.32:688,50,0	0/1:21,0:20:13.86:241,0,14	0/0:28,0:28:80.64:0,81,898	0/0:32,0:31:87.06:0,87,1066	1/1:2,25:27:69.09:950,69,0	1/1:3,21:23:54.05:774,54,0	1/1:2,13:15:11.99:404,12,0	1/1:4,14:18:41.99:582,42,0	1/1:1,22:22:39.13:602,39,0	1/1:2,11:13:29.50:394,30,0	0/0:21,0:21:63:0,63,753	1/1:1,16:17:47.34:600,47,0	1/1:1,18:19:35.71:519,36,0	1/1:1,7:8:18.01:280,18,0
chr10	101187021	.	T	TC	2564.66	PASS	AB=0.990;AC=25;AF=0.446;AN=56;BaseQRankSum=14.268;DP=566;FS=19.834;HRun=0;HaplotypeScore=109.4009;InbreedingCoeff=0.8047;MQ=61.02;MQ0=4;MQRankSum=-3.829;QD=9.50;ReadPosRankSum=7.862;VQSLOD=1.9434;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:47.92:0,48,388	1/1:9,0:9:17.16:87,17,0	0/0:11,0:7:17.84:0,18,149	0/0:15,0:11:19.58:0,20,168	0/0:26,0:25:67:0,67,746	0/0:17,0:17:44.52:0,45,481	0/0:19,0:19:49.78:0,50,557	0/1:32,1:31:11.60:262,0,12	0/0:15,0:15:42.08:0,42,498	0/0:21,0:21:63.07:0,63,724	0/0:17,0:17:47.77:0,48,543	1/1:14,1:15:25.84:152,26,0	0/0:21,0:21:50.72:0,51,609	0/0:24,0:24:72.17:0,72,861	1/1:23,3:26:49.15:311,49,0	0/1:21,0:20:10.54:83,0,11	0/0:28,0:28:78.18:0,78,783	0/0:32,0:31:81.53:0,82,969	1/1:26,1:27:62.34:466,62,0	1/1:22,1:22:50.60:250,51,0	1/1:15,0:15:8.91:128,9,0	1/1:19,0:18:39.72:200,40,0	1/1:23,0:22:37.13:187,37,0	1/1:9,2:11:28.85:187,29,0	0/0:22,0:22:61.29:0,61,685	1/1:17,1:18:18.07:214,18,0	1/1:18,1:19:34.37:190,34,0	0/1:11,0:11:3.19:68,0,3
chr10	101187469	.	A	ATC	746.72	PASS	AB=0.953;AC=21;AF=0.457;AN=46;BaseQRankSum=6.229;DP=260;FS=0.715;HRun=0;HaplotypeScore=66.5825;InbreedingCoeff=0.2619;MQ=45.80;MQ0=28;MQRankSum=-2.745;QD=6.12;ReadPosRankSum=-5.130;VQSLOD=1.0780;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,6:11:0.89:2,1,0	1/1:3,5:8:6.02:86,6,0	./.	./.	0/0:15,0:14:8.93:0,9,435	0/0:25,0:24:66.22:0,66,1006	0/0:8,0:5:12.02:0,12,162	1/1:23,0:7:20.98:275,21,0	0/1:10,0:10:18.41:18,0,337	0/0:11,0:11:0.54:0,1,297	0/0:6,0:6:12.02:0,12,161	1/1:4,0:4:3.01:35,3,0	0/1:6,0:6:8.15:8,0,169	0/0:7,0:7:21.06:0,21,300	1/1:3,0:3:3.01:57,3,0	0/0:4,0:4:9.03:0,9,137	0/0:26,1:25:18.15:0,18,692	0/1:17,0:17:50.18:50,0,348	0/0:2,0:2:5.92:0,6,39	1/1:8,0:7:2.93:25,3,0	./.	./.	./.	1/1:0,3:3:2.94:18,3,0	0/0:12,0:12:6.85:0,7,332	0/1:8,2:7:44.58:140,0,45	0/1:13,1:14:59.45:127,0,59	1/1:2,1:2:3.01:54,3,0
chr10	101187511	.	A	ATC	447.18	PASS	AB=1.000;AC=9;AF=0.225;AN=40;BaseQRankSum=8.790;DP=318;FS=1.491;HRun=0;HaplotypeScore=100.9707;InbreedingCoeff=0.7376;MQ=43.38;MQ0=29;MQRankSum=-8.131;QD=6.88;ReadPosRankSum=-0.202;VQSLOD=2.9040;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:2,0:1:3.01:0,3,32	./.	0/0:15,0:14:36.09:0,36,501	0/0:25,0:24:63.69:0,64,965	0/0:8,0:4:5.75:0,6,58	0/0:31,0:14:24.79:0,25,240	0/0:9,0:9:27.09:0,27,398	0/0:19,0:19:54:0,54,765	0/0:10,0:10:24.08:0,24,364	0/0:12,0:12:3.48:0,3,12	0/0:4,0:4:12.04:0,12,176	0/0:10,0:10:27.08:0,27,392	./.	0/0:4,0:4:12.02:0,12,145	0/0:25,0:23:52.80:0,53,696	0/0:21,0:21:48.16:0,48,720	1/1:8,0:7:20.81:144,21,0	0/1:14,0:13:0:0,0,0	./.	./.	./.	./.	0/0:15,0:15:42.13:0,42,593	1/1:21,0:18:4.81:226,5,0	1/1:16,0:16:32.15:187,32,0	1/1:6,0:4:2.96:19,3,0
chr10	101187517	.	A	ATC	951.23	PASS	AB=0.916;AC=13;AF=0.325;AN=40;BaseQRankSum=10.100;DP=342;FS=6.040;HRun=0;HaplotypeScore=112.7012;InbreedingCoeff=0.5115;MQ=42.83;MQ0=24;MQRankSum=-9.885;QD=6.56;ReadPosRankSum=-1.301;VQSLOD=2.5071;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:3,0:2:5.79:0,6,38	./.	0/0:15,0:14:36.10:0,36,522	0/0:28,0:27:69.71:0,70,1054	0/0:7,0:6:8.76:0,9,102	0/1:33,2:19:99:150,0,293	0/0:9,0:9:24.08:0,24,355	0/0:20,0:20:60.20:0,60,906	0/0:10,0:10:21.07:0,21,321	1/1:1,11:12:6.02:111,6,0	0/0:6,0:6:15.05:0,15,220	0/0:10,0:10:27.09:0,27,413	./.	0/0:4,0:4:12.03:0,12,166	0/1:20,1:19:6.38:6,0,564	0/0:21,0:21:51.04:0,51,728	0/1:9,2:10:51.32:160,0,51	1/1:12,5:16:2.90:18,3,0	./.	./.	./.	./.	0/0:14,0:14:42.14:0,42,614	1/1:20,4:21:12.92:429,13,0	1/1:20,0:20:34.51:199,35,0	1/1:4,1:4:2.98:21,3,0
chr10	101187523	.	A	ATC	968.50	PASS	AB=0.958;AC=15;AF=0.341;AN=44;BaseQRankSum=10.639;DP=386;FS=11.999;HRun=0;HaplotypeScore=123.6908;InbreedingCoeff=0.4904;MQ=43.82;MQ0=21;MQRankSum=-8.311;QD=5.83;ReadPosRankSum=-2.280;VQSLOD=2.0786;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:5,0:5:2.60:10,3,0	0/0:6,0:5:14.97:0,15,159	0/0:4,0:2:3.01:0,3,37	0/0:16,0:15:39.12:0,39,558	0/0:32,0:31:75.71:0,76,1120	0/0:7,0:7:12.50:0,12,157	0/1:40,4:29:99:350,0,230	0/0:8,0:8:24.08:0,24,340	0/0:21,0:21:63.21:0,63,934	0/0:11,0:11:27.09:0,27,410	1/1:13,0:13:2.60:11,3,0	0/0:7,0:7:21.07:0,21,312	0/0:10,0:10:27.09:0,27,413	./.	0/0:5,0:5:12.04:0,12,177	0/1:22,0:21:12.69:13,0,539	0/0:22,0:22:24.45:0,24,727	0/1:12,0:11:52.93:145,0,53	1/1:16,2:17:2.70:12,3,0	./.	./.	./.	./.	0/0:18,0:18:54.04:0,54,706	1/1:23,1:22:15.57:344,16,0	1/1:21,1:22:42.22:219,42,0	1/1:5,0:4:2.80:13,3,0
chr10	101187527	.	CTA	C	1073.11	PASS	AB=0.909;AC=22;AF=0.440;AN=50;BaseQRankSum=10.631;DP=397;FS=12.778;HRun=0;HaplotypeScore=126.6645;InbreedingCoeff=0.3789;MQ=44.10;MQ0=20;MQRankSum=-5.727;QD=4.45;ReadPosRankSum=-2.103;VQSLOD=1.8057;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:11:6.11:0,6,18	1/1:5,0:5:2.90:16,3,0	0/0:6,0:5:14.08:0,14,212	0/0:3,0:2:2.12:0,2,39	0/0:15,0:14:34:0,34,572	0/0:29,0:28:72.24:0,72,1208	0/0:8,0:7:6.60:0,7,199	1/1:44,1:31:26.66:380,27,0	0/0:9,0:9:1.84:0,2,298	0/0:23,0:23:64.38:0,64,996	0/0:11,0:11:27.09:0,27,463	1/1:13,0:13:5.09:19,5,0	0/0:8,0:8:20.09:0,20,290	0/0:11,0:11:30.10:0,30,514	1/1:8,0:8:3.01:42,3,0	0/1:1,5:6:39.72:117,0,40	0/1:24,1:23:49.22:49,0,569	0/1:21,0:21:99:107,0,461	1/1:13,0:12:12.81:76,13,0	0/1:17,1:17:4.95:10,0,5	./.	./.	0/1:16,0:16:0.95:19,0,1	./.	0/1:18,0:18:30.36:30,0,660	1/1:24,0:22:22.31:173,22,0	1/1:24,0:24:19.11:165,19,0	1/1:5,0:4:4.56:40,5,0
chr10	101187529	.	A	ATC	2653.28	PASS	AB=1.000;AC=23;AF=0.479;AN=48;BaseQRankSum=8.921;DP=412;FS=15.825;HRun=0;HaplotypeScore=126.6042;InbreedingCoeff=0.5268;MQ=44.35;MQ0=20;MQRankSum=-6.873;QD=10.79;ReadPosRankSum=-3.343;VQSLOD=1.8012;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	./.	1/1:5,0:5:3.01:53,3,0	0/0:6,0:5:14.08:0,14,190	0/0:4,0:2:1.74:0,2,34	0/0:15,0:14:34.93:0,35,510	0/0:31,0:30:72.24:0,72,1087	0/0:9,0:8:8.27:0,8,199	1/1:43,4:33:38.49:958,38,0	0/0:9,0:9:3.15:0,3,321	0/0:22,0:22:66.14:0,66,933	0/0:11,0:11:27.09:0,27,413	1/1:13,1:14:6.02:100,6,0	0/0:9,0:9:24.05:0,24,312	0/0:11,0:11:30.10:0,30,458	1/1:6,2:8:3.01:42,3,0	0/0:6,0:6:7.67:0,8,58	0/1:24,0:22:92.61:93,0,540	0/1:23,0:23:99:106,0,426	1/1:14,1:14:27.70:374,28,0	1/1:17,3:19:5.90:43,6,0	./.	./.	1/1:13,3:16:2.99:24,3,0	./.	0/1:18,0:18:27.90:28,0,630	1/1:23,1:22:40.53:581,41,0	1/1:26,1:27:50.05:371,50,0	1/1:5,0:4:5.97:55,6,0
chr10	101187596	.	AC	A	8540.66	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=17.234;DP=484;FS=45.393;HRun=3;HaplotypeScore=110.0124;InbreedingCoeff=0.9906;MQ=76.61;MQ0=0;MQRankSum=-7.159;QD=33.36;ReadPosRankSum=1.602;VQSLOD=1.4994;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:42.14:545,42,0	1/1:0,11:11:30.10:383,30,0	0/0:12,0:12:36.12:0,36,525	0/0:12,0:12:33.06:0,33,451	0/0:18,0:18:51.16:0,51,744	0/0:23,0:23:69.23:0,69,1033	0/0:8,0:8:24.07:0,24,339	1/1:0,50:50:99:1844,150,0	0/0:10,0:10:30.10:0,30,450	0/0:25,0:25:75.25:0,75,1102	0/0:14,0:14:39.13:0,39,584	1/1:0,12:12:27.09:350,27,0	0/0:19,0:19:57.18:0,57,834	0/0:11,0:11:30.10:0,30,449	1/1:0,11:11:27.09:350,27,0	0/0:13,0:13:33.11:0,33,485	0/0:16,0:16:48.11:0,48,671	0/0:23,0:23:69.22:0,69,1012	1/1:0,10:10:30.10:389,30,0	1/1:0,28:28:63.20:811,63,0	1/1:0,12:12:27.09:350,27,0	1/1:0,13:13:30.10:389,30,0	1/1:0,24:24:54.13:682,54,0	1/1:0,6:6:9.03:117,9,0	0/0:24,0:24:72.24:0,72,1058	1/1:0,23:23:69.22:889,69,0	1/1:0,30:30:87.28:1129,87,0	1/1:0,9:9:24.08:312,24,0
chr10	101188098	.	TC	T	2664.64	PASS	AB=0.988;AC=16;AF=0.286;AN=56;BaseQRankSum=2.211;DP=567;FS=6.539;HRun=5;HaplotypeScore=91.4704;InbreedingCoeff=0.4619;MQ=78.43;MQ0=1;MQRankSum=-2.268;QD=12.34;ReadPosRankSum=-0.586;VQSLOD=1.8651;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:48.09:528,48,0	0/1:8,0:8:16.88:17,0,29	0/0:20,1:18:9.11:0,9,362	0/0:21,0:19:44.05:0,44,498	0/0:35,0:35:90.27:0,90,1167	0/0:33,0:33:96.29:0,96,1243	0/0:9,0:9:27.07:0,27,331	0/1:30,0:30:41.12:41,0,81	0/0:24,0:24:63.18:0,63,806	0/0:23,0:23:69.19:0,69,874	0/0:24,0:24:69.16:0,69,838	1/1:0,23:23:51.15:576,51,0	0/0:23,0:23:63.17:0,63,790	0/0:8,0:8:24.08:0,24,319	0/1:29,0:29:5.35:5,0,139	0/0:13,0:13:39.10:0,39,475	0/0:21,0:21:63.18:0,63,794	0/0:17,0:17:51.10:0,51,625	0/0:13,0:13:2.67:0,3,52	0/1:19,0:19:30.99:31,0,80	0/1:12,1:13:8.18:8,0,57	1/1:0,23:23:63.18:711,63,0	1/1:0,15:15:39.11:441,39,0	1/1:1,15:16:36.10:406,36,0	0/0:19,0:19:57.14:0,57,688	0/1:20,0:20:79.90:86,0,80	0/0:28,0:28:9.13:0,9,143	0/0:19,0:19:38.64:0,39,128
chr10	101188666	.	GT	G	110.71	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.021;DP=454;FS=0.000;HRun=8;HaplotypeScore=49.5206;InbreedingCoeff=0.8660;MQ=79.36;MQ0=0;MQRankSum=-0.096;QD=15.82;ReadPosRankSum=0.905;VQSLOD=3.2440;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:21.03:203,21,0	0/0:11,0:11:30.08:0,30,353	0/0:18,0:16:14.23:0,14,257	0/0:16,0:17:9.39:0,9,215	0/0:26,0:26:66.20:0,66,795	0/0:22,0:21:57.17:0,57,689	0/0:4,0:4:12.04:0,12,145	0/0:28,0:28:69.19:0,69,814	0/0:17,0:17:48.14:0,48,573	0/0:19,0:19:54.16:0,54,645	0/0:24,0:24:69.21:0,69,833	0/0:9,0:9:24.06:0,24,280	0/0:14,0:14:42.13:0,42,507	0/0:12,0:12:30.09:0,30,362	0/0:19,0:19:45.14:0,45,543	0/0:14,0:14:39.12:0,39,471	0/0:13,0:13:27.08:0,27,325	0/0:20,0:20:54.17:0,54,651	0/0:20,0:20:54.15:0,54,632	0/0:34,0:34:93.29:0,93,1123	0/0:6,0:6:18.06:0,18,217	0/0:6,0:6:15.05:0,15,180	0/0:13,0:13:27.08:0,27,326	0/0:5,0:5:15.05:0,15,181	0/0:14,0:14:36.10:0,36,424	0/0:19,0:19:51.16:0,51,616	0/0:26,0:26:75.20:0,75,891	0/0:17,0:17:51.16:0,51,616
chr10	101188765	.	AT	A	3697.72	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=10.647;DP=419;FS=0.841;HRun=8;HaplotypeScore=40.1385;InbreedingCoeff=0.9360;MQ=70.62;MQ0=0;MQRankSum=0.442;QD=23.70;ReadPosRankSum=0.121;VQSLOD=3.8117;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:30.05:0,30,336	1/1:3,4:7:12.01:116,12,0	0/0:3,0:3:3.01:0,3,32	0/0:8,0:8:9.95:0,10,83	0/0:27,0:27:75.22:0,75,896	0/0:13,0:12:33.09:0,33,389	0/0:6,0:6:12.04:0,12,145	1/1:5,31:36:93.08:883,93,0	0/0:14,0:14:39.12:0,39,471	0/0:15,0:15:39.11:0,39,463	0/0:25,0:25:72.21:0,72,860	0/0:9,0:9:24.07:0,24,290	0/0:19,0:19:45.14:0,45,544	0/0:13,0:13:30.08:0,30,352	1/1:1,12:13:30.05:290,30,0	0/0:10,0:10:27.07:0,27,316	0/0:17,0:17:48.12:0,48,565	0/0:20,0:20:54.14:0,54,628	1/1:3,16:19:48.07:464,48,0	1/1:4,25:29:69.03:649,69,0	1/1:1,2:3:6.01:58,6,0	0/0:10,0:10:30.08:0,30,352	0/0:15,0:15:42.12:0,42,496	0/0:7,0:7:18:0,18,200	0/0:19,0:19:57.17:0,57,689	1/1:3,21:24:29.86:572,30,0	1/1:1,18:19:51.08:493,51,0	1/1:0,6:6:18.03:174,18,0
chr10	101189527	.	T	TAA	3029.16	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=-5.330;DP=547;FS=5.516;HRun=9;HaplotypeScore=92.6216;InbreedingCoeff=0.6378;MQ=75.09;MQ0=1;MQRankSum=-1.311;QD=18.36;ReadPosRankSum=-3.597;VQSLOD=1.8260;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:25:30.22:791,30,0	0/0:5,0:5:14.95:0,15,117	0/0:9,0:9:15.01:0,15,153	0/0:11,0:11:14.16:0,14,139	0/0:16,0:16:45.11:0,45,479	0/0:20,0:20:54.10:0,54,567	0/0:19,0:19:51.07:0,51,531	0/0:31,0:31:22.44:0,22,337	0/0:24,0:24:60.13:0,60,638	0/0:31,0:32:78.13:0,78,822	0/0:14,0:14:36.07:0,36,375	1/1:4,14:19:47.32:666,47,0	0/0:13,0:14:41.84:0,42,427	0/0:31,0:31:81.15:0,81,846	0/0:19,0:19:46.76:0,47,344	0/0:24,0:24:63.14:0,63,671	0/0:14,0:14:33.03:0,33,335	0/0:24,0:23:59.94:0,60,638	0/1:10,0:10:8.24:8,0,103	0/1:24,0:24:7.61:8,0,332	0/0:17,0:17:16.75:0,17,279	1/1:3,17:21:51.16:755,51,0	1/1:2,22:25:44.74:675,45,0	1/1:2,8:10:18.06:277,18,0	0/0:27,0:27:78.19:0,78,827	0/1:23,0:23:9.16:9,0,302	0/0:31,0:31:71.25:0,71,542	0/1:8,0:8:23.66:24,0,104
chr10	101189738	.	TTC	T	425.99	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=4.886;DP=448;FS=0.824;HRun=0;HaplotypeScore=76.0414;InbreedingCoeff=0.7310;MQ=68.98;MQ0=19;MQRankSum=-4.277;QD=6.98;ReadPosRankSum=-2.580;VQSLOD=2.4347;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:21.04:0,21,265	0/0:7,0:7:11.87:0,12,153	0/0:32,0:18:34.38:0,34,448	0/0:42,0:17:27.55:0,28,288	0/0:24,0:24:57.42:0,57,977	0/0:27,0:27:57.04:0,57,838	0/0:10,0:9:18.04:0,18,261	0/0:18,0:18:36.12:0,36,557	0/0:9,0:9:15.05:0,15,241	0/0:18,0:18:36.12:0,36,575	0/0:16,0:16:7.72:0,8,591	1/1:9,6:15:23.91:219,24,0	0/1:14,0:14:7.58:8,0,368	0/0:9,0:9:21.04:0,21,313	0/0:16,0:16:29.46:0,29,336	0/0:23,0:23:51.03:0,51,747	0/0:21,0:21:45.15:0,45,709	0/0:8,0:6:15.05:0,15,245	0/0:12,0:12:14.80:0,15,142	0/0:12,0:12:29.76:0,30,369	0/0:12,0:11:23.47:0,23,260	1/1:5,1:6:11.95:112,12,0	1/1:6,1:7:11.95:114,12,0	1/1:3,6:8:11.99:124,12,0	0/0:15,0:15:37.69:0,38,541	0/0:19,0:19:49.36:0,49,550	0/0:21,0:20:38.18:0,38,443	0/1:10,0:9:6.10:6,0,269
chr10	101189753	.	TTTCTCTCTC	T	527.73	PASS	AB=0.944;AC=9;AF=0.161;AN=56;BaseQRankSum=6.336;DP=462;FS=15.476;HRun=0;HaplotypeScore=136.8131;InbreedingCoeff=-0.0262;MQ=52.08;MQ0=27;MQRankSum=0.018;QD=4.29;ReadPosRankSum=5.208;VQSLOD=1.5241;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:13.33:0,13,149	0/0:5,0:5:10.58:0,11,128	0/0:24,0:11:30.05:0,30,356	0/0:35,0:10:26.63:0,27,262	0/0:26,0:26:67.16:0,67,1619	0/0:25,0:25:56.87:0,57,1423	0/0:12,0:10:18.74:0,19,236	0/0:16,0:13:19.39:0,19,507	0/0:10,0:10:20.20:0,20,491	0/0:20,0:19:57.15:0,57,1507	0/0:19,0:19:45.32:0,45,1238	0/1:12,6:18:69:184,0,69	0/0:15,0:15:34.88:0,35,1078	0/0:12,0:12:30.97:0,31,991	0/1:15,0:15:99:112,0,101	0/0:24,0:24:57.65:0,58,1590	0/0:24,0:24:66.64:0,67,2209	0/0:10,0:8:24.08:0,24,847	0/1:8,0:8:42.66:43,0,156	0/1:14,0:13:20.08:20,0,171	0/1:12,0:11:43.07:43,0,200	0/0:6,1:7:6.86:0,7,45	0/1:8,2:10:0.15:13,0,0	0/1:9,1:9:1.86:69,0,2	0/0:25,0:24:43.95:0,44,1234	0/1:18,0:18:99:102,0,373	0/1:18,0:16:80.51:81,0,351	0/0:10,0:9:3.20:0,3,222
chr10	101189775	.	TCTCTCTCTCACA	T	2029.10	PASS	AB=1.000;AC=20;AF=0.385;AN=52;BaseQRankSum=0.925;DP=399;FS=6.002;HRun=0;HaplotypeScore=148.7470;InbreedingCoeff=0.1018;MQ=45.56;MQ0=22;MQRankSum=1.628;QD=10.35;ReadPosRankSum=-1.891;VQSLOD=1.3132;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:9.03:0,9,152	0/1:2,0:2:31.29:31,0,71	./.	./.	0/0:15,0:15:34.03:0,34,1017	0/1:19,0:19:0.56:1,0,1019	0/0:14,0:11:12.97:0,13,200	0/1:20,0:15:99:117,0,141	0/0:14,0:14:18.06:0,18,520	0/0:22,0:21:55.76:0,56,1568	0/0:15,0:15:34.01:0,34,998	1/1:17,1:18:23.32:482,23,0	0/0:16,0:16:39.63:0,40,872	0/0:12,0:12:23.19:0,23,1081	0/1:19,0:19:31.94:263,0,32	0/1:21,0:21:37.25:37,0,972	0/0:25,0:25:66.36:0,66,1839	0/0:11,0:9:27.09:0,27,743	0/1:8,0:8:40.31:157,0,40	0/1:12,0:11:99:115,0,103	0/1:11,0:9:99:205,0,110	1/1:6,1:7:6:52,6,0	1/1:2,8:10:3.90:38,4,0	1/1:10,1:10:8.98:210,9,0	0/0:26,0:25:41.21:0,41,1289	0/1:19,0:19:99:275,0,457	0/1:16,0:14:99:206,0,376	1/1:3,0:3:1.14:4,1,0
chr10	101189783	.	TCACA	T	524.94	PASS	AB=0.955;AC=10;AF=0.185;AN=54;BaseQRankSum=3.230;DP=406;FS=0.000;HRun=0;HaplotypeScore=110.6541;InbreedingCoeff=0.4820;MQ=44.57;MQ0=18;MQRankSum=1.495;QD=6.10;ReadPosRankSum=-0.369;VQSLOD=1.5904;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:12.04:0,12,192	0/0:5,0:5:3.01:0,3,64	0/0:4,0:2:4.15:0,4,19	./.	0/0:13,0:13:9.03:0,9,150	0/0:19,0:19:18.43:0,18,301	0/0:14,0:11:11.98:0,12,171	0/0:21,0:16:20.90:0,21,246	0/0:14,0:14:11.92:0,12,220	0/0:26,0:25:41.86:0,42,550	0/0:14,0:14:14.63:0,15,231	1/1:21,0:20:22.53:288,23,0	0/1:17,0:17:22.71:23,0,161	0/0:12,0:12:20.12:0,20,394	0/0:16,0:16:7.02:0,7,69	0/1:18,1:20:19.07:207,0,19	0/0:22,0:22:21:0,21,347	0/0:10,0:10:11.96:0,12,141	0/0:12,0:12:9.86:0,10,91	0/0:14,0:13:6.02:0,6,105	0/0:13,0:12:12.04:0,12,201	1/1:3,5:8:6:52,6,0	1/1:10,0:10:3.01:34,3,0	1/1:10,0:9:6.01:66,6,0	0/0:24,0:24:23.25:0,23,403	0/0:19,0:19:42.04:0,42,555	0/0:16,0:14:22.62:0,23,321	0/0:3,0:3:2.68:0,3,12
chr10	101190319	.	CTTT	C	5741.12	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=15.372;DP=539;FS=0.732;HRun=14;HaplotypeScore=125.0227;InbreedingCoeff=0.9797;MQ=64.97;MQ0=2;MQRankSum=-4.132;QD=20.50;ReadPosRankSum=6.823;VQSLOD=3.3209;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:26:48.72:210,49,0	1/1:0,6:6:15.01:175,15,0	0/0:21,0:13:24.02:0,24,330	0/0:14,0:14:25.68:0,26,325	0/0:31,0:33:84.23:0,84,1361	0/0:16,0:17:45.12:0,45,750	0/0:2,0:8:9.03:0,9,125	1/1:6,21:27:62.31:711,62,0	0/0:20,0:20:57.18:0,57,956	0/0:17,0:18:48.11:0,48,707	0/0:22,0:28:75.22:0,75,1237	1/1:2,0:14:30.52:122,31,0	0/0:14,0:14:30.08:0,30,479	0/0:20,0:22:51.17:0,51,877	1/1:4,18:22:47.75:560,48,0	0/0:13,0:15:45.11:0,45,748	0/0:14,0:16:42.09:0,42,679	0/0:12,0:15:33.52:0,34,463	1/1:7,17:24:53.34:628,53,0	1/1:4,28:32:77.92:910,78,0	1/1:2,23:25:56.96:666,57,0	1/1:3,0:14:27.62:113,28,0	1/1:5,0:22:35.76:149,36,0	1/1:0,0:13:20.78:86,21,0	0/0:17,0:17:48.10:0,48,712	1/1:6,18:24:8.69:571,9,0	1/1:3,19:22:47.81:560,48,0	1/1:1,8:9:24.07:280,24,0
chr10	101190467	.	ACTCTT	A	8900.82	PASS	AB=0.513;AC=17;AF=0.304;AN=56;BaseQRankSum=11.390;DP=518;FS=9.465;HRun=0;HaplotypeScore=112.3937;InbreedingCoeff=0.9137;MQ=76.99;MQ0=0;MQRankSum=-13.011;QD=51.15;ReadPosRankSum=-2.279;VQSLOD=4.5016;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.19:0,54,1660	1/1:1,10:11:30.10:622,30,0	0/0:13,0:13:33.10:0,33,835	0/0:18,0:18:45.15:0,45,1228	0/0:19,0:19:54.19:0,54,1634	0/0:23,0:23:60.21:0,60,1774	0/0:22,0:22:63.22:0,63,1935	1/1:6,34:40:99:1886,102,0	0/0:19,0:19:57.20:0,57,1752	0/0:13,0:13:39.13:0,39,1189	0/0:20,0:20:57.20:0,57,1665	0/0:15,0:15:42.14:0,42,1289	0/0:15,0:15:45.14:0,45,1274	0/0:16,0:16:45.15:0,45,1382	1/1:0,17:17:45.15:932,45,0	0/0:19,0:19:57.20:0,57,1640	0/0:24,0:24:69.24:0,69,2121	0/0:18,0:18:45.15:0,45,1382	1/1:1,14:15:39.09:717,39,0	1/1:3,23:26:66.18:1312,66,0	1/1:1,10:11:24.04:454,24,0	0/0:19,0:19:54.19:0,54,1642	0/0:22,0:22:63.17:0,63,1805	0/0:19,0:19:57.20:0,57,1725	0/0:11,0:11:30.10:0,30,917	0/1:1,19:20:32.07:1116,0,32	1/1:0,27:25:72.25:1490,72,0	1/1:1,6:7:18.06:373,18,0
chr10	101190537	.	GAAA	G	2001.59	PASS	AB=0.678;AC=18;AF=0.321;AN=56;BaseQRankSum=5.250;DP=552;FS=9.199;HRun=16;HaplotypeScore=113.7024;InbreedingCoeff=0.4264;MQ=73.16;MQ0=0;MQRankSum=-2.490;QD=9.76;ReadPosRankSum=4.013;VQSLOD=0.1141;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:32:34.67:0,35,208	1/1:2,3:5:5.91:65,6,0	0/0:15,0:11:4.99:0,5,25	0/0:18,0:14:8.62:0,9,106	0/0:17,0:30:72.17:0,72,1000	0/0:17,0:19:48.12:0,48,742	0/0:16,0:20:54.14:0,54,853	1/1:15,14:33:21.01:415,21,0	0/0:18,0:21:51.12:0,51,770	0/0:19,0:19:36.08:0,36,524	0/0:25,0:24:53.21:0,53,829	0/0:9,0:18:7.66:0,8,147	0/0:27,0:29:70.37:0,70,1013	0/0:25,0:25:66.22:0,66,1095	1/1:9,8:18:7.32:238,7,0	0/0:11,0:17:44.96:0,45,419	0/0:18,0:17:51.16:0,51,824	0/0:6,0:21:15.03:0,15,189	0/1:12,5:19:29.90:242,0,30	1/1:3,6:10:10.37:126,10,0	1/1:1,4:5:6.59:93,7,0	0/1:10,0:18:15.08:16,0,15	0/1:10,1:24:30.96:31,0,32	0/1:5,1:17:10.56:11,0,53	0/0:15,0:18:51.13:0,51,810	0/1:11,10:23:79.95:339,0,80	1/1:6,16:21:46.43:514,46,0	0/1:7,3:10:12.71:97,0,13
chr10	101191072	.	G	GA	2057.40	PASS	AB=0.581;AC=9;AF=0.161;AN=56;BaseQRankSum=0.821;DP=567;FS=0.000;HRun=9;HaplotypeScore=76.4701;InbreedingCoeff=0.8663;MQ=80.18;MQ0=0;MQRankSum=-2.813;QD=21.66;ReadPosRankSum=0.213;VQSLOD=4.1773;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,20:26:51.14:564,51,0	0/0:9,0:9:26.98:0,27,231	0/0:17,0:17:20.85:0,21,172	0/0:14,0:16:26.99:0,27,234	0/0:35,0:36:89:0,89,761	0/0:30,0:31:88.94:0,89,746	0/0:19,0:21:49.03:0,49,398	0/0:32,0:32:86.93:0,87,747	0/0:20,0:20:53.97:0,54,464	0/0:15,0:15:41.99:0,42,365	0/0:17,0:17:38.99:0,39,339	0/1:7,18:25:17.91:504,0,18	0/0:26,0:26:68.95:0,69,593	0/0:20,0:20:56.96:0,57,491	0/0:21,0:21:56.96:0,57,489	0/0:20,0:20:50.98:0,51,443	0/0:23,0:23:65.95:0,66,563	0/0:15,0:15:38.98:0,39,338	0/0:21,0:21:50.94:0,51,433	0/0:21,0:21:56.65:0,57,476	0/0:11,0:11:29.98:0,30,257	1/1:3,14:17:36.10:398,36,0	1/1:3,12:15:36.09:391,36,0	1/1:1,11:12:33.09:365,33,0	0/0:16,0:16:47.99:0,48,417	0/0:27,0:27:62.95:0,63,547	0/0:31,0:31:89.95:0,90,775	0/0:6,0:6:18:0,18,156
chr10	101192391	.	A	AT	679.46	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.283;DP=618;FS=23.170;HRun=9;HaplotypeScore=61.5000;InbreedingCoeff=0.9050;MQ=76.63;MQ0=0;MQRankSum=-0.738;QD=26.13;ReadPosRankSum=-1.005;VQSLOD=2.0150;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:26:70.09:774,70,0	0/0:5,0:5:15:0,15,130	0/0:19,0:17:32.64:0,33,267	0/0:19,0:19:13.34:0,13,159	0/0:22,0:22:62.95:0,63,537	0/0:34,0:34:95.98:0,96,833	0/0:21,0:22:55.99:0,56,470	0/0:29,0:29:68.87:0,69,588	0/0:16,0:16:41.98:0,42,365	0/0:27,0:27:68.96:0,69,593	0/0:32,0:32:92.98:0,93,807	0/0:15,0:15:41.99:0,42,365	0/0:17,0:17:47.99:0,48,416	0/0:18,0:18:50.95:0,51,434	0/0:23,0:23:65.97:0,66,569	0/0:12,0:12:35.99:0,36,313	0/0:19,1:20:20.81:0,21,410	0/0:13,0:13:38.98:0,39,335	0/0:30,0:31:68:0,68,579	0/0:34,0:34:95.98:0,96,833	0/0:19,0:19:50.98:0,51,440	0/0:16,0:16:47.99:0,48,417	0/0:26,0:26:74.98:0,75,651	0/0:14,1:15:8.80:0,9,303	0/0:18,0:18:50.99:0,51,443	0/0:33,0:33:92.88:0,93,785	0/0:34,0:34:95.85:0,96,823	0/0:23,0:23:62.99:0,63,547
chr10	101192998	.	TTGTGTG	T	4690.31	PASS	AB=0.768;AC=18;AF=0.321;AN=56;BaseQRankSum=9.010;DP=694;FS=8.164;HRun=0;HaplotypeScore=176.8852;InbreedingCoeff=0.7455;MQ=62.32;MQ0=11;MQRankSum=-7.975;QD=21.22;ReadPosRankSum=0.436;VQSLOD=3.8943;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:26:5.22:5,0,198	1/1:4,10:14:21.07:423,21,0	0/0:21,0:14:18.06:0,18,411	0/0:34,0:12:11.64:0,12,122	0/0:27,0:28:61.49:0,61,1656	0/0:20,0:23:55.97:0,56,1508	0/0:29,0:33:77.99:0,78,2176	1/1:19,4:24:41.27:556,41,0	0/0:27,0:27:60.65:0,61,1758	0/0:31,0:32:66.22:0,66,1811	0/0:15,0:15:36.12:0,36,887	0/0:22,0:22:8.48:0,8,117	0/0:23,0:27:66.17:0,66,1487	0/0:31,0:32:75.22:0,75,2080	1/1:6,15:22:36.12:690,36,0	0/0:13,0:26:33.11:0,33,899	0/0:32,0:32:69.61:0,70,1834	0/0:34,0:34:75.16:0,75,2138	1/1:10,19:29:63.02:1042,63,0	1/1:9,19:29:26.76:470,27,0	1/1:12,12:23:4.07:62,4,0	0/0:17,0:16:11.10:0,11,115	0/0:16,0:16:8.98:0,9,73	0/0:18,0:17:3.48:0,3,49	0/0:26,0:33:72.23:0,72,2040	0/1:3,18:22:40.14:938,0,40	1/1:15,3:18:27.05:461,27,0	1/1:2,5:8:3.01:42,3,0
chr10	101193025	.	TGC	T	924.27	PASS	AB=0.981;AC=16;AF=0.286;AN=56;BaseQRankSum=12.402;DP=699;FS=14.645;HRun=0;HaplotypeScore=153.2089;InbreedingCoeff=0.2731;MQ=51.52;MQ0=20;MQRankSum=-5.535;QD=3.28;ReadPosRankSum=-0.774;VQSLOD=1.9672;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,6:32:98.40:313,0,98	0/1:12,0:12:5.07:5,0,12	0/0:28,0:13:1.26:0,1,190	0/1:41,0:3:23.01:23,0,27	0/0:23,0:23:40.72:0,41,798	0/0:22,0:22:35.35:0,35,764	0/0:43,0:43:67.58:0,68,1592	0/1:32,0:31:8.99:9,0,231	0/0:25,0:25:75.12:0,75,1159	0/0:24,0:24:32.35:0,32,775	0/0:20,0:20:21.58:0,22,625	1/1:29,0:29:21.91:229,22,0	0/0:25,0:25:47.58:0,48,896	0/0:30,0:30:86.81:0,87,1164	0/0:24,0:23:3.58:0,4,97	0/0:25,0:25:48.69:0,49,987	0/0:33,0:33:75.24:0,75,1302	0/0:31,0:30:68.44:0,68,1048	0/1:22,0:21:11.08:70,0,11	0/1:20,0:19:7.77:8,0,12	0/0:27,0:26:16.79:0,17,109	1/1:16,0:15:14.93:118,15,0	1/1:14,0:12:14.84:124,15,0	1/1:20,0:19:14.96:120,15,0	0/0:29,0:29:5.97:0,6,831	0/1:27,0:26:39.70:40,0,96	0/1:15,0:15:9.35:40,0,9	0/0:8,0:8:3.76:0,4,17
chr10	101193027	.	CGTGT	C	4074	PASS	AB=0.730;AC=17;AF=0.304;AN=56;BaseQRankSum=7.957;DP=691;FS=4.506;HRun=0;HaplotypeScore=163.5023;InbreedingCoeff=0.7975;MQ=51.70;MQ0=18;MQRankSum=-6.528;QD=22.14;ReadPosRankSum=-0.051;VQSLOD=3.4770;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:32:43.03:0,43,593	1/1:5,6:12:27.08:396,27,0	0/0:29,0:14:20.24:0,20,265	0/0:37,0:4:10.25:0,10,81	0/0:18,0:20:39.73:0,40,824	0/0:23,0:24:54.59:0,55,1020	0/0:41,0:43:95.49:0,95,1706	1/1:10,21:30:58.49:733,58,0	0/0:25,0:25:60.19:0,60,1251	0/0:22,0:22:47.94:0,48,885	0/0:20,0:20:41.83:0,42,691	0/0:28,0:29:4.67:0,5,44	0/0:26,0:26:59.90:0,60,1043	0/0:31,0:31:66.15:0,66,1139	1/1:12,12:23:54.16:788,54,0	0/0:24,0:25:56.97:0,57,1078	0/0:32,0:33:75.42:0,75,1415	0/0:31,0:32:51.44:0,51,1090	1/1:15,8:22:30.04:397,30,0	1/1:11,9:19:31.46:463,31,0	1/1:22,3:24:24.06:327,24,0	0/0:16,0:15:4.37:0,4,25	0/0:13,0:11:0.47:0,0,1	0/0:20,0:19:5.34:0,5,48	0/0:25,0:27:62.63:0,63,1127	0/1:17,10:26:26.96:753,0,27	1/1:4,11:15:9.03:130,9,0	1/1:6,1:7:6.02:87,6,0
chr10	101194397	.	AT	A	4323.55	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.096;DP=498;FS=0.000;HRun=8;HaplotypeScore=48.6385;InbreedingCoeff=0.9446;MQ=64.00;MQ0=1;MQRankSum=-2.330;QD=25.58;ReadPosRankSum=-0.335;VQSLOD=5.1112;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.17:0,57,688	1/1:0,14:14:42.07:406,42,0	0/0:5,0:4:3.01:0,3,36	0/0:5,0:5:2.72:0,3,20	0/0:31,0:31:87.25:0,87,1037	0/0:18,0:18:48.14:0,48,569	0/0:15,0:15:42.13:0,42,507	1/1:6,25:31:75.09:716,75,0	0/0:16,0:16:33.10:0,33,399	0/0:25,0:25:72.22:0,72,869	0/0:23,0:23:66.20:0,66,797	0/0:9,0:9:24.07:0,24,290	0/0:20,0:20:57.11:0,57,651	0/0:16,0:16:45.14:0,45,544	1/1:3,13:16:42.06:406,42,0	0/0:20,0:19:51.16:0,51,616	0/0:25,0:25:75.23:0,75,906	0/0:12,0:12:33.10:0,33,399	1/1:3,22:24:63.10:608,63,0	1/1:0,11:11:33.05:319,33,0	1/1:1,9:10:24.03:232,24,0	0/0:16,0:16:36.07:0,36,418	0/0:16,0:16:48.15:0,48,579	0/0:15,0:15:39.12:0,39,470	0/0:22,0:22:57.17:0,57,688	1/1:1,21:22:30.13:572,30,0	1/1:1,19:20:57.09:550,57,0	1/1:2,18:20:54.06:515,54,0
chr10	101194492	.	CTT	C	4485.05	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=12.507;DP=510;FS=34.045;HRun=5;HaplotypeScore=92.5695;InbreedingCoeff=0.8609;MQ=56.03;MQ0=20;MQRankSum=-9.360;QD=21.56;ReadPosRankSum=-2.499;VQSLOD=0.9847;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:8.37:118,0,8	1/1:1,1:2:3.01:42,3,0	0/0:29,0:10:4.70:0,5,58	0/0:26,0:4:5.23:0,5,51	0/0:27,0:27:81.26:0,81,1356	0/0:25,0:25:72.24:0,72,1213	0/0:12,0:12:27.09:0,27,476	1/1:12,19:28:51.06:792,51,0	0/0:10,0:10:30.10:0,30,520	0/0:15,0:15:45.15:0,45,777	0/0:25,0:25:71.72:0,72,1158	1/1:8,4:11:11.07:191,11,0	0/0:22,0:22:66.22:0,66,1114	0/0:20,0:20:57.19:0,57,978	1/1:2,10:11:27.09:377,27,0	0/0:12,0:12:36.12:0,36,641	0/0:37,0:37:93.10:0,93,1682	0/0:15,0:14:39.13:0,39,645	1/1:3,10:12:20.28:388,20,0	1/1:3,17:17:51.17:711,51,0	1/1:2,9:6:18.06:251,18,0	1/1:9,4:13:19.57:204,20,0	1/1:21,5:23:45.59:389,46,0	1/1:11,3:12:8.80:124,9,0	0/0:27,0:27:78.27:0,78,1363	1/1:3,12:10:30.10:418,30,0	1/1:4,12:10:27.09:374,27,0	1/1:1,6:6:16.38:105,16,0
chr10	101194494	.	T	TTC	4761.75	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=12.089;DP=502;FS=29.278;HRun=0;HaplotypeScore=91.8400;InbreedingCoeff=0.9248;MQ=54.86;MQ0=21;MQRankSum=-9.084;QD=23.23;ReadPosRankSum=-2.400;VQSLOD=2.9157;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:17:32.99:426,33,0	1/1:1,0:1:3.01:42,3,0	0/0:26,0:8:4.67:0,5,58	0/0:25,0:3:5.23:0,5,51	0/0:28,0:28:81.26:0,81,1211	0/0:25,0:25:72.24:0,72,1077	0/0:11,0:11:30.06:0,30,431	1/1:30,0:26:52.84:775,53,0	0/0:10,0:10:30.10:0,30,457	0/0:16,0:16:45.15:0,45,687	0/0:23,0:24:71.72:0,72,1040	1/1:9,1:11:17.31:311,17,0	0/0:22,0:22:66.22:0,66,986	0/0:20,0:20:60.19:0,60,894	1/1:12,0:11:16.07:236,16,0	0/0:12,0:12:36.12:0,36,549	0/0:36,0:36:85.49:0,85,1479	0/0:15,0:14:39.12:0,39,570	1/1:12,0:11:22.83:283,23,0	1/1:20,0:17:44.46:472,44,0	1/1:10,1:6:14.42:208,14,0	1/1:9,2:12:10.89:287,11,0	1/1:10,15:24:40.92:777,41,0	1/1:7,2:11:15.46:221,15,0	0/0:26,0:26:78.26:0,78,1189	1/1:14,1:10:22.29:198,22,0	1/1:15,1:10:16.04:200,16,0	1/1:7,0:6:18.06:326,18,0
chr10	101194495	.	T	TC	556.59	PASS	AB=0.985;AC=14;AF=0.250;AN=56;BaseQRankSum=9.567;DP=504;FS=1.856;HRun=0;HaplotypeScore=100.2136;InbreedingCoeff=0.5562;MQ=54.83;MQ0=21;MQRankSum=-6.922;QD=3.76;ReadPosRankSum=-3.041;VQSLOD=3.0221;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:16.47:0,16,59	0/0:1,0:1:0:0,0,0	0/0:24,0:8:6.46:0,6,56	0/0:25,0:3:0.26:0,0,37	0/0:28,0:28:81.26:0,81,1114	0/0:26,0:26:72.23:0,72,990	0/0:11,0:11:30.06:0,30,397	0/1:29,2:27:0.18:0,0,46	0/0:10,0:10:30.10:0,30,419	0/0:16,0:16:48.16:0,48,658	0/0:24,0:24:71.04:0,71,954	1/1:11,3:13:22.72:180,23,0	0/0:22,0:22:66.21:0,66,907	0/0:20,0:20:60.19:0,60,824	0/0:12,0:11:8.15:0,8,25	0/0:13,0:13:36.12:0,36,503	0/0:36,0:36:99:0,107,1397	0/0:14,0:14:39.13:0,39,532	0/1:12,0:11:16.98:30,0,17	0/0:20,0:17:5.67:0,6,42	0/0:11,0:6:2.51:0,3,7	1/1:13,0:13:18.62:95,19,0	1/1:26,1:24:37.25:234,37,0	1/1:12,1:11:7.88:96,8,0	0/0:26,0:26:78.26:0,78,1090	0/1:15,0:10:17.90:18,0,18	0/1:16,0:10:2.27:2,0,20	1/1:7,0:6:14.03:68,14,0
chr10	101194523	.	T	TC	522.71	PASS	AB=0.847;AC=5;AF=0.096;AN=52;BaseQRankSum=8.098;DP=436;FS=5.483;HRun=1;HaplotypeScore=113.4038;InbreedingCoeff=-0.1183;MQ=47.31;MQ0=12;MQRankSum=-7.697;QD=6.08;ReadPosRankSum=2.851;VQSLOD=0.9230;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:12.62:0,13,413	./.	0/0:9,0:1:3.01:0,3,41	./.	0/0:29,0:29:87.29:0,87,1216	0/0:19,0:19:55.43:0,55,756	0/0:13,0:13:33.09:0,33,425	0/0:23,0:20:50.88:0,51,637	0/0:13,0:13:36.12:0,36,503	0/0:15,0:15:45.15:0,45,630	0/0:24,0:24:69.22:0,69,951	0/1:11,5:16:45.85:271,0,46	0/0:21,0:21:60.19:0,60,824	0/0:15,0:15:45.15:0,45,629	0/1:6,0:5:5.68:6,0,152	0/0:14,0:14:36.12:0,36,504	0/0:42,0:40:70.76:0,71,1419	0/0:15,0:13:20.04:0,20,326	0/0:6,0:4:12.04:0,12,167	0/0:13,0:12:36.12:0,36,470	0/0:4,0:3:6:0,6,66	0/1:14,2:18:99:155,0,169	0/1:29,2:30:99:158,0,388	0/1:9,1:12:38:44,0,38	0/0:20,0:20:60.17:0,60,804	0/0:8,0:7:21.07:0,21,284	0/0:7,0:6:18.06:0,18,232	0/0:9,0:5:14.18:0,14,102
chr10	101194529	.	CT	C	432.88	PASS	AB=0.769;AC=4;AF=0.080;AN=50;BaseQRankSum=6.403;DP=411;FS=1.521;HRun=3;HaplotypeScore=110.1467;InbreedingCoeff=-0.1034;MQ=47.45;MQ0=11;MQRankSum=-6.669;QD=5.34;ReadPosRankSum=-2.980;VQSLOD=-0.5547;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:41.43:0,41,553	./.	0/0:8,0:1:3.01:0,3,43	./.	0/0:32,0:32:96.32:0,96,1371	0/0:15,0:15:38.24:0,38,540	0/0:13,0:13:33.08:0,33,437	0/0:21,0:18:40.28:0,40,456	0/0:12,0:12:36.12:0,36,517	0/0:18,0:18:54.18:0,54,762	0/0:23,0:23:66.22:0,66,942	0/1:11,6:16:99:139,0,290	0/0:21,0:21:60.20:0,60,859	0/0:13,0:13:39.13:0,39,558	0/0:6,0:5:15.02:0,15,183	0/0:16,0:16:36.12:0,36,517	0/0:40,0:37:99:0,101,1408	0/0:12,0:10:25.64:0,26,350	0/0:6,0:4:12.03:0,12,154	0/0:9,0:8:24.08:0,24,343	0/0:4,0:3:6.02:0,6,75	0/1:15,3:18:50.17:50,0,356	0/1:23,9:30:99:217,0,439	0/1:8,6:13:27.14:134,0,27	0/0:17,0:17:51.14:0,51,696	0/0:7,0:6:15.05:0,15,214	0/0:5,0:4:12.04:0,12,170	./.
chr10	101194541	.	C	CT	2071.17	PASS	AB=0.848;AC=16;AF=0.320;AN=50;BaseQRankSum=10.976;DP=424;FS=22.197;HRun=3;HaplotypeScore=104.0865;InbreedingCoeff=0.2519;MQ=47.58;MQ0=15;MQRankSum=-9.970;QD=13.28;ReadPosRankSum=0.469;VQSLOD=1.5694;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:18:30.06:119,0,30	./.	0/0:6,0:1:3.01:0,3,37	./.	0/0:34,0:34:96.27:0,96,1175	0/0:14,0:14:34.33:0,34,398	0/0:16,1:17:45.12:0,45,533	0/1:10,0:9:0:0,0,0	0/0:12,0:12:33.10:0,33,408	0/0:16,0:16:45.14:0,45,558	0/0:20,0:20:57.18:0,57,703	0/1:12,3:16:70.36:186,0,70	0/0:21,0:21:54.17:0,54,668	0/0:12,0:12:33.10:0,33,409	0/1:2,6:7:9.90:227,0,10	0/0:18,0:18:30.09:0,30,372	0/0:45,1:43:67.64:0,68,1250	0/0:14,0:12:8.05:0,8,243	0/1:3,5:7:30.31:187,0,30	1/1:4,8:11:33.08:406,33,0	1/1:2,2:3:3.01:42,3,0	0/1:15,2:20:26.73:245,0,27	0/1:25,2:27:93.17:363,0,93	0/1:16,2:17:82.43:82,0,121	0/0:19,0:19:57.18:0,57,700	1/1:1,6:6:18.06:249,18,0	1/1:4,1:5:9.03:125,9,0	./.
chr10	101194542	.	T	TC	1554.21	PASS	AB=0.922;AC=16;AF=0.320;AN=50;BaseQRankSum=11.923;DP=420;FS=14.704;HRun=1;HaplotypeScore=104.2218;InbreedingCoeff=0.1911;MQ=47.92;MQ0=15;MQRankSum=-10.966;QD=10.09;ReadPosRankSum=1.343;VQSLOD=0.3007;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:17:44.58:119,0,45	./.	0/0:5,0:1:3.01:0,3,41	./.	0/0:34,0:34:99:0,99,1362	0/0:14,0:14:37.33:0,37,483	0/0:17,0:17:45.15:0,45,625	1/1:9,0:8:11.11:68,11,0	0/0:12,0:12:36.11:0,36,486	0/0:17,0:17:48.15:0,48,654	0/0:19,0:19:57.19:0,57,791	0/1:16,1:16:99:140,0,173	0/0:19,0:19:57.18:0,57,781	0/0:12,0:12:36.11:0,36,488	0/1:9,0:8:20.58:103,0,21	0/0:19,0:19:33.10:0,33,446	0/0:47,0:43:65.69:0,66,1527	0/0:14,0:12:14.14:0,14,304	0/1:8,0:7:41.61:82,0,42	1/1:13,0:12:26.18:166,26,0	1/1:4,0:3:2.98:22,3,0	0/1:14,4:18:99:258,0,100	0/1:17,11:26:99:514,0,231	0/1:17,1:17:85.35:85,0,180	0/0:19,0:19:57.19:0,57,791	1/1:7,0:6:17.85:128,18,0	0/1:6,0:6:30.44:34,0,30	./.
chr10	101194546	.	TTCTC	T	887.36	PASS	AB=0.909;AC=15;AF=0.313;AN=48;BaseQRankSum=8.648;DP=413;FS=0.000;HRun=0;HaplotypeScore=127.4738;InbreedingCoeff=0.3330;MQ=48.48;MQ0=14;MQRankSum=-9.352;QD=6.21;ReadPosRankSum=-1.681;VQSLOD=2.3651;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:24.57:25,0,122	./.	0/0:5,0:1:2.84:0,3,14	./.	0/0:34,0:34:93.01:0,93,1431	0/0:14,0:14:36.01:0,36,474	0/0:17,0:17:45.02:0,45,773	./.	0/0:10,0:10:24.07:0,24,584	0/0:18,0:18:51.06:0,51,911	0/0:20,0:20:59.90:0,60,939	0/1:14,3:16:46.94:280,0,47	0/0:18,0:18:26.79:0,27,877	0/0:14,0:14:39.01:0,39,578	1/1:8,0:8:17.45:116,17,0	0/0:20,0:20:29.96:0,30,282	0/0:47,0:43:99:0,103,1791	0/0:14,0:12:23.40:0,23,315	0/1:7,0:7:1.90:72,0,2	1/1:12,0:11:11.77:68,12,0	1/1:4,0:3:3.44:21,3,0	0/1:15,3:18:99:160,0,105	0/1:26,2:26:99:110,0,185	0/1:11,7:17:72.47:108,0,72	0/0:19,0:19:53.56:0,54,690	1/1:9,0:8:10.22:71,10,0	0/1:5,0:5:2.13:16,0,2	./.
chr10	101194550	.	C	CTCTT	497.35	PASS	AB=1.000;AC=22;AF=0.478;AN=46;BaseQRankSum=5.404;DP=407;FS=7.349;HRun=0;HaplotypeScore=125.8643;InbreedingCoeff=0.6017;MQ=49.33;MQ0=15;MQRankSum=-1.329;QD=2.91;ReadPosRankSum=-0.697;VQSLOD=1.5651;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:0.47:1,0,0	./.	./.	./.	0/0:34,0:34:42.13:0,42,619	0/0:16,0:16:24.03:0,24,292	0/0:19,0:19:33.05:0,33,419	./.	0/0:8,0:8:21.07:0,21,321	0/0:18,0:18:18.69:0,19,434	0/0:20,0:20:27.09:0,27,412	1/1:17,0:16:12.55:58,13,0	0/0:15,0:16:30.09:0,30,434	0/0:14,0:14:24.06:0,24,338	1/1:8,0:8:4.80:14,5,0	1/1:11,10:21:3.01:70,3,0	0/0:46,0:43:53.07:0,53,779	1/1:5,10:13:12.04:280,12,0	1/1:8,0:6:3.94:27,4,0	1/1:5,0:5:12.73:98,13,0	0/1:3,0:3:0:0,0,0	0/1:20,0:20:9.44:9,0,33	0/1:28,0:26:7.06:7,0,104	0/1:18,0:17:1.98:2,0,69	0/0:19,0:19:18.05:0,18,255	1/1:7,0:7:11:64,11,0	1/1:4,0:4:4.24:27,4,0	./.
chr10	101194552	.	CTT	C	304.98	PASS	AB=0.915;AC=7;AF=0.140;AN=50;BaseQRankSum=8.901;DP=414;FS=0.000;HRun=3;HaplotypeScore=109.3832;InbreedingCoeff=0.0016;MQ=49.31;MQ0=16;MQRankSum=-7.859;QD=2.93;ReadPosRankSum=2.434;VQSLOD=-0.5837;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,2:16:42.37:106,0,42	./.	1/1:4,0:1:1.25:3,1,0	./.	0/0:35,0:35:99:0,99,1513	0/0:17,0:17:48.15:0,48,746	0/0:19,0:19:54.17:0,54,875	0/0:9,0:6:8.92:0,9,64	0/0:8,0:8:24.08:0,24,445	0/0:17,0:17:31.67:0,32,748	0/0:21,0:21:63.19:0,63,982	0/1:15,2:16:99:115,0,116	0/0:16,0:16:40.93:0,41,772	0/0:13,0:13:39.12:0,39,648	0/0:8,0:8:24.06:0,24,285	0/0:21,0:21:30.09:0,30,374	0/0:46,0:42:90.90:0,91,1790	0/0:16,0:14:19.68:0,20,263	0/0:11,0:8:20.49:0,20,202	0/0:5,0:5:15.05:0,15,212	0/0:3,0:3:6.01:0,6,60	0/1:18,2:20:82.10:82,0,136	0/1:26,2:26:91.69:92,0,324	0/1:18,1:18:24.16:24,0,248	0/0:19,0:19:57.18:0,57,830	0/0:8,0:8:24.01:0,24,265	0/0:4,0:4:12.04:0,12,173	./.
chr10	101194572	.	CT	C	2563.29	PASS	AB=0.873;AC=18;AF=0.360;AN=50;BaseQRankSum=9.236;DP=414;FS=0.912;HRun=3;HaplotypeScore=90.9107;InbreedingCoeff=0.3709;MQ=51.49;MQ0=9;MQRankSum=-6.338;QD=14.40;ReadPosRankSum=-3.472;VQSLOD=2.0248;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,4:13:84.34:138,0,84	./.	./.	./.	0/0:30,0:30:84.27:0,84,1169	0/0:18,0:18:54.18:0,54,748	0/0:16,0:16:48.16:0,48,684	0/1:3,11:12:5.89:357,0,6	0/0:10,0:10:30.10:0,30,424	0/0:15,0:15:44.64:0,45,609	0/0:21,0:21:63.20:0,63,879	0/1:15,0:14:87.69:88,0,154	0/0:16,0:16:43.03:0,43,598	0/0:16,0:16:48.16:0,48,665	1/1:0,11:11:33.10:404,33,0	0/0:17,0:17:18.05:0,18,233	0/0:38,0:37:99:0,104,1369	0/0:23,0:21:44.92:0,45,498	0/1:7,5:8:56.07:196,0,56	1/1:0,8:8:24.05:273,24,0	1/1:0,9:9:18.06:223,18,0	0/1:20,0:20:99:143,0,215	0/1:29,0:27:99:111,0,431	0/1:20,1:20:19.79:20,0,413	0/0:15,0:15:42.14:0,42,593	1/1:0,13:13:39.12:478,39,0	1/1:0,8:8:24.07:295,24,0	0/1:5,0:2:0.60:17,0,1
chr10	101194728	.	CT	C	4518.84	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=11.225;DP=552;FS=3.210;HRun=9;HaplotypeScore=65.2888;InbreedingCoeff=0.9559;MQ=66.23;MQ0=14;MQRankSum=-5.965;QD=20.17;ReadPosRankSum=-0.470;VQSLOD=5.1968;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:36.02:329,36,0	1/1:1,8:8:24.01:219,24,0	0/0:46,1:18:0.99:0,1,256	0/0:52,0:20:38.26:0,38,352	0/0:28,0:28:72.19:0,72,810	0/0:25,0:25:69.20:0,69,794	0/0:15,0:15:42.11:0,42,471	1/1:8,22:29:66.01:603,66,0	0/0:11,0:11:33.09:0,33,373	0/0:12,0:12:30.09:0,30,345	0/0:21,0:21:60.16:0,60,679	1/1:0,9:9:21.01:192,21,0	0/0:20,0:20:51.13:0,51,569	0/0:18,0:18:48.14:0,48,552	1/1:3,11:12:24.01:219,24,0	0/0:15,0:15:39.10:0,39,439	0/0:25,2:26:17.32:0,17,702	0/0:25,0:25:72.21:0,72,821	1/1:3,14:15:39.01:352,39,0	1/1:1,17:18:51.03:466,51,0	1/1:5,6:10:18.01:164,18,0	1/1:5,5:9:9:82,9,0	1/1:4,18:20:39.01:357,39,0	1/1:2,11:12:21.01:192,21,0	0/0:11,0:11:27.06:0,27,295	1/1:2,19:21:60.03:548,60,0	1/1:4,18:21:57.03:520,57,0	1/1:2,14:16:30.01:274,30,0
chr10	101194752	.	CT	C	2718.01	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=8.192;DP=567;FS=0.837;HRun=9;HaplotypeScore=81.4500;InbreedingCoeff=0.9807;MQ=75.79;MQ0=8;MQRankSum=-8.293;QD=19.70;ReadPosRankSum=-0.595;VQSLOD=3.6763;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:59.96:0,60,661	1/1:4,4:8:12:109,12,0	0/0:63,0:30:59.08:0,59,569	0/0:64,0:32:29.34:0,29,394	0/0:25,0:26:72.03:0,72,795	0/0:21,0:21:60.18:0,60,692	0/0:16,0:16:42.12:0,42,485	1/1:8,18:26:64.56:575,65,0	0/0:15,0:15:45.10:0,45,496	0/0:16,0:16:42.12:0,42,485	0/0:19,0:19:54.16:0,54,623	0/0:9,0:9:24.07:0,24,274	0/0:21,0:22:57:0,57,638	0/0:16,0:16:45.13:0,45,519	1/1:3,10:12:27.01:247,27,0	0/0:16,0:16:42.12:0,42,484	0/0:25,0:24:57.99:0,58,624	0/0:27,0:27:63.15:0,63,713	1/1:3,7:10:21.01:192,21,0	1/1:4,22:26:66.02:603,66,0	1/1:4,6:10:18:165,18,0	0/0:5,0:5:15.04:0,15,173	0/0:21,0:21:54.08:0,54,593	0/0:11,0:11:27.08:0,27,312	0/0:15,0:15:45.12:0,45,508	1/1:3,20:23:63.02:573,63,0	1/1:2,15:17:42.01:384,42,0	1/1:2,3:5:9:82,9,0
chr10	101196369	.	TAA	T	700.43	PASS	AB=0.750;AC=7;AF=0.125;AN=56;BaseQRankSum=4.876;DP=568;FS=4.129;HRun=16;HaplotypeScore=106.5169;InbreedingCoeff=0.8029;MQ=75.25;MQ0=0;MQRankSum=-2.125;QD=10.61;ReadPosRankSum=3.009;VQSLOD=2.8704;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:30:37.99:0,38,259	0/0:10,0:10:20.98:0,21,179	0/0:25,0:14:11.80:0,12,167	0/0:18,0:19:16.61:0,17,137	0/0:20,0:21:51.02:0,51,558	0/0:34,0:36:82.88:0,83,940	0/0:11,0:14:39.11:0,39,477	0/0:29,0:29:48.11:0,48,378	0/0:14,0:15:29.45:0,29,311	0/0:26,0:29:51.60:0,52,622	0/0:11,0:12:23.42:0,23,265	1/1:5,9:15:11.74:136,12,0	0/0:25,0:27:63.06:0,63,725	0/0:15,0:15:45.05:0,45,500	0/0:21,0:21:50.95:0,51,427	0/0:10,0:24:32.39:0,32,287	0/0:9,0:11:17.40:0,17,189	0/0:10,0:13:39.05:0,39,443	0/0:27,0:26:61.83:0,62,514	0/0:25,0:25:53.92:0,54,448	0/0:12,0:12:17.98:0,18,150	1/1:5,12:18:29.72:281,30,0	0/1:10,3:15:23.93:52,0,24	1/1:0,18:18:44.95:376,45,0	0/0:26,0:27:67.45:0,67,768	0/0:30,0:30:80.87:0,81,680	0/0:19,0:20:41.95:0,42,352	0/0:7,0:7:14.98:0,15,125
chr10	101196380	.	A	AAC	5742.76	PASS	AB=0.773;AC=18;AF=0.321;AN=56;BaseQRankSum=-5.040;DP=586;FS=6.093;HRun=0;HaplotypeScore=92.2642;InbreedingCoeff=0.8616;MQ=71.53;MQ0=0;MQRankSum=3.159;QD=28.71;ReadPosRankSum=4.439;VQSLOD=6.4294;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:71.97:0,72,658	1/1:0,8:8:20.99:282,21,0	0/0:28,0:16:41.30:0,41,337	0/0:15,0:13:16.84:0,17,164	0/0:22,0:22:64.82:0,65,642	0/0:38,0:38:99:0,108,1193	0/0:16,0:16:47.84:0,48,506	1/1:5,24:32:74.38:777,74,0	0/0:14,0:14:41.92:0,42,415	0/0:27,0:26:77.72:0,78,811	0/0:11,0:11:29.98:0,30,308	0/0:17,0:17:41.88:0,42,344	0/0:29,0:29:78.04:0,78,833	0/0:16,0:16:48:0,48,521	1/1:0,20:21:51.17:750,51,0	0/1:20,0:19:16.20:16,0,135	0/0:14,0:14:34.85:0,35,334	0/0:17,0:17:50.83:0,51,522	1/1:1,24:27:76.98:974,77,0	1/1:1,21:24:59.51:766,60,0	0/1:2,9:12:3.02:252,0,3	0/0:20,0:20:55.99:0,56,434	0/0:17,0:17:36.20:0,36,319	0/0:21,0:21:50.95:0,51,423	0/0:30,0:30:86.94:0,87,926	1/1:2,26:29:43.76:1109,44,0	1/1:1,17:19:41.93:588,42,0	1/1:0,8:8:15.05:228,15,0
chr10	101196629	.	C	CGTGT	2171.46	PASS	AB=0.962;AC=22;AF=0.423;AN=52;BaseQRankSum=-2.563;DP=699;FS=10.821;HRun=0;HaplotypeScore=137.3595;InbreedingCoeff=0.4302;MQ=65.05;MQ0=14;MQRankSum=0.581;QD=6.37;ReadPosRankSum=-3.959;VQSLOD=0.6921;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:41:36.02:0,36,330	1/1:5,6:13:14.79:281,15,0	./.	./.	0/1:24,0:24:3.40:3,0,179	0/0:14,0:18:21.04:0,21,263	0/0:24,0:27:42.11:0,42,595	1/1:33,0:33:12.04:150,12,0	0/0:21,0:22:30.05:0,30,385	0/1:20,0:23:28.94:29,0,173	0/0:17,0:18:9.02:0,9,122	0/0:17,0:32:30.03:0,30,279	0/0:21,0:22:6.94:0,7,392	0/0:27,0:29:30.06:0,30,513	1/1:14,17:35:29.57:591,30,0	1/1:9,2:26:18.06:329,18,0	0/1:16,0:17:9.22:9,0,131	1/1:9,0:12:5.79:33,6,0	1/1:22,2:23:12.72:226,13,0	0/1:14,3:20:24.80:216,0,25	1/1:28,10:44:6.02:139,6,0	0/0:11,0:25:20.43:0,20,178	0/0:12,0:24:9.46:0,9,85	0/0:16,0:24:3:0,3,28	0/1:16,0:17:42.65:43,0,157	0/1:28,0:28:75.56:76,0,133	1/1:19,2:22:15.63:230,16,0	0/0:9,0:9:3.01:0,3,47
chr10	101196888	.	G	GA	6918.14	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-15.400;DP=729;FS=3.126;HRun=7;HaplotypeScore=66.8703;InbreedingCoeff=0.9950;MQ=73.91;MQ0=0;MQRankSum=0.123;QD=29.31;ReadPosRankSum=-1.827;VQSLOD=4.7968;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,99,948	1/1:0,10:10:30.09:362,30,0	0/0:20,0:19:33.04:0,33,318	0/0:6,0:6:12.01:0,12,113	0/0:27,0:27:66.10:0,66,637	0/0:29,0:29:75.11:0,75,724	0/0:24,0:24:69.11:0,69,666	1/1:4,28:32:84.24:1002,84,0	0/0:21,0:21:51.08:0,51,492	0/0:40,0:40:99:0,108,1039	0/0:23,0:23:45.06:0,45,434	0/0:27,0:27:75.12:0,75,724	0/0:35,0:35:93.14:0,93,898	0/0:22,0:22:54.04:0,54,513	1/1:9,30:39:87.27:1051,87,0	0/0:38,0:38:99:0,99,945	0/0:20,0:20:51.08:0,51,493	0/0:19,0:19:51.03:0,51,483	1/1:5,21:26:63.18:747,63,0	1/1:3,19:22:48.11:563,48,0	1/1:2,25:27:66.20:797,66,0	0/0:23,0:23:54.06:0,54,515	0/0:23,0:23:57.08:0,57,550	0/0:32,0:32:81.13:0,81,782	0/0:26,0:26:60.08:0,60,579	1/1:3,27:30:55.28:946,55,0	1/1:6,30:36:81.12:978,81,0	1/1:0,14:14:39.12:471,39,0
chr10	101197192	.	T	TTC	159.33	PASS	AB=0.891;AC=6;AF=0.130;AN=46;BaseQRankSum=-0.945;DP=567;FS=4.089;HRun=0;HaplotypeScore=130.6830;InbreedingCoeff=0.0601;MQ=71.10;MQ0=11;MQRankSum=0.444;QD=1.44;ReadPosRankSum=-0.501;VQSLOD=1.8229;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:20.21:0,20,141	0/0:9,0:9:11.36:0,11,56	1/1:23,0:15:0.47:1,0,0	./.	0/1:19,6:25:4.52:55,0,5	0/0:15,0:15:10.80:0,11,55	0/0:14,0:14:8.43:0,8,40	./.	0/0:17,0:17:2.52:0,3,32	0/0:24,0:24:16.66:0,17,178	0/0:15,0:14:11.71:0,12,99	0/0:25,0:25:11.53:0,12,75	0/0:17,0:17:14.10:0,14,70	0/0:6,0:12:2.84:0,3,14	0/0:29,0:29:0:0,0,0	0/1:23,0:23:11.51:153,0,12	0/1:15,6:21:26.02:39,0,26	0/0:12,0:11:4.42:0,4,46	0/0:24,0:24:2.84:0,3,14	./.	./.	0/0:22,0:22:8.33:0,8,55	0/1:18,0:18:12.21:12,0,45	0/0:20,0:18:16.59:0,17,114	0/0:18,0:21:23.76:0,24,218	./.	0/0:17,0:17:5.68:0,6,28	0/0:16,0:14:2.53:0,3,23
chr10	101197206	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTT	C	2828.71	PASS	AB=0.778;AC=17;AF=0.304;AN=56;BaseQRankSum=2.363;DP=564;FS=13.866;HRun=0;HaplotypeScore=335.9844;InbreedingCoeff=0.7690;MQ=54.04;MQ0=24;MQRankSum=-2.446;QD=19.11;ReadPosRankSum=1.389;VQSLOD=0.9502;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:43.07:0,43,3060	1/1:11,0:11:12.04:714,12,0	0/0:15,0:7:9.03:0,9,426	0/0:28,0:18:24.55:0,25,888	0/0:28,0:27:36.03:0,36,2124	0/0:25,0:24:47.58:0,48,3017	0/0:15,0:14:30.28:0,30,1421	1/1:17,0:15:6:80,6,0	0/0:19,0:19:29.10:0,29,1047	0/0:22,0:21:51.18:0,51,4419	0/0:22,0:21:35.33:0,35,2265	0/0:28,0:27:58.93:0,59,3481	0/0:17,0:17:33.11:0,33,3021	0/0:16,0:16:14.73:0,15,539	1/1:9,16:25:3.01:218,3,0	0/0:23,0:23:37.13:0,37,3003	0/0:23,0:21:25.54:0,26,1538	0/0:14,0:12:24.08:0,24,2137	1/1:18,0:17:8.04:369,8,0	1/1:10,15:24:0.88:2,1,0	1/1:16,0:15:6.48:78,6,0	0/0:23,0:22:29.77:0,30,2035	0/0:18,0:18:24.04:0,24,1491	0/0:23,0:20:45.59:0,46,3726	0/0:22,0:22:44.58:0,45,3792	1/1:6,0:6:3:28,3,0	1/1:5,11:16:9.03:603,9,0	0/1:10,4:11:3.95:907,0,4
chr10	101197210	.	CTCTCTCTCTCTCTCTCTCTCTCTCTT	C	2350.71	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=5.621;DP=548;FS=13.225;HRun=0;HaplotypeScore=290.3323;InbreedingCoeff=0.7698;MQ=51.00;MQ0=25;MQRankSum=-2.523;QD=16.79;ReadPosRankSum=1.813;VQSLOD=1.0356;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:40.05:0,40,2370	1/1:3,8:11:12.04:804,12,0	0/0:12,0:6:6.02:0,6,268	0/0:24,0:14:15.05:0,15,451	0/0:27,0:26:33:0,33,1668	0/0:25,0:24:51.81:0,52,2595	0/0:17,0:16:29.32:0,29,1105	1/1:15,0:13:1.82:5,2,0	0/0:19,0:19:26.13:0,26,863	0/0:21,0:20:54.19:0,54,3773	0/0:23,0:22:35.73:0,36,2043	0/0:29,0:28:55.91:0,56,3090	0/0:16,0:16:29.06:0,29,2647	0/0:15,0:15:9.13:0,9,351	1/1:23,0:23:3.01:182,3,0	0/0:23,0:23:31.10:0,31,2445	0/0:24,0:22:28.55:0,29,1336	0/0:12,0:10:21.07:0,21,1740	1/1:16,0:15:2.40:202,2,0	1/1:25,0:24:0.89:2,1,0	1/1:15,0:14:5.97:45,6,0	0/0:24,0:23:32.37:0,32,1916	0/0:17,0:17:18.06:0,18,1306	0/0:23,0:20:45.58:0,46,3259	0/0:22,0:22:51.82:0,52,3469	0/1:4,0:4:0:0,0,0	1/1:16,1:16:9.03:497,9,0	1/1:14,0:11:12.04:772,12,0
chr10	101197234	.	CTT	C	2591.80	PASS	AB=1.000;AC=36;AF=0.692;AN=52;BaseQRankSum=1.669;DP=500;FS=5.072;HRun=3;HaplotypeScore=130.6246;InbreedingCoeff=0.3012;MQ=46.17;MQ0=32;MQRankSum=3.808;QD=6.28;ReadPosRankSum=2.754;VQSLOD=0.4002;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:28:41.61:405,42,0	1/1:9,0:9:11.77:72,12,0	./.	./.	0/1:23,0:21:46.55:47,0,64	0/1:24,0:22:26.70:119,0,27	0/1:16,0:14:2.63:3,0,49	1/1:11,5:14:35.63:246,36,0	0/0:16,0:15:24.62:0,25,148	0/0:22,0:20:8.11:0,8,408	0/1:21,0:19:23.05:23,0,155	1/1:25,0:24:11.57:221,12,0	0/1:19,0:19:44.09:44,0,128	0/1:16,0:16:1.57:2,0,89	1/1:22,0:22:10.80:77,11,0	0/1:18,0:18:25.80:26,0,130	0/0:24,0:22:18.42:0,18,211	0/1:17,0:15:51.01:51,0,84	1/1:16,0:15:38.76:295,39,0	1/1:18,0:18:8.99:75,9,0	1/1:17,0:15:11.68:96,12,0	1/1:19,0:19:22.69:187,23,0	1/1:14,0:14:9.22:59,9,0	1/1:28,0:24:31.31:243,31,0	0/0:24,0:23:11.09:0,11,336	1/1:0,18:18:46.23:296,46,0	1/1:17,0:14:11.79:73,12,0	1/1:10,0:8:17.15:107,17,0
chr10	101198294	.	G	GGTGT	1737.28	PASS	AB=0.889;AC=24;AF=0.480;AN=50;BaseQRankSum=0.880;DP=576;FS=6.071;HRun=0;HaplotypeScore=140.3516;InbreedingCoeff=0.6257;MQ=60.80;MQ0=11;MQRankSum=-2.240;QD=6.71;ReadPosRankSum=-1.547;VQSLOD=1.8536;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:3:0,3,28	1/1:6,0:6:3.01:64,3,0	./.	./.	0/0:21,0:20:4.82:0,5,51	0/0:15,0:15:3.41:0,3,25	0/0:28,0:28:17.61:0,18,174	./.	0/0:13,0:13:8.87:0,9,94	0/0:21,0:21:5.97:0,6,71	0/0:15,0:15:8.90:0,9,138	0/1:23,0:23:0:0,0,0	0/0:16,0:21:14.78:0,15,168	1/1:15,4:21:6.02:138,6,0	1/1:26,0:25:5.42:127,5,0	0/0:14,0:16:6.01:0,6,74	0/0:37,0:38:14.95:0,15,175	0/1:15,5:21:7.17:118,0,7	1/1:13,0:11:12.04:217,12,0	1/1:16,0:17:9.03:156,9,0	1/1:28,0:25:18.02:298,18,0	1/1:26,0:26:5.99:50,6,0	0/0:20,0:19:0.16:0,0,0	1/1:31,0:31:11.97:147,12,0	0/0:16,0:15:17.53:0,18,218	1/1:30,0:30:23.69:292,24,0	1/1:12,0:12:14.98:244,15,0	1/1:5,0:5:3.48:56,3,0
chr10	101199498	.	A	ATGTGTGTGTGTG	3871.35	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=5.072;DP=570;FS=0.502;HRun=0;HaplotypeScore=205.2872;InbreedingCoeff=0.2942;MQ=66.74;MQ0=2;MQRankSum=-9.401;QD=24.66;ReadPosRankSum=-0.239;VQSLOD=2.6392;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:30.44:455,0,30	0/1:14,0:14:68.12:81,0,68	0/0:41,0:16:18.02:0,18,369	0/0:29,0:20:53.92:0,54,1128	0/0:40,0:40:99:0,109,3615	0/0:27,0:27:81.06:0,81,2415	0/0:6,0:6:18.06:0,18,705	0/0:31,0:31:15.50:0,15,777	0/0:18,0:18:54.10:0,54,1864	0/0:17,0:17:51.10:0,51,1488	0/0:34,0:34:99:0,99,3427	1/1:6,0:6:1.36:22,1,0	0/0:29,0:29:81.26:0,81,3091	0/0:19,0:19:57.15:0,57,1771	0/1:13,0:13:1.60:93,0,2	0/1:9,0:9:25.95:396,0,26	0/0:19,0:19:48.12:0,48,1627	0/0:21,0:21:57.14:0,57,1910	0/1:24,0:24:75.20:75,0,674	0/0:33,0:33:86.99:0,87,927	0/1:5,0:5:33.27:34,0,33	1/1:10,5:15:20.47:997,20,0	1/1:2,13:20:17.30:1056,17,0	1/1:5,5:10:9.03:529,9,0	0/0:19,0:19:57.17:0,57,1824	0/1:18,0:18:99:99,0,299	0/0:30,0:30:71.27:0,71,868	0/1:6,0:6:8.32:35,0,8
chr10	101199499	.	C	CGTGTGT	8113.78	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=3.593;DP=615;FS=2.907;HRun=0;HaplotypeScore=156.0424;InbreedingCoeff=0.9365;MQ=63.51;MQ0=2;MQRankSum=-3.558;QD=27.41;ReadPosRankSum=-2.207;VQSLOD=4.5175;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:25:15.83:327,16,0	1/1:3,8:12:27.09:834,27,0	0/0:39,0:16:10.32:0,10,272	0/0:27,0:18:33.07:0,33,600	0/0:39,0:40:98.98:0,99,1989	0/0:26,0:27:57.20:0,57,1170	0/0:6,0:6:18.06:0,18,381	1/1:25,9:38:53.43:1108,53,0	0/0:18,0:18:48.16:0,48,1018	0/0:15,0:18:34:0,34,671	0/0:31,0:33:84.29:0,84,1749	1/1:8,0:8:3:25,3,0	0/0:29,0:29:78.27:0,78,1656	0/0:19,0:19:45.15:0,45,953	1/1:7,9:17:21.07:695,21,0	1/1:12,0:15:15.05:394,15,0	0/0:18,0:20:34.38:0,34,850	0/0:19,0:21:48.16:0,48,995	1/1:9,0:25:39.79:591,40,0	1/1:10,0:35:58.83:772,59,0	1/1:3,2:5:6.02:199,6,0	1/1:22,0:22:24.08:640,24,0	1/1:22,0:22:17.68:471,18,0	1/1:12,0:12:14.91:271,15,0	0/0:19,0:19:45.15:0,45,938	1/1:11,7:21:16.11:806,16,0	1/1:8,0:31:52.22:683,52,0	1/1:3,3:8:9.03:298,9,0
chr10	101200431	.	A	AT	5579.44	PASS	AB=0.554;AC=27;AF=0.482;AN=56;BaseQRankSum=-11.016;DP=495;FS=7.876;HRun=10;HaplotypeScore=56.4029;InbreedingCoeff=0.7646;MQ=73.53;MQ0=0;MQRankSum=-0.518;QD=22.68;ReadPosRankSum=0.528;VQSLOD=5.6283;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:25:56.98:590,57,0	1/1:1,8:9:18.05:192,18,0	0/0:7,0:6:11.94:0,12,93	0/0:16,1:17:7.70:0,8,148	0/0:22,1:23:24.94:0,25,411	0/0:27,0:29:76.92:0,77,619	0/0:20,0:23:66.04:0,66,510	1/1:9,17:27:16.67:517,17,0	0/0:14,0:14:29.95:0,30,246	0/0:20,0:20:53.93:0,54,442	0/0:17,0:17:44.90:0,45,365	1/1:2,16:18:42.11:448,42,0	0/0:15,0:15:44.93:0,45,366	0/0:18,2:20:18.93:0,19,360	1/1:1,16:17:39.10:416,39,0	1/1:1,17:18:45.11:480,45,0	0/0:29,0:29:74.89:0,75,616	0/0:10,0:10:23.97:0,24,197	0/1:3,13:16:28.81:339,0,29	1/1:1,15:16:41.96:409,42,0	0/1:3,10:13:10.17:309,0,10	1/1:0,6:6:12.03:128,12,0	1/1:4,15:19:20.49:418,20,0	1/1:1,15:17:26.90:270,27,0	0/0:25,0:25:71.86:0,72,584	0/1:3,15:18:19.79:425,0,20	1/1:2,19:20:48.12:510,48,0	1/1:0,6:6:12.03:128,12,0
chr10	101200581	.	TG	T	3569.82	PASS	AB=0.885;AC=29;AF=0.518;AN=56;BaseQRankSum=9.465;DP=433;FS=14.044;HRun=10;HaplotypeScore=70.2401;InbreedingCoeff=0.5955;MQ=72.64;MQ0=0;MQRankSum=-0.372;QD=13.73;ReadPosRankSum=4.562;VQSLOD=2.0937;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:13.43:0,13,260	1/1:2,3:5:9:78,9,0	0/1:18,0:10:9.67:10,0,78	0/1:10,0:10:10.83:11,0,64	0/0:18,1:19:1.01:0,1,231	0/0:21,0:21:27.05:0,27,289	0/0:14,1:15:12.97:0,13,317	1/1:10,8:18:17.97:156,18,0	0/0:12,0:12:30.02:0,30,291	0/0:12,0:12:21.02:0,21,214	0/1:12,0:12:19.35:19,0,107	1/1:1,11:12:29.99:260,30,0	0/0:13,0:13:39.02:0,39,381	0/0:9,0:12:26.88:0,27,258	1/1:2,9:11:23.98:208,24,0	0/0:1,0:7:8.69:0,9,48	0/0:26,0:26:57.09:0,57,579	0/0:17,0:17:33.02:0,33,334	1/1:5,23:28:65.86:563,66,0	1/1:14,16:32:54.96:445,55,0	1/1:7,20:27:41.98:364,42,0	1/1:0,5:6:17.03:136,17,0	1/1:5,10:15:29.98:260,30,0	0/1:1,6:7:12.18:135,0,12	0/1:7,1:8:14.03:14,0,80	1/1:10,9:19:29.99:260,30,0	1/1:2,24:26:65.97:573,66,0	1/1:2,3:5:8.99:77,9,0
chr10	101201042	.	G	GAA	11506.57	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-12.703;DP=561;FS=1.077;HRun=8;HaplotypeScore=63.8048;InbreedingCoeff=0.9982;MQ=75.97;MQ0=1;MQRankSum=-1.419;QD=36.76;ReadPosRankSum=-1.701;VQSLOD=4.3563;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:75.26:1193,75,0	1/1:1,6:7:18.06:278,18,0	0/0:24,1:25:45.02:0,45,461	0/0:13,0:12:27.04:0,27,286	0/0:25,0:25:63.16:0,63,700	0/0:21,0:21:54.13:0,54,602	0/0:19,0:19:48.11:0,48,535	1/1:5,32:37:96.33:1510,96,0	0/0:16,0:16:36.05:0,36,401	0/0:25,0:25:66.13:0,66,716	0/0:25,0:25:72.17:0,72,791	1/1:3,20:24:56.68:868,57,0	0/0:13,0:13:36.08:0,36,391	0/0:14,0:14:39.10:0,39,434	1/1:1,19:20:48.16:763,48,0	1/1:1,14:16:39.13:620,39,0	0/0:27,0:27:78.19:0,78,859	0/0:10,0:10:24.06:0,24,266	1/1:2,20:25:65.69:949,66,0	1/1:5,15:22:47.65:712,48,0	1/1:2,21:23:57.19:907,57,0	1/1:2,12:15:35.48:441,35,0	1/1:2,11:14:32.60:476,33,0	1/1:2,11:15:33.10:488,33,0	0/0:15,0:15:45.10:0,45,484	1/1:9,21:31:69.94:1005,70,0	1/1:2,19:21:57.19:895,57,0	1/1:4,10:14:27.06:403,27,0
chr10	101201421	.	TGCA	T	11730.11	PASS	AB=0.524;AC=29;AF=0.518;AN=56;BaseQRankSum=13.334;DP=475;FS=0.395;HRun=0;HaplotypeScore=73.2990;InbreedingCoeff=0.9269;MQ=79.00;MQ0=0;MQRankSum=-3.764;QD=47.68;ReadPosRankSum=-0.510;VQSLOD=6.2832;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:54.18:932,54,0	1/1:0,7:7:18.06:317,18,0	0/0:10,0:10:30.08:0,30,578	0/0:17,0:17:42.07:0,42,906	0/0:28,0:28:81.28:0,81,1915	0/0:24,0:24:72.23:0,72,1656	0/0:11,0:11:33.11:0,33,738	1/1:0,43:44:99:2071,129,0	0/0:11,0:11:33.11:0,33,780	0/0:21,0:21:60.20:0,60,1336	0/0:14,0:14:42.14:0,42,993	1/1:0,10:10:27.09:476,27,0	0/0:19,0:19:54.19:0,54,1275	0/0:13,0:13:39.13:0,39,900	1/1:0,14:14:39.13:687,39,0	1/1:0,17:17:48.16:846,48,0	0/0:27,0:27:81.28:0,81,1915	0/0:15,0:15:45.15:0,45,1061	1/1:0,22:22:66.16:1095,66,0	1/1:0,12:12:36.12:635,36,0	1/1:0,12:12:36.12:632,36,0	1/1:0,13:13:36.12:634,36,0	1/1:1,11:12:30.10:529,30,0	1/1:1,13:14:30.10:529,30,0	0/0:19,0:19:54.19:0,54,1257	0/1:1,10:11:37.86:496,0,38	1/1:0,23:23:66.23:1163,66,0	1/1:0,13:13:39.13:688,39,0
chr10	101202557	.	GTTAAT	G	16425.45	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=17.155;DP=576;FS=2.678;HRun=0;HaplotypeScore=126.8431;InbreedingCoeff=0.9973;MQ=70.48;MQ0=0;MQRankSum=-15.924;QD=56.64;ReadPosRankSum=0.864;VQSLOD=5.6400;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.24:0,69,2191	1/1:0,12:12:27.09:627,27,0	0/0:17,0:17:50.96:0,51,1357	0/0:14,0:14:36.21:0,36,934	0/0:22,0:22:66.23:0,66,2134	0/0:20,0:20:60.21:0,60,1971	0/0:15,0:15:45.12:0,45,1246	1/1:0,28:28:81.13:1577,81,0	0/0:19,0:19:57.18:0,57,1818	0/0:25,0:25:75.26:0,75,2443	0/0:20,0:20:57.20:0,57,1882	1/1:0,20:20:48.16:1114,48,0	0/0:39,0:39:99:0,117,3818	0/0:18,0:18:54.19:0,54,1793	1/1:0,26:26:66.23:1532,66,0	1/1:0,27:27:69.24:1603,69,0	0/0:22,0:22:66.23:0,66,2137	0/0:8,0:8:24.08:0,24,775	1/1:0,16:16:44.92:787,45,0	1/1:0,29:29:81.14:1715,81,0	1/1:0,9:9:18.06:386,18,0	1/1:0,16:16:36.12:811,36,0	1/1:0,20:20:51.16:1185,51,0	1/1:0,13:13:18.06:418,18,0	0/0:24,0:24:72.23:0,72,2282	1/1:0,24:24:72.23:1604,72,0	1/1:0,38:38:96.33:2229,96,0	1/1:0,12:12:36.12:837,36,0
chr10	101202824	.	CAT	C	4561.03	PASS	AB=0.962;AC=28;AF=0.519;AN=54;BaseQRankSum=9.449;DP=345;FS=2.854;HRun=0;HaplotypeScore=55.5296;InbreedingCoeff=0.8124;MQ=75.76;MQ0=0;MQRankSum=-1.833;QD=20.83;ReadPosRankSum=-0.208;VQSLOD=4.3474;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:5:7.80:0,8,55	1/1:1,4:5:15.05:184,15,0	0/1:9,0:8:0:0,0,0	0/0:14,0:10:11.99:0,12,135	0/0:16,1:17:5.21:0,5,578	0/0:13,0:13:39.13:0,39,633	0/0:1,0:1:3.01:0,3,49	1/1:11,23:36:28.97:815,29,0	0/0:9,0:9:18.06:0,18,290	0/0:17,0:17:36.12:0,36,587	0/0:9,0:9:24.07:0,24,367	1/1:0,0:11:31.25:154,31,0	0/1:11,1:12:12.83:13,0,318	0/0:9,0:9:21.06:0,21,318	1/1:6,7:13:27:312,27,0	1/1:6,0:13:25.88:148,26,0	0/0:11,0:11:21.02:0,21,290	0/0:7,0:7:12.04:0,12,196	1/1:6,12:20:41.76:442,42,0	1/1:6,6:12:26.97:285,27,0	1/1:4,9:13:30.08:356,30,0	1/1:5,0:7:5.68:28,6,0	1/1:0,0:4:8.52:42,9,0	./.	0/0:13,0:14:42.12:0,42,634	1/1:4,20:24:63.16:739,63,0	1/1:11,14:24:59.93:674,60,0	1/1:3,12:15:30.09:369,30,0
chr10	101202900	.	AT	A	6378.66	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=9.734;DP=432;FS=2.882;HRun=8;HaplotypeScore=51.8061;InbreedingCoeff=0.9947;MQ=86.14;MQ0=0;MQRankSum=-4.809;QD=26.36;ReadPosRankSum=-0.055;VQSLOD=5.4407;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:21.06:0,21,254	1/1:1,11:12:33.05:319,33,0	0/0:21,0:21:44.79:0,45,442	0/0:11,0:11:25.53:0,26,300	0/0:20,0:20:51.14:0,51,603	0/0:20,0:20:60.16:0,60,711	0/0:10,0:10:30.08:0,30,353	1/1:2,24:26:72.07:678,72,0	0/0:15,0:15:45.14:0,45,544	0/0:11,0:11:33.10:0,33,399	0/0:20,0:20:57.17:0,57,689	1/1:1,10:11:29.99:278,30,0	0/0:8,0:8:18.06:0,18,217	0/0:10,0:10:30.09:0,30,362	1/1:2,20:22:63.08:603,63,0	1/1:0,18:18:54.09:521,54,0	0/0:10,0:10:30.09:0,30,362	0/0:13,0:13:36.11:0,36,435	1/1:1,20:21:60.08:573,60,0	1/1:3,22:26:68.14:643,68,0	1/1:1,5:6:15.02:145,15,0	1/1:1,7:8:21.03:203,21,0	1/1:1,18:19:54.09:521,54,0	1/1:0,11:11:30.05:290,30,0	0/0:14,0:14:42.13:0,42,507	1/1:4,16:20:54.06:510,54,0	1/1:4,30:34:90.12:862,90,0	1/1:0,8:8:24.04:232,24,0
chr10	101207008	.	TG	T	5799.05	PASS	AB=0.917;AC=31;AF=0.574;AN=54;BaseQRankSum=11.874;DP=408;FS=5.261;HRun=9;HaplotypeScore=98.1267;InbreedingCoeff=0.6724;MQ=63.15;MQ0=1;MQRankSum=-9.781;QD=18.41;ReadPosRankSum=2.777;VQSLOD=4.9676;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,29:36:84.02:767,84,0	1/1:1,4:5:12.01:110,12,0	0/1:14,3:11:34.11:34,0,92	0/1:12,0:10:31.32:31,0,32	0/0:8,0:8:6.02:0,6,69	0/0:8,0:8:21:0,21,217	0/0:11,1:12:5.63:0,6,319	1/1:6,17:23:50.95:466,51,0	0/0:7,0:7:18.02:0,18,186	0/0:6,0:6:12.04:0,12,138	0/0:20,0:20:39.10:0,39,433	1/1:1,16:17:48.01:439,48,0	0/0:12,1:13:11.65:0,12,384	0/0:11,0:11:24.07:0,24,277	1/1:3,23:26:63:575,63,0	1/1:2,18:20:51.01:466,51,0	0/1:15,2:17:21.82:22,0,279	0/0:3,0:3:9.02:0,9,98	1/1:4,10:14:32.97:290,33,0	1/1:3,24:28:65.05:582,65,0	1/1:0,7:7:11.97:110,12,0	1/1:0,15:15:42.02:384,42,0	1/1:5,20:25:56.97:517,57,0	1/1:0,11:11:21.01:192,21,0	0/0:5,0:5:3.01:0,3,35	1/1:6,13:19:7.26:322,7,0	1/1:4,18:22:53.99:493,54,0	./.
chr10	101207020	.	TG	T	5925.44	PASS	AB=1.000;AC=29;AF=0.537;AN=54;BaseQRankSum=11.681;DP=389;FS=2.078;HRun=7;HaplotypeScore=98.3772;InbreedingCoeff=0.8538;MQ=61.85;MQ0=1;MQRankSum=-10.561;QD=21.01;ReadPosRankSum=1.916;VQSLOD=4.2306;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:36:90.86:853,91,0	1/1:0,5:5:14.99:142,15,0	0/1:20,0:13:1.93:2,0,221	0/0:11,0:9:15.62:0,16,185	0/0:3,0:3:6.02:0,6,75	0/0:5,0:5:9.03:0,9,113	0/0:15,0:15:39.12:0,39,485	1/1:5,14:19:42.09:428,42,0	0/0:6,0:6:18.06:0,18,226	0/0:6,0:6:18.06:0,18,226	0/0:18,0:18:39.12:0,39,485	1/1:1,17:18:51.03:496,51,0	0/0:14,0:14:36.11:0,36,449	0/0:11,0:11:27.08:0,27,339	1/1:4,23:27:69.08:692,69,0	1/1:2,17:19:51.10:514,51,0	0/0:13,0:13:36.12:0,36,452	0/0:3,0:3:6.02:0,6,76	1/1:5,10:15:30.02:289,30,0	1/1:7,21:28:60.76:563,61,0	1/1:3,5:8:8.95:83,9,0	1/1:1,15:16:41.90:390,42,0	1/1:3,20:23:56.93:524,57,0	1/1:3,8:11:18.04:183,18,0	0/0:2,0:2:6.02:0,6,75	1/1:4,12:16:1.32:320,1,0	1/1:3,18:21:44.78:446,45,0	./.
chr10	101209156	.	TACACACACAC	T	667.23	PASS	AB=0.849;AC=15;AF=0.288;AN=52;BaseQRankSum=2.766;DP=538;FS=2.456;HRun=0;HaplotypeScore=153.0926;InbreedingCoeff=-0.0103;MQ=68.88;MQ0=9;MQRankSum=-1.710;QD=2.93;ReadPosRankSum=-0.167;VQSLOD=2.2330;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:15.03:0,15,339	0/1:6,0:7:1.55:2,0,46	./.	./.	0/0:14,0:15:9.01:0,9,116	0/0:23,0:22:27.05:0,27,906	0/0:21,0:21:24.05:0,24,725	0/0:26,0:25:2.92:0,3,17	0/0:16,0:15:17.72:0,18,507	0/0:24,0:24:39.12:0,39,1086	0/0:13,0:13:9.03:0,9,390	1/1:23,0:25:0.79:152,1,0	0/0:17,0:16:20.95:0,21,553	0/0:16,0:16:18.04:0,18,551	0/1:11,1:16:31.05:76,0,31	0/1:18,2:20:89.87:156,0,90	0/0:17,0:17:30.02:0,30,812	0/0:20,0:20:30.05:0,30,894	0/0:17,0:17:2.97:0,3,9	0/1:8,7:15:26.04:80,0,26	0/1:35,0:34:27.12:27,0,40	1/1:14,0:14:4.48:61,4,0	0/1:15,3:17:26.34:26,0,41	0/1:17,12:30:28.89:29,0,34	0/0:11,0:11:11.72:0,12,273	0/1:20,0:18:32.63:39,0,33	1/1:13,3:15:2.72:88,3,0	0/1:10,2:12:50.19:77,0,50
chr10	101210142	.	TAC	T	4112.93	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.762;DP=971;FS=3.363;HRun=0;HaplotypeScore=117.9848;InbreedingCoeff=1.0000;MQ=66.86;MQ0=5;MQRankSum=-0.402;QD=30.02;ReadPosRankSum=4.653;VQSLOD=5.7075;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:99:0,108,1837	0/0:18,0:18:51.17:0,51,877	0/0:44,0:28:44.43:0,44,848	0/0:38,0:25:47.87:0,48,625	0/0:28,0:28:81.26:0,81,1356	0/0:40,0:40:99:0,111,1799	0/0:23,0:23:60.17:0,60,973	0/0:43,0:43:99:0,111,1854	0/0:36,0:36:99:0,108,1797	0/0:41,0:41:99:0,117,1908	0/0:26,0:26:75.24:0,75,1248	1/1:2,39:39:93.31:1238,93,0	0/0:48,0:48:99:0,141,2335	0/0:37,0:37:99:0,105,1774	0/0:48,0:47:99:0,123,1998	0/0:35,0:35:96.28:0,96,1568	0/0:17,0:17:42.09:0,42,661	0/0:15,0:15:42.14:0,42,713	0/0:22,0:22:57.19:0,57,970	0/0:37,0:37:99:0,108,1779	0/0:70,0:70:99:0,193,3203	1/1:2,38:40:96.32:1278,96,0	1/1:0,24:24:56.93:758,57,0	1/1:4,28:32:63.21:838,63,0	0/0:31,0:31:87.28:0,87,1479	0/0:29,0:29:84.27:0,84,1421	0/0:47,0:47:99:0,129,2186	0/0:18,0:18:42.05:0,42,646
chr10	101210903	.	ATTGT	A	6453.84	PASS	AB=0.610;AC=17;AF=0.304;AN=56;BaseQRankSum=9.316;DP=643;FS=3.322;HRun=0;HaplotypeScore=138.4035;InbreedingCoeff=0.9129;MQ=73.18;MQ0=1;MQRankSum=1.317;QD=30.30;ReadPosRankSum=2.030;VQSLOD=5.0852;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:26:43.29:0,43,704	1/1:0,10:10:30.10:493,30,0	0/0:35,0:32:42.12:0,42,836	0/0:31,0:30:51.11:0,51,947	0/0:29,1:30:17.79:0,18,1486	0/0:34,0:34:75.24:0,75,1782	0/0:11,0:11:24.08:0,24,586	1/1:15,12:27:36.10:544,36,0	0/0:27,0:27:66.23:0,66,1560	0/0:16,0:16:45.15:0,45,1044	0/0:27,0:27:60.18:0,60,1407	0/0:9,0:17:33.11:0,33,635	0/0:22,0:22:42.14:0,42,992	0/0:19,0:19:42.14:0,42,1023	1/1:1,26:27:66.23:1085,66,0	0/0:20,0:28:57.19:0,57,1110	0/0:15,0:15:42.14:0,42,995	0/0:14,0:14:33.11:0,33,804	1/1:13,12:25:36.10:540,36,0	1/1:4,14:18:42.14:690,42,0	1/1:13,16:29:40.38:687,40,0	0/0:10,0:18:36.12:0,36,633	0/0:13,0:25:48.15:0,48,799	0/0:5,0:14:21.54:0,22,352	0/0:20,0:20:50.91:0,51,1157	0/1:9,16:25:22.10:738,0,22	1/1:9,28:37:81.28:1331,81,0	1/1:5,10:15:21.07:345,21,0
chr10	101211007	.	T	TA	1991.39	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-0.385;DP=630;FS=7.835;HRun=6;HaplotypeScore=71.4017;InbreedingCoeff=0.9811;MQ=83.64;MQ0=0;MQRankSum=0.370;QD=28.45;ReadPosRankSum=0.428;VQSLOD=4.1653;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:72.06:0,72,712	0/0:8,0:8:21.04:0,21,214	0/0:18,0:18:37.30:0,37,357	0/0:22,0:21:38:0,38,409	0/0:32,0:32:87.19:0,87,888	0/0:23,0:23:57.12:0,57,581	0/0:14,0:14:42.10:0,42,428	0/0:38,0:38:90.17:0,90,903	0/0:28,0:28:75.15:0,75,757	0/0:29,0:29:75.16:0,75,765	0/0:29,0:29:78.18:0,78,795	1/1:3,14:17:39.12:491,39,0	0/0:29,0:29:81.18:0,81,826	0/0:20,0:20:57.13:0,57,581	0/0:26,0:26:72.16:0,72,735	0/0:28,0:28:78.16:0,78,788	0/0:21,0:21:60.11:0,60,603	0/0:10,0:10:24.05:0,24,245	0/0:27,0:27:72.16:0,72,734	0/0:25,0:25:66.15:0,66,673	0/0:22,0:22:60.14:0,60,612	1/1:2,25:27:72.23:906,72,0	1/1:2,13:15:39.12:491,39,0	1/1:0,11:11:21.07:264,21,0	0/0:17,0:17:51.12:0,51,520	0/0:29,0:29:87.19:0,87,882	0/0:33,0:33:96.22:0,96,979	0/0:3,0:3:9.02:0,9,92
chr10	101215014	.	TG	T	6567.61	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.458;DP=632;FS=6.097;HRun=3;HaplotypeScore=64.6543;InbreedingCoeff=0.9991;MQ=88.64;MQ0=0;MQRankSum=-3.686;QD=34.03;ReadPosRankSum=-1.421;VQSLOD=4.7015;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1591	1/1:0,7:7:21.07:260,21,0	0/0:23,0:23:60.17:0,60,800	0/0:23,0:23:28.71:0,29,661	0/0:32,0:32:96.31:0,96,1353	0/0:22,0:22:66.22:0,66,950	0/0:27,0:27:81.26:0,81,1147	1/1:2,30:32:90.24:1078,90,0	0/0:30,0:30:87.28:0,87,1232	0/0:23,0:23:66.22:0,66,945	0/0:32,0:32:96.28:0,96,1328	0/0:14,0:14:42.13:0,42,586	0/0:23,0:23:69.20:0,69,945	0/0:26,0:26:78.24:0,78,1102	1/1:3,29:32:81.25:1005,81,0	0/0:14,0:14:42.14:0,42,605	0/0:18,0:18:48.15:0,48,674	0/0:13,0:13:36.12:0,36,517	1/1:1,14:15:42.13:521,42,0	1/1:1,29:30:84.26:1027,84,0	1/1:0,16:16:45.14:558,45,0	0/0:25,0:25:75.23:0,75,1042	0/0:19,0:19:54.18:0,54,777	0/0:12,0:12:36.12:0,36,518	0/0:24,0:24:72.24:0,72,1037	1/1:0,18:18:54.17:669,54,0	1/1:1,30:31:87.27:1079,87,0	1/1:0,12:12:30.09:372,30,0
chr10	101216607	.	GT	G	748.86	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.350;DP=543;FS=0.000;HRun=6;HaplotypeScore=86.2963;InbreedingCoeff=0.9786;MQ=71.07;MQ0=0;MQRankSum=-1.770;QD=22.69;ReadPosRankSum=1.240;VQSLOD=2.7793;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:42.11:451,42,0	0/0:7,0:7:18.06:0,18,237	0/0:12,0:12:36.12:0,36,466	0/0:4,0:4:11.97:0,12,132	0/0:26,0:26:72.23:0,72,947	0/0:21,0:21:63.20:0,63,829	0/0:15,0:15:36.11:0,36,460	0/0:37,0:37:93.30:0,93,1219	0/0:16,0:16:45.13:0,45,577	0/0:26,0:26:75.23:0,75,972	0/0:25,0:25:72.23:0,72,947	0/0:15,0:15:42.14:0,42,553	0/0:25,0:25:72.23:0,72,947	0/0:15,0:15:45.13:0,45,576	0/0:14,0:14:36.12:0,36,474	1/1:2,14:16:39.10:419,39,0	0/0:17,0:17:51.17:0,51,671	0/0:22,0:22:66.21:0,66,868	0/0:17,0:17:45.15:0,45,592	0/0:31,0:31:90.27:0,90,1154	0/0:12,0:12:36.12:0,36,474	0/0:11,0:11:33.11:0,33,434	0/0:28,0:28:84.26:0,84,1088	0/0:8,0:8:24.08:0,24,314	0/0:30,0:30:87.28:0,87,1143	0/0:22,0:22:60.18:0,60,776	0/0:34,0:34:93.28:0,93,1194	0/0:20,0:20:57.19:0,57,750
chr10	101216987	.	A	AT	6356.88	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-14.749;DP=629;FS=5.644;HRun=6;HaplotypeScore=61.4746;InbreedingCoeff=0.9986;MQ=73.29;MQ0=0;MQRankSum=0.660;QD=32.77;ReadPosRankSum=-1.172;VQSLOD=4.6839;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:92.40:0,92,919	1/1:0,11:11:21.07:264,21,0	0/0:20,0:20:38.91:0,39,393	0/0:19,0:17:21.08:0,21,291	0/0:33,0:33:96.21:0,96,979	0/0:29,0:29:87.20:0,87,887	0/0:16,0:16:45.07:0,45,445	1/1:2,27:29:75.24:941,75,0	0/0:14,0:14:42.10:0,42,429	0/0:24,0:25:62.16:0,62,613	0/0:25,0:25:69.16:0,69,704	0/0:34,0:34:99:0,102,1032	0/0:28,0:27:78.17:0,78,796	0/0:28,0:28:81.15:0,81,812	1/1:1,19:20:60.19:750,60,0	0/0:20,0:20:60.14:0,60,612	0/0:15,0:15:36.08:0,36,367	0/0:15,0:15:39.08:0,39,394	1/1:3,19:22:40.94:730,41,0	1/1:3,28:31:67.81:1035,68,0	1/1:3,17:20:48.15:604,48,0	0/0:18,0:18:51.12:0,51,520	0/0:17,0:17:45.10:0,45,459	0/0:20,0:20:57.13:0,57,582	0/0:23,0:23:66.15:0,66,673	1/1:2,21:23:60.19:750,60,0	1/1:2,26:28:72.23:905,72,0	1/1:0,10:10:30.10:377,30,0
chr10	101218109	.	T	TA	3851.44	PASS	AB=0.619;AC=17;AF=0.304;AN=56;BaseQRankSum=-10.960;DP=575;FS=13.660;HRun=10;HaplotypeScore=65.8992;InbreedingCoeff=0.8908;MQ=72.93;MQ0=0;MQRankSum=-0.726;QD=20.71;ReadPosRankSum=-4.146;VQSLOD=1.9682;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:71.82:0,72,583	1/1:1,8:9:15.04:160,15,0	0/0:16,0:15:22.73:0,23,173	0/0:4,0:4:8:0,8,51	0/0:31,0:31:68.90:0,69,566	0/0:22,0:22:47.92:0,48,394	0/0:19,0:19:47.94:0,48,394	1/1:11,22:34:10.92:553,11,0	0/0:13,0:14:37.98:0,38,301	0/0:24,0:24:33.37:0,33,439	0/0:24,0:24:62.90:0,63,514	0/0:23,0:23:59.92:0,60,493	0/0:18,0:18:44.92:0,45,369	0/0:21,0:21:53.92:0,54,443	1/1:3,19:22:32.48:551,32,0	0/0:3,0:20:30.55:0,31,88	0/0:22,0:22:50.91:0,51,419	0/0:15,0:15:29.92:0,30,246	1/1:2,17:19:51.12:536,51,0	1/1:5,25:31:65.93:662,66,0	0/1:5,8:13:19.20:226,0,19	0/0:17,0:17:47.94:0,48,394	0/0:25,0:25:62.88:0,63,511	0/0:18,0:19:46.96:0,47,375	0/0:28,0:27:74.90:0,75,616	1/1:8,18:27:13.90:556,14,0	1/1:5,16:20:39.10:415,39,0	1/1:3,7:10:18.05:192,18,0
chr10	101219082	.	A	AC	9091.62	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-15.187;DP=632;FS=0.317;HRun=0;HaplotypeScore=55.5071;InbreedingCoeff=0.9945;MQ=85.37;MQ0=0;MQRankSum=-1.684;QD=45.46;ReadPosRankSum=-1.264;VQSLOD=4.4181;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.27:0,93,1277	1/1:1,8:9:24.08:381,24,0	0/0:26,0:26:78.16:0,78,1001	0/0:16,0:16:48.05:0,48,608	0/0:41,0:41:99:0,123,1681	0/0:36,0:36:99:0,108,1474	0/0:11,0:11:33.11:0,33,461	1/1:0,27:27:81.22:1202,81,0	0/0:15,0:15:42.10:0,42,565	0/0:20,0:20:54.18:0,54,742	0/0:20,0:20:57.19:0,57,797	0/0:24,0:24:69.23:0,69,960	0/0:25,0:25:75.25:0,75,1048	0/0:35,0:35:99:0,102,1410	1/1:0,15:15:42.14:671,42,0	0/0:22,0:22:66.21:0,66,904	0/0:20,0:20:60.20:0,60,838	0/0:8,0:8:24.08:0,24,335	1/1:1,27:28:81.26:1262,81,0	1/1:0,29:29:87.30:1374,87,0	1/1:0,30:30:81.28:1294,81,0	0/0:20,0:20:60.17:0,60,805	0/0:24,0:24:72.21:0,72,972	0/0:14,0:14:39.13:0,39,545	0/0:24,0:24:72.24:0,72,1007	1/1:0,19:19:57.19:903,57,0	1/1:0,38:38:99:1814,114,0	1/1:0,5:5:12.04:192,12,0
chr10	101219364	.	AC	A	6448.75	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=18.452;DP=625;FS=3.825;HRun=2;HaplotypeScore=91.1380;InbreedingCoeff=0.9421;MQ=96.04;MQ0=0;MQRankSum=-4.264;QD=35.63;ReadPosRankSum=1.105;VQSLOD=5.2643;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.28:0,87,1281	1/1:0,14:14:39.13:506,39,0	0/0:29,0:29:78.23:0,78,1114	0/0:30,0:30:78.26:0,78,1158	0/0:39,0:39:99:0,117,1711	0/0:23,0:23:69.23:0,69,1034	0/0:21,0:21:63.20:0,63,923	1/1:1,22:23:66.20:844,66,0	0/0:30,0:30:90.28:0,90,1305	0/0:21,0:21:60.20:0,60,899	0/0:23,0:23:69.18:0,69,954	0/0:25,0:25:75.25:0,75,1115	0/0:22,0:22:66.22:0,66,985	0/0:16,0:16:48.16:0,48,719	1/1:0,28:28:81.26:1050,81,0	0/0:19,0:19:54.17:0,54,790	0/0:28,0:28:84.27:0,84,1237	0/0:11,0:11:33.08:0,33,453	1/1:1,21:22:63.19:801,63,0	1/1:0,25:25:69.14:857,69,0	1/1:0,19:19:48.16:623,48,0	0/0:24,0:24:72.23:0,72,1059	0/0:20,0:20:57.19:0,57,854	0/0:18,0:18:54.17:0,54,787	0/0:16,0:16:48.15:0,48,701	1/1:1,15:16:0.15:485,0,0	1/1:0,32:32:93.30:1206,93,0	1/1:0,2:2:6.02:78,6,0
chr10	101219707	.	G	GA	8161.26	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.920;DP=734;FS=2.117;HRun=4;HaplotypeScore=102.9945;InbreedingCoeff=0.9998;MQ=86.73;MQ0=0;MQRankSum=-5.227;QD=37.27;ReadPosRankSum=-1.240;VQSLOD=3.6153;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,1155	1/1:0,12:12:36.12:492,36,0	0/0:24,0:24:62.75:0,63,663	0/0:24,0:26:67.46:0,67,705	0/0:36,0:36:99:0,108,1215	0/0:22,0:22:60.17:0,60,681	0/0:29,0:29:84.24:0,84,953	1/1:4,31:35:99:1329,99,0	0/0:27,0:27:75.21:0,75,851	0/0:30,0:30:78.21:0,78,872	0/0:29,0:29:84.20:0,84,931	0/0:28,0:28:78.22:0,78,885	0/0:26,0:26:69.20:0,69,783	0/0:26,0:26:78.21:0,78,872	1/1:1,32:33:96.32:1313,96,0	0/0:34,0:34:99:0,99,1123	0/0:31,0:31:78.22:0,78,885	0/0:20,0:20:57.14:0,57,635	1/1:6,14:20:51.13:674,51,0	1/1:1,27:28:81.27:1108,81,0	1/1:1,20:21:54.18:739,54,0	0/0:28,0:28:81.23:0,81,919	0/0:21,0:21:63.16:0,63,704	0/0:26,0:26:78.21:0,78,873	0/0:15,0:15:39.11:0,39,442	1/1:1,25:26:75.22:992,75,0	1/1:5,30:35:84.28:1145,84,0	1/1:0,9:9:27.09:369,27,0
chr10	101220565	.	TTG	T	503.04	PASS	AB=0.959;AC=5;AF=0.089;AN=56;BaseQRankSum=3.606;DP=689;FS=5.043;HRun=0;HaplotypeScore=134.9654;InbreedingCoeff=0.2804;MQ=67.54;MQ0=8;MQRankSum=-0.350;QD=6.21;ReadPosRankSum=1.849;VQSLOD=2.7262;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,16:27:42.76:586,43,0	0/1:10,0:9:7.25:7,0,85	0/0:42,0:30:42.55:0,43,587	0/0:33,0:29:41.70:0,42,442	0/0:24,0:25:60.16:0,60,878	0/0:29,0:29:69.23:0,69,1077	0/0:18,0:18:39.11:0,39,595	0/0:37,0:36:45.49:0,45,325	0/0:27,0:27:61.98:0,62,912	0/0:25,0:25:63.16:0,63,954	0/0:29,2:30:39.49:0,39,1106	0/0:25,0:25:57.19:0,57,897	0/0:32,0:32:72.25:0,72,1138	0/1:24,2:26:17.32:17,0,707	0/0:18,0:17:10.36:0,10,113	0/0:10,0:25:60.01:0,60,578	0/0:21,0:21:45.01:0,45,701	0/0:20,0:20:46.36:0,46,689	0/0:27,0:25:33.53:0,34,237	0/0:16,0:15:4.58:0,5,60	0/0:24,0:23:9.54:0,10,53	0/0:23,1:23:28.32:0,28,693	0/1:17,1:17:5.99:6,0,363	0/0:36,0:36:66.20:0,66,1000	0/0:22,0:22:51.17:0,51,812	0/0:24,0:24:38.31:0,38,236	0/0:15,0:14:1.45:0,1,52	0/0:12,0:11:6.64:0,7,80
chr10	101220610	.	A	AGT	4361.01	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-3.673;DP=722;FS=3.668;HRun=0;HaplotypeScore=157.4345;InbreedingCoeff=0.9919;MQ=53.70;MQ0=21;MQRankSum=-3.530;QD=21.81;ReadPosRankSum=-1.962;VQSLOD=5.0286;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:45.14:0,45,558	1/1:3,5:7:19.55:241,20,0	0/0:54,0:20:27.35:0,27,485	0/0:44,0:18:19.86:0,20,268	0/0:28,0:28:69.22:0,69,853	0/0:30,0:30:81.13:0,81,930	0/0:13,0:13:22.47:0,22,361	1/1:25,13:36:57.18:868,57,0	0/0:28,0:29:70.59:0,71,907	0/0:24,0:24:44.19:0,44,570	0/0:17,0:17:41.91:0,42,485	0/0:6,0:37:84.77:0,85,413	0/0:34,0:34:75.21:0,75,914	0/0:25,0:25:60.14:0,60,715	1/1:13,19:31:38.89:627,39,0	0/0:25,0:26:57.01:0,57,683	0/0:24,0:25:54.08:0,54,623	0/0:16,0:16:30.08:0,30,371	1/1:10,12:18:26.87:528,27,0	1/1:9,12:19:21.07:321,21,0	1/1:6,21:27:23.56:379,24,0	0/0:2,0:19:36.52:0,37,177	0/0:1,0:15:31.05:0,31,153	0/0:5,0:40:58.82:0,59,289	0/0:19,0:19:44.92:0,45,546	1/1:15,15:28:21.38:819,21,0	1/1:6,7:12:18.04:357,18,0	1/1:5,4:8:14.92:221,15,0
chr10	101220669	.	CAGAGAGAGAGAG	C	6145.05	PASS	AB=0.600;AC=17;AF=0.304;AN=56;BaseQRankSum=7.570;DP=765;FS=21.224;HRun=0;HaplotypeScore=274.1076;InbreedingCoeff=0.8313;MQ=64.52;MQ0=16;MQRankSum=-9.760;QD=39.14;ReadPosRankSum=-1.196;VQSLOD=2.8545;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:30:84.09:0,84,4334	1/1:0,5:5:3.01:107,3,0	0/0:70,0:29:31.82:0,32,1067	0/0:96,0:51:57.09:0,57,1519	0/0:24,0:24:57.20:0,57,3106	0/0:33,0:33:84.29:0,84,4976	0/0:10,0:10:24.08:0,24,1417	1/1:12,15:27:44.91:1210,45,0	0/0:30,0:31:72.25:0,72,4022	0/0:36,0:41:99:0,105,5632	0/0:9,0:10:27.09:0,27,1324	0/0:38,0:39:38.55:0,39,1442	0/0:37,0:39:99:0,99,5360	0/0:36,0:37:99:0,99,5700	1/1:10,20:30:27.56:909,28,0	0/0:11,0:28:76.80:0,77,3648	0/0:18,0:20:39.13:0,39,2084	0/0:13,0:13:36.12:0,36,2031	1/1:8,2:10:12.02:297,12,0	1/1:9,15:24:21.05:653,21,0	1/1:9,6:15:2.95:62,3,0	0/0:17,0:17:11.57:0,12,523	0/0:22,0:22:10.90:0,11,568	0/0:27,0:27:11.46:0,11,524	0/0:17,0:19:44.46:0,44,2478	0/1:6,12:18:99:1205,0,134	1/1:5,12:17:21.54:752,22,0	1/1:0,11:11:27.09:951,27,0
chr10	101221220	.	AGT	A	6256.25	PASS	AB=0.954;AC=52;AF=0.929;AN=56;BaseQRankSum=-5.685;DP=366;FS=11.040;HRun=0;HaplotypeScore=71.4408;InbreedingCoeff=0.1981;MQ=68.59;MQ0=3;MQRankSum=0.460;QD=17.43;ReadPosRankSum=3.864;VQSLOD=3.9918;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:18:17.04:84,17,0	1/1:1,6:7:9.02:104,9,0	0/1:26,1:11:20.76:21,0,66	0/1:16,1:6:27.30:27,0,46	1/1:1,10:11:15.05:183,15,0	1/1:3,14:17:30.09:367,30,0	1/1:1,4:5:12.04:147,12,0	1/1:10,24:34:40.95:733,41,0	1/1:2,9:11:27.08:330,27,0	1/1:2,9:11:27.08:330,27,0	1/1:4,11:15:24.08:293,24,0	1/1:1,6:7:18.06:220,18,0	1/1:3,6:9:15.05:183,15,0	1/1:0,8:8:21.07:257,21,0	1/1:2,8:10:15.04:177,15,0	0/0:7,0:7:2.99:0,3,24	1/1:7,16:23:33.10:403,33,0	1/1:2,17:19:36.11:433,36,0	1/1:6,7:12:18.06:219,18,0	1/1:7,8:15:7.50:104,8,0	1/1:5,5:9:6.02:73,6,0	1/1:0,4:4:6.02:73,6,0	1/1:1,9:10:21.07:257,21,0	1/1:3,8:11:18.06:220,18,0	1/1:4,10:13:27.08:330,27,0	1/1:4,7:12:12.88:324,13,0	1/1:6,6:12:24.04:275,24,0	1/1:7,2:9:2.31:89,2,0
chr10	101221231	.	G	GTGTA	193.73	PASS	AB=0.990;AC=9;AF=0.161;AN=56;BaseQRankSum=4.115;DP=356;FS=3.675;HRun=0;HaplotypeScore=111.0122;InbreedingCoeff=-0.0156;MQ=63.89;MQ0=4;MQRankSum=-3.998;QD=2.25;ReadPosRankSum=-2.811;VQSLOD=1.0841;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:77.54:94,0,78	0/1:7,0:7:41.04:41,0,41	0/0:26,0:9:20.69:0,21,191	0/0:19,0:5:10.47:0,10,84	0/0:10,0:10:14.30:0,14,102	0/0:16,0:16:31.75:0,32,247	0/0:5,0:5:15.02:0,15,152	0/0:38,0:38:51.81:0,52,560	0/0:10,0:10:29.53:0,30,274	0/0:10,0:10:28.48:0,28,190	0/0:14,0:14:23.01:0,23,179	0/0:6,0:6:18.04:0,18,193	0/0:8,0:8:17.77:0,18,164	0/0:9,0:9:21.82:0,22,182	0/1:11,0:10:34.70:35,0,55	1/1:1,6:7:3.01:81,3,0	0/0:20,0:20:33:0,33,306	0/0:20,0:20:25.26:0,25,297	0/0:15,0:14:17.96:0,18,123	0/1:10,0:10:37.25:37,0,38	0/0:7,0:7:5.75:0,6,44	0/0:4,0:4:5.75:0,6,44	0/0:10,0:10:20.46:0,20,183	0/0:10,0:10:20.51:0,21,170	0/0:13,0:12:27.07:0,27,290	0/1:13,0:13:4.17:4,0,157	0/1:12,0:13:16.79:17,0,157	0/1:9,0:9:18.52:19,0,45
chr10	101221263	.	GTA	G	142.57	PASS	AB=0.891;AC=8;AF=0.167;AN=48;BaseQRankSum=-0.423;DP=269;FS=8.277;HRun=0;HaplotypeScore=82.7108;InbreedingCoeff=-0.1054;MQ=56.68;MQ0=3;MQRankSum=1.085;QD=1.88;ReadPosRankSum=2.601;VQSLOD=0.8661;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:3.01:0,3,42	0/0:5,0:5:3:0,3,25	1/1:11,0:4:0.26:0,0,0	0/0:19,0:5:5.72:0,6,23	0/1:2,1:3:27.14:27,0,81	0/0:8,1:8:15.05:0,15,241	0/0:7,0:7:12.01:0,12,145	0/0:55,0:53:80.99:0,81,513	0/0:8,0:8:9.03:0,9,144	0/0:5,0:5:6.02:0,6,96	0/0:5,0:5:6.02:0,6,96	./.	0/1:8,0:8:23.09:23,0,109	0/0:6,0:6:9.01:0,9,120	0/0:4,0:4:3:0,3,25	0/0:3,0:3:6.02:0,6,95	0/1:16,2:18:84.52:85,0,414	0/1:16,2:19:50.31:50,0,369	0/0:9,0:8:5.88:0,6,36	0/0:8,0:8:5.12:0,5,30	0/0:4,0:4:0:0,0,0	./.	./.	./.	0/1:7,2:10:39.18:63,0,39	0/0:10,0:10:11.98:0,12,123	0/0:11,0:11:17.57:0,18,108	0/1:6,0:6:2.94:3,0,29
chr10	101221273	.	A	ATATATG	2348.34	PASS	AB=0.893;AC=14;AF=0.269;AN=52;BaseQRankSum=0.201;DP=242;FS=4.058;HRun=0;HaplotypeScore=80.3070;InbreedingCoeff=0.4237;MQ=64.36;MQ0=3;MQRankSum=-2.704;QD=17.40;ReadPosRankSum=-3.023;VQSLOD=2.1047;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:2.99:0,3,23	1/1:3,0:4:3.01:100,3,0	0/1:9,0:3:0:0,0,0	0/1:23,0:9:18.56:19,0,37	0/0:3,0:3:9.01:0,9,139	0/0:8,0:7:18.04:0,18,362	0/0:5,0:5:12.04:0,12,250	1/1:51,0:51:16.76:1150,17,0	0/0:4,0:4:9.03:0,9,206	0/0:3,0:3:6.02:0,6,138	0/0:4,0:4:9.02:0,9,163	0/0:3,0:3:3:0,3,25	0/0:5,0:5:12.03:0,12,210	0/0:5,0:5:12.01:0,12,188	1/1:4,0:5:6.01:124,6,0	0/0:4,0:4:9.02:0,9,147	0/0:19,0:19:48.15:0,48,955	0/0:17,0:17:42.11:0,42,779	0/0:6,0:6:5.85:0,6,36	1/1:7,1:9:15:271,15,0	./.	./.	0/0:4,0:4:2.99:0,3,23	0/0:1,0:1:3:0,3,25	0/0:8,0:8:15.02:0,15,210	0/1:6,4:13:75.52:285,0,76	0/1:11,1:12:17.87:196,0,18	1/1:2,5:7:13.60:360,14,0
chr10	101222794	.	CGTGT	C	4079.66	PASS	AB=0.840;AC=21;AF=0.375;AN=56;BaseQRankSum=12.158;DP=760;FS=3.645;HRun=0;HaplotypeScore=187.7630;InbreedingCoeff=0.5715;MQ=60.21;MQ0=10;MQRankSum=-6.976;QD=11.72;ReadPosRankSum=0.746;VQSLOD=3.0443;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,31:39:51.51:774,52,0	1/1:6,3:10:9.37:82,9,0	0/0:22,0:14:5.78:0,6,35	0/0:27,0:10:2.68:0,3,11	0/1:27,3:34:69.30:69,0,1046	0/0:27,0:31:58.56:0,59,980	0/0:30,0:35:56.65:0,57,1030	1/1:20,9:28:29.40:285,29,0	0/1:18,0:20:10.61:11,0,558	0/0:33,1:35:29.23:0,29,1358	0/0:19,0:21:47.33:0,47,756	0/0:27,0:27:60.21:0,60,1113	0/0:27,0:34:71.58:0,72,1364	0/0:25,0:28:50.18:0,50,782	1/1:14,15:32:34.34:487,34,0	0/0:34,0:32:33.11:0,33,552	0/0:30,0:31:62.03:0,62,1221	0/0:12,0:14:13.69:0,14,415	0/1:20,3:22:11.64:149,0,12	1/1:5,16:23:14.62:201,15,0	1/1:34,3:36:10.60:119,11,0	0/1:28,1:31:21.72:22,0,885	0/0:17,0:19:17.08:0,17,547	0/0:38,0:40:72.92:0,73,1332	0/0:13,0:13:30.10:0,30,681	0/1:17,16:34:24.41:801,0,24	1/1:10,15:26:48.08:732,48,0	1/1:1,9:9:24.04:348,24,0
chr10	101222796	.	T	TGC	2705.05	PASS	AB=0.900;AC=25;AF=0.446;AN=56;BaseQRankSum=9.355;DP=755;FS=22.705;HRun=0;HaplotypeScore=172.8141;InbreedingCoeff=0.5773;MQ=58.67;MQ0=11;MQRankSum=-2.541;QD=6.63;ReadPosRankSum=-0.802;VQSLOD=1.4892;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:38:10.97:107,11,0	1/1:10,0:10:20.55:194,21,0	0/0:22,0:13:31.63:0,32,253	0/0:26,0:9:17.30:0,17,132	0/0:35,0:35:76.82:0,77,989	0/0:31,0:31:80.88:0,81,893	0/0:36,0:36:93.50:0,94,1087	1/1:28,0:27:62.68:509,63,0	0/0:19,0:19:48.50:0,48,554	0/0:35,0:35:99:0,99,1221	0/0:20,0:20:53.96:0,54,619	0/1:27,1:28:99:106,0,181	0/0:33,0:33:80.88:0,81,1015	0/0:27,0:27:78.41:0,78,801	1/1:32,0:32:41.13:265,41,0	0/1:4,28:30:42.73:369,0,43	0/0:31,0:31:70.63:0,71,947	0/0:16,0:16:41.16:0,41,423	1/1:24,0:22:16.16:263,16,0	1/1:23,0:23:10.94:89,11,0	1/1:36,0:35:31.90:305,32,0	0/1:30,0:30:87.26:87,0,183	0/1:18,0:18:12.66:13,0,114	0/1:41,0:41:99:100,0,220	0/0:16,0:16:16.25:0,16,478	1/1:33,0:33:11.74:294,12,0	1/1:25,0:25:5.02:201,5,0	1/1:10,0:9:2.66:9,3,0
chr10	101226048	.	C	CTT	1289.49	PASS	AB=0.889;AC=10;AF=0.179;AN=56;BaseQRankSum=0.969;DP=549;FS=16.854;HRun=12;HaplotypeScore=87.9963;InbreedingCoeff=0.7133;MQ=67.34;MQ0=0;MQRankSum=1.658;QD=15.54;ReadPosRankSum=-1.368;VQSLOD=0.5355;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:34:59.52:0,60,580	0/1:5,0:7:0.29:0,0,93	0/1:11,0:10:26.61:27,0,95	0/0:9,0:9:8:0,8,60	0/0:23,0:26:41.20:0,41,395	0/0:17,0:17:45:0,45,416	0/0:10,0:13:23.32:0,23,232	0/0:26,0:28:50.32:0,50,435	0/0:15,0:17:9.11:0,9,260	0/0:20,0:20:29.82:0,30,272	0/0:21,0:23:20.45:0,20,333	1/1:5,7:12:21.03:268,21,0	0/0:18,0:19:15.78:0,16,318	0/0:22,0:26:47.81:0,48,491	0/0:20,0:24:19:0,19,270	0/0:3,0:17:35.83:0,36,170	0/0:24,0:27:56.61:0,57,558	0/0:20,0:20:35.88:0,36,324	0/0:17,0:17:1.01:0,1,196	0/0:27,0:27:33.96:0,34,473	0/0:23,0:23:41.83:0,42,379	1/1:0,3:13:35.68:288,36,0	1/1:0,16:16:31.82:425,32,0	1/1:3,16:24:40.08:443,40,0	0/0:18,0:18:10.97:0,11,255	0/0:16,0:17:10.25:0,10,264	0/0:26,0:27:44.67:0,45,505	0/0:13,0:16:23.42:0,23,300
chr10	101227490	.	A	AT	937.53	PASS	AB=0.833;AC=3;AF=0.054;AN=56;BaseQRankSum=-5.836;DP=549;FS=18.045;HRun=10;HaplotypeScore=62.7229;InbreedingCoeff=0.5658;MQ=71.45;MQ0=0;MQRankSum=-1.181;QD=20.83;ReadPosRankSum=0.240;VQSLOD=2.5861;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,37:40:99:1023,99,0	0/1:4,1:5:20:20,0,62	0/0:12,0:12:23.89:0,24,184	0/0:12,0:12:17.55:0,18,147	0/0:12,0:12:29.95:0,30,246	0/0:30,0:30:86.89:0,87,714	0/0:14,0:14:35.94:0,36,296	0/0:36,0:36:80.87:0,81,663	0/0:19,0:19:53.92:0,54,443	0/0:14,1:16:6.13:0,6,245	0/0:15,0:15:29.92:0,30,246	0/0:24,0:24:53.84:0,54,443	0/0:23,0:24:58.94:0,59,474	0/0:28,0:28:62.83:0,63,516	0/0:20,0:20:56.90:0,57,465	0/0:25,0:25:69.78:0,70,564	0/0:12,0:12:29.94:0,30,246	0/0:5,0:5:11.98:0,12,99	0/0:24,1:27:38.02:0,38,493	0/0:18,0:18:13.44:0,13,313	0/0:24,0:24:62.90:0,63,517	0/0:6,0:6:11.98:0,12,99	0/0:17,0:17:35.22:0,35,294	0/0:24,0:25:55.96:0,56,449	0/0:10,0:10:23.97:0,24,197	0/0:26,0:26:59.90:0,60,490	0/0:34,0:34:80.86:0,81,665	0/0:12,0:12:32.96:0,33,271
chr10	101227776	.	GGTGT	G	72.99	PASS	AB=0.972;AC=9;AF=0.205;AN=44;BaseQRankSum=2.638;DP=133;FS=6.072;HRun=0;HaplotypeScore=25.9921;InbreedingCoeff=0.2147;MQ=56.04;MQ0=13;MQRankSum=-0.679;QD=1.43;ReadPosRankSum=0.659;VQSLOD=0.2497;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,1:9:36.03:36,0,88	./.	0/0:9,0:3:8.24:0,8,152	0/1:25,0:9:38.33:38,0,189	./.	0/0:4,0:3:5.91:0,6,69	./.	0/0:11,0:11:33.01:0,33,351	0/0:4,0:4:8.71:0,9,81	1/1:2,3:3:6.02:94,6,0	0/0:5,0:4:9.03:0,9,198	0/1:7,0:7:0.10:0,0,0	0/0:5,0:4:8.18:0,8,56	0/0:7,0:6:6.41:0,6,93	0/0:7,0:5:12.04:0,12,274	0/0:1,0:1:3.01:0,3,71	./.	1/1:1,0:1:0.89:2,1,0	0/0:3,0:2:6.01:0,6,81	0/0:4,0:2:3.01:0,3,75	1/1:2,0:1:1.25:3,1,0	./.	0/0:3,0:3:6.01:0,6,150	./.	0/0:2,0:2:3.01:0,3,77	0/0:5,0:4:11.98:0,12,132	0/0:4,0:3:2.04:0,2,6	0/0:1,0:1:3.01:0,3,73
chr10	101227791	.	GGATAGATAGATAGATA	G	510.81	PASS	AB=1.000;AC=9;AF=0.563;AN=16;BaseQRankSum=0.597;DP=153;FS=6.154;HRun=0;HaplotypeScore=46.2698;MQ=53.17;MQ0=19;MQRankSum=-1.246;QD=18.92;ReadPosRankSum=-1.663;VQSLOD=0.5695;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:10:3.01:0,3,147	./.	./.	./.	./.	1/1:3,2:4:3.01:129,3,0	./.	./.	1/1:3,2:5:3.01:129,3,0	0/0:5,0:3:6.02:0,6,283	./.	./.	1/1:3,3:5:6.02:258,6,0	1/1:3,0:6:8.99:81,9,0	./.	./.	0/1:5,0:4:0.01:0,0,0	./.	./.	./.	0/0:3,0:2:3.01:0,3,197	./.	./.	./.	./.	./.	./.	./.
chr10	101228254	.	C	CCTT	21111	PASS	AB=0.537;AC=29;AF=0.518;AN=56;BaseQRankSum=-17.004;DP=594;FS=6.544;HRun=0;HaplotypeScore=72.0016;InbreedingCoeff=0.9274;MQ=84.19;MQ0=0;MQRankSum=-5.573;QD=61.73;ReadPosRankSum=2.418;VQSLOD=6.7791;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:24:57.13:1346,57,0	1/1:0,9:9:27.09:664,27,0	0/0:18,0:18:41.99:0,42,679	0/0:22,0:22:60.06:0,60,913	0/0:24,0:24:72.19:0,72,1197	0/0:24,0:24:72.22:0,72,1278	0/0:17,0:17:51.16:0,51,919	1/1:0,34:40:99:2583,120,0	0/0:20,0:20:60.21:0,60,1116	0/0:23,0:23:66.23:0,66,1228	0/0:23,0:23:66.23:0,66,1222	1/1:0,22:24:63.22:1549,63,0	0/0:19,0:19:57.18:0,57,1023	0/0:16,0:16:48.12:0,48,800	1/1:0,27:26:72.25:1772,72,0	1/1:1,26:30:78.27:1916,78,0	0/0:14,0:14:42.14:0,42,781	0/0:7,0:7:18.06:0,18,335	1/1:0,13:17:45.11:870,45,0	1/1:0,26:28:81.11:1760,81,0	1/1:1,10:12:21.07:516,21,0	1/1:0,21:21:60.12:1417,60,0	1/1:0,22:23:59.87:1366,60,0	1/1:0,16:16:45.15:1107,45,0	0/0:25,0:25:75.23:0,75,1333	0/1:3,18:22:19.67:1292,0,20	1/1:0,25:27:72.25:1772,72,0	1/1:1,20:22:48.16:1181,48,0
chr10	101229722	.	TA	T	618.49	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.459;DP=521;FS=3.736;HRun=1;HaplotypeScore=48.6765;InbreedingCoeff=0.9681;MQ=77.20;MQ0=0;MQRankSum=-3.102;QD=34.36;ReadPosRankSum=0.677;VQSLOD=3.3470;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:51.17:0,51,815	0/0:5,0:5:15.05:0,15,240	0/0:18,0:18:39.37:0,39,730	0/0:15,0:15:45.14:0,45,695	0/0:26,0:26:78.23:0,78,1199	0/0:25,0:25:75.24:0,75,1174	0/0:11,0:11:33.11:0,33,528	0/0:36,0:36:99:0,108,1707	0/0:20,0:20:60.17:0,60,912	0/0:26,0:26:78.27:0,78,1244	0/0:20,0:20:57.18:0,57,888	0/0:24,0:24:72.25:0,72,1151	0/0:17,0:17:48.16:0,48,767	0/0:19,0:19:57.19:0,57,911	0/0:26,0:26:78.27:0,78,1247	1/1:0,18:18:51.17:713,51,0	0/0:19,0:19:57.19:0,57,907	0/0:10,0:10:30.10:0,30,479	0/0:14,0:14:39.13:0,39,624	0/0:25,0:25:75.24:0,75,1175	0/0:19,0:19:54.18:0,54,863	0/0:5,0:5:15.05:0,15,240	0/0:14,0:14:42.14:0,42,671	0/0:16,0:16:48.16:0,48,767	0/0:16,0:16:48.15:0,48,745	0/0:16,0:16:48.16:0,48,768	0/0:31,0:31:93.31:0,93,1470	0/0:10,0:10:30.10:0,30,479
chr10	101230793	.	CCTT	C	3512.28	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.979;DP=623;FS=4.295;HRun=0;HaplotypeScore=93.5847;InbreedingCoeff=0.9989;MQ=82.73;MQ0=0;MQRankSum=-2.340;QD=35.84;ReadPosRankSum=3.454;VQSLOD=4.1681;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,2616	0/0:8,0:8:24.07:0,24,508	0/0:16,0:16:42.13:0,42,816	0/0:33,0:34:83.51:0,84,1904	0/0:32,0:32:93.32:0,93,2143	0/0:9,0:9:27.09:0,27,605	0/0:28,0:28:84.28:0,84,1852	0/0:21,0:21:51.18:0,51,1176	0/0:19,0:19:54.17:0,54,1181	0/0:24,0:24:69.24:0,69,1581	0/0:12,0:12:33.11:0,33,759	1/1:1,27:28:72.25:1226,72,0	0/0:28,0:28:84.29:0,84,1920	0/0:17,0:17:45.15:0,45,964	0/0:20,0:20:60.17:0,60,1253	0/0:22,0:22:66.23:0,66,1503	0/0:22,0:22:63.18:0,63,1325	0/0:10,0:10:30.10:0,30,652	0/0:19,0:19:57.18:0,57,1251	0/0:38,0:38:99:0,114,2487	0/0:25,0:25:63.21:0,63,1408	1/1:2,18:20:36.12:600,36,0	1/1:0,25:25:54.66:920,55,0	1/1:0,25:25:45.09:766,45,0	0/0:16,0:16:48.16:0,48,1085	0/0:21,0:21:60.21:0,60,1383	0/0:25,0:25:72.25:0,72,1603	0/0:15,0:15:45.12:0,45,926
chr10	101231201	.	CCTCT	C	680.18	PASS	AB=0.805;AC=20;AF=0.385;AN=52;BaseQRankSum=0.782;DP=553;FS=28.516;HRun=0;HaplotypeScore=97.3619;InbreedingCoeff=0.1494;MQ=69.55;MQ0=27;MQRankSum=-1.869;QD=2.79;ReadPosRankSum=1.068;VQSLOD=0.2570;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:19:0:0,0,0	./.	./.	0/0:69,0:26:0.94:0,1,1	0/0:16,0:18:9.03:0,9,194	0/0:23,0:22:3.01:0,3,71	0/1:12,1:18:25.48:36,0,25	1/1:32,0:32:0.62:35,1,0	0/1:15,0:17:1.13:1,0,418	0/0:12,0:12:13.29:0,13,218	0/1:9,1:11:35.14:35,0,142	0/1:9,1:14:32.91:33,0,35	0/0:11,0:12:9.01:0,9,147	0/0:13,0:14:13.81:0,14,128	1/1:7,3:9:3.01:47,3,0	0/0:10,0:18:8.06:0,8,110	0/1:18,1:20:16.88:17,0,473	0/0:25,0:27:54.85:0,55,1089	1/1:13,5:18:14.32:207,14,0	0/1:16,5:22:6.76:41,0,7	1/1:9,1:11:3.01:47,3,0	0/1:11,1:17:25.51:36,0,26	1/1:14,3:17:3.01:47,3,0	0/0:11,0:11:11.49:0,11,119	0/0:11,0:11:11.99:0,12,209	0/0:19,0:20:4.06:0,4,16	1/1:14,8:22:12.51:188,13,0	0/1:10,1:13:12.94:63,0,13
chr10	101231362	.	CACAGAGAGAGAG	C	4488.79	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-3.042;DP=487;FS=2.706;HRun=0;HaplotypeScore=147.7745;InbreedingCoeff=0.8758;MQ=66.30;MQ0=9;MQRankSum=-2.918;QD=18.94;ReadPosRankSum=1.387;VQSLOD=3.8333;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:26.95:218,27,0	1/1:12,0:12:35.90:291,36,0	0/0:25,0:14:38.75:0,39,357	0/0:27,0:13:30.27:0,30,237	0/0:21,0:20:50.93:0,51,702	0/0:17,0:17:39.47:0,39,985	0/0:20,0:20:56.98:0,57,746	1/1:25,0:25:65.69:583,66,0	0/0:18,0:17:45.02:0,45,1099	0/0:17,0:17:51.09:0,51,1335	0/0:20,0:20:44.97:0,45,692	1/1:22,0:22:53.94:450,54,0	0/0:20,0:20:57.47:0,57,1682	0/0:12,0:12:30.04:0,30,942	1/1:15,0:16:41.72:402,42,0	0/1:14,0:14:99:189,0,129	0/0:13,0:13:24.45:0,24,426	0/0:14,0:14:32.97:0,33,779	1/1:2,6:8:16.50:241,17,0	1/1:2,0:25:12.18:229,12,0	1/1:6,0:6:8.99:75,9,0	1/1:14,0:14:38.95:322,39,0	1/1:15,0:17:44.89:450,45,0	1/1:1,0:13:6.02:191,6,0	0/0:26,0:26:60.05:0,60,1378	1/1:19,0:19:56.85:486,57,0	1/1:0,23:23:2.90:114,3,0	1/1:11,0:11:32.81:248,33,0
chr10	101232447	.	CAGAGAG	C	761.28	PASS	AB=0.986;AC=19;AF=0.380;AN=50;BaseQRankSum=0.744;DP=475;FS=21.522;HRun=0;HaplotypeScore=111.9806;InbreedingCoeff=-0.0297;MQ=39.41;MQ0=41;MQRankSum=3.570;QD=2.80;ReadPosRankSum=0.674;VQSLOD=0.7551;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:15.05:0,15,332	1/1:7,0:6:7.93:101,8,0	./.	./.	0/1:22,0:21:8.62:9,0,65	0/1:25,0:24:28.44:28,0,37	1/1:19,0:16:2.71:32,3,0	0/0:19,0:19:8.69:0,9,48	0/1:17,0:15:7.83:8,0,46	0/1:14,3:16:71.67:100,0,72	0/0:10,0:13:0:0,0,0	0/1:23,0:22:19.32:35,0,19	0/1:10,0:10:1.31:14,0,1	0/0:30,0:26:4.42:0,4,45	1/1:24,0:20:5.98:79,6,0	0/0:23,0:19:0:0,0,1	0/0:24,0:21:9.50:0,10,145	0/0:13,0:9:6.02:0,6,101	0/1:18,0:18:9.52:52,0,10	0/0:7,4:11:2.94:0,3,18	1/1:16,0:11:6.02:103,6,0	./.	0/0:15,0:13:0:0,0,0	0/1:23,0:20:7.02:100,0,7	0/0:15,0:15:6:0,6,82	0/1:24,0:22:47.38:112,0,47	0/1:15,0:12:4.54:38,0,5	0/1:12,0:10:7.97:91,0,8
chr10	101232485	.	GAGAGAGAGAGAC	G	161.52	PASS	AB=1.000;AC=5;AF=0.093;AN=54;BaseQRankSum=3.952;DP=510;FS=1.016;HRun=0;HaplotypeScore=140.3516;InbreedingCoeff=0.4705;MQ=49.65;MQ0=44;MQRankSum=-0.319;QD=2.94;ReadPosRankSum=2.229;VQSLOD=2.7492;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:27.03:0,27,888	0/0:9,0:8:14.99:0,15,156	0/0:24,0:7:7.31:0,7,111	0/0:34,0:15:41.67:0,42,357	0/0:19,0:18:33:0,33,766	0/0:19,0:19:29.95:0,30,613	0/0:23,0:20:36.87:0,37,519	0/0:28,0:28:49.47:0,49,470	0/0:17,0:16:18.03:0,18,446	0/0:13,0:12:23.62:0,24,416	0/0:14,0:13:2.53:0,3,154	1/1:10,3:13:5.95:92,6,0	0/0:13,0:13:26.55:0,27,384	0/0:23,0:19:23.09:0,23,437	0/0:25,0:21:11.83:0,12,628	1/1:21,0:18:2.27:17,2,0	0/0:15,0:15:22.69:0,23,386	0/0:12,0:7:0.69:0,1,331	0/0:14,0:13:32.19:0,32,246	0/0:19,0:19:32.93:0,33,426	0/0:26,0:21:41.90:0,42,361	./.	0/0:9,1:9:0.47:0,0,1	0/1:21,0:18:95.37:156,0,95	0/0:18,0:18:30.30:0,30,456	0/0:22,0:21:56.79:0,57,942	0/0:13,0:11:23.34:0,23,259	0/0:10,0:8:21.65:0,22,262
chr10	101232487	.	GAGAGAGAGAC	G	267.65	PASS	AB=1.000;AC=6;AF=0.111;AN=54;BaseQRankSum=4.138;DP=507;FS=0.000;HRun=0;HaplotypeScore=130.2097;InbreedingCoeff=0.3885;MQ=53.43;MQ0=40;MQRankSum=-0.781;QD=3.72;ReadPosRankSum=3.076;VQSLOD=2.3390;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:27.03:0,27,770	0/0:8,0:8:11.94:0,12,95	0/0:25,0:8:7.31:0,7,111	0/0:38,0:19:53.60:0,54,483	0/0:19,0:18:33:0,33,599	0/0:19,0:19:29.95:0,30,488	0/0:23,0:20:36.45:0,36,418	0/0:29,0:29:42.71:0,43,443	0/0:18,0:17:21.03:0,21,373	0/0:13,0:12:19.91:0,20,293	0/0:13,0:13:2.53:0,3,133	1/1:10,2:12:5.95:111,6,0	0/0:13,0:13:26.49:0,26,287	0/0:23,0:19:23.21:0,23,374	0/1:25,0:21:18.01:18,0,451	1/1:15,0:14:2.86:18,3,0	0/0:15,0:15:21.86:0,22,332	0/0:12,0:7:0.69:0,1,285	0/0:14,0:13:29.45:0,29,198	0/0:19,0:19:32.93:0,33,382	0/0:26,0:21:47.67:0,48,363	./.	0/0:4,6:9:0.47:0,0,1	0/1:20,0:17:55.04:234,0,55	0/0:19,0:19:32.82:0,33,431	0/0:23,0:22:44.65:0,45,681	0/0:14,0:12:24.44:0,24,214	0/0:9,0:8:19.65:0,20,171
chr10	101233782	.	GAAGT	G	873.08	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.286;DP=608;FS=5.007;HRun=0;HaplotypeScore=107.2597;InbreedingCoeff=0.9961;MQ=81.89;MQ0=0;MQRankSum=-3.111;QD=45.95;ReadPosRankSum=0.413;VQSLOD=3.9708;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.26:0,75,1957	0/0:9,0:9:27.09:0,27,729	0/0:19,0:19:47.83:0,48,1158	0/0:16,0:15:39.12:0,39,953	0/0:35,0:35:99:0,99,2624	0/0:30,0:30:87.26:0,87,2250	0/0:14,0:14:39.13:0,39,1053	0/0:37,0:37:99:0,111,2903	0/0:20,0:20:60.21:0,60,1606	0/0:31,0:31:93.30:0,93,2360	0/0:28,0:28:81.26:0,81,2130	0/0:24,0:24:72.23:0,72,1815	0/0:24,0:24:66.23:0,66,1735	0/0:22,0:22:63.22:0,63,1686	0/0:12,0:12:33.11:0,33,891	1/1:1,18:19:51.17:968,51,0	0/0:15,0:15:39.13:0,39,1053	0/0:15,0:15:45.15:0,45,1175	0/0:13,0:13:33.11:0,33,816	0/0:35,0:35:99:0,105,2765	0/0:14,0:14:36.12:0,36,972	0/0:29,0:29:87.27:0,87,2265	0/0:22,0:22:60.21:0,60,1566	0/0:14,0:14:39.13:0,39,946	0/0:24,0:24:69.24:0,69,1863	0/0:23,0:23:69.23:0,69,1771	0/0:30,0:30:90.31:0,90,2354	0/0:8,0:8:24.08:0,24,647
chr10	101233936	.	G	GTT	6073.78	PASS	AB=0.571;AC=17;AF=0.304;AN=56;BaseQRankSum=1.962;DP=523;FS=5.066;HRun=10;HaplotypeScore=88.5828;InbreedingCoeff=0.8920;MQ=68.15;MQ0=0;MQRankSum=-2.608;QD=29.48;ReadPosRankSum=-3.604;VQSLOD=4.3124;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.10:0,48,488	1/1:0,6:7:14.54:188,15,0	0/0:10,0:9:8.98:0,9,90	0/0:12,0:10:11.83:0,12,95	0/0:24,0:24:57.07:0,57,579	0/0:28,0:28:69.05:0,69,686	0/0:9,0:9:21.04:0,21,213	1/1:15,21:37:66.69:983,67,0	0/0:17,0:17:48.11:0,48,488	0/0:17,0:18:50.85:0,51,500	0/0:21,0:21:48.04:0,48,481	0/0:16,0:16:38.93:0,39,381	0/0:17,0:19:38.53:0,39,423	0/0:19,0:21:41.41:0,41,531	1/1:2,10:12:27.09:403,27,0	0/0:18,0:18:52:0,52,519	0/0:16,0:16:42.08:0,42,427	0/0:14,0:14:38.99:0,39,373	1/1:6,17:23:54.14:761,54,0	1/1:4,24:32:86.99:1058,87,0	0/1:2,6:8:49:78,0,49	0/0:20,0:20:58.38:0,58,582	0/0:16,0:16:39.06:0,39,395	0/0:4,0:4:12.03:0,12,122	0/0:17,0:17:42.06:0,42,427	1/1:10,22:35:20.12:903,20,0	1/1:12,19:32:68.66:964,69,0	1/1:2,15:20:53.66:737,54,0
chr10	101235355	.	C	CT	5640.26	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.891;DP=665;FS=16.616;HRun=2;HaplotypeScore=70.0014;InbreedingCoeff=0.9911;MQ=84.65;MQ0=0;MQRankSum=-1.059;QD=40.00;ReadPosRankSum=3.946;VQSLOD=3.2282;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,37:38:99:1555,108,0	0/0:7,0:7:21.04:0,21,245	0/0:27,0:27:78.20:0,78,920	0/0:14,0:14:33.10:0,33,402	0/0:36,0:36:96.28:0,96,1175	0/0:27,0:27:81.24:0,81,990	0/0:18,0:18:48.13:0,48,578	0/0:35,0:35:93.29:0,93,1153	0/0:29,0:29:81.24:0,81,988	0/0:28,0:28:81.25:0,81,990	0/0:26,0:26:75.24:0,75,930	1/1:2,24:26:69.23:994,69,0	0/0:22,0:22:66.19:0,66,806	0/0:12,0:12:36.11:0,36,446	0/0:31,0:31:90.28:0,90,1115	1/1:1,15:16:10.96:611,11,0	0/0:29,0:29:81.21:0,81,970	0/0:22,0:22:63.18:0,63,766	0/0:12,0:12:33.10:0,33,409	0/0:24,0:24:66.19:0,66,806	0/0:28,0:28:84.26:0,84,1041	1/1:0,15:15:39.09:538,39,0	1/1:0,33:33:96.32:1381,96,0	1/1:0,13:13:39.13:562,39,0	0/0:29,0:29:84.26:0,84,1041	0/0:27,0:27:75.24:0,75,927	0/0:30,0:30:90.28:0,90,1115	0/0:11,0:11:33.10:0,33,409
chr10	101235644	.	T	TCAG	5223.56	PASS	AB=0.595;AC=17;AF=0.304;AN=56;BaseQRankSum=-11.467;DP=710;FS=0.907;HRun=0;HaplotypeScore=103.7605;InbreedingCoeff=0.8904;MQ=62.04;MQ0=4;MQRankSum=0.394;QD=27.35;ReadPosRankSum=-1.113;VQSLOD=4.6030;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:66.19:0,66,877	1/1:5,3:8:6.02:120,6,0	0/0:27,0:26:30:0,30,376	0/0:31,0:25:36.11:0,36,479	0/0:25,0:24:36.11:0,36,488	0/0:25,0:25:51.17:0,51,712	0/0:43,0:43:84.27:0,84,1161	1/1:15,6:20:18.06:361,18,0	0/0:18,0:18:36.10:0,36,485	0/0:24,0:24:24.08:0,24,337	0/0:15,0:15:27.05:0,27,357	0/0:31,0:31:63.19:0,63,851	0/0:32,0:32:69.23:0,69,970	0/0:41,0:41:90.28:0,90,1233	1/1:14,23:40:31.44:1270,31,0	0/0:27,0:27:72.21:0,72,976	0/0:32,0:32:80.08:0,80,1101	0/0:27,0:27:63.21:0,63,885	1/1:9,7:17:24.08:445,24,0	1/1:8,3:11:9.03:180,9,0	1/1:15,27:46:81.28:1599,81,0	0/0:9,0:9:9.03:0,9,126	0/0:14,0:14:15.04:0,15,194	0/0:40,0:41:99:0,108,1496	0/0:11,0:11:15.04:0,15,194	1/1:11,7:18:21.05:384,21,0	0/1:8,17:25:3.10:683,0,3	1/1:2,3:5:9.03:181,9,0
chr10	101236455	.	G	GTT	3140.07	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=-4.748;DP=562;FS=0.000;HRun=8;HaplotypeScore=85.2768;InbreedingCoeff=0.8413;MQ=74.28;MQ0=0;MQRankSum=2.308;QD=14.88;ReadPosRankSum=-3.732;VQSLOD=0.6939;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:15.27:76,15,0	1/1:1,8:9:15.93:219,16,0	0/0:25,0:18:20.71:0,21,213	0/1:22,0:17:17.82:18,0,180	0/0:25,0:24:36.61:0,37,400	0/0:12,0:12:30.06:0,30,324	0/0:24,0:24:54.05:0,54,601	1/1:8,18:29:54.10:737,54,0	0/0:24,0:24:35.99:0,36,391	0/0:24,0:24:48:0,48,494	0/0:13,0:13:22.32:0,22,253	0/0:12,0:12:4.35:0,4,48	0/0:27,0:27:44.97:0,45,477	0/0:24,0:24:42.03:0,42,461	1/1:3,19:22:21.02:273,21,0	0/0:28,0:28:35.51:0,36,261	0/0:35,0:35:59.92:0,60,627	0/0:21,0:21:33.04:0,33,366	1/1:6,11:17:33.11:510,33,0	1/1:4,13:19:38.54:481,39,0	1/1:3,20:23:19.88:290,20,0	0/0:11,0:11:10.42:0,10,91	0/1:3,0:4:0:0,0,0	0/0:15,0:15:22.77:0,23,150	0/0:31,0:31:43.36:0,43,498	1/1:6,11:18:33.11:496,33,0	1/1:4,8:14:16.77:226,17,0	1/1:3,0:3:2.99:24,3,0
chr10	101236462	.	T	TGG	147.14	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.183;DP=564;FS=3.351;HRun=0;HaplotypeScore=99.9390;InbreedingCoeff=0.6890;MQ=70.50;MQ0=0;MQRankSum=-2.111;QD=5.26;ReadPosRankSum=-1.276;VQSLOD=2.4196;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:7.43:0,7,73	0/0:9,0:9:11.02:0,11,36	0/0:22,0:15:27.79:0,28,394	0/0:20,0:14:37.22:0,37,459	0/0:25,0:24:69.22:0,69,1019	0/0:13,0:13:36.12:0,36,575	0/0:25,0:25:72.21:0,72,1073	0/0:26,0:26:42.24:0,42,379	0/0:22,0:22:66.13:0,66,960	0/0:26,0:26:69.33:0,69,1028	0/0:14,0:14:34.34:0,34,481	0/0:5,7:18:2.24:0,2,5	0/0:29,0:29:84.65:0,85,1135	0/0:28,0:28:78.01:0,78,1093	0/0:21,0:21:20.93:0,21,129	0/0:28,0:28:63.14:0,63,727	0/0:31,0:31:90.18:0,90,1277	0/0:18,0:18:48.62:0,49,725	0/0:15,0:15:31.37:0,31,209	0/0:18,0:18:26.97:0,27,230	0/0:25,0:25:29.90:0,30,235	1/1:12,0:13:0.25:106,0,0	0/0:7,0:7:0:0,0,0	1/1:13,1:15:12.69:141,13,0	0/0:26,0:26:64.42:0,64,958	0/0:18,0:18:44.27:0,44,385	0/0:15,0:15:23.29:0,23,166	0/0:3,0:3:9.01:0,9,118
chr10	101237579	.	ATG	A	795.36	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.267;DP=601;FS=20.770;HRun=0;HaplotypeScore=82.3493;InbreedingCoeff=0.9464;MQ=62.51;MQ0=3;MQRankSum=1.391;QD=21.50;ReadPosRankSum=3.716;VQSLOD=2.2756;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:57.19:0,57,997	0/0:11,0:11:30.09:0,30,502	0/0:16,0:7:15.02:0,15,189	0/0:13,0:7:11.76:0,12,116	0/0:39,0:39:99:0,117,1928	0/0:23,0:23:66.17:0,66,1055	0/0:14,0:14:39.09:0,39,600	0/0:49,0:49:99:0,114,1799	0/0:19,0:19:51.12:0,51,840	0/0:39,0:39:99:0,114,1858	0/0:22,0:22:66.18:0,66,1071	1/1:0,14:14:24.08:329,24,0	0/0:21,0:21:57.12:0,57,866	0/0:25,0:25:69.18:0,69,1133	0/0:13,0:13:27.08:0,27,449	0/0:15,0:15:39.12:0,39,662	0/0:33,0:33:81.14:0,81,1301	0/0:28,0:28:69.11:0,69,1119	0/0:19,0:19:48.08:0,48,756	0/0:33,0:33:93.29:0,93,1584	0/0:16,0:16:45.15:0,45,791	1/1:0,2:2:6.02:82,6,0	1/1:1,11:11:27.09:370,27,0	1/1:0,8:9:12.03:164,12,0	0/0:21,0:21:63.15:0,63,975	0/0:30,0:30:81.24:0,81,1331	0/0:21,0:21:60.13:0,60,945	0/0:21,0:21:57.13:0,57,917
chr10	101237673	.	G	GTA	5314.68	PASS	AB=0.672;AC=20;AF=0.370;AN=54;BaseQRankSum=-10.719;DP=491;FS=10.635;HRun=0;HaplotypeScore=64.8897;InbreedingCoeff=0.3173;MQ=64.65;MQ0=6;MQRankSum=2.305;QD=22.91;ReadPosRankSum=-0.979;VQSLOD=4.1497;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,16:25:14.43:529,0,14	0/1:4,6:10:15.81:272,0,16	0/1:9,0:3:0:0,0,0	0/0:13,0:6:2.71:0,3,30	0/0:21,0:21:48.13:0,48,576	0/0:23,0:23:57.18:0,57,701	0/0:11,0:12:23.91:0,24,272	1/1:14,24:38:16.60:1031,17,0	0/0:14,0:14:36.09:0,36,428	0/0:27,0:26:66.19:0,66,797	0/0:31,0:31:71.91:0,72,849	1/1:6,0:7:5.05:45,5,0	0/0:19,0:20:47.98:0,48,567	0/0:16,0:16:33.09:0,33,394	1/1:2,13:14:27.09:440,27,0	0/0:15,0:18:41.78:0,42,456	0/0:20,0:19:39.10:0,39,455	0/0:15,0:15:29.52:0,30,337	0/1:14,10:23:74.42:403,0,74	0/1:7,16:23:96.42:569,0,96	1/1:2,5:7:15.05:245,15,0	./.	1/1:1,0:2:2.74:12,3,0	1/1:3,0:3:2.99:24,3,0	0/0:27,0:29:62.80:0,63,687	0/1:9,18:27:10.67:799,0,11	0/1:7,19:26:19.61:722,0,20	0/1:9,7:16:52.74:223,0,53
chr10	101238499	.	C	CA	6997.10	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-14.541;DP=662;FS=1.833;HRun=4;HaplotypeScore=59.2772;InbreedingCoeff=0.9998;MQ=79.37;MQ0=0;MQRankSum=0.318;QD=35.34;ReadPosRankSum=0.021;VQSLOD=5.2339;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.22:0,78,884	1/1:0,17:17:45.15:616,45,0	0/0:15,0:14:38.11:0,38,437	0/0:20,0:20:51.27:0,51,604	0/0:33,0:33:90.21:0,90,991	0/0:30,0:30:81.23:0,81,919	0/0:21,0:21:60.16:0,60,670	1/1:5,24:29:72.24:984,72,0	0/0:18,0:18:54.14:0,54,603	0/0:19,0:19:54.15:0,54,605	0/0:25,0:25:72.19:0,72,807	0/0:22,0:22:63.16:0,63,704	0/0:30,0:30:81.21:0,81,909	0/0:23,0:23:66.15:0,66,727	1/1:4,26:30:78.24:1050,78,0	0/0:28,0:28:81.23:0,81,919	0/0:27,0:27:69.18:0,69,773	0/0:26,0:26:72.20:0,72,817	1/1:2,17:19:51.17:697,51,0	1/1:2,26:28:75.21:1005,75,0	1/1:1,14:14:45.13:597,45,0	0/0:21,0:21:54.14:0,54,603	0/0:26,0:26:78.22:0,78,884	0/0:30,0:30:90.26:0,90,1021	0/0:21,0:21:63.18:0,63,714	1/1:3,28:31:53.20:1063,53,0	1/1:0,13:13:27.09:369,27,0	1/1:0,16:16:45.15:616,45,0
chr10	101239008	.	TGA	T	2848.53	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.545;DP=646;FS=16.594;HRun=0;HaplotypeScore=76.0268;InbreedingCoeff=0.9977;MQ=77.47;MQ0=1;MQRankSum=-2.266;QD=36.06;ReadPosRankSum=1.154;VQSLOD=4.5441;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,154,2794	0/0:7,0:7:21.07:0,21,385	0/0:17,0:17:42.07:0,42,646	0/0:14,0:14:35.60:0,36,555	0/0:28,0:28:75.26:0,75,1365	0/0:27,0:27:81.28:0,81,1480	0/0:21,0:21:63.22:0,63,1150	0/0:32,0:32:90.30:0,90,1612	0/0:23,0:23:69.24:0,69,1265	0/0:36,0:36:99:0,105,1919	0/0:23,0:23:69.22:0,69,1229	1/1:0,22:22:54.05:774,54,0	0/0:20,0:20:57.20:0,57,1037	0/0:15,0:15:39.13:0,39,702	0/0:25,0:25:72.23:0,72,1282	0/0:33,0:33:96.32:0,96,1725	0/0:22,0:22:66.23:0,66,1179	0/0:16,0:16:45.15:0,45,824	0/0:32,0:32:93.32:0,93,1705	0/0:18,0:18:54.19:0,54,976	0/0:20,0:20:60.21:0,60,1099	1/1:1,24:25:69.23:989,69,0	1/1:0,16:16:45.15:645,45,0	1/1:0,16:15:42.14:602,42,0	0/0:22,0:22:63.22:0,63,1150	0/0:31,0:31:84.29:0,84,1539	0/0:26,0:26:75.26:0,75,1375	0/0:7,0:7:21.07:0,21,385
chr10	101239278	.	C	CT	760.66	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.306;DP=651;FS=23.117;HRun=2;HaplotypeScore=102.9551;InbreedingCoeff=0.9771;MQ=61.02;MQ0=30;MQRankSum=0.380;QD=10.56;ReadPosRankSum=-0.868;VQSLOD=0.2952;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:85.55:0,86,916	0/0:8,0:8:21.07:0,21,257	0/0:34,0:23:66.19:0,66,790	0/0:26,0:14:39.09:0,39,445	0/0:19,0:19:51.07:0,51,594	0/0:15,0:15:42.09:0,42,499	0/0:28,0:28:72.10:0,72,832	0/0:42,0:40:99:0,102,1249	0/0:23,0:23:54.03:0,54,624	0/0:26,0:26:66.15:0,66,775	0/0:16,0:16:36.50:0,36,409	1/1:13,2:9:24.07:308,24,0	0/0:21,0:21:57.18:0,57,700	0/0:27,0:27:72.13:0,72,840	0/0:33,0:33:80.02:0,80,704	0/0:31,0:31:93.19:0,93,1099	0/0:26,0:26:72.18:0,72,867	0/0:15,0:15:26.77:0,27,372	0/0:20,0:19:57.13:0,57,681	0/0:18,0:18:47.78:0,48,466	0/0:42,0:41:78.23:0,78,947	1/1:12,10:10:23.94:265,24,0	1/1:13,2:12:8.90:60,9,0	1/1:18,2:16:21.36:283,21,0	0/0:23,0:23:63.14:0,63,747	0/0:23,0:23:69.22:0,69,843	0/0:20,0:20:53.85:0,54,557	0/0:9,0:8:17.91:0,18,169
chr10	101239279	.	TTGTGTGTG	T	2683.14	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=4.942;DP=681;FS=2.206;HRun=0;HaplotypeScore=184.4217;InbreedingCoeff=0.7617;MQ=59.23;MQ0=30;MQRankSum=-5.138;QD=13.02;ReadPosRankSum=-0.302;VQSLOD=2.5974;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:35:31.09:0,31,514	./.	0/0:33,0:22:2.98:0,3,21	0/0:26,0:14:2.96:0,3,19	0/0:18,0:19:27.09:0,27,860	0/0:17,0:18:19.74:0,20,696	0/0:26,0:29:36.12:0,36,1135	0/1:42,0:40:27.37:95,0,27	0/0:21,0:23:42.14:0,42,1465	0/0:25,0:27:45.05:0,45,1376	0/0:14,0:17:27.08:0,27,754	0/0:18,0:12:8.18:0,8,113	0/0:22,0:22:42.14:0,42,1210	0/0:27,0:28:51.15:0,51,1736	1/1:18,11:32:48.15:1029,48,0	0/0:29,0:31:45.15:0,45,1584	0/0:25,0:26:40.95:0,41,1394	0/0:14,0:16:36.09:0,36,1077	1/1:17,4:20:11.02:137,11,0	1/1:9,8:18:21.07:507,21,0	1/1:39,1:40:14.48:229,14,0	0/0:28,0:17:13.27:0,13,458	0/0:12,0:20:2.11:0,2,18	0/0:21,0:18:8.85:0,9,244	0/0:23,0:24:42.13:0,42,1407	1/1:22,0:23:8.99:111,9,0	1/1:14,6:20:29.90:556,30,0	1/1:5,3:8:9.03:203,9,0
chr10	101239369	.	GTT	G	528.05	PASS	AB=0.829;AC=6;AF=0.107;AN=56;BaseQRankSum=8.081;DP=863;FS=6.804;HRun=3;HaplotypeScore=207.4130;InbreedingCoeff=0.5456;MQ=59.88;MQ0=15;MQRankSum=-7.050;QD=5.74;ReadPosRankSum=-0.729;VQSLOD=-0.5581;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,143,2469	0/0:11,0:10:27.08:0,27,488	0/0:46,0:19:33.52:0,34,545	0/0:56,0:24:53.72:0,54,594	0/0:18,0:18:51.15:0,51,913	0/0:22,0:21:63.11:0,63,1069	0/0:38,0:38:99:0,114,1877	0/0:41,0:39:99:0,112,1744	0/0:31,0:31:88.10:0,88,1512	0/0:36,0:36:99:0,99,1746	0/0:21,0:21:63.11:0,63,998	0/1:24,5:25:68.55:102,0,69	0/0:24,0:24:72.22:0,72,1251	0/0:31,0:31:75.82:0,76,1476	0/0:38,0:38:99:0,102,1707	0/0:27,0:27:81.20:0,81,1311	0/0:41,0:39:99:0,99,1849	0/0:27,0:27:22.40:0,22,1056	0/0:31,0:29:84.16:0,84,1307	0/0:24,0:24:54.18:0,54,1176	0/0:62,0:60:99:0,140,2368	0/1:22,7:29:22.11:267,0,22	1/1:10,8:18:10.92:227,11,0	1/1:15,1:16:4.93:55,5,0	0/0:28,0:29:68.28:0,68,1308	0/0:28,0:28:84.17:0,84,1456	0/0:18,0:16:43.84:0,44,793	0/0:13,0:13:20.94:0,21,376
chr10	101239373	.	CTGTCTG	C	456.37	PASS	AB=0.818;AC=4;AF=0.071;AN=56;BaseQRankSum=7.712;DP=868;FS=3.645;HRun=0;HaplotypeScore=260.2464;InbreedingCoeff=-0.0633;MQ=58.07;MQ0=15;MQRankSum=-6.966;QD=5.37;ReadPosRankSum=-0.616;VQSLOD=2.0613;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,156,4755	0/0:11,0:10:30.10:0,30,506	0/0:44,0:17:48.47:0,48,843	0/0:56,0:20:37.36:0,37,646	0/0:17,0:17:51.18:0,51,1749	0/0:24,0:23:66.21:0,66,2048	0/0:42,0:42:99:0,117,3492	0/0:41,0:39:99:0,114,1756	0/0:33,0:33:90.12:0,90,2705	0/0:36,0:36:96.28:0,96,2646	0/0:21,0:21:60.21:0,60,1961	0/1:22,5:23:99:131,0,183	0/0:25,0:25:75.23:0,75,2335	0/0:33,0:33:99:0,99,3156	0/0:38,0:38:99:0,101,1672	0/0:29,0:29:84.10:0,84,2481	0/0:43,0:41:99:0,99,3409	0/0:27,0:27:71.88:0,72,2091	0/0:34,0:32:76.06:0,76,1165	0/0:26,0:26:52.22:0,52,1063	0/0:62,0:60:99:0,153,2522	0/1:20,6:26:99:185,0,159	0/1:9,8:17:16.82:233,0,17	0/1:14,1:15:16.14:16,0,23	0/0:29,0:28:74.54:0,75,2608	0/0:28,0:28:84.14:0,84,1363	0/0:16,0:14:41.85:0,42,668	0/0:10,0:10:24.13:0,24,405
chr10	101239375	.	G	GTGTGTGTGTT	2457.13	PASS	AB=0.938;AC=7;AF=0.125;AN=56;BaseQRankSum=12.026;DP=882;FS=20.840;HRun=0;HaplotypeScore=320.5395;InbreedingCoeff=0.8585;MQ=57.95;MQ0=15;MQRankSum=-10.524;QD=28.57;ReadPosRankSum=-3.244;VQSLOD=1.6461;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,151,4517	0/0:11,0:10:30.08:0,30,740	0/0:46,0:17:46.53:0,47,840	0/0:59,0:21:21.17:0,21,583	0/0:17,0:17:51.18:0,51,1658	0/0:22,0:21:66.21:0,66,1868	0/0:43,0:43:99:0,117,3168	0/0:43,0:41:99:0,120,1906	0/0:33,0:33:92.92:0,93,2477	0/0:35,0:35:96.30:0,96,2538	0/0:20,0:20:60.21:0,60,1752	1/1:26,1:23:51.22:1123,51,0	0/0:25,0:25:75.19:0,75,2146	0/0:33,0:33:99:0,99,2851	0/0:37,0:37:99:0,102,2387	0/0:28,0:28:84.09:0,84,2289	0/0:43,0:41:89.88:0,90,3139	0/0:28,0:28:72.68:0,73,1918	0/0:36,0:34:89.66:0,90,1472	0/0:28,0:28:57.16:0,57,1657	0/0:64,0:62:99:0,158,3254	1/1:25,1:26:67.85:919,68,0	1/1:17,1:18:32.98:528,33,0	0/1:14,1:15:5.83:36,0,6	0/0:29,0:28:75.42:0,75,2403	0/0:29,0:29:84.19:0,84,1991	0/0:17,0:15:42.05:0,42,1044	0/0:11,0:11:9.64:0,10,411
chr10	101239377	.	CTGTG	C	1513.74	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.169;DP=885;FS=25.811;HRun=0;HaplotypeScore=232.2307;InbreedingCoeff=0.9500;MQ=59.77;MQ0=15;MQRankSum=-11.052;QD=17.81;ReadPosRankSum=-2.785;VQSLOD=1.5417;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:60:99:0,157,3510	0/0:11,0:10:30.02:0,30,272	0/0:45,0:18:35.48:0,35,622	0/0:62,0:25:37.26:0,37,417	0/0:17,0:17:51.18:0,51,1278	0/0:22,0:21:63.22:0,63,1522	0/0:44,0:45:99:0,117,2533	0/0:43,0:41:97.73:0,98,852	0/0:32,0:32:84.27:0,84,1974	0/0:35,0:35:78.25:0,78,1779	0/0:20,0:20:57.17:0,57,1370	1/1:10,17:23:61.19:794,61,0	0/0:25,0:25:66.23:0,66,1636	0/0:32,0:32:90.31:0,90,2270	0/0:38,0:38:93.05:0,93,843	0/0:28,0:29:72.03:0,72,1712	0/0:43,0:42:99:0,110,2505	0/0:28,0:28:71.79:0,72,1580	0/0:33,0:31:71.91:0,72,631	0/0:27,0:27:66.51:0,67,599	0/0:66,0:64:99:0,132,1323	1/1:11,14:25:50.57:595,51,0	1/1:12,5:17:22.42:238,22,0	1/1:14,2:16:3.28:38,3,0	0/0:28,0:27:75.73:0,76,1878	0/0:29,0:29:75.02:0,75,674	0/0:17,0:15:40.80:0,41,349	0/0:11,0:11:23.40:0,23,187
chr10	101239379	.	GT	G	9637.81	PASS	AB=0.526;AC=17;AF=0.304;AN=56;BaseQRankSum=7.392;DP=877;FS=16.845;HRun=1;HaplotypeScore=160.7530;InbreedingCoeff=0.8881;MQ=59.73;MQ0=16;MQRankSum=0.038;QD=35.96;ReadPosRankSum=-1.078;VQSLOD=2.3687;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,160,2461	1/1:0,11:10:30.10:420,30,0	0/0:46,0:16:44.82:0,45,640	0/0:61,1:23:48.76:0,49,584	0/0:17,0:17:51.17:0,51,815	0/0:22,0:21:66.22:0,66,1040	0/0:44,0:44:99:0,124,1896	1/1:2,40:40:99:1561,107,0	0/0:31,0:31:90.31:0,90,1418	0/0:35,0:35:99:0,102,1532	0/0:20,0:20:60.20:0,60,940	0/0:27,0:23:33.40:0,33,160	0/0:25,0:25:75.20:0,75,1138	0/0:33,0:33:99:0,99,1539	1/1:1,36:37:98.99:1360,99,0	0/0:29,0:29:81.71:0,82,1220	0/0:44,0:42:99:0,102,1833	0/0:27,0:27:77.78:0,78,1199	1/1:2,29:29:84.23:1142,84,0	1/1:1,25:26:39.37:929,39,0	1/1:4,61:63:99:2168,155,0	0/0:24,0:24:46.39:0,46,296	0/0:17,0:17:5.02:0,5,137	0/0:16,0:16:7.98:0,8,66	0/0:28,0:27:75.71:0,76,1200	1/1:0,29:29:84.28:1169,84,0	1/1:2,15:15:42.14:582,42,0	0/1:1,9:10:14.26:307,0,14
chr10	101239425	.	C	CTG	1373.63	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.472;DP=993;FS=21.812;HRun=0;HaplotypeScore=210.7225;InbreedingCoeff=0.9329;MQ=61.54;MQ0=12;MQRankSum=-8.046;QD=13.08;ReadPosRankSum=-4.858;VQSLOD=0.9152;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:65:99:0,113,559	0/0:14,0:14:39.11:0,39,482	0/0:46,0:25:31:0,31,535	0/0:67,0:41:35.25:0,35,606	0/0:28,0:28:72.17:0,72,860	0/0:26,0:25:58.02:0,58,684	0/0:43,0:43:99:0,113,1402	0/0:49,0:48:99:0,105,1241	0/0:32,0:32:81.21:0,81,988	0/0:40,0:40:99:0,108,1334	0/0:17,0:17:47.35:0,47,566	1/1:16,22:34:18.83:797,19,0	0/0:42,0:42:99:0,111,1378	0/0:38,0:38:99:0,99,1231	0/0:43,0:45:99:0,105,1298	0/0:35,0:34:75.21:0,75,937	0/0:50,0:49:99:0,114,1441	0/0:34,0:34:88.30:0,88,1151	0/0:25,0:23:51.12:0,51,602	0/0:25,0:25:63.13:0,63,744	0/0:75,0:74:99:0,153,1878	1/1:16,15:31:30.10:500,30,0	1/1:5,8:14:12.04:200,12,0	1/1:12,10:22:2.52:23,3,0	0/0:29,0:29:66.07:0,66,785	0/0:36,0:36:99:0,99,1260	0/0:14,0:14:39.09:0,39,468	0/0:9,0:9:21.07:0,21,267
chr10	101239457	.	ATG	A	1510.90	PASS	AB=0.939;AC=10;AF=0.179;AN=56;BaseQRankSum=10.888;DP=933;FS=12.144;HRun=0;HaplotypeScore=162.6076;InbreedingCoeff=0.8396;MQ=58.75;MQ0=9;MQRankSum=-2.442;QD=10.35;ReadPosRankSum=-0.604;VQSLOD=2.7940;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:59:99:0,112,1871	0/0:9,0:9:24.08:0,24,387	0/0:51,0:19:24.03:0,24,310	0/0:50,0:27:39.55:0,40,514	0/0:33,0:33:93.32:0,93,1505	0/0:23,0:22:42.14:0,42,685	0/0:38,0:38:75.18:0,75,1144	0/0:49,0:48:77.63:0,78,1694	0/0:29,0:29:75.24:0,75,1189	0/0:41,0:41:90.14:0,90,1818	0/1:17,1:18:0.81:1,0,485	1/1:7,30:33:62.68:699,63,0	0/0:35,0:35:84.27:0,84,1342	0/0:28,0:28:23.48:0,23,739	0/0:44,0:44:84.25:0,84,1292	0/0:10,0:34:57.02:0,57,565	0/0:50,1:50:80.47:0,80,1809	0/0:33,0:33:63.46:0,63,1174	0/0:23,0:22:45.14:0,45,691	0/1:25,2:27:2.07:2,0,897	0/0:66,1:67:99:0,116,2286	1/1:6,27:32:48.07:557,48,0	1/1:1,10:11:23.91:227,24,0	1/1:7,13:20:13.99:184,14,0	0/0:20,0:21:31.48:0,31,672	0/0:39,0:39:74.05:0,74,1535	0/0:15,1:16:42.10:0,42,645	0/0:10,0:10:21.07:0,21,324
chr10	101240124	.	AT	A	2344.91	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.506;DP=627;FS=0.000;HRun=9;HaplotypeScore=91.7251;InbreedingCoeff=0.9981;MQ=76.25;MQ0=0;MQRankSum=-2.371;QD=21.13;ReadPosRankSum=2.087;VQSLOD=4.0526;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,1:47:92.87:0,93,1305	0/0:10,0:10:30.09:0,30,345	0/0:23,0:22:54.14:0,54,602	0/0:15,0:13:23.99:0,24,256	0/0:19,0:19:48.14:0,48,554	0/0:27,0:27:72.20:0,72,821	0/0:25,0:25:72.19:0,72,812	0/0:27,0:28:72.02:0,72,792	0/0:13,0:13:36.09:0,36,404	0/0:29,1:30:47.74:0,48,788	0/0:17,0:17:48.14:0,48,549	1/1:0,28:28:69.04:631,69,0	0/0:25,0:25:69.19:0,69,785	0/0:16,0:16:48.13:0,48,546	0/0:27,0:27:81.20:0,81,903	0/0:21,0:21:60.18:0,60,692	0/0:20,0:19:54.16:0,54,622	0/0:13,0:13:39.12:0,39,450	0/0:23,0:23:57.14:0,57,637	0/0:14,0:14:42.10:0,42,472	0/0:25,0:25:60.14:0,60,679	1/1:2,17:19:45.02:412,45,0	1/1:3,24:27:63.01:576,63,0	1/1:3,34:37:82.20:886,82,0	0/0:24,0:25:69.02:0,69,764	0/0:18,0:18:51.14:0,51,577	0/0:26,0:26:69.20:0,69,787	0/0:9,0:9:21.06:0,21,242
chr10	101240419	.	CA	C	1373.05	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.779;DP=563;FS=5.070;HRun=8;HaplotypeScore=78.3335;InbreedingCoeff=0.9949;MQ=62.02;MQ0=4;MQRankSum=-3.259;QD=21.45;ReadPosRankSum=-0.332;VQSLOD=3.8356;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:33:67.36:0,67,356	0/0:13,0:13:36.11:0,36,435	0/0:18,0:12:17.39:0,17,232	0/0:23,0:10:20.80:0,21,222	0/0:36,0:36:99:0,105,1257	0/0:16,0:16:45.14:0,45,544	0/0:21,0:21:54.14:0,54,629	0/0:36,0:36:96.23:0,96,1085	0/0:10,0:10:24.06:0,24,280	0/0:27,0:27:75.23:0,75,906	0/0:21,0:21:48.15:0,48,579	1/1:3,15:18:42.06:405,42,0	0/0:25,0:25:63.18:0,63,750	0/0:22,0:22:54.15:0,54,639	0/0:24,0:24:63.19:0,63,761	0/0:13,0:13:36.10:0,36,424	0/0:24,0:24:63.17:0,63,747	0/0:17,0:17:45.07:0,45,511	0/0:22,0:22:57.16:0,57,674	0/0:23,0:22:60.17:0,60,712	0/0:11,0:11:30.09:0,30,362	1/1:3,17:20:51.08:492,51,0	1/1:4,11:14:39:357,39,0	1/1:3,8:11:30.02:279,30,0	0/0:19,0:19:48.10:0,48,552	0/0:12,0:12:33.10:0,33,391	0/0:23,0:23:63.17:0,63,737	0/0:9,0:9:27.07:0,27,313
chr10	101240444	.	CT	C	971.97	PASS	AB=0.833;AC=9;AF=0.161;AN=56;BaseQRankSum=9.847;DP=542;FS=5.336;HRun=10;HaplotypeScore=84.8015;InbreedingCoeff=0.8243;MQ=68.50;MQ0=5;MQRankSum=-6.067;QD=13.50;ReadPosRankSum=2.406;VQSLOD=3.9201;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:23:58.08:0,58,361	0/0:13,0:13:36.10:0,36,398	0/0:34,0:17:22.65:0,23,151	0/0:14,0:7:4.25:0,4,33	0/0:31,0:31:81.19:0,81,876	0/0:15,0:15:36.07:0,36,380	0/0:19,0:19:39.07:0,39,412	0/0:29,0:29:66.13:0,66,689	0/0:9,0:9:24.05:0,24,257	0/0:25,1:26:40.12:0,40,665	0/0:24,0:24:58.02:0,58,621	1/1:6,10:16:38.98:336,39,0	0/0:21,0:21:51.06:0,51,532	0/0:21,0:21:45.11:0,45,490	0/0:18,0:19:44.92:0,45,467	0/0:13,0:13:35.99:0,36,321	0/0:27,0:27:75.04:0,75,809	0/0:17,1:19:19.01:0,19,412	0/0:19,0:19:30.21:0,30,354	0/0:22,0:22:48.11:0,48,520	0/1:8,2:10:25.05:25,0,191	1/1:4,15:19:41.01:342,41,0	1/1:3,16:19:38.91:328,39,0	1/1:2,6:8:11.98:104,12,0	0/0:20,0:20:29.44:0,29,422	0/0:15,0:15:42.11:0,42,464	0/0:21,0:21:38.89:0,39,387	0/0:16,0:16:48.07:0,48,501
chr10	101240455	.	CA	C	303.96	PASS	AB=0.923;AC=10;AF=0.179;AN=56;BaseQRankSum=9.801;DP=534;FS=2.281;HRun=11;HaplotypeScore=83.9037;InbreedingCoeff=0.6985;MQ=67.71;MQ0=6;MQRankSum=-7.234;QD=3.23;ReadPosRankSum=0.928;VQSLOD=0.2016;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,1:22:26.60:0,27,404	0/0:12,0:12:27.04:0,27,278	0/0:42,0:18:24.15:0,24,215	0/0:16,0:7:0.06:0,0,61	0/0:28,0:29:62.99:0,63,652	0/0:13,0:13:29.16:0,29,278	0/0:13,0:14:38.96:0,39,395	0/0:22,0:22:57.14:0,57,602	0/0:8,0:8:20.07:0,20,191	0/0:27,0:27:57.14:0,57,604	0/0:25,0:25:58.92:0,59,611	1/1:16,0:16:17.88:49,18,0	0/0:22,1:23:29.41:0,29,479	0/0:19,0:19:53.91:0,54,543	0/0:17,0:17:29.94:0,30,459	1/1:1,12:13:29.96:246,30,0	0/0:26,0:26:47.86:0,48,699	0/0:18,0:19:53.49:0,53,508	0/0:15,0:15:33.03:0,33,330	0/0:20,0:20:54.13:0,54,567	0/1:8,2:11:22.34:22,0,166	1/1:19,0:19:34:91,34,0	1/1:24,0:24:5.87:48,6,0	0/1:11,0:11:6.13:6,0,12	0/0:21,0:21:53.76:0,54,532	0/0:18,0:18:47.33:0,47,486	0/0:15,0:15:45.02:0,45,446	0/0:16,0:17:44.95:0,45,461
chr10	101240462	.	AAAAAG	A	2608.20	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.129;DP=555;FS=1.122;HRun=0;HaplotypeScore=118.6004;InbreedingCoeff=0.9922;MQ=69.87;MQ0=6;MQRankSum=-9.745;QD=37.80;ReadPosRankSum=0.615;VQSLOD=3.4268;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.08:0,60,1369	0/0:12,0:12:30.08:0,30,749	0/0:47,0:23:44.66:0,45,670	0/0:18,0:9:17.93:0,18,327	0/0:25,0:25:69.19:0,69,1783	0/0:13,0:13:39.13:0,39,946	0/0:13,0:13:39.13:0,39,1097	0/0:25,0:25:69.21:0,69,1704	0/0:10,0:10:23.94:0,24,493	0/0:29,0:29:75.25:0,75,1931	0/0:24,0:24:63.19:0,63,1631	1/1:6,8:14:36.11:621,36,0	0/0:24,0:24:60.07:0,60,1419	0/0:19,0:19:57.17:0,57,1463	0/0:17,0:17:51.08:0,51,1247	0/0:14,0:14:36.11:0,36,577	0/0:24,0:24:72.20:0,72,1835	0/0:20,0:20:60.14:0,60,1462	0/0:15,0:15:36.12:0,36,976	0/0:22,0:22:66.20:0,66,1668	0/0:11,0:11:33.10:0,33,749	1/1:3,17:20:60.10:1018,60,0	1/1:6,18:24:51.12:919,51,0	1/1:2,9:11:14.96:209,15,0	0/0:24,0:24:72.25:0,72,1794	0/0:21,0:21:54.17:0,54,1374	0/0:16,0:16:42.14:0,42,1115	0/0:20,0:20:54.19:0,54,1419
chr10	101240463	.	AAAAG	A	1636.19	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.028;DP=558;FS=1.101;HRun=0;HaplotypeScore=111.4963;InbreedingCoeff=0.9922;MQ=71.40;MQ0=6;MQRankSum=-9.534;QD=24.42;ReadPosRankSum=0.306;VQSLOD=3.6274;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.12:0,60,1172	0/0:12,0:12:30.08:0,30,646	0/0:49,0:25:43.05:0,43,579	0/0:18,0:9:17.95:0,18,279	0/0:25,0:25:69.18:0,69,1515	0/0:13,0:13:39.13:0,39,781	0/0:13,0:13:39.13:0,39,927	0/0:26,0:26:72.19:0,72,1491	0/0:10,0:10:24:0,24,434	0/0:28,0:28:75.22:0,75,1620	0/0:24,0:24:62.95:0,63,1372	1/1:12,1:13:36.09:411,36,0	0/0:24,0:24:60.11:0,60,1213	0/0:20,0:20:60.19:0,60,1306	0/0:18,0:18:54.08:0,54,1095	0/0:14,0:14:36.10:0,36,436	0/0:24,0:24:72.23:0,72,1595	0/0:20,0:20:60.11:0,60,1245	0/0:15,0:15:36.10:0,36,820	0/0:22,0:22:66.22:0,66,1415	0/0:11,0:11:33.08:0,33,615	1/1:17,3:20:60.13:690,60,0	1/1:23,0:23:51.09:553,51,0	1/1:11,0:11:14.96:141,15,0	0/0:24,0:24:72.19:0,72,1475	0/0:21,0:21:37.56:0,38,1151	0/0:17,0:17:45.10:0,45,985	0/0:20,0:20:54.17:0,54,1188
chr10	101241150	.	GTA	G	6572.56	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=15.073;DP=599;FS=10.855;HRun=0;HaplotypeScore=74.3347;InbreedingCoeff=0.8279;MQ=70.01;MQ0=3;MQRankSum=1.553;QD=23.64;ReadPosRankSum=-0.125;VQSLOD=4.3757;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:63.22:0,63,1070	1/1:0,6:6:15.05:197,15,0	0/1:25,0:14:3.60:4,0,102	0/1:28,0:12:12.33:12,0,46	0/0:34,0:34:90.29:0,90,1491	0/0:21,0:21:60.21:0,60,1029	0/0:8,0:8:18.05:0,18,282	1/1:7,35:42:99:1291,102,0	0/0:16,0:16:48.15:0,48,787	0/0:20,0:20:54.18:0,54,923	0/0:18,0:18:42.14:0,42,720	0/0:13,0:13:33.11:0,33,556	0/0:21,0:21:63.19:0,63,1042	0/0:12,0:12:33.11:0,33,562	1/1:2,29:31:72.23:946,72,0	0/0:20,0:20:57.19:0,57,974	0/0:30,0:30:78.27:0,78,1305	0/0:32,0:32:84.24:0,84,1396	1/1:6,16:22:10.19:497,10,0	1/1:4,37:41:84.27:1104,84,0	1/1:1,13:13:27.09:355,27,0	0/0:2,0:2:6.02:0,6,103	0/0:14,0:14:39.13:0,39,660	0/0:2,0:2:6.02:0,6,97	0/0:28,0:28:72.24:0,72,1194	1/1:3,26:29:78.25:1023,78,0	1/1:5,25:30:72.23:946,72,0	1/1:3,7:10:15.05:197,15,0
chr10	101242343	.	ACT	A	1512.85	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.493;DP=624;FS=3.136;HRun=0;HaplotypeScore=71.1106;InbreedingCoeff=0.9989;MQ=82.57;MQ0=0;MQRankSum=-3.284;QD=38.79;ReadPosRankSum=1.538;VQSLOD=5.8422;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:99:1608,105,0	0/0:9,0:9:27.09:0,27,521	0/0:21,0:21:60.18:0,60,1118	0/0:18,0:18:48.13:0,48,886	0/0:20,0:20:60.19:0,60,1125	0/0:24,0:24:72.25:0,72,1391	0/0:31,0:31:87.27:0,87,1615	0/0:28,0:28:78.26:0,78,1476	0/0:20,0:20:60.19:0,60,1126	0/0:23,0:23:69.24:0,69,1327	0/0:18,0:18:51.17:0,51,985	0/0:16,0:16:48.15:0,48,886	0/0:24,0:24:72.25:0,72,1391	0/0:17,0:17:48.16:0,48,924	0/0:24,0:24:72.25:0,72,1373	0/0:40,0:40:99:0,117,2239	0/0:36,0:36:99:0,105,1958	0/0:17,0:17:51.17:0,51,974	0/0:17,0:17:48.16:0,48,923	0/0:23,0:23:66.23:0,66,1266	0/0:20,0:20:57.19:0,57,1069	0/0:20,0:20:60.21:0,60,1138	0/0:15,0:15:45.15:0,45,855	0/0:23,0:23:66.13:0,66,1166	0/0:20,0:20:60.21:0,60,1158	0/0:22,0:22:66.22:0,66,1236	0/0:19,0:18:57.18:0,57,1067	0/0:20,0:20:57.17:0,57,1064
chr10	101243327	.	ACTAC	A	799.13	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.683;DP=719;FS=13.021;HRun=0;HaplotypeScore=120.6494;InbreedingCoeff=0.9996;MQ=90.09;MQ0=0;MQRankSum=-1.392;QD=25.78;ReadPosRankSum=0.668;VQSLOD=2.4646;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:30:48.16:894,48,0	0/0:12,0:12:36.12:0,36,958	0/0:29,0:29:77.58:0,78,1880	0/0:28,0:28:56.32:0,56,1652	0/0:27,0:27:78.24:0,78,1970	0/0:22,0:22:60.19:0,60,1513	0/0:19,0:19:54.19:0,54,1411	0/0:32,0:32:90.29:0,90,2244	0/0:25,0:25:66.09:0,66,1694	0/0:23,0:23:63.22:0,63,1602	0/0:28,0:28:78.25:0,78,1952	0/0:28,0:28:66.23:0,66,1760	0/0:30,0:30:78.25:0,78,1983	0/0:22,0:22:57.20:0,57,1481	0/0:38,0:38:99:0,102,2677	0/0:21,0:21:60.21:0,60,1600	0/0:23,0:23:66.23:0,66,1734	0/0:23,0:23:60.21:0,60,1599	0/0:17,0:17:45.15:0,45,1154	0/0:27,0:27:78.27:0,78,2057	0/0:33,0:33:87.28:0,87,2214	0/0:35,0:35:99:0,99,2545	0/0:25,0:25:69.23:0,69,1746	0/0:24,0:24:72.21:0,72,1809	0/0:28,0:28:78.27:0,78,2055	0/0:34,0:34:99:0,99,2420	0/0:24,0:23:66.23:0,66,1714	0/0:11,0:11:33.07:0,33,683
chr10	101243764	.	GA	G	1548	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.579;DP=592;FS=1.121;HRun=6;HaplotypeScore=54.9391;InbreedingCoeff=0.9514;MQ=58.12;MQ0=0;MQRankSum=0.016;QD=21.80;ReadPosRankSum=0.656;VQSLOD=2.7885;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.28:0,87,1143	0/0:12,0:12:36.09:0,36,456	0/0:6,0:3:2.96:0,3,39	0/0:12,0:10:21.07:0,21,267	0/0:28,0:28:78.25:0,78,1022	0/0:15,0:15:45.15:0,45,592	0/0:22,0:22:54.18:0,54,710	0/0:41,0:41:99:0,102,1318	0/0:18,0:18:54.15:0,54,681	0/0:31,0:31:93.28:0,93,1185	0/0:21,0:21:57.14:0,57,718	1/1:2,17:19:48.12:515,48,0	0/0:21,0:21:54.18:0,54,710	0/0:18,0:18:51.17:0,51,671	0/0:20,0:20:60.20:0,60,789	0/0:15,0:15:45.15:0,45,592	0/0:24,0:24:60.14:0,60,740	0/0:27,0:27:72.23:0,72,945	0/0:22,0:22:60.18:0,60,774	0/0:30,0:30:75.24:0,75,982	0/0:14,0:14:42.11:0,42,521	1/1:3,14:16:33.08:355,33,0	1/1:1,17:18:39.10:419,39,0	1/1:3,14:17:39.09:419,39,0	0/0:32,0:32:87.27:0,87,1132	0/0:20,0:20:57.18:0,57,738	0/0:17,0:16:51.15:0,51,655	0/0:23,0:23:69.22:0,69,908
chr10	101244772	.	AGT	A	798.04	PASS	AB=0.895;AC=17;AF=0.304;AN=56;BaseQRankSum=4.711;DP=769;FS=5.622;HRun=0;HaplotypeScore=107.6235;InbreedingCoeff=-0.2945;MQ=62.91;MQ0=16;MQRankSum=0.603;QD=1.96;ReadPosRankSum=2.224;VQSLOD=1.6472;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:14.83:0,15,109	0/1:11,1:12:15.01:15,0,181	0/0:40,0:25:0.47:0,0,1	0/0:36,0:16:3:0,3,26	0/1:26,1:28:6.38:6,0,367	0/1:26,6:33:99:124,0,413	0/1:28,0:29:22.33:22,0,247	0/0:23,0:23:14.09:0,14,116	0/1:22,3:26:44.07:44,0,366	0/0:33,0:33:26.53:0,27,321	0/1:21,3:24:16.28:16,0,114	0/0:12,0:29:9:0,9,77	0/1:27,2:30:18.59:19,0,308	0/0:21,0:21:0.56:0,1,242	0/1:28,3:32:74.42:74,0,428	1/1:12,10:24:26.73:257,27,0	0/1:17,3:20:35.61:36,0,282	0/0:23,0:22:21.01:0,21,241	0/1:14,2:16:51.07:51,0,118	0/0:25,0:24:17.90:0,18,217	0/1:27,6:33:69.08:69,0,253	0/0:18,0:29:20:0,20,199	0/1:16,2:34:43.51:44,0,112	0/0:12,0:36:38.99:0,39,340	0/0:24,0:31:40.11:0,40,538	0/1:25,2:28:47.14:47,0,265	0/1:18,3:22:83.14:83,0,197	0/1:13,2:15:48.03:48,0,162
chr10	101246848	.	A	AT	11003.29	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-19.045;DP=726;FS=3.698;HRun=1;HaplotypeScore=66.5917;InbreedingCoeff=0.9989;MQ=93.13;MQ0=0;MQRankSum=-2.635;QD=42.32;ReadPosRankSum=0.165;VQSLOD=5.2020;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,41:42:99:1748,117,0	1/1:0,10:10:27.05:380,27,0	0/0:36,0:36:99:0,102,1250	0/0:25,0:25:60.17:0,60,750	0/0:31,0:31:90.29:0,90,1169	0/0:27,0:27:78.25:0,78,1013	0/0:13,0:13:36.10:0,36,452	1/1:0,33:33:99:1463,99,0	0/0:35,0:35:99:0,105,1348	0/0:21,0:21:60.17:0,60,762	0/0:22,0:22:63.20:0,63,817	0/0:22,0:22:57.17:0,57,726	0/0:32,0:32:93.30:0,93,1207	0/0:42,0:42:99:0,123,1572	1/1:0,28:28:81.27:1214,81,0	0/0:16,0:16:45.15:0,45,584	0/0:28,0:28:78.23:0,78,995	0/0:7,0:7:21.07:0,21,273	1/1:1,20:21:60.20:892,60,0	1/1:0,22:22:63.21:944,63,0	1/1:0,35:35:99:1484,99,0	0/0:32,0:32:93.30:0,93,1207	0/0:22,0:22:66.21:0,66,857	0/0:21,0:21:60.16:0,60,749	0/0:34,0:34:99:0,102,1310	1/1:1,31:32:87.29:1304,87,0	1/1:0,28:28:81.27:1214,81,0	1/1:0,9:9:24.08:360,24,0
chr10	101247780	.	AATTT	A	514.53	PASS	AB=1.000;AC=20;AF=0.526;AN=38;BaseQRankSum=5.880;DP=316;FS=2.301;HRun=0;HaplotypeScore=109.9181;InbreedingCoeff=0.6226;MQ=55.32;MQ0=1;MQRankSum=-3.778;QD=3.10;ReadPosRankSum=-0.864;VQSLOD=1.9484;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,3:6:9.02:141,9,0	1/1:7,0:7:3.80:9,4,0	./.	./.	0/0:13,0:13:18.05:0,18,380	1/1:9,9:18:18.06:282,18,0	./.	./.	0/0:6,0:6:6.02:0,6,142	0/0:13,0:13:15.05:0,15,355	0/0:4,0:9:15.04:0,15,235	./.	0/0:6,0:6:6.02:0,6,142	0/0:7,0:7:15.05:0,15,316	0/1:20,0:20:0.02:0,0,0	1/1:8,3:11:9.03:141,9,0	0/0:24,0:24:42.14:0,42,991	./.	1/1:12,0:12:4.36:11,4,0	1/1:27,0:27:1.39:4,1,0	./.	1/1:6,0:7:3:28,3,0	1/1:10,0:12:2.28:27,2,0	./.	0/0:12,0:12:18.06:0,18,426	0/1:17,0:17:0.41:0,0,66	1/1:29,0:29:1.85:7,2,0	./.
chr10	101248196	.	GT	G	6876.69	PASS	AB=0.522;AC=19;AF=0.339;AN=56;BaseQRankSum=18.529;DP=701;FS=1.339;HRun=1;HaplotypeScore=87.2548;InbreedingCoeff=0.9220;MQ=87.03;MQ0=1;MQRankSum=-4.289;QD=31.40;ReadPosRankSum=0.674;VQSLOD=4.5796;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1652	0/1:1,11:12:11.86:358,0,12	0/0:32,0:30:89.11:0,89,1375	0/0:32,0:31:65.11:0,65,1149	0/0:37,0:37:99:0,108,1706	0/0:24,0:24:69.24:0,69,1099	0/0:34,0:34:99:0,102,1601	1/1:9,28:37:97.08:1132,97,0	0/0:29,0:29:87.25:0,87,1321	0/0:25,0:25:75.23:0,75,1151	0/0:21,0:21:63.21:0,63,991	0/0:23,0:23:69.24:0,69,1095	0/0:27,0:27:81.28:0,81,1295	0/0:23,0:23:69.22:0,69,1076	1/1:4,21:25:66.11:783,66,0	0/0:22,0:22:66.22:0,66,1041	0/0:22,0:22:66.20:0,66,1025	1/1:0,8:8:22.31:257,22,0	1/1:0,30:30:90.25:1091,90,0	1/1:2,25:27:67.65:811,68,0	1/1:0,16:16:42.13:508,42,0	0/0:21,0:21:63.21:0,63,1007	0/0:23,0:23:69.20:0,69,1056	0/0:28,0:28:84.26:0,84,1290	0/0:23,0:23:69.21:0,69,1078	1/1:3,20:23:16.98:686,17,0	1/1:2,33:35:84.72:1038,85,0	1/1:0,6:6:18.05:212,18,0
chr10	101249761	.	T	TTTTG	10016.90	PASS	AB=0.615;AC=25;AF=0.446;AN=56;BaseQRankSum=-2.942;DP=648;FS=1.677;HRun=0;HaplotypeScore=122.2212;InbreedingCoeff=0.8863;MQ=67.92;MQ0=0;MQRankSum=-2.821;QD=34.90;ReadPosRankSum=-0.889;VQSLOD=4.9284;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:63.12:0,63,958	1/1:2,10:12:18.06:385,18,0	0/0:21,0:19:15.01:0,15,202	0/0:20,0:15:15.04:0,15,219	0/0:34,0:34:75.25:0,75,1184	0/0:21,0:21:48.16:0,48,773	0/0:25,0:25:50.86:0,51,771	1/1:23,7:32:30.10:678,30,0	0/0:22,0:22:57.19:0,57,915	0/0:22,0:23:48.15:0,48,734	0/0:27,0:27:49.42:0,49,819	0/0:27,0:27:60.20:0,60,966	0/0:28,0:28:63.20:0,63,994	0/0:24,0:24:48.15:0,48,749	1/1:5,21:26:48.16:1158,48,0	0/0:19,0:19:45.15:0,45,725	0/0:20,0:20:16.61:0,17,487	1/1:11,17:29:47.92:1053,48,0	1/1:9,9:18:24.08:579,24,0	1/1:12,22:36:26.78:1550,27,0	1/1:5,10:16:21.07:507,21,0	1/1:5,0:13:18.06:314,18,0	1/1:11,0:27:57.19:957,57,0	1/1:8,0:13:15.05:232,15,0	0/0:23,0:23:51.17:0,51,820	0/1:12,19:32:27.58:1303,0,28	1/1:8,19:29:5.72:1157,6,0	1/1:2,2:4:6.02:145,6,0
chr10	101250234	.	A	ACACACACACT	6092.21	PASS	AB=0.604;AC=21;AF=0.389;AN=54;BaseQRankSum=8.677;DP=1031;FS=23.250;HRun=0;HaplotypeScore=337.4109;InbreedingCoeff=0.8416;MQ=54.13;MQ0=7;MQRankSum=-8.593;QD=17.66;ReadPosRankSum=-5.426;VQSLOD=2.1062;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:50:65.61:0,66,1123	1/1:11,0:11:15.04:364,15,0	0/0:63,0:31:2.10:0,2,534	0/0:48,0:25:12.04:0,12,413	0/0:33,0:33:75.19:0,75,1897	0/0:37,0:37:82.51:0,83,2282	0/0:42,0:42:58.79:0,59,2072	1/1:46,0:44:45.34:1274,45,0	0/0:53,0:53:99:0,132,3302	0/0:50,0:49:99:0,126,3219	0/0:27,0:27:66.19:0,66,1740	0/0:49,0:49:99:0,117,2882	0/0:46,0:45:99:0,120,2855	0/0:45,0:45:93.30:0,93,2379	1/1:39,0:39:14.77:305,15,0	0/0:39,0:38:51.65:0,52,1070	0/0:41,0:41:78.35:0,78,2449	1/1:17,0:17:19.91:407,20,0	1/1:13,1:13:13.85:402,14,0	1/1:10,17:27:9:111,9,0	1/1:64,1:64:0.77:46,1,0	0/1:11,20:32:0:0,0,0	./.	1/1:37,2:38:5.05:394,5,0	0/0:34,0:34:71.87:0,72,1954	1/1:32,0:32:75.18:1887,75,0	1/1:22,0:22:39.05:903,39,0	0/0:3,0:3:2.96:0,3,19
chr10	101250244	.	TCA	T	1631.03	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=7.280;DP=1056;FS=5.308;HRun=0;HaplotypeScore=229.6412;InbreedingCoeff=0.6829;MQ=54.14;MQ0=12;MQRankSum=1.930;QD=10.13;ReadPosRankSum=-1.242;VQSLOD=2.5427;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,36:47:75.54:951,76,0	0/0:12,0:12:16.58:0,17,276	0/0:66,0:30:58.64:0,59,902	0/0:55,0:24:34.98:0,35,552	0/0:33,0:33:90.29:0,90,1477	0/0:38,0:38:90.49:0,90,1522	0/0:41,0:41:92.76:0,93,1723	0/0:47,0:43:71.21:0,71,1039	0/0:54,0:54:99:0,150,2483	0/0:48,0:47:99:0,135,2216	0/0:26,0:26:71.98:0,72,1179	0/0:56,0:56:99:0,148,2412	0/0:46,0:45:99:0,129,2162	0/0:44,0:44:99:0,105,1674	0/0:38,0:38:21.04:0,21,301	1/1:11,32:42:17.71:794,18,0	0/0:40,1:41:99:0,103,1772	0/0:15,0:15:16.18:0,16,262	0/0:17,0:14:30.07:0,30,413	0/0:29,0:29:21.04:0,21,291	0/1:71,0:70:11.99:12,0,63	0/0:32,0:32:12.04:0,12,191	0/0:22,0:22:9:0,9,95	0/0:43,0:42:11.11:0,11,243	0/0:30,0:30:75.19:0,75,1281	0/0:35,0:35:67.37:0,67,886	0/0:23,0:23:29.82:0,30,478	0/0:3,0:3:2.90:0,3,16
chr10	101250284	.	T	TCA	1264.95	PASS	AB=0.608;AC=3;AF=0.054;AN=56;BaseQRankSum=1.748;DP=1011;FS=4.194;HRun=0;HaplotypeScore=238.4938;InbreedingCoeff=0.5531;MQ=51.52;MQ0=20;MQRankSum=1.212;QD=14.88;ReadPosRankSum=-0.583;VQSLOD=3.3731;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,25:40:33.05:488,33,0	0/0:13,0:13:29.83:0,30,356	0/0:47,0:13:10.24:0,10,100	0/0:54,0:15:16.41:0,16,231	0/0:30,0:30:75.20:0,75,922	0/0:35,0:35:75.35:0,75,989	0/0:45,0:45:96.21:0,96,1178	0/0:34,0:27:57.16:0,57,706	0/0:61,0:61:99:0,145,1841	0/0:44,0:44:99:0,114,1424	0/0:22,0:22:57.16:0,57,697	0/0:57,0:57:99:0,150,1879	0/0:55,0:54:99:0,135,1714	0/0:39,0:39:99:0,102,1266	0/0:39,0:39:33.73:0,34,420	0/1:16,29:44:10.31:883,0,10	0/0:43,0:43:98.78:0,99,1214	0/0:9,0:9:24.06:0,24,291	0/0:32,0:25:48.06:0,48,555	0/0:27,0:26:34.52:0,35,422	0/0:75,0:73:44.62:0,45,367	0/0:16,0:16:12.51:0,13,154	0/0:18,0:18:8.56:0,9,115	0/0:47,0:46:15.69:0,16,260	0/0:26,0:26:60.06:0,60,735	0/0:36,0:36:90.22:0,90,1095	0/0:19,0:18:42.09:0,42,513	0/0:1,0:1:2.94:0,3,18
chr10	101250314	.	T	TAC	6900.46	PASS	AB=0.619;AC=24;AF=0.429;AN=56;BaseQRankSum=11.801;DP=972;FS=38.159;HRun=0;HaplotypeScore=235.5020;InbreedingCoeff=0.7759;MQ=54.30;MQ0=10;MQRankSum=-5.878;QD=21.10;ReadPosRankSum=-2.346;VQSLOD=2.8689;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:69.02:0,69,887	1/1:3,8:11:22.32:359,22,0	0/0:54,0:22:60.15:0,60,746	0/0:62,0:26:55.38:0,55,652	0/0:21,0:21:51.17:0,51,675	0/0:38,0:38:63.70:0,64,1089	0/0:40,0:40:90.25:0,90,1164	1/1:12,14:21:7.88:652,8,0	0/0:56,0:56:99:0,149,1943	0/0:43,0:43:99:0,108,1418	0/0:14,0:14:33.08:0,33,408	0/0:69,0:69:99:0,181,2360	0/0:56,0:55:99:0,153,1984	0/0:43,0:43:99:0,123,1586	1/1:8,30:38:67.39:1133,67,0	0/0:49,0:48:89.19:0,89,1188	0/0:42,0:42:99:0,102,1321	1/1:2,6:8:18.04:310,18,0	0/1:13,10:18:34.90:480,0,35	1/1:2,17:19:35.64:620,36,0	1/1:22,56:76:2.16:490,2,0	1/1:4,11:15:2.56:244,3,0	0/1:2,11:13:10.63:191,0,11	1/1:9,34:42:27.49:468,27,0	0/0:17,0:17:45.13:0,45,582	1/1:6,21:26:26.27:1038,26,0	1/1:9,14:23:51.05:813,51,0	1/1:0,2:3:5.64:103,6,0
chr10	101250342	.	TCA	T	2950.77	PASS	AB=0.799;AC=23;AF=0.411;AN=56;BaseQRankSum=13.210;DP=829;FS=17.368;HRun=0;HaplotypeScore=204.8617;InbreedingCoeff=0.7958;MQ=55.99;MQ0=11;MQRankSum=-11.274;QD=12.24;ReadPosRankSum=-4.328;VQSLOD=1.1600;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:73.98:0,74,1145	1/1:1,4:5:8.34:110,8,0	0/0:33,0:17:25.57:0,26,525	0/0:49,0:22:19.58:0,20,515	0/0:16,0:16:39.13:0,39,667	0/0:34,0:34:96.27:0,96,1646	0/0:50,0:50:99:0,135,2288	1/1:4,23:22:51.16:680,51,0	0/0:46,0:46:99:0,126,2051	0/0:40,0:40:99:0,105,1660	0/0:13,0:12:33.10:0,33,542	0/0:61,0:60:99:0,169,2874	0/0:46,0:46:99:0,126,2151	0/0:50,0:50:99:0,144,2496	1/1:6,21:27:34.72:420,35,0	0/0:40,0:39:81.16:0,81,1236	0/0:49,0:49:99:0,135,2254	1/1:1,4:5:9.03:117,9,0	1/1:13,5:14:18.18:262,18,0	1/1:2,13:15:25.18:210,25,0	0/1:37,18:54:35.65:89,0,36	0/1:12,2:14:0.77:69,0,1	0/1:7,3:10:6.59:73,0,7	1/1:26,4:29:15.25:174,15,0	0/0:17,0:17:39.12:0,39,659	1/1:4,13:16:33.10:419,33,0	1/1:2,13:15:33.23:435,33,0	1/1:0,3:3:9.03:106,9,0
chr10	101250346	.	A	ACT	1114.50	PASS	AB=0.708;AC=23;AF=0.411;AN=56;BaseQRankSum=12.952;DP=796;FS=4.003;HRun=0;HaplotypeScore=210.2558;InbreedingCoeff=0.7166;MQ=54.76;MQ0=10;MQRankSum=-10.910;QD=4.74;ReadPosRankSum=-5.036;VQSLOD=1.5380;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:74.98:0,75,1040	1/1:5,0:5:7.10:60,7,0	0/0:31,0:13:35.15:0,35,506	0/0:44,0:20:37.21:0,37,513	0/0:14,0:14:39.13:0,39,595	0/0:33,0:33:96.27:0,96,1438	0/0:48,0:48:99:0,135,2017	1/1:28,0:22:39.05:216,39,0	0/0:45,0:45:99:0,113,1789	0/0:37,0:37:99:0,105,1468	0/0:14,0:13:36.10:0,36,508	0/0:60,0:59:99:0,169,2514	0/0:43,0:43:99:0,126,1909	0/0:49,0:49:99:0,144,2173	1/1:24,0:24:26.52:199,27,0	0/0:36,0:35:79.88:0,80,1234	0/0:49,0:49:99:0,135,2022	1/1:6,0:6:5.42:23,5,0	1/1:14,0:11:14.40:165,14,0	1/1:16,0:16:1.51:73,2,0	0/1:48,5:51:0.07:68,0,0	0/1:5,10:15:7.17:48,0,7	0/1:4,7:11:16.66:65,0,17	1/1:19,10:28:13.79:121,14,0	0/0:16,0:16:42.12:0,42,601	1/1:16,0:15:21.48:128,21,0	1/1:15,0:15:4.81:141,5,0	1/1:3,0:3:2.01:5,2,0
chr10	101250356	.	TCA	T	1865.56	PASS	AB=0.913;AC=15;AF=0.268;AN=56;BaseQRankSum=8.580;DP=794;FS=12.947;HRun=0;HaplotypeScore=206.4829;InbreedingCoeff=0.3853;MQ=53.14;MQ0=11;MQRankSum=-4.623;QD=7.40;ReadPosRankSum=-4.588;VQSLOD=1.5391;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,29:34:57.10:696,57,0	0/1:4,0:4:8.37:8,0,13	0/0:42,1:16:19.56:0,20,228	0/0:43,0:16:15.37:0,15,145	0/0:11,0:11:27.07:0,27,411	0/0:34,0:34:93.32:0,93,1519	0/0:47,0:47:99:0,123,2001	0/1:33,0:27:37.26:37,0,86	0/0:44,0:44:99:0,117,1838	0/0:38,0:38:99:0,99,1585	0/0:14,0:13:33.10:0,33,519	0/0:63,0:62:99:0,149,2370	0/0:40,0:40:93.32:0,93,1529	0/0:51,1:52:94.86:0,95,1973	0/0:23,0:23:22.54:0,23,122	0/1:6,31:36:20.96:817,0,21	0/0:48,1:49:70.85:0,71,1677	0/0:6,0:6:5.62:0,6,55	0/1:10,0:8:5.46:5,0,6	0/1:16,0:17:18.06:25,0,18	0/1:47,0:47:9.04:11,0,9	1/1:6,9:15:14.86:134,15,0	1/1:3,7:10:20.81:168,21,0	1/1:19,8:26:11.55:131,12,0	0/0:17,0:17:7.58:0,8,610	0/1:15,0:15:7.71:8,0,88	0/0:13,0:14:18.84:0,19,174	0/0:3,0:4:6.47:0,6,44
chr10	101250360	.	A	ACT	4006.81	PASS	AB=0.993;AC=23;AF=0.411;AN=56;BaseQRankSum=12.520;DP=809;FS=2.926;HRun=0;HaplotypeScore=202.6517;InbreedingCoeff=0.7759;MQ=53.86;MQ0=13;MQRankSum=-11.670;QD=15.24;ReadPosRankSum=-6.098;VQSLOD=1.8609;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:59.03:0,59,384	1/1:3,2:5:9.03:150,9,0	0/0:47,0:16:27.03:0,27,326	0/1:45,0:18:5.38:5,0,273	0/0:11,0:11:33.05:0,33,412	0/0:35,0:35:99:0,99,1459	0/0:48,0:48:99:0,135,1955	1/1:10,20:25:50.92:890,51,0	0/0:40,0:41:91.01:0,91,1712	0/0:45,0:44:99:0,120,1652	0/0:13,0:12:33.10:0,33,483	0/0:61,0:60:99:0,171,2348	0/0:38,0:38:99:0,111,1550	0/0:53,0:53:99:0,150,2037	1/1:6,14:20:30.09:449,30,0	0/0:38,0:37:81.98:0,82,602	0/0:48,0:48:99:0,135,1773	1/1:2,4:6:12.04:211,12,0	1/1:7,1:5:6.01:82,6,0	1/1:6,10:16:30.44:369,30,0	1/1:42,15:55:44.26:542,44,0	0/0:13,0:14:4.62:0,5,47	0/1:10,0:10:7.78:8,0,62	0/1:32,0:31:2.32:2,0,71	0/0:18,0:18:49.22:0,49,627	1/1:3,11:13:13.54:478,14,0	1/1:4,11:15:41.64:625,42,0	1/1:1,3:4:12.04:196,12,0
chr10	101250419	.	GCA	G	4489.28	PASS	AB=0.789;AC=20;AF=0.357;AN=56;BaseQRankSum=9.429;DP=831;FS=44.881;HRun=0;HaplotypeScore=185.4812;InbreedingCoeff=0.8341;MQ=54.50;MQ0=11;MQRankSum=-5.131;QD=15.81;ReadPosRankSum=0.636;VQSLOD=3.1580;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:50.92:0,51,858	1/1:1,2:3:9.03:117,9,0	0/0:40,0:19:34.51:0,35,547	0/1:45,0:19:14.77:15,0,367	0/0:16,0:16:42.13:0,42,678	0/0:27,0:27:57.19:0,57,957	0/0:29,0:29:63.19:0,63,1058	1/1:11,11:19:48.14:606,48,0	0/0:39,0:39:90.29:0,90,1486	0/0:32,0:32:72.11:0,72,1159	0/0:19,0:19:48.16:0,48,785	0/0:48,0:48:99:0,135,2179	0/0:38,0:38:96.30:0,96,1534	0/0:32,0:32:84.29:0,84,1410	1/1:1,16:17:21.07:271,21,0	0/0:26,0:26:39.60:0,40,660	0/0:41,0:40:80.86:0,81,1299	1/1:3,17:19:50.07:574,50,0	1/1:2,10:11:27.09:348,27,0	1/1:2,9:11:14.97:195,15,0	1/1:18,90:108:78.63:980,79,0	0/0:17,0:17:51.17:0,51,857	0/0:14,0:14:33.11:0,33,557	0/0:61,0:60:48.97:0,49,955	0/0:26,0:26:66.23:0,66,1118	0/1:6,16:21:47.07:566,0,47	1/1:2,14:16:39.13:506,39,0	1/1:0,8:8:24.08:312,24,0
chr10	101250516	.	ACTCACACACAC	A	3233.06	PASS	AB=0.911;AC=23;AF=0.411;AN=56;BaseQRankSum=9.879;DP=633;FS=67.077;HRun=0;HaplotypeScore=208.2983;InbreedingCoeff=0.4579;MQ=47.55;MQ0=28;MQRankSum=-8.541;QD=15.40;ReadPosRankSum=-1.227;VQSLOD=0.3983;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:12.10:38,0,12	1/1:1,3:4:5.98:211,6,0	0/0:43,0:5:14.75:0,15,223	0/0:56,0:7:15.05:0,15,328	0/0:30,0:29:87.30:0,87,3785	0/0:22,0:22:64.10:0,64,2388	0/0:27,0:27:78.20:0,78,3018	1/1:21,0:18:27.06:346,27,0	0/0:31,0:31:90.76:0,91,4216	0/0:30,0:30:87.30:0,87,3211	0/0:19,0:19:57.20:0,57,2079	0/0:29,0:29:84.29:0,84,4293	0/0:35,0:34:96.33:0,96,4435	0/0:33,0:32:92.03:0,92,4246	0/1:6,2:8:0:0,0,1	0/1:23,0:22:99:397,0,203	0/0:34,0:34:57.49:0,57,3862	0/1:13,1:13:99:250,0,402	0/1:11,2:10:27.92:442,0,28	1/1:6,8:14:1.36:3,1,0	0/1:26,0:25:40.45:40,0,60	1/1:9,5:14:2.94:103,3,0	0/1:5,2:7:0.21:0,0,0	1/1:18,1:19:5.25:170,5,0	0/0:33,0:33:96.19:0,96,4194	1/1:11,6:17:42.10:863,42,0	1/1:3,5:8:18.06:445,18,0	1/1:0,1:1:3.01:107,3,0
chr10	101250518	.	T	TG	74.52	PASS	AB=0.969;AC=6;AF=0.111;AN=54;BaseQRankSum=5.574;DP=598;FS=74.715;HRun=0;HaplotypeScore=132.4067;InbreedingCoeff=0.2316;MQ=47.95;MQ0=28;MQRankSum=-4.767;QD=1.33;ReadPosRankSum=-2.192;VQSLOD=-0.6065;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:4.27:0,4,51	0/0:4,0:4:5.48:0,5,17	0/0:44,0:6:15.01:0,15,155	0/0:55,0:8:12.04:0,12,158	0/0:30,0:29:87.29:0,87,1216	0/0:22,0:22:64.10:0,64,882	0/0:27,0:27:78.25:0,78,1075	1/1:12,0:9:7.74:70,8,0	0/0:30,0:30:87.29:0,87,1216	0/0:31,0:31:87.29:0,87,1211	0/0:19,0:19:57.19:0,57,797	0/0:29,0:29:84.28:0,84,1172	0/0:34,0:33:96.32:0,96,1340	0/0:33,0:32:90.30:0,90,1258	./.	0/0:22,0:21:19.97:0,20,136	0/0:34,0:36:99:0,99,1300	0/0:12,0:12:2.87:0,3,235	0/1:11,0:8:13.94:14,0,103	0/1:11,0:11:0.25:0,0,0	0/0:20,0:20:3.66:0,4,44	0/0:7,3:10:2.60:0,3,10	0/0:6,1:7:0:0,0,0	0/0:13,3:17:5.17:0,5,46	0/0:32,0:32:93.31:0,93,1301	0/1:12,2:14:62.99:83,0,63	0/1:8,0:8:18.11:18,0,57	0/0:1,0:1:2.22:0,2,7
chr10	101250525	.	CACCAT	C	1440.57	PASS	AB=0.912;AC=22;AF=0.393;AN=56;BaseQRankSum=11.224;DP=595;FS=36.737;HRun=0;HaplotypeScore=155.1555;InbreedingCoeff=0.4209;MQ=48.05;MQ0=30;MQRankSum=-10.281;QD=8.47;ReadPosRankSum=0.301;VQSLOD=1.5501;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:2.30:31,2,0	1/1:4,0:4:6.02:73,6,0	0/0:50,0:8:23.67:0,24,452	0/0:51,0:8:18.06:0,18,466	0/0:31,0:30:87.30:0,87,2709	0/0:22,0:22:60.20:0,60,1686	0/0:23,0:23:69.24:0,69,1996	0/1:6,1:6:18.55:120,0,19	0/0:28,0:28:78.27:0,78,2323	0/0:35,0:35:99:0,102,2922	0/0:19,0:19:54.19:0,54,1599	0/0:31,0:31:90.31:0,90,2696	0/0:33,0:32:90.31:0,90,2693	0/0:34,0:33:91.55:0,92,2719	0/1:5,0:5:0.11:0,0,0	0/1:17,0:17:76.18:288,0,76	0/0:35,0:35:27.46:0,27,2714	0/1:12,0:12:99:169,0,578	0/1:9,2:8:53.69:204,0,54	0/1:11,1:11:0.23:1,0,0	0/1:21,1:22:24.05:24,0,82	1/1:8,2:10:3.01:44,3,0	0/1:6,3:8:0:1,0,0	1/1:17,1:18:4.99:72,5,0	0/0:33,0:32:96.28:0,96,2932	1/1:13,1:14:34.57:335,35,0	1/1:7,1:8:18.05:215,18,0	1/1:1,0:1:3.01:35,3,0
chr10	101250527	.	CCAT	C	1430.73	PASS	AB=0.918;AC=22;AF=0.393;AN=56;BaseQRankSum=11.230;DP=591;FS=29.867;HRun=0;HaplotypeScore=138.1942;InbreedingCoeff=0.4264;MQ=49.30;MQ0=28;MQRankSum=-10.736;QD=8.62;ReadPosRankSum=0.454;VQSLOD=1.6711;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,7:19:3.23:30,3,0	1/1:3,0:4:6.01:63,6,0	0/0:51,0:10:29.90:0,30,462	0/0:49,0:9:18.06:0,18,389	0/0:30,0:29:87.30:0,87,2129	0/0:23,0:23:63.20:0,63,1442	0/0:23,0:23:69.24:0,69,1611	0/1:6,0:6:19.45:129,0,19	0/0:28,0:28:78.27:0,78,1879	0/0:36,0:36:99:0,105,2435	0/0:19,0:19:57.18:0,57,1317	0/0:31,0:31:90.31:0,90,2175	0/0:31,0:30:90.31:0,90,2175	0/0:33,0:32:91.55:0,92,2159	0/1:3,0:5:0.09:0,0,0	0/1:5,11:17:54.79:227,0,55	0/0:36,1:36:32.87:0,33,2212	0/1:9,1:12:99:172,0,469	0/1:8,0:8:49.06:239,0,49	0/1:11,0:11:0.13:0,0,0	0/1:16,0:22:24.35:24,0,68	1/1:8,0:9:2.89:52,3,0	0/1:5,2:7:0.11:0,0,0	1/1:9,4:17:5.20:59,5,0	0/0:34,0:33:99:0,99,2329	1/1:9,0:13:35.90:375,36,0	1/1:6,0:8:18.05:201,18,0	1/1:1,0:1:3.01:31,3,0
chr10	101250530	.	T	TGC	88.96	PASS	AB=0.985;AC=13;AF=0.232;AN=56;BaseQRankSum=7.722;DP=589;FS=6.207;HRun=0;HaplotypeScore=139.1682;InbreedingCoeff=0.3238;MQ=49.49;MQ0=26;MQRankSum=-7.272;QD=0.95;ReadPosRankSum=2.036;VQSLOD=2.1790;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,5:19:1.06:49,1,0	1/1:4,0:4:3.06:8,3,0	0/0:51,0:11:29.89:0,30,363	0/0:48,0:9:18.06:0,18,288	0/0:30,0:30:90.28:0,90,1416	0/0:22,0:22:60.16:0,60,905	0/0:22,0:22:66.18:0,66,1000	0/1:7,0:6:1.30:1,0,19	0/0:27,0:27:74.98:0,75,1119	0/0:35,0:35:99:0,102,1617	0/0:19,0:19:57.17:0,57,902	0/0:31,0:31:90.25:0,90,1369	0/0:31,0:30:90.25:0,90,1366	0/0:31,0:30:88.45:0,88,1361	0/1:5,0:5:0:0,0,0	0/1:15,2:17:31.68:121,0,32	0/0:37,0:36:99:0,102,1508	0/0:13,0:13:22.88:0,23,357	0/1:10,0:8:6.33:6,0,54	0/0:12,0:11:0:0,0,1	0/0:22,0:22:4.41:0,4,56	0/0:9,0:9:0.47:0,0,1	0/1:8,0:7:0.01:0,0,0	0/0:17,0:17:0.85:0,1,3	0/0:37,0:36:99:0,108,1709	0/1:14,0:14:4.64:5,0,71	0/1:9,0:9:4.14:4,0,8	1/1:1,0:1:1.55:4,2,0
chr10	101250533	.	ACACATACT	A	1257.61	PASS	AB=0.964;AC=22;AF=0.393;AN=56;BaseQRankSum=10.791;DP=577;FS=24.833;HRun=0;HaplotypeScore=179.7501;InbreedingCoeff=0.3894;MQ=49.56;MQ0=25;MQRankSum=-9.578;QD=7.44;ReadPosRankSum=-0.516;VQSLOD=1.2360;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,3:20:1.89:42,2,0	1/1:4,0:4:6.02:110,6,0	0/0:48,0:11:26.12:0,26,687	0/0:46,0:9:21.06:0,21,650	0/0:30,0:30:90.31:0,90,3586	0/0:20,0:20:51.17:0,51,2127	0/0:22,0:22:60.21:0,60,2281	1/1:7,0:6:9.01:92,9,0	0/0:26,0:26:63.20:0,63,2490	0/0:34,0:34:99:0,99,3732	0/0:19,0:19:54.19:0,54,2191	0/0:30,0:30:84.29:0,84,3328	0/0:27,0:27:78.25:0,78,3048	0/0:31,0:30:81.24:0,81,3160	0/1:5,0:5:0.11:0,0,0	0/1:10,7:17:99:370,0,111	0/0:37,0:36:87.76:0,88,3181	0/1:13,0:13:99:106,0,864	0/1:10,0:8:99:116,0,116	1/1:12,0:11:0.47:2,0,0	0/1:22,0:22:12.88:13,0,13	1/1:9,0:9:3.01:49,3,0	0/1:9,0:8:0.11:1,0,0	0/1:17,0:17:0.77:47,0,1	0/0:37,0:36:99:0,105,4336	0/1:14,0:14:44.78:236,0,45	1/1:9,0:9:17.40:187,17,0	1/1:1,0:1:3.01:54,3,0
chr10	101250536	.	CAT	C	623.66	PASS	AB=0.817;AC=20;AF=0.357;AN=56;BaseQRankSum=10.817;DP=562;FS=15.301;HRun=0;HaplotypeScore=130.1314;InbreedingCoeff=0.3131;MQ=49.75;MQ0=25;MQRankSum=-9.526;QD=3.80;ReadPosRankSum=-0.123;VQSLOD=1.8876;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:7.80:38,8,0	1/1:1,3:4:6.01:60,6,0	0/0:46,0:11:28.80:0,29,458	0/0:44,0:10:20.99:0,21,357	0/0:30,0:30:90.29:0,90,1702	0/0:20,0:20:51.17:0,51,983	0/0:21,0:21:63.19:0,63,1149	0/1:4,3:6:13.99:93,0,14	0/0:24,0:24:66.21:0,66,1228	0/0:35,0:35:99:0,105,1900	0/0:19,0:19:54.19:0,54,1041	0/0:28,0:28:84.27:0,84,1577	0/0:27,0:27:78.25:0,78,1470	0/0:29,0:28:81.28:0,81,1549	0/1:0,3:3:0:0,0,0	0/1:17,0:17:37.67:95,0,38	0/0:36,0:35:78.46:0,78,1634	0/1:12,1:13:54.15:54,0,374	0/1:6,2:6:42.76:87,0,43	0/1:5,8:12:0.01:0,0,0	0/1:20,1:21:21.75:22,0,31	1/1:9,0:9:2.98:21,3,0	0/1:10,0:9:0:0,0,0	0/1:17,0:17:3.32:18,0,3	0/0:37,0:36:90.62:0,91,1953	0/1:7,7:14:33.73:145,0,34	1/1:3,5:8:15.70:121,16,0	1/1:0,1:1:3.01:33,3,0
chr10	101250537	.	ATACT	A	1588.76	PASS	AB=0.964;AC=20;AF=0.357;AN=56;BaseQRankSum=10.640;DP=546;FS=19.372;HRun=0;HaplotypeScore=135.0107;InbreedingCoeff=0.3030;MQ=50.23;MQ0=24;MQRankSum=-8.837;QD=10.32;ReadPosRankSum=-0.106;VQSLOD=2.0031;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:6.26:49,6,0	1/1:3,0:3:6.02:115,6,0	0/0:43,0:11:27.50:0,28,624	0/0:46,0:10:21.06:0,21,492	0/0:30,0:30:90.31:0,90,2549	0/0:19,0:19:51.17:0,51,1476	0/0:21,0:21:63.22:0,63,1663	0/1:6,0:5:34.55:188,0,35	0/0:23,0:23:66.21:0,66,1734	0/0:36,0:36:99:0,108,2748	0/0:18,0:18:54.19:0,54,1548	0/0:28,0:28:84.29:0,84,2361	0/0:26,0:26:78.25:0,78,2140	0/0:29,0:28:81.24:0,81,2248	0/1:3,0:3:0:0,0,0	0/1:15,0:15:66.05:259,0,66	0/0:35,0:34:88.78:0,89,2297	0/1:12,1:13:99:168,0,564	0/1:6,0:5:71.60:186,0,72	0/1:13,0:12:0.10:0,0,0	0/1:21,0:21:12.32:33,0,12	1/1:2,5:7:3.01:36,3,0	0/1:8,2:9:0:0,0,0	0/1:13,2:15:5.14:33,0,5	0/0:38,0:37:99:0,111,3062	0/1:14,0:14:57.69:370,0,58	1/1:8,0:8:18.02:255,18,0	1/1:1,0:1:3.01:60,3,0
chr10	101250538	.	T	TGC	796.28	PASS	AB=0.851;AC=18;AF=0.333;AN=54;BaseQRankSum=9.497;DP=550;FS=9.665;HRun=0;HaplotypeScore=130.7251;InbreedingCoeff=0.3079;MQ=50.23;MQ0=24;MQRankSum=-8.405;QD=5.04;ReadPosRankSum=0.565;VQSLOD=2.4813;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:8.76:103,9,0	1/1:3,0:3:2.22:13,2,0	0/0:42,0:11:27.06:0,27,409	0/0:43,0:10:21.06:0,21,318	0/0:30,0:30:90.31:0,90,1468	0/0:19,0:19:51.17:0,51,832	0/0:22,0:22:63.22:0,63,1027	0/1:5,1:5:38.16:117,0,38	0/0:23,0:23:66.21:0,66,1046	0/0:37,0:37:99:0,102,1593	0/0:18,0:18:54.18:0,54,880	0/0:28,0:28:84.29:0,84,1368	0/0:25,0:25:75.26:0,75,1219	0/0:29,0:28:81.26:0,81,1297	./.	0/1:15,0:15:28.98:151,0,29	0/0:34,0:33:88.16:0,88,1377	0/1:12,2:14:51.79:52,0,328	0/1:4,2:5:34.10:82,0,34	0/1:13,1:13:0:0,0,1	0/1:19,2:21:13.49:15,0,13	1/1:7,1:8:3:40,3,0	0/1:4,7:11:0.01:0,0,0	1/1:11,5:16:6.01:93,6,0	0/0:38,0:37:76.78:0,77,1676	0/1:13,2:15:31.89:211,0,32	1/1:6,2:8:5.53:76,6,0	0/0:1,0:1:1.25:0,1,3
chr10	101250543	.	A	ACG	1050.13	PASS	AB=0.952;AC=16;AF=0.296;AN=54;BaseQRankSum=10.223;DP=546;FS=30.472;HRun=0;HaplotypeScore=132.4563;InbreedingCoeff=0.3002;MQ=49.38;MQ0=19;MQRankSum=-9.434;QD=7.10;ReadPosRankSum=-1.035;VQSLOD=1.5797;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:13.45:13,0,16	1/1:4,0:4:5.59:35,6,0	0/0:37,0:11:27.50:0,27,362	0/0:35,0:9:18.06:0,18,276	0/0:30,0:30:90.26:0,90,1314	0/0:19,0:19:51.17:0,51,778	0/0:21,0:21:60.19:0,60,895	0/1:16,0:15:0.92:445,0,1	0/0:20,0:20:57.19:0,57,872	0/0:36,0:36:99:0,102,1536	0/0:19,0:19:57.17:0,57,831	0/0:29,0:29:84.26:0,84,1241	0/0:24,0:24:72.23:0,72,1079	0/0:28,0:28:81.24:0,81,1187	./.	0/1:15,0:15:13.35:13,0,90	0/0:32,0:31:78.26:0,78,1179	0/1:11,2:13:46.22:46,0,302	0/1:7,2:9:21.79:178,0,22	0/0:13,1:13:0.47:0,0,1	1/1:16,2:18:2.23:23,2,0	0/0:8,0:8:2.68:0,3,11	0/1:12,0:11:0.01:0,0,0	0/1:16,0:16:2.06:2,0,18	0/0:41,0:40:99:0,118,1768	0/1:13,1:14:20.04:229,0,20	1/1:7,2:9:20.69:206,21,0	1/1:1,0:1:2.60:10,3,0
chr10	101250547	.	ACG	A	1176.28	PASS	AB=0.805;AC=18;AF=0.333;AN=54;BaseQRankSum=6.359;DP=540;FS=31.700;HRun=0;HaplotypeScore=124.8350;InbreedingCoeff=0.4881;MQ=50.06;MQ0=13;MQRankSum=-7.944;QD=8.17;ReadPosRankSum=-3.481;VQSLOD=0.7323;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:6.23:0,6,71	1/1:1,3:4:6.02:66,6,0	0/0:31,0:10:27.46:0,27,412	0/0:30,0:9:20.62:0,21,337	0/0:29,0:29:84.27:0,84,1575	0/0:18,0:18:51.15:0,51,909	0/0:22,0:22:21.32:0,21,1013	1/1:17,4:20:36.77:453,37,0	0/0:19,0:19:57.20:0,57,1086	0/0:39,0:39:99:0,114,2009	0/0:18,0:18:54.17:0,54,994	0/0:30,0:30:87.22:0,87,1467	0/0:24,0:24:69.16:0,69,1163	0/0:27,0:27:75.20:0,75,1326	./.	0/0:14,0:14:19.59:0,20,108	0/0:31,0:30:66.16:0,66,1307	0/1:13,1:14:82.24:82,0,278	0/1:8,2:10:26.47:200,0,26	0/1:5,8:12:0.01:0,0,0	1/1:16,2:18:2.13:45,2,0	1/1:3,5:8:2.98:21,3,0	0/1:10,2:11:0:0,0,0	0/1:14,2:16:14.85:15,0,21	0/0:41,0:40:99:0,106,2163	0/1:9,7:15:39.15:213,0,39	1/1:5,5:10:20.96:189,21,0	1/1:1,1:2:6:59,6,0
chr10	101250919	.	AT	A	5279.44	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=10.170;DP=548;FS=1.919;HRun=9;HaplotypeScore=79.4938;InbreedingCoeff=0.9649;MQ=76.41;MQ0=0;MQRankSum=-7.400;QD=22.56;ReadPosRankSum=-0.751;VQSLOD=5.2617;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:30:71.02:657,71,0	1/1:0,7:7:21.01:192,21,0	0/0:18,1:20:10.82:0,11,399	0/0:9,0:9:14.23:0,14,165	0/0:35,1:38:83.64:0,84,1174	0/0:15,0:15:45.09:0,45,505	0/0:17,0:17:42.12:0,42,485	1/1:2,30:32:87.02:789,87,0	0/0:13,0:13:33.10:0,33,381	0/0:28,0:28:72.21:0,72,824	0/0:31,0:31:87.26:0,87,1004	0/0:18,0:19:41.96:0,42,464	0/0:19,0:19:57.16:0,57,649	0/0:22,0:22:63.17:0,63,717	1/1:4,20:24:60.02:549,60,0	1/1:4,23:27:59.99:549,60,0	0/0:14,0:14:36.11:0,36,415	1/1:0,9:9:27.01:247,27,0	1/1:4,16:20:51.03:467,51,0	1/1:2,19:21:57.03:520,57,0	1/1:4,14:18:36.01:329,36,0	0/0:23,0:23:69.17:0,69,768	0/0:18,0:18:48.14:0,48,547	0/0:13,1:14:36.11:0,36,415	0/0:14,0:14:39.12:0,39,450	1/1:7,16:23:16.39:405,16,0	1/1:2,20:22:60.03:549,60,0	1/1:0,1:1:3:27,3,0
chr10	101250947	.	G	GA	8403.01	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=11.370;DP=639;FS=3.108;HRun=6;HaplotypeScore=95.6626;InbreedingCoeff=0.9950;MQ=75.95;MQ0=0;MQRankSum=-8.607;QD=31.24;ReadPosRankSum=-1.880;VQSLOD=4.0720;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,995	1/1:0,10:10:30.10:377,30,0	0/0:30,0:27:41.12:0,41,428	0/0:22,0:19:23.46:0,23,337	0/0:43,0:43:99:0,123,1225	0/0:17,0:17:45.09:0,45,452	0/0:21,0:21:60.12:0,60,604	1/1:13,18:31:78.23:957,78,0	0/0:11,0:11:24.05:0,24,245	0/0:28,0:28:78.18:0,78,796	0/0:39,0:39:99:0,114,1161	0/0:19,0:19:54.07:0,54,533	0/0:24,0:24:66.13:0,66,666	0/0:27,0:27:63.13:0,63,642	1/1:3,21:24:60.19:754,60,0	0/0:25,0:25:63.04:0,63,642	0/0:11,0:11:30.07:0,30,306	1/1:0,18:18:48.09:566,48,0	1/1:5,13:18:39.12:491,39,0	1/1:3,23:26:60.15:737,60,0	1/1:2,16:18:39.12:490,39,0	1/1:4,22:27:69.22:854,69,0	1/1:0,23:23:61.44:757,61,0	1/1:0,16:16:48.15:602,48,0	0/0:17,0:17:45.10:0,45,459	1/1:4,21:25:38.61:799,39,0	1/1:3,24:27:69.22:868,69,0	1/1:0,6:6:12.04:151,12,0
chr10	101251673	.	G	GTTT	5555.98	PASS	AB=0.516;AC=25;AF=0.446;AN=56;BaseQRankSum=1.141;DP=578;FS=0.390;HRun=10;HaplotypeScore=91.9838;InbreedingCoeff=0.9172;MQ=67.46;MQ0=1;MQRankSum=-0.927;QD=22.14;ReadPosRankSum=-2.303;VQSLOD=2.9639;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:51.06:0,51,620	1/1:3,8:11:20.92:288,21,0	0/0:29,0:23:26.94:0,27,457	0/0:19,0:17:21.48:0,21,269	0/0:28,0:28:54.04:0,54,656	0/0:16,0:16:39.05:0,39,449	0/0:12,0:13:36.01:0,36,405	1/1:12,11:28:55.32:760,55,0	0/0:10,0:10:20.98:0,21,237	0/0:39,0:40:66.86:0,67,1101	0/0:19,0:19:51.13:0,51,607	0/0:13,0:15:28.31:0,28,343	0/0:18,0:18:48.13:0,48,581	0/0:16,0:16:33.32:0,33,407	1/1:3,0:23:52.05:392,52,0	0/0:20,0:20:54.12:0,54,645	0/0:34,0:35:78.01:0,78,930	1/1:2,9:12:24.08:447,24,0	1/1:13,12:28:57.11:852,57,0	1/1:8,8:17:30.03:422,30,0	1/1:6,1:10:9.01:124,9,0	1/1:3,0:20:25.97:92,26,0	1/1:3,0:20:18.08:43,18,0	0/1:1,0:16:16.95:17,0,19	0/0:21,0:23:52.63:0,53,594	1/1:7,16:27:60.10:936,60,0	1/1:8,16:27:48.14:851,48,0	1/1:2,9:12:18.06:332,18,0
chr10	101253231	.	C	CA	6265.09	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=13.656;DP=499;FS=0.354;HRun=9;HaplotypeScore=71.7629;InbreedingCoeff=0.9572;MQ=69.98;MQ0=0;MQRankSum=-1.442;QD=26.77;ReadPosRankSum=-1.151;VQSLOD=4.7339;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:26.99:0,27,233	1/1:0,8:8:21.06:232,21,0	0/0:5,0:5:11.99:0,12,102	0/0:10,0:10:18.97:0,19,126	0/0:33,0:33:56.51:0,57,653	0/0:28,0:28:74.96:0,75,648	0/0:14,0:14:29.97:0,30,260	1/1:4,24:28:72.15:769,72,0	0/0:11,0:11:26.99:0,27,234	0/0:20,0:19:47.98:0,48,415	0/0:23,0:23:59.98:0,60,521	0/0:24,0:24:56.98:0,57,495	0/0:17,0:17:41.93:0,42,356	0/0:14,0:14:41.99:0,42,365	1/1:1,18:19:48.13:531,48,0	0/0:18,0:18:53.99:0,54,469	0/0:16,0:16:44.99:0,45,390	1/1:0,13:13:36.10:398,36,0	1/1:1,13:14:41.90:444,42,0	1/1:3,29:32:61.15:891,61,0	1/1:0,9:10:29.91:313,30,0	1/1:5,7:12:1.02:238,1,0	1/1:4,21:25:11.67:549,12,0	1/1:3,15:18:36.10:398,36,0	0/0:21,0:21:56.96:0,57,490	1/1:3,16:19:51.07:540,51,0	1/1:3,21:24:60.16:664,60,0	1/1:2,10:12:27.07:299,27,0
chr10	101253706	.	AT	A	5714.45	PASS	AB=0.759;AC=31;AF=0.554;AN=56;BaseQRankSum=12.808;DP=582;FS=8.894;HRun=10;HaplotypeScore=69.1042;InbreedingCoeff=0.8179;MQ=69.59;MQ0=0;MQRankSum=-0.311;QD=17.11;ReadPosRankSum=2.663;VQSLOD=5.3113;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:23:32.52:98,33,0	1/1:1,8:9:14.99:130,15,0	0/1:5,1:6:8.25:8,0,126	0/1:14,2:16:12.25:12,0,233	0/0:38,1:40:82.07:0,82,1116	0/0:21,0:21:54.13:0,54,588	0/0:22,1:24:36.93:0,37,610	1/1:3,28:31:80.96:699,81,0	0/0:22,0:22:37.13:0,37,620	0/0:18,0:19:48.13:0,48,531	0/0:18,1:19:28.09:0,28,538	0/0:17,0:17:45.06:0,45,482	0/0:26,1:28:49.05:0,49,742	0/0:16,0:16:42.11:0,42,465	1/1:0,17:17:44.99:391,45,0	1/1:4,0:31:42.77:126,43,0	0/0:14,0:14:36.09:0,36,390	1/1:0,16:16:47.99:417,48,0	1/1:3,18:21:23.78:424,24,0	1/1:4,22:26:59.97:520,60,0	1/1:2,13:15:8.81:305,9,0	1/1:1,11:12:26.99:234,27,0	1/1:3,20:23:50.98:443,51,0	1/1:1,23:24:65.99:573,66,0	0/0:28,0:27:75.19:0,75,823	0/1:4,30:34:0.57:682,0,1	1/1:0,22:22:56.91:495,57,0	1/1:2,6:8:17.99:156,18,0
chr10	101254037	.	TC	T	7506.16	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=18.775;DP=558;FS=3.701;HRun=2;HaplotypeScore=120.2243;InbreedingCoeff=0.9759;MQ=86.09;MQ0=0;MQRankSum=-12.193;QD=33.51;ReadPosRankSum=-2.369;VQSLOD=3.8023;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,1788	1/1:0,11:11:33.10:395,33,0	0/0:28,0:28:78.62:0,79,1073	0/0:14,0:14:35.39:0,35,504	0/0:25,0:25:75.25:0,75,1122	0/0:25,0:25:69.22:0,69,1015	0/0:24,0:24:72.24:0,72,1079	1/1:4,20:24:60.18:719,60,0	0/0:16,0:16:48.16:0,48,718	0/0:20,0:20:60.20:0,60,898	0/0:16,0:16:48.16:0,48,718	0/0:21,0:21:63.21:0,63,944	0/0:12,0:12:36.12:0,36,539	0/0:15,0:15:45.15:0,45,672	1/1:3,21:24:66.20:789,66,0	0/0:24,0:24:72.23:0,72,1059	0/0:31,0:31:90.28:0,90,1310	1/1:2,12:14:42.13:500,42,0	1/1:2,13:15:39.12:468,39,0	1/1:2,25:27:81.08:907,81,0	1/1:0,13:13:33.10:391,33,0	1/1:0,15:15:45.14:538,45,0	1/1:0,16:16:48.15:574,48,0	1/1:1,12:13:33.10:395,33,0	0/0:19,0:19:57.19:0,57,853	1/1:2,22:24:69.21:826,69,0	1/1:0,27:27:81.25:966,81,0	1/1:0,1:1:3.01:36,3,0
chr10	101254068	.	GACTTGC	G	14276.58	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=18.018;DP=546;FS=5.031;HRun=0;HaplotypeScore=161.6981;InbreedingCoeff=0.9748;MQ=77.74;MQ0=0;MQRankSum=-18.066;QD=59.99;ReadPosRankSum=0.887;VQSLOD=5.0207;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,4253	1/1:3,8:11:21.07:516,21,0	0/0:19,0:19:50.74:0,51,1547	0/0:13,0:13:35.71:0,36,1030	0/0:25,0:25:75.26:0,75,2590	0/0:22,0:22:66.23:0,66,2412	0/0:21,0:21:63.22:0,63,2250	1/1:5,24:29:72.21:1602,72,0	0/0:15,0:15:45.15:0,45,1580	0/0:20,0:20:57.20:0,57,2026	0/0:17,0:17:51.15:0,51,1732	0/0:19,0:19:57.20:0,57,2086	0/0:17,0:17:51.18:0,51,1811	0/0:13,0:13:39.13:0,39,1287	1/1:3,22:25:60.21:1474,60,0	0/0:22,0:22:66.23:0,66,2276	0/0:29,0:29:84.27:0,84,2990	1/1:1,14:15:42.14:1034,42,0	1/1:5,9:14:24.08:591,24,0	1/1:2,22:24:66.23:1620,66,0	1/1:1,10:11:24.08:554,24,0	1/1:3,18:21:54.16:1230,54,0	1/1:0,12:12:36.12:885,36,0	1/1:1,14:15:30.10:733,30,0	0/0:16,0:16:45.15:0,45,1649	1/1:1,28:29:84.29:2065,84,0	1/1:5,26:31:78.27:1899,78,0	1/1:0,1:1:3.01:74,3,0
chr10	101254705	.	GTTTA	G	4430.63	PASS	AB=1.000;AC=25;AF=0.463;AN=54;BaseQRankSum=12.702;DP=423;FS=118.465;HRun=0;HaplotypeScore=97.5544;InbreedingCoeff=0.8876;MQ=69.92;MQ0=2;MQRankSum=-12.214;QD=29.15;ReadPosRankSum=-0.501;VQSLOD=1.6801;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:43.49:0,43,1458	1/1:1,2:3:6.02:111,6,0	0/0:25,0:18:12.15:0,12,762	0/1:29,0:19:25.02:25,0,546	0/0:18,0:18:54.17:0,54,1345	0/0:24,0:24:66.14:0,66,1480	0/0:16,0:16:45.12:0,45,1017	1/1:6,9:14:30.05:480,30,0	0/0:15,0:15:42.14:0,42,1123	0/0:29,0:29:84.29:0,84,2120	0/0:24,0:24:69.22:0,69,1625	0/0:12,0:12:36.12:0,36,869	0/0:27,0:27:78.27:0,78,1892	0/0:16,0:16:45.10:0,45,1025	1/1:2,8:11:20.96:316,21,0	0/0:8,0:8:24.08:0,24,642	0/0:24,0:24:66.21:0,66,1663	1/1:4,7:11:9.03:170,9,0	1/1:1,10:11:30.08:515,30,0	1/1:4,7:11:29.95:441,30,0	./.	1/1:2,3:5:11.91:182,12,0	1/1:3,7:11:32.95:511,33,0	1/1:1,9:10:15.05:277,15,0	0/0:9,0:9:27.09:0,27,722	1/1:4,13:17:42.14:779,42,0	1/1:2,9:11:18.03:287,18,0	1/1:0,7:7:18.06:338,18,0
chr10	101254717	.	T	TG	1763.34	PASS	AB=0.714;AC=23;AF=0.411;AN=56;BaseQRankSum=13.165;DP=409;FS=167.441;HRun=1;HaplotypeScore=89.0095;InbreedingCoeff=0.8842;MQ=72.99;MQ0=1;MQRankSum=-12.647;QD=17.63;ReadPosRankSum=0.695;VQSLOD=-0.6283;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:57.66:0,58,741	1/1:0,3:3:9:80,9,0	0/0:28,0:21:42.71:0,43,452	0/0:29,0:22:33.74:0,34,412	0/0:17,0:17:51.17:0,51,661	0/0:23,0:23:69.22:0,69,894	0/0:14,0:14:42.14:0,42,544	1/1:6,6:12:18.67:209,19,0	0/0:18,0:18:54.18:0,54,701	0/0:30,0:30:87.28:0,87,1126	0/0:22,0:22:66.21:0,66,856	0/0:13,0:13:36.12:0,36,467	0/0:23,0:23:64.09:0,64,853	0/0:16,0:16:45.15:0,45,584	1/1:3,8:11:20.91:170,21,0	0/0:13,0:13:36.11:0,36,454	0/0:24,0:24:69.20:0,69,874	0/1:3,2:5:15.81:48,0,16	1/1:3,5:8:23.90:192,24,0	1/1:1,7:8:23.18:194,23,0	0/0:1,0:1:1.25:0,1,3	1/1:1,3:4:11.96:97,12,0	1/1:0,9:9:26.95:224,27,0	1/1:4,3:7:17.87:133,18,0	0/0:12,0:12:36.10:0,36,453	1/1:3,13:16:41.84:354,42,0	1/1:0,10:10:14.92:119,15,0	1/1:0,7:7:18.01:162,18,0
chr10	101254726	.	T	TC	1810.40	PASS	AB=0.600;AC=25;AF=0.446;AN=56;BaseQRankSum=13.207;DP=425;FS=166.620;HRun=0;HaplotypeScore=95.7808;InbreedingCoeff=0.8829;MQ=70.53;MQ0=1;MQRankSum=-12.222;QD=16.46;ReadPosRankSum=-0.164;VQSLOD=-0.4671;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:63.64:0,64,841	1/1:0,3:3:9:79,9,0	0/0:26,0:18:36.97:0,37,454	0/0:31,0:23:28.05:0,28,475	0/0:16,0:16:45.14:0,45,608	0/0:21,0:21:60.20:0,60,836	0/0:12,0:12:36.10:0,36,484	1/1:5,6:11:26.70:227,27,0	0/0:17,0:17:51.17:0,51,711	0/0:33,0:33:96.26:0,96,1262	0/0:23,0:23:66.21:0,66,903	0/0:16,0:16:45.13:0,45,594	0/0:25,0:25:75.21:0,75,990	0/0:19,0:19:54.17:0,54,737	1/1:3,8:11:15.01:135,15,0	0/0:13,0:13:39.12:0,39,529	0/0:25,0:25:72.21:0,72,967	0/1:1,2:3:32.84:49,0,33	1/1:4,6:10:29.80:251,30,0	1/1:2,7:9:26.46:196,26,0	1/1:3,0:3:4.71:17,5,0	1/1:0,3:3:9:78,9,0	1/1:3,9:12:14.20:215,14,0	1/1:1,3:4:11.86:89,12,0	0/0:15,0:15:45.12:0,45,579	1/1:3,13:16:38.72:316,39,0	1/1:4,9:14:25.42:159,25,0	1/1:4,7:11:29.41:221,29,0
chr10	101254767	.	TGA	T	38.32	PASS	AB=0.897;AC=8;AF=0.143;AN=56;BaseQRankSum=6.094;DP=440;FS=15.541;HRun=0;HaplotypeScore=121.7106;InbreedingCoeff=-0.1569;MQ=67.48;MQ0=1;MQRankSum=-4.930;QD=0.63;ReadPosRankSum=-2.381;VQSLOD=0.8914;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.25:0,72,1401	0/1:3,1:4:4.27:4,0,60	0/0:29,0:20:47.77:0,48,766	0/0:31,0:20:34.84:0,35,650	0/0:16,0:16:48.16:0,48,932	0/0:23,0:23:69.24:0,69,1345	0/0:19,0:19:57.20:0,57,1108	0/1:15,4:19:37.30:37,0,369	0/0:17,0:17:51.18:0,51,1002	0/0:31,0:31:93.32:0,93,1820	0/0:21,0:21:63.22:0,63,1213	0/0:14,0:14:42.13:0,42,789	0/0:26,0:26:78.27:0,78,1478	0/0:21,0:21:63.20:0,63,1170	0/0:12,0:12:17.69:0,18,135	0/0:17,0:17:51.17:0,51,994	0/0:24,0:24:66.70:0,67,1265	0/1:4,0:4:18.13:18,0,86	0/1:3,0:2:8.28:8,0,31	0/1:9,1:10:8.45:8,0,190	0/1:4,0:4:26.64:47,0,27	0/1:3,2:5:30.49:31,0,30	0/1:11,1:12:11.28:11,0,185	0/0:2,0:2:5.84:0,6,34	0/0:14,0:14:42.14:0,42,816	0/0:16,0:16:37.71:0,38,331	0/0:15,0:15:34.68:0,35,260	0/0:5,0:5:14.98:0,15,169
chr10	101254768	.	G	GGTTTT	4091.50	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=13.857;DP=434;FS=105.585;HRun=0;HaplotypeScore=132.6384;InbreedingCoeff=0.8771;MQ=67.70;MQ0=1;MQRankSum=-13.258;QD=37.88;ReadPosRankSum=-0.369;VQSLOD=0.2165;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.23:0,72,1545	1/1:2,2:4:11.82:187,12,0	0/0:29,0:20:45.20:0,45,829	0/0:31,0:19:32.92:0,33,626	0/0:16,0:16:48.15:0,48,983	0/0:23,0:23:69.22:0,69,1557	0/0:19,0:19:57.18:0,57,1230	1/1:19,0:19:47.59:568,48,0	0/0:17,0:17:51.17:0,51,1136	0/0:31,0:31:93.31:0,93,2066	0/0:21,0:21:63.20:0,63,1346	0/0:13,0:13:39.13:0,39,895	0/0:26,0:26:78.22:0,78,1606	0/0:20,0:20:60.17:0,60,1273	1/1:5,5:10:15.05:346,15,0	0/0:17,0:17:51.16:0,51,1136	0/0:24,0:24:66.68:0,67,1482	0/1:4,0:4:17.60:18,0,62	1/1:3,0:2:5.98:67,6,0	1/1:5,5:10:29.91:530,30,0	1/1:2,0:4:12.01:129,12,0	1/1:4,0:4:8.61:91,9,0	1/1:8,4:12:32.67:486,33,0	1/1:1,1:2:6.02:115,6,0	0/0:14,0:14:42.13:0,42,912	1/1:9,7:16:38.93:654,39,0	1/1:8,6:15:35.93:701,36,0	1/1:5,0:5:15.01:201,15,0
chr10	101254780	.	C	CGTTTG	3126.87	PASS	AB=0.776;AC=18;AF=0.321;AN=56;BaseQRankSum=10.345;DP=465;FS=21.782;HRun=0;HaplotypeScore=143.0612;InbreedingCoeff=0.5635;MQ=69.73;MQ0=2;MQRankSum=-10.716;QD=27.43;ReadPosRankSum=0.752;VQSLOD=1.8644;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:54.09:0,54,1071	1/1:2,3:5:11.97:243,12,0	0/0:42,0:33:64.20:0,64,1071	0/0:31,0:22:46.94:0,47,691	0/0:15,0:15:42.11:0,42,840	0/0:27,0:27:81.18:0,81,1570	0/0:17,0:17:51.15:0,51,1050	0/1:18,4:22:50.42:398,0,50	0/0:15,0:15:45.10:0,45,892	0/0:34,0:34:99:0,99,1998	0/0:21,0:21:63.15:0,63,1223	0/0:16,0:16:48.16:0,48,1037	0/0:26,0:26:78.26:0,78,1668	0/0:21,0:21:63.17:0,63,1311	1/1:5,5:10:9.41:244,9,0	0/0:16,0:16:48.15:0,48,1014	0/0:24,0:24:54.23:0,54,1316	0/1:3,1:4:63.79:78,0,64	1/1:6,0:5:2.81:36,3,0	0/1:10,5:15:17.53:533,0,18	0/0:5,0:5:8.74:0,9,30	1/1:6,1:7:11.04:156,11,0	0/1:7,5:12:9.81:437,0,10	1/1:1,1:2:5.97:99,6,0	0/0:14,0:14:42.11:0,42,845	1/1:12,7:19:5.19:498,5,0	1/1:5,7:12:17.99:588,18,0	0/0:3,0:3:5.78:0,6,17
chr10	101254784	.	T	TC	1131.89	PASS	AB=0.833;AC=15;AF=0.268;AN=56;BaseQRankSum=10.202;DP=459;FS=57.312;HRun=0;HaplotypeScore=115.2960;InbreedingCoeff=0.1416;MQ=69.99;MQ0=1;MQRankSum=-8.955;QD=10.29;ReadPosRankSum=0.892;VQSLOD=1.7622;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.10:0,60,772	0/1:5,0:5:15.59:16,0,81	0/0:41,0:34:79.30:0,79,872	0/0:35,0:22:39.87:0,40,499	0/0:15,0:15:45.14:0,45,611	0/0:25,0:25:72.24:0,72,1006	0/0:17,0:17:48.15:0,48,654	0/1:11,8:19:99:274,0,299	0/0:14,0:14:42.14:0,42,585	0/0:33,0:33:99:0,99,1354	0/0:20,0:20:57.17:0,57,764	0/0:19,0:19:54.15:0,54,719	0/0:30,0:30:90.25:0,90,1187	0/0:20,0:20:60.20:0,60,837	1/1:5,5:10:14.65:139,15,0	0/0:15,0:15:45.15:0,45,628	0/0:24,0:24:66.64:0,67,892	0/0:4,0:4:6.02:0,6,76	0/1:2,3:5:32.76:82,0,33	0/1:14,2:16:99:105,0,223	1/1:4,1:5:7.43:64,7,0	0/1:5,2:7:28.80:29,0,151	0/1:10,1:11:85.03:85,0,179	0/1:2,0:2:14.80:15,0,32	0/0:14,0:14:39.06:0,39,521	0/1:12,3:15:99:187,0,127	0/1:8,4:12:12.68:164,0,13	1/1:0,3:3:9.03:141,9,0
chr10	101254811	.	G	GTTGT	4535.43	PASS	AB=1.000;AC=19;AF=0.396;AN=48;BaseQRankSum=12.198;DP=485;FS=0.501;HRun=0;HaplotypeScore=128.0912;InbreedingCoeff=0.8569;MQ=69.05;MQ0=1;MQRankSum=-11.668;QD=36.58;ReadPosRankSum=-1.693;VQSLOD=4.7410;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.23:0,72,1177	1/1:1,4:5:12.04:300,12,0	0/0:38,0:33:44.28:0,44,649	0/0:35,0:25:16.52:0,17,477	0/0:26,0:26:75.24:0,75,1202	0/0:25,0:25:63.21:0,63,1067	0/0:16,0:16:33.10:0,33,529	1/1:8,4:11:15.05:375,15,0	0/0:18,0:18:54.18:0,54,921	0/0:37,0:37:87.30:0,87,1470	0/0:20,0:20:51.17:0,51,870	0/0:18,0:18:45.14:0,45,742	0/0:29,0:29:69.22:0,69,1135	0/0:19,0:19:48.13:0,48,766	./.	0/0:18,0:18:42.14:0,42,708	0/1:25,0:25:4.78:5,0,653	1/1:4,1:5:6.02:150,6,0	./.	1/1:8,20:30:78.22:1811,78,0	./.	1/1:5,7:12:33.09:661,33,0	1/1:4,8:12:24.07:537,24,0	1/1:2,0:2:3.01:75,3,0	0/0:21,0:21:48.16:0,48,819	1/1:5,7:13:21.04:471,21,0	1/1:4,2:8:6.02:150,6,0	./.
chr10	101254947	.	GCTTGA	G	2799.14	PASS	AC=16;AF=0.348;AN=46;BaseQRankSum=11.112;DP=451;FS=1.905;HRun=0;HaplotypeScore=103.1896;InbreedingCoeff=0.9375;MQ=98.70;MQ0=0;MQRankSum=-11.214;QD=45.89;ReadPosRankSum=3.992;VQSLOD=4.0553;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:84.29:0,84,2543	1/1:0,8:8:21.07:435,21,0	0/0:26,0:27:74.10:0,74,2068	0/0:22,0:22:63.07:0,63,1637	0/0:24,0:24:60.21:0,60,1767	0/0:24,0:24:69.24:0,69,2026	0/0:20,0:20:51.18:0,51,1552	./.	0/0:25,0:25:75.26:0,75,2287	0/0:29,0:29:84.29:0,84,2543	0/0:22,0:22:63.22:0,63,1915	0/0:17,0:17:51.18:0,51,1556	0/0:26,0:26:75.26:0,75,2305	0/0:29,0:29:87.28:0,87,2470	1/1:0,2:2:6.02:124,6,0	0/0:26,0:26:72.25:0,72,2167	0/0:34,0:34:99:0,99,2958	1/1:1,1:2:3.01:62,3,0	./.	1/1:1,12:13:33.11:682,33,0	./.	1/1:2,5:7:15.05:311,15,0	1/1:4,12:16:33.11:683,33,0	./.	0/0:20,0:20:57.20:0,57,1721	1/1:2,4:6:12.04:248,12,0	1/1:0,7:7:21.07:435,21,0	./.
chr10	101255050	.	T	TGG	4966.48	PASS	AC=24;AF=0.444;AN=54;BaseQRankSum=12.228;DP=490;FS=121.243;HRun=3;HaplotypeScore=96.8697;InbreedingCoeff=0.9738;MQ=86.94;MQ0=0;MQRankSum=-12.776;QD=41.74;ReadPosRankSum=-2.983;VQSLOD=0.2075;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.19:0,57,796	1/1:0,6:6:18.06:329,18,0	0/0:16,0:17:21.51:0,22,641	0/0:20,0:20:53.81:0,54,694	0/0:32,0:32:93.30:0,93,1284	0/0:25,0:25:69.22:0,69,949	0/0:24,0:24:63.19:0,63,863	1/1:6,11:18:39.08:648,39,0	0/0:22,0:22:63.17:0,63,829	0/0:46,0:46:99:0,132,1832	0/0:29,0:29:84.27:0,84,1159	0/0:18,0:18:51.17:0,51,714	0/0:21,0:21:57.18:0,57,779	0/0:25,0:25:75.25:0,75,1049	1/1:4,8:12:30.06:514,30,0	0/0:20,0:20:57.19:0,57,798	0/0:36,0:36:99:0,108,1512	1/1:0,5:5:9.03:165,9,0	1/1:5,10:15:32.86:583,33,0	1/1:5,7:12:24.08:428,24,0	1/1:0,3:3:9.03:165,9,0	1/1:0,7:7:21.07:384,21,0	1/1:1,3:4:12.03:189,12,0	1/1:1,6:7:15.05:274,15,0	0/0:16,0:16:48.16:0,48,672	1/1:3,14:16:36.11:631,36,0	1/1:1,12:13:36.12:657,36,0	./.
chr10	101255068	.	GT	G	1404.68	PASS	AB=0.538;AC=23;AF=0.426;AN=54;BaseQRankSum=13.776;DP=460;FS=151.137;HRun=1;HaplotypeScore=87.9144;InbreedingCoeff=0.8917;MQ=86.26;MQ0=0;MQRankSum=-13.756;QD=15.27;ReadPosRankSum=0.467;VQSLOD=-0.3425;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.22:0,72,1119	1/1:0,5:5:14.86:103,15,0	0/0:17,0:17:51.17:0,51,800	0/0:17,0:17:45.03:0,45,665	0/0:29,0:29:87.30:0,87,1388	0/0:25,0:25:75.21:0,75,1169	0/0:24,0:24:72.25:0,72,1146	1/1:2,7:9:23.70:171,24,0	0/0:20,0:20:60.20:0,60,959	0/0:45,0:45:99:0,135,2118	0/0:29,0:29:87.28:0,87,1367	0/0:21,0:21:63.20:0,63,981	0/0:26,0:26:75.24:0,75,1169	0/0:23,0:23:69.24:0,69,1102	1/1:0,10:10:29.72:209,30,0	0/0:20,0:20:60.20:0,60,959	0/0:32,0:32:96.33:0,96,1532	1/1:1,4:5:14.93:113,15,0	1/1:4,3:7:14.38:104,14,0	1/1:3,6:9:19.69:133,20,0	1/1:1,4:5:8.91:64,9,0	1/1:0,7:7:20.85:152,21,0	1/1:0,3:3:5.98:46,6,0	1/1:4,4:8:13.64:89,14,0	0/0:16,0:16:48.16:0,48,765	0/1:2,12:13:12.15:214,0,12	1/1:3,7:10:29.77:221,30,0	./.
chr10	101255071	.	CT	C	1397.03	PASS	AB=0.538;AC=23;AF=0.426;AN=54;BaseQRankSum=13.810;DP=469;FS=145.011;HRun=1;HaplotypeScore=89.3245;InbreedingCoeff=0.8889;MQ=88.93;MQ0=0;MQRankSum=-13.466;QD=15.52;ReadPosRankSum=0.947;VQSLOD=-0.3185;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.22:0,72,1099	1/1:0,5:5:14.90:107,15,0	0/0:17,0:17:51.14:0,51,730	0/0:21,0:22:58.88:0,59,854	0/0:32,0:32:96.24:0,96,1369	0/0:25,0:25:75.26:0,75,1171	0/0:25,0:25:75.20:0,75,1083	1/1:1,7:8:23.78:175,24,0	0/0:20,0:20:60.20:0,60,938	0/0:44,0:44:99:0,132,1989	0/0:29,0:29:87.30:0,87,1361	0/0:20,0:20:60.19:0,60,918	0/0:26,0:26:75.24:0,75,1143	0/0:23,0:23:69.18:0,69,989	1/1:0,10:10:29.84:220,30,0	0/0:21,0:21:63.20:0,63,965	0/0:33,0:33:99:0,99,1406	1/1:1,4:5:14.94:113,15,0	1/1:3,3:6:14.81:100,15,0	1/1:3,6:9:19.43:134,19,0	1/1:1,4:5:8.93:63,9,0	1/1:0,7:7:20.90:159,21,0	1/1:0,3:3:5.97:44,6,0	1/1:4,4:8:11.87:81,12,0	0/0:17,0:17:51.16:0,51,775	0/1:2,12:13:14.10:193,0,14	1/1:3,7:10:29.84:222,30,0	./.
chr10	101255275	.	T	TA	6514.64	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-6.380;DP=511;FS=3.584;HRun=6;HaplotypeScore=59.0109;InbreedingCoeff=0.9854;MQ=67.84;MQ0=0;MQRankSum=-5.038;QD=30.59;ReadPosRankSum=-0.221;VQSLOD=5.3518;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.10:0,48,490	1/1:0,4:4:9.03:113,9,0	0/0:15,0:11:26.96:0,27,245	0/0:16,0:16:19.28:0,19,337	0/0:36,0:36:93.18:0,93,941	0/0:22,0:22:60.12:0,60,606	0/0:20,0:20:57.05:0,57,567	1/1:2,31:33:90.26:1105,90,0	0/0:11,0:11:33.07:0,33,337	0/0:33,0:33:84.17:0,84,851	0/0:29,0:29:84.19:0,84,857	0/0:17,0:17:44.97:0,45,437	0/0:24,0:24:57.10:0,57,573	0/0:14,0:14:42.07:0,42,415	1/1:7,14:21:48.13:588,48,0	0/0:11,0:11:30.06:0,30,301	0/0:17,0:17:45.06:0,45,449	1/1:2,15:17:45.14:564,45,0	1/1:2,21:23:60.17:723,60,0	1/1:3,13:16:39.12:490,39,0	1/1:2,5:6:15.05:189,15,0	1/1:1,8:9:21.03:247,21,0	1/1:5,14:19:47.95:535,48,0	1/1:0,7:7:21.07:263,21,0	0/0:15,0:15:42.09:0,42,428	1/1:2,26:28:72.21:890,72,0	1/1:4,19:23:51.06:620,51,0	1/1:0,6:6:15.05:188,15,0
chr10	101255626	.	CG	C	8097.89	PASS	AB=0.545;AC=25;AF=0.446;AN=56;BaseQRankSum=15.399;DP=677;FS=33.319;HRun=3;HaplotypeScore=77.4761;InbreedingCoeff=0.9262;MQ=84.79;MQ0=0;MQRankSum=-4.687;QD=32.92;ReadPosRankSum=1.083;VQSLOD=2.5944;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.30:0,90,1291	1/1:2,8:10:24.08:297,24,0	0/0:26,0:26:62.02:0,62,893	0/0:21,0:20:44.30:0,44,563	0/0:48,0:48:99:0,138,1862	0/0:18,0:18:51.15:0,51,713	0/0:27,0:27:81.22:0,81,1121	1/1:1,23:24:66.20:806,66,0	0/0:24,0:24:72.17:0,72,945	0/0:30,0:30:90.26:0,90,1195	0/0:38,0:38:99:0,111,1559	0/0:29,0:29:87.28:0,87,1222	0/0:33,0:33:99:0,99,1367	0/0:33,0:33:96.24:0,96,1270	1/1:3,22:25:75.21:905,75,0	0/0:22,0:22:66.18:0,66,896	0/0:32,0:32:96.32:0,96,1381	1/1:2,11:13:36.09:430,36,0	1/1:2,16:18:51.16:631,51,0	1/1:2,22:24:69.20:841,69,0	1/1:2,15:17:27.08:334,27,0	1/1:0,13:13:39.12:482,39,0	1/1:1,21:22:60.19:733,60,0	1/1:2,22:24:63.19:768,63,0	0/0:18,0:18:54.18:0,54,777	0/1:3,15:18:32.14:540,0,32	1/1:4,28:32:90.28:1112,90,0	1/1:0,6:6:18.06:219,18,0
chr10	101255677	.	T	TGGGG	13543.53	PASS	AB=0.649;AC=25;AF=0.446;AN=56;BaseQRankSum=12.444;DP=663;FS=5.907;HRun=5;HaplotypeScore=140.4006;InbreedingCoeff=0.9285;MQ=81.67;MQ0=0;MQRankSum=-13.385;QD=49.43;ReadPosRankSum=-2.940;VQSLOD=2.2481;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,1620	1/1:7,4:11:27.01:528,27,0	0/0:26,0:26:69.17:0,69,1008	0/0:20,0:20:44.69:0,45,553	0/0:33,0:33:90.28:0,90,1481	0/0:21,0:21:57.17:0,57,925	0/0:17,0:17:48.07:0,48,696	1/1:25,7:32:68.95:1052,69,0	0/0:24,0:24:69.23:0,69,1155	0/0:31,0:31:87.29:0,87,1452	0/0:27,0:27:75.22:0,75,1211	0/0:28,0:28:84.17:0,84,1292	0/0:28,0:29:78.22:0,78,1253	0/0:28,0:28:81.26:0,81,1330	1/1:3,22:27:72.20:1766,72,0	0/0:15,0:15:39.13:0,39,653	0/0:33,0:33:96.20:0,96,1514	1/1:5,16:22:51.15:1262,51,0	1/1:1,11:14:42.13:1004,42,0	1/1:7,22:30:66.14:1640,66,0	1/1:8,7:15:23.46:567,23,0	1/1:4,2:18:45.07:862,45,0	1/1:9,2:24:54.10:1014,54,0	1/1:12,1:21:32.79:522,33,0	0/0:19,0:19:51.10:0,51,750	0/1:11,12:24:12.98:1157,0,13	1/1:9,19:28:77.90:1835,78,0	1/1:3,4:7:15.04:336,15,0
chr10	101256927	.	ATT	A	3924.49	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=4.694;DP=597;FS=8.801;HRun=13;HaplotypeScore=81.6611;InbreedingCoeff=0.9341;MQ=70.06;MQ0=1;MQRankSum=0.046;QD=19.43;ReadPosRankSum=5.781;VQSLOD=2.5192;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:75.18:0,75,962	1/1:0,6:6:15.01:145,15,0	0/0:15,1:17:2.94:0,3,255	0/0:11,0:11:11.60:0,12,104	0/0:32,0:32:73.94:0,74,886	0/0:17,0:17:45.12:0,45,599	0/0:16,0:21:55.77:0,56,621	1/1:3,14:19:13.44:355,13,0	0/0:11,0:17:38.60:0,39,483	0/0:26,0:29:71.09:0,71,802	0/0:16,1:19:25:0,25,632	0/0:23,0:24:59.65:0,60,763	0/0:24,0:24:54.06:0,54,668	0/0:16,0:16:42.11:0,42,566	1/1:4,18:23:44.77:419,45,0	0/0:21,0:23:65.68:0,66,867	0/0:23,0:23:54.18:0,54,782	1/1:5,21:27:48.36:524,48,0	1/1:6,8:13:20.99:204,21,0	1/1:7,26:35:68.58:689,69,0	1/1:2,15:17:33.04:320,33,0	0/0:8,1:22:12.60:0,13,162	0/0:5,1:27:22.55:0,23,185	0/0:3,0:19:32.93:0,33,126	0/0:17,0:19:35.57:0,36,407	1/1:4,15:19:3.63:391,4,0	1/1:5,16:22:44.73:419,45,0	1/1:3,16:20:41.96:457,42,0
chr10	101258722	.	ACACCCCAGGAGTGAGGCACTCCGGGTGTGAGG	A	4385.73	PASS	AB=0.739;AC=25;AF=0.446;AN=56;BaseQRankSum=6.788;DP=588;FS=7.012;HRun=0;HaplotypeScore=442.9339;InbreedingCoeff=0.7300;MQ=73.59;MQ0=2;MQRankSum=-1.710;QD=17.20;ReadPosRankSum=2.462;VQSLOD=1.4883;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:48.08:1179,48,0	1/1:6,0:6:6.02:123,6,0	0/0:17,0:12:0.62:0,1,2	0/0:18,0:14:1.25:0,1,3	0/0:19,0:19:24.07:0,24,496	0/0:23,0:23:36.12:0,36,869	0/0:46,0:46:66.21:0,66,1736	0/0:23,0:23:1.25:0,1,3	0/0:21,0:21:42.12:0,42,1107	0/0:20,0:20:27.09:0,27,725	0/0:10,0:10:12.04:0,12,325	0/0:31,0:31:51.17:0,51,1263	0/0:24,0:24:36.12:0,36,937	0/0:31,0:31:54.13:0,54,1200	1/1:14,0:14:12.04:286,12,0	1/1:15,0:15:21.07:445,21,0	0/0:35,0:34:57.16:0,57,1536	1/1:19,0:19:24.08:570,24,0	1/1:18,0:18:6.01:100,6,0	1/1:5,10:15:8.98:114,9,0	1/1:38,0:38:42:612,42,0	0/1:8,13:21:0:1,0,0	0/1:5,10:15:0:0,0,0	1/1:19,0:19:21.05:544,21,0	0/0:15,0:15:30.07:0,30,800	0/1:17,0:17:87.88:207,0,88	1/1:18,0:18:12.03:181,12,0	1/1:3,0:3:2.99:24,3,0
chr10	101258960	.	GCACACA	G	603.57	PASS	AB=0.984;AC=15;AF=0.300;AN=50;BaseQRankSum=3.700;DP=572;FS=11.200;HRun=0;HaplotypeScore=113.1008;InbreedingCoeff=0.4838;MQ=64.21;MQ0=34;MQRankSum=0.280;QD=3.75;ReadPosRankSum=2.307;VQSLOD=1.5532;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:34:3.01:0,3,72	0/0:13,0:13:24.06:0,24,413	./.	0/0:34,0:20:0.47:0,0,1	0/0:20,0:19:18.02:0,18,256	0/0:10,0:10:6.02:0,6,115	0/0:28,0:28:31.63:0,32,574	0/0:16,0:16:6.01:0,6,74	0/0:26,0:26:36.05:0,36,648	0/0:26,0:25:32.12:0,32,678	0/0:15,0:14:5.51:0,6,78	0/0:17,0:17:0.11:0,0,245	0/0:26,0:26:19.95:0,20,478	0/0:11,0:10:9.92:0,10,130	./.	0/0:19,0:16:18.06:0,18,360	0/0:20,0:18:27.07:0,27,590	1/1:17,0:16:6.02:106,6,0	0/1:10,0:10:0.09:34,0,0	0/1:19,0:20:3.55:144,0,4	./.	1/1:21,0:26:3.01:38,3,0	1/1:11,0:13:5.69:69,6,0	1/1:23,0:16:6.02:89,6,0	0/0:17,1:17:18.06:0,18,411	1/1:24,1:23:2.70:164,3,0	0/1:14,0:12:17.95:51,0,18	1/1:6,5:9:3.01:55,3,0
chr10	101258999	.	CACACACAG	C	713.01	PASS	AB=0.959;AC=16;AF=0.308;AN=52;BaseQRankSum=4.228;DP=614;FS=1.703;HRun=0;HaplotypeScore=107.2002;InbreedingCoeff=0.3164;MQ=34.90;MQ0=109;MQRankSum=1.448;QD=2.95;ReadPosRankSum=-0.784;VQSLOD=1.5378;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:22:3.01:0,3,88	0/0:16,0:16:24.06:0,24,414	./.	./.	0/0:28,0:24:26.34:0,26,311	0/0:21,0:14:7.17:0,7,117	0/0:40,0:30:33.46:0,33,578	0/0:26,0:25:17.75:0,18,147	0/0:28,0:23:42.01:0,42,712	0/1:24,0:21:31.68:32,0,656	0/0:11,0:9:8.50:0,9,103	0/0:19,0:17:7.47:0,7,327	0/0:24,0:20:4.94:0,5,478	0/0:20,0:14:10.39:0,10,150	0/1:19,0:19:0:0,0,0	0/0:16,0:11:18.06:0,18,360	0/0:25,0:13:30.03:0,30,622	0/1:21,10:17:1.63:151,0,2	1/1:14,0:10:2.89:57,3,0	0/1:22,0:20:3.55:144,0,4	0/0:36,0:16:0.47:0,0,1	1/1:25,0:21:3.01:38,3,0	1/1:16,0:14:5.69:61,6,0	1/1:38,0:14:5.65:83,6,0	0/0:23,0:19:1.81:0,2,406	0/1:26,0:22:23.63:189,0,24	0/1:13,0:6:18.45:51,0,18	1/1:14,0:8:1.50:53,1,0
chr10	101259001	.	CACACAG	C	796.94	PASS	AB=0.952;AC=23;AF=0.442;AN=52;BaseQRankSum=2.737;DP=607;FS=5.148;HRun=0;HaplotypeScore=96.8777;InbreedingCoeff=0.4088;MQ=34.53;MQ0=107;MQRankSum=-0.333;QD=2.73;ReadPosRankSum=0.081;VQSLOD=1.4834;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:23:2.03:0,2,46	0/0:16,0:16:21:0,21,230	./.	./.	0/0:26,0:23:20.05:0,20,154	0/0:22,0:15:6.77:0,7,69	0/0:41,0:28:26.29:0,26,342	0/0:26,0:25:5.23:0,5,38	0/0:29,0:24:29.61:0,30,393	0/1:23,0:20:38.85:39,0,394	0/1:10,0:8:5.77:6,0,61	0/1:20,0:18:23.36:23,0,161	0/1:24,0:20:13.95:14,0,308	0/0:21,0:15:12.39:0,12,92	0/1:13,6:19:0:0,0,0	0/0:15,0:10:17.95:0,18,232	0/0:25,0:13:26.97:0,27,417	1/1:31,0:17:8.08:114,8,0	1/1:14,0:10:9:114,9,0	1/1:21,1:20:13.84:153,14,0	0/0:35,0:15:0.47:0,0,1	1/1:25,0:21:2.99:23,3,0	1/1:15,0:13:3.01:44,3,0	1/1:37,0:13:2.64:40,3,0	0/0:22,0:18:1.81:0,2,251	1/1:26,0:22:24.82:304,25,0	1/1:12,1:6:5.88:51,6,0	1/1:13,0:7:2.05:35,2,0
chr10	101259005	.	CAGAGAGAGAGAGAGAGAG	C	1002.16	PASS	AB=0.958;AC=12;AF=0.300;AN=40;BaseQRankSum=2.358;DP=596;FS=11.806;HRun=0;HaplotypeScore=136.6993;InbreedingCoeff=0.4202;MQ=32.98;MQ0=113;MQRankSum=-2.760;QD=5.42;ReadPosRankSum=0.664;VQSLOD=1.8892;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:23:5.93:0,6,91	./.	./.	./.	0/0:24,0:21:15.05:0,15,730	0/1:23,0:16:0:0,0,0	0/0:44,0:29:2.19:0,2,92	0/1:25,0:24:22.57:106,0,23	0/0:30,0:24:21.07:0,21,669	0/0:21,0:18:33.11:0,33,988	0/0:10,0:8:6.01:0,6,249	0/0:17,0:15:10.75:0,11,344	0/0:24,0:20:24.55:0,25,900	0/0:20,0:14:6.01:0,6,327	0/1:16,3:19:0:0,0,0	0/0:15,0:10:2.97:0,3,20	0/0:23,0:11:12.04:0,12,461	0/1:30,0:16:7.67:257,0,8	1/1:13,0:9:2.98:90,3,0	./.	./.	./.	./.	1/1:36,0:12:0.89:2,1,0	0/0:23,0:20:6.02:0,6,237	1/1:17,9:22:23.94:557,24,0	1/1:11,0:5:8.99:112,9,0	./.
chr10	101259071	.	CAGACAGAG	C	4635.74	PASS	AB=0.771;AC=28;AF=0.500;AN=56;BaseQRankSum=5.183;DP=630;FS=6.016;HRun=0;HaplotypeScore=161.1084;InbreedingCoeff=0.9032;MQ=46.90;MQ0=51;MQRankSum=-0.093;QD=14.76;ReadPosRankSum=-1.878;VQSLOD=3.5027;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:30:3:26,3,0	1/1:5,0:5:15.05:317,15,0	0/0:10,0:8:20.90:0,21,251	0/0:18,0:8:21.05:0,21,284	0/0:19,0:17:30.09:0,30,680	0/0:26,0:23:29.54:0,30,294	0/0:40,0:30:72.01:0,72,604	1/1:23,0:22:40.95:358,41,0	0/0:24,0:22:48.38:0,48,501	0/0:34,0:33:88.21:0,88,1632	0/0:12,0:12:30.06:0,30,589	0/0:26,0:24:29.91:0,30,529	0/0:36,0:34:64.25:0,64,818	0/0:23,0:20:50.79:0,51,583	1/1:24,0:23:35.90:513,36,0	1/1:14,0:13:5.87:70,6,0	0/0:24,0:20:56.40:0,56,628	1/1:24,0:18:44.86:626,45,0	1/1:22,0:18:32.98:458,33,0	0/1:26,0:25:0:0,0,0	1/1:22,0:16:25.82:199,26,0	0/1:5,27:31:0.27:0,0,0	1/1:9,0:9:14.99:192,15,0	1/1:38,0:23:29.60:601,30,0	0/0:24,0:22:47.53:0,48,450	1/1:22,0:21:23.06:664,23,0	1/1:12,0:9:26.90:362,27,0	1/1:7,0:6:15:250,15,0
chr10	101259075	.	CAGAGAGACAGAG	C	5498.53	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=2.006;DP=651;FS=1.823;HRun=0;HaplotypeScore=205.9045;InbreedingCoeff=0.8261;MQ=51.15;MQ0=44;MQRankSum=-0.524;QD=17.13;ReadPosRankSum=-0.480;VQSLOD=3.5803;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,31:31:3.01:73,3,0	1/1:6,0:6:18.06:347,18,0	0/0:17,0:14:37.10:0,37,722	0/0:21,0:13:19.69:0,20,638	0/0:18,0:17:33.11:0,33,1162	0/0:24,0:22:33.01:0,33,845	0/0:38,0:29:72.57:0,73,1526	1/1:24,0:23:37.19:554,37,0	0/0:25,0:23:65.43:0,65,1418	0/0:36,0:35:96.30:0,96,3094	0/0:13,0:13:33.11:0,33,1080	0/0:29,0:27:62.93:0,63,1377	0/0:36,0:35:93.28:0,93,2083	0/0:24,0:21:54.19:0,54,1399	1/1:24,0:26:45.02:801,45,0	1/1:1,14:14:6.02:121,6,0	0/0:22,0:19:57.18:0,57,1376	1/1:22,0:19:46.18:823,46,0	1/1:22,0:18:37.71:634,38,0	1/1:3,22:24:5.86:35,6,0	1/1:23,0:17:29.05:284,29,0	0/1:31,0:30:0.02:0,0,0	0/1:9,0:9:0.05:19,0,0	1/1:37,0:25:19.95:161,20,0	0/0:25,0:23:54.19:0,54,1271	0/1:24,0:23:5.40:929,0,5	1/1:14,0:11:30.07:471,30,0	1/1:7,0:6:15:244,15,0
chr10	101259083	.	CAGAG	C	3463.68	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=9.890;DP=647;FS=3.453;HRun=0;HaplotypeScore=151.9293;InbreedingCoeff=0.7069;MQ=56.26;MQ0=23;MQRankSum=-0.875;QD=12.73;ReadPosRankSum=1.083;VQSLOD=3.4899;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:31:3:25,3,0	1/1:6,0:6:17.79:219,18,0	0/0:25,0:21:53.55:0,54,1007	0/0:31,0:21:41.16:0,41,814	0/0:18,0:17:30.09:0,30,703	0/0:24,0:23:42.02:0,42,695	0/0:32,0:28:72.24:0,72,1365	1/1:22,0:21:40.11:372,40,0	0/0:25,0:25:68.50:0,68,1196	0/0:36,0:35:92.08:0,92,2118	0/0:14,0:14:36.11:0,36,808	0/0:29,0:28:65.66:0,66,1212	0/0:38,0:37:94.04:0,94,1764	0/0:24,0:21:54.18:0,54,1068	1/1:26,3:29:50.96:515,51,0	1/1:15,0:14:5.78:55,6,0	0/0:22,0:21:60.03:0,60,1101	1/1:23,0:21:49.40:497,49,0	1/1:2,13:14:38.43:373,38,0	1/1:24,0:23:2.98:22,3,0	1/1:19,0:16:31.48:396,31,0	0/0:29,0:28:2.97:0,3,25	0/1:7,0:7:5.12:5,0,97	0/1:35,0:27:38.08:38,0,81	0/0:28,0:26:63.22:0,63,1242	0/1:25,0:24:42.70:531,0,43	1/1:12,0:10:26.68:261,27,0	1/1:6,0:6:14.93:154,15,0
chr10	101259530	.	CATGTATGT	C	9661.52	PASS	AB=0.767;AC=28;AF=0.500;AN=56;BaseQRankSum=15.202;DP=728;FS=5.408;HRun=0;HaplotypeScore=200.0562;InbreedingCoeff=0.7767;MQ=56.69;MQ0=6;MQRankSum=-7.133;QD=25.83;ReadPosRankSum=-0.143;VQSLOD=4.2372;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:1.57:136,2,0	1/1:2,9:11:21.03:461,21,0	0/0:14,0:4:5.75:0,6,82	0/0:13,0:7:14.15:0,14,189	0/0:37,0:37:96.28:0,96,3209	0/0:29,0:29:66.23:0,66,2511	0/0:29,0:29:74.57:0,75,2139	1/1:3,28:31:84.09:1222,84,0	0/0:31,0:31:81.23:0,81,2607	0/0:35,0:35:93.30:0,93,3072	0/0:27,0:27:81.21:0,81,2570	0/0:26,0:26:66.23:0,66,2506	0/0:33,0:33:93.28:0,93,3182	0/0:40,0:40:99:0,114,3941	1/1:5,37:42:54.11:1327,54,0	0/1:30,0:30:99:126,0,155	0/0:18,0:18:45.04:0,45,1500	0/1:2,14:16:12.01:107,0,12	1/1:5,10:13:24.04:328,24,0	1/1:4,26:30:54:1148,54,0	1/1:8,22:30:11.91:140,12,0	1/1:2,14:16:26.92:482,27,0	1/1:5,17:22:20.99:442,21,0	1/1:4,14:18:9.03:241,9,0	0/0:22,0:22:48.12:0,48,1542	1/1:1,31:32:90.24:1959,90,0	1/1:2,38:40:56.89:1463,57,0	1/1:5,5:10:3.01:80,3,0
chr10	101259542	.	TATG	T	1835.01	PASS	AB=0.929;AC=15;AF=0.268;AN=56;BaseQRankSum=15.967;DP=719;FS=3.788;HRun=0;HaplotypeScore=167.7344;InbreedingCoeff=0.0535;MQ=55.38;MQ0=7;MQRankSum=-12.701;QD=5.92;ReadPosRankSum=7.985;VQSLOD=2.1830;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,18:25:5.57:355,0,6	0/1:10,0:10:36.29:62,0,36	0/0:18,0:7:15.05:0,15,213	0/0:15,0:9:25.32:0,25,394	0/0:35,0:35:99:0,105,2391	0/0:25,0:25:75.26:0,75,1702	0/0:28,0:28:84.29:0,84,1930	0/0:36,0:36:33.47:0,33,725	0/0:38,0:38:99:0,114,2426	0/0:35,0:35:99:0,105,2364	0/0:30,0:30:90.31:0,90,2077	0/0:24,0:24:72.25:0,72,1673	0/0:33,0:33:99:0,99,2261	0/0:43,0:43:99:0,129,2922	1/1:38,0:38:46.56:264,47,0	0/1:13,17:30:39.49:518,0,39	0/0:16,0:16:42.09:0,42,987	0/1:17,0:17:1.57:2,0,86	0/0:15,0:13:15.85:0,16,260	0/1:29,0:29:69.90:168,0,70	0/1:28,0:28:7.62:8,0,68	0/1:19,0:19:56.13:56,0,113	0/1:19,0:19:56.88:62,0,57	0/1:15,0:15:27.21:38,0,27	0/0:18,0:18:54.18:0,54,1214	0/1:35,0:35:99:202,0,271	1/1:39,0:38:16.24:254,16,0	0/1:6,0:6:10.58:11,0,33
chr10	101259692	.	A	AG	1647.75	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.079;DP=704;FS=0.561;HRun=4;HaplotypeScore=87.2548;InbreedingCoeff=0.9987;MQ=88.90;MQ0=0;MQRankSum=-3.997;QD=34.33;ReadPosRankSum=2.358;VQSLOD=4.0901;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:66.22:901,66,0	0/0:9,0:9:27.05:0,27,294	0/0:28,0:28:36.42:0,36,701	0/0:28,0:28:65.29:0,65,675	0/0:36,0:36:99:0,102,1143	0/0:25,0:25:66.14:0,66,713	0/0:14,0:14:39.04:0,39,409	0/0:35,0:35:99:0,102,1119	0/0:25,0:25:69.18:0,69,773	0/0:29,0:29:75.18:0,75,831	0/0:24,0:24:60.15:0,60,671	0/0:27,0:27:78.21:0,78,875	0/0:31,0:31:87.21:0,87,965	0/0:33,0:33:99:0,99,1093	0/0:22,0:22:63.12:0,63,690	1/1:1,23:24:35.20:868,35,0	0/0:34,0:34:93.20:0,93,1028	0/0:19,0:19:51.13:0,51,569	0/0:18,0:18:41.98:0,42,457	0/0:35,0:35:96.27:0,96,1089	0/0:28,0:28:69.15:0,69,760	0/0:24,0:24:63.16:0,63,701	0/0:18,0:18:51.14:0,51,578	0/0:23,0:23:63.18:0,63,714	0/0:20,0:20:57.16:0,57,647	0/0:32,0:32:93.26:0,93,1048	0/0:30,0:30:90.20:0,90,1005	0/0:9,0:9:27.08:0,27,306
chr10	101260009	.	G	GA	1316.76	PASS	AB=0.784;AC=17;AF=0.304;AN=56;BaseQRankSum=-4.996;DP=535;FS=2.066;HRun=15;HaplotypeScore=80.2071;InbreedingCoeff=0.1389;MQ=79.97;MQ0=2;MQRankSum=0.943;QD=5.18;ReadPosRankSum=-3.035;VQSLOD=1.7852;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,3:26:22.05:0,22,276	0/1:5,5:10:14.71:51,0,15	0/0:34,0:18:19.45:0,19,102	0/1:20,0:14:18.47:33,0,18	0/0:27,0:27:26.14:0,26,244	0/0:17,0:19:11.20:0,11,156	0/0:17,0:20:44.90:0,45,250	1/1:14,19:37:12.83:314,13,0	0/1:10,2:12:10.80:11,0,54	0/0:14,0:15:24.98:0,25,141	0/0:12,0:15:24.44:0,24,135	0/0:9,1:12:2.35:0,2,107	0/0:19,0:24:23.04:0,23,199	0/0:10,0:12:11.96:0,12,105	0/1:6,12:23:14.85:188,0,15	0/1:14,3:18:30.45:30,0,90	0/1:13,1:19:0.06:0,0,127	0/1:4,3:8:27.87:37,0,28	1/1:10,9:20:8.69:157,9,0	1/1:5,15:22:37.78:309,38,0	0/1:14,1:19:22.15:22,0,50	0/0:3,0:17:9.45:0,9,28	0/0:2,0:19:22.30:0,22,64	0/0:2,0:22:37:0,37,108	0/0:14,4:18:9.90:0,10,165	0/1:10,12:22:4.45:200,0,4	0/1:7,8:16:25.97:129,0,26	0/1:7,0:7:0:0,0,0
chr10	101260611	.	TGTAGCA	T	1442.52	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=18.643;DP=645;FS=0.675;HRun=0;HaplotypeScore=235.0300;InbreedingCoeff=0.8412;MQ=74.24;MQ0=3;MQRankSum=-18.032;QD=4.71;ReadPosRankSum=2.820;VQSLOD=2.5691;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:47.27:223,47,0	1/1:9,0:9:13.78:44,14,0	0/0:14,0:14:39.13:0,39,1324	0/0:22,0:22:66.20:0,66,1915	0/0:23,0:23:69.24:0,69,2463	0/0:11,0:11:30.10:0,30,977	0/0:20,0:20:57.20:0,57,1907	1/1:23,0:23:25.80:126,26,0	0/0:34,0:34:99:0,102,3484	0/0:19,0:19:54.18:0,54,1732	0/0:19,0:19:57.19:0,57,1810	0/0:42,0:42:99:0,117,3970	0/0:40,0:40:99:0,117,3886	0/0:42,0:42:99:0,117,3831	1/1:39,0:39:54.42:167,54,0	0/1:29,0:29:58.67:103,0,59	0/0:28,0:28:78.27:0,78,2680	1/1:6,0:5:7.79:29,8,0	1/1:16,4:20:33.15:178,33,0	1/1:20,2:22:29.92:92,30,0	1/1:18,0:17:8.74:61,9,0	1/1:13,3:16:17.85:106,18,0	1/1:13,0:13:15.82:78,16,0	0/1:18,0:17:2.59:48,0,3	0/0:25,0:25:75.26:0,75,2570	1/1:28,0:28:54.88:216,55,0	1/1:31,0:31:52.08:171,52,0	1/1:4,0:4:5.19:20,5,0
chr10	101260612	.	G	GC	7847.44	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=18.691;DP=568;FS=2.759;HRun=0;HaplotypeScore=144.2849;InbreedingCoeff=0.9740;MQ=77.61;MQ0=3;MQRankSum=-18.232;QD=34.57;ReadPosRankSum=3.315;VQSLOD=4.4705;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:23:56.67:818,57,0	1/1:1,6:7:21.07:291,21,0	0/0:13,0:13:39.11:0,39,527	0/0:22,0:22:66.21:0,66,896	0/0:24,0:24:69.23:0,69,965	0/0:12,0:12:33.08:0,33,427	0/0:21,0:21:60.19:0,60,822	1/1:1,11:13:39.11:508,39,0	0/0:34,0:34:99:0,102,1426	0/0:18,0:18:54.18:0,54,753	0/0:20,0:20:57.16:0,57,762	0/0:43,0:43:99:0,126,1702	0/0:40,0:40:99:0,117,1630	0/0:42,0:42:99:0,120,1638	1/1:2,27:30:83.14:1153,83,0	1/1:1,22:23:27.26:851,27,0	0/0:26,0:26:78.24:0,78,1073	1/1:0,3:3:9.03:119,9,0	1/1:4,9:13:30.09:392,30,0	1/1:2,15:17:45.15:604,45,0	1/1:1,10:11:19.35:266,19,0	1/1:3,8:12:18.27:278,18,0	1/1:2,7:9:18.89:246,19,0	1/1:1,11:13:31.45:358,31,0	0/0:26,0:26:75.25:0,75,1047	1/1:1,21:22:66.21:873,66,0	1/1:0,25:25:75.25:1009,75,0	1/1:0,2:2:6.02:82,6,0
chr10	101260614	.	AGC	A	7091.80	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=19.471;DP=564;FS=6.021;HRun=0;HaplotypeScore=156.1703;InbreedingCoeff=0.9669;MQ=79.65;MQ0=3;MQRankSum=-18.858;QD=31.38;ReadPosRankSum=2.592;VQSLOD=6.8923;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:69.18:800,69,0	1/1:7,0:7:21:229,21,0	0/0:15,0:15:42.14:0,42,844	0/0:22,0:22:66.22:0,66,1244	0/0:25,0:25:75.26:0,75,1523	0/0:11,0:11:33.11:0,33,670	0/0:20,0:20:60.17:0,60,1146	1/1:13,0:13:38.94:444,39,0	0/0:33,0:33:99:0,99,1975	0/0:19,0:19:57.20:0,57,1145	0/0:21,0:21:63.20:0,63,1244	0/0:40,0:40:99:0,120,2389	0/0:39,0:39:99:0,117,2376	0/0:39,0:39:99:0,114,2314	1/1:29,0:29:87.17:990,87,0	1/1:23,0:23:8.24:708,8,0	0/0:26,0:26:78.25:0,78,1549	1/1:3,1:3:9.03:110,9,0	1/1:13,0:13:27.04:334,27,0	1/1:17,0:17:45.13:512,45,0	1/1:11,1:11:23.99:268,24,0	1/1:11,2:12:27.07:305,27,0	1/1:7,2:9:24.04:262,24,0	1/1:13,1:13:36.05:372,36,0	0/0:28,0:28:84.27:0,84,1669	1/1:22,0:22:66.21:810,66,0	1/1:25,0:25:75.22:873,75,0	1/1:2,0:2:6.02:74,6,0
chr10	101260615	.	G	GT	4286.01	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=19.337;DP=563;FS=4.356;HRun=0;HaplotypeScore=157.3587;InbreedingCoeff=0.9744;MQ=80.32;MQ0=3;MQRankSum=-18.926;QD=18.88;ReadPosRankSum=2.459;VQSLOD=6.4542;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:66.58:488,67,0	1/1:1,6:7:17.20:133,17,0	0/0:16,0:16:42.05:0,42,562	0/0:22,0:22:66.09:0,66,838	0/0:26,0:26:75.25:0,75,1048	0/0:11,0:11:33.11:0,33,461	0/0:18,0:18:54.18:0,54,755	1/1:1,11:12:35.85:280,36,0	0/0:33,0:33:96.32:0,96,1343	0/0:19,0:19:57.17:0,57,767	0/0:21,0:21:60.20:0,60,839	0/0:39,0:39:99:0,117,1632	0/0:39,0:39:99:0,117,1636	0/0:39,0:39:99:0,114,1593	1/1:2,27:29:82.58:605,83,0	1/1:1,22:23:26.65:445,27,0	0/0:25,0:25:75.25:0,75,1049	1/1:1,3:3:8.94:65,9,0	1/1:4,9:13:26.89:214,27,0	1/1:2,15:17:44.77:338,45,0	1/1:3,10:12:21.86:146,22,0	1/1:5,8:12:26.59:184,27,0	1/1:2,7:9:22.13:159,22,0	1/1:3,11:13:23.61:128,24,0	0/0:28,0:28:81.27:0,81,1132	1/1:1,21:22:65.75:514,66,0	1/1:1,25:26:74.40:540,74,0	1/1:0,2:2:5.99:48,6,0
chr10	101260617	.	A	AT	7028.10	PASS	AB=0.593;AC=29;AF=0.518;AN=56;BaseQRankSum=19.869;DP=630;FS=6.151;HRun=0;HaplotypeScore=179.6960;InbreedingCoeff=0.9229;MQ=75.38;MQ0=3;MQRankSum=-19.793;QD=23.91;ReadPosRankSum=-0.997;VQSLOD=4.1447;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,22:36:99:970,105,0	1/1:2,6:8:23.94:208,24,0	0/0:15,0:15:45.14:0,45,613	0/0:22,0:22:60.17:0,60,785	0/0:26,0:26:78.25:0,78,1073	0/0:12,0:12:30.10:0,30,419	0/0:20,0:20:57.17:0,57,779	1/1:9,11:20:59.76:523,60,0	0/0:32,0:32:96.31:0,96,1325	0/0:17,0:17:51.17:0,51,713	0/0:21,0:21:63.21:0,63,880	0/0:39,0:39:99:0,117,1619	0/0:39,0:39:99:0,117,1636	0/0:40,0:40:99:0,114,1594	1/1:9,27:36:95.86:915,96,0	1/1:2,22:24:30.07:593,30,0	0/0:26,0:26:75.25:0,75,1049	1/1:2,3:4:12.01:108,12,0	1/1:9,9:18:45.01:409,45,0	1/1:8,15:23:59.93:575,60,0	1/1:8,10:17:24.75:338,25,0	1/1:6,8:13:30.04:289,30,0	1/1:6,7:13:35.81:350,36,0	0/1:5,11:15:36.77:130,0,37	0/0:27,0:27:81.27:0,81,1133	1/1:3,21:24:72.10:693,72,0	1/1:6,25:31:83.86:761,84,0	1/1:5,2:7:20.87:167,21,0
chr10	101260829	.	AC	A	1200.11	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.123;DP=562;FS=2.332;HRun=1;HaplotypeScore=54.0004;InbreedingCoeff=0.9920;MQ=66.63;MQ0=0;MQRankSum=-2.777;QD=36.37;ReadPosRankSum=2.204;VQSLOD=3.8505;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.25:0,78,1223	0/0:8,0:8:24.08:0,24,384	0/0:8,0:7:21.05:0,21,302	0/0:6,0:6:18.05:0,18,233	0/0:17,0:17:51.17:0,51,815	0/0:27,0:27:78.27:0,78,1247	0/0:20,0:20:60.19:0,60,929	0/0:36,0:36:99:0,108,1660	0/0:19,0:19:57.19:0,57,911	0/0:32,0:32:96.33:0,96,1535	0/0:17,0:17:51.17:0,51,815	0/0:26,0:26:78.27:0,78,1239	0/0:24,0:24:72.23:0,72,1121	0/0:28,0:28:84.29:0,84,1338	0/0:25,0:25:63.20:0,63,982	0/0:21,0:21:54.18:0,54,859	0/0:17,0:17:51.13:0,51,781	0/0:23,0:23:66.22:0,66,1055	0/0:22,0:22:66.21:0,66,1032	0/0:14,0:14:42.14:0,42,671	0/0:13,0:13:39.12:0,39,599	1/1:0,6:6:18.06:252,18,0	1/1:0,12:12:36.12:503,36,0	1/1:0,15:15:42.14:587,42,0	0/0:25,0:25:75.26:0,75,1196	0/0:25,0:25:75.25:0,75,1173	0/0:30,0:30:78.27:0,78,1246	0/0:17,0:17:51.17:0,51,815
chr10	101261199	.	C	CGT	973.79	PASS	AB=0.840;AC=5;AF=0.089;AN=56;BaseQRankSum=-4.416;DP=501;FS=0.000;HRun=0;HaplotypeScore=63.1200;InbreedingCoeff=-0.0946;MQ=66.93;MQ0=8;MQRankSum=-0.330;QD=7.43;ReadPosRankSum=2.386;VQSLOD=3.0543;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,19:33:46.89:657,0,47	0/0:7,0:7:18.05:0,18,208	0/0:32,0:11:9.02:0,9,96	0/1:27,0:12:6.96:7,0,28	0/0:16,0:18:41.75:0,42,429	0/0:22,0:22:38.59:0,39,429	0/0:15,0:15:24.07:0,24,277	0/0:27,0:29:28.46:0,28,295	0/0:9,0:9:15.04:0,15,173	0/0:17,0:18:26.87:0,27,291	0/0:17,0:17:42.12:0,42,484	0/0:15,0:16:32.76:0,33,339	0/0:11,0:13:20.89:0,21,221	0/0:9,0:9:27.08:0,27,312	0/0:12,0:12:18.05:0,18,208	0/1:8,11:19:36.16:387,0,36	0/1:26,2:28:27.11:27,0,625	0/0:17,0:18:38.95:0,39,430	0/0:15,0:15:15.03:0,15,164	0/0:14,0:15:26.91:0,27,291	0/0:17,0:17:39.11:0,39,450	0/0:3,0:5:5.68:0,6,28	0/0:7,0:16:18.03:0,18,95	0/0:2,0:14:28.41:0,28,140	0/0:16,0:17:35.90:0,36,380	0/1:22,0:24:0.02:0,0,387	0/0:20,0:20:42.12:0,42,484	0/0:15,0:15:9.02:0,9,104
chr10	101261309	.	ATTT	A	4142.52	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=7.314;DP=466;FS=1.349;HRun=13;HaplotypeScore=89.2244;InbreedingCoeff=0.9642;MQ=73.12;MQ0=1;MQRankSum=-2.180;QD=24.95;ReadPosRankSum=2.278;VQSLOD=3.1386;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:27:65.67:0,66,531	1/1:0,5:5:15.05:182,15,0	0/0:15,0:13:20.15:0,20,188	0/0:12,0:12:26.96:0,27,323	0/0:20,0:23:63.17:0,63,1078	0/0:24,0:25:69.21:0,69,1264	0/0:13,0:16:39.07:0,39,629	1/1:8,18:26:51.05:595,51,0	0/0:5,0:7:15.05:0,15,259	0/0:11,0:12:36.09:0,36,620	0/0:17,0:20:54.11:0,54,841	0/0:12,0:12:36.11:0,36,606	0/0:18,0:20:51.08:0,51,751	0/0:16,0:17:39.11:0,39,697	1/1:0,25:25:63.16:766,63,0	0/0:2,0:23:50.76:0,51,382	0/0:16,0:20:45.15:0,45,823	1/1:3,10:13:27.05:328,27,0	1/1:7,5:14:16.26:197,16,0	1/1:1,21:22:51.02:619,51,0	1/1:4,4:8:2.95:36,3,0	0/0:10,0:10:30.05:0,30,496	0/0:4,0:8:23.99:0,24,279	0/0:8,0:11:30.05:0,30,445	0/0:21,0:22:63.21:0,63,1130	1/1:4,19:24:63.01:729,63,0	1/1:5,15:21:37.38:471,37,0	1/1:1,7:8:18.05:219,18,0
chr10	101261417	.	AATTTGTAGCATCC	A	2041.60	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.256;DP=586;FS=6.054;HRun=0;HaplotypeScore=208.8112;InbreedingCoeff=0.9986;MQ=83.39;MQ0=0;MQRankSum=-7.154;QD=72.91;ReadPosRankSum=0.969;VQSLOD=3.0302;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:14:24.08:878,24,0	0/0:13,0:13:39.13:0,39,2367	0/0:19,0:19:45.15:0,45,2422	0/0:26,0:26:72.24:0,72,4105	0/0:29,0:29:84.27:0,84,5199	0/0:25,0:25:69.24:0,69,4322	0/0:17,0:17:45.15:0,45,2826	0/0:38,0:38:93.28:0,93,4723	0/0:17,0:17:45.14:0,45,2690	0/0:24,0:24:63.22:0,63,3885	0/0:15,0:15:42.13:0,42,2480	0/0:14,0:14:39.13:0,39,2370	0/0:23,0:23:69.24:0,69,4211	0/0:27,0:27:66.23:0,66,3705	0/0:22,0:22:66.23:0,66,4056	1/1:3,11:14:33.11:1285,33,0	0/0:21,0:21:57.20:0,57,3521	0/0:19,0:19:54.14:0,54,2959	0/0:17,0:17:45.15:0,45,2641	0/0:24,0:24:69.22:0,69,3878	0/0:13,0:13:36.12:0,36,2194	0/0:17,0:17:48.16:0,48,2912	0/0:22,0:22:57.20:0,57,3670	0/0:18,0:18:51.18:0,51,3263	0/0:19,0:19:48.15:0,48,2915	0/0:29,0:29:81.28:0,81,5099	0/0:22,0:22:57.20:0,57,3230	0/0:28,0:28:75.26:0,75,4860
chr10	101261790	.	GTT	G	4311.55	PASS	AB=0.571;AC=25;AF=0.446;AN=56;BaseQRankSum=5.888;DP=515;FS=0.000;HRun=13;HaplotypeScore=75.7637;InbreedingCoeff=0.8949;MQ=67.89;MQ0=1;MQRankSum=-0.920;QD=17.96;ReadPosRankSum=2.022;VQSLOD=4.1773;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:16:32.92:143,33,0	1/1:2,6:8:17.60:174,18,0	0/0:13,0:10:11.65:0,12,138	0/0:11,0:9:8.98:0,9,83	0/0:22,0:23:61.36:0,61,779	0/0:15,0:18:35.09:0,35,443	0/0:7,0:9:19.87:0,20,235	1/1:9,13:22:33.46:288,33,0	0/0:16,0:19:50.11:0,50,606	0/0:23,0:23:51.13:0,51,658	0/0:22,0:22:60.16:0,60,808	0/0:21,1:23:20.83:0,21,700	0/0:18,0:20:53.06:0,53,594	0/0:13,1:14:7:0,7,430	1/1:2,23:25:63.09:611,63,0	1/1:1,0:8:16.47:72,16,0	0/0:19,0:20:41.57:0,42,531	1/1:1,12:14:28.25:313,28,0	1/1:3,13:17:41.73:372,42,0	1/1:5,25:30:71.99:685,72,0	1/1:0,2:4:11.50:82,11,0	0/1:5,2:20:12.21:12,0,216	0/0:5,1:26:13.66:0,14,108	0/0:2,0:11:25.45:0,25,102	0/0:18,0:21:57.17:0,57,766	1/1:5,19:25:56.72:514,57,0	1/1:5,28:33:66.07:639,66,0	1/1:4,14:18:42.01:407,42,0
chr10	101262019	.	T	TTGTG	6447.89	PASS	AB=0.620;AC=21;AF=0.375;AN=56;BaseQRankSum=8.377;DP=934;FS=26.997;HRun=0;HaplotypeScore=197.4518;InbreedingCoeff=0.6183;MQ=68.31;MQ0=11;MQRankSum=-0.216;QD=15.57;ReadPosRankSum=1.310;VQSLOD=2.8075;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:7.31:0,7,38	0/1:3,0:13:69.95:82,0,70	0/0:65,0:42:69.11:0,69,1053	0/0:55,0:38:41.83:0,42,868	0/0:30,0:30:72.23:0,72,1178	0/0:27,0:27:51.07:0,51,853	0/0:19,0:19:39.59:0,40,633	0/1:24,0:37:82.21:270,0,82	0/0:37,0:37:99:0,105,1763	0/0:47,0:47:99:0,117,1949	0/0:25,0:27:60.20:0,60,990	0/0:35,0:35:99:0,99,1583	0/0:45,0:45:99:0,99,1602	0/0:27,0:29:65.02:0,65,1045	1/1:11,0:46:21.96:279,22,0	0/0:21,0:21:13.84:0,14,99	0/0:26,0:26:72.24:0,72,1190	0/1:7,0:21:7.37:180,0,7	1/1:11,0:18:24.41:120,24,0	1/1:8,0:33:49.71:230,50,0	1/1:11,0:45:63.08:501,63,0	1/1:3,27:31:36.12:896,36,0	1/1:8,21:34:56.66:1293,57,0	1/1:6,34:45:89.34:1992,89,0	0/0:32,0:34:84.25:0,84,1314	0/1:15,0:37:70.08:267,0,70	1/1:11,0:32:52.37:244,52,0	0/1:4,0:14:20.19:94,0,20
chr10	101262033	.	G	GCA	302.94	PASS	AB=0.874;AC=5;AF=0.089;AN=56;BaseQRankSum=6.860;DP=988;FS=0.716;HRun=0;HaplotypeScore=185.2604;InbreedingCoeff=0.2324;MQ=55.68;MQ0=27;MQRankSum=-5.986;QD=4.04;ReadPosRankSum=1.803;VQSLOD=2.9513;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,10:17:8.82:118,9,0	0/0:14,0:14:10.56:0,11,150	0/0:78,0:30:84.14:0,84,1250	0/0:73,0:33:82.37:0,82,1295	0/0:32,0:32:93.28:0,93,1430	0/0:24,0:24:63.08:0,63,986	0/0:20,0:20:57.18:0,57,888	0/0:48,0:46:99:0,109,1195	0/0:47,0:47:99:0,130,2159	0/0:43,0:43:99:0,126,2022	0/0:27,0:27:75.17:0,75,1172	0/0:38,0:38:99:0,111,1754	0/0:38,0:38:99:0,111,1714	0/0:30,0:30:81.11:0,81,1201	0/0:45,0:44:25.97:0,26,334	0/1:7,11:18:31.05:238,0,31	0/0:28,0:28:84.02:0,84,1308	0/0:25,0:25:2.46:0,2,322	0/1:13,0:12:27.01:27,0,53	0/0:31,0:29:6.76:0,7,114	0/0:67,0:66:78.67:0,79,921	0/0:31,0:31:50.36:0,50,485	0/0:32,0:32:57.22:0,57,457	0/0:47,0:47:81.02:0,81,821	0/0:35,0:34:93.06:0,93,1413	0/0:37,0:37:79.26:0,79,645	0/1:26,0:25:33.52:36,0,34	0/0:21,0:21:6.06:0,6,370
chr10	101262037	.	A	ACGCACG	162.30	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=5.929;DP=1003;FS=14.901;HRun=0;HaplotypeScore=255.1011;InbreedingCoeff=0.5276;MQ=54.92;MQ0=30;MQRankSum=-4.263;QD=4.06;ReadPosRankSum=-2.066;VQSLOD=0.8317;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,4:18:5.02:64,5,0	0/0:14,0:14:39.13:0,39,912	0/0:82,0:28:78.22:0,78,1754	0/0:78,0:35:88.36:0,88,2099	0/0:31,0:31:93.30:0,93,2309	0/0:26,0:27:68.96:0,69,1565	0/0:21,0:21:57.20:0,57,1454	0/0:49,0:47:99:0,132,2867	0/0:49,0:49:99:0,140,3472	0/0:43,0:43:99:0,126,3025	0/0:27,0:27:72.25:0,72,1841	0/0:41,0:41:99:0,123,2952	0/0:37,0:37:99:0,108,2607	0/0:29,0:29:84.27:0,84,2082	0/0:43,0:41:95.08:0,95,2269	0/1:21,0:21:99:192,0,122	0/0:27,0:28:84.29:0,84,2101	0/0:27,0:27:72.67:0,73,1585	0/0:15,0:14:33.10:0,33,632	0/0:29,0:27:60.21:0,60,1358	0/0:67,0:66:99:0,181,4146	0/0:29,0:29:53.52:0,54,1006	0/0:30,0:30:65.71:0,66,1093	0/0:46,0:46:99:0,111,1921	0/0:34,0:33:93.30:0,93,2308	0/0:36,0:36:99:0,105,2494	0/0:24,0:23:63.18:0,63,1368	0/0:23,0:23:60.18:0,60,1335
chr10	101262153	.	ATG	A	7655.39	PASS	AB=0.792;AC=23;AF=0.411;AN=56;BaseQRankSum=11.634;DP=1090;FS=1.661;HRun=0;HaplotypeScore=184.2676;InbreedingCoeff=0.8075;MQ=53.38;MQ0=31;MQRankSum=-0.106;QD=17.09;ReadPosRankSum=0.220;VQSLOD=4.4289;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,3:17:0.04:1,0,0	1/1:9,6:15:38.95:455,39,0	0/0:46,0:11:25.31:0,25,343	0/0:48,0:10:9.32:0,9,92	0/0:37,0:37:87.24:0,87,1327	0/0:32,0:31:63.13:0,63,961	0/0:39,1:40:41.62:0,42,1143	1/1:48,16:59:13.53:736,14,0	0/0:41,2:43:33.98:0,34,1562	0/0:47,0:45:96.31:0,96,1519	0/1:15,2:16:29.21:29,0,586	0/0:48,0:49:99:0,103,1752	0/0:45,1:46:65.14:0,65,1560	0/0:48,2:50:89.21:0,89,1885	1/1:18,31:49:81.20:953,81,0	0/1:10,7:15:33.05:33,0,38	0/0:35,1:36:44.59:0,45,1261	1/1:8,12:20:10.12:445,10,0	1/1:25,7:20:29.92:346,30,0	1/1:10,24:34:66.03:782,66,0	1/1:47,51:96:99:1945,163,0	0/0:36,1:37:49.12:0,49,1268	0/0:24,1:25:29.04:0,29,973	0/0:66,0:66:99:0,120,1918	0/0:38,0:39:74.98:0,75,1235	1/1:20,17:34:63.18:761,63,0	1/1:4,30:35:79.89:947,80,0	1/1:2,8:9:18.06:223,18,0
chr10	101262202	.	TGC	T	591.59	PASS	AB=0.952;AC=9;AF=0.161;AN=56;BaseQRankSum=10.748;DP=1147;FS=2.154;HRun=0;HaplotypeScore=265.8056;InbreedingCoeff=0.0576;MQ=51.58;MQ0=32;MQRankSum=-6.528;QD=2.16;ReadPosRankSum=-5.689;VQSLOD=1.3489;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,4:28:9.60:79,10,0	0/0:11,0:11:3.07:0,3,260	0/1:52,0:3:9.88:23,0,10	0/0:68,0:7:6.74:0,7,105	0/0:30,0:30:82.95:0,83,1341	0/0:31,0:31:77.96:0,78,1237	0/0:30,1:31:60.03:0,60,983	0/1:50,0:47:99:179,0,391	0/0:52,0:51:99:0,124,2089	0/0:42,0:42:83.43:0,83,1552	0/0:21,0:21:33.76:0,34,779	0/0:62,0:62:96.14:0,96,2465	0/0:54,0:54:99:0,100,2232	0/0:60,0:60:99:0,138,2296	0/0:51,0:51:54.71:0,55,938	0/1:29,9:34:7.14:302,0,7	0/0:32,0:32:68.88:0,69,1413	0/1:25,0:24:55.38:55,0,424	0/1:23,4:20:42.16:42,0,294	0/0:30,0:28:14.23:0,14,467	0/0:98,5:98:14.01:0,14,1464	0/0:42,1:43:92.60:0,93,1548	0/0:22,0:22:45.05:0,45,753	0/0:62,0:62:99:0,116,2229	0/0:34,0:34:64.16:0,64,1227	0/1:42,0:39:21.25:21,0,597	0/0:32,1:33:1.56:0,2,554	0/1:11,0:11:31.56:32,0,122
chr10	101262204	.	CGT	C	1000.54	PASS	AB=0.956;AC=11;AF=0.196;AN=56;BaseQRankSum=5.864;DP=1144;FS=6.398;HRun=0;HaplotypeScore=262.3420;InbreedingCoeff=0.1536;MQ=50.94;MQ0=32;MQRankSum=-5.047;QD=2.57;ReadPosRankSum=-3.250;VQSLOD=1.4600;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,10:26:9:65,9,0	0/1:11,0:11:11.79:12,0,105	0/0:51,1:3:2.92:0,3,8	0/0:66,0:6:9.03:0,9,146	0/0:29,0:29:81.13:0,81,1183	0/0:32,0:32:66.13:0,66,1061	0/0:33,0:33:54.38:0,54,808	0/1:52,0:49:1.71:297,0,2	0/0:51,0:50:99:0,116,1936	0/0:41,1:42:58.67:0,59,1344	0/0:20,1:21:9.99:0,10,632	0/0:59,2:61:47.81:0,48,2056	0/0:54,0:54:99:0,119,1910	0/0:59,1:60:81.10:0,81,2024	0/1:48,5:53:66.94:67,0,325	1/1:19,19:34:2.94:353,3,0	0/0:31,0:31:38.86:0,39,1192	0/0:24,1:24:1.63:0,2,183	0/0:25,1:18:10.35:0,10,148	0/1:25,4:27:67.41:67,0,160	0/1:98,5:99:77.71:78,0,695	0/0:43,0:43:77.80:0,78,1199	0/0:21,0:21:36.12:0,36,583	0/0:64,0:64:99:0,118,1906	0/0:31,1:32:29.07:0,29,952	0/1:42,1:40:94.54:95,0,333	0/1:32,1:33:99:112,0,267	0/0:10,0:10:10.96:0,11,81
chr10	101262217	.	G	GTA	12612.21	PASS	AB=0.727;AC=18;AF=0.321;AN=56;BaseQRankSum=-8.391;DP=1171;FS=16.062;HRun=0;HaplotypeScore=248.2943;InbreedingCoeff=0.7945;MQ=50.54;MQ0=26;MQRankSum=3.346;QD=29.61;ReadPosRankSum=-0.754;VQSLOD=3.4959;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:1.32:0,1,65	1/1:2,12:14:24.08:440,24,0	0/0:38,0:4:11.97:0,12,117	0/0:61,0:5:11.97:0,12,155	0/0:33,0:33:96.12:0,96,1287	0/0:29,0:29:71.88:0,72,1051	0/0:31,0:31:71.34:0,71,907	1/1:11,49:56:99:1857,102,0	0/0:56,0:54:99:0,148,2024	0/0:48,0:47:99:0,126,1596	0/0:20,0:19:53.04:0,53,706	0/0:59,0:59:99:0,169,2215	0/0:50,0:50:99:0,141,1952	0/0:60,0:60:99:0,162,2190	1/1:14,47:62:79.55:1461,80,0	0/0:39,0:36:42.50:0,42,270	0/0:33,0:32:92.43:0,92,1237	0/1:13,11:23:37.59:666,0,38	1/1:23,8:21:49.58:777,50,0	1/1:10,21:30:42:744,42,0	1/1:67,42:102:99:3378,208,0	0/0:44,0:43:77.96:0,78,1144	0/0:23,0:23:36.01:0,36,546	0/0:62,0:62:99:0,123,1809	0/0:29,0:29:75.07:0,75,1041	1/1:5,46:48:99:1965,106,0	1/1:12,19:30:37.21:1115,37,0	0/1:7,3:10:54.36:209,0,54
chr10	101262267	.	A	ATG	1326.06	PASS	AB=0.713;AC=3;AF=0.054;AN=56;BaseQRankSum=8.026;DP=1279;FS=10.591;HRun=0;HaplotypeScore=300.4498;InbreedingCoeff=0.5842;MQ=54.39;MQ0=18;MQRankSum=-3.525;QD=13.96;ReadPosRankSum=1.144;VQSLOD=2.3441;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,23:37:16.99:541,17,0	0/0:12,0:12:21.02:0,21,272	0/0:66,0:24:57.97:0,58,645	0/0:67,0:24:50.94:0,51,606	0/0:37,0:37:99:0,99,1253	0/0:44,0:44:99:0,111,1357	0/0:33,0:33:81.25:0,81,1038	0/0:64,0:60:99:0,115,1695	0/0:53,0:53:99:0,131,1617	0/0:64,0:64:99:0,168,2102	0/0:24,0:24:60.15:0,60,748	0/0:62,0:62:99:0,174,2222	0/0:53,0:53:99:0,132,1714	0/0:61,0:61:99:0,150,1902	0/0:58,0:58:99:0,102,1295	0/1:34,23:55:59.75:888,0,60	0/0:38,0:37:84.75:0,85,1109	0/0:25,0:24:62.69:0,63,746	0/0:24,0:23:57.12:0,57,693	0/0:30,0:29:72.21:0,72,907	0/0:127,0:119:99:0,250,3145	0/0:38,0:37:8.99:0,9,95	0/0:26,0:26:8.87:0,9,90	0/0:42,0:42:34.35:0,34,412	0/0:33,0:33:75.22:0,75,958	0/0:57,0:56:93.98:0,94,1515	0/0:26,0:24:54.17:0,54,700	0/0:19,0:19:20.48:0,20,448
chr10	101262271	.	GTGTGTATGCA	G	703.35	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.437;DP=1275;FS=3.244;HRun=0;HaplotypeScore=458.0865;InbreedingCoeff=0.9658;MQ=54.11;MQ0=15;MQRankSum=-5.142;QD=7.03;ReadPosRankSum=-4.342;VQSLOD=-0.5770;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:36.09:0,36,1179	0/0:12,0:12:21:0,21,916	0/0:58,0:24:44.14:0,44,1081	0/0:65,0:25:56.65:0,57,1120	0/0:37,0:37:99:0,99,3589	0/0:43,0:43:70.70:0,71,4328	0/0:30,0:30:78.23:0,78,2921	0/0:67,0:63:99:0,147,4035	0/0:52,0:52:99:0,108,4325	0/0:66,0:66:99:0,174,6602	0/0:23,0:23:56.80:0,57,2017	0/0:63,0:63:99:0,140,5753	0/0:49,0:49:99:0,131,5119	0/0:63,0:63:99:0,162,6110	0/0:59,0:59:98.54:0,99,3985	0/0:58,0:56:27.43:0,27,2101	0/0:36,0:35:67.96:0,68,3573	0/0:25,0:25:56.91:0,57,2225	0/0:27,0:25:63.15:0,63,1933	0/0:30,0:29:72.18:0,72,2986	0/0:126,0:118:99:0,240,9034	1/1:4,31:34:12.34:145,12,0	1/1:3,22:25:8.92:144,9,0	1/1:28,12:40:41.60:548,42,0	0/0:34,0:34:78.19:0,78,3326	0/0:62,0:62:99:0,147,5388	0/0:28,0:26:59.90:0,60,2232	0/0:20,0:20:36.49:0,36,1803
chr10	101262366	.	ATG	A	1198.74	PASS	AB=0.746;AC=2;AF=0.038;AN=52;BaseQRankSum=8.994;DP=1412;FS=38.852;HRun=0;HaplotypeScore=255.2346;InbreedingCoeff=-0.0400;MQ=50.36;MQ0=99;MQRankSum=0.475;QD=6.66;ReadPosRankSum=-1.094;VQSLOD=1.6597;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:57,43:93:99:943,0,468	0/0:14,0:13:36.12:0,36,593	./.	./.	0/0:34,0:34:90.29:0,90,1479	0/0:23,0:23:57.15:0,57,937	0/0:43,0:42:81.26:0,81,1351	0/0:68,0:59:99:0,129,2048	0/0:47,0:47:99:0,123,2044	0/0:85,0:80:99:0,217,3592	0/0:22,0:21:60.21:0,60,1018	0/0:65,0:65:99:0,178,2964	0/0:58,0:58:99:0,156,2567	0/0:64,0:64:99:0,166,2755	0/0:51,0:51:99:0,129,2125	0/1:55,21:72:99:344,0,891	0/0:39,0:40:59.29:0,59,1522	0/0:38,0:38:99:0,99,1571	0/0:38,0:22:49.68:0,50,779	0/0:54,0:52:99:0,107,1760	0/0:118,0:110:99:0,268,4439	0/0:47,0:46:87.22:0,87,1487	0/0:31,0:31:81.26:0,81,1356	0/0:54,0:57:99:0,126,2094	0/0:32,0:31:81.28:0,81,1389	0/0:50,0:47:99:0,120,1930	0/0:32,0:32:62.64:0,63,977	0/0:23,0:22:54.10:0,54,867
chr10	101262426	.	ATG	A	5235.45	PASS	AB=0.666;AC=8;AF=0.143;AN=56;BaseQRankSum=5.773;DP=1431;FS=5.927;HRun=0;HaplotypeScore=258.6187;InbreedingCoeff=0.6469;MQ=50.61;MQ0=76;MQRankSum=0.557;QD=18.77;ReadPosRankSum=-0.778;VQSLOD=3.5368;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:85,0:79:99:0,150,2404	0/0:24,0:22:54.14:0,54,820	0/0:42,0:3:5.87:0,6,40	0/0:52,0:3:3.01:0,3,51	0/0:43,0:42:99:0,108,1720	0/0:30,0:30:84.25:0,84,1318	0/0:38,0:37:71.57:0,72,1134	0/1:47,19:34:58.44:591,0,58	0/0:59,0:56:99:0,147,2317	0/0:81,2:79:99:0,176,3355	0/0:21,0:21:60.19:0,60,959	0/0:55,0:53:99:0,132,2128	0/0:64,0:64:99:0,169,2721	0/0:59,0:59:99:0,156,2484	0/0:62,0:61:99:0,165,2636	0/0:87,0:76:93.47:0,93,2176	0/0:35,0:32:74.72:0,75,1245	0/0:29,0:29:66.30:0,66,1111	1/1:25,9:27:16.32:685,16,0	1/1:10,34:40:23.77:726,24,0	1/1:47,58:97:99:2813,225,0	0/0:55,0:48:84.02:0,84,1337	0/0:28,0:25:54.10:0,54,856	0/0:87,0:84:99:0,193,2996	0/0:29,0:27:75.24:0,75,1212	0/0:58,0:52:99:0,147,2436	0/1:6,24:27:18.56:421,0,19	0/0:27,0:26:66.23:0,66,1102
chr10	101262471	.	T	TGC	168.01	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.416;DP=1189;FS=9.138;HRun=0;HaplotypeScore=203.8199;InbreedingCoeff=0.9101;MQ=52.29;MQ0=44;MQRankSum=-3.068;QD=5.79;ReadPosRankSum=0.171;VQSLOD=2.0214;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,1:7:6.02:98,6,0	0/0:19,0:18:39.12:0,39,575	0/0:43,0:10:21.03:0,21,275	0/0:46,0:10:20.67:0,21,263	0/0:30,0:30:87.25:0,87,1264	0/0:27,0:27:76.14:0,76,1149	0/0:44,0:44:99:0,106,1577	0/0:73,0:61:99:0,153,2195	0/0:41,0:41:99:0,111,1644	0/0:71,0:69:99:0,201,2923	0/0:27,0:27:81.26:0,81,1215	0/0:46,0:45:99:0,126,1919	0/0:49,0:49:99:0,138,2010	0/0:66,0:66:99:0,190,2839	0/0:65,0:64:99:0,178,2613	1/1:16,4:14:9.83:173,10,0	0/0:27,0:27:72.72:0,73,1102	0/0:26,0:26:75.56:0,76,1087	0/0:40,0:28:72.16:0,72,1033	0/0:39,0:39:90.19:0,90,1259	0/0:92,0:87:99:0,241,3522	0/0:46,0:39:81.28:0,81,1237	0/0:29,0:27:63.15:0,63,879	0/0:80,0:78:99:0,168,2734	0/0:31,0:30:83.91:0,84,1262	0/0:61,0:58:99:0,167,2450	0/0:28,0:27:57.13:0,57,788	0/0:11,0:10:27.09:0,27,413
chr10	101262635	.	ATG	A	157.64	PASS	AB=0.860;AC=4;AF=0.071;AN=56;BaseQRankSum=4.586;DP=1195;FS=30.386;HRun=0;HaplotypeScore=221.8616;InbreedingCoeff=0.4801;MQ=50.47;MQ0=76;MQRankSum=-2.777;QD=1.19;ReadPosRankSum=-4.034;VQSLOD=0.5497;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,13:35:33.82:99,0,34	0/0:18,0:18:28.83:0,29,445	0/0:52,0:4:11.64:0,12,119	0/0:52,0:5:11.91:0,12,148	0/0:24,0:24:60:0,60,943	0/0:37,0:37:70.81:0,71,1615	0/0:34,1:34:40.36:0,40,1181	0/0:54,0:46:99:0,102,1525	0/0:52,1:52:42.11:0,42,1717	0/0:69,0:64:99:0,169,2693	0/0:26,0:25:66.23:0,66,1088	0/0:55,0:54:99:0,128,2208	0/0:56,1:56:99:0,141,2273	0/0:56,0:55:99:0,138,2177	0/0:59,0:54:99:0,111,1785	1/1:29,18:32:14.16:160,14,0	0/0:36,3:39:46.42:0,46,1248	0/0:27,0:23:42.10:0,42,656	0/0:30,0:19:51.16:0,51,822	0/0:33,0:30:59.52:0,60,969	0/0:94,0:84:99:0,120,2484	0/0:31,0:31:50.26:0,50,838	0/0:28,0:27:51.16:0,51,821	0/1:41,2:39:2.59:3,0,511	0/0:46,0:46:99:0,102,1597	0/0:48,1:42:70.35:0,70,1606	0/0:26,0:26:66.05:0,66,1051	0/0:12,0:12:21.07:0,21,349
chr10	101262665	.	A	ATG	9919.92	PASS	AB=0.789;AC=27;AF=0.482;AN=56;BaseQRankSum=0.603;DP=1110;FS=2.069;HRun=0;HaplotypeScore=214.2662;InbreedingCoeff=0.7541;MQ=50.36;MQ0=41;MQRankSum=0.653;QD=19.30;ReadPosRankSum=-2.029;VQSLOD=4.7163;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,15:19:1.52:49,2,0	1/1:3,10:13:12.01:203,12,0	0/0:55,1:10:26.59:0,27,271	0/0:58,0:11:19.85:0,20,222	0/0:26,0:26:63.20:0,63,814	0/0:38,0:38:99:0,102,1289	0/0:48,0:46:99:0,105,1285	0/1:47,2:31:99:604,0,129	0/0:43,0:43:99:0,105,1347	0/0:67,0:65:99:0,180,2192	0/0:19,0:19:44.87:0,45,536	0/0:52,0:51:99:0,126,1572	0/0:54,0:54:99:0,141,1795	0/0:52,0:52:99:0,135,1662	1/1:24,30:50:87.20:1291,87,0	0/1:13,23:29:10.57:174,0,11	0/0:42,4:46:19:0,19,1172	1/1:12,9:19:33.11:505,33,0	0/1:23,8:21:29.59:527,0,30	1/1:11,14:24:42.11:661,42,0	1/1:42,40:69:53.16:1849,53,0	1/1:14,24:38:33.07:526,33,0	1/1:11,12:21:39.12:605,39,0	1/1:15,18:29:27.04:437,27,0	0/0:34,0:34:84.69:0,85,1061	1/1:21,22:35:90.16:1335,90,0	1/1:15,14:29:60.18:877,60,0	1/1:3,10:13:18.03:277,18,0
chr10	101262698	.	GGT	G	7661.16	PASS	AB=0.671;AC=28;AF=0.500;AN=56;BaseQRankSum=12.789;DP=1080;FS=1.315;HRun=0;HaplotypeScore=236.5784;InbreedingCoeff=0.8312;MQ=47.21;MQ0=50;MQRankSum=-5.711;QD=15.20;ReadPosRankSum=-3.878;VQSLOD=3.6678;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:28:11.53:29,0,12	1/1:2,4:6:5.94:71,6,0	0/0:64,1:6:6.01:0,6,74	0/0:55,0:8:15.04:0,15,197	0/0:26,0:27:57.19:0,57,878	0/0:35,0:35:81.23:0,81,1241	0/0:43,0:42:99:0,102,1577	1/1:41,13:33:34.82:568,35,0	0/0:43,0:41:99:0,102,1587	0/0:60,3:60:24.60:0,25,1826	0/0:19,0:19:48.16:0,48,774	0/0:46,5:51:34.24:0,34,1540	0/0:46,1:47:77.43:0,77,1684	0/0:56,0:56:99:0,141,2244	1/1:12,32:42:78.12:935,78,0	1/1:9,0:44:57.42:338,57,0	0/0:35,1:39:47.20:0,47,1112	1/1:6,11:17:31.06:380,31,0	1/1:23,9:21:33.10:404,33,0	1/1:6,16:22:41.65:493,42,0	1/1:44,50:85:99:2004,168,0	1/1:9,32:40:56.79:687,57,0	1/1:3,12:14:26.95:315,27,0	0/1:16,9:24:14.93:65,0,15	0/0:30,1:31:35.28:0,35,1058	1/1:17,23:30:72.21:859,72,0	1/1:2,13:14:24.03:292,24,0	1/1:7,4:11:18.06:220,18,0
chr10	101262714	.	TGC	T	2686.16	PASS	AB=0.995;AC=18;AF=0.321;AN=56;BaseQRankSum=15.381;DP=1076;FS=7.602;HRun=0;HaplotypeScore=259.3423;InbreedingCoeff=0.0365;MQ=48.17;MQ0=32;MQRankSum=-2.445;QD=5.24;ReadPosRankSum=4.318;VQSLOD=1.8375;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,1:32:0.69:1,0,50	0/1:9,0:9:4.20:43,0,4	0/0:66,1:6:14.63:0,15,124	0/0:60,0:10:9.67:0,10,210	0/0:24,0:24:63.01:0,63,943	0/0:33,2:35:83.88:0,84,1386	0/0:44,0:44:99:0,104,1878	0/1:48,1:38:99:149,0,219	0/0:41,0:39:99:0,105,1893	0/0:56,0:55:97.24:0,97,2179	0/0:20,0:20:35.13:0,35,876	0/0:46,0:45:64.81:0,65,1859	0/0:47,0:47:99:0,115,1964	0/0:52,0:52:99:0,135,2552	1/1:37,0:37:30.85:367,31,0	0/1:55,0:50:50.24:71,0,50	0/0:32,2:34:43.31:0,43,1231	1/1:16,0:14:2.12:156,2,0	0/1:23,0:17:54.92:134,0,55	0/1:28,0:26:13.08:227,0,13	0/1:100,1:91:73.48:615,0,73	0/1:44,0:43:18.68:292,0,19	0/1:19,0:18:35.47:135,0,35	0/1:33,0:30:8.89:9,0,113	0/0:36,0:36:72.96:0,73,1366	0/1:42,0:35:48.51:419,0,49	0/1:16,0:15:18.26:116,0,18	1/1:8,0:8:19.84:120,20,0
chr10	101262731	.	ATG	A	2608.97	PASS	AB=0.921;AC=11;AF=0.196;AN=56;BaseQRankSum=8.003;DP=1144;FS=26.547;HRun=0;HaplotypeScore=260.4925;InbreedingCoeff=0.6418;MQ=49.09;MQ0=25;MQRankSum=-0.064;QD=10.83;ReadPosRankSum=-1.814;VQSLOD=1.5275;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:25:15.18:98,0,15	0/0:12,0:12:24.05:0,24,338	0/0:77,0:9:18.05:0,18,267	0/0:85,0:16:28.33:0,28,364	0/1:19,4:23:18.41:18,0,693	0/0:29,1:30:19.68:0,20,819	0/0:43,0:43:99:0,99,1527	0/0:60,2:57:94.61:0,95,1949	0/0:43,0:42:99:0,108,1684	0/0:45,3:47:6.41:0,6,1572	0/0:25,0:25:72.22:0,72,1129	0/0:46,2:48:14.01:0,14,1756	0/0:47,1:48:73.82:0,74,1617	0/0:53,1:54:99:0,104,2207	0/0:42,0:42:98.52:0,99,1521	1/1:53,1:50:65.22:774,65,0	0/0:29,0:30:71.01:0,71,1078	0/0:21,0:19:48.16:0,48,772	0/0:20,0:19:42.14:0,42,678	0/0:31,1:31:43.78:0,44,1172	0/0:115,3:109:99:0,140,3427	1/1:17,30:47:74.70:825,75,0	1/1:8,14:21:44.92:506,45,0	1/1:15,23:34:41.90:524,42,0	0/1:28,3:31:34.26:34,0,992	0/0:38,0:35:87.20:0,87,1365	0/0:17,0:16:33.11:0,33,526	0/0:10,0:10:18.06:0,18,297
chr10	101262773	.	A	ATG	1395.49	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.581;DP=1211;FS=6.165;HRun=0;HaplotypeScore=255.2579;InbreedingCoeff=0.9814;MQ=50.86;MQ0=40;MQRankSum=-6.245;QD=20.83;ReadPosRankSum=-2.804;VQSLOD=2.3995;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,21:28:38.98:689,39,0	0/0:11,0:11:30.10:0,30,382	0/0:103,0:16:36.10:0,36,431	0/0:109,0:12:21.03:0,21,245	0/0:28,0:28:72.19:0,72,882	0/0:29,0:29:63.06:0,63,774	0/0:43,0:42:99:0,99,1214	0/0:44,0:41:99:0,99,1232	0/0:37,0:36:78.06:0,78,929	0/0:44,0:44:99:0,105,1317	0/0:32,0:32:84.16:0,84,1045	0/0:61,0:60:99:0,138,1725	0/0:43,0:43:99:0,104,1301	0/0:49,0:48:99:0,111,1383	0/0:32,0:30:57.07:0,57,722	1/1:15,22:33:56.84:829,57,0	0/0:26,0:26:62.89:0,63,747	0/0:30,0:28:32.66:0,33,686	0/0:28,0:21:28.41:0,28,482	0/0:37,0:36:84.05:0,84,1065	0/0:133,0:123:99:0,249,3139	0/0:47,0:47:92.84:0,93,1182	0/0:27,0:26:59.92:0,60,729	0/0:51,0:48:72.83:0,73,1036	0/0:32,0:32:89.88:0,90,1082	0/0:38,0:38:99:0,105,1305	0/0:18,0:18:41.95:0,42,496	0/0:10,0:10:12.04:0,12,148
chr10	101262811	.	A	ATG	9954.96	PASS	AB=0.734;AC=21;AF=0.375;AN=56;BaseQRankSum=5.746;DP=1132;FS=2.604;HRun=0;HaplotypeScore=205.6463;InbreedingCoeff=0.4790;MQ=54.36;MQ0=31;MQRankSum=3.929;QD=17.19;ReadPosRankSum=-0.767;VQSLOD=4.7420;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:74.03:0,74,884	0/1:7,13:20:2.51:412,0,3	0/0:71,0:23:19.29:0,19,175	0/1:83,1:26:41.76:42,0,128	0/0:29,0:30:60.01:0,60,689	0/0:26,0:26:45.01:0,45,522	0/0:41,1:41:33.50:0,33,861	0/1:34,8:39:28.94:481,0,29	0/0:39,0:41:83.87:0,84,952	0/0:36,0:36:69.21:0,69,818	0/0:32,1:36:18.11:0,18,623	0/0:55,0:57:99:0,126,1449	0/0:43,0:42:93.26:0,93,1088	0/0:42,0:43:87.04:0,87,973	1/1:11,20:29:9.59:616,10,0	0/0:32,0:27:48.04:0,48,567	0/0:29,0:28:63.19:0,63,746	1/1:18,16:35:57.55:995,58,0	0/1:22,5:16:52.57:173,0,53	0/1:12,30:41:5.13:882,0,5	1/1:69,40:104:68.35:2079,68,0	0/1:12,24:35:19.76:655,0,20	1/1:10,14:24:3.83:514,4,0	0/1:30,25:53:16.35:1134,0,16	0/0:29,0:29:60.18:0,60,711	1/1:12,26:37:39.69:1080,40,0	1/1:4,19:23:15.62:725,16,0	1/1:4,6:10:13.24:166,13,0
chr10	101263263	.	AT	A	697.98	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.870;DP=647;FS=0.000;HRun=9;HaplotypeScore=68.4194;InbreedingCoeff=0.9951;MQ=78.90;MQ0=0;MQRankSum=0.148;QD=17.90;ReadPosRankSum=2.415;VQSLOD=3.9172;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,16:21:45.01:410,45,0	0/0:13,0:13:36.11:0,36,415	0/0:18,0:18:38.28:0,38,425	0/0:18,0:17:18.66:0,19,223	0/0:28,0:29:84.08:0,84,949	0/0:35,0:35:93.28:0,93,1073	0/0:16,0:16:39.12:0,39,450	0/0:36,0:36:84.23:0,84,953	0/0:24,1:25:41.74:0,42,734	0/0:29,0:29:81.23:0,81,927	0/0:21,0:21:54.16:0,54,623	0/0:27,0:27:81.24:0,81,934	0/0:34,0:34:87.26:0,87,1003	0/0:19,0:19:54.12:0,54,608	0/0:26,0:26:72.21:0,72,829	1/1:2,16:18:45.02:410,45,0	0/0:17,0:17:51.12:0,51,568	0/0:24,0:24:66.20:0,66,762	0/0:23,0:23:60.18:0,60,693	0/0:19,0:19:51.15:0,51,588	0/0:23,0:23:60.17:0,60,682	0/0:21,0:21:57.15:0,57,641	0/0:21,0:21:51.13:0,51,571	0/0:13,0:13:36.08:0,36,403	0/0:29,0:29:81.23:0,81,927	0/0:27,0:27:69.16:0,69,782	0/0:36,0:36:90.26:0,90,1029	0/0:9,0:9:24.07:0,24,277
chr10	101263493	.	T	TCTGTAAGGTTGGCCTA	2531.39	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.140;DP=654;FS=1.032;HRun=0;HaplotypeScore=267.5926;InbreedingCoeff=0.9679;MQ=87.33;MQ0=0;MQRankSum=-5.722;QD=84.38;ReadPosRankSum=-0.271;VQSLOD=2.7789;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:15:9.03:507,9,0	0/0:13,0:13:39.13:0,39,1792	0/0:28,0:28:68.06:0,68,2399	0/0:18,0:18:54.08:0,54,1794	0/0:41,0:41:99:0,123,4830	0/0:37,0:37:99:0,108,4926	0/0:15,0:15:42.14:0,42,1762	0/0:29,0:29:84.25:0,84,2943	0/0:15,0:15:45.14:0,45,2026	0/0:24,0:24:72.21:0,72,2774	0/0:23,0:23:66.23:0,66,2870	0/0:21,0:21:60.19:0,60,2361	0/0:25,0:25:72.23:0,72,3202	0/0:22,0:22:66.23:0,66,2946	0/0:24,0:24:69.22:0,69,2949	1/1:4,6:15:30.08:2139,30,0	0/0:15,0:14:45.13:0,45,1780	0/0:22,0:22:61.79:0,62,2669	0/0:24,0:24:63.13:0,63,2239	0/0:39,0:39:99:0,117,5343	0/0:24,0:24:72.18:0,72,2985	0/0:19,0:19:57.17:0,57,2527	0/0:29,0:29:87.23:0,87,3392	0/0:16,0:16:45.15:0,45,1894	0/0:20,0:20:60.19:0,60,2674	0/0:27,0:27:81.26:0,81,3323	0/0:46,0:46:99:0,135,5767	0/0:8,0:8:24.08:0,24,1090
chr10	101265115	.	ACTT	A	2213.35	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.928;DP=765;FS=0.542;HRun=0;HaplotypeScore=107.4913;InbreedingCoeff=0.9883;MQ=89.10;MQ0=0;MQRankSum=-5.872;QD=32.08;ReadPosRankSum=2.876;VQSLOD=4.2711;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,32:36:69.24:1125,69,0	0/0:8,0:8:24.06:0,24,491	0/0:29,0:29:84.24:0,84,1700	0/0:31,0:30:81.22:0,81,1572	0/0:23,0:23:63.20:0,63,1312	0/0:19,0:19:51.16:0,51,1096	0/0:16,0:16:48.15:0,48,1030	0/0:31,0:31:84.28:0,84,1839	0/0:33,0:33:96.32:0,96,2104	0/0:39,0:39:99:0,111,2433	0/0:22,0:22:60.18:0,60,1257	0/0:27,0:27:78.17:0,78,1648	0/0:41,0:41:99:0,114,2418	0/0:29,0:29:75.24:0,75,1588	0/0:38,0:38:99:0,111,2318	1/1:1,32:33:14.23:1206,14,0	0/0:23,0:23:63.22:0,63,1407	0/0:11,0:11:30.10:0,30,670	0/0:27,0:27:78.23:0,78,1521	0/0:40,0:40:99:0,114,2427	0/0:25,0:25:75.18:0,75,1543	0/0:28,0:28:75.26:0,75,1660	0/0:28,0:28:78.24:0,78,1618	0/0:24,0:24:63.22:0,63,1408	0/0:20,0:20:51.17:0,51,1080	0/0:28,0:28:81.27:0,81,1769	0/0:47,0:47:99:0,141,3064	0/0:9,0:9:27.09:0,27,603
chr10	101266050	.	TATCATC	T	2484.94	PASS	AB=0.699;AC=20;AF=0.400;AN=50;BaseQRankSum=8.454;DP=634;FS=8.003;HRun=0;HaplotypeScore=148.1472;InbreedingCoeff=0.7405;MQ=69.39;MQ0=10;MQRankSum=-10.031;QD=11.89;ReadPosRankSum=1.020;VQSLOD=2.2586;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:62.79:0,63,1727	1/1:6,2:8:6.02:120,6,0	./.	0/0:26,0:17:0:0,0,0	0/0:22,0:22:36.11:0,36,1042	0/0:24,0:26:36.05:0,36,1016	0/0:31,0:31:27.09:0,27,747	./.	0/0:24,0:25:36.05:0,36,960	0/0:18,0:19:24.01:0,24,598	0/0:9,0:11:8.96:0,9,161	0/0:34,0:34:48.16:0,48,1444	0/0:28,0:28:24.08:0,24,743	0/0:16,0:27:36.12:0,36,903	1/1:10,11:21:27.09:533,27,0	0/0:12,0:27:39.04:0,39,824	0/0:23,0:23:33.11:0,33,869	0/1:8,4:12:7.65:168,0,8	1/1:11,0:14:9.65:94,10,0	1/1:19,0:28:15.05:209,15,0	1/1:18,0:26:3.01:42,3,0	1/1:5,0:14:9.03:126,9,0	1/1:7,0:17:14.60:180,15,0	./.	0/0:22,0:22:24.08:0,24,765	1/1:11,9:21:30.10:548,30,0	1/1:12,0:23:21.07:293,21,0	0/1:11,12:23:36.63:360,0,37
chr10	101267147	.	AGT	A	1304.67	PASS	AB=0.556;AC=5;AF=0.089;AN=56;BaseQRankSum=8.214;DP=599;FS=8.138;HRun=0;HaplotypeScore=73.3010;InbreedingCoeff=0.8343;MQ=68.20;MQ0=0;MQRankSum=-0.302;QD=23.72;ReadPosRankSum=2.201;VQSLOD=4.1855;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.23:0,87,1375	0/0:8,0:8:18.05:0,18,277	0/0:14,0:13:6.49:0,6,499	0/0:20,0:18:45.05:0,45,629	0/0:26,0:26:69.21:0,69,1103	0/0:21,0:21:57.18:0,57,932	0/0:27,0:27:60.19:0,60,976	0/0:17,0:17:27.09:0,27,432	0/0:20,0:20:45.10:0,45,701	0/0:28,0:28:69.20:0,69,1065	0/0:19,0:19:51.01:0,51,763	0/0:11,0:11:33.11:0,33,549	0/0:28,0:28:81.22:0,81,1253	0/0:24,0:24:63.20:0,63,1033	0/0:19,0:19:51.16:0,51,832	0/0:13,0:13:36.11:0,36,580	0/0:32,0:32:84.11:0,84,1321	0/0:25,0:25:66.12:0,66,949	0/0:20,0:20:50.78:0,51,728	0/0:27,0:27:69.22:0,69,1126	0/0:22,0:22:60.15:0,60,953	1/1:1,19:20:39.13:507,39,0	1/1:4,11:15:30.03:390,30,0	0/1:4,16:20:2.29:537,0,2	0/0:24,0:24:57.18:0,57,933	0/0:31,0:31:81.66:0,82,1187	0/0:24,1:25:52.31:0,52,1088	0/0:13,0:13:39.09:0,39,601
chr10	101267477	.	T	TAA	3821.10	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-7.624;DP=630;FS=7.676;HRun=9;HaplotypeScore=73.3759;InbreedingCoeff=0.9645;MQ=70.01;MQ0=0;MQRankSum=-1.780;QD=32.38;ReadPosRankSum=-0.037;VQSLOD=3.4263;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,16:23:44.63:637,45,0	0/0:11,0:11:27.06:0,27,287	0/0:13,0:12:11.33:0,11,155	0/0:11,0:9:5.50:0,6,112	0/0:36,0:37:90.14:0,90,1005	0/0:27,0:27:66.09:0,66,685	0/0:12,0:12:33.05:0,33,343	0/0:40,0:40:90.17:0,90,958	0/0:17,0:17:45.09:0,45,470	0/0:25,0:26:59.84:0,60,619	0/0:27,0:27:75.15:0,75,790	0/0:21,0:21:51.08:0,51,531	0/0:18,0:18:51.11:0,51,535	0/0:18,0:18:51.12:0,51,540	0/0:21,0:21:54.11:0,54,575	1/1:6,21:28:65.78:954,66,0	0/0:31,0:30:84.19:0,84,893	0/0:12,0:12:30.06:0,30,319	0/0:25,0:25:59.86:0,60,619	0/0:34,0:34:90.21:0,90,950	0/0:10,0:10:24.04:0,24,248	1/1:6,29:36:84.16:1213,84,0	1/1:1,15:17:47.65:701,48,0	1/1:4,8:14:26.02:314,26,0	0/0:34,0:33:93.20:0,93,990	0/0:20,0:20:51.12:0,51,543	0/0:31,0:31:83.90:0,84,874	0/0:14,0:14:39.10:0,39,415
chr10	101267752	.	TG	T	2856.65	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.153;DP=747;FS=7.410;HRun=2;HaplotypeScore=69.8882;InbreedingCoeff=0.9929;MQ=83.93;MQ0=0;MQRankSum=-1.337;QD=32.84;ReadPosRankSum=1.841;VQSLOD=3.5134;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1483	0/0:5,0:5:15.05:0,15,225	0/0:21,0:22:60.19:0,60,856	0/0:21,0:21:62.02:0,62,901	0/0:38,0:38:99:0,108,1580	0/0:28,0:28:84.27:0,84,1237	0/0:26,0:26:78.26:0,78,1169	0/0:26,0:26:72.23:0,72,1044	0/0:21,0:21:60.20:0,60,897	0/0:36,0:36:99:0,102,1495	0/0:14,0:14:42.14:0,42,629	0/0:24,0:24:69.23:0,69,1034	0/0:34,0:34:99:0,102,1529	0/0:30,0:30:90.28:0,90,1297	0/0:40,0:40:99:0,120,1761	0/0:30,0:30:90.30:0,90,1349	0/0:23,0:23:69.23:0,69,1034	0/0:20,0:20:57.19:0,57,854	0/0:19,0:19:51.12:0,51,721	0/0:28,0:28:81.26:0,81,1193	0/0:40,0:40:99:0,120,1798	1/1:1,41:42:99:1441,111,0	1/1:0,23:23:56.92:740,57,0	1/1:0,22:22:63.20:818,63,0	0/0:31,0:31:90.30:0,90,1348	0/0:25,0:25:75.25:0,75,1123	0/0:38,0:38:99:0,114,1688	0/0:7,0:7:21.06:0,21,295
chr10	101269710	.	C	CAAA	5156.13	PASS	AB=0.857;AC=31;AF=0.554;AN=56;BaseQRankSum=8.881;DP=533;FS=1.240;HRun=11;HaplotypeScore=91.8429;InbreedingCoeff=0.8023;MQ=72.55;MQ0=0;MQRankSum=-1.007;QD=17.72;ReadPosRankSum=-1.729;VQSLOD=3.0636;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:22:45.09:719,45,0	1/1:1,0:9:21.41:152,21,0	0/1:10,0:9:4.17:4,0,28	0/1:13,0:13:59.23:59,0,107	0/0:24,0:24:63.12:0,63,715	0/0:25,0:27:61.56:0,62,716	0/0:17,0:17:39.07:0,39,456	1/1:8,1:25:48.92:406,49,0	0/0:11,0:11:27.06:0,27,316	0/0:29,0:29:75.13:0,75,875	0/0:29,0:31:58.52:0,59,659	0/0:19,0:19:48.07:0,48,550	0/0:24,0:25:60.03:0,60,674	0/0:21,0:21:51.08:0,51,593	1/1:2,1:18:34.14:288,34,0	1/1:5,12:17:27.09:507,27,0	0/0:15,0:15:33.02:0,33,385	1/1:6,0:11:14.95:116,15,0	1/1:6,0:15:35.80:320,36,0	0/1:6,0:24:12.08:347,0,12	1/1:2,0:14:25.15:186,25,0	1/1:6,0:16:33.09:446,33,0	1/1:3,1:16:27.09:396,27,0	1/1:3,0:17:18.06:258,18,0	0/0:22,0:23:49.87:0,50,552	1/1:7,1:25:20.01:392,20,0	1/1:3,3:22:37.17:378,37,0	1/1:1,0:15:25.11:181,25,0
chr10	101270723	.	C	CT	50.53	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.606;DP=439;FS=4.605;HRun=11;HaplotypeScore=49.4502;InbreedingCoeff=0.5434;MQ=69.87;MQ0=1;MQRankSum=1.696;QD=10.11;ReadPosRankSum=-1.226;VQSLOD=2.1876;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:50.76:0,51,390	0/0:5,0:5:14.91:0,15,110	0/0:24,0:11:8.57:0,9,56	0/0:9,0:4:2.85:0,3,16	0/0:20,0:22:60.74:0,61,433	0/0:32,0:32:46.70:0,47,528	0/0:8,0:10:21.98:0,22,148	0/0:28,0:29:65.57:0,66,494	0/0:14,0:14:38.83:0,39,297	0/0:13,1:14:2.41:0,2,200	0/0:22,0:22:53.69:0,54,408	0/0:7,0:7:11.92:0,12,88	0/0:8,0:8:17.92:0,18,139	0/0:13,0:13:23.80:0,24,186	0/0:16,0:16:38.81:0,39,299	0/0:13,1:14:8.40:0,8,246	0/0:16,1:17:12.39:0,12,270	0/0:7,0:7:11.94:0,12,93	0/0:19,0:21:42.61:0,43,295	0/0:24,0:24:50.76:0,51,389	0/0:7,0:7:11.94:0,12,91	1/1:0,5:5:14.95:138,15,0	0/0:17,0:17:41.81:0,42,325	0/0:12,0:12:32.86:0,33,252	0/0:22,0:22:59.74:0,60,460	0/0:24,1:25:35.23:0,35,448	0/0:22,0:22:40.02:0,40,302	0/0:2,0:2:5.96:0,6,45
chr10	101270921	.	T	TTC	340.66	PASS	AB=1.000;AC=11;AF=0.212;AN=52;BaseQRankSum=-0.819;DP=490;FS=11.904;HRun=0;HaplotypeScore=107.4522;InbreedingCoeff=0.2760;MQ=48.09;MQ0=26;MQRankSum=-3.894;QD=2.58;ReadPosRankSum=-3.784;VQSLOD=0.2365;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,13:29:0.47:0,0,2	1/1:7,0:7:17.89:133,18,0	./.	./.	0/0:26,0:26:14.28:0,14,107	0/0:27,0:27:21.28:0,21,154	0/0:24,0:23:5.81:0,6,44	1/1:30,0:26:14.39:93,14,0	0/0:13,0:13:14.72:0,15,97	0/0:20,0:16:27.10:0,27,179	0/0:17,0:16:9.39:0,9,67	0/0:14,0:14:21.68:0,22,147	0/0:16,0:14:2.58:0,3,92	0/0:13,0:14:2.46:0,2,22	0/1:24,0:24:15.07:20,0,15	0/0:22,0:22:16.26:0,16,116	0/0:18,0:16:8.78:0,9,63	1/1:9,0:8:9.54:51,10,0	0/1:12,0:11:14.46:14,0,51	0/0:22,0:20:2.14:0,2,24	0/0:17,0:16:17.67:0,18,138	0/0:16,0:14:11.64:0,12,92	0/1:15,0:15:12.10:12,0,60	0/0:24,0:22:20.81:0,21,167	0/0:10,0:10:5.65:0,6,44	0/1:21,0:20:57.22:133,0,57	0/0:17,0:16:14.83:0,15,95	0/1:14,0:12:14.63:34,0,15
chr10	101270948	.	TCACA	T	312.77	PASS	AB=0.950;AC=12;AF=0.240;AN=50;BaseQRankSum=1.629;DP=466;FS=1.244;HRun=0;HaplotypeScore=128.3333;InbreedingCoeff=0.2529;MQ=43.39;MQ0=31;MQRankSum=-0.320;QD=2.46;ReadPosRankSum=-2.551;VQSLOD=1.9894;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:26:20.60:128,0,21	0/0:6,0:6:5.38:0,5,36	./.	./.	0/0:25,0:25:20.80:0,21,361	0/0:29,0:29:10.97:0,11,192	0/0:28,0:24:3.48:0,3,39	0/0:23,0:20:8.97:0,9,88	0/0:15,0:15:12.04:0,12,201	0/0:23,0:18:15.83:0,16,196	0/0:16,0:15:4.11:0,4,96	1/1:11,0:17:6.01:65,6,0	1/1:17,0:16:4.43:125,4,0	0/1:12,0:12:13.47:39,0,13	0/0:26,0:26:14.88:0,15,268	0/1:19,0:19:35.58:36,0,58	0/0:15,0:12:8.78:0,9,150	0/0:7,0:5:2.96:0,3,19	0/0:10,0:10:2.97:0,3,20	0/0:16,0:15:2.68:0,3,36	0/0:16,0:14:3.01:0,3,67	0/1:12,4:14:0:0,0,0	1/1:11,0:11:3.01:44,3,0	./.	0/0:11,0:10:5.60:0,6,94	0/0:21,0:20:36.02:0,36,472	0/0:23,0:21:20.65:0,21,337	1/1:5,0:4:0.47:1,0,0
chr10	101272663	.	G	GA	929.47	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.498;DP=482;FS=0.000;HRun=7;HaplotypeScore=54.7870;InbreedingCoeff=0.9245;MQ=69.69;MQ0=0;MQRankSum=0.119;QD=26.56;ReadPosRankSum=0.795;VQSLOD=4.1335;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:22:51.16:616,51,0	0/0:8,0:8:21.03:0,21,202	0/0:17,0:16:20.99:0,21,189	0/0:11,0:8:10.54:0,11,91	0/0:27,0:27:75.10:0,75,718	0/0:19,0:19:54.08:0,54,521	0/0:16,0:16:8.84:0,9,353	0/0:20,0:20:45.06:0,45,434	0/0:8,0:8:18.03:0,18,174	0/0:23,0:23:60.09:0,60,579	0/0:22,0:22:54.08:0,54,521	0/0:12,0:12:30.05:0,30,290	0/0:12,0:12:30.03:0,30,284	0/0:6,0:6:15.02:0,15,145	0/0:19,0:19:45.07:0,45,435	1/1:1,12:13:36.11:435,36,0	0/0:30,0:30:81.13:0,81,782	0/0:19,0:19:51.08:0,51,492	0/0:11,0:11:30.05:0,30,290	0/0:33,0:33:84.12:0,84,811	0/0:11,0:11:22.29:0,22,279	0/0:15,0:15:42.07:0,42,406	0/0:19,0:19:54.08:0,54,521	0/0:15,0:15:33.05:0,33,319	0/0:16,0:16:30.04:0,30,290	0/0:29,0:29:84.13:0,84,811	0/0:23,0:22:57.06:0,57,543	0/0:5,0:5:15.02:0,15,145
chr10	101272692	.	G	GAA	1358.71	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=1.547;DP=453;FS=3.311;HRun=7;HaplotypeScore=61.1776;InbreedingCoeff=0.8446;MQ=67.03;MQ0=0;MQRankSum=-0.834;QD=23.03;ReadPosRankSum=0.586;VQSLOD=2.0454;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.15:0,51,594	0/0:9,0:9:24.07:0,24,279	0/1:14,0:10:4.03:4,0,135	0/0:14,0:11:23.64:0,24,241	0/0:26,0:26:75.21:0,75,863	0/0:20,0:20:60.15:0,60,677	0/0:15,0:15:35.57:0,36,390	0/0:19,0:19:42.10:0,42,480	0/0:10,0:10:30.09:0,30,349	0/0:27,0:27:66.17:0,66,769	0/0:21,0:21:54.10:0,54,613	0/0:9,0:9:27.08:0,27,315	0/0:8,0:8:21.06:0,21,245	0/0:3,0:3:9.03:0,9,105	0/0:14,0:14:39.09:0,39,443	0/0:9,0:9:24.06:0,24,269	0/0:24,0:24:66.16:0,66,753	0/0:19,0:19:54.09:0,54,601	0/0:16,0:15:42.12:0,42,489	0/0:31,0:31:87.23:0,87,1002	0/0:11,0:11:18.04:0,18,210	1/1:2,9:12:27.09:442,27,0	1/1:5,19:24:54.14:857,54,0	1/1:2,5:8:12.04:197,12,0	0/0:16,0:16:42.09:0,42,470	0/0:30,0:30:81.22:0,81,934	0/0:15,0:15:45.13:0,45,524	0/0:9,0:9:27.08:0,27,315
chr10	101272782	.	A	AAC	2100.33	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.725;DP=541;FS=3.918;HRun=0;HaplotypeScore=79.9425;InbreedingCoeff=0.9760;MQ=64.08;MQ0=1;MQRankSum=0.545;QD=41.18;ReadPosRankSum=0.332;VQSLOD=5.4530;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:28:78.27:1294,78,0	0/0:9,0:9:24.08:0,24,309	0/0:22,0:18:35.60:0,36,420	0/0:12,0:10:12.04:0,12,154	0/0:22,0:22:54.16:0,54,671	0/0:19,0:19:48.13:0,48,592	0/0:21,0:21:54.17:0,54,694	0/0:28,0:28:72.22:0,72,913	0/0:13,0:13:36.11:0,36,451	0/0:23,0:23:60.19:0,60,759	0/0:19,0:19:48.11:0,48,589	0/0:16,0:16:48.16:0,48,617	0/0:20,0:20:60.19:0,60,772	0/0:8,0:8:24.08:0,24,309	0/0:18,0:18:51.15:0,51,642	1/1:7,16:23:57.18:928,57,0	0/0:15,0:15:39.10:0,39,484	0/0:26,0:26:66.21:0,66,833	0/0:18,0:18:42.12:0,42,516	0/0:23,0:23:57.18:0,57,733	0/0:8,0:8:18.06:0,18,232	0/0:14,0:14:36.12:0,36,463	0/0:22,0:22:63.20:0,63,810	0/0:26,0:26:69.19:0,69,869	0/0:24,0:24:69.19:0,69,859	0/0:32,0:32:84.27:0,84,1081	0/0:23,0:23:63.20:0,63,810	0/0:9,0:9:21.06:0,21,256
chr10	101272866	.	A	AG	3582.82	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-9.448;DP=589;FS=0.424;HRun=6;HaplotypeScore=61.7374;InbreedingCoeff=0.9978;MQ=70.22;MQ0=0;MQRankSum=-0.444;QD=30.62;ReadPosRankSum=2.446;VQSLOD=4.2779;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,35:38:87.28:1094,87,0	0/0:8,0:8:18.04:0,18,184	0/0:24,0:24:65.50:0,65,644	0/0:19,0:17:37.38:0,37,325	0/0:25,0:25:75.17:0,75,765	0/0:30,0:30:84.19:0,84,857	0/0:18,0:18:51.12:0,51,520	0/0:26,0:26:42.08:0,42,429	0/0:17,0:17:51.11:0,51,520	0/0:22,0:22:57.12:0,57,581	0/0:13,0:13:39.09:0,39,398	0/0:27,0:27:72.11:0,72,714	0/0:20,0:20:54.08:0,54,540	0/0:17,0:17:48.11:0,48,490	0/0:14,0:14:42.08:0,42,421	1/1:2,19:21:54.17:678,54,0	0/0:18,0:18:53.88:0,54,524	0/0:21,0:21:63.10:0,63,632	0/0:17,0:17:48.09:0,48,482	0/0:25,0:25:66.15:0,66,670	0/0:25,0:25:75.17:0,75,765	1/1:0,13:13:36.12:452,36,0	1/1:3,11:14:27.09:340,27,0	1/1:2,29:31:81.26:1019,81,0	0/0:24,0:24:69.13:0,69,695	0/0:27,0:27:66.13:0,66,667	0/0:16,0:16:45.10:0,45,459	0/0:17,0:17:51.08:0,51,505
chr10	101274494	.	T	TTGTGTGTG	3098.78	PASS	AB=0.946;AC=29;AF=0.518;AN=56;BaseQRankSum=8.268;DP=623;FS=2.026;HRun=0;HaplotypeScore=178.8918;InbreedingCoeff=0.8350;MQ=58.11;MQ0=2;MQRankSum=-5.023;QD=9.87;ReadPosRankSum=-5.227;VQSLOD=1.1085;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,2:35:16.35:498,0,16	1/1:7,0:7:6.47:56,6,0	0/0:26,0:13:5:0,5,57	0/0:36,0:22:10.27:0,10,453	0/0:18,0:18:53.90:0,54,1062	0/0:21,0:21:42.07:0,42,818	0/0:24,0:24:56.62:0,57,1173	1/1:37,0:37:45.94:600,46,0	0/0:26,0:26:63.16:0,63,1305	0/0:23,0:23:63.20:0,63,1223	0/0:18,0:18:33.11:0,33,759	0/0:22,0:22:52.03:0,52,980	0/0:26,0:26:66.21:0,66,1496	0/0:24,0:24:60.12:0,60,1210	1/1:21,0:21:11.30:134,11,0	1/1:19,2:22:21.51:487,22,0	0/0:27,0:28:39.07:0,39,778	1/1:9,0:9:11.30:80,11,0	1/1:24,0:21:23.50:145,23,0	1/1:27,0:27:15.01:160,15,0	1/1:20,0:19:16.91:214,17,0	1/1:17,0:17:6.02:135,6,0	1/1:14,0:14:8.98:73,9,0	1/1:36,0:34:10.46:197,10,0	0/0:17,0:17:39.07:0,39,670	1/1:15,0:15:23.89:292,24,0	1/1:20,0:19:9.20:154,9,0	1/1:10,0:10:8.81:90,9,0
chr10	101277185	.	CTG	C	10986.88	PASS	AB=0.526;AC=25;AF=0.446;AN=56;BaseQRankSum=15.956;DP=612;FS=9.742;HRun=0;HaplotypeScore=75.4639;InbreedingCoeff=0.9233;MQ=73.59;MQ0=0;MQRankSum=-0.640;QD=44.30;ReadPosRankSum=2.738;VQSLOD=6.3040;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,2390	1/1:0,11:11:33.11:538,33,0	0/0:11,0:11:13.32:0,13,442	0/0:12,0:12:30.10:0,30,571	0/0:26,0:26:78.27:0,78,1572	0/0:27,0:27:81.28:0,81,1635	0/0:16,0:16:45.13:0,45,849	1/1:0,37:37:99:1642,105,0	0/0:16,0:16:48.16:0,48,975	0/0:24,0:24:72.25:0,72,1442	0/0:28,0:28:84.27:0,84,1655	0/0:21,0:21:63.19:0,63,1183	0/0:29,0:29:87.28:0,87,1680	0/0:30,0:30:90.29:0,90,1754	1/1:0,21:21:57.19:929,57,0	0/0:33,0:33:99:0,99,1952	0/0:25,0:25:75.26:0,75,1497	1/1:0,13:13:36.12:587,36,0	1/1:0,19:19:57.17:899,57,0	1/1:0,15:14:39.10:608,39,0	1/1:0,13:13:33.11:538,33,0	1/1:0,18:18:51.17:832,51,0	1/1:0,28:28:75.26:1223,75,0	1/1:0,19:19:51.17:832,51,0	0/0:26,0:26:78.25:0,78,1470	0/1:2,18:20:49.49:795,0,49	1/1:0,26:26:78.27:1270,78,0	1/1:0,8:8:18.06:294,18,0
chr10	101279804	.	TC	T	1815.94	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.780;DP=768;FS=0.513;HRun=4;HaplotypeScore=71.3144;InbreedingCoeff=0.9995;MQ=82.41;MQ0=0;MQRankSum=-4.413;QD=25.22;ReadPosRankSum=2.097;VQSLOD=2.4638;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:69.21:828,69,0	0/0:10,0:10:30.10:0,30,419	0/0:22,0:22:60.18:0,60,801	0/0:19,0:19:48.13:0,48,634	0/0:28,0:28:72.24:0,72,1006	0/0:30,0:30:90.30:0,90,1259	0/0:31,0:31:90.27:0,90,1223	0/0:39,0:39:99:0,108,1497	0/0:23,0:23:69.23:0,69,966	0/0:35,0:36:99:0,108,1467	0/0:26,0:26:78.13:0,78,1064	0/0:29,0:29:81.26:0,81,1116	0/0:35,0:35:99:0,102,1390	0/0:31,0:31:90.26:0,90,1236	0/0:50,0:50:99:0,151,2100	1/1:2,38:40:57.32:1110,57,0	0/0:27,0:27:75.24:0,75,1031	0/0:16,0:16:45.15:0,45,629	0/0:34,0:34:93.28:0,93,1248	0/0:20,0:20:55.06:0,55,741	0/0:31,0:31:84.28:0,84,1171	0/0:27,0:27:81.27:0,81,1133	0/0:21,0:21:63.21:0,63,881	0/0:18,0:18:54.18:0,54,755	0/0:23,0:23:69.20:0,69,918	0/0:23,0:23:69.23:0,69,965	0/0:37,0:37:99:0,108,1469	0/0:10,0:10:30.09:0,30,407
chr10	101280553	.	TTTTTGTTTTTGTTTTTG	T	1528.67	PASS	AB=0.600;AC=3;AF=0.054;AN=56;BaseQRankSum=5.006;DP=720;FS=16.403;HRun=0;HaplotypeScore=382.8166;InbreedingCoeff=0.5274;MQ=59.24;MQ0=7;MQRankSum=-3.560;QD=52.71;ReadPosRankSum=0.222;VQSLOD=1.7486;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,6:14:5.04:512,5,0	0/0:14,0:13:39.04:0,39,2007	0/0:27,0:20:55.13:0,55,2184	0/0:23,0:17:44.31:0,44,1390	0/0:35,0:34:99:0,99,6539	0/0:24,0:24:72.24:0,72,4791	0/0:22,0:22:66.23:0,66,3893	0/0:36,0:34:92.34:0,92,3072	0/0:22,0:22:60.20:0,60,3626	0/0:34,0:34:99:0,99,7017	0/0:28,0:27:81.28:0,81,5351	0/0:22,0:22:66.23:0,66,4201	0/0:33,0:33:99:0,99,6221	0/0:29,0:29:81.27:0,81,5552	0/0:36,0:35:99:0,99,4966	0/1:5,10:15:50.20:1111,0,50	0/0:37,0:37:99:0,108,7281	0/0:28,0:28:67.08:0,67,3113	0/0:24,0:24:69.20:0,69,2382	0/0:29,0:29:84.28:0,84,3821	0/0:26,0:26:78.07:0,78,2822	0/0:27,0:27:72.09:0,72,3462	0/0:27,0:27:75.19:0,75,4014	0/0:20,0:20:57.12:0,57,2386	0/0:25,0:25:75.26:0,75,4831	0/0:25,0:24:69.09:0,69,3305	0/0:30,0:29:69.43:0,69,3992	0/0:8,0:8:24.03:0,24,861
chr10	101280555	.	T	TTTG	8810.66	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=14.282;DP=738;FS=1.023;HRun=0;HaplotypeScore=171.1835;InbreedingCoeff=0.6163;MQ=58.89;MQ0=7;MQRankSum=-6.162;QD=23.43;ReadPosRankSum=2.000;VQSLOD=5.0700;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:72.44:72,0,106	1/1:14,0:13:32.55:567,33,0	0/0:27,0:21:42.58:0,43,557	0/0:23,0:17:29.46:0,29,395	0/0:36,0:35:99:0,99,1466	0/0:25,0:25:69.21:0,69,1050	0/0:23,0:23:63.18:0,63,951	1/1:35,0:33:51.78:659,52,0	0/0:23,0:23:60.13:0,60,858	0/0:33,0:33:96.32:0,96,1505	0/0:28,0:27:81.24:0,81,1181	0/0:23,0:23:69.19:0,69,986	0/0:33,0:33:93.28:0,93,1409	0/0:27,0:27:78.26:0,78,1215	1/1:36,0:35:81.26:1470,81,0	0/1:20,0:20:21.67:22,0,136	0/0:36,0:36:99:0,102,1595	1/1:27,0:27:44.72:739,45,0	1/1:24,0:24:4.02:406,4,0	1/1:30,0:30:32.79:872,33,0	1/1:27,0:27:40.18:703,40,0	0/1:26,0:26:35.16:408,0,35	0/1:26,0:26:78.81:351,0,79	0/1:20,0:20:33.19:219,0,33	0/0:25,0:25:75.22:0,75,1090	1/1:25,0:24:53.14:938,53,0	1/1:22,9:32:54.94:1120,55,0	1/1:8,0:8:17.50:263,17,0
chr10	101280560	.	T	TG	2339.13	PASS	AB=0.722;AC=13;AF=0.232;AN=56;BaseQRankSum=16.003;DP=719;FS=4.424;HRun=0;HaplotypeScore=148.9849;InbreedingCoeff=-0.1811;MQ=57.58;MQ0=7;MQRankSum=-3.355;QD=7.22;ReadPosRankSum=8.519;VQSLOD=2.7415;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:8.89:0,9,403	0/1:6,8:13:1.06:197,0,1	0/0:23,0:17:48.09:0,48,611	0/0:19,0:14:36.54:0,37,464	0/0:34,0:33:99:0,99,1367	0/0:24,0:24:69.23:0,69,964	0/0:23,0:23:66.17:0,66,884	0/1:32,2:32:15.75:16,0,123	0/0:21,0:21:63.15:0,63,842	0/0:34,0:34:99:0,99,1360	0/0:31,0:30:90.29:0,90,1240	0/0:24,0:24:69.21:0,69,933	0/0:33,0:33:99:0,99,1367	0/0:29,0:29:84.26:0,84,1144	0/1:14,20:33:3.76:469,0,4	0/0:16,0:16:11.94:0,12,276	0/0:37,0:37:99:0,108,1491	0/1:13,13:26:33.69:249,0,34	0/1:16,6:22:99:114,0,201	0/1:16,12:28:88.25:198,0,88	0/1:17,9:26:99:210,0,112	0/1:16,10:26:99:133,0,132	0/1:16,9:25:99:114,0,183	0/1:16,6:22:40.33:40,0,174	0/0:27,0:27:78.23:0,78,1020	0/1:10,14:23:15.83:322,0,16	0/1:18,17:34:37.10:358,0,37	0/1:5,3:8:16:74,0,16
chr10	101280561	.	T	TTG	4083.15	PASS	AB=0.778;AC=17;AF=0.304;AN=56;BaseQRankSum=17.184;DP=720;FS=5.011;HRun=0;HaplotypeScore=159.2830;InbreedingCoeff=-0.1189;MQ=57.62;MQ0=7;MQRankSum=-4.955;QD=11.28;ReadPosRankSum=8.118;VQSLOD=2.6423;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:99:103,0,424	1/1:6,8:13:6.04:279,6,0	0/0:23,0:17:42.14:0,42,618	0/0:18,0:14:33.47:0,33,438	0/0:33,0:32:96.33:0,96,1469	0/0:24,0:24:72.23:0,72,1075	0/0:24,0:24:66.20:0,66,956	0/1:32,2:32:99:126,0,108	0/0:21,0:21:60.19:0,60,896	0/0:35,0:35:99:0,99,1489	0/0:32,0:31:90.30:0,90,1346	0/0:24,0:24:69.20:0,69,1007	0/0:33,0:33:96.33:0,96,1461	0/0:29,0:29:87.27:0,87,1261	1/1:15,20:34:23.72:751,24,0	0/1:16,0:16:62.83:63,0,325	0/0:36,0:36:99:0,108,1616	0/1:13,12:26:38.99:360,0,39	0/1:16,6:22:99:195,0,236	0/1:17,12:29:99:357,0,120	0/1:16,9:25:99:294,0,110	0/1:16,0:26:99:183,0,187	0/1:16,1:25:99:182,0,271	0/1:16,0:22:90.32:90,0,214	0/0:26,0:26:75.21:0,75,1055	0/1:10,14:23:20.74:447,0,21	0/1:18,17:34:18.29:556,0,18	0/1:5,3:8:20.08:97,0,20
chr10	101281690	.	GTT	G	687.52	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.471;DP=777;FS=9.088;HRun=3;HaplotypeScore=161.5196;InbreedingCoeff=0.9839;MQ=60.05;MQ0=14;MQRankSum=-2.674;QD=13.22;ReadPosRankSum=2.725;VQSLOD=0.0642;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,33:38:25.16:532,25,0	0/0:7,0:7:21.04:0,21,360	0/0:52,1:22:59.39:0,59,818	0/0:60,2:34:70.37:0,70,1285	0/0:23,0:23:66.23:0,66,1275	0/0:24,0:24:72.19:0,72,1320	0/0:23,2:24:63.13:0,63,1117	0/0:52,0:47:99:0,138,2364	0/0:24,0:24:72.20:0,72,1300	0/0:30,0:30:84.33:0,84,1430	0/0:17,0:17:51.17:0,51,971	0/0:31,0:31:93.28:0,93,1744	0/0:25,0:25:75.25:0,75,1401	0/0:36,0:36:99:0,108,1982	0/0:23,0:23:64.48:0,64,925	1/1:0,14:14:18.06:275,18,0	0/0:34,0:33:98.42:0,98,1792	0/0:19,0:19:27.42:0,27,706	0/0:19,0:15:45.12:0,45,764	0/0:29,0:29:85.30:0,85,1364	0/0:35,0:34:84.58:0,85,1350	0/0:28,0:28:80.78:0,81,1140	0/0:20,0:20:48.79:0,49,703	0/0:27,0:27:27.84:0,28,393	0/0:23,0:23:63.97:0,64,1132	0/0:32,0:32:94.53:0,95,1594	0/0:22,0:22:61.34:0,61,800	0/0:5,0:5:15.05:0,15,270
chr10	101281700	.	CTGTCTCTG	C	5270.03	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=6.371;DP=742;FS=17.621;HRun=0;HaplotypeScore=211.1071;InbreedingCoeff=0.8365;MQ=57.40;MQ0=14;MQRankSum=0.199;QD=14.24;ReadPosRankSum=-0.958;VQSLOD=2.3385;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:39:26.42:98,0,26	1/1:5,2:7:6.02:88,6,0	0/0:50,0:25:28.99:0,29,498	0/0:64,0:33:38.97:0,39,646	0/0:23,0:23:36.06:0,36,850	0/0:24,0:24:36.09:0,36,1080	0/0:24,0:23:48.13:0,48,1182	1/1:30,20:45:57.07:701,57,0	0/0:21,0:21:42.14:0,42,1362	1/1:12,12:24:36.07:641,36,0	0/0:17,0:17:30.07:0,30,750	0/0:30,0:30:66.14:0,66,1809	0/0:24,0:24:45.12:0,45,1112	0/0:32,0:32:75.20:0,75,2129	1/1:14,6:20:12.03:224,12,0	1/1:10,0:10:2.97:20,3,0	0/0:37,0:36:56.57:0,57,1909	1/1:17,1:18:12.18:444,12,0	1/1:15,1:12:17.96:220,18,0	1/1:23,5:27:23.97:316,24,0	1/1:30,4:33:26.70:320,27,0	1/1:16,9:25:18.03:257,18,0	1/1:8,12:20:6.02:73,6,0	1/1:6,23:29:3.01:37,3,0	0/0:26,0:26:45.13:0,45,1261	1/1:22,3:25:39.11:845,39,0	1/1:11,8:19:39.07:840,39,0	1/1:6,0:6:11.99:146,12,0
chr10	101281758	.	CTCTCTGTGTG	C	5611.85	PASS	AB=0.846;AC=18;AF=0.333;AN=54;BaseQRankSum=8.408;DP=695;FS=0.921;HRun=0;HaplotypeScore=231.2555;InbreedingCoeff=0.4529;MQ=47.45;MQ0=20;MQRankSum=-5.946;QD=19.15;ReadPosRankSum=0.345;VQSLOD=3.9602;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:30:15.52:0,16,399	1/1:2,10:15:20.73:550,21,0	0/0:23,0:2:2.98:0,3,22	0/0:21,0:2:3.01:0,3,59	0/0:21,0:20:42.13:0,42,1293	0/0:19,0:18:36.12:0,36,1085	0/0:37,0:33:51.89:0,52,1186	0/1:25,0:19:22.69:467,0,23	0/0:23,0:23:56.24:0,56,1733	0/0:14,0:14:35.93:0,36,846	0/0:21,0:21:45.15:0,45,1344	0/0:26,0:26:69.22:0,69,2242	0/0:24,0:24:63.20:0,63,2245	0/0:36,0:36:84.26:0,84,2425	1/1:6,16:22:6.02:173,6,0	0/0:21,0:20:9.43:0,9,682	0/0:33,0:32:44.70:0,45,2235	0/1:16,1:16:21.18:285,0,21	1/1:3,18:20:54.12:1148,54,0	0/1:8,30:38:19.06:81,0,19	1/1:8,32:38:5.76:99,6,0	./.	0/1:22,0:22:19.39:31,0,19	0/1:24,0:23:1.21:37,0,1	0/0:25,0:25:66.23:0,66,2081	1/1:5,29:34:60.93:1855,61,0	1/1:11,14:25:30.50:695,31,0	0/1:2,6:8:15.21:191,0,15
chr10	101281760	.	CTCTGTGTG	C	3789.90	PASS	AB=1.000;AC=22;AF=0.407;AN=54;BaseQRankSum=10.563;DP=698;FS=4.043;HRun=0;HaplotypeScore=220.6466;InbreedingCoeff=0.6893;MQ=46.52;MQ0=22;MQRankSum=-5.970;QD=13.21;ReadPosRankSum=0.314;VQSLOD=2.7910;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:34:19.41:0,19,426	1/1:14,0:14:20.87:382,21,0	0/0:23,0:1:2.96:0,3,19	0/0:20,0:2:3:0,3,28	0/0:20,0:19:39.05:0,39,948	0/0:20,0:19:39.05:0,39,844	0/0:36,0:32:49.23:0,49,833	0/1:25,0:19:20.49:249,0,20	0/0:26,0:26:58.62:0,59,1408	0/0:16,0:16:24.84:0,25,782	0/0:21,0:21:45.07:0,45,1016	0/0:26,0:26:66.13:0,66,1741	0/0:24,0:24:60.16:0,60,1749	0/0:37,0:37:84.07:0,84,1890	1/1:22,0:22:6.02:97,6,0	0/0:23,0:22:31.66:0,32,737	0/0:32,0:31:55.85:0,56,1673	0/1:16,0:15:9.03:156,0,9	1/1:21,0:20:49.11:699,49,0	1/1:36,0:38:0.76:46,1,0	1/1:39,0:36:5.74:79,6,0	./.	1/1:18,3:21:8.43:130,8,0	1/1:20,2:23:4.81:131,5,0	0/0:24,0:24:66.13:0,66,1639	1/1:34,0:34:71.20:1279,71,0	1/1:24,0:23:30.34:414,30,0	1/1:9,0:8:6:127,6,0
chr10	101281762	.	CTG	C	851.35	PASS	AB=0.957;AC=29;AF=0.580;AN=50;BaseQRankSum=9.201;DP=706;FS=5.095;HRun=0;HaplotypeScore=185.2819;InbreedingCoeff=0.3479;MQ=46.42;MQ0=22;MQRankSum=-2.581;QD=1.94;ReadPosRankSum=0.946;VQSLOD=2.2957;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:39:20.80:0,21,161	1/1:15,0:15:20.14:124,20,0	./.	./.	0/1:16,3:18:14.91:15,0,185	0/0:20,0:19:14.94:0,15,194	0/1:38,0:34:7.91:8,0,137	0/1:26,0:20:22.42:23,0,22	0/1:24,2:26:5.94:6,0,254	0/1:19,0:19:2.36:2,0,189	0/1:21,0:21:0.32:0,0,221	0/0:24,2:26:2.84:0,3,318	0/0:26,0:26:13.81:0,14,405	0/0:38,0:38:15.58:0,16,394	1/1:22,0:22:5.53:28,6,0	0/0:23,0:22:9.21:0,9,218	0/1:27,3:29:85.87:86,0,249	1/1:10,1:14:5.78:32,6,0	1/1:21,0:20:26.11:153,26,0	1/1:38,0:38:5.91:38,6,0	1/1:39,0:36:2.63:14,3,0	./.	1/1:21,0:21:5.56:35,6,0	1/1:24,0:23:2.40:23,2,0	0/0:25,0:25:35.80:0,36,379	1/1:33,0:34:50.93:286,51,0	1/1:24,0:23:17.52:118,18,0	1/1:7,0:6:5.68:28,6,0
chr10	101282576	.	CA	C	1630.62	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.675;DP=543;FS=0.000;HRun=2;HaplotypeScore=50.3416;InbreedingCoeff=0.9984;MQ=78.93;MQ0=0;MQRankSum=-1.854;QD=33.97;ReadPosRankSum=-0.108;VQSLOD=3.3039;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:72.23:934,72,0	0/0:12,0:12:36.12:0,36,540	0/0:9,0:9:27.09:0,27,392	0/0:16,0:16:38.30:0,38,550	0/0:28,0:28:84.28:0,84,1258	0/0:16,0:16:48.11:0,48,656	0/0:10,0:10:30.08:0,30,429	0/0:17,0:17:51.17:0,51,764	0/0:10,0:10:30.09:0,30,431	0/0:26,0:26:75.24:0,75,1090	0/0:38,0:38:99:0,114,1662	0/0:23,0:23:63.18:0,63,918	0/0:29,0:29:87.28:0,87,1282	0/0:12,0:12:36.12:0,36,539	0/0:15,0:15:45.14:0,45,638	1/1:1,22:23:63.20:818,63,0	0/0:20,0:20:60.18:0,60,860	0/0:17,0:17:48.14:0,48,697	0/0:16,0:16:48.15:0,48,701	0/0:24,0:24:69.23:0,69,1014	0/0:11,0:11:33.10:0,33,475	0/0:22,0:22:66.20:0,66,949	0/0:24,0:24:72.24:0,72,1079	0/0:18,0:18:51.16:0,51,742	0/0:21,0:21:63.20:0,63,925	0/0:24,0:24:72.23:0,72,1044	0/0:27,0:27:81.24:0,81,1167	0/0:10,0:10:30.10:0,30,450
chr10	101283197	.	T	TG	2289.63	PASS	AB=0.944;AC=6;AF=0.107;AN=56;BaseQRankSum=-1.822;DP=758;FS=1.086;HRun=1;HaplotypeScore=65.3688;InbreedingCoeff=0.6316;MQ=55.40;MQ0=107;MQRankSum=-4.060;QD=19.40;ReadPosRankSum=-0.275;VQSLOD=3.6554;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,28:30:78.22:1142,78,0	0/0:19,0:12:33.11:0,33,428	0/0:32,2:17:0.26:0,0,471	0/1:25,2:13:8.82:9,0,375	0/0:35,0:30:75.24:0,75,973	0/0:31,0:22:48.15:0,48,623	0/1:21,1:17:1.28:1,0,464	0/0:27,0:20:57.19:0,57,740	0/0:22,0:14:36.12:0,36,467	0/0:28,0:23:66.21:0,66,857	0/0:19,0:16:45.15:0,45,584	0/0:21,0:19:51.17:0,51,661	0/0:30,0:27:69.22:0,69,895	0/0:27,0:21:54.18:0,54,701	0/0:32,0:27:66.20:0,66,842	1/1:2,31:32:51.68:1264,52,0	0/0:23,0:19:54.18:0,54,701	0/0:18,1:11:27.09:0,27,350	0/0:18,0:14:33.11:0,33,428	0/0:43,0:32:81.26:0,81,1051	0/0:22,0:11:27.09:0,27,351	0/0:24,0:20:48.16:0,48,622	0/0:33,0:28:78.25:0,78,1011	0/0:29,0:27:63.20:0,63,817	0/0:31,0:24:60.20:0,60,779	0/0:30,0:20:60.18:0,60,766	0/0:30,0:26:69.22:0,69,895	0/0:13,0:6:18.06:0,18,234
chr10	101284995	.	TA	T	1795.84	PASS	AB=0.615;AC=28;AF=0.500;AN=56;BaseQRankSum=8.251;DP=280;FS=4.642;HRun=11;HaplotypeScore=33.0249;InbreedingCoeff=0.7160;MQ=47.42;MQ0=44;MQRankSum=-2.049;QD=13.11;ReadPosRankSum=0.952;VQSLOD=2.7196;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,3:4:5.98:49,6,0	1/1:1,5:5:14.98:123,15,0	0/0:9,1:2:2.05:0,2,24	0/0:13,0:2:0.88:0,1,2	0/0:16,0:12:30.02:0,30,299	0/0:12,0:10:24.06:0,24,256	0/0:10,0:6:15.04:0,15,160	1/1:9,11:17:0.93:211,1,0	0/0:7,0:3:9.02:0,9,96	0/0:6,0:6:9.02:0,9,96	0/0:8,0:8:18.04:0,18,189	0/0:7,0:5:15.04:0,15,160	0/0:12,0:10:27.06:0,27,282	0/0:5,0:3:6.02:0,6,64	1/1:0,6:5:14.98:123,15,0	1/1:2,2:2:5.99:49,6,0	0/0:19,1:19:23.44:0,23,441	1/1:1,8:7:17.98:147,18,0	1/1:3,8:9:5.04:174,5,0	1/1:2,7:7:14.98:123,15,0	1/1:4,4:4:11.99:99,12,0	1/1:0,6:6:17.98:147,18,0	1/1:3,7:8:23.90:189,24,0	0/1:6,6:8:1.68:105,0,2	0/0:15,0:15:36.06:0,36,370	0/1:2,7:9:7.58:148,0,8	1/1:1,8:9:23.01:178,23,0	1/1:3,5:6:17.02:129,17,0
chr10	101285053	.	GT	G	947.36	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.210;DP=434;FS=0.984;HRun=3;HaplotypeScore=53.9620;InbreedingCoeff=0.9946;MQ=84.18;MQ0=0;MQRankSum=-4.425;QD=27.86;ReadPosRankSum=-0.073;VQSLOD=2.7674;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:45.14:555,45,0	0/0:8,0:8:24.08:0,24,346	0/0:21,0:20:53.74:0,54,689	0/0:13,0:11:22.89:0,23,305	0/0:10,0:10:30.10:0,30,432	0/0:13,0:13:36.11:0,36,501	0/0:14,0:14:39.13:0,39,562	0/0:32,0:32:84.18:0,84,1186	0/0:8,0:8:24.07:0,24,329	0/0:15,0:15:45.15:0,45,634	0/0:12,0:12:36.12:0,36,518	0/0:11,0:11:33.10:0,33,457	0/0:16,0:16:39.60:0,40,560	0/0:19,0:19:57.19:0,57,809	0/0:13,0:13:39.13:0,39,561	1/1:0,17:17:42.13:514,42,0	0/0:18,0:18:48.15:0,48,674	0/0:14,0:14:39.13:0,39,562	0/0:21,0:21:60.19:0,60,846	0/0:16,0:16:48.16:0,48,691	0/0:15,0:15:39.12:0,39,543	0/0:15,0:15:45.14:0,45,630	0/0:14,0:14:42.14:0,42,605	0/0:13,0:13:33.11:0,33,475	0/0:25,0:25:72.24:0,72,1035	0/0:17,0:17:51.16:0,51,718	0/0:19,0:19:54.18:0,54,777	0/0:8,0:8:24.07:0,24,327
chr10	101285151	.	TTCTCTCTC	T	2227.38	PASS	AB=0.974;AC=19;AF=0.352;AN=54;BaseQRankSum=4.427;DP=496;FS=0.859;HRun=0;HaplotypeScore=144.0400;InbreedingCoeff=0.6166;MQ=72.36;MQ0=13;MQRankSum=-4.006;QD=10.26;ReadPosRankSum=-0.556;VQSLOD=2.5100;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:4.17:0,4,103	1/1:3,0:3:3.01:66,3,0	0/0:29,0:20:3.86:0,4,23	0/1:47,0:23:1.94:2,0,83	0/1:11,1:12:47.60:48,0,379	0/0:11,0:11:12.04:0,12,430	0/0:17,0:17:21.04:0,21,447	0/1:19,0:19:51.83:65,0,52	0/0:17,0:17:30.10:0,30,898	0/0:14,0:14:33.11:0,33,936	0/0:4,0:4:9.01:0,9,270	0/0:16,0:17:24.07:0,24,700	0/0:21,0:21:33.06:0,33,902	0/0:11,0:11:24.08:0,24,750	1/1:9,7:16:6.02:127,6,0	0/0:20,0:20:5.93:0,6,39	0/0:20,0:24:51.17:0,51,1484	1/1:11,0:10:6.02:114,6,0	1/1:13,7:22:23.84:456,24,0	1/1:6,7:13:17.42:293,17,0	1/1:26,0:26:8.55:67,9,0	0/0:8,0:7:12.02:0,12,247	0/0:12,0:12:6.02:0,6,140	0/0:30,0:33:45.11:0,45,1273	0/0:8,0:12:21.06:0,21,532	1/1:13,11:25:25.22:594,25,0	1/1:6,12:23:29.99:580,30,0	./.
chr10	101285194	.	TTG	T	907.09	PASS	AB=0.767;AC=4;AF=0.071;AN=56;BaseQRankSum=7.618;DP=524;FS=4.041;HRun=0;HaplotypeScore=101.8744;InbreedingCoeff=-0.0945;MQ=54.65;MQ0=15;MQRankSum=-2.228;QD=9.26;ReadPosRankSum=-1.857;VQSLOD=2.7831;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:21,8:29:46.89:319,0,47	0/0:1,0:1:3.01:0,3,50	0/0:24,0:9:26.94:0,27,461	0/0:38,1:18:13.77:0,14,605	0/0:9,0:9:24.08:0,24,469	0/0:12,0:12:36.04:0,36,653	0/0:19,0:19:48.15:0,48,971	0/0:30,0:30:78.26:0,78,1417	0/0:17,0:17:40.34:0,40,753	0/0:12,0:12:36.12:0,36,729	0/0:7,0:7:21.07:0,21,402	0/0:17,0:18:45.89:0,46,856	0/0:20,0:20:54.19:0,54,1086	0/0:19,0:19:54.19:0,54,1088	0/0:23,0:23:57.19:0,57,1098	0/1:4,28:32:49.54:467,0,50	0/0:19,0:20:57.03:0,57,1075	0/0:13,0:13:36.08:0,36,662	0/0:22,0:22:61.04:0,61,933	0/0:11,0:11:25.28:0,25,415	0/0:27,0:27:54.12:0,54,1022	0/1:3,2:5:36.45:36,0,145	0/0:9,0:9:3.04:0,3,452	0/1:31,0:31:99:193,0,722	0/0:15,0:15:45.15:0,45,854	0/0:21,0:21:57.17:0,57,902	0/0:35,0:33:73.46:0,73,1194	0/0:3,0:3:9.03:0,9,182
chr10	101285438	.	G	GT	1496.67	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.866;DP=578;FS=0.000;HRun=5;HaplotypeScore=53.1740;InbreedingCoeff=0.9893;MQ=75.52;MQ0=0;MQRankSum=-1.456;QD=34.81;ReadPosRankSum=2.173;VQSLOD=3.7615;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:63.20:829,63,0	0/0:11,0:11:30.08:0,30,322	0/0:9,0:9:21.05:0,21,225	0/0:15,0:15:36.09:0,36,385	0/0:29,0:29:78.19:0,78,838	0/0:22,0:22:63.16:0,63,677	0/0:24,0:24:69.17:0,69,742	0/0:35,0:35:99:0,99,1050	0/0:16,0:16:42.11:0,42,451	0/0:28,0:28:78.20:0,78,838	0/0:16,0:16:42.10:0,42,451	0/0:18,0:18:42.10:0,42,451	0/0:22,0:22:66.15:0,66,700	0/0:14,0:14:42.11:0,42,451	0/0:27,0:27:78.19:0,78,838	1/1:0,20:20:60.20:790,60,0	0/0:19,0:19:57.14:0,57,613	0/0:15,0:15:42.05:0,42,429	0/0:23,0:23:48.19:0,48,595	0/0:37,0:37:99:0,102,1088	0/0:13,0:13:36.09:0,36,387	0/0:19,0:19:51.12:0,51,540	0/0:28,0:28:78.15:0,78,818	0/0:16,0:16:48.12:0,48,515	0/0:17,0:17:48.12:0,48,516	0/0:28,0:28:78.16:0,78,826	0/0:29,0:28:84.21:0,84,903	0/0:5,0:5:15.01:0,15,151
chr10	101286930	.	A	AGT	333.44	PASS	AB=0.933;AC=15;AF=0.300;AN=50;BaseQRankSum=-2.815;DP=546;FS=2.670;HRun=0;HaplotypeScore=91.7235;InbreedingCoeff=-0.0013;MQ=72.00;MQ0=23;MQRankSum=0.563;QD=1.34;ReadPosRankSum=-0.849;VQSLOD=1.8289;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:30:8.44:15,0,8	0/0:3,0:4:2.84:0,3,14	./.	./.	0/0:14,0:14:2.99:0,3,24	1/1:24,0:23:12.01:141,12,0	0/1:29,0:29:20.94:60,0,21	./.	0/0:16,0:16:5.99:0,6,55	0/1:24,0:22:20.91:21,0,22	0/0:17,0:17:2.99:0,3,24	1/1:20,0:20:3:25,3,0	0/0:18,0:18:5.81:0,6,36	0/1:17,0:16:12.64:16,0,13	0/0:9,0:10:4.35:0,4,17	0/0:7,0:9:5.68:0,6,28	0/1:14,7:21:30.92:35,0,31	0/0:7,0:8:2.84:0,3,14	1/1:15,0:14:0.47:1,0,0	0/0:16,0:16:2.84:0,3,14	0/0:29,0:37:2.73:0,3,14	1/1:23,0:23:2.23:23,2,0	0/0:15,0:18:11.32:0,11,55	0/1:23,7:31:67.73:102,0,68	0/1:11,0:10:29.50:30,0,75	0/0:12,0:14:7.11:0,7,39	0/0:10,0:15:11.15:0,11,56	0/0:3,0:4:5.64:0,6,27
chr10	101287878	.	TC	T	8604.31	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=13.165;DP=683;FS=7.127;HRun=5;HaplotypeScore=88.8074;InbreedingCoeff=0.9995;MQ=78.64;MQ0=0;MQRankSum=-3.112;QD=29.88;ReadPosRankSum=0.959;VQSLOD=5.0955;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:71,0:71:99:0,205,2742	1/1:3,7:10:27.08:305,27,0	0/0:23,0:23:54:0,54,772	0/0:15,0:15:43.32:0,43,529	0/0:33,0:33:90.29:0,90,1206	0/0:22,0:22:63.21:0,63,852	0/0:17,0:17:48.16:0,48,656	1/1:4,19:23:57.14:637,57,0	0/0:24,0:24:72.24:0,72,985	0/0:34,0:34:99:0,102,1360	0/0:21,0:21:63.21:0,63,861	0/0:16,0:16:45.14:0,45,600	0/0:25,0:25:72.23:0,72,970	0/0:22,0:22:60.18:0,60,788	1/1:2,24:26:75.20:837,75,0	0/0:27,0:27:75.25:0,75,1022	0/0:32,0:31:90.29:0,90,1216	1/1:0,17:17:48.14:544,48,0	1/1:3,18:21:60.17:678,60,0	1/1:6,19:25:63.18:714,63,0	1/1:2,22:23:57.16:646,57,0	1/1:1,24:25:57.16:643,57,0	1/1:0,14:14:35.92:408,36,0	1/1:3,34:37:99:1095,99,0	0/0:13,0:13:39.12:0,39,516	1/1:2,35:37:99:1189,105,0	1/1:2,19:21:57.15:637,57,0	1/1:0,8:8:24.07:272,24,0
chr10	101287938	.	G	GA	7608.46	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.401;DP=691;FS=0.663;HRun=0;HaplotypeScore=97.1004;InbreedingCoeff=0.9991;MQ=76.15;MQ0=0;MQRankSum=-6.938;QD=37.85;ReadPosRankSum=0.709;VQSLOD=4.8040;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,169,2330	1/1:0,15:15:39.13:587,39,0	0/0:19,0:19:53.82:0,54,690	0/0:24,0:24:63.20:0,63,851	0/0:33,0:33:96.31:0,96,1325	0/0:25,0:25:72.24:0,72,1005	0/0:30,0:30:87.29:0,87,1216	1/1:0,24:24:72.21:1048,72,0	0/0:24,0:24:72.24:0,72,1004	0/0:37,0:37:99:0,108,1486	0/0:21,0:21:63.20:0,63,863	0/0:20,0:20:60.20:0,60,836	0/0:29,0:29:87.29:0,87,1211	0/0:32,0:32:96.32:0,96,1342	1/1:2,20:22:54.07:765,54,0	0/0:22,0:22:66.22:0,66,923	0/0:33,0:33:99:0,99,1378	1/1:0,7:7:21.07:308,21,0	1/1:3,12:16:38.79:559,39,0	1/1:1,22:23:54.14:802,54,0	1/1:2,30:33:78.22:1165,78,0	0/0:18,0:18:51.17:0,51,711	0/0:17,0:17:48.16:0,48,669	0/0:29,0:29:84.28:0,84,1173	0/0:20,0:20:57.19:0,57,797	1/1:3,25:28:75.21:1111,75,0	1/1:0,24:24:60.20:902,60,0	1/1:0,8:8:24.08:362,24,0
chr10	101288887	.	CAAAA	C	5032.57	PASS	AB=0.614;AC=24;AF=0.429;AN=56;BaseQRankSum=10.583;DP=603;FS=13.268;HRun=16;HaplotypeScore=137.1883;InbreedingCoeff=0.8145;MQ=68.03;MQ0=0;MQRankSum=-2.015;QD=18.78;ReadPosRankSum=6.920;VQSLOD=1.5513;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:42.32:0,42,474	1/1:4,9:14:0.35:254,0,0	0/0:24,0:15:23.88:0,24,316	0/0:12,0:9:11.93:0,12,161	0/0:33,0:37:95.74:0,96,1708	0/0:15,0:20:45.14:0,45,774	0/0:15,0:19:24.73:0,25,884	0/1:9,11:20:8.99:358,0,9	0/0:13,0:16:33.07:0,33,556	0/0:23,0:25:55.02:0,55,944	0/0:19,0:24:69.01:0,69,1235	0/0:13,0:17:42.14:0,42,808	0/0:17,0:18:42.06:0,42,774	0/0:20,0:23:51.07:0,51,849	1/1:4,14:19:38.90:475,39,0	0/0:21,0:23:21.27:0,21,479	0/0:14,0:22:54.62:0,55,899	1/1:3,9:12:11.91:153,12,0	1/1:5,14:22:17.66:537,18,0	1/1:3,23:26:50.56:626,51,0	0/1:4,9:14:21.68:252,0,22	1/1:4,1:24:40.57:240,41,0	1/1:5,0:24:35.92:203,36,0	1/1:1,1:15:28.95:188,29,0	0/0:22,0:25:63.06:0,63,1050	1/1:15,17:32:29.22:657,29,0	1/1:2,20:24:50.64:637,51,0	1/1:7,14:21:17.88:454,18,0
chr10	101289729	.	G	GT	1299.59	PASS	AB=0.896;AC=18;AF=0.321;AN=56;BaseQRankSum=-3.620;DP=603;FS=2.697;HRun=13;HaplotypeScore=73.7483;InbreedingCoeff=0.1965;MQ=71.72;MQ0=1;MQRankSum=2.200;QD=4.53;ReadPosRankSum=0.318;VQSLOD=1.7902;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,2:23:16.71:0,17,260	0/0:7,0:7:20.35:0,20,133	0/1:20,2:16:23.33:23,0,69	0/1:18,0:15:3.45:3,0,43	0/0:25,2:27:12.66:0,13,375	0/0:28,0:31:59.03:0,59,374	0/1:20,6:27:33.94:34,0,223	0/0:33,0:33:15.73:0,16,250	0/0:18,0:18:47.52:0,48,324	0/1:23,1:24:25.67:26,0,117	0/1:16,2:18:31.88:32,0,115	0/0:20,0:20:44.52:0,45,307	0/1:20,3:24:6.08:6,0,244	0/0:19,1:22:17.71:0,18,247	0/0:27,1:28:42.57:0,43,431	1/1:2,21:22:42.05:390,42,0	0/0:23,2:25:19.70:0,20,280	0/0:19,0:20:9.87:0,10,230	0/0:16,0:16:11.59:0,12,179	0/1:19,5:25:23.29:23,0,240	0/1:5,3:8:29.15:44,0,29	1/1:4,10:17:33.09:263,33,0	1/1:5,18:23:19.35:316,19,0	1/1:5,16:23:32.56:293,33,0	0/0:18,2:20:16.75:0,17,260	0/0:25,0:26:21.67:0,22,267	0/1:25,3:31:13.30:13,0,319	0/1:4,0:4:14.24:14,0,32
chr10	101290533	.	A	ATGTG	1359.76	PASS	AB=0.667;AC=9;AF=0.161;AN=56;BaseQRankSum=6.236;DP=580;FS=5.106;HRun=0;HaplotypeScore=116.0954;InbreedingCoeff=0.8087;MQ=63.43;MQ0=6;MQRankSum=-6.996;QD=17.89;ReadPosRankSum=0.978;VQSLOD=3.2536;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,6:16:19.22:378,19,0	0/0:12,0:12:27.09:0,27,465	0/0:22,0:17:45.12:0,45,806	0/0:16,0:8:17.56:0,18,350	0/0:24,0:23:69.21:0,69,1300	0/0:23,0:22:56.37:0,56,1098	0/0:9,0:9:27.08:0,27,503	0/0:31,0:31:93.28:0,93,1688	0/0:17,0:17:51.17:0,51,1004	0/0:25,0:25:72.23:0,72,1373	0/0:34,0:34:99:0,99,1920	0/0:21,0:21:60.15:0,60,1002	0/0:25,0:25:66.68:0,67,1280	0/0:24,0:24:66.20:0,66,1243	0/0:17,0:16:42.12:0,42,654	1/1:6,12:19:24.60:594,25,0	0/0:17,0:17:42.13:0,42,775	0/0:34,0:34:78.74:0,79,1442	0/0:22,0:21:54.18:0,54,963	0/0:23,0:22:63.21:0,63,1076	0/0:27,0:27:51.04:0,51,821	1/1:2,4:6:8.68:209,9,0	0/1:8,7:16:5.63:200,0,6	1/1:6,11:19:1.64:128,2,0	0/0:19,0:19:54.19:0,54,1066	0/0:25,0:25:69.22:0,69,1147	0/0:33,0:33:77.23:0,77,1266	0/0:4,0:4:11.52:0,12,141
chr10	101290537	.	A	ATG	4704.34	PASS	AB=0.704;AC=24;AF=0.429;AN=56;BaseQRankSum=-6.468;DP=603;FS=0.914;HRun=0;HaplotypeScore=96.6784;InbreedingCoeff=0.5847;MQ=62.87;MQ0=6;MQRankSum=-1.593;QD=14.26;ReadPosRankSum=1.193;VQSLOD=4.8149;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:17.71:165,18,0	0/1:5,10:15:5.55:214,0,6	0/0:24,0:19:15.03:0,15,157	0/0:18,0:8:5.38:0,5,41	0/0:24,0:25:17.78:0,18,362	0/0:21,0:21:35.31:0,35,381	0/0:9,0:9:18.05:0,18,207	1/1:20,12:34:24.73:376,25,0	0/0:15,0:16:38.94:0,39,428	0/0:24,0:24:39.41:0,39,422	0/0:29,0:33:68.67:0,69,711	0/0:21,0:21:42.04:0,42,421	0/0:21,0:23:47.97:0,48,531	0/0:20,0:22:32.91:0,33,349	1/1:5,14:18:11.35:443,11,0	1/1:19,0:19:29.95:259,30,0	0/0:16,0:17:35.81:0,36,363	0/1:29,8:37:99:156,0,152	1/1:14,6:19:18.06:268,18,0	0/1:12,15:26:51.41:556,0,51	1/1:7,24:32:39:604,39,0	1/1:8,0:8:12.46:104,12,0	1/1:20,0:20:9:79,9,0	0/1:22,0:21:2.99:101,0,3	0/0:18,0:18:36.10:0,36,413	0/1:6,18:24:0.57:668,0,1	0/1:10,20:33:80.77:618,0,81	1/1:1,2:3:6.02:93,6,0
chr10	101291560	.	GGA	G	218.72	PASS	AB=0.934;AC=13;AF=0.271;AN=48;BaseQRankSum=2.108;DP=406;FS=10.447;HRun=0;HaplotypeScore=57.8337;InbreedingCoeff=-0.0288;MQ=67.94;MQ0=21;MQRankSum=0.670;QD=1.38;ReadPosRankSum=1.017;VQSLOD=0.0976;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:2.99:0,3,23	./.	./.	0/0:39,0:16:0:0,0,0	0/0:15,1:13:3.01:0,3,41	1/1:13,4:18:11.65:95,12,0	0/1:15,1:16:13.11:13,0,212	0/0:21,0:20:15.26:0,15,101	0/0:10,0:9:15.05:0,15,215	0/1:20,0:19:12.56:13,0,176	0/1:13,0:12:32.61:33,0,120	0/0:14,0:14:12.04:0,12,183	0/1:5,2:7:13.90:58,0,14	0/0:5,0:5:3.90:0,4,48	0/0:11,0:11:2.22:0,2,7	0/0:12,0:12:3.01:0,3,32	0/1:16,1:18:61.36:61,0,94	0/0:5,0:5:1.72:0,2,5	./.	1/1:6,0:6:0.55:2,1,0	0/1:9,0:7:0.01:0,0,0	./.	0/0:14,0:14:0:0,0,0	0/0:9,0:9:9:0,9,85	0/1:15,3:18:44.01:44,0,183	0/1:17,0:16:1.47:1,0,73	0/1:14,0:14:20.41:20,0,54	0/0:14,0:11:11.26:0,11,52
chr10	101291592	.	AGAGGGAGG	A	254.83	PASS	AB=1.000;AC=15;AF=0.313;AN=48;BaseQRankSum=-0.830;DP=274;FS=23.194;HRun=0;HaplotypeScore=60.4348;InbreedingCoeff=0.2230;MQ=42.28;MQ0=28;MQRankSum=-3.159;QD=2.55;ReadPosRankSum=-2.789;VQSLOD=-0.4425;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:1,0:1:3.01:0,3,31	./.	./.	0/0:11,0:10:3:0,3,25	0/0:16,0:15:14.37:0,14,211	0/0:9,0:9:21.05:0,21,505	0/1:26,0:24:72.69:73,0,188	0/0:10,0:9:20.27:0,20,332	0/0:11,0:10:12.02:0,12,170	0/0:9,0:8:22.30:0,22,373	0/0:9,0:7:14.97:0,15,248	0/0:5,0:3:5.89:0,6,40	0/1:3,0:3:13.91:14,0,85	0/0:8,0:8:2.88:0,3,15	1/1:6,0:5:3.01:53,3,0	0/0:15,0:15:1.99:0,2,279	1/1:4,0:3:1.36:3,1,0	0/0:9,0:5:9.02:0,9,114	1/1:4,0:4:3.14:19,3,0	1/1:13,0:7:2.27:24,2,0	./.	0/1:10,0:9:0:0,0,0	1/1:7,0:5:3.01:50,3,0	0/0:13,0:12:23.42:0,23,430	0/1:15,0:13:99:115,0,100	0/0:10,0:10:4.04:0,4,80	0/1:12,0:10:10.11:36,0,10
chr10	101291620	.	GGAGGGA	G	858.99	PASS	AB=0.903;AC=20;AF=0.417;AN=48;BaseQRankSum=2.930;DP=237;FS=6.629;HRun=0;HaplotypeScore=43.0919;InbreedingCoeff=0.4858;MQ=43.20;MQ0=25;MQRankSum=-2.042;QD=8.95;ReadPosRankSum=0.275;VQSLOD=0.2016;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:9:4.97:0,5,14	1/1:3,0:3:3.71:43,4,0	./.	./.	0/0:15,0:12:18.06:0,18,344	0/0:16,0:15:21.82:0,22,473	0/0:12,0:12:33.03:0,33,421	1/1:11,0:9:17.17:160,17,0	0/0:12,0:12:33.10:0,33,657	0/0:13,0:12:29.58:0,30,429	0/0:13,0:12:17.20:0,17,387	0/0:12,0:9:23.94:0,24,365	0/0:4,0:3:9.03:0,9,221	0/1:9,0:9:15.33:15,0,337	./.	1/1:3,0:2:0.89:2,1,0	0/0:7,0:6:14.90:0,15,212	1/1:5,0:4:4.93:42,5,0	1/1:4,8:10:26.99:299,27,0	0/1:9,0:7:2.13:22,0,2	1/1:9,0:3:3:36,3,0	0/0:3,0:2:0:0,0,0	./.	1/1:6,0:4:5.74:37,6,0	0/0:7,0:6:18.04:0,18,418	0/1:11,0:8:30.13:158,0,30	0/1:4,7:11:6.96:185,0,7	1/1:2,4:6:2.94:18,3,0
chr10	101291624	.	GGA	G	604.04	PASS	AB=0.878;AC=18;AF=0.360;AN=50;BaseQRankSum=2.038;DP=263;FS=0.792;HRun=0;HaplotypeScore=35.8564;InbreedingCoeff=0.3507;MQ=47.27;MQ0=27;MQRankSum=0.862;QD=5.21;ReadPosRankSum=-1.767;VQSLOD=2.0865;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:9:7.74:8,0,30	0/1:3,1:4:4.96:29,0,5	0/0:1,0:1:0.47:0,0,1	./.	0/0:14,0:11:18.06:0,18,272	0/0:20,0:19:32.99:0,33,455	0/0:11,0:11:21.07:0,21,302	1/1:12,1:11:8.70:106,9,0	0/0:12,0:12:30.10:0,30,450	0/0:15,0:14:35.69:0,36,453	0/0:16,0:15:18.94:0,19,238	0/0:13,0:10:18.06:0,18,266	0/0:4,0:4:12.04:0,12,184	0/1:9,0:9:16.32:16,0,206	0/0:10,0:10:3:0,3,25	1/1:3,0:2:2.98:22,3,0	0/0:9,0:8:18.01:0,18,202	0/1:6,0:5:21.87:63,0,22	1/1:14,0:10:6.16:166,6,0	0/1:5,9:12:6.64:27,0,7	1/1:10,1:3:5.80:49,6,0	0/0:2,0:1:0:0,0,0	./.	1/1:6,0:4:5.90:37,6,0	0/0:10,0:9:15.05:0,15,232	0/1:10,2:9:25.53:161,0,26	1/1:9,1:10:8.96:78,9,0	./.
chr10	101291862	.	CT	C	4539.18	PASS	AB=0.857;AC=32;AF=0.571;AN=56;BaseQRankSum=7.006;DP=492;FS=5.694;HRun=11;HaplotypeScore=53.4980;InbreedingCoeff=0.7180;MQ=62.33;MQ0=5;MQRankSum=0.676;QD=14.01;ReadPosRankSum=0.050;VQSLOD=4.7074;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,34:46:52.11:653,52,0	0/1:3,4:7:18.24:62,0,18	0/1:12,0:9:16.23:16,0,63	0/1:10,0:8:17.93:18,0,84	0/0:17,0:17:32.95:0,33,334	0/1:15,3:19:1.37:1,0,370	0/0:19,2:21:10.81:0,11,297	1/1:13,39:52:99:907,111,0	0/0:12,0:13:32.85:0,33,307	0/0:16,0:14:30.07:0,30,311	0/0:17,0:18:42.11:0,42,448	0/0:15,0:15:41.31:0,41,415	0/0:10,0:9:23.99:0,24,232	0/0:13,0:13:30.01:0,30,295	1/1:1,11:12:26.63:221,27,0	1/1:1,9:10:26.97:222,27,0	0/0:22,1:23:35.49:0,35,575	1/1:10,14:23:41.64:344,42,0	1/1:8,10:18:31.93:243,32,0	1/1:4,18:23:44.69:368,45,0	1/1:1,14:16:40.99:326,41,0	1/1:2,9:11:20.95:172,21,0	1/1:2,6:8:17.97:148,18,0	1/1:2,17:19:41.95:345,42,0	0/0:19,1:20:14.43:0,14,344	1/1:5,12:17:38.57:295,39,0	1/1:5,9:14:17.98:148,18,0	1/1:2,2:4:5.96:49,6,0
chr10	101292607	.	A	AGT	2154.22	PASS	AB=0.526;AC=18;AF=0.321;AN=56;BaseQRankSum=-1.086;DP=545;FS=5.616;HRun=0;HaplotypeScore=97.4507;InbreedingCoeff=0.7995;MQ=68.60;MQ0=4;MQRankSum=-0.531;QD=12.60;ReadPosRankSum=-2.153;VQSLOD=2.6159;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:69.90:0,70,950	0/1:0,8:8:0:0,0,0	0/0:37,0:27:63:0,63,902	0/0:28,0:18:35.62:0,36,533	0/0:20,0:20:54.16:0,54,738	0/0:14,0:14:29:0,29,387	0/0:31,0:31:75.16:0,75,1000	1/1:23,0:23:48.82:769,49,0	0/0:18,0:18:45.15:0,45,635	0/0:19,0:19:57.18:0,57,790	0/0:17,0:17:47.96:0,48,609	0/0:13,0:13:36.12:0,36,502	0/0:17,0:17:41.93:0,42,561	0/0:16,0:16:42.13:0,42,562	1/1:1,21:23:6.02:102,6,0	0/0:17,0:17:39.10:0,39,509	0/0:20,0:20:48.06:0,48,629	1/1:6,14:19:1.80:210,2,0	1/1:5,9:14:9.07:292,9,0	1/1:3,17:20:6.02:110,6,0	1/1:2,20:21:9.03:164,9,0	0/0:18,0:17:45.05:0,45,612	0/0:20,0:20:45.08:0,45,586	0/0:22,0:22:51.17:0,51,703	0/0:18,0:18:45.15:0,45,631	1/1:3,12:16:21.50:488,21,0	0/1:3,13:16:9.13:49,0,9	1/1:0,8:8:9.03:154,9,0
chr10	101294225	.	T	TCAAAAACACACTGTATTCT	52662.89	PASS	AB=0.714;AC=55;AF=0.982;AN=56;BaseQRankSum=-7.810;DP=392;FS=1.950;HRun=0;HaplotypeScore=478.5469;InbreedingCoeff=-0.0364;MQ=45.49;MQ0=0;MQRankSum=-1.790;QD=134.34;ReadPosRankSum=-0.418;VQSLOD=3.9039;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:21.54:1339,22,0	1/1:9,0:9:23.80:1345,24,0	1/1:0,1:2:6.02:468,6,0	0/1:3,0:5:18.43:670,0,18	1/1:17,0:17:39.91:2316,40,0	1/1:18,0:17:38.67:2183,39,0	1/1:7,0:7:21.05:1213,21,0	1/1:17,0:17:51.17:3130,51,0	1/1:23,0:23:39.95:2838,40,0	1/1:19,0:19:47.59:3004,48,0	1/1:26,0:26:43.96:3113,44,0	1/1:13,0:13:32.53:1117,33,0	1/1:25,0:25:48.19:3596,48,0	1/1:13,0:13:4.84:1019,5,0	1/1:21,0:21:44.27:2261,44,0	1/1:20,0:20:51.93:3087,52,0	1/1:7,0:7:18.03:1253,18,0	1/1:8,0:8:21.07:883,21,0	1/1:5,0:5:12.04:789,12,0	1/1:11,0:11:13.50:1532,14,0	1/1:3,0:3:6.02:186,6,0	1/1:15,0:15:18.44:2151,18,0	1/1:17,0:17:40.30:2270,40,0	1/1:8,0:8:12.04:457,12,0	1/1:17,0:17:25.05:2639,25,0	1/1:22,0:22:61.31:3490,61,0	1/1:31,0:31:70.90:3998,71,0	1/1:3,0:3:9.01:314,9,0
chr10	101296492	.	CTGTT	C	20609.83	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=18.383;DP=894;FS=13.546;HRun=0;HaplotypeScore=161.7803;InbreedingCoeff=0.9999;MQ=72.37;MQ0=0;MQRankSum=-5.064;QD=45.40;ReadPosRankSum=2.762;VQSLOD=4.9065;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:35:75.26:1434,75,0	1/1:1,12:13:33.11:636,33,0	0/0:27,0:27:69.23:0,69,1669	0/0:21,0:20:36.48:0,36,768	0/0:48,0:48:99:0,144,3844	0/0:28,0:28:84.29:0,84,2210	0/0:22,0:22:63.20:0,63,1658	1/1:2,40:42:99:2244,120,0	0/0:36,0:36:99:0,108,2871	0/0:52,0:52:99:0,154,4075	0/0:34,0:34:99:0,99,2627	0/0:42,0:42:99:0,126,3421	0/0:49,0:49:99:0,144,3822	0/0:34,0:34:99:0,99,2592	1/1:2,50:52:99:2279,120,0	1/1:0,27:27:72.19:1390,72,0	0/0:24,0:24:72.22:0,72,1856	1/1:1,17:18:42.14:808,42,0	1/1:0,17:17:51.15:905,51,0	1/1:1,28:29:78.27:1482,78,0	1/1:0,37:37:65.28:1326,65,0	1/1:0,36:36:78.27:1495,78,0	1/1:0,22:22:50.94:982,51,0	1/1:3,19:22:40.45:811,40,0	0/0:23,0:23:63.22:0,63,1677	1/1:2,40:42:41.82:2157,42,0	1/1:0,44:44:99:1909,99,0	1/1:0,18:18:39.13:753,39,0
chr10	101297644	.	AAGAGAGAGAGAGAGAGAGAGAGAGAG	A	4194.24	PASS	AB=0.667;AC=19;AF=0.352;AN=54;BaseQRankSum=7.495;DP=549;FS=39.810;HRun=0;HaplotypeScore=250.9194;InbreedingCoeff=0.7176;MQ=46.58;MQ0=38;MQRankSum=-3.685;QD=22.67;ReadPosRankSum=-1.676;VQSLOD=0.9858;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:21.07:0,21,1736	1/1:4,7:11:6.02:404,6,0	./.	0/0:52,0:5:0.89:0,1,2	0/0:16,0:15:9.97:0,10,775	0/0:12,0:10:21.07:0,21,1323	0/0:20,0:22:21.07:0,21,1439	1/1:26,0:24:5.50:50,5,0	0/0:4,0:17:3.01:0,3,52	0/0:23,0:23:54.18:0,54,4207	0/0:12,0:12:21.07:0,21,1177	0/0:17,0:16:18.05:0,18,1524	0/0:19,0:19:39.13:0,39,3389	0/0:9,0:9:12.51:0,13,1348	1/1:8,16:24:8.74:606,9,0	0/0:18,0:18:19.99:0,20,1771	0/0:12,0:17:15.05:0,15,1157	0/1:6,6:12:21.09:196,0,21	1/1:14,8:20:23.98:654,24,0	1/1:11,11:22:11.95:347,12,0	1/1:19,8:27:2.84:157,3,0	0/0:12,0:12:6.02:0,6,550	0/0:16,0:16:11.37:0,11,1014	0/0:19,0:17:24.08:0,24,1814	0/0:11,0:11:18.06:0,18,1599	1/1:9,12:20:24.27:882,24,0	1/1:10,0:10:12.04:696,12,0	1/1:4,5:9:3.01:202,3,0
chr10	101297663	.	AGAGAGAG	A	919.74	PASS	AB=0.960;AC=9;AF=0.161;AN=56;BaseQRankSum=9.042;DP=486;FS=6.225;HRun=0;HaplotypeScore=114.4531;InbreedingCoeff=-0.1428;MQ=48.21;MQ0=42;MQRankSum=-5.166;QD=7.60;ReadPosRankSum=1.766;VQSLOD=1.8110;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:39.11:0,39,831	0/1:10,0:8:29.13:87,0,29	0/0:23,0:4:12.04:0,12,151	0/0:30,0:2:0.47:0,0,1	0/0:16,0:16:30.10:0,30,468	0/0:18,0:16:38.69:0,39,669	0/0:25,0:24:54.11:0,54,954	0/0:15,0:13:36.07:0,36,439	0/0:17,0:14:15.04:0,15,225	0/0:26,0:26:78.26:0,78,1773	0/0:19,0:19:45.15:0,45,682	0/0:15,0:14:35.95:0,36,813	0/0:22,0:22:57.65:0,58,1373	0/0:12,0:12:23.27:0,23,623	0/1:20,0:20:26.24:132,0,26	0/0:18,0:17:32.22:0,32,669	0/0:18,0:17:39.13:0,39,798	0/1:9,0:9:31.23:43,0,31	0/1:13,0:11:99:278,0,118	0/1:18,0:16:40.16:40,0,95	0/1:21,0:21:14.14:14,0,172	0/0:12,0:12:15.03:0,15,260	0/0:20,0:20:27.62:0,28,556	0/0:23,0:19:45.13:0,45,846	0/0:13,0:13:33.11:0,33,521	0/1:17,0:15:99:230,0,229	0/1:3,4:7:58.19:191,0,58	0/1:6,0:6:32.14:42,0,32
chr10	101297669	.	AG	A	737.16	PASS	AB=0.934;AC=13;AF=0.241;AN=54;BaseQRankSum=8.705;DP=495;FS=3.175;HRun=1;HaplotypeScore=81.5068;InbreedingCoeff=0.4412;MQ=48.45;MQ0=37;MQRankSum=-5.837;QD=6.14;ReadPosRankSum=0.100;VQSLOD=0.4660;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:42.10:0,42,514	1/1:7,2:7:4.44:15,4,0	0/0:18,0:5:15.05:0,15,189	./.	0/0:17,0:17:30.08:0,30,364	0/0:22,0:20:44.58:0,45,543	0/0:26,0:25:56.28:0,56,667	0/1:13,5:15:99:164,0,112	0/0:18,0:15:15.04:0,15,189	0/0:28,0:28:81.26:0,81,1071	0/0:21,0:21:45.01:0,45,567	0/0:16,0:15:38.93:0,39,474	0/0:23,0:23:57.66:0,58,770	0/0:14,0:13:26.28:0,26,360	1/1:19,0:19:9.16:31,9,0	0/0:22,0:21:41.46:0,41,534	0/0:17,0:16:36.11:0,36,458	0/0:9,0:9:0.90:0,1,34	0/1:13,0:10:22.78:209,0,23	0/1:16,1:15:2.87:36,0,3	1/1:11,0:11:3.89:34,4,0	0/0:14,0:14:20.10:0,20,207	0/0:22,0:22:38.74:0,39,462	0/0:23,0:19:44.51:0,45,539	0/0:15,0:15:33.10:0,33,410	0/1:16,1:15:63.78:137,0,64	1/1:4,5:9:21.06:266,21,0	0/1:7,0:6:2.05:2,0,19
chr10	101299078	.	AACAC	A	3674.13	PASS	AB=0.800;AC=20;AF=0.385;AN=52;BaseQRankSum=3.177;DP=601;FS=3.866;HRun=0;HaplotypeScore=106.7276;InbreedingCoeff=0.4701;MQ=58.68;MQ0=15;MQRankSum=-0.596;QD=15.06;ReadPosRankSum=1.356;VQSLOD=3.0696;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:30:6.31:0,6,153	1/1:2,6:9:21.07:332,21,0	./.	./.	0/0:21,0:21:29.69:0,30,588	0/0:21,0:22:44.14:0,44,801	0/0:16,0:17:35.84:0,36,698	0/1:23,0:21:6.86:129,0,7	0/1:7,1:18:30.49:30,0,73	0/0:21,0:23:44.61:0,45,801	0/0:20,0:26:53.35:0,53,951	0/0:19,0:21:29.57:0,30,517	1/1:8,6:16:10.58:278,11,0	0/0:19,0:18:27.98:0,28,612	0/1:8,6:16:33.59:269,0,34	0/0:11,0:18:3.01:0,3,52	0/1:24,0:24:2.57:3,0,726	0/1:8,4:12:22.53:222,0,23	1/1:9,5:14:15.01:205,15,0	1/1:14,14:29:48.10:654,48,0	1/1:13,14:26:27.09:427,27,0	0/0:12,0:15:6.02:0,6,102	0/0:12,0:16:6.02:0,6,91	0/0:20,0:31:11.74:0,12,132	0/0:16,0:18:23.75:0,24,361	1/1:16,10:29:45.13:634,45,0	0/1:9,3:13:19.17:253,0,19	1/1:5,4:9:15.05:237,15,0
chr10	101301250	.	G	GA	1396.60	PASS	AB=0.743;AC=9;AF=0.161;AN=56;BaseQRankSum=7.248;DP=499;FS=3.222;HRun=10;HaplotypeScore=55.6032;InbreedingCoeff=0.6915;MQ=66.96;MQ0=2;MQRankSum=-2.119;QD=17.03;ReadPosRankSum=0.799;VQSLOD=4.0765;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:4,14:18:1.16:400,0,1	0/0:8,0:9:20.01:0,20,154	0/1:10,0:7:5.74:6,0,49	0/0:11,0:9:8.69:0,9,99	0/0:28,0:28:71.70:0,72,579	0/0:18,0:18:38.87:0,39,312	0/0:10,0:11:32:0,32,252	0/0:28,0:28:56.85:0,57,468	0/0:14,0:14:29.96:0,30,246	0/0:13,0:13:22.48:0,22,175	0/0:18,0:20:22.62:0,23,311	0/0:19,0:20:52.95:0,53,422	0/0:19,0:20:46.95:0,47,375	0/0:18,0:20:55.01:0,55,430	0/0:17,0:17:35.70:0,36,280	1/1:1,17:18:42.11:448,42,0	0/0:20,0:22:64.01:0,64,504	0/0:20,0:20:56.89:0,57,463	0/0:23,0:24:64.77:0,65,499	0/0:18,1:19:19.83:0,20,364	0/0:15,0:15:41.95:0,42,345	0/1:7,7:14:3.59:171,0,4	1/1:2,11:13:30.55:321,31,0	1/1:2,6:9:20.89:206,21,0	0/0:22,0:23:52.04:0,52,421	0/0:18,0:18:50.74:0,51,408	0/0:29,0:30:82.91:0,83,670	0/0:16,1:17:3.30:0,3,253
chr10	101301998	.	C	CGG	898.02	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=3.988;DP=372;FS=24.797;HRun=7;HaplotypeScore=52.0286;InbreedingCoeff=0.9433;MQ=80.02;MQ0=0;MQRankSum=-1.225;QD=16.33;ReadPosRankSum=-1.698;VQSLOD=-0.3067;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,1:16:18.94:144,19,0	0/0:9,0:9:24.07:0,24,280	0/0:14,0:14:26.08:0,26,277	0/0:11,0:11:14.46:0,14,108	0/0:15,0:15:45.13:0,45,524	0/0:21,0:21:56.99:0,57,640	0/0:7,0:7:21.06:0,21,245	0/0:15,0:15:36.09:0,36,407	1/1:0,4:5:14.54:206,15,0	0/0:13,0:13:30.07:0,30,340	0/0:19,0:19:53.63:0,54,592	0/0:11,0:11:30.08:0,30,349	0/0:21,0:21:54.11:0,54,604	0/0:16,0:16:42.12:0,42,489	0/0:19,0:19:39.10:0,39,453	1/1:1,3:15:33.07:386,33,0	0/0:23,0:23:60.17:0,60,698	0/0:9,0:9:24.06:0,24,279	0/0:11,0:11:21.03:0,21,239	0/0:13,0:13:33.09:0,33,384	0/0:20,0:20:57.14:0,57,643	1/1:1,0:3:3:29,3,0	1/1:2,2:9:15.03:165,15,0	1/1:2,0:7:15.50:146,15,0	0/0:13,0:13:23.59:0,24,269	0/0:14,0:14:27.06:0,27,314	0/0:17,0:17:42.12:0,42,489	0/0:6,0:6:18.05:0,18,209
chr10	101302882	.	TTAATAATAATAA	T	1270.35	PASS	AC=8;AF=0.174;AN=46;BaseQRankSum=4.642;DP=234;FS=2.459;HRun=0;HaplotypeScore=85.3140;InbreedingCoeff=0.6663;MQ=78.39;MQ0=1;MQRankSum=-4.334;QD=38.50;ReadPosRankSum=2.531;VQSLOD=3.0373;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,9:15:15.05:524,15,0	./.	./.	0/0:6,0:6:3:0,3,36	0/0:10,0:10:9.03:0,9,433	0/0:11,0:11:27.09:0,27,1454	0/0:4,0:4:3.01:0,3,177	0/0:39,0:39:57.19:0,57,2435	1/1:1,2:3:3.01:105,3,0	0/0:3,0:3:6.02:0,6,354	0/0:7,0:7:9.03:0,9,460	0/0:7,0:7:12.04:0,12,707	0/0:9,0:9:9.03:0,9,531	0/0:7,0:7:12.04:0,12,681	0/0:6,0:7:6.02:0,6,267	1/1:4,6:10:15.05:524,15,0	0/0:17,0:17:36.12:0,36,1899	0/0:8,0:8:12.04:0,12,424	0/0:12,0:11:12.04:0,12,508	0/0:6,0:7:9.03:0,9,358	./.	./.	1/1:1,0:5:9.03:251,9,0	./.	0/0:3,0:7:15.05:0,15,715	0/0:4,0:5:6.02:0,6,290	0/0:5,0:7:15.05:0,15,584	0/0:15,0:17:27.09:0,27,1120
chr10	101304095	.	AACACAC	A	3000.13	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=5.745;DP=545;FS=0.542;HRun=0;HaplotypeScore=150.9610;InbreedingCoeff=0.9060;MQ=63.24;MQ0=8;MQRankSum=-8.278;QD=20.00;ReadPosRankSum=-0.038;VQSLOD=3.4202;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:29:21.06:0,21,399	1/1:4,2:6:5.98:82,6,0	0/0:31,0:16:6.49:0,6,130	0/0:31,0:19:9.03:0,9,213	0/0:16,0:17:27.09:0,27,776	0/0:16,0:16:30.10:0,30,829	0/0:28,0:29:50.38:0,50,1505	1/1:14,3:17:15.03:248,15,0	0/0:18,0:20:19.32:0,19,345	0/0:11,0:13:21.06:0,21,408	0/0:9,0:9:15.05:0,15,438	0/0:17,0:17:33.11:0,33,879	0/0:18,0:19:33.11:0,33,966	0/0:18,0:19:45.15:0,45,1342	1/1:6,12:20:51.09:864,51,0	0/0:8,0:14:24.65:0,25,625	0/0:38,0:40:99:0,99,2736	1/1:9,4:13:12.04:250,12,0	1/1:6,2:7:6.02:125,6,0	1/1:3,3:6:5.96:112,6,0	1/1:24,12:37:11.09:206,11,0	0/0:13,0:16:14.88:0,15,287	0/0:7,0:14:21.07:0,21,447	0/0:29,0:44:77.12:0,77,1610	0/0:16,0:16:42.12:0,42,1265	1/1:8,6:16:27.56:511,28,0	1/1:8,8:18:27.09:517,27,0	1/1:5,4:9:15.05:292,15,0
chr10	101304134	.	GCA	G	6616.05	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=8.994;DP=599;FS=1.673;HRun=0;HaplotypeScore=122.7563;InbreedingCoeff=0.9198;MQ=53.47;MQ0=9;MQRankSum=-2.652;QD=20.74;ReadPosRankSum=1.977;VQSLOD=5.4010;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,23:33:39.54:529,40,0	1/1:1,10:11:27.09:343,27,0	0/0:39,0:18:48.13:0,48,725	0/0:41,0:18:38.26:0,38,690	0/0:14,0:14:36.12:0,36,576	0/0:15,0:15:39.13:0,39,652	0/0:21,1:22:6.96:0,7,634	1/1:8,16:23:9.27:532,9,0	1/1:4,12:16:33.11:416,33,0	0/0:19,0:19:51.01:0,51,744	0/0:9,0:9:18.06:0,18,285	0/0:13,0:13:35.43:0,35,535	0/0:14,1:15:0.94:0,1,533	0/0:26,0:26:63.01:0,63,1000	1/1:4,14:18:39.12:492,39,0	1/1:4,13:17:27.97:342,28,0	0/0:47,1:48:85.12:0,85,1790	1/1:4,13:17:39.08:477,39,0	1/1:4,8:12:15.05:191,15,0	1/1:1,11:12:20.88:267,21,0	1/1:9,42:51:40.63:772,41,0	1/1:6,10:16:20.81:259,21,0	1/1:4,8:12:17.77:229,18,0	1/1:13,20:33:45.01:541,45,0	0/0:19,0:19:42.14:0,42,698	1/1:2,17:19:3.93:582,4,0	1/1:5,13:18:27.08:340,27,0	1/1:1,9:10:24.08:305,24,0
chr10	101304557	.	GC	G	1181.70	PASS	AB=1.000;AC=23;AF=0.426;AN=54;BaseQRankSum=3.762;DP=275;FS=1.228;HRun=2;HaplotypeScore=40.2975;InbreedingCoeff=0.6914;MQ=90.25;MQ0=0;MQRankSum=0.383;QD=14.07;ReadPosRankSum=-2.678;VQSLOD=1.9493;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:21.37:0,21,131	1/1:0,5:5:6.02:77,6,0	0/0:25,0:23:35.45:0,35,506	0/0:14,0:15:17.58:0,18,348	0/0:12,0:12:32.42:0,32,412	0/0:27,0:27:81.06:0,81,1037	0/0:11,0:11:33.04:0,33,426	1/1:2,7:9:14.96:156,15,0	1/1:8,0:8:10.17:75,10,0	0/0:6,0:6:18.04:0,18,248	0/0:8,0:8:21.02:0,21,255	0/0:14,0:14:42.10:0,42,590	0/0:13,0:13:39.10:0,39,521	0/0:17,0:17:47.70:0,48,518	1/1:0,2:2:3.01:39,3,0	0/1:9,0:9:12.86:13,0,53	0/0:17,0:17:51.14:0,51,727	1/1:1,2:3:9.01:100,9,0	1/1:0,6:6:17.98:182,18,0	1/1:0,7:7:20.85:235,21,0	1/1:1,6:7:6.02:77,6,0	0/1:8,0:8:30.08:55,0,30	0/1:6,0:6:1.41:1,0,65	0/0:2,0:2:2.90:0,3,16	0/0:10,0:10:27.06:0,27,379	1/1:0,8:8:24.04:270,24,0	1/1:5,1:6:9.19:98,9,0	./.
chr10	101304985	.	C	CA	5927.88	PASS	AB=0.804;AC=30;AF=0.536;AN=56;BaseQRankSum=-10.881;DP=578;FS=0.358;HRun=10;HaplotypeScore=60.0092;InbreedingCoeff=0.8464;MQ=70.16;MQ0=1;MQRankSum=2.388;QD=18.82;ReadPosRankSum=0.506;VQSLOD=5.4454;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:16:36.09:384,36,0	1/1:2,5:7:12.03:128,12,0	0/0:27,0:18:14.14:0,14,112	0/1:20,0:13:12.96:13,0,87	0/0:27,1:28:42.90:0,43,556	0/0:26,0:26:37.01:0,37,510	0/0:11,0:11:26.97:0,27,222	1/1:5,20:25:26.47:479,26,0	0/0:16,0:16:19.43:0,19,297	0/0:29,0:30:69.98:0,70,553	0/0:22,0:23:58.97:0,59,473	0/0:9,0:9:23.96:0,24,197	0/0:26,0:26:65.90:0,66,541	0/0:21,0:21:50.92:0,51,416	1/1:3,16:20:14.29:342,14,0	1/1:5,15:20:17.47:391,17,0	0/0:23,1:24:27.94:0,28,436	1/1:6,20:28:29.52:491,30,0	1/1:4,24:29:62.97:635,63,0	1/1:1,21:22:57.10:593,57,0	1/1:2,5:7:17.72:171,18,0	1/1:4,13:17:36.09:382,36,0	1/1:4,14:19:38.93:398,39,0	0/1:5,9:14:34.21:81,0,34	0/0:22,0:22:50.91:0,51,416	1/1:4,11:15:35.88:363,36,0	1/1:5,32:36:59.89:622,60,0	1/1:5,13:19:46.17:455,46,0
chr10	101306887	.	TAC	T	242.16	PASS	AB=0.889;AC=11;AF=0.239;AN=46;BaseQRankSum=2.973;DP=100;FS=12.190;HRun=0;HaplotypeScore=22.2948;InbreedingCoeff=0.4861;MQ=81.49;MQ0=5;MQRankSum=1.808;QD=8.97;ReadPosRankSum=0.616;VQSLOD=1.4017;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:15.01:0,15,218	./.	0/0:7,0:3:5.68:0,6,23	0/0:12,0:7:10.85:0,11,166	0/0:4,0:4:12.02:0,12,197	0/0:3,0:3:9.03:0,9,164	0/0:2,0:2:6.01:0,6,83	1/1:2,10:11:29.97:250,30,0	0/0:4,0:4:12.02:0,12,187	0/0:4,0:4:12.04:0,12,231	0/0:2,0:2:6.02:0,6,107	0/0:2,0:2:2.58:0,3,23	0/0:5,0:5:14.96:0,15,140	0/0:3,0:3:8.97:0,9,71	1/1:1,0:1:3:26,3,0	0/0:4,0:4:12.04:0,12,230	0/1:7,0:8:11.93:12,0,161	1/1:2,0:2:5.99:50,6,0	./.	./.	./.	0/0:1,0:1:2.99:0,3,24	0/0:2,0:2:6.02:0,6,106	0/0:1,0:1:3.01:0,3,58	0/0:6,0:6:15.05:0,15,288	./.	1/1:1,0:1:2.99:23,3,0	1/1:3,0:2:2.92:17,3,0
chr10	101307246	.	AAC	A	648.31	PASS	AB=0.877;AC=9;AF=0.167;AN=54;BaseQRankSum=3.431;DP=613;FS=2.069;HRun=0;HaplotypeScore=113.7839;InbreedingCoeff=0.2460;MQ=59.34;MQ0=3;MQRankSum=5.200;QD=4.27;ReadPosRankSum=1.745;VQSLOD=2.9411;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:26.55:0,27,253	0/0:3,0:9:8.58:0,9,52	./.	0/0:24,0:16:5.20:0,5,29	0/1:18,3:21:67.82:68,0,332	0/0:26,1:26:23.55:0,24,788	0/1:26,1:27:1.80:2,0,485	0/0:17,0:16:18.79:0,19,177	0/1:8,0:19:7.19:7,0,113	0/0:28,2:29:5.44:0,5,485	0/0:30,0:30:32.09:0,32,741	0/1:6,8:14:27.67:150,0,28	1/1:13,0:28:34.09:168,34,0	1/1:7,13:23:15.57:372,16,0	0/0:12,0:21:20.24:0,20,156	0/0:8,0:27:39:0,39,360	0/0:39,3:41:4.93:0,5,911	0/0:12,0:12:8.98:0,9,96	0/0:15,0:16:20.94:0,21,204	0/0:20,0:20:17.25:0,17,179	0/0:9,0:17:2.96:0,3,19	0/0:12,0:23:14.84:0,15,112	0/0:13,0:23:8.72:0,9,62	0/0:16,0:23:4.21:0,4,17	0/1:18,2:20:22.18:22,0,502	0/0:16,0:16:32.99:0,33,362	0/0:13,0:22:14.75:0,15,112	0/0:11,0:18:15.01:0,15,152
chr10	101308110	.	GA	G	2706.16	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.277;DP=648;FS=14.122;HRun=1;HaplotypeScore=67.2041;InbreedingCoeff=0.9995;MQ=79.59;MQ0=0;MQRankSum=-1.631;QD=38.11;ReadPosRankSum=2.630;VQSLOD=2.9761;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.33:0,96,1529	0/0:9,0:9:27.09:0,27,429	0/0:20,0:20:60.20:0,60,960	0/0:15,0:15:45.15:0,45,701	0/0:32,0:32:96.31:0,96,1512	0/0:23,0:23:69.24:0,69,1101	0/0:18,0:18:54.17:0,54,838	0/0:39,0:39:99:0,114,1822	0/0:16,0:16:48.16:0,48,765	0/0:24,0:24:72.25:0,72,1150	0/0:25,0:25:75.26:0,75,1199	1/1:0,21:21:60.20:837,60,0	1/1:0,31:31:93.31:1299,93,0	1/1:0,19:19:51.17:713,51,0	0/0:25,0:25:75.26:0,75,1195	0/0:22,0:22:66.21:0,66,1032	0/0:12,0:12:36.10:0,36,550	0/0:12,0:12:36.12:0,36,573	0/0:29,0:29:87.30:0,87,1384	0/0:32,0:32:96.31:0,96,1510	0/0:23,0:23:69.24:0,69,1103	0/0:18,0:18:54.17:0,54,834	0/0:16,0:16:48.16:0,48,767	0/0:28,0:28:84.29:0,84,1340	0/0:31,0:31:93.30:0,93,1441	0/0:24,0:24:72.21:0,72,1123	0/0:37,0:37:99:0,111,1748	0/0:15,0:15:45.15:0,45,720
chr10	101310132	.	CT	C	2917.68	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=17.830;DP=775;FS=0.954;HRun=7;HaplotypeScore=115.6650;InbreedingCoeff=0.9897;MQ=76.13;MQ0=1;MQRankSum=-0.829;QD=11.49;ReadPosRankSum=2.717;VQSLOD=2.2208;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:49,0:49:82.41:379,82,0	0/0:11,0:11:30.08:0,30,364	0/0:36,0:34:68.50:0,68,938	0/0:23,0:22:33.07:0,33,390	0/0:29,0:29:75.22:0,75,929	0/0:33,0:32:87.26:0,87,1079	0/0:28,0:28:78.25:0,78,981	0/0:42,0:42:99:0,99,1171	1/1:26,0:26:8.52:152,9,0	0/0:34,0:34:81.69:0,82,1058	0/0:18,0:18:51.16:0,51,642	1/1:1,21:22:60.14:612,60,0	1/1:5,24:29:57.12:581,57,0	1/1:1,23:24:54.12:551,54,0	0/0:25,0:25:72.22:0,72,895	1/1:19,0:19:40.24:148,40,0	0/0:28,0:28:81.19:0,81,975	0/0:21,0:21:54.09:0,54,642	0/0:21,0:21:54.13:0,54,639	0/0:41,0:41:99:0,120,1447	0/0:28,0:28:81.25:0,81,1007	1/1:24,0:24:38.21:221,38,0	1/1:30,0:30:43.66:237,44,0	1/1:31,0:31:64.98:251,65,0	0/0:19,0:18:51.14:0,51,617	0/0:33,0:33:96.26:0,96,1153	0/0:34,0:33:90.29:0,90,1132	0/0:17,0:17:51.16:0,51,635
chr10	101310139	.	TC	T	5590.96	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=17.106;DP=774;FS=0.609;HRun=4;HaplotypeScore=108.9862;InbreedingCoeff=0.8251;MQ=74.35;MQ0=1;MQRankSum=-5.802;QD=21.93;ReadPosRankSum=4.490;VQSLOD=3.5380;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,48:49:99:1435,120,0	0/0:11,0:11:30.10:0,30,409	0/0:35,0:34:90.69:0,91,1153	0/0:23,0:22:43.77:0,44,520	0/0:28,0:28:84.23:0,84,1094	0/0:30,0:29:87.27:0,87,1158	0/0:26,0:26:78.26:0,78,1065	0/0:38,0:38:93.27:0,93,1187	1/1:1,22:23:60.18:717,60,0	0/0:31,1:32:51.29:0,51,1083	0/0:20,0:20:60.14:0,60,768	0/1:24,0:24:28.11:72,0,28	1/1:24,0:24:35.60:99,36,0	0/1:26,0:26:34.53:54,0,35	0/0:26,0:26:75.22:0,75,992	1/1:0,22:22:48.15:574,48,0	0/0:31,0:31:76.59:0,77,1049	0/0:21,0:21:60.01:0,60,735	0/0:18,0:18:54.16:0,54,704	0/0:40,0:40:99:0,117,1547	0/0:31,0:31:90.19:0,90,1154	1/1:0,25:25:72.08:809,72,0	1/1:1,29:30:78.24:933,78,0	1/1:0,32:32:75.23:897,75,0	0/0:20,0:19:54.15:0,54,692	0/0:34,0:34:99:0,99,1310	0/0:36,0:35:99:0,108,1377	0/0:18,0:18:54.14:0,54,688
chr10	101311734	.	TG	T	3515.97	PASS	AB=0.931;AC=41;AF=0.732;AN=56;BaseQRankSum=2.677;DP=560;FS=7.438;HRun=11;HaplotypeScore=79.9873;InbreedingCoeff=0.6454;MQ=71.41;MQ0=0;MQRankSum=-0.904;QD=7.90;ReadPosRankSum=5.358;VQSLOD=1.9980;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:39:4.14:17,4,0	1/1:4,4:8:8.98:74,9,0	0/0:19,0:19:1.80:0,2,158	0/0:17,0:16:13.81:0,14,154	0/0:19,0:19:9.01:0,9,89	0/0:19,1:20:27.06:0,27,282	0/1:29,2:31:1.19:1,0,388	1/1:12,14:29:38.85:283,39,0	1/1:15,0:15:12.02:67,12,0	0/1:16,1:17:18.16:18,0,27	0/0:13,0:13:15.02:0,15,146	1/1:4,0:20:28.51:82,29,0	1/1:1,0:26:50.93:147,51,0	1/1:4,14:20:37.03:283,37,0	1/1:8,18:26:59.92:492,60,0	1/1:13,0:13:7.92:31,8,0	0/1:27,3:30:4.13:4,0,339	1/1:8,14:22:22.56:279,23,0	1/1:3,13:17:37.97:301,38,0	1/1:6,12:18:35.86:288,36,0	1/1:5,13:19:37.97:301,38,0	1/1:15,0:15:17.58:92,18,0	1/1:15,0:15:6.12:47,6,0	1/1:23,0:23:1.93:81,2,0	0/0:26,0:26:27.03:0,27,265	1/1:8,7:15:26:203,26,0	1/1:5,15:21:40.98:326,41,0	1/1:2,4:6:11.97:98,12,0
chr10	101311744	.	GGA	G	1651.19	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=5.951;DP=515;FS=19.870;HRun=0;HaplotypeScore=86.5743;InbreedingCoeff=0.8149;MQ=72.06;MQ0=0;MQRankSum=-2.619;QD=10.26;ReadPosRankSum=5.098;VQSLOD=1.8260;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,25:34:53.96:674,54,0	0/0:10,0:10:26.47:0,26,184	0/0:22,0:21:3.87:0,4,534	0/0:18,0:17:21.38:0,21,475	0/0:15,0:15:36.05:0,36,450	0/0:12,0:12:33.10:0,33,523	0/0:26,0:26:71.71:0,72,1005	0/0:24,0:24:36.78:0,37,326	1/1:16,1:17:11.85:71,12,0	0/0:13,0:13:38.95:0,39,391	0/0:9,0:9:26.42:0,26,329	0/1:18,0:18:8.60:95,0,9	1/1:26,0:26:43.40:271,43,0	0/0:22,0:22:34.87:0,35,308	0/0:28,0:28:78.16:0,78,496	1/1:11,4:16:46.99:488,47,0	0/0:22,0:22:63.01:0,63,936	0/0:18,0:18:41.19:0,41,246	0/0:21,0:21:30.08:0,30,334	0/0:17,0:17:45.78:0,46,281	0/0:18,0:18:41.60:0,42,292	1/1:15,1:16:21.12:122,21,0	1/1:11,0:11:12.09:81,12,0	0/1:23,0:23:2.14:36,0,2	0/0:19,0:19:51.09:0,51,717	0/0:16,0:16:20.67:0,21,262	0/0:19,0:19:43.63:0,44,309	0/0:5,0:5:11.12:0,11,55
chr10	101312173	.	AT	A	15081.26	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=16.011;DP=658;FS=7.285;HRun=2;HaplotypeScore=92.9441;InbreedingCoeff=0.9999;MQ=92.93;MQ0=0;MQRankSum=-7.557;QD=36.08;ReadPosRankSum=3.753;VQSLOD=5.1545;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:63.20:818,63,0	1/1:1,10:11:30.10:390,30,0	0/0:39,0:39:99:0,117,1640	0/0:32,0:32:72.71:0,73,1228	0/0:23,0:23:69.22:0,69,1014	0/0:25,0:25:75.24:0,75,1104	0/0:19,0:19:57.17:0,57,832	1/1:2,19:21:57.18:740,57,0	1/1:0,22:22:60.20:779,60,0	0/0:29,0:29:84.28:0,84,1258	0/0:26,0:26:78.26:0,78,1168	1/1:0,13:13:39.13:506,39,0	1/1:0,27:27:72.23:935,72,0	1/1:0,28:28:84.27:1091,84,0	1/1:0,23:23:66.20:857,66,0	1/1:0,21:21:60.20:779,60,0	0/0:18,0:18:48.15:0,48,691	1/1:0,23:23:66.21:857,66,0	1/1:1,22:23:66.13:793,66,0	1/1:0,24:24:66.17:838,66,0	1/1:1,24:25:66.05:832,66,0	1/1:0,21:21:57.19:740,57,0	1/1:0,31:31:84.27:1091,84,0	1/1:1,20:21:60.19:779,60,0	0/0:29,0:29:87.29:0,87,1284	1/1:0,23:23:66.21:857,66,0	1/1:0,24:24:69.22:896,69,0	1/1:0,14:14:39.13:506,39,0
chr10	101312485	.	T	TA	8776.98	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-17.110;DP=627;FS=3.126;HRun=1;HaplotypeScore=55.0370;InbreedingCoeff=0.9986;MQ=84.12;MQ0=0;MQRankSum=-4.033;QD=40.63;ReadPosRankSum=0.318;VQSLOD=5.2974;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.19:0,60,779	0/0:10,0:10:30.10:0,30,389	0/0:21,0:22:61.43:0,61,761	0/0:20,0:20:57.14:0,57,681	0/0:29,0:29:87.25:0,87,1098	0/0:21,0:21:60.17:0,60,749	0/0:15,0:15:45.15:0,45,584	1/1:1,33:34:99:1482,99,0	0/0:22,0:22:66.21:0,66,856	0/0:36,0:36:99:0,102,1313	0/0:26,0:26:78.22:0,78,982	0/0:21,0:21:63.20:0,63,818	0/0:19,0:19:57.19:0,57,740	0/0:26,0:26:78.25:0,78,1013	1/1:3,15:18:42.14:630,42,0	0/0:22,0:22:66.21:0,66,856	0/0:13,0:13:36.12:0,36,467	1/1:0,25:25:66.22:989,66,0	1/1:1,20:21:60.20:894,60,0	1/1:2,30:32:90.26:1324,90,0	1/1:0,7:7:18.06:270,18,0	0/0:16,0:16:48.16:0,48,623	0/0:30,0:30:90.29:0,90,1168	0/0:14,0:14:42.09:0,42,526	0/0:26,0:26:78.25:0,78,1013	1/1:0,19:19:57.18:831,57,0	1/1:0,32:32:90.30:1349,90,0	1/1:1,27:28:69.19:1009,69,0
chr10	101314459	.	GAC	G	3803.38	PASS	AB=0.917;AC=35;AF=0.673;AN=52;BaseQRankSum=8.388;DP=590;FS=5.986;HRun=0;HaplotypeScore=95.3747;InbreedingCoeff=0.5108;MQ=59.07;MQ0=16;MQRankSum=1.297;QD=8.41;ReadPosRankSum=1.630;VQSLOD=3.0363;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:31:22.73:111,23,0	0/0:8,0:8:5.99:0,6,50	./.	./.	0/0:19,0:19:27.05:0,27,362	0/1:18,0:18:24.24:24,0,233	0/0:14,0:14:18.01:0,18,225	1/1:33,6:39:14.92:130,15,0	1/1:9,0:15:7.59:34,8,0	0/0:19,0:18:17.85:0,18,165	0/0:18,0:18:16.90:0,17,232	0/0:7,0:15:12:0,12,108	0/1:8,1:17:9.16:9,0,175	1/1:7,12:20:32.55:345,33,0	1/1:5,9:14:24.06:265,24,0	1/1:3,0:21:39.77:195,40,0	0/1:22,3:25:21.20:21,0,497	1/1:17,11:30:50.52:493,51,0	0/1:18,1:20:18.93:61,0,19	1/1:11,15:27:29.99:400,30,0	1/1:3,13:18:35.76:359,36,0	1/1:9,0:10:8.32:38,8,0	1/1:11,0:18:11.36:56,11,0	1/1:4,0:10:11.36:56,11,0	0/1:27,5:32:78.45:78,0,553	1/1:10,11:23:32.75:326,33,0	1/1:18,18:36:50.80:525,51,0	1/1:16,7:23:26.81:275,27,0
chr10	101314463	.	C	CACACACAT	1450.34	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-7.475;DP=604;FS=2.884;HRun=0;HaplotypeScore=172.8294;InbreedingCoeff=-0.1219;MQ=58.47;MQ0=21;MQRankSum=-1.031;QD=5.22;ReadPosRankSum=-2.920;VQSLOD=1.8128;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:35.90:0,36,569	1/1:2,7:9:6.02:257,6,0	0/0:29,0:16:35.99:0,36,326	0/0:24,0:5:8.99:0,9,78	0/0:20,0:20:53.72:0,54,790	0/0:21,0:21:53.97:0,54,693	0/0:16,0:16:36.01:0,36,495	0/1:39,0:39:28.90:502,0,29	0/0:14,0:14:24.32:0,24,266	0/0:19,0:18:48.50:0,48,516	0/0:18,0:18:32.90:0,33,514	0/1:18,0:18:9.65:10,0,101	0/1:17,0:17:24.23:24,0,218	0/0:20,0:20:39.36:0,39,725	0/1:15,0:15:56.90:57,0,245	0/0:22,0:21:48.10:0,48,847	0/0:26,0:25:26.77:0,27,1054	0/1:31,0:31:99:135,0,535	0/1:19,0:19:99:164,0,153	0/1:25,0:25:82.83:83,0,388	0/1:21,0:21:2.09:2,0,367	0/0:9,0:8:15.47:0,15,164	0/0:15,0:15:20.98:0,21,289	0/0:11,0:10:18.03:0,18,290	0/0:31,0:31:68.52:0,69,1385	0/1:25,0:25:99:193,0,343	0/1:36,0:35:99:128,0,560	0/1:23,0:23:47.39:47,0,338
chr10	101314969	.	A	AT	7214.15	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=3.387;DP=725;FS=4.093;HRun=7;HaplotypeScore=87.5885;InbreedingCoeff=0.9986;MQ=80.76;MQ0=0;MQRankSum=-0.731;QD=29.21;ReadPosRankSum=3.899;VQSLOD=5.2031;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,40:42:99:1232,102,0	1/1:1,6:7:18.06:217,18,0	0/0:16,0:16:35.92:0,36,329	0/0:21,0:21:27.77:0,28,292	0/0:38,0:38:99:0,99,945	0/0:30,0:30:81.13:0,81,781	0/0:25,0:25:54.04:0,54,511	0/0:37,0:37:84.11:0,84,807	1/1:3,22:25:66.20:797,66,0	0/0:39,0:39:99:0,102,982	0/0:14,0:14:39.06:0,39,377	1/1:1,22:23:63.19:761,63,0	1/1:0,26:26:75.23:906,75,0	1/1:4,21:25:51.16:616,51,0	0/0:35,0:35:99:0,99,939	1/1:5,15:20:39.12:471,39,0	0/0:27,0:27:78.09:0,78,741	0/0:24,0:24:72.09:0,72,687	0/0:27,0:27:72.09:0,72,687	0/0:23,0:23:60.06:0,60,568	0/0:16,0:16:39.06:0,39,376	1/1:2,29:31:72.22:870,72,0	1/1:4,27:31:49.26:873,49,0	1/1:1,16:17:39.12:471,39,0	0/0:23,0:23:66.11:0,66,637	0/0:23,0:23:66.10:0,66,633	0/0:30,0:30:81.13:0,81,782	0/0:30,0:30:87.03:0,87,827
chr10	101316122	.	CTA	C	429.88	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.590;DP=696;FS=5.253;HRun=0;HaplotypeScore=89.2474;InbreedingCoeff=0.9996;MQ=91.47;MQ0=0;MQRankSum=-7.417;QD=15.92;ReadPosRankSum=1.466;VQSLOD=3.4864;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,151,2954	1/1:1,11:12:33.41:272,33,0	0/0:26,0:26:78.21:0,78,1386	0/0:30,0:30:73.58:0,74,1482	0/0:17,0:17:51.17:0,51,1010	0/0:18,0:18:54.18:0,54,1074	0/0:26,0:26:78.27:0,78,1516	0/0:38,0:38:99:0,114,2175	0/0:26,0:26:78.27:0,78,1561	0/0:22,0:22:66.23:0,66,1297	0/0:21,0:21:63.21:0,63,1215	0/0:28,0:28:84.29:0,84,1616	0/0:27,0:27:81.28:0,81,1644	1/1:3,12:15:31.22:279,31,0	0/0:22,0:22:66.23:0,66,1317	0/0:23,0:23:69.22:0,69,1338	0/0:30,0:30:90.31:0,90,1826	0/0:22,0:22:66.22:0,66,1294	0/0:13,0:13:39.13:0,39,748	0/0:23,0:23:69.24:0,69,1339	0/0:28,0:28:84.27:0,84,1596	0/0:19,0:19:57.19:0,57,1112	0/0:22,0:22:63.22:0,63,1241	0/0:35,0:35:99:0,105,2088	0/0:18,0:18:54.18:0,54,1026	0/0:35,0:35:99:0,102,1950	0/0:33,0:33:99:0,99,1989	0/0:17,0:17:51.17:0,51,1009
chr10	101316125	.	CTACT	C	767.77	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.566;DP=692;FS=7.928;HRun=0;HaplotypeScore=116.9943;InbreedingCoeff=0.9901;MQ=89.70;MQ0=0;MQRankSum=-7.343;QD=28.44;ReadPosRankSum=1.265;VQSLOD=3.3913;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,154,4187	1/1:2,11:13:14.25:407,14,0	0/0:25,0:25:75.24:0,75,1913	0/0:27,0:27:77.48:0,77,2064	0/0:17,0:17:48.16:0,48,1374	0/0:18,0:18:54.19:0,54,1520	0/0:24,0:24:72.23:0,72,2009	0/0:37,0:37:99:0,111,2945	0/0:27,0:27:81.28:0,81,2248	0/0:22,0:22:66.23:0,66,1834	0/0:22,0:22:66.23:0,66,1744	0/0:28,0:28:81.26:0,81,2190	0/0:27,0:27:81.28:0,81,2308	1/1:2,12:14:40.67:478,41,0	0/0:22,0:22:66.21:0,66,1836	0/0:22,0:22:66.23:0,66,1897	0/0:30,0:30:90.31:0,90,2591	0/0:22,0:22:66.23:0,66,1832	0/0:13,0:13:39.13:0,39,1053	0/0:24,0:24:72.25:0,72,1947	0/0:29,0:29:87.30:0,87,2269	0/0:22,0:22:66.23:0,66,1694	0/0:21,0:21:60.21:0,60,1709	0/0:36,0:36:99:0,108,3008	0/0:18,0:18:54.19:0,54,1416	0/0:31,0:31:90.24:0,90,2569	0/0:33,0:33:99:0,99,2800	0/0:17,0:17:51.18:0,51,1422
chr10	101317117	.	AT	A	141.69	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=5.071;DP=414;FS=1.327;HRun=8;HaplotypeScore=37.8342;InbreedingCoeff=0.8779;MQ=61.42;MQ0=0;MQRankSum=-3.065;QD=11.81;ReadPosRankSum=-1.023;VQSLOD=1.6019;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.16:0,60,703	1/1:1,4:5:12.01:116,12,0	0/0:5,0:5:11.87:0,12,118	./.	0/0:26,0:26:69.20:0,69,824	0/0:9,0:9:24.04:0,24,264	0/0:14,0:14:42.13:0,42,507	0/0:23,0:23:66.19:0,66,780	0/0:11,0:11:24.07:0,24,290	0/0:21,0:21:63.19:0,63,751	0/0:26,0:26:75.23:0,75,906	0/0:12,0:12:30.02:0,30,344	0/0:23,0:23:63.19:0,63,759	1/1:3,4:7:15:138,15,0	0/0:15,0:15:42.13:0,42,507	0/0:7,0:7:21.06:0,21,254	0/0:23,0:23:66.19:0,66,786	0/0:13,0:13:33.06:0,33,379	0/0:15,0:15:42.12:0,42,497	0/0:35,0:35:99:0,99,1169	0/0:3,0:3:9.03:0,9,109	0/0:8,0:8:24.06:0,24,278	0/0:17,0:17:51.16:0,51,614	0/0:2,0:2:6.02:0,6,72	0/0:17,0:17:48.15:0,48,580	0/0:19,0:19:57.16:0,57,669	0/0:14,0:15:39.12:0,39,471	0/0:21,0:21:48.15:0,48,580
chr10	101317131	.	T	TAA	395.49	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=4.720;DP=437;FS=1.091;HRun=5;HaplotypeScore=48.8703;InbreedingCoeff=0.7461;MQ=64.21;MQ0=0;MQRankSum=-4.158;QD=17.98;ReadPosRankSum=-2.911;VQSLOD=-0.6380;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.16:0,60,747	1/1:1,4:5:15.05:249,15,0	0/1:7,0:7:7.98:8,0,165	0/1:2,0:2:0:0,0,0	0/0:21,0:21:60.19:0,60,765	0/0:11,0:11:30.09:0,30,382	0/0:12,0:12:30.09:0,30,382	0/0:22,0:22:63.20:0,63,803	0/0:15,0:15:45.11:0,45,545	0/0:25,0:25:63.18:0,63,787	0/0:29,0:29:81.26:0,81,1032	0/0:13,0:13:36.11:0,36,456	0/0:23,0:23:66.21:0,66,840	1/1:3,5:8:18.01:259,18,0	0/0:15,0:15:39.12:0,39,497	0/0:8,0:8:18.05:0,18,229	0/0:25,0:25:72.21:0,72,902	0/0:13,0:13:30.10:0,30,382	0/0:16,0:16:48.15:0,48,611	0/0:35,0:35:99:0,99,1248	0/0:11,0:11:30.04:0,30,351	0/0:10,0:10:27.09:0,27,344	0/0:17,0:17:48.14:0,48,598	0/0:5,0:5:12.02:0,12,138	0/0:16,0:16:45.14:0,45,574	0/0:18,0:18:51.16:0,51,649	0/0:14,0:14:36.12:0,36,459	0/0:18,0:18:51.13:0,51,634
chr10	101317326	.	C	CG	261.67	PASS	AB=0.969;AC=6;AF=0.107;AN=56;BaseQRankSum=5.823;DP=430;FS=2.695;HRun=1;HaplotypeScore=78.0341;InbreedingCoeff=0.5618;MQ=42.81;MQ0=19;MQRankSum=-4.430;QD=5.34;ReadPosRankSum=0.390;VQSLOD=0.4181;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:62.80:0,63,610	1/1:6,1:7:17.50:122,17,0	0/0:21,0:8:11.04:0,11,155	0/0:23,0:3:9:0,9,96	0/0:23,0:23:53.91:0,54,601	0/0:11,0:11:30.10:0,30,387	0/0:18,0:18:45.09:0,45,543	0/0:24,0:22:62.23:0,62,701	0/0:11,0:11:27.02:0,27,301	0/0:14,0:13:32.77:0,33,389	0/0:8,0:8:21.07:0,21,271	0/1:14,1:15:28.44:28,0,42	0/1:14,0:14:1.96:2,0,86	1/1:10,3:13:34.80:237,35,0	0/0:4,0:4:8.51:0,9,86	0/0:17,0:17:35.99:0,36,345	0/0:35,0:35:99:0,102,1203	0/0:16,0:16:44.34:0,44,427	0/0:25,0:21:54.29:0,54,472	0/0:18,0:17:37.01:0,37,278	0/0:7,0:7:12.02:0,12,126	0/0:3,0:3:8.98:0,9,89	0/0:7,0:7:14.90:0,15,114	0/0:13,0:12:15.95:0,16,207	0/0:14,0:14:32.98:0,33,424	0/0:18,0:18:51.15:0,51,386	0/0:21,0:21:36.55:0,37,237	0/0:2,0:2:3.01:0,3,39
chr10	101317331	.	A	AAAAAAG	9201.79	PASS	AB=0.600;AC=33;AF=0.589;AN=56;BaseQRankSum=-3.435;DP=489;FS=10.195;HRun=0;HaplotypeScore=99.7728;InbreedingCoeff=0.7994;MQ=45.31;MQ0=16;MQRankSum=-7.367;QD=32.29;ReadPosRankSum=-2.456;VQSLOD=2.9508;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:33.03:775,33,0	0/0:11,0:11:15.05:0,15,208	0/0:23,0:9:11.31:0,11,146	0/0:25,0:5:9.03:0,9,125	0/0:22,0:22:43.37:0,43,844	0/0:11,0:11:30.09:0,30,561	0/0:19,0:19:27.97:0,28,517	1/1:17,8:33:51.05:1130,51,0	1/1:12,0:12:9.03:237,9,0	0/0:19,0:18:45.12:0,45,753	0/0:10,0:10:24.08:0,24,455	1/1:2,1:19:27.09:714,27,0	1/1:2,1:20:21.07:539,21,0	0/0:13,0:13:27.09:0,27,374	1/1:2,2:6:3.01:96,3,0	1/1:16,0:16:24.55:634,25,0	0/0:35,0:35:87.26:0,87,1656	1/1:12,6:18:13.64:306,14,0	1/1:11,10:28:51.10:1218,51,0	1/1:5,14:22:39.02:1007,39,0	1/1:4,4:8:3.01:96,3,0	1/1:3,0:3:6.02:140,6,0	1/1:7,0:7:9.03:233,9,0	1/1:14,0:13:11.95:238,12,0	0/0:16,0:16:29.81:0,30,523	0/1:7,9:21:76.97:932,0,77	1/1:9,11:22:26.77:852,27,0	1/1:2,0:6:3.01:52,3,0
chr10	101317332	.	AAAAAG	A	769.05	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.900;DP=488;FS=0.908;HRun=0;HaplotypeScore=108.4981;InbreedingCoeff=0.8129;MQ=45.56;MQ0=16;MQRankSum=-4.719;QD=32.04;ReadPosRankSum=0.990;VQSLOD=3.2854;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:48.07:0,48,963	1/1:1,10:11:20.99:332,21,0	0/0:23,0:9:27.01:0,27,415	0/0:24,0:5:12.03:0,12,203	0/0:20,0:20:48.03:0,48,1293	0/0:11,0:11:30.10:0,30,869	0/0:18,0:18:44.98:0,45,924	0/0:35,0:33:96.20:0,96,1857	0/0:12,0:12:27.06:0,27,539	0/0:20,0:19:54.16:0,54,1329	0/0:10,0:10:27.09:0,27,723	0/0:19,0:19:30:0,30,533	0/0:19,0:19:21.07:0,21,406	1/1:4,9:13:32.91:557,33,0	0/0:6,0:6:9.03:0,9,230	0/0:16,0:16:33.92:0,34,735	0/0:35,0:35:99:0,99,2594	0/0:19,0:18:36.07:0,36,679	0/0:28,0:27:75.18:0,75,1453	0/0:24,0:23:51.15:0,51,1077	0/0:8,0:8:9.01:0,9,113	0/0:3,0:3:6.02:0,6,168	0/0:7,0:7:9.02:0,9,223	0/0:14,0:13:24.03:0,24,421	0/0:19,0:19:48.11:0,48,1037	0/0:21,0:21:54.16:0,54,1201	0/0:22,0:22:36.08:0,36,666	0/0:6,0:6:6.02:0,6,113
chr10	101317349	.	G	GAAAAAGA	7777.12	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=4.141;DP=502;FS=1.884;HRun=0;HaplotypeScore=111.1174;InbreedingCoeff=0.2681;MQ=59.02;MQ0=0;MQRankSum=-10.986;QD=27.38;ReadPosRankSum=3.832;VQSLOD=4.3423;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,26:34:36.04:1111,36,0	0/0:10,0:10:18.06:0,18,364	0/0:16,0:13:32.10:0,32,459	0/0:19,0:11:27.05:0,27,338	0/0:26,0:26:66.46:0,66,1302	0/0:13,0:13:36.10:0,36,733	0/0:14,0:14:36.11:0,36,741	0/1:27,0:26:99:353,0,132	1/1:5,7:12:15.05:560,15,0	0/0:24,0:24:72.20:0,72,1300	0/0:12,0:12:29.21:0,29,639	1/1:16,0:16:4.47:506,4,0	0/1:18,0:18:30.53:338,0,31	0/0:16,0:16:39.11:0,39,735	0/1:8,0:8:42.91:206,0,43	1/1:1,16:17:24.08:922,24,0	0/0:35,0:35:99:0,102,2199	0/1:17,0:16:44.05:450,0,44	0/1:25,0:24:44.44:493,0,44	0/1:25,0:25:99:647,0,103	0/1:11,0:11:51.69:52,0,101	1/1:0,8:9:15.05:286,15,0	1/1:1,5:6:12.04:362,12,0	1/1:2,11:15:12.04:317,12,0	0/0:20,0:20:50.92:0,51,869	0/1:20,0:20:99:635,0,171	0/1:24,0:23:99:541,0,180	0/0:13,0:13:0.69:0,1,179
chr10	101317558	.	C	CA	1174.82	PASS	AB=0.571;AC=3;AF=0.054;AN=56;BaseQRankSum=8.127;DP=675;FS=5.994;HRun=0;HaplotypeScore=67.2199;InbreedingCoeff=0.6445;MQ=96.45;MQ0=0;MQRankSum=-3.993;QD=36.71;ReadPosRankSum=2.093;VQSLOD=3.6614;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.23:0,69,962	0/1:1,3:4:29.82:132,0,30	0/0:35,0:35:92.26:0,92,1176	0/0:36,0:36:93.25:0,93,1215	0/0:37,0:37:99:0,105,1463	0/0:29,0:29:84.18:0,84,1110	0/0:8,0:8:24.08:0,24,335	0/0:27,0:27:81.15:0,81,1053	0/0:19,0:19:51.17:0,51,710	0/0:33,0:33:99:0,99,1315	0/0:25,0:25:75.25:0,75,1043	0/0:26,0:26:75.22:0,75,1020	0/0:29,0:29:87.21:0,87,1136	1/1:0,28:28:72.25:1149,72,0	0/0:28,0:28:78.23:0,78,1065	0/0:23,0:23:69.22:0,69,945	0/0:22,0:22:60.10:0,60,792	0/0:9,0:9:24.08:0,24,334	0/0:22,0:22:63.14:0,63,834	0/0:34,0:34:99:0,99,1295	0/0:18,0:18:51.15:0,51,679	0/0:23,0:23:63.04:0,63,850	0/0:19,0:19:51.17:0,51,711	0/0:18,0:18:42.12:0,42,568	0/0:7,0:7:21.07:0,21,293	0/0:37,0:36:99:0,108,1473	0/0:35,0:35:99:0,102,1385	0/0:19,0:19:54.18:0,54,753
chr10	101317920	.	AGAT	A	391.70	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=9.759;DP=611;FS=5.154;HRun=0;HaplotypeScore=145.8878;InbreedingCoeff=0.4703;MQ=58.29;MQ0=6;MQRankSum=-5.495;QD=4.50;ReadPosRankSum=-3.114;VQSLOD=1.4012;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:26:2.93:3,0,471	1/1:9,0:9:15:202,15,0	0/0:15,0:7:18.92:0,19,202	0/0:14,0:8:12.26:0,12,105	0/0:34,0:34:41.37:0,41,789	0/0:17,0:16:51.15:0,51,804	0/0:17,0:17:42.07:0,42,581	0/0:46,0:43:99:0,120,1602	0/0:26,0:26:66.22:0,66,1098	0/0:35,0:34:96.32:0,96,1636	0/0:31,0:31:87.29:0,87,1479	0/0:24,0:23:39.09:0,39,713	0/0:19,2:20:48.07:0,48,665	1/1:13,2:15:15.03:233,15,0	0/0:13,0:13:11.44:0,11,278	0/0:19,1:19:36.09:0,36,495	0/0:28,0:26:44.50:0,45,835	0/1:17,0:15:68.95:69,0,337	0/1:18,0:18:17.21:17,0,446	0/0:36,0:34:47.15:0,47,896	0/0:14,0:12:8.67:0,9,233	0/0:16,0:13:26.40:0,26,312	0/0:26,0:24:53.08:0,53,610	0/0:12,0:11:20.72:0,21,264	0/0:18,0:18:48.14:0,48,788	0/0:27,0:25:34.33:0,34,677	0/0:25,0:24:15.45:0,15,407	0/0:9,0:8:3.18:0,3,80
chr10	101317923	.	T	TA	320.35	PASS	AB=0.909;AC=6;AF=0.107;AN=56;BaseQRankSum=6.803;DP=612;FS=1.998;HRun=1;HaplotypeScore=137.1568;InbreedingCoeff=0.5288;MQ=58.00;MQ0=7;MQRankSum=-1.556;QD=5.17;ReadPosRankSum=-1.753;VQSLOD=-0.2134;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,1:29:33.24:0,33,423	1/1:1,8:10:4.68:135,5,0	0/0:15,0:7:19.50:0,20,185	0/0:13,0:8:12:0,12,97	0/0:20,0:33:83.67:0,84,1012	0/0:18,0:17:54.12:0,54,715	0/0:16,0:16:41.97:0,42,524	0/0:45,0:41:99:0,120,1605	0/0:26,0:26:66.22:0,66,923	0/0:34,0:33:96.32:0,96,1341	0/0:29,0:29:87.29:0,87,1217	0/0:24,0:23:39.12:0,39,524	0/0:15,1:21:17.68:0,18,308	1/1:4,12:16:15.03:213,15,0	0/0:7,0:13:33.04:0,33,389	0/0:16,0:18:28.48:0,28,397	0/0:25,2:26:52.03:0,52,715	0/1:13,3:16:57.51:58,0,368	0/1:17,0:18:39.92:40,0,512	0/0:30,1:35:87.11:0,87,1129	0/0:13,0:12:25.03:0,25,303	0/0:14,2:13:26.90:0,27,365	0/0:25,2:24:54.16:0,54,742	0/0:11,1:11:20.99:0,21,290	0/0:17,0:17:48.14:0,48,638	0/0:21,1:27:61.93:0,62,821	0/0:13,0:21:41.74:0,42,530	0/0:5,0:8:9.01:0,9,108
chr10	101317970	.	TA	T	64.63	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.293;DP=581;FS=0.000;HRun=1;HaplotypeScore=185.0598;InbreedingCoeff=0.7924;MQ=49.52;MQ0=13;MQRankSum=-3.864;QD=3.80;ReadPosRankSum=-1.871;VQSLOD=-0.6772;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:25.75:0,26,413	1/1:5,3:8:9.92:123,10,0	0/0:13,0:7:9.97:0,10,180	0/0:12,0:9:22.94:0,23,283	0/0:25,0:25:45.54:0,46,495	0/0:13,0:13:35.98:0,36,551	0/0:13,0:13:32.83:0,33,488	0/0:49,0:40:99:0,117,1667	0/0:16,0:16:32.97:0,33,521	0/0:31,0:30:90.30:0,90,1357	0/0:23,0:23:69.22:0,69,1035	0/0:21,0:20:39.07:0,39,561	0/0:24,0:22:45.13:0,45,560	1/1:3,6:8:3.79:44,4,0	0/0:21,0:16:27.29:0,27,310	0/0:14,0:11:15.47:0,15,173	0/0:31,0:29:33.80:0,34,813	0/0:14,0:10:9.64:0,10,153	0/0:20,0:18:48.49:0,48,626	0/0:48,0:47:39.80:0,40,529	0/0:15,0:13:16.59:0,17,267	0/0:22,2:23:17.72:0,18,198	0/0:26,0:24:38.48:0,38,438	0/0:8,0:7:11.75:0,12,134	0/0:14,0:12:32.78:0,33,511	0/0:26,0:24:54.81:0,55,583	0/0:27,0:25:40.20:0,40,495	0/0:9,0:8:12.51:0,13,177
chr10	101317974	.	TAGAC	T	1523.73	PASS	AB=0.985;AC=21;AF=0.375;AN=56;BaseQRankSum=9.312;DP=599;FS=0.000;HRun=0;HaplotypeScore=210.0284;InbreedingCoeff=-0.1253;MQ=50.26;MQ0=12;MQRankSum=-5.288;QD=3.65;ReadPosRankSum=-1.028;VQSLOD=1.7105;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:61.94:62,0,202	0/1:5,0:7:4.51:81,0,5	0/0:18,0:11:9.47:0,9,153	0/0:13,0:10:15.41:0,15,171	0/1:27,0:27:99:115,0,245	0/0:13,0:13:33.02:0,33,536	0/0:12,0:12:24.02:0,24,381	0/1:53,0:45:2.20:2,0,650	0/0:17,0:17:5.09:0,5,362	0/0:32,0:31:90.17:0,90,1398	0/0:25,0:25:62.99:0,63,916	0/1:22,0:20:62.90:63,0,243	0/1:24,0:22:75.01:75,0,205	0/1:14,0:12:10.65:12,0,11	0/1:22,0:17:99:114,0,114	0/1:14,0:11:30.96:31,0,47	0/0:28,0:26:18.48:0,18,658	0/1:12,0:8:4.52:5,0,46	0/1:20,0:18:56.90:57,0,204	0/1:48,0:47:64.55:65,0,172	0/1:13,0:12:8.94:9,0,83	1/1:19,5:23:14.24:209,14,0	1/1:24,4:26:35.29:461,35,0	1/1:3,3:5:6.01:79,6,0	0/0:15,0:13:36.04:0,36,672	0/1:26,0:24:99:137,0,114	0/1:29,0:27:78.80:114,0,79	0/0:9,0:8:4.19:0,4,79
chr10	101317998	.	G	GATAA	212.90	PASS	AB=0.778;AC=3;AF=0.054;AN=56;BaseQRankSum=5.417;DP=680;FS=24.637;HRun=0;HaplotypeScore=256.4268;InbreedingCoeff=0.5691;MQ=62.65;MQ0=9;MQRankSum=-4.482;QD=10.14;ReadPosRankSum=-3.536;VQSLOD=1.4788;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:31.70:0,32,461	0/1:5,2:7:35.51:124,0,36	0/0:47,0:37:93.03:0,93,1506	0/0:23,0:18:52.29:0,52,764	0/0:28,0:28:78.25:0,78,1435	0/0:22,0:22:51.12:0,51,903	0/0:10,0:10:18.03:0,18,341	0/0:61,0:59:99:0,153,2735	0/0:19,0:19:40.86:0,41,608	0/0:39,0:38:99:0,102,1883	0/0:26,0:26:66.21:0,66,1219	0/0:21,0:19:36.17:0,36,536	0/0:22,0:21:49.24:0,49,683	1/1:8,6:12:19.86:193,20,0	0/0:23,0:17:42.07:0,42,698	0/0:15,0:11:27.56:0,28,367	0/0:21,0:19:51.06:0,51,842	0/0:13,0:10:21.07:0,21,340	0/0:29,0:27:78.23:0,78,1369	0/0:49,0:49:92.49:0,92,1259	0/0:10,0:8:8.97:0,9,171	0/0:27,0:26:47.25:0,47,658	0/0:30,0:29:34.32:0,34,528	0/0:4,0:4:6.02:0,6,114	0/0:16,0:16:42.14:0,42,797	0/0:31,0:26:75.26:0,75,1420	0/0:35,0:33:84.10:0,84,1361	0/0:15,0:15:33:0,33,631
chr10	101318002	.	GACAC	G	1724.23	PASS	AB=0.825;AC=8;AF=0.143;AN=56;BaseQRankSum=4.966;DP=686;FS=42.013;HRun=0;HaplotypeScore=251.9583;InbreedingCoeff=-0.1763;MQ=61.74;MQ0=9;MQRankSum=-4.836;QD=9.85;ReadPosRankSum=-5.572;VQSLOD=0.6466;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,5:21:99:181,0,377	0/0:7,0:7:8.30:0,8,57	0/0:42,0:33:88.76:0,89,1281	0/0:22,0:18:46.52:0,47,473	0/0:30,0:30:80.96:0,81,1842	0/0:23,0:23:53.97:0,54,1261	0/0:8,0:8:20.77:0,21,488	0/0:64,0:62:86.16:0,86,2242	0/1:15,5:20:99:303,0,258	0/0:38,0:37:99:0,107,2533	0/0:24,0:24:69.22:0,69,1854	0/1:15,7:20:99:392,0,374	0/1:19,2:20:99:228,0,484	0/0:14,0:12:4.98:0,5,61	0/0:22,0:16:42.13:0,42,885	0/1:10,5:11:99:141,0,401	0/0:21,0:19:51.16:0,51,1282	0/1:14,0:10:3.36:3,0,260	0/0:30,0:28:51.74:0,52,1223	0/0:49,0:49:62.02:0,62,1717	0/0:11,0:9:8.61:0,9,113	0/1:20,8:28:99:367,0,642	0/1:23,9:31:99:240,0,378	0/0:5,0:5:5.81:0,6,99	0/0:15,0:15:41.76:0,42,871	0/0:33,0:28:80.95:0,81,1270	0/0:33,0:31:78.45:0,78,1496	0/0:17,0:17:34.42:0,34,710
chr10	101318049	.	AATAG	A	1374.21	PASS	AC=12;AF=0.250;AN=48;BaseQRankSum=-1.378;DP=617;FS=4.689;HRun=0;HaplotypeScore=203.1514;InbreedingCoeff=0.7121;MQ=40.78;MQ0=44;MQRankSum=2.599;QD=12.84;ReadPosRankSum=-0.520;VQSLOD=3.2141;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:18:3.18:0,3,51	./.	./.	./.	1/1:13,19:30:39.07:580,39,0	1/1:11,11:21:21.07:326,21,0	./.	0/0:35,0:29:6.01:0,6,67	0/0:14,0:12:12.41:0,12,93	0/0:40,0:40:60.20:0,60,1344	0/0:27,0:27:39.13:0,39,900	0/0:18,0:14:8.46:0,8,101	0/0:24,0:23:42.61:0,43,934	1/1:7,0:6:0.89:2,1,0	0/0:24,0:12:5.39:0,5,23	0/0:22,0:12:7.87:0,8,54	1/1:17,9:24:22.04:425,22,0	0/0:18,0:12:4.70:0,5,26	0/0:27,0:21:8.41:0,8,77	0/0:40,0:31:30.90:0,31,358	1/1:10,0:10:0.08:1,0,0	0/0:27,0:24:9.01:0,9,142	0/0:33,0:31:20:0,20,201	0/0:12,0:11:4.57:0,5,73	1/1:5,5:10:12.04:186,12,0	0/0:35,0:29:39.59:0,40,379	0/0:33,0:32:26.46:0,26,190	0/0:22,0:14:19.60:0,20,108
chr10	101318096	.	GATAT	G	50.18	PASS	AB=0.950;AC=6;AF=0.115;AN=52;BaseQRankSum=5.630;DP=594;FS=4.731;HRun=0;HaplotypeScore=140.8422;InbreedingCoeff=0.1760;MQ=40.46;MQ0=51;MQRankSum=-0.296;QD=0.82;ReadPosRankSum=-4.620;VQSLOD=0.5749;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,8:16:8.75:0,9,188	0/0:3,0:2:6.02:0,6,162	./.	./.	0/0:33,0:31:78.27:0,78,1833	0/0:18,0:17:39.13:0,39,884	0/0:3,0:2:3.01:0,3,81	0/0:37,0:24:72.25:0,72,1898	0/0:9,0:7:15.05:0,15,402	0/0:33,0:31:93.31:0,93,2430	0/0:27,0:27:72.25:0,72,1909	0/0:16,0:8:12.04:0,12,323	0/0:30,1:21:48.16:0,48,1290	1/1:10,0:1:0.89:2,1,0	0/0:22,0:8:9.03:0,9,232	0/0:21,0:10:14.45:0,14,403	0/0:32,3:29:0.67:0,1,1195	0/1:16,2:10:72.25:72,0,302	0/0:16,0:10:24.08:0,24,612	0/0:40,0:26:11:0,11,792	1/1:9,2:8:0.16:1,0,0	0/0:22,0:16:20.95:0,21,566	0/0:22,0:19:21.07:0,21,554	0/0:15,2:12:12.04:0,12,323	0/0:19,0:18:51.18:0,51,1277	0/0:38,0:25:43.39:0,43,1209	0/0:26,0:22:52.27:0,52,1274	0/1:22,0:12:64.47:64,0,220
chr10	101318142	.	G	GTAGATAGA	1551.75	PASS	AB=1.000;AC=30;AF=0.625;AN=48;BaseQRankSum=6.623;DP=527;FS=2.046;HRun=0;HaplotypeScore=135.6591;InbreedingCoeff=0.6347;MQ=42.57;MQ0=38;MQRankSum=-2.254;QD=4.79;ReadPosRankSum=-5.722;VQSLOD=0.4292;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:13:6.26:18,0,6	./.	./.	./.	0/0:33,0:33:69.18:0,69,1490	0/0:21,0:21:48.15:0,48,1069	0/0:8,0:5:9.92:0,10,226	1/1:44,0:27:5.99:49,6,0	1/1:9,0:6:8.59:53,9,0	0/0:33,0:31:63.17:0,63,1466	0/0:32,0:32:69.16:0,69,1455	1/1:8,4:11:20.83:507,21,0	1/1:20,3:11:18.04:348,18,0	./.	1/1:16,0:7:4.67:49,5,0	1/1:13,0:5:2.80:13,3,0	0/0:28,0:23:28.70:0,29,537	1/1:15,0:10:10.01:61,10,0	1/1:10,0:8:11.98:136,12,0	1/1:33,0:25:13.27:105,13,0	0/1:9,0:6:0.03:0,0,0	0/1:15,0:11:0:0,0,0	1/1:11,0:6:8.95:90,9,0	1/1:15,0:10:5.83:37,6,0	0/0:22,0:22:51.16:0,51,1205	0/1:26,0:14:60.66:79,0,61	1/1:27,0:23:23.69:162,24,0	1/1:18,0:8:5.67:16,6,0
chr10	101318150	.	A	AGAT	69.80	PASS	AB=0.930;AC=5;AF=0.100;AN=50;BaseQRankSum=4.290;DP=521;FS=9.861;HRun=0;HaplotypeScore=101.2193;InbreedingCoeff=0.1806;MQ=43.62;MQ0=30;MQRankSum=-4.007;QD=0.98;ReadPosRankSum=-2.642;VQSLOD=0.8289;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,3:12:80.35:80,0,234	0/0:3,0:2:6.02:0,6,112	./.	./.	0/0:34,0:34:96.32:0,96,1756	0/0:22,0:22:63.22:0,63,1156	0/0:9,0:6:12.04:0,12,223	0/0:48,0:26:72.23:0,72,1286	0/0:11,0:8:18.05:0,18,370	0/0:38,0:36:99:0,105,1870	0/0:31,0:31:93.32:0,93,1714	0/0:16,0:14:33.55:0,34,493	0/0:23,0:10:29.73:0,30,451	./.	0/0:18,0:8:15.05:0,15,279	0/0:13,0:5:12.04:0,12,235	0/1:25,0:20:5.54:6,0,886	0/1:14,1:11:52.36:52,0,278	0/0:11,0:9:21.05:0,21,357	0/0:33,0:25:38.99:0,39,716	1/1:7,1:6:3.01:36,3,0	0/0:14,0:10:17.87:0,18,331	0/0:10,0:6:15.04:0,15,259	0/0:11,0:7:8.18:0,8,178	0/0:23,0:22:66.22:0,66,1202	0/0:22,0:12:33.08:0,33,537	0/0:27,0:22:48.11:0,48,785	0/0:15,0:8:12.04:0,12,224
chr10	101318217	.	GATAA	G	4203.15	PASS	AC=16;AF=0.308;AN=52;BaseQRankSum=6.921;DP=600;FS=20.630;HRun=0;HaplotypeScore=151.0440;InbreedingCoeff=0.9101;MQ=50.45;MQ0=7;MQRankSum=2.949;QD=28.02;ReadPosRankSum=4.538;VQSLOD=2.0136;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,7:15:7.85:279,8,0	./.	0/0:7,0:6:2.92:0,3,197	0/0:11,0:5:0.51:0,1,140	0/0:38,0:38:99:0,108,2403	0/0:23,0:23:69.14:0,69,1456	0/0:9,0:8:20.99:0,21,395	0/0:47,0:47:99:0,132,2741	1/1:11,16:23:53.64:1002,54,0	0/0:41,0:41:99:0,120,2924	0/0:44,0:44:99:0,132,3099	1/1:4,15:15:34.68:629,35,0	1/1:6,13:14:31.37:540,31,0	./.	0/0:32,0:23:65.68:0,66,1375	1/1:7,9:10:23.82:376,24,0	0/0:27,0:27:72.12:0,72,1619	0/0:15,0:13:36.02:0,36,781	0/0:13,0:13:39.10:0,39,960	0/0:37,0:36:99:0,106,2097	0/0:9,0:8:19.17:0,19,228	1/1:4,9:12:17.55:355,18,0	1/1:9,14:21:29.81:632,30,0	1/1:5,6:10:20.99:391,21,0	0/0:17,0:17:48.16:0,48,1249	0/0:32,0:27:75.11:0,75,1690	0/0:35,0:29:71.69:0,72,1369	0/0:13,0:11:17.62:0,18,660
chr10	101318250	.	GTAGA	G	1173.97	PASS	AB=0.893;AC=11;AF=0.229;AN=48;BaseQRankSum=3.871;DP=598;FS=0.686;HRun=0;HaplotypeScore=166.5247;InbreedingCoeff=0.2346;MQ=48.51;MQ0=12;MQRankSum=-0.873;QD=5.70;ReadPosRankSum=3.212;VQSLOD=2.6381;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:15:6.91:0,7,107	0/0:3,0:3:2.94:0,3,18	./.	./.	1/1:16,18:36:42.04:629,42,0	0/1:16,1:21:19.19:19,0,478	0/0:8,0:8:6:0,6,95	0/0:36,0:22:3:0,3,38	0/0:21,0:22:8.82:0,9,135	0/0:42,0:42:57.17:0,57,1265	0/0:46,0:46:84.26:0,84,1874	0/0:21,0:16:6:0,6,55	0/0:22,0:20:25.50:0,25,288	./.	0/1:24,0:20:12.09:47,0,12	0/0:17,0:15:17.99:0,18,291	0/0:25,0:24:27.93:0,28,539	0/0:14,0:12:10.05:0,10,59	1/1:11,0:11:6:53,6,0	1/1:21,1:29:21.03:202,21,0	./.	0/0:15,0:14:2.34:0,2,13	0/0:23,0:26:12.02:0,12,177	0/0:13,0:11:2.99:0,3,24	0/0:24,0:24:10.24:0,10,600	0/1:24,0:19:31.05:31,0,61	0/1:25,8:28:14.64:264,0,15	0/1:18,0:21:13.22:75,0,13
chr10	101318327	.	CAGATAGAT	C	636.31	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.169;DP=618;FS=29.718;HRun=0;HaplotypeScore=210.7821;InbreedingCoeff=0.8003;MQ=53.66;MQ0=6;MQRankSum=-5.361;QD=42.42;ReadPosRankSum=-1.123;VQSLOD=1.8415;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:24:31.43:0,31,1707	1/1:1,6:7:0.65:483,1,0	0/0:22,0:19:48.64:0,49,1595	0/0:11,0:10:22.31:0,22,566	0/0:34,0:33:84.28:0,84,3308	0/0:16,0:16:38.46:0,38,1514	0/0:19,0:19:32.99:0,33,1070	0/0:38,0:36:90.30:0,90,3235	0/0:24,0:23:45.15:0,45,1831	0/0:30,0:30:81.28:0,81,3059	0/0:24,0:24:66.18:0,66,2245	0/0:24,0:20:42.14:0,42,1632	0/0:26,0:20:42.61:0,43,1660	1/1:5,3:3:9.03:251,9,0	0/0:21,0:20:45.15:0,45,1652	0/0:22,0:15:36.59:0,37,1260	0/0:14,0:13:30.10:0,30,1077	0/0:13,0:13:14.22:0,14,1299	0/0:24,0:24:66.70:0,67,2690	0/0:37,0:36:87.29:0,87,3535	0/0:10,0:10:24.08:0,24,1051	0/0:13,0:11:27.09:0,27,1150	0/0:26,0:25:63.22:0,63,2415	0/0:11,0:11:14.80:0,15,630	0/0:22,0:22:57.18:0,57,2074	0/0:29,0:26:75.21:0,75,2891	0/0:36,0:32:78.23:0,78,3094	0/0:30,0:27:72.25:0,72,2709
chr10	101318361	.	G	GAC	4960.47	PASS	AB=1.000;AC=19;AF=0.352;AN=54;BaseQRankSum=-2.510;DP=623;FS=5.279;HRun=0;HaplotypeScore=143.4948;InbreedingCoeff=0.8883;MQ=57.88;MQ0=6;MQRankSum=-0.382;QD=24.20;ReadPosRankSum=1.333;VQSLOD=5.8268;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,17:22:35.39:642,35,0	1/1:3,2:8:6.01:93,6,0	0/0:20,0:17:48.09:0,48,642	0/0:19,0:15:33.61:0,34,420	0/0:37,0:35:99:0,99,1509	0/0:15,0:15:45.15:0,45,687	0/0:14,0:15:21.04:0,21,299	0/0:55,0:53:99:0,144,2008	1/1:6,23:26:54.19:1032,54,0	0/0:36,0:34:96.33:0,96,1500	0/0:20,0:20:54.11:0,54,740	1/1:6,15:19:36.04:624,36,0	1/1:5,14:15:26.96:513,27,0	./.	0/0:27,0:27:11.60:0,12,865	1/1:8,9:13:24.08:444,24,0	0/0:13,0:12:27.09:0,27,410	0/0:11,0:10:30.10:0,30,453	0/0:19,0:18:24.78:0,25,681	0/0:38,0:36:75.25:0,75,1173	0/0:10,0:10:15.05:0,15,230	1/1:5,9:10:27.08:464,27,0	1/1:6,17:21:45.14:822,45,0	1/1:4,10:14:14.35:288,14,0	0/0:15,0:15:45.15:0,45,686	0/0:38,0:36:17.17:0,17,1359	0/1:35,0:31:36.95:37,0,832	0/0:26,0:20:57.19:0,57,871
chr10	101318384	.	T	TATAG	1786.94	PASS	AB=0.976;AC=20;AF=0.400;AN=50;BaseQRankSum=-0.174;DP=646;FS=0.000;HRun=0;HaplotypeScore=178.5230;InbreedingCoeff=0.2364;MQ=52.92;MQ0=20;MQRankSum=1.118;QD=4.33;ReadPosRankSum=0.170;VQSLOD=2.6218;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:24:3.63:4,0,20	0/1:6,0:6:0:0,0,0	./.	0/0:17,0:11:0:0,0,0	0/0:34,0:32:48.05:0,48,582	0/0:15,0:15:21.04:0,21,275	0/0:15,0:16:9.01:0,9,114	0/1:55,0:47:0:0,0,0	1/1:32,0:29:14.92:245,15,0	0/1:31,12:40:45.83:662,0,46	0/0:27,0:25:39.05:0,39,485	0/1:17,0:13:0:0,0,0	0/1:16,0:12:0:0,0,0	./.	1/1:29,0:29:5.96:107,6,0	1/1:20,0:18:3.88:55,4,0	0/0:19,0:18:13.86:0,14,186	1/1:14,0:13:11.95:129,12,0	0/1:16,0:13:10.81:11,0,78	0/1:32,0:28:75.45:75,0,216	0/1:9,0:9:0:0,0,0	./.	0/1:17,0:14:15.53:16,0,16	0/0:14,0:14:1.61:0,2,6	0/0:18,0:18:21.07:0,21,320	0/1:44,0:40:1.52:343,0,2	0/0:35,0:27:8.96:0,9,126	0/1:36,0:28:13.21:277,0,13
chr10	101318441	.	A	ATAGG	1219.08	PASS	AB=1.000;AC=11;AF=0.212;AN=52;BaseQRankSum=6.317;DP=587;FS=0.487;HRun=0;HaplotypeScore=162.2334;InbreedingCoeff=-0.1230;MQ=43.41;MQ0=40;MQRankSum=-7.591;QD=4.86;ReadPosRankSum=-1.394;VQSLOD=2.2400;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:25:16.89:0,17,93	0/0:5,0:5:2.89:0,3,19	0/1:15,0:3:7.87:8,0,90	./.	0/0:35,0:34:96.30:0,96,1739	0/0:16,0:16:48.03:0,48,818	0/0:12,0:11:26.90:0,27,471	0/1:30,0:14:42.79:135,0,43	0/1:21,0:17:73.19:108,0,73	0/0:45,0:42:99:0,120,1873	0/0:32,0:31:84.24:0,84,1436	0/0:17,0:9:5.22:0,5,32	0/0:14,0:12:5.96:0,6,45	./.	1/1:25,5:30:38.43:392,38,0	0/0:24,0:19:2.80:0,3,57	0/0:22,0:20:43.75:0,44,693	0/1:9,0:7:19.14:89,0,19	0/1:22,0:17:35.42:160,0,35	0/1:28,0:24:70.17:70,0,90	0/0:7,0:6:2.79:0,3,20	0/0:13,0:10:2.92:0,3,17	0/0:21,0:16:8.65:0,9,95	0/0:12,0:10:5.71:0,6,47	0/0:21,0:21:63.20:0,63,1150	0/1:43,0:36:99:230,0,104	0/1:27,0:18:34.49:139,0,34	0/1:26,0:21:32.51:33,0,84
chr10	101318497	.	GTAGATAGATAGATAGA	G	5506.43	PASS	AB=0.835;AC=7;AF=0.146;AN=48;BaseQRankSum=2.847;DP=662;FS=10.346;HRun=0;HaplotypeScore=325.9486;InbreedingCoeff=-0.1941;MQ=44.42;MQ0=38;MQRankSum=-8.168;QD=28.68;ReadPosRankSum=0.240;VQSLOD=1.8430;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:32:45.08:0,45,2061	./.	./.	./.	0/0:20,0:45:75.17:0,75,2010	0/0:19,0:19:39.12:0,39,2173	0/0:10,0:9:12.04:0,12,533	0/0:45,0:29:1.11:0,1,170	0/0:12,0:14:24.08:0,24,917	0/0:50,0:50:99:0,102,5888	0/0:36,0:36:78.25:0,78,3491	0/0:17,0:14:8.72:0,9,167	0/0:26,0:25:36.51:0,37,876	./.	0/1:24,4:29:99:809,0,101	0/0:17,0:25:57.19:0,57,2245	0/0:24,0:22:45.11:0,45,2062	0/1:12,0:11:99:253,0,402	0/1:13,1:12:61.74:184,0,62	0/1:19,7:29:99:802,0,534	0/0:6,0:6:6.49:0,6,145	0/0:23,0:21:42.14:0,42,2117	0/0:23,0:22:30.11:0,30,1496	0/0:19,0:16:30.24:0,30,1617	0/0:26,0:26:60.21:0,60,2906	0/1:33,5:34:99:1347,0,927	0/1:21,11:31:97.25:1531,0,97	0/1:11,24:33:99:580,0,860
chr10	101318530	.	TA	T	816.15	PASS	AB=0.895;AC=7;AF=0.135;AN=52;BaseQRankSum=7.986;DP=668;FS=8.251;HRun=1;HaplotypeScore=185.0140;InbreedingCoeff=-0.1691;MQ=49.18;MQ0=28;MQRankSum=-6.840;QD=4.16;ReadPosRankSum=0.482;VQSLOD=-0.1748;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:36:65.10:0,65,1029	./.	0/0:7,0:1:2.94:0,3,18	0/0:11,0:3:5.54:0,6,72	0/0:42,0:41:76.76:0,77,746	0/0:15,0:15:45.14:0,45,691	0/0:15,0:13:27.09:0,27,413	0/0:40,0:29:62.85:0,63,1015	0/0:25,0:22:36.67:0,37,414	0/0:43,0:42:99:0,126,1981	0/0:31,0:31:90.29:0,90,1383	0/0:13,0:11:11.07:0,11,132	0/0:24,0:21:38.73:0,39,369	./.	0/1:20,9:28:99:280,0,354	0/0:26,0:26:55.80:0,56,562	0/0:23,1:24:57.15:0,57,859	0/1:12,3:14:79.13:79,0,364	0/1:13,1:7:26.62:27,0,202	0/1:25,5:30:99:225,0,548	0/0:10,0:10:18.04:0,18,250	0/0:30,0:26:69.70:0,70,1051	0/0:23,0:21:45.15:0,45,693	0/0:23,0:20:38.86:0,39,609	0/0:25,0:25:75.25:0,75,1159	0/1:34,3:35:87.56:88,0,1026	0/1:34,2:35:99:227,0,709	0/1:34,0:34:17.78:18,0,389
chr10	101318538	.	TAGATAG	T	1121.01	PASS	AB=1.000;AC=9;AF=0.173;AN=52;BaseQRankSum=7.441;DP=661;FS=28.761;HRun=0;HaplotypeScore=231.6343;InbreedingCoeff=0.2604;MQ=51.97;MQ0=22;MQRankSum=-5.691;QD=6.71;ReadPosRankSum=-0.497;VQSLOD=1.2463;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:37:67.64:0,68,1963	./.	0/0:10,0:3:8.81:0,9,87	0/1:12,0:5:14.18:14,0,109	0/0:39,0:38:65.52:0,66,711	0/0:16,0:16:48.16:0,48,1471	0/0:15,0:13:27.09:0,27,609	0/0:46,0:38:99:0,111,1566	0/0:26,0:23:49.44:0,49,589	0/0:41,0:40:99:0,120,3617	0/0:31,0:31:84.24:0,84,2203	1/1:8,2:9:9.27:194,9,0	1/1:16,7:21:39.37:849,39,0	./.	0/0:29,0:28:4.89:0,5,599	0/0:25,0:25:66.14:0,66,886	0/0:25,0:26:57.19:0,57,1403	0/0:13,0:13:4.44:0,4,515	0/1:14,0:8:7.37:7,0,279	0/0:31,0:31:5.72:0,6,947	0/0:10,0:10:17.97:0,18,256	0/0:29,0:26:66.04:0,66,1733	0/0:18,0:17:35.57:0,36,877	0/0:21,0:20:36.05:0,36,1051	0/0:24,0:24:69.23:0,69,1994	0/1:37,0:36:53.27:53,0,1466	0/1:36,0:36:92.37:92,0,1046	0/1:35,0:35:53.12:53,0,803
chr10	101318542	.	TAG	T	330.58	PASS	AB=1.000;AC=7;AF=0.135;AN=52;BaseQRankSum=10.504;DP=652;FS=29.670;HRun=0;HaplotypeScore=197.3174;InbreedingCoeff=0.5652;MQ=53.18;MQ0=22;MQRankSum=-0.552;QD=3.44;ReadPosRankSum=0.305;VQSLOD=1.3404;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:62.86:0,63,1182	./.	0/0:12,0:5:14.83:0,15,175	0/1:12,0:5:6.80:7,0,109	0/0:40,0:39:34.49:0,34,607	0/0:17,0:17:51.16:0,51,892	0/0:15,0:13:30.10:0,30,495	0/0:52,0:42:99:0,122,1666	0/0:25,0:22:22.44:0,22,391	0/0:44,0:43:99:0,127,2247	0/0:29,0:29:84.26:0,84,1413	1/1:6,3:8:8.97:101,9,0	1/1:15,5:18:32.96:339,33,0	./.	0/1:25,0:24:1.18:1,0,531	0/0:23,0:23:17.61:0,18,457	0/0:21,0:21:51.07:0,51,850	0/0:13,0:12:8.64:0,9,369	0/0:14,0:8:19.10:0,19,305	0/1:30,0:30:2.37:2,0,733	0/0:10,0:10:17.79:0,18,240	0/0:29,0:26:69.05:0,69,1168	0/0:21,0:20:41.74:0,42,688	0/0:22,0:21:36.03:0,36,616	0/0:25,0:25:72.70:0,73,1244	0/0:33,0:32:70.81:0,71,1208	0/0:37,0:37:30.46:0,30,994	0/0:35,0:35:26.17:0,26,541
chr10	101318753	.	GGACA	G	188.72	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.716;DP=576;FS=1.437;HRun=0;HaplotypeScore=96.9473;InbreedingCoeff=0.9375;MQ=54.18;MQ0=21;MQRankSum=-4.259;QD=15.73;ReadPosRankSum=-1.711;VQSLOD=3.2509;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:54.19:0,54,1374	1/1:0,6:6:12.04:210,12,0	0/0:21,0:5:15.05:0,15,335	0/0:11,0:6:18.06:0,18,410	0/0:33,0:33:93.31:0,93,2258	0/0:26,0:26:75.22:0,75,1782	0/0:15,0:15:36.12:0,36,912	0/0:34,0:28:32.52:0,33,1505	0/0:22,0:22:51.18:0,51,1296	0/0:45,0:43:99:0,111,2585	0/0:17,0:16:39.12:0,39,918	0/0:15,0:15:39.12:0,39,942	0/0:13,0:13:24.07:0,24,559	1/1:6,0:6:9.01:87,9,0	0/0:24,0:24:69.20:0,69,1633	0/0:18,0:18:48.15:0,48,1136	0/0:23,0:22:51.07:0,51,1235	0/0:20,0:20:51.15:0,51,1206	0/0:13,0:12:33.11:0,33,823	0/0:21,0:20:57.18:0,57,1403	0/0:21,0:21:54.19:0,54,1373	0/0:16,0:16:47.37:0,47,1147	0/0:17,0:14:36.07:0,36,757	0/0:10,0:10:23.73:0,24,547	0/0:19,0:19:54.19:0,54,1373	0/0:29,0:28:72.23:0,72,1787	0/0:28,0:26:69.18:0,69,1591	0/0:28,0:28:75.26:0,75,1908
chr10	101318760	.	CAGACAGAT	C	171.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.751;DP=605;FS=14.802;HRun=0;HaplotypeScore=146.6840;InbreedingCoeff=0.9189;MQ=55.63;MQ0=16;MQRankSum=-2.650;QD=19.01;ReadPosRankSum=-0.495;VQSLOD=2.2654;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:57.20:0,57,2407	0/0:7,0:7:15.02:0,15,146	0/0:23,0:10:29.46:0,29,998	0/0:12,0:8:24.08:0,24,858	0/0:35,0:35:99:0,99,4052	0/0:27,0:27:81.28:0,81,3279	0/0:16,0:16:48.16:0,48,1867	0/0:36,0:30:82.82:0,83,3071	0/0:19,0:19:54.19:0,54,2311	0/0:45,0:43:99:0,123,4674	0/0:17,0:16:45.14:0,45,1759	0/0:15,0:15:39.13:0,39,1659	0/0:13,0:13:27.09:0,27,1045	1/1:0,9:9:9.03:254,9,0	0/0:24,0:24:72.25:0,72,2877	0/0:18,0:18:51.18:0,51,2054	0/0:23,0:22:60.13:0,60,2267	0/0:20,0:20:54.19:0,54,2024	0/0:14,0:13:39.13:0,39,1624	0/0:22,0:21:60.21:0,60,2489	0/0:19,0:19:57.20:0,57,2427	0/0:18,0:18:54.19:0,54,2132	0/0:22,0:19:45.13:0,45,1537	0/0:11,0:11:26.71:0,27,1005	0/0:22,0:22:63.22:0,63,2574	0/0:31,0:30:84.29:0,84,3562	0/0:29,0:27:72.25:0,72,2892	0/0:30,0:30:81.21:0,81,3336
chr10	101319028	.	C	CAG	793.07	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.376;DP=527;FS=0.877;HRun=0;HaplotypeScore=67.5291;InbreedingCoeff=0.9245;MQ=70.89;MQ0=0;MQRankSum=-1.303;QD=36.05;ReadPosRankSum=0.002;VQSLOD=5.5049;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,169,2524	1/1:1,2:3:6.02:116,6,0	0/0:12,0:13:14.83:0,15,365	0/0:11,0:10:18.02:0,18,231	0/0:13,0:13:39.13:0,39,597	0/0:16,0:16:42.14:0,42,642	0/0:19,0:19:54.12:0,54,758	0/0:19,0:19:54.17:0,54,789	0/0:10,0:10:27.09:0,27,412	0/0:16,0:16:48.16:0,48,735	0/0:9,0:9:27.09:0,27,413	0/0:29,0:29:84.25:0,84,1239	0/0:26,0:26:78.26:0,78,1193	1/1:2,16:19:42.14:789,42,0	0/0:11,0:11:33.11:0,33,505	0/0:11,0:11:30.10:0,30,459	0/0:37,0:37:99:0,111,1693	0/0:25,1:26:17.47:0,17,1023	0/0:18,0:18:51.17:0,51,761	0/0:11,0:11:33.11:0,33,505	0/0:39,0:39:99:0,114,1742	0/0:11,0:11:33.11:0,33,505	0/0:11,0:11:33.11:0,33,505	0/0:22,0:22:63.21:0,63,962	0/0:25,0:25:75.24:0,75,1126	0/0:15,0:15:45.15:0,45,689	0/0:15,0:15:45.15:0,45,689	0/0:15,0:15:42.13:0,42,621
chr10	101319822	.	CT	C	889.08	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.385;DP=572;FS=0.000;HRun=2;HaplotypeScore=57.0262;InbreedingCoeff=0.9916;MQ=75.16;MQ0=0;MQRankSum=-2.378;QD=34.20;ReadPosRankSum=1.570;VQSLOD=3.7155;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.18:0,54,809	1/1:0,6:6:18.06:230,18,0	0/0:29,0:28:75.10:0,75,959	0/0:22,0:22:44.47:0,44,734	0/0:17,0:17:51.17:0,51,764	0/0:17,0:17:51.13:0,51,739	0/0:26,0:26:75.25:0,75,1123	0/0:19,0:19:57.19:0,57,853	0/0:26,0:26:78.23:0,78,1112	0/0:25,0:25:72.24:0,72,1062	0/0:16,0:16:45.14:0,45,654	0/0:26,0:26:78.25:0,78,1147	0/0:19,0:19:57.18:0,57,833	1/1:0,20:20:60.20:779,60,0	0/0:27,0:27:81.27:0,81,1213	0/0:15,0:15:45.15:0,45,675	0/0:23,0:23:66.22:0,66,989	0/0:14,0:14:42.12:0,42,601	0/0:23,0:23:66.22:0,66,987	0/0:29,0:29:87.27:0,87,1263	0/0:34,0:34:99:0,102,1529	0/0:23,0:23:69.23:0,69,1016	0/0:7,0:7:18.06:0,18,270	0/0:18,0:18:54.18:0,54,809	0/0:18,0:18:47.67:0,48,719	0/0:21,0:21:60.19:0,60,881	0/0:20,0:20:60.18:0,60,877	0/0:13,0:13:39.13:0,39,585
chr10	101319932	.	CTT	C	814.47	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.807;DP=595;FS=2.456;HRun=10;HaplotypeScore=76.2217;InbreedingCoeff=0.9715;MQ=58.82;MQ0=2;MQRankSum=3.481;QD=21.43;ReadPosRankSum=-0.152;VQSLOD=3.0255;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:56.91:0,57,897	1/1:5,10:15:27.06:301,27,0	0/0:9,0:7:14.37:0,14,165	0/0:13,0:9:11.43:0,11,311	0/0:32,0:32:93.31:0,93,1452	0/0:28,0:28:75.23:0,75,1146	0/0:15,0:15:36.12:0,36,570	0/0:17,0:18:47.64:0,48,702	0/0:25,0:27:68.71:0,69,1035	0/0:21,0:22:59.68:0,60,894	0/0:24,0:25:63.20:0,63,960	0/0:4,0:17:39.07:0,39,386	0/0:3,0:23:33.06:0,33,336	1/1:3,20:23:57.15:635,57,0	0/0:38,0:38:99:0,108,1680	0/0:9,0:11:30.09:0,30,438	0/0:26,0:27:74.55:0,75,1151	0/0:19,0:19:51.17:0,51,808	0/0:22,0:21:63.21:0,63,1000	0/0:25,0:26:69.23:0,69,1069	0/0:18,0:19:48.16:0,48,743	0/0:21,0:22:57.15:0,57,854	0/0:18,0:18:41.73:0,42,666	0/0:10,0:10:27.09:0,27,429	0/0:18,0:18:48.16:0,48,762	0/0:25,0:28:76.70:0,77,1076	0/0:31,0:31:81.28:0,81,1280	0/0:16,0:16:48.16:0,48,762
chr10	101320542	.	G	GT	6576.04	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=12.794;DP=698;FS=9.492;HRun=6;HaplotypeScore=87.0440;InbreedingCoeff=0.9236;MQ=61.81;MQ0=4;MQRankSum=6.260;QD=30.30;ReadPosRankSum=1.597;VQSLOD=5.0121;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,23:32:47.61:882,48,0	0/1:9,0:9:9.96:10,0,218	0/0:29,0:23:44.94:0,45,430	0/0:23,0:20:13.04:0,13,310	0/0:32,0:32:93.21:0,93,949	0/0:30,0:30:84.18:0,84,850	0/0:21,0:21:54.10:0,54,543	0/0:25,0:25:69.15:0,69,704	1/1:1,18:19:51.16:641,51,0	0/0:31,0:31:87.20:0,87,888	0/0:22,0:22:63.11:0,63,629	1/1:6,25:31:78.21:938,78,0	1/1:6,17:23:66.14:784,66,0	1/1:2,11:13:27.09:340,27,0	0/0:27,0:27:72.12:0,72,718	1/1:4,16:19:57.17:705,57,0	0/0:29,0:28:57.55:0,58,654	0/0:33,0:33:93.21:0,93,948	0/0:27,0:26:72.13:0,72,721	0/0:31,0:31:90.16:0,90,901	0/0:23,0:23:66.12:0,66,660	1/1:4,20:24:60.18:736,60,0	1/1:4,25:29:81.24:1001,81,0	1/1:4,12:16:45.12:540,45,0	0/0:31,0:31:90.20:0,90,918	0/0:23,0:23:59.34:0,59,584	0/0:29,0:29:78.13:0,78,781	0/0:15,0:15:36.06:0,36,359
chr10	101320619	.	A	AT	5895.70	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-7.343;DP=700;FS=11.604;HRun=7;HaplotypeScore=68.9812;InbreedingCoeff=0.9998;MQ=63.11;MQ0=0;MQRankSum=2.112;QD=32.22;ReadPosRankSum=2.625;VQSLOD=4.1847;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:34:87.25:1035,87,0	0/0:10,0:10:30.05:0,30,290	0/0:30,0:27:69:0,69,656	0/0:24,0:19:36.81:0,37,423	0/0:35,0:35:96.12:0,96,913	0/0:28,0:28:75.08:0,75,712	0/0:19,0:19:51.06:0,51,488	0/0:31,0:31:78.08:0,78,737	1/1:2,11:13:33.10:398,33,0	0/0:36,0:36:93.10:0,93,887	0/0:26,0:26:69.10:0,69,666	1/1:2,24:26:75.21:887,75,0	1/1:2,15:17:42.13:507,42,0	0/0:18,0:18:42.05:0,42,400	0/0:24,0:24:66.09:0,66,632	1/1:1,23:24:69.21:834,69,0	0/0:30,0:31:91.96:0,92,874	0/0:33,0:33:84.04:0,84,784	0/0:18,0:17:45.06:0,45,429	0/0:28,0:28:72.11:0,72,695	0/0:31,0:31:81.11:0,81,776	1/1:3,27:30:84.25:1003,84,0	1/1:1,22:23:66.20:797,66,0	1/1:3,13:16:36.11:435,36,0	0/0:30,0:30:81.13:0,81,782	0/0:26,0:26:69.07:0,69,653	0/0:21,0:20:60.10:0,60,579	0/0:18,0:18:54.09:0,54,521
chr10	101321129	.	A	AT	1603.69	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.560;DP=768;FS=0.599;HRun=1;HaplotypeScore=95.4819;InbreedingCoeff=0.9999;MQ=88.90;MQ0=0;MQRankSum=-3.928;QD=36.45;ReadPosRankSum=0.572;VQSLOD=3.7386;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,147,1795	1/1:1,12:13:36.08:513,36,0	0/0:27,0:27:72.18:0,72,871	0/0:28,0:28:71.37:0,71,869	0/0:28,0:28:72.20:0,72,892	0/0:15,0:15:39.13:0,39,505	0/0:21,0:21:63.20:0,63,817	0/0:28,0:28:75.21:0,75,924	0/0:29,0:29:84.24:0,84,1060	0/0:31,0:31:87.26:0,87,1094	0/0:21,0:21:57.16:0,57,722	0/0:22,0:22:66.15:0,66,788	0/0:29,0:29:87.26:0,87,1093	1/1:0,31:31:81.27:1212,81,0	0/0:44,0:44:99:0,132,1667	0/0:28,0:28:84.24:0,84,1049	0/0:25,0:25:72.10:0,72,878	0/0:15,0:15:45.13:0,45,566	0/0:25,0:25:75.21:0,75,934	0/0:41,0:41:99:0,120,1486	0/0:30,0:30:90.27:0,90,1150	0/0:25,0:25:75.23:0,75,951	0/0:23,0:23:66.08:0,66,830	0/0:29,0:29:78.24:0,78,997	0/0:20,0:20:54.17:0,54,695	0/0:37,0:37:99:0,108,1340	0/0:39,0:39:99:0,114,1447	0/0:15,0:15:45.10:0,45,539
chr10	101321473	.	G	GAACA	9070.08	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-14.614;DP=785;FS=20.995;HRun=0;HaplotypeScore=116.4889;InbreedingCoeff=0.9990;MQ=74.02;MQ0=1;MQRankSum=-1.586;QD=41.42;ReadPosRankSum=3.196;VQSLOD=3.6063;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,31:43:78.22:1858,78,0	0/0:20,0:20:48.14:0,48,743	0/0:37,0:33:48.04:0,48,702	0/0:30,0:30:33.06:0,33,494	0/0:32,0:32:75.11:0,75,1153	0/0:29,0:29:69.21:0,69,1084	0/0:27,0:27:66.19:0,66,1036	0/0:47,0:47:69.18:0,69,1021	1/1:7,14:21:36.12:866,36,0	0/0:44,0:44:96.31:0,96,1537	0/0:25,0:25:54.17:0,54,864	0/0:26,0:26:60.16:0,60,917	0/0:29,0:29:66.19:0,66,1033	1/1:5,20:26:45.15:1101,45,0	0/0:35,0:35:84.24:0,84,1306	1/1:9,28:38:81.21:1913,81,0	0/0:22,0:22:26.87:0,27,689	0/0:13,0:13:24.08:0,24,390	0/0:17,0:17:33.08:0,33,493	0/0:30,0:30:66.21:0,66,1065	0/0:14,0:14:30.07:0,30,446	1/1:8,28:35:66.10:1508,66,0	1/1:12,16:29:30.10:736,30,0	1/1:4,19:22:33.41:1089,33,0	0/0:20,0:20:45.15:0,45,742	0/0:26,0:26:69.18:0,69,1065	0/0:32,0:31:78.24:0,78,1238	0/0:11,0:11:33.11:0,33,545
chr10	101321816	.	TGG	T	4181.01	PASS	AB=0.680;AC=19;AF=0.352;AN=54;BaseQRankSum=-2.638;DP=452;FS=5.905;HRun=10;HaplotypeScore=68.6576;InbreedingCoeff=0.8299;MQ=78.43;MQ0=1;MQRankSum=-3.022;QD=23.23;ReadPosRankSum=3.604;VQSLOD=3.1708;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:20.73:0,21,191	0/0:10,0:11:26.51:0,27,277	0/0:16,0:15:41.96:0,42,518	0/0:14,0:13:5.59:0,6,260	0/0:19,0:20:38.59:0,39,535	0/0:15,0:16:35.56:0,36,424	0/0:15,0:16:38.57:0,39,552	1/1:8,13:21:36.93:472,37,0	0/0:1,0:13:3:0,3,29	0/0:8,0:8:15.04:0,15,215	0/0:9,0:10:12.03:0,12,169	0/1:9,1:17:37.40:37,0,49	0/0:4,1:24:17.29:0,17,133	0/0:12,0:23:5.17:0,5,95	1/1:5,9:14:33.08:364,33,0	./.	0/0:15,0:19:45.57:0,46,524	1/1:1,15:16:42.11:468,42,0	1/1:6,6:12:27.07:297,27,0	1/1:8,15:23:51.11:565,51,0	1/1:4,13:17:36.08:394,36,0	0/0:19,0:19:19.74:0,20,131	0/0:8,0:8:10.30:0,10,87	0/0:2,0:14:9.01:0,9,86	0/0:14,0:15:24.43:0,24,316	1/1:9,18:27:60.13:650,60,0	1/1:8,20:28:69.18:766,69,0	1/1:0,5:5:15.04:167,15,0
chr10	101321825	.	GGT	G	1236.43	PASS	AB=0.904;AC=15;AF=0.268;AN=56;BaseQRankSum=9.472;DP=452;FS=11.140;HRun=0;HaplotypeScore=75.0797;InbreedingCoeff=0.2806;MQ=78.49;MQ0=1;MQRankSum=-2.361;QD=6.44;ReadPosRankSum=7.716;VQSLOD=1.0945;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:38.91:0,39,415	0/0:14,0:14:41.96:0,42,525	0/0:19,0:18:48.34:0,48,580	0/1:9,0:10:19.33:19,0,205	0/0:18,0:18:51:0,51,725	0/0:16,0:16:44.05:0,44,605	0/0:12,0:12:36.02:0,36,597	0/1:21,2:23:99:115,0,141	0/0:12,0:12:3.01:0,3,31	0/0:11,0:11:33.02:0,33,391	0/0:12,0:12:28.92:0,29,314	0/1:15,1:16:11.99:12,0,188	0/0:26,0:26:32.48:0,32,303	0/0:18,2:20:10.65:0,11,193	0/1:11,2:13:16.04:118,0,16	0/0:11,0:11:8.91:0,9,65	0/0:16,0:16:47.31:0,47,652	1/1:16,0:16:19.48:160,19,0	0/1:12,2:14:89.72:113,0,90	0/1:24,2:26:99:189,0,138	0/1:18,1:19:41:101,0,41	0/0:20,0:20:40.74:0,41,396	0/0:10,0:10:23.98:0,24,249	0/0:15,0:15:18.01:0,18,181	0/0:14,0:14:33.45:0,33,457	1/1:22,2:24:1.66:185,2,0	1/1:21,4:25:39.76:332,40,0	1/1:5,0:5:13.37:63,13,0
chr10	101323315	.	A	AT	5595	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-14.042;DP=546;FS=2.999;HRun=8;HaplotypeScore=51.9628;InbreedingCoeff=0.9815;MQ=84.85;MQ0=0;MQRankSum=-2.565;QD=28.69;ReadPosRankSum=-1.829;VQSLOD=4.6336;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.01:0,60,545	0/0:11,0:11:24.01:0,24,219	0/0:18,0:19:25.29:0,25,314	0/0:18,0:18:38.40:0,38,329	0/0:34,0:34:87.04:0,87,796	0/0:18,1:19:19.41:0,19,432	0/0:11,0:11:33.02:0,33,302	1/1:6,25:31:77.98:855,78,0	0/0:16,0:16:41.82:0,42,384	0/0:25,0:25:66.02:0,66,600	0/0:19,0:19:48.02:0,48,439	0/0:12,0:12:33.01:0,33,302	0/0:21,0:21:60.02:0,60,545	0/0:22,0:22:42.18:0,42,528	1/1:1,12:13:33.10:381,33,0	0/0:13,0:13:36.02:0,36,330	0/0:12,0:11:33.02:0,33,302	1/1:1,20:21:60.10:664,60,0	1/1:2,19:21:57.14:637,57,0	1/1:2,35:37:74.84:1115,75,0	1/1:2,13:15:40.93:455,41,0	0/0:15,0:15:39.02:0,39,357	0/0:28,0:28:78.03:0,78,714	0/0:8,0:8:23.97:0,24,212	0/0:26,0:26:60.02:0,60,549	1/1:3,19:22:57.17:658,57,0	1/1:5,25:30:66.20:762,66,0	1/1:3,2:5:6.02:69,6,0
chr10	101323740	.	A	ATTATAT	28647.56	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-7.705;DP=584;FS=7.013;HRun=0;HaplotypeScore=114.5249;InbreedingCoeff=0.9864;MQ=78.76;MQ0=0;MQRankSum=-16.832;QD=78.06;ReadPosRankSum=-2.787;VQSLOD=5.2826;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:6,26:32:75.21:2501,75,0	1/1:8,3:11:24:568,24,0	0/0:23,0:23:56:0,56,1218	0/0:16,0:16:39.10:0,39,814	0/0:26,0:26:78.27:0,78,1758	0/0:29,0:29:78.27:0,78,1779	0/0:22,0:22:54.18:0,54,1186	1/1:18,20:39:99:3175,105,0	1/1:4,17:22:54.19:1875,54,0	0/0:28,0:28:72.23:0,72,1510	0/0:22,0:22:66.23:0,66,1481	1/1:4,9:13:36.12:1233,36,0	1/1:9,16:25:69.19:2232,69,0	1/1:4,11:15:36.12:1243,36,0	1/1:4,15:19:48.16:1654,48,0	1/1:8,17:25:63.18:2057,63,0	0/0:21,0:21:63.22:0,63,1439	1/1:2,5:7:15.05:509,15,0	1/1:7,9:18:48.12:1406,48,0	1/1:11,11:24:54.01:1454,54,0	1/1:9,2:11:9.03:298,9,0	1/1:3,9:12:33.07:1061,33,0	1/1:4,12:16:27.01:937,27,0	1/1:4,9:14:27.05:853,27,0	0/0:30,0:30:84.29:0,84,1914	1/1:7,22:30:29.71:2623,30,0	1/1:8,20:27:69.24:2342,69,0	1/1:3,3:6:18.06:626,18,0
chr10	101324255	.	G	GA	1605.50	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-7.106;DP=491;FS=1.157;HRun=8;HaplotypeScore=48.0377;InbreedingCoeff=0.9892;MQ=83.08;MQ0=0;MQRankSum=-2.128;QD=27.21;ReadPosRankSum=1.226;VQSLOD=4.2037;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:33:0,33,297	1/1:1,9:10:27.08:312,27,0	0/0:16,0:15:24.44:0,24,232	0/0:14,0:14:16.21:0,16,160	0/0:30,0:30:78.03:0,78,709	0/0:21,0:21:57:0,57,512	0/0:15,0:15:36:0,36,330	0/0:29,0:29:72.02:0,72,655	0/0:18,0:18:45.01:0,45,412	0/0:21,0:21:57.03:0,57,522	0/0:19,0:19:57.03:0,57,522	1/1:0,18:18:51.15:589,51,0	1/1:3,14:17:39.12:450,39,0	1/1:1,13:14:36.11:416,36,0	0/0:16,0:16:39.02:0,39,357	0/0:13,0:13:39.02:0,39,357	0/0:17,0:17:51.03:0,51,467	0/0:9,0:9:27.01:0,27,247	0/0:18,0:18:42:0,42,384	0/0:26,0:26:66.01:0,66,600	0/0:7,0:7:20.98:0,21,185	0/0:22,0:22:60.03:0,60,549	0/0:23,0:23:60.02:0,60,549	0/0:8,0:8:24.01:0,24,220	0/0:23,0:23:54.02:0,54,494	0/0:19,0:19:54.03:0,54,494	0/0:30,0:30:84.03:0,84,763	0/0:5,0:5:15.01:0,15,137
chr10	101325485	.	G	GAAACA	395.63	PASS	AB=0.682;AC=1;AF=0.018;AN=56;BaseQRankSum=-0.031;DP=667;FS=1.635;HRun=0;HaplotypeScore=142.0008;InbreedingCoeff=-0.0206;MQ=77.84;MQ0=3;MQRankSum=-3.894;QD=26.38;ReadPosRankSum=0.739;VQSLOD=3.2870;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:57.19:0,57,1030	0/1:8,7:15:34.34:470,0,34	0/0:31,0:30:20.92:0,21,252	0/0:31,0:18:15.63:0,16,202	0/0:29,0:29:57.18:0,57,1013	0/0:40,0:40:93.30:0,93,1635	0/0:19,0:19:30.10:0,30,547	0/0:30,0:30:33.11:0,33,603	0/0:21,0:21:39.13:0,39,721	0/0:26,0:26:57.19:0,57,1025	0/0:19,0:19:30.10:0,30,526	0/0:25,0:25:51.17:0,51,923	0/0:25,0:25:57.18:0,57,1034	0/0:15,0:15:24.08:0,24,444	0/0:26,0:26:45.13:0,45,779	0/0:23,0:23:54.18:0,54,978	0/0:28,0:28:72.21:0,72,1230	0/0:16,0:16:33.11:0,33,609	0/0:19,0:18:9.03:0,9,140	0/0:25,0:25:36.12:0,36,642	0/0:19,0:19:42.14:0,42,755	0/0:24,0:24:51.17:0,51,880	0/0:9,0:9:21.07:0,21,385	0/0:33,0:33:63.21:0,63,1134	0/0:23,0:23:45.14:0,45,762	0/0:17,0:17:33.10:0,33,582	0/0:33,0:32:66.17:0,66,1151	0/0:11,0:11:30.10:0,30,531
chr10	101325758	.	T	TCACACACA	2216.29	PASS	AB=0.810;AC=28;AF=0.609;AN=46;BaseQRankSum=6.781;DP=622;FS=15.433;HRun=0;HaplotypeScore=178.9131;InbreedingCoeff=0.5875;MQ=52.61;MQ0=15;MQRankSum=-7.910;QD=6.72;ReadPosRankSum=-4.892;VQSLOD=-0.6658;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:6.02:113,6,0	./.	0/0:39,0:22:2.55:0,3,76	0/0:33,0:14:3.89:0,4,58	0/0:19,0:19:30.04:0,30,614	0/1:30,0:30:14.27:14,0,837	0/0:27,0:27:33.25:0,33,995	1/1:35,0:32:23.24:306,23,0	1/1:30,0:29:11.83:220,12,0	0/0:17,0:20:31.77:0,32,785	0/0:16,0:16:24.05:0,24,490	./.	1/1:24,0:23:11.87:247,12,0	0/1:12,15:31:0:0,0,0	./.	1/1:26,0:24:6.02:196,6,0	0/0:29,0:28:4.67:0,5,1024	1/1:5,0:5:6.02:173,6,0	1/1:19,0:17:15.04:240,15,0	1/1:18,0:20:3.01:73,3,0	./.	1/1:18,0:15:3.01:72,3,0	1/1:12,0:12:2.55:34,3,0	./.	0/0:29,0:32:63.21:0,63,1500	1/1:26,0:23:1.29:371,1,0	1/1:23,0:22:16.87:266,17,0	1/1:9,0:9:5.96:53,6,0
chr10	101325792	.	GAGAGAGAGAGAC	G	737.91	PASS	AB=0.877;AC=18;AF=0.391;AN=46;BaseQRankSum=6.722;DP=509;FS=9.418;HRun=0;HaplotypeScore=173.1239;InbreedingCoeff=0.4122;MQ=42.03;MQ0=48;MQRankSum=-4.734;QD=3.65;ReadPosRankSum=2.026;VQSLOD=1.8667;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:10,0:8:8.94:0,9,115	./.	./.	0/0:22,0:22:54.11:0,54,2151	0/0:24,0:23:53.65:0,54,1594	0/0:30,0:23:51.04:0,51,1177	0/0:22,0:16:44.42:0,44,378	1/1:4,15:19:8.96:233,9,0	0/0:26,0:23:66.10:0,66,2021	0/0:23,0:23:39.08:0,39,1530	1/1:13,0:11:3.01:57,3,0	1/1:15,0:14:20.77:321,21,0	0/1:21,0:25:0:0,0,0	./.	1/1:4,18:21:6.92:125,7,0	0/0:30,0:28:69.01:0,69,2632	0/1:6,0:5:16.47:88,0,16	0/1:17,0:17:29.74:30,0,299	./.	0/1:9,0:6:0:0,0,0	0/1:7,11:15:0:0,0,0	0/1:2,8:10:0.28:0,0,1	1/1:12,0:10:0.47:1,0,0	0/0:32,0:31:78.04:0,78,1552	0/1:19,0:16:16.06:16,0,193	0/1:16,0:15:2.58:3,0,34	0/0:5,0:4:7.04:0,7,32
chr10	101325802	.	GACAGAGAC	G	2903.73	PASS	AB=0.792;AC=26;AF=0.500;AN=52;BaseQRankSum=8.805;DP=519;FS=0.550;HRun=0;HaplotypeScore=154.4352;InbreedingCoeff=0.4623;MQ=43.31;MQ0=52;MQRankSum=-7.749;QD=10.83;ReadPosRankSum=-0.801;VQSLOD=2.6073;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:7,0:8:9.43:111,9,0	./.	0/1:18,0:1:0:0,0,0	0/0:26,0:26:69.24:0,69,2040	0/0:24,0:23:36.10:0,36,1277	0/0:29,0:22:38.97:0,39,1271	1/1:9,0:20:47.64:549,48,0	0/1:19,0:19:3.83:82,0,4	0/0:26,0:23:69.13:0,69,1835	0/0:21,0:21:26.20:0,26,1155	1/1:2,0:14:3:55,3,0	1/1:3,0:16:0.98:242,1,0	0/1:22,0:21:0:0,0,0	0/0:5,9:13:0:0,0,0	1/1:22,0:21:6.77:56,7,0	0/0:27,0:26:68.68:0,69,2183	1/1:6,1:6:0.80:204,1,0	1/1:2,14:16:42.02:599,42,0	0/1:6,15:19:0.01:0,0,0	0/1:4,7:8:0.01:0,0,0	0/0:16,0:15:0:0,0,0	0/1:10,0:10:0.27:0,0,0	1/1:15,0:13:0.39:0,0,0	0/0:36,0:35:84.24:0,84,1751	0/1:4,13:16:11.44:624,0,11	0/1:4,12:15:19.45:348,0,19	1/1:3,4:6:7.27:178,7,0
chr10	101327176	.	A	ATT	21619.46	PASS	AB=0.680;AC=55;AF=0.982;AN=56;BaseQRankSum=-4.091;DP=611;FS=6.347;HRun=2;HaplotypeScore=87.4266;InbreedingCoeff=-0.0198;MQ=81.86;MQ0=2;MQRankSum=-2.508;QD=35.38;ReadPosRankSum=2.445;VQSLOD=4.7878;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:72.25:1349,72,0	1/1:0,9:9:21.07:394,21,0	1/1:2,0:17:13.65:113,14,0	0/1:9,0:17:67.88:69,0,68	1/1:0,0:29:51.96:174,52,0	1/1:3,0:25:33.54:140,34,0	1/1:0,0:11:22.20:72,22,0	1/1:4,29:33:87.30:1624,87,0	1/1:0,21:21:60.21:1123,60,0	1/1:1,0:28:59.95:194,60,0	1/1:1,0:25:50.88:165,51,0	1/1:1,15:15:42.14:787,42,0	1/1:0,18:18:42.14:787,42,0	1/1:0,22:23:57.20:1068,57,0	1/1:0,25:25:63.22:1180,63,0	1/1:1,16:18:39.13:731,39,0	1/1:1,0:22:39.96:130,40,0	1/1:1,13:13:39.13:730,39,0	1/1:1,22:24:72.24:1312,72,0	1/1:0,14:14:42.10:729,42,0	1/1:0,19:20:54.19:1012,54,0	1/1:1,23:24:66.23:1218,66,0	1/1:0,23:24:66.20:1202,66,0	1/1:1,31:32:84.29:1574,84,0	1/1:0,0:21:39.96:129,40,0	1/1:0,32:34:99:1738,101,0	1/1:4,28:31:87.26:1594,87,0	1/1:0,7:8:15.05:281,15,0
chr10	101328632	.	A	AT	585.41	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.336;DP=584;FS=14.581;HRun=9;HaplotypeScore=58.9144;InbreedingCoeff=0.9614;MQ=70.69;MQ0=0;MQRankSum=0.793;QD=18.29;ReadPosRankSum=0.741;VQSLOD=2.5033;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:56.97:0,57,494	1/1:2,0:10:22.73:114,23,0	0/0:15,0:13:20.96:0,21,178	0/0:5,0:5:11.90:0,12,104	0/0:33,0:33:89.89:0,90,781	0/0:24,0:24:56.92:0,57,486	0/0:18,0:19:29.62:0,30,399	0/0:31,0:32:73.97:0,74,623	0/0:15,0:15:38.97:0,39,334	0/0:30,0:30:68.95:0,69,599	0/0:27,0:27:65.95:0,66,569	0/0:25,0:25:53.97:0,54,469	0/0:22,1:23:11.79:0,12,331	1/1:4,18:22:54.14:593,54,0	0/0:26,0:26:68.98:0,69,599	0/0:19,0:19:47.97:0,48,416	0/0:14,0:14:38.96:0,39,332	0/0:16,0:16:35.99:0,36,313	0/0:23,0:23:59.97:0,60,517	0/0:22,0:22:53.97:0,54,468	0/0:12,0:12:29.99:0,30,260	0/0:25,0:25:59.98:0,60,521	0/0:24,0:24:68.98:0,69,598	0/0:12,0:12:32.96:0,33,281	0/0:20,0:20:44.89:0,45,390	0/0:20,1:21:20.79:0,21,409	0/0:27,1:28:38.80:0,39,566	0/0:18,0:18:41.99:0,42,364
chr10	101328716	.	AT	A	6074.61	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=10.835;DP=586;FS=0.661;HRun=9;HaplotypeScore=59.5994;InbreedingCoeff=0.9854;MQ=74.93;MQ0=0;MQRankSum=-0.380;QD=23.64;ReadPosRankSum=-0.444;VQSLOD=5.4068;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.18:0,69,776	0/0:4,0:12:25.69:0,26,135	0/0:13,0:14:24.04:0,24,248	0/0:8,0:8:18.05:0,18,200	0/0:26,0:26:69.21:0,69,796	0/0:22,0:22:63.19:0,63,727	0/0:14,1:15:11.65:0,12,388	1/1:2,34:36:99:899,99,0	0/0:24,0:24:66.20:0,66,762	0/0:26,1:27:47.74:0,48,790	0/0:23,0:23:66.20:0,66,762	1/1:1,20:21:57.03:522,57,0	1/1:1,22:23:63.03:577,63,0	0/0:21,0:21:54.16:0,54,623	1/1:0,27:27:78.04:714,78,0	0/0:16,1:17:17.66:0,18,449	0/0:14,0:14:39.12:0,39,450	1/1:3,15:18:10.40:350,10,0	1/1:1,20:21:57.03:519,57,0	1/1:4,29:33:87.04:796,87,0	1/1:2,15:17:45.02:412,45,0	0/0:20,0:20:57.17:0,57,658	0/0:20,0:20:48.14:0,48,554	0/0:23,0:23:60.14:0,60,678	0/0:18,0:18:51.14:0,51,581	1/1:2,19:21:54.01:490,54,0	1/1:3,24:27:66.03:604,66,0	1/1:3,10:13:21.01:192,21,0
chr10	101328930	.	T	TCACACACACA	5529.54	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=0.547;DP=628;FS=3.927;HRun=0;HaplotypeScore=176.8394;InbreedingCoeff=0.6779;MQ=65.30;MQ0=16;MQRankSum=-5.844;QD=13.93;ReadPosRankSum=-2.213;VQSLOD=3.6183;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:30:44.45:310,0,44	1/1:12,0:12:15.05:290,15,0	0/0:26,0:17:6.02:0,6,94	0/0:39,0:26:3.01:0,3,36	0/0:19,0:20:23.03:0,23,688	0/0:22,0:23:22.06:0,22,711	0/0:23,0:26:24.67:0,25,407	1/1:30,0:29:22.63:535,23,0	1/1:17,8:24:15.05:618,15,0	0/0:23,0:24:8.89:0,9,553	0/0:20,0:20:18.06:0,18,533	1/1:5,0:18:6.02:181,6,0	1/1:18,0:18:21.05:498,21,0	1/1:14,0:27:13.71:92,14,0	1/1:14,10:25:3.01:149,3,0	1/1:15,0:14:9.03:224,9,0	0/0:30,0:31:40.26:0,40,891	1/1:8,7:17:3.01:149,3,0	1/1:19,0:18:23.26:308,23,0	1/1:12,3:14:2.92:148,3,0	1/1:14,0:10:6.02:121,6,0	1/1:22,0:22:5.92:114,6,0	1/1:22,0:20:8.81:61,9,0	1/1:27,0:25:2.39:108,2,0	0/0:18,0:19:21.01:0,21,396	1/1:21,0:19:32.24:730,32,0	1/1:15,12:29:21.03:676,21,0	1/1:3,3:8:6.02:218,6,0
chr10	101330743	.	A	ATT	1978.05	PASS	AB=0.935;AC=28;AF=0.500;AN=56;BaseQRankSum=-1.236;DP=367;FS=0.000;HRun=14;HaplotypeScore=60.5333;InbreedingCoeff=0.5338;MQ=75.88;MQ0=1;MQRankSum=0.067;QD=9.07;ReadPosRankSum=-3.450;VQSLOD=0.4569;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:22:21.37:0,21,238	0/0:5,0:5:11.97:0,12,99	0/1:16,0:13:14.80:15,0,15	0/0:8,0:8:11.53:0,12,81	0/0:19,0:19:23.45:0,23,196	0/0:16,0:16:32.81:0,33,274	0/0:7,0:7:8.77:0,9,69	1/1:8,12:23:46.72:455,47,0	0/1:8,0:8:7.11:14,0,7	0/0:16,0:18:10.59:0,11,127	0/1:11,0:13:3.44:3,0,116	1/1:6,0:6:9:77,9,0	1/1:2,0:7:4.59:27,5,0	1/1:11,1:12:26.96:238,27,0	1/1:3,11:15:8.98:98,9,0	0/1:9,0:9:27.11:27,0,85	0/0:17,0:17:20.35:0,20,163	1/1:7,8:15:9.02:108,9,0	1/1:6,1:17:33.24:253,33,0	1/1:2,1:14:34.44:233,34,0	0/1:4,6:11:12.70:76,0,13	0/0:15,0:15:20.61:0,21,168	0/0:7,0:8:8.55:0,9,62	0/0:12,0:14:23.12:0,23,170	0/1:6,0:6:18.52:19,0,19	1/1:15,0:15:29.93:263,30,0	1/1:6,15:21:11.92:101,12,0	1/1:2,5:9:15.04:175,15,0
chr10	101332531	.	CACCAGCATCACT	C	7006.04	PASS	AB=0.559;AC=37;AF=0.661;AN=56;BaseQRankSum=7.489;DP=963;FS=4.544;HRun=0;HaplotypeScore=285.5626;InbreedingCoeff=0.7784;MQ=59.93;MQ0=3;MQRankSum=-5.460;QD=10.52;ReadPosRankSum=3.304;VQSLOD=2.8556;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,31:48:3.01:56,3,0	1/1:10,0:10:18.03:345,18,0	0/0:42,0:34:37.22:0,37,449	0/0:44,0:33:34.46:0,34,456	0/0:26,0:26:57.10:0,57,1272	0/0:25,0:25:39.12:0,39,1101	0/0:45,0:45:99:0,108,2694	1/1:17,0:16:21.01:242,21,0	1/1:15,25:40:15.05:422,15,0	0/0:43,0:43:76.42:0,76,2039	0/0:19,0:19:39.07:0,39,933	1/1:13,35:48:24.08:672,24,0	1/1:11,36:47:12.04:350,12,0	1/1:10,37:47:12.04:367,12,0	1/1:7,36:43:12.04:325,12,0	1/1:4,23:27:11.69:344,12,0	0/0:38,0:38:90.20:0,90,2648	0/1:8,30:38:9.66:206,0,10	1/1:11,11:22:33.01:577,33,0	1/1:12,6:18:8.87:75,9,0	1/1:91,0:90:95.96:1545,96,0	1/1:6,12:18:2.31:38,2,0	1/1:8,8:16:2.93:39,3,0	1/1:22,46:68:2.96:35,3,0	0/0:14,0:13:26.79:0,27,498	1/1:16,19:35:49.28:689,49,0	1/1:4,17:21:5.83:50,6,0	1/1:10,2:12:32.98:630,33,0
chr10	101332989	.	CT	C	987.72	PASS	AB=0.853;AC=15;AF=0.268;AN=56;BaseQRankSum=5.043;DP=489;FS=2.250;HRun=13;HaplotypeScore=63.2116;InbreedingCoeff=0.5192;MQ=76.89;MQ0=2;MQRankSum=1.779;QD=6.13;ReadPosRankSum=2.693;VQSLOD=2.3223;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,22:32:14.88:319,15,0	0/0:4,0:16:25.81:0,26,146	0/1:27,0:17:14:14,0,49	0/0:13,1:12:0.99:0,1,36	0/0:20,0:23:45.36:0,45,414	0/0:14,0:17:37.55:0,38,325	0/0:13,1:15:10.27:0,10,278	0/0:20,1:26:12.08:0,12,292	0/1:3,6:9:32.36:88,0,32	0/0:21,0:21:42.05:0,42,401	0/0:18,1:26:23.77:0,24,384	0/0:4,0:13:6.03:0,6,39	0/0:4,0:13:14.37:0,14,86	0/0:1,0:13:14.22:0,14,72	0/0:15,0:19:40.88:0,41,393	1/1:5,5:11:13.91:93,14,0	0/0:26,3:29:12.38:0,12,590	0/0:15,0:15:39:0,39,360	0/1:16,2:18:4.81:5,0,272	0/0:7,0:7:15.02:0,15,142	0/1:7,1:8:9.85:10,0,76	1/1:2,5:7:11.87:87,12,0	1/1:4,14:18:35.77:263,36,0	1/1:4,15:20:17.57:283,18,0	0/0:13,0:14:26.96:0,27,242	0/0:23,1:25:27.16:0,27,386	0/0:18,0:20:46.13:0,46,416	0/1:9,1:10:0.92:1,0,141
chr10	101333661	.	CA	C	4457.06	PASS	AB=0.595;AC=17;AF=0.304;AN=56;BaseQRankSum=10.281;DP=603;FS=11.347;HRun=9;HaplotypeScore=63.4979;InbreedingCoeff=0.8925;MQ=87.83;MQ0=0;MQRankSum=-0.626;QD=21.74;ReadPosRankSum=0.226;VQSLOD=4.9530;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:81.17:0,81,897	0/0:6,0:6:18.05:0,18,208	0/0:19,0:20:34.82:0,35,355	0/0:25,1:25:26.59:0,27,476	0/0:17,0:17:48.11:0,48,527	0/0:26,0:26:69.20:0,69,788	0/0:21,0:21:54.16:0,54,623	1/1:6,31:37:93.04:851,93,0	0/0:24,0:24:57.17:0,57,658	0/0:18,0:18:42.12:0,42,477	0/0:17,0:17:48.13:0,48,546	0/0:14,0:14:13.10:0,13,380	0/0:19,0:19:57.15:0,57,647	0/0:22,0:22:63.19:0,63,727	1/1:2,23:25:60.03:549,60,0	0/0:30,0:30:86.07:0,86,975	0/0:18,1:19:26.69:0,27,561	1/1:3,9:12:27.01:247,27,0	1/1:3,22:25:65.93:583,66,0	1/1:2,25:27:72.03:659,72,0	1/1:1,16:17:36.02:330,36,0	0/0:24,0:24:54.16:0,54,623	0/0:26,0:26:72.19:0,72,812	0/0:12,1:13:5.66:0,6,319	0/0:22,0:22:57.17:0,57,658	0/1:7,15:22:52.84:333,0,53	1/1:7,23:30:69.03:631,69,0	1/1:0,10:10:30.02:275,30,0
chr10	101334422	.	CTGGCCGCTGGAGGTACCTGCACTCA	C	3722.67	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.547;DP=600;FS=0.845;HRun=0;HaplotypeScore=383.1173;InbreedingCoeff=0.9875;MQ=73.05;MQ0=0;MQRankSum=-6.690;QD=109.49;ReadPosRankSum=2.876;VQSLOD=2.5780;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,11186	0/0:5,0:5:15.05:0,15,1771	0/0:20,0:20:44.11:0,44,2939	0/0:20,0:20:44.87:0,45,2321	0/0:29,0:29:84.29:0,84,7570	0/0:20,0:20:60.21:0,60,5706	0/0:24,0:23:67.46:0,67,6020	0/0:23,0:23:66.23:0,66,5309	0/0:23,0:23:69.24:0,69,7259	0/0:23,0:23:69.24:0,69,6231	0/0:10,0:10:24.08:0,24,2685	1/1:6,12:18:33.11:2253,33,0	1/1:4,12:16:24.08:1470,24,0	0/0:16,0:16:42.14:0,42,4583	0/0:26,0:26:75.26:0,75,7882	0/0:22,0:22:66.23:0,66,6359	0/0:30,0:30:90.31:0,90,8994	0/0:16,0:16:48.16:0,48,4874	0/0:26,0:26:75.26:0,75,5420	0/0:24,0:24:69.24:0,69,5789	0/0:28,0:28:69.24:0,69,7277	0/0:16,0:16:39.13:0,39,3867	0/0:18,0:18:51.18:0,51,5225	0/0:37,0:37:99:0,102,9811	0/0:14,0:14:42.14:0,42,4604	0/0:23,0:23:69.24:0,69,6053	0/0:28,0:28:81.28:0,81,8737	0/0:7,0:7:21.07:0,21,2330
chr10	101335775	.	GTT	G	2119.38	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.162;DP=491;FS=15.041;HRun=13;HaplotypeScore=70.3922;InbreedingCoeff=0.9802;MQ=77.10;MQ0=0;MQRankSum=1.371;QD=20.38;ReadPosRankSum=4.793;VQSLOD=1.3002;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:32:77.59:722,78,0	0/0:6,0:6:18.05:0,18,244	0/0:25,0:17:25.68:0,26,242	0/0:29,0:19:8.80:0,9,73	0/0:25,0:30:62.12:0,62,783	0/0:17,0:17:42.10:0,42,584	0/0:20,0:21:54.17:0,54,749	0/0:25,0:26:66.11:0,66,873	1/1:2,10:13:33.67:305,34,0	0/0:13,0:14:35.60:0,36,469	0/0:16,0:17:44.63:0,45,601	0/0:6,0:9:17.50:0,17,145	0/0:2,0:10:23.98:0,24,214	0/0:8,0:18:36.02:0,36,357	0/0:12,0:12:27.04:0,27,350	1/1:1,12:13:33.05:320,33,0	0/0:26,0:27:57.19:0,57,810	0/0:17,0:18:47.13:0,47,617	0/0:23,0:24:59.67:0,60,800	0/0:17,0:17:20.54:0,21,447	0/0:7,0:7:18.06:0,18,260	1/1:3,10:13:27:262,27,0	1/1:5,10:15:30.01:291,30,0	1/1:0,18:18:42.01:407,42,0	0/0:16,0:16:44.04:0,44,553	0/0:19,0:20:35.61:0,36,483	0/0:12,0:12:32.60:0,33,442	0/0:10,0:11:32.60:0,33,443
chr10	101335973	.	CAG	C	492.31	PASS	AB=0.877;AC=14;AF=0.280;AN=50;BaseQRankSum=3.189;DP=498;FS=5.953;HRun=0;HaplotypeScore=67.6010;InbreedingCoeff=-0.0197;MQ=68.68;MQ0=18;MQRankSum=-0.043;QD=2.38;ReadPosRankSum=0.727;VQSLOD=1.1025;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:3:0,3,26	0/0:6,0:6:3.01:0,3,45	1/1:37,0:18:1.25:3,1,0	0/0:56,0:22:0.47:0,0,1	0/0:11,0:16:18:0,18,175	0/0:17,0:17:9.03:0,9,112	0/0:18,0:18:17.90:0,18,264	./.	./.	0/0:12,0:12:9.02:0,9,117	0/0:11,0:11:6.02:0,6,86	0/0:12,0:12:15.49:0,15,185	0/1:17,2:18:2.45:2,0,314	0/0:15,0:15:3:0,3,26	0/1:15,9:25:14.62:244,0,15	0/0:13,0:13:8.91:0,9,102	0/1:20,3:23:73.48:73,0,180	0/1:12,3:13:20.31:56,0,20	0/1:17,0:18:28.81:29,0,59	0/1:17,2:20:47.01:47,0,103	0/0:26,0:26:18.06:0,18,260	0/0:12,0:12:3:0,3,26	./.	0/0:23,0:23:9.02:0,9,112	0/1:15,0:15:18.94:26,0,19	1/1:9,0:10:5.85:47,6,0	0/1:15,2:17:66.20:66,0,191	1/1:4,2:6:3.01:33,3,0
chr10	101339082	.	AT	A	9110.65	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=13.301;DP=732;FS=1.612;HRun=10;HaplotypeScore=75.3610;InbreedingCoeff=0.9935;MQ=70.96;MQ0=0;MQRankSum=-3.273;QD=22.11;ReadPosRankSum=0.591;VQSLOD=5.6890;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:29:77.96:677,78,0	1/1:0,8:8:24:208,24,0	0/0:12,0:12:24.06:0,24,256	0/0:9,0:9:10.59:0,11,142	0/0:34,1:35:64.19:0,64,935	0/0:33,2:35:44.15:0,44,943	0/0:24,0:25:69.01:0,69,736	1/1:5,27:32:77.97:677,78,0	1/1:2,19:21:44.99:391,45,0	0/0:45,0:45:99:0,114,1249	0/0:23,0:24:66:0,66,697	0/0:20,0:20:48.06:0,48,499	0/0:25,0:25:75.20:0,75,827	0/0:22,0:22:63.13:0,63,683	1/1:2,23:25:65.98:573,66,0	1/1:2,27:29:74.98:651,75,0	0/0:31,0:31:84.21:0,84,918	1/1:1,23:24:65.99:573,66,0	1/1:3,13:16:38.97:333,39,0	1/1:1,27:28:77.98:676,78,0	1/1:2,34:36:98.97:859,99,0	1/1:5,25:31:71.01:605,71,0	1/1:2,25:27:74.98:651,75,0	1/1:2,21:23:62.98:547,63,0	0/0:36,0:37:96.07:0,96,1024	1/1:6,31:37:50.75:670,51,0	1/1:1,28:30:75.34:654,75,0	1/1:2,14:16:41.98:365,42,0
chr10	101339172	.	ATGTGTGTG	A	4003.51	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=3.681;DP=795;FS=2.379;HRun=0;HaplotypeScore=218.1445;InbreedingCoeff=0.8929;MQ=52.73;MQ0=18;MQRankSum=-6.643;QD=25.66;ReadPosRankSum=-0.084;VQSLOD=3.1171;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,8:39:30.30:683,30,0	0/0:9,0:13:20.93:0,21,671	0/0:47,0:12:0.47:0,0,1	0/0:34,0:11:3.01:0,3,45	0/0:18,0:26:29.28:0,29,1139	0/0:26,0:32:81.16:0,81,2413	0/0:32,0:38:69.24:0,69,2360	0/0:30,0:29:39.12:0,39,983	1/1:12,7:19:24.08:582,24,0	0/0:25,0:26:39.13:0,39,1176	0/0:14,0:13:15.05:0,15,516	0/0:30,0:30:26.66:0,27,601	0/0:22,0:26:21.45:0,21,359	0/0:16,0:17:12.57:0,13,204	0/0:24,0:28:63.20:0,63,1897	1/1:12,9:24:44.64:1014,45,0	0/0:29,0:31:66.23:0,66,2242	0/0:20,0:23:26.28:0,26,911	0/0:18,0:15:18.03:0,18,448	0/0:34,0:35:75.24:0,75,2342	0/0:57,0:61:99:0,105,3138	1/1:15,7:23:5.03:593,5,0	1/1:17,6:22:24.08:576,24,0	1/1:24,3:28:16.35:555,16,0	0/0:31,0:33:63.22:0,63,2293	0/0:29,0:31:54.19:0,54,1622	0/0:26,0:28:48.15:0,48,1263	0/0:8,0:8:15.03:0,15,514
chr10	101339456	.	A	AT	10838.12	PASS	AB=0.755;AC=36;AF=0.643;AN=56;BaseQRankSum=-13.979;DP=656;FS=9.097;HRun=9;HaplotypeScore=65.5724;InbreedingCoeff=0.8598;MQ=71.40;MQ0=0;MQRankSum=-2.877;QD=23.98;ReadPosRankSum=1.060;VQSLOD=5.5218;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,34:39:93.25:1029,93,0	0/0:2,0:15:27.32:0,27,87	0/0:18,0:18:26.55:0,27,234	0/0:13,0:13:22.66:0,23,169	0/0:38,0:38:99:0,105,900	0/0:30,0:30:80.70:0,81,685	0/0:21,0:22:56.02:0,56,475	1/1:7,29:38:92.85:952,93,0	1/1:5,17:22:42.07:451,42,0	0/1:18,2:20:12.40:12,0,359	0/0:21,0:21:56.92:0,57,479	1/1:1,18:19:54.13:589,54,0	1/1:2,25:28:72.06:778,72,0	1/1:1,22:23:48.13:531,48,0	1/1:5,23:28:60.16:664,60,0	1/1:5,20:25:23.87:591,24,0	0/0:27,0:27:68.90:0,69,590	1/1:5,13:18:30.08:332,30,0	0/1:7,14:21:7.03:363,0,7	1/1:4,25:29:74.87:807,75,0	1/1:1,18:19:51.14:564,51,0	1/1:0,16:16:40.30:421,40,0	1/1:5,21:26:35.56:531,36,0	1/1:0,14:14:30.08:332,30,0	0/0:20,0:20:50.99:0,51,443	1/1:1,28:29:84.23:929,84,0	1/1:5,22:27:60.16:664,60,0	1/1:0,11:11:27.07:299,27,0
chr10	101339920	.	GTATATATATATATATATATA	G	15964.92	PASS	AB=0.634;AC=34;AF=0.630;AN=54;BaseQRankSum=7.478;DP=329;FS=0.670;HRun=0;HaplotypeScore=189.1623;InbreedingCoeff=0.5973;MQ=54.79;MQ0=1;MQRankSum=-6.164;QD=63.35;ReadPosRankSum=4.097;VQSLOD=4.5311;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,7:14:18.06:842,18,0	1/1:2,0:3:6.02:119,6,0	./.	0/0:9,0:4:6.49:0,6,117	0/0:5,0:5:9.03:0,9,498	0/0:6,0:6:9.03:0,9,616	0/0:2,0:2:3.01:0,3,49	0/0:23,0:23:21.77:0,22,143	1/1:6,9:16:24.08:1223,24,0	0/0:3,0:3:3.01:0,3,194	0/0:2,0:2:3.01:0,3,160	1/1:6,12:19:27.09:1350,27,0	1/1:6,15:22:42.14:2218,42,0	1/1:7,11:18:30.10:1623,30,0	1/1:6,1:11:15.05:560,15,0	1/1:4,8:12:15.05:812,15,0	0/0:12,0:13:27.09:0,27,2185	1/1:3,0:5:3.01:42,3,0	0/1:10,1:18:73.07:424,0,73	1/1:3,1:13:27.09:857,27,0	1/1:3,0:4:3.01:98,3,0	1/1:6,4:10:6.02:325,6,0	1/1:7,14:21:33.11:1707,33,0	1/1:2,2:4:3.01:153,3,0	0/0:6,0:9:15.05:0,15,1005	0/1:5,3:19:30.25:1106,0,30	1/1:12,4:30:48.15:1702,48,0	1/1:4,1:13:7.10:805,7,0
chr10	101340413	.	AGTGC	A	1127.59	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.549;DP=474;FS=7.495;HRun=0;HaplotypeScore=83.4472;InbreedingCoeff=0.9099;MQ=75.06;MQ0=13;MQRankSum=-5.645;QD=10.74;ReadPosRankSum=-0.742;VQSLOD=2.0404;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:6.02:74,6,0	0/0:5,0:5:14.89:0,15,192	0/0:29,0:19:29.26:0,29,358	0/0:28,0:16:31.91:0,32,277	0/0:17,0:17:41.93:0,42,612	0/0:17,0:17:47.98:0,48,726	0/0:14,0:14:0.85:0,1,344	0/0:17,0:17:34.27:0,34,265	1/1:10,1:11:9.03:126,9,0	0/0:11,0:11:30.04:0,30,471	0/0:13,0:13:32.95:0,33,357	0/0:14,0:13:32.89:0,33,524	0/0:11,0:11:26.96:0,27,438	0/0:23,0:22:23.20:0,23,298	0/0:19,0:19:50.94:0,51,769	1/1:6,13:19:27.08:407,27,0	0/0:21,0:21:58.93:0,59,795	0/0:19,0:19:38.93:0,39,561	0/0:14,0:13:27:0,27,346	0/0:16,0:16:38.78:0,39,555	0/0:14,0:13:23.98:0,24,332	1/1:13,1:14:38.75:318,39,0	1/1:21,0:21:14.83:184,15,0	1/1:13,0:13:20.99:195,21,0	0/0:15,0:15:35.96:0,36,514	0/0:17,0:17:39.04:0,39,625	0/0:25,0:25:65.91:0,66,1098	0/0:10,0:10:24.02:0,24,342
chr10	101340417	.	CGTGCGT	C	1397.02	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=3.766;DP=482;FS=3.868;HRun=0;HaplotypeScore=98.0787;InbreedingCoeff=0.9550;MQ=70.82;MQ0=14;MQRankSum=-4.735;QD=12.59;ReadPosRankSum=0.210;VQSLOD=2.5814;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:29:6.02:121,6,0	0/0:5,0:5:14.89:0,15,237	0/0:27,0:17:28.33:0,28,355	0/0:26,0:14:31.74:0,32,276	0/0:15,0:15:41.95:0,42,804	0/0:18,0:18:48.02:0,48,958	0/0:13,0:13:29.44:0,29,513	0/0:17,0:17:41.39:0,41,378	1/1:1,13:14:8.52:146,9,0	0/0:12,0:12:33.05:0,33,638	0/0:12,0:12:32.96:0,33,437	0/0:13,0:12:33.01:0,33,719	0/0:11,0:10:26.97:0,27,594	0/0:22,0:21:23.20:0,23,394	0/0:20,0:20:50.94:0,51,992	1/1:16,2:19:24.52:291,25,0	0/0:23,0:23:51.65:0,52,1058	0/0:19,0:19:47.08:0,47,832	0/0:18,0:17:42.02:0,42,610	0/0:15,0:15:38.78:0,39,731	0/0:17,0:15:27:0,27,475	1/1:13,1:15:41.82:427,42,0	1/1:2,19:21:14.84:348,15,0	1/1:11,1:13:20.99:242,21,0	0/0:16,0:16:41.57:0,42,701	0/0:19,0:19:48.06:0,48,899	0/0:25,0:25:68.88:0,69,1484	0/0:8,0:8:24.05:0,24,474
chr10	101340419	.	TGC	T	959.56	PASS	AB=0.968;AC=17;AF=0.304;AN=56;BaseQRankSum=4.871;DP=494;FS=24.876;HRun=0;HaplotypeScore=72.3625;InbreedingCoeff=0.5666;MQ=69.29;MQ0=15;MQRankSum=-3.915;QD=4.73;ReadPosRankSum=-2.612;VQSLOD=0.5157;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:5.65:46,6,0	0/0:5,0:5:14.89:0,15,152	0/0:26,0:17:28.33:0,28,355	0/0:25,0:13:31.65:0,32,276	0/0:15,0:15:41.92:0,42,468	0/0:20,0:20:29.94:0,30,472	0/0:13,0:13:23.51:0,24,278	0/1:15,2:17:42.47:42,0,201	1/1:14,0:14:8.94:65,9,0	0/0:12,0:12:33.02:0,33,381	0/0:13,0:13:33.83:0,34,312	0/0:14,0:13:27.19:0,27,366	0/0:10,0:9:26.94:0,27,315	0/0:21,0:20:23.16:0,23,184	0/0:21,0:21:50.49:0,50,545	1/1:18,1:19:26.78:192,27,0	0/0:25,0:24:43.06:0,43,568	0/0:19,0:19:35.75:0,36,412	0/1:17,1:17:75.86:76,0,261	0/0:18,0:18:38.74:0,39,373	0/1:20,0:18:12.88:13,0,264	1/1:16,0:16:44.71:349,45,0	1/1:19,0:19:14.84:115,15,0	1/1:13,0:13:20.94:167,21,0	0/1:18,0:18:1.75:2,0,388	0/1:19,0:19:78.47:78,0,387	0/0:25,0:25:65.89:0,66,737	0/0:8,0:8:14.64:0,15,204
chr10	101340421	.	C	CGT	1396.26	PASS	AB=0.920;AC=20;AF=0.385;AN=52;BaseQRankSum=-2.978;DP=539;FS=0.716;HRun=0;HaplotypeScore=89.2458;InbreedingCoeff=0.1481;MQ=66.68;MQ0=16;MQRankSum=0.892;QD=5.19;ReadPosRankSum=-0.718;VQSLOD=2.7427;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:6.77:0,7,28	1/1:5,0:5:5.99:49,6,0	./.	./.	0/0:16,0:16:12.03:0,12,130	0/0:21,0:22:8.85:0,9,79	0/0:15,0:16:17.78:0,18,159	1/1:23,0:23:19.08:163,19,0	0/0:14,0:14:6.65:0,7,32	0/0:13,0:13:6.01:0,6,65	0/1:15,0:15:17.05:17,0,28	0/0:14,0:14:11.59:0,12,91	0/0:9,0:8:12.03:0,12,130	1/1:6,2:24:9.01:97,9,0	0/1:20,2:22:17.60:122,0,18	0/0:19,0:19:21.34:0,21,114	0/0:25,0:25:10.62:0,11,167	0/1:21,1:22:75.42:81,0,75	0/1:22,0:21:14.83:103,0,15	0/1:13,7:20:20.49:122,0,20	0/1:22,0:20:48.70:55,0,49	1/1:19,0:18:2.35:25,2,0	0/0:19,0:19:13.86:0,14,68	0/0:15,0:15:0.14:0,0,20	0/1:16,0:16:28.67:29,0,111	1/1:13,9:22:27.60:300,28,0	0/1:17,9:26:99:276,0,106	1/1:5,4:10:0.69:122,1,0
chr10	101340884	.	GT	G	1207.47	PASS	AB=0.964;AC=20;AF=0.357;AN=56;BaseQRankSum=10.315;DP=496;FS=1.504;HRun=11;HaplotypeScore=58.3258;InbreedingCoeff=0.8696;MQ=67.32;MQ0=1;MQRankSum=2.036;QD=7.94;ReadPosRankSum=2.297;VQSLOD=2.0686;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,15:18:29.90:240,30,0	0/0:9,0:9:24.02:0,24,243	0/0:21,0:18:26.55:0,27,208	0/0:8,0:8:0.84:0,1,33	0/0:21,0:21:51.11:0,51,534	0/0:16,1:17:14.47:0,14,353	0/0:15,0:15:36.09:0,36,380	0/0:32,0:35:83.99:0,84,844	1/1:4,12:16:29.95:246,30,0	0/0:19,0:19:51.13:0,51,543	0/0:15,0:15:30.08:0,30,320	1/1:3,0:15:24.44:71,24,0	1/1:2,0:21:31.02:90,31,0	1/1:5,0:23:31.77:97,32,0	0/0:22,0:22:51.13:0,51,544	1/1:3,11:14:31.93:245,32,0	0/0:24,0:24:45.11:0,45,475	0/0:16,0:16:41.98:0,42,404	0/0:22,3:23:20.31:0,20,405	0/0:14,0:14:39.09:0,39,409	0/1:11,1:12:0.73:1,0,175	1/1:1,6:7:17.98:148,18,0	1/1:0,10:10:20.98:172,21,0	1/1:2,4:7:14.01:104,14,0	0/0:13,1:14:36.08:0,36,377	0/0:29,2:31:37.93:0,38,807	0/0:34,3:37:62.52:0,63,843	0/1:6,0:5:0.76:1,0,84
chr10	101344514	.	TC	T	495.09	PASS	AC=4;AF=0.222;AN=18;BaseQRankSum=-0.591;DP=381;FS=0.000;HRun=1;HaplotypeScore=30.9310;MQ=11.14;MQ0=329;MQRankSum=2.406;QD=11.79;ReadPosRankSum=2.681;VQSLOD=1.8799;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:5,0:1:3.01:0,3,48	./.	./.	0/0:18,0:5:12.04:0,12,186	./.	./.	./.	./.	0/0:16,0:2:6.02:0,6,96	0/0:16,0:7:18.06:0,18,281	./.	./.	./.	./.	./.	./.	./.	./.	1/1:1,27:15:39.13:544,39,0	./.	0/0:14,0:2:6.02:0,6,92	0/0:14,0:6:15.05:0,15,237	./.	0/0:13,0:8:21.07:0,21,332	1/1:3,11:1:3.01:42,3,0	./.	./.
chr10	101346289	.	GA	G	8517.62	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=17.223;DP=595;FS=0.318;HRun=8;HaplotypeScore=108.4818;InbreedingCoeff=0.9990;MQ=76.23;MQ0=0;MQRankSum=-5.587;QD=24.76;ReadPosRankSum=1.490;VQSLOD=4.5379;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:48.08:457,48,0	1/1:0,11:11:30.04:285,30,0	0/0:17,0:17:23.67:0,24,345	0/0:20,0:17:23.39:0,23,233	0/0:29,0:29:78.21:0,78,919	0/0:26,0:26:75.20:0,75,875	0/0:23,0:23:63.13:0,63,722	1/1:13,20:33:72.07:677,72,0	1/1:3,23:26:69.11:656,69,0	0/0:22,0:22:60.18:0,60,725	0/0:27,0:27:81.25:0,81,979	1/1:5,19:24:60.08:565,60,0	1/1:4,22:26:66.06:619,66,0	1/1:5,12:17:39.04:365,39,0	1/1:7,22:29:69.10:655,69,0	1/1:3,9:12:33.02:302,33,0	0/0:26,0:26:69.16:0,69,787	1/1:3,11:14:36.01:333,36,0	1/1:4,13:17:51.06:475,51,0	1/1:0,23:23:69.11:656,69,0	1/1:4,14:18:45.05:427,45,0	0/0:10,0:10:27.08:0,27,326	0/0:22,0:22:60.16:0,60,700	0/0:17,0:17:48.15:0,48,580	0/0:12,0:12:33.09:0,33,389	1/1:0,31:31:93.15:884,93,0	1/1:7,25:32:87.04:802,87,0	1/1:2,11:13:39.01:356,39,0
chr10	101346330	.	ATT	A	9296.78	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=14.886;DP=563;FS=1.081;HRun=10;HaplotypeScore=113.5697;InbreedingCoeff=0.9957;MQ=69.01;MQ0=1;MQRankSum=-9.142;QD=28.17;ReadPosRankSum=2.355;VQSLOD=4.7580;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:63.16:701,63,0	1/1:3,5:8:15.03:167,15,0	0/0:18,0:17:19.60:0,20,322	0/0:16,1:12:21.72:0,22,205	0/0:29,0:30:86.78:0,87,1330	0/0:21,0:21:54.17:0,54,836	0/0:17,0:18:50.66:0,51,766	1/1:4,19:23:57.13:635,57,0	1/1:3,20:23:54.13:600,54,0	0/0:23,0:23:60.20:0,60,932	0/0:24,0:24:60.19:0,60,928	1/1:1,20:21:57.15:634,57,0	1/1:1,23:24:66.18:735,66,0	1/1:5,13:18:39.07:426,39,0	1/1:3,14:17:51.14:568,51,0	1/1:1,15:16:42.11:467,42,0	0/0:23,0:24:68.71:0,69,1017	1/1:2,13:15:42.09:457,42,0	1/1:4,16:21:42.02:526,42,0	1/1:3,25:28:72.17:802,72,0	1/1:4,7:11:21.05:234,21,0	0/0:10,0:10:27.08:0,27,407	0/0:17,0:17:39.13:0,39,619	0/0:16,0:16:48.16:0,48,762	0/0:14,0:14:42.14:0,42,667	1/1:5,34:38:99:1107,102,0	1/1:1,28:29:81.22:903,81,0	1/1:3,10:13:30.05:334,30,0
chr10	101346738	.	GCA	G	1889.72	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.046;DP=609;FS=2.674;HRun=0;HaplotypeScore=69.0587;InbreedingCoeff=0.9989;MQ=78.49;MQ0=1;MQRankSum=-0.967;QD=33.15;ReadPosRankSum=4.439;VQSLOD=5.9738;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,2078	0/0:10,0:10:30.10:0,30,562	0/0:12,0:12:36.08:0,36,596	0/0:17,0:17:48.16:0,48,839	0/0:24,0:24:66.23:0,66,1226	0/0:16,0:16:48.15:0,48,868	0/0:21,0:21:57.20:0,57,1068	0/0:29,0:29:87.30:0,87,1622	0/0:23,0:23:69.24:0,69,1293	0/0:34,0:34:99:0,102,1906	0/0:30,0:30:81.28:0,81,1516	1/1:0,20:20:54.18:795,54,0	1/1:1,13:13:24.08:353,24,0	1/1:0,23:23:60.20:884,60,0	0/0:31,0:31:93.32:0,93,1732	0/0:21,0:21:63.22:0,63,1172	0/0:32,0:32:96.31:0,96,1765	0/0:18,0:18:54.19:0,54,1011	0/0:24,0:24:66.23:0,66,1230	0/0:25,0:25:75.26:0,75,1395	0/0:27,0:27:81.28:0,81,1502	0/0:19,0:19:57.20:0,57,1067	0/0:17,0:17:51.17:0,51,947	0/0:18,0:18:54.19:0,54,1001	0/0:17,0:17:48.16:0,48,899	0/0:18,0:18:54.19:0,54,1011	0/0:19,0:19:51.17:0,51,935	0/0:12,0:12:33.11:0,33,618
chr10	101348445	.	CGAGAGA	C	189.36	PASS	AB=1.000;AC=9;AF=0.173;AN=52;BaseQRankSum=2.843;DP=659;FS=13.950;HRun=0;HaplotypeScore=118.3044;InbreedingCoeff=0.4687;MQ=68.13;MQ0=41;MQRankSum=-1.857;QD=2.25;ReadPosRankSum=1.134;VQSLOD=1.7613;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:38.16:0,38,833	0/0:8,0:8:3.01:0,3,50	0/0:81,0:33:0:0,0,0	0/0:96,0:21:0:0,0,0	0/0:25,0:25:5.99:0,6,49	0/0:17,0:17:9.03:0,9,190	0/0:18,0:18:15.03:0,15,286	./.	0/0:11,0:11:13.11:0,13,87	0/0:26,0:26:15.04:0,15,243	0/0:19,0:22:3.07:0,3,18	0/0:21,0:21:14.08:0,14,235	0/0:11,0:11:15.02:0,15,284	0/1:10,0:10:14.95:65,0,15	1/1:20,8:28:3.01:38,3,0	0/0:11,0:11:12.04:0,12,272	0/0:19,0:18:11.07:0,11,237	0/0:17,0:17:7.58:0,8,148	0/0:18,0:18:4.23:0,4,15	./.	1/1:18,0:21:3.07:12,3,0	0/0:14,0:14:12.03:0,12,198	0/0:16,0:16:0.47:0,0,1	0/0:25,0:25:39:0,39,913	0/0:21,0:21:17.91:0,18,379	0/0:22,0:22:3.90:0,4,55	1/1:16,1:19:12.51:189,13,0	1/1:6,0:6:1.82:5,2,0
chr10	101349322	.	G	GT	1757.44	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.410;DP=651;FS=4.140;HRun=6;HaplotypeScore=65.0102;InbreedingCoeff=0.9993;MQ=83.03;MQ0=0;MQRankSum=-1.695;QD=30.83;ReadPosRankSum=1.490;VQSLOD=4.4248;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.17:0,81,820	0/0:12,0:12:36.08:0,36,367	0/0:24,0:21:31.06:0,31,346	0/0:23,0:22:42.92:0,43,419	0/0:46,0:46:99:0,126,1268	0/0:23,0:23:66.08:0,66,645	0/0:17,0:17:42.09:0,42,428	0/0:40,0:40:93.14:0,93,912	0/0:17,0:17:48.11:0,48,489	0/0:35,0:35:87.08:0,87,856	0/0:24,0:24:66.13:0,66,662	1/1:4,17:21:57.18:711,57,0	1/1:0,17:18:51.12:623,51,0	1/1:1,17:18:45.14:566,45,0	0/0:23,0:23:66.07:0,66,639	0/0:18,0:18:54.09:0,54,532	0/0:32,0:32:87.12:0,87,863	0/0:12,0:12:33.07:0,33,336	0/0:17,0:17:48.07:0,48,473	0/0:46,0:46:99:0,132,1325	0/0:9,0:9:27.05:0,27,270	0/0:36,0:36:99:0,99,995	0/0:24,0:24:66.13:0,66,667	0/0:13,0:13:39.07:0,39,391	0/0:16,0:16:45.09:0,45,452	0/0:16,0:16:48.11:0,48,490	0/0:28,0:28:81.17:0,81,819	0/0:14,0:14:42.07:0,42,419
chr10	101349624	.	T	TA	10957.72	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-16.259;DP=626;FS=1.390;HRun=8;HaplotypeScore=54.3171;InbreedingCoeff=0.9021;MQ=76.09;MQ0=0;MQRankSum=-1.692;QD=28.91;ReadPosRankSum=1.513;VQSLOD=5.0569;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,36:40:96.29:1108,96,0	1/1:1,8:9:24.07:277,24,0	0/0:15,0:15:33:0,33,298	0/1:10,0:10:18.34:18,0,116	0/0:41,0:41:99:0,111,1016	0/0:18,0:18:51.03:0,51,467	0/0:21,0:21:54.01:0,54,489	1/1:4,40:44:99:1308,120,0	1/1:3,24:27:72.21:831,72,0	0/0:36,0:36:96.03:0,96,874	0/0:16,0:16:38.98:0,39,345	1/1:1,22:23:57.17:658,57,0	1/1:1,23:24:63.19:727,63,0	1/1:1,25:26:75.22:865,75,0	1/1:0,28:28:72.21:831,72,0	1/1:1,23:24:63.19:727,63,0	0/0:15,0:15:38.99:0,39,350	1/1:0,10:10:30.09:346,30,0	1/1:2,18:20:54.16:623,54,0	1/1:2,23:25:69.63:783,70,0	1/1:0,7:7:21.06:242,21,0	0/0:20,0:20:57.03:0,57,522	0/0:27,0:27:69:0,69,621	0/0:14,0:14:30.01:0,30,274	0/0:24,0:23:63.01:0,63,571	1/1:5,25:30:75.18:851,75,0	1/1:6,25:31:63.19:727,63,0	1/1:0,1:1:3.01:35,3,0
chr10	101353918	.	A	AAAAAAAAG	3494.80	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=1.552;DP=315;FS=16.335;HRun=0;HaplotypeScore=73.9698;InbreedingCoeff=0.9510;MQ=61.17;MQ0=4;MQRankSum=-8.965;QD=68.53;ReadPosRankSum=0.454;VQSLOD=2.0274;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,4:11:18.06:716,18,0	0/0:3,0:3:9.03:0,9,228	0/0:12,0:9:26.91:0,27,484	0/0:4,0:4:11.87:0,12,242	0/0:13,0:13:36.11:0,36,860	0/0:10,0:10:24.08:0,24,577	0/0:11,0:10:10.50:0,11,591	0/0:22,0:21:63.18:0,63,1360	1/1:3,4:9:18.06:733,18,0	0/0:12,0:12:33.11:0,33,817	0/0:14,0:14:39.12:0,39,870	1/1:0,1:6:15.05:541,15,0	1/1:2,0:10:15.05:540,15,0	1/1:4,1:8:12.03:359,12,0	0/0:11,0:11:30.08:0,30,659	1/1:1,4:6:15.05:606,15,0	0/0:13,0:13:33.57:0,34,746	0/0:19,0:16:48.16:0,48,1212	0/0:8,0:8:18.03:0,18,356	0/0:12,0:12:33.10:0,33,738	0/0:15,0:15:42.13:0,42,1013	0/0:10,0:9:27.08:0,27,634	0/0:13,0:12:33.11:0,33,836	0/0:10,0:9:27.09:0,27,653	0/0:13,0:13:36.11:0,36,835	0/0:15,0:15:42.14:0,42,1008	0/0:13,0:13:33.09:0,33,735	0/0:11,0:11:33.11:0,33,766
chr10	101354432	.	AG	A	1087.39	PASS	AB=0.993;AC=14;AF=0.250;AN=56;BaseQRankSum=7.187;DP=648;FS=5.761;HRun=4;HaplotypeScore=95.5081;InbreedingCoeff=0.4839;MQ=81.78;MQ0=0;MQRankSum=-2.106;QD=4.63;ReadPosRankSum=0.140;VQSLOD=-0.2540;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:40.59:226,41,0	1/1:0,12:12:30.09:359,30,0	0/0:28,0:22:49.66:0,50,559	0/0:27,0:24:13.35:0,13,415	0/0:36,0:36:99:0,102,1348	0/0:28,0:28:81.24:0,81,1098	0/0:22,0:22:66.19:0,66,886	0/1:38,0:37:29.78:30,0,121	1/1:28,0:28:56.79:308,57,0	0/0:27,0:27:75.23:0,75,1001	0/0:20,0:20:54.14:0,54,687	0/0:21,0:21:17.17:0,17,117	0/1:19,0:19:4.65:5,0,93	0/0:24,0:24:56.37:0,56,194	0/0:17,0:17:40.98:0,41,137	1/1:25,0:25:61.70:289,62,0	0/0:21,0:20:63.07:0,63,762	0/0:23,0:23:32.65:0,33,163	0/1:23,0:23:7.85:8,0,80	0/0:21,0:21:50.18:0,50,181	0/1:22,1:23:3.93:4,0,125	0/0:19,0:19:51.16:0,51,689	0/0:17,0:17:51.17:0,51,710	0/0:22,0:22:57.18:0,57,780	0/0:13,0:13:39.12:0,39,527	0/0:26,0:25:6.02:0,6,117	0/1:31,0:31:2.36:2,0,155	0/1:9,0:9:27.44:27,0,31
chr10	101354435	.	G	GA	1908.70	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-0.238;DP=642;FS=7.035;HRun=0;HaplotypeScore=94.4287;InbreedingCoeff=0.9203;MQ=83.16;MQ0=0;MQRankSum=-0.420;QD=23.28;ReadPosRankSum=1.992;VQSLOD=4.9057;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:32.51:634,33,0	0/0:12,0:12:23.71:0,24,82	0/0:29,0:23:25.65:0,26,635	0/0:29,0:25:34.84:0,35,516	0/0:36,0:36:99:0,105,1441	0/0:27,0:27:81.27:0,81,1131	0/0:22,0:22:66.19:0,66,887	0/0:33,0:32:60.15:0,60,384	1/1:4,25:29:49.44:684,49,0	0/0:26,0:26:78.26:0,78,1074	0/0:20,0:20:56.78:0,57,757	0/0:19,0:19:51.91:0,52,281	0/0:18,0:18:1.16:0,1,197	0/0:23,0:23:66.52:0,67,359	0/0:18,0:18:51.39:0,51,267	1/1:0,25:25:66.18:732,66,0	0/0:21,0:20:63.17:0,63,855	0/0:24,0:24:60.90:0,61,332	0/0:23,0:23:54.03:0,54,271	0/0:22,0:22:62.66:0,63,338	0/0:23,0:23:63.54:0,64,344	0/0:18,0:18:51.17:0,51,702	0/0:17,0:17:51.17:0,51,712	0/0:21,0:21:63.19:0,63,847	0/0:13,0:13:39.13:0,39,541	0/0:28,0:27:73.51:0,74,364	0/0:30,0:30:78.37:0,78,432	0/0:8,0:8:18.76:0,19,98
chr10	101356265	.	GTCTCT	G	8240.14	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=10.626;DP=972;FS=2.863;HRun=0;HaplotypeScore=228.1142;InbreedingCoeff=0.9936;MQ=80.53;MQ0=3;MQRankSum=-9.389;QD=32.57;ReadPosRankSum=0.997;VQSLOD=4.4781;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,157,4629	0/0:13,0:13:39.13:0,39,1045	0/0:73,0:61:99:0,140,2821	0/0:101,0:74:99:0,155,2804	0/0:31,0:31:90.30:0,90,2482	0/0:28,0:28:81.28:0,81,2278	0/0:38,0:38:99:0,99,2635	1/1:4,27:31:75.21:1310,75,0	0/0:33,0:33:89.33:0,89,2436	0/0:36,0:36:99:0,102,2807	0/0:22,0:22:63.21:0,63,1610	0/0:30,0:30:84.29:0,84,2364	0/0:35,0:35:99:0,102,3061	0/0:33,0:33:99:0,99,2796	1/1:5,38:43:63.22:1305,63,0	0/0:30,0:30:87.30:0,87,2533	0/0:34,0:34:99:0,102,2938	1/1:2,13:14:15.05:311,15,0	1/1:3,15:18:42.14:790,42,0	1/1:1,21:22:18.06:350,18,0	1/1:10,33:43:14.79:310,15,0	0/0:31,0:31:93.30:0,93,2475	0/0:20,0:20:60.21:0,60,1628	0/0:51,0:51:99:0,144,4191	0/0:21,0:21:60.21:0,60,1734	1/1:1,29:30:87.24:1601,87,0	1/1:2,30:32:60.67:1208,61,0	1/1:0,19:19:51.18:1056,51,0
chr10	101357893	.	GTGATGA	G	3172.69	PASS	AB=1.000;AC=31;AF=0.596;AN=52;BaseQRankSum=-1.847;DP=587;FS=0.000;HRun=0;HaplotypeScore=165.8151;InbreedingCoeff=0.7905;MQ=72.90;MQ0=9;MQRankSum=-8.056;QD=9.70;ReadPosRankSum=-1.210;VQSLOD=2.6163;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,10:33:5.93:77,6,0	0/0:3,0:5:3.01:0,3,78	./.	./.	0/0:11,0:21:27.77:0,28,808	0/0:21,0:30:30.09:0,30,691	0/0:14,0:19:12.02:0,12,277	1/1:23,0:23:8.87:58,9,0	1/1:10,8:18:12.04:240,12,0	0/0:17,0:24:27.97:0,28,665	0/1:6,0:11:1.66:2,0,72	1/1:10,9:19:24.08:480,24,0	1/1:12,7:19:11.77:240,12,0	1/1:10,0:16:9.03:126,9,0	1/1:12,9:21:17.98:317,18,0	1/1:13,16:29:38.97:763,39,0	0/0:11,0:21:30.10:0,30,787	1/1:17,7:23:6.02:120,6,0	1/1:19,4:21:9.03:165,9,0	1/1:8,8:16:12.01:208,12,0	1/1:25,10:35:0.47:2,0,0	0/0:12,0:17:21.06:0,21,512	0/0:13,0:23:29.93:0,30,772	0/0:9,0:19:21.75:0,22,624	0/0:14,0:16:23.86:0,24,549	1/1:9,4:13:15.02:228,15,0	1/1:11,6:17:15.05:300,15,0	1/1:8,0:8:3.01:42,3,0
chr10	101358287	.	C	CTCTA	3010.55	PASS	AB=1.000;AC=42;AF=0.913;AN=46;BaseQRankSum=-3.320;DP=389;FS=4.586;HRun=0;HaplotypeScore=127.8759;InbreedingCoeff=0.3174;MQ=66.85;MQ0=2;MQRankSum=-0.885;QD=9.12;ReadPosRankSum=1.328;VQSLOD=2.9455;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:0.35:0,0,1	1/1:6,0:6:2.98:21,3,0	./.	./.	1/1:4,10:16:18.06:430,18,0	0/0:16,1:17:36.07:0,36,377	./.	1/1:38,0:38:17.89:150,18,0	1/1:14,0:14:1.36:3,1,0	1/1:6,12:21:48.06:865,48,0	1/1:4,7:12:12.04:287,12,0	1/1:14,0:14:0.89:2,1,0	1/1:15,0:15:7.30:46,7,0	1/1:13,0:13:2.99:24,3,0	./.	0/1:13,0:13:1.63:19,0,2	1/1:3,14:17:12.04:286,12,0	1/1:11,0:11:6.83:43,7,0	1/1:11,0:10:5.94:41,6,0	1/1:12,0:12:2.96:19,3,0	./.	1/1:6,9:15:12.04:287,12,0	1/1:16,3:19:2.55:218,3,0	1/1:4,4:8:6.02:143,6,0	1/1:9,3:13:3.01:72,3,0	1/1:13,0:13:11.87:80,12,0	1/1:16,0:16:6.39:40,6,0	1/1:15,0:14:5.93:40,6,0
chr10	101358317	.	CTATG	C	1300.73	PASS	AB=0.937;AC=35;AF=0.761;AN=46;BaseQRankSum=0.750;DP=261;FS=2.647;HRun=0;HaplotypeScore=90.9888;InbreedingCoeff=0.2832;MQ=50.86;MQ0=4;MQRankSum=-3.098;QD=6.41;ReadPosRankSum=-3.225;VQSLOD=1.3655;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:9:0.20:1,0,0	1/1:3,0:3:2.92:17,3,0	./.	./.	0/1:19,0:19:5.17:5,0,338	0/0:17,0:17:21.12:0,21,572	./.	1/1:31,0:28:60.94:422,61,0	1/1:8,0:8:8.96:68,9,0	0/1:22,0:22:99:146,0,233	0/1:10,0:10:1.41:1,0,73	1/1:7,0:7:8.97:71,9,0	1/1:9,0:9:11.91:89,12,0	1/1:8,0:8:5.99:49,6,0	./.	1/1:7,0:7:6.42:64,6,0	0/0:15,0:15:4.75:0,5,117	1/1:5,0:5:5.87:36,6,0	1/1:6,0:5:6.41:42,6,0	1/1:7,0:7:2.94:18,3,0	./.	1/1:10,0:10:10.98:50,11,0	0/1:7,6:13:16.78:177,0,17	1/1:5,0:5:5.60:25,6,0	0/0:11,0:11:2.29:0,2,137	1/1:6,0:6:11.88:81,12,0	1/1:9,0:9:5.81:36,6,0	1/1:9,0:9:5.39:39,5,0
chr10	101358327	.	ATC	A	85.78	PASS	AC=8;AF=0.174;AN=46;BaseQRankSum=3.528;DP=216;FS=0.000;HRun=0;HaplotypeScore=79.3103;InbreedingCoeff=0.5487;MQ=45.74;MQ0=6;MQRankSum=-1.588;QD=3.18;ReadPosRankSum=-0.970;VQSLOD=1.8995;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:9:0.47:1,0,0	0/0:3,0:3:3.01:0,3,35	./.	./.	0/0:16,0:16:35.96:0,36,684	0/0:18,0:18:45.02:0,45,868	./.	0/0:22,0:17:33.26:0,33,353	1/1:5,2:7:9.01:92,9,0	0/0:18,0:18:53.40:0,53,960	0/0:9,0:9:15.04:0,15,250	1/1:4,1:5:6.01:64,6,0	1/1:5,1:6:3.01:39,3,0	./.	0/0:2,0:2:3.01:0,3,49	0/0:5,0:5:2.68:0,3,12	0/0:12,0:12:20.78:0,21,381	0/0:5,0:5:9.03:0,9,113	0/0:4,0:3:9.03:0,9,134	0/0:5,0:5:2.60:0,3,36	./.	0/0:6,0:6:12.04:0,12,218	0/0:13,0:13:19.91:0,20,257	0/0:5,0:5:6.02:0,6,109	0/0:11,0:11:20.91:0,21,401	0/0:4,0:4:12.04:0,12,150	0/0:6,0:6:11.86:0,12,118	0/0:7,0:7:6.02:0,6,81
chr10	101358381	.	CTA	C	641.36	PASS	AB=0.923;AC=17;AF=0.425;AN=40;BaseQRankSum=5.675;DP=257;FS=12.704;HRun=0;HaplotypeScore=72.3416;InbreedingCoeff=0.5561;MQ=80.17;MQ0=7;MQRankSum=-4.717;QD=9.03;ReadPosRankSum=-0.392;VQSLOD=2.1397;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:31,0:15:8.28:0,8,112	0/0:59,0:19:5.20:0,5,130	0/0:17,0:17:36.11:0,36,575	0/0:11,0:11:27.09:0,27,440	0/0:1,0:1:3.01:0,3,49	1/1:1,0:17:18.06:219,18,0	./.	0/0:8,0:8:9.03:0,9,145	0/0:5,0:5:9.03:0,9,145	1/1:0,5:5:3.01:36,3,0	./.	./.	0/0:1,4:5:0.47:0,0,1	1/1:6,0:6:3.01:37,3,0	0/0:9,0:9:20.93:0,21,342	1/1:3,0:3:3.01:37,3,0	1/1:1,0:1:2.74:12,3,0	1/1:2,6:8:3.01:34,3,0	0/0:1,1:2:0:0,0,0	./.	0/0:4,0:4:12.04:0,12,195	./.	0/1:11,1:12:12.84:13,0,310	1/1:1,7:8:24.07:285,24,0	1/1:2,8:10:9.03:109,9,0	./.
chr10	101358383	.	A	ATC	674.12	PASS	AC=18;AF=0.450;AN=40;BaseQRankSum=6.103;DP=262;FS=2.985;HRun=0;HaplotypeScore=75.8123;InbreedingCoeff=0.6609;MQ=80.91;MQ0=7;MQRankSum=-5.321;QD=10.06;ReadPosRankSum=0.116;VQSLOD=3.2635;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:31,0:15:4.76:0,5,122	0/0:63,0:21:23.56:0,24,184	0/0:16,0:16:42.11:0,42,597	0/0:12,0:12:30.08:0,30,436	0/0:1,0:1:3.01:0,3,44	1/1:18,0:17:18.06:220,18,0	./.	0/0:7,0:7:18.03:0,18,213	0/0:4,0:4:9.03:0,9,137	1/1:5,0:5:3.01:36,3,0	./.	./.	1/1:5,0:5:2.50:9,2,0	1/1:0,6:6:3.01:37,3,0	0/0:9,0:9:9.25:0,9,328	1/1:1,2:3:3.01:37,3,0	0/0:1,0:1:2.74:0,3,12	1/1:6,2:8:3.01:34,3,0	1/1:2,0:2:0.47:1,0,0	./.	0/0:4,0:4:12.04:0,12,182	./.	0/0:11,0:11:29.94:0,30,382	1/1:7,1:8:24.07:304,24,0	1/1:12,0:12:12.04:141,12,0	./.
chr10	101358526	.	TC	T	4329.78	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=6.366;DP=460;FS=0.418;HRun=4;HaplotypeScore=115.2617;InbreedingCoeff=0.9360;MQ=64.01;MQ0=0;MQRankSum=-8.606;QD=25.77;ReadPosRankSum=-1.151;VQSLOD=3.1566;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.16:0,60,813	0/0:11,0:11:33.11:0,33,462	0/0:13,0:12:30.09:0,30,386	0/0:2,0:2:5.93:0,6,40	0/0:14,0:14:42.14:0,42,587	0/0:25,0:25:72.23:0,72,986	0/0:16,0:16:48.16:0,48,672	1/1:8,31:39:78.17:898,78,0	0/0:12,0:12:36.12:0,36,504	0/0:12,0:12:30.10:0,30,418	0/0:19,0:19:57.19:0,57,798	0/0:16,0:16:36.06:0,36,454	0/0:23,0:23:69.23:0,69,961	0/0:21,0:21:60.11:0,60,795	1/1:3,12:15:33.10:395,33,0	0/0:13,0:13:30.10:0,30,419	0/0:24,0:24:69.23:0,69,966	1/1:0,2:2:6.02:72,6,0	1/1:5,11:16:36.09:413,36,0	1/1:1,37:38:75.23:899,75,0	1/1:0,2:2:3.01:36,3,0	0/0:6,0:6:15.05:0,15,210	0/0:14,0:14:39.12:0,39,528	0/0:11,0:11:33.10:0,33,444	0/0:17,0:17:42.14:0,42,588	1/1:1,20:21:57.17:683,57,0	1/1:2,21:23:51.16:610,51,0	1/1:3,9:12:27.08:324,27,0
chr10	101358548	.	AT	A	8794.94	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=16.348;DP=412;FS=18.322;HRun=1;HaplotypeScore=88.6073;InbreedingCoeff=0.9326;MQ=61.97;MQ0=0;MQRankSum=-6.907;QD=35.61;ReadPosRankSum=-1.406;VQSLOD=2.8719;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:60.19:778,60,0	1/1:0,13:13:39.13:506,39,0	0/0:6,0:6:15.05:0,15,230	0/0:3,0:3:0.66:0,1,45	0/0:15,0:15:45.15:0,45,719	0/0:26,0:26:78.27:0,78,1247	0/0:22,0:22:66.23:0,66,1055	1/1:0,25:25:63.16:817,63,0	1/1:0,10:10:30.10:389,30,0	0/0:10,0:10:30.10:0,30,480	0/0:17,0:17:51.16:0,51,793	1/1:1,9:10:30.08:373,30,0	1/1:4,18:22:60.18:763,60,0	1/1:0,21:21:63.20:817,63,0	1/1:0,13:13:39.07:486,39,0	1/1:0,18:18:48.16:623,48,0	0/0:23,0:23:69.21:0,69,1064	1/1:1,2:3:3.01:39,3,0	1/1:0,10:10:27.09:349,27,0	1/1:2,29:31:93.16:1132,93,0	1/1:0,5:5:12.04:155,12,0	0/0:6,0:6:18.06:0,18,288	0/0:14,0:14:42.13:0,42,648	0/0:10,0:10:30.10:0,30,480	0/0:13,0:13:39.13:0,39,624	1/1:3,18:21:57.18:718,57,0	1/1:0,17:17:48.16:618,48,0	1/1:0,7:7:17.61:233,18,0
chr10	101359730	.	G	GGGTTATTCTTCATTCGTC	21487.63	PASS	AC=30;AF=0.556;AN=54;BaseQRankSum=-8.489;DP=348;FS=2.742;HRun=0;HaplotypeScore=135.5905;InbreedingCoeff=0.9320;MQ=88.33;MQ0=0;MQRankSum=-11.687;QD=142.30;ReadPosRankSum=2.976;VQSLOD=4.9857;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:3:3.01:248,3,0	1/1:0,6:6:18.06:1606,18,0	0/0:17,0:17:51.05:0,51,1835	0/0:13,0:13:38.53:0,39,905	0/0:26,0:26:75.23:0,75,3610	0/0:18,0:18:54.17:0,54,2457	0/0:11,0:11:30.10:0,30,1408	1/1:18,0:18:54.06:2772,54,0	1/1:0,0:7:12.04:993,12,0	0/0:13,0:12:36.06:0,36,1558	0/0:19,0:19:57.18:0,57,2674	1/1:0,0:11:21.07:1743,21,0	1/1:0,0:11:24.08:1989,24,0	1/1:1,5:9:15.05:1338,15,0	1/1:0,4:8:12.04:1070,12,0	1/1:0,0:10:15.05:1240,15,0	0/0:23,0:23:69.24:0,69,3177	1/1:0,3:8:9.03:804,9,0	1/1:0,1:5:14.99:618,15,0	1/1:0,7:15:21.07:1654,21,0	./.	0/0:7,0:7:21.04:0,21,877	0/0:16,0:16:45.15:0,45,2213	0/0:10,0:10:30.10:0,30,1477	0/0:24,0:24:72.23:0,72,3488	1/1:0,12:17:45.15:3623,45,0	1/1:0,6:19:18.53:1607,19,0	1/1:2,0:2:6.01:182,6,0
chr10	101359897	.	T	TA	8147.52	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=14.048;DP=404;FS=4.691;HRun=2;HaplotypeScore=69.3707;InbreedingCoeff=0.9845;MQ=86.98;MQ0=0;MQRankSum=-3.323;QD=36.37;ReadPosRankSum=2.086;VQSLOD=5.6195;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:33.11:475,33,0	1/1:0,7:7:21.07:302,21,0	0/0:21,0:21:57.16:0,57,697	0/0:12,0:12:30.09:0,30,361	0/0:18,0:18:51.16:0,51,632	0/0:17,0:17:51.16:0,51,632	0/0:9,0:9:27.08:0,27,335	1/1:0,19:19:48.15:668,48,0	1/1:0,8:8:21.07:301,21,0	0/0:17,0:17:51.14:0,51,596	0/0:24,0:24:63.18:0,63,768	1/1:2,9:11:27.09:380,27,0	1/1:0,11:11:33.11:473,33,0	1/1:0,13:13:36.12:518,36,0	1/1:0,9:9:24.08:345,24,0	1/1:0,14:14:36.12:518,36,0	0/0:18,0:18:51.11:0,51,600	1/1:1,16:17:45.15:648,45,0	1/1:2,13:15:36.09:493,36,0	1/1:2,23:25:69.20:971,69,0	1/1:0,12:12:33.11:475,33,0	0/0:6,0:6:18.05:0,18,212	0/0:18,0:18:51.14:0,51,619	0/0:9,0:9:27.07:0,27,321	0/0:11,0:11:33.10:0,33,409	1/1:1,14:15:7.95:567,8,0	1/1:2,20:22:57.15:795,57,0	1/1:1,8:9:15.05:216,15,0
chr10	101360091	.	T	TTTAA	8806.30	PASS	AB=0.619;AC=16;AF=0.286;AN=56;BaseQRankSum=-7.356;DP=462;FS=8.705;HRun=0;HaplotypeScore=89.6672;InbreedingCoeff=0.7973;MQ=87.45;MQ0=0;MQRankSum=-9.702;QD=54.36;ReadPosRankSum=-2.277;VQSLOD=5.4006;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:21.54:0,22,383	0/0:2,0:2:3.01:0,3,55	0/0:25,0:25:63.12:0,63,1014	0/0:15,0:15:29.03:0,29,524	0/0:25,0:25:72.25:0,72,1309	0/0:14,0:14:39.12:0,39,666	0/0:14,0:14:33.10:0,33,571	1/1:9,24:34:75.26:1915,75,0	0/0:10,0:10:30.09:0,30,518	0/0:19,0:19:54.18:0,54,955	0/0:20,0:20:54.15:0,54,922	0/0:18,0:18:51.16:0,51,898	0/0:21,0:21:57.20:0,57,1030	0/0:17,0:17:51.16:0,51,884	1/1:1,13:15:42.14:1075,42,0	0/0:10,0:10:27.09:0,27,490	0/0:22,0:22:63.22:0,63,1146	0/1:8,8:16:17.73:748,0,18	1/1:7,10:17:39.01:854,39,0	1/1:5,12:16:33.11:802,33,0	1/1:2,6:8:15.05:392,15,0	0/0:11,0:11:30.10:0,30,538	0/0:16,0:16:48.16:0,48,873	0/0:6,0:6:18.06:0,18,327	0/0:26,0:26:75.26:0,75,1358	0/1:4,12:16:15.44:903,0,15	1/1:5,19:25:51.18:1333,51,0	1/1:4,10:14:30.10:784,30,0
chr10	101360726	.	C	CTT	1199.10	PASS	AB=0.886;AC=6;AF=0.107;AN=56;BaseQRankSum=5.652;DP=618;FS=7.770;HRun=1;HaplotypeScore=98.1982;InbreedingCoeff=0.3278;MQ=52.33;MQ0=38;MQRankSum=1.297;QD=8.33;ReadPosRankSum=3.348;VQSLOD=0.4505;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:43,0:37:29.56:332,30,0	0/0:9,0:9:14.75:0,15,101	0/0:15,0:7:10.95:0,11,72	0/0:22,0:12:18.49:0,18,162	0/0:17,0:17:20.95:0,21,168	0/0:29,0:28:53.94:0,54,465	0/0:25,0:21:47.42:0,47,425	0/0:23,0:21:50.72:0,51,404	0/1:31,0:30:1.86:316,0,2	0/0:25,0:23:65.64:0,66,531	0/0:17,0:15:17.97:0,18,148	0/1:24,0:24:21.62:454,0,22	0/1:22,0:18:24.63:190,0,25	0/0:19,0:19:44.94:0,45,385	0/0:18,0:17:26.05:0,26,252	0/1:4,19:23:36.81:37,0,37	0/0:25,0:22:44.68:0,45,364	0/0:7,0:7:11.84:0,12,83	0/0:18,0:16:46.62:0,47,368	0/0:28,0:25:14.43:0,14,124	0/0:15,0:12:5.99:0,6,50	0/0:25,0:24:47.95:0,48,401	0/0:25,0:24:50.91:0,51,416	0/0:29,0:25:41.49:0,41,385	0/0:28,0:28:45.42:0,45,376	0/0:20,0:20:44.52:0,45,347	0/0:21,0:21:44.66:0,45,346	0/0:14,0:11:30.72:0,31,236
chr10	101360759	.	T	TCACACA	1305.36	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=5.265;DP=457;FS=35.496;HRun=0;HaplotypeScore=105.9284;InbreedingCoeff=0.4428;MQ=47.68;MQ0=45;MQRankSum=-4.784;QD=14.34;ReadPosRankSum=-1.299;VQSLOD=0.9886;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:30:29.42:0,29,298	1/1:5,0:5:6.01:56,6,0	0/0:19,0:6:6.02:0,6,104	0/0:21,0:6:1.64:0,2,147	0/0:12,0:12:30.06:0,30,523	0/0:25,0:24:51.13:0,51,1095	0/0:18,0:16:11.53:0,12,560	0/1:16,0:14:99:381,0,101	0/0:23,0:21:25.85:0,26,459	0/0:20,0:18:48.02:0,48,833	0/0:16,0:15:21.07:0,21,452	0/0:20,0:20:38.41:0,38,386	0/0:19,0:15:11.21:0,11,223	0/0:11,0:11:20.98:0,21,205	0/0:10,0:9:1.55:0,2,4	0/0:24,0:23:36.14:0,36,329	0/0:18,0:15:26.07:0,26,588	1/1:0,3:4:3.01:100,3,0	0/1:8,0:6:1.47:153,0,1	1/1:15,0:12:8.86:146,9,0	1/1:13,0:11:4.07:12,4,0	0/0:23,0:22:30.10:0,30,676	0/0:12,0:11:21.07:0,21,462	0/0:22,0:18:29.19:0,29,479	0/0:18,0:18:33.11:0,33,731	0/1:16,0:16:99:343,0,135	0/1:11,0:11:14.72:183,0,15	1/1:3,0:3:1.46:84,1,0
chr10	101360761	.	T	TCACACA	1902.57	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=5.299;DP=462;FS=12.649;HRun=0;HaplotypeScore=106.7357;InbreedingCoeff=0.3818;MQ=47.66;MQ0=42;MQRankSum=-1.840;QD=11.26;ReadPosRankSum=-0.941;VQSLOD=0.9861;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:31:19.80:90,0,20	1/1:5,0:5:6.02:139,6,0	0/0:21,0:6:11.91:0,12,140	0/0:22,0:6:14.97:0,15,218	0/0:12,0:12:30.09:0,30,560	0/0:25,0:24:47.85:0,48,1036	0/0:18,0:16:14.53:0,15,555	0/1:16,0:15:32.86:448,0,33	0/1:23,0:21:65.58:80,0,66	0/0:22,0:20:37.27:0,37,833	0/0:15,0:15:21.07:0,21,466	0/0:19,0:19:24.85:0,25,197	0/1:20,0:16:26.43:26,0,93	0/0:11,0:11:18.91:0,19,120	0/0:2,7:10:1.55:0,2,4	0/0:24,0:23:14.02:0,14,138	0/0:18,0:15:10.89:0,11,489	1/1:3,0:3:3.01:97,3,0	0/1:7,0:5:1.28:253,0,1	1/1:14,0:12:8.86:174,9,0	1/1:13,0:11:4.07:12,4,0	0/0:21,0:21:33.10:0,33,682	0/0:13,0:12:21.07:0,21,476	0/0:23,0:19:31.32:0,31,450	0/0:18,0:18:36.11:0,36,741	0/1:17,0:17:49.51:387,0,50	1/1:12,0:12:5.17:257,5,0	1/1:3,0:3:5.50:109,5,0
chr10	101360763	.	T	TCACACACACA	3521.52	PASS	AB=1.000;AC=19;AF=0.352;AN=54;BaseQRankSum=0.598;DP=477;FS=8.775;HRun=0;HaplotypeScore=132.2218;InbreedingCoeff=0.5956;MQ=47.30;MQ0=43;MQRankSum=-4.656;QD=21.47;ReadPosRankSum=-0.976;VQSLOD=1.7462;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:33:40.87:64,0,41	1/1:5,0:5:6.02:140,6,0	0/0:25,0:6:14.51:0,15,193	0/0:24,0:6:14.54:0,15,264	0/0:12,0:12:33.10:0,33,763	0/0:25,0:24:50.88:0,51,1289	0/0:19,0:17:30.38:0,30,743	1/1:19,0:17:33.11:994,33,0	0/1:23,0:21:25.91:26,0,100	0/0:22,0:20:39.13:0,39,993	0/0:15,0:15:21.07:0,21,583	0/0:19,0:19:0.95:0,1,150	0/1:21,0:17:34.63:56,0,35	0/0:11,0:11:20.31:0,20,148	0/0:11,0:10:0:0,0,0	0/0:24,0:23:9.15:0,9,176	0/0:17,0:14:21.03:0,21,562	1/1:3,0:3:3.01:139,3,0	1/1:7,0:5:12.04:348,12,0	1/1:13,0:12:8.42:279,8,0	./.	0/0:21,0:21:33.11:0,33,917	0/0:13,0:12:24.07:0,24,652	0/0:23,0:19:24.03:0,24,596	0/0:17,0:17:36.12:0,36,984	1/1:19,0:19:31.47:830,31,0	1/1:13,0:13:21.03:520,21,0	1/1:3,0:3:3.01:127,3,0
chr10	101360976	.	C	CTA	1011.19	PASS	AB=1.000;AC=21;AF=0.438;AN=48;BaseQRankSum=9.640;DP=488;FS=2.714;HRun=0;HaplotypeScore=109.2134;InbreedingCoeff=0.7123;MQ=45.87;MQ0=35;MQRankSum=-9.456;QD=8.15;ReadPosRankSum=-2.738;VQSLOD=3.0489;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:50,0:7:17.67:0,18,166	0/0:64,0:9:18.59:0,19,129	0/0:16,0:16:45.13:0,45,683	0/0:21,0:21:55.10:0,55,792	0/0:30,0:28:66.64:0,67,926	1/1:29,0:28:53.71:415,54,0	1/1:0,6:6:6.02:81,6,0	0/0:22,0:22:66.12:0,66,917	0/0:14,0:14:20.14:0,20,450	1/1:5,4:9:6.02:91,6,0	1/1:2,3:5:6.02:87,6,0	0/1:7,0:6:0:0,0,0	./.	1/1:5,6:11:15.05:199,15,0	0/0:23,0:22:54.16:0,54,814	0/1:6,0:3:1.32:1,0,18	1/1:5,0:3:2.62:25,3,0	1/1:15,1:14:8.78:57,9,0	./.	0/0:20,0:22:57.14:0,57,812	0/0:19,0:18:44.97:0,45,615	0/0:30,0:30:81.67:0,82,1203	0/0:20,0:20:51.09:0,51,664	0/1:18,0:18:19.33:136,0,19	1/1:6,0:5:5.83:34,6,0	1/1:6,0:6:10.83:60,11,0
chr10	101360992	.	ACACT	A	578.71	PASS	AB=0.943;AC=19;AF=0.380;AN=50;BaseQRankSum=8.653;DP=536;FS=1.206;HRun=0;HaplotypeScore=125.8401;InbreedingCoeff=0.4621;MQ=43.96;MQ0=39;MQRankSum=-8.575;QD=2.30;ReadPosRankSum=-2.706;VQSLOD=1.9935;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:47,0:6:1.71:2,0,32	0/1:72,0:8:0.39:0,0,16	0/0:19,0:18:50.93:0,51,878	0/0:21,0:21:36.71:0,37,894	0/0:32,0:30:69.01:0,69,955	0/1:24,0:21:20.88:147,0,21	1/1:11,0:11:5.76:34,6,0	0/0:24,0:24:56.56:0,57,908	0/0:16,0:16:35.97:0,36,455	0/0:14,0:14:14:0,14,52	0/0:6,0:6:13.05:0,13,58	0/1:6,0:6:0:0,0,0	0/1:10,5:12:0:0,0,0	1/1:14,0:13:9.47:62,9,0	0/0:28,0:27:38.50:0,38,885	1/1:4,1:2:5.99:63,6,0	0/1:10,0:8:18.24:30,0,18	1/1:12,5:15:8.56:49,9,0	./.	0/0:26,0:25:42.85:0,43,900	0/0:21,0:20:27.69:0,28,631	0/0:33,0:32:78.13:0,78,1563	0/0:21,0:21:42.38:0,42,767	0/1:19,4:23:89.98:295,0,90	1/1:5,0:4:5.40:31,5,0	1/1:3,0:3:2.96:19,3,0
chr10	101360996	.	TCA	T	126.82	PASS	AB=0.966;AC=20;AF=0.435;AN=46;BaseQRankSum=7.078;DP=541;FS=2.613;HRun=0;HaplotypeScore=121.5748;InbreedingCoeff=0.3454;MQ=43.73;MQ0=36;MQRankSum=-4.465;QD=0.57;ReadPosRankSum=-1.432;VQSLOD=2.4312;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:17:1.55:4,2,0	./.	0/0:49,0:8:2.98:0,3,22	0/0:70,0:7:5.69:0,6,31	0/0:21,0:20:39.13:0,39,573	0/1:20,2:22:34.62:35,0,380	0/0:30,3:31:10.46:0,10,486	0/1:23,0:20:0:0,0,0	1/1:11,0:11:10.61:45,11,0	0/0:21,1:22:2.76:0,3,418	0/0:14,0:14:21.07:0,21,298	1/1:15,0:15:12.33:49,12,0	0/1:6,0:6:1.36:1,0,5	./.	1/1:16,0:13:1.55:4,2,0	1/1:14,0:13:12.39:46,12,0	0/1:30,1:30:26.34:26,0,492	1/1:5,0:2:2.84:14,3,0	0/0:10,0:8:1.82:0,2,5	1/1:18,0:16:2.21:6,2,0	./.	0/0:25,0:24:33.11:0,33,485	0/1:19,2:20:1.37:1,0,412	0/0:35,0:34:65.92:0,66,919	0/0:21,0:21:22.76:0,23,399	0/1:22,0:22:34:34,0,74	./.	./.
chr10	101361019	.	CACA	C	1164.34	PASS	AB=1.000;AC=24;AF=0.462;AN=52;BaseQRankSum=10.664;DP=499;FS=7.978;HRun=0;HaplotypeScore=138.1215;InbreedingCoeff=0.6866;MQ=53.23;MQ0=16;MQRankSum=-10.352;QD=7.92;ReadPosRankSum=0.122;VQSLOD=2.7041;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,6:18:1.55:4,2,0	1/1:3,0:3:6.01:56,6,0	0/0:37,0:10:30.09:0,30,435	0/0:45,0:12:33.02:0,33,407	0/0:22,0:22:54.16:0,54,1142	0/0:22,0:22:53.76:0,54,991	0/0:29,0:29:71.98:0,72,1311	1/1:8,0:7:19.24:137,19,0	1/1:4,9:13:15.04:198,15,0	0/0:31,0:31:93.14:0,93,1555	0/0:11,0:11:27.08:0,27,576	0/1:18,0:18:11.30:20,0,11	0/0:6,0:6:3.35:0,3,19	1/1:13,0:13:3:28,3,0	1/1:17,0:17:6.06:36,6,0	1/1:6,8:13:15.04:205,15,0	0/0:35,0:35:87.39:0,87,1468	1/1:2,0:1:3.01:51,3,0	1/1:9,0:8:17.60:143,18,0	1/1:13,0:13:7.56:60,8,0	./.	0/0:24,0:23:51.17:0,51,1055	0/0:25,0:25:62.98:0,63,1135	0/0:41,0:40:99:0,114,2232	0/0:23,0:23:54.01:0,54,1052	0/1:15,0:15:99:331,0,106	1/1:4,0:4:9.01:83,9,0	./.
chr10	101361021	.	CA	C	1210.98	PASS	AB=1.000;AC=27;AF=0.519;AN=52;BaseQRankSum=11.800;DP=483;FS=9.653;HRun=1;HaplotypeScore=123.9512;InbreedingCoeff=0.7788;MQ=56.15;MQ0=14;MQRankSum=-11.272;QD=8.13;ReadPosRankSum=1.156;VQSLOD=0.3205;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:1.55:4,2,0	1/1:3,0:3:6.01:56,6,0	0/0:37,0:11:33.10:0,33,425	0/0:41,0:13:36.89:0,37,417	0/0:22,0:22:54.01:0,54,790	0/0:21,0:21:51.26:0,51,695	0/0:26,0:26:61.76:0,62,900	1/1:8,0:7:20.02:156,20,0	1/1:13,0:13:14.92:139,15,0	0/0:32,0:32:92.06:0,92,1244	0/0:10,0:10:24.08:0,24,373	1/1:7,9:16:21.01:227,21,0	1/1:4,2:6:8.91:80,9,0	1/1:13,0:13:3:28,3,0	1/1:17,0:17:6.11:36,6,0	1/1:14,0:13:14.56:119,15,0	0/0:32,0:32:79.58:0,80,1064	1/1:2,0:1:3:26,3,0	1/1:9,0:8:20.48:165,20,0	1/1:12,0:12:7.56:60,8,0	./.	0/0:22,0:22:51.16:0,51,742	0/0:24,0:24:61.75:0,62,861	0/0:43,0:42:99:0,117,1665	0/0:23,0:23:54:0,54,762	0/1:15,0:15:53.64:230,0,54	1/1:4,0:4:9.01:83,9,0	./.
chr10	101361023	.	C	CT	2014.27	PASS	AB=0.556;AC=27;AF=0.519;AN=52;BaseQRankSum=10.995;DP=477;FS=11.524;HRun=0;HaplotypeScore=125.9289;InbreedingCoeff=0.7652;MQ=59.66;MQ0=14;MQRankSum=-10.887;QD=13.61;ReadPosRankSum=1.888;VQSLOD=4.7505;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:0.43:1,0,0	1/1:0,3:3:6.02:92,6,0	0/0:39,0:13:38.96:0,39,503	0/0:41,0:14:33.54:0,34,422	0/0:23,0:23:54.17:0,54,735	0/0:21,0:21:50.57:0,51,625	0/0:27,0:27:63.02:0,63,796	1/1:1,7:7:21.07:320,21,0	1/1:9,4:13:15.04:187,15,0	0/0:32,0:32:91.44:0,91,1223	0/0:10,0:10:24.05:0,24,315	1/1:9,7:16:20.97:230,21,0	1/1:4,2:6:9.03:123,9,0	1/1:0,13:13:3.01:46,3,0	1/1:2,15:17:2.93:46,3,0	1/1:9,5:13:15.04:190,15,0	0/0:30,0:30:79.54:0,80,1034	1/1:1,1:1:3.01:34,3,0	1/1:9,0:8:21.07:315,21,0	1/1:1,11:12:6.02:92,6,0	./.	0/0:21,0:21:48.16:0,48,663	0/0:24,0:24:59.95:0,60,806	0/0:38,0:38:99:0,108,1479	0/0:21,0:21:51.12:0,51,687	0/1:3,12:15:43.03:397,0,43	1/1:0,4:4:9.03:138,9,0	./.
chr10	101361025	.	C	CTAA	4717.72	PASS	AB=1.000;AC=29;AF=0.537;AN=54;BaseQRankSum=15.518;DP=483;FS=9.191;HRun=0;HaplotypeScore=133.8182;InbreedingCoeff=0.8467;MQ=64.36;MQ0=13;MQRankSum=-15.026;QD=29.30;ReadPosRankSum=-6.843;VQSLOD=2.6712;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:7,9:16:5.85:37,6,0	1/1:3,0:3:8.96:146,9,0	0/0:39,0:13:17.13:0,17,563	0/0:46,0:19:21.20:0,21,561	0/0:22,0:22:57.18:0,57,964	0/0:20,0:20:51.15:0,51,834	0/0:22,0:22:60.14:0,60,975	1/1:10,0:9:24.08:520,24,0	1/1:17,0:17:41.66:472,42,0	0/0:31,0:31:93.26:0,93,1555	0/0:11,0:11:27.08:0,27,435	1/1:16,0:16:35.79:411,36,0	1/1:6,0:6:17.89:177,18,0	1/1:14,0:14:38.44:289,38,0	1/1:17,2:19:56.23:447,56,0	1/1:13,0:13:38.61:410,39,0	0/0:29,0:29:81.21:0,81,1341	1/1:2,0:1:3.01:39,3,0	1/1:3,8:10:27.09:558,27,0	1/1:11,1:12:35.42:305,35,0	1/1:2,0:2:2.97:20,3,0	0/0:21,0:21:39.13:0,39,686	0/0:23,0:23:60.20:0,60,1034	0/0:37,0:36:99:0,108,1898	0/0:21,0:21:47.97:0,48,844	0/1:15,0:15:51.19:634,0,51	1/1:5,0:5:15.01:253,15,0	./.
chr10	101361165	.	AG	A	6875.73	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=16.137;DP=439;FS=5.036;HRun=1;HaplotypeScore=81.0467;InbreedingCoeff=0.9863;MQ=92.41;MQ0=0;MQRankSum=-14.315;QD=34.90;ReadPosRankSum=1.233;VQSLOD=4.8319;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:57.10:769,57,0	1/1:0,4:4:9.03:125,9,0	0/0:20,0:20:60.19:0,60,925	0/0:23,0:23:69.03:0,69,1019	0/0:21,0:21:63.21:0,63,1007	0/0:19,0:19:57.18:0,57,882	0/0:20,0:20:60.19:0,60,935	1/1:0,27:27:81.23:1105,81,0	1/1:0,11:11:30.03:394,30,0	0/0:18,0:18:54.13:0,54,790	0/0:14,0:14:39.12:0,39,595	1/1:0,10:10:21.07:292,21,0	1/1:0,10:10:24.08:335,24,0	1/1:0,15:15:33.11:459,33,0	1/1:0,13:13:36.05:478,36,0	1/1:0,5:5:15.05:209,15,0	0/0:40,0:40:99:0,117,1837	1/1:0,9:9:18.06:251,18,0	1/1:0,14:14:39.13:545,39,0	1/1:0,9:9:24.04:306,24,0	1/1:0,20:20:45.11:606,45,0	0/0:13,0:13:36.11:0,36,551	0/0:14,0:14:42.10:0,42,643	0/0:19,0:19:57.19:0,57,911	0/0:21,0:21:63.21:0,63,1004	1/1:0,9:9:27.09:373,27,0	1/1:0,9:9:24.08:334,24,0	1/1:0,8:8:21.07:293,21,0
chr10	101361315	.	AG	A	4052.45	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=13.170;DP=350;FS=12.968;HRun=5;HaplotypeScore=76.3583;InbreedingCoeff=0.9326;MQ=73.06;MQ0=0;MQRankSum=-9.404;QD=25.02;ReadPosRankSum=2.715;VQSLOD=2.2775;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:51.14:571,51,0	1/1:0,2:2:6.02:68,6,0	0/0:8,0:7:11.25:0,11,129	0/0:17,0:17:17.27:0,17,322	0/0:11,0:11:27.09:0,27,367	0/0:13,0:13:30.10:0,30,409	0/0:27,0:28:80.73:0,81,1042	1/1:2,12:14:30.08:339,30,0	1/1:1,12:13:33.09:372,33,0	0/0:14,0:14:30.10:0,30,411	0/0:8,0:8:18.06:0,18,245	1/1:1,8:9:21.06:236,21,0	1/1:1,8:9:18.05:204,18,0	1/1:0,9:9:27.08:306,27,0	1/1:1,11:12:27.08:306,27,0	1/1:0,12:12:21.02:224,21,0	0/0:31,0:31:81.26:0,81,1092	1/1:0,9:9:21.06:238,21,0	1/1:1,11:12:30.09:340,30,0	1/1:1,8:9:3.01:34,3,0	1/1:2,12:14:30.08:340,30,0	0/0:13,0:13:30.10:0,30,408	0/0:13,0:13:27.09:0,27,367	0/0:22,0:22:66.21:0,66,887	0/0:10,0:10:27.07:0,27,339	1/1:1,7:8:21.06:237,21,0	1/1:2,6:7:15.04:170,15,0	1/1:0,2:2:6.02:68,6,0
chr10	101361419	.	GGAAGGTTGAT	G	3890.21	PASS	AB=0.662;AC=21;AF=0.404;AN=52;BaseQRankSum=11.038;DP=312;FS=57.034;HRun=0;HaplotypeScore=136.9016;InbreedingCoeff=0.3518;MQ=86.49;MQ0=0;MQRankSum=-10.638;QD=53.29;ReadPosRankSum=4.613;VQSLOD=1.3719;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:15.05:402,15,0	1/1:0,1:1:3.01:80,3,0	0/0:22,0:21:63.17:0,63,3052	0/0:23,0:22:60.20:0,60,2843	0/0:15,0:15:42.14:0,42,2260	0/0:24,0:24:72.25:0,72,3881	0/0:33,0:33:99:0,99,4828	0/1:3,3:6:29.75:228,0,30	0/1:2,6:8:15.73:456,0,16	0/0:16,0:16:48.16:0,48,2532	0/0:19,0:19:57.20:0,57,2956	0/1:2,2:4:13.88:74,0,14	1/1:0,5:5:15.05:399,15,0	0/1:2,5:7:19.71:376,0,20	1/1:1,5:6:15.05:399,15,0	0/1:2,6:8:15.73:456,0,16	0/0:21,0:21:63.22:0,63,2980	0/1:3,2:5:99:149,0,166	0/1:5,1:6:17.21:73,0,17	./.	1/1:0,1:1:3.01:82,3,0	0/0:14,0:14:42.13:0,42,2084	0/0:17,0:17:51.17:0,51,2483	0/0:16,0:16:45.61:0,46,2279	0/0:16,0:16:45.15:0,45,2391	1/1:2,6:8:5.16:475,5,0	1/1:0,3:3:9.03:241,9,0	./.
chr10	101361459	.	ACGAGAGGG	A	2696.57	PASS	AC=24;AF=0.500;AN=48;BaseQRankSum=10.824;DP=262;FS=52.892;HRun=0;HaplotypeScore=130.4906;InbreedingCoeff=0.8615;MQ=79.47;MQ0=0;MQRankSum=-9.116;QD=53.93;ReadPosRankSum=4.537;VQSLOD=1.5737;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:6.02:113,6,0	./.	0/0:18,0:16:31.08:0,31,961	0/0:23,0:21:29.73:0,30,928	0/0:18,0:18:54.15:0,54,1909	0/0:22,0:22:66.23:0,66,2477	0/0:27,0:27:81.28:0,81,3509	1/1:1,0:1:3.01:57,3,0	1/1:8,0:8:21.03:408,21,0	0/0:11,0:11:33.11:0,33,1214	0/0:14,0:14:42.14:0,42,1801	1/1:2,0:2:6.02:111,6,0	1/1:3,0:3:9.03:200,9,0	1/1:6,0:6:18.06:344,18,0	1/1:0,6:6:17.39:371,17,0	1/1:10,0:10:30.10:602,30,0	0/0:18,0:18:54.19:0,54,2249	1/1:1,1:2:6.02:130,6,0	./.	./.	1/1:1,0:1:3.01:46,3,0	0/0:12,0:12:36.08:0,36,1354	0/0:17,0:17:48.14:0,48,1848	0/0:14,0:14:42.13:0,42,1642	0/0:13,0:13:39.12:0,39,1647	1/1:1,4:5:15.05:400,15,0	1/1:1,1:2:5.99:106,6,0	./.
chr10	101361463	.	GAGGGGGC	G	1557.30	PASS	AB=1.000;AC=23;AF=0.479;AN=48;BaseQRankSum=10.357;DP=262;FS=75.079;HRun=0;HaplotypeScore=134.7815;InbreedingCoeff=0.8161;MQ=78.27;MQ0=0;MQRankSum=-8.971;QD=31.15;ReadPosRankSum=4.697;VQSLOD=0.3721;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,2:4:5.97:76,6,0	./.	0/0:19,0:18:37.85:0,38,690	0/0:23,0:20:35.13:0,35,706	0/0:19,0:19:57.16:0,57,1720	0/0:21,0:21:63.20:0,63,1888	0/0:28,0:28:84.29:0,84,3005	1/1:1,0:1:2.74:12,3,0	1/1:3,5:8:20.91:290,21,0	0/0:14,0:14:42.12:0,42,1200	0/0:15,0:15:42.14:0,42,1591	1/1:1,1:2:5.89:73,6,0	1/1:0,3:3:9.02:140,9,0	1/1:2,4:6:17.88:229,18,0	1/1:6,0:6:15.02:216,15,0	1/1:4,6:10:29.67:408,30,0	0/0:19,0:19:57.16:0,57,1973	1/1:2,0:2:3.01:45,3,0	./.	./.	1/1:1,0:1:0.47:1,0,0	0/0:10,0:10:30.09:0,30,1100	0/0:16,0:16:45.14:0,45,1537	0/0:13,0:13:39.13:0,39,1395	0/0:12,0:12:36.12:0,36,1422	1/1:5,0:5:14.84:207,15,0	0/1:2,0:2:1.31:43,0,1	./.
chr10	101361466	.	G	GA	461.34	PASS	AB=0.750;AC=20;AF=0.417;AN=48;BaseQRankSum=6.046;DP=257;FS=14.324;HRun=0;HaplotypeScore=105.4750;InbreedingCoeff=0.6040;MQ=80.09;MQ0=0;MQRankSum=-4.920;QD=10.49;ReadPosRankSum=-0.231;VQSLOD=3.2809;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:2.23:33,2,0	./.	0/0:18,0:17:29.16:0,29,321	0/0:22,0:19:26.33:0,26,284	0/0:17,0:17:51.17:0,51,703	0/0:21,0:21:63.12:0,63,791	0/0:29,0:29:84.27:0,84,1158	1/1:0,1:1:3.01:45,3,0	1/1:8,0:8:4.61:73,5,0	0/0:14,0:14:42.10:0,42,527	0/0:14,0:14:42.13:0,42,570	1/1:2,0:2:2.18:30,2,0	1/1:3,0:3:1.30:39,1,0	1/1:6,0:6:5.91:100,6,0	0/0:6,0:6:5.54:0,6,14	1/1:10,0:10:9.20:130,9,0	0/0:20,0:20:54.14:0,54,715	0/1:1,1:2:0.62:42,0,1	./.	./.	1/1:0,1:1:3.01:46,3,0	0/0:9,0:9:27.09:0,27,377	0/0:15,0:15:42.04:0,42,546	0/0:13,0:13:39.13:0,39,545	0/0:13,0:13:39.11:0,39,526	0/1:4,1:5:6.27:38,0,6	1/1:1,1:2:0.28:42,0,0	./.
chr10	101361473	.	G	GA	329.81	PASS	AB=1.000;AC=19;AF=0.380;AN=50;BaseQRankSum=8.345;DP=256;FS=9.553;HRun=0;HaplotypeScore=114.3537;InbreedingCoeff=0.5631;MQ=80.35;MQ0=0;MQRankSum=-5.332;QD=6.00;ReadPosRankSum=-2.670;VQSLOD=2.4376;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,2:4:2.95:38,3,0	./.	0/0:19,0:17:9.15:0,9,234	0/0:23,0:20:26.13:0,26,356	0/0:14,0:14:42.12:0,42,553	0/0:18,0:18:48:0,48,607	0/0:26,0:26:78.23:0,78,1052	1/1:2,0:2:3:27,3,0	1/1:6,3:9:5.91:53,6,0	0/0:12,0:12:36.12:0,36,503	0/0:15,0:15:42.13:0,42,569	1/1:1,1:2:2.60:32,3,0	1/1:4,0:4:5.71:38,6,0	1/1:5,2:7:11.85:97,12,0	0/1:6,0:6:17.39:17,0,30	1/1:8,4:12:20.39:170,20,0	0/0:20,0:20:57.13:0,57,756	0/1:2,0:2:4.18:4,0,13	./.	0/0:2,0:2:0:0,0,0	1/1:2,0:2:2.37:8,2,0	0/0:10,0:10:30.10:0,30,418	0/0:14,0:14:36.12:0,36,503	0/0:10,0:10:30.10:0,30,419	0/0:14,0:14:42.06:0,42,541	0/1:5,0:5:5.94:6,0,30	0/0:2,0:2:4.72:0,5,21	./.
chr10	101361475	.	AGGGGT	A	1313.93	PASS	AC=24;AF=0.480;AN=50;BaseQRankSum=10.577;DP=259;FS=57.140;HRun=0;HaplotypeScore=130.2866;InbreedingCoeff=0.7980;MQ=79.99;MQ0=0;MQRankSum=-8.639;QD=23.05;ReadPosRankSum=1.443;VQSLOD=0.9037;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,2:4:1.91:43,2,0	./.	0/0:19,0:18:27.99:0,28,573	0/0:27,0:23:35.70:0,36,796	0/0:14,0:14:42.14:0,42,1126	0/0:17,0:17:42.14:0,42,1083	0/0:25,0:25:69.22:0,69,2019	1/1:2,0:2:2.98:21,3,0	1/1:4,5:9:19.66:214,20,0	0/0:13,0:13:39.13:0,39,1119	0/0:15,0:15:41.91:0,42,1043	1/1:1,1:2:5.05:52,5,0	1/1:1,3:4:8.70:102,9,0	1/1:3,4:7:18.74:179,19,0	1/1:0,6:6:17.51:231,18,0	1/1:6,6:12:32.53:332,33,0	0/0:20,0:20:54.19:0,54,1558	1/1:1,1:2:3.01:53,3,0	./.	0/0:1,1:2:0:0,0,0	1/1:2,0:2:2.90:16,3,0	0/0:10,0:10:30.10:0,30,861	0/0:13,0:13:35.71:0,36,1008	0/0:10,0:10:30.10:0,30,934	0/0:15,0:15:42.13:0,42,1084	1/1:1,4:5:13.86:205,14,0	1/1:1,1:2:2.96:50,3,0	./.
chr10	101361483	.	GA	G	543.32	PASS	AB=1.000;AC=23;AF=0.479;AN=48;BaseQRankSum=9.997;DP=250;FS=34.994;HRun=1;HaplotypeScore=97.9065;InbreedingCoeff=0.8077;MQ=88.93;MQ0=0;MQRankSum=-7.332;QD=12.64;ReadPosRankSum=3.474;VQSLOD=0.7333;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:2.99:24,3,0	./.	0/0:25,0:22:31.55:0,32,596	0/0:30,1:26:31.90:0,32,606	0/0:14,0:14:37.74:0,38,591	0/0:17,0:17:35.22:0,35,534	0/0:23,0:23:69.23:0,69,1040	./.	1/1:5,2:7:20.94:174,21,0	0/0:13,0:13:36.12:0,36,548	0/0:13,0:13:36.11:0,36,514	1/1:1,0:1:2.99:24,3,0	1/1:3,1:4:8.97:71,9,0	1/1:4,1:5:14.76:106,15,0	1/1:6,0:6:11.34:38,11,0	1/1:6,2:8:23.91:198,24,0	0/0:19,0:19:57.16:0,57,865	1/1:2,0:2:4.04:12,4,0	./.	0/1:2,0:2:0:0,0,0	1/1:1,0:1:3:26,3,0	0/0:10,0:10:27.09:0,27,398	0/0:13,0:13:39.13:0,39,592	0/0:12,0:12:33.11:0,33,526	0/0:13,0:13:39.13:0,39,604	1/1:4,0:4:10.33:40,10,0	1/1:1,0:1:2.22:7,2,0	./.
chr10	101361487	.	GAGAGAGAA	G	2676.01	PASS	AC=26;AF=0.500;AN=52;BaseQRankSum=10.292;DP=258;FS=44.994;HRun=0;HaplotypeScore=125.2317;InbreedingCoeff=0.8217;MQ=91.88;MQ0=0;MQRankSum=-8.918;QD=48.65;ReadPosRankSum=1.683;VQSLOD=1.7016;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,2:3:3.01:83,3,0	./.	0/0:28,0:26:61.61:0,62,1754	0/0:33,0:26:42.28:0,42,1781	0/0:15,0:15:45.15:0,45,1905	0/0:13,0:13:36.08:0,36,1585	0/0:22,0:22:66.21:0,66,2611	1/1:3,0:3:2.94:18,3,0	1/1:2,5:7:21.04:430,21,0	0/0:14,0:14:42.14:0,42,1712	0/0:11,0:11:30.10:0,30,1225	1/1:0,1:1:3.01:83,3,0	1/1:3,3:6:17.98:282,18,0	1/1:1,4:5:15.04:311,15,0	1/1:2,6:8:24.03:455,24,0	1/1:2,6:8:24.04:546,24,0	0/0:19,0:19:57.20:0,57,2444	1/1:1,1:2:6.02:128,6,0	1/1:3,0:2:5.85:36,6,0	1/1:1,1:2:3.01:38,3,0	0/0:1,0:1:2.80:0,3,13	0/0:9,0:9:27.08:0,27,998	0/0:12,0:12:36.10:0,36,1547	0/0:12,0:12:33.11:0,33,1510	0/0:13,0:13:39.13:0,39,1766	1/1:0,4:4:12.04:319,12,0	1/1:2,1:3:9.01:145,9,0	./.
chr10	101361592	.	G	GC	38.41	PASS	AB=0.893;AC=3;AF=0.060;AN=50;BaseQRankSum=5.633;DP=294;FS=6.540;HRun=0;HaplotypeScore=55.2043;InbreedingCoeff=-0.0353;MQ=48.98;MQ0=24;MQRankSum=-4.383;QD=1.20;ReadPosRankSum=-0.518;VQSLOD=0.0419;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,1:10:0.87:0,1,3	0/0:1,0:1:3.01:0,3,42	0/0:13,0:6:12.98:0,13,167	0/0:31,0:8:7.09:0,7,111	0/0:15,0:15:33.11:0,33,454	0/0:22,0:21:45.15:0,45,619	0/0:8,0:7:14.98:0,15,211	0/1:10,9:17:49.72:50,0,184	0/1:5,0:5:32.37:75,0,32	0/0:18,0:15:42.14:0,42,574	0/0:16,0:16:32.80:0,33,453	./.	0/0:5,0:5:9.03:0,9,120	0/0:6,0:6:15.01:0,15,185	0/0:3,0:1:3.01:0,3,41	./.	0/0:27,0:25:59.22:0,59,791	0/0:5,0:4:0.69:0,1,38	./.	0/1:7,0:8:0.19:0,0,37	0/0:10,0:8:5.64:0,6,80	0/0:9,0:9:21.04:0,21,255	0/0:10,0:10:24.08:0,24,331	0/0:12,0:12:21.07:0,21,284	0/0:16,0:16:32.77:0,33,454	0/0:7,0:7:14.26:0,14,205	0/0:3,0:3:6.02:0,6,80	0/0:2,0:2:5.89:0,6,57
chr10	101361610	.	GA	G	646.58	PASS	AB=0.857;AC=19;AF=0.413;AN=46;BaseQRankSum=6.594;DP=299;FS=5.874;HRun=2;HaplotypeScore=68.4530;InbreedingCoeff=0.7025;MQ=76.51;MQ0=20;MQRankSum=-6.321;QD=11.15;ReadPosRankSum=-2.535;VQSLOD=0.8305;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:5:12.02:129,12,0	./.	0/0:36,0:20:35.95:0,36,474	0/0:60,0:32:63.37:0,63,741	0/0:9,0:9:27.09:0,27,358	0/0:26,0:25:66.12:0,66,834	0/0:11,0:11:26.74:0,27,349	1/1:14,12:24:50.65:393,51,0	1/1:0,2:2:6.01:61,6,0	0/0:17,0:14:1.90:0,2,408	0/0:13,0:13:33.11:0,33,438	./.	1/1:2,1:3:2.99:24,3,0	./.	1/1:2,0:1:2.99:23,3,0	./.	0/0:18,0:17:38.94:0,39,503	1/1:4,1:4:2.99:24,3,0	./.	0/0:3,5:8:2.04:0,2,6	0/1:5,1:4:0:0,0,0	0/0:7,0:7:18.06:0,18,239	0/0:4,0:4:12:0,12,139	0/0:11,0:11:30.09:0,30,388	0/0:14,0:14:11.37:0,11,412	1/1:3,2:5:8.19:90,8,0	1/1:2,0:2:3:28,3,0	1/1:0,1:1:3.01:33,3,0
chr10	101361611	.	A	AG	735	PASS	AC=18;AF=0.409;AN=44;BaseQRankSum=6.626;DP=300;FS=3.465;HRun=1;HaplotypeScore=69.2658;InbreedingCoeff=0.7255;MQ=77.91;MQ0=20;MQRankSum=-6.275;QD=14.41;ReadPosRankSum=-3.045;VQSLOD=2.0636;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:6:11.93:142,12,0	./.	0/0:37,0:21:37.78:0,38,489	0/0:60,0:32:67.58:0,68,740	0/0:10,0:10:27.09:0,27,360	0/0:27,0:26:66.12:0,66,838	0/0:11,0:11:27.02:0,27,362	1/1:26,0:24:53.24:402,53,0	1/1:2,0:2:6.01:61,6,0	0/0:17,0:14:1.90:0,2,415	0/0:13,0:13:33.11:0,33,440	./.	1/1:3,0:3:2.99:24,3,0	./.	1/1:2,0:1:2.99:23,3,0	./.	0/0:17,0:16:38.44:0,38,512	1/1:4,1:4:3.01:44,3,0	./.	0/0:6,0:7:0:0,0,0	./.	0/0:7,0:7:18.05:0,18,240	0/0:4,0:4:12:0,12,140	0/0:11,0:11:30.10:0,30,399	0/0:14,0:14:11.35:0,11,415	1/1:3,1:4:10.27:105,10,0	1/1:0,1:1:3.01:47,3,0	1/1:1,0:1:3.01:42,3,0
chr10	101361612	.	AG	A	464.70	PASS	AB=1.000;AC=17;AF=0.370;AN=46;BaseQRankSum=7.986;DP=298;FS=2.428;HRun=1;HaplotypeScore=70.8638;InbreedingCoeff=0.7465;MQ=78.25;MQ0=20;MQRankSum=-6.992;QD=8.61;ReadPosRankSum=-1.866;VQSLOD=0.4670;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,1:6:11.36:61,11,0	./.	0/0:36,1:21:44.99:0,45,681	0/0:60,0:32:69.57:0,70,956	0/0:10,0:10:30.09:0,30,455	0/0:27,0:26:69.19:0,69,1038	0/0:12,0:12:29.74:0,30,448	1/1:15,9:22:37.89:397,38,0	1/1:2,0:2:5.83:33,6,0	0/0:17,0:14:30.07:0,30,560	0/0:13,0:13:33.11:0,33,527	./.	1/1:3,0:3:2.80:13,3,0	./.	0/0:2,0:1:0:0,0,0	./.	0/0:17,0:16:39.12:0,39,616	1/1:4,1:4:3.01:32,3,0	./.	0/0:7,0:7:4.87:0,5,17	0/1:7,0:5:0:0,0,0	0/0:7,0:7:18.06:0,18,287	0/0:4,0:4:12.04:0,12,179	0/0:12,0:12:33.07:0,33,496	0/0:13,0:13:32.79:0,33,527	1/1:3,1:4:10.67:61,11,0	1/1:1,0:1:2.60:10,3,0	1/1:1,0:1:2.84:14,3,0
chr10	101361615	.	G	GA	356.28	PASS	AB=0.980;AC=14;AF=0.350;AN=40;BaseQRankSum=7.225;DP=299;FS=8.787;HRun=1;HaplotypeScore=73.5827;InbreedingCoeff=0.6941;MQ=80.02;MQ0=18;MQRankSum=-6.063;QD=7.13;ReadPosRankSum=-1.144;VQSLOD=-0.2726;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,4:6:11.70:107,12,0	./.	0/0:39,0:23:47.07:0,47,714	0/0:61,0:33:78.23:0,78,860	0/0:11,0:11:33.10:0,33,443	0/0:28,0:27:75.18:0,75,1003	0/0:12,0:12:30.03:0,30,417	0/1:23,1:22:40.19:200,0,40	1/1:2,0:2:5.87:35,6,0	0/0:15,0:13:36.12:0,36,504	0/0:14,0:14:36.11:0,36,487	./.	./.	./.	./.	./.	0/0:19,0:18:39.13:0,39,543	0/1:5,0:4:0:0,0,0	./.	1/1:6,0:6:5.83:37,6,0	./.	0/0:7,0:7:21.07:0,21,292	0/0:4,0:4:12.04:0,12,156	0/0:13,0:13:33.11:0,33,460	0/0:11,0:11:33.11:0,33,462	1/1:3,1:4:10.16:69,10,0	1/1:1,0:1:2.50:9,2,0	1/1:1,0:1:3.01:40,3,0
chr10	101361617	.	AG	A	612.40	PASS	AC=16;AF=0.400;AN=40;BaseQRankSum=7.673;DP=301;FS=3.966;HRun=2;HaplotypeScore=75.4459;InbreedingCoeff=0.8107;MQ=82.19;MQ0=18;MQRankSum=-6.661;QD=10.94;ReadPosRankSum=-0.539;VQSLOD=1.6041;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,1:6:15.01:175,15,0	./.	0/0:41,0:25:55.77:0,56,861	0/0:62,0:34:66.59:0,67,1046	0/0:11,0:11:33.11:0,33,528	0/0:29,0:28:78.23:0,78,1197	0/0:11,0:11:26.74:0,27,431	1/1:12,12:22:18.36:318,18,0	1/1:0,2:2:6.02:69,6,0	0/0:15,0:13:36.12:0,36,575	0/0:14,0:14:39.13:0,39,620	./.	./.	./.	./.	./.	0/0:19,0:18:42.14:0,42,658	1/1:4,1:4:2.50:9,2,0	./.	1/1:1,5:6:3.01:42,3,0	1/1:4,3:5:2.97:20,3,0	0/0:7,0:7:21.07:0,21,336	0/0:5,0:5:15.05:0,15,235	0/0:13,0:13:36.12:0,36,571	0/0:11,0:11:33.11:0,33,528	1/1:2,2:4:8.92:95,9,0	./.	1/1:0,1:1:3.01:39,3,0
chr10	101361618	.	G	GCA	682.93	PASS	AB=1.000;AC=15;AF=0.357;AN=42;BaseQRankSum=7.635;DP=311;FS=10.285;HRun=0;HaplotypeScore=85.3917;InbreedingCoeff=0.7530;MQ=82.52;MQ0=16;MQRankSum=-6.214;QD=11.77;ReadPosRankSum=-2.027;VQSLOD=2.2181;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,4:7:15:148,15,0	1/1:2,0:2:2.97:20,3,0	0/0:42,0:26:53.23:0,53,875	0/0:62,0:34:75.07:0,75,1070	0/0:11,0:11:33.11:0,33,538	0/0:29,0:28:78.21:0,78,1215	0/0:12,0:12:26.93:0,27,440	1/1:26,0:25:27.32:400,27,0	1/1:2,0:2:6.01:60,6,0	0/0:14,0:13:36.12:0,36,586	0/0:14,0:14:39.13:0,39,631	./.	./.	./.	./.	./.	0/0:20,0:19:42.14:0,42,673	0/0:5,0:4:2.04:0,2,6	./.	0/1:7,0:7:2.38:32,0,2	1/1:8,0:6:2.97:20,3,0	0/0:7,0:7:21.07:0,21,343	0/0:5,0:5:15.05:0,15,239	0/0:14,0:14:36.12:0,36,583	0/0:12,0:12:33.11:0,33,538	1/1:4,0:4:8.97:105,9,0	./.	1/1:1,0:1:3.01:52,3,0
chr10	101361628	.	C	CTT	1774.33	PASS	AC=18;AF=0.429;AN=42;BaseQRankSum=8.522;DP=296;FS=3.286;HRun=0;HaplotypeScore=68.1498;InbreedingCoeff=0.8565;MQ=94.91;MQ0=7;MQRankSum=-7.486;QD=40.33;ReadPosRankSum=-1.130;VQSLOD=4.6642;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,6:7:18.06:319,18,0	1/1:1,1:2:4.57:59,5,0	0/0:42,0:29:71.66:0,72,1156	0/0:58,1:37:76.50:0,76,1004	0/0:12,0:12:36.12:0,36,584	0/0:26,0:26:75.24:0,75,1198	0/0:14,0:14:42.14:0,42,685	1/1:1,15:17:39.13:732,39,0	1/1:0,2:2:6.02:112,6,0	0/0:11,0:11:33.11:0,33,531	0/0:15,0:15:45.15:0,45,729	./.	./.	./.	./.	./.	0/0:19,0:19:54.17:0,54,856	1/1:0,2:2:3.01:56,3,0	./.	1/1:0,6:6:15.05:276,15,0	1/1:1,4:5:12.04:220,12,0	0/0:11,0:11:33.09:0,33,491	0/0:7,0:7:21.07:0,21,342	0/0:15,0:15:42.14:0,42,685	0/0:14,0:14:42.14:0,42,685	1/1:0,2:2:6.02:113,6,0	./.	1/1:0,1:1:3.01:57,3,0
chr10	101361814	.	C	CTGATTTAAAAAATATG	16466.24	PASS	AB=0.857;AC=31;AF=0.554;AN=56;BaseQRankSum=13.746;DP=398;FS=2.007;HRun=0;HaplotypeScore=198.4964;InbreedingCoeff=0.7845;MQ=89.49;MQ0=0;MQRankSum=-13.967;QD=126.66;ReadPosRankSum=-0.694;VQSLOD=4.7983;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,1:2:3.01:237,3,0	1/1:3,1:5:15.05:837,15,0	0/0:24,0:24:60.21:0,60,2280	0/0:13,0:13:30.08:0,30,706	0/0:27,0:27:78.25:0,78,3219	0/0:35,0:35:99:0,105,4689	0/0:22,0:22:63.22:0,63,2843	1/1:26,0:26:69.19:3280,69,0	1/1:7,2:10:24.08:1584,24,0	0/0:24,0:24:63.22:0,63,2612	0/0:22,0:22:63.20:0,63,2415	1/1:4,4:8:18.06:1134,18,0	1/1:3,0:3:6.02:355,6,0	1/1:3,2:5:6.02:295,6,0	1/1:1,4:5:12.04:844,12,0	1/1:6,1:7:9.03:558,9,0	0/0:24,0:24:66.20:0,66,2777	1/1:1,0:1:3.01:68,3,0	1/1:4,2:6:12.04:868,12,0	1/1:13,8:20:42.14:2471,42,0	1/1:1,0:1:3.01:132,3,0	0/0:16,0:16:42.14:0,42,1817	0/0:18,0:18:48.16:0,48,2054	0/0:25,0:24:72.23:0,72,3012	0/0:18,0:18:54.19:0,54,2471	0/1:10,2:12:99:1628,0,112	1/1:13,2:14:33.11:1938,33,0	1/1:2,1:3:3.01:237,3,0
chr10	101361831	.	TTGTC	T	4577.83	PASS	AB=0.556;AC=27;AF=0.519;AN=52;BaseQRankSum=13.614;DP=386;FS=34.136;HRun=0;HaplotypeScore=106.1640;InbreedingCoeff=0.8490;MQ=92.92;MQ0=0;MQRankSum=-13.849;QD=41.24;ReadPosRankSum=0.479;VQSLOD=3.0473;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:3.01:58,3,0	1/1:0,5:5:15.01:252,15,0	0/0:27,0:27:81.28:0,81,2110	0/0:12,0:12:34.67:0,35,801	0/0:31,0:31:93.32:0,93,2516	0/0:38,0:38:99:0,114,2993	0/0:25,0:25:69.24:0,69,1891	1/1:0,9:9:27.09:523,27,0	1/1:0,12:12:33.07:601,33,0	0/0:24,0:24:69.24:0,69,1876	0/0:19,0:19:57.20:0,57,1559	1/1:1,9:10:18.06:348,18,0	1/1:1,2:3:9.03:164,9,0	1/1:0,6:6:12.04:232,12,0	1/1:0,6:6:14.97:214,15,0	1/1:0,7:7:15.05:290,15,0	0/0:26,0:26:78.27:0,78,2133	./.	1/1:1,6:7:18.03:312,18,0	1/1:1,15:17:38.79:450,39,0	./.	0/0:13,0:13:36.12:0,36,986	0/0:16,0:16:48.16:0,48,1314	0/0:24,0:23:72.25:0,72,1972	0/0:20,0:20:57.20:0,57,1475	0/1:2,8:10:99:435,0,134	1/1:0,17:17:39:641,39,0	1/1:0,1:1:3.01:58,3,0
chr10	101361917	.	TTAAG	T	6234.46	PASS	AB=0.593;AC=31;AF=0.554;AN=56;BaseQRankSum=14.626;DP=399;FS=224.139;HRun=0;HaplotypeScore=115.4723;InbreedingCoeff=0.8877;MQ=72.52;MQ0=0;MQRankSum=-14.905;QD=42.41;ReadPosRankSum=1.041;VQSLOD=0.6634;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:21.07:384,21,0	1/1:1,4:5:12.04:223,12,0	0/0:14,0:14:35.85:0,36,716	0/0:9,0:10:23.75:0,24,411	0/0:26,0:26:72.21:0,72,1776	0/0:35,0:35:99:0,102,2693	0/0:16,0:16:42.14:0,42,1100	1/1:2,7:9:24.08:434,24,0	1/1:1,5:6:9.03:152,9,0	0/0:22,0:22:63.21:0,63,1588	0/0:17,0:17:51.18:0,51,1295	1/1:1,8:9:18.06:318,18,0	1/1:0,7:7:15.05:267,15,0	1/1:2,6:8:15.05:279,15,0	1/1:0,18:18:51.17:941,51,0	1/1:1,9:10:24.08:451,24,0	0/0:32,0:32:90.31:0,90,2354	1/1:0,2:2:6.02:113,6,0	1/1:2,11:13:27.09:510,27,0	1/1:0,10:10:27.09:507,27,0	1/1:0,6:6:12.04:223,12,0	0/0:20,0:20:60.21:0,60,1514	0/0:14,0:14:42.14:0,42,1108	0/0:27,0:27:78.25:0,78,2024	0/0:19,0:19:57.18:0,57,1403	0/1:5,11:16:41.88:624,0,42	1/1:2,13:15:30.10:523,30,0	1/1:0,5:5:15.05:284,15,0
chr10	101361947	.	TCC	T	2734.57	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=15.004;DP=432;FS=199.422;HRun=3;HaplotypeScore=119.9018;InbreedingCoeff=0.9068;MQ=91.04;MQ0=0;MQRankSum=-14.868;QD=17.42;ReadPosRankSum=2.706;VQSLOD=-0.6747;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,7:9:21.01:193,21,0	1/1:0,3:3:9:78,9,0	0/0:20,0:20:57.19:0,57,1072	0/0:24,0:24:64.40:0,64,1128	0/0:22,0:22:63.22:0,63,1214	0/0:33,0:33:99:0,99,1912	0/0:17,0:17:51.15:0,51,920	1/1:4,12:16:36.05:345,36,0	1/1:0,5:5:3:26,3,0	0/0:22,0:22:66.23:0,66,1270	0/0:20,0:20:57.20:0,57,1097	1/1:3,5:8:3:26,3,0	1/1:1,6:7:9:78,9,0	1/1:1,6:7:14.99:128,15,0	1/1:5,17:22:45.02:415,45,0	1/1:0,8:8:18:158,18,0	0/0:31,0:31:93.30:0,93,1733	1/1:0,3:3:9.01:90,9,0	1/1:1,10:11:24.04:232,24,0	1/1:2,13:15:38.87:346,39,0	1/1:2,6:8:15.01:152,15,0	0/0:21,0:21:63.21:0,63,1182	0/0:16,0:16:45.15:0,45,862	0/0:26,0:26:75.26:0,75,1449	0/0:23,0:23:69.24:0,69,1315	1/1:2,11:13:33.03:309,33,0	1/1:1,16:17:33.03:325,33,0	1/1:3,2:5:6.01:56,6,0
chr10	101361951	.	AGATCC	A	4789.57	PASS	AB=0.593;AC=24;AF=0.429;AN=56;BaseQRankSum=15.233;DP=453;FS=183.561;HRun=0;HaplotypeScore=139.4041;InbreedingCoeff=0.3853;MQ=91.86;MQ0=0;MQRankSum=-14.523;QD=28.51;ReadPosRankSum=3.315;VQSLOD=1.6369;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,7:10:21.07:326,21,0	1/1:0,3:3:9.03:141,9,0	0/0:23,0:23:66.22:0,66,1809	0/0:23,0:23:40.81:0,41,1700	0/0:23,0:23:69.24:0,69,2114	0/0:34,0:34:99:0,102,3197	0/0:17,0:17:51.18:0,51,1569	0/1:4,12:16:42.69:546,0,43	1/1:0,5:5:3.01:47,3,0	0/0:23,0:23:69.24:0,69,2138	0/0:21,0:21:60.21:0,60,1837	1/1:1,5:6:3.01:47,3,0	0/1:4,6:10:7.68:130,0,8	0/1:4,6:10:20.89:211,0,21	1/1:1,17:18:27.20:681,27,0	1/1:0,8:8:18.06:283,18,0	0/0:33,0:33:99:0,99,2945	0/1:1,3:4:11.63:132,0,12	0/1:3,10:13:41.47:365,0,41	1/1:3,13:16:39.13:586,39,0	0/1:4,6:10:1.97:227,0,2	0/0:23,0:23:66.23:0,66,2035	0/0:15,0:15:45.15:0,45,1373	0/0:25,0:25:75.26:0,75,2388	0/0:25,0:25:72.08:0,72,2156	0/1:5,11:16:46.92:499,0,47	0/1:5,16:21:26.56:470,0,27	1/1:0,2:2:6.02:98,6,0
chr10	101363411	.	C	CT	12614.15	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-18.248;DP=680;FS=0.000;HRun=0;HaplotypeScore=62.6099;InbreedingCoeff=0.9976;MQ=83.38;MQ0=0;MQRankSum=-0.939;QD=43.95;ReadPosRankSum=0.995;VQSLOD=5.2020;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,1885	1/1:0,16:16:42.14:672,42,0	0/0:17,0:17:46.96:0,47,617	0/0:21,0:21:63.20:0,63,848	0/0:27,0:27:78.22:0,78,1066	0/0:15,0:15:45.15:0,45,626	0/0:19,0:19:51.17:0,51,712	1/1:2,31:33:93.30:1463,93,0	0/0:30,0:30:90.29:0,90,1239	0/0:29,0:29:84.27:0,84,1160	0/0:10,0:10:30.09:0,30,402	0/0:21,0:21:63.21:0,63,880	0/0:24,0:24:69.23:0,69,963	1/1:0,38:38:99:1727,108,0	1/1:1,23:23:57.19:911,57,0	0/0:27,0:27:81.26:0,81,1113	0/0:21,0:21:63.21:0,63,881	1/1:0,21:20:57.19:911,57,0	1/1:0,21:21:63.20:983,63,0	1/1:0,32:32:93.32:1487,93,0	1/1:1,29:30:81.28:1295,81,0	0/0:22,0:22:63.18:0,63,858	0/0:29,0:29:81.27:0,81,1131	0/0:22,0:22:63.21:0,63,880	0/0:12,0:11:36.12:0,36,502	1/1:1,26:27:78.23:1200,78,0	1/1:1,36:37:99:1726,108,0	1/1:1,7:8:15.05:240,15,0
chr10	101363524	.	C	CG	8965.38	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=13.312;DP=653;FS=12.999;HRun=3;HaplotypeScore=78.4735;InbreedingCoeff=0.9999;MQ=86.98;MQ0=0;MQRankSum=-2.580;QD=36.01;ReadPosRankSum=0.373;VQSLOD=4.1854;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1353	1/1:1,15:16:39.13:546,39,0	0/0:21,0:21:54.16:0,54,639	0/0:23,0:23:39.75:0,40,679	0/0:29,0:29:84.26:0,84,1007	0/0:20,0:20:57.16:0,57,671	0/0:15,0:15:39.12:0,39,468	1/1:7,24:31:69.20:931,69,0	0/0:20,0:20:57.17:0,57,684	0/0:30,0:30:84.26:0,84,1006	0/0:26,0:26:69.17:0,69,810	0/0:19,0:19:57.15:0,57,669	0/0:21,0:21:63.19:0,63,755	1/1:2,24:26:57.19:792,57,0	1/1:3,30:33:81.27:1122,81,0	0/0:22,0:22:57.16:0,57,672	0/0:27,0:27:75.20:0,75,885	1/1:1,22:23:64.46:877,64,0	1/1:1,22:23:66.21:907,66,0	1/1:3,22:25:66.18:900,66,0	1/1:0,18:18:54.18:756,54,0	0/0:26,0:26:78.24:0,78,935	0/0:30,0:30:87.24:0,87,1029	0/0:13,0:13:39.12:0,39,468	0/0:23,0:23:66.18:0,66,779	1/1:1,16:17:48.16:671,48,0	1/1:4,23:27:75.25:1043,75,0	1/1:0,10:10:30.10:420,30,0
chr10	101363743	.	G	GA	355.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.482;DP=764;FS=1.199;HRun=1;HaplotypeScore=81.8763;InbreedingCoeff=0.9979;MQ=90.12;MQ0=0;MQRankSum=-1.959;QD=35.52;ReadPosRankSum=1.212;VQSLOD=3.8797;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,1622	1/1:0,10:10:30.10:450,30,0	0/0:34,0:34:93.23:0,93,1134	0/0:25,0:25:56.20:0,56,690	0/0:32,0:32:93.29:0,93,1192	0/0:27,0:27:78.25:0,78,1012	0/0:26,0:26:78.25:0,78,1013	0/0:37,0:37:99:0,108,1349	0/0:23,0:23:69.17:0,69,864	0/0:33,0:33:99:0,99,1271	0/0:13,0:13:30.10:0,30,390	0/0:27,0:27:81.26:0,81,1052	0/0:18,0:18:54.16:0,54,685	0/0:27,0:27:78.25:0,78,1012	0/0:29,0:29:87.28:0,87,1129	0/0:14,0:14:42.14:0,42,545	0/0:35,0:35:99:0,102,1324	0/0:26,0:26:75.21:0,75,955	0/0:29,0:28:84.26:0,84,1076	0/0:24,0:24:72.23:0,72,934	0/0:40,0:40:99:0,117,1519	0/0:34,0:34:99:0,99,1285	0/0:34,0:34:99:0,102,1323	0/0:28,0:28:84.27:0,84,1090	0/0:23,0:23:69.20:0,69,869	0/0:28,0:28:84.25:0,84,1065	0/0:34,0:34:99:0,102,1306	0/0:10,0:10:27.09:0,27,351
chr10	101364618	.	T	TA	852.14	PASS	AB=1.000;AC=33;AF=0.917;AN=36;BaseQRankSum=-0.088;DP=93;FS=10.617;HRun=1;HaplotypeScore=29.3389;InbreedingCoeff=0.0487;MQ=52.84;MQ0=4;MQRankSum=-2.858;QD=11.36;ReadPosRankSum=-0.854;VQSLOD=0.1287;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:5,0:2:13.81:14,0,28	0/0:5,0:3:5.91:0,6,38	./.	1/1:1,2:3:6.02:71,6,0	1/1:4,5:6:1.35:75,1,0	./.	./.	1/1:2,1:3:6.02:86,6,0	1/1:1,6:3:6.02:68,6,0	1/1:3,4:7:6.02:72,6,0	1/1:1,2:3:3.01:34,3,0	1/1:0,1:1:3.01:32,3,0	./.	./.	1/1:3,3:5:3.01:45,3,0	./.	1/1:1,0:1:3.01:33,3,0	1/1:0,3:2:3.01:38,3,0	./.	1/1:1,6:6:2.98:21,3,0	./.	1/1:3,3:4:6.01:57,6,0	1/1:0,5:4:6.02:76,6,0	1/1:1,0:1:3.01:36,3,0	1/1:2,2:4:6:69,6,0	1/1:1,3:3:9.03:121,9,0
chr10	101364627	.	AG	A	721.25	PASS	AC=30;AF=0.833;AN=36;BaseQRankSum=1.470;DP=78;FS=7.976;HRun=6;HaplotypeScore=31.4924;InbreedingCoeff=0.3394;MQ=79.93;MQ0=1;MQRankSum=-3.804;QD=14.72;ReadPosRankSum=0.350;VQSLOD=1.6785;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:5,0:3:5.58:0,6,33	0/0:7,1:6:6.84:0,7,65	./.	1/1:0,2:2:6:54,6,0	0/0:2,4:5:1.25:0,1,3	./.	./.	1/1:1,1:2:3.01:33,3,0	1/1:0,8:4:9:88,9,0	1/1:1,4:5:6:52,6,0	1/1:0,2:2:3.01:33,3,0	1/1:0,2:2:6.02:67,6,0	1/1:0,1:1:3.01:35,3,0	./.	./.	./.	1/1:0,1:1:3.01:37,3,0	1/1:0,3:2:6.02:67,6,0	./.	1/1:1,5:6:5.75:48,6,0	./.	1/1:2,2:2:5.75:46,6,0	1/1:1,4:4:6.01:59,6,0	1/1:0,1:1:3.01:37,3,0	1/1:1,2:3:6.02:67,6,0	1/1:0,4:3:9.03:102,9,0
chr10	101364632	.	TG	T	841.96	PASS	AB=0.909;AC=33;AF=0.917;AN=36;BaseQRankSum=2.290;DP=80;FS=11.927;HRun=4;HaplotypeScore=30.3687;InbreedingCoeff=-0.0036;MQ=88.28;MQ0=0;MQRankSum=-3.247;QD=13.36;ReadPosRankSum=2.945;VQSLOD=0.9649;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:5,2:4:1.25:0,1,3	0/1:9,1:7:17.72:39,0,18	./.	1/1:0,2:2:6.02:70,6,0	1/1:0,5:4:3.01:36,3,0	./.	./.	1/1:0,2:2:6.02:72,6,0	1/1:1,7:4:9.03:106,9,0	1/1:1,4:5:9.03:106,9,0	1/1:0,2:2:3.01:35,3,0	1/1:0,2:2:6.02:70,6,0	1/1:1,0:1:2.96:19,3,0	./.	./.	./.	1/1:1,0:1:2.94:18,3,0	1/1:4,0:3:5.92:38,6,0	./.	1/1:3,3:6:6.02:71,6,0	./.	1/1:1,2:2:6.02:67,6,0	1/1:1,3:4:6.02:71,6,0	1/1:2,0:2:2.94:19,3,0	1/1:2,0:2:5.88:36,6,0	1/1:4,0:3:8.87:56,9,0
chr10	101364636	.	GA	G	679.46	PASS	AB=0.977;AC=32;AF=0.842;AN=38;BaseQRankSum=1.295;DP=90;FS=0.000;HRun=2;HaplotypeScore=33.9712;InbreedingCoeff=-0.0524;MQ=79.46;MQ0=0;MQRankSum=-1.482;QD=8.94;ReadPosRankSum=4.042;VQSLOD=1.2090;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	1/1:4,1:3:3.45:10,3,0	0/1:9,1:7:56.97:60,0,57	./.	1/1:2,0:2:5.78:32,6,0	1/1:6,0:5:2.68:11,3,0	./.	./.	0/1:5,0:5:18.19:18,0,28	1/1:8,1:5:8.77:50,9,0	1/1:4,1:5:8.87:64,9,0	0/1:3,0:3:11.22:11,0,13	0/1:4,0:4:9.15:24,0,9	1/1:0,1:1:3.01:39,3,0	./.	0/0:3,0:3:2.97:0,3,20	./.	1/1:0,1:1:3.01:39,3,0	1/1:1,4:4:6.02:77,6,0	./.	1/1:3,3:6:5.87:35,6,0	./.	1/1:3,0:2:5.90:37,6,0	1/1:3,0:3:5.90:37,6,0	1/1:0,2:2:5.85:52,6,0	1/1:0,2:2:6.02:77,6,0	1/1:0,4:3:9.03:116,9,0
chr10	101364661	.	AGG	A	490.12	PASS	AB=1.000;AC=13;AF=0.271;AN=48;BaseQRankSum=1.431;DP=146;FS=4.990;HRun=7;HaplotypeScore=54.0138;InbreedingCoeff=0.5198;MQ=89.59;MQ0=2;MQRankSum=-0.556;QD=10.00;ReadPosRankSum=0.095;VQSLOD=-0.3212;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:4:9.03:0,9,130	0/0:2,0:2:3.01:0,3,40	0/1:18,0:11:30.03:30,0,159	0/0:15,0:10:4.56:0,5,178	0/0:3,0:3:6.02:0,6,77	0/0:5,0:3:3.01:0,3,41	0/0:7,0:5:3.01:0,3,39	1/1:1,4:3:6.02:66,6,0	./.	0/0:4,0:4:6.02:0,6,83	0/0:8,0:5:12.04:0,12,167	0/0:5,0:5:6.02:0,6,75	0/0:5,0:5:9.02:0,9,108	0/0:5,0:5:15.05:0,15,191	1/1:0,4:3:6.02:65,6,0	0/0:3,0:3:3.48:0,3,41	0/0:6,0:6:9.03:0,9,113	./.	./.	1/1:2,3:6:12.03:126,12,0	./.	0/0:7,0:6:3.01:0,3,40	0/0:8,0:8:12.04:0,12,141	0/0:3,0:2:6.02:0,6,72	0/0:4,0:4:6.02:0,6,90	1/1:1,6:7:12.03:134,12,0	1/1:0,4:4:12.01:122,12,0	1/1:0,4:3:9.02:100,9,0
chr10	101364671	.	TA	T	2003.97	PASS	AB=0.850;AC=45;AF=0.938;AN=48;BaseQRankSum=-1.795;DP=145;FS=48.747;HRun=2;HaplotypeScore=50.3487;InbreedingCoeff=0.1940;MQ=99.16;MQ0=2;MQRankSum=-6.078;QD=16.16;ReadPosRankSum=3.812;VQSLOD=0.8449;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:4:6.02:77,6,0	1/1:0,3:3:3.01:39,3,0	0/0:19,1:13:27.51:0,28,209	0/1:14,3:11:18.30:18,0,125	1/1:0,5:5:11.93:115,12,0	1/1:1,5:4:3.01:39,3,0	1/1:0,4:3:3.01:39,3,0	1/1:2,5:4:9.03:106,9,0	./.	1/1:0,2:2:6.02:77,6,0	1/1:1,7:6:12.04:152,12,0	1/1:0,5:5:6.02:77,6,0	1/1:0,5:5:9.03:115,9,0	1/1:0,5:5:15.05:193,15,0	1/1:0,5:4:9.03:102,9,0	1/1:0,3:3:3.01:39,3,0	1/1:0,5:5:9.03:116,9,0	./.	./.	1/1:1,4:6:9.02:95,9,0	./.	1/1:0,4:4:3.01:39,3,0	1/1:1,7:9:17.38:183,17,0	1/1:0,2:2:6.02:77,6,0	1/1:1,2:3:5.97:58,6,0	1/1:0,6:6:12.03:137,12,0	1/1:0,4:4:12.01:123,12,0	1/1:0,4:3:9.03:102,9,0
chr10	101364683	.	TG	T	2252.65	PASS	AB=1.000;AC=50;AF=0.962;AN=52;BaseQRankSum=-2.244;DP=161;FS=33.095;HRun=3;HaplotypeScore=46.0528;InbreedingCoeff=-0.0315;MQ=85.69;MQ0=3;MQRankSum=-5.328;QD=14.17;ReadPosRankSum=2.828;VQSLOD=1.1908;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:5:9.03:101,9,0	1/1:0,3:3:6.02:73,6,0	0/1:18,0:11:28.05:28,0,179	0/1:15,0:9:4.84:5,0,93	1/1:0,6:6:12.03:137,12,0	1/1:0,7:5:3.01:33,3,0	1/1:1,5:5:9.03:101,9,0	1/1:4,6:6:15.04:170,15,0	./.	1/1:0,3:3:9.03:102,9,0	1/1:0,8:6:15.04:166,15,0	1/1:1,4:5:2.49:28,2,0	1/1:0,6:6:12.03:133,12,0	1/1:0,5:5:15.04:166,15,0	1/1:0,5:4:9.02:99,9,0	1/1:0,3:3:3.01:33,3,0	1/1:0,5:5:9.01:91,9,0	1/1:0,2:1:3.01:33,3,0	1/1:1,2:3:3.01:33,3,0	1/1:0,4:5:8.92:83,9,0	./.	1/1:0,6:6:6.02:67,6,0	1/1:1,7:9:15.04:175,15,0	1/1:0,4:3:6.02:69,6,0	1/1:0,3:3:6.02:70,6,0	1/1:0,6:6:12.03:136,12,0	1/1:1,4:5:11.98:117,12,0	1/1:0,4:3:9.03:101,9,0
chr10	101364760	.	A	AC	521.11	PASS	AB=0.784;AC=9;AF=0.161;AN=56;BaseQRankSum=6.895;DP=351;FS=16.981;HRun=0;HaplotypeScore=69.3932;InbreedingCoeff=0.0836;MQ=56.45;MQ0=9;MQRankSum=-6.279;QD=4.65;ReadPosRankSum=5.076;VQSLOD=1.5759;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:14:30.32:0,30,195	0/0:5,0:5:15.03:0,15,177	0/0:20,0:11:20.04:0,20,170	0/0:22,0:12:21.25:0,21,174	0/0:19,0:19:42.87:0,43,412	0/0:9,0:9:23.98:0,24,275	0/0:7,0:7:16.77:0,17,154	0/1:27,3:30:71.44:196,0,71	0/0:7,0:7:17.10:0,17,119	0/0:17,0:17:41.98:0,42,431	0/0:14,0:14:36:0,36,381	0/0:8,0:7:11.88:0,12,83	0/0:10,0:9:26.82:0,27,201	0/0:9,0:9:26.82:0,27,198	0/1:8,4:12:29.98:46,0,30	0/0:6,0:6:11.89:0,12,82	0/0:14,0:14:31.41:0,31,295	0/1:5,2:6:27.27:27,0,37	0/1:13,5:16:26.85:120,0,27	0/1:3,8:11:8.17:85,0,8	0/1:3,0:3:10.46:11,0,10	0/0:16,0:16:35.74:0,36,366	0/0:10,0:10:23.92:0,24,205	0/0:10,0:9:18.85:0,19,205	0/0:13,0:13:27.07:0,27,249	0/1:10,8:17:34:65,0,34	1/1:4,9:13:8.77:111,9,0	0/0:5,0:5:14.73:0,15,124
chr10	101364764	.	A	AACAAAAAC	6745.02	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-2.764;DP=368;FS=24.695;HRun=0;HaplotypeScore=112.2742;InbreedingCoeff=0.7363;MQ=56.61;MQ0=8;MQRankSum=-7.114;QD=43.52;ReadPosRankSum=3.708;VQSLOD=2.6620;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:14:34.33:67,0,34	0/0:5,0:5:15.04:0,15,337	0/0:20,0:11:26.59:0,27,309	0/0:23,0:12:29.95:0,30,336	0/0:19,0:19:47.95:0,48,694	0/0:10,0:10:25.88:0,26,516	0/0:7,0:7:17.22:0,17,276	1/1:28,3:31:52.74:1297,53,0	0/1:7,0:7:11.58:12,0,110	0/0:15,0:15:42.06:0,42,672	0/0:15,0:15:36.04:0,36,643	0/0:9,0:8:15:0,15,266	0/0:13,0:12:30.03:0,30,469	0/0:9,0:9:24.01:0,24,448	1/1:8,4:12:33.04:690,33,0	0/1:9,0:9:5.07:5,0,38	0/0:16,0:16:34.56:0,35,597	1/1:7,2:8:17.79:326,18,0	1/1:13,5:17:42.06:955,42,0	1/1:3,8:11:33.11:965,33,0	1/1:3,0:3:6.02:121,6,0	0/0:17,0:17:35.62:0,36,667	0/0:10,0:10:27.01:0,27,381	0/0:12,0:11:24.07:0,24,479	0/0:13,0:13:33.05:0,33,582	1/1:12,8:19:53.85:1171,54,0	1/1:4,9:13:33.11:1042,33,0	1/1:5,0:5:1.91:94,2,0
chr10	101365034	.	A	AT	84.68	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.233;DP=563;FS=1.372;HRun=8;HaplotypeScore=52.6378;InbreedingCoeff=0.9502;MQ=79.32;MQ0=0;MQRankSum=-0.610;QD=12.10;ReadPosRankSum=-0.562;VQSLOD=2.4030;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:83.99:0,84,761	1/1:1,6:7:15.04:173,15,0	0/0:12,0:12:29.22:0,29,249	0/0:19,0:19:24.99:0,25,241	0/0:30,0:30:78.04:0,78,714	0/0:19,0:19:48:0,48,435	0/0:11,0:11:14.98:0,15,132	0/0:30,0:30:72.02:0,72,655	0/0:21,0:21:54.01:0,54,494	0/0:22,0:22:57.02:0,57,519	0/0:18,0:18:45.01:0,45,407	0/0:23,0:23:63.03:0,63,577	0/0:18,0:18:48.02:0,48,439	0/0:20,0:20:51.02:0,51,467	0/0:19,0:19:57.03:0,57,522	0/0:22,0:22:60.03:0,60,549	0/0:28,0:28:69.03:0,69,631	0/0:24,0:24:66.02:0,66,604	0/0:20,0:20:19.30:0,19,432	0/0:19,0:19:51.03:0,51,467	0/0:7,0:7:18.01:0,18,165	0/0:20,0:20:60.03:0,60,549	0/0:14,0:14:30.01:0,30,275	0/0:19,0:19:57.03:0,57,521	0/0:18,0:18:45.02:0,45,412	0/0:32,0:32:93.05:0,93,851	0/0:30,0:30:56.44:0,56,660	0/0:9,0:9:24.01:0,24,220
chr10	101365301	.	GAA	G	7247.93	PASS	AB=0.567;AC=26;AF=0.464;AN=56;BaseQRankSum=3.632;DP=686;FS=7.667;HRun=12;HaplotypeScore=95.1401;InbreedingCoeff=0.8340;MQ=72.02;MQ0=1;MQRankSum=-0.286;QD=20.08;ReadPosRankSum=5.321;VQSLOD=3.9276;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,1:49:56.21:0,56,319	0/0:1,0:6:12.48:0,12,44	0/0:12,0:14:16.30:0,16,181	0/0:9,0:9:4.15:0,4,81	0/0:17,0:24:59.90:0,60,646	0/0:15,0:18:50.13:0,50,652	0/0:25,0:26:68.68:0,69,933	1/1:9,21:31:63.02:626,63,0	0/1:7,2:25:9.07:9,0,178	0/0:25,0:27:68.64:0,69,879	0/0:25,0:29:71.72:0,72,1014	1/1:1,21:22:53.81:549,54,0	1/1:4,26:29:65.85:671,66,0	1/1:2,34:38:92.67:908,93,0	1/1:5,28:33:66.12:671,66,0	0/1:5,1:26:32.61:33,0,116	0/0:25,0:28:63.15:0,63,843	1/1:0,9:10:29.81:286,30,0	1/1:5,16:24:11.30:441,11,0	1/1:7,19:27:56.82:561,57,0	1/1:5,21:26:62:620,62,0	0/0:25,0:25:63.12:0,63,858	0/0:24,1:26:35.19:0,35,869	0/0:21,0:23:62.65:0,63,808	0/0:21,0:21:51.16:0,51,725	1/1:0,24:24:72.16:732,72,0	1/1:1,28:30:74.90:744,75,0	1/1:2,13:15:39.07:397,39,0
chr10	101367291	.	AAC	A	209	PASS	AB=0.931;AC=17;AF=0.531;AN=32;BaseQRankSum=1.705;DP=385;FS=0.000;HRun=0;HaplotypeScore=54.7348;InbreedingCoeff=0.1511;MQ=69.12;MQ0=9;MQRankSum=0.050;QD=1.36;ReadPosRankSum=1.507;VQSLOD=1.1306;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	0/0:21,0:21:9:0,9,85	0/1:19,1:19:5.12:5,0,78	./.	1/1:6,0:6:4.25:30,4,0	0/0:11,0:11:6.02:0,6,79	./.	./.	0/0:10,0:10:3.01:0,3,42	./.	./.	0/1:8,0:8:0:0,0,0	0/1:25,1:27:38.82:39,0,137	1/1:18,3:19:9.02:95,9,0	1/1:11,0:10:3:25,3,0	./.	1/1:19,1:20:3.01:32,3,0	0/1:10,0:10:25.15:25,0,38	0/0:6,0:6:2.99:0,3,23	0/1:11,5:15:25.62:26,0,38	0/0:19,0:20:12.03:0,12,152	./.	1/1:6,0:7:4.09:17,4,0	1/1:3,4:7:3.01:32,3,0
chr10	101367512	.	GT	G	4440.15	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=6.454;DP=514;FS=9.376;HRun=9;HaplotypeScore=72.8934;InbreedingCoeff=0.9336;MQ=64.75;MQ0=11;MQRankSum=-6.863;QD=20.00;ReadPosRankSum=0.517;VQSLOD=5.1093;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,12:18:44.90:399,45,0	1/1:4,6:10:26.98:235,27,0	0/0:42,0:18:14.57:0,15,239	0/0:43,0:20:25.90:0,26,223	0/0:25,0:24:66.19:0,66,753	0/0:22,0:21:48.14:0,48,553	0/0:14,0:14:26.08:0,26,317	1/1:11,12:23:47.37:420,47,0	1/1:3,11:14:1.40:266,1,0	0/0:13,0:13:33.09:0,33,370	0/0:17,0:17:48.14:0,48,554	0/0:12,0:12:36.10:0,36,406	0/0:11,0:11:33.07:0,33,356	1/1:3,18:20:48.02:437,48,0	1/1:3,6:9:21:191,21,0	1/1:6,13:19:29.87:461,30,0	0/0:30,0:30:77.59:0,78,872	1/1:6,10:16:5.22:271,5,0	1/1:10,12:21:47.02:405,47,0	1/1:10,15:25:34.10:434,34,0	1/1:4,2:4:9:82,9,0	0/0:13,0:12:30.09:0,30,346	0/0:11,0:11:20.30:0,20,232	0/0:9,0:9:27.08:0,27,311	0/0:28,0:29:66.03:0,66,741	1/1:7,10:17:10.28:341,10,0	1/1:4,11:15:39.02:355,39,0	1/1:3,3:6:17.78:141,18,0
chr10	101367536	.	C	CTT	3881.81	PASS	AB=0.773;AC=24;AF=0.429;AN=56;BaseQRankSum=4.532;DP=503;FS=3.049;HRun=12;HaplotypeScore=90.8541;InbreedingCoeff=0.6593;MQ=62.00;MQ0=4;MQRankSum=-4.847;QD=16.04;ReadPosRankSum=-3.789;VQSLOD=2.1295;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:21:25.58:109,0,26	1/1:2,0:8:15.02:143,15,0	0/0:27,0:12:5.67:0,6,30	0/1:23,0:15:8.97:26,0,9	0/0:19,0:22:41.29:0,41,401	0/0:20,0:21:35.51:0,36,359	0/0:15,0:15:22.97:0,23,199	1/1:16,11:28:44.58:529,45,0	0/1:8,0:13:36.37:104,0,36	0/0:18,0:18:38.96:0,39,360	0/0:15,0:15:29.93:0,30,277	0/0:10,0:12:20.51:0,21,215	0/0:13,0:14:4.77:0,5,203	0/0:12,0:18:32.44:0,32,151	1/1:4,5:10:17.54:204,18,0	0/1:11,1:20:35.96:187,0,36	0/0:29,0:29:68.84:0,69,633	1/1:5,11:18:29.54:322,30,0	1/1:8,12:19:35.66:493,36,0	1/1:9,16:27:59.53:683,60,0	1/1:1,3:4:12.03:153,12,0	0/0:14,0:14:29.88:0,30,272	0/0:7,0:9:14.69:0,15,185	0/0:12,0:14:13.71:0,14,231	0/0:23,0:28:43.89:0,44,395	1/1:4,12:18:14.27:445,14,0	1/1:9,6:17:33:358,33,0	1/1:6,5:11:9.03:126,9,0
chr10	101369008	.	GA	G	4856.56	PASS	AB=0.929;AC=21;AF=0.375;AN=56;BaseQRankSum=6.546;DP=662;FS=9.090;HRun=9;HaplotypeScore=80.4934;InbreedingCoeff=0.9450;MQ=70.28;MQ0=0;MQRankSum=1.380;QD=21.30;ReadPosRankSum=0.451;VQSLOD=5.2616;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,147,1677	0/0:6,0:6:15.04:0,15,173	0/0:13,0:13:18.44:0,18,162	0/1:12,1:13:2.94:3,0,192	0/0:27,0:27:66.15:0,66,747	0/0:21,0:21:57.17:0,57,658	0/0:31,0:31:81.22:0,81,924	1/1:3,23:26:69.03:631,69,0	0/0:15,0:15:42.08:0,42,470	0/0:34,0:34:93.23:0,93,1051	0/0:20,0:20:42.12:0,42,485	0/0:26,0:26:75.19:0,75,851	0/0:27,0:27:75.22:0,75,860	1/1:5,30:35:81.04:741,81,0	1/1:4,17:21:54.02:494,54,0	0/0:18,0:18:51.12:0,51,574	0/0:29,0:29:78.20:0,78,877	1/1:6,18:24:57.02:522,57,0	1/1:3,14:17:39:357,39,0	1/1:6,11:17:33.01:302,33,0	1/1:0,23:23:69.04:632,69,0	0/0:32,0:32:81.20:0,81,920	0/0:16,0:16:36.10:0,36,407	0/0:39,0:38:99:0,102,1147	0/0:26,0:26:69.16:0,69,781	1/1:7,24:31:78.03:709,78,0	1/1:2,10:12:30.01:274,30,0	1/1:2,7:9:21:191,21,0
chr10	101369074	.	G	GC	11842.77	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-8.829;DP=556;FS=3.290;HRun=1;HaplotypeScore=63.2450;InbreedingCoeff=0.9888;MQ=73.25;MQ0=0;MQRankSum=-3.217;QD=39.09;ReadPosRankSum=2.409;VQSLOD=5.6375;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,37:38:99:1454,99,0	1/1:0,5:5:9.03:135,9,0	0/0:9,0:9:21.04:0,21,246	0/0:12,0:12:18.01:0,18,176	0/0:11,0:11:30.10:0,30,388	0/0:20,0:20:60.19:0,60,774	0/0:31,0:31:87.28:0,87,1128	1/1:2,23:25:69.22:1013,69,0	1/1:1,23:24:66.22:988,66,0	0/0:19,0:19:42.13:0,42,539	0/0:19,0:19:54.16:0,54,683	1/1:0,23:23:69.19:1007,69,0	1/1:0,24:24:66.22:986,66,0	0/0:32,0:32:90.27:0,90,1142	1/1:2,13:15:39.13:583,39,0	1/1:1,19:20:48.16:716,48,0	0/0:26,0:26:75.20:0,75,937	1/1:3,22:25:69.23:1032,69,0	1/1:1,7:8:24.08:358,24,0	1/1:0,11:11:30.10:449,30,0	1/1:2,27:29:69.22:1013,69,0	0/0:16,0:16:45.14:0,45,569	0/0:11,0:11:33.09:0,33,414	0/0:27,0:26:78.25:0,78,1012	0/0:20,0:20:57.18:0,57,738	1/1:4,21:25:18.24:766,18,0	1/1:0,20:20:57.19:850,57,0	1/1:0,11:11:33.11:493,33,0
chr10	101369307	.	A	AT	21682.32	PASS	AC=52;AF=1.000;AN=52;DP=576;FS=0.000;HRun=1;HaplotypeScore=136.0493;InbreedingCoeff=-0.0001;MQ=35.21;MQ0=0;QD=38.24;VQSLOD=4.2600;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,36:40:99:1472,102,0	1/1:3,8:11:30.10:446,30,0	./.	./.	1/1:3,22:25:69.02:945,69,0	1/1:3,27:30:84.25:1211,84,0	1/1:4,15:19:54.09:721,54,0	1/1:4,18:22:57.15:826,57,0	1/1:0,18:17:51.17:760,51,0	1/1:3,30:34:93.29:1358,93,0	1/1:1,22:23:60.20:893,60,0	1/1:0,19:19:54.18:806,54,0	1/1:2,23:25:69.14:962,69,0	1/1:2,24:26:72.23:1052,72,0	1/1:2,18:20:54.10:758,54,0	1/1:0,19:19:54.18:805,54,0	1/1:3,15:18:48.03:663,48,0	1/1:2,8:10:27.01:355,27,0	1/1:3,16:16:45.14:648,45,0	1/1:2,14:16:42.14:618,42,0	1/1:7,9:17:35.99:423,36,0	1/1:6,26:32:87.09:1174,87,0	1/1:3,14:17:48.15:695,48,0	1/1:1,15:17:39.13:565,39,0	1/1:3,18:21:51.15:738,51,0	1/1:3,30:32:90.27:1320,90,0	1/1:1,24:26:72.23:1041,72,0	1/1:1,9:10:30.08:427,30,0
chr10	101369722	.	TC	T	2806.17	PASS	AB=0.828;AC=10;AF=0.179;AN=56;BaseQRankSum=10.614;DP=562;FS=0.879;HRun=1;HaplotypeScore=149.2222;InbreedingCoeff=0.7294;MQ=70.45;MQ0=5;MQRankSum=-6.902;QD=22.45;ReadPosRankSum=-3.434;VQSLOD=2.6479;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,10:19:33.42:437,0,33	0/0:10,0:10:27.02:0,27,295	0/1:19,0:17:36.36:36,0,273	0/0:27,0:20:21.05:0,21,407	0/0:32,0:32:91.16:0,91,1326	0/0:26,0:26:78.26:0,78,1185	0/0:17,0:16:48.16:0,48,733	0/0:26,0:25:69.16:0,69,973	1/1:5,16:21:31.97:620,32,0	0/0:19,0:19:57.17:0,57,826	0/0:22,0:22:66.18:0,66,943	1/1:8,7:23:7.36:477,7,0	1/1:8,5:15:38.24:452,38,0	0/0:12,0:11:24.08:0,24,363	0/0:20,0:19:57.17:0,57,818	1/1:2,25:28:47.03:949,47,0	0/0:19,0:18:51.11:0,51,704	0/0:14,0:12:23.40:0,23,350	0/0:19,0:18:45.07:0,45,637	0/0:18,0:18:45.15:0,45,656	0/0:8,0:7:15.02:0,15,187	0/0:17,0:17:48.62:0,49,713	0/0:20,0:20:60.16:0,60,879	0/0:31,0:31:84.19:0,84,1230	0/0:24,0:24:69.19:0,69,1009	0/0:20,0:20:60.17:0,60,841	0/0:18,0:18:51.16:0,51,739	0/0:18,0:18:50.33:0,50,635
chr10	101369731	.	CTT	C	1384.09	PASS	AB=0.910;AC=9;AF=0.161;AN=56;BaseQRankSum=9.427;DP=586;FS=0.000;HRun=3;HaplotypeScore=178.6759;InbreedingCoeff=0.3145;MQ=61.78;MQ0=12;MQRankSum=-5.361;QD=9.75;ReadPosRankSum=-1.242;VQSLOD=-0.3663;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,3:19:10.96:276,11,0	0/1:8,3:11:24.40:227,0,24	0/0:11,0:9:13.06:0,13,119	0/0:23,0:16:10.12:0,10,164	0/0:35,0:34:90.90:0,91,1291	0/0:24,0:24:69.19:0,69,1159	0/0:17,0:16:39.79:0,40,605	0/0:30,0:24:54.68:0,55,509	0/1:16,7:23:15.31:376,0,15	0/0:22,0:20:35.51:0,36,518	0/0:25,0:25:70.32:0,70,895	0/0:23,0:23:22.60:0,23,248	0/1:14,0:14:46.02:46,0,126	0/0:14,0:12:23.73:0,24,234	0/0:17,0:16:30.34:0,30,494	1/1:24,10:34:13.12:581,13,0	0/0:21,0:20:60.13:0,60,925	0/0:12,0:9:7:0,7,202	0/1:23,0:22:0.74:1,0,269	0/0:20,0:20:6.27:0,6,229	0/0:9,0:8:12:0,12,111	0/0:23,0:23:56:0,56,737	0/0:20,0:20:55.18:0,55,701	0/0:31,0:31:73.82:0,74,1090	0/0:26,0:26:64.71:0,65,1030	0/0:24,0:24:55.16:0,55,711	0/1:18,0:17:18.09:18,0,303	0/0:17,0:16:44.90:0,45,458
chr10	101369733	.	TTC	T	829.48	PASS	AB=0.982;AC=14;AF=0.269;AN=52;BaseQRankSum=9.359;DP=596;FS=18.856;HRun=0;HaplotypeScore=189.1960;InbreedingCoeff=0.2069;MQ=60.22;MQ0=14;MQRankSum=-8.224;QD=3.77;ReadPosRankSum=-2.182;VQSLOD=1.3238;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:28.71:217,29,0	0/1:11,0:11:26.42:73,0,26	./.	./.	0/0:35,1:35:34.69:0,35,926	0/0:25,0:25:60.15:0,60,850	0/1:16,1:16:4.51:5,0,311	0/0:29,0:23:12.03:0,12,82	1/1:22,0:22:18.16:237,18,0	0/1:18,2:18:41.96:42,0,239	0/0:25,0:25:45.11:0,45,612	0/0:23,0:23:14.96:0,15,239	0/0:14,0:14:22.23:0,22,188	0/0:14,0:13:11.14:0,11,77	0/1:19,0:18:4.26:4,0,135	1/1:34,0:34:18.15:242,18,0	0/0:23,0:21:58.41:0,58,822	0/1:13,0:10:9.27:9,0,49	0/1:23,0:23:45.48:45,0,110	0/1:22,0:22:34.25:87,0,34	0/0:11,0:9:3.01:0,3,43	0/0:22,0:23:5.60:0,6,504	0/0:18,0:18:30.10:0,30,458	0/0:28,2:30:16.63:0,17,649	0/0:24,3:27:19.67:0,20,720	0/0:28,0:27:43.46:0,43,343	0/1:19,0:18:30.29:30,0,63	0/0:16,0:15:20.61:0,21,145
chr10	101369735	.	C	CTT	2806.35	PASS	AB=0.957;AC=17;AF=0.304;AN=56;BaseQRankSum=10.376;DP=595;FS=0.354;HRun=3;HaplotypeScore=188.1363;InbreedingCoeff=0.1796;MQ=58.78;MQ0=17;MQRankSum=-7.076;QD=10.28;ReadPosRankSum=0.136;VQSLOD=0.1146;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,1:17:5.76:154,6,0	0/0:11,0:11:3.52:0,4,136	0/0:10,0:8:14.63:0,15,123	0/0:22,0:15:2.50:0,2,165	0/0:35,0:34:57.98:0,58,1100	0/0:24,0:24:72.15:0,72,950	0/0:18,0:17:23.84:0,24,409	0/1:29,0:22:27.64:231,0,28	0/1:22,0:22:27.73:83,0,28	0/0:17,1:16:9.47:0,9,396	0/0:26,0:26:68.21:0,68,804	0/0:23,0:23:10.96:0,11,410	0/0:14,0:14:31.44:0,31,314	0/1:14,0:13:35.47:35,0,77	1/1:13,4:16:30.96:503,31,0	0/1:33,0:34:93.33:173,0,93	0/0:23,0:21:59.73:0,60,832	0/1:11,2:10:21.63:139,0,22	0/1:22,0:23:36.59:312,0,37	0/1:21,0:24:8.60:310,0,9	0/1:12,0:9:31.06:64,0,31	0/0:24,0:24:59.09:0,59,699	0/0:18,0:18:47.19:0,47,592	0/0:29,0:29:66:0,66,818	0/0:27,0:27:75.01:0,75,933	0/1:27,2:26:99:312,0,130	1/1:17,0:18:28.24:325,28,0	1/1:11,5:15:30.27:341,30,0
chr10	101369764	.	TC	T	5025.78	PASS	AB=0.702;AC=19;AF=0.365;AN=52;BaseQRankSum=13.290;DP=542;FS=6.870;HRun=2;HaplotypeScore=167.7683;InbreedingCoeff=0.0064;MQ=43.69;MQ0=16;MQRankSum=-11.609;QD=15.46;ReadPosRankSum=-0.726;VQSLOD=4.1217;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:8,12:20:0.80:534,0,1	0/1:2,7:9:4.65:269,0,5	./.	./.	0/0:28,0:28:80.57:0,81,1107	0/0:24,0:24:59.98:0,60,843	0/0:20,1:20:39.98:0,40,718	0/1:32,6:25:99:168,0,239	0/1:5,19:24:44.39:503,0,44	0/0:20,0:19:57.17:0,57,793	0/0:18,0:18:54.18:0,54,804	1/1:6,17:23:25.85:679,26,0	0/1:4,11:15:33.40:351,0,33	1/1:8,8:14:23.31:309,23,0	0/1:11,12:22:99:306,0,149	0/1:15,15:30:51.42:551,0,51	0/0:21,2:21:9.08:0,9,698	1/1:9,2:8:5.11:120,5,0	0/1:17,9:25:99:279,0,211	0/1:16,5:21:36.23:194,0,36	0/1:6,4:7:62.62:63,0,65	0/0:18,0:18:54.16:0,54,769	0/0:14,0:14:41.99:0,42,518	0/0:21,0:21:54.18:0,54,783	0/0:22,0:21:60.20:0,60,869	0/1:18,9:24:76.99:366,0,77	0/1:13,7:18:1.49:301,0,1	0/1:10,2:11:33.81:34,0,116
chr10	101369765	.	C	CTTT	6821.13	PASS	AB=0.958;AC=24;AF=0.462;AN=52;BaseQRankSum=13.459;DP=532;FS=6.093;HRun=3;HaplotypeScore=182.8047;InbreedingCoeff=0.3408;MQ=43.63;MQ0=16;MQRankSum=-11.201;QD=21.32;ReadPosRankSum=-1.032;VQSLOD=1.3505;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:26.71:645,27,0	0/1:8,1:9:0.61:258,0,1	./.	./.	0/0:27,0:27:80.61:0,81,1330	0/0:20,0:20:60.16:0,60,993	0/0:20,0:20:39.98:0,40,826	0/1:36,0:23:74.54:266,0,75	1/1:24,0:24:3.55:673,4,0	0/0:20,0:19:57.17:0,57,963	0/0:18,0:18:54.18:0,54,964	1/1:23,0:23:22.78:686,23,0	1/1:16,0:16:3.42:433,3,0	1/1:11,2:14:23.73:419,24,0	0/1:17,2:20:99:465,0,128	1/1:30,0:30:64.62:759,65,0	0/0:22,0:21:22.23:0,22,821	1/1:10,1:8:10.18:176,10,0	0/1:26,1:26:99:461,0,122	0/1:19,1:20:39.29:294,0,39	0/1:10,0:7:72.19:109,0,72	0/0:19,0:19:54.16:0,54,922	0/0:14,0:14:42:0,42,595	0/0:20,0:20:54.18:0,54,902	0/0:22,0:21:60.20:0,60,1047	0/1:25,2:24:92.06:602,0,92	1/1:15,2:16:5.19:530,5,0	0/1:12,0:11:45.84:46,0,74
chr10	101369773	.	T	TC	424.04	PASS	AB=0.895;AC=6;AF=0.111;AN=54;BaseQRankSum=8.543;DP=535;FS=10.616;HRun=1;HaplotypeScore=176.6579;InbreedingCoeff=-0.1300;MQ=44.02;MQ0=12;MQRankSum=-7.033;QD=3.24;ReadPosRankSum=2.349;VQSLOD=-0.7223;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,2:20:49.22:49,0,332	0/0:7,0:7:15.47:0,15,225	./.	0/0:3,0:1:2.99:0,3,24	0/0:26,0:26:78.22:0,78,983	0/0:23,0:23:69:0,69,854	0/0:21,0:20:54.17:0,54,689	0/0:41,0:30:78.10:0,78,943	0/1:18,6:24:99:119,0,340	0/0:19,0:18:54.17:0,54,691	0/0:16,0:16:48.16:0,48,622	0/1:23,0:23:91.14:91,0,298	0/1:16,2:18:72.76:73,0,212	0/1:17,0:15:1.64:2,0,338	0/0:21,0:20:45.13:0,45,566	0/1:20,9:29:99:206,0,404	0/0:23,0:21:57.15:0,57,708	0/0:10,0:8:4.55:0,5,182	0/0:31,0:30:84.13:0,84,987	0/0:21,0:21:41.71:0,42,516	0/0:10,0:7:14.78:0,15,135	0/0:19,0:19:54.18:0,54,701	0/0:12,0:12:36.11:0,36,454	0/0:20,0:20:54.16:0,54,685	0/0:21,0:20:57.19:0,57,739	0/0:27,0:24:63.19:0,63,781	0/0:16,0:14:37.35:0,37,441	0/0:12,0:12:30.08:0,30,371
chr10	101369777	.	T	TC	622.72	PASS	AB=0.897;AC=5;AF=0.089;AN=56;BaseQRankSum=7.700;DP=542;FS=0.636;HRun=1;HaplotypeScore=166.2455;InbreedingCoeff=-0.1160;MQ=44.96;MQ0=9;MQRankSum=-6.013;QD=5.51;ReadPosRankSum=0.042;VQSLOD=0.0643;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,2:19:97.89:98,0,302	0/0:7,0:7:20.60:0,21,197	0/0:6,0:1:3:0,3,29	0/0:4,0:2:6:0,6,62	0/0:27,0:27:78.23:0,78,985	0/0:25,0:25:66.21:0,66,840	0/0:20,0:19:54.16:0,54,686	0/0:39,0:30:87.27:0,87,1091	0/1:23,1:24:86.39:86,0,345	0/0:21,0:20:54.17:0,54,690	0/0:16,0:16:48.15:0,48,611	0/1:14,7:21:99:279,0,268	0/1:17,3:20:99:171,0,277	0/0:19,0:17:35.08:0,35,437	0/0:21,0:20:45.14:0,45,567	0/1:29,0:29:99:106,0,416	0/0:22,0:20:57.12:0,57,690	0/0:9,0:8:4.55:0,5,168	0/0:31,0:30:81.22:0,81,1021	0/0:21,0:21:46.95:0,47,573	0/0:10,0:7:15.05:0,15,193	0/0:21,0:21:60.07:0,60,715	0/0:14,0:14:42.11:0,42,516	0/0:21,0:21:57.12:0,57,694	0/0:20,0:20:54.18:0,54,700	0/0:26,0:23:63.20:0,63,793	0/0:17,0:15:42.11:0,42,508	0/0:12,0:12:30.04:0,30,350
chr10	101369786	.	CTCT	C	208.01	PASS	AB=0.900;AC=4;AF=0.071;AN=56;BaseQRankSum=8.116;DP=554;FS=2.214;HRun=0;HaplotypeScore=179.6801;InbreedingCoeff=-0.0842;MQ=47.20;MQ0=7;MQRankSum=-6.815;QD=2.74;ReadPosRankSum=1.017;VQSLOD=2.7940;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:75.55:76,0,251	0/1:2,4:6:60.65:151,0,61	0/0:9,0:3:8.86:0,9,155	0/0:6,0:4:12.04:0,12,247	0/0:32,0:32:96.33:0,96,2181	0/0:25,0:25:32.32:0,32,1533	0/0:19,0:19:54.19:0,54,1270	0/0:39,0:34:95.37:0,95,890	0/1:22,0:22:25.98:26,0,238	0/0:25,0:24:72.25:0,72,1667	0/0:17,0:17:51.18:0,51,1169	0/0:19,0:19:40.84:0,41,329	0/0:19,0:19:36.07:0,36,392	0/0:21,0:19:46.34:0,46,370	0/0:24,0:23:55.31:0,55,551	0/1:29,0:29:64.57:65,0,351	0/0:23,0:21:56.40:0,56,1095	0/0:8,0:7:8.07:0,8,137	0/0:25,0:24:68.32:0,68,645	0/0:23,0:23:49.16:0,49,523	0/0:9,0:7:14.59:0,15,122	0/0:20,0:20:60.21:0,60,1326	0/0:15,0:15:45.15:0,45,1028	0/0:21,0:21:57.15:0,57,1255	0/0:21,0:21:60.18:0,60,1335	0/0:27,0:24:64.83:0,65,802	0/0:21,0:19:52.52:0,53,476	0/0:10,0:10:20.55:0,21,224
chr10	101370287	.	TG	T	4993.28	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-12.373;DP=601;FS=6.666;HRun=9;HaplotypeScore=79.6707;InbreedingCoeff=0.9748;MQ=80.42;MQ0=0;MQRankSum=-3.052;QD=22.39;ReadPosRankSum=3.593;VQSLOD=5.6903;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:26:11.30:0,11,56	1/1:2,11:13:33.02:302,33,0	0/0:23,0:20:13.96:0,14,317	0/0:23,0:23:33.95:0,34,408	0/0:8,0:30:54.50:0,55,321	0/0:8,0:28:42.81:0,43,237	0/0:7,0:21:40.15:0,40,224	1/1:7,17:24:50.98:456,51,0	0/0:7,0:20:11.79:0,12,68	0/0:3,0:14:34.61:0,35,234	0/0:9,0:18:20.05:0,20,117	0/0:4,0:16:17.04:0,17,86	0/0:3,0:17:17.11:0,17,87	0/0:7,0:22:40.17:0,40,237	1/1:4,23:27:72.03:657,72,0	0/0:11,0:18:11.36:0,11,58	0/0:6,0:24:42.61:0,43,217	1/1:2,19:21:51.02:467,51,0	1/1:2,18:20:54.03:494,54,0	1/1:5,16:21:44.95:397,45,0	1/1:3,22:25:57.03:521,57,0	0/0:6,0:15:17.50:0,17,131	0/0:6,0:19:28.84:0,29,182	0/0:3,0:25:54.27:0,54,300	0/0:5,0:18:17.04:0,17,87	1/1:2,30:32:83.88:746,84,0	1/1:3,25:28:46.46:679,46,0	1/1:2,10:12:30.01:275,30,0
chr10	101371628	.	CTG	C	709.34	PASS	AB=0.819;AC=12;AF=0.250;AN=48;BaseQRankSum=3.459;DP=275;FS=5.250;HRun=0;HaplotypeScore=69.6817;InbreedingCoeff=-0.0392;MQ=31.31;MQ0=9;MQRankSum=-2.895;QD=6.39;ReadPosRankSum=4.578;VQSLOD=2.0997;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:7:0.03:0,0,0	0/0:13,0:12:11.54:0,12,80	./.	./.	0/0:13,0:12:2.67:0,3,49	0/0:10,0:10:6.39:0,6,117	0/0:19,0:17:15:0,15,242	0/1:18,4:10:63.42:63,0,242	0/0:2,0:1:2.22:0,2,7	0/1:14,0:12:63.95:64,0,259	./.	1/1:5,0:5:1.24:3,1,0	1/1:3,0:3:2.84:15,3,0	0/0:10,0:10:12.03:0,12,198	0/0:5,5:10:3.48:0,3,59	0/0:8,0:8:0.30:0,0,4	0/0:10,0:9:8.95:0,9,171	0/1:3,2:5:75.01:75,0,123	0/1:2,4:6:21.71:122,0,22	0/0:6,3:9:3.48:0,3,38	./.	0/0:20,0:19:3:0,3,25	0/0:15,0:15:3:0,3,58	0/0:8,0:7:5.92:0,6,115	0/1:13,0:13:0.01:1,0,0	0/1:7,9:16:99:366,0,134	0/1:12,6:17:69.84:117,0,70	0/0:2,0:2:5.89:0,6,67
chr10	101371630	.	GTC	G	448.71	PASS	AB=0.941;AC=9;AF=0.188;AN=48;BaseQRankSum=4.642;DP=282;FS=5.145;HRun=0;HaplotypeScore=69.8326;InbreedingCoeff=-0.0605;MQ=31.35;MQ0=10;MQRankSum=-3.319;QD=4.53;ReadPosRankSum=3.584;VQSLOD=1.8003;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:7:0.03:0,0,0	0/0:13,0:12:14.81:0,15,94	./.	./.	0/0:7,6:12:2.67:0,3,53	0/0:6,4:10:6.39:0,6,107	0/0:14,5:17:15.05:0,15,251	0/1:19,4:11:29.53:30,0,291	0/0:2,0:1:2.22:0,2,7	0/1:9,5:12:99:162,0,270	./.	./.	0/0:3,0:3:0.67:0,1,2	0/0:7,4:11:12.04:0,12,208	0/0:10,0:10:3.48:0,3,54	1/1:8,0:8:3.27:13,3,0	0/0:7,3:9:11.91:0,12,178	0/1:5,0:5:38.22:38,0,109	0/1:6,0:6:45:62,0,45	0/0:10,0:10:3.48:0,3,54	0/0:4,0:2:3.01:0,3,33	0/0:9,11:19:3.01:0,3,48	0/0:5,10:15:3:0,3,53	0/0:8,0:7:5.92:0,6,106	0/0:6,7:13:0.21:0,0,0	0/1:16,0:16:99:184,0,142	0/1:18,0:17:74.97:75,0,92	0/0:2,0:2:5.93:0,6,60
chr10	101371640	.	C	CTCTG	582.49	PASS	AB=0.985;AC=15;AF=0.300;AN=50;BaseQRankSum=6.093;DP=324;FS=20.118;HRun=0;HaplotypeScore=101.2534;InbreedingCoeff=-0.0153;MQ=33.04;MQ0=12;MQRankSum=-5.826;QD=3.94;ReadPosRankSum=5.291;VQSLOD=0.3108;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,1:8:0.13:0,0,0	0/1:13,0:12:10.66:117,0,11	./.	./.	0/0:12,0:11:6.02:0,6,104	0/0:15,0:14:8.76:0,9,138	0/0:19,1:18:18.06:0,18,325	0/1:24,0:12:94.05:94,0,386	1/1:2,1:2:3.01:42,3,0	0/1:16,0:14:62.66:63,0,375	./.	0/0:9,0:7:3.72:0,4,15	1/1:7,0:7:3.01:54,3,0	0/0:13,0:13:20.96:0,21,295	0/1:11,0:11:1.21:1,0,82	1/1:7,2:11:4.29:77,4,0	0/0:11,0:10:17.81:0,18,249	0/1:5,0:5:23.65:24,0,164	0/1:9,0:9:40.38:40,0,135	0/0:11,0:11:2.14:0,2,55	0/0:5,0:3:2.84:0,3,56	0/0:21,0:20:6.02:0,6,105	0/0:17,0:17:5.87:0,6,82	0/0:10,0:9:12.04:0,12,218	0/0:15,0:15:5.77:0,6,77	0/1:18,0:18:99:116,0,247	0/1:20,1:20:89.17:89,0,174	0/0:3,0:2:4.56:0,5,46
chr10	101371650	.	C	CTG	1286.28	PASS	AB=0.807;AC=12;AF=0.231;AN=52;BaseQRankSum=5.901;DP=360;FS=19.515;HRun=0;HaplotypeScore=92.9550;InbreedingCoeff=-0.0679;MQ=33.30;MQ0=27;MQRankSum=-7.190;QD=8.87;ReadPosRankSum=4.325;VQSLOD=1.8152;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,1:8:0.47:2,0,0	1/1:11,2:12:14.25:159,14,0	./.	./.	0/0:8,5:12:5.91:0,6,92	0/0:16,4:19:23.93:0,24,340	0/0:19,2:19:18.04:0,18,275	0/1:23,4:14:89.32:89,0,334	0/1:5,0:3:0.88:1,0,9	0/1:12,5:14:99:255,0,291	0/0:5,7:12:3.01:0,3,45	0/0:9,3:9:5.91:0,6,38	0/1:10,2:11:25.93:36,0,26	0/0:8,4:12:21.07:0,21,312	0/0:6,5:11:4.94:0,5,55	0/0:9,4:12:2.78:0,3,12	0/0:10,3:12:20.96:0,21,308	0/1:3,2:5:32.94:97,0,33	0/1:7,3:9:91.52:150,0,92	0/0:9,3:12:2.28:0,2,26	0/0:7,0:4:5.94:0,6,42	0/0:11,11:20:6.02:0,6,92	0/0:9,6:15:5.88:0,6,92	0/0:13,0:12:18.03:0,18,233	0/0:9,5:14:6.02:0,6,91	0/1:10,9:19:99:461,0,143	0/1:17,6:22:53.82:171,0,54	0/0:3,0:1:2.97:0,3,20
chr10	101371656	.	GTC	G	306.81	PASS	AB=0.957;AC=19;AF=0.365;AN=52;BaseQRankSum=1.385;DP=409;FS=6.398;HRun=0;HaplotypeScore=97.9941;InbreedingCoeff=0.1488;MQ=33.37;MQ0=38;MQRankSum=0.630;QD=1.52;ReadPosRankSum=0.118;VQSLOD=1.3169;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:8:1.96:0,2,7	0/1:14,0:13:0.08:0,0,0	./.	./.	0/0:14,0:13:5.68:0,6,86	0/1:17,5:21:41.31:41,0,210	0/1:20,3:21:41.55:42,0,97	0/0:30,0:15:2.68:0,3,19	0/0:5,0:3:4.63:0,5,16	0/0:18,0:15:24.34:0,24,197	0/0:12,0:12:2.97:0,3,20	0/0:14,0:10:9.03:0,9,30	0/0:14,0:12:8.65:0,9,37	1/1:13,0:12:20.99:182,21,0	1/1:16,0:14:4.64:26,5,0	0/0:13,0:12:0.67:0,1,8	0/0:13,0:12:17.90:0,18,214	1/1:5,0:5:6.79:39,7,0	0/1:15,0:14:17:17,0,62	1/1:19,0:18:1.81:12,2,0	1/1:8,0:4:0.14:10,0,0	0/0:22,0:20:8.71:0,9,47	0/0:18,0:19:8.96:0,9,115	0/1:14,0:13:16.51:17,0,157	0/0:13,0:13:5.67:0,6,57	0/1:22,0:22:38.42:38,0,78	0/1:28,0:26:16.03:16,0,80	1/1:3,0:1:2.84:14,3,0
chr10	101371679	.	TCTCTCTC	T	2163.13	PASS	AB=0.980;AC=19;AF=0.339;AN=56;BaseQRankSum=-2.397;DP=483;FS=0.000;HRun=0;HaplotypeScore=102.5321;InbreedingCoeff=0.1452;MQ=44.09;MQ0=81;MQRankSum=0.936;QD=9.49;ReadPosRankSum=2.229;VQSLOD=1.6478;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:8:2.58:15,3,0	0/0:11,0:7:2.99:0,3,25	0/0:28,0:9:8.06:0,8,97	0/0:31,0:6:4.73:0,5,34	0/0:14,0:15:11.83:0,12,287	0/0:26,0:25:43.38:0,43,932	0/0:23,0:21:9.29:0,9,543	0/1:16,0:8:20.96:70,0,21	0/1:12,0:7:5.92:19,0,6	0/0:15,0:12:22.88:0,23,570	0/0:9,0:9:3.01:0,3,50	0/1:13,0:8:2.61:3,0,17	0/1:17,0:11:3.57:4,0,11	0/1:19,0:15:6.30:103,0,6	1/1:16,3:14:11.73:236,12,0	0/0:13,0:10:2.46:0,2,11	0/0:15,0:14:27.08:0,27,624	0/1:9,0:6:30.42:209,0,30	0/1:16,2:16:99:353,0,197	1/1:18,1:15:7.58:130,8,0	1/1:12,0:6:5.18:159,5,0	0/0:22,0:19:8.47:0,8,152	0/0:19,0:19:14.33:0,14,300	0/0:18,0:16:27.97:0,28,632	0/0:10,0:10:7.38:0,7,159	0/1:20,1:16:99:383,0,273	0/1:28,1:27:99:562,0,163	1/1:4,3:3:3.01:80,3,0
chr10	101371680	.	CTCTCT	C	1075.10	PASS	AB=0.959;AC=14;AF=0.250;AN=56;BaseQRankSum=0.763;DP=484;FS=3.520;HRun=0;HaplotypeScore=98.5577;InbreedingCoeff=0.1608;MQ=44.04;MQ0=83;MQRankSum=-1.432;QD=6.04;ReadPosRankSum=1.799;VQSLOD=1.4481;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:8:1.49:0,1,4	0/0:11,0:7:2.99:0,3,25	0/0:29,0:9:8.49:0,8,73	0/1:32,0:6:15.68:16,0,26	0/0:15,0:15:11.78:0,12,246	0/0:25,0:24:43.12:0,43,774	0/0:24,0:22:20.46:0,20,437	0/1:16,0:8:17.86:55,0,18	0/0:12,0:7:7.12:0,7,37	0/0:16,0:13:1.49:0,1,530	0/0:8,0:8:3.01:0,3,51	0/0:13,0:8:11.40:0,11,74	0/0:18,0:11:13.82:0,14,78	0/0:19,0:15:7.15:0,7,25	1/1:17,1:13:7.80:113,8,0	0/0:13,0:10:3.82:0,4,34	0/0:14,0:13:26.88:0,27,565	0/1:8,1:6:30.32:145,0,30	0/1:18,0:16:99:185,0,198	1/1:15,2:13:4.03:53,4,0	1/1:12,0:6:6.48:94,6,0	0/0:23,0:20:8.49:0,8,187	0/0:19,0:19:9.89:0,10,257	0/0:18,0:16:26.30:0,26,541	0/0:11,0:11:6.22:0,6,148	0/1:19,1:15:99:209,0,275	0/1:25,3:26:99:308,0,170	1/1:7,0:3:3.01:48,3,0
chr10	101371683	.	TCTC	T	1397.96	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=2.916;DP=480;FS=0.773;HRun=0;HaplotypeScore=87.7452;InbreedingCoeff=0.3157;MQ=46.18;MQ0=83;MQRankSum=1.665;QD=5.18;ReadPosRankSum=5.272;VQSLOD=1.3945;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:8:2.63:13,3,0	0/1:7,0:3:0.01:0,0,0	0/0:36,0:12:10.42:0,10,128	0/0:35,0:8:5.41:0,5,63	0/0:14,0:14:11.74:0,12,179	0/0:26,0:25:40.79:0,41,559	0/1:23,0:21:16.70:17,0,240	0/0:15,0:6:2.61:0,3,18	1/1:12,0:6:6.38:42,6,0	0/0:14,0:11:17.19:0,17,193	0/0:8,0:8:2.97:0,3,20	1/1:13,0:8:2.03:29,2,0	0/1:18,0:11:12.92:25,0,13	1/1:12,7:15:38.35:518,38,0	1/1:18,0:13:14.83:139,15,0	1/1:12,0:9:3.30:16,3,0	0/0:14,0:13:23.93:0,24,398	1/1:9,0:6:7.22:75,7,0	0/1:18,0:17:41.55:140,0,42	1/1:15,0:11:8.64:82,9,0	1/1:12,0:6:5.46:49,5,0	0/1:22,0:19:14.04:14,0,46	0/0:19,0:19:13.85:0,14,194	0/0:18,0:16:24.37:0,24,339	0/0:11,0:11:9.76:0,10,103	0/1:19,0:14:67.22:180,0,67	0/1:28,0:25:47.97:203,0,48	1/1:7,0:3:3.01:31,3,0
chr10	101371685	.	TC	T	1052.99	PASS	AC=32;AF=0.615;AN=52;BaseQRankSum=4.083;DP=466;FS=11.145;HRun=10;HaplotypeScore=77.3752;InbreedingCoeff=0.7026;MQ=48.29;MQ0=81;MQRankSum=0.493;QD=4.37;ReadPosRankSum=4.875;VQSLOD=0.1545;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,7:8:2.67:14,3,0	./.	0/0:39,0:14:11.61:0,12,130	0/0:35,0:8:8.90:0,9,68	0/0:14,0:14:8.85:0,9,98	0/0:27,0:26:17.45:0,17,370	0/0:22,1:21:2.46:0,2,179	0/0:9,5:5:2.80:0,3,13	1/1:2,6:5:8.61:46,9,0	1/1:13,0:12:2.48:9,2,0	./.	1/1:6,6:7:7.47:31,7,0	1/1:8,8:11:7.52:33,8,0	1/1:9,10:15:37.85:278,38,0	1/1:9,9:13:14.83:112,15,0	1/1:2,4:6:7.43:44,7,0	0/0:12,0:11:18.05:0,18,196	1/1:7,2:6:5.65:29,6,0	1/1:11,4:15:20:132,20,0	1/1:12,3:11:8.92:69,9,0	1/1:10,3:7:5.07:27,5,0	1/1:13,8:18:11.99:104,12,0	0/0:19,0:19:10.36:0,10,93	0/0:18,0:16:15.14:0,15,140	0/0:11,0:11:3.27:0,3,21	1/1:9,8:12:20.77:154,21,0	1/1:18,8:23:22.52:136,23,0	1/1:4,2:3:2.92:17,3,0
chr10	101371686	.	C	CT	1275.90	PASS	AB=0.979;AC=33;AF=0.611;AN=54;BaseQRankSum=5.210;DP=432;FS=4.958;HRun=1;HaplotypeScore=69.9732;InbreedingCoeff=0.6095;MQ=51.65;MQ0=81;MQRankSum=-1.297;QD=5.43;ReadPosRankSum=4.401;VQSLOD=0.9647;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,3:7:2.84:32,3,0	0/1:6,0:2:0:0,0,0	0/0:41,0:15:11.58:0,12,130	0/0:37,0:9:9.64:0,10,78	0/0:13,0:13:12.02:0,12,132	0/0:26,0:25:53.38:0,53,531	0/0:20,0:19:15.20:0,15,306	1/1:17,1:9:2.85:21,3,0	1/1:11,1:6:9.90:51,10,0	0/1:12,0:11:9.71:10,0,41	./.	1/1:9,2:6:7.73:51,8,0	1/1:17,1:11:12.24:67,12,0	1/1:18,0:14:27.85:180,28,0	1/1:14,2:11:13.52:104,14,0	1/1:8,0:5:5.68:29,6,0	0/0:11,0:10:24.05:0,24,273	1/1:4,4:5:6.49:76,6,0	1/1:11,2:12:20.21:181,20,0	1/1:12,1:9:8.99:81,9,0	1/1:7,4:6:5.51:68,6,0	0/1:14,1:12:13.71:16,0,14	0/0:17,0:17:13.37:0,13,128	0/0:19,0:17:27.89:0,28,265	0/0:9,0:9:9.10:0,9,67	1/1:12,2:9:0.08:157,0,0	1/1:14,5:16:28.89:313,29,0	1/1:6,0:3:2.99:24,3,0
chr10	101372908	.	AT	A	2519.34	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.101;DP=519;FS=0.419;HRun=8;HaplotypeScore=58.7684;InbreedingCoeff=0.9939;MQ=75.02;MQ0=0;MQRankSum=-3.635;QD=22.70;ReadPosRankSum=4.165;VQSLOD=3.9348;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:42.07:406,42,0	1/1:0,7:7:14.94:145,15,0	0/0:18,0:16:19.05:0,19,349	0/0:11,0:11:20.07:0,20,196	0/0:31,0:31:84.24:0,84,993	0/0:23,0:23:66.19:0,66,787	0/0:15,0:15:39.09:0,39,447	0/0:37,0:37:93.28:0,93,1111	1/1:1,17:18:51.08:493,51,0	0/0:18,0:18:54.17:0,54,652	0/0:16,0:16:39.12:0,39,471	1/1:0,20:20:54.09:521,54,0	1/1:4,25:29:52.31:621,52,0	0/0:19,0:19:54.16:0,54,643	0/0:10,0:10:30.08:0,30,351	1/1:0,18:18:54.09:522,54,0	0/0:14,0:14:42.12:0,42,497	0/0:20,0:20:57.12:0,57,659	0/0:22,0:22:57.16:0,57,675	0/0:24,0:24:66.19:0,66,786	0/0:11,0:11:33.10:0,33,399	0/0:11,0:11:30.08:0,30,353	0/0:17,0:17:39.11:0,39,458	0/0:10,0:10:30.06:0,30,338	0/0:14,0:14:42.11:0,42,487	0/0:20,0:20:57.17:0,57,680	0/0:32,0:31:87.26:0,87,1038	0/0:15,0:15:36.11:0,36,435
chr10	101373018	.	AT	A	537.95	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.485;DP=438;FS=5.043;HRun=9;HaplotypeScore=41.5725;InbreedingCoeff=0.8857;MQ=73.61;MQ0=0;MQRankSum=-1.458;QD=19.21;ReadPosRankSum=1.202;VQSLOD=3.6179;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,1:18:23.68:0,24,527	1/1:1,10:11:30.01:275,30,0	0/0:9,0:9:14.95:0,15,133	0/0:5,0:5:15.03:0,15,154	0/0:34,0:34:93.28:0,93,1073	0/0:21,0:21:63.17:0,63,717	0/0:7,0:7:21.06:0,21,242	0/0:24,0:24:57.15:0,57,641	0/0:13,0:13:36.09:0,36,404	0/0:18,0:18:54.16:0,54,623	0/0:23,0:23:66.14:0,66,730	0/0:12,0:12:33.10:0,33,381	0/0:18,0:18:45.13:0,45,519	1/1:0,17:17:42.02:384,42,0	0/0:12,0:12:33.10:0,33,381	0/0:13,0:13:36.11:0,36,416	0/0:17,0:17:45.13:0,45,519	0/0:17,0:17:45.06:0,45,490	0/0:10,0:10:27.08:0,27,312	0/0:23,0:23:57.17:0,57,658	0/0:5,0:5:15.04:0,15,173	0/0:11,1:12:2.62:0,3,284	0/0:27,0:27:66.20:0,66,762	0/0:8,0:8:21.06:0,21,242	0/0:11,0:12:35.94:0,36,395	0/0:15,0:15:42.12:0,42,485	0/0:23,0:23:66.20:0,66,762	0/0:14,0:14:42.12:0,42,485
chr10	101373465	.	GA	G	3024.65	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=0.648;DP=615;FS=9.663;HRun=4;HaplotypeScore=97.6510;InbreedingCoeff=0.9995;MQ=80.45;MQ0=0;MQRankSum=-1.661;QD=33.24;ReadPosRankSum=3.478;VQSLOD=3.4950;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:39.13:539,39,0	0/0:13,0:13:29.55:0,30,214	0/0:23,0:23:42.75:0,43,759	0/0:12,0:12:32.64:0,33,387	0/0:33,0:33:99:0,99,1444	0/0:16,0:16:42.12:0,42,592	0/0:13,0:13:39.12:0,39,551	0/0:21,0:21:56.46:0,56,539	1/1:0,15:15:42.14:585,42,0	0/0:32,0:32:90.16:0,90,1179	0/0:24,0:24:72.23:0,72,1034	1/1:0,23:23:63.21:877,63,0	1/1:0,18:18:45.15:626,45,0	0/0:20,0:20:57.16:0,57,795	0/0:25,0:25:57.09:0,57,589	1/1:0,16:16:42.14:573,42,0	0/0:25,0:25:75.15:0,75,998	0/0:21,0:21:51.09:0,51,544	0/0:27,0:27:78.16:0,78,833	0/0:24,0:24:69.07:0,69,687	0/0:12,0:12:27.07:0,27,289	0/0:18,0:18:54.14:0,54,733	0/0:28,0:28:84.23:0,84,1148	0/0:22,0:22:66.19:0,66,923	0/0:27,0:27:81.25:0,81,1139	0/0:31,0:31:88.89:0,89,901	0/0:26,0:26:69.12:0,69,711	0/0:31,0:31:84.17:0,84,865
chr10	101373466	.	A	AG	1895.41	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=9.690;DP=614;FS=1.165;HRun=7;HaplotypeScore=102.4296;InbreedingCoeff=0.9078;MQ=82.30;MQ0=0;MQRankSum=-1.666;QD=7.61;ReadPosRankSum=-0.778;VQSLOD=0.7812;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:3.44:3,0,14	1/1:3,10:13:24.07:288,24,0	0/0:24,0:24:27.26:0,27,414	0/0:13,1:14:23.95:0,24,213	0/0:33,0:33:99:0,99,955	0/0:16,0:16:39.06:0,39,376	0/0:13,0:13:33.05:0,33,319	1/1:21,0:21:32.39:135,32,0	0/0:15,0:15:12.76:0,13,32	0/0:31,0:31:66.08:0,66,631	0/0:24,0:24:69.01:0,69,646	0/0:24,0:24:18.96:0,19,48	0/0:18,0:18:13.65:0,14,34	0/0:20,0:20:51.08:0,51,493	1/1:24,0:24:42.85:177,43,0	0/0:16,0:16:13.91:0,14,36	0/0:24,0:24:63.05:0,63,599	1/1:22,0:22:45.69:191,46,0	1/1:27,0:27:58.92:244,59,0	1/1:23,0:23:54.07:234,54,0	1/1:13,0:13:24.11:99,24,0	0/0:17,0:17:45.06:0,45,429	0/0:27,0:27:72.11:0,72,695	0/0:22,0:22:60.10:0,60,579	0/0:27,0:27:69.10:0,69,665	1/1:30,0:30:2.30:180,2,0	1/1:26,0:26:59.12:246,59,0	1/1:31,0:31:75.06:311,75,0
chr10	101373467	.	G	GGC	9343.48	PASS	AB=0.537;AC=17;AF=0.304;AN=56;BaseQRankSum=-11.315;DP=617;FS=3.952;HRun=0;HaplotypeScore=89.0962;InbreedingCoeff=0.9184;MQ=81.99;MQ0=0;MQRankSum=-3.038;QD=41.16;ReadPosRankSum=-0.837;VQSLOD=6.4420;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:39.07:0,39,414	0/0:13,0:13:22.44:0,22,112	0/0:23,0:23:51.79:0,52,786	0/0:14,0:14:35.96:0,36,447	0/0:33,0:33:99:0,99,1512	0/0:16,0:16:42.13:0,42,618	0/0:14,0:14:39.12:0,39,558	1/1:5,21:26:59.97:881,60,0	0/0:15,0:15:42.10:0,42,455	0/0:30,0:30:86.46:0,86,1182	0/0:24,0:24:72.23:0,72,1080	0/0:24,0:24:66.04:0,66,684	0/0:18,0:18:45.11:0,45,487	0/0:19,0:19:54.17:0,54,807	1/1:1,22:23:47.96:878,48,0	0/0:16,0:16:42.05:0,42,435	0/0:24,0:24:72.17:0,72,1024	1/1:2,22:25:51.17:927,51,0	1/1:0,24:25:72.18:1249,72,0	1/1:1,22:26:63:1089,63,0	1/1:2,12:14:27.09:494,27,0	0/0:16,0:16:45.15:0,45,688	0/0:26,0:26:75.24:0,75,1126	0/0:22,0:22:63.17:0,63,934	0/0:26,0:26:75.24:0,75,1107	0/1:4,25:29:13.65:1088,0,14	1/1:0,25:26:65.97:1203,66,0	1/1:3,30:33:84.28:1534,84,0
chr10	101374128	.	TA	T	5702.41	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=11.229;DP=527;FS=0.000;HRun=11;HaplotypeScore=57.5535;InbreedingCoeff=0.9452;MQ=71.82;MQ0=1;MQRankSum=-1.120;QD=18.70;ReadPosRankSum=1.872;VQSLOD=5.7589;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:27:56.93:468,57,0	0/0:5,0:5:15.04:0,15,160	0/0:12,0:10:12.01:0,12,119	0/0:15,0:12:24.40:0,24,204	0/0:31,0:33:89.23:0,89,895	0/0:16,0:16:45.11:0,45,479	0/0:8,0:8:21.05:0,21,223	1/1:5,31:37:59.91:688,60,0	1/1:3,17:21:54.79:430,55,0	0/0:19,0:19:45.11:0,45,480	0/0:20,0:20:43.65:0,44,444	1/1:1,7:8:17.98:148,18,0	1/1:2,18:20:50.94:418,51,0	1/1:3,17:22:52:406,52,0	1/1:4,13:17:35.95:296,36,0	1/1:1,21:22:53.82:443,54,0	0/0:25,0:25:69.13:0,69,708	1/1:1,18:19:50.92:418,51,0	1/1:5,13:19:11.76:290,12,0	1/1:5,16:21:47.93:394,48,0	1/1:1,9:10:6.64:198,7,0	0/0:17,0:17:48.11:0,48,505	0/0:25,0:25:69.17:0,69,736	0/0:9,0:9:27.07:0,27,288	0/0:18,0:18:45.11:0,45,474	1/1:4,18:22:1.66:385,2,0	1/1:5,19:25:52.96:425,53,0	1/1:3,12:15:35.93:296,36,0
chr10	101374956	.	GA	G	9398.79	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=19.578;DP=690;FS=8.442;HRun=7;HaplotypeScore=138.0410;InbreedingCoeff=0.9997;MQ=80.02;MQ0=1;MQRankSum=-3.242;QD=25.13;ReadPosRankSum=2.192;VQSLOD=3.3247;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,33:38:87.16:878,87,0	1/1:1,11:12:33.07:337,33,0	0/0:25,1:26:35.32:0,35,720	0/0:17,0:17:39.08:0,39,455	0/0:16,0:16:45.14:0,45,566	0/0:24,0:24:72.21:0,72,882	0/0:15,0:15:39.11:0,39,479	1/1:5,21:26:63.10:623,63,0	1/1:1,22:23:57.13:581,57,0	0/0:30,0:30:84.27:0,84,1056	0/0:25,0:25:69.20:0,69,843	1/1:4,28:32:84.19:857,84,0	1/1:7,27:34:70.41:729,70,0	0/0:29,0:29:72.22:0,72,889	1/1:3,31:34:90.20:918,90,0	1/1:1,20:21:54.12:551,54,0	0/0:21,0:21:60.18:0,60,742	1/1:1,26:27:69.16:704,69,0	1/1:1,12:13:36.05:353,36,0	1/1:1,29:30:81.18:826,81,0	1/1:2,12:13:27.06:275,27,0	0/0:29,0:29:81.26:0,81,1018	0/0:21,0:21:57.16:0,57,693	0/0:31,0:31:81.73:0,82,1020	0/0:32,0:32:87.23:0,87,1052	1/1:2,24:26:34.42:666,34,0	1/1:3,25:28:63.14:642,63,0	1/1:1,15:16:45.10:459,45,0
chr10	101375185	.	AG	A	546.26	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.781;DP=621;FS=8.756;HRun=2;HaplotypeScore=97.2934;InbreedingCoeff=0.8969;MQ=81.88;MQ0=0;MQRankSum=-2.787;QD=32.13;ReadPosRankSum=-0.080;VQSLOD=2.5282;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:33.07:0,33,456	0/0:11,0:11:23.94:0,24,273	0/0:29,0:29:84.25:0,84,1171	0/0:19,0:18:49.04:0,49,702	0/0:27,0:27:81.26:0,81,1186	0/0:21,0:21:63.21:0,63,944	0/0:19,0:19:57.19:0,57,854	0/0:30,0:30:57.02:0,57,684	0/0:20,0:20:29.76:0,30,356	0/0:23,0:23:69.23:0,69,1029	0/0:18,0:18:54.18:0,54,809	0/0:17,0:17:21.03:0,21,282	0/0:17,0:17:24.03:0,24,329	1/1:0,17:17:51.11:641,51,0	0/0:27,0:27:45.05:0,45,589	0/0:25,0:25:39.05:0,39,532	0/0:21,0:21:57.19:0,57,854	0/0:19,0:18:36:0,36,460	0/0:25,0:25:50.61:0,51,611	0/0:36,0:36:45.04:0,45,579	0/0:9,0:9:6.02:0,6,90	0/0:19,0:19:54.18:0,54,809	0/0:20,0:20:60.20:0,60,899	0/0:20,0:20:54.18:0,54,809	0/0:27,0:27:81.27:0,81,1213	0/0:35,0:35:53.99:0,54,671	0/0:36,0:36:57.11:0,57,766	0/0:13,0:13:26.98:0,27,342
chr10	101375855	.	G	GCA	6736.23	PASS	AB=0.579;AC=18;AF=0.321;AN=56;BaseQRankSum=2.150;DP=849;FS=0.000;HRun=0;HaplotypeScore=170.8846;InbreedingCoeff=0.8301;MQ=59.12;MQ0=5;MQRankSum=-1.471;QD=26.01;ReadPosRankSum=-0.702;VQSLOD=5.0292;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:46:80.97:0,81,964	1/1:4,5:9:15.05:243,15,0	0/0:45,0:28:29.86:0,30,292	0/0:41,0:20:20.64:0,21,219	0/0:34,0:34:84.24:0,84,1012	0/0:25,0:25:57.17:0,57,684	0/0:38,0:38:96.26:0,96,1146	1/1:10,21:31:29.62:968,30,0	0/0:27,0:27:60.19:0,60,733	0/0:32,0:33:81.09:0,81,967	0/0:18,0:18:50.83:0,51,598	0/0:46,0:46:99:0,105,1239	0/0:29,0:29:69.22:0,69,843	0/0:37,0:37:90.28:0,90,1099	1/1:7,23:30:69.24:1119,69,0	0/0:23,0:23:39.12:0,39,476	0/0:34,0:34:87.27:0,87,1059	1/1:5,25:30:60.16:934,60,0	1/1:7,4:11:15.05:241,15,0	1/1:5,13:19:27.09:437,27,0	1/1:19,55:76:45.47:1227,45,0	0/0:21,0:21:45.14:0,45,549	0/0:16,0:16:42.13:0,42,513	0/0:44,0:46:67.08:0,67,1227	0/0:31,0:31:81.23:0,81,976	0/1:4,15:19:58.86:630,0,59	1/1:14,16:30:57.19:894,57,0	0/1:1,2:3:30.61:43,0,31
chr10	101375924	.	A	ACATGCACTCATGAGTG	25023.01	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=3.860;DP=893;FS=3.499;HRun=0;HaplotypeScore=400.9711;InbreedingCoeff=0.7777;MQ=49.53;MQ0=24;MQRankSum=-14.188;QD=53.58;ReadPosRankSum=-4.745;VQSLOD=2.9861;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,17:37:2.43:15,2,0	1/1:4,5:9:3.01:63,3,0	0/0:82,0:34:68.95:0,69,2015	0/0:89,0:33:69.87:0,70,2146	0/0:17,0:17:48.15:0,48,1879	0/0:20,0:20:46.86:0,47,2256	0/0:20,0:20:57.20:0,57,2564	0/1:36,0:35:24.43:3663,0,24	1/1:41,0:42:54.18:2358,54,0	0/0:25,0:25:72.22:0,72,2569	0/0:18,0:18:42.10:0,42,1475	1/1:40,0:40:35.68:1708,36,0	1/1:41,0:41:93.25:3643,93,0	1/1:33,2:35:30.48:1332,30,0	1/1:23,5:28:19.88:439,20,0	1/1:31,0:31:39.13:1998,39,0	0/0:38,0:38:99:0,102,4217	0/1:19,0:19:52.82:1712,0,53	1/1:7,6:20:45.14:2194,45,0	1/1:10,0:10:3.88:27,4,0	1/1:69,1:70:20.34:446,20,0	0/0:18,0:18:48.16:0,48,2128	0/0:19,0:19:54.16:0,54,2184	0/0:51,0:51:99:0,123,5016	0/0:29,0:28:72.23:0,72,2970	1/1:22,0:21:54.19:3365,54,0	1/1:19,4:22:35.26:1755,35,0	1/1:3,0:3:9:307,9,0
chr10	101375934	.	A	AT	3671.90	PASS	AB=0.757;AC=17;AF=0.304;AN=56;BaseQRankSum=14.641;DP=820;FS=1.804;HRun=0;HaplotypeScore=234.9422;InbreedingCoeff=0.2529;MQ=46.33;MQ0=35;MQRankSum=-11.434;QD=10.34;ReadPosRankSum=0.111;VQSLOD=3.8508;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:29:3.81:0,4,33	0/0:11,0:11:6.01:0,6,68	0/0:85,0:25:57.93:0,58,814	0/0:86,0:23:59.56:0,60,807	0/0:20,0:19:54.18:0,54,753	0/0:20,0:20:54.18:0,54,750	0/0:22,0:22:66.22:0,66,923	0/1:21,9:28:99:327,0,497	1/1:14,13:36:27.67:482,28,0	0/0:28,0:28:84.25:0,84,1146	0/0:12,0:12:36.12:0,36,503	1/1:12,12:35:41.52:431,42,0	1/1:10,16:36:60.23:907,60,0	0/1:16,11:30:70.61:255,0,71	0/1:17,7:24:8.07:8,0,126	1/1:9,10:28:23.84:328,24,0	0/0:34,0:34:99:0,102,1407	0/1:11,2:12:61.21:61,0,249	0/1:13,0:11:99:155,0,131	0/1:2,5:7:0.15:0,0,0	0/1:40,17:56:99:107,0,109	0/0:19,0:19:54.18:0,54,755	0/0:18,0:18:54.17:0,54,741	0/0:51,0:51:99:0,117,1613	0/0:28,0:27:75.72:0,76,1049	0/1:11,10:21:99:420,0,276	0/1:13,9:21:99:190,0,189	0/0:2,0:2:3.01:0,3,42
chr10	101375935	.	C	CG	3740.12	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=14.602;DP=820;FS=1.322;HRun=0;HaplotypeScore=238.3566;InbreedingCoeff=0.3119;MQ=46.15;MQ0=35;MQRankSum=-11.989;QD=10.60;ReadPosRankSum=1.549;VQSLOD=3.9796;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:1.03:8,1,0	0/0:11,0:11:5.98:0,6,67	0/0:85,0:25:67.08:0,67,737	0/0:86,0:23:59.25:0,59,787	0/0:21,0:20:54.17:0,54,733	0/0:20,0:20:54.14:0,54,733	0/0:22,0:22:66.22:0,66,923	0/1:31,0:28:99:326,0,541	1/1:35,1:36:27.73:521,28,0	0/0:27,0:28:84.27:0,84,1146	0/0:12,0:12:36.12:0,36,503	1/1:33,2:34:41.11:451,41,0	1/1:35,1:36:56.40:901,56,0	0/1:29,0:29:72.87:235,0,73	0/0:23,0:23:11.91:0,12,140	1/1:28,0:28:23.85:352,24,0	0/0:33,0:33:99:0,99,1383	0/1:12,0:11:63.10:63,0,237	0/1:16,0:14:99:181,0,197	0/0:8,0:8:1.47:0,1,4	0/1:57,0:56:99:110,0,103	0/0:20,0:20:54.18:0,54,753	0/0:18,0:18:54.18:0,54,752	0/0:49,1:50:99:0,117,1615	0/0:27,0:27:75.68:0,76,1028	0/1:21,0:20:99:403,0,279	0/1:22,0:21:99:188,0,197	0/0:2,0:2:3.01:0,3,42
chr10	101375936	.	A	AT	1145.03	PASS	AB=0.946;AC=12;AF=0.214;AN=56;BaseQRankSum=14.728;DP=815;FS=5.264;HRun=0;HaplotypeScore=245.7964;InbreedingCoeff=0.5005;MQ=46.18;MQ0=35;MQRankSum=-12.341;QD=4.30;ReadPosRankSum=2.338;VQSLOD=3.0462;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:0.81:0,1,2	0/0:10,0:10:5.98:0,6,66	0/0:78,0:22:49.69:0,50,651	0/0:84,0:22:61.48:0,61,790	0/0:21,0:20:54.16:0,54,729	0/0:20,0:20:54.14:0,54,733	0/0:22,0:22:66.22:0,66,923	0/0:30,0:28:26.31:0,26,596	1/1:25,9:36:25.06:301,25,0	0/0:27,0:27:81.27:0,81,1122	0/0:12,0:12:36.12:0,36,501	1/1:24,11:34:32.15:259,32,0	1/1:24,10:36:29.46:374,29,0	0/1:27,3:30:59.75:60,0,74	0/0:25,0:25:12.69:0,13,139	1/1:19,9:28:17.65:250,18,0	0/0:34,0:34:99:0,99,1369	0/0:11,0:11:6.20:0,6,234	0/0:15,0:13:14.56:0,15,253	0/0:9,0:9:1.15:0,1,4	0/1:46,5:56:42.93:43,0,98	0/0:20,0:20:54.17:0,54,733	0/0:18,0:18:54.18:0,54,752	0/0:49,0:50:99:0,117,1607	0/0:28,0:27:75.51:0,76,1012	0/1:21,1:21:21.13:21,0,289	0/1:22,0:21:4.82:5,0,230	0/0:2,0:2:3.01:0,3,37
chr10	101375940	.	CAT	C	111.12	PASS	AB=0.933;AC=7;AF=0.125;AN=56;BaseQRankSum=4.660;DP=835;FS=60.722;HRun=0;HaplotypeScore=257.2515;InbreedingCoeff=0.2051;MQ=44.29;MQ0=34;MQRankSum=-3.381;QD=0.65;ReadPosRankSum=-3.291;VQSLOD=0.1220;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:0.39:0,0,0	1/1:10,0:10:5.59:22,6,0	0/0:76,0:16:38.69:0,39,315	0/0:78,0:20:45.64:0,46,409	0/0:19,0:18:30.26:0,30,431	0/0:20,0:20:53.91:0,54,492	0/0:22,0:22:55.23:0,55,679	0/0:34,0:31:21.72:0,22,467	0/0:36,1:37:5.52:0,6,47	0/0:27,0:27:78.89:0,79,878	0/0:11,0:11:33.01:0,33,371	0/0:35,1:35:24.43:0,24,119	0/0:37,2:40:12.76:0,13,156	0/1:16,14:30:43.78:129,0,44	0/0:25,0:25:6.12:0,6,139	0/0:30,0:30:12.87:0,13,44	0/0:35,1:36:71.70:0,72,1154	0/1:15,0:14:2.92:3,0,211	0/0:19,0:17:37.62:0,38,281	0/0:10,0:10:2.48:0,2,7	0/1:61,1:61:40.52:41,0,109	0/0:20,0:20:18.82:0,19,446	0/0:19,0:19:22.37:0,22,514	0/0:48,1:49:91.50:0,91,1348	0/0:27,1:27:63.67:0,64,834	0/1:26,0:25:30.62:31,0,370	0/0:23,0:22:17.59:0,18,374	0/0:3,0:3:5.94:0,6,76
chr10	101375942	.	TACACACAC	T	1009.37	PASS	AB=0.803;AC=6;AF=0.111;AN=54;BaseQRankSum=8.473;DP=853;FS=32.712;HRun=0;HaplotypeScore=311.2819;InbreedingCoeff=0.1040;MQ=42.52;MQ0=35;MQRankSum=-8.686;QD=5.49;ReadPosRankSum=1.101;VQSLOD=1.3998;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,2:29:0:0,0,1	0/1:7,0:10:9.48:9,0,19	./.	0/0:78,0:18:6.02:0,6,118	0/0:16,0:18:24.08:0,24,752	0/0:20,0:20:24.07:0,24,645	0/0:23,0:24:33.11:0,33,1121	0/0:36,0:33:24.97:0,25,573	0/1:27,8:37:15.60:393,0,16	0/0:29,0:29:57.20:0,57,1820	0/0:11,0:11:18.06:0,18,668	0/1:23,12:37:43.39:43,0,170	0/1:32,8:40:96.52:329,0,97	0/0:32,0:32:20.81:0,21,369	0/0:18,0:26:21.19:0,21,545	0/1:20,10:30:3.76:347,0,4	0/0:37,0:37:78.27:0,78,2592	0/0:12,0:14:26.94:0,27,651	0/0:20,0:19:29.30:0,29,642	0/0:9,0:11:1.82:0,2,5	0/0:60,0:65:15.68:0,16,381	0/0:15,0:18:27.09:0,27,880	0/0:15,0:18:35.30:0,35,1105	0/0:48,0:49:74.90:0,75,2612	0/0:28,0:27:57.20:0,57,2064	0/0:22,0:25:36.10:0,36,902	0/0:24,0:23:36.05:0,36,972	0/0:7,0:7:16.61:0,17,355
chr10	101375945	.	A	AG	1253.04	PASS	AB=0.807;AC=5;AF=0.089;AN=56;BaseQRankSum=10.244;DP=881;FS=12.161;HRun=0;HaplotypeScore=262.9080;InbreedingCoeff=0.2949;MQ=42.83;MQ0=33;MQRankSum=-8.663;QD=8.52;ReadPosRankSum=4.928;VQSLOD=2.3097;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,2:29:0.81:0,1,3	0/0:11,0:11:4.44:0,4,21	0/0:73,0:13:30.08:0,30,379	0/0:77,0:17:47.90:0,48,633	0/0:19,0:18:50.98:0,51,607	0/0:18,0:18:51.17:0,51,706	0/0:28,0:28:75.18:0,75,1009	0/0:37,0:34:78.07:0,78,905	0/1:28,9:37:29.22:404,0,29	0/0:31,0:31:88.14:0,88,1161	0/0:12,0:12:36.11:0,36,483	0/1:28,11:38:34.57:299,0,35	0/1:33,8:41:99:311,0,184	0/0:35,1:37:8.40:0,8,193	0/0:28,0:28:21.83:0,22,226	1/1:21,9:30:17.99:359,18,0	0/0:36,0:36:99:0,105,1436	0/0:16,0:15:34.94:0,35,409	0/0:21,0:19:47.54:0,48,555	0/0:13,0:13:4.55:0,5,29	0/0:69,0:68:22.84:0,23,187	0/0:20,0:20:48.02:0,48,619	0/0:18,0:18:50.87:0,51,619	0/0:49,0:49:99:0,114,1561	0/0:30,0:29:78.64:0,79,1028	0/0:27,1:27:43.83:0,44,475	0/0:25,0:25:41.74:0,42,494	0/0:8,0:8:15.94:0,16,206
chr10	101375951	.	A	AG	1481.02	PASS	AB=0.840;AC=10;AF=0.179;AN=56;BaseQRankSum=13.278;DP=859;FS=0.000;HRun=0;HaplotypeScore=245.4456;InbreedingCoeff=-0.1970;MQ=41.63;MQ0=34;MQRankSum=-10.743;QD=4.81;ReadPosRankSum=2.624;VQSLOD=3.2380;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:1.38:0,1,4	0/0:12,0:12:12.18:0,12,97	0/0:67,0:10:27.05:0,27,347	0/0:70,0:15:36.12:0,36,493	0/0:15,0:14:38.98:0,39,473	0/0:16,0:16:45.15:0,45,624	0/0:26,0:26:75.15:0,75,997	0/1:28,7:33:99:263,0,719	0/1:29,8:37:34.15:112,0,34	0/0:30,0:30:85.83:0,86,1165	0/0:12,0:12:36.12:0,36,500	0/1:35,6:40:35.70:112,0,36	0/1:26,13:39:98.58:320,0,99	0/1:30,8:38:99:143,0,345	0/0:23,5:28:35.57:0,36,391	0/1:21,5:27:63.67:72,0,64	0/0:37,0:37:99:0,105,1439	0/1:14,2:15:52.99:53,0,400	0/1:23,0:21:84.50:85,0,479	0/0:10,5:15:10.56:0,11,112	0/0:52,13:63:23.93:0,24,248	0/0:21,0:21:54.03:0,54,683	0/0:18,0:18:50.89:0,51,637	0/0:50,0:50:99:0,117,1582	0/0:30,0:29:75.17:0,75,1004	0/1:21,9:30:99:351,0,498	0/1:17,5:21:99:114,0,407	0/0:10,0:8:18.95:0,19,250
chr10	101376088	.	CT	C	313.08	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.142;DP=782;FS=3.965;HRun=3;HaplotypeScore=101.8897;InbreedingCoeff=0.9995;MQ=81.24;MQ0=0;MQRankSum=1.169;QD=24.08;ReadPosRankSum=0.386;VQSLOD=2.9004;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:52:99:0,150,2063	1/1:1,12:13:33.10:408,33,0	0/0:23,0:22:60.09:0,60,759	0/0:25,0:25:52.40:0,52,802	0/0:26,0:26:78.23:0,78,1063	0/0:26,0:26:75.20:0,75,993	0/0:27,0:27:81.22:0,81,1091	0/0:23,0:23:69.18:0,69,920	0/0:36,0:36:99:0,105,1479	0/0:43,0:43:99:0,129,1771	0/0:32,0:32:93.30:0,93,1316	0/0:35,0:35:99:0,105,1463	0/0:24,0:24:72.16:0,72,973	0/0:31,0:31:93.30:0,93,1317	0/0:25,0:25:75.21:0,75,1006	0/0:28,0:28:84.27:0,84,1172	0/0:31,0:31:90.27:0,90,1254	0/0:21,0:21:60.20:0,60,862	0/0:20,0:19:54.13:0,54,700	0/0:18,0:18:54.18:0,54,777	0/0:36,0:36:99:0,105,1412	0/0:35,0:35:99:0,102,1443	0/0:27,0:27:81.23:0,81,1139	0/0:39,0:39:99:0,114,1578	0/0:27,0:27:81.23:0,81,1108	0/0:20,0:20:60.20:0,60,862	0/0:26,0:25:72.24:0,72,1025	0/0:11,0:12:33.11:0,33,472
chr10	101377253	.	CTT	C	3136.90	PASS	AB=0.579;AC=19;AF=0.339;AN=56;BaseQRankSum=4.022;DP=597;FS=4.298;HRun=12;HaplotypeScore=77.3340;InbreedingCoeff=0.8945;MQ=68.49;MQ0=12;MQRankSum=-0.162;QD=16.87;ReadPosRankSum=3.026;VQSLOD=2.9633;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:33:45.65:0,46,203	0/1:3,1:11:4.28:4,0,104	0/0:46,0:19:21.19:0,21,150	0/0:52,0:23:19.27:0,19,243	0/0:19,0:20:47.51:0,48,652	0/0:16,0:17:48.16:0,48,699	0/0:12,0:12:31.64:0,32,431	1/1:13,16:28:25.08:436,25,0	0/0:10,0:10:27.09:0,27,396	0/0:23,0:24:53.66:0,54,739	0/0:23,0:23:48.15:0,48,698	0/0:23,0:23:48.15:0,48,687	0/0:16,0:16:36.12:0,36,527	0/0:2,1:14:0.33:0,0,102	1/1:5,14:19:39.08:396,39,0	0/0:13,0:14:27.08:0,27,365	0/0:33,0:33:48.19:0,48,1023	1/1:3,18:20:42.09:427,42,0	1/1:2,8:10:23.62:237,24,0	1/1:4,15:19:38.86:378,39,0	1/1:4,6:10:15.02:153,15,0	0/0:12,0:13:29.22:0,29,411	0/0:17,0:17:45.15:0,45,660	0/0:14,0:12:21.02:0,21,287	0/0:25,0:26:53.66:0,54,751	1/1:7,18:24:56.57:541,57,0	1/1:4,20:24:51.09:518,51,0	1/1:5,13:18:12.91:257,13,0
chr10	101377821	.	ATGGGGCTTGAATTAC	A	25523.83	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=18.230;DP=610;FS=6.888;HRun=0;HaplotypeScore=282.0630;InbreedingCoeff=0.9712;MQ=83.51;MQ0=0;MQRankSum=-17.879;QD=92.81;ReadPosRankSum=4.706;VQSLOD=3.3075;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:23:45.15:1927,45,0	1/1:0,5:5:15.05:675,15,0	0/0:28,0:28:80.72:0,81,3877	0/0:18,0:18:48.16:0,48,2385	0/0:31,0:31:87.28:0,87,5835	0/0:34,0:33:93.32:0,93,6885	0/0:30,0:30:90.31:0,90,6547	1/1:7,14:21:45.13:1626,45,0	1/1:4,11:15:30.10:1349,30,0	0/0:24,0:24:72.24:0,72,5013	0/0:21,0:21:63.22:0,63,4478	1/1:4,14:18:42.14:1889,42,0	1/1:5,26:31:72.25:3238,72,0	0/0:32,0:32:96.33:0,96,6694	1/1:3,19:22:48.16:2159,48,0	1/1:5,24:30:69.24:3102,69,0	0/0:20,0:20:54.16:0,54,3443	1/1:1,7:8:12.04:540,12,0	1/1:4,10:14:30.10:1350,30,0	1/1:3,17:20:51.18:2294,51,0	1/1:10,3:13:6.02:269,6,0	0/0:26,0:26:78.21:0,78,4838	0/0:24,0:24:72.25:0,72,5084	0/0:27,0:27:75.26:0,75,5251	0/0:20,0:19:57.20:0,57,3838	1/1:4,14:18:45.12:1871,45,0	1/1:10,21:31:63.22:2829,63,0	1/1:0,6:6:9.03:405,9,0
chr10	101378363	.	C	CTACCAGAGTCTTTGTAAATA	44938.43	PASS	AB=0.833;AC=17;AF=0.304;AN=56;BaseQRankSum=6.462;DP=753;FS=8.406;HRun=0;HaplotypeScore=421.8078;InbreedingCoeff=0.9144;MQ=70.55;MQ0=1;MQRankSum=-20.057;QD=186.47;ReadPosRankSum=-3.160;VQSLOD=3.7589;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,150,7076	0/0:9,0:9:27.09:0,27,1428	0/0:17,0:17:44.89:0,45,2129	0/0:14,0:14:26.09:0,26,1787	0/0:32,0:32:96.32:0,96,4865	0/0:28,0:28:84.29:0,84,4476	0/0:34,0:34:96.33:0,96,4841	1/1:44,0:44:99:6434,120,0	0/0:26,0:26:75.26:0,75,3976	0/0:24,0:24:72.25:0,72,3889	0/0:21,0:21:63.22:0,63,3525	0/0:25,0:25:75.26:0,75,4194	0/0:28,0:28:81.28:0,81,4193	0/0:23,0:23:69.24:0,69,3511	1/1:26,9:35:99:7558,102,0	0/0:33,0:33:99:0,99,5287	0/0:27,0:27:80.49:0,80,3931	1/1:8,3:12:33.11:2696,33,0	1/1:16,0:16:45.10:1999,45,0	1/1:36,5:41:99:8750,111,0	1/1:11,0:11:21.06:1325,21,0	0/0:35,0:35:99:0,105,5436	0/0:37,0:37:99:0,111,5890	0/0:17,0:16:45.15:0,45,2430	0/0:29,0:29:84.29:0,84,4409	0/1:28,5:35:75.44:6189,0,75	1/1:18,9:27:69.24:5793,69,0	1/1:15,3:20:54.19:4196,54,0
chr10	101379400	.	AC	A	575.30	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.172;DP=658;FS=4.800;HRun=1;HaplotypeScore=79.6038;InbreedingCoeff=0.9963;MQ=75.89;MQ0=0;MQRankSum=-2.879;QD=30.28;ReadPosRankSum=1.042;VQSLOD=3.3086;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.22:0,69,963	0/0:8,0:8:24.08:0,24,343	0/0:16,0:16:48.07:0,48,599	0/0:11,0:11:26.31:0,26,375	0/0:46,0:46:99:0,138,1889	0/0:25,0:25:75.24:0,75,1053	0/0:12,0:12:36.09:0,36,478	0/0:30,0:30:90.24:0,90,1185	0/0:14,0:14:42.12:0,42,579	0/0:33,0:33:99:0,99,1378	0/0:27,0:27:81.24:0,81,1113	0/0:29,0:29:87.28:0,87,1225	0/0:25,0:25:71.94:0,72,931	1/1:0,19:19:48.16:670,48,0	0/0:25,0:25:75.22:0,75,1035	0/0:23,0:23:69.19:0,69,932	0/0:24,0:24:69.19:0,69,948	0/0:11,0:11:33.04:0,33,427	0/0:22,0:22:66.19:0,66,881	0/0:41,0:41:99:0,123,1653	0/0:23,0:23:66.22:0,66,930	0/0:17,0:17:51.16:0,51,711	0/0:25,0:25:74.45:0,74,1016	0/0:20,0:20:57.08:0,57,749	0/0:26,0:26:78.23:0,78,1075	0/0:27,0:27:81.27:0,81,1159	0/0:34,0:33:99:0,102,1393	0/0:22,0:22:66.06:0,66,872
chr10	101380701	.	TTATTATTATTATTATTATTAG	T	5824.27	PASS	AB=1.000;AC=32;AF=0.615;AN=52;BaseQRankSum=8.612;DP=170;FS=2.303;HRun=0;HaplotypeScore=114.5855;InbreedingCoeff=0.6705;MQ=46.92;MQ0=2;MQRankSum=-8.972;QD=48.13;ReadPosRankSum=-1.634;VQSLOD=3.4795;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:12.04:216,12,0	1/1:2,0:2:6.02:216,6,0	./.	0/1:5,0:3:15.52:16,0,40	0/0:8,0:8:21.06:0,21,1643	0/0:4,0:4:12.04:0,12,811	./.	1/1:22,0:21:53.75:540,54,0	1/1:8,0:8:21:308,21,0	0/0:2,0:2:6.02:0,6,396	0/0:1,0:1:3:0,3,25	1/1:6,0:6:14.97:230,15,0	1/1:6,0:6:14.92:170,15,0	0/1:3,0:3:17.26:17,0,40	1/1:3,1:4:11.97:412,12,0	1/1:6,0:6:18.06:315,18,0	0/0:21,0:21:60.14:0,60,3747	1/1:10,0:10:11.97:241,12,0	1/1:8,1:9:26.99:633,27,0	1/1:6,1:7:18.03:501,18,0	1/1:3,0:3:8.39:185,8,0	0/0:1,0:1:3.01:0,3,75	0/0:1,0:1:3.01:0,3,141	0/0:3,0:3:9.03:0,9,475	0/0:7,0:7:14.40:0,14,860	1/1:8,0:8:23.93:452,24,0	1/1:9,1:10:29.93:746,30,0	1/1:5,2:6:18.06:627,18,0
chr10	101380722	.	GTA	G	47.72	PASS	AB=0.824;AC=10;AF=0.208;AN=48;BaseQRankSum=6.687;DP=188;FS=8.656;HRun=0;HaplotypeScore=60.2517;InbreedingCoeff=0.1141;MQ=47.62;MQ0=5;MQRankSum=-4.734;QD=0.82;ReadPosRankSum=2.117;VQSLOD=0.3442;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:11.94:0,12,90	1/1:0,2:2:3.46:24,3,0	0/0:13,0:5:15.05:0,15,288	0/0:10,0:6:18.04:0,18,283	0/0:12,0:12:33.11:0,33,632	0/0:5,0:5:15.05:0,15,286	0/0:5,0:5:15.05:0,15,255	0/0:26,0:26:71.91:0,72,488	./.	0/0:5,0:5:15.05:0,15,254	0/0:3,0:3:9.03:0,9,172	./.	./.	0/0:3,0:3:4.30:0,4,30	0/1:6,1:7:11.19:11,0,48	./.	0/0:23,0:23:69.19:0,69,1281	0/1:10,1:11:10.56:11,0,27	0/1:9,1:10:13.43:13,0,118	0/1:2,2:4:7.69:31,0,8	0/0:1,0:1:2.98:0,3,22	0/0:3,0:2:6.02:0,6,115	0/0:4,0:4:12.04:0,12,217	0/0:6,0:6:18.06:0,18,343	0/0:7,0:7:18.06:0,18,332	0/1:5,2:7:17.98:18,0,43	0/1:9,3:12:29.57:30,0,104	1/1:4,1:4:6.39:43,6,0
chr10	101380731	.	TTGTTGC	T	1905.62	PASS	AB=1.000;AC=22;AF=0.458;AN=48;BaseQRankSum=10.328;DP=219;FS=50.450;HRun=0;HaplotypeScore=76.9637;InbreedingCoeff=0.7422;MQ=46.90;MQ0=8;MQRankSum=-7.595;QD=15.49;ReadPosRankSum=0.701;VQSLOD=0.8422;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:4:11.80:75,12,0	0/0:2,0:2:2.22:0,2,7	0/0:13,0:5:15.05:0,15,385	0/1:10,0:6:14.49:14,0,181	0/0:14,0:14:30.88:0,31,590	0/0:6,0:5:15.05:0,15,419	0/0:6,0:6:18.06:0,18,579	1/1:33,0:33:85.43:561,85,0	./.	0/0:5,0:5:15.05:0,15,411	0/0:4,0:4:12.04:0,12,277	./.	./.	1/1:4,0:4:11.96:125,12,0	1/1:8,1:9:19.15:204,19,0	./.	0/0:23,0:23:69.10:0,69,1665	0/1:14,0:14:6:88,0,6	1/1:12,1:13:25.33:312,25,0	1/1:5,0:5:8.92:63,9,0	1/1:4,0:3:5.97:68,6,0	0/0:5,0:4:11.78:0,12,160	0/0:5,0:5:14.85:0,15,212	0/0:6,0:6:15.05:0,15,524	0/0:7,0:7:18.05:0,18,434	1/1:9,0:8:14.92:145,15,0	1/1:9,4:13:24.04:396,24,0	1/1:4,0:4:6.41:42,6,0
chr10	101380734	.	TTGC	T	2002.38	PASS	AB=1.000;AC=24;AF=0.500;AN=48;BaseQRankSum=10.864;DP=226;FS=44.597;HRun=0;HaplotypeScore=61.4019;InbreedingCoeff=0.7369;MQ=46.77;MQ0=11;MQRankSum=-7.880;QD=15.40;ReadPosRankSum=0.610;VQSLOD=1.1984;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:4:11.80:75,12,0	0/0:2,0:2:2.22:0,2,7	0/0:13,0:5:15.05:0,15,258	0/1:10,0:6:19.66:20,0,122	0/0:13,0:13:24.67:0,25,362	0/0:6,0:5:15.05:0,15,265	0/0:8,0:8:24.04:0,24,414	1/1:1,33:33:98.22:709,98,0	./.	0/0:6,0:5:15.05:0,15,273	0/0:4,0:4:12.04:0,12,184	./.	./.	1/1:3,1:4:12.03:157,12,0	1/1:9,2:11:26.75:217,27,0	./.	0/0:24,0:24:71.97:0,72,1143	1/1:2,13:15:9.88:102,10,0	1/1:3,9:12:27.44:282,27,0	1/1:0,3:3:8.94:78,9,0	1/1:5,0:3:5.97:55,6,0	0/0:7,0:6:14.41:0,14,97	0/1:6,0:6:7.15:7,0,126	0/0:6,0:6:18.03:0,18,365	0/0:7,0:7:18.05:0,18,302	1/1:2,6:7:14.95:147,15,0	1/1:7,6:13:24.08:303,24,0	1/1:2,2:4:5.94:41,6,0
chr10	101381130	.	AGATCTTGTGCGCT	A	19312.26	PASS	AB=0.593;AC=29;AF=0.518;AN=56;BaseQRankSum=17.145;DP=567;FS=0.349;HRun=0;HaplotypeScore=219.8180;InbreedingCoeff=0.9043;MQ=92.96;MQ0=0;MQRankSum=-16.880;QD=79.47;ReadPosRankSum=2.891;VQSLOD=4.6433;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,26:31:60.20:2063,60,0	1/1:0,2:2:6.02:245,6,0	0/0:31,0:31:84.28:0,84,4794	0/0:27,0:27:66.23:0,66,3579	0/0:31,0:31:90.31:0,90,5519	0/0:15,0:15:45.15:0,45,2920	0/0:25,0:25:75.24:0,75,4371	1/1:11,16:27:48.15:1786,48,0	1/1:2,19:21:48.16:1924,48,0	0/0:33,0:33:96.33:0,96,6363	0/0:20,0:20:60.21:0,60,3637	1/1:1,17:18:42.14:1633,42,0	1/1:1,19:20:48.16:1963,48,0	0/0:34,0:34:99:0,99,6101	1/1:3,13:16:30.10:1226,30,0	1/1:1,21:22:50.96:2085,51,0	0/0:23,0:23:69.24:0,69,4557	1/1:3,13:16:30.10:1227,30,0	1/1:1,12:13:36.11:1081,36,0	1/1:0,7:7:21.07:859,21,0	1/1:5,15:20:26.30:808,26,0	0/0:21,0:21:63.22:0,63,3979	0/0:18,0:18:54.19:0,54,3492	0/0:30,0:30:90.31:0,90,5835	0/0:16,0:16:48.16:0,48,2820	0/1:5,11:16:99:1308,0,561	1/1:1,7:7:18.06:736,18,0	1/1:2,4:6:9.03:368,9,0
chr10	101381949	.	C	CA	1239.17	PASS	AB=0.960;AC=7;AF=0.125;AN=56;BaseQRankSum=7.449;DP=611;FS=0.548;HRun=10;HaplotypeScore=80.3185;InbreedingCoeff=0.8407;MQ=78.46;MQ0=0;MQRankSum=-2.894;QD=12.15;ReadPosRankSum=2.337;VQSLOD=3.4693;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,27:36:42.77:650,43,0	0/0:15,0:16:40.97:0,41,326	0/0:22,0:22:21.12:0,21,173	0/0:18,0:16:19.74:0,20,133	0/0:27,0:27:46.87:0,47,368	0/0:17,0:17:26.92:0,27,222	0/0:14,0:17:39.07:0,39,289	0/0:34,1:35:60.80:0,61,688	1/1:4,12:16:18.05:192,18,0	0/0:22,0:23:49.36:0,49,377	0/0:21,0:21:44.51:0,45,368	0/0:24,1:27:28.94:0,29,416	0/0:15,0:16:43.96:0,44,348	0/1:22,1:24:10.02:10,0,276	0/0:19,0:20:43.95:0,44,349	1/1:7,18:26:32.33:533,32,0	0/0:29,0:29:86.85:0,87,706	0/0:15,0:15:35.94:0,36,295	0/0:15,0:15:32.94:0,33,270	0/0:18,0:18:41.91:0,42,345	0/0:20,0:20:50.90:0,51,411	0/0:18,0:19:43.31:0,43,334	0/0:29,0:29:53.84:0,54,436	0/0:21,0:23:51.95:0,52,402	0/0:17,0:18:43.95:0,44,351	0/0:25,0:27:69.99:0,70,553	0/0:27,0:28:58.91:0,59,473	0/0:5,0:7:17:0,17,125
chr10	101383378	.	CTTTTCT	C	722.39	PASS	AB=1.000;AC=11;AF=0.229;AN=48;BaseQRankSum=2.248;DP=474;FS=1.535;HRun=0;HaplotypeScore=116.0544;InbreedingCoeff=0.3906;MQ=65.21;MQ0=8;MQRankSum=-0.687;QD=6.51;ReadPosRankSum=-0.204;VQSLOD=1.7443;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:23.33:0,23,827	0/1:12,0:12:12.68:13,0,210	0/0:16,0:14:19.57:0,20,402	0/0:13,0:10:9.66:0,10,304	0/0:26,0:26:69.02:0,69,1192	0/0:19,0:19:51.14:0,51,1371	0/0:11,0:10:21.04:0,21,420	0/1:8,0:6:0:0,0,0	0/1:13,0:13:33.52:34,0,311	0/0:26,0:26:65.14:0,65,1100	0/0:24,0:24:54.50:0,54,1121	0/0:21,0:20:47.74:0,48,731	0/0:17,0:18:48.40:0,48,659	1/1:6,7:14:39.12:706,39,0	0/0:12,0:12:0.89:0,1,2	0/1:20,0:20:63.09:63,0,404	0/0:30,0:28:72.03:0,72,1506	./.	1/1:10,0:10:2.80:13,3,0	./.	./.	0/0:17,0:17:51.09:0,51,1140	0/0:25,0:25:69.08:0,69,1632	0/0:15,0:15:13.48:0,13,568	0/0:30,0:29:63.45:0,63,1404	0/1:12,0:12:6.70:17,0,7	1/1:21,0:21:2.74:12,3,0	./.
chr10	101383381	.	TTC	T	1538.66	PASS	AB=1.000;AC=21;AF=0.457;AN=46;BaseQRankSum=4.490;DP=390;FS=38.155;HRun=0;HaplotypeScore=82.8433;InbreedingCoeff=0.6237;MQ=68.29;MQ0=9;MQRankSum=-5.901;QD=10.06;ReadPosRankSum=-6.388;VQSLOD=0.6855;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,3:28:19.18:300,19,0	1/1:12,0:12:6.90:152,7,0	0/0:16,0:13:11.64:0,12,190	0/1:13,0:10:5.08:5,0,120	0/0:27,0:27:48.75:0,49,595	0/0:18,0:17:49.88:0,50,605	0/0:11,0:10:19.31:0,19,202	./.	1/1:14,2:16:38.12:328,38,0	0/0:24,0:24:19.94:0,20,513	0/0:23,0:23:42.46:0,42,463	0/1:20,0:19:18.95:69,0,19	0/1:18,0:18:16.02:103,0,16	1/1:16,0:15:41.38:410,41,0	1/1:1,0:1:0.89:2,1,0	1/1:21,0:21:28.45:271,28,0	0/0:29,0:27:64.82:0,65,606	./.	1/1:2,0:2:2.94:18,3,0	./.	./.	0/0:17,0:17:46.42:0,46,491	0/0:26,0:26:48.69:0,49,724	0/0:13,1:14:14.61:0,15,214	0/0:29,0:28:60.83:0,61,658	1/1:3,0:3:7.09:37,7,0	1/1:1,0:1:2.90:16,3,0	./.
chr10	101383382	.	TC	T	2210.87	PASS	AB=0.958;AC=23;AF=0.500;AN=46;BaseQRankSum=5.600;DP=388;FS=48.491;HRun=1;HaplotypeScore=70.9134;InbreedingCoeff=0.7949;MQ=66.97;MQ0=11;MQRankSum=-7.435;QD=13.65;ReadPosRankSum=-4.244;VQSLOD=-0.3190;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,4:27:66.04:476,66,0	1/1:10,2:12:31.54:228,32,0	0/0:15,0:12:12.05:0,12,182	0/0:13,0:10:2.10:0,2,115	0/0:27,0:27:46.65:0,47,484	0/0:18,0:17:49.18:0,49,461	0/0:11,0:10:22.30:0,22,179	./.	1/1:15,1:16:45.09:364,45,0	0/1:22,1:23:4.08:4,0,400	0/0:22,0:22:39.60:0,40,346	1/1:19,1:19:43.97:292,44,0	1/1:15,3:18:40.07:226,40,0	1/1:16,1:15:40.89:341,41,0	1/1:1,0:1:0.89:2,1,0	1/1:21,0:21:54.97:388,55,0	0/0:28,1:27:29.18:0,29,422	./.	1/1:1,0:1:2.94:18,3,0	./.	./.	0/0:17,0:17:25.33:0,25,358	0/0:26,0:26:44.31:0,44,574	0/0:14,0:14:17.14:0,17,151	0/0:29,0:28:51.07:0,51,499	1/1:0,3:3:7.40:37,7,0	1/1:1,0:1:2.90:16,3,0	./.
chr10	101384320	.	TA	T	438.03	PASS	AB=0.985;AC=24;AF=0.444;AN=54;BaseQRankSum=15.436;DP=568;FS=7.449;HRun=11;HaplotypeScore=132.9782;InbreedingCoeff=0.3993;MQ=72.69;MQ0=3;MQRankSum=-11.251;QD=1.28;ReadPosRankSum=3.033;VQSLOD=-0.4052;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:1.06:29,0,1	1/1:6,0:6:5.18:14,5,0	0/1:26,3:23:39.35:39,0,209	0/1:27,0:23:1.98:2,0,166	0/0:32,0:33:66.55:0,67,706	0/0:17,0:17:39.10:0,39,416	0/0:18,2:21:7.69:0,8,477	1/1:28,0:27:16.94:72,17,0	1/1:24,0:24:25.42:65,25,0	0/0:22,1:23:26.46:0,26,460	0/0:23,0:24:53.99:0,54,547	1/1:21,0:21:16.68:43,17,0	1/1:26,0:26:7.63:51,8,0	1/1:19,0:19:21.15:55,21,0	1/1:18,0:18:23.83:67,24,0	1/1:20,0:20:17.29:46,17,0	0/0:35,1:37:68.42:0,68,907	0/1:20,0:20:13.82:14,0,33	0/1:19,0:19:10.51:26,0,11	0/1:27,0:27:4.56:41,0,5	0/0:5,0:5:0:0,0,0	0/0:10,0:10:27.06:0,27,281	0/0:14,2:16:2.89:0,3,233	0/0:21,0:23:56.89:0,57,591	0/0:16,1:17:14.53:0,15,359	0/1:15,0:15:24.09:28,0,24	0/1:22,0:22:21.92:29,0,22	./.
chr10	101384327	.	AAAAAT	A	7668.16	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=14.976;DP=585;FS=1.523;HRun=0;HaplotypeScore=152.5302;InbreedingCoeff=0.8241;MQ=65.93;MQ0=4;MQRankSum=-11.168;QD=25.48;ReadPosRankSum=3.168;VQSLOD=4.8486;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:18:48.03:757,48,0	1/1:1,3:4:11.95:153,12,0	0/0:33,0:20:45.45:0,45,835	0/0:30,0:19:16.02:0,16,676	0/0:30,0:30:81.25:0,81,1977	0/0:16,0:16:48.14:0,48,1169	0/0:23,0:23:63.22:0,63,1568	1/1:37,0:37:89.99:774,90,0	1/1:1,21:22:48.09:829,48,0	0/0:28,0:28:77.91:0,78,1732	0/0:22,0:22:63.20:0,63,1544	1/1:4,19:23:29.83:487,30,0	1/1:3,19:22:51.13:917,51,0	1/1:0,19:19:48.04:787,48,0	1/1:22,0:22:53.77:469,54,0	1/1:1,17:18:32.79:594,33,0	0/0:34,0:34:99:0,99,2510	0/1:24,0:24:99:210,0,103	1/1:19,0:19:39.85:378,40,0	1/1:25,0:25:56.73:494,57,0	1/1:5,0:5:5.80:32,6,0	0/0:11,0:11:30.07:0,30,583	0/0:15,0:15:39.07:0,39,956	0/0:22,0:22:60.15:0,60,1379	0/0:20,0:20:60.18:0,60,1357	0/1:19,0:19:12.83:371,0,13	1/1:22,0:22:42.42:383,42,0	1/1:2,0:2:5.78:31,6,0
chr10	101384328	.	AAAAT	A	8383.34	PASS	AB=0.726;AC=31;AF=0.554;AN=56;BaseQRankSum=16.041;DP=582;FS=1.488;HRun=0;HaplotypeScore=138.3463;InbreedingCoeff=0.7500;MQ=65.97;MQ0=4;MQRankSum=-10.924;QD=25.79;ReadPosRankSum=2.518;VQSLOD=5.0095;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:51.01:506,51,0	1/1:3,1:4:11.99:137,12,0	0/0:33,0:20:45.56:0,46,736	0/1:28,1:18:30.70:31,0,555	0/0:30,0:30:81.21:0,81,1787	0/0:16,0:16:48.15:0,48,1023	0/0:23,0:23:66.13:0,66,1336	1/1:4,32:36:97.18:1226,97,0	1/1:22,0:22:48.06:504,48,0	0/0:28,0:28:77.88:0,78,1471	0/0:22,0:22:63.20:0,63,1358	1/1:21,2:23:30.08:363,30,0	1/1:20,1:21:51.14:576,51,0	1/1:19,0:19:48.01:486,48,0	1/1:2,19:21:53.91:808,54,0	1/1:18,0:18:32.89:358,33,0	0/0:34,0:34:99:0,99,2205	0/1:11,13:24:69.74:398,0,70	1/1:5,14:19:45.03:679,45,0	1/1:3,21:24:65.78:914,66,0	1/1:1,3:4:5.81:32,6,0	0/0:11,0:11:33.06:0,33,587	0/0:17,0:17:44.56:0,45,850	0/0:23,0:23:63.17:0,63,1310	0/0:20,0:20:60.13:0,60,1126	0/1:4,14:18:21.82:622,0,22	1/1:5,17:22:47.94:711,48,0	1/1:2,0:2:5.78:31,6,0
chr10	101384332	.	T	TA	2756.74	PASS	AB=0.900;AC=18;AF=0.321;AN=56;BaseQRankSum=12.661;DP=560;FS=3.840;HRun=11;HaplotypeScore=125.9169;InbreedingCoeff=0.7748;MQ=65.75;MQ0=4;MQRankSum=-10.230;QD=16.51;ReadPosRankSum=-3.069;VQSLOD=2.3342;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:0.70:0,1,41	0/1:4,0:4:8.79:11,0,9	0/0:31,0:18:42.11:0,42,463	0/0:27,0:16:12.79:0,13,279	0/0:28,0:28:78.10:0,78,834	0/0:16,0:16:45.13:0,45,509	0/0:21,0:21:63.11:0,63,696	1/1:33,3:36:96.54:793,97,0	0/0:21,0:21:27.96:0,28,83	0/0:26,0:26:75.13:0,75,828	0/0:21,0:21:60.10:0,60,656	0/0:21,0:21:20.56:0,21,62	0/0:21,0:21:34.96:0,35,104	0/0:19,0:19:26.52:0,27,81	1/1:19,2:21:51.54:318,52,0	0/0:18,0:18:21.29:0,21,67	0/0:33,0:33:96.15:0,96,1048	0/1:15,5:20:23.29:285,0,23	1/1:16,4:20:48.05:351,48,0	1/1:22,1:23:57.38:386,57,0	1/1:3,0:3:6.02:67,6,0	0/0:12,0:12:27.04:0,27,282	0/0:16,0:16:45.13:0,45,503	0/0:21,0:21:50.60:0,51,524	0/0:20,0:20:60.10:0,60,662	1/1:15,3:18:18.77:340,19,0	1/1:17,3:20:48.54:326,49,0	1/1:2,0:2:6.02:80,6,0
chr10	101384532	.	AG	A	6426.14	PASS	AB=0.909;AC=19;AF=0.339;AN=56;BaseQRankSum=13.471;DP=528;FS=19.701;HRun=4;HaplotypeScore=52.0440;InbreedingCoeff=0.9188;MQ=80.41;MQ0=0;MQRankSum=-4.379;QD=29.89;ReadPosRankSum=0.715;VQSLOD=2.9388;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.19:0,57,798	0/0:6,0:6:18.06:0,18,252	0/0:18,0:18:51.17:0,51,693	0/0:10,0:10:30.03:0,30,380	0/0:40,0:40:99:0,120,1662	0/0:22,0:22:66.21:0,66,906	0/0:11,0:11:30.10:0,30,420	1/1:0,27:27:81.22:947,81,0	0/0:18,0:18:51.17:0,51,706	0/0:19,0:19:57.18:0,57,783	0/0:22,0:22:66.22:0,66,911	0/0:21,0:21:60.20:0,60,837	0/0:28,0:28:72.22:0,72,983	0/0:16,0:16:48.16:0,48,664	1/1:3,19:22:60.18:719,60,0	0/0:15,0:15:45.15:0,45,630	0/1:18,2:19:11.82:12,0,679	1/1:0,13:13:36.11:432,36,0	1/1:3,12:15:36.07:406,36,0	1/1:3,31:34:93.29:1115,93,0	1/1:1,12:13:36.11:432,36,0	0/0:5,0:5:12.04:0,12,167	0/0:11,0:11:33.10:0,33,445	0/0:8,0:8:24.08:0,24,336	0/0:24,0:24:72.22:0,72,976	1/1:3,22:25:66.20:792,66,0	1/1:3,30:33:93.27:1103,93,0	1/1:0,13:13:39.12:468,39,0
chr10	101384613	.	AT	A	6378.88	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=16.670;DP=487;FS=5.999;HRun=2;HaplotypeScore=65.6207;InbreedingCoeff=0.9669;MQ=76.58;MQ0=0;MQRankSum=-2.582;QD=36.04;ReadPosRankSum=-0.651;VQSLOD=5.0309;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:42.14:0,42,629	0/0:5,0:5:15.03:0,15,204	0/0:6,0:6:8.19:0,8,143	0/0:15,0:15:29.29:0,29,460	0/0:33,0:33:99:0,99,1482	0/0:20,0:20:60.20:0,60,897	0/0:11,0:11:33.10:0,33,476	1/1:2,34:36:99:1283,102,0	0/0:17,0:17:51.17:0,51,764	0/0:23,0:23:69.22:0,69,985	0/0:26,0:26:78.24:0,78,1129	0/0:10,0:10:30.10:0,30,449	0/0:25,0:25:75.23:0,75,1068	0/0:9,0:9:27.09:0,27,404	1/1:0,25:25:72.23:934,72,0	0/0:22,0:21:66.22:0,66,989	0/0:19,0:19:19.08:0,19,733	1/1:1,9:10:27.09:350,27,0	1/1:1,17:18:51.16:650,51,0	1/1:1,27:28:81.26:1051,81,0	1/1:0,9:9:27.09:350,27,0	0/0:3,0:3:9.03:0,9,135	0/0:14,0:14:39.13:0,39,584	0/0:3,0:3:9.03:0,9,134	0/0:35,0:35:99:0,105,1553	1/1:0,25:25:69.17:859,69,0	1/1:2,14:16:48.11:591,48,0	1/1:0,10:10:24.08:311,24,0
chr10	101384951	.	G	GATGT	6221.05	PASS	AB=0.728;AC=20;AF=0.400;AN=50;BaseQRankSum=-7.246;DP=541;FS=30.870;HRun=0;HaplotypeScore=126.5113;InbreedingCoeff=0.8008;MQ=56.91;MQ0=2;MQRankSum=0.771;QD=23.30;ReadPosRankSum=-3.539;VQSLOD=2.0980;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:15:11.54:0,12,105	0/0:5,0:5:12.04:0,12,185	./.	./.	0/0:21,0:21:28.63:0,29,396	1/1:8,11:19:18.06:421,18,0	1/1:10,4:14:9.03:179,9,0	1/1:53,0:53:35.81:305,36,0	0/0:15,0:15:27.09:0,27,416	0/0:14,0:14:27.09:0,27,416	0/0:24,0:24:21.07:0,21,322	0/0:11,0:20:21.80:0,22,178	0/0:6,0:22:36.89:0,37,329	0/0:14,0:14:27.05:0,27,351	1/1:9,13:22:30.10:702,30,0	0/0:9,0:21:36.03:0,36,348	0/0:23,0:24:39.13:0,39,578	1/1:5,3:8:9.03:210,9,0	1/1:9,6:14:21.07:462,21,0	1/1:17,9:26:30.10:702,30,0	0/1:16,15:31:59.30:599,0,59	0/0:14,0:14:30.07:0,30,419	0/0:16,0:16:33.10:0,33,487	./.	0/0:17,0:17:42.14:0,42,642	1/1:20,23:44:29:1503,29,0	0/1:13,5:18:19.11:507,0,19	1/1:6,11:17:27.09:631,27,0
chr10	101385037	.	TTATATA	T	4262.58	PASS	AB=0.697;AC=27;AF=0.500;AN=54;BaseQRankSum=8.541;DP=333;FS=0.560;HRun=0;HaplotypeScore=92.6250;InbreedingCoeff=0.6853;MQ=60.69;MQ0=1;MQRankSum=-4.136;QD=19.38;ReadPosRankSum=-1.477;VQSLOD=4.2383;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:2,0:20:1.84:2,0,38	0/0:6,0:6:18.06:0,18,537	0/0:3,0:2:2.60:0,3,10	0/1:9,0:5:0.19:0,0,102	0/0:11,0:11:21.04:0,21,553	0/0:19,0:19:48.15:0,48,1530	0/0:3,0:3:3.01:0,3,102	1/1:5,29:34:87.08:1430,87,0	1/1:3,0:12:2.83:8,3,0	0/0:10,0:10:24.08:0,24,742	0/0:11,0:11:30.09:0,30,881	1/1:5,0:15:3.77:10,4,0	1/1:8,0:14:2.33:8,2,0	0/1:3,0:13:0.77:1,0,37	1/1:3,8:11:20.90:258,21,0	1/1:7,0:11:1.89:5,2,0	0/0:16,0:20:41.52:0,42,1293	1/1:1,5:6:12.04:248,12,0	1/1:5,7:11:20.99:348,21,0	1/1:2,16:18:35.92:554,36,0	1/1:3,2:5:5.93:40,6,0	0/0:6,0:6:15.04:0,15,382	0/0:7,0:7:12.04:0,12,382	0/0:4,0:4:6:0,6,126	0/0:10,0:10:15.05:0,15,485	1/1:12,10:21:45.11:782,45,0	1/1:2,16:18:30.02:569,30,0	./.
chr10	101385350	.	AGT	A	501.79	PASS	AB=0.877;AC=12;AF=0.231;AN=52;BaseQRankSum=5.345;DP=462;FS=1.650;HRun=0;HaplotypeScore=79.2425;InbreedingCoeff=0.2524;MQ=60.37;MQ0=1;MQRankSum=1.789;QD=3.30;ReadPosRankSum=0.341;VQSLOD=1.3515;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:33:15.03:0,15,182	1/1:6,0:9:8.52:42,9,0	./.	0/0:12,0:11:3.01:0,3,32	0/1:17,1:18:12.34:12,0,209	0/1:16,1:17:12.33:12,0,211	0/1:13,2:15:9.34:9,0,230	0/0:29,0:29:17.81:0,18,127	0/0:8,0:19:21.02:0,21,215	0/0:19,0:20:24.05:0,24,300	0/1:13,1:13:12.31:12,0,230	0/1:7,9:17:21.67:190,0,22	1/1:11,10:22:14.85:147,15,0	1/1:4,11:15:21.02:220,21,0	0/0:15,0:15:0:0,0,0	0/0:13,0:26:17.99:0,18,155	0/0:23,0:23:16.32:0,16,583	0/0:6,0:6:5.95:0,6,42	0/0:18,0:18:4.15:0,4,19	0/0:11,0:11:5.97:0,6,46	./.	0/0:9,0:9:15.05:0,15,225	0/0:12,0:11:15.05:0,15,221	0/1:22,2:25:5.84:6,0,545	0/0:16,1:17:5.50:0,5,451	0/0:13,0:12:10.10:0,10,65	0/0:21,0:21:9.40:0,9,65	0/0:8,0:8:11.99:0,12,143
chr10	101386120	.	C	CCAGGAATAATTGCA	2484.24	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.591;DP=629;FS=0.000;HRun=0;HaplotypeScore=232.7861;InbreedingCoeff=0.9916;MQ=82.86;MQ0=0;MQRankSum=-6.086;QD=138.01;ReadPosRankSum=1.566;VQSLOD=3.6662;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,4242	0/0:6,0:6:18.06:0,18,797	0/0:15,0:15:45.15:0,45,1575	0/0:21,0:21:63.21:0,63,2340	0/0:28,0:28:84.29:0,84,3458	0/0:32,0:32:93.31:0,93,3682	0/0:22,0:22:60.21:0,60,2496	0/0:29,0:29:87.28:0,87,3251	0/0:20,0:20:60.21:0,60,2455	0/0:24,0:24:72.25:0,72,3005	0/0:22,0:22:66.23:0,66,2695	0/0:17,0:17:51.16:0,51,2041	0/0:21,0:21:63.22:0,63,2390	1/1:3,9:18:39.13:2579,39,0	0/0:19,0:19:57.16:0,57,2269	0/0:18,0:18:51.17:0,51,1929	0/0:28,0:28:84.29:0,84,3555	0/0:25,0:25:72.20:0,72,2915	0/0:25,0:25:72.25:0,72,3030	0/0:27,0:27:81.26:0,81,3230	0/0:12,0:12:36.04:0,36,1200	0/0:23,0:23:66.21:0,66,2566	0/0:23,0:23:69.24:0,69,2764	0/0:24,0:24:72.23:0,72,2868	0/0:21,0:21:60.21:0,60,2574	0/0:32,0:32:93.31:0,93,3421	0/0:28,0:28:84.29:0,84,3261	0/0:11,0:11:33.09:0,33,1284
chr10	101386933	.	CT	C	5031.91	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=4.550;DP=633;FS=2.840;HRun=8;HaplotypeScore=77.2896;InbreedingCoeff=0.9990;MQ=73.10;MQ0=0;MQRankSum=-1.689;QD=26.35;ReadPosRankSum=1.183;VQSLOD=5.6349;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:36:72.24:0,72,367	0/0:0,0:10:23:0,23,117	0/0:18,0:18:30.60:0,31,409	0/0:17,0:16:39.12:0,39,467	0/0:37,0:37:99:0,102,1196	0/0:17,0:17:42.12:0,42,497	0/0:22,0:22:57.15:0,57,664	1/1:2,22:24:66.10:637,66,0	0/0:7,0:26:48.67:0,49,246	0/0:22,0:22:60.18:0,60,725	0/0:25,0:25:60.18:0,60,725	0/0:3,0:18:29.03:0,29,177	0/0:2,0:16:25.77:0,26,131	0/0:3,0:21:48.96:0,49,259	1/1:2,20:22:60.09:579,60,0	0/0:3,0:17:37.49:0,37,205	0/0:42,0:42:99:0,120,1437	1/1:0,17:17:45.07:435,45,0	1/1:2,24:26:72.07:686,72,0	1/1:1,27:28:78.12:753,78,0	1/1:2,19:21:54.08:522,54,0	0/0:18,0:18:51.16:0,51,616	0/0:18,0:18:51.16:0,51,616	0/0:32,0:32:87.27:0,87,1049	0/0:30,0:30:81.25:0,81,977	1/1:2,22:24:66.11:637,66,0	1/1:1,18:19:54.09:521,54,0	1/1:1,9:10:27.04:261,27,0
chr10	101388844	.	AAC	A	1443.49	PASS	AB=0.969;AC=30;AF=0.556;AN=54;BaseQRankSum=7.976;DP=686;FS=5.306;HRun=0;HaplotypeScore=104.1890;InbreedingCoeff=0.0168;MQ=59.41;MQ0=18;MQRankSum=-0.844;QD=2.85;ReadPosRankSum=1.884;VQSLOD=1.7976;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:44,0:43:0.32:41,0,0	0/0:11,0:11:15:0,15,162	./.	0/0:47,0:21:0:0,0,1	0/0:15,1:16:9.03:0,9,181	1/1:14,7:21:14.41:231,14,0	1/1:29,1:30:14.20:126,14,0	0/0:20,0:20:2.97:0,3,20	0/1:27,0:27:48.80:72,0,49	0/1:27,0:27:11.45:11,0,309	0/1:16,0:17:41.99:42,0,101	1/1:25,0:25:19.08:90,19,0	1/1:23,0:22:13.80:66,14,0	1/1:30,0:30:14.21:79,14,0	1/1:24,0:24:12.71:78,13,0	1/1:21,0:21:14.16:69,14,0	0/0:22,0:22:17.82:0,18,229	0/1:17,0:16:27.88:60,0,28	0/1:11,0:10:15.34:34,0,15	0/1:22,0:22:32.99:44,0,33	0/1:46,0:46:25.12:91,0,25	0/1:23,0:23:0.26:0,0,300	0/0:17,0:17:21:0,21,243	0/1:28,1:31:54.79:55,0,300	0/1:11,11:23:20.36:206,0,20	0/1:22,0:21:24.15:87,0,24	0/1:15,0:15:30.15:71,0,30	1/1:6,0:6:8.84:60,9,0
chr10	101388879	.	ACACACACACC	A	1408.66	PASS	AB=0.995;AC=12;AF=0.214;AN=56;BaseQRankSum=3.118;DP=673;FS=1.056;HRun=0;HaplotypeScore=177.1964;InbreedingCoeff=0.2718;MQ=57.03;MQ0=14;MQRankSum=-2.330;QD=6.12;ReadPosRankSum=-1.039;VQSLOD=2.5208;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:53:17.51:0,18,236	0/0:15,0:15:39.08:0,39,1012	0/0:12,0:9:24.01:0,24,257	0/0:16,0:7:21.03:0,21,244	0/0:19,0:18:45.06:0,45,1254	0/0:17,0:17:48.14:0,48,1314	0/0:21,0:21:55.28:0,55,984	0/1:24,0:24:99:282,0,202	0/1:34,1:35:99:298,0,247	0/0:32,0:32:91.96:0,92,2404	0/0:20,0:20:48.99:0,49,1183	1/1:28,2:30:0.36:344,0,0	1/1:30,1:31:17.62:278,18,0	0/0:28,0:28:27.17:0,27,432	0/0:20,0:20:15.05:0,15,416	1/1:24,0:24:11.70:85,12,0	0/0:21,0:21:54.06:0,54,1332	0/1:21,0:19:92.73:93,0,749	0/1:18,0:16:94.87:95,0,439	0/0:21,0:21:18.06:0,18,553	0/0:47,0:46:39:0,39,980	0/0:25,0:24:65.89:0,66,1846	0/0:14,0:14:30.08:0,30,1099	0/0:31,0:31:75.15:0,75,2238	0/0:23,0:23:54.12:0,54,1228	0/1:25,0:24:78.95:79,0,987	0/1:22,0:22:11.42:11,0,474	0/0:7,0:7:9.03:0,9,196
chr10	101388881	.	ACACACACC	A	2491.68	PASS	AB=0.996;AC=13;AF=0.232;AN=56;BaseQRankSum=2.859;DP=661;FS=6.230;HRun=0;HaplotypeScore=152.1915;InbreedingCoeff=0.2683;MQ=59.26;MQ0=11;MQRankSum=-1.988;QD=8.84;ReadPosRankSum=-0.158;VQSLOD=1.9683;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:50,0:49:26.32:127,0,26	0/0:15,0:15:39.08:0,39,833	0/0:11,0:9:21:0,21,214	0/0:14,0:8:23.96:0,24,241	0/0:20,0:19:48:0,48,1018	0/0:17,0:17:48.12:0,48,954	0/0:19,0:19:54.83:0,55,744	0/1:23,0:23:75.65:352,0,76	0/1:33,1:34:12.21:490,0,12	0/0:32,0:32:91.93:0,92,1895	0/0:21,0:21:51.98:0,52,1001	1/1:3,27:30:29.73:641,30,0	1/1:6,23:29:17.52:423,18,0	0/0:26,0:26:1.33:0,1,164	0/0:20,0:20:15.05:0,15,269	1/1:24,1:25:20.52:235,21,0	0/0:20,0:20:51.04:0,51,1070	0/1:21,0:19:99:116,0,445	0/1:18,0:16:99:122,0,231	0/0:21,0:21:18.06:0,18,410	0/0:46,0:45:15.43:0,15,621	0/0:24,0:23:65.84:0,66,1496	0/0:13,0:13:30.07:0,30,887	0/0:30,0:30:72.13:0,72,1767	0/0:23,0:23:51.03:0,51,913	0/1:28,0:27:99:145,0,617	0/1:24,0:24:11.75:12,0,287	0/0:7,0:7:8.77:0,9,118
chr10	101388883	.	ACACACC	A	3473.61	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=2.557;DP=654;FS=10.173;HRun=0;HaplotypeScore=130.2425;InbreedingCoeff=0.4029;MQ=60.60;MQ0=9;MQRankSum=-1.833;QD=11.21;ReadPosRankSum=-0.598;VQSLOD=2.0821;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,36:44:17.22:275,17,0	0/0:15,0:15:39.06:0,39,635	0/0:10,0:8:21:0,21,214	0/0:14,0:9:26.95:0,27,261	0/0:22,0:21:27.93:0,28,819	0/0:17,0:17:39.99:0,40,618	0/0:19,0:19:5.64:0,6,457	0/1:24,0:24:29.59:402,0,30	1/1:26,5:31:65.10:1072,65,0	0/0:32,0:32:88.84:0,89,1464	0/0:22,0:22:51.97:0,52,781	1/1:30,0:30:29.37:417,29,0	1/1:28,0:28:19.90:296,20,0	0/1:26,0:26:19.72:111,0,20	0/0:21,0:21:15.02:0,15,155	1/1:1,24:25:20.72:382,21,0	0/0:20,0:20:51:0,51,905	0/1:20,0:19:99:125,0,218	0/1:20,0:18:99:172,0,116	0/0:22,0:22:18.02:0,18,240	0/0:42,0:41:26.04:0,26,330	0/0:25,0:24:68.84:0,69,1282	0/0:12,0:12:27.07:0,27,679	0/0:29,0:29:72.12:0,72,1355	0/0:22,0:22:23.79:0,24,591	0/1:30,0:29:99:191,0,343	0/1:24,0:24:26.42:26,0,179	0/1:7,0:7:5.20:5,0,45
chr10	101388885	.	ACACC	A	2990.02	PASS	AB=0.990;AC=20;AF=0.357;AN=56;BaseQRankSum=5.031;DP=640;FS=10.514;HRun=0;HaplotypeScore=110.8696;InbreedingCoeff=0.5996;MQ=63.37;MQ0=8;MQRankSum=-2.063;QD=9.93;ReadPosRankSum=0.123;VQSLOD=2.2432;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:40,1:40:14.61:195,15,0	0/0:15,0:15:36.05:0,36,516	0/0:12,0:10:26.75:0,27,252	0/0:15,0:10:29.78:0,30,254	0/0:22,0:21:44.35:0,44,597	0/0:14,0:14:38.91:0,39,368	0/0:20,0:20:13.28:0,13,309	1/1:26,0:26:41.52:492,42,0	1/1:30,0:30:56.75:598,57,0	0/0:31,0:31:51.82:0,52,1036	0/0:22,0:22:48.84:0,49,577	1/1:30,0:30:29.42:323,29,0	1/1:27,0:27:20.02:232,20,0	1/1:2,21:23:14.69:274,15,0	0/0:21,0:21:3.47:0,3,26	1/1:25,0:25:20.72:237,21,0	0/0:20,0:20:46.32:0,46,712	0/1:19,0:19:25.30:237,0,25	0/1:20,0:18:23.20:222,0,23	0/0:21,0:21:6.49:0,6,85	0/0:41,0:40:6.14:0,6,85	0/0:24,0:23:68.83:0,69,1071	0/0:12,0:12:30.07:0,30,525	0/0:27,0:27:66.01:0,66,923	0/0:22,0:22:27.62:0,28,384	0/1:29,0:28:50.46:220,0,50	0/1:23,1:24:31.96:101,0,32	1/1:6,1:7:2.41:57,2,0
chr10	101388887	.	ACC	A	4239.38	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=6.922;DP=623;FS=29.357;HRun=4;HaplotypeScore=87.4014;InbreedingCoeff=0.8738;MQ=65.02;MQ0=8;MQRankSum=-2.368;QD=10.87;ReadPosRankSum=0.585;VQSLOD=0.5043;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:40:17.54:131,18,0	0/0:15,0:15:36:0,36,415	0/0:13,0:11:29.75:0,30,286	0/0:17,0:12:32.77:0,33,278	0/0:20,0:19:47.41:0,47,536	0/1:13,0:13:17.84:18,0,118	0/0:16,0:16:26.02:0,26,309	1/1:26,0:26:71.79:611,72,0	1/1:30,0:30:49.46:537,49,0	0/0:27,0:27:65.36:0,65,741	0/0:20,0:20:43.77:0,44,452	1/1:30,0:30:29.40:222,29,0	1/1:27,0:27:19.95:166,20,0	1/1:22,0:22:14.72:136,15,0	1/1:0,20:20:15.01:196,15,0	1/1:25,0:25:20.69:167,21,0	0/0:19,0:19:46.31:0,46,567	1/1:15,3:18:47.95:462,48,0	1/1:4,16:18:43.77:380,44,0	1/1:3,17:20:9.02:132,9,0	1/1:5,35:39:15.96:255,16,0	0/0:27,0:26:65.30:0,65,781	0/0:12,0:12:24.04:0,24,302	0/0:25,0:25:37.15:0,37,539	0/0:22,0:22:2.22:0,2,255	1/1:3,24:26:56.76:562,57,0	1/1:4,20:24:14.90:150,15,0	1/1:1,6:7:9.02:114,9,0
chr10	101389335	.	A	ATT	1868.48	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.929;DP=599;FS=4.290;HRun=9;HaplotypeScore=77.1767;InbreedingCoeff=0.9791;MQ=72.53;MQ0=0;MQRankSum=-2.362;QD=14.83;ReadPosRankSum=1.870;VQSLOD=1.7322;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:24:44.24:151,44,0	0/0:11,0:11:33.08:0,33,351	0/0:14,0:15:25.49:0,25,254	0/0:13,0:12:11.36:0,11,99	0/0:33,0:33:81.19:0,81,862	0/0:26,0:26:69.16:0,69,734	0/0:17,0:17:42.07:0,42,447	0/0:25,0:25:63.14:0,63,664	1/1:3,0:23:44.92:154,45,0	0/0:22,0:22:51.11:0,51,537	0/0:21,0:21:60.12:0,60,624	1/1:2,19:21:48.16:739,48,0	1/1:1,18:21:55.93:802,56,0	1/1:3,0:22:8.53:96,9,0	0/0:28,0:28:81.16:0,81,844	1/1:2,0:15:32.44:111,32,0	0/0:17,0:17:48.11:0,48,511	0/0:12,0:12:30.07:0,30,319	0/0:26,0:26:57.10:0,57,600	0/0:30,0:30:75.15:0,75,798	0/0:15,0:15:42.10:0,42,447	0/0:29,0:29:81.18:0,81,853	0/0:20,0:20:48.11:0,48,511	0/0:14,0:14:36.08:0,36,383	0/0:27,0:27:75.17:0,75,798	0/0:23,0:23:63.15:0,63,670	0/0:33,0:33:93.23:0,93,990	0/0:16,0:16:36.05:0,36,383
chr10	101390811	.	CA	C	6165.69	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=5.356;DP=548;FS=0.703;HRun=5;HaplotypeScore=60.3473;InbreedingCoeff=0.9464;MQ=73.94;MQ0=0;MQRankSum=-4.328;QD=29.36;ReadPosRankSum=-0.479;VQSLOD=4.9621;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:62.25:0,62,421	0/0:3,0:3:9.03:0,9,123	0/0:10,0:10:27.06:0,27,328	0/1:8,0:8:0.81:1,0,218	0/0:26,0:26:75.23:0,75,996	0/0:22,0:22:57.18:0,57,764	0/0:13,0:13:33.11:0,33,451	1/1:3,34:37:99:1123,99,0	0/0:18,0:18:53.33:0,53,354	0/0:27,0:27:72.23:0,72,957	0/0:20,0:20:60.19:0,60,807	0/0:15,0:15:41.38:0,41,267	0/0:21,0:21:56.18:0,56,364	0/0:30,0:30:78.24:0,78,1037	1/1:1,24:25:57.16:647,57,0	0/0:12,0:12:35.48:0,35,230	0/0:20,0:20:54.18:0,54,739	1/1:2,23:25:69.18:772,69,0	1/1:1,24:25:72.19:807,72,0	1/1:2,20:22:54.15:613,54,0	1/1:2,9:11:27.08:306,27,0	0/0:18,0:18:51.17:0,51,698	0/0:30,0:30:87.29:0,87,1189	0/0:10,0:10:30.10:0,30,410	0/0:19,0:19:57.19:0,57,779	1/1:0,22:22:66.17:739,66,0	1/1:1,26:27:78.22:885,78,0	1/1:0,8:8:24.07:272,24,0
chr10	101391074	.	A	AAC	3888.30	PASS	AB=0.921;AC=24;AF=0.429;AN=56;BaseQRankSum=1.758;DP=600;FS=4.339;HRun=0;HaplotypeScore=112.5598;InbreedingCoeff=0.5447;MQ=66.52;MQ0=26;MQRankSum=-0.491;QD=12.92;ReadPosRankSum=-1.490;VQSLOD=3.2544;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:19:5.46:11,0,5	0/0:7,0:7:18.04:0,18,197	0/0:54,0:20:17.11:0,17,256	0/0:58,0:27:47.83:0,48,503	0/0:21,0:22:59.47:0,59,648	0/0:20,0:20:51.11:0,51,597	0/0:15,0:14:33.10:0,33,399	1/1:27,0:26:42.14:649,42,0	0/1:22,0:22:11.06:11,0,13	0/0:14,0:14:36.10:0,36,430	0/0:12,0:12:24.08:0,24,296	1/1:23,0:23:35.12:365,35,0	1/1:18,0:18:15.95:257,16,0	1/1:3,19:24:20.96:305,21,0	1/1:19,2:20:9.03:132,9,0	0/1:15,0:14:22.40:22,0,24	0/0:23,0:23:38.77:0,39,462	1/1:20,2:22:2.68:500,3,0	1/1:13,1:14:18.06:266,18,0	1/1:19,1:20:39.08:491,39,0	0/1:11,16:27:22.09:136,0,22	0/0:18,0:18:34.84:0,35,407	0/0:17,0:17:32.62:0,33,356	0/0:20,0:20:31.05:0,31,306	0/0:19,0:19:48.15:0,48,592	0/1:18,1:19:27.03:501,0,27	0/1:19,1:20:13.46:129,0,13	1/1:6,0:5:9:112,9,0
chr10	101391087	.	AC	A	2442.05	PASS	AB=0.992;AC=15;AF=0.268;AN=56;BaseQRankSum=8.013;DP=642;FS=5.166;HRun=2;HaplotypeScore=113.8911;InbreedingCoeff=0.5319;MQ=55.27;MQ0=36;MQRankSum=-1.478;QD=11.85;ReadPosRankSum=-1.270;VQSLOD=1.7451;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,14:24:14.97:191,15,0	0/0:7,0:7:16.52:0,17,147	0/0:48,0:14:22.68:0,23,331	0/0:51,0:20:57.04:0,57,677	0/0:23,0:23:61.25:0,61,745	0/0:26,0:26:61.62:0,62,760	0/0:18,0:16:38.56:0,39,502	0/1:22,0:21:70.65:71,0,152	1/1:3,23:26:48.15:605,48,0	0/0:17,1:17:9.56:0,10,516	0/0:15,0:14:37.35:0,37,439	1/1:17,6:23:53.74:605,54,0	1/1:10,9:19:51.13:571,51,0	0/0:27,0:25:23.39:0,23,205	0/0:26,0:24:8.58:0,9,66	1/1:2,14:15:11.38:381,11,0	0/0:25,0:25:47.87:0,48,696	0/1:24,1:25:25.19:25,0,218	0/0:12,0:10:9.03:0,9,169	0/1:22,0:22:99:165,0,114	0/0:33,0:31:18.05:0,18,190	0/0:20,0:20:43.67:0,44,601	0/0:21,0:21:35.97:0,36,425	0/0:25,0:25:44.91:0,45,444	0/0:24,0:24:63.85:0,64,803	0/1:19,0:19:5.90:6,0,135	0/0:17,0:17:6.01:0,6,202	0/1:7,0:5:2.82:3,0,23
chr10	101391088	.	C	CCACA	1238.52	PASS	AB=0.818;AC=17;AF=0.327;AN=52;BaseQRankSum=-0.493;DP=649;FS=2.143;HRun=0;HaplotypeScore=154.7319;InbreedingCoeff=-0.2089;MQ=55.07;MQ0=36;MQRankSum=0.575;QD=3.80;ReadPosRankSum=0.109;VQSLOD=2.7082;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:0.34:0,0,1	0/0:4,0:7:9.01:0,9,84	./.	./.	0/1:22,0:24:11.67:12,0,272	0/0:22,0:26:20.11:0,20,234	0/0:18,0:16:14.91:0,15,202	0/0:23,0:22:0.12:0,0,34	0/1:24,0:24:28.89:29,0,44	0/1:19,0:18:27.87:28,0,62	0/0:15,0:14:18.04:0,18,223	0/0:21,0:22:8.15:0,8,50	0/1:19,0:19:18.07:18,0,61	0/1:27,0:25:9.81:10,0,282	0/1:8,0:25:59.89:143,0,60	0/0:17,0:16:10.05:0,10,83	0/0:23,0:26:28.58:0,29,418	0/1:21,0:25:97.56:98,0,197	0/1:9,0:8:21.71:22,0,68	0/1:6,0:22:99:135,0,148	0/1:33,1:33:84.20:84,0,171	0/0:17,0:20:27.44:0,27,362	1/1:13,8:22:6.02:141,6,0	0/1:8,14:28:17.17:434,0,17	0/0:24,0:24:26.12:0,26,341	0/1:4,0:20:9.48:141,0,9	0/1:6,0:17:59.09:73,0,59	1/1:7,0:5:5.36:23,5,0
chr10	101391093	.	CA	C	1162.25	PASS	AB=0.988;AC=10;AF=0.179;AN=56;BaseQRankSum=7.454;DP=641;FS=6.839;HRun=1;HaplotypeScore=122.9913;InbreedingCoeff=0.6906;MQ=51.97;MQ0=36;MQRankSum=-3.351;QD=7.60;ReadPosRankSum=-1.474;VQSLOD=0.1643;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,1:26:3.54:43,4,0	0/0:6,0:6:8.33:0,8,53	0/1:40,1:9:22.70:23,0,232	0/0:52,0:17:45.07:0,45,543	0/0:23,0:22:54.67:0,55,681	0/0:26,0:26:57.70:0,58,717	0/0:18,0:16:38.34:0,38,512	0/0:22,0:21:31.19:0,31,393	1/1:23,1:24:33.05:197,33,0	0/0:20,0:19:54.95:0,55,657	0/0:14,0:13:34.49:0,34,411	1/1:18,5:24:53:613,53,0	1/1:12,2:18:36.28:386,36,0	0/0:27,0:25:29.97:0,30,458	0/0:22,0:20:14.88:0,15,198	0/1:17,0:16:51.02:62,0,51	0/0:29,0:29:53.93:0,54,811	0/0:22,0:22:51.63:0,52,568	0/0:12,0:10:27:0,27,340	0/0:20,0:20:34.16:0,34,404	0/0:34,0:32:32.11:0,32,413	0/0:20,0:20:47:0,47,643	0/0:22,0:22:33.10:0,33,410	0/0:29,0:29:50.95:0,51,575	0/0:22,0:22:57.46:0,57,736	0/0:22,0:22:63.14:0,63,753	0/0:19,0:18:27.97:0,28,378	0/0:7,0:5:12.39:0,12,107
chr10	101391095	.	CA	C	1335.43	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.763;DP=646;FS=1.710;HRun=1;HaplotypeScore=121.6301;InbreedingCoeff=0.9211;MQ=50.68;MQ0=37;MQRankSum=-4.392;QD=11.92;ReadPosRankSum=-2.450;VQSLOD=1.3571;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,9:25:14.55:93,15,0	0/0:6,0:6:8.33:0,8,53	0/0:39,0:6:9.09:0,9,148	0/0:56,0:16:42.08:0,42,506	0/0:23,0:22:54.67:0,55,680	0/0:23,0:23:48.68:0,49,602	0/0:19,0:17:41.33:0,41,537	0/0:22,0:20:49.34:0,49,553	1/1:4,19:24:53.62:497,54,0	0/0:21,0:20:56.15:0,56,676	0/0:14,0:13:34.48:0,34,399	1/1:24,0:24:16.70:205,17,0	1/1:16,3:19:50.57:488,51,0	0/0:29,0:27:38.98:0,39,556	0/0:22,0:20:14.88:0,15,197	1/1:5,11:16:3.96:217,4,0	0/0:30,0:30:56.97:0,57,820	0/0:23,0:23:58.45:0,58,653	0/0:12,0:10:27:0,27,344	0/0:21,0:21:37.49:0,37,441	0/0:35,0:33:38.11:0,38,471	0/0:20,0:20:47:0,47,644	0/0:22,0:22:33.08:0,33,396	0/0:29,0:29:50.95:0,51,578	0/0:20,0:20:51.43:0,51,648	0/0:22,0:22:66.21:0,66,869	0/0:19,0:18:27.93:0,28,367	0/0:7,0:5:15.02:0,15,149
chr10	101391781	.	GT	G	13621.65	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=13.122;DP=807;FS=11.368;HRun=4;HaplotypeScore=81.7922;InbreedingCoeff=1.0000;MQ=72.86;MQ0=0;MQRankSum=-3.515;QD=30.34;ReadPosRankSum=5.008;VQSLOD=4.2990;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:38:99:1188,99,0	0/0:13,0:13:39.12:0,39,531	0/0:29,0:28:75.86:0,76,1089	0/0:29,0:28:77.55:0,78,987	0/0:34,0:34:99:0,99,1383	0/0:22,0:22:63.21:0,63,882	0/0:12,0:12:36.12:0,36,503	1/1:2,29:31:84.23:983,84,0	1/1:3,23:26:66.20:792,66,0	0/0:42,0:42:99:0,120,1621	0/0:31,0:31:84.28:0,84,1176	1/1:2,33:35:96.29:1152,96,0	1/1:2,34:36:93.28:1115,93,0	1/1:4,33:37:84.26:1008,84,0	1/1:4,32:36:84.26:1008,84,0	1/1:0,25:25:63.19:756,63,0	0/0:29,0:29:81.26:0,81,1114	1/1:0,13:13:36.11:432,36,0	1/1:0,19:19:57.17:671,57,0	1/1:2,33:35:87.23:1035,87,0	1/1:2,39:41:99:1224,102,0	0/0:30,0:30:87.29:0,87,1216	0/0:30,0:30:84.27:0,84,1154	0/0:25,0:25:72.24:0,72,1008	0/0:32,0:32:90.28:0,90,1225	1/1:3,27:30:81.19:928,81,0	1/1:1,27:28:63.19:755,63,0	1/1:2,17:19:48.15:576,48,0
chr10	101393084	.	T	TA	2247.90	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.001;DP=525;FS=0.000;HRun=9;HaplotypeScore=52.3433;InbreedingCoeff=0.9508;MQ=75.67;MQ0=0;MQRankSum=-1.260;QD=24.43;ReadPosRankSum=2.926;VQSLOD=4.2701;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:47.94:709,48,0	0/0:9,0:9:20.98:0,21,182	0/0:16,0:15:16.13:0,16,132	0/0:14,0:14:3.42:0,3,195	0/0:30,0:30:83.93:0,84,719	0/0:21,0:21:53.99:0,54,468	0/0:13,0:13:29.98:0,30,260	0/0:28,0:28:68.95:0,69,593	1/1:1,6:7:18.05:199,18,0	0/0:26,0:26:56.94:0,57,486	0/0:23,0:23:53.97:0,54,469	1/1:3,15:18:36.10:398,36,0	1/1:2,19:21:60.13:651,60,0	0/0:20,0:20:56.99:0,57,495	0/0:18,0:18:47.01:0,47,394	1/1:0,17:17:42.11:465,42,0	0/0:17,0:17:50.99:0,51,443	0/0:15,0:15:38.94:0,39,331	0/0:15,0:15:35.96:0,36,307	0/0:33,0:33:89.95:0,90,777	0/0:7,0:7:17.99:0,18,156	0/0:14,0:14:38.97:0,39,333	0/0:16,0:16:44.99:0,45,391	0/0:9,0:9:20.99:0,21,182	0/0:26,0:26:71.97:0,72,625	0/0:28,0:28:59.95:0,60,518	0/0:28,0:28:74.97:0,75,651	0/0:6,0:6:15:0,15,130
chr10	101393942	.	C	CA	929.40	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=4.803;DP=410;FS=40.561;HRun=7;HaplotypeScore=84.0098;InbreedingCoeff=0.7768;MQ=69.85;MQ0=0;MQRankSum=-3.316;QD=17.87;ReadPosRankSum=0.465;VQSLOD=1.2646;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:19:42.13:505,42,0	0/0:6,0:6:18.03:0,18,174	0/1:13,0:13:11.18:11,0,70	0/0:10,0:8:2.68:0,3,96	0/0:24,0:24:63.10:0,63,608	0/0:10,0:10:27.04:0,27,261	0/0:13,0:13:12.26:0,12,307	0/0:27,0:27:66.05:0,66,628	1/1:4,10:14:33.09:388,33,0	0/0:15,0:15:36.05:0,36,348	0/0:15,0:15:39.06:0,39,376	0/0:10,0:10:24.04:0,24,231	0/0:10,0:10:30.02:0,30,279	0/0:10,0:10:30.05:0,30,288	0/0:20,0:20:54.06:0,54,511	1/1:2,4:6:15.03:170,15,0	0/0:14,0:13:36.02:0,36,335	0/0:14,0:14:42.06:0,42,400	0/0:15,0:15:39.53:0,40,376	0/0:19,0:19:53.42:0,53,488	0/0:7,0:7:18.01:0,18,167	0/0:8,0:8:18.01:0,18,168	0/0:14,0:14:39.06:0,39,376	0/0:12,0:12:23.97:0,24,231	0/0:27,0:26:72.10:0,72,691	0/0:22,0:22:60.09:0,60,578	0/0:25,0:25:69.04:0,69,645	0/0:11,0:11:27.01:0,27,252
chr10	101393989	.	GATGCCCAAATGCATTTCTTTA	G	3852.78	PASS	AC=16;AF=0.308;AN=52;BaseQRankSum=7.625;DP=329;FS=0.859;HRun=0;HaplotypeScore=216.7450;InbreedingCoeff=0.8823;MQ=72.79;MQ0=1;MQRankSum=-6.112;QD=128.43;ReadPosRankSum=3.475;VQSLOD=3.4309;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.25:0,72,6790	0/0:6,0:6:18.06:0,18,1464	0/0:14,0:14:39.13:0,39,2463	0/0:18,0:17:41.90:0,42,2414	0/0:19,0:19:57.18:0,57,4591	0/0:16,0:16:42.14:0,42,4271	0/0:16,0:16:48.16:0,48,4474	./.	0/0:15,0:15:42.14:0,42,3633	0/0:16,0:16:48.16:0,48,4302	0/0:12,0:12:36.12:0,36,3053	0/0:18,0:18:51.17:0,51,4246	0/0:13,0:13:39.13:0,39,3557	./.	1/1:1,5:6:15.05:782,15,0	0/0:13,0:13:39.13:0,39,3607	0/0:22,0:21:54.19:0,54,5054	1/1:1,1:2:5.99:198,6,0	1/1:0,1:1:3.01:177,3,0	1/1:1,1:3:9.02:276,9,0	1/1:1,1:3:6.02:135,6,0	0/0:13,0:13:39.13:0,39,3859	0/0:18,0:18:54.19:0,54,4658	0/0:18,0:18:54.19:0,54,4989	0/0:23,0:22:69.24:0,69,5857	1/1:1,7:8:24.07:1215,24,0	1/1:0,5:6:18.06:906,18,0	1/1:0,1:1:3.01:163,3,0
chr10	101394019	.	TA	T	470.73	PASS	AB=0.929;AC=15;AF=0.288;AN=52;BaseQRankSum=7.440;DP=396;FS=10.653;HRun=1;HaplotypeScore=100.8566;InbreedingCoeff=0.7274;MQ=60.36;MQ0=18;MQRankSum=-6.123;QD=9.41;ReadPosRankSum=1.158;VQSLOD=0.3156;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,2:26:52.02:52,0,495	0/0:7,0:7:15.01:0,15,177	0/0:27,0:14:38.96:0,39,570	0/0:32,0:18:50.79:0,51,709	0/0:18,0:16:45.13:0,45,646	0/0:20,0:20:48.15:0,48,693	0/0:22,1:21:54.62:0,55,691	./.	0/0:11,2:13:23.40:0,23,412	0/0:18,0:18:51.17:0,51,813	0/0:17,0:17:47.75:0,48,709	0/0:21,0:19:41.40:0,41,552	0/0:14,0:14:18.15:0,18,508	./.	1/1:0,5:5:14.51:100,15,0	0/0:19,3:22:52.77:0,53,620	0/0:29,1:28:63.67:0,64,967	1/1:0,2:2:3.90:41,4,0	1/1:0,1:1:3.01:41,3,0	1/1:0,1:1:2.98:21,3,0	0/0:2,1:1:2.84:0,3,14	0/0:14,0:14:42.14:0,42,667	0/0:19,0:18:47.66:0,48,728	0/0:24,0:24:66.20:0,66,992	0/0:21,0:21:59.32:0,59,891	1/1:1,7:8:21.04:231,21,0	1/1:1,5:6:10.96:126,11,0	1/1:0,1:1:3:26,3,0
chr10	101394020	.	AGT	A	521.76	PASS	AB=0.896;AC=11;AF=0.289;AN=38;BaseQRankSum=-0.827;DP=402;FS=0.000;HRun=0;HaplotypeScore=107.7379;InbreedingCoeff=0.2508;MQ=58.66;MQ0=20;MQRankSum=3.182;QD=3.32;ReadPosRankSum=-1.571;VQSLOD=2.1769;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:32.95:0,33,218	1/1:3,0:7:5.68:28,6,0	./.	0/0:32,0:18:0:0,0,0	0/1:14,4:16:92.23:92,0,150	1/1:12,8:20:12.50:132,13,0	1/1:16,5:21:32.84:315,33,0	./.	0/0:15,0:15:20.96:0,21,189	0/0:18,0:18:11.93:0,12,134	0/1:15,1:16:8.80:9,0,261	0/0:19,0:20:17.58:0,18,153	0/0:14,0:14:9.30:0,9,171	./.	./.	0/0:20,0:22:35.64:0,36,279	0/1:24,6:29:27.01:27,0,365	./.	./.	./.	./.	0/0:14,0:14:8.59:0,9,152	0/1:17,2:18:44.69:45,0,235	0/0:25,0:24:15.22:0,15,531	0/1:23,0:22:6.02:6,0,327	0/0:8,0:8:2.60:0,3,10	0/0:5,0:6:2.90:0,3,16	./.
chr10	101394035	.	GT	G	265.33	PASS	AB=0.788;AC=13;AF=0.241;AN=54;BaseQRankSum=8.376;DP=463;FS=4.432;HRun=1;HaplotypeScore=105.5763;InbreedingCoeff=0.5427;MQ=49.03;MQ0=30;MQRankSum=-7.939;QD=6.98;ReadPosRankSum=-0.116;VQSLOD=0.6772;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:63.18:0,63,855	0/1:7,0:7:0.26:0,0,19	0/0:29,0:6:18.06:0,18,222	0/0:40,1:15:23.30:0,23,458	0/0:25,0:23:57.62:0,58,673	0/0:21,0:21:44.22:0,44,449	0/0:24,0:22:48.66:0,49,384	0/0:5,0:3:6.02:0,6,77	0/0:19,0:19:36.09:0,36,456	0/0:18,0:18:51.17:0,51,687	0/0:21,0:20:56.21:0,56,758	0/0:24,0:21:27.65:0,28,527	0/0:14,0:14:42.10:0,42,547	./.	1/1:2,4:5:13.01:67,13,0	0/0:22,0:22:51.99:0,52,628	0/0:36,0:34:79.79:0,80,1071	0/1:3,1:4:27.73:28,0,58	1/1:2,1:1:3.01:34,3,0	1/1:1,1:2:2.06:13,2,0	0/0:4,1:3:3.01:0,3,43	0/0:15,0:15:45.14:0,45,611	0/0:20,0:19:52.23:0,52,682	0/0:30,0:29:80.30:0,80,1141	0/0:21,0:20:56.95:0,57,759	0/1:2,7:9:21.58:158,0,22	1/1:1,5:6:10.49:94,10,0	1/1:0,1:1:2.96:19,3,0
chr10	101394061	.	GTT	G	3492.09	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-1.371;DP=557;FS=9.680;HRun=5;HaplotypeScore=100.5576;InbreedingCoeff=0.7492;MQ=58.12;MQ0=26;MQRankSum=-0.890;QD=12.21;ReadPosRankSum=-2.513;VQSLOD=-0.4960;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:38:49.05:491,49,0	0/0:8,0:8:16.22:0,16,110	0/0:43,0:14:22.99:0,23,317	0/0:38,0:18:39.49:0,39,358	0/0:21,0:21:28.24:0,28,468	0/0:15,0:15:1.47:0,1,154	0/0:24,0:22:6.41:0,6,249	1/1:32,0:30:86.73:720,87,0	0/1:16,0:16:8.56:102,0,9	0/0:7,0:7:15.04:0,15,199	0/0:19,0:18:37.46:0,37,511	0/1:16,0:15:5.73:74,0,6	1/1:23,0:23:42.65:353,43,0	1/1:12,0:11:11.88:89,12,0	1/1:18,0:17:14.95:119,15,0	0/1:21,0:21:18.37:77,0,18	0/0:26,0:25:38.79:0,39,647	1/1:20,0:20:55.03:376,55,0	1/1:15,0:13:26.75:209,27,0	1/1:17,0:17:23.93:189,24,0	1/1:13,0:13:16.80:130,17,0	0/0:12,0:12:27.05:0,27,332	0/0:15,0:15:22.84:0,23,377	0/0:28,0:27:65.78:0,66,936	0/0:15,0:14:39.45:0,39,530	1/1:5,12:15:20.40:152,20,0	1/1:23,0:22:37.41:329,37,0	1/1:4,0:4:11.89:84,12,0
chr10	101394486	.	T	TCA	2027.52	PASS	AB=0.791;AC=23;AF=0.442;AN=52;BaseQRankSum=5.529;DP=660;FS=8.147;HRun=0;HaplotypeScore=123.8613;InbreedingCoeff=0.6842;MQ=66.76;MQ0=6;MQRankSum=-7.158;QD=6.94;ReadPosRankSum=-5.821;VQSLOD=0.4604;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:44:5.12:0,5,387	0/0:8,0:12:11.15:0,11,56	./.	./.	0/0:19,0:21:20.72:0,21,193	0/0:29,0:29:39.08:0,39,420	0/0:33,0:34:35.76:0,36,358	1/1:21,0:20:24.95:184,25,0	0/0:14,0:15:23.90:0,24,245	0/1:19,0:20:8.11:8,0,147	0/0:13,0:14:21.10:0,21,191	0/1:21,6:30:18:164,0,18	1/1:13,16:32:6.10:499,6,0	0/1:12,14:26:41.72:246,0,42	1/1:30,0:33:12:104,12,0	0/0:39,0:39:60.12:0,60,643	0/0:26,0:28:20.73:0,21,341	1/1:11,0:13:11.99:108,12,0	1/1:18,0:19:11.99:108,12,0	1/1:13,0:13:5.95:51,6,0	1/1:26,0:26:6:69,6,0	0/0:15,0:15:18.05:0,18,195	0/0:15,0:17:26.74:0,27,259	0/0:27,0:30:29.88:0,30,300	0/0:14,0:16:20.70:0,21,185	1/1:23,0:23:35.37:288,35,0	1/1:24,0:28:26.93:250,27,0	1/1:6,0:7:15.01:146,15,0
chr10	101395925	.	A	AT	3187.04	PASS	AB=0.824;AC=28;AF=0.500;AN=56;BaseQRankSum=-1.897;DP=647;FS=10.789;HRun=13;HaplotypeScore=86.2191;InbreedingCoeff=0.6390;MQ=70.61;MQ0=0;MQRankSum=-1.015;QD=9.37;ReadPosRankSum=-3.828;VQSLOD=0.9648;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:22:36.61:0,37,106	1/1:1,9:11:26.87:237,27,0	0/1:11,1:11:22.51:29,0,23	0/0:13,0:13:10.34:0,10,69	0/0:33,3:36:17.98:0,18,362	0/0:35,0:37:85.22:0,85,579	0/0:17,0:18:13.76:0,14,205	1/1:11,16:28:27.11:348,27,0	0/0:25,0:25:29.37:0,29,204	0/0:37,2:39:24.53:0,25,458	0/1:15,1:17:1.19:1,0,137	1/1:5,20:25:0.44:147,0,0	1/1:11,26:37:15.16:262,15,0	1/1:15,7:23:50.69:412,51,0	1/1:12,19:32:20.01:291,20,0	0/0:13,0:26:29.43:0,29,110	0/0:18,0:18:5.59:0,6,158	1/1:3,10:14:17.86:154,18,0	1/1:16,24:44:34.51:617,35,0	1/1:7,14:22:24.25:344,24,0	0/1:2,6:8:2.56:121,0,3	0/1:19,4:24:30.11:30,0,103	0/0:18,0:18:26.66:0,27,185	0/0:18,0:19:13.73:0,14,208	0/0:33,1:36:26.62:0,27,312	1/1:10,13:23:0.85:283,1,0	1/1:6,12:18:9.01:84,9,0	1/1:1,1:2:3:28,3,0
chr10	101396833	.	TA	T	2981.76	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=13.135;DP=659;FS=0.937;HRun=1;HaplotypeScore=69.8192;InbreedingCoeff=0.9886;MQ=86.60;MQ0=0;MQRankSum=-1.133;QD=35.50;ReadPosRankSum=3.780;VQSLOD=3.9058;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.21:0,63,1003	0/0:9,0:9:27.09:0,27,431	0/0:21,0:21:63.17:0,63,938	0/0:25,0:25:75.19:0,75,1127	0/0:30,0:30:90.28:0,90,1390	0/0:31,0:31:93.32:0,93,1482	0/0:21,0:21:63.13:0,63,949	0/0:30,0:30:90.27:0,90,1344	0/0:17,0:17:51.15:0,51,790	0/0:24,0:24:72.24:0,72,1128	0/0:22,0:22:63.10:0,63,949	1/1:0,26:26:66.22:923,66,0	1/1:0,29:29:81.23:1111,81,0	1/1:0,29:29:78.26:1091,78,0	0/0:38,0:38:99:0,114,1818	0/0:37,0:37:99:0,111,1702	0/0:26,0:26:78.27:0,78,1245	0/0:21,0:21:63.15:0,63,953	0/0:18,0:18:54.12:0,54,789	0/0:24,0:24:72.23:0,72,1123	0/0:29,0:29:84.27:0,84,1313	0/0:14,0:14:42.13:0,42,649	0/0:18,0:18:54.16:0,54,827	0/0:21,0:21:63.21:0,63,1003	0/0:20,0:20:60.18:0,60,934	0/0:17,0:17:51.16:0,51,791	0/0:35,0:34:99:0,105,1653	0/0:4,0:4:12:0,12,143
chr10	101397313	.	G	GATAT	1894.07	PASS	AB=1.000;AC=15;AF=0.375;AN=40;BaseQRankSum=3.391;DP=216;FS=0.000;HRun=0;HaplotypeScore=56.2902;InbreedingCoeff=0.3367;MQ=70.69;MQ0=3;MQRankSum=-4.740;QD=15.40;ReadPosRankSum=-3.408;VQSLOD=2.0732;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:2.99:23,3,0	0/1:3,0:3:0:0,0,0	0/0:9,0:6:0:0,0,0	./.	0/0:6,0:6:3.01:0,3,50	0/0:1,0:1:3.01:0,3,47	0/0:5,0:5:3.01:0,3,47	1/1:28,26:53:99:1524,103,0	0/0:5,0:5:12.03:0,12,170	0/0:4,0:4:6.02:0,6,81	0/0:2,0:2:3.01:0,3,50	./.	./.	./.	1/1:10,0:10:3.01:31,3,0	./.	0/0:17,0:16:39.13:0,39,635	0/1:10,0:10:7.21:60,0,7	1/1:11,0:11:0.20:145,0,0	./.	./.	./.	0/0:4,0:4:3.01:0,3,50	0/0:4,0:4:3.01:0,3,49	0/0:5,0:5:8.76:0,9,148	1/1:7,1:8:6.19:180,6,0	0/1:17,0:17:8.48:8,0,40	1/1:6,0:4:3.01:46,3,0
chr10	101397327	.	TATACAC	T	1679.94	PASS	AB=0.765;AC=14;AF=0.333;AN=42;BaseQRankSum=3.563;DP=160;FS=1.781;HRun=0;HaplotypeScore=56.3716;InbreedingCoeff=0.2853;MQ=45.93;MQ0=6;MQRankSum=-2.470;QD=16.31;ReadPosRankSum=0.440;VQSLOD=2.4556;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:2.99:23,3,0	0/0:2,0:2:0:0,0,0	0/0:4,0:1:0:0,0,0	./.	0/0:4,0:4:3.01:0,3,50	0/0:1,0:1:3.01:0,3,50	0/0:2,0:2:3.01:0,3,50	0/1:46,0:45:99:946,0,264	0/0:4,0:4:12.03:0,12,175	0/0:2,0:2:6.02:0,6,164	0/0:1,0:1:3.01:0,3,50	./.	./.	./.	1/1:2,6:8:3.01:30,3,0	0/1:0,1:1:0:0,0,0	0/0:19,0:17:37.71:0,38,788	1/1:5,1:5:9.50:163,10,0	1/1:8,3:10:21.07:356,21,0	./.	./.	./.	0/0:2,0:2:3.01:0,3,50	0/0:3,0:3:3.01:0,3,38	0/0:4,0:4:9.03:0,9,159	0/1:6,0:6:5.66:177,0,6	0/1:3,11:14:41.94:64,0,42	1/1:7,0:4:3.01:46,3,0
chr10	101397370	.	ATGTGTGTGTGTGTGTGTG	A	795.38	PASS	AC=6;AF=0.250;AN=24;BaseQRankSum=3.928;DP=135;FS=3.969;HRun=0;HaplotypeScore=88.1467;InbreedingCoeff=0.5009;MQ=33.94;MQ0=17;MQRankSum=-1.293;QD=30.59;ReadPosRankSum=1.342;VQSLOD=1.6201;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	0/0:6,0:5:6.02:0,6,400	0/0:21,0:19:3.01:0,3,56	0/0:4,0:4:3.01:0,3,189	0/0:3,0:3:6.02:0,6,285	./.	./.	./.	./.	./.	1/1:1,0:2:3.01:130,3,0	0/0:20,0:17:27.04:0,27,1718	0/0:5,3:8:3.01:0,3,74	1/1:17,1:17:9.03:425,9,0	./.	./.	./.	./.	0/0:6,0:6:9.03:0,9,650	0/0:3,0:3:3.01:0,3,205	1/1:2,4:6:12.02:340,12,0	0/0:8,0:6:1.25:0,1,3	./.
chr10	101397402	.	GTGTGTGTGTGTGTGTGTA	G	679.45	PASS	AB=0.923;AC=7;AF=0.206;AN=34;BaseQRankSum=4.646;DP=155;FS=9.728;HRun=0;HaplotypeScore=66.3577;InbreedingCoeff=-0.0779;MQ=43.95;MQ0=20;MQRankSum=-0.759;QD=18.36;ReadPosRankSum=1.872;VQSLOD=0.1230;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:17,0:5:8.18:0,8,114	0/0:14,0:5:14.89:0,15,116	./.	./.	0/0:11,0:10:18.06:0,18,928	0/1:14,0:13:13.98:14,0,339	0/0:7,0:7:3.01:0,3,214	0/0:3,0:3:9.02:0,9,319	./.	./.	./.	./.	./.	1/1:1,0:1:3.01:112,3,0	0/0:15,0:13:33.07:0,33,2045	0/0:5,0:5:8.94:0,9,111	0/1:3,5:6:45.94:387,0,46	0/1:4,0:2:13.99:19,0,14	0/1:4,0:4:19.97:20,0,89	0/0:5,0:5:5.69:0,6,30	./.	0/0:11,0:11:18.01:0,18,1018	0/0:2,0:2:6.02:0,6,447	0/1:6,0:6:28.07:237,0,28	0/0:6,0:4:5.85:0,6,43	./.
chr10	101398005	.	GA	G	1313.13	PASS	AB=0.958;AC=10;AF=0.179;AN=56;BaseQRankSum=7.558;DP=568;FS=5.330;HRun=10;HaplotypeScore=79.8939;InbreedingCoeff=0.7456;MQ=77.36;MQ0=1;MQRankSum=0.667;QD=11.72;ReadPosRankSum=-0.675;VQSLOD=3.1883;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:53.99:469,54,0	1/1:1,8:9:20.67:182,21,0	0/1:25,1:25:15.06:15,0,210	0/1:19,0:16:11.53:12,0,59	0/0:25,0:25:66.18:0,66,726	0/0:24,0:27:71.74:0,72,717	0/0:19,0:19:48.13:0,48,530	0/0:28,0:28:54.15:0,54,597	0/0:14,0:14:36.07:0,36,386	0/0:21,0:22:56.95:0,57,598	0/0:16,0:17:50.93:0,51,531	0/0:21,0:21:60.16:0,60,663	0/0:21,1:22:36.52:0,37,588	1/1:1,21:22:56.98:495,57,0	0/0:23,0:23:57.15:0,57,630	1/1:1,14:15:8.80:305,9,0	0/0:14,1:15:16.07:0,16,405	0/0:9,0:9:24.06:0,24,265	0/0:19,0:20:56.95:0,57,598	0/0:27,0:27:74.62:0,75,779	0/0:16,0:16:45.08:0,45,484	0/0:21,0:22:59.94:0,60,619	0/0:21,0:22:63:0,63,673	0/0:13,0:13:39.06:0,39,417	0/0:17,0:17:51.04:0,51,527	0/0:24,1:25:49.15:0,49,770	0/0:31,1:31:58.12:0,58,844	0/0:19,1:20:34.11:0,34,604
chr10	101398396	.	GA	G	265.30	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.479;DP=565;FS=8.673;HRun=1;HaplotypeScore=64.6632;InbreedingCoeff=0.9969;MQ=86.35;MQ0=0;MQRankSum=-2.159;QD=24.12;ReadPosRankSum=1.348;VQSLOD=2.8783;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.31:0,90,1439	1/1:0,11:11:30.09:360,30,0	0/0:19,0:19:52:0,52,811	0/0:22,0:22:48.16:0,48,747	0/0:26,0:26:78.25:0,78,1224	0/0:18,0:18:54.18:0,54,860	0/0:10,0:10:30.10:0,30,477	0/0:32,0:32:96.32:0,96,1513	0/0:17,0:17:51.16:0,51,777	0/0:27,0:27:81.26:0,81,1272	0/0:18,0:18:54.17:0,54,841	0/0:22,0:22:66.19:0,66,1003	0/0:24,0:24:72.23:0,72,1127	0/0:17,0:17:51.17:0,51,813	0/0:18,0:18:54.18:0,54,863	0/0:24,0:24:72.23:0,72,1122	0/0:20,0:20:60.19:0,60,936	0/0:8,0:8:24.08:0,24,383	0/0:16,0:16:48.16:0,48,761	0/0:21,0:21:57.19:0,57,908	0/0:18,0:18:54.18:0,54,863	0/0:20,0:20:60.20:0,60,956	0/0:21,0:21:63.20:0,63,979	0/0:20,0:20:60.19:0,60,932	0/0:22,0:22:66.23:0,66,1052	0/0:25,0:25:75.26:0,75,1192	0/0:19,0:19:57.19:0,57,908	0/0:20,0:20:60.20:0,60,954
chr10	101399237	.	T	TA	4371.85	PASS	AB=0.962;AC=20;AF=0.357;AN=56;BaseQRankSum=5.395;DP=636;FS=0.000;HRun=10;HaplotypeScore=105.5525;InbreedingCoeff=0.8762;MQ=71.66;MQ0=1;MQRankSum=1.992;QD=20.24;ReadPosRankSum=-2.257;VQSLOD=3.8236;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:32:46.85:0,47,137	0/1:8,0:8:8.30:15,0,8	0/0:17,0:11:14.85:0,15,130	0/1:11,0:7:1.36:1,0,56	0/0:34,0:34:92.88:0,93,760	0/0:16,0:16:47.92:0,48,390	0/0:19,0:19:47.87:0,48,381	1/1:6,30:36:65.56:865,66,0	0/0:24,0:24:57.08:0,57,473	0/0:31,1:32:46.09:0,46,569	0/0:20,0:20:56.91:0,57,464	0/0:2,0:31:50.92:0,51,148	0/0:2,0:22:40.74:0,41,119	0/0:22,0:22:55.04:0,55,416	1/1:3,19:22:26.52:482,27,0	0/0:4,0:26:45.94:0,46,147	0/0:34,0:34:98.79:0,99,797	1/1:1,11:13:32.83:316,33,0	1/1:5,12:17:35.81:327,36,0	1/1:1,30:31:87.43:846,87,0	1/1:2,4:6:12.03:127,12,0	0/0:24,0:24:59.87:0,60,484	0/0:21,0:21:47.83:0,48,376	0/0:19,0:19:44.80:0,45,356	0/0:27,0:26:72.76:0,73,584	1/1:5,21:27:29.16:601,29,0	1/1:4,30:34:63.16:665,63,0	1/1:0,9:9:12.03:127,12,0
chr10	101399943	.	T	TA	723.17	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-2.538;DP=564;FS=2.328;HRun=7;HaplotypeScore=58.0251;InbreedingCoeff=0.4581;MQ=67.86;MQ0=0;MQRankSum=1.927;QD=9.27;ReadPosRankSum=-1.597;VQSLOD=0.8924;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.05:0,57,532	0/0:6,0:6:15.02:0,15,144	0/1:11,0:10:1.01:1,0,5	0/0:5,0:4:1.26:0,1,16	0/0:37,0:37:98.99:0,99,919	0/0:19,0:19:54.09:0,54,520	0/0:15,0:15:36.04:0,36,339	0/0:31,0:31:75.03:0,75,690	0/0:17,0:17:51.06:0,51,484	0/0:28,0:28:72.06:0,72,688	0/0:20,0:20:54.03:0,54,501	0/1:21,0:21:8.69:60,0,9	0/1:23,0:23:8.29:36,0,8	1/1:1,21:23:63.19:741,63,0	0/0:18,0:18:54.07:0,54,514	0/0:27,0:27:72.57:0,73,691	0/0:26,0:26:62.37:0,62,639	0/0:23,0:23:56.76:0,57,512	0/0:25,0:25:52.08:0,52,595	0/0:21,0:21:56.53:0,57,513	0/0:12,0:12:34.53:0,35,305	0/0:17,0:17:45.03:0,45,421	0/0:11,0:11:27.04:0,27,260	0/0:11,0:11:27.04:0,27,260	0/0:20,0:20:57.08:0,57,546	0/0:20,0:20:48.03:0,48,445	0/0:34,0:34:96.13:0,96,918	0/0:23,0:23:59.93:0,60,555
chr10	101400386	.	A	AGTG	3544.72	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.910;DP=692;FS=4.333;HRun=0;HaplotypeScore=92.8212;InbreedingCoeff=0.9996;MQ=71.24;MQ0=0;MQRankSum=-1.375;QD=66.88;ReadPosRankSum=2.195;VQSLOD=4.7339;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,156,2829	0/0:10,0:10:30.09:0,30,529	0/0:20,0:18:48.16:0,48,860	0/0:25,0:24:63.19:0,63,1107	0/0:33,0:33:90.30:0,90,1625	0/0:34,0:34:99:0,102,1902	0/0:27,0:27:81.28:0,81,1480	0/0:32,0:32:93.31:0,93,1689	0/0:21,0:21:63.22:0,63,1157	0/0:28,0:28:81.27:0,81,1483	0/0:25,0:25:69.24:0,69,1280	1/1:2,27:30:81.28:1994,81,0	1/1:0,22:23:63.22:1551,63,0	0/0:17,0:17:51.17:0,51,951	0/0:23,0:23:69.24:0,69,1287	0/0:17,0:17:51.17:0,51,951	0/0:25,0:25:72.25:0,72,1323	0/0:14,0:14:36.07:0,36,671	0/0:29,0:29:87.25:0,87,1559	0/0:30,0:30:90.31:0,90,1666	0/0:30,0:30:90.29:0,90,1640	0/0:19,0:19:57.20:0,57,1063	0/0:16,0:16:48.14:0,48,833	0/0:27,0:27:75.26:0,75,1366	0/0:17,0:17:51.17:0,51,951	0/0:25,0:25:75.26:0,75,1398	0/0:26,0:26:78.27:0,78,1447	0/0:16,0:16:42.11:0,42,719
chr10	101401433	.	A	AC	5080.21	PASS	AB=0.628;AC=28;AF=0.500;AN=56;BaseQRankSum=-6.536;DP=475;FS=9.083;HRun=8;HaplotypeScore=53.3462;InbreedingCoeff=0.8662;MQ=86.42;MQ0=0;MQRankSum=-3.393;QD=22.78;ReadPosRankSum=0.545;VQSLOD=4.9166;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,8:11:27.22:289,27,0	1/1:2,1:5:8.88:70,9,0	0/0:22,0:22:33.62:0,34,293	0/0:16,0:15:9.78:0,10,141	0/0:29,0:29:84.03:0,84,763	0/0:25,0:25:63.03:0,63,576	0/0:20,0:20:57:0,57,514	1/1:2,14:16:42.10:464,42,0	0/0:15,0:15:42.02:0,42,384	0/0:18,0:18:45.01:0,45,409	0/0:17,0:17:51:0,51,458	1/1:3,0:20:37.10:208,37,0	1/1:10,2:22:42.60:295,43,0	0/1:3,6:9:0.27:237,0,0	1/1:2,20:22:51.15:589,51,0	1/1:2,10:12:30.09:346,30,0	0/0:22,0:22:57.02:0,57,522	1/1:0,5:5:15.04:173,15,0	1/1:5,9:14:27.08:311,27,0	1/1:4,24:28:47.95:804,48,0	1/1:3,16:19:39.12:449,39,0	0/0:17,0:17:42.02:0,42,384	0/0:20,0:20:45.01:0,45,412	0/0:15,0:15:36.01:0,36,329	0/0:15,0:15:45.02:0,45,412	0/1:10,11:21:64.73:336,0,65	1/1:4,10:14:36.10:409,36,0	1/1:1,4:5:9.02:100,9,0
chr10	101403313	.	GT	G	650.76	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.321;DP=598;FS=0.000;HRun=5;HaplotypeScore=87.0018;InbreedingCoeff=0.9942;MQ=74.83;MQ0=1;MQRankSum=-3.990;QD=27.11;ReadPosRankSum=0.555;VQSLOD=3.3801;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:75.21:0,75,1003	1/1:1,6:7:18.05:204,18,0	0/0:18,0:19:48.10:0,48,619	0/0:22,0:21:57.14:0,57,733	0/0:16,0:16:48.15:0,48,642	0/0:22,0:22:63.20:0,63,846	0/0:24,0:24:69.20:0,69,909	0/0:35,0:35:99:0,102,1364	0/0:15,0:15:42.12:0,42,557	0/0:26,0:26:78.25:0,78,1055	0/0:26,0:26:75.23:0,75,1006	0/0:16,0:16:45.13:0,45,585	0/0:17,0:17:45.15:0,45,615	1/1:1,16:17:51.13:566,51,0	0/0:27,0:27:78.25:0,78,1053	0/0:19,0:19:45.15:0,45,614	0/0:31,0:31:81.18:0,81,1058	0/0:22,0:22:60.12:0,60,780	0/0:21,0:21:60.20:0,60,821	0/0:17,0:17:51.16:0,51,677	0/0:10,0:10:27.09:0,27,369	0/0:8,0:8:24.07:0,24,313	0/0:18,0:18:51.17:0,51,696	0/0:19,0:19:54.18:0,54,739	0/0:22,0:22:66.19:0,66,866	0/0:40,0:40:99:0,111,1501	0/0:28,0:27:72.19:0,72,949	0/0:26,0:26:57.15:0,57,746
chr10	101403330	.	AT	A	7508.36	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=13.004;DP=597;FS=3.232;HRun=8;HaplotypeScore=74.4960;InbreedingCoeff=0.9893;MQ=75.93;MQ0=1;MQRankSum=-3.946;QD=23.61;ReadPosRankSum=0.764;VQSLOD=5.6202;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:81.12:779,81,0	1/1:2,3:5:9.01:87,9,0	0/0:23,0:23:52.64:0,53,595	0/0:29,0:27:22.37:0,22,402	0/0:21,0:21:51.16:0,51,615	0/0:20,0:20:54.17:0,54,651	0/0:21,0:21:57.17:0,57,689	1/1:6,29:35:81.10:771,81,0	0/0:13,0:13:36.10:0,36,423	0/0:26,0:26:72.21:0,72,860	0/0:28,0:28:78.23:0,78,934	1/1:0,16:16:42.07:405,42,0	1/1:1,16:17:41.96:405,42,0	1/1:3,15:18:48.07:463,48,0	1/1:4,23:27:63.08:608,63,0	1/1:0,18:18:42.07:405,42,0	0/0:29,0:29:84.26:0,84,1014	1/1:3,21:24:62.76:607,63,0	1/1:3,16:19:48.04:456,48,0	1/1:1,18:19:51.08:493,51,0	1/1:1,6:7:18.03:174,18,0	0/0:8,0:8:18.06:0,18,217	0/0:18,0:18:54.17:0,54,652	0/0:23,0:23:63.19:0,63,760	0/0:20,0:20:51.16:0,51,615	1/1:6,28:34:50.89:775,51,0	1/1:1,21:22:42.80:559,43,0	1/1:5,22:27:53.75:521,54,0
chr10	101403458	.	AT	A	6058.87	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=15.353;DP=454;FS=0.000;HRun=7;HaplotypeScore=68.8461;InbreedingCoeff=0.9430;MQ=71.41;MQ0=0;MQRankSum=-6.142;QD=25.35;ReadPosRankSum=-0.094;VQSLOD=5.1118;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,12:17:35.96:338,36,0	0/0:1,0:1:3.01:0,3,38	0/0:15,0:15:2.92:0,3,221	0/0:13,0:12:30.09:0,30,363	0/0:29,0:29:87.26:0,87,1070	0/0:17,0:17:45.14:0,45,566	0/0:12,0:12:36.12:0,36,452	1/1:6,27:33:87.20:887,87,0	0/0:8,0:8:24.08:0,24,302	0/0:15,0:15:42.13:0,42,528	0/0:30,0:30:84.27:0,84,1057	1/1:3,12:15:39.09:396,39,0	1/1:4,14:17:39.08:398,39,0	0/0:18,0:18:51.15:0,51,629	1/1:3,16:19:48.11:489,48,0	1/1:3,17:19:13.37:452,13,0	0/0:14,0:14:35.94:0,36,423	1/1:3,10:13:27.05:274,27,0	1/1:5,13:18:42.09:428,42,0	1/1:6,23:29:84.17:848,84,0	1/1:4,5:9:21.04:213,21,0	0/0:9,0:9:24.08:0,24,302	0/0:12,0:12:33.06:0,33,385	0/0:6,0:6:15.05:0,15,189	0/0:16,0:16:48.15:0,48,603	1/1:3,16:19:51.11:520,51,0	1/1:5,19:24:66.13:664,66,0	1/1:0,5:5:15.03:153,15,0
chr10	101403492	.	GA	G	6434.03	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=13.544;DP=465;FS=0.351;HRun=7;HaplotypeScore=68.0197;InbreedingCoeff=0.9884;MQ=75.10;MQ0=0;MQRankSum=-5.552;QD=26.92;ReadPosRankSum=-0.759;VQSLOD=5.1386;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,10:12:36.08:367,36,0	0/0:5,0:5:15.05:0,15,189	0/0:22,1:22:36.19:0,36,498	0/0:13,0:13:29.76:0,30,311	0/0:27,0:27:78.24:0,78,968	0/0:13,0:13:33.10:0,33,404	0/0:11,0:11:30.10:0,30,377	1/1:9,29:38:99:1056,105,0	0/0:10,0:10:27.09:0,27,339	0/0:17,0:17:48.15:0,48,604	0/0:33,0:33:96.30:0,96,1190	1/1:3,11:14:39.08:392,39,0	1/1:2,14:15:39.07:390,39,0	0/0:19,0:19:54.17:0,54,679	1/1:3,14:17:48.08:476,48,0	1/1:3,16:18:10.36:420,10,0	0/0:14,0:14:42.10:0,42,511	1/1:4,11:15:28.31:278,28,0	1/1:2,12:14:36.08:367,36,0	1/1:2,26:28:84.16:842,84,0	1/1:3,10:13:27.06:275,27,0	0/0:8,0:8:24.08:0,24,302	0/0:11,0:11:33.09:0,33,402	0/0:6,0:6:15.05:0,15,183	0/0:16,0:16:48.13:0,48,579	1/1:1,21:22:63.10:631,63,0	1/1:1,22:23:69.14:695,69,0	1/1:0,8:8:24.05:244,24,0
chr10	101403619	.	TA	T	594.07	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.003;DP=423;FS=1.755;HRun=5;HaplotypeScore=40.8346;InbreedingCoeff=0.8556;MQ=69.75;MQ0=0;MQRankSum=-0.148;QD=25.83;ReadPosRankSum=2.358;VQSLOD=2.7627;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:33.11:0,33,451	1/1:0,8:8:24.07:272,24,0	0/0:4,0:4:5.98:0,6,61	0/0:11,0:11:19.28:0,19,297	0/0:20,0:20:60.20:0,60,821	0/0:19,0:19:57.17:0,57,763	0/0:7,0:7:21.07:0,21,287	0/0:45,0:45:99:0,120,1615	0/0:10,0:10:30.06:0,30,389	0/0:27,0:27:75.24:0,75,1001	0/0:22,0:22:60.20:0,60,821	0/0:14,0:14:42.14:0,42,575	0/0:16,0:16:45.15:0,45,615	1/1:1,14:15:39.11:442,39,0	0/0:17,0:17:48.16:0,48,656	0/0:11,0:11:33.10:0,33,437	0/0:14,0:14:39.02:0,39,472	0/0:12,0:12:33.06:0,33,414	0/0:22,0:22:57.17:0,57,762	0/0:20,0:20:60.20:0,60,820	0/0:6,0:6:15.05:0,15,204	0/0:1,0:1:3.01:0,3,41	0/0:10,0:10:30.10:0,30,410	0/0:6,0:6:18.06:0,18,246	0/0:16,0:16:48.15:0,48,641	0/0:20,0:20:57.16:0,57,737	0/0:28,0:28:78.25:0,78,1052	0/0:9,0:9:27.09:0,27,369
chr10	101404058	.	GCTGT	G	1047.27	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.757;DP=563;FS=2.110;HRun=0;HaplotypeScore=114.6452;InbreedingCoeff=0.9973;MQ=64.35;MQ0=2;MQRankSum=-5.818;QD=40.28;ReadPosRankSum=1.367;VQSLOD=4.2218;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.30:0,87,2433	1/1:1,12:13:30.10:575,30,0	0/0:26,0:20:60.20:0,60,1524	0/0:26,0:21:60.12:0,60,1532	0/0:15,0:15:42.14:0,42,1140	0/0:22,0:22:60.21:0,60,1649	0/0:25,0:25:75.24:0,75,2039	0/0:29,0:29:87.28:0,87,2283	0/0:22,0:22:63.22:0,63,1749	0/0:22,0:22:66.23:0,66,1820	0/0:16,0:16:45.15:0,45,1259	0/0:14,0:14:39.13:0,39,1091	0/0:16,0:16:48.16:0,48,1343	1/1:0,13:13:32.86:594,33,0	0/0:15,0:15:45.15:0,45,1224	0/0:16,0:16:48.16:0,48,1331	0/0:34,0:34:99:0,102,2780	0/0:16,0:16:48.16:0,48,1342	0/0:30,0:28:84.29:0,84,2322	0/0:17,0:17:48.16:0,48,1255	0/0:28,0:28:75.20:0,75,2068	0/0:17,0:17:51.18:0,51,1416	0/0:14,0:14:42.14:0,42,1159	0/0:11,0:11:33.11:0,33,923	0/0:19,0:19:54.19:0,54,1511	0/0:31,0:31:93.32:0,93,2591	0/0:18,0:18:51.17:0,51,1413	0/0:7,0:7:21.07:0,21,567
chr10	101405534	.	A	AT	4838.80	PASS	AB=0.604;AC=16;AF=0.286;AN=56;BaseQRankSum=-13.187;DP=538;FS=1.586;HRun=10;HaplotypeScore=54.6637;InbreedingCoeff=0.7926;MQ=69.92;MQ0=0;MQRankSum=-0.511;QD=24.94;ReadPosRankSum=-2.744;VQSLOD=4.3464;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:19:34.63:0,35,102	0/0:3,0:3:8.99:0,9,74	0/0:12,0:13:17:0,17,128	0/0:4,0:3:5.99:0,6,49	0/0:29,0:30:70.92:0,71,569	0/0:19,0:19:50.94:0,51,419	0/0:21,1:22:27.99:0,28,436	1/1:4,29:33:84.15:863,84,0	0/0:17,0:17:41.89:0,42,339	0/0:24,0:24:50.92:0,51,419	0/0:25,0:25:44.75:0,45,518	0/0:20,0:20:56.93:0,57,468	0/0:24,0:24:65.80:0,66,534	0/0:20,0:20:47.91:0,48,394	1/1:2,20:23:59.98:622,60,0	0/0:2,0:18:30.55:0,31,90	0/0:19,0:19:50.93:0,51,419	1/1:5,9:14:11.43:317,11,0	0/1:5,9:14:16.21:255,0,16	1/1:4,25:30:74.99:771,75,0	0/1:3,6:9:25.22:168,0,25	0/0:10,0:10:20.96:0,21,172	0/0:19,1:20:18.94:0,19,362	0/0:13,0:13:32.95:0,33,271	0/0:23,0:23:67.96:0,68,548	1/1:4,21:25:66.13:691,66,0	1/1:4,26:29:60.15:640,60,0	1/1:0,16:16:48.12:512,48,0
chr10	101407392	.	T	TGGAGGG	5316.76	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-3.574;DP=400;FS=8.843;HRun=0;HaplotypeScore=79.9286;InbreedingCoeff=0.8633;MQ=63.44;MQ0=4;MQRankSum=-8.303;QD=30.21;ReadPosRankSum=-2.763;VQSLOD=2.8658;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,12:17:6.11:627,6,0	1/1:0,4:5:12.04:363,12,0	0/0:12,0:10:25.57:0,26,393	0/0:16,0:9:4.84:0,5,257	0/0:25,0:25:59.37:0,59,1082	0/0:17,0:17:45.10:0,45,822	0/0:16,0:16:42.09:0,42,717	1/1:4,3:9:18.80:294,19,0	0/0:12,0:12:30.10:0,30,621	0/0:9,0:9:24.08:0,24,512	0/0:15,0:15:36.11:0,36,669	1/1:6,10:19:21.41:534,21,0	1/1:5,9:15:17.61:543,18,0	1/1:4,9:16:21.07:582,21,0	1/1:6,9:18:21.54:660,22,0	1/1:6,5:11:15.01:400,15,0	0/0:25,0:25:69.14:0,69,1334	1/1:5,0:5:5.69:105,6,0	1/1:5,0:5:12.03:193,12,0	1/1:21,0:21:29.98:365,30,0	1/1:3,11:14:3.01:101,3,0	0/0:14,0:14:36.11:0,36,714	0/0:21,0:20:54.15:0,54,1047	0/0:22,0:22:57.19:0,57,1161	0/0:20,0:20:45.15:0,45,966	1/1:4,5:9:15.05:346,15,0	1/1:2,6:9:2.69:101,3,0	1/1:0,2:2:3.01:101,3,0
chr10	101407401	.	A	AGGGGGA	4760.08	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-5.892;DP=439;FS=9.533;HRun=0;HaplotypeScore=87.6448;InbreedingCoeff=0.7962;MQ=61.04;MQ0=11;MQRankSum=-6.749;QD=26.01;ReadPosRankSum=-0.604;VQSLOD=3.2205;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:6.13:627,6,0	1/1:7,0:7:12.04:363,12,0	0/0:17,0:10:25.57:0,26,393	0/0:21,0:11:4.34:0,4,256	0/0:25,0:25:57.15:0,57,1075	0/0:20,0:20:45.10:0,45,822	0/0:19,0:19:42.09:0,42,717	1/1:11,0:10:16.13:236,16,0	0/0:12,0:12:30.10:0,30,621	0/0:10,0:10:24.08:0,24,512	0/0:19,0:19:36.11:0,36,669	1/1:18,0:18:12.85:406,13,0	1/1:13,0:15:14.62:469,15,0	1/1:16,0:16:12.04:404,12,0	1/1:16,0:16:18.53:603,19,0	1/1:11,0:11:9.03:304,9,0	0/0:26,0:26:72.15:0,72,1397	1/1:3,0:4:5.69:105,6,0	1/1:7,0:6:9.02:153,9,0	1/1:10,6:21:29.93:346,30,0	0/1:16,0:15:26.80:194,0,27	0/0:19,0:19:39.12:0,39,776	0/0:22,0:20:54.15:0,54,1047	0/0:24,0:24:57.19:0,57,1161	0/0:20,0:20:45.15:0,45,966	1/1:10,0:10:15.05:346,15,0	1/1:9,0:8:2.81:101,3,0	1/1:2,0:2:3.01:101,3,0
chr10	101407993	.	AGT	A	1308.93	PASS	AB=0.858;AC=27;AF=0.587;AN=46;BaseQRankSum=9.472;DP=631;FS=1.241;HRun=0;HaplotypeScore=139.9043;InbreedingCoeff=0.3711;MQ=51.45;MQ0=22;MQRankSum=-4.109;QD=3.99;ReadPosRankSum=1.186;VQSLOD=2.9501;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,9:32:29.69:279,30,0	1/1:2,0:7:2.84:14,3,0	./.	./.	0/0:9,0:12:9.02:0,9,116	0/1:22,1:21:8.89:9,0,271	0/0:47,1:48:17.34:0,17,634	./.	1/1:10,9:22:17.88:179,18,0	0/1:16,3:18:68.87:69,0,234	0/1:6,1:7:23.94:24,0,77	1/1:18,13:37:35.39:307,35,0	1/1:8,5:14:15.23:148,15,0	0/0:23,0:23:5:0,5,46	0/1:16,0:23:0:0,0,0	1/1:4,0:16:11.36:57,11,0	0/1:30,2:32:67.97:68,0,487	1/1:6,0:8:2.69:14,3,0	1/1:16,0:18:14.20:70,14,0	0/1:6,0:11:0:0,0,0	./.	0/1:13,1:14:15.89:16,0,146	0/0:9,0:10:6.02:0,6,90	0/0:34,2:34:15.27:0,15,697	0/0:22,0:22:30.10:0,30,428	1/1:15,0:25:34.13:173,34,0	1/1:10,0:13:8.52:42,9,0	./.
chr10	101408414	.	AAC	A	428.96	PASS	AB=0.939;AC=21;AF=0.457;AN=46;BaseQRankSum=5.739;DP=536;FS=0.000;HRun=0;HaplotypeScore=143.4399;InbreedingCoeff=0.2762;MQ=62.88;MQ0=14;MQRankSum=-3.947;QD=1.74;ReadPosRankSum=-0.549;VQSLOD=2.4340;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:0:0,0,0	./.	./.	./.	0/1:14,2:15:25.79:26,0,38	0/0:15,0:15:3:0,3,25	0/0:14,0:18:3.47:0,3,27	0/0:17,0:17:0:0,0,0	0/0:16,0:16:12.04:0,12,170	0/0:17,0:17:3:0,3,25	0/0:12,0:12:3.01:0,3,39	1/1:23,0:23:14.68:70,15,0	1/1:29,0:29:8.52:42,9,0	1/1:15,0:15:8.52:42,9,0	0/1:20,1:21:25.81:26,0,26	1/1:18,0:18:11.32:55,11,0	0/1:24,2:26:51.58:52,0,76	1/1:11,1:12:3.01:32,3,0	./.	1/1:14,2:16:5.95:50,6,0	./.	0/0:16,0:16:3.01:0,3,44	0/0:11,0:11:2.99:0,3,23	0/0:20,0:21:15.40:0,15,292	0/1:21,1:22:17.87:26,0,18	0/0:19,0:19:0:0,0,0	1/1:4,0:4:2.98:22,3,0	1/1:12,3:15:13.92:129,14,0
chr10	101409060	.	GCTGGGCTACAGGTGGTGTCCTTATCCTTCCA	G	11602.24	PASS	AB=0.600;AC=27;AF=0.500;AN=54;BaseQRankSum=9.446;DP=540;FS=10.395;HRun=0;HaplotypeScore=342.9869;InbreedingCoeff=0.8426;MQ=73.95;MQ0=0;MQRankSum=-10.841;QD=41.73;ReadPosRankSum=5.267;VQSLOD=1.9892;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,14:22:6.02:456,6,0	1/1:0,6:6:2.83:239,3,0	0/0:26,0:25:35.77:0,36,1972	0/0:31,0:31:54.17:0,54,2674	0/0:17,0:17:33.01:0,33,3358	0/0:17,0:17:45.14:0,45,4585	0/0:25,0:25:51.16:0,51,4686	1/1:25,0:23:23.81:175,24,0	0/0:22,0:22:60.18:0,60,5749	0/0:16,0:16:39.13:0,39,3724	0/0:5,0:5:12.04:0,12,1128	1/1:6,24:30:24.08:1875,24,0	1/1:9,16:25:18.06:1434,18,0	1/1:3,28:31:21.54:1670,22,0	1/1:5,16:21:12.04:956,12,0	1/1:5,26:31:24.08:1912,24,0	0/0:29,0:29:81.28:0,81,9941	1/1:7,0:7:8.93:64,9,0	1/1:18,0:18:17.88:347,18,0	./.	1/1:16,0:16:5.92:41,6,0	0/0:14,0:14:30.10:0,30,2994	0/0:12,0:12:27.09:0,27,2328	0/0:29,0:29:75.26:0,75,9203	0/0:13,0:12:30.09:0,30,2285	0/1:4,8:12:99:286,0,408	1/1:9,18:27:12.04:956,12,0	1/1:1,6:7:15.05:1191,15,0
chr10	101409091	.	A	ACTGGGAGTCCTG	15543.36	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=8.235;DP=529;FS=9.187;HRun=0;HaplotypeScore=204.8635;InbreedingCoeff=0.5064;MQ=77.73;MQ0=0;MQRankSum=-14.405;QD=58.21;ReadPosRankSum=-0.767;VQSLOD=3.4319;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:36.12:1883,36,0	0/1:7,0:7:20.65:173,0,21	0/0:13,0:13:33.11:0,33,1036	0/0:24,0:24:56.73:0,57,1734	0/0:11,0:11:30.10:0,30,1060	0/0:20,0:20:48.16:0,48,1698	0/0:20,0:20:57.20:0,57,1888	1/1:10,0:10:24.07:1005,24,0	0/0:23,0:23:36.21:0,36,1968	0/0:28,0:28:78.26:0,78,2420	0/0:8,0:8:24.08:0,24,712	1/1:29,0:29:19.44:1491,19,0	0/1:24,0:24:13.90:1317,0,14	1/1:32,0:32:32.75:1148,33,0	0/1:19,0:19:5.95:612,0,6	0/1:33,0:33:9.52:1195,0,10	0/0:39,0:39:99:0,111,4024	1/1:1,5:6:18.06:1016,18,0	0/1:11,0:11:14.61:1172,0,15	1/1:5,2:7:15.05:912,15,0	1/1:10,1:13:15.05:838,15,0	0/0:16,0:16:48.15:0,48,1519	0/0:12,0:12:27.08:0,27,759	0/0:35,0:35:93.31:0,93,3167	0/0:13,0:12:36.11:0,36,985	0/1:18,0:18:99:1304,0,181	0/1:20,0:20:28.90:352,0,29	1/1:11,0:11:27.09:1125,27,0
chr10	101409871	.	GTT	G	3971.60	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=5.651;DP=508;FS=0.400;HRun=11;HaplotypeScore=69.1758;InbreedingCoeff=0.9958;MQ=77.23;MQ0=6;MQRankSum=-1.303;QD=23.09;ReadPosRankSum=1.508;VQSLOD=3.2880;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:27:71.04:0,71,1009	0/0:2,0:13:27.45:0,27,94	0/0:29,0:20:32.23:0,32,461	0/0:23,0:15:23.50:0,23,229	0/0:25,0:25:58.04:0,58,843	0/0:26,0:26:69.23:0,69,1056	0/0:12,0:12:28.65:0,29,420	1/1:6,18:25:54.10:567,54,0	0/0:10,0:11:29.59:0,30,424	0/0:25,0:24:60.20:0,60,924	0/0:13,0:13:33.10:0,33,478	0/0:1,0:10:24.04:0,24,230	0/0:3,0:10:24.04:0,24,247	0/0:1,0:17:34.81:0,35,120	1/1:3,19:22:51.10:543,51,0	0/0:8,0:8:24.06:0,24,348	0/0:19,0:19:45.15:0,45,678	1/1:4,11:15:24.05:255,24,0	1/1:7,18:25:54.07:563,54,0	1/1:1,24:25:66.12:690,66,0	1/1:1,9:10:18.04:192,18,0	0/0:17,0:17:45.15:0,45,692	0/0:21,0:21:60.20:0,60,922	0/0:10,0:10:27.09:0,27,416	0/0:17,0:18:47.65:0,48,701	1/1:4,13:17:39.07:415,39,0	1/1:1,17:19:50.86:523,51,0	1/1:2,12:10:21.05:224,21,0
chr10	101410631	.	TA	T	5619.25	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=10.682;DP=689;FS=0.000;HRun=11;HaplotypeScore=86.1023;InbreedingCoeff=0.9980;MQ=71.09;MQ0=0;MQRankSum=1.542;QD=18.48;ReadPosRankSum=0.532;VQSLOD=5.4744;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:27:57.08:0,57,303	0/0:11,0:11:24.03:0,24,241	0/0:17,0:16:26.70:0,27,221	0/0:12,0:12:18.55:0,19,227	0/0:30,1:31:57.37:0,57,764	0/0:29,1:31:65.40:0,65,871	0/0:16,0:16:39.06:0,39,398	1/1:7,29:36:89.80:723,90,0	0/0:24,0:24:66.13:0,66,680	0/0:29,0:29:75.17:0,75,789	0/0:17,1:19:29.33:0,29,501	1/1:4,19:24:34.81:425,35,0	1/1:5,24:30:61.96:498,62,0	0/0:30,1:31:59.51:0,60,806	1/1:2,22:24:59.93:493,60,0	0/0:3,0:21:42.68:0,43,214	0/0:22,1:23:38.48:0,38,596	1/1:2,22:25:34.83:276,35,0	1/1:1,13:14:38.91:313,39,0	1/1:1,34:35:99:793,101,0	1/1:2,16:18:41.95:345,42,0	0/0:17,0:19:23.49:0,23,378	0/0:34,0:34:93.19:0,93,968	0/0:15,0:18:47.79:0,48,476	0/0:21,1:22:41.51:0,42,639	1/1:3,27:31:82.39:649,82,0	1/1:7,37:44:89.83:739,90,0	1/1:1,22:23:43.70:367,44,0
chr10	101411321	.	T	TAAAGA	22170.57	PASS	AB=0.549;AC=24;AF=0.429;AN=56;BaseQRankSum=-2.539;DP=698;FS=0.601;HRun=0;HaplotypeScore=124.6406;InbreedingCoeff=0.8850;MQ=84.72;MQ0=0;MQRankSum=-16.643;QD=73.41;ReadPosRankSum=-1.931;VQSLOD=5.5761;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:30:66.23:2105,66,0	1/1:4,11:16:33.04:889,33,0	0/0:24,0:24:66.56:0,67,1139	0/0:27,0:27:72.19:0,72,1450	0/0:38,0:38:99:0,111,2310	0/0:30,0:30:86.72:0,87,1937	0/0:22,0:22:66.17:0,66,1323	1/1:4,31:38:99:3020,114,0	0/0:23,0:23:69.22:0,69,1493	0/0:24,0:24:66.22:0,66,1419	0/0:16,0:16:48.14:0,48,984	0/0:36,0:36:96.27:0,96,1972	0/0:25,0:25:75.17:0,75,1441	1/1:4,29:34:78.27:2505,78,0	1/1:1,19:22:54.19:1739,54,0	0/1:5,19:27:3.63:1787,0,4	0/0:37,0:36:99:0,111,2429	0/1:4,17:23:6.64:1754,0,7	1/1:3,22:25:72.21:2028,72,0	1/1:5,22:28:84.16:2382,84,0	1/1:0,14:17:33.07:984,33,0	0/0:24,0:24:69.22:0,69,1488	0/0:27,0:27:81.21:0,81,1739	0/0:34,0:34:99:0,102,2144	0/0:9,0:9:24.08:0,24,535	1/1:2,15:17:51.17:1535,51,0	1/1:6,9:16:33.11:1061,33,0	1/1:1,7:8:12.04:382,12,0
chr10	101411784	.	G	GT	2857.26	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-10.992;DP=699;FS=4.224;HRun=2;HaplotypeScore=87.9986;InbreedingCoeff=0.9996;MQ=85.24;MQ0=0;MQRankSum=-3.273;QD=38.61;ReadPosRankSum=3.863;VQSLOD=4.1682;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,41:43:99:1726,120,0	0/0:11,0:11:33.10:0,33,405	0/0:30,0:30:78.19:0,78,894	0/0:29,0:29:68.05:0,68,724	0/0:33,0:33:79.32:0,79,1136	0/0:24,0:24:72.21:0,72,880	0/0:25,0:24:69.18:0,69,809	0/0:28,0:28:78.23:0,78,948	0/0:23,0:23:63.18:0,63,768	0/0:32,0:32:81.20:0,81,968	0/0:17,0:17:45.12:0,45,541	0/0:28,0:28:84.25:0,84,1018	0/0:25,0:25:69.22:0,69,854	0/0:31,0:31:90.27:0,90,1102	0/0:25,0:25:66.16:0,66,776	1/1:0,31:31:87.29:1253,87,0	0/0:34,0:34:99:0,102,1264	0/0:17,0:17:48.12:0,48,576	0/0:12,0:12:36.09:0,36,421	0/0:13,0:13:36.10:0,36,433	0/0:40,0:40:99:0,105,1232	0/0:17,0:17:45.14:0,45,556	0/0:14,0:14:42.13:0,42,515	0/0:36,0:36:99:0,108,1327	0/0:23,0:23:69.18:0,69,820	0/0:25,0:25:54.14:0,54,646	0/0:20,0:20:54.16:0,54,656	0/0:13,0:13:33.08:0,33,409
chr10	101411792	.	A	AG	3162.07	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-3.511;DP=698;FS=1.584;HRun=8;HaplotypeScore=87.4285;InbreedingCoeff=0.9188;MQ=85.35;MQ0=0;MQRankSum=-1.765;QD=13.63;ReadPosRankSum=-2.058;VQSLOD=3.2641;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,111,973	0/0:11,0:11:24:0,24,220	0/0:29,0:29:55.67:0,56,544	0/1:31,0:31:5.07:5,0,370	0/0:33,0:33:65.57:0,66,564	0/0:23,0:25:65.19:0,65,543	0/0:23,0:23:56.90:0,57,490	1/1:9,21:30:29.70:595,30,0	0/0:20,0:20:54.03:0,54,494	0/0:24,0:24:39.01:0,39,356	0/0:16,0:17:34.88:0,35,294	0/0:24,0:24:66.02:0,66,600	0/0:22,0:22:63.03:0,63,577	0/0:32,0:32:84.01:0,84,764	1/1:0,23:23:57.17:658,57,0	0/0:33,0:33:87.04:0,87,795	0/0:34,0:36:99:0,100,886	1/1:5,10:16:29.92:326,30,0	1/1:4,1:15:37.15:212,37,0	1/1:4,2:16:23.19:161,23,0	1/1:12,2:43:68.18:346,68,0	0/0:19,0:19:39.90:0,40,359	0/0:16,0:16:35.90:0,36,318	0/0:36,0:37:89.05:0,89,797	0/0:21,1:22:17.29:0,17,406	1/1:6,15:22:50.93:534,51,0	1/1:4,1:20:42.65:217,43,0	1/1:3,13:16:5.63:319,6,0
chr10	101413355	.	CT	C	10796.64	PASS	AB=0.533;AC=19;AF=0.339;AN=56;BaseQRankSum=14.066;DP=773;FS=0.273;HRun=1;HaplotypeScore=82.2489;InbreedingCoeff=0.9154;MQ=76.80;MQ0=0;MQRankSum=-1.337;QD=38.02;ReadPosRankSum=2.812;VQSLOD=5.4310;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,153,2411	0/0:13,0:13:36.12:0,36,573	0/0:22,0:22:66.12:0,66,1024	0/0:18,0:18:48.63:0,49,766	0/0:20,0:20:57.19:0,57,911	0/0:32,0:32:96.33:0,96,1534	0/0:26,0:26:78.27:0,78,1247	1/1:0,29:29:87.27:1199,87,0	0/0:30,0:30:90.31:0,90,1439	0/0:27,0:27:81.28:0,81,1296	0/0:25,0:25:69.20:0,69,1054	0/0:32,0:32:87.29:0,87,1386	0/0:32,0:32:96.28:0,96,1441	1/1:1,46:47:99:1716,123,0	1/1:0,49:49:99:1804,129,0	0/0:40,0:40:99:0,120,1870	0/0:26,0:26:78.24:0,78,1218	0/1:2,14:16:47.79:539,0,48	1/1:0,10:10:30.08:401,30,0	1/1:0,28:28:84.28:1175,84,0	1/1:0,37:37:99:1465,105,0	0/0:17,0:17:48.15:0,48,744	0/0:23,0:23:69.22:0,69,1079	0/0:36,0:36:99:0,108,1718	0/0:19,0:19:57.19:0,57,911	1/1:2,41:43:33.85:1617,34,0	1/1:0,21:21:51.17:713,51,0	1/1:0,4:4:12.04:168,12,0
chr10	101413555	.	GACACAC	G	8256.44	PASS	AB=0.782;AC=23;AF=0.411;AN=56;BaseQRankSum=9.413;DP=672;FS=7.913;HRun=0;HaplotypeScore=156.2008;InbreedingCoeff=0.7523;MQ=61.82;MQ0=5;MQRankSum=-12.866;QD=27.89;ReadPosRankSum=1.540;VQSLOD=3.8921;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,10:21:4.13:483,4,0	0/1:12,0:11:43.40:43,0,102	0/0:33,0:15:12.50:0,13,220	0/0:22,0:16:15.51:0,16,280	0/0:21,0:22:45.15:0,45,1343	0/0:18,0:17:36.11:0,36,1067	0/0:22,1:25:48.13:0,48,1300	1/1:18,13:30:21.46:477,21,0	0/0:17,0:20:51.17:0,51,1480	0/0:26,0:26:49.70:0,50,1289	0/0:21,0:23:53.21:0,53,1577	0/0:20,0:35:33.11:0,33,869	0/0:19,0:27:30.09:0,30,737	1/1:10,25:35:59.99:1254,60,0	1/1:9,14:27:51.11:966,51,0	1/1:8,23:34:59.88:1200,60,0	0/0:20,0:26:47.42:0,47,1255	0/1:7,5:12:43.61:178,0,44	1/1:6,7:14:20.94:248,21,0	1/1:9,17:28:51:956,51,0	0/1:10,12:22:7.94:156,0,8	0/0:23,0:25:66.20:0,66,1818	0/0:20,0:20:51.18:0,51,1684	0/0:34,0:36:81.22:0,81,2289	0/0:17,0:18:38.90:0,39,1263	1/1:7,18:26:51.17:1030,51,0	1/1:5,20:27:54.18:1074,54,0	1/1:2,3:5:9.03:190,9,0
chr10	101413591	.	C	CGTAAACAA	622.79	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=3.520;DP=649;FS=1.298;HRun=0;HaplotypeScore=236.7004;InbreedingCoeff=0.6237;MQ=67.74;MQ0=4;MQRankSum=-4.630;QD=16.83;ReadPosRankSum=-2.045;VQSLOD=2.7850;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:30.10:0,30,810	1/1:3,7:10:24.04:713,24,0	0/0:38,0:19:51.09:0,51,1143	0/1:26,0:15:12.71:13,0,659	0/0:24,0:24:54.19:0,54,1320	0/0:19,0:19:48.16:0,48,1212	0/0:28,0:28:81.26:0,81,2007	0/0:41,0:41:99:0,102,2466	0/0:18,0:18:39.13:0,39,1003	0/0:23,0:22:60.21:0,60,1544	0/0:26,0:26:72.23:0,72,1785	0/0:20,0:20:21.89:0,22,347	0/0:22,0:22:23.70:0,24,423	0/0:30,0:30:69.73:0,70,1616	0/0:27,0:27:60.21:0,60,1503	0/0:29,0:28:51.13:0,51,1314	0/0:19,0:19:54.19:0,54,1373	0/0:7,0:7:12.04:0,12,319	0/0:16,0:16:33.09:0,33,694	0/0:28,0:28:54.19:0,54,1430	0/0:18,0:18:11.17:0,11,315	0/0:22,0:22:63.20:0,63,1566	0/0:19,0:19:45.15:0,45,1132	0/0:27,0:27:69.24:0,69,1699	0/0:23,0:23:60.19:0,60,1427	0/0:25,0:25:72.24:0,72,1787	0/0:31,0:31:66.23:0,66,1664	0/0:10,0:10:24.08:0,24,647
chr10	101413631	.	G	GTCTC	3558.91	PASS	AB=0.975;AC=24;AF=0.429;AN=56;BaseQRankSum=7.533;DP=659;FS=1.574;HRun=0;HaplotypeScore=177.1142;InbreedingCoeff=0.8391;MQ=64.97;MQ0=23;MQRankSum=-5.446;QD=12.23;ReadPosRankSum=-0.491;VQSLOD=2.9348;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:0:0,0,0	1/1:8,0:7:6.02:72,6,0	0/0:57,0:26:28.96:0,29,333	0/1:42,0:22:32.25:32,0,134	0/0:30,0:29:72.23:0,72,1073	0/0:25,0:25:54.18:0,54,845	0/0:32,0:33:63.14:0,63,927	1/1:43,0:42:54.65:821,55,0	0/0:14,0:14:33.10:0,33,514	0/0:17,0:17:30.10:0,30,468	0/0:24,0:24:45.14:0,45,662	0/0:12,0:13:21.04:0,21,212	0/0:24,0:24:36.05:0,36,341	0/0:23,0:23:14.62:0,15,138	1/1:22,0:22:5.62:254,6,0	1/1:23,9:32:25.50:475,25,0	0/0:21,0:21:42.01:0,42,632	1/1:6,0:5:11.42:69,11,0	1/1:12,0:12:18.06:278,18,0	1/1:23,0:23:21:290,21,0	1/1:13,0:13:9.03:136,9,0	0/0:15,0:16:8.07:0,8,334	0/0:24,0:23:48.16:0,48,757	0/0:19,0:19:48.11:0,48,678	0/0:28,0:28:66.22:0,66,1033	1/1:27,0:27:13.45:644,13,0	1/1:28,0:28:25.89:299,26,0	1/1:16,0:16:17.91:190,18,0
chr10	101413643	.	CTCTCTCTG	C	1445.36	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=3.820;DP=685;FS=0.665;HRun=0;HaplotypeScore=221.0544;InbreedingCoeff=0.6930;MQ=58.06;MQ0=25;MQRankSum=-4.668;QD=29.50;ReadPosRankSum=-0.843;VQSLOD=3.1518;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:2.79:0,3,63	0/1:8,0:7:6.92:7,0,116	0/0:53,0:22:45.08:0,45,984	0/0:37,0:17:34.34:0,34,673	0/0:35,0:34:90.28:0,90,2835	0/0:30,0:30:63.12:0,63,1965	0/0:34,0:34:87.23:0,87,2498	0/0:41,0:40:73.59:0,74,1911	0/0:18,0:18:51.16:0,51,1694	0/0:17,0:17:50.98:0,51,1407	0/0:28,0:28:60:0,60,1578	1/1:7,4:13:24.08:575,24,0	1/1:0,26:28:38.79:988,39,0	0/0:24,0:24:39.85:0,40,709	0/0:27,0:27:32.96:0,33,685	0/0:30,0:30:23.94:0,24,774	0/0:21,0:21:57.17:0,57,1835	0/0:6,0:5:12.04:0,12,264	0/0:12,0:11:18.10:0,18,606	0/0:22,0:22:32.51:0,33,715	0/0:10,0:10:9.03:0,9,225	0/0:20,0:20:51.14:0,51,1346	0/0:25,0:24:35.75:0,36,1948	0/0:25,0:24:66.20:0,66,2103	0/0:29,0:29:81.27:0,81,2708	0/0:27,0:27:34.54:0,35,1560	0/0:30,0:30:7.60:0,8,942	0/0:16,0:16:21.07:0,21,462
chr10	101413649	.	CTG	C	1834.43	PASS	AB=0.915;AC=29;AF=0.537;AN=54;BaseQRankSum=11.072;DP=673;FS=16.102;HRun=0;HaplotypeScore=156.6027;InbreedingCoeff=0.2781;MQ=56.00;MQ0=27;MQRankSum=-0.237;QD=3.88;ReadPosRankSum=-0.382;VQSLOD=1.8992;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:16:2.99:25,3,0	1/1:5,1:6:2.90:16,3,0	0/1:49,0:21:0.56:1,0,14	0/0:34,0:16:2.59:0,3,31	0/1:37,1:37:55.82:56,0,509	0/0:28,3:31:5.04:0,5,360	0/1:32,1:33:3.01:3,0,354	0/1:23,0:33:22.54:28,0,23	0/0:16,0:16:14.70:0,15,360	0/0:15,0:15:26.88:0,27,287	0/0:28,0:28:2.15:0,2,219	1/1:16,0:16:24.60:190,25,0	1/1:28,0:28:35.45:241,35,0	0/1:17,0:23:32:76,0,32	1/1:15,7:26:32.67:285,33,0	0/1:28,0:30:28.85:80,0,29	0/0:19,0:19:39.06:0,39,501	1/1:2,4:5:12.03:134,12,0	0/1:11,0:12:0.84:64,0,1	1/1:21,2:24:23.58:172,24,0	./.	0/0:19,0:19:16.91:0,17,254	0/1:26,0:25:13.02:13,0,444	0/0:27,0:26:39.04:0,39,447	0/1:28,2:30:20.14:20,0,448	1/1:21,4:26:6.91:229,7,0	1/1:20,6:28:35.29:278,35,0	1/1:8,8:16:9.03:102,9,0
chr10	101413799	.	GA	G	333.55	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.468;DP=678;FS=1.170;HRun=2;HaplotypeScore=65.1814;InbreedingCoeff=0.9994;MQ=85.31;MQ0=0;MQRankSum=-1.682;QD=27.80;ReadPosRankSum=0.437;VQSLOD=3.2439;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.23:0,75,1101	1/1:0,12:12:33.11:428,33,0	0/0:19,0:19:47.18:0,47,684	0/0:26,0:27:81.23:0,81,1122	0/0:31,0:31:84.28:0,84,1260	0/0:25,0:25:75.24:0,75,1093	0/0:24,0:24:69.21:0,69,988	0/0:38,0:38:99:0,114,1694	0/0:20,0:20:60.20:0,60,892	0/0:24,0:24:72.24:0,72,1079	0/0:20,0:20:57.19:0,57,854	0/0:23,0:23:66.22:0,66,989	0/0:32,0:32:96.32:0,96,1428	0/0:15,0:15:42.14:0,42,628	0/0:29,0:29:84.28:0,84,1258	0/0:29,0:29:84.28:0,84,1255	0/0:16,0:16:48.16:0,48,717	0/0:15,0:15:36.09:0,36,511	0/0:23,0:23:69.23:0,69,1007	0/0:31,0:31:93.31:0,93,1389	0/0:21,0:21:63.21:0,63,939	0/0:26,0:26:78.25:0,78,1143	0/0:26,0:26:72.22:0,72,1040	0/0:30,0:30:84.25:0,84,1196	0/0:26,0:26:78.26:0,78,1169	0/0:32,0:32:93.31:0,93,1370	0/0:25,0:25:69.23:0,69,1025	0/0:12,0:12:36.12:0,36,540
chr10	101416787	.	GTTT	G	974.47	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.439;DP=540;FS=16.080;HRun=12;HaplotypeScore=82.0741;InbreedingCoeff=0.9347;MQ=69.02;MQ0=1;MQRankSum=-3.407;QD=22.66;ReadPosRankSum=2.881;VQSLOD=0.8824;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:39.12:492,39,0	1/1:0,10:10:21.06:265,21,0	0/0:10,0:9:11.82:0,12,147	0/0:10,0:10:9.50:0,10,160	0/0:31,0:31:75.25:0,75,1433	0/0:21,0:25:60.18:0,60,1043	0/0:18,0:20:45.12:0,45,783	0/0:34,0:34:63.20:0,63,1147	0/0:21,0:21:51.17:0,51,983	0/0:22,0:22:54.16:0,54,968	0/0:22,0:22:57.16:0,57,1002	0/0:0,0:10:11.21:0,11,24	0/0:3,0:13:11.21:0,11,24	0/0:0,0:13:14.95:0,15,33	0/0:21,0:21:57.19:0,57,1070	1/1:1,12:13:30.02:359,30,0	0/0:30,0:32:87.24:0,87,1569	0/0:17,0:19:51.15:0,51,934	0/0:25,0:26:66:0,66,1150	0/0:19,0:24:69.16:0,69,1182	0/0:8,0:12:15.90:0,16,222	0/0:7,0:25:59.79:0,60,496	0/0:13,0:13:33.11:0,33,651	0/0:15,0:18:45.13:0,45,803	0/0:16,0:17:51.15:0,51,914	0/0:17,0:17:45.15:0,45,874	0/0:25,0:25:66.20:0,66,1184	0/0:12,0:14:39.11:0,39,717
chr10	101417861	.	CT	C	7424.95	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=12.885;DP=711;FS=1.699;HRun=10;HaplotypeScore=77.3520;InbreedingCoeff=0.9672;MQ=80.12;MQ0=0;MQRankSum=-1.646;QD=20.74;ReadPosRankSum=4.900;VQSLOD=5.5295;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,33:38:92.96:807,93,0	1/1:1,10:11:29.99:260,30,0	0/0:26,0:25:36.99:0,37,330	0/0:13,0:13:11.79:0,12,97	0/0:33,4:37:18.01:0,18,853	0/0:29,1:30:37.08:0,37,625	0/0:23,0:23:48.08:0,48,503	1/1:10,15:25:44.85:375,45,0	0/0:22,3:25:14.07:0,14,612	0/0:32,0:32:81.05:0,81,877	0/0:23,0:23:63.16:0,63,690	1/1:2,28:30:74.98:651,75,0	1/1:4,21:25:47.98:417,48,0	1/1:3,26:29:50.60:601,51,0	1/1:4,27:31:71.96:625,72,0	1/1:1,17:18:47.99:417,48,0	0/0:27,3:30:3:0,3,696	0/0:11,0:11:26.81:0,27,278	1/1:4,20:24:59.96:515,60,0	1/1:1,21:22:56.95:489,57,0	1/1:4,20:24:56.97:495,57,0	0/0:26,0:26:72.15:0,72,766	0/0:30,1:32:54.99:0,55,807	0/0:16,1:17:22.06:0,22,463	0/0:24,1:25:37.10:0,37,629	1/1:7,31:38:39.75:743,40,0	1/1:2,28:30:83.86:718,84,0	1/1:0,13:13:35.99:313,36,0
chr10	101418314	.	TA	T	1780.23	PASS	AB=0.812;AC=24;AF=0.429;AN=56;BaseQRankSum=7.502;DP=552;FS=0.854;HRun=14;HaplotypeScore=73.7145;InbreedingCoeff=0.6336;MQ=77.34;MQ0=2;MQRankSum=-0.414;QD=6.52;ReadPosRankSum=5.615;VQSLOD=2.6249;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:19.35:0,19,290	1/1:3,6:9:17.81:123,18,0	0/1:20,0:19:12.63:13,0,58	0/1:21,2:16:30.20:30,0,39	0/0:21,1:24:15.29:0,15,276	0/0:19,0:21:47.09:0,47,436	0/0:14,0:14:31.21:0,31,264	0/1:11,9:21:46.49:141,0,46	0/0:16,1:17:7.63:0,8,188	0/0:20,0:21:44.85:0,45,389	0/0:12,0:12:23.39:0,23,201	1/1:3,0:16:11.58:37,12,0	1/1:9,0:30:40.69:117,41,0	0/0:6,0:14:5.81:0,6,34	1/1:5,21:28:51.66:341,52,0	1/1:4,23:27:0.98:276,1,0	0/0:22,1:27:21.30:0,21,324	0/0:19,0:19:25.21:0,25,208	1/1:7,6:15:18:113,18,0	1/1:7,14:21:26.41:180,26,0	1/1:5,12:17:26.76:185,27,0	0/0:19,1:20:16.38:0,16,271	0/0:18,0:21:44.69:0,45,379	0/0:28,0:28:60.24:0,60,538	0/0:20,1:22:27.31:0,27,384	0/1:6,7:13:31.76:82,0,32	1/1:8,11:18:10.43:166,10,0	1/1:4,10:14:26.69:185,27,0
chr10	101419248	.	G	GA	1217.60	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.302;DP=738;FS=1.248;HRun=8;HaplotypeScore=72.4567;InbreedingCoeff=0.9974;MQ=77.26;MQ0=0;MQRankSum=-1.628;QD=22.14;ReadPosRankSum=0.606;VQSLOD=4.0848;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:99:0,105,955	0/0:8,0:8:21.01:0,21,192	0/0:21,0:21:35.50:0,35,400	0/0:17,0:17:32.96:0,33,289	0/0:28,0:28:78.04:0,78,713	0/0:33,0:33:84.01:0,84,759	0/0:23,0:23:57.01:0,57,516	0/0:26,0:26:69.01:0,69,628	0/0:22,0:22:54.02:0,54,494	0/0:29,0:29:81.04:0,81,739	0/0:29,0:29:75.04:0,75,686	1/1:6,19:25:57.12:640,57,0	1/1:3,27:30:38.73:700,39,0	0/0:36,0:36:99:0,102,933	0/0:32,0:32:75.01:0,75,680	0/0:33,0:33:96.03:0,96,873	0/0:40,0:40:99:0,102,928	0/0:27,0:27:75.03:0,75,686	0/0:21,0:21:48:0,48,436	0/0:30,0:30:75.02:0,75,686	0/0:28,0:28:72.03:0,72,659	0/0:22,0:22:54.01:0,54,489	0/0:25,0:25:60.02:0,60,549	0/0:23,0:23:59.03:0,59,570	0/0:19,0:19:51.03:0,51,467	0/0:25,0:25:71.98:0,72,647	0/0:40,0:39:93:0,93,846	0/0:10,0:10:30.02:0,30,275
chr10	101421849	.	CTT	C	4961.35	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=9.448;DP=684;FS=0.681;HRun=12;HaplotypeScore=95.4747;InbreedingCoeff=0.9700;MQ=68.83;MQ0=0;MQRankSum=-2.973;QD=23.63;ReadPosRankSum=1.883;VQSLOD=4.7717;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:54.17:0,54,784	0/0:6,0:6:18.06:0,18,269	0/0:7,0:7:10.88:0,11,90	0/0:17,0:17:4.64:0,5,122	0/0:41,0:42:99:0,111,1601	0/0:27,0:27:63.19:0,63,901	0/0:17,0:17:50.96:0,51,727	1/1:11,18:29:54.02:529,54,0	0/0:20,0:20:57.17:0,57,809	0/0:30,0:30:81.21:0,81,1104	0/0:32,0:34:92.78:0,93,1305	0/0:3,0:23:48.07:0,48,488	0/0:9,0:30:65.68:0,66,638	0/0:20,0:20:55.95:0,56,748	1/1:1,19:20:57.13:580,57,0	0/0:25,0:25:65.71:0,66,935	0/0:33,0:34:81.22:0,81,1113	0/0:12,0:14:38.54:0,39,478	1/1:3,22:27:59.53:626,60,0	1/1:3,25:29:68.83:683,69,0	1/1:4,20:26:62.61:604,63,0	0/0:20,0:21:57.19:0,57,833	0/0:27,0:28:74.72:0,75,1043	0/0:17,0:18:50.66:0,51,724	0/0:29,0:32:77.20:0,77,1033	1/1:3,32:35:96.16:962,96,0	1/1:6,19:26:59.83:591,60,0	1/1:3,14:18:32.36:387,32,0
chr10	101422368	.	G	GA	541.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.030;DP=618;FS=0.000;HRun=8;HaplotypeScore=85.3413;InbreedingCoeff=0.9899;MQ=82.33;MQ0=0;MQRankSum=-1.755;QD=22.56;ReadPosRankSum=0.245;VQSLOD=3.8681;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,126,1151	0/0:9,0:9:18:0,18,165	0/0:19,0:19:35.97:0,36,318	0/0:19,0:19:38.54:0,39,381	0/0:26,0:26:66.02:0,66,600	0/0:28,0:28:78.04:0,78,714	0/0:19,0:19:56.97:0,57,506	0/0:31,0:32:75.01:0,75,676	0/0:19,0:19:54.03:0,54,494	0/0:24,0:24:56.52:0,57,504	0/0:15,0:16:44.04:0,44,386	0/0:18,0:18:33.01:0,33,300	0/0:27,0:27:65.94:0,66,589	1/1:2,21:24:57:636,57,0	0/0:20,0:20:53.99:0,54,483	0/0:17,0:17:48:0,48,431	0/0:30,0:30:74.95:0,75,665	0/0:25,0:25:60.02:0,60,549	0/0:12,0:12:27.01:0,27,247	0/0:25,0:25:75.02:0,75,678	0/0:17,0:17:48:0,48,432	0/0:16,0:16:42.01:0,42,384	0/0:27,0:27:81.04:0,81,741	0/0:25,0:25:63.03:0,63,576	0/0:24,0:24:63.50:0,63,578	0/0:16,0:16:33.01:0,33,299	0/0:24,0:24:66.03:0,66,604	0/0:11,0:11:33.01:0,33,299
chr10	101422447	.	G	GA	1236.16	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.931;DP=548;FS=5.078;HRun=7;HaplotypeScore=71.5403;InbreedingCoeff=0.9841;MQ=80.86;MQ0=0;MQRankSum=-0.098;QD=29.43;ReadPosRankSum=1.313;VQSLOD=4.3835;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.12:0,75,724	0/0:8,0:8:18.02:0,18,174	0/0:15,0:15:36.03:0,36,338	0/0:14,0:14:14.92:0,15,136	0/0:36,0:36:99:0,108,1037	0/0:25,0:25:69.11:0,69,666	0/0:19,0:19:51.08:0,51,492	0/0:24,0:24:60.08:0,60,575	0/0:15,0:15:42.07:0,42,406	0/0:21,0:21:57.09:0,57,551	0/0:27,0:28:77.16:0,77,736	1/1:2,17:19:51.14:605,51,0	1/1:3,20:23:63.19:753,63,0	0/0:19,0:19:51.08:0,51,493	0/0:21,0:21:39.06:0,39,377	0/0:17,0:17:42.05:0,42,400	0/0:25,0:24:66.10:0,66,637	0/0:11,0:11:33:0,33,309	0/0:24,0:24:66.10:0,66,637	0/0:23,0:23:63.10:0,63,608	0/0:9,0:9:24.04:0,24,232	0/0:16,0:16:45.07:0,45,435	0/0:28,0:28:84.14:0,84,811	0/0:16,0:16:48.08:0,48,462	0/0:23,0:23:63.10:0,63,608	0/0:14,0:14:39.06:0,39,377	0/0:22,0:22:51.08:0,51,492	0/0:7,0:7:21.03:0,21,203
chr10	101423070	.	GTAA	G	284.74	PASS	AB=0.833;AC=15;AF=0.357;AN=42;BaseQRankSum=4.651;DP=248;FS=6.424;HRun=0;HaplotypeScore=35.9083;InbreedingCoeff=0.5383;MQ=72.92;MQ0=1;MQRankSum=-0.353;QD=3.65;ReadPosRankSum=0.871;VQSLOD=0.3292;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:20:25.11:33,0,25	1/1:5,0:8:2.93:20,3,0	./.	./.	0/0:8,0:8:15.05:0,15,286	1/1:6,2:9:12:135,12,0	./.	0/0:28,0:27:8.99:0,9,117	0/0:11,0:11:9.03:0,9,172	0/0:9,0:11:12.01:0,12,172	0/0:7,0:7:12.04:0,12,229	1/1:8,3:11:9.03:118,9,0	1/1:8,3:11:3.01:39,3,0	0/0:4,0:4:6.02:0,6,105	1/1:5,1:6:3.01:39,3,0	1/1:2,0:3:2.98:21,3,0	0/0:19,0:19:21.54:0,22,400	1/1:7,0:10:2.89:21,3,0	0/0:5,0:5:6.02:0,6,103	0/0:3,0:3:3.01:0,3,36	./.	./.	./.	0/0:5,0:5:6.02:0,6,115	0/0:6,0:6:12.04:0,12,229	./.	0/0:10,0:10:6.02:0,6,114	0/0:16,0:16:34.36:0,34,619
chr10	101424929	.	T	TG	802.26	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.331;DP=551;FS=0.000;HRun=1;HaplotypeScore=56.6911;InbreedingCoeff=0.9669;MQ=87.55;MQ0=0;MQRankSum=-3.342;QD=40.11;ReadPosRankSum=0.383;VQSLOD=4.0058;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.20:0,75,940	0/0:8,0:8:24.08:0,24,311	0/0:24,0:23:60.12:0,60,725	0/0:31,0:31:55.53:0,56,855	0/0:14,0:14:36.12:0,36,467	0/0:15,0:14:45.13:0,45,569	0/0:19,0:19:57.19:0,57,739	0/0:30,0:30:81.26:0,81,1051	0/0:24,0:24:69.19:0,69,866	0/0:12,0:12:36.12:0,36,467	0/0:12,0:12:33.11:0,33,427	0/0:21,0:21:63.17:0,63,774	0/0:23,0:23:66.20:0,66,839	1/1:0,20:20:60.20:897,60,0	0/0:36,0:36:99:0,105,1316	0/0:26,0:26:78.25:0,78,1011	0/0:35,0:35:93.27:0,93,1177	0/0:22,0:22:63.17:0,63,798	0/0:11,0:11:33.11:0,33,428	0/0:11,0:10:33.09:0,33,414	0/0:23,0:23:63.17:0,63,788	0/0:19,0:19:57.19:0,57,739	0/0:15,0:15:42.12:0,42,531	0/0:21,0:21:63.18:0,63,799	0/0:11,0:11:30.10:0,30,389	0/0:17,0:17:42.11:0,42,533	0/0:19,0:19:57.17:0,57,724	0/0:4,0:4:12.04:0,12,156
chr10	101425535	.	AATGG	A	2603.53	PASS	AB=0.714;AC=15;AF=0.288;AN=52;BaseQRankSum=6.808;DP=724;FS=6.902;HRun=0;HaplotypeScore=138.6253;InbreedingCoeff=0.8342;MQ=76.97;MQ0=6;MQRankSum=-0.001;QD=10.41;ReadPosRankSum=-0.544;VQSLOD=2.7405;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:64.44:0,64,1339	0/0:8,0:8:15.04:0,15,308	./.	./.	0/0:27,0:27:14.09:0,14,529	0/0:27,0:27:42.13:0,42,897	0/0:12,0:12:12.04:0,12,260	1/1:50,0:49:2.84:21,3,0	0/0:19,0:19:34:0,34,749	0/0:16,0:16:24.08:0,24,539	0/0:20,0:20:39.10:0,39,695	0/0:18,0:37:44.77:0,45,795	0/0:9,0:22:33.11:0,33,568	0/0:21,0:21:27.09:0,27,616	1/1:15,13:28:27.09:419,27,0	0/0:28,0:28:60.18:0,60,1245	0/0:35,0:34:60.18:0,60,1304	0/0:17,0:17:33.11:0,33,739	1/1:17,8:25:24.08:364,24,0	1/1:8,15:23:27.05:393,27,0	1/1:19,24:43:24.08:373,24,0	0/0:22,0:22:45.12:0,45,924	0/0:22,0:22:48.16:0,48,1057	0/0:23,0:23:30.10:0,30,684	0/0:26,0:26:42.09:0,42,706	0/1:21,14:35:25.52:568,0,26	1/1:18,18:35:35.81:559,36,0	1/1:8,2:10:4.74:91,5,0
chr10	101425879	.	C	CA	12856.71	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-15.256;DP=599;FS=4.057;HRun=0;HaplotypeScore=57.6705;InbreedingCoeff=0.9991;MQ=83.32;MQ0=0;MQRankSum=-2.185;QD=41.88;ReadPosRankSum=1.556;VQSLOD=5.5367;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:26:60.20:959,60,0	1/1:1,13:14:27.09:432,27,0	0/0:22,0:22:55.35:0,55,727	0/0:12,0:12:26.25:0,26,309	0/0:24,0:24:63.17:0,63,856	0/0:33,0:33:96.17:0,96,1257	0/0:20,0:20:60.16:0,60,817	1/1:2,25:27:78.24:1197,78,0	0/0:19,0:19:57.15:0,57,771	0/0:17,0:17:51.17:0,51,713	0/0:21,0:21:57.19:0,57,796	1/1:0,24:24:69.24:1103,69,0	1/1:0,27:27:69.24:1103,69,0	1/1:1,24:25:69.24:1103,69,0	1/1:1,18:19:54.18:863,54,0	1/1:1,20:21:57.19:911,57,0	0/0:22,0:22:66.22:0,66,917	0/0:21,0:21:63.21:0,63,880	1/1:2,27:29:81.24:1227,81,0	1/1:1,21:22:57.19:911,57,0	1/1:0,14:14:39.13:624,39,0	0/0:15,0:15:45.15:0,45,627	0/0:24,0:24:69.19:0,69,936	0/0:29,0:29:87.29:0,87,1216	0/0:13,0:13:36.09:0,36,482	1/1:1,20:21:60.19:937,60,0	1/1:0,31:30:72.25:1151,72,0	1/1:0,7:7:21.07:336,21,0
chr10	101426450	.	T	TTTG	910.68	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=6.570;DP=642;FS=2.196;HRun=0;HaplotypeScore=118.2014;InbreedingCoeff=0.4496;MQ=66.31;MQ0=1;MQRankSum=-4.596;QD=11.98;ReadPosRankSum=1.610;VQSLOD=3.1253;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:33.33:33,0,160	0/0:6,0:6:11.36:0,11,126	0/0:28,0:20:26.93:0,27,540	0/0:27,0:21:34.37:0,34,638	0/0:24,0:24:69.24:0,69,1169	0/0:30,0:30:90.29:0,90,1479	0/0:25,0:25:69.20:0,69,1097	0/0:17,0:17:28.89:0,29,409	0/0:22,0:22:54.18:0,54,891	0/0:32,0:32:96.33:0,96,1621	0/0:24,0:24:66.18:0,66,1019	0/0:13,0:12:26.50:0,26,189	0/1:22,0:21:14.95:15,0,92	1/1:5,17:26:50.95:977,51,0	0/0:22,0:22:42.71:0,43,591	0/0:19,0:19:16.21:0,16,178	0/0:29,0:29:84.22:0,84,1336	0/0:24,0:23:68.02:0,68,1090	0/0:30,0:28:68.94:0,69,857	0/0:33,0:32:86.12:0,86,1024	0/0:16,0:16:27.52:0,28,419	0/0:20,0:20:57.18:0,57,941	0/0:21,0:21:60.18:0,60,968	0/0:25,0:25:66.21:0,66,1092	0/0:20,0:20:57.17:0,57,900	0/0:25,0:25:65.83:0,66,764	0/0:27,0:27:68.97:0,69,762	0/0:7,0:7:17.96:0,18,165
chr10	101427327	.	CCT	C	100.83	PASS	AB=0.877;AC=12;AF=0.214;AN=56;BaseQRankSum=9.191;DP=402;FS=6.711;HRun=0;HaplotypeScore=180.5366;InbreedingCoeff=-0.2435;MQ=48.60;MQ0=3;MQRankSum=-7.202;QD=0.72;ReadPosRankSum=1.035;VQSLOD=2.2852;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,2:25:16.88:0,17,930	0/1:9,0:9:1.77:2,0,183	0/0:16,0:6:21.07:0,21,373	0/0:20,0:11:24.87:0,25,370	0/0:16,1:17:26.69:0,27,462	0/1:17,2:18:37.50:37,0,408	0/1:11,3:13:28.33:28,0,234	0/0:21,1:20:11.31:0,11,488	0/1:11,1:12:1.78:2,0,477	0/1:9,1:10:1.34:1,0,379	0/0:8,1:9:3.49:0,3,273	0/1:10,3:13:19.37:19,0,259	0/0:12,1:13:1.98:0,2,375	0/1:8,0:8:29.77:30,0,101	0/0:22,1:23:25.01:0,25,764	0/0:17,3:19:5.96:0,6,636	0/0:6,1:7:15.05:0,15,289	0/0:4,0:4:12.01:0,12,196	0/0:15,2:17:6.89:0,7,398	0/0:11,2:13:18.84:0,19,280	0/0:17,1:18:20.34:0,20,382	0/1:13,5:18:26.62:27,0,364	0/1:7,3:10:0.83:1,0,205	0/0:14,0:14:18.45:0,18,350	0/1:8,2:9:1.24:1,0,172	0/0:20,2:22:6.20:0,6,831	0/1:11,5:16:72.64:73,0,373	0/1:2,0:2:1.64:2,0,53
chr10	101427331	.	CT	C	260.25	PASS	AB=0.862;AC=6;AF=0.107;AN=56;BaseQRankSum=8.407;DP=473;FS=119.486;HRun=1;HaplotypeScore=200.1018;InbreedingCoeff=-0.1430;MQ=48.44;MQ0=5;MQRankSum=-8.034;QD=2.86;ReadPosRankSum=-0.721;VQSLOD=0.0188;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:30:59.24:0,59,947	0/1:13,2:15:22.57:23,0,210	0/0:19,0:6:21.07:0,21,312	0/0:22,2:13:29.01:0,29,335	0/0:21,1:22:27.09:0,27,424	0/1:19,1:20:50.64:51,0,389	0/0:16,1:15:11.55:0,12,230	0/1:14,9:21:99:186,0,385	0/0:12,0:12:30.65:0,31,444	0/0:10,1:11:19.57:0,20,340	0/0:10,0:10:11.55:0,12,234	0/0:15,0:15:20.51:0,21,282	0/0:16,0:15:23.46:0,23,347	0/0:9,0:9:10.07:0,10,170	0/0:21,3:24:2.76:0,3,668	0/0:22,1:22:41.48:0,41,641	0/0:10,0:10:9.74:0,10,263	0/0:4,0:4:12.04:0,12,191	0/1:13,6:19:99:103,0,353	0/0:13,2:15:24.58:0,25,315	0/0:25,1:26:11.13:0,11,324	0/0:18,1:19:0.02:0,0,358	0/0:10,0:10:17.01:0,17,218	0/0:20,0:19:23.27:0,23,357	0/1:10,2:11:6.54:7,0,160	0/0:26,2:28:28.22:0,28,847	0/0:18,0:18:23.29:0,23,422	0/1:2,0:2:6.93:7,0,42
chr10	101427334	.	CT	C	312.55	PASS	AB=0.901;AC=12;AF=0.214;AN=56;BaseQRankSum=10.159;DP=495;FS=124.388;HRun=1;HaplotypeScore=206.7855;InbreedingCoeff=-0.2658;MQ=49.64;MQ0=6;MQRankSum=-7.234;QD=1.63;ReadPosRankSum=0.165;VQSLOD=-0.4351;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:34:56.05:0,56,1097	0/1:15,0:15:7.75:8,0,203	0/0:21,0:7:21.05:0,21,308	0/0:24,0:13:28.85:0,29,338	0/0:23,1:24:27.09:0,27,403	0/1:18,2:19:99:131,0,365	0/1:19,0:17:0.64:1,0,258	0/1:26,1:23:78:78,0,435	0/0:12,1:13:25.22:0,25,431	0/1:11,0:11:12.34:12,0,326	0/0:9,1:10:11.55:0,12,233	0/0:17,0:17:13.04:0,13,330	0/0:16,0:15:29.65:0,30,406	0/1:7,2:9:2.41:2,0,177	0/0:25,0:25:3.94:0,4,736	0/0:20,1:20:7.46:0,7,588	0/1:9,2:11:33.37:33,0,279	0/0:4,0:4:12.04:0,12,184	0/1:18,1:18:70.09:70,0,368	0/0:14,0:14:21.67:0,22,336	0/1:25,2:27:13.36:13,0,333	0/1:15,5:20:19.48:19,0,345	0/0:9,1:10:17.75:0,18,229	0/0:22,0:21:28.21:0,28,372	0/1:11,1:11:48.58:49,0,164	0/0:29,0:29:25.32:0,25,927	0/0:17,1:18:6.37:0,6,419	0/1:1,1:2:35.38:35,0,42
chr10	101427356	.	C	CT	9743.72	PASS	AB=0.933;AC=54;AF=0.964;AN=56;BaseQRankSum=-5.629;DP=612;FS=26.138;HRun=2;HaplotypeScore=239.5131;InbreedingCoeff=-0.0487;MQ=52.55;MQ0=6;MQRankSum=1.777;QD=15.92;ReadPosRankSum=4.038;VQSLOD=1.8984;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:42:97.82:902,98,0	1/1:18,0:18:19.72:227,20,0	0/1:22,4:15:14.88:110,0,15	0/1:32,0:21:99:100,0,129	1/1:26,0:25:35.93:303,36,0	1/1:26,0:25:50.78:550,51,0	1/1:25,0:23:51.36:407,51,0	1/1:30,0:28:58.54:424,59,0	1/1:16,0:16:2.13:220,2,0	1/1:15,0:15:41.51:296,42,0	1/1:17,0:16:32.88:276,33,0	1/1:20,0:18:48.02:391,48,0	1/1:17,0:16:7.46:213,7,0	1/1:14,0:14:28.13:342,28,0	1/1:29,0:29:66.24:559,66,0	1/1:24,0:23:65.84:549,66,0	1/1:16,1:17:44.90:396,45,0	1/1:8,0:8:23.96:207,24,0	1/1:17,0:14:22.48:248,22,0	1/1:19,0:19:24.97:274,25,0	1/1:31,0:31:25.53:449,26,0	1/1:22,0:22:47.95:368,48,0	1/1:15,0:16:29.19:225,29,0	1/1:26,0:25:35.79:308,36,0	1/1:14,0:13:20.49:199,20,0	1/1:32,0:31:66.39:596,66,0	1/1:27,0:27:50.69:495,51,0	1/1:4,0:4:12.01:110,12,0
chr10	101427357	.	T	TC	19010.78	PASS	AB=0.864;AC=54;AF=0.964;AN=56;BaseQRankSum=-4.421;DP=599;FS=9.902;HRun=2;HaplotypeScore=182.7630;InbreedingCoeff=-0.0367;MQ=53.56;MQ0=6;MQRankSum=0.805;QD=31.74;ReadPosRankSum=3.695;VQSLOD=3.0975;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:41:99:1726,114,0	1/1:1,11:18:34.30:512,34,0	0/1:21,2:16:7.80:305,0,8	0/1:24,8:21:99:339,0,171	1/1:2,21:25:36.12:572,36,0	1/1:2,21:23:71.98:1043,72,0	1/1:2,15:22:55.24:751,55,0	1/1:6,23:27:75:992,75,0	1/1:0,12:13:15.95:497,16,0	1/1:1,12:15:45.11:658,45,0	1/1:0,16:16:33.11:519,33,0	1/1:4,14:17:51.01:697,51,0	1/1:1,13:16:26.48:433,26,0	1/1:2,10:13:29.10:504,29,0	1/1:0,27:29:74.75:1084,75,0	1/1:1,20:23:66.68:1008,67,0	1/1:1,16:17:45.15:684,45,0	1/1:0,10:10:24.08:381,24,0	1/1:7,12:16:31.06:545,31,0	1/1:4,14:19:27.89:570,28,0	1/1:1,27:29:35.97:820,36,0	1/1:3,17:22:50.91:705,51,0	1/1:1,13:16:34.20:447,34,0	1/1:2,22:25:39.02:590,39,0	1/1:1,10:13:28.44:439,28,0	1/1:5,24:29:77.24:1129,77,0	1/1:2,22:26:58.64:875,59,0	1/1:1,4:5:10.12:186,10,0
chr10	101427682	.	A	ATC	704.43	PASS	AB=0.956;AC=21;AF=0.375;AN=56;BaseQRankSum=1.122;DP=694;FS=11.044;HRun=0;HaplotypeScore=106.3784;InbreedingCoeff=-0.0551;MQ=72.07;MQ0=12;MQRankSum=0.659;QD=1.60;ReadPosRankSum=-1.003;VQSLOD=1.2900;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:61,0:61:47.60:48,0,269	0/0:12,0:12:9.02:0,9,98	0/1:47,0:30:0:0,0,0	0/1:37,0:15:0:0,0,0	0/1:26,0:28:6.08:6,0,113	0/0:28,0:29:13.63:0,14,302	0/1:16,3:18:62.64:63,0,202	0/0:32,0:32:6.02:0,6,65	0/0:22,0:22:28.61:0,29,294	0/1:20,0:18:23.76:156,0,24	0/1:12,1:12:26.88:39,0,27	0/0:25,0:26:6.83:0,7,145	0/0:25,0:26:0.13:0,0,192	0/1:13,11:22:26.83:39,0,27	1/1:21,0:18:8.58:172,9,0	0/0:12,0:12:12.03:0,12,130	0/0:26,0:26:33.09:0,33,361	0/0:24,0:24:22.64:0,23,235	1/1:29,0:27:5.84:47,6,0	0/1:32,0:32:41.82:42,0,97	1/1:13,0:13:2.37:8,2,0	0/0:14,0:14:0.06:0,0,171	0/1:18,1:19:22.64:23,0,161	0/0:28,0:29:5.50:0,6,467	0/1:12,0:12:17.29:17,0,34	1/1:22,0:19:1.86:69,2,0	0/1:27,0:27:4.03:67,0,4	0/1:15,0:15:23.80:60,0,24
chr10	101427719	.	T	TCTCG	1702.25	PASS	AB=0.586;AC=19;AF=0.339;AN=56;BaseQRankSum=1.921;DP=594;FS=19.880;HRun=0;HaplotypeScore=115.0313;InbreedingCoeff=0.6933;MQ=59.58;MQ0=22;MQRankSum=1.276;QD=7.47;ReadPosRankSum=-0.453;VQSLOD=1.3914;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:47,0:50:71.89:860,72,0	1/1:11,0:11:8.99:75,9,0	0/0:13,0:7:16.33:0,16,135	0/0:14,0:8:1.72:0,2,27	0/0:25,0:23:32.89:0,33,329	0/0:35,0:33:59.65:0,60,585	0/0:22,0:20:24.80:0,25,202	1/1:26,0:20:20.89:163,21,0	0/0:22,0:22:41.98:0,42,417	0/0:19,0:17:15.50:0,15,148	0/0:14,0:13:16.72:0,17,148	0/0:13,0:30:9.01:0,9,84	0/0:22,0:25:53.81:0,54,447	0/0:24,0:21:24.33:0,24,223	0/1:2,0:16:7.44:102,0,7	1/1:8,0:8:8.96:69,9,0	0/0:25,0:25:45.02:0,45,512	0/0:19,0:18:29.98:0,30,294	1/1:16,0:15:17.93:190,18,0	1/1:17,16:32:11.49:180,11,0	1/1:7,0:3:5.91:38,6,0	0/0:19,0:18:35.75:0,36,355	0/0:18,0:18:29.18:0,29,274	0/0:28,0:28:46.61:0,47,531	0/0:12,0:12:14.96:0,15,145	1/1:5,0:14:17.87:143,18,0	0/1:7,0:24:11.97:39,0,12	0/1:5,0:10:11.74:41,0,12
chr10	101428339	.	TA	T	956.60	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.370;DP=691;FS=1.538;HRun=2;HaplotypeScore=68.7495;InbreedingCoeff=0.9937;MQ=83.74;MQ0=0;MQRankSum=-2.237;QD=29.89;ReadPosRankSum=-0.582;VQSLOD=3.0262;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.25:0,75,1124	0/0:8,0:8:24.08:0,24,358	0/0:23,0:23:69.23:0,69,1034	0/0:18,0:18:42.46:0,42,666	0/0:22,0:22:66.22:0,66,989	0/0:30,0:30:90.30:0,90,1349	0/0:27,0:27:78.26:0,78,1167	0/0:25,0:25:72.24:0,72,1078	0/0:33,0:33:99:0,99,1483	0/0:33,0:33:99:0,99,1472	0/0:26,0:26:78.25:0,78,1148	0/0:31,0:31:93.32:0,93,1393	0/0:27,0:27:78.26:0,78,1169	1/1:1,31:32:81.26:1051,81,0	0/0:26,0:26:75.24:0,75,1103	0/0:27,0:27:81.25:0,81,1174	0/0:24,0:24:69.22:0,69,1014	0/0:13,0:13:33.11:0,33,492	0/0:18,0:18:51.17:0,51,763	0/0:25,0:25:75.25:0,75,1123	0/0:21,0:21:60.20:0,60,897	0/0:29,0:29:87.29:0,87,1286	0/0:27,0:27:78.25:0,78,1147	0/0:27,0:27:81.27:0,81,1214	0/0:23,0:23:69.20:0,69,991	0/0:41,0:41:99:0,123,1827	0/0:23,0:23:69.22:0,69,1014	0/0:7,0:7:21.05:0,21,294
chr10	101428709	.	GTTTTAGTT	G	3688.86	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.821;DP=642;FS=3.559;HRun=0;HaplotypeScore=170.2858;InbreedingCoeff=0.9997;MQ=85.23;MQ0=1;MQRankSum=-10.588;QD=57.64;ReadPosRankSum=1.953;VQSLOD=3.6461;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,23:29:56.56:1501,57,0	1/1:1,15:16:33.11:897,33,0	0/0:26,0:27:69.20:0,69,2451	0/0:31,0:26:69.07:0,69,2192	0/0:18,0:18:54.19:0,54,2343	0/0:34,0:34:99:0,102,4249	0/0:23,0:23:69.22:0,69,2712	0/0:22,0:22:54.19:0,54,2043	0/0:16,0:16:42.14:0,42,1879	0/0:30,0:30:84.12:0,84,3471	0/0:21,0:21:63.22:0,63,2634	0/0:17,0:17:48.16:0,48,1983	0/0:27,0:27:81.28:0,81,3473	0/0:26,0:26:72.25:0,72,3140	0/0:22,0:22:66.23:0,66,2760	1/1:3,15:19:45.15:1291,45,0	0/0:17,0:17:51.13:0,51,1934	0/0:16,0:16:45.12:0,45,1792	0/0:31,0:31:93.32:0,93,3788	0/0:25,0:25:75.26:0,75,3218	0/0:18,0:18:54.17:0,54,2238	0/0:20,0:20:60.21:0,60,2523	0/0:17,0:17:51.18:0,51,2188	0/0:19,0:19:51.18:0,51,2163	0/0:36,0:36:99:0,108,4535	0/0:28,0:28:84.29:0,84,3392	0/0:27,0:27:78.24:0,78,3169	0/0:10,0:10:30.10:0,30,1317
chr10	101428839	.	TA	T	534.45	PASS	AB=0.850;AC=5;AF=0.089;AN=56;BaseQRankSum=5.711;DP=512;FS=1.512;HRun=10;HaplotypeScore=68.5316;InbreedingCoeff=0.7449;MQ=65.34;MQ0=0;MQRankSum=1.600;QD=10.91;ReadPosRankSum=2.719;VQSLOD=2.9955;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:56.95:0,57,598	0/0:7,0:7:18.05:0,18,197	0/0:7,0:7:15.04:0,15,165	0/0:6,0:5:11.24:0,11,103	0/0:27,0:27:66.18:0,66,730	0/0:32,0:32:84.23:0,84,929	0/0:15,0:15:39.11:0,39,431	0/0:30,0:30:63.17:0,63,694	0/0:10,0:10:24.01:0,24,244	0/0:22,0:22:54.14:0,54,591	0/0:24,1:25:34.21:0,34,604	1/1:1,12:13:26.99:234,27,0	1/1:2,17:19:44.98:390,45,0	0/0:17,1:18:15.99:0,16,374	0/0:23,0:23:57.11:0,57,617	0/0:24,0:24:57.15:0,57,630	0/0:26,0:26:66.16:0,66,721	0/1:14,3:17:39.05:39,0,292	0/0:11,0:12:26.56:0,27,274	0/0:18,0:18:45.11:0,45,490	0/0:7,0:7:15.04:0,15,166	0/0:16,0:16:30.08:0,30,332	0/0:20,0:20:39.08:0,39,420	0/0:13,0:13:30.08:0,30,332	0/0:23,0:23:63.17:0,63,697	0/0:19,1:19:22.07:0,22,465	0/0:31,0:30:84.18:0,84,901	0/0:6,0:6:18.05:0,18,199
chr10	101429109	.	G	GATATATGGAAA	3665.24	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.990;DP=616;FS=7.284;HRun=0;HaplotypeScore=184.6457;InbreedingCoeff=0.9961;MQ=75.28;MQ0=0;MQRankSum=-7.919;QD=130.90;ReadPosRankSum=2.604;VQSLOD=4.1134;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.22:0,63,2165	0/0:10,0:10:27.09:0,27,851	0/0:9,0:9:24.08:0,24,652	0/0:14,0:14:33.11:0,33,890	0/0:29,0:29:78.27:0,78,2571	0/0:24,0:24:69.24:0,69,2375	0/0:16,0:16:45.15:0,45,1374	0/0:36,0:36:99:0,102,3073	0/0:20,0:20:60.21:0,60,2068	0/0:36,0:36:99:0,105,3392	0/0:24,0:24:69.21:0,69,2039	0/0:12,0:12:33.11:0,33,1053	0/0:24,0:24:66.21:0,66,2186	1/1:3,24:28:66.23:3665,66,0	0/0:28,0:28:81.25:0,81,2554	0/0:26,0:26:78.27:0,78,2508	0/0:20,0:20:60.19:0,60,1968	0/0:16,0:16:45.15:0,45,1460	0/0:26,0:26:75.25:0,75,2182	0/0:26,0:26:75.26:0,75,2407	0/0:16,0:16:48.16:0,48,1537	0/0:23,0:23:63.20:0,63,2085	0/0:13,0:13:39.13:0,39,1376	0/0:26,0:26:72.23:0,72,2352	0/0:23,0:22:69.24:0,69,2357	0/0:34,0:34:99:0,102,3318	0/0:22,0:22:66.22:0,66,2124	0/0:13,0:12:33.11:0,33,1165
chr10	101430863	.	CTT	C	3134.46	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.696;DP=608;FS=2.946;HRun=10;HaplotypeScore=83.9389;InbreedingCoeff=0.9488;MQ=74.80;MQ0=3;MQRankSum=2.209;QD=25.48;ReadPosRankSum=1.682;VQSLOD=3.8171;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,34:37:73.95:1013,74,0	1/1:0,6:6:12.03:134,12,0	0/0:30,0:18:36.91:0,37,295	0/0:44,0:24:16.57:0,17,269	0/0:35,0:35:96.24:0,96,1439	0/0:20,0:20:60.18:0,60,910	0/0:9,0:11:27.09:0,27,410	0/0:28,0:28:65.78:0,66,1011	0/0:16,0:16:45.14:0,45,688	0/0:27,0:28:80.75:0,81,1221	0/0:23,1:26:32.26:0,32,909	1/1:5,18:23:48.12:535,48,0	1/1:1,24:25:66.18:735,66,0	1/1:2,11:13:30.08:334,30,0	0/0:18,0:18:42.13:0,42,637	1/1:0,19:19:51.14:569,51,0	0/0:25,0:25:71.26:0,71,1075	0/0:16,0:16:42.11:0,42,635	0/0:27,0:27:72.25:0,72,1132	0/0:32,0:33:89.79:0,90,1377	0/0:2,0:2:6.02:0,6,95	0/0:2,0:2:6.02:0,6,95	0/0:20,0:20:57.19:0,57,900	0/0:16,0:16:42.14:0,42,667	0/0:17,0:17:48.16:0,48,762	0/0:23,0:23:57.19:0,57,903	0/0:33,0:32:84.29:0,84,1333	0/0:11,0:13:20.56:0,21,283
chr10	101431355	.	CTGTGTGTGTGTG	C	1637.91	PASS	AB=0.719;AC=5;AF=0.089;AN=56;BaseQRankSum=2.207;DP=636;FS=1.967;HRun=0;HaplotypeScore=229.6418;InbreedingCoeff=0.6217;MQ=61.49;MQ0=18;MQRankSum=-5.576;QD=30.33;ReadPosRankSum=3.688;VQSLOD=2.6433;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,9:24:21.07:713,21,0	1/1:1,5:6:6.02:210,6,0	0/0:29,0:17:9.03:0,9,298	0/0:23,0:12:12.01:0,12,294	0/0:17,0:19:33.11:0,33,1564	0/0:26,0:26:54.14:0,54,2262	0/0:17,0:19:36.59:0,37,1747	0/0:41,0:39:54.18:0,54,2338	0/0:10,0:12:27.09:0,27,1403	0/0:26,0:26:54.19:0,54,2913	0/0:17,0:18:33.10:0,33,1536	0/0:14,0:22:18.06:0,18,682	0/0:16,0:26:24.08:0,24,1108	0/0:21,0:21:6.31:0,6,315	0/0:25,0:25:40.02:0,40,1819	0/1:14,7:23:99:834,0,132	0/0:22,0:24:60.21:0,60,3328	0/0:14,0:15:36.12:0,36,1872	0/0:27,0:25:24.08:0,24,889	0/0:26,0:25:27.09:0,27,1344	0/0:15,0:13:12.04:0,12,472	0/0:24,0:24:48.16:0,48,2217	0/0:16,0:21:26.83:0,27,1205	0/0:28,0:30:72.25:0,72,3606	0/0:15,0:16:27.09:0,27,1508	0/0:29,0:29:69.24:0,69,3242	0/0:37,0:34:54.19:0,54,2732	0/0:9,0:9:6.02:0,6,83
chr10	101431359	.	G	GTC	3424.10	PASS	AB=0.890;AC=10;AF=0.179;AN=56;BaseQRankSum=2.659;DP=629;FS=26.497;HRun=0;HaplotypeScore=125.4412;InbreedingCoeff=0.2817;MQ=56.20;MQ0=19;MQRankSum=-6.140;QD=16.54;ReadPosRankSum=0.051;VQSLOD=1.2855;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:38.70:0,39,276	0/0:6,0:6:8.93:0,9,63	0/0:27,0:15:38.09:0,38,427	0/0:21,0:9:14.11:0,14,165	0/0:20,0:20:51:0,51,539	0/0:26,0:26:68.20:0,68,676	0/0:19,0:19:44.98:0,45,507	0/1:40,0:38:99:540,0,183	0/0:11,0:11:33.02:0,33,392	0/0:29,0:29:74.42:0,74,857	0/0:15,0:15:45.01:0,45,529	0/0:21,0:21:6.94:0,7,131	0/0:23,0:23:0.84:0,1,153	0/0:21,0:21:22.93:0,23,179	1/1:13,13:26:48.02:551,48,0	0/0:21,0:21:44.66:0,45,344	0/0:25,0:25:65.55:0,66,810	0/0:16,0:16:47.89:0,48,573	0/1:23,1:21:36.97:339,0,37	1/1:18,8:25:23.26:455,23,0	0/1:14,2:14:9.37:111,0,9	0/0:27,0:27:62.96:0,63,660	0/0:25,0:23:44.84:0,45,448	0/0:31,0:31:77.64:0,78,919	0/0:14,0:14:33.05:0,33,419	0/1:17,11:28:45.07:641,0,45	0/1:26,11:33:28.88:690,0,29	0/1:10,0:10:4.42:97,0,4
chr10	101431381	.	G	GTGTC	3516.51	PASS	AB=0.946;AC=14;AF=0.250;AN=56;BaseQRankSum=4.703;DP=573;FS=29.818;HRun=0;HaplotypeScore=140.7943;InbreedingCoeff=0.3909;MQ=51.68;MQ0=24;MQRankSum=-3.254;QD=16.43;ReadPosRankSum=1.834;VQSLOD=1.4280;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:29.93:0,30,275	0/0:6,0:6:9.01:0,9,87	0/0:35,0:10:6.71:0,7,206	0/0:28,0:15:32.14:0,32,339	0/0:18,0:18:45.03:0,45,552	0/0:20,0:20:42.03:0,42,536	0/0:21,0:21:48.06:0,48,638	0/1:29,0:28:39.55:277,0,40	0/0:11,0:11:33.07:0,33,476	0/0:24,0:24:69.07:0,69,930	0/0:10,0:10:30.09:0,30,506	0/1:18,0:18:36.90:58,0,37	0/1:18,0:18:81.77:114,0,82	0/0:18,0:18:9.78:0,10,75	1/1:13,8:24:19.48:697,19,0	0/0:18,0:18:45.05:0,45,459	0/0:27,0:27:77.43:0,77,1080	0/0:15,0:15:39.06:0,39,623	1/1:15,1:14:5.67:249,6,0	1/1:13,6:20:21.53:385,22,0	0/1:15,1:12:12.97:86,0,13	0/0:24,0:24:53.83:0,54,624	0/0:22,0:20:38.88:0,39,441	0/0:32,0:32:77.55:0,78,1091	0/0:13,0:13:33.07:0,33,506	0/1:18,8:28:16.32:835,0,16	1/1:27,11:33:21.52:805,22,0	0/1:6,0:6:12.03:12,0,14
chr10	101431434	.	G	GA	1560.48	PASS	AB=0.690;AC=7;AF=0.125;AN=56;BaseQRankSum=1.258;DP=599;FS=8.346;HRun=1;HaplotypeScore=107.7838;InbreedingCoeff=-0.1575;MQ=47.89;MQ0=32;MQRankSum=-4.098;QD=8.77;ReadPosRankSum=0.754;VQSLOD=0.6735;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:24.95:0,25,269	0/0:8,0:8:11.72:0,12,152	0/0:21,0:6:9.03:0,9,109	0/0:36,0:7:10.24:0,10,148	0/0:16,0:16:39.12:0,39,493	0/0:16,0:15:33.04:0,33,400	0/0:25,0:25:44.84:0,45,541	0/1:20,14:30:99:402,0,401	0/0:20,0:20:44.99:0,45,570	0/0:16,0:16:45.09:0,45,554	0/0:12,0:12:27.09:0,27,346	0/0:19,0:19:14.89:0,15,191	0/0:14,0:14:23.55:0,24,271	0/0:20,0:20:40:0,40,488	0/1:13,9:21:61.74:90,0,62	0/0:29,0:28:51.90:0,52,560	0/0:25,0:25:69.22:0,69,878	0/0:15,0:14:39.08:0,39,478	0/1:14,11:24:99:332,0,376	0/1:10,8:18:26.48:47,0,26	0/0:10,3:10:2.84:0,3,38	0/0:13,0:13:28.80:0,29,348	0/0:24,0:22:38.99:0,39,496	0/0:30,0:30:61.04:0,61,738	0/0:14,0:14:32.97:0,33,384	0/1:14,11:24:99:371,0,210	0/1:20,21:36:99:307,0,317	0/1:6,6:10:99:141,0,128
chr10	101431839	.	T	TTA	13384.95	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-15.605;DP=590;FS=6.165;HRun=0;HaplotypeScore=88.3535;InbreedingCoeff=0.9908;MQ=96.48;MQ0=1;MQRankSum=-0.291;QD=45.22;ReadPosRankSum=2.181;VQSLOD=6.3320;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:63.22:1154,63,0	1/1:1,4:5:12.04:220,12,0	0/0:35,0:34:53.15:0,53,542	0/0:29,0:29:32.08:0,32,346	0/0:29,0:29:87.26:0,87,1203	0/0:19,0:19:50.96:0,51,730	0/0:9,0:9:21.07:0,21,300	1/1:2,25:27:78.20:1294,78,0	0/0:24,0:24:69.19:0,69,922	0/0:18,0:18:54.16:0,54,738	0/0:25,0:25:72.24:0,72,1032	1/1:0,18:19:48.16:880,48,0	1/1:0,18:19:42.14:769,42,0	1/1:1,15:16:39.13:715,39,0	1/1:0,17:17:42.14:770,42,0	1/1:0,23:24:69.24:1265,69,0	0/0:28,0:28:81.27:0,81,1159	0/0:12,0:12:36.12:0,36,516	1/1:5,33:38:99:1772,105,0	1/1:0,21:20:54.19:989,54,0	1/1:2,5:6:12.04:220,12,0	0/0:10,0:10:27.09:0,27,386	0/0:17,0:17:48.07:0,48,633	0/0:11,0:11:33.11:0,33,467	0/0:28,0:28:78.26:0,78,1117	1/1:1,20:22:60.21:1082,60,0	1/1:2,36:37:87.30:1595,87,0	1/1:0,18:18:36.12:660,36,0
chr10	101432581	.	T	TA	11372.02	PASS	AB=0.529;AC=27;AF=0.482;AN=56;BaseQRankSum=9.361;DP=614;FS=1.319;HRun=0;HaplotypeScore=80.7933;InbreedingCoeff=0.9362;MQ=70.47;MQ0=0;MQRankSum=-1.218;QD=35.21;ReadPosRankSum=3.923;VQSLOD=4.4712;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,43:44:99:1632,120,0	1/1:2,10:12:18.75:355,19,0	0/0:12,0:11:26.86:0,27,300	0/0:13,0:12:33.04:0,33,402	0/0:34,0:34:99:0,99,1259	0/0:19,0:19:57.11:0,57,684	0/0:26,0:26:78.16:0,78,1000	1/1:2,31:33:93.20:1166,93,0	0/0:17,0:17:51.13:0,51,649	0/0:33,0:33:99:0,99,1295	0/0:21,0:21:63.15:0,63,786	1/1:0,19:20:45.15:607,45,0	1/1:0,15:15:39.13:525,39,0	1/1:1,33:34:81.26:1101,81,0	1/1:0,15:15:42.14:572,42,0	1/1:0,18:18:45.15:613,45,0	0/0:24,0:24:69.04:0,69,895	0/0:15,0:15:42.14:0,42,584	1/1:0,27:27:81.22:1026,81,0	1/1:0,27:27:75.16:994,75,0	1/1:0,17:17:42.14:572,42,0	0/0:19,0:19:54.17:0,54,735	0/0:13,0:13:39.05:0,39,474	0/0:28,0:28:79.03:0,79,1079	0/0:17,0:17:51.12:0,51,619	0/1:3,24:27:8.50:865,0,8	1/1:0,21:21:63.21:856,63,0	1/1:1,12:13:36.11:488,36,0
chr10	101433815	.	CTT	C	3570.39	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=12.449;DP=527;FS=16.139;HRun=3;HaplotypeScore=117.1798;InbreedingCoeff=0.9404;MQ=71.78;MQ0=4;MQRankSum=-9.925;QD=16.01;ReadPosRankSum=-0.131;VQSLOD=-0.0508;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:8:1.82:5,2,0	1/1:7,2:9:13.64:121,14,0	0/0:33,0:25:46.21:0,46,1178	0/0:33,0:25:63.16:0,63,1009	0/0:19,0:19:54.19:0,54,1035	0/0:23,0:23:69.18:0,69,1225	0/0:22,0:22:66.21:0,66,1209	1/1:5,13:16:38.83:448,39,0	0/0:24,0:24:69.18:0,69,1256	0/0:26,0:26:78.21:0,78,1404	0/0:14,0:14:42.06:0,42,695	1/1:21,3:24:28.73:262,29,0	1/1:10,2:12:30.36:257,30,0	1/1:13,4:17:9.81:242,10,0	1/1:19,4:22:9.01:97,9,0	1/1:13,5:18:22.86:280,23,0	0/0:17,0:17:45.06:0,45,762	0/0:23,0:23:66.17:0,66,1170	1/1:14,6:20:18.52:391,19,0	1/1:9,2:11:16.80:154,17,0	1/1:4,4:8:11.65:162,12,0	0/0:15,0:15:45.15:0,45,839	0/0:13,0:13:39.13:0,39,714	0/0:22,0:21:54.16:0,54,967	0/0:20,0:20:60.08:0,60,929	1/1:23,3:26:7.87:623,8,0	1/1:13,4:17:41.37:359,41,0	1/1:9,1:10:24.53:171,25,0
chr10	101433845	.	G	GTC	721.99	PASS	AB=0.824;AC=15;AF=0.278;AN=54;BaseQRankSum=8.049;DP=450;FS=0.000;HRun=0;HaplotypeScore=95.6979;InbreedingCoeff=0.6647;MQ=50.71;MQ0=25;MQRankSum=-7.525;QD=7.76;ReadPosRankSum=-0.564;VQSLOD=3.0481;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:6:0:0,0,0	1/1:6,0:6:4.47:23,4,0	0/0:13,0:8:11.71:0,12,124	0/0:13,0:9:5.91:0,6,48	0/0:17,0:16:45.13:0,45,581	0/0:26,0:26:69.20:0,69,886	0/0:22,0:20:51.07:0,51,625	1/1:9,0:3:3.01:46,3,0	0/0:25,0:24:66.14:0,66,809	0/0:35,0:34:78.25:0,78,1025	0/0:15,0:13:27.08:0,27,344	0/0:19,0:19:10.62:0,11,69	0/0:7,0:7:20.83:0,21,166	0/0:11,0:11:6.38:0,6,39	0/1:3,12:14:0:0,0,0	0/0:12,0:11:1.63:0,2,38	0/0:22,0:21:50.95:0,51,642	0/0:28,0:28:70.10:0,70,892	1/1:7,2:7:11.71:150,12,0	1/1:6,2:8:3.01:50,3,0	./.	0/0:20,0:19:42.12:0,42,543	0/0:21,0:20:42.11:0,42,540	0/0:25,0:24:57.16:0,57,728	0/0:20,0:20:48.11:0,48,591	1/1:5,5:10:22.57:278,23,0	1/1:9,2:11:21.04:251,21,0	0/1:10,1:9:27.64:83,0,28
chr10	101433867	.	CTG	C	99.83	PASS	AB=0.934;AC=16;AF=0.333;AN=48;BaseQRankSum=8.245;DP=390;FS=0.000;HRun=0;HaplotypeScore=98.8945;InbreedingCoeff=0.4024;MQ=47.83;MQ0=26;MQRankSum=-8.226;QD=1.01;ReadPosRankSum=-6.015;VQSLOD=0.1333;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:2:0:0,0,0	1/1:5,0:5:2.04:6,2,0	./.	./.	0/0:16,0:14:36.11:0,36,655	0/0:27,0:27:72.23:0,72,1346	0/0:21,0:18:44.95:0,45,835	./.	0/0:24,0:23:66.18:0,66,1150	0/0:32,0:30:90.20:0,90,1641	0/0:16,0:14:33.11:0,33,636	0/1:11,4:15:46.84:50,0,47	1/1:4,2:5:8.89:68,9,0	0/1:8,1:8:7.55:8,0,11	1/1:16,0:15:5.84:15,6,0	0/0:8,0:7:3.01:0,3,57	0/0:22,0:21:53.80:0,54,987	0/0:26,0:26:60.35:0,60,1355	1/1:9,0:5:7.78:38,8,0	0/1:4,0:4:11.32:12,0,11	./.	0/0:24,0:23:42.14:0,42,791	0/0:19,0:19:38.97:0,39,628	0/0:28,0:27:68.69:0,69,1267	0/0:20,0:20:51.02:0,51,821	0/1:9,0:8:19.28:19,0,65	1/1:5,0:5:6.30:23,6,0	0/1:10,1:9:9.63:11,0,10
chr10	101433901	.	CTG	C	254.94	PASS	AB=0.927;AC=16;AF=0.296;AN=54;BaseQRankSum=9.525;DP=472;FS=19.159;HRun=0;HaplotypeScore=108.2376;InbreedingCoeff=0.2547;MQ=49.96;MQ0=27;MQRankSum=-8.226;QD=1.98;ReadPosRankSum=-2.765;VQSLOD=0.1248;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:3:0:0,0,0	1/1:4,0:4:7.58:31,8,0	0/1:19,0:4:16.80:17,0,22	0/0:39,0:11:7.47:0,7,240	0/0:14,0:12:36.10:0,36,646	0/0:26,0:25:66.19:0,66,1185	0/0:24,0:22:56.92:0,57,882	0/1:17,3:11:2.22:125,0,2	0/0:24,0:23:63.19:0,63,1177	0/0:28,0:27:78.08:0,78,1384	0/0:21,0:21:53.79:0,54,830	0/1:6,2:8:22.78:23,0,95	1/1:4,0:3:4.96:22,5,0	0/0:5,1:5:6.22:0,6,31	1/1:14,0:14:3.24:28,3,0	0/1:7,0:6:5.78:6,0,45	0/0:23,0:22:59.84:0,60,1099	0/0:23,0:23:61.95:0,62,1102	0/1:15,0:9:16.65:60,0,17	0/1:6,3:7:15.87:16,0,54	./.	0/0:24,0:23:48.16:0,48,889	0/0:29,0:29:69.21:0,69,1270	0/0:34,0:33:62.78:0,63,1530	0/0:19,0:18:51.17:0,51,984	0/1:10,0:9:40.40:40,0,102	1/1:8,1:10:6.16:41,6,0	0/0:4,1:4:0.20:0,0,53
chr10	101433907	.	CTG	C	336.63	PASS	AB=0.959;AC=15;AF=0.278;AN=54;BaseQRankSum=10.337;DP=501;FS=4.999;HRun=0;HaplotypeScore=114.2176;InbreedingCoeff=0.1907;MQ=50.34;MQ0=26;MQRankSum=-8.473;QD=2.32;ReadPosRankSum=-1.602;VQSLOD=1.9595;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:3:0:0,0,0	1/1:3,0:4:11.55:84,12,0	0/1:29,1:7:50.88:51,0,101	0/0:53,0:16:8.87:0,9,363	0/0:16,0:14:42.10:0,42,729	0/0:27,0:26:69.15:0,69,1160	0/0:22,0:20:53.99:0,54,960	0/1:22,0:13:12.61:13,0,67	0/0:25,0:24:66.20:0,66,1223	0/0:25,0:25:74.01:0,74,1273	0/0:21,0:21:51.15:0,51,901	0/1:7,2:9:21.33:21,0,77	1/1:5,0:4:8.13:39,8,0	0/0:6,0:5:2.51:0,3,8	1/1:14,0:14:15.66:70,16,0	0/1:6,0:5:5.78:6,0,31	0/0:22,0:21:59.84:0,60,1074	0/0:23,0:23:58.05:0,58,1035	0/1:14,1:11:26.12:87,0,26	0/1:12,0:10:30.70:31,0,49	./.	0/0:21,0:20:51.16:0,51,949	0/0:32,0:32:78.19:0,78,1397	0/0:33,0:33:83.71:0,84,1506	0/0:19,0:18:51.17:0,51,982	0/1:10,0:9:49.74:50,0,88	0/1:9,0:10:13.76:44,0,14	0/0:5,0:4:5.23:0,5,65
chr10	101433913	.	CTGT	C	217.27	PASS	AB=0.940;AC=12;AF=0.214;AN=56;BaseQRankSum=8.832;DP=531;FS=48.444;HRun=0;HaplotypeScore=126.0140;InbreedingCoeff=0.1809;MQ=50.07;MQ0=21;MQRankSum=-8.018;QD=2.56;ReadPosRankSum=-1.091;VQSLOD=0.2614;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:4:0:0,0,0	0/1:4,0:4:22.80:30,0,23	0/0:42,0:12:29.90:0,30,367	0/0:66,0:20:38.12:0,38,587	0/0:17,0:16:48.16:0,48,1004	0/0:26,0:25:69.24:0,69,1482	0/0:27,0:26:72.25:0,72,1383	0/0:21,1:14:10.98:0,11,371	0/0:25,0:24:66.23:0,66,1560	0/0:25,0:25:75.26:0,75,1568	0/0:18,0:18:48.16:0,48,1002	0/0:9,0:9:9.59:0,10,93	0/0:5,0:4:7.48:0,7,47	0/0:6,0:5:5.45:0,5,25	1/1:14,0:14:17.25:120,17,0	0/1:6,0:5:3.10:3,0,13	0/0:22,0:21:60:0,60,1356	0/0:20,0:20:60.21:0,60,1337	0/1:11,2:11:45.11:45,0,229	0/1:12,0:10:20.15:20,0,61	1/1:3,1:4:3.76:16,4,0	0/0:24,0:23:55.68:0,56,1278	0/0:33,0:33:81.28:0,81,1830	0/0:35,0:35:92.89:0,93,2043	0/0:21,0:20:60.21:0,60,1395	0/1:7,2:9:62.29:62,0,162	0/1:8,2:10:24.46:59,0,24	0/1:5,0:4:4.88:5,0,55
chr10	101433925	.	CT	C	1196.18	PASS	AB=0.799;AC=24;AF=0.429;AN=56;BaseQRankSum=14.189;DP=628;FS=18.860;HRun=1;HaplotypeScore=135.9078;InbreedingCoeff=0.6202;MQ=53.08;MQ0=21;MQRankSum=-12.364;QD=7.12;ReadPosRankSum=-1.830;VQSLOD=-0.7564;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:14:12.98:42,13,0	1/1:5,2:7:17.51:99,18,0	0/0:65,0:24:36.55:0,37,597	0/0:93,0:28:60.18:0,60,731	0/0:17,0:17:51.17:0,51,803	0/0:24,0:23:66.22:0,66,1034	0/0:28,0:27:72.22:0,72,1082	0/1:22,3:17:22.68:23,0,183	0/0:29,0:29:78.25:0,78,1191	0/0:22,0:22:64.10:0,64,966	0/0:22,0:22:60.19:0,60,894	1/1:5,4:9:16.58:144,17,0	1/1:6,2:8:10.62:122,11,0	1/1:5,1:5:5.59:37,6,0	1/1:7,11:18:37.11:292,37,0	1/1:8,0:7:15.90:104,16,0	0/0:20,0:20:60.16:0,60,919	0/0:18,0:18:54.18:0,54,839	0/1:6,5:10:37.51:124,0,38	0/1:15,3:16:20.03:105,0,20	1/1:5,1:6:5.50:42,6,0	0/0:26,0:25:58.79:0,59,981	0/0:35,0:35:93.27:0,93,1404	0/0:37,0:37:92.94:0,93,1464	0/0:24,0:23:68.72:0,69,1042	0/1:13,6:17:76.70:156,0,77	1/1:7,4:11:6.13:103,6,0	1/1:6,0:4:2.69:8,3,0
chr10	101433934	.	T	TTC	2210.27	PASS	AB=0.767;AC=14;AF=0.250;AN=56;BaseQRankSum=7.965;DP=702;FS=3.084;HRun=0;HaplotypeScore=164.5612;InbreedingCoeff=-0.1430;MQ=56.11;MQ0=16;MQRankSum=-7.844;QD=11.45;ReadPosRankSum=-0.789;VQSLOD=3.5017;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:3,10:14:13.87:399,0,14	0/1:4,3:7:99:156,0,125	0/0:84,0:35:52.90:0,53,968	0/0:107,0:35:66.62:0,67,919	0/0:21,0:21:60.20:0,60,972	0/0:23,0:23:63.21:0,63,1028	0/0:29,0:29:84.29:0,84,1369	0/1:22,4:22:99:161,0,225	0/0:29,0:29:84.27:0,84,1331	0/0:19,0:19:57.19:0,57,930	0/0:21,0:21:54.18:0,54,881	0/1:10,0:12:34.94:35,0,91	0/1:11,0:14:91.99:92,0,107	0/1:14,0:16:16.50:16,0,83	0/1:19,5:23:99:340,0,316	1/1:7,4:9:5.32:223,5,0	0/0:20,0:20:54.15:0,54,844	0/0:18,0:18:51.17:0,51,831	0/0:18,0:17:9.69:0,10,267	0/1:15,7:22:99:339,0,114	0/1:3,2:6:22.72:52,0,23	0/0:23,0:23:46.05:0,46,1054	0/0:31,0:31:90.29:0,90,1435	0/0:36,0:37:93.03:0,93,1508	0/0:25,0:24:65.89:0,66,1028	0/1:14,8:20:99:414,0,284	0/1:11,2:13:87.06:87,0,212	0/1:2,1:2:5.97:53,0,6
chr10	101434916	.	TG	T	508.69	PASS	AB=0.984;AC=20;AF=0.357;AN=56;BaseQRankSum=19.988;DP=626;FS=1.267;HRun=1;HaplotypeScore=189.4692;InbreedingCoeff=0.5051;MQ=83.69;MQ0=0;MQRankSum=-18.823;QD=1.70;ReadPosRankSum=2.991;VQSLOD=-0.7255;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,1:34:34.72:85,35,0	1/1:8,1:9:12.11:32,12,0	0/0:24,0:24:63.17:0,63,936	0/0:25,1:26:49.78:0,50,899	0/0:22,0:22:63.20:0,63,983	0/0:22,0:22:66.23:0,66,1053	0/0:23,0:23:69.24:0,69,1101	0/1:26,0:26:32.78:33,0,297	0/0:29,0:29:87.30:0,87,1387	0/0:25,0:25:75.24:0,75,1160	0/0:21,0:21:63.19:0,63,982	1/1:24,0:24:27.03:68,27,0	1/1:16,1:17:20.13:54,20,0	1/1:31,0:31:5.78:34,6,0	1/1:34,0:34:22.56:67,23,0	1/1:22,1:23:31.65:110,32,0	0/0:21,0:21:63.17:0,63,979	0/0:13,0:13:39.13:0,39,624	0/1:14,1:15:58.90:59,0,149	0/1:26,0:26:5.73:32,0,6	0/1:12,0:12:9.37:9,0,18	0/0:17,0:17:51.17:0,51,813	0/0:25,0:25:75.24:0,75,1176	0/0:34,0:34:99:0,102,1631	0/0:22,0:22:66.23:0,66,1055	0/1:19,0:19:31.90:66,0,32	0/1:28,1:29:15.36:56,0,15	0/0:3,0:3:0.09:0,0,16
chr10	101434917	.	G	GCT	14270.67	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=20.265;DP=625;FS=9.216;HRun=0;HaplotypeScore=165.5978;InbreedingCoeff=0.9853;MQ=83.73;MQ0=0;MQRankSum=-20.056;QD=48.05;ReadPosRankSum=-0.080;VQSLOD=4.2145;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,30:34:84.29:1479,84,0	1/1:2,7:9:27.09:477,27,0	0/0:24,0:24:62.41:0,62,844	0/0:26,0:26:65.12:0,65,842	0/0:22,0:22:63.20:0,63,940	0/0:22,0:22:63.21:0,63,958	0/0:23,0:23:69.23:0,69,1052	1/1:8,17:25:75.11:1148,75,0	0/0:29,0:29:87.30:0,87,1326	0/0:24,0:24:69.23:0,69,1052	0/0:20,0:20:60.20:0,60,915	1/1:2,22:25:69.23:1201,69,0	1/1:3,14:17:51.17:880,51,0	1/1:3,28:31:90.31:1546,90,0	1/1:3,31:34:99:1647,99,0	1/1:2,21:23:69.13:1176,69,0	0/0:24,0:24:63.17:0,63,939	0/0:13,0:13:39.13:0,39,597	1/1:4,9:13:39.13:662,39,0	1/1:1,24:25:72.25:1245,72,0	1/1:3,9:12:23.96:355,24,0	0/0:17,0:17:51.17:0,51,778	0/0:26,0:26:75.24:0,75,1127	0/0:35,0:35:99:0,102,1549	0/0:23,0:23:66.22:0,66,1011	1/1:2,17:19:57.18:1008,57,0	1/1:2,25:27:78.27:1356,78,0	1/1:2,1:3:6.02:93,6,0
chr10	101435702	.	T	TGGGGG	6509.04	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=10.241;DP=563;FS=1.857;HRun=6;HaplotypeScore=120.6934;InbreedingCoeff=0.9751;MQ=76.87;MQ0=2;MQRankSum=-8.013;QD=26.25;ReadPosRankSum=-2.980;VQSLOD=0.6355;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:24:11.99:244,12,0	1/1:2,1:16:21.07:463,21,0	0/0:26,0:24:63.81:0,64,1030	0/0:26,0:25:63.17:0,63,1051	0/0:29,0:29:75.24:0,75,1339	0/0:18,0:18:48.15:0,48,859	0/0:17,0:17:51.17:0,51,903	1/1:4,0:29:56.94:897,57,0	0/0:20,0:20:60.21:0,60,1089	0/0:30,0:29:75.22:0,75,1350	0/0:23,0:23:63.19:0,63,1091	1/1:0,0:14:30.10:737,30,0	1/1:3,1:20:42.14:1028,42,0	1/1:2,0:22:39.09:935,39,0	1/1:15,0:13:11.96:158,12,0	1/1:1,0:16:15.52:339,16,0	0/0:26,0:26:66.15:0,66,1127	0/0:21,0:21:59.87:0,60,1043	1/1:7,0:9:14.96:230,15,0	1/1:4,2:13:15.01:254,15,0	1/1:9,0:23:12.03:181,12,0	0/0:12,0:12:33.11:0,33,599	0/0:26,0:26:72.21:0,72,1276	0/0:21,0:21:54.17:0,54,961	0/0:20,0:20:60.20:0,60,1059	1/1:3,0:14:20.98:340,21,0	1/1:4,0:25:22.63:469,23,0	1/1:2,0:7:12.04:236,12,0
chr10	101436137	.	T	TTTTCCTTCAG	42680.43	PASS	AB=0.549;AC=26;AF=0.464;AN=56;BaseQRankSum=-10.180;DP=808;FS=8.603;HRun=0;HaplotypeScore=191.5518;InbreedingCoeff=0.9028;MQ=75.61;MQ0=1;MQRankSum=-19.108;QD=97.67;ReadPosRankSum=-1.072;VQSLOD=4.2939;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,18:39:60.21:2865,60,0	1/1:3,3:9:18.06:893,18,0	0/0:27,0:27:63.20:0,63,1564	0/0:16,0:15:33.11:0,33,765	0/0:32,0:31:96.31:0,96,2868	0/0:25,0:25:69.22:0,69,2026	0/0:32,0:32:81.24:0,81,2235	1/1:18,6:47:99:4625,126,0	0/0:31,0:31:90.30:0,90,2656	0/0:30,0:30:84.28:0,84,2584	0/0:24,0:24:66.21:0,66,2009	1/1:8,18:38:72.09:3461,72,0	1/1:6,15:30:59.84:2925,60,0	1/1:18,14:31:84.20:3494,84,0	1/1:5,30:44:90.31:4658,90,0	0/1:8,26:41:0.15:4559,0,0	0/0:23,0:23:60.21:0,60,1831	0/0:11,0:11:30.10:0,30,844	1/1:10,6:30:78.20:2774,78,0	1/1:6,23:37:84.29:3916,84,0	1/1:3,5:10:18.06:934,18,0	0/0:30,0:30:87.29:0,87,2715	0/0:31,0:31:87.27:0,87,2560	0/0:31,0:31:90.28:0,90,2622	0/0:28,0:27:78.24:0,78,2301	0/1:5,19:31:6.28:3772,0,6	1/1:11,12:34:54.66:2712,55,0	1/1:1,6:15:21.07:1092,21,0
chr10	101436288	.	GT	G	12761.29	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=19.803;DP=713;FS=13.219;HRun=2;HaplotypeScore=95.1455;InbreedingCoeff=0.9312;MQ=77.37;MQ0=0;MQRankSum=-6.951;QD=32.72;ReadPosRankSum=1.734;VQSLOD=3.4793;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,37:39:93.30:1206,93,0	1/1:1,9:10:27.09:350,27,0	0/0:18,0:18:51.14:0,51,731	0/1:17,0:17:12.39:12,0,450	0/0:28,0:28:81.27:0,81,1209	0/0:21,0:20:60.20:0,60,894	0/0:20,0:20:60.19:0,60,880	1/1:0,28:28:84.17:1033,84,0	0/0:30,0:30:90.30:0,90,1344	0/0:23,0:23:66.22:0,66,989	0/0:29,0:29:84.28:0,84,1254	1/1:0,25:25:75.24:971,75,0	1/1:1,24:25:66.21:851,66,0	1/1:2,21:22:60.20:777,60,0	1/1:1,36:37:99:1281,99,0	1/1:5,29:34:90.29:1157,90,0	0/0:38,0:38:99:0,111,1639	0/0:19,0:19:48.16:0,48,714	1/1:2,17:19:51.13:631,51,0	1/1:0,35:35:90.29:1167,90,0	1/1:0,29:29:78.25:1011,78,0	0/0:26,0:26:78.26:0,78,1146	0/0:19,0:19:51.17:0,51,757	0/0:25,0:25:72.24:0,72,1074	0/0:27,0:27:81.25:0,81,1192	1/1:3,34:37:18.34:1187,18,0	1/1:0,20:20:54.18:699,54,0	1/1:0,12:12:33.11:428,33,0
chr10	101436755	.	C	CTA	16346.07	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-8.493;DP=659;FS=1.670;HRun=0;HaplotypeScore=74.5299;InbreedingCoeff=0.9992;MQ=81.88;MQ0=1;MQRankSum=-4.037;QD=50.45;ReadPosRankSum=2.372;VQSLOD=5.4147;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:29:75.26:1448,75,0	1/1:0,10:9:27.09:515,27,0	0/0:24,0:24:66.14:0,66,934	0/0:13,0:13:30.07:0,30,407	0/0:37,0:37:99:0,108,1629	0/0:24,0:24:72.24:0,72,1102	0/0:17,0:17:48.16:0,48,728	1/1:1,30:31:90.29:1688,90,0	0/0:26,0:26:78.25:0,78,1172	0/0:30,0:30:81.24:0,81,1171	0/0:20,0:20:60.19:0,60,896	1/1:0,22:22:63.22:1215,63,0	1/1:0,32:33:75.26:1447,75,0	1/1:1,21:20:57.20:1100,57,0	1/1:1,22:23:57.20:1100,57,0	1/1:0,22:22:60.21:1155,60,0	0/0:21,0:21:57.17:0,57,847	0/0:13,0:13:39.13:0,39,588	1/1:1,13:14:39.12:715,39,0	1/1:1,25:26:69.24:1331,69,0	1/1:0,25:25:60.21:1159,60,0	0/0:23,0:23:66.21:0,66,988	0/0:27,0:27:81.27:0,81,1235	0/0:36,0:36:99:0,108,1629	0/0:24,0:24:66.21:0,66,986	1/1:1,32:33:53.39:1797,53,0	1/1:2,23:26:66.23:1271,66,0	1/1:0,8:8:21.07:405,21,0
chr10	101436944	.	TTTTCTTTC	T	8877.13	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=14.902;DP=545;FS=5.174;HRun=0;HaplotypeScore=145.4959;InbreedingCoeff=0.9661;MQ=59.22;MQ0=6;MQRankSum=-13.021;QD=36.99;ReadPosRankSum=1.871;VQSLOD=4.5682;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:38,1:38:54.14:1134,54,0	1/1:6,0:6:15.05:336,15,0	0/0:17,0:11:20.34:0,20,508	0/0:10,0:5:8.95:0,9,192	0/0:35,0:35:99:0,99,3541	0/0:19,0:19:54.13:0,54,1651	0/0:18,0:16:42.14:0,42,1519	1/1:22,0:22:48.05:738,48,0	0/0:14,0:14:33.11:0,33,1256	0/0:25,0:23:63.21:0,63,2046	0/0:23,0:23:63.20:0,63,2235	1/1:13,0:13:12.04:268,12,0	1/1:15,0:15:27.09:602,27,0	1/1:19,0:17:33.11:688,33,0	1/1:11,0:11:21.07:460,21,0	1/1:14,0:14:21.07:466,21,0	0/0:21,0:21:57.19:0,57,2175	0/0:30,0:28:63.16:0,63,2289	1/1:13,0:12:8.18:391,8,0	1/1:18,3:21:54.11:1036,54,0	1/1:8,0:8:9.03:181,9,0	0/0:24,0:24:63.21:0,63,2427	0/0:25,0:25:66.18:0,66,2289	0/0:24,0:24:66.23:0,66,2434	0/0:20,0:20:51.15:0,51,1855	1/1:20,0:20:54.12:994,54,0	1/1:27,0:27:43.08:901,43,0	1/1:11,1:12:30.10:683,30,0
chr10	101436948	.	CTTTCTTTCT	C	11587.65	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=14.180;DP=542;FS=3.806;HRun=0;HaplotypeScore=141.3325;InbreedingCoeff=0.9703;MQ=57.64;MQ0=12;MQRankSum=-12.936;QD=49.31;ReadPosRankSum=2.415;VQSLOD=4.8399;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,32:34:54.14:1470,54,0	1/1:0,6:6:15.05:458,15,0	0/0:17,0:11:24.07:0,24,586	0/0:9,0:4:8.97:0,9,211	0/0:36,0:36:99:0,102,4047	0/0:18,0:18:54.13:0,54,1832	0/0:20,0:18:51.17:0,51,1903	1/1:4,17:21:48.15:960,48,0	0/0:14,0:13:33.11:0,33,1385	0/0:27,0:25:72.24:0,72,2489	0/0:23,0:23:66.21:0,66,2619	1/1:1,14:15:12.04:366,12,0	1/1:0,14:14:27.09:824,27,0	1/1:1,17:16:33.11:934,33,0	1/1:0,10:10:21.07:623,21,0	1/1:1,13:13:21.07:638,21,0	0/0:22,0:22:60.20:0,60,2528	0/0:30,0:28:53.55:0,54,2612	1/1:10,5:13:10.61:511,11,0	1/1:3,18:21:54.11:1161,54,0	1/1:1,7:8:9.03:255,9,0	0/0:23,0:23:63.21:0,63,2727	0/0:22,0:22:66.18:0,66,2545	0/0:24,0:24:69.24:0,69,2882	0/0:22,0:21:54.17:0,54,2186	1/1:1,18:19:53.40:1269,53,0	1/1:2,24:26:43.09:1245,43,0	1/1:1,10:11:30.10:873,30,0
chr10	101437420	.	CATATATATAT	C	3949.43	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=1.453;DP=235;FS=0.656;HRun=0;HaplotypeScore=79.0038;InbreedingCoeff=0.7725;MQ=83.11;MQ0=4;MQRankSum=-3.476;QD=25.16;ReadPosRankSum=0.025;VQSLOD=2.4797;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:14.97:139,15,0	1/1:1,1:2:3.01:90,3,0	0/1:14,0:11:2.93:3,0,39	0/0:18,0:10:15.70:0,16,125	0/0:8,0:8:15.02:0,15,198	0/0:3,0:3:5.99:0,6,50	0/0:4,0:4:6.02:0,6,100	1/1:36,0:35:90.18:1112,90,0	0/0:2,0:2:6:0,6,74	0/0:4,0:4:9.03:0,9,160	0/0:4,0:4:9:0,9,100	1/1:7,2:9:21.04:365,21,0	1/1:7,2:9:21.06:369,21,0	1/1:4,3:7:15.02:319,15,0	1/1:11,0:11:17.74:175,18,0	1/1:2,4:6:15.04:370,15,0	0/0:17,0:17:31.43:0,31,684	0/0:6,0:6:18.06:0,18,407	1/1:8,0:8:18.04:208,18,0	1/1:5,0:5:11.96:95,12,0	1/1:7,0:7:15.02:185,15,0	0/0:2,0:2:3:0,3,25	0/0:3,0:3:3.01:0,3,50	0/0:3,0:3:6.01:0,6,75	0/0:4,0:4:9.02:0,9,218	1/1:6,0:6:14.97:161,15,0	1/1:14,0:14:17.83:174,18,0	1/1:15,0:14:16.60:184,17,0
chr10	101437430	.	TATATAC	T	2349.51	PASS	AB=1.000;AC=32;AF=0.640;AN=50;BaseQRankSum=6.837;DP=196;FS=6.602;HRun=0;HaplotypeScore=63.8260;InbreedingCoeff=0.4173;MQ=72.16;MQ0=5;MQRankSum=-3.852;QD=13.58;ReadPosRankSum=1.855;VQSLOD=1.2087;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:5.91:39,6,0	1/1:1,0:1:3.01:46,3,0	1/1:7,0:4:2.04:6,2,0	0/1:19,0:10:10.18:10,0,31	0/0:5,0:5:8.99:0,9,75	./.	0/0:2,0:2:5.99:0,6,50	1/1:32,0:30:51.32:431,51,0	0/0:2,0:2:3:0,3,25	0/0:3,0:3:9:0,9,81	0/0:2,0:2:3:0,3,25	1/1:8,0:8:14.95:158,15,0	1/1:10,0:10:17.87:175,18,0	1/1:5,0:5:9.03:138,9,0	1/1:3,6:9:12.04:241,12,0	1/1:5,0:5:12.04:167,12,0	0/1:16,0:16:58.82:59,0,202	0/1:7,0:7:2.85:3,0,146	1/1:0,5:5:14.95:173,15,0	./.	1/1:5,0:5:8.94:92,9,0	./.	0/0:2,0:2:3:0,3,25	0/0:1,0:1:3:0,3,25	0/1:3,0:3:12.31:12,0,86	1/1:5,0:5:6.15:48,6,0	1/1:3,9:12:14.92:257,15,0	1/1:4,13:16:24.89:455,25,0
chr10	101437436	.	CAT	C	603.67	PASS	AB=1.000;AC=29;AF=0.853;AN=34;BaseQRankSum=3.242;DP=188;FS=1.988;HRun=0;HaplotypeScore=62.4595;InbreedingCoeff=0.3395;MQ=74.19;MQ0=5;MQRankSum=-1.180;QD=5.20;ReadPosRankSum=2.913;VQSLOD=2.2993;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,4:8:6:58,6,0	1/1:0,1:1:3:27,3,0	1/1:8,0:5:1.55:4,2,0	./.	0/0:4,2:6:0:0,0,0	./.	./.	0/0:30,0:28:5.94:0,6,28	./.	./.	./.	1/1:4,4:8:6:54,6,0	1/1:6,3:9:6:54,6,0	1/1:2,3:5:12.01:114,12,0	1/1:7,0:7:9.17:40,9,0	1/1:0,5:5:15.02:146,15,0	1/1:11,0:15:12.91:60,13,0	1/1:7,0:7:0.47:1,0,0	1/1:5,0:5:2.74:12,3,0	./.	1/1:7,0:7:1.76:6,2,0	./.	./.	./.	0/1:3,0:3:5.88:6,0,19	./.	1/1:11,0:11:6.74:36,7,0	1/1:17,0:16:17.03:83,17,0
chr10	101437902	.	T	TGAAAGTTGTACATTTTTTTTTTTA	38671.92	PASS	AB=0.950;AC=21;AF=0.375;AN=56;BaseQRankSum=8.874;DP=682;FS=4.823;HRun=0;HaplotypeScore=418.8540;InbreedingCoeff=0.9221;MQ=81.63;MQ0=0;MQRankSum=-16.318;QD=137.13;ReadPosRankSum=-3.149;VQSLOD=3.6522;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:41:90.19:0,90,4648	0/0:10,0:10:18.05:0,18,981	0/0:24,0:23:38.20:0,38,887	0/0:20,0:20:36.01:0,36,1048	0/0:26,0:26:72.20:0,72,3586	0/0:32,0:32:81.20:0,81,3817	0/0:28,0:28:45.10:0,45,2193	1/1:31,0:30:63.20:3017,63,0	0/0:14,0:14:36.11:0,36,1849	0/0:27,0:27:63.21:0,63,3285	0/0:26,0:26:72.25:0,72,3890	1/1:28,3:31:57.17:3091,57,0	1/1:19,3:23:63.20:4472,63,0	1/1:22,3:25:63.17:4683,63,0	1/1:15,0:17:27.09:1896,27,0	0/0:25,0:25:48.13:0,48,2001	0/0:26,0:26:66.15:0,66,3176	0/0:15,0:15:42.12:0,42,1959	1/1:27,0:29:66.15:2716,66,0	1/1:30,0:32:84.28:5002,84,0	1/1:14,0:14:24.07:1133,24,0	0/0:33,0:33:93.26:0,93,4650	0/0:22,0:22:42.12:0,42,2115	0/0:17,0:17:42.12:0,42,1998	0/0:14,0:14:39.09:0,39,1859	0/1:36,0:38:93.47:5427,0,93	1/1:28,1:31:75.25:4875,75,0	1/1:11,0:11:33.11:2360,33,0
chr10	101437946	.	G	GA	7560.42	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-7.789;DP=563;FS=15.864;HRun=8;HaplotypeScore=67.7304;InbreedingCoeff=0.9911;MQ=70.90;MQ0=0;MQRankSum=-6.087;QD=26.81;ReadPosRankSum=-0.317;VQSLOD=3.7024;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:36:71.83:1080,72,0	1/1:1,5:6:15.04:173,15,0	0/0:13,0:13:17.98:0,18,164	0/0:4,0:4:12.01:0,12,110	0/0:23,0:23:60.01:0,60,544	0/0:26,0:26:72.04:0,72,658	0/0:19,0:19:45.02:0,45,411	1/1:5,30:36:93.08:1040,93,0	0/0:16,0:16:39.02:0,39,357	0/0:29,0:29:72.01:0,72,653	0/0:20,0:20:45.02:0,45,412	1/1:2,17:19:45.06:491,45,0	1/1:2,17:19:45.13:520,45,0	1/1:5,13:18:39.03:415,39,0	1/1:2,11:13:27.08:312,27,0	1/1:2,26:28:69.21:796,69,0	0/0:29,0:29:75.01:0,75,682	0/0:15,0:15:38.19:0,38,328	1/1:2,14:16:42.10:466,42,0	1/1:2,20:22:42.08:469,42,0	1/1:1,8:9:18.05:208,18,0	0/0:32,0:32:93.05:0,93,851	0/0:24,0:24:69.02:0,69,627	0/0:16,0:16:45.02:0,45,412	0/0:15,0:15:36.02:0,36,330	1/1:2,23:26:47.58:783,48,0	1/1:7,14:21:33.10:378,33,0	1/1:0,12:13:38.95:430,39,0
chr10	101438267	.	C	CT	4418.95	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=10.298;DP=558;FS=1.148;HRun=6;HaplotypeScore=81.8542;InbreedingCoeff=0.9778;MQ=77.01;MQ0=1;MQRankSum=-0.137;QD=17.61;ReadPosRankSum=-0.126;VQSLOD=4.5343;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:16:25.61:276,26,0	1/1:1,3:4:9.03:103,9,0	0/0:24,0:20:19.93:0,20,127	0/0:17,0:14:15.99:0,16,116	0/0:24,0:24:58.77:0,59,579	0/0:25,0:25:63.07:0,63,608	0/0:19,0:19:52.72:0,53,499	1/1:23,2:25:50.92:459,51,0	0/0:15,0:15:27.40:0,27,284	0/0:27,0:27:72.02:0,72,675	0/0:28,0:28:69.06:0,69,665	1/1:13,0:13:14.62:44,15,0	1/1:17,0:17:22.71:86,23,0	1/1:1,0:14:34.61:183,35,0	1/1:18,2:20:36.06:361,36,0	1/1:5,12:17:20.62:346,21,0	0/0:28,0:28:69.02:0,69,657	0/0:20,0:20:47.34:0,47,493	1/1:13,1:14:39.04:372,39,0	1/1:24,1:25:45.07:388,45,0	1/1:5,0:5:9.02:90,9,0	0/0:19,0:19:54.07:0,54,528	0/0:23,0:23:54:0,54,500	0/0:14,0:14:41.98:0,42,398	0/0:23,0:23:60.04:0,60,584	1/1:30,3:33:55.62:795,56,0	1/1:26,4:30:62.48:616,62,0	1/1:18,0:18:32.42:299,32,0
chr10	101438273	.	T	TTA	6492.54	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=-4.709;DP=545;FS=0.728;HRun=0;HaplotypeScore=86.2289;InbreedingCoeff=0.8214;MQ=75.91;MQ0=1;MQRankSum=0.160;QD=25.66;ReadPosRankSum=0.088;VQSLOD=5.3972;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:21.60:118,22,0	1/1:3,0:3:8.28:37,8,0	0/1:24,0:18:3.59:4,0,149	0/0:19,0:16:22.06:0,22,166	0/0:23,0:24:66.49:0,66,846	0/0:22,0:22:66.09:0,66,869	0/0:18,0:21:57.49:0,57,690	1/1:3,15:19:53.86:705,54,0	0/0:10,0:11:30.53:0,31,388	0/0:27,0:27:78.01:0,78,915	0/0:25,0:26:71.83:0,72,942	0/0:15,0:15:15:0,15,42	0/1:17,0:17:15.54:16,0,17	1/1:14,0:14:35.94:293,36,0	1/1:2,14:19:36.01:615,36,0	0/1:17,0:17:0.57:100,0,1	0/0:26,0:26:52.99:0,53,899	0/0:22,0:23:59.28:0,59,734	1/1:1,11:14:41.96:618,42,0	1/1:1,22:26:59.67:774,60,0	1/1:0,4:4:9.03:173,9,0	0/0:19,0:20:57.08:0,57,764	0/0:20,0:23:56.99:0,57,722	0/0:14,0:14:42.04:0,42,562	0/0:20,0:21:63.14:0,63,857	1/1:4,27:33:54.03:1414,54,0	1/1:4,26:32:62.59:1037,63,0	1/1:0,15:17:33.11:589,33,0
chr10	101439563	.	GT	G	2421.97	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=4.684;DP=533;FS=7.001;HRun=11;HaplotypeScore=99.4834;InbreedingCoeff=0.8361;MQ=64.35;MQ0=3;MQRankSum=-6.483;QD=17.18;ReadPosRankSum=-0.177;VQSLOD=3.7943;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:28:36.65:0,37,202	0/0:2,0:2:3.63:0,4,14	0/0:25,0:8:3.17:0,3,32	0/0:33,3:16:1.87:0,2,107	0/0:21,1:22:29.10:0,29,472	0/0:19,0:21:47.27:0,47,452	0/0:19,0:19:42.56:0,43,434	1/1:11,10:21:47.20:361,47,0	0/0:22,0:22:60.09:0,60,625	0/0:23,1:24:34.34:0,34,544	0/0:16,0:17:38.68:0,39,386	0/0:12,0:13:32.44:0,32,282	0/0:13,0:14:32.19:0,32,360	0/0:15,0:15:38.33:0,38,353	1/1:1,13:14:38.87:308,39,0	0/0:15,0:16:26.47:0,26,141	0/0:28,1:29:38.24:0,38,574	0/0:19,0:19:24.78:0,25,350	1/1:12,16:29:61.86:486,62,0	1/1:5,20:25:65.47:522,65,0	1/1:3,2:5:5.98:49,6,0	0/0:14,0:14:2.64:0,3,310	0/0:14,1:18:26.03:0,26,420	0/0:9,0:9:23.59:0,24,217	0/0:26,1:28:53.23:0,53,716	1/1:6,14:19:17.72:336,18,0	1/1:6,20:26:40.08:527,40,0	1/1:0,1:1:3:25,3,0
chr10	101439571	.	T	TTG	1502.64	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.258;DP=556;FS=6.798;HRun=0;HaplotypeScore=123.7654;InbreedingCoeff=0.8848;MQ=57.74;MQ0=8;MQRankSum=-5.462;QD=32.67;ReadPosRankSum=-1.784;VQSLOD=4.9843;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,16:29:68.71:940,69,0	1/1:0,2:2:6.02:101,6,0	0/0:36,0:8:16.68:0,17,156	0/0:44,0:15:23.15:0,23,223	0/0:24,0:24:67.30:0,67,800	0/0:19,0:19:50.15:0,50,619	0/0:15,0:15:45.08:0,45,581	0/0:22,0:21:54.93:0,55,400	0/0:23,0:23:69.18:0,69,924	0/0:23,0:23:69.16:0,69,886	0/0:21,0:21:59.75:0,60,676	0/0:13,0:13:38.74:0,39,455	0/0:14,0:14:42.02:0,42,538	0/0:16,0:16:42.04:0,42,518	0/0:14,0:14:38.84:0,39,304	1/1:6,9:15:44.95:597,45,0	0/0:27,0:27:62.97:0,63,957	0/0:16,0:16:48.12:0,48,617	0/0:27,0:27:71.53:0,72,535	0/0:28,0:28:80.16:0,80,568	0/0:5,0:4:5.98:0,6,45	0/0:14,0:14:41.76:0,42,529	0/0:18,0:18:52.85:0,53,630	0/0:8,0:8:21.07:0,21,299	0/0:29,0:29:83.28:0,83,1059	0/0:23,0:22:62.67:0,63,494	0/0:28,0:28:82.47:0,82,623	0/0:2,0:2:5.95:0,6,42
chr10	101439592	.	GGT	G	806.57	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=8.878;DP=603;FS=23.304;HRun=0;HaplotypeScore=126.7324;InbreedingCoeff=0.7122;MQ=49.21;MQ0=16;MQRankSum=-6.196;QD=8.15;ReadPosRankSum=-1.973;VQSLOD=1.4673;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,2:25:61.25:587,61,0	1/1:1,0:1:3:26,3,0	0/0:58,0:9:4.48:0,4,231	0/1:60,0:11:2.19:2,0,43	0/0:21,0:21:62.41:0,62,1077	0/0:16,0:16:45.14:0,45,826	0/0:16,0:16:29.35:0,29,796	0/0:25,1:25:48.54:0,49,339	0/0:22,0:22:66.11:0,66,1165	0/0:23,0:23:69.11:0,69,1217	0/0:19,0:19:49.19:0,49,990	0/0:14,0:14:39.12:0,39,679	0/0:16,0:16:48.14:0,48,820	0/0:16,0:16:48.15:0,48,862	0/0:17,0:17:42.73:0,43,260	1/1:12,1:13:34.36:323,34,0	0/0:22,0:22:66.09:0,66,1255	0/0:16,0:16:41.31:0,41,836	0/0:29,0:28:53.01:0,53,392	0/0:36,0:35:73.13:0,73,507	0/0:8,0:6:11.79:0,12,77	0/0:14,0:14:39.13:0,39,718	0/0:19,0:19:57.01:0,57,999	0/0:10,0:10:3.78:0,4,477	0/0:28,0:28:84.17:0,84,1548	0/0:28,0:27:67.67:0,68,378	0/0:28,0:28:54.76:0,55,402	0/0:2,0:2:5.75:0,6,30
chr10	101439593	.	GT	G	3590.89	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=7.293;DP=609;FS=12.825;HRun=9;HaplotypeScore=110.0188;InbreedingCoeff=0.8466;MQ=49.01;MQ0=16;MQRankSum=-9.329;QD=20.76;ReadPosRankSum=-1.271;VQSLOD=2.3670;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:10.44:0,10,91	0/0:1,0:1:2.37:0,2,8	0/0:59,0:9:13.73:0,14,124	0/0:56,0:11:3.53:0,4,20	0/0:21,0:21:37.59:0,38,624	0/0:16,0:16:42.10:0,42,466	0/0:16,0:16:42.07:0,42,459	1/1:8,17:24:62.93:564,63,0	0/0:22,0:22:53.48:0,53,625	0/0:22,0:23:65.67:0,66,693	0/0:18,0:19:48.62:0,49,552	0/0:13,0:14:35.96:0,36,380	0/0:15,0:16:44.41:0,44,447	0/0:16,0:16:48.11:0,48,523	1/1:6,11:17:39:350,39,0	0/0:14,0:14:2.72:0,3,63	0/0:22,0:22:63.14:0,63,707	0/0:16,0:16:42.11:0,42,473	1/1:8,21:28:64.98:565,65,0	1/1:11,25:35:89.83:792,90,0	1/1:6,2:6:0.44:42,0,0	0/0:14,0:14:36.96:0,37,396	0/0:18,1:19:23.66:0,24,512	0/0:10,0:10:26.57:0,27,286	0/0:29,0:29:81.05:0,81,870	1/1:7,21:27:60.02:548,60,0	1/1:9,19:28:75.01:675,75,0	1/1:0,2:2:6:55,6,0
chr10	101439599	.	T	TTG	1581.68	PASS	AB=0.983;AC=7;AF=0.125;AN=56;BaseQRankSum=9.320;DP=615;FS=18.051;HRun=0;HaplotypeScore=132.2988;InbreedingCoeff=0.7834;MQ=52.22;MQ0=15;MQRankSum=-7.234;QD=15.36;ReadPosRankSum=-0.033;VQSLOD=2.5320;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,15:27:45.29:971,45,0	1/1:0,1:1:3.01:52,3,0	0/0:57,0:10:20.94:0,21,208	0/1:58,0:12:4.25:4,0,28	0/0:22,0:22:63.17:0,63,848	0/0:15,0:15:42.13:0,42,599	0/0:17,0:17:48.58:0,49,661	0/0:27,0:26:64.24:0,64,401	0/0:22,0:22:61.44:0,61,854	0/0:23,0:23:68.58:0,69,929	0/0:21,0:21:62.64:0,63,814	0/0:14,0:14:38.44:0,38,490	0/0:15,0:15:43.97:0,44,545	0/0:17,0:17:51.16:0,51,729	0/0:15,0:15:39.70:0,40,247	1/1:4,11:16:45.11:689,45,0	0/0:23,0:23:68.96:0,69,900	0/0:16,0:16:25.80:0,26,593	0/0:31,0:30:83.18:0,83,604	0/0:36,0:35:95.89:0,96,716	0/0:6,0:5:11.71:0,12,87	0/0:14,0:14:39.11:0,39,532	0/0:20,0:20:54.07:0,54,720	0/0:9,0:9:18.58:0,19,344	0/0:29,0:29:87.21:0,87,1167	0/0:27,0:26:62.01:0,62,435	0/0:32,0:32:94.34:0,94,689	0/0:3,0:3:8.95:0,9,68
chr10	101439616	.	GGT	G	1618.13	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=7.354;DP=605;FS=9.816;HRun=0;HaplotypeScore=127.2104;InbreedingCoeff=0.7895;MQ=59.74;MQ0=15;MQRankSum=-6.367;QD=15.27;ReadPosRankSum=-0.034;VQSLOD=3.1476;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,28:32:74.91:1039,75,0	1/1:0,3:3:6.02:93,6,0	0/1:54,0:15:0.81:1,0,259	0/0:51,0:15:23.21:0,23,321	0/0:22,0:22:60.08:0,60,909	0/0:13,0:13:39.06:0,39,626	0/0:20,0:20:60.07:0,60,894	0/0:23,0:23:52.89:0,53,405	0/0:23,0:23:68.96:0,69,1157	0/0:32,0:32:89.16:0,89,1486	0/0:20,0:20:60.16:0,60,1130	0/0:15,0:15:45.15:0,45,799	0/0:14,0:14:39.09:0,39,651	0/0:15,0:15:44.14:0,44,296	0/0:11,0:11:11.06:0,11,134	1/1:3,14:17:45.04:620,45,0	0/0:25,0:25:43.42:0,43,1117	0/0:18,0:18:47.91:0,48,808	0/0:33,0:32:46.48:0,46,505	0/0:34,1:35:21.99:0,22,529	0/0:3,0:2:2.96:0,3,19	0/0:10,0:10:26.76:0,27,472	0/0:18,0:18:54.09:0,54,929	0/0:7,0:7:21.04:0,21,376	0/0:22,0:22:59.55:0,60,1109	0/0:28,0:27:66.48:0,66,497	0/0:34,0:33:90.70:0,91,599	0/0:7,0:7:9.65:0,10,89
chr10	101439617	.	GT	G	3009.48	PASS	AB=0.660;AC=23;AF=0.411;AN=56;BaseQRankSum=9.550;DP=606;FS=3.081;HRun=12;HaplotypeScore=111.7813;InbreedingCoeff=0.8814;MQ=60.51;MQ0=15;MQRankSum=-5.446;QD=12.59;ReadPosRankSum=1.940;VQSLOD=3.5102;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:50.12:200,50,0	1/1:3,0:3:5.27:21,5,0	0/0:53,0:15:11.37:0,11,137	0/0:53,0:17:16.74:0,17,192	0/0:18,3:22:32.68:0,33,426	0/0:14,1:15:10.41:0,10,250	0/0:17,1:19:15.76:0,16,319	1/1:5,16:22:25.35:366,25,0	0/0:20,0:21:59.08:0,59,543	0/0:33,1:34:52.96:0,53,683	0/0:20,0:20:55.66:0,56,552	0/0:15,0:15:44.40:0,44,412	0/0:14,0:14:32.55:0,33,310	1/1:7,8:15:41.05:290,41,0	1/1:3,6:10:21.21:148,21,0	1/1:16,1:17:33.91:135,34,0	0/0:24,1:25:25.01:0,25,488	0/0:16,1:18:14.57:0,15,336	0/1:16,15:32:5.01:295,0,5	1/1:9,26:35:51.45:585,51,0	1/1:1,2:2:2.99:23,3,0	0/0:10,0:10:21.04:0,21,213	0/0:18,0:18:47.15:0,47,435	0/0:7,0:7:21.01:0,21,202	0/0:20,1:22:29.16:0,29,504	1/1:8,20:27:36.96:450,37,0	1/1:8,25:33:74.38:590,74,0	1/1:0,6:7:16.98:122,17,0
chr10	101441701	.	TA	T	262.12	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.445;DP=648;FS=2.150;HRun=9;HaplotypeScore=58.3115;InbreedingCoeff=0.9422;MQ=72.54;MQ0=0;MQRankSum=-2.442;QD=14.56;ReadPosRankSum=1.363;VQSLOD=3.7091;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.17:0,66,742	0/0:11,0:11:24.07:0,24,277	0/0:11,0:11:18.05:0,18,205	0/0:9,0:9:11.76:0,12,119	0/0:20,0:20:57.17:0,57,658	0/0:32,0:32:87.26:0,87,1004	0/0:18,0:18:51.15:0,51,589	0/0:35,0:35:90.25:0,90,1021	0/0:24,0:24:66.20:0,66,762	0/0:23,0:23:69.21:0,69,797	0/0:25,0:25:69.18:0,69,777	0/0:42,0:42:99:0,120,1383	0/0:22,1:23:32.77:0,33,603	0/0:25,0:25:57.16:0,57,648	0/0:13,0:13:24.07:0,24,277	0/0:26,0:26:44.83:0,45,769	0/0:20,0:20:54.16:0,54,623	1/1:2,16:18:39.02:357,39,0	0/0:26,0:26:72.20:0,72,822	0/0:33,0:33:87.21:0,87,980	0/0:22,0:22:60.16:0,60,681	0/0:40,0:40:99:0,105,1179	0/0:17,0:17:48.14:0,48,554	0/0:11,0:11:30.09:0,30,346	0/0:25,0:25:75.21:0,75,856	0/0:38,0:38:99:0,102,1177	0/0:34,0:34:96.27:0,96,1097	0/0:5,0:5:15.04:0,15,173
chr10	101442629	.	CTT	C	3962.20	PASS	AB=0.722;AC=23;AF=0.411;AN=56;BaseQRankSum=8.349;DP=608;FS=9.087;HRun=13;HaplotypeScore=85.1428;InbreedingCoeff=0.7987;MQ=59.89;MQ0=6;MQRankSum=0.944;QD=14.25;ReadPosRankSum=3.357;VQSLOD=2.2198;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,21:30:50.42:459,50,0	1/1:3,8:10:24:233,24,0	0/1:11,1:7:4.15:4,0,60	0/0:6,0:5:5.03:0,5,49	0/0:24,1:28:30.10:0,30,668	0/0:15,0:15:39.12:0,39,541	0/0:15,0:15:36.11:0,36,501	1/1:14,10:24:28.77:266,29,0	0/0:14,0:13:33.11:0,33,473	0/0:23,0:25:59.07:0,59,725	0/0:20,0:24:61.96:0,62,706	0/0:10,0:25:14.16:0,14,136	0/1:6,1:19:19.25:19,0,89	0/0:8,0:19:30.06:0,30,323	1/1:6,15:22:26.89:361,27,0	1/1:11,19:31:47.72:448,48,0	0/0:24,0:25:67.02:0,67,901	0/0:5,0:18:35.45:0,35,141	0/1:6,6:12:3.85:154,0,4	1/1:9,18:27:62.13:571,62,0	1/1:3,14:17:36.03:349,36,0	0/0:23,0:27:57.08:0,57,717	0/0:28,0:30:74.99:0,75,889	0/0:24,0:25:65.13:0,65,828	0/0:29,0:31:72.19:0,72,944	1/1:11,13:23:32.83:310,33,0	1/1:5,26:30:66.96:642,67,0	1/1:7,7:14:14.98:145,15,0
chr10	101444065	.	G	GGCACTCA	1094.28	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.734;DP=652;FS=0.000;HRun=0;HaplotypeScore=152.4590;InbreedingCoeff=0.9964;MQ=72.93;MQ0=0;MQRankSum=-5.382;QD=72.95;ReadPosRankSum=0.613;VQSLOD=3.8456;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,3127	0/0:9,0:9:27.09:0,27,724	0/0:26,0:26:75.26:0,75,1863	0/0:33,0:33:81.26:0,81,1967	0/0:24,0:24:72.23:0,72,1855	0/0:28,0:28:84.27:0,84,2208	0/0:25,0:25:75.24:0,75,1851	0/0:25,0:25:69.21:0,69,1621	0/0:25,0:25:72.25:0,72,1942	0/0:22,0:23:66.23:0,66,1730	0/0:25,0:25:75.26:0,75,1989	0/0:18,0:18:51.16:0,51,1298	0/0:17,0:17:45.15:0,45,1213	0/0:23,0:23:66.23:0,66,1728	0/0:14,0:14:42.14:0,42,1112	0/0:26,0:26:75.26:0,75,1996	0/0:27,0:27:75.24:0,75,1925	1/1:2,9:15:30.10:1189,30,0	0/0:22,0:22:60.19:0,60,1562	0/0:27,0:27:81.27:0,81,2044	0/0:29,0:29:87.30:0,87,2305	0/0:20,0:20:57.20:0,57,1520	0/0:25,0:25:75.26:0,75,2009	0/0:21,0:21:57.20:0,57,1483	0/0:16,0:16:48.16:0,48,1294	0/0:33,0:33:96.32:0,96,2480	0/0:26,0:26:78.27:0,78,1987	0/0:8,0:8:24.08:0,24,612
chr10	101444826	.	GT	G	876.90	PASS	AB=0.884;AC=9;AF=0.161;AN=56;BaseQRankSum=8.500;DP=422;FS=14.858;HRun=11;HaplotypeScore=61.9536;InbreedingCoeff=0.5520;MQ=73.67;MQ0=1;MQRankSum=0.318;QD=9.96;ReadPosRankSum=1.024;VQSLOD=1.0285;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:11:22.89:0,23,120	0/1:1,1:9:1.48:1,0,95	0/0:13,0:9:11.81:0,12,121	0/0:12,0:11:4.11:0,4,32	0/0:16,0:16:42.10:0,42,442	0/0:21,0:21:51.13:0,51,541	0/0:14,2:16:8.44:0,8,295	0/0:23,1:24:23.45:0,23,440	0/1:9,1:10:3.11:3,0,171	0/0:13,1:14:2.41:0,2,225	0/0:21,0:22:63.03:0,63,654	1/1:2,22:24:59.93:492,60,0	1/1:3,15:18:44.94:369,45,0	0/0:12,0:12:24.02:0,24,243	0/0:12,0:12:26.98:0,27,263	0/0:6,0:18:31.48:0,31,175	0/0:12,1:13:11.39:0,11,305	1/1:6,5:11:14.97:123,15,0	0/1:13,3:16:34.83:35,0,269	0/0:27,0:27:69.06:0,69,705	0/0:11,0:11:12.02:0,12,120	0/0:12,0:12:36.09:0,36,384	0/0:13,1:14:5.43:0,5,260	0/0:5,0:5:15.04:0,15,160	0/0:18,0:18:48.06:0,48,492	0/0:16,0:16:45.11:0,45,480	0/0:19,0:19:48.04:0,48,487	0/0:7,0:7:21.03:0,21,215
chr10	101444897	.	CTGTG	C	2707.10	PASS	AB=0.929;AC=19;AF=0.352;AN=54;BaseQRankSum=2.825;DP=350;FS=7.152;HRun=0;HaplotypeScore=74.3407;InbreedingCoeff=0.8043;MQ=61.69;MQ0=11;MQRankSum=-1.221;QD=18.67;ReadPosRankSum=2.798;VQSLOD=2.5291;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:12.69:0,13,159	0/0:3,0:3:9.03:0,9,143	0/0:42,0:16:14.26:0,14,481	0/0:37,0:17:31.70:0,32,496	0/0:10,0:10:27.09:0,27,526	0/0:4,0:4:12.04:0,12,290	0/0:5,0:5:15.05:0,15,297	1/1:11,2:13:30.10:502,30,0	0/0:8,0:8:24.08:0,24,574	0/0:12,0:11:30.10:0,30,654	0/0:13,0:12:27.09:0,27,649	1/1:7,0:13:15.76:118,16,0	0/1:12,0:12:31.77:32,0,46	0/0:10,0:9:22.86:0,23,300	1/1:3,13:15:21.07:375,21,0	0/0:10,0:10:20.59:0,21,300	0/0:10,0:9:18.06:0,18,362	1/1:9,0:9:0.64:17,1,0	1/1:0,9:9:27.09:466,27,0	1/1:0,22:22:5.97:74,6,0	1/1:5,5:7:6.02:110,6,0	0/0:5,0:5:8.61:0,9,147	0/0:10,0:10:30.10:0,30,632	0/0:7,0:6:18.06:0,18,359	0/0:8,0:8:18.06:0,18,440	1/1:2,17:19:51.16:827,51,0	1/1:3,18:21:20.96:383,21,0	./.
chr10	101445116	.	GTGA	G	52.02	PASS	AB=0.625;AC=1;AF=0.018;AN=56;BaseQRankSum=4.509;DP=827;FS=6.300;HRun=0;HaplotypeScore=120.0872;InbreedingCoeff=-0.0182;MQ=76.05;MQ0=0;MQRankSum=-0.662;QD=5.20;ReadPosRankSum=-0.790;VQSLOD=2.1761;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,2583	0/0:9,0:9:27.09:0,27,587	0/0:31,0:31:71.85:0,72,1553	0/0:32,0:32:44.20:0,44,1395	0/0:22,0:22:57.20:0,57,1248	0/0:26,0:26:78.27:0,78,1721	0/0:24,0:24:72.25:0,72,1586	0/0:38,0:38:99:0,99,2130	0/0:40,0:40:99:0,108,2341	0/0:22,0:22:63.22:0,63,1390	0/0:14,0:14:39.13:0,39,857	0/0:34,0:34:96.33:0,96,2098	0/0:44,0:44:99:0,129,2835	0/0:44,0:44:99:0,120,2600	0/0:50,0:50:99:0,144,3136	0/0:36,0:36:99:0,102,2233	0/0:34,0:34:99:0,102,2208	0/1:4,6:8:99:126,0,181	0/0:25,0:25:72.25:0,72,1552	0/0:24,0:24:72.25:0,72,1582	0/0:56,1:57:99:0,151,3289	0/0:15,0:15:39.13:0,39,861	0/0:28,0:28:66.23:0,66,1420	0/0:33,0:33:96.33:0,96,2093	0/0:16,0:16:45.15:0,45,992	0/0:40,0:40:99:0,114,2501	0/0:27,0:27:69.24:0,69,1518	0/0:10,0:10:30.10:0,30,662
chr10	101445997	.	AG	A	606.39	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.471;DP=557;FS=0.000;HRun=2;HaplotypeScore=52.4486;InbreedingCoeff=0.9977;MQ=78.40;MQ0=0;MQRankSum=-0.467;QD=30.32;ReadPosRankSum=2.614;VQSLOD=3.1094;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:42.13:0,42,610	0/0:11,0:11:30.10:0,30,450	0/0:11,0:11:33.10:0,33,442	0/0:14,0:14:42.14:0,42,598	0/0:28,0:28:81.27:0,81,1205	0/0:24,0:24:69.23:0,69,1031	0/0:16,0:16:48.14:0,48,680	0/0:37,0:37:99:0,108,1546	0/0:17,0:17:48.16:0,48,719	0/0:21,0:21:57.19:0,57,854	0/0:18,0:18:51.17:0,51,761	0/0:20,0:20:60.19:0,60,881	0/0:24,0:24:72.24:0,72,1078	0/0:23,0:23:69.23:0,69,1034	0/0:23,0:23:69.23:0,69,1034	0/0:25,0:25:75.25:0,75,1124	0/0:29,0:29:81.27:0,81,1214	1/1:1,19:20:54.18:701,54,0	0/0:17,0:17:48.13:0,48,689	0/0:23,0:23:66.21:0,66,969	0/0:13,0:13:39.13:0,39,584	0/0:22,0:22:60.20:0,60,898	0/0:14,0:14:36.12:0,36,539	0/0:9,0:9:27.05:0,27,379	0/0:16,0:16:45.15:0,45,673	0/0:21,0:21:60.19:0,60,876	0/0:36,0:36:99:0,108,1605	0/0:11,0:11:33.11:0,33,491
chr10	101447433	.	A	AGAGAGTGTGT	6693.22	PASS	AB=1.000;AC=21;AF=0.389;AN=54;BaseQRankSum=-4.337;DP=657;FS=22.439;HRun=0;HaplotypeScore=177.6097;InbreedingCoeff=0.8524;MQ=55.38;MQ0=28;MQRankSum=-6.361;QD=28.01;ReadPosRankSum=-5.139;VQSLOD=1.7550;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,0:15:8.97:387,9,0	0/0:42,0:10:23.10:0,23,342	0/0:51,0:15:4.72:0,5,405	0/0:23,0:23:60.20:0,60,1455	0/0:15,0:17:39.12:0,39,758	0/0:21,0:21:50.89:0,51,1058	1/1:27,0:26:75.19:1201,75,0	0/0:10,0:22:47.68:0,48,1058	0/0:19,0:21:63.07:0,63,1238	0/0:28,0:27:78.21:0,78,1648	0/0:9,0:17:34.93:0,35,740	0/0:7,0:19:48.16:0,48,1047	0/1:16,0:14:20.69:21,0,368	1/1:2,0:32:9.03:216,9,0	1/1:6,0:29:34.90:1217,35,0	0/0:25,0:30:49.02:0,49,1715	0/0:18,0:17:7.94:0,8,629	1/1:7,8:15:38.20:768,38,0	1/1:4,14:29:5.94:41,6,0	1/1:24,1:23:36.59:584,37,0	0/0:13,0:13:29.13:0,29,613	0/0:16,0:16:45.13:0,45,902	0/0:31,0:34:71.23:0,71,1711	0/0:17,0:17:42.13:0,42,914	1/1:4,15:21:26.48:1188,26,0	1/1:3,13:20:15.05:801,15,0	1/1:6,0:5:13.60:270,14,0
chr10	101448074	.	TAC	T	4682.39	PASS	AB=0.865;AC=24;AF=0.429;AN=56;BaseQRankSum=8.686;DP=654;FS=4.054;HRun=0;HaplotypeScore=87.5224;InbreedingCoeff=0.7052;MQ=63.53;MQ0=5;MQRankSum=0.231;QD=15.10;ReadPosRankSum=2.382;VQSLOD=4.3686;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,99,1380	0/0:7,0:7:21.07:0,21,318	0/0:31,0:20:18.04:0,18,235	0/1:33,1:16:23.13:23,0,118	0/0:29,1:30:31.07:0,31,927	0/0:21,0:21:49.41:0,49,751	0/1:22,2:24:19.21:19,0,600	1/1:18,10:28:27.07:306,27,0	0/0:23,1:24:25.06:0,25,830	0/0:27,0:27:57.19:0,57,876	0/0:16,0:16:36.12:0,36,562	1/1:1,17:18:42.12:492,42,0	1/1:1,24:25:72.21:844,72,0	0/0:7,0:20:35.99:0,36,313	1/1:3,18:22:50.98:577,51,0	0/0:23,0:23:63.11:0,63,957	0/1:23,1:24:10.12:10,0,761	1/1:6,0:17:11.02:75,11,0	1/1:6,9:15:26.74:283,27,0	1/1:7,16:23:48.04:519,48,0	1/1:7,18:25:36.11:422,36,0	0/0:17,0:17:30.09:0,30,450	0/0:9,0:20:27.01:0,27,267	0/0:6,0:24:51.02:0,51,505	0/0:36,1:37:64.13:0,64,1426	0/1:8,15:23:42.42:456,0,42	1/1:4,13:18:41.39:501,41,0	1/1:9,4:14:14.87:155,15,0
chr10	101449049	.	ATGTG	A	7025.70	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=7.225;DP=606;FS=5.835;HRun=0;HaplotypeScore=109.7747;InbreedingCoeff=0.9569;MQ=66.35;MQ0=4;MQRankSum=-3.368;QD=34.27;ReadPosRankSum=0.636;VQSLOD=4.8370;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:28:60.13:0,60,270	0/0:7,0:14:19.21:0,19,87	0/0:27,0:20:30.06:0,30,666	0/0:20,0:16:31.86:0,32,613	0/0:29,0:29:66.23:0,66,1618	0/0:20,0:21:53.91:0,54,1220	0/0:19,0:20:47.90:0,48,1111	1/1:7,17:24:51.17:834,51,0	0/0:11,0:11:30.10:0,30,716	0/0:23,0:23:45.15:0,45,1070	0/0:13,0:13:36.12:0,36,850	0/0:24,0:24:63.22:0,63,1495	0/0:24,0:24:57.20:0,57,1400	0/0:3,0:14:27.45:0,27,124	1/1:4,18:21:45.15:756,45,0	0/0:3,0:15:24.70:0,25,112	0/0:15,0:15:21.07:0,21,521	0/0:3,0:17:45.15:0,45,793	1/1:11,11:22:30.06:449,30,0	1/1:4,24:28:69.23:1158,69,0	1/1:7,21:28:54.18:907,54,0	0/0:13,0:13:27.09:0,27,670	0/0:19,0:19:51.17:0,51,1183	0/0:16,0:16:42.13:0,42,991	0/0:33,0:36:83.76:0,84,1904	1/1:6,25:31:0.81:1108,1,0	1/1:6,19:25:51.17:856,51,0	1/1:2,23:23:57.19:957,57,0
chr10	101449776	.	GA	G	235.80	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=2.742;DP=474;FS=9.779;HRun=8;HaplotypeScore=75.7045;InbreedingCoeff=0.7524;MQ=42.12;MQ0=21;MQRankSum=-2.335;QD=8.73;ReadPosRankSum=1.504;VQSLOD=1.0230;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:48.07:0,48,537	0/0:8,0:8:17.84:0,18,194	./.	./.	0/0:14,0:14:24.07:0,24,288	0/0:25,0:23:48.10:0,48,552	0/0:26,0:25:39.36:0,39,410	0/0:19,0:18:51.02:0,51,552	0/0:20,0:20:31.54:0,32,305	0/0:22,0:20:47.48:0,47,536	0/0:19,1:18:27.08:0,27,326	0/0:6,0:6:12.02:0,12,132	0/0:13,0:10:21.49:0,21,220	1/1:3,5:6:9:81,9,0	0/0:17,0:17:25.27:0,25,277	0/0:17,0:17:21.52:0,22,244	0/0:23,2:23:17.34:0,17,429	1/1:11,8:17:0.18:252,0,0	0/0:22,0:21:42.03:0,42,460	0/0:21,0:20:43.95:0,44,511	0/0:10,0:10:15.04:0,15,171	0/0:21,0:19:37.36:0,37,438	0/0:20,0:20:36.10:0,36,424	0/0:23,2:25:11.68:0,12,349	0/0:15,0:15:18.05:0,18,208	0/0:21,0:20:45.08:0,45,507	0/0:17,0:16:39.88:0,40,400	0/0:10,0:8:21.05:0,21,242
chr10	101450718	.	TCACACACA	T	3488.70	PASS	AB=0.667;AC=21;AF=0.389;AN=54;BaseQRankSum=3.850;DP=606;FS=2.551;HRun=0;HaplotypeScore=159.5517;InbreedingCoeff=0.8372;MQ=69.70;MQ0=8;MQRankSum=-8.614;QD=17.44;ReadPosRankSum=1.070;VQSLOD=2.9306;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,3:28:8.65:130,9,0	1/1:7,6:13:15.05:339,15,0	0/0:41,0:22:3.01:0,3,41	0/0:34,0:19:12.04:0,12,243	0/0:16,0:16:24.06:0,24,503	0/0:26,0:27:26.99:0,27,1214	0/0:26,0:29:51.16:0,51,1505	1/1:23,0:22:8.52:105,9,0	0/0:14,0:15:21.05:0,21,694	0/0:25,0:25:33.99:0,34,925	0/0:18,0:21:30.10:0,30,806	0/1:6,0:12:13.77:14,0,80	0/0:9,0:20:20.91:0,21,214	0/0:25,0:24:57.20:0,57,1642	1/1:10,11:21:18.06:455,18,0	1/1:2,12:15:23.37:517,23,0	0/0:27,0:30:57.03:0,57,1791	0/0:24,0:23:42.04:0,42,1020	1/1:15,1:16:14.41:250,14,0	./.	1/1:30,0:29:5.88:86,6,0	0/0:10,0:11:12.04:0,12,344	0/0:17,0:18:30.10:0,30,815	0/0:38,0:41:74.93:0,75,2430	0/0:14,0:16:36.12:0,36,1191	1/1:9,3:13:27.09:546,27,0	1/1:10,10:22:36.12:838,36,0	1/1:0,4:5:9.03:208,9,0
chr10	101450754	.	A	ACACT	827.83	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=4.562;DP=630;FS=2.487;HRun=0;HaplotypeScore=143.4826;InbreedingCoeff=0.5969;MQ=57.48;MQ0=19;MQRankSum=-0.720;QD=16.56;ReadPosRankSum=2.277;VQSLOD=3.6928;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:29.96:0,30,279	0/0:11,0:11:21.02:0,21,219	0/0:40,0:21:33.13:0,33,406	0/0:46,0:23:56.98:0,57,537	0/0:15,0:15:21.28:0,21,289	0/0:27,0:27:77.55:0,78,858	0/0:23,0:23:60.57:0,61,815	0/0:16,0:15:41.93:0,42,360	0/0:23,0:23:60:0,60,653	0/0:19,0:19:39.07:0,39,473	0/0:12,0:12:23.64:0,24,298	0/0:16,0:16:42.02:0,42,414	0/0:27,0:26:48.01:0,48,463	0/1:28,0:28:53.05:345,0,53	0/0:25,0:25:54.02:0,54,525	0/0:17,0:17:24.49:0,24,231	0/0:25,0:24:18.46:0,18,761	1/1:3,16:22:24.55:588,25,0	0/0:16,0:16:31.95:0,32,293	0/0:10,0:10:11.99:0,12,100	0/0:45,0:45:83.21:0,83,671	0/0:7,0:7:18.02:0,18,216	0/0:16,0:16:29.97:0,30,355	0/0:35,0:35:87.01:0,87,1225	0/0:23,0:23:54.52:0,55,677	0/0:24,0:24:71.98:0,72,669	0/0:25,0:25:11.12:0,11,429	0/0:8,0:8:15.02:0,15,161
chr10	101450849	.	T	TA	6333.21	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-9.155;DP=558;FS=17.759;HRun=6;HaplotypeScore=59.2437;InbreedingCoeff=0.9755;MQ=71.87;MQ0=0;MQRankSum=-1.762;QD=31.35;ReadPosRankSum=-0.481;VQSLOD=3.0581;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.13:0,69,696	0/0:5,0:5:12.03:0,12,122	0/0:15,0:15:20.52:0,21,200	0/0:18,0:17:33:0,33,314	0/0:21,0:21:60.12:0,60,605	0/0:31,0:31:87.20:0,87,888	0/0:15,0:15:33.07:0,33,336	1/1:6,20:26:60.17:729,60,0	0/0:21,0:21:57.13:0,57,581	0/0:25,0:25:57.12:0,57,581	0/0:26,0:26:75.16:0,75,759	0/0:14,0:14:42.09:0,42,428	0/0:11,0:11:30.06:0,30,306	1/1:2,9:11:30.10:377,30,0	1/1:2,24:26:63.20:793,63,0	0/0:19,0:19:51.10:0,51,513	0/0:21,0:21:54.12:0,54,550	1/1:3,18:21:54.15:663,54,0	1/1:4,12:16:36.12:453,36,0	1/1:3,17:20:51.13:625,51,0	1/1:2,14:16:39.12:491,39,0	0/0:17,0:17:45.10:0,45,459	0/0:21,0:21:57.11:0,57,575	0/0:21,0:21:51.11:0,51,520	0/0:29,0:29:81.16:0,81,813	1/1:3,20:23:4.98:694,5,0	1/1:3,30:33:90.29:1132,90,0	1/1:0,10:10:30.10:377,30,0
chr10	101450869	.	T	TCC	287.21	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.196;DP=544;FS=14.239;HRun=8;HaplotypeScore=88.3222;InbreedingCoeff=0.7563;MQ=77.33;MQ0=0;MQRankSum=-2.278;QD=23.93;ReadPosRankSum=-1.688;VQSLOD=1.1683;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.16:0,60,669	0/0:2,0:2:3.01:0,3,33	0/0:16,0:16:15.77:0,16,282	0/0:14,0:13:6.41:0,6,197	0/0:25,0:25:75.19:0,75,827	0/0:30,0:30:84.21:0,84,935	0/0:10,0:10:18.04:0,18,201	0/0:28,0:28:60.11:0,60,651	0/0:18,0:18:51.11:0,51,558	0/0:24,0:24:66.17:0,66,735	0/0:24,0:24:57.14:0,57,635	0/0:14,0:14:36.05:0,36,388	0/0:13,0:13:33.05:0,33,357	1/1:5,7:12:24.08:380,24,0	0/0:27,0:27:57.10:0,57,635	0/0:18,0:18:45.11:0,45,502	0/0:23,0:23:45.08:0,45,502	0/0:21,0:21:21.78:0,22,279	0/0:15,0:15:33.06:0,33,368	0/0:18,0:18:54.15:0,54,601	0/0:15,0:15:39.09:0,39,425	0/0:18,0:18:45.11:0,45,499	0/0:24,0:24:69.17:0,69,760	0/0:15,0:15:42.11:0,42,468	0/0:29,0:29:78.19:0,78,869	0/0:25,0:25:63.16:0,63,702	0/0:32,0:32:72.14:0,72,790	0/0:11,0:11:15.03:0,15,167
chr10	101450933	.	GA	G	1056.61	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.941;DP=576;FS=6.903;HRun=8;HaplotypeScore=61.4978;InbreedingCoeff=0.9378;MQ=73.45;MQ0=1;MQRankSum=-0.995;QD=23.48;ReadPosRankSum=1.680;VQSLOD=4.3707;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:51.16:0,51,616	0/0:5,0:5:15.05:0,15,181	0/0:14,0:13:8.96:0,9,125	0/0:11,0:9:12.46:0,12,121	0/0:29,0:29:87.27:0,87,1051	0/0:25,0:25:75.23:0,75,906	0/0:10,0:10:30.09:0,30,362	0/0:26,0:26:66.16:0,66,781	0/0:25,0:25:75.17:0,75,859	0/0:30,0:30:87.25:0,87,1035	0/0:28,0:28:75.21:0,75,885	0/0:13,0:13:36.11:0,36,435	0/0:19,0:19:54.17:0,54,652	1/1:1,16:17:45.07:434,45,0	0/0:29,0:29:78.15:0,78,893	0/0:20,0:20:54.17:0,54,652	0/0:23,0:23:66.20:0,66,797	1/1:2,26:28:78.07:744,78,0	0/0:23,0:23:54.15:0,54,636	0/0:27,0:27:75.22:0,75,894	0/0:8,0:8:21.06:0,21,253	0/0:17,0:17:39.12:0,39,471	0/0:23,0:24:66.06:0,66,765	0/0:7,0:7:21.04:0,21,240	0/0:29,0:29:81.25:0,81,978	0/0:27,0:27:72.21:0,72,858	0/0:35,0:35:93.28:0,93,1111	0/0:5,0:5:15.05:0,15,181
chr10	101451364	.	TA	T	825.49	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=9.916;DP=670;FS=2.114;HRun=7;HaplotypeScore=74.6636;InbreedingCoeff=0.8257;MQ=82.16;MQ0=0;MQRankSum=-0.113;QD=15.01;ReadPosRankSum=-0.675;VQSLOD=3.5200;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,1764	0/0:11,0:11:33.10:0,33,401	0/0:20,0:20:26.18:0,26,228	0/1:17,0:17:4.80:5,0,150	0/0:28,0:28:80.58:0,81,946	0/0:18,0:18:48.15:0,48,601	0/0:30,0:30:84.27:0,84,1052	0/0:24,0:24:63.17:0,63,745	0/0:30,0:30:84.24:0,84,1026	0/0:21,0:21:63.18:0,63,761	0/0:19,0:19:54.17:0,54,676	0/0:18,1:19:23.58:0,24,596	0/0:27,0:27:78.22:0,78,940	1/1:4,18:22:50.98:519,51,0	0/0:29,0:29:78.23:0,78,952	0/0:21,0:21:54.15:0,54,654	0/0:29,0:29:81.22:0,81,987	1/1:1,15:16:42.09:427,42,0	0/0:32,0:32:81.24:0,81,991	0/0:23,0:23:66.19:0,66,802	0/0:35,0:35:99:0,99,1200	0/0:20,0:20:54.16:0,54,662	0/0:20,0:20:51.15:0,51,625	0/0:31,0:31:93.30:0,93,1164	0/0:24,0:24:72.13:0,72,845	0/0:22,0:22:54.15:0,54,645	0/0:21,0:21:57.17:0,57,699	0/0:12,0:12:33.11:0,33,413
chr10	101455399	.	GAC	G	581.63	PASS	AB=0.891;AC=17;AF=0.340;AN=50;BaseQRankSum=6.894;DP=440;FS=11.802;HRun=0;HaplotypeScore=96.2659;InbreedingCoeff=0.4103;MQ=35.72;MQ0=37;MQRankSum=-7.489;QD=3.13;ReadPosRankSum=-4.507;VQSLOD=-0.5452;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,9:19:0.14:0,0,0	1/1:2,1:1:3.01:33,3,0	./.	./.	0/0:23,0:21:6.02:0,6,106	0/0:19,0:18:24.43:0,24,363	0/0:29,0:24:32.85:0,33,511	1/1:28,6:29:20.84:262,21,0	0/0:12,0:11:29.81:0,30,440	0/0:19,0:14:38.92:0,39,526	0/0:13,0:10:12.01:0,12,155	0/1:21,2:20:9.41:26,0,9	0/1:10,0:9:13.84:24,0,14	0/1:10,0:10:0.02:0,0,0	1/1:14,0:10:1.62:4,2,0	0/1:6,5:10:9.97:45,0,10	0/0:20,0:15:11.08:0,11,399	0/1:11,0:8:2.02:2,0,125	1/1:12,1:10:12.24:108,12,0	0/0:9,1:7:0:0,0,0	0/0:16,1:12:6:0,6,68	0/0:16,0:13:11.99:0,12,184	0/0:11,0:9:13.78:0,14,163	0/0:46,0:43:69.21:0,69,1058	0/0:19,0:17:26.93:0,27,473	0/1:14,2:13:3.26:150,0,3	1/1:13,2:14:4.60:74,5,0	./.
chr10	101455401	.	C	CAG	202.40	PASS	AB=0.932;AC=10;AF=0.200;AN=50;BaseQRankSum=4.470;DP=450;FS=7.033;HRun=0;HaplotypeScore=102.4219;InbreedingCoeff=0.2569;MQ=35.80;MQ0=35;MQRankSum=-5.585;QD=1.84;ReadPosRankSum=-5.218;VQSLOD=-0.7337;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:18:0:0,0,0	1/1:2,0:1:2.84:14,3,0	./.	./.	0/0:25,0:23:6.02:0,6,82	0/0:19,0:18:33.11:0,33,451	0/0:29,0:24:30.02:0,30,408	0/0:42,0:37:13.77:0,14,243	0/0:11,0:11:30.10:0,30,410	0/0:20,0:14:39.13:0,39,525	0/0:13,0:10:12.04:0,12,160	0/0:23,0:20:5.09:0,5,40	0/0:10,0:9:2.68:0,3,6	0/1:10,0:10:0:0,0,0	0/1:10,3:10:0:0,0,0	0/0:11,0:10:4.35:0,4,31	0/0:20,0:15:27.05:0,27,333	0/0:6,0:8:12.02:0,12,140	0/1:14,1:12:50.17:100,0,50	1/1:11,0:8:0.94:2,1,0	0/0:17,0:11:5.99:0,6,63	0/0:16,0:13:12.04:0,12,154	0/0:11,0:9:11.93:0,12,159	0/0:44,0:41:68.60:0,69,923	0/0:19,0:18:29.78:0,30,363	0/1:18,0:15:34.52:91,0,35	0/1:13,3:15:39.88:100,0,40	./.
chr10	101455405	.	GAC	G	440.82	PASS	AB=0.977;AC=13;AF=0.260;AN=50;BaseQRankSum=6.268;DP=455;FS=10.375;HRun=0;HaplotypeScore=99.6297;InbreedingCoeff=0.0786;MQ=35.81;MQ0=35;MQRankSum=-7.754;QD=2.24;ReadPosRankSum=-2.761;VQSLOD=0.3628;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,1:18:0.14:0,0,0	1/1:2,0:1:3.01:32,3,0	./.	./.	0/0:24,0:22:6.02:0,6,116	0/0:19,0:18:33.11:0,33,611	0/0:27,0:23:30.06:0,30,510	0/1:51,0:45:99:197,0,377	0/0:11,0:11:30.10:0,30,577	0/0:19,0:14:42.14:0,42,794	0/0:14,0:11:12.04:0,12,222	0/1:21,2:20:22.61:23,0,51	0/1:10,0:9:24.97:25,0,29	0/1:10,0:10:0.03:0,0,0	1/1:14,0:11:1.62:4,2,0	0/1:9,1:9:7.11:56,0,7	0/0:18,0:14:33.09:0,33,575	0/0:9,0:7:8.57:0,9,142	0/1:16,0:12:90.33:90,0,96	0/0:11,0:8:0:0,0,0	0/0:17,0:11:5.99:0,6,80	0/0:15,0:12:12.04:0,12,204	0/0:10,0:8:12.04:0,12,224	0/0:44,0:41:72.24:0,72,1347	0/0:20,0:19:29.30:0,29,466	0/1:20,0:17:64.03:111,0,64	0/1:16,0:15:31.75:32,0,48	./.
chr10	101455407	.	CAGAGACAG	C	306.68	PASS	AB=1.000;AC=10;AF=0.208;AN=48;BaseQRankSum=3.968;DP=461;FS=0.000;HRun=0;HaplotypeScore=132.2263;InbreedingCoeff=0.6050;MQ=35.96;MQ0=36;MQRankSum=-4.079;QD=3.37;ReadPosRankSum=-0.970;VQSLOD=2.1397;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:18:0.35:0,0,0	./.	./.	./.	0/0:24,0:22:12.04:0,12,215	0/0:19,0:18:33.11:0,33,1111	0/0:26,0:23:24.55:0,25,603	0/0:57,0:52:99:0,126,1273	0/0:12,0:12:33.11:0,33,1065	0/0:19,0:14:42.11:0,42,1233	0/0:14,0:11:9.03:0,9,174	1/1:17,6:20:11.79:151,12,0	1/1:8,2:9:8.94:160,9,0	0/0:3,0:10:3.48:0,3,33	1/1:14,0:11:2.90:7,3,0	1/1:10,0:9:5.81:75,6,0	0/0:16,0:13:30.10:0,30,918	0/1:9,0:7:44.20:44,0,53	0/0:18,0:14:20.39:0,20,234	0/0:11,0:8:0.47:0,0,1	0/0:16,0:11:3.01:0,3,128	0/0:15,0:12:11.99:0,12,207	0/0:11,0:9:12.04:0,12,311	0/0:43,0:40:65.86:0,66,2275	0/0:18,0:17:24.08:0,24,534	0/0:19,0:17:31.52:0,32,474	0/0:16,0:17:23.92:0,24,376	./.
chr10	101455413	.	CAG	C	89.46	PASS	AB=0.826;AC=8;AF=0.160;AN=50;BaseQRankSum=4.202;DP=461;FS=0.000;HRun=0;HaplotypeScore=106.7298;InbreedingCoeff=0.3038;MQ=35.86;MQ0=35;MQRankSum=-3.679;QD=0.99;ReadPosRankSum=-0.704;VQSLOD=1.8207;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,10:17:0:0,0,0	0/0:2,0:1:0:0,0,0	./.	./.	0/0:24,0:21:12.04:0,12,195	0/0:17,0:15:33.11:0,33,586	0/0:22,0:19:24.08:0,24,426	0/0:66,0:61:99:0,171,2177	0/0:13,0:13:36.12:0,36,632	0/0:17,0:14:42.11:0,42,690	0/0:15,0:13:9.03:0,9,157	0/1:16,7:20:16.98:55,0,17	0/1:8,2:9:17.79:57,0,18	0/0:9,0:9:3.01:0,3,49	1/1:15,0:12:1.62:4,2,0	1/1:4,5:8:6.02:77,6,0	0/0:15,0:12:30.10:0,30,525	0/1:9,0:7:4.41:4,0,74	0/0:19,0:14:37.45:0,37,371	0/0:11,0:8:3.01:0,3,46	0/0:15,0:10:3.01:0,3,53	0/0:14,0:11:11.99:0,12,179	0/0:11,0:9:12.04:0,12,212	0/0:43,0:40:77.68:0,78,1336	0/0:16,0:15:24.08:0,24,412	0/0:23,0:20:37.91:0,38,514	0/0:19,0:18:24.50:0,25,338	./.
chr10	101455455	.	CAG	C	542.07	PASS	AB=0.767;AC=18;AF=0.333;AN=54;BaseQRankSum=9.521;DP=440;FS=3.973;HRun=0;HaplotypeScore=104.7540;InbreedingCoeff=0.7025;MQ=47.25;MQ0=21;MQRankSum=-9.190;QD=3.21;ReadPosRankSum=3.182;VQSLOD=1.8608;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:2.18:7,2,0	0/0:4,0:4:2.98:0,3,21	0/0:15,0:10:25.88:0,26,342	0/0:13,0:8:21.05:0,21,316	0/0:23,0:20:24.06:0,24,406	0/0:20,0:19:45.13:0,45,736	0/0:19,0:18:26.95:0,27,366	1/1:21,0:17:6:51,6,0	0/0:14,0:14:39.13:0,39,671	0/0:24,0:23:60.19:0,60,979	0/0:16,0:16:18.06:0,18,311	1/1:22,0:21:6.74:21,7,0	1/1:15,0:15:11.32:39,11,0	0/0:11,0:11:11.82:0,12,125	0/1:10,6:14:0:0,0,0	1/1:11,0:10:6.59:21,7,0	0/0:20,1:19:45.15:0,45,769	0/0:16,0:15:29.91:0,30,522	1/1:14,1:10:4.53:84,5,0	0/0:1,2:3:0:0,0,0	1/1:5,2:4:3.01:40,3,0	0/0:15,0:13:24.08:0,24,413	0/0:12,0:11:24.08:0,24,404	0/0:33,0:31:63.08:0,63,1077	0/0:8,0:8:12.04:0,12,202	1/1:27,1:24:43.43:272,43,0	0/1:16,5:20:7.15:176,0,7	./.
chr10	101455457	.	GAGAGAGAC	G	2463.85	PASS	AB=0.611;AC=21;AF=0.375;AN=56;BaseQRankSum=9.558;DP=435;FS=2.815;HRun=0;HaplotypeScore=126.5921;InbreedingCoeff=0.6982;MQ=47.58;MQ0=20;MQRankSum=-9.503;QD=14.49;ReadPosRankSum=2.498;VQSLOD=2.7834;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:2.35:12,2,0	0/0:4,0:4:2.90:0,3,16	0/0:17,0:11:30.20:0,30,721	0/0:14,0:8:21.07:0,21,585	0/0:23,0:21:27.08:0,27,935	0/0:20,0:19:45.13:0,45,1428	0/0:19,0:18:27.47:0,27,726	1/1:17,0:13:6.02:127,6,0	0/0:13,0:13:39.13:0,39,1457	0/0:22,0:21:60.20:0,60,1907	0/0:14,0:14:18.06:0,18,650	1/1:22,0:21:8.12:36,8,0	1/1:15,0:15:3.12:56,3,0	0/0:11,0:11:4.91:0,5,78	1/1:7,9:14:0.92:2,1,0	1/1:11,0:10:8.30:39,8,0	0/0:21,0:19:45.15:0,45,1638	0/0:17,0:15:17.82:0,18,1096	1/1:8,7:10:10.46:391,10,0	0/0:2,0:2:0.47:0,0,1	1/1:7,0:4:0.89:2,1,0	0/0:15,0:13:24.08:0,24,872	0/0:13,0:12:27.09:0,27,912	0/0:32,0:30:63.08:0,63,2032	0/0:8,0:8:12.04:0,12,314	1/1:10,18:24:51.55:1187,52,0	0/1:8,14:21:1.82:746,0,2	1/1:0,3:3:3.01:37,3,0
chr10	101455459	.	GAGAGAC	G	1861.36	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=9.190;DP=425;FS=0.000;HRun=0;HaplotypeScore=117.0350;InbreedingCoeff=0.7447;MQ=48.49;MQ0=17;MQRankSum=-9.284;QD=11.08;ReadPosRankSum=2.103;VQSLOD=2.6275;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,6:14:2.77:64,3,0	1/1:0,4:4:3.01:36,3,0	0/0:21,0:13:35.44:0,35,704	0/0:14,0:8:20.90:0,21,493	0/0:23,0:21:27.09:0,27,737	0/0:20,0:19:33.11:0,33,999	0/0:19,0:18:21.54:0,22,543	1/1:9,0:6:5.99:47,6,0	0/0:13,0:13:36.11:0,36,1118	0/0:22,0:21:48.16:0,48,1353	0/0:14,0:14:18.06:0,18,538	1/1:9,13:21:8.93:191,9,0	1/1:2,13:15:17.59:382,18,0	1/1:8,3:11:4.64:61,5,0	0/1:16,0:14:0:0,0,1	1/1:2,8:9:9.03:191,9,0	0/0:21,0:19:42.14:0,42,1288	0/0:17,0:15:27.03:0,27,940	1/1:14,0:10:13.28:164,13,0	0/0:2,0:2:0.47:0,0,1	0/0:6,0:4:3.01:0,3,31	0/0:13,0:11:24.08:0,24,731	0/0:13,0:12:27.09:0,27,675	0/0:31,0:30:45.15:0,45,1339	0/0:8,0:8:9.03:0,9,189	1/1:28,0:24:48:596,48,0	1/1:22,0:21:0.48:309,0,0	1/1:3,0:3:0.89:2,1,0
chr10	101455463	.	GAC	G	687.89	PASS	AB=0.962;AC=22;AF=0.393;AN=56;BaseQRankSum=9.869;DP=411;FS=0.000;HRun=0;HaplotypeScore=98.4425;InbreedingCoeff=0.7339;MQ=55.43;MQ0=15;MQRankSum=-8.604;QD=4.56;ReadPosRankSum=1.123;VQSLOD=2.3956;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,1:13:2.48:11,2,0	0/0:4,0:4:2.74:0,3,12	0/0:26,0:18:33.28:0,33,625	0/0:16,0:10:20.12:0,20,377	0/0:23,0:21:27.06:0,27,486	0/0:19,0:18:45.14:0,45,802	0/0:20,0:19:32.80:0,33,472	1/1:3,3:3:8.99:110,9,0	0/0:13,0:13:39.12:0,39,707	0/0:22,0:22:63.09:0,63,1074	0/0:15,0:15:24.04:0,24,388	1/1:18,0:18:8.03:33,8,0	1/1:15,0:15:13.44:62,13,0	0/1:11,1:12:11.22:11,0,60	0/1:16,0:14:0:0,0,0	1/1:10,0:9:7.88:32,8,0	0/0:23,0:21:54.10:0,54,895	0/0:16,0:15:36.02:0,36,632	1/1:10,0:8:17.57:106,18,0	0/0:2,0:2:0:0,0,0	1/1:6,0:4:3:25,3,0	0/0:11,0:9:24.08:0,24,463	0/0:12,0:11:27.08:0,27,482	0/0:29,0:28:66.21:0,66,1183	0/0:9,0:9:15.04:0,15,250	1/1:21,0:18:48.76:316,49,0	1/1:21,0:20:9.85:151,10,0	1/1:3,0:3:2.96:19,3,0
chr10	101455579	.	A	AAC	5310.65	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-10.716;DP=411;FS=10.966;HRun=0;HaplotypeScore=46.5096;InbreedingCoeff=0.8753;MQ=66.53;MQ0=1;MQRankSum=-1.233;QD=33.19;ReadPosRankSum=-2.420;VQSLOD=5.3499;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:39.12:0,39,484	0/0:2,0:2:6.02:0,6,74	0/1:16,0:13:21.64:22,0,282	0/0:20,0:18:27.08:0,27,318	0/0:19,0:19:51.16:0,51,632	0/0:9,0:9:27.07:0,27,324	0/0:11,0:11:21.07:0,21,260	1/1:12,16:29:51.57:747,52,0	0/0:19,0:19:42.13:0,42,521	0/0:13,0:13:39.11:0,39,474	0/0:14,0:14:39.12:0,39,483	0/0:12,0:12:33.04:0,33,368	0/0:12,0:12:30.09:0,30,372	0/0:14,0:14:42.13:0,42,520	1/1:2,12:14:33.11:541,33,0	0/0:9,0:9:18.06:0,18,223	0/0:17,0:18:50.99:0,51,607	0/0:21,0:21:8.81:0,9,519	1/1:2,14:17:45.14:710,45,0	1/1:5,18:22:16.98:796,17,0	1/1:2,14:16:45.15:738,45,0	0/0:5,0:5:12.04:0,12,149	0/0:9,0:9:18.06:0,18,223	0/0:10,0:10:30.08:0,30,359	0/0:16,0:16:48.14:0,48,582	1/1:3,18:21:54.18:876,54,0	1/1:4,15:18:42.14:686,42,0	1/1:1,4:5:12.04:195,12,0
chr10	101455761	.	A	AT	945.93	PASS	AB=0.988;AC=11;AF=0.196;AN=56;BaseQRankSum=-0.223;DP=442;FS=0.000;HRun=8;HaplotypeScore=67.1150;InbreedingCoeff=0.4101;MQ=67.32;MQ0=0;MQRankSum=-0.867;QD=6.66;ReadPosRankSum=-2.621;VQSLOD=0.0428;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:40.84:0,41,142	0/0:9,0:9:12.78:0,13,38	0/0:6,0:6:11.30:0,11,76	0/1:9,0:7:5.66:6,0,32	0/0:32,0:32:84:0,84,759	0/0:13,0:13:36.01:0,36,327	0/0:7,0:7:18:0,18,160	0/1:38,0:37:27.34:27,0,73	0/0:14,0:14:35.99:0,36,322	0/0:13,0:13:29.98:0,30,263	0/0:19,0:19:51:0,51,457	1/1:1,8:9:27.07:301,27,0	1/1:5,6:11:33.05:340,33,0	1/1:2,10:12:36.09:403,36,0	0/0:16,0:16:30.95:0,31,92	0/0:8,0:8:10.52:0,11,30	0/0:24,0:24:63.03:0,63,577	0/0:21,0:21:52.30:0,52,232	0/1:20,0:20:12.55:13,0,47	0/0:15,0:15:1.06:0,1,71	0/0:4,0:4:7.67:0,8,22	0/0:7,0:7:21.01:0,21,192	0/0:13,0:13:33:0,33,298	0/0:3,0:3:9:0,9,82	0/0:28,0:28:77.96:0,78,691	0/1:27,0:27:7.54:8,0,76	0/0:25,0:25:52.24:0,52,177	0/1:15,1:16:6.84:7,0,65
chr10	101455798	.	T	TA	2904.04	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=0.922;DP=443;FS=2.993;HRun=1;HaplotypeScore=60.0967;InbreedingCoeff=0.9081;MQ=77.19;MQ0=0;MQRankSum=-2.378;QD=34.17;ReadPosRankSum=1.118;VQSLOD=3.5574;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:63.21:919,63,0	1/1:0,11:11:24.04:350,24,0	0/0:16,0:16:44.06:0,44,465	0/1:5,0:4:8.09:8,0,31	0/0:30,0:30:84.25:0,84,1058	0/0:14,0:14:42.11:0,42,514	0/0:10,0:10:27.06:0,27,323	0/0:29,0:29:81.24:0,81,1015	0/0:12,0:12:36.10:0,36,452	0/0:13,0:13:36.08:0,36,429	0/0:21,0:21:63.17:0,63,758	1/1:2,12:14:42.14:601,42,0	1/1:1,9:10:27.09:392,27,0	1/1:2,8:10:30.10:429,30,0	0/0:17,0:17:48.15:0,48,611	1/1:0,10:10:27.09:394,27,0	0/0:24,0:24:72.19:0,72,890	0/0:17,0:17:45.12:0,45,561	0/0:18,0:18:54.14:0,54,670	0/0:12,0:12:36.12:0,36,462	0/0:8,0:8:24.08:0,24,311	0/0:10,0:10:30.08:0,30,366	0/0:12,0:12:33.10:0,33,415	0/0:5,0:5:15.05:0,15,194	0/0:22,0:22:66.20:0,66,830	0/0:26,0:26:78.25:0,78,1011	0/0:26,0:26:78.23:0,78,982	0/0:16,0:16:48.16:0,48,622
chr10	101456321	.	AT	A	2710.56	PASS	AB=0.919;AC=18;AF=0.321;AN=56;BaseQRankSum=8.002;DP=425;FS=4.413;HRun=10;HaplotypeScore=48.3917;InbreedingCoeff=0.8201;MQ=77.15;MQ0=0;MQRankSum=1.066;QD=16.73;ReadPosRankSum=-0.046;VQSLOD=3.8011;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.18:0,90,965	0/0:8,0:8:18.03:0,18,190	0/1:14,1:14:8.02:8,0,130	0/0:13,0:11:17.78:0,18,170	0/0:25,0:25:57.15:0,57,631	0/0:9,0:9:27.06:0,27,291	0/0:16,0:16:33.45:0,33,394	1/1:1,15:16:41.92:352,42,0	0/0:14,0:14:36.10:0,36,398	0/0:18,0:20:44.79:0,45,458	0/0:11,0:12:28.14:0,28,275	0/0:10,0:10:24.06:0,24,265	0/1:8,1:9:5:5,0,178	0/0:11,1:12:4.03:0,4,273	1/1:3,20:23:62.96:542,63,0	0/0:13,0:13:39.10:0,39,424	0/0:24,0:24:69.17:0,69,754	0/0:14,0:14:30.97:0,31,334	1/1:3,12:15:32.80:265,33,0	1/1:2,18:20:47.83:417,48,0	1/1:5,14:19:35.98:313,36,0	0/0:12,0:12:33.09:0,33,365	0/0:11,0:11:33.09:0,33,365	0/0:5,0:5:15.04:0,15,166	0/0:11,0:11:27.38:0,27,281	1/1:2,17:19:47.97:413,48,0	1/1:0,23:23:62.99:547,63,0	1/1:1,2:3:6:52,6,0
chr10	101456432	.	AAC	A	5242.04	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.734;DP=546;FS=9.916;HRun=0;HaplotypeScore=67.0698;InbreedingCoeff=0.9984;MQ=85.27;MQ0=0;MQRankSum=-0.323;QD=33.18;ReadPosRankSum=0.891;VQSLOD=6.2749;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:60.21:0,60,1039	0/0:7,0:7:21.07:0,21,364	0/0:15,0:15:29.57:0,30,423	0/0:22,0:21:50.14:0,50,704	0/0:20,0:20:57.18:0,57,955	0/0:20,0:20:57.20:0,57,981	0/0:20,0:20:48.16:0,48,824	1/1:4,29:33:84.20:1041,84,0	0/0:17,0:17:48.16:0,48,804	0/0:29,0:29:87.29:0,87,1475	0/0:20,0:20:57.20:0,57,974	0/0:10,0:10:30.09:0,30,491	0/0:16,0:16:42.14:0,42,727	0/0:22,0:22:60.21:0,60,1031	1/1:0,21:21:42.02:559,42,0	0/0:18,0:18:51.17:0,51,880	0/0:16,0:16:42.14:0,42,700	0/0:24,0:24:60.20:0,60,1003	1/1:3,16:19:48.13:607,48,0	1/1:0,22:22:66.22:879,66,0	1/1:4,13:17:36.12:479,36,0	0/0:24,0:24:72.23:0,72,1192	0/0:26,0:26:69.24:0,69,1180	0/0:18,0:18:45.15:0,45,769	0/0:18,0:18:51.16:0,51,854	1/1:1,18:19:54.18:719,54,0	1/1:1,19:20:51.17:679,51,0	1/1:0,7:7:21.07:280,21,0
chr10	101456942	.	CCTCTCTCT	C	433.72	PASS	AB=0.941;AC=7;AF=0.135;AN=52;BaseQRankSum=3.367;DP=631;FS=0.000;HRun=0;HaplotypeScore=136.6729;InbreedingCoeff=0.4766;MQ=69.24;MQ0=15;MQRankSum=-2.797;QD=5.63;ReadPosRankSum=-2.056;VQSLOD=2.0367;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:24.06:0,24,630	0/0:12,0:11:5.23:0,5,99	0/0:41,0:20:3.47:0,3,10	./.	0/0:27,0:32:15.73:0,16,558	0/0:23,0:23:24.07:0,24,565	0/0:26,0:27:15.05:0,15,480	0/0:29,0:29:4:0,4,11	0/0:14,0:20:5.51:0,6,335	0/0:15,0:17:15.02:0,15,186	0/0:17,0:17:11.94:0,12,127	0/0:18,0:18:6.02:0,6,222	0/0:16,0:20:15.05:0,15,370	0/0:26,0:25:6.02:0,6,227	1/1:17,4:22:9.03:205,9,0	0/0:15,0:16:24.08:0,24,722	0/0:11,0:22:15.05:0,15,478	0/0:13,0:14:9.01:0,9,124	./.	0/0:23,0:28:8.92:0,9,90	0/0:17,0:17:9.03:0,9,189	0/0:21,0:21:21.07:0,21,712	0/0:21,0:24:9.69:0,10,272	0/0:15,0:15:27.09:0,27,925	0/0:11,0:11:3.01:0,3,73	0/1:15,0:15:73.64:74,0,111	1/1:20,4:24:5.61:149,6,0	1/1:13,1:14:6.02:130,6,0
chr10	101460050	.	A	ACACA	2806.08	PASS	AB=1.000;AC=26;AF=0.481;AN=54;BaseQRankSum=-2.342;DP=717;FS=2.808;HRun=0;HaplotypeScore=122.7844;InbreedingCoeff=0.6492;MQ=67.57;MQ0=12;MQRankSum=-2.256;QD=8.53;ReadPosRankSum=-3.624;VQSLOD=1.9961;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:59,0:59:35.33:663,35,0	1/1:4,7:12:6.02:123,6,0	0/0:40,0:22:2.97:0,3,41	0/0:55,0:28:0.15:0,0,1	0/0:25,0:25:11.58:0,12,319	0/0:32,0:32:54.16:0,54,792	0/0:27,0:27:27.09:0,27,421	1/1:24,0:24:10.84:142,11,0	0/0:21,0:21:24.07:0,24,359	0/0:27,0:27:22.80:0,23,310	0/0:10,0:10:9.03:0,9,142	1/1:29,0:28:3.38:25,3,0	./.	1/1:23,0:23:3.01:46,3,0	1/1:21,0:21:18.06:371,18,0	1/1:17,0:17:20.72:500,21,0	0/0:34,0:34:23.19:0,23,355	0/0:26,0:26:37.66:0,38,561	1/1:17,0:17:10.28:116,10,0	1/1:16,0:16:6.02:124,6,0	1/1:26,0:23:3.01:72,3,0	0/0:22,0:22:30.08:0,30,447	0/1:24,0:24:13.27:13,0,396	0/0:36,0:34:29.86:0,30,434	0/0:20,0:20:26.84:0,27,426	0/1:24,0:23:17.52:374,0,18	1/1:25,0:23:22.83:385,23,0	1/1:12,0:12:3.01:45,3,0
chr10	101460444	.	AAAG	A	8162.44	PASS	AB=0.527;AC=15;AF=0.268;AN=56;BaseQRankSum=13.395;DP=676;FS=5.775;HRun=0;HaplotypeScore=98.2037;InbreedingCoeff=0.9085;MQ=85.59;MQ0=0;MQRankSum=-4.969;QD=48.59;ReadPosRankSum=0.680;VQSLOD=7.1326;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,181,4070	0/0:11,0:11:33.11:0,33,813	0/0:29,0:29:85.89:0,86,1826	0/0:24,0:24:65.36:0,65,1301	0/0:23,0:23:66.23:0,66,1623	0/0:25,0:25:75.25:0,75,1798	0/0:24,0:24:72.23:0,72,1677	1/1:0,33:33:96.29:1675,96,0	0/0:20,0:20:60.17:0,60,1426	0/0:24,0:24:72.25:0,72,1702	0/0:18,0:18:51.18:0,51,1257	0/0:22,0:22:66.23:0,66,1604	0/0:20,0:20:60.21:0,60,1452	0/0:15,0:15:45.15:0,45,1109	1/1:0,13:13:39.13:726,39,0	0/0:30,0:30:90.30:0,90,2139	0/0:30,0:30:90.30:0,90,2170	0/0:22,0:22:60.21:0,60,1477	1/1:0,15:15:45.14:791,45,0	1/1:1,16:17:48.16:875,48,0	1/1:0,26:26:57.20:1061,57,0	0/0:24,0:24:72.24:0,72,1710	0/0:21,0:21:60.16:0,60,1425	0/0:38,0:38:99:0,114,2635	0/0:28,0:28:84.29:0,84,2028	0/1:3,26:29:99:1248,0,116	1/1:0,27:27:72.16:1339,72,0	1/1:0,8:8:24.08:447,24,0
chr10	101461197	.	C	CT	617.20	PASS	AB=0.833;AC=8;AF=0.148;AN=54;BaseQRankSum=7.877;DP=596;FS=1.210;HRun=1;HaplotypeScore=84.3651;InbreedingCoeff=0.6150;MQ=55.43;MQ0=5;MQRankSum=0.831;QD=6.23;ReadPosRankSum=2.704;VQSLOD=0.7273;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:26:25.03:266,25,0	1/1:0,6:13:11.01:118,11,0	0/0:6,0:1:3.01:0,3,38	./.	0/0:28,0:27:81.27:0,81,1132	0/0:30,0:30:87.27:0,87,1193	0/0:19,1:20:10.76:0,11,674	0/0:37,0:36:99:0,102,1384	0/0:14,0:14:42.14:0,42,574	0/0:35,0:34:99:0,99,1385	0/0:28,0:28:84.25:0,84,1139	0/0:23,2:25:44.18:0,44,593	0/0:15,0:15:12.76:0,13,261	0/1:23,0:23:14.26:14,0,305	0/0:21,0:20:57.19:0,57,797	1/1:1,11:19:21.60:256,22,0	0/0:25,0:26:59.94:0,60,838	0/1:9,9:18:99:111,0,320	0/0:15,0:15:44.94:0,45,590	0/0:30,0:30:87.27:0,87,1198	0/0:15,0:15:45.13:0,45,607	0/0:23,0:23:66.20:0,66,903	0/0:22,0:21:63.21:0,63,881	0/0:6,1:7:15.05:0,15,210	0/0:19,0:19:4.74:0,5,250	0/0:32,0:32:96.32:0,96,1343	0/0:29,0:29:84.26:0,84,1149	0/0:15,0:14:42.11:0,42,568
chr10	101461201	.	T	TATC	159.19	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.159;DP=592;FS=3.646;HRun=0;HaplotypeScore=105.3391;InbreedingCoeff=0.7674;MQ=55.35;MQ0=5;MQRankSum=-2.198;QD=2.79;ReadPosRankSum=1.322;VQSLOD=2.0563;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,4:26:2.33:12,2,0	1/1:9,4:13:9.65:117,10,0	0/0:5,0:1:3:0,3,25	0/0:4,0:1:2.97:0,3,20	0/0:28,0:27:81.28:0,81,1337	0/0:27,0:27:72.23:0,72,1156	0/0:22,0:22:60.02:0,60,888	0/0:38,0:37:99:0,99,1578	0/0:14,0:14:39.13:0,39,636	0/0:34,0:33:96.32:0,96,1557	0/0:29,0:29:78.27:0,78,1290	0/0:25,0:25:45.15:0,45,740	0/0:14,0:14:36.12:0,36,591	0/0:23,0:23:29.93:0,30,717	0/0:22,0:21:57.18:0,57,915	1/1:14,0:18:10.10:147,10,0	0/0:25,0:25:57.11:0,57,869	0/0:18,0:18:30.79:0,31,493	0/0:15,0:15:42.12:0,42,668	0/0:31,0:31:90.29:0,90,1452	0/0:14,0:14:42.14:0,42,683	0/0:23,0:23:69.22:0,69,1098	0/0:23,0:22:66.23:0,66,1073	0/0:7,0:7:12.04:0,12,200	0/0:20,0:20:48.16:0,48,785	0/0:31,0:31:90.30:0,90,1467	0/0:29,0:29:81.26:0,81,1302	0/0:14,0:13:39.09:0,39,584
chr10	101464421	.	C	CAAA	3454.74	PASS	AB=0.859;AC=17;AF=0.304;AN=56;BaseQRankSum=-0.156;DP=488;FS=2.886;HRun=13;HaplotypeScore=82.6728;InbreedingCoeff=0.7378;MQ=51.42;MQ0=10;MQRankSum=-6.637;QD=18.88;ReadPosRankSum=-5.778;VQSLOD=1.2842;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:54.86:0,55,580	0/0:6,0:8:19.48:0,19,209	0/0:8,0:4:7.44:0,7,57	0/1:10,0:5:2.36:2,0,55	0/0:22,0:30:58.14:0,58,575	0/0:15,0:17:25.26:0,25,285	0/0:15,0:17:28.26:0,28,305	1/1:11,12:24:40.36:637,40,0	0/0:15,0:15:23.83:0,24,258	0/0:16,0:19:35.79:0,36,378	0/1:18,0:20:29.89:30,0,229	0/0:3,0:11:23.50:0,24,141	0/0:1,0:16:32.33:0,32,194	0/0:6,0:20:37.59:0,38,230	1/1:9,11:21:21.01:297,21,0	0/0:12,0:14:26.71:0,27,260	0/0:18,0:19:37.46:0,37,401	0/0:11,0:10:20.78:0,21,182	1/1:10,3:15:21.04:274,21,0	0/1:10,4:20:2.20:338,0,2	1/1:5,2:6:9.03:161,9,0	0/0:15,0:15:32.93:0,33,340	0/0:18,0:17:38.95:0,39,403	0/0:8,0:9:11.88:0,12,129	0/0:18,0:19:37.94:0,38,403	1/1:10,8:25:1.08:555,1,0	1/1:11,12:26:52.26:731,52,0	1/1:3,9:12:29.63:429,30,0
chr10	101466125	.	GACACACACACAC	G	899.76	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=3.904;DP=342;FS=0.964;HRun=0;HaplotypeScore=120.8144;InbreedingCoeff=0.6897;MQ=66.46;MQ0=15;MQRankSum=-2.270;QD=13.43;ReadPosRankSum=1.307;VQSLOD=2.5193;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:22:27.03:0,27,731	0/0:1,0:2:6:0,6,141	0/0:28,0:13:3:0,3,27	0/0:20,0:7:3:0,3,26	0/0:7,0:8:15.04:0,15,566	0/0:6,0:6:9:0,9,97	0/0:30,0:30:36.02:0,36,1128	1/1:9,3:12:9.01:91,9,0	0/0:10,0:13:18.01:0,18,262	0/0:13,0:13:21.03:0,21,485	0/0:13,0:13:15.05:0,15,844	0/0:9,0:13:16.41:0,16,435	0/0:5,0:6:8.98:0,9,140	0/0:7,0:11:17.97:0,18,349	1/1:8,2:10:7.59:348,8,0	0/0:7,0:10:17.94:0,18,325	0/0:17,0:17:24.03:0,24,1019	0/0:9,0:9:24.02:0,24,677	0/1:9,0:7:11.58:15,0,12	1/1:4,7:11:9.03:299,9,0	1/1:7,0:7:5.99:50,6,0	0/0:13,0:12:18.06:0,18,970	0/0:9,0:9:15.02:0,15,577	0/0:22,0:23:42.10:0,42,1831	0/0:6,0:6:9.02:0,9,377	1/1:8,0:8:10.73:93,11,0	1/1:6,0:8:6.02:167,6,0	./.
chr10	101466206	.	A	AG	1438.63	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=1.768;DP=265;FS=6.102;HRun=6;HaplotypeScore=44.7497;InbreedingCoeff=0.7719;MQ=63.41;MQ0=15;MQRankSum=-4.040;QD=14.53;ReadPosRankSum=-0.352;VQSLOD=2.3424;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,10:12:18.06:225,18,0	1/1:2,3:5:9.03:109,9,0	0/0:37,0:19:32.89:0,33,285	0/0:38,0:7:8.75:0,9,50	0/0:6,0:6:15.03:0,15,152	0/0:6,0:7:14.95:0,15,152	0/0:10,0:10:24.05:0,24,245	1/1:8,8:13:23.99:278,24,0	0/0:8,0:8:11.69:0,12,84	0/0:10,0:9:15:0,15,153	0/0:9,0:9:21.02:0,21,198	1/1:4,0:4:8.89:73,9,0	1/1:1,4:3:6.02:72,6,0	1/1:2,4:6:14.91:139,15,0	0/1:7,0:6:10.99:66,0,11	1/1:9,2:10:20.96:197,21,0	0/0:8,0:8:14.96:0,15,132	0/0:4,0:4:9.02:0,9,92	1/1:1,3:3:6.01:75,6,0	1/1:2,2:4:6.02:75,6,0	1/1:3,5:7:8.89:84,9,0	0/0:7,0:7:11.96:0,12,110	0/0:3,0:2:6.01:0,6,61	0/0:8,0:9:15.03:0,15,153	0/0:9,0:8:24.05:0,24,240	1/1:1,4:4:12.04:149,12,0	1/1:4,0:1:2.99:24,3,0	1/1:4,2:4:7.84:80,8,0
chr10	101466212	.	GAAAGAGAGAGAGA	G	973.49	PASS	AB=0.979;AC=14;AF=0.250;AN=56;BaseQRankSum=3.022;DP=275;FS=16.030;HRun=0;HaplotypeScore=84.0256;InbreedingCoeff=0.2020;MQ=61.22;MQ0=17;MQRankSum=-2.928;QD=10.70;ReadPosRankSum=2.311;VQSLOD=0.6031;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,1:12:18:264,18,0	1/1:5,0:5:8.89:79,9,0	0/0:32,0:16:32.84:0,33,399	0/0:38,0:7:7.92:0,8,68	0/0:6,0:6:15.05:0,15,616	0/0:6,0:6:14.72:0,15,742	0/0:8,0:8:24.08:0,24,889	0/1:16,0:14:20.82:21,0,383	0/0:9,0:9:18.03:0,18,562	0/0:11,0:9:24.01:0,24,668	0/0:10,0:10:27.09:0,27,781	0/1:4,0:5:23.54:24,0,95	0/0:8,0:6:15.05:0,15,452	0/1:5,0:5:6.64:7,0,314	0/0:8,0:6:7.59:0,8,300	1/1:3,8:10:20.51:633,21,0	0/0:7,0:7:15:0,15,331	0/0:5,0:5:15.05:0,15,324	0/1:6,0:4:4.97:5,0,64	0/1:5,0:5:13.13:13,0,83	0/1:8,0:7:31.29:31,0,93	0/0:8,0:8:18.06:0,18,577	0/0:4,0:3:6.02:0,6,111	0/0:9,0:9:18.06:0,18,842	0/0:11,0:10:30.10:0,30,1273	0/1:6,0:5:55.80:56,0,70	0/0:4,0:2:3.01:0,3,74	0/1:10,0:6:4.86:5,0,171
chr10	101466311	.	TG	T	3587.61	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=5.463;DP=493;FS=1.904;HRun=7;HaplotypeScore=74.3163;InbreedingCoeff=0.9497;MQ=78.99;MQ0=0;MQRankSum=-4.019;QD=23.92;ReadPosRankSum=0.452;VQSLOD=4.0529;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.18:0,90,1071	./.	0/0:29,0:26:65.97:0,66,765	0/0:46,0:36:35.86:0,36,596	0/0:11,0:11:27.09:0,27,339	0/0:7,0:7:21.07:0,21,264	0/0:16,0:16:48.14:0,48,588	1/1:5,28:33:81.16:820,81,0	0/0:16,0:16:42.12:0,42,515	0/0:14,0:14:30.08:0,30,363	0/0:16,0:16:42.12:0,42,514	0/0:12,0:12:27.09:0,27,339	0/0:11,0:11:33.10:0,33,403	0/0:13,0:13:36.10:0,36,440	1/1:2,11:13:33.07:333,33,0	0/0:23,0:23:54.17:0,54,679	0/0:19,0:19:54.17:0,54,668	0/0:14,0:15:39.07:0,39,460	1/1:5,19:23:54.12:551,54,0	1/1:2,13:15:36.06:361,36,0	1/1:2,21:23:51.11:520,51,0	0/0:11,0:11:30.10:0,30,377	0/0:15,0:15:39.12:0,39,486	0/0:28,0:28:78.23:0,78,957	0/0:8,0:8:4.76:0,5,176	1/1:4,13:17:4.35:360,4,0	1/1:0,18:18:48.11:490,48,0	1/1:1,6:7:15.03:153,15,0
chr10	101466661	.	TG	T	9588.05	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=10.754;DP=560;FS=10.037;HRun=2;HaplotypeScore=66.2217;InbreedingCoeff=0.9839;MQ=91.01;MQ0=0;MQRankSum=-9.189;QD=35.78;ReadPosRankSum=2.432;VQSLOD=5.0253;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,37:38:99:1286,99,0	1/1:0,3:3:9.03:117,9,0	0/0:39,0:39:99:0,108,1408	0/0:35,0:33:92.17:0,92,1218	0/0:21,0:21:63.20:0,63,917	0/0:19,0:19:57.19:0,57,843	0/0:16,0:16:48.16:0,48,720	1/1:1,21:22:60.19:777,60,0	0/0:22,0:22:63.21:0,63,944	0/0:15,0:15:45.15:0,45,670	0/0:12,0:12:36.12:0,36,535	1/1:0,8:8:24.08:310,24,0	1/1:0,26:26:75.24:973,75,0	1/1:0,15:15:42.14:545,42,0	1/1:0,19:19:57.19:739,57,0	1/1:0,23:23:57.19:740,57,0	0/0:24,0:24:72.24:0,72,1079	0/0:16,0:16:45.15:0,45,666	1/1:2,18:20:57.16:706,57,0	1/1:1,21:22:57.18:739,57,0	1/1:0,27:27:81.26:1052,81,0	0/0:19,0:19:57.19:0,57,854	0/0:15,0:15:42.13:0,42,604	0/0:25,0:25:75.25:0,75,1119	0/0:14,0:14:39.59:0,40,567	1/1:2,17:19:9.20:612,9,0	1/1:1,16:17:51.12:643,51,0	1/1:0,9:9:27.09:350,27,0
chr10	101470524	.	C	CAGAT	5490.58	PASS	AB=0.989;AC=28;AF=0.538;AN=52;BaseQRankSum=-5.249;DP=531;FS=10.951;HRun=0;HaplotypeScore=85.0724;InbreedingCoeff=0.6804;MQ=59.66;MQ0=1;MQRankSum=0.067;QD=17.32;ReadPosRankSum=-0.816;VQSLOD=3.5664;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,12:25:24.08:557,24,0	0/0:11,0:11:24.06:0,24,343	./.	./.	0/0:40,0:40:63.19:0,63,935	0/0:18,0:18:33.11:0,33,485	0/1:17,0:17:32.87:33,0,147	0/1:30,0:30:0:0,0,0	0/0:16,0:16:27.09:0,27,409	0/0:26,0:26:39.12:0,39,568	1/1:17,4:21:9.03:209,9,0	1/1:5,13:18:21.07:487,21,0	1/1:14,1:19:18.06:338,18,0	1/1:8,8:18:18.06:418,18,0	1/1:9,12:22:30.10:696,30,0	0/0:12,0:12:33.11:0,33,500	0/0:16,0:16:27.08:0,27,390	0/1:20,0:21:7.01:182,0,7	1/1:15,3:17:9.03:183,9,0	1/1:14,0:26:33.11:569,33,0	1/1:4,1:5:3.01:70,3,0	0/0:10,0:10:15.04:0,15,207	0/0:20,0:21:30.08:0,30,414	0/1:9,0:9:47.75:48,0,76	0/0:20,0:20:30.10:0,30,446	1/1:11,14:26:5.55:1004,6,0	1/1:13,11:25:21.07:487,21,0	1/1:11,3:16:9.03:209,9,0
chr10	101470605	.	C	CA	389.87	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.824;DP=485;FS=6.785;HRun=8;HaplotypeScore=52.3588;InbreedingCoeff=0.8146;MQ=77.12;MQ0=0;MQRankSum=-1.886;QD=27.85;ReadPosRankSum=0.311;VQSLOD=4.1070;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.02:0,60,549	0/0:13,0:13:33.01:0,33,302	0/0:14,0:14:9.51:0,10,249	0/0:10,0:10:17.99:0,18,158	0/0:29,0:29:77.71:0,78,713	0/0:22,0:21:63.03:0,63,577	0/0:11,0:11:30:0,30,270	0/0:32,0:33:86.06:0,86,771	0/0:10,0:11:26.02:0,26,220	0/0:24,0:24:66.01:0,66,597	0/0:16,0:16:42.02:0,42,384	0/0:16,0:16:42.02:0,42,384	0/0:13,0:13:33.02:0,33,302	0/0:23,0:24:59.05:0,59,523	0/0:18,0:18:42.02:0,42,384	0/0:14,0:14:36:0,36,326	0/0:12,0:12:30.01:0,30,275	1/1:0,14:14:42.12:485,42,0	0/0:14,0:14:39:0,39,351	0/0:35,0:35:90.04:0,90,824	0/0:8,0:7:24:0,24,216	0/0:13,1:14:4.40:0,4,295	0/0:19,0:19:48.02:0,48,439	0/0:5,0:5:15.01:0,15,137	0/0:9,0:9:21:0,21,192	0/0:16,0:16:45.02:0,45,412	0/0:31,0:31:66.01:0,66,598	0/0:16,0:16:39.02:0,39,357
chr10	101473313	.	A	AT	6914	PASS	AB=0.895;AC=31;AF=0.554;AN=56;BaseQRankSum=-11.354;DP=534;FS=1.155;HRun=10;HaplotypeScore=53.5766;InbreedingCoeff=0.8991;MQ=76.52;MQ0=0;MQRankSum=-0.620;QD=20.89;ReadPosRankSum=-0.547;VQSLOD=5.4638;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,16:22:51.43:527,51,0	1/1:1,11:13:29.91:302,30,0	0/0:8,0:9:14.97:0,15,123	0/0:11,0:12:14:0,14,104	0/0:17,0:17:44.92:0,45,366	0/0:17,0:17:41.95:0,42,345	0/0:22,0:23:64.94:0,65,520	1/1:6,28:35:81.02:837,81,0	0/0:13,0:13:35.96:0,36,296	0/0:19,0:19:53.92:0,54,443	0/0:19,0:19:38.93:0,39,320	1/1:5,17:22:26.49:487,26,0	1/1:4,21:25:63.15:665,63,0	1/1:2,14:16:33.08:352,33,0	1/1:3,23:26:54.14:576,54,0	1/1:2,11:13:8.44:295,8,0	0/0:17,1:19:14.99:0,15,319	1/1:3,8:11:18.05:192,18,0	1/1:3,8:12:26.88:258,27,0	1/1:3,19:22:50.97:494,51,0	1/1:4,19:24:8.02:477,8,0	0/1:15,2:17:22.05:22,0,251	0/0:14,0:14:35.95:0,36,296	0/0:17,1:18:18.94:0,19,362	0/0:23,0:23:56.86:0,57,462	1/1:8,26:33:53.56:775,54,0	1/1:7,16:24:41.94:430,42,0	1/1:8,7:15:21.05:224,21,0
chr10	101474835	.	AAC	A	509.68	PASS	AB=0.979;AC=12;AF=0.214;AN=56;BaseQRankSum=4.118;DP=647;FS=3.841;HRun=0;HaplotypeScore=119.3669;InbreedingCoeff=0.2212;MQ=53.25;MQ0=13;MQRankSum=-0.681;QD=3.05;ReadPosRankSum=-5.091;VQSLOD=-0.2273;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,1:22:23.26:185,23,0	0/1:9,0:9:14.96:54,0,15	0/0:50,0:17:27.42:0,27,415	0/0:50,0:24:40.06:0,40,386	0/1:21,2:23:12.33:12,0,753	0/0:21,0:21:47.19:0,47,715	0/0:16,2:18:5.61:0,6,525	0/1:35,0:35:10.43:10,0,309	0/0:26,1:27:35.84:0,36,1051	0/0:29,0:28:57.19:0,57,897	0/0:18,0:18:39.10:0,39,600	0/0:19,0:19:11.38:0,11,36	0/1:21,1:22:67.06:143,0,67	1/1:17,0:17:2.30:194,2,0	0/0:13,0:13:5.81:0,6,49	0/1:20,0:18:13.77:15,0,14	0/0:24,1:25:20.74:0,21,759	1/1:14,0:14:1.97:28,2,0	0/0:15,0:14:13.81:0,14,76	0/0:21,0:21:23.97:0,24,200	0/0:17,0:17:3:0,3,25	0/0:18,0:18:42.14:0,42,671	0/0:24,0:24:54.17:0,54,830	0/0:40,0:41:63.01:0,63,1431	0/0:25,0:25:63.19:0,63,929	0/0:26,0:26:43.07:0,43,276	0/0:22,0:21:11.95:0,12,94	0/1:4,0:4:12.28:18,0,12
chr10	101474837	.	C	CACACACAA	5380.20	PASS	AB=0.969;AC=20;AF=0.357;AN=56;BaseQRankSum=7.428;DP=645;FS=4.745;HRun=0;HaplotypeScore=163.6188;InbreedingCoeff=0.2463;MQ=53.23;MQ0=13;MQRankSum=-7.437;QD=19.01;ReadPosRankSum=1.215;VQSLOD=3.7865;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:22:88.65:182,0,89	0/1:9,0:9:24.17:24,0,45	0/0:51,0:17:29.23:0,29,472	0/0:49,0:23:29.84:0,30,419	0/0:23,0:23:33.04:0,33,1359	0/0:21,0:21:53.17:0,53,1179	0/0:17,0:17:48.12:0,48,979	0/1:38,0:38:9.28:9,0,270	0/0:27,0:27:81.23:0,81,1729	0/0:29,0:28:78.08:0,78,1610	0/0:18,0:18:48.04:0,48,1006	1/1:2,16:20:14.69:592,15,0	1/1:13,8:23:47.93:1572,48,0	0/1:17,0:17:37.03:197,0,37	1/1:13,0:13:6.91:187,7,0	0/1:11,0:18:39.81:429,0,40	0/0:25,0:25:60.15:0,60,1287	1/1:2,12:15:11.95:628,12,0	0/1:14,0:13:80.42:80,0,98	0/1:22,0:22:4.79:689,0,5	1/1:18,0:18:4.07:95,4,0	0/0:18,0:18:45.14:0,45,1113	0/0:21,0:21:60.15:0,60,1287	0/0:40,0:40:91.44:0,91,2214	0/0:23,0:23:63.19:0,63,1439	0/1:26,0:26:99:363,0,156	0/1:21,0:20:1.03:259,0,1	0/1:4,0:4:13.88:73,0,14
chr10	101474839	.	C	CACACACAA	6151.24	PASS	AB=0.832;AC=21;AF=0.375;AN=56;BaseQRankSum=3.371;DP=656;FS=1.324;HRun=0;HaplotypeScore=166.1228;InbreedingCoeff=0.7458;MQ=53.49;MQ0=14;MQRankSum=-7.050;QD=25.31;ReadPosRankSum=-1.266;VQSLOD=4.1425;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:18.88:0,19,186	0/0:9,0:9:14.88:0,15,116	0/0:52,0:17:32.75:0,33,482	0/0:48,0:23:36.81:0,37,436	0/0:22,0:22:64.40:0,64,1418	0/0:23,0:23:56.63:0,57,1216	0/0:17,0:17:48.12:0,48,1023	1/1:35,0:35:16.54:530,17,0	0/0:27,0:27:81.22:0,81,1775	0/0:31,0:30:69.08:0,69,1560	0/0:18,0:18:44.15:0,44,994	1/1:19,0:19:14.69:415,15,0	0/1:22,0:23:62.69:987,0,63	0/0:17,0:17:11.05:0,11,222	1/1:2,11:17:9.90:283,10,0	0/1:19,0:17:18.92:353,0,19	0/0:24,0:24:59.95:0,60,1318	1/1:14,0:14:14.07:441,14,0	1/1:4,10:18:40.51:530,41,0	1/1:3,17:23:35.97:1058,36,0	1/1:4,14:21:4.09:131,4,0	0/0:19,0:19:45.05:0,45,1130	0/0:21,0:21:57.16:0,57,1286	0/0:40,0:40:99:0,105,2335	0/0:21,0:21:63.19:0,63,1443	1/1:6,20:27:8.19:836,8,0	0/1:3,18:21:1.20:377,0,1	1/1:3,0:4:12.01:210,12,0
chr10	101475005	.	C	CT	3608.61	PASS	AB=0.676;AC=17;AF=0.304;AN=56;BaseQRankSum=5.850;DP=604;FS=6.753;HRun=9;HaplotypeScore=91.7517;InbreedingCoeff=0.8838;MQ=78.29;MQ0=0;MQRankSum=-7.462;QD=21.35;ReadPosRankSum=-3.480;VQSLOD=2.5046;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,107,916	0/0:5,0:5:12:0,12,104	0/0:24,0:22:18.82:0,19,266	0/0:22,0:21:33.31:0,33,266	0/0:27,1:29:46.83:0,47,624	0/0:32,0:32:77.96:0,78,673	0/0:16,0:16:41.96:0,42,360	1/1:9,20:28:66.12:702,66,0	0/0:24,1:25:32.80:0,33,514	0/0:15,0:16:43.93:0,44,361	0/0:15,0:15:41.99:0,42,365	0/0:3,0:21:30.55:0,31,90	0/0:0,0:29:57.04:0,57,168	0/0:26,0:26:59.96:0,60,517	1/1:5,16:22:27.87:497,28,0	0/0:24,1:25:48.78:0,49,480	0/0:28,0:28:71.97:0,72,625	1/1:1,15:16:13.08:372,13,0	0/1:13,11:25:18.23:453,0,18	1/1:10,10:20:10.05:332,10,0	1/1:5,5:10:8.08:127,8,0	0/0:20,0:20:50.97:0,51,443	0/0:10,0:10:26.97:0,27,230	0/0:32,0:32:86.89:0,87,738	0/0:18,0:18:38.98:0,39,339	1/1:5,13:18:17.87:410,18,0	1/1:6,15:20:50.99:524,51,0	1/1:4,4:8:18.04:191,18,0
chr10	101475021	.	T	TA	4213.30	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=3.789;DP=573;FS=7.562;HRun=4;HaplotypeScore=82.7719;InbreedingCoeff=0.9834;MQ=78.27;MQ0=1;MQRankSum=-6.169;QD=30.75;ReadPosRankSum=-5.318;VQSLOD=2.3340;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,1242	0/0:4,0:4:12.03:0,12,136	0/0:26,0:24:24.09:0,24,471	0/0:22,0:20:12.22:0,12,253	0/0:33,0:33:96.23:0,96,1056	0/0:27,0:26:78.19:0,78,864	0/0:19,0:19:57.12:0,57,619	1/1:3,24:26:69.18:877,69,0	0/0:23,0:23:60.16:0,60,671	0/0:21,0:21:57.13:0,57,628	0/0:14,0:14:42.07:0,42,461	0/0:19,0:19:51.14:0,51,570	0/0:30,0:30:87.17:0,87,941	0/0:25,0:25:69.12:0,69,747	1/1:2,19:21:54.14:701,54,0	0/0:23,0:23:50.05:0,50,605	0/0:28,0:28:77.65:0,78,824	0/0:16,0:16:39.07:0,39,419	1/1:5,17:22:40.08:644,40,0	1/1:1,15:16:42.04:526,42,0	1/1:4,7:11:21.07:281,21,0	0/0:16,0:16:41.89:0,42,439	0/0:12,0:12:36.09:0,36,397	0/0:25,0:24:69.18:0,69,772	0/0:12,0:12:36.10:0,36,408	1/1:4,17:21:26.65:591,27,0	1/1:2,13:14:33.11:449,33,0	1/1:0,4:4:12.03:144,12,0
chr10	101475437	.	GT	G	376.67	PASS	AB=0.687;AC=5;AF=0.089;AN=56;BaseQRankSum=-0.930;DP=437;FS=1.515;HRun=14;HaplotypeScore=69.1272;InbreedingCoeff=0.2532;MQ=81.74;MQ0=1;MQRankSum=0.616;QD=6.38;ReadPosRankSum=2.441;VQSLOD=2.7363;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:24:18.79:266,19,0	0/1:4,3:7:28.78:47,0,29	0/0:33,0:19:6.11:0,6,63	0/0:39,0:26:17.16:0,17,112	0/0:16,2:19:0.72:0,1,280	0/0:8,0:10:11.95:0,12,172	0/0:13,0:13:20.99:0,21,182	0/0:11,0:22:40.53:0,41,239	0/0:14,0:14:27.02:0,27,247	0/0:17,1:18:3.89:0,4,165	0/0:16,2:18:3.80:0,4,307	0/0:7,0:13:28.92:0,29,167	0/0:2,0:9:8.52:0,9,43	0/1:9,6:16:5.11:106,0,5	0/0:3,0:8:19.89:0,20,100	0/1:6,6:12:59.96:79,0,60	0/0:14,1:16:24.21:0,24,327	0/0:14,0:14:35.57:0,36,290	0/0:8,0:17:48.95:0,49,283	0/0:2,0:16:44.31:0,44,240	0/0:2,0:4:8.66:0,9,50	0/0:11,0:12:23.86:0,24,209	0/0:15,2:18:24.59:0,25,314	0/0:8,0:9:20.86:0,21,182	0/0:13,0:13:24.02:0,24,219	0/0:5,0:16:37.45:0,37,209	0/0:3,0:16:20.04:0,20,110	0/0:4,0:9:5.68:0,6,29
chr10	101476706	.	TACATATACAC	T	751.44	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=5.878;DP=616;FS=2.641;HRun=0;HaplotypeScore=182.8187;InbreedingCoeff=0.8184;MQ=63.53;MQ0=2;MQRankSum=-5.112;QD=13.18;ReadPosRankSum=-2.431;VQSLOD=2.4514;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:55.58:0,56,2370	0/0:6,0:6:18.06:0,18,834	0/0:24,0:13:27.95:0,28,896	0/1:19,0:12:3.37:3,0,383	0/0:29,0:29:84.23:0,84,3613	0/0:20,0:20:60.21:0,60,2882	0/0:16,0:16:48.14:0,48,1832	0/0:46,0:45:99:0,108,4500	0/0:19,0:19:54.19:0,54,2765	0/0:23,0:23:57.19:0,57,2554	0/0:22,0:22:66.23:0,66,3083	1/1:1,17:18:14.28:407,14,0	1/1:0,20:20:15.05:458,15,0	0/0:20,0:20:57.18:0,57,2582	0/0:29,0:29:75.26:0,75,3605	0/0:23,0:23:66.23:0,66,3034	0/0:24,0:24:60.64:0,61,2473	0/0:9,0:9:24.04:0,24,878	0/0:21,0:21:54.14:0,54,2079	0/0:35,0:35:99:0,99,4363	0/0:13,0:13:36.12:0,36,1703	0/0:19,0:19:54.14:0,54,2142	0/0:21,0:21:60.21:0,60,2493	0/0:13,0:13:33.11:0,33,1461	0/0:18,0:18:48.16:0,48,2336	0/0:30,0:30:84.27:0,84,3870	0/0:30,0:30:75.22:0,75,3334	0/0:23,0:23:63.22:0,63,3078
chr10	101478607	.	A	AT	3095.70	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-10.401;DP=543;FS=0.401;HRun=9;HaplotypeScore=61.3246;InbreedingCoeff=0.7420;MQ=75.51;MQ0=5;MQRankSum=1.566;QD=14.88;ReadPosRankSum=-2.691;VQSLOD=3.1425;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:39.45:98,0,39	0/1:7,0:7:2.71:18,0,3	0/0:24,0:11:5.12:0,5,63	0/0:27,0:16:6.49:0,6,93	0/0:21,0:21:59.95:0,60,513	0/0:23,0:23:62.95:0,63,538	0/0:17,0:17:41.94:0,42,351	1/1:9,24:34:62.84:589,63,0	0/0:20,0:20:50.93:0,51,429	0/0:27,0:27:59.96:0,60,514	0/0:14,0:14:41.93:0,42,348	0/0:14,0:14:32.97:0,33,283	0/0:15,0:15:41.88:0,42,348	0/1:15,0:15:8.85:20,0,9	1/1:3,13:16:24.06:264,24,0	0/0:17,0:17:6.26:0,6,20	0/0:27,0:27:65.90:0,66,556	0/0:21,0:21:53.90:0,54,453	1/1:2,14:16:42.06:438,42,0	1/1:1,11:12:32.89:317,33,0	1/1:0,10:11:27.03:284,27,0	0/0:9,0:9:23.99:0,24,206	0/0:13,0:13:32.94:0,33,275	0/0:19,0:19:53.90:0,54,449	0/0:27,0:27:74.95:0,75,642	1/1:3,17:20:40.59:537,41,0	1/1:7,20:28:23.57:430,24,0	1/1:2,12:14:7.10:304,7,0
chr10	101478631	.	T	TA	1520.13	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.502;DP=564;FS=6.344;HRun=1;HaplotypeScore=66.6080;InbreedingCoeff=0.9944;MQ=84.56;MQ0=4;MQRankSum=-2.884;QD=36.19;ReadPosRankSum=0.711;VQSLOD=3.6878;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.29:0,96,1211	0/0:6,0:6:18.05:0,18,219	0/0:26,0:21:29.37:0,29,562	0/0:29,0:21:47.33:0,47,455	0/0:23,0:23:66.17:0,66,812	0/0:24,0:24:63.20:0,63,816	0/0:18,0:18:51.14:0,51,632	0/0:26,0:26:66.17:0,66,806	0/0:18,0:18:54.15:0,54,671	0/0:27,0:27:78.17:0,78,936	0/0:17,0:17:51.16:0,51,650	1/1:0,17:17:48.16:710,48,0	1/1:1,24:25:63.21:932,63,0	0/0:14,0:14:42.12:0,42,517	0/0:13,0:13:30.08:0,30,373	0/0:18,0:18:54.16:0,54,677	0/0:22,0:22:63.14:0,63,757	0/0:24,0:24:65.80:0,66,825	0/0:14,0:14:42.10:0,42,496	0/0:17,0:17:51.13:0,51,618	0/0:13,0:13:30.09:0,30,377	0/0:15,0:15:45.12:0,45,557	0/0:14,0:14:39.13:0,39,505	0/0:17,0:17:48.16:0,48,622	0/0:29,0:29:84.25:0,84,1052	0/0:25,0:25:72.22:0,72,911	0/0:26,0:26:60.20:0,60,778	0/0:11,0:11:27.06:0,27,322
chr10	101479800	.	GT	G	3893.62	PASS	AB=0.990;AC=12;AF=0.214;AN=56;BaseQRankSum=-1.311;DP=710;FS=5.160;HRun=1;HaplotypeScore=92.9712;InbreedingCoeff=0.6042;MQ=89.55;MQ0=0;MQRankSum=-3.277;QD=19.76;ReadPosRankSum=0.721;VQSLOD=3.7954;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,47:46:99:1635,117,0	1/1:0,15:15:38.94:545,39,0	0/0:36,0:35:99:0,105,1573	0/0:29,0:29:81.48:0,81,1235	0/0:24,0:24:69.23:0,69,1041	0/0:22,0:22:60.18:0,60,888	0/0:37,0:37:99:0,111,1571	0/0:20,0:20:18.87:0,19,137	0/0:31,0:31:87.27:0,87,1306	0/0:27,0:27:78.26:0,78,1173	0/0:16,0:16:48.13:0,48,676	0/0:27,0:27:44.31:0,44,288	0/1:22,0:22:12.52:13,0,142	1/1:0,24:24:60.20:838,60,0	0/0:25,0:25:40.61:0,41,235	1/1:0,21:21:57.19:797,57,0	0/0:35,0:35:99:0,105,1557	0/0:15,0:15:15.58:0,16,127	0/1:22,1:23:57.21:57,0,155	0/0:28,0:28:25.83:0,26,241	0/0:51,0:51:39.83:0,40,446	0/0:17,0:17:51.16:0,51,749	0/0:17,0:17:51.09:0,51,706	0/0:36,0:36:99:0,108,1536	0/0:18,0:18:54.15:0,54,781	0/1:21,0:21:1.32:1,0,158	0/1:24,0:24:8.40:8,0,192	0/0:2,0:2:5.62:0,6,27
chr10	101480013	.	C	CCT	8750.48	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=0.639;DP=621;FS=0.755;HRun=0;HaplotypeScore=111.8572;InbreedingCoeff=0.9761;MQ=74.79;MQ0=14;MQRankSum=-3.087;QD=26.12;ReadPosRankSum=-0.174;VQSLOD=5.8134;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,23:27:41.90:649,42,0	1/1:5,8:13:15.05:237,15,0	0/0:29,0:23:38.70:0,39,441	0/0:32,0:25:30.52:0,31,404	0/0:12,0:12:33.04:0,33,371	0/0:23,0:23:54.08:0,54,652	0/0:18,0:18:45.11:0,45,550	1/1:13,28:42:49.35:1204,49,0	0/0:23,0:23:57.18:0,57,718	0/0:29,0:29:72.22:0,72,885	0/0:16,0:16:33.10:0,33,416	1/1:15,12:22:45.15:718,45,0	1/1:16,6:21:36.92:524,37,0	1/1:10,8:16:33.11:538,33,0	1/1:19,14:33:60.20:944,60,0	1/1:2,11:13:9.02:128,9,0	0/0:22,1:22:7.43:0,7,614	1/1:5,12:17:24.08:399,24,0	1/1:21,4:24:53.90:724,54,0	1/1:15,10:24:39.04:604,39,0	1/1:4,18:22:39.60:587,40,0	0/0:18,0:18:42.12:0,42,512	0/0:14,0:14:36.11:0,36,442	0/0:29,0:28:57.18:0,57,717	0/0:20,0:20:45.14:0,45,556	1/1:17,4:21:57.93:786,58,0	1/1:5,10:14:29.89:461,30,0	1/1:4,5:9:15.05:249,15,0
chr10	101480043	.	A	ATGTG	3533.90	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=5.355;DP=666;FS=7.316;HRun=0;HaplotypeScore=165.3404;InbreedingCoeff=0.8718;MQ=48.72;MQ0=34;MQRankSum=-2.135;QD=14.02;ReadPosRankSum=1.332;VQSLOD=2.8845;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,3:24:35.03:440,35,0	1/1:5,1:7:14.26:219,14,0	0/0:49,0:9:14.41:0,14,182	0/0:48,0:11:12.44:0,12,131	0/0:21,0:21:42.61:0,43,655	0/0:23,0:23:17.87:0,18,711	0/0:31,0:32:72.18:0,72,1000	1/1:30,0:30:43.84:503,44,0	0/0:25,0:25:39.12:0,39,602	0/0:27,0:27:54.17:0,54,819	0/0:16,0:16:32.31:0,32,449	0/0:28,0:22:38.50:0,38,555	0/0:21,0:20:45.04:0,45,600	1/1:10,11:21:23.81:383,24,0	1/1:34,0:33:28.39:434,28,0	1/1:10,2:12:11.35:199,11,0	0/0:22,0:22:47.78:0,48,714	0/0:18,0:16:39.11:0,39,563	0/1:29,0:27:34.45:304,0,34	1/1:23,0:22:5.55:197,6,0	1/1:22,0:22:11.73:157,12,0	0/0:17,0:17:30.10:0,30,469	0/0:14,0:14:23.66:0,24,304	0/0:30,0:27:51.64:0,52,800	0/0:23,0:22:50.42:0,50,725	1/1:24,0:24:16.99:368,17,0	1/1:14,0:13:9.92:208,10,0	1/1:7,0:7:9.03:123,9,0
chr10	101480053	.	GTGTGTGTGTA	G	2212.18	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=9.120;DP=648;FS=18.563;HRun=0;HaplotypeScore=213.1525;InbreedingCoeff=0.5934;MQ=48.00;MQ0=26;MQRankSum=-3.964;QD=9.22;ReadPosRankSum=-1.402;VQSLOD=1.2786;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:99:118,0,755	0/1:9,0:9:47.83:48,0,313	0/0:42,0:6:14.69:0,15,100	0/0:47,0:10:12.73:0,13,178	0/0:23,0:23:47.72:0,48,1594	0/0:22,0:22:54.61:0,55,1820	0/0:36,0:36:86.99:0,87,2559	0/1:24,0:24:6.59:228,0,7	0/0:24,0:24:51.11:0,51,2058	0/0:24,0:24:57.05:0,57,1514	0/0:19,0:19:43.91:0,44,1510	0/0:27,0:23:39.50:0,39,530	0/0:19,0:19:43.66:0,44,609	0/1:24,0:23:67.90:68,0,492	1/1:33,2:34:41.21:438,41,0	0/1:9,0:9:8.68:9,0,302	0/0:21,0:20:54.97:0,55,1863	0/0:19,0:17:26.79:0,27,598	1/1:27,1:27:29.26:568,29,0	1/1:23,1:24:29.34:354,29,0	1/1:22,0:22:11.60:99,12,0	0/0:15,0:15:36.59:0,37,1541	0/0:15,0:15:23.65:0,24,1079	0/0:30,0:27:52.63:0,53,2032	0/0:24,0:23:40.94:0,41,2062	1/1:25,0:25:10.07:301,10,0	1/1:8,0:8:16.34:119,16,0	1/1:6,0:6:8.90:61,9,0
chr10	101480055	.	GTGTGTGTA	G	3446.86	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=9.994;DP=645;FS=6.362;HRun=0;HaplotypeScore=190.9071;InbreedingCoeff=0.6225;MQ=48.10;MQ0=24;MQRankSum=-1.869;QD=13.21;ReadPosRankSum=-2.130;VQSLOD=2.0006;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:26:99:160,0,539	0/1:10,0:10:47.85:48,0,227	0/0:41,0:6:14.69:0,15,100	0/0:45,0:9:12.46:0,12,125	0/0:23,0:23:50.88:0,51,1312	0/0:21,0:22:54.31:0,54,1450	0/0:36,0:36:86.89:0,87,2039	1/1:26,0:26:38.77:351,39,0	0/0:24,0:24:56.88:0,57,1746	0/0:23,0:23:57.05:0,57,1238	0/0:19,0:19:44.14:0,44,1175	0/0:27,0:23:39.06:0,39,345	0/1:19,0:19:7.18:7,0,314	0/1:24,0:23:82.12:82,0,321	1/1:15,19:34:44.60:637,45,0	0/1:10,0:10:5.80:6,0,248	0/0:22,0:21:57.96:0,58,1565	0/0:19,0:17:17.44:0,17,445	1/1:14,13:26:34.94:844,35,0	1/1:10,14:24:29.50:399,29,0	1/1:19,3:22:14.59:123,15,0	0/0:15,0:15:36.18:0,36,1233	0/0:15,0:15:23.64:0,24,850	0/0:29,0:26:52.61:0,53,1630	0/0:24,0:23:40.50:0,41,1621	1/1:8,16:24:45.19:610,45,0	1/1:8,0:8:16.34:119,16,0	1/1:5,0:6:8.90:61,9,0
chr10	101480059	.	GTGTA	G	2815.09	PASS	AB=0.947;AC=24;AF=0.429;AN=56;BaseQRankSum=11.369;DP=638;FS=3.281;HRun=0;HaplotypeScore=154.8999;InbreedingCoeff=0.4302;MQ=48.43;MQ0=23;MQRankSum=-4.504;QD=8.45;ReadPosRankSum=-2.119;VQSLOD=2.9031;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,2:28:99:174,0,300	0/1:7,2:9:68.83:69,0,103	0/0:39,0:5:14.69:0,15,100	0/0:45,0:9:11.99:0,12,102	0/0:25,0:25:56.58:0,57,848	0/0:21,0:21:9.07:0,9,762	0/0:33,1:34:23.91:0,24,1005	1/1:24,0:24:40.08:374,40,0	0/0:22,0:22:56.88:0,57,1104	0/0:20,0:20:56.93:0,57,758	0/0:19,0:19:43.72:0,44,611	0/1:29,0:26:99:118,0,123	0/1:19,1:20:59.19:275,0,59	0/1:23,1:24:98.49:98,0,191	1/1:29,4:33:44.70:405,45,0	0/1:9,1:10:5.49:5,0,115	0/0:23,0:22:57.46:0,57,930	0/1:19,0:17:6.93:7,0,230	1/1:23,0:22:32.96:495,33,0	1/1:24,0:24:29.81:278,30,0	1/1:19,2:20:14.89:123,15,0	0/0:17,0:17:39.09:0,39,726	0/0:16,0:16:23.99:0,24,425	0/1:31,0:28:5.27:5,0,938	0/0:23,1:23:27.70:0,28,876	1/1:21,3:24:44.12:409,44,0	1/1:4,4:8:16.34:119,16,0	1/1:4,1:5:8.90:61,9,0
chr10	101480063	.	ATGTG	A	1143.37	PASS	AB=0.920;AC=15;AF=0.288;AN=52;BaseQRankSum=6.461;DP=638;FS=1.305;HRun=0;HaplotypeScore=163.8273;InbreedingCoeff=0.5152;MQ=48.36;MQ0=18;MQRankSum=-3.533;QD=4.59;ReadPosRankSum=1.708;VQSLOD=2.8567;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:31.63:0,32,575	0/0:10,0:10:13.07:0,13,183	./.	0/0:45,0:7:5.99:0,6,61	0/0:20,0:25:41.54:0,42,743	0/1:18,1:20:55:55,0,594	0/1:33,0:36:23.38:23,0,853	0/1:25,0:25:0.14:0,0,1	0/0:22,0:22:51.16:0,51,1065	0/0:19,0:20:25.91:0,26,447	0/0:19,0:20:29.73:0,30,598	1/1:12,14:26:17.19:255,17,0	1/1:8,10:19:30.09:427,30,0	0/0:23,0:23:20.39:0,20,356	1/1:32,0:32:14.75:122,15,0	0/0:10,0:10:15.05:0,15,259	0/0:25,0:26:53.42:0,53,873	0/1:14,1:18:31.01:42,0,31	1/1:22,0:21:26.94:221,27,0	0/1:25,0:25:12.12:65,0,12	0/0:21,0:20:0:0,0,0	0/0:17,0:17:30.55:0,31,617	0/0:14,0:14:26.96:0,27,448	0/0:28,1:26:4.40:0,4,845	0/0:23,0:23:44.30:0,44,883	1/1:24,0:24:13.11:104,13,0	0/0:10,0:10:5.99:0,6,48	./.
chr10	101481228	.	AAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	A	2100.34	PASS	AB=0.908;AC=8;AF=0.143;AN=56;BaseQRankSum=2.619;DP=543;FS=1.181;HRun=0;HaplotypeScore=418.5486;InbreedingCoeff=0.2517;MQ=72.26;MQ0=15;MQRankSum=-4.526;QD=14.69;ReadPosRankSum=-1.682;VQSLOD=0.7321;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:36.74:0,37,2233	0/0:5,0:5:6.01:0,6,336	0/0:35,0:18:5.12:0,5,20	0/1:48,0:27:1.74:2,0,263	0/0:10,0:10:3.01:0,3,179	0/0:21,0:20:18.97:0,19,1599	0/0:15,0:14:13.86:0,14,892	0/0:25,0:25:21.04:0,21,349	0/0:22,0:22:32.12:0,32,3105	0/0:22,0:21:33.11:0,33,3215	0/0:16,0:16:23.07:0,23,1195	1/1:11,5:16:3.48:288,3,0	1/1:11,6:17:6.02:573,6,0	0/0:20,0:20:35.13:0,35,3115	0/1:19,0:25:99:761,0,134	0/0:14,0:14:15.94:0,16,1681	0/0:16,0:16:26.12:0,26,2308	0/0:9,0:9:21.07:0,21,1399	0/0:13,0:13:24.04:0,24,310	0/1:18,0:17:43.40:43,0,103	0/0:29,0:27:9.01:0,9,120	0/0:17,0:16:27.09:0,27,2955	0/0:16,0:16:9.02:0,9,259	0/0:23,0:23:45.15:0,45,4527	0/0:22,0:22:30.10:0,30,3474	0/0:15,0:15:21.06:0,21,293	0/1:15,0:18:99:558,0,270	0/0:5,0:4:12.04:0,12,173
chr10	101481873	.	G	GA	355.34	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.058;DP=612;FS=2.734;HRun=0;HaplotypeScore=59.4711;InbreedingCoeff=0.9905;MQ=91.34;MQ0=0;MQRankSum=-1.749;QD=27.33;ReadPosRankSum=1.408;VQSLOD=4.2101;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,111,1483	0/0:9,0:9:27.09:0,27,377	0/0:25,0:25:68.78:0,69,821	0/0:23,0:23:62.43:0,62,764	0/0:20,0:20:60.20:0,60,838	0/0:25,0:25:75.24:0,75,1025	0/0:26,0:26:75.22:0,75,1012	0/0:28,0:28:84.19:0,84,1076	0/0:21,0:21:63.20:0,63,863	0/0:23,0:23:69.23:0,69,960	0/0:22,0:22:66.21:0,66,900	0/0:25,0:25:75.24:0,75,1032	0/0:23,0:23:69.23:0,69,963	0/0:19,0:19:57.15:0,57,761	0/0:31,0:31:93.29:0,93,1269	0/0:20,0:20:60.20:0,60,838	0/0:27,0:27:81.23:0,81,1079	1/1:1,12:13:30.10:450,30,0	0/0:25,0:25:75.11:0,75,987	0/0:25,0:25:72.24:0,72,999	0/0:13,0:13:39.10:0,39,496	0/0:17,0:17:51.17:0,51,713	0/0:19,0:19:54.16:0,54,718	0/0:19,0:19:57.19:0,57,797	0/0:24,0:24:72.21:0,72,967	0/0:15,0:15:45.15:0,45,629	0/0:26,0:26:78.26:0,78,1089	0/0:7,0:7:18.06:0,18,252
chr10	101484605	.	TAG	T	1966.29	PASS	AB=0.529;AC=7;AF=0.125;AN=56;BaseQRankSum=8.481;DP=531;FS=0.000;HRun=0;HaplotypeScore=66.5058;InbreedingCoeff=0.8398;MQ=90.01;MQ0=0;MQRankSum=-5.158;QD=27.31;ReadPosRankSum=2.535;VQSLOD=4.7352;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:33.11:439,33,0	1/1:1,14:15:39.13:519,39,0	0/0:24,1:24:9.77:0,10,638	0/0:29,0:28:59.94:0,60,929	0/0:25,0:25:63.20:0,63,1063	0/0:15,0:15:39.13:0,39,664	0/0:16,0:16:48.16:0,48,831	0/0:25,0:25:63.22:0,63,1092	0/0:21,0:21:57.20:0,57,979	0/0:20,0:20:57.20:0,57,987	0/0:14,0:14:42.14:0,42,721	0/0:26,0:26:75.23:0,75,1241	0/0:13,0:13:39.13:0,39,676	1/1:2,17:19:51.17:679,51,0	0/0:15,0:15:39.13:0,39,676	0/1:2,16:18:9.83:477,0,10	0/0:17,0:17:51.13:0,51,825	0/0:19,0:19:54.18:0,54,923	0/0:13,0:13:36.12:0,36,624	0/0:15,0:15:42.14:0,42,727	0/0:15,0:15:39.13:0,39,648	0/0:15,0:15:42.14:0,42,727	0/0:14,0:14:42.13:0,42,690	0/0:11,0:11:30.10:0,30,510	0/0:25,0:25:75.26:0,75,1299	0/0:28,0:28:72.24:0,72,1223	0/0:28,0:28:78.24:0,78,1288	0/0:15,0:15:45.15:0,45,720
chr10	101485186	.	TA	T	1718.06	PASS	AB=0.548;AC=7;AF=0.125;AN=56;BaseQRankSum=7.934;DP=531;FS=6.263;HRun=6;HaplotypeScore=52.7180;InbreedingCoeff=0.8892;MQ=79.31;MQ0=0;MQRankSum=-3.345;QD=23.22;ReadPosRankSum=0.768;VQSLOD=2.8092;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:75.19:806,75,0	1/1:1,7:8:21.05:226,21,0	0/0:14,0:14:39.12:0,39,498	0/0:13,0:13:23.31:0,23,232	0/0:27,0:27:72.23:0,72,934	0/0:19,0:19:54.17:0,54,696	0/0:24,0:24:69.22:0,69,894	0/0:22,0:22:51.16:0,51,654	0/0:21,0:21:60.18:0,60,775	0/0:20,0:20:57.18:0,57,736	0/0:17,0:17:51.17:0,51,671	0/0:18,0:18:48.16:0,48,626	0/0:11,0:11:27.09:0,27,355	0/1:3,14:17:3.39:319,0,3	0/0:22,0:22:54.18:0,54,710	1/1:3,19:22:48.12:516,48,0	0/0:21,0:22:66.08:0,66,843	0/0:15,0:15:36.12:0,36,470	0/0:16,0:16:45.15:0,45,592	0/0:27,0:27:78.25:0,78,1024	0/0:21,0:21:57.19:0,57,750	0/0:15,0:15:42.14:0,42,552	0/0:15,0:15:45.13:0,45,571	0/0:16,0:16:48.16:0,48,632	0/0:15,0:15:42.14:0,42,552	0/0:32,0:32:90.28:0,90,1162	0/0:27,0:27:69.22:0,69,905	0/0:8,0:8:24.08:0,24,316
chr10	101485697	.	TAC	T	8600.30	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.713;DP=1209;FS=34.200;HRun=0;HaplotypeScore=252.1203;InbreedingCoeff=0.9928;MQ=54.74;MQ0=22;MQRankSum=-0.050;QD=23.50;ReadPosRankSum=0.502;VQSLOD=3.7623;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:67,0:67:96.26:0,96,1587	0/0:17,0:16:36.12:0,36,599	0/0:41,0:10:16.37:0,16,265	0/0:45,0:19:37.57:0,38,500	0/0:34,1:35:58.15:0,58,1433	0/0:36,0:36:92.99:0,93,1494	0/0:37,0:37:84.55:0,85,1365	1/1:21,37:50:99:1267,105,0	0/0:46,0:45:99:0,117,1903	0/0:56,0:55:99:0,124,2149	0/0:23,0:23:48.15:0,48,773	0/0:64,0:63:84.57:0,85,1446	0/0:50,0:50:95.94:0,96,1500	0/0:34,1:33:63.11:0,63,1040	1/1:7,56:63:99:1578,126,0	0/0:55,1:56:99:0,102,1664	0/0:40,1:41:67.64:0,68,1626	0/0:53,0:52:75.04:0,75,1325	1/1:15,20:32:36.84:555,37,0	1/1:6,38:42:69.03:858,69,0	1/1:32,39:69:99:1879,150,0	0/0:24,0:24:63.20:0,63,1006	0/0:39,0:39:87.27:0,87,1444	0/0:56,1:56:99:0,102,1723	0/0:21,0:21:48.27:0,48,929	1/1:7,47:53:82.24:1548,82,0	1/1:4,27:31:60.19:763,60,0	1/1:2,8:10:12.04:153,12,0
chr10	101485779	.	TAC	T	1366.66	PASS	AB=0.794;AC=7;AF=0.125;AN=56;BaseQRankSum=8.866;DP=1266;FS=18.168;HRun=0;HaplotypeScore=245.9020;InbreedingCoeff=-0.0302;MQ=50.07;MQ0=36;MQRankSum=-0.642;QD=3.59;ReadPosRankSum=-4.042;VQSLOD=0.9651;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:43,7:50:8.73:9,0,278	0/1:10,8:18:54.90:55,0,121	0/0:66,0:15:39.56:0,40,673	0/0:49,0:15:36.09:0,36,676	0/0:35,0:35:96.22:0,96,1726	0/0:29,0:29:77.96:0,78,1320	0/0:35,0:34:93.08:0,93,1710	0/0:70,0:63:99:0,183,3256	0/0:46,0:46:99:0,117,2179	0/0:61,0:59:99:0,171,3074	0/0:27,0:27:72.23:0,72,1325	0/1:60,15:73:3.88:282,0,4	0/1:49,20:68:10.35:506,0,10	0/1:35,14:48:77.68:78,0,428	0/0:50,0:50:99:0,120,2123	0/1:54,32:83:99:405,0,514	0/0:35,0:35:88.78:0,89,1692	0/1:29,5:33:99:161,0,779	0/0:27,0:24:72.21:0,72,1269	0/0:43,0:43:75.26:0,75,1429	0/0:78,0:75:99:0,201,3526	0/0:29,0:29:84.27:0,84,1581	0/0:35,0:34:90.30:0,90,1676	0/0:47,0:46:99:0,105,1979	0/0:31,0:31:90.28:0,90,1642	0/0:46,0:43:99:0,126,2265	0/0:27,0:27:69.23:0,69,1306	0/0:13,0:13:30.10:0,30,553
chr10	101485991	.	G	GAC	2581.61	PASS	AB=0.645;AC=4;AF=0.071;AN=56;BaseQRankSum=3.804;DP=1042;FS=2.246;HRun=0;HaplotypeScore=149.3872;InbreedingCoeff=0.4811;MQ=58.90;MQ0=15;MQRankSum=0.467;QD=24.82;ReadPosRankSum=1.315;VQSLOD=4.1427;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:46:99:0,114,1335	0/0:11,0:11:30.07:0,30,344	0/0:38,0:13:14.33:0,14,152	0/0:46,0:20:29.58:0,30,305	0/0:28,0:28:52.01:0,52,755	0/0:34,0:35:89.78:0,90,1054	0/0:41,0:41:99:0,99,1166	0/0:43,0:43:87.09:0,87,1035	0/0:39,0:39:90.10:0,90,1071	0/0:45,0:46:99:0,120,1391	0/0:31,0:31:75.13:0,75,900	0/1:12,20:32:11.58:619,0,12	1/1:10,35:44:47.48:1283,47,0	0/0:44,0:44:99:0,102,1207	0/0:50,0:50:99:0,132,1610	0/0:46,0:46:99:0,117,1404	0/0:34,0:34:81.22:0,81,969	0/1:14,13:27:99:795,0,101	0/0:30,0:23:39.11:0,39,469	0/0:38,0:37:83.72:0,84,981	0/0:64,0:63:99:0,141,1854	0/0:37,0:37:84:0,84,1008	0/0:37,0:38:78.20:0,78,929	0/0:47,0:48:99:0,111,1338	0/0:21,0:22:52.55:0,53,608	0/0:34,0:34:78.21:0,78,931	0/0:25,0:25:54.11:0,54,645	0/0:17,0:18:53.99:0,54,630
chr10	101486089	.	G	GAC	2698.85	PASS	AB=0.626;AC=4;AF=0.071;AN=56;BaseQRankSum=-10.633;DP=970;FS=1.615;HRun=0;HaplotypeScore=131.0905;InbreedingCoeff=-0.0789;MQ=58.26;MQ0=10;MQRankSum=-0.177;QD=21.08;ReadPosRankSum=-0.488;VQSLOD=3.7192;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,27:46:52.86:1093,0,53	0/1:2,5:8:30.95:171,0,31	0/0:38,0:16:17.87:0,18,185	0/0:48,0:17:11.49:0,11,111	0/0:28,0:31:56.41:0,56,718	0/0:20,0:20:36.07:0,36,399	0/0:28,0:30:50.97:0,51,566	0/0:40,0:40:47.54:0,48,501	0/0:26,0:27:59.65:0,60,627	0/0:50,0:52:99:0,111,1209	0/0:15,0:15:30.09:0,30,349	0/0:31,0:33:21.39:0,21,650	0/0:30,0:33:80.74:0,81,885	0/1:10,21:31:80.45:694,0,80	0/0:34,0:39:95.60:0,96,1027	0/1:21,22:43:99:851,0,122	0/0:37,0:39:80.71:0,81,871	0/0:7,0:24:23.38:0,23,172	0/0:25,0:24:38.94:0,39,434	0/0:33,0:34:84.08:0,84,963	0/0:75,0:78:99:0,123,1502	0/0:21,0:24:50.63:0,51,523	0/0:26,0:29:16.64:0,17,561	0/0:36,0:39:83.69:0,84,895	0/0:48,0:51:99:0,117,1289	0/0:41,0:45:99:0,103,1200	0/0:17,0:21:44.63:0,45,464	0/0:19,0:19:44.96:0,45,506
chr10	101488801	.	ACTAGTAATTTTGTC	A	3115.88	PASS	AB=0.531;AC=7;AF=0.125;AN=56;BaseQRankSum=8.327;DP=648;FS=4.935;HRun=0;HaplotypeScore=240.4026;InbreedingCoeff=0.8124;MQ=87.25;MQ0=0;MQRankSum=-8.538;QD=59.92;ReadPosRankSum=2.887;VQSLOD=3.1881;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,8:17:18.06:757,18,0	1/1:1,4:5:9.03:378,9,0	0/0:24,0:24:72.24:0,72,4270	0/0:24,0:24:60.19:0,60,3253	0/0:29,0:29:87.30:0,87,5768	0/0:22,0:22:60.19:0,60,4033	0/0:16,0:16:45.15:0,45,3044	0/0:37,0:37:96.31:0,96,5568	0/0:23,0:23:69.24:0,69,4684	0/0:30,0:30:87.29:0,87,5839	0/0:28,0:28:81.28:0,81,5096	0/0:23,0:23:60.21:0,60,3994	0/0:18,0:18:54.17:0,54,3558	1/1:2,11:13:24.08:1013,24,0	0/0:33,0:33:99:0,99,6523	0/1:2,15:17:99:1110,0,180	0/0:41,0:41:99:0,120,7843	0/0:33,0:33:93.32:0,93,6107	0/0:17,0:17:42.13:0,42,2503	0/0:31,0:31:93.32:0,93,6067	0/0:22,0:22:63.22:0,63,4206	0/0:17,0:17:51.18:0,51,3563	0/0:18,0:18:54.19:0,54,3574	0/0:20,0:20:57.20:0,57,3769	0/0:15,0:15:42.13:0,42,2671	0/0:27,0:27:81.26:0,81,5336	0/0:34,0:34:99:0,102,6585	0/0:14,0:14:42.14:0,42,2631
chr10	101488913	.	CACACACATAG	C	705.30	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=3.589;DP=888;FS=5.154;HRun=0;HaplotypeScore=260.2179;InbreedingCoeff=0.4465;MQ=55.00;MQ0=11;MQRankSum=-0.246;QD=9.16;ReadPosRankSum=-2.575;VQSLOD=1.2471;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:59.54:0,60,2033	0/0:14,0:14:25.51:0,26,672	0/0:52,0:22:20.14:0,20,532	0/0:60,0:18:26.70:0,27,318	0/0:22,0:22:57.20:0,57,1709	0/0:25,0:25:66.20:0,66,1886	0/0:36,0:36:99:0,102,2563	0/0:38,0:38:99:0,99,1776	0/0:33,0:33:93.06:0,93,2944	0/0:36,0:36:90.26:0,90,2957	0/0:22,0:22:54.18:0,54,1826	0/1:32,0:32:99:370,0,879	0/1:24,0:24:99:148,0,406	0/0:31,0:31:54.03:0,54,1093	0/0:38,0:38:96.28:0,96,3368	0/0:29,0:28:61.64:0,62,1566	0/0:28,0:28:72.25:0,72,2704	1/1:5,16:21:14.87:300,15,0	0/0:26,0:25:26.08:0,26,968	0/0:17,0:17:48.14:0,48,1512	0/0:76,0:74:99:0,157,5418	0/0:23,0:23:51.16:0,51,1666	0/0:23,0:23:48.16:0,48,1095	0/0:39,0:39:93.03:0,93,2376	0/0:31,0:31:48.44:0,48,2421	0/0:24,0:23:63.17:0,63,1914	0/0:29,0:28:66.18:0,66,1960	0/0:11,0:11:33.11:0,33,1013
chr10	101488919	.	CATAG	C	981.46	PASS	AB=0.935;AC=6;AF=0.107;AN=56;BaseQRankSum=4.617;DP=859;FS=14.582;HRun=0;HaplotypeScore=166.9400;InbreedingCoeff=0.5305;MQ=52.92;MQ0=10;MQRankSum=0.181;QD=8.04;ReadPosRankSum=-1.901;VQSLOD=1.5311;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:41,5:45:25.30:25,0,1058	0/0:14,0:14:25.89:0,26,405	0/0:49,0:17:26.71:0,27,478	0/0:54,1:15:29:0,29,327	0/0:22,0:22:60.21:0,60,1227	0/0:26,0:26:69.22:0,69,1434	0/0:36,0:36:99:0,102,2075	0/0:42,0:42:99:0,117,2011	0/0:34,0:34:95.84:0,96,1977	0/0:33,0:33:92.79:0,93,1952	0/0:19,0:19:54.19:0,54,1268	0/1:30,0:31:99:549,0,127	1/1:22,0:23:2.42:308,2,0	0/0:29,0:29:52.39:0,52,801	0/0:37,0:37:99:0,99,2272	0/0:27,1:26:60.31:0,60,957	0/0:29,0:29:78.13:0,78,1778	1/1:21,0:22:21:224,21,0	0/0:23,0:23:24.49:0,24,874	0/0:16,0:16:48.15:0,48,1017	0/0:71,0:69:99:0,159,3560	0/0:20,0:20:49.92:0,50,995	0/0:21,0:21:46.03:0,46,688	0/0:41,0:41:86.18:0,86,1287	0/0:31,0:31:51.27:0,51,1597	0/0:24,0:23:68.41:0,68,1365	0/0:26,0:25:67.02:0,67,1377	0/0:11,0:11:33.11:0,33,738
chr10	101489969	.	T	TA	4194.23	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.396;DP=664;FS=1.349;HRun=0;HaplotypeScore=69.2410;InbreedingCoeff=0.9999;MQ=83.56;MQ0=0;MQRankSum=-2.741;QD=41.94;ReadPosRankSum=2.153;VQSLOD=4.4140;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:72.16:1108,72,0	1/1:0,15:15:33.11:527,33,0	0/0:20,0:20:60.19:0,60,822	0/0:18,0:18:45.37:0,45,632	0/0:25,0:25:75.25:0,75,1049	0/0:18,0:18:54.18:0,54,755	0/0:23,0:23:69.19:0,69,927	0/0:34,0:34:99:0,102,1383	0/0:34,0:34:99:0,102,1393	0/0:27,0:27:78.26:0,78,1077	0/0:23,0:23:69.21:0,69,929	0/0:28,0:28:84.28:0,84,1175	0/0:29,0:29:81.27:0,81,1127	1/1:0,15:15:45.15:716,45,0	0/0:27,0:27:78.26:0,78,1091	1/1:0,17:17:45.15:719,45,0	0/0:22,0:22:66.22:0,66,923	1/1:1,25:26:72.21:1124,72,0	0/0:26,0:26:78.24:0,78,1068	0/0:29,0:29:84.27:0,84,1160	0/0:28,0:28:84.28:0,84,1174	0/0:20,0:20:60.20:0,60,839	0/0:21,0:21:63.21:0,63,877	0/0:15,0:15:45.15:0,45,629	0/0:20,0:20:57.19:0,57,797	0/0:31,0:31:93.27:0,93,1238	0/0:32,0:30:96.28:0,96,1291	0/0:14,0:14:42.14:0,42,587
chr10	101490124	.	C	CGTT	11706.43	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-12.299;DP=760;FS=22.541;HRun=0;HaplotypeScore=99.3746;InbreedingCoeff=1.0000;MQ=81.50;MQ0=0;MQRankSum=-3.580;QD=61.61;ReadPosRankSum=2.870;VQSLOD=4.3207;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,45:53:99:3027,123,0	1/1:1,11:12:36.08:823,36,0	0/0:24,0:24:61.01:0,61,1195	0/0:22,0:22:49.61:0,50,1012	0/0:30,0:30:87.28:0,87,1584	0/0:23,0:22:69.22:0,69,1249	0/0:31,0:31:90.28:0,90,1604	0/0:20,0:20:57.20:0,57,1063	0/0:39,0:39:99:0,117,2149	0/0:32,0:32:96.32:0,96,1758	0/0:23,0:23:69.24:0,69,1283	1/1:2,30:34:87.20:2139,87,0	1/1:1,21:23:51.01:1243,51,0	1/1:1,12:17:39.13:943,39,0	0/0:46,0:46:99:0,138,2542	1/1:2,29:31:90.27:2161,90,0	0/0:28,0:28:84.27:0,84,1520	1/1:2,18:19:60.12:1370,60,0	0/0:23,0:23:66.22:0,66,1195	0/0:32,0:32:96.30:0,96,1721	0/0:42,0:42:99:0,123,2261	0/0:22,0:22:63.22:0,63,1170	0/0:21,0:21:63.22:0,63,1174	0/0:31,0:31:87.30:0,87,1587	0/0:15,0:14:45.15:0,45,835	0/0:30,0:30:87.30:0,87,1617	0/0:21,0:21:63.22:0,63,1167	0/0:15,0:15:42.10:0,42,708
chr10	101490918	.	GTT	G	857.89	PASS	AB=0.613;AC=10;AF=0.179;AN=56;BaseQRankSum=5.395;DP=531;FS=24.440;HRun=11;HaplotypeScore=76.1782;InbreedingCoeff=0.6942;MQ=58.01;MQ0=19;MQRankSum=-1.070;QD=9.64;ReadPosRankSum=2.719;VQSLOD=0.3084;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:30.02:318,30,0	1/1:1,6:7:18.03:192,18,0	0/0:35,0:10:26.12:0,26,349	0/0:32,0:11:16.08:0,16,173	0/0:24,0:24:54.63:0,55,787	0/0:16,0:16:36.12:0,36,532	0/0:21,0:20:43.39:0,43,638	0/0:22,0:23:50.64:0,51,719	0/0:19,0:20:44.62:0,45,616	0/0:29,0:30:65.70:0,66,934	0/0:10,0:10:21.07:0,21,316	0/1:6,1:15:11.75:12,0,36	0/0:3,0:16:33.61:0,34,120	1/1:3,14:17:21.47:238,21,0	0/0:21,0:20:46.35:0,46,654	0/1:5,10:15:23.68:196,0,24	0/0:29,0:29:84.23:0,84,1244	1/1:3,4:7:5.99:64,6,0	0/0:21,0:20:57.19:0,57,877	0/0:13,0:13:27.52:0,28,371	0/0:19,0:17:37.26:0,37,472	0/0:16,0:16:42.59:0,43,608	0/0:14,0:14:31.69:0,32,403	0/0:25,0:25:63.08:0,63,895	0/0:17,0:17:45.15:0,45,692	0/0:22,0:22:51.16:0,51,763	0/0:16,0:17:36.08:0,36,515	0/0:1,0:1:3.01:0,3,46
chr10	101491252	.	ACTCTCTCT	A	2033.80	PASS	AB=0.868;AC=18;AF=0.333;AN=54;BaseQRankSum=8.213;DP=567;FS=10.412;HRun=0;HaplotypeScore=121.0810;InbreedingCoeff=0.6044;MQ=64.65;MQ0=28;MQRankSum=-5.512;QD=10.54;ReadPosRankSum=0.432;VQSLOD=1.7583;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:16:11.42:89,0,11	1/1:10,0:9:2.61:76,3,0	./.	0/0:83,0:19:2.22:0,2,7	0/0:19,0:24:30.10:0,30,810	0/0:26,0:27:20.98:0,21,686	0/0:15,0:15:33.09:0,33,1059	1/1:21,6:27:15:179,15,0	0/0:16,0:16:21.07:0,21,801	0/0:13,0:13:12.04:0,12,435	0/0:11,0:11:21.07:0,21,730	0/0:14,0:14:24.08:0,24,824	0/0:16,0:16:39.08:0,39,1135	0/1:10,0:10:7.07:51,0,7	1/1:7,2:16:23.43:245,23,0	1/1:16,0:17:14.45:115,14,0	0/0:8,0:13:9.03:0,9,179	0/0:10,0:10:8.96:0,9,152	0/0:9,0:9:2.04:0,2,6	0/1:16,9:23:2.11:227,0,2	0/1:15,2:16:16.25:46,0,16	0/0:10,0:10:18.06:0,18,487	0/0:11,0:10:15.02:0,15,346	0/0:21,0:22:24.07:0,24,813	0/0:19,0:19:27.08:0,27,759	1/1:10,11:20:26.71:474,27,0	1/1:17,8:25:24.08:564,24,0	1/1:5,2:7:8.92:153,9,0
chr10	101491509	.	TA	T	1105.01	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.863;DP=569;FS=6.644;HRun=3;HaplotypeScore=55.5316;InbreedingCoeff=0.9994;MQ=88.61;MQ0=0;MQRankSum=-4.165;QD=30.69;ReadPosRankSum=2.744;VQSLOD=3.4221;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.23:0,78,1082	0/0:11,0:11:33.11:0,33,475	0/0:21,0:21:60.18:0,60,834	0/0:21,0:21:49.99:0,50,731	0/0:32,0:32:93.29:0,93,1297	0/0:14,0:14:39.13:0,39,561	0/0:12,0:12:36.07:0,36,447	0/0:36,0:36:99:0,105,1496	0/0:20,0:20:60.19:0,60,847	0/0:23,0:23:69.23:0,69,993	0/0:14,0:14:42.13:0,42,586	1/1:1,19:20:54.17:669,54,0	1/1:0,16:16:45.14:558,45,0	0/0:23,0:23:69.20:0,69,955	0/0:20,0:20:60.20:0,60,862	0/0:18,0:18:54.18:0,54,776	0/0:20,0:20:54.18:0,54,777	0/0:19,0:19:57.19:0,57,818	0/0:18,0:18:51.17:0,51,719	0/0:26,0:26:72.24:0,72,1035	0/0:27,0:27:78.23:0,78,1085	0/0:11,0:10:30.10:0,30,432	0/0:13,0:13:39.13:0,39,561	0/0:17,0:17:45.15:0,45,647	0/0:31,0:31:93.31:0,93,1339	0/0:19,0:19:57.18:0,57,789	0/0:29,0:29:87.28:0,87,1233	0/0:12,0:12:36.12:0,36,516
chr10	101491725	.	C	CA	4302.01	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-8.217;DP=568;FS=6.277;HRun=4;HaplotypeScore=57.4367;InbreedingCoeff=0.9873;MQ=84.08;MQ0=0;MQRankSum=-1.260;QD=37.09;ReadPosRankSum=1.964;VQSLOD=4.9402;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:72.24:985,72,0	1/1:0,9:9:24.08:328,24,0	0/0:18,0:17:19.79:0,20,437	0/0:19,0:19:38.30:0,38,357	0/0:23,0:23:69.20:0,69,782	0/0:22,0:22:66.19:0,66,749	0/0:11,0:11:30.05:0,30,320	0/0:28,0:28:81.23:0,81,919	0/0:21,1:22:22.14:0,22,640	0/0:31,0:31:84.24:0,84,952	0/0:25,0:25:63.18:0,63,715	1/1:0,17:17:45.15:616,45,0	1/1:1,16:17:45.15:616,45,0	1/1:0,18:18:51.17:698,51,0	0/0:18,0:18:51.15:0,51,579	1/1:1,15:16:42.14:575,42,0	0/0:21,0:21:60.15:0,60,668	1/1:1,11:12:36.12:486,36,0	0/0:21,0:21:63.17:0,63,706	0/0:30,0:30:81.23:0,81,919	0/0:13,0:13:33.09:0,33,374	0/0:14,0:14:39.11:0,39,442	0/0:21,0:21:63.16:0,63,705	0/0:16,0:16:36.10:0,36,408	0/0:38,0:38:99:0,114,1293	0/0:30,0:30:84.24:0,84,953	0/0:28,0:28:78.22:0,78,885	0/0:3,0:3:9.01:0,9,91
chr10	101492170	.	T	TA	3990.20	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-4.454;DP=503;FS=2.301;HRun=8;HaplotypeScore=66.8642;InbreedingCoeff=0.9769;MQ=86.23;MQ0=0;MQRankSum=-0.199;QD=26.43;ReadPosRankSum=-0.522;VQSLOD=4.1816;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:71.98:0,72,646	0/0:7,0:7:14.99:0,15,132	0/0:26,0:24:38.16:0,38,381	0/0:28,0:24:35.40:0,35,311	0/0:23,0:23:66.02:0,66,598	0/0:26,0:26:68.97:0,69,613	0/0:15,0:15:41.99:0,42,375	1/1:7,24:31:72.15:798,72,0	0/0:8,0:8:20.99:0,21,186	0/0:16,0:16:42.01:0,42,380	0/0:25,0:25:59.87:0,60,582	0/0:17,0:17:42:0,42,379	0/0:12,0:12:33.02:0,33,302	0/0:10,0:10:27.01:0,27,247	1/1:5,20:25:54.16:625,54,0	0/0:20,0:20:57.02:0,57,517	0/0:29,0:29:77.99:0,78,697	0/0:7,0:7:20.94:0,21,177	1/1:4,11:15:36.10:409,36,0	1/1:3,17:20:51.04:548,51,0	1/1:0,5:5:9.03:104,9,0	0/0:13,0:13:36.01:0,36,324	0/0:18,1:19:19.30:0,19,428	0/0:9,0:9:15:0,15,137	0/0:14,0:14:33.01:0,33,302	1/1:6,21:28:66.06:742,66,0	1/1:2,19:21:54.16:625,54,0	1/1:0,6:6:12.04:139,12,0
chr10	101493648	.	TA	T	4787.70	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=10.635;DP=481;FS=9.048;HRun=11;HaplotypeScore=50.5265;InbreedingCoeff=0.9936;MQ=73.21;MQ0=0;MQRankSum=-1.707;QD=18.27;ReadPosRankSum=3.571;VQSLOD=5.5993;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,12:13:26.96:222,27,0	1/1:0,10:10:29.97:246,30,0	0/0:8,0:8:14.86:0,15,131	0/0:13,0:12:20.23:0,20,175	0/0:30,1:31:63.96:0,64,800	0/0:27,0:27:72:0,72,742	0/0:10,0:10:21.05:0,21,224	1/1:14,22:36:36.87:501,37,0	0/0:10,0:10:24.04:0,24,247	0/0:18,0:18:51.13:0,51,544	0/0:20,0:20:51.07:0,51,518	1/1:2,11:13:29.96:246,30,0	1/1:2,16:18:35.96:296,36,0	1/1:0,12:13:38:301,38,0	1/1:3,12:15:32.95:271,33,0	1/1:1,13:14:35.96:296,36,0	0/0:10,0:10:24.06:0,24,256	1/1:2,9:11:26.97:222,27,0	1/1:2,9:11:26.95:219,27,0	1/1:4,25:29:71.75:576,72,0	1/1:3,13:16:38.95:320,39,0	0/0:19,0:19:48.11:0,48,504	0/0:22,0:22:60.13:0,60,631	0/0:10,0:10:26.96:0,27,271	0/0:20,0:20:48.12:0,48,512	1/1:5,16:21:18.93:358,19,0	1/1:5,25:30:65.52:541,66,0	1/1:5,7:12:20.94:172,21,0
chr10	101493874	.	A	AT	4299.15	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-0.335;DP=432;FS=2.719;HRun=1;HaplotypeScore=70.5178;InbreedingCoeff=0.9859;MQ=75.14;MQ0=2;MQRankSum=-2.344;QD=18.69;ReadPosRankSum=0.915;VQSLOD=5.1684;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:34.60:234,35,0	1/1:7,0:7:21:186,21,0	0/0:28,0:18:20.35:0,20,222	0/0:13,0:7:10.78:0,11,89	0/0:12,0:12:25.17:0,25,197	0/0:21,0:19:44.84:0,45,436	0/0:9,0:9:26.32:0,26,224	1/1:8,21:29:74.12:574,74,0	0/0:9,0:9:20.98:0,21,184	0/0:17,0:17:50.30:0,50,484	0/0:19,0:19:36.03:0,36,353	1/1:14,0:14:41.44:311,41,0	1/1:16,0:16:35.55:268,36,0	1/1:14,0:14:38.20:287,38,0	1/1:8,0:8:17.94:150,18,0	1/1:22,1:23:65.03:506,65,0	0/0:19,0:19:48.03:0,48,473	1/1:8,0:8:17.71:131,18,0	1/1:18,0:18:47.58:347,48,0	1/1:19,0:19:48.42:333,48,0	1/1:10,1:10:17.49:129,17,0	0/0:10,0:10:26.98:0,27,246	0/0:14,0:14:24.33:0,24,180	0/0:12,0:12:16.60:0,17,130	0/0:18,0:18:41.07:0,41,354	1/1:16,3:19:41.61:377,42,0	1/1:23,1:24:50.80:338,51,0	1/1:8,0:8:20.05:127,20,0
chr10	101494813	.	TACAC	T	1262.86	PASS	AB=0.877;AC=15;AF=0.288;AN=52;BaseQRankSum=1.911;DP=563;FS=1.427;HRun=0;HaplotypeScore=95.2049;InbreedingCoeff=0.6802;MQ=59.81;MQ0=11;MQRankSum=-1.620;QD=8.20;ReadPosRankSum=1.231;VQSLOD=2.4465;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:35:20.99:0,21,378	0/0:5,0:10:10.09:0,10,114	./.	./.	0/0:9,0:9:11.99:0,12,144	0/0:12,0:16:22.36:0,22,444	0/1:24,1:26:5.13:5,0,851	0/1:25,0:24:14.14:14,0,90	0/0:10,0:10:18.06:0,18,383	0/0:18,0:23:37.35:0,37,726	0/0:11,0:13:20.58:0,21,417	0/0:13,0:24:24.52:0,25,416	0/0:16,0:27:33.58:0,34,625	0/0:22,0:33:30.10:0,30,523	1/1:9,7:18:20.94:230,21,0	0/0:12,0:21:18.04:0,18,318	0/0:27,0:28:44.87:0,45,868	0/0:6,0:17:21.07:0,21,384	1/1:10,2:14:11.54:151,12,0	1/1:8,5:15:8.48:196,8,0	1/1:8,4:12:12.02:165,12,0	0/0:15,0:15:26.86:0,27,506	0/0:14,0:15:8.75:0,9,107	0/0:27,0:27:39.12:0,39,851	0/0:18,0:18:21.07:0,21,499	1/1:10,7:17:23.96:321,24,0	1/1:14,6:22:11.58:318,12,0	0/1:2,2:4:17.85:41,0,18
chr10	101495351	.	C	CTG	1745.88	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.478;DP=817;FS=0.000;HRun=0;HaplotypeScore=108.3334;InbreedingCoeff=0.9994;MQ=65.63;MQ0=1;MQRankSum=-0.879;QD=29.59;ReadPosRankSum=2.902;VQSLOD=4.8711;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,1797	0/0:11,0:11:30.05:0,30,394	0/0:30,0:22:34.27:0,34,644	0/0:23,0:19:40.35:0,40,494	0/0:31,0:31:93.31:0,93,1402	0/0:23,0:23:69.16:0,69,985	0/0:30,0:30:90.28:0,90,1325	0/0:48,0:48:99:0,126,1759	0/0:30,0:30:87.24:0,87,1243	0/0:34,0:34:93.28:0,93,1378	0/0:29,0:29:84.23:0,84,1192	1/1:2,21:23:38.07:765,38,0	1/1:2,33:36:66.22:1103,66,0	0/0:36,0:36:99:0,105,1414	0/0:38,0:38:99:0,105,1580	0/0:29,0:29:87.25:0,87,1263	0/0:20,0:20:57.17:0,57,840	0/0:12,0:12:36.12:0,36,548	0/0:22,0:22:60.15:0,60,784	0/0:28,0:28:81.23:0,81,1169	0/0:46,0:46:99:0,129,1880	0/0:28,0:28:53.87:0,54,1092	0/0:26,0:26:69.15:0,69,932	0/0:29,0:29:87.26:0,87,1280	0/0:37,0:37:99:0,108,1592	0/0:34,0:34:99:0,99,1442	0/0:27,0:27:78.17:0,78,1071	0/0:12,0:12:33.09:0,33,475
chr10	101495762	.	A	ATGTGTGTGTG	3623.58	PASS	AB=0.631;AC=9;AF=0.161;AN=56;BaseQRankSum=-2.232;DP=780;FS=0.660;HRun=0;HaplotypeScore=230.7159;InbreedingCoeff=0.8076;MQ=60.32;MQ0=8;MQRankSum=-8.688;QD=31.79;ReadPosRankSum=-2.774;VQSLOD=2.7644;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,11:30:6.18:199,6,0	1/1:11,4:15:18.03:653,18,0	0/0:40,0:19:11.59:0,12,174	0/0:51,0:21:15.03:0,15,282	0/0:34,0:34:72.23:0,72,1966	0/0:30,0:31:87.30:0,87,2627	0/0:28,0:28:57.18:0,57,1639	0/0:22,0:23:30.09:0,30,760	0/0:31,0:31:66.23:0,66,1900	0/0:32,0:33:81.22:0,81,2150	0/0:21,0:21:45.15:0,45,1285	0/0:9,0:36:78.12:0,78,847	0/0:7,0:31:56.94:0,57,595	1/1:6,5:14:12.51:556,13,0	0/0:36,0:39:99:0,108,3143	0/1:17,19:41:43.87:1864,0,44	0/0:18,0:20:39.06:0,39,1132	1/1:6,0:14:12.04:352,12,0	0/0:20,0:19:39.09:0,39,906	0/0:33,0:35:81.26:0,81,2271	0/0:19,0:19:39.60:0,40,1119	0/0:29,0:29:50.27:0,50,2165	0/0:27,0:28:54.15:0,54,1455	0/0:20,0:22:54.17:0,54,1493	0/0:19,0:20:57.19:0,57,1649	0/0:30,0:32:84.25:0,84,2233	0/0:30,0:30:75.24:0,75,2183	0/0:10,0:11:21.84:0,22,477
chr10	101498296	.	TAC	T	706.03	PASS	AB=0.968;AC=26;AF=0.500;AN=52;BaseQRankSum=7.471;DP=602;FS=1.204;HRun=0;HaplotypeScore=110.9708;InbreedingCoeff=-0.0991;MQ=56.84;MQ0=13;MQRankSum=-1.764;QD=1.71;ReadPosRankSum=1.436;VQSLOD=2.1549;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:0.49:0,0,2	1/1:10,0:10:9.14:48,9,0	./.	./.	1/1:6,7:13:6.57:47,7,0	0/1:20,1:21:41.91:42,0,133	0/1:19,4:22:5.87:6,0,307	0/1:34,0:30:4.16:4,0,30	0/1:26,1:25:56.97:57,0,375	0/0:22,1:23:0.04:0,0,293	0/1:19,1:21:14.39:14,0,304	0/1:18,0:18:4.96:38,0,5	0/1:12,0:12:9.81:66,0,10	1/1:19,0:17:7.20:40,7,0	1/1:18,0:17:14.78:96,15,0	1/1:14,0:15:6.18:29,6,0	0/0:42,1:43:10.34:0,10,816	0/0:8,0:8:10.28:0,10,52	1/1:18,0:18:4.94:37,5,0	0/1:25,1:26:30.71:54,0,31	0/1:23,0:23:5.87:6,0,81	0/1:21,0:21:38.17:38,0,132	0/0:25,0:25:20.90:0,21,277	0/1:23,3:25:4.55:5,0,305	0/0:12,0:12:8.53:0,9,148	0/1:32,0:27:31.89:129,0,32	0/1:28,0:28:1.85:86,0,2	0/1:6,0:6:11.98:18,0,12
chr10	101498328	.	CACACACACAG	C	1997.24	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=4.201;DP=613;FS=11.986;HRun=0;HaplotypeScore=195.5292;InbreedingCoeff=0.4695;MQ=55.00;MQ0=14;MQRankSum=-4.380;QD=9.94;ReadPosRankSum=-3.995;VQSLOD=0.9020;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,4:35:17.81:285,18,0	1/1:7,4:11:20.74:474,21,0	0/0:22,0:11:29.69:0,30,238	0/1:20,0:14:1.34:1,0,234	0/0:18,0:18:35.85:0,36,557	0/0:16,0:15:39.80:0,40,1035	0/0:22,0:21:45.55:0,46,1316	0/1:37,0:33:99:357,0,235	0/0:26,0:24:62.87:0,63,1840	0/0:25,0:23:67.43:0,67,1763	0/0:22,0:22:60.08:0,60,1660	0/0:17,0:17:15.47:0,15,422	0/1:16,0:16:26.35:26,0,493	1/1:10,4:12:20.96:441,21,0	0/0:25,0:23:15.05:0,15,404	1/1:10,1:11:17.94:314,18,0	0/0:40,0:40:99:0,111,3734	0/1:8,0:8:17.24:100,0,17	0/1:16,0:16:99:170,0,314	0/0:31,0:31:36.47:0,36,798	0/0:31,0:31:18.06:0,18,522	0/0:18,0:18:36.67:0,37,874	0/0:18,0:18:51.02:0,51,1338	0/0:30,0:29:72.47:0,72,1814	0/0:14,0:13:33.98:0,34,873	0/0:29,0:25:23.93:0,24,1365	0/1:32,0:32:0.08:0,0,484	0/0:8,0:8:6.02:0,6,163
chr10	101498334	.	CACAG	C	1791.99	PASS	AB=0.983;AC=21;AF=0.375;AN=56;BaseQRankSum=4.465;DP=595;FS=2.723;HRun=0;HaplotypeScore=141.9443;InbreedingCoeff=0.4450;MQ=57.37;MQ0=14;MQRankSum=-2.795;QD=6.45;ReadPosRankSum=-1.777;VQSLOD=2.4967;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,3:30:8.17:58,8,0	1/1:8,0:8:17.99:210,18,0	0/0:25,0:14:37.11:0,37,289	0/1:19,0:12:1.49:1,0,209	0/0:18,0:18:13.13:0,13,255	0/0:14,0:14:29.47:0,29,502	0/0:23,0:22:51.03:0,51,760	1/1:36,0:32:9.31:523,9,0	0/0:26,0:24:30.78:0,31,905	0/0:25,0:23:66.14:0,66,979	0/0:21,0:21:22.75:0,23,778	0/1:16,1:17:22.82:124,0,23	0/1:15,0:15:11.77:91,0,12	1/1:13,0:11:17.95:190,18,0	0/0:29,0:27:4.79:0,5,11	1/1:10,1:11:12.29:95,12,0	0/0:39,0:39:75.01:0,75,1903	1/1:7,0:7:11.11:69,11,0	1/1:15,0:15:28.03:263,28,0	0/1:28,2:30:99:132,0,118	0/0:29,0:29:9.88:0,10,99	0/1:17,0:17:2.71:3,0,438	0/0:19,0:19:47.97:0,48,739	0/0:28,0:27:69.45:0,69,1006	0/0:13,0:12:26.72:0,27,335	0/1:27,0:24:77.69:152,0,78	0/1:32,0:32:27.60:70,0,28	0/0:8,0:8:3.90:0,4,53
chr10	101498336	.	CAG	C	2940.88	PASS	AB=0.687;AC=29;AF=0.518;AN=56;BaseQRankSum=6.931;DP=587;FS=4.446;HRun=0;HaplotypeScore=122.1465;InbreedingCoeff=0.7923;MQ=57.61;MQ0=14;MQRankSum=-3.785;QD=9.13;ReadPosRankSum=-1.810;VQSLOD=3.1258;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:31:8.20:42,8,0	1/1:8,0:8:17.13:110,17,0	0/0:27,0:16:43.11:0,43,346	0/1:19,0:12:1.45:1,0,209	0/0:18,0:18:27.06:0,27,238	0/0:14,0:14:22.43:0,22,327	0/0:23,0:22:42.44:0,42,545	1/1:36,1:33:78.73:688,79,0	0/0:26,0:24:28.24:0,28,656	0/0:24,0:22:57.35:0,57,676	0/0:21,0:21:41.99:0,42,580	1/1:10,3:13:17.92:170,18,0	1/1:12,3:15:28.83:295,29,0	1/1:13,0:11:17.40:121,17,0	1/1:0,28:27:15.05:214,15,0	1/1:10,0:10:10.44:66,10,0	0/0:38,0:38:80.25:0,80,1302	1/1:7,0:7:16.61:94,17,0	1/1:1,16:17:46.73:404,47,0	1/1:7,22:29:19.70:159,20,0	0/1:3,25:28:16.79:37,0,17	0/0:17,0:17:27.44:0,27,347	0/0:17,0:17:47.95:0,48,554	0/0:28,0:27:56.95:0,57,701	0/0:12,0:11:26.97:0,27,269	1/1:9,15:21:38.39:466,38,0	1/1:3,31:34:23.76:257,24,0	0/1:1,7:8:26.94:36,0,27
chr10	101498355	.	CTGTTTGTT	C	3681.09	PASS	AB=0.727;AC=9;AF=0.161;AN=56;BaseQRankSum=7.160;DP=533;FS=1.961;HRun=0;HaplotypeScore=158.6967;InbreedingCoeff=0.8315;MQ=60.68;MQ0=3;MQRankSum=-10.038;QD=53.35;ReadPosRankSum=-2.480;VQSLOD=2.9583;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,24:31:69.24:1807,69,0	1/1:3,5:8:15.05:388,15,0	0/0:34,0:20:24.08:0,24,892	0/0:26,0:19:33.11:0,33,1069	0/0:20,0:20:51.18:0,51,2074	0/0:13,0:13:39.12:0,39,1392	0/0:16,0:16:42.13:0,42,1672	0/0:41,0:41:87.29:0,87,3401	0/0:20,0:20:54.19:0,54,2220	0/0:17,0:17:30.10:0,30,1214	0/0:14,0:14:33.10:0,33,1223	0/0:7,0:16:33.11:0,33,1123	0/0:10,0:15:45.15:0,45,1588	1/1:2,9:11:24.08:628,24,0	0/0:24,0:23:11.89:0,12,452	1/1:1,10:11:30.10:785,30,0	0/0:31,0:31:72.23:0,72,2782	0/1:5,3:8:32.96:73,0,33	0/0:19,0:19:42.14:0,42,1632	0/0:19,0:19:57.20:0,57,2156	0/0:26,0:26:18.05:0,18,660	0/0:13,0:13:33.11:0,33,1391	0/0:18,0:18:45.15:0,45,1899	0/0:24,0:24:70.48:0,70,2639	0/0:10,0:10:24.08:0,24,1013	0/0:11,0:11:27.09:0,27,1064	0/0:27,0:27:11.66:0,12,413	0/0:10,0:10:9.03:0,9,292
chr10	101498865	.	A	AGT	601.34	PASS	AB=0.945;AC=20;AF=0.370;AN=54;BaseQRankSum=3.849;DP=624;FS=5.673;HRun=0;HaplotypeScore=119.5374;InbreedingCoeff=0.3768;MQ=72.57;MQ0=10;MQRankSum=-4.629;QD=1.88;ReadPosRankSum=-3.332;VQSLOD=1.1110;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:8.50:0,8,93	0/0:11,0:11:16.11:0,16,136	./.	0/1:29,0:24:0:0,0,0	0/0:15,0:16:8.83:0,9,67	0/0:13,0:13:5.88:0,6,61	0/0:18,0:19:17.86:0,18,167	1/1:40,0:39:2.49:6,2,0	0/0:20,0:19:5.91:0,6,48	0/1:27,0:27:14.32:14,0,46	0/0:16,0:15:9.01:0,9,90	1/1:31,0:28:5.91:60,6,0	1/1:22,0:22:10.77:82,11,0	0/0:14,0:15:11.81:0,12,96	0/0:21,0:21:15.03:0,15,157	0/0:16,0:18:20.84:0,21,187	0/0:19,0:18:7.70:0,8,141	1/1:17,0:18:15.13:96,15,0	0/1:19,0:19:27.74:28,0,55	1/1:12,3:18:3.01:44,3,0	0/1:29,7:34:18.20:38,0,18	0/0:26,0:26:3.47:0,3,31	0/0:19,0:21:5.02:0,5,64	0/0:18,0:17:27.90:0,28,269	0/1:23,0:25:23.50:24,0,84	1/1:17,4:23:15.52:193,16,0	0/1:18,2:21:34.91:35,0,50	1/1:8,0:8:15.01:153,15,0
chr10	101498872	.	G	GTA	225.91	PASS	AB=0.889;AC=5;AF=0.089;AN=56;BaseQRankSum=7.315;DP=672;FS=5.440;HRun=0;HaplotypeScore=104.1469;InbreedingCoeff=0.4115;MQ=67.39;MQ0=14;MQRankSum=0.806;QD=2.57;ReadPosRankSum=-0.631;VQSLOD=1.9080;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,101,854	0/0:14,0:14:41.99:0,42,426	0/0:30,0:20:19.83:0,20,363	0/0:26,0:21:22.45:0,22,279	0/0:17,0:17:35.79:0,36,330	0/0:21,0:21:38.78:0,39,354	0/0:22,0:22:56.93:0,57,571	0/0:38,0:37:86.14:0,86,802	0/0:23,0:22:50.86:0,51,440	0/0:30,0:30:86.52:0,87,780	0/0:19,0:18:41.85:0,42,401	0/1:16,16:29:35.19:47,0,35	1/1:20,1:21:25.37:268,25,0	0/0:14,0:14:35.33:0,35,348	0/0:20,0:20:56.98:0,57,570	0/0:17,0:17:45:0,45,487	0/0:22,0:20:53.83:0,54,516	0/0:18,0:18:48.11:0,48,319	0/0:17,0:17:44.72:0,45,410	0/0:21,0:21:20.71:0,21,279	0/0:41,0:37:58.90:0,59,609	0/0:28,0:28:74.86:0,75,627	0/0:26,0:26:59.76:0,60,517	0/0:19,0:18:42.05:0,42,520	0/0:22,0:22:45.87:0,46,437	0/1:25,0:23:0.71:1,0,333	0/0:27,0:26:46.25:0,46,502	0/1:10,0:9:11.40:24,0,11
chr10	101500093	.	TTAAAG	T	387.34	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.864;DP=251;FS=4.184;HRun=0;HaplotypeScore=47.1834;InbreedingCoeff=0.7881;MQ=78.21;MQ0=0;MQRankSum=-0.469;QD=38.73;ReadPosRankSum=1.925;VQSLOD=3.2033;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39.13:0,39,1192	0/0:4,0:4:12.04:0,12,369	0/0:12,0:12:24.06:0,24,635	0/0:3,0:3:9.03:0,9,270	0/0:12,0:11:33.11:0,33,976	0/0:12,0:12:33.11:0,33,1014	0/0:4,0:4:9.01:0,9,208	0/0:30,0:30:84.29:0,84,2557	0/0:9,0:9:24.08:0,24,706	0/0:7,0:6:18.06:0,18,522	0/0:12,0:11:27.09:0,27,759	1/1:0,4:4:12.04:249,12,0	1/1:2,4:6:12.04:249,12,0	0/0:4,0:4:12.04:0,12,313	0/0:4,0:4:12.04:0,12,369	0/0:12,0:12:33.11:0,33,960	0/0:14,0:14:42.14:0,42,1250	0/0:18,0:18:45.15:0,45,1367	0/0:8,0:8:21.07:0,21,627	0/0:9,0:9:27.09:0,27,782	0/0:8,0:8:24.08:0,24,738	0/0:8,0:7:18.06:0,18,552	0/0:5,0:5:15.05:0,15,426	0/0:2,0:2:6.02:0,6,184	0/0:5,0:5:15.05:0,15,461	0/0:12,0:12:36.12:0,36,1068	0/0:9,0:9:18.06:0,18,553	0/0:4,0:4:12.04:0,12,369
chr10	101500192	.	CTA	C	854.94	PASS	AB=0.868;AC=18;AF=0.391;AN=46;BaseQRankSum=5.904;DP=210;FS=1.678;HRun=0;HaplotypeScore=48.5370;InbreedingCoeff=0.4884;MQ=91.09;MQ0=10;MQRankSum=-4.108;QD=6.95;ReadPosRankSum=1.211;VQSLOD=2.5494;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:1.96:30,2,0	1/1:2,0:2:5.68:28,6,0	0/0:32,0:9:4.73:0,5,52	0/1:70,0:29:8.60:9,0,110	0/0:2,0:1:3.01:0,3,35	0/0:7,0:7:15.05:0,15,248	./.	0/0:23,0:23:57.19:0,57,912	0/0:2,0:2:6.02:0,6,99	0/1:2,1:3:28.08:28,0,90	0/0:1,0:1:3.01:0,3,50	1/1:0,2:2:6.02:75,6,0	1/1:0,4:4:12.04:150,12,0	1/1:3,0:3:8.52:42,9,0	0/0:3,0:3:9.03:0,9,147	1/1:8,0:8:19.72:95,20,0	1/1:2,16:18:42.13:525,42,0	1/1:8,0:7:7.24:32,7,0	0/0:1,0:1:3.01:0,3,50	0/0:2,0:1:3.01:0,3,50	0/0:1,0:1:3.01:0,3,50	./.	./.	./.	0/0:3,0:3:9.03:0,9,147	./.	0/0:1,0:1:3.01:0,3,50	0/0:8,0:7:21.07:0,21,347
chr10	101500203	.	TATATTA	T	1123.77	PASS	AB=0.833;AC=10;AF=0.200;AN=50;BaseQRankSum=5.092;DP=218;FS=8.222;HRun=0;HaplotypeScore=59.4860;InbreedingCoeff=0.4416;MQ=96.14;MQ0=7;MQRankSum=-4.639;QD=20.81;ReadPosRankSum=0.671;VQSLOD=1.5416;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:2,2:4:71.57:141,0,72	1/1:0,2:2:6.02:153,6,0	0/1:32,0:11:25.62:26,0,83	0/0:75,0:32:22.99:0,23,366	0/0:4,0:3:9.03:0,9,163	0/0:6,0:6:18.06:0,18,616	0/0:1,0:1:3.01:0,3,37	0/0:22,0:22:66.22:0,66,2030	0/0:2,0:2:6.02:0,6,225	0/0:4,0:4:11.83:0,12,288	0/0:1,0:1:3.01:0,3,113	0/0:2,0:2:6.02:0,6,99	0/0:4,0:4:12.04:0,12,196	1/1:0,3:3:9.03:230,9,0	0/0:3,0:3:9.03:0,9,301	1/1:0,7:7:21.07:526,21,0	0/0:19,0:19:48.12:0,48,762	1/1:3,2:5:9.03:193,9,0	0/0:2,0:2:6.02:0,6,224	0/0:2,0:1:3.01:0,3,113	0/0:1,0:1:3.01:0,3,113	./.	./.	./.	0/0:4,0:4:12.04:0,12,349	0/0:2,0:2:6.02:0,6,100	0/0:2,0:2:6.02:0,6,165	0/0:8,0:8:24.08:0,24,876
chr10	101500227	.	C	CTA	953.73	PASS	AB=0.856;AC=13;AF=0.295;AN=44;BaseQRankSum=6.018;DP=211;FS=1.941;HRun=0;HaplotypeScore=52.5684;InbreedingCoeff=0.5243;MQ=84.61;MQ0=14;MQRankSum=-4.093;QD=7.82;ReadPosRankSum=0.025;VQSLOD=3.0702;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,4:6:12.04:203,12,0	1/1:0,2:2:6.02:101,6,0	0/1:26,0:8:3.94:4,0,39	0/1:59,1:23:31.80:44,0,32	0/0:2,0:2:6.02:0,6,78	0/0:8,0:8:24.08:0,24,312	./.	0/0:23,0:23:45.13:0,45,561	0/0:2,0:2:6.02:0,6,78	0/0:5,0:5:15.05:0,15,195	0/0:3,0:3:9.03:0,9,117	./.	1/1:0,6:6:15.05:254,15,0	1/1:1,3:4:9.03:152,9,0	0/0:3,0:3:9.03:0,9,117	1/1:1,5:6:15.05:254,15,0	0/0:15,0:15:42.06:0,42,509	0/1:2,3:4:29.96:93,0,30	0/0:5,0:5:12.04:0,12,154	0/0:1,0:1:3.01:0,3,39	./.	./.	./.	./.	0/0:2,0:2:6.02:0,6,78	0/0:4,0:4:12.04:0,12,156	0/0:7,0:7:21.07:0,21,273	0/0:9,0:8:18.06:0,18,233
chr10	101500242	.	CTA	C	168.81	PASS	AB=0.865;AC=8;AF=0.182;AN=44;BaseQRankSum=1.034;DP=211;FS=1.195;HRun=0;HaplotypeScore=54.2187;InbreedingCoeff=-0.0905;MQ=86.99;MQ0=15;MQRankSum=-0.960;QD=3.52;ReadPosRankSum=1.244;VQSLOD=1.7813;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:11.95:0,12,93	0/0:3,0:3:3.01:0,3,40	0/0:30,0:11:9.77:0,10,77	0/0:57,0:19:13.38:0,13,143	0/0:2,0:2:6.02:0,6,96	0/0:10,0:10:18.06:0,18,278	./.	0/1:17,3:20:65.84:66,0,440	0/1:2,0:2:29.73:30,0,42	0/0:7,0:7:21.06:0,21,315	0/0:4,0:4:12.04:0,12,192	./.	0/0:6,0:6:9.03:0,9,132	0/0:3,0:3:5.98:0,6,47	0/0:3,0:3:9.03:0,9,137	0/0:5,0:5:8.99:0,9,82	0/0:13,0:15:33.09:0,33,485	0/0:7,0:6:3.88:0,4,115	0/0:4,0:4:9.03:0,9,143	0/1:2,0:2:29.96:30,0,42	./.	./.	./.	./.	0/1:2,2:4:59.92:60,0,84	0/1:6,1:7:14.76:15,0,267	0/1:5,2:7:53.90:54,0,174	1/1:5,1:5:3.01:36,3,0
chr10	101500260	.	A	ATG	602.58	PASS	AB=0.757;AC=9;AF=0.167;AN=54;BaseQRankSum=5.496;DP=224;FS=0.897;HRun=0;HaplotypeScore=44.0965;InbreedingCoeff=0.4025;MQ=90.05;MQ0=5;MQRankSum=-3.705;QD=11.37;ReadPosRankSum=1.882;VQSLOD=3.1246;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:12:12.04:229,12,0	0/1:2,1:3:13.51:46,0,14	0/0:26,0:14:15.99:0,16,112	0/0:32,0:17:10.75:0,11,137	0/0:4,0:4:12.01:0,12,141	0/0:9,0:9:24.02:0,24,280	0/0:4,0:4:11.98:0,12,98	0/0:24,0:24:72.03:0,72,779	0/0:3,0:3:8.98:0,9,91	0/0:8,0:8:24.07:0,24,329	0/0:6,0:6:18.03:0,18,233	0/0:3,0:3:5.99:0,6,50	0/0:8,0:8:11.95:0,12,124	1/1:1,2:3:9.02:139,9,0	0/0:4,0:4:11.99:0,12,137	1/1:5,2:7:5.34:173,5,0	0/1:15,0:15:9.02:9,0,460	0/1:1,1:12:14.22:145,0,14	0/0:6,0:6:18.01:0,18,195	0/0:4,0:4:11.98:0,12,115	0/0:1,0:1:2.99:0,3,24	0/0:2,0:2:5.99:0,6,50	0/0:4,0:4:8.99:0,9,74	./.	0/0:4,0:4:11.97:0,12,133	0/0:8,0:8:24.04:0,24,322	0/0:6,0:6:17.99:0,18,224	0/0:2,0:2:2.98:0,3,21
chr10	101500411	.	G	GA	3606.87	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-12.898;DP=385;FS=5.852;HRun=7;HaplotypeScore=35.3198;InbreedingCoeff=0.9539;MQ=76.95;MQ0=0;MQRankSum=0.971;QD=30.31;ReadPosRankSum=-2.020;VQSLOD=3.0334;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:39.05:0,39,371	0/0:5,0:5:15.02:0,15,145	0/0:13,0:13:27.26:0,27,227	0/0:8,0:8:10.57:0,11,89	0/0:19,0:19:54.03:0,54,503	0/0:24,0:24:69.10:0,69,661	0/0:12,0:13:35.09:0,35,325	1/1:2,31:33:93.27:1111,93,0	0/0:12,0:12:33.05:0,33,319	0/0:21,0:21:48.07:0,48,464	0/0:13,0:13:39.06:0,39,377	0/0:7,0:7:21.03:0,21,203	0/0:15,0:15:45.07:0,45,434	0/0:16,0:16:48.08:0,48,463	1/1:2,5:7:12.04:145,12,0	0/0:15,0:15:45.07:0,45,434	0/0:16,0:16:45.07:0,45,434	0/0:17,0:17:48.08:0,48,463	1/1:1,18:19:54.15:641,54,0	1/1:0,9:9:27.08:326,27,0	1/1:1,8:9:24.07:290,24,0	0/0:7,0:7:18.03:0,18,174	0/0:12,0:12:33.04:0,33,313	0/0:7,0:7:21.03:0,21,203	0/0:10,0:10:27.04:0,27,261	1/1:4,10:14:4.12:333,4,0	1/1:2,17:19:48.15:580,48,0	1/1:2,7:9:15.05:181,15,0
chr10	101501537	.	A	AGTGT	5709.79	PASS	AB=0.710;AC=26;AF=0.464;AN=56;BaseQRankSum=8.208;DP=927;FS=3.096;HRun=0;HaplotypeScore=237.8804;InbreedingCoeff=0.4401;MQ=67.75;MQ0=6;MQRankSum=-0.859;QD=10.09;ReadPosRankSum=-0.280;VQSLOD=4.1780;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:17.85:145,18,0	1/1:4,0:8:2.94:18,3,0	0/0:42,0:30:8.96:0,9,101	0/1:39,0:28:8.96:9,0,124	0/0:22,0:23:24.07:0,24,362	0/0:25,0:26:6.92:0,7,618	0/0:22,0:27:0.21:0,0,564	0/1:27,0:34:22.33:192,0,22	0/0:41,0:43:87.69:0,88,1297	0/0:37,0:39:40.33:0,40,874	0/0:24,0:24:42.13:0,42,649	1/1:13,20:40:55.76:1121,56,0	1/1:16,23:45:68.44:1476,68,0	1/1:35,0:38:44.15:439,44,0	0/1:14,0:37:32.18:203,0,32	1/1:33,0:43:68.36:632,68,0	0/0:19,0:20:2.33:0,2,493	1/1:14,0:13:17.96:245,18,0	1/1:15,0:20:19.57:95,20,0	0/1:14,0:38:46.11:147,0,46	1/1:45,1:70:20.65:495,21,0	0/0:20,0:20:33.06:0,33,519	0/0:26,0:31:31.98:0,32,807	0/0:34,0:35:56.67:0,57,816	0/0:30,0:31:54.11:0,54,791	1/1:20,0:47:1.77:336,2,0	0/1:10,0:30:90.04:90,0,155	0/1:5,0:17:27.04:66,0,27
chr10	101501573	.	T	TG	533.73	PASS	AB=0.934;AC=7;AF=0.125;AN=56;BaseQRankSum=10.034;DP=1019;FS=12.797;HRun=0;HaplotypeScore=222.5397;InbreedingCoeff=0.1858;MQ=54.95;MQ0=18;MQRankSum=-5.001;QD=3.36;ReadPosRankSum=-5.710;VQSLOD=1.1617;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:36,3:37:90.07:90,0,111	0/1:6,0:6:13.92:14,0,75	0/0:64,0:21:54.17:0,54,724	0/0:57,0:28:47.61:0,48,859	0/0:18,0:18:48.16:0,48,664	0/0:34,1:35:96.75:0,97,1305	0/0:30,0:30:78.18:0,78,1016	0/0:37,0:36:96.32:0,96,1342	0/0:41,0:41:99:0,114,1548	0/0:46,0:46:86.32:0,86,1744	0/0:20,0:20:57.17:0,57,752	0/0:45,0:44:66.66:0,67,1126	0/0:40,0:40:87.39:0,87,1296	1/1:22,7:29:13.68:256,14,0	0/0:38,1:39:99:0,102,1398	0/1:41,6:45:99:284,0,206	0/0:26,1:27:52.93:0,53,867	0/1:18,1:19:9.72:10,0,373	0/0:21,0:21:51.52:0,52,772	0/0:34,0:34:84.25:0,84,1147	0/0:77,0:77:99:0,195,2644	0/0:29,0:29:81.27:0,81,1126	0/0:34,0:34:99:0,99,1381	0/0:36,0:36:80.50:0,81,1070	0/0:33,0:33:93.29:0,93,1280	0/0:53,0:52:99:0,153,2059	0/0:44,0:43:99:0,108,1499	0/1:17,1:18:11.19:11,0,386
chr10	101501579	.	GCA	G	42.11	PASS	AB=0.958;AC=3;AF=0.054;AN=56;BaseQRankSum=7.438;DP=1022;FS=23.787;HRun=0;HaplotypeScore=230.3747;InbreedingCoeff=0.3799;MQ=55.61;MQ0=15;MQRankSum=-5.578;QD=0.63;ReadPosRankSum=-2.592;VQSLOD=1.0113;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,2:33:13.10:0,13,202	0/0:6,0:6:6.28:0,6,101	0/0:65,0:26:72.13:0,72,1319	0/0:65,2:34:50.01:0,50,1388	0/0:18,0:18:51.17:0,51,1004	0/0:34,1:35:64.61:0,65,1909	0/0:26,1:27:72.23:0,72,1377	0/0:42,0:41:99:0,117,2312	0/0:42,1:43:99:0,121,2351	0/0:50,1:51:99:0,133,2806	0/0:21,0:21:60.21:0,60,1193	0/0:39,0:40:58.78:0,59,1486	0/0:43,0:43:99:0,111,2080	1/1:20,1:21:1.63:70,2,0	0/0:39,0:39:99:0,102,1990	0/1:44,2:44:62.63:63,0,416	0/0:26,0:26:50.55:0,51,1192	0/0:19,1:19:12.97:0,13,636	0/0:20,0:19:57.20:0,57,1137	0/0:33,0:33:86.95:0,87,1717	0/0:78,0:78:99:0,199,4005	0/0:33,0:33:93.67:0,94,1777	0/0:34,0:34:99:0,102,2049	0/0:35,0:35:77.90:0,78,1539	0/0:33,0:33:96.17:0,96,1893	0/0:51,0:50:99:0,150,2947	0/0:44,0:43:99:0,111,2172	0/0:17,1:18:28.25:0,28,583
chr10	101501619	.	TATG	T	56.92	PASS	AB=0.966;AC=5;AF=0.089;AN=56;BaseQRankSum=6.837;DP=1151;FS=27.693;HRun=0;HaplotypeScore=207.7519;InbreedingCoeff=0.3630;MQ=55.30;MQ0=21;MQRankSum=-5.429;QD=1.09;ReadPosRankSum=-2.883;VQSLOD=1.0479;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,3:25:50.04:50,0,67	0/1:2,0:2:0:0,0,0	0/0:91,1:44:99:0,112,2391	0/0:75,0:39:99:0,103,2118	0/0:31,0:31:84.29:0,84,2021	0/0:46,0:46:99:0,135,3213	0/0:32,0:32:87.22:0,87,1951	0/0:60,0:54:99:0,129,3628	0/0:43,0:43:99:0,120,2809	0/0:74,0:74:99:0,214,5101	0/0:29,0:29:87.24:0,87,2027	0/0:46,0:46:99:0,117,2769	0/0:48,0:48:99:0,138,3262	1/1:8,2:10:3.01:55,3,0	0/0:36,0:36:99:0,102,2365	0/0:27,3:29:8.29:0,8,98	0/0:31,0:31:78.05:0,78,1863	0/1:14,0:14:53.90:54,0,130	0/0:20,0:17:46.97:0,47,1067	0/0:42,0:42:93.35:0,93,2638	0/0:88,0:88:99:0,212,5497	0/0:46,0:46:99:0,138,3290	0/0:33,0:33:69.32:0,69,2173	0/0:43,0:43:96.28:0,96,2166	0/0:40,0:40:99:0,114,2704	0/0:58,0:58:99:0,172,4129	0/0:41,0:40:99:0,105,2495	0/0:14,0:14:33.11:0,33,759
chr10	101501622	.	G	GT	788.60	PASS	AB=0.500;AC=9;AF=0.161;AN=56;BaseQRankSum=6.735;DP=1114;FS=17.586;HRun=1;HaplotypeScore=151.7442;InbreedingCoeff=0.8978;MQ=55.11;MQ0=19;MQRankSum=-5.755;QD=10.66;ReadPosRankSum=-2.810;VQSLOD=-0.0102;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,16:24:19.45:199,19,0	0/1:0,2:2:0:0,0,0	0/0:81,0:36:99:0,101,1300	0/0:69,0:35:96.77:0,97,1258	0/0:29,0:29:84.28:0,84,1173	0/0:47,0:47:99:0,135,1886	0/0:29,0:29:78.26:0,78,1089	0/0:61,2:56:99:0,153,2136	0/0:44,0:44:99:0,126,1730	0/0:74,0:74:99:0,214,2958	0/0:27,0:27:81.27:0,81,1132	0/0:42,1:43:99:0,117,1611	0/0:49,0:49:99:0,138,1872	1/1:2,8:10:3.01:34,3,0	0/0:36,0:36:99:0,99,1382	1/1:5,18:22:11.91:189,12,0	0/0:30,0:30:78.18:0,78,1087	1/1:1,12:14:37.10:513,37,0	0/0:20,0:18:48.15:0,48,656	0/0:37,0:37:99:0,108,1508	0/0:88,1:89:99:0,233,3202	0/0:46,0:46:99:0,135,1884	0/0:31,0:31:90.30:0,90,1256	0/0:37,3:40:87.29:0,87,1217	0/0:40,0:40:99:0,114,1555	0/0:60,0:60:99:0,175,2415	0/0:39,0:38:99:0,102,1427	0/0:14,0:14:33.11:0,33,460
chr10	101501640	.	T	TC	535.88	PASS	AB=0.754;AC=8;AF=0.143;AN=56;BaseQRankSum=6.959;DP=1092;FS=0.897;HRun=0;HaplotypeScore=122.0255;InbreedingCoeff=0.6129;MQ=54.43;MQ0=33;MQRankSum=-0.720;QD=8.12;ReadPosRankSum=-4.988;VQSLOD=2.3810;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,10:24:14.97:180,0,15	1/1:1,1:2:5.99:70,6,0	0/0:52,0:17:48.14:0,48,645	0/0:55,0:21:56.55:0,57,748	0/0:37,0:37:99:0,108,1474	0/0:42,0:42:99:0,116,1617	0/0:30,0:27:69.23:0,69,964	0/0:56,0:43:99:0,120,1662	0/0:44,0:44:99:0,129,1804	0/0:69,0:68:99:0,202,2810	0/0:28,0:28:81.27:0,81,1133	0/0:46,0:46:99:0,126,1756	0/0:56,0:56:99:0,165,2302	1/1:4,5:9:5.85:96,6,0	0/0:43,0:43:99:0,117,1634	1/1:6,12:17:8.12:143,8,0	0/0:30,0:30:72.24:0,72,1007	0/1:8,3:11:99:183,0,121	0/0:19,0:13:39.13:0,39,545	0/0:41,0:41:99:0,123,1717	0/0:93,0:91:99:0,235,3236	0/0:50,0:50:99:0,147,2056	0/0:35,0:35:99:0,102,1373	0/0:38,0:38:78.26:0,78,1091	0/0:42,0:42:99:0,114,1577	0/0:69,0:67:99:0,202,2763	0/0:38,0:37:99:0,114,1557	0/0:11,0:11:27.06:0,27,358
chr10	101501982	.	ATATGTGTG	A	961.90	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=6.779;DP=1300;FS=2.039;HRun=0;HaplotypeScore=377.9750;InbreedingCoeff=0.7763;MQ=56.95;MQ0=32;MQRankSum=-6.171;QD=6.68;ReadPosRankSum=-0.999;VQSLOD=1.1888;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:66.02:0,66,2455	0/0:14,0:14:39.13:0,39,1578	0/0:44,0:13:35.94:0,36,1047	0/0:50,0:19:35.35:0,35,1100	0/0:40,0:40:99:0,105,3837	0/0:35,0:34:84.29:0,84,3342	0/0:28,0:28:75.26:0,75,2625	0/0:55,0:53:99:0,111,3927	0/0:64,0:64:99:0,163,6150	0/0:90,0:90:99:0,235,9016	0/0:26,0:26:69.22:0,69,2621	1/1:9,43:52:6.37:236,6,0	1/1:13,48:61:31.80:837,32,0	0/0:47,0:47:99:0,117,4404	0/0:88,0:88:99:0,208,7285	0/0:77,0:77:99:0,178,6435	0/0:24,0:24:49.36:0,49,1777	0/1:31,0:31:3.36:3,0,2362	0/0:19,0:17:30.10:0,30,1247	0/0:44,0:44:99:0,105,3649	0/0:103,0:103:99:0,274,10318	0/0:38,0:38:75.26:0,75,2755	0/0:36,0:36:93.30:0,93,3500	0/0:44,0:44:87.23:0,87,3171	0/0:36,0:36:99:0,99,3971	0/0:59,0:59:99:0,151,5692	0/0:41,0:41:99:0,108,3709	0/0:12,0:12:11.71:0,12,318
chr10	101503103	.	G	GT	1458.01	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.701;DP=736;FS=1.971;HRun=4;HaplotypeScore=78.0117;InbreedingCoeff=0.9999;MQ=72.04;MQ0=0;MQRankSum=-2.119;QD=29.16;ReadPosRankSum=0.666;VQSLOD=3.6256;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.21:0,81,907	0/0:15,0:15:39.11:0,39,442	0/0:23,0:23:57.05:0,57,628	0/0:17,0:16:39.06:0,39,418	0/0:46,0:46:99:0,138,1554	0/0:22,0:22:54.15:0,54,612	0/0:17,0:17:45.13:0,45,510	0/0:37,0:37:96.24:0,96,1062	0/0:26,0:26:78.22:0,78,885	0/0:46,0:46:99:0,114,1293	0/0:39,0:39:99:0,99,1123	1/1:1,22:24:63.03:783,63,0	1/1:2,24:26:63.20:797,63,0	0/0:25,0:25:75.21:0,75,850	0/0:29,0:29:87.25:0,87,987	0/0:19,0:19:57.15:0,57,637	0/0:18,0:18:51.14:0,51,578	0/0:15,0:15:45.13:0,45,510	0/0:24,0:24:69.20:0,69,782	0/0:32,0:32:87.25:0,87,987	0/0:21,0:21:54.15:0,54,612	0/0:28,0:28:75.20:0,75,841	0/0:20,0:20:57.16:0,57,646	0/0:21,0:21:57.16:0,57,647	0/0:32,0:31:84.24:0,84,953	0/0:31,0:31:87.25:0,87,986	0/0:37,0:36:99:0,99,1121	0/0:17,0:17:51.15:0,51,578
chr10	101503287	.	C	CAAGGGGAAAGTCTGCT	12710.77	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.920;DP=804;FS=0.000;HRun=0;HaplotypeScore=339.1662;InbreedingCoeff=0.9997;MQ=89.58;MQ0=0;MQRankSum=-13.036;QD=192.59;ReadPosRankSum=1.727;VQSLOD=4.4772;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.21:0,72,3006	0/0:15,0:15:45.12:0,45,1771	0/0:36,0:36:93.27:0,93,3546	0/0:35,0:35:95.84:0,96,3272	0/0:27,0:27:63.22:0,63,2730	0/0:36,0:36:96.32:0,96,4102	0/0:24,0:24:69.23:0,69,2907	0/0:45,0:44:99:0,129,4935	0/0:30,0:30:84.29:0,84,3825	0/0:34,0:34:99:0,99,4228	0/0:19,0:19:57.17:0,57,2344	1/1:12,19:33:96.33:6606,96,0	1/1:18,11:33:90.31:6105,90,0	0/0:28,0:28:78.25:0,78,3226	0/0:39,0:39:99:0,108,4648	0/0:36,0:36:99:0,108,4669	0/0:33,0:33:96.29:0,96,3760	0/0:16,0:16:31.47:0,31,1511	0/0:25,0:25:69.24:0,69,3111	0/0:28,0:28:81.22:0,81,3098	0/0:33,0:33:99:0,99,4313	0/0:24,0:24:69.21:0,69,2867	0/0:14,0:14:42.14:0,42,1878	0/0:30,0:30:87.30:0,87,3624	0/0:24,0:24:66.22:0,66,2782	0/0:38,0:38:99:0,105,4396	0/0:28,0:28:84.26:0,84,3484	0/0:13,0:13:39.13:0,39,1638
chr10	101504286	.	T	TA	4741.85	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-14.694;DP=529;FS=8.187;HRun=9;HaplotypeScore=58.2932;InbreedingCoeff=0.9712;MQ=75.21;MQ0=0;MQRankSum=-1.568;QD=25.77;ReadPosRankSum=-2.648;VQSLOD=4.3802;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:17.97:0,18,152	0/0:4,0:4:6:0,6,52	0/0:11,0:11:23.90:0,24,193	0/0:14,0:14:29.77:0,30,244	0/0:28,0:28:71.96:0,72,625	0/0:27,0:27:74.98:0,75,651	0/0:20,0:20:56.97:0,57,491	1/1:5,28:33:84.20:907,84,0	0/0:19,0:19:47.99:0,48,417	0/0:21,0:21:56.98:0,57,494	0/0:17,0:17:41.98:0,42,365	0/0:10,0:10:29.99:0,30,260	0/0:24,0:24:71.99:0,72,625	0/0:20,0:20:53.99:0,54,469	1/1:6,15:21:19.07:439,19,0	0/0:24,0:24:62.97:0,63,545	0/0:16,0:16:44.97:0,45,385	0/0:4,0:4:11.97:0,12,99	1/1:2,23:25:69.13:734,69,0	1/1:5,22:27:66.18:730,66,0	1/1:2,8:10:18.05:199,18,0	0/0:18,0:18:44.98:0,45,391	0/0:14,0:14:35.98:0,36,313	0/0:18,0:18:47.98:0,48,417	0/0:28,0:28:74.98:0,75,651	1/1:5,21:26:17.08:645,17,0	1/1:3,28:30:72.19:790,72,0	1/1:2,9:11:27.07:299,27,0
chr10	101504415	.	A	AT	6557.26	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-11.967;DP=418;FS=0.390;HRun=8;HaplotypeScore=39.3298;InbreedingCoeff=0.9871;MQ=72.50;MQ0=0;MQRankSum=-2.101;QD=29.40;ReadPosRankSum=-0.924;VQSLOD=4.3680;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,28:32:87.15:986,87,0	1/1:0,4:4:12:125,12,0	0/0:10,0:10:23.93:0,24,199	0/0:9,0:9:20.84:0,21,176	0/0:16,0:16:38.99:0,39,352	0/0:12,0:12:33.02:0,33,302	0/0:15,0:15:42.01:0,42,380	1/1:3,25:28:75.18:835,75,0	0/0:21,0:21:60.02:0,60,545	0/0:16,0:16:45.02:0,45,412	0/0:9,0:9:27.01:0,27,247	0/0:11,0:11:24:0,24,220	0/0:18,0:18:51.01:0,51,462	1/1:1,12:13:36.11:415,36,0	1/1:1,15:16:36.11:416,36,0	1/1:0,12:13:38.95:430,39,0	0/0:15,0:15:33.01:0,33,302	1/1:0,10:10:23.98:277,24,0	1/1:3,22:25:66.16:740,66,0	1/1:3,16:19:48.14:554,48,0	1/1:0,11:11:30.09:346,30,0	0/0:6,0:6:18.01:0,18,165	0/0:11,0:11:33.02:0,33,302	0/0:11,0:11:30.02:0,30,275	0/0:15,0:15:36.02:0,36,330	1/1:3,22:25:17.27:707,17,0	1/1:2,20:22:51.15:589,51,0	1/1:1,4:5:12.04:138,12,0
chr10	101504568	.	CATCT	C	314.76	PASS	AB=0.929;AC=8;AF=0.174;AN=46;BaseQRankSum=-0.624;DP=309;FS=2.164;HRun=0;HaplotypeScore=84.1953;InbreedingCoeff=0.4025;MQ=53.96;MQ0=5;MQRankSum=-0.712;QD=5.62;ReadPosRankSum=-0.082;VQSLOD=1.6215;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:6.02:90,6,0	./.	./.	./.	0/0:10,0:10:12.03:0,12,189	0/0:9,0:9:21.07:0,21,457	0/0:8,0:7:3.47:0,3,25	0/0:20,0:18:5.81:0,6,32	1/1:4,8:12:3.01:46,3,0	0/1:5,1:6:34.11:34,0,150	0/0:9,0:8:9.02:0,9,165	0/0:8,0:8:8.52:0,9,111	0/0:2,0:10:15.05:0,15,285	./.	0/0:10,0:10:18.02:0,18,222	1/1:11,0:12:7.51:117,8,0	0/0:18,0:18:36.11:0,36,783	0/0:14,0:14:2.96:0,3,19	0/0:9,0:8:6.01:0,6,64	0/0:13,0:12:15:0,15,179	0/0:21,0:21:20.07:0,20,210	./.	0/0:7,0:7:9.03:0,9,202	0/0:13,0:13:18.05:0,18,344	0/1:17,0:17:99:151,0,452	0/0:12,0:12:14.76:0,15,128	0/0:11,0:11:17.97:0,18,168	0/0:9,0:9:18.02:0,18,191
chr10	101504648	.	ATG	A	378.22	PASS	AB=1.000;AC=14;AF=0.333;AN=42;BaseQRankSum=2.932;DP=119;FS=8.440;HRun=0;HaplotypeScore=31.3532;InbreedingCoeff=0.3899;MQ=58.61;MQ0=4;MQRankSum=1.192;QD=7.00;ReadPosRankSum=0.179;VQSLOD=1.2587;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:2.99:0,3,24	./.	./.	0/0:13,0:3:3.47:0,3,26	0/0:4,0:4:11.98:0,12,97	0/0:5,0:5:14.96:0,15,119	0/0:4,0:4:11.98:0,12,97	1/1:3,10:12:5.08:188,5,0	./.	0/0:1,0:1:3:0,3,27	0/0:1,0:1:2.99:0,3,24	0/0:2,0:2:2.86:0,3,23	0/0:2,0:2:2.99:0,3,23	./.	1/1:6,0:6:14.94:114,15,0	0/0:4,0:4:0.47:0,0,1	0/1:19,0:18:44.70:45,0,229	0/1:7,0:7:13.39:15,0,13	1/1:1,0:1:2.99:23,3,0	./.	1/1:3,0:3:2.98:22,3,0	./.	0/0:3,0:3:8.98:0,9,72	0/0:1,0:1:2.99:0,3,23	0/0:8,0:8:23.96:0,24,196	1/1:3,0:3:8.92:63,9,0	1/1:2,0:2:5.97:45,6,0	./.
chr10	101505439	.	GA	G	7509.85	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=19.305;DP=733;FS=7.951;HRun=1;HaplotypeScore=95.7220;InbreedingCoeff=0.9970;MQ=85.59;MQ0=0;MQRankSum=-2.460;QD=39.73;ReadPosRankSum=3.720;VQSLOD=5.0251;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:44:99:1637,117,0	1/1:0,6:6:15.05:210,15,0	0/0:23,0:23:69.23:0,69,1081	0/0:24,1:25:30.92:0,31,1027	0/0:17,0:17:51.12:0,51,760	0/0:21,0:21:63.21:0,63,1006	0/0:36,0:36:99:0,108,1727	0/0:29,0:29:87.29:0,87,1351	0/0:21,0:21:63.21:0,63,1007	0/0:32,0:32:96.33:0,96,1535	0/0:15,0:15:45.14:0,45,696	1/1:0,28:28:78.26:1091,78,0	1/1:0,36:36:99:1511,108,0	1/1:0,37:37:99:1468,105,0	0/0:40,0:40:99:0,120,1908	1/1:0,25:25:75.25:1049,75,0	0/0:17,0:17:51.17:0,51,815	1/1:0,13:13:39.13:545,39,0	0/0:31,0:31:93.27:0,93,1429	0/0:22,0:22:63.21:0,63,998	0/0:36,0:36:99:0,108,1675	0/0:19,0:19:57.18:0,57,888	0/0:21,0:21:63.21:0,63,1006	0/0:36,0:36:99:0,108,1702	0/0:25,0:25:72.20:0,72,1077	0/0:36,0:36:99:0,105,1625	0/0:29,0:29:87.30:0,87,1385	0/0:13,0:13:39.11:0,39,598
chr10	101505826	.	AACAC	A	2965.39	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.624;DP=714;FS=4.516;HRun=0;HaplotypeScore=140.0884;InbreedingCoeff=0.8600;MQ=71.04;MQ0=9;MQRankSum=5.461;QD=24.51;ReadPosRankSum=3.816;VQSLOD=3.5930;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,43:62:70.65:1304,71,0	1/1:2,10:13:27.09:439,27,0	0/0:52,0:30:26.84:0,27,465	0/0:52,0:37:41.99:0,42,905	0/0:29,0:33:68.71:0,69,1540	0/0:24,0:25:53.90:0,54,1197	0/0:27,1:30:7.83:0,8,1087	0/0:34,0:32:32.95:0,33,671	0/0:25,0:25:48.13:0,48,1046	0/0:21,0:23:46.70:0,47,956	0/0:12,0:14:29.81:0,30,550	0/0:19,0:19:6.02:0,6,99	0/0:14,0:12:9.03:0,9,135	1/1:5,15:22:48.14:718,48,0	0/0:17,0:24:20.99:0,21,236	1/1:5,18:23:42.14:662,42,0	0/0:35,1:38:42.10:0,42,1955	0/0:9,0:9:18.06:0,18,318	0/0:18,0:18:29.89:0,30,525	0/0:12,0:15:6.49:0,6,121	0/0:23,0:23:12.28:0,12,204	0/0:20,0:22:53.62:0,54,1067	0/0:17,0:18:38.87:0,39,886	0/0:32,0:36:86.21:0,86,1767	0/0:21,0:23:39.70:0,40,1305	0/0:22,0:22:53.84:0,54,918	0/0:16,0:18:21.02:0,21,350	0/0:3,0:3:3:0,3,25
chr10	101506845	.	GT	G	1520.66	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.270;DP=520;FS=5.866;HRun=8;HaplotypeScore=51.6443;InbreedingCoeff=0.9483;MQ=83.63;MQ0=0;MQRankSum=-4.060;QD=22.36;ReadPosRankSum=0.762;VQSLOD=4.1369;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:25:60.09:579,60,0	1/1:1,7:8:21.03:203,21,0	0/0:13,0:13:33.03:0,33,355	0/0:19,0:19:38.84:0,39,438	0/0:26,0:26:69.17:0,69,817	0/0:32,0:32:84.26:0,84,1015	0/0:14,0:14:42.10:0,42,475	0/0:21,0:21:45.14:0,45,542	0/0:25,0:25:66.19:0,66,788	0/0:15,0:15:45.14:0,45,542	0/0:20,0:20:60.18:0,60,724	0/0:22,0:22:63.19:0,63,760	0/0:20,0:20:60.17:0,60,713	1/1:2,10:12:30.05:290,30,0	0/0:22,0:22:66.20:0,66,797	1/1:1,22:23:63:608,63,0	0/0:24,0:24:69.17:0,69,816	0/0:13,0:13:36.09:0,36,422	0/0:24,0:24:62.39:0,62,718	0/0:28,0:28:69.19:0,69,813	0/0:12,0:13:35.96:0,36,402	0/0:3,0:3:3.01:0,3,36	0/0:8,0:8:21.06:0,21,254	0/0:7,0:7:18.04:0,18,207	0/0:20,0:20:60.18:0,60,724	0/0:29,0:29:84.26:0,84,1015	0/0:23,0:23:66.20:0,66,797	0/0:11,0:11:30.09:0,30,362
chr10	101507125	.	ATG	A	1755.83	PASS	AB=0.831;AC=38;AF=0.826;AN=46;BaseQRankSum=2.188;DP=495;FS=0.000;HRun=0;HaplotypeScore=89.8677;InbreedingCoeff=0.2912;MQ=60.70;MQ0=7;MQRankSum=-0.256;QD=4.90;ReadPosRankSum=0.413;VQSLOD=2.2275;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:18,4:22:3.01:32,3,0	0/1:14,0:22:4.35:52,0,4	1/1:15,0:20:1.72:12,2,0	./.	1/1:12,2:14:6.02:65,6,0	0/0:21,0:21:9.02:0,9,100	0/0:20,0:20:18.05:0,18,241	1/1:5,0:13:14.20:70,14,0	1/1:9,0:17:17.04:84,17,0	1/1:10,6:15:18.05:194,18,0	1/1:6,0:14:14.08:70,14,0	1/1:12,0:22:22:114,22,0	1/1:17,12:30:35.92:370,36,0	0/1:14,0:15:0:0,0,0	1/1:8,0:8:2.84:14,3,0	1/1:24,3:27:12.03:127,12,0	0/1:8,1:8:19.85:26,0,20	1/1:12,0:11:3.01:32,3,0	1/1:17,4:21:7.34:123,7,0	1/1:11,4:15:9.02:97,9,0	0/1:14,6:20:6.89:144,0,7	1/1:15,2:17:6.02:65,6,0	1/1:7,5:12:15.04:158,15,0	1/1:6,4:10:3:32,3,0
chr10	101507416	.	ATG	A	2624.79	PASS	AB=0.890;AC=20;AF=0.357;AN=56;BaseQRankSum=11.463;DP=1230;FS=2.124;HRun=0;HaplotypeScore=468.9157;InbreedingCoeff=-0.0913;MQ=45.77;MQ0=14;MQRankSum=-6.976;QD=3.81;ReadPosRankSum=2.152;VQSLOD=0.5858;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:33:36.51:45,0,37	0/1:16,0:19:30.81:102,0,31	0/0:46,0:24:30.58:0,31,461	0/0:64,0:29:38.88:0,39,485	0/1:71,0:71:25.89:26,0,944	0/0:27,0:27:39.96:0,40,639	0/1:33,2:35:16.87:17,0,676	0/0:53,0:49:40.17:0,40,1067	0/0:37,0:37:70.24:0,70,1012	0/0:66,0:67:0.49:0,0,1480	0/1:38,0:38:1.27:1,0,548	1/1:7,42:49:78.07:913,78,0	1/1:13,38:51:75.33:925,75,0	1/1:14,0:34:9.43:176,9,0	0/0:28,0:55:92.10:0,92,773	0/1:11,0:39:69.49:144,0,69	0/1:44,1:45:9.63:10,0,878	0/1:11,0:25:18.30:18,0,55	0/1:30,2:27:20.90:21,0,566	0/1:67,0:66:99:123,0,1021	0/0:54,2:56:36.09:0,36,1448	0/1:57,2:59:99:154,0,747	0/1:49,1:50:56.91:57,0,548	0/0:38,0:38:73.10:0,73,1252	0/0:47,0:47:13.67:0,14,979	0/0:49,0:49:72.94:0,73,1286	0/1:28,3:32:54.68:55,0,776	0/1:10,0:10:9.90:10,0,220
chr10	101507524	.	A	ATGTGTTTG	18892.97	PASS	AB=0.863;AC=25;AF=0.446;AN=56;BaseQRankSum=22.944;DP=1142;FS=111.899;HRun=0;HaplotypeScore=530.0399;InbreedingCoeff=-0.8064;MQ=41.41;MQ0=4;MQRankSum=-10.125;QD=17.76;ReadPosRankSum=0.330;VQSLOD=0.3729;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,2:20:40.69:41,0,686	0/1:18,3:21:99:744,0,430	0/0:34,0:31:79.14:0,79,1824	0/0:20,0:18:48.16:0,48,1170	0/1:29,14:52:99:1390,0,875	0/1:21,5:28:99:353,0,1088	0/1:34,0:34:99:265,0,1259	0/1:63,0:54:99:1085,0,1704	0/1:37,11:50:99:1342,0,1373	0/1:60,13:80:99:1640,0,2438	0/1:34,5:46:99:563,0,1240	0/1:39,3:41:99:321,0,1923	0/1:49,1:50:99:485,0,2240	0/1:34,8:42:99:1143,0,1440	0/1:42,6:47:99:1314,0,2039	0/1:30,9:39:99:1381,0,1268	0/0:24,0:23:57.17:0,57,1340	0/1:10,1:11:99:104,0,511	0/1:32,0:31:99:154,0,1617	0/1:53,13:72:99:1741,0,1959	0/1:37,0:37:64.15:64,0,1628	0/1:36,6:49:99:618,0,1395	0/1:30,10:43:99:863,0,1234	0/1:25,4:33:99:169,0,782	0/1:45,12:60:99:1366,0,1858	0/1:48,2:49:99:542,0,2454	0/1:25,12:45:99:1108,0,1208	0/1:10,0:10:96.51:97,0,365
chr10	101507720	.	A	ATG	14282.63	PASS	AB=0.667;AC=25;AF=0.446;AN=56;BaseQRankSum=0.914;DP=910;FS=12.682;HRun=0;HaplotypeScore=213.5192;InbreedingCoeff=0.9235;MQ=53.18;MQ0=6;MQRankSum=-1.810;QD=34.33;ReadPosRankSum=0.509;VQSLOD=4.3323;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,25:40:84.15:1345,84,0	1/1:5,5:9:18.06:283,18,0	0/0:33,0:32:69.03:0,69,810	0/0:26,0:25:47.96:0,48,548	0/0:34,0:34:60.19:0,60,740	0/0:21,0:21:45.13:0,45,544	0/0:18,0:18:42.12:0,42,504	1/1:12,24:35:81.21:1256,81,0	0/0:48,0:47:99:0,108,1335	0/0:47,0:47:77.99:0,78,966	0/0:28,0:28:57.18:0,57,713	0/0:9,0:20:10.22:0,10,135	0/0:13,0:29:45.53:0,46,213	1/1:6,31:37:90.31:1479,90,0	1/1:6,36:43:99:1809,111,0	1/1:12,28:39:87.30:1418,87,0	0/0:41,0:41:99:0,105,1313	0/1:8,8:16:12.10:387,0,12	1/1:10,14:24:45.15:742,45,0	1/1:16,25:41:78.26:1259,78,0	1/1:14,39:51:99:1925,117,0	0/0:40,0:40:72.22:0,72,887	0/0:29,0:28:51.16:0,51,629	0/0:51,0:51:99:0,106,1287	0/0:26,0:25:63.20:0,63,779	1/1:12,15:26:48.16:787,48,0	1/1:10,31:41:46.78:1296,47,0	1/1:0,6:6:18.06:297,18,0
chr10	101507739	.	G	GC	1002.75	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.720;DP=771;FS=30.527;HRun=4;HaplotypeScore=160.5857;InbreedingCoeff=0.9876;MQ=63.64;MQ0=5;MQRankSum=-5.920;QD=31.34;ReadPosRankSum=0.093;VQSLOD=0.7665;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,1110	0/0:8,0:7:18.05:0,18,202	0/0:30,0:30:75.09:0,75,810	0/0:23,0:23:57.14:0,57,626	0/0:25,0:25:57.13:0,57,626	0/0:22,0:22:63.15:0,63,693	0/0:18,0:18:48.14:0,48,543	0/0:32,0:31:74.75:0,75,829	0/0:40,0:40:99:0,99,1122	0/0:30,0:30:63.13:0,63,700	0/0:23,0:23:54.15:0,54,612	1/1:2,11:13:33.11:450,33,0	1/1:1,18:19:51.13:675,51,0	0/0:37,0:37:96.27:0,96,1088	0/0:43,0:42:99:0,102,1156	0/0:32,0:31:81.23:0,81,913	0/0:42,0:42:99:0,117,1326	0/0:17,0:16:45.13:0,45,509	0/0:16,0:16:39.09:0,39,432	0/0:33,0:33:69.15:0,69,767	0/0:48,0:46:99:0,126,1419	0/0:32,0:32:75.21:0,75,849	0/0:19,0:18:42.12:0,42,475	0/0:44,0:44:99:0,123,1395	0/0:23,0:22:50.98:0,51,558	0/0:20,0:19:45.11:0,45,500	0/0:40,0:39:99:0,105,1190	0/0:5,0:5:15.04:0,15,170
chr10	101507959	.	TAA	T	1816.95	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.873;DP=629;FS=0.455;HRun=13;HaplotypeScore=83.0490;InbreedingCoeff=0.9897;MQ=65.21;MQ0=0;MQRankSum=0.852;QD=20.65;ReadPosRankSum=5.051;VQSLOD=3.3087;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:31:65.78:672,66,0	1/1:0,7:7:21.03:204,21,0	0/0:20,0:17:31.59:0,32,289	0/0:12,0:14:12.27:0,12,96	0/0:25,0:27:60.35:0,60,726	0/0:24,0:24:54.17:0,54,761	0/0:17,0:18:41.61:0,42,552	0/0:31,0:33:68.67:0,69,891	0/0:17,0:17:45.12:0,45,608	0/0:33,0:34:86.71:0,87,1138	0/0:22,1:23:30.80:0,31,675	0/0:18,0:19:50.61:0,51,623	0/0:12,0:13:32.59:0,33,426	1/1:5,20:26:59.80:565,60,0	0/0:19,0:19:54.18:0,54,779	1/1:1,13:14:33.05:320,33,0	0/0:23,0:22:53.80:0,54,677	1/1:2,8:10:24.02:231,24,0	0/0:13,0:16:21.06:0,21,275	0/0:32,0:35:53.59:0,54,1005	0/0:19,0:19:48.14:0,48,670	0/0:31,0:32:74.71:0,75,1008	0/0:27,1:30:43.19:0,43,798	0/0:26,0:27:71.70:0,72,971	0/0:16,0:17:44.40:0,44,533	0/0:26,0:26:60.09:0,60,737	0/0:35,0:37:95.64:0,96,1262	0/0:15,1:17:21.55:0,22,613
chr10	101508747	.	C	CT	1399.69	PASS	AB=0.735;AC=11;AF=0.196;AN=56;BaseQRankSum=-8.203;DP=639;FS=5.398;HRun=12;HaplotypeScore=82.7270;InbreedingCoeff=0.1675;MQ=69.80;MQ0=12;MQRankSum=-1.406;QD=8.33;ReadPosRankSum=-2.741;VQSLOD=2.2805;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:20:28.52:0,29,83	0/0:1,0:10:16.29:0,16,47	0/0:68,0:26:2.48:0,2,137	0/0:57,0:13:0.57:0,1,28	0/0:26,0:26:34.17:0,34,370	0/0:23,1:24:33.44:0,33,408	0/1:11,1:13:0.33:0,0,150	0/1:15,13:28:62.62:248,0,63	0/0:10,0:11:31.81:0,32,219	0/0:19,1:23:11.86:0,12,226	0/0:19,1:26:19.25:0,19,250	0/0:3,0:20:32.59:0,33,96	0/0:2,0:21:35.86:0,36,104	0/0:3,0:19:25.38:0,25,87	0/1:8,8:16:63.61:92,0,64	0/0:1,0:16:26.47:0,26,76	0/0:18,0:19:34.73:0,35,243	0/0:8,0:31:39.70:0,40,116	0/1:9,2:13:6.67:100,0,7	1/1:7,19:27:26:413,26,0	0/1:6,2:9:13.74:69,0,14	0/0:9,0:10:19.92:0,20,137	0/0:17,0:19:36.83:0,37,253	0/0:17,0:21:36.42:0,36,250	0/0:25,0:29:64.82:0,65,450	0/1:10,17:27:46.71:366,0,47	0/1:10,16:26:14.60:228,0,15	1/1:7,0:7:3:29,3,0
chr10	101509096	.	TA	T	4536.82	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.971;DP=567;FS=5.386;HRun=7;HaplotypeScore=55.1854;InbreedingCoeff=0.9961;MQ=69.09;MQ0=0;MQRankSum=-0.820;QD=26.69;ReadPosRankSum=-0.998;VQSLOD=5.1160;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:45.11:0,45,538	0/0:13,0:13:36.12:0,36,453	0/0:6,0:6:14.90:0,15,155	0/0:8,0:8:21.06:0,21,236	0/0:29,0:29:84.26:0,84,1044	0/0:22,0:22:63.20:0,63,791	0/0:11,0:11:33.11:0,33,415	1/1:5,19:24:57.09:572,57,0	0/0:16,0:16:42.12:0,42,514	0/0:23,0:23:63.20:0,63,791	0/0:31,0:31:87.28:0,87,1094	0/0:21,0:21:63.18:0,63,770	0/0:25,0:25:66.20:0,66,817	0/0:18,0:18:54.17:0,54,679	1/1:2,13:15:39.09:398,39,0	0/0:17,0:17:48.14:0,48,589	0/0:23,0:23:69.21:0,69,855	0/0:25,0:25:75.19:0,75,913	1/1:0,17:17:51.12:520,51,0	1/1:3,37:40:99:1102,108,0	1/1:0,9:9:24.05:245,24,0	0/0:17,0:17:39.21:0,39,512	0/0:26,0:26:60.19:0,60,755	0/0:15,0:15:45.13:0,45,551	0/0:33,0:33:96.31:0,96,1208	1/1:4,22:26:31.40:629,31,0	1/1:0,19:19:57.13:581,57,0	1/1:0,20:20:50.43:489,50,0
chr10	101514052	.	A	AACACAC	641.52	PASS	AB=1.000;AC=10;AF=0.192;AN=52;BaseQRankSum=2.778;DP=477;FS=11.087;HRun=0;HaplotypeScore=111.2674;InbreedingCoeff=0.5450;MQ=61.70;MQ0=8;MQRankSum=-2.785;QD=6.17;ReadPosRankSum=-1.662;VQSLOD=1.3339;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,13:33:5.90:180,6,0	1/1:9,0:8:9.03:216,9,0	./.	./.	0/0:20,0:21:24.08:0,24,467	0/0:15,0:15:24.08:0,24,429	0/0:23,0:22:14.93:0,15,231	0/0:20,0:20:11.98:0,12,150	0/0:11,0:12:15.05:0,15,283	0/0:19,0:18:23.85:0,24,475	0/0:14,0:14:24.08:0,24,445	0/0:8,0:16:11.07:0,11,132	0/1:7,0:11:39.64:40,0,114	1/1:15,0:15:3.48:35,3,0	0/0:17,0:17:9.03:0,9,166	1/1:18,0:17:15.03:256,15,0	0/0:19,0:19:22.32:0,22,379	0/1:17,0:17:51.92:60,0,52	0/0:16,0:15:24.07:0,24,420	0/0:15,0:15:6.02:0,6,120	0/0:14,0:12:16.59:0,17,254	0/0:11,0:11:6.02:0,6,122	0/0:8,0:10:3.01:0,3,61	0/0:26,0:26:27.09:0,27,496	0/0:8,0:9:12.03:0,12,195	0/0:17,0:19:29.38:0,29,555	0/0:11,0:11:24.08:0,24,420	0/0:12,0:12:21.96:0,22,408
chr10	101514091	.	GGAGAGAGAGAGAGAGA	G	316.34	PASS	AB=0.772;AC=3;AF=0.063;AN=48;BaseQRankSum=3.067;DP=464;FS=15.508;HRun=0;HaplotypeScore=181.7935;InbreedingCoeff=0.1561;MQ=44.05;MQ0=16;MQRankSum=-3.369;QD=6.33;ReadPosRankSum=1.405;VQSLOD=1.9507;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:17.71:0,18,562	0/0:7,0:7:12.03:0,12,239	./.	./.	0/0:22,0:23:6.02:0,6,193	0/0:18,0:18:15.03:0,15,510	0/0:25,0:23:2.36:0,2,5	0/0:24,0:21:20.61:0,21,319	0/0:17,0:17:27.98:0,28,1354	0/0:22,0:21:40.38:0,40,1620	0/0:15,0:15:18.06:0,18,734	0/1:16,0:17:19.93:66,0,20	0/1:7,1:14:17.59:189,0,18	./.	0/0:14,0:15:12.92:0,13,658	0/0:11,0:12:13.27:0,13,210	0/0:31,0:30:50.85:0,51,1990	0/1:12,6:18:51.54:158,0,52	0/0:24,0:24:27.88:0,28,876	./.	0/0:18,0:14:12.04:0,12,552	0/0:6,0:7:12.04:0,12,568	0/0:8,0:8:0.47:0,0,1	0/0:31,0:31:30.10:0,30,2109	0/0:13,0:11:0.47:0,0,1	0/0:24,0:22:33.11:0,33,1327	0/0:14,0:14:19.31:0,19,1103	0/0:14,0:12:18.06:0,18,765
chr10	101515578	.	A	AGTGTGT	2440.69	PASS	AB=0.990;AC=30;AF=0.577;AN=52;BaseQRankSum=0.052;DP=630;FS=4.996;HRun=0;HaplotypeScore=148.6905;InbreedingCoeff=0.5199;MQ=66.75;MQ0=10;MQRankSum=-5.090;QD=6.56;ReadPosRankSum=-2.004;VQSLOD=2.2668;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,7:31:0.47:0,0,1	1/1:2,5:9:12.92:399,13,0	./.	./.	0/0:20,0:20:19.50:0,20,220	0/0:22,0:27:19.26:0,19,388	0/1:22,0:24:35.55:36,0,132	1/1:33,0:31:8.99:94,9,0	0/1:16,0:17:12.91:13,0,119	0/1:19,0:19:28.76:29,0,231	0/0:12,0:12:9.01:0,9,131	1/1:20,0:20:11.95:118,12,0	1/1:17,0:16:9.84:50,10,0	1/1:19,0:19:25.20:292,25,0	1/1:23,2:24:21.67:389,22,0	1/1:9,10:24:2.61:96,3,0	0/0:22,0:22:17.18:0,17,331	0/0:6,0:12:3.01:0,3,42	1/1:18,0:18:9.80:142,10,0	1/1:9,10:21:5.97:110,6,0	1/1:45,0:45:7.95:98,8,0	0/0:10,0:11:18:0,18,291	0/0:23,0:23:11.98:0,12,137	0/0:32,0:36:54.05:0,54,849	0/1:18,0:18:6.56:7,0,151	1/1:35,0:35:39.10:456,39,0	1/1:13,5:23:11.72:195,12,0	1/1:1,4:5:4.57:101,5,0
chr10	101517169	.	G	GATAT	5382.44	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-4.985;DP=334;FS=3.045;HRun=0;HaplotypeScore=53.3755;InbreedingCoeff=0.8372;MQ=71.43;MQ0=0;MQRankSum=-1.170;QD=35.18;ReadPosRankSum=-2.440;VQSLOD=4.1973;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:12:26.56:547,27,0	1/1:1,5:6:15.05:373,15,0	0/0:8,0:6:0.47:0,0,1	0/1:7,0:6:4.97:18,0,5	0/0:18,0:19:48.16:0,48,770	0/0:19,0:19:48.15:0,48,785	0/0:9,0:9:15.05:0,15,253	1/1:15,15:36:70.60:1264,71,0	0/0:9,0:10:18.05:0,18,279	0/0:13,0:17:39.06:0,39,602	0/0:24,0:25:66.18:0,66,1011	0/0:11,0:12:21.07:0,21,352	0/0:13,0:13:30.10:0,30,506	1/1:6,2:8:3.01:56,3,0	1/1:3,4:7:12.04:299,12,0	1/1:3,4:8:11.78:236,12,0	0/0:21,0:22:54.17:0,54,863	1/1:3,0:10:12.04:208,12,0	1/1:6,7:14:26.83:593,27,0	1/1:4,2:7:6.02:149,6,0	1/1:2,4:7:14.79:311,15,0	0/0:4,0:4:6.02:0,6,101	0/0:7,0:7:18.06:0,18,304	0/0:3,0:3:9.03:0,9,152	0/0:13,0:13:33.09:0,33,509	1/1:2,5:7:18.06:411,18,0	1/1:2,6:9:21.07:520,21,0	1/1:4,7:15:20.39:396,20,0
chr10	101517684	.	T	TACACACACAC	708.25	PASS	AB=0.741;AC=10;AF=0.185;AN=54;BaseQRankSum=7.338;DP=945;FS=3.369;HRun=0;HaplotypeScore=275.2308;InbreedingCoeff=0.5975;MQ=54.09;MQ0=12;MQRankSum=-2.015;QD=3.69;ReadPosRankSum=-0.710;VQSLOD=1.9486;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,8:28:1.55:0,2,4	1/1:15,0:15:12.04:310,12,0	./.	0/0:40,0:20:12.03:0,12,190	0/0:25,0:29:48.08:0,48,1120	0/0:10,0:33:36.06:0,36,351	0/0:24,0:39:35.95:0,36,385	0/0:40,0:38:31.51:0,32,511	0/0:29,0:29:57.18:0,57,1470	0/0:39,0:39:29.92:0,30,1036	0/0:33,0:34:63.19:0,63,1697	0/1:16,0:35:2.84:68,0,3	1/1:21,0:33:30.04:193,30,0	0/1:17,11:32:0.11:0,0,0	0/0:28,0:31:60.07:0,60,1450	1/1:24,8:36:3.01:50,3,0	0/0:34,0:34:56.87:0,57,1280	0/1:11,0:20:3.60:181,0,4	0/0:18,0:16:12.91:0,13,203	0/0:46,0:48:53.09:0,53,1752	0/0:56,0:57:77.91:0,78,2031	0/0:33,0:34:57.17:0,57,1427	0/0:37,0:37:40:0,40,1323	0/0:40,0:42:69.17:0,69,1719	0/0:27,0:29:42.12:0,42,1061	0/0:40,0:40:64.49:0,64,1550	0/0:25,0:27:57.16:0,57,1363	0/1:18,0:20:49.88:50,0,858
chr10	101517818	.	AAATC	A	2298.22	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.269;DP=736;FS=9.236;HRun=0;HaplotypeScore=124.1935;InbreedingCoeff=0.9837;MQ=66.03;MQ0=5;MQRankSum=-3.917;QD=14.64;ReadPosRankSum=-0.690;VQSLOD=2.6940;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,13:18:15.05:243,15,0	1/1:5,8:13:17.98:260,18,0	0/0:17,0:12:12.02:0,12,137	0/0:24,0:19:20.20:0,20,262	0/0:25,0:25:69.13:0,69,1349	0/0:33,0:33:80.94:0,81,1532	0/0:20,0:20:42.08:0,42,804	0/0:40,0:39:54.96:0,55,487	0/0:28,0:28:63.15:0,63,1287	0/0:36,0:36:78.14:0,78,1524	0/0:26,0:26:60.14:0,60,1179	1/1:4,0:27:44.93:400,45,0	1/1:21,0:27:50.87:433,51,0	1/1:10,19:29:30.09:465,30,0	0/0:27,0:27:58:0,58,1076	1/1:8,21:29:33.11:535,33,0	0/0:18,0:18:39.02:0,39,653	1/1:7,0:14:17.98:160,18,0	0/0:20,0:20:23.82:0,24,349	0/0:38,0:38:72.61:0,73,1241	0/0:11,0:11:15.49:0,15,250	0/0:38,0:38:90.19:0,90,1666	0/0:27,0:27:48.06:0,48,753	0/0:27,0:27:51.17:0,51,1130	0/0:37,0:37:72.16:0,72,1409	0/0:41,0:41:69.13:0,69,1131	0/0:37,0:37:69.12:0,69,1334	0/0:9,0:9:21.06:0,21,413
chr10	101519034	.	GTC	G	8912.57	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=14.533;DP=848;FS=2.619;HRun=0;HaplotypeScore=131.4837;InbreedingCoeff=0.9628;MQ=62.89;MQ0=19;MQRankSum=0.428;QD=20.78;ReadPosRankSum=4.232;VQSLOD=5.4594;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,31:40:59.06:822,59,0	1/1:1,11:12:24.07:291,24,0	0/0:45,0:23:33.16:0,33,432	0/0:35,0:23:20.71:0,21,287	0/0:23,1:24:23.54:0,24,834	0/0:21,1:21:8.80:0,9,631	0/0:33,1:34:47.86:0,48,1189	1/1:26,26:49:62.74:799,63,0	0/0:30,0:30:75.26:0,75,1181	0/0:45,0:44:99:0,102,1564	0/0:34,2:36:17.54:0,18,1260	1/1:6,22:28:51.16:619,51,0	1/1:4,19:22:42.13:507,42,0	1/1:2,17:18:30.09:364,30,0	1/1:7,17:23:33.10:400,33,0	1/1:4,19:22:51.16:619,51,0	0/0:28,1:29:29.38:0,29,954	1/1:6,28:32:63.15:748,63,0	1/1:11,16:23:36.05:453,36,0	1/1:9,30:39:59.28:983,59,0	1/1:6,29:35:42.22:707,42,0	0/0:32,1:32:38.92:0,39,995	0/0:26,0:25:30.46:0,30,855	0/0:43,0:43:96.29:0,96,1480	0/0:16,0:16:2.69:0,3,488	1/1:10,23:30:20.78:752,21,0	1/1:4,21:23:48.04:559,48,0	1/1:4,10:13:24.07:291,24,0
chr10	101519200	.	G	GTC	6176.08	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=15.535;DP=809;FS=12.748;HRun=0;HaplotypeScore=153.0724;InbreedingCoeff=0.9213;MQ=54.52;MQ0=18;MQRankSum=-5.412;QD=15.40;ReadPosRankSum=-0.891;VQSLOD=3.9733;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:40,13:54:89.91:1018,90,0	1/1:4,7:11:5.70:189,6,0	0/0:27,0:7:2.99:0,3,23	0/0:50,0:22:19.49:0,19,227	0/0:29,0:29:68.41:0,68,832	0/0:29,0:29:70.08:0,70,864	0/0:22,0:22:51.16:0,51,635	1/1:17,8:25:10.01:492,10,0	0/0:32,0:32:77.82:0,78,933	0/0:44,0:44:99:0,111,1359	0/0:18,0:18:42.09:0,42,496	1/1:4,0:22:18.04:209,18,0	1/1:5,2:26:46.34:565,46,0	1/1:5,25:30:42.13:660,42,0	1/1:28,0:28:8.50:73,8,0	1/1:12,21:33:27.82:682,28,0	0/0:31,0:31:65.50:0,65,799	1/1:13,0:15:21.19:243,21,0	1/1:12,6:15:27.28:331,27,0	1/1:31,3:34:19.92:257,20,0	1/1:14,3:16:4.52:116,5,0	0/0:30,0:30:72.16:0,72,848	0/0:23,0:23:63.14:0,63,734	0/0:43,0:44:99:0,99,1164	0/0:29,0:29:69.18:0,69,835	1/1:34,10:45:43.64:947,44,0	1/1:32,0:32:23.99:262,24,0	1/1:7,2:9:15.78:134,16,0
chr10	101519210	.	C	CTGTG	1869.13	PASS	AB=0.968;AC=12;AF=0.214;AN=56;BaseQRankSum=10.254;DP=813;FS=0.000;HRun=0;HaplotypeScore=194.3347;InbreedingCoeff=0.0509;MQ=51.78;MQ0=19;MQRankSum=-6.349;QD=7.16;ReadPosRankSum=1.738;VQSLOD=2.8237;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:79.70:0,80,756	0/0:9,0:9:16.98:0,17,153	0/0:23,0:5:14.91:0,15,185	0/0:48,0:16:27.54:0,28,542	0/0:30,0:30:84.26:0,84,1543	0/0:28,0:28:78.26:0,78,1525	0/0:25,0:25:66.20:0,66,1215	0/1:28,0:26:99:133,0,280	0/0:31,0:31:93.28:0,93,1707	0/0:50,0:49:99:0,147,2763	0/0:20,0:20:48.16:0,48,899	0/1:21,0:21:47.43:136,0,47	0/1:27,0:27:83.39:275,0,83	0/0:31,0:31:40.60:0,41,233	1/1:30,0:30:8.72:50,9,0	0/0:31,0:31:56.60:0,57,395	0/0:30,0:30:78.25:0,78,1461	0/1:19,0:18:99:156,0,144	0/1:17,0:13:26.69:190,0,27	0/1:36,0:36:14.63:61,0,15	0/0:18,0:18:7.12:0,7,51	0/0:30,0:30:81.25:0,81,1496	0/0:24,0:24:66.18:0,66,1201	0/0:41,0:41:99:0,105,1936	0/0:27,0:27:72.22:0,72,1356	0/1:30,13:46:99:721,0,177	1/1:28,0:28:0.55:275,1,0	0/1:8,0:8:23.40:23,0,45
chr10	101519212	.	C	CTCTCTGTGTA	6461.45	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=5.152;DP=828;FS=3.814;HRun=0;HaplotypeScore=258.5071;InbreedingCoeff=0.5492;MQ=52.58;MQ0=20;MQRankSum=-8.688;QD=21.98;ReadPosRankSum=-1.485;VQSLOD=3.9393;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:66.91:0,67,867	0/0:11,0:11:18.51:0,19,270	0/0:23,0:5:8.99:0,9,135	0/0:45,0:15:29.34:0,29,646	0/0:31,0:31:87.27:0,87,2378	0/0:28,0:28:67.90:0,68,2324	0/0:26,0:26:69.22:0,69,1836	0/1:32,0:30:10.19:904,0,10	0/0:31,0:31:90.30:0,90,2506	0/0:50,0:49:99:0,144,4091	0/0:20,0:20:48.16:0,48,1369	0/1:22,0:22:31.52:32,0,113	0/1:28,0:28:59.10:59,0,226	0/0:32,0:32:53.93:0,54,531	1/1:0,29:31:4.83:126,5,0	0/0:29,0:29:63.95:0,64,696	0/0:30,0:30:81.09:0,81,2271	0/1:20,0:19:99:149,0,184	1/1:19,0:14:33.12:947,33,0	1/1:4,27:37:17.89:429,18,0	1/1:18,0:17:12.01:146,12,0	0/0:31,0:31:81.73:0,82,2290	0/0:25,0:25:66.18:0,66,1843	0/0:42,0:42:99:0,111,2940	0/0:26,0:26:69.22:0,69,2102	0/1:45,0:45:12.59:2486,0,13	1/1:5,17:32:24.08:900,24,0	1/1:9,0:9:19.96:284,20,0
chr10	101519214	.	G	GTA	1472.10	PASS	AB=0.996;AC=16;AF=0.286;AN=56;BaseQRankSum=13.139;DP=820;FS=0.869;HRun=0;HaplotypeScore=166.1722;InbreedingCoeff=0.4332;MQ=52.50;MQ0=20;MQRankSum=-5.598;QD=4.96;ReadPosRankSum=4.431;VQSLOD=2.9827;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:47.94:0,48,369	0/0:11,0:11:9.81:0,10,71	0/0:24,0:6:11.98:0,12,110	0/0:44,0:15:33.06:0,33,442	0/0:33,0:33:87.19:0,87,1249	0/0:27,0:27:78.25:0,78,1152	0/0:27,0:27:72.23:0,72,1069	0/1:32,0:30:99:189,0,172	0/0:32,0:32:90.28:0,90,1341	0/0:50,0:49:99:0,147,2150	0/0:20,0:20:48.14:0,48,695	0/1:20,0:20:43.14:43,0,110	0/1:29,0:29:99:165,0,167	0/1:32,0:32:21.87:22,0,26	1/1:30,0:30:8.41:55,8,0	0/0:30,0:30:11.97:0,12,138	0/0:29,0:29:84.26:0,84,1248	0/0:18,0:17:16.66:0,17,332	1/1:15,1:11:18.64:262,19,0	1/1:35,0:35:21.40:156,21,0	0/1:21,0:20:9.33:59,0,9	0/0:31,0:31:84.20:0,84,1189	0/0:27,0:27:60.19:0,60,895	0/0:41,0:41:99:0,105,1529	0/0:24,0:24:66.21:0,66,988	0/1:43,0:44:76.68:426,0,77	1/1:28,1:29:23.42:208,23,0	1/1:5,2:8:6.02:70,6,0
chr10	101519218	.	GTA	G	703.47	PASS	AB=0.979;AC=14;AF=0.250;AN=56;BaseQRankSum=7.532;DP=836;FS=6.571;HRun=0;HaplotypeScore=167.1771;InbreedingCoeff=0.0170;MQ=52.36;MQ0=21;MQRankSum=-1.449;QD=2.13;ReadPosRankSum=-4.060;VQSLOD=1.1234;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:48,4:52:4.22:242,0,4	0/0:11,0:11:9.13:0,9,28	0/0:32,0:11:6.51:0,7,140	0/0:45,0:16:38.16:0,38,366	0/0:31,0:31:62.75:0,63,1228	0/0:28,0:28:64.26:0,64,1034	0/0:29,0:29:81.08:0,81,1047	0/1:33,0:31:92.92:93,0,115	0/0:35,0:35:99:0,104,1366	0/0:51,0:50:99:0,106,2018	0/0:19,0:19:42.97:0,43,663	1/1:20,0:20:1.93:75,2,0	1/1:30,0:30:9.08:158,9,0	0/1:30,2:32:34.93:35,0,58	0/1:32,0:32:30.70:43,0,31	0/1:30,1:31:27.62:67,0,28	0/0:31,0:31:38.93:0,39,1074	0/1:19,0:18:35.28:35,0,286	0/1:16,0:11:14.97:44,0,15	0/1:36,0:36:13.27:13,0,92	0/1:19,1:19:11.56:21,0,12	0/0:30,0:30:78.06:0,78,1310	0/0:25,0:25:69.07:0,69,1032	0/0:44,0:44:91.03:0,91,1570	0/0:25,0:25:49.51:0,50,1025	0/0:38,2:40:12.74:0,13,334	0/0:30,0:29:15.86:0,16,55	0/1:9,0:9:16.97:35,0,17
chr10	101519220	.	ATG	A	1664.06	PASS	AB=0.960;AC=13;AF=0.232;AN=56;BaseQRankSum=7.282;DP=840;FS=2.918;HRun=0;HaplotypeScore=163.5124;InbreedingCoeff=0.4778;MQ=52.31;MQ0=22;MQRankSum=3.614;QD=6.19;ReadPosRankSum=0.820;VQSLOD=3.1170;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:48,1:49:10.99:338,0,11	0/1:11,0:11:6.35:73,0,6	0/0:33,0:10:29.85:0,30,310	0/0:46,0:17:30.07:0,30,419	0/0:29,1:31:28.78:0,29,984	0/0:31,0:30:30.91:0,31,810	0/0:31,0:31:57.18:0,57,858	0/0:34,0:32:47.52:0,48,355	0/0:35,0:36:29.19:0,29,1032	0/1:50,1:51:13.21:13,0,1427	0/0:20,1:21:36.07:0,36,515	1/1:12,7:20:23.89:250,24,0	1/1:17,12:29:33.50:524,34,0	1/1:30,0:30:21.32:236,21,0	0/0:33,0:33:14.08:0,14,91	1/1:29,0:29:35.86:327,36,0	0/1:28,3:31:38.77:39,0,796	0/1:17,1:17:40.09:40,0,305	0/0:17,0:11:13.66:0,14,86	0/0:35,0:35:20.80:0,21,163	0/0:20,0:19:5.59:0,6,34	0/0:28,0:28:69.07:0,69,1051	0/0:25,0:25:54.18:0,54,840	0/0:45,1:46:9.43:0,9,1269	0/0:23,2:25:21.92:0,22,777	0/0:38,0:38:68.78:0,69,621	0/0:31,0:30:23.89:0,24,191	0/0:9,0:9:2.68:0,3,33
chr10	101520156	.	TA	T	3596.88	PASS	AB=0.917;AC=17;AF=0.304;AN=56;BaseQRankSum=6.357;DP=514;FS=0.773;HRun=9;HaplotypeScore=57.9780;InbreedingCoeff=0.9526;MQ=79.51;MQ0=0;MQRankSum=-1.969;QD=22.07;ReadPosRankSum=1.145;VQSLOD=4.4707;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:15:37:0,37,188	0/0:0,0:9:22.76:0,23,116	0/0:15,0:15:33.05:0,33,345	0/0:12,0:12:17.94:0,18,234	0/0:30,0:30:84.25:0,84,968	0/0:36,0:36:96.27:0,96,1099	0/0:17,0:17:45.11:0,45,499	1/1:2,29:31:87.04:796,87,0	0/0:15,0:15:42.12:0,42,477	0/0:28,0:28:78.23:0,78,899	0/0:17,0:17:51.15:0,51,587	0/0:0,0:11:31.28:0,31,159	0/0:2,0:12:28.36:0,28,143	0/0:1,0:17:39.77:0,40,202	1/1:2,16:18:45.02:412,45,0	0/0:4,0:13:28.73:0,29,175	0/0:13,0:13:36.11:0,36,415	0/1:10,1:11:0.40:0,0,239	1/1:2,10:12:30.01:274,30,0	1/1:2,28:30:72.01:659,72,0	1/1:1,10:11:30.02:275,30,0	0/0:26,1:27:47.73:0,48,786	0/0:22,0:22:63.19:0,63,726	0/0:20,1:21:32.71:0,33,630	0/0:21,0:21:51.13:0,51,573	1/1:4,12:16:36.02:330,36,0	1/1:1,22:23:60.03:549,60,0	1/1:0,11:11:33.02:302,33,0
chr10	101521993	.	A	AGC	1599.01	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.116;DP=432;FS=1.460;HRun=0;HaplotypeScore=68.3129;InbreedingCoeff=0.8881;MQ=79.96;MQ0=1;MQRankSum=-5.390;QD=49.97;ReadPosRankSum=4.301;VQSLOD=4.8182;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:57.19:0,57,874	0/0:5,0:5:15.05:0,15,227	0/0:33,0:30:78:0,78,1096	0/0:15,0:10:2.30:0,2,287	0/0:18,0:18:54.08:0,54,791	0/0:14,0:14:39.13:0,39,594	0/0:15,0:15:30.10:0,30,458	0/0:22,0:22:63.21:0,63,945	0/0:12,0:12:36.12:0,36,545	0/0:20,0:20:54.18:0,54,827	0/0:19,0:19:57.18:0,57,857	1/1:0,16:16:48.16:919,48,0	1/1:0,16:16:42.14:801,42,0	0/0:15,0:15:42.14:0,42,634	0/0:9,0:9:21.07:0,21,321	0/0:12,0:12:33.11:0,33,505	0/0:17,0:17:38.76:0,39,596	0/0:13,0:13:39.13:0,39,597	0/0:22,0:21:60.19:0,60,868	0/0:9,0:9:24.08:0,24,367	0/0:15,0:15:42.14:0,42,641	0/0:15,0:15:45.13:0,45,647	0/0:5,0:5:15.05:0,15,230	0/0:15,0:15:22.15:0,22,617	0/0:15,0:15:45.15:0,45,686	0/0:15,0:15:42.14:0,42,643	0/0:18,0:18:54.11:0,54,757	0/0:7,0:7:21.07:0,21,312
chr10	101523507	.	TTCTCTCTCTCTCTCTC	T	959.03	PASS	AB=1.000;AC=21;AF=0.618;AN=34;BaseQRankSum=1.574;DP=512;FS=3.627;HRun=0;HaplotypeScore=198.0772;InbreedingCoeff=0.2203;MQ=60.68;MQ0=25;MQRankSum=0.466;QD=3.66;ReadPosRankSum=2.254;VQSLOD=2.6650;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,3:24:5.21:139,5,0	./.	./.	./.	./.	0/1:29,0:29:5.78:6,0,32	0/0:20,0:19:12.04:0,12,240	1/1:36,0:36:0.48:21,0,0	0/1:15,0:15:41.23:41,0,121	0/0:17,0:17:3.01:0,3,80	./.	1/1:10,1:13:2.98:22,3,0	1/1:18,4:23:9.02:285,9,0	./.	1/1:19,0:19:6.02:174,6,0	1/1:16,2:18:3.46:25,3,0	0/0:21,0:19:4.91:0,5,160	0/0:15,0:12:5.38:0,5,38	1/1:22,0:21:1.94:24,2,0	./.	./.	./.	0/0:10,0:11:2.98:0,3,21	0/1:32,0:29:14.97:15,0,89	./.	1/1:15,0:15:10.61:304,11,0	1/1:13,1:13:1.42:22,1,0	./.
chr10	101523566	.	TCACACACA	T	317.83	PASS	AB=1.000;AC=6;AF=0.111;AN=54;BaseQRankSum=2.823;DP=509;FS=0.000;HRun=0;HaplotypeScore=144.6115;InbreedingCoeff=0.5464;MQ=40.94;MQ0=66;MQRankSum=-1.870;QD=4.74;ReadPosRankSum=-1.139;VQSLOD=1.9863;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:29:7.68:0,8,288	0/0:9,0:8:15.05:0,15,469	./.	0/0:3,0:2:6.02:0,6,150	0/0:18,0:15:30.10:0,30,887	0/0:20,0:18:36.78:0,37,947	0/0:16,0:14:12.04:0,12,370	0/0:21,0:17:21.07:0,21,529	0/0:16,0:16:21.07:0,21,664	0/0:19,0:19:48.12:0,48,1372	0/0:9,0:8:17.68:0,18,598	1/1:10,0:18:12.04:271,12,0	1/1:11,11:20:8.86:147,9,0	0/0:18,0:15:15.05:0,15,468	0/0:31,0:29:42.12:0,42,1363	0/0:25,0:21:27.09:0,27,873	0/0:18,0:15:30.02:0,30,740	0/0:18,0:11:27.09:0,27,671	0/0:13,0:9:24.06:0,24,521	0/1:12,0:7:14.54:15,0,181	0/0:19,0:11:9.02:0,9,268	0/0:18,0:15:30.10:0,30,884	0/0:14,0:13:24.08:0,24,765	0/0:36,0:28:39.13:0,39,1242	0/1:14,0:13:3.47:3,0,855	0/0:34,0:31:78.27:0,78,2310	0/0:18,0:18:39.13:0,39,1110	0/0:12,0:8:24.08:0,24,711
chr10	101523810	.	AT	A	374.25	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.088;DP=342;FS=1.266;HRun=9;HaplotypeScore=35.6436;InbreedingCoeff=0.9235;MQ=75.87;MQ0=0;MQRankSum=0.641;QD=16.27;ReadPosRankSum=0.554;VQSLOD=3.0771;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:39.12:0,39,450	0/0:9,0:9:24.07:0,24,277	0/0:17,0:14:29.85:0,30,327	0/0:10,0:8:13.99:0,14,119	0/0:9,0:10:29.92:0,30,326	0/0:9,0:9:27.08:0,27,312	0/0:9,0:9:27.08:0,27,312	0/0:21,0:21:48.11:0,48,540	0/0:13,0:13:36.11:0,36,415	0/0:5,0:5:11.87:0,12,118	0/0:14,0:14:36.10:0,36,407	1/1:1,6:7:18.01:164,18,0	1/1:2,14:16:36.02:329,36,0	0/0:14,0:14:30.09:0,30,346	0/0:15,0:15:36.11:0,36,415	0/0:8,0:8:21.06:0,21,242	0/0:17,0:17:42.12:0,42,485	0/0:16,0:16:39.12:0,39,449	0/0:15,0:15:37.22:0,37,399	0/0:11,0:11:30.09:0,30,346	0/0:9,0:9:18.04:0,18,197	0/0:13,0:13:33.08:0,33,371	0/0:7,0:7:21.06:0,21,242	0/0:7,0:7:15.04:0,15,173	0/0:19,0:19:51.15:0,51,588	0/0:19,0:19:45.13:0,45,517	0/0:13,0:13:39.11:0,39,443	0/0:3,0:3:9.03:0,9,104
chr10	101524668	.	C	CA	4429.56	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=-9.711;DP=681;FS=0.346;HRun=10;HaplotypeScore=80.0421;InbreedingCoeff=0.8332;MQ=82.55;MQ0=0;MQRankSum=-0.812;QD=20.23;ReadPosRankSum=-1.026;VQSLOD=5.1608;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,1:51:91.89:0,92,940	0/1:6,0:7:4.94:5,0,109	0/0:27,0:29:27.62:0,28,188	0/1:19,0:18:2.84:3,0,139	0/0:38,1:39:60.35:0,60,699	0/0:21,2:24:6.97:0,7,456	0/0:19,0:20:52.97:0,53,425	1/1:5,12:17:33.55:352,34,0	0/0:16,0:16:26.94:0,27,222	0/0:25,0:26:61.95:0,62,498	0/0:20,0:20:56.84:0,57,459	0/0:5,0:22:32.58:0,33,94	0/0:1,0:17:30.55:0,31,88	0/0:27,0:27:62.86:0,63,517	1/1:5,33:38:78.20:832,78,0	0/0:17,0:17:38.90:0,39,320	0/0:31,0:32:82.90:0,83,671	0/0:24,0:24:50.73:0,51,408	1/1:4,13:18:38.93:398,39,0	1/1:7,20:28:62.95:638,63,0	1/1:6,15:21:1.84:430,2,0	0/0:25,0:25:49.96:0,50,417	0/0:20,0:20:53.91:0,54,443	0/0:29,0:30:82.94:0,83,671	0/0:20,1:23:32.01:0,32,448	1/1:4,20:24:35.48:574,35,0	1/1:4,31:36:87.05:909,87,0	1/1:1,10:11:27.07:288,27,0
chr10	101525243	.	CT	C	4797.62	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.610;DP=609;FS=11.403;HRun=3;HaplotypeScore=69.6463;InbreedingCoeff=0.9984;MQ=81.79;MQ0=0;MQRankSum=-2.084;QD=34.03;ReadPosRankSum=2.702;VQSLOD=4.8676;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:75.24:930,75,0	1/1:0,7:7:18.06:223,18,0	0/0:16,0:16:47.88:0,48,624	0/0:20,0:20:47.94:0,48,630	0/0:23,0:23:69.22:0,69,975	0/0:16,0:16:48.16:0,48,691	0/0:19,0:19:57.19:0,57,820	0/0:39,0:39:99:0,114,1605	0/0:20,0:20:57.18:0,57,803	0/0:23,0:23:69.22:0,69,975	0/0:15,0:15:39.13:0,39,561	1/1:0,19:19:57.18:707,57,0	1/1:0,20:20:57.18:707,57,0	1/1:0,27:27:72.23:893,72,0	0/0:12,0:12:36.12:0,36,519	1/1:0,27:27:75.24:930,75,0	0/0:28,0:28:81.27:0,81,1162	1/1:0,13:13:33.10:409,33,0	0/0:13,0:13:39.11:0,39,541	0/0:25,0:25:69.23:0,69,990	0/0:18,0:18:51.17:0,51,735	0/0:15,0:15:42.13:0,42,584	0/0:28,0:28:81.26:0,81,1147	0/0:24,0:24:72.23:0,72,1017	0/0:37,0:37:99:0,111,1593	0/0:22,0:22:66.22:0,66,950	0/0:41,0:41:99:0,120,1711	0/0:14,0:14:42.14:0,42,604
chr10	101525410	.	TA	T	4303.37	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=9.363;DP=526;FS=0.762;HRun=8;HaplotypeScore=52.9878;InbreedingCoeff=0.9662;MQ=65.53;MQ0=1;MQRankSum=0.190;QD=24.59;ReadPosRankSum=-0.369;VQSLOD=5.2289;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:36.11:0,36,435	0/0:8,0:8:21.05:0,21,244	0/0:8,0:8:9.02:0,9,98	0/0:7,0:6:5.96:0,6,55	0/0:25,0:25:60.18:0,60,725	0/0:17,0:17:51.14:0,51,604	0/0:19,0:19:45.13:0,45,532	1/1:3,26:29:75.11:719,75,0	0/0:20,0:19:48.13:0,48,568	0/0:21,0:21:60.18:0,60,716	0/0:25,0:25:66.20:0,66,788	0/0:10,0:10:24.07:0,24,290	0/0:17,0:17:42.13:0,42,507	0/0:18,0:18:54.16:0,54,639	1/1:1,14:15:39.06:377,39,0	0/0:18,0:18:48.13:0,48,568	0/0:28,0:28:72.22:0,72,869	0/0:9,0:9:24.07:0,24,290	1/1:5,25:30:74.95:698,75,0	1/1:1,21:22:57.04:540,57,0	1/1:0,10:10:27.04:261,27,0	0/0:26,0:26:69.16:0,69,780	0/0:22,0:22:63.19:0,63,761	0/0:5,0:5:12.04:0,12,145	0/0:33,0:33:90.27:0,90,1078	1/1:1,21:22:60.09:579,60,0	1/1:1,36:37:87.14:840,87,0	1/1:0,10:10:30.05:290,30,0
chr10	101525722	.	G	GCGTCCCTTT	10954.14	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-4.995;DP=701;FS=0.000;HRun=0;HaplotypeScore=195.4516;InbreedingCoeff=0.9966;MQ=86.97;MQ0=0;MQRankSum=-14.928;QD=71.13;ReadPosRankSum=-0.519;VQSLOD=4.2146;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:54.14:1682,54,0	1/1:8,0:8:18.06:745,18,0	0/0:29,0:30:66.22:0,66,1575	0/0:24,0:24:48.07:0,48,1033	0/0:30,0:30:66.18:0,66,1776	0/0:27,0:27:63.22:0,63,1795	0/0:37,0:37:84.26:0,84,2291	0/0:33,0:33:66.22:0,66,1723	0/0:23,0:23:63.22:0,63,1802	0/0:27,0:27:75.26:0,75,2159	0/0:29,0:29:57.17:0,57,1506	1/1:13,11:25:45.15:1973,45,0	1/1:15,16:31:57.20:2538,57,0	1/1:25,0:25:36.12:1334,36,0	0/0:24,0:24:60.21:0,60,1701	1/1:21,0:21:48.16:1962,48,0	0/0:25,0:25:69.22:0,69,1894	1/1:11,0:11:18.06:722,18,0	0/0:17,0:17:39.13:0,39,1037	0/0:21,0:21:51.12:0,51,1243	0/0:51,0:51:99:0,138,3819	0/0:25,0:25:48.16:0,48,1317	0/0:19,0:19:39.12:0,39,1050	0/0:36,0:36:84.25:0,84,2262	0/0:14,0:14:39.13:0,39,1123	0/0:18,0:18:39.13:0,39,1127	0/0:29,0:29:69.22:0,69,1923	0/0:8,0:8:24.05:0,24,628
chr10	101525733	.	G	GTCCCTTTCA	12076.45	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=-3.628;DP=719;FS=6.088;HRun=0;HaplotypeScore=190.2058;InbreedingCoeff=0.7861;MQ=84.82;MQ0=0;MQRankSum=-15.957;QD=70.21;ReadPosRankSum=-0.699;VQSLOD=4.1683;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,34:46:63.17:1924,63,0	1/1:1,9:12:20.83:904,21,0	0/0:27,0:27:78.12:0,78,1904	0/0:24,0:24:59.92:0,60,1209	0/0:26,0:26:72.05:0,72,1962	0/0:28,0:28:81.06:0,81,2090	0/0:40,0:40:99:0,105,2674	0/0:31,0:31:87.05:0,87,2040	0/0:30,0:30:84.04:0,84,2135	0/0:31,0:31:87.06:0,87,2444	0/0:24,0:24:66.14:0,66,1746	0/1:22,0:22:40.75:1562,0,41	0/1:28,0:28:59.73:2135,0,60	1/1:7,14:24:57.20:2077,57,0	0/0:24,0:24:69.14:0,69,1932	1/1:2,23:27:54.19:2361,54,0	0/0:29,0:29:87.03:0,87,2196	1/1:4,6:13:24.08:1114,24,0	0/0:19,0:19:57.07:0,57,1307	0/0:21,0:21:63.06:0,63,1489	0/0:50,0:50:99:0,147,4249	0/0:21,0:21:56.82:0,57,1496	0/0:18,0:18:54.05:0,54,1270	0/0:36,0:36:99:0,105,2601	0/0:16,0:16:45.10:0,45,1276	0/0:18,0:18:48.07:0,48,1295	0/0:26,0:26:69.22:0,69,2086	0/0:8,0:8:24.05:0,24,684
chr10	101526008	.	CT	C	861.96	PASS	AB=0.847;AC=30;AF=0.536;AN=56;BaseQRankSum=2.801;DP=488;FS=0.000;HRun=17;HaplotypeScore=82.6071;InbreedingCoeff=0.1589;MQ=70.81;MQ0=8;MQRankSum=1.070;QD=2.51;ReadPosRankSum=2.421;VQSLOD=-0.6888;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,2:33:7.48:7,0,288	1/1:4,2:6:5.65:33,6,0	0/0:16,0:11:6.28:0,6,27	0/0:15,0:13:13.62:0,14,72	0/0:15,1:20:16.07:0,16,181	0/1:15,6:21:48.89:49,0,129	0/0:23,4:26:1.93:0,2,269	0/1:13,7:22:3.18:72,0,3	0/1:12,0:12:14.73:15,0,42	0/1:24,2:25:2.79:3,0,145	0/1:14,3:19:19.93:47,0,20	1/1:5,0:12:12.64:35,13,0	1/1:1,0:14:22.40:63,22,0	0/1:11,2:15:42.36:67,0,42	1/1:9,3:15:19.42:106,19,0	0/1:6,4:10:13.03:28,0,13	0/0:23,0:24:9.89:0,10,195	1/1:9,0:14:10.09:29,10,0	1/1:13,3:18:21.31:111,21,0	0/1:10,2:12:20.56:21,0,57	1/1:5,5:12:14.43:60,14,0	0/0:18,0:18:20.77:0,21,144	0/1:9,0:11:4.98:5,0,26	0/0:22,0:22:32.63:0,33,244	0/1:15,2:18:0.86:1,0,160	1/1:9,9:19:7.24:112,7,0	0/1:19,5:25:7.15:142,0,7	1/1:1,2:2:5.85:33,6,0
chr10	101527131	.	CT	C	165.01	PASS	AB=0.831;AC=10;AF=0.179;AN=56;BaseQRankSum=6.564;DP=566;FS=22.073;HRun=4;HaplotypeScore=152.7498;InbreedingCoeff=-0.1719;MQ=31.02;MQ0=47;MQRankSum=-3.779;QD=1.21;ReadPosRankSum=0.311;VQSLOD=-0.7540;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:13.17:0,13,280	0/0:3,0:3:6.02:0,6,84	0/0:85,0:9:23.06:0,23,266	0/0:95,1:7:20.27:0,20,234	0/0:25,0:23:16.91:0,17,177	0/0:18,0:18:42.73:0,43,551	0/0:15,1:15:6.48:0,6,363	0/1:22,2:18:99:118,0,205	0/0:14,1:14:32.77:0,33,413	0/0:33,1:33:93.24:0,93,1239	0/0:13,0:13:18.70:0,19,213	0/0:6,0:5:3.01:0,3,42	0/1:9,2:11:18.59:19,0,225	0/0:6,0:11:13.66:0,14,227	0/1:8,6:16:56.28:56,0,79	0/0:4,0:5:2.92:0,3,17	0/1:13,1:13:10.14:10,0,208	0/1:5,0:6:29.54:30,0,68	0/1:11,2:11:2.92:3,0,273	0/1:16,4:19:11.69:12,0,64	0/1:1,1:2:0:0,0,0	0/0:18,0:18:8.45:0,8,127	0/0:19,3:20:10.61:0,11,399	0/0:14,1:14:23.47:0,23,345	0/1:15,1:14:13.76:14,0,154	0/0:21,0:21:23.49:0,23,564	0/1:10,1:12:33.51:34,0,199	0/0:2,0:1:3.01:0,3,42
chr10	101527345	.	GTT	G	3024.01	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=0.330;DP=618;FS=8.602;HRun=14;HaplotypeScore=88.3051;InbreedingCoeff=0.9746;MQ=65.85;MQ0=0;MQRankSum=-2.802;QD=16.09;ReadPosRankSum=4.313;VQSLOD=2.5260;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:25:62.33:0,62,631	0/0:2,0:11:27.04:0,27,263	0/0:20,0:17:26.86:0,27,306	0/0:12,0:10:5.78:0,6,121	0/0:30,1:30:42.03:0,42,736	0/0:14,0:14:29.57:0,30,355	0/0:19,0:27:55.58:0,56,649	1/1:8,15:26:37.03:348,37,0	0/0:14,0:17:17.05:0,17,512	0/0:24,1:32:47.21:0,47,767	0/0:10,0:12:26.82:0,27,348	0/0:15,0:23:59.18:0,59,612	0/0:10,0:22:40.34:0,40,372	0/0:11,0:28:32.55:0,33,342	1/1:4,26:32:51.39:566,51,0	0/0:12,0:25:44.56:0,45,439	0/0:20,0:21:53.07:0,53,616	0/0:6,0:18:15:0,15,136	1/1:3,5:11:20.49:163,20,0	1/1:4,22:27:44.65:463,45,0	1/1:5,19:24:41.92:389,42,0	0/0:17,0:21:54.63:0,55,597	0/0:15,0:15:36.11:0,36,479	0/0:29,0:35:94.70:0,95,1153	0/0:13,0:16:32.61:0,33,360	1/1:5,23:31:56.19:542,56,0	1/1:4,24:29:65.68:595,66,0	1/1:1,7:8:17.98:167,18,0
chr10	101527656	.	A	AT	1161.32	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.598;DP=625;FS=2.251;HRun=6;HaplotypeScore=63.3881;InbreedingCoeff=0.9905;MQ=75.60;MQ0=0;MQRankSum=-3.659;QD=28.32;ReadPosRankSum=-0.013;VQSLOD=4.2024;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.12:0,51,520	0/0:13,0:13:33.07:0,33,336	0/0:21,0:21:44.68:0,45,409	0/0:11,0:11:27.06:0,27,271	0/0:37,0:37:99:0,99,1009	0/0:32,0:32:87.19:0,87,888	0/0:21,0:21:51.11:0,51,520	0/0:36,0:36:99:0,99,1010	0/0:17,0:17:48.11:0,48,489	0/0:31,0:31:87.18:0,87,881	0/0:23,0:23:66.14:0,66,672	1/1:2,12:14:36.12:453,36,0	1/1:2,25:27:66.21:830,66,0	0/0:15,0:15:45.10:0,45,459	0/0:19,0:19:54.11:0,54,544	0/0:18,0:18:51.12:0,51,520	0/0:27,0:27:72.16:0,72,735	0/0:7,0:7:15:0,15,144	0/0:18,0:18:48.08:0,48,481	0/0:45,0:46:99:0,125,1247	0/0:20,0:20:57.13:0,57,582	0/0:22,0:22:60.12:0,60,605	0/0:21,0:21:57.13:0,57,582	0/0:9,0:9:27.06:0,27,275	0/0:26,0:26:78.17:0,78,790	0/0:32,0:32:90.19:0,90,913	0/0:25,0:25:63.14:0,63,643	0/0:20,0:20:51.12:0,51,520
chr10	101529244	.	TATATATATATAC	T	821.43	PASS	AC=10;AF=0.200;AN=50;BaseQRankSum=4.997;DP=275;FS=7.135;HRun=0;HaplotypeScore=80.3019;InbreedingCoeff=0.6267;MQ=62.58;MQ0=4;MQRankSum=-3.659;QD=17.86;ReadPosRankSum=1.878;VQSLOD=1.0410;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,17:23:6.02:217,6,0	1/1:2,0:2:3.01:102,3,0	./.	0/0:25,0:11:1.30:0,1,30	0/0:8,0:8:21.07:0,21,835	0/0:13,0:13:30.09:0,30,1446	0/0:1,0:1:3.01:0,3,181	0/0:42,0:42:99:0,114,4821	0/0:3,0:3:6.02:0,6,280	0/0:4,0:4:9.03:0,9,361	0/0:10,0:10:18.06:0,18,893	1/1:1,6:7:6.02:217,6,0	1/1:1,8:9:9.03:325,9,0	./.	0/0:3,0:3:9.03:0,9,483	1/1:5,0:5:3.01:96,3,0	0/0:36,0:36:99:0,99,5051	0/0:8,0:7:5.67:0,6,35	0/0:17,0:16:42.14:0,42,1846	0/0:7,0:7:9.03:0,9,532	0/0:5,0:5:15.05:0,15,752	./.	0/0:1,0:1:3.01:0,3,140	0/0:7,0:7:18.06:0,18,813	0/0:6,0:6:15.05:0,15,720	0/0:6,0:6:18.06:0,18,981	0/0:7,0:7:18.06:0,18,478	0/0:6,0:6:18.06:0,18,1036
chr10	101531266	.	C	CT	2548.57	PASS	AB=0.636;AC=15;AF=0.268;AN=56;BaseQRankSum=-10.479;DP=542;FS=1.337;HRun=12;HaplotypeScore=89.0909;InbreedingCoeff=0.8713;MQ=77.53;MQ0=0;MQRankSum=2.087;QD=14.65;ReadPosRankSum=-1.474;VQSLOD=3.7290;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:24:38.68:0,39,113	0/0:2,0:7:10.74:0,11,34	0/0:25,0:24:20.59:0,21,140	0/0:9,0:8:5.70:0,6,35	0/0:20,0:23:21.66:0,22,295	0/0:8,0:10:19.90:0,20,137	0/0:21,0:21:11.44:0,11,212	1/1:11,22:33:22.21:504,22,0	0/0:12,0:12:26.81:0,27,197	0/0:25,1:28:5.45:0,5,327	0/0:25,0:25:59.59:0,60,433	0/0:2,0:11:16.29:0,16,48	0/0:2,0:28:48.40:0,48,141	0/0:6,0:25:45.63:0,46,139	1/1:8,19:27:29.18:445,29,0	0/0:4,0:15:28.45:0,28,94	0/0:19,0:21:55.69:0,56,397	0/0:3,0:16:26.47:0,26,78	1/1:11,13:24:16.49:300,16,0	1/1:10,18:28:28.83:329,29,0	1/1:3,5:8:12.02:117,12,0	0/0:17,0:19:34.80:0,35,247	0/0:10,0:11:23.84:0,24,175	0/0:11,0:13:27.89:0,28,183	0/0:22,1:24:29.48:0,29,371	1/1:4,17:21:29.13:431,29,0	1/1:4,22:26:19.30:511,19,0	0/1:3,3:7:4.06:107,0,4
chr10	101531347	.	TA	T	1537.28	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.661;DP=582;FS=0.482;HRun=9;HaplotypeScore=65.0253;InbreedingCoeff=0.9881;MQ=77.12;MQ0=0;MQRankSum=-3.863;QD=18.98;ReadPosRankSum=1.597;VQSLOD=3.9664;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,33:39:52.67:734,53,0	1/1:0,4:4:12.01:110,12,0	0/0:13,0:13:33.08:0,33,362	0/0:16,0:16:19.50:0,19,188	0/0:31,0:31:84.24:0,84,961	0/0:23,0:23:66.16:0,66,748	0/0:24,0:24:69.18:0,69,776	0/0:18,0:18:45.13:0,45,519	0/0:15,0:15:45.13:0,45,519	0/0:25,1:26:38.73:0,39,700	0/0:24,0:24:60.17:0,60,684	0/0:19,0:19:54.12:0,54,608	0/0:23,0:23:48.13:0,48,544	1/1:4,22:26:63.02:577,63,0	0/0:25,1:27:38.55:0,39,670	1/1:2,10:12:30.01:275,30,0	0/0:24,0:24:69.19:0,69,786	0/0:17,0:17:51.13:0,51,571	0/0:13,0:13:33.09:0,33,372	0/0:23,0:23:57.13:0,57,625	0/0:15,0:15:42.12:0,42,476	0/0:20,0:20:57.16:0,57,648	0/0:25,0:25:72.21:0,72,830	0/0:20,0:19:57.17:0,57,658	0/0:20,1:21:32.69:0,33,612	0/0:32,0:32:75.22:0,75,866	0/0:25,0:25:69.15:0,69,771	0/0:7,0:7:21:0,21,200
chr10	101531912	.	T	TAA	1815.42	PASS	AB=0.579;AC=6;AF=0.107;AN=56;BaseQRankSum=-5.032;DP=589;FS=1.771;HRun=10;HaplotypeScore=70.4637;InbreedingCoeff=0.6547;MQ=72.29;MQ0=1;MQRankSum=-2.276;QD=23.27;ReadPosRankSum=1.200;VQSLOD=3.3262;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,21:32:4.36:661,0,4	1/1:0,7:6:15.05:224,15,0	0/0:16,0:15:20.82:0,21,198	0/0:16,0:16:5.46:0,5,217	0/0:25,0:25:66.13:0,66,671	0/0:20,0:20:54.08:0,54,541	0/0:21,0:21:60.10:0,60,596	0/0:32,0:34:59.47:0,59,709	0/0:21,0:23:41.51:0,42,461	0/0:21,0:22:50.81:0,51,500	0/0:25,0:25:65.86:0,66,646	0/0:13,0:14:41.83:0,42,409	0/0:15,0:15:36.04:0,36,359	1/1:2,18:20:39.13:564,39,0	0/0:25,0:26:65.87:0,66,653	0/1:5,13:19:16.40:500,0,16	0/0:22,0:23:59.84:0,60,592	0/0:26,0:28:80.60:0,81,770	0/0:13,0:13:38.79:0,39,368	0/0:24,0:24:69.15:0,69,702	0/0:18,0:18:54.12:0,54,549	0/0:20,0:20:48.07:0,48,488	0/0:21,0:21:59.72:0,60,589	0/0:15,0:16:38.82:0,39,378	0/0:25,0:26:47.49:0,47,521	0/0:25,0:25:57.10:0,57,579	0/0:29,0:31:68.54:0,69,726	0/0:7,0:7:18.04:0,18,183
chr10	101532384	.	AAC	A	373.25	PASS	AB=0.872;AC=9;AF=0.167;AN=54;BaseQRankSum=3.544;DP=636;FS=0.000;HRun=0;HaplotypeScore=107.8917;InbreedingCoeff=-0.0065;MQ=62.42;MQ0=21;MQRankSum=3.614;QD=1.87;ReadPosRankSum=1.058;VQSLOD=1.9988;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:18:5.98:0,6,59	0/0:11,0:10:8.98:0,9,86	0/0:25,0:9:0:0,0,0	./.	0/1:21,1:23:15.51:16,0,166	0/1:15,1:15:0.49:0,0,367	0/1:27,5:32:99:107,0,429	0/0:22,0:22:32.67:0,33,277	0/0:22,0:22:14.39:0,14,409	0/0:16,0:17:19.29:0,19,240	0/1:18,5:24:99:118,0,478	0/0:11,0:21:8.94:0,9,69	0/0:5,0:18:11.60:0,12,88	0/0:23,0:19:0.94:0,1,2	0/0:26,0:27:18.47:0,18,179	0/0:29,0:24:3:0,3,30	0/1:32,7:39:70.93:71,0,620	1/1:15,0:11:5.48:29,5,0	0/0:15,0:13:13.98:0,14,139	0/0:14,0:14:2.99:0,3,24	0/0:32,0:29:6.01:0,6,63	0/1:22,5:28:80.18:80,0,400	0/1:19,3:22:78.43:78,0,307	0/0:35,1:36:38.21:0,38,862	0/0:18,3:21:2.59:0,3,444	0/0:10,0:21:24.49:0,24,181	0/0:15,0:25:17.06:0,17,116	0/0:2,0:1:2.99:0,3,23
chr10	101532723	.	T	TTA	6588.38	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-12.032;DP=541;FS=24.300;HRun=0;HaplotypeScore=77.9259;InbreedingCoeff=0.9631;MQ=65.88;MQ0=0;MQRankSum=0.976;QD=38.53;ReadPosRankSum=-0.887;VQSLOD=3.8253;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.07:0,54,643	0/0:13,0:13:36.12:0,36,462	0/0:10,0:10:3.29:0,3,196	0/0:8,0:7:10.01:0,10,71	0/0:13,0:13:39.11:0,39,488	0/0:21,0:21:57.14:0,57,702	0/0:17,0:17:48.09:0,48,570	1/1:9,21:30:62.51:914,63,0	0/0:14,0:14:36.11:0,36,451	0/0:15,0:15:38.99:0,39,469	0/0:16,0:16:39.13:0,39,502	0/0:25,0:25:57.10:0,57,683	0/0:21,0:21:54.10:0,54,658	0/0:22,0:22:44.75:0,45,577	1/1:5,13:18:39.13:658,39,0	0/0:17,0:17:48.13:0,48,592	0/0:21,0:21:51.17:0,51,656	0/0:27,0:27:69.18:0,69,869	1/1:4,13:17:39.09:603,39,0	1/1:0,21:22:63.21:1048,63,0	1/1:1,12:13:30.10:492,30,0	0/0:23,0:23:66.21:0,66,841	0/0:23,0:23:57.16:0,57,708	0/0:22,0:22:51.12:0,51,637	0/0:20,0:20:45.13:0,45,556	1/1:5,32:37:96.30:1560,96,0	1/1:5,21:27:60.21:1011,60,0	1/1:1,6:7:18.06:304,18,0
chr10	101532758	.	GGAGAGAGAGAGAGA	G	293.52	PASS	AB=0.986;AC=9;AF=0.205;AN=44;BaseQRankSum=2.890;DP=488;FS=25.738;HRun=0;HaplotypeScore=194.0841;InbreedingCoeff=0.2635;MQ=60.52;MQ0=25;MQRankSum=-1.332;QD=2.64;ReadPosRankSum=-0.138;VQSLOD=0.8503;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:4.40:0,4,126	0/0:8,0:8:9:0,9,100	./.	./.	0/0:13,0:11:0:0,0,0	0/0:24,0:24:24.07:0,24,485	0/0:18,0:18:5.87:0,6,92	./.	0/0:14,0:14:18.52:0,19,322	0/0:13,0:13:12.04:0,12,313	0/0:17,0:17:9.03:0,9,218	0/0:24,0:24:17.99:0,18,474	0/0:24,0:24:29.47:0,29,652	./.	0/1:21,0:22:29.53:125,0,30	0/1:10,0:10:7.43:7,0,18	0/0:12,0:12:3.01:0,3,62	1/1:19,0:18:3.81:107,4,0	0/0:15,0:14:3.31:0,3,14	./.	1/1:12,0:11:1.82:5,2,0	0/0:23,0:23:9.03:0,9,143	0/0:14,0:13:2.97:0,3,20	0/0:15,0:15:6.02:0,6,139	0/0:13,0:13:12.04:0,12,323	0/1:27,0:27:25.57:26,0,57	1/1:20,0:21:7.99:141,8,0	./.
chr10	101532819	.	G	GACA	757.24	PASS	AB=0.615;AC=5;AF=0.089;AN=56;BaseQRankSum=7.785;DP=542;FS=1.731;HRun=0;HaplotypeScore=102.9986;InbreedingCoeff=0.7316;MQ=78.30;MQ0=20;MQRankSum=-7.144;QD=12.02;ReadPosRankSum=-2.268;VQSLOD=2.7652;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:41.81:0,42,692	0/0:5,0:5:15.05:0,15,259	0/0:26,0:13:32.35:0,32,445	0/0:63,0:32:55.20:0,55,754	0/0:28,0:28:65.66:0,66,1133	0/0:23,0:23:50.17:0,50,824	0/0:19,0:19:35.84:0,36,554	0/0:36,0:36:99:0,108,1726	0/0:15,0:14:31.59:0,32,494	0/0:25,0:24:58.11:0,58,1110	0/0:16,0:15:30.49:0,30,563	1/1:21,3:22:11.99:197,12,0	0/1:9,15:24:16.67:252,0,17	0/0:26,0:26:48.16:0,48,822	0/0:12,0:12:33.11:0,33,550	0/0:17,0:17:48.15:0,48,795	0/0:8,0:8:21.06:0,21,330	1/1:15,0:10:26.59:434,27,0	0/0:18,0:17:41.97:0,42,686	0/0:10,0:10:22.32:0,22,364	0/0:22,0:22:54.18:0,54,933	0/0:10,0:9:24.08:0,24,392	0/0:12,0:12:29.79:0,30,518	0/0:16,0:15:15.05:0,15,260	0/0:11,0:11:8.07:0,8,395	0/0:14,0:14:39.10:0,39,642	0/0:15,0:15:41.03:0,41,664	0/0:9,0:8:24.08:0,24,415
chr10	101532823	.	A	AAAGAG	767.21	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.538;DP=543;FS=6.427;HRun=0;HaplotypeScore=119.3563;InbreedingCoeff=0.9583;MQ=79.47;MQ0=18;MQRankSum=-4.968;QD=13.46;ReadPosRankSum=-1.999;VQSLOD=2.4222;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:51.09:0,51,940	0/0:6,0:6:18.05:0,18,357	0/0:28,0:13:20.68:0,21,519	0/0:64,0:33:51.92:0,52,755	0/0:29,0:29:71.74:0,72,1470	0/0:23,0:23:50.16:0,50,1047	0/0:19,0:19:38.48:0,38,749	0/0:37,0:37:99:0,105,2147	0/0:16,0:15:31.73:0,32,628	0/0:25,0:25:70.74:0,71,1340	0/0:15,0:15:34.02:0,34,742	1/1:6,16:22:9.03:219,9,0	1/1:19,0:19:18.05:333,18,0	0/0:27,0:27:60.07:0,60,1120	0/0:12,0:12:36.11:0,36,753	0/0:17,0:17:48.16:0,48,1027	0/0:8,0:8:24.04:0,24,411	1/1:14,0:9:17.53:349,18,0	0/0:18,0:17:44.86:0,45,855	0/0:10,0:10:24.04:0,24,480	0/0:24,0:24:69.15:0,69,1298	0/0:10,0:9:24.07:0,24,493	0/0:12,0:12:29.73:0,30,651	0/0:16,0:15:15.05:0,15,331	0/0:11,0:11:23.08:0,23,531	0/0:15,0:15:42.13:0,42,836	0/0:15,0:15:38.31:0,38,847	0/0:9,0:8:24.08:0,24,517
chr10	101533133	.	C	CT	1847.56	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.897;DP=538;FS=2.532;HRun=7;HaplotypeScore=49.9243;InbreedingCoeff=0.9599;MQ=72.35;MQ0=0;MQRankSum=-2.354;QD=28.42;ReadPosRankSum=1.284;VQSLOD=4.3085;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:48.06:0,48,458	0/0:12,0:12:30.05:0,30,290	0/0:12,1:13:22.75:0,23,224	0/0:7,0:7:6:0,6,56	0/0:33,0:33:78.12:0,78,752	0/0:21,0:21:57.09:0,57,550	0/0:15,0:15:42.06:0,42,406	0/0:28,0:28:60.38:0,60,591	0/0:18,0:18:42.06:0,42,406	0/0:26,0:26:75.11:0,75,720	0/0:24,0:24:66.10:0,66,637	1/1:3,17:20:51.16:613,51,0	1/1:0,17:17:45.14:544,45,0	0/0:19,0:19:51.08:0,51,493	0/0:18,0:18:45.07:0,45,435	0/0:18,0:18:51.07:0,51,487	0/0:27,0:27:81.13:0,81,782	1/1:3,25:28:69.21:833,69,0	0/0:24,0:24:66.09:0,66,629	0/0:27,0:27:78.11:0,78,747	0/0:10,0:10:27.04:0,27,261	0/0:8,0:8:24.04:0,24,232	0/0:26,0:26:66.10:0,66,637	0/0:12,0:12:33.05:0,33,319	0/0:14,0:14:36.06:0,36,347	0/0:24,0:24:65.97:0,66,623	0/0:20,0:20:48.05:0,48,457	0/0:8,0:8:21.03:0,21,203
chr10	101533298	.	TA	T	2383.20	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.217;DP=556;FS=0.000;HRun=2;HaplotypeScore=54.9136;InbreedingCoeff=0.9992;MQ=79.54;MQ0=0;MQRankSum=-4.903;QD=33.10;ReadPosRankSum=2.711;VQSLOD=3.5798;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:51.17:662,51,0	1/1:0,11:11:33.02:406,33,0	0/0:12,0:12:36.12:0,36,505	0/0:15,0:15:42.14:0,42,615	0/0:26,0:26:75.25:0,75,1124	0/0:22,0:22:66.22:0,66,977	0/0:20,0:20:60.20:0,60,896	0/0:27,0:27:81.23:0,81,1121	0/0:29,0:29:81.26:0,81,1190	0/0:25,0:25:75.24:0,75,1063	0/0:21,0:21:63.21:0,63,943	0/0:20,0:20:60.20:0,60,898	0/0:20,0:20:60.20:0,60,898	1/1:0,22:22:60.19:774,60,0	0/0:16,0:16:42.13:0,42,608	1/1:0,19:19:54.18:701,54,0	0/0:22,0:22:63.16:0,63,897	0/0:16,0:16:48.14:0,48,693	0/0:26,0:26:75.25:0,75,1124	0/0:15,0:15:45.15:0,45,674	0/0:11,0:11:33.10:0,33,473	0/0:23,0:23:69.23:0,69,1034	0/0:18,0:18:51.16:0,51,726	0/0:17,0:17:51.12:0,51,717	0/0:29,0:29:87.28:0,87,1284	0/0:25,0:25:72.23:0,72,1057	0/0:21,0:21:63.20:0,63,921	0/0:8,0:8:24.08:0,24,359
chr10	101533459	.	G	GTGTC	6818.72	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.384;DP=714;FS=3.195;HRun=0;HaplotypeScore=118.7661;InbreedingCoeff=0.9988;MQ=81.07;MQ0=0;MQRankSum=-4.304;QD=65.56;ReadPosRankSum=3.529;VQSLOD=7.2577;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:40:81.28:2262,81,0	1/1:0,8:9:24.08:669,24,0	0/0:23,0:23:59.37:0,59,1122	0/0:31,0:31:92.92:0,93,1558	0/0:20,0:20:60.19:0,60,1162	0/0:21,0:21:60.14:0,60,1054	0/0:32,0:32:96.28:0,96,1786	0/0:36,0:36:99:0,99,1800	0/0:30,0:30:90.30:0,90,1761	0/0:25,0:25:72.22:0,72,1328	0/0:13,0:13:39.08:0,39,670	0/0:33,0:33:99:0,99,1965	0/0:37,0:37:99:0,108,2116	1/1:3,20:25:63.22:1711,63,0	0/0:43,0:43:99:0,126,2397	1/1:1,27:30:78.27:2176,78,0	0/0:35,0:35:99:0,102,1824	0/0:21,0:21:63.19:0,63,1218	0/0:18,0:18:54.15:0,54,1029	0/0:23,0:23:69.19:0,69,1248	0/0:30,0:30:87.26:0,87,1653	0/0:14,0:14:39.13:0,39,767	0/0:23,0:23:66.23:0,66,1310	0/0:23,0:23:66.20:0,66,1280	0/0:26,0:26:75.22:0,75,1425	0/0:21,0:21:60.20:0,60,1158	0/0:24,0:24:69.20:0,69,1302	0/0:8,0:8:24.08:0,24,479
chr10	101533598	.	AG	A	450.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.046;DP=658;FS=2.417;HRun=1;HaplotypeScore=89.3002;InbreedingCoeff=0.9997;MQ=92.35;MQ0=0;MQRankSum=-0.621;QD=34.65;ReadPosRankSum=2.314;VQSLOD=3.6938;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,1955	0/0:15,0:15:45.13:0,45,692	0/0:32,0:32:96.32:0,96,1514	0/0:24,0:24:72.19:0,72,1070	0/0:18,0:18:54.18:0,54,860	0/0:25,0:25:75.21:0,75,1146	0/0:21,0:21:63.18:0,63,959	0/0:42,0:42:99:0,126,1875	0/0:19,0:19:57.19:0,57,909	0/0:17,0:17:48.16:0,48,767	0/0:12,0:12:36.12:0,36,568	0/0:31,0:31:93.30:0,93,1460	0/0:30,0:30:90.29:0,90,1413	0/0:20,0:20:60.19:0,60,936	0/0:29,0:29:87.30:0,87,1391	0/0:30,0:30:87.30:0,87,1388	0/0:19,0:19:57.19:0,57,906	1/1:0,13:13:39.13:545,39,0	0/0:15,0:15:45.12:0,45,672	0/0:24,0:24:69.24:0,69,1100	0/0:39,0:39:99:0,114,1763	0/0:18,0:18:54.18:0,54,863	0/0:16,0:16:48.13:0,48,702	0/0:29,0:29:87.30:0,87,1386	0/0:14,0:14:39.13:0,39,623	0/0:26,0:26:75.26:0,75,1197	0/0:20,0:20:59.94:0,60,917	0/0:16,0:16:48.16:0,48,767
chr10	101533745	.	C	CT	826.77	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=3.343;DP=257;FS=7.631;HRun=0;HaplotypeScore=50.2019;InbreedingCoeff=0.8232;MQ=84.35;MQ0=0;MQRankSum=-0.609;QD=10.74;ReadPosRankSum=-1.924;VQSLOD=2.7961;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:32.37:0,32,247	0/0:5,0:5:14.98:0,15,124	0/0:15,0:9:9.48:0,9,102	0/0:25,0:15:37.47:0,37,327	0/0:4,0:4:9.46:0,9,76	0/0:8,0:8:16.64:0,17,129	0/0:19,0:19:40.13:0,40,297	1/1:2,11:13:32.72:254,33,0	0/0:3,0:3:6:0,6,51	0/0:2,0:2:6.01:0,6,63	0/0:4,0:4:11.99:0,12,102	0/0:7,0:7:17.96:0,18,145	0/0:6,0:6:8.99:0,9,76	0/0:7,0:7:20.99:0,21,180	1/1:2,10:12:3.01:36,3,0	0/0:14,0:14:35.95:0,36,301	0/0:7,0:7:17.95:0,18,145	0/0:8,0:8:20.82:0,21,157	1/1:14,0:14:33.25:296,33,0	1/1:6,0:6:13.81:106,14,0	1/1:6,0:6:2.85:34,3,0	0/0:7,0:7:8.84:0,9,77	0/0:5,0:5:14.22:0,14,111	0/0:12,0:12:27.88:0,28,211	0/0:7,0:7:17.92:0,18,144	1/1:2,5:7:14.93:121,15,0	1/1:11,1:12:5.97:47,6,0	1/1:6,1:7:14.93:119,15,0
chr10	101534813	.	T	TAA	20334.51	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-18.393;DP=779;FS=14.928;HRun=0;HaplotypeScore=80.2376;InbreedingCoeff=0.9998;MQ=81.39;MQ0=2;MQRankSum=-0.797;QD=52.95;ReadPosRankSum=-0.327;VQSLOD=3.9112;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,47:48:99:2338,117,0	1/1:0,10:10:30.10:598,30,0	0/0:16,0:16:42.13:0,42,646	0/0:24,0:24:65.65:0,66,925	0/0:31,0:31:90.29:0,90,1430	0/0:36,0:36:99:0,108,1731	0/0:27,0:27:81.28:0,81,1316	1/1:2,42:44:99:2497,129,0	0/0:22,0:22:66.21:0,66,1050	0/0:25,0:25:72.23:0,72,1113	0/0:26,0:26:78.24:0,78,1221	0/0:24,0:24:72.25:0,72,1165	0/0:26,0:26:78.27:0,78,1262	1/1:0,31:31:84.29:1679,84,0	1/1:0,27:29:72.25:1439,72,0	1/1:0,28:30:75.26:1499,75,0	0/0:36,0:36:99:0,108,1730	1/1:1,14:15:42.10:777,42,0	1/1:1,21:24:66.19:1221,66,0	1/1:0,30:29:87.04:1569,87,0	1/1:0,41:42:99:2179,111,0	0/0:26,0:26:75.23:0,75,1168	0/0:19,0:19:57.18:0,57,901	0/0:33,0:33:99:0,99,1609	0/0:24,0:24:69.24:0,69,1126	1/1:1,34:35:99:1965,102,0	1/1:0,34:35:99:2032,102,0	1/1:0,9:9:27.09:539,27,0
chr10	101536329	.	T	TAGACAG	20297.16	PASS	AB=0.684;AC=29;AF=0.518;AN=56;BaseQRankSum=-8.386;DP=809;FS=8.630;HRun=0;HaplotypeScore=160.3227;InbreedingCoeff=0.9342;MQ=62.86;MQ0=1;MQRankSum=-16.166;QD=46.98;ReadPosRankSum=-2.527;VQSLOD=3.5397;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,18:31:24.08:795,24,0	1/1:4,14:20:39.13:1292,39,0	0/0:30,0:26:32.80:0,33,511	0/0:36,0:33:25:0,25,571	0/0:34,0:34:69.24:0,69,1450	0/0:39,0:39:87.28:0,87,1775	0/0:33,0:33:78.19:0,78,1443	1/1:31,15:51:78.23:1973,78,0	0/0:22,0:22:54.19:0,54,1128	0/0:35,0:35:87.30:0,87,1784	0/0:20,0:20:42.14:0,42,839	1/1:15,22:38:48.16:1588,48,0	1/1:17,25:43:63.22:2059,63,0	1/1:8,24:33:60.21:1987,60,0	1/1:6,24:30:54.19:1787,54,0	1/1:10,17:27:39.13:1288,39,0	0/0:22,0:22:48.14:0,48,963	0/1:7,6:13:3.91:383,0,4	1/1:10,8:20:33.06:851,33,0	1/1:14,21:35:54.19:1788,54,0	1/1:7,8:16:6.02:199,6,0	0/0:25,0:25:57.20:0,57,1161	0/0:26,0:26:54.18:0,54,1118	0/0:23,0:22:45.14:0,45,883	0/0:32,0:32:66.20:0,66,1309	1/1:9,20:30:69.22:1997,69,0	1/1:8,21:30:42.14:1317,42,0	1/1:3,10:13:30.10:994,30,0
chr10	101537228	.	C	CACA	520.24	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.322;DP=673;FS=2.596;HRun=0;HaplotypeScore=98.2451;InbreedingCoeff=0.9944;MQ=87.64;MQ0=0;MQRankSum=-4.165;QD=47.29;ReadPosRankSum=0.980;VQSLOD=5.7251;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.27:0,87,1412	0/0:8,0:8:24.05:0,24,350	0/0:26,0:26:28.06:0,28,931	0/0:23,0:24:59.87:0,60,891	0/0:36,0:36:99:0,108,1685	0/0:35,0:35:99:0,102,1671	0/0:34,0:34:99:0,102,1594	0/0:24,0:24:66.20:0,66,1005	0/0:18,0:18:51.17:0,51,849	0/0:33,0:33:99:0,99,1528	0/0:17,0:17:48.15:0,48,773	0/0:31,0:31:87.28:0,87,1406	0/0:29,0:29:81.21:0,81,1266	0/0:18,0:18:54.15:0,54,848	0/0:25,0:25:72.22:0,72,1149	0/0:27,0:27:73.12:0,73,1170	0/0:19,0:19:54.16:0,54,864	1/1:3,8:11:28.65:615,29,0	0/0:22,0:22:63.17:0,63,1019	0/0:29,0:29:84.26:0,84,1339	0/0:33,0:33:93.25:0,93,1442	0/0:18,0:18:51.16:0,51,812	0/0:20,0:20:57.17:0,57,922	0/0:17,0:17:45.15:0,45,749	0/0:22,0:22:66.21:0,66,1063	0/0:31,0:31:84.27:0,84,1352	0/0:27,0:27:75.24:0,75,1224	0/0:8,0:8:24.05:0,24,366
chr10	101537324	.	AC	A	295.06	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.417;DP=597;FS=2.911;HRun=2;HaplotypeScore=55.7771;InbreedingCoeff=0.9837;MQ=89.01;MQ0=0;MQRankSum=-3.311;QD=29.51;ReadPosRankSum=1.203;VQSLOD=3.1909;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.16:0,63,899	0/0:11,0:11:33.11:0,33,495	0/0:17,0:17:50.38:0,50,707	0/0:27,1:28:71.55:0,72,944	0/0:31,0:31:93.30:0,93,1371	0/0:30,0:30:90.27:0,90,1308	0/0:25,0:25:75.24:0,75,1105	0/0:43,0:43:99:0,126,1883	0/0:18,0:18:54.18:0,54,805	0/0:21,0:21:63.21:0,63,945	0/0:19,0:19:57.16:0,57,825	0/0:23,0:23:69.23:0,69,1030	0/0:30,0:30:90.29:0,90,1328	0/0:22,0:22:66.22:0,66,989	0/0:22,0:22:66.21:0,66,963	0/0:19,0:19:54.17:0,54,789	0/0:24,0:24:72.23:0,72,1056	1/1:0,10:10:30.10:389,30,0	0/0:15,0:15:39.13:0,39,579	0/0:21,0:21:60.20:0,60,894	0/0:19,0:19:57.19:0,57,853	0/0:15,0:15:45.15:0,45,674	0/0:19,0:19:54.18:0,54,809	0/0:21,0:21:63.20:0,63,925	0/0:17,0:17:51.17:0,51,765	0/0:30,0:30:90.30:0,90,1347	0/0:21,0:21:63.21:0,63,931	0/0:5,0:5:15.05:0,15,225
chr10	101538584	.	C	CAT	299.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.269;DP=834;FS=11.615;HRun=0;HaplotypeScore=95.0754;InbreedingCoeff=0.9945;MQ=84.60;MQ0=0;MQRankSum=-0.862;QD=37.44;ReadPosRankSum=1.460;VQSLOD=5.2873;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,178,2522	0/0:13,0:13:33.10:0,33,465	0/0:27,0:27:78.20:0,78,1071	0/0:27,0:27:72.07:0,72,934	0/0:36,0:36:93.30:0,93,1347	0/0:23,0:23:60.16:0,60,837	0/0:26,0:26:75.19:0,75,1008	0/0:30,0:30:78.23:0,78,1064	0/0:34,0:34:96.27:0,96,1332	0/0:27,0:27:75.22:0,75,1036	0/0:25,0:25:69.19:0,69,972	0/0:39,0:39:99:0,114,1639	0/0:49,0:49:99:0,144,2106	0/0:37,0:37:99:0,111,1633	0/0:32,0:32:96.32:0,96,1412	0/0:36,0:36:99:0,108,1549	0/0:32,0:32:96.32:0,96,1407	1/1:1,7:8:19.98:391,20,0	0/0:18,0:18:48.11:0,48,632	0/0:36,0:36:99:0,108,1589	0/0:33,0:33:93.31:0,93,1367	0/0:35,0:35:99:0,105,1546	0/0:20,0:20:57.19:0,57,839	0/0:39,0:39:99:0,117,1682	0/0:20,0:20:60.20:0,60,883	0/0:29,0:29:87.26:0,87,1211	0/0:25,0:25:72.22:0,72,1039	0/0:18,0:18:54.18:0,54,795
chr10	101538890	.	A	ATCTC	1042.05	PASS	AB=0.915;AC=21;AF=0.404;AN=52;BaseQRankSum=-3.312;DP=691;FS=43.997;HRun=0;HaplotypeScore=150.4674;InbreedingCoeff=0.1080;MQ=66.36;MQ0=24;MQRankSum=1.174;QD=2.66;ReadPosRankSum=-4.317;VQSLOD=-0.6843;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:29:12.01:156,12,0	1/1:4,6:11:6.02:123,6,0	./.	./.	0/0:37,0:36:21.70:0,22,263	0/0:13,0:21:20.40:0,20,193	0/0:10,0:12:3:0,3,28	1/1:39,0:38:2.29:6,2,0	0/0:19,0:19:6.02:0,6,90	0/1:22,0:23:29.12:117,0,29	1/1:10,0:13:1.89:10,2,0	0/0:9,0:12:5.75:0,6,56	0/0:21,0:25:15.02:0,15,140	0/1:17,3:24:0.01:0,0,0	0/1:33,0:33:17.70:297,0,18	0/0:13,0:18:12.01:0,12,112	0/0:12,0:15:9.01:0,9,83	0/1:15,0:13:3.98:4,0,34	0/0:20,0:18:1.55:0,2,4	0/1:26,0:33:4.38:4,0,97	0/1:27,0:27:0.17:216,0,0	0/0:19,0:18:11.75:0,12,165	0/1:24,0:25:6.43:6,0,40	0/1:14,0:20:4.66:7,0,5	0/1:20,0:28:12.67:13,0,45	0/1:22,0:28:33.01:131,0,33	0/1:24,0:23:27.62:28,0,37	1/1:14,0:13:6.47:71,6,0
chr10	101538986	.	GTTAA	G	191.43	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.212;DP=553;FS=6.019;HRun=0;HaplotypeScore=100.8429;InbreedingCoeff=0.8507;MQ=74.43;MQ0=0;MQRankSum=-2.959;QD=38.29;ReadPosRankSum=0.005;VQSLOD=3.1303;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.25:0,72,1919	0/0:4,0:4:12.04:0,12,292	0/0:19,0:18:6.99:0,7,888	0/0:18,0:16:29.37:0,29,759	0/0:22,0:22:66.23:0,66,1732	0/0:30,0:30:87.30:0,87,2292	0/0:17,0:17:48.16:0,48,1269	0/0:32,0:32:93.30:0,93,2370	0/0:17,0:17:48.16:0,48,1274	0/0:20,0:20:60.20:0,60,1490	0/0:24,0:24:72.24:0,72,1857	0/0:24,0:24:51.17:0,51,1252	0/0:30,0:30:75.20:0,75,1868	0/0:19,0:19:51.18:0,51,1322	0/0:23,0:23:69.24:0,69,1840	0/0:19,0:19:57.19:0,57,1444	0/0:27,0:27:77.89:0,78,1949	1/1:0,5:5:15.05:280,15,0	0/0:14,0:14:39.13:0,39,989	0/0:26,0:26:75.26:0,75,1997	0/0:8,0:8:21.07:0,21,560	0/0:19,0:19:54.19:0,54,1420	0/0:22,0:22:66.20:0,66,1641	0/0:15,0:15:42.10:0,42,1042	0/0:20,0:20:60.21:0,60,1569	0/0:29,0:29:81.28:0,81,2161	0/0:20,0:20:57.20:0,57,1520	0/0:4,0:4:12.01:0,12,207
chr10	101539012	.	G	GAGAGACAGAGAC	3477.51	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-3.598;DP=680;FS=5.142;HRun=0;HaplotypeScore=217.5593;InbreedingCoeff=0.7117;MQ=66.95;MQ0=5;MQRankSum=-6.648;QD=36.61;ReadPosRankSum=-1.985;VQSLOD=2.6938;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:63.06:0,63,1638	0/0:8,0:8:21.07:0,21,671	0/0:34,0:19:11.91:0,12,121	0/1:41,0:24:13.29:13,0,19	0/0:27,0:27:54.15:0,54,1592	0/0:33,0:33:57.17:0,57,1711	0/0:27,0:27:51.09:0,51,1447	0/0:38,0:38:33.10:0,33,743	0/0:17,0:17:33.11:0,33,1003	0/0:20,0:20:45.14:0,45,1418	0/0:27,0:27:45.08:0,45,1196	1/1:9,14:26:30.10:1659,30,0	1/1:14,13:28:33.11:1806,33,0	0/0:24,0:24:42.13:0,42,1294	0/0:30,0:30:63.20:0,63,1870	0/0:26,0:26:63.19:0,63,1899	0/0:30,0:31:63.65:0,64,1838	0/0:6,0:7:10.14:0,10,144	0/0:22,0:21:9.17:0,9,409	0/0:28,0:28:45.13:0,45,1358	0/0:13,0:13:24.08:0,24,695	0/0:22,0:22:51.15:0,51,1478	0/0:25,0:25:48.16:0,48,1496	0/0:17,0:17:38.27:0,38,1155	0/0:26,0:26:48.16:0,48,1578	0/0:25,0:25:45.15:0,45,1443	0/0:27,0:27:54.17:0,54,1635	0/0:2,0:2:6.02:0,6,207
chr10	101541067	.	AAAAGAAAG	A	2212.10	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=3.274;DP=559;FS=0.000;HRun=0;HaplotypeScore=166.6772;InbreedingCoeff=0.8006;MQ=59.99;MQ0=5;MQRankSum=-8.065;QD=29.11;ReadPosRankSum=3.949;VQSLOD=3.1109;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:17.78:0,18,159	0/0:7,0:7:18.04:0,18,231	0/0:18,0:13:12.04:0,12,417	0/0:21,0:15:15.21:0,15,541	0/0:29,0:29:69.18:0,69,2288	0/0:21,0:21:60.21:0,60,2172	0/0:12,0:12:24.07:0,24,635	0/0:36,0:35:85:0,85,1311	0/0:21,0:21:63.22:0,63,2296	0/0:15,0:15:39.03:0,39,1176	0/0:22,0:22:60.19:0,60,2078	1/1:3,17:20:33.11:832,33,0	1/1:4,16:20:24.08:583,24,0	1/1:5,19:24:36.12:905,36,0	0/0:21,0:21:45.15:0,45,1014	0/0:16,0:16:9.03:0,9,126	0/0:23,0:23:50.76:0,51,1596	0/1:12,0:12:39.98:40,0,139	0/0:14,0:14:32.91:0,33,369	0/0:33,0:33:84.26:0,84,2261	0/0:10,0:10:18.06:0,18,668	0/0:17,0:17:36.11:0,36,1266	0/0:22,0:22:60.19:0,60,2166	0/0:17,0:17:48.16:0,48,1693	0/0:20,0:19:48.13:0,48,1597	0/0:28,0:28:66.20:0,66,1567	0/0:29,0:28:84.18:0,84,2056	0/0:10,0:11:25.86:0,26,458
chr10	101541086	.	A	AGAAAGAAG	2879.63	PASS	AB=0.943;AC=15;AF=0.268;AN=56;BaseQRankSum=3.650;DP=561;FS=20.455;HRun=0;HaplotypeScore=168.0549;InbreedingCoeff=0.1495;MQ=53.07;MQ0=7;MQRankSum=-1.245;QD=11.90;ReadPosRankSum=-2.230;VQSLOD=1.2553;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:4,17:21:11.69:110,0,12	1/1:10,0:9:24.02:389,24,0	0/0:12,0:6:18.02:0,18,300	0/0:20,0:11:24.03:0,24,363	0/0:23,0:23:66.18:0,66,1548	0/0:22,0:22:60.12:0,60,1317	0/0:10,0:10:27.05:0,27,409	0/1:34,0:33:48.48:424,0,48	0/0:26,0:26:75.17:0,75,1603	0/0:16,0:16:44.63:0,45,848	0/0:25,0:24:69.16:0,69,1483	0/0:20,0:20:23.97:0,24,528	0/0:16,0:16:3.36:0,3,295	0/0:20,0:20:21.03:0,21,457	0/1:20,0:20:45.44:262,0,45	1/1:0,17:17:9.03:393,9,0	0/0:21,0:21:31.29:0,31,946	0/1:10,0:11:84.82:85,0,102	0/1:16,0:14:36.38:555,0,36	0/1:33,0:33:48.37:48,0,198	1/1:10,0:10:7.35:51,7,0	0/0:19,0:19:54.09:0,54,963	0/0:27,0:27:81.13:0,81,1472	0/0:20,0:20:57.13:0,57,1138	0/0:21,0:20:57.14:0,57,1125	0/1:26,0:26:63.19:322,0,63	0/1:30,0:29:67.93:249,0,68	0/1:13,0:14:8.87:161,0,9
chr10	101541101	.	AAGAG	A	1982.05	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=11.138;DP=552;FS=24.687;HRun=0;HaplotypeScore=132.1949;InbreedingCoeff=0.6178;MQ=55.25;MQ0=5;MQRankSum=2.091;QD=9.67;ReadPosRankSum=1.678;VQSLOD=1.4352;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:4.88:5,0,120	0/1:7,0:6:1.62:2,0,358	0/0:16,0:7:17.89:0,18,242	0/0:19,0:11:27.03:0,27,403	0/0:25,0:25:72.18:0,72,1515	0/0:18,0:18:54.17:0,54,1313	0/0:15,0:15:42.11:0,42,864	0/1:28,0:28:42.49:285,0,42	0/0:26,0:26:78.22:0,78,1746	0/0:21,0:21:57.19:0,57,1276	0/0:31,0:30:81.21:0,81,1737	0/0:22,0:22:50.52:0,51,671	0/0:15,0:15:29.38:0,29,322	0/0:19,0:19:34.74:0,35,311	1/1:14,4:18:23.89:276,24,0	0/0:12,0:12:11.62:0,12,102	0/0:20,0:20:54.05:0,54,1052	0/1:11,0:11:31.33:31,0,48	1/1:17,0:15:14.30:248,14,0	1/1:36,0:36:25.17:487,25,0	0/1:11,0:11:9.02:40,0,9	0/0:23,0:23:69.21:0,69,1532	0/0:25,0:25:74.90:0,75,1684	0/0:18,0:18:31.16:0,31,1150	0/0:22,0:21:54.10:0,54,1190	1/1:24,1:25:30.49:379,30,0	1/1:22,2:24:43.51:304,44,0	1/1:11,0:10:11.01:116,11,0
chr10	101541105	.	GAGAA	G	5279.26	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=7.752;DP=553;FS=33.160;HRun=0;HaplotypeScore=120.6844;InbreedingCoeff=0.9839;MQ=55.87;MQ0=4;MQRankSum=3.337;QD=32.19;ReadPosRankSum=2.305;VQSLOD=2.6637;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:18.02:0,18,292	0/0:11,0:10:27.08:0,27,563	0/0:16,0:7:18.06:0,18,320	0/0:17,0:10:18.06:0,18,359	0/0:25,0:25:66.20:0,66,1517	0/0:20,0:20:60.19:0,60,1329	0/0:18,0:18:54.14:0,54,1154	1/1:6,14:20:39.09:570,39,0	0/0:27,0:27:75.23:0,75,1686	0/0:20,0:20:60.20:0,60,1386	0/0:30,0:29:78.27:0,78,1766	0/0:23,0:23:48.11:0,48,915	0/0:16,0:16:33.10:0,33,576	0/0:19,0:19:32.97:0,33,456	1/1:17,1:18:36.58:544,37,0	0/0:11,0:11:12.04:0,12,182	0/0:21,0:21:51.16:0,51,1078	0/0:11,0:11:21.74:0,22,177	1/1:7,9:14:33.05:483,33,0	1/1:34,4:38:99:1429,105,0	1/1:5,5:10:15.04:181,15,0	0/0:23,0:23:63.22:0,63,1522	0/0:27,0:27:75.24:0,75,1685	0/0:19,0:19:48.16:0,48,1111	0/0:19,0:19:48.14:0,48,1092	1/1:22,2:24:60.17:925,60,0	1/1:23,4:27:72.18:960,72,0	1/1:4,6:10:14.05:187,14,0
chr10	101543533	.	C	CTTT	156.41	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.704;DP=535;FS=4.093;HRun=8;HaplotypeScore=70.8152;InbreedingCoeff=0.9063;MQ=69.77;MQ0=0;MQRankSum=-0.679;QD=31.28;ReadPosRankSum=-0.053;VQSLOD=2.2597;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.10:0,48,599	0/0:10,0:10:27.09:0,27,354	0/0:13,0:12:10.81:0,11,294	0/0:11,0:10:14.96:0,15,175	0/0:33,0:33:91.77:0,92,1200	0/0:22,0:23:55.44:0,55,730	0/0:11,0:11:27.08:0,27,354	0/0:28,0:28:72.18:0,72,904	0/0:17,0:17:48.15:0,48,628	0/0:24,0:24:63.14:0,63,769	0/0:25,0:25:69.21:0,69,903	0/0:17,0:17:42.13:0,42,552	0/0:25,0:25:57.16:0,57,749	0/0:19,0:19:48.15:0,48,630	0/0:21,0:21:54.14:0,54,694	0/0:16,0:16:45.14:0,45,589	0/0:13,0:13:33.06:0,33,413	1/1:0,5:5:12.04:242,12,0	0/0:21,0:21:57.16:0,57,722	0/0:34,0:34:96.26:0,96,1226	0/0:14,0:14:42.14:0,42,551	0/0:18,0:18:54.18:0,54,707	0/0:22,0:22:63.20:0,63,827	0/0:15,0:15:39.11:0,39,513	0/0:26,0:26:63.17:0,63,827	0/0:25,0:25:63.19:0,63,827	0/0:24,0:23:69.20:0,69,890	0/0:6,0:6:18.06:0,18,237
chr10	101543914	.	A	ATATCT	776.87	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.368;DP=587;FS=6.917;HRun=0;HaplotypeScore=106.2562;InbreedingCoeff=0.9902;MQ=86.38;MQ0=0;MQRankSum=-4.313;QD=77.69;ReadPosRankSum=0.599;VQSLOD=5.7260;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.28:0,90,1862	0/0:11,0:11:33.11:0,33,736	0/0:18,0:18:38.50:0,39,938	0/0:21,0:21:51:0,51,968	0/0:26,0:26:78.27:0,78,1709	0/0:28,0:28:81.28:0,81,1802	0/0:11,0:11:33.10:0,33,643	0/0:32,0:32:87.29:0,87,1823	0/0:19,0:19:51.17:0,51,1137	0/0:23,0:23:69.23:0,69,1471	0/0:22,0:22:63.21:0,63,1365	0/0:27,0:27:81.28:0,81,1806	0/0:26,0:26:75.26:0,75,1620	0/0:20,0:20:60.21:0,60,1313	0/0:30,0:30:84.29:0,84,1855	0/0:24,0:24:72.25:0,72,1604	0/0:18,0:18:51.13:0,51,1021	1/1:2,8:10:27.09:871,27,0	0/0:24,0:24:72.25:0,72,1595	0/0:31,0:31:93.31:0,93,2029	0/0:15,0:15:45.15:0,45,1000	0/0:12,0:12:36.12:0,36,787	0/0:22,0:22:66.23:0,66,1468	0/0:19,0:19:57.20:0,57,1249	0/0:25,0:25:75.26:0,75,1657	0/0:14,0:14:36.12:0,36,788	0/0:23,0:22:63.21:0,63,1380	0/0:6,0:6:18.06:0,18,401
chr10	101544333	.	CT	C	2837.39	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=4.538;DP=536;FS=0.000;HRun=9;HaplotypeScore=66.7447;InbreedingCoeff=0.9965;MQ=76.83;MQ0=1;MQRankSum=-1.625;QD=18.79;ReadPosRankSum=3.123;VQSLOD=3.9387;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:63.02:577,63,0	1/1:1,8:9:21.01:192,21,0	0/0:18,0:15:23.94:0,24,213	0/0:15,0:14:21.45:0,21,289	1/1:3,22:25:60.01:548,60,0	0/0:21,0:21:63.19:0,63,727	0/0:23,0:23:63.19:0,63,727	0/0:25,0:25:48.11:0,48,528	0/0:21,0:21:48.13:0,48,546	0/0:23,0:23:66.20:0,66,761	0/0:19,0:19:51.15:0,51,588	1/1:0,16:16:48.03:439,48,0	1/1:1,16:17:39.02:355,39,0	1/1:5,20:25:60.03:549,60,0	0/0:15,0:15:42.12:0,42,485	1/1:1,14:15:33.02:302,33,0	0/0:15,0:15:36.11:0,36,415	1/1:1,0:19:28.30:83,28,0	0/0:21,1:22:26.67:0,27,543	0/0:27,1:28:47.75:0,48,804	0/0:8,0:8:24.06:0,24,266	0/0:22,1:23:29.70:0,30,595	0/0:16,0:16:36.08:0,36,397	0/0:8,0:8:21.05:0,21,233	0/0:18,0:18:45.13:0,45,512	0/0:22,0:23:60.01:0,60,672	0/0:35,0:35:65.85:0,66,1011	0/0:9,0:9:24.07:0,24,277
chr10	101545134	.	GA	G	128.53	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.130;DP=494;FS=6.478;HRun=1;HaplotypeScore=59.7375;InbreedingCoeff=0.9319;MQ=79.47;MQ0=0;MQRankSum=-3.667;QD=14.28;ReadPosRankSum=0.433;VQSLOD=2.6507;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.24:0,69,1096	0/0:3,0:3:9.03:0,9,144	0/0:11,0:11:30.09:0,30,441	0/0:19,0:19:57.09:0,57,835	0/0:16,0:16:48.15:0,48,740	0/0:21,0:21:63.20:0,63,984	0/0:19,0:19:57.18:0,57,885	0/0:34,0:34:99:0,102,1600	0/0:14,0:14:42.14:0,42,671	0/0:16,0:16:48.16:0,48,767	0/0:13,0:13:39.13:0,39,623	0/0:20,0:20:60.17:0,60,901	0/0:21,0:21:63.21:0,63,1007	0/0:15,0:15:45.14:0,45,687	0/0:27,0:27:81.28:0,81,1285	0/0:21,0:21:63.20:0,63,973	0/0:19,0:19:54.11:0,54,809	1/1:1,8:9:18.53:219,19,0	0/0:24,0:24:69.23:0,69,1091	0/0:15,0:15:45.15:0,45,707	0/0:7,0:7:21.07:0,21,336	0/0:13,0:13:39.13:0,39,617	0/0:13,0:13:39.13:0,39,623	0/0:25,0:25:75.26:0,75,1188	0/0:12,0:12:36.12:0,36,574	0/0:23,0:23:69.24:0,69,1104	0/0:29,0:29:84.29:0,84,1340	0/0:8,0:8:24.08:0,24,375
chr10	101545398	.	C	CTTA	233.99	PASS	AC=10;AF=0.263;AN=38;BaseQRankSum=-2.251;DP=260;FS=3.685;HRun=0;HaplotypeScore=61.3125;InbreedingCoeff=0.5825;MQ=64.16;MQ0=1;MQRankSum=0.837;QD=7.55;ReadPosRankSum=-0.859;VQSLOD=1.9442;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,3:7:7.84:120,8,0	1/1:0,2:2:6.02:115,6,0	./.	./.	0/0:13,0:14:9:0,9,100	0/0:11,0:11:15.05:0,15,197	0/0:6,0:6:6.02:0,6,79	./.	0/0:7,0:7:3.01:0,3,39	1/1:7,0:7:0.89:2,1,0	1/1:7,1:8:3.01:57,3,0	0/0:6,0:8:5.95:0,6,42	0/0:11,0:11:9.03:0,9,118	1/1:7,0:7:3.01:57,3,0	0/0:15,0:15:8.93:0,9,63	./.	0/0:16,0:16:27.09:0,27,355	./.	0/0:11,0:11:5.95:0,6,42	0/0:20,0:20:8.93:0,9,63	./.	./.	./.	./.	0/0:8,0:8:12.04:0,12,158	0/0:17,0:17:20.83:0,21,147	0/0:22,0:22:17.86:0,18,126	0/0:13,0:13:5.95:0,6,42
chr10	101545421	.	TATTATTATTATTATTA	T	4505.23	PASS	AB=1.000;AC=17;AF=0.340;AN=50;BaseQRankSum=6.929;DP=167;FS=0.648;HRun=0;HaplotypeScore=81.4388;InbreedingCoeff=0.7084;MQ=55.82;MQ0=1;MQRankSum=-3.181;QD=46.45;ReadPosRankSum=-1.506;VQSLOD=3.6348;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:7:17.65:0,18,631	0/0:2,0:2:6.02:0,6,446	0/0:1,0:1:2.22:0,2,7	0/0:1,0:1:3.01:0,3,48	0/0:6,0:6:18.05:0,18,765	0/0:7,0:7:21.07:0,21,1396	0/0:4,0:4:12.04:0,12,654	1/1:21,0:20:60.01:646,60,0	0/0:2,0:2:6.02:0,6,485	0/0:3,0:3:9.02:0,9,239	0/0:3,0:3:9.02:0,9,399	0/0:2,0:2:6.02:0,6,328	0/0:7,0:7:21.07:0,21,1533	0/0:3,0:3:9.03:0,9,588	1/1:0,9:9:9.03:430,9,0	0/0:2,0:2:6.02:0,6,85	0/0:12,0:12:36.12:0,36,2615	0/1:5,0:5:11.08:11,0,78	1/1:0,5:5:14.96:354,15,0	1/1:0,14:14:27.06:643,27,0	1/1:3,0:3:6.02:77,6,0	./.	./.	./.	0/0:7,0:7:21.07:0,21,1212	1/1:0,15:15:39.06:1199,39,0	1/1:0,20:20:17.88:859,18,0	1/1:0,5:5:6.02:287,6,0
chr10	101545436	.	TA	T	1485.01	PASS	AC=18;AF=0.333;AN=54;BaseQRankSum=9.175;DP=194;FS=20.333;HRun=1;HaplotypeScore=45.9804;InbreedingCoeff=0.7782;MQ=57.78;MQ0=2;MQRankSum=-4.054;QD=15.15;ReadPosRankSum=2.302;VQSLOD=1.8193;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:6:11.70:0,12,128	0/0:2,0:2:6.01:0,6,59	0/0:2,0:2:5.05:0,5,49	0/0:1,0:1:3.01:0,3,43	0/0:10,0:10:28.62:0,29,363	0/0:9,0:9:27.09:0,27,409	0/0:2,0:2:6.02:0,6,96	1/1:1,21:21:63.16:767,63,0	0/0:5,0:5:15.02:0,15,188	0/0:4,0:4:12.01:0,12,135	0/0:3,0:2:6.01:0,6,72	0/0:4,0:4:9.12:0,9,77	0/0:9,0:9:27.07:0,27,397	0/0:7,0:7:21.04:0,21,256	1/1:9,0:9:8.83:53,9,0	0/0:6,0:6:18.05:0,18,240	0/0:14,0:14:42.12:0,42,629	1/1:4,0:3:5.96:43,6,0	1/1:5,0:5:5.88:35,6,0	1/1:14,0:14:23.87:245,24,0	1/1:0,4:4:9.03:115,9,0	0/0:4,0:4:12.04:0,12,171	0/0:1,0:1:3.01:0,3,43	./.	0/0:6,0:6:18.06:0,18,277	1/1:15,0:15:32.60:276,33,0	1/1:20,0:20:17.57:105,18,0	1/1:5,0:5:5.88:35,6,0
chr10	101545671	.	A	AT	4148.64	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=4.075;DP=574;FS=5.956;HRun=9;HaplotypeScore=59.1477;InbreedingCoeff=0.9899;MQ=73.17;MQ0=0;MQRankSum=0.480;QD=27.66;ReadPosRankSum=2.010;VQSLOD=3.8410;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:36.10:398,36,0	1/1:0,7:7:18.05:199,18,0	0/0:10,0:10:23.47:0,23,189	0/0:10,0:10:10.89:0,11,102	1/1:1,18:20:56.90:585,57,0	0/0:22,0:22:62.97:0,63,543	0/0:18,0:18:47.98:0,48,417	0/0:27,0:27:68.98:0,69,599	0/0:24,0:24:68.98:0,69,599	0/0:16,0:16:47.99:0,48,417	0/0:15,0:15:32.98:0,33,286	1/1:3,14:17:36.10:398,36,0	1/1:3,24:27:66.18:730,66,0	1/1:3,28:31:81.19:884,81,0	0/0:37,0:37:99:0,102,885	1/1:2,32:34:87.22:955,87,0	0/0:15,0:15:35.97:0,36,312	0/0:14,0:14:35.99:0,36,312	0/0:19,0:19:41.96:0,42,359	0/0:26,0:26:71.97:0,72,621	0/0:14,0:14:41.99:0,42,365	0/0:15,0:15:35.99:0,36,312	0/0:24,0:24:65.98:0,66,573	0/0:18,1:19:20.78:0,21,406	0/0:12,0:12:29.98:0,30,260	0/0:27,0:27:68.93:0,69,592	0/0:44,0:44:99:0,114,989	0/0:15,1:16:44.98:0,45,391
chr10	101546201	.	AAC	A	5761.92	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.087;DP=736;FS=0.000;HRun=0;HaplotypeScore=96.2480;InbreedingCoeff=0.9114;MQ=66.26;MQ0=9;MQRankSum=-0.072;QD=25.05;ReadPosRankSum=-1.761;VQSLOD=5.2261;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:29:35.48:0,35,300	0/0:2,0:7:15:0,15,132	0/0:36,1:21:0.27:0,0,467	0/0:28,0:15:10.24:0,10,215	0/0:31,0:31:63.20:0,63,985	0/0:22,0:22:57.19:0,57,920	0/0:15,1:16:2.46:0,2,533	1/1:11,32:43:93.25:1108,93,0	0/0:22,0:22:51.15:0,51,784	0/0:38,0:38:99:0,99,1513	0/0:26,1:26:33.04:0,33,1026	0/0:30,0:30:48.20:0,48,1247	0/0:28,1:29:32.41:0,32,959	0/0:26,0:26:38.61:0,39,915	1/1:6,29:35:69.22:843,69,0	0/0:3,0:29:56.97:0,57,497	0/0:20,0:20:45.15:0,45,730	0/0:8,0:7:11.49:0,11,83	1/1:10,9:19:27.08:329,27,0	1/1:4,20:25:60.02:711,60,0	1/1:10,17:26:39.12:477,39,0	0/0:29,0:28:44.72:0,45,1180	0/0:23,0:23:57.19:0,57,920	0/0:25,1:25:17.51:0,18,787	0/0:25,0:25:66.21:0,66,1041	1/1:3,28:32:87.06:1033,87,0	1/1:6,24:31:62.92:747,63,0	1/1:2,15:17:42.13:513,42,0
chr10	101546219	.	C	CA	412.65	PASS	AB=0.980;AC=5;AF=0.089;AN=56;BaseQRankSum=7.467;DP=740;FS=7.941;HRun=1;HaplotypeScore=103.3885;InbreedingCoeff=0.3429;MQ=62.59;MQ0=12;MQRankSum=-2.496;QD=5.09;ReadPosRankSum=2.102;VQSLOD=0.3914;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,2:28:18.91:209,0,19	0/1:8,0:8:14.91:15,0,64	0/0:47,0:22:61.19:0,61,708	0/0:36,0:21:56.91:0,57,672	0/0:26,0:26:78.26:0,78,1071	0/0:21,0:21:60.20:0,60,836	0/0:12,0:12:36.07:0,36,477	0/0:50,0:50:99:0,130,1167	0/0:20,0:20:57.19:0,57,786	0/0:32,0:32:93.31:0,93,1288	0/0:27,0:26:43.70:0,44,1000	0/0:31,0:31:88.84:0,89,1210	0/0:24,0:25:75.07:0,75,967	0/0:30,0:29:87.29:0,87,1184	0/0:30,0:30:70.98:0,71,467	0/1:28,0:28:60.38:60,0,89	0/0:18,2:20:51.16:0,51,693	1/1:4,10:11:17.69:250,18,0	0/0:17,0:16:40.15:0,40,366	0/0:24,0:24:71.16:0,71,544	0/0:21,0:20:47.46:0,47,370	0/0:32,0:32:94.75:0,95,1233	0/0:25,0:25:72.24:0,72,995	0/0:21,0:20:53.96:0,54,727	0/0:26,0:26:78.21:0,78,1043	0/0:33,0:33:93.60:0,94,681	0/0:35,0:35:92.05:0,92,801	0/0:17,0:17:47.37:0,47,347
chr10	101546532	.	C	CA	1979.77	PASS	AB=0.952;AC=17;AF=0.304;AN=56;BaseQRankSum=1.177;DP=514;FS=12.725;HRun=11;HaplotypeScore=56.7700;InbreedingCoeff=0.7353;MQ=71.18;MQ0=0;MQRankSum=0.142;QD=11.25;ReadPosRankSum=-1.357;VQSLOD=1.1300;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,2:26:54.30:303,54,0	1/1:1,1:7:17.21:102,17,0	0/1:12,0:13:20.69:21,0,96	0/0:9,0:8:8.92:0,9,65	1/1:7,18:26:13.48:486,13,0	0/0:24,0:25:67.76:0,68,515	0/0:7,0:7:20.92:0,21,162	0/0:28,0:28:68.71:0,69,534	0/0:12,0:12:32.87:0,33,255	0/0:17,0:19:48.88:0,49,360	0/0:24,0:24:58.79:0,59,447	1/1:1,9:10:24.05:244,24,0	1/1:2,15:17:36.07:363,36,0	1/1:1,17:20:44.70:424,45,0	0/0:27,0:29:56.45:0,56,567	1/1:4,1:18:37.22:208,37,0	0/0:16,0:17:35.33:0,35,259	0/0:11,0:11:26.89:0,27,209	0/1:17,1:19:20:20,0,220	0/0:21,1:22:32.30:0,32,434	0/0:6,0:6:14.94:0,15,116	0/1:17,2:19:10.08:10,0,297	0/0:19,0:20:46.84:0,47,354	0/0:9,0:9:17.91:0,18,139	0/0:22,1:24:25.36:0,25,370	0/0:27,1:28:47.21:0,47,546	0/0:32,1:33:47.19:0,47,545	0/0:14,0:14:35.83:0,36,278
chr10	101549240	.	G	GT	2897.67	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-10.015;DP=572;FS=1.965;HRun=7;HaplotypeScore=52.0086;InbreedingCoeff=0.9898;MQ=78.70;MQ0=0;MQRankSum=0.819;QD=30.50;ReadPosRankSum=2.952;VQSLOD=3.9676;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.05:0,42,400	0/0:5,0:5:15.02:0,15,145	0/0:19,0:20:21.87:0,22,302	0/0:13,0:12:26.40:0,26,236	1/1:1,18:20:53.67:630,54,0	0/0:29,0:29:84.13:0,84,811	0/0:18,0:18:51.08:0,51,492	0/0:29,0:29:75.10:0,75,719	0/0:25,0:25:66.10:0,66,637	0/0:26,0:26:63.10:0,63,608	0/0:21,0:21:57.09:0,57,550	1/1:0,24:24:72.22:870,72,0	1/1:2,25:27:72.22:870,72,0	1/1:4,20:24:57.17:689,57,0	0/0:22,0:21:51.05:0,51,482	0/0:20,0:20:57.08:0,57,545	0/0:30,0:30:87.14:0,87,840	0/0:15,0:15:42.07:0,42,405	0/0:18,0:18:48.07:0,48,464	0/0:32,0:32:87.13:0,87,840	0/0:5,0:5:15.02:0,15,145	0/0:23,0:23:66.09:0,66,633	0/0:20,0:20:45.07:0,45,435	0/0:16,0:16:42.03:0,42,398	0/0:19,0:19:48.07:0,48,464	0/0:26,0:26:60.09:0,60,580	0/0:17,0:16:48.08:0,48,463	0/0:12,0:12:36.06:0,36,348
chr10	101549912	.	GTC	G	3532.43	PASS	AB=0.969;AC=40;AF=0.741;AN=54;BaseQRankSum=7.548;DP=499;FS=1.434;HRun=0;HaplotypeScore=96.4587;InbreedingCoeff=0.0418;MQ=49.85;MQ0=35;MQRankSum=0.753;QD=7.58;ReadPosRankSum=-3.414;VQSLOD=2.4688;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:31:51.75:321,52,0	1/1:10,0:10:22.40:123,22,0	./.	0/0:10,0:2:5.72:0,6,29	1/1:1,14:15:2.59:26,3,0	0/0:22,0:22:2.46:0,2,236	0/1:20,0:16:42.95:43,0,53	1/1:8,0:6:17.78:121,18,0	0/1:12,0:11:44.27:44,0,109	0/1:17,0:16:8.73:9,0,174	0/1:5,4:7:4.99:5,0,63	1/1:15,0:14:32.90:262,33,0	1/1:2,17:18:5.81:90,6,0	1/1:21,0:20:29.70:234,30,0	0/1:17,0:16:0.20:0,0,226	1/1:25,0:23:5.09:192,5,0	0/1:27,0:23:24.95:25,0,292	1/1:17,0:16:44.59:321,45,0	1/1:3,11:11:32.84:259,33,0	1/1:18,0:18:44.48:351,44,0	1/1:21,0:18:27.51:220,28,0	0/1:17,0:17:72.13:72,0,87	0/1:24,0:23:26.88:27,0,114	0/1:39,0:36:9.96:10,0,359	0/1:24,0:23:58.69:59,0,132	1/1:24,0:21:32.53:341,33,0	1/1:12,0:12:32.82:248,33,0	1/1:8,0:7:17.86:131,18,0
chr10	101549937	.	TG	T	191.01	PASS	AB=0.817;AC=3;AF=0.054;AN=56;BaseQRankSum=6.129;DP=486;FS=2.744;HRun=1;HaplotypeScore=88.8771;InbreedingCoeff=0.1785;MQ=55.14;MQ0=31;MQRankSum=-0.214;QD=3.08;ReadPosRankSum=2.556;VQSLOD=0.2325;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,2:31:95.61:137,0,96	0/1:7,3:10:1.20:60,0,1	0/0:17,0:9:24.92:0,25,286	0/0:19,0:9:23.91:0,24,283	0/0:14,0:14:17.97:0,18,200	0/0:24,0:24:54.02:0,54,819	0/0:17,0:14:28.02:0,28,348	0/0:13,0:12:32.66:0,33,155	0/0:15,0:15:38.98:0,39,498	0/0:22,0:20:54.62:0,55,736	0/0:9,0:6:15.05:0,15,209	0/0:12,0:11:27.09:0,27,348	0/0:16,0:15:11.79:0,12,93	0/0:11,0:10:21.05:0,21,251	0/0:13,0:12:36.11:0,36,519	0/1:13,7:19:60.04:95,0,60	0/0:28,0:25:61.97:0,62,851	0/0:15,0:14:39.58:0,40,477	0/0:12,0:11:31.10:0,31,175	0/0:26,0:26:62.83:0,63,305	0/0:13,0:11:17.78:0,18,86	0/0:16,0:16:42.14:0,42,574	0/0:22,0:22:42:0,42,581	0/0:31,0:29:61.24:0,61,863	0/0:23,0:22:43.94:0,44,593	0/0:23,0:21:53.28:0,53,276	0/0:9,0:9:22.32:0,22,112	0/0:4,0:4:8.48:0,8,44
chr10	101550109	.	AGTT	A	504.98	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.634;DP=638;FS=2.473;HRun=0;HaplotypeScore=85.9314;InbreedingCoeff=0.9986;MQ=76.37;MQ0=0;MQRankSum=-2.145;QD=31.56;ReadPosRankSum=1.362;VQSLOD=3.6266;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.20:0,57,1292	0/0:12,0:12:36.12:0,36,815	0/0:13,0:13:36.10:0,36,738	0/0:13,1:14:34.36:0,34,681	0/0:25,0:25:75.26:0,75,1698	0/0:25,0:25:75.26:0,75,1668	0/0:11,0:11:33.11:0,33,748	0/0:35,0:35:99:0,102,2270	0/0:26,0:26:78.27:0,78,1749	0/0:37,0:36:99:0,111,2461	0/0:24,0:24:72.25:0,72,1631	0/0:18,0:18:54.19:0,54,1222	0/0:21,0:21:60.21:0,60,1318	0/0:22,0:22:66.23:0,66,1470	0/0:20,0:20:60.21:0,60,1360	0/0:22,0:22:66.23:0,66,1496	0/0:16,0:16:48.16:0,48,1088	1/1:0,16:16:36.12:600,36,0	0/0:23,0:23:66.15:0,66,1407	0/0:35,0:35:99:0,102,2274	0/0:14,0:14:42.14:0,42,950	0/0:38,0:38:99:0,114,2567	0/0:30,0:30:90.31:0,90,2039	0/0:20,0:20:51.18:0,51,1156	0/0:23,0:23:69.24:0,69,1564	0/0:31,0:31:93.32:0,93,2108	0/0:36,0:36:99:0,108,2416	0/0:11,0:11:30.04:0,30,541
chr10	101551779	.	T	TG	489.72	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.147;DP=692;FS=1.050;HRun=1;HaplotypeScore=69.6377;InbreedingCoeff=0.9991;MQ=85.50;MQ0=0;MQRankSum=-3.017;QD=30.61;ReadPosRankSum=2.467;VQSLOD=3.4567;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1543	0/0:11,0:11:33.11:0,33,427	0/0:30,0:30:87.24:0,87,1074	0/0:25,0:25:69.13:0,69,831	0/0:27,0:27:81.26:0,81,1046	0/0:28,0:28:81.26:0,81,1051	0/0:24,0:24:72.23:0,72,935	0/0:36,0:36:99:0,105,1349	0/0:18,0:18:51.14:0,51,645	0/0:25,0:24:75.24:0,75,974	0/0:31,0:31:90.27:0,90,1141	0/0:24,0:24:69.21:0,69,882	0/0:30,0:30:90.29:0,90,1167	0/0:25,0:25:75.24:0,75,973	0/0:15,0:15:45.15:0,45,584	0/0:25,0:25:75.24:0,75,974	0/0:27,0:27:81.26:0,81,1051	1/1:0,16:16:39.13:585,39,0	0/0:14,0:14:39.13:0,39,506	0/0:26,0:26:75.24:0,75,973	0/0:38,0:38:99:0,105,1363	0/0:25,0:25:72.23:0,72,935	0/0:29,0:29:87.28:0,87,1129	0/0:12,0:12:30.10:0,30,390	0/0:32,0:32:96.31:0,96,1246	0/0:22,0:22:66.21:0,66,857	0/0:20,0:20:60.18:0,60,764	0/0:16,0:16:48.16:0,48,623
chr10	101552134	.	C	CT	9165.53	PASS	AB=0.667;AC=27;AF=0.482;AN=56;BaseQRankSum=-14.525;DP=703;FS=6.827;HRun=10;HaplotypeScore=67.4738;InbreedingCoeff=0.9280;MQ=69.21;MQ0=0;MQRankSum=-1.318;QD=24.06;ReadPosRankSum=-1.854;VQSLOD=4.8865;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:5,31:36:87.07:899,87,0	1/1:3,8:11:24.06:256,24,0	0/0:12,0:11:22.97:0,23,176	0/0:11,0:10:23.94:0,24,197	1/1:3,26:30:81.08:827,81,0	0/0:23,0:23:59.91:0,60,493	0/0:14,0:14:41.95:0,42,345	1/1:9,28:38:59.53:825,60,0	0/0:32,0:32:92.88:0,93,763	0/0:38,1:40:85.89:0,86,693	0/0:27,0:27:62.87:0,63,514	1/1:3,22:25:60.15:640,60,0	1/1:4,20:24:32.50:551,32,0	1/1:3,23:26:63.15:665,63,0	0/0:35,0:35:89.87:0,90,739	1/1:5,17:23:26.32:470,26,0	0/0:27,0:29:57.98:0,58,455	0/0:0,0:5:10.19:0,10,29	1/1:8,26:33:59.39:815,59,0	1/1:3,25:28:56.55:801,57,0	1/1:3,20:23:57.14:608,57,0	0/0:27,0:27:68.13:0,68,549	0/0:15,1:16:25.43:0,25,325	0/0:20,0:20:41.93:0,42,345	0/0:30,0:30:83.90:0,84,689	1/1:2,23:27:75.02:770,75,0	1/1:5,35:40:87.22:927,87,0	0/1:8,8:16:9.61:113,0,10
chr10	101552365	.	AT	A	2670.97	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.699;DP=669;FS=3.383;HRun=9;HaplotypeScore=76.8275;InbreedingCoeff=0.9996;MQ=75.29;MQ0=0;MQRankSum=-0.369;QD=22.64;ReadPosRankSum=2.004;VQSLOD=4.6464;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:39:99:0,114,1231	0/0:12,0:12:36.11:0,36,415	0/0:18,1:22:31.11:0,31,349	0/0:21,0:21:28.30:0,28,320	1/1:0,21:21:63.03:576,63,0	0/0:15,0:15:42.10:0,42,467	0/0:29,0:29:75.16:0,75,832	0/0:27,0:29:69.01:0,69,763	0/0:18,0:18:51.15:0,51,589	0/0:21,0:21:57.17:0,57,658	0/0:19,0:19:54.16:0,54,623	1/1:3,15:18:36.02:330,36,0	1/1:2,22:24:65.98:596,66,0	1/1:0,19:19:54.03:494,54,0	0/0:35,0:35:99:0,99,1129	0/0:24,0:24:64.43:0,64,730	0/0:27,0:26:75.19:0,75,851	1/1:2,34:36:93.05:851,93,0	0/0:24,0:24:66.16:0,66,741	0/0:34,1:35:65.78:0,66,997	0/0:19,0:19:51.14:0,51,578	0/0:17,0:17:48.14:0,48,554	0/0:17,0:17:51.14:0,51,580	0/0:21,0:21:57.16:0,57,649	0/0:23,0:23:66.18:0,66,752	0/0:28,1:29:50.76:0,51,838	0/0:40,0:40:99:0,105,1203	0/0:15,0:15:42.08:0,42,461
chr10	101553092	.	G	GA	6615.24	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-14.782;DP=685;FS=3.196;HRun=6;HaplotypeScore=63.2052;InbreedingCoeff=0.9988;MQ=76.04;MQ0=0;MQRankSum=0.008;QD=33.75;ReadPosRankSum=0.031;VQSLOD=4.7479;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,983	0/0:8,0:8:24.05:0,24,243	0/0:22,0:22:54.09:0,54,536	0/0:16,0:16:32.99:0,33,314	0/0:33,0:33:90.18:0,90,909	0/0:30,0:30:87.18:0,87,880	0/0:21,0:21:54.09:0,54,537	1/1:5,26:31:78.24:967,78,0	0/0:19,0:19:57.10:0,57,567	0/0:23,0:23:69.15:0,69,699	0/0:27,0:27:81.18:0,81,826	0/0:21,0:21:60.14:0,60,611	0/0:25,0:25:69.02:0,69,687	0/0:21,0:21:54.12:0,54,551	0/0:27,0:27:78.18:0,78,796	0/0:23,0:23:63.13:0,63,636	0/0:19,0:19:54.12:0,54,551	0/0:18,0:18:54.06:0,54,532	1/1:0,11:11:33.08:391,33,0	1/1:3,43:46:99:1639,132,0	1/1:2,16:18:54.17:667,54,0	0/0:26,0:26:69.15:0,69,704	0/0:22,0:22:63.14:0,63,643	0/0:26,0:26:69.11:0,69,689	0/0:28,0:28:81.12:0,81,798	1/1:4,41:45:92.78:1479,93,0	1/1:2,35:37:96.31:1208,96,0	1/1:0,8:8:21.07:264,21,0
chr10	101554347	.	C	CTT	693.07	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.808;DP=557;FS=0.000;HRun=7;HaplotypeScore=62.4345;InbreedingCoeff=0.8951;MQ=72.95;MQ0=1;MQRankSum=0.096;QD=34.65;ReadPosRankSum=1.201;VQSLOD=3.4174;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:63.17:0,63,734	0/0:12,0:12:33.09:0,33,385	0/0:16,0:16:42.01:0,42,468	0/0:11,0:10:17.95:0,18,195	0/0:32,0:32:84.21:0,84,958	0/0:22,0:22:57.16:0,57,664	0/0:8,0:8:24.06:0,24,269	0/0:26,0:26:72.20:0,72,829	0/0:20,0:20:57.16:0,57,664	0/0:19,0:19:45.12:0,45,524	0/0:28,0:28:75.21:0,75,874	0/0:21,0:21:54.15:0,54,629	0/0:18,0:19:50.88:0,51,571	0/0:17,0:17:48.13:0,48,549	0/0:30,0:30:84.25:0,84,979	0/0:18,0:18:54.15:0,54,619	0/0:17,0:16:39.11:0,39,454	1/1:3,17:20:48.16:788,48,0	0/0:23,0:23:57.15:0,57,655	0/0:28,0:28:75.22:0,75,873	0/0:15,0:15:33.09:0,33,385	0/0:12,0:12:27.06:0,27,304	0/0:23,0:23:63.17:0,63,723	0/0:10,0:10:30.09:0,30,349	0/0:28,0:28:78.23:0,78,909	0/0:20,0:20:51.14:0,51,594	0/0:34,0:34:99:0,99,1132	0/0:2,0:2:6.02:0,6,70
chr10	101554945	.	GT	G	4796.45	PASS	AB=0.900;AC=31;AF=0.554;AN=56;BaseQRankSum=12.490;DP=576;FS=0.000;HRun=10;HaplotypeScore=72.1895;InbreedingCoeff=0.9279;MQ=73.35;MQ0=0;MQRankSum=-1.164;QD=13.86;ReadPosRankSum=1.270;VQSLOD=4.9333;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:44.92:383,45,0	1/1:1,8:9:20.99:182,21,0	0/0:18,0:17:25.81:0,26,291	0/0:17,0:14:22.26:0,22,179	1/1:2,0:31:48.88:145,49,0	0/0:26,0:27:71.97:0,72,755	0/0:11,0:11:27.04:0,27,281	1/1:7,22:29:32.77:504,33,0	0/0:14,0:15:38.94:0,39,412	0/0:27,0:27:63.17:0,63,697	0/0:21,0:22:56.99:0,57,611	1/1:3,0:23:35.87:105,36,0	1/1:0,0:19:28.52:84,29,0	1/1:2,0:25:40.13:119,40,0	0/0:19,0:19:57.14:0,57,622	1/1:1,16:17:44.98:391,45,0	0/1:16,2:18:3.96:4,0,408	1/1:1,0:15:28.52:84,29,0	1/1:2,13:15:38.95:330,39,0	1/1:3,36:39:99:878,102,0	1/1:4,8:12:20.99:182,21,0	0/0:16,0:16:45.11:0,45,491	0/0:20,2:22:5.04:0,5,501	0/0:14,0:14:36.10:0,36,398	0/0:22,0:22:60.15:0,60,657	1/1:5,20:25:59.98:521,60,0	1/1:8,29:37:83.96:729,84,0	1/1:4,9:13:17.98:156,18,0
chr10	101556131	.	T	TGCCCCCAAACTTTGCTATTTAAACA	27479.60	PASS	AB=0.659;AC=50;AF=0.962;AN=52;BaseQRankSum=0.486;DP=168;FS=36.492;HRun=0;HaplotypeScore=185.4301;InbreedingCoeff=-0.0784;MQ=92.43;MQ0=0;MQRankSum=-3.145;QD=164.55;ReadPosRankSum=3.030;VQSLOD=3.1983;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,0:3:9.03:860,9,0	0/1:5,0:8:70.61:906,0,71	0/1:4,1:12:5.12:1224,0,5	1/1:6,0:6:15.05:1230,15,0	1/1:8,0:8:21:1562,21,0	1/1:5,0:5:15.05:1269,15,0	1/1:9,0:9:27.09:1132,27,0	1/1:4,0:4:9.03:464,9,0	1/1:10,0:10:27.08:1230,27,0	1/1:10,0:10:27.05:2091,27,0	1/1:10,0:10:24.08:2253,24,0	1/1:6,0:6:15.05:900,15,0	1/1:8,0:8:15.05:853,15,0	1/1:3,0:3:9.03:760,9,0	1/1:4,0:4:12.04:812,12,0	1/1:7,0:7:12.04:1185,12,0	./.	1/1:7,0:7:18.05:1281,18,0	1/1:3,0:2:6.02:621,6,0	1/1:2,0:2:3.01:307,3,0	1/1:4,0:4:9.03:467,9,0	1/1:11,0:11:24.08:2159,24,0	1/1:1,0:1:3.01:288,3,0	1/1:6,0:5:11.97:490,12,0	1/1:8,0:8:15.05:1090,15,0	1/1:10,0:10:24.08:1931,24,0	1/1:1,0:1:3.01:115,3,0
chr10	101557558	.	A	ATGT	59.81	PASS	AB=0.817;AC=3;AF=0.136;AN=22;BaseQRankSum=1.875;DP=360;FS=0.000;HRun=0;HaplotypeScore=65.3461;InbreedingCoeff=0.2216;MQ=16.10;MQ0=217;MQRankSum=0.099;QD=0.95;ReadPosRankSum=1.678;VQSLOD=1.3439;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	0/0:26,0:8:0.47:0,0,1	./.	0/0:28,0:9:0:0,0,0	0/1:37,2:5:99:126,0,116	0/1:16,2:7:0.08:0,0,0	./.	./.	./.	0/0:31,0:10:5.95:0,6,111	./.	0/0:22,1:6:6.49:0,6,112	./.	./.	./.	0/1:2,4:4:0.02:0,0,0	0/0:28,0:14:9.03:0,9,138	0/0:20,0:8:3.01:0,3,56	0/0:29,1:15:0.79:0,1,1	0/0:22,0:7:0:0,0,1	./.	./.	./.
chr10	101557569	.	CACAGAG	C	149.95	PASS	AB=0.926;AC=6;AF=0.200;AN=30;BaseQRankSum=2.942;DP=462;FS=0.000;HRun=0;HaplotypeScore=66.7658;InbreedingCoeff=-0.0158;MQ=17.15;MQ0=272;MQRankSum=-0.728;QD=0.99;ReadPosRankSum=0.204;VQSLOD=1.2855;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:5,0:4:2.04:0,2,6	./.	./.	./.	0/0:17,0:5:3.01:0,3,50	1/1:34,0:11:0.47:1,0,0	./.	0/0:34,0:11:2.50:0,3,52	0/1:46,2:7:99:106,0,212	0/0:21,2:7:0:0,0,0	./.	./.	./.	0/0:41,0:13:5.91:0,6,172	0/0:4,0:3:2.04:0,2,6	0/1:26,1:7:10.96:11,0,84	./.	0/0:8,0:1:0:0,0,0	./.	0/1:5,2:5:0:0,0,0	0/1:35,0:18:61.56:113,0,62	0/0:27,0:11:5.89:0,6,137	0/0:38,2:20:1.52:0,2,24	0/0:26,0:9:3.01:0,3,76	./.	./.	./.
chr10	101557653	.	A	ATGT	863.13	PASS	AB=0.591;AC=13;AF=0.260;AN=50;BaseQRankSum=5.809;DP=610;FS=12.090;HRun=0;HaplotypeScore=134.3776;InbreedingCoeff=0.6616;MQ=33.35;MQ0=81;MQRankSum=-5.578;QD=13.92;ReadPosRankSum=1.055;VQSLOD=3.0393;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,1:12:0.88:2,1,0	./.	0/0:34,0:4:6.02:0,6,94	0/0:50,0:4:9.50:0,9,137	./.	0/0:29,0:23:15.05:0,15,279	0/0:39,0:32:60:0,60,1101	1/1:4,2:2:3.01:62,3,0	0/0:35,0:28:27.09:0,27,503	0/0:50,0:38:99:0,105,1881	0/0:31,0:23:32.92:0,33,585	1/1:8,1:9:1.19:41,1,0	0/0:2,0:2:0:0,0,0	0/0:5,0:5:0.58:0,1,1	0/0:44,0:34:36.50:0,37,671	0/0:8,1:8:1.26:0,1,4	0/0:41,0:30:48.64:0,49,895	0/0:0,1:1:0.47:0,0,1	1/1:3,1:2:5.98:88,6,0	0/1:4,9:12:0.05:0,0,0	./.	0/0:47,0:41:47.15:0,47,863	0/0:34,0:29:34:0,34,616	0/0:55,0:46:69.24:0,69,1263	0/0:31,0:25:30.06:0,30,556	1/1:1,9:9:24.08:516,24,0	1/1:2,5:6:18:290,18,0	0/0:0,1:1:0:0,0,0
chr10	101557655	.	A	ATGT	800.50	PASS	AB=0.978;AC=15;AF=0.288;AN=52;BaseQRankSum=5.817;DP=612;FS=12.101;HRun=0;HaplotypeScore=131.7268;InbreedingCoeff=0.6530;MQ=33.68;MQ0=69;MQRankSum=-5.274;QD=11.77;ReadPosRankSum=1.258;VQSLOD=2.9589;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:12:0.88:2,1,0	./.	0/0:36,0:5:8.99:0,9,114	0/0:51,0:6:9.50:0,10,155	./.	0/0:27,0:24:15.05:0,15,280	0/0:40,0:33:59.79:0,60,1066	1/1:5,0:2:3.01:62,3,0	0/0:38,0:31:33.03:0,33,528	0/0:48,0:38:99:0,108,1800	0/0:31,0:23:32.93:0,33,597	1/1:2,6:9:0.68:49,1,0	0/0:0,2:2:0:0,0,0	0/0:2,4:6:0.58:0,1,1	0/0:42,0:36:36.50:0,37,668	0/0:8,1:8:1.26:0,1,4	0/0:41,0:30:49.41:0,49,883	0/1:1,0:1:0:0,0,0	1/1:4,0:2:5.99:85,6,0	0/1:13,1:13:0.06:0,0,0	0/1:4,0:1:0:0,0,0	0/0:46,0:41:47.15:0,47,821	0/0:31,0:27:34:0,34,608	0/0:55,1:47:72.20:0,72,1249	0/0:30,0:25:30.06:0,30,536	1/1:10,0:9:24.08:471,24,0	1/1:6,0:6:18.02:268,18,0	0/0:1,0:1:0:0,0,0
chr10	101557657	.	A	AG	710.37	PASS	AB=1.000;AC=16;AF=0.308;AN=52;BaseQRankSum=6.246;DP=623;FS=8.954;HRun=1;HaplotypeScore=132.8520;InbreedingCoeff=0.6221;MQ=34.22;MQ0=57;MQRankSum=-6.130;QD=5.68;ReadPosRankSum=0.329;VQSLOD=-0.0784;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:14:0.22:0,0,0	./.	0/0:34,0:5:10.38:0,10,58	0/1:53,0:6:13.90:14,0,70	./.	0/0:28,0:26:15.05:0,15,210	0/0:43,0:35:59.73:0,60,796	1/1:5,2:3:3.01:38,3,0	0/0:37,0:32:36.42:0,36,470	0/0:47,0:39:99:0,108,1243	0/0:31,0:24:32.98:0,33,434	1/1:8,2:10:3.27:42,3,0	0/0:2,0:2:1.33:0,1,4	0/0:6,0:6:4.39:0,4,11	0/0:41,0:36:36.15:0,36,480	1/1:10,0:9:2.04:6,2,0	0/0:38,0:30:49.20:0,49,600	1/1:0,1:1:2.22:7,2,0	1/1:3,2:3:8.98:112,9,0	0/0:4,11:14:5.43:0,5,14	0/0:4,0:1:0:0,0,0	0/0:45,0:41:47.87:0,48,585	0/0:32,0:28:32.85:0,33,457	0/0:55,0:47:72.01:0,72,912	0/0:30,0:26:27.06:0,27,377	1/1:4,9:12:32.84:438,33,0	1/1:4,6:9:17.28:204,17,0	0/0:0,1:1:1.25:0,1,3
chr10	101557659	.	A	AG	131.28	PASS	AB=0.987;AC=13;AF=0.250;AN=52;BaseQRankSum=4.578;DP=639;FS=2.284;HRun=0;HaplotypeScore=144.1272;InbreedingCoeff=0.1695;MQ=34.52;MQ0=57;MQRankSum=-4.097;QD=0.84;ReadPosRankSum=-1.878;VQSLOD=2.5287;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:15:0.23:0,0,0	./.	0/0:35,0:6:12.03:0,12,128	0/1:52,0:6:35.62:36,0,86	./.	0/0:29,1:26:18.04:0,18,233	0/0:39,2:34:60.13:0,60,812	0/1:9,0:5:19.27:19,0,58	0/0:37,1:33:4.66:0,5,456	0/0:46,0:38:99:0,105,1318	0/0:31,0:24:33.09:0,33,459	1/1:3,6:11:2.88:55,3,0	1/1:3,2:5:0.22:43,0,0	0/0:2,6:8:4.39:0,4,11	0/0:39,1:36:36.08:0,36,479	0/1:9,1:9:1.15:1,0,35	0/0:37,0:29:48.31:0,48,592	1/1:2,0:2:2.22:7,2,0	0/1:5,0:3:10.78:16,0,11	0/0:14,1:14:5.43:0,5,14	0/0:7,0:3:0:0,0,0	0/0:45,1:41:44.94:0,45,589	0/0:32,0:29:32.85:0,33,460	0/0:54,1:47:74.97:0,75,970	0/1:32,0:28:5.18:5,0,354	0/1:14,0:13:21.68:73,0,22	0/0:11,0:10:2.76:0,3,26	0/0:1,0:1:1.25:0,1,3
chr10	101559019	.	TATTTATTTAC	T	593.01	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.284;DP=431;FS=5.869;HRun=0;HaplotypeScore=135.7909;InbreedingCoeff=0.8324;MQ=62.47;MQ0=1;MQRankSum=-4.369;QD=65.89;ReadPosRankSum=0.248;VQSLOD=3.2305;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:45.15:0,45,2049	0/0:4,0:4:12.04:0,12,632	0/0:11,0:6:12.04:0,12,541	0/0:15,0:11:27.09:0,27,1023	0/0:35,0:35:99:0,99,4763	0/0:18,0:18:48.15:0,48,2394	0/0:13,0:13:36.12:0,36,1656	0/0:31,0:31:90.31:0,90,4494	0/0:14,0:14:39.13:0,39,2018	0/0:22,0:22:60.21:0,60,2767	0/0:9,0:9:24.08:0,24,1264	0/0:9,0:9:27.09:0,27,1265	0/0:12,0:12:30.10:0,30,1354	0/0:14,0:14:42.12:0,42,1965	0/0:12,0:12:36.12:0,36,1853	0/0:13,0:13:39.13:0,39,1997	0/0:22,0:21:63.18:0,63,2812	1/1:2,7:9:21.07:685,21,0	0/0:19,0:19:45.15:0,45,2142	0/0:19,0:19:57.18:0,57,2812	0/0:3,0:3:9.03:0,9,474	0/0:4,0:4:12.03:0,12,499	0/0:17,0:17:48.16:0,48,2330	0/0:5,0:5:12.04:0,12,619	0/0:33,0:33:99:0,99,4830	0/0:18,0:18:51.18:0,51,2590	0/0:28,0:28:72.23:0,72,3486	0/0:6,0:6:18.06:0,18,947
chr10	101559055	.	GTT	G	311.99	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.674;DP=507;FS=4.942;HRun=3;HaplotypeScore=96.2244;InbreedingCoeff=0.9508;MQ=57.96;MQ0=2;MQRankSum=-4.029;QD=28.36;ReadPosRankSum=1.385;VQSLOD=2.7614;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.22:0,63,1204	0/0:4,0:4:12.04:0,12,232	0/0:18,0:10:30:0,30,494	0/0:23,0:17:51.16:0,51,903	0/0:34,0:34:99:0,99,1891	0/0:20,0:20:60.21:0,60,1138	0/0:13,0:13:39.13:0,39,754	0/0:45,0:45:99:0,129,2384	0/0:19,0:19:54.19:0,54,1043	0/0:24,0:24:72.25:0,72,1387	0/0:13,0:13:39.12:0,39,720	0/0:13,0:13:39.13:0,39,753	0/0:12,0:12:33.11:0,33,638	0/0:18,0:18:54.19:0,54,1036	0/0:17,0:17:51.17:0,51,975	0/0:13,0:13:39.13:0,39,750	0/0:26,0:25:78.22:0,78,1469	1/1:2,9:11:27.09:406,27,0	0/0:19,0:19:54.18:0,54,990	0/0:22,0:21:63.13:0,63,1141	0/0:13,0:13:39.13:0,39,753	0/0:9,0:9:24.08:0,24,464	0/0:17,0:17:48.16:0,48,921	0/0:9,0:9:27.09:0,27,521	0/0:28,0:28:78.27:0,78,1507	0/0:22,0:21:66.23:0,66,1269	0/0:16,0:16:48.16:0,48,912	0/0:6,0:6:15.02:0,15,224
chr10	101559244	.	T	TC	6882.92	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-14.060;DP=686;FS=14.252;HRun=7;HaplotypeScore=73.3400;InbreedingCoeff=0.9924;MQ=64.88;MQ0=0;MQRankSum=-0.488;QD=28.92;ReadPosRankSum=-0.621;VQSLOD=3.8336;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,32:38:80.36:1009,80,0	1/1:1,7:8:15.05:181,15,0	0/0:20,0:20:22.63:0,23,441	0/0:18,0:16:32.37:0,32,307	0/0:31,0:31:84.11:0,84,802	0/0:33,0:33:80.13:0,80,747	0/0:33,0:33:65.23:0,65,698	1/1:6,30:36:75.22:895,75,0	0/0:29,0:29:78.12:0,78,752	0/0:23,0:23:57.08:0,57,549	0/0:14,0:14:39.05:0,39,371	0/0:26,0:26:72.10:0,72,690	0/0:30,0:30:81.12:0,81,782	0/0:20,0:20:48.07:0,48,463	0/0:20,0:20:48.07:0,48,463	1/1:2,15:17:39.12:471,39,0	0/0:52,0:51:99:0,135,1296	0/0:24,0:26:68.14:0,68,643	1/1:4,12:16:39.11:460,39,0	1/1:5,18:23:66.17:766,66,0	1/1:6,43:49:99:1486,123,0	0/0:13,0:13:39.06:0,39,376	0/0:20,0:20:57.09:0,57,550	0/0:20,0:20:51.08:0,51,492	0/0:19,0:19:51.08:0,51,492	1/1:3,27:30:81.22:964,81,0	1/1:0,14:14:42.13:507,42,0	1/1:0,6:6:11.91:145,12,0
chr10	101559804	.	CT	C	488.34	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.371;DP=639;FS=10.928;HRun=2;HaplotypeScore=64.4596;InbreedingCoeff=0.9957;MQ=82.08;MQ0=0;MQRankSum=-2.338;QD=30.52;ReadPosRankSum=0.246;VQSLOD=2.0169;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1559	0/0:8,0:8:21.07:0,21,315	0/0:22,0:22:52.41:0,52,755	0/0:22,0:22:56.33:0,56,726	0/0:25,0:25:66.22:0,66,982	0/0:28,0:28:84.28:0,84,1256	0/0:29,0:29:87.27:0,87,1263	0/0:40,0:40:99:0,114,1672	0/0:14,0:14:42.13:0,42,609	0/0:24,0:24:72.24:0,72,1079	0/0:17,0:17:51.16:0,51,745	0/0:25,0:25:75.25:0,75,1121	0/0:29,0:29:87.29:0,87,1291	0/0:18,0:18:54.18:0,54,810	0/0:20,0:20:60.20:0,60,898	0/0:25,0:25:75.25:0,75,1124	0/0:31,0:31:90.30:0,90,1342	1/1:1,15:16:45.15:583,45,0	0/0:18,0:18:54.18:0,54,810	0/0:19,0:19:57.18:0,57,833	0/0:28,0:28:84.27:0,84,1234	0/0:23,0:23:69.22:0,69,1013	0/0:19,0:19:57.17:0,57,807	0/0:25,0:25:75.17:0,75,1057	0/0:22,0:22:66.22:0,66,982	0/0:24,0:24:72.24:0,72,1079	0/0:22,0:22:66.22:0,66,988	0/0:11,0:11:33.11:0,33,494
chr10	101560049	.	G	GCA	1429.29	PASS	AB=0.967;AC=21;AF=0.404;AN=52;BaseQRankSum=5.529;DP=512;FS=0.577;HRun=0;HaplotypeScore=103.1494;InbreedingCoeff=0.2819;MQ=51.02;MQ0=6;MQRankSum=-3.687;QD=5.27;ReadPosRankSum=-5.082;VQSLOD=1.0651;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:4.90:31,5,0	1/1:8,0:7:4.23:27,4,0	./.	./.	0/1:9,0:9:12.77:20,0,13	1/1:10,9:21:10.30:362,10,0	0/1:19,9:30:70.12:197,0,70	0/0:19,0:19:2.48:0,2,12	0/0:15,0:18:20.53:0,21,197	0/0:16,0:15:11.95:0,12,113	0/0:11,0:11:12.03:0,12,132	1/1:19,0:20:7.84:63,8,0	1/1:11,0:11:13.32:60,13,0	0/1:23,0:22:7.10:65,0,7	0/0:7,0:7:6.01:0,6,66	1/1:11,0:11:5.67:35,6,0	0/0:30,0:34:62.24:0,62,569	0/0:13,0:13:8.76:0,9,54	0/0:4,0:4:5.98:0,6,53	0/1:11,0:11:38.85:39,0,68	0/1:60,0:60:39.02:351,0,39	0/0:2,0:6:5.68:0,6,28	0/0:15,0:15:17.97:0,18,171	0/0:39,0:41:47.73:0,48,473	0/0:6,0:8:11.82:0,12,92	0/1:18,0:18:80.10:83,0,80	0/1:17,0:16:8.92:182,0,9	1/1:7,0:7:9.01:85,9,0
chr10	101560085	.	A	ACG	2795.34	PASS	AB=0.917;AC=22;AF=0.393;AN=56;BaseQRankSum=9.752;DP=571;FS=1.350;HRun=0;HaplotypeScore=111.7723;InbreedingCoeff=0.2234;MQ=57.03;MQ0=13;MQRankSum=-2.139;QD=8.42;ReadPosRankSum=0.598;VQSLOD=3.5286;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:17:5.96:25,6,0	0/1:7,0:6:6.02:20,0,6	0/0:17,0:11:2.99:0,3,251	0/0:24,0:18:48.85:0,49,450	0/1:18,0:17:22.45:57,0,22	0/1:21,0:20:99:124,0,123	0/1:31,0:31:35.15:35,0,375	1/1:27,0:26:23.31:332,23,0	0/0:14,0:14:33.02:0,33,389	0/0:25,0:23:65.78:0,66,627	0/0:13,0:13:33.02:0,33,358	0/1:19,0:20:17.46:64,0,17	1/1:17,0:16:2.13:42,2,0	0/1:22,0:20:28.80:30,0,29	0/0:13,0:13:26.99:0,27,264	0/1:13,0:13:18.44:24,0,18	0/0:40,0:39:99:0,103,1166	0/0:13,0:13:29.85:0,30,212	0/1:15,0:15:50.32:106,0,50	0/1:6,9:16:15.93:93,0,16	1/1:41,13:54:98.81:1116,99,0	0/0:13,0:12:20.96:0,21,171	0/0:20,0:20:38.98:0,39,419	0/0:36,0:36:89.98:0,90,993	0/0:11,0:10:23.96:0,24,247	0/1:8,16:24:1.89:421,0,2	1/1:3,19:22:14.36:340,14,0	1/1:0,6:7:9.03:152,9,0
chr10	101560087	.	A	ACGCGCGCGCGCG	1558.22	PASS	AB=0.989;AC=17;AF=0.304;AN=56;BaseQRankSum=1.386;DP=581;FS=2.073;HRun=0;HaplotypeScore=209.8748;InbreedingCoeff=0.5279;MQ=58.43;MQ0=11;MQRankSum=-5.533;QD=7.71;ReadPosRankSum=-2.334;VQSLOD=2.2560;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,4:20:3.27:108,3,0	1/1:7,0:6:6:171,6,0	0/0:17,0:11:33.11:0,33,1057	0/0:27,0:21:51.17:0,51,1657	0/1:17,0:17:0.08:0,0,0	0/0:23,0:22:48.13:0,48,1242	0/0:32,0:32:63.40:0,63,1978	0/1:26,0:25:14.77:15,0,442	0/0:14,0:14:27.09:0,27,906	0/0:27,0:25:56.84:0,57,1553	0/0:13,0:13:36.09:0,36,1225	1/1:19,0:19:20.10:409,20,0	1/1:16,0:16:20:355,20,0	1/1:18,0:18:15.05:342,15,0	0/0:13,0:13:24.08:0,24,837	1/1:7,5:15:2.54:110,3,0	0/0:39,0:38:99:0,105,3251	0/0:11,0:13:30.52:0,31,829	0/1:17,0:17:99:173,0,115	0/1:19,0:19:7.25:7,0,147	0/0:53,0:53:59.41:0,59,770	0/0:13,0:12:21.07:0,21,704	0/0:20,0:20:41.94:0,42,1129	0/0:33,0:33:87.27:0,87,2771	0/0:11,0:10:21.06:0,21,666	0/1:25,0:25:41.66:42,0,397	0/0:24,0:24:5.34:0,5,235	0/0:7,0:7:9.01:0,9,85
chr10	101560092	.	C	CGCGCGCGT	2160.47	PASS	AB=0.907;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.053;DP=572;FS=3.878;HRun=0;HaplotypeScore=174.3747;InbreedingCoeff=0.5711;MQ=63.53;MQ0=8;MQRankSum=-5.039;QD=11.87;ReadPosRankSum=-0.593;VQSLOD=2.7232;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:6.58:76,7,0	1/1:6,0:5:5.99:82,6,0	0/0:23,0:16:42.13:0,42,937	0/0:34,0:28:68.70:0,69,1484	0/1:3,13:21:0:0,0,0	0/0:23,0:23:48.16:0,48,961	0/0:29,0:29:67.08:0,67,1603	0/1:26,0:26:3.84:4,0,208	0/0:11,0:11:27.09:0,27,726	0/0:22,0:21:59.84:0,60,1366	0/0:14,0:14:36.12:0,36,985	1/1:2,14:20:17.66:778,18,0	1/1:5,10:18:20.40:658,20,0	1/1:6,10:23:14.58:627,15,0	0/0:13,0:13:24.08:0,24,684	0/1:11,0:11:15.44:60,0,15	0/0:40,0:39:99:0,111,2791	0/0:12,0:12:33.41:0,33,665	0/1:13,0:13:39:39,0,122	0/0:17,0:17:17.35:0,17,174	0/0:46,0:46:7.40:0,7,297	0/0:12,0:11:21.07:0,21,598	0/0:18,0:18:41.97:0,42,1015	0/0:35,0:35:99:0,99,2419	0/0:11,0:10:24.07:0,24,584	0/1:25,0:25:4.76:5,0,211	0/0:22,0:23:10.69:0,11,156	0/0:7,0:7:8.58:0,9,44
chr10	101560121	.	A	AAACAAC	717.35	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.907;DP=550;FS=9.381;HRun=0;HaplotypeScore=141.5080;InbreedingCoeff=0.9186;MQ=71.23;MQ0=4;MQRankSum=-2.649;QD=79.71;ReadPosRankSum=0.209;VQSLOD=4.6951;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:39.12:0,39,818	0/0:3,0:3:9.03:0,9,204	0/0:22,0:19:36.25:0,36,777	0/0:38,0:33:63.97:0,64,1201	0/0:30,0:30:50.84:0,51,897	0/0:21,0:21:57.18:0,57,1170	0/0:31,0:31:84.24:0,84,1793	0/0:27,0:27:72.24:0,72,1448	0/0:10,0:10:24.08:0,24,484	0/0:23,0:23:69.20:0,69,1497	0/0:16,0:16:45.15:0,45,939	0/0:20,0:20:26.75:0,27,567	0/0:16,0:16:14.61:0,15,262	0/0:18,0:18:26.57:0,27,522	0/0:18,0:18:51.17:0,51,1138	0/0:16,0:16:27.09:0,27,567	0/0:38,0:37:99:0,102,2225	1/1:4,5:9:27.09:811,27,0	0/0:16,0:16:42.12:0,42,863	0/0:14,0:14:39.13:0,39,897	0/0:22,0:22:51.17:0,51,1108	0/0:18,0:17:48.15:0,48,1037	0/0:15,0:15:36.12:0,36,801	0/0:31,0:31:90.28:0,90,1988	0/0:14,0:14:36.12:0,36,785	0/0:17,0:17:45.13:0,45,987	0/0:17,0:17:24.08:0,24,540	0/0:12,0:12:21.03:0,21,364
chr10	101560309	.	CTGTGTG	C	1303.11	PASS	AB=0.815;AC=21;AF=0.553;AN=38;BaseQRankSum=-3.768;DP=461;FS=2.032;HRun=0;HaplotypeScore=108.7801;InbreedingCoeff=-0.0250;MQ=39.90;MQ0=85;MQRankSum=1.978;QD=4.29;ReadPosRankSum=0.849;VQSLOD=2.2661;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	1/1:20,0:15:14.28:123,14,0	./.	./.	1/1:23,0:22:20.92:266,21,0	0/1:23,1:21:50.01:243,0,50	0/0:10,0:15:2.94:0,3,36	0/1:10,0:20:0.13:0,0,1	1/1:12,0:15:2.66:44,3,0	0/1:8,0:11:0:0,0,1	0/1:10,12:19:0:0,0,0	0/1:14,0:17:9.48:9,0,14	1/1:24,0:16:19.92:253,20,0	0/0:17,0:10:7.03:0,7,166	0/1:6,0:6:32.11:32,0,51	./.	./.	0/1:16,1:16:46.06:77,0,46	0/1:6,8:13:0:0,0,0	0/1:26,0:21:13.87:14,0,164	0/1:24,0:22:48.84:244,0,49	0/1:12,0:10:56.53:73,0,57	0/0:11,0:11:5.90:0,6,38	1/1:9,0:3:3.01:43,3,0
chr10	101560332	.	T	TGAGA	311.98	PASS	AB=0.933;AC=7;AF=0.159;AN=44;BaseQRankSum=5.047;DP=425;FS=0.000;HRun=0;HaplotypeScore=101.8884;InbreedingCoeff=0.2299;MQ=39.43;MQ0=86;MQRankSum=-2.963;QD=5.20;ReadPosRankSum=1.741;VQSLOD=1.5118;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:3,0:1:3.01:0,3,51	./.	0/0:17,0:14:21.05:0,21,302	0/0:24,0:21:8.77:0,9,151	0/0:11,0:7:21.02:0,21,273	0/0:20,0:19:34.91:0,35,488	0/0:26,0:25:74.05:0,74,1140	0/0:21,0:19:12.03:0,12,181	0/0:21,0:18:5.98:0,6,56	0/0:14,0:11:11.81:0,12,93	0/0:15,0:10:2.78:0,3,36	0/0:29,0:26:30.02:0,30,488	0/1:18,0:13:51.23:51,0,61	0/0:24,0:16:42.01:0,42,547	0/0:16,0:8:14.53:0,15,171	0/1:11,0:8:88.42:141,0,88	./.	./.	0/0:16,0:14:18.06:0,18,318	0/0:14,0:13:9.01:0,9,111	0/0:27,0:22:45.15:0,45,697	0/0:20,0:18:39.06:0,39,495	0/1:9,3:8:99:100,0,113	1/1:8,2:9:5.66:125,6,0	1/1:7,0:2:2.50:9,2,0
chr10	101560346	.	T	TGAGAGAGAGA	2569.07	PASS	AB=1.000;AC=16;AF=0.296;AN=54;BaseQRankSum=1.714;DP=489;FS=11.242;HRun=0;HaplotypeScore=131.0581;InbreedingCoeff=0.5653;MQ=42.95;MQ0=83;MQRankSum=-7.609;QD=16.90;ReadPosRankSum=-3.391;VQSLOD=0.9510;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,6:13:0.47:1,0,0	./.	0/0:19,0:5:12:0,12,153	0/0:11,0:3:5.91:0,6,101	0/0:10,0:8:5.95:0,6,139	0/0:20,0:18:29.28:0,29,777	0/0:19,0:18:20.51:0,21,508	0/1:33,0:26:44.08:718,0,44	0/0:19,0:18:21.07:0,21,596	0/0:22,0:22:35.06:0,35,1295	0/0:22,0:20:18.06:0,18,473	0/0:20,0:17:5.62:0,6,133	0/0:18,0:15:18.06:0,18,373	0/0:19,0:14:8.66:0,9,203	0/0:27,0:24:33.11:0,33,940	1/1:20,0:15:11.91:327,12,0	0/0:19,0:12:18.06:0,18,513	0/0:10,0:8:6.02:0,6,109	1/1:15,0:12:1.57:540,2,0	1/1:9,0:7:4.26:98,4,0	1/1:17,0:7:2.96:44,3,0	0/0:14,0:12:9.01:0,9,203	0/0:15,0:14:17.80:0,18,410	0/0:27,0:23:42.14:0,42,1185	0/0:18,0:16:33.11:0,33,890	0/1:12,0:8:70.13:236,0,70	1/1:17,0:14:20.43:573,20,0	1/1:10,0:5:9.03:194,9,0
chr10	101560772	.	G	GT	358.16	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.037;DP=593;FS=3.848;HRun=6;HaplotypeScore=56.3143;InbreedingCoeff=0.9765;MQ=88.08;MQ0=0;MQRankSum=-2.144;QD=25.58;ReadPosRankSum=1.530;VQSLOD=3.9534;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.19:0,90,912	0/0:6,0:6:18.04:0,18,184	0/0:23,0:23:63.07:0,63,617	0/0:21,0:21:49.26:0,49,538	0/0:22,0:21:60.12:0,60,605	0/0:27,0:27:78.18:0,78,796	0/0:21,0:21:51.11:0,51,520	0/0:37,0:37:99:0,99,999	0/0:22,0:22:57.13:0,57,581	0/0:22,0:22:51.11:0,51,516	0/0:26,0:26:69.15:0,69,704	0/0:23,0:23:66.09:0,66,650	0/0:22,0:22:60.14:0,60,612	0/0:19,0:19:54.10:0,54,542	0/0:20,0:20:60.12:0,60,605	0/0:15,0:15:45.05:0,45,437	0/0:16,0:16:42.06:0,42,419	1/1:1,13:14:36.12:453,36,0	0/0:23,0:23:69.15:0,69,698	0/0:24,0:24:69.09:0,69,691	0/0:21,0:21:60.14:0,60,612	0/0:17,0:17:45.08:0,45,450	0/0:19,0:19:57.13:0,57,581	0/0:25,0:24:66.12:0,66,661	0/0:22,0:22:60.13:0,60,612	0/0:27,0:27:75.05:0,75,751	0/0:23,0:23:66.13:0,66,666	0/0:5,0:5:15.03:0,15,153
chr10	101560885	.	TG	T	235.95	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.737;DP=552;FS=6.676;HRun=4;HaplotypeScore=53.4419;InbreedingCoeff=0.8497;MQ=78.74;MQ0=0;MQRankSum=-2.540;QD=14.75;ReadPosRankSum=0.699;VQSLOD=2.1976;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.21:0,84,1088	0/0:16,0:16:39.12:0,39,528	0/0:21,0:19:41.19:0,41,386	0/0:14,0:12:6.85:0,7,182	0/0:21,0:21:60.16:0,60,783	0/0:22,0:22:66.13:0,66,847	0/0:21,0:21:57.17:0,57,764	0/0:24,0:24:72.16:0,72,886	0/0:20,0:20:57.19:0,57,796	0/0:27,0:27:75.24:0,75,1020	0/0:17,0:17:51.16:0,51,696	0/0:19,0:19:57.07:0,57,709	0/0:28,0:28:81.21:0,81,1034	0/0:17,0:17:45.12:0,45,594	0/0:19,0:19:57.16:0,57,745	0/0:16,0:16:39.10:0,39,497	0/0:17,0:17:48.12:0,48,633	1/1:2,14:16:13.73:323,14,0	0/0:23,0:23:66.19:0,66,874	0/0:14,0:14:36.10:0,36,471	0/0:15,0:15:42.11:0,42,551	0/0:22,0:22:63.16:0,63,799	0/0:21,0:21:57.16:0,57,762	0/0:16,0:16:48.11:0,48,604	0/0:18,0:18:48.14:0,48,639	0/0:28,0:28:78.25:0,78,1075	0/0:29,0:28:77.16:0,77,1005	0/0:3,0:3:9.03:0,9,125
chr10	101561059	.	G	GC	1034.96	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-5.251;DP=474;FS=3.953;HRun=9;HaplotypeScore=51.4228;InbreedingCoeff=0.9159;MQ=81.26;MQ0=0;MQRankSum=0.472;QD=19.53;ReadPosRankSum=0.284;VQSLOD=3.9174;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:35.94:0,36,302	0/0:12,0:12:32.99:0,33,286	0/0:18,0:18:23:0,23,201	0/0:15,0:15:26.52:0,27,189	1/1:3,17:20:32.16:513,32,0	0/0:21,0:21:56.96:0,57,488	0/0:18,0:18:47.94:0,48,406	0/0:18,0:18:44.92:0,45,376	0/0:16,0:16:47.92:0,48,408	0/0:26,0:26:59.97:0,60,519	0/0:26,0:26:68.37:0,68,563	1/1:1,9:10:21.06:232,21,0	1/1:4,8:12:18.05:198,18,0	1/1:1,10:11:1.09:240,1,0	0/0:20,0:21:53.02:0,53,449	0/0:12,0:12:29.98:0,30,257	0/0:25,0:25:68.94:0,69,588	0/0:27,0:27:77.97:0,78,673	0/0:20,0:20:44.97:0,45,388	0/0:23,0:23:59.93:0,60,511	0/0:6,0:6:18:0,18,156	0/0:19,0:19:50.98:0,51,440	0/0:15,0:15:38.98:0,39,338	0/0:6,0:6:11.98:0,12,102	0/0:14,0:14:35.96:0,36,307	0/0:16,0:16:44.95:0,45,381	0/0:25,0:25:71.95:0,72,619	0/0:7,0:7:21:0,21,182
chr10	101561537	.	A	ACCAGATG	600.77	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.472;DP=689;FS=3.116;HRun=0;HaplotypeScore=173.7756;InbreedingCoeff=0.9561;MQ=86.83;MQ0=0;MQRankSum=-3.624;QD=50.06;ReadPosRankSum=-0.418;VQSLOD=3.5358;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,2640	0/0:4,0:4:12.04:0,12,315	0/0:29,0:29:87.30:0,87,2121	0/0:18,0:18:19.07:0,19,1126	0/0:29,0:29:87.28:0,87,2260	0/0:22,0:22:66.23:0,66,1708	0/0:15,0:15:45.15:0,45,1132	0/0:34,0:34:90.06:0,90,2497	0/0:30,0:30:87.28:0,87,2249	0/0:34,0:34:99:0,102,2620	0/0:26,0:26:72.21:0,72,1739	0/0:27,0:27:81.28:0,81,2149	0/0:29,0:29:87.30:0,87,2278	0/0:28,0:28:81.28:0,81,2183	0/0:24,0:24:69.24:0,69,1858	0/0:28,0:28:84.29:0,84,2257	0/0:36,0:35:99:0,108,2911	1/1:1,7:12:18.06:691,18,0	0/0:19,0:19:54.15:0,54,1240	0/0:28,0:28:84.29:0,84,2222	0/0:26,0:26:75.26:0,75,2010	0/0:16,0:16:48.16:0,48,1281	0/0:35,0:35:99:0,102,2618	0/0:18,0:18:48.12:0,48,1225	0/0:22,0:22:60.21:0,60,1607	0/0:25,0:25:75.26:0,75,1986	0/0:30,0:30:90.31:0,90,2345	0/0:11,0:11:33.11:0,33,884
chr10	101561657	.	AT	A	195.09	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.085;DP=729;FS=2.589;HRun=8;HaplotypeScore=67.0213;InbreedingCoeff=0.9894;MQ=82.99;MQ0=0;MQRankSum=-2.899;QD=17.74;ReadPosRankSum=-0.102;VQSLOD=3.6205;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.25:0,87,1038	0/0:8,0:8:24.07:0,24,290	0/0:24,0:24:63.02:0,63,722	0/0:17,0:17:45:0,45,477	0/0:33,0:33:96.28:0,96,1148	0/0:34,1:35:67.32:0,67,1094	0/0:20,0:20:57.17:0,57,688	0/0:36,0:36:84.26:0,84,1015	0/0:34,0:34:96.26:0,96,1134	0/0:33,0:33:93.27:0,93,1104	0/0:32,0:32:93.28:0,93,1114	0/0:35,0:35:99:0,105,1226	0/0:38,0:38:99:0,114,1360	0/0:38,0:38:99:0,108,1279	0/0:28,0:28:78.23:0,78,930	0/0:29,0:29:81.24:0,81,969	0/0:20,0:20:60.16:0,60,702	1/1:0,11:11:30.05:290,30,0	0/0:37,0:37:99:0,99,1185	0/0:27,0:27:75.21:0,75,893	0/0:12,0:12:36.11:0,36,435	0/0:28,0:28:81.23:0,81,957	0/0:17,0:17:51.11:0,51,578	0/0:16,0:16:42.13:0,42,507	0/0:22,0:22:66.20:0,66,797	0/0:30,0:30:81.25:0,81,978	0/0:32,0:32:87.25:0,87,1039	0/0:6,0:6:18.06:0,18,217
chr10	101562359	.	A	AATACC	278.37	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.012;DP=400;FS=0.000;HRun=0;HaplotypeScore=70.9831;InbreedingCoeff=0.9257;MQ=81.00;MQ0=0;MQRankSum=-3.381;QD=55.67;ReadPosRankSum=2.083;VQSLOD=3.9528;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:30.10:0,30,638	0/0:5,0:5:12.04:0,12,256	0/0:12,0:12:33.11:0,33,640	0/0:11,0:11:27.09:0,27,482	0/0:11,0:11:33.11:0,33,689	0/0:14,0:14:42.12:0,42,817	0/0:13,0:13:36.11:0,36,713	0/0:23,0:23:66.20:0,66,1261	0/0:11,0:11:27.08:0,27,537	0/0:18,0:18:51.16:0,51,994	0/0:18,0:18:51.15:0,51,1010	0/0:13,0:13:36.11:0,36,721	0/0:18,0:18:51.12:0,51,932	0/0:18,0:18:48.15:0,48,983	0/0:22,0:22:60.18:0,60,1200	0/0:14,0:14:42.13:0,42,856	0/0:19,0:19:54.14:0,54,1067	1/1:0,5:5:12.04:364,12,0	0/0:22,0:22:63.17:0,63,1282	0/0:14,0:14:39.13:0,39,799	0/0:22,0:22:51.14:0,51,989	0/0:6,0:6:18.06:0,18,384	0/0:10,0:10:27.08:0,27,538	0/0:16,0:16:42.05:0,42,726	0/0:14,0:14:36.11:0,36,729	0/0:20,0:20:57.18:0,57,1104	0/0:10,0:10:30.10:0,30,637	0/0:10,0:10:26.30:0,26,519
chr10	101562499	.	CATATATAT	C	122.36	PASS	AC=6;AF=0.214;AN=28;BaseQRankSum=2.349;DP=150;FS=0.000;HRun=0;HaplotypeScore=39.7379;InbreedingCoeff=0.4092;MQ=71.00;MQ0=2;MQRankSum=-1.312;QD=9.41;ReadPosRankSum=1.556;VQSLOD=1.2543;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,4:8:3.01:77,3,0	1/1:1,1:3:6.02:132,6,0	./.	./.	0/0:6,0:6:3.01:0,3,65	0/0:3,0:3:6.02:0,6,147	./.	0/0:14,0:14:9.03:0,9,207	./.	0/0:7,0:7:6.02:0,6,190	0/0:6,0:6:3.01:0,3,95	./.	1/1:2,0:2:1.55:4,2,0	0/0:8,0:8:6.02:0,6,123	0/0:4,0:4:6.02:0,6,249	./.	0/0:6,0:8:21.07:0,21,749	0/0:10,0:9:6.02:0,6,173	./.	./.	./.	./.	./.	./.	0/0:7,0:7:9.03:0,9,311	./.	./.	0/0:2,0:5:3.01:0,3,105
chr10	101562864	.	TC	T	323.97	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.891;DP=553;FS=2.239;HRun=1;HaplotypeScore=66.7674;InbreedingCoeff=0.9723;MQ=71.41;MQ0=10;MQRankSum=-0.017;QD=17.05;ReadPosRankSum=1.175;VQSLOD=3.9948;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.01:0,93,1208	0/0:7,0:7:21:0,21,263	0/0:24,0:15:14.35:0,14,203	0/0:25,0:16:35.78:0,36,319	0/0:24,0:23:69.01:0,69,837	0/0:15,0:15:42.10:0,42,550	0/0:26,0:25:72.16:0,72,897	0/0:32,0:32:77.05:0,77,1058	0/0:27,0:26:75.11:0,75,885	0/0:25,0:25:75.15:0,75,952	0/0:18,0:18:45.84:0,46,548	0/0:18,0:18:54.17:0,54,715	0/0:19,0:19:57.15:0,57,726	0/0:23,0:23:65.68:0,66,778	0/0:22,0:21:60.12:0,60,793	0/0:22,0:22:60.15:0,60,746	0/0:34,0:32:87.19:0,87,1109	1/1:0,19:19:30.10:418,30,0	0/0:14,0:12:36.09:0,36,447	0/0:15,0:15:45.05:0,45,571	0/0:14,0:14:42.04:0,42,457	0/0:14,0:14:25.24:0,25,417	0/0:11,0:11:26.90:0,27,337	0/0:13,0:13:39.10:0,39,496	0/0:16,0:16:48.08:0,48,599	0/0:21,0:21:63.13:0,63,782	0/0:14,0:14:42.05:0,42,521	0/0:9,0:9:23.34:0,23,301
chr10	101564671	.	ATG	A	5626.39	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.756;DP=635;FS=10.816;HRun=0;HaplotypeScore=76.8969;InbreedingCoeff=0.9966;MQ=93.85;MQ0=1;MQRankSum=-2.317;QD=35.84;ReadPosRankSum=-0.500;VQSLOD=6.0564;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.27:0,78,1378	0/0:8,0:8:24.08:0,24,424	0/0:30,0:30:78.26:0,78,1346	0/0:37,0:37:91.81:0,92,1451	0/0:29,0:29:87.28:0,87,1502	0/0:19,0:19:57.20:0,57,1001	0/0:17,0:17:48.13:0,48,788	1/1:1,34:35:99:1305,102,0	0/0:22,0:22:63.18:0,63,1049	0/0:25,0:25:75.25:0,75,1300	0/0:24,0:24:69.20:0,69,1162	0/0:12,0:12:30.10:0,30,530	0/0:27,0:27:78.20:0,78,1304	0/0:27,0:27:78.23:0,78,1312	0/0:24,0:24:69.24:0,69,1211	0/0:20,0:20:51.16:0,51,866	0/0:18,0:18:51.17:0,51,892	0/0:24,0:24:72.19:0,72,1224	1/1:2,17:19:51.14:664,51,0	1/1:2,18:20:48.05:615,48,0	1/1:0,15:15:33.11:453,33,0	0/0:16,0:16:45.14:0,45,766	0/0:25,0:25:66.21:0,66,1128	0/0:20,0:20:60.14:0,60,969	0/0:28,0:28:81.28:0,81,1432	1/1:0,23:22:63.21:860,63,0	1/1:0,38:38:99:1524,111,0	1/1:0,7:7:15.05:206,15,0
chr10	101565488	.	CTATG	C	1628.21	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.939;DP=636;FS=4.081;HRun=0;HaplotypeScore=100.4980;InbreedingCoeff=0.9648;MQ=73.14;MQ0=0;MQRankSum=-0.855;QD=31.31;ReadPosRankSum=2.254;VQSLOD=3.7439;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:36.12:599,36,0	1/1:4,8:12:18.06:305,18,0	0/0:20,0:18:35.78:0,36,643	0/0:24,0:21:6.88:0,7,376	0/0:28,0:28:75.20:0,75,1769	0/0:26,0:25:72.23:0,72,1684	0/0:16,0:16:42.13:0,42,996	0/0:43,0:43:84.24:0,84,1825	0/0:17,0:17:42.14:0,42,1044	0/0:21,0:21:45.15:0,45,1076	0/0:21,0:21:57.18:0,57,1366	0/0:25,0:25:66.21:0,66,1589	0/0:38,0:38:90.27:0,90,2112	0/0:17,0:17:39.12:0,39,917	0/0:21,0:21:54.14:0,54,1194	1/1:1,21:22:51.17:866,51,0	0/0:27,0:27:66.19:0,66,1540	0/0:10,0:10:27.07:0,27,610	0/0:14,0:14:24.07:0,24,550	0/0:29,0:29:60.17:0,60,1363	0/0:16,0:16:33.10:0,33,773	0/0:23,0:23:60.15:0,60,1342	0/0:26,0:26:72.23:0,72,1732	0/0:18,0:18:42.14:0,42,1048	0/0:30,0:30:81.23:0,81,1865	0/0:35,1:36:45.40:0,45,2216	0/0:25,0:25:69.22:0,69,1669	0/0:13,0:13:33.11:0,33,824
chr10	101567373	.	AGTGT	A	3759.09	PASS	AB=0.825;AC=28;AF=0.500;AN=56;BaseQRankSum=10.177;DP=447;FS=0.557;HRun=0;HaplotypeScore=95.5532;InbreedingCoeff=0.8191;MQ=61.83;MQ0=4;MQRankSum=-0.581;QD=16.71;ReadPosRankSum=2.214;VQSLOD=3.4273;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:20:15.95:72,16,0	1/1:1,0:4:5.34:23,5,0	0/0:32,0:23:27.74:0,28,505	0/0:22,0:13:18.06:0,18,381	1/1:7,1:22:15.36:95,15,0	0/0:22,0:22:54.17:0,54,1249	0/0:19,0:19:30.09:0,30,663	1/1:12,18:30:51.64:800,52,0	0/0:13,0:13:33.11:0,33,639	0/0:16,0:16:41.89:0,42,929	0/0:10,0:11:23.80:0,24,529	1/1:4,0:11:10.53:43,11,0	1/1:4,0:12:11.05:41,11,0	1/1:5,0:13:26.35:148,26,0	0/0:8,0:8:18.04:0,18,311	1/1:5,1:13:16.29:104,16,0	0/0:23,0:24:52.15:0,52,1083	0/0:17,0:17:39.07:0,39,643	1/1:4,6:10:15.04:224,15,0	1/1:10,15:26:42.14:660,42,0	1/1:7,5:12:15.05:235,15,0	0/0:12,0:12:33.11:0,33,719	0/1:9,0:9:31.49:31,0,254	0/0:10,0:10:24.08:0,24,499	0/0:16,0:16:39.13:0,39,958	1/1:5,9:15:27.55:422,28,0	1/1:4,11:15:36.11:558,36,0	0/1:6,6:13:15.09:303,0,15
chr10	101567396	.	G	GTATA	559.24	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=-2.515;DP=399;FS=1.973;HRun=0;HaplotypeScore=103.9682;InbreedingCoeff=0.3470;MQ=60.32;MQ0=6;MQRankSum=0.918;QD=5.89;ReadPosRankSum=-3.764;VQSLOD=1.3767;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:16.82:0,17,91	0/0:3,0:3:5.02:0,5,20	0/0:27,0:13:16.28:0,16,228	0/0:22,0:12:3.63:0,4,164	0/0:18,0:18:1.52:0,2,69	0/0:21,0:21:54.18:0,54,903	0/0:13,0:13:27.07:0,27,431	0/1:30,0:30:16.25:16,0,153	1/1:4,0:12:22.38:102,22,0	0/0:19,0:19:45.15:0,45,762	0/0:13,0:13:36.12:0,36,592	0/0:9,0:9:10.35:0,10,46	0/1:10,0:10:6.94:7,0,59	0/0:12,0:12:16.59:0,17,100	0/0:8,0:8:9.01:0,9,123	0/0:9,0:9:16.77:0,17,103	0/0:19,0:19:39.32:0,39,756	1/1:4,10:14:24.04:553,24,0	0/1:16,0:13:15.58:16,0,39	0/0:18,0:18:13.70:0,14,174	0/0:8,0:8:10.86:0,11,51	0/0:12,0:12:24.05:0,24,345	0/0:9,0:9:18.04:0,18,264	0/0:8,0:8:15.05:0,15,255	0/0:15,0:15:36.12:0,36,622	0/1:13,0:13:3.11:3,0,91	0/0:11,0:11:27.32:0,27,141	0/0:9,0:9:22.27:0,22,144
chr10	101567488	.	TTA	T	273.29	PASS	AB=0.600;AC=7;AF=0.130;AN=54;BaseQRankSum=4.654;DP=220;FS=8.860;HRun=0;HaplotypeScore=45.3992;InbreedingCoeff=0.5058;MQ=61.92;MQ0=3;MQRankSum=-0.393;QD=10.93;ReadPosRankSum=0.306;VQSLOD=1.8253;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,6:13:21.89:297,22,0	0/1:1,2:3:18.17:51,0,18	1/1:7,0:4:0.89:2,1,0	0/0:6,0:2:2.60:0,3,10	0/0:13,0:13:29.75:0,30,348	0/0:22,0:22:62.76:0,63,959	0/0:8,0:8:24.08:0,24,396	0/0:27,0:27:57.01:0,57,697	0/0:3,0:3:9.03:0,9,152	0/0:12,0:12:30.10:0,30,520	0/0:8,0:8:24.08:0,24,396	0/0:5,0:5:12.04:0,12,184	0/0:6,0:6:15.04:0,15,196	0/0:2,0:2:6.02:0,6,86	0/0:5,0:5:12.04:0,12,205	1/1:1,1:2:3.01:40,3,0	0/0:13,0:13:35.15:0,35,564	0/0:8,0:7:14.95:0,15,183	0/0:4,0:4:8.52:0,9,104	0/0:3,0:3:6.02:0,6,88	./.	0/0:3,0:3:6.02:0,6,104	0/0:9,0:9:21.07:0,21,363	0/0:4,0:4:12.04:0,12,206	0/0:5,0:5:15.05:0,15,241	0/0:13,0:13:21.58:0,22,418	0/0:5,0:5:14.95:0,15,169	0/0:10,0:9:14.98:0,15,168
chr10	101567503	.	GTA	G	1970.35	PASS	AB=0.917;AC=29;AF=0.558;AN=52;BaseQRankSum=4.658;DP=213;FS=8.779;HRun=0;HaplotypeScore=42.1020;InbreedingCoeff=0.4566;MQ=69.39;MQ0=3;MQRankSum=-1.613;QD=14.93;ReadPosRankSum=-2.328;VQSLOD=1.4775;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:24.19:69,0,24	0/1:3,0:3:6.20:6,0,25	0/0:10,0:5:2.68:0,3,11	./.	1/1:2,9:11:21.07:262,21,0	0/1:18,2:20:17.78:18,0,747	0/0:8,0:8:21.04:0,21,284	1/1:11,9:20:45.07:525,45,0	0/0:2,0:2:6.01:0,6,74	0/0:13,0:13:22.27:0,22,416	0/1:6,1:7:16.38:16,0,248	1/1:4,0:4:9:87,9,0	1/1:3,3:6:15.04:178,15,0	1/1:2,0:2:6:60,6,0	0/1:3,1:4:25.42:25,0,136	1/1:1,0:1:2.88:15,3,0	0/0:12,0:12:31.14:0,31,486	1/1:5,2:6:11.71:122,12,0	1/1:1,3:4:9.03:112,9,0	1/1:0,2:2:3.01:37,3,0	./.	0/0:2,0:2:6.02:0,6,99	0/0:7,0:7:15.04:0,15,221	0/0:4,0:4:9.03:0,9,148	0/0:7,0:7:18.06:0,18,296	1/1:7,6:12:11.50:284,11,0	1/1:4,3:7:12.51:150,13,0	1/1:0,9:8:15.05:187,15,0
chr10	101568856	.	C	CATCCGAAGCAATTAAACTGCATT	37986.58	PASS	AB=0.702;AC=54;AF=0.964;AN=56;BaseQRankSum=-0.186;DP=256;FS=19.981;HRun=0;HaplotypeScore=271.0007;InbreedingCoeff=-0.0488;MQ=74.87;MQ0=0;MQRankSum=-2.198;QD=148.39;ReadPosRankSum=1.779;VQSLOD=3.2548;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:30.08:1955,30,0	1/1:4,0:4:3.01:269,3,0	0/1:2,0:8:5.56:806,0,6	0/1:8,1:10:11.35:941,0,11	1/1:13,0:13:30:2029,30,0	1/1:15,0:15:36.12:2483,36,0	1/1:11,0:11:30.12:1020,30,0	1/1:11,0:11:33.11:2323,33,0	1/1:10,0:10:27.09:1173,27,0	1/1:9,0:9:18.06:1472,18,0	1/1:12,0:12:33.11:1950,33,0	1/1:11,0:11:18.06:1129,18,0	1/1:7,0:7:12.04:578,12,0	1/1:7,0:7:18.06:1355,18,0	1/1:14,0:14:36.55:2355,37,0	1/1:12,0:12:27.06:1541,27,0	1/1:7,0:7:12.04:805,12,0	1/1:6,0:6:15.05:1078,15,0	1/1:10,0:10:27.09:1556,27,0	1/1:5,0:5:12.04:892,12,0	1/1:7,0:7:15.05:989,15,0	1/1:6,0:6:15.05:977,15,0	1/1:4,0:4:9.03:221,9,0	1/1:6,0:6:9.03:418,9,0	1/1:11,0:11:32.90:2084,33,0	1/1:10,0:10:24.08:1883,24,0	1/1:9,0:9:27.09:1868,27,0	1/1:7,0:7:21.07:1836,21,0
chr10	101569999	.	TCACA	T	1273.07	PASS	AB=0.847;AC=15;AF=0.268;AN=56;BaseQRankSum=6.875;DP=742;FS=15.532;HRun=0;HaplotypeScore=129.7260;InbreedingCoeff=0.6068;MQ=58.03;MQ0=28;MQRankSum=-0.997;QD=5.20;ReadPosRankSum=2.004;VQSLOD=1.7178;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,29:43:29.13:438,29,0	1/1:4,4:8:12.93:194,13,0	0/1:69,0:17:0.84:1,0,36	0/0:70,0:17:4.81:0,5,28	0/1:2,0:13:5.63:22,0,6	0/0:23,0:22:36.87:0,37,743	0/0:25,0:24:50.79:0,51,923	0/0:25,0:24:10.99:0,11,130	0/0:19,0:19:36.12:0,36,753	0/0:24,0:23:29.51:0,30,563	0/0:15,0:15:34.33:0,34,645	1/1:12,0:24:17.76:152,18,0	1/1:13,1:15:9.60:171,10,0	1/1:5,0:25:2.90:174,3,0	0/0:35,0:38:67.76:0,68,1271	1/1:13,15:28:4.55:265,5,0	0/0:32,1:33:10.54:0,11,1203	0/0:23,0:25:44.25:0,44,801	0/1:18,0:17:28:28,0,187	0/0:10,0:24:5.25:0,5,74	0/0:35,0:33:7.86:0,8,86	0/0:19,0:20:30.09:0,30,636	0/0:18,0:18:10.66:0,11,411	0/0:43,0:45:92.43:0,92,1833	0/0:8,0:17:29.52:0,30,423	0/0:8,0:15:11.37:0,11,225	0/0:6,0:15:7.58:0,8,108	0/0:3,0:4:6.02:0,6,94
chr10	101573789	.	GT	G	3995.60	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.137;DP=637;FS=0.706;HRun=10;HaplotypeScore=61.9926;InbreedingCoeff=0.9643;MQ=73.82;MQ0=0;MQRankSum=-1.217;QD=21.48;ReadPosRankSum=0.097;VQSLOD=4.4393;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:36.10:0,36,398	0/0:16,0:16:43.93:0,44,470	0/0:13,0:13:23.90:0,24,233	0/0:12,0:12:22.57:0,23,191	0/0:35,1:36:76.20:0,76,1054	0/0:16,0:16:45.10:0,45,483	0/0:10,0:10:2.85:0,3,211	1/1:8,23:32:52.32:541,52,0	0/0:16,2:18:19.06:0,19,431	0/0:40,0:40:99:0,114,1251	0/0:24,0:24:63.17:0,63,697	0/0:20,0:20:57.14:0,57,622	0/0:17,0:17:36.09:0,36,390	0/0:26,0:26:69.19:0,69,763	0/0:24,0:24:60.10:0,60,642	0/0:15,0:15:36.10:0,36,398	0/0:25,0:25:63.17:0,63,697	0/0:14,0:14:36.08:0,36,389	1/1:2,18:20:53.99:469,54,0	1/1:2,25:27:71.98:625,72,0	1/1:1,17:18:44.99:391,45,0	0/0:22,0:22:57.15:0,57,623	0/0:33,0:33:87.22:0,87,953	0/0:15,0:15:36.10:0,36,398	0/0:40,0:40:99:0,114,1241	1/1:3,29:32:86.93:746,87,0	1/1:5,43:48:99:1068,123,0	1/1:3,6:9:17.98:156,18,0
chr10	101574066	.	G	GC	9340.95	PASS	AB=0.896;AC=54;AF=0.964;AN=56;BaseQRankSum=4.192;DP=696;FS=0.812;HRun=1;HaplotypeScore=171.9340;InbreedingCoeff=-0.0373;MQ=80.77;MQ0=0;MQRankSum=-2.700;QD=13.42;ReadPosRankSum=7.343;VQSLOD=3.9969;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:81.68:528,82,0	1/1:16,0:16:19.59:193,20,0	0/1:12,2:14:48.82:143,0,49	0/1:20,2:22:14.32:265,0,14	1/1:31,0:31:27.52:379,28,0	1/1:24,0:24:63.92:358,64,0	1/1:12,0:12:31.72:169,32,0	1/1:36,0:36:86.10:405,86,0	1/1:28,0:28:45.95:353,46,0	1/1:27,0:26:72.72:351,73,0	1/1:22,0:22:58.81:325,59,0	1/1:32,0:32:65.42:443,65,0	1/1:19,0:19:49.22:273,49,0	1/1:34,0:34:92.06:492,92,0	1/1:38,0:38:84.52:534,85,0	1/1:32,0:32:86.11:450,86,0	1/1:28,0:28:75.37:416,75,0	1/1:16,0:16:20.95:200,21,0	1/1:22,0:22:28.37:211,28,0	1/1:26,0:26:40.02:321,40,0	1/1:31,0:31:86.84:474,87,0	1/1:22,0:22:58.83:322,59,0	1/1:20,0:20:50.08:270,50,0	1/1:23,0:23:64.16:370,64,0	1/1:26,0:26:20.66:300,21,0	1/1:28,0:28:31.50:315,32,0	1/1:24,0:24:66.72:376,67,0	1/1:6,0:6:17.61:106,18,0
chr10	101575325	.	GACAC	G	576.76	PASS	AB=0.979;AC=17;AF=0.327;AN=52;BaseQRankSum=2.883;DP=249;FS=14.800;HRun=0;HaplotypeScore=135.8980;InbreedingCoeff=0.3968;MQ=38.31;MQ0=5;MQRankSum=-1.652;QD=6.41;ReadPosRankSum=3.123;VQSLOD=2.0011;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:15:16.70:20,0,17	1/1:3,0:4:3:28,3,0	./.	./.	1/1:3,3:6:3.01:36,3,0	0/0:7,0:8:14.79:0,15,278	0/1:15,0:15:29.78:30,0,164	0/0:18,0:16:6.02:0,6,101	0/0:7,0:8:14.79:0,15,279	0/0:9,0:9:18.06:0,18,414	0/1:9,0:9:26.39:26,0,376	1/1:2,2:4:9.03:137,9,0	1/1:3,8:11:15.05:237,15,0	1/1:5,4:9:12.04:190,12,0	0/0:10,0:11:20.81:0,21,414	1/1:3,0:4:3:28,3,0	0/0:3,0:6:3.01:0,3,52	0/0:7,0:7:2.97:0,3,20	0/0:6,0:5:3.48:0,3,66	0/0:10,0:8:3.01:0,3,51	1/1:13,0:12:0.47:1,0,0	0/0:9,0:9:11.95:0,12,153	0/0:6,0:5:6.02:0,6,96	0/0:8,0:8:9.03:0,9,190	0/0:14,0:15:21.07:0,21,499	0/0:9,0:9:12.04:0,12,233	0/0:8,0:8:9.03:0,9,115	0/0:0,0:1:3.01:0,3,52
chr10	101576766	.	GGAAGA	G	2617.07	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.822;DP=518;FS=7.667;HRun=0;HaplotypeScore=101.6746;InbreedingCoeff=0.9929;MQ=76.35;MQ0=1;MQRankSum=-4.266;QD=42.21;ReadPosRankSum=2.018;VQSLOD=3.4619;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:37.85:0,38,1429	0/0:9,0:9:24.08:0,24,723	0/0:20,0:16:42.49:0,42,775	0/0:24,0:19:40.91:0,41,934	1/1:4,13:17:39.09:686,39,0	0/0:24,0:24:63.20:0,63,1798	0/0:13,0:13:39.12:0,39,1082	0/0:22,0:22:48.16:0,48,1308	0/0:11,0:11:30.10:0,30,852	0/0:22,0:22:57.20:0,57,1655	0/0:20,0:20:56.78:0,57,1577	1/1:4,12:16:30.10:615,30,0	1/1:1,15:16:36.12:738,36,0	1/1:0,13:13:36.12:738,36,0	0/0:19,0:19:48.16:0,48,1330	0/0:19,0:19:51.17:0,51,1486	0/0:32,0:32:93.32:0,93,2725	0/0:10,0:10:24.08:0,24,704	0/0:6,0:6:15.05:0,15,416	0/0:26,0:26:60.21:0,60,1747	0/0:18,0:18:54.19:0,54,1581	0/0:22,0:22:51.15:0,51,1433	0/0:16,0:16:45.15:0,45,1348	0/0:30,0:30:84.29:0,84,2504	0/0:22,0:22:57.20:0,57,1633	0/0:13,0:13:36.12:0,36,1073	0/0:24,0:24:63.22:0,63,1901	0/0:7,0:7:21.04:0,21,433
chr10	101576852	.	GGGC	G	157.05	PASS	AB=0.964;AC=5;AF=0.093;AN=54;BaseQRankSum=5.986;DP=506;FS=6.105;HRun=0;HaplotypeScore=107.6411;InbreedingCoeff=0.6701;MQ=76.88;MQ0=5;MQRankSum=-2.224;QD=2.42;ReadPosRankSum=-2.445;VQSLOD=1.0077;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,3:6:8.78:129,9,0	./.	0/0:37,0:23:46.47:0,46,874	0/1:52,2:24:10.24:10,0,334	0/0:13,0:13:33.11:0,33,812	0/0:13,0:14:24.97:0,25,894	0/0:13,0:13:39.12:0,39,886	0/0:6,0:6:15.05:0,15,370	0/0:18,0:18:54.19:0,54,1298	0/0:28,0:28:78.26:0,78,1871	0/0:18,0:18:54.17:0,54,1275	0/0:19,0:19:54.17:0,54,1252	0/0:16,0:16:48.16:0,48,1175	0/0:18,0:17:51.18:0,51,1257	0/0:20,0:20:60.21:0,60,1461	1/1:2,2:4:9.02:130,9,0	0/0:29,0:30:86.51:0,87,2077	0/0:17,0:17:51.18:0,51,1247	0/0:12,0:11:33.08:0,33,691	0/0:15,0:14:42.14:0,42,1032	0/0:29,0:29:87.07:0,87,2012	0/0:20,0:20:60.21:0,60,1478	0/0:11,0:11:30.10:0,30,737	0/0:39,0:39:99:0,111,2734	0/0:12,0:12:36.12:0,36,849	0/0:19,0:19:57.19:0,57,1343	0/0:15,0:15:45.14:0,45,1050	0/0:1,0:1:3.01:0,3,74
chr10	101576865	.	GAGAAGGA	G	538.01	PASS	AB=0.970;AC=7;AF=0.130;AN=54;BaseQRankSum=5.744;DP=471;FS=0.000;HRun=0;HaplotypeScore=142.4292;InbreedingCoeff=0.7695;MQ=75.40;MQ0=2;MQRankSum=-3.523;QD=11.70;ReadPosRankSum=-1.003;VQSLOD=2.6373;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,1:7:13.86:294,14,0	1/1:1,2:3:6.02:140,6,0	0/0:27,0:20:45.60:0,46,1416	0/1:31,0:18:5.68:6,0,335	0/0:12,0:12:33.11:0,33,1218	0/0:12,0:12:33.58:0,34,1257	0/0:12,0:12:36.12:0,36,1408	0/0:4,0:4:5.99:0,6,141	0/0:18,0:18:54.18:0,54,2027	0/0:23,0:23:63.22:0,63,2442	0/0:16,0:16:48.16:0,48,1730	0/0:21,0:21:62.70:0,63,2382	0/0:16,0:16:48.16:0,48,1872	0/0:19,0:19:57.20:0,57,2108	0/0:24,0:24:69.24:0,69,2539	1/1:2,1:3:9.03:226,9,0	0/0:32,0:32:87.27:0,87,3154	0/0:15,0:15:39.13:0,39,1522	0/0:13,0:13:39.13:0,39,1462	0/0:15,0:14:42.13:0,42,1356	0/0:27,0:27:75.26:0,75,2857	0/0:22,0:22:63.22:0,63,2384	0/0:12,0:12:30.09:0,30,1102	0/0:40,0:40:99:0,120,4492	0/0:10,0:10:30.10:0,30,1152	0/0:21,0:21:54.19:0,54,2054	0/0:13,0:13:39.13:0,39,1469	./.
chr10	101577495	.	T	TTCTTTCTCCATGTTAATATCCCAT	2808.70	PASS	AB=0.802;AC=12;AF=0.857;AN=14;BaseQRankSum=-1.828;DP=32;FS=3.074;HRun=0;HaplotypeScore=33.8405;MQ=202.40;MQ0=0;MQRankSum=-0.052;QD=108.03;ReadPosRankSum=-0.992;VQSLOD=2.8456;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:8,1:11:1.36:1519,0,1	0/1:7,0:9:19.38:1061,0,19	./.	./.	1/1:2,0:2:6.02:99,6,0	./.	./.	./.	./.	./.	1/1:1,0:1:3.01:79,3,0	./.	./.	1/1:1,0:1:2.98:21,3,0	./.	./.	1/1:1,0:1:3.01:55,3,0	./.	./.	./.	./.	./.	./.	./.	1/1:1,0:1:3.01:49,3,0	./.
chr10	101577752	.	T	TG	6644.11	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-12.179;DP=678;FS=6.508;HRun=1;HaplotypeScore=67.9775;InbreedingCoeff=0.9992;MQ=82.80;MQ0=0;MQRankSum=-1.758;QD=42.32;ReadPosRankSum=0.656;VQSLOD=5.1539;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,1811	0/0:17,0:17:51.12:0,51,642	0/0:22,0:22:61.44:0,61,781	0/0:21,0:21:53.18:0,53,675	0/0:30,0:30:81.18:0,81,1012	0/0:24,0:24:69.18:0,69,876	0/0:28,0:28:78.24:0,78,997	1/1:1,21:22:60.19:878,60,0	0/0:30,0:30:84.23:0,84,1071	0/0:26,0:26:75.23:0,75,958	0/0:23,0:23:69.21:0,69,878	0/0:21,0:21:63.20:0,63,812	0/0:20,0:20:57.19:0,57,739	0/0:16,0:16:42.09:0,42,526	0/0:31,0:31:93.26:0,93,1187	0/0:24,0:24:69.15:0,69,856	0/0:24,0:24:72.23:0,72,933	0/0:12,0:12:36.12:0,36,467	1/1:0,18:18:54.18:809,54,0	1/1:1,22:23:63.21:943,63,0	1/1:2,21:23:57.19:854,57,0	0/0:23,0:23:66.21:0,66,854	0/0:26,0:26:66.18:0,66,837	0/0:26,0:26:72.23:0,72,935	0/0:28,0:28:81.20:0,81,1016	1/1:0,27:27:81.26:1191,81,0	1/1:0,37:37:99:1654,111,0	1/1:0,7:7:21.07:315,21,0
chr10	101578587	.	TACACACAC	T	2337.86	PASS	AB=0.813;AC=14;AF=0.250;AN=56;BaseQRankSum=5.664;DP=606;FS=8.041;HRun=0;HaplotypeScore=154.0238;InbreedingCoeff=0.6581;MQ=66.47;MQ0=12;MQRankSum=-8.271;QD=15.90;ReadPosRankSum=1.459;VQSLOD=2.5235;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:39:24.53:0,25,744	0/0:9,0:9:5.99:0,6,230	0/0:35,0:21:6:0,6,86	0/1:24,0:17:9.10:9,0,20	0/0:30,0:30:9.98:0,10,437	0/0:16,0:18:18.06:0,18,671	0/0:19,0:21:45.15:0,45,1702	1/1:22,0:21:9.02:132,9,0	0/0:20,0:20:39.09:0,39,1348	0/0:24,0:33:75.15:0,75,2605	0/0:18,0:20:39.13:0,39,1323	0/0:21,0:21:9.03:0,9,326	0/0:19,0:22:12.04:0,12,446	0/0:15,0:15:2.96:0,3,61	0/0:23,0:26:48.16:0,48,1818	0/0:5,0:13:15.05:0,15,542	0/0:25,0:25:51.18:0,51,1938	0/0:10,0:21:39.10:0,39,933	1/1:7,0:8:2.90:16,3,0	1/1:8,9:18:29.68:556,30,0	1/1:10,11:22:5.74:151,6,0	0/0:22,0:22:30.10:0,30,1144	0/0:17,0:15:30.10:0,30,1159	0/0:27,0:27:60.21:0,60,2279	0/0:20,0:22:48.16:0,48,1838	0/1:10,14:25:77.54:782,0,78	1/1:10,8:19:21.07:490,21,0	1/1:3,6:9:15.05:376,15,0
chr10	101579919	.	T	TAA	3673.13	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.534;DP=647;FS=4.661;HRun=9;HaplotypeScore=103.8247;InbreedingCoeff=0.9835;MQ=75.47;MQ0=0;MQRankSum=-1.963;QD=34.98;ReadPosRankSum=1.766;VQSLOD=3.5066;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:35:79.59:0,80,347	0/0:2,0:8:13.72:0,14,60	0/0:12,0:13:33.03:0,33,331	0/0:12,0:11:24.04:0,24,252	1/1:7,27:36:90.22:1305,90,0	0/0:28,0:28:66:0,66,685	0/0:27,0:26:54.05:0,54,566	0/0:30,0:30:57.08:0,57,597	0/0:12,0:12:33.07:0,33,343	0/0:44,0:44:99:0,102,1085	0/0:25,0:25:63.11:0,63,670	1/1:2,19:24:56.16:802,56,0	1/1:1,22:24:66.18:989,66,0	1/1:4,16:21:39.13:577,39,0	0/0:32,0:32:84.13:0,84,876	0/0:2,0:23:57.62:0,58,251	0/0:24,0:25:71.88:0,72,728	0/0:8,0:8:21.05:0,21,223	0/0:20,0:20:54.12:0,54,568	0/0:23,0:23:60.13:0,60,631	0/0:9,0:9:27.07:0,27,287	0/0:32,0:32:87.17:0,87,916	0/0:22,0:22:48.06:0,48,503	0/0:24,0:24:69.13:0,69,722	0/0:21,0:22:56.85:0,57,575	0/0:35,0:35:90.19:0,90,949	0/0:29,0:29:75.15:0,75,782	0/0:4,0:4:12.03:0,12,128
chr10	101579939	.	TG	T	5766.73	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=8.063;DP=618;FS=2.407;HRun=2;HaplotypeScore=86.8541;InbreedingCoeff=0.9821;MQ=81.42;MQ0=0;MQRankSum=-3.336;QD=34.53;ReadPosRankSum=-1.786;VQSLOD=4.4394;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1411	0/0:7,0:7:21.07:0,21,313	0/0:15,0:15:44.74:0,45,616	0/0:16,0:16:38.31:0,38,620	0/0:31,0:31:93.32:0,93,1392	0/0:27,0:27:78.26:0,78,1161	0/0:17,0:17:51.17:0,51,763	1/1:0,35:35:99:1294,105,0	0/0:15,0:15:45.15:0,45,672	0/0:38,0:38:99:0,114,1667	0/0:24,0:24:72.21:0,72,1037	0/0:20,0:20:54.17:0,54,789	0/0:27,0:27:72.24:0,72,1078	0/0:17,0:17:42.14:0,42,626	0/0:30,0:30:90.29:0,90,1309	0/0:20,0:20:57.18:0,57,836	0/0:24,0:24:69.21:0,69,988	1/1:0,6:6:15.05:195,15,0	1/1:0,18:18:54.12:653,54,0	1/1:2,21:23:57.18:735,57,0	1/1:0,12:12:33.11:428,33,0	0/0:34,0:34:99:0,99,1480	0/0:15,1:16:9.20:0,9,614	0/0:24,0:24:72.23:0,72,1055	0/0:15,0:15:42.13:0,42,610	1/1:2,32:34:54.32:1181,54,0	1/1:0,35:35:87.28:1125,87,0	1/1:0,4:4:12.04:156,12,0
chr10	101580484	.	CACTCTCTT	C	3076.07	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=6.165;DP=500;FS=11.355;HRun=0;HaplotypeScore=158.7414;InbreedingCoeff=0.4867;MQ=75.52;MQ0=6;MQRankSum=-5.434;QD=17.99;ReadPosRankSum=-1.433;VQSLOD=2.3176;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.08:0,57,888	0/0:7,0:7:21.06:0,21,423	0/0:37,0:26:61.96:0,62,1232	0/0:45,0:26:71.39:0,71,1052	1/1:17,0:15:27.06:392,27,0	0/0:23,0:22:53.73:0,54,788	0/0:10,0:10:30.10:0,30,522	1/1:0,23:23:63.60:889,64,0	0/0:19,0:19:47.70:0,48,813	0/0:16,0:16:42.48:0,42,729	0/0:17,0:17:41.82:0,42,629	0/1:12,0:12:11.82:233,0,12	1/1:8,0:9:14.99:167,15,0	1/1:10,0:12:8.96:100,9,0	0/0:20,0:21:24.75:0,25,889	0/0:16,0:16:29.57:0,30,1127	0/0:21,0:21:54.16:0,54,985	0/1:13,0:12:52.73:53,0,137	0/1:8,0:8:13.52:208,0,14	1/1:21,0:20:24.06:356,24,0	1/1:8,0:8:6.01:74,6,0	0/0:17,0:17:39.01:0,39,523	0/0:12,0:12:33.03:0,33,613	0/0:19,0:19:43.34:0,43,930	0/0:28,0:28:55.46:0,55,1257	0/1:16,0:16:99:137,0,321	0/1:20,0:20:99:373,0,152	0/1:12,0:11:15.39:286,0,15
chr10	101580492	.	TTC	T	760.49	PASS	AB=0.940;AC=20;AF=0.435;AN=46;BaseQRankSum=-5.088;DP=566;FS=28.831;HRun=0;HaplotypeScore=143.1805;InbreedingCoeff=0.4645;MQ=64.33;MQ0=16;MQRankSum=6.453;QD=3.46;ReadPosRankSum=4.324;VQSLOD=1.2125;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:22:8.20:65,8,0	0/1:7,0:7:18.21:18,0,19	./.	./.	0/0:20,0:18:0:0,0,1	1/1:22,1:23:14.37:95,14,0	1/1:10,0:10:2.95:20,3,0	0/0:43,0:41:25.43:0,25,133	1/1:18,0:18:19.27:131,19,0	1/1:8,0:13:11.75:79,12,0	0/1:13,6:19:0.07:0,0,0	0/0:16,0:15:0.88:0,1,17	0/0:19,0:18:7.97:0,8,41	./.	1/1:21,0:20:17.41:123,17,0	0/0:20,0:20:1.26:0,1,162	1/1:25,0:24:21.42:168,21,0	0/0:14,0:13:8.67:0,9,51	0/0:14,0:14:5.85:0,6,34	./.	./.	0/0:16,0:16:2.94:0,3,18	0/1:12,0:11:15.97:36,0,16	0/1:23,0:22:63.76:67,0,64	1/1:25,0:25:14.87:115,15,0	0/0:22,0:19:29.71:0,30,196	0/0:24,0:22:23.25:0,23,145	0/0:14,0:12:5.89:0,6,37
chr10	101580561	.	ACACACACACACACC	A	2738.20	PASS	AB=0.900;AC=15;AF=0.288;AN=52;BaseQRankSum=3.109;DP=450;FS=0.000;HRun=0;HaplotypeScore=170.1034;InbreedingCoeff=0.5178;MQ=51.67;MQ0=27;MQRankSum=-3.710;QD=21.73;ReadPosRankSum=0.195;VQSLOD=2.5752;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:52.45:0,52,2448	0/0:5,0:5:9.92:0,10,479	0/0:15,0:12:26.93:0,27,413	0/0:16,0:7:4.29:0,4,146	./.	0/0:19,0:18:38.37:0,38,1429	0/0:19,0:19:45.48:0,45,1926	1/1:15,0:14:32.91:331,33,0	0/0:17,0:14:28.44:0,28,1168	0/0:18,0:18:50.47:0,50,1562	0/0:24,0:23:41.66:0,42,2090	1/1:1,14:14:5.72:252,6,0	1/1:6,14:18:12.49:500,12,0	./.	0/0:20,0:20:36.12:0,36,1630	0/0:13,0:13:24.08:0,24,1336	0/0:29,0:28:70.05:0,70,3148	0/1:7,0:7:21.65:22,0,45	0/1:6,0:6:28.60:53,0,29	0/1:15,2:17:0:0,0,0	0/1:9,0:5:13.54:19,0,14	0/0:14,0:14:18:0,18,990	0/0:15,0:15:32.23:0,32,1480	0/0:24,0:23:48.52:0,49,1830	0/0:12,0:12:27.56:0,28,1414	0/1:6,11:14:99:925,0,339	1/1:12,1:13:23.63:646,24,0	1/1:2,5:6:6.02:158,6,0
chr10	101580563	.	ACACACACACACC	A	2581.57	PASS	AB=1.000;AC=16;AF=0.320;AN=50;BaseQRankSum=3.206;DP=441;FS=2.064;HRun=0;HaplotypeScore=156.4740;InbreedingCoeff=0.6992;MQ=53.84;MQ0=27;MQRankSum=-3.300;QD=24.82;ReadPosRankSum=0.103;VQSLOD=2.8269;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:52.02:0,52,2080	0/0:5,0:5:9.92:0,10,417	0/0:17,0:14:32.96:0,33,422	0/0:16,0:7:4.28:0,4,109	./.	0/0:18,0:17:38.35:0,38,1183	0/0:19,0:19:45:0,45,1619	1/1:16,0:15:38.93:336,39,0	0/0:17,0:14:27.85:0,28,970	0/0:17,0:17:47.85:0,48,1268	0/0:24,0:23:41.65:0,42,1790	1/1:15,0:14:5.80:214,6,0	1/1:17,0:15:12.04:425,12,0	./.	0/0:19,0:19:36.12:0,36,1350	0/0:13,0:13:24.08:0,24,1134	0/0:30,0:29:72.94:0,73,2704	0/1:7,0:7:17.35:17,0,59	1/1:5,0:5:6.22:65,6,0	./.	1/1:8,1:5:6.46:51,6,0	0/0:14,0:14:17.80:0,18,847	0/0:15,0:15:31.87:0,32,1250	0/0:24,0:23:48.52:0,49,1555	0/0:12,0:12:27.08:0,27,1211	0/1:16,0:13:99:782,0,287	1/1:7,5:12:23.77:720,24,0	1/1:7,0:6:6.02:147,6,0
chr10	101580573	.	ACC	A	1128.62	PASS	AB=1.000;AC=17;AF=0.327;AN=52;BaseQRankSum=4.061;DP=428;FS=6.660;HRun=4;HaplotypeScore=96.1483;InbreedingCoeff=0.8062;MQ=62.63;MQ0=21;MQRankSum=-4.483;QD=9.33;ReadPosRankSum=0.220;VQSLOD=-0.1989;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:52.77:0,53,619	0/0:5,0:5:9.43:0,9,107	0/0:23,0:19:46.04:0,46,471	0/0:17,0:8:7.26:0,7,116	1/1:21,1:21:0.88:2,1,0	0/0:17,0:16:35.20:0,35,381	0/0:20,0:20:48.38:0,48,519	1/1:20,0:19:50.91:438,51,0	0/0:15,0:12:24.51:0,25,297	0/0:20,0:20:47.42:0,47,465	0/0:20,0:20:43.29:0,43,512	1/1:14,0:14:5.55:47,6,0	1/1:16,0:14:11.93:91,12,0	./.	0/0:16,0:16:36.93:0,37,388	0/0:12,0:12:24.05:0,24,315	0/0:28,0:27:71:0,71,796	0/0:7,0:7:17.93:0,18,143	1/1:0,7:7:17.95:144,18,0	./.	1/1:10,0:7:17.96:145,18,0	0/0:13,0:13:27.41:0,27,303	0/0:13,0:13:30.87:0,31,330	0/0:20,0:19:47.94:0,48,482	0/0:10,0:10:27.06:0,27,346	0/1:14,0:13:26.83:203,0,27	1/1:10,1:11:23.95:198,24,0	1/1:7,0:6:5.96:44,6,0
chr10	101581458	.	A	AT	8531.04	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=19.787;DP=668;FS=8.816;HRun=6;HaplotypeScore=116.8568;InbreedingCoeff=0.9962;MQ=86.49;MQ0=0;MQRankSum=-3.476;QD=32.44;ReadPosRankSum=-0.232;VQSLOD=3.1992;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,162,1644	0/0:16,0:16:48.11:0,48,490	0/0:19,1:20:16.82:0,17,414	0/0:27,0:27:69.11:0,69,685	1/1:3,22:25:57.14:699,57,0	0/0:20,0:20:53.32:0,53,521	0/0:24,0:24:60.13:0,60,612	1/1:2,27:29:81.26:1018,81,0	0/0:18,0:18:54.09:0,54,541	0/0:21,0:21:60.14:0,60,612	0/0:19,0:19:57.13:0,57,582	1/1:1,18:19:51.16:641,51,0	1/1:1,28:29:78.25:981,78,0	1/1:0,17:17:51.16:637,51,0	0/0:33,0:33:84.18:0,84,857	0/0:20,0:20:60.12:0,60,604	0/0:28,1:29:43.44:0,43,758	1/1:1,12:13:30.10:377,30,0	1/1:5,19:24:54.17:679,54,0	1/1:4,23:27:69.18:850,69,0	1/1:3,28:31:81.26:1019,81,0	0/0:27,0:27:78.15:0,78,783	0/0:27,0:27:72.16:0,72,734	0/0:29,0:29:81.18:0,81,826	0/0:18,0:18:51.12:0,51,520	1/1:1,19:21:32.59:722,33,0	1/1:2,19:21:57.18:717,57,0	1/1:2,5:7:15.05:189,15,0
chr10	101582130	.	T	TC	11151.66	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=15.728;DP=786;FS=7.344;HRun=2;HaplotypeScore=130.9427;InbreedingCoeff=0.9994;MQ=82.74;MQ0=0;MQRankSum=-2.822;QD=34.63;ReadPosRankSum=1.210;VQSLOD=3.7633;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:67,0:67:99:0,190,2312	0/0:12,0:12:33.10:0,33,409	0/0:19,0:19:53.98:0,54,573	0/0:32,0:32:80.03:0,80,886	1/1:2,22:24:57.19:812,57,0	0/0:19,0:18:54.17:0,54,669	0/0:23,0:23:66.19:0,66,806	1/1:4,30:34:90.29:1274,90,0	0/0:43,0:43:99:0,129,1572	0/0:25,0:25:72.23:0,72,893	0/0:19,0:19:54.17:0,54,667	1/1:6,32:38:84.28:1209,84,0	1/1:2,23:25:57.19:819,57,0	1/1:4,28:32:78.26:1123,78,0	0/0:40,0:39:99:0,111,1376	0/0:45,0:45:99:0,129,1574	0/0:22,0:22:63.20:0,63,780	1/1:1,23:24:63.21:907,63,0	1/1:7,22:29:63.19:887,63,0	1/1:1,26:27:75.25:1078,75,0	1/1:5,31:36:78:1123,78,0	0/0:18,0:18:54.15:0,54,646	0/0:19,0:19:54.17:0,54,669	0/0:35,0:35:99:0,99,1212	0/0:26,0:26:75.24:0,75,929	1/1:1,22:23:60.18:841,60,0	1/1:2,20:22:54.18:777,54,0	1/1:1,7:8:21.07:302,21,0
chr10	101587799	.	CT	C	1338.34	PASS	AB=0.755;AC=28;AF=0.500;AN=56;BaseQRankSum=4.547;DP=475;FS=1.635;HRun=15;HaplotypeScore=70.8759;InbreedingCoeff=0.5306;MQ=67.66;MQ0=9;MQRankSum=-0.396;QD=4.70;ReadPosRankSum=0.672;VQSLOD=1.8803;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,1:22:17.73:62,18,0	0/1:1,0:4:4.67:5,0,19	0/0:23,0:9:1.52:0,2,13	0/1:21,0:13:5.14:5,0,55	1/1:8,0:13:8.12:23,8,0	0/0:16,0:15:23.78:0,24,190	0/0:20,0:20:26.07:0,26,236	1/1:9,10:21:17.19:167,17,0	0/1:10,1:11:22.65:23,0,66	0/0:14,1:15:7.72:0,8,190	0/0:11,0:9:20.97:0,21,177	1/1:5,0:16:21.93:63,22,0	1/1:2,0:12:16.05:47,16,0	1/1:3,0:15:16.28:47,16,0	0/0:12,0:13:17.82:0,18,142	1/1:5,0:14:16.05:46,16,0	0/0:24,1:25:46.12:0,46,484	1/1:7,16:21:29.39:192,29,0	1/1:9,9:17:29.25:182,29,0	0/1:14,3:18:31.68:122,0,32	1/1:9,13:22:21.91:150,22,0	0/0:17,0:16:35.89:0,36,300	0/0:13,0:14:18.72:0,19,145	0/0:16,0:19:38.62:0,39,306	0/0:14,0:14:35.30:0,35,285	0/1:10,14:25:29.54:205,0,30	0/1:6,11:18:15.73:126,0,16	1/1:3,4:8:4.70:75,5,0
chr10	101587819	.	C	CT	425.49	PASS	AB=0.874;AC=9;AF=0.161;AN=56;BaseQRankSum=1.796;DP=459;FS=1.784;HRun=9;HaplotypeScore=68.8636;InbreedingCoeff=0.5242;MQ=53.82;MQ0=10;MQRankSum=-0.917;QD=5.75;ReadPosRankSum=-1.494;VQSLOD=0.5897;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,13:20:7.02:297,7,0	1/1:3,1:4:3.01:33,3,0	1/1:9,0:2:2.37:8,2,0	0/0:11,0:6:10.86:0,11,65	0/0:16,0:13:20.98:0,21,182	0/0:17,0:16:30.32:0,30,253	0/0:18,0:16:17.96:0,18,156	0/0:26,0:26:44.95:0,45,389	0/1:12,1:13:16.09:16,0,112	0/0:19,0:19:35.96:0,36,309	0/0:12,0:10:20.88:0,21,177	0/0:16,0:15:32.91:0,33,279	0/0:16,0:16:26.95:0,27,227	0/0:16,0:16:23.88:0,24,191	0/0:10,0:10:13.98:0,14,129	0/1:10,8:17:2.01:193,0,2	0/0:27,0:26:44.26:0,44,359	0/0:22,0:20:35.57:0,36,312	0/0:16,0:14:20.31:0,20,163	0/0:18,0:19:40.29:0,40,314	0/0:16,0:18:10.92:0,11,104	0/0:15,0:15:19.34:0,19,160	0/1:10,0:10:3.27:3,0,135	0/0:22,0:22:35.92:0,36,311	0/0:16,0:16:32.80:0,33,274	0/0:21,0:21:35.96:0,36,312	0/0:19,0:19:32.92:0,33,277	0/0:13,0:11:23.97:0,24,203
chr10	101589952	.	ACT	A	291.15	PASS	AB=0.973;AC=9;AF=0.161;AN=56;BaseQRankSum=7.715;DP=448;FS=18.984;HRun=0;HaplotypeScore=93.1342;InbreedingCoeff=0.0395;MQ=65.06;MQ0=4;MQRankSum=-4.845;QD=2.45;ReadPosRankSum=-3.010;VQSLOD=-0.1424;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:31.92:186,0,32	0/0:12,0:12:19.95:0,20,252	0/0:19,0:15:45.10:0,45,791	0/0:25,0:19:44.75:0,45,923	0/0:23,0:23:38.77:0,39,665	0/0:21,0:21:59.94:0,60,982	0/0:21,0:21:54.18:0,54,881	0/0:23,0:23:2.89:0,3,89	0/0:16,0:16:48.16:0,48,801	0/0:14,0:14:42.14:0,42,781	0/0:11,0:11:17.93:0,18,289	0/0:18,0:18:51.17:0,51,829	0/0:16,0:16:35.95:0,36,481	0/0:11,0:11:27.09:0,27,446	0/0:12,0:12:36.07:0,36,562	0/1:13,0:13:34.17:34,0,70	0/0:14,0:14:30.10:0,30,517	0/0:11,0:11:14.80:0,15,273	1/1:6,1:6:2.60:34,3,0	0/1:13,4:16:54.03:54,0,131	0/1:13,0:11:5.84:86,0,6	0/0:10,0:10:27.09:0,27,509	0/0:13,0:13:33.86:0,34,543	0/0:29,0:27:60.07:0,60,1001	0/0:10,0:10:30.09:0,30,503	0/1:24,0:24:5.09:5,0,239	0/1:12,0:12:9.33:9,0,79	0/1:11,0:11:15.15:15,0,87
chr10	101589954	.	T	TAC	431.99	PASS	AB=0.957;AC=9;AF=0.173;AN=52;BaseQRankSum=1.602;DP=477;FS=0.000;HRun=0;HaplotypeScore=104.3001;InbreedingCoeff=0.2631;MQ=62.00;MQ0=9;MQRankSum=0.463;QD=3.63;ReadPosRankSum=0.137;VQSLOD=1.6243;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:8.38:0,8,72	0/0:14,0:14:19.08:0,19,229	./.	./.	0/0:17,6:23:2.90:0,3,33	0/1:17,1:19:3.87:4,0,310	0/0:22,0:22:9.02:0,9,99	0/0:23,0:23:8.92:0,9,70	0/1:17,0:17:14.53:15,0,104	0/0:18,0:18:15.02:0,15,157	0/0:12,0:12:5.95:0,6,51	0/1:20,0:20:1.42:358,0,1	0/1:16,4:20:7.33:76,0,7	1/1:15,0:15:8.92:65,9,0	0/0:10,0:10:8.86:0,9,80	0/0:13,0:13:11.87:0,12,113	0/1:17,0:17:7.53:8,0,118	1/1:10,0:11:6.38:37,6,0	0/0:7,0:6:2.84:0,3,14	0/0:16,0:15:18.02:0,18,186	0/0:14,0:11:3.01:0,3,33	0/0:12,0:12:18.05:0,18,200	0/0:13,0:14:14.69:0,15,115	0/0:30,0:29:26.90:0,27,280	0/0:10,0:10:9.02:0,9,96	0/0:26,0:25:20.80:0,21,177	0/0:13,0:12:12.03:0,12,126	0/0:11,0:11:9.02:0,9,96
chr10	101589992	.	CAG	C	624.45	PASS	AB=0.778;AC=21;AF=0.457;AN=46;BaseQRankSum=-0.130;DP=468;FS=1.050;HRun=0;HaplotypeScore=106.8296;InbreedingCoeff=0.3476;MQ=45.84;MQ0=23;MQRankSum=3.275;QD=2.15;ReadPosRankSum=1.962;VQSLOD=2.1662;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:29:0.23:1,0,0	0/1:13,0:13:8.37:8,0,15	./.	./.	0/0:20,0:19:6.02:0,6,87	1/1:27,2:28:24.34:196,24,0	0/1:13,6:18:0:0,0,0	0/0:12,0:11:0:0,0,0	0/1:7,3:9:0.01:0,0,0	1/1:17,7:24:16.41:128,16,0	1/1:12,9:19:2.83:22,3,0	0/0:18,0:18:0.47:0,0,1	0/0:19,0:19:10.48:0,10,95	0/0:15,0:15:3.01:0,3,44	0/1:9,5:15:27.51:28,0,39	0/0:12,0:12:2.99:0,3,23	1/1:10,11:22:8.75:81,9,0	0/0:6,0:5:3.01:0,3,40	./.	0/0:20,0:19:0:0,0,0	./.	1/1:10,14:25:0.38:1,0,0	1/1:22,0:21:20.80:199,21,0	0/1:19,23:39:15.45:57,0,15	1/1:8,6:13:3.01:33,3,0	0/0:25,0:22:21.32:0,21,185	0/0:10,0:9:5.93:0,6,54	./.
chr10	101590024	.	GAGAGAGAA	G	58.36	PASS	AB=0.889;AC=8;AF=0.148;AN=54;BaseQRankSum=1.812;DP=515;FS=0.000;HRun=0;HaplotypeScore=124.1548;InbreedingCoeff=0.5322;MQ=56.08;MQ0=20;MQRankSum=-2.145;QD=1.10;ReadPosRankSum=-0.119;VQSLOD=2.2530;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,22:30:0.71:0,1,2	1/1:8,1:9:7.73:110,8,0	0/0:30,0:15:17.89:0,18,332	0/0:57,0:19:30.84:0,31,380	0/0:19,0:19:31.46:0,31,526	0/0:34,0:33:57.59:0,58,768	0/0:23,0:22:14.57:0,15,267	0/1:1,0:1:0:0,0,0	0/0:13,0:12:13.43:0,13,112	0/0:25,0:25:38.29:0,38,700	0/0:21,0:20:32.63:0,33,260	0/0:14,0:14:20.93:0,21,262	0/0:26,0:25:40.76:0,41,702	0/0:17,0:17:32.92:0,33,428	0/0:19,0:19:25.59:0,26,368	0/1:3,12:15:0.16:13,0,0	0/1:22,0:22:27.30:27,0,354	0/0:5,0:4:9.01:0,9,241	1/1:5,0:3:3.84:22,4,0	0/0:11,0:10:0.47:0,0,1	./.	0/0:21,0:21:32.72:0,33,247	0/0:20,0:18:33.52:0,34,635	0/0:35,0:34:2.86:0,3,337	0/0:15,0:14:18.03:0,18,280	0/0:14,0:13:30.78:0,31,597	0/0:8,0:7:9.24:0,9,177	0/1:1,0:1:0:0,0,0
chr10	101590028	.	GAGAA	G	264.30	PASS	AB=0.993;AC=12;AF=0.240;AN=50;BaseQRankSum=3.919;DP=506;FS=4.357;HRun=0;HaplotypeScore=110.8272;InbreedingCoeff=0.2894;MQ=57.17;MQ0=17;MQRankSum=-1.413;QD=1.59;ReadPosRankSum=0.555;VQSLOD=2.0992;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:0.57:1,0,1	1/1:8,0:8:7.95:81,8,0	0/0:30,0:15:17.66:0,18,332	0/0:61,0:22:33.11:0,33,410	0/0:20,0:20:33.48:0,33,397	0/1:33,0:32:99:141,0,359	0/0:21,2:23:17.07:0,17,238	./.	0/0:11,1:11:12.31:0,12,110	0/1:23,1:24:63.98:64,0,352	0/0:19,0:18:14.53:0,15,225	0/0:11,0:11:23.78:0,24,184	0/0:30,0:29:14.91:0,15,560	0/0:16,0:16:32.90:0,33,326	0/0:19,1:20:31.81:0,32,325	1/1:15,0:15:2.90:18,3,0	0/0:23,0:23:23.54:0,24,270	0/0:5,0:4:9.01:0,9,148	1/1:5,0:3:3.85:22,4,0	0/0:7,0:7:0.47:0,0,1	./.	0/0:24,0:24:41.64:0,42,329	0/0:20,0:18:16.43:0,16,279	0/1:33,0:32:14.98:15,0,148	0/0:15,0:14:20.97:0,21,206	0/1:12,0:12:51.15:51,0,171	0/1:8,0:7:7.76:8,0,46	./.
chr10	101590205	.	AAT	A	659.15	PASS	AC=2;AF=0.045;AN=44;BaseQRankSum=3.795;DP=447;FS=0.878;HRun=0;HaplotypeScore=80.4720;InbreedingCoeff=0.8782;MQ=97.76;MQ0=0;MQRankSum=-1.967;QD=32.96;ReadPosRankSum=0.903;VQSLOD=5.8231;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.25:0,81,1390	0/0:5,0:5:12.04:0,12,214	0/0:22,0:22:40.44:0,40,849	0/0:23,0:23:66.13:0,66,1002	0/0:29,0:29:81.28:0,81,1449	0/0:29,0:29:72.18:0,72,1170	0/0:16,0:16:45.15:0,45,794	./.	0/0:14,0:14:39.13:0,39,696	0/0:25,0:25:72.22:0,72,1209	0/0:24,0:24:60.21:0,60,1071	0/0:15,0:15:42.13:0,42,714	0/0:31,0:31:90.31:0,90,1602	0/0:20,0:20:54.17:0,54,923	0/0:25,0:25:72.21:0,72,1178	0/0:20,0:19:60.21:0,60,1070	0/0:25,0:25:69.21:0,69,1202	1/1:0,20:20:54.18:752,54,0	./.	./.	./.	0/0:21,0:21:60.19:0,60,1042	0/0:14,0:14:42.10:0,42,664	0/0:12,0:12:27.09:0,27,483	0/0:26,0:26:75.22:0,75,1246	0/0:2,0:2:6.02:0,6,107	./.	./.
chr10	101590276	.	G	GC	8763.48	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=16.860;DP=570;FS=15.746;HRun=1;HaplotypeScore=77.8904;InbreedingCoeff=0.9785;MQ=66.94;MQ0=0;MQRankSum=-2.422;QD=43.60;ReadPosRankSum=0.489;VQSLOD=2.9840;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,47:47:99:2205,138,0	1/1:1,10:11:21.07:336,21,0	0/0:5,0:5:8.05:0,8,73	0/0:6,0:6:11.40:0,11,82	0/0:22,0:22:63.21:0,63,879	0/0:21,0:21:60.20:0,60,838	0/0:25,0:25:75.25:0,75,1047	1/1:1,20:21:60.20:950,60,0	0/0:24,0:24:66.22:0,66,922	0/0:25,0:25:75.25:0,75,1048	0/0:13,0:13:39.11:0,39,525	0/0:19,0:19:54.18:0,54,755	0/0:27,0:27:81.27:0,81,1129	0/0:25,0:25:72.24:0,72,1007	0/0:35,0:35:99:0,105,1451	1/1:0,23:23:66.23:1055,66,0	0/0:29,0:29:84.26:0,84,1156	0/0:16,0:16:45.15:0,45,629	1/1:2,7:9:21.05:312,21,0	1/1:0,19:19:54.18:862,54,0	1/1:2,17:19:42.14:671,42,0	0/0:18,0:18:54.18:0,54,750	0/0:28,0:28:81.24:0,81,1085	0/0:13,0:13:39.09:0,39,523	0/0:18,0:18:54.18:0,54,755	1/1:0,20:20:57.18:886,57,0	1/1:1,26:26:81.28:1293,81,0	1/1:0,5:5:12.04:192,12,0
chr10	101590676	.	TG	T	6192.34	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=12.966;DP=668;FS=0.992;HRun=7;HaplotypeScore=69.0397;InbreedingCoeff=0.9997;MQ=82.34;MQ0=0;MQRankSum=-2.493;QD=25.91;ReadPosRankSum=-1.035;VQSLOD=4.9935;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:22:51.09:511,51,0	1/1:2,8:10:27.06:274,27,0	0/0:30,0:30:54.73:0,55,741	0/0:27,0:27:62.39:0,62,681	0/0:25,0:25:66.18:0,66,792	0/0:27,0:27:75.23:0,75,930	0/0:22,0:22:63.18:0,63,769	1/1:1,28:29:84.16:843,84,0	0/0:30,0:30:81.24:0,81,989	0/0:30,0:30:87.28:0,87,1083	0/0:29,0:29:87.28:0,87,1087	0/0:21,0:21:60.19:0,60,754	0/0:16,0:16:39.12:0,39,491	0/0:28,0:28:81.24:0,81,995	0/0:29,0:29:87.27:0,87,1083	1/1:0,23:23:69.16:704,69,0	0/0:18,0:18:51.15:0,51,624	1/1:4,17:21:41.72:428,42,0	1/1:4,24:28:66.12:662,66,0	1/1:3,20:23:60.13:610,60,0	1/1:0,10:10:27.06:275,27,0	0/0:26,0:26:75.24:0,75,942	0/0:25,0:25:72.22:0,72,893	0/0:17,0:17:48.11:0,48,586	0/0:29,0:29:84.27:0,84,1056	1/1:4,27:31:46.44:783,46,0	1/1:1,24:25:69.16:703,69,0	1/1:2,15:17:39.09:398,39,0
chr10	101590895	.	C	CAG	10268.16	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=6.208;DP=587;FS=1.891;HRun=0;HaplotypeScore=94.0227;InbreedingCoeff=0.9967;MQ=90.85;MQ0=0;MQRankSum=-5.250;QD=48.90;ReadPosRankSum=0.035;VQSLOD=5.5287;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:36.12:675,36,0	1/1:0,13:13:36.12:675,36,0	0/0:28,0:28:75.15:0,75,1079	0/0:22,0:22:54.15:0,54,800	0/0:28,0:28:81.28:0,81,1240	0/0:29,0:29:87.28:0,87,1293	0/0:18,0:18:54.18:0,54,827	1/1:5,26:31:90.29:1655,90,0	0/0:28,0:28:84.26:0,84,1243	0/0:24,0:24:63.21:0,63,947	0/0:16,0:16:48.15:0,48,716	0/0:22,0:22:63.21:0,63,965	0/0:18,0:18:54.12:0,54,778	0/0:25,0:25:72.23:0,72,1079	0/0:30,0:30:87.30:0,87,1332	1/1:0,25:25:69.15:1313,69,0	0/0:22,0:22:63.21:0,63,945	1/1:0,9:9:24.08:463,24,0	1/1:3,14:17:39.13:754,39,0	1/1:2,17:19:51.17:945,51,0	1/1:1,13:14:30.10:575,30,0	0/0:10,0:10:27.08:0,27,393	0/0:16,0:16:48.16:0,48,733	0/0:17,0:17:48.16:0,48,735	0/0:24,0:24:69.23:0,69,1035	1/1:3,17:20:14.26:1034,14,0	1/1:1,27:27:72.20:1368,72,0	1/1:0,18:18:42.14:811,42,0
chr10	101592145	.	C	CA	8996.35	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-3.875;DP=774;FS=22.885;HRun=1;HaplotypeScore=101.3499;InbreedingCoeff=0.9993;MQ=84.19;MQ0=0;MQRankSum=-0.833;QD=42.84;ReadPosRankSum=-1.491;VQSLOD=2.4307;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,1656	0/0:8,0:8:24.08:0,24,312	0/0:20,0:20:54.12:0,54,665	0/0:29,0:28:78.11:0,78,932	0/0:29,0:29:87.26:0,87,1113	0/0:29,0:29:87.27:0,87,1114	0/0:22,0:22:63.18:0,63,802	1/1:1,30:31:93.30:1357,93,0	0/0:27,0:27:81.25:0,81,1035	0/0:38,0:38:99:0,114,1455	0/0:23,0:23:69.21:0,69,880	0/0:25,0:25:72.23:0,72,933	0/0:32,0:32:93.30:0,93,1207	0/0:25,0:25:75.24:0,75,973	0/0:44,0:43:99:0,132,1680	0/0:24,0:24:66.21:0,66,856	0/0:29,0:29:81.26:0,81,1052	0/0:14,0:14:42.14:0,42,545	1/1:1,24:25:75.23:1101,75,0	1/1:0,36:36:99:1459,99,0	1/1:0,32:32:93.32:1394,93,0	0/0:27,0:27:75.24:0,75,973	0/0:19,0:19:48.16:0,48,623	0/0:29,0:29:84.26:0,84,1075	0/0:26,0:26:78.25:0,78,1013	1/1:3,31:33:60.37:1392,60,0	1/1:0,44:44:99:1933,129,0	1/1:0,8:8:24.08:360,24,0
chr10	101592567	.	A	AT	8736.77	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=-12.998;DP=561;FS=4.461;HRun=0;HaplotypeScore=62.7956;InbreedingCoeff=0.8247;MQ=75.04;MQ0=0;MQRankSum=0.437;QD=31.54;ReadPosRankSum=1.002;VQSLOD=4.5921;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:2.36:0,2,42	0/1:7,0:7:6.08:6,0,23	0/0:28,0:21:24.89:0,25,265	0/0:16,0:13:28.71:0,29,274	1/1:0,28:28:84.07:1046,84,0	0/0:27,0:27:76.79:0,77,943	0/0:13,0:13:39.06:0,39,488	1/1:0,43:42:99:1544,129,0	0/0:21,0:21:55.87:0,56,770	0/0:29,0:29:87.22:0,87,1108	0/0:27,0:27:81.02:0,81,987	1/1:0,10:10:21.07:278,21,0	1/1:0,21:22:57.18:743,57,0	1/1:0,20:20:54.18:714,54,0	0/0:13,0:13:36.10:0,36,469	0/1:15,0:15:24.86:56,0,25	0/0:28,0:28:84.21:0,84,1093	1/1:1,0:8:7.21:58,7,0	1/1:2,26:28:80:988,80,0	1/1:3,27:30:74.42:922,74,0	1/1:0,4:4:12.04:159,12,0	0/0:19,0:19:50.40:0,50,610	0/0:7,0:7:17.94:0,18,207	0/0:13,0:13:39.12:0,39,524	0/0:20,0:20:53.44:0,53,719	1/1:1,27:28:81.20:1030,81,0	1/1:2,26:28:74.64:993,75,0	1/1:0,6:6:15.05:199,15,0
chr10	101593748	.	CA	C	12471.16	PASS	AB=0.551;AC=29;AF=0.518;AN=56;BaseQRankSum=20.625;DP=765;FS=3.898;HRun=4;HaplotypeScore=135.7500;InbreedingCoeff=0.9249;MQ=84.98;MQ0=0;MQRankSum=-3.100;QD=31.10;ReadPosRankSum=1.494;VQSLOD=3.2733;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,57:58:99:1820,156,0	1/1:0,12:12:32.69:384,33,0	0/0:22,0:22:60.19:0,60,798	0/0:24,0:24:50.32:0,50,715	1/1:0,16:16:48.14:560,48,0	0/0:24,0:24:72.23:0,72,990	0/0:44,0:44:99:0,123,1704	1/1:0,28:28:78.15:891,78,0	0/0:33,0:33:90.30:0,90,1259	0/0:45,0:45:99:0,126,1688	0/0:17,0:17:51.15:0,51,680	1/1:2,31:33:90.27:1049,90,0	1/1:2,29:31:81.24:945,81,0	1/1:4,28:32:75.22:873,75,0	0/0:32,0:32:93.28:0,93,1265	1/1:1,24:25:69.21:805,69,0	0/0:29,0:29:81.26:0,81,1117	1/1:0,28:28:75.22:875,75,0	1/1:3,17:20:48.10:536,48,0	1/1:1,23:24:69.21:805,69,0	1/1:0,36:36:99:1152,99,0	0/0:15,0:15:45.15:0,45,630	0/0:20,0:20:60.20:0,60,835	0/0:35,0:35:99:0,102,1410	0/0:24,0:24:69.22:0,69,948	0/1:5,22:27:11.82:697,0,12	1/1:0,28:28:84.25:975,84,0	1/1:0,3:3:9.03:105,9,0
chr10	101594650	.	GT	G	1104.47	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.845;DP=614;FS=13.119;HRun=8;HaplotypeScore=91.5515;InbreedingCoeff=0.9549;MQ=74.64;MQ0=0;MQRankSum=-2.186;QD=19.04;ReadPosRankSum=0.451;VQSLOD=2.3968;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,21:28:60.08:577,60,0	1/1:4,11:15:35.09:324,35,0	0/0:24,1:20:7.39:0,7,306	0/0:21,0:17:10.41:0,10,323	0/0:29,0:29:69.20:0,69,822	0/0:21,0:21:57.17:0,57,689	0/0:13,0:13:36.11:0,36,435	0/0:30,0:30:78.22:0,78,922	0/0:28,0:28:78.21:0,78,920	0/0:29,0:29:78.24:0,78,942	0/0:23,0:23:60.18:0,60,723	0/0:17,0:17:45.13:0,45,532	0/0:23,0:23:63.17:0,63,740	0/0:21,0:21:55.04:0,55,639	0/0:30,0:30:84.25:0,84,1003	1/1:3,12:15:36.05:346,36,0	0/0:25,0:25:69.21:0,69,829	0/0:15,0:15:42.12:0,42,495	0/0:24,0:24:63.19:0,63,761	0/0:27,0:27:66.19:0,66,787	0/0:12,0:12:27.08:0,27,326	0/0:18,0:18:48.14:0,48,572	0/0:23,0:23:60.16:0,60,711	0/0:7,0:7:21.06:0,21,253	0/0:32,0:32:93.28:0,93,1112	0/0:28,0:28:75.23:0,75,906	0/0:25,0:25:66.20:0,66,797	0/0:9,0:9:27.08:0,27,326
chr10	101594661	.	G	GT	5304.03	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=6.290;DP=604;FS=1.436;HRun=10;HaplotypeScore=85.0450;InbreedingCoeff=0.9840;MQ=75.63;MQ0=0;MQRankSum=-0.802;QD=17.92;ReadPosRankSum=1.726;VQSLOD=5.5364;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:24:51.43:268,51,0	1/1:3,0:12:28.87:183,29,0	0/0:30,0:24:28.67:0,29,204	0/0:19,0:15:5.81:0,6,70	1/1:3,30:33:84.68:896,85,0	0/0:20,0:20:47.94:0,48,394	0/0:13,0:13:32.94:0,33,271	1/1:25,0:25:52.32:300,52,0	0/0:25,0:26:64.89:0,65,516	0/0:27,0:27:77.88:0,78,636	0/0:23,0:24:64.95:0,65,523	1/1:2,16:18:48.12:512,48,0	1/1:4,21:25:35.55:583,36,0	1/1:3,19:22:60.01:619,60,0	0/0:30,0:30:80.87:0,81,662	1/1:2,0:13:31.40:168,31,0	0/0:24,0:24:56.90:0,57,464	0/0:12,0:16:42.04:0,42,313	1/1:25,0:25:51.66:267,52,0	1/1:23,0:23:64.39:379,64,0	1/1:10,0:10:20.51:120,21,0	0/0:19,0:19:41.94:0,42,345	0/0:19,0:20:52.97:0,53,425	0/0:10,0:10:29.71:0,30,225	0/0:30,0:30:74.84:0,75,609	1/1:29,0:29:53.44:382,53,0	1/1:28,0:28:76.31:461,76,0	1/1:9,0:9:26.52:167,27,0
chr10	101594666	.	T	TA	5724.90	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=-6.375;DP=614;FS=3.087;HRun=0;HaplotypeScore=82.8206;InbreedingCoeff=0.7059;MQ=79.31;MQ0=0;MQRankSum=0.310;QD=22.54;ReadPosRankSum=3.643;VQSLOD=6.3154;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:57.18:0,57,352	0/0:13,0:13:17.23:0,17,171	0/0:36,0:30:61.19:0,61,619	0/0:19,0:15:31.17:0,31,266	0/1:35,0:35:72.70:73,0,82	0/0:18,0:18:54.15:0,54,719	0/0:13,0:13:36.08:0,36,481	1/1:2,26:28:69.09:864,69,0	0/0:25,0:25:75.14:0,75,970	0/0:29,0:29:84.27:0,84,1146	0/0:25,0:25:75.18:0,75,981	0/1:20,0:20:32.37:32,0,44	0/1:23,0:23:28.84:57,0,29	0/1:22,0:22:1.84:39,0,2	0/0:31,0:31:93.24:0,93,1231	0/0:12,0:12:29:0,29,196	0/0:22,0:22:66.14:0,66,861	0/0:18,0:18:50.94:0,51,607	1/1:0,21:21:63.17:831,63,0	1/1:0,23:23:66.21:912,66,0	1/1:0,8:8:21.07:293,21,0	0/0:18,0:18:54.14:0,54,691	0/0:20,0:20:60.13:0,60,782	0/0:10,0:10:30.10:0,30,412	0/0:28,0:28:84.25:0,84,1123	1/1:2,31:33:54.48:1174,54,0	1/1:1,29:30:78.25:1074,78,0	1/1:0,11:11:27.09:376,27,0
chr10	101594777	.	ACG	A	49.11	PASS	AB=0.895;AC=4;AF=0.071;AN=56;BaseQRankSum=5.055;DP=690;FS=6.322;HRun=0;HaplotypeScore=121.7542;InbreedingCoeff=-0.0753;MQ=55.34;MQ0=23;MQRankSum=-4.641;QD=1.12;ReadPosRankSum=-1.097;VQSLOD=1.6339;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,3:19:6.01:0,6,82	0/1:6,4:10:83.32:83,0,140	0/0:36,1:11:19.95:0,20,271	0/0:44,1:13:10.30:0,10,315	0/0:33,0:33:55.55:0,56,884	0/0:23,0:23:65.91:0,66,1155	0/0:29,0:29:75.06:0,75,1142	0/0:30,0:29:73.49:0,73,923	0/0:26,0:26:75.01:0,75,1198	0/0:28,0:26:63.06:0,63,1033	0/0:25,0:23:65.85:0,66,1107	0/0:26,0:26:35.23:0,35,737	0/0:19,0:19:35.97:0,36,529	0/0:19,0:19:44.89:0,45,650	0/0:35,0:35:93:0,93,1501	0/1:11,1:12:18.36:18,0,101	0/0:28,0:28:67.27:0,67,1317	0/1:15,1:16:45.89:46,0,262	0/0:17,0:17:41.75:0,42,520	0/0:18,0:18:28.30:0,28,676	0/0:51,0:46:99:0,102,1665	0/0:18,0:18:54.11:0,54,932	0/0:24,2:26:66.14:0,66,1114	0/0:31,0:31:90.20:0,90,1548	0/0:20,0:20:54.08:0,54,884	0/0:19,0:19:56.29:0,56,903	0/0:23,0:23:50.99:0,51,756	0/1:6,0:6:2.48:2,0,263
chr10	101594790	.	G	GAC	5400.40	PASS	AB=0.787;AC=24;AF=0.429;AN=56;BaseQRankSum=-4.819;DP=731;FS=12.226;HRun=0;HaplotypeScore=109.9992;InbreedingCoeff=0.7239;MQ=54.98;MQ0=28;MQRankSum=0.479;QD=16.77;ReadPosRankSum=1.545;VQSLOD=4.1205;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:20:0.10:0,0,0	1/1:7,0:11:6.70:34,7,0	0/0:47,1:11:20.45:0,20,238	0/0:52,0:13:26.71:0,27,288	1/1:2,0:33:36.01:318,36,0	0/0:22,0:23:50.96:0,51,588	0/0:25,0:25:66.16:0,66,783	1/1:10,24:33:63.15:931,63,0	0/0:27,0:28:69.02:0,69,812	0/0:24,0:24:60.01:0,60,703	0/0:28,0:25:71.95:0,72,809	1/1:6,1:23:27.02:258,27,0	1/1:5,0:22:23.98:221,24,0	1/1:6,1:19:12.01:106,12,0	0/0:37,0:37:93.28:0,93,1148	0/0:6,0:14:5.30:0,5,26	0/0:25,0:25:57.11:0,57,667	1/1:4,0:15:12.94:106,13,0	1/1:4,11:15:30.10:490,30,0	1/1:10,7:17:36.10:557,36,0	0/1:18,37:52:61.88:905,0,62	0/0:20,0:20:60.13:0,60,708	0/0:29,0:29:69.17:0,69,810	0/0:36,0:36:99:0,99,1211	0/0:19,0:19:54.16:0,54,662	0/1:4,19:23:10.66:811,0,11	1/1:3,23:26:32.71:544,33,0	0/1:7,0:7:23.83:117,0,24
chr10	101594804	.	GAGACAAAC	G	462.17	PASS	AB=0.871;AC=6;AF=0.107;AN=56;BaseQRankSum=6.336;DP=719;FS=21.622;HRun=0;HaplotypeScore=185.8482;InbreedingCoeff=0.6521;MQ=57.93;MQ0=27;MQRankSum=-4.549;QD=10.27;ReadPosRankSum=1.972;VQSLOD=1.2624;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,3:12:0:0,0,0	1/1:1,8:9:15.05:371,15,0	0/0:48,0:14:8.91:0,9,1039	0/0:51,0:17:47.81:0,48,1169	0/0:42,0:42:99:0,101,2939	0/0:17,0:17:51.16:0,51,1745	0/0:23,0:23:65.29:0,65,2160	0/0:38,0:37:99:0,102,3206	0/0:25,0:25:75.22:0,75,2984	0/0:25,0:24:72.24:0,72,2564	0/0:29,0:26:75.24:0,75,2900	0/0:23,0:23:41.17:0,41,1481	0/0:18,0:18:29:0,29,1084	0/0:15,0:15:21.07:0,21,847	0/0:35,0:35:99:0,102,4012	1/1:7,1:8:9.03:196,9,0	0/0:24,0:24:61.45:0,61,2429	0/1:15,0:16:13.34:13,0,751	0/0:17,0:17:48.16:0,48,1826	0/0:18,0:18:54.16:0,54,2127	0/0:52,0:50:96.33:0,96,3888	0/0:21,0:21:63.18:0,63,2449	0/0:29,0:29:75.26:0,75,2996	0/0:36,0:36:99:0,108,4418	0/0:23,0:23:69.24:0,69,2795	0/0:29,0:29:87.27:0,87,3094	0/0:28,0:28:48.01:0,48,1966	0/0:7,0:8:1.84:0,2,335
chr10	101595051	.	GC	G	1619.27	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.575;DP=552;FS=5.867;HRun=1;HaplotypeScore=63.8513;InbreedingCoeff=0.9975;MQ=74.73;MQ0=0;MQRankSum=-3.706;QD=35.20;ReadPosRankSum=1.628;VQSLOD=3.8238;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:72.24:1006,72,0	1/1:0,8:8:21.05:294,21,0	0/0:10,0:10:27.06:0,27,406	0/0:10,0:10:30.10:0,30,463	0/0:31,0:31:93.30:0,93,1463	0/0:17,0:17:51.17:0,51,815	0/0:25,0:25:75.23:0,75,1148	0/0:34,0:34:99:0,99,1491	0/0:17,0:17:51.17:0,51,810	0/0:26,0:26:78.25:0,78,1208	0/0:24,0:24:72.25:0,72,1149	0/0:25,0:25:72.23:0,72,1126	0/0:24,0:24:72.25:0,72,1145	0/0:14,0:14:42.14:0,42,671	0/0:19,0:19:57.18:0,57,873	1/1:0,13:13:33.11:462,33,0	0/0:13,0:13:39.13:0,39,623	0/0:9,0:9:27.07:0,27,406	0/0:14,0:14:39.12:0,39,601	0/0:28,0:28:84.29:0,84,1342	0/0:16,0:16:45.15:0,45,719	0/0:20,0:20:60.20:0,60,958	0/0:23,0:23:69.24:0,69,1103	0/0:16,0:16:48.10:0,48,713	0/0:20,0:20:60.19:0,60,936	0/0:27,0:27:81.27:0,81,1269	0/0:26,0:26:78.23:0,78,1194	0/0:18,0:18:51.17:0,51,815
chr10	101596280	.	CT	C	1576.72	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.646;DP=636;FS=0.896;HRun=11;HaplotypeScore=63.5455;InbreedingCoeff=0.9789;MQ=74.00;MQ0=0;MQRankSum=-1.783;QD=16.77;ReadPosRankSum=2.470;VQSLOD=4.5367;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,1:35:59.56:0,60,832	0/0:10,0:10:30.08:0,30,320	0/0:12,0:13:17.46:0,17,149	0/0:14,0:14:21.04:0,21,212	1/1:2,32:34:89.73:724,90,0	0/0:28,0:28:72.16:0,72,754	0/0:13,0:13:33.05:0,33,334	0/0:24,1:27:35.17:0,35,548	0/0:22,1:23:44.49:0,44,657	0/0:29,0:29:43.26:0,43,638	0/0:25,0:25:60.15:0,60,640	1/1:6,14:20:16.88:317,17,0	1/1:2,11:13:11.04:224,11,0	1/1:4,23:27:56.93:468,57,0	0/0:19,0:19:51.11:0,51,536	0/0:19,0:19:45.07:0,45,468	0/0:29,2:31:28.87:0,29,698	0/0:12,0:12:33.08:0,33,351	0/0:26,2:29:31.62:0,32,709	0/0:45,2:48:94.74:0,95,1254	0/0:14,0:14:30.08:0,30,320	0/0:30,2:33:41.92:0,42,791	0/0:23,0:23:60.14:0,60,632	0/0:15,1:16:17.45:0,17,383	0/0:21,1:22:29.49:0,29,514	0/0:22,0:22:59.98:0,60,622	0/0:24,0:23:63.16:0,63,672	0/0:13,0:13:30.05:0,30,304
chr10	101597293	.	TCCAAGGGTGGCTTC	T	9232.72	PASS	AB=0.575;AC=13;AF=0.232;AN=56;BaseQRankSum=13.732;DP=690;FS=0.000;HRun=0;HaplotypeScore=271.2615;InbreedingCoeff=0.8572;MQ=81.79;MQ0=0;MQRankSum=-9.677;QD=71.57;ReadPosRankSum=-0.876;VQSLOD=3.4480;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,7598	0/0:10,0:10:27.09:0,27,1897	0/0:25,0:25:67.47:0,67,3545	0/0:27,0:27:81.28:0,81,4273	0/0:29,0:29:84.29:0,84,5400	0/0:20,0:20:54.19:0,54,3443	0/0:33,0:33:90.31:0,90,5676	1/1:6,21:27:63.20:2231,63,0	0/0:34,0:34:99:0,102,7123	0/0:18,0:18:54.18:0,54,3288	0/0:19,0:19:57.17:0,57,3159	0/0:24,0:24:72.25:0,72,4776	0/0:19,0:19:57.20:0,57,4003	0/0:38,0:38:99:0,111,7476	0/0:38,0:38:99:0,111,7334	0/0:33,0:33:96.33:0,96,6556	0/0:41,0:41:99:0,114,7385	0/0:26,0:26:75.26:0,75,4802	1/1:3,14:17:42.11:1514,42,0	1/1:4,14:18:30.10:1252,30,0	1/1:7,7:14:12.04:498,12,0	0/0:13,0:13:36.12:0,36,2342	0/0:20,0:20:60.21:0,60,4009	0/0:32,0:32:96.29:0,96,5953	0/0:20,0:20:57.20:0,57,3897	0/1:6,17:23:99:1709,0,157	1/1:2,23:25:45.24:1902,45,0	1/1:0,5:5:3.01:127,3,0
chr10	101597431	.	CA	C	3410.51	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.626;DP=800;FS=6.752;HRun=6;HaplotypeScore=77.0838;InbreedingCoeff=0.9992;MQ=79.06;MQ0=0;MQRankSum=-1.024;QD=27.95;ReadPosRankSum=3.695;VQSLOD=4.3135;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,175,2252	0/0:8,0:8:24.08:0,24,315	0/0:25,0:25:60.15:0,60,737	0/0:22,0:22:48.74:0,49,576	1/1:1,28:29:75.14:793,75,0	0/0:28,0:28:84.25:0,84,1078	0/0:21,0:21:60.17:0,60,772	0/0:38,0:38:99:0,108,1385	0/0:45,0:45:99:0,135,1764	0/0:31,0:32:87.13:0,87,1083	0/0:24,0:24:63.20:0,63,829	1/1:2,24:27:71.21:748,71,0	1/1:0,31:31:81.20:870,81,0	1/1:0,35:35:93.23:999,93,0	0/0:45,0:45:99:0,120,1551	0/0:39,0:39:99:0,114,1475	0/0:28,0:28:75.24:0,75,984	0/0:23,0:23:66.20:0,66,854	0/0:21,0:21:54.16:0,54,685	0/0:29,0:29:75.24:0,75,986	0/0:17,0:17:51.17:0,51,671	0/0:12,0:12:36.11:0,36,461	0/0:25,0:25:72.22:0,72,932	0/0:42,0:42:99:0,117,1490	0/0:18,0:18:54.18:0,54,710	0/0:25,0:25:72.20:0,72,925	0/0:42,0:41:99:0,117,1502	0/0:10,0:10:30.10:0,30,395
chr10	101599265	.	AT	A	1493.57	PASS	AB=0.565;AC=13;AF=0.232;AN=56;BaseQRankSum=12.247;DP=521;FS=2.438;HRun=11;HaplotypeScore=60.3800;InbreedingCoeff=0.8947;MQ=76.57;MQ0=0;MQRankSum=-1.199;QD=12.34;ReadPosRankSum=2.532;VQSLOD=3.5629;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:20:28.51:82,29,0	1/1:1,0:11:20.37:59,20,0	0/0:11,0:10:21.02:0,21,198	0/0:14,0:14:20.20:0,20,200	1/1:3,25:28:71.83:581,72,0	0/0:25,0:25:66.17:0,66,703	0/0:17,1:18:20.46:0,20,419	0/0:29,0:29:66.15:0,66,696	0/0:26,0:26:60.13:0,60,625	0/0:21,0:21:57.08:0,57,593	0/0:22,0:22:63.16:0,63,671	1/1:1,14:15:12.96:313,13,0	1/1:3,10:13:29.95:246,30,0	1/1:3,18:21:26.74:370,27,0	0/0:17,0:17:42.09:0,42,440	0/1:3,0:13:10.65:32,0,11	0/0:33,1:34:65.23:0,65,833	0/0:15,0:15:42.11:0,42,448	0/0:21,0:21:48.10:0,48,499	0/0:24,0:24:62.90:0,63,651	0/0:11,0:11:30.07:0,30,319	0/0:10,0:10:30.08:0,30,320	0/0:14,1:15:14.44:0,14,342	0/0:8,0:8:21.05:0,21,224	0/0:26,0:26:72.18:0,72,768	0/0:22,0:21:48.11:0,48,500	0/0:22,0:22:57.09:0,57,586	0/0:9,0:9:24.06:0,24,256
chr10	101599812	.	G	GCATACATA	273.98	PASS	AB=1.000;AC=7;AF=0.135;AN=52;BaseQRankSum=2.030;DP=564;FS=6.082;HRun=0;HaplotypeScore=193.5388;InbreedingCoeff=0.5420;MQ=59.02;MQ0=7;MQRankSum=1.484;QD=2.82;ReadPosRankSum=3.199;VQSLOD=1.6961;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:5.52:0,6,63	0/0:12,0:12:9.03:0,9,167	./.	./.	0/0:18,0:18:24.07:0,24,498	0/0:28,0:28:41.21:0,41,1014	0/0:21,0:21:27.51:0,28,426	1/1:29,0:29:2.73:14,3,0	0/0:28,0:28:33.10:0,33,634	0/0:30,0:30:57.16:0,57,1067	0/0:16,0:16:18.05:0,18,352	0/0:25,0:25:14.78:0,15,278	0/0:31,0:31:35.89:0,36,609	1/1:26,0:28:24.13:179,24,0	0/0:25,0:25:21.16:0,21,563	0/0:26,0:26:18.06:0,18,354	1/1:3,9:16:6:147,6,0	0/0:10,0:9:12.01:0,12,220	0/0:9,0:10:4.19:0,4,14	0/1:22,0:22:51.85:60,0,52	0/0:14,0:14:0.89:0,1,2	0/0:12,0:12:12.04:0,12,298	0/0:20,0:20:24.06:0,24,476	0/0:20,0:20:29.90:0,30,406	0/0:18,0:18:36.09:0,36,696	0/0:24,0:28:24.31:0,24,373	0/0:29,0:29:1.66:0,2,240	0/0:9,0:9:5.05:0,5,42
chr10	101599853	.	CAAACAT	C	1879.63	PASS	AB=0.917;AC=14;AF=0.250;AN=56;BaseQRankSum=10.969;DP=543;FS=14.090;HRun=0;HaplotypeScore=220.6085;InbreedingCoeff=0.6209;MQ=51.44;MQ0=2;MQRankSum=-12.324;QD=11.67;ReadPosRankSum=-1.640;VQSLOD=1.5020;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,3:17:19.21:185,19,0	1/1:4,5:9:21.82:287,22,0	0/0:8,0:6:18.06:0,18,369	0/0:13,0:11:29.12:0,29,649	0/0:30,0:30:74.27:0,74,1113	0/0:28,0:28:81.26:0,81,2449	0/0:21,0:21:53.79:0,54,1547	0/0:22,0:21:38.12:0,38,743	0/0:17,0:17:47.53:0,48,1432	0/0:30,0:30:80.98:0,81,2358	0/0:11,0:11:33.11:0,33,923	0/0:24,0:24:65.47:0,65,873	0/0:31,0:31:89.73:0,90,1580	0/0:24,0:24:64.63:0,65,758	0/0:24,0:24:65.97:0,66,1669	0/1:10,10:20:64.29:475,0,64	0/0:21,0:21:33.11:0,33,921	0/0:11,0:11:23.90:0,24,476	0/1:12,0:11:10.70:11,0,156	1/1:26,1:27:26.20:386,26,0	0/1:7,0:7:51.96:52,0,54	0/0:12,0:12:33.11:0,33,995	0/0:14,0:14:38.96:0,39,1113	0/0:22,0:22:62.95:0,63,1312	0/0:19,0:19:54.17:0,54,1647	0/1:29,0:29:93.44:93,0,146	1/1:27,0:27:44.25:336,44,0	1/1:13,0:13:29.77:240,30,0
chr10	101599857	.	CAT	C	907.17	PASS	AB=0.877;AC=9;AF=0.161;AN=56;BaseQRankSum=10.735;DP=537;FS=33.805;HRun=0;HaplotypeScore=196.8851;InbreedingCoeff=0.0491;MQ=50.99;MQ0=2;MQRankSum=-11.204;QD=6.09;ReadPosRankSum=-2.352;VQSLOD=1.6333;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:4.33:20,0,4	1/1:9,0:9:1.04:44,1,0	0/0:9,0:7:21.07:0,21,369	0/0:14,0:12:30.03:0,30,562	0/0:32,0:32:74.77:0,75,994	0/0:28,0:28:81.28:0,81,1516	0/0:22,0:22:56.89:0,57,1056	0/0:23,0:22:32.09:0,32,835	0/0:16,0:16:45.15:0,45,864	0/0:27,0:27:75.25:0,75,1401	0/0:11,0:11:30.10:0,30,577	0/0:24,0:24:69.04:0,69,953	0/0:32,0:32:96.20:0,96,1375	0/0:22,0:22:63.10:0,63,789	0/0:20,0:20:57.14:0,57,1023	0/1:18,0:18:42.42:73,0,42	0/0:21,0:21:33.11:0,33,630	0/0:10,0:10:18.06:0,18,341	0/0:12,0:11:27.24:0,27,293	0/1:23,6:28:14.78:190,0,15	0/1:9,0:9:17.59:18,0,49	0/0:14,0:14:36.12:0,36,686	0/0:15,0:15:42.13:0,42,769	0/0:17,0:17:45.15:0,45,850	0/0:19,0:19:54.19:0,54,1043	0/1:20,9:29:99:290,0,236	0/1:21,8:29:56.22:299,0,56	0/1:9,4:13:15.01:110,0,15
chr10	101599871	.	G	GAGAGA	13868.82	PASS	AB=0.731;AC=23;AF=0.411;AN=56;BaseQRankSum=13.138;DP=565;FS=23.366;HRun=0;HaplotypeScore=198.8844;InbreedingCoeff=0.4857;MQ=57.79;MQ0=1;MQRankSum=-16.171;QD=43.07;ReadPosRankSum=3.326;VQSLOD=3.1160;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,5:13:14.99:413,0,15	1/1:5,4:9:27.08:577,27,0	0/0:20,0:17:48.14:0,48,843	0/0:19,0:16:39:0,39,767	1/1:17,0:35:19.53:1155,20,0	0/0:29,0:29:69.21:0,69,1394	0/0:20,0:20:54.61:0,55,1077	0/1:20,4:27:39.68:820,0,40	0/0:15,0:15:39.09:0,39,783	0/0:20,0:20:50.89:0,51,981	0/0:14,0:14:36.10:0,36,634	1/1:9,0:26:33.16:1237,33,0	1/1:7,0:28:72.29:1595,72,0	1/1:8,0:21:43.42:1005,43,0	0/0:17,0:17:48.14:0,48,1025	0/1:16,6:23:41.02:1011,0,41	0/0:18,0:18:39.36:0,39,685	0/1:9,0:11:74.09:159,0,74	1/1:7,4:12:18.60:608,19,0	0/1:19,13:34:39.18:1157,0,39	0/1:5,4:10:20.87:164,0,21	0/0:16,0:16:36.12:0,36,782	0/0:13,0:13:30.08:0,30,546	0/0:19,0:19:41.92:0,42,900	0/0:23,0:23:65.86:0,66,1249	0/1:14,12:27:17.81:1511,0,18	1/1:16,17:33:56.56:1548,57,0	1/1:4,8:12:36.12:908,36,0
chr10	101599877	.	G	GA	6227.08	PASS	AB=0.754;AC=26;AF=0.464;AN=56;BaseQRankSum=16.233;DP=562;FS=12.262;HRun=0;HaplotypeScore=179.4796;InbreedingCoeff=0.7007;MQ=61.69;MQ0=1;MQRankSum=-14.676;QD=19.16;ReadPosRankSum=2.855;VQSLOD=4.9596;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:15:32.86:319,33,0	1/1:0,5:9:27.03:286,27,0	0/0:23,0:21:56.93:0,57,695	0/0:16,0:14:30.94:0,31,415	1/1:2,13:33:32.01:717,32,0	0/0:27,0:27:78.12:0,78,938	0/0:19,0:19:15.70:0,16,610	0/1:17,7:24:29.11:275,0,29	0/0:15,0:15:41.99:0,42,489	0/0:16,0:16:37.16:0,37,446	0/0:14,0:14:39.07:0,39,461	1/1:1,7:25:66.12:807,66,0	1/1:1,7:28:63.38:858,63,0	1/1:3,7:22:36.90:554,37,0	0/0:16,0:16:48.13:0,48,623	1/1:0,14:21:57.02:637,57,0	0/0:17,0:17:41.94:0,42,463	0/1:8,0:11:39.96:54,0,40	0/1:8,4:12:17.81:109,0,18	1/1:21,16:36:31.75:401,32,0	0/1:7,5:12:16.31:56,0,16	0/0:15,0:15:39.97:0,40,478	0/0:15,0:15:39.01:0,39,440	0/0:21,0:21:54.01:0,54,612	0/0:22,0:22:66.11:0,66,821	1/1:16,13:29:6.80:408,7,0	1/1:17,17:34:29.36:471,29,0	1/1:5,8:13:32.50:275,33,0
chr10	101601467	.	T	TG	14408.10	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-16.384;DP=748;FS=8.499;HRun=3;HaplotypeScore=69.3197;InbreedingCoeff=0.9986;MQ=62.47;MQ0=2;MQRankSum=2.859;QD=36.48;ReadPosRankSum=1.125;VQSLOD=5.2364;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,42:43:99:1638,117,0	1/1:1,10:11:27.09:378,27,0	0/0:30,0:28:75.15:0,75,853	0/0:21,1:22:27.71:0,28,577	1/1:2,28:30:63.21:881,63,0	0/0:26,0:26:75.23:0,75,900	0/0:29,0:29:84.20:0,84,980	1/1:5,21:26:66.21:907,66,0	0/0:20,0:20:54.14:0,54,627	0/0:28,0:28:72.22:0,72,863	0/0:26,0:26:72.20:0,72,844	1/1:3,22:25:69.23:961,69,0	1/1:1,23:24:69.23:965,69,0	1/1:1,31:32:87.29:1217,87,0	0/0:34,0:34:93.26:0,93,1093	1/1:0,7:7:18.06:252,18,0	0/0:34,1:35:65.16:0,65,1158	1/1:2,32:34:93.31:1302,93,0	1/1:2,15:15:45.12:608,45,0	1/1:1,25:26:69.23:962,69,0	1/1:1,41:42:99:1470,105,0	0/0:24,0:24:66.20:0,66,791	0/0:21,0:21:60.17:0,60,707	0/0:37,0:37:99:0,108,1296	0/0:21,0:21:55.02:0,55,635	1/1:5,25:30:45.23:1019,45,0	1/1:1,30:31:84.28:1176,84,0	1/1:0,17:17:48.16:672,48,0
chr10	101602550	.	A	AC	2771.55	PASS	AB=0.765;AC=29;AF=0.518;AN=56;BaseQRankSum=9.326;DP=456;FS=13.917;HRun=9;HaplotypeScore=66.9679;InbreedingCoeff=0.7159;MQ=80.44;MQ0=1;MQRankSum=-1.056;QD=12.05;ReadPosRankSum=0.677;VQSLOD=1.4585;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,12:26:48.11:189,0,48	1/1:3,3:6:5.75:66,6,0	0/0:16,0:16:29.85:0,30,230	0/1:16,1:16:16.06:16,0,137	1/1:3,6:11:17.60:134,18,0	0/0:23,0:24:49.05:0,49,400	0/0:23,0:23:50.95:0,51,437	0/1:9,9:18:5.01:169,0,5	0/0:19,0:19:41.96:0,42,365	0/0:18,0:18:38.96:0,39,333	0/0:26,0:26:65.96:0,66,572	1/1:4,0:11:2.77:14,3,0	1/1:6,1:12:8.55:46,9,0	1/1:2,0:11:10.97:56,11,0	0/0:15,0:15:38.95:0,39,331	1/1:2,13:15:23.81:265,24,0	0/0:26,0:26:74.94:0,75,643	1/1:1,2:7:8.69:62,9,0	1/1:10,3:13:3.58:202,4,0	1/1:3,15:18:36.10:398,36,0	1/1:5,12:17:27.05:289,27,0	0/0:19,0:20:53.02:0,53,448	0/0:11,0:11:32.98:0,33,283	0/0:17,0:17:35.97:0,36,311	0/0:10,0:10:26.99:0,27,234	1/1:4,15:19:25.06:491,25,0	1/1:4,19:24:19:419,19,0	1/1:0,5:5:15.04:166,15,0
chr10	101602961	.	G	GA	2285.46	PASS	AB=0.844;AC=15;AF=0.268;AN=56;BaseQRankSum=1.712;DP=568;FS=8.299;HRun=10;HaplotypeScore=73.4247;InbreedingCoeff=0.7259;MQ=65.71;MQ0=10;MQRankSum=3.216;QD=11.20;ReadPosRankSum=0.091;VQSLOD=2.5763;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,18:27:71.53:734,72,0	1/1:3,8:11:33.05:341,33,0	0/1:42,0:12:10.49:10,0,20	0/1:40,1:15:28.02:28,0,38	1/1:11,20:30:50.32:487,50,0	0/0:22,0:22:53.85:0,54,434	0/0:13,0:13:32.94:0,33,267	0/0:37,1:38:56.93:0,57,663	0/0:15,0:15:40.99:0,41,326	0/0:26,0:27:67.89:0,68,540	0/0:28,0:28:71.88:0,72,587	0/1:3,8:11:9.52:113,0,10	1/1:2,13:15:30.07:320,30,0	1/1:2,10:12:27.07:285,27,0	0/0:19,0:20:55.45:0,55,430	1/1:4,7:11:15.04:160,15,0	0/0:26,0:26:62.92:0,63,516	0/0:3,0:18:26.26:0,26,75	0/0:10,0:10:10.65:0,11,154	0/0:19,0:17:32.15:0,32,252	0/0:6,0:6:11.95:0,12,95	0/0:11,0:11:29.52:0,30,224	0/0:21,0:21:17.46:0,17,349	0/0:8,0:8:14.96:0,15,123	0/0:20,0:20:46.22:0,46,371	0/0:26,0:26:62.88:0,63,515	0/0:19,0:19:41.91:0,42,344	0/0:16,0:16:44.63:0,45,356
chr10	101603013	.	C	CTCTA	4563.42	PASS	AB=1.000;AC=27;AF=0.500;AN=54;BaseQRankSum=2.352;DP=573;FS=1.072;HRun=0;HaplotypeScore=122.9414;InbreedingCoeff=0.8005;MQ=60.20;MQ0=3;MQRankSum=-1.563;QD=16.07;ReadPosRankSum=-1.450;VQSLOD=4.4083;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:21:14.47:0,14,144	0/1:11,0:11:13.84:14,0,57	./.	0/1:10,0:8:0:0,0,0	1/1:22,13:35:42.14:976,42,0	0/0:23,0:23:30.10:0,30,450	0/0:16,0:15:15.02:0,15,187	1/1:43,0:42:15.18:153,15,0	0/0:13,0:13:21.07:0,21,319	0/0:30,0:30:39.07:0,39,580	0/0:34,0:34:54.18:0,54,827	1/1:11,4:16:36.07:630,36,0	0/0:18,0:18:33.11:0,33,506	1/1:7,3:10:21.07:482,21,0	1/1:8,10:18:18.06:420,18,0	0/1:11,0:11:1.02:1,0,150	0/0:28,0:28:36.55:0,37,679	1/1:12,0:14:13.78:161,14,0	1/1:9,0:10:6.45:65,6,0	1/1:27,0:26:34.54:388,35,0	1/1:7,0:8:0.98:20,1,0	0/0:22,0:22:39.13:0,39,596	0/0:25,0:25:39.13:0,39,598	0/0:10,0:12:21.07:0,21,306	0/0:31,0:31:72.23:0,72,1082	1/1:20,0:20:33.08:633,33,0	1/1:23,0:29:24.54:251,25,0	1/1:20,0:18:16.99:369,17,0
chr10	101603058	.	TCTA	T	1622.97	PASS	AB=0.993;AC=19;AF=0.339;AN=56;BaseQRankSum=7.738;DP=596;FS=4.306;HRun=0;HaplotypeScore=136.0467;InbreedingCoeff=0.2494;MQ=59.48;MQ0=3;MQRankSum=2.033;QD=5.88;ReadPosRankSum=-4.762;VQSLOD=0.6774;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:24:20.74:311,21,0	1/1:2,9:11:12.04:175,12,0	0/1:5,0:5:21.01:21,0,153	0/0:9,0:7:20.57:0,21,205	0/0:28,1:29:9.54:0,10,957	0/0:20,0:20:60.20:0,60,1043	0/0:17,0:17:39.13:0,39,675	1/1:35,0:35:36.47:132,36,0	0/0:12,0:12:36.12:0,36,756	0/0:24,0:24:60.20:0,60,1197	0/0:31,0:31:87.29:0,87,1623	0/1:19,0:19:80.27:80,0,735	0/0:25,0:25:66.22:0,66,1230	0/1:14,1:15:46.75:47,0,526	0/0:21,0:21:51.17:0,51,768	1/1:0,14:14:24.08:400,24,0	0/0:29,0:29:79.07:0,79,1515	0/1:17,0:16:56.67:57,0,407	0/1:15,0:12:21.24:87,0,21	0/1:36,0:35:44.56:188,0,45	1/1:21,0:21:2.83:88,3,0	0/0:21,0:21:60.68:0,61,1189	0/0:26,0:26:78.26:0,78,1446	0/0:21,0:21:54.18:0,54,982	0/0:35,0:35:99:0,99,2005	0/1:23,0:23:25.96:152,0,26	0/1:28,0:27:6.14:6,0,181	0/1:13,0:13:20.73:63,0,21
chr10	101603059	.	CTACT	C	3551.37	PASS	AB=0.903;AC=12;AF=0.214;AN=56;BaseQRankSum=9.041;DP=593;FS=8.166;HRun=0;HaplotypeScore=140.4583;InbreedingCoeff=0.1415;MQ=59.61;MQ0=2;MQRankSum=0.221;QD=16.60;ReadPosRankSum=0.231;VQSLOD=2.9504;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:8.96:13,0,9	0/1:11,0:11:16.90:17,0,58	0/0:5,0:5:14.41:0,14,239	0/0:9,0:7:8.66:0,9,219	0/0:29,0:29:79.81:0,80,1473	0/0:20,0:20:60.20:0,60,1266	0/0:17,0:17:39.13:0,39,841	0/1:7,26:33:91.66:1070,0,92	0/0:13,0:13:39.13:0,39,988	0/0:23,0:23:69.24:0,69,1660	0/0:31,0:31:90.29:0,90,2021	0/0:20,0:20:53.83:0,54,1076	0/0:25,0:25:69.24:0,69,1550	0/0:15,0:15:40.85:0,41,748	0/0:21,0:21:51.17:0,51,999	1/1:14,0:14:7.09:16,7,0	0/0:29,0:29:84.28:0,84,1874	0/0:17,0:16:20.96:0,21,652	1/1:14,0:12:26.95:416,27,0	0/1:34,0:33:99:582,0,269	0/1:21,0:21:14.02:497,0,14	0/0:22,0:22:63.22:0,63,1520	0/0:27,0:27:81.28:0,81,1806	0/0:21,0:21:54.18:0,54,1167	0/0:35,0:35:99:0,105,2619	0/1:11,11:22:53.47:433,0,53	0/1:28,0:27:99:296,0,304	0/1:13,0:13:79.79:213,0,80
chr10	101603061	.	A	AT	2538.09	PASS	AB=0.948;AC=25;AF=0.446;AN=56;BaseQRankSum=14.378;DP=576;FS=4.550;HRun=1;HaplotypeScore=109.1972;InbreedingCoeff=0.6150;MQ=59.92;MQ0=1;MQRankSum=-2.661;QD=8.84;ReadPosRankSum=-0.877;VQSLOD=0.8643;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:23:11.15:30,11,0	1/1:9,0:9:6.59:56,7,0	0/1:6,0:6:21.01:21,0,153	0/0:9,0:7:20.61:0,21,219	0/1:26,0:26:35.26:35,0,411	0/0:20,0:20:60.20:0,60,835	0/0:17,0:17:39.13:0,39,545	1/1:26,0:26:30.54:116,31,0	0/0:13,0:13:39.13:0,39,544	0/0:21,0:21:60.20:0,60,834	0/0:30,0:30:87.29:0,87,1216	0/1:20,0:20:65.26:65,0,418	0/0:23,0:23:69.22:0,69,946	0/1:15,0:15:26.19:26,0,301	0/0:21,0:21:26.06:0,26,449	1/1:14,0:14:13.86:42,14,0	0/0:28,2:30:55.68:0,56,1098	0/1:11,6:16:99:195,0,302	1/1:12,1:12:16.71:114,17,0	1/1:18,16:33:67.49:649,67,0	1/1:17,4:21:32.19:176,32,0	0/0:22,0:22:63.68:0,64,873	0/0:28,0:28:84.27:0,84,1156	0/0:21,0:21:54.18:0,54,755	0/0:34,0:34:99:0,102,1425	1/1:12,10:22:51.21:481,51,0	1/1:15,13:27:38.70:433,39,0	1/1:5,8:13:32.14:312,32,0
chr10	101603063	.	T	TATC	1593.34	PASS	AB=0.839;AC=12;AF=0.214;AN=56;BaseQRankSum=12.243;DP=590;FS=8.360;HRun=0;HaplotypeScore=136.8666;InbreedingCoeff=0.7318;MQ=59.78;MQ0=1;MQRankSum=0.347;QD=9.96;ReadPosRankSum=0.164;VQSLOD=2.8270;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:21.85:0,22,189	0/0:9,0:9:9.85:0,10,72	0/0:7,0:7:15.52:0,16,247	0/0:10,0:8:12:0,12,231	0/0:27,0:27:72.53:0,73,887	0/0:20,0:20:54.18:0,54,896	0/0:17,0:17:39.13:0,39,650	1/1:28,0:28:9.43:118,9,0	0/0:13,0:13:39.13:0,39,647	0/0:22,0:22:63.22:0,63,1035	0/0:30,0:30:75.24:0,75,1216	0/0:20,0:20:52.92:0,53,741	0/0:25,0:25:72.22:0,72,1137	0/0:16,0:16:41.80:0,42,544	0/0:21,0:21:51.13:0,51,711	0/0:14,0:14:23.93:0,24,189	0/0:31,0:31:83.31:0,83,1342	0/0:18,0:17:45.64:0,46,597	1/1:13,0:12:15.89:97,16,0	0/1:29,0:34:52.47:365,0,52	1/1:22,0:22:6.51:88,7,0	0/0:22,0:22:60.18:0,60,961	0/0:28,0:28:81.28:0,81,1329	0/0:21,0:21:54.18:0,54,891	0/0:34,0:34:99:0,99,1619	1/1:13,8:21:35.57:571,36,0	0/1:22,0:27:70.96:195,0,71	1/1:8,5:13:20.98:332,21,0
chr10	101604303	.	GTTTT	G	8785.19	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=16.326;DP=636;FS=1.471;HRun=13;HaplotypeScore=138.8427;InbreedingCoeff=0.9780;MQ=57.35;MQ0=6;MQRankSum=-12.414;QD=27.37;ReadPosRankSum=2.825;VQSLOD=3.1670;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,19:26:32.98:434,33,0	1/1:2,7:9:21.05:307,21,0	0/0:28,0:15:19.46:0,19,352	0/0:20,0:12:18.05:0,18,317	1/1:2,32:30:77.91:983,78,0	0/0:16,0:18:54.17:0,54,1108	0/0:23,0:23:66.09:0,66,1364	1/1:5,20:17:35.97:419,36,0	0/0:15,0:16:45.15:0,45,1024	0/0:30,0:31:81.16:0,81,1474	0/0:26,0:27:75.24:0,75,1486	1/1:1,16:17:39.10:569,39,0	1/1:2,12:14:27.06:394,27,0	1/1:2,19:21:51.07:698,51,0	0/0:22,0:25:72.24:0,72,1490	1/1:2,9:11:21.06:296,21,0	0/0:24,0:25:66.21:0,66,1440	1/1:4,19:23:36.07:526,36,0	1/1:4,13:17:39.03:471,39,0	1/1:2,41:41:99:1525,111,0	1/1:7,7:13:5.94:88,6,0	0/0:22,0:22:54.10:0,54,1021	0/0:31,0:37:96.27:0,96,1867	0/0:16,0:17:42.12:0,42,864	0/0:22,0:24:66.19:0,66,1359	1/1:3,26:29:53.02:893,53,0	1/1:2,30:30:68.96:1006,69,0	1/1:0,5:5:12.04:175,12,0
chr10	101604580	.	AG	A	743.26	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.655;DP=686;FS=1.847;HRun=1;HaplotypeScore=62.2536;InbreedingCoeff=0.9997;MQ=79.33;MQ0=0;MQRankSum=-2.733;QD=35.39;ReadPosRankSum=1.010;VQSLOD=3.6189;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.26:0,81,1259	0/0:13,0:13:39.13:0,39,621	0/0:19,0:19:54.14:0,54,766	0/0:17,0:17:45.10:0,45,634	0/0:30,0:29:81.26:0,81,1238	0/0:25,0:25:75.26:0,75,1195	0/0:15,0:15:42.13:0,42,648	0/0:37,0:37:99:0,111,1644	0/0:22,0:22:66.19:0,66,1003	0/0:32,0:32:96.29:0,96,1448	0/0:25,0:25:75.26:0,75,1194	0/0:29,0:29:87.30:0,87,1384	0/0:28,0:28:84.17:0,84,1257	0/0:27,0:27:81.28:0,81,1293	0/0:27,0:27:81.24:0,81,1246	0/0:28,0:28:78.18:0,78,1209	0/0:13,0:13:39.12:0,39,599	1/1:0,21:21:60.20:838,60,0	0/0:16,0:16:48.15:0,48,733	0/0:34,0:34:99:0,102,1568	0/0:31,0:31:93.27:0,93,1413	0/0:20,0:20:60.18:0,60,912	0/0:31,0:31:93.32:0,93,1481	0/0:12,0:12:36.06:0,36,523	0/0:25,0:25:75.23:0,75,1152	0/0:32,0:32:93.30:0,93,1444	0/0:34,0:33:99:0,102,1545	0/0:15,0:15:45.15:0,45,717
chr10	101607725	.	CTGTGTGTG	C	1924.50	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.515;DP=645;FS=0.000;HRun=0;HaplotypeScore=184.3460;InbreedingCoeff=0.8103;MQ=58.61;MQ0=9;MQRankSum=-6.671;QD=24.06;ReadPosRankSum=1.337;VQSLOD=2.8950;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:23:15.18:0,15,491	0/0:8,0:11:15.05:0,15,539	0/0:37,0:17:3.01:0,3,72	0/0:30,0:15:6.02:0,6,103	1/1:11,3:14:3.01:40,3,0	0/0:27,0:28:51.16:0,51,1874	0/0:30,0:31:50.95:0,51,1537	0/0:20,0:18:15.05:0,15,570	0/0:22,0:24:34:0,34,1175	0/0:20,0:22:33.11:0,33,1001	0/0:19,0:19:36.11:0,36,1224	1/1:8,10:18:33.11:798,33,0	1/1:8,11:20:39.13:893,39,0	1/1:13,4:18:15.05:294,15,0	0/0:20,0:20:36.12:0,36,1419	0/0:9,0:11:21.06:0,21,671	0/0:14,0:31:36.59:0,37,1156	1/1:9,0:10:3.01:56,3,0	0/0:15,0:15:6.02:0,6,214	0/0:25,0:26:14.08:0,14,570	0/0:27,0:27:24.08:0,24,885	0/0:27,0:34:51.17:0,51,1854	0/0:27,0:27:39.13:0,39,1570	0/0:24,0:24:60.21:0,60,2213	0/0:23,0:32:56.95:0,57,2047	0/0:30,0:29:48.16:0,48,1692	0/0:20,0:21:21.07:0,21,778	0/0:17,0:18:30.08:0,30,1082
chr10	101607772	.	C	CAG	7794.33	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-4.406;DP=600;FS=5.815;HRun=0;HaplotypeScore=108.8855;InbreedingCoeff=0.9618;MQ=62.66;MQ0=6;MQRankSum=-4.127;QD=28.98;ReadPosRankSum=-2.253;VQSLOD=5.9577;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,9:20:20.96:338,21,0	1/1:3,7:10:15.05:246,15,0	0/0:35,0:18:33.08:0,33,392	0/0:38,0:21:24.50:0,25,435	1/1:4,15:19:39.13:639,39,0	0/0:22,0:22:60.15:0,60,742	0/0:24,0:24:33.06:0,33,393	1/1:7,20:27:29.42:973,29,0	0/0:14,0:14:32.83:0,33,370	0/0:26,0:26:54.17:0,54,670	0/0:15,0:15:33.10:0,33,409	1/1:7,11:18:29.96:491,30,0	1/1:8,12:21:36.07:590,36,0	1/1:4,17:22:48.16:778,48,0	0/0:18,0:18:33.10:0,33,409	1/1:6,11:18:27.07:408,27,0	0/0:24,0:23:42.13:0,42,514	1/1:4,0:7:6:53,6,0	1/1:3,11:15:39.13:638,39,0	1/1:7,9:16:23.84:394,24,0	1/1:2,18:20:45.01:736,45,0	0/0:34,0:34:22.72:0,23,756	0/0:30,0:30:60.19:0,60,743	0/0:21,0:21:57.18:0,57,699	0/0:30,0:30:42.13:0,42,521	1/1:11,11:21:4.93:579,5,0	1/1:5,16:22:42.14:685,42,0	1/1:6,5:11:15.05:246,15,0
chr10	101608024	.	TTTCTCTCC	T	4342.07	PASS	AB=1.000;AC=32;AF=0.593;AN=54;BaseQRankSum=4.347;DP=443;FS=4.245;HRun=0;HaplotypeScore=112.6741;InbreedingCoeff=0.5038;MQ=57.45;MQ0=31;MQRankSum=1.502;QD=16.02;ReadPosRankSum=-0.613;VQSLOD=3.8403;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:16:36.23:532,36,0	1/1:1,0:1:3.01:46,3,0	0/0:21,0:11:4.65:0,5,167	0/1:39,0:13:36.29:74,0,36	./.	0/1:25,0:24:97.82:98,0,549	0/0:20,0:19:46.92:0,47,712	1/1:1,16:16:42.02:487,42,0	0/1:12,0:11:15.76:16,0,264	0/1:24,0:24:1.65:2,0,757	0/0:19,0:19:43.49:0,43,651	1/1:6,0:6:9.50:139,10,0	1/1:11,0:7:18.06:286,18,0	1/1:10,0:9:24.05:324,24,0	0/0:10,0:10:21.05:0,21,305	0/1:5,0:5:39.92:188,0,40	0/1:27,0:26:60.26:60,0,440	1/1:4,0:4:10.91:82,11,0	1/1:0,7:7:21.01:282,21,0	1/1:3,11:12:9.03:113,9,0	1/1:13,0:12:14.54:275,15,0	0/0:26,0:25:17.32:0,17,663	0/0:25,0:24:24.42:0,24,720	0/0:17,0:14:28.45:0,28,382	0/0:24,0:24:57.13:0,57,795	1/1:14,0:14:37.32:519,37,0	1/1:13,0:12:33.10:495,33,0	1/1:11,0:9:27:326,27,0
chr10	101608030	.	TCC	T	1697.56	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=8.647;DP=431;FS=8.111;HRun=3;HaplotypeScore=83.0295;InbreedingCoeff=0.3907;MQ=53.98;MQ0=38;MQRankSum=-0.599;QD=6.87;ReadPosRankSum=0.302;VQSLOD=-0.2487;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:14:30.18:243,30,0	1/1:1,0:1:3:25,3,0	0/0:17,0:9:7.37:0,7,97	0/1:36,0:11:6.59:7,0,48	0/1:10,0:9:0:0,0,0	0/1:27,0:26:99:99,0,225	0/0:19,0:18:35.94:0,36,314	1/1:17,0:16:15:131,15,0	0/1:11,0:10:26.98:27,0,81	0/0:26,0:26:11.65:0,12,372	0/0:20,0:20:37.33:0,37,307	1/1:5,0:5:8.94:70,9,0	1/1:11,0:7:17.92:142,18,0	1/1:8,0:7:17.88:140,18,0	0/0:10,0:11:0.65:0,1,111	0/1:6,0:5:11.99:89,0,12	0/1:26,0:25:18.24:18,0,184	0/1:5,0:4:9.25:31,0,9	1/1:8,0:7:17.90:138,18,0	1/1:14,0:12:8.87:57,9,0	0/1:11,0:9:18.61:86,0,19	0/0:25,0:24:22.50:0,23,244	0/0:25,0:24:37.54:0,38,355	0/0:15,4:16:7.38:0,7,184	0/0:22,0:22:44.70:0,45,354	1/1:13,0:12:26.91:235,27,0	1/1:13,0:12:29.51:235,30,0	1/1:9,0:6:14.95:117,15,0
chr10	101608032	.	CCTCT	C	105.35	PASS	AB=0.960;AC=10;AF=0.294;AN=34;BaseQRankSum=1.284;DP=437;FS=1.585;HRun=0;HaplotypeScore=99.5760;InbreedingCoeff=0.0550;MQ=51.59;MQ0=42;MQRankSum=0.856;QD=0.69;ReadPosRankSum=2.272;VQSLOD=1.9493;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:15:2.08:0,2,17	./.	./.	./.	./.	0/1:26,0:25:15.59:16,0,34	0/1:19,0:18:0:0,0,0	./.	0/0:12,0:11:5.50:0,6,39	0/1:27,0:27:23.43:23,0,60	./.	0/1:6,0:5:0:0,0,0	./.	0/0:10,0:8:0:0,0,0	0/0:11,0:11:0:0,0,0	./.	0/1:17,8:24:32.59:82,0,33	1/1:5,0:4:5.99:53,6,0	0/0:9,0:8:1.55:0,2,4	./.	0/0:13,0:11:5.67:0,6,35	0/0:25,0:24:5.81:0,6,73	1/1:25,0:24:2.60:10,3,0	0/1:20,0:17:16.97:20,0,17	./.	0/0:12,0:10:4.72:0,5,33	0/0:15,0:14:3.91:0,4,22	./.
chr10	101609119	.	T	TAAG	17582.86	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-3.674;DP=647;FS=1.326;HRun=0;HaplotypeScore=122.4089;InbreedingCoeff=0.9906;MQ=80.32;MQ0=0;MQRankSum=-16.290;QD=52.17;ReadPosRankSum=0.985;VQSLOD=6.8745;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:45.12:956,45,0	1/1:2,5:7:21.07:432,21,0	0/0:26,0:25:66.22:0,66,1058	0/0:21,0:20:54.14:0,54,798	1/1:10,30:40:75.24:1622,75,0	0/0:26,0:26:78.25:0,78,1248	0/0:23,0:23:69.24:0,69,1124	1/1:8,26:34:81.27:1742,81,0	0/0:12,0:12:36.12:0,36,585	0/0:36,0:36:99:0,102,1642	0/0:32,0:32:87.30:0,87,1416	1/1:8,21:29:75.22:1584,75,0	1/1:3,19:22:63.22:1377,63,0	1/1:4,14:17:45.08:909,45,0	0/0:17,0:17:45.13:0,45,687	1/1:6,22:27:75.21:1584,75,0	0/0:27,0:27:81.25:0,81,1280	1/1:3,6:9:9.03:201,9,0	1/1:5,5:10:24.07:457,24,0	1/1:4,27:31:87.13:1812,87,0	1/1:7,8:15:20.99:374,21,0	0/0:15,0:15:42.14:0,42,677	0/0:37,0:37:99:0,102,1666	0/0:16,0:16:48.16:0,48,784	0/0:22,0:22:66.23:0,66,1078	1/1:4,23:27:75.21:1598,75,0	1/1:6,28:34:99:2131,99,0	1/1:0,14:14:36.12:804,36,0
chr10	101609166	.	AT	A	7256.97	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=18.525;DP=609;FS=0.000;HRun=6;HaplotypeScore=204.6185;InbreedingCoeff=0.9893;MQ=75.05;MQ0=0;MQRankSum=-17.140;QD=23.11;ReadPosRankSum=-1.252;VQSLOD=1.9797;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:16:27.06:290,27,0	1/1:1,9:10:18.04:193,18,0	0/0:20,0:20:50.84:0,51,597	0/0:18,0:18:45.12:0,45,549	1/1:3,41:44:59.88:644,60,0	0/0:31,0:31:90.29:0,90,1184	0/0:19,0:19:51.16:0,51,659	1/1:3,37:40:99:1192,111,0	0/0:20,0:20:54.18:0,54,710	0/0:39,0:39:99:0,111,1449	0/0:23,0:23:54.16:0,54,696	1/1:3,14:17:39.10:419,39,0	1/1:1,20:21:54.13:580,54,0	1/1:2,17:19:45.06:462,45,0	0/0:18,0:18:48.16:0,48,631	1/1:2,13:15:33.08:354,33,0	0/0:29,0:29:75.23:0,75,958	1/1:0,3:3:9.02:97,9,0	1/1:1,9:10:27.07:290,27,0	1/1:2,30:32:72.17:773,72,0	1/1:2,9:11:18.04:193,18,0	0/0:20,0:20:54.18:0,54,709	0/0:22,0:22:66.21:0,66,869	0/0:11,0:11:33.10:0,33,421	0/0:25,0:25:72.23:0,72,947	1/1:5,20:25:60.15:644,60,0	1/1:1,32:33:78.19:837,78,0	1/1:5,13:18:27.06:290,27,0
chr10	101609197	.	C	CATACACATATG	34824.79	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=9.735;DP=588;FS=4.420;HRun=0;HaplotypeScore=208.3633;InbreedingCoeff=0.9612;MQ=79.39;MQ0=0;MQRankSum=-18.443;QD=126.18;ReadPosRankSum=2.666;VQSLOD=5.0707;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,9:14:27.09:1353,27,0	1/1:2,9:12:30.10:1772,30,0	0/0:22,0:22:66.23:0,66,2265	0/0:18,0:18:41.14:0,41,1207	1/1:7,36:47:75.14:4379,75,0	0/0:30,0:30:90.29:0,90,2986	0/0:22,0:22:63.22:0,63,2300	1/1:14,10:24:63.22:3403,63,0	0/0:18,0:18:51.16:0,51,1689	0/0:39,0:39:99:0,117,4023	0/0:19,0:19:57.18:0,57,1924	1/1:4,12:18:36.12:2126,36,0	1/1:3,15:22:45.15:2630,45,0	1/1:0,14:13:36.12:2124,36,0	0/0:21,0:21:63.22:0,63,2268	1/1:4,11:16:33.11:1949,33,0	0/0:24,0:24:72.25:0,72,2641	1/1:0,2:2:6.02:355,6,0	1/1:5,3:8:24.07:930,24,0	1/1:7,26:35:78.27:4605,78,0	0/0:1,1:5:0:0,0,0	0/0:28,0:28:84.28:0,84,2842	0/0:24,0:24:72.21:0,72,2382	0/0:13,0:13:39.13:0,39,1293	0/0:29,0:29:84.28:0,84,2809	1/1:6,20:27:78.27:4384,78,0	1/1:4,16:23:51.18:2952,51,0	1/1:3,10:13:33.11:1863,33,0
chr10	101610596	.	CCAA	C	5102.31	PASS	AB=0.538;AC=28;AF=0.500;AN=56;BaseQRankSum=10.051;DP=331;FS=3.832;HRun=0;HaplotypeScore=61.1451;InbreedingCoeff=0.7630;MQ=77.76;MQ0=2;MQRankSum=-4.487;QD=28.83;ReadPosRankSum=2.772;VQSLOD=4.8119;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:17.54:79,18,0	1/1:5,0:5:0.06:12,0,0	0/0:17,0:14:40.20:0,40,529	0/0:8,0:8:14.59:0,15,174	1/1:19,0:19:17.10:158,17,0	0/0:10,0:10:30.09:0,30,598	0/0:11,0:11:33.10:0,33,685	1/1:1,20:21:60.19:937,60,0	0/0:5,0:5:15.04:0,15,304	0/0:12,0:12:36.12:0,36,789	0/0:21,0:21:63.20:0,63,1366	1/1:7,0:7:9.08:27,9,0	1/1:8,0:8:9.08:27,9,0	1/1:7,0:7:8.82:26,9,0	0/0:14,0:14:42.13:0,42,897	1/1:4,0:4:7.27:21,7,0	0/0:18,0:18:54.19:0,54,1139	0/1:1,7:8:51.83:236,0,52	1/1:0,15:15:45.12:697,45,0	1/1:0,23:23:69.06:1045,69,0	1/1:0,14:14:27.09:457,27,0	0/0:6,0:6:15.05:0,15,332	0/0:12,0:12:36.12:0,36,774	0/0:2,0:2:6.02:0,6,140	0/0:18,0:18:54.17:0,54,1161	0/1:2,11:13:99:520,0,101	1/1:0,13:13:29.77:506,30,0	1/1:0,9:9:21.07:356,21,0
chr10	101610597	.	CAA	C	4187.64	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=11.630;DP=331;FS=3.940;HRun=6;HaplotypeScore=58.4269;InbreedingCoeff=0.8177;MQ=77.76;MQ0=2;MQRankSum=-3.974;QD=23.66;ReadPosRankSum=1.804;VQSLOD=1.7210;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:27.09:355,27,0	1/1:1,4:5:15.04:184,15,0	0/0:17,0:14:27.41:0,27,345	0/0:8,0:8:11.62:0,12,143	1/1:1,18:19:53.69:646,54,0	0/0:10,0:10:27.09:0,27,465	0/0:11,0:11:30.09:0,30,495	1/1:21,0:21:57.57:480,58,0	0/0:5,0:5:12.04:0,12,210	0/0:12,0:12:36.11:0,36,588	0/0:22,0:22:63.21:0,63,1071	1/1:0,7:7:15.05:200,15,0	1/1:0,8:8:15.05:200,15,0	1/1:0,7:7:15.05:199,15,0	0/0:13,0:13:36.12:0,36,629	1/1:0,4:4:12.04:160,12,0	0/0:18,0:18:54.18:0,54,917	0/1:8,0:8:34.44:99,0,34	1/1:15,0:15:41.90:374,42,0	1/1:23,0:23:59.38:467,59,0	1/1:14,0:14:26.90:210,27,0	0/0:6,0:6:15.05:0,15,262	0/0:12,0:12:36.12:0,36,591	0/0:2,0:2:6.02:0,6,105	0/0:18,0:18:51.17:0,51,853	0/1:13,0:13:65.91:218,0,66	1/1:13,0:13:29.78:231,30,0	1/1:9,0:9:20.92:164,21,0
chr10	101610628	.	TTCAA	T	840.25	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.899;DP=388;FS=23.548;HRun=0;HaplotypeScore=83.6293;InbreedingCoeff=0.9179;MQ=78.29;MQ0=0;MQRankSum=-7.149;QD=35.01;ReadPosRankSum=0.322;VQSLOD=1.3436;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,12:13:32.98:507,33,0	1/1:1,4:5:9.03:168,9,0	0/0:10,0:10:26.12:0,26,615	0/0:10,0:10:20.39:0,20,464	0/0:24,0:24:63.17:0,63,1582	0/0:15,0:15:45.15:0,45,1200	0/0:14,0:14:39.13:0,39,994	0/0:23,0:23:60.20:0,60,1601	0/0:4,0:4:12.04:0,12,320	0/0:12,0:12:36.12:0,36,944	0/0:28,0:28:78.27:0,78,2039	0/0:11,0:11:24.08:0,24,640	0/0:14,0:14:36.12:0,36,918	0/0:8,0:8:18.06:0,18,461	0/0:11,0:11:33.11:0,33,870	1/1:0,6:6:18.03:301,18,0	0/0:25,0:25:72.20:0,72,1860	0/0:16,0:16:36.12:0,36,959	0/0:21,0:21:60.21:0,60,1588	0/0:24,0:24:63.22:0,63,1680	0/0:15,0:15:39.13:0,39,1040	0/0:5,0:5:15.05:0,15,400	0/0:18,0:18:54.19:0,54,1428	0/0:2,0:2:6.02:0,6,160	0/0:12,0:12:36.12:0,36,918	0/0:15,0:15:39.13:0,39,1040	0/0:19,0:19:48.16:0,48,1281	0/0:8,0:8:24.08:0,24,603
chr10	101610669	.	AT	A	544.56	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.203;DP=442;FS=0.870;HRun=5;HaplotypeScore=55.1412;InbreedingCoeff=0.9148;MQ=74.64;MQ0=0;MQRankSum=-3.647;QD=18.15;ReadPosRankSum=0.440;VQSLOD=2.9597;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:36.10:407,36,0	1/1:1,5:6:9.02:102,9,0	0/0:5,0:5:15.05:0,15,205	0/0:12,0:12:32.98:0,33,379	0/0:33,0:33:87.27:0,87,1170	0/0:23,0:23:69.22:0,69,927	0/0:12,0:12:33.09:0,33,434	0/0:26,0:26:72.23:0,72,970	0/0:4,0:4:12.04:0,12,164	0/0:23,0:23:69.23:0,69,936	0/0:24,0:24:72.23:0,72,970	0/0:11,0:11:24.07:0,24,312	0/0:17,0:17:36.12:0,36,492	0/0:7,0:7:18.05:0,18,232	0/0:12,0:12:36.11:0,36,478	1/1:1,6:7:15.04:170,15,0	0/0:25,0:25:66.21:0,66,886	0/0:19,0:19:48.16:0,48,655	0/0:26,0:26:75.25:0,75,1023	0/0:25,0:25:69.14:0,69,901	0/0:16,0:16:39.11:0,39,516	0/0:6,0:6:18.05:0,18,230	0/0:17,0:17:48.16:0,48,656	0/0:3,0:3:6.02:0,6,82	0/0:13,0:13:33.11:0,33,451	0/0:17,0:17:51.16:0,51,684	0/0:24,0:24:63.16:0,63,832	0/0:12,0:12:30.10:0,30,410
chr10	101610738	.	C	CT	7185.31	PASS	AB=0.594;AC=23;AF=0.411;AN=56;BaseQRankSum=-14.250;DP=479;FS=14.524;HRun=6;HaplotypeScore=42.9070;InbreedingCoeff=0.8941;MQ=65.39;MQ0=0;MQRankSum=1.309;QD=30.45;ReadPosRankSum=1.014;VQSLOD=3.8377;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:42.10:0,42,427	0/0:4,0:4:9.02:0,9,92	0/0:9,0:8:23.96:0,24,217	0/0:9,0:7:3.31:0,3,138	1/1:4,26:30:72.23:905,72,0	0/0:18,0:18:51.10:0,51,514	0/0:10,0:10:30.05:0,30,300	1/1:4,21:25:63.20:792,63,0	0/0:9,0:9:27.06:0,27,276	0/0:30,0:30:84.17:0,84,848	0/0:24,0:24:69.14:0,69,696	1/1:0,12:12:30.10:377,30,0	1/1:1,17:18:45.14:566,45,0	1/1:1,16:17:45.14:566,45,0	0/0:22,0:22:63.14:0,63,642	0/0:13,0:12:39.09:0,39,398	0/0:14,0:14:39.09:0,39,398	1/1:5,18:23:54.17:679,54,0	1/1:5,20:25:60.19:755,60,0	1/1:2,25:27:72.23:906,72,0	1/1:1,10:11:27.09:340,27,0	0/0:16,0:16:48.11:0,48,490	0/0:11,0:11:33.07:0,33,336	0/0:9,0:9:27.06:0,27,275	0/0:28,0:28:81.18:0,81,826	0/1:6,13:19:43.71:430,0,44	1/1:3,14:17:33.11:415,33,0	1/1:0,12:12:36.12:453,36,0
chr10	101610957	.	TG	T	6141.03	PASS	AB=0.600;AC=29;AF=0.518;AN=56;BaseQRankSum=19.348;DP=746;FS=4.063;HRun=1;HaplotypeScore=154.7838;InbreedingCoeff=0.8984;MQ=67.70;MQ0=0;MQRankSum=-4.968;QD=17.15;ReadPosRankSum=3.484;VQSLOD=5.3884;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,27:37:44.89:692,45,0	1/1:0,6:6:17.87:132,18,0	0/0:24,0:21:63.09:0,63,776	0/0:32,0:32:80.35:0,80,952	1/1:4,20:24:36.29:464,36,0	0/0:28,0:28:84.24:0,84,1146	0/0:22,0:22:65.64:0,66,839	1/1:17,11:29:29.82:386,30,0	0/0:16,0:16:48.14:0,48,658	0/0:49,0:49:99:0,137,1904	0/0:35,0:35:99:0,105,1416	1/1:7,21:28:53.24:600,53,0	1/1:5,18:23:51.21:470,51,0	1/1:7,17:24:19.82:401,20,0	0/0:39,0:39:99:0,117,1587	1/1:6,8:14:18.22:254,18,0	0/0:24,0:24:72.19:0,72,968	1/1:16,15:31:23.33:444,23,0	0/1:9,12:27:16.56:321,0,17	1/1:9,17:26:30.46:443,30,0	1/1:10,18:28:42.43:480,42,0	0/0:30,0:30:90.26:0,90,1218	0/0:25,0:25:75.23:0,75,1051	0/0:35,0:35:99:0,105,1484	0/0:29,0:29:87.25:0,87,1189	1/1:12,16:28:5.19:485,5,0	1/1:9,19:28:38.16:454,38,0	1/1:2,3:5:7.11:113,7,0
chr10	101610959	.	TTG	T	5863.01	PASS	AB=0.653;AC=22;AF=0.393;AN=56;BaseQRankSum=18.159;DP=737;FS=6.288;HRun=0;HaplotypeScore=168.6400;InbreedingCoeff=0.4202;MQ=66.67;MQ0=0;MQRankSum=-7.062;QD=16.66;ReadPosRankSum=4.824;VQSLOD=4.2667;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,27:37:4.72:632,5,0	1/1:1,6:7:17.92:141,18,0	0/0:25,0:22:63.21:0,63,1058	0/0:32,0:32:81.41:0,81,1314	1/1:4,20:24:18.95:456,19,0	0/0:27,0:27:81.28:0,81,1498	0/0:21,0:21:63.21:0,63,1145	0/1:16,10:26:29.18:310,0,29	0/0:16,0:16:48.16:0,48,864	0/0:49,0:49:99:0,141,2580	0/0:34,0:34:99:0,99,1800	1/1:8,21:29:21.91:577,22,0	1/1:5,18:23:36.81:484,37,0	0/1:7,17:24:18.51:389,0,19	0/0:39,0:39:99:0,114,2073	0/1:6,8:14:3.06:247,0,3	0/0:24,0:24:72.24:0,72,1304	0/1:13,16:29:46.51:417,0,47	0/1:15,12:27:77.82:302,0,78	0/1:8,17:25:8.02:420,0,8	1/1:10,18:28:21.86:489,22,0	0/0:30,0:30:90.30:0,90,1634	0/0:24,0:24:72.25:0,72,1370	0/0:35,0:35:99:0,105,1957	0/0:29,0:29:87.30:0,87,1615	0/1:11,15:26:33.24:488,0,33	1/1:10,18:28:6.22:443,6,0	0/1:3,2:5:5.21:69,0,5
chr10	101611214	.	T	TA	534.57	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.162;DP=754;FS=1.005;HRun=2;HaplotypeScore=77.1933;InbreedingCoeff=0.9900;MQ=89.76;MQ0=0;MQRankSum=-2.318;QD=31.45;ReadPosRankSum=0.880;VQSLOD=3.3600;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1592	0/0:6,0:6:18.06:0,18,234	0/0:31,0:31:90.29:0,90,1159	0/0:30,0:30:81.21:0,81,1002	0/0:25,0:25:72.20:0,72,901	0/0:24,0:24:66.21:0,66,857	0/0:20,0:20:57.19:0,57,739	0/0:37,0:37:99:0,105,1336	0/0:22,0:22:63.20:0,63,816	0/0:32,0:32:93.08:0,93,1166	0/0:30,0:30:81.26:0,81,1050	0/0:29,0:29:87.27:0,87,1115	0/0:34,0:34:90.29:0,90,1169	0/0:34,0:34:99:0,102,1324	0/0:38,0:38:99:0,99,1286	0/0:22,0:22:63.20:0,63,818	0/0:27,0:27:78.25:0,78,1013	1/1:2,15:17:42.14:629,42,0	0/0:17,0:17:48.16:0,48,620	0/0:35,0:35:99:0,99,1271	0/0:36,0:36:99:0,105,1362	0/0:28,0:28:81.26:0,81,1051	0/0:26,0:26:66.21:0,66,857	0/0:18,0:18:54.18:0,54,700	0/0:26,0:26:78.25:0,78,1013	0/0:25,0:25:75.23:0,75,960	0/0:34,0:34:99:0,99,1279	0/0:9,0:9:24.03:0,24,265
chr10	101611626	.	GA	G	3131.06	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.460;DP=576;FS=3.995;HRun=8;HaplotypeScore=53.7902;InbreedingCoeff=0.9868;MQ=71.50;MQ0=0;MQRankSum=-0.932;QD=21.90;ReadPosRankSum=2.440;VQSLOD=4.1461;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:54.08:521,54,0	1/1:1,10:11:27.04:261,27,0	0/0:13,0:13:33.07:0,33,378	0/0:7,0:7:18.06:0,18,217	1/1:1,30:31:81.12:782,81,0	0/0:23,0:23:66.20:0,66,797	0/0:8,0:8:21.06:0,21,254	0/0:32,0:32:96.28:0,96,1149	0/0:16,0:16:48.15:0,48,578	0/0:38,0:39:99:0,111,1326	0/0:23,0:23:63.19:0,63,761	1/1:1,21:22:54.09:522,54,0	1/1:1,16:17:21.35:382,21,0	1/1:1,17:19:48.08:464,48,0	0/0:25,0:25:69.20:0,69,822	1/1:1,3:4:9.01:87,9,0	0/0:15,0:15:42.13:0,42,507	1/1:4,15:19:33.05:319,33,0	0/0:21,0:21:60.17:0,60,715	0/0:40,0:40:99:0,108,1293	0/0:11,0:11:30.06:0,30,345	0/0:26,0:26:69.21:0,69,833	0/0:24,0:24:69.21:0,69,833	0/0:11,0:11:24.07:0,24,290	0/0:18,0:18:45.14:0,45,544	0/0:32,0:32:84.25:0,84,1005	0/0:32,0:31:84.26:0,84,1013	0/0:16,0:17:48.48:0,48,559
chr10	101612239	.	CAAAA	C	5461.83	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=2.313;DP=508;FS=2.285;HRun=13;HaplotypeScore=98.5130;InbreedingCoeff=0.9869;MQ=70.69;MQ0=5;MQRankSum=-2.841;QD=32.13;ReadPosRankSum=3.605;VQSLOD=4.2983;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:51.16:746,51,0	1/1:1,10:11:24.06:351,24,0	0/0:29,0:20:40.94:0,41,645	0/0:19,0:14:15.05:0,15,231	0/0:4,0:27:63.49:0,63,465	0/0:15,0:18:54.18:0,54,1159	0/0:12,0:17:36.12:0,36,755	1/1:2,12:14:33.05:461,33,0	0/0:14,0:17:39.12:0,39,839	0/0:26,0:29:75.26:0,75,1667	0/0:18,0:18:48.16:0,48,1080	0/0:3,0:22:55.65:0,56,345	0/0:7,0:21:26.32:0,26,154	0/0:2,0:23:64.44:0,64,398	0/0:12,0:14:30.10:0,30,640	1/1:1,11:12:27.07:395,27,0	0/0:14,0:14:42.14:0,42,976	1/1:2,9:11:18:239,18,0	1/1:1,10:11:27.03:395,27,0	1/1:6,26:32:56.99:820,57,0	1/1:1,9:10:24.03:327,24,0	0/0:16,0:16:42.13:0,42,930	0/0:12,0:13:33.11:0,33,704	0/0:10,0:12:30.10:0,30,677	0/0:26,0:26:60.15:0,60,1281	1/1:1,20:21:57.17:806,57,0	1/1:1,19:21:36.56:790,37,0	1/1:0,3:3:9.03:132,9,0
chr10	101612419	.	G	GA	14387.54	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-15.804;DP=688;FS=3.252;HRun=1;HaplotypeScore=60.8898;InbreedingCoeff=0.9988;MQ=84.88;MQ0=0;MQRankSum=-3.361;QD=39.97;ReadPosRankSum=0.990;VQSLOD=5.5098;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:66.22:989,66,0	1/1:0,10:10:30.10:450,30,0	0/0:24,0:24:60.23:0,60,878	0/0:20,0:20:57.17:0,57,720	1/1:3,25:28:72.20:1054,72,0	0/0:30,0:30:90.28:0,90,1153	0/0:19,0:19:57.19:0,57,740	1/1:2,31:33:93.30:1373,93,0	0/0:27,0:27:75.24:0,75,974	0/0:35,0:35:99:0,105,1351	0/0:25,0:25:72.20:0,72,906	1/1:1,23:24:57.19:855,57,0	1/1:0,26:26:75.25:1124,75,0	1/1:0,19:19:51.17:765,51,0	0/0:17,0:17:48.16:0,48,623	1/1:0,20:20:48.16:720,48,0	0/0:29,0:29:84.25:0,84,1072	1/1:1,20:21:58.76:896,59,0	1/1:1,25:26:52.29:992,52,0	1/1:1,33:34:93.25:1346,93,0	1/1:1,26:27:75.25:1124,75,0	0/0:29,0:29:78.24:0,78,998	0/0:29,0:29:84.26:0,84,1074	0/0:13,0:13:36.12:0,36,466	0/0:31,0:31:93.30:0,93,1204	1/1:2,31:33:57.31:1308,57,0	1/1:1,27:28:75.25:1124,75,0	1/1:0,6:6:18.06:270,18,0
chr10	101613139	.	AT	A	9384.69	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=14.229;DP=638;FS=3.476;HRun=8;HaplotypeScore=63.2488;InbreedingCoeff=0.9969;MQ=83.86;MQ0=0;MQRankSum=-2.439;QD=26.07;ReadPosRankSum=1.786;VQSLOD=5.7994;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,39:41:99:1043,108,0	1/1:0,16:16:48.08:464,48,0	0/0:22,0:22:54.02:0,54,589	0/0:16,0:16:19.26:0,19,466	1/1:1,26:27:63.09:608,63,0	0/0:31,0:31:90.26:0,90,1076	0/0:21,0:21:54.15:0,54,641	1/1:1,29:30:84.11:804,84,0	0/0:20,0:20:42.12:0,42,497	0/0:31,0:31:87.27:0,87,1049	0/0:20,0:20:57.17:0,57,689	1/1:0,25:25:69.11:666,69,0	1/1:2,20:22:48.08:463,48,0	1/1:2,29:31:78.12:753,78,0	0/0:22,0:22:60.18:0,60,724	1/1:2,18:19:51.08:493,51,0	0/0:15,0:15:42.13:0,42,507	1/1:2,16:18:48.05:457,48,0	1/1:0,11:11:33.04:313,33,0	1/1:0,28:29:83.16:788,83,0	1/1:1,25:26:75.12:724,75,0	0/0:18,0:19:51.02:0,51,595	0/0:27,0:27:72.20:0,72,856	0/0:15,0:15:42.13:0,42,507	0/0:19,0:19:48.15:0,48,580	1/1:1,28:29:84.07:795,84,0	1/1:0,30:30:90.15:869,90,0	1/1:0,5:5:15.02:145,15,0
chr10	101613600	.	A	AATGT	3492.72	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-3.692;DP=434;FS=0.603;HRun=0;HaplotypeScore=78.0713;InbreedingCoeff=0.9414;MQ=73.16;MQ0=0;MQRankSum=0.398;QD=42.08;ReadPosRankSum=1.228;VQSLOD=3.9790;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:13:0,13,638	0/0:6,0:6:12.04:0,12,201	0/0:19,0:17:18.94:0,19,265	0/0:12,0:11:17.99:0,18,254	1/1:11,14:25:45.15:1082,45,0	0/0:23,0:23:51.16:0,51,819	0/0:14,0:14:27.06:0,27,396	0/0:39,0:38:75.21:0,75,1108	0/0:13,0:13:33.08:0,33,492	0/0:11,0:11:24.08:0,24,400	0/0:17,0:17:39.12:0,39,621	1/1:10,8:18:30.07:641,30,0	1/1:10,12:22:51.11:1057,51,0	1/1:11,7:18:42.05:713,42,0	0/0:9,0:9:21.06:0,21,326	0/0:14,0:14:36.12:0,36,599	0/0:16,0:16:36.12:0,36,599	0/0:14,0:14:33.07:0,33,505	0/0:11,0:11:30.10:0,30,498	0/0:10,0:10:15.05:0,15,244	0/0:16,0:16:36.08:0,36,532	0/0:5,0:5:6.02:0,6,100	0/0:7,0:7:15.05:0,15,247	0/0:11,0:11:24.02:0,24,339	0/0:16,0:16:45.14:0,45,722	0/0:13,0:13:39.13:0,39,650	0/0:19,0:19:42.14:0,42,694	0/0:11,0:11:27.07:0,27,416
chr10	101613660	.	C	CTA	7907.84	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=3.520;DP=312;FS=0.466;HRun=0;HaplotypeScore=46.5751;InbreedingCoeff=0.8651;MQ=70.09;MQ0=0;MQRankSum=-1.348;QD=38.57;ReadPosRankSum=-2.368;VQSLOD=5.4658;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:36.12:639,36,0	1/1:0,3:3:9.03:160,9,0	0/0:6,0:6:9:0,9,91	0/1:7,0:6:24.94:25,0,30	1/1:2,7:9:15.05:265,15,0	0/0:18,0:18:48.16:0,48,659	0/0:3,0:3:9.03:0,9,124	1/1:8,37:45:99:1828,111,0	0/0:7,0:7:18.06:0,18,246	0/0:6,0:6:18.06:0,18,243	0/0:11,0:11:30.09:0,30,396	1/1:1,11:12:24.08:409,24,0	1/1:0,6:7:15.05:266,15,0	1/1:2,9:11:27.07:431,27,0	0/0:5,0:5:15.05:0,15,206	1/1:2,8:10:18.06:319,18,0	0/0:24,0:24:69.22:0,69,931	1/1:2,12:14:33.11:585,33,0	1/1:0,18:19:57.15:931,57,0	1/1:0,7:8:15.05:266,15,0	1/1:0,4:4:9.03:160,9,0	0/0:6,0:6:18.06:0,18,247	0/0:5,0:5:15.05:0,15,204	0/0:2,0:2:6.02:0,6,82	0/0:14,0:14:39.13:0,39,536	1/1:2,8:11:27.08:452,27,0	1/1:1,14:15:33.11:586,33,0	1/1:1,11:12:33.11:585,33,0
chr10	101613946	.	T	TA	281.57	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-0.165;DP=420;FS=3.737;HRun=7;HaplotypeScore=45.2331;InbreedingCoeff=0.5723;MQ=67.97;MQ0=0;MQRankSum=-0.777;QD=11.26;ReadPosRankSum=-2.154;VQSLOD=1.2116;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:45.07:0,45,435	0/0:5,0:5:15.02:0,15,145	0/0:16,0:14:3.60:0,4,128	0/1:9,0:8:16.76:17,0,105	0/0:21,0:21:57.09:0,57,550	0/0:20,0:20:57.09:0,57,550	0/0:10,0:10:24.02:0,24,225	0/0:32,0:32:87.13:0,87,840	0/0:15,0:15:45.07:0,45,434	0/0:22,0:22:63.10:0,63,607	0/0:8,0:8:21.03:0,21,202	0/0:12,0:12:29.98:0,30,279	0/0:13,0:13:36.50:0,37,339	0/0:11,0:11:27.04:0,27,261	0/0:16,0:16:45.07:0,45,435	0/0:11,0:11:30.05:0,30,289	0/0:14,0:14:33.05:0,33,319	1/1:5,11:16:32.59:370,33,0	0/0:13,0:13:36.06:0,36,347	0/0:17,0:17:45.07:0,45,435	0/0:9,0:9:24.04:0,24,232	0/0:12,0:12:33.04:0,33,313	0/0:7,0:6:21.03:0,21,203	0/0:20,0:20:57.03:0,57,525	0/0:12,0:12:33.05:0,33,319	0/0:24,0:24:66.10:0,66,637	0/0:26,0:26:63.10:0,63,608	0/0:10,0:11:29.08:0,29,267
chr10	101614735	.	GA	G	4736.53	PASS	AB=0.556;AC=21;AF=0.375;AN=56;BaseQRankSum=11.369;DP=618;FS=8.304;HRun=10;HaplotypeScore=112.8710;InbreedingCoeff=0.8933;MQ=73.49;MQ0=0;MQRankSum=-6.160;QD=21.05;ReadPosRankSum=0.351;VQSLOD=4.2747;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,27:36:86.91:743,87,0	1/1:0,9:9:26.99:234,27,0	0/0:19,2:21:19.53:0,20,436	0/0:13,0:13:23.86:0,24,254	0/0:35,0:35:67.95:0,68,933	0/0:19,1:20:28.07:0,28,523	0/0:22,0:22:57.15:0,57,630	1/1:6,25:31:43.49:597,43,0	0/0:16,0:16:42.11:0,42,464	0/0:26,0:26:63.13:0,63,675	0/0:21,0:21:58.38:0,58,623	0/0:20,0:20:51.09:0,51,548	0/0:21,0:21:51:0,51,564	0/0:19,1:20:25.12:0,25,488	0/0:27,1:29:54.98:0,55,803	1/1:1,18:19:56.97:490,57,0	0/0:24,0:27:70.90:0,71,775	1/1:6,11:17:35.92:304,36,0	0/1:4,16:20:9.38:385,0,9	1/1:4,24:29:65.92:568,66,0	1/1:5,10:15:8.81:305,9,0	0/0:26,0:26:66.61:0,67,699	0/0:23,1:24:35.43:0,35,562	0/0:32,0:32:84.19:0,84,904	0/0:19,1:20:16.05:0,16,398	1/1:4,23:27:74.46:623,74,0	1/1:4,17:21:53.94:461,54,0	1/1:0,1:1:3:26,3,0
chr10	101614775	.	CATAT	C	6565.51	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=3.679;DP=610;FS=1.208;HRun=0;HaplotypeScore=141.2077;InbreedingCoeff=0.9808;MQ=66.53;MQ0=0;MQRankSum=-4.127;QD=37.30;ReadPosRankSum=2.192;VQSLOD=5.1031;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,31:37:75.23:1267,75,0	1/1:0,9:9:27.09:466,27,0	0/0:11,0:11:8.98:0,9,166	0/0:14,0:11:17.99:0,18,226	1/1:4,28:32:78.22:1315,78,0	0/0:21,0:22:56.98:0,57,1371	0/0:23,0:24:56.98:0,57,1314	0/0:15,0:36:67.56:0,68,334	0/0:18,0:19:56.98:0,57,1378	0/0:24,0:27:71.61:0,72,1607	0/0:18,0:20:56.74:0,57,1142	1/1:4,20:24:48.16:829,48,0	1/1:1,26:27:57.15:953,57,0	1/1:3,17:20:45.15:777,45,0	0/0:22,0:23:59.99:0,60,1446	1/1:6,21:27:57.16:958,57,0	0/0:23,0:26:62.58:0,63,1402	0/0:4,0:14:27.09:0,27,492	0/0:5,0:17:39.75:0,40,213	0/0:4,0:24:47.98:0,48,247	0/0:3,1:17:31.25:0,31,140	0/0:26,0:27:69.02:0,69,1585	0/0:20,0:21:59.99:0,60,1453	0/0:25,0:27:63:0,63,1507	0/0:16,0:17:50.95:0,51,1177	0/0:6,0:21:56.24:0,56,295	0/0:5,0:23:46.40:0,46,245	0/0:0,0:4:11.19:0,11,51
chr10	101616488	.	T	TCTCC	4740.21	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=0.866;DP=632;FS=8.268;HRun=0;HaplotypeScore=123.9681;InbreedingCoeff=0.9582;MQ=83.61;MQ0=0;MQRankSum=-5.047;QD=66.76;ReadPosRankSum=2.560;VQSLOD=7.0705;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,29:35:99:2412,99,0	1/1:1,3:4:6.02:157,6,0	0/0:26,0:24:60.20:0,60,1037	0/0:36,0:34:74.19:0,74,1176	0/0:13,0:13:36.09:0,36,621	0/0:28,0:28:58.63:0,59,1133	0/0:21,0:21:60.17:0,60,1031	0/0:28,0:28:63.20:0,63,1080	0/0:24,0:24:63.20:0,63,1115	0/0:29,0:30:66.23:0,66,1197	0/0:19,0:19:44.95:0,45,818	0/0:22,0:22:57.20:0,57,1032	0/0:16,0:16:45.14:0,45,786	0/0:13,0:13:27.08:0,27,449	0/0:23,0:23:66.23:0,66,1194	1/1:1,28:32:84.29:2171,84,0	0/0:31,0:31:78.66:0,79,1501	0/0:10,0:10:21.05:0,21,334	0/0:16,0:16:36.12:0,36,650	0/0:29,0:29:81.25:0,81,1435	0/0:39,0:39:95.40:0,95,1714	0/0:27,0:27:60.18:0,60,1027	0/0:18,0:18:45.15:0,45,803	0/0:16,0:16:48.16:0,48,873	0/0:22,0:22:57.20:0,57,1037	0/0:24,0:24:54.18:0,54,945	0/0:20,0:20:51.17:0,51,915	0/0:10,0:9:21.07:0,21,382
chr10	101616730	.	G	GCT	8306.23	PASS	AB=0.793;AC=22;AF=0.393;AN=56;BaseQRankSum=-16.100;DP=779;FS=14.195;HRun=0;HaplotypeScore=98.4400;InbreedingCoeff=0.8532;MQ=74.76;MQ0=2;MQRankSum=0.140;QD=26.62;ReadPosRankSum=-0.169;VQSLOD=5.3101;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,30:41:69.24:1119,69,0	1/1:1,12:13:33.11:535,33,0	0/0:31,0:29:27.85:0,28,440	0/1:38,0:32:6.03:6,0,397	0/0:33,0:33:81.23:0,81,976	0/0:25,0:26:60:0,60,698	0/0:32,0:33:71.78:0,72,843	1/1:10,22:32:35.51:951,36,0	0/0:24,0:26:62.84:0,63,710	0/0:33,0:33:69.21:0,69,835	0/0:20,0:20:54.15:0,54,647	0/0:24,0:25:63.02:0,63,735	0/0:27,0:29:77.87:0,78,882	0/0:32,0:33:78.24:0,78,953	0/0:24,0:24:57.18:0,57,696	1/1:8,23:31:57.19:925,57,0	0/0:36,0:36:85.89:0,86,1048	1/1:4,17:21:45.15:728,45,0	1/1:7,13:21:8.48:585,8,0	0/1:6,17:24:5.66:588,0,6	1/1:5,25:32:60.20:974,60,0	0/0:25,0:25:63.20:0,63,770	0/0:24,0:25:50.91:0,51,599	0/0:41,0:42:99:0,108,1270	0/0:24,0:24:45.12:0,45,537	1/1:5,23:30:27.40:1067,27,0	1/1:5,18:22:14.50:732,15,0	1/1:2,3:6:6.02:97,6,0
chr10	101616986	.	GA	G	426.61	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.459;DP=640;FS=1.882;HRun=8;HaplotypeScore=74.8930;InbreedingCoeff=0.9414;MQ=81.36;MQ0=0;MQRankSum=-2.764;QD=21.33;ReadPosRankSum=-0.751;VQSLOD=3.4604;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.24:0,78,940	0/0:17,0:17:45.11:0,45,528	0/0:22,0:21:9.58:0,10,398	0/0:12,0:12:23.38:0,23,231	0/0:35,0:35:96.28:0,96,1148	0/0:22,0:22:51.16:0,51,616	0/0:20,0:20:57.17:0,57,689	0/0:29,0:29:78.22:0,78,919	0/0:19,0:19:57.16:0,57,676	0/0:25,0:26:72.07:0,72,828	0/0:22,0:22:63.18:0,63,748	0/0:20,0:20:51.15:0,51,606	0/0:19,0:19:51.16:0,51,616	0/0:21,0:21:57.17:0,57,689	0/0:28,0:28:75.22:0,75,893	0/0:15,0:15:39.09:0,39,457	0/0:24,0:24:69.21:0,69,834	1/1:1,19:20:54.09:521,54,0	0/0:24,0:24:51.16:0,51,616	0/0:20,0:20:57.17:0,57,678	0/0:15,0:15:42.12:0,42,497	0/0:24,0:24:63.17:0,63,740	0/0:37,0:37:99:0,102,1229	0/0:19,0:19:48.11:0,48,564	0/0:31,0:31:90.28:0,90,1086	0/0:34,0:34:93.26:0,93,1094	0/0:30,0:30:84.25:0,84,1003	0/0:8,0:8:18.04:0,18,207
chr10	101617045	.	CT	C	2905.24	PASS	AB=0.885;AC=18;AF=0.321;AN=56;BaseQRankSum=10.167;DP=638;FS=1.606;HRun=10;HaplotypeScore=67.1438;InbreedingCoeff=0.6361;MQ=75.63;MQ0=1;MQRankSum=0.063;QD=12.47;ReadPosRankSum=0.407;VQSLOD=3.4139;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.13:0,69,739	0/0:18,0:18:39.11:0,39,431	0/0:19,2:20:12.66:0,13,365	0/1:12,2:12:18.95:19,0,112	0/0:35,3:38:76.23:0,76,1069	0/0:25,1:27:42.94:0,43,670	0/1:15,3:18:16.01:16,0,296	1/1:10,22:32:65.96:569,66,0	0/0:12,0:12:33.09:0,33,365	0/0:33,0:33:55.26:0,55,827	0/0:23,0:23:63.17:0,63,697	0/0:16,1:17:16.06:0,16,405	0/0:26,0:26:61.38:0,61,654	0/1:15,2:17:6.99:7,0,386	0/0:22,0:23:62.98:0,63,661	0/0:12,1:13:10.04:0,10,339	0/0:30,0:32:86.89:0,87,918	0/1:17,2:19:12.99:13,0,326	1/1:6,17:23:50.97:439,51,0	1/1:3,23:26:47.33:544,47,0	1/1:2,11:13:2.81:253,3,0	0/0:23,0:23:48.13:0,48,531	0/0:25,0:25:72.15:0,72,776	0/0:17,0:17:45.10:0,45,488	0/0:31,0:31:55.52:0,56,747	1/1:7,25:32:26.67:595,27,0	1/1:5,27:32:38.81:566,39,0	1/1:2,4:6:9:78,9,0
chr10	101618127	.	G	GC	16168.94	PASS	AB=0.542;AC=29;AF=0.518;AN=56;BaseQRankSum=-4.221;DP=765;FS=3.003;HRun=1;HaplotypeScore=81.3334;InbreedingCoeff=0.9240;MQ=90.58;MQ0=0;MQRankSum=-4.572;QD=40.02;ReadPosRankSum=1.462;VQSLOD=5.5189;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,45:46:99:1934,129,0	1/1:0,13:13:36.12:540,36,0	0/0:29,0:29:84.23:0,84,1026	0/0:29,0:29:66.26:0,66,860	1/1:1,27:28:75.25:1124,75,0	0/0:21,0:21:63.20:0,63,818	0/0:39,0:39:99:0,117,1519	1/1:1,34:35:99:1452,99,0	0/0:17,0:17:48.16:0,48,623	0/0:36,0:36:99:0,105,1364	0/0:24,0:24:72.23:0,72,934	1/1:0,35:36:99:1461,99,0	1/1:0,27:27:72.24:1079,72,0	1/1:0,34:34:99:1484,99,0	0/0:33,0:33:93.30:0,93,1208	1/1:2,22:24:66.22:977,66,0	0/0:33,2:35:12.40:0,12,1157	1/1:0,15:15:45.15:674,45,0	1/1:3,15:18:31.69:695,32,0	1/1:2,23:25:60.20:899,60,0	1/1:2,31:33:81.27:1214,81,0	0/0:28,0:28:84.26:0,84,1077	0/0:24,0:24:72.23:0,72,934	0/0:29,0:29:84.27:0,84,1090	0/0:17,0:17:45.12:0,45,568	0/1:4,22:26:77.61:911,0,78	1/1:2,34:37:96.32:1410,96,0	1/1:0,7:7:21.07:315,21,0
chr10	101618948	.	C	CAGAG	4628.38	PASS	AB=0.976;AC=25;AF=0.446;AN=56;BaseQRankSum=7.768;DP=698;FS=16.637;HRun=0;HaplotypeScore=150.4727;InbreedingCoeff=0.5547;MQ=55.99;MQ0=13;MQRankSum=-4.709;QD=14.20;ReadPosRankSum=0.148;VQSLOD=3.4599;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,17:23:9.03:231,9,0	1/1:7,4:11:20.55:400,21,0	0/0:25,0:11:19.52:0,20,173	0/0:38,0:14:6.45:0,6,189	1/1:24,0:23:0.58:12,1,0	0/0:30,0:30:75.22:0,75,1212	0/0:17,0:17:41.94:0,42,682	0/1:33,0:26:6.65:247,0,7	0/0:37,0:36:90.22:0,90,1484	0/0:20,0:18:51.16:0,51,827	0/0:20,0:20:45.12:0,45,724	0/1:29,0:29:26.17:62,0,26	0/1:33,0:33:40.84:89,0,41	0/1:16,0:16:18.03:42,0,18	0/0:26,0:26:60.19:0,60,1019	1/1:4,20:26:27.09:617,27,0	0/0:44,0:44:86.09:0,86,1445	0/1:25,4:29:99:384,0,549	1/1:7,1:5:9.02:179,9,0	1/1:1,18:21:15.05:385,15,0	1/1:7,13:19:6.02:154,6,0	0/0:25,0:25:72.16:0,72,1124	0/0:27,0:27:60.19:0,60,1000	0/0:33,0:32:69.41:0,69,1294	0/0:30,0:30:78.25:0,78,1319	1/1:4,18:22:51.18:1252,51,0	1/1:2,21:25:23.99:503,24,0	1/1:6,0:6:6:74,6,0
chr10	101618952	.	GAGAGAC	G	2524.95	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=5.612;DP=689;FS=1.865;HRun=0;HaplotypeScore=173.9564;InbreedingCoeff=0.5296;MQ=59.17;MQ0=13;MQRankSum=-8.386;QD=12.88;ReadPosRankSum=-0.149;VQSLOD=3.1212;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:10.75:0,11,208	0/1:11,0:11:84.23:84,0,194	0/0:27,0:15:31.48:0,31,491	0/0:38,0:19:24.71:0,25,508	1/1:3,18:20:5.76:135,6,0	0/0:29,0:29:75.23:0,75,2253	0/0:18,0:18:44.94:0,45,1341	0/1:33,0:26:17.18:17,0,262	0/0:36,0:35:93.78:0,94,3024	0/0:20,0:18:54.17:0,54,1557	0/0:19,0:19:45.14:0,45,1358	1/1:1,27:28:36.12:782,36,0	1/1:1,31:33:51.17:1095,51,0	1/1:1,15:16:18.06:412,18,0	0/0:25,0:25:60.19:0,60,1956	0/0:27,0:27:9.88:0,10,393	0/0:44,0:44:99:0,105,2921	0/1:30,0:30:87.31:87,0,1155	0/0:7,0:5:12.03:0,12,193	0/0:21,0:21:28.83:0,29,406	0/0:20,0:19:6.02:0,6,148	0/0:25,0:25:72.18:0,72,2022	0/0:28,0:28:66.21:0,66,1877	0/0:34,0:33:84.15:0,84,2556	0/0:30,0:30:84.27:0,84,2623	0/1:20,0:20:15.04:15,0,865	0/0:23,0:23:7.39:0,7,266	1/1:4,0:4:6:74,6,0
chr10	101618961	.	AGAGAGACAGG	A	1657.58	PASS	AB=0.981;AC=19;AF=0.339;AN=56;BaseQRankSum=9.543;DP=667;FS=2.645;HRun=0;HaplotypeScore=220.1265;InbreedingCoeff=0.2560;MQ=63.56;MQ0=11;MQRankSum=-5.734;QD=5.82;ReadPosRankSum=-2.750;VQSLOD=2.3708;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:13.68:14,0,143	0/1:8,1:9:99:99,0,199	0/0:46,0:27:55.98:0,56,700	0/0:46,0:25:12.53:0,13,529	1/1:19,0:18:5.34:24,5,0	0/0:26,0:26:60.21:0,60,2104	0/0:15,0:15:39.55:0,40,1411	1/1:4,21:21:50.98:636,51,0	0/0:34,0:33:93.19:0,93,3588	0/0:17,0:16:39.13:0,39,1478	0/0:17,0:17:28.14:0,28,1148	1/1:30,0:30:38.86:233,39,0	1/1:37,0:37:52.57:271,53,0	1/1:17,0:17:21.56:99,22,0	0/0:22,0:22:57.18:0,57,2212	0/1:25,2:27:80.04:80,0,385	0/0:38,0:38:90.20:0,90,3058	0/1:29,0:29:57.76:58,0,713	0/1:7,0:5:84.89:85,0,90	0/1:17,0:17:11.58:12,0,407	0/1:12,0:12:17.24:17,0,186	0/0:25,0:25:64.38:0,64,2118	0/0:25,0:25:57.09:0,57,1638	0/0:35,0:35:78.66:0,79,3043	0/0:30,0:30:84.16:0,84,3138	0/1:18,0:18:71.33:71,0,1071	0/1:22,0:22:99:143,0,384	0/0:5,0:5:0:0,0,0
chr10	101618996	.	GAAGA	G	376.06	PASS	AB=1.000;AC=13;AF=0.250;AN=52;BaseQRankSum=2.738;DP=605;FS=3.931;HRun=0;HaplotypeScore=167.0203;InbreedingCoeff=0.3578;MQ=60.47;MQ0=18;MQRankSum=-3.615;QD=2.46;ReadPosRankSum=-1.577;VQSLOD=2.5987;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:5.76:0,6,36	1/1:5,0:5:3:26,3,0	./.	./.	0/1:19,0:18:13.85:14,0,16	1/1:11,9:20:6.02:92,6,0	1/1:15,0:14:17.95:170,18,0	0/0:27,0:24:9.37:0,9,61	0/0:32,0:31:16.15:0,16,183	0/0:17,0:17:30.06:0,30,612	0/0:13,0:13:27.08:0,27,533	0/0:28,0:28:6.65:0,7,31	0/1:27,0:25:2.49:2,0,25	0/0:13,0:12:4.51:0,5,23	1/1:5,10:15:12.04:184,12,0	0/1:17,0:17:17.70:18,0,23	0/0:28,0:28:44.60:0,45,781	0/0:19,0:18:11.91:0,12,90	0/1:14,0:13:2.42:2,0,172	0/0:19,0:19:6:0,6,224	0/0:5,0:5:8.52:0,9,97	0/1:21,0:21:16.09:16,0,405	0/0:17,0:15:27.06:0,27,482	0/0:31,0:30:51.61:0,52,894	0/0:30,0:29:36.10:0,36,671	0/0:26,0:26:49.52:0,50,648	0/0:25,0:25:8.36:0,8,624	0/0:8,0:7:4.83:0,5,54
chr10	101619032	.	AAAGAAAGAAAGAAAGG	A	1833.83	PASS	AB=0.994;AC=12;AF=0.231;AN=52;BaseQRankSum=10.081;DP=614;FS=5.710;HRun=0;HaplotypeScore=323.8778;InbreedingCoeff=0.1620;MQ=46.74;MQ0=26;MQRankSum=-9.483;QD=11.68;ReadPosRankSum=0.331;VQSLOD=1.6121;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,1:17:43.46:218,0,43	1/1:8,1:8:20.46:322,20,0	./.	./.	0/1:14,0:13:9.15:244,0,9	0/0:21,0:21:42.05:0,42,909	0/0:30,0:24:70.29:0,70,1052	0/0:49,0:34:53.88:0,54,728	0/0:30,0:29:45.34:0,45,1054	0/0:25,0:25:75.22:0,75,2943	0/0:17,0:17:45.12:0,45,1711	0/1:25,0:25:82.52:332,0,83	0/1:21,0:19:68.41:94,0,68	0/1:19,0:18:11.44:234,0,11	0/0:21,0:21:45.06:0,45,931	1/1:14,2:16:24.63:498,25,0	0/0:31,0:31:86.09:0,86,2658	0/1:18,0:16:30.90:31,0,114	0/0:29,0:22:4.12:0,4,911	0/0:25,0:25:39.88:0,40,1104	0/1:7,0:7:4.35:4,0,215	0/0:30,0:30:84.13:0,84,2192	0/0:22,0:21:60.14:0,60,1906	0/0:34,0:33:93.84:0,94,3061	0/0:22,0:21:63.13:0,63,2482	0/0:34,0:34:48.38:0,48,2358	0/0:34,0:34:34.30:0,34,2679	0/1:9,0:9:11.81:12,0,264
chr10	101619041	.	A	AAGAG	2458.68	PASS	AB=0.921;AC=12;AF=0.231;AN=52;BaseQRankSum=3.030;DP=628;FS=7.332;HRun=0;HaplotypeScore=197.0593;InbreedingCoeff=-0.2849;MQ=46.52;MQ0=22;MQRankSum=-7.620;QD=8.45;ReadPosRankSum=1.071;VQSLOD=2.3557;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:16:25.68:0,26,160	0/0:8,0:7:20.80:0,21,144	./.	./.	0/1:14,0:13:47.98:68,0,48	0/0:24,0:24:45.03:0,45,421	0/0:35,0:29:69.37:0,69,651	0/1:55,0:42:99:331,0,184	0/1:26,0:25:5.69:6,0,300	0/0:33,0:33:99:0,99,1156	0/0:17,0:17:13.70:0,14,564	0/1:24,0:24:64.38:64,0,159	0/0:21,0:19:6.92:0,7,143	0/1:19,0:18:27.66:28,0,121	0/0:21,0:21:42.06:0,42,420	0/0:18,0:18:33.01:0,33,237	0/0:29,0:29:83.99:0,84,1048	0/1:15,0:13:20.16:20,0,91	0/1:13,18:26:52.13:543,0,52	0/1:22,0:22:91.29:91,0,159	0/1:7,0:7:21.74:112,0,22	0/0:30,0:30:81.06:0,81,956	0/0:23,0:22:66.11:0,66,829	0/0:35,0:34:98.95:0,99,1263	0/0:24,0:23:66.15:0,66,904	0/1:29,5:34:47.27:1094,0,47	0/1:33,0:33:95.68:96,0,331	0/1:2,8:9:10.87:152,0,11
chr10	101619056	.	GAAGAAAGAAGGAAAGAAAGAAAGAAAGA	G	6841.48	PASS	AB=0.945;AC=17;AF=0.327;AN=52;BaseQRankSum=12.661;DP=616;FS=6.409;HRun=0;HaplotypeScore=477.6539;InbreedingCoeff=0.0148;MQ=47.03;MQ0=17;MQRankSum=-9.215;QD=23.19;ReadPosRankSum=-5.563;VQSLOD=1.0431;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:14:99:111,0,228	0/1:12,0:11:73.57:74,0,300	./.	./.	0/1:13,0:12:56.61:273,0,57	0/0:26,0:26:60.21:0,60,3571	0/0:36,0:30:82.22:0,82,4036	0/1:33,20:42:99:619,0,862	0/0:25,0:24:21.42:0,21,2642	0/0:34,0:34:99:0,102,6257	0/0:18,0:18:5.79:0,6,2141	1/1:26,0:26:49.29:790,49,0	1/1:16,0:15:12.90:392,13,0	1/1:17,0:16:17.35:295,17,0	0/0:24,0:24:57.20:0,57,3205	0/1:16,0:16:99:125,0,328	0/0:31,0:31:28.24:0,28,3947	0/0:8,0:6:11.96:0,12,162	0/1:21,0:20:99:501,0,660	0/1:19,0:19:99:788,0,445	0/1:8,0:8:99:400,0,140	0/0:32,0:32:90.22:0,90,4971	0/0:25,0:24:69.24:0,69,3886	0/0:33,0:32:84.48:0,84,3805	0/0:26,0:25:75.24:0,75,3960	0/1:18,17:35:99:1008,0,608	0/1:35,0:35:99:1337,0,1024	0/1:8,0:7:75.34:129,0,75
chr10	101619082	.	A	AG	360.41	PASS	AB=0.929;AC=8;AF=0.143;AN=56;BaseQRankSum=8.714;DP=626;FS=0.000;HRun=1;HaplotypeScore=156.0818;InbreedingCoeff=0.0027;MQ=48.69;MQ0=11;MQRankSum=-6.218;QD=2.98;ReadPosRankSum=5.450;VQSLOD=-0.1479;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:12:35.25:70,0,35	0/1:11,4:14:28.69:63,0,29	0/0:12,0:2:3.01:0,3,39	0/0:7,0:3:8.06:0,8,84	0/1:14,1:15:49.81:51,0,50	0/0:28,0:28:75.22:0,75,947	0/0:32,0:30:87.27:0,87,1114	0/0:30,0:28:41.75:0,42,339	0/0:27,0:27:65.91:0,66,790	0/0:38,0:38:99:0,114,1468	0/0:14,0:14:42.14:0,42,545	1/1:20,0:20:1.74:163,2,0	0/1:20,0:20:56.27:56,0,61	0/1:18,1:18:5.62:6,0,25	0/0:27,0:27:72.22:0,72,919	0/1:16,2:18:47.49:79,0,47	0/0:32,0:31:90.21:0,90,1144	0/0:9,0:7:15.05:0,15,194	0/0:18,0:16:36.47:0,36,310	0/0:24,0:24:66.12:0,66,480	0/0:4,0:5:11.76:0,12,104	0/0:38,0:38:99:0,108,1384	0/0:27,0:27:81.26:0,81,1050	0/0:39,0:39:99:0,102,1267	0/0:28,0:28:84.10:0,84,1065	0/0:32,0:32:72.52:0,73,611	0/0:35,0:35:81.84:0,82,645	0/0:3,0:3:5.93:0,6,49
chr10	101619084	.	A	AAGG	3445.93	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=13.359;DP=636;FS=0.355;HRun=0;HaplotypeScore=172.2977;InbreedingCoeff=0.3773;MQ=48.87;MQ0=13;MQRankSum=-6.785;QD=12.76;ReadPosRankSum=-0.002;VQSLOD=3.1157;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:13:18.72:233,0,19	1/1:12,4:15:18.96:341,19,0	0/0:12,0:2:3.48:0,3,53	0/0:9,0:3:7.27:0,7,107	1/1:15,1:16:41.70:371,42,0	0/0:28,0:28:75.25:0,75,1290	0/0:33,0:31:93.29:0,93,1567	0/1:31,0:29:60.67:98,0,61	0/0:28,0:28:66.21:0,66,1110	0/0:39,0:39:99:0,111,1911	0/0:14,0:14:42.14:0,42,738	1/1:20,0:20:47.79:664,48,0	1/1:21,0:21:34.21:436,34,0	1/1:18,1:18:38.49:347,38,0	0/0:27,0:27:72.23:0,72,1237	1/1:16,2:18:15.85:353,16,0	0/0:33,0:32:72.38:0,72,1499	0/0:10,0:8:15.05:0,15,261	0/1:18,0:16:62.50:144,0,62	0/1:25,0:25:99:154,0,124	0/1:5,0:5:30.05:57,0,30	0/0:37,0:37:99:0,108,1845	0/0:27,0:27:81.28:0,81,1424	0/0:37,0:37:95.31:0,95,1660	0/0:28,0:28:84.29:0,84,1469	0/1:31,0:31:99:107,0,217	0/1:35,0:35:99:140,0,145	0/0:4,0:4:0.21:0,0,16
chr10	101619114	.	AGAAG	A	164.62	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.650;DP=612;FS=0.000;HRun=0;HaplotypeScore=163.5990;InbreedingCoeff=0.7626;MQ=50.30;MQ0=6;MQRankSum=-3.574;QD=13.72;ReadPosRankSum=-1.210;VQSLOD=2.9612;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:31.25:0,31,436	0/0:12,0:12:24.53:0,25,307	0/0:15,0:3:5.91:0,6,40	0/0:10,0:4:2.37:0,2,8	0/0:22,0:22:63.01:0,63,1345	0/0:28,0:28:66.15:0,66,1317	0/0:20,0:20:35.55:0,36,575	0/0:35,0:30:65.84:0,66,768	0/0:26,0:26:54.05:0,54,1060	0/0:26,0:26:72.14:0,72,1244	0/0:16,0:16:42.12:0,42,917	0/0:26,0:26:65.87:0,66,1251	0/0:27,0:27:66.07:0,66,1470	0/0:19,0:19:33:0,33,613	0/0:24,0:24:63.16:0,63,1342	0/0:20,0:20:41.99:0,42,677	0/0:30,0:30:66.11:0,66,1398	1/1:2,10:12:15.05:253,15,0	0/0:21,0:19:36.04:0,36,790	0/0:27,0:27:57.05:0,57,1191	0/0:7,0:7:20.94:0,21,321	0/0:28,0:28:66.17:0,66,1355	0/0:24,0:24:54.02:0,54,863	0/0:31,0:31:43.13:0,43,1327	0/0:28,0:28:75.16:0,75,1435	0/0:22,0:22:44.49:0,44,965	0/0:33,0:32:80.95:0,81,1516	0/0:7,0:6:15:0,15,314
chr10	101619130	.	G	GGAAA	1485.49	PASS	AB=0.741;AC=5;AF=0.089;AN=56;BaseQRankSum=2.999;DP=625;FS=2.137;HRun=0;HaplotypeScore=140.0879;InbreedingCoeff=0.7325;MQ=52.12;MQ0=11;MQRankSum=-3.908;QD=27.51;ReadPosRankSum=-1.106;VQSLOD=3.5000;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,7:20:41.87:603,42,0	1/1:9,5:14:26.92:450,27,0	0/0:21,0:6:14.83:0,15,132	0/0:12,0:4:5.05:0,5,45	0/0:29,0:29:73.41:0,73,1054	0/0:25,0:25:57.13:0,57,829	0/0:21,0:21:47.96:0,48,592	0/0:38,0:32:45.08:0,45,558	0/0:24,0:24:57.15:0,57,865	0/0:28,0:28:51.11:0,51,735	0/0:15,0:15:42.11:0,42,651	0/0:26,0:26:63.01:0,63,859	0/0:28,0:28:66.16:0,66,1044	0/0:16,0:16:45.02:0,45,601	0/0:22,0:22:57.17:0,57,885	0/1:13,7:20:59.21:562,0,59	0/0:28,0:28:69.03:0,69,953	0/0:19,0:19:35.86:0,36,323	0/0:17,0:14:36.05:0,36,552	0/0:23,0:23:57.10:0,57,808	0/0:11,0:11:30:0,30,348	0/0:27,0:27:63.13:0,63,889	0/0:25,0:25:50.81:0,51,635	0/0:27,0:27:38.24:0,38,907	0/0:30,0:30:75.13:0,75,1042	0/0:18,0:18:47.79:0,48,743	0/0:31,0:30:78.15:0,78,1149	0/0:10,0:9:23.97:0,24,289
chr10	101619688	.	GAATTAA	G	261.63	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=3.919;DP=539;FS=0.000;HRun=0;HaplotypeScore=128.8906;InbreedingCoeff=0.6584;MQ=78.16;MQ0=1;MQRankSum=-2.774;QD=9.34;ReadPosRankSum=-0.121;VQSLOD=2.5384;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,2235	0/0:4,0:4:12.04:0,12,249	0/0:17,0:15:39.82:0,40,761	0/1:19,0:16:6.40:6,0,457	0/0:26,0:26:75.25:0,75,2323	0/0:25,0:25:72.25:0,72,2096	0/0:15,0:15:42.13:0,42,1104	0/0:30,0:30:80.47:0,80,1659	0/0:15,0:15:45.14:0,45,1378	0/0:15,0:15:42.14:0,42,1256	0/0:16,0:16:45.14:0,45,1365	0/0:11,0:11:30.10:0,30,964	0/0:20,0:20:57.19:0,57,1724	0/0:16,0:16:47.83:0,48,1435	0/0:20,0:20:54.18:0,54,1592	0/0:21,0:21:60.21:0,60,1347	0/0:30,0:30:90.31:0,90,3025	1/1:2,7:9:18.02:351,18,0	0/0:24,0:24:63.19:0,63,1350	0/0:29,0:29:84.29:0,84,1793	0/0:8,0:8:15.05:0,15,299	0/0:28,0:28:78.26:0,78,2339	0/0:14,0:14:39.13:0,39,1094	0/0:24,0:24:69.22:0,69,2242	0/0:7,0:7:18.06:0,18,528	0/0:28,0:28:81.28:0,81,1684	0/0:22,0:21:57.03:0,57,1122	0/0:8,0:8:21.07:0,21,426
chr10	101619692	.	TA	T	2902.38	PASS	AB=0.744;AC=22;AF=0.393;AN=56;BaseQRankSum=8.211;DP=567;FS=7.303;HRun=12;HaplotypeScore=72.8901;InbreedingCoeff=0.8079;MQ=80.95;MQ0=1;MQRankSum=0.512;QD=11.94;ReadPosRankSum=2.346;VQSLOD=3.3650;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,31:39:90.63:684,91,0	1/1:2,2:4:5.97:46,6,0	0/0:18,1:17:6.53:0,7,193	0/0:21,0:18:6.78:0,7,146	0/0:24,0:28:71.85:0,72,676	0/0:27,0:30:62.77:0,63,592	0/0:14,0:14:24.05:0,24,244	0/1:8,19:28:0.64:319,0,1	0/0:14,1:15:18.83:0,19,365	0/0:12,0:13:32.90:0,33,319	0/0:21,0:21:48.05:0,48,460	0/0:9,0:10:29.89:0,30,283	0/0:22,1:23:30.86:0,31,466	0/0:16,1:17:21.43:0,21,377	0/0:21,0:21:33.80:0,34,426	1/1:2,20:22:53.40:418,53,0	0/0:31,0:31:90.17:0,90,905	1/1:7,0:7:7.12:22,7,0	1/1:7,16:24:22.30:339,22,0	1/1:9,22:31:34.84:440,35,0	1/1:2,6:8:8.96:70,9,0	0/0:23,0:28:62.68:0,63,574	0/1:17,2:19:10.88:11,0,250	0/0:24,0:24:60.12:0,60,609	0/0:9,0:9:8.43:0,8,191	1/1:12,20:32:18.95:391,19,0	1/1:4,17:21:38.84:302,39,0	1/1:4,4:8:8.95:70,9,0
chr10	101619984	.	GGAGAGAGAGAGAGAGAGA	G	1638.52	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=6.474;DP=506;FS=14.136;HRun=0;HaplotypeScore=208.3782;InbreedingCoeff=0.8058;MQ=70.93;MQ0=10;MQRankSum=-3.819;QD=18.41;ReadPosRankSum=-0.310;VQSLOD=1.3481;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:33.11:0,33,2056	0/0:4,0:4:6.01:0,6,69	./.	0/0:30,0:16:3.01:0,3,41	1/1:14,7:20:12:326,12,0	0/0:19,0:19:18.06:0,18,755	0/0:17,0:16:24.08:0,24,1330	0/0:25,0:25:19.88:0,20,248	0/0:14,0:14:12.04:0,12,739	0/0:14,0:14:21.07:0,21,1156	0/0:9,0:8:6.02:0,6,262	1/1:12,4:16:12.04:574,12,0	1/1:11,8:20:17.89:678,18,0	1/1:16,1:17:7.82:174,8,0	0/0:19,0:20:33.11:0,33,2054	0/0:11,0:14:9.03:0,9,551	0/0:11,0:11:18.06:0,18,1224	1/1:15,0:15:3:40,3,0	0/0:17,0:18:20.66:0,21,982	0/0:18,0:18:24.08:0,24,1320	0/0:13,0:18:19.60:0,20,1029	0/0:18,0:19:27.08:0,27,1189	0/0:20,0:20:24.08:0,24,1337	0/0:21,0:21:33:0,33,2356	0/0:21,0:21:39.11:0,39,1856	0/0:16,0:15:15.51:0,16,804	0/0:22,0:22:35.15:0,35,2097	0/0:14,0:12:21.07:0,21,1342
chr10	101620955	.	CA	C	3008.94	PASS	AB=0.760;AC=28;AF=0.500;AN=56;BaseQRankSum=13.638;DP=521;FS=2.491;HRun=11;HaplotypeScore=62.5302;InbreedingCoeff=0.8339;MQ=66.06;MQ0=0;MQRankSum=0.520;QD=10.30;ReadPosRankSum=1.932;VQSLOD=2.9388;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:28:51.75:153,52,0	1/1:1,0:10:16.30:47,16,0	0/0:4,0:4:9.81:0,10,64	0/0:9,0:9:5.36:0,5,78	1/1:3,1:18:26.28:91,26,0	0/0:20,0:20:51.08:0,51,530	0/0:12,0:13:36.05:0,36,363	1/1:2,22:24:65.91:542,66,0	0/0:13,0:14:29.94:0,30,303	0/0:21,0:21:48.12:0,48,511	0/0:31,0:31:81.20:0,81,863	1/1:0,0:11:18.33:53,18,0	1/1:2,0:17:26.48:77,26,0	1/1:0,0:18:36.67:106,37,0	0/0:20,1:22:29.29:0,29,485	1/1:3,0:21:36.66:106,37,0	0/1:21,3:24:4.76:5,0,571	0/0:9,0:10:29.89:0,30,293	1/1:3,17:20:50.93:419,51,0	1/1:5,26:31:49.82:555,50,0	1/1:2,2:4:5.99:49,6,0	0/0:19,0:19:51.13:0,51,544	0/0:22,0:23:53.90:0,54,521	0/0:14,1:16:20.30:0,20,395	0/0:27,0:27:69.15:0,69,716	1/1:4,16:20:47.81:385,48,0	1/1:8,26:34:65.90:542,66,0	0/1:5,7:12:42.66:102,0,43
chr10	101621347	.	GTTGTTGTTGTTGT	G	3527.70	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=6.166;DP=726;FS=0.568;HRun=0;HaplotypeScore=243.4591;InbreedingCoeff=0.8535;MQ=54.02;MQ0=26;MQRankSum=-2.951;QD=28.45;ReadPosRankSum=1.218;VQSLOD=2.3074;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:22:58.28:58,0,1030	0/0:5,0:5:11.99:0,12,314	0/0:45,0:17:44.73:0,45,1412	0/0:52,0:15:38.48:0,38,1000	1/1:4,15:19:32.69:475,33,0	0/0:19,0:19:18.84:0,19,2554	0/0:28,0:28:80.08:0,80,3301	0/0:29,0:29:84.10:0,84,1648	0/0:24,0:24:72.25:0,72,3867	0/0:27,0:27:75.25:0,75,3256	0/0:20,0:20:57.18:0,57,2585	1/1:4,32:36:32.77:1255,33,0	1/1:2,23:25:30.10:1115,30,0	1/1:3,19:22:17.93:624,18,0	0/0:32,0:32:96.33:0,96,4758	0/0:21,0:21:50.06:0,50,1766	0/0:31,0:31:87.30:0,87,4485	0/0:21,0:19:39.96:0,40,1710	0/0:23,0:23:65.97:0,66,804	0/0:28,0:28:50.88:0,51,562	0/0:42,0:39:33.06:0,33,662	0/0:26,0:26:72.24:0,72,3040	0/0:7,0:7:21.07:0,21,843	0/0:40,0:40:99:0,116,5998	0/0:13,0:13:39.13:0,39,1809	0/0:27,0:27:77.97:0,78,1244	0/0:30,0:30:39.77:0,40,633	0/0:12,0:12:18.04:0,18,273
chr10	101621354	.	TTGTTGTTG	T	4772.61	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=10.298;DP=724;FS=8.516;HRun=0;HaplotypeScore=175.1546;InbreedingCoeff=0.8737;MQ=53.01;MQ0=36;MQRankSum=-3.147;QD=21.31;ReadPosRankSum=1.151;VQSLOD=3.3399;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:24.96:0,25,482	0/1:6,0:6:13.31:13,0,113	0/0:56,0:15:27.55:0,28,389	0/0:57,0:9:16.35:0,16,279	0/0:16,0:16:25.44:0,25,99	0/0:21,0:21:62.79:0,63,1507	0/0:29,0:29:78.41:0,78,1751	1/1:27,0:26:57.10:733,57,0	0/0:27,0:27:78.26:0,78,2295	0/0:24,0:24:69.19:0,69,1670	0/0:19,0:19:48.16:0,48,1504	1/1:33,0:33:30.97:347,31,0	1/1:23,0:23:27.05:337,27,0	1/1:20,0:20:15.93:200,16,0	0/0:31,0:31:90.21:0,90,2627	0/0:23,0:23:35.32:0,35,597	0/0:30,0:30:75.26:0,75,2430	0/0:20,0:18:40.48:0,40,710	1/1:2,18:20:50.97:935,51,0	1/1:5,26:31:41.94:642,42,0	0/0:12,30:40:6.43:0,6,18	0/0:26,0:26:69.14:0,69,1532	0/0:6,0:6:15.04:0,15,377	0/0:39,0:39:99:0,104,3671	0/0:11,0:11:30.08:0,30,682	1/1:5,20:26:57.16:1022,57,0	1/1:3,25:28:17.41:458,17,0	1/1:2,8:10:3.01:85,3,0
chr10	101621356	.	GT	G	655.91	PASS	AB=0.968;AC=18;AF=0.321;AN=56;BaseQRankSum=12.485;DP=718;FS=2.597;HRun=2;HaplotypeScore=115.3235;InbreedingCoeff=0.6219;MQ=52.90;MQ0=38;MQRankSum=-4.715;QD=2.90;ReadPosRankSum=4.251;VQSLOD=0.3118;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:23.77:0,24,130	1/1:3,3:6:16.30:102,16,0	0/0:57,0:12:22.20:0,22,305	0/0:59,1:8:19.20:0,19,220	1/1:16,0:16:11.62:27,12,0	0/0:22,0:22:65.57:0,66,892	0/0:31,0:31:71.57:0,72,1083	0/1:23,0:26:30.43:30,0,303	0/0:27,0:27:78.25:0,78,1121	0/0:26,0:26:75.24:0,75,1069	0/0:18,0:18:51.17:0,51,742	1/1:33,0:33:16.41:52,16,0	1/1:23,0:23:20.74:69,21,0	1/1:20,0:20:11.72:37,12,0	0/0:31,0:31:90.23:0,90,1274	1/1:13,10:25:17.23:412,17,0	0/0:29,0:29:78.26:0,78,1128	0/0:19,0:17:31.29:0,31,159	0/1:19,0:19:31.87:32,0,206	0/0:30,0:30:22.76:0,23,229	0/0:37,1:36:7.93:0,8,35	0/0:24,0:24:69.17:0,69,949	0/0:7,0:7:18.03:0,18,220	0/0:41,0:41:99:0,113,1585	0/0:11,0:11:33.08:0,33,437	0/1:23,0:23:51.37:51,0,169	0/1:26,0:26:7.77:28,0,8	1/1:8,0:8:2.50:9,2,0
chr10	101621359	.	GT	G	2189.22	PASS	AB=0.993;AC=26;AF=0.464;AN=56;BaseQRankSum=11.843;DP=723;FS=0.000;HRun=2;HaplotypeScore=108.4443;InbreedingCoeff=0.6004;MQ=51.82;MQ0=42;MQRankSum=-3.231;QD=5.47;ReadPosRankSum=4.567;VQSLOD=0.7013;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,15:21:26.73:355,27,0	1/1:3,3:6:16.68:106,17,0	0/0:59,0:10:27.07:0,27,310	0/1:66,3:9:21.35:21,0,155	1/1:16,1:17:30.10:380,30,0	0/0:21,1:22:21.76:0,22,648	0/1:30,0:30:0.77:1,0,847	0/1:26,0:25:26.94:27,0,65	0/0:25,0:25:75.19:0,75,992	0/0:25,0:25:72.21:0,72,914	0/0:19,0:19:53.82:0,54,688	1/1:32,1:33:28.94:258,29,0	1/1:23,0:23:24.83:158,25,0	1/1:21,0:21:17.62:107,18,0	0/0:31,0:31:91.53:0,92,1220	1/1:18,10:28:18.28:425,18,0	0/0:29,0:29:77.22:0,77,997	1/1:2,14:14:20.22:446,20,0	0/1:19,0:19:12.49:39,0,12	0/0:30,0:29:9.68:0,10,43	0/1:37,0:35:0.39:0,0,1	0/0:23,0:23:60.44:0,60,736	0/0:6,0:6:15.05:0,15,196	0/0:42,0:42:99:0,107,1496	0/0:11,0:11:32.12:0,32,385	0/1:21,0:21:16.28:31,0,16	1/1:25,0:25:7.63:30,8,0	1/1:8,0:8:2.22:7,2,0
chr10	101621360	.	TTG	T	2101.50	PASS	AB=0.923;AC=13;AF=0.232;AN=56;BaseQRankSum=6.165;DP=733;FS=12.533;HRun=0;HaplotypeScore=118.8141;InbreedingCoeff=0.7810;MQ=51.57;MQ0=42;MQRankSum=2.283;QD=15.01;ReadPosRankSum=-2.499;VQSLOD=2.4680;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:23.27:0,23,105	0/0:3,0:6:11.76:0,12,75	0/0:62,0:9:18.05:0,18,216	0/0:71,0:9:10.33:0,10,87	0/0:17,0:17:28.15:0,28,133	0/0:22,0:22:50.75:0,51,693	0/0:31,0:31:62.99:0,63,822	1/1:6,19:24:54.15:639,54,0	0/0:25,0:25:57.17:0,57,824	0/0:26,0:26:47.95:0,48,645	0/0:18,0:19:45.13:0,45,614	0/0:34,0:34:18.05:0,18,83	0/0:23,0:23:6.04:0,6,15	0/0:22,0:22:10.03:0,10,77	0/0:31,0:31:69.20:0,69,974	0/0:14,0:28:37.21:0,37,263	0/0:26,3:29:27.69:0,28,873	0/0:17,0:16:36.61:0,37,183	1/1:19,0:19:45.04:471,45,0	1/1:30,0:29:45.03:477,45,0	0/0:37,0:35:2.22:0,2,8	0/0:22,1:23:8.74:0,9,556	0/0:6,0:6:18.06:0,18,250	0/0:41,0:41:96.32:0,96,1477	0/1:11,1:12:18.21:18,0,185	1/1:21,0:21:50.83:506,51,0	1/1:25,0:25:17.81:149,18,0	1/1:8,0:8:2.98:22,3,0
chr10	101621681	.	TAC	T	5810.96	PASS	AB=0.800;AC=15;AF=0.268;AN=56;BaseQRankSum=10.423;DP=843;FS=4.004;HRun=0;HaplotypeScore=116.8023;InbreedingCoeff=0.9019;MQ=58.17;MQ0=6;MQRankSum=-0.034;QD=22.52;ReadPosRankSum=1.220;VQSLOD=5.6130;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:87.28:0,87,1385	0/1:3,1:4:30.62:31,0,42	0/0:44,2:23:12.96:0,13,382	0/0:48,0:24:30.05:0,30,435	0/0:19,0:19:39.10:0,39,608	0/0:22,0:22:56.86:0,57,878	0/0:39,1:40:47.91:0,48,1252	1/1:21,31:51:90.28:1099,90,0	0/0:25,1:26:29.54:0,30,961	0/0:24,0:24:45.15:0,45,713	0/0:11,0:11:18.06:0,18,292	0/0:38,0:38:81.28:0,81,1313	0/0:33,0:33:78.25:0,78,1239	0/0:32,0:32:72.18:0,72,1088	0/0:26,2:27:26.52:0,27,872	0/0:23,0:23:57.18:0,57,899	0/0:32,1:33:75.26:0,75,1216	0/0:12,0:25:35.92:0,36,383	1/1:8,8:15:24.03:293,24,0	1/1:8,18:26:45.14:549,45,0	1/1:17,61:80:99:1764,152,0	0/0:22,0:22:48.16:0,48,770	0/0:16,0:16:30.10:0,30,476	0/0:43,0:43:99:0,111,1751	0/0:9,0:9:21.06:0,21,317	1/1:10,31:41:96.29:1159,96,0	1/1:4,15:19:45.14:549,45,0	1/1:9,11:20:30.09:367,30,0
chr10	101621855	.	CGT	C	884.20	PASS	AB=0.933;AC=26;AF=0.500;AN=52;BaseQRankSum=5.241;DP=590;FS=4.170;HRun=0;HaplotypeScore=97.7916;InbreedingCoeff=0.2982;MQ=62.30;MQ0=12;MQRankSum=-3.246;QD=2.50;ReadPosRankSum=0.804;VQSLOD=1.5587;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:33:10.97:55,11,0	1/1:6,0:13:14.20:70,14,0	0/0:12,0:9:0:0,0,0	./.	1/1:17,8:26:11.86:111,12,0	0/0:14,0:20:18.02:0,18,189	0/0:23,0:28:15.01:0,15,149	./.	0/0:13,0:13:9.03:0,9,129	0/0:20,0:20:9.03:0,9,133	0/0:19,0:20:9.03:0,9,132	0/1:14,1:15:31.65:37,0,32	1/1:13,9:22:21.05:227,21,0	0/1:16,2:18:71.66:82,0,72	1/1:17,11:30:26.73:255,27,0	1/1:7,0:12:8.52:42,9,0	0/0:31,1:36:17.37:0,17,429	1/1:2,0:6:2.84:14,3,0	0/1:19,0:18:1.84:2,0,117	0/1:26,1:27:5.27:5,0,282	0/0:22,0:20:15.05:0,15,202	0/1:24,1:27:10.42:10,0,372	0/0:17,0:17:9.01:0,9,112	0/1:23,2:26:31.77:32,0,317	0/1:14,3:17:14.62:15,0,171	1/1:20,0:22:2.84:14,3,0	0/1:20,1:20:17.18:17,0,142	1/1:10,0:16:14.20:70,14,0
chr10	101623582	.	C	CT	1463.68	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-6.177;DP=416;FS=4.017;HRun=6;HaplotypeScore=40.7682;InbreedingCoeff=0.9634;MQ=74.35;MQ0=0;MQRankSum=-0.313;QD=27.62;ReadPosRankSum=1.832;VQSLOD=3.8924;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.16:0,72,734	0/0:3,0:3:9.01:0,9,85	0/0:4,0:4:12.03:0,12,122	0/0:9,0:10:16.14:0,16,164	1/1:3,16:19:48.07:568,48,0	0/0:25,0:25:69.13:0,69,691	0/0:13,0:13:39.07:0,39,391	0/0:40,0:40:96.21:0,96,980	0/0:13,0:13:39.06:0,39,385	0/0:13,0:13:36.08:0,36,367	0/0:15,0:15:39.08:0,39,398	1/1:1,6:7:18.06:226,18,0	1/1:1,10:11:24.08:302,24,0	1/1:1,15:16:42.13:526,42,0	0/0:15,0:15:33.06:0,33,336	0/0:13,0:13:39.09:0,39,398	0/0:25,0:25:66.12:0,66,665	0/0:7,0:7:18.04:0,18,183	0/0:19,0:19:50.90:0,51,520	0/0:16,0:16:36.07:0,36,367	0/0:12,0:12:33.07:0,33,337	0/0:17,0:17:51.10:0,51,514	0/0:16,0:16:42.09:0,42,428	0/0:10,0:10:27.06:0,27,275	0/0:9,0:9:21.04:0,21,214	0/0:21,0:21:51.11:0,51,520	0/0:13,0:13:39.09:0,39,398	0/0:10,0:10:18.01:0,18,174
chr10	101623683	.	CT	C	2406.83	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=2.165;DP=322;FS=0.000;HRun=8;HaplotypeScore=41.1177;InbreedingCoeff=0.7635;MQ=78.37;MQ0=0;MQRankSum=-0.813;QD=20.75;ReadPosRankSum=-1.942;VQSLOD=2.4689;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:35.71:0,36,210	0/0:6,0:6:5.39:0,5,36	0/0:9,0:9:18.05:0,18,198	0/1:10,0:10:23.83:24,0,107	0/0:16,0:16:48.09:0,48,541	0/0:18,0:18:45.13:0,45,532	0/0:7,0:7:21.06:0,21,253	1/1:3,27:30:81.11:776,81,0	0/0:12,0:12:36.10:0,36,425	0/0:13,0:13:36.10:0,36,427	0/0:11,0:11:33.10:0,33,398	0/0:4,0:4:12.04:0,12,144	0/0:9,0:9:21.04:0,21,239	0/0:12,0:13:29.77:0,30,305	0/0:12,0:12:33.09:0,33,387	0/1:5,0:5:13.32:13,0,34	0/0:13,0:13:33.10:0,33,399	0/0:11,0:11:12.38:0,12,145	1/1:2,15:17:45.07:434,45,0	1/1:0,15:15:39.06:377,39,0	1/1:3,2:5:12.02:116,12,0	0/0:10,0:10:30.09:0,30,362	0/0:12,0:12:33.09:0,33,387	0/0:5,0:5:9.03:0,9,109	0/0:11,0:11:30.09:0,30,362	1/1:2,13:15:5.83:340,6,0	1/1:0,13:13:36.06:347,36,0	1/1:0,6:6:18.03:174,18,0
chr10	101623715	.	CATTT	C	308.20	PASS	AC=6;AF=0.136;AN=44;BaseQRankSum=4.049;DP=253;FS=3.026;HRun=0;HaplotypeScore=50.8158;InbreedingCoeff=0.5497;MQ=64.29;MQ0=3;MQRankSum=-2.314;QD=12.84;ReadPosRankSum=0.174;VQSLOD=2.7968;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:6.02:0,6,142	0/0:4,0:4:6.02:0,6,142	./.	./.	1/1:7,6:13:15.05:236,15,0	0/0:18,0:18:33.10:0,33,737	./.	0/0:24,0:24:18.06:0,18,426	0/0:7,0:7:6.02:0,6,123	0/0:7,0:7:9.03:0,9,214	0/0:12,0:12:15.05:0,15,356	./.	1/1:2,2:4:3.01:47,3,0	1/1:4,3:7:9.03:141,9,0	0/0:7,0:7:3.01:0,3,71	0/0:2,0:2:6.02:0,6,142	0/0:15,0:15:18.06:0,18,427	0/0:12,0:12:15.05:0,15,355	0/0:13,0:13:15.05:0,15,356	0/0:9,0:9:3.01:0,3,71	0/0:1,0:2:3.01:0,3,52	0/0:8,0:8:6.02:0,6,142	0/0:10,0:10:6.02:0,6,142	./.	0/0:12,0:12:21.07:0,21,498	0/0:14,0:14:18.05:0,18,364	0/0:17,0:17:18.06:0,18,427	./.
chr10	101623975	.	TTGTGTGTGTG	T	1836.30	PASS	AB=0.818;AC=13;AF=0.232;AN=56;BaseQRankSum=2.297;DP=470;FS=3.081;HRun=0;HaplotypeScore=148.6838;InbreedingCoeff=0.7685;MQ=61.14;MQ0=15;MQRankSum=-3.733;QD=20.63;ReadPosRankSum=0.683;VQSLOD=2.4021;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:29:48.16:0,48,1829	0/0:3,0:9:12.04:0,12,511	0/0:26,0:14:6.91:0,7,92	0/0:18,0:11:6.01:0,6,58	0/0:6,0:21:27.09:0,27,519	0/0:22,0:23:36.12:0,36,1531	0/0:14,0:14:21.07:0,21,783	1/1:14,7:20:17.99:210,18,0	0/0:19,0:21:45.14:0,45,1611	0/0:16,0:18:42.06:0,42,1595	0/0:17,0:17:42.13:0,42,1559	0/0:12,0:21:33.11:0,33,536	0/0:3,0:9:20.62:0,21,271	0/0:3,0:7:9.03:0,9,173	0/0:24,0:27:60.68:0,61,2671	0/0:10,0:21:42.14:0,42,1799	0/0:20,0:22:45.07:0,45,1442	0/0:14,0:27:54.18:0,54,1513	0/1:7,2:9:35.80:84,0,36	1/1:2,8:11:21.07:550,21,0	1/1:9,6:15:3:90,3,0	0/0:10,0:11:27.09:0,27,1107	0/0:10,0:10:18.06:0,18,760	0/0:16,0:17:33.07:0,33,1291	0/0:8,0:10:24.08:0,24,781	1/1:7,6:12:18.03:406,18,0	1/1:4,8:12:21.07:580,21,0	1/1:6,2:8:3.01:90,3,0
chr10	101625260	.	GA	G	1491.01	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.587;DP=653;FS=5.274;HRun=10;HaplotypeScore=61.9181;InbreedingCoeff=0.9870;MQ=74.95;MQ0=0;MQRankSum=-0.773;QD=18.18;ReadPosRankSum=1.282;VQSLOD=4.3755;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:31:68.98:599,69,0	1/1:3,11:14:29.91:252,30,0	0/0:13,0:13:23.06:0,23,279	0/0:14,0:13:11.01:0,11,99	0/0:35,0:35:90.10:0,90,971	0/0:24,0:24:66.18:0,66,730	0/0:18,0:18:48.13:0,48,531	0/0:23,0:23:51.11:0,51,547	0/0:26,0:26:72.63:0,73,772	0/0:35,0:35:80.24:0,80,863	0/0:19,0:19:51.13:0,51,556	0/0:21,0:22:57.01:0,57,604	0/0:27,0:27:72.13:0,72,760	0/0:14,0:14:39.11:0,39,431	0/0:24,0:24:66.17:0,66,724	1/1:3,17:20:20.81:410,21,0	0/0:33,0:33:90.20:0,90,970	1/1:1,16:17:44.99:391,45,0	0/0:24,0:25:56.99:0,57,612	0/0:26,0:26:69.18:0,69,756	0/0:22,0:22:59.93:0,60,634	0/0:27,0:27:63.16:0,63,690	0/0:30,0:30:81.69:0,82,895	0/0:27,0:27:78.16:0,78,841	0/0:24,0:24:60.14:0,60,648	0/0:24,0:24:66.18:0,66,730	0/0:27,1:28:49.13:0,49,760	0/0:11,0:11:27.07:0,27,295
chr10	101626648	.	TA	T	1787.11	PASS	AB=0.834;AC=26;AF=0.464;AN=56;BaseQRankSum=4.073;DP=464;FS=9.805;HRun=13;HaplotypeScore=63.3626;InbreedingCoeff=0.4252;MQ=71.99;MQ0=0;MQRankSum=0.407;QD=6.16;ReadPosRankSum=1.102;VQSLOD=1.4378;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:25:32.55:96,33,0	1/1:0,0:6:10.19:30,10,0	0/1:14,1:12:12.18:12,0,82	0/1:15,2:12:41.46:41,0,64	0/0:16,2:21:4.67:0,5,110	0/0:23,2:28:19.60:0,20,451	0/0:12,1:15:17:0,17,173	1/1:14,20:36:71.59:499,72,0	0/0:18,1:19:17.15:0,17,328	0/1:17,3:20:38.62:39,0,148	0/1:14,2:18:5.91:6,0,235	0/0:4,0:13:17.21:0,17,100	0/1:5,1:13:4.58:5,0,59	0/0:5,0:15:22.73:0,23,114	0/1:18,4:22:8.72:9,0,393	1/1:2,0:14:22.40:66,22,0	0/0:19,2:21:29.13:0,29,431	1/1:1,0:7:10.18:30,10,0	1/1:4,14:18:9.68:231,10,0	0/1:10,13:24:7.46:233,0,7	1/1:2,9:11:20.85:153,21,0	0/0:12,0:12:14.80:0,15,153	0/0:9,0:9:6.90:0,7,60	0/0:5,0:5:12:0,12,110	0/0:15,0:16:35.85:0,36,325	0/1:7,7:14:5.86:115,0,6	1/1:1,12:14:8.66:217,9,0	1/1:7,9:16:28.81:202,29,0
chr10	101626879	.	AC	A	2289.17	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.701;DP=565;FS=0.000;HRun=5;HaplotypeScore=62.5553;InbreedingCoeff=0.9981;MQ=81.37;MQ0=0;MQRankSum=0.959;QD=29.35;ReadPosRankSum=3.758;VQSLOD=4.0662;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:45:0,45,566	0/0:10,0:10:24.08:0,24,328	0/0:28,0:28:58.92:0,59,709	0/0:26,0:25:44.84:0,45,639	1/1:0,16:16:45.13:509,45,0	0/0:32,0:32:96.23:0,96,1267	0/0:22,0:22:63.20:0,63,844	0/0:34,0:34:99:0,99,1302	0/0:22,0:22:63.20:0,63,836	0/0:21,0:21:63.19:0,63,834	0/0:20,0:20:57.19:0,57,776	1/1:0,20:20:57.07:616,57,0	1/1:1,18:19:51.15:578,51,0	1/1:0,23:23:66.19:747,66,0	0/0:24,0:24:69.20:0,69,910	0/0:16,0:16:48.16:0,48,656	0/0:21,0:21:60.20:0,60,817	0/0:11,0:11:30.10:0,30,410	0/0:16,0:16:42.12:0,42,533	0/0:22,0:22:60.20:0,60,818	0/0:20,0:20:54.18:0,54,735	0/0:20,0:20:51.15:0,51,665	0/0:18,0:18:54.18:0,54,737	0/0:15,0:15:45.15:0,45,615	0/0:19,0:19:54.15:0,54,706	0/0:23,0:23:66.22:0,66,893	0/0:19,0:19:51.17:0,51,696	0/0:7,0:7:21.05:0,21,270
chr10	101628093	.	CGAG	C	982.42	PASS	AB=0.944;AC=12;AF=0.286;AN=42;BaseQRankSum=5.360;DP=327;FS=8.171;HRun=0;HaplotypeScore=49.2154;InbreedingCoeff=0.4734;MQ=62.18;MQ0=19;MQRankSum=0.079;QD=8.54;ReadPosRankSum=3.939;VQSLOD=0.8688;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:1:2.99:0,3,24	./.	./.	./.	./.	0/0:13,0:12:6.02:0,6,117	0/0:17,0:17:14.93:0,15,152	1/1:7,0:5:2.76:36,3,0	0/1:14,1:15:40.65:41,0,240	0/0:11,0:10:24.95:0,25,421	0/0:6,0:5:9.02:0,9,142	0/0:8,0:7:1.25:0,1,3	0/0:13,0:12:7.73:0,8,31	0/0:7,0:6:0.47:0,0,1	0/0:10,0:10:9.17:0,9,129	./.	0/0:19,0:19:25.54:0,26,543	0/0:3,0:3:3.85:0,4,22	1/1:7,3:7:9.03:119,9,0	./.	1/1:26,32:58:39.20:746,39,0	0/1:10,0:9:43.68:44,0,106	0/0:8,0:8:12.03:0,12,191	0/0:27,0:26:30.10:0,30,555	0/0:7,0:7:9.01:0,9,112	1/1:3,2:5:8.86:95,9,0	1/1:7,2:9:3.01:41,3,0	./.
chr10	101628492	.	CAGAGAGAGAGAGAG	C	732.87	PASS	AB=1.000;AC=5;AF=0.093;AN=54;BaseQRankSum=4.859;DP=481;FS=38.820;HRun=0;HaplotypeScore=156.2370;InbreedingCoeff=0.6202;MQ=76.35;MQ0=11;MQRankSum=-3.386;QD=11.10;ReadPosRankSum=-2.008;VQSLOD=0.8203;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:3.01:0,3,197	0/0:3,0:5:9.03:0,9,497	./.	0/1:40,0:20:0:0,0,0	0/0:12,0:12:9.03:0,9,453	0/0:24,0:24:18.06:0,18,932	0/0:12,0:12:12.02:0,12,402	0/0:25,0:24:9.03:0,9,200	0/0:11,0:10:12.04:0,12,710	0/0:17,0:17:15.05:0,15,632	0/0:15,0:15:12.04:0,12,619	0/0:12,0:13:15.05:0,15,682	0/0:14,0:15:15.05:0,15,756	0/0:21,0:20:11.91:0,12,554	0/0:15,0:17:27.07:0,27,1315	0/0:14,0:14:15.02:0,15,719	0/0:16,0:15:19.62:0,20,1082	0/0:8,0:8:13.86:0,14,477	0/0:16,0:16:12.04:0,12,247	0/0:17,0:19:15.37:0,15,450	0/0:13,0:12:18.01:0,18,274	0/0:13,0:13:18.06:0,18,626	0/0:18,0:18:30.09:0,30,1132	0/0:17,0:19:27.09:0,27,1345	0/0:9,0:9:9.03:0,9,384	1/1:9,6:15:15.01:396,15,0	0/0:20,0:24:0.24:0,0,203	1/1:4,6:11:12.03:447,12,0
chr10	101629043	.	G	GA	3826.61	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-11.419;DP=484;FS=10.070;HRun=8;HaplotypeScore=55.2587;InbreedingCoeff=0.9303;MQ=67.03;MQ0=0;MQRankSum=-0.848;QD=27.93;ReadPosRankSum=3.409;VQSLOD=3.8245;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,12:13:36.11:415,36,0	1/1:0,5:5:15.04:173,15,0	0/0:5,0:5:2.93:0,3,27	0/0:4,0:4:6:0,6,55	1/1:4,26:30:72.14:808,72,0	0/0:19,0:19:57.03:0,57,521	0/0:10,0:11:32.05:0,32,280	0/0:24,0:24:54.02:0,54,492	0/0:17,0:17:48:0,48,434	0/0:34,0:34:99:0,99,906	0/0:27,0:27:78.04:0,78,714	1/1:1,12:13:5.63:319,6,0	1/1:1,20:21:54.16:623,54,0	1/1:3,13:16:36.11:415,36,0	0/0:20,0:20:51.01:0,51,462	1/1:2,10:12:30.09:346,30,0	0/0:18,0:18:42.02:0,42,384	1/1:4,23:27:63.19:727,63,0	0/0:15,0:15:42.02:0,42,382	0/0:25,0:25:75.02:0,75,678	0/0:11,0:11:30.01:0,30,275	0/0:11,0:11:33.02:0,33,302	0/0:14,0:14:39.02:0,39,357	0/0:9,0:9:17.08:0,17,163	0/0:16,0:16:41.97:0,42,371	0/0:22,0:22:60.02:0,60,546	0/0:24,0:24:66.03:0,66,604	0/0:21,0:21:60.03:0,60,549
chr10	101629629	.	C	CGTGTGTGTGTGTGTGT	12533.67	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=0.790;DP=893;FS=0.000;HRun=0;HaplotypeScore=346.5211;InbreedingCoeff=0.7885;MQ=57.12;MQ0=35;MQRankSum=-9.373;QD=26.84;ReadPosRankSum=-3.915;VQSLOD=2.3644;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:37:14.90:425,15,0	1/1:6,0:6:2.97:76,3,0	0/0:65,0:15:27.04:0,27,495	0/0:57,0:20:6.69:0,7,299	0/1:19,0:17:0:0,0,1	0/0:28,0:32:63.20:0,63,1995	0/0:26,0:28:57.18:0,57,1819	1/1:37,0:34:47.37:1289,47,0	0/0:31,0:37:78.27:0,78,2919	0/0:24,0:25:36.13:0,36,1289	0/0:23,0:23:42.13:0,42,1455	1/1:16,23:41:21.94:1104,22,0	1/1:32,0:32:26.85:1382,27,0	1/1:34,0:33:34.68:1257,35,0	0/0:36,0:37:78.25:0,78,2722	1/1:30,0:30:18.06:1153,18,0	0/1:28,0:28:82.02:82,0,2063	1/1:18,0:15:12.10:559,12,0	1/1:32,0:30:24.32:662,24,0	1/1:25,0:24:5.71:195,6,0	1/1:53,0:52:0.89:132,1,0	0/0:19,0:21:31.92:0,32,1255	0/0:29,0:29:51.16:0,51,1767	0/0:40,0:43:75.15:0,75,2748	0/0:25,0:25:46.31:0,46,1600	1/1:40,0:39:78.27:2955,78,0	1/1:25,0:25:30.10:1169,30,0	1/1:6,0:5:3.48:92,3,0
chr10	101629656	.	G	GTGTGT	3550.66	PASS	AB=0.767;AC=14;AF=0.250;AN=56;BaseQRankSum=8.287;DP=881;FS=8.492;HRun=0;HaplotypeScore=194.2695;InbreedingCoeff=-0.3492;MQ=48.75;MQ0=33;MQRankSum=-5.963;QD=8.54;ReadPosRankSum=0.425;VQSLOD=2.0334;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:40:99:125,0,301	0/1:5,3:9:44.62:45,0,108	0/0:60,0:18:51.05:0,51,786	0/0:66,0:21:59.73:0,60,801	0/0:12,0:14:12.48:0,12,161	0/0:33,0:33:95.81:0,96,1742	0/0:27,0:27:78.26:0,78,1516	0/1:22,0:30:99:482,0,596	0/0:33,0:33:93.32:0,93,1869	0/0:27,0:27:71.51:0,72,1274	0/0:20,0:20:55.43:0,55,1048	0/1:36,0:36:99:125,0,384	0/1:27,0:41:99:220,0,536	0/1:18,0:33:99:320,0,289	0/0:38,0:36:99:0,102,1933	0/1:19,2:21:99:137,0,179	0/0:28,0:31:0.41:0,0,1533	0/1:12,0:14:99:191,0,270	0/1:14,0:20:99:246,0,381	0/1:7,7:21:71.08:71,0,216	0/1:31,22:56:16.43:16,0,509	0/0:18,0:18:48.15:0,48,903	0/0:25,0:25:72.23:0,72,1386	0/0:40,0:40:99:0,99,1943	0/0:27,0:27:69.02:0,69,1274	0/1:22,15:42:99:1040,0,682	0/1:19,7:28:99:296,0,381	0/1:3,1:5:24.95:236,0,25
chr10	101629669	.	GGTA	G	58.20	PASS	AB=0.967;AC=5;AF=0.089;AN=56;BaseQRankSum=7.667;DP=804;FS=3.645;HRun=0;HaplotypeScore=168.6458;InbreedingCoeff=0.2495;MQ=55.12;MQ0=22;MQRankSum=-4.919;QD=0.46;ReadPosRankSum=-5.705;VQSLOD=0.9874;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:36,2:35:35.69:0,36,1200	0/0:6,0:6:11.72:0,12,295	0/1:48,0:21:1.38:1,0,1143	0/1:59,2:27:43.73:44,0,1413	0/0:16,0:15:20.47:0,20,489	0/0:35,0:35:99:0,102,2390	0/0:23,0:23:69.24:0,69,1606	0/0:35,0:33:89.94:0,90,2021	0/0:30,0:30:90.29:0,90,2123	0/0:25,0:25:75.22:0,75,1747	0/0:20,0:20:57.20:0,57,1383	0/0:34,0:34:71.88:0,72,1611	0/0:38,0:37:81.62:0,82,1795	0/0:31,0:30:2.34:0,2,1091	0/0:38,0:38:99:0,108,2338	0/0:17,0:17:38.16:0,38,779	0/0:29,0:30:40.09:0,40,1920	0/1:10,1:13:16.72:17,0,628	0/0:17,0:15:45.09:0,45,1034	0/0:19,0:19:4.20:0,4,746	0/0:52,0:49:63.49:0,63,1720	0/0:20,0:20:60.21:0,60,1470	0/0:25,0:25:72.21:0,72,1713	0/0:44,0:43:99:0,109,2608	0/0:26,0:26:68.95:0,69,1563	0/0:33,0:33:75.69:0,76,1881	0/0:24,0:24:14.94:0,15,1049	1/1:2,1:4:6.42:102,6,0
chr10	101630728	.	AAC	A	609.72	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=9.809;DP=694;FS=3.078;HRun=0;HaplotypeScore=118.8017;InbreedingCoeff=0.4533;MQ=62.53;MQ0=29;MQRankSum=-3.888;QD=2.40;ReadPosRankSum=-1.368;VQSLOD=2.3474;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:17:4.61:33,0,5	1/1:4,0:4:2.80:13,3,0	0/0:64,0:17:22.70:0,23,256	0/0:55,0:18:9.80:0,10,73	0/0:20,0:20:48.14:0,48,717	0/0:29,0:29:41.67:0,42,873	0/0:24,0:24:7.01:0,7,795	0/1:36,0:35:0.72:1,0,174	0/0:26,0:26:60.18:0,60,918	0/0:30,0:28:38.35:0,38,1026	0/0:20,0:20:54.18:0,54,851	0/0:10,0:10:18.06:0,18,278	0/0:18,0:18:36.10:0,36,540	0/1:20,0:20:5.18:5,0,343	0/0:25,0:25:62.99:0,63,941	0/1:23,0:23:0.18:74,0,0	0/0:20,0:22:45.24:0,45,692	1/1:10,5:15:30.06:340,30,0	0/1:10,0:11:8.43:60,0,8	1/1:17,0:17:9.03:44,9,0	0/1:43,0:44:20.07:20,0,50	0/0:29,0:28:62.13:0,62,1014	0/0:18,0:18:35.52:0,36,501	0/0:33,1:34:40.47:0,40,1176	0/0:16,0:16:29.91:0,30,414	1/1:33,0:33:6.77:125,7,0	1/1:22,0:22:10.55:45,11,0	0/1:12,0:12:22.18:22,0,34
chr10	101630740	.	CACACAA	C	2760.23	PASS	AB=0.967;AC=19;AF=0.339;AN=56;BaseQRankSum=11.928;DP=723;FS=2.656;HRun=0;HaplotypeScore=162.2312;InbreedingCoeff=0.5373;MQ=58.76;MQ0=29;MQRankSum=-3.231;QD=9.14;ReadPosRankSum=-1.729;VQSLOD=2.7946;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:53.80:455,54,0	1/1:4,0:4:8.94:93,9,0	0/0:59,0:12:3.36:0,3,102	0/1:47,0:10:12.02:13,0,12	0/0:23,0:23:4.27:0,4,874	0/0:27,0:27:63.53:0,64,1111	0/0:24,0:24:62.18:0,62,1048	0/1:34,0:33:60.68:310,0,61	0/0:27,0:27:77.40:0,77,1687	0/0:31,0:29:72.58:0,73,1288	0/0:22,0:22:63.14:0,63,1382	0/0:16,0:16:17.93:0,18,275	0/0:22,0:22:34.97:0,35,668	0/0:21,0:21:19.78:0,20,355	0/0:25,0:25:63.12:0,63,1707	1/1:23,0:23:47.68:557,48,0	0/0:22,0:22:56.71:0,57,1339	1/1:13,0:13:32.94:179,33,0	0/1:12,3:15:16.38:184,0,16	1/1:16,1:17:24.36:210,24,0	0/1:44,0:44:9.41:81,0,9	0/0:31,0:30:56.45:0,56,1912	0/0:17,0:17:20.06:0,20,724	0/0:35,0:35:81.41:0,81,2100	0/0:19,0:19:45.02:0,45,800	1/1:42,0:41:80.57:735,81,0	1/1:27,0:27:2.10:82,2,0	0/1:13,0:13:13.19:53,0,13
chr10	101630742	.	CACAA	C	3658.44	PASS	AB=0.845;AC=20;AF=0.357;AN=56;BaseQRankSum=11.766;DP=717;FS=4.921;HRun=0;HaplotypeScore=138.1750;InbreedingCoeff=0.5223;MQ=58.78;MQ0=31;MQRankSum=-4.374;QD=11.09;ReadPosRankSum=-1.352;VQSLOD=2.8038;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:53.58:398,54,0	1/1:3,0:3:8.94:78,9,0	0/0:60,0:12:3.36:0,3,102	0/1:46,0:9:11.52:14,0,12	0/0:23,0:23:4.07:0,4,648	0/0:26,0:26:63.49:0,63,881	0/0:25,0:25:40.24:0,40,807	0/1:33,0:32:22.84:382,0,23	0/0:28,0:28:80.09:0,80,1339	0/0:32,0:30:58.57:0,59,1043	0/0:22,0:22:62.88:0,63,1081	0/0:17,0:17:17.93:0,18,225	0/0:21,0:21:34.94:0,35,494	0/0:20,0:20:9.66:0,10,251	0/0:26,0:26:68.13:0,68,1327	1/1:23,0:23:47.06:431,47,0	0/0:20,0:20:43.03:0,43,983	1/1:13,0:13:32.93:166,33,0	0/1:15,0:15:0.06:192,0,0	1/1:2,14:16:24.80:276,25,0	0/1:8,34:42:8.99:178,0,9	0/0:31,0:30:56.43:0,56,1490	0/0:17,0:17:20:0,20,560	0/1:35,0:35:6.29:6,0,1483	0/0:19,0:19:44.98:0,45,625	1/1:4,35:38:99:1167,101,0	1/1:1,26:27:2.58:212,3,0	0/1:1,12:13:12.96:158,0,13
chr10	101630744	.	CAA	C	2487.70	PASS	AB=0.971;AC=20;AF=0.357;AN=56;BaseQRankSum=12.745;DP=713;FS=6.108;HRun=3;HaplotypeScore=121.7174;InbreedingCoeff=0.6066;MQ=57.23;MQ0=31;MQRankSum=-3.876;QD=8.43;ReadPosRankSum=-0.805;VQSLOD=-0.0796;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,7:27:59.57:391,60,0	1/1:1,2:3:8.92:64,9,0	0/0:58,0:10:3.36:0,3,102	0/1:44,0:8:10.89:13,0,11	0/0:24,0:24:4.66:0,5,451	0/0:25,0:25:54.69:0,55,689	0/0:26,0:26:34.63:0,35,622	1/1:7,25:31:3.62:403,4,0	0/0:28,0:28:76.04:0,76,992	0/0:32,0:30:43.39:0,43,802	0/0:22,0:22:62.66:0,63,818	0/0:17,0:17:17.93:0,18,177	0/0:20,0:20:34.94:0,35,347	0/0:19,0:19:9.65:0,10,186	0/0:26,0:26:55.68:0,56,935	1/1:13,10:23:40.23:306,40,0	0/0:20,0:20:28.41:0,28,686	1/1:14,0:14:32.73:152,33,0	0/1:13,1:15:1.85:166,0,2	1/1:16,0:16:24.73:166,25,0	0/1:42,0:42:9.21:80,0,9	0/0:31,0:30:48.46:0,48,1070	0/0:16,0:16:18.26:0,18,417	0/0:35,0:35:3.29:0,3,973	0/0:19,0:19:26.25:0,26,424	1/1:38,0:37:95.29:794,95,0	1/1:27,0:27:2.35:83,2,0	0/1:13,0:13:13.01:61,0,13
chr10	101630762	.	CACACACACACACACAT	C	2992.79	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=4.290;DP=714;FS=0.000;HRun=0;HaplotypeScore=276.3522;InbreedingCoeff=0.8361;MQ=53.64;MQ0=22;MQRankSum=-4.830;QD=27.46;ReadPosRankSum=0.700;VQSLOD=2.2584;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:30:32.33:1221,32,0	1/1:9,0:9:27.09:575,27,0	0/1:26,0:5:11.49:11,0,85	0/0:34,0:5:9.78:0,10,110	0/0:28,0:28:57.52:0,58,2476	0/0:25,0:25:53.01:0,53,2420	0/0:23,0:23:58.04:0,58,2497	0/0:41,0:39:99:0,105,2070	0/0:27,0:27:75.26:0,75,4303	0/0:27,0:26:71.07:0,71,2803	0/0:21,0:21:54.16:0,54,2969	0/0:21,0:21:20.94:0,21,602	0/0:20,0:20:38.94:0,39,1553	0/0:18,0:18:24.08:0,24,932	0/0:28,0:28:66.23:0,66,3971	1/1:14,14:28:32.80:1072,33,0	0/0:22,0:22:56.23:0,56,3302	1/1:15,0:15:6.78:271,7,0	0/0:22,0:22:53.13:0,53,957	0/0:22,0:22:45:0,45,909	0/0:46,0:46:38.14:0,38,847	0/0:32,0:31:75.26:0,75,4465	0/0:16,0:16:45.15:0,45,1992	0/0:36,0:36:96.29:0,96,5306	0/0:19,0:19:45.14:0,45,2324	0/0:38,0:37:99:0,102,3036	0/0:26,0:26:36.58:0,37,880	0/0:13,0:13:22.63:0,23,590
chr10	101630766	.	CACACACACACAT	C	1848.24	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=7.472;DP=688;FS=2.007;HRun=0;HaplotypeScore=228.0692;InbreedingCoeff=0.8719;MQ=54.18;MQ0=19;MQRankSum=-6.037;QD=19.87;ReadPosRankSum=1.373;VQSLOD=2.8125;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,7:28:33.44:690,33,0	1/1:7,2:9:16.85:229,17,0	0/1:21,0:4:6.43:6,0,24	0/0:30,0:4:9.36:0,9,112	0/0:29,0:29:61.44:0,61,1877	0/0:23,0:23:50.15:0,50,1750	0/0:19,0:19:32.35:0,32,1761	0/0:39,0:37:99:0,106,1271	0/0:26,0:26:78.21:0,78,3299	0/0:29,0:28:80.17:0,80,2263	0/0:24,0:24:63.15:0,63,2376	0/0:21,0:21:23.95:0,24,523	0/0:19,0:19:35.88:0,36,1175	0/0:19,0:19:24.06:0,24,728	0/0:26,0:26:66.21:0,66,3007	1/1:15,9:24:30.92:852,31,0	0/0:21,0:21:53.27:0,53,2482	1/1:10,0:10:21.31:232,21,0	0/0:22,0:22:51.47:0,51,576	0/0:23,0:23:49.92:0,50,719	0/0:47,0:47:39.90:0,40,604	0/0:33,0:32:78.24:0,78,3465	0/0:16,0:16:45.14:0,45,1495	0/0:35,0:35:93.30:0,93,3952	0/0:19,0:19:45.13:0,45,1787	0/0:36,0:35:99:0,99,1706	0/0:26,0:26:36.15:0,36,659	0/0:13,0:13:21.96:0,22,432
chr10	101631062	.	ATATACTCCACGGTC	A	6328.45	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.071;DP=689;FS=4.217;HRun=0;HaplotypeScore=264.3974;InbreedingCoeff=0.9993;MQ=89.27;MQ0=0;MQRankSum=-11.670;QD=97.36;ReadPosRankSum=2.730;VQSLOD=4.0657;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:29:66.23:2699,66,0	1/1:0,9:9:27.09:1168,27,0	0/0:24,0:24:72.25:0,72,4538	0/0:29,0:29:81.28:0,81,4709	0/0:30,0:30:87.30:0,87,5931	0/0:18,0:18:54.19:0,54,3235	0/0:23,0:23:69.24:0,69,4913	0/0:31,0:31:93.29:0,93,5376	0/0:21,0:21:63.22:0,63,4414	0/0:30,0:30:90.31:0,90,6146	0/0:20,0:20:60.21:0,60,3901	0/0:28,0:28:84.29:0,84,5396	0/0:13,0:13:39.13:0,39,2286	0/0:25,0:25:72.25:0,72,5001	0/0:31,0:31:87.28:0,87,5683	1/1:7,20:27:57.20:2462,57,0	0/0:33,0:33:93.27:0,93,5938	0/0:11,0:11:33.11:0,33,2316	0/0:23,0:23:69.24:0,69,4250	0/0:32,0:32:93.31:0,93,5701	0/0:23,0:23:69.24:0,69,3914	0/0:28,0:28:84.29:0,84,5587	0/0:22,0:22:66.23:0,66,4297	0/0:28,0:28:78.27:0,78,5230	0/0:27,0:27:81.27:0,81,5439	0/0:32,0:32:96.32:0,96,6423	0/0:31,0:31:90.31:0,90,5870	0/0:11,0:11:30.10:0,30,2088
chr10	101631432	.	ATT	A	6832.84	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=9.726;DP=607;FS=0.331;HRun=13;HaplotypeScore=80.1871;InbreedingCoeff=0.9972;MQ=70.77;MQ0=1;MQRankSum=-1.281;QD=20.71;ReadPosRankSum=5.100;VQSLOD=4.4749;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:29:70.62:662,71,0	1/1:1,15:17:35.73:322,36,0	0/0:15,0:12:26.45:0,26,268	0/0:11,0:11:23.93:0,24,274	1/1:3,30:34:77.76:739,78,0	0/0:24,0:25:69.19:0,69,962	0/0:14,0:16:35.56:0,36,446	1/1:12,21:34:59.63:559,60,0	0/0:19,0:19:54.17:0,54,761	0/0:28,0:28:75.23:0,75,1050	0/0:27,0:32:73.04:0,73,899	1/1:2,21:22:45.04:437,45,0	1/1:2,16:19:47.79:448,48,0	1/1:3,17:20:39.04:378,39,0	0/0:26,0:26:61.41:0,61,831	1/1:3,13:16:33.04:320,33,0	0/0:21,0:22:56.68:0,57,789	1/1:4,19:24:53.79:507,54,0	1/1:3,13:16:39.01:374,39,0	1/1:3,24:27:59.94:580,60,0	1/1:2,13:15:29.90:291,30,0	0/0:23,1:24:40.13:0,40,927	0/0:18,0:21:50.06:0,50,605	0/0:16,0:17:41.59:0,42,517	0/0:21,0:21:54.17:0,54,762	1/1:7,21:28:62.97:611,63,0	1/1:4,19:22:48.03:466,48,0	1/1:1,4:5:15.01:139,15,0
chr10	101633066	.	GTCTCTGTCTC	G	537.36	PASS	AB=0.560;AC=7;AF=0.125;AN=56;BaseQRankSum=5.112;DP=649;FS=10.098;HRun=0;HaplotypeScore=202.9878;InbreedingCoeff=0.7415;MQ=54.89;MQ0=12;MQRankSum=-4.084;QD=6.89;ReadPosRankSum=-0.366;VQSLOD=1.4221;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:87.27:0,87,2240	0/0:14,0:14:24.96:0,25,582	0/0:13,0:10:24.06:0,24,605	0/0:20,0:16:36.11:0,36,1216	1/1:3,13:16:2.97:20,3,0	0/0:22,0:21:35.78:0,36,1323	0/0:29,0:29:65.70:0,66,2054	0/0:42,0:39:96.31:0,96,2700	0/0:23,0:23:66.22:0,66,2426	0/0:20,0:18:1.82:0,2,1068	0/0:12,0:12:20.89:0,21,407	1/1:4,13:17:9.73:124,10,0	0/1:6,18:27:3.69:290,0,4	1/1:3,12:17:12:233,12,0	0/0:22,0:22:51.16:0,51,1407	0/0:19,0:19:29.35:0,29,774	0/0:49,0:49:99:0,138,4811	0/0:21,0:20:51.25:0,51,1865	0/0:24,0:19:42.13:0,42,886	0/0:19,0:19:26.78:0,27,791	0/0:56,0:54:99:0,118,3262	0/0:20,0:20:35.95:0,36,875	0/0:15,0:14:21.05:0,21,546	0/0:30,0:30:81.21:0,81,2511	0/0:23,0:21:54.01:0,54,1717	0/0:20,0:18:47.52:0,48,980	0/0:16,0:16:32.94:0,33,859	0/0:6,0:6:18.03:0,18,356
chr10	101633072	.	GTC	G	281.43	PASS	AB=0.789;AC=7;AF=0.125;AN=56;BaseQRankSum=7.323;DP=623;FS=2.438;HRun=0;HaplotypeScore=121.6928;InbreedingCoeff=0.6154;MQ=52.57;MQ0=13;MQRankSum=-2.271;QD=3.47;ReadPosRankSum=2.143;VQSLOD=2.8135;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:83.86:0,84,711	0/0:13,0:13:19.36:0,19,131	0/0:9,0:7:14.77:0,15,109	0/0:13,0:12:29.94:0,30,260	1/1:15,1:16:3.01:42,3,0	0/0:22,0:21:29.77:0,30,438	0/0:28,0:28:53.27:0,53,748	0/0:36,0:33:89.45:0,89,714	0/0:24,0:24:66.85:0,67,778	0/0:21,0:19:20.24:0,20,447	0/0:13,0:13:2.70:0,3,192	1/1:13,3:16:8.90:78,9,0	0/1:22,4:28:35.18:202,0,35	1/1:15,2:19:3.21:82,3,0	0/0:21,0:21:35.85:0,36,621	0/0:18,0:18:26.38:0,26,188	0/0:47,0:47:83.36:0,83,1449	0/0:21,0:20:19.39:0,19,324	0/0:22,0:18:43.70:0,44,329	0/0:18,0:18:22.74:0,23,173	0/0:57,0:55:99:0,114,1008	0/0:20,0:20:17.87:0,18,350	0/0:14,0:13:21.04:0,21,315	0/0:27,0:27:72.11:0,72,1055	0/0:23,0:21:48.02:0,48,541	0/0:21,0:18:49.54:0,50,389	0/0:15,0:15:26.56:0,27,188	0/0:4,0:4:11.96:0,12,107
chr10	101633076	.	CTGTGTG	C	2008.11	PASS	AB=0.944;AC=19;AF=0.339;AN=56;BaseQRankSum=1.617;DP=632;FS=45.492;HRun=0;HaplotypeScore=154.1744;InbreedingCoeff=0.5949;MQ=52.05;MQ0=13;MQRankSum=1.124;QD=7.55;ReadPosRankSum=-2.050;VQSLOD=0.9688;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:30.10:478,30,0	1/1:4,0:12:2.80:41,3,0	0/0:10,0:7:3.01:0,3,51	0/0:13,0:11:1.25:0,1,3	0/0:16,0:16:3.01:0,3,44	0/0:21,0:21:26.69:0,27,545	0/0:31,0:31:43.86:0,44,735	1/1:33,0:29:13.94:90,14,0	0/1:25,0:25:3.46:3,0,853	0/0:23,0:22:39.13:0,39,657	0/0:10,0:14:15.05:0,15,209	0/0:17,0:17:5.39:0,5,63	0/0:31,0:29:18.81:0,19,254	0/0:19,0:19:2.32:0,2,44	0/0:19,0:20:33.11:0,33,706	1/1:8,0:18:9.03:124,9,0	0/0:42,0:46:84.21:0,84,1724	0/0:18,0:20:23.62:0,24,282	1/1:18,1:16:12.04:226,12,0	1/1:6,12:18:5.88:83,6,0	1/1:59,2:59:46.01:657,46,0	0/0:16,0:17:21.07:0,21,405	0/0:15,0:14:17.55:0,18,294	0/0:26,0:26:54.04:0,54,1153	0/0:23,0:21:18.06:0,18,345	0/1:23,0:20:76.02:398,0,76	1/1:9,6:15:2.76:20,3,0	0/1:4,0:5:4.52:69,0,5
chr10	101633125	.	AGT	A	506.44	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.094;DP=849;FS=1.876;HRun=0;HaplotypeScore=146.6237;InbreedingCoeff=0.9225;MQ=50.71;MQ0=28;MQRankSum=-2.203;QD=20.26;ReadPosRankSum=0.120;VQSLOD=4.1302;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,123,1977	0/0:14,0:13:24.08:0,24,377	0/0:74,0:11:9.49:0,9,149	0/0:85,0:10:19.61:0,20,282	0/0:18,0:18:51.16:0,51,830	0/0:22,0:22:48.15:0,48,774	0/0:31,0:32:71.43:0,71,1173	0/0:38,0:38:78.23:0,78,1249	0/0:18,0:18:39.12:0,39,632	0/0:31,0:30:87.25:0,87,1432	0/0:19,0:19:45.15:0,45,760	0/0:27,0:26:37.37:0,37,616	0/0:29,0:29:54.13:0,54,841	0/0:15,0:14:18.06:0,18,308	0/0:25,0:24:48.12:0,48,740	0/0:23,0:23:47.98:0,48,716	0/0:41,0:40:85.05:0,85,1691	1/1:10,15:24:23.67:600,24,0	0/0:25,0:21:41.97:0,42,661	0/0:20,0:20:42.06:0,42,685	0/0:71,0:71:99:0,153,2486	0/0:25,0:25:57.16:0,57,920	0/0:15,0:15:30.09:0,30,487	0/0:35,0:34:84.27:0,84,1388	0/0:21,0:19:45.11:0,45,691	0/0:27,0:26:48.48:0,48,1111	0/0:12,0:12:18.02:0,18,276	0/0:9,0:9:21.07:0,21,360
chr10	101633310	.	TA	T	13661.48	PASS	AB=0.761;AC=52;AF=0.929;AN=56;BaseQRankSum=-3.084;DP=662;FS=3.826;HRun=1;HaplotypeScore=306.0202;InbreedingCoeff=0.3285;MQ=43.36;MQ0=14;MQRankSum=-1.285;QD=21.58;ReadPosRankSum=1.555;VQSLOD=4.0866;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,20:24:45.60:602,46,0	1/1:1,12:13:24.55:333,25,0	0/1:22,2:6:23.05:23,0,112	0/0:28,1:9:17.59:0,18,131	1/1:0,18:17:3.07:44,3,0	1/1:0,29:29:63.14:849,63,0	1/1:2,22:23:36.11:484,36,0	1/1:3,31:28:67.45:898,67,0	1/1:0,23:22:52.40:696,52,0	1/1:2,35:36:89.56:1355,90,0	1/1:0,18:18:8.67:126,9,0	1/1:1,27:28:60.67:832,61,0	1/1:1,26:27:55.12:743,55,0	1/1:1,30:30:66.20:877,66,0	1/1:2,26:27:39.13:533,39,0	1/1:1,22:23:54.18:747,54,0	0/1:4,9:13:13.08:228,0,13	1/1:0,5:4:6.02:84,6,0	1/1:2,19:19:48.16:659,48,0	1/1:1,20:22:31.06:367,31,0	1/1:14,27:37:6.20:202,6,0	1/1:1,30:31:39.53:515,40,0	1/1:1,15:16:13.87:151,14,0	1/1:2,16:17:5.63:69,6,0	1/1:3,28:30:53.89:724,54,0	1/1:1,28:26:77.84:1044,78,0	1/1:1,6:7:18.03:229,18,0	1/1:2,4:6:18.06:247,18,0
chr10	101633315	.	TC	T	12436.58	PASS	AB=0.913;AC=53;AF=0.946;AN=56;BaseQRankSum=-1.103;DP=621;FS=1.248;HRun=1;HaplotypeScore=315.3501;InbreedingCoeff=0.4358;MQ=42.91;MQ0=10;MQRankSum=-1.540;QD=20.83;ReadPosRankSum=0.537;VQSLOD=3.8215;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:19:38.75:491,39,0	1/1:0,12:12:24.08:320,24,0	0/1:19,1:7:10.09:10,0,116	0/0:21,3:9:20.69:0,21,195	1/1:1,18:18:1.95:41,2,0	1/1:0,31:31:63.20:845,63,0	1/1:1,21:22:39.10:490,39,0	1/1:0,30:23:61.44:829,61,0	1/1:1,25:24:52.01:678,52,0	1/1:3,34:36:99:1366,101,0	1/1:0,18:18:7.97:125,8,0	1/1:1,29:29:63.09:807,63,0	1/1:1,25:26:60.19:784,60,0	1/1:1,29:29:61.96:757,62,0	1/1:2,27:28:33.05:387,33,0	1/1:1,24:25:51.13:681,51,0	1/1:1,9:10:21.07:277,21,0	1/1:1,2:2:3.01:42,3,0	1/1:1,18:17:45.15:612,45,0	1/1:1,21:20:20.49:220,20,0	1/1:7,26:28:8.26:112,8,0	1/1:2,33:34:34.97:435,35,0	1/1:1,13:14:8.80:111,9,0	1/1:1,15:15:5.78:62,6,0	1/1:2,26:27:41.41:507,41,0	1/1:2,28:27:80.85:1077,81,0	1/1:0,6:6:18.02:223,18,0	1/1:1,3:4:12.01:147,12,0
chr10	101633358	.	TA	T	9693.09	PASS	AB=0.952;AC=54;AF=0.964;AN=56;BaseQRankSum=-0.912;DP=648;FS=3.501;HRun=1;HaplotypeScore=291.0088;InbreedingCoeff=0.0032;MQ=48.48;MQ0=11;MQRankSum=-1.650;QD=14.96;ReadPosRankSum=1.624;VQSLOD=4.5026;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:12:9.03:113,9,0	1/1:0,8:7:11.87:149,12,0	0/1:45,1:15:38.71:39,0,102	0/1:54,3:18:41.67:42,0,83	1/1:1,11:11:0.87:3,1,0	1/1:0,24:24:39.11:544,39,0	1/1:5,26:31:47.73:620,48,0	1/1:0,33:30:81.27:1092,81,0	1/1:1,20:21:33.91:425,34,0	1/1:0,29:26:75.25:1026,75,0	1/1:0,15:15:2.76:42,3,0	1/1:1,26:25:45.09:568,45,0	1/1:3,27:30:78.24:952,78,0	1/1:0,27:25:33.57:416,34,0	1/1:1,33:33:27.56:364,28,0	1/1:0,15:15:30.09:370,30,0	1/1:1,8:9:15.05:209,15,0	1/1:0,4:4:9.03:122,9,0	1/1:2,13:13:12.97:418,13,0	1/1:1,24:25:10.08:104,10,0	1/1:5,21:22:2.46:22,2,0	1/1:3,32:34:19.97:278,20,0	1/1:1,13:14:3:43,3,0	1/1:1,14:15:5.99:63,6,0	1/1:0,28:28:8.68:114,9,0	1/1:4,33:35:99:1265,99,0	1/1:1,9:10:15.52:206,16,0	1/1:0,3:3:7.84:83,8,0
chr10	101633364	.	GTGA	G	6674.48	PASS	AB=0.910;AC=45;AF=0.804;AN=56;BaseQRankSum=-4.441;DP=708;FS=5.497;HRun=0;HaplotypeScore=317.3059;InbreedingCoeff=0.1761;MQ=51.43;MQ0=15;MQRankSum=-1.395;QD=10.43;ReadPosRankSum=5.530;VQSLOD=3.5040;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,8:12:8.94:120,9,0	1/1:1,6:6:11.95:169,12,0	0/0:52,0:17:25.56:0,26,205	0/1:66,0:23:9.94:10,0,320	0/1:1,10:10:0.35:0,0,0	0/1:25,0:24:14.17:131,0,14	0/1:34,0:33:13.08:269,0,13	1/1:37,0:34:34.68:501,35,0	1/1:21,1:22:4.89:176,5,0	1/1:26,2:26:10.12:530,10,0	0/0:15,0:15:2.08:0,2,16	1/1:8,20:25:45.43:636,45,0	1/1:6,22:28:72.23:1158,72,0	1/1:8,20:27:30:426,30,0	0/1:31,4:33:8.58:133,0,9	1/1:7,9:16:32.91:430,33,0	1/1:12,0:10:20.84:166,21,0	1/1:5,0:5:14.93:152,15,0	1/1:18,0:16:36.10:192,36,0	0/1:28,0:28:10.26:75,0,10	1/1:40,2:33:21.24:228,21,0	0/1:33,1:34:14.40:35,0,14	1/1:15,1:16:2.49:19,2,0	1/1:18,0:15:14.86:105,15,0	1/1:32,0:32:6.25:97,6,0	1/1:39,0:37:98.83:698,99,0	1/1:12,0:11:14.80:151,15,0	1/1:4,0:4:8.50:67,8,0
chr10	101633366	.	GA	G	10009.85	PASS	AB=0.791;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.646;DP=694;FS=0.757;HRun=1;HaplotypeScore=279.0721;InbreedingCoeff=0.5365;MQ=53.36;MQ0=16;MQRankSum=-3.793;QD=15.64;ReadPosRankSum=3.578;VQSLOD=4.6126;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,4:12:8.98:102,9,0	1/1:7,1:7:11.83:142,12,0	0/0:53,1:17:26.87:0,27,220	0/1:64,3:23:35.86:36,0,226	0/1:10,1:10:0.33:0,0,0	1/1:0,22:21:38.81:391,39,0	1/1:2,27:30:29.41:523,29,0	1/1:1,16:31:87.26:1110,87,0	1/1:1,18:23:27.87:330,28,0	1/1:3,22:24:69.22:937,69,0	0/1:0,14:14:0.26:0,0,0	1/1:21,7:26:47.29:574,47,0	1/1:24,4:29:75.22:989,75,0	1/1:20,9:28:29.96:352,30,0	1/1:6,27:36:24.69:284,25,0	1/1:9,7:16:32.95:366,33,0	1/1:1,11:10:21.07:293,21,0	1/1:0,5:5:15.04:189,15,0	1/1:1,7:16:48.15:620,48,0	1/1:0,14:25:12.10:155,12,0	1/1:12,17:32:29.58:383,30,0	1/1:2,27:31:19.65:147,20,0	1/1:4,12:16:5.85:40,6,0	1/1:1,15:15:14.68:143,15,0	1/1:0,29:29:13.30:139,13,0	1/1:3,13:37:99:1380,107,0	1/1:0,5:9:18.53:247,19,0	1/1:1,2:5:11.99:138,12,0
chr10	101633426	.	G	GGT	2761.98	PASS	AB=0.889;AC=9;AF=0.161;AN=56;BaseQRankSum=7.338;DP=1041;FS=4.890;HRun=0;HaplotypeScore=245.5435;InbreedingCoeff=0.6697;MQ=49.44;MQ0=37;MQRankSum=-1.482;QD=15.09;ReadPosRankSum=0.895;VQSLOD=2.9144;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,29:39:73.03:1343,73,0	1/1:2,8:10:24.08:396,24,0	0/0:69,0:14:11.57:0,12,138	0/1:80,0:17:0.61:1,0,161	0/0:22,0:21:47.69:0,48,587	0/0:23,0:22:54.09:0,54,640	0/0:37,0:36:46.57:0,47,868	0/0:48,0:44:72.14:0,72,830	0/0:32,0:33:60.43:0,60,831	0/0:50,0:50:99:0,120,1429	0/0:19,0:18:36.11:0,36,449	0/0:29,0:27:48:0,48,545	0/0:24,0:24:51.12:0,51,620	0/0:29,0:29:48.62:0,49,610	0/0:32,0:31:54:0,54,675	1/1:6,18:24:57.19:938,57,0	0/0:44,0:42:97.48:0,97,1092	0/1:8,5:12:4.51:226,0,5	0/0:33,0:31:42.32:0,42,600	0/0:33,0:32:66.20:0,66,825	0/0:132,0:125:99:0,165,2334	0/0:38,0:37:77.64:0,78,1097	0/1:16,1:17:10.42:10,0,411	0/0:50,0:48:81.22:0,81,959	0/0:27,0:27:51.12:0,51,621	0/0:46,0:45:99:0,115,1390	0/0:19,0:19:31:0,31,557	0/0:10,0:10:5.08:0,5,209
chr10	101633444	.	TTTA	T	330.46	PASS	AB=0.828;AC=4;AF=0.071;AN=56;BaseQRankSum=8.589;DP=987;FS=38.577;HRun=0;HaplotypeScore=223.4442;InbreedingCoeff=-0.0860;MQ=51.92;MQ0=35;MQRankSum=-7.306;QD=2.33;ReadPosRankSum=-1.654;VQSLOD=1.4127;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,5:36:79.19:79,0,1440	0/0:9,0:8:23.29:0,23,516	0/0:53,1:8:6.43:0,6,166	0/0:72,0:16:36.29:0,36,547	0/0:23,0:22:62.01:0,62,1421	0/0:25,0:24:69.15:0,69,1527	0/0:35,2:37:5.72:0,6,1975	0/0:40,0:33:87.29:0,87,2088	0/0:35,1:36:33.04:0,33,2023	0/0:41,0:41:99:0,123,2787	0/0:20,0:19:52.95:0,53,1193	0/0:30,0:28:72.16:0,72,1498	0/0:25,0:25:75.19:0,75,1684	0/0:28,1:29:15.57:0,16,1418	0/0:29,0:28:71.90:0,72,1622	0/0:21,0:21:63.21:0,63,1394	0/1:38,4:40:73.14:73,0,2292	0/1:6,6:11:99:215,0,309	0/0:32,0:28:78.21:0,78,1745	0/0:27,0:27:77.03:0,77,1750	0/0:116,13:119:99:0,100,5538	0/0:37,1:38:71:0,71,2528	0/0:21,0:21:57.13:0,57,1288	0/1:43,9:49:72.19:72,0,2222	0/0:23,0:23:63.17:0,63,1433	0/0:50,1:50:91.71:0,92,3338	0/0:21,0:21:57.07:0,57,1182	0/0:9,0:9:24.08:0,24,590
chr10	101633730	.	GGT	G	6068.54	PASS	AB=0.891;AC=17;AF=0.327;AN=52;BaseQRankSum=11.868;DP=870;FS=1.509;HRun=0;HaplotypeScore=144.7655;InbreedingCoeff=0.7413;MQ=54.25;MQ0=49;MQRankSum=-0.427;QD=17.90;ReadPosRankSum=2.129;VQSLOD=5.0379;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,26:43:80.46:953,80,0	0/1:8,6:14:5.93:131,0,6	0/0:51,0:15:19.12:0,19,237	0/0:55,1:11:14.32:0,14,156	1/1:12,22:33:66.20:800,66,0	0/0:32,0:32:63.08:0,63,976	0/0:37,0:36:96.31:0,96,1508	0/0:7,0:4:3.92:0,4,14	0/0:37,1:38:65.90:0,66,1504	0/0:31,0:31:74.97:0,75,1119	0/0:21,0:20:36.12:0,36,581	1/1:24,22:45:77.66:899,78,0	1/1:17,20:38:74.89:864,75,0	1/1:7,33:40:60.14:711,60,0	0/0:37,1:38:56.41:0,56,1360	1/1:18,15:33:46.56:668,47,0	0/0:37,0:38:42.02:0,42,1058	1/1:12,25:38:87.10:1025,87,0	0/0:18,0:10:2.22:0,2,7	0/0:8,0:7:2.46:0,2,10	0/1:35,0:29:3.60:12,0,4	0/0:41,0:42:76.79:0,77,1185	0/0:19,0:19:44.98:0,45,655	0/0:60,1:62:99:0,133,2281	0/0:26,0:25:46.79:0,47,676	0/1:14,0:12:5.34:6,0,5	./.	./.
chr10	101633739	.	G	GGTA	444.67	PASS	AB=0.894;AC=4;AF=0.071;AN=56;BaseQRankSum=3.093;DP=843;FS=3.832;HRun=0;HaplotypeScore=181.5154;InbreedingCoeff=-0.0924;MQ=55.02;MQ0=41;MQRankSum=-2.140;QD=7.94;ReadPosRankSum=-4.300;VQSLOD=2.2056;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:99:0,114,1320	0/0:12,0:12:24.06:0,24,334	0/0:49,0:15:41.91:0,42,561	0/0:62,0:10:26.75:0,27,407	0/0:31,0:30:81.13:0,81,840	0/0:31,0:31:84.14:0,84,1433	0/0:41,0:40:99:0,103,2050	0/0:6,0:2:5.38:0,5,46	0/0:39,0:39:99:0,114,2081	0/0:34,0:34:99:0,102,1811	0/0:22,0:21:51.65:0,52,946	0/0:44,0:42:99:0,114,1397	0/0:35,0:35:99:0,102,1163	0/0:36,0:36:69.13:0,69,742	0/0:41,0:41:99:0,115,1976	0/0:30,0:29:84.18:0,84,1016	0/0:34,0:34:67.37:0,67,1616	0/0:37,0:37:99:0,105,1072	0/1:9,1:5:45.83:124,0,46	0/1:7,1:5:50.07:50,0,74	0/1:27,0:26:99:190,0,157	0/0:42,0:43:99:0,102,1838	0/0:19,0:19:54.08:0,54,961	0/0:64,0:64:99:0,172,3066	0/0:27,0:26:56.29:0,56,1036	0/1:4,2:6:37.23:189,0,37	0/0:4,1:4:3.01:0,3,50	0/0:1,0:2:2.96:0,3,19
chr10	101633839	.	GGT	G	5525.85	PASS	AB=0.855;AC=25;AF=0.446;AN=56;BaseQRankSum=5.737;DP=1006;FS=1.510;HRun=0;HaplotypeScore=148.8508;InbreedingCoeff=0.3958;MQ=52.66;MQ0=70;MQRankSum=1.620;QD=9.40;ReadPosRankSum=1.796;VQSLOD=4.6731;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,22:47:80.69:879,81,0	0/1:5,6:11:28.61:155,0,29	0/0:59,0:7:11.93:0,12,132	0/0:72,0:10:18.06:0,18,247	0/0:10,0:21:35.98:0,36,310	0/1:22,2:25:24.45:24,0,500	0/1:39,6:45:99:132,0,774	1/1:17,16:33:8.99:480,9,0	0/0:34,2:36:40.57:0,41,1052	0/0:32,0:32:57.19:0,57,875	0/0:20,0:21:7.46:0,7,528	0/0:11,0:39:71.48:0,71,632	0/0:17,0:40:68.97:0,69,648	0/0:12,0:20:44.99:0,45,402	0/1:37,6:45:64.29:64,0,1228	1/1:10,21:31:57.16:659,57,0	0/1:33,2:34:0.76:1,0,957	0/0:34,2:38:11.86:0,12,1009	1/1:15,9:18:35.77:375,36,0	0/1:10,16:25:4.73:388,0,5	1/1:42,35:78:71.35:1273,71,0	0/0:35,2:37:10.72:0,11,1006	0/1:30,2:32:3.11:3,0,831	0/1:55,3:58:8.79:9,0,1404	0/1:23,3:28:12.21:12,0,688	1/1:15,15:31:59.79:642,60,0	1/1:7,13:18:26.91:291,27,0	1/1:1,5:6:12.04:139,12,0
chr10	101650857	.	TA	T	746.17	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.388;DP=576;FS=5.655;HRun=2;HaplotypeScore=77.1439;InbreedingCoeff=0.9866;MQ=87.97;MQ0=0;MQRankSum=-5.705;QD=10.66;ReadPosRankSum=3.219;VQSLOD=1.9004;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:24,11:35:56.22:387,56,0	1/1:7,2:9:17.53:109,18,0	0/0:19,0:19:46.53:0,47,729	0/0:23,0:23:69.22:0,69,1002	0/0:27,0:27:78.26:0,78,1161	0/0:19,0:19:57.18:0,57,827	0/0:27,0:27:78.26:0,78,1169	0/0:39,0:39:99:0,111,1611	0/0:21,0:21:63.20:0,63,924	0/0:12,0:12:36.12:0,36,517	0/0:17,0:17:48.14:0,48,682	0/0:22,0:22:66.22:0,66,989	0/0:17,0:17:51.17:0,51,761	0/0:16,0:16:48.16:0,48,719	0/0:27,0:27:81.27:0,81,1211	1/1:7,2:9:18.21:138,18,0	0/0:27,0:27:81.27:0,81,1214	1/1:12,5:17:40.12:271,40,0	0/0:26,0:26:72.24:0,72,1076	0/0:20,0:20:60.20:0,60,897	0/0:25,0:25:72.23:0,72,1058	0/0:12,0:12:36.12:0,36,540	0/0:12,0:12:33.11:0,33,495	0/0:25,0:25:75.25:0,75,1120	0/0:21,0:21:60.20:0,60,899	0/0:24,0:24:72.23:0,72,1060	0/0:24,0:24:69.22:0,69,1015	0/0:4,0:4:12.04:0,12,180
chr10	101650861	.	G	GA	1286.61	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.810;DP=581;FS=0.521;HRun=0;HaplotypeScore=76.2218;InbreedingCoeff=0.9897;MQ=87.79;MQ0=0;MQRankSum=-6.238;QD=18.65;ReadPosRankSum=2.077;VQSLOD=5.5821;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,11:34:74.44:634,74,0	1/1:8,2:10:26.07:229,26,0	0/0:18,0:18:47.75:0,48,638	0/0:24,0:24:69.13:0,69,892	0/0:29,0:29:87.26:0,87,1178	0/0:19,0:19:51.15:0,51,679	0/0:27,0:27:81.27:0,81,1131	0/0:38,0:38:99:0,108,1465	0/0:22,0:22:66.21:0,66,903	0/0:11,0:11:30.10:0,30,419	0/0:18,0:18:51.16:0,51,696	0/0:22,0:22:66.22:0,66,921	0/0:16,0:16:48.14:0,48,649	0/0:17,0:17:51.15:0,51,695	0/0:29,0:29:84.27:0,84,1159	1/1:6,2:8:23.14:210,23,0	0/0:29,0:29:87.24:0,87,1177	1/1:12,5:17:24.69:374,25,0	0/0:23,0:23:69.23:0,69,958	0/0:22,0:22:60.19:0,60,818	0/0:26,0:26:78.23:0,78,1068	0/0:13,0:13:36.10:0,36,484	0/0:12,0:12:33.11:0,33,461	0/0:23,0:23:69.23:0,69,965	0/0:22,0:22:66.21:0,66,904	0/0:26,0:26:78.24:0,78,1057	0/0:22,0:22:66.22:0,66,919	0/0:4,0:4:12.04:0,12,168
chr10	101652921	.	GCAAA	G	4982.45	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.439;DP=735;FS=8.042;HRun=0;HaplotypeScore=125.1406;InbreedingCoeff=0.9925;MQ=74.43;MQ0=4;MQRankSum=-0.712;QD=36.64;ReadPosRankSum=3.643;VQSLOD=4.4142;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:92.29:0,92,2058	0/0:8,0:8:18.06:0,18,435	0/0:36,0:29:49.62:0,50,1081	0/0:29,0:27:22.20:0,22,718	1/1:5,30:35:87.26:1438,87,0	0/0:11,0:11:30.10:0,30,723	0/0:33,0:33:84.27:0,84,1975	0/0:15,0:15:30.09:0,30,634	0/0:26,0:26:63.20:0,63,1503	0/0:32,0:32:66.22:0,66,1554	0/0:23,0:23:51.17:0,51,1253	1/1:6,30:36:78.27:1317,78,0	1/1:5,22:27:66.23:1114,66,0	1/1:11,27:38:66.23:1114,66,0	0/0:26,0:26:60.21:0,60,1400	0/0:24,0:24:66.23:0,66,1613	0/0:39,0:39:99:0,105,2462	0/0:25,0:25:69.22:0,69,1650	0/0:28,0:27:51.17:0,51,1140	0/0:22,1:23:15.58:0,16,1452	0/0:21,0:21:54.16:0,54,1236	0/0:21,0:21:57.18:0,57,1358	0/0:21,0:21:48.08:0,48,1079	0/0:46,0:46:99:0,117,2771	0/0:23,0:23:57.18:0,57,1349	0/0:27,0:27:60.21:0,60,1461	0/0:13,0:13:36.08:0,36,755	0/0:10,0:10:30.06:0,30,688
chr10	101654586	.	A	AT	3823.40	PASS	AB=0.750;AC=14;AF=0.250;AN=56;BaseQRankSum=-2.022;DP=484;FS=2.285;HRun=9;HaplotypeScore=48.3850;InbreedingCoeff=0.8229;MQ=69.36;MQ0=0;MQRankSum=-1.174;QD=24.35;ReadPosRankSum=-2.014;VQSLOD=3.7004;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:21:0,21,182	0/0:4,0:4:12:0,12,104	0/0:8,0:8:17.97:0,18,149	0/0:7,0:7:5.97:0,6,50	0/0:30,0:31:86.02:0,86,735	0/0:28,0:28:83.96:0,84,725	0/0:12,0:12:29.99:0,30,260	1/1:5,30:35:87.68:951,88,0	0/0:10,0:10:29.99:0,30,260	0/0:17,0:17:41.97:0,42,364	0/0:26,0:26:74.95:0,75,646	0/0:16,0:16:41.99:0,42,365	0/0:19,0:19:53.98:0,54,469	0/0:15,0:15:38.99:0,39,339	0/0:20,0:20:59.99:0,60,521	0/0:13,0:13:35.99:0,36,313	0/0:14,0:14:38.99:0,39,339	0/0:25,0:25:57.87:0,58,497	1/1:4,11:15:33.09:365,33,0	1/1:4,28:32:35.08:831,35,0	1/1:1,8:9:24.06:266,24,0	0/1:8,1:9:9.22:9,0,156	0/0:19,0:21:53:0,53,449	0/0:16,0:16:41.96:0,42,360	0/0:18,0:18:53.97:0,54,464	0/1:7,14:21:3.98:416,0,4	1/1:3,19:22:54.13:587,54,0	1/1:2,12:14:36.10:398,36,0
chr10	101656585	.	G	GGTGT	6166.58	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=1.069;DP=720;FS=5.261;HRun=0;HaplotypeScore=134.4651;InbreedingCoeff=0.6143;MQ=53.01;MQ0=17;MQRankSum=-6.852;QD=17.27;ReadPosRankSum=-3.129;VQSLOD=3.6558;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:40:5.91:31,6,0	1/1:2,0:8:3.01:48,3,0	0/0:38,0:12:2.28:0,2,69	0/0:39,0:12:17.87:0,18,173	0/1:23,0:23:57.77:58,0,164	0/0:22,0:22:53.54:0,54,849	0/0:27,0:27:56.86:0,57,909	1/1:19,16:36:57.40:696,57,0	0/0:30,0:30:67.47:0,67,1090	0/0:31,0:30:75.08:0,75,1184	0/0:17,0:16:39.12:0,39,629	0/1:22,0:22:99:268,0,139	0/1:21,0:20:64.53:175,0,65	0/1:24,0:23:44.73:204,0,45	0/0:25,0:25:60.20:0,60,989	1/1:13,0:24:20.82:271,21,0	0/0:28,0:28:69.22:0,69,1076	1/1:14,0:22:28.70:315,29,0	1/1:10,19:28:62.42:1000,62,0	1/1:7,13:21:27.09:643,27,0	1/1:16,11:29:2.08:371,2,0	0/0:21,0:22:50.88:0,51,756	0/0:20,0:20:57.19:0,57,922	0/0:42,0:42:99:0,105,1605	0/0:22,0:22:57.19:0,57,938	1/1:13,17:31:64.39:1166,64,0	1/1:8,11:18:24.08:577,24,0	1/1:2,4:6:15.05:344,15,0
chr10	101656602	.	A	ATGTGTG	4003.86	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=6.837;DP=744;FS=2.518;HRun=0;HaplotypeScore=159.9244;InbreedingCoeff=0.6179;MQ=52.58;MQ0=15;MQRankSum=-5.020;QD=15.34;ReadPosRankSum=3.575;VQSLOD=3.3142;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:38:19.45:141,19,0	1/1:7,0:8:6:100,6,0	0/0:40,0:13:6.72:0,7,288	0/0:48,0:22:24.22:0,24,491	1/1:6,13:22:8.97:238,9,0	0/0:26,0:26:56.37:0,56,1012	0/0:23,0:23:51.15:0,51,1012	0/0:35,0:35:21.64:0,22,611	0/0:33,0:33:78.11:0,78,1396	0/0:47,0:46:99:0,116,2058	0/0:18,0:18:42.13:0,42,800	1/1:6,21:29:36.12:1073,36,0	1/1:6,10:15:18.06:595,18,0	1/1:6,14:20:27.56:896,28,0	0/0:23,0:23:51.14:0,51,984	1/1:10,0:15:20.53:413,21,0	0/0:28,0:32:62.94:0,63,1103	1/1:18,3:21:24.17:456,24,0	0/0:29,0:28:7.13:0,7,436	0/1:19,0:19:5.52:18,0,6	0/1:24,0:24:3.61:4,0,176	0/0:27,0:28:41.28:0,41,1184	0/0:21,0:22:48.15:0,48,931	0/0:45,0:47:90.28:0,90,1709	0/0:30,0:30:58.36:0,58,1431	0/1:26,0:24:50.04:50,0,211	0/1:16,0:15:8.37:8,0,152	0/1:6,0:6:12.69:13,0,22
chr10	101657006	.	TA	T	1780.73	PASS	AB=0.773;AC=32;AF=0.571;AN=56;BaseQRankSum=6.068;DP=412;FS=6.823;HRun=14;HaplotypeScore=53.2173;InbreedingCoeff=0.3264;MQ=69.33;MQ0=1;MQRankSum=-0.575;QD=6.25;ReadPosRankSum=2.174;VQSLOD=1.9985;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:4,12:18:18.89:158,0,19	0/1:2,4:6:14.57:32,0,15	0/1:8,0:6:8.35:8,0,57	0/1:8,1:8:9.02:9,0,43	1/1:13,5:19:16.60:123,17,0	0/1:10,2:13:11.32:11,0,173	0/0:10,2:12:3.42:0,3,167	1/1:10,12:22:4.71:175,5,0	0/0:14,0:15:29.79:0,30,249	0/1:15,4:19:39.35:39,0,89	0/0:17,0:18:25.38:0,25,237	0/1:4,6:10:10.02:85,0,10	1/1:2,9:13:24.87:156,25,0	1/1:1,0:14:24.44:70,24,0	0/0:23,1:24:37.32:0,37,464	1/1:3,7:11:2.67:109,3,0	0/0:13,1:15:18.54:0,19,296	1/1:3,0:9:8.10:23,8,0	1/1:5,6:11:3.54:118,4,0	1/1:12,12:23:20.56:143,21,0	1/1:0,1:1:2.98:21,3,0	0/0:11,0:13:26.82:0,27,229	0/1:16,5:21:28.73:29,0,183	0/0:8,0:8:17.93:0,18,148	0/0:22,0:22:35.98:0,36,314	1/1:4,19:24:52.53:355,53,0	1/1:9,12:24:20.10:183,20,0	1/1:1,8:9:17.84:123,18,0
chr10	101657872	.	TA	T	2221.57	PASS	AB=0.871;AC=22;AF=0.393;AN=56;BaseQRankSum=7.034;DP=556;FS=2.976;HRun=13;HaplotypeScore=66.1760;InbreedingCoeff=0.5419;MQ=84.13;MQ0=1;MQRankSum=-0.168;QD=7.88;ReadPosRankSum=2.279;VQSLOD=2.8260;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,34:41:77.98:656,78,0	1/1:0,5:6:16.95:115,17,0	0/1:24,2:22:22.06:22,0,81	0/0:23,0:19:8.99:0,9,79	1/1:3,19:25:62.62:423,63,0	0/0:16,1:17:15.91:0,16,292	0/0:20,0:21:41.88:0,42,387	0/0:20,0:22:31.23:0,31,392	0/0:20,3:23:4.42:0,4,359	0/1:15,6:21:60.84:61,0,253	0/0:19,1:20:29.18:0,29,444	1/1:3,15:18:38.04:283,38,0	1/1:2,13:17:36.87:252,37,0	1/1:5,11:16:17.88:131,18,0	0/0:15,0:15:33.04:0,33,315	1/1:3,11:14:29.83:219,30,0	0/0:21,0:22:41.82:0,42,433	1/1:3,13:17:31.85:225,32,0	0/1:20,3:25:16.96:17,0,305	0/0:22,1:24:40.75:0,41,501	0/0:12,0:12:1.39:0,1,151	0/1:14,2:16:4.75:5,0,282	0/1:16,3:20:1.92:2,0,290	0/1:17,3:20:10.54:11,0,364	0/0:14,1:17:35.73:0,36,320	0/0:24,0:24:50.42:0,50,462	0/0:25,0:25:66:0,66,626	0/0:8,0:8:20.93:0,21,191
chr10	101658126	.	GTGGGGT	G	2028.16	PASS	AB=1.000;AC=16;AF=0.296;AN=54;BaseQRankSum=2.545;DP=530;FS=1.880;HRun=0;HaplotypeScore=116.7301;InbreedingCoeff=0.7713;MQ=63.74;MQ0=25;MQRankSum=-2.693;QD=13.00;ReadPosRankSum=-0.004;VQSLOD=2.7484;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:78.31:1354,78,0	./.	0/0:37,0:19:54.14:0,54,1005	0/0:35,0:22:28.29:0,28,777	1/1:0,16:16:8.90:59,9,0	0/0:21,0:20:55.54:0,56,1350	0/0:22,0:21:63.22:0,63,1577	0/0:34,0:34:72.32:0,72,767	0/0:15,0:15:42.09:0,42,911	0/0:16,0:14:42.14:0,42,1086	0/0:12,0:11:23.88:0,24,406	1/1:0,16:18:6.02:118,6,0	1/1:1,16:18:9.50:165,9,0	1/1:1,6:8:6.02:128,6,0	0/1:13,0:12:29.57:30,0,593	1/1:1,0:14:9.02:147,9,0	0/0:31,0:31:85.81:0,86,2027	1/1:4,15:18:12.01:205,12,0	0/1:14,0:12:2.41:2,0,231	0/0:15,0:13:14.84:0,15,147	0/0:23,0:21:42.31:0,42,523	0/0:13,0:11:33.11:0,33,899	0/0:9,0:9:24.08:0,24,570	0/0:28,0:28:72.02:0,72,1781	0/0:19,0:18:51.17:0,51,1437	0/0:19,0:18:53.17:0,53,438	0/0:13,0:12:32.75:0,33,469	0/0:11,0:10:23.40:0,23,194
chr10	101658127	.	TGG	T	2312.81	PASS	AB=0.982;AC=26;AF=0.500;AN=52;BaseQRankSum=2.470;DP=533;FS=6.515;HRun=4;HaplotypeScore=86.9398;InbreedingCoeff=0.6617;MQ=63.50;MQ0=27;MQRankSum=0.989;QD=7.98;ReadPosRankSum=-1.341;VQSLOD=-0.6312;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:66.69:399,67,0	./.	0/0:36,0:19:37.28:0,37,327	0/1:35,0:22:20.10:20,0,152	./.	0/0:21,0:20:47.38:0,47,511	0/0:22,0:21:62.97:0,63,606	1/1:33,0:33:65.64:689,66,0	0/0:15,0:15:33.24:0,33,299	0/0:16,0:14:35.96:0,36,396	0/0:12,0:11:20.37:0,20,144	1/1:18,0:18:5.27:25,5,0	0/1:18,0:18:2.90:20,0,3	1/1:8,0:8:5.77:31,6,0	0/1:13,0:12:29.95:30,0,192	1/1:13,0:14:8.51:41,9,0	0/0:32,0:32:43.17:0,43,712	1/1:19,0:18:11.24:57,11,0	1/1:2,12:12:35.71:263,36,0	1/1:5,10:13:4.37:28,4,0	1/1:23,0:20:18.03:186,18,0	0/0:15,0:12:35.97:0,36,346	0/0:9,0:9:23.98:0,24,238	0/0:28,0:28:56.19:0,56,683	0/0:19,0:18:43.04:0,43,572	1/1:19,0:18:34.61:382,35,0	0/1:12,1:12:6.57:132,0,7	1/1:12,0:11:27.22:208,27,0
chr10	101658130	.	G	GT	298.15	PASS	AB=0.915;AC=9;AF=0.167;AN=54;BaseQRankSum=7.120;DP=542;FS=1.337;HRun=0;HaplotypeScore=93.9865;InbreedingCoeff=0.5033;MQ=59.94;MQ0=28;MQRankSum=0.164;QD=2.42;ReadPosRankSum=-0.314;VQSLOD=2.4978;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:35:52.34:256,52,0	./.	0/0:33,0:15:33.52:0,34,434	0/0:34,0:21:53.03:0,53,532	0/0:16,0:16:0:0,0,0	0/0:22,0:21:49.66:0,50,573	0/0:23,0:22:63.13:0,63,788	0/0:30,0:30:78.05:0,78,379	0/0:15,0:16:41.92:0,42,474	0/0:16,0:14:39.12:0,39,507	0/0:13,0:12:17.99:0,18,207	0/0:18,0:18:4.04:0,4,15	0/0:18,0:18:7.36:0,7,32	0/0:7,0:7:2.22:0,2,7	0/0:11,0:12:16.02:0,16,272	0/1:15,0:15:5.45:22,0,5	0/0:32,0:34:65.53:0,66,996	1/1:21,0:20:0.23:59,0,0	0/0:17,0:15:28.19:0,28,143	1/1:16,0:14:8.74:63,9,0	0/1:22,1:20:1.45:1,0,96	0/0:15,0:12:35.59:0,36,420	0/0:11,0:11:22.31:0,22,278	0/0:28,0:29:69.17:0,69,868	0/0:19,0:18:50.81:0,51,613	0/0:22,0:21:20.42:0,20,164	0/1:8,3:10:31.59:32,0,37	0/0:12,0:11:25.05:0,25,123
chr10	101658264	.	T	TC	12981.23	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-8.698;DP=654;FS=4.965;HRun=1;HaplotypeScore=75.3894;InbreedingCoeff=0.9946;MQ=93.01;MQ0=0;MQRankSum=-4.289;QD=39.70;ReadPosRankSum=1.896;VQSLOD=5.6084;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,34:37:90.22:1297,90,0	1/1:1,11:12:33.58:495,34,0	0/0:32,0:32:90.29:0,90,1166	0/0:33,0:33:96.24:0,96,1185	1/1:1,33:34:84.28:1259,84,0	0/0:19,0:19:57.19:0,57,740	0/0:25,0:25:69.22:0,69,896	1/1:1,28:28:81.25:1154,81,0	0/0:26,0:26:72.23:0,72,933	0/0:40,0:40:99:0,117,1519	0/0:17,0:17:39.13:0,39,506	1/1:1,23:24:66.18:963,66,0	1/1:1,24:24:66.22:981,66,0	1/1:0,12:12:27.05:378,27,0	0/0:19,0:19:38.98:0,39,505	1/1:0,16:16:45.15:673,45,0	0/0:32,0:32:81.26:0,81,1051	1/1:2,17:19:12.23:680,12,0	1/1:0,12:12:36.10:519,36,0	1/1:1,21:22:63.21:944,63,0	1/1:0,27:27:75.25:1124,75,0	0/0:27,0:26:66.21:0,66,854	0/0:16,0:16:48.14:0,48,609	0/0:28,0:28:75.24:0,75,973	0/0:13,0:13:36.12:0,36,467	1/1:0,22:22:63.19:919,63,0	1/1:1,29:30:90.26:1326,90,0	1/1:0,6:6:18.06:270,18,0
chr10	101658520	.	TC	T	258.05	PASS	AC=18;AF=1.000;AN=18;DP=19;FS=0.000;HRun=3;HaplotypeScore=5.6445;MQ=49.93;MQ0=2;QD=19.85;VQSLOD=2.7087;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:3.01:36,3,0	./.	./.	./.	./.	1/1:1,0:1:3.01:33,3,0	./.	./.	1/1:0,1:1:3.01:33,3,0	./.	1/1:0,1:1:3.01:33,3,0	./.	1/1:3,0:3:9:79,9,0	1/1:1,0:1:3:25,3,0	./.	./.	./.	1/1:1,0:1:2.99:24,3,0	./.	1/1:0,2:1:3.01:33,3,0	./.	./.	./.	./.	1/1:1,0:1:3.01:34,3,0	./.	./.	./.
chr10	101660231	.	T	TA	5879.37	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-14.919;DP=598;FS=9.522;HRun=7;HaplotypeScore=54.1187;InbreedingCoeff=0.9988;MQ=70.34;MQ0=1;MQRankSum=-0.977;QD=30.62;ReadPosRankSum=-0.048;VQSLOD=4.7507;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:33.05:0,33,317	0/0:9,0:9:27.02:0,27,254	0/0:13,0:12:21.08:0,21,276	0/0:11,0:11:29.89:0,30,268	0/0:23,0:23:69.11:0,69,666	0/0:25,0:25:66.06:0,66,621	0/0:18,0:18:51.07:0,51,488	1/1:5,28:33:81.24:967,81,0	0/0:13,0:13:36.05:0,36,343	0/0:31,0:31:84.11:0,84,803	0/0:30,0:30:87.13:0,87,836	0/0:14,0:14:33.05:0,33,319	0/0:16,0:16:45.07:0,45,434	0/0:19,0:19:42.04:0,42,395	0/0:25,0:25:63.09:0,63,608	0/0:17,0:17:51.06:0,51,483	0/0:23,0:23:63.10:0,63,608	0/0:27,0:27:77.01:0,77,701	1/1:1,13:14:39.12:471,39,0	1/1:0,40:40:99:1342,114,0	1/1:3,17:20:51.16:616,51,0	0/0:25,0:25:69.11:0,69,666	0/0:20,0:20:54.07:0,54,516	0/0:13,0:13:36.01:0,36,329	0/0:21,0:21:57.07:0,57,540	1/1:2,35:37:99:1215,105,0	1/1:2,31:32:69.21:833,69,0	1/1:2,13:15:36.11:435,36,0
chr10	101661321	.	CT	C	12260.95	PASS	AB=0.532;AC=29;AF=0.518;AN=56;BaseQRankSum=19.972;DP=700;FS=3.274;HRun=2;HaplotypeScore=97.3339;InbreedingCoeff=0.9194;MQ=81.01;MQ0=0;MQRankSum=-4.686;QD=34.93;ReadPosRankSum=1.530;VQSLOD=5.1020;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,48:48:99:1752,135,0	1/1:0,7:7:18.06:234,18,0	0/0:16,0:16:48.16:0,48,704	0/0:25,0:25:68.83:0,69,948	1/1:0,22:22:60.20:779,60,0	0/0:24,0:24:72.24:0,72,1079	0/0:38,0:38:99:0,114,1686	1/1:0,30:30:90.23:1110,90,0	0/0:33,0:33:93.32:0,93,1393	0/0:22,0:22:66.21:0,66,957	0/0:15,0:15:39.12:0,39,564	1/1:0,33:33:90.29:1168,90,0	1/1:3,29:32:78.13:956,78,0	1/1:1,22:23:54.13:682,54,0	0/0:42,0:42:99:0,123,1765	1/1:0,37:37:99:1382,108,0	0/0:37,0:37:99:0,108,1570	1/1:0,12:12:33.11:428,33,0	1/1:2,14:16:45.13:568,45,0	1/1:0,21:21:54.18:701,54,0	1/1:0,17:17:51.17:662,51,0	0/0:20,0:20:60.20:0,60,899	0/0:14,0:14:42.14:0,42,629	0/0:45,0:45:99:0,135,1951	0/0:18,0:18:54.18:0,54,809	0/1:3,22:25:59.70:752,0,60	1/1:0,25:25:75.24:971,75,0	1/1:0,3:3:9.03:117,9,0
chr10	101661520	.	GA	G	1179.03	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=10.275;DP=261;FS=33.713;HRun=2;HaplotypeScore=62.5636;InbreedingCoeff=0.7729;MQ=65.51;MQ0=1;MQRankSum=-9.434;QD=10.82;ReadPosRankSum=-1.105;VQSLOD=-0.2219;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,5:6:15.01:136,15,0	1/1:1,3:4:9:82,9,0	0/1:5,0:5:9.65:10,0,121	0/0:6,0:4:3.20:0,3,45	1/1:4,3:7:9.02:99,9,0	0/0:13,0:13:39.11:0,39,543	0/0:7,0:7:21.07:0,21,315	1/1:5,3:8:9.01:82,9,0	0/0:21,0:21:63.21:0,63,943	0/0:15,0:15:42.13:0,42,593	0/0:11,0:11:33.11:0,33,495	1/1:3,3:6:9:79,9,0	1/1:6,4:10:14.93:121,15,0	1/1:3,3:6:9:79,9,0	0/0:15,0:15:42.14:0,42,624	1/1:3,6:9:18:158,18,0	0/0:17,0:16:48.16:0,48,719	1/1:2,4:6:9.01:83,9,0	1/1:6,1:7:3.01:39,3,0	1/1:4,4:8:11.99:104,12,0	1/1:3,3:4:3:26,3,0	0/0:10,0:10:27.09:0,27,405	0/0:9,0:9:27.09:0,27,405	0/0:12,0:12:33.07:0,33,495	0/0:16,0:16:48.15:0,48,697	1/1:4,3:7:9.01:93,9,0	1/1:7,6:13:17.99:158,18,0	1/1:0,1:1:3.01:39,3,0
chr10	101661525	.	TA	T	828.88	PASS	AC=26;AF=0.500;AN=52;BaseQRankSum=10.121;DP=202;FS=42.455;HRun=1;HaplotypeScore=62.6046;InbreedingCoeff=0.8422;MQ=73.63;MQ0=1;MQRankSum=-9.292;QD=16.92;ReadPosRankSum=-1.606;VQSLOD=1.1341;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:14.94:114,15,0	1/1:0,3:3:8.96:69,9,0	0/0:4,0:3:3:0,3,26	0/0:9,0:7:3.78:0,4,44	1/1:0,3:3:8.48:47,8,0	0/0:12,0:12:36.12:0,36,575	0/0:7,0:7:21.07:0,21,326	1/1:0,3:3:8.98:72,9,0	0/0:18,0:18:54.17:0,54,820	0/0:14,0:14:42.14:0,42,662	0/0:11,0:11:33.11:0,33,518	1/1:0,3:3:8.97:69,9,0	1/1:0,4:4:11.96:93,12,0	1/1:0,3:3:8.97:69,9,0	0/0:13,0:13:39.11:0,39,580	1/1:0,6:6:17.93:137,18,0	0/0:17,0:16:48.16:0,48,766	1/1:0,4:4:8.99:73,9,0	./.	1/1:0,4:4:11.96:92,12,0	1/1:2,1:1:2.99:23,3,0	0/0:9,0:9:27.09:0,27,432	0/0:8,0:8:24.08:0,24,374	0/0:11,0:11:30.07:0,30,436	0/0:20,0:20:57.19:0,57,901	1/1:0,2:2:5.98:46,6,0	1/1:0,6:6:17.45:127,17,0	./.
chr10	101661561	.	T	TAG	180.17	PASS	AB=1.000;AC=11;AF=0.289;AN=38;BaseQRankSum=-0.250;DP=192;FS=4.995;HRun=0;HaplotypeScore=58.8916;InbreedingCoeff=0.0836;MQ=65.19;MQ0=5;MQRankSum=-1.781;QD=2.14;ReadPosRankSum=-3.783;VQSLOD=0.1703;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:6:3.01:0,3,31	1/1:6,0:3:2.04:6,2,0	0/0:15,0:8:4.16:0,4,38	./.	0/0:17,0:17:44.78:0,45,219	0/1:5,0:5:5.93:31,0,6	0/0:3,0:4:10.89:0,11,48	0/1:8,0:8:2.63:3,0,64	0/0:12,0:11:27.08:0,27,367	0/0:3,0:3:9.03:0,9,135	./.	./.	0/0:5,0:5:1.25:0,1,3	0/1:8,0:8:0.57:1,0,61	./.	0/1:17,0:16:11.84:12,0,133	1/1:3,4:7:9.03:138,9,0	./.	./.	./.	0/0:4,0:4:7.98:0,8,36	0/0:10,0:10:0.97:0,1,71	0/0:4,0:4:8.23:0,8,36	0/1:29,0:29:83.26:83,0,184	0/1:1,0:1:0:0,0,0	0/1:3,0:2:13.99:16,0,14	./.
chr10	101661579	.	TAG	T	164.41	PASS	AB=0.720;AC=9;AF=0.196;AN=46;BaseQRankSum=1.910;DP=184;FS=28.415;HRun=0;HaplotypeScore=47.6356;InbreedingCoeff=0.4103;MQ=50.53;MQ0=5;MQRankSum=-3.317;QD=4.33;ReadPosRankSum=-3.183;VQSLOD=0.0143;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:4,3:7:1.82:5,2,0	0/0:3,0:1:3:0,3,29	0/0:9,0:4:4.83:0,5,46	./.	0/0:16,0:16:42.07:0,42,708	0/0:4,0:4:9.03:0,9,142	0/1:10,4:11:51.97:116,0,52	0/0:8,0:8:21.07:0,21,374	0/0:13,0:13:33.11:0,33,547	0/0:4,0:4:12.03:0,12,199	0/0:1,0:1:0:0,0,0	0/0:0,1:1:0:0,0,0	0/1:2,5:7:0.03:0,0,1	0/0:5,0:5:15.05:0,15,275	./.	0/0:13,0:12:30.10:0,30,575	0/0:6,0:6:6.02:0,6,92	0/1:3,1:4:25.36:37,0,25	0/0:0,2:2:0:0,0,0	./.	0/0:3,0:3:9.03:0,9,158	0/0:9,0:9:27.08:0,27,487	0/0:3,0:3:9.03:0,9,173	0/0:24,0:24:72.25:0,72,1374	1/1:0,4:4:8.78:77,9,0	1/1:2,0:1:5.38:44,5,0	./.
chr10	101661631	.	TAC	T	412.58	PASS	AB=0.852;AC=23;AF=0.548;AN=42;BaseQRankSum=3.860;DP=339;FS=1.375;HRun=0;HaplotypeScore=51.0247;InbreedingCoeff=0.0566;MQ=52.25;MQ0=9;MQRankSum=0.075;QD=2.75;ReadPosRankSum=-0.877;VQSLOD=1.5115;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	0/1:17,1:19:28.60:29,0,157	0/0:14,0:14:3.01:0,3,42	./.	0/1:11,2:13:20.35:20,0,121	0/0:16,0:15:6.02:0,6,89	0/1:11,1:12:14.34:14,0,204	1/1:3,0:5:1.89:15,2,0	1/1:2,0:3:2.56:16,3,0	1/1:8,0:10:4.28:30,4,0	0/1:14,1:15:8.33:8,0,267	1/1:3,0:9:2.50:9,2,0	0/0:15,0:15:9:0,9,110	1/1:2,0:4:2.44:14,2,0	./.	0/1:8,2:10:35.54:56,0,36	1/1:9,3:12:6.01:65,6,0	0/0:7,0:7:9.02:0,9,114	0/0:12,0:12:6.02:0,6,88	0/1:8,1:8:23.46:23,0,52	0/0:18,0:18:15.05:0,15,221	1/1:12,2:14:11.97:124,12,0	1/1:6,2:7:7.83:70,8,0	0/1:2,1:6:27.41:60,0,27
chr10	101662542	.	G	GCCTC	8350.64	PASS	AB=0.560;AC=13;AF=0.232;AN=56;BaseQRankSum=-4.614;DP=549;FS=17.738;HRun=0;HaplotypeScore=103.1829;InbreedingCoeff=0.8930;MQ=80.09;MQ0=0;MQRankSum=-8.066;QD=56.81;ReadPosRankSum=-3.632;VQSLOD=3.6885;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.22:0,63,1159	0/0:8,0:8:24.08:0,24,442	0/0:18,0:18:39.09:0,39,650	0/0:30,0:30:67.19:0,67,1200	0/0:18,0:18:51.17:0,51,938	0/0:24,0:24:60.20:0,60,1104	0/0:29,0:28:87.30:0,87,1580	1/1:10,23:33:84.29:2168,84,0	0/0:24,0:24:72.25:0,72,1325	0/0:17,0:17:48.15:0,48,853	0/0:14,0:14:33.10:0,33,577	0/0:23,0:23:69.24:0,69,1270	0/0:14,0:14:36.12:0,36,662	0/0:17,0:17:51.17:0,51,939	0/0:26,0:26:75.24:0,75,1350	0/0:21,0:21:63.22:0,63,1159	0/0:15,0:15:42.14:0,42,773	0/0:20,0:20:54.19:0,54,993	1/1:11,7:20:39.12:910,39,0	1/1:2,11:16:33.11:869,33,0	1/1:5,18:25:45.15:1188,45,0	0/0:10,0:10:30.10:0,30,552	0/0:22,0:22:57.20:0,57,1042	0/0:12,0:12:36.12:0,36,662	0/0:16,0:16:39.13:0,39,717	0/1:6,20:28:35.19:1663,0,35	1/1:2,16:18:48.16:1237,48,0	1/1:1,6:7:12.04:315,12,0
chr10	101663016	.	G	GAAAA	5371.59	PASS	AB=0.610;AC=29;AF=0.518;AN=56;BaseQRankSum=9.814;DP=565;FS=12.109;HRun=11;HaplotypeScore=119.0646;InbreedingCoeff=0.8994;MQ=54.10;MQ0=6;MQRankSum=-11.283;QD=19.46;ReadPosRankSum=-5.626;VQSLOD=0.4510;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:28:48.15:589,48,0	1/1:1,0:8:14.85:185,15,0	0/0:9,0:7:17.99:0,18,194	0/0:12,0:8:11.50:0,11,139	1/1:9,0:25:36.21:224,36,0	0/0:15,0:15:36.04:0,36,490	0/0:22,0:24:60.01:0,60,738	1/1:19,15:37:53.72:927,54,0	0/0:18,0:19:25.41:0,25,501	0/0:30,0:30:63.02:0,63,842	0/0:20,0:20:51.06:0,51,670	1/1:8,0:15:26.45:164,26,0	1/1:5,0:19:40.45:249,40,0	1/1:8,0:17:38.28:242,38,0	0/0:20,0:22:43.27:0,43,574	1/1:10,0:17:41.95:419,42,0	0/0:27,0:27:63.06:0,63,834	1/1:10,0:21:29.42:197,29,0	1/1:5,12:18:41.66:568,42,0	1/1:2,14:17:21.07:425,21,0	1/1:2,2:6:6.01:87,6,0	0/0:26,0:26:50.06:0,50,747	0/0:24,0:24:48.89:0,49,653	0/0:23,0:25:53.22:0,53,678	0/0:32,0:32:71.94:0,72,927	0/1:9,15:25:11.51:703,0,12	1/1:0,8:14:8.92:166,9,0	1/1:4,0:5:14.96:227,15,0
chr10	101663257	.	GA	G	12117.85	PASS	AB=0.522;AC=29;AF=0.518;AN=56;BaseQRankSum=15.089;DP=683;FS=13.370;HRun=2;HaplotypeScore=73.8790;InbreedingCoeff=0.9247;MQ=84.00;MQ0=0;MQRankSum=-3.901;QD=33.38;ReadPosRankSum=3.228;VQSLOD=4.0293;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,55:56:99:2043,159,0	1/1:0,10:10:27.09:350,27,0	0/0:28,0:27:81.25:0,81,1147	0/0:26,0:26:71.82:0,72,898	1/1:1,21:21:45.10:559,45,0	0/0:22,0:22:66.19:0,66,959	0/0:25,0:25:69.23:0,69,1033	1/1:1,26:27:72.22:919,72,0	0/0:22,0:22:63.16:0,63,899	0/0:26,0:26:78.26:0,78,1151	0/0:17,0:17:51.15:0,51,725	1/1:0,25:25:57.19:739,57,0	1/1:0,24:24:60.20:778,60,0	1/1:0,26:26:69.22:895,69,0	0/0:35,0:35:99:0,105,1510	1/1:0,25:25:66.21:857,66,0	0/0:33,0:33:99:0,99,1461	1/1:0,23:23:60.20:779,60,0	1/1:1,21:22:63.16:776,63,0	1/1:0,22:22:60.08:739,60,0	1/1:0,26:26:72.23:935,72,0	0/0:25,0:25:66.21:0,66,963	0/0:21,0:21:57.18:0,57,831	0/0:18,0:18:54.17:0,54,789	0/0:22,0:22:63.19:0,63,904	0/1:2,22:24:20.77:702,0,21	1/1:0,25:25:69.22:892,69,0	1/1:0,6:6:12.04:156,12,0
chr10	101663920	.	TACACACACACACATAC	T	2266.67	PASS	AB=0.891;AC=16;AF=0.286;AN=56;BaseQRankSum=6.329;DP=655;FS=5.875;HRun=0;HaplotypeScore=268.5028;InbreedingCoeff=0.5557;MQ=62.11;MQ0=11;MQRankSum=-2.795;QD=8.85;ReadPosRankSum=-1.737;VQSLOD=1.7297;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:34.76:0,35,505	0/1:8,0:8:6.48:6,0,158	0/1:47,0:29:35.04:35,0,267	0/1:40,0:31:15.07:15,0,366	0/0:14,0:14:33.03:0,33,1082	0/0:20,0:19:44.97:0,45,2128	0/0:21,0:21:48:0,48,1710	1/1:27,0:27:41.04:376,41,0	0/0:14,0:14:28.56:0,29,1302	0/0:20,0:20:35.47:0,35,1534	0/0:13,0:13:30.08:0,30,1678	0/0:27,0:27:53.65:0,54,1779	0/0:23,0:23:32.66:0,33,1248	0/0:24,0:24:32.85:0,33,1207	0/0:20,0:19:33.02:0,33,1428	0/0:29,0:28:14.20:0,14,257	0/0:28,0:28:52.27:0,52,2382	0/0:14,0:14:33.03:0,33,1221	1/1:15,1:14:5.91:251,6,0	1/1:4,14:18:6.02:270,6,0	1/1:13,38:49:3.48:136,3,0	0/0:24,0:24:53.91:0,54,2569	0/0:19,0:19:14.11:0,14,1059	0/0:32,0:32:74.93:0,75,3865	0/0:30,0:30:39.32:0,39,2480	0/1:5,17:22:99:896,0,363	1/1:8,11:19:11.07:411,11,0	1/1:6,0:6:5.96:44,6,0
chr10	101663934	.	TACAC	T	1596.94	PASS	AB=0.863;AC=20;AF=0.385;AN=52;BaseQRankSum=6.440;DP=654;FS=0.000;HRun=0;HaplotypeScore=152.2580;InbreedingCoeff=0.5561;MQ=51.51;MQ0=16;MQRankSum=-1.293;QD=5.72;ReadPosRankSum=1.197;VQSLOD=2.0257;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:25:31.27:41,0,31	0/1:5,0:7:12.94:72,0,13	./.	0/0:34,0:21:0:0,0,0	1/1:13,3:16:17.84:244,18,0	0/0:23,0:22:32.49:0,32,520	0/0:29,0:30:41.85:0,42,586	0/0:32,0:31:25.59:0,26,195	0/0:14,0:14:31.13:0,31,489	0/0:25,0:24:38.70:0,39,566	0/0:14,0:14:25.02:0,25,337	1/1:30,4:35:37.31:397,37,0	0/1:15,5:20:0.88:220,0,1	1/1:22,4:27:5.65:319,6,0	0/0:15,0:14:17.78:0,18,244	1/1:22,0:25:14.98:148,15,0	0/0:25,0:25:39.08:0,39,669	0/0:10,0:17:10.39:0,10,160	1/1:13,0:10:3:27,3,0	1/1:19,0:19:8.04:61,8,0	1/1:54,0:46:3:27,3,0	0/0:21,0:21:27.07:0,27,468	0/0:19,0:19:1.44:0,1,75	0/0:38,0:38:62.05:0,62,1182	0/0:28,0:28:33.61:0,34,501	0/1:21,0:21:79.11:136,0,79	1/1:13,0:13:9:82,9,0	./.
chr10	101663999	.	T	TACACAC	1694.24	PASS	AB=0.917;AC=12;AF=0.222;AN=54;BaseQRankSum=1.600;DP=591;FS=2.947;HRun=0;HaplotypeScore=185.5450;InbreedingCoeff=0.8121;MQ=56.43;MQ0=9;MQRankSum=-4.940;QD=13.03;ReadPosRankSum=-3.742;VQSLOD=2.6187;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:40.25:0,40,756	0/0:11,0:11:27.08:0,27,512	0/0:33,0:13:32.79:0,33,450	0/1:31,0:8:0.09:0,0,111	0/0:11,0:11:26.87:0,27,430	0/0:20,0:20:54.16:0,54,1022	0/0:30,0:30:72.19:0,72,1368	1/1:23,0:23:29.93:345,30,0	0/0:25,0:25:72.14:0,72,1347	0/0:19,0:19:51.12:0,51,918	0/0:7,0:7:17.95:0,18,323	0/0:37,0:37:83.58:0,84,1604	0/0:35,0:35:78.69:0,79,1373	0/0:29,0:29:63.08:0,63,1009	0/0:32,0:32:81.24:0,81,1655	0/0:34,0:34:81.24:0,81,1572	0/0:23,0:23:60.58:0,61,1085	0/0:5,0:5:8.89:0,9,108	1/1:14,1:16:24.05:417,24,0	0/1:8,2:10:24.65:186,0,25	1/1:23,0:24:14.77:154,15,0	0/0:16,0:16:45.05:0,45,783	0/0:12,0:12:30.04:0,30,580	0/0:34,0:34:96.26:0,96,1801	0/0:21,0:21:40.17:0,40,804	1/1:11,3:14:17.11:384,17,0	1/1:6,2:9:18.48:381,18,0	./.
chr10	101664005	.	TAC	T	3574.79	PASS	AB=0.905;AC=17;AF=0.315;AN=54;BaseQRankSum=5.977;DP=608;FS=3.159;HRun=0;HaplotypeScore=134.3461;InbreedingCoeff=0.6633;MQ=56.14;MQ0=10;MQRankSum=0.283;QD=14.83;ReadPosRankSum=2.747;VQSLOD=3.4242;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,10:25:35.77:398,36,0	1/1:4,7:11:23.85:259,24,0	0/0:35,0:13:5.95:0,6,59	0/0:31,0:10:8.08:0,8,40	1/1:8,3:11:10.01:166,10,0	0/0:17,2:19:7.15:0,7,531	0/1:23,3:26:53.81:54,0,572	0/0:24,0:24:12.92:0,13,155	0/0:25,0:25:54.15:0,54,793	0/0:21,0:21:42.13:0,42,604	0/0:7,0:7:15.04:0,15,213	1/1:19,22:41:54.81:787,55,0	1/1:15,19:34:63.13:698,63,0	1/1:17,12:29:36.09:408,36,0	0/0:36,0:36:74.53:0,75,1207	1/1:11,20:34:72.16:764,72,0	0/0:22,0:22:47.79:0,48,665	0/0:4,0:5:3:0,3,26	0/0:17,0:15:20.39:0,20,213	0/0:10,0:10:5.99:0,6,52	0/0:28,0:26:17.92:0,18,146	0/1:15,2:16:36.91:37,0,343	0/1:11,1:12:4.91:5,0,353	0/0:40,1:41:72.19:0,72,1042	0/0:21,0:21:30.17:0,30,466	0/0:15,0:14:26.96:0,27,285	0/0:9,0:9:15.01:0,15,153	./.
chr10	101664058	.	TAC	T	4328.59	PASS	AB=0.833;AC=15;AF=0.300;AN=50;BaseQRankSum=11.402;DP=518;FS=2.962;HRun=0;HaplotypeScore=97.9135;InbreedingCoeff=0.7662;MQ=61.00;MQ0=5;MQRankSum=-6.129;QD=25.31;ReadPosRankSum=-1.284;VQSLOD=5.1777;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,17:23:48.07:556,48,0	1/1:5,4:9:18.06:221,18,0	0/0:24,0:9:15.01:0,15,215	0/0:22,0:8:12.04:0,12,179	1/1:3,6:9:14.54:162,15,0	0/0:18,0:18:45.14:0,45,711	0/0:27,1:28:29.80:0,30,973	./.	0/0:27,0:27:69.19:0,69,1061	0/0:24,0:24:57.18:0,57,858	0/0:9,0:8:21.07:0,21,338	1/1:7,20:27:57.07:667,57,0	1/1:10,27:37:90.19:1057,90,0	1/1:3,22:25:16.99:672,17,0	0/0:34,0:34:87.17:0,87,1354	1/1:8,26:35:44.13:972,44,0	0/0:14,0:14:26.93:0,27,502	0/1:4,1:5:21.86:22,0,170	0/0:6,0:5:2.97:0,3,20	./.	0/0:15,0:8:3.48:0,3,36	0/0:18,0:18:39.07:0,39,634	0/0:14,0:13:32.81:0,33,526	0/0:42,3:46:35.35:0,35,1681	0/0:18,1:19:9.16:0,9,615	0/0:8,0:7:3.01:0,3,49	./.	0/0:1,0:1:3.01:0,3,38
chr10	101664107	.	TACACACACACACACACACACACACACACACAC	T	7787.43	PASS	AB=0.719;AC=9;AF=0.161;AN=56;BaseQRankSum=7.041;DP=520;FS=14.830;HRun=0;HaplotypeScore=353.1202;InbreedingCoeff=0.7039;MQ=46.62;MQ0=19;MQRankSum=-6.337;QD=69.53;ReadPosRankSum=2.167;VQSLOD=2.5180;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:1.72:0,2,3	0/0:4,0:3:3.01:0,3,38	0/0:31,0:10:30.10:0,30,1659	0/0:39,0:12:33.11:0,33,1539	1/1:7,6:12:18.53:1470,19,0	0/0:21,0:21:30.91:0,31,2825	0/0:18,0:17:30.09:0,30,1934	0/0:17,0:16:45.15:0,45,2169	0/0:27,0:27:55.02:0,55,4690	0/0:19,0:21:56.78:0,57,4332	0/0:11,0:11:21.07:0,21,1843	0/1:14,9:22:97.06:2180,0,97	1/1:19,7:26:21.06:1506,21,0	1/1:15,4:19:18.04:1046,18,0	0/0:21,0:20:30.10:0,30,2823	1/1:24,6:30:27.09:1586,27,0	0/0:25,0:27:63.21:0,63,6285	0/0:9,0:9:7.62:0,8,722	0/0:12,0:11:33.08:0,33,1434	0/0:4,0:4:6.02:0,6,555	0/0:11,0:14:12.04:0,12,1146	0/0:17,0:18:36.12:0,36,3448	0/0:14,0:16:42.14:0,42,4484	0/0:37,0:38:59.22:0,59,4903	0/0:15,0:15:27.09:0,27,2249	0/0:6,0:9:27.09:0,27,2461	0/0:7,0:6:3.65:0,4,647	0/0:1,0:2:6.02:0,6,487
chr10	101664125	.	CA	C	281.87	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=9.460;DP=539;FS=1.393;HRun=1;HaplotypeScore=102.9277;InbreedingCoeff=0.7603;MQ=47.85;MQ0=25;MQRankSum=-5.510;QD=6.26;ReadPosRankSum=4.601;VQSLOD=0.9110;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:4:2.29:0,2,12	0/0:2,0:1:3.01:0,3,37	0/0:31,0:12:36.11:0,36,455	0/0:33,0:15:42.11:0,42,512	1/1:6,1:7:14.76:55,15,0	0/0:26,0:26:60.67:0,61,800	0/0:27,0:26:66.67:0,67,843	0/0:29,0:27:79.80:0,80,984	0/0:31,0:31:81.25:0,81,1071	0/0:32,0:30:86.38:0,86,1023	0/0:15,0:14:38.02:0,38,472	0/1:10,0:10:13.37:47,0,13	1/1:8,1:8:14.77:80,15,0	1/1:8,1:7:15.33:94,15,0	0/0:20,0:19:48.63:0,49,641	1/1:8,2:9:22.75:164,23,0	0/0:33,0:33:90.07:0,90,1153	0/0:3,0:3:9.03:0,9,121	0/0:16,0:14:41.99:0,42,479	0/0:11,0:10:22.62:0,23,268	0/0:32,0:25:25.37:0,25,306	0/0:28,0:28:73.12:0,73,960	0/0:22,0:22:51.93:0,52,670	0/0:42,0:42:99:0,101,1282	0/0:15,0:15:33.10:0,33,430	0/0:23,0:22:57.28:0,57,690	0/0:14,0:13:27.09:0,27,340	0/0:4,0:4:9.91:0,10,115
chr10	101665137	.	T	TA	2668.58	PASS	AB=0.568;AC=13;AF=0.232;AN=56;BaseQRankSum=4.228;DP=507;FS=8.193;HRun=0;HaplotypeScore=97.1906;InbreedingCoeff=0.8650;MQ=69.96;MQ0=1;MQRankSum=-1.139;QD=18.79;ReadPosRankSum=-0.569;VQSLOD=5.0476;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:43.21:0,43,156	0/0:4,0:4:7.95:0,8,31	0/0:8,0:7:13.80:0,14,148	0/0:8,0:6:14.77:0,15,149	0/0:26,0:26:62.23:0,62,230	0/0:19,0:19:57.19:0,57,790	0/0:14,0:14:41.33:0,41,532	1/1:9,17:26:9.38:427,9,0	0/0:10,0:10:30.09:0,30,401	0/0:20,0:20:60.18:0,60,785	0/0:30,0:30:87.28:0,87,1189	0/0:16,0:16:33.51:0,34,116	0/0:15,0:15:37.30:0,37,133	0/0:17,0:17:35.19:0,35,136	0/0:15,0:15:45.15:0,45,622	0/0:13,0:13:14.66:0,15,72	0/0:32,0:32:87.22:0,87,1109	0/0:16,0:16:26.17:0,26,90	1/1:5,12:18:33.89:329,34,0	1/1:8,21:30:31.24:570,31,0	1/1:1,12:13:33.08:349,33,0	0/0:18,0:18:51.14:0,51,658	0/0:21,0:21:63.20:0,63,864	0/0:11,0:11:33.06:0,33,416	0/0:30,0:30:90.30:0,90,1253	0/1:6,19:25:42.46:505,0,42	1/1:5,14:19:25.76:424,26,0	1/1:1,9:11:27.19:252,27,0
chr10	101665138	.	TA	T	2590.50	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=5.578;DP=510;FS=1.318;HRun=9;HaplotypeScore=98.4243;InbreedingCoeff=0.9597;MQ=70.80;MQ0=1;MQRankSum=-0.490;QD=19.93;ReadPosRankSum=2.184;VQSLOD=3.7999;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,17:23:53.92:482,54,0	1/1:0,4:4:9:82,9,0	0/0:7,1:7:3.16:0,3,40	0/0:10,0:8:17.82:0,18,158	1/1:2,24:26:71.78:632,72,0	0/0:19,0:19:54.16:0,54,624	0/0:13,0:13:30.09:0,30,347	0/0:26,0:26:57.90:0,58,339	0/0:10,0:10:27.07:0,27,302	0/0:20,0:20:54.13:0,54,598	0/0:32,0:32:81.21:0,81,911	1/1:4,12:16:36.02:329,36,0	1/1:0,15:15:45.02:411,45,0	1/1:3,13:17:38.61:339,39,0	0/0:15,0:15:39.12:0,39,451	1/1:1,12:13:27.01:246,27,0	0/0:32,0:32:81.11:0,81,857	1/1:2,14:16:30.01:274,30,0	0/0:18,0:18:44.53:0,45,241	0/0:29,0:29:68.68:0,69,382	0/0:13,0:13:34.22:0,34,178	0/0:17,0:17:39.09:0,39,430	0/0:21,0:21:60.16:0,60,683	0/0:11,0:11:27.04:0,27,289	0/0:29,1:30:59.83:0,60,943	0/0:26,0:26:68.97:0,69,425	0/0:19,0:19:43.25:0,43,234	0/0:11,0:11:28.56:0,29,151
chr10	101665346	.	C	CTGGA	2203.89	PASS	AB=0.926;AC=13;AF=0.260;AN=50;BaseQRankSum=0.922;DP=547;FS=2.179;HRun=0;HaplotypeScore=132.3149;InbreedingCoeff=0.3527;MQ=69.79;MQ0=14;MQRankSum=-2.220;QD=9.88;ReadPosRankSum=0.416;VQSLOD=3.2856;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:84.56:85,0,122	0/0:8,0:8:11.97:0,12,125	./.	./.	0/0:16,0:15:0:0,0,0	0/0:11,0:11:21.05:0,21,298	0/0:22,0:22:18.06:0,18,266	./.	0/0:23,0:23:27.07:0,27,386	0/0:16,0:16:18.04:0,18,232	0/0:8,0:8:2.99:0,3,24	1/1:24,2:26:37.91:599,38,0	1/1:21,2:23:38.99:657,39,0	1/1:23,3:26:4.23:409,4,0	1/1:17,12:30:12.04:261,12,0	0/1:21,0:21:3.19:3,0,215	0/1:16,12:29:73.51:259,0,74	0/0:13,0:14:9.46:0,9,76	0/0:13,0:19:9.78:0,10,76	0/0:12,0:13:6.02:0,6,71	0/0:26,0:26:3:0,3,35	0/1:14,0:15:77.82:78,0,202	0/0:11,0:11:14.68:0,15,203	0/0:19,0:19:27.09:0,27,410	0/0:14,0:14:30.09:0,30,437	0/0:12,0:18:9.48:0,9,84	0/1:22,0:22:4.94:5,0,123	0/0:7,0:7:2.80:0,3,13
chr10	101665348	.	G	GGCT	961.65	PASS	AB=0.976;AC=9;AF=0.161;AN=56;BaseQRankSum=11.180;DP=541;FS=0.000;HRun=0;HaplotypeScore=120.5550;InbreedingCoeff=0.0801;MQ=66.60;MQ0=14;MQRankSum=-4.136;QD=5.94;ReadPosRankSum=3.216;VQSLOD=2.5609;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,3:29:66.28:249,0,66	0/1:8,0:8:9.96:10,0,181	0/0:34,0:27:78.21:0,78,1270	0/0:22,0:11:30.03:0,30,434	1/1:16,0:15:8.67:79,9,0	0/0:11,0:11:33.10:0,33,538	0/0:23,0:23:63.18:0,63,1036	0/0:17,0:15:42.14:0,42,733	0/0:22,0:22:60.21:0,60,1050	0/0:15,0:15:36.12:0,36,608	0/0:8,0:8:21.07:0,21,370	0/1:26,1:27:19.75:163,0,20	0/1:22,0:23:12.68:148,0,13	0/1:25,0:25:22.09:154,0,22	0/0:31,0:31:46.41:0,46,768	0/1:20,0:20:99:202,0,329	0/0:31,0:31:44.25:0,44,811	0/1:13,0:13:11.39:99,0,11	0/0:19,0:18:42.10:0,42,663	0/0:12,0:12:36.12:0,36,614	0/0:26,0:26:44.86:0,45,686	0/0:15,0:15:39.06:0,39,625	0/0:12,0:12:23.30:0,23,422	0/0:22,0:22:63.19:0,63,1053	0/0:12,0:12:33.11:0,33,555	0/0:19,0:18:42.11:0,42,601	0/0:21,0:21:63.16:0,63,1033	0/0:7,0:7:20.86:0,21,323
chr10	101665432	.	AGATGGATG	A	4836.69	PASS	AB=0.667;AC=15;AF=0.268;AN=56;BaseQRankSum=12.128;DP=671;FS=20.238;HRun=0;HaplotypeScore=165.1432;InbreedingCoeff=0.9026;MQ=56.84;MQ0=5;MQRankSum=-9.505;QD=28.28;ReadPosRankSum=4.638;VQSLOD=2.6079;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,26:32:21.07:525,21,0	1/1:2,7:9:14.92:330,15,0	0/0:35,0:12:26.99:0,27,560	0/0:39,0:32:41.27:0,41,1404	1/1:1,27:28:45.02:837,45,0	0/0:22,0:22:57.14:0,57,1987	0/0:26,0:26:63.14:0,63,1869	0/0:29,0:29:54.14:0,54,1164	0/0:26,0:26:78.23:0,78,2719	0/0:22,0:22:60.19:0,60,2188	0/0:18,0:18:51.13:0,51,1568	1/1:7,20:27:18.13:827,18,0	1/1:1,18:19:24.08:608,24,0	1/1:2,22:24:30.10:788,30,0	0/0:28,0:28:78.27:0,78,2995	1/1:4,16:20:24.08:630,24,0	0/0:24,0:24:60.18:0,60,2003	0/1:6,6:12:37.37:292,0,37	0/0:19,0:18:42.10:0,42,1274	0/0:20,0:20:54.16:0,54,1809	0/0:46,0:46:99:0,110,3097	0/0:16,0:16:42.14:0,42,1393	0/0:17,0:16:36.07:0,36,1114	0/0:26,0:26:66.13:0,66,2065	0/0:27,0:27:69.16:0,69,2426	0/0:26,0:26:69.21:0,69,2466	0/0:25,0:25:69.20:0,69,2115	0/0:9,0:9:27.08:0,27,946
chr10	101666011	.	C	CTTT	2604.99	PASS	AB=0.612;AC=25;AF=0.446;AN=56;BaseQRankSum=8.570;DP=558;FS=0.000;HRun=11;HaplotypeScore=98.3162;InbreedingCoeff=0.5673;MQ=64.05;MQ0=0;MQRankSum=-0.044;QD=7.73;ReadPosRankSum=-3.032;VQSLOD=-0.6664;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:35:23.29:63,23,0	1/1:2,0:9:7.48:16,7,0	0/1:9,0:9:13.06:13,0,98	0/0:4,0:5:11.90:0,12,101	1/1:3,14:21:51.02:733,51,0	0/0:18,0:18:48.09:0,48,551	0/0:14,0:14:26.99:0,27,311	0/1:8,0:31:1.55:108,0,2	0/0:17,0:17:32.97:0,33,385	0/0:16,0:16:36.02:0,36,420	0/0:26,0:27:58.30:0,58,685	1/1:3,10:13:21.07:378,21,0	1/1:7,22:30:38.16:644,38,0	1/1:7,17:25:30.09:547,30,0	0/0:18,0:18:40.98:0,41,478	0/1:5,0:26:19.16:19,0,74	0/0:22,0:24:59.95:0,60,653	1/1:3,0:16:12.46:27,12,0	1/1:4,0:16:19.23:90,19,0	0/1:5,0:28:0.71:77,0,1	0/1:1,0:8:4.21:4,0,26	0/0:20,0:22:50.92:0,51,549	0/0:15,0:17:37.32:0,37,422	0/0:23,0:23:50.97:0,51,578	0/0:18,0:20:37.42:0,37,436	1/1:1,0:21:25.77:62,26,0	0/1:4,0:31:13.19:13,0,36	0/1:2,0:18:14.44:14,0,21
chr10	101666176	.	C	CGGGGGGT	5188.25	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-4.648;DP=586;FS=0.000;HRun=0;HaplotypeScore=133.2211;InbreedingCoeff=0.9608;MQ=89.09;MQ0=0;MQRankSum=-10.677;QD=64.85;ReadPosRankSum=0.870;VQSLOD=4.8762;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:84.27:0,84,1858	0/0:3,0:3:6.02:0,6,144	0/0:25,0:25:56.89:0,57,1023	0/0:26,0:26:48.16:0,48,1045	1/1:4,13:23:36.12:1348,36,0	0/0:25,0:25:63.22:0,63,1511	0/0:19,0:19:54.17:0,54,1243	0/0:23,0:23:45.15:0,45,891	0/0:19,0:19:48.16:0,48,1050	0/0:14,0:14:39.13:0,39,914	0/0:26,0:25:75.26:0,75,1747	1/1:4,10:17:36.12:1357,36,0	1/1:0,11:14:20.53:798,21,0	1/1:3,16:19:39.13:1484,39,0	0/0:24,0:24:69.24:0,69,1602	0/0:33,0:33:87.24:0,87,1941	0/0:27,0:27:63.19:0,63,1438	1/1:7,0:7:8.96:201,9,0	0/0:24,0:24:51.17:0,51,1222	0/0:19,0:19:48.12:0,48,1097	0/0:23,0:23:60.21:0,60,1437	0/0:26,0:26:60.18:0,60,1321	0/0:16,0:16:42.14:0,42,953	0/0:25,0:25:60.20:0,60,1411	0/0:17,0:17:33.11:0,33,759	0/0:17,0:17:42.14:0,42,952	0/0:32,0:32:90.31:0,90,2146	0/0:10,0:10:30.10:0,30,686
chr10	101667350	.	TTGTGTGTGTGTGTGTG	T	889.07	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=4.505;DP=564;FS=5.497;HRun=0;HaplotypeScore=222.5306;InbreedingCoeff=0.8188;MQ=59.01;MQ0=18;MQRankSum=-3.970;QD=14.34;ReadPosRankSum=1.400;VQSLOD=2.2482;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:36:36.12:0,36,1941	0/0:5,0:5:9.03:0,9,427	0/0:29,0:23:24.40:0,24,720	0/0:20,0:13:21.04:0,21,610	./.	0/0:14,0:14:24.08:0,24,1487	0/0:19,0:18:36.08:0,36,1734	0/0:31,0:29:42.60:0,43,1837	0/0:24,0:24:45.16:0,45,2434	0/0:28,0:28:52.96:0,53,2791	0/0:17,0:17:21.96:0,22,1192	1/1:7,13:21:9.03:388,9,0	1/1:15,0:15:6.02:187,6,0	1/1:7,12:19:9.03:386,9,0	0/0:20,0:20:39.13:0,39,2199	0/0:21,0:21:34.45:0,34,2130	0/0:21,0:19:27.06:0,27,1565	1/1:4,0:4:3.01:60,3,0	0/0:22,0:21:36.12:0,36,1674	0/0:25,0:25:17.87:0,18,496	0/0:17,0:15:9.03:0,9,461	0/0:24,0:23:34:0,34,1764	0/0:16,0:16:21.06:0,21,1063	0/0:36,0:35:52.74:0,53,3010	0/0:12,0:12:9.92:0,10,450	0/0:29,0:28:57.20:0,57,2717	0/0:14,0:11:18.04:0,18,577	0/0:5,0:4:12.04:0,12,527
chr10	101667371	.	TGTGTGTGTGTGTGTGTGAGAGA	T	1029.60	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=3.841;DP=527;FS=4.308;HRun=0;HaplotypeScore=239.7418;InbreedingCoeff=0.6925;MQ=44.65;MQ0=26;MQRankSum=-4.884;QD=16.09;ReadPosRankSum=0.710;VQSLOD=2.5588;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:35:32.97:0,33,2539	0/0:3,0:3:9.03:0,9,427	0/0:18,0:12:24.40:0,24,719	0/0:13,0:7:21.04:0,21,610	./.	0/0:20,0:19:32.22:0,32,1691	0/0:16,0:15:36.08:0,36,1734	0/0:25,0:23:60.29:0,60,2310	0/0:24,0:24:46.49:0,46,2573	0/0:19,0:19:55.97:0,56,2999	0/0:19,0:18:24.55:0,25,1403	1/1:19,0:19:7.25:385,7,0	1/1:8,8:15:7.44:283,7,0	1/1:19,0:18:8.63:443,9,0	0/0:17,0:17:51.18:0,51,2839	0/0:19,0:19:37.48:0,37,2476	0/0:25,0:20:9.16:0,9,2963	0/1:10,0:6:47.42:47,0,191	0/0:21,0:20:54.17:0,54,2189	0/0:26,0:26:17.97:0,18,497	0/0:11,0:8:9.03:0,9,461	0/0:20,0:19:33.58:0,34,1803	0/0:18,0:18:24.54:0,25,1240	0/0:42,0:35:65.49:0,65,3971	0/0:14,0:14:18.53:0,19,894	0/0:24,0:22:63.15:0,63,3035	0/0:15,0:12:22.61:0,23,649	0/0:7,0:4:12.04:0,12,544
chr10	101667387	.	TGAGAGAGA	T	890.50	PASS	AB=0.948;AC=13;AF=0.283;AN=46;BaseQRankSum=1.486;DP=480;FS=8.922;HRun=0;HaplotypeScore=143.5160;InbreedingCoeff=0.2367;MQ=42.47;MQ0=26;MQRankSum=0.025;QD=4.79;ReadPosRankSum=-0.092;VQSLOD=1.9305;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:34:15.65:0,16,421	0/0:2,0:2:0:0,0,0	./.	./.	./.	0/1:19,0:19:3.31:212,0,3	0/1:21,0:20:14.62:15,0,182	./.	0/0:19,0:18:6.49:0,6,111	0/0:14,0:14:13.32:0,13,104	0/0:18,0:17:10.78:0,11,99	0/0:19,0:19:1.81:0,2,5	1/1:14,0:14:6.02:105,6,0	1/1:21,0:20:8.74:146,9,0	0/1:20,0:19:47.15:47,0,197	0/0:23,0:23:18.71:0,19,437	0/0:25,0:21:12.34:0,12,432	0/0:9,0:5:6.02:0,6,125	1/1:11,0:10:3.01:64,3,0	0/0:15,4:19:0.47:0,0,1	./.	0/0:18,0:17:2.98:0,3,21	0/0:14,0:17:6.01:0,6,83	0/1:45,0:39:99:99,0,512	0/0:13,0:13:8.82:0,9,108	0/1:14,2:15:41.20:197,0,41	1/1:9,5:11:5.85:142,6,0	0/0:6,0:2:3.01:0,3,51
chr10	101668835	.	G	GA	1025.54	PASS	AB=0.933;AC=7;AF=0.125;AN=56;BaseQRankSum=-7.957;DP=444;FS=1.475;HRun=7;HaplotypeScore=38.9487;InbreedingCoeff=0.7822;MQ=71.40;MQ0=0;MQRankSum=0.585;QD=20.51;ReadPosRankSum=1.842;VQSLOD=2.8098;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:60.18:725,60,0	1/1:0,4:4:12.04:145,12,0	0/0:9,0:9:21.02:0,21,197	0/0:4,0:4:12.02:0,12,115	0/0:20,0:20:57.08:0,57,545	0/0:15,0:15:39.06:0,39,377	0/0:19,0:19:57.09:0,57,551	0/0:31,0:31:81.11:0,81,779	0/1:13,1:14:9.20:9,0,205	0/0:19,0:19:51.07:0,51,488	0/0:21,0:21:60.10:0,60,579	0/0:21,0:21:57.07:0,57,539	0/0:21,0:21:60.10:0,60,579	0/0:10,0:10:27.04:0,27,261	0/0:13,0:13:36.06:0,36,348	1/1:1,9:10:24.07:290,24,0	0/0:15,0:15:39.06:0,39,377	0/0:20,0:20:57.09:0,57,550	0/0:19,0:19:45.07:0,45,435	0/0:30,0:30:69.08:0,69,660	0/0:11,0:11:30.05:0,30,290	0/0:7,0:7:21.03:0,21,203	0/0:18,0:18:48.04:0,48,452	0/0:7,0:7:21.03:0,21,203	0/0:16,0:16:39.05:0,39,371	0/0:21,0:21:57.07:0,57,546	0/0:26,0:26:69.03:0,69,650	0/0:1,0:1:3:0,3,29
chr10	101669553	.	A	AACACACACAC	8821.23	PASS	AB=0.559;AC=11;AF=0.196;AN=56;BaseQRankSum=10.903;DP=660;FS=4.916;HRun=0;HaplotypeScore=211.3509;InbreedingCoeff=0.9089;MQ=65.60;MQ0=3;MQRankSum=-10.799;QD=53.14;ReadPosRankSum=-4.107;VQSLOD=3.7968;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:27:38.86:313,39,0	0/1:4,0:19:4.12:4,0,92	0/0:31,0:26:27.09:0,27,681	0/0:23,0:17:17.54:0,18,453	1/1:21,6:27:27.54:1109,28,0	0/0:28,0:28:75.26:0,75,2260	0/0:16,0:16:36.07:0,36,908	0/0:42,0:42:81.23:0,81,1972	0/0:17,0:17:39.12:0,39,1114	0/0:28,0:28:60.19:0,60,1690	0/0:18,0:18:33.11:0,33,926	1/1:11,10:22:42.12:1902,42,0	1/1:26,12:38:66.23:3062,66,0	1/1:19,13:33:60.14:2431,60,0	0/0:22,0:22:60.18:0,60,1671	0/0:7,0:26:34.21:0,34,253	0/0:26,0:26:57.18:0,57,1639	0/0:2,0:10:18.06:0,18,419	0/0:16,0:17:36.11:0,36,1013	0/0:29,0:29:75.22:0,75,1890	0/0:19,0:19:51.17:0,51,1523	0/0:8,0:8:15.04:0,15,394	0/0:18,0:18:45.13:0,45,1200	0/0:11,0:11:24.07:0,24,563	0/0:14,0:14:36.12:0,36,1064	0/0:26,0:26:63.20:0,63,1866	0/0:40,0:40:96.25:0,96,2383	0/0:24,0:24:60.18:0,60,1774
chr10	101669848	.	CAGA	C	2284.54	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.098;DP=665;FS=1.853;HRun=0;HaplotypeScore=100.3395;InbreedingCoeff=0.9964;MQ=87.44;MQ0=0;MQRankSum=-5.768;QD=37.45;ReadPosRankSum=2.561;VQSLOD=4.5737;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:48.16:799,48,0	1/1:0,9:9:27.09:450,27,0	0/0:19,0:19:51.18:0,51,1129	0/0:28,0:28:81.23:0,81,1744	0/0:31,0:31:87.26:0,87,1906	0/0:38,0:38:99:0,105,2362	0/0:25,0:25:75.26:0,75,1668	0/0:32,0:32:93.31:0,93,2044	0/0:18,0:18:54.19:0,54,1222	0/0:26,0:26:78.27:0,78,1759	0/0:21,0:21:60.19:0,60,1317	0/0:34,0:34:99:0,99,2201	0/0:31,0:31:93.32:0,93,2108	0/0:22,0:22:66.23:0,66,1495	0/0:23,0:23:69.24:0,69,1563	1/1:4,28:32:72.24:1178,72,0	0/0:24,0:24:72.25:0,72,1632	0/0:7,0:7:18.04:0,18,363	0/0:16,0:16:48.16:0,48,1062	0/0:31,0:31:93.29:0,93,2016	0/0:18,0:18:54.19:0,54,1224	0/0:17,0:17:48.16:0,48,1083	0/0:16,0:16:42.14:0,42,934	0/0:29,0:29:84.29:0,84,1882	0/0:27,0:26:81.28:0,81,1799	0/0:28,0:28:84.29:0,84,1892	0/0:34,0:34:99:0,99,2224	0/0:9,0:9:27.09:0,27,612
chr10	101669948	.	CT	C	2939.04	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.366;DP=636;FS=1.394;HRun=3;HaplotypeScore=56.9621;InbreedingCoeff=0.9987;MQ=78.40;MQ0=0;MQRankSum=-0.340;QD=30.94;ReadPosRankSum=2.209;VQSLOD=3.6399;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.22:0,66,944	0/0:8,0:8:24.08:0,24,346	0/0:12,0:12:24.07:0,24,320	0/0:20,0:20:57.19:0,57,801	1/1:0,23:23:66.14:794,66,0	0/0:34,0:34:99:0,99,1411	0/0:22,0:22:66.21:0,66,926	0/0:34,0:34:96.30:0,96,1348	0/0:25,0:25:75.25:0,75,1078	0/0:33,0:33:99:0,99,1378	0/0:21,0:20:60.20:0,60,863	1/1:1,23:24:57.18:707,57,0	1/1:0,24:24:66.21:818,66,0	1/1:0,24:24:63.20:781,63,0	0/0:23,0:23:69.23:0,69,992	0/0:28,0:28:84.23:0,84,1139	0/0:14,0:14:42.11:0,42,581	0/0:12,0:12:36.12:0,36,518	0/0:25,0:25:69.23:0,69,987	0/0:27,0:27:78.26:0,78,1122	0/0:21,0:21:60.19:0,60,843	0/0:22,0:22:63.21:0,63,904	0/0:25,0:25:75.23:0,75,1044	0/0:18,0:18:54.14:0,54,754	0/0:23,0:23:69.23:0,69,988	0/0:28,0:28:81.27:0,81,1166	0/0:33,0:33:96.32:0,96,1382	0/0:11,0:11:33.11:0,33,475
chr10	101670504	.	TG	T	3489.78	PASS	AB=0.917;AC=19;AF=0.339;AN=56;BaseQRankSum=0.477;DP=654;FS=18.667;HRun=10;HaplotypeScore=106.5028;InbreedingCoeff=0.5972;MQ=67.10;MQ0=0;MQRankSum=-0.648;QD=11.40;ReadPosRankSum=4.835;VQSLOD=1.4646;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:26:40.72:119,41,0	1/1:0,0:11:20.37:60,20,0	0/1:24,0:23:7.79:8,0,287	0/0:23,0:22:27.32:0,27,450	1/1:5,34:39:98.87:859,99,0	0/1:16,2:18:15.97:16,0,296	0/0:20,1:21:22.08:0,22,429	0/0:25,0:25:7.19:0,7,124	0/0:21,1:23:30.89:0,31,525	0/0:25,0:25:27.07:0,27,298	0/0:9,0:9:12.02:0,12,125	1/1:3,28:31:80.96:703,81,0	1/1:7,26:33:83.86:725,84,0	1/1:2,34:36:92.84:797,93,0	0/0:15,1:16:10.04:0,10,338	1/1:1,0:22:40.74:120,41,0	0/1:24,4:28:49.21:49,0,396	0/0:7,0:9:18:0,18,128	0/0:26,0:27:39.53:0,40,164	0/0:15,0:15:28.74:0,29,110	0/0:31,0:31:46.86:0,47,190	0/1:16,2:18:28.05:28,0,175	0/0:21,1:22:13.01:0,13,350	0/0:22,1:23:28.02:0,28,488	0/1:18,2:20:7:7,0,348	0/0:36,0:36:34:0,34,206	0/0:29,0:29:60.71:0,61,234	0/0:14,0:14:29.54:0,30,107
chr10	101670505	.	G	GT	7712.46	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-5.234;DP=650;FS=12.499;HRun=1;HaplotypeScore=100.7947;InbreedingCoeff=0.9930;MQ=68.06;MQ0=0;MQRankSum=1.018;QD=24.10;ReadPosRankSum=2.298;VQSLOD=3.6914;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:40.24:0,40,387	0/0:11,0:11:29.56:0,30,192	0/0:24,0:23:56.06:0,56,629	0/0:24,0:23:62.54:0,63,613	1/1:39,0:39:99:641,112,0	0/0:18,0:18:44.77:0,45,515	0/0:21,0:21:31.14:0,31,628	1/1:1,26:27:72.13:895,72,0	0/0:22,0:22:53.78:0,54,692	0/0:23,0:23:47.95:0,48,549	0/0:9,0:9:21.02:0,21,227	1/1:31,0:31:83.92:476,84,0	1/1:34,0:34:96.17:576,96,0	1/1:36,0:36:93.65:510,94,0	0/0:18,0:18:41.95:0,42,518	0/0:22,0:22:62.12:0,62,410	0/0:26,0:26:69.38:0,69,734	0/0:8,0:8:10.75:0,11,105	1/1:3,24:28:76.10:874,76,0	1/1:1,14:15:39.04:496,39,0	1/1:5,27:32:49.44:661,49,0	0/0:16,0:16:26.74:0,27,296	0/0:20,0:20:47.94:0,48,565	0/0:22,0:22:59.94:0,60,678	0/0:20,0:20:24.92:0,25,515	1/1:2,34:36:54.35:1073,54,0	1/1:5,23:28:76.61:1016,77,0	1/1:1,13:14:36.11:493,36,0
chr10	101671425	.	T	TGTAATAAATTGTGTCTCCTGTAATACGCACA	102091.70	PASS	AB=0.950;AC=29;AF=0.518;AN=56;BaseQRankSum=13.241;DP=730;FS=5.737;HRun=0;HaplotypeScore=546.3259;InbreedingCoeff=0.9183;MQ=83.05;MQ0=0;MQRankSum=-21.532;QD=259.78;ReadPosRankSum=3.517;VQSLOD=3.5232;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,1:37:87.30:8493,87,0	1/1:17,2:19:54.19:6533,54,0	0/0:32,0:32:93.32:0,93,4622	0/0:26,0:26:69.21:0,69,3267	1/1:30,1:32:81.28:8178,81,0	0/0:34,0:34:99:0,99,6620	0/0:26,0:26:72.25:0,72,4459	1/1:57,0:57:99:10605,169,0	0/0:30,0:30:87.30:0,87,5841	0/0:20,0:20:57.18:0,57,3513	0/0:23,0:23:69.24:0,69,4861	1/1:15,1:16:39.13:3918,39,0	1/1:25,5:31:81.28:8168,81,0	1/1:33,0:34:96.33:9798,96,0	0/0:29,0:29:84.27:0,84,5369	1/1:20,3:24:63.22:6618,63,0	0/0:22,0:22:66.23:0,66,4419	1/1:12,1:13:33.11:3399,33,0	1/1:10,1:12:36.12:3485,36,0	1/1:32,1:33:87.26:7698,87,0	1/1:9,0:9:15.01:1350,15,0	0/0:25,0:25:75.26:0,75,4648	0/0:25,0:25:75.26:0,75,5746	0/0:18,0:18:45.15:0,45,2815	0/0:27,0:27:81.28:0,81,5971	0/1:36,1:38:99:10960,0,204	1/1:32,1:35:96.33:11661,96,0	1/1:1,2:3:9.03:1227,9,0
chr10	101671636	.	C	CAA	4775.77	PASS	AB=0.795;AC=20;AF=0.357;AN=56;BaseQRankSum=-4.321;DP=553;FS=0.373;HRun=11;HaplotypeScore=90.7770;InbreedingCoeff=0.8884;MQ=72.68;MQ0=0;MQRankSum=-0.132;QD=22.42;ReadPosRankSum=-4.289;VQSLOD=3.4948;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:28:52.84:486,53,0	1/1:1,9:12:30.09:405,30,0	0/1:20,0:17:0.47:0,0,181	0/0:15,0:15:26.57:0,27,218	0/0:4,0:31:68.57:0,69,296	0/0:23,0:24:50.95:0,51,544	0/0:17,0:19:32.53:0,33,410	1/1:4,20:26:59.16:773,59,0	0/0:16,0:16:29.87:0,30,334	0/0:20,0:24:23.50:0,24,360	0/0:22,0:25:50.45:0,50,459	0/0:3,0:15:30.43:0,30,148	0/0:2,0:18:46.06:0,46,196	0/0:2,0:14:38.42:0,38,166	0/0:16,0:21:26.93:0,27,311	1/1:0,12:13:33.11:463,33,0	0/0:13,0:13:36.05:0,36,346	0/0:1,0:18:43.91:0,44,190	1/1:2,7:11:26.53:316,27,0	1/1:4,15:21:47.53:578,48,0	1/1:1,7:8:10.85:135,11,0	0/0:19,0:23:15.46:0,15,367	0/0:24,1:28:34.38:0,34,657	0/0:12,0:12:36.06:0,36,349	0/0:22,0:24:17.80:0,18,385	1/1:4,24:30:52.10:914,52,0	1/1:7,22:31:37.32:486,37,0	0/1:4,8:13:5.10:218,0,5
chr10	101672012	.	A	AT	1474.40	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-4.012;DP=543;FS=3.308;HRun=9;HaplotypeScore=66.0326;InbreedingCoeff=0.9940;MQ=83.10;MQ0=0;MQRankSum=0.390;QD=21.68;ReadPosRankSum=0.262;VQSLOD=4.4588;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:89.94:0,90,781	0/0:11,0:11:32.99:0,33,286	0/0:24,0:24:47.97:0,48,415	0/0:16,0:16:35:0,35,292	1/1:2,22:24:56.94:573,57,0	0/0:26,1:27:35.26:0,35,515	0/0:25,0:25:48.05:0,48,520	0/0:19,0:19:53.99:0,54,469	0/0:18,1:19:20.79:0,21,404	0/0:21,0:21:59.97:0,60,517	0/0:18,0:19:50.02:0,50,423	1/1:2,14:16:36.10:398,36,0	1/1:4,13:17:33.09:365,33,0	1/1:1,10:11:27.07:299,27,0	0/0:19,0:19:41.98:0,42,365	0/0:23,0:23:50.97:0,51,443	0/0:16,0:16:35.96:0,36,308	0/0:8,0:8:24:0,24,208	0/0:22,0:22:15.96:0,16,312	0/0:14,0:14:38.99:0,39,339	0/0:27,0:27:68.98:0,69,599	0/0:19,0:19:44.97:0,45,390	0/0:19,0:19:50.99:0,51,442	0/0:18,0:18:47.98:0,48,417	0/0:18,0:18:47.98:0,48,414	0/0:22,0:22:62.99:0,63,547	0/0:16,0:16:47.99:0,48,417	0/0:17,0:17:41.95:0,42,358
chr10	101672064	.	CTG	C	211.56	PASS	AB=0.972;AC=9;AF=0.161;AN=56;BaseQRankSum=1.520;DP=457;FS=0.000;HRun=0;HaplotypeScore=78.1851;InbreedingCoeff=0.6039;MQ=88.23;MQ0=0;MQRankSum=-1.010;QD=2.61;ReadPosRankSum=-1.330;VQSLOD=1.6033;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:89.66:0,90,770	0/0:20,0:20:56.89:0,57,483	0/0:25,0:25:65.95:0,66,808	0/0:19,0:19:23.49:0,23,325	1/1:16,2:18:16.71:131,17,0	0/0:23,0:23:45.01:0,45,667	0/0:18,0:18:47.99:0,48,660	0/0:18,0:18:33:0,33,311	0/0:17,0:17:40.63:0,41,570	0/0:12,0:12:24.04:0,24,267	0/0:20,0:20:32.88:0,33,349	0/1:10,1:11:7.17:29,0,7	1/1:8,2:10:12:105,12,0	1/1:11,3:14:11.27:70,11,0	0/0:21,0:21:48.03:0,48,720	0/0:22,0:22:62.76:0,63,556	0/0:14,0:14:29.77:0,30,492	0/1:12,0:12:12.43:19,0,12	0/1:16,0:16:5.80:6,0,168	0/0:12,0:12:15:0,15,162	0/0:12,0:12:23.74:0,24,229	0/0:12,0:12:23.89:0,24,218	0/0:21,0:21:38.80:0,39,503	0/0:16,0:16:39.51:0,40,584	0/0:12,0:12:23.89:0,24,252	0/0:15,0:15:12.01:0,12,108	0/0:13,0:13:20.83:0,21,169	0/0:3,0:3:6:0,6,66
chr10	101672067	.	T	TG	1306.56	PASS	AB=0.901;AC=22;AF=0.393;AN=56;BaseQRankSum=6.566;DP=448;FS=13.404;HRun=11;HaplotypeScore=90.9750;InbreedingCoeff=0.6587;MQ=90.05;MQ0=0;MQRankSum=-1.244;QD=6.73;ReadPosRankSum=-1.680;VQSLOD=0.4720;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:83.44:448,83,0	1/1:18,0:18:40.27:218,40,0	0/0:27,0:27:29.70:0,30,235	0/0:19,0:19:20.92:0,21,139	0/1:16,0:16:0:0,0,0	0/0:21,0:22:37.81:0,38,284	0/0:19,0:21:31.88:0,32,238	1/1:19,0:19:5.68:41,6,0	0/0:17,0:17:31.86:0,32,233	0/0:11,0:11:5.95:0,6,46	0/0:16,0:17:13.95:0,14,97	1/1:10,0:10:2.87:25,3,0	0/0:11,0:11:2.12:0,2,7	0/0:9,1:10:2.06:0,2,5	0/0:20,0:21:40.81:0,41,305	1/1:22,0:23:56.95:300,57,0	0/0:14,0:14:26.79:0,27,209	1/1:11,0:11:8.72:65,9,0	0/1:7,4:12:19.23:41,0,19	1/1:8,3:13:11.96:97,12,0	1/1:10,3:13:22.07:168,22,0	0/0:11,0:12:11:0,11,75	0/0:17,0:19:24.93:0,25,173	0/0:18,0:19:25.87:0,26,192	0/0:14,0:14:8.78:0,9,66	0/1:8,1:9:0:0,0,0	1/1:12,0:12:7.76:53,8,0	0/1:4,0:4:14.24:38,0,14
chr10	101672076	.	G	GA	2172.19	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.690;DP=427;FS=15.930;HRun=0;HaplotypeScore=59.3996;InbreedingCoeff=0.9438;MQ=85.50;MQ0=0;MQRankSum=-4.422;QD=28.21;ReadPosRankSum=7.654;VQSLOD=2.4635;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:87.25:1059,87,0	1/1:0,14:15:41.95:515,42,0	0/0:24,0:24:61.59:0,62,637	0/0:15,0:15:31.88:0,32,341	0/0:14,0:14:10.93:0,11,87	0/0:25,0:25:68.97:0,69,769	0/0:17,0:17:45.05:0,45,541	0/0:14,0:14:22.89:0,23,224	0/0:18,0:18:50.97:0,51,573	0/0:11,0:11:24.01:0,24,240	0/0:10,0:10:23.95:0,24,257	0/0:10,0:10:24.88:0,25,209	0/0:11,0:11:26.93:0,27,221	0/0:12,0:12:29.61:0,30,232	0/0:21,0:21:59.86:0,60,701	1/1:1,21:23:60.15:741,60,0	0/0:17,0:17:42:0,42,501	0/0:8,0:8:16.60:0,17,115	0/0:13,0:13:35.22:0,35,251	0/0:12,0:12:18.68:0,19,141	0/0:13,0:13:18.80:0,19,146	0/0:9,0:9:17.97:0,18,195	0/0:20,0:20:41.88:0,42,445	0/0:16,0:16:47.93:0,48,527	0/0:16,0:16:38.84:0,39,376	0/0:9,0:9:17.94:0,18,147	0/0:10,0:10:21.45:0,21,178	0/0:5,0:5:8.14:0,8,89
chr10	101672955	.	A	AC	5644.45	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=2.238;DP=731;FS=1.572;HRun=1;HaplotypeScore=77.3306;InbreedingCoeff=0.9962;MQ=54.63;MQ0=9;MQRankSum=-6.484;QD=36.42;ReadPosRankSum=0.845;VQSLOD=5.2534;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:54.18:799,54,0	1/1:0,10:10:21.02:284,21,0	0/0:29,0:18:54.17:0,54,693	0/0:22,0:8:24.07:0,24,293	1/1:1,29:30:78.25:1129,78,0	0/0:26,0:26:78.25:0,78,1010	0/0:23,0:23:69.20:0,69,867	0/0:35,0:33:90.26:0,90,1150	0/0:21,1:22:15.43:0,15,695	0/0:31,0:30:87.26:0,87,1096	0/0:25,0:24:72.16:0,72,872	1/1:0,21:21:54.18:801,54,0	1/1:2,14:16:39.06:555,39,0	1/1:0,32:32:84.28:1251,84,0	0/0:24,0:24:69.22:0,69,896	1/1:0,21:21:56.95:825,57,0	0/0:30,0:30:90.24:0,90,1134	0/0:25,1:26:72.20:0,72,916	0/0:32,0:29:84.24:0,84,1052	0/0:30,0:29:87.26:0,87,1104	0/0:22,0:22:66.20:0,66,842	0/0:26,0:26:78.19:0,78,952	0/0:32,0:31:93.27:0,93,1169	0/0:31,1:32:48.58:0,49,1108	0/0:36,0:36:99:0,108,1338	0/0:38,0:38:99:0,114,1429	0/0:23,0:23:69.20:0,69,867	0/0:12,0:12:36.12:0,36,467
chr10	101674316	.	A	AAACTG	4929.98	PASS	AB=0.545;AC=5;AF=0.089;AN=56;BaseQRankSum=0.733;DP=715;FS=0.523;HRun=0;HaplotypeScore=137.7233;InbreedingCoeff=0.8574;MQ=84.08;MQ0=0;MQRankSum=-10.501;QD=79.52;ReadPosRankSum=-0.900;VQSLOD=5.9228;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:33:84.29:2679,84,0	1/1:1,4:5:15.05:470,15,0	0/0:23,0:23:60.19:0,60,1168	0/0:25,0:25:63.17:0,63,1262	0/0:32,0:32:96.33:0,96,2079	0/0:18,0:18:51.17:0,51,1120	0/0:29,0:29:87.30:0,87,1872	0/0:32,0:32:90.30:0,90,1915	0/0:21,0:21:60.20:0,60,1310	0/0:25,0:25:75.24:0,75,1536	0/0:26,0:26:72.23:0,72,1539	0/0:29,0:29:87.30:0,87,1895	0/0:27,0:27:78.25:0,78,1653	0/0:26,0:26:78.27:0,78,1713	0/0:29,0:29:87.28:0,87,1850	0/1:4,20:24:2.73:1782,0,3	0/0:34,0:34:99:0,99,2175	0/0:15,0:15:42.12:0,42,920	0/0:27,0:27:81.28:0,81,1762	0/0:32,0:32:93.32:0,93,1993	0/0:29,0:29:84.29:0,84,1833	0/0:34,0:34:90.29:0,90,1899	0/0:21,0:21:63.22:0,63,1351	0/0:23,0:23:69.21:0,69,1449	0/0:23,0:23:66.20:0,66,1406	0/0:30,0:30:90.30:0,90,1891	0/0:33,0:33:99:0,99,2092	0/0:10,0:10:24.08:0,24,515
chr10	101674523	.	TC	T	2115.55	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.406;DP=709;FS=6.509;HRun=2;HaplotypeScore=90.0662;InbreedingCoeff=0.9624;MQ=87.98;MQ0=0;MQRankSum=-7.291;QD=30.66;ReadPosRankSum=2.969;VQSLOD=3.1145;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,36:39:93.30:1206,93,0	1/1:0,12:12:36.12:467,36,0	0/0:23,0:23:62.93:0,63,868	0/0:29,0:30:83.98:0,84,1120	0/0:25,0:25:75.24:0,75,1104	0/0:32,0:32:96.33:0,96,1435	0/0:31,0:31:93.32:0,93,1394	0/0:32,0:32:96.32:0,96,1420	0/0:24,0:24:72.24:0,72,1074	0/0:29,0:29:84.28:0,84,1259	0/0:15,0:15:42.14:0,42,629	0/0:27,0:27:81.27:0,81,1209	0/0:19,0:19:57.18:0,57,832	0/0:18,0:18:54.17:0,54,791	0/0:30,0:30:90.29:0,90,1328	1/1:1,17:18:6.19:578,6,0	0/0:19,0:19:57.18:0,57,834	0/0:20,0:20:54.17:0,54,788	0/0:22,0:22:66.20:0,66,951	0/0:36,0:36:99:0,108,1618	0/0:36,0:36:99:0,108,1619	0/0:24,0:24:72.24:0,72,1077	0/0:18,0:18:54.17:0,54,789	0/0:31,0:31:93.27:0,93,1368	0/0:29,0:29:87.29:0,87,1304	0/0:29,0:29:87.29:0,87,1304	0/0:32,0:32:96.33:0,96,1436	0/0:9,0:9:27.09:0,27,405
chr10	101676011	.	A	ATG	8057.20	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-16.133;DP=637;FS=0.339;HRun=0;HaplotypeScore=76.1069;InbreedingCoeff=0.9998;MQ=80.99;MQ0=3;MQRankSum=-1.766;QD=48.25;ReadPosRankSum=-1.237;VQSLOD=5.5094;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.19:0,66,898	0/0:20,0:20:60.20:0,60,840	0/0:20,0:20:54.10:0,54,696	0/0:16,0:16:35.31:0,35,585	0/0:23,0:23:69.23:0,69,965	0/0:25,0:25:63.21:0,63,879	0/0:20,0:20:51.17:0,51,714	1/1:5,28:34:87.28:1527,87,0	0/0:18,0:18:54.18:0,54,756	0/0:37,0:37:99:0,105,1470	0/0:29,0:29:84.28:0,84,1177	0/0:13,0:13:39.13:0,39,546	0/0:24,0:24:66.22:0,66,924	0/0:20,0:20:60.20:0,60,839	0/0:28,0:28:81.26:0,81,1116	0/0:15,0:15:42.12:0,42,555	0/0:20,0:20:57.19:0,57,799	0/0:16,0:16:39.13:0,39,546	1/1:1,22:23:66.23:1185,66,0	1/1:2,29:31:84.29:1511,84,0	1/1:1,20:21:60.21:1080,60,0	0/0:26,0:26:78.26:0,78,1093	0/0:24,0:24:60.04:0,60,839	0/0:20,0:20:51.17:0,51,714	0/0:32,0:32:90.27:0,90,1223	1/1:1,19:18:51.16:884,51,0	1/1:1,27:28:78.27:1383,78,0	1/1:1,9:9:27.09:486,27,0
chr10	101676633	.	T	TC	2828.57	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-9.299;DP=443;FS=1.401;HRun=8;HaplotypeScore=44.3192;InbreedingCoeff=0.9798;MQ=79.73;MQ0=2;MQRankSum=-0.742;QD=22.63;ReadPosRankSum=0.237;VQSLOD=3.7403;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:26.96:0,27,234	0/0:10,0:10:27.01:0,27,247	0/0:15,0:15:27.11:0,27,306	0/0:11,0:10:19.94:0,20,159	0/0:25,0:25:66.03:0,66,603	0/0:22,0:21:63.01:0,63,572	0/0:7,0:7:18:0,18,164	1/1:6,22:26:54.14:611,54,0	0/0:19,0:19:57.02:0,57,517	0/0:29,0:29:78.03:0,78,712	0/0:27,0:27:75:0,75,676	0/0:14,0:14:39.02:0,39,357	0/0:13,0:13:39.02:0,39,356	0/0:14,0:14:33.02:0,33,302	0/0:16,0:15:45.02:0,45,412	0/0:11,0:11:33:0,33,297	0/0:21,0:21:63.03:0,63,576	1/1:12,0:12:32.52:212,33,0	1/1:2,10:13:8.47:332,8,0	1/1:5,18:23:41.40:598,41,0	1/1:1,5:6:15.04:173,15,0	0/0:9,0:9:24.01:0,24,219	0/0:19,0:19:51.03:0,51,466	0/0:8,0:10:23.05:0,23,198	0/0:17,0:17:48.02:0,48,439	1/1:2,10:12:27.08:310,27,0	1/1:2,23:25:54.03:623,54,0	1/1:0,6:6:15.04:173,15,0
chr10	101676640	.	C	CA	811.32	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=9.245;DP=436;FS=0.426;HRun=0;HaplotypeScore=49.4463;InbreedingCoeff=0.4720;MQ=80.12;MQ0=2;MQRankSum=-0.174;QD=6.88;ReadPosRankSum=1.145;VQSLOD=2.7661;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:30.09:0,30,394	0/0:10,0:10:30.09:0,30,403	0/0:15,0:15:39.96:0,40,479	0/0:10,0:9:26.51:0,27,280	0/0:23,0:23:69.22:0,69,932	0/0:22,0:21:66.21:0,66,904	0/0:9,0:9:23.97:0,24,281	0/1:24,0:22:7.75:91,0,8	0/0:19,0:19:57.19:0,57,779	0/0:32,0:32:96.20:0,96,1200	0/0:27,0:27:81.24:0,81,1054	0/0:16,0:16:45.10:0,45,590	0/0:14,0:14:42.13:0,42,571	0/0:13,0:13:39.11:0,39,506	0/0:15,0:14:45.15:0,45,628	0/0:11,0:11:33.11:0,33,453	0/0:21,0:21:63.21:0,63,872	1/1:0,13:13:33.11:479,33,0	0/1:14,0:14:43.77:44,0,74	0/1:20,0:20:10.44:98,0,10	0/1:6,0:6:10.78:23,0,11	0/0:8,0:8:24.08:0,24,322	0/0:17,0:17:51.17:0,51,698	0/0:9,0:9:23.67:0,24,303	0/0:17,0:17:51.15:0,51,683	0/1:11,0:11:20.72:37,0,21	1/1:24,0:24:45.20:159,45,0	1/1:6,0:6:12.58:44,13,0
chr10	101677729	.	GT	G	6003.54	PASS	AB=0.529;AC=15;AF=0.268;AN=56;BaseQRankSum=18.125;DP=691;FS=6.769;HRun=2;HaplotypeScore=80.9337;InbreedingCoeff=0.9030;MQ=82.88;MQ0=0;MQRankSum=-1.866;QD=32.28;ReadPosRankSum=0.355;VQSLOD=4.2885;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1440	0/0:8,0:8:24.08:0,24,359	0/0:30,0:29:78.26:0,78,1157	0/0:21,0:21:54.18:0,54,782	0/0:42,0:42:99:0,123,1820	0/0:27,0:27:81.26:0,81,1190	0/0:22,0:22:66.19:0,66,947	1/1:6,28:34:84.80:1066,85,0	0/0:17,0:17:51.17:0,51,754	0/0:29,0:29:87.23:0,87,1227	0/0:25,0:25:75.24:0,75,1103	0/0:24,0:24:69.23:0,69,1026	0/0:30,0:30:90.29:0,90,1327	0/0:18,0:18:54.17:0,54,773	0/0:29,0:29:87.27:0,87,1262	0/0:26,0:26:78.26:0,78,1169	0/0:19,0:19:57.19:0,57,851	1/1:1,14:15:39.12:483,39,0	1/1:2,23:25:68.69:828,69,0	1/1:1,19:20:56.04:687,56,0	1/1:0,37:37:99:1264,102,0	0/0:32,0:32:96.25:0,96,1342	0/0:35,0:35:99:0,99,1481	0/0:19,0:19:54.16:0,54,771	0/0:19,0:19:54.18:0,54,809	0/1:3,24:27:53.39:788,0,53	1/1:0,21:21:60.19:739,60,0	1/1:0,7:7:12.04:149,12,0
chr10	101677940	.	T	TAC	9006.77	PASS	AB=0.621;AC=12;AF=0.214;AN=56;BaseQRankSum=-0.317;DP=767;FS=9.105;HRun=0;HaplotypeScore=117.5639;InbreedingCoeff=0.7879;MQ=77.34;MQ0=0;MQRankSum=-1.347;QD=52.36;ReadPosRankSum=0.866;VQSLOD=4.5850;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,154,2462	0/0:13,0:13:39.13:0,39,629	0/0:25,0:25:67.47:0,67,1057	0/0:29,0:29:83.25:0,83,1226	0/0:38,0:38:99:0,114,1859	0/0:20,0:20:60.19:0,60,955	0/0:30,0:30:90.26:0,90,1385	1/1:2,19:23:66.19:1267,66,0	0/0:28,0:28:81.11:0,81,1235	0/0:29,0:29:84.29:0,84,1369	0/0:19,0:19:54.16:0,54,834	0/0:22,0:22:66.21:0,66,1052	0/0:29,0:29:87.25:0,87,1390	0/0:24,0:24:72.25:0,72,1173	0/0:38,0:38:99:0,108,1753	0/0:28,0:28:84.28:0,84,1345	0/0:42,0:42:99:0,126,2002	0/0:16,0:16:45.13:0,45,707	1/1:1,22:22:66.22:1290,66,0	1/1:0,28:28:81.28:1638,81,0	1/1:1,33:36:93.32:1889,93,0	0/0:19,0:19:57.19:0,57,930	0/0:28,0:28:84.29:0,84,1370	0/0:39,0:39:99:0,117,1876	0/0:27,0:27:78.25:0,78,1243	0/1:3,26:29:59.56:1497,0,60	1/1:1,21:23:60.21:1217,60,0	0/1:6,3:10:49.72:210,0,50
chr10	101678428	.	TG	T	373.52	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.260;DP=617;FS=1.072;HRun=2;HaplotypeScore=190.6445;InbreedingCoeff=0.9598;MQ=70.47;MQ0=0;MQRankSum=-3.333;QD=26.68;ReadPosRankSum=-0.402;VQSLOD=3.0797;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:36.02:0,36,415	0/0:5,0:5:11.67:0,12,97	0/0:17,0:17:50.07:0,50,660	0/0:20,0:20:50.82:0,51,693	0/0:24,0:22:54.03:0,54,635	0/0:34,0:34:78.23:0,78,943	0/0:26,0:26:57.11:0,57,653	0/0:22,0:22:57.18:0,57,767	0/0:23,0:23:60.17:0,60,691	0/0:21,0:21:53.32:0,53,699	0/0:20,0:18:51.01:0,51,571	0/0:25,0:25:66.18:0,66,749	0/0:29,0:29:75.21:0,75,875	0/0:25,0:25:57.15:0,57,637	0/0:37,0:37:96.27:0,96,1115	0/0:26,0:26:60.17:0,60,704	0/0:18,0:18:36.04:0,36,440	1/1:0,14:14:39.12:468,39,0	0/0:18,0:18:53.83:0,54,687	0/0:26,0:26:75.22:0,75,926	0/0:22,0:22:33.08:0,33,392	0/0:15,0:15:39.11:0,39,460	0/0:27,0:27:66.10:0,66,782	0/0:22,0:22:48.10:0,48,558	0/0:25,0:25:45.09:0,45,505	0/0:26,0:26:78.19:0,78,975	0/0:18,0:18:51.15:0,51,603	0/0:12,0:12:18.06:0,18,231
chr10	101680368	.	G	GACAC	4246.32	PASS	AB=0.688;AC=26;AF=0.464;AN=56;BaseQRankSum=-0.544;DP=677;FS=0.918;HRun=0;HaplotypeScore=129.4796;InbreedingCoeff=0.5898;MQ=54.10;MQ0=17;MQRankSum=0.207;QD=12.49;ReadPosRankSum=-0.812;VQSLOD=4.1195;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:26:10.14:114,10,0	1/1:2,1:5:3.01:42,3,0	0/0:30,0:6:5.88:0,6,51	0/0:45,0:18:10.51:0,11,154	1/1:22,0:20:21.47:223,21,0	0/0:25,0:27:13.44:0,13,759	0/0:22,0:23:39.10:0,39,555	0/1:25,0:25:20.52:231,0,21	0/0:23,0:26:46.03:0,46,700	0/0:19,0:18:39.13:0,39,614	0/0:21,0:21:32.27:0,32,658	1/1:8,2:31:6.44:47,6,0	1/1:16,0:16:11.32:103,11,0	1/1:4,0:25:5.90:39,6,0	0/0:19,0:19:42.14:0,42,683	1/1:22,0:22:8.93:77,9,0	0/0:23,0:26:54.14:0,54,786	1/1:16,0:16:0:30,0,0	1/1:8,13:20:35.46:509,35,0	0/1:10,10:20:39.92:137,0,40	1/1:11,25:45:40.82:718,41,0	0/0:16,0:16:5.50:0,6,313	0/0:16,0:17:36.03:0,36,502	0/0:41,0:43:96.25:0,96,1438	0/0:24,0:24:57.18:0,57,895	0/1:4,13:18:20.71:688,0,21	0/1:7,20:28:2.70:903,0,3	1/1:6,5:10:20.39:387,20,0
chr10	101680747	.	GT	G	1584.96	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.265;DP=470;FS=5.290;HRun=10;HaplotypeScore=62.4037;InbreedingCoeff=0.8885;MQ=77.95;MQ0=0;MQRankSum=-0.047;QD=19.33;ReadPosRankSum=-0.643;VQSLOD=4.3502;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:39.06:0,39,418	0/0:7,0:7:21.06:0,21,232	0/0:20,0:16:3.20:0,3,199	0/0:11,0:8:3.46:0,3,42	1/1:2,23:25:35.80:540,36,0	0/0:20,0:20:48.08:0,48,508	0/0:11,0:11:27.06:0,27,289	0/0:34,0:34:81.15:0,81,862	0/0:11,0:11:30.07:0,30,323	0/0:26,0:26:78.18:0,78,840	0/0:18,0:18:51.14:0,51,564	1/1:3,14:18:35.03:293,35,0	1/1:1,19:20:56.99:495,57,0	1/1:2,17:19:47.99:417,48,0	0/0:16,0:16:39.11:0,39,431	0/0:18,0:18:45.12:0,45,498	0/0:10,0:10:24.06:0,24,265	0/0:13,0:15:32.92:0,33,346	0/0:14,0:15:36.08:0,36,383	0/0:27,0:27:75.20:0,75,830	0/0:6,0:6:18.03:0,18,190	0/0:9,0:9:24.06:0,24,265	0/0:13,1:14:10.04:0,10,339	0/0:5,0:6:11.87:0,12,114	0/0:23,0:23:63.15:0,63,681	0/0:24,0:24:63.16:0,63,690	0/0:23,0:23:66.16:0,66,721	0/0:7,0:7:21.06:0,21,232
chr10	101680916	.	A	AT	520.46	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.496;DP=434;FS=0.922;HRun=7;HaplotypeScore=67.6148;InbreedingCoeff=0.9154;MQ=70.02;MQ0=0;MQRankSum=-1.645;QD=30.62;ReadPosRankSum=0.317;VQSLOD=3.9384;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:45.04:0,45,428	0/0:6,0:6:15.02:0,15,145	0/0:7,0:6:9.01:0,9,87	0/0:8,0:8:18.02:0,18,171	0/0:30,0:30:84.11:0,84,802	0/0:21,0:21:51.04:0,51,485	0/0:13,0:13:36.06:0,36,348	0/0:33,0:33:78.07:0,78,733	0/0:15,0:15:45.07:0,45,434	0/0:17,0:17:51.08:0,51,489	0/0:25,0:25:63.08:0,63,598	0/0:12,0:12:33.04:0,33,314	0/0:20,0:20:57.09:0,57,550	0/0:18,0:18:51.01:0,51,477	0/0:10,0:10:30.05:0,30,290	0/0:14,0:14:33.05:0,33,319	0/0:19,0:19:54.08:0,54,521	1/1:2,15:17:51.16:615,51,0	0/0:10,0:10:24.04:0,24,232	0/0:17,0:17:48.08:0,48,463	0/0:8,0:8:21.03:0,21,203	0/0:10,0:10:27.04:0,27,261	0/0:16,0:16:39.04:0,39,370	0/0:9,0:9:27.04:0,27,261	0/0:14,0:14:39.06:0,39,377	0/0:19,0:19:54.09:0,54,521	0/0:16,0:16:39.06:0,39,376	0/0:11,0:11:30.05:0,30,290
chr10	101680934	.	CT	C	6059.56	PASS	AB=0.538;AC=27;AF=0.482;AN=56;BaseQRankSum=11.913;DP=449;FS=9.645;HRun=7;HaplotypeScore=60.8232;InbreedingCoeff=0.9260;MQ=78.96;MQ0=0;MQRankSum=-1.097;QD=26.35;ReadPosRankSum=-0.496;VQSLOD=4.9631;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:54.08:534,54,0	1/1:0,6:6:18.04:184,18,0	0/0:11,0:10:27.07:0,27,325	0/0:15,0:15:39.08:0,39,459	1/1:4,25:29:75.17:765,75,0	0/0:22,0:22:63.20:0,63,793	0/0:12,0:12:33.11:0,33,415	1/1:6,21:27:63.13:643,63,0	0/0:14,0:14:39.12:0,39,489	0/0:15,0:15:39.11:0,39,471	0/0:24,0:24:69.22:0,69,868	1/1:4,8:12:24.05:245,24,0	1/1:1,18:19:51.12:520,51,0	1/1:1,13:14:39.09:398,39,0	0/0:15,0:15:36.10:0,36,430	1/1:2,9:11:27.06:275,27,0	0/0:22,0:22:66.21:0,66,830	0/0:21,0:21:48.15:0,48,604	1/1:0,13:13:39.08:393,39,0	1/1:2,17:19:45.10:459,45,0	1/1:1,10:11:30.05:299,30,0	0/0:11,0:11:30.10:0,30,378	0/0:14,0:14:39.12:0,39,491	0/0:7,0:7:21.07:0,21,264	0/0:16,0:16:48.14:0,48,592	0/1:3,18:21:50.08:488,0,50	1/1:0,15:15:42.10:428,42,0	1/1:0,14:14:42.10:428,42,0
chr10	101681015	.	G	GTT	4694.68	PASS	AB=0.781;AC=29;AF=0.518;AN=56;BaseQRankSum=7.669;DP=535;FS=2.729;HRun=12;HaplotypeScore=98.4306;InbreedingCoeff=0.8031;MQ=75.88;MQ0=0;MQRankSum=-1.328;QD=15.34;ReadPosRankSum=-1.628;VQSLOD=3.7623;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,12:20:38.85:559,39,0	1/1:3,6:9:24.07:321,24,0	0/1:15,0:13:16.56:32,0,17	0/0:12,0:11:7.76:0,8,45	1/1:15,10:31:56.77:585,57,0	0/0:16,0:18:38.47:0,38,328	0/0:17,0:18:23.87:0,24,222	1/1:5,1:22:41.87:214,42,0	0/0:15,0:17:38.59:0,39,387	0/0:26,0:29:59.09:0,59,507	0/0:17,0:17:35.88:0,36,323	1/1:3,5:11:27.27:354,27,0	1/1:1,8:10:27.09:369,27,0	1/1:10,8:19:47.59:559,48,0	0/0:16,0:18:47.51:0,48,412	1/1:2,13:17:32.59:416,33,0	0/0:22,0:25:59.18:0,59,502	1/1:25,0:25:53.35:492,53,0	0/1:9,0:16:1.80:69,0,2	1/1:14,0:30:22.94:187,23,0	1/1:6,1:12:5.19:163,5,0	0/0:12,0:13:13.17:0,13,183	0/0:19,0:21:53.73:0,54,473	0/0:20,0:20:51:0,51,472	0/0:19,0:20:41.62:0,42,366	1/1:13,0:25:14.46:133,14,0	0/1:11,0:24:3.47:142,0,3	1/1:10,0:20:25.43:98,25,0
chr10	101681018	.	T	TTG	1531.36	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=2.647;DP=528;FS=0.000;HRun=0;HaplotypeScore=105.6206;InbreedingCoeff=0.3856;MQ=76.06;MQ0=0;MQRankSum=0.504;QD=9.94;ReadPosRankSum=4.908;VQSLOD=3.0678;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:35.06:141,0,35	1/1:9,0:9:1.70:82,2,0	0/1:16,0:14:7.06:7,0,123	0/0:12,0:11:12.12:0,12,142	0/1:29,0:29:82.71:83,0,183	0/0:17,0:17:48.11:0,48,634	0/0:18,0:18:54.06:0,54,624	0/0:20,0:20:31.32:0,31,199	0/0:17,0:17:50.94:0,51,706	0/0:29,0:29:84.22:0,84,1088	0/0:16,0:16:48.13:0,48,655	0/1:11,0:11:10.04:74,0,10	1/1:10,0:10:25.57:128,26,0	0/1:19,0:19:30.54:119,0,31	0/0:18,0:18:51.15:0,51,725	0/1:17,0:17:1.14:101,0,1	0/0:25,0:25:72.15:0,72,957	1/1:2,22:25:59.72:958,60,0	0/0:16,0:16:40.91:0,41,267	0/0:30,0:30:62.97:0,63,452	0/0:13,0:13:14.66:0,15,142	0/0:10,0:10:26.79:0,27,350	0/0:21,0:21:60.17:0,60,856	0/0:20,0:20:60.18:0,60,857	0/0:20,0:20:60.15:0,60,784	0/0:27,0:27:69.45:0,69,492	0/0:24,0:24:61.48:0,61,387	0/0:20,0:20:39.94:0,40,223
chr10	101681537	.	GAA	G	1790.60	PASS	AB=0.986;AC=22;AF=0.393;AN=56;BaseQRankSum=3.570;DP=547;FS=6.123;HRun=3;HaplotypeScore=96.1897;InbreedingCoeff=-0.0202;MQ=68.76;MQ0=8;MQRankSum=-1.213;QD=5.06;ReadPosRankSum=1.558;VQSLOD=-0.1440;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:22.75:0,23,202	0/0:7,0:7:18.01:0,18,220	0/0:35,0:20:27.25:0,27,340	0/0:36,0:18:6.15:0,6,200	0/0:24,0:23:35.88:0,36,456	0/1:18,0:18:0.52:1,0,129	0/1:24,1:25:35.14:35,0,142	0/1:19,0:19:5.13:284,0,5	0/1:21,0:20:62.38:62,0,114	0/1:22,1:23:99:114,0,138	0/1:17,0:17:35.02:35,0,112	0/0:14,0:14:29.89:0,30,288	0/0:11,0:11:20.89:0,21,186	0/1:19,0:19:14.63:15,0,243	0/0:19,0:19:6.13:0,6,214	0/0:16,0:16:34.15:0,34,345	0/1:28,1:29:50.30:50,0,225	0/0:11,0:11:26.97:0,27,233	1/1:9,0:9:20.80:160,21,0	0/1:19,0:18:20:101,0,20	0/1:17,0:17:46.51:102,0,47	0/1:14,0:14:2.62:3,0,161	0/1:20,1:21:54.86:55,0,198	0/1:23,0:23:35.96:36,0,169	0/1:21,1:22:99:112,0,140	1/1:2,18:20:53.16:486,53,0	1/1:21,0:21:23.31:245,23,0	1/1:2,15:16:6:70,6,0
chr10	101681539	.	AAG	A	2892.84	PASS	AB=0.629;AC=24;AF=0.444;AN=54;BaseQRankSum=-6.702;DP=567;FS=15.317;HRun=0;HaplotypeScore=100.6675;InbreedingCoeff=0.7163;MQ=68.18;MQ0=8;MQRankSum=1.957;QD=10.71;ReadPosRankSum=2.831;VQSLOD=2.6146;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:21:12:0,12,107	0/0:6,0:10:12.24:0,12,124	./.	0/0:37,0:19:3:0,3,27	0/0:12,0:26:29.52:0,30,221	1/1:7,12:19:14.87:150,15,0	1/1:10,15:25:26.47:285,26,0	0/0:24,0:24:17.67:0,18,177	1/1:6,15:20:30.05:368,30,0	1/1:8,16:24:47.87:518,48,0	1/1:7,9:17:23.73:230,24,0	0/0:6,0:14:18:0,18,157	0/0:5,0:11:6:0,6,53	0/0:16,0:19:11.77:0,12,106	1/1:9,9:18:15.04:170,15,0	0/0:10,0:16:16.95:0,17,143	1/1:14,15:29:38.73:400,39,0	0/0:10,0:14:5.62:0,6,45	0/0:8,0:8:5.79:0,6,37	0/0:20,0:20:23.46:0,23,217	0/0:18,0:18:23.72:0,24,265	1/1:6,7:13:8.93:72,9,0	1/1:12,11:23:20.99:232,21,0	0/1:11,12:23:45.57:220,0,46	0/1:7,14:20:6.84:365,0,7	1/1:20,0:20:2.68:53,3,0	0/0:19,0:20:17.19:0,17,143	1/1:17,0:16:5.65:32,6,0
chr10	101681721	.	GA	G	2914.31	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=11.160;DP=449;FS=80.684;HRun=1;HaplotypeScore=72.9856;InbreedingCoeff=0.9827;MQ=98.92;MQ0=0;MQRankSum=-4.895;QD=18.92;ReadPosRankSum=-7.758;VQSLOD=-0.4518;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,10:24:65.68:525,66,0	1/1:4,1:5:11.97:97,12,0	0/0:30,0:29:86.80:0,87,1160	0/0:24,0:24:71.71:0,72,925	1/1:6,5:11:19.24:163,19,0	0/0:20,0:20:57.19:0,57,852	0/0:30,0:30:90.25:0,90,1300	1/1:11,2:13:25.47:206,25,0	0/0:26,0:26:52.44:0,52,1071	0/0:28,0:28:81.26:0,81,1164	0/0:10,0:10:30.10:0,30,449	1/1:1,6:7:18.01:168,18,0	1/1:1,8:9:26.95:229,27,0	1/1:1,8:9:24:221,24,0	0/0:24,0:24:69.20:0,69,969	1/1:3,6:9:26.93:227,27,0	0/0:24,0:24:69.21:0,69,1004	0/0:14,0:14:20.49:0,20,123	1/1:5,0:5:13.77:98,14,0	1/1:6,0:6:14.94:121,15,0	1/1:20,4:24:49.14:435,49,0	0/0:10,0:10:30.10:0,30,448	0/0:12,0:12:33.10:0,33,471	0/0:23,0:23:55.64:0,56,741	0/0:20,0:20:57.19:0,57,851	1/1:8,3:11:26.90:233,27,0	1/1:14,3:17:39.28:315,39,0	1/1:3,1:4:11.98:108,12,0
chr10	101681724	.	GGGT	G	1323.07	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=9.347;DP=456;FS=50.440;HRun=0;HaplotypeScore=94.8189;InbreedingCoeff=0.6008;MQ=97.50;MQ0=0;MQRankSum=-5.857;QD=8.43;ReadPosRankSum=-3.772;VQSLOD=-0.3130;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,1:25:39.88:226,40,0	1/1:5,0:5:5.20:29,5,0	0/0:29,0:28:80.33:0,80,1475	0/0:23,0:23:66.15:0,66,1369	1/1:5,5:10:13.75:141,14,0	0/0:20,0:20:57.18:0,57,1231	0/0:32,0:32:90.18:0,90,1891	0/1:13,0:13:16.49:45,0,16	0/0:28,0:28:78.74:0,79,1705	0/0:27,0:27:78.16:0,78,1694	0/0:10,0:10:30.10:0,30,664	1/1:1,6:7:18.52:212,19,0	1/1:1,8:9:24.06:268,24,0	1/1:1,8:9:24.07:279,24,0	0/0:22,0:22:66.23:0,66,1453	1/1:9,0:9:15.59:64,16,0	0/0:23,0:23:63.21:0,63,1409	0/1:17,0:17:1.09:1,0,62	0/1:6,0:6:12.41:12,0,16	1/1:6,0:6:0.19:41,0,0	0/1:25,0:25:7.88:69,0,8	0/0:10,0:10:30.10:0,30,664	0/0:12,0:12:36.12:0,36,755	0/0:22,0:22:54.18:0,54,1190	0/0:22,0:22:63.20:0,63,1301	1/1:10,0:10:1.74:86,2,0	0/0:19,0:19:3.32:0,3,34	1/1:6,0:6:0:42,0,0
chr10	101681726	.	GT	G	3042.58	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=11.840;DP=457;FS=80.599;HRun=1;HaplotypeScore=71.1959;InbreedingCoeff=0.9838;MQ=98.82;MQ0=0;MQRankSum=-4.859;QD=17.79;ReadPosRankSum=-6.053;VQSLOD=-0.1959;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,9:25:69.07:550,69,0	1/1:4,1:5:11.97:96,12,0	0/0:31,0:30:88.34:0,88,1133	0/0:23,0:23:66.20:0,66,922	1/1:9,0:9:16.32:127,16,0	0/0:21,0:21:60.16:0,60,834	0/0:33,0:33:93.15:0,93,1269	1/1:12,0:12:26.49:229,26,0	0/0:28,0:28:55.48:0,55,1098	0/0:26,0:26:78.16:0,78,1112	0/0:10,0:10:30.10:0,30,426	1/1:7,0:7:19.22:157,19,0	1/1:9,0:9:26.89:214,27,0	1/1:9,0:9:23.95:203,24,0	0/0:22,0:22:66.20:0,66,938	1/1:4,5:9:26.95:228,27,0	0/0:24,0:24:66.18:0,66,936	1/1:17,0:17:20.17:114,20,0	1/1:6,0:6:13.81:111,14,0	1/1:6,0:6:14.93:119,15,0	1/1:21,1:22:50.81:467,51,0	0/0:10,0:10:30.10:0,30,424	0/0:12,0:12:35.47:0,35,471	0/0:23,0:23:57.17:0,57,809	0/0:23,0:23:66.16:0,66,849	1/1:10,0:10:20.95:185,21,0	1/1:18,1:19:40.80:340,41,0	1/1:5,1:6:14.98:135,15,0
chr10	101681805	.	A	AACACACACACAC	2694.80	PASS	AB=1.000;AC=27;AF=0.500;AN=54;BaseQRankSum=-0.607;DP=517;FS=4.109;HRun=0;HaplotypeScore=170.4346;InbreedingCoeff=0.5569;MQ=68.83;MQ0=24;MQRankSum=-6.746;QD=10.95;ReadPosRankSum=-3.972;VQSLOD=1.6977;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:0:0,0,0	1/1:7,0:7:6.91:143,7,0	1/1:38,0:26:1.82:5,2,0	./.	1/1:8,0:8:3.01:50,3,0	0/0:16,0:16:18.68:0,19,401	0/1:26,0:27:64.76:65,0,918	1/1:24,0:21:15.05:390,15,0	0/0:24,0:24:24.04:0,24,693	0/0:24,0:24:30.04:0,30,715	0/0:14,0:13:15.05:0,15,511	1/1:5,0:11:1.40:29,1,0	1/1:9,0:8:2.44:6,2,0	1/1:12,0:12:6.02:105,6,0	0/0:21,0:21:21.07:0,21,660	0/0:11,0:11:2.79:0,3,102	0/0:25,0:24:35.86:0,36,897	1/1:9,0:9:3.01:96,3,0	1/1:10,0:9:3.90:87,4,0	0/0:4,0:4:1.82:0,2,5	0/0:12,0:9:0:0,0,0	0/0:11,0:11:21:0,21,567	0/1:21,0:21:30.68:31,0,585	0/0:44,0:43:27.54:0,28,700	0/0:28,0:29:36.16:0,36,1289	1/1:12,7:20:20.43:785,20,0	1/1:12,1:12:12.04:422,12,0	1/1:7,4:10:12.04:655,12,0
chr10	101683488	.	TGGGGGG	T	7479.11	PASS	AC=32;AF=0.593;AN=54;BaseQRankSum=3.441;DP=409;FS=11.119;HRun=16;HaplotypeScore=125.2614;InbreedingCoeff=0.8065;MQ=64.29;MQ0=1;MQRankSum=-7.928;QD=25.01;ReadPosRankSum=8.631;VQSLOD=1.0807;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,14:30:34.70:589,35,0	1/1:4,2:6:5.88:108,6,0	0/0:19,0:11:23.64:0,24,298	0/0:17,0:11:22.42:0,22,275	1/1:4,0:26:45.46:474,45,0	0/0:7,0:7:0:0,0,0	0/0:19,0:19:8.79:0,9,84	1/1:11,13:24:34.04:645,34,0	0/0:7,0:7:3:0,3,25	./.	0/0:2,0:2:0:0,0,0	1/1:3,0:18:42.07:493,42,0	1/1:7,0:23:38.92:458,39,0	1/1:6,0:23:42:494,42,0	0/0:6,0:6:10.28:0,10,232	1/1:3,14:17:36.05:647,36,0	0/0:12,0:12:24.08:0,24,593	1/1:4,0:13:8.35:231,8,0	1/1:12,9:21:25.12:483,25,0	1/1:10,14:24:41.12:750,41,0	1/1:11,8:19:9:163,9,0	1/1:5,0:5:0.09:1,0,0	0/0:5,0:5:8.31:0,8,151	0/0:7,0:7:9.03:0,9,235	0/0:5,0:5:6.02:0,6,145	1/1:7,16:23:44.75:809,45,0	1/1:2,17:19:41.80:755,42,0	1/1:0,8:8:21.07:378,21,0
chr10	101684246	.	GA	G	2600.47	PASS	AB=0.932;AC=24;AF=0.429;AN=56;BaseQRankSum=10.079;DP=524;FS=3.354;HRun=12;HaplotypeScore=85.0675;InbreedingCoeff=0.6712;MQ=81.01;MQ0=0;MQRankSum=-1.205;QD=9.60;ReadPosRankSum=0.058;VQSLOD=3.1307;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,16:20:44.81:348,45,0	1/1:2,1:4:5.02:29,5,0	0/1:27,0:25:3.93:4,0,201	0/1:22,1:21:14.77:15,0,98	0/0:31,0:31:21.25:0,21,325	0/0:14,0:18:26.21:0,26,380	0/0:18,2:20:4.62:0,5,403	1/1:6,16:22:35.31:295,35,0	0/0:14,2:17:12.65:0,13,284	0/1:21,2:23:4.35:4,0,324	0/0:19,0:19:27.03:0,27,264	0/0:13,1:14:8.82:0,9,137	0/0:13,0:13:14.05:0,14,173	0/0:13,0:13:9.03:0,9,124	0/0:22,0:23:50.25:0,50,537	1/1:3,9:12:23.90:186,24,0	0/1:17,4:22:9.72:10,0,436	0/0:14,1:15:11.85:0,12,158	1/1:6,9:15:29.84:230,30,0	1/1:6,11:17:35.82:276,36,0	1/1:5,18:24:22.02:360,22,0	0/0:11,0:11:18.03:0,18,182	0/0:13,1:14:4.27:0,4,210	0/0:25,2:27:22.77:0,23,578	0/0:15,0:18:29:0,29,293	1/1:6,19:25:53.76:416,54,0	1/1:2,20:23:45.98:427,46,0	1/1:2,9:11:26.89:209,27,0
chr10	101684495	.	A	AT	5518.48	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.487;DP=744;FS=6.903;HRun=2;HaplotypeScore=155.2879;InbreedingCoeff=0.9995;MQ=83.92;MQ0=0;MQRankSum=-4.962;QD=39.99;ReadPosRankSum=3.197;VQSLOD=3.6958;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,123,1525	0/0:13,0:13:39.10:0,39,468	0/0:24,0:24:72.21:0,72,861	0/0:21,0:20:51.12:0,51,614	1/1:1,28:29:81.27:1167,81,0	0/0:32,0:32:90.24:0,90,1088	0/0:24,0:24:69.22:0,69,855	0/0:35,0:35:93.28:0,93,1142	0/0:20,0:20:57.18:0,57,707	0/0:25,0:25:69.21:0,69,846	0/0:27,0:27:75.22:0,75,916	1/1:2,30:32:90.30:1296,90,0	1/1:0,26:27:75.10:1075,75,0	1/1:1,32:33:93.31:1333,93,0	0/0:28,0:28:81.25:0,81,1004	0/0:31,0:31:90.21:0,90,1074	0/0:29,0:29:87.27:0,87,1077	1/1:0,17:17:45.15:648,45,0	0/0:22,0:22:63.17:0,63,755	0/0:24,0:24:63.19:0,63,768	0/0:34,0:34:99:0,102,1249	0/0:30,0:30:87.23:0,87,1040	0/0:14,0:14:39.12:0,39,484	0/0:28,0:28:81.17:0,81,970	0/0:28,0:28:81.25:0,81,1004	0/0:32,0:32:93.28:0,93,1139	0/0:32,0:32:96.29:0,96,1176	0/0:8,0:8:24.08:0,24,298
chr10	101685185	.	A	ACACACAC	419.82	PASS	AB=0.928;AC=15;AF=0.288;AN=52;BaseQRankSum=6.896;DP=402;FS=2.867;HRun=0;HaplotypeScore=153.7481;InbreedingCoeff=0.4567;MQ=52.02;MQ0=20;MQRankSum=-5.954;QD=5.25;ReadPosRankSum=3.900;VQSLOD=2.7001;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:11:3.31:10,3,0	./.	0/0:41,0:7:21.01:0,21,331	0/0:28,0:10:11.27:0,11,206	1/1:5,2:7:3.01:71,3,0	0/0:27,0:24:42.88:0,43,945	0/0:14,0:14:35.15:0,35,369	0/1:11,0:10:34.27:40,0,34	0/0:14,0:14:33.48:0,33,414	0/0:24,0:22:47.98:0,48,954	0/0:17,0:16:36.44:0,36,539	0/0:9,0:9:5.42:0,5,39	0/1:11,2:13:37.22:132,0,37	0/0:10,0:10:0.72:0,1,7	0/0:28,0:28:75.54:0,76,1339	0/1:10,0:11:1.71:81,0,2	0/0:29,0:28:53.79:0,54,1013	1/1:4,0:4:3.13:46,3,0	0/0:6,0:5:0.58:0,1,8	./.	0/0:4,0:4:4.59:0,5,15	0/0:20,0:20:46.66:0,47,841	0/0:16,0:16:44.58:0,45,560	0/0:11,0:11:26.95:0,27,521	0/0:18,0:18:36.32:0,36,660	1/1:8,0:7:0.10:27,0,0	1/1:10,0:8:11.87:107,12,0	1/1:3,0:1:3.01:54,3,0
chr10	101685257	.	GT	G	3867.61	PASS	AB=0.619;AC=19;AF=0.339;AN=56;BaseQRankSum=9.072;DP=476;FS=0.423;HRun=1;HaplotypeScore=112.6327;InbreedingCoeff=0.2125;MQ=68.58;MQ0=2;MQRankSum=-8.959;QD=21.13;ReadPosRankSum=-0.822;VQSLOD=3.4273;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,16:22:43.40:379,0,43	1/1:1,2:3:6.02:79,6,0	0/0:21,0:21:63.15:0,63,945	0/0:27,0:26:70.46:0,70,1047	0/0:7,5:12:6.02:0,6,78	0/0:21,0:20:60.16:0,60,878	0/0:21,0:21:60.19:0,60,934	1/1:0,18:18:48.16:669,48,0	0/0:13,0:13:39.13:0,39,623	0/0:30,0:30:84.27:0,84,1315	0/0:20,0:20:54.17:0,54,838	0/1:7,9:16:99:172,0,205	0/1:8,9:17:99:293,0,116	0/1:5,15:20:99:372,0,149	0/0:26,0:26:78.27:0,78,1245	0/1:1,6:7:35.62:113,0,36	0/0:25,0:25:69.24:0,69,1101	0/1:1,8:9:20.75:285,0,21	1/1:0,15:15:45.13:608,45,0	0/1:7,5:12:70.63:185,0,71	1/1:1,10:11:11.97:144,12,0	0/0:12,0:12:27.09:0,27,431	0/0:19,0:19:57.19:0,57,909	0/0:21,0:21:63.20:0,63,983	0/0:25,0:25:75.26:0,75,1197	0/1:7,13:20:99:440,0,241	0/1:8,4:12:98.24:98,0,220	1/1:0,1:1:3.01:30,3,0
chr10	101685276	.	TA	T	1377.82	PASS	AB=0.676;AC=15;AF=0.268;AN=56;BaseQRankSum=9.518;DP=490;FS=6.662;HRun=1;HaplotypeScore=115.1710;InbreedingCoeff=-0.1089;MQ=73.95;MQ0=1;MQRankSum=-9.497;QD=8.20;ReadPosRankSum=2.654;VQSLOD=1.1244;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,12:26:78.05:78,0,341	0/0:2,1:3:2.96:0,3,39	0/0:26,0:26:74.54:0,75,1010	0/0:26,0:25:64.95:0,65,976	1/1:2,8:10:4.86:74,5,0	0/0:22,0:22:66.23:0,66,1053	0/0:24,0:24:69.19:0,69,1029	0/1:5,1:6:24.32:24,0,129	0/0:17,0:17:48.16:0,48,766	0/0:31,0:31:88.87:0,89,1396	0/0:21,0:21:63.21:0,63,1004	0/1:3,12:15:99:235,0,112	0/1:3,10:13:99:129,0,122	0/1:11,10:21:99:151,0,329	0/0:27,0:27:81.26:0,81,1272	0/1:3,6:9:65.39:65,0,75	0/0:27,0:27:81.28:0,81,1289	0/1:6,2:8:67.08:67,0,205	0/1:8,1:9:11.78:12,0,308	0/1:5,11:16:92.11:92,0,214	0/0:6,5:11:9.03:0,9,133	0/0:14,0:14:36.12:0,36,566	0/0:21,0:21:60.20:0,60,958	0/0:24,0:24:72.25:0,72,1151	0/0:28,0:28:84.29:0,84,1342	0/1:9,11:20:99:357,0,299	0/1:3,11:14:99:242,0,113	1/1:1,0:1:2.22:7,2,0
chr10	101685413	.	G	GCCT	7880.77	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=2.406;DP=715;FS=9.546;HRun=0;HaplotypeScore=155.6428;InbreedingCoeff=0.9992;MQ=86.70;MQ0=0;MQRankSum=-5.242;QD=64.07;ReadPosRankSum=0.314;VQSLOD=5.2725;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,2010	0/0:11,0:11:30.10:0,30,529	0/0:26,0:26:72.59:0,73,1174	0/0:25,0:25:68.84:0,69,1058	1/1:1,14:16:30.10:707,30,0	0/0:19,0:19:54.18:0,54,940	0/0:34,0:34:99:0,102,1794	0/0:24,0:24:66.22:0,66,1138	0/0:27,0:27:78.27:0,78,1363	0/0:22,0:22:60.21:0,60,1056	0/0:13,0:13:30.10:0,30,529	1/1:2,27:29:87.30:2050,87,0	1/1:4,22:26:69.20:1512,69,0	1/1:0,33:33:99:2336,99,0	0/0:29,0:29:84.27:0,84,1454	0/0:37,0:37:99:0,102,1790	0/0:44,0:43:99:0,132,2282	1/1:2,17:19:54.19:1276,54,0	0/0:21,0:21:60.21:0,60,1059	0/0:22,0:22:56.67:0,57,967	0/0:56,0:56:99:0,163,2779	0/0:22,0:22:63.22:0,63,1107	0/0:10,0:10:27.04:0,27,414	0/0:36,0:36:99:0,108,1897	0/0:17,0:17:51.17:0,51,882	0/0:30,0:30:84.29:0,84,1474	0/0:16,0:16:45.15:0,45,769	0/0:10,0:11:27.98:0,28,470
chr10	101685696	.	AC	A	4242.95	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.998;DP=734;FS=9.745;HRun=4;HaplotypeScore=67.5471;InbreedingCoeff=0.9998;MQ=84.02;MQ0=0;MQRankSum=-2.168;QD=32.39;ReadPosRankSum=3.626;VQSLOD=5.1562;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.29:0,87,1217	0/0:14,0:14:42.14:0,42,586	0/0:29,0:29:84.23:0,84,1116	0/0:21,0:21:57.19:0,57,780	1/1:1,22:23:60.18:717,60,0	0/0:27,0:27:81.26:0,81,1117	0/0:24,0:24:72.24:0,72,1007	0/0:26,0:26:69.22:0,69,951	0/0:30,0:30:87.28:0,87,1203	0/0:31,0:31:90.29:0,90,1244	0/0:18,0:18:54.18:0,54,755	1/1:1,24:25:60.18:720,60,0	1/1:0,25:25:75.23:900,75,0	1/1:1,28:29:84.26:1008,84,0	0/0:41,0:41:99:0,117,1606	0/0:18,0:18:54.18:0,54,756	0/0:21,0:21:63.21:0,63,881	1/1:0,29:29:75.23:899,75,0	0/0:23,0:23:66.22:0,66,923	0/0:42,0:42:99:0,120,1680	0/0:28,0:28:84.27:0,84,1158	0/0:45,0:45:99:0,132,1824	0/0:18,0:18:54.18:0,54,747	0/0:22,0:22:63.21:0,63,881	0/0:19,0:19:54.18:0,54,755	0/0:35,0:35:99:0,102,1397	0/0:32,0:30:90.27:0,90,1224	0/0:9,0:9:27.09:0,27,378
chr10	101686211	.	ATGTGTGTGTG	A	2412.56	PASS	AB=0.658;AC=7;AF=0.130;AN=54;BaseQRankSum=8.643;DP=678;FS=0.704;HRun=0;HaplotypeScore=217.6389;InbreedingCoeff=0.6619;MQ=65.75;MQ0=11;MQRankSum=-8.975;QD=24.13;ReadPosRankSum=3.338;VQSLOD=2.9285;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:2.86:0,3,143	0/0:18,0:18:9.50:0,10,287	./.	0/0:32,0:21:2.09:0,2,45	1/1:15,6:24:3.48:91,3,0	0/0:18,0:20:27.09:0,27,1055	0/0:21,0:22:42.14:0,42,1879	0/0:24,0:24:27.08:0,27,1008	0/0:19,0:24:45.15:0,45,1952	0/0:27,0:28:45.99:0,46,1508	0/0:18,0:19:30.10:0,30,1190	1/1:14,9:25:33.11:896,33,0	1/1:11,14:26:42.14:1237,42,0	0/1:12,1:25:0.69:324,0,1	0/0:20,0:25:45.15:0,45,1841	0/0:27,0:27:6.40:0,6,261	0/0:32,0:35:65.35:0,65,2794	0/0:15,0:24:17.37:0,17,165	0/0:20,0:20:21.98:0,22,549	0/0:14,0:14:6.02:0,6,209	0/0:31,0:29:3.01:0,3,124	0/0:30,0:31:66.21:0,66,2549	0/0:18,0:19:27.07:0,27,935	0/0:27,0:29:60.21:0,60,2513	0/0:25,0:27:63.22:0,63,2790	0/0:15,0:14:24.08:0,24,1103	0/0:14,0:14:12.04:0,12,468	0/0:11,0:12:30.10:0,30,1149
chr10	101686252	.	T	TGTGT	350.62	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=0.810;DP=557;FS=0.000;HRun=0;HaplotypeScore=136.4617;InbreedingCoeff=0.5956;MQ=62.08;MQ0=16;MQRankSum=-2.008;QD=1.82;ReadPosRankSum=-2.622;VQSLOD=1.5345;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:2.96:26,3,0	1/1:8,0:8:3.48:60,3,0	0/1:31,0:15:0:0,0,0	0/0:36,0:20:2.95:0,3,17	0/0:17,0:17:3.19:0,3,21	0/0:14,0:14:12.03:0,12,168	0/0:25,0:25:24.38:0,24,356	1/1:19,0:19:3.90:60,4,0	0/0:26,0:26:26.49:0,26,487	0/0:15,0:14:9.01:0,9,103	0/0:17,0:17:12.03:0,12,166	0/0:20,0:20:29.74:0,30,252	0/0:19,0:19:42.05:0,42,390	0/0:25,0:25:29.96:0,30,277	0/0:23,0:23:33.08:0,33,428	1/1:15,0:17:5.71:104,6,0	0/0:32,0:32:21.26:0,21,637	0/0:27,0:27:6.01:0,6,56	1/1:10,0:10:3.01:44,3,0	1/1:7,0:7:2.99:25,3,0	1/1:24,1:31:1.40:2,1,0	0/1:21,0:21:1.93:2,0,218	0/0:12,0:12:9.02:0,9,121	0/0:28,0:27:30.03:0,30,377	0/0:28,0:28:33.10:0,33,495	1/1:9,0:9:3.48:40,3,0	1/1:4,0:4:3.01:48,3,0	1/1:5,0:5:6.02:100,6,0
chr10	101686750	.	T	TGG	4467.30	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=2.108;DP=605;FS=1.539;HRun=2;HaplotypeScore=108.7055;InbreedingCoeff=0.9786;MQ=60.60;MQ0=17;MQRankSum=-1.925;QD=22.23;ReadPosRankSum=-2.647;VQSLOD=2.2541;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:34:91.02:628,91,0	1/1:9,0:9:25.07:195,25,0	0/0:24,0:9:16.67:0,17,156	0/0:35,0:13:8.06:0,8,151	0/0:23,0:23:24.21:0,24,406	0/0:18,0:18:44.90:0,45,402	0/0:24,0:23:51.05:0,51,561	1/1:30,1:30:68.33:640,68,0	0/0:20,0:20:58.89:0,59,534	0/0:22,0:22:53.05:0,53,571	0/0:17,0:17:32.99:0,33,328	0/0:25,0:25:62.91:0,63,603	0/0:8,0:8:14.98:0,15,139	0/0:13,0:12:32.97:0,33,341	0/0:18,0:17:41.88:0,42,450	1/1:10,0:11:22.18:137,22,0	0/0:39,0:39:99:0,102,999	0/0:28,0:28:76.81:0,77,602	1/1:18,1:18:19.70:335,20,0	1/1:8,4:12:29.22:402,29,0	1/1:26,2:27:55.34:556,55,0	0/0:19,0:19:44.72:0,45,437	0/0:20,0:20:41.95:0,42,365	0/0:36,0:36:99:0,102,1048	0/0:15,0:14:32.79:0,33,344	1/1:15,1:14:38.69:421,39,0	1/1:27,9:36:62.74:1070,63,0	1/1:5,0:5:11.83:83,12,0
chr10	101686751	.	GGT	G	483.09	PASS	AB=0.949;AC=17;AF=0.315;AN=54;BaseQRankSum=4.461;DP=601;FS=0.000;HRun=0;HaplotypeScore=117.5218;InbreedingCoeff=0.1638;MQ=59.47;MQ0=17;MQRankSum=-2.294;QD=1.52;ReadPosRankSum=-0.075;VQSLOD=1.8444;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:22.06:104,22,0	1/1:9,0:9:5.68:28,6,0	./.	0/0:34,0:12:0:0,0,0	0/1:21,1:23:21.03:21,0,101	0/0:18,0:18:10.88:0,11,173	0/1:20,3:23:50.15:50,0,282	0/1:30,0:29:0.98:1,0,76	0/1:20,0:20:7.04:7,0,201	0/0:21,0:21:21.07:0,21,293	0/0:17,0:17:18.03:0,18,229	0/1:25,1:26:35.96:36,0,280	0/0:7,0:7:3.01:0,3,45	0/0:13,0:12:15.03:0,15,203	0/1:17,0:16:11.99:12,0,242	1/1:11,0:11:14.20:70,14,0	0/1:34,5:39:48.10:48,0,489	1/1:21,5:27:20.35:211,20,0	0/0:17,0:16:11.93:0,12,141	0/0:13,0:13:21.01:0,21,205	0/0:27,0:26:13.26:0,13,114	0/0:19,0:19:15.05:0,15,225	0/1:19,1:20:24.02:24,0,73	0/1:34,3:36:36.02:36,0,635	0/0:15,0:14:3.32:0,3,190	0/0:15,0:14:23.69:0,24,210	0/0:35,0:36:16.24:0,16,409	0/0:5,0:5:5.69:0,6,48
chr10	101686754	.	GTGT	G	222.93	PASS	AB=0.767;AC=3;AF=0.054;AN=56;BaseQRankSum=6.602;DP=624;FS=2.817;HRun=0;HaplotypeScore=135.0943;InbreedingCoeff=-0.0594;MQ=58.98;MQ0=17;MQRankSum=-5.085;QD=4.13;ReadPosRankSum=-0.105;VQSLOD=2.7411;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,6:35:99:177,0,144	0/1:6,2:8:27.47:27,0,67	0/0:24,0:8:18:0,18,191	0/0:36,0:12:17.61:0,18,285	0/0:24,0:24:53.72:0,54,794	0/0:20,0:20:51.17:0,51,836	0/0:24,0:23:40.09:0,40,857	0/0:31,0:30:73.80:0,74,696	0/0:22,0:22:66.18:0,66,1031	0/0:21,0:21:60.67:0,61,1027	0/0:20,0:20:45.15:0,45,790	0/0:26,0:26:59.68:0,60,972	0/0:9,0:9:18.33:0,18,246	0/0:15,0:14:33.11:0,33,611	0/0:18,0:17:42:0,42,723	0/1:6,4:11:30.51:118,0,31	0/0:40,0:40:99:0,105,1801	0/0:27,0:27:68.53:0,69,822	0/0:17,0:16:23.19:0,23,559	0/0:15,0:15:38.90:0,39,661	0/0:27,0:26:43.73:0,44,475	0/0:20,0:20:47.63:0,48,806	0/0:20,0:20:45.01:0,45,617	0/0:37,0:36:99:0,102,1865	0/0:17,0:16:12.25:0,12,557	0/0:17,0:15:44.38:0,44,682	0/0:37,0:38:99:0,101,1426	0/0:5,0:5:11.84:0,12,155
chr10	101686798	.	GGGGA	G	1823.65	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.013;DP=454;FS=3.634;HRun=0;HaplotypeScore=120.2860;InbreedingCoeff=0.9861;MQ=60.17;MQ0=3;MQRankSum=-3.803;QD=34.41;ReadPosRankSum=-0.669;VQSLOD=3.4621;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:63.62:0,64,338	0/0:8,0:8:17.36:0,17,100	0/0:29,0:19:26.46:0,26,992	0/0:25,0:18:51.14:0,51,1076	1/1:1,15:16:27.04:441,27,0	0/0:16,0:16:45.15:0,45,1123	0/0:20,0:20:30.79:0,31,970	0/0:18,0:18:47.99:0,48,305	0/0:15,0:15:42.14:0,42,1048	0/0:14,0:14:36.11:0,36,848	0/0:15,0:15:42.12:0,42,946	1/1:2,15:17:39.13:708,39,0	1/1:1,8:9:21.54:397,22,0	1/1:1,10:11:27.01:437,27,0	0/0:12,0:12:20.10:0,20,686	0/0:18,0:18:42.78:0,43,214	0/0:29,0:29:74.87:0,75,1715	0/0:16,0:16:38.98:0,39,389	0/0:7,0:7:17.32:0,17,113	0/0:9,0:9:22.87:0,23,125	0/0:16,0:16:22.11:0,22,136	0/0:11,0:11:30.07:0,30,646	0/0:9,0:9:27.07:0,27,612	0/0:32,0:32:74.77:0,75,1786	0/0:12,0:11:33.11:0,33,787	0/0:10,0:10:28.54:0,29,148	0/0:21,0:21:48.12:0,48,263	0/0:6,0:6:17.06:0,17,86
chr10	101686802	.	AGG	A	3746.56	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=13.035;DP=446;FS=1.005;HRun=9;HaplotypeScore=97.2323;InbreedingCoeff=0.9094;MQ=61.16;MQ0=2;MQRankSum=-6.222;QD=17.27;ReadPosRankSum=2.866;VQSLOD=2.1963;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,25:32:54.63:629,55,0	1/1:1,7:8:12.02:140,12,0	0/0:29,0:20:47.71:0,48,674	0/0:22,0:18:42.14:0,42,670	1/1:16,0:16:18.74:78,19,0	0/0:16,0:16:48.16:0,48,785	0/0:17,0:17:39.09:0,39,608	1/1:4,15:19:45.12:513,45,0	0/0:14,0:14:42.14:0,42,689	0/0:12,0:12:33.10:0,33,519	0/0:15,0:15:36.12:0,36,589	1/1:16,0:16:32.14:133,32,0	0/1:9,0:9:2.63:56,0,3	1/1:11,0:11:1.82:58,2,0	0/0:13,0:13:33.11:0,33,536	1/1:1,16:17:42.12:487,42,0	0/0:27,0:27:69.11:0,69,1127	1/1:3,0:16:10.83:47,11,0	1/1:1,7:8:18.04:200,18,0	1/1:1,10:11:21.04:245,21,0	1/1:5,11:16:15.50:177,15,0	0/0:12,0:12:30.10:0,30,479	0/0:9,0:9:24.08:0,24,393	0/0:30,0:30:80.78:0,81,1229	0/0:13,0:12:33.11:0,33,538	1/1:1,10:11:30.07:338,30,0	1/1:3,18:21:39.04:436,39,0	1/1:0,6:6:18.05:210,18,0
chr10	101687849	.	TA	T	4788.61	PASS	AB=0.957;AC=25;AF=0.446;AN=56;BaseQRankSum=10.091;DP=610;FS=0.698;HRun=11;HaplotypeScore=75.6837;InbreedingCoeff=0.9515;MQ=78.07;MQ0=0;MQRankSum=-1.127;QD=16.34;ReadPosRankSum=-0.618;VQSLOD=5.2960;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:53.89:0,54,540	0/0:6,0:6:18.05:0,18,192	0/0:21,0:20:31.96:0,32,252	0/1:20,1:19:1.34:1,0,157	1/1:2,28:30:74.53:589,75,0	0/0:19,1:20:20.47:0,20,423	0/0:23,2:25:16.86:0,17,582	1/1:8,31:40:59.87:673,60,0	0/0:22,1:23:26.43:0,26,456	0/0:14,0:14:30.08:0,30,320	0/0:25,1:26:47.54:0,48,711	1/1:6,21:28:61.94:498,62,0	1/1:4,15:19:29.94:245,30,0	1/1:3,10:13:29.96:246,30,0	0/0:20,1:21:26.48:0,26,487	0/0:22,1:24:38.35:0,38,596	0/0:19,2:21:23.37:0,23,438	1/1:2,14:17:40.98:326,41,0	1/1:3,14:18:43.91:339,44,0	1/1:4,23:28:58.85:466,59,0	1/1:4,15:19:32.96:271,33,0	0/0:29,1:30:50.46:0,50,728	0/0:19,0:20:47.92:0,48,474	0/0:18,0:18:26.39:0,26,422	0/0:25,1:26:32.43:0,32,537	1/1:6,17:23:44.90:369,45,0	1/1:3,28:31:77.91:640,78,0	1/1:0,5:5:14.98:123,15,0
chr10	101688798	.	AATAAAT	A	4174.33	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.363;DP=311;FS=19.880;HRun=0;HaplotypeScore=97.0946;InbreedingCoeff=0.9382;MQ=53.44;MQ0=0;MQRankSum=-10.947;QD=28.02;ReadPosRankSum=-0.826;VQSLOD=1.5305;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,4:8:14.97:261,15,0	1/1:3,3:6:18.06:356,18,0	0/0:5,0:3:8.99:0,9,165	0/0:6,0:4:12.03:0,12,260	0/0:18,0:18:54.17:0,54,1574	0/0:21,0:21:63.17:0,63,1695	0/0:3,0:3:9.03:0,9,244	1/1:28,0:28:64:495,64,0	0/0:7,0:7:21.07:0,21,728	0/0:14,0:14:42.14:0,42,1089	0/0:7,0:7:21.06:0,21,516	0/0:8,0:8:24.08:0,24,769	0/0:5,0:5:15.05:0,15,321	0/0:9,0:9:27.06:0,27,624	0/0:9,0:9:27.09:0,27,821	1/1:2,6:8:24.08:515,24,0	0/0:19,0:19:57.19:0,57,1580	0/0:10,0:10:30.08:0,30,884	1/1:13,0:13:34.96:324,35,0	1/1:21,0:21:53.51:524,54,0	1/1:3,0:3:6.01:60,6,0	0/0:4,0:4:12.04:0,12,359	0/0:6,0:6:15.01:0,15,300	0/0:3,0:3:9.03:0,9,199	0/0:8,0:8:24.08:0,24,806	1/1:33,0:33:92.18:874,92,0	1/1:21,0:21:58.46:530,58,0	1/1:8,0:8:21.06:234,21,0
chr10	101688799	.	ATAAAT	A	7496.52	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.149;DP=310;FS=19.771;HRun=0;HaplotypeScore=78.4923;InbreedingCoeff=0.9353;MQ=53.50;MQ0=0;MQRankSum=-11.288;QD=51.00;ReadPosRankSum=-0.725;VQSLOD=2.8855;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:14.96:174,15,0	1/1:6,0:6:17.74:183,18,0	0/0:5,0:3:9.03:0,9,164	0/0:6,0:4:9.50:0,10,214	0/0:18,0:18:54.17:0,54,1421	0/0:21,0:21:63.21:0,63,1617	0/0:3,0:3:9.03:0,9,222	1/1:0,27:27:78.11:1266,78,0	0/0:7,0:7:21.07:0,21,650	0/0:14,0:14:42.14:0,42,1019	0/0:8,0:8:24.08:0,24,548	0/0:8,0:8:24.08:0,24,682	0/0:5,0:5:15.05:0,15,308	0/0:9,0:9:27.07:0,27,587	0/0:10,0:10:30.10:0,30,787	1/1:8,0:8:23.86:284,24,0	0/0:19,0:19:57.19:0,57,1490	0/0:10,0:10:30.08:0,30,808	1/1:4,9:13:39.13:793,39,0	1/1:3,18:21:57.16:1160,57,0	1/1:1,1:2:6.01:97,6,0	0/0:4,0:4:12.04:0,12,326	0/0:5,0:5:15.02:0,15,278	0/0:3,0:3:9.03:0,9,178	0/0:8,0:8:24.08:0,24,756	1/1:11,22:33:99:1921,99,0	1/1:8,13:21:63.04:1132,63,0	1/1:0,8:8:21.07:487,21,0
chr10	101688802	.	AAT	A	1989.16	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.102;DP=317;FS=18.976;HRun=0;HaplotypeScore=80.2651;InbreedingCoeff=0.9334;MQ=55.29;MQ0=0;MQRankSum=-11.212;QD=13.26;ReadPosRankSum=0.520;VQSLOD=1.5832;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,2:9:11.95:91,12,0	1/1:3,3:6:18.01:206,18,0	0/0:6,0:4:11.88:0,12,130	0/0:5,0:4:12.03:0,12,176	0/0:19,0:19:57.19:0,57,940	0/0:21,0:21:63.17:0,63,994	0/0:3,0:3:9.03:0,9,148	1/1:27,0:27:54.75:281,55,0	0/0:7,0:7:21.07:0,21,364	0/0:15,0:15:45.14:0,45,693	0/0:8,0:8:24.06:0,24,347	0/0:9,0:9:27.09:0,27,458	0/0:5,0:5:15.05:0,15,224	0/0:8,0:8:24.06:0,24,358	0/0:11,0:11:33.11:0,33,536	1/1:6,2:8:23.36:216,23,0	0/0:19,0:19:57.16:0,57,918	0/0:10,0:10:27.09:0,27,455	1/1:14,0:14:37.91:215,38,0	1/1:22,0:22:50.69:299,51,0	1/1:3,0:3:2.96:19,3,0	0/0:5,0:5:15.05:0,15,240	0/0:4,0:4:12.03:0,12,173	0/0:4,0:4:12.02:0,12,155	0/0:8,0:8:24.08:0,24,422	1/1:32,0:32:82.36:475,82,0	1/1:21,0:21:45.95:269,46,0	1/1:8,0:8:20.69:130,21,0
chr10	101688803	.	AT	A	2798.53	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.032;DP=314;FS=17.358;HRun=1;HaplotypeScore=69.7411;InbreedingCoeff=0.9260;MQ=55.56;MQ0=0;MQRankSum=-11.191;QD=19.30;ReadPosRankSum=0.755;VQSLOD=2.5427;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:10.76:50,11,0	1/1:6,0:6:16.50:78,16,0	0/0:6,0:4:11.88:0,12,119	0/0:5,0:4:9.50:0,10,128	0/0:19,0:19:57.17:0,57,784	0/0:21,0:21:63.16:0,63,842	0/0:3,0:3:9.03:0,9,127	1/1:27,0:27:68.68:667,69,0	0/0:7,0:7:21.05:0,21,287	0/0:15,0:15:45.14:0,45,597	0/0:9,0:9:24.04:0,24,297	0/0:10,0:10:30.07:0,30,394	0/0:5,0:5:15.05:0,15,204	0/0:8,0:8:24.06:0,24,316	0/0:12,0:12:36.09:0,36,473	1/1:8,0:8:14.25:75,14,0	0/0:19,0:19:57.16:0,57,783	0/0:9,0:9:27.08:0,27,371	1/1:10,4:14:41.74:369,42,0	1/1:19,3:22:56.54:447,57,0	1/1:2,0:2:2.97:20,3,0	0/0:5,0:5:15.04:0,15,195	0/0:4,0:4:12.03:0,12,151	0/0:4,0:4:12.02:0,12,145	0/0:8,0:8:24.08:0,24,344	1/1:24,7:31:92.14:739,92,0	1/1:14,4:18:50.64:427,51,0	1/1:8,0:8:20.77:139,21,0
chr10	101688865	.	ATTTG	A	6478.28	PASS	AB=0.588;AC=19;AF=0.339;AN=56;BaseQRankSum=14.243;DP=457;FS=21.472;HRun=0;HaplotypeScore=93.6156;InbreedingCoeff=0.9169;MQ=80.92;MQ0=0;MQRankSum=-7.177;QD=39.50;ReadPosRankSum=-0.950;VQSLOD=3.2258;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,10:12:24.08:424,24,0	1/1:1,6:7:18.06:318,18,0	0/0:21,0:21:45.15:0,45,1046	0/0:15,0:15:33.03:0,33,727	0/0:30,0:30:84.28:0,84,2037	0/0:17,0:17:51.18:0,51,1309	0/0:12,0:12:33.11:0,33,848	1/1:5,27:32:81.22:1293,81,0	0/0:10,0:10:30.10:0,30,770	0/0:23,0:23:63.22:0,63,1617	0/0:20,0:20:60.21:0,60,1532	0/0:16,0:16:45.15:0,45,1103	0/0:11,0:11:33.11:0,33,847	0/0:14,0:14:36.12:0,36,925	0/0:20,0:20:57.20:0,57,1462	1/1:2,14:16:36.12:622,36,0	0/0:23,0:23:63.22:0,63,1587	0/0:13,0:13:33.11:0,33,811	1/1:5,10:15:30.09:499,30,0	1/1:2,15:17:45.15:793,45,0	1/1:0,7:7:15.05:265,15,0	0/0:7,0:7:21.07:0,21,539	0/0:13,0:13:39.13:0,39,1001	0/0:11,0:11:33.11:0,33,846	0/0:17,0:17:51.18:0,51,1309	0/1:9,21:30:10.72:1046,0,11	1/1:0,21:21:57.20:1007,57,0	1/1:3,4:6:12.04:212,12,0
chr10	101689506	.	CT	C	3743.02	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=16.843;DP=563;FS=3.522;HRun=1;HaplotypeScore=86.9071;InbreedingCoeff=0.9945;MQ=82.61;MQ0=0;MQRankSum=-4.316;QD=22.41;ReadPosRankSum=2.624;VQSLOD=3.9544;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:56.80:467,57,0	1/1:0,7:7:20.99:184,21,0	0/0:24,0:24:71.22:0,71,1034	0/0:11,0:11:27.01:0,27,376	0/0:30,0:30:90.26:0,90,1381	0/0:25,0:25:75.26:0,75,1192	0/0:21,0:21:63.21:0,63,1003	1/1:2,21:23:61.95:415,62,0	0/0:24,0:24:72.24:0,72,1135	0/0:26,0:26:72.22:0,72,1104	0/0:15,0:15:45.15:0,45,708	0/0:15,0:15:45.15:0,45,707	0/0:29,0:29:84.27:0,84,1317	0/0:19,0:19:57.19:0,57,905	0/0:25,0:25:72.25:0,72,1151	1/1:5,15:20:56.78:476,57,0	0/0:30,0:30:90.27:0,90,1383	0/0:17,0:17:51.17:0,51,815	1/1:1,19:20:55.64:466,56,0	1/1:1,11:12:32.80:265,33,0	1/1:5,15:20:53.90:459,54,0	0/0:17,0:17:51.17:0,51,813	0/0:18,0:18:54.18:0,54,857	0/0:28,0:28:84.27:0,84,1316	0/0:22,0:22:66.21:0,66,1029	1/1:1,14:15:41.90:374,42,0	1/1:2,21:23:65.69:537,66,0	1/1:0,4:4:11.98:98,12,0
chr10	101689508	.	GTT	G	4628.92	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=16.807;DP=556;FS=1.128;HRun=2;HaplotypeScore=93.9300;InbreedingCoeff=0.9944;MQ=81.53;MQ0=0;MQRankSum=-4.227;QD=28.57;ReadPosRankSum=2.489;VQSLOD=4.5561;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:58.36:603,58,0	1/1:0,7:7:21.06:233,21,0	0/0:24,0:24:72.14:0,72,1339	0/0:9,0:9:24.08:0,24,456	0/0:29,0:29:81.28:0,81,1620	0/0:25,0:25:72.22:0,72,1368	0/0:21,0:21:63.22:0,63,1280	1/1:5,17:22:62.44:541,62,0	0/0:22,0:22:66.23:0,66,1338	0/0:27,0:27:75.24:0,75,1405	0/0:15,0:15:45.07:0,45,820	0/0:15,0:15:45.15:0,45,913	0/0:28,0:28:81.28:0,81,1642	0/0:19,0:19:57.16:0,57,1084	0/0:26,0:26:75.26:0,75,1502	1/1:4,15:19:52.34:555,52,0	0/0:30,0:30:90.29:0,90,1763	0/0:18,0:18:54.15:0,54,1054	1/1:0,19:19:57.01:604,57,0	1/1:0,11:11:30.05:311,30,0	1/1:3,15:18:49.95:538,50,0	0/0:17,0:17:48.16:0,48,948	0/0:18,0:18:48.12:0,48,840	0/0:28,0:28:84.29:0,84,1706	0/0:23,0:23:63.18:0,63,1171	1/1:0,14:14:39.08:436,39,0	1/1:3,21:24:67.59:682,68,0	1/1:0,4:4:12.03:126,12,0
chr10	101689680	.	CGTGTGT	C	1113.26	PASS	AB=0.923;AC=9;AF=0.173;AN=52;BaseQRankSum=4.807;DP=559;FS=7.177;HRun=0;HaplotypeScore=129.5110;InbreedingCoeff=0.7428;MQ=64.74;MQ0=6;MQRankSum=-5.782;QD=10.50;ReadPosRankSum=1.139;VQSLOD=2.1104;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:21.07:0,21,470	0/0:6,0:9:9.03:0,9,265	./.	./.	1/1:16,13:31:15:244,15,0	0/0:16,0:21:11.75:0,12,333	0/0:16,0:15:14.79:0,15,380	0/0:21,0:21:8.05:0,8,112	0/0:14,0:13:15.05:0,15,375	0/0:24,0:24:26.51:0,27,517	0/0:23,0:23:27.07:0,27,691	1/1:10,7:16:15.05:305,15,0	1/1:5,6:14:21.96:390,22,0	1/1:12,7:20:12.04:224,12,0	0/0:14,0:15:32.24:0,32,803	0/0:15,0:15:18.06:0,18,515	0/0:33,0:35:52.01:0,52,1112	0/1:22,0:24:99:105,0,118	0/0:11,0:13:15.05:0,15,393	0/0:13,0:19:5.05:0,5,85	0/0:15,0:24:14.68:0,15,377	0/0:17,0:17:36.12:0,36,1049	0/0:14,0:21:24.06:0,24,544	0/0:10,0:16:18.05:0,18,425	0/0:14,0:18:36.12:0,36,916	0/0:23,0:23:33.11:0,33,862	0/0:20,0:20:18.53:0,19,516	0/0:7,0:11:6.49:0,6,133
chr10	101690365	.	T	TA	7583.79	PASS	AC=30;AF=0.556;AN=54;BaseQRankSum=0.111;DP=290;FS=0.943;HRun=0;HaplotypeScore=32.7012;InbreedingCoeff=0.9198;MQ=74.85;MQ0=0;MQRankSum=-2.517;QD=43.09;ReadPosRankSum=-0.117;VQSLOD=4.4514;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:48.16:767,48,0	1/1:0,6:6:18.06:287,18,0	0/0:10,0:10:30.09:0,30,393	0/0:7,0:7:16.23:0,16,172	1/1:0,14:14:36.12:574,36,0	0/0:24,0:24:72.23:0,72,984	0/0:8,0:8:24.08:0,24,335	1/1:0,36:36:99:1718,108,0	0/0:9,0:9:27.09:0,27,376	0/0:14,0:14:42.14:0,42,587	0/0:7,0:7:18.06:0,18,252	1/1:0,6:6:12.04:190,12,0	1/1:0,8:8:21.07:335,21,0	1/1:0,7:7:15.05:240,15,0	0/0:8,0:8:24.08:0,24,336	1/1:0,6:6:15.05:240,15,0	0/0:17,0:17:51.17:0,51,712	1/1:0,14:14:36.12:575,36,0	1/1:0,18:18:54.18:853,54,0	1/1:0,11:11:27.09:431,27,0	1/1:0,1:1:3.01:48,3,0	0/0:2,0:2:6.02:0,6,84	0/0:2,0:2:6.02:0,6,84	./.	0/0:6,0:6:15.05:0,15,210	1/1:0,10:10:30.10:477,30,0	1/1:0,16:16:45.15:705,45,0	1/1:0,5:5:9.03:144,9,0
chr10	101690606	.	CTGTGTGTGTGTGTGTGTG	C	420.89	PASS	AB=0.875;AC=7;AF=0.130;AN=54;BaseQRankSum=4.757;DP=360;FS=0.000;HRun=0;HaplotypeScore=152.1882;InbreedingCoeff=-0.0133;MQ=66.33;MQ0=23;MQRankSum=-3.725;QD=7.01;ReadPosRankSum=-0.206;VQSLOD=2.4687;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:13:17.98:18,0,53	1/1:3,2:5:2.94:18,3,0	./.	0/0:23,0:9:3.01:0,3,42	0/0:11,0:11:12.04:0,12,376	0/0:10,0:8:6.02:0,6,351	0/0:17,0:15:9.23:0,9,186	0/0:32,0:32:13.50:0,13,403	0/0:12,0:12:20.90:0,21,1329	0/0:12,0:12:18.53:0,19,731	0/0:11,0:10:2.92:0,3,216	0/0:12,0:10:15.05:0,15,580	0/0:8,0:8:13.29:0,13,430	0/0:10,0:10:3.48:0,3,51	0/0:12,0:12:15.05:0,15,824	0/1:8,5:14:11.46:172,0,11	0/0:17,0:16:21.04:0,21,1104	0/1:9,0:9:99:189,0,132	0/0:7,0:7:4.82:0,5,17	0/0:13,0:15:3:0,3,25	0/0:9,0:12:6.02:0,6,111	0/0:6,0:6:6.49:0,6,415	0/0:8,0:8:15.05:0,15,783	0/0:17,0:14:12.04:0,12,736	0/0:10,0:10:21.07:0,21,1308	0/0:9,0:11:8.98:0,9,199	0/1:10,0:10:14.09:109,0,14	0/1:5,0:5:36.58:37,0,37
chr10	101690645	.	TGTGTGTGTGTGA	T	616.56	PASS	AB=1.000;AC=15;AF=0.300;AN=50;BaseQRankSum=4.726;DP=356;FS=5.745;HRun=0;HaplotypeScore=91.3179;InbreedingCoeff=0.3228;MQ=31.69;MQ0=99;MQRankSum=-2.935;QD=4.57;ReadPosRankSum=-0.589;VQSLOD=1.3529;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:17:1.55:0,2,4	./.	./.	./.	0/0:14,0:13:5.95:0,6,59	0/0:16,0:9:9.30:0,9,194	0/0:26,0:12:5.08:0,5,70	1/1:18,0:17:5.59:63,6,0	0/0:14,0:10:20.63:0,21,621	0/0:12,0:10:23.44:0,23,509	0/0:4,0:3:3.01:0,3,122	0/1:14,0:11:9.70:10,0,122	0/1:11,0:9:5.30:5,0,26	0/0:9,0:6:0.47:0,0,1	0/0:11,0:11:15.52:0,16,334	1/1:15,0:10:3.08:71,3,0	0/0:19,0:15:5.17:0,5,549	0/1:12,0:7:52.49:128,0,52	1/1:8,0:6:2.55:20,3,0	0/0:5,0:5:0:0,0,1	0/1:23,0:11:0:0,0,1	0/0:6,0:4:6.02:0,6,214	0/0:10,0:8:9.03:0,9,389	0/0:27,0:14:12.04:0,12,406	0/0:12,0:9:18.53:0,19,673	0/1:8,0:6:39.72:76,0,40	1/1:9,7:13:8.90:180,9,0	1/1:7,3:5:8.24:203,8,0
chr10	101691921	.	A	ATATGTATG	7633.23	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=1.829;DP=895;FS=3.522;HRun=0;HaplotypeScore=252.7465;InbreedingCoeff=0.8578;MQ=57.15;MQ0=6;MQRankSum=-9.695;QD=17.19;ReadPosRankSum=-3.399;VQSLOD=3.5335;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:31:6.01:0,6,96	0/0:2,0:10:21.07:0,21,391	1/1:24,0:20:0.89:2,1,0	0/0:29,0:22:2.99:0,3,23	1/1:22,13:39:2.99:24,3,0	0/0:38,0:37:78.23:0,78,1792	0/0:26,0:27:33.08:0,33,672	1/1:60,0:58:51.10:868,51,0	0/0:46,0:46:75.24:0,75,1743	0/0:32,0:32:45.14:0,45,998	0/0:34,0:34:51.16:0,51,1144	1/1:21,19:46:15.01:413,15,0	1/1:23,11:39:21.01:655,21,0	1/1:13,12:31:12.04:489,12,0	0/0:30,0:31:69.18:0,69,1430	0/0:10,0:26:20.94:0,21,350	0/0:32,0:32:47.29:0,47,1193	1/1:15,0:23:17.96:147,18,0	1/1:24,0:21:12.04:451,12,0	1/1:28,0:28:6.02:219,6,0	1/1:34,0:41:2.35:24,2,0	0/0:28,0:29:33.11:0,33,732	0/0:27,0:28:42.14:0,42,1006	0/0:25,0:25:45.15:0,45,1085	0/0:33,0:33:57.17:0,57,1292	1/1:28,0:36:54.64:1645,55,0	1/1:25,0:28:27.09:1040,27,0	1/1:23,0:23:42.14:1654,42,0
chr10	101691942	.	T	TATGTATGT	6919.87	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=0.266;DP=864;FS=2.972;HRun=0;HaplotypeScore=246.0627;InbreedingCoeff=0.8663;MQ=52.63;MQ0=5;MQRankSum=-9.236;QD=15.66;ReadPosRankSum=-0.205;VQSLOD=3.7611;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:5.98:0,6,96	0/0:11,0:11:21.07:0,21,391	1/1:25,0:17:0.89:2,1,0	0/0:23,0:16:2.99:0,3,23	1/1:37,0:37:2.99:24,3,0	0/0:40,0:39:78.23:0,78,1792	0/0:23,0:23:33.08:0,33,672	1/1:54,0:53:15.01:185,15,0	0/0:46,0:46:75.24:0,75,1743	0/0:29,0:29:45.14:0,45,998	0/0:28,0:28:51.16:0,51,1144	1/1:41,0:41:15.01:413,15,0	1/1:39,0:39:21.01:655,21,0	1/1:35,0:35:12.04:489,12,0	0/0:28,0:28:69.18:0,69,1430	0/0:22,0:22:20.94:0,21,350	0/0:30,0:30:47.29:0,47,1193	1/1:24,0:23:17.96:147,18,0	1/1:23,0:20:14.74:458,15,0	1/1:35,0:35:6.02:219,6,0	1/1:42,0:42:4.96:141,5,0	0/0:20,0:20:33.11:0,33,732	0/0:31,0:31:42.14:0,42,1006	0/0:29,0:29:27.19:0,27,1064	0/0:33,0:33:57.17:0,57,1292	1/1:39,0:39:52.98:1612,53,0	1/1:24,0:24:24.55:919,25,0	1/1:18,4:23:42.14:1654,42,0
chr10	101691947	.	A	ATGTATGTA	6919.87	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-0.275;DP=864;FS=2.271;HRun=0;HaplotypeScore=247.4941;InbreedingCoeff=0.8785;MQ=54.53;MQ0=5;MQRankSum=-8.581;QD=15.76;ReadPosRankSum=-0.875;VQSLOD=3.8889;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:14.74:0,15,165	0/0:11,0:11:21.07:0,21,391	1/1:25,0:17:0.89:2,1,0	0/0:24,0:17:2.99:0,3,23	1/1:35,0:35:2.99:24,3,0	0/0:40,0:39:78.23:0,78,1792	0/0:25,0:25:33.08:0,33,672	1/1:54,0:53:15.01:185,15,0	0/0:48,0:48:75.24:0,75,1743	0/0:31,0:31:45.14:0,45,998	0/0:27,0:27:51.16:0,51,1144	1/1:40,0:40:15.01:413,15,0	1/1:37,0:37:21.01:655,21,0	1/1:37,0:37:12.04:489,12,0	0/0:30,0:30:69.18:0,69,1430	0/0:22,0:22:20.94:0,21,350	0/0:30,0:30:51.12:0,51,1213	1/1:22,0:21:17.96:147,18,0	1/1:25,0:22:14.74:458,15,0	1/1:28,7:36:6.02:219,6,0	1/1:42,0:42:4.96:141,5,0	0/0:19,0:19:33.11:0,33,732	0/0:32,0:32:42.14:0,42,1006	0/0:28,0:28:45.15:0,45,1085	0/0:33,0:33:57.17:0,57,1292	1/1:41,0:41:52.98:1612,53,0	1/1:24,0:24:24.55:919,25,0	1/1:21,0:21:42.14:1654,42,0
chr10	101691961	.	G	GTAT	1916.70	PASS	AB=0.907;AC=11;AF=0.196;AN=56;BaseQRankSum=13.905;DP=810;FS=4.921;HRun=0;HaplotypeScore=182.6929;InbreedingCoeff=-0.0185;MQ=64.15;MQ0=0;MQRankSum=-12.836;QD=7.15;ReadPosRankSum=-3.643;VQSLOD=2.4487;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:48.06:0,48,650	0/0:11,0:11:27.09:0,27,342	0/0:35,0:30:80.39:0,80,1170	0/0:28,0:26:75.24:0,75,1097	0/1:24,2:26:52.42:52,0,312	0/0:39,0:39:99:0,114,1952	0/0:24,0:24:72.22:0,72,1156	0/0:37,0:37:75.87:0,76,1215	0/0:42,0:42:99:0,126,2140	0/0:30,0:30:90.29:0,90,1443	0/0:31,0:31:90.28:0,90,1469	0/1:33,0:33:99:155,0,305	0/1:32,0:32:99:100,0,703	0/1:35,0:35:99:113,0,738	0/0:39,0:39:99:0,114,1938	0/0:26,0:26:51.17:0,51,698	0/0:29,0:29:84.19:0,84,1363	0/1:16,0:16:99:113,0,316	0/1:19,2:21:77.64:78,0,504	0/1:23,6:29:99:120,0,603	0/0:38,1:39:23.09:0,23,586	0/0:19,0:19:51.64:0,52,864	0/0:28,0:28:81.28:0,81,1346	0/0:31,0:31:87.30:0,87,1466	0/0:31,0:31:93.31:0,93,1570	0/1:25,10:35:99:373,0,667	0/1:14,8:23:99:356,0,305	1/1:5,13:18:35:611,35,0
chr10	101691963	.	T	TATGGG	2621.35	PASS	AB=0.923;AC=12;AF=0.214;AN=56;BaseQRankSum=8.664;DP=808;FS=10.470;HRun=0;HaplotypeScore=206.9261;InbreedingCoeff=-0.0488;MQ=64.23;MQ0=0;MQRankSum=-7.498;QD=8.24;ReadPosRankSum=-2.282;VQSLOD=1.2433;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:37.31:0,37,848	0/0:11,0:11:27.09:0,27,544	0/0:35,0:30:77.33:0,77,1370	0/0:28,0:26:78.11:0,78,1306	0/0:24,1:26:33.49:0,33,510	0/0:39,0:39:99:0,117,2418	0/0:25,0:25:75.19:0,75,1483	0/1:37,0:37:35.52:36,0,187	0/0:43,0:43:99:0,126,2700	0/0:27,0:27:81.27:0,81,1753	0/0:31,0:31:90.15:0,90,1732	0/1:32,0:32:48.46:48,0,479	0/1:34,0:34:68.89:69,0,1025	0/1:37,0:37:34.03:34,0,1103	0/0:40,0:40:99:0,117,2527	0/0:26,0:26:65.91:0,66,1044	0/0:29,0:29:87.17:0,87,1699	0/1:16,0:16:4.02:4,0,417	0/1:19,2:21:99:237,0,103	0/1:23,6:29:99:110,0,148	0/1:35,1:36:34.87:35,0,124	0/0:18,0:18:52.41:0,52,1090	0/0:27,0:27:81.26:0,81,1714	0/0:31,0:31:90.29:0,90,1917	0/0:30,0:30:90.28:0,90,1894	0/1:25,10:35:92.37:803,0,92	0/1:15,8:23:73.58:475,0,74	1/1:5,13:18:45.01:926,45,0
chr10	101692280	.	A	AG	763.86	PASS	AB=0.989;AC=8;AF=0.143;AN=56;BaseQRankSum=-1.519;DP=533;FS=3.177;HRun=8;HaplotypeScore=60.5715;InbreedingCoeff=0.6991;MQ=78.14;MQ0=5;MQRankSum=0.906;QD=6.47;ReadPosRankSum=1.847;VQSLOD=0.3384;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,18:24:39.10:434,39,0	1/1:3,4:7:9.02:104,9,0	0/1:42,0:24:21.11:21,0,115	0/1:29,0:19:3.80:4,0,92	0/0:28,0:28:78.03:0,78,711	0/0:22,0:23:59.06:0,59,527	0/0:9,0:9:27:0,27,242	0/0:17,2:19:24.02:0,24,208	0/0:23,0:23:60.01:0,60,541	0/0:15,0:15:36:0,36,325	0/0:16,0:16:48.03:0,48,438	0/0:19,0:19:57.01:0,57,512	0/0:18,0:18:44.05:0,44,386	0/0:21,0:21:56.99:0,57,514	0/0:22,0:22:54.03:0,54,494	1/1:1,14:15:30.09:346,30,0	0/0:21,0:21:42.01:0,42,383	0/0:20,0:20:48.02:0,48,439	0/0:19,0:19:38.93:0,39,342	0/0:19,0:19:36.17:0,36,339	0/0:14,0:14:38.98:0,39,346	0/0:14,0:14:39.01:0,39,352	0/0:19,0:19:48.01:0,48,434	0/0:13,0:13:36.01:0,36,329	0/0:24,0:24:59.99:0,60,536	0/0:15,0:15:33.01:0,33,302	0/0:22,0:22:63.01:0,63,570	0/0:2,0:2:6:0,6,55
chr10	101693233	.	CCTGTCA	C	2837.94	PASS	AB=0.941;AC=7;AF=0.125;AN=56;BaseQRankSum=7.458;DP=586;FS=0.000;HRun=0;HaplotypeScore=134.8679;InbreedingCoeff=0.8071;MQ=83.07;MQ0=0;MQRankSum=-11.288;QD=36.86;ReadPosRankSum=0.736;VQSLOD=3.5064;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:63.17:1411,63,0	1/1:1,7:8:21.07:483,21,0	0/0:17,0:17:39.13:0,39,1267	0/0:18,0:18:42.14:0,42,1262	0/0:19,0:19:57.18:0,57,1880	0/0:18,0:18:54.19:0,54,1908	0/0:26,0:26:78.27:0,78,2724	0/0:21,0:21:51.14:0,51,1158	0/1:15,1:16:24.78:25,0,1406	0/0:20,0:19:60.21:0,60,2073	0/0:21,0:21:63.22:0,63,2209	0/0:20,0:20:51.17:0,51,1764	0/0:39,0:39:99:0,117,3862	0/0:15,0:15:42.13:0,42,1358	0/0:16,0:16:48.16:0,48,1672	1/1:3,18:21:47.77:1067,48,0	0/0:29,0:29:84.29:0,84,2942	0/0:20,0:20:51.14:0,51,1717	0/0:25,0:25:60.16:0,60,1394	0/0:15,0:15:45.15:0,45,1206	0/0:43,0:43:99:0,116,3015	0/0:14,0:14:36.12:0,36,1213	0/0:19,0:19:54.19:0,54,1880	0/0:44,0:44:99:0,129,4448	0/0:20,0:20:54.19:0,54,1818	0/0:15,0:15:45.15:0,45,1162	0/0:13,0:13:23.55:0,24,652	0/0:2,0:2:6.02:0,6,157
chr10	101693506	.	CAA	C	1701.83	PASS	AB=0.945;AC=11;AF=0.196;AN=56;BaseQRankSum=1.101;DP=565;FS=0.992;HRun=12;HaplotypeScore=85.9253;InbreedingCoeff=0.8543;MQ=64.66;MQ0=15;MQRankSum=0.528;QD=12.61;ReadPosRankSum=0.198;VQSLOD=2.3784;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:23:50.99:0,51,509	0/0:3,0:10:24.03:0,24,239	0/0:45,0:13:13.60:0,14,214	0/1:47,0:23:32.50:32,0,40	0/0:4,0:17:11.54:0,12,207	0/0:15,0:18:42.10:0,42,550	0/0:23,0:22:57.18:0,57,830	1/1:7,10:17:30.46:294,30,0	0/0:10,0:10:20.56:0,21,275	0/0:29,0:29:69.22:0,69,1006	0/0:23,0:23:63.21:0,63,939	0/0:8,0:12:18.95:0,19,219	0/0:11,0:16:24.40:0,24,327	0/0:7,0:13:33.91:0,34,340	0/0:27,1:29:41.19:0,41,917	0/0:5,0:19:36.01:0,36,334	0/0:28,0:32:63.13:0,63,999	0/0:6,0:18:25.26:0,25,92	1/1:7,9:15:30.03:305,30,0	1/1:3,19:22:51.10:516,51,0	1/1:3,7:10:21.02:214,21,0	0/0:7,0:9:23.56:0,24,305	0/0:21,0:20:26.71:0,27,734	0/0:10,0:10:24.08:0,24,357	0/0:18,0:20:50.58:0,51,681	0/0:9,1:26:24.41:0,24,264	1/1:0,18:18:51.11:519,51,0	0/0:2,0:5:7.49:0,7,27
chr10	101694851	.	A	AC	8402.62	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=-15.136;DP=605;FS=1.000;HRun=1;HaplotypeScore=69.1754;InbreedingCoeff=0.8484;MQ=72.60;MQ0=1;MQRankSum=-1.289;QD=31.01;ReadPosRankSum=-0.827;VQSLOD=4.3090;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:31:84.28:1199,84,0	1/1:0,11:11:30.10:429,30,0	0/0:13,0:14:25.93:0,26,381	0/0:22,0:21:25.91:0,26,439	0/0:35,0:35:36.11:0,36,138	0/0:14,0:14:42.07:0,42,524	0/0:21,0:21:60.14:0,60,740	1/1:1,38:39:99:1443,114,0	0/0:19,0:19:52.41:0,52,683	0/0:28,0:28:81.26:0,81,1116	0/0:27,0:27:81.07:0,81,1059	0/1:28,0:28:50.59:69,0,51	0/1:15,0:15:35.72:43,0,36	0/0:21,0:21:34.47:0,34,98	0/0:23,0:23:63.16:0,63,786	1/1:0,24:24:60.20:857,60,0	0/0:26,0:26:72.14:0,72,871	0/0:19,0:19:33.11:0,33,97	1/1:6,15:21:59.64:776,60,0	1/1:0,29:29:81.11:1085,81,0	1/1:0,18:18:36.12:514,36,0	0/0:20,0:20:50.79:0,51,731	0/0:11,0:11:33.10:0,33,430	0/0:10,0:10:30.09:0,30,401	0/0:23,0:23:52.23:0,52,872	1/1:1,25:26:36.36:989,36,0	1/1:1,20:21:54.07:741,54,0	1/1:0,7:7:18.06:257,18,0
chr10	101696495	.	CCTT	C	3061.22	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.126;DP=549;FS=2.881;HRun=0;HaplotypeScore=82.7128;InbreedingCoeff=0.9971;MQ=78.83;MQ0=0;MQRankSum=-4.941;QD=36.01;ReadPosRankSum=3.420;VQSLOD=4.4351;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,2435	0/0:8,0:8:18.03:0,18,316	0/0:18,0:18:42.25:0,42,868	0/0:19,0:20:25.91:0,26,839	1/1:1,26:27:69.24:1124,69,0	0/0:20,0:20:60.21:0,60,1321	0/0:23,0:23:66.21:0,66,1432	0/0:26,0:26:75.26:0,75,1676	0/0:17,0:17:48.16:0,48,1052	0/0:29,0:28:87.29:0,87,1860	0/0:15,0:15:42.13:0,42,888	1/1:2,19:21:48.16:783,48,0	1/1:3,13:16:33.11:539,33,0	1/1:3,18:21:48.16:776,48,0	0/0:16,0:16:45.14:0,45,962	0/0:17,0:17:51.16:0,51,1096	0/0:25,0:25:69.22:0,69,1498	0/0:21,0:21:57.18:0,57,1230	0/0:17,0:17:48.15:0,48,1017	0/0:22,0:22:63.19:0,63,1307	0/0:17,0:17:51.14:0,51,1053	0/0:10,0:10:30.09:0,30,628	0/0:23,0:23:69.22:0,69,1491	0/0:12,0:12:36.12:0,36,803	0/0:23,0:23:69.24:0,69,1541	0/0:15,0:15:42.13:0,42,841	0/0:16,0:16:42.14:0,42,919	0/0:15,0:15:45.15:0,45,986
chr10	101696684	.	TTG	T	729.13	PASS	AB=0.925;AC=22;AF=0.440;AN=50;BaseQRankSum=0.937;DP=519;FS=29.943;HRun=0;HaplotypeScore=78.1315;InbreedingCoeff=0.5194;MQ=64.58;MQ0=8;MQRankSum=1.981;QD=3.65;ReadPosRankSum=0.707;VQSLOD=0.4154;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:40:15.23:0,15,362	0/0:4,0:4:6.02:0,6,88	./.	./.	0/0:19,0:19:6:0,6,53	0/0:11,0:11:3.33:0,3,45	0/1:28,6:34:33.42:33,0,213	0/0:30,0:28:7.09:0,7,36	1/1:6,3:9:3:32,3,0	1/1:17,2:18:21.41:183,21,0	1/1:6,2:8:6.02:65,6,0	./.	0/0:15,0:14:14.97:0,15,163	0/0:14,0:19:8.96:0,9,84	1/1:9,9:18:15.04:162,15,0	0/1:21,0:20:31.05:31,0,222	0/0:33,1:33:3.57:0,4,337	1/1:12,0:19:1.82:5,2,0	0/0:27,0:27:30.64:0,31,231	0/0:7,0:7:3.01:0,3,39	0/0:25,0:25:11.92:0,12,118	1/1:19,0:19:9:78,9,0	1/1:8,0:11:2.84:14,3,0	1/1:8,7:15:18.18:158,18,0	1/1:10,2:11:11.86:111,12,0	1/1:13,0:13:3:26,3,0	0/0:18,0:22:5.75:0,6,39	0/0:4,0:4:5.97:0,6,45
chr10	101697696	.	GCACACACACACACACACA	G	4171.11	PASS	AB=0.698;AC=13;AF=0.232;AN=56;BaseQRankSum=9.014;DP=672;FS=1.423;HRun=0;HaplotypeScore=293.1251;InbreedingCoeff=0.7912;MQ=68.95;MQ0=8;MQRankSum=-5.503;QD=27.99;ReadPosRankSum=-0.535;VQSLOD=1.9652;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:43:48.12:0,48,2726	0/0:10,0:14:24.08:0,24,1484	0/0:27,0:23:6.02:0,6,337	0/0:27,0:21:2.98:0,3,21	0/0:11,0:20:12.02:0,12,387	0/0:17,0:17:33.11:0,33,2382	0/0:35,0:35:45.63:0,46,3149	1/1:18,5:23:14.79:154,15,0	0/0:34,0:41:81.23:0,81,5389	0/0:14,0:14:36.12:0,36,2482	0/0:10,0:9:21.07:0,21,1749	0/0:22,0:22:12.02:0,12,739	0/0:18,0:23:27.09:0,27,1624	0/0:18,0:18:14.04:0,14,650	0/0:25,0:25:57.20:0,57,3344	0/0:16,0:34:40.11:0,40,2801	0/0:25,0:28:52.73:0,53,3163	0/0:17,0:20:40.95:0,41,3054	1/1:11,6:17:11.95:334,12,0	1/1:17,12:30:21.50:755,21,0	0/1:17,13:29:58.46:138,0,58	0/0:22,0:26:39.10:0,39,2093	0/0:25,0:26:48.16:0,48,3476	0/0:30,0:33:51.18:0,51,3711	0/0:16,0:16:36.59:0,37,2696	1/1:6,8:14:23.82:949,24,0	1/1:13,13:27:36.12:1695,36,0	1/1:2,6:8:3.48:147,3,0
chr10	101699514	.	A	AAC	4611.44	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-7.836;DP=630;FS=0.000;HRun=0;HaplotypeScore=92.6702;InbreedingCoeff=0.5499;MQ=63.70;MQ0=11;MQRankSum=2.692;QD=17.08;ReadPosRankSum=0.592;VQSLOD=4.4507;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:29:72.80:73,0,260	0/1:13,0:13:99:140,0,104	0/0:54,0:10:3.43:0,3,88	0/1:46,0:19:20.22:20,0,78	0/0:24,0:24:33.90:0,34,180	0/0:20,0:20:56.98:0,57,713	0/0:20,0:20:57.16:0,57,795	1/1:9,25:34:65.18:869,65,0	0/0:17,0:17:51.12:0,51,656	0/0:21,0:21:54.12:0,54,636	0/0:15,0:15:41.66:0,42,555	0/1:16,0:16:32.44:32,0,67	0/0:14,0:14:10.18:0,10,97	0/0:19,0:19:3.18:0,3,117	0/0:27,0:27:74.91:0,75,970	0/1:21,0:21:99:168,0,286	0/0:25,0:25:71.41:0,71,942	0/0:26,0:26:59.14:0,59,633	1/1:3,17:20:50.96:572,51,0	1/1:0,18:18:51.02:714,51,0	1/1:1,12:13:26.88:395,27,0	0/0:17,0:17:50.91:0,51,592	0/0:26,0:26:36.17:0,36,860	0/0:14,0:14:38.98:0,39,527	0/0:21,0:21:48.36:0,48,728	1/1:4,28:31:35.69:918,36,0	1/1:0,18:19:30.06:471,30,0	1/1:3,5:8:15.51:239,16,0
chr10	101699515	.	A	AC	1440.66	PASS	AB=0.982;AC=20;AF=0.357;AN=56;BaseQRankSum=7.372;DP=631;FS=5.312;HRun=0;HaplotypeScore=93.6572;InbreedingCoeff=0.2687;MQ=65.73;MQ0=11;MQRankSum=1.716;QD=4.41;ReadPosRankSum=1.758;VQSLOD=2.8928;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:28:26.40:26,0,251	0/1:13,0:13:52.18:52,0,84	0/0:58,0:14:12.69:0,13,100	0/1:46,0:19:4.15:4,0,91	0/1:23,1:24:15.64:16,0,60	0/0:20,0:20:57.58:0,58,680	0/0:19,0:19:57.15:0,57,726	0/1:27,2:30:18.04:252,0,18	0/0:17,0:17:50.98:0,51,572	0/0:20,0:20:57.08:0,57,611	0/0:16,0:16:41.85:0,42,512	0/1:18,0:18:7.43:53,0,7	0/1:14,0:14:6.51:7,0,34	0/1:18,1:19:10.18:10,0,36	0/0:26,0:26:70.10:0,70,867	0/1:22,0:22:47.09:47,0,245	0/0:26,0:26:72.17:0,72,869	0/0:24,0:24:53.31:0,53,560	0/1:18,0:18:21.73:99,0,22	1/1:19,0:19:45.32:250,45,0	1/1:12,1:13:26.20:163,26,0	0/0:17,0:17:48.88:0,49,546	0/0:26,0:26:71.57:0,72,810	0/0:14,0:14:36.57:0,37,463	0/0:21,0:21:61.25:0,61,707	1/1:33,2:34:26.69:396,27,0	1/1:19,0:19:28.62:151,29,0	1/1:8,0:8:17.46:102,17,0
chr10	101700065	.	C	CTT	5932.96	PASS	AB=0.709;AC=27;AF=0.482;AN=56;BaseQRankSum=-2.030;DP=551;FS=0.000;HRun=11;HaplotypeScore=78.6447;InbreedingCoeff=0.7153;MQ=70.18;MQ0=1;MQRankSum=-2.163;QD=20.89;ReadPosRankSum=-0.546;VQSLOD=4.0747;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:18:7.90:446,8,0	1/1:1,10:12:29.59:400,30,0	0/0:16,0:15:2.21:0,2,159	0/1:17,0:16:14.57:15,0,155	1/1:5,0:23:3.30:128,3,0	0/0:27,0:28:80.82:0,81,762	0/0:19,0:19:44.78:0,45,416	1/1:5,23:31:75.16:1018,75,0	0/0:13,0:13:29.78:0,30,274	0/0:26,0:26:54:0,54,519	0/0:35,0:39:65.68:0,66,825	1/1:2,2:17:33.57:183,34,0	0/1:5,0:23:19.39:79,0,19	1/1:3,0:16:5.95:80,6,0	0/0:13,0:15:38.79:0,39,361	1/1:3,12:16:36.10:487,36,0	0/0:19,0:22:47.50:0,47,421	0/0:8,0:8:21:0,21,202	1/1:6,3:14:25.08:224,25,0	1/1:2,20:25:66.96:837,67,0	1/1:0,7:7:11.99:150,12,0	0/0:15,0:16:38.74:0,39,355	0/0:18,0:19:44.88:0,45,457	0/0:10,0:12:23.66:0,24,256	0/0:33,0:34:80.80:0,81,761	0/1:7,21:30:9.55:845,0,10	1/1:4,18:24:55.85:753,56,0	1/1:0,8:9:21.07:289,21,0
chr10	101700863	.	TAC	T	562.88	PASS	AB=0.897;AC=28;AF=0.560;AN=50;BaseQRankSum=6.139;DP=437;FS=11.145;HRun=0;HaplotypeScore=65.7719;InbreedingCoeff=0.1115;MQ=57.64;MQ0=17;MQRankSum=-1.608;QD=2.19;ReadPosRankSum=-0.422;VQSLOD=0.5699;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:22:0:0,0,0	1/1:5,0:9:5.68:28,6,0	./.	./.	0/0:14,4:18:2.98:0,3,21	0/1:21,3:23:52.44:52,0,66	0/1:17,1:19:28.32:28,0,138	./.	0/1:12,1:12:20.23:20,0,82	0/0:11,0:11:6.02:0,6,89	0/0:6,0:6:6.01:0,6,68	1/1:10,4:13:5.80:88,6,0	1/1:10,2:12:9.02:93,9,0	0/0:15,0:15:14.97:0,15,151	0/1:13,3:16:17.19:17,0,162	1/1:2,0:6:8.52:42,9,0	0/0:21,0:21:29.98:0,30,335	0/1:13,1:14:17.19:17,0,132	1/1:5,2:9:11.70:92,12,0	1/1:7,0:12:5.68:28,6,0	1/1:20,0:27:2.84:14,3,0	0/1:7,2:10:49.44:49,0,117	0/0:11,0:11:9.03:0,9,131	0/1:21,1:24:34.16:34,0,245	0/1:18,1:19:20.20:20,0,119	1/1:8,0:11:6.15:29,6,0	1/1:8,0:10:5.66:28,6,0	1/1:4,0:7:8.52:42,9,0
chr10	101701894	.	C	CA	2470.61	PASS	AB=0.875;AC=9;AF=0.161;AN=56;BaseQRankSum=-7.379;DP=578;FS=4.071;HRun=8;HaplotypeScore=58.3310;InbreedingCoeff=0.8648;MQ=83.59;MQ0=0;MQRankSum=-1.781;QD=25.47;ReadPosRankSum=2.870;VQSLOD=4.6060;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,1002	0/1:6,1:7:13.60:14,0,144	0/0:19,0:19:27.58:0,28,304	0/0:19,0:18:39.84:0,40,333	1/1:3,15:18:45.13:519,45,0	0/0:16,0:16:45.02:0,45,411	0/0:29,0:29:74.97:0,75,673	0/0:27,0:27:66.03:0,66,604	0/0:16,0:16:44.99:0,45,402	0/0:29,0:29:69.03:0,69,632	0/0:15,0:16:41.05:0,41,363	1/1:3,28:31:78.23:900,78,0	1/1:2,20:22:60.17:683,60,0	1/1:2,17:19:45.13:519,45,0	0/0:15,0:15:36.02:0,36,329	0/0:26,0:26:72.04:0,72,659	0/0:31,0:30:77.98:0,78,706	0/0:22,0:22:60.03:0,60,549	0/0:17,0:17:45.01:0,45,412	0/0:22,0:22:66.02:0,66,599	0/0:10,0:10:27.01:0,27,247	0/0:14,0:14:39.02:0,39,357	0/0:14,0:14:30.01:0,30,275	0/0:27,0:27:72.88:0,73,650	0/0:16,0:16:42.02:0,42,384	0/0:19,0:19:48.02:0,48,439	0/0:32,0:33:92.07:0,92,830	0/0:4,0:4:12.01:0,12,109
chr10	101703930	.	A	AATAC	1359.52	PASS	AB=0.946;AC=10;AF=0.192;AN=52;BaseQRankSum=-2.976;DP=609;FS=8.506;HRun=0;HaplotypeScore=125.1081;InbreedingCoeff=0.2380;MQ=64.22;MQ0=4;MQRankSum=-1.345;QD=7.04;ReadPosRankSum=-5.383;VQSLOD=-0.4545;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:19.17:0,19,472	0/0:7,0:7:12.04:0,12,185	./.	./.	0/0:23,0:23:35.94:0,36,482	0/0:31,0:31:42.09:0,42,570	0/0:19,0:19:18.36:0,18,303	1/1:41,0:40:14.78:96,15,0	0/0:18,0:18:39.07:0,39,498	0/0:22,0:22:41.70:0,42,522	0/0:24,0:24:48.14:0,48,666	0/0:17,0:17:24.08:0,24,370	0/0:14,0:14:15.03:0,15,192	0/0:18,0:18:15.04:0,15,212	0/0:24,0:24:48.10:0,48,618	0/0:19,0:18:24.98:0,25,394	1/1:11,14:24:27.09:632,27,0	0/0:23,0:23:9.63:0,10,223	0/1:16,0:15:32.94:33,0,115	0/1:27,0:27:99:106,0,159	0/1:14,0:14:46.98:47,0,87	0/1:11,9:21:16.30:488,0,16	0/0:17,0:17:24.08:0,24,370	0/0:19,0:19:24.07:0,24,350	0/0:28,0:28:60.17:0,60,831	0/0:33,0:33:72.01:0,72,667	0/1:33,0:33:43.70:44,0,146	0/1:16,0:16:65.93:66,0,147
chr10	101704314	.	TC	T	1660.11	PASS	AB=0.989;AC=17;AF=0.304;AN=56;BaseQRankSum=7.868;DP=510;FS=0.428;HRun=11;HaplotypeScore=74.7514;InbreedingCoeff=0.7044;MQ=85.29;MQ0=2;MQRankSum=-1.477;QD=7.55;ReadPosRankSum=5.515;VQSLOD=1.9655;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:32.06:126,32,0	1/1:9,0:9:5.81:23,6,0	0/1:32,0:28:31.44:31,0,260	0/1:26,1:25:29.15:29,0,102	1/1:6,21:28:42.98:422,43,0	0/0:20,0:20:34.66:0,35,344	0/0:13,1:15:10.95:0,11,275	0/1:12,0:13:3.31:3,0,78	0/0:18,1:19:16.21:0,16,330	0/0:15,0:15:32.76:0,33,295	0/0:10,0:10:23.92:0,24,232	1/1:5,24:31:63.79:493,64,0	1/1:4,15:19:32.95:271,33,0	1/1:3,12:15:32.96:271,33,0	0/0:14,0:14:20.96:0,21,261	1/1:23,0:23:38.76:185,39,0	0/0:21,0:21:46.48:0,46,435	0/0:2,0:9:5.72:0,6,29	0/0:11,0:11:20.23:0,20,199	0/0:10,0:11:23.86:0,24,210	0/0:18,0:18:42.01:0,42,405	0/0:19,1:20:5.49:0,5,212	0/0:17,0:17:29.92:0,30,272	0/0:23,0:23:55.13:0,55,509	0/0:10,0:10:23.96:0,24,221	0/0:19,0:19:28.88:0,29,229	0/0:30,0:29:68.70:0,69,652	0/0:7,0:7:12.01:0,12,118
chr10	101704323	.	C	CA	428.84	PASS	AB=0.583;AC=3;AF=0.054;AN=56;BaseQRankSum=6.441;DP=522;FS=1.637;HRun=0;HaplotypeScore=83.2097;InbreedingCoeff=0.6339;MQ=81.18;MQ0=2;MQRankSum=-2.910;QD=13.40;ReadPosRankSum=3.689;VQSLOD=4.6036;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:37.63:0,38,219	0/1:2,5:7:6.36:25,0,6	0/0:33,0:28:64.02:0,64,626	0/0:23,0:20:16.22:0,16,272	0/0:28,0:28:70.79:0,71,473	0/0:16,0:16:48.10:0,48,586	0/0:15,0:15:36.83:0,37,482	0/0:14,0:14:19.84:0,20,198	0/0:21,0:21:57.06:0,57,679	0/0:18,0:18:47.90:0,48,542	0/0:12,0:12:33.04:0,33,403	0/0:31,0:31:70.58:0,71,462	0/0:16,0:16:34.97:0,35,220	0/0:17,0:17:41.29:0,41,269	0/0:17,0:17:47.82:0,48,523	1/1:6,18:25:44.82:509,45,0	0/0:26,0:26:51.95:0,52,721	0/0:13,0:12:2.25:0,2,34	0/0:10,0:10:27.08:0,27,352	0/0:17,0:17:45.03:0,45,484	0/0:18,0:18:45.13:0,45,574	0/0:21,0:21:47.96:0,48,529	0/0:15,0:15:36.08:0,36,443	0/0:24,0:24:69.17:0,69,856	0/0:10,0:10:30.07:0,30,365	0/0:21,0:21:57.10:0,57,633	0/0:26,0:25:68.09:0,68,925	0/0:6,0:6:18.01:0,18,198
chr10	101704324	.	C	CA	827.58	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=7.215;DP=573;FS=10.671;HRun=0;HaplotypeScore=103.3023;InbreedingCoeff=0.7645;MQ=78.79;MQ0=2;MQRankSum=-3.267;QD=14.03;ReadPosRankSum=5.691;VQSLOD=4.6374;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:25:30.07:395,30,0	0/1:7,0:7:5.53:28,0,6	0/0:32,0:28:41.56:0,42,487	0/0:22,0:19:21.87:0,22,226	0/0:32,0:32:73.35:0,73,458	0/0:18,0:18:45.07:0,45,544	0/0:15,0:15:36.79:0,37,470	0/0:13,0:13:20.06:0,20,200	0/0:21,0:21:56.96:0,57,655	0/0:22,0:22:47.96:0,48,541	0/0:17,0:17:36.02:0,36,423	0/0:32,0:32:71.88:0,72,424	0/0:16,0:16:34.60:0,35,204	0/0:20,0:20:42.98:0,43,251	0/0:22,0:22:50.81:0,51,535	1/1:27,0:27:45.48:533,45,0	0/0:30,0:30:60.09:0,60,702	0/0:13,0:12:2.22:0,2,33	0/0:12,0:12:27.08:0,27,345	0/0:23,0:23:44.26:0,44,454	0/0:21,0:21:48.09:0,48,576	0/0:19,0:19:41.88:0,42,444	0/0:15,0:15:39.05:0,39,455	0/0:26,0:26:66.15:0,66,803	0/0:15,0:15:29.99:0,30,356	0/0:24,0:23:48.07:0,48,532	0/0:27,0:26:67.78:0,68,864	0/0:6,0:6:18.01:0,18,197
chr10	101705225	.	T	TTGTG	13321.61	PASS	AB=0.779;AC=28;AF=0.500;AN=56;BaseQRankSum=1.267;DP=850;FS=7.000;HRun=0;HaplotypeScore=178.6087;InbreedingCoeff=0.8746;MQ=61.74;MQ0=12;MQRankSum=-5.757;QD=31.20;ReadPosRankSum=-0.530;VQSLOD=4.2277;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,10:24:38.84:825,39,0	1/1:6,4:11:23.78:460,24,0	0/0:48,0:27:8.65:0,9,164	0/0:35,0:23:29.93:0,30,385	1/1:16,8:26:41.77:969,42,0	0/0:25,0:25:44.83:0,45,672	0/0:27,0:28:52.17:0,52,942	1/1:15,2:35:59.85:781,60,0	0/0:32,0:34:81.18:0,81,1172	0/0:46,0:49:99:0,105,1443	0/0:19,0:22:36.10:0,36,505	1/1:19,15:37:68.69:1389,69,0	1/1:13,16:32:68.69:1423,69,0	1/1:12,19:31:63.22:1456,63,0	0/0:44,0:44:99:0,108,1737	1/1:17,20:40:86.72:1818,87,0	0/0:26,0:27:53.38:0,53,818	1/1:12,5:17:23.42:478,23,0	1/1:20,0:17:21.06:337,21,0	1/1:13,3:23:39.13:733,39,0	1/1:38,1:41:21.90:309,22,0	0/0:34,0:34:78.20:0,78,1198	0/0:25,0:27:54.13:0,54,754	0/0:25,0:25:54.13:0,54,778	0/0:25,0:24:48.16:0,48,762	0/1:35,2:46:1.94:1297,0,2	1/1:14,2:24:47.72:766,48,0	0/1:11,2:16:94.71:279,0,95
chr10	101705284	.	ATG	A	12438.63	PASS	AB=0.806;AC=30;AF=0.536;AN=56;BaseQRankSum=15.393;DP=1026;FS=1.563;HRun=0;HaplotypeScore=209.5073;InbreedingCoeff=0.8608;MQ=55.26;MQ0=13;MQRankSum=0.936;QD=22.13;ReadPosRankSum=0.948;VQSLOD=5.2022;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,27:42:77.97:1054,78,0	1/1:1,9:10:24.08:297,24,0	0/0:42,2:23:23.07:0,23,295	0/0:54,0:33:17.53:0,18,624	1/1:6,29:35:65.76:794,66,0	0/0:29,1:30:35.04:0,35,1047	0/0:36,2:38:6.90:0,7,1116	1/1:13,23:34:69.21:855,69,0	0/0:40,1:41:59.25:0,59,1468	0/0:44,1:45:56.11:0,56,1429	0/0:16,0:16:32.85:0,33,486	1/1:9,37:44:96.30:1190,96,0	1/1:5,40:45:99:1264,102,0	1/1:11,29:40:75.23:929,75,0	0/0:52,2:54:89.21:0,89,1951	1/1:13,41:55:55.01:1291,55,0	0/0:38,0:38:95.68:0,96,1451	1/1:4,17:21:38.92:549,39,0	1/1:4,12:16:33.10:403,33,0	1/1:2,15:15:24.08:297,24,0	1/1:27,55:79:99:1651,126,0	0/1:32,1:34:17.37:17,0,896	0/0:25,0:25:51.17:0,51,831	0/0:48,0:48:99:0,128,2064	0/0:30,1:31:31.73:0,32,1014	1/1:13,24:36:66.20:817,66,0	1/1:5,29:34:75.23:929,75,0	0/1:5,5:9:4.78:100,0,5
chr10	101705462	.	A	ATG	7548.15	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.625;DP=1218;FS=6.553;HRun=0;HaplotypeScore=166.3636;InbreedingCoeff=0.9999;MQ=59.63;MQ0=2;MQRankSum=0.782;QD=36.12;ReadPosRankSum=5.199;VQSLOD=6.3643;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:54:99:0,129,1581	0/0:14,0:14:36.11:0,36,453	0/0:40,0:33:63.15:0,63,759	0/0:50,0:37:63.44:0,63,759	1/1:10,27:36:90.29:1452,90,0	0/0:33,0:33:47.05:0,47,812	0/0:32,0:33:72.23:0,72,908	0/0:52,0:52:99:0,117,1464	0/0:50,0:50:99:0,132,1622	0/0:58,0:58:99:0,159,1972	0/0:28,0:28:69.20:0,69,856	1/1:11,58:71:80.88:2415,81,0	1/1:7,42:49:57.25:1592,57,0	1/1:4,47:52:99:2089,126,0	0/0:57,0:57:99:0,153,1897	0/0:63,0:64:99:0,162,2005	0/0:26,0:27:67.66:0,68,867	0/0:35,0:35:93.26:0,93,1153	0/0:20,0:20:45.12:0,45,541	0/0:37,0:37:93.22:0,93,1105	0/0:100,0:99:99:0,234,2979	0/0:39,0:39:99:0,102,1203	0/0:19,0:19:38.99:0,39,469	0/0:50,0:51:99:0,129,1559	0/0:27,0:27:75.21:0,75,919	0/0:58,0:58:99:0,156,1856	0/0:39,0:38:78.23:0,78,969	0/0:24,0:24:48.04:0,48,541
chr10	101705658	.	CTG	C	1186.71	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.202;DP=1242;FS=0.619;HRun=0;HaplotypeScore=186.5031;InbreedingCoeff=0.9694;MQ=60.71;MQ0=2;MQRankSum=-2.151;QD=31.23;ReadPosRankSum=0.658;VQSLOD=4.7084;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,148,2553	0/0:14,0:14:27.09:0,27,459	0/0:35,0:31:49.06:0,49,800	0/0:40,0:40:78.52:0,79,1238	0/0:24,0:24:60.21:0,60,1016	0/0:30,0:30:66.23:0,66,1114	0/0:50,0:50:99:0,141,2365	0/0:50,0:50:99:0,123,2061	0/0:67,0:67:99:0,184,3061	0/0:54,2:56:72.43:0,72,2308	0/0:26,0:26:60.21:0,60,1015	0/0:65,0:65:99:0,160,2676	0/0:70,0:70:99:0,156,2567	0/0:63,0:63:99:0,163,2739	0/0:52,0:52:99:0,141,2394	0/0:48,0:48:99:0,126,2139	0/0:42,0:42:99:0,108,1828	1/1:4,34:38:96.44:1282,96,0	0/0:23,0:23:57.16:0,57,919	0/0:23,0:23:66.23:0,66,1104	0/0:110,0:111:99:0,204,3345	0/0:49,0:49:99:0,138,2311	0/0:37,0:37:87.28:0,87,1447	0/0:44,0:44:99:0,111,1836	0/0:31,0:31:90.31:0,90,1525	0/0:52,0:52:99:0,141,2360	0/0:32,0:32:81.28:0,81,1377	0/0:9,0:9:12.04:0,12,198
chr10	101705710	.	A	ATG	4223.10	PASS	AB=0.993;AC=8;AF=0.143;AN=56;BaseQRankSum=-9.539;DP=1289;FS=3.419;HRun=0;HaplotypeScore=250.4458;InbreedingCoeff=0.7567;MQ=58.05;MQ0=11;MQRankSum=3.576;QD=18.28;ReadPosRankSum=1.090;VQSLOD=4.5735;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,39:58:76.04:1861,76,0	1/1:4,13:17:36.12:607,36,0	0/1:40,0:12:5.04:5,0,178	0/1:65,0:33:4.55:5,0,409	0/0:28,0:27:63.20:0,63,810	0/0:25,0:25:57.18:0,57,731	0/0:50,0:50:99:0,108,1373	0/0:36,0:37:71.83:0,72,883	0/0:60,0:60:99:0,147,1892	0/0:71,0:71:99:0,199,2533	0/0:22,0:22:66.21:0,66,846	0/0:66,0:66:99:0,138,1775	0/0:69,0:69:99:0,153,1936	0/0:53,0:53:99:0,120,1542	0/0:59,0:59:99:0,159,2040	1/1:7,43:50:37.15:1745,37,0	0/0:46,0:46:99:0,101,1339	0/0:33,0:33:72.23:0,72,923	0/0:24,0:23:42.46:0,42,526	0/0:36,0:36:51.05:0,51,898	0/0:119,0:117:99:0,163,2147	0/0:45,0:45:99:0,111,1406	0/0:29,0:29:63.55:0,64,750	0/0:48,0:48:99:0,120,1544	0/0:33,0:33:77.51:0,78,986	0/0:58,0:58:82.27:0,82,1539	0/0:33,0:32:57.13:0,57,714	0/0:14,0:14:9.80:0,10,363
chr10	101705730	.	A	ATGTG	10751.37	PASS	AB=0.873;AC=24;AF=0.429;AN=56;BaseQRankSum=4.596;DP=1364;FS=16.379;HRun=0;HaplotypeScore=314.7151;InbreedingCoeff=0.7076;MQ=57.51;MQ0=13;MQRankSum=-2.371;QD=13.80;ReadPosRankSum=-2.802;VQSLOD=2.8526;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:52:99:0,115,1809	0/0:15,0:15:33.08:0,33,525	0/1:46,0:17:2.59:3,0,229	0/1:61,0:24:6.81:7,0,192	1/1:10,0:31:1.80:173,2,0	0/0:23,0:24:39.12:0,39,619	0/0:41,0:43:95.25:0,95,1448	1/1:23,24:62:68.72:1871,69,0	0/0:58,0:58:88.29:0,88,2003	0/0:73,0:76:99:0,163,2544	0/0:23,0:23:46.17:0,46,836	1/1:13,0:71:16.26:399,16,0	1/1:16,0:75:84.33:551,84,0	1/1:20,0:57:23.67:285,24,0	0/0:53,0:54:99:0,101,1729	0/0:48,0:49:99:0,108,1762	0/0:51,0:51:75.02:0,75,1775	0/1:12,0:31:22.27:194,0,22	0/1:23,2:23:99:542,0,129	1/1:8,20:40:54.73:855,55,0	1/1:93,37:139:11.31:1816,11,0	0/0:37,0:38:74.82:0,75,1195	0/0:22,0:23:47.76:0,48,761	0/0:48,0:49:99:0,115,1855	0/0:28,0:30:72.37:0,72,1040	1/1:20,35:73:99:2473,142,0	1/1:12,18:37:58.49:1088,58,0	1/1:2,8:18:29.04:496,29,0
chr10	101705794	.	GTA	G	1744.29	PASS	AB=0.991;AC=13;AF=0.232;AN=56;BaseQRankSum=15.556;DP=1301;FS=0.289;HRun=0;HaplotypeScore=239.5241;InbreedingCoeff=0.4898;MQ=55.65;MQ0=25;MQRankSum=-3.842;QD=5.59;ReadPosRankSum=-1.940;VQSLOD=2.7726;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:49,0:48:83.23:548,83,0	1/1:9,0:9:25.65:144,26,0	0/0:62,0:14:25.80:0,26,314	0/0:66,0:18:22.05:0,22,303	0/0:35,0:35:69.88:0,70,1205	0/0:34,0:34:95.48:0,95,1607	0/0:44,0:44:98.26:0,98,1611	0/1:42,0:40:99:144,0,986	0/0:47,0:47:86.92:0,87,1623	0/0:59,0:59:90.70:0,91,2262	0/0:20,0:20:60.07:0,60,903	0/0:55,0:54:59.42:0,59,1646	0/0:73,0:73:99:0,136,2986	0/0:67,0:66:98.14:0,98,2403	0/0:48,1:49:83.25:0,83,1747	1/1:30,1:31:88.03:483,88,0	0/0:62,1:63:78.47:0,78,2414	1/1:35,0:34:8.19:337,8,0	0/1:32,0:25:59.11:59,0,753	0/0:39,0:39:39.65:0,40,1142	0/0:166,0:163:99:0,202,4246	0/0:22,0:22:49.70:0,50,858	0/0:26,0:26:43.58:0,44,959	0/0:29,1:30:20.55:0,21,1148	0/0:31,0:31:41.75:0,42,1237	0/1:66,1:66:99:129,0,2042	0/1:31,1:31:66.16:66,0,886	0/1:15,0:15:8.39:8,0,249
chr10	101705796	.	ATG	A	3745.92	PASS	AB=0.950;AC=10;AF=0.179;AN=56;BaseQRankSum=9.674;DP=1293;FS=5.977;HRun=0;HaplotypeScore=228.9563;InbreedingCoeff=0.7370;MQ=55.28;MQ0=26;MQRankSum=-3.454;QD=22.30;ReadPosRankSum=-0.028;VQSLOD=3.3695;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,28:45:99:1427,113,0	1/1:5,4:9:21.07:266,21,0	0/0:62,0:12:23.56:0,24,290	0/0:64,1:17:7.44:0,7,180	0/0:35,0:35:73.79:0,74,1125	0/0:34,0:34:88.13:0,88,1361	0/0:43,0:43:99:0,102,1563	0/0:45,0:43:51.53:0,52,1186	0/0:47,0:47:99:0,105,1644	0/0:63,0:63:99:0,158,2534	0/0:18,0:18:48.15:0,48,766	0/0:54,0:53:99:0,110,1686	0/0:71,1:72:99:0,127,2549	0/0:64,1:64:99:0,115,2333	0/0:51,0:51:99:0,114,1758	1/1:10,21:31:93.28:1162,93,0	0/0:61,1:62:61.81:0,62,2243	1/1:23,12:34:71.57:840,72,0	0/1:33,1:27:4.97:5,0,720	0/0:37,0:37:74.50:0,74,1108	0/0:164,1:162:99:0,236,4010	0/0:22,1:23:21.99:0,22,845	0/0:26,0:26:55.45:0,55,889	0/0:31,0:31:60.13:0,60,1175	0/0:30,0:30:54.44:0,54,1190	0/0:65,0:64:56.82:0,57,1943	0/0:31,0:30:4.54:0,5,924	0/1:12,1:13:44.94:45,0,256
chr10	101705916	.	CCGTG	C	1025.56	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=8.659;DP=998;FS=1.601;HRun=0;HaplotypeScore=249.3555;InbreedingCoeff=0.3376;MQ=54.81;MQ0=7;MQRankSum=-5.547;QD=9.96;ReadPosRankSum=1.073;VQSLOD=3.0825;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:41:35.79:36,0,240	0/1:6,0:6:8.48:8,0,20	0/0:36,0:15:6.65:0,7,503	0/0:40,0:19:33.91:0,34,496	0/0:21,0:21:32.55:0,33,368	0/0:28,0:28:43.03:0,43,1455	0/0:43,0:43:99:0,113,2291	0/0:28,0:28:42.30:0,42,783	0/0:37,0:37:99:0,102,2078	0/0:49,0:49:99:0,145,2343	0/0:21,0:21:50.89:0,51,1084	0/0:53,0:53:99:0,122,1571	0/0:43,0:43:99:0,105,1430	0/0:42,0:42:99:0,116,1420	0/0:50,0:50:99:0,113,2487	0/1:28,0:28:97.06:97,0,115	0/0:37,0:37:99:0,102,2114	1/1:16,11:27:51.25:1005,51,0	0/0:22,0:21:53.78:0,54,760	0/0:20,0:20:47.17:0,47,929	0/0:115,0:115:99:0,289,4096	0/0:39,0:39:73.33:0,73,1834	0/0:33,0:34:91.49:0,91,1642	0/0:56,0:56:99:0,124,3268	0/0:24,0:24:46.31:0,46,1182	0/0:36,0:36:95.23:0,95,1476	0/0:12,0:12:30.03:0,30,561	0/0:7,0:7:21.06:0,21,417
chr10	101705917	.	C	CGT	5177.38	PASS	AB=0.811;AC=17;AF=0.304;AN=56;BaseQRankSum=0.031;DP=1011;FS=0.000;HRun=0;HaplotypeScore=217.2301;InbreedingCoeff=0.3646;MQ=54.58;MQ0=7;MQRankSum=-2.407;QD=11.51;ReadPosRankSum=-4.000;VQSLOD=3.5177;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:42:34.61:0,35,202	0/0:1,0:6:2.18:0,2,13	0/0:34,0:14:12.03:0,12,134	0/1:38,1:18:34.54:35,0,76	1/1:18,0:21:20.95:190,21,0	0/0:25,0:29:50.47:0,50,504	0/0:38,0:44:33.17:0,33,715	1/1:22,7:30:21.03:261,21,0	0/0:33,1:37:22.35:0,22,640	0/0:45,0:50:79.66:0,80,781	0/0:21,0:22:35.83:0,36,392	1/1:36,0:54:61.37:570,61,0	1/1:17,0:48:48.98:436,49,0	1/1:25,2:43:60.53:574,61,0	0/0:45,1:49:28.21:0,28,706	0/0:7,0:28:34.20:0,34,177	0/0:35,0:38:60.56:0,61,731	0/0:28,0:28:23.33:0,23,162	0/1:17,4:20:16.42:189,0,16	0/1:16,5:21:99:333,0,110	0/1:86,30:116:45.76:1666,0,46	0/0:35,0:39:65.85:0,66,710	0/0:28,1:33:3.94:0,4,405	0/0:53,1:56:67.03:0,67,1153	0/0:22,0:25:41.56:0,42,410	0/1:21,13:36:85.64:683,0,86	0/1:8,4:12:99:117,0,111	0/1:5,2:7:22.46:124,0,22
chr10	101706835	.	TGAAG	T	16857.79	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=18.335;DP=623;FS=18.770;HRun=0;HaplotypeScore=140.7738;InbreedingCoeff=0.9982;MQ=79.05;MQ0=0;MQRankSum=-10.807;QD=47.49;ReadPosRankSum=2.055;VQSLOD=4.6317;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,37:40:96.33:1809,96,0	1/1:0,7:7:18.06:348,18,0	0/0:19,0:19:47.98:0,48,1202	0/0:16,0:16:38.99:0,39,856	1/1:2,25:27:60.21:1156,60,0	0/0:20,0:20:57.20:0,57,1553	0/0:18,0:18:54.15:0,54,1363	1/1:8,25:33:75.22:1414,75,0	0/0:15,0:15:39.13:0,39,1068	0/0:24,0:24:72.23:0,72,1917	0/0:21,0:21:63.22:0,63,1695	1/1:2,26:28:63.22:1220,63,0	1/1:1,18:19:51.17:986,51,0	1/1:2,20:22:57.67:1102,58,0	0/0:28,0:28:84.27:0,84,2188	1/1:2,22:24:63.22:1217,63,0	0/0:21,0:21:63.22:0,63,1726	1/1:1,12:13:30.10:578,30,0	1/1:7,21:28:63.12:1144,63,0	1/1:1,22:23:63.22:1219,63,0	1/1:1,16:17:36.12:671,36,0	0/0:23,0:23:69.24:0,69,1856	0/0:22,0:22:66.23:0,66,1802	0/0:14,0:14:42.14:0,42,1151	0/0:27,0:27:81.26:0,81,2147	1/1:1,30:31:90.27:1672,90,0	1/1:2,33:35:99:1914,99,0	1/1:1,7:8:21.07:407,21,0
chr10	101707568	.	CA	C	2189.11	PASS	AB=0.793;AC=20;AF=0.357;AN=56;BaseQRankSum=9.505;DP=634;FS=2.115;HRun=13;HaplotypeScore=88.4172;InbreedingCoeff=0.7645;MQ=77.52;MQ0=0;MQRankSum=0.551;QD=8.23;ReadPosRankSum=4.698;VQSLOD=3.1007;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:51:70.14:214,70,0	1/1:2,0:10:12.69:36,13,0	0/1:22,0:21:32.64:33,0,66	0/0:15,0:15:1.51:0,2,52	0/0:14,1:15:17.62:0,18,325	0/0:29,1:30:38.13:0,38,518	0/0:18,1:19:23.16:0,23,387	1/1:7,17:26:28.51:346,29,0	0/0:19,2:21:11.97:0,12,256	0/0:18,0:20:22.96:0,23,355	0/0:18,1:20:0.68:0,1,287	0/0:19,3:23:20.13:0,20,345	0/0:17,0:17:33.02:0,33,303	0/0:29,1:30:50.08:0,50,602	0/0:31,0:35:68.76:0,69,630	1/1:4,1:19:26.52:91,27,0	0/0:27,2:30:40.87:0,41,517	0/0:6,0:13:17.04:0,17,96	1/1:6,19:25:29.96:342,30,0	1/1:10,20:30:18.41:299,18,0	1/1:9,18:27:20.79:320,21,0	0/0:23,0:23:27.88:0,28,407	0/0:19,0:19:33.05:0,33,318	0/0:14,2:17:4.74:0,5,190	0/0:21,0:21:60.09:0,60,580	0/1:4,11:17:5.76:187,0,6	1/1:7,15:23:36.57:266,37,0	1/1:3,13:16:35.79:263,36,0
chr10	101707832	.	TA	T	1677.40	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.527;DP=598;FS=0.000;HRun=3;HaplotypeScore=55.3804;InbreedingCoeff=0.9967;MQ=90.21;MQ0=0;MQRankSum=-3.767;QD=31.06;ReadPosRankSum=1.142;VQSLOD=3.2641;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:93.29:1150,93,0	1/1:0,6:6:18.06:223,18,0	0/0:24,0:24:69.20:0,69,938	0/0:23,0:23:63.16:0,63,866	0/0:24,0:24:63.19:0,63,872	0/0:26,0:26:75.24:0,75,1062	0/0:16,0:16:48.12:0,48,636	0/0:29,0:29:87.28:0,87,1222	0/0:20,0:20:60.17:0,60,809	0/0:25,0:25:75.24:0,75,1041	0/0:17,0:17:48.15:0,48,660	0/0:10,0:10:30.10:0,30,431	0/0:19,0:19:57.18:0,57,803	0/0:26,0:26:78.23:0,78,1072	0/0:25,0:25:75.22:0,75,1028	1/1:0,13:13:36.11:446,36,0	0/0:26,0:26:72.18:0,72,989	0/0:18,0:18:48.14:0,48,671	0/0:21,0:21:60.20:0,60,858	0/0:32,0:32:90.26:0,90,1242	0/0:19,0:19:54.18:0,54,778	0/0:16,0:16:48.12:0,48,668	0/0:18,0:18:54.18:0,54,777	0/0:16,0:16:48.15:0,48,674	0/0:18,0:18:54.17:0,54,760	0/0:30,0:30:90.29:0,90,1279	0/0:36,0:36:99:0,108,1535	0/0:10,0:10:30.10:0,30,432
chr10	101707943	.	AT	A	1743.31	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.009;DP=547;FS=4.320;HRun=2;HaplotypeScore=53.0418;InbreedingCoeff=0.9990;MQ=88.16;MQ0=0;MQRankSum=-4.818;QD=32.89;ReadPosRankSum=0.555;VQSLOD=3.4205;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:66.13:835,66,0	1/1:0,10:10:23.97:311,24,0	0/0:18,0:18:54.18:0,54,782	0/0:24,0:24:66.18:0,66,928	0/0:35,0:35:99:0,102,1488	0/0:19,0:19:57.19:0,57,853	0/0:16,0:16:48.15:0,48,698	0/0:25,0:25:75.25:0,75,1121	0/0:16,0:16:48.16:0,48,718	0/0:17,0:17:51.17:0,51,749	0/0:16,0:16:48.16:0,48,718	0/0:15,0:15:45.14:0,45,656	0/0:20,0:20:60.20:0,60,899	0/0:17,0:17:48.15:0,48,701	0/0:26,0:26:78.24:0,78,1130	1/1:0,20:20:57.19:740,57,0	0/0:17,0:17:51.17:0,51,764	0/0:19,0:19:57.19:0,57,854	0/0:19,0:19:54.17:0,54,789	0/0:27,0:27:78.24:0,78,1130	0/0:15,0:15:42.13:0,42,609	0/0:11,0:11:33.11:0,33,495	0/0:17,0:17:51.17:0,51,764	0/0:18,0:18:54.17:0,54,780	0/0:23,0:23:69.23:0,69,1034	0/0:28,0:28:81.27:0,81,1214	0/0:25,0:25:72.19:0,72,998	0/0:11,0:11:33.11:0,33,495
chr10	101708380	.	GAGACGAAACGA	G	4831.25	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.560;DP=630;FS=9.691;HRun=0;HaplotypeScore=197.2760;InbreedingCoeff=0.9997;MQ=80.79;MQ0=0;MQRankSum=-11.652;QD=79.20;ReadPosRankSum=1.698;VQSLOD=4.0921;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:30:69.23:2034,69,0	1/1:0,15:15:39.13:1294,39,0	0/0:18,0:18:45.14:0,45,2132	0/0:22,0:22:63.22:0,63,3254	0/0:11,0:11:33.10:0,33,1719	0/0:14,0:14:42.14:0,42,2288	0/0:26,0:26:78.27:0,78,4378	0/0:29,0:29:78.27:0,78,4104	0/0:30,0:30:84.29:0,84,4235	0/0:21,0:21:57.20:0,57,2913	0/0:13,0:13:36.12:0,36,1656	0/0:37,0:37:99:0,108,5746	0/0:26,0:26:69.24:0,69,3841	0/0:25,0:25:69.24:0,69,3609	0/0:27,0:27:72.25:0,72,4044	1/1:1,15:16:45.15:1504,45,0	0/0:30,0:30:84.29:0,84,4251	0/0:16,0:16:42.14:0,42,2392	0/0:20,0:20:54.19:0,54,2927	0/0:18,0:18:51.18:0,51,2748	0/0:44,0:44:99:0,123,6445	0/0:13,0:13:33.07:0,33,1458	0/0:14,0:14:39.13:0,39,1921	0/0:35,0:34:99:0,100,5217	0/0:20,0:20:57.20:0,57,2743	0/0:24,0:24:72.25:0,72,3745	0/0:23,0:23:69.22:0,69,3647	0/0:13,0:13:39.13:0,39,2008
chr10	101709041	.	C	CT	2514.43	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=13.049;DP=651;FS=0.474;HRun=4;HaplotypeScore=74.8967;InbreedingCoeff=0.9965;MQ=77.82;MQ0=0;MQRankSum=-6.390;QD=28.90;ReadPosRankSum=2.051;VQSLOD=3.6228;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,36:41:96.16:1237,96,0	1/1:2,8:10:21.07:282,21,0	0/0:10,0:10:20.98:0,21,209	0/0:20,0:20:48.07:0,48,502	0/0:21,0:21:63.16:0,63,702	0/0:22,0:22:60.15:0,60,671	0/0:29,0:29:78.21:0,78,875	0/0:30,0:30:75.19:0,75,836	0/0:20,0:20:60.17:0,60,680	0/0:22,0:22:63.18:0,63,713	0/0:22,0:22:66.17:0,66,737	0/0:22,0:22:66.18:0,66,740	0/0:29,0:29:81.21:0,81,905	0/0:17,0:17:48.12:0,48,535	0/0:34,0:34:96.26:0,96,1079	1/1:4,32:36:87.23:1138,87,0	0/0:25,0:25:69.20:0,69,783	0/0:13,0:13:36.09:0,36,398	0/0:16,0:16:39.09:0,39,426	0/0:32,0:32:90.24:0,90,1012	0/0:30,0:30:81.19:0,81,897	0/0:21,0:21:48.11:0,48,526	0/0:12,0:12:27.08:0,27,306	0/0:20,0:20:57.16:0,57,646	0/0:21,0:21:63.15:0,63,696	0/0:37,0:37:99:0,102,1150	0/0:28,0:28:78.22:0,78,884	0/0:11,0:11:30.09:0,30,340
chr10	101710822	.	AT	A	841.96	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.098;DP=514;FS=5.160;HRun=8;HaplotypeScore=50.4709;InbreedingCoeff=0.9541;MQ=71.36;MQ0=0;MQRankSum=-1.104;QD=20.54;ReadPosRankSum=-1.159;VQSLOD=2.9973;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:48.08:463,48,0	1/1:0,7:7:21.03:202,21,0	0/0:14,0:14:11.55:0,12,254	0/0:12,0:12:6.79:0,7,136	0/0:26,0:26:69.20:0,69,816	0/0:23,0:22:60.18:0,60,725	0/0:11,0:11:30.09:0,30,362	0/0:25,0:25:60.63:0,61,695	0/0:12,0:12:33.09:0,33,387	0/0:29,0:29:78.23:0,78,934	0/0:25,0:25:72.22:0,72,870	0/0:21,0:21:57.16:0,57,677	0/0:18,0:18:54.15:0,54,640	0/0:18,0:18:48.15:0,48,580	0/0:11,0:11:33.10:0,33,399	1/1:2,13:15:33.04:319,33,0	0/0:21,0:21:45.14:0,45,544	0/0:22,0:22:66.12:0,66,765	0/0:16,0:16:39.10:0,39,457	0/0:38,0:38:99:0,105,1245	0/0:8,0:8:24.07:0,24,290	0/0:18,0:18:45.14:0,45,544	0/0:14,0:14:36.11:0,36,435	0/0:10,0:10:30.09:0,30,362	0/0:18,0:18:54.17:0,54,652	0/0:19,0:19:45.14:0,45,544	0/0:28,0:28:72.19:0,72,854	0/0:16,0:16:45.14:0,45,543
chr10	101711008	.	A	AG	1275.22	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.694;DP=548;FS=9.540;HRun=0;HaplotypeScore=72.0914;InbreedingCoeff=0.9503;MQ=66.78;MQ0=8;MQRankSum=-2.235;QD=21.61;ReadPosRankSum=3.345;VQSLOD=4.7902;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:35:64.55:898,65,0	1/1:0,4:4:8.83:90,9,0	0/0:20,0:12:19.46:0,19,228	0/0:21,0:12:25.24:0,25,212	0/0:27,0:26:44.97:0,45,284	0/0:22,0:22:61.71:0,62,650	0/0:21,0:21:56.70:0,57,549	0/0:17,0:17:27.81:0,28,255	0/0:14,0:14:37.87:0,38,423	0/0:20,0:20:57.02:0,57,620	0/0:26,0:26:75.74:0,76,775	0/0:20,0:19:33.65:0,34,276	0/0:13,0:13:32.08:0,32,239	0/0:16,0:16:36.25:0,36,269	0/0:13,0:13:36.98:0,37,441	1/1:11,9:20:17.10:423,17,0	0/0:30,0:29:75.48:0,75,781	0/0:16,0:16:37.08:0,37,251	0/0:28,0:26:47.13:0,47,346	0/0:18,0:18:33.47:0,33,278	0/0:7,0:7:14.71:0,15,126	0/0:16,0:16:39.93:0,40,456	0/0:17,0:17:45.61:0,46,393	0/0:27,0:27:73.76:0,74,771	0/0:19,0:19:53.91:0,54,553	0/0:23,0:23:46.43:0,46,385	0/0:26,0:25:31.69:0,32,332	0/0:12,0:9:10.62:0,11,112
chr10	101711901	.	AT	A	3433.94	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.527;DP=614;FS=3.837;HRun=9;HaplotypeScore=64.2563;InbreedingCoeff=0.9794;MQ=74.99;MQ0=0;MQRankSum=-1.224;QD=22.30;ReadPosRankSum=-0.496;VQSLOD=4.3375;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:36:82.53:0,83,429	0/0:3,0:13:22.73:0,23,116	0/0:11,0:11:20.94:0,21,208	0/0:19,0:18:35.48:0,35,363	0/0:29,0:29:75.22:0,75,866	0/0:19,0:19:51.14:0,51,580	0/0:21,0:21:63.15:0,63,699	1/1:0,23:23:69.01:625,69,0	0/0:22,0:22:51.12:0,51,575	0/0:17,0:17:48.14:0,48,554	0/0:15,0:15:42.12:0,42,482	0/0:19,0:19:51.15:0,51,588	0/0:25,0:25:72.19:0,72,813	0/0:21,0:21:57.15:0,57,639	0/0:21,0:21:60.14:0,60,666	0/0:5,0:21:54.80:0,55,365	0/0:38,0:38:93.25:0,93,1052	0/0:15,0:15:42.12:0,42,484	1/1:6,18:24:51.01:466,51,0	1/1:5,28:33:80.94:724,81,0	1/1:2,23:25:66.03:604,66,0	0/0:25,0:25:69.19:0,69,783	0/0:22,0:22:66.20:0,66,760	0/0:31,0:31:87.20:0,87,971	0/0:20,0:20:57.17:0,57,658	1/1:1,16:17:48.02:439,48,0	1/1:2,24:26:57:522,57,0	1/1:2,4:6:6:55,6,0
chr10	101712969	.	G	GTGTGTGTGTGTGTGTGCGCGCGC	2002.26	PASS	AB=1.000;AC=10;AF=0.192;AN=52;BaseQRankSum=5.373;DP=479;FS=3.962;HRun=0;HaplotypeScore=305.3042;InbreedingCoeff=0.3466;MQ=74.86;MQ0=0;MQRankSum=-6.101;QD=20.64;ReadPosRankSum=0.100;VQSLOD=1.9440;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:36.59:0,37,1019	0/0:2,0:2:6.02:0,6,173	0/0:28,0:24:49.51:0,50,2071	0/0:32,0:29:77.54:0,78,2323	./.	0/0:24,0:24:66.21:0,66,3353	0/0:32,0:32:93.32:0,93,4493	0/1:25,0:21:99:150,0,1244	0/0:13,0:13:39.13:0,39,2258	0/0:26,0:26:78.26:0,78,4188	0/0:25,0:25:69.23:0,69,2916	1/1:0,5:6:3.01:299,3,0	1/1:3,0:13:12:402,12,0	1/1:1,7:15:6.02:573,6,0	0/0:29,0:29:78.25:0,78,4053	0/0:4,0:4:6.02:0,6,169	0/0:34,0:34:96.33:0,96,5285	0/1:12,0:12:99:327,0,465	0/1:11,0:11:99:168,0,442	0/0:8,0:8:15.05:0,15,358	0/0:12,0:12:8.88:0,9,226	0/0:14,0:14:30.10:0,30,1191	0/0:21,0:21:63.20:0,63,3150	0/0:34,0:34:99:0,102,5149	0/0:18,0:18:48.16:0,48,2702	0/1:15,0:15:99:226,0,776	0/0:4,0:4:6.02:0,6,180	./.
chr10	101713122	.	T	TA	1734.82	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-6.505;DP=558;FS=12.269;HRun=10;HaplotypeScore=62.3937;InbreedingCoeff=0.9093;MQ=74.58;MQ0=1;MQRankSum=-1.073;QD=21.69;ReadPosRankSum=0.685;VQSLOD=3.8563;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:54.09:562,54,0	1/1:0,7:7:18.05:192,18,0	0/0:22,0:21:28.03:0,28,198	0/0:20,0:19:4.33:0,4,164	0/0:27,0:27:74.89:0,75,612	0/0:32,0:32:83.89:0,84,689	0/0:16,0:16:44.94:0,45,369	0/0:22,0:22:56.60:0,57,465	0/0:15,0:15:35.94:0,36,296	0/0:25,0:25:65.88:0,66,537	0/0:18,0:18:47.89:0,48,386	0/0:12,0:12:23.93:0,24,197	0/0:22,0:23:53.42:0,53,427	0/0:18,0:18:35.91:0,36,292	0/0:21,0:21:59.91:0,60,489	1/1:4,10:14:4.14:233,4,0	0/0:35,0:35:98.86:0,99,809	0/0:12,0:12:35.96:0,36,296	0/0:16,1:17:6.95:0,7,263	0/0:13,0:13:38.95:0,39,320	0/0:10,0:12:28.95:0,29,219	0/0:16,0:16:44.93:0,45,369	1/1:1,19:20:48.08:499,48,0	1/1:1,14:15:39.10:416,39,0	0/0:35,1:36:70.11:0,70,780	0/0:20,0:20:47.90:0,48,392	0/0:7,0:7:17.98:0,18,148	0/0:37,0:38:88.89:0,89,718
chr10	101713507	.	ATTT	A	2292.75	PASS	AB=0.941;AC=9;AF=0.161;AN=56;BaseQRankSum=11.302;DP=629;FS=10.373;HRun=13;HaplotypeScore=104.9783;InbreedingCoeff=0.8924;MQ=74.22;MQ0=0;MQRankSum=-1.707;QD=21.23;ReadPosRankSum=4.057;VQSLOD=1.7911;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:30:63.19:0,63,918	0/0:1,0:9:27.09:0,27,397	0/0:19,0:17:28.88:0,29,363	0/1:13,0:15:5.69:6,0,329	1/1:4,25:29:57.03:693,57,0	0/0:25,0:30:75.19:0,75,1295	0/0:27,0:27:78.21:0,78,1354	0/0:27,0:27:57.18:0,57,1063	0/0:9,0:10:27.07:0,27,480	0/0:25,0:27:69.18:0,69,1195	0/0:27,0:27:69.23:0,69,1255	1/1:3,20:23:51.10:605,51,0	1/1:1,18:19:48.09:568,48,0	1/1:3,18:21:48.13:584,48,0	0/0:21,0:21:45.15:0,45,841	0/0:13,0:32:60.18:0,60,855	0/0:35,0:39:99:0,108,1825	0/0:1,0:21:23.67:0,24,55	0/0:19,0:19:48.15:0,48,890	0/0:23,0:25:72.18:0,72,1275	0/0:15,0:15:30.09:0,30,538	0/0:22,0:22:60.16:0,60,1103	0/0:13,0:16:42.12:0,42,688	0/0:18,0:18:51.17:0,51,953	0/0:21,0:21:54.18:0,54,1011	0/0:24,0:25:66.21:0,66,1138	0/0:20,0:20:51.17:0,51,940	0/0:19,0:20:57.17:0,57,1012
chr10	101714218	.	C	CT	576.87	PASS	AB=0.887;AC=8;AF=0.143;AN=56;BaseQRankSum=-0.740;DP=673;FS=2.034;HRun=14;HaplotypeScore=99.7817;InbreedingCoeff=0.4102;MQ=67.37;MQ0=0;MQRankSum=0.859;QD=3.98;ReadPosRankSum=-2.195;VQSLOD=1.1944;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,2:31:4.28:0,4,259	0/0:11,0:11:20.51:0,21,129	0/0:18,1:16:13.89:0,14,102	0/1:18,0:15:6.46:6,0,17	1/1:8,15:25:23.59:216,24,0	0/0:21,0:21:26.28:0,26,169	0/0:18,0:18:17.26:0,17,112	0/0:32,0:35:35.32:0,35,220	0/0:23,0:27:27.29:0,27,152	0/0:18,0:20:33.45:0,33,204	0/0:14,0:16:23.96:0,24,144	0/1:11,12:23:31.62:108,0,32	1/1:7,21:28:17.20:266,17,0	0/1:23,2:25:23.88:116,0,24	0/0:24,2:29:13.92:0,14,210	0/1:23,1:26:4.39:4,0,211	0/0:22,0:23:38.13:0,38,248	0/0:23,0:23:33.88:0,34,225	0/0:21,0:23:44.84:0,45,264	0/0:23,2:25:13.12:0,13,283	0/0:14,0:14:23.53:0,24,153	0/0:30,0:31:40.70:0,41,264	0/0:23,0:23:24.11:0,24,257	0/0:18,0:18:23.47:0,23,154	0/0:32,0:34:36.55:0,37,358	0/0:45,0:51:75.14:0,75,451	0/0:26,0:28:43.14:0,43,273	0/0:7,0:8:10.87:0,11,64
chr10	101714754	.	C	CT	4147.34	PASS	AB=0.933;AC=31;AF=0.554;AN=56;BaseQRankSum=7.103;DP=362;FS=34.854;HRun=10;HaplotypeScore=58.8536;InbreedingCoeff=0.8428;MQ=79.83;MQ0=0;MQRankSum=-2.996;QD=22.79;ReadPosRankSum=-0.949;VQSLOD=1.8456;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,11:13:27.07:288,27,0	1/1:0,6:6:18.05:192,18,0	0/0:19,0:18:16.71:0,17,99	0/1:13,1:12:13.62:14,0,77	1/1:0,11:11:30.08:320,30,0	0/0:22,0:22:34.91:0,35,443	0/0:6,0:6:17.98:0,18,147	1/1:5,26:31:56.52:789,57,0	0/0:7,0:7:17.98:0,18,148	0/0:19,0:19:47.91:0,48,394	0/0:20,0:20:50.93:0,51,418	1/1:1,6:7:11.82:128,12,0	1/1:1,3:4:9.02:96,9,0	1/1:1,6:7:12.03:128,12,0	0/0:10,1:11:0.98:0,1,214	1/1:1,9:10:18.05:192,18,0	0/0:33,0:33:86.87:0,87,714	1/1:5,12:17:39.10:414,39,0	1/1:3,11:15:35.88:354,36,0	1/1:0,6:6:18.05:192,18,0	1/1:2,1:3:5.97:52,6,0	0/0:4,0:4:5.98:0,6,47	0/0:10,0:10:29.95:0,30,243	0/0:9,0:9:23.97:0,24,197	0/0:18,1:19:24.94:0,25,408	1/1:2,13:15:17.45:384,17,0	1/1:2,12:14:36.09:383,36,0	1/1:2,7:9:21.05:224,21,0
chr10	101714783	.	T	TTTTATTTATTTA	4593.60	PASS	AC=24;AF=0.462;AN=52;BaseQRankSum=5.197;DP=337;FS=0.000;HRun=0;HaplotypeScore=136.4447;InbreedingCoeff=0.7255;MQ=72.22;MQ0=0;MQRankSum=-5.006;QD=33.78;ReadPosRankSum=-4.771;VQSLOD=2.4609;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:3.01:44,3,0	1/1:6,0:7:6.02:230,6,0	0/0:15,0:12:9.03:0,9,256	0/0:15,0:12:3.48:0,3,38	./.	0/0:21,0:21:39.13:0,39,1256	0/0:5,0:5:9.03:0,9,258	1/1:27,0:26:21.04:416,21,0	0/0:7,0:7:18.05:0,18,484	0/0:17,0:17:33.11:0,33,1065	0/0:17,0:17:24.08:0,24,672	1/1:3,0:3:3:25,3,0	1/1:6,0:6:9.01:285,9,0	1/1:5,0:5:3.01:137,3,0	0/0:9,0:9:15.05:0,15,508	1/1:9,0:9:3.01:128,3,0	0/0:33,0:33:72.25:0,72,2401	1/1:18,0:19:24.06:882,24,0	1/1:21,3:23:33.05:1248,33,0	./.	1/1:2,1:4:3.01:176,3,0	0/0:3,0:3:3.01:0,3,104	0/0:7,0:7:6.02:0,6,208	0/0:9,0:9:12.04:0,12,362	0/0:20,0:20:33.08:0,33,892	0/0:10,0:10:3.01:0,3,104	1/1:11,1:12:21.01:638,21,0	1/1:10,0:11:15.48:386,15,0
chr10	101714989	.	C	CA	2756.29	PASS	AB=0.966;AC=31;AF=0.554;AN=56;BaseQRankSum=2.840;DP=452;FS=11.218;HRun=13;HaplotypeScore=65.1517;InbreedingCoeff=0.8734;MQ=78.04;MQ0=5;MQRankSum=0.728;QD=11.03;ReadPosRankSum=-1.981;VQSLOD=1.5887;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:24:41.84:375,42,0	1/1:0,4:4:9.01:84,9,0	0/0:34,0:18:15.64:0,16,90	0/1:27,1:21:11.19:38,0,11	1/1:2,4:6:11.97:103,12,0	0/0:16,0:16:44.62:0,45,308	0/0:17,0:17:41.55:0,42,282	1/1:8,0:28:54.04:274,54,0	0/0:15,0:15:32.59:0,33,222	0/0:17,0:17:44.59:0,45,305	0/0:9,0:9:15.72:0,16,103	1/1:3,14:18:12.30:245,12,0	1/1:2,13:14:29.81:274,30,0	1/1:6,14:21:13.92:259,14,0	0/0:18,1:19:13.73:0,14,238	1/1:2,9:11:21.02:195,21,0	0/0:29,1:30:36.22:0,36,389	1/1:5,1:18:46.18:279,46,0	1/1:6,2:20:43.27:255,43,0	1/1:0,0:6:14.56:87,15,0	1/1:1,2:11:23.52:142,24,0	0/0:5,0:5:8.87:0,9,62	0/0:6,0:8:21.93:0,22,135	0/0:15,0:16:10.74:0,11,170	0/0:15,1:16:10.04:0,10,203	1/1:2,1:11:25.90:148,26,0	1/1:6,0:22:31.45:176,31,0	1/1:2,0:4:8.52:43,9,0
chr10	101715126	.	GC	G	1423.14	PASS	AB=0.896;AC=11;AF=0.196;AN=56;BaseQRankSum=-2.462;DP=496;FS=0.481;HRun=10;HaplotypeScore=71.3229;InbreedingCoeff=0.5801;MQ=83.80;MQ0=0;MQRankSum=-0.390;QD=10.70;ReadPosRankSum=3.218;VQSLOD=2.9435;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:38:45.33:0,45,229	0/0:2,0:8:14.33:0,14,77	0/0:19,0:19:2.37:0,2,142	0/0:21,0:20:7.40:0,7,127	1/1:6,12:18:29.97:260,30,0	0/0:18,1:19:10.03:0,10,323	0/0:21,1:22:25.05:0,25,481	0/0:25,0:25:51.34:0,51,257	0/0:16,0:16:40.26:0,40,389	0/1:12,1:13:11.03:11,0,109	0/1:11,2:13:31.07:31,0,137	1/1:1,14:15:38.98:338,39,0	1/1:6,17:23:44.97:390,45,0	1/1:3,23:26:62.98:546,63,0	0/0:10,1:11:3.98:0,4,241	0/0:5,0:11:26.81:0,27,131	0/0:23,0:23:57.10:0,57,597	0/0:8,0:21:34.35:0,34,197	0/0:10,0:10:20.06:0,20,104	0/0:13,0:13:32.27:0,32,192	0/0:24,0:24:61.70:0,62,376	0/0:7,0:7:12.02:0,12,126	0/0:11,0:11:21.06:0,21,232	0/1:21,3:25:15.11:15,0,495	0/0:16,0:16:14.77:0,15,152	0/0:16,0:16:45.89:0,46,251	0/0:20,0:20:50.08:0,50,319	0/0:12,0:12:35.47:0,35,230
chr10	101716923	.	A	AT	4883.63	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-12.948;DP=626;FS=3.077;HRun=8;HaplotypeScore=57.6097;InbreedingCoeff=0.9960;MQ=73.84;MQ0=0;MQRankSum=-0.588;QD=26.83;ReadPosRankSum=1.375;VQSLOD=5.6871;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,40:43:71.83:1078,72,0	1/1:0,12:12:27.08:312,27,0	0/0:8,0:8:20.99:0,21,185	0/0:12,0:12:14.95:0,15,130	1/1:4,28:32:75.22:866,75,0	0/0:20,0:20:48.02:0,48,439	0/0:16,0:16:48.01:0,48,435	0/0:23,0:23:53.97:0,54,481	0/0:44,0:44:98.30:0,98,1043	0/0:37,0:37:87.01:0,87,787	0/0:21,0:21:57.01:0,57,516	1/1:0,17:17:48.14:554,48,0	1/1:0,17:17:45.13:519,45,0	1/1:3,18:21:45.13:519,45,0	0/0:25,0:25:69.03:0,69,631	1/1:4,15:19:39.11:447,39,0	0/0:29,0:28:81.03:0,81,736	1/1:1,20:21:51.15:589,51,0	0/0:23,0:23:54.02:0,54,494	0/0:20,0:20:51.02:0,51,467	0/0:8,0:8:24.01:0,24,220	0/0:30,0:30:78.03:0,78,710	0/0:21,0:21:54.02:0,54,494	0/0:13,0:13:36.02:0,36,330	0/0:20,0:20:54.03:0,54,494	0/0:31,0:31:75.02:0,75,683	0/0:28,0:28:77.99:0,78,698	0/0:15,0:15:36.02:0,36,330
chr10	101718291	.	G	GAC	9696.60	PASS	AB=0.604;AC=18;AF=0.321;AN=56;BaseQRankSum=-6.244;DP=861;FS=2.137;HRun=0;HaplotypeScore=131.6474;InbreedingCoeff=0.8652;MQ=67.68;MQ0=4;MQRankSum=-6.472;QD=34.63;ReadPosRankSum=0.757;VQSLOD=6.9890;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,32:44:65.86:1215,66,0	1/1:0,12:12:27.09:459,27,0	0/0:41,0:25:50.09:0,50,657	0/0:44,0:35:48.04:0,48,585	0/0:35,0:35:84.27:0,84,1091	0/0:24,0:24:57.18:0,57,741	0/0:38,0:38:96.28:0,96,1211	1/1:12,24:36:58.78:1123,59,0	0/0:36,0:36:93.27:0,93,1178	0/0:35,0:35:96.25:0,96,1192	0/0:30,0:30:81.26:0,81,1053	0/0:32,0:32:87.25:0,87,1102	0/0:29,0:29:81.26:0,81,1047	0/0:29,0:29:72.20:0,72,907	0/0:33,0:33:75.19:0,75,929	1/1:3,29:32:81.17:1377,81,0	0/0:27,0:26:69.51:0,70,931	0/0:15,0:15:35.85:0,36,436	1/1:7,11:16:39.12:637,39,0	1/1:9,18:27:57.16:902,57,0	1/1:11,23:34:54.18:916,54,0	0/0:33,0:33:87.18:0,87,1096	0/0:30,0:30:72.21:0,72,998	0/0:44,0:44:99:0,105,1349	0/0:23,0:23:63.14:0,63,799	0/1:12,16:28:59.80:899,0,60	1/1:5,31:36:99:1670,99,0	0/1:3,9:12:2.87:499,0,3
chr10	101718316	.	CCA	C	2473.61	PASS	AB=0.841;AC=17;AF=0.304;AN=56;BaseQRankSum=10.939;DP=888;FS=2.880;HRun=0;HaplotypeScore=148.2043;InbreedingCoeff=0.0534;MQ=55.82;MQ0=18;MQRankSum=-5.610;QD=5.85;ReadPosRankSum=-1.522;VQSLOD=2.9562;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,1:39:6.25:6,0,457	0/1:8,1:9:22.28:22,0,123	0/0:44,0:11:3.01:0,3,36	0/0:59,0:22:8.06:0,8,131	0/1:35,2:37:33.67:34,0,806	0/0:31,3:34:0.60:0,1,871	0/1:26,7:33:99:105,0,708	0/1:30,8:37:3.52:400,0,4	0/1:30,2:32:14.46:14,0,687	0/0:31,2:33:12.51:0,13,990	0/0:29,1:30:31.90:0,32,913	0/1:39,4:43:47.21:47,0,1102	0/0:33,1:34:34.90:0,35,953	0/0:31,1:32:34.91:0,35,970	0/0:9,1:36:13.57:0,14,379	0/0:27,1:28:30.21:0,30,626	0/0:31,0:30:34.44:0,34,982	0/0:8,0:18:26.83:0,27,239	1/1:9,6:13:13.61:251,14,0	0/1:11,11:24:54.17:285,0,54	1/1:25,5:31:17.77:196,18,0	0/0:31,1:32:16.49:0,16,680	0/0:26,2:28:25.88:0,26,841	0/1:32,4:36:86.12:86,0,549	0/0:25,0:25:16.93:0,17,707	0/1:14,9:23:56.39:276,0,56	0/1:18,18:39:26.74:580,0,27	1/1:7,13:20:32.57:342,33,0
chr10	101719179	.	T	TGGG	2925.51	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.784;DP=742;FS=1.075;HRun=2;HaplotypeScore=109.1995;InbreedingCoeff=0.9983;MQ=85.05;MQ0=0;MQRankSum=-2.284;QD=39.01;ReadPosRankSum=-0.122;VQSLOD=2.5066;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1721	0/0:9,0:9:27.07:0,27,438	0/0:30,0:30:77.42:0,77,1271	0/0:18,0:18:39.73:0,40,728	1/1:2,13:19:35.94:595,36,0	0/0:25,0:25:75.24:0,75,1288	0/0:30,0:30:90.21:0,90,1488	0/0:34,0:34:99:0,102,1683	0/0:28,0:28:78.27:0,78,1374	0/0:40,0:40:99:0,120,1979	0/0:26,0:26:75.20:0,75,1206	1/1:5,12:18:45.10:886,45,0	1/1:1,12:14:30.10:638,30,0	1/1:3,20:24:48.16:967,48,0	0/0:33,0:33:96.28:0,96,1600	0/0:33,0:33:96.30:0,96,1631	0/0:38,0:38:99:0,114,1876	0/0:21,0:21:63.15:0,63,1042	0/0:28,0:28:81.25:0,81,1335	0/0:24,0:24:72.25:0,72,1262	0/0:37,0:37:99:0,105,1743	0/0:28,0:28:81.26:0,81,1395	0/0:11,0:11:33.07:0,33,543	0/0:41,0:41:99:0,123,2002	0/0:27,0:27:75.23:0,75,1248	0/0:37,0:37:99:0,108,1856	0/0:26,0:26:75.24:0,75,1289	0/0:7,0:7:20.99:0,21,278
chr10	101721103	.	GAGA	G	4560.80	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.425;DP=655;FS=6.520;HRun=0;HaplotypeScore=95.7216;InbreedingCoeff=0.9980;MQ=92.00;MQ0=1;MQRankSum=-2.681;QD=38.01;ReadPosRankSum=2.203;VQSLOD=5.3605;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:63.16:0,63,1171	0/0:11,0:11:30.09:0,30,628	0/0:34,0:35:86.57:0,87,1556	0/0:22,0:22:59.93:0,60,1008	1/1:0,33:33:84.03:1275,84,0	0/0:33,0:33:99:0,99,2072	0/0:20,0:20:57.20:0,57,1256	0/0:32,0:31:87.28:0,87,1811	0/0:22,0:22:66.20:0,66,1390	0/0:25,0:25:69.21:0,69,1475	0/0:26,0:26:75.24:0,75,1610	1/1:0,24:24:63.22:1029,63,0	1/1:1,19:20:45.15:734,45,0	1/1:0,23:23:57.13:900,57,0	0/0:25,0:25:63.22:0,63,1407	0/0:29,0:29:78.25:0,78,1699	0/0:21,0:21:63.20:0,63,1364	1/1:4,16:20:42.01:623,42,0	0/0:24,0:24:66.22:0,66,1403	0/0:34,0:34:99:0,102,2218	0/0:18,0:18:51.17:0,51,1117	0/0:18,0:18:54.17:0,54,1145	0/0:21,0:21:63.19:0,63,1359	0/0:16,0:16:45.14:0,45,962	0/0:24,0:24:69.20:0,69,1409	0/0:25,0:25:75.23:0,75,1554	0/0:25,0:24:75.24:0,75,1608	0/0:6,0:6:18.06:0,18,353
chr10	101722083	.	G	GAA	1115.57	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-0.953;DP=396;FS=15.297;HRun=10;HaplotypeScore=52.1794;InbreedingCoeff=0.8905;MQ=78.29;MQ0=0;MQRankSum=0.567;QD=27.89;ReadPosRankSum=-0.410;VQSLOD=1.8090;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:39.06:0,39,396	0/0:5,0:5:12.02:0,12,122	0/0:15,0:15:19.42:0,19,187	0/0:10,0:11:11.72:0,12,103	1/1:2,10:12:2.55:392,3,0	0/0:15,0:15:42.10:0,42,427	0/0:13,0:14:38.82:0,39,378	0/0:28,0:28:57.06:0,57,575	0/0:10,0:10:27.06:0,27,275	0/0:9,0:9:24.04:0,24,239	0/0:10,0:11:14.86:0,15,231	1/1:2,6:8:21.07:306,21,0	1/1:2,6:9:21.06:298,21,0	1/1:1,10:11:18.06:268,18,0	0/0:10,0:10:30.02:0,30,285	0/0:12,0:12:36.08:0,36,366	0/0:19,0:19:51.08:0,51,519	0/0:18,0:18:54.05:0,54,530	0/0:14,0:14:32.95:0,33,316	0/0:22,0:22:51.04:0,51,512	0/0:11,0:11:24.01:0,24,244	0/0:6,0:7:11.95:0,12,175	0/0:12,0:12:30.03:0,30,298	0/0:14,0:14:27.03:0,27,275	0/0:16,0:17:44.83:0,45,439	0/0:25,0:26:65.86:0,66,642	0/0:26,0:27:68.62:0,69,663	0/0:9,0:10:8.65:0,9,73
chr10	101722255	.	TATATATATATATATATATATATATATATATATATATAC	T	2991.99	PASS	AC=12;AF=0.375;AN=32;BaseQRankSum=4.422;DP=182;FS=12.094;HRun=0;HaplotypeScore=177.1228;InbreedingCoeff=0.6048;MQ=53.43;MQ0=1;MQRankSum=-0.723;QD=27.20;ReadPosRankSum=0.925;VQSLOD=1.3868;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:6.02:0,6,90	./.	./.	0/0:6,0:2:2.80:0,3,13	0/0:4,0:4:0.89:0,1,2	./.	./.	1/1:20,0:20:12.02:166,12,0	./.	0/0:2,0:2:3.01:0,3,342	./.	0/0:2,0:2:3.01:0,3,359	./.	0/0:4,0:4:9.01:0,9,710	./.	./.	0/0:23,0:22:63.22:0,63,8242	0/0:6,0:6:15.03:0,15,1338	1/1:6,0:6:3:27,3,0	1/1:5,18:23:9.03:876,9,0	0/0:11,0:11:0.47:0,0,1	./.	./.	./.	0/0:3,0:3:3.01:0,3,60	1/1:5,15:20:29.81:752,30,0	1/1:17,16:33:9.03:805,9,0	1/1:2,6:8:6.02:490,6,0
chr10	101722298	.	ATG	A	606.78	PASS	AB=0.838;AC=10;AF=0.179;AN=56;BaseQRankSum=1.706;DP=303;FS=13.772;HRun=0;HaplotypeScore=82.2903;InbreedingCoeff=0.5528;MQ=55.73;MQ0=5;MQRankSum=0.938;QD=10.65;ReadPosRankSum=3.039;VQSLOD=2.0195;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:15.01:0,15,149	0/0:4,0:4:5.72:0,6,50	0/0:11,0:2:3.01:0,3,42	0/0:20,0:3:1.55:0,2,4	1/1:1,8:10:9.02:113,9,0	0/0:6,0:6:15.04:0,15,224	0/0:7,0:7:17.97:0,18,217	0/0:24,0:24:71.61:0,72,573	0/0:5,0:5:15.02:0,15,193	0/0:11,0:11:33.10:0,33,488	0/0:4,0:4:9.03:0,9,146	1/1:1,11:12:21.07:265,21,0	1/1:0,6:6:6.02:76,6,0	1/1:0,18:18:21.07:265,21,0	0/0:8,0:8:24.05:0,24,348	0/0:2,0:2:6.02:0,6,100	0/0:27,0:26:12.81:0,13,728	0/0:5,0:11:17.99:0,18,209	0/0:8,0:8:20.75:0,21,148	0/0:19,0:19:6.75:0,7,54	0/0:15,0:15:11.96:0,12,114	0/1:6,1:7:16.72:17,0,275	0/0:6,0:6:18.06:0,18,299	0/0:5,0:5:15:0,15,171	0/1:3,1:4:25.75:26,0,134	0/0:18,0:18:35.95:0,36,267	0/0:23,0:23:15.10:0,15,124	0/0:6,0:6:1.82:0,2,5
chr10	101723004	.	TA	T	3099.19	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.889;DP=610;FS=1.713;HRun=8;HaplotypeScore=86.8360;InbreedingCoeff=0.9599;MQ=83.79;MQ0=0;MQRankSum=-1.210;QD=24.79;ReadPosRankSum=3.420;VQSLOD=4.2824;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.13:0,45,532	0/0:16,0:16:48.13:0,48,562	0/0:23,0:24:54.37:0,54,584	0/0:13,0:13:24.02:0,24,260	1/1:0,31:31:81.12:782,81,0	0/0:21,0:21:63.19:0,63,761	0/0:23,0:23:66.20:0,66,797	0/0:37,0:37:90.23:0,90,1028	0/0:17,0:17:51.16:0,51,616	0/0:38,0:38:99:0,111,1332	0/0:24,0:24:69.19:0,69,819	1/1:0,17:17:48.08:464,48,0	1/1:2,24:26:69.11:666,69,0	1/1:2,23:25:63.10:608,63,0	0/0:32,0:31:93.29:0,93,1124	0/0:20,0:20:57.14:0,57,656	0/0:19,0:19:54.17:0,54,652	1/1:0,26:26:78.13:753,78,0	0/0:20,0:20:57.16:0,57,666	0/0:34,0:34:93.25:0,93,1087	0/0:12,0:12:36.04:0,36,416	0/0:12,0:13:38.96:0,39,435	0/0:19,0:19:54.15:0,54,641	0/0:18,0:18:48.15:0,48,580	0/0:22,0:22:66.19:0,66,786	0/0:17,0:17:51.16:0,51,614	0/0:28,0:26:66.19:0,66,780	0/0:1,0:1:3.01:0,3,36
chr10	101725837	.	T	TG	995.31	PASS	AB=0.808;AC=20;AF=0.357;AN=56;BaseQRankSum=5.470;DP=497;FS=0.508;HRun=9;HaplotypeScore=77.2597;InbreedingCoeff=0.8065;MQ=74.12;MQ0=0;MQRankSum=-3.118;QD=7.06;ReadPosRankSum=-5.162;VQSLOD=0.4109;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:14:23.03:129,23,0	1/1:1,10:11:21.06:232,21,0	0/0:20,0:19:21.64:0,22,225	0/1:13,0:9:18.69:19,0,108	1/1:12,0:18:10.78:57,11,0	0/0:25,1:26:37.67:0,38,542	0/0:9,0:9:20.99:0,21,182	0/0:26,0:26:47.22:0,47,413	0/0:20,0:20:53.96:0,54,465	0/0:23,0:24:53.01:0,53,448	0/0:27,0:27:59.97:0,60,520	1/1:15,0:16:17.44:102,17,0	1/1:12,0:14:17.49:109,17,0	1/1:7,0:7:8.61:46,9,0	0/0:37,0:37:99:0,108,938	1/1:1,12:13:24.06:265,24,0	0/0:27,0:27:65.90:0,66,560	1/1:4,0:10:14.24:72,14,0	0/0:16,1:17:12.11:0,12,311	0/0:23,0:23:56.96:0,57,493	0/0:7,0:7:20.98:0,21,179	0/0:15,0:15:35.97:0,36,312	0/0:23,0:23:59.99:0,60,520	0/0:11,0:11:29.99:0,30,260	0/0:28,1:29:41.80:0,42,592	0/1:6,2:16:22.73:117,0,23	0/0:14,0:14:38.99:0,39,338	1/1:9,0:9:8.68:55,9,0
chr10	101726532	.	AAGG	A	280.45	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.981;DP=360;FS=4.701;HRun=0;HaplotypeScore=51.4574;InbreedingCoeff=0.8179;MQ=71.19;MQ0=1;MQRankSum=-0.191;QD=15.58;ReadPosRankSum=0.122;VQSLOD=2.8681;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:33.11:0,33,652	0/0:6,0:6:12.04:0,12,245	0/0:15,0:8:12.03:0,12,211	0/0:18,0:12:9.89:0,10,139	0/0:19,0:19:45.01:0,45,764	0/0:14,0:14:30.10:0,30,577	0/0:8,0:8:20.47:0,20,293	0/0:16,0:16:16.27:0,16,201	0/0:16,0:16:36.12:0,36,712	0/0:11,0:11:21.04:0,21,342	0/0:16,0:16:42.14:0,42,837	0/0:10,0:10:24.07:0,24,452	0/0:7,0:7:21.07:0,21,416	0/0:9,0:9:27.08:0,27,489	0/0:8,0:8:18.05:0,18,331	0/0:15,0:15:39.13:0,39,779	0/0:17,0:17:36.12:0,36,734	0/0:12,0:12:30.09:0,30,572	0/0:7,0:7:14.41:0,14,253	0/0:13,0:13:33.10:0,33,616	0/0:10,0:10:21.07:0,21,427	0/0:10,0:10:21.07:0,21,428	0/0:19,0:19:38.89:0,39,692	0/0:12,0:12:24.08:0,24,472	0/0:16,0:16:27.09:0,27,551	1/1:7,8:15:24.08:345,24,0	0/0:21,0:21:39.13:0,39,750	1/1:2,1:3:3.01:43,3,0
chr10	101727190	.	A	ATCTCTC	953.55	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=2.779;DP=530;FS=13.564;HRun=0;HaplotypeScore=132.3078;InbreedingCoeff=0.7369;MQ=69.49;MQ0=18;MQRankSum=-3.316;QD=6.58;ReadPosRankSum=-3.470;VQSLOD=0.2830;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,5:25:3.01:52,3,0	1/1:3,2:6:5.97:146,6,0	0/0:32,0:23:6.02:0,6,117	0/0:36,0:17:8.81:0,9,144	1/1:22,0:19:5.61:74,6,0	0/0:16,0:14:27.07:0,27,496	0/0:17,0:17:27.07:0,27,482	0/0:22,0:22:19.32:0,19,381	0/0:17,0:16:18.06:0,18,358	0/0:24,0:23:39.12:0,39,722	0/0:14,0:14:18.06:0,18,359	1/1:13,1:13:12.03:230,12,0	1/1:19,0:19:9.50:213,10,0	1/1:13,0:12:6.01:104,6,0	0/0:29,0:29:60.19:0,60,1151	1/1:12,0:17:5.21:148,5,0	0/0:27,0:32:37.24:0,37,323	1/1:10,0:11:6.02:157,6,0	0/0:10,0:9:12.01:0,12,206	0/1:15,0:15:5.92:6,0,285	0/0:22,0:21:27.09:0,27,553	0/0:7,0:7:9.03:0,9,175	0/0:10,0:9:12.03:0,12,211	0/0:21,0:25:27.03:0,27,436	0/0:15,0:15:33.11:0,33,635	0/0:17,0:17:25.97:0,26,343	0/0:27,0:27:36.12:0,36,706	0/0:13,0:13:12.04:0,12,168
chr10	101727208	.	CTCTCTCTCTCTCTGTGTG	C	2261.92	PASS	AB=0.588;AC=3;AF=0.054;AN=56;BaseQRankSum=8.013;DP=564;FS=3.702;HRun=0;HaplotypeScore=233.2197;InbreedingCoeff=0.5461;MQ=55.45;MQ0=23;MQRankSum=-2.436;QD=64.63;ReadPosRankSum=-0.202;VQSLOD=3.0458;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:12.04:0,12,585	0/0:6,0:6:9.02:0,9,364	0/0:23,0:13:27.08:0,27,728	0/0:28,0:8:18.95:0,19,486	0/0:25,0:22:37.20:0,37,1118	0/0:21,0:19:45.15:0,45,3088	0/0:21,0:21:57.20:0,57,3460	0/0:21,0:19:57.20:0,57,2517	0/0:17,0:16:42.14:0,42,2388	0/0:33,0:31:90.28:0,90,5365	0/0:20,0:20:42.14:0,42,2320	0/0:15,0:13:11.21:0,11,673	0/0:16,0:16:18.85:0,19,676	0/0:11,0:11:6.25:0,6,334	0/0:35,0:35:99:0,99,5428	0/0:16,0:15:18.34:0,18,988	0/0:30,0:30:81.28:0,81,4901	0/0:12,0:11:29.98:0,30,918	0/0:15,0:13:39.07:0,39,1870	0/0:20,0:20:51.16:0,51,3005	0/0:24,0:23:54.19:0,54,3146	0/0:8,0:8:18.05:0,18,1002	0/0:19,0:18:45.14:0,45,2438	0/0:22,0:22:54.12:0,54,3168	0/0:21,0:21:54.19:0,54,3714	1/1:4,21:25:58.35:1829,58,0	0/0:29,0:29:66.70:0,67,3743	0/1:3,1:10:24.16:539,0,24
chr10	101727220	.	CTG	C	762.40	PASS	AB=0.944;AC=21;AF=0.375;AN=56;BaseQRankSum=8.036;DP=546;FS=8.251;HRun=0;HaplotypeScore=95.6212;InbreedingCoeff=0.1863;MQ=52.96;MQ0=21;MQRankSum=-1.511;QD=2.84;ReadPosRankSum=-0.085;VQSLOD=0.9642;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:11.98:0,12,102	0/0:5,0:5:6:0,6,60	0/0:15,0:6:8.88:0,9,58	0/0:24,0:6:2.97:0,3,20	1/1:17,0:17:14.80:99,15,0	0/0:20,0:18:5.10:0,5,243	0/1:23,0:23:39.33:39,0,247	0/0:26,0:24:28.12:0,28,220	0/0:15,0:14:17.98:0,18,183	0/0:32,0:30:26.71:0,27,453	0/0:26,0:26:13.49:0,13,324	0/1:13,0:13:13.68:23,0,14	1/1:15,0:15:23.29:141,23,0	1/1:9,0:8:2.92:17,3,0	0/1:33,1:34:9.45:9,0,428	0/1:14,0:13:34.54:35,0,44	0/0:32,0:31:2.68:0,3,407	1/1:12,0:12:13.13:143,13,0	0/1:14,0:12:29.84:30,0,105	0/1:19,0:19:29.40:29,0,345	0/1:24,0:23:27.45:27,0,279	0/1:8,2:10:13.34:13,0,140	0/0:19,0:18:28.74:0,29,238	0/0:22,0:22:16.08:0,16,388	0/0:22,0:22:6.29:0,6,309	1/1:22,0:23:46.13:248,46,0	0/1:20,6:26:32.96:33,0,255	1/1:9,0:10:11.32:55,11,0
chr10	101729300	.	T	TA	4107.51	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.568;DP=623;FS=0.364;HRun=9;HaplotypeScore=58.1215;InbreedingCoeff=0.9629;MQ=69.53;MQ0=1;MQRankSum=0.056;QD=27.38;ReadPosRankSum=0.774;VQSLOD=3.7231;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:66.18:730,66,0	0/0:14,1:15:5.81:0,6,274	0/0:12,0:13:14.38:0,14,215	0/0:5,0:5:11.54:0,12,81	1/1:6,33:39:99:1062,99,0	0/0:16,0:16:41.96:0,42,357	0/0:15,0:15:35.96:0,36,307	0/0:37,0:37:99:0,108,923	0/0:18,0:18:41.96:0,42,361	0/0:30,0:30:74.94:0,75,643	0/0:19,0:19:56.99:0,57,495	1/1:4,26:30:78.21:863,78,0	1/1:1,25:26:69.10:747,69,0	1/1:3,25:28:44.05:706,44,0	0/0:30,0:29:80.94:0,81,696	0/0:27,0:27:80.96:0,81,696	0/0:21,0:20:47.98:0,48,416	0/0:10,0:10:26.99:0,27,234	0/0:21,0:21:50.96:0,51,437	0/0:28,0:28:77.97:0,78,673	0/0:12,0:12:35.98:0,36,308	0/0:21,0:21:62.99:0,63,547	0/0:17,0:17:41.95:0,42,359	0/0:19,0:19:50.35:0,50,425	0/0:31,0:32:88.98:0,89,753	0/0:23,0:23:59.96:0,60,515	0/0:34,0:34:83.94:0,84,723	0/0:10,0:10:29.97:0,30,255
chr10	101730170	.	CT	C	4358.38	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.596;DP=624;FS=1.107;HRun=9;HaplotypeScore=59.1078;InbreedingCoeff=0.9963;MQ=75.04;MQ0=0;MQRankSum=-3.001;QD=23.18;ReadPosRankSum=2.585;VQSLOD=5.7398;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:35:90.04:824,90,0	0/0:11,0:11:27.08:0,27,312	0/0:10,0:11:29.80:0,30,286	0/0:13,0:12:16.29:0,16,244	1/1:3,28:31:74.30:685,74,0	0/0:33,0:33:90.27:0,90,1039	0/0:16,0:16:45.13:0,45,519	0/0:24,0:23:54.13:0,54,598	0/0:21,0:21:57.17:0,57,657	0/0:22,0:22:63.17:0,63,713	0/0:21,0:21:57.17:0,57,658	1/1:1,18:19:47.92:439,48,0	1/1:3,28:31:81.03:741,81,0	1/1:1,17:18:42.02:384,42,0	0/0:30,0:30:87.26:0,87,1004	0/0:26,0:26:63.18:0,63,718	0/0:25,0:25:66.18:0,66,752	1/1:1,20:21:54.03:494,54,0	0/0:15,0:15:42.12:0,42,484	0/0:25,0:25:63.19:0,63,727	0/0:22,0:22:60.18:0,60,692	0/0:18,0:19:53.98:0,54,595	0/0:19,0:19:39.11:0,39,447	0/0:25,0:25:69.19:0,69,786	0/0:35,0:35:99:0,99,1143	1/1:3,23:26:69.02:626,69,0	0/0:23,0:23:66.20:0,66,762	1/1:1,6:7:18.01:165,18,0
chr10	101733464	.	GA	G	793.13	PASS	AB=0.944;AC=8;AF=0.143;AN=56;BaseQRankSum=8.257;DP=459;FS=3.512;HRun=10;HaplotypeScore=44.9647;InbreedingCoeff=0.5685;MQ=71.11;MQ0=0;MQRankSum=-0.695;QD=13.67;ReadPosRankSum=-0.481;VQSLOD=3.0961;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:36:96.24:0,96,1046	0/0:5,0:5:15.04:0,15,166	0/1:10,0:9:14.02:14,0,60	0/1:7,1:7:23.22:23,0,43	0/0:14,0:14:30.06:0,30,316	0/0:23,2:26:19.95:0,20,659	0/0:8,0:9:26.91:0,27,280	0/0:18,2:21:2.03:0,2,472	0/0:12,1:13:13.08:0,13,372	0/0:9,0:9:24.06:0,24,265	0/0:11,0:11:25.88:0,26,270	0/0:14,0:17:41.75:0,42,404	0/0:26,0:26:75.19:0,75,822	0/0:17,1:18:19.08:0,19,430	0/0:33,0:33:93.23:0,93,1015	0/0:18,0:18:51.14:0,51,564	0/0:23,0:24:62.92:0,63,662	1/1:1,23:24:62.94:540,63,0	0/0:20,1:22:27.91:0,28,510	0/0:11,0:11:27.07:0,27,299	0/0:10,1:11:4.03:0,4,273	0/0:9,0:9:24.05:0,24,256	0/0:7,0:7:15.04:0,15,166	0/0:20,0:20:54.15:0,54,597	0/0:15,1:16:22.08:0,22,472	1/1:2,11:13:5.81:279,6,0	0/0:25,0:25:72.15:0,72,770	1/1:0,3:3:9:78,9,0
chr10	101733719	.	TTAA	T	289.79	PASS	AB=0.818;AC=9;AF=0.196;AN=46;BaseQRankSum=2.997;DP=252;FS=0.000;HRun=0;HaplotypeScore=37.9906;InbreedingCoeff=0.4544;MQ=84.13;MQ0=0;MQRankSum=0.074;QD=5.68;ReadPosRankSum=2.103;VQSLOD=0.9283;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,4:9:6.02:79,6,0	0/0:3,0:5:9.03:0,9,115	./.	./.	0/0:2,0:3:3.01:0,3,39	0/0:10,0:10:24.08:0,24,461	./.	0/0:37,0:37:30.10:0,30,542	0/0:8,0:8:6.02:0,6,115	0/0:7,0:7:3.01:0,3,58	1/1:7,2:9:6.02:79,6,0	0/0:6,0:9:9.03:0,9,118	0/0:7,0:11:12.04:0,12,157	1/1:5,3:8:9.03:119,9,0	0/0:7,0:7:6.02:0,6,115	0/0:5,0:5:3.01:0,3,58	0/0:22,2:24:8.56:0,9,825	0/0:20,0:20:40.69:0,41,748	0/0:8,0:8:12.04:0,12,231	1/1:4,3:7:6.02:79,6,0	0/0:2,0:2:6.02:0,6,115	./.	./.	0/0:5,0:5:3.01:0,3,58	0/1:14,4:18:64.17:64,0,158	0/0:2,0:5:9.03:0,9,113	0/0:9,0:9:6.02:0,6,115	0/0:3,0:3:6.02:0,6,101
chr10	101733914	.	C	CT	784.62	PASS	AB=0.600;AC=13;AF=0.232;AN=56;BaseQRankSum=-3.484;DP=390;FS=17.357;HRun=14;HaplotypeScore=46.3084;InbreedingCoeff=0.7648;MQ=78.50;MQ0=9;MQRankSum=-1.137;QD=9.34;ReadPosRankSum=-0.427;VQSLOD=0.8269;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,19:29:23.83:452,24,0	0/0:1,0:7:8.12:0,8,23	0/0:41,0:23:27.67:0,28,157	0/0:21,0:9:2.19:0,2,9	0/1:3,4:9:4.59:66,0,5	0/0:11,0:12:28.63:0,29,179	0/0:6,0:6:8.84:0,9,58	0/0:21,0:21:42.85:0,43,270	0/0:9,0:9:20.67:0,21,134	0/0:9,0:9:23.63:0,24,152	0/0:8,0:8:11.76:0,12,76	1/1:2,14:17:11.84:93,12,0	1/1:1,8:9:15:132,15,0	1/1:2,5:7:9:79,9,0	0/0:10,0:10:26.54:0,27,172	0/0:2,0:8:10.14:0,10,29	0/0:28,0:31:73.17:0,73,453	0/0:28,0:29:58.04:0,58,368	0/0:16,0:16:29.44:0,29,192	0/0:9,0:9:14.62:0,15,92	0/0:9,0:9:17.67:0,18,114	0/0:7,0:7:17.73:0,18,115	0/0:6,0:6:11.65:0,12,72	0/0:21,0:25:42.40:0,42,261	0/0:13,2:15:6.08:0,6,162	1/1:3,8:11:17.06:127,17,0	0/0:6,0:7:13.81:0,14,82	1/1:2,0:2:2.04:6,2,0
chr10	101733999	.	G	GTAAGTC	571.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.842;DP=382;FS=1.642;HRun=0;HaplotypeScore=84.7822;InbreedingCoeff=0.9426;MQ=92.29;MQ0=0;MQRankSum=-4.821;QD=47.66;ReadPosRankSum=0.332;VQSLOD=3.4986;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:45.15:0,45,1020	0/0:9,0:9:24.08:0,24,548	0/0:19,0:19:45.14:0,45,983	0/0:16,0:16:39.13:0,39,820	0/0:12,0:12:36.11:0,36,779	0/0:14,0:14:39.13:0,39,868	0/0:13,0:13:21.07:0,21,480	0/0:24,0:24:54.18:0,54,1167	0/0:11,0:11:27.09:0,27,617	0/0:8,0:8:21.07:0,21,480	0/0:5,0:5:12.04:0,12,274	0/0:8,0:8:21.07:0,21,457	0/0:14,0:14:36.12:0,36,822	0/0:11,0:11:27.09:0,27,616	0/0:19,0:19:45.15:0,45,1027	0/0:19,0:19:49:0,49,1182	0/0:24,0:23:63.22:0,63,1406	1/1:6,6:12:21.07:664,21,0	0/0:19,0:19:51.16:0,51,1053	0/0:8,0:8:24.08:0,24,548	0/0:9,0:9:21.07:0,21,480	0/0:9,0:9:27.09:0,27,617	0/0:12,0:12:33.11:0,33,737	0/0:16,0:16:33.11:0,33,738	0/0:11,0:11:30.10:0,30,685	0/0:11,0:11:27.09:0,27,617	0/0:13,0:13:39.13:0,39,868	0/0:17,0:17:51.18:0,51,1165
chr10	101735927	.	T	TAC	1683.13	PASS	AB=0.762;AC=8;AF=0.143;AN=56;BaseQRankSum=-7.644;DP=754;FS=21.791;HRun=0;HaplotypeScore=98.5456;InbreedingCoeff=-0.0465;MQ=61.61;MQ0=8;MQRankSum=-0.054;QD=7.79;ReadPosRankSum=-0.611;VQSLOD=1.5535;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:12,14:27:3.35:383,0,3	0/0:5,0:11:11.36:0,11,56	0/0:28,0:18:3.01:0,3,34	0/0:26,0:19:2.95:0,3,19	0/1:15,16:31:43.89:388,0,44	0/0:20,1:25:35.76:0,36,358	0/1:26,0:27:27.49:27,0,299	0/0:29,0:27:26.65:0,27,263	0/0:24,0:23:45.07:0,45,498	0/0:42,0:42:78.19:0,78,866	0/1:17,1:22:16.03:16,0,255	0/1:14,15:29:99:321,0,130	0/1:11,17:28:16.66:341,0,17	0/1:11,15:24:6.81:334,0,7	0/0:36,0:36:81.05:0,81,885	0/0:11,0:28:28.41:0,28,140	0/0:26,0:26:54.13:0,54,598	0/0:22,0:22:37.18:0,37,390	0/0:17,0:17:24.07:0,24,271	0/1:22,2:25:0.86:1,0,363	0/0:39,0:39:69.17:0,69,766	0/0:22,0:23:51.26:0,51,526	0/0:24,0:24:44.06:0,44,433	0/0:27,1:28:29.06:0,29,734	0/0:30,0:30:50.55:0,51,598	0/0:11,0:27:47.63:0,48,229	0/0:32,0:32:65.89:0,66,707	0/0:3,0:20:28.41:0,28,139
chr10	101736535	.	C	CT	624.60	PASS	AB=0.969;AC=9;AF=0.161;AN=56;BaseQRankSum=-2.905;DP=761;FS=5.109;HRun=12;HaplotypeScore=87.8544;InbreedingCoeff=0.3366;MQ=71.03;MQ0=4;MQRankSum=1.459;QD=3.12;ReadPosRankSum=-1.060;VQSLOD=0.3853;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,2:33:21.31:0,21,465	1/1:4,11:16:10.98:255,11,0	0/1:42,1:23:27.69:28,0,109	0/1:21,0:16:14.41:14,0,92	0/0:24,1:27:22.48:0,22,306	0/0:20,0:21:52.60:0,53,370	0/0:19,0:21:36.82:0,37,252	0/0:37,1:39:47.16:0,47,496	0/1:32,0:32:4.64:5,0,362	0/1:27,1:28:11.30:11,0,344	0/1:24,3:28:60.65:61,0,214	0/0:40,0:40:86.22:0,86,627	0/0:33,0:36:42.52:0,43,434	0/0:20,1:22:14.72:0,15,238	0/0:28,0:30:73.57:0,74,527	1/1:7,20:29:22.20:396,22,0	0/0:26,0:26:68.35:0,68,485	0/0:0,0:21:31.44:0,31,91	0/0:17,0:19:35.91:0,36,236	0/0:27,1:29:38.34:0,38,429	0/0:16,0:16:30.39:0,30,197	0/0:22,0:24:54.59:0,55,381	0/0:28,0:29:41.08:0,41,301	0/0:27,0:26:65.22:0,65,470	0/0:26,2:28:33.36:0,33,401	0/0:35,0:35:45.32:0,45,493	0/0:27,0:27:24.15:0,24,311	0/0:10,0:11:8.82:0,9,65
chr10	101737498	.	GCA	G	1298.41	PASS	AB=0.902;AC=18;AF=0.333;AN=54;BaseQRankSum=4.058;DP=523;FS=13.042;HRun=0;HaplotypeScore=65.7667;InbreedingCoeff=0.0009;MQ=65.59;MQ0=18;MQRankSum=0.810;QD=4.37;ReadPosRankSum=-0.971;VQSLOD=0.4848;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,7:37:50.93:534,51,0	0/0:1,0:4:3:0,3,26	0/0:31,0:18:0.47:0,0,1	./.	0/1:6,8:13:27.15:88,0,27	0/1:15,1:16:4.55:5,0,187	0/0:20,1:21:19.86:0,20,582	0/1:27,0:26:47.61:48,0,102	0/0:20,0:18:38.71:0,39,487	0/0:19,0:19:33.10:0,33,470	0/1:11,3:14:9.34:9,0,232	0/1:12,7:20:30.04:99,0,30	1/1:9,11:20:21.05:226,21,0	1/1:12,3:16:29.91:314,30,0	0/1:6,0:6:24.07:24,0,74	0/0:10,0:21:24.02:0,24,248	0/1:18,2:20:33.65:34,0,369	0/0:8,0:8:5.50:0,6,43	0/0:12,0:11:12.03:0,12,150	0/0:13,0:13:21.07:0,21,315	0/1:35,0:30:10.01:10,0,509	0/1:6,0:7:39.56:40,0,157	0/1:10,0:10:3.72:4,0,80	0/1:38,2:40:11.14:11,0,955	0/0:20,0:21:36.06:0,36,481	0/0:12,0:22:45.06:0,45,478	0/1:10,0:10:18.33:18,0,162	0/0:7,0:13:8.99:0,9,76
chr10	101737534	.	AC	A	123.96	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.350;DP=640;FS=0.000;HRun=2;HaplotypeScore=80.2788;InbreedingCoeff=0.5968;MQ=56.92;MQ0=27;MQRankSum=-2.136;QD=12.40;ReadPosRankSum=-1.442;VQSLOD=1.7045;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:64.58:0,65,480	0/0:7,0:7:14.98:0,15,162	0/0:28,0:15:9.59:0,10,404	0/0:33,0:10:17.98:0,18,179	0/0:23,1:23:11.41:0,11,477	0/0:20,1:19:22.17:0,22,417	0/0:27,0:27:73.01:0,73,944	0/0:23,0:18:52.59:0,53,634	0/0:24,0:23:61.75:0,62,842	0/0:21,0:21:57.09:0,57,748	0/0:22,0:22:53.62:0,54,690	0/0:16,0:16:30.93:0,31,318	0/0:21,1:22:28.82:0,29,309	0/0:20,0:19:44.80:0,45,357	0/0:19,0:19:53.66:0,54,691	0/0:21,0:20:44.99:0,45,487	0/0:25,1:24:49.73:0,50,805	1/1:3,7:10:1.11:199,1,0	0/0:17,0:15:45.12:0,45,560	0/0:17,0:16:42.14:0,42,589	0/0:41,0:36:85.19:0,85,1126	0/0:15,0:15:41.21:0,41,495	0/0:13,0:13:26.57:0,27,337	0/0:40,2:41:99:0,104,1413	0/0:35,1:36:93.12:0,93,1164	0/0:34,0:34:92.99:0,93,1031	0/0:13,0:13:32.29:0,32,410	0/0:9,0:9:11.99:0,12,125
chr10	101738909	.	C	CA	5646.74	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=16.427;DP=619;FS=17.350;HRun=8;HaplotypeScore=82.8675;InbreedingCoeff=0.9133;MQ=76.12;MQ0=0;MQRankSum=-1.369;QD=26.02;ReadPosRankSum=-0.903;VQSLOD=3.3232;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,32:38:87.05:969,87,0	0/0:11,0:11:33.02:0,33,302	0/1:12,0:12:20.97:21,0,154	0/0:11,0:11:14.87:0,15,122	1/1:5,25:30:72.21:831,72,0	0/0:25,0:25:69.03:0,69,632	0/0:18,0:18:54.03:0,54,494	0/0:22,0:22:60.02:0,60,546	0/0:17,0:17:51:0,51,460	0/0:16,0:16:33.01:0,33,302	0/0:21,0:21:60.02:0,60,545	1/1:1,16:17:42.12:485,42,0	1/1:3,17:20:45.13:517,45,0	1/1:4,29:33:84.25:966,84,0	0/0:25,0:25:63.02:0,63,576	0/0:18,0:18:42.01:0,42,384	0/0:31,0:31:90.05:0,90,824	1/1:8,18:26:53.96:589,54,0	0/0:23,0:23:60:0,60,540	0/0:25,0:25:69.02:0,69,627	0/0:12,0:12:33:0,33,297	0/0:19,0:19:54.03:0,54,494	0/0:18,0:19:53.06:0,53,473	0/0:34,0:34:96:0,96,870	0/0:28,0:28:81.04:0,81,740	1/1:2,30:32:84.23:957,84,0	0/0:27,0:27:42.04:0,42,626	1/1:0,9:9:27.08:312,27,0
chr10	101739992	.	G	GTTTCATGGTCT	6076.96	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.199;DP=746;FS=1.189;HRun=0;HaplotypeScore=232.6481;InbreedingCoeff=0.9958;MQ=83.65;MQ0=0;MQRankSum=-8.759;QD=119.16;ReadPosRankSum=-2.291;VQSLOD=4.0387;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,4258	0/0:9,0:9:24.08:0,24,787	0/0:24,0:24:63.19:0,63,1774	0/0:24,0:24:25.48:0,25,1547	0/0:31,0:31:93.32:0,93,3256	0/0:19,0:19:48.16:0,48,1713	0/0:37,0:37:99:0,102,3420	0/0:32,0:32:93.32:0,93,3075	0/0:23,0:23:69.24:0,69,2301	0/0:36,0:36:99:0,105,3398	0/0:23,0:23:69.23:0,69,2284	0/0:29,0:29:87.26:0,87,2851	0/0:29,0:29:87.28:0,87,2961	0/0:33,0:33:93.32:0,93,3105	0/0:35,0:35:99:0,105,3528	0/0:35,0:35:99:0,102,3248	0/0:31,0:31:87.26:0,87,2789	1/1:11,6:18:39.13:1776,39,0	0/0:18,0:18:54.18:0,54,1681	0/0:30,0:30:90.31:0,90,3204	0/0:32,0:32:96.33:0,96,3333	0/0:22,0:22:63.20:0,63,2087	0/0:24,0:24:72.25:0,72,2481	0/0:30,0:30:87.30:0,87,2769	0/0:24,0:24:72.25:0,72,2520	1/1:10,12:26:75.22:3600,75,0	0/0:21,0:21:57.19:0,57,1791	1/1:3,3:7:18.02:700,18,0
chr10	101740074	.	A	ACT	1721.34	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.259;DP=665;FS=17.006;HRun=0;HaplotypeScore=78.7916;InbreedingCoeff=0.9475;MQ=88.84;MQ0=0;MQRankSum=-2.536;QD=47.82;ReadPosRankSum=0.171;VQSLOD=3.2272;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1604	1/1:1,7:8:24.08:448,24,0	0/0:22,0:22:60.19:0,60,862	0/0:27,0:27:77.89:0,78,1042	0/0:28,0:28:84.27:0,84,1213	0/0:24,0:24:72.23:0,72,1035	0/0:20,0:20:57.19:0,57,839	0/0:28,0:28:81.26:0,81,1159	0/0:30,0:30:90.29:0,90,1305	0/0:23,0:23:66.21:0,66,953	0/0:22,0:22:63.21:0,63,927	0/0:28,0:28:81.27:0,81,1192	0/0:26,0:26:78.26:0,78,1149	0/0:28,0:28:81.25:0,81,1170	0/0:29,0:29:84.28:0,84,1233	1/1:3,24:28:75.26:1395,75,0	0/0:24,0:24:72.22:0,72,1035	0/0:20,0:20:54.18:0,54,791	0/0:21,0:21:57.19:0,57,838	0/0:27,0:27:78.26:0,78,1146	0/0:34,0:34:99:0,99,1388	0/0:20,0:20:57.19:0,57,839	0/0:20,0:20:57.18:0,57,819	0/0:27,0:27:78.26:0,78,1148	0/0:19,0:19:51.16:0,51,732	0/0:21,0:21:54.18:0,54,795	0/0:21,0:21:63.21:0,63,926	0/0:2,0:2:6.02:0,6,88
chr10	101741361	.	ATG	A	3463.08	PASS	AB=0.875;AC=21;AF=0.375;AN=56;BaseQRankSum=10.029;DP=669;FS=0.822;HRun=0;HaplotypeScore=83.4420;InbreedingCoeff=0.4447;MQ=63.90;MQ0=13;MQRankSum=0.730;QD=10.89;ReadPosRankSum=2.910;VQSLOD=3.3537;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,8:26:9.84:349,10,0	1/1:1,7:8:15.04:175,15,0	0/0:39,0:15:3:0,3,47	0/0:33,0:16:21.03:0,21,275	1/1:8,10:20:32.59:322,33,0	0/0:27,0:27:57.19:0,57,879	0/1:22,1:22:1.89:2,0,428	0/1:19,2:20:45.94:46,0,258	0/0:23,1:23:48.16:0,48,741	0/1:27,0:27:21.88:22,0,574	0/0:20,1:21:10.15:0,10,622	1/1:4,22:28:65.86:728,66,0	1/1:7,18:24:7.16:548,7,0	1/1:5,16:23:50.81:553,51,0	0/0:29,1:30:34.23:0,34,990	1/1:6,21:27:35.83:399,36,0	0/1:19,4:23:0.68:1,0,412	0/1:7,9:16:9.77:249,0,10	0/1:26,3:29:50.85:51,0,650	0/0:36,1:37:34.23:0,34,992	0/0:21,2:23:10.15:0,10,616	0/0:14,0:15:21.97:0,22,493	0/0:20,1:20:7.14:0,7,566	0/1:15,2:18:18.88:19,0,626	0/0:19,0:19:39.13:0,39,609	0/0:8,0:15:24.13:0,24,177	0/0:34,2:34:20.30:0,20,1239	0/0:5,0:8:4.68:0,5,73
chr10	101741879	.	A	AG	1214.53	PASS	AB=0.542;AC=3;AF=0.054;AN=56;BaseQRankSum=6.701;DP=686;FS=3.485;HRun=1;HaplotypeScore=81.2304;InbreedingCoeff=0.6729;MQ=86.18;MQ0=0;MQRankSum=-2.504;QD=34.70;ReadPosRankSum=1.625;VQSLOD=3.7642;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.23:0,78,1057	0/0:16,0:16:45.15:0,45,628	0/0:19,0:19:54.18:0,54,740	0/0:27,0:27:75.18:0,75,931	0/0:40,0:40:99:0,117,1619	0/0:24,0:24:69.17:0,69,923	0/0:16,0:16:48.16:0,48,672	0/0:42,0:41:99:0,126,1732	0/0:24,0:24:72.24:0,72,1005	0/0:21,0:21:60.19:0,60,821	0/0:22,0:22:66.22:0,66,922	0/0:28,0:28:84.28:0,84,1173	0/0:35,0:35:99:0,105,1467	0/0:21,0:21:63.19:0,63,859	0/0:29,0:29:87.29:0,87,1215	0/0:27,0:27:78.20:0,78,1049	0/0:20,0:20:60.19:0,60,818	0/0:11,0:11:33.10:0,33,444	0/0:21,0:21:57.18:0,57,783	0/0:30,0:30:90.30:0,90,1259	0/0:25,0:25:72.22:0,72,988	0/0:25,0:25:72.24:0,72,1007	0/0:30,0:30:90.30:0,90,1256	0/0:22,0:22:66.22:0,66,923	0/0:27,0:27:81.27:0,81,1133	0/1:4,22:26:11.70:983,0,12	0/0:22,0:22:66.20:0,66,892	1/1:2,7:9:21.07:336,21,0
chr10	101742849	.	CT	C	375.45	PASS	AB=0.907;AC=7;AF=0.125;AN=56;BaseQRankSum=5.122;DP=626;FS=2.186;HRun=11;HaplotypeScore=77.7999;InbreedingCoeff=0.4566;MQ=73.16;MQ0=0;MQRankSum=-0.409;QD=4.58;ReadPosRankSum=-1.446;VQSLOD=1.1847;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,107,604	0/0:4,0:4:6.02:0,6,64	0/1:18,1:15:8.68:9,0,232	0/0:14,0:14:18.48:0,18,171	0/0:38,0:38:40.50:0,41,376	0/0:17,0:17:44.58:0,45,444	0/0:24,1:25:41.52:0,42,647	0/0:21,0:21:39.10:0,39,416	0/0:24,0:24:63.12:0,63,648	0/0:26,1:27:41.50:0,42,631	0/0:27,0:29:74.84:0,75,750	0/0:13,0:13:34.58:0,35,193	0/0:25,0:25:11.84:0,12,239	0/0:26,0:26:61.20:0,61,310	0/0:23,0:23:59.18:0,59,614	0/0:29,0:29:78.05:0,78,781	0/0:27,1:28:26.03:0,26,687	0/0:0,0:9:15.09:0,15,73	0/1:17,3:21:22.97:23,0,366	0/0:23,0:24:62.97:0,63,639	0/0:17,0:17:33.08:0,33,352	0/0:18,0:21:50.90:0,51,498	0/0:19,0:19:51.11:0,51,529	0/0:32,0:32:66.10:0,66,676	0/1:15,2:17:1.18:1,0,393	1/1:4,19:23:33.62:441,34,0	0/0:35,0:37:65.52:0,66,873	1/1:1,1:2:2.99:25,3,0
chr10	101745140	.	A	AT	821.25	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.835;DP=639;FS=2.306;HRun=8;HaplotypeScore=57.7528;InbreedingCoeff=0.9972;MQ=83.47;MQ0=0;MQRankSum=-2.511;QD=24.15;ReadPosRankSum=-0.873;VQSLOD=4.0791;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.02:0,42,384	0/0:20,0:20:51.01:0,51,462	0/0:22,0:22:44.50:0,45,422	0/0:16,0:16:30.99:0,31,312	0/0:34,0:34:90.02:0,90,818	0/0:28,1:29:43.40:0,43,647	0/0:15,0:15:42.02:0,42,384	0/0:33,0:33:81.01:0,81,730	0/0:18,0:18:51.03:0,51,466	0/0:26,0:26:69.03:0,69,631	0/0:23,0:23:59.82:0,60,548	0/0:15,0:15:42.02:0,42,384	0/0:27,0:27:75.03:0,75,686	0/0:20,0:20:54.03:0,54,494	0/0:26,0:26:72.04:0,72,659	0/0:20,0:20:57.02:0,57,522	0/0:12,0:12:30.01:0,30,274	0/0:29,0:29:81.02:0,81,735	0/0:17,0:17:48.03:0,48,439	0/0:30,0:30:87.02:0,87,788	0/0:13,0:13:39.02:0,39,357	0/0:28,0:28:78.02:0,78,710	0/0:36,0:36:99:0,99,906	0/0:19,0:18:50.98:0,51,459	0/0:29,1:30:40.40:0,40,619	1/1:5,21:26:38.73:699,39,0	0/0:31,0:30:75.03:0,75,686	1/1:1,7:8:21.06:242,21,0
chr10	101747530	.	AT	A	4358.76	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.596;DP=736;FS=11.729;HRun=9;HaplotypeScore=76.2831;InbreedingCoeff=0.9958;MQ=71.60;MQ0=0;MQRankSum=0.246;QD=22.58;ReadPosRankSum=2.618;VQSLOD=5.1044;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,49:51:99:1180,129,0	0/0:2,0:9:22.88:0,23,126	0/0:15,0:14:31.91:0,32,346	0/0:13,0:13:17.36:0,17,154	1/1:0,24:24:54.01:494,54,0	0/0:22,0:22:51.15:0,51,588	0/0:28,0:28:69.16:0,69,766	0/0:23,0:23:54.16:0,54,623	0/0:26,0:26:33.69:0,34,675	0/0:19,0:19:51.15:0,51,581	0/0:22,0:23:59.96:0,60,628	1/1:4,26:30:75.03:685,75,0	1/1:3,29:32:72.09:730,72,0	1/1:2,39:41:99:961,105,0	0/0:45,0:45:99:0,126,1407	0/0:5,0:34:77.03:0,77,422	0/0:29,0:29:69.21:0,69,796	1/1:2,13:15:35.23:309,35,0	0/0:17,0:17:42.11:0,42,470	0/0:28,0:28:69.16:0,69,779	0/0:34,0:34:84.19:0,84,937	0/0:22,0:22:57.11:0,57,625	0/0:20,0:20:57.15:0,57,647	0/0:33,0:33:93.24:0,93,1051	0/0:30,0:30:81.24:0,81,934	0/0:28,0:28:54.76:0,55,821	0/0:39,0:38:99:0,111,1225	0/0:6,0:6:18.05:0,18,208
chr10	101747683	.	TGGGA	T	1982.71	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.347;DP=604;FS=25.156;HRun=0;HaplotypeScore=105.5695;InbreedingCoeff=0.9782;MQ=60.90;MQ0=0;MQRankSum=0.309;QD=35.41;ReadPosRankSum=2.904;VQSLOD=1.9087;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,2697	1/1:1,5:6:15.05:250,15,0	0/0:17,0:16:23.95:0,24,615	0/0:23,0:21:54.16:0,54,1029	0/0:10,0:10:30.09:0,30,723	0/0:29,0:29:78.25:0,78,1870	0/0:27,0:27:66.23:0,66,1663	0/0:24,0:24:54.17:0,54,1151	0/0:21,0:21:51.18:0,51,1286	0/0:18,0:18:39.13:0,39,961	0/0:17,0:17:41.37:0,41,895	0/0:22,0:22:60.20:0,60,1446	0/0:21,0:21:63.19:0,63,1495	0/0:26,0:26:75.22:0,75,1739	0/0:24,0:24:60.20:0,60,1457	1/1:3,22:25:45.15:784,45,0	0/0:31,0:31:85.14:0,85,2057	0/0:20,0:19:48.16:0,48,1160	0/0:17,0:17:51.16:0,51,1156	0/0:19,0:19:48.16:0,48,1211	0/0:27,0:27:69.14:0,69,1661	0/0:21,0:21:60.20:0,60,1282	0/0:28,0:28:75.26:0,75,1871	0/0:18,0:18:48.15:0,48,1121	0/0:17,0:17:48.15:0,48,1113	1/1:2,19:21:32.52:943,33,0	0/0:31,0:31:87.26:0,87,2069	1/1:0,4:4:9.03:160,9,0
chr10	101748285	.	GCTGA	G	1274.60	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.467;DP=485;FS=4.091;HRun=0;HaplotypeScore=118.7167;InbreedingCoeff=0.9841;MQ=53.89;MQ0=6;MQRankSum=-3.055;QD=47.21;ReadPosRankSum=2.580;VQSLOD=4.5825;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:66.23:0,66,1746	0/0:5,0:5:15.05:0,15,390	0/0:16,0:6:18.06:0,18,462	0/0:18,0:11:31.35:0,31,773	0/0:21,0:21:57.20:0,57,1477	0/0:13,0:13:39.13:0,39,1039	0/0:21,0:21:57.20:0,57,1520	0/0:16,0:14:39.11:0,39,946	0/0:15,0:15:45.15:0,45,1180	0/0:21,0:21:63.22:0,63,1643	0/0:16,0:16:42.13:0,42,1042	0/0:16,0:16:45.15:0,45,1199	0/0:9,0:9:24.08:0,24,639	0/0:17,0:17:45.15:0,45,1197	0/0:23,0:23:63.22:0,63,1680	0/0:19,0:19:54.19:0,54,1438	0/0:26,0:26:72.22:0,72,1804	0/0:18,0:18:50.91:0,51,1360	0/0:7,0:7:21.07:0,21,560	0/0:19,0:19:51.17:0,51,1282	0/0:28,0:28:69.24:0,69,1816	0/0:12,0:12:33.11:0,33,836	0/0:13,0:13:39.11:0,39,981	0/0:25,0:25:72.25:0,72,1882	0/0:24,0:24:66.23:0,66,1759	1/1:1,15:16:45.14:780,45,0	0/0:13,0:13:39.13:0,39,1020	1/1:0,11:11:33.11:616,33,0
chr10	101748897	.	G	GA	448.77	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.748;DP=711;FS=3.605;HRun=7;HaplotypeScore=69.4867;InbreedingCoeff=0.9449;MQ=84.57;MQ0=0;MQRankSum=-3.577;QD=28.05;ReadPosRankSum=0.302;VQSLOD=4.3819;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.13:0,87,840	0/0:11,0:11:33.05:0,33,319	0/0:18,0:18:51.07:0,51,489	0/0:26,0:26:58.69:0,59,500	0/0:30,0:30:87.14:0,87,840	0/0:25,0:25:66.08:0,66,631	0/0:22,0:22:63.08:0,63,602	0/0:33,0:33:87.09:0,87,824	0/0:31,0:31:78.12:0,78,753	0/0:35,0:35:99:0,99,952	0/0:30,0:30:78.12:0,78,753	0/0:25,0:25:57.07:0,57,550	0/0:21,0:21:57.06:0,57,539	0/0:27,0:27:75.09:0,75,718	0/0:32,0:32:87.11:0,87,833	0/0:24,0:24:69.11:0,69,666	0/0:30,0:30:87.12:0,87,833	1/1:0,16:16:45.14:544,45,0	0/0:22,0:22:57.08:0,57,550	0/0:36,0:36:96.13:0,96,921	0/0:28,0:27:78.09:0,78,741	0/0:21,0:21:63.08:0,63,601	0/0:24,0:24:69.10:0,69,661	0/0:27,0:27:78.11:0,78,748	0/0:22,0:22:51.07:0,51,493	0/0:36,0:36:99:0,99,951	0/0:25,0:25:66.10:0,66,637	0/0:3,0:3:9.01:0,9,87
chr10	101749102	.	TAGGAC	T	480.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.463;DP=706;FS=2.948;HRun=0;HaplotypeScore=132.7235;InbreedingCoeff=0.9814;MQ=80.25;MQ0=0;MQRankSum=-3.809;QD=48.09;ReadPosRankSum=-0.354;VQSLOD=3.7457;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,3091	0/0:9,0:9:24.08:0,24,744	0/0:16,0:17:48.62:0,49,1397	0/0:18,0:18:48.16:0,48,1453	0/0:28,0:28:81.28:0,81,2500	0/0:25,0:25:75.26:0,75,2325	0/0:29,0:29:84.29:0,84,2629	0/0:22,0:22:63.22:0,63,1953	0/0:31,0:31:84.29:0,84,2587	0/0:32,0:32:93.32:0,93,2890	0/0:24,0:24:66.23:0,66,2022	0/0:27,0:27:78.27:0,78,2432	0/0:19,0:19:54.19:0,54,1689	0/0:24,0:24:69.24:0,69,2104	0/0:32,0:32:96.33:0,96,2940	0/0:24,0:24:72.25:0,72,2211	0/0:34,0:34:96.30:0,96,2903	1/1:0,10:10:27.09:575,27,0	0/0:14,0:14:36.12:0,36,1115	0/0:27,0:27:75.26:0,75,2348	0/0:33,0:33:99:0,99,3057	0/0:21,0:21:60.21:0,60,1844	0/0:37,0:37:99:0,108,3258	0/0:28,0:28:84.29:0,84,2619	0/0:32,0:32:93.32:0,93,2899	0/0:35,0:35:99:0,105,3223	0/0:31,0:30:90.31:0,90,2795	0/0:5,0:5:15.05:0,15,470
chr10	101749574	.	GAC	G	347.09	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.172;DP=714;FS=2.096;HRun=0;HaplotypeScore=101.4151;InbreedingCoeff=0.9968;MQ=87.35;MQ0=0;MQRankSum=-3.253;QD=31.55;ReadPosRankSum=-1.732;VQSLOD=5.2344;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:70.25:0,70,865	0/0:12,0:12:36.04:0,36,366	0/0:29,0:29:74.01:0,74,1481	0/0:22,0:22:45.63:0,46,1086	0/0:31,0:31:89.99:0,90,870	0/0:29,0:29:87.30:0,87,1679	0/0:17,0:17:45.15:0,45,868	0/0:26,0:26:75.26:0,75,1428	0/0:28,0:28:81.26:0,81,1514	0/0:28,0:28:81.26:0,81,1528	0/0:27,0:27:78.25:0,78,1460	0/0:21,0:21:56.84:0,57,543	0/0:29,0:29:33.07:0,33,666	0/0:29,0:29:80.24:0,80,795	0/0:27,0:27:78.27:0,78,1493	0/0:22,0:22:63.06:0,63,590	0/0:34,0:34:99:0,102,1915	1/1:0,11:11:30.10:442,30,0	0/0:16,0:16:45.61:0,46,834	0/0:36,0:36:99:0,105,2015	0/0:33,0:33:99:0,99,1832	0/0:25,0:25:75.24:0,75,1402	0/0:29,0:29:84.29:0,84,1621	0/0:19,0:19:57.20:0,57,1101	0/0:21,0:21:63.20:0,63,1184	0/0:28,0:28:80.07:0,80,753	0/0:45,0:45:99:0,135,2605	0/0:9,0:9:23.57:0,24,237
chr10	101750602	.	AGGGGGG	A	5536.38	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=5.933;DP=391;FS=10.705;HRun=13;HaplotypeScore=107.4819;InbreedingCoeff=0.9325;MQ=77.17;MQ0=2;MQRankSum=-8.678;QD=45.38;ReadPosRankSum=9.289;VQSLOD=1.9440;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,9:11:23.92:431,24,0	1/1:0,7:7:21.07:411,21,0	0/0:37,0:22:33.52:0,34,841	0/0:23,0:19:24.68:0,25,672	1/1:7,19:26:57.11:1115,57,0	0/0:6,0:7:14.99:0,15,464	0/0:9,0:9:24.08:0,24,766	0/0:6,0:6:3.01:0,3,39	0/0:10,0:10:15.05:0,15,414	0/0:10,0:10:9.03:0,9,268	0/0:14,0:15:27.08:0,27,770	1/1:2,8:10:24.07:470,24,0	1/1:2,13:15:36.12:704,36,0	1/1:2,9:10:24.07:470,24,0	0/0:13,0:16:33.11:0,33,981	1/1:2,12:13:33.08:646,33,0	0/0:13,0:19:15.05:0,15,429	0/0:5,0:13:27.09:0,27,414	0/0:12,0:18:33.11:0,33,845	0/0:15,0:16:33.07:0,33,848	0/0:6,0:8:6.02:0,6,166	0/0:8,0:10:18.06:0,18,473	0/0:12,0:12:18.06:0,18,508	0/0:8,0:8:21.03:0,21,574	0/0:14,0:15:27.09:0,27,759	1/1:5,16:21:51.14:996,51,0	0/0:16,0:16:27.09:0,27,796	1/1:0,7:7:15.05:294,15,0
chr10	101750640	.	C	CT	2181.58	PASS	AB=0.955;AC=16;AF=0.286;AN=56;BaseQRankSum=8.364;DP=428;FS=2.818;HRun=10;HaplotypeScore=112.8796;InbreedingCoeff=0.7563;MQ=71.21;MQ0=1;MQRankSum=-9.186;QD=15.47;ReadPosRankSum=0.619;VQSLOD=3.5349;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,5:7:15:147,15,0	0/0:0,0:5:10.19:0,10,30	0/1:19,0:14:39.50:40,0,50	0/0:24,0:17:2.56:0,3,91	1/1:8,25:33:47.16:708,47,0	0/0:9,0:9:23.84:0,24,188	0/0:11,0:11:32.94:0,33,268	0/0:21,1:22:21.95:0,22,386	0/0:14,0:14:19.91:0,20,154	0/0:11,0:12:26.95:0,27,222	0/0:11,0:11:32.59:0,33,245	1/1:5,6:11:21.01:210,21,0	1/1:4,12:16:39.06:403,39,0	1/1:9,4:12:19.12:171,19,0	0/0:20,0:20:9.89:0,10,286	0/0:3,0:19:35.87:0,36,119	0/0:16,0:16:32.74:0,33,259	0/0:18,0:19:55.92:0,56,441	0/0:18,0:18:38.91:0,39,320	0/0:20,0:22:28.37:0,28,250	0/0:9,0:9:8.84:0,9,64	0/1:9,1:10:25.61:26,0,102	0/0:13,0:13:32.94:0,33,270	0/0:6,0:6:11.98:0,12,97	0/0:16,0:16:30.85:0,31,231	1/1:8,19:27:35.64:566,36,0	0/0:19,0:19:38.85:0,39,311	1/1:1,3:4:11.86:109,12,0
chr10	101750699	.	T	TC	3010.16	PASS	AB=0.861;AC=16;AF=0.286;AN=56;BaseQRankSum=12.173;DP=502;FS=7.648;HRun=0;HaplotypeScore=87.3362;InbreedingCoeff=0.7603;MQ=44.56;MQ0=17;MQRankSum=-10.374;QD=20.76;ReadPosRankSum=4.177;VQSLOD=5.3749;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,10:16:34.10:441,34,0	1/1:1,6:7:21:243,21,0	0/0:21,0:3:5.99:0,6,51	0/0:16,0:5:0.33:0,0,37	1/1:11,15:25:60.01:618,60,0	0/0:13,0:12:30.06:0,30,366	0/0:11,0:11:23.57:0,24,206	0/0:18,0:15:39.88:0,40,430	0/0:18,0:18:51.14:0,51,643	0/0:22,0:21:60.18:0,60,789	0/0:18,0:18:47.83:0,48,542	1/1:6,10:16:28.11:384,28,0	1/1:9,12:19:14.26:358,14,0	0/1:8,5:13:8.66:210,0,9	0/0:18,0:18:54.17:0,54,725	1/1:4,11:15:3.12:419,3,0	0/0:29,0:29:69.12:0,69,906	0/0:24,0:21:62.47:0,62,723	0/0:22,0:16:44.88:0,45,471	0/0:24,0:23:65.99:0,66,821	0/1:7,0:7:0.03:0,0,99	0/0:12,0:12:32.88:0,33,383	0/0:29,0:28:75.11:0,75,777	0/0:13,0:13:14.63:0,15,299	0/0:20,0:19:51.59:0,52,669	1/1:10,12:21:40.18:525,40,0	0/0:27,0:25:59.94:0,60,738	0/0:2,0:2:2.51:0,3,7
chr10	101750707	.	C	CT	294.54	PASS	AB=0.972;AC=20;AF=0.357;AN=56;BaseQRankSum=3.786;DP=502;FS=7.692;HRun=16;HaplotypeScore=98.1264;InbreedingCoeff=0.1306;MQ=44.99;MQ0=16;MQRankSum=-4.672;QD=1.06;ReadPosRankSum=-0.565;VQSLOD=-0.6283;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:15:5.85:25,6,0	0/0:9,0:9:8.80:0,9,52	0/0:17,0:1:2.90:0,3,16	0/1:16,0:4:0:0,0,0	1/1:25,0:24:13.72:59,14,0	0/1:11,0:11:8.21:71,0,8	1/1:1,7:8:11.96:94,12,0	0/0:21,0:19:7.22:0,7,29	0/1:17,1:18:7.29:7,0,32	0/0:18,0:19:11.04:0,11,41	0/0:17,0:17:19.46:0,19,96	1/1:15,0:15:2.22:8,2,0	0/1:22,0:20:2.29:24,0,2	0/1:14,0:13:8.37:19,0,8	0/0:20,0:20:6.24:0,6,44	0/1:15,0:14:5.03:22,0,5	0/0:29,0:30:21.59:0,22,118	0/1:21,1:19:19.45:53,0,19	0/1:19,1:17:0.89:1,0,81	0/0:23,0:24:14.26:0,14,63	0/0:7,0:7:2.78:0,3,17	0/0:10,0:10:8.52:0,9,50	0/0:25,0:25:13.04:0,13,102	0/0:14,0:19:1.33:0,1,5	0/1:23,0:22:13.31:13,0,111	0/1:20,1:19:16.56:32,0,17	0/1:23,5:26:17.29:17,0,23	0/1:2,0:2:0:0,0,0
chr10	101751084	.	G	GAA	5390.16	PASS	AB=0.636;AC=17;AF=0.304;AN=56;BaseQRankSum=17.819;DP=698;FS=3.322;HRun=8;HaplotypeScore=105.0511;InbreedingCoeff=0.9101;MQ=77.40;MQ0=0;MQRankSum=-4.146;QD=24.06;ReadPosRankSum=2.207;VQSLOD=4.3012;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,27:41:73.98:1088,74,0	1/1:1,0:10:22.31:78,22,0	0/0:19,0:19:38.99:0,39,418	0/0:21,0:21:26.56:0,27,350	1/1:4,14:18:48.04:668,48,0	0/0:22,0:22:63.17:0,63,702	0/0:27,0:27:69.18:0,69,769	0/0:35,0:35:87.14:0,87,935	0/0:25,0:25:66.17:0,66,735	0/0:22,0:22:60.16:0,60,669	0/0:24,0:24:57.13:0,57,635	1/1:1,28:29:75.26:1187,75,0	1/1:5,0:27:55.54:192,56,0	1/1:3,33:38:99:1553,102,0	0/0:36,0:36:93.20:0,93,1028	1/1:6,0:29:21.26:146,21,0	0/0:21,0:21:51.10:0,51,557	0/0:13,0:13:39.06:0,39,421	0/0:20,0:20:42.06:0,42,459	0/0:34,0:34:72.06:0,72,802	0/0:24,0:24:66.17:0,66,736	0/0:23,0:23:63.14:0,63,693	0/0:26,0:26:63.16:0,63,702	0/0:26,0:26:66.14:0,66,736	0/0:27,0:27:75.19:0,75,836	0/1:9,0:21:18.81:364,0,19	0/0:29,0:29:81.21:0,81,903	1/1:3,0:11:12.02:114,12,0
chr10	101752313	.	CTA	C	1252.95	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.209;DP=606;FS=4.329;HRun=0;HaplotypeScore=86.1419;InbreedingCoeff=0.9951;MQ=77.81;MQ0=0;MQRankSum=-3.055;QD=33.86;ReadPosRankSum=1.674;VQSLOD=5.8864;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.13:0,63,1080	0/0:10,0:10:21.07:0,21,384	0/0:11,0:11:30.05:0,30,457	0/0:20,0:20:40.89:0,41,721	0/0:26,0:26:75.26:0,75,1366	0/0:35,0:35:99:0,102,1787	0/0:21,0:21:63.20:0,63,1124	0/0:47,0:47:99:0,126,2241	0/0:11,0:11:33.10:0,33,567	0/0:35,0:35:99:0,102,1842	0/0:23,0:23:66.20:0,66,1137	0/0:17,0:17:51.17:0,51,929	0/0:23,0:23:69.22:0,69,1214	0/0:15,0:15:45.13:0,45,757	0/0:21,0:21:60.21:0,60,1094	0/0:11,0:11:33.10:0,33,555	0/0:37,0:37:99:0,105,1886	0/0:24,0:24:69.22:0,69,1179	0/0:16,0:16:45.15:0,45,810	0/0:28,0:28:84.27:0,84,1497	0/0:17,0:17:45.15:0,45,824	0/0:12,0:12:33.11:0,33,599	0/0:22,0:22:63.19:0,63,1108	0/0:22,0:22:57.14:0,57,943	0/0:27,0:27:75.24:0,75,1321	1/1:3,26:29:75.25:1073,75,0	0/0:15,0:15:45.15:0,45,789	1/1:1,7:8:21.07:301,21,0
chr10	101752910	.	GGA	G	293.91	PASS	AB=0.970;AC=15;AF=0.313;AN=48;BaseQRankSum=0.529;DP=483;FS=24.535;HRun=0;HaplotypeScore=71.5244;InbreedingCoeff=0.1650;MQ=62.96;MQ0=18;MQRankSum=2.854;QD=1.47;ReadPosRankSum=1.625;VQSLOD=0.0545;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:0.89:0,1,2	./.	./.	0/0:36,0:15:0:0,0,0	0/1:16,0:16:0:0,0,0	0/1:20,0:20:0:0,0,0	1/1:19,1:20:8.85:78,9,0	0/0:24,0:21:6.01:0,6,60	0/0:14,0:15:9.01:0,9,91	0/1:21,0:21:19.76:20,0,108	0/0:21,0:21:3.01:0,3,41	1/1:7,0:8:2.84:14,3,0	0/1:16,0:12:26.04:26,0,33	1/1:9,4:13:10.49:126,10,0	0/0:9,0:9:1.65:0,2,5	0/0:10,0:10:8.38:0,8,54	0/1:29,3:33:68.29:68,0,574	0/1:11,2:13:41.98:42,0,173	0/0:14,0:13:6.02:0,6,70	./.	0/0:8,0:8:10.54:0,11,109	./.	1/1:13,0:13:3.01:32,3,0	0/1:21,0:25:17.11:17,0,136	0/0:20,0:20:6.02:0,6,82	0/0:14,0:14:3.44:0,3,20	0/0:11,0:15:6:0,6,52	0/0:7,0:5:1.25:0,1,3
chr10	101752999	.	G	GA	3043.89	PASS	AB=0.780;AC=18;AF=0.321;AN=56;BaseQRankSum=-3.817;DP=501;FS=8.865;HRun=7;HaplotypeScore=66.5420;InbreedingCoeff=0.8520;MQ=76.80;MQ0=4;MQRankSum=-0.850;QD=20.03;ReadPosRankSum=1.094;VQSLOD=2.6593;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:33.09:388,33,0	1/1:2,5:7:18.06:217,18,0	0/0:34,0:31:37.58:0,38,454	0/1:30,0:22:5.44:5,0,107	1/1:3,15:18:42.09:491,42,0	0/0:13,0:13:39.06:0,39,375	0/0:27,0:26:78.11:0,78,746	0/0:36,0:36:78.10:0,78,746	0/0:14,0:13:39.06:0,39,377	0/0:24,0:24:60.09:0,60,579	0/0:12,0:12:33.04:0,33,313	1/1:2,10:12:27.06:310,27,0	1/1:3,15:17:42.13:507,42,0	1/1:1,11:12:27.08:323,27,0	0/0:16,0:16:41.80:0,42,389	1/1:2,13:14:33.10:398,33,0	0/0:15,0:15:36.05:0,36,348	0/0:18,0:18:48.07:0,48,461	0/0:17,0:17:39.03:0,39,367	0/0:18,0:18:45.06:0,45,429	0/0:11,0:11:33.05:0,33,317	0/0:17,0:17:36.04:0,36,348	0/0:17,0:17:45.05:0,45,434	0/0:22,0:22:60.09:0,60,579	0/0:16,0:16:45.07:0,45,434	0/1:3,11:14:18.84:359,0,19	0/0:21,0:20:59.99:0,60,566	1/1:0,8:8:21.06:254,21,0
chr10	101754070	.	A	AT	1228.72	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-0.253;DP=622;FS=3.300;HRun=1;HaplotypeScore=64.1945;InbreedingCoeff=0.8418;MQ=79.76;MQ0=0;MQRankSum=-1.605;QD=28.57;ReadPosRankSum=2.020;VQSLOD=3.5570;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1278	1/1:0,13:13:39.13:585,39,0	0/1:12,0:12:3.22:3,0,318	0/0:18,0:18:48.15:0,48,623	0/0:28,0:28:84.26:0,84,1076	0/0:30,0:30:84.27:0,84,1089	0/0:26,0:26:78.21:0,78,968	0/0:33,0:33:87.27:0,87,1101	0/0:14,0:14:42.14:0,42,544	0/0:30,0:30:87.28:0,87,1129	0/0:16,0:16:48.16:0,48,622	0/0:17,0:17:51.17:0,51,661	0/0:26,0:26:78.24:0,78,999	0/0:18,0:18:54.18:0,54,700	0/0:25,0:25:72.23:0,72,933	1/1:0,18:18:51.17:765,51,0	0/0:20,0:20:54.18:0,54,701	0/0:14,0:14:42.14:0,42,545	0/0:19,0:19:57.18:0,57,738	0/0:24,0:24:69.21:0,69,879	0/0:15,0:15:42.14:0,42,543	0/0:24,0:24:72.23:0,72,935	0/0:34,0:34:99:0,102,1322	0/0:19,0:19:54.18:0,54,701	0/0:24,0:24:72.21:0,72,918	0/0:22,0:22:63.20:0,63,816	0/0:37,0:36:99:0,111,1412	0/0:13,0:13:36.12:0,36,467
chr10	101754305	.	GA	G	498.04	PASS	AB=0.935;AC=4;AF=0.071;AN=56;BaseQRankSum=6.621;DP=639;FS=1.319;HRun=10;HaplotypeScore=71.4390;InbreedingCoeff=0.4499;MQ=72.95;MQ0=5;MQRankSum=-0.969;QD=6.00;ReadPosRankSum=1.245;VQSLOD=1.3029;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,3:48:67.86:0,68,1159	0/0:4,0:4:12.03:0,12,133	0/1:39,1:28:26.10:26,0,314	0/0:33,0:18:32.80:0,33,307	0/0:28,0:28:69.14:0,69,742	0/0:21,1:22:34.11:0,34,605	0/0:19,0:19:48.13:0,48,530	0/0:23,1:24:34.10:0,34,596	0/0:14,0:14:39.08:0,39,420	0/0:21,0:21:57.15:0,57,630	0/0:23,0:23:60.16:0,60,658	0/0:20,1:21:24.80:0,25,491	0/0:17,0:17:51.09:0,51,529	0/0:16,0:16:45.11:0,45,491	0/0:7,0:22:30.42:0,30,268	0/0:21,0:21:60.16:0,60,664	0/0:26,0:26:75.20:0,75,828	1/1:1,25:26:65.97:573,66,0	0/0:17,0:17:41.78:0,42,441	0/0:24,0:24:67.04:0,67,716	0/1:15,2:17:13.02:13,0,317	0/0:22,0:22:28.16:0,28,530	0/0:18,1:19:25.08:0,25,505	0/0:18,0:18:48.13:0,48,525	0/0:33,0:33:87.22:0,87,952	0/0:18,0:18:50.49:0,50,528	0/0:35,3:38:12.05:0,12,800	0/0:8,0:7:24.06:0,24,262
chr10	101755056	.	TAC	T	1095.89	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.431;DP=515;FS=12.204;HRun=0;HaplotypeScore=95.9325;InbreedingCoeff=0.8562;MQ=55.58;MQ0=1;MQRankSum=-5.742;QD=29.62;ReadPosRankSum=0.758;VQSLOD=4.8150;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:14.99:0,15,139	0/0:8,0:8:15.03:0,15,190	0/0:16,1:4:11.83:0,12,129	0/0:17,0:6:11.06:0,11,128	0/0:28,0:28:40.50:0,41,382	0/0:19,0:19:51.14:0,51,899	0/0:7,0:7:21.05:0,21,328	0/0:46,0:46:99:0,129,2106	0/0:14,0:14:42.14:0,42,735	0/0:25,0:25:75.25:0,75,1372	0/0:22,0:22:64.70:0,65,974	0/0:25,0:25:36.99:0,37,324	0/0:18,0:18:29.97:0,30,208	0/0:20,0:20:25.49:0,25,224	0/0:18,0:18:54.17:0,54,982	0/0:15,0:15:12.60:0,13,211	0/0:24,0:24:63.21:0,63,1139	0/0:20,0:20:47.92:0,48,795	0/0:11,0:10:32.70:0,33,561	0/0:19,0:19:57.17:0,57,929	0/0:14,0:14:42.13:0,42,723	0/0:2,0:2:6.02:0,6,115	0/0:13,0:13:39.13:0,39,698	0/0:8,0:8:24.08:0,24,444	0/0:20,0:20:57.19:0,57,1041	1/1:1,30:29:87.14:1134,87,0	0/0:23,0:23:63.19:0,63,1128	1/1:4,2:6:8.95:75,9,0
chr10	101755066	.	CATACATATAT	C	3686.18	PASS	AB=0.516;AC=15;AF=0.278;AN=54;BaseQRankSum=10.075;DP=471;FS=8.419;HRun=0;HaplotypeScore=141.6606;InbreedingCoeff=0.7842;MQ=54.98;MQ0=0;MQRankSum=-11.322;QD=23.33;ReadPosRankSum=2.216;VQSLOD=1.9424;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:21:5.74:55,6,0	0/0:0,0:5:2.68:0,3,11	./.	0/0:12,0:6:5.99:0,6,101	1/1:4,26:30:20.98:423,21,0	0/0:18,0:18:45.13:0,45,2088	0/0:6,0:6:18.05:0,18,714	0/0:42,0:39:99:0,108,3914	0/0:13,0:13:36.12:0,36,1629	0/0:24,0:24:69.23:0,69,3290	0/0:15,0:15:42.11:0,42,1713	1/1:3,18:21:23.94:540,24,0	1/1:0,19:19:26.89:644,27,0	1/1:0,18:18:14.91:331,15,0	0/0:18,0:18:54.14:0,54,2298	0/1:1,1:16:48.23:146,0,48	0/0:23,0:23:63.20:0,63,2827	0/0:21,0:21:33.61:0,34,1292	0/0:13,0:13:27.15:0,27,1359	0/0:16,0:16:42.13:0,42,1700	0/0:15,0:15:45.06:0,45,1596	0/0:2,0:2:5.99:0,6,49	0/0:12,0:12:24.13:0,24,1297	0/0:7,0:7:21.05:0,21,558	0/0:17,0:17:48.15:0,48,2330	1/1:26,1:25:61.77:1449,62,0	0/0:20,0:21:54.14:0,54,2161	1/1:2,4:6:2.84:98,3,0
chr10	101755070	.	CAT	C	1090.20	PASS	AB=0.854;AC=22;AF=0.440;AN=50;BaseQRankSum=11.124;DP=448;FS=8.273;HRun=0;HaplotypeScore=89.6383;InbreedingCoeff=0.3421;MQ=55.29;MQ0=0;MQRankSum=-6.976;QD=4.58;ReadPosRankSum=2.975;VQSLOD=1.7755;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:13,0:6:2.65:0,3,11	1/1:26,0:26:8.52:42,9,0	0/0:15,0:15:39.13:0,39,628	0/1:6,1:7:18.60:19,0,221	0/0:36,2:36:75.25:0,75,1175	0/1:9,3:13:70.86:71,0,416	0/0:24,0:25:63.20:0,63,972	0/1:12,1:13:3.55:4,0,449	1/1:19,0:19:11.36:56,11,0	1/1:19,0:19:17.04:84,17,0	1/1:18,0:18:8.52:42,9,0	0/1:16,2:18:25.16:25,0,609	1/1:15,0:15:8.66:49,9,0	0/0:21,1:22:20.55:0,21,822	0/1:2,17:20:0.46:477,0,0	0/1:14,1:15:0.56:1,0,468	0/1:15,1:16:3.55:4,0,419	0/0:16,0:16:30.10:0,30,476	0/0:2,0:2:2.99:0,3,24	0/1:9,1:10:9.58:10,0,362	0/0:7,0:7:6.02:0,6,97	0/0:17,2:19:11.51:0,12,684	1/1:9,0:23:54.12:361,54,0	0/0:19,1:20:36.12:0,36,579	1/1:4,0:4:2.84:14,3,0
chr10	101755236	.	AACACACACAC	A	701.47	PASS	AB=0.824;AC=15;AF=0.300;AN=50;BaseQRankSum=5.680;DP=453;FS=1.629;HRun=0;HaplotypeScore=125.2906;InbreedingCoeff=0.5861;MQ=71.41;MQ0=8;MQRankSum=-4.188;QD=5.94;ReadPosRankSum=-0.759;VQSLOD=2.5406;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:5.87:42,6,0	1/1:2,0:3:3.01:30,3,0	./.	./.	1/1:12,0:15:3.01:68,3,0	0/0:24,0:24:24.08:0,24,898	0/0:16,0:16:6.91:0,7,242	0/0:20,0:19:7.16:0,7,33	0/0:7,0:7:3.01:0,3,117	0/0:17,0:17:15.10:0,15,466	0/0:10,0:10:12.02:0,12,339	1/1:7,3:10:9.03:246,9,0	1/1:9,2:12:6.02:158,6,0	1/1:13,0:14:3.01:70,3,0	0/0:15,0:15:15.05:0,15,584	0/1:11,1:14:77.91:103,0,78	0/0:27,0:27:49.67:0,50,1838	1/1:14,0:17:5.95:139,6,0	0/0:13,0:11:5.38:0,5,130	0/0:9,0:9:6.02:0,6,215	0/0:28,0:28:36.08:0,36,1112	0/0:13,0:13:12.04:0,12,346	./.	0/0:19,0:20:33.11:0,33,1365	0/0:11,0:11:15.05:0,15,612	0/0:13,0:13:13.12:0,13,243	0/0:14,0:14:12.04:0,12,378	0/0:5,0:7:6.02:0,6,147
chr10	101755684	.	G	GCTC	1238.67	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.393;DP=610;FS=4.124;HRun=0;HaplotypeScore=86.8290;InbreedingCoeff=0.9886;MQ=84.06;MQ0=1;MQRankSum=-0.330;QD=39.96;ReadPosRankSum=-1.437;VQSLOD=4.4554;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,131,1913	0/0:14,0:14:39.13:0,39,578	0/0:36,0:34:53.16:0,53,797	0/0:31,0:30:60.63:0,61,840	0/0:30,0:30:87.22:0,87,1223	0/0:26,0:26:60.19:0,60,870	0/0:15,0:15:39.13:0,39,578	0/0:30,0:30:60.18:0,60,837	0/0:20,0:20:54.18:0,54,801	0/0:26,0:26:54.18:0,54,784	0/0:27,0:27:75.21:0,75,1052	0/0:9,0:9:21.07:0,21,311	0/0:12,0:12:33.11:0,33,489	0/0:11,0:11:27.09:0,27,400	0/0:27,0:27:66.22:0,66,978	0/0:20,0:20:54.16:0,54,780	0/0:21,0:21:54.18:0,54,801	0/0:12,0:12:30.10:0,30,440	0/0:27,0:27:63.18:0,63,874	0/0:22,0:22:66.21:0,66,959	0/0:19,0:19:57.19:0,57,845	0/0:24,0:24:69.19:0,69,978	0/0:13,0:13:33.10:0,33,470	0/0:16,0:16:42.12:0,42,602	0/0:19,0:19:51.15:0,51,716	1/1:6,17:24:54.16:1045,54,0	0/0:20,0:20:57.18:0,57,823	1/1:0,7:7:15.05:313,15,0
chr10	101756664	.	GATGTATGT	G	4436.77	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=11.272;DP=825;FS=1.027;HRun=0;HaplotypeScore=223.5631;InbreedingCoeff=0.9367;MQ=68.40;MQ0=3;MQRankSum=-12.343;QD=26.57;ReadPosRankSum=-0.984;VQSLOD=3.9468;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,15:41:16.10:562,16,0	0/0:19,0:19:42.13:0,42,1622	0/0:31,0:27:6.11:0,6,95	./.	1/1:8,15:23:14.75:310,15,0	0/0:34,0:34:60.15:0,60,2072	0/0:28,0:28:48.14:0,48,1466	0/0:42,0:42:42.14:0,42,1245	0/0:39,0:39:90.26:0,90,3180	0/0:31,0:32:60.19:0,60,2107	0/0:31,0:31:54.15:0,54,1889	1/1:9,17:27:45.15:1044,45,0	1/1:16,28:44:63.22:1566,63,0	1/1:15,17:32:42.14:955,42,0	0/0:37,0:37:99:0,99,3599	0/0:34,0:34:84.29:0,84,3112	0/0:15,0:15:4.42:0,4,799	0/0:5,0:11:24.07:0,24,731	0/0:20,0:20:27.09:0,27,1113	0/0:33,0:33:63.22:0,63,2515	0/0:38,0:38:75.23:0,75,2742	0/0:29,0:30:69.17:0,69,2297	0/0:23,0:23:48.16:0,48,1836	0/0:24,0:24:48.16:0,48,1885	0/0:26,0:29:63.16:0,63,1975	0/0:30,0:28:48.11:0,48,602	0/0:37,0:37:75.24:0,75,2728	0/0:14,0:14:20.95:0,21,211
chr10	101756705	.	ACG	A	136.08	PASS	AB=0.833;AC=3;AF=0.054;AN=56;BaseQRankSum=6.360;DP=804;FS=10.086;HRun=0;HaplotypeScore=161.0759;InbreedingCoeff=0.1523;MQ=54.60;MQ0=12;MQRankSum=-4.518;QD=2.43;ReadPosRankSum=-1.974;VQSLOD=1.6776;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:13.37:0,13,320	0/0:20,0:20:54.15:0,54,936	0/0:27,0:16:48.16:0,48,871	0/0:22,0:8:18.06:0,18,296	0/0:27,0:27:3.80:0,4,539	0/0:29,0:29:75.26:0,75,1510	0/0:33,0:32:87.30:0,87,1692	0/0:44,0:43:99:0,126,2409	0/0:42,0:42:99:0,123,2356	0/0:28,0:28:78.20:0,78,1517	0/0:27,0:27:81.27:0,81,1576	0/0:29,0:29:31.25:0,31,662	0/0:41,0:41:72.03:0,72,840	0/1:27,0:27:13.02:13,0,499	0/0:38,0:38:99:0,114,2284	0/0:32,0:32:87.28:0,87,1591	0/0:14,0:13:32.95:0,33,665	0/0:13,0:13:13.08:0,13,439	0/0:24,0:24:69.19:0,69,1315	0/0:37,0:37:99:0,108,2154	0/0:35,0:35:99:0,105,2076	0/0:39,0:39:99:0,117,2258	0/0:25,0:25:75.26:0,75,1513	0/0:27,0:27:78.27:0,78,1556	0/0:30,0:30:87.22:0,87,1586	0/1:12,12:22:24.38:200,0,24	0/0:33,0:33:99:0,99,1966	0/1:4,1:4:1.95:20,0,2
chr10	101756708	.	TAC	T	158.38	PASS	AB=0.676;AC=3;AF=0.054;AN=56;BaseQRankSum=5.137;DP=796;FS=5.151;HRun=0;HaplotypeScore=162.3599;InbreedingCoeff=0.4928;MQ=54.59;MQ0=11;MQRankSum=-4.275;QD=5.28;ReadPosRankSum=-0.090;VQSLOD=2.8997;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:32:41.01:0,41,473	0/0:20,0:20:56.86:0,57,988	0/0:29,0:17:51.17:0,51,905	0/0:20,0:8:18.06:0,18,324	0/0:27,0:27:41.54:0,42,649	0/0:29,0:29:75.26:0,75,1510	0/0:32,0:31:84.29:0,84,1660	0/0:40,0:39:99:0,117,2297	0/0:44,0:44:99:0,129,2400	0/0:29,0:29:84.19:0,84,1587	0/0:25,0:25:75.26:0,75,1495	0/0:30,0:30:71.90:0,72,911	0/0:41,0:41:99:0,99,1133	0/0:26,0:26:54.73:0,55,679	0/0:37,0:37:99:0,111,2209	0/0:31,0:31:84.29:0,84,1568	0/0:13,0:12:32.95:0,33,665	0/0:12,0:12:30.06:0,30,583	0/0:23,0:23:69.02:0,69,1325	0/0:37,0:37:99:0,108,2161	0/0:34,0:34:99:0,102,2051	0/0:42,0:42:99:0,126,2373	0/0:26,0:26:78.27:0,78,1558	0/0:28,0:28:81.28:0,81,1599	0/0:27,0:27:78.19:0,78,1454	0/1:13,12:23:6.40:220,0,6	0/0:32,0:32:96.33:0,96,1902	1/1:4,1:4:0.31:27,0,0
chr10	101756714	.	T	TG	435.36	PASS	AB=0.625;AC=3;AF=0.054;AN=56;BaseQRankSum=5.272;DP=796;FS=9.061;HRun=0;HaplotypeScore=145.5136;InbreedingCoeff=0.4684;MQ=53.87;MQ0=16;MQRankSum=-5.620;QD=15.01;ReadPosRankSum=-3.292;VQSLOD=4.2670;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,2:33:68.68:0,69,768	0/0:20,0:20:54.18:0,54,749	0/0:33,0:17:51.16:0,51,673	0/0:24,0:8:21.04:0,21,242	0/0:24,0:24:45.01:0,45,603	0/0:26,0:25:63.20:0,63,861	0/0:31,1:31:87.25:0,87,1183	0/0:37,0:36:99:0,105,1452	0/0:42,0:42:99:0,123,1701	0/0:28,0:28:78.26:0,78,1091	0/0:25,0:25:75.24:0,75,1034	0/0:29,0:29:72.17:0,72,977	0/0:40,0:40:99:0,103,1396	0/0:30,0:30:66.70:0,67,895	0/0:38,0:38:99:0,114,1561	0/0:32,0:32:84.21:0,84,1157	0/0:14,0:13:20.70:0,21,407	0/0:12,0:12:30.09:0,30,375	0/0:27,0:27:81.24:0,81,1112	0/0:38,0:38:99:0,108,1493	0/0:35,0:35:99:0,102,1426	0/0:39,0:39:99:0,117,1636	0/0:26,0:26:78.24:0,78,1058	0/0:28,0:28:84.18:0,84,1112	0/0:26,0:26:75.21:0,75,1024	1/1:13,11:22:2.87:449,3,0	0/0:29,0:29:87.29:0,87,1217	0/1:2,3:5:26.61:78,0,27
chr10	101756723	.	AATGT	A	557.39	PASS	AB=0.983;AC=12;AF=0.231;AN=52;BaseQRankSum=6.853;DP=793;FS=6.024;HRun=0;HaplotypeScore=182.2187;InbreedingCoeff=0.4329;MQ=54.56;MQ0=10;MQRankSum=-1.362;QD=2.69;ReadPosRankSum=0.371;VQSLOD=2.1778;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:36:39.58:0,40,825	1/1:14,6:20:21.07:303,21,0	./.	./.	0/1:28,1:28:4.68:5,0,747	0/0:16,0:25:33.08:0,33,531	0/0:29,0:31:27.98:0,28,448	0/0:38,0:37:17.85:0,18,156	0/0:45,1:46:21.79:0,22,1305	0/1:26,1:27:4.47:4,0,815	0/0:30,0:30:45.15:0,45,971	0/1:30,1:31:1.44:1,0,921	0/0:41,0:41:48.16:0,48,1096	0/0:28,0:28:45.15:0,45,1025	0/0:37,0:37:36.12:0,36,847	1/1:19,12:31:17.99:280,18,0	0/0:12,0:18:15.05:0,15,230	1/1:13,1:14:5.67:88,6,0	0/1:26,0:26:12.31:12,0,640	0/0:36,1:37:22.65:0,23,1406	0/0:33,0:33:48.15:0,48,1058	0/0:38,0:38:78.24:0,78,1702	0/0:25,0:25:39.13:0,39,918	0/0:25,0:25:42.13:0,42,892	0/0:25,0:25:42.14:0,42,949	0/1:24,0:22:5.61:6,0,39	0/0:28,0:27:45.09:0,45,922	0/1:5,0:5:1.26:1,0,15
chr10	101756725	.	TG	T	398.30	PASS	AB=0.646;AC=2;AF=0.036;AN=56;BaseQRankSum=6.343;DP=798;FS=12.282;HRun=1;HaplotypeScore=140.9555;InbreedingCoeff=-0.0283;MQ=54.65;MQ0=10;MQRankSum=-4.497;QD=13.73;ReadPosRankSum=-0.163;VQSLOD=1.8045;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:38.71:0,39,618	0/0:20,0:20:47.81:0,48,570	0/0:25,0:16:48.16:0,48,737	0/0:17,0:8:20.98:0,21,265	0/0:30,0:29:46.58:0,47,714	0/0:27,0:25:60.18:0,60,830	0/0:31,0:30:84.26:0,84,1176	0/0:37,0:36:99:0,105,1586	0/0:46,0:46:99:0,134,2037	0/0:29,0:29:83.08:0,83,1237	0/0:31,0:31:93.28:0,93,1412	0/0:32,0:32:46.96:0,47,701	0/0:40,0:40:54.18:0,54,856	0/0:29,0:29:48.15:0,48,740	0/0:36,0:36:99:0,108,1683	0/0:29,0:29:62.08:0,62,810	0/0:18,0:18:38.15:0,38,524	0/0:14,0:14:28.79:0,29,340	0/0:26,0:26:76.13:0,76,1145	0/0:38,0:38:99:0,113,1730	0/0:33,0:33:99:0,99,1525	0/0:40,0:40:99:0,120,1889	0/0:25,0:25:75.26:0,75,1178	0/0:26,0:26:72.25:0,72,1131	0/0:26,0:26:78.24:0,78,1201	0/1:12,12:22:99:414,0,239	0/0:29,0:28:81.26:0,81,1249	0/1:2,3:5:20.50:73,0,20
chr10	101757252	.	C	CAG	220.53	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=4.043;DP=571;FS=0.000;HRun=0;HaplotypeScore=98.8944;InbreedingCoeff=0.4350;MQ=72.55;MQ0=7;MQRankSum=-1.850;QD=1.00;ReadPosRankSum=-2.535;VQSLOD=1.1064;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:0.47:1,0,0	0/1:8,0:8:0:0,0,0	0/0:40,0:25:3.01:0,3,33	0/1:38,0:22:1.26:3,0,1	0/1:11,0:11:0.05:0,0,0	0/0:25,0:25:35.09:0,35,309	0/0:25,0:25:28.10:0,28,236	0/0:24,0:24:0.31:0,0,103	0/0:15,0:18:24.96:0,25,218	1/1:21,0:21:16.06:81,16,0	1/1:15,0:15:3.36:10,3,0	0/0:25,0:25:10.21:0,10,44	0/0:19,0:19:2.80:0,3,13	0/0:21,0:21:6.84:0,7,29	1/1:11,14:25:12.79:155,13,0	0/1:22,0:22:0.83:45,0,1	0/1:15,0:15:10.46:10,0,200	1/1:11,0:11:1.84:18,2,0	0/0:13,0:13:7.83:0,8,72	0/0:26,0:26:1.26:0,1,175	0/0:16,0:15:8.12:0,8,135	0/0:17,0:18:14.64:0,15,130	0/0:14,0:14:20.99:0,21,218	0/0:20,0:20:31.43:0,31,308	0/0:29,0:29:46.66:0,47,474	0/1:29,0:29:4.62:37,0,5	0/0:17,0:17:16.03:0,16,226	0/1:5,0:5:0:0,0,0
chr10	101757432	.	GGATA	G	1355.90	PASS	AB=0.923;AC=9;AF=0.173;AN=52;BaseQRankSum=3.516;DP=517;FS=2.403;HRun=0;HaplotypeScore=105.6453;InbreedingCoeff=0.7301;MQ=53.07;MQ0=11;MQRankSum=0.950;QD=12.91;ReadPosRankSum=0.907;VQSLOD=3.1620;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:15.04:0,15,175	0/0:4,0:4:6.02:0,6,69	./.	./.	0/0:18,0:18:17.97:0,18,182	0/0:16,0:16:12.04:0,12,275	0/0:22,0:22:17.75:0,18,311	0/0:31,0:24:2.92:0,3,17	0/0:18,0:18:27.09:0,27,549	1/1:14,19:33:57.18:821,57,0	1/1:7,6:13:12.04:184,12,0	0/0:13,0:13:18.01:0,18,200	0/0:21,0:20:18.05:0,18,231	0/0:11,0:11:12.04:0,12,168	0/0:24,0:24:36.12:0,36,805	0/0:19,0:19:20.84:0,21,243	0/0:14,0:14:29.59:0,30,597	0/0:12,0:13:21.07:0,21,339	0/0:26,0:20:18.06:0,18,374	0/0:19,0:19:27.09:0,27,578	0/0:7,0:7:12.04:0,12,275	0/1:22,2:24:15.95:16,0,539	0/0:17,0:17:21.07:0,21,441	0/0:17,0:17:27.09:0,27,582	0/0:14,0:21:14.99:0,15,268	1/1:28,0:28:30.06:409,30,0	0/0:20,0:20:39.13:0,39,832	1/1:7,0:7:6.02:78,6,0
chr10	101757433	.	GAT	G	36.83	PASS	AB=0.875;AC=2;AF=0.036;AN=56;BaseQRankSum=7.675;DP=513;FS=5.647;HRun=0;HaplotypeScore=91.7019;InbreedingCoeff=-0.0402;MQ=53.14;MQ0=11;MQRankSum=-1.004;QD=1.08;ReadPosRankSum=1.309;VQSLOD=1.2472;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:42.12:0,42,679	0/0:4,0:4:12.04:0,12,203	0/0:20,0:6:17.99:0,18,201	0/0:18,0:6:12.04:0,12,176	0/0:18,0:18:41.86:0,42,628	0/0:16,0:16:42.14:0,42,670	0/0:22,0:22:53.95:0,54,841	0/0:31,0:24:61.41:0,61,852	0/0:18,0:18:51.17:0,51,853	0/0:33,0:33:27.75:0,28,504	0/0:13,0:13:14.23:0,14,256	0/0:14,0:14:36.12:0,36,602	0/0:21,0:20:54.18:0,54,873	0/0:11,0:11:27.06:0,27,405	0/0:23,0:23:66.22:0,66,1132	0/0:19,0:19:42.02:0,42,690	0/0:14,0:14:36.12:0,36,642	0/0:13,0:13:36.12:0,36,530	0/0:25,0:19:57.14:0,57,857	0/0:19,0:19:57.19:0,57,957	0/0:7,0:7:21.07:0,21,364	0/0:24,0:24:65.22:0,65,1070	0/0:16,0:16:48.16:0,48,799	0/0:17,0:17:44.23:0,44,770	0/0:21,0:21:48.10:0,48,720	0/1:18,9:27:99:107,0,306	0/0:20,0:20:57.18:0,57,993	0/1:7,0:7:17.05:17,0,66
chr10	101757477	.	GAT	G	129.77	PASS	AB=0.926;AC=4;AF=0.071;AN=56;BaseQRankSum=8.289;DP=468;FS=8.154;HRun=0;HaplotypeScore=87.9915;InbreedingCoeff=-0.0786;MQ=56.17;MQ0=11;MQRankSum=-0.702;QD=1.71;ReadPosRankSum=2.300;VQSLOD=0.9764;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:17:1.22:1,0,48	0/0:3,1:4:0.82:0,1,12	0/0:14,0:10:24.96:0,25,334	0/0:11,0:7:21.06:0,21,276	0/0:15,0:14:7.80:0,8,113	0/0:13,0:13:36.12:0,36,573	0/0:16,0:16:35.86:0,36,610	0/0:30,0:26:75.20:0,75,1041	0/0:23,0:23:66.22:0,66,1079	0/0:30,0:30:14.98:0,15,450	0/0:13,0:13:11.26:0,11,246	0/1:15,0:14:39.21:39,0,51	0/0:11,0:10:11.74:0,12,133	0/0:12,0:10:6.01:0,6,21	0/0:22,0:22:63.20:0,63,1062	0/1:11,8:19:62.65:63,0,116	0/0:19,0:18:42.14:0,42,739	0/0:10,0:10:30.10:0,30,450	0/0:23,0:21:63.20:0,63,974	0/0:19,0:19:54.18:0,54,922	0/0:10,0:10:27.09:0,27,457	0/0:16,0:16:37.31:0,37,689	0/0:14,0:14:39.13:0,39,677	0/0:18,0:18:41.20:0,41,736	0/0:22,0:22:45.07:0,45,639	0/1:24,0:24:99:127,0,193	0/0:20,0:20:57.19:0,57,999	0/0:7,0:7:3.96:0,4,88
chr10	101757479	.	T	TAG	1564.28	PASS	AB=0.771;AC=12;AF=0.214;AN=56;BaseQRankSum=7.427;DP=475;FS=2.849;HRun=0;HaplotypeScore=83.6934;InbreedingCoeff=0.6172;MQ=57.49;MQ0=10;MQRankSum=-2.030;QD=14.35;ReadPosRankSum=2.063;VQSLOD=3.5109;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:21:15.05:265,15,0	1/1:1,3:4:6.02:106,6,0	0/0:14,0:10:24.96:0,25,334	0/0:12,0:8:21.03:0,21,264	0/1:13,2:14:2.72:147,0,3	0/0:13,0:13:36.11:0,36,496	0/0:14,0:14:33.11:0,33,472	0/0:30,0:27:72.23:0,72,1006	0/0:23,0:23:66.22:0,66,944	0/0:30,0:30:85.28:0,85,903	0/0:12,0:12:30.02:0,30,350	1/1:0,14:15:21.07:357,21,0	0/1:1,10:10:2.87:298,0,3	1/1:11,1:10:12.02:160,12,0	0/0:22,0:22:60.20:0,60,859	0/1:10,9:19:15.88:376,0,16	0/0:21,0:20:42.14:0,42,587	0/1:10,0:10:22.08:22,0,117	0/0:23,0:21:63.20:0,63,865	0/0:20,0:19:54.17:0,54,755	0/0:10,0:10:27.07:0,27,364	0/0:16,0:16:42.12:0,42,580	0/0:15,0:15:45.12:0,45,607	0/0:18,0:18:37.56:0,38,556	0/0:21,0:21:10.87:0,11,377	0/0:24,0:24:68.22:0,68,498	0/0:20,0:20:54.16:0,54,752	0/0:8,0:8:11.82:0,12,100
chr10	101757483	.	T	TAGAGAG	1806.54	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=4.812;DP=471;FS=1.187;HRun=0;HaplotypeScore=115.8545;InbreedingCoeff=0.6511;MQ=58.72;MQ0=6;MQRankSum=-3.269;QD=14.11;ReadPosRankSum=-1.192;VQSLOD=2.9992;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:22:20.99:211,21,0	1/1:5,0:5:5.89:74,6,0	0/0:16,0:12:30.98:0,31,614	0/0:13,0:8:20.95:0,21,380	1/1:2,12:13:12.04:326,12,0	0/0:13,0:13:33.11:0,33,740	0/0:13,0:13:36.11:0,36,762	0/0:29,0:28:81.25:0,81,1626	0/0:23,0:23:66.23:0,66,1499	0/0:30,0:30:88.05:0,88,1691	0/0:12,0:12:30.10:0,30,610	1/1:18,0:17:26.99:292,27,0	1/1:10,0:9:18.03:230,18,0	1/1:2,11:11:12.04:425,12,0	0/0:21,0:21:60.21:0,60,1325	0/1:17,0:17:46.70:305,0,47	0/0:21,0:20:40.38:0,40,896	0/0:10,0:10:5.35:0,5,199	0/0:23,0:23:66.21:0,66,1382	0/0:20,0:19:51.18:0,51,1152	0/0:10,0:10:27.08:0,27,532	0/0:16,0:16:42.14:0,42,930	0/0:15,0:15:45.15:0,45,1004	0/0:16,0:16:1.67:0,2,850	0/1:22,0:22:99:119,0,512	0/0:24,0:24:40.29:0,40,535	0/0:18,0:18:51.18:0,51,1191	0/1:6,0:6:8.13:8,0,67
chr10	101757518	.	GGAAAGGAAAA	G	969.60	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.886;DP=455;FS=2.503;HRun=0;HaplotypeScore=129.4490;InbreedingCoeff=0.8354;MQ=68.97;MQ0=5;MQRankSum=-5.153;QD=51.03;ReadPosRankSum=1.777;VQSLOD=3.6435;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:27.09:0,27,1355	1/1:3,1:4:6.02:182,6,0	0/0:32,0:19:44.93:0,45,1314	0/0:34,0:17:22.65:0,23,605	0/0:18,0:17:24.08:0,24,1079	0/0:12,0:12:36.12:0,36,1751	0/0:11,0:11:27.09:0,27,1299	0/0:28,0:27:57.16:0,57,2117	0/0:22,0:22:60.21:0,60,2653	0/0:18,0:18:36.10:0,36,1335	0/0:16,0:16:39.07:0,39,1860	0/0:13,0:12:12.04:0,12,620	0/0:9,0:9:21.07:0,21,974	0/0:11,0:9:9.03:0,9,370	0/0:13,0:13:36.12:0,36,1800	1/1:5,10:15:10.11:892,10,0	0/0:20,0:20:45.10:0,45,2078	0/0:5,0:5:9.03:0,9,398	0/0:15,0:15:33.11:0,33,1598	0/0:16,0:16:42.14:0,42,1979	0/0:9,0:9:21.07:0,21,1014	0/0:14,0:14:33.11:0,33,1608	0/0:15,0:15:33.11:0,33,1602	0/0:17,0:17:42.08:0,42,1723	0/0:20,0:19:51.18:0,51,2386	0/0:23,0:23:57.12:0,57,2385	0/0:14,0:14:33.10:0,33,1543	0/0:6,0:6:18.06:0,18,871
chr10	101757555	.	AAG	A	107.19	PASS	AB=0.943;AC=11;AF=0.212;AN=52;BaseQRankSum=1.218;DP=507;FS=1.070;HRun=0;HaplotypeScore=82.7809;InbreedingCoeff=-0.0137;MQ=50.40;MQ0=21;MQRankSum=0.640;QD=0.53;ReadPosRankSum=1.941;VQSLOD=1.4551;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:13.63:0,14,90	0/0:7,0:7:3.37:0,3,17	./.	0/1:49,0:6:0:0,0,0	0/0:22,0:22:14.58:0,15,122	0/1:16,1:17:18.22:18,0,123	0/0:11,0:11:6.02:0,6,90	0/0:31,0:26:9.03:0,9,108	0/0:16,0:17:17.95:0,18,123	0/1:9,1:10:20.92:21,0,120	0/1:19,1:20:17.90:18,0,165	0/0:10,0:12:12.02:0,12,130	0/0:13,0:14:15.04:0,15,185	0/0:9,0:10:14.68:0,15,124	0/1:18,1:19:2.85:3,0,371	1/1:12,0:15:10.65:54,11,0	0/1:18,4:21:99:99,0,180	./.	0/0:17,0:18:18.12:0,18,159	0/0:18,0:19:9.90:0,10,111	0/0:9,0:9:3.87:0,4,25	0/0:17,0:16:10.28:0,10,130	0/1:16,0:17:1.47:1,0,175	0/1:13,1:14:11.88:12,0,239	0/1:18,1:17:9:9,0,236	0/0:9,0:16:25.19:0,25,211	0/0:8,0:15:9.01:0,9,97	0/0:10,0:9:2.55:0,3,37
chr10	101757812	.	C	CCACA	448.55	PASS	AB=0.989;AC=15;AF=0.313;AN=48;BaseQRankSum=-1.324;DP=509;FS=2.314;HRun=0;HaplotypeScore=111.6410;InbreedingCoeff=0.3701;MQ=69.37;MQ0=14;MQRankSum=0.910;QD=2.49;ReadPosRankSum=-1.993;VQSLOD=2.1309;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:5.59:0,6,33	0/0:4,0:4:3:0,3,25	./.	./.	0/1:14,0:14:0:0,0,0	0/0:13,0:13:8.81:0,9,110	0/1:15,0:15:21.89:24,0,22	0/1:24,0:24:39.81:58,0,40	0/0:11,0:13:15.01:0,15,192	0/0:12,0:13:12.73:0,13,143	0/0:10,0:11:8.98:0,9,94	0/0:17,0:18:24.22:0,24,171	0/0:16,0:16:20.45:0,20,180	0/0:21,0:21:6.19:0,6,31	0/1:17,0:16:21.44:21,0,84	0/0:6,0:6:12.01:0,12,111	0/0:30,0:34:35.69:0,36,431	1/1:11,0:11:6.02:91,6,0	1/1:8,0:8:6.02:80,6,0	./.	1/1:21,7:31:9.03:211,9,0	0/0:13,0:13:3.01:0,3,46	0/0:5,0:5:9:0,9,113	0/0:27,0:34:30.05:0,30,354	0/1:17,0:18:3.48:3,0,39	1/1:20,0:20:2.80:13,3,0	1/1:11,5:17:8.50:93,8,0	./.
chr10	101757849	.	CACACACAA	C	1345.92	PASS	AB=0.983;AC=9;AF=0.161;AN=56;BaseQRankSum=4.721;DP=616;FS=13.249;HRun=0;HaplotypeScore=166.1869;InbreedingCoeff=0.3599;MQ=55.32;MQ0=20;MQRankSum=-0.866;QD=9.75;ReadPosRankSum=1.119;VQSLOD=2.0478;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:37:49.01:368,0,49	0/1:4,0:4:4.49:14,0,4	0/0:34,0:17:27.41:0,27,323	0/0:43,0:17:32.62:0,33,360	0/0:16,0:16:3.01:0,3,41	0/0:21,0:21:57.03:0,57,1004	0/0:27,0:27:73.42:0,73,951	0/0:24,0:24:71.07:0,71,785	0/0:24,0:24:63:0,63,1168	0/0:16,0:15:44.98:0,45,803	0/0:11,0:11:27:0,27,446	0/1:19,1:20:8.49:407,0,8	1/1:18,2:21:25.02:385,25,0	1/1:21,2:23:5.95:76,6,0	0/0:18,0:17:48.09:0,48,1024	0/0:13,0:13:14.54:0,15,205	0/0:43,0:43:99:0,120,2426	0/0:11,0:10:22.80:0,23,404	0/0:17,0:16:45.04:0,45,592	0/0:9,0:9:21.76:0,22,268	0/0:50,0:47:87.27:0,87,1562	0/0:7,0:7:14.94:0,15,246	0/0:14,0:14:38.80:0,39,612	0/0:39,0:37:90.15:0,90,1952	0/0:23,0:23:56.76:0,57,871	0/1:28,0:28:99:195,0,375	0/0:18,0:17:30.47:0,30,527	0/1:4,0:4:9.63:47,0,10
chr10	101757851	.	CACACAA	C	2445.63	PASS	AB=0.833;AC=15;AF=0.268;AN=56;BaseQRankSum=3.248;DP=614;FS=9.473;HRun=0;HaplotypeScore=145.9670;InbreedingCoeff=0.7506;MQ=55.41;MQ0=20;MQRankSum=0.570;QD=15.19;ReadPosRankSum=1.202;VQSLOD=2.4476;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,3:33:80.34:848,80,0	1/1:4,0:4:5.55:36,6,0	0/0:35,0:17:27.32:0,27,286	0/0:40,0:16:29.60:0,30,286	0/1:0,15:15:0.04:0,0,1	0/0:19,0:19:51.04:0,51,786	0/0:27,0:27:73.36:0,73,770	0/0:27,0:27:79.40:0,79,766	0/0:24,0:24:63:0,63,995	0/0:15,0:15:31.24:0,31,567	0/0:11,0:11:26.99:0,27,340	1/1:14,5:20:17.08:683,17,0	1/1:3,18:21:25.85:556,26,0	1/1:3,19:22:5.69:87,6,0	0/0:19,0:18:51.07:0,51,835	0/1:13,0:13:5.23:5,0,65	0/0:41,0:41:99:0,114,1849	0/0:11,0:10:21.84:0,22,301	0/0:17,0:16:45.03:0,45,498	0/0:11,0:11:27.76:0,28,296	0/0:51,0:48:87.16:0,87,1232	0/0:6,0:7:14.94:0,15,195	0/0:15,0:15:41.80:0,42,543	0/0:41,0:39:92.88:0,93,1526	0/0:23,0:23:56.75:0,57,682	0/1:27,0:27:44.10:309,0,44	0/0:18,0:17:30.45:0,30,441	1/1:5,0:5:14.82:99,15,0
chr10	101757855	.	CAA	C	1504.77	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=6.511;DP=606;FS=0.000;HRun=2;HaplotypeScore=113.9983;InbreedingCoeff=0.9080;MQ=56.56;MQ0=18;MQRankSum=2.124;QD=9.90;ReadPosRankSum=2.697;VQSLOD=0.6077;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,1:31:72.68:477,73,0	1/1:3,0:3:5.94:49,6,0	0/0:35,0:17:27.33:0,27,286	0/0:43,0:19:32.59:0,33,316	0/1:15,0:15:0.04:0,0,1	0/0:20,0:20:56.84:0,57,536	0/0:25,0:25:51.85:0,52,511	0/0:29,0:29:86.84:0,87,802	0/0:22,0:22:53.80:0,54,599	0/0:17,0:16:36.03:0,36,423	0/0:16,0:16:25.97:0,26,305	1/1:21,0:21:32.96:283,33,0	1/1:21,0:21:24.99:199,25,0	1/1:21,0:21:1.94:13,2,0	0/0:17,0:17:50.65:0,51,490	1/1:1,12:13:11.83:165,12,0	0/0:35,0:35:87.62:0,88,1011	0/0:7,0:7:17.32:0,17,144	0/0:17,0:16:41.94:0,42,376	0/0:14,0:14:37.03:0,37,278	0/0:43,0:41:81.03:0,81,652	0/0:12,0:12:20.92:0,21,200	0/0:20,0:20:56.71:0,57,524	0/0:38,0:36:56.92:0,57,751	0/0:25,0:25:65.18:0,65,513	1/1:22,0:22:58.33:413,58,0	0/0:16,0:15:30.45:0,30,296	1/1:5,0:5:14.82:99,15,0
chr10	101757892	.	GAC	G	1084.87	PASS	AB=0.547;AC=3;AF=0.054;AN=56;BaseQRankSum=6.614;DP=656;FS=26.418;HRun=0;HaplotypeScore=125.4584;InbreedingCoeff=0.6088;MQ=70.00;MQ0=5;MQRankSum=-0.840;QD=27.82;ReadPosRankSum=1.800;VQSLOD=2.7123;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:57.18:0,57,939	0/0:5,0:5:9.02:0,9,129	0/0:47,0:28:24.78:0,25,634	0/0:39,0:24:49.93:0,50,559	0/0:20,0:20:26.88:0,27,467	0/0:29,0:29:78.25:0,78,1323	0/0:26,0:26:63.17:0,63,1033	0/0:36,0:36:99:0,99,1630	0/0:23,0:23:63.22:0,63,1091	0/0:16,0:16:45.15:0,45,756	0/0:28,0:28:66.23:0,66,1132	0/0:18,0:18:45.07:0,45,744	0/0:25,0:25:30.08:0,30,514	0/0:30,0:30:41.82:0,42,692	0/0:22,0:22:63.20:0,63,1059	0/0:18,0:18:24.05:0,24,361	0/0:30,0:30:78.25:0,78,1321	0/0:6,0:6:15.05:0,15,258	0/0:12,0:12:33.11:0,33,549	0/0:14,0:14:36.11:0,36,596	0/0:28,0:27:54.17:0,54,908	0/0:14,0:14:30.10:0,30,519	0/0:25,0:25:51.17:0,51,883	0/0:30,0:29:78.27:0,78,1350	0/0:26,0:26:63.18:0,63,1011	0/1:5,24:29:59.49:910,0,59	0/0:18,0:18:48.16:0,48,825	1/1:2,8:10:21.07:280,21,0
chr10	101758305	.	C	CTT	1047.25	PASS	AB=0.862;AC=14;AF=0.250;AN=56;BaseQRankSum=4.661;DP=408;FS=8.897;HRun=0;HaplotypeScore=98.3555;InbreedingCoeff=-0.3603;MQ=33.78;MQ0=37;MQRankSum=-3.030;QD=4.51;ReadPosRankSum=1.624;VQSLOD=2.1058;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:11:11.50:0,12,130	0/0:7,0:6:10.10:0,10,86	0/0:9,0:4:12:0,12,136	0/0:13,0:3:6.02:0,6,98	0/0:13,2:14:0.32:0,0,0	0/1:17,1:17:6.82:7,0,418	0/1:22,5:21:99:108,0,382	0/0:15,0:9:15.51:0,16,203	0/0:17,0:15:23.45:0,23,322	0/1:20,3:18:99:140,0,296	0/0:8,0:6:5.81:0,6,62	0/0:7,2:11:2.31:0,2,114	0/1:3,1:3:46.39:46,0,55	0/1:8,2:8:23.41:83,0,23	0/0:12,1:12:0.29:0,0,198	0/1:13,2:14:44.28:44,0,237	0/1:18,3:18:99:110,0,331	0/1:7,1:7:32.67:33,0,115	0/1:16,2:10:84.48:84,0,206	0/0:11,0:10:14.59:0,15,213	0/0:23,0:19:29.22:0,29,484	0/1:20,3:21:67.53:68,0,339	0/1:18,3:20:8.83:9,0,195	0/1:17,1:16:25.19:25,0,201	0/0:13,0:9:8.43:0,8,89	0/1:12,6:16:57.17:383,0,57	0/0:5,0:5:8.81:0,9,88	0/1:2,1:3:23.29:52,0,23
chr10	101758315	.	TC	T	97.59	PASS	AB=0.933;AC=11;AF=0.196;AN=56;BaseQRankSum=6.118;DP=450;FS=1.271;HRun=3;HaplotypeScore=98.3577;InbreedingCoeff=-0.1466;MQ=34.35;MQ0=48;MQRankSum=-2.368;QD=0.66;ReadPosRankSum=0.716;VQSLOD=-0.7292;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,2:15:18.04:0,18,250	0/0:5,0:4:9.02:0,9,111	0/0:9,0:4:11.50:0,12,110	0/0:17,0:3:6.02:0,6,86	1/1:15,0:14:2.50:20,3,0	0/1:17,2:17:34.41:34,0,364	0/0:26,0:19:3.92:0,4,308	0/0:16,1:12:24.04:0,24,312	0/1:17,2:17:20.18:20,0,271	0/0:24,0:21:54.45:0,54,545	0/0:14,0:10:2.90:0,3,43	0/1:10,0:11:20.46:20,0,51	0/1:6,0:5:19.52:20,0,59	0/1:11,1:8:21.68:22,0,50	0/1:14,0:12:51.78:52,0,191	0/1:18,0:13:16.32:16,0,163	0/1:21,4:21:19:19,0,372	0/1:5,1:6:16:16,0,81	0/0:18,0:11:19.48:0,19,251	0/0:17,0:14:25.58:0,26,324	0/0:25,1:20:39.09:0,39,520	0/0:26,0:24:43.17:0,43,560	0/0:21,0:20:21.56:0,22,261	0/0:15,4:14:11.56:0,12,180	0/0:12,0:7:2.12:0,2,42	0/0:21,0:19:43.40:0,43,404	0/0:5,0:5:9.49:0,9,107	0/0:3,0:3:8.98:0,9,82
chr10	101758329	.	CCT	C	357.58	PASS	AB=0.908;AC=11;AF=0.196;AN=56;BaseQRankSum=3.623;DP=445;FS=15.230;HRun=0;HaplotypeScore=105.8163;InbreedingCoeff=0.3075;MQ=35.63;MQ0=41;MQRankSum=-3.214;QD=3.84;ReadPosRankSum=-2.181;VQSLOD=1.3192;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,1:13:24.62:25,0,256	1/1:1,3:4:2.97:20,3,0	0/1:9,0:3:0:0,0,0	0/0:16,0:2:3.01:0,3,53	0/1:8,1:8:26.54:27,0,47	0/0:18,0:16:19.50:0,20,511	0/0:25,0:18:27.29:0,27,373	0/0:18,0:13:20.28:0,20,292	0/0:19,0:18:27.90:0,28,511	0/0:18,0:16:44.86:0,45,585	0/0:18,0:15:3.01:0,3,55	0/1:10,1:11:47.26:47,0,53	1/1:8,2:9:3.56:82,4,0	1/1:14,1:12:5.81:101,6,0	0/0:14,0:13:16.28:0,16,435	0/1:13,5:14:10.38:192,0,10	0/0:25,0:20:41.71:0,42,706	0/0:6,0:6:14.89:0,15,159	0/0:13,0:8:18.84:0,19,266	0/0:18,0:15:18.03:0,18,522	0/0:27,0:20:42.13:0,42,726	0/0:29,0:26:49.98:0,50,798	0/0:17,0:15:18.17:0,18,270	0/0:19,0:13:20.99:0,21,342	0/0:17,0:11:21.01:0,21,298	0/0:29,0:25:61.21:0,61,495	0/0:4,0:3:6.02:0,6,99	0/0:2,0:2:5.91:0,6,61
chr10	101758343	.	CCT	C	203.88	PASS	AB=0.933;AC=10;AF=0.185;AN=54;BaseQRankSum=1.557;DP=482;FS=0.000;HRun=0;HaplotypeScore=112.5183;InbreedingCoeff=-0.0182;MQ=39.85;MQ0=28;MQRankSum=-0.503;QD=1.24;ReadPosRankSum=0.860;VQSLOD=1.9916;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:16:13.64:27,0,14	0/0:4,0:4:3.01:0,3,39	0/0:12,0:2:0:0,0,0	0/0:19,0:3:4.26:0,4,50	0/0:10,0:10:13.27:0,13,148	0/1:16,1:16:13.48:13,0,252	0/1:23,2:21:61.29:61,0,230	0/0:14,0:10:5.83:0,6,33	0/0:19,0:16:21.07:0,21,316	0/0:25,0:22:50.36:0,50,644	0/0:21,0:19:6.02:0,6,90	0/0:10,0:10:8.97:0,9,95	0/0:11,0:11:4.94:0,5,104	0/0:11,0:10:7.93:0,8,114	0/1:12,2:13:45.22:45,0,253	0/1:18,0:16:5.54:6,0,217	0/1:20,2:19:18.11:18,0,613	1/1:2,7:9:12.03:136,12,0	0/0:15,0:11:18.03:0,18,250	0/0:24,0:21:43.76:0,44,566	0/1:33,1:29:11.82:12,0,643	0/0:26,0:24:30.10:0,30,468	0/0:19,0:18:15.05:0,15,225	0/0:20,0:15:24:0,24,318	0/0:24,0:23:33.09:0,33,437	0/0:30,0:26:38.26:0,38,355	0/1:4,1:4:22.83:23,0,91	./.
chr10	101758380	.	C	CTG	743.01	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.447;DP=602;FS=0.000;HRun=0;HaplotypeScore=141.7434;InbreedingCoeff=0.8195;MQ=53.20;MQ0=4;MQRankSum=-3.815;QD=35.38;ReadPosRankSum=-0.308;VQSLOD=4.9602;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:30.05:0,30,371	0/0:7,0:7:12.04:0,12,156	0/0:41,0:29:70.13:0,70,840	0/0:42,0:27:47.14:0,47,687	0/0:18,0:18:39.10:0,39,478	0/0:18,0:18:30.07:0,30,360	0/0:19,0:18:39.07:0,39,488	0/0:13,0:12:36.11:0,36,453	0/0:19,0:18:33.09:0,33,414	0/0:27,0:25:69.20:0,69,881	0/0:17,0:17:33.11:0,33,429	0/0:15,0:15:5.67:0,6,240	0/0:18,0:18:26.11:0,26,410	0/0:16,0:16:15.05:0,15,195	0/0:18,0:18:36.11:0,36,468	0/0:20,0:19:39.12:0,39,500	0/0:29,0:28:67.10:0,67,852	0/0:21,0:21:15.36:0,15,407	0/0:18,0:15:45.09:0,45,562	0/0:25,0:25:60.16:0,60,761	0/0:42,0:41:93.05:0,93,1146	0/0:23,0:23:51.15:0,51,647	0/0:21,0:20:36.12:0,36,467	0/0:22,0:21:37.33:0,37,503	0/0:23,0:23:45.15:0,45,584	1/1:5,15:20:48.16:801,48,0	0/0:18,0:18:48.05:0,48,601	1/1:0,1:1:3.01:51,3,0
chr10	101758493	.	CTG	C	1309.12	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.897;DP=749;FS=21.935;HRun=0;HaplotypeScore=117.1764;InbreedingCoeff=0.9637;MQ=56.08;MQ0=2;MQRankSum=-2.168;QD=30.44;ReadPosRankSum=2.369;VQSLOD=3.5026;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,120,2036	0/0:11,0:11:24.08:0,24,410	0/0:41,0:32:78.01:0,78,1188	0/0:42,0:35:81.20:0,81,1292	0/0:19,0:19:48.15:0,48,787	0/0:25,0:25:63.22:0,63,1079	0/0:22,0:22:57.20:0,57,979	0/0:32,0:32:69.18:0,69,1106	0/0:20,0:20:42.14:0,42,722	0/0:35,0:33:84.27:0,84,1369	0/0:34,0:34:90.28:0,90,1498	0/0:20,0:20:54.12:0,54,847	0/0:24,0:24:63.21:0,63,1074	0/0:20,0:19:42.14:0,42,727	0/0:19,0:19:48.16:0,48,817	0/0:37,0:37:99:0,102,1755	0/0:32,0:32:82.78:0,83,1364	0/0:21,0:21:47.84:0,48,800	0/0:24,0:24:57.18:0,57,926	0/0:26,0:26:69.24:0,69,1184	0/0:40,0:39:99:0,108,1738	0/0:18,0:18:45.15:0,45,778	0/0:21,0:21:60.19:0,60,993	0/0:34,0:34:84.25:0,84,1386	0/0:19,1:20:8.22:0,8,731	1/1:3,31:34:84.27:1116,84,0	0/0:21,0:20:51.17:0,51,877	1/1:0,9:9:24.08:314,24,0
chr10	101759585	.	GC	G	1766.57	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.192;DP=667;FS=0.000;HRun=1;HaplotypeScore=64.7780;InbreedingCoeff=0.9983;MQ=90.84;MQ0=0;MQRankSum=-3.596;QD=39.26;ReadPosRankSum=0.737;VQSLOD=4.1012;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.23:0,66,1055	0/0:9,0:9:27.09:0,27,425	0/0:33,0:33:92.57:0,93,1438	0/0:19,0:19:47.99:0,48,682	0/0:23,0:23:69.22:0,69,1079	0/0:29,0:29:87.30:0,87,1387	0/0:16,0:16:48.16:0,48,768	0/0:43,0:43:99:0,129,2022	0/0:12,0:12:33.11:0,33,528	0/0:30,0:30:90.29:0,90,1414	0/0:29,0:29:87.30:0,87,1387	0/0:19,0:19:57.19:0,57,911	0/0:31,0:31:93.32:0,93,1484	0/0:25,0:25:75.24:0,75,1175	0/0:26,0:26:78.27:0,78,1245	0/0:16,0:16:48.15:0,48,744	0/0:24,0:24:72.25:0,72,1151	0/0:8,0:8:24.08:0,24,383	0/0:25,0:25:75.24:0,75,1155	0/0:33,0:33:99:0,99,1558	0/0:19,0:19:57.19:0,57,911	0/0:30,0:30:90.30:0,90,1414	0/0:26,0:26:78.24:0,78,1201	0/0:19,0:19:57.19:0,57,911	0/0:24,0:24:72.24:0,72,1129	1/1:0,32:32:96.32:1343,96,0	0/0:32,0:30:96.33:0,96,1519	1/1:0,13:13:39.13:545,39,0
chr10	101760003	.	T	TTC	1249.57	PASS	AB=0.695;AC=22;AF=0.423;AN=52;BaseQRankSum=0.487;DP=552;FS=4.287;HRun=0;HaplotypeScore=109.7169;InbreedingCoeff=0.6929;MQ=64.73;MQ0=10;MQRankSum=-2.315;QD=6.01;ReadPosRankSum=-2.394;VQSLOD=2.7852;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:28:8.04:58,8,0	0/1:8,4:13:65.10:75,0,65	./.	./.	1/1:22,0:22:11.99:114,12,0	0/1:8,11:19:11.88:249,0,12	1/1:8,8:17:9.93:301,10,0	0/0:26,0:26:5.99:0,6,51	0/0:14,0:14:15.01:0,15,153	0/0:26,0:27:20.88:0,21,212	0/0:10,0:11:5.84:0,6,47	1/1:12,0:15:6:52,6,0	1/1:11,0:11:4.82:36,5,0	1/1:24,0:23:20.89:173,21,0	0/0:16,0:18:14.85:0,15,135	1/1:10,9:19:12.04:180,12,0	0/0:14,0:14:14.91:0,15,252	1/1:10,0:10:6.86:43,7,0	0/0:20,0:20:12.54:0,13,148	0/0:22,0:22:24.04:0,24,254	0/0:27,0:27:29.97:0,30,292	0/0:15,0:16:8.85:0,9,80	0/0:18,0:18:18.03:0,18,188	0/0:20,0:20:36.05:0,36,382	0/0:25,0:26:26.84:0,27,277	1/1:17,0:17:12:110,12,0	0/0:29,0:32:32.69:0,33,294	1/1:11,0:11:5.99:50,6,0
chr10	101760600	.	TAA	T	2535.03	PASS	AB=0.815;AC=17;AF=0.304;AN=56;BaseQRankSum=7.435;DP=559;FS=14.592;HRun=13;HaplotypeScore=78.4946;InbreedingCoeff=0.7504;MQ=76.56;MQ0=2;MQRankSum=1.117;QD=12.43;ReadPosRankSum=5.761;VQSLOD=0.6679;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:57.09:553,57,0	1/1:1,1:6:11.24:65,11,0	0/1:32,0:22:10.04:10,0,144	0/1:19,0:11:15.13:15,0,71	1/1:4,20:24:50.97:485,51,0	0/0:25,0:27:69.13:0,69,880	0/0:16,0:17:44.64:0,45,617	0/0:31,0:32:75.60:0,76,959	0/0:19,0:20:53.62:0,54,674	0/0:21,0:24:55.63:0,56,701	0/0:18,0:19:45.11:0,45,590	1/1:1,16:17:48.08:466,48,0	1/1:5,16:22:38.87:369,39,0	1/1:4,21:26:65.54:606,66,0	0/0:22,0:23:59.60:0,60,738	1/1:4,0:23:35.63:154,36,0	0/0:14,0:15:38.51:0,39,446	0/0:1,0:10:17.47:0,17,60	0/0:17,0:20:35.06:0,35,400	0/0:15,0:16:45.12:0,45,588	0/0:8,0:8:21.06:0,21,285	0/0:23,0:23:54.16:0,54,736	0/0:17,0:17:42.09:0,42,521	0/0:8,0:10:26.56:0,27,323	0/0:14,0:15:41.62:0,42,553	0/0:6,0:24:45.24:0,45,169	0/0:32,0:35:83.23:0,83,1112	0/1:0,1:9:13.57:14,0,27
chr10	101760757	.	AAATCGAAAGACCT	A	1397.67	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.739;DP=433;FS=6.486;HRun=0;HaplotypeScore=153.3534;InbreedingCoeff=0.9081;MQ=93.55;MQ0=0;MQRankSum=-5.856;QD=107.51;ReadPosRankSum=1.693;VQSLOD=3.2665;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.24:0,69,4298	0/0:3,0:3:9.03:0,9,596	0/0:19,0:18:54.19:0,54,2881	0/0:23,0:23:63.06:0,63,3583	0/0:22,0:22:63.19:0,63,3424	0/0:27,0:27:81.26:0,81,5010	0/0:10,0:10:30.10:0,30,1860	0/0:32,0:32:93.31:0,93,5443	0/0:18,0:18:51.18:0,51,3287	0/0:17,0:17:51.18:0,51,3013	0/0:12,0:12:36.12:0,36,2342	0/0:14,0:14:42.14:0,42,2426	0/0:19,0:19:57.17:0,57,3211	0/0:19,0:19:57.20:0,57,3699	0/0:8,0:8:24.08:0,24,1589	0/0:18,0:18:54.19:0,54,3341	0/0:22,0:22:66.23:0,66,4079	0/0:10,0:10:30.10:0,30,2027	0/0:24,0:24:69.23:0,69,3762	0/0:10,0:10:30.09:0,30,1708	0/0:18,0:18:54.19:0,54,3629	0/0:7,0:7:21.07:0,21,1276	0/0:10,0:10:30.10:0,30,1932	0/0:12,0:12:36.12:0,36,2375	0/0:7,0:7:21.06:0,21,1185	1/1:0,11:11:30.10:1258,30,0	0/0:15,0:15:45.15:0,45,2859	1/1:0,2:2:6.02:252,6,0
chr10	101760894	.	A	ATAAT	887.06	PASS	AC=4;AF=0.080;AN=50;BaseQRankSum=-4.190;DP=271;FS=9.636;HRun=0;HaplotypeScore=41.6844;InbreedingCoeff=0.5504;MQ=63.03;MQ0=0;MQRankSum=-0.320;QD=29.57;ReadPosRankSum=-0.347;VQSLOD=1.9535;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:48.13:0,48,732	0/0:1,0:7:8.88:0,9,84	./.	./.	0/0:17,0:17:30.10:0,30,490	0/0:20,0:20:33.11:0,33,532	0/0:3,0:3:6.02:0,6,98	0/0:33,0:33:57.15:0,57,815	0/0:5,0:5:15.05:0,15,245	0/0:14,0:14:30.10:0,30,484	0/0:8,0:8:18.06:0,18,294	0/0:4,0:4:6.02:0,6,98	0/0:5,0:5:6.02:0,6,98	0/0:4,0:4:3:0,3,25	0/0:5,0:5:12.04:0,12,196	0/0:0,0:2:3:0,3,27	0/0:21,0:21:57.19:0,57,930	0/0:4,0:4:9.03:0,9,147	0/0:17,0:17:36.09:0,36,499	0/0:5,0:5:6.02:0,6,88	0/0:8,0:8:15.05:0,15,234	0/0:4,0:4:3.01:0,3,49	./.	0/0:1,0:1:3.01:0,3,49	0/0:18,0:18:45.12:0,45,681	1/1:7,9:17:30.09:636,30,0	0/0:10,0:10:21.07:0,21,343	1/1:0,9:12:15.05:365,15,0
chr10	101761050	.	AC	A	516.26	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.723;DP=350;FS=0.943;HRun=8;HaplotypeScore=42.1481;InbreedingCoeff=0.8589;MQ=73.62;MQ0=0;MQRankSum=-1.462;QD=21.51;ReadPosRankSum=2.022;VQSLOD=3.6680;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:33.10:0,33,394	0/0:2,0:3:8.43:0,8,40	0/0:7,0:7:21.04:0,21,219	0/0:6,0:6:11.97:0,12,111	0/0:13,0:13:33.08:0,33,375	0/0:23,0:23:60.18:0,60,721	0/0:8,0:8:24.07:0,24,290	0/0:31,0:31:66.12:0,66,767	0/0:13,0:13:36.10:0,36,423	0/0:13,0:13:36.11:0,36,434	0/0:10,0:10:24.07:0,24,290	0/0:3,0:3:3.01:0,3,36	0/0:8,0:8:18.05:0,18,214	0/0:9,0:9:27.08:0,27,326	0/0:11,0:11:30.09:0,30,361	0/0:2,0:10:25.46:0,25,126	0/0:11,0:11:27.08:0,27,326	0/0:0,0:12:34.50:0,35,175	0/0:19,0:19:51.16:0,51,616	0/0:13,0:13:32.90:0,33,393	0/0:6,0:6:15.05:0,15,181	0/0:9,0:10:26.94:0,27,293	0/0:20,0:20:57.17:0,57,679	0/0:10,0:10:27.08:0,27,326	0/0:24,0:24:63.18:0,63,749	1/1:1,11:12:33.05:319,33,0	0/0:18,0:18:54.17:0,54,652	1/1:1,11:12:33.05:319,33,0
chr10	101761284	.	GTGCACTAAGCAGC	G	12137.68	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.487;DP=606;FS=0.836;HRun=0;HaplotypeScore=233.6563;InbreedingCoeff=0.9744;MQ=93.35;MQ0=0;MQRankSum=-15.350;QD=87.32;ReadPosRankSum=1.079;VQSLOD=4.7217;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:65.92:2557,66,0	1/1:0,6:6:15.05:629,15,0	0/0:31,0:31:93.32:0,93,4880	0/0:32,0:32:83.22:0,83,3748	1/1:0,24:24:29.43:1121,29,0	0/0:31,0:31:93.32:0,93,5587	0/0:23,0:23:69.24:0,69,3978	0/0:28,0:28:84.28:0,84,4844	0/0:26,0:26:75.24:0,75,4591	0/0:26,0:26:78.27:0,78,4712	0/0:13,0:13:39.13:0,39,2486	1/1:0,20:20:44.79:1885,45,0	1/1:0,21:21:48.16:2011,48,0	1/1:0,19:19:48.16:1923,48,0	0/0:26,0:26:78.27:0,78,5053	1/1:0,16:16:42.14:1760,42,0	0/0:25,0:25:75.24:0,75,4596	1/1:0,3:3:6.02:251,6,0	0/0:11,0:11:33.10:0,33,1849	0/0:20,0:20:60.21:0,60,3780	0/0:35,0:35:99:0,105,6771	0/0:25,0:25:75.24:0,75,4903	0/0:16,0:16:48.16:0,48,3121	0/0:26,0:26:78.27:0,78,5096	0/0:19,0:19:57.20:0,57,3704	0/0:24,0:24:72.25:0,72,4791	0/0:26,0:26:78.27:0,78,4978	0/0:4,0:4:12.04:0,12,574
chr10	101763138	.	CTCT	C	462.28	PASS	AB=0.880;AC=15;AF=0.268;AN=56;BaseQRankSum=8.258;DP=368;FS=25.356;HRun=0;HaplotypeScore=92.5700;InbreedingCoeff=-0.3704;MQ=66.33;MQ0=10;MQRankSum=-6.622;QD=3.17;ReadPosRankSum=-0.752;VQSLOD=-0.2421;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:11:27.09:0,27,648	0/1:6,0:6:41.29:41,0,138	0/0:57,0:21:39.52:0,40,591	0/0:59,0:24:35.85:0,36,551	0/0:12,0:12:15.40:0,15,427	0/1:5,1:7:40.72:41,0,215	0/1:7,1:8:8.44:8,0,420	0/1:19,1:20:24.33:24,0,1041	0/1:5,1:6:55.55:56,0,203	0/0:5,0:5:14.70:0,15,199	0/1:7,3:10:9.55:10,0,346	0/0:8,0:7:20.99:0,21,456	0/0:5,0:5:12.04:0,12,254	0/0:9,0:8:5.80:0,6,383	0/1:14,3:16:99:134,0,513	0/1:7,1:8:37.32:37,0,350	0/1:7,1:8:9.22:9,0,348	0/0:4,0:4:9.03:0,9,207	0/0:11,0:11:13.09:0,13,588	0/1:8,4:12:99:118,0,347	0/0:13,0:13:17.03:0,17,760	0/1:8,2:10:51.41:51,0,354	0/1:9,3:12:45.78:46,0,379	0/0:14,1:15:21.51:0,22,672	0/0:9,0:9:3.01:0,3,330	0/1:14,1:15:19.30:19,0,610	0/1:5,0:5:2.84:3,0,279	0/1:2,0:2:14.98:15,0,66
chr10	101763983	.	G	GT	594.09	PASS	AB=0.726;AC=4;AF=0.071;AN=56;BaseQRankSum=1.904;DP=349;FS=0.826;HRun=9;HaplotypeScore=45.6843;InbreedingCoeff=0.4767;MQ=66.28;MQ0=0;MQRankSum=1.041;QD=13.82;ReadPosRankSum=-1.976;VQSLOD=2.6715;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:32.98:0,33,283	0/0:6,0:6:18:0,18,156	0/0:8,0:7:11.98:0,12,104	0/0:5,0:5:6:0,6,52	0/0:12,0:12:13.01:0,13,188	0/0:20,0:20:20.58:0,21,335	0/0:15,0:15:35.93:0,36,305	0/0:29,0:29:47.91:0,48,410	0/0:11,0:11:29.99:0,30,260	0/0:12,0:12:32.99:0,33,286	0/0:11,0:11:18.04:0,18,222	0/0:12,0:12:32.99:0,33,286	0/0:8,0:8:20.99:0,21,182	0/0:10,0:10:23.98:0,24,208	0/0:11,0:11:6.98:0,7,234	0/0:15,0:15:44.99:0,45,391	0/0:14,0:14:32.61:0,33,286	0/0:5,0:5:15:0,15,130	0/0:13,0:14:41:0,41,336	0/1:11,1:12:3.25:3,0,196	0/0:11,0:11:32.92:0,33,271	0/0:15,0:15:29.94:0,30,257	0/0:12,0:12:26.90:0,27,226	0/0:17,0:17:47.95:0,48,410	0/0:11,0:11:29.99:0,30,260	1/1:3,19:22:31.06:551,31,0	0/0:10,0:10:20.99:0,21,182	0/1:1,8:9:8.01:148,0,8
chr10	101766713	.	CAT	C	3909.98	PASS	AB=0.858;AC=21;AF=0.375;AN=56;BaseQRankSum=10.587;DP=392;FS=3.378;HRun=0;HaplotypeScore=51.8674;InbreedingCoeff=0.6255;MQ=72.51;MQ0=4;MQRankSum=-0.029;QD=19.95;ReadPosRankSum=3.093;VQSLOD=3.3733;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:54.17:670,54,0	1/1:2,11:11:21.07:260,21,0	0/1:8,0:7:0:0,0,0	0/1:9,0:9:45.39:45,0,49	1/1:2,17:19:42.13:521,42,0	0/0:16,0:16:36.12:0,36,591	0/0:5,0:5:9.03:0,9,148	0/0:39,0:40:90.29:0,90,1429	0/0:8,0:8:15.05:0,15,242	0/0:18,0:18:42.14:0,42,681	0/1:14,2:16:29.25:29,0,595	1/1:3,15:18:36.11:446,36,0	1/1:1,9:9:24.08:298,24,0	1/1:5,11:16:27.97:337,28,0	0/0:8,0:8:21.07:0,21,344	0/1:2,11:12:22.13:270,0,22	0/0:13,0:13:30.10:0,30,483	0/0:9,0:16:20.95:0,21,174	0/0:20,0:20:48.16:0,48,788	0/1:10,2:12:41.25:41,0,401	0/0:11,0:11:27.09:0,27,424	0/0:4,0:4:6.02:0,6,98	0/0:6,0:6:12.04:0,12,197	0/0:3,0:3:9.03:0,9,148	0/0:15,0:15:36.12:0,36,591	1/1:5,19:24:10.95:658,11,0	0/0:13,0:13:30.10:0,30,490	1/1:2,12:14:27.08:335,27,0
chr10	101767904	.	AACAC	A	576.03	PASS	AB=0.905;AC=13;AF=0.260;AN=50;BaseQRankSum=0.736;DP=512;FS=1.005;HRun=0;HaplotypeScore=87.5974;InbreedingCoeff=0.5101;MQ=67.50;MQ0=17;MQRankSum=1.863;QD=4.47;ReadPosRankSum=2.605;VQSLOD=1.4981;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:19:20.77:227,21,0	1/1:3,0:3:2.92:17,3,0	./.	./.	0/1:12,8:20:9.97:41,0,10	0/0:27,0:27:17.73:0,18,225	0/0:15,0:13:7.83:0,8,70	0/0:17,0:17:8.85:0,9,56	0/0:19,0:19:20.93:0,21,230	0/0:18,0:17:11.83:0,12,161	0/0:11,0:14:11.69:0,12,141	1/1:14,1:15:23.86:299,24,0	1/1:11,0:10:3.48:40,3,0	1/1:17,0:17:6.02:77,6,0	0/0:16,0:16:15.44:0,15,262	0/0:19,0:20:20.75:0,21,291	0/0:23,0:21:24.08:0,24,501	0/0:25,0:24:9.61:0,10,65	0/1:24,0:23:1:1,0,126	0/0:23,0:23:18.05:0,18,339	0/0:26,0:25:22.64:0,23,439	0/0:17,0:17:6.02:0,6,99	./.	0/0:28,0:28:29.44:0,29,520	0/0:14,0:14:3.01:0,3,69	0/0:14,0:12:14.63:0,15,99	0/1:19,0:18:25.76:26,0,144	0/0:7,0:7:3.46:0,3,25
chr10	101769163	.	T	TGA	1822.31	PASS	AB=0.948;AC=29;AF=0.518;AN=56;BaseQRankSum=-1.504;DP=627;FS=37.285;HRun=0;HaplotypeScore=94.5412;InbreedingCoeff=0.2688;MQ=61.55;MQ0=17;MQRankSum=1.241;QD=4.02;ReadPosRankSum=0.188;VQSLOD=0.6348;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:5.50:47,6,0	0/1:8,0:8:0.20:0,0,0	0/1:41,0:22:0:0,0,0	0/1:38,0:13:0:0,0,0	1/1:17,0:15:8.02:56,8,0	0/1:21,11:33:67.98:68,0,97	0/1:9,0:9:32.24:36,0,32	1/1:23,0:23:2.88:15,3,0	0/0:25,0:26:24.97:0,25,225	0/0:26,0:25:11.57:0,12,78	0/0:14,0:14:12.03:0,12,127	1/1:18,0:20:25.06:230,25,0	1/1:18,0:19:11.98:98,12,0	1/1:19,0:18:8.83:58,9,0	0/0:18,0:21:32.75:0,33,316	0/0:20,0:20:12.48:0,12,55	0/1:27,2:28:0.84:331,0,1	0/1:11,2:13:23.15:133,0,23	1/1:16,0:16:10.57:97,11,0	0/1:26,0:26:14.42:119,0,14	0/1:25,0:25:92.69:143,0,93	0/1:27,0:27:40.99:145,0,41	0/0:16,0:16:1.73:0,2,51	0/0:28,0:28:32.91:0,33,337	0/0:20,0:20:21.49:0,21,135	1/1:18,0:18:17.01:115,17,0	0/1:24,3:27:32.51:272,0,33	1/1:17,0:16:8.41:32,8,0
chr10	101769644	.	T	TGGA	7445.19	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.016;DP=569;FS=10.192;HRun=0;HaplotypeScore=128.3453;InbreedingCoeff=0.9630;MQ=82.68;MQ0=0;MQRankSum=-13.751;QD=48.66;ReadPosRankSum=3.172;VQSLOD=6.7469;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:18.06:413,18,0	1/1:0,4:4:12.04:261,12,0	0/0:25,0:25:65.91:0,66,1018	0/0:15,0:14:28.49:0,28,544	1/1:7,17:24:66.18:1295,66,0	0/0:23,0:23:66.20:0,66,1110	0/0:19,0:19:54.15:0,54,862	0/0:24,0:24:63.19:0,63,1029	0/0:29,0:29:87.29:0,87,1488	0/0:25,0:25:69.23:0,69,1190	0/0:28,0:28:84.20:0,84,1382	1/1:0,15:15:36.12:788,36,0	1/1:1,22:24:60.21:1259,60,0	1/1:1,19:20:36.12:774,36,0	0/0:33,0:33:96.28:0,96,1633	1/1:0,17:18:45.15:1004,45,0	0/0:16,0:16:48.15:0,48,819	1/1:3,6:9:17.96:315,18,0	0/0:21,0:21:63.19:0,63,1029	0/0:29,0:29:84.29:0,84,1473	0/0:16,0:16:45.01:0,45,767	0/0:21,0:21:63.20:0,63,1080	0/0:27,0:27:81.26:0,81,1384	0/0:12,0:12:36.07:0,36,576	0/0:20,0:20:57.20:0,57,1006	1/1:1,21:23:13.29:1272,13,0	0/0:33,0:33:96.32:0,96,1665	1/1:0,1:1:3.01:64,3,0
chr10	101769650	.	T	TAAAACTTTTTGGAAAAGC	34397.97	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=18.084;DP=613;FS=5.023;HRun=0;HaplotypeScore=315.0644;InbreedingCoeff=0.9094;MQ=77.15;MQ0=0;MQRankSum=-18.242;QD=161.49;ReadPosRankSum=-0.110;VQSLOD=4.1247;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,1:21:32.91:1757,33,0	1/1:5,2:7:21.07:1617,21,0	0/0:21,0:21:21.32:0,21,1209	0/0:14,0:13:27.06:0,27,895	1/1:29,7:36:96.20:6273,96,0	0/0:23,0:23:63.22:0,63,2942	0/0:16,0:16:48.16:0,48,1980	0/0:26,0:26:66.22:0,66,2675	0/0:27,0:27:75.26:0,75,3790	0/0:24,0:24:57.20:0,57,2839	0/0:28,0:28:81.28:0,81,3761	1/1:16,4:21:60.08:3910,60,0	1/1:27,10:39:99:7068,102,0	1/1:14,7:21:54.12:3534,54,0	0/0:31,0:31:87.28:0,87,4178	1/1:20,4:24:60.14:3668,60,0	0/0:17,0:17:51.16:0,51,2298	1/1:13,2:15:24.05:1477,24,0	0/0:20,0:20:60.16:0,60,2514	0/0:28,0:28:84.29:0,84,4150	0/0:14,0:14:39.13:0,39,1879	0/0:19,0:19:57.20:0,57,2613	0/0:28,0:28:81.23:0,81,3699	0/0:10,0:10:30.10:0,30,1483	0/0:22,0:22:63.17:0,63,2508	0/1:25,0:25:84.66:4630,0,85	0/0:32,0:32:90.28:0,90,4094	1/1:3,0:3:9.03:465,9,0
chr10	101769654	.	A	ACTTTTTGG	11636.96	PASS	AB=0.944;AC=11;AF=0.196;AN=56;BaseQRankSum=18.022;DP=603;FS=6.513;HRun=0;HaplotypeScore=268.4798;InbreedingCoeff=-0.0205;MQ=75.85;MQ0=0;MQRankSum=-17.388;QD=55.41;ReadPosRankSum=1.353;VQSLOD=3.7414;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:21:99:511,0,172	1/1:8,0:8:18.95:534,19,0	0/0:19,0:19:44.94:0,45,951	0/0:14,0:13:30.07:0,30,733	0/1:36,0:36:99:1787,0,189	0/0:23,0:23:69.22:0,69,1973	0/0:16,0:16:48.16:0,48,1402	0/0:26,0:26:78.26:0,78,2241	0/0:26,0:26:78.27:0,78,2323	0/0:20,0:20:60.21:0,60,1811	0/0:29,0:29:87.29:0,87,2480	0/1:21,0:21:99:1309,0,116	0/1:38,0:38:99:2374,0,297	0/1:20,0:20:59.58:1239,0,60	0/0:30,0:30:90.30:0,90,2641	0/1:24,0:24:99:1353,0,332	0/0:17,0:17:51.16:0,51,1480	0/1:14,0:14:33.18:525,0,33	0/0:21,0:21:63.22:0,63,1834	0/0:28,0:28:84.29:0,84,2502	0/0:14,0:14:42.14:0,42,1213	0/0:20,0:20:57.20:0,57,1604	0/0:27,0:27:81.25:0,81,2382	0/0:10,0:10:30.10:0,30,909	0/0:21,0:21:63.19:0,63,1734	0/1:16,8:24:59.44:1908,0,59	0/0:32,0:32:93.29:0,93,2629	0/1:2,1:3:67.71:98,0,68
chr10	101769655	.	A	AAAAGCAAAAC	12681.91	PASS	AB=0.970;AC=12;AF=0.214;AN=56;BaseQRankSum=17.859;DP=611;FS=2.447;HRun=0;HaplotypeScore=291.0912;InbreedingCoeff=0.0740;MQ=75.53;MQ0=0;MQRankSum=-17.288;QD=59.26;ReadPosRankSum=3.094;VQSLOD=4.2140;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:22:99:489,0,130	1/1:8,0:8:2.14:580,2,0	0/0:18,0:19:18.75:0,19,1125	0/0:14,0:13:30.07:0,30,741	0/1:36,0:36:99:2052,0,99	0/0:23,0:23:69.21:0,69,2113	0/0:16,0:16:48.16:0,48,1570	0/0:26,0:26:78.24:0,78,2243	0/0:26,0:26:78.26:0,78,2546	0/0:20,0:20:60.20:0,60,1942	0/0:29,0:29:87.27:0,87,2741	0/1:22,0:22:44.96:1388,0,45	0/1:39,0:39:35.56:2630,0,36	0/1:21,0:21:17.10:1222,0,17	0/0:31,0:31:90.29:0,90,2891	0/1:23,0:23:99:1260,0,151	0/0:17,0:17:51.18:0,51,1629	0/1:14,0:14:46.33:478,0,46	0/0:22,0:22:63.21:0,63,1991	0/0:28,0:28:84.29:0,84,2812	0/0:14,0:14:42.14:0,42,1336	0/0:21,0:21:57.20:0,57,1858	0/0:27,0:27:78.26:0,78,2554	0/0:11,0:11:30.10:0,30,1001	0/0:21,0:21:63.21:0,63,1885	0/1:17,8:25:76.05:2270,0,76	0/0:32,0:32:96.26:0,96,2899	1/1:2,1:3:9.03:311,9,0
chr10	101770961	.	TTG	T	2000.63	PASS	AB=1.000;AC=13;AF=0.250;AN=52;BaseQRankSum=2.906;DP=451;FS=0.000;HRun=0;HaplotypeScore=87.1060;InbreedingCoeff=0.8463;MQ=67.60;MQ0=10;MQRankSum=-3.507;QD=25.01;ReadPosRankSum=-0.436;VQSLOD=4.1164;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:6:12.02:160,12,0	1/1:0,9:9:6.02:74,6,0	0/0:16,0:11:5.51:0,6,382	0/0:30,0:22:50.83:0,51,1004	1/1:17,0:17:39.12:574,39,0	0/0:21,0:21:60.15:0,60,984	0/0:20,0:19:51.16:0,51,889	0/0:25,0:25:75.24:0,75,1272	0/0:18,0:17:48.13:0,48,792	0/0:17,0:17:48.16:0,48,855	0/0:9,0:9:24.08:0,24,399	1/1:14,0:14:41.99:537,42,0	./.	0/0:22,0:22:63.22:0,63,1082	0/0:15,0:15:30.08:0,30,544	1/1:10,0:10:20.89:200,21,0	0/0:13,0:13:36.12:0,36,646	0/1:11,0:11:73.18:222,0,73	0/0:9,0:9:27.08:0,27,436	0/0:18,0:18:38.98:0,39,464	0/0:26,0:25:66.19:0,66,1125	0/0:17,0:17:48.16:0,48,840	0/0:20,0:20:60.19:0,60,999	0/0:21,0:19:45.11:0,45,775	0/0:18,0:18:48.16:0,48,815	1/1:12,0:12:36:413,36,0	0/0:18,0:18:32.54:0,33,744	./.
chr10	101770963	.	G	GCT	3157.78	PASS	AB=1.000;AC=42;AF=0.778;AN=54;BaseQRankSum=1.871;DP=523;FS=6.665;HRun=0;HaplotypeScore=112.2843;InbreedingCoeff=-0.0155;MQ=61.99;MQ0=24;MQRankSum=0.421;QD=6.48;ReadPosRankSum=1.577;VQSLOD=2.4895;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:9:0.47:2,0,0	0/1:12,0:10:0:0,0,0	1/1:16,0:11:2.64:12,3,0	0/0:29,0:21:19.96:0,20,130	1/1:17,0:17:1.55:4,2,0	1/1:22,0:22:19.65:314,20,0	1/1:24,0:22:29.68:244,30,0	0/1:26,0:26:43.64:115,0,44	1/1:19,0:17:20.98:175,21,0	0/1:18,0:18:15.54:234,0,16	0/1:13,0:13:30.33:60,0,30	1/1:14,0:14:8.88:61,9,0	1/1:19,0:19:8.84:55,9,0	1/1:24,0:24:20.86:158,21,0	0/1:16,0:16:49.46:98,0,49	1/1:10,0:9:11.38:66,11,0	0/1:18,0:17:0.85:195,0,1	1/1:12,0:12:8.28:62,8,0	1/1:14,0:13:15.33:111,15,0	1/1:9,10:18:3.01:46,3,0	1/1:30,0:25:31.90:284,32,0	0/1:19,0:19:30.97:82,0,31	0/1:22,0:22:18.35:145,0,18	0/1:25,0:21:32.48:119,0,32	0/1:20,0:20:66.99:120,0,67	1/1:21,0:20:38.08:282,38,0	1/1:22,0:22:35.32:259,35,0	./.
chr10	101771031	.	T	TGG	1247.35	PASS	AB=0.952;AC=13;AF=0.232;AN=56;BaseQRankSum=11.356;DP=609;FS=8.356;HRun=1;HaplotypeScore=132.8074;InbreedingCoeff=0.5660;MQ=47.32;MQ0=57;MQRankSum=-5.164;QD=8.00;ReadPosRankSum=2.784;VQSLOD=0.1403;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:21:12.96:253,13,0	0/1:3,0:3:4.96:43,0,5	0/0:54,0:17:41.89:0,42,380	0/0:52,0:9:23.77:0,24,218	0/1:24,0:24:0.38:131,0,0	0/0:19,0:19:28.65:0,29,247	0/0:25,0:22:38.89:0,39,335	0/0:16,0:15:40.48:0,40,340	0/0:18,0:17:34:0,34,267	0/0:14,0:13:38.94:0,39,355	0/0:10,0:9:11.82:0,12,100	1/1:17,1:18:25.79:296,26,0	0/1:15,0:14:13.57:125,0,14	0/0:24,0:23:47.97:0,48,440	0/0:30,0:30:56.67:0,57,487	0/1:16,0:15:10.24:142,0,10	0/0:17,0:16:32.61:0,33,289	1/1:2,11:14:7.53:66,8,0	0/0:8,0:6:17.98:0,18,172	0/0:12,0:12:16.51:0,17,123	0/0:42,0:39:80.83:0,81,734	0/0:19,0:18:44.98:0,45,408	0/0:12,0:12:20.96:0,21,171	0/0:36,0:33:56.90:0,57,520	0/0:21,0:21:38.82:0,39,335	0/1:30,0:28:82:250,0,82	0/0:24,0:24:47.50:0,48,340	1/1:7,0:5:14.91:113,15,0
chr10	101771604	.	CTT	C	347.28	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.593;DP=646;FS=1.215;HRun=4;HaplotypeScore=85.5618;InbreedingCoeff=0.9986;MQ=84.87;MQ0=0;MQRankSum=-3.330;QD=28.94;ReadPosRankSum=1.698;VQSLOD=2.6980;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.31:0,90,1686	0/0:11,0:11:33.11:0,33,618	0/0:23,0:23:66.23:0,66,1208	0/0:18,0:18:54.14:0,54,946	0/0:33,0:33:99:0,99,1814	0/0:27,0:27:81.28:0,81,1514	0/0:14,0:14:42.14:0,42,783	0/0:39,0:39:99:0,111,2074	0/0:26,0:26:78.27:0,78,1462	0/0:34,0:34:99:0,99,1835	0/0:25,0:25:72.23:0,72,1314	0/0:16,0:16:48.16:0,48,893	0/0:23,0:23:66.22:0,66,1202	0/0:18,0:18:51.17:0,51,955	0/0:23,0:23:69.23:0,69,1261	0/0:24,0:24:69.24:0,69,1293	0/0:15,0:15:42.14:0,42,785	1/1:0,12:12:30.10:442,30,0	0/0:19,0:19:54.19:0,54,1004	0/0:31,0:31:87.28:0,87,1598	0/0:13,0:13:39.12:0,39,679	0/0:26,0:26:78.27:0,78,1447	0/0:32,0:32:96.32:0,96,1761	0/0:14,0:14:42.10:0,42,751	0/0:21,0:21:63.22:0,63,1181	0/0:32,0:32:96.32:0,96,1765	0/0:35,0:35:99:0,105,1967	0/0:11,0:11:30.10:0,30,562
chr10	101772542	.	T	TCA	1895.90	PASS	AB=0.649;AC=10;AF=0.179;AN=56;BaseQRankSum=10.835;DP=982;FS=41.418;HRun=0;HaplotypeScore=167.6507;InbreedingCoeff=0.7454;MQ=56.51;MQ0=9;MQRankSum=-9.394;QD=13.54;ReadPosRankSum=1.031;VQSLOD=1.5009;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:27:10.51:62,11,0	1/1:7,4:11:12.04:187,12,0	0/0:43,0:25:33.14:0,33,516	0/0:45,0:36:78.17:0,78,923	1/1:15,6:21:15.03:209,15,0	0/0:25,0:24:63.18:0,63,780	0/0:32,0:31:66.20:0,66,818	0/0:61,0:60:99:0,141,1766	0/0:53,0:53:99:0,132,1651	0/0:55,0:55:99:0,153,1894	0/0:31,0:31:75.23:0,75,932	0/1:18,20:37:23.20:625,0,23	0/1:12,15:27:10.07:558,0,10	0/0:42,0:42:99:0,102,1286	0/0:64,0:64:99:0,163,2030	1/1:7,9:16:30.02:418,30,0	0/0:39,0:39:90.29:0,90,1130	0/0:17,0:16:32.05:0,32,251	0/0:27,0:26:57.13:0,57,688	0/0:42,0:42:99:0,108,1321	0/0:75,0:74:99:0,177,2168	0/0:26,0:27:69.05:0,69,846	0/0:19,0:19:51.16:0,51,642	0/0:58,0:57:99:0,133,1648	0/0:29,0:29:72.23:0,72,907	0/0:21,0:21:41.48:0,41,336	0/0:23,0:23:45.14:0,45,567	0/0:12,0:12:35.90:0,36,294
chr10	101772576	.	TCA	T	2567.77	PASS	AB=0.598;AC=16;AF=0.286;AN=56;BaseQRankSum=13.933;DP=1023;FS=73.917;HRun=0;HaplotypeScore=176.9706;InbreedingCoeff=0.7474;MQ=54.02;MQ0=23;MQRankSum=-11.712;QD=19.60;ReadPosRankSum=-3.475;VQSLOD=0.6306;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,9:13:8.49:222,8,0	1/1:2,3:5:3.01:39,3,0	0/0:44,0:18:40.36:0,40,539	0/0:52,0:22:29.04:0,29,681	1/1:4,4:8:2.91:39,3,0	0/0:23,1:24:63.20:0,63,1035	0/0:40,0:40:99:0,105,1696	0/0:63,0:58:99:0,123,2147	0/0:57,0:57:99:0,156,2523	0/0:56,0:56:99:0,140,2316	0/0:32,0:32:81.28:0,81,1355	1/1:9,19:27:51.10:631,51,0	1/1:9,17:26:45.10:545,45,0	0/0:47,0:47:99:0,132,2120	0/0:69,0:69:99:0,205,3414	0/1:3,12:14:23.47:285,0,23	0/0:41,0:41:99:0,112,1845	1/1:3,7:9:24.01:291,24,0	0/0:32,0:25:57.19:0,57,936	0/0:44,0:44:99:0,126,2051	0/0:110,0:108:99:0,283,4588	0/0:33,0:33:81.28:0,81,1351	0/0:24,0:24:72.21:0,72,1153	0/0:63,0:62:99:0,147,2382	0/0:35,0:34:89.89:0,90,1495	0/1:7,9:15:37.88:313,0,38	0/0:24,0:24:69.24:0,69,1159	1/1:0,10:10:30.10:390,30,0
chr10	101772607	.	TACATAC	T	327.09	PASS	AB=0.881;AC=6;AF=0.107;AN=56;BaseQRankSum=7.120;DP=1073;FS=27.945;HRun=0;HaplotypeScore=276.5309;InbreedingCoeff=0.2721;MQ=51.84;MQ0=40;MQRankSum=-6.561;QD=4.81;ReadPosRankSum=-0.105;VQSLOD=0.5502;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:8.96:0,9,25	0/0:4,0:5:2.80:0,3,8	0/0:52,0:17:51.16:0,51,1286	0/0:58,0:19:48.15:0,48,1301	0/0:10,0:11:1.50:0,2,5	0/0:26,0:26:67.92:0,68,2276	0/0:48,0:48:99:0,132,3987	0/0:67,0:52:99:0,135,3811	0/0:76,0:75:99:0,197,6301	0/0:48,0:47:99:0,118,3934	0/0:27,0:27:78.27:0,78,2559	0/1:25,0:25:19.29:19,0,85	0/1:19,0:19:29.06:145,0,29	0/0:51,0:51:99:0,138,4288	0/0:78,0:78:99:0,211,6239	0/0:20,0:19:19.99:0,20,157	0/0:42,0:42:99:0,111,3500	1/1:4,0:4:3.01:40,3,0	0/0:40,0:22:60.11:0,60,1644	0/0:38,0:38:89.37:0,89,3376	0/0:124,0:121:99:0,307,10012	0/0:34,0:34:93.26:0,93,2974	0/0:34,0:34:96.28:0,96,2946	0/0:52,0:52:99:0,138,4525	0/0:37,0:37:99:0,99,3169	0/1:12,4:16:99:176,0,177	0/0:25,0:25:72.23:0,72,2349	0/1:2,1:3:1.22:64,0,1
chr10	101772609	.	CAT	C	534.12	PASS	AB=0.887;AC=16;AF=0.286;AN=56;BaseQRankSum=12.030;DP=1071;FS=117.831;HRun=0;HaplotypeScore=204.5053;InbreedingCoeff=0.7103;MQ=51.73;MQ0=39;MQRankSum=-11.273;QD=4.73;ReadPosRankSum=-2.434;VQSLOD=-0.7411;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,2:12:16.89:82,17,0	1/1:4,1:5:5.42:25,5,0	0/0:54,0:18:54.15:0,54,864	0/0:57,0:18:48.13:0,48,833	1/1:9,3:12:2.19:12,2,0	0/0:25,0:25:68.91:0,69,1296	0/0:50,1:51:99:0,144,2448	0/0:66,0:51:99:0,128,2263	0/0:75,0:75:99:0,208,3734	0/0:51,0:50:99:0,100,2411	0/0:30,0:30:84.21:0,84,1532	1/1:15,9:25:27.47:190,27,0	1/1:11,7:18:22.14:189,22,0	0/0:47,0:47:99:0,138,2490	0/0:77,0:77:99:0,210,3609	0/1:16,4:19:34.46:95,0,34	0/0:41,0:41:99:0,114,2042	1/1:1,1:2:3:27,3,0	0/0:38,0:22:60.08:0,60,988	0/0:36,0:36:89.35:0,89,1925	0/0:126,0:122:99:0,317,5791	0/0:34,0:34:96.21:0,96,1747	0/0:32,0:32:96.20:0,96,1696	0/0:54,0:54:99:0,141,2545	0/0:37,0:37:99:0,102,1842	0/1:15,1:15:56.81:57,0,167	0/0:26,0:26:72.23:0,72,1344	1/1:3,0:3:5.92:38,6,0
chr10	101772624	.	A	ACG	798.39	PASS	AB=0.739;AC=14;AF=0.250;AN=56;BaseQRankSum=9.679;DP=1054;FS=102.381;HRun=0;HaplotypeScore=219.3930;InbreedingCoeff=0.5511;MQ=52.81;MQ0=28;MQRankSum=-9.372;QD=6.49;ReadPosRankSum=-0.898;VQSLOD=0.1583;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,4:10:0.08:0,0,0	1/1:4,3:7:1.88:28,2,0	0/0:50,0:16:40.68:0,41,578	0/0:59,0:16:42.13:0,42,642	0/1:5,10:15:0.13:0,0,0	0/0:24,0:23:66.65:0,67,947	0/0:45,0:45:99:0,127,1923	0/0:64,0:50:99:0,138,2066	0/0:73,0:72:99:0,199,2932	0/0:49,0:48:99:0,133,1988	0/0:27,0:27:78.24:0,78,1145	1/1:15,11:26:2.32:205,2,0	1/1:12,5:17:1.96:261,2,0	0/0:43,0:43:99:0,129,1923	0/0:64,0:64:99:0,181,2678	0/1:8,10:18:50.99:141,0,51	0/0:42,0:42:99:0,114,1674	1/1:2,1:3:8.21:85,8,0	0/0:29,0:20:57.19:0,57,871	0/0:43,0:43:99:0,126,1850	0/0:129,0:125:99:0,310,4572	0/0:37,0:37:99:0,108,1610	0/0:29,0:29:87.28:0,87,1309	0/0:61,0:61:99:0,156,2305	0/0:37,0:37:99:0,105,1557	0/1:15,0:21:99:161,0,224	0/0:24,0:24:69.15:0,69,997	1/1:2,0:5:2.79:60,3,0
chr10	101772625	.	C	CGCAT	890.29	PASS	AB=0.959;AC=9;AF=0.161;AN=56;BaseQRankSum=8.639;DP=1056;FS=92.943;HRun=0;HaplotypeScore=256.2383;InbreedingCoeff=0.2828;MQ=52.80;MQ0=28;MQRankSum=-8.678;QD=8.81;ReadPosRankSum=-2.663;VQSLOD=-0.7470;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:0.29:1,0,0	0/0:7,0:7:5.27:0,5,26	0/0:51,0:16:41.71:0,42,785	0/0:59,0:16:43.70:0,44,867	0/1:16,0:16:0.06:0,0,2	0/0:24,0:23:65.78:0,66,1268	0/0:46,0:46:99:0,129,2646	0/0:65,0:51:99:0,147,2903	0/0:72,0:71:99:0,198,3937	0/0:50,0:49:99:0,141,2739	0/0:29,0:29:78.24:0,78,1549	0/1:26,0:26:27.89:28,0,37	0/0:17,0:17:10.50:0,11,85	0/0:43,0:43:99:0,129,2625	0/0:62,0:62:99:0,181,3665	0/1:18,0:18:19.94:20,0,69	0/0:42,0:42:81.64:0,82,2255	0/1:3,0:3:4.06:4,0,37	0/0:28,0:20:60.20:0,60,1223	0/0:43,0:43:99:0,126,2517	0/0:127,0:122:99:0,319,6262	0/0:37,0:37:99:0,108,2199	0/0:29,0:29:87.28:0,87,1783	0/0:62,0:62:99:0,156,3164	0/0:38,0:38:99:0,109,2134	0/1:17,6:22:99:797,0,260	0/0:24,0:24:69.69:0,70,1355	1/1:5,0:5:9.03:160,9,0
chr10	101772650	.	TCA	T	1621.85	PASS	AB=0.740;AC=15;AF=0.268;AN=56;BaseQRankSum=12.448;DP=976;FS=133.173;HRun=0;HaplotypeScore=216.5664;InbreedingCoeff=0.6605;MQ=54.53;MQ0=20;MQRankSum=-11.379;QD=9.95;ReadPosRankSum=0.091;VQSLOD=0.7462;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:1,5:6:0:0,0,0	0/1:5,5:10:20.82:66,0,21	0/0:32,0:10:15.05:0,15,248	0/1:33,1:9:1.85:2,0,157	1/1:5,13:18:2.54:38,3,0	0/0:22,0:21:62.88:0,63,1014	0/0:43,0:43:99:0,120,1861	0/0:55,0:52:99:0,147,2161	0/0:70,0:70:99:0,178,2825	0/0:46,0:45:99:0,129,2097	0/0:28,0:28:72.20:0,72,1172	1/1:7,25:32:29.50:407,30,0	1/1:4,16:20:24.25:387,24,0	0/0:45,0:45:99:0,120,1981	0/0:74,0:74:99:0,161,2925	1/1:4,14:18:7.93:139,8,0	0/0:35,0:35:84.24:0,84,1347	1/1:2,3:5:8.96:96,9,0	0/0:31,0:24:54.15:0,54,801	0/0:31,0:31:87.30:0,87,1463	0/0:123,0:121:99:0,293,4715	0/0:36,0:36:99:0,105,1768	0/0:28,0:28:81.28:0,81,1357	0/0:59,0:59:99:0,141,2197	0/0:33,0:33:90.25:0,90,1423	0/1:6,15:20:48.62:509,0,49	0/0:15,0:15:39.10:0,39,601	1/1:0,4:5:8.04:153,8,0
chr10	101772677	.	C	CACACATAT	5890.07	PASS	AB=0.728;AC=15;AF=0.268;AN=56;BaseQRankSum=12.849;DP=1005;FS=66.476;HRun=0;HaplotypeScore=308.8760;InbreedingCoeff=0.6188;MQ=52.06;MQ0=23;MQRankSum=-12.876;QD=43.31;ReadPosRankSum=0.988;VQSLOD=2.5515;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:1.25:38,1,0	1/1:11,1:12:12.50:262,13,0	0/0:27,0:4:6.02:0,6,166	0/0:25,0:5:11.59:0,12,169	1/1:14,6:20:2.50:174,2,0	0/0:21,0:20:60.18:0,60,1548	0/0:40,0:40:83.07:0,83,2296	0/0:66,0:56:99:0,153,3601	0/0:70,0:69:99:0,169,4238	0/0:56,0:51:99:0,138,3576	0/0:31,0:31:90.28:0,90,2271	1/1:10,16:26:41.39:1559,41,0	1/1:14,7:21:38.95:1201,39,0	0/0:51,0:51:99:0,141,3493	0/0:75,0:75:99:0,205,4996	0/1:12,5:17:10.67:550,0,11	0/0:33,0:33:81.23:0,81,1938	1/1:1,3:4:12.03:398,12,0	0/0:35,0:18:45.14:0,45,1137	0/0:31,0:31:84.26:0,84,2110	0/0:123,0:123:99:0,294,7415	0/0:48,0:47:99:0,129,3293	0/0:28,0:28:78.22:0,78,1919	0/0:59,0:58:99:0,137,3531	0/0:30,0:30:78.26:0,78,2015	0/1:16,6:21:99:1328,0,115	0/0:19,0:19:51.16:0,51,1199	0/1:2,3:5:30.53:379,0,31
chr10	101772679	.	C	CACATAT	3914.80	PASS	AB=0.981;AC=14;AF=0.250;AN=56;BaseQRankSum=13.143;DP=1009;FS=77.879;HRun=0;HaplotypeScore=282.8768;InbreedingCoeff=0.5619;MQ=51.98;MQ0=22;MQRankSum=-12.810;QD=28.16;ReadPosRankSum=0.389;VQSLOD=0.6301;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:2.16:14,2,0	0/1:11,1:12:3.35:313,0,3	0/0:27,0:4:8.86:0,9,156	0/0:24,0:4:11.22:0,11,170	1/1:20,2:22:3.21:163,3,0	0/0:21,0:20:63.18:0,63,1369	0/0:39,0:39:99:0,100,2125	0/0:69,0:59:99:0,165,3347	0/0:69,0:68:99:0,177,3833	0/0:54,0:49:99:0,138,3139	0/0:31,0:31:93.31:0,93,2054	1/1:26,0:26:41.29:964,41,0	1/1:20,1:21:38.83:750,39,0	0/0:51,0:51:99:0,141,3070	0/0:77,0:77:99:0,217,4547	0/1:18,0:18:12.80:314,0,13	0/0:34,0:34:81.23:0,81,1726	1/1:5,0:5:11.53:235,12,0	0/0:35,0:17:48.15:0,48,1023	0/0:32,0:32:84.75:0,85,1870	0/0:123,0:122:99:0,303,6650	0/0:47,0:46:99:0,129,2918	0/0:29,0:29:81.23:0,81,1758	0/0:58,0:57:99:0,138,3074	0/0:31,0:31:84.26:0,84,1801	0/1:21,0:20:90.70:935,0,91	0/0:19,0:19:51.65:0,52,1096	0/1:5,0:5:15.49:226,0,15
chr10	101772707	.	AAC	A	1889.62	PASS	AB=0.564;AC=17;AF=0.304;AN=56;BaseQRankSum=13.452;DP=1011;FS=2.057;HRun=0;HaplotypeScore=191.3413;InbreedingCoeff=0.8281;MQ=52.16;MQ0=24;MQRankSum=-13.262;QD=16.15;ReadPosRankSum=-4.682;VQSLOD=2.8885;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:3,2:5:5.48:40,5,0	1/1:3,9:12:20.73:213,21,0	0/0:38,0:7:12.04:0,12,200	0/0:28,0:3:9.03:0,9,134	1/1:4,19:23:47.50:336,47,0	0/0:26,0:25:75.26:0,75,1271	0/0:43,0:43:99:0,114,1856	0/0:71,0:61:99:0,138,2227	0/0:60,0:60:99:0,156,2520	0/0:57,0:55:99:0,147,2390	0/0:26,0:26:69.23:0,69,1160	1/1:4,13:17:14.86:171,15,0	1/1:2,15:17:44.79:518,45,0	0/0:51,0:51:99:0,135,2226	0/0:82,0:81:99:0,217,3711	1/1:2,7:9:8.15:162,8,0	0/0:38,1:39:69.12:0,69,1608	1/1:4,2:6:4.23:57,4,0	0/0:30,0:18:51.17:0,51,853	0/0:35,0:35:81.26:0,81,1331	0/0:131,0:129:99:0,322,5243	0/0:43,0:43:99:0,114,1810	0/0:28,0:28:84.26:0,84,1314	0/0:61,0:60:99:0,126,2106	0/0:23,0:23:66.22:0,66,1037	0/1:5,17:21:16.37:526,0,16	0/0:21,0:21:60.21:0,60,1023	1/1:3,3:6:6.73:60,7,0
chr10	101772774	.	A	ATT	510.11	PASS	AB=0.825;AC=9;AF=0.161;AN=56;BaseQRankSum=8.125;DP=928;FS=14.415;HRun=0;HaplotypeScore=175.1568;InbreedingCoeff=0.0528;MQ=56.80;MQ0=8;MQRankSum=-7.445;QD=5.73;ReadPosRankSum=-1.739;VQSLOD=2.2308;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:7:8.72:9,0,70	0/1:9,2:11:2.34:2,0,117	0/0:26,0:9:21.05:0,21,302	0/0:24,0:13:29.39:0,29,472	1/1:19,10:27:0.79:57,1,0	0/0:31,0:30:87.28:0,87,1364	0/0:38,0:38:99:0,108,1655	0/0:75,0:63:99:0,190,2874	0/0:74,0:74:99:0,204,3214	0/0:60,0:58:99:0,169,2695	0/0:23,0:23:66.21:0,66,1044	0/1:2,1:3:3.11:38,0,3	0/1:7,2:9:36.45:47,0,36	0/0:45,0:45:99:0,129,2051	0/0:66,0:65:99:0,199,3088	0/0:4,0:4:2.92:0,3,24	0/0:48,0:48:99:0,141,2254	0/1:5,1:6:62.63:63,0,81	0/0:25,0:17:51.17:0,51,796	0/0:29,0:29:87.28:0,87,1380	0/0:113,0:110:99:0,295,4583	0/0:31,0:31:90.28:0,90,1385	0/0:25,0:25:75.23:0,75,1174	0/0:47,0:47:95.38:0,95,1770	0/0:31,0:31:87.21:0,87,1322	0/1:9,5:13:99:270,0,104	0/0:23,0:23:57.98:0,58,1029	0/1:6,3:9:85.86:154,0,86
chr10	101772783	.	CAT	C	141.08	PASS	AB=0.975;AC=11;AF=0.196;AN=56;BaseQRankSum=10.174;DP=941;FS=20.413;HRun=0;HaplotypeScore=176.2011;InbreedingCoeff=0.3374;MQ=55.13;MQ0=22;MQRankSum=-7.930;QD=1.49;ReadPosRankSum=-4.425;VQSLOD=0.0170;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:5:1.25:0,1,4	0/1:12,0:12:24.09:24,0,45	0/0:20,0:6:18.05:0,18,261	0/0:20,0:10:11.49:0,11,166	0/1:30,0:28:9.40:9,0,10	0/0:33,0:32:81.68:0,82,1485	0/0:39,0:37:99:0,105,1906	0/0:73,0:58:99:0,162,2639	0/0:75,0:75:99:0,209,3581	0/0:65,0:62:99:0,156,3042	0/0:24,0:24:69.21:0,69,1239	0/1:3,0:3:6.25:6,0,10	1/1:9,0:9:0.38:75,0,0	0/0:48,0:48:99:0,138,2362	0/0:61,0:60:99:0,137,2997	1/1:5,0:5:1.34:14,1,0	0/0:49,0:49:99:0,135,2478	0/1:6,1:6:2.78:3,0,77	0/0:26,0:15:45.12:0,45,774	0/0:31,0:31:74.03:0,74,1330	0/0:119,2:117:99:0,284,5210	0/0:32,0:32:95.89:0,96,1613	0/0:21,0:21:60.16:0,60,1056	0/0:46,2:48:99:0,102,1989	0/0:31,0:31:84.25:0,84,1523	1/1:18,0:16:11.85:106,12,0	0/0:21,0:21:59.76:0,60,997	0/1:11,0:11:23.10:39,0,23
chr10	101772785	.	T	TATAC	546.43	PASS	AB=0.914;AC=11;AF=0.196;AN=56;BaseQRankSum=8.837;DP=941;FS=3.806;HRun=0;HaplotypeScore=213.0435;InbreedingCoeff=0.5079;MQ=54.84;MQ0=24;MQRankSum=-8.670;QD=5.69;ReadPosRankSum=-1.525;VQSLOD=2.3315;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:5:2.98:24,3,0	1/1:8,4:12:5.79:270,6,0	0/0:17,0:6:17.97:0,18,229	0/0:21,0:9:6.26:0,6,104	1/1:23,7:28:4.04:84,4,0	0/0:33,0:32:90.25:0,90,1611	0/0:40,0:38:99:0,102,1962	0/0:72,0:54:99:0,130,2604	0/0:76,0:76:99:0,202,3801	0/0:63,0:60:99:0,179,3335	0/0:24,0:24:66.21:0,66,1258	0/0:3,0:3:5.92:0,6,39	0/1:10,0:10:12.60:13,0,36	0/0:49,0:49:99:0,141,2574	0/0:58,0:57:99:0,168,3134	1/1:5,0:5:2.94:18,3,0	0/0:49,0:49:99:0,135,2509	0/0:7,0:6:10.90:0,11,64	0/0:28,0:17:24.15:0,24,760	0/0:29,0:29:78.20:0,78,1373	0/0:118,0:115:99:0,295,5540	0/0:34,0:34:99:0,99,1825	0/0:21,0:21:60.18:0,60,1143	0/0:50,0:50:99:0,109,2152	0/0:31,0:31:84.27:0,84,1635	0/1:21,1:20:24.04:24,0,36	0/0:21,0:21:28.75:0,29,990	0/1:8,3:11:2.49:255,0,2
chr10	101772791	.	CAT	C	929.05	PASS	AB=0.791;AC=16;AF=0.286;AN=56;BaseQRankSum=10.971;DP=963;FS=9.254;HRun=0;HaplotypeScore=178.0523;InbreedingCoeff=0.4155;MQ=54.41;MQ0=28;MQRankSum=-8.806;QD=7.32;ReadPosRankSum=-2.378;VQSLOD=1.8238;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:7:1.77:31,2,0	0/1:9,4:13:33.23:184,0,33	0/0:17,0:6:12.02:0,12,192	0/1:15,0:5:6.82:7,0,47	1/1:21,9:28:5.13:31,5,0	0/0:32,0:31:86.94:0,87,1477	0/0:40,0:38:99:0,102,1890	0/0:73,0:50:99:0,144,2480	0/0:72,0:72:99:0,198,3590	0/0:66,0:62:99:0,175,3154	0/0:23,0:23:65.93:0,66,1131	1/1:4,0:3:5.67:29,6,0	1/1:11,0:11:1.34:62,1,0	0/0:50,0:50:99:0,145,2462	0/0:62,0:61:99:0,164,2947	1/1:5,0:5:1.35:14,1,0	0/0:50,0:49:99:0,135,2390	1/1:7,0:6:0.46:88,0,0	0/0:33,0:20:56.86:0,57,830	0/0:29,0:29:81.07:0,81,1328	0/0:125,1:122:99:0,311,5568	0/0:35,0:35:99:0,105,1880	0/0:23,0:23:50.22:0,50,1188	0/0:51,0:51:99:0,111,2187	0/0:33,0:33:93.21:0,93,1668	0/1:11,10:19:31.81:405,0,32	0/0:21,0:20:53.52:0,54,931	0/1:8,5:13:56.32:231,0,56
chr10	101772809	.	TAC	T	220.52	PASS	AB=0.737;AC=7;AF=0.130;AN=54;BaseQRankSum=6.751;DP=1018;FS=0.000;HRun=0;HaplotypeScore=187.2522;InbreedingCoeff=0.6822;MQ=51.10;MQ0=50;MQRankSum=-6.421;QD=3.62;ReadPosRankSum=-1.284;VQSLOD=2.6565;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:6:0:0,0,0	0/1:9,5:13:62.49:126,0,62	0/0:13,0:5:12.03:0,12,154	./.	1/1:17,16:31:14.65:139,15,0	0/0:34,0:33:93.30:0,93,1539	0/0:46,0:44:96.29:0,96,1556	0/0:79,0:43:99:0,105,1744	0/0:69,0:68:99:0,180,2979	0/0:69,0:63:99:0,179,2862	0/0:23,0:23:54.18:0,54,907	1/1:6,1:6:2.74:12,3,0	0/0:11,0:11:14.34:0,14,166	0/0:49,0:48:99:0,123,1994	0/0:64,0:62:99:0,171,2718	0/0:8,0:7:8.95:0,9,66	0/0:49,0:48:99:0,121,1883	1/1:7,0:6:7.19:69,7,0	0/0:39,0:22:60.20:0,60,985	0/0:35,0:33:93.30:0,93,1539	0/0:130,0:119:99:0,289,4733	0/0:38,0:38:99:0,105,1758	0/0:22,0:22:57.19:0,57,951	0/0:55,0:56:99:0,127,2149	0/0:34,0:34:87.27:0,87,1434	0/0:32,1:28:56.53:0,57,975	0/0:22,0:20:56.54:0,57,883	0/0:10,0:10:30.09:0,30,438
chr10	101772830	.	ACACACACT	A	805.21	PASS	AB=0.923;AC=9;AF=0.161;AN=56;BaseQRankSum=8.410;DP=1035;FS=5.551;HRun=0;HaplotypeScore=285.0185;InbreedingCoeff=-0.0678;MQ=50.27;MQ0=58;MQRankSum=-8.734;QD=5.30;ReadPosRankSum=-3.942;VQSLOD=1.5060;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:6:0.47:2,0,0	0/1:13,2:13:99:128,0,469	0/0:25,0:7:13.57:0,14,274	0/0:23,0:2:6.02:0,6,85	0/1:26,8:32:99:154,0,212	0/0:37,0:36:99:0,102,4038	0/0:38,0:36:72.15:0,72,2647	0/0:81,0:47:99:0,108,3524	0/0:66,0:65:99:0,171,5759	0/0:57,0:47:99:0,120,4047	0/0:28,0:28:75.25:0,75,2615	0/1:12,0:10:31.48:31,0,190	0/1:14,1:14:54.77:55,0,467	0/0:50,0:49:99:0,129,4711	0/0:56,0:55:99:0,156,5545	0/0:9,0:8:18.06:0,18,416	0/0:44,0:43:99:0,118,4236	0/1:8,0:6:31.91:32,0,347	0/0:33,0:19:48.13:0,48,1711	0/0:35,0:32:89.52:0,90,3288	0/0:123,1:114:99:0,252,9221	0/0:41,0:40:99:0,105,3903	0/0:24,0:24:63.20:0,63,2316	0/0:56,0:56:99:0,122,4972	0/0:32,0:32:69.66:0,70,2722	0/1:42,5:40:99:439,0,2255	0/0:24,0:22:65.96:0,66,2138	0/1:12,1:12:95.98:96,0,636
chr10	101772859	.	CACACAT	C	2517.56	PASS	AB=0.867;AC=12;AF=0.214;AN=56;BaseQRankSum=11.127;DP=1009;FS=107.900;HRun=0;HaplotypeScore=245.5430;InbreedingCoeff=0.3267;MQ=50.19;MQ0=41;MQRankSum=-11.954;QD=14.30;ReadPosRankSum=-0.315;VQSLOD=-0.4339;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,3:11:6.37:134,6,0	0/1:9,2:9:99:123,0,170	0/0:35,0:8:10.59:0,11,296	0/0:40,0:6:18.05:0,18,331	0/1:35,3:36:44.70:45,0,325	0/0:36,0:35:99:0,99,2661	0/0:31,0:31:63.19:0,63,1507	0/0:78,0:53:99:0,120,3138	0/0:45,0:44:99:0,105,2716	0/0:42,0:36:93.29:0,93,2201	0/0:26,0:26:69.22:0,69,2097	1/1:4,12:16:21.82:611,22,0	0/1:12,8:19:40.45:521,0,40	0/0:53,0:52:99:0,155,4458	0/0:52,0:51:99:0,135,3983	1/1:4,11:15:15.05:342,15,0	0/0:37,0:37:99:0,102,2708	0/1:12,0:11:14.33:14,0,67	0/0:31,0:18:51.16:0,51,1314	0/0:38,0:36:98.94:0,99,2520	0/0:117,0:106:99:0,264,7500	0/0:39,0:38:99:0,105,2850	0/0:25,0:24:63.20:0,63,1758	0/0:53,0:53:99:0,135,4178	0/0:29,0:28:78.07:0,78,1903	0/1:29,10:36:99:789,0,1073	0/0:26,0:24:72.03:0,72,2180	0/1:10,1:9:91.70:102,0,92
chr10	101772861	.	CACAT	C	1198.18	PASS	AB=0.933;AC=11;AF=0.196;AN=56;BaseQRankSum=11.141;DP=1012;FS=82.023;HRun=0;HaplotypeScore=220.1491;InbreedingCoeff=0.3563;MQ=50.31;MQ0=44;MQRankSum=-10.236;QD=8.81;ReadPosRankSum=-0.537;VQSLOD=0.0223;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:11:6.32:58,6,0	0/1:11,0:9:47.19:47,0,198	0/0:34,0:8:12.04:0,12,303	0/0:40,0:6:18.06:0,18,352	0/0:37,0:35:1.91:0,2,388	0/0:35,0:34:99:0,99,2247	0/0:30,0:30:63.16:0,63,1314	0/0:80,0:55:99:0,133,2852	0/0:44,0:43:99:0,105,2394	0/0:45,0:39:99:0,102,1972	0/0:25,0:25:69.19:0,69,1643	1/1:16,0:16:11.12:260,11,0	0/1:19,0:18:55.56:218,0,56	0/0:53,0:53:99:0,141,3739	0/0:52,0:51:99:0,115,3304	1/1:15,0:15:15.03:153,15,0	0/0:40,0:40:99:0,100,2277	0/1:6,6:11:68.10:260,0,68	0/0:33,0:18:51.13:0,51,1073	0/0:37,0:37:80.81:0,81,2184	0/0:114,0:104:99:0,258,6145	0/0:40,0:39:99:0,114,2497	0/0:26,0:25:47.20:0,47,1454	0/0:53,0:53:99:0,141,3446	0/0:30,0:29:78.84:0,79,1657	0/1:38,0:37:99:294,0,980	0/0:26,0:24:72.02:0,72,1699	0/1:11,0:9:64.69:65,0,85
chr10	101772927	.	AAC	A	67.70	PASS	AB=0.970;AC=6;AF=0.107;AN=56;BaseQRankSum=5.036;DP=875;FS=8.149;HRun=0;HaplotypeScore=137.8410;InbreedingCoeff=0.1002;MQ=54.67;MQ0=17;MQRankSum=-1.702;QD=0.50;ReadPosRankSum=0.384;VQSLOD=2.1609;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:3.47:0,3,26	0/0:7,0:6:2.92:0,3,17	0/0:61,0:28:39.36:0,39,945	0/0:55,1:25:42.65:0,43,731	0/0:16,0:15:2.99:0,3,24	0/0:23,1:24:32.31:0,32,1023	0/1:20,1:21:37.75:38,0,433	0/0:48,0:37:57.19:0,57,928	0/0:41,1:42:62.39:0,62,1496	0/0:41,0:41:99:0,102,1584	0/0:27,0:27:63.22:0,63,1022	1/1:18,0:17:3.22:13,3,0	0/0:23,0:23:8.09:0,8,54	0/0:45,0:45:99:0,103,1731	0/0:37,0:37:69.22:0,69,1100	0/0:25,0:25:7.96:0,8,84	0/0:30,1:31:41.26:0,41,1116	0/1:14,0:14:9.91:10,0,12	0/0:26,0:24:14.43:0,14,711	0/0:37,0:37:99:0,99,1587	0/1:69,6:73:98.53:99,0,2017	0/0:32,1:33:47.34:0,47,1253	0/0:19,0:19:48.16:0,48,781	0/0:49,2:51:46.47:0,46,1680	0/0:23,0:22:60.20:0,60,967	0/0:17,0:16:35.83:0,36,251	0/0:29,1:29:26.28:0,26,935	0/1:7,0:7:23.23:23,0,76
chr10	101772934	.	A	ACACT	1276.16	PASS	AB=0.537;AC=3;AF=0.054;AN=56;BaseQRankSum=-0.008;DP=879;FS=0.764;HRun=0;HaplotypeScore=167.9070;InbreedingCoeff=0.6018;MQ=57.05;MQ0=14;MQRankSum=-5.670;QD=41.17;ReadPosRankSum=-0.661;VQSLOD=3.8904;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:5.94:0,6,44	0/0:6,0:5:9.35:0,9,59	0/0:63,0:34:78.20:0,78,1269	0/0:49,0:26:39.76:0,40,937	0/0:17,0:16:12.87:0,13,100	0/0:30,0:30:90.20:0,90,1420	0/0:20,0:20:41.98:0,42,640	0/0:45,0:34:66.20:0,66,1156	0/0:42,0:42:99:0,111,1927	0/0:39,0:39:99:0,114,1993	0/0:28,0:28:81.20:0,81,1333	0/0:17,0:16:8.17:0,8,46	0/0:27,0:27:41.36:0,41,285	0/0:46,0:46:99:0,129,2164	0/0:37,0:36:79.82:0,80,1364	0/0:26,0:26:30.58:0,31,232	0/0:29,0:29:65.21:0,65,1361	0/0:11,0:11:13.87:0,14,117	0/0:32,0:31:90.01:0,90,1196	0/0:38,0:38:99:0,111,1928	0/0:70,0:68:99:0,177,2870	0/0:32,0:32:90.26:0,90,1563	0/0:19,0:19:48.16:0,48,902	0/0:49,0:49:99:0,135,2223	0/0:26,0:25:69.18:0,69,1190	0/1:3,17:21:7.03:883,0,7	0/0:27,0:26:72.19:0,72,1225	1/1:0,9:9:21.07:497,21,0
chr10	101774540	.	G	GTGTATGTCCC	19886.98	PASS	AB=0.638;AC=14;AF=0.259;AN=54;BaseQRankSum=7.509;DP=616;FS=3.603;HRun=0;HaplotypeScore=197.1918;InbreedingCoeff=0.8063;MQ=85.31;MQ0=0;MQRankSum=-16.855;QD=110.48;ReadPosRankSum=-0.494;VQSLOD=4.9512;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,8:20:45.15:2021,45,0	1/1:8,11:19:51.18:2528,51,0	0/0:20,0:20:51.16:0,51,1406	0/0:25,0:25:50.42:0,50,1459	1/1:10,12:25:30.10:1351,30,0	0/0:17,0:17:48.16:0,48,1565	0/0:21,0:21:60.21:0,60,1973	0/0:30,0:30:90.30:0,90,2796	0/0:14,0:14:39.13:0,39,1251	0/0:21,0:21:60.21:0,60,1955	0/0:22,0:22:60.20:0,60,1865	1/1:8,17:25:66.23:3188,66,0	0/1:10,15:28:27.85:3188,0,28	0/0:25,0:25:75.24:0,75,2258	0/0:33,0:33:93.31:0,93,2969	1/1:13,20:33:87.30:4131,87,0	0/0:30,0:30:84.27:0,84,2649	1/1:1,6:8:21.03:979,21,0	0/0:15,0:15:45.15:0,45,1448	0/0:23,0:23:69.24:0,69,2302	0/0:27,0:27:75.26:0,75,2474	0/0:11,0:11:33.11:0,33,1101	0/0:21,0:21:54.19:0,54,1763	0/0:30,0:30:78.25:0,78,2463	0/0:27,0:27:75.24:0,75,2258	0/1:11,10:22:99:2501,0,137	0/0:24,0:24:72.25:0,72,2332	./.
chr10	101775599	.	AG	A	8965.90	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=20.629;DP=769;FS=0.000;HRun=1;HaplotypeScore=115.6021;InbreedingCoeff=0.9930;MQ=81.44;MQ0=0;MQRankSum=-1.588;QD=38.81;ReadPosRankSum=3.685;VQSLOD=4.5797;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:90.30:1259,90,0	1/1:0,6:6:15.05:209,15,0	0/0:30,0:29:78.98:0,79,1211	0/0:38,0:37:95.90:0,96,1429	1/1:0,39:39:99:1518,114,0	0/0:22,0:22:66.19:0,66,1006	0/0:27,0:27:81.25:0,81,1245	0/0:30,0:30:90.29:0,90,1392	0/0:25,0:25:75.26:0,75,1196	0/0:38,0:38:99:0,114,1761	0/0:26,0:26:75.26:0,75,1196	1/1:0,28:28:81.27:1133,81,0	1/1:0,29:29:84.28:1171,84,0	0/0:35,0:35:99:0,105,1627	0/0:30,0:30:90.31:0,90,1436	1/1:0,31:31:90.30:1258,90,0	0/0:18,0:18:54.18:0,54,858	1/1:0,14:14:36.12:503,36,0	0/0:29,0:29:84.27:0,84,1300	0/0:26,0:26:75.26:0,75,1192	0/0:34,0:34:99:0,102,1579	0/0:28,0:28:84.29:0,84,1333	0/0:25,0:25:75.19:0,75,1102	0/0:26,0:26:78.27:0,78,1239	0/0:21,0:21:60.18:0,60,913	1/1:2,34:36:12.40:1327,12,0	0/0:30,0:30:90.25:0,90,1383	1/1:0,14:14:42.14:587,42,0
chr10	101776195	.	T	TAA	2910.70	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.448;DP=564;FS=27.815;HRun=7;HaplotypeScore=152.3136;InbreedingCoeff=0.9412;MQ=70.99;MQ0=7;MQRankSum=-13.286;QD=21.09;ReadPosRankSum=2.953;VQSLOD=0.6265;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,1:20:44.53:530,45,0	1/1:6,0:6:14.95:122,15,0	0/0:46,0:23:39.55:0,40,330	0/0:41,0:18:16.64:0,17,172	1/1:23,2:25:56.81:485,57,0	0/0:24,0:24:57.12:0,57,636	0/0:12,0:12:8.83:0,9,93	0/0:29,0:29:28.58:0,29,476	0/0:13,0:13:17.90:0,18,199	0/0:27,0:27:38.94:0,39,438	0/0:25,0:25:18.21:0,18,330	1/1:16,0:16:38.90:364,39,0	1/1:20,1:21:42:472,42,0	0/0:24,0:24:29.56:0,30,337	0/0:25,0:25:10.28:0,10,301	1/1:18,1:18:10.75:366,11,0	0/0:19,0:19:35.75:0,36,396	1/1:7,0:7:21.02:221,21,0	0/0:16,0:16:20.93:0,21,243	0/0:23,0:23:41.80:0,42,448	0/0:5,0:5:9.02:0,9,103	0/0:10,0:10:24.07:0,24,278	0/0:19,0:19:35.87:0,36,396	0/0:28,0:28:50.15:0,50,537	0/0:12,0:12:6.92:0,7,183	1/1:20,0:20:51:459,51,0	0/0:27,0:26:36.72:0,37,414	1/1:4,0:4:11.99:102,12,0
chr10	101776197	.	AAAAAAC	A	4747.35	PASS	AB=0.607;AC=17;AF=0.304;AN=56;BaseQRankSum=14.930;DP=563;FS=0.398;HRun=0;HaplotypeScore=161.5368;InbreedingCoeff=0.8960;MQ=68.29;MQ0=8;MQRankSum=-12.938;QD=36.24;ReadPosRankSum=7.118;VQSLOD=4.0498;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,12:20:32.14:563,32,0	1/1:1,5:6:15.05:243,15,0	0/0:49,0:21:39.81:0,40,374	0/0:43,0:17:19.79:0,20,248	1/1:4,19:23:62.04:808,62,0	0/0:25,0:25:66.11:0,66,1424	0/0:12,0:12:23.66:0,24,485	0/0:30,0:30:65.94:0,66,1370	0/0:11,0:11:26.37:0,26,490	0/0:27,0:27:56.85:0,57,1173	0/0:24,0:24:60.13:0,60,1312	1/1:5,10:15:39.09:574,39,0	1/1:10,9:19:50.11:646,50,0	0/0:26,0:26:59.99:0,60,1232	0/0:23,0:23:62.48:0,62,1367	0/1:6,11:16:40.14:575,0,40	0/0:20,0:20:49.24:0,49,1137	1/1:2,5:7:21.05:298,21,0	0/0:15,0:15:33.02:0,33,611	0/0:23,0:23:53.98:0,54,1330	0/0:5,0:5:8.96:0,9,231	0/0:11,0:11:23.89:0,24,512	0/0:18,0:18:35.96:0,36,875	0/0:28,0:28:77.40:0,77,1745	0/0:13,0:13:36.02:0,36,649	1/1:3,17:20:51.12:837,51,0	0/0:29,0:28:57.02:0,57,1251	1/1:0,4:4:12.04:204,12,0
chr10	101776217	.	AAC	A	2294.19	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.152;DP=587;FS=21.421;HRun=0;HaplotypeScore=133.4423;InbreedingCoeff=0.9213;MQ=67.15;MQ0=9;MQRankSum=-12.026;QD=17.12;ReadPosRankSum=1.443;VQSLOD=2.3417;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,1:22:48.43:332,48,0	1/1:6,0:6:17.59:138,18,0	0/0:53,1:23:13.24:0,13,179	0/0:49,0:17:29.35:0,29,221	1/1:22,0:22:51.80:394,52,0	0/0:28,0:28:49.99:0,50,602	0/0:13,0:13:38.28:0,38,352	0/0:37,0:37:43.87:0,44,820	0/0:9,0:9:15.45:0,15,245	0/0:30,0:30:58.38:0,58,838	0/0:23,0:23:7.55:0,8,468	1/1:12,1:13:36.37:285,36,0	1/1:11,0:11:32.87:276,33,0	0/0:22,0:22:48.20:0,48,594	0/0:22,0:22:45.58:0,46,582	1/1:17,1:17:3.83:296,4,0	0/0:22,0:22:40.44:0,40,613	1/1:7,1:8:23.42:166,23,0	0/0:17,0:17:4.70:0,5,306	0/0:24,0:23:60.55:0,61,692	0/0:6,0:6:14.81:0,15,157	0/0:12,0:12:32.06:0,32,319	0/0:16,0:16:17.06:0,17,360	0/0:25,0:25:10.44:0,10,728	0/0:17,0:17:27.78:0,28,339	1/1:24,3:27:67.13:505,67,0	0/0:27,0:26:51.59:0,52,538	1/1:7,0:7:13.77:109,14,0
chr10	101776218	.	AC	A	2001.53	PASS	AB=0.920;AC=21;AF=0.375;AN=56;BaseQRankSum=13.481;DP=590;FS=34.570;HRun=1;HaplotypeScore=124.5227;InbreedingCoeff=0.7630;MQ=66.56;MQ0=8;MQRankSum=-9.994;QD=10.94;ReadPosRankSum=0.999;VQSLOD=0.0970;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:52.18:303,52,0	1/1:7,0:7:20.69:139,21,0	0/0:51,3:23:12.94:0,13,155	0/0:46,0:16:27.95:0,28,212	1/1:22,0:22:56.61:341,57,0	0/0:28,0:28:20.62:0,21,406	0/0:14,0:14:40.88:0,41,310	0/0:37,0:37:35.02:0,35,650	0/1:7,2:9:7.44:7,0,164	0/0:32,0:32:65.62:0,66,751	0/1:24,0:24:5.23:5,0,329	1/1:13,0:13:37.02:234,37,0	1/1:11,0:11:32.55:217,33,0	0/0:23,0:23:17.83:0,18,424	0/0:21,0:21:8.18:0,8,380	1/1:17,0:16:14.49:258,14,0	0/0:22,0:22:23.54:0,24,464	1/1:8,0:8:23.45:146,23,0	0/1:15,1:16:15.88:16,0,238	0/0:24,0:23:57.34:0,57,535	0/0:6,0:6:14.61:0,15,125	0/0:13,0:13:9.49:0,9,208	0/0:16,0:16:11.50:0,12,263	0/0:25,0:25:17.85:0,18,560	0/0:18,0:18:17.16:0,17,272	1/1:28,0:28:72.75:450,73,0	0/0:28,0:27:41.78:0,42,427	1/1:7,0:7:16.50:93,16,0
chr10	101776219	.	C	CA	2999.86	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.295;DP=585;FS=8.624;HRun=15;HaplotypeScore=123.4187;InbreedingCoeff=0.9248;MQ=67.48;MQ0=8;MQRankSum=-12.259;QD=21.90;ReadPosRankSum=2.938;VQSLOD=4.1849;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:22:50.96:499,51,0	1/1:2,5:7:20.46:169,20,0	0/0:49,1:21:2.31:0,2,220	0/0:46,0:17:2.13:0,2,267	1/1:2,20:22:56.57:459,57,0	0/0:27,0:27:58.52:0,59,598	0/0:14,0:14:29.64:0,30,288	0/0:37,0:37:68.31:0,68,698	0/0:10,0:10:20.63:0,21,206	0/0:29,0:29:74.99:0,75,781	0/0:23,0:23:40.80:0,41,407	1/1:3,11:14:38.79:338,39,0	1/1:1,10:11:32.91:274,33,0	0/0:23,0:23:50.29:0,50,505	0/0:22,0:22:33.06:0,33,427	1/1:4,13:16:12.67:332,13,0	0/0:22,0:22:50.63:0,51,513	1/1:4,5:9:19.75:161,20,0	0/0:15,0:15:34.53:0,35,320	0/0:24,0:23:62.64:0,63,586	0/0:5,0:5:15.02:0,15,152	0/0:14,0:14:26.98:0,27,273	0/0:14,0:14:32.69:0,33,319	0/0:23,0:23:62.50:0,62,654	0/0:19,0:19:11.56:0,12,355	1/1:6,22:28:77.93:764,78,0	0/0:29,0:28:34.25:0,34,413	1/1:0,7:7:21:214,21,0
chr10	101776250	.	G	GA	4158.62	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=7.497;DP=502;FS=2.901;HRun=7;HaplotypeScore=91.2892;InbreedingCoeff=0.9945;MQ=66.71;MQ0=1;MQRankSum=-5.187;QD=27.72;ReadPosRankSum=2.323;VQSLOD=4.2029;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:39.12:471,39,0	1/1:0,6:6:18.06:217,18,0	0/0:12,0:12:27.01:0,27,249	0/0:12,0:7:16.22:0,16,101	1/1:2,18:20:48.15:577,48,0	0/0:26,0:26:69.10:0,69,666	0/0:18,0:18:51.06:0,51,486	0/0:31,0:31:84.14:0,84,811	0/0:11,0:11:27.04:0,27,259	0/0:24,0:24:72.12:0,72,695	0/0:18,0:18:48.07:0,48,463	1/1:1,17:18:48.15:579,48,0	1/1:1,12:13:24.07:290,24,0	0/0:17,0:17:48.08:0,48,463	0/0:15,0:15:33.03:0,33,313	1/1:3,18:21:19.17:514,19,0	0/0:18,0:18:48.03:0,48,453	1/1:0,11:11:24.07:290,24,0	0/0:21,0:21:54.07:0,54,516	0/0:15,0:15:38.75:0,39,348	0/0:10,0:10:27.02:0,27,253	0/0:24,0:24:66.09:0,66,631	0/0:12,0:12:30.04:0,30,290	0/0:19,0:19:51.07:0,51,491	0/0:23,0:23:66.10:0,66,637	1/1:7,26:33:72.21:858,72,0	0/0:25,0:25:57.09:0,57,550	1/1:1,10:11:30.09:362,30,0
chr10	101776655	.	T	TC	4527.32	PASS	AB=0.565;AC=17;AF=0.304;AN=56;BaseQRankSum=-1.770;DP=610;FS=8.244;HRun=6;HaplotypeScore=73.2381;InbreedingCoeff=0.9537;MQ=76.24;MQ0=0;MQRankSum=-3.500;QD=29.98;ReadPosRankSum=1.821;VQSLOD=5.4439;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:69.13:868,69,0	1/1:1,6:7:21.06:255,21,0	0/0:26,0:26:48.71:0,49,515	0/0:19,0:19:42.54:0,43,417	1/1:2,13:15:30.10:375,30,0	0/0:36,0:36:96.21:0,96,979	0/0:20,0:20:57.13:0,57,581	0/0:25,0:25:63.13:0,63,638	0/0:14,0:14:36.08:0,36,367	0/0:20,0:20:57.13:0,57,582	0/0:28,0:28:63.13:0,63,642	1/1:2,17:19:48.15:604,48,0	1/1:4,18:22:54.17:675,54,0	0/0:18,0:18:51.12:0,51,520	0/0:30,0:30:90.21:0,90,918	1/1:1,17:18:45.14:566,45,0	0/0:27,0:27:75.11:0,75,747	0/1:3,10:13:0.52:310,0,1	0/0:24,0:24:66.14:0,66,673	0/0:22,0:22:53.41:0,53,504	0/0:18,0:18:48.11:0,48,489	0/0:25,0:25:69.14:0,69,694	0/0:28,0:28:72.24:0,72,755	0/0:24,0:24:63.13:0,63,636	0/0:23,0:23:63.10:0,63,631	1/1:3,20:23:26.89:649,27,0	0/0:32,0:31:90.15:0,90,896	1/1:1,6:7:18.06:226,18,0
chr10	101777495	.	G	GAAAGCCTA	13841.47	PASS	AB=0.579;AC=17;AF=0.304;AN=56;BaseQRankSum=-7.551;DP=613;FS=4.647;HRun=0;HaplotypeScore=141.8780;InbreedingCoeff=0.8754;MQ=91.65;MQ0=0;MQRankSum=-13.994;QD=85.97;ReadPosRankSum=0.509;VQSLOD=5.3027;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,13:25:45.15:1899,45,0	1/1:0,3:5:12:412,12,0	0/0:28,0:28:69.16:0,69,1527	0/0:26,0:26:45.26:0,45,1114	1/1:4,22:33:69.19:2636,69,0	0/0:32,0:32:90.29:0,90,2365	0/0:18,0:18:45.15:0,45,1163	0/0:40,0:40:99:0,99,2524	0/0:18,0:18:54.19:0,54,1470	0/0:17,0:17:51.18:0,51,1370	0/0:25,0:25:69.24:0,69,1767	1/1:2,16:21:39.13:1686,39,0	1/1:6,21:29:51.18:2221,51,0	0/0:24,0:24:69.24:0,69,1903	0/0:19,0:19:57.17:0,57,1401	1/1:3,16:19:54.19:2202,54,0	0/0:11,0:11:30.09:0,30,772	1/1:1,1:2:3.01:131,3,0	0/0:17,0:17:45.13:0,45,1097	0/0:29,0:29:84.27:0,84,2231	0/0:28,0:28:75.23:0,75,1925	0/0:24,0:24:72.25:0,72,1918	0/0:27,0:27:81.25:0,81,2087	0/0:17,0:17:45.15:0,45,1234	0/0:18,0:17:54.19:0,54,1398	0/1:6,15:22:44.96:2145,0,45	0/0:34,0:34:96.32:0,96,2549	1/1:2,3:5:12.04:510,12,0
chr10	101777942	.	A	AAGGG	4681.35	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.693;DP=559;FS=6.142;HRun=0;HaplotypeScore=121.1177;InbreedingCoeff=0.9607;MQ=74.55;MQ0=0;MQRankSum=-13.069;QD=40.71;ReadPosRankSum=-0.924;VQSLOD=4.9822;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,6:20:40.30:773,40,0	1/1:4,2:6:17.54:313,18,0	0/0:27,0:26:52.82:0,53,822	0/0:18,0:16:40.52:0,41,654	1/1:9,6:15:39.07:756,39,0	0/0:23,0:23:66.21:0,66,1242	0/0:24,0:24:72.23:0,72,1384	0/0:31,0:31:90.29:0,90,1698	0/0:17,0:17:51.17:0,51,971	0/0:39,0:38:99:0,105,2064	0/0:23,0:23:69.24:0,69,1323	1/1:7,0:7:20.95:325,21,0	1/1:21,4:25:47.73:665,48,0	0/0:14,0:14:39.13:0,39,757	0/0:20,0:20:60.21:0,60,1169	1/1:9,9:18:48.15:967,48,0	0/0:23,0:23:69.18:0,69,1264	1/1:0,0:1:3.01:74,3,0	0/0:14,0:14:42.13:0,42,719	0/0:36,0:36:99:0,102,2012	0/0:20,0:20:60.21:0,60,1185	0/0:24,0:24:72.25:0,72,1409	0/0:17,0:17:48.08:0,48,809	0/0:20,0:20:60.19:0,60,1161	0/0:26,0:26:75.20:0,75,1334	1/1:17,3:20:44.81:696,45,0	0/0:28,0:28:84.27:0,84,1641	1/1:3,0:3:8.90:111,9,0
chr10	101777992	.	AAGGGAGGG	A	4280.02	PASS	AB=0.579;AC=17;AF=0.304;AN=56;BaseQRankSum=12.145;DP=532;FS=1.085;HRun=0;HaplotypeScore=139.9014;InbreedingCoeff=0.8692;MQ=56.93;MQ0=9;MQRankSum=-9.142;QD=34.80;ReadPosRankSum=2.355;VQSLOD=4.3075;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,5:14:21.07:551,21,0	1/1:4,5:8:12.04:281,12,0	0/0:18,0:14:39.12:0,39,1198	0/0:23,0:17:47.97:0,48,1677	1/1:6,13:19:33.04:725,33,0	0/0:22,0:22:60.19:0,60,2162	0/0:24,0:24:60.21:0,60,2292	0/0:32,0:29:84.27:0,84,2632	0/0:11,0:11:30.10:0,30,1134	0/0:35,0:33:93.63:0,94,3797	0/0:21,0:21:54.18:0,54,1999	1/1:3,7:10:12.04:318,12,0	1/1:8,11:18:24.08:632,24,0	0/0:10,0:10:27.09:0,27,1118	0/0:24,0:24:66.23:0,66,2859	1/1:8,9:17:12.04:321,12,0	0/0:17,0:17:48.16:0,48,1930	1/1:1,0:1:3.01:44,3,0	0/0:13,0:11:24.04:0,24,724	0/0:30,0:30:87.28:0,87,3337	0/0:23,0:22:66.21:0,66,2485	0/0:24,0:24:60.20:0,60,2007	0/0:17,0:17:48.16:0,48,2039	0/0:13,0:13:35.72:0,36,1377	0/0:24,0:24:69.22:0,69,2616	1/1:8,15:22:44.99:1006,45,0	0/0:28,0:28:81.25:0,81,2731	0/1:3,8:11:21.44:401,0,21
chr10	101778160	.	C	CTCTA	1114.63	PASS	AB=0.983;AC=10;AF=0.217;AN=46;BaseQRankSum=-0.618;DP=601;FS=5.965;HRun=0;HaplotypeScore=134.4961;InbreedingCoeff=0.5916;MQ=66.52;MQ0=10;MQRankSum=0.649;QD=7.58;ReadPosRankSum=1.889;VQSLOD=2.1059;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:0.47:0,0,1	./.	./.	./.	1/1:15,0:13:0.75:2,1,0	0/1:27,1:26:99:228,0,196	0/0:7,0:6:3.01:0,3,39	0/1:49,0:45:0:0,0,0	0/0:22,0:22:33.09:0,33,479	0/0:39,0:37:60.20:0,60,890	0/0:18,0:18:30.10:0,30,457	1/1:12,0:13:1.55:4,2,0	./.	0/0:17,0:17:24.07:0,24,346	1/1:18,2:20:30.97:629,31,0	./.	0/0:21,0:20:30.04:0,30,408	0/0:12,0:11:11.27:0,11,143	1/1:16,5:21:18.05:375,18,0	0/0:30,0:30:30.08:0,30,425	0/0:13,0:13:24.06:0,24,323	0/0:21,0:21:36.11:0,36,516	0/0:23,0:22:12.04:0,12,183	0/0:13,0:13:6.02:0,6,92	0/0:22,0:22:27.08:0,27,381	0/0:24,0:20:17.67:0,18,337	0/0:40,0:39:60.20:0,60,903	0/0:11,0:11:6.02:0,6,90
chr10	101778206	.	C	CATG	97.30	PASS	AB=1.000;AC=5;AF=0.100;AN=50;BaseQRankSum=4.129;DP=652;FS=1.274;HRun=0;HaplotypeScore=133.5474;InbreedingCoeff=0.4804;MQ=44.40;MQ0=74;MQRankSum=-2.012;QD=2.32;ReadPosRankSum=0.139;VQSLOD=2.2697;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:12:31.96:32,0,51	./.	./.	./.	1/1:12,1:5:6.02:108,6,0	0/0:31,0:25:51.30:0,51,825	0/0:14,0:9:2.69:0,3,55	0/0:51,0:21:60.04:0,60,923	0/0:29,0:28:70.69:0,71,1273	0/0:55,0:48:99:0,126,2235	0/0:29,0:26:57.19:0,57,1038	1/1:6,4:9:2.24:63,2,0	0/0:8,3:10:3.01:0,3,55	0/0:23,0:23:60.17:0,60,1071	0/0:38,0:35:52.12:0,52,649	0/0:13,3:13:7.27:0,7,114	0/0:33,0:30:63.89:0,64,1063	0/0:13,0:9:15.94:0,16,270	0/0:19,0:13:34.67:0,35,510	0/0:37,0:34:82.48:0,82,1397	0/0:17,0:14:36.06:0,36,602	0/0:23,0:22:51.16:0,51,908	0/0:20,0:17:39.12:0,39,686	0/0:28,0:23:30.09:0,30,511	0/0:30,0:26:63.20:0,63,1133	0/0:31,0:23:17.89:0,18,721	0/0:43,0:41:99:0,117,2066	0/0:13,0:12:18.02:0,18,257
chr10	101778215	.	ATC	A	376.52	PASS	AB=0.862;AC=4;AF=0.083;AN=48;BaseQRankSum=5.988;DP=628;FS=1.052;HRun=0;HaplotypeScore=114.4793;InbreedingCoeff=0.1522;MQ=44.11;MQ0=76;MQRankSum=-4.527;QD=7.84;ReadPosRankSum=-0.017;VQSLOD=2.9076;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,1:11:8.49:0,8,88	./.	./.	./.	./.	0/0:29,0:23:39.10:0,39,673	0/0:16,0:10:3.48:0,3,41	0/0:49,0:17:48.12:0,48,741	0/0:30,0:29:73.11:0,73,1311	0/0:60,0:54:99:0,147,2684	0/0:33,0:30:69.22:0,69,1245	1/1:7,1:7:0.32:37,0,0	0/0:8,1:8:4.26:0,4,59	0/0:21,0:21:51.17:0,51,938	0/0:36,0:33:60.13:0,60,1018	0/0:15,1:13:7.27:0,7,118	0/0:32,0:29:51.11:0,51,876	0/1:11,1:8:17.95:18,0,52	0/0:17,0:12:36.12:0,36,674	0/0:35,0:32:73.45:0,73,1263	0/0:15,0:12:30.10:0,30,579	0/0:21,0:20:42.14:0,42,775	0/0:21,0:18:36.11:0,36,647	0/0:26,1:22:36.12:0,36,695	0/0:29,0:25:60.21:0,60,1119	0/1:21,7:21:99:418,0,267	0/0:41,0:39:99:0,111,2009	0/0:9,1:9:9.03:0,9,174
chr10	101778256	.	C	CT	677.83	PASS	AB=0.830;AC=7;AF=0.130;AN=54;BaseQRankSum=2.340;DP=675;FS=0.000;HRun=1;HaplotypeScore=93.2461;InbreedingCoeff=0.1393;MQ=47.20;MQ0=58;MQRankSum=-6.323;QD=4.71;ReadPosRankSum=-1.777;VQSLOD=-0.5244;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,3:12:1.75:11,2,0	0/0:2,0:2:1.25:0,1,3	./.	0/0:1,0:1:1.25:0,1,3	0/0:5,2:3:1.25:0,1,3	0/0:28,0:23:57.10:0,57,797	0/1:16,2:16:29.53:30,0,153	0/1:31,10:21:99:262,0,319	0/0:31,0:30:77.68:0,78,1033	0/0:54,0:49:99:0,129,1780	0/0:34,0:32:76.48:0,76,1034	0/0:6,7:10:0.69:0,1,2	0/0:9,8:14:4.24:0,4,45	0/0:26,0:26:72.22:0,72,989	0/0:36,0:33:69.23:0,69,965	0/0:11,11:19:4.05:0,4,44	0/1:28,1:27:1.24:1,0,541	0/1:6,4:7:25.61:109,0,26	0/0:19,0:16:44.17:0,44,572	0/0:54,0:52:99:0,134,1844	0/0:13,0:10:24.55:0,25,335	0/0:26,0:25:60.19:0,60,822	0/0:30,0:28:66.22:0,66,923	0/0:29,4:28:48.06:0,48,607	0/0:35,0:32:81.27:0,81,1128	0/1:16,8:20:99:378,0,136	0/0:37,0:34:99:0,99,1343	0/0:10,0:8:6.02:0,6,84
chr10	101778319	.	ATATG	A	778.62	PASS	AB=0.976;AC=7;AF=0.130;AN=54;BaseQRankSum=7.965;DP=729;FS=3.884;HRun=0;HaplotypeScore=141.4132;InbreedingCoeff=0.1614;MQ=50.61;MQ0=29;MQRankSum=-6.928;QD=5.41;ReadPosRankSum=-0.984;VQSLOD=2.5814;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:15:2.22:0,2,7	0/1:7,0:7:0:0,0,0	0/0:13,0:1:3.01:0,3,49	0/0:10,1:5:3.01:0,3,65	./.	0/0:28,1:29:69.20:0,69,1522	0/0:9,0:9:15.05:0,15,366	0/0:51,0:43:99:0,99,2121	0/0:27,0:27:69.22:0,69,1621	0/0:41,1:42:49.37:0,49,2139	0/0:30,0:30:72.25:0,72,1745	0/0:35,0:35:2.78:0,3,69	0/1:35,1:32:8.48:54,0,8	0/0:28,0:28:60.21:0,60,1418	0/0:35,0:35:87.26:0,87,2001	1/1:34,0:31:3.15:25,3,0	0/0:20,1:20:36.12:0,36,789	0/1:11,0:12:54.62:55,0,193	0/0:18,0:16:36.08:0,36,786	0/0:38,0:38:69.24:0,69,1568	0/0:11,0:11:24.08:0,24,567	0/0:32,0:32:75.26:0,75,1818	0/0:29,0:29:66.19:0,66,1419	0/0:13,0:12:9.03:0,9,209	0/0:32,0:32:84.29:0,84,1943	0/1:37,3:37:99:660,0,624	0/0:42,0:41:99:0,108,2503	0/1:12,0:11:99:102,0,191
chr10	101778333	.	ATG	A	162.38	PASS	AB=0.811;AC=8;AF=0.143;AN=56;BaseQRankSum=8.184;DP=754;FS=21.220;HRun=0;HaplotypeScore=120.4375;InbreedingCoeff=0.2715;MQ=53.77;MQ0=22;MQRankSum=-7.004;QD=1.03;ReadPosRankSum=1.984;VQSLOD=1.0388;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,2:15:2.88:15,3,0	0/1:4,2:6:0:0,0,0	0/0:12,0:3:5.99:0,6,58	0/0:12,0:9:11.99:0,12,145	0/0:7,2:6:3.01:0,3,43	0/0:30,0:30:84.26:0,84,1515	0/0:12,0:12:29.12:0,29,492	0/0:56,0:51:99:0,157,2791	0/0:32,0:32:93.30:0,93,1671	0/0:42,0:42:99:0,119,2241	0/0:30,0:30:90.28:0,90,1612	0/0:28,9:33:5.62:0,6,94	0/1:28,8:31:12.12:12,0,47	0/0:27,0:26:78.25:0,78,1409	0/0:39,0:38:99:0,102,1919	1/1:28,11:29:2.74:13,3,0	0/0:21,0:20:45.13:0,45,797	0/0:10,2:11:0.81:0,1,289	0/0:18,0:17:51.16:0,51,905	0/0:37,0:37:99:0,105,1807	0/0:18,0:14:36.09:0,36,597	0/0:32,0:32:96.33:0,96,1777	0/0:28,0:28:84.27:0,84,1510	0/0:10,0:9:18.01:0,18,279	0/0:34,0:34:99:0,99,1833	0/1:32,9:34:99:197,0,720	0/0:48,0:48:99:0,141,2469	0/1:10,2:11:41.32:41,0,157
chr10	101778337	.	ATG	A	127.80	PASS	AB=0.812;AC=8;AF=0.143;AN=56;BaseQRankSum=8.496;DP=755;FS=17.888;HRun=0;HaplotypeScore=122.1231;InbreedingCoeff=0.3032;MQ=54.65;MQ0=20;MQRankSum=-6.386;QD=0.84;ReadPosRankSum=2.065;VQSLOD=1.1086;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,2:14:3.01:32,3,0	0/1:4,2:6:0:0,0,0	0/0:12,0:5:7.19:0,7,83	0/0:12,0:9:9.03:0,9,129	0/0:8,2:6:6.01:0,6,66	0/0:30,0:30:84.26:0,84,1469	0/0:11,0:11:29.13:0,29,508	0/0:57,0:52:99:0,156,2677	0/0:33,0:33:96.30:0,96,1660	0/0:43,0:43:99:0,117,2211	0/0:29,0:29:87.28:0,87,1563	0/0:30,9:33:5.62:0,6,85	0/1:26,7:28:13.58:14,0,31	0/0:25,0:24:72.20:0,72,1302	0/0:38,1:38:99:0,105,1883	1/1:24,11:26:2.74:13,3,0	0/0:21,0:20:48.07:0,48,777	0/0:10,2:11:7.32:0,7,214	0/0:19,0:18:54.14:0,54,890	0/0:35,0:35:99:0,102,1774	0/0:17,0:13:33.11:0,33,587	0/0:32,0:32:96.33:0,96,1758	0/0:33,0:33:96.28:0,96,1590	0/0:10,0:9:18.06:0,18,297	0/0:36,0:36:99:0,105,1858	0/1:34,10:36:99:155,0,661	0/0:47,0:47:99:0,138,2430	0/1:10,2:11:31.99:32,0,157
chr10	101778349	.	CTATA	C	475.74	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=8.841;DP=787;FS=2.501;HRun=0;HaplotypeScore=149.6970;InbreedingCoeff=0.4390;MQ=56.26;MQ0=19;MQRankSum=-7.642;QD=2.18;ReadPosRankSum=1.167;VQSLOD=2.6483;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,10:14:0.86:2,1,0	0/0:6,1:7:2.88:0,3,25	0/0:11,0:7:5.84:0,6,168	0/0:14,0:10:14.92:0,15,187	0/0:11,1:8:11.97:0,12,95	0/0:26,1:27:72.03:0,72,1903	0/0:16,0:16:38.59:0,39,820	0/0:55,0:51:99:0,141,3302	0/0:40,0:40:99:0,114,2616	0/0:46,0:46:99:0,138,3427	0/0:29,0:29:84.27:0,84,2173	1/1:30,11:32:3.01:52,3,0	1/1:24,10:28:8.08:96,8,0	0/0:26,0:25:75.24:0,75,1917	0/0:42,0:41:99:0,108,2696	1/1:33,9:29:5.84:33,6,0	0/0:18,1:18:45.08:0,45,1055	0/1:13,0:12:33.58:34,0,197	0/0:20,0:19:57.14:0,57,1404	0/0:32,0:32:90.30:0,90,2252	0/0:18,0:14:36.11:0,36,892	0/0:33,0:33:96.29:0,96,2349	0/0:31,0:31:87.28:0,87,2161	0/0:12,0:11:21.07:0,21,450	0/0:33,0:33:90.30:0,90,2311	0/1:50,0:37:99:348,0,589	0/0:46,0:46:99:0,138,3391	0/1:11,0:10:49.81:50,0,96
chr10	101778521	.	ATATGTATGTATGTATG	A	734.53	PASS	AB=0.959;AC=11;AF=0.212;AN=52;BaseQRankSum=6.035;DP=714;FS=5.106;HRun=0;HaplotypeScore=255.1980;InbreedingCoeff=0.3671;MQ=50.67;MQ0=28;MQRankSum=-2.320;QD=5.97;ReadPosRankSum=-3.051;VQSLOD=1.6316;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:5:0.94:2,1,0	1/1:4,0:5:0.47:1,0,0	0/0:11,0:2:6.02:0,6,273	./.	./.	0/0:19,0:17:27.09:0,27,1412	0/0:15,0:13:27.84:0,28,1448	0/0:42,0:28:81.28:0,81,4182	0/0:41,0:32:57.20:0,57,3686	0/0:50,0:50:99:0,120,7771	0/0:29,0:29:69.24:0,69,4336	0/0:14,0:9:2.09:0,2,125	0/0:13,0:6:12.04:0,12,394	0/0:38,0:29:63.22:0,63,4239	0/0:51,0:43:95.49:0,95,6443	0/0:10,0:6:8.96:0,9,211	0/0:27,0:25:18.17:0,18,1652	0/0:15,0:14:24.08:0,24,1289	0/0:19,0:10:27.08:0,27,1280	0/0:45,4:49:99:0,108,6222	0/0:31,0:29:71.72:0,72,3938	0/0:45,3:47:4.48:0,4,4082	0/1:31,5:36:75.46:75,0,3943	0/1:18,0:15:72.64:73,0,1041	0/1:35,0:35:99:119,0,4050	1/1:10,0:7:15.05:525,15,0	0/0:40,0:38:35.85:0,36,5948	1/1:6,0:5:2.84:68,3,0
chr10	101778539	.	ATGTATGTATGTATATC	A	937.83	PASS	AB=0.915;AC=8;AF=0.148;AN=54;BaseQRankSum=7.403;DP=706;FS=2.780;HRun=0;HaplotypeScore=241.9627;InbreedingCoeff=0.1021;MQ=49.96;MQ0=12;MQRankSum=-4.576;QD=10.19;ReadPosRankSum=-5.092;VQSLOD=0.9363;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:8:0.94:2,1,0	1/1:8,0:8:0.47:1,0,0	0/0:11,0:3:9.03:0,9,416	./.	0/0:42,0:41:3.10:0,3,9	0/0:13,0:11:30.10:0,30,1573	0/0:14,0:12:27.76:0,28,1615	0/0:45,0:44:46.44:0,46,5421	0/0:40,0:33:90.31:0,90,5259	0/0:46,0:46:99:0,138,8518	0/0:25,0:25:72.25:0,72,4504	0/0:18,0:12:2.37:0,2,79	0/1:19,0:14:25.47:25,0,238	0/0:39,0:30:81.26:0,81,5163	0/0:46,0:40:99:0,102,6534	0/0:14,0:9:14.90:0,15,144	0/0:20,0:19:13.75:0,14,1665	0/1:15,0:14:50.66:51,0,944	0/0:15,0:10:30.09:0,30,1446	0/0:47,0:47:99:0,129,7445	0/0:29,0:27:77.77:0,78,4396	0/0:31,0:30:52.99:0,53,4320	0/0:32,0:32:29.04:0,29,4300	0/0:14,0:11:3.41:0,3,1004	0/0:26,0:26:31.28:0,31,4283	0/1:24,4:22:99:871,0,246	0/0:38,0:37:90.12:0,90,6466	0/1:4,0:4:40.11:97,0,40
chr10	101778543	.	ATGTATGTATATCTATC	A	611.89	PASS	AB=0.949;AC=5;AF=0.089;AN=56;BaseQRankSum=5.208;DP=729;FS=1.079;HRun=0;HaplotypeScore=250.2024;InbreedingCoeff=0.0327;MQ=50.39;MQ0=10;MQRankSum=-4.480;QD=8.27;ReadPosRankSum=-1.012;VQSLOD=2.1116;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,1:10:2.20:0,2,19	1/1:8,1:8:0.47:1,0,0	0/0:10,0:3:9.03:0,9,412	0/0:9,0:2:2.97:0,3,20	0/0:14,32:44:6.29:0,6,111	0/0:12,0:10:27.09:0,27,1514	0/0:13,0:12:27.75:0,28,1617	0/0:47,0:46:99:0,128,5418	0/0:40,0:33:93.31:0,93,5579	0/0:46,0:45:99:0,135,8386	0/0:24,0:24:72.23:0,72,4359	0/0:18,4:15:2.53:0,3,51	0/1:24,0:17:21.10:21,0,203	0/0:39,0:32:87.30:0,87,5434	0/0:47,0:42:99:0,111,6419	0/0:12,2:8:6.02:0,6,114	0/0:19,0:18:10.14:0,10,1675	0/0:17,0:16:20.90:0,21,869	0/0:15,0:10:30.10:0,30,1546	0/0:46,0:46:99:0,123,7205	0/0:29,0:26:75.26:0,75,4364	0/0:32,0:31:84.29:0,84,4506	0/0:32,0:32:64.89:0,65,4563	0/0:13,0:10:18.90:0,19,928	0/0:24,0:24:72.25:0,72,4467	0/1:33,0:27:99:630,0,603	0/0:40,0:38:99:0,117,6784	0/1:6,0:6:58.51:59,0,89
chr10	101778551	.	ATATC	A	1451.60	PASS	AB=0.926;AC=9;AF=0.161;AN=56;BaseQRankSum=8.300;DP=793;FS=1.222;HRun=0;HaplotypeScore=134.2280;InbreedingCoeff=0.0299;MQ=49.75;MQ0=10;MQRankSum=-6.264;QD=5.74;ReadPosRankSum=-5.342;VQSLOD=0.5056;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:11:0.22:0,0,0	1/1:11,0:12:2.70:47,3,0	0/0:9,0:3:6.02:0,6,92	0/0:8,0:2:2.98:0,3,21	0/1:54,0:51:85.57:86,0,132	0/0:12,0:11:27.09:0,27,541	0/0:13,0:12:17.69:0,18,398	0/1:40,10:50:99:255,0,1386	0/0:40,0:34:93.30:0,93,1889	0/0:49,0:48:99:0,126,2774	0/0:25,0:25:52.72:0,53,1167	0/0:24,0:18:2.43:0,2,34	0/1:33,0:30:60.59:96,0,61	0/0:38,0:33:87.28:0,87,1831	0/0:46,0:41:81.75:0,82,1786	0/0:21,0:16:5.91:0,6,38	0/0:22,0:21:30.03:0,30,547	0/1:19,5:23:92.82:256,0,93	0/0:12,0:8:24.08:0,24,505	0/0:49,0:49:99:0,111,2296	0/0:28,0:26:57.20:0,57,1231	0/0:33,0:32:69.20:0,69,1335	0/0:31,0:31:66.23:0,66,1431	0/0:12,0:10:12.03:0,12,223	0/0:26,0:26:66.22:0,66,1365	0/1:43,0:37:99:720,0,384	0/0:40,0:38:99:0,111,2255	0/1:7,0:7:33.91:121,0,34
chr10	101778642	.	A	ATATG	4247.84	PASS	AB=0.850;AC=44;AF=0.846;AN=52;BaseQRankSum=0.200;DP=697;FS=38.510;HRun=0;HaplotypeScore=86.4919;InbreedingCoeff=0.2979;MQ=43.01;MQ0=47;MQRankSum=1.127;QD=7.47;ReadPosRankSum=-3.928;VQSLOD=0.5452;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,2:13:1.60:21,2,0	1/1:9,3:12:8.12:268,8,0	./.	./.	1/1:32,10:32:5.91:152,6,0	1/1:2,14:12:3.01:76,3,0	1/1:2,5:5:3.01:76,3,0	1/1:26,0:13:2.99:24,3,0	1/1:6,18:13:3.01:76,3,0	0/0:60,0:59:99:0,148,2546	0/0:37,0:37:99:0,99,1673	1/1:33,12:33:11.83:151,12,0	1/1:31,15:31:14.94:331,15,0	1/1:6,20:15:3.01:76,3,0	1/1:9,32:24:3.01:76,3,0	1/1:30,16:31:2.98:22,3,0	1/1:9,2:11:5.68:105,6,0	0/0:16,0:16:8.98:0,9,95	1/1:4,11:8:18.06:436,18,0	1/1:7,8:14:3.01:76,3,0	1/1:2,20:22:3.01:76,3,0	1/1:8,8:17:12.04:305,12,0	1/1:5,8:14:6.02:152,6,0	1/1:4,2:6:6.02:136,6,0	1/1:15,3:18:30.09:591,30,0	0/1:44,9:42:99:378,0,308	1/1:9,16:25:21.07:515,21,0	0/1:10,2:10:90.90:128,0,91
chr10	101778706	.	ATGTATG	A	118.36	PASS	AB=0.938;AC=6;AF=0.111;AN=54;BaseQRankSum=4.413;DP=596;FS=6.647;HRun=0;HaplotypeScore=113.1346;InbreedingCoeff=0.2839;MQ=48.85;MQ0=37;MQRankSum=-3.811;QD=1.52;ReadPosRankSum=-0.196;VQSLOD=1.8034;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,1:13:4.20:0,4,17	0/0:2,0:2:0:0,0,0	0/0:6,0:1:3.01:0,3,95	0/0:11,0:1:3.01:0,3,35	./.	0/0:10,0:10:24.08:0,24,813	0/0:10,0:8:21.07:0,21,726	0/0:64,0:40:99:0,117,3352	0/0:21,0:19:45.15:0,45,1587	0/0:56,0:55:99:0,166,5356	0/0:35,0:35:99:0,99,3336	1/1:22,0:19:0.80:2,1,0	0/1:15,0:10:0:0,0,0	0/0:25,0:23:57.20:0,57,1990	0/0:35,0:32:66.23:0,66,2279	0/1:15,0:10:0:0,0,0	0/0:30,0:26:44.58:0,45,1479	0/1:9,1:10:10.88:11,0,142	0/0:14,0:9:27.06:0,27,764	0/0:32,0:32:87.30:0,87,3054	0/0:19,0:18:39.13:0,39,1397	0/0:31,0:31:81.28:0,81,2762	0/0:32,0:32:81.28:0,81,2854	0/0:11,0:10:15.05:0,15,518	0/0:22,0:22:39.13:0,39,1327	0/1:13,3:11:99:189,0,335	0/0:34,0:33:81.28:0,81,2654	0/0:2,0:1:3.01:0,3,66
chr10	101778712	.	GTA	G	30.35	PASS	AB=0.810;AC=3;AF=0.060;AN=50;BaseQRankSum=4.446;DP=606;FS=9.006;HRun=0;HaplotypeScore=82.4041;InbreedingCoeff=0.1084;MQ=49.71;MQ0=32;MQRankSum=-3.974;QD=0.69;ReadPosRankSum=0.313;VQSLOD=0.8847;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,2:13:3.54:0,4,14	0/0:3,0:3:2.04:0,2,6	0/0:5,0:1:3.01:0,3,45	0/0:11,0:1:3:0,3,26	./.	0/0:11,0:11:27.09:0,27,444	0/0:11,0:9:24.08:0,24,400	0/0:63,0:42:99:0,120,1780	0/0:21,0:19:51.16:0,51,874	0/0:54,0:54:99:0,153,2502	0/0:34,0:34:99:0,99,1653	0/1:11,7:15:0:0,0,0	./.	0/0:25,0:23:60.21:0,60,1080	0/0:38,0:35:75.24:0,75,1287	./.	0/0:32,1:30:50.23:0,50,844	0/1:7,3:10:61.60:62,0,66	0/0:13,0:8:21.07:0,21,347	0/0:34,0:34:93.30:0,93,1634	0/0:18,0:17:42.12:0,42,718	0/0:33,0:33:87.30:0,87,1509	0/0:34,0:34:87.30:0,87,1536	0/0:12,0:11:18.06:0,18,275	0/0:24,0:24:39.13:0,39,541	0/1:15,1:11:55.27:55,0,85	0/0:37,0:36:90.31:0,90,1554	0/0:2,0:1:2.99:0,3,24
chr10	101778714	.	A	ATATC	642.11	PASS	AB=0.918;AC=10;AF=0.227;AN=44;BaseQRankSum=1.894;DP=618;FS=6.203;HRun=0;HaplotypeScore=104.2336;InbreedingCoeff=0.6067;MQ=49.75;MQ0=31;MQRankSum=-2.937;QD=5.31;ReadPosRankSum=-0.459;VQSLOD=1.4337;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:17:2.98:22,3,0	./.	./.	./.	./.	0/0:11,0:11:24.08:0,24,372	0/0:10,0:9:14.56:0,15,233	0/0:62,0:42:33.08:0,33,461	0/0:20,0:19:42.11:0,42,630	0/0:53,0:53:81.27:0,81,1250	0/0:33,0:34:63.21:0,63,974	0/1:17,0:16:0.02:0,0,0	0/1:17,0:13:0:0,0,0	0/0:25,0:23:51.17:0,51,795	0/0:34,0:33:69.22:0,69,1039	./.	0/0:31,0:31:41.80:0,42,592	0/1:9,0:10:6.83:50,0,7	0/0:12,0:7:6.02:0,6,94	0/0:36,0:35:81.23:0,81,1202	0/0:19,0:18:33.09:0,33,487	0/0:34,0:34:69.20:0,69,989	0/0:36,0:36:75.24:0,75,1152	0/1:10,0:11:12.98:13,0,128	1/1:8,16:25:21.07:499,21,0	1/1:19,0:15:23.77:191,24,0	0/0:37,0:36:72.24:0,72,1106	./.
chr10	101778767	.	GTA	G	246.56	PASS	AB=0.674;AC=6;AF=0.111;AN=54;BaseQRankSum=6.872;DP=744;FS=3.313;HRun=0;HaplotypeScore=107.4624;InbreedingCoeff=0.1766;MQ=49.94;MQ0=29;MQRankSum=-5.083;QD=2.77;ReadPosRankSum=2.902;VQSLOD=2.2611;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,5:22:4.85:0,5,60	0/1:2,8:10:18.97:19,0,24	0/0:12,0:1:3.01:0,3,31	./.	0/1:17,14:30:0.60:1,0,237	0/0:20,0:20:60.19:0,60,1060	0/0:14,0:14:39.11:0,39,628	0/0:53,0:49:99:0,138,2268	0/0:28,0:27:75.21:0,75,1292	0/0:47,0:47:99:0,138,2365	0/0:27,0:27:72.23:0,72,1228	0/0:25,7:24:15.03:0,15,150	0/0:17,10:22:18.04:0,18,181	0/0:28,0:27:72.25:0,72,1280	0/0:43,0:36:99:0,102,1849	0/0:18,7:17:9.02:0,9,90	0/0:29,1:27:51.07:0,51,895	0/1:6,2:7:17.74:20,0,18	0/0:16,0:6:18.06:0,18,330	0/0:49,0:49:99:0,144,2447	0/0:24,0:24:72.25:0,72,1230	0/0:34,0:34:93.32:0,93,1656	0/0:36,0:36:96.23:0,96,1531	0/0:13,0:12:24.08:0,24,421	0/0:27,0:27:60.17:0,60,982	0/1:15,17:23:99:248,0,155	0/0:39,0:39:99:0,114,1965	1/1:4,4:4:6.02:71,6,0
chr10	101778773	.	CTA	C	236.84	PASS	AB=0.682;AC=6;AF=0.111;AN=54;BaseQRankSum=6.130;DP=751;FS=2.107;HRun=0;HaplotypeScore=110.2234;InbreedingCoeff=0.1613;MQ=50.06;MQ0=25;MQRankSum=-4.392;QD=2.60;ReadPosRankSum=3.694;VQSLOD=1.9570;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,4:24:8.79:0,9,162	0/1:2,8:10:21.93:22,0,53	0/0:11,0:1:3.01:0,3,31	./.	0/1:20,14:32:0.49:0,0,526	0/0:19,0:19:57.20:0,57,1100	0/0:13,0:13:39.13:0,39,753	0/0:58,0:55:99:0,166,2900	0/0:27,0:26:75.24:0,75,1359	0/0:47,0:47:99:0,136,2509	0/0:26,0:26:75.23:0,75,1352	0/0:26,7:24:14.87:0,15,290	0/0:15,10:20:21.07:0,21,396	0/0:30,0:29:78.23:0,78,1404	0/0:44,0:37:99:0,108,2067	0/0:20,7:19:12.04:0,12,220	0/0:30,1:28:60.08:0,60,1030	0/1:7,2:8:20.29:20,0,61	0/0:17,0:9:27.08:0,27,485	0/0:52,0:52:99:0,153,2770	0/0:26,0:26:78.21:0,78,1356	0/0:31,0:31:90.31:0,90,1707	0/0:28,0:28:84.29:0,84,1606	0/0:17,0:16:33.10:0,33,550	0/0:28,0:28:63.19:0,63,1146	0/1:14,17:22:99:269,0,257	0/0:38,0:38:99:0,114,2077	1/1:3,4:4:4.25:37,4,0
chr10	101778790	.	ATATG	A	1951.67	PASS	AB=0.701;AC=13;AF=0.250;AN=52;BaseQRankSum=10.484;DP=769;FS=9.242;HRun=0;HaplotypeScore=135.5150;InbreedingCoeff=0.4576;MQ=49.89;MQ0=26;MQRankSum=-0.617;QD=8.87;ReadPosRankSum=-0.467;VQSLOD=2.3881;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,8:25:7.81:148,8,0	0/1:6,2:11:32.99:44,0,33	./.	./.	0/1:8,19:32:41.62:369,0,42	0/0:18,0:18:51.16:0,51,1183	0/0:18,0:18:45.15:0,45,973	0/0:51,0:48:99:0,111,2185	0/0:25,0:23:63.19:0,63,1355	0/0:38,0:38:93.32:0,93,2103	0/0:21,0:21:60.19:0,60,1406	1/1:14,14:23:18.06:300,18,0	1/1:13,15:24:21.05:350,21,0	0/0:30,0:29:63.22:0,63,1480	0/0:46,0:39:90.26:0,90,2033	1/1:9,13:23:12.01:200,12,0	0/0:29,0:28:32.74:0,33,596	0/1:3,3:5:45.60:46,0,55	0/0:17,0:10:27.09:0,27,629	0/0:51,0:51:99:0,123,2808	0/0:29,0:29:75.24:0,75,1675	0/0:32,0:32:69.24:0,69,1553	0/0:43,0:43:99:0,105,2344	0/0:14,0:13:27.05:0,27,612	0/0:33,0:33:72.22:0,72,1624	0/1:17,20:27:99:554,0,370	0/0:41,0:41:93.28:0,93,2131	0/1:7,5:9:61.79:110,0,62
chr10	101778879	.	TGTAA	T	1562.06	PASS	AB=0.997;AC=11;AF=0.196;AN=56;BaseQRankSum=12.741;DP=854;FS=9.497;HRun=0;HaplotypeScore=214.0267;InbreedingCoeff=0.0380;MQ=52.90;MQ0=4;MQRankSum=0.544;QD=5.09;ReadPosRankSum=5.022;VQSLOD=1.3866;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:34.06:34,0,39	0/1:25,0:24:48.52:49,0,245	0/0:11,0:2:3.01:0,3,72	0/1:4,0:1:0:0,0,0	0/1:52,0:49:99:165,0,206	0/0:17,0:17:51.16:0,51,1392	0/0:19,0:18:51.13:0,51,1045	0/0:53,0:53:99:0,159,3634	0/0:29,0:28:84.25:0,84,2088	0/0:52,0:52:99:0,147,3466	0/0:36,0:36:99:0,108,2623	0/1:35,0:30:99:112,0,155	0/1:48,0:44:99:298,0,258	0/0:32,0:32:95.33:0,95,2424	0/0:37,0:37:84.35:0,84,2452	0/1:42,1:35:70.31:181,0,70	0/0:23,0:22:54.06:0,54,1121	0/1:11,0:11:21.77:132,0,22	0/0:20,0:19:57.15:0,57,1222	0/0:37,0:37:99:0,111,2750	0/0:29,0:29:84.24:0,84,1899	0/0:42,0:42:99:0,126,2876	0/0:25,0:25:75.14:0,75,1842	0/0:14,0:13:36.74:0,37,868	0/0:39,0:38:99:0,111,2573	0/1:45,0:37:99:478,0,161	0/0:32,0:30:89.31:0,89,2202	1/1:16,4:19:15.72:262,16,0
chr10	101778883	.	A	AATCT	2937.12	PASS	AB=0.950;AC=8;AF=0.154;AN=52;BaseQRankSum=9.743;DP=856;FS=15.361;HRun=0;HaplotypeScore=210.3263;InbreedingCoeff=0.2181;MQ=52.94;MQ0=3;MQRankSum=0.619;QD=12.04;ReadPosRankSum=2.339;VQSLOD=2.2074;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,3:26:14.64:273,15,0	0/1:25,1:25:99:209,0,152	./.	./.	0/1:49,3:49:99:664,0,127	0/0:19,0:19:45.15:0,45,746	0/0:19,0:18:39.12:0,39,626	0/0:55,0:55:81.27:0,81,1311	0/0:28,0:28:72.25:0,72,1196	0/0:49,0:49:99:0,108,1775	0/0:37,0:37:81.26:0,81,1314	0/1:36,1:31:98.10:492,0,98	0/1:47,2:44:99:795,0,149	0/0:35,0:35:84.27:0,84,1349	0/0:36,0:36:93.31:0,93,1539	0/1:39,3:34:0.21:625,0,0	0/0:23,0:22:29.29:0,29,419	0/1:11,0:12:16.24:16,0,207	0/0:20,0:19:45.15:0,45,749	0/0:35,0:35:75.26:0,75,1239	0/0:24,0:24:54.16:0,54,872	0/0:42,0:42:99:0,102,1686	0/0:25,0:25:54.18:0,54,889	0/0:15,0:14:33.11:0,33,546	0/0:37,0:36:81.28:0,81,1339	0/0:46,0:38:71.03:0,71,1194	0/0:33,0:31:60.19:0,60,974	0/0:19,0:19:26.88:0,27,415
chr10	101778995	.	A	ATATC	1435.30	PASS	AB=0.909;AC=6;AF=0.115;AN=52;BaseQRankSum=3.017;DP=791;FS=0.000;HRun=0;HaplotypeScore=145.4462;InbreedingCoeff=0.5187;MQ=54.47;MQ0=19;MQRankSum=-1.940;QD=15.77;ReadPosRankSum=0.352;VQSLOD=3.2650;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:36:30.04:0,30,461	0/0:22,0:22:27.07:0,27,397	./.	./.	0/0:38,0:37:42.10:0,42,597	0/0:26,0:27:51.10:0,51,676	0/0:14,0:13:27.06:0,27,363	0/0:50,0:46:26.98:0,27,256	0/0:35,0:35:60.19:0,60,890	0/0:51,0:51:84.26:0,84,1241	0/0:22,0:23:30.09:0,30,434	0/0:33,0:31:28.54:0,29,432	0/0:41,0:40:59.76:0,60,918	0/0:35,0:35:69.20:0,69,1008	0/0:28,0:29:48.13:0,48,650	0/0:39,0:34:45.12:0,45,662	0/1:15,0:14:7.62:8,0,166	1/1:13,0:14:0.89:2,1,0	0/0:22,0:21:27.09:0,27,410	0/0:27,0:28:48.08:0,48,630	0/0:18,0:18:24.06:0,24,343	0/0:22,0:22:39.09:0,39,549	0/0:31,0:31:51.13:0,51,761	0/0:17,0:17:17.99:0,18,241	0/0:26,0:25:42.12:0,42,597	1/1:36,8:38:54.65:1126,55,0	0/0:35,0:35:57.08:0,57,761	0/1:14,4:17:16.54:412,0,17
chr10	101780250	.	T	TA	6480.40	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.472;DP=581;FS=3.570;HRun=1;HaplotypeScore=66.4548;InbreedingCoeff=0.9963;MQ=99.62;MQ0=0;MQRankSum=-2.934;QD=39.04;ReadPosRankSum=3.583;VQSLOD=5.6281;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:69.23:1034,69,0	1/1:0,8:8:21.03:290,21,0	0/0:33,0:33:84.17:0,84,1031	0/0:28,0:28:70.23:0,70,885	1/1:0,30:30:90.30:1349,90,0	0/0:25,0:25:75.24:0,75,973	0/0:8,0:8:24.08:0,24,312	0/0:36,0:36:96.30:0,96,1233	0/0:18,0:18:54.18:0,54,701	0/0:24,0:24:63.20:0,63,806	0/0:21,0:21:60.16:0,60,761	1/1:1,10:11:27.09:405,27,0	1/1:0,23:23:66.22:989,66,0	0/0:16,0:16:48.16:0,48,623	0/0:20,0:20:60.20:0,60,779	1/1:0,21:21:51.17:765,51,0	0/0:20,0:20:60.19:0,60,772	1/1:0,9:9:18.06:270,18,0	0/0:21,0:21:60.19:0,60,779	0/0:29,0:29:87.27:0,87,1115	0/0:11,0:11:33.11:0,33,428	0/0:21,0:21:63.20:0,63,818	0/0:23,0:23:66.21:0,66,856	0/0:24,0:24:69.22:0,69,892	0/0:19,0:19:57.19:0,57,739	1/1:2,26:28:42.30:1110,42,0	0/0:18,0:18:51.17:0,51,661	1/1:0,6:6:18.06:270,18,0
chr10	101780904	.	CT	C	5016.76	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.886;DP=570;FS=3.727;HRun=2;HaplotypeScore=62.8464;InbreedingCoeff=0.9969;MQ=87.15;MQ0=0;MQRankSum=-1.729;QD=33.45;ReadPosRankSum=4.220;VQSLOD=4.9944;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:48.15:619,48,0	1/1:0,13:13:36.12:467,36,0	0/0:19,0:19:54.18:0,54,794	0/0:21,0:21:63.17:0,63,893	1/1:0,20:20:45.15:584,45,0	0/0:27,0:27:78.25:0,78,1149	0/0:16,0:16:48.15:0,48,701	0/0:40,0:40:99:0,117,1735	0/0:17,0:17:51.17:0,51,764	0/0:20,0:20:60.20:0,60,900	0/0:23,0:23:69.21:0,69,1008	1/1:0,14:14:39.13:502,39,0	1/1:0,16:16:42.14:545,42,0	0/0:28,0:28:84.28:0,84,1257	0/0:30,0:30:90.30:0,90,1347	1/1:0,21:21:63.20:818,63,0	0/0:10,0:10:30.10:0,30,449	1/1:1,9:10:27.09:348,27,0	0/0:17,1:18:15.37:0,15,708	0/0:28,0:28:84.26:0,84,1220	0/0:31,0:31:90.28:0,90,1309	0/0:12,0:12:36.12:0,36,538	0/0:23,0:23:69.23:0,69,1033	0/0:13,0:13:36.12:0,36,540	0/0:21,0:21:60.20:0,60,899	1/1:1,23:24:27.22:822,27,0	0/0:23,0:23:69.23:0,69,1016	1/1:0,13:13:24.08:311,24,0
chr10	101781025	.	A	AT	818.42	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.782;DP=540;FS=4.475;HRun=8;HaplotypeScore=83.2923;InbreedingCoeff=0.9204;MQ=71.61;MQ0=0;MQRankSum=-2.279;QD=20.99;ReadPosRankSum=-0.164;VQSLOD=3.5957;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:30.01:0,30,274	0/0:10,0:10:21.01:0,21,192	0/0:12,0:12:26.99:0,27,241	0/0:5,0:5:14.92:0,15,120	0/0:37,0:37:92.96:0,93,838	0/0:21,0:20:57.01:0,57,516	0/0:12,0:12:26.75:0,27,231	0/0:36,0:36:90.01:0,90,815	0/0:14,0:14:33.01:0,33,302	0/0:27,0:27:35.45:0,35,497	0/0:27,0:27:75.02:0,75,683	0/0:13,0:13:36.02:0,36,327	0/0:14,0:14:39.01:0,39,356	0/0:20,0:20:29.42:0,29,433	0/0:22,0:22:63.03:0,63,573	0/0:23,0:23:69.04:0,69,631	0/0:10,0:10:30.02:0,30,275	0/0:13,0:13:39.02:0,39,357	0/0:25,0:25:66:0,66,587	0/0:34,0:34:93.04:0,93,851	0/0:13,0:13:29.95:0,30,263	0/0:17,0:17:51.01:0,51,459	0/0:19,0:19:57:0,57,512	0/0:10,0:10:27.01:0,27,247	0/0:25,0:25:66.02:0,66,601	1/1:10,18:28:5.20:549,5,0	0/0:30,0:30:80.99:0,81,728	1/1:0,11:11:33.10:381,33,0
chr10	101781267	.	TCACA	T	1547.07	PASS	AB=0.900;AC=15;AF=0.268;AN=56;BaseQRankSum=12.309;DP=641;FS=6.026;HRun=0;HaplotypeScore=143.1879;InbreedingCoeff=0.8369;MQ=65.02;MQ0=5;MQRankSum=-5.320;QD=10.31;ReadPosRankSum=0.329;VQSLOD=2.7152;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,3:13:12.38:134,12,0	1/1:6,2:8:11.98:99,12,0	0/0:30,0:18:28.69:0,29,328	0/0:16,0:12:29.79:0,30,292	1/1:3,20:23:6.02:85,6,0	0/0:31,0:31:87.14:0,87,1667	0/0:14,0:14:42.12:0,42,902	0/0:36,0:36:96.11:0,96,1323	0/0:33,0:33:87.22:0,87,1816	0/0:29,0:29:72.19:0,72,1397	0/0:16,0:16:44.75:0,45,970	1/1:15,8:23:42.54:506,43,0	1/1:22,5:27:11.82:120,12,0	0/0:26,0:26:47.15:0,47,1280	0/0:26,0:26:72.13:0,72,1464	1/1:12,9:21:44.99:491,45,0	0/0:17,0:17:42.03:0,42,847	1/1:2,15:17:9.03:157,9,0	0/0:23,0:23:63.06:0,63,1024	0/0:31,0:31:90.07:0,90,1766	0/0:45,0:45:99:0,117,2517	0/0:16,0:16:45.10:0,45,992	0/0:18,0:18:47.08:0,47,795	0/0:22,0:22:62.82:0,63,1323	0/0:23,0:23:69.16:0,69,1426	0/1:16,2:18:58.89:144,0,59	0/0:34,0:34:99:0,99,2264	0/0:5,0:5:0.47:0,0,1
chr10	101781288	.	CATACATACATACATAA	C	4112.98	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=9.992;DP=667;FS=0.000;HRun=0;HaplotypeScore=273.0238;InbreedingCoeff=0.6604;MQ=53.56;MQ0=12;MQRankSum=-9.198;QD=29.17;ReadPosRankSum=0.026;VQSLOD=2.3822;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:12.12:290,0,12	0/1:8,0:8:2.96:3,0,96	0/0:29,0:4:5.34:0,5,28	0/0:27,0:8:9.92:0,10,242	1/1:24,0:24:17.44:443,17,0	0/0:26,0:26:66.17:0,66,3717	0/0:16,0:16:42.08:0,42,1730	0/0:41,0:39:78.26:0,78,2569	0/0:28,0:28:69.23:0,69,4337	0/0:30,0:30:69.20:0,69,3830	0/0:17,0:17:50.37:0,50,2774	1/1:23,0:23:29.57:1175,30,0	1/1:11,18:29:15.52:540,16,0	0/0:24,0:24:48.10:0,48,2158	0/0:25,0:25:63.22:0,63,3936	1/1:20,0:20:30.09:1108,30,0	0/0:14,0:14:36.12:0,36,2166	0/0:22,0:22:28.41:0,28,697	0/0:27,0:26:54.79:0,55,2722	0/0:33,0:33:84.29:0,84,4896	0/0:42,0:42:99:0,117,6415	0/0:21,0:21:57.20:0,57,3043	0/0:16,0:16:39.13:0,39,1958	0/0:21,0:21:54.17:0,54,3373	0/0:23,0:23:60.21:0,60,3077	0/1:23,0:23:99:554,0,177	0/0:38,0:38:99:0,105,5961	./.
chr10	101781292	.	CATACATACATAA	C	2958.67	PASS	AB=1.000;AC=14;AF=0.259;AN=54;BaseQRankSum=10.538;DP=674;FS=2.325;HRun=0;HaplotypeScore=229.5170;InbreedingCoeff=0.7279;MQ=53.86;MQ0=15;MQRankSum=-7.850;QD=18.38;ReadPosRankSum=-1.992;VQSLOD=2.6158;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,3:15:11.60:250,12,0	1/1:8,0:8:8.88:80,9,0	0/0:30,0:4:0.71:0,1,18	0/0:31,0:7:5.62:0,6,152	1/1:14,6:20:23.52:318,24,0	0/0:25,0:25:67.03:0,67,2842	0/0:14,0:14:42.05:0,42,1271	0/0:38,0:36:81.21:0,81,1737	0/0:29,0:29:72.23:0,72,3414	0/0:31,0:31:78.20:0,78,3049	0/0:20,0:20:56.73:0,57,2240	1/1:15,8:23:39.08:918,39,0	1/1:24,4:29:15.52:380,16,0	0/0:22,0:22:51.10:0,51,1685	0/0:26,0:26:66.20:0,66,3046	1/1:13,9:22:36.10:892,36,0	0/0:14,0:14:29.05:0,29,1638	0/1:21,0:21:60.91:61,0,346	0/0:31,0:30:61.98:0,62,2148	0/0:33,0:33:87.26:0,87,3791	0/0:44,0:44:99:0,126,5143	0/0:22,0:22:60.19:0,60,2325	0/0:15,0:15:39.12:0,39,1534	0/0:20,0:20:54.16:0,54,2610	0/0:23,0:23:63.17:0,63,2280	0/1:23,0:23:99:242,0,194	0/0:38,0:38:99:0,105,4511	./.
chr10	101782107	.	T	TA	7534.69	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=17.754;DP=742;FS=17.549;HRun=5;HaplotypeScore=82.5456;InbreedingCoeff=0.9997;MQ=83.13;MQ0=1;MQRankSum=-3.418;QD=33.34;ReadPosRankSum=1.707;VQSLOD=3.2620;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:34:87.28:1145,87,0	1/1:0,11:11:33.11:434,33,0	0/0:23,0:23:66.15:0,66,695	0/0:23,0:23:51.86:0,52,540	1/1:3,31:34:87.20:1106,87,0	0/0:26,0:26:69.17:0,69,742	0/0:17,0:17:51.13:0,51,548	0/0:25,0:25:69.17:0,69,735	0/0:23,0:23:60.13:0,60,637	0/0:39,0:38:99:0,111,1181	0/0:27,0:27:81.20:0,81,870	1/1:2,25:27:69.22:905,69,0	1/1:4,39:43:99:1382,105,0	0/0:23,0:23:66.16:0,66,709	0/0:25,0:25:69.17:0,69,742	1/1:3,25:28:42.99:915,43,0	0/0:31,0:31:87.22:0,87,935	1/1:0,13:13:33.11:434,33,0	0/0:19,0:19:45.11:0,45,484	0/0:33,0:33:93.19:0,93,975	0/0:35,0:35:99:0,102,1088	0/0:26,0:26:72.18:0,72,774	0/0:30,0:30:84.21:0,84,903	0/0:22,0:22:60.15:0,60,645	0/0:36,0:36:99:0,108,1153	1/1:4,23:27:39.96:859,40,0	0/0:33,0:33:93.23:0,93,1000	1/1:0,9:9:27.09:355,27,0
chr10	101783066	.	TG	T	7014.44	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=18.244;DP=696;FS=10.058;HRun=2;HaplotypeScore=84.8164;InbreedingCoeff=0.9991;MQ=96.14;MQ0=0;MQRankSum=-4.792;QD=36.72;ReadPosRankSum=1.664;VQSLOD=4.9183;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:42:99:1441,111,0	1/1:0,11:11:30.10:390,30,0	0/0:35,0:35:95.42:0,95,1388	0/0:31,0:31:90.29:0,90,1298	1/1:0,29:29:84.27:1090,84,0	0/0:24,0:24:72.23:0,72,1058	0/0:16,0:16:45.15:0,45,675	0/0:37,0:37:99:0,108,1599	0/0:36,0:36:99:0,105,1546	0/0:28,0:27:81.26:0,81,1180	0/0:28,0:28:84.27:0,84,1240	1/1:0,23:23:66.21:857,66,0	1/1:1,22:23:69.22:890,69,0	0/0:24,0:24:72.22:0,72,1041	0/0:26,0:26:78.26:0,78,1168	1/1:0,20:20:54.18:701,54,0	0/0:26,0:26:78.24:0,78,1128	1/1:0,9:9:27.09:349,27,0	0/0:20,0:20:60.19:0,60,879	0/0:32,0:32:96.31:0,96,1393	0/0:27,0:27:81.26:0,81,1192	0/0:27,0:27:81.27:0,81,1204	0/0:27,0:27:81.21:0,81,1150	0/0:21,0:21:57.18:0,57,831	0/0:20,0:20:60.20:0,60,899	1/1:0,27:27:81.24:1024,81,0	0/0:20,0:20:60.20:0,60,899	1/1:0,7:7:21.07:273,21,0
chr10	101783212	.	TCA	T	9144.90	PASS	AB=0.522;AC=17;AF=0.304;AN=56;BaseQRankSum=16.649;DP=762;FS=47.610;HRun=0;HaplotypeScore=89.3368;InbreedingCoeff=0.9289;MQ=87.06;MQ0=3;MQRankSum=-2.478;QD=37.02;ReadPosRankSum=5.889;VQSLOD=2.7428;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,42:44:99:1634,111,0	1/1:0,10:9:27.09:397,27,0	0/0:32,0:31:89.08:0,89,1488	0/0:21,0:21:49.96:0,50,923	1/1:0,31:31:87.29:1280,87,0	0/0:31,0:31:84.29:0,84,1564	0/0:21,0:21:57.16:0,57,995	0/0:40,0:40:99:0,114,2090	0/0:34,0:34:99:0,102,1878	0/0:34,0:34:99:0,99,1848	0/0:17,0:17:51.17:0,51,948	1/1:1,28:29:66.22:972,66,0	1/1:4,36:39:93.31:1368,93,0	0/0:30,0:30:87.30:0,87,1614	0/0:41,0:41:99:0,120,2207	1/1:2,30:32:84.28:1237,84,0	0/0:33,0:33:96.31:0,96,1764	1/1:1,16:17:42.14:618,42,0	0/0:15,0:15:45.15:0,45,830	0/0:17,0:17:48.16:0,48,882	0/0:27,0:27:81.26:0,81,1469	0/0:31,0:31:93.32:0,93,1726	0/0:21,0:21:63.20:0,63,1149	0/0:24,0:24:72.25:0,72,1336	0/0:25,0:25:72.25:0,72,1332	0/1:3,33:36:7.10:1329,0,7	0/0:21,0:21:63.22:0,63,1172	1/1:0,7:7:21.07:309,21,0
chr10	101783758	.	C	CAT	1805.99	PASS	AB=0.804;AC=6;AF=0.107;AN=56;BaseQRankSum=-3.295;DP=430;FS=0.591;HRun=0;HaplotypeScore=59.8231;InbreedingCoeff=0.6486;MQ=73.07;MQ0=5;MQRankSum=-1.025;QD=28.22;ReadPosRankSum=1.126;VQSLOD=4.4946;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:34.82:0,35,143	0/0:5,0:5:8.04:0,8,33	0/0:9,0:7:5.99:0,6,71	0/1:10,0:8:8.09:22,0,8	0/0:21,0:21:44.10:0,44,179	0/0:25,0:25:63.19:0,63,804	0/0:8,0:8:18.06:0,18,234	0/0:38,0:38:81.24:0,81,1027	0/0:11,0:11:27.09:0,27,350	0/0:20,0:20:54.16:0,54,679	0/0:21,0:21:57.14:0,57,694	0/0:6,0:6:13.08:0,13,52	0/0:10,0:9:18.75:0,19,77	0/0:12,0:12:33.11:0,33,429	0/0:14,0:14:39.13:0,39,507	0/0:9,0:9:10.71:0,11,44	0/0:23,0:23:54.17:0,54,702	0/1:6,11:17:2.09:497,0,2	0/0:16,0:16:42.12:0,42,523	0/0:19,0:19:51.17:0,51,661	0/0:5,0:5:9.03:0,9,117	0/0:7,0:7:12.03:0,12,142	0/0:7,0:7:18.05:0,18,219	0/0:5,0:5:12.04:0,12,156	0/0:40,0:40:77.34:0,77,1217	1/1:0,19:19:54.14:862,54,0	0/0:19,0:19:48.15:0,48,624	1/1:2,15:15:33.11:561,33,0
chr10	101783766	.	TAC	T	2066.85	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=7.129;DP=422;FS=1.153;HRun=0;HaplotypeScore=58.7925;InbreedingCoeff=0.8611;MQ=74.18;MQ0=5;MQRankSum=0.431;QD=26.50;ReadPosRankSum=2.945;VQSLOD=4.5940;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:39.13:595,39,0	1/1:0,5:5:9.03:137,9,0	0/0:10,1:7:11.79:0,12,111	0/0:12,0:9:4.36:0,4,39	1/1:1,21:22:51.17:779,51,0	0/0:23,0:23:69.20:0,69,1262	0/0:7,0:7:21.06:0,21,372	0/0:33,0:33:87.25:0,87,1525	0/0:11,0:11:33.08:0,33,560	0/0:19,0:19:57.18:0,57,1032	0/0:23,0:23:66.01:0,66,1053	1/1:0,5:5:15.05:229,15,0	1/1:0,8:7:21.07:321,21,0	0/0:12,0:12:36.11:0,36,651	0/0:13,0:13:39.12:0,39,719	1/1:2,7:9:12.04:183,12,0	0/0:21,0:21:60.19:0,60,1122	0/1:15,0:15:2.35:2,0,51	0/0:17,0:17:50.86:0,51,802	0/0:22,0:22:66.12:0,66,1039	0/0:4,0:4:9.03:0,9,174	0/0:5,0:5:15.02:0,15,222	0/0:8,0:8:24.02:0,24,319	0/0:5,0:5:12.04:0,12,231	0/0:41,0:41:95.31:0,95,1883	0/0:22,0:21:40.16:0,40,620	0/0:19,0:19:54.15:0,54,972	0/0:16,0:14:35.55:0,36,332
chr10	101784564	.	G	GACTC	7405.68	PASS	AB=0.583;AC=15;AF=0.278;AN=54;BaseQRankSum=14.825;DP=554;FS=10.619;HRun=0;HaplotypeScore=120.4323;InbreedingCoeff=0.9067;MQ=79.16;MQ0=0;MQRankSum=-14.954;QD=60.21;ReadPosRankSum=2.206;VQSLOD=6.5667;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:21:42.14:1121,42,0	1/1:0,10:10:30.10:817,30,0	0/0:17,0:17:41.61:0,42,754	0/0:13,0:13:29.77:0,30,472	1/1:4,20:25:48.16:1308,48,0	0/0:18,0:18:54.19:0,54,1045	0/0:25,0:25:75.23:0,75,1369	0/0:27,0:27:81.28:0,81,1568	0/0:25,0:25:72.23:0,72,1358	0/0:22,0:22:66.23:0,66,1279	0/0:20,0:20:60.19:0,60,1126	1/1:3,14:17:45.15:1142,45,0	1/1:7,9:16:33.11:832,33,0	0/0:22,0:22:63.22:0,63,1211	0/0:32,0:32:93.31:0,93,1770	1/1:3,12:15:30.10:809,30,0	0/0:45,0:45:99:0,132,2515	./.	0/0:18,0:18:51.17:0,51,936	0/0:28,0:28:75.26:0,75,1437	0/0:24,0:24:72.22:0,72,1333	0/0:22,0:22:60.21:0,60,1146	0/0:16,0:16:42.14:0,42,814	0/0:23,0:23:66.17:0,66,1195	0/0:13,0:13:33.11:0,33,623	0/1:4,10:14:16.03:967,0,16	0/0:20,0:20:57.20:0,57,1095	1/1:0,5:5:15.05:410,15,0
chr10	101785451	.	A	AAT	257.06	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=1.039;DP=432;FS=0.000;HRun=0;HaplotypeScore=57.8308;InbreedingCoeff=0.7181;MQ=60.41;MQ0=0;MQRankSum=-1.419;QD=28.56;ReadPosRankSum=0.689;VQSLOD=4.6416;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:51.10:0,51,611	0/0:9,0:9:24.05:0,24,287	./.	0/0:4,0:1:1.82:0,2,5	0/0:29,0:29:75.21:0,75,920	0/0:23,0:23:54.17:0,54,681	0/0:10,0:10:30.10:0,30,379	0/0:63,0:63:99:0,132,1614	0/0:5,0:5:12.04:0,12,151	0/0:22,0:22:60.18:0,60,738	0/0:20,0:20:42.13:0,42,530	0/0:10,0:10:18.06:0,18,227	0/0:15,0:15:42.12:0,42,519	0/0:5,0:5:15.04:0,15,176	0/0:14,0:14:36.12:0,36,454	0/0:12,0:12:36.11:0,36,444	0/0:21,0:21:51.16:0,51,643	1/1:1,8:9:21.07:349,21,0	0/0:13,0:13:33.10:0,33,407	0/0:20,0:20:54.17:0,54,681	0/0:10,0:10:30.08:0,30,364	0/0:4,0:4:12.04:0,12,151	0/0:13,0:13:30.08:0,30,364	0/0:1,0:1:3.01:0,3,38	0/0:26,0:26:69.18:0,69,818	0/0:18,0:18:54.16:0,54,670	0/0:26,0:26:69.22:0,69,871	0/0:10,0:10:30.06:0,30,362
chr10	101786629	.	GT	G	208.73	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.282;DP=792;FS=0.865;HRun=7;HaplotypeScore=113.9510;InbreedingCoeff=0.9906;MQ=85.89;MQ0=2;MQRankSum=-1.401;QD=18.98;ReadPosRankSum=-2.247;VQSLOD=2.2014;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,123,1507	0/0:17,0:17:51.12:0,51,607	0/0:60,2:42:28.59:0,29,662	0/0:80,0:53:36.03:0,36,707	0/0:32,0:32:90.28:0,90,1116	0/0:20,0:20:57.17:0,57,706	0/0:25,0:25:72.22:0,72,892	0/0:28,0:28:69.21:0,69,859	0/0:19,0:19:51.16:0,51,641	0/0:39,0:39:99:0,108,1347	0/0:30,0:30:90.26:0,90,1096	0/0:25,0:25:75.23:0,75,929	0/0:23,0:23:63.15:0,63,740	0/0:30,0:30:84.24:0,84,1030	0/0:23,0:23:66.18:0,66,794	0/0:19,0:19:51.14:0,51,606	0/0:23,0:23:69.10:0,69,813	1/1:3,8:11:30.06:303,30,0	0/0:15,0:15:42.12:0,42,506	0/0:20,0:20:54.15:0,54,654	0/0:13,0:13:39.11:0,39,477	0/0:29,0:29:81.26:0,81,1018	0/0:35,0:35:99:0,99,1219	0/0:32,0:32:90.29:0,90,1131	0/0:21,0:21:63.18:0,63,761	0/0:25,0:25:69.20:0,69,854	0/0:34,0:34:99:0,99,1215	0/0:10,0:10:18.06:0,18,226
chr10	101786646	.	CT	C	4876.94	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.241;DP=828;FS=28.258;HRun=8;HaplotypeScore=103.4668;InbreedingCoeff=0.9885;MQ=83.06;MQ0=5;MQRankSum=-0.567;QD=23.00;ReadPosRankSum=4.423;VQSLOD=3.3609;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,38:42:99:962,101,0	1/1:2,16:18:11.83:397,12,0	0/0:75,1:43:61.71:0,62,756	0/0:97,0:60:72.28:0,72,821	1/1:2,34:36:96.10:917,96,0	0/0:19,0:19:54.17:0,54,652	0/0:22,0:22:60.18:0,60,725	0/0:25,0:25:57.17:0,57,689	0/0:20,0:20:57.16:0,57,676	0/0:41,0:41:99:0,120,1440	0/0:31,0:31:84.26:0,84,1014	1/1:0,24:24:66.11:637,66,0	1/1:3,20:23:28.78:415,29,0	0/0:25,0:25:72.22:0,72,870	0/0:21,0:21:51.16:0,51,616	1/1:2,19:21:17.66:456,18,0	0/0:27,0:27:72.22:0,72,869	1/1:0,12:12:33.05:319,33,0	0/0:19,0:19:57.17:0,57,688	0/0:23,0:23:60.17:0,60,714	0/0:14,0:14:36.03:0,36,416	0/0:30,0:30:81.25:0,81,978	0/0:33,1:34:61.22:0,61,973	0/0:29,0:29:84.25:0,84,1004	0/0:25,0:26:72.06:0,72,818	1/1:3,24:27:38.88:658,39,0	0/0:36,0:36:99:0,108,1278	1/1:2,7:9:12.01:116,12,0
chr10	101787046	.	A	AT	9946.42	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-14.210;DP=728;FS=1.677;HRun=0;HaplotypeScore=65.8320;InbreedingCoeff=0.9721;MQ=90.83;MQ0=0;MQRankSum=-5.470;QD=44.21;ReadPosRankSum=2.826;VQSLOD=5.3791;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:99:1678,105,0	1/1:0,13:13:39.13:624,39,0	0/0:35,0:35:99:0,105,1399	0/0:25,0:25:69.23:0,69,952	1/1:2,32:34:81.28:1294,81,0	0/0:22,0:22:66.22:0,66,923	0/0:29,0:29:87.29:0,87,1216	0/0:28,0:28:81.26:0,81,1118	0/0:30,0:30:90.30:0,90,1258	0/0:37,0:37:99:0,105,1453	0/0:20,0:20:60.20:0,60,839	1/1:0,36:36:99:1678,105,0	1/1:0,28:28:84.29:1342,84,0	0/0:30,0:30:90.30:0,90,1259	0/0:31,0:31:90.30:0,90,1258	1/1:1,32:33:93.32:1487,93,0	0/0:33,0:33:90.30:0,90,1259	1/1:1,19:20:54.18:855,54,0	0/0:16,0:16:48.16:0,48,659	0/0:27,0:27:81.26:0,81,1116	0/0:27,0:27:78.26:0,78,1091	0/0:21,0:21:63.21:0,63,880	0/0:21,0:21:63.21:0,63,880	0/0:28,0:28:81.26:0,81,1116	0/0:20,0:20:57.19:0,57,797	1/1:1,21:22:24.30:940,24,0	0/0:23,0:23:69.23:0,69,960	1/1:0,1:1:3.01:48,3,0
chr10	101787731	.	CCTT	C	1331.58	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.037;DP=628;FS=0.000;HRun=0;HaplotypeScore=110.5998;InbreedingCoeff=0.9751;MQ=76.74;MQ0=2;MQRankSum=0.023;QD=40.35;ReadPosRankSum=1.850;VQSLOD=4.9788;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.18:0,54,1125	0/0:6,0:6:18.06:0,18,407	0/0:44,0:32:78.67:0,79,1419	0/0:50,0:32:40.17:0,40,1166	0/0:25,0:25:66.15:0,66,1364	0/0:31,0:31:78.25:0,78,1715	0/0:22,0:22:63.20:0,63,1348	0/0:33,0:33:75.24:0,75,1583	0/0:12,0:12:33.11:0,33,746	0/0:26,0:26:75.23:0,75,1571	0/0:19,0:19:57.20:0,57,1289	0/0:19,0:19:51.56:0,52,1035	0/0:19,0:19:29.95:0,30,630	0/0:23,0:23:63.21:0,63,1364	0/0:15,0:15:42.14:0,42,929	0/0:11,0:11:18.05:0,18,365	0/0:13,0:13:33.11:0,33,746	0/0:25,0:25:66.18:0,66,1405	0/0:20,0:20:57.19:0,57,1233	0/0:29,0:29:81.23:0,81,1719	0/0:15,0:15:42.10:0,42,839	0/0:23,0:23:69.22:0,69,1477	0/0:19,0:19:57.20:0,57,1286	0/0:18,0:18:39.13:0,39,880	0/0:28,0:28:81.28:0,81,1799	1/1:2,25:27:75.26:1249,75,0	0/0:27,0:27:72.25:0,72,1619	1/1:1,5:6:12.04:200,12,0
chr10	101787752	.	ATTTCTCTC	A	1056.83	PASS	AB=0.824;AC=11;AF=0.196;AN=56;BaseQRankSum=3.691;DP=701;FS=14.253;HRun=0;HaplotypeScore=190.9792;InbreedingCoeff=0.6528;MQ=63.61;MQ0=21;MQRankSum=-2.426;QD=5.53;ReadPosRankSum=-2.940;VQSLOD=0.6736;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,2:19:1.96:308,0,2	1/1:8,0:8:20.91:184,21,0	0/0:68,0:31:23.86:0,24,362	0/1:82,0:31:24.38:24,0,225	1/1:8,22:30:7.01:100,7,0	0/0:32,0:32:68.18:0,68,840	0/0:22,0:22:57.02:0,57,762	0/0:28,0:28:38.93:0,39,502	0/0:15,0:15:42:0,42,627	0/0:24,0:24:44.11:0,44,764	0/0:20,0:20:47.94:0,48,522	1/1:21,0:21:20.53:265,21,0	0/1:5,14:19:30.24:279,0,30	0/0:22,0:22:48.01:0,48,748	0/0:16,0:16:42.02:0,42,536	1/1:10,0:10:5.98:58,6,0	0/0:17,0:17:37.80:0,38,500	0/0:25,0:25:62.95:0,63,697	0/0:18,0:18:12.12:0,12,332	0/0:23,0:23:59.86:0,60,690	0/0:16,0:15:35.43:0,35,467	0/0:21,0:21:51.05:0,51,516	0/0:23,0:23:44.95:0,45,509	0/0:21,0:22:22.25:0,22,414	0/0:28,0:28:63.08:0,63,930	0/0:30,0:30:77.95:0,78,976	0/0:31,0:31:72.91:0,73,1046	0/0:8,0:8:14.95:0,15,132
chr10	101787756	.	CTCTCTT	C	851.53	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=4.736;DP=694;FS=8.567;HRun=0;HaplotypeScore=169.6530;InbreedingCoeff=0.6873;MQ=61.82;MQ0=22;MQRankSum=-3.977;QD=4.53;ReadPosRankSum=-2.895;VQSLOD=1.5588;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:19:17.12:235,17,0	1/1:10,0:10:6.07:142,6,0	0/0:66,0:29:23.82:0,24,362	0/1:81,0:29:21.43:21,0,226	1/1:31,0:31:6.72:44,7,0	0/0:33,1:34:68.77:0,69,722	0/0:24,0:24:56.21:0,56,689	0/0:25,0:25:38.93:0,39,502	0/0:15,0:15:33.31:0,33,502	0/0:22,0:22:44.11:0,44,681	0/0:18,0:18:41.77:0,42,425	1/1:20,0:20:11.47:283,11,0	0/1:17,0:17:25.05:153,0,25	0/0:21,0:21:48.01:0,48,650	0/0:17,0:17:45.03:0,45,567	1/1:1,8:9:5.99:137,6,0	0/0:17,0:17:37.79:0,38,391	0/0:25,0:25:49.96:0,50,507	0/0:15,0:15:6.23:0,6,264	0/0:25,0:25:46.85:0,47,570	0/0:17,0:15:35.41:0,35,337	0/0:20,0:20:50.81:0,51,443	0/0:24,0:24:48.43:0,48,495	0/0:23,0:23:25.02:0,25,353	0/0:29,0:28:65.43:0,65,892	0/0:29,0:29:80.90:0,81,876	0/0:31,0:31:59.66:0,60,756	0/0:9,0:9:17.93:0,18,155
chr10	101787758	.	CTCTT	C	895.16	PASS	AB=0.982;AC=14;AF=0.250;AN=56;BaseQRankSum=5.505;DP=684;FS=4.813;HRun=0;HaplotypeScore=146.4892;InbreedingCoeff=0.2505;MQ=61.39;MQ0=22;MQRankSum=-3.052;QD=3.75;ReadPosRankSum=-2.815;VQSLOD=1.8625;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:18:3.17:216,3,0	1/1:10,0:10:5.88:140,6,0	0/0:64,0:28:23.70:0,24,362	0/1:78,0:28:26.12:26,0,224	1/1:30,0:30:2.30:23,2,0	0/0:32,2:34:64.71:0,65,576	0/0:24,0:24:56.56:0,57,604	0/0:24,0:24:38.93:0,39,502	0/1:15,1:16:35.99:36,0,346	0/0:22,0:22:36.45:0,36,574	0/0:18,0:18:29.66:0,30,408	0/1:19,1:20:25.07:359,0,25	0/1:17,0:17:1.88:124,0,2	0/0:21,0:21:47.93:0,48,570	0/0:17,0:17:45.03:0,45,486	1/1:9,0:9:6.02:74,6,0	0/0:19,0:19:18.68:0,19,287	0/1:24,0:24:40.08:40,0,342	0/1:15,0:15:9.34:9,0,243	0/0:21,4:25:3.31:0,3,449	0/0:16,0:14:34.21:0,34,303	0/0:19,0:19:15.50:0,15,371	0/0:22,0:22:46.88:0,47,379	0/0:17,6:23:2.95:0,3,233	0/0:28,0:27:61.43:0,61,756	0/0:29,0:29:2.32:0,2,581	0/0:31,0:31:1.19:0,1,524	0/0:8,0:8:14.74:0,15,125
chr10	101787762	.	TTC	T	960.68	PASS	AB=0.946;AC=28;AF=0.538;AN=52;BaseQRankSum=1.698;DP=696;FS=4.115;HRun=0;HaplotypeScore=133.4279;InbreedingCoeff=0.0676;MQ=60.55;MQ0=23;MQRankSum=-1.712;QD=2.35;ReadPosRankSum=-0.038;VQSLOD=2.4858;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:16:0.34:0,0,27	0/0:10,0:10:5.95:0,6,52	./.	./.	0/0:32,0:31:2.80:0,3,14	1/1:35,1:36:5.63:57,6,0	0/0:27,0:27:6.13:0,6,69	0/0:26,0:26:2.80:0,3,13	0/1:16,0:16:56.44:56,0,74	1/1:22,1:23:10.40:103,10,0	0/1:17,0:20:5.19:5,0,34	0/1:20,0:20:13.30:13,0,54	0/1:20,0:20:12.86:13,0,36	0/1:17,2:19:20.10:20,0,119	0/0:16,0:16:6.02:0,6,85	1/1:9,0:9:2.14:20,2,0	1/1:19,1:19:16.13:127,16,0	1/1:23,0:23:21.19:183,21,0	1/1:16,0:16:5.99:48,6,0	0/1:25,2:27:9.09:79,0,9	0/1:16,0:14:1.70:11,0,2	1/1:21,0:21:3.31:15,3,0	0/1:19,4:23:8.86:46,0,9	1/1:20,1:22:14.73:124,15,0	0/1:25,2:26:39.80:40,0,139	0/0:30,0:30:4.97:0,5,20	1/1:29,2:32:0.71:153,1,0	0/0:9,0:8:3.48:0,3,31
chr10	101790068	.	CAT	C	235.64	PASS	AC=4;AF=0.080;AN=50;BaseQRankSum=4.179;DP=205;FS=1.202;HRun=0;HaplotypeScore=43.4382;InbreedingCoeff=0.4905;MQ=71.53;MQ0=5;MQRankSum=-4.109;QD=13.86;ReadPosRankSum=1.904;VQSLOD=3.4069;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:16.77:0,17,111	0/0:5,0:5:8.82:0,9,114	0/0:10,0:5:2.68:0,3,11	0/0:13,0:5:2.74:0,3,15	0/0:8,0:8:13.48:0,13,87	0/0:9,0:9:27.09:0,27,459	0/0:2,0:2:3.01:0,3,51	0/0:38,0:38:84.27:0,84,1369	0/0:3,0:3:9.03:0,9,153	0/0:5,0:5:15.05:0,15,255	0/0:4,0:4:6.02:0,6,102	0/0:3,0:3:2.74:0,3,12	0/0:3,0:3:2.60:0,3,10	0/0:6,0:6:15.05:0,15,252	0/0:3,0:3:9.02:0,9,127	0/0:3,0:3:5.69:0,6,61	0/0:12,0:12:21.07:0,21,352	./.	0/0:10,0:10:21.07:0,21,353	0/0:5,0:5:12.04:0,12,204	0/0:4,0:4:9.03:0,9,132	./.	./.	0/0:4,0:4:9.03:0,9,148	0/0:11,0:11:21.07:0,21,354	1/1:2,9:11:26.15:265,26,0	0/0:11,0:11:21.07:0,21,352	1/1:3,3:6:6.02:78,6,0
chr10	101790080	.	CATGCATAT	C	1560.30	PASS	AC=16;AF=0.333;AN=48;BaseQRankSum=7.023;DP=202;FS=1.876;HRun=0;HaplotypeScore=59.9297;InbreedingCoeff=0.7372;MQ=68.92;MQ0=7;MQRankSum=-6.694;QD=30.01;ReadPosRankSum=3.401;VQSLOD=2.7369;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,10:11:15.05:396,15,0	1/1:2,3:5:3.48:80,3,0	0/0:11,0:4:3.48:0,3,43	0/0:15,0:5:2.88:0,3,15	1/1:0,9:9:12.04:318,12,0	0/0:11,0:11:30.10:0,30,1117	./.	0/0:35,0:35:93.31:0,93,3116	0/0:3,0:3:9.03:0,9,349	0/0:8,0:8:21.07:0,21,792	0/0:6,0:6:15.04:0,15,382	1/1:0,6:6:3.01:80,3,0	1/1:0,3:3:3.01:81,3,0	0/0:6,0:6:15.05:0,15,572	0/0:3,0:3:9.03:0,9,391	1/1:1,2:3:3.01:80,3,0	0/0:11,0:11:24.08:0,24,559	./.	0/0:8,0:8:24.07:0,24,578	0/0:5,0:5:12.04:0,12,354	0/0:4,0:4:12.04:0,12,432	./.	./.	0/0:5,0:5:7.58:0,8,272	0/0:7,0:7:21.05:0,21,741	1/1:1,8:9:27.09:600,27,0	0/0:11,0:11:33.11:0,33,1009	1/1:5,0:5:7.27:90,7,0
chr10	101790084	.	CAT	C	469.93	PASS	AB=0.857;AC=21;AF=0.420;AN=50;BaseQRankSum=6.930;DP=197;FS=0.000;HRun=0;HaplotypeScore=43.5011;InbreedingCoeff=0.4596;MQ=68.70;MQ0=7;MQRankSum=-4.025;QD=4.43;ReadPosRankSum=3.943;VQSLOD=1.0370;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:10:14.20:70,14,0	1/1:5,0:5:2.84:14,3,0	0/0:11,0:4:2.67:0,3,16	0/0:17,0:6:2.77:0,3,22	1/1:9,0:9:11.36:56,11,0	0/0:10,0:10:24.08:0,24,387	0/0:1,0:1:3.01:0,3,48	0/1:29,3:32:39.94:40,0,893	0/0:3,0:3:6.02:0,6,97	0/0:7,0:7:18.06:0,18,291	0/0:7,0:7:15.03:0,15,218	1/1:6,0:6:2.84:14,3,0	1/1:3,0:3:2.84:14,3,0	0/1:5,1:6:18.35:18,0,221	0/0:3,0:3:9.03:0,9,141	1/1:3,0:3:2.84:14,3,0	1/1:0,11:11:24.07:291,24,0	./.	0/0:4,0:7:14.03:0,14,111	0/1:3,1:4:27.38:27,0,88	0/0:4,0:4:9.03:0,9,145	./.	./.	0/0:4,0:4:7.58:0,8,100	0/0:5,0:5:15.05:0,15,242	1/1:12,0:12:13.96:74,14,0	0/0:12,0:12:24.08:0,24,385	1/1:4,0:4:1.25:3,1,0
chr10	101790965	.	TTG	T	9631.76	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=19.651;DP=779;FS=4.404;HRun=0;HaplotypeScore=132.7280;InbreedingCoeff=0.9999;MQ=80.53;MQ0=0;MQRankSum=-11.235;QD=44.80;ReadPosRankSum=3.640;VQSLOD=5.6841;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:44:99:1956,120,0	1/1:0,15:14:42.14:685,42,0	0/0:24,0:24:72.18:0,72,1167	0/0:20,0:20:44.40:0,44,719	1/1:0,22:22:48.16:783,48,0	0/0:33,0:33:99:0,99,2012	0/0:27,0:27:81.26:0,81,1587	0/0:27,0:27:78.27:0,78,1568	0/0:27,0:27:81.28:0,81,1645	0/0:32,0:32:96.33:0,96,1951	0/0:32,0:32:96.33:0,96,1931	1/1:0,13:13:33.11:538,33,0	1/1:0,22:22:60.20:975,60,0	0/0:31,0:31:90.31:0,90,1807	0/0:34,0:34:99:0,102,2072	1/1:0,45:45:99:2053,126,0	0/0:31,0:31:93.31:0,93,1854	./.	0/0:31,0:31:90.26:0,90,1719	0/0:26,0:26:75.24:0,75,1474	0/0:38,0:38:99:0,114,2315	0/0:26,0:26:78.25:0,78,1526	0/0:28,0:28:84.29:0,84,1692	0/0:33,0:33:99:0,99,1989	0/0:30,0:30:90.31:0,90,1829	1/1:0,36:36:99:1762,108,0	0/0:34,0:34:99:0,99,1992	1/1:0,18:18:54.18:881,54,0
chr10	101791179	.	CT	C	5666.90	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=18.569;DP=769;FS=3.990;HRun=2;HaplotypeScore=143.7685;InbreedingCoeff=0.9996;MQ=89.58;MQ0=0;MQRankSum=-14.763;QD=33.93;ReadPosRankSum=1.617;VQSLOD=4.4206;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:51.12:639,51,0	1/1:0,10:9:27.09:348,27,0	0/0:36,0:36:85.11:0,85,1245	0/0:34,0:34:92.35:0,92,1162	1/1:0,15:15:36.12:463,36,0	0/0:27,0:27:75.24:0,75,1101	0/0:23,0:23:69.23:0,69,1029	0/0:30,0:29:87.28:0,87,1261	0/0:33,0:33:96.30:0,96,1395	0/0:36,0:36:99:0,105,1564	0/0:26,0:26:72.24:0,72,1078	1/1:1,21:22:60.19:775,60,0	1/1:0,21:21:60.19:772,60,0	0/0:25,0:25:75.25:0,75,1118	0/0:45,0:45:99:0,132,1977	1/1:0,29:29:78.25:1008,78,0	0/0:33,0:33:99:0,99,1460	./.	0/0:26,0:26:69.23:0,69,1034	0/0:38,0:38:99:0,108,1560	0/0:43,0:43:99:0,126,1863	0/0:33,0:33:99:0,99,1444	0/0:32,0:32:96.31:0,96,1413	0/0:23,0:23:69.23:0,69,1034	0/0:30,0:30:90.28:0,90,1310	1/1:1,34:35:99:1320,102,0	0/0:29,0:28:87.25:0,87,1211	1/1:0,10:10:27.09:343,27,0
chr10	101791466	.	A	ACCTACACT	17411.08	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=1.084;DP=723;FS=0.000;HRun=0;HaplotypeScore=181.0178;InbreedingCoeff=0.9896;MQ=86.27;MQ0=0;MQRankSum=-17.416;QD=95.14;ReadPosRankSum=2.034;VQSLOD=5.2088;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,15:30:60.16:2488,60,0	1/1:7,3:11:24.04:878,24,0	0/0:21,0:21:59.94:0,60,1517	0/0:32,0:32:90.17:0,90,2098	1/1:7,10:21:24.05:956,24,0	0/0:26,0:26:75.24:0,75,2092	0/0:24,0:24:63.22:0,63,1788	0/0:33,0:33:93.30:0,93,2475	0/0:33,0:33:99:0,99,2702	0/0:28,0:28:81.28:0,81,2222	0/0:26,0:26:69.21:0,69,1821	1/1:9,21:32:81.28:3493,81,0	1/1:7,18:27:69.24:2936,69,0	0/0:22,0:22:66.23:0,66,1839	0/0:32,0:32:96.33:0,96,2655	1/1:5,19:25:63.22:2752,63,0	0/0:23,0:23:69.24:0,69,1828	1/1:3,5:8:21.07:914,21,0	0/0:21,0:21:60.16:0,60,1473	0/0:34,0:34:99:0,102,2764	0/0:36,0:36:99:0,105,2890	0/0:20,0:20:57.16:0,57,1510	0/0:29,0:29:87.30:0,87,2455	0/0:29,0:29:87.30:0,87,2479	0/0:34,0:34:96.33:0,96,2628	1/1:7,14:23:66.21:2599,66,0	0/0:37,0:37:99:0,105,2913	1/1:1,2:6:9.03:396,9,0
chr10	101792315	.	G	GT	7819.31	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.376;DP=729;FS=3.029;HRun=5;HaplotypeScore=81.4629;InbreedingCoeff=0.9997;MQ=87.95;MQ0=0;MQRankSum=-7.103;QD=35.22;ReadPosRankSum=3.867;VQSLOD=4.6903;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:75.24:987,75,0	1/1:0,11:11:30.05:375,30,0	0/0:29,0:29:74.32:0,74,799	0/0:26,0:26:72.17:0,72,762	1/1:3,29:32:87.28:1143,87,0	0/0:30,0:29:87.15:0,87,913	0/0:25,0:25:66.03:0,66,667	0/0:31,0:31:75.17:0,75,800	0/0:20,0:20:57.14:0,57,613	0/0:29,0:29:78.19:0,78,833	0/0:24,0:24:66.14:0,66,700	1/1:0,17:17:45.15:591,45,0	1/1:1,29:30:87.28:1145,87,0	0/0:28,0:28:78.19:0,78,837	0/0:24,0:24:72.14:0,72,750	1/1:2,31:34:84.27:1101,84,0	0/0:21,1:22:26.72:0,27,638	1/1:1,26:27:72.23:947,72,0	0/0:25,0:25:60.13:0,60,637	0/0:32,0:32:93.20:0,93,981	0/0:27,0:26:75.16:0,75,795	0/0:26,0:26:72.18:0,72,774	0/0:30,0:30:81.16:0,81,857	0/0:22,0:22:66.12:0,66,684	0/0:26,0:26:78.20:0,78,838	1/1:5,27:32:57.99:1056,58,0	0/0:31,0:31:93.15:0,93,963	1/1:0,12:12:36.12:474,36,0
chr10	101793140	.	T	TGA	1130.39	PASS	AB=1.000;AC=26;AF=0.500;AN=52;BaseQRankSum=-0.221;DP=543;FS=2.266;HRun=0;HaplotypeScore=103.0195;InbreedingCoeff=0.5243;MQ=67.80;MQ0=7;MQRankSum=1.023;QD=3.99;ReadPosRankSum=-1.554;VQSLOD=2.2900;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:3:25,3,0	1/1:8,0:8:6.46:49,6,0	./.	./.	0/1:21,0:21:14.15:17,0,14	0/0:17,0:17:25.13:0,25,213	0/1:18,0:18:63.45:63,0,164	1/1:22,0:22:5.94:41,6,0	1/1:13,6:19:12.04:178,12,0	0/0:24,0:23:11.72:0,12,220	0/0:20,0:22:25.30:0,25,222	0/0:19,0:19:5.48:0,5,23	0/0:17,0:17:7.48:0,7,35	1/1:12,7:20:6.02:89,6,0	0/0:21,0:20:21.70:0,22,199	1/1:18,0:17:1.82:5,2,0	0/0:20,0:20:23.83:0,24,227	0/0:14,0:14:2.68:0,3,11	1/1:12,4:15:11.53:141,12,0	1/1:17,2:22:28.58:260,29,0	1/1:9,4:15:9.03:134,9,0	0/1:19,0:19:4.87:5,0,174	0/0:26,0:26:38.73:0,39,384	0/0:19,0:22:29.74:0,30,283	0/0:14,0:18:24.29:0,24,157	0/1:20,0:20:10.90:11,0,23	1/1:17,11:27:13.97:264,14,0	1/1:13,0:12:5.49:30,5,0
chr10	101793177	.	GAGAGAA	G	1894.73	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=8.368;DP=636;FS=1.385;HRun=0;HaplotypeScore=141.3064;InbreedingCoeff=0.7486;MQ=59.76;MQ0=22;MQRankSum=-1.130;QD=11.92;ReadPosRankSum=-3.447;VQSLOD=2.1770;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:32.95:271,33,0	0/1:9,0:9:72.83:73,0,177	0/0:32,0:9:19.57:0,20,183	0/0:41,0:13:6.11:0,6,164	1/1:22,3:25:41.60:454,42,0	0/0:25,0:25:63.03:0,63,966	0/0:21,0:21:19.71:0,20,743	0/0:35,0:35:20.47:0,20,629	0/0:16,0:16:27.05:0,27,526	0/0:30,0:29:31.47:0,31,1189	0/0:29,0:29:71.57:0,72,1111	1/1:3,18:21:5.92:137,6,0	1/1:2,15:17:10.59:209,11,0	0/0:19,0:19:38.80:0,39,506	0/0:28,0:26:62.47:0,62,1099	1/1:18,0:18:19.77:217,20,0	0/0:20,0:19:41.90:0,42,705	0/0:13,0:13:2.99:0,3,24	0/1:7,0:7:20.22:20,0,202	0/0:25,0:25:12.57:0,13,819	0/0:12,0:12:23.46:0,23,361	0/0:24,0:24:35.38:0,35,1138	0/0:20,0:20:60.06:0,60,1577	0/0:20,0:19:41.14:0,41,833	0/0:24,0:23:57.21:0,57,877	1/1:29,0:28:37.60:467,38,0	0/0:43,0:42:55.31:0,55,1176	1/1:13,0:12:29.93:240,30,0
chr10	101793388	.	T	TA	3957.95	PASS	AB=0.625;AC=17;AF=0.304;AN=56;BaseQRankSum=17.723;DP=637;FS=28.256;HRun=2;HaplotypeScore=102.7178;InbreedingCoeff=0.8683;MQ=76.46;MQ0=0;MQRankSum=-8.495;QD=22.49;ReadPosRankSum=3.313;VQSLOD=2.1607;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,11:15:3.79:266,4,0	1/1:1,2:3:6.01:63,6,0	0/0:20,0:20:53.94:0,54,647	0/0:22,0:22:60.18:0,60,733	0/1:12,18:30:58.96:439,0,59	0/0:22,0:22:66.19:0,66,804	0/0:13,0:13:30.09:0,30,371	0/0:29,0:29:78.24:0,78,957	0/0:22,0:22:60.17:0,60,730	0/0:29,0:29:84.25:0,84,1020	0/0:18,0:18:54.17:0,54,669	1/1:2,17:19:54.05:521,54,0	1/1:0,20:20:59.87:552,60,0	0/0:29,0:29:87.27:0,87,1078	0/0:27,0:27:81.25:0,81,1004	1/1:8,23:31:29.05:704,29,0	0/0:20,0:20:60.14:0,60,711	1/1:1,14:15:44.43:421,44,0	0/0:21,0:21:63.20:0,63,781	0/0:36,0:36:99:0,105,1289	0/0:28,0:28:78.24:0,78,967	0/0:22,0:22:66.21:0,66,818	0/0:22,0:22:63.20:0,63,781	0/0:28,0:28:81.25:0,81,1004	0/0:20,0:20:60.17:0,60,719	1/1:8,26:34:15.76:791,16,0	0/0:33,0:33:90.27:0,90,1102	1/1:2,7:9:21.02:200,21,0
chr10	101793392	.	A	AATT	8794.91	PASS	AB=0.536;AC=17;AF=0.304;AN=56;BaseQRankSum=17.183;DP=625;FS=19.049;HRun=0;HaplotypeScore=107.0683;InbreedingCoeff=0.8983;MQ=76.56;MQ0=0;MQRankSum=-7.190;QD=51.43;ReadPosRankSum=1.061;VQSLOD=5.6069;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,9:14:39.06:667,39,0	1/1:0,2:2:6.02:125,6,0	0/0:23,0:23:60.06:0,60,978	0/0:23,0:23:52.43:0,52,931	1/1:12,18:30:74.99:1174,75,0	0/0:26,0:26:78.15:0,78,1230	0/0:11,0:11:33.09:0,33,552	0/0:25,0:25:75.23:0,75,1312	0/0:22,0:22:63.19:0,63,1110	0/0:26,0:26:78.25:0,78,1397	0/0:18,0:18:54.19:0,54,987	1/1:2,17:19:54.19:1072,54,0	1/1:3,20:23:66.20:1223,66,0	0/0:28,0:28:84.29:0,84,1564	0/0:28,0:28:81.28:0,81,1495	1/1:5,23:28:84.25:1600,84,0	0/0:17,0:17:51.13:0,51,882	1/1:2,14:16:45.15:885,45,0	0/0:21,0:21:63.22:0,63,1158	0/0:35,0:35:99:0,102,1858	0/0:27,0:27:78.27:0,78,1440	0/0:23,0:23:66.23:0,66,1224	0/0:22,0:22:66.21:0,66,1195	0/0:28,0:28:84.27:0,84,1532	0/0:21,0:21:63.18:0,63,1067	0/1:4,26:30:21.53:1587,0,22	0/0:30,0:30:90.29:0,90,1642	1/1:2,7:9:27.05:461,27,0
chr10	101793779	.	AT	A	6254.57	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.887;DP=630;FS=5.152;HRun=1;HaplotypeScore=61.4476;InbreedingCoeff=0.9675;MQ=89.78;MQ0=1;MQRankSum=-1.785;QD=39.09;ReadPosRankSum=2.965;VQSLOD=5.5944;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:63.21:881,63,0	1/1:0,11:11:33.11:462,33,0	0/0:27,0:27:68.63:0,69,1050	0/0:20,0:20:57.13:0,57,873	1/1:0,29:29:87.25:1195,87,0	0/0:31,0:31:93.32:0,93,1477	0/0:18,0:18:54.17:0,54,837	0/0:28,0:28:84.26:0,84,1314	0/0:23,0:23:69.22:0,69,1079	0/0:33,0:33:99:0,99,1577	0/0:21,0:21:63.20:0,63,984	1/1:0,16:16:48.16:672,48,0	1/1:0,21:21:54.18:756,54,0	0/0:28,1:29:42.20:0,42,1230	0/0:23,0:23:69.24:0,69,1103	1/1:0,23:22:66.22:923,66,0	0/0:18,0:18:52.06:0,52,806	1/1:0,7:7:12.04:168,12,0	0/0:14,0:14:42.14:0,42,672	0/0:40,0:40:99:0,120,1893	0/0:14,0:14:42.13:0,42,643	0/0:18,0:18:54.18:0,54,863	0/0:24,0:24:72.25:0,72,1147	0/0:24,0:24:69.22:0,69,1080	0/0:20,0:20:60.20:0,60,959	1/1:0,28:28:84.26:1157,84,0	0/0:45,0:45:99:0,135,2132	1/1:0,1:1:3.01:42,3,0
chr10	101793980	.	T	TA	9002.59	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=18.299;DP=711;FS=2.162;HRun=1;HaplotypeScore=96.3588;InbreedingCoeff=0.9908;MQ=89.26;MQ0=0;MQRankSum=-1.058;QD=44.13;ReadPosRankSum=4.132;VQSLOD=4.3895;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:37:99:1582,99,0	1/1:1,18:19:51.17:815,51,0	0/0:25,0:25:72.14:0,72,941	0/0:31,0:31:86.05:0,86,1157	1/1:1,29:30:78.27:1247,78,0	0/0:24,0:24:69.20:0,69,965	0/0:28,0:28:84.26:0,84,1155	0/0:34,0:34:99:0,102,1346	0/0:23,0:23:66.22:0,66,923	0/0:34,0:34:99:0,102,1427	0/0:21,0:21:60.20:0,60,839	1/1:0,31:31:84.29:1343,84,0	1/1:0,13:13:36.12:576,36,0	0/0:22,0:22:63.17:0,63,844	0/0:24,0:24:72.24:0,72,1007	1/1:0,24:24:72.25:1151,72,0	0/0:17,0:17:51.17:0,51,712	1/1:2,14:16:45.15:710,45,0	0/0:28,0:28:81.27:0,81,1127	0/0:41,0:41:99:0,120,1676	0/0:30,0:30:87.27:0,87,1196	0/0:14,0:14:42.14:0,42,588	0/0:13,0:13:39.13:0,39,546	0/0:31,0:31:90.20:0,90,1192	0/0:30,0:30:75.50:0,76,1186	1/1:1,29:30:90.31:1434,90,0	0/0:37,0:36:99:0,108,1507	1/1:0,3:3:9.03:144,9,0
chr10	101794116	.	A	AC	7084.41	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=7.931;DP=633;FS=9.661;HRun=0;HaplotypeScore=67.1398;InbreedingCoeff=0.9946;MQ=81.14;MQ0=0;MQRankSum=-2.022;QD=42.42;ReadPosRankSum=3.984;VQSLOD=5.1336;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:33:99:1552,99,0	1/1:1,10:11:27.09:432,27,0	0/0:21,0:21:60.19:0,60,797	0/0:13,0:12:33.09:0,33,416	1/1:1,24:25:72.25:1151,72,0	0/0:21,0:21:63.20:0,63,865	0/0:22,0:22:66.22:0,66,923	0/0:30,0:30:87.27:0,87,1176	0/0:23,0:23:69.23:0,69,965	0/0:27,0:27:78.26:0,78,1091	0/0:21,0:21:63.21:0,63,881	1/1:0,31:31:75.26:1198,75,0	1/1:0,16:16:48.16:766,48,0	0/0:29,0:29:87.27:0,87,1187	0/0:30,0:30:90.30:0,90,1259	1/1:0,19:19:51.17:805,51,0	0/0:18,0:18:51.16:0,51,697	1/1:1,16:17:43.39:674,43,0	0/0:27,0:27:81.24:0,81,1080	0/0:30,0:30:90.28:0,90,1226	0/0:34,0:34:99:0,102,1426	0/0:18,0:18:54.17:0,54,739	0/0:21,0:21:60.20:0,60,839	0/0:27,0:27:81.27:0,81,1133	0/0:22,0:22:66.18:0,66,874	1/1:0,8:8:24.04:315,24,0	0/0:32,0:32:96.31:0,96,1326	1/1:0,6:6:12.04:192,12,0
chr10	101795281	.	GT	G	5750.64	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.845;DP=572;FS=4.119;HRun=2;HaplotypeScore=66.9701;InbreedingCoeff=0.9988;MQ=75.94;MQ0=0;MQRankSum=-2.380;QD=35.50;ReadPosRankSum=2.289;VQSLOD=5.5157;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:63.14:796,63,0	1/1:1,12:13:36.12:464,36,0	0/0:19,0:19:50:0,50,573	0/0:15,1:14:33.95:0,34,420	1/1:0,24:24:72.23:934,72,0	0/0:24,0:24:72.23:0,72,1059	0/0:18,0:18:51.17:0,51,761	0/0:42,0:42:99:0,120,1712	0/0:16,0:16:48.09:0,48,692	0/0:28,0:27:84.28:0,84,1243	0/0:22,0:22:66.20:0,66,946	1/1:0,9:9:27.09:351,27,0	1/1:0,28:28:75.24:973,75,0	0/0:15,0:15:39.12:0,39,564	0/0:26,0:26:78.26:0,78,1167	1/1:0,16:16:45.15:584,45,0	0/0:29,0:29:87.28:0,87,1276	1/1:0,19:19:51.17:662,51,0	0/0:19,0:19:57.18:0,57,836	0/0:32,0:32:93.31:0,93,1389	0/0:10,0:10:30.10:0,30,450	0/0:9,0:9:27.08:0,27,383	0/0:25,0:25:75.24:0,75,1101	0/0:12,0:12:33.11:0,33,493	0/0:23,0:23:69.23:0,69,1030	1/1:3,19:22:35.22:713,35,0	0/0:25,0:24:75.23:0,75,1079	1/1:0,9:9:21.07:273,21,0
chr10	101796888	.	GAC	G	2187.87	PASS	AB=0.964;AC=24;AF=0.429;AN=56;BaseQRankSum=8.582;DP=601;FS=1.646;HRun=0;HaplotypeScore=85.7794;InbreedingCoeff=0.3522;MQ=50.83;MQ0=57;MQRankSum=-0.115;QD=6.82;ReadPosRankSum=-4.473;VQSLOD=2.1826;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,7:17:27.09:404,27,0	1/1:2,0:2:6.02:86,6,0	0/0:95,0:13:15.55:0,16,215	0/1:100,1:17:29.40:29,0,256	1/1:6,2:8:17.09:230,17,0	0/0:18,0:18:0.83:0,1,678	0/0:18,1:19:42.13:0,42,721	0/0:24,2:25:24.99:0,25,904	0/0:5,1:6:15.05:0,15,290	0/1:11,0:11:65.45:65,0,364	0/0:10,0:10:21.07:0,21,384	1/1:1,2:3:6.02:80,6,0	0/1:4,2:6:11.24:74,0,11	0/0:17,4:21:36.12:0,36,729	0/1:20,0:19:57.97:58,0,590	1/1:1,8:9:3.01:35,3,0	0/1:31,1:31:37.88:38,0,974	1/1:3,6:9:23.23:369,23,0	0/1:15,0:14:0.22:0,0,570	0/0:17,1:18:32.81:0,33,540	0/1:46,0:46:99:260,0,1417	0/0:19,2:20:26.01:0,26,766	0/0:20,0:20:41.71:0,42,689	0/1:23,0:22:59.48:59,0,589	0/0:8,1:8:11.58:0,12,194	1/1:1,10:11:27.08:368,27,0	0/0:16,1:16:40.62:0,41,644	1/1:5,1:6:15.05:223,15,0
chr10	101796896	.	GAC	G	1708.48	PASS	AB=0.932;AC=23;AF=0.426;AN=54;BaseQRankSum=9.368;DP=554;FS=3.313;HRun=0;HaplotypeScore=83.9295;InbreedingCoeff=0.1144;MQ=48.61;MQ0=55;MQRankSum=-1.159;QD=4.45;ReadPosRankSum=-3.543;VQSLOD=1.6455;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,7:15:21.07:320,21,0	./.	0/1:73,4:8:39.70:80,0,40	0/1:82,8:13:99:144,0,119	1/1:3,2:5:9.03:135,9,0	0/0:19,0:19:45.09:0,45,634	0/0:19,1:20:45.04:0,45,683	0/0:27,0:25:58.64:0,59,796	0/0:6,1:7:8.74:0,9,200	0/1:14,0:14:65.31:65,0,282	0/0:8,0:8:11.09:0,11,136	1/1:0,2:2:3.01:35,3,0	0/1:2,2:4:10.95:41,0,11	0/0:19,2:21:39.09:0,39,520	0/1:18,0:17:68.94:69,0,619	1/1:1,7:8:3.01:35,3,0	0/1:26,2:27:16.03:16,0,816	0/1:8,0:8:5.59:10,0,6	0/1:13,0:13:30.64:31,0,401	0/0:16,0:16:29.99:0,30,385	0/1:41,1:41:99:295,0,838	0/0:17,2:19:41.91:0,42,617	0/0:18,0:18:36.11:0,36,497	0/1:26,1:25:41.99:42,0,416	0/1:9,2:10:18.80:19,0,187	1/1:7,2:9:24.07:329,24,0	0/0:14,1:14:24.92:0,25,329	1/1:5,1:6:15.05:222,15,0
chr10	101796898	.	CTG	C	226.08	PASS	AB=0.983;AC=10;AF=0.294;AN=34;BaseQRankSum=2.557;DP=556;FS=0.000;HRun=0;HaplotypeScore=89.8311;InbreedingCoeff=-0.0341;MQ=47.32;MQ0=55;MQRankSum=-1.250;QD=1.45;ReadPosRankSum=2.734;VQSLOD=1.5358;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	0/0:20,0:20:12.02:0,12,156	0/0:20,0:20:15.05:0,15,220	0/0:30,0:28:9.02:0,9,94	0/1:8,0:8:7.61:8,0,38	0/0:13,0:13:7.31:0,7,36	1/1:7,1:8:3.01:32,3,0	./.	./.	0/0:21,0:21:3.01:0,3,44	0/0:18,0:18:3.49:0,3,95	./.	0/1:28,1:28:54.83:55,0,292	./.	0/1:13,1:14:17.75:26,0,18	0/0:14,1:16:0:0,0,0	0/1:43,0:42:33.36:49,0,33	0/0:19,0:19:9.03:0,9,129	0/0:18,0:18:3.01:0,3,44	0/1:28,0:26:18.80:19,0,107	0/1:11,0:10:25.76:26,0,38	./.	1/1:10,5:15:11.70:128,12,0	./.
chr10	101797297	.	GGA	G	720.86	PASS	AB=0.560;AC=5;AF=0.089;AN=56;BaseQRankSum=8.448;DP=461;FS=2.245;HRun=0;HaplotypeScore=59.4911;InbreedingCoeff=0.7742;MQ=79.52;MQ0=0;MQRankSum=-0.502;QD=17.58;ReadPosRankSum=-2.458;VQSLOD=2.6430;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:36.40:205,36,0	0/0:15,0:15:45.02:0,45,680	0/0:18,0:18:19.23:0,19,582	0/0:15,0:15:28.06:0,28,362	0/0:19,0:19:45.14:0,45,750	0/0:23,0:23:69.17:0,69,1133	0/0:19,0:19:54.11:0,54,897	0/0:22,0:22:57.14:0,57,852	0/0:10,0:10:30.10:0,30,515	0/0:24,0:23:66.21:0,66,1111	0/0:13,0:13:39.10:0,39,617	0/0:18,0:18:48.16:0,48,814	0/0:17,0:17:48.15:0,48,785	0/0:16,0:16:42.08:0,42,636	0/0:16,0:16:48.15:0,48,802	0/0:18,0:18:54.18:0,54,904	0/0:23,0:23:66.16:0,66,1054	0/0:15,0:15:45.10:0,45,718	0/0:15,0:15:45.15:0,45,742	0/0:17,0:17:48.15:0,48,783	0/0:16,0:16:45.11:0,45,704	0/0:23,0:22:66.21:0,66,1108	0/0:11,0:11:33:0,33,481	0/0:7,0:7:21.07:0,21,363	0/0:12,0:12:36.06:0,36,526	0/1:3,11:14:12.68:461,0,13	0/0:18,0:18:54.18:0,54,920	1/1:3,2:5:12.04:181,12,0
chr10	101797298	.	GA	G	840.88	PASS	AB=0.875;AC=5;AF=0.089;AN=56;BaseQRankSum=7.620;DP=463;FS=5.014;HRun=1;HaplotypeScore=52.2160;InbreedingCoeff=0.8551;MQ=79.41;MQ0=0;MQRankSum=0.460;QD=20.51;ReadPosRankSum=-3.050;VQSLOD=2.7993;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,11:22:60.09:646,60,0	0/0:15,0:15:44.90:0,45,522	0/0:16,1:17:15.96:0,16,447	0/0:16,0:16:29.42:0,29,307	0/0:20,0:20:48.13:0,48,620	0/0:23,0:23:69.16:0,69,901	0/0:18,0:18:54.11:0,54,712	0/0:22,0:22:57.12:0,57,695	0/0:10,0:10:30.10:0,30,407	0/0:23,0:23:66.20:0,66,881	0/0:14,0:14:39.08:0,39,497	0/0:18,0:18:48.12:0,48,628	0/0:17,0:17:48.10:0,48,609	0/0:15,0:15:42.08:0,42,511	0/0:18,0:18:54.14:0,54,686	0/0:19,0:19:54.12:0,54,707	0/0:22,0:22:66.16:0,66,839	0/0:15,0:15:45.09:0,45,574	0/0:17,0:17:51.13:0,51,637	0/0:17,0:17:48.01:0,48,610	0/0:15,0:15:45.09:0,45,560	0/0:23,0:22:66.21:0,66,881	0/0:11,0:11:33:0,33,393	0/0:7,0:7:21.07:0,21,286	0/0:12,0:12:36.04:0,36,422	0/1:12,2:14:1.89:238,0,2	0/0:18,0:18:54.16:0,54,712	1/1:2,3:5:11.90:83,12,0
chr10	101797857	.	A	ACAC	3481.17	PASS	AB=0.554;AC=12;AF=0.214;AN=56;BaseQRankSum=-3.484;DP=619;FS=11.438;HRun=0;HaplotypeScore=98.4163;InbreedingCoeff=0.7837;MQ=64.91;MQ0=2;MQRankSum=-1.060;QD=27.20;ReadPosRankSum=1.628;VQSLOD=3.5039;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:30:39.98:40,0,87	1/1:3,3:6:14.83:231,15,0	0/0:23,0:22:66.17:0,66,974	0/0:30,0:30:81.11:0,81,1123	1/1:0,11:12:29.97:577,30,0	0/0:24,0:24:69.21:0,69,1150	0/0:31,0:31:90.26:0,90,1499	0/0:24,0:24:66.18:0,66,1051	0/0:19,0:19:54.14:0,54,912	0/0:28,0:28:77.95:0,78,1211	0/0:18,0:18:40.79:0,41,621	1/1:2,19:26:47.74:1034,48,0	1/1:2,8:13:33.58:688,34,0	0/0:23,0:23:69.24:0,69,1208	0/0:23,0:23:63.10:0,63,985	1/1:0,16:16:39.13:888,39,0	0/0:37,0:37:99:0,111,1850	0/0:1,0:35:48.15:0,48,227	0/0:15,0:14:39.39:0,39,588	0/0:14,0:14:36.07:0,36,532	0/0:32,0:32:90.23:0,90,1411	0/0:12,0:12:36.06:0,36,537	0/0:17,0:17:42.10:0,42,686	0/0:23,0:23:66.19:0,66,1102	0/0:26,0:26:75.22:0,75,1208	0/1:3,0:23:23.95:24,0,131	0/0:25,0:25:72.21:0,72,1196	0/0:4,0:11:22.72:0,23,130
chr10	101799522	.	GCACACA	G	1728.41	PASS	AB=0.957;AC=11;AF=0.196;AN=56;BaseQRankSum=4.382;DP=627;FS=0.597;HRun=0;HaplotypeScore=150.5670;InbreedingCoeff=0.1177;MQ=67.04;MQ0=9;MQRankSum=-1.204;QD=10.23;ReadPosRankSum=4.089;VQSLOD=2.3050;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:19:20.73:192,0,21	0/1:7,0:7:32.36:112,0,32	0/0:22,0:14:8.75:0,9,76	0/0:30,0:22:6.02:0,6,138	1/1:20,0:24:15.52:309,16,0	0/0:25,0:25:60.13:0,60,1338	0/0:26,0:28:12.51:0,13,990	0/0:28,0:28:52.69:0,53,1086	0/0:18,0:18:42.13:0,42,1204	0/0:26,0:25:42.14:0,42,1112	0/1:20,1:22:14.27:14,0,1115	0/1:12,0:14:15.91:322,0,16	1/1:22,1:26:0.07:414,0,0	0/0:27,0:26:56.68:0,57,1486	0/0:26,0:26:66.22:0,66,1802	0/0:9,12:21:6.42:0,6,50	0/0:27,0:27:60.16:0,60,1248	0/1:14,0:13:66.91:86,0,67	0/0:16,0:16:27.06:0,27,489	0/0:18,0:18:36.10:0,36,838	0/0:32,0:30:25.21:0,25,1084	0/0:26,0:26:57.15:0,57,1329	0/0:14,0:14:24:0,24,477	0/0:33,0:33:57.17:0,57,1497	0/0:14,0:14:30.10:0,30,878	0/1:23,0:22:8.12:255,0,8	0/0:25,0:24:18.85:0,19,1258	0/1:19,0:19:99:172,0,145
chr10	101799548	.	A	ACTCTCTCTCT	1402.79	PASS	AB=0.963;AC=10;AF=0.179;AN=56;BaseQRankSum=8.372;DP=678;FS=4.610;HRun=0;HaplotypeScore=224.9993;InbreedingCoeff=0.0136;MQ=52.28;MQ0=26;MQRankSum=-3.377;QD=8.82;ReadPosRankSum=-0.944;VQSLOD=2.4486;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:25.12:46,0,25	0/1:5,0:5:30.64:122,0,31	0/0:16,0:4:11.80:0,12,153	0/0:19,0:6:12.04:0,12,222	0/1:11,5:17:11.03:11,0,14	0/0:28,0:28:58.90:0,59,2059	0/0:36,0:35:89.91:0,90,2209	0/0:38,0:35:96.28:0,96,2479	0/0:18,0:18:51.16:0,51,1590	0/0:29,0:27:75.20:0,75,2312	0/0:18,0:18:51.18:0,51,1650	0/1:17,0:16:4.60:170,0,5	0/1:25,0:24:72.63:322,0,73	0/0:26,0:24:63.22:0,63,1990	0/0:32,0:32:93.28:0,93,2844	1/1:19,0:18:2.69:96,3,0	0/0:35,0:34:92.77:0,93,2647	0/1:17,0:15:88.34:88,0,252	0/0:27,0:23:60.17:0,60,1450	0/0:22,0:21:57.20:0,57,1742	0/0:42,0:38:87.17:0,87,2560	0/0:28,0:28:75.21:0,75,2156	0/0:22,0:19:48.02:0,48,1253	0/0:40,0:39:76.98:0,77,2245	0/0:20,0:19:51.15:0,51,1677	0/1:30,0:30:99:424,0,260	0/0:23,0:23:57.67:0,58,1844	0/1:14,0:14:79.21:265,0,79
chr10	101799579	.	C	CTCTCTCTCTCTT	3604.21	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=10.916;DP=772;FS=4.716;HRun=0;HaplotypeScore=249.4881;InbreedingCoeff=0.1240;MQ=55.81;MQ0=37;MQRankSum=-8.182;QD=21.45;ReadPosRankSum=-0.795;VQSLOD=2.5079;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,12:26:2.97:20,3,0	0/1:8,0:8:52.88:122,0,53	0/0:51,0:16:41.39:0,41,448	0/0:70,0:26:8.53:0,9,177	0/0:16,0:16:10.29:0,10,160	0/0:22,0:22:45.52:0,46,974	0/0:30,0:29:81.85:0,82,2011	0/0:34,0:30:72.95:0,73,1293	0/0:15,0:15:32.64:0,33,693	0/0:31,0:30:62.71:0,63,1424	0/0:26,0:25:64.94:0,65,1071	0/1:22,0:20:99:207,0,110	0/1:24,0:22:99:898,0,107	0/0:26,0:25:53.62:0,54,1063	0/0:37,0:37:90.37:0,90,1753	0/1:26,0:25:99:158,0,165	0/0:32,0:32:72.34:0,72,1743	1/1:14,0:13:2.39:407,2,0	0/0:20,0:17:45.02:0,45,980	0/0:25,0:24:53.99:0,54,1229	0/0:40,0:38:61.68:0,62,1507	0/0:22,0:21:48.06:0,48,1046	0/0:31,0:28:74.95:0,75,1631	0/0:38,0:37:66.65:0,67,1470	0/0:19,0:18:41.88:0,42,1318	0/1:33,0:33:48.64:1619,0,49	0/0:19,0:19:47.99:0,48,1246	0/1:15,0:15:99:174,0,125
chr10	101800680	.	GGATA	G	2556.18	PASS	AB=0.960;AC=17;AF=0.327;AN=52;BaseQRankSum=9.219;DP=753;FS=1.551;HRun=0;HaplotypeScore=139.7867;InbreedingCoeff=0.9126;MQ=60.59;MQ0=4;MQRankSum=1.229;QD=11.21;ReadPosRankSum=2.690;VQSLOD=3.3157;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:39:48.04:0,48,699	1/1:4,8:12:12.04:189,12,0	./.	./.	1/1:13,26:40:38.92:476,39,0	0/0:32,0:31:51.17:0,51,1147	0/0:22,0:21:37.27:0,37,726	0/0:44,0:44:19.35:0,19,504	0/0:23,0:23:51.17:0,51,1103	0/0:29,0:28:36.12:0,36,843	0/0:41,0:41:84.24:0,84,1761	1/1:9,20:29:33.11:519,33,0	1/1:13,27:40:39.13:613,39,0	0/0:35,2:37:37.15:0,37,1805	0/0:22,0:36:36.09:0,36,628	1/1:9,17:26:17.97:283,18,0	0/0:20,0:20:45.15:0,45,1025	1/1:8,10:18:18.06:283,18,0	0/0:17,0:15:27.09:0,27,578	0/0:15,0:38:37.24:0,37,619	0/0:14,0:14:24.08:0,24,568	0/0:19,0:19:33.11:0,33,738	0/0:30,0:30:36.12:0,36,817	0/0:20,0:20:36.11:0,36,712	0/1:23,1:24:5.02:5,0,730	1/1:10,0:30:23.24:303,23,0	0/0:13,0:36:42.14:0,42,736	1/1:4,0:8:9.01:83,9,0
chr10	101800769	.	TGAGAGAGA	T	231.59	PASS	AB=0.512;AC=1;AF=0.018;AN=56;BaseQRankSum=4.889;DP=711;FS=2.977;HRun=0;HaplotypeScore=173.7783;InbreedingCoeff=0.4924;MQ=66.42;MQ0=5;MQRankSum=-2.758;QD=11.03;ReadPosRankSum=-2.379;VQSLOD=2.5487;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:1,19:21:2.62:306,0,3	0/0:14,0:14:36.11:0,36,1456	0/0:38,0:24:48.26:0,48,1381	0/0:32,0:23:13.30:0,13,793	0/0:27,0:27:72.11:0,72,2592	0/0:23,0:23:69.13:0,69,2274	0/0:27,0:27:78.16:0,78,2550	0/0:43,0:43:99:0,129,3207	0/0:22,0:22:66.07:0,66,1728	0/0:28,0:28:84.24:0,84,3154	0/0:25,0:25:75.14:0,75,2355	0/0:32,0:32:78.22:0,78,3050	0/0:29,0:29:63.18:0,63,2415	0/0:25,0:25:75.14:0,75,2431	0/0:42,0:42:99:0,108,4098	0/0:29,0:29:75.19:0,75,2422	0/0:22,0:22:57.98:0,58,2059	0/0:16,0:16:36.03:0,36,1334	0/0:11,0:11:33.06:0,33,821	0/0:27,0:27:72.21:0,72,2816	0/0:22,0:22:66.19:0,66,2361	0/0:13,0:13:39.10:0,39,1443	0/0:21,0:21:57.13:0,57,1843	0/0:24,0:24:56.99:0,57,2176	0/0:30,0:30:90.17:0,90,2874	0/0:26,0:26:78.21:0,78,2892	0/0:30,0:30:72.19:0,72,2633	0/0:12,0:12:28.61:0,29,997
chr10	101804075	.	TCCCTGTGTTGGAATGGAA	T	754.94	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.199;DP=662;FS=6.497;HRun=0;HaplotypeScore=304.1531;InbreedingCoeff=0.9262;MQ=76.79;MQ0=1;MQRankSum=-4.183;QD=31.46;ReadPosRankSum=0.034;VQSLOD=1.1126;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,8:24:18.49:846,18,0	0/0:14,0:14:21.07:0,21,1371	0/0:29,0:27:18.06:0,18,872	0/0:31,0:31:27.09:0,27,1278	0/0:18,0:18:21.06:0,21,1523	0/0:16,0:16:30.10:0,30,2304	0/0:29,0:29:60.19:0,60,3858	0/0:32,0:32:18.06:0,18,796	0/0:17,0:17:27.09:0,27,2161	0/0:38,0:38:54.18:0,54,3495	0/0:23,0:23:45.15:0,45,3204	0/0:23,0:23:36.12:0,36,2786	0/0:24,0:24:42.10:0,42,2883	0/0:13,0:13:21.07:0,21,1773	0/0:25,0:25:60.19:0,60,4105	0/0:21,0:21:36.12:0,36,2489	0/0:18,0:18:36.12:0,36,2971	0/0:22,0:22:27.09:0,27,2118	0/0:23,0:22:18.06:0,18,1493	0/0:30,0:30:66.23:0,66,4934	0/0:40,0:40:90.31:0,90,7249	0/0:28,0:28:63.22:0,63,4957	0/0:24,0:24:54.19:0,54,3909	0/0:20,0:19:33.11:0,33,2514	0/0:21,0:21:36.11:0,36,2796	0/0:25,0:25:60.21:0,60,4461	0/0:28,0:28:48.16:0,48,3620	0/0:6,0:6:12.04:0,12,665
chr10	101805956	.	AAG	A	537.98	PASS	AB=0.966;AC=7;AF=0.125;AN=56;BaseQRankSum=6.116;DP=746;FS=9.747;HRun=0;HaplotypeScore=117.9203;InbreedingCoeff=0.3110;MQ=64.98;MQ0=3;MQRankSum=0.461;QD=6.04;ReadPosRankSum=-1.619;VQSLOD=1.9193;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:3.48:0,3,44	0/0:11,0:11:2.83:0,3,39	0/0:34,0:19:7.16:0,7,61	0/0:39,0:23:4.28:0,4,20	0/0:31,0:30:8.07:0,8,80	0/0:32,0:32:12.47:0,12,637	0/1:16,1:17:33.22:33,0,414	0/0:41,1:42:25.10:0,25,734	0/0:19,0:19:29.62:0,30,563	0/0:30,0:29:37.45:0,37,686	0/0:25,1:26:13.54:0,14,607	0/0:22,0:34:2.97:0,3,20	0/0:43,0:42:15.84:0,16,109	0/0:31,0:31:34.96:0,35,945	0/0:28,1:29:10.63:0,11,702	0/0:36,0:35:8.04:0,8,102	0/0:24,0:25:45.98:0,46,790	0/0:8,0:17:2.99:0,3,26	0/1:14,0:13:16.61:17,0,206	0/1:20,1:21:7.17:7,0,278	0/0:25,0:25:51.12:0,51,689	0/0:34,1:35:19.51:0,20,732	0/0:16,0:16:29.95:0,30,511	0/0:26,0:26:45.12:0,45,654	0/0:19,2:21:4.45:0,4,470	1/1:9,15:25:45.05:463,45,0	0/0:34,0:34:57.09:0,57,787	1/1:5,6:12:14.88:153,15,0
chr10	101807866	.	TTATATATATA	T	2579.05	PASS	AB=0.632;AC=13;AF=0.283;AN=46;BaseQRankSum=6.800;DP=204;FS=3.702;HRun=0;HaplotypeScore=67.8741;InbreedingCoeff=0.6538;MQ=62.71;MQ0=0;MQRankSum=-7.037;QD=30.70;ReadPosRankSum=1.896;VQSLOD=2.6463;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:11:11.71:0,12,182	1/1:1,4:5:9.03:279,9,0	0/0:3,0:3:5.68:0,6,39	0/0:9,0:4:6:0,6,52	1/1:5,19:24:36.04:932,36,0	0/0:9,0:9:21.07:0,21,880	./.	0/0:29,0:32:63.21:0,63,2494	./.	0/0:8,0:8:18.06:0,18,835	0/0:2,0:2:3.01:0,3,117	1/1:2,5:7:12.04:374,12,0	1/1:5,4:9:9.03:279,9,0	./.	0/0:2,0:2:6.02:0,6,300	1/1:5,8:13:18.06:541,18,0	0/0:12,0:12:33.09:0,33,1447	1/1:9,5:14:6.02:187,6,0	0/0:7,0:7:15.05:0,15,505	0/0:6,0:6:9.03:0,9,460	0/0:4,0:4:12.04:0,12,529	./.	./.	0/0:2,0:2:6.02:0,6,222	0/0:3,0:3:9.03:0,9,379	0/1:5,0:12:20.24:149,0,20	0/0:2,0:2:6.02:0,6,202	0/0:3,0:3:6.02:0,6,81
chr10	101809216	.	ATGTGTGTG	A	179.73	PASS	AB=1.000;AC=9;AF=0.205;AN=44;BaseQRankSum=2.445;DP=157;FS=0.000;HRun=0;HaplotypeScore=34.7370;InbreedingCoeff=0.4271;MQ=44.36;MQ0=21;MQRankSum=-1.449;QD=5.99;ReadPosRankSum=1.625;VQSLOD=1.1671;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:14:2.59:55,3,0	./.	./.	./.	1/1:1,2:3:1.25:3,1,0	0/0:4,0:4:6.02:0,6,203	0/0:7,0:8:15.05:0,15,528	0/0:10,0:7:11.51:0,12,105	0/0:5,0:5:6.02:0,6,219	0/0:5,0:4:11.94:0,12,215	./.	1/1:2,3:4:5.92:151,6,0	1/1:0,6:6:3.01:76,3,0	./.	0/0:4,0:4:12.04:0,12,434	0/1:2,0:2:0:0,0,0	0/0:6,0:6:18.06:0,18,742	0/0:2,0:8:8.96:0,9,69	0/0:4,0:3:3.01:0,3,75	0/0:3,0:3:3.01:0,3,124	0/0:10,0:9:9.91:0,10,276	0/0:1,0:1:3.01:0,3,123	./.	0/0:10,0:11:12.50:0,12,364	0/0:2,0:2:3.01:0,3,122	0/0:2,0:2:6.02:0,6,119	0/0:4,0:4:6.02:0,6,176	0/0:1,0:1:3.01:0,3,65
chr10	101813445	.	TCCCC	T	3874.86	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=1.934;DP=495;FS=26.446;HRun=13;HaplotypeScore=102.9661;InbreedingCoeff=0.9276;MQ=80.77;MQ0=3;MQRankSum=-1.935;QD=23.92;ReadPosRankSum=7.979;VQSLOD=-0.0515;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:41:11.75:96,12,0	1/1:2,13:15:33.06:482,33,0	0/0:36,0:21:29.84:0,30,512	0/0:28,0:22:15.47:0,15,256	1/1:6,16:22:36.04:526,36,0	0/0:11,0:13:17.88:0,18,320	0/0:20,0:23:27.04:0,27,359	0/0:26,0:28:23.16:0,23,264	0/0:4,0:5:9.02:0,9,169	0/0:11,0:11:18.02:0,18,248	0/0:13,0:13:23.97:0,24,303	1/1:4,19:23:51.10:745,51,0	1/1:2,21:23:60.14:877,60,0	0/0:10,0:10:27.05:0,27,396	0/0:15,0:21:33.04:0,33,521	1/1:2,18:20:48.12:702,48,0	0/0:17,0:22:56.92:0,57,832	1/1:4,10:14:30.06:439,30,0	0/0:9,0:11:18.01:0,18,212	0/0:8,0:9:9:0,9,102	0/0:10,0:14:15:0,15,195	0/0:10,0:10:12.01:0,12,159	0/0:11,0:11:24:0,24,302	0/0:16,0:17:35.71:0,36,607	0/0:13,0:13:17.79:0,18,256	0/0:6,0:13:17.58:0,18,104	0/0:22,0:24:48.11:0,48,830	1/1:2,0:4:2.47:7,2,0
chr10	101813456	.	CCCA	C	444.80	PASS	AB=0.985;AC=11;AF=0.196;AN=56;BaseQRankSum=5.285;DP=476;FS=5.737;HRun=0;HaplotypeScore=103.5312;InbreedingCoeff=-0.0495;MQ=80.05;MQ0=3;MQRankSum=-4.384;QD=2.38;ReadPosRankSum=4.231;VQSLOD=1.3053;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,6:39:45.57:454,0,46	0/1:16,0:16:13.94:14,0,64	0/0:38,0:22:27.58:0,28,524	0/1:24,0:17:15.66:16,0,112	0/1:19,0:18:2.31:2,0,38	0/0:11,0:11:20.55:0,21,185	0/0:19,0:19:13.74:0,14,266	0/0:24,0:24:20.27:0,20,180	0/0:5,0:5:12.01:0,12,169	0/0:10,0:10:18.49:0,18,176	0/0:11,0:11:16.10:0,16,147	0/1:21,0:21:10.13:10,0,36	0/1:23,0:23:16.15:16,0,36	0/0:12,0:12:23.03:0,23,228	0/0:22,0:22:29.94:0,30,322	0/0:21,0:21:15.13:0,15,89	0/0:27,0:27:18.64:0,19,411	0/1:13,0:13:1.25:1,0,49	0/1:10,0:10:9.55:10,0,63	0/0:7,0:7:5.93:0,6,44	0/0:14,0:14:20.59:0,21,149	0/0:7,0:7:12.47:0,12,156	0/0:11,0:11:3.66:0,4,184	0/0:19,0:19:28.63:0,29,366	0/0:11,0:11:9.33:0,9,143	0/1:19,0:19:28.10:28,0,186	0/0:20,0:20:32.80:0,33,334	1/1:3,0:3:5.72:29,6,0
chr10	101814143	.	CAGAG	C	3099.42	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.727;DP=575;FS=2.902;HRun=0;HaplotypeScore=118.8412;InbreedingCoeff=0.9955;MQ=76.80;MQ0=7;MQRankSum=-1.786;QD=30.69;ReadPosRankSum=1.872;VQSLOD=3.3456;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:66.23:0,66,1606	1/1:5,11:16:27.09:461,27,0	0/0:41,0:26:30.61:0,31,529	0/0:61,0:46:58.78:0,59,893	1/1:5,23:28:41.21:992,41,0	0/0:19,0:18:45.15:0,45,1131	0/0:22,0:22:57.20:0,57,1348	0/0:29,0:29:56.97:0,57,1168	0/0:15,0:15:42.14:0,42,978	0/0:14,0:14:33.11:0,33,778	0/0:15,0:16:38.92:0,39,763	1/1:5,14:19:36.12:617,36,0	1/1:6,10:15:33.09:532,33,0	0/0:18,0:18:42.14:0,42,1040	0/0:18,0:18:42.14:0,42,1020	1/1:3,9:12:24.08:410,24,0	0/0:26,0:26:63.21:0,63,1535	1/1:2,8:10:18.02:276,18,0	0/0:16,0:16:27.08:0,27,569	0/0:23,0:23:51.15:0,51,1097	0/0:15,0:15:33.10:0,33,743	0/0:23,0:24:59.98:0,60,1340	0/0:17,0:17:42.14:0,42,1049	0/0:13,0:12:21.07:0,21,515	0/0:20,0:20:60.21:0,60,1423	0/0:17,0:17:42.14:0,42,994	0/0:10,0:11:23.87:0,24,528	0/0:8,0:8:24.08:0,24,559
chr10	101815665	.	GTA	G	2664.51	PASS	AB=0.875;AC=20;AF=0.357;AN=56;BaseQRankSum=10.643;DP=321;FS=10.723;HRun=0;HaplotypeScore=55.6525;InbreedingCoeff=0.7166;MQ=78.04;MQ0=0;MQRankSum=0.806;QD=18.63;ReadPosRankSum=4.249;VQSLOD=2.5258;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,6:16:6.02:70,6,0	1/1:0,9:9:18.06:225,18,0	0/0:12,0:10:6:0,6,59	0/0:13,0:12:0.35:0,0,27	1/1:3,21:24:45.14:563,45,0	0/0:13,0:13:33.11:0,33,537	0/0:5,0:5:6:0,6,73	0/0:34,0:33:75.25:0,75,1193	0/1:4,2:6:25.49:25,0,137	0/0:12,0:12:24.08:0,24,367	0/0:14,0:14:36.12:0,36,585	1/1:3,9:12:21.07:258,21,0	1/1:1,10:11:21.07:263,21,0	0/0:4,0:4:12.04:0,12,195	0/0:4,0:4:12.04:0,12,195	1/1:3,9:12:18.06:225,18,0	0/0:9,0:9:27.09:0,27,425	1/1:1,7:8:18.06:225,18,0	0/1:11,0:11:7.35:7,0,376	0/0:10,0:10:27.09:0,27,436	0/0:6,0:6:9.03:0,9,149	0/0:2,0:2:3.01:0,3,46	0/0:8,0:8:11.71:0,12,152	0/0:5,0:5:9.03:0,9,141	0/0:16,0:16:33.11:0,33,537	1/1:5,17:22:49.96:591,50,0	0/0:9,0:9:24.06:0,24,371	1/1:0,12:12:33.11:413,33,0
chr10	101817391	.	TTG	T	1794.10	PASS	AB=0.958;AC=16;AF=0.286;AN=56;BaseQRankSum=5.618;DP=622;FS=0.000;HRun=0;HaplotypeScore=83.7481;InbreedingCoeff=0.7658;MQ=69.29;MQ0=2;MQRankSum=2.450;QD=9.54;ReadPosRankSum=0.756;VQSLOD=3.2657;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,5:28:56.12:619,56,0	1/1:2,4:7:3.01:37,3,0	0/1:32,1:19:4.99:5,0,335	0/0:33,0:20:27.81:0,28,307	1/1:6,21:27:18.49:205,18,0	0/1:16,1:17:3.86:4,0,391	0/0:30,0:30:78.27:0,78,1226	0/0:16,0:16:39.13:0,39,623	0/0:16,0:16:45.15:0,45,692	0/0:33,0:33:77.99:0,78,1188	0/0:22,0:22:49.01:0,49,707	1/1:4,12:16:12.04:148,12,0	1/1:24,1:25:62:739,62,0	0/0:16,0:16:39.12:0,39,600	0/0:18,0:18:2.18:0,2,522	1/1:2,10:12:9.03:111,9,0	0/0:35,1:36:46.13:0,46,1164	1/1:6,17:23:9.03:111,9,0	0/0:17,0:17:8.64:0,9,415	0/0:18,0:18:27.09:0,27,437	0/0:37,0:37:93.17:0,93,1342	0/0:12,0:12:33.11:0,33,529	0/0:21,0:21:45.62:0,46,732	0/0:33,0:33:78.05:0,78,1213	0/0:24,0:23:54.06:0,54,807	0/0:18,0:18:45.15:0,45,732	0/0:25,0:25:20.26:0,20,804	0/0:9,0:9:27.09:0,27,400
chr10	101817427	.	ATGTG	A	225.18	PASS	AB=0.940;AC=7;AF=0.135;AN=52;BaseQRankSum=3.660;DP=704;FS=2.089;HRun=0;HaplotypeScore=124.4583;InbreedingCoeff=0.1722;MQ=54.23;MQ0=15;MQRankSum=-0.786;QD=1.34;ReadPosRankSum=-0.035;VQSLOD=2.0981;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,25:45:20.77:255,21,0	0/0:8,0:8:21.07:0,21,439	./.	./.	0/1:24,1:28:11.70:12,0,438	0/0:17,0:19:41.86:0,42,764	0/1:30,1:31:40.85:41,0,850	0/0:27,0:24:41.90:0,42,601	0/0:16,0:16:32.83:0,33,625	0/0:41,0:38:55.38:0,55,886	0/0:26,0:26:48.16:0,48,954	0/0:23,0:23:28.03:0,28,460	0/1:20,0:21:12.30:12,0,309	0/0:21,0:21:39.09:0,39,629	0/1:15,0:16:21.80:22,0,312	0/0:18,0:18:35.47:0,35,679	0/0:40,0:43:72.86:0,73,1471	0/0:26,0:25:27.41:0,27,235	0/0:28,0:25:14.30:0,14,446	0/0:27,0:26:34.20:0,34,675	0/0:51,0:51:74.98:0,75,1542	0/0:13,0:14:35.56:0,36,506	0/1:25,1:25:14.67:15,0,472	0/0:41,0:41:74.94:0,75,1445	0/0:29,0:28:30.10:0,30,607	0/0:25,0:24:38.83:0,39,568	0/0:23,0:22:38.56:0,39,544	0/0:7,0:7:9.03:0,9,182
chr10	101817531	.	T	TG	716.49	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.476;DP=634;FS=1.537;HRun=8;HaplotypeScore=68.4882;InbreedingCoeff=0.9292;MQ=80.28;MQ0=0;MQRankSum=-2.000;QD=21.71;ReadPosRankSum=-0.589;VQSLOD=3.6805;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:33:26.32:810,26,0	0/0:10,0:10:30.02:0,30,275	0/0:22,0:22:36.35:0,36,332	0/0:19,0:19:10.57:0,11,194	0/0:24,0:24:66.03:0,66,604	0/0:28,0:28:71.99:0,72,645	0/0:22,0:22:35.48:0,35,492	0/0:22,0:22:48:0,48,435	0/0:32,0:32:81.02:0,81,741	0/0:30,0:30:72.02:0,72,654	0/0:8,0:8:15:0,15,137	0/0:20,0:20:54.02:0,54,494	0/0:25,0:25:71.88:0,72,638	0/0:14,0:14:42.01:0,42,380	0/0:25,0:25:69.03:0,69,632	0/0:20,0:20:57:0,57,513	0/0:26,0:26:72.02:0,72,654	0/0:18,0:18:44.97:0,45,399	0/0:18,0:18:47.99:0,48,430	0/0:33,0:33:81.01:0,81,734	0/0:21,0:21:51:0,51,461	0/0:22,0:22:54.01:0,54,494	0/0:21,0:21:57.03:0,57,522	0/0:34,0:33:87.05:0,87,796	0/0:34,0:34:90.02:0,90,818	0/0:22,0:21:60.03:0,60,548	0/0:25,0:25:69.01:0,69,626	0/0:6,0:6:15.01:0,15,137
chr10	101818149	.	T	TTGCC	1358.09	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=-6.057;DP=617;FS=12.371;HRun=0;HaplotypeScore=92.3182;InbreedingCoeff=0.9304;MQ=55.26;MQ0=16;MQRankSum=-5.534;QD=42.44;ReadPosRankSum=-1.984;VQSLOD=3.0758;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:66.21:0,66,1056	0/0:7,0:7:21.07:0,21,345	0/0:25,0:3:5.30:0,5,85	./.	0/0:10,0:10:15.05:0,15,247	0/0:19,0:19:54.18:0,54,883	0/0:21,0:21:45.14:0,45,712	0/0:24,0:24:36.10:0,36,543	0/0:18,0:18:36.12:0,36,589	0/0:24,0:24:60.20:0,60,963	0/0:17,0:17:27.09:0,27,440	0/0:19,0:19:45.13:0,45,690	0/0:20,0:20:39.12:0,39,604	0/0:22,0:22:54.14:0,54,813	0/0:35,0:35:81.28:0,81,1321	0/0:29,0:29:60.18:0,60,937	0/0:26,0:26:69.21:0,69,1107	0/0:24,0:24:57.19:0,57,901	0/0:22,0:21:27.09:0,27,442	0/0:22,0:22:42.14:0,42,689	0/0:35,0:35:75.24:0,75,1229	0/0:13,0:13:33.11:0,33,531	0/0:17,0:17:39.13:0,39,639	0/0:24,0:24:45.13:0,45,712	0/0:26,0:26:51.15:0,51,806	1/1:7,11:18:36.10:821,36,0	0/0:32,0:31:75.26:0,75,1222	1/1:1,11:13:27.09:657,27,0
chr10	101820050	.	AT	A	2038.86	PASS	AB=0.955;AC=13;AF=0.232;AN=56;BaseQRankSum=11.627;DP=611;FS=1.905;HRun=10;HaplotypeScore=64.5702;InbreedingCoeff=0.8989;MQ=72.15;MQ0=0;MQRankSum=0.983;QD=14.67;ReadPosRankSum=3.059;VQSLOD=4.1241;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:28:63.48:0,63,665	1/1:3,10:13:23.98:208,24,0	0/1:20,1:21:6.02:6,0,296	0/0:6,0:5:6.02:0,6,65	1/1:4,23:27:37.80:477,38,0	0/0:23,0:23:65.77:0,66,705	0/0:22,0:22:34.02:0,34,569	0/0:25,1:26:40.12:0,40,670	0/0:16,0:16:39.11:0,39,431	0/0:24,0:24:51.14:0,51,564	0/0:26,0:26:60.63:0,61,665	1/1:2,15:17:32.99:287,33,0	1/1:2,21:23:59.99:520,60,0	0/0:21,0:21:54.14:0,54,589	0/0:27,0:27:66.17:0,66,722	1/1:2,23:25:56.99:495,57,0	0/0:23,0:23:66.14:0,66,712	1/1:1,12:13:26.99:234,27,0	0/0:32,0:32:81.05:0,81,871	0/0:29,0:29:78.17:0,78,833	0/0:26,0:26:69.17:0,69,753	0/0:12,0:12:33.08:0,33,358	0/0:17,0:18:47.96:0,48,512	0/0:25,0:25:68.62:0,69,711	0/0:26,0:26:69.18:0,69,757	0/0:23,1:24:40.03:0,40,647	0/0:25,0:23:60.16:0,60,664	0/0:12,0:12:33.07:0,33,356
chr10	101820783	.	CTCTG	C	5814.94	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.198;DP=656;FS=0.000;HRun=0;HaplotypeScore=112.3375;InbreedingCoeff=0.9975;MQ=72.57;MQ0=1;MQRankSum=-4.663;QD=47.28;ReadPosRankSum=4.129;VQSLOD=5.5715;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.23:0,66,1700	1/1:0,7:7:21.07:386,21,0	0/0:24,0:21:40.42:0,40,1213	0/0:23,0:22:42.97:0,43,949	1/1:1,29:30:84.24:1498,84,0	0/0:20,0:20:54.19:0,54,1389	0/0:20,0:20:54.19:0,54,1397	0/0:46,0:46:99:0,120,2982	0/0:19,0:19:51.17:0,51,1305	0/0:27,0:27:69.22:0,69,1691	0/0:20,0:20:54.17:0,54,1371	1/1:2,24:26:63.17:1123,63,0	1/1:1,27:28:72.25:1320,72,0	0/0:23,0:23:57.20:0,57,1496	0/0:25,0:25:72.22:0,72,1762	1/1:1,23:24:63.22:1157,63,0	0/0:26,0:26:69.22:0,69,1705	1/1:0,8:8:18.06:331,18,0	0/0:27,0:27:72.23:0,72,1793	0/0:25,0:25:72.19:0,72,1655	0/0:15,0:15:42.14:0,42,1027	0/0:27,0:27:78.27:0,78,2019	0/0:28,0:28:78.27:0,78,1995	0/0:15,0:15:42.14:0,42,1108	0/0:32,0:32:96.30:0,96,2411	0/0:19,0:19:57.17:0,57,1300	0/0:29,0:29:81.26:0,81,2043	0/0:18,0:18:51.18:0,51,1286
chr10	101821038	.	A	AT	1117.30	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.796;DP=784;FS=4.613;HRun=3;HaplotypeScore=75.6728;InbreedingCoeff=0.9992;MQ=80.04;MQ0=1;MQRankSum=-4.045;QD=29.40;ReadPosRankSum=0.890;VQSLOD=3.0723;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,35:37:83.58:1212,84,0	0/0:13,0:13:33.10:0,33,395	0/0:22,0:20:48.11:0,48,548	0/0:34,0:32:79.29:0,79,805	0/0:29,0:29:84.23:0,84,985	0/0:25,0:25:69.20:0,69,816	0/0:41,0:41:99:0,114,1367	0/0:29,0:29:72.22:0,72,864	0/0:22,0:22:63.19:0,63,756	0/0:33,0:33:93.26:0,93,1089	0/0:20,0:20:60.17:0,60,709	0/0:26,0:26:78.22:0,78,914	0/0:27,0:27:81.21:0,81,956	0/0:25,0:25:75.23:0,75,899	0/0:30,0:30:87.24:0,87,1021	0/0:23,0:23:66.19:0,66,779	0/0:41,0:41:99:0,123,1458	0/0:27,0:27:75.23:0,75,896	0/0:26,0:26:72.20:0,72,851	0/0:28,0:28:84.25:0,84,997	0/0:32,0:32:87.27:0,87,1044	0/0:28,0:28:78.23:0,78,925	0/0:21,0:21:60.18:0,60,720	0/0:37,0:37:99:0,108,1268	0/0:38,0:38:99:0,111,1310	0/0:26,0:26:78.21:0,78,908	0/0:32,0:32:93.28:0,93,1116	0/0:11,0:11:30.09:0,30,358
chr10	101821765	.	TTC	T	1289.72	PASS	AB=0.855;AC=26;AF=0.520;AN=50;BaseQRankSum=2.296;DP=705;FS=3.367;HRun=0;HaplotypeScore=100.6923;InbreedingCoeff=0.6662;MQ=65.96;MQ0=8;MQRankSum=2.648;QD=3.52;ReadPosRankSum=2.606;VQSLOD=2.2629;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:39:14:66,14,0	0/0:14,0:18:23.64:0,24,202	./.	./.	0/0:24,0:24:10.88:0,11,69	1/1:17,10:25:3:33,3,0	1/1:27,15:42:15.04:163,15,0	./.	1/1:16,8:24:6.49:66,6,0	0/0:33,0:33:14.42:0,14,234	0/0:14,0:14:14.70:0,15,162	0/0:12,0:19:2.85:0,3,25	0/0:19,0:18:2.48:0,2,40	1/1:15,1:17:14.69:125,15,0	1/1:16,13:30:20.89:209,21,0	0/0:20,0:20:20.08:0,20,142	1/1:11,11:22:15.04:163,15,0	0/1:16,0:16:12.72:13,0,173	0/0:22,0:22:2.88:0,3,15	1/1:25,0:25:7.83:70,8,0	1/1:14,1:15:4.25:35,4,0	1/1:8,13:21:14.90:133,15,0	1/1:17,2:21:21.72:157,22,0	1/1:26,12:38:17.85:176,18,0	0/0:16,0:16:14.95:0,15,152	0/0:34,0:37:32.64:0,33,268	0/1:16,10:26:4.75:67,0,5	0/0:21,0:22:9.02:0,9,97
chr10	101822815	.	AAGACAG	A	1146.47	PASS	AC=18;AF=0.346;AN=52;BaseQRankSum=8.283;DP=581;FS=12.032;HRun=0;HaplotypeScore=112.0226;InbreedingCoeff=0.8301;MQ=57.79;MQ0=8;MQRankSum=0.681;QD=6.78;ReadPosRankSum=-0.620;VQSLOD=1.6335;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:32:2.97:32,3,0	1/1:2,4:6:5.87:40,6,0	./.	./.	1/1:8,10:18:17.82:122,18,0	0/0:22,0:22:30.05:0,30,612	0/0:22,0:22:27.09:0,27,474	0/0:32,0:29:17.97:0,18,221	0/0:25,0:25:36.09:0,36,973	0/0:18,0:18:33.10:0,33,627	0/0:17,0:17:21.06:0,21,452	1/1:8,10:18:5.97:73,6,0	1/1:7,12:19:15.05:285,15,0	0/0:22,0:22:25.14:0,25,809	0/0:24,0:24:39.08:0,39,732	1/1:7,7:13:3.01:60,3,0	0/0:31,0:32:1.26:0,1,930	1/1:11,1:12:5.95:44,6,0	0/0:17,0:15:15.01:0,15,358	0/0:18,0:18:18.06:0,18,343	0/0:38,0:37:60.20:0,60,1223	0/0:24,0:24:31.25:0,31,756	0/0:16,0:16:27.09:0,27,552	0/0:32,0:32:54.15:0,54,1372	0/0:13,0:13:11.71:0,12,212	1/1:14,10:24:30.06:432,30,0	0/0:20,0:18:36.12:0,36,831	1/1:9,16:25:12.04:242,12,0
chr10	101823982	.	AT	A	1080.80	PASS	AB=0.905;AC=5;AF=0.089;AN=56;BaseQRankSum=8.837;DP=463;FS=7.016;HRun=3;HaplotypeScore=48.3854;InbreedingCoeff=0.7778;MQ=86.36;MQ0=0;MQRankSum=-3.278;QD=19.65;ReadPosRankSum=1.031;VQSLOD=2.8765;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:57.18:707,57,0	0/0:6,0:6:18.06:0,18,259	0/0:17,0:17:51.15:0,51,675	0/0:16,0:16:45.11:0,45,557	0/0:24,0:24:63.20:0,63,886	0/0:13,0:13:39.13:0,39,562	0/0:11,0:11:33.11:0,33,475	0/0:46,0:46:99:0,135,1893	0/0:19,0:19:57.19:0,57,821	0/0:24,0:24:66.22:0,66,940	0/0:21,0:21:60.20:0,60,863	0/0:15,0:15:42.13:0,42,589	0/0:11,0:11:33.11:0,33,475	0/0:13,0:13:39.13:0,39,562	0/0:14,0:14:42.14:0,42,605	0/0:8,0:8:24.08:0,24,346	0/1:17,2:19:20.21:20,0,637	1/1:1,16:17:39.12:483,39,0	0/0:19,0:19:51.15:0,51,712	0/0:17,0:17:51.16:0,51,715	0/0:13,0:13:36.12:0,36,519	0/0:10,0:10:30.10:0,30,432	0/0:13,0:13:39.13:0,39,559	0/0:11,0:11:33.10:0,33,457	0/0:20,0:20:60.19:0,60,849	0/0:17,0:17:51.16:0,51,709	0/0:18,0:18:51.15:0,51,715	0/0:12,0:12:30.09:0,30,413
chr10	101825841	.	TA	T	5366.26	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=17.470;DP=807;FS=0.723;HRun=1;HaplotypeScore=110.6602;InbreedingCoeff=0.9968;MQ=68.08;MQ0=0;MQRankSum=-6.622;QD=36.76;ReadPosRankSum=2.766;VQSLOD=4.8077;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,175,2748	1/1:0,7:7:15.05:210,15,0	0/0:22,0:22:66.23:0,66,1056	0/0:29,0:28:75.25:0,75,1177	1/1:0,24:24:57.19:796,57,0	0/0:30,0:30:84.29:0,84,1343	0/0:24,0:24:69.24:0,69,1100	0/0:30,0:30:90.29:0,90,1398	0/0:37,0:36:99:0,108,1716	0/0:42,0:42:99:0,123,1916	0/0:24,0:24:72.23:0,72,1128	1/1:0,21:21:60.20:838,60,0	1/1:0,38:38:99:1404,102,0	0/0:26,0:26:78.27:0,78,1247	0/0:36,0:36:99:0,108,1727	1/1:0,35:35:99:1363,99,0	0/0:47,0:47:99:0,138,2158	1/1:0,21:21:54.18:755,54,0	0/0:22,0:22:63.21:0,63,967	0/0:19,0:19:57.19:0,57,911	0/0:29,0:29:84.29:0,84,1338	0/0:28,0:28:81.25:0,81,1229	0/0:22,0:22:66.21:0,66,1031	0/0:38,0:38:99:0,111,1774	0/0:21,0:21:63.21:0,63,1007	0/0:30,0:30:90.31:0,90,1439	0/0:35,0:35:99:0,105,1654	0/0:12,0:12:36.12:0,36,575
chr10	101826119	.	AAG	A	559.19	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=6.669;DP=505;FS=4.186;HRun=0;HaplotypeScore=89.6493;InbreedingCoeff=0.8919;MQ=78.31;MQ0=0;MQRankSum=-5.547;QD=25.42;ReadPosRankSum=3.491;VQSLOD=4.4751;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:6.02:66,6,0	1/1:1,3:4:12.02:131,12,0	0/0:15,0:16:39.31:0,39,629	0/0:17,0:17:41.68:0,42,604	1/1:0,5:5:12.04:143,12,0	0/0:23,0:23:69.24:0,69,1402	0/0:28,0:28:84.29:0,84,1695	0/0:30,0:30:90.29:0,90,1735	0/0:19,0:19:57.20:0,57,1131	0/0:30,0:30:90.29:0,90,1740	0/0:17,0:17:48.12:0,48,968	1/1:2,3:5:15.03:178,15,0	1/1:0,4:4:12.04:143,12,0	0/0:16,0:16:48.16:0,48,975	0/0:25,0:25:75.26:0,75,1506	1/1:0,1:1:3.01:36,3,0	0/0:19,0:19:57.20:0,57,1158	1/1:0,1:1:3.01:37,3,0	0/0:19,0:19:57.17:0,57,1113	0/0:30,0:30:90.31:0,90,1829	0/0:19,0:19:57.20:0,57,1158	0/0:26,0:26:78.27:0,78,1557	0/0:20,0:20:60.21:0,60,1219	0/0:29,0:29:87.30:0,87,1739	0/0:28,0:28:84.28:0,84,1672	0/0:22,0:22:66.21:0,66,1284	0/0:34,0:34:99:0,102,2041	0/0:16,0:16:48.16:0,48,975
chr10	101826123	.	TTATTCTGTGGTCTTCACAGAATATCGGATTACACCTCTGGCTG	T	5647.27	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.175;DP=507;FS=6.350;HRun=0;HaplotypeScore=516.6024;InbreedingCoeff=0.8767;MQ=75.02;MQ0=0;MQRankSum=-7.150;QD=313.74;ReadPosRankSum=5.417;VQSLOD=4.1264;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:6.02:587,6,0	1/1:0,3:3:9.03:958,9,0	0/0:14,0:15:36.09:0,36,1129	0/0:10,0:10:19.58:0,20,527	1/1:0,4:4:12.04:1229,12,0	0/0:23,0:23:69.24:0,69,9482	0/0:28,0:28:81.28:0,81,10038	0/0:31,0:31:87.29:0,87,6443	0/0:18,0:18:54.19:0,54,8467	0/0:27,0:27:81.28:0,81,9928	0/0:18,0:18:51.17:0,51,7364	1/1:0,3:3:9.03:958,9,0	1/1:0,4:4:12.04:1277,12,0	0/0:18,0:18:54.19:0,54,8055	0/0:26,0:26:78.27:0,78,12737	1/1:0,1:1:3.01:319,3,0	0/0:19,0:19:57.17:0,57,7712	1/1:0,1:1:3.01:320,3,0	0/0:19,0:19:57.20:0,57,6254	0/0:31,0:31:93.31:0,93,13091	0/0:21,0:21:63.22:0,63,9797	0/0:25,0:25:72.25:0,72,10061	0/0:21,0:21:63.18:0,63,7845	0/0:34,0:34:99:0,99,14863	0/0:32,0:32:96.29:0,96,14320	0/0:23,0:23:69.24:0,69,9131	0/0:33,0:33:96.33:0,96,12928	0/0:17,0:17:51.17:0,51,7083
chr10	101828310	.	AT	A	4506.06	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.876;DP=647;FS=1.236;HRun=1;HaplotypeScore=61.5854;InbreedingCoeff=0.9683;MQ=85.35;MQ0=0;MQRankSum=-0.776;QD=37.87;ReadPosRankSum=2.679;VQSLOD=5.4485;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.16:0,48,763	1/1:0,15:14:39.13:545,39,0	0/0:16,0:16:4.45:0,4,556	0/0:26,0:26:71.89:0,72,1064	1/1:0,39:39:99:1444,108,0	0/0:27,0:27:81.28:0,81,1292	0/0:22,0:22:66.22:0,66,1046	0/0:24,0:24:72.23:0,72,1104	0/0:25,0:25:72.23:0,72,1125	0/0:36,0:36:99:0,108,1727	0/0:26,0:26:78.25:0,78,1223	1/1:0,18:18:51.17:713,51,0	1/1:0,23:23:66.22:923,66,0	0/0:25,0:25:75.24:0,75,1173	0/0:29,0:29:87.30:0,87,1391	1/1:0,24:24:63.21:881,63,0	0/0:11,0:11:33.08:0,33,480	0/0:16,0:16:48.16:0,48,763	0/0:22,0:22:66.22:0,66,1028	0/0:37,0:37:99:0,111,1770	0/0:15,0:14:45.15:0,45,714	0/0:23,0:23:69.21:0,69,1076	0/0:19,0:19:54.17:0,54,840	0/0:19,0:19:57.19:0,57,911	0/0:26,0:26:78.24:0,78,1201	0/0:31,0:31:93.31:0,93,1465	0/0:25,0:25:75.26:0,75,1190	0/0:10,0:10:30.10:0,30,467
chr10	101828620	.	T	TTGTGTGTG	4859.91	PASS	AB=0.992;AC=16;AF=0.286;AN=56;BaseQRankSum=1.430;DP=892;FS=21.045;HRun=0;HaplotypeScore=232.3127;InbreedingCoeff=0.7705;MQ=59.63;MQ0=18;MQRankSum=-10.421;QD=17.05;ReadPosRankSum=-5.239;VQSLOD=1.8534;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:47,0:45:13.51:170,14,0	1/1:6,7:13:15.05:595,15,0	0/0:60,0:14:3.01:0,3,43	0/1:61,0:24:12.18:12,0,32	1/1:15,8:24:13.62:547,14,0	0/0:30,0:30:45.12:0,45,976	0/0:22,0:26:48.16:0,48,1055	0/1:29,0:30:19.35:19,0,461	0/0:30,0:30:60.20:0,60,1493	0/0:45,0:46:60.17:0,60,1408	0/0:15,0:17:30.08:0,30,656	1/1:23,17:41:54.15:1925,54,0	1/1:20,6:27:18.18:651,18,0	0/0:26,0:27:60.16:0,60,1342	0/0:36,0:39:76.38:0,76,1752	1/1:11,7:22:24.07:818,24,0	0/0:31,0:33:57.40:0,57,1436	1/1:16,0:16:11.99:122,12,0	0/0:31,0:30:30.10:0,30,759	0/0:29,0:29:54.17:0,54,1289	0/0:61,0:65:99:0,105,2439	0/0:26,0:31:69.24:0,69,1645	0/0:24,0:25:45.15:0,45,1064	0/0:35,0:35:63.03:0,63,1525	0/0:17,0:21:6.57:0,7,897	0/0:17,0:26:23.31:0,23,136	0/0:23,0:23:42.14:0,42,1031	0/0:2,0:13:23.38:0,23,205
chr10	101829976	.	G	GCA	3164.43	PASS	AB=0.569;AC=10;AF=0.179;AN=56;BaseQRankSum=-7.026;DP=646;FS=4.209;HRun=0;HaplotypeScore=85.2223;InbreedingCoeff=0.7159;MQ=67.69;MQ0=6;MQRankSum=1.722;QD=28.00;ReadPosRankSum=1.703;VQSLOD=4.9096;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:44:99:0,102,1109	0/1:2,6:8:34.10:266,0,34	0/0:37,0:17:25.83:0,26,258	0/0:31,0:15:9.62:0,10,138	1/1:5,23:29:56.98:884,57,0	0/0:15,0:17:44.78:0,45,477	0/0:29,0:29:74.72:0,75,842	0/0:25,0:25:54:0,54,633	0/0:20,0:20:48.15:0,48,582	0/0:20,0:22:50.44:0,50,574	0/0:27,0:27:75.22:0,75,899	1/1:3,20:23:54.18:857,54,0	0/1:4,13:17:67.08:490,0,67	0/0:13,0:14:41.96:0,42,487	0/0:14,0:15:41.96:0,42,486	1/1:6,13:19:5.74:586,6,0	0/0:32,0:32:72.20:0,72,860	1/1:9,0:17:29.44:245,29,0	0/0:17,0:17:33.10:0,33,400	0/0:22,0:23:60.02:0,60,705	0/0:24,0:26:68.87:0,69,791	0/0:20,0:22:53.83:0,54,609	0/0:20,0:20:48.14:0,48,576	0/0:23,0:23:54.15:0,54,642	0/0:31,0:32:93.12:0,93,1102	0/0:26,0:26:71.58:0,72,844	0/0:21,0:21:45.14:0,45,546	0/0:10,0:10:30.09:0,30,363
chr10	101830131	.	TACACACACACACACAC	T	1697.40	PASS	AB=0.673;AC=10;AF=0.192;AN=52;BaseQRankSum=5.980;DP=520;FS=3.071;HRun=0;HaplotypeScore=197.9370;InbreedingCoeff=0.6865;MQ=54.67;MQ0=26;MQRankSum=-4.600;QD=19.74;ReadPosRankSum=3.788;VQSLOD=2.7622;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:16:6.01:0,6,60	1/1:4,5:9:13.76:522,14,0	./.	./.	1/1:8,9:15:11.99:235,12,0	0/0:23,0:23:35.36:0,35,1874	0/0:24,0:24:42.11:0,42,1857	0/0:22,0:21:12.04:0,12,179	0/0:20,0:20:42.62:0,43,2140	0/0:25,0:23:39.09:0,39,1659	0/0:12,0:13:11.92:0,12,792	0/1:5,5:7:87.79:254,0,88	1/1:14,6:18:11.99:403,12,0	0/0:16,0:15:21.07:0,21,672	0/0:21,0:21:34.94:0,35,1603	1/1:9,2:10:13.28:346,13,0	0/0:21,0:20:45.13:0,45,2034	0/1:10,9:19:12.53:95,0,13	0/0:20,0:19:25.67:0,26,513	0/0:22,0:24:30.99:0,31,1604	0/0:21,0:20:30.10:0,30,1508	0/0:12,0:11:12.04:0,12,723	0/0:14,0:14:24.08:0,24,1286	0/0:29,0:28:47.76:0,48,2362	0/0:24,0:23:30.57:0,31,1552	0/0:18,0:17:39.07:0,39,1607	0/0:17,0:16:20.95:0,21,1095	0/0:3,0:12:15.05:0,15,991
chr10	101831403	.	C	CATG	1739.16	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.629;DP=738;FS=4.852;HRun=0;HaplotypeScore=98.6849;InbreedingCoeff=0.9958;MQ=88.44;MQ0=0;MQRankSum=-4.930;QD=49.69;ReadPosRankSum=0.700;VQSLOD=5.5239;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:35:78.27:1834,78,0	0/0:12,0:12:36.12:0,36,633	0/0:29,0:28:75.65:0,76,1239	0/0:33,0:33:85:0,85,1409	0/0:35,0:35:99:0,105,1849	0/0:30,0:30:90.24:0,90,1471	0/0:23,0:23:63.22:0,63,1111	0/0:39,0:39:99:0,108,1819	0/0:29,0:29:75.26:0,75,1323	0/0:31,0:31:90.29:0,90,1537	0/0:20,0:20:60.19:0,60,1029	0/0:28,0:28:81.25:0,81,1370	0/0:22,0:22:63.22:0,63,1111	0/0:23,0:23:69.20:0,69,1151	0/0:31,0:31:90.26:0,90,1501	0/0:29,0:29:87.27:0,87,1477	0/0:22,0:22:66.19:0,66,1128	0/0:21,0:21:60.21:0,60,1041	0/0:20,0:20:60.18:0,60,977	0/0:33,0:33:99:0,99,1659	0/0:27,0:27:78.25:0,78,1338	0/0:28,0:28:81.28:0,81,1426	0/0:21,0:21:63.20:0,63,1081	0/0:17,0:17:48.15:0,48,807	0/0:26,0:25:75.23:0,75,1260	0/0:35,0:35:99:0,102,1745	0/0:32,0:32:96.33:0,96,1688	0/0:7,0:7:21.06:0,21,342
chr10	101832179	.	GA	G	728.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.007;DP=490;FS=0.650;HRun=9;HaplotypeScore=60.5489;InbreedingCoeff=0.8505;MQ=78.48;MQ0=1;MQRankSum=-3.171;QD=22.08;ReadPosRankSum=2.139;VQSLOD=4.5046;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:90.05:823,90,0	0/0:4,0:4:12.04:0,12,138	0/0:16,0:16:41.47:0,41,438	0/0:22,0:19:17.81:0,18,273	0/0:26,0:26:63.10:0,63,692	0/0:17,0:17:51.14:0,51,578	0/0:21,0:21:60.17:0,60,683	0/0:24,1:25:35.71:0,36,657	0/0:12,0:12:36.11:0,36,415	0/0:16,0:16:42.12:0,42,485	0/0:9,0:9:24.07:0,24,277	0/0:18,0:18:54.07:0,54,580	0/0:12,0:12:36.11:0,36,415	0/0:12,0:12:36.11:0,36,415	0/0:14,0:14:39.11:0,39,443	0/0:14,0:14:36.10:0,36,415	0/0:28,0:29:81.02:0,81,882	0/0:18,1:19:8.65:0,9,353	0/0:13,0:13:27.08:0,27,311	0/0:17,0:17:48.13:0,48,543	0/0:19,0:19:54.10:0,54,596	0/0:12,0:12:27.08:0,27,312	0/0:16,0:16:42.12:0,42,484	0/0:29,0:29:75.16:0,75,833	0/0:14,0:14:39.12:0,39,450	0/0:20,0:20:51.15:0,51,585	0/0:18,1:19:20.67:0,21,483	0/0:11,1:12:8.61:0,9,340
chr10	101832208	.	CGT	C	315.48	PASS	AB=0.910;AC=18;AF=0.346;AN=52;BaseQRankSum=3.948;DP=557;FS=1.633;HRun=0;HaplotypeScore=78.1595;InbreedingCoeff=-0.3606;MQ=61.03;MQ0=13;MQRankSum=-0.608;QD=0.99;ReadPosRankSum=1.316;VQSLOD=1.6508;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:20.94:0,21,191	0/1:6,1:8:52.03:52,0,135	./.	./.	0/1:26,1:27:8.56:9,0,257	0/1:17,1:19:25.39:25,0,194	0/1:25,0:27:6.93:7,0,420	0/1:20,0:19:12.55:13,0,17	0/1:20,1:20:11.57:12,0,226	0/0:16,0:16:12.04:0,12,176	0/1:8,2:10:14.61:15,0,176	0/1:20,1:22:34.73:35,0,305	0/1:17,3:19:76.81:77,0,156	0/0:12,0:12:6.02:0,6,88	0/1:14,3:17:8.53:9,0,280	0/1:12,2:14:11.58:12,0,207	0/1:32,2:34:79.01:79,0,464	1/1:10,0:15:8.47:42,8,0	0/0:17,0:17:6.02:0,6,89	0/1:12,1:15:45.45:45,0,137	0/0:29,0:27:15.04:0,15,201	0/0:12,0:12:9.02:0,9,114	0/1:13,2:15:17.85:18,0,142	0/0:29,0:29:13.74:0,14,568	0/1:11,2:13:14.58:15,0,178	0/0:16,0:26:37.18:0,37,397	0/1:21,1:22:3.32:3,0,310	0/0:11,0:12:9.01:0,9,87
chr10	101832736	.	AG	A	301.23	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.577;DP=637;FS=1.157;HRun=4;HaplotypeScore=64.9953;InbreedingCoeff=0.9956;MQ=73.88;MQ0=1;MQRankSum=-2.984;QD=27.38;ReadPosRankSum=0.330;VQSLOD=2.7762;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1474	0/0:24,0:24:66.22:0,66,924	0/0:20,0:20:48.08:0,48,625	0/0:27,0:26:69.22:0,69,931	0/0:33,0:33:99:0,99,1368	0/0:27,0:27:78.25:0,78,1075	0/0:19,0:19:57.19:0,57,798	0/0:27,0:27:78.26:0,78,1092	0/0:22,0:22:66.22:0,66,924	0/0:22,0:22:66.22:0,66,924	0/0:26,0:26:75.23:0,75,1016	0/0:20,0:20:60.20:0,60,840	0/0:21,0:21:60.20:0,60,840	0/0:20,0:20:60.20:0,60,839	0/0:13,0:13:39.12:0,39,529	0/0:20,0:20:57.19:0,57,798	0/0:31,0:31:84.28:0,84,1175	1/1:0,11:11:33.10:396,33,0	0/0:22,0:22:60.12:0,60,766	0/0:25,0:25:72.24:0,72,1008	0/0:31,0:31:93.30:0,93,1286	0/0:22,0:22:66.22:0,66,924	0/0:19,0:19:53.75:0,54,738	0/0:16,0:16:42.14:0,42,587	0/0:22,0:21:60.20:0,60,840	0/0:27,0:27:75.25:0,75,1051	0/0:25,0:25:72.24:0,72,1006	0/0:7,0:7:21.07:0,21,290
chr10	101833088	.	AATATATAT	A	2111.27	PASS	AC=14;AF=0.269;AN=52;BaseQRankSum=3.961;DP=296;FS=3.559;HRun=0;HaplotypeScore=78.7257;InbreedingCoeff=0.7120;MQ=70.71;MQ0=0;MQRankSum=-6.493;QD=28.15;ReadPosRankSum=2.236;VQSLOD=3.0162;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,4:11:3.01:78,3,0	1/1:6,4:11:11.93:250,12,0	0/0:5,0:5:3.46:0,3,25	0/0:17,0:11:7.47:0,7,29	1/1:3,13:16:36.04:778,36,0	0/0:7,0:9:18.06:0,18,659	./.	0/0:34,0:38:75.24:0,75,2261	0/0:4,0:4:9.03:0,9,378	0/0:10,0:10:6.02:0,6,167	0/0:5,0:8:12.04:0,12,263	1/1:6,8:14:21.07:507,21,0	1/1:4,3:7:9.03:234,9,0	0/0:8,0:8:15.05:0,15,570	0/0:3,0:3:3.01:0,3,121	1/1:3,3:7:9.03:212,9,0	0/0:29,0:38:93.32:0,93,3321	1/1:4,0:9:11.36:222,11,0	0/0:9,0:9:15.05:0,15,564	0/0:7,0:7:3.01:0,3,126	0/0:4,0:4:3.01:0,3,65	./.	0/0:5,0:5:12.04:0,12,505	0/0:1,0:2:3.01:0,3,65	0/0:14,0:13:12.04:0,12,470	0/0:6,0:12:27.05:0,27,491	0/0:6,0:7:8.99:0,9,228	0/0:3,0:15:27.09:0,27,647
chr10	101833803	.	AT	A	4779.40	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=16.256;DP=713;FS=0.670;HRun=8;HaplotypeScore=71.4092;InbreedingCoeff=0.9525;MQ=70.25;MQ0=0;MQRankSum=-0.225;QD=23.78;ReadPosRankSum=3.193;VQSLOD=5.5356;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,44:45:99:1072,111,0	1/1:0,18:18:47.66:463,48,0	0/0:14,0:14:25.54:0,26,244	0/0:4,0:4:0.40:0,0,63	1/1:4,26:30:75.11:724,75,0	0/0:24,0:24:66.20:0,66,797	0/0:22,0:22:66.20:0,66,797	0/0:34,0:34:87.24:0,87,1023	0/0:28,0:28:78.24:0,78,942	0/0:44,0:44:99:0,123,1474	0/0:21,0:21:60.18:0,60,725	1/1:4,31:35:90.14:869,90,0	1/1:5,18:23:48.07:464,48,0	0/0:32,0:32:93.27:0,93,1111	0/0:32,0:32:90.28:0,90,1087	1/1:4,25:29:69.10:666,69,0	0/0:14,0:14:42.11:0,42,495	1/1:1,20:21:54.09:521,54,0	0/0:15,0:15:39.11:0,39,461	0/0:39,0:39:99:0,108,1295	0/0:20,0:20:48.13:0,48,569	0/0:36,0:36:96.29:0,96,1160	0/0:23,0:23:64.06:0,64,750	0/0:22,0:22:57.13:0,57,659	0/0:28,0:28:78.24:0,78,942	0/0:33,0:33:87.27:0,87,1051	0/0:21,0:21:54.14:0,54,629	0/0:6,0:6:15.05:0,15,181
chr10	101834426	.	TATGATGCC	T	1908.66	PASS	AB=0.510;AC=3;AF=0.054;AN=56;BaseQRankSum=8.326;DP=703;FS=7.969;HRun=0;HaplotypeScore=170.9034;InbreedingCoeff=0.4749;MQ=78.77;MQ0=0;MQRankSum=-5.394;QD=70.69;ReadPosRankSum=0.542;VQSLOD=2.9081;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,117,4990	0/0:12,0:12:33.10:0,33,1320	0/0:22,0:22:63.22:0,63,2477	0/0:14,0:14:39.13:0,39,1401	0/0:38,0:38:99:0,108,4372	0/0:28,0:28:78.27:0,78,3197	0/0:25,0:25:69.24:0,69,2888	0/0:42,0:42:99:0,117,4620	0/0:21,0:21:63.22:0,63,2562	0/0:28,0:28:78.26:0,78,3232	0/0:39,0:39:99:0,117,5071	0/0:19,0:19:57.18:0,57,2337	0/0:22,0:22:63.20:0,63,2489	0/0:20,0:20:57.18:0,57,2317	0/0:20,0:20:57.20:0,57,2504	0/0:24,0:24:69.24:0,69,2951	0/0:17,0:17:48.16:0,48,2121	0/0:19,0:19:57.20:0,57,2490	0/0:29,0:29:81.28:0,81,3314	0/0:35,0:35:99:0,105,4371	0/0:16,0:16:45.15:0,45,1830	0/0:23,0:23:66.23:0,66,2752	0/0:34,0:34:99:0,99,4252	0/0:36,0:35:99:0,99,4080	0/0:21,0:21:63.22:0,63,2792	0/1:1,25:26:54.79:1915,0,55	0/0:29,0:28:87.30:0,87,3693	1/1:0,1:1:3.01:85,3,0
chr10	101834827	.	CCA	C	540.52	PASS	AB=0.912;AC=21;AF=0.457;AN=46;BaseQRankSum=4.976;DP=591;FS=3.646;HRun=0;HaplotypeScore=131.0636;InbreedingCoeff=0.0328;MQ=56.37;MQ0=19;MQRankSum=1.171;QD=1.69;ReadPosRankSum=1.257;VQSLOD=2.4746;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:9,0:11:5.68:28,6,0	./.	./.	./.	0/0:17,0:17:15.03:0,15,200	0/0:26,0:24:18.02:0,18,231	0/0:21,0:20:4.88:0,5,17	0/1:19,2:21:43.66:44,0,147	0/0:27,0:25:20.98:0,21,269	0/1:22,0:21:15.14:15,0,72	1/1:19,0:21:5.68:28,6,0	1/1:13,0:16:8.52:42,9,0	0/1:19,2:21:20.18:20,0,106	0/1:22,7:29:17.20:17,0,154	1/1:18,2:24:23.12:157,23,0	0/1:17,4:19:99:134,0,149	1/1:7,0:12:5.30:28,5,0	0/1:19,0:16:12.51:13,0,15	0/0:19,0:19:8.07:0,8,186	0/1:33,0:33:68.31:68,0,204	0/0:24,0:24:9.01:0,9,104	0/0:20,0:20:6.02:0,6,88	0/1:35,3:38:51.57:52,0,443	0/0:17,0:17:2.04:0,2,6	1/1:17,0:17:2.84:14,3,0	0/1:10,1:12:34.31:34,0,77	./.
chr10	101834887	.	T	TCACACACGTGTGCACC	1905.65	PASS	AB=0.862;AC=9;AF=0.161;AN=56;BaseQRankSum=3.421;DP=802;FS=25.552;HRun=0;HaplotypeScore=385.1659;InbreedingCoeff=0.5673;MQ=49.73;MQ0=12;MQRankSum=-5.764;QD=14.22;ReadPosRankSum=-2.911;VQSLOD=0.7641;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,11:29:15.78:103,16,0	0/1:12,0:12:99:384,0,141	0/0:42,0:23:35.93:0,36,824	0/0:51,0:26:36.06:0,36,706	0/1:24,0:24:35.46:35,0,67	0/0:19,0:19:27.01:0,27,1032	0/0:34,0:34:66.57:0,67,2657	0/0:34,0:34:57.08:0,57,1427	0/0:24,0:24:27.09:0,27,1133	0/0:35,0:35:87.21:0,87,2788	0/0:23,0:23:22:0,22,784	0/1:7,12:24:99:223,0,103	1/1:21,0:20:42.03:991,42,0	0/0:23,0:23:30:0,30,1015	0/0:32,0:32:33.57:0,34,1239	1/1:11,9:24:11.60:324,12,0	0/0:24,0:24:45.15:0,45,1702	0/0:20,0:20:42.09:0,42,1386	0/0:18,0:18:29.93:0,30,1087	0/0:24,0:24:36.59:0,37,1282	0/0:66,0:65:99:0,103,3747	0/0:35,0:35:31.29:0,31,1316	0/0:32,0:32:41.97:0,42,1488	0/0:48,0:48:79.88:0,80,3190	0/0:25,0:25:39.13:0,39,1408	0/0:29,0:29:81.12:0,81,2973	0/0:25,0:25:45.01:0,45,1564	0/0:4,0:4:6.02:0,6,266
chr10	101835706	.	AAAAC	A	2652.98	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.821;DP=569;FS=1.123;HRun=0;HaplotypeScore=94.8221;InbreedingCoeff=0.9776;MQ=57.54;MQ0=3;MQRankSum=-3.973;QD=31.21;ReadPosRankSum=2.062;VQSLOD=3.7204;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:65.41:0,65,1511	1/1:1,7:8:12.04:207,12,0	0/0:17,0:9:10.12:0,10,470	0/0:22,0:17:32.77:0,33,757	1/1:4,25:29:57.19:970,57,0	0/0:21,0:21:63.21:0,63,1400	0/0:14,0:14:36.10:0,36,798	0/0:24,0:24:39.13:0,39,972	0/0:10,0:10:27.07:0,27,607	0/0:27,0:27:72.21:0,72,1718	0/0:27,0:27:60.19:0,60,1384	1/1:3,12:15:30.10:519,30,0	1/1:3,15:18:33.11:571,33,0	0/0:20,0:20:54.19:0,54,1321	0/0:13,0:13:30.10:0,30,695	1/1:2,13:15:33.11:559,33,0	0/0:27,0:27:72.25:0,72,1732	0/0:22,0:22:63.21:0,63,1461	0/0:15,0:15:36.12:0,36,891	0/0:35,0:35:90.26:0,90,2208	0/0:30,0:30:90.29:0,90,2147	0/0:16,0:16:33.11:0,33,787	0/0:13,0:13:39.13:0,39,901	0/0:22,0:22:51.17:0,51,1244	0/0:16,0:16:45.09:0,45,917	0/0:27,0:27:66.22:0,66,1545	0/0:27,0:27:72.22:0,72,1667	0/0:6,0:6:15.05:0,15,377
chr10	101836292	.	A	AT	1653.72	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.241;DP=527;FS=8.649;HRun=1;HaplotypeScore=49.1255;InbreedingCoeff=0.9932;MQ=76.57;MQ0=0;MQRankSum=-4.334;QD=34.45;ReadPosRankSum=2.482;VQSLOD=2.9598;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:51.17:764,51,0	0/0:7,0:7:21.07:0,21,272	0/0:17,0:16:42.12:0,42,524	0/0:20,0:20:54.17:0,54,693	0/0:22,0:22:63.19:0,63,802	0/0:20,0:20:57.17:0,57,726	0/0:19,0:19:57.18:0,57,729	0/0:34,0:34:96.31:0,96,1246	0/0:17,0:17:51.17:0,51,661	0/0:24,0:24:69.22:0,69,885	0/0:16,0:16:45.15:0,45,584	0/0:10,0:10:30.10:0,30,389	0/0:18,0:18:51.15:0,51,646	0/0:22,0:22:63.20:0,63,816	0/0:18,0:18:54.18:0,54,701	0/0:15,0:15:45.15:0,45,584	0/0:14,0:14:39.13:0,39,506	1/1:0,25:25:69.21:1011,69,0	0/0:19,0:19:57.18:0,57,739	0/0:15,0:15:45.15:0,45,584	0/0:21,0:21:60.19:0,60,779	0/0:11,0:11:33.11:0,33,428	0/0:6,0:6:18.06:0,18,234	0/0:12,0:12:33.09:0,33,412	0/0:31,0:31:90.27:0,90,1153	0/0:18,0:17:48.16:0,48,622	0/0:34,0:34:99:0,102,1308	0/0:19,0:19:48.16:0,48,623
chr10	101836554	.	TTCTC	T	462.19	PASS	AB=0.977;AC=14;AF=0.280;AN=50;BaseQRankSum=4.417;DP=628;FS=21.776;HRun=0;HaplotypeScore=123.4515;InbreedingCoeff=0.5531;MQ=66.36;MQ0=17;MQRankSum=-1.798;QD=3.35;ReadPosRankSum=2.295;VQSLOD=1.0211;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:7,1:13:2.90:28,3,0	./.	./.	1/1:12,12:26:5.53:18,6,0	0/0:26,0:26:12.04:0,12,197	0/0:20,0:20:18.53:0,19,290	0/0:34,0:32:6.02:0,6,70	0/0:28,0:29:24.07:0,24,366	0/0:29,0:29:27.94:0,28,509	0/0:20,0:27:15.03:0,15,190	1/1:12,6:18:8.99:84,9,0	1/1:6,5:13:22.16:274,22,0	0/0:14,0:14:8.98:0,9,136	0/0:26,0:26:27.56:0,28,511	1/1:10,7:20:10.21:106,10,0	0/0:14,0:21:12.02:0,12,193	1/1:6,0:6:5.99:65,6,0	0/0:17,0:19:13.01:0,13,265	0/0:27,0:26:6.02:0,6,115	0/1:20,1:19:31.25:31,0,205	0/1:20,0:20:14.40:14,0,239	0/0:21,0:19:3.01:0,3,49	0/0:25,0:27:27.54:0,28,487	0/0:23,0:20:9.03:0,9,167	0/0:37,0:35:51.09:0,51,823	0/0:14,0:20:3.01:0,3,48	0/0:14,0:13:5.99:0,6,65
chr10	101838223	.	G	GA	4010.71	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-5.903;DP=637;FS=5.256;HRun=8;HaplotypeScore=60.4463;InbreedingCoeff=0.9990;MQ=75.24;MQ0=0;MQRankSum=-1.144;QD=29.28;ReadPosRankSum=1.004;VQSLOD=4.0452;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:93.28:1071,93,0	1/1:1,8:9:24.07:277,24,0	0/0:17,0:17:34.82:0,35,307	0/0:16,0:16:32.61:0,33,291	1/1:2,17:19:45.09:505,45,0	0/0:23,0:23:63.03:0,63,577	0/0:29,0:29:72:0,72,649	0/0:26,0:26:69.01:0,69,622	0/0:21,0:21:53.95:0,54,481	0/0:34,0:34:96.04:0,96,878	0/0:25,0:25:69.04:0,69,631	1/1:4,16:20:48.14:554,48,0	1/1:4,19:23:35.72:663,36,0	0/0:26,0:26:68.99:0,69,624	0/0:23,0:23:66.04:0,66,604	1/1:4,16:20:23.68:526,24,0	0/0:31,0:31:78.03:0,78,714	1/1:1,12:13:36.11:415,36,0	0/0:20,0:20:48.01:0,48,435	0/0:35,0:35:99:0,99,899	0/0:19,0:19:51.01:0,51,462	0/0:23,0:23:63.03:0,63,577	0/0:26,0:26:69.04:0,69,632	0/0:23,0:23:62.98:0,63,568	0/0:26,0:26:72.04:0,72,659	0/0:25,0:25:75.01:0,75,677	0/0:22,0:22:60.01:0,60,543	0/0:10,0:10:30.02:0,30,275
chr10	101838764	.	G	GA	2455.15	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-9.077;DP=637;FS=0.885;HRun=9;HaplotypeScore=62.9842;InbreedingCoeff=0.9782;MQ=71.95;MQ0=0;MQRankSum=-0.604;QD=24.55;ReadPosRankSum=2.020;VQSLOD=4.4559;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:71.97:0,72,625	1/1:1,4:5:12.03:133,12,0	0/0:14,0:10:23.76:0,24,189	0/0:12,0:11:17.98:0,18,156	1/1:2,32:36:95.88:1011,96,0	0/0:20,0:19:53.99:0,54,469	0/0:23,0:24:58.98:0,59,497	0/0:28,2:30:41.76:0,42,587	0/0:20,0:20:50.98:0,51,443	0/0:27,0:27:80.97:0,81,699	0/0:30,0:30:80.95:0,81,696	1/1:2,15:18:41.95:446,42,0	1/1:3,14:17:10.04:339,10,0	0/0:21,0:21:53.99:0,54,469	0/0:26,0:26:71.98:0,72,625	1/1:2,22:23:63.17:697,63,0	0/0:24,0:24:65.99:0,66,573	0/0:24,0:24:56.98:0,57,495	0/0:24,0:24:56.97:0,57,495	0/0:29,0:29:80.98:0,81,703	0/0:20,0:20:53.95:0,54,461	0/0:22,0:22:65.98:0,66,570	0/0:24,0:24:35.81:0,36,540	0/0:25,1:26:26.79:0,27,462	0/0:21,0:21:56.96:0,57,491	0/0:6,0:35:58.88:0,59,189	0/0:23,0:24:36.44:0,36,492	0/0:0,0:12:22.41:0,22,66
chr10	101840646	.	G	GGA	43.51	PASS	AB=0.710;AC=5;AF=0.096;AN=52;BaseQRankSum=2.802;DP=119;FS=0.000;HRun=0;HaplotypeScore=53.4575;InbreedingCoeff=0.0682;MQ=90.92;MQ0=1;MQRankSum=-1.281;QD=3.35;ReadPosRankSum=0.753;VQSLOD=0.9567;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:3,2:5:23.50:34,0,24	./.	0/0:10,0:9:21.58:0,22,203	0/0:15,0:12:11.20:0,11,109	1/1:0,1:1:3.01:34,3,0	0/0:3,0:3:8.96:0,9,69	0/0:2,0:2:5.97:0,6,44	0/0:2,0:2:5.93:0,6,40	0/0:4,0:3:8.30:0,8,49	0/0:9,0:9:26.79:0,27,198	0/0:6,0:6:11.94:0,12,91	0/0:1,0:1:2.22:0,2,7	0/0:1,0:1:2.74:0,3,12	0/0:3,0:3:8.98:0,9,72	0/0:5,0:5:11.91:0,12,88	./.	0/0:6,0:6:11.13:0,11,69	0/0:1,0:1:2.98:0,3,21	0/0:4,0:3:8.90:0,9,61	0/0:6,0:6:11.94:0,12,90	0/0:6,0:4:6.06:0,6,34	0/0:6,0:7:13.69:0,14,90	0/0:6,0:6:17.92:0,18,138	0/0:3,0:3:5:0,5,30	0/0:3,0:3:8.97:0,9,71	0/1:2,2:4:30.43:58,0,30	0/0:3,0:3:8.93:0,9,65	0/1:2,1:3:24.49:24,0,26
chr10	101840651	.	G	GGA	217.51	PASS	AB=0.869;AC=14;AF=0.259;AN=54;BaseQRankSum=3.625;DP=145;FS=0.000;HRun=0;HaplotypeScore=64.5507;InbreedingCoeff=0.1503;MQ=86.38;MQ0=1;MQRankSum=-1.326;QD=5.72;ReadPosRankSum=-1.541;VQSLOD=2.4186;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:4,2:6:18.07:52,0,18	1/1:1,0:1:3.01:36,3,0	0/0:10,0:9:25.30:0,25,293	0/0:16,0:13:14.05:0,14,155	1/1:1,1:2:3.01:38,3,0	0/0:4,0:4:7.22:0,7,80	0/0:6,0:6:5.41:0,5,45	0/0:4,0:4:8.97:0,9,69	0/0:4,0:3:3:0,3,30	0/0:11,0:11:9.11:0,9,207	0/0:6,0:6:11.94:0,12,104	1/1:3,0:3:8.01:52,8,0	1/1:2,0:2:2.37:8,2,0	0/0:4,0:4:9.90:0,10,88	0/1:5,0:5:5.02:5,0,74	./.	0/0:9,0:9:7.91:0,8,67	0/0:1,0:1:3:0,3,26	0/0:6,0:5:8.29:0,8,75	0/0:7,0:7:10.31:0,10,105	0/0:6,0:4:6.07:0,6,38	0/1:7,0:7:18.41:18,0,79	0/0:7,0:7:18.02:0,18,166	0/1:4,0:4:13.80:14,0,27	0/0:3,0:3:9.01:0,9,83	0/1:3,2:5:36.69:108,0,37	0/0:3,0:3:9:0,9,79	0/1:2,1:3:29.54:31,0,30
chr10	101840680	.	GTAA	G	154.40	PASS	AB=0.941;AC=11;AF=0.204;AN=54;BaseQRankSum=3.925;DP=226;FS=0.000;HRun=0;HaplotypeScore=79.6165;InbreedingCoeff=-0.1175;MQ=69.74;MQ0=1;MQRankSum=-3.834;QD=2.17;ReadPosRankSum=-2.213;VQSLOD=1.2203;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:7:35.41:75,0,35	0/0:2,0:2:3.01:0,3,56	0/1:11,0:3:5.12:5,0,44	0/0:16,0:10:11.28:0,11,107	0/1:4,0:4:4.79:5,0,120	0/0:9,0:9:18.06:0,18,323	0/1:8,1:9:25.66:26,0,344	0/0:12,0:12:18.59:0,19,387	0/0:9,0:8:24.01:0,24,375	0/0:21,1:22:7.36:0,7,887	0/0:10,0:10:27.01:0,27,404	0/0:5,0:5:3.17:0,3,116	1/1:0,2:2:5.61:66,6,0	0/0:7,0:7:15.04:0,15,229	0/1:10,1:11:24.14:24,0,299	0/0:3,0:2:6.88:0,7,57	0/0:10,0:10:4:0,4,388	0/0:1,0:1:3.01:0,3,51	0/0:10,0:9:21.56:0,22,374	0/1:9,1:10:18.09:18,0,410	0/0:8,0:6:8.96:0,9,115	0/0:10,0:10:26.93:0,27,382	0/0:15,1:16:45.15:0,45,775	0/1:3,0:3:6.12:6,0,43	0/1:7,1:8:30.13:30,0,188	0/1:5,1:6:34.57:35,0,175	0/0:5,0:5:11.94:0,12,159	./.
chr10	101840704	.	G	GAGAAA	329.17	PASS	AB=0.893;AC=6;AF=0.107;AN=56;BaseQRankSum=5.725;DP=325;FS=1.541;HRun=0;HaplotypeScore=120.1365;InbreedingCoeff=-0.1582;MQ=50.71;MQ0=5;MQRankSum=-2.989;QD=6.86;ReadPosRankSum=-3.981;VQSLOD=1.1088;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:33.11:0,33,726	0/1:4,0:4:55.06:55,0,129	0/0:31,0:3:9.03:0,9,155	0/0:33,0:8:2.33:0,2,173	0/1:4,2:6:43.92:44,0,198	0/1:19,0:19:52.75:53,0,532	0/0:14,0:14:27.08:0,27,504	0/0:14,0:14:36.02:0,36,751	0/0:8,0:8:24.07:0,24,479	0/0:20,0:20:17.85:0,18,1064	0/0:8,0:8:24.08:0,24,550	0/1:5,1:6:99:140,0,128	0/0:3,0:3:6.02:0,6,94	0/0:8,0:8:15:0,15,283	0/0:16,0:16:33.09:0,33,667	0/1:4,2:5:75.30:142,0,75	0/0:14,0:14:28.13:0,28,566	0/0:3,0:3:6.02:0,6,138	0/0:10,0:9:24.08:0,24,517	0/0:13,0:13:35.11:0,35,668	0/0:11,0:9:18.06:0,18,419	0/0:14,0:14:6.17:0,6,590	0/0:19,0:19:35.53:0,36,867	0/0:12,0:12:10.21:0,10,540	0/0:8,0:8:12.04:0,12,221	0/1:7,0:7:17.90:18,0,212	0/0:6,0:6:14.75:0,15,258	0/0:1,0:1:3.01:0,3,70
chr10	101840706	.	A	AGGAG	1359.52	PASS	AB=0.897;AC=14;AF=0.250;AN=56;BaseQRankSum=4.560;DP=334;FS=17.610;HRun=0;HaplotypeScore=107.4250;InbreedingCoeff=-0.3395;MQ=48.42;MQ0=7;MQRankSum=-5.632;QD=8.44;ReadPosRankSum=-2.016;VQSLOD=1.1847;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:30.99:0,31,534	0/0:4,0:4:12.02:0,12,188	0/0:35,0:3:9.03:0,9,147	0/0:31,0:7:14.89:0,15,181	0/0:6,0:6:11.26:0,11,193	0/1:18,1:19:99:140,0,416	0/1:12,2:14:99:118,0,379	0/0:16,0:16:42.08:0,42,613	0/1:6,2:8:99:106,0,314	0/1:16,2:19:99:189,0,794	0/0:9,0:9:24.04:0,24,419	0/0:5,0:5:2.04:0,2,107	0/1:3,0:3:4.95:44,0,5	0/1:7,1:8:40.74:41,0,208	0/1:13,2:15:99:121,0,434	0/1:7,0:6:45.93:46,0,73	0/0:14,0:14:15.25:0,15,496	0/0:3,0:3:5.93:0,6,73	0/0:12,0:9:18.53:0,19,349	0/1:9,4:13:99:225,0,433	0/0:12,0:10:18.06:0,18,341	0/1:13,1:14:99:159,0,452	0/1:20,1:21:80.73:81,0,662	0/0:11,0:12:24.29:0,24,484	0/1:6,1:7:68.29:68,0,153	0/1:6,1:7:99:109,0,150	0/1:5,1:6:65.65:66,0,148	0/0:1,0:1:3.01:0,3,57
chr10	101840716	.	AAG	A	105.59	PASS	AB=0.957;AC=10;AF=0.179;AN=56;BaseQRankSum=4.700;DP=393;FS=2.086;HRun=0;HaplotypeScore=116.5048;InbreedingCoeff=-0.1194;MQ=46.58;MQ0=8;MQRankSum=-5.567;QD=1.19;ReadPosRankSum=-5.523;VQSLOD=0.5970;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:8.12:8,0,649	0/0:6,0:6:2.19:0,2,151	0/0:31,0:3:6.02:0,6,78	0/0:31,0:6:12.25:0,12,147	0/1:10,0:10:68.86:69,0,129	0/0:20,0:20:7.56:0,8,442	0/0:14,0:14:30.08:0,30,443	0/0:18,0:18:45.13:0,45,709	0/1:8,5:12:42.75:43,0,383	0/0:24,0:24:50.42:0,50,1016	0/1:10,0:10:5.13:5,0,390	0/1:9,0:9:22.42:22,0,95	0/1:9,0:9:28.67:47,0,29	0/0:7,0:7:15.05:0,15,233	0/0:18,0:18:27.90:0,28,545	0/0:9,0:9:1.55:0,2,133	0/1:14,1:15:7.78:8,0,455	1/1:2,0:2:2.49:7,2,0	0/0:12,0:8:1.95:0,2,286	0/0:16,0:16:3.79:0,4,549	0/0:13,0:12:18.06:0,18,311	0/0:19,0:19:12.45:0,12,558	0/0:20,0:20:36.17:0,36,695	0/0:15,0:15:21.07:0,21,477	0/0:7,0:7:12.04:0,12,198	0/0:12,0:12:15.95:0,16,329	0/0:9,0:8:10.44:0,10,166	0/1:6,0:6:25.55:26,0,41
chr10	101840741	.	A	AAAGG	5071.06	PASS	AB=0.956;AC=36;AF=0.643;AN=56;BaseQRankSum=-0.904;DP=448;FS=30.179;HRun=0;HaplotypeScore=116.7752;InbreedingCoeff=0.2736;MQ=51.25;MQ0=13;MQRankSum=-0.421;QD=13.49;ReadPosRankSum=3.663;VQSLOD=2.7645;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:42.03:0,42,616	0/1:11,0:11:13.47:13,0,75	0/0:12,0:1:2.99:0,3,24	0/0:14,0:4:2.15:0,2,20	0/1:13,0:13:59.01:76,0,59	1/1:7,15:24:21.84:362,22,0	1/1:2,10:14:15.05:372,15,0	1/1:19,0:17:3.54:133,4,0	1/1:17,0:15:32.78:371,33,0	0/1:24,0:24:10.33:10,0,408	0/1:14,0:13:3.69:4,0,196	0/1:11,0:11:27.38:99,0,27	0/1:12,0:12:49.17:51,0,49	1/1:2,12:15:12:243,12,0	1/1:5,14:20:14.94:314,15,0	0/1:15,0:15:31.82:52,0,32	1/1:8,15:25:15.01:277,15,0	0/0:4,0:4:8.96:0,9,88	1/1:11,11:17:35.90:436,36,0	1/1:5,11:17:41.70:496,42,0	1/1:4,14:18:6.02:149,6,0	1/1:7,13:20:27.09:409,27,0	1/1:17,2:19:28.82:497,29,0	1/1:3,22:25:14.16:545,14,0	1/1:3,6:9:4.26:78,4,0	0/0:15,0:14:7.29:0,7,143	0/1:5,5:10:2.17:82,0,2	0/0:10,0:9:7.18:0,7,66
chr10	101841685	.	AGT	A	484.62	PASS	AB=0.968;AC=14;AF=0.259;AN=54;BaseQRankSum=8.651;DP=705;FS=1.954;HRun=0;HaplotypeScore=97.6669;InbreedingCoeff=0.2228;MQ=64.58;MQ0=12;MQRankSum=-1.199;QD=1.80;ReadPosRankSum=1.335;VQSLOD=2.0472;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:22:12.52:22,0,13	./.	0/0:34,0:23:21.26:0,21,209	0/0:29,0:16:12.86:0,13,125	0/1:19,0:18:12.51:53,0,13	0/0:22,0:21:30.06:0,30,416	0/1:26,1:20:9.12:9,0,335	0/1:23,1:23:36.18:36,0,428	0/0:21,0:19:36.09:0,36,506	0/1:37,2:38:17.81:18,0,1163	0/0:23,0:23:41.91:0,42,568	1/1:24,0:22:23.48:163,23,0	1/1:18,0:17:17.81:140,18,0	0/0:29,0:29:26.61:0,27,802	0/0:23,1:23:14.94:0,15,670	0/1:23,0:23:46.32:116,0,46	0/0:35,1:35:30.28:0,30,1083	0/0:18,0:23:42.51:0,43,362	0/0:23,1:21:5.88:0,6,482	0/1:20,1:21:0.07:0,0,490	0/0:64,0:56:99:0,108,2104	0/1:20,2:22:24.26:24,0,594	0/0:25,2:27:17.98:0,18,742	0/0:27,0:26:60.20:0,60,952	0/0:27,1:26:60.19:0,60,931	1/1:28,0:26:14.85:66,15,0	0/0:17,0:17:6.12:0,6,588	0/0:3,0:3:2.92:0,3,22
chr10	101841698	.	GTGTGTGTC	G	677.49	PASS	AB=0.990;AC=10;AF=0.179;AN=56;BaseQRankSum=4.339;DP=770;FS=4.828;HRun=0;HaplotypeScore=175.5006;InbreedingCoeff=0.2207;MQ=49.19;MQ0=43;MQRankSum=-6.902;QD=4.26;ReadPosRankSum=-5.641;VQSLOD=0.7411;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:19,5:22:23.80:396,24,0	1/1:5,0:4:2.96:19,3,0	0/0:37,0:12:17.80:0,18,206	0/0:36,0:11:14.11:0,14,194	0/1:19,0:17:11.93:12,0,148	0/0:24,0:20:39.59:0,40,1390	0/0:31,0:23:32.14:0,32,1066	0/0:29,0:26:51.15:0,51,1241	0/0:24,0:21:45.01:0,45,1218	0/0:42,0:37:99:0,105,2628	0/0:19,0:18:38.48:0,38,1168	0/1:22,0:18:10.56:11,0,339	0/1:20,0:18:34.34:34,0,308	0/0:27,0:25:56.83:0,57,1776	0/0:26,0:21:56.99:0,57,1667	0/0:22,0:20:15.21:0,15,442	0/0:45,0:41:50.71:0,51,2991	0/1:29,0:27:70.07:70,0,823	0/0:31,0:22:41.89:0,42,1233	0/0:18,0:18:36.12:0,36,1034	0/0:78,0:66:99:0,146,5899	0/0:20,0:18:47.94:0,48,1366	0/0:27,0:25:63.11:0,63,1392	0/0:32,0:30:72.08:0,72,2307	0/0:28,0:26:69.18:0,69,2271	0/1:34,1:29:35.86:268,0,36	0/0:15,0:15:45.15:0,45,1568	0/1:4,0:4:13.02:14,0,13
chr10	101841729	.	CTG	C	62.87	PASS	AB=1.000;AC=7;AF=0.140;AN=50;BaseQRankSum=5.807;DP=875;FS=16.778;HRun=0;HaplotypeScore=114.5515;InbreedingCoeff=0.5365;MQ=39.49;MQ0=136;MQRankSum=-1.379;QD=0.83;ReadPosRankSum=0.492;VQSLOD=0.9753;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,2:22:0.57:2,1,0	./.	./.	./.	1/1:10,0:7:3.90:39,4,0	0/0:34,0:27:48.15:0,48,746	0/0:42,0:26:31.74:0,32,506	0/0:40,0:28:39.60:0,40,596	0/0:32,0:22:40.18:0,40,641	0/0:54,0:36:55.40:0,55,788	0/0:16,0:12:15.05:0,15,226	0/0:19,1:11:3:0,3,25	0/1:22,0:15:14.19:45,0,14	0/0:26,0:21:29.96:0,30,445	0/0:25,0:17:21.07:0,21,339	1/1:20,0:15:11.65:87,12,0	0/0:46,0:40:72.32:0,72,1164	0/0:26,0:19:28.60:0,29,486	0/0:31,1:17:1.26:0,1,503	0/0:14,0:11:6.02:0,6,96	0/0:111,0:93:99:0,197,3215	0/0:19,0:14:30.10:0,30,449	0/0:28,0:20:24.05:0,24,355	0/0:42,0:34:21.08:0,21,806	0/0:32,0:29:48.16:0,48,759	0/0:32,0:20:12.17:0,12,189	0/0:15,0:15:23.96:0,24,300	0/0:3,0:3:0.47:0,0,1
chr10	101841756	.	GGT	G	542.68	PASS	AB=0.929;AC=15;AF=0.288;AN=52;BaseQRankSum=7.742;DP=788;FS=0.632;HRun=0;HaplotypeScore=106.5272;InbreedingCoeff=0.4405;MQ=38.85;MQ0=147;MQRankSum=-0.596;QD=3.07;ReadPosRankSum=-2.064;VQSLOD=2.0032;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:20:2.14:36,2,0	1/1:4,0:2:3.01:33,3,0	./.	./.	1/1:10,2:7:2.75:37,3,0	0/0:35,0:28:15.24:0,15,741	0/0:45,0:29:63.24:0,63,861	0/0:30,0:23:26.80:0,27,377	0/0:31,0:21:38.99:0,39,562	0/0:35,1:22:2.01:0,2,466	0/0:16,0:11:9.03:0,9,147	0/1:20,4:12:14.13:156,0,14	0/1:25,1:15:45.78:46,0,93	0/0:20,0:15:33.10:0,33,512	0/0:22,0:15:25.85:0,26,406	1/1:16,5:15:3.97:67,4,0	0/0:32,0:26:45.75:0,46,812	1/1:29,0:20:8.58:219,9,0	0/0:30,0:21:2.56:0,3,477	0/0:15,0:12:19.31:0,19,298	0/0:124,0:101:99:0,120,2538	0/0:12,0:8:21.07:0,21,326	0/0:18,0:13:24.13:0,24,325	0/0:49,0:37:43.96:0,44,1014	0/0:26,0:21:29.55:0,30,398	0/1:30,0:17:63:63,0,93	0/0:9,0:9:9.02:0,9,104	1/1:5,0:5:2.97:38,3,0
chr10	101841771	.	GGT	G	182.77	PASS	AB=0.971;AC=5;AF=0.096;AN=52;BaseQRankSum=5.145;DP=739;FS=0.000;HRun=0;HaplotypeScore=113.3011;InbreedingCoeff=0.2281;MQ=41.50;MQ0=106;MQRankSum=-2.513;QD=2.13;ReadPosRankSum=-0.016;VQSLOD=2.1949;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,2:22:25.05:0,25,299	0/0:6,0:5:6.85:0,7,61	./.	./.	0/0:13,1:10:8.82:0,9,104	0/0:36,0:30:60.64:0,61,832	0/0:48,0:30:66.18:0,66,1015	0/0:34,0:28:53.77:0,54,693	0/0:25,0:20:3.43:0,3,473	0/0:32,0:22:48:0,48,639	0/0:14,0:11:15.05:0,15,244	0/0:30,1:19:25.18:0,25,212	0/0:21,1:12:3.68:0,4,121	0/0:18,0:15:33.11:0,33,523	0/0:22,0:18:21.07:0,21,342	0/1:16,1:15:22.96:23,0,51	0/0:28,0:24:33.41:0,33,639	1/1:18,5:18:20.85:248,21,0	0/0:28,0:19:33.69:0,34,476	0/1:16,0:12:11.83:12,0,313	0/0:116,1:97:71.48:0,71,2466	0/0:14,0:11:27.09:0,27,414	0/0:13,0:10:23.87:0,24,351	0/0:52,0:43:72.06:0,72,1300	0/0:27,0:21:36.01:0,36,527	0/1:26,1:17:18.23:18,0,337	0/0:7,0:7:6.01:0,6,92	0/0:5,1:5:8.06:0,8,95
chr10	101841925	.	CGT	C	588.63	PASS	AB=0.855;AC=11;AF=0.204;AN=54;BaseQRankSum=6.574;DP=1003;FS=3.200;HRun=0;HaplotypeScore=148.1452;InbreedingCoeff=0.5939;MQ=52.29;MQ0=33;MQRankSum=0.233;QD=4.75;ReadPosRankSum=2.293;VQSLOD=3.2597;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:32.69:0,33,494	1/1:4,3:5:5.83:65,6,0	0/0:54,0:6:5.81:0,6,56	0/0:54,0:10:24.04:0,24,317	1/1:8,10:18:21.03:235,21,0	0/1:23,2:25:64.05:64,0,626	0/0:45,0:44:96.30:0,96,1507	0/0:48,0:47:99:0,111,1778	0/0:46,0:45:96.81:0,97,1794	0/0:58,0:57:99:0,144,2250	0/0:20,0:20:48.14:0,48,749	1/1:14,11:24:17.95:220,18,0	0/1:6,9:16:4.75:108,0,5	0/0:43,0:43:99:0,105,1720	0/0:32,0:32:57.19:0,57,952	1/1:7,8:12:3.01:39,3,0	0/0:40,1:41:64.34:0,64,1566	0/1:18,0:18:13.36:13,0,234	0/0:21,0:14:36.11:0,36,569	0/0:18,2:20:12.76:0,13,767	0/0:139,0:137:99:0,314,5624	0/0:33,0:32:81.21:0,81,1299	0/0:29,0:29:78.22:0,78,1210	0/0:64,0:64:99:0,153,2483	0/0:24,1:25:24.60:0,25,946	0/0:40,0:35:79.59:0,80,1232	0/0:29,0:28:79.83:0,80,1198	./.
chr10	101841950	.	C	CTGTG	1753.56	PASS	AB=0.829;AC=16;AF=0.286;AN=56;BaseQRankSum=7.325;DP=1089;FS=1.133;HRun=0;HaplotypeScore=195.6294;InbreedingCoeff=0.7596;MQ=49.10;MQ0=51;MQRankSum=-1.661;QD=10.14;ReadPosRankSum=-2.998;VQSLOD=2.7000;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,9:23:14.58:281,15,0	1/1:6,0:4:2.86:57,3,0	0/0:72,0:3:6.02:0,6,86	0/0:64,0:2:3:0,3,43	1/1:10,8:18:9.01:175,9,0	0/0:30,0:30:61.34:0,61,1023	0/0:47,0:44:96.18:0,96,1570	0/0:55,0:55:99:0,123,1989	0/0:51,0:50:81.21:0,81,1565	0/0:58,0:56:99:0,120,2020	0/0:20,0:19:36.07:0,36,613	1/1:19,9:24:14.74:161,15,0	1/1:13,4:14:13.85:186,14,0	0/0:45,0:45:99:0,111,1828	0/0:43,0:43:78.14:0,78,1259	0/1:13,4:13:0.02:0,0,0	0/0:43,0:42:86.66:0,87,1648	1/1:17,0:17:32.22:335,32,0	0/0:29,0:17:42.13:0,42,696	0/0:21,0:21:39:0,39,621	0/0:143,0:141:99:0,330,5752	0/0:40,0:40:89.09:0,89,1439	0/0:33,0:33:83.27:0,83,1336	0/0:64,0:62:99:0,146,2450	0/0:32,0:32:62.15:0,62,993	0/1:32,7:32:9.21:731,0,9	0/0:25,0:24:45.13:0,45,733	1/1:4,0:2:0.47:1,0,0
chr10	101841972	.	C	CGT	1171.76	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=9.327;DP=1043;FS=2.140;HRun=0;HaplotypeScore=153.2573;InbreedingCoeff=0.8398;MQ=48.04;MQ0=49;MQRankSum=-3.373;QD=8.08;ReadPosRankSum=-1.531;VQSLOD=3.2808;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,12:16:6.02:101,6,0	0/0:1,1:2:0.47:0,0,1	0/0:68,0:4:11.96:0,12,115	0/0:68,0:1:3.01:0,3,37	1/1:12,8:15:6.02:101,6,0	0/0:28,0:28:56.97:0,57,722	0/0:44,0:40:84.23:0,84,1040	0/0:55,0:51:99:0,116,1399	0/0:49,0:47:99:0,107,1381	0/0:55,0:51:99:0,120,1496	0/0:22,0:22:35.98:0,36,544	1/1:14,17:21:9.03:152,9,0	1/1:11,9:13:9:125,9,0	0/0:40,0:40:82.07:0,82,1114	0/0:44,0:44:82.79:0,83,1021	1/1:8,6:9:3.01:36,3,0	0/0:50,0:48:99:0,109,1354	1/1:16,4:19:18.59:411,19,0	0/0:30,0:13:33.09:0,33,408	0/0:31,0:31:79.88:0,80,947	0/0:133,0:129:99:0,295,3601	0/0:34,0:33:86.04:0,86,1034	0/0:28,0:28:63.20:0,63,803	0/0:66,0:63:99:0,141,1777	0/0:28,0:27:38.23:0,38,714	1/1:8,9:14:32.79:418,33,0	0/0:18,0:18:35.85:0,36,449	./.
chr10	101842033	.	C	CTG	1178.69	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=8.670;DP=994;FS=0.629;HRun=0;HaplotypeScore=135.6264;InbreedingCoeff=0.9020;MQ=51.28;MQ0=40;MQRankSum=-0.683;QD=8.02;ReadPosRankSum=-1.869;VQSLOD=2.8800;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,16:23:12.01:173,12,0	1/1:3,1:3:3:25,3,0	0/0:30,0:4:5.38:0,5,48	0/0:34,0:7:8.55:0,9,87	1/1:6,8:9:12.04:200,12,0	0/0:24,0:24:42.21:0,42,591	0/0:43,0:43:83.50:0,84,1250	0/0:62,0:61:99:0,156,1997	0/0:43,0:43:75.80:0,76,1107	0/0:74,1:72:99:0,180,2275	0/0:16,0:16:37.99:0,38,517	1/1:11,27:24:27.39:393,27,0	1/1:8,6:7:11.07:157,11,0	0/0:46,0:46:99:0,115,1500	0/0:52,0:51:99:0,117,1525	1/1:6,15:10:9.03:156,9,0	0/0:40,0:40:96.31:0,96,1264	0/0:41,0:38:86.71:0,87,1093	0/0:21,0:9:27.09:0,27,359	0/0:37,0:36:86.11:0,86,1185	0/0:125,0:122:99:0,256,3363	0/0:38,0:38:65.12:0,65,1059	0/0:17,0:17:45.15:0,45,590	0/0:54,0:54:99:0,132,1692	0/0:27,0:27:68.41:0,68,849	1/1:13,11:18:18.03:255,18,0	0/0:21,0:21:51.16:0,51,677	./.
chr10	101842094	.	A	AGT	2647.60	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.455;DP=978;FS=1.515;HRun=0;HaplotypeScore=147.6985;InbreedingCoeff=0.9262;MQ=50.22;MQ0=33;MQRankSum=-2.450;QD=15.30;ReadPosRankSum=-0.213;VQSLOD=3.6717;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,4:24:39.08:553,39,0	1/1:5,6:11:8.87:193,9,0	0/0:29,0:3:4.26:0,4,41	0/0:45,0:9:15.05:0,15,179	1/1:14,8:22:21.05:317,21,0	0/0:22,0:22:56.98:0,57,668	0/0:40,0:40:92.22:0,92,1062	0/0:55,0:44:96.17:0,96,1113	0/0:45,0:45:94.74:0,95,1445	0/0:74,0:72:99:0,155,2087	0/0:18,0:16:38.97:0,39,465	1/1:24,7:27:13.04:332,13,0	1/1:17,2:15:5.88:176,6,0	0/0:46,0:46:99:0,108,1294	0/0:35,0:35:67.74:0,68,819	1/1:17,4:16:12.04:181,12,0	0/0:27,0:27:58.41:0,58,703	1/1:36,3:37:76.84:1084,77,0	0/0:19,0:14:32.91:0,33,376	0/0:33,0:33:84.24:0,84,1041	0/0:112,0:112:99:0,243,3194	0/0:30,0:29:48.99:0,49,592	0/0:30,0:30:71.99:0,72,836	0/0:51,0:50:99:0,105,1296	0/0:19,0:19:24.88:0,25,377	0/0:42,0:36:82.14:0,82,1039	0/0:23,0:23:56.92:0,57,687	0/0:7,0:7:15.05:0,15,189
chr10	101842117	.	CTG	C	1764.81	PASS	AB=0.840;AC=14;AF=0.250;AN=56;BaseQRankSum=12.653;DP=1023;FS=2.972;HRun=0;HaplotypeScore=164.7986;InbreedingCoeff=0.5421;MQ=50.06;MQ0=35;MQRankSum=-1.000;QD=8.17;ReadPosRankSum=2.153;VQSLOD=3.3756;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,9:27:35.99:433,36,0	1/1:7,5:12:10.27:113,10,0	0/0:31,0:3:2.97:0,3,20	0/0:44,0:3:2.96:0,3,19	1/1:14,11:24:15.05:184,15,0	0/0:22,1:23:22.65:0,23,857	0/0:45,0:45:99:0,105,1663	0/0:51,0:44:82.04:0,82,1240	0/0:53,1:54:55.69:0,56,1814	0/0:72,1:71:87.50:0,87,2229	0/0:20,1:18:10.31:0,10,655	0/1:24,3:26:20.27:130,0,20	0/1:14,1:13:10.57:44,0,11	0/0:45,0:44:67.57:0,68,1562	0/0:36,0:36:72.20:0,72,1108	1/1:13,6:15:11.96:132,12,0	0/0:27,0:26:63.22:0,63,1028	0/1:27,9:34:48.98:658,0,49	0/0:26,1:14:27.55:0,28,400	0/0:39,0:39:84.27:0,84,1274	0/0:123,4:124:51.35:0,51,3711	0/0:32,0:30:72.20:0,72,1115	0/0:29,0:29:50.60:0,51,758	0/0:55,1:55:79.81:0,80,1782	0/0:23,0:23:9.78:0,10,576	0/1:26,0:35:53.62:179,0,54	0/0:22,0:22:45.15:0,45,727	1/1:0,0:7:14.20:70,14,0
chr10	101842165	.	C	CTG	2618.04	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=5.604;DP=1102;FS=4.033;HRun=0;HaplotypeScore=184.0933;InbreedingCoeff=0.9190;MQ=48.96;MQ0=39;MQRankSum=-5.193;QD=12.18;ReadPosRankSum=-0.992;VQSLOD=3.3947;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:35:1.01:0,1,95	1/1:16,1:16:13.22:124,13,0	0/0:46,0:5:15.05:0,15,180	0/0:42,0:7:14.89:0,15,151	1/1:29,1:27:14.96:188,15,0	0/0:21,0:21:48.11:0,48,562	0/0:44,0:44:93.30:0,93,1166	0/0:66,0:53:87.11:0,87,1129	0/0:47,0:47:99:0,105,1306	0/0:63,0:61:99:0,121,1438	0/0:28,0:26:48.11:0,48,563	1/1:26,2:22:17.90:257,18,0	1/1:24,1:20:11.17:92,11,0	0/0:41,0:41:87.24:0,87,1062	0/0:36,0:36:90.09:0,90,1101	1/1:21,0:16:9.03:106,9,0	0/0:32,0:29:67.86:0,68,834	1/1:25,21:45:14.14:1148,14,0	0/0:38,0:14:30.07:0,30,363	0/0:29,0:28:50.99:0,51,601	0/0:131,0:122:99:0,237,3059	0/0:38,0:37:75.18:0,75,892	0/0:28,0:28:53.19:0,53,626	0/0:61,0:63:99:0,135,1629	0/0:27,0:27:49.94:0,50,609	1/1:28,15:33:30.50:775,30,0	0/0:24,0:24:60.61:0,61,706	1/1:4,1:5:9.03:125,9,0
chr10	101842177	.	G	GTGGT	2372.45	PASS	AB=0.892;AC=15;AF=0.268;AN=56;BaseQRankSum=9.470;DP=1069;FS=8.962;HRun=0;HaplotypeScore=212.4673;InbreedingCoeff=0.7000;MQ=49.24;MQ0=38;MQRankSum=-2.699;QD=10.18;ReadPosRankSum=1.141;VQSLOD=1.7921;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:36:38.37:145,0,38	1/1:7,5:12:14.96:248,15,0	0/0:51,0:6:15.05:0,15,205	0/0:48,0:7:17.64:0,18,239	1/1:11,14:24:21.07:527,21,0	0/0:24,0:25:71.98:0,72,1144	0/0:42,0:43:99:0,117,2013	0/0:54,0:46:99:0,125,1929	0/0:45,0:45:99:0,117,2178	0/0:58,0:60:99:0,145,2532	0/0:20,0:19:54.17:0,54,1005	1/1:13,11:18:23.81:388,24,0	1/1:14,8:18:29.82:431,30,0	0/0:35,0:36:96.30:0,96,1806	0/0:40,0:40:99:0,102,1851	1/1:10,6:14:11.93:237,12,0	0/0:30,0:28:71.88:0,72,1352	0/1:47,0:47:99:227,0,338	0/0:36,0:14:36.03:0,36,606	0/0:27,0:27:26.45:0,26,1039	0/0:124,0:122:99:0,296,5174	0/0:40,0:38:86.52:0,87,1659	0/0:27,0:27:65.24:0,65,1154	0/0:61,0:62:99:0,143,2777	0/0:31,0:31:70.39:0,70,1161	0/1:34,0:26:99:271,0,108	0/0:28,0:29:72.11:0,72,1268	1/1:3,0:3:8.76:88,9,0
chr10	101842244	.	GTGTGTGTGTCTT	G	1901.30	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=4.535;DP=972;FS=20.665;HRun=0;HaplotypeScore=322.6307;InbreedingCoeff=0.8925;MQ=53.26;MQ0=20;MQRankSum=-2.778;QD=14.85;ReadPosRankSum=-2.177;VQSLOD=0.7550;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:16:0.05:1,0,0	1/1:5,0:5:3:25,3,0	0/0:54,0:9:20.95:0,21,526	0/0:61,0:9:13.35:0,13,63	1/1:14,0:14:9.01:124,9,0	0/0:26,0:26:75.26:0,75,3326	0/0:50,0:50:99:0,131,5608	0/0:33,0:31:78.25:0,78,2914	0/0:40,0:40:99:0,114,5087	0/0:55,0:54:99:0,153,6464	0/0:18,0:17:48.15:0,48,1792	1/1:31,0:27:11.91:248,12,0	1/1:19,0:16:24.01:487,24,0	0/0:34,0:33:82.73:0,83,3651	0/0:30,0:30:78.51:0,79,3348	1/1:19,1:17:9.02:154,9,0	0/0:42,0:40:84.99:0,85,4688	0/0:42,0:42:79.09:0,79,3040	0/0:22,0:16:45.15:0,45,1928	0/0:27,0:27:69.24:0,69,3163	0/0:118,0:116:99:0,282,12465	0/0:43,0:43:99:0,118,5121	0/0:22,0:22:60.30:0,60,2833	0/0:62,0:62:99:0,153,7039	0/0:34,0:34:86.33:0,86,4170	1/1:11,10:20:39.06:1032,39,0	0/0:31,0:31:75.21:0,75,3346	./.
chr10	101842252	.	GTCTT	G	677.02	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=8.035;DP=953;FS=23.581;HRun=0;HaplotypeScore=190.7465;InbreedingCoeff=0.8876;MQ=52.68;MQ0=15;MQRankSum=-4.966;QD=5.42;ReadPosRankSum=-3.398;VQSLOD=0.7339;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:15:0.24:1,0,0	1/1:5,1:5:3:25,3,0	0/0:53,0:10:24.01:0,24,459	0/0:52,3:8:9.98:0,10,105	1/1:5,7:12:8.99:74,9,0	0/0:27,0:27:81.28:0,81,2148	0/0:50,0:50:99:0,146,3476	0/0:31,0:30:87.28:0,87,2080	0/0:39,0:39:99:0,117,2947	0/0:55,0:53:99:0,159,3838	0/0:18,0:17:51.16:0,51,1177	1/1:15,11:23:12.37:119,12,0	1/1:11,5:14:25.48:210,25,0	0/0:34,0:33:85.99:0,86,2082	0/0:31,0:31:87.26:0,87,2133	1/1:12,8:17:8.14:64,8,0	0/0:44,0:42:99:0,106,2787	0/0:37,0:37:54.11:0,54,1709	0/0:22,0:17:51.17:0,51,1244	0/0:25,0:25:72.24:0,72,1790	0/0:119,0:116:99:0,306,7354	0/0:44,0:44:99:0,129,3013	0/0:21,0:21:60.27:0,60,1471	0/0:63,0:63:99:0,170,4244	0/0:30,0:30:86.33:0,86,2297	1/1:23,0:21:38.99:352,39,0	0/0:29,0:29:75.04:0,75,1911	./.
chr10	101842261	.	TGTGTG	T	513.99	PASS	AB=0.865;AC=10;AF=0.185;AN=54;BaseQRankSum=8.868;DP=963;FS=13.127;HRun=0;HaplotypeScore=196.6573;InbreedingCoeff=0.2627;MQ=52.01;MQ0=25;MQRankSum=-7.130;QD=3.57;ReadPosRankSum=-2.454;VQSLOD=1.4150;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:16:0.09:1,0,0	1/1:4,1:2:3.01:35,3,0	0/0:54,0:7:21.04:0,21,356	0/0:65,0:9:26.49:0,26,406	./.	0/0:30,0:30:72.23:0,72,1977	0/0:54,0:53:99:0,138,3628	0/0:31,0:30:81.26:0,81,2115	0/0:34,0:34:99:0,99,2768	0/0:56,0:54:99:0,126,3294	0/0:18,0:17:42.13:0,42,1168	0/1:16,11:22:20.21:152,0,20	0/1:10,5:11:19.73:125,0,20	0/0:35,0:34:87.13:0,87,2174	0/0:33,0:33:81.73:0,82,2114	1/1:11,8:14:2.09:167,2,0	0/0:46,0:43:79.95:0,80,3414	0/1:38,0:38:72.70:73,0,1002	0/0:25,0:18:45.15:0,45,1321	0/0:24,0:24:60.15:0,60,1692	0/0:125,0:121:99:0,272,7699	0/0:45,0:45:76.23:0,76,3179	0/0:21,0:21:54.19:0,54,1576	0/0:60,0:60:99:0,147,4165	0/0:29,0:29:69.24:0,69,2009	0/1:23,0:19:88.92:89,0,316	0/0:24,0:24:63.12:0,63,1534	0/0:1,0:1:3.01:0,3,30
chr10	101842266	.	G	GTGGT	2960.59	PASS	AB=0.935;AC=14;AF=0.259;AN=54;BaseQRankSum=4.229;DP=1000;FS=4.430;HRun=0;HaplotypeScore=187.2122;InbreedingCoeff=0.7320;MQ=52.12;MQ0=26;MQRankSum=-1.095;QD=18.28;ReadPosRankSum=-1.971;VQSLOD=2.7582;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:17:0.88:2,1,0	1/1:1,0:2:3.01:35,3,0	0/0:51,0:7:20.05:0,20,263	0/0:65,0:9:18.52:0,19,248	./.	0/0:30,0:30:81.23:0,81,1440	0/0:52,0:52:99:0,138,2508	0/0:33,0:32:93.26:0,93,1522	0/0:38,0:38:99:0,101,1892	0/0:51,0:49:99:0,129,2265	0/0:17,0:16:45.14:0,45,826	1/1:21,0:22:23.54:262,24,0	0/1:17,0:14:1.71:123,0,2	0/0:40,0:39:90.61:0,91,1523	0/0:31,0:31:84.26:0,84,1473	1/1:14,0:14:21.06:267,21,0	0/0:50,0:47:99:0,112,2363	1/1:19,19:40:95.88:2340,96,0	0/0:25,0:17:48.15:0,48,909	0/0:24,0:24:63.21:0,63,1150	0/0:124,0:122:99:0,296,5459	0/0:47,0:47:79.90:0,80,2186	0/0:21,0:21:54.18:0,54,1043	0/0:68,0:68:99:0,171,3145	0/0:34,0:34:78.25:0,78,1465	0/1:33,0:28:50.13:50,0,425	0/0:24,0:24:69.08:0,69,1119	1/1:1,0:1:3.01:46,3,0
chr10	101842276	.	TGC	T	63.74	PASS	AB=0.946;AC=5;AF=0.089;AN=56;BaseQRankSum=6.301;DP=1016;FS=16.786;HRun=0;HaplotypeScore=158.7422;InbreedingCoeff=0.0854;MQ=51.58;MQ0=29;MQRankSum=-2.824;QD=0.38;ReadPosRankSum=-6.356;VQSLOD=-0.7241;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:16,7:22:0.11:54,0,0	0/0:8,0:5:2.98:0,3,21	0/1:50,0:5:25.86:26,0,41	0/0:64,0:8:6.58:0,7,161	0/1:14,0:12:13.30:13,0,38	0/0:28,0:28:65.07:0,65,1253	0/0:52,0:51:99:0,117,2030	0/0:42,0:39:99:0,105,1607	0/0:35,0:35:90.15:0,90,1564	0/0:49,0:48:65.73:0,66,1911	0/0:19,0:18:50.47:0,50,833	0/0:27,0:22:24.76:0,25,202	0/0:22,0:16:19.53:0,20,163	0/0:33,0:32:78.68:0,79,1355	0/0:29,0:28:60.68:0,61,1255	0/0:21,0:16:26.56:0,27,191	0/0:53,0:50:87.76:0,88,2264	0/1:35,0:35:6.63:7,0,818	0/0:26,0:19:53.93:0,54,819	0/0:24,0:24:54.72:0,55,940	0/0:126,0:122:99:0,318,5023	0/0:45,0:45:99:0,126,2123	0/0:25,0:25:50.84:0,51,937	0/0:65,1:66:99:0,168,2947	0/0:33,0:33:87.03:0,87,1457	0/1:42,0:37:75.07:75,0,696	0/0:19,0:19:48.01:0,48,778	0/0:2,0:2:1.92:0,2,7
chr10	101842278	.	C	CGT	304	PASS	AB=0.944;AC=9;AF=0.161;AN=56;BaseQRankSum=7.690;DP=1025;FS=0.730;HRun=0;HaplotypeScore=165.1341;InbreedingCoeff=0.1246;MQ=51.41;MQ0=29;MQRankSum=-2.525;QD=1.60;ReadPosRankSum=-2.154;VQSLOD=2.4628;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,3:22:5.79:81,6,0	0/0:9,0:5:0.89:0,1,2	0/0:51,0:5:4.82:0,5,35	0/0:65,0:9:9.03:0,9,113	0/1:14,0:12:38.23:38,0,53	0/0:28,0:28:68.62:0,69,806	0/0:54,0:53:99:0,104,1208	0/0:41,0:40:87.23:0,87,1082	0/0:34,0:34:83.97:0,84,1025	0/0:51,0:50:99:0,114,1385	0/0:18,0:17:51.15:0,51,632	0/1:28,1:24:42.75:43,0,57	0/1:23,0:17:1.24:1,0,125	0/0:34,0:33:80.55:0,81,911	0/0:29,0:28:69.05:0,69,855	0/1:21,0:16:1.76:2,0,53	0/0:56,0:54:99:0,118,1622	0/1:34,0:34:27.46:27,0,243	0/0:25,0:18:48.08:0,48,579	0/0:24,0:24:50.46:0,50,598	0/0:126,0:122:99:0,251,3279	0/0:46,0:46:99:0,117,1426	0/0:24,0:24:55.42:0,55,657	0/0:67,0:67:99:0,159,2008	0/0:32,0:32:78.17:0,78,974	0/1:43,1:38:99:196,0,548	0/0:17,0:17:39.12:0,39,496	0/1:1,1:2:5.64:44,0,6
chr10	101842349	.	ATGTGTGTCTGTG	A	4903.43	PASS	AB=0.928;AC=9;AF=0.161;AN=56;BaseQRankSum=1.979;DP=1018;FS=12.142;HRun=0;HaplotypeScore=299.1843;InbreedingCoeff=0.3437;MQ=50.25;MQ0=41;MQRankSum=1.974;QD=22.09;ReadPosRankSum=2.075;VQSLOD=2.3551;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:48,1:47:99:384,0,860	1/1:9,1:10:12.90:311,13,0	0/0:16,0:4:6.02:0,6,89	0/0:24,0:4:6:0,6,60	0/1:22,5:25:4.78:767,0,5	0/0:31,0:31:78.19:0,78,2506	0/0:38,0:37:96.31:0,96,2840	0/0:73,0:53:99:0,126,3065	0/0:23,0:23:66.14:0,66,2048	0/0:51,0:48:99:0,129,4134	0/0:16,0:15:30.10:0,30,904	0/1:31,1:31:93.45:510,0,93	0/1:22,3:22:68.36:587,0,68	0/0:33,0:32:87.28:0,87,2786	0/0:29,0:29:78.23:0,78,2597	1/1:16,1:16:26.54:669,27,0	0/0:43,0:42:99:0,117,3514	0/0:28,0:27:74.05:0,74,1828	0/0:38,0:20:46.94:0,47,1309	0/0:26,0:24:69.24:0,69,2426	0/0:133,0:129:99:0,310,9548	0/0:36,0:36:87.25:0,87,2874	0/0:25,0:23:66.23:0,66,1999	0/0:67,0:67:99:0,157,5354	0/0:31,0:31:72.12:0,72,2503	0/1:59,3:58:99:1676,0,1239	0/0:26,0:26:72.25:0,72,2460	0/0:8,0:8:14.96:0,15,377
chr10	101842402	.	AGT	A	412.18	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.418;DP=811;FS=1.662;HRun=0;HaplotypeScore=132.7150;InbreedingCoeff=0.6165;MQ=50.66;MQ0=27;MQRankSum=-3.641;QD=22.90;ReadPosRankSum=1.051;VQSLOD=4.3502;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:46:56.48:0,56,823	0/0:8,0:8:8.81:0,9,148	0/0:28,1:2:6:0,6,63	0/0:31,0:1:2.22:0,2,7	0/0:25,0:25:39.13:0,39,641	0/0:28,0:28:60.18:0,60,1013	0/0:31,0:30:71.73:0,72,1128	0/0:47,0:40:90.12:0,90,1399	0/0:18,1:19:8.07:0,8,667	0/0:46,0:42:99:0,108,1739	0/0:21,0:20:60.20:0,60,981	0/0:20,0:20:11.08:0,11,244	0/0:20,0:20:33.01:0,33,489	0/0:28,0:27:72.08:0,72,1101	0/0:27,0:27:67.03:0,67,1040	0/0:21,0:19:3.11:0,3,280	0/0:34,0:32:72.83:0,73,1252	1/1:7,11:18:41.32:506,41,0	0/0:14,0:11:24.53:0,25,386	0/0:22,1:23:15.41:0,15,733	0/0:102,0:99:99:0,220,3346	0/0:21,0:21:57.07:0,57,856	0/0:22,0:22:52.50:0,52,790	0/0:45,0:45:99:0,100,1575	0/0:17,0:17:39.12:0,39,628	0/0:37,0:33:39.21:0,39,1069	0/0:21,0:21:51.17:0,51,849	0/0:8,0:6:15.04:0,15,227
chr10	101842430	.	TGC	T	1616.48	PASS	AB=0.987;AC=16;AF=0.286;AN=56;BaseQRankSum=11.415;DP=904;FS=12.767;HRun=0;HaplotypeScore=149.9496;InbreedingCoeff=0.6697;MQ=50.06;MQ0=30;MQRankSum=-1.699;QD=6.12;ReadPosRankSum=-0.047;VQSLOD=2.2810;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:45,1:45:48.54:49,0,174	1/1:16,0:16:13.41:84,13,0	0/0:34,0:4:8.96:0,9,133	0/0:43,0:5:11.92:0,12,155	1/1:25,0:25:12.13:267,12,0	0/0:29,0:29:66.21:0,66,1171	0/0:24,0:23:60.56:0,61,897	0/0:50,3:45:22.79:0,23,1633	0/0:22,0:22:51.14:0,51,786	0/0:44,0:41:89.55:0,90,1698	0/0:30,0:29:28.32:0,28,1030	0/1:29,1:29:2.04:155,0,2	1/1:30,0:26:47.47:376,47,0	0/0:34,0:33:88.86:0,89,1294	0/0:26,0:26:71.89:0,72,1170	1/1:30,0:26:43.72:369,44,0	0/0:34,1:34:32.08:0,32,1140	0/1:18,0:18:61.17:61,0,444	0/0:18,0:12:35.99:0,36,583	0/0:29,0:29:35.62:0,36,976	0/0:101,1:96:99:0,165,3071	0/1:27,0:26:6.83:7,0,641	0/0:28,0:27:17.20:0,17,897	0/0:40,0:40:90.05:0,90,1501	0/0:28,0:27:51.35:0,51,651	1/1:34,0:30:13.03:327,13,0	0/0:21,0:21:60.04:0,60,904	1/1:8,0:7:17.47:113,17,0
chr10	101842432	.	CGT	C	3055.16	PASS	AB=0.980;AC=15;AF=0.268;AN=56;BaseQRankSum=6.365;DP=913;FS=9.467;HRun=0;HaplotypeScore=149.4773;InbreedingCoeff=0.8570;MQ=50.24;MQ0=28;MQRankSum=3.120;QD=13.52;ReadPosRankSum=0.752;VQSLOD=3.2855;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:49,1:49:28.85:387,0,29	1/1:3,14:17:18.04:214,18,0	0/0:32,0:4:6.02:0,6,89	0/0:42,0:5:9.50:0,9,124	1/1:18,7:25:47.73:596,48,0	0/0:30,0:30:65.83:0,66,982	0/0:24,0:23:54.60:0,55,802	0/0:54,0:46:55.09:0,55,1449	0/0:21,0:21:47.96:0,48,706	0/0:46,0:43:99:0,110,1591	0/0:28,0:27:33.61:0,34,852	1/1:23,7:29:24.03:285,24,0	1/1:19,11:26:45.14:558,45,0	0/0:36,0:35:79.11:0,79,1127	0/0:29,0:29:76.28:0,76,1047	1/1:23,8:27:43.12:494,43,0	0/0:33,0:32:45.22:0,45,1014	0/0:18,0:18:8:0,8,330	0/0:18,0:12:33.11:0,33,514	0/0:29,1:30:64.41:0,64,909	0/0:99,0:93:99:0,155,2430	0/0:28,0:27:16.78:0,17,679	0/0:26,0:25:35.59:0,36,817	0/0:40,0:40:89.77:0,90,1367	0/0:28,0:27:54.72:0,55,644	1/1:25,9:30:34.75:568,35,0	0/0:25,0:25:56.98:0,57,794	1/1:4,5:8:8.91:149,9,0
chr10	101842441	.	G	GTC	859.78	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=6.639;DP=916;FS=48.367;HRun=0;HaplotypeScore=165.7236;InbreedingCoeff=0.0721;MQ=50.34;MQ0=26;MQRankSum=0.160;QD=3.52;ReadPosRankSum=-0.355;VQSLOD=1.1695;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:41,13:53:40.01:812,40,0	0/1:17,0:17:10.32:10,0,46	0/0:29,0:4:6.02:0,6,92	0/0:31,0:5:12.03:0,12,162	0/1:27,0:27:58.26:58,0,113	0/0:32,0:32:69.20:0,69,1008	0/0:23,0:22:62.45:0,62,818	0/0:56,0:48:99:0,107,1557	0/0:22,0:22:57.58:0,58,778	0/0:54,0:50:99:0,143,1791	0/0:29,0:28:61.22:0,61,1052	0/1:30,0:29:11.59:12,0,95	0/1:35,0:30:21.96:22,0,190	0/0:31,0:30:80.89:0,81,1160	0/0:32,0:32:84.11:0,84,1146	0/1:33,0:29:10.91:11,0,146	0/0:34,0:33:61.24:0,61,852	0/0:15,0:15:36.25:0,36,421	0/0:20,0:12:36.05:0,36,517	0/0:30,0:30:79.12:0,79,1067	0/0:89,0:83:99:0,183,2610	0/0:27,0:26:52.64:0,53,846	0/0:28,0:27:47.28:0,47,926	0/0:38,0:38:97.82:0,98,1366	0/0:28,0:27:66.17:0,66,900	0/1:36,0:32:54.26:54,0,204	0/0:24,0:24:63.10:0,63,842	0/1:12,0:11:24.26:24,0,92
chr10	101843573	.	A	ATC	1123.70	PASS	AB=0.856;AC=16;AF=0.320;AN=50;BaseQRankSum=1.880;DP=448;FS=30.268;HRun=0;HaplotypeScore=105.3463;InbreedingCoeff=0.2550;MQ=67.32;MQ0=13;MQRankSum=-1.590;QD=5.40;ReadPosRankSum=-3.048;VQSLOD=0.4008;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:1.23:0,1,59	0/0:4,0:4:5.23:0,5,38	./.	./.	0/0:21,0:20:4.79:0,5,26	0/0:23,0:22:17.24:0,17,113	0/1:8,4:12:35.98:36,0,38	1/1:35,0:35:6.77:39,7,0	0/0:13,0:13:20.74:0,21,159	0/0:18,0:18:23.36:0,23,177	0/0:16,0:16:14.27:0,14,93	0/0:9,0:9:7.16:0,7,29	1/1:6,0:6:11.18:72,11,0	./.	0/0:9,0:9:14.91:0,15,117	0/0:6,0:6:12.42:0,12,50	0/0:10,0:10:11.56:0,12,106	1/1:21,0:21:1.12:75,1,0	0/1:17,0:17:53.90:117,0,54	0/1:18,7:24:20.10:39,0,20	0/1:19,0:18:9.53:285,0,10	0/0:7,0:7:6.87:0,7,51	0/0:12,0:12:7.79:0,8,49	0/1:18,1:19:49.35:140,0,49	0/0:16,0:16:6.27:0,6,46	1/1:16,0:16:26.41:159,26,0	0/1:11,11:23:30.68:242,0,31	1/1:15,0:14:13.95:80,14,0
chr10	101843609	.	CTAT	C	2351.79	PASS	AB=0.858;AC=21;AF=0.375;AN=56;BaseQRankSum=5.751;DP=523;FS=23.758;HRun=0;HaplotypeScore=117.0151;InbreedingCoeff=0.2937;MQ=53.03;MQ0=32;MQRankSum=-5.587;QD=10.84;ReadPosRankSum=-0.252;VQSLOD=1.7032;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,10:21:26.30:85,0,26	0/1:4,3:7:32.97:34,0,33	0/0:56,2:7:8.59:0,9,100	0/0:87,1:20:15.76:0,16,284	0/1:16,1:17:10.21:19,0,10	0/0:20,1:21:50.06:0,50,438	0/0:8,0:8:13.84:0,14,69	0/1:16,4:19:81.80:177,0,82	0/0:15,0:15:41.07:0,41,336	0/0:18,0:18:16.71:0,17,325	0/0:13,0:15:28.53:0,29,265	1/1:3,4:7:10.57:100,11,0	1/1:2,5:7:20.07:257,20,0	0/0:9,0:9:3.45:0,3,81	0/0:8,0:8:23.66:0,24,242	1/1:2,9:11:20.27:213,20,0	0/0:10,0:10:29.55:0,30,305	1/1:8,5:13:35.36:373,35,0	0/1:16,0:16:18.56:19,0,268	0/0:19,0:19:18.17:0,18,274	0/1:17,4:20:56.65:57,0,202	0/0:11,0:11:9.67:0,10,84	0/1:8,0:10:1.41:1,0,79	0/1:17,2:19:24.67:25,0,298	0/1:17,0:17:31.22:31,0,126	1/1:8,9:17:24.55:618,25,0	0/0:22,1:24:8.83:0,9,258	1/1:8,5:13:39:533,39,0
chr10	101843610	.	TATTCTCTC	T	1814.48	PASS	AB=0.877;AC=14;AF=0.250;AN=56;BaseQRankSum=2.998;DP=513;FS=12.484;HRun=0;HaplotypeScore=145.8402;InbreedingCoeff=0.2795;MQ=53.10;MQ0=32;MQRankSum=-4.599;QD=12.60;ReadPosRankSum=-3.381;VQSLOD=1.2788;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:20:41.79:196,0,42	0/1:7,0:7:2:130,0,2	0/0:58,0:7:1.72:0,2,47	0/0:88,0:20:16.92:0,17,263	0/1:4,13:17:10.49:47,0,10	0/0:21,0:21:57.19:0,57,1371	0/0:7,0:7:5.90:0,6,155	0/1:16,0:15:0.72:1,0,354	0/0:16,0:15:42:0,42,807	0/0:16,0:16:15.67:0,16,869	0/0:15,0:15:38.96:0,39,805	1/1:7,0:7:17.98:242,18,0	1/1:7,0:7:13.27:224,13,0	0/0:9,0:9:26.89:0,27,415	0/0:8,0:8:24.08:0,24,604	1/1:11,0:11:32.91:484,33,0	0/0:10,0:10:30.10:0,30,883	0/1:8,0:12:48.51:49,0,89	0/1:15,0:16:15.16:15,0,833	0/0:19,0:19:42.13:0,42,970	0/0:20,0:19:45.04:0,45,890	0/0:11,0:11:30.03:0,30,462	0/0:10,0:10:26.82:0,27,427	0/0:19,0:19:42.79:0,43,984	0/0:17,0:18:22.16:0,22,537	0/1:16,0:17:99:411,0,176	0/0:22,0:22:39.61:0,40,997	0/1:10,0:13:99:181,0,101
chr10	101843612	.	T	TC	1243.49	PASS	AB=0.991;AC=13;AF=0.232;AN=56;BaseQRankSum=7.024;DP=524;FS=23.407;HRun=0;HaplotypeScore=112.6509;InbreedingCoeff=0.4061;MQ=55.16;MQ0=32;MQRankSum=-4.858;QD=11.00;ReadPosRankSum=-1.068;VQSLOD=2.0629;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:25.60:26,0,109	0/1:8,0:8:16.77:17,0,43	0/0:58,0:7:9.47:0,9,93	0/0:93,0:22:2.38:0,2,204	0/0:17,0:17:5.97:0,6,58	0/0:24,0:23:62.44:0,62,652	0/0:8,0:8:12.29:0,12,110	0/1:16,0:15:91.70:92,0,235	0/0:16,0:15:44.63:0,45,469	0/0:17,0:17:36.45:0,36,441	0/0:15,0:15:35.60:0,36,369	0/1:8,0:8:18.49:18,0,24	1/1:6,1:7:11.13:51,11,0	0/0:9,0:9:22.67:0,23,199	0/0:8,0:8:21.94:0,22,258	0/1:11,0:11:46.70:47,0,66	0/0:10,0:10:30.02:0,30,353	1/1:11,1:12:27.39:225,27,0	0/0:16,0:16:39.11:0,39,350	0/0:19,0:19:31.11:0,31,318	0/0:20,0:20:28.76:0,29,343	0/0:10,0:10:11.99:0,12,131	0/0:9,0:10:19.73:0,20,174	0/0:19,0:19:31.10:0,31,377	0/0:18,0:18:2.49:0,2,214	1/1:12,5:17:14.30:495,14,0	0/0:22,0:22:21.78:0,22,237	1/1:8,5:13:39.05:446,39,0
chr10	101843615	.	TCTC	T	909.83	PASS	AB=0.943;AC=10;AF=0.179;AN=56;BaseQRankSum=7.581;DP=529;FS=20.212;HRun=0;HaplotypeScore=125.0866;InbreedingCoeff=0.3484;MQ=57.23;MQ0=31;MQRankSum=-7.711;QD=8.92;ReadPosRankSum=-2.063;VQSLOD=1.2047;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,2:20:13.46:130,0,13	0/1:7,0:7:0.09:62,0,0	0/0:63,0:10:13.63:0,14,127	0/0:97,0:25:13.74:0,14,293	0/1:16,1:17:19.43:39,0,19	0/0:24,0:23:63.06:0,63,1402	0/0:9,0:9:18.46:0,18,259	0/0:17,0:16:44.39:0,44,731	0/0:15,0:14:42.14:0,42,875	0/0:16,0:16:48.15:0,48,934	0/0:15,0:15:33.11:0,33,738	0/1:6,2:8:8.13:112,0,8	1/1:7,0:7:7.27:170,7,0	0/0:9,0:9:26.85:0,27,503	0/0:8,0:8:24.08:0,24,536	1/1:9,2:11:30.45:244,30,0	0/0:10,0:10:30.10:0,30,695	0/0:9,0:12:13.65:0,14,158	0/0:16,0:16:47.87:0,48,830	0/0:19,0:19:41.72:0,42,932	0/0:19,0:19:37.46:0,37,918	0/0:10,0:10:27.09:0,27,577	0/0:10,0:10:23.90:0,24,400	0/0:19,0:19:40.35:0,40,954	0/0:16,0:16:24.01:0,24,512	0/1:18,0:18:99:210,0,126	0/0:23,0:23:37.41:0,37,899	0/1:13,0:13:86.37:94,0,86
chr10	101843617	.	TC	T	1047.53	PASS	AB=0.707;AC=11;AF=0.196;AN=56;BaseQRankSum=7.646;DP=535;FS=27.920;HRun=1;HaplotypeScore=114.7880;InbreedingCoeff=0.4009;MQ=59.97;MQ0=30;MQRankSum=-5.914;QD=10.58;ReadPosRankSum=-1.346;VQSLOD=0.0052;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,9:20:33.47:103,0,33	1/1:4,3:7:9.84:75,10,0	0/0:66,0:12:17.54:0,18,155	0/0:99,0:27:9.92:0,10,274	1/1:16,0:16:5.89:37,6,0	0/0:25,0:24:65.92:0,66,994	0/0:9,0:9:18.49:0,18,222	0/0:17,0:17:31.95:0,32,550	0/0:15,0:14:42.13:0,42,635	0/0:16,0:16:48.15:0,48,699	0/0:15,0:15:33.11:0,33,519	0/1:6,2:8:18.05:98,0,18	0/1:1,6:7:3.60:165,0,4	0/0:9,0:9:26.05:0,26,351	0/0:9,0:9:24.08:0,24,378	1/1:6,6:12:18.73:186,19,0	0/0:10,0:10:30.10:0,30,472	0/0:12,0:13:3.23:0,3,187	0/0:17,0:17:49.24:0,49,652	0/0:19,0:19:40.18:0,40,623	0/0:19,0:19:19.83:0,20,598	0/0:10,0:10:27.09:0,27,417	0/0:11,0:11:22.89:0,23,307	0/0:19,0:19:31.34:0,31,645	0/0:16,0:16:24.07:0,24,360	0/1:13,5:18:50.24:343,0,50	0/0:22,0:22:28.84:0,29,623	0/1:6,4:10:42.72:198,0,43
chr10	101843649	.	C	CTG	621.06	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-4.503;DP=447;FS=0.905;HRun=0;HaplotypeScore=106.3584;InbreedingCoeff=0.6340;MQ=73.84;MQ0=3;MQRankSum=1.562;QD=11.09;ReadPosRankSum=-3.740;VQSLOD=2.3537;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:27.09:0,27,347	0/0:8,0:8:21.07:0,21,272	0/0:26,0:18:30.10:0,30,390	0/1:37,0:26:13.06:13,0,132	0/0:20,0:20:27.09:0,27,350	0/0:26,0:26:66.13:0,66,820	0/0:10,0:10:30.07:0,30,361	1/1:4,15:19:45.12:712,45,0	0/0:12,0:12:30.10:0,30,390	0/0:15,0:15:30.10:0,30,390	0/0:13,0:13:30:0,30,353	0/0:14,0:14:30.07:0,30,389	0/0:13,0:13:30.08:0,30,372	0/0:17,0:17:48.16:0,48,623	0/0:12,0:12:33.08:0,33,411	0/0:15,0:15:30.10:0,30,389	0/0:17,0:17:39.07:0,39,472	0/0:14,0:14:30.08:0,30,374	0/0:15,0:14:36.12:0,36,468	0/0:18,0:18:42.14:0,42,545	0/0:13,0:13:33.11:0,33,422	0/0:11,0:11:24.08:0,24,311	0/0:10,0:10:18.06:0,18,233	0/0:16,0:16:29.96:0,30,389	0/0:11,0:11:24.08:0,24,311	0/0:15,0:15:35.98:0,36,466	0/0:24,0:24:60.09:0,60,727	0/0:8,0:8:12.04:0,12,156
chr10	101844174	.	AT	A	4254.64	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=6.369;DP=609;FS=27.340;HRun=4;HaplotypeScore=86.7800;InbreedingCoeff=0.9486;MQ=78.60;MQ0=2;MQRankSum=-1.428;QD=21.49;ReadPosRankSum=3.189;VQSLOD=3.2796;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,35:36:77.16:911,77,0	1/1:1,7:8:17.97:196,18,0	0/0:39,0:23:39.16:0,39,417	0/1:27,0:23:1.33:1,0,152	1/1:4,33:37:77.41:834,77,0	0/0:20,0:20:56.32:0,56,637	0/0:15,0:15:42:0,42,503	0/0:35,0:35:99:0,102,1223	0/0:15,0:15:42.06:0,42,515	0/0:22,0:22:66.19:0,66,850	0/0:16,0:16:47.99:0,48,552	1/1:3,11:14:23.84:233,24,0	1/1:1,12:13:30.09:355,30,0	0/0:15,0:15:42.05:0,42,540	0/0:32,0:32:90:0,90,1113	1/1:3,14:17:35.91:400,36,0	0/0:23,0:23:66.12:0,66,831	0/0:20,0:20:60.07:0,60,736	0/0:28,0:28:68.71:0,69,797	0/0:30,0:30:84.71:0,85,1104	0/0:10,0:10:27.08:0,27,360	0/0:19,0:19:57.01:0,57,691	0/0:17,0:17:50.98:0,51,634	0/0:13,0:13:36.02:0,36,459	0/0:24,0:24:69.87:0,70,810	1/1:2,23:25:60.16:696,60,0	0/0:17,0:17:48.12:0,48,617	1/1:1,20:21:54.14:628,54,0
chr10	101844177	.	TTA	T	370.25	PASS	AB=0.985;AC=12;AF=0.214;AN=56;BaseQRankSum=13.814;DP=603;FS=7.268;HRun=0;HaplotypeScore=108.5184;InbreedingCoeff=0.5434;MQ=80.22;MQ0=2;MQRankSum=-2.846;QD=2.23;ReadPosRankSum=4.857;VQSLOD=1.1640;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:0.19:78,0,0	0/1:7,0:7:4.28:4,0,8	0/0:43,0:25:43.06:0,43,688	0/0:29,0:25:10.93:0,11,327	0/1:35,0:35:99:108,0,114	0/0:19,0:19:57.08:0,57,968	0/0:14,0:14:42.01:0,42,703	0/0:36,0:36:99:0,108,1872	0/0:14,0:14:42.13:0,42,745	0/0:23,0:23:67.10:0,67,1209	0/0:16,0:16:48.14:0,48,858	1/1:12,2:14:13.75:131,14,0	1/1:12,0:12:9.94:24,10,0	0/0:14,0:14:42.08:0,42,791	0/0:30,0:30:90.04:0,90,1578	0/1:15,1:16:6.67:57,0,7	0/0:23,0:23:66.20:0,66,1224	0/0:21,0:21:63.09:0,63,1091	0/0:26,0:26:75.18:0,75,1277	0/0:30,0:30:90.12:0,90,1595	0/0:9,0:9:27.09:0,27,541	0/0:19,0:19:57.17:0,57,1030	0/0:18,0:18:54.08:0,54,936	0/0:12,0:12:36.12:0,36,694	0/0:24,0:24:72.04:0,72,1227	0/1:24,0:24:24.92:38,0,25	0/0:17,0:17:51.13:0,51,911	1/1:20,1:21:20.95:90,21,0
chr10	101845363	.	GA	G	5608.31	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=17.750;DP=722;FS=8.214;HRun=6;HaplotypeScore=86.6732;InbreedingCoeff=0.9898;MQ=76.83;MQ0=0;MQRankSum=0.867;QD=26.45;ReadPosRankSum=3.581;VQSLOD=5.0144;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,37:42:99:1037,99,0	1/1:1,17:18:44.98:482,45,0	0/0:17,0:16:39.02:0,39,434	0/0:14,0:15:29.54:0,30,310	1/1:4,31:35:93.10:968,93,0	0/0:17,0:17:48.14:0,48,598	0/0:24,0:24:66.19:0,66,831	0/0:33,0:33:81.14:0,81,975	0/0:32,0:32:87.28:0,87,1130	0/0:33,0:33:87.28:0,87,1121	0/0:30,0:31:90.11:0,90,1119	1/1:1,31:32:87.05:932,87,0	1/1:3,25:28:66.16:707,66,0	0/0:19,0:19:54.08:0,54,650	0/0:26,0:26:75.22:0,75,948	1/1:2,16:18:42.10:450,42,0	0/0:29,0:29:78.24:0,78,999	0/0:25,0:25:69.16:0,69,861	0/0:25,0:25:72.20:0,72,896	0/0:35,0:35:99:0,99,1257	0/0:19,0:19:51.15:0,51,649	0/0:26,0:26:66.19:0,66,830	0/0:27,0:27:78.24:0,78,995	0/0:21,0:21:60.15:0,60,760	0/0:32,0:32:90.26:0,90,1129	1/1:5,26:31:9.06:774,9,0	0/0:24,0:24:72.23:0,72,934	1/1:0,8:8:24.06:257,24,0
chr10	101846552	.	AACAC	A	424.31	PASS	AB=0.806;AC=10;AF=0.208;AN=48;BaseQRankSum=-0.206;DP=332;FS=7.931;HRun=0;HaplotypeScore=68.6053;InbreedingCoeff=0.4748;MQ=58.36;MQ0=14;MQRankSum=0.608;QD=5.30;ReadPosRankSum=-0.041;VQSLOD=0.7520;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:12.49:0,12,166	0/0:7,0:7:3.01:0,3,34	./.	0/0:23,0:18:3.01:0,3,42	0/0:20,0:19:15.05:0,15,242	0/0:22,1:24:24.86:0,25,503	0/1:15,0:15:78.06:78,0,102	1/1:19,0:18:7.37:76,7,0	0/0:4,0:4:2.99:0,3,23	0/0:8,0:7:15.49:0,15,212	0/0:8,0:8:6.02:0,6,95	0/0:13,0:11:9.03:0,9,127	0/0:4,0:4:11.96:0,12,149	0/0:4,0:4:2.87:0,3,59	./.	0/0:7,0:5:3.01:0,3,48	1/1:8,10:18:12.04:190,12,0	0/0:13,0:14:30.05:0,30,410	1/1:5,3:8:8.08:133,8,0	0/1:4,7:11:0.06:0,0,0	./.	0/0:9,0:9:12.51:0,13,232	0/0:4,0:4:3.01:0,3,72	0/0:27,0:27:32.85:0,33,617	./.	0/0:5,0:4:6.02:0,6,97	1/1:8,1:7:6.02:81,6,0	0/0:4,0:4:6.02:0,6,103
chr10	101846588	.	C	CAGAGAGAGAG	1647.65	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=5.812;DP=434;FS=0.970;HRun=0;HaplotypeScore=155.8141;InbreedingCoeff=0.8029;MQ=47.31;MQ0=15;MQRankSum=-7.317;QD=17.91;ReadPosRankSum=-4.245;VQSLOD=1.6065;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:21.89:0,22,636	./.	0/0:6,0:3:6.02:0,6,125	0/0:3,0:3:8.92:0,9,149	1/1:21,0:20:0.47:1,0,0	0/0:27,0:26:31.57:0,32,769	0/0:18,0:18:29.27:0,29,814	0/0:30,0:27:42.12:0,42,868	0/0:8,0:8:14.18:0,14,364	0/0:16,0:15:27.04:0,27,693	0/0:7,0:7:12.04:0,12,345	1/1:18,0:16:9.07:268,9,0	1/1:12,0:12:15.05:488,15,0	0/0:11,0:11:21.07:0,21,632	0/0:11,0:10:6.02:0,6,162	1/1:13,0:11:8.22:236,8,0	0/0:29,0:29:48.10:0,48,1204	1/1:12,1:11:0.47:1,0,0	0/0:14,0:14:12.03:0,12,300	0/0:17,0:17:15.61:0,16,527	0/0:29,0:29:18.14:0,18,1009	0/0:16,0:16:27.03:0,27,636	0/0:10,0:10:30.08:0,30,814	0/0:34,0:34:63:0,63,1754	0/0:14,0:13:27.09:0,27,785	1/1:4,6:9:20.86:631,21,0	0/0:22,0:20:47.29:0,47,1210	1/1:5,0:5:6.02:179,6,0
chr10	101846635	.	ACG	A	306.66	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=6.362;DP=374;FS=6.999;HRun=0;HaplotypeScore=94.9452;InbreedingCoeff=0.5431;MQ=55.23;MQ0=17;MQRankSum=-4.206;QD=2.98;ReadPosRankSum=1.175;VQSLOD=1.2925;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:14:5.47:5,0,85	1/1:1,3:4:5.99:51,6,0	0/0:26,0:9:13.35:0,13,125	0/0:25,0:15:21.35:0,21,257	0/0:11,1:12:0.94:0,1,2	0/1:17,0:16:5.39:5,0,305	0/0:12,0:12:32.24:0,32,286	0/0:25,0:25:59.72:0,60,457	0/0:9,0:9:21.44:0,21,282	0/0:8,0:8:16.87:0,17,185	0/0:15,0:14:9.50:0,9,316	1/1:11,2:13:8.50:62,9,0	1/1:6,2:7:11.32:62,11,0	0/0:8,0:8:4.50:0,4,114	0/0:6,0:6:18.02:0,18,264	0/0:8,0:7:0.14:0,0,1	0/0:21,0:21:61.27:0,61,684	1/1:5,0:4:2.98:21,3,0	0/1:4,0:4:12.84:13,0,13	0/0:7,0:6:12.01:0,12,125	0/0:24,0:23:42.80:0,43,394	0/0:13,0:13:26.91:0,27,309	0/0:15,0:15:21.75:0,22,232	0/1:22,0:22:41.89:42,0,132	0/0:13,0:13:25.31:0,25,225	1/1:9,0:9:17.80:124,18,0	0/0:24,0:24:25.83:0,26,540	1/1:6,0:5:14.72:91,15,0
chr10	101846658	.	CACACACACACACACACACAT	C	538.35	PASS	AB=1.000;AC=10;AF=0.185;AN=54;BaseQRankSum=2.580;DP=338;FS=1.217;HRun=0;HaplotypeScore=166.8037;InbreedingCoeff=0.5713;MQ=47.74;MQ0=20;MQRankSum=-2.053;QD=13.80;ReadPosRankSum=-1.526;VQSLOD=2.6576;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:14.45:0,14,737	1/1:2,2:4:9.03:335,9,0	0/0:14,0:1:3.01:0,3,58	0/0:17,0:7:18.02:0,18,507	1/1:7,1:8:3.72:27,4,0	0/0:19,0:18:45.15:0,45,2898	0/0:10,0:10:30.08:0,30,1785	0/0:21,0:21:31.82:0,32,2112	0/0:9,0:9:17.89:0,18,1515	0/0:9,0:9:27.09:0,27,1603	0/0:18,0:17:39.02:0,39,2494	1/1:4,2:6:4.57:162,5,0	1/1:5,2:5:3:129,3,0	0/0:7,0:7:15.05:0,15,1155	0/0:8,0:8:21.07:0,21,1549	./.	0/0:23,0:23:62.77:0,63,4055	0/0:7,0:5:9.03:0,9,310	0/0:12,0:12:36.08:0,36,1335	0/1:10,0:9:2.68:3,0,882	0/0:22,0:22:46.83:0,47,2322	0/0:9,0:9:24.08:0,24,1571	0/0:13,0:13:29.48:0,29,1447	0/0:21,0:21:33.11:0,33,1857	0/0:17,0:16:33.11:0,33,2144	0/1:4,0:4:16.33:16,0,169	0/0:19,0:19:57.20:0,57,4113	0/0:6,0:5:9.03:0,9,347
chr10	101846765	.	T	TCTGCACTC	430.49	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.879;DP=491;FS=5.055;HRun=0;HaplotypeScore=128.5443;InbreedingCoeff=0.8563;MQ=82.89;MQ0=0;MQRankSum=-3.265;QD=61.50;ReadPosRankSum=0.288;VQSLOD=3.0200;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.21:0,60,1627	0/0:5,0:5:15.05:0,15,407	0/0:18,0:18:42.14:0,42,1020	0/0:11,0:11:27.09:0,27,561	0/0:25,0:25:75.25:0,75,1919	0/0:20,0:20:60.16:0,60,1566	0/0:10,0:10:24.08:0,24,616	0/0:33,0:33:78.25:0,78,1773	0/0:16,0:16:45.15:0,45,1113	0/0:19,0:19:51.17:0,51,1357	0/0:23,0:23:48:0,48,1176	0/0:15,0:15:45.15:0,45,1165	0/0:14,0:14:36.12:0,36,933	0/0:17,0:17:51.18:0,51,1336	0/0:14,0:14:39.13:0,39,1040	0/0:9,0:9:24.08:0,24,633	0/0:35,0:35:99:0,99,2589	1/1:2,3:7:12.04:516,12,0	0/0:17,0:17:45.15:0,45,1199	0/0:20,0:20:54.19:0,54,1433	0/0:27,0:27:69.22:0,69,1778	0/0:10,0:10:27.09:0,27,683	0/0:13,0:13:39.13:0,39,1011	0/0:24,0:24:69.22:0,69,1794	0/0:18,0:18:42.11:0,42,1060	0/0:14,0:14:39.13:0,39,1053	0/0:31,0:30:75.26:0,75,1975	0/0:2,0:2:6.02:0,6,163
chr10	101847044	.	GA	G	567.24	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.855;DP=691;FS=0.908;HRun=2;HaplotypeScore=73.7192;InbreedingCoeff=0.9994;MQ=93.02;MQ0=1;MQRankSum=-3.561;QD=29.85;ReadPosRankSum=1.269;VQSLOD=3.3115;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.22:0,90,1300	0/0:11,0:11:30.10:0,30,449	0/0:31,0:31:72.93:0,73,1276	0/0:28,0:28:81.19:0,81,1159	0/0:34,0:34:99:0,102,1488	0/0:20,0:20:60.20:0,60,897	0/0:20,0:20:60.20:0,60,898	0/0:29,0:29:81.25:0,81,1176	0/0:35,0:35:99:0,102,1469	0/0:26,0:26:78.26:0,78,1143	0/0:25,0:25:75.25:0,75,1115	0/0:19,0:19:57.19:0,57,852	0/0:23,0:23:69.23:0,69,1033	0/0:17,0:17:48.16:0,48,718	0/0:29,0:29:87.24:0,87,1278	0/0:24,0:24:72.22:0,72,1041	0/0:23,0:23:69.22:0,69,1014	1/1:0,19:19:51.17:662,51,0	0/0:31,0:31:90.29:0,90,1328	0/0:27,0:27:81.27:0,81,1211	0/0:28,0:28:78.22:0,78,1109	0/0:20,0:20:60.20:0,60,892	0/0:24,0:24:72.24:0,72,1079	0/0:27,0:26:69.19:0,69,1007	0/0:24,0:24:72.22:0,72,1042	0/0:32,0:32:93.31:0,93,1376	0/0:23,0:23:63.21:0,63,940	0/0:12,0:12:36.04:0,36,436
chr10	101848016	.	GTAT	G	852.39	PASS	AB=0.913;AC=27;AF=0.563;AN=48;BaseQRankSum=3.520;DP=251;FS=3.030;HRun=0;HaplotypeScore=40.8430;InbreedingCoeff=0.3847;MQ=68.14;MQ0=0;MQRankSum=-0.350;QD=5.20;ReadPosRankSum=0.858;VQSLOD=1.6319;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:17:5.54:41,6,0	1/1:2,0:2:2.88:15,3,0	./.	./.	1/1:9,0:11:2.98:21,3,0	1/1:5,6:11:15.05:199,15,0	0/0:1,0:1:3.01:0,3,58	0/1:33,0:33:24.72:25,0,185	1/1:4,4:8:9.03:119,9,0	./.	1/1:9,1:10:3.01:40,3,0	1/1:1,0:3:5.95:41,6,0	1/1:4,0:6:5.95:42,6,0	1/1:3,1:4:3.01:40,3,0	0/1:6,1:7:24.78:25,0,216	1/1:2,0:4:2.98:21,3,0	0/1:16,3:19:46.63:47,0,447	1/1:21,0:21:23.91:296,24,0	0/0:9,0:10:9.02:0,9,111	0/0:9,0:10:6.01:0,6,64	0/0:3,0:3:3.01:0,3,57	1/1:7,1:8:3.01:40,3,0	0/0:6,0:6:3.01:0,3,58	./.	0/0:4,0:4:6.02:0,6,116	0/0:7,0:7:12.03:0,12,144	0/0:6,0:13:21.07:0,21,286	0/0:14,0:14:24.05:0,24,308
chr10	101848059	.	T	TATA	600.97	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=3.034;DP=232;FS=3.935;HRun=0;HaplotypeScore=40.1405;InbreedingCoeff=0.5499;MQ=86.68;MQ0=0;MQRankSum=1.129;QD=12.52;ReadPosRankSum=4.979;VQSLOD=2.5600;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:29.70:0,30,230	0/0:1,0:1:3:0,3,27	0/0:8,0:8:16.84:0,17,156	0/0:10,0:9:10.89:0,11,150	0/0:6,0:6:14.98:0,15,135	0/0:7,0:7:18.04:0,18,208	0/0:9,0:9:27.01:0,27,262	0/0:28,0:28:78.12:0,78,774	0/0:8,0:8:21.02:0,21,214	0/0:5,0:5:9.02:0,9,88	0/0:6,0:6:18.02:0,18,173	0/0:4,0:4:11.99:0,12,110	0/0:8,0:8:23.99:0,24,222	0/0:5,0:5:15.02:0,15,148	0/0:9,0:9:27.04:0,27,336	0/0:3,0:3:6.01:0,6,63	0/0:18,0:18:45.02:0,45,604	1/1:15,0:15:30.44:194,30,0	0/0:15,0:15:8.60:0,9,254	0/1:13,0:13:0.55:1,0,206	0/0:4,0:4:12:0,12,106	0/0:4,0:4:12.01:0,12,118	0/0:5,0:5:12.01:0,12,134	0/0:1,0:1:3:0,3,27	0/0:6,0:6:18.03:0,18,219	1/1:0,4:4:12.02:245,12,0	0/1:14,0:14:99:151,0,140	1/1:2,0:2:6.02:146,6,0
chr10	101848493	.	GCA	G	6069.63	PASS	AB=0.727;AC=29;AF=0.518;AN=56;BaseQRankSum=-0.845;DP=575;FS=6.530;HRun=0;HaplotypeScore=100.3400;InbreedingCoeff=0.7205;MQ=63.75;MQ0=4;MQRankSum=6.996;QD=17.90;ReadPosRankSum=5.636;VQSLOD=4.4272;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:45:24.55:0,25,216	0/0:6,0:10:5.74:0,6,38	0/0:34,0:17:21.07:0,21,312	0/0:30,0:22:11.31:0,11,119	0/0:14,0:17:11.32:0,11,64	0/1:8,9:19:4.49:271,0,4	1/1:10,24:34:51.53:744,52,0	1/1:13,11:24:27.07:310,27,0	1/1:5,19:25:63.01:704,63,0	0/1:20,0:20:6.42:6,0,485	0/0:19,0:19:7.65:0,8,519	0/0:16,0:18:6.01:0,6,67	0/0:11,0:14:5.94:0,6,44	1/1:2,17:21:53.82:580,54,0	1/1:2,8:12:26.74:269,27,0	0/0:13,0:16:9:0,9,77	1/1:11,14:27:38.94:426,39,0	0/0:10,0:10:6.01:0,6,65	1/1:10,3:12:9.17:113,9,0	0/1:6,11:19:10.74:303,0,11	1/1:9,17:27:41.95:462,42,0	1/1:5,12:18:35.93:393,36,0	1/1:1,12:15:29.75:304,30,0	1/1:12,18:30:45.13:517,45,0	1/1:8,5:13:17.72:184,18,0	0/0:13,0:13:32.87:0,33,334	1/1:6,14:20:42.12:483,42,0	0/0:7,0:9:11.98:0,12,111
chr10	101848521	.	A	ACACACACACACACACACACC	3102.89	PASS	AB=0.992;AC=10;AF=0.179;AN=56;BaseQRankSum=1.813;DP=616;FS=1.481;HRun=0;HaplotypeScore=319.2948;InbreedingCoeff=0.1577;MQ=63.98;MQ0=7;MQRankSum=-5.328;QD=19.89;ReadPosRankSum=-0.311;VQSLOD=1.5462;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:43:45.37:306,0,45	1/1:7,0:6:6.02:298,6,0	0/0:41,0:23:49.40:0,49,694	0/0:25,0:15:3.33:0,3,255	0/0:18,0:18:15.44:0,15,121	0/0:17,0:17:48:0,48,1356	0/0:30,0:30:84.07:0,84,2623	0/0:24,0:24:67.95:0,68,1051	0/0:28,0:28:81.19:0,81,3118	0/0:27,0:26:69.14:0,69,1489	0/0:20,0:20:53.78:0,54,1664	0/1:15,0:15:44.38:516,0,44	0/1:21,0:21:99:532,0,161	0/0:26,0:26:71.98:0,72,2285	0/0:11,0:11:27.09:0,27,1260	0/1:17,0:17:53.77:571,0,54	0/0:23,0:23:58.22:0,58,1965	1/1:2,5:13:3.83:578,4,0	0/0:16,0:15:38.72:0,39,775	0/0:25,0:25:63.09:0,63,1526	0/0:28,0:28:67.55:0,68,1843	0/0:17,0:17:45.01:0,45,1656	0/0:21,0:21:48.07:0,48,1495	0/0:30,0:30:69.11:0,69,2126	0/0:15,0:15:45.04:0,45,827	0/1:21,0:21:99:301,0,272	0/0:18,0:18:54.13:0,54,2112	0/1:18,0:19:99:144,0,277
chr10	101849019	.	CTG	C	1389.50	PASS	AB=0.577;AC=5;AF=0.089;AN=56;BaseQRankSum=10.136;DP=793;FS=3.634;HRun=0;HaplotypeScore=99.1407;InbreedingCoeff=0.8000;MQ=61.05;MQ0=11;MQRankSum=0.211;QD=23.96;ReadPosRankSum=1.661;VQSLOD=4.0382;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:72.20:0,72,1189	0/0:14,0:14:39.13:0,39,658	0/0:44,0:27:60.07:0,60,821	0/0:39,1:19:38.70:0,39,545	0/0:23,0:23:57.18:0,57,931	0/0:36,0:36:99:0,102,1695	0/0:24,0:24:60.21:0,60,1009	0/0:42,0:42:99:0,99,1547	0/0:27,0:27:66.64:0,67,1038	0/0:42,0:42:99:0,108,1820	0/0:11,0:11:27.09:0,27,455	0/0:33,0:33:72.23:0,72,1186	0/0:32,0:32:87.26:0,87,1421	0/0:31,0:31:84.29:0,84,1394	0/0:47,0:47:99:0,105,1742	0/0:35,0:35:81.23:0,81,1286	0/0:23,0:23:55.43:0,55,895	0/1:4,11:15:9.80:357,0,10	0/0:24,0:23:37.24:0,37,791	0/0:28,0:28:63.20:0,63,1033	0/0:26,0:26:54.18:0,54,899	0/0:19,0:19:57.18:0,57,935	0/0:19,0:19:54.15:0,54,857	0/0:27,0:27:72.23:0,72,1159	0/0:21,0:21:47.99:0,48,808	1/1:8,27:35:30.19:926,30,0	0/0:33,0:33:96.31:0,96,1579	1/1:0,8:8:18.06:234,18,0
chr10	101849504	.	AC	A	1663.21	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.932;DP=236;FS=3.015;HRun=1;HaplotypeScore=30.8764;InbreedingCoeff=0.7926;MQ=60.78;MQ0=1;MQRankSum=-0.839;QD=36.96;ReadPosRankSum=2.354;VQSLOD=3.3954;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:24.08:0,24,384	0/0:3,0:3:9.03:0,9,144	0/0:5,0:5:15.05:0,15,237	0/0:3,0:2:5.99:0,6,70	0/0:9,0:9:27.09:0,27,428	0/0:14,0:14:42.14:0,42,671	0/0:10,0:10:27.09:0,27,432	0/0:29,0:29:87.30:0,87,1390	0/0:5,0:5:15.05:0,15,234	0/0:8,0:8:24.07:0,24,361	0/0:6,0:6:15.05:0,15,240	0/0:5,0:5:15.05:0,15,240	0/0:6,0:6:18.06:0,18,288	0/0:8,0:8:24.07:0,24,361	0/0:3,0:3:9.03:0,9,144	0/0:4,0:4:12.04:0,12,192	0/0:19,0:19:54.13:0,54,839	1/1:0,15:15:42.14:587,42,0	0/0:11,0:11:33.11:0,33,528	0/0:5,0:5:15.05:0,15,240	0/0:5,0:5:15.05:0,15,240	0/0:1,0:1:3.01:0,3,48	0/0:3,0:2:6:0,6,71	0/0:5,0:5:15.05:0,15,240	0/0:4,0:4:12.04:0,12,192	1/1:0,12:12:36.12:504,36,0	0/0:11,0:11:33.10:0,33,507	1/1:0,18:18:51.17:713,51,0
chr10	101849655	.	A	AT	491.77	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.337;DP=355;FS=8.988;HRun=3;HaplotypeScore=39.8137;InbreedingCoeff=0.8846;MQ=71.04;MQ0=0;MQRankSum=-1.680;QD=35.13;ReadPosRankSum=-0.036;VQSLOD=3.2850;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.15:0,72,845	0/0:11,0:11:33.10:0,33,395	0/0:7,0:7:13.07:0,13,207	0/0:7,0:6:14.98:0,15,161	0/0:8,0:8:24.07:0,24,288	0/0:22,0:22:60.16:0,60,696	0/0:4,0:4:12.04:0,12,144	0/0:34,0:34:87.25:0,87,1023	0/0:11,0:11:33.10:0,33,396	0/0:6,0:6:18.05:0,18,211	0/0:16,0:16:48.14:0,48,570	0/0:12,0:12:33.10:0,33,396	0/0:9,0:9:27.08:0,27,323	0/0:16,0:16:48.15:0,48,576	0/0:13,0:13:33.10:0,33,396	0/0:17,0:17:48.15:0,48,576	0/0:14,0:14:42.10:0,42,490	1/1:0,14:14:42.14:587,42,0	0/0:13,0:13:39.12:0,39,468	0/0:12,0:12:33.10:0,33,395	0/0:11,0:11:27.08:0,27,324	0/0:5,0:5:12.04:0,12,144	0/0:9,0:9:27.08:0,27,323	0/0:6,0:6:18.06:0,18,216	0/0:24,0:24:69.21:0,69,827	0/0:9,0:9:27.08:0,27,323	0/0:12,0:12:33.10:0,33,395	0/0:8,0:8:21.06:0,21,252
chr10	101849700	.	T	TC	1269.66	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.177;DP=496;FS=25.081;HRun=4;HaplotypeScore=53.9711;InbreedingCoeff=0.9972;MQ=100.52;MQ0=0;MQRankSum=-2.783;QD=34.32;ReadPosRankSum=0.475;VQSLOD=1.5626;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:82.46:0,82,914	0/0:14,0:14:42.12:0,42,476	0/0:35,0:34:77.67:0,78,847	0/0:27,0:27:65.56:0,66,699	0/0:12,0:12:36.07:0,36,395	0/0:22,0:22:28.40:0,28,583	0/0:7,0:7:21.06:0,21,238	0/0:27,0:27:72.19:0,72,808	0/0:17,0:17:48.14:0,48,544	0/0:15,0:15:42.09:0,42,457	0/0:16,0:16:42.10:0,42,467	0/0:14,0:14:42.08:0,42,462	0/0:17,0:17:51.15:0,51,578	0/0:23,0:23:66.19:0,66,749	0/0:9,0:9:27.08:0,27,306	0/0:19,0:19:54.15:0,54,612	0/0:18,0:18:51.14:0,51,578	1/1:0,15:15:42.07:541,42,0	0/0:18,0:18:48.12:0,48,533	0/0:11,0:11:30.08:0,30,332	0/0:23,0:23:65.55:0,66,723	0/0:18,0:18:54.15:0,54,613	0/0:19,0:19:54.14:0,54,604	0/0:17,0:17:51.11:0,51,558	0/0:17,0:17:42.12:0,42,476	1/1:0,13:13:39.11:507,39,0	0/0:14,0:14:39.08:0,39,422	1/1:0,9:9:27.09:364,27,0
chr10	101850171	.	CAG	C	1702.72	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.926;DP=679;FS=2.038;HRun=0;HaplotypeScore=83.2944;InbreedingCoeff=0.9345;MQ=60.54;MQ0=0;MQRankSum=-0.857;QD=35.47;ReadPosRankSum=3.015;VQSLOD=6.0338;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,153,2883	0/0:13,0:13:39.13:0,39,741	0/0:22,0:20:56.93:0,57,998	0/0:29,0:25:71.71:0,72,1177	0/0:31,0:31:90.31:0,90,1673	0/0:18,0:18:54.17:0,54,991	0/0:31,0:31:90.26:0,90,1598	0/0:29,0:29:84.28:0,84,1591	0/0:25,0:25:75.26:0,75,1447	0/0:15,0:15:42.13:0,42,746	0/0:25,0:25:75.24:0,75,1415	0/0:19,0:19:51.16:0,51,923	0/0:19,0:19:57.18:0,57,1038	0/0:21,0:21:60.19:0,60,1094	0/0:26,0:26:78.25:0,78,1464	0/0:23,0:23:66.23:0,66,1267	0/0:41,0:41:99:0,123,2289	1/1:1,25:26:63.21:964,63,0	0/0:15,0:15:45.15:0,45,839	0/0:18,0:18:54.19:0,54,1019	0/0:32,0:31:90.29:0,90,1696	0/0:23,0:23:66.21:0,66,1240	0/0:17,0:17:48.16:0,48,907	0/0:39,0:39:99:0,117,2127	0/0:24,0:24:69.22:0,69,1289	1/1:1,19:20:54.18:826,54,0	0/0:24,0:24:72.25:0,72,1371	1/1:0,2:2:3.01:46,3,0
chr10	101850432	.	AAAAAAAC	A	4843.67	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=10.473;DP=511;FS=2.422;HRun=0;HaplotypeScore=146.8528;InbreedingCoeff=0.6829;MQ=60.83;MQ0=3;MQRankSum=-9.640;QD=27.84;ReadPosRankSum=-0.265;VQSLOD=4.7103;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:18:38.92:392,39,0	1/1:3,3:6:15.05:336,15,0	0/1:34,0:19:22.85:23,0,217	0/0:19,0:7:4.02:0,4,123	1/1:18,9:27:69.17:1212,69,0	0/0:17,0:17:51.17:0,51,1579	0/0:14,0:14:42.14:0,42,1369	0/0:23,0:23:51.16:0,51,1458	0/0:12,0:12:27.07:0,27,802	0/0:16,0:15:42.12:0,42,1159	0/0:20,0:20:57.16:0,57,1702	1/1:8,11:18:54.13:1071,54,0	1/1:6,5:11:28.33:533,28,0	0/0:17,0:17:43.36:0,43,1207	0/0:17,0:17:51.15:0,51,1558	1/1:8,9:17:51.17:1037,51,0	0/0:19,0:19:6.76:0,7,810	0/1:8,0:7:35.35:58,0,35	0/0:15,0:15:33.03:0,33,641	0/0:18,0:18:48.16:0,48,1632	0/0:7,0:7:21.07:0,21,672	0/0:22,0:22:39.39:0,39,1342	0/0:19,0:19:45.10:0,45,1264	0/0:23,0:23:54.12:0,54,1364	0/0:26,0:26:72.22:0,72,2136	0/1:32,0:31:99:181,0,310	0/0:30,0:30:90.29:0,90,2551	./.
chr10	101850433	.	AAAAAAC	A	3817.07	PASS	AB=1.000;AC=16;AF=0.296;AN=54;BaseQRankSum=12.032;DP=518;FS=5.627;HRun=0;HaplotypeScore=143.3290;InbreedingCoeff=0.6586;MQ=60.72;MQ0=3;MQRankSum=-9.552;QD=19.47;ReadPosRankSum=-1.336;VQSLOD=2.9678;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,8:18:38.43:651,38,0	1/1:6,0:6:17.54:229,18,0	0/1:34,0:19:17.77:18,0,215	0/1:20,0:7:5.67:6,0,101	1/1:26,2:28:69.52:933,70,0	0/0:18,0:18:54.17:0,54,1453	0/0:15,0:15:45.15:0,45,1296	0/0:22,0:22:55.06:0,55,1445	0/0:12,0:12:27.05:0,27,728	0/0:16,0:15:42.13:0,42,1081	0/0:21,0:21:57.14:0,57,1513	1/1:20,0:19:55.44:708,55,0	1/1:11,0:11:28.81:352,29,0	0/0:18,0:18:27.68:0,28,1124	0/0:18,0:18:52.97:0,53,1455	1/1:17,0:17:50.08:659,50,0	0/0:19,0:19:25.58:0,26,820	0/1:8,0:7:44.84:54,0,45	0/0:15,0:15:33.05:0,33,597	0/0:19,0:19:50.53:0,51,1491	0/0:7,0:7:21.06:0,21,582	0/0:22,0:22:20.92:0,21,1233	0/0:19,0:19:45.10:0,45,1172	0/0:23,0:23:57.12:0,57,1332	0/0:25,0:25:72.22:0,72,2038	0/1:32,0:31:99:209,0,231	0/0:30,0:30:90.28:0,90,2333	./.
chr10	101850455	.	AAC	A	467.87	PASS	AB=0.912;AC=5;AF=0.093;AN=54;BaseQRankSum=8.497;DP=512;FS=5.681;HRun=0;HaplotypeScore=119.2417;InbreedingCoeff=0.2637;MQ=51.33;MQ0=11;MQRankSum=-5.656;QD=5.20;ReadPosRankSum=-1.662;VQSLOD=2.3312;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:19:29.89:0,30,455	0/0:7,0:7:6.10:0,6,131	0/0:24,1:3:2.41:0,2,38	0/1:24,0:5:4.01:4,0,42	0/1:29,0:29:2.64:3,0,666	0/0:16,0:16:48.15:0,48,768	0/0:18,0:18:51.11:0,51,783	0/0:27,0:27:68.83:0,69,965	0/0:13,0:13:17.76:0,18,457	0/0:15,0:14:41.62:0,42,596	0/0:23,0:22:66.10:0,66,956	0/0:18,0:17:11.52:0,12,330	0/0:13,0:13:17.40:0,17,233	0/0:19,0:19:35.96:0,36,679	0/0:23,0:23:69.22:0,69,1038	0/0:18,0:18:0.11:0,0,303	0/0:12,0:12:35.89:0,36,464	1/1:9,0:8:10.78:111,11,0	0/0:19,0:17:48.09:0,48,717	0/0:21,0:21:44.13:0,44,930	0/0:6,0:6:18.06:0,18,282	0/0:19,0:19:57.07:0,57,819	0/0:15,0:15:45.10:0,45,677	0/0:16,0:16:48.14:0,48,756	0/0:26,0:26:78.19:0,78,1138	0/1:18,10:27:66.25:453,0,66	0/0:30,0:30:54.66:0,55,1122	./.
chr10	101850464	.	AC	A	379.53	PASS	AB=0.939;AC=7;AF=0.125;AN=56;BaseQRankSum=7.903;DP=554;FS=1.242;HRun=1;HaplotypeScore=111.7987;InbreedingCoeff=0.7139;MQ=52.06;MQ0=14;MQRankSum=-4.779;QD=5.35;ReadPosRankSum=-0.957;VQSLOD=0.1030;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:20:27.26:0,27,442	0/0:10,0:10:26.99:0,27,269	1/1:27,0:3:2.70:8,3,0	0/0:29,2:5:8.70:0,9,83	0/0:32,0:32:81.43:0,81,880	0/0:19,0:19:56.68:0,57,645	0/0:21,0:21:50.85:0,51,650	0/0:28,0:26:72.77:0,73,888	0/0:16,0:16:39.27:0,39,445	0/0:16,0:16:37.12:0,37,552	0/0:27,0:26:78.09:0,78,951	0/0:19,0:18:53.09:0,53,513	0/0:12,0:12:30.11:0,30,324	0/0:18,0:18:35.16:0,35,569	0/0:23,0:23:63.18:0,63,830	0/0:18,0:18:52.16:0,52,515	0/0:11,0:11:32.93:0,33,379	1/1:3,5:8:16.78:206,17,0	0/0:23,0:21:57:0,57,693	0/0:21,0:21:48.64:0,49,742	0/0:7,0:7:17.94:0,18,224	0/0:21,0:21:60.15:0,60,768	0/0:17,0:17:16.55:0,17,477	0/0:17,0:17:51.13:0,51,672	0/0:24,0:23:66:0,66,807	0/1:29,1:29:17.53:254,0,18	0/0:28,0:28:43.54:0,44,889	1/1:3,1:3:7.18:38,7,0
chr10	101850469	.	CA	C	2140.90	PASS	AB=0.880;AC=17;AF=0.304;AN=56;BaseQRankSum=11.796;DP=562;FS=8.091;HRun=12;HaplotypeScore=104.2837;InbreedingCoeff=0.5096;MQ=51.81;MQ0=18;MQRankSum=-4.760;QD=10.87;ReadPosRankSum=1.378;VQSLOD=2.7732;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,15:21:41.32:320,41,0	1/1:1,8:9:23.91:186,24,0	0/0:31,0:2:3:0,3,27	0/0:32,0:7:0.97:0,1,27	1/1:4,26:30:68.70:532,69,0	0/1:16,5:21:42.66:43,0,322	0/0:15,2:19:4.26:0,4,362	0/0:31,0:30:38.93:0,39,534	0/0:16,0:16:42.80:0,43,411	0/0:16,0:16:42.08:0,42,422	0/0:25,0:26:71.79:0,72,685	1/1:3,17:19:50.78:390,51,0	1/1:1,11:12:32.81:253,33,0	0/0:17,1:18:29.27:0,29,447	0/0:21,0:21:38.84:0,39,528	1/1:2,15:17:17.12:317,17,0	0/0:11,0:11:29.92:0,30,281	0/0:8,0:7:15.85:0,16,117	0/0:26,0:22:48:0,48,458	0/1:17,3:21:31.78:32,0,372	0/1:5,1:6:11.23:11,0,73	0/0:21,1:21:27.76:0,28,450	0/0:18,0:17:28.11:0,28,454	0/0:15,0:17:44.74:0,45,417	0/0:21,0:21:50.87:0,51,488	0/1:26,5:29:14.99:212,0,15	0/0:26,1:28:32.29:0,32,485	0/1:4,0:3:20.95:37,0,21
chr10	101850498	.	C	CAA	1381.09	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.446;DP=532;FS=4.432;HRun=9;HaplotypeScore=104.2496;InbreedingCoeff=0.9660;MQ=62.37;MQ0=8;MQRankSum=-5.600;QD=19.45;ReadPosRankSum=0.633;VQSLOD=2.5495;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,17:21:40.38:603,40,0	0/0:9,0:9:27.01:0,27,266	0/0:24,0:10:17.26:0,17,165	0/0:26,0:15:17.19:0,17,169	0/0:25,0:25:56.88:0,57,649	0/0:20,0:20:48.11:0,48,511	0/0:12,0:13:23.97:0,24,247	0/0:32,0:32:66.09:0,66,687	0/0:14,0:14:39.09:0,39,415	0/0:14,0:14:36.07:0,36,382	0/0:25,0:25:63.14:0,63,661	0/0:21,0:21:48.03:0,48,498	0/0:17,0:17:48.05:0,48,487	0/0:24,0:24:51.07:0,51,531	0/0:25,0:26:71.90:0,72,745	0/0:17,0:17:35.99:0,36,370	0/0:10,0:11:17.12:0,17,245	1/1:12,0:12:24.07:273,24,0	0/0:14,0:11:30.07:0,30,318	0/0:24,0:25:42.74:0,43,443	0/0:4,0:4:8.99:0,9,87	0/0:19,0:19:36:0,36,437	0/0:22,0:22:53.76:0,54,539	0/0:13,0:13:20.98:0,21,216	0/0:20,0:20:48.07:0,48,509	1/1:23,0:23:13.16:404,13,0	0/0:22,0:22:48.09:0,48,511	1/1:13,0:13:27.04:259,27,0
chr10	101850505	.	A	AAC	1810.58	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=1.796;DP=513;FS=1.925;HRun=0;HaplotypeScore=97.2259;InbreedingCoeff=0.8148;MQ=65.44;MQ0=2;MQRankSum=-6.973;QD=24.14;ReadPosRankSum=2.557;VQSLOD=4.1531;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:24:51.31:266,0,51	0/0:9,0:9:27.09:0,27,384	0/0:17,0:12:24.04:0,24,296	0/0:21,0:14:28.39:0,28,310	0/0:26,0:26:74.55:0,75,989	0/0:20,0:20:48.16:0,48,695	0/0:11,0:11:24.97:0,25,349	0/0:33,0:33:93.25:0,93,1207	0/0:13,0:13:39.13:0,39,565	0/0:15,0:15:41.72:0,42,559	0/0:24,0:24:72.22:0,72,993	0/0:20,0:20:57.11:0,57,756	0/0:17,0:17:48.16:0,48,688	0/0:21,0:21:51.17:0,51,738	0/0:27,0:27:72.21:0,72,1020	0/0:18,0:18:51.02:0,51,627	0/0:11,0:11:29.65:0,30,377	1/1:0,13:14:24.08:420,24,0	0/0:13,0:12:33.10:0,33,460	0/0:22,0:22:57.11:0,57,747	0/0:5,0:5:15.03:0,15,181	0/0:18,0:18:53.61:0,54,691	0/0:20,0:20:60.14:0,60,803	0/0:12,0:12:33.06:0,33,403	0/0:22,0:22:63.17:0,63,830	1/1:5,15:20:10.65:793,11,0	0/0:23,0:23:66.16:0,66,852	1/1:3,13:16:27.09:475,27,0
chr10	101851040	.	A	AT	2792.52	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-10.438;DP=548;FS=5.271;HRun=9;HaplotypeScore=68.1914;InbreedingCoeff=0.9861;MQ=80.38;MQ0=0;MQRankSum=-0.728;QD=23.67;ReadPosRankSum=1.604;VQSLOD=4.6925;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,32:36:87.24:962,87,0	1/1:1,10:11:30.08:332,30,0	0/0:22,0:22:46.02:0,46,395	0/0:10,0:10:9.95:0,10,147	1/1:5,22:27:54.11:584,54,0	0/0:24,0:24:59.95:0,60,516	0/0:25,0:25:68.97:0,69,595	0/0:28,0:28:68.89:0,69,591	0/0:16,0:16:44.97:0,45,387	0/0:15,0:15:35.99:0,36,313	0/0:22,0:22:56.96:0,57,495	1/1:3,11:14:27.07:299,27,0	1/1:1,12:13:30.08:332,30,0	0/0:16,0:16:41.99:0,42,365	0/0:22,0:23:65:0,65,549	1/1:1,16:17:22.07:472,22,0	0/0:28,0:28:77.94:0,78,666	0/0:1,0:13:25.88:0,26,92	0/0:29,0:29:47.48:0,47,551	0/0:21,0:21:47.96:0,48,412	0/0:13,0:12:17.98:0,18,156	0/0:17,0:17:47.99:0,48,417	0/0:13,0:13:26.99:0,27,234	0/0:27,0:27:59.94:0,60,517	0/0:17,0:17:47.97:0,48,414	0/0:5,0:25:49.51:0,50,196	0/0:16,0:16:44.99:0,45,391	0/0:0,0:10:20.37:0,20,60
chr10	101851819	.	TGTGTGTGTGG	T	507.80	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.256;DP=426;FS=11.635;HRun=0;HaplotypeScore=130.5581;InbreedingCoeff=0.8270;MQ=73.11;MQ0=0;MQRankSum=-4.681;QD=16.38;ReadPosRankSum=-1.244;VQSLOD=1.9225;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:84.74:0,85,2248	0/0:5,0:5:12.04:0,12,409	0/0:35,0:31:82.27:0,82,2383	0/0:25,0:22:24.40:0,24,1475	0/0:23,0:23:55.06:0,55,1771	0/0:17,0:17:46.38:0,46,1322	0/0:10,0:10:30.10:0,30,790	0/0:9,0:9:27.09:0,27,878	0/0:22,0:22:55.24:0,55,1366	0/0:9,0:9:27.05:0,27,666	0/0:12,0:12:33.11:0,33,959	0/0:12,0:12:33.09:0,33,1040	0/0:17,0:17:42.14:0,42,1360	0/0:14,0:14:40.01:0,40,957	0/0:17,0:17:39.01:0,39,1101	0/0:21,0:21:60.21:0,60,2150	0/0:25,0:25:69.18:0,69,1936	1/1:7,0:7:2.98:22,3,0	0/0:12,0:12:33.10:0,33,1064	0/0:8,0:8:10.39:0,10,214	0/0:17,0:18:39.07:0,39,1069	0/0:7,0:7:21.05:0,21,496	0/0:7,0:7:18.06:0,18,507	0/0:15,0:15:33.07:0,33,837	0/0:10,0:10:18.53:0,19,538	1/1:17,3:20:26.42:505,26,0	0/0:11,0:10:33.07:0,33,763	1/1:1,2:3:3.01:101,3,0
chr10	101851820	.	GTGTGTGT	G	368.93	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.457;DP=408;FS=11.971;HRun=0;HaplotypeScore=102.5569;InbreedingCoeff=0.8304;MQ=73.95;MQ0=1;MQRankSum=-3.860;QD=21.70;ReadPosRankSum=-0.449;VQSLOD=2.4854;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.25:0,84,2120	0/0:5,0:5:15.05:0,15,471	0/0:33,0:30:83.46:0,83,2132	0/0:24,0:21:18.09:0,18,1321	0/0:23,0:23:54.64:0,55,1583	0/0:17,0:16:44.61:0,45,1202	0/0:10,0:10:30.10:0,30,712	0/0:9,0:9:27.09:0,27,808	0/0:22,0:22:48.25:0,48,1251	0/0:9,0:9:24.05:0,24,649	0/0:13,0:13:33.11:0,33,878	0/0:14,0:14:36.09:0,36,1031	0/0:17,0:17:42.12:0,42,1306	0/0:14,0:14:36.99:0,37,877	0/0:14,0:14:36.11:0,36,1018	0/0:21,0:21:60.21:0,60,1963	0/0:24,0:24:66.17:0,66,1732	1/1:1,0:1:2.98:22,3,0	0/0:12,0:12:33.09:0,33,979	0/0:8,0:8:10.80:0,11,213	0/0:17,0:18:39.07:0,39,1016	0/0:7,0:7:21.05:0,21,493	0/0:7,0:7:18.06:0,18,481	0/0:15,0:15:33.07:0,33,762	0/0:10,0:10:18.95:0,19,507	1/1:9,5:14:23.43:401,23,0	0/0:11,0:10:30.09:0,30,666	1/1:2,0:2:3.01:66,3,0
chr10	101851905	.	C	CT	967.90	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.429;DP=580;FS=0.750;HRun=0;HaplotypeScore=73.5975;InbreedingCoeff=0.9482;MQ=87.38;MQ0=0;MQRankSum=-7.908;QD=30.25;ReadPosRankSum=3.646;VQSLOD=3.8634;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1563	0/0:7,0:7:21.07:0,21,293	0/0:26,0:26:74.53:0,75,822	0/0:22,0:22:60.18:0,60,771	0/0:20,0:20:60.17:0,60,801	0/0:24,0:24:72.22:0,72,986	0/0:17,0:17:51.14:0,51,663	0/0:22,0:22:63.19:0,63,850	0/0:19,0:19:54.16:0,54,721	0/0:20,0:20:57.18:0,57,771	0/0:12,0:12:36.09:0,36,456	0/0:25,0:25:69.15:0,69,924	0/0:18,0:18:51.15:0,51,693	0/0:29,0:29:87.24:0,87,1148	0/0:31,0:31:93.22:0,93,1242	0/0:22,0:22:66.21:0,66,907	0/0:38,0:37:99:0,114,1574	1/1:0,3:3:6.02:86,6,0	0/0:28,0:28:84.28:0,84,1169	0/0:23,0:23:66.22:0,66,921	0/0:17,0:17:51.17:0,51,711	0/0:24,0:24:63.20:0,63,866	0/0:13,0:13:39.09:0,39,507	0/0:19,0:19:57.12:0,57,770	0/0:13,0:13:36.11:0,36,487	1/1:6,19:25:58.03:841,58,0	0/0:20,0:20:57.18:0,57,778	1/1:0,4:4:12.04:172,12,0
chr10	101851908	.	CATGGCCTT	C	2324.17	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.994;DP=596;FS=0.000;HRun=0;HaplotypeScore=157.5442;InbreedingCoeff=0.9660;MQ=89.11;MQ0=0;MQRankSum=-7.458;QD=72.63;ReadPosRankSum=2.977;VQSLOD=3.8495;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,5377	0/0:7,0:7:21.07:0,21,898	0/0:28,0:29:82.91:0,83,3100	0/0:23,0:23:69.24:0,69,2909	0/0:22,0:22:66.23:0,66,2919	0/0:23,0:23:69.24:0,69,3047	0/0:18,0:18:54.19:0,54,2448	0/0:19,0:19:57.20:0,57,2494	0/0:17,0:17:51.18:0,51,2361	0/0:21,0:21:60.21:0,60,2718	0/0:13,0:13:39.13:0,39,1775	0/0:25,0:25:75.26:0,75,3431	0/0:17,0:17:51.18:0,51,2355	0/0:31,0:31:93.32:0,93,4077	0/0:32,0:32:96.33:0,96,4441	0/0:24,0:24:72.23:0,72,3115	0/0:38,0:37:99:0,114,5075	1/1:0,3:3:9.03:210,9,0	0/0:31,0:31:90.30:0,90,3821	0/0:24,0:24:72.25:0,72,3238	0/0:20,0:20:60.21:0,60,2692	0/0:23,0:23:66.23:0,66,3056	0/0:13,0:13:39.13:0,39,1803	0/0:20,0:20:60.21:0,60,2755	0/0:15,0:15:42.14:0,42,1933	1/1:0,25:25:72.20:1905,72,0	0/0:19,0:19:57.20:0,57,2305	1/1:0,4:4:12.04:343,12,0
chr10	101852616	.	A	AAC	2451.59	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.814;DP=507;FS=2.605;HRun=0;HaplotypeScore=62.3988;InbreedingCoeff=0.8953;MQ=71.30;MQ0=6;MQRankSum=-1.453;QD=43.78;ReadPosRankSum=2.516;VQSLOD=4.9605;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.18:0,66,967	0/0:4,0:4:12.04:0,12,174	0/0:27,0:22:56.99:0,57,789	0/0:18,0:16:22.84:0,23,378	0/0:10,0:10:30.10:0,30,459	0/0:30,0:30:90.30:0,90,1358	0/0:16,0:16:48.16:0,48,720	0/0:35,0:35:93.30:0,93,1377	0/0:17,0:17:45.15:0,45,676	0/0:22,0:22:66.22:0,66,1002	0/0:18,0:18:48.16:0,48,725	0/0:17,0:17:51.16:0,51,760	0/0:18,0:18:51.17:0,51,771	0/0:22,0:22:57.18:0,57,847	0/0:17,0:17:48.16:0,48,731	0/0:20,0:20:60.19:0,60,888	0/0:23,1:24:8.39:0,8,860	1/1:2,19:21:3.92:769,4,0	0/0:19,0:18:54.18:0,54,813	0/0:14,0:14:42.14:0,42,638	0/0:17,0:17:48.16:0,48,725	0/0:4,0:4:12.04:0,12,179	0/0:13,0:13:36.12:0,36,546	0/0:13,0:13:36.12:0,36,551	0/0:7,0:7:18.06:0,18,275	1/1:0,25:25:75.24:1373,75,0	0/0:25,0:24:75.21:0,75,1085	1/1:0,10:10:24.08:442,24,0
chr10	101852830	.	CAT	C	88.78	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.882;DP=294;FS=5.343;HRun=0;HaplotypeScore=44.5464;InbreedingCoeff=0.6554;MQ=92.60;MQ0=10;MQRankSum=-1.054;QD=9.86;ReadPosRankSum=-0.784;VQSLOD=2.5151;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:15.05:0,15,200	0/0:5,0:5:15.04:0,15,230	0/0:38,0:25:48.02:0,48,887	0/0:72,0:37:39.25:0,39,929	0/0:4,0:4:12.04:0,12,201	0/0:8,0:8:24.08:0,24,375	0/0:13,0:13:35.83:0,36,478	0/0:21,0:20:42.13:0,42,686	0/0:3,0:3:9.03:0,9,129	0/0:12,0:12:36.11:0,36,589	0/0:7,0:7:15.05:0,15,255	0/0:6,0:6:17.64:0,18,181	0/0:5,0:5:12.04:0,12,185	0/0:1,0:1:3.01:0,3,32	0/0:7,0:7:18:0,18,309	0/0:4,0:4:9.03:0,9,138	0/0:11,0:11:33.11:0,33,490	1/1:0,4:4:6.02:77,6,0	0/0:9,0:9:24.96:0,25,334	0/0:5,0:5:15.05:0,15,232	0/0:15,0:15:36.11:0,36,498	0/0:1,0:1:3.01:0,3,52	0/0:7,0:7:21.05:0,21,304	0/0:7,0:7:12.03:0,12,140	0/0:7,0:7:18.06:0,18,294	1/1:0,2:2:6.02:86,6,0	0/0:12,0:12:33.11:0,33,495	1/1:2,1:1:3.01:38,3,0
chr10	101852902	.	CA	C	348.96	PASS	AB=0.818;AC=28;AF=0.667;AN=42;BaseQRankSum=-3.299;DP=123;FS=0.000;HRun=1;HaplotypeScore=28.6098;InbreedingCoeff=0.2725;MQ=33.03;MQ0=15;MQRankSum=-1.560;QD=3.88;ReadPosRankSum=-1.980;VQSLOD=-0.6587;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,1:4:2.92:17,3,0	./.	0/0:9,2:2:3.01:0,3,35	./.	0/1:0,1:2:0:0,0,0	0/1:4,5:8:14.58:23,0,15	1/1:6,1:6:14.74:94,15,0	1/1:6,3:8:8.90:74,9,0	1/1:1,3:4:2.97:20,3,0	0/1:5,1:3:0:0,0,0	1/1:5,0:5:1.24:3,1,0	./.	./.	1/1:0,2:1:2.90:16,3,0	0/1:0,0:1:0:0,0,0	0/0:1,0:1:0.47:0,0,1	./.	./.	1/1:0,1:1:3.01:37,3,0	./.	1/1:5,3:7:10.19:74,10,0	0/0:1,0:1:0:0,0,0	1/1:2,2:7:1.20:30,1,0	1/1:2,3:5:5.86:34,6,0	0/1:5,0:6:0:0,0,0	0/0:3,0:3:0.93:0,1,2	0/1:3,3:6:0:0,0,0	1/1:3,0:1:2.92:17,3,0
chr10	101855255	.	GAA	G	219	PASS	AB=0.845;AC=10;AF=0.179;AN=56;BaseQRankSum=-0.764;DP=327;FS=0.000;HRun=2;HaplotypeScore=151.3483;InbreedingCoeff=-0.2368;MQ=43.94;MQ0=15;MQRankSum=-1.395;QD=1.87;ReadPosRankSum=2.538;VQSLOD=-0.7486;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:4,1:4:27.96:28,0,71	0/1:4,6:10:99:131,0,136	0/0:9,0:3:9.03:0,9,151	0/0:12,0:7:6.02:0,6,99	0/0:14,6:18:33.53:0,34,264	0/1:8,1:7:17.94:18,0,174	0/0:13,0:13:27.64:0,28,499	0/0:13,0:12:36.08:0,36,622	0/0:16,0:15:36.06:0,36,483	0/0:17,1:17:5.04:0,5,507	0/1:14,2:16:3.46:3,0,266	0/1:12,2:14:20.28:20,0,406	0/0:12,2:14:6.49:0,6,367	0/0:8,0:7:11.82:0,12,172	0/0:13,0:11:31.70:0,32,411	0/1:13,1:12:0.25:0,0,378	0/1:6,1:3:28.75:29,0,57	0/0:3,0:3:6.49:0,6,121	0/0:9,0:9:26.08:0,26,352	0/0:10,0:10:25.69:0,26,209	0/0:1,0:1:3.01:0,3,46	0/0:21,0:20:53.53:0,54,542	0/0:9,1:10:23.98:0,24,233	0/0:7,0:6:3.69:0,4,50	0/1:15,4:18:92.15:92,0,308	0/0:11,0:13:34.94:0,35,479	0/1:12,1:12:12.23:12,0,278	0/1:7,3:9:17.05:17,0,216
chr10	101855256	.	A	AGG	2161.70	PASS	AB=0.982;AC=23;AF=0.411;AN=56;BaseQRankSum=9.653;DP=334;FS=6.002;HRun=2;HaplotypeScore=145.6970;InbreedingCoeff=-0.3847;MQ=43.65;MQ0=15;MQRankSum=0.050;QD=7.92;ReadPosRankSum=6.739;VQSLOD=0.5209;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:4:31.53:32,0,39	0/1:10,0:10:72.48:72,0,86	0/0:9,0:3:9:0,9,118	0/0:12,0:7:6.02:0,6,86	0/1:20,0:18:28.17:28,0,101	0/1:10,0:8:72.02:100,0,72	0/1:12,1:13:82.26:82,0,320	0/0:14,0:13:36.12:0,36,560	0/1:16,0:15:99:143,0,274	0/1:18,0:17:99:188,0,207	1/1:17,0:17:31.95:364,32,0	0/1:13,1:14:13.18:13,0,277	0/1:14,0:14:1.11:1,0,271	0/1:8,0:7:30.74:31,0,119	0/1:12,1:11:99:115,0,205	0/1:13,1:12:96.03:96,0,179	0/1:7,0:3:12.48:12,0,42	0/0:3,0:3:8.70:0,9,108	0/0:9,0:9:25.31:0,25,333	1/1:11,0:10:20.61:174,21,0	0/0:1,0:1:3.01:0,3,46	0/1:21,0:20:99:314,0,132	0/1:10,0:10:71.83:100,0,72	0/1:7,0:6:2.89:25,0,3	0/1:19,0:18:36.89:281,0,37	0/0:13,0:13:29.63:0,30,356	0/1:13,1:13:83.25:83,0,132	0/1:12,0:11:69.36:69,0,91
chr10	101855261	.	GA	G	1851.46	PASS	AB=0.857;AC=18;AF=0.321;AN=56;BaseQRankSum=10.042;DP=372;FS=2.691;HRun=2;HaplotypeScore=145.5518;InbreedingCoeff=-0.3616;MQ=42.40;MQ0=26;MQRankSum=-0.640;QD=7.35;ReadPosRankSum=4.752;VQSLOD=1.2340;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:4:7.84:0,8,90	0/1:10,0:10:19.95:20,0,153	0/0:9,0:3:6.02:0,6,83	0/0:12,0:7:6.02:0,6,65	0/1:20,1:19:19.23:19,0,104	0/1:9,1:8:73.60:81,0,74	0/1:14,0:14:13.01:13,0,343	0/0:16,0:14:42.09:0,42,549	0/1:15,2:15:99:126,0,254	0/1:15,3:17:83.04:83,0,245	1/1:10,9:19:16.30:302,16,0	0/0:15,0:15:41.82:0,42,405	0/0:15,0:14:15.20:0,15,335	0/1:8,0:7:14.08:14,0,112	0/1:12,2:11:80.68:81,0,217	0/0:16,0:13:1.98:0,2,284	0/1:8,1:5:29.92:30,0,59	0/0:3,0:3:8.52:0,9,92	0/0:14,0:14:29.72:0,30,356	0/1:9,7:14:25.51:228,0,26	0/0:1,0:1:3.01:0,3,42	0/1:10,12:20:99:359,0,167	0/1:9,5:12:90.66:187,0,91	0/1:5,4:7:12.20:81,0,12	0/1:10,10:19:99:302,0,100	0/0:14,0:13:34.72:0,35,372	0/1:13,2:14:71.84:72,0,181	0/1:16,0:14:12.41:12,0,154
chr10	101855264	.	GA	G	1440.79	PASS	AB=0.942;AC=19;AF=0.339;AN=56;BaseQRankSum=12.163;DP=385;FS=2.758;HRun=2;HaplotypeScore=148.0867;InbreedingCoeff=-0.4497;MQ=39.91;MQ0=30;MQRankSum=1.196;QD=5.34;ReadPosRankSum=6.003;VQSLOD=0.8423;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:4:17.81:18,0,89	0/1:11,1:12:20.58:21,0,142	0/0:9,0:3:6.02:0,6,82	0/0:11,0:6:6.02:0,6,72	0/1:21,0:19:80.97:81,0,81	0/1:10,1:8:37.35:55,0,37	0/1:12,2:14:16.46:16,0,277	0/0:17,0:14:42:0,42,445	0/1:15,2:15:99:104,0,171	0/1:14,5:18:99:166,0,174	1/1:15,5:19:15.19:264,15,0	0/0:16,0:16:38.06:0,38,337	0/0:15,0:14:0.42:0,0,246	0/1:8,0:7:16.64:17,0,80	0/1:12,2:11:55.05:55,0,183	0/1:16,0:13:38.53:39,0,261	0/0:9,0:5:2.55:0,3,65	0/0:3,0:3:9:0,9,91	0/0:15,0:15:37.07:0,37,300	0/1:14,2:14:59.96:143,0,60	0/0:1,0:1:3.01:0,3,32	0/1:22,1:20:99:226,0,143	0/1:13,1:12:53.15:89,0,53	0/1:9,0:7:17.26:59,0,17	0/1:19,1:19:83.83:192,0,84	0/0:19,0:16:1.40:0,1,318	0/1:15,0:14:19.83:20,0,196	0/1:16,0:14:32.05:32,0,243
chr10	101855265	.	A	AGG	2980.13	PASS	AB=0.961;AC=22;AF=0.393;AN=56;BaseQRankSum=12.635;DP=396;FS=2.849;HRun=1;HaplotypeScore=158.6628;InbreedingCoeff=-0.5617;MQ=40.26;MQ0=31;MQRankSum=0.324;QD=9.00;ReadPosRankSum=6.248;VQSLOD=0.5936;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:4,1:4:35.87:36,0,99	0/1:12,0:12:75.35:75,0,133	0/0:9,0:3:6.02:0,6,90	0/0:11,0:6:6.02:0,6,84	0/1:21,0:19:57.56:225,0,58	0/1:11,0:8:38.69:83,0,39	0/1:15,0:14:54.30:54,0,304	0/0:17,0:14:41.93:0,42,469	0/1:18,0:16:99:142,0,161	0/1:19,0:18:99:318,0,178	1/1:21,0:20:2.64:410,3,0	0/1:16,0:16:3.34:3,0,224	0/1:16,0:15:18.83:19,0,265	0/1:6,3:8:35.24:35,0,82	0/1:15,0:12:99:140,0,187	0/1:15,1:13:89.02:89,0,261	0/0:9,0:5:8.49:0,8,77	0/0:3,0:3:8.99:0,9,109	0/0:15,0:15:40.99:0,41,344	0/1:17,0:15:88.69:282,0,89	0/0:1,0:1:2.99:0,3,24	0/1:24,0:21:99:376,0,156	0/1:14,0:12:49.13:207,0,49	0/1:9,0:7:15.55:106,0,16	0/1:22,0:21:86.06:297,0,86	0/1:17,2:16:49.76:50,0,266	0/1:12,4:15:78.48:78,0,175	0/1:16,0:14:99:110,0,202
chr10	101856405	.	G	GCA	2132.59	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.107;DP=668;FS=2.033;HRun=0;HaplotypeScore=96.1435;InbreedingCoeff=0.9997;MQ=88.73;MQ0=0;MQRankSum=-5.182;QD=48.47;ReadPosRankSum=1.975;VQSLOD=4.8881;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,43:44:99:2227,120,0	0/0:12,0:12:36.12:0,36,529	0/0:23,0:23:59.99:0,60,793	0/0:26,0:26:71.25:0,71,952	0/0:26,0:26:78.26:0,78,1149	0/0:21,0:21:57.18:0,57,814	0/0:15,0:15:45.15:0,45,662	0/0:30,0:30:87.29:0,87,1281	0/0:27,0:27:81.27:0,81,1187	0/0:16,0:16:42.14:0,42,618	0/0:13,0:13:39.13:0,39,572	0/0:24,0:24:69.23:0,69,1014	0/0:31,0:31:90.30:0,90,1322	0/0:18,0:18:54.18:0,54,792	0/0:21,0:21:60.20:0,60,883	0/0:24,0:24:66.21:0,66,954	0/0:25,0:25:72.24:0,72,1056	0/0:16,0:16:45.15:0,45,663	0/0:22,0:22:63.21:0,63,923	0/0:34,0:34:99:0,99,1458	0/0:36,0:36:99:0,105,1521	0/0:17,0:17:51.17:0,51,750	0/0:21,0:21:57.19:0,57,837	0/0:25,0:25:69.22:0,69,995	0/0:22,0:22:63.21:0,63,927	0/0:27,0:27:75.24:0,75,1084	0/0:30,0:30:87.28:0,87,1260	0/0:22,0:22:63.21:0,63,924
chr10	101856682	.	AG	A	3218.29	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.350;DP=505;FS=9.572;HRun=9;HaplotypeScore=51.6862;InbreedingCoeff=0.9908;MQ=74.54;MQ0=0;MQRankSum=-1.607;QD=22.51;ReadPosRankSum=1.994;VQSLOD=4.1912;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:63.03:576,63,0	1/1:0,8:8:18.01:165,18,0	0/0:14,0:14:29.61:0,30,301	0/0:7,0:7:10.18:0,10,80	1/1:2,23:25:65.96:594,66,0	0/0:32,0:32:87.23:0,87,984	0/0:18,0:18:39.12:0,39,450	0/0:24,0:24:48.10:0,48,518	0/0:17,0:17:36.11:0,36,415	0/0:24,0:24:63.18:0,63,719	0/0:24,0:24:66.13:0,66,713	1/1:0,12:12:30.02:275,30,0	1/1:1,11:12:30.01:275,30,0	0/0:12,0:12:36.11:0,36,415	0/0:13,0:13:33.08:0,33,362	1/1:0,16:16:48.03:439,48,0	0/0:21,0:21:60.11:0,60,656	1/1:0,15:15:41.98:376,42,0	0/0:13,0:13:35.91:0,36,406	0/0:23,0:23:54.16:0,54,623	0/0:10,0:10:30.08:0,30,336	0/0:17,1:18:23.69:0,24,526	0/0:23,0:23:51.15:0,51,588	0/0:17,0:17:39.12:0,39,450	0/0:21,0:21:60.15:0,60,672	1/1:4,16:20:42:378,42,0	0/0:31,0:31:70.73:0,71,787	1/1:0,13:13:39.02:357,39,0
chr10	101856936	.	TTCTA	T	1259.40	PASS	AB=0.980;AC=10;AF=0.208;AN=48;BaseQRankSum=1.526;DP=444;FS=2.350;HRun=0;HaplotypeScore=92.5542;InbreedingCoeff=0.7102;MQ=61.34;MQ0=3;MQRankSum=1.419;QD=10.76;ReadPosRankSum=0.310;VQSLOD=2.6482;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:17:19.86:0,20,253	0/0:4,0:5:12.03:0,12,194	./.	./.	0/1:23,1:24:3.68:4,0,691	0/0:21,0:21:30.10:0,30,698	./.	./.	0/0:5,0:5:6.02:0,6,114	0/0:16,0:16:36.12:0,36,772	0/0:16,0:16:21.07:0,21,468	0/0:11,0:14:12.04:0,12,199	0/1:15,0:16:76.13:76,0,107	0/0:12,0:12:15.03:0,15,303	0/0:10,0:10:21.07:0,21,422	0/0:9,0:12:16.47:0,16,251	0/0:23,0:23:33.11:0,33,688	0/0:29,0:29:36.10:0,36,633	1/1:15,7:22:21.07:318,21,0	1/1:11,17:28:44.95:558,45,0	1/1:3,4:7:9.03:137,9,0	0/0:13,0:13:18.06:0,18,417	0/0:18,0:18:33.10:0,33,701	0/0:6,0:6:15.05:0,15,347	0/0:7,0:16:15.05:0,15,274	0/0:27,0:27:36.11:0,36,687	1/1:10,9:18:21.07:320,21,0	0/0:12,0:12:30.10:0,30,583
chr10	101857008	.	CTCTATCTA	C	1785.21	PASS	AB=0.727;AC=17;AF=0.304;AN=56;BaseQRankSum=8.889;DP=508;FS=8.683;HRun=0;HaplotypeScore=156.9612;InbreedingCoeff=0.8096;MQ=58.74;MQ0=6;MQRankSum=-7.950;QD=11.52;ReadPosRankSum=-1.389;VQSLOD=2.0860;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:25:5.56:83,6,0	1/1:3,2:5:6.02:115,6,0	0/0:31,0:9:6.02:0,6,166	0/0:16,0:6:1.25:0,1,3	1/1:13,15:28:14.73:357,15,0	0/0:18,0:18:39.13:0,39,1538	0/0:6,0:6:9.01:0,9,131	0/0:47,0:45:63.21:0,63,1808	0/0:12,0:12:36.11:0,36,1279	0/0:20,0:20:33.11:0,33,1270	0/0:19,0:19:39.13:0,39,1448	1/1:5,9:14:9.03:190,9,0	1/1:11,7:17:17.97:426,18,0	0/0:10,0:10:21.07:0,21,779	0/0:17,0:17:45.14:0,45,1483	1/1:4,8:12:9.03:229,9,0	0/0:27,0:27:51.13:0,51,1557	1/1:17,0:17:8.80:131,9,0	0/0:14,0:14:27.08:0,27,870	0/0:27,0:27:48.16:0,48,1847	0/0:9,0:9:15.05:0,15,482	0/0:8,0:8:15.05:0,15,591	0/0:18,0:18:30.09:0,30,1090	0/0:8,0:8:12.04:0,12,405	0/0:19,0:19:45.15:0,45,1702	1/1:10,0:27:24.11:395,24,0	0/0:26,0:26:54.19:0,54,2091	0/1:5,0:8:4.19:49,0,4
chr10	101857042	.	C	CTG	138.22	PASS	AB=1.000;AC=4;AF=0.074;AN=54;BaseQRankSum=2.175;DP=450;FS=14.218;HRun=0;HaplotypeScore=90.9703;InbreedingCoeff=0.3810;MQ=59.31;MQ0=9;MQRankSum=-4.311;QD=3.95;ReadPosRankSum=-1.028;VQSLOD=1.0567;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:14.41:0,14,83	0/0:7,0:7:11.11:0,11,55	0/1:15,0:6:20.84:23,0,21	./.	0/0:22,0:22:28.44:0,28,170	0/0:19,0:18:48.07:0,48,572	0/0:9,0:9:24.04:0,24,293	0/0:32,0:32:78.11:0,78,889	0/0:13,0:13:39.08:0,39,470	0/0:14,0:14:42.12:0,42,549	0/0:18,0:18:48.95:0,49,588	0/0:16,0:16:18.08:0,18,98	0/0:12,0:12:15.73:0,16,128	0/0:9,0:9:27.06:0,27,337	0/0:15,0:15:45.10:0,45,553	0/0:11,0:11:17.14:0,17,94	0/0:27,0:27:41.91:0,42,794	1/1:6,9:15:4.17:198,4,0	0/0:22,0:20:57.14:0,57,735	0/0:22,0:22:57.10:0,57,681	0/0:7,0:7:14.80:0,15,182	0/0:5,0:5:14.99:0,15,140	0/0:14,0:14:39.06:0,39,467	0/0:4,0:4:12.01:0,12,130	0/0:22,0:22:54.14:0,54,692	0/0:26,0:26:43.40:0,43,266	0/0:30,0:30:78.23:0,78,1037	0/1:5,0:5:6.99:19,0,7
chr10	101857617	.	AGTTGTGTACCC	A	6389.62	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.859;DP=527;FS=13.601;HRun=0;HaplotypeScore=178.4392;InbreedingCoeff=0.9905;MQ=84.68;MQ0=0;MQRankSum=-12.805;QD=84.07;ReadPosRankSum=1.763;VQSLOD=4.2533;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,6491	1/1:0,5:5:12.04:435,12,0	0/0:22,0:22:60.19:0,60,2537	0/0:17,0:17:48.14:0,48,1758	1/1:1,11:12:27.09:591,27,0	0/0:19,0:19:57.15:0,57,3010	0/0:24,0:24:72.25:0,72,4144	0/0:18,0:18:51.18:0,51,2473	0/0:21,0:21:60.21:0,60,3428	0/0:11,0:11:33.11:0,33,1864	0/0:14,0:14:42.14:0,42,2323	1/1:2,21:23:63.19:2258,63,0	1/1:0,19:19:53.76:1921,54,0	0/0:18,0:18:54.19:0,54,2747	0/0:18,0:18:54.17:0,54,2985	1/1:4,13:17:33.11:1185,33,0	0/0:33,0:33:96.33:0,96,5151	0/0:16,0:16:48.16:0,48,2634	0/0:16,0:16:48.16:0,48,2556	0/0:15,0:15:45.15:0,45,2447	0/0:29,0:29:81.26:0,81,4264	0/0:11,0:11:33.11:0,33,1903	0/0:13,0:13:39.12:0,39,1990	0/0:23,0:23:63.22:0,63,3459	0/0:27,0:27:78.27:0,78,4289	0/0:19,0:19:54.19:0,54,3147	0/0:21,0:21:63.22:0,63,3270	0/0:6,0:6:18.06:0,18,965
chr10	101857998	.	GCA	G	974.81	PASS	AB=0.853;AC=28;AF=0.538;AN=52;BaseQRankSum=8.950;DP=544;FS=18.646;HRun=0;HaplotypeScore=91.2294;InbreedingCoeff=0.1026;MQ=56.79;MQ0=10;MQRankSum=-6.429;QD=2.71;ReadPosRankSum=2.905;VQSLOD=0.6856;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:36:22.73:112,23,0	1/1:0,0:2:5.68:28,6,0	./.	./.	1/1:11,0:16:5.68:28,6,0	0/1:19,3:22:78.14:78,0,206	0/1:26,3:29:11.66:12,0,247	0/0:18,0:18:6.02:0,6,88	0/0:12,0:12:12.04:0,12,173	0/1:19,2:21:43.58:44,0,163	0/0:15,0:15:30.09:0,30,411	1/1:7,0:16:16.38:92,16,0	1/1:8,0:10:5.68:28,6,0	0/1:13,4:17:41.41:41,0,221	0/1:15,2:18:61.84:62,0,116	1/1:7,0:18:28.41:139,28,0	0/0:26,3:28:0.37:0,0,387	0/1:21,9:30:59.84:143,0,60	1/1:12,0:11:2.84:14,3,0	0/1:16,2:18:8.66:9,0,274	0/1:21,2:23:14.68:15,0,204	0/1:9,6:15:99:104,0,155	0/0:14,0:14:12.04:0,12,179	0/0:28,0:31:30.09:0,30,427	0/0:13,0:16:30.06:0,30,366	1/1:17,0:25:14.20:69,14,0	0/1:15,0:18:33.70:34,0,278	1/1:5,0:14:19.89:98,20,0
chr10	101862411	.	TAACATGGGAAG	T	14443.39	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=16.735;DP=650;FS=1.581;HRun=0;HaplotypeScore=218.8971;InbreedingCoeff=0.9973;MQ=72.84;MQ0=0;MQRankSum=-16.707;QD=80.24;ReadPosRankSum=3.308;VQSLOD=4.9104;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,21:26:48.12:1649,48,0	1/1:0,15:15:39.13:1411,39,0	0/0:15,0:15:42.14:0,42,2296	0/0:29,0:27:80.84:0,81,3791	1/1:6,24:30:55.07:1959,55,0	0/0:24,0:24:72.25:0,72,4053	0/0:18,0:18:51.18:0,51,2973	0/0:30,0:30:87.29:0,87,4443	0/0:18,0:18:54.19:0,54,3068	0/0:35,0:35:99:0,100,5437	0/0:27,0:27:81.26:0,81,4191	1/1:2,20:22:57.20:2066,57,0	1/1:0,26:26:69.24:2501,69,0	0/0:21,0:21:63.20:0,63,3456	0/0:24,0:23:69.24:0,69,3757	1/1:3,21:24:51.18:1849,51,0	0/0:30,0:30:87.28:0,87,4789	1/1:1,9:10:27.09:979,27,0	0/0:22,0:22:63.21:0,63,3305	0/0:28,0:28:84.29:0,84,4563	0/0:28,0:28:84.29:0,84,4796	0/0:26,0:26:69.22:0,69,3735	0/0:19,0:19:54.19:0,54,2923	0/0:25,0:25:72.25:0,72,3944	0/0:24,0:24:72.22:0,72,3802	1/1:2,17:19:45.15:1486,45,0	0/0:27,0:27:78.27:0,78,4183	1/1:0,8:8:15.05:544,15,0
chr10	101862540	.	T	TG	7744.57	PASS	AB=0.917;AC=53;AF=0.946;AN=56;BaseQRankSum=-1.173;DP=638;FS=15.129;HRun=1;HaplotypeScore=174.8458;InbreedingCoeff=0.5765;MQ=79.46;MQ0=0;MQRankSum=-0.164;QD=12.57;ReadPosRankSum=-0.875;VQSLOD=2.2207;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:16.47:160,16,0	1/1:5,0:5:13.33:56,13,0	0/0:21,1:22:4.63:0,5,412	0/1:10,1:11:6.41:6,0,206	1/1:17,4:21:55.46:314,55,0	1/1:24,0:24:62.37:278,62,0	1/1:20,0:20:48.61:221,49,0	1/1:34,0:34:84.64:580,85,0	1/1:29,0:29:73.80:330,74,0	1/1:30,0:30:86.90:642,87,0	1/1:17,0:17:39.07:229,39,0	1/1:31,0:31:58.70:292,59,0	1/1:22,0:22:19.36:121,19,0	1/1:28,0:28:76.93:361,77,0	1/1:24,0:24:42.65:251,43,0	1/1:28,0:28:66.05:302,66,0	1/1:26,0:26:57.94:248,58,0	1/1:12,0:12:17.19:67,17,0	1/1:21,0:21:54.16:337,54,0	1/1:22,2:24:50.13:434,50,0	1/1:33,0:33:87.02:417,87,0	1/1:23,0:23:61.35:407,61,0	1/1:18,1:19:22.79:306,23,0	1/1:25,0:25:65.69:316,66,0	1/1:26,0:26:67.13:364,67,0	1/1:16,1:17:45.27:319,45,0	1/1:28,0:28:47.60:300,48,0	1/1:15,0:15:11.37:87,11,0
chr10	101863617	.	GGT	G	615.63	PASS	AB=0.933;AC=16;AF=0.308;AN=52;BaseQRankSum=3.817;DP=940;FS=0.642;HRun=0;HaplotypeScore=154.1852;InbreedingCoeff=-0.2597;MQ=48.87;MQ0=23;MQRankSum=2.121;QD=1.16;ReadPosRankSum=1.342;VQSLOD=2.4050;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:36:23.86:0,24,473	0/0:13,0:13:15.05:0,15,227	./.	./.	0/1:33,1:33:17.44:17,0,305	0/1:19,1:21:23.40:23,0,227	1/1:17,9:27:20.89:233,21,0	0/0:36,0:33:11.91:0,12,128	0/1:27,4:30:63.91:64,0,369	0/1:32,2:34:37.40:37,0,288	0/1:17,0:18:18.32:18,0,166	0/1:31,1:32:22.63:23,0,272	0/0:29,0:29:23.50:0,24,307	0/1:26,3:29:42.74:43,0,195	0/1:37,2:38:27.64:28,0,444	0/1:24,4:30:76.68:77,0,417	0/1:41,2:45:18.14:18,0,584	0/0:22,0:22:23.29:0,23,367	0/0:25,0:24:12.04:0,12,167	0/0:17,0:17:17.80:0,18,239	0/1:79,10:87:99:159,0,1027	0/0:32,0:32:18.04:0,18,239	0/1:20,2:23:6.43:6,0,210	0/1:56,3:58:16.04:16,0,910	0/0:23,2:23:13.54:0,14,205	0/0:30,0:34:20.90:0,21,199	0/1:17,1:18:9.29:9,0,293	0/0:6,0:14:18.01:0,18,176
chr10	101863666	.	G	GGT	762.95	PASS	AB=0.795;AC=3;AF=0.054;AN=56;BaseQRankSum=1.360;DP=818;FS=8.389;HRun=0;HaplotypeScore=129.8469;InbreedingCoeff=-0.0639;MQ=51.34;MQ0=47;MQRankSum=0.326;QD=4.83;ReadPosRankSum=0.180;VQSLOD=2.6012;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,13:29:33.34:489,0,33	0/0:5,0:5:9.03:0,9,108	0/0:113,0:25:1.76:0,2,210	0/1:112,0:22:6.20:6,0,186	0/0:20,0:21:42.10:0,42,503	0/0:21,0:20:45.13:0,45,537	0/0:33,0:32:63.47:0,63,721	0/0:25,0:25:51.11:0,51,588	0/0:22,0:23:38.15:0,38,440	0/0:26,0:27:53.98:0,54,614	0/0:10,0:10:18.05:0,18,214	0/0:18,0:19:36.11:0,36,435	0/0:19,0:19:51.11:0,51,600	0/0:13,0:13:24.07:0,24,290	0/0:20,0:22:50.82:0,51,567	0/0:23,0:22:29.88:0,30,345	0/0:32,0:32:45:0,45,733	0/1:9,7:14:37.98:361,0,38	0/0:17,0:16:27.08:0,27,325	0/0:9,0:9:21.06:0,21,253	0/0:78,0:78:99:0,138,1590	0/0:18,0:18:44.61:0,45,496	0/0:14,0:14:21.06:0,21,245	0/0:53,0:53:99:0,99,1174	0/0:16,0:16:20.88:0,21,246	0/0:17,0:16:33.10:0,33,398	0/0:15,0:15:33.10:0,33,395	0/0:15,0:15:18.05:0,18,217
chr10	101863732	.	GGTGT	G	794.04	PASS	AB=0.813;AC=11;AF=0.196;AN=56;BaseQRankSum=1.763;DP=788;FS=14.201;HRun=0;HaplotypeScore=158.3594;InbreedingCoeff=0.7436;MQ=42.73;MQ0=54;MQRankSum=-0.716;QD=7.78;ReadPosRankSum=0.788;VQSLOD=1.9195;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:27:22.79:0,23,145	1/1:4,3:8:2.21:147,2,0	0/0:80,0:11:18:0,18,320	0/0:99,0:17:36.08:0,36,679	1/1:8,6:13:3.01:47,3,0	0/0:20,0:17:12.04:0,12,289	0/0:25,0:22:29.83:0,30,728	0/0:35,0:32:61.95:0,62,1426	0/0:17,0:17:21.07:0,21,523	0/0:17,0:15:42.13:0,42,888	0/0:13,0:13:18.06:0,18,452	1/1:7,8:17:12.01:173,12,0	1/1:10,8:16:30.07:469,30,0	0/0:15,0:15:39.13:0,39,933	0/0:18,0:17:24.08:0,24,458	1/1:6,9:16:6.02:104,6,0	0/0:32,0:30:64.32:0,64,1462	0/0:12,0:17:35.83:0,36,159	0/0:20,0:15:27.09:0,27,590	0/0:17,0:14:33.11:0,33,803	0/0:80,0:77:99:0,126,2866	0/0:25,0:25:38.87:0,39,787	0/0:15,0:15:27.09:0,27,635	0/0:57,0:57:99:0,112,2686	0/0:20,0:19:21.07:0,21,495	0/1:20,0:25:6.89:7,0,152	0/0:21,0:21:45.01:0,45,981	0/0:2,0:9:5.48:0,5,23
chr10	101863744	.	T	TA	298.78	PASS	AB=0.900;AC=11;AF=0.196;AN=56;BaseQRankSum=5.223;DP=746;FS=13.967;HRun=0;HaplotypeScore=133.8002;InbreedingCoeff=0.7737;MQ=41.85;MQ0=50;MQRankSum=-1.732;QD=3.28;ReadPosRankSum=-0.271;VQSLOD=2.4775;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:28:26.12:0,26,194	1/1:9,0:9:8.36:43,8,0	0/0:57,0:8:21.07:0,21,283	0/0:83,0:14:35.97:0,36,472	1/1:13,3:14:2.98:48,3,0	0/0:18,0:15:18.04:0,18,250	0/0:23,0:19:33.07:0,33,459	0/0:35,0:30:67.94:0,68,936	0/0:15,0:15:21.07:0,21,294	0/0:27,0:24:68.25:0,68,906	0/0:13,0:13:21.07:0,21,293	1/1:16,1:16:7.48:46,7,0	1/1:14,2:14:30.62:267,31,0	0/0:19,0:17:45.15:0,45,627	0/0:18,0:17:30.10:0,30,416	1/1:14,0:14:8.03:41,8,0	0/0:34,0:32:79.04:0,79,1057	0/1:16,1:17:9.18:9,0,178	0/0:16,0:11:24.96:0,25,374	0/0:19,0:16:32.85:0,33,461	0/0:80,0:75:99:0,153,2058	0/0:26,0:24:51:0,51,667	0/0:14,0:14:27.09:0,27,377	0/0:49,0:49:99:0,120,1676	0/0:22,0:19:26.73:0,27,376	0/0:28,0:27:29.16:0,29,275	0/0:20,0:20:48.14:0,48,661	0/0:9,0:8:5.34:0,5,23
chr10	101863749	.	AGT	A	139.84	PASS	AB=0.930;AC=12;AF=0.222;AN=54;BaseQRankSum=2.821;DP=761;FS=4.528;HRun=0;HaplotypeScore=141.7061;InbreedingCoeff=0.1577;MQ=41.54;MQ0=50;MQRankSum=1.539;QD=0.47;ReadPosRankSum=3.895;VQSLOD=2.1141;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:17.24:0,17,151	0/0:13,0:12:4.63:0,5,22	0/0:48,0:7:0:0,0,0	./.	0/0:15,0:17:4.09:0,4,20	0/0:18,0:15:15.05:0,15,201	0/0:24,0:20:9.01:0,9,113	1/1:31,1:26:3:33,3,0	0/0:14,0:15:6.02:0,6,76	0/0:30,0:28:5.07:0,5,309	0/0:14,0:16:5.91:0,6,59	0/1:18,0:19:11.18:11,0,42	0/1:13,0:12:2.45:2,0,39	0/0:21,0:19:12.02:0,12,154	0/0:19,0:18:12.46:0,12,147	0/0:12,0:14:5.52:0,6,25	0/1:33,1:32:45.38:45,0,330	0/0:18,0:17:2.50:0,2,9	1/1:15,1:9:3.01:33,3,0	0/0:15,2:16:12:0,12,139	0/1:77,1:72:46.67:47,0,390	0/0:28,0:27:10.81:0,11,251	0/0:14,0:16:10.28:0,10,130	0/1:50,1:51:50.35:50,0,354	0/0:25,0:24:15.05:0,15,207	0/1:27,0:31:2.99:3,0,50	1/1:16,3:19:5.74:47,6,0	0/0:10,0:9:0.47:0,0,1
chr10	101863761	.	T	TA	486.09	PASS	AB=0.829;AC=6;AF=0.107;AN=56;BaseQRankSum=7.581;DP=770;FS=23.739;HRun=0;HaplotypeScore=140.2422;InbreedingCoeff=0.1314;MQ=41.48;MQ0=47;MQRankSum=-2.771;QD=5.46;ReadPosRankSum=-0.259;VQSLOD=1.7646;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:32.43:0,32,433	0/1:11,2:13:71.92:72,0,118	0/0:34,0:10:19.73:0,20,277	0/0:67,0:14:33.04:0,33,454	1/1:18,3:19:3.89:50,4,0	0/0:19,0:16:18.05:0,18,251	0/0:22,0:18:32.93:0,33,457	0/0:29,0:23:57.12:0,57,754	0/0:16,0:16:21.07:0,21,291	0/0:40,0:37:99:0,108,1410	0/0:13,0:13:15.05:0,15,207	0/1:15,7:20:23.97:196,0,24	0/1:13,3:13:99:160,0,138	0/0:23,0:21:50.67:0,51,705	0/0:19,0:18:24.02:0,24,330	0/1:13,2:15:67.80:128,0,68	0/0:30,0:28:62.41:0,62,787	0/0:20,0:18:19.77:0,20,497	0/0:16,0:11:26.43:0,26,345	0/0:23,0:20:39.60:0,40,539	0/0:82,0:75:99:0,141,1868	0/0:27,0:25:60.09:0,60,780	0/0:22,0:21:42.14:0,42,571	0/0:57,0:57:99:0,132,1702	0/0:28,0:25:28.85:0,29,452	0/0:36,0:34:12.51:0,13,732	0/0:16,0:16:38.92:0,39,486	0/0:9,0:8:0:0,0,14
chr10	101863778	.	G	GCTCA	101.93	PASS	AB=0.959;AC=4;AF=0.071;AN=56;BaseQRankSum=4.637;DP=701;FS=8.732;HRun=0;HaplotypeScore=157.1310;InbreedingCoeff=0.3862;MQ=50.87;MQ0=32;MQRankSum=-4.963;QD=1.38;ReadPosRankSum=-1.690;VQSLOD=1.9911;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:32.67:0,33,646	0/0:12,0:11:8.17:0,8,382	0/0:33,0:18:42.13:0,42,814	0/0:45,0:26:65.77:0,66,1189	0/0:26,0:25:39.11:0,39,755	0/0:19,0:16:18.06:0,18,377	0/0:22,0:18:33.58:0,34,650	0/0:19,0:15:45.15:0,45,873	0/0:17,0:17:24.08:0,24,500	0/1:35,2:36:68.54:69,0,1791	0/0:12,2:14:21.07:0,21,436	0/0:23,0:22:21.14:0,21,342	0/0:14,0:12:13.96:0,14,438	0/0:19,0:18:35.66:0,36,727	0/0:20,0:19:32.72:0,33,637	0/0:12,0:12:21.07:0,21,436	0/0:28,0:26:52.67:0,53,990	0/0:15,0:13:24.02:0,24,375	0/0:15,0:12:33.11:0,33,655	0/0:24,0:21:45.15:0,45,937	0/0:64,0:57:98.09:0,98,2001	0/0:33,1:32:66.23:0,66,1368	0/0:26,1:26:48.16:0,48,990	0/0:48,0:48:99:0,102,1988	0/0:27,1:25:34:0,34,691	0/1:30,1:29:37.89:38,0,1178	0/0:15,0:15:27.09:0,27,504	1/1:5,1:5:8.89:104,9,0
chr10	101874213	.	A	ATT	495.96	PASS	AB=0.981;AC=18;AF=0.333;AN=54;BaseQRankSum=6.194;DP=679;FS=63.917;HRun=0;HaplotypeScore=204.7152;InbreedingCoeff=-0.0001;MQ=30.62;MQ0=3;MQRankSum=-4.591;QD=1.07;ReadPosRankSum=2.925;VQSLOD=0.8127;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:9.73:0,10,87	0/0:14,0:14:3.87:0,4,14	./.	0/0:2,0:2:2.99:0,3,23	0/1:42,0:41:0.30:0,0,1	1/1:20,0:19:0.56:26,1,0	0/1:12,1:13:35.80:36,0,185	0/0:35,0:32:50.89:0,51,526	0/0:24,0:24:9.22:0,9,138	0/1:63,3:65:99:222,0,698	1/1:24,0:24:18.96:72,19,0	0/0:19,0:19:7.85:0,8,56	0/0:24,0:24:18.39:0,18,197	0/1:18,0:17:16.51:17,0,101	0/0:28,0:27:2.86:0,3,61	0/1:27,0:26:8.51:9,0,36	0/1:18,0:18:1.46:1,0,124	0/0:4,0:4:12:0,12,109	0/1:28,0:27:14.76:15,0,255	0/1:34,2:36:19.66:20,0,143	0/0:13,0:13:12:0,12,148	1/1:32,0:32:15.82:81,16,0	0/1:25,1:26:1.08:7,0,1	0/0:19,0:19:15.05:0,15,241	0/1:37,0:37:9.40:9,0,56	0/1:51,1:51:95.52:96,0,586	0/1:23,0:23:37.85:38,0,182	0/0:13,0:13:10.47:0,10,76
chr10	101875177	.	GT	G	13417.01	PASS	AB=0.750;AC=53;AF=0.946;AN=56;BaseQRankSum=3.078;DP=381;FS=0.000;HRun=1;HaplotypeScore=313.5136;InbreedingCoeff=0.2824;MQ=40.86;MQ0=0;MQRankSum=-1.948;QD=35.40;ReadPosRankSum=2.862;VQSLOD=3.6341;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:36.03:458,36,0	1/1:0,4:4:12.04:167,12,0	0/1:2,1:3:28.07:28,0,65	0/0:1,1:2:1.55:0,2,4	1/1:0,24:24:45.15:627,45,0	1/1:0,11:11:33.11:460,33,0	1/1:0,8:8:21.07:293,21,0	1/1:0,14:14:39.13:544,39,0	1/1:0,6:6:18.06:251,18,0	1/1:0,21:21:63.21:872,63,0	1/1:0,27:27:66.22:917,66,0	1/1:0,18:18:54.13:729,54,0	1/1:0,20:20:57.10:747,57,0	1/1:0,14:14:36.05:477,36,0	1/1:0,11:11:33.11:460,33,0	1/1:0,12:11:33.11:460,33,0	1/1:0,9:9:17.04:249,17,0	1/1:0,4:4:12.04:167,12,0	1/1:0,10:10:30.04:381,30,0	1/1:0,25:25:57.14:771,57,0	1/1:0,4:4:9.03:126,9,0	1/1:0,27:27:66.22:919,66,0	1/1:1,27:28:69.23:957,69,0	1/1:0,7:7:6.02:84,6,0	1/1:0,21:21:60.20:833,60,0	1/1:0,17:17:51.13:690,51,0	1/1:0,17:17:48.16:669,48,0	1/1:0,2:2:6.02:84,6,0
chr10	101875186	.	TC	T	12672.03	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.364;DP=376;FS=0.000;HRun=1;HaplotypeScore=333.0108;InbreedingCoeff=0.6182;MQ=34.24;MQ0=0;MQRankSum=-2.442;QD=33.88;ReadPosRankSum=1.445;VQSLOD=3.4600;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:36.08:475,36,0	1/1:0,4:4:9.03:126,9,0	0/0:1,0:1:3.01:0,3,30	0/0:1,0:1:3.01:0,3,48	1/1:0,21:21:39.04:500,39,0	1/1:0,13:13:36.12:490,36,0	1/1:0,9:9:21.07:275,21,0	1/1:0,10:10:27.09:377,27,0	1/1:0,9:9:27.09:367,27,0	1/1:0,21:21:60.20:838,60,0	1/1:0,26:26:66.05:833,66,0	1/1:0,18:18:54.18:754,54,0	1/1:0,19:19:54.18:748,54,0	1/1:0,13:13:36.12:497,36,0	1/1:0,12:12:33.11:455,33,0	1/1:0,14:13:36.12:490,36,0	1/1:0,9:9:21.07:288,21,0	1/1:0,4:4:12.04:168,12,0	1/1:1,10:11:33.11:446,33,0	1/1:0,23:23:54.05:688,54,0	1/1:0,3:3:6.02:84,6,0	1/1:0,26:26:54.18:746,54,0	1/1:0,26:26:57.02:708,57,0	1/1:0,6:6:6.02:84,6,0	1/1:0,23:23:54.17:737,54,0	1/1:0,20:20:60.20:832,60,0	1/1:0,18:18:42.14:582,42,0	1/1:0,2:2:6.02:84,6,0
chr10	101875200	.	CA	C	6665.50	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=1.721;DP=337;FS=3.745;HRun=1;HaplotypeScore=359.4011;InbreedingCoeff=0.5394;MQ=34.79;MQ0=0;MQRankSum=-1.732;QD=19.90;ReadPosRankSum=1.589;VQSLOD=3.5496;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:35.69:253,36,0	1/1:0,3:3:8.93:65,9,0	./.	0/0:2,0:2:3.01:0,3,48	1/1:0,20:20:38.58:271,39,0	1/1:0,14:14:35.76:263,36,0	1/1:0,8:8:23.66:161,24,0	1/1:0,16:16:47.53:347,48,0	1/1:0,13:13:38.64:273,39,0	1/1:0,17:17:50.62:388,51,0	1/1:0,20:20:53.50:379,53,0	1/1:0,15:15:44.77:337,45,0	1/1:0,18:18:53.34:371,53,0	1/1:0,10:10:29.76:212,30,0	1/1:0,12:12:35.41:247,35,0	1/1:0,14:13:38.55:266,39,0	1/1:0,7:7:20.85:153,21,0	1/1:0,4:4:11.92:90,12,0	1/1:0,10:10:29.67:220,30,0	1/1:0,19:19:56.56:420,57,0	1/1:0,3:3:5.93:40,6,0	1/1:0,19:19:56.50:399,57,0	1/1:0,19:19:44.50:310,44,0	1/1:0,4:4:8.62:52,9,0	1/1:0,22:22:65.10:462,65,0	1/1:0,18:18:53.28:376,53,0	1/1:0,14:14:38.58:264,39,0	1/1:0,2:2:5.98:47,6,0
chr10	101875202	.	GC	G	5413.43	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=1.721;DP=337;FS=3.661;HRun=1;HaplotypeScore=364.0384;InbreedingCoeff=0.5092;MQ=34.79;MQ0=0;MQRankSum=-1.732;QD=16.16;ReadPosRankSum=1.622;VQSLOD=3.6380;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:32.67:193,33,0	1/1:0,3:3:8.79:53,9,0	./.	0/0:1,1:2:2.99:0,3,23	1/1:0,20:20:35.23:193,35,0	1/1:0,14:14:35.34:219,35,0	1/1:0,8:8:23.10:129,23,0	1/1:0,16:16:47.17:314,47,0	1/1:0,13:13:38.09:227,38,0	1/1:0,17:17:50.20:349,50,0	1/1:0,20:20:49.93:282,50,0	1/1:0,15:15:44.20:278,44,0	1/1:0,18:18:51.93:298,52,0	1/1:0,10:10:29.20:173,29,0	1/1:0,12:12:34.55:199,35,0	1/1:0,14:13:37.82:215,38,0	1/1:0,7:7:20.54:126,21,0	1/1:0,4:4:11.89:82,12,0	1/1:0,10:10:29.37:192,29,0	1/1:0,19:19:53.73:326,54,0	1/1:0,3:3:3.43:20,3,0	1/1:0,19:19:55.37:321,55,0	1/1:0,19:19:40.98:226,41,0	1/1:0,4:4:8.02:39,8,0	1/1:0,22:22:63.65:371,64,0	1/1:0,18:18:52.31:326,52,0	1/1:0,14:14:37.82:217,38,0	1/1:0,2:2:5.95:43,6,0
chr10	101875207	.	GC	G	12943.89	PASS	AC=52;AF=1.000;AN=52;DP=369;FS=0.000;HRun=1;HaplotypeScore=377.8834;InbreedingCoeff=-0.0177;MQ=36.76;MQ0=0;QD=35.37;VQSLOD=2.7429;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:36.12:465,36,0	1/1:0,3:3:6.02:80,6,0	./.	./.	1/1:0,24:24:54.17:669,54,0	1/1:0,16:16:48.15:618,48,0	1/1:0,9:9:27.09:351,27,0	1/1:0,18:18:54.18:725,54,0	1/1:0,13:13:36.12:474,36,0	1/1:0,17:17:51.17:688,51,0	1/1:0,21:21:57.18:724,57,0	1/1:0,17:17:48.15:617,48,0	1/1:0,19:19:57.18:734,57,0	1/1:0,12:12:36.12:462,36,0	1/1:0,16:16:48.10:602,48,0	1/1:0,15:14:42.14:550,42,0	1/1:0,8:8:21.07:275,21,0	1/1:0,4:4:9.03:120,9,0	1/1:0,12:12:36.11:474,36,0	1/1:0,21:21:57.18:732,57,0	1/1:0,3:3:3.01:38,3,0	1/1:0,20:20:51.17:663,51,0	1/1:0,19:19:42.14:540,42,0	1/1:0,5:5:11.95:133,12,0	1/1:0,24:24:63.20:819,63,0	1/1:0,19:19:57.19:755,57,0	1/1:0,15:15:43.95:554,44,0	1/1:0,2:2:6.02:80,6,0
chr10	101875557	.	AACAC	A	851.53	PASS	AB=0.816;AC=11;AF=0.196;AN=56;BaseQRankSum=5.247;DP=540;FS=6.714;HRun=0;HaplotypeScore=95.6891;InbreedingCoeff=0.5089;MQ=59.02;MQ0=12;MQRankSum=-2.032;QD=7.81;ReadPosRankSum=1.689;VQSLOD=1.8914;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:30:33.07:0,33,532	1/1:5,0:7:8.99:96,9,0	0/0:25,0:13:0.47:0,0,1	0/0:25,0:12:6:0,6,67	1/1:8,6:17:6.33:95,6,0	0/0:9,0:15:21.05:0,21,384	0/0:29,0:30:38.82:0,39,698	0/0:15,0:14:16.86:0,17,314	0/0:13,0:13:21.05:0,21,425	0/0:14,0:14:18.51:0,19,319	0/0:12,0:13:8.77:0,9,155	1/1:12,3:16:8.77:122,9,0	1/1:9,4:15:24.06:314,24,0	0/0:14,1:14:15.05:0,15,356	0/0:20,0:22:26.83:0,27,577	0/1:11,8:20:10.32:332,0,10	0/1:14,2:18:23.70:24,0,264	0/0:24,1:30:3.37:0,3,846	0/0:17,0:17:11.96:0,12,231	0/0:9,0:8:9.03:0,9,212	0/0:41,1:43:15.35:0,15,928	0/0:17,0:15:30.07:0,30,538	0/0:14,0:13:6.02:0,6,126	0/0:30,0:31:50.63:0,51,1011	0/0:20,0:21:29.84:0,30,641	0/0:20,0:19:12.93:0,13,276	0/1:15,1:16:26.22:26,0,329	0/0:11,0:10:15.03:0,15,297
chr10	101876785	.	TA	T	459.83	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=2.926;DP=546;FS=0.000;HRun=8;HaplotypeScore=64.9016;InbreedingCoeff=0.2774;MQ=77.45;MQ0=1;MQRankSum=-0.939;QD=6.48;ReadPosRankSum=-1.161;VQSLOD=0.0568;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.10:0,72,836	0/1:14,0:14:40.32:40,0,69	0/0:15,0:10:10.74:0,11,102	0/0:14,0:15:2.88:0,3,81	0/0:17,0:17:29.30:0,29,115	0/0:19,0:19:54.17:0,54,652	0/0:10,0:10:30.08:0,30,350	0/0:29,0:29:84.24:0,84,995	0/0:17,0:17:42.10:0,42,484	0/0:27,0:27:72.22:0,72,870	0/0:17,0:17:51.12:0,51,591	0/0:20,0:20:38.53:0,39,177	0/1:14,0:14:22.17:22,0,66	0/0:7,0:7:21.05:0,21,244	0/0:27,0:27:72.19:0,72,845	0/1:26,0:26:65.37:65,0,136	0/0:22,0:22:66.16:0,66,766	1/1:0,17:17:48.04:455,48,0	0/0:23,0:23:60.12:0,60,657	0/0:35,0:35:90.23:0,90,1044	0/0:8,0:8:24.07:0,24,290	0/0:18,0:18:51.14:0,51,604	0/0:29,0:29:75.22:0,75,895	0/0:18,0:17:48.10:0,48,543	0/0:33,0:33:90.24:0,90,1045	0/0:2,0:17:39.70:0,40,217	0/0:23,0:23:69.19:0,69,809	0/0:2,0:3:2.88:0,3,15
chr10	101881102	.	C	CTA	6220.88	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-9.799;DP=629;FS=2.213;HRun=0;HaplotypeScore=72.6794;InbreedingCoeff=0.9995;MQ=83.01;MQ0=1;MQRankSum=-2.014;QD=46.42;ReadPosRankSum=3.971;VQSLOD=6.4946;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:45.15:0,45,618	1/1:0,16:16:48.16:851,48,0	0/0:20,0:20:44.80:0,45,607	0/0:18,0:18:44.51:0,45,566	1/1:0,29:30:78.27:1380,78,0	0/0:26,0:26:72.23:0,72,972	0/0:12,0:12:30.10:0,30,411	0/0:38,0:38:87.29:0,87,1195	0/0:18,0:18:51.14:0,51,666	0/0:32,0:32:90.29:0,90,1224	0/0:24,0:24:72.24:0,72,989	1/1:1,35:35:99:1756,99,0	1/1:0,17:17:42.14:745,42,0	0/0:18,0:18:51.15:0,51,683	0/0:23,0:23:69.21:0,69,917	1/1:1,22:23:57.20:1011,57,0	0/0:23,0:23:54.15:0,54,722	1/1:0,12:12:27.09:478,27,0	0/0:20,0:20:57.19:0,57,783	0/0:31,0:31:93.30:0,93,1261	0/0:21,0:21:54.18:0,54,741	0/0:20,0:20:54.17:0,54,727	0/0:23,0:23:60.20:0,60,824	0/0:12,0:12:30.10:0,30,412	0/0:25,0:25:69.20:0,69,915	0/0:38,0:38:99:0,99,1360	0/0:27,0:27:81.23:0,81,1076	0/0:11,0:11:30.10:0,30,411
chr10	101881340	.	GA	G	4405.12	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=16.866;DP=573;FS=0.744;HRun=6;HaplotypeScore=81.1748;InbreedingCoeff=0.9973;MQ=83.24;MQ0=0;MQRankSum=-5.171;QD=28.60;ReadPosRankSum=3.080;VQSLOD=5.4634;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:16:36.09:386,36,0	1/1:1,12:13:36.09:383,36,0	0/0:19,0:19:38.22:0,38,456	0/0:16,0:16:45.12:0,45,564	1/1:2,19:21:54.11:569,54,0	0/0:18,0:18:51.17:0,51,671	0/0:20,0:20:57.17:0,57,733	0/0:18,0:18:45.14:0,45,580	0/0:27,0:27:81.25:0,81,1039	0/0:21,0:21:57.18:0,57,739	0/0:25,0:25:72.22:0,72,933	1/1:5,17:22:60.11:631,60,0	1/1:2,22:24:63.16:674,63,0	0/0:15,0:15:39.13:0,39,513	0/0:23,0:23:63.20:0,63,829	1/1:0,18:18:54.14:579,54,0	0/0:26,0:26:72.21:0,72,918	1/1:1,10:11:30.08:322,30,0	0/0:20,0:20:60.19:0,60,776	0/0:45,0:45:99:0,123,1605	0/0:12,0:12:36.12:0,36,474	0/0:21,0:21:63.17:0,63,799	0/0:29,0:29:75.22:0,75,954	0/0:16,0:16:45.15:0,45,592	0/0:22,0:22:63.20:0,63,828	1/1:1,23:24:32.70:702,33,0	0/0:26,0:26:75.23:0,75,972	1/1:0,5:5:15.04:159,15,0
chr10	101881394	.	C	CAAAAAATGAGAGGG	18218.72	PASS	AB=0.872;AC=17;AF=0.304;AN=56;BaseQRankSum=5.016;DP=595;FS=3.542;HRun=0;HaplotypeScore=232.8322;InbreedingCoeff=0.7770;MQ=65.52;MQ0=1;MQRankSum=-16.396;QD=92.48;ReadPosRankSum=0.103;VQSLOD=4.7226;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,5:25:66.20:2667,66,0	1/1:2,4:10:24.07:942,24,0	0/1:13,0:12:1.02:1,0,536	0/0:11,0:11:22.43:0,22,486	1/1:10,13:32:69.21:2895,69,0	0/0:24,0:24:66.21:0,66,2128	0/0:26,0:26:63.17:0,63,1853	0/0:23,0:23:60.20:0,60,1462	0/0:29,0:29:81.26:0,81,2806	0/0:26,0:26:69.23:0,69,2138	0/0:25,0:25:68.79:0,69,2010	1/1:8,12:26:59.28:2820,59,0	1/1:8,5:23:66.20:2634,66,0	0/0:17,0:17:48.16:0,48,1634	0/0:21,0:21:63.20:0,63,2033	1/1:10,5:25:69.20:2479,69,0	0/0:16,0:16:45.15:0,45,1341	0/1:10,2:13:30.59:730,0,31	0/0:26,0:26:69.22:0,69,1620	0/0:38,0:38:99:0,102,3364	0/0:14,0:14:39.11:0,39,1205	0/0:17,0:17:45.15:0,45,1562	0/0:17,0:17:48.16:0,48,1428	0/0:16,0:16:45.14:0,45,1393	0/0:21,0:21:60.18:0,60,2012	0/1:7,8:23:56.49:2722,0,56	0/0:31,0:31:87.30:0,87,3132	1/1:0,1:6:15.04:327,15,0
chr10	101881967	.	AGTGT	A	425.09	PASS	AB=0.913;AC=10;AF=0.200;AN=50;BaseQRankSum=3.514;DP=611;FS=3.971;HRun=0;HaplotypeScore=126.7160;InbreedingCoeff=0.5122;MQ=60.02;MQ0=24;MQRankSum=-3.170;QD=3.70;ReadPosRankSum=-1.159;VQSLOD=2.1455;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:37:24.82:170,25,0	./.	./.	./.	1/1:14,0:14:5.99:69,6,0	0/0:21,0:20:14.83:0,15,218	0/0:21,0:21:15.31:0,15,236	0/0:28,0:27:6.49:0,6,106	0/0:16,0:17:24.29:0,24,423	0/0:29,0:28:21.07:0,21,419	0/0:24,0:24:23.82:0,24,439	0/1:18,1:17:13.16:40,0,13	0/0:12,0:13:2.72:0,3,12	0/0:13,0:13:11.76:0,12,151	0/0:17,0:16:14.79:0,15,279	0/0:9,0:11:11.18:0,11,106	0/0:28,0:28:59.46:0,59,1064	1/1:18,0:18:0.89:2,1,0	0/0:17,0:16:3.01:0,3,70	0/0:13,0:13:9.02:0,9,139	0/0:55,0:50:39.05:0,39,638	0/0:17,0:18:20.51:0,21,222	0/0:17,0:16:15.03:0,15,263	0/0:38,0:39:63.18:0,63,1134	0/0:8,0:9:9.02:0,9,131	0/1:18,3:20:23.70:144,0,24	0/0:12,0:12:12.04:0,12,282	1/1:2,3:5:9.03:137,9,0
chr10	101882865	.	TCAAA	T	2777.43	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.827;DP=685;FS=1.130;HRun=0;HaplotypeScore=110.9616;InbreedingCoeff=0.9996;MQ=79.83;MQ0=0;MQRankSum=-1.665;QD=47.89;ReadPosRankSum=3.198;VQSLOD=4.3292;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,3415	0/0:12,0:12:36.12:0,36,978	0/0:15,0:15:39.11:0,39,945	0/0:18,0:18:48.16:0,48,1123	0/0:28,0:28:84.27:0,84,2243	0/0:21,0:21:63.20:0,63,1669	0/0:26,0:26:75.26:0,75,2038	0/0:35,0:35:99:0,105,2757	0/0:22,0:22:66.23:0,66,1808	0/0:33,0:33:90.30:0,90,2408	0/0:23,0:23:69.24:0,69,1865	0/0:33,0:33:99:0,99,2673	0/0:31,0:31:93.31:0,93,2457	0/0:20,0:20:60.21:0,60,1644	0/0:30,0:30:87.29:0,87,2298	0/0:22,0:22:63.21:0,63,1670	0/0:21,0:21:63.22:0,63,1685	1/1:1,17:18:42.14:814,42,0	0/0:17,0:17:51.18:0,51,1377	0/0:29,0:29:87.29:0,87,2325	0/0:35,0:34:99:0,105,2726	0/0:22,0:22:66.23:0,66,1808	0/0:21,0:21:63.22:0,63,1653	0/0:18,0:18:54.19:0,54,1477	0/0:23,0:23:66.22:0,66,1716	1/1:1,28:29:84.27:1583,84,0	0/0:29,0:28:87.30:0,87,2383	1/1:1,10:11:27.09:523,27,0
chr10	101883214	.	AT	A	2731.08	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.076;DP=685;FS=1.722;HRun=9;HaplotypeScore=71.0863;InbreedingCoeff=0.9983;MQ=74.30;MQ0=0;MQRankSum=-0.333;QD=21.34;ReadPosRankSum=3.592;VQSLOD=4.4725;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.17:0,66,742	1/1:1,12:13:33.02:302,33,0	0/0:11,0:10:27.07:0,27,297	0/0:19,0:19:19.63:0,20,264	1/1:6,23:29:62.94:567,63,0	0/0:26,0:26:75.20:0,75,849	0/0:27,0:28:75.06:0,75,845	0/0:38,0:38:99:0,99,1111	0/0:25,0:25:60.17:0,60,684	0/0:28,0:28:72.21:0,72,827	0/0:26,0:26:66.20:0,66,762	1/1:1,29:31:74.08:665,74,0	1/1:0,30:30:87.05:796,87,0	0/0:26,0:26:72.20:0,72,822	0/0:28,0:28:75.22:0,75,858	1/1:3,22:25:63.03:577,63,0	0/0:27,0:27:72.16:0,72,806	0/0:20,0:21:56.96:0,57,615	0/0:15,0:15:36.08:0,36,395	0/0:25,0:25:75.22:0,75,866	0/0:18,0:19:57.02:0,57,629	0/0:23,0:23:57.17:0,57,658	0/0:23,1:24:41.71:0,42,714	0/0:29,0:29:75.19:0,75,837	0/0:25,0:25:72.21:0,72,823	0/0:4,0:27:65.73:0,66,352	0/0:23,0:24:66.03:0,66,740	0/0:3,0:18:42.92:0,43,236
chr10	101884045	.	TG	T	4325.05	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.173;DP=542;FS=1.254;HRun=2;HaplotypeScore=74.2337;InbreedingCoeff=0.9809;MQ=90.55;MQ0=0;MQRankSum=-6.158;QD=36.97;ReadPosRankSum=1.994;VQSLOD=5.5607;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.31:0,96,1416	1/1:0,6:6:18.06:233,18,0	0/0:22,0:22:58.73:0,59,824	0/0:24,0:24:66.80:0,67,933	1/1:0,21:21:63.03:773,63,0	0/0:21,0:21:63.19:0,63,922	0/0:26,0:26:75.20:0,75,1035	0/0:25,0:25:72.24:0,72,1076	0/0:27,0:27:78.25:0,78,1145	0/0:20,0:20:60.17:0,60,858	0/0:16,0:16:45.15:0,45,674	1/1:0,19:19:57.19:738,57,0	1/1:3,19:22:60.19:764,60,0	0/0:18,0:18:54.18:0,54,806	0/0:27,0:27:81.26:0,81,1192	1/1:3,16:19:57.18:728,57,0	0/0:26,0:26:78.26:0,78,1167	1/1:1,11:12:33.11:428,33,0	0/0:14,0:14:42.14:0,42,628	0/0:15,0:15:45.15:0,45,674	0/0:17,0:17:42.12:0,42,591	0/0:15,0:15:42.13:0,42,601	0/0:14,0:14:36.12:0,36,537	0/0:16,0:16:48.16:0,48,716	0/0:27,0:27:78.26:0,78,1164	1/1:1,15:16:45.15:584,45,0	0/0:23,0:23:60.19:0,60,875	1/1:0,2:2:6.02:78,6,0
chr10	101884073	.	TA	T	924.17	PASS	AB=0.879;AC=13;AF=0.232;AN=56;BaseQRankSum=12.763;DP=470;FS=3.665;HRun=1;HaplotypeScore=82.1436;InbreedingCoeff=0.6480;MQ=92.90;MQ0=0;MQRankSum=-7.392;QD=8.72;ReadPosRankSum=1.657;VQSLOD=1.2650;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:71.90:0,72,960	1/1:6,0:6:6.86:33,7,0	0/0:22,0:22:44.81:0,45,753	0/0:27,0:27:70.84:0,71,1014	0/1:14,1:15:21.06:103,0,21	0/0:13,0:13:39.13:0,39,568	0/0:26,0:26:74.99:0,75,903	0/0:17,0:17:36.10:0,36,552	0/0:20,0:20:57.13:0,57,813	0/0:19,0:19:54.01:0,54,782	0/0:15,0:15:45.14:0,45,664	1/1:15,4:19:45.43:300,45,0	1/1:17,3:20:4.46:187,4,0	0/0:15,0:15:42.10:0,42,569	0/0:24,0:24:72.20:0,72,1024	1/1:10,3:13:5.17:173,5,0	0/0:27,0:27:81.26:0,81,1210	0/1:10,4:14:8.48:179,0,8	0/0:14,0:14:39.09:0,39,542	0/0:11,0:11:30.09:0,30,454	0/0:13,0:13:29.95:0,30,438	0/0:8,0:8:24.07:0,24,347	0/0:12,0:12:36.12:0,36,568	0/0:18,0:18:54.06:0,54,750	0/0:15,0:15:45.15:0,45,688	0/1:11,1:12:8.52:43,0,9	0/0:20,0:20:59.97:0,60,874	1/1:7,0:7:18.31:75,18,0
chr10	101884074	.	AC	A	2351.86	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.559;DP=473;FS=1.481;HRun=6;HaplotypeScore=80.2719;InbreedingCoeff=0.9904;MQ=91.96;MQ0=0;MQRankSum=-8.327;QD=21.58;ReadPosRankSum=0.147;VQSLOD=2.7814;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:28:30.93:0,31,722	1/1:1,5:6:14.97:137,15,0	0/0:21,0:21:46.81:0,47,606	0/0:26,0:27:68.14:0,68,809	1/1:12,3:15:30.02:298,30,0	0/0:13,0:13:39.08:0,39,494	0/0:26,0:26:66.20:0,66,846	0/0:19,0:19:39.09:0,39,467	0/0:19,0:19:54.17:0,54,696	0/0:19,0:19:51.12:0,51,643	0/0:15,0:15:42.13:0,42,542	1/1:10,10:20:54.08:536,54,0	1/1:9,12:21:44.92:423,45,0	0/0:16,0:16:45.14:0,45,576	0/0:24,0:24:69.22:0,69,900	1/1:7,7:14:12.20:303,12,0	0/0:27,0:27:81.26:0,81,1062	1/1:6,7:13:33.03:329,33,0	0/0:13,0:13:36.12:0,36,472	0/0:10,0:10:30.10:0,30,394	0/0:12,0:12:29.96:0,30,394	0/0:7,0:7:21.07:0,21,275	0/0:13,0:13:36.12:0,36,472	0/0:18,0:18:48.16:0,48,630	0/0:17,0:17:51.13:0,51,638	1/1:6,7:13:32.92:309,33,0	0/0:20,0:20:60.19:0,60,784	1/1:0,7:7:21.05:222,21,0
chr10	101884080	.	CA	C	2337.92	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.957;DP=483;FS=5.314;HRun=1;HaplotypeScore=78.5870;InbreedingCoeff=0.9628;MQ=91.20;MQ0=0;MQRankSum=-5.867;QD=21.65;ReadPosRankSum=-1.045;VQSLOD=3.3156;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:54.43:0,54,640	1/1:6,0:6:14.97:137,15,0	0/0:19,0:19:39.03:0,39,570	0/0:29,0:29:36.95:0,37,706	1/1:6,6:12:32.24:306,32,0	0/0:14,0:14:12.64:0,13,427	0/0:23,0:23:52.96:0,53,639	0/0:21,0:21:4.73:0,5,403	0/0:19,0:19:56.06:0,56,634	0/0:19,0:19:54.06:0,54,642	0/0:16,0:16:41.62:0,42,509	1/1:20,0:20:49.30:514,49,0	1/1:21,0:21:41.09:418,41,0	0/0:18,0:18:30:0,30,507	0/0:23,0:23:69.09:0,69,821	1/1:15,0:15:14.94:323,15,0	0/0:28,0:28:84.03:0,84,979	1/1:13,0:13:33.03:329,33,0	0/0:15,0:15:41.96:0,42,473	0/0:11,0:11:30.10:0,30,397	0/0:14,0:14:12.98:0,13,377	0/0:8,0:8:24.01:0,24,247	0/0:15,0:15:42.03:0,42,488	0/0:18,0:18:54.03:0,54,606	0/0:20,0:20:50.02:0,50,594	1/1:14,0:14:30.02:294,30,0	0/0:20,0:20:59.87:0,60,698	1/1:7,0:7:21.05:222,21,0
chr10	101885125	.	C	CT	162.84	PASS	AB=0.972;AC=17;AF=0.304;AN=56;BaseQRankSum=6.363;DP=912;FS=8.691;HRun=0;HaplotypeScore=561.8842;InbreedingCoeff=-0.3033;MQ=34.48;MQ0=3;MQRankSum=-3.343;QD=0.29;ReadPosRankSum=-4.686;VQSLOD=-0.7083;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:36:0.80:1,0,82	0/1:17,0:17:9.87:10,0,13	0/0:7,0:4:3.85:0,4,12	0/0:10,0:4:12.04:0,12,161	1/1:37,0:37:1.45:39,1,0	0/1:14,1:15:19.02:21,0,19	0/1:36,2:38:21.86:22,0,69	0/1:46,0:46:11.93:12,0,677	0/1:32,2:31:16.58:19,0,17	0/0:57,1:58:11.32:0,11,815	0/0:26,0:25:4.63:0,5,19	0/1:50,2:51:2.96:3,0,107	0/0:36,0:36:8.68:0,9,225	0/1:50,2:52:17.03:17,0,144	0/0:51,3:54:3.84:0,4,88	0/0:44,2:46:5.24:0,5,150	0/0:20,0:20:14.34:0,14,177	0/0:15,0:15:10.28:0,10,202	0/1:22,2:19:23.63:24,0,321	0/1:39,1:39:23.11:23,0,53	0/0:33,0:33:17.18:0,17,136	0/1:36,1:37:37.20:37,0,62	0/1:32,0:32:6.71:36,0,7	0/1:36,1:37:5.99:6,0,19	0/1:31,1:32:12.16:12,0,59	0/0:49,0:48:21.94:0,22,522	0/1:22,0:22:25.82:26,0,102	0/0:4,0:4:2.97:0,3,20
chr10	101885367	.	AAC	A	276.43	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.224;DP=1094;FS=10.714;HRun=0;HaplotypeScore=187.4740;InbreedingCoeff=0.9986;MQ=63.03;MQ0=11;MQRankSum=-0.864;QD=5.03;ReadPosRankSum=1.474;VQSLOD=1.8402;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,123,2110	0/0:12,0:12:30.10:0,30,507	0/0:64,0:39:76.46:0,76,1143	0/0:64,0:38:44.71:0,45,885	0/0:29,0:29:54.16:0,54,931	0/0:27,0:27:78.25:0,78,1331	0/0:37,0:37:96.31:0,96,1615	0/0:51,0:51:99:0,132,2272	0/0:31,2:33:49.37:0,49,1302	0/0:49,0:49:99:0,135,2286	0/0:17,0:17:42.13:0,42,691	0/0:42,0:42:99:0,102,1743	0/0:39,0:39:99:0,108,1826	0/0:48,0:48:99:0,126,2161	0/0:53,0:53:99:0,141,2372	0/0:41,0:41:99:0,114,1925	0/0:36,0:36:93.75:0,94,1553	0/0:42,2:44:80.39:0,80,1879	0/0:31,0:31:66.23:0,66,1145	0/0:26,0:26:57.19:0,57,968	0/0:91,1:92:99:0,244,4065	0/0:38,0:38:69.23:0,69,1188	0/0:29,0:29:63.22:0,63,1072	0/0:42,0:42:99:0,111,1899	0/0:28,0:28:71.61:0,72,1196	1/1:43,0:42:39.61:298,40,0	0/0:20,0:20:57.18:0,57,969	1/1:12,0:12:24.10:100,24,0
chr10	101885372	.	ACACT	A	2273.67	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.709;DP=1084;FS=14.554;HRun=0;HaplotypeScore=216.0388;InbreedingCoeff=0.9982;MQ=62.89;MQ0=12;MQRankSum=-1.228;QD=41.34;ReadPosRankSum=-0.121;VQSLOD=2.6274;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,112,3140	0/0:11,0:11:29.93:0,30,730	0/0:64,0:39:41.36:0,41,1391	0/0:61,0:38:22.95:0,23,1205	0/0:28,0:28:57.01:0,57,1360	0/0:30,0:30:84.26:0,84,2098	0/0:37,0:36:99:0,102,2394	0/0:53,0:53:99:0,153,3409	0/0:32,0:32:52.14:0,52,1927	0/0:49,0:49:99:0,138,3456	0/0:18,0:18:42.61:0,43,1071	0/0:42,0:42:99:0,108,2717	0/0:37,0:37:99:0,105,2647	0/0:45,0:45:99:0,129,3189	0/0:55,0:55:99:0,150,3624	0/0:44,0:44:99:0,120,3078	0/0:36,0:36:96.24:0,96,2323	0/0:40,0:40:82.91:0,83,2585	0/0:28,0:28:78.25:0,78,1821	0/0:26,0:26:57.18:0,57,1432	0/0:91,0:91:99:0,246,6035	0/0:37,0:37:72.19:0,72,1818	0/0:30,0:30:63.20:0,63,1565	0/0:41,0:41:99:0,117,2785	0/0:28,0:28:57.08:0,57,1718	1/1:18,25:42:83.99:1845,84,0	0/0:21,0:21:60.21:0,60,1550	1/1:1,11:12:33.02:550,33,0
chr10	101885627	.	G	GT	1565.59	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.926;DP=726;FS=4.355;HRun=7;HaplotypeScore=77.4847;InbreedingCoeff=0.9980;MQ=82.54;MQ0=0;MQRankSum=-1.213;QD=28.99;ReadPosRankSum=2.017;VQSLOD=4.3767;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.08:0,93,874	0/0:10,0:10:30.05:0,30,290	0/0:20,0:20:41.95:0,42,376	0/0:23,0:23:48.90:0,49,418	0/0:35,0:35:99:0,99,933	0/0:38,0:38:99:0,102,985	0/0:20,0:20:57.08:0,57,546	0/0:32,0:32:78.10:0,78,748	0/0:21,0:21:60.08:0,60,574	0/0:31,0:31:75.11:0,75,721	0/0:29,0:29:87.13:0,87,836	0/0:23,0:23:48.06:0,48,463	0/0:24,0:24:66.08:0,66,630	0/0:27,0:27:74.98:0,75,698	0/0:34,0:34:96.10:0,96,908	0/0:21,0:21:54.05:0,54,510	0/0:27,0:27:60.06:0,60,571	0/0:18,0:18:22.09:0,22,132	0/0:36,0:36:96.03:0,96,886	0/0:34,0:34:96.13:0,96,920	0/0:17,0:17:45.07:0,45,434	0/0:23,0:23:63.09:0,63,608	0/0:22,0:22:63.05:0,63,592	0/0:14,0:14:39.04:0,39,369	0/0:27,0:26:69.11:0,69,665	1/1:3,31:34:67.42:1093,67,0	0/0:32,0:32:90.11:0,90,858	1/1:3,16:20:51.02:594,51,0
chr10	101886302	.	G	GCA	4378.85	PASS	AB=0.554;AC=17;AF=0.304;AN=56;BaseQRankSum=4.527;DP=639;FS=24.698;HRun=0;HaplotypeScore=94.2772;InbreedingCoeff=0.8971;MQ=60.74;MQ0=7;MQRankSum=-0.208;QD=28.62;ReadPosRankSum=2.271;VQSLOD=3.5237;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,25:31:7.09:612,0,7	1/1:1,3:4:9.01:125,9,0	0/0:20,0:12:5.42:0,5,186	0/0:18,0:13:15.78:0,16,228	1/1:7,12:20:21.07:354,21,0	0/0:11,0:11:30.07:0,30,357	0/0:14,0:14:33.07:0,33,383	0/0:33,0:33:68.83:0,69,777	0/0:36,0:36:84.13:0,84,1016	0/0:32,0:32:81.15:0,81,966	0/0:28,0:28:78.21:0,78,961	1/1:4,11:14:30.10:488,30,0	1/1:2,14:16:33.11:556,33,0	0/0:27,0:27:72.19:0,72,884	0/0:38,0:38:99:0,108,1326	1/1:3,14:17:30.10:505,30,0	0/0:19,0:19:36.10:0,36,448	1/1:3,11:13:30.10:505,30,0	0/0:13,0:13:24.07:0,24,297	0/0:38,0:38:99:0,102,1217	0/0:26,0:26:54.14:0,54,664	0/0:34,0:34:84.22:0,84,1025	0/0:25,0:25:60.15:0,60,743	0/0:17,0:17:42.10:0,42,511	0/0:27,0:27:72.19:0,72,884	1/1:7,16:23:57.15:929,57,0	0/0:30,0:30:84.16:0,84,978	1/1:3,10:10:18.06:304,18,0
chr10	101886370	.	C	CCACACA	833.17	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=8.401;DP=534;FS=6.063;HRun=0;HaplotypeScore=138.1190;InbreedingCoeff=0.7482;MQ=56.97;MQ0=2;MQRankSum=-5.372;QD=12.62;ReadPosRankSum=-1.033;VQSLOD=2.0541;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:50.72:0,51,1070	1/1:5,0:5:3.01:72,3,0	0/0:18,0:12:26.96:0,27,511	0/0:18,0:7:15.01:0,15,248	1/1:9,3:12:5.99:66,6,0	0/0:21,0:21:52.32:0,52,1263	0/0:15,0:15:45.14:0,45,901	0/0:40,0:39:93.25:0,93,1904	0/0:29,0:29:78.27:0,78,1671	0/0:33,0:33:87.28:0,87,1833	0/0:23,0:23:63.17:0,63,1245	1/1:6,1:7:2.99:24,3,0	1/1:6,1:7:6:85,6,0	0/0:21,0:21:48.12:0,48,1030	0/0:25,0:25:63.19:0,63,1347	1/1:5,1:6:3.01:52,3,0	0/0:23,0:23:54.09:0,54,1073	1/1:5,0:5:5.23:44,5,0	0/0:24,0:22:59.66:0,60,1134	0/0:27,0:27:69.22:0,69,1471	0/0:30,0:30:75.24:0,75,1646	0/0:16,0:16:42.14:0,42,940	0/0:20,0:20:60.19:0,60,1281	0/0:16,0:16:45.14:0,45,964	0/0:21,0:21:57.18:0,57,1214	1/1:18,0:18:41.43:494,41,0	0/0:23,0:23:60.18:0,60,1279	0/1:6,0:6:10.18:164,0,10
chr10	101886431	.	CCA	C	1595.63	PASS	AB=0.868;AC=27;AF=0.500;AN=54;BaseQRankSum=7.090;DP=653;FS=12.622;HRun=0;HaplotypeScore=97.0342;InbreedingCoeff=-0.2575;MQ=50.85;MQ0=35;MQRankSum=2.894;QD=3.63;ReadPosRankSum=0.457;VQSLOD=0.9100;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,11:38:6.11:369,0,6	1/1:1,3:4:8.76:100,9,0	./.	0/0:59,0:16:3.48:0,3,38	1/1:16,1:16:2.92:17,3,0	0/1:19,1:21:3.20:3,0,331	0/1:25,6:31:99:109,0,543	0/1:30,5:34:38.35:38,0,137	0/1:21,4:26:16.02:16,0,542	0/1:21,1:22:29.11:29,0,240	0/1:15,1:16:6.21:6,0,302	1/1:2,4:9:14.87:147,15,0	1/1:7,3:12:17.67:147,18,0	0/1:23,2:23:36.46:36,0,331	0/1:15,1:17:3.20:3,0,328	0/1:3,7:11:18.37:220,0,18	0/0:26,1:28:6.59:0,7,416	0/1:9,4:14:25.81:171,0,26	0/1:24,1:23:40.82:41,0,143	0/1:16,1:17:53.16:53,0,202	0/0:29,4:35:5.50:0,5,532	0/1:14,0:14:1.22:1,0,265	0/1:12,4:16:75.76:76,0,168	0/1:29,7:37:99:102,0,615	0/0:14,0:14:18.04:0,18,242	0/0:12,0:12:11.52:0,12,136	0/1:20,2:22:22.99:23,0,393	1/1:4,1:4:6.64:44,7,0
chr10	101886928	.	G	GGT	1439.06	PASS	AB=0.941;AC=5;AF=0.089;AN=56;BaseQRankSum=-8.062;DP=713;FS=3.211;HRun=0;HaplotypeScore=93.5784;InbreedingCoeff=0.7766;MQ=71.97;MQ0=0;MQRankSum=-0.409;QD=27.15;ReadPosRankSum=1.837;VQSLOD=5.1069;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,114,1424	0/0:6,0:6:18.06:0,18,229	0/1:15,0:14:14.97:15,0,156	0/0:16,0:14:14.68:0,15,203	0/0:30,0:30:84.27:0,84,1069	0/0:23,0:23:60.18:0,60,751	0/0:29,0:29:69.19:0,69,851	0/0:39,0:39:90.29:0,90,1146	0/0:27,0:27:75.24:0,75,955	0/0:25,0:25:60.15:0,60,746	0/0:25,0:25:51.15:0,51,637	0/0:36,0:36:93.29:0,93,1171	0/0:31,0:31:86.76:0,87,1079	0/0:29,0:29:72.22:0,72,903	0/0:29,0:29:78.25:0,78,993	0/0:20,0:20:42.13:0,42,534	0/0:36,0:36:99:0,99,1245	0/0:17,0:17:42.13:0,42,531	0/0:18,0:18:36.11:0,36,458	0/0:23,0:23:63.19:0,63,788	0/0:47,0:47:99:0,132,1666	0/0:11,0:11:27.08:0,27,331	0/0:18,0:18:54.17:0,54,686	0/0:32,0:32:93.28:0,93,1170	0/0:23,0:23:63.20:0,63,802	1/1:3,21:24:63.22:1051,63,0	0/0:24,0:24:66.21:0,66,840	1/1:1,12:13:30.10:502,30,0
chr10	101889645	.	GA	G	1688.21	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.810;DP=664;FS=7.281;HRun=8;HaplotypeScore=71.9879;InbreedingCoeff=0.9936;MQ=74.80;MQ0=0;MQRankSum=-1.159;QD=21.92;ReadPosRankSum=-1.479;VQSLOD=3.2979;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:28:71.15:672,71,0	0/0:9,0:9:24.07:0,24,288	0/0:16,0:16:24.07:0,24,280	0/0:11,0:11:17.16:0,17,250	0/0:34,0:34:87.26:0,87,1040	0/0:37,0:37:93.28:0,93,1121	0/0:26,0:26:66.20:0,66,797	0/0:27,0:26:60.18:0,60,714	0/0:21,0:21:60.18:0,60,724	0/0:36,0:36:93.27:0,93,1107	0/0:23,0:23:63.15:0,63,744	0/0:18,0:18:48.13:0,48,567	0/0:22,0:22:60.17:0,60,712	0/0:25,0:25:75.23:0,75,906	0/0:28,0:28:78.24:0,78,942	0/0:22,0:22:66.18:0,66,784	0/0:25,0:25:72.22:0,72,867	0/0:23,0:23:63.19:0,63,759	0/0:9,0:9:21.06:0,21,254	0/0:34,0:34:93.29:0,93,1122	0/0:15,0:15:39.12:0,39,471	0/0:18,0:18:48.15:0,48,579	0/0:22,0:22:57.16:0,57,678	0/0:24,0:24:63.15:0,63,745	0/0:29,0:29:84.26:0,84,1015	1/1:5,27:32:81.12:782,81,0	0/0:33,0:33:87.27:0,87,1051	1/1:1,16:17:39.06:376,39,0
chr10	101889879	.	TATAC	T	2881.42	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=7.110;DP=556;FS=3.145;HRun=0;HaplotypeScore=98.3709;InbreedingCoeff=0.9530;MQ=63.16;MQ0=4;MQRankSum=1.547;QD=24.01;ReadPosRankSum=4.514;VQSLOD=3.3582;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:60.13:0,60,1166	1/1:3,9:12:24.08:401,24,0	0/0:14,0:8:11:0,11,143	0/1:12,0:7:0:0,0,0	1/1:6,29:35:66.23:1105,66,0	0/0:23,0:23:50.92:0,51,1077	0/0:11,0:11:27.07:0,27,541	0/0:54,0:54:99:0,102,1851	0/0:15,0:15:27.07:0,27,566	0/0:25,0:25:72.23:0,72,1604	0/0:28,0:28:72.17:0,72,1479	1/1:4,11:15:21.07:352,21,0	1/1:2,16:18:30.02:503,30,0	0/0:17,0:17:45.12:0,45,981	0/0:12,0:12:30.08:0,30,664	1/1:4,8:12:15.05:252,15,0	0/0:14,0:14:33.10:0,33,764	1/1:6,10:16:27.09:453,27,0	0/0:16,0:14:42.12:0,42,949	0/0:27,0:27:72.21:0,72,1620	0/0:13,0:13:24.07:0,24,518	0/0:12,0:12:33.08:0,33,694	0/0:16,0:16:36.09:0,36,775	0/0:9,0:9:21.05:0,21,448	0/0:21,0:22:54.13:0,54,1119	0/0:35,0:35:87.24:0,87,1771	0/0:25,0:25:51.04:0,51,1046	0/0:15,0:14:39.54:0,40,798
chr10	101894421	.	GA	G	2310.06	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.501;DP=645;FS=3.012;HRun=1;HaplotypeScore=80.4379;InbreedingCoeff=0.9950;MQ=91.72;MQ0=0;MQRankSum=-4.241;QD=36.09;ReadPosRankSum=-0.259;VQSLOD=3.7709;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:75.14:1002,75,0	0/0:9,0:9:27.09:0,27,432	0/0:27,0:27:75.18:0,75,1094	0/0:26,0:26:72.13:0,72,1091	0/0:19,0:19:57.17:0,57,865	0/0:19,0:19:57.18:0,57,888	0/0:26,0:26:78.27:0,78,1242	0/0:33,0:32:96.31:0,96,1493	0/0:29,0:29:87.30:0,87,1391	0/0:27,0:27:81.28:0,81,1295	0/0:40,0:40:99:0,120,1895	0/0:22,0:22:66.23:0,66,1054	0/0:23,0:23:69.20:0,69,1055	0/0:16,0:16:48.16:0,48,765	0/0:23,0:23:69.22:0,69,1078	0/0:29,0:29:87.30:0,87,1389	0/0:23,0:23:69.24:0,69,1102	1/1:0,10:10:27.09:377,27,0	0/0:27,0:27:81.28:0,81,1289	0/0:26,0:26:78.25:0,78,1222	0/0:16,0:16:48.15:0,48,744	0/0:13,0:13:39.10:0,39,574	0/0:28,0:28:81.28:0,81,1292	0/0:23,0:23:60.19:0,60,931	0/0:22,0:22:66.21:0,66,1030	1/1:0,22:22:66.16:880,66,0	0/0:35,0:35:99:0,105,1654	1/1:0,5:5:15.05:210,15,0
chr10	101894788	.	CT	C	4622.64	PASS	AB=0.941;AC=19;AF=0.339;AN=56;BaseQRankSum=13.269;DP=678;FS=10.592;HRun=9;HaplotypeScore=70.6545;InbreedingCoeff=0.9122;MQ=78.48;MQ0=1;MQRankSum=-0.046;QD=20.55;ReadPosRankSum=3.197;VQSLOD=5.1441;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:35:93.04:851,93,0	1/1:1,9:10:27.01:247,27,0	0/1:30,2:24:11.79:12,0,393	0/0:28,0:25:29.56:0,30,349	1/1:4,23:27:66.03:604,66,0	0/0:30,0:30:84.25:0,84,969	0/0:26,0:26:69.21:0,69,796	0/0:37,0:37:93.12:0,93,1036	0/0:13,0:13:39.12:0,39,450	0/0:26,0:26:57.16:0,57,648	0/0:27,0:27:72.20:0,72,823	1/1:1,17:18:45.02:412,45,0	1/1:3,24:27:69.03:632,69,0	0/0:24,0:24:63.16:0,63,707	0/0:22,0:25:68.69:0,69,726	1/1:3,14:17:7.41:322,7,0	0/0:27,1:28:56.78:0,57,907	1/1:1,17:18:51.03:467,51,0	0/0:22,1:23:29.69:0,30,588	0/0:28,0:28:84.25:0,84,968	0/0:23,0:23:51.13:0,51,568	0/0:26,0:26:66.15:0,66,747	0/0:21,0:21:60.18:0,60,692	0/0:17,0:17:51.15:0,51,588	0/0:21,0:21:51.15:0,51,589	1/1:1,24:25:71.93:637,72,0	0/0:30,0:30:81.22:0,81,918	1/1:0,16:16:48.03:439,48,0
chr10	101895221	.	G	GC	4789.67	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.147;DP=775;FS=6.916;HRun=0;HaplotypeScore=71.4506;InbreedingCoeff=0.9998;MQ=86.54;MQ0=0;MQRankSum=-1.227;QD=43.15;ReadPosRankSum=1.124;VQSLOD=5.3898;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,58:59:99:2489,157,0	0/0:10,0:10:30.10:0,30,414	0/0:28,0:28:81.25:0,81,1099	0/0:24,0:24:55.37:0,55,764	0/0:20,0:20:54.18:0,54,754	0/0:30,0:30:86.16:0,86,1184	0/0:29,0:29:87.27:0,87,1195	0/0:28,0:28:81.18:0,81,1023	0/0:27,0:27:78.24:0,78,1071	0/0:23,0:23:69.23:0,69,964	0/0:23,0:23:69.23:0,69,959	0/0:23,0:23:69.22:0,69,948	0/0:25,0:25:75.20:0,75,990	0/0:33,0:33:99:0,99,1378	0/0:36,0:36:99:0,108,1509	0/0:31,0:31:90.29:0,90,1241	0/0:23,0:23:69.23:0,69,963	0/0:23,0:23:63.21:0,63,877	0/0:22,0:22:66.21:0,66,902	0/0:28,0:28:81.27:0,81,1131	0/0:52,0:52:99:0,150,2072	0/0:23,0:23:69.20:0,69,932	0/0:24,0:24:69.20:0,69,927	0/0:35,0:35:99:0,105,1467	0/0:26,0:26:78.23:0,78,1055	1/1:1,34:35:63.37:1535,63,0	0/0:18,0:18:54.17:0,54,738	1/1:0,17:17:48.16:765,48,0
chr10	101895572	.	GGT	G	523.24	PASS	AB=0.948;AC=17;AF=0.315;AN=54;BaseQRankSum=6.501;DP=711;FS=8.783;HRun=0;HaplotypeScore=109.6215;InbreedingCoeff=-0.1673;MQ=72.80;MQ0=8;MQRankSum=2.722;QD=1.34;ReadPosRankSum=1.208;VQSLOD=1.6590;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,4:30:99:115,0,413	0/1:8,0:9:11.50:21,0,12	0/0:41,0:32:0:0,0,0	./.	1/1:12,0:13:5.40:37,5,0	0/1:25,1:26:3.23:3,0,380	0/1:31,2:33:44.34:44,0,634	0/0:28,0:27:2.18:0,2,180	0/0:16,1:18:5.28:0,5,449	0/0:21,0:20:27.06:0,27,370	0/0:18,1:19:5.30:0,5,452	0/1:25,0:26:33.03:53,0,33	1/1:22,0:21:13.54:117,14,0	0/1:30,4:34:41.20:41,0,716	0/1:21,4:26:29.66:30,0,421	0/1:19,0:20:57.81:58,0,62	0/1:30,1:31:21.67:22,0,506	0/0:21,0:25:41.26:0,41,403	0/1:22,1:22:17.70:18,0,138	0/0:20,0:21:30.10:0,30,447	0/1:51,6:55:99:102,0,423	0/0:20,2:22:5.33:0,5,504	0/1:21,0:21:10.04:10,0,202	0/0:32,2:34:0.61:0,1,781	0/1:15,1:16:0.73:1,0,363	0/0:13,0:24:30.33:0,30,254	0/0:26,0:24:22.44:0,22,680	0/0:2,0:11:24:0,24,210
chr10	101895605	.	GTC	G	1167.16	PASS	AB=0.946;AC=13;AF=0.232;AN=56;BaseQRankSum=10.901;DP=691;FS=13.845;HRun=0;HaplotypeScore=115.3212;InbreedingCoeff=0.4431;MQ=56.15;MQ0=18;MQRankSum=0.664;QD=5.67;ReadPosRankSum=0.807;VQSLOD=2.0633;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:23.28:0,23,814	1/1:3,6:9:5.76:71,6,0	0/0:17,0:9:14.38:0,14,151	0/0:31,0:7:14.57:0,15,102	1/1:16,3:19:8.97:110,9,0	0/0:20,0:20:1.70:0,2,600	0/0:38,0:38:59.65:0,60,1105	0/0:26,0:25:55.61:0,56,541	0/0:22,0:22:47.72:0,48,697	0/0:19,0:18:48.04:0,48,623	0/0:19,0:19:44.41:0,44,679	1/1:22,6:27:34.56:325,35,0	1/1:17,8:24:52.32:492,52,0	0/0:35,0:35:49.58:0,50,1096	0/0:28,0:28:31.42:0,31,774	0/1:17,5:22:18.34:235,0,18	0/0:33,0:33:37.44:0,37,828	0/1:22,0:21:4.05:4,0,577	0/0:18,0:18:13.54:0,14,388	0/0:18,0:18:51.01:0,51,675	0/1:39,1:38:20.50:20,0,689	0/0:28,0:28:56.40:0,56,821	0/1:15,1:16:24.74:25,0,290	0/0:37,0:37:56.70:0,57,1192	0/0:20,0:19:41.75:0,42,668	0/1:25,0:24:52.06:52,0,465	0/0:28,0:26:66.48:0,66,1014	0/0:13,0:13:36:0,36,377
chr10	101895611	.	GTGTGTC	G	925.55	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=6.264;DP=714;FS=0.644;HRun=0;HaplotypeScore=168.0163;InbreedingCoeff=0.7902;MQ=58.13;MQ0=16;MQRankSum=1.945;QD=7.17;ReadPosRankSum=0.916;VQSLOD=2.7889;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:72.25:0,72,1818	1/1:12,0:12:14.51:188,15,0	0/0:21,0:11:29.54:0,30,611	0/0:33,0:12:23.52:0,24,414	1/1:5,15:20:5.89:41,6,0	0/0:19,0:19:27.90:0,28,1005	0/0:41,0:41:79.13:0,79,1699	0/0:28,0:27:54.09:0,54,1041	0/0:25,0:25:54.18:0,54,1309	0/0:21,0:20:42.13:0,42,921	0/0:20,0:20:41.90:0,42,921	1/1:13,12:25:0.39:127,0,0	1/1:20,5:25:20.06:569,20,0	0/0:38,0:38:84.25:0,84,1993	0/0:27,0:27:60.21:0,60,1603	1/1:9,14:23:17.53:140,18,0	0/0:36,0:36:58.73:0,59,1574	0/0:18,0:18:39.12:0,39,1104	0/0:19,0:18:35.90:0,36,744	0/0:26,0:26:60.21:0,60,1369	0/0:41,0:40:74.94:0,75,1903	0/0:28,0:28:45.14:0,45,1067	0/0:14,0:14:18.04:0,18,343	0/0:36,0:36:93.25:0,93,2302	0/0:20,0:19:45.15:0,45,1237	0/1:24,0:23:21.11:21,0,884	0/0:27,0:25:57.20:0,57,1631	0/0:12,0:12:33.11:0,33,982
chr10	101896956	.	C	CAT	2184.72	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=11.160;DP=486;FS=2.815;HRun=0;HaplotypeScore=84.3917;InbreedingCoeff=0.7994;MQ=57.27;MQ0=4;MQRankSum=-3.386;QD=15.72;ReadPosRankSum=1.203;VQSLOD=3.0889;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:24.29:24,0,25	1/1:9,0:9:18.05:191,18,0	1/1:12,0:2:0.47:1,0,0	0/1:6,0:3:3.11:3,0,7	1/1:30,0:30:54.13:572,54,0	0/0:18,0:18:54.09:0,54,609	0/0:15,0:15:27.04:0,27,302	0/0:38,0:38:84.11:0,84,916	0/0:13,0:13:33.07:0,33,379	0/0:29,0:29:78.21:0,78,927	0/0:28,0:28:78.22:0,78,965	1/1:6,0:6:5.35:62,5,0	1/1:13,0:13:21.05:223,21,0	0/0:21,0:21:63.11:0,63,717	0/0:22,0:22:60.15:0,60,721	1/1:16,0:16:27.06:280,27,0	0/0:19,0:19:46.62:0,47,564	0/0:23,0:24:15.55:0,16,227	0/0:13,0:13:33.04:0,33,375	0/0:21,0:21:63.09:0,63,726	0/0:9,0:9:23.93:0,24,268	0/0:5,0:5:9.03:0,9,115	0/0:9,0:8:15.05:0,15,190	0/0:9,0:9:21.07:0,21,267	0/0:18,0:18:48.10:0,48,556	1/1:14,10:24:66.10:801,66,0	0/0:36,0:36:96.19:0,96,1128	1/1:6,2:8:17.92:219,18,0
chr10	101896966	.	T	TATAC	5335.70	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-3.300;DP=479;FS=4.229;HRun=0;HaplotypeScore=90.9253;InbreedingCoeff=0.7645;MQ=60.85;MQ0=2;MQRankSum=-0.634;QD=34.87;ReadPosRankSum=2.738;VQSLOD=4.4199;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:30.54:37,0,31	1/1:0,10:10:18.06:502,18,0	0/1:6,0:2:0:0,0,0	0/0:11,0:6:8.55:0,9,51	1/1:0,30:31:54.02:1436,54,0	0/0:20,0:20:60.12:0,60,977	0/0:11,0:11:30.06:0,30,481	0/0:32,0:32:93.24:0,93,1564	0/0:12,0:12:33.10:0,33,617	0/0:27,0:27:81.26:0,81,1492	0/0:30,0:30:87.23:0,87,1554	1/1:0,5:5:5.75:167,6,0	1/1:0,12:13:21.07:586,21,0	0/0:21,0:21:63.17:0,63,1137	0/0:21,0:21:60.19:0,60,1154	1/1:0,15:17:27.09:746,27,0	0/0:19,0:19:45.27:0,45,934	0/1:24,0:24:76.88:77,0,133	0/0:16,0:16:47.93:0,48,675	0/0:24,0:24:69.14:0,69,1202	0/0:10,0:10:27.07:0,27,460	0/0:5,0:5:12.03:0,12,204	0/0:8,0:7:21.03:0,21,341	0/0:9,0:9:24.07:0,24,439	0/0:16,0:16:48.15:0,48,906	1/1:20,3:23:66.20:1436,66,0	0/0:34,0:34:99:0,99,1799	1/1:8,0:8:18.06:349,18,0
chr10	101896972	.	C	CACATAT	2074.54	PASS	AB=1.000;AC=8;AF=0.148;AN=54;BaseQRankSum=6.973;DP=477;FS=7.542;HRun=0;HaplotypeScore=119.8757;InbreedingCoeff=0.6943;MQ=60.81;MQ0=2;MQRankSum=-7.445;QD=22.80;ReadPosRankSum=-1.810;VQSLOD=2.5617;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,11:18:9.03:251,9,0	0/0:11,0:11:9.21:0,9,62	./.	0/0:11,0:7:7.35:0,7,104	0/1:34,0:34:58.96:59,0,159	0/0:18,0:18:51.14:0,51,1146	0/0:11,0:11:24.08:0,24,588	0/0:34,0:34:95.70:0,96,1946	0/0:12,0:12:30.09:0,30,653	0/0:29,0:29:83.62:0,84,1766	0/0:31,0:31:84.24:0,84,1907	0/0:6,0:6:4.86:0,5,29	0/1:11,0:11:1.34:37,0,1	0/0:17,0:18:54.19:0,54,1303	0/0:21,0:21:63.20:0,63,1446	0/0:13,0:13:15.13:0,15,77	0/0:20,0:20:32.67:0,33,1242	0/0:23,0:23:27.19:0,27,578	0/0:14,0:14:42.02:0,42,845	0/0:25,0:25:69.11:0,69,1365	0/0:9,0:9:27.01:0,27,605	0/0:6,0:6:18.06:0,18,383	0/0:7,0:7:21.04:0,21,409	0/0:10,0:10:30.07:0,30,606	0/0:18,0:18:51.16:0,51,1155	1/1:3,15:20:57.08:1588,57,0	0/0:32,0:32:96.25:0,96,2056	1/1:6,1:8:20.81:287,21,0
chr10	101898186	.	GCTCTCTCTCT	G	665.58	PASS	AB=0.804;AC=5;AF=0.089;AN=56;BaseQRankSum=0.854;DP=587;FS=10.621;HRun=0;HaplotypeScore=176.7381;InbreedingCoeff=0.5552;MQ=72.24;MQ0=19;MQRankSum=-0.768;QD=6.16;ReadPosRankSum=-0.075;VQSLOD=1.9791;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,10:30:1.04:280,0,1	0/0:5,0:5:3.48:0,3,117	0/1:42,0:24:0:0,0,0	0/0:52,0:24:0:0,0,0	0/0:21,0:24:32.84:0,33,605	0/0:16,0:18:15.51:0,16,250	0/0:8,0:9:15.04:0,15,353	0/0:29,0:28:23.81:0,24,174	0/0:23,0:23:39.05:0,39,1397	0/0:21,0:21:30.04:0,30,667	0/0:18,0:18:12.03:0,12,302	0/0:17,0:21:29.87:0,30,573	0/0:15,0:17:26.27:0,26,433	0/0:5,0:8:6.02:0,6,260	0/0:10,0:11:21.07:0,21,825	0/0:16,0:20:30.05:0,30,515	0/0:21,0:23:36.02:0,36,1339	0/0:15,0:15:12.93:0,13,458	0/0:22,0:22:32.26:0,32,1016	0/0:18,0:17:23.96:0,24,400	0/0:35,0:34:35.88:0,36,1031	0/0:15,0:20:22.28:0,22,318	0/0:7,0:10:5.85:0,6,89	0/0:16,0:20:28.74:0,29,351	0/0:14,0:16:14.27:0,14,454	0/1:9,10:19:1.28:323,0,1	0/0:17,0:18:34.73:0,35,819	1/1:16,0:13:6.49:167,6,0
chr10	101898261	.	CTG	C	467.17	PASS	AB=0.939;AC=13;AF=0.232;AN=56;BaseQRankSum=-0.798;DP=517;FS=5.342;HRun=0;HaplotypeScore=107.0066;InbreedingCoeff=-0.1493;MQ=58.03;MQ0=12;MQRankSum=2.702;QD=2.15;ReadPosRankSum=-0.033;VQSLOD=1.4006;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:8.38:0,8,42	0/0:11,0:11:20.95:0,21,178	0/0:35,0:15:6.02:0,6,87	0/0:30,0:15:3.01:0,3,44	0/1:12,1:13:15.41:15,0,121	0/1:16,2:17:6.34:6,0,296	0/1:24,1:25:18.49:18,0,167	0/0:19,0:19:6.02:0,6,91	1/1:9,8:20:26.57:242,27,0	0/0:18,0:17:18.06:0,18,272	0/0:9,0:10:12.03:0,12,162	0/1:10,0:10:18.27:18,0,83	0/0:22,0:22:29.95:0,30,246	0/1:17,1:18:18.34:18,0,141	0/0:11,0:11:24.08:0,24,363	0/0:21,1:23:8.53:0,9,277	0/1:20,0:20:9.27:9,0,289	0/0:14,0:14:17.99:0,18,151	0/1:13,1:14:24.36:24,0,82	0/1:18,2:22:47.83:48,0,289	0/0:12,0:12:15.05:0,15,227	0/0:16,0:16:6.02:0,6,91	0/0:14,0:18:26.84:0,27,307	0/1:14,2:17:69.87:103,0,70	0/1:15,0:15:40.70:41,0,141	0/0:21,0:21:10.16:0,10,129	0/1:23,2:24:76.21:76,0,266	0/0:8,0:8:8.99:0,9,74
chr10	101898262	.	T	TGTGC	1954.62	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=5.110;DP=524;FS=2.150;HRun=0;HaplotypeScore=123.6207;InbreedingCoeff=0.6200;MQ=57.84;MQ0=12;MQRankSum=1.353;QD=12.45;ReadPosRankSum=1.198;VQSLOD=3.5197;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:32:9.01:90,0,9	0/1:11,0:11:6.91:130,0,7	0/0:35,0:15:19.44:0,19,242	0/0:30,0:15:42.03:0,42,412	0/1:14,0:14:49.91:91,0,50	0/0:18,0:17:36.29:0,36,524	0/0:26,0:26:65.90:0,66,674	0/0:18,0:18:47.97:0,48,480	0/0:20,0:20:51.05:0,51,525	0/0:18,0:17:51.01:0,51,629	0/0:10,0:10:21.38:0,21,269	0/1:10,0:10:1.02:67,0,1	1/1:22,0:22:2.83:162,3,0	0/0:18,0:18:38.98:0,39,397	0/0:11,0:11:30.08:0,30,496	1/1:23,0:23:36.56:290,37,0	0/0:20,0:20:53.75:0,54,611	1/1:2,11:13:21.04:496,21,0	0/0:14,0:14:33.02:0,33,357	0/0:22,0:22:54.50:0,54,655	0/0:12,0:12:35.99:0,36,452	0/0:16,0:16:35.94:0,36,336	0/0:19,0:18:30.95:0,31,311	0/0:17,0:17:43.20:0,43,403	0/0:17,0:17:30:0,30,346	1/1:23,0:23:55.50:556,55,0	0/0:26,0:25:71.69:0,72,735	1/1:8,0:8:2.73:246,3,0
chr10	101898264	.	T	TGC	2705.70	PASS	AB=0.852;AC=16;AF=0.286;AN=56;BaseQRankSum=-0.089;DP=539;FS=0.000;HRun=0;HaplotypeScore=108.4628;InbreedingCoeff=0.5442;MQ=57.73;MQ0=12;MQRankSum=1.798;QD=14.79;ReadPosRankSum=3.859;VQSLOD=3.6268;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,2:32:26.91:74,0,27	1/1:1,11:12:7.08:329,7,0	0/0:35,0:14:20.79:0,21,227	0/0:31,0:17:48.02:0,48,465	0/1:4,10:17:27.19:214,0,27	0/0:19,0:18:36.92:0,37,438	0/0:25,0:25:68.88:0,69,641	0/0:18,0:18:51:0,51,493	0/0:20,0:20:53.73:0,54,421	0/0:19,0:18:51.06:0,51,578	0/0:10,0:10:3.82:0,4,216	1/1:1,9:10:11.09:214,11,0	1/1:4,17:23:4.22:496,4,0	0/0:18,0:18:39.43:0,39,362	0/0:12,0:12:30.07:0,30,413	1/1:3,19:22:44.48:730,44,0	0/0:20,0:20:56.90:0,57,581	1/1:12,0:12:21.02:223,21,0	0/0:15,0:15:38.97:0,39,368	0/0:22,0:22:42.72:0,43,586	0/0:13,0:13:35.99:0,36,396	0/0:17,0:17:38.94:0,39,356	0/1:19,0:18:66.97:67,0,243	0/0:17,0:17:44.56:0,45,368	0/0:19,0:19:38.97:0,39,380	0/1:24,3:27:12.12:370,0,12	0/0:26,0:25:71.55:0,72,636	1/1:6,2:8:2.73:167,3,0
chr10	101898268	.	T	TGC	603.20	PASS	AB=0.962;AC=9;AF=0.161;AN=56;BaseQRankSum=5.564;DP=544;FS=12.313;HRun=0;HaplotypeScore=111.5847;InbreedingCoeff=0.0157;MQ=57.66;MQ0=13;MQRankSum=3.929;QD=4.28;ReadPosRankSum=6.036;VQSLOD=1.3126;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:10.80:0,11,132	0/1:12,0:12:26.62:50,0,27	0/0:36,0:15:38.25:0,38,308	0/0:32,0:17:48.01:0,48,444	0/1:18,0:18:34.92:35,0,36	0/0:18,0:17:37.29:0,37,440	0/0:26,0:26:71.86:0,72,663	0/0:18,0:18:44.98:0,45,432	0/0:20,0:20:50.82:0,51,401	0/0:19,0:18:51.08:0,51,575	0/0:9,0:9:0.70:0,1,181	1/1:10,0:10:4.11:54,4,0	0/1:23,0:23:28.46:141,0,28	0/0:18,0:18:43.49:0,43,387	0/0:12,0:12:33.07:0,33,439	0/1:23,0:23:7.40:130,0,7	0/0:21,0:21:56.91:0,57,578	0/0:13,0:13:7.77:0,8,50	0/0:14,0:14:38.97:0,39,371	0/0:22,0:21:33.76:0,34,517	0/0:13,0:13:39.02:0,39,427	0/0:19,0:19:44.87:0,45,402	0/1:19,0:18:65.09:65,0,236	0/0:17,0:17:43.63:0,44,362	0/0:20,0:20:44.97:0,45,431	0/1:26,2:28:99:195,0,156	0/0:25,0:24:62.85:0,63,584	0/1:6,2:8:58.30:71,0,58
chr10	101898376	.	AAAC	A	1737.30	PASS	AB=0.533;AC=5;AF=0.089;AN=56;BaseQRankSum=8.572;DP=498;FS=7.420;HRun=0;HaplotypeScore=68.1487;InbreedingCoeff=0.8571;MQ=81.63;MQ0=0;MQRankSum=-1.255;QD=34.06;ReadPosRankSum=1.540;VQSLOD=3.4389;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:20:45.11:717,45,0	0/0:5,0:5:15.05:0,15,316	0/0:14,0:14:36.12:0,36,751	0/0:15,0:15:36.12:0,36,749	0/0:18,0:18:54.19:0,54,1223	0/0:16,0:16:42.14:0,42,934	0/0:12,0:12:33.10:0,33,687	0/0:25,0:25:72.25:0,72,1626	0/0:19,0:19:57.20:0,57,1280	0/0:27,0:27:78.26:0,78,1702	0/0:13,0:13:39.13:0,39,877	0/0:20,0:20:60.21:0,60,1359	0/0:24,0:24:72.23:0,72,1588	0/0:16,0:16:45.15:0,45,971	0/0:18,0:18:54.19:0,54,1224	0/0:18,0:18:45.15:0,45,980	0/0:15,0:15:45.14:0,45,976	0/0:17,0:17:51.12:0,51,1080	0/0:23,0:23:60.21:0,60,1297	0/0:23,0:23:66.23:0,66,1427	0/0:17,0:17:51.18:0,51,1121	0/0:13,0:13:39.13:0,39,868	0/0:17,0:17:51.17:0,51,1111	0/0:11,0:11:27.09:0,27,611	0/0:25,0:25:72.25:0,72,1594	0/1:3,21:24:1.78:976,0,2	0/0:26,0:24:78.27:0,78,1761	1/1:0,7:7:12:170,12,0
chr10	101899322	.	AT	A	5330.68	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.391;DP=718;FS=0.652;HRun=7;HaplotypeScore=74.1532;InbreedingCoeff=0.9946;MQ=83.38;MQ0=0;MQRankSum=-0.564;QD=25.26;ReadPosRankSum=2.644;VQSLOD=5.4774;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,27:33:69.14:703,69,0	1/1:0,15:15:45.10:459,45,0	0/0:21,0:21:55.86:0,56,631	0/0:22,0:22:31.34:0,31,415	1/1:2,27:29:71.81:787,72,0	0/0:22,0:22:57.18:0,57,717	0/0:26,0:26:75.24:0,75,943	0/0:27,0:27:69.21:0,69,855	0/0:26,0:26:72.22:0,72,894	0/0:24,0:23:60.18:0,60,735	0/0:26,0:26:78.24:0,78,961	1/1:2,33:35:93.21:948,93,0	1/1:2,21:23:22.40:544,22,0	0/0:30,0:30:84.24:0,84,1021	0/0:40,0:40:99:0,114,1434	1/1:2,32:34:52.47:850,52,0	0/0:24,0:24:69.22:0,69,867	1/1:0,15:15:42.10:428,42,0	0/0:20,0:20:54.16:0,54,666	0/0:29,0:29:81.24:0,81,995	0/0:23,0:23:66.21:0,66,830	0/0:29,0:29:69.21:0,69,850	0/0:26,0:26:69.16:0,69,825	0/0:32,0:32:93.24:0,93,1128	0/0:26,0:26:69.16:0,69,824	1/1:4,16:20:48.10:489,48,0	0/0:34,0:34:99:0,99,1230	1/1:0,7:7:12.03:122,12,0
chr10	101900215	.	G	GT	1106.33	PASS	AB=0.837;AC=13;AF=0.232;AN=56;BaseQRankSum=-6.921;DP=558;FS=2.202;HRun=13;HaplotypeScore=66.6904;InbreedingCoeff=0.3476;MQ=75.60;MQ0=3;MQRankSum=0.101;QD=7.58;ReadPosRankSum=-1.606;VQSLOD=2.3067;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:32:47.75:0,48,150	1/1:2,6:9:0.28:133,0,0	0/0:30,0:20:18.43:0,18,108	0/0:20,0:15:1.28:0,1,66	1/1:7,18:25:36.39:464,36,0	0/0:21,1:26:22.13:0,22,274	0/0:10,0:10:25.81:0,26,168	0/1:18,2:23:7.07:7,0,177	0/0:17,1:18:10.74:0,11,219	0/0:17,1:19:15.80:0,16,245	0/0:16,0:16:35.64:0,36,245	1/1:1,13:14:30.03:279,30,0	1/1:4,8:12:0.45:147,0,0	0/0:15,1:16:4.81:0,5,178	0/1:15,3:18:4.08:4,0,240	0/1:4,9:14:11.30:179,0,11	0/0:17,0:20:11.24:0,11,255	0/0:15,0:17:40.65:0,41,273	0/0:15,1:18:8.65:0,9,184	0/0:30,1:35:24.35:0,24,403	0/1:13,1:15:40.95:41,0,83	0/0:18,0:19:46.63:0,47,314	0/0:23,1:24:19.64:0,20,279	0/0:13,1:14:4.85:0,5,178	0/0:12,0:13:10.07:0,10,169	0/0:29,0:30:64.33:0,64,437	0/0:29,1:33:10.85:0,11,313	0/1:12,2:16:0.02:0,0,141
chr10	101903237	.	TC	T	923.82	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.411;DP=530;FS=0.000;HRun=1;HaplotypeScore=71.0665;InbreedingCoeff=0.8863;MQ=63.11;MQ0=0;MQRankSum=-10.642;QD=19.25;ReadPosRankSum=2.528;VQSLOD=3.8586;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:42.92:307,43,0	0/0:9,0:9:27.06:0,27,406	0/0:3,0:3:6:0,6,71	0/0:5,0:4:0.87:0,1,59	0/0:24,0:24:72.21:0,72,1104	0/0:21,0:21:63.21:0,63,1007	0/0:17,0:17:51.16:0,51,792	0/0:35,0:35:99:0,105,1614	0/0:16,0:16:48.15:0,48,742	0/0:24,0:24:72.24:0,72,1130	0/0:22,0:22:66.23:0,66,1055	0/0:11,0:11:33.11:0,33,527	0/0:30,0:30:90.31:0,90,1433	0/0:14,0:14:39.13:0,39,607	0/0:40,0:40:99:0,120,1916	0/0:22,0:22:66.21:0,66,1032	0/0:21,0:21:63.18:0,63,959	0/0:9,0:9:27.07:0,27,407	0/0:24,0:24:72.22:0,72,1109	0/0:35,0:35:99:0,102,1581	0/0:8,0:8:24.08:0,24,384	0/0:18,0:18:54.14:0,54,789	0/0:18,0:18:54.18:0,54,862	0/0:8,0:8:24.08:0,24,384	0/0:20,0:20:60.19:0,60,933	1/1:0,25:25:74.72:577,75,0	0/0:28,0:28:84.29:0,84,1338	1/1:1,7:8:23.90:181,24,0
chr10	101903239	.	AACAAAATGT	A	3638.71	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.281;DP=528;FS=0.550;HRun=0;HaplotypeScore=150.3772;InbreedingCoeff=0.9292;MQ=61.22;MQ0=0;MQRankSum=-11.020;QD=75.81;ReadPosRankSum=2.787;VQSLOD=3.9386;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:45.13:1033,45,0	0/0:9,0:9:27.09:0,27,1260	0/0:2,0:2:6.02:0,6,302	0/0:4,0:3:6.49:0,6,89	0/0:24,0:24:72.25:0,72,3632	0/0:23,0:23:69.24:0,69,3200	0/0:16,0:16:48.16:0,48,2426	0/0:38,0:38:99:0,114,5300	0/0:16,0:16:48.16:0,48,2431	0/0:24,0:24:72.25:0,72,3551	0/0:23,0:23:69.24:0,69,3149	0/0:12,0:12:36.12:0,36,1635	0/0:30,0:30:90.28:0,90,4222	0/0:14,0:14:39.13:0,39,1870	0/0:41,0:41:99:0,123,5915	0/0:22,0:22:66.23:0,66,3139	0/0:20,0:20:60.21:0,60,2923	0/0:8,0:8:24.08:0,24,1216	0/0:23,0:23:69.24:0,69,3027	0/0:33,0:33:96.33:0,96,4716	0/0:8,0:8:24.08:0,24,1065	0/0:16,0:16:48.16:0,48,2354	0/0:18,0:18:54.18:0,54,2473	0/0:8,0:8:24.08:0,24,1216	0/0:20,0:20:60.20:0,60,2911	1/1:0,25:25:75.26:1974,75,0	0/0:28,0:28:84.29:0,84,3869	1/1:0,8:8:24.08:632,24,0
chr10	101904813	.	GCTAAA	G	3042.23	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.741;DP=711;FS=0.000;HRun=0;HaplotypeScore=128.8752;InbreedingCoeff=0.9615;MQ=62.23;MQ0=6;MQRankSum=-6.500;QD=49.87;ReadPosRankSum=-0.678;VQSLOD=3.7073;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:39:87.30:1825,87,0	0/0:15,0:15:45.15:0,45,1398	0/0:32,0:28:78.26:0,78,2159	0/0:21,0:21:57.16:0,57,1542	0/0:30,0:30:90.31:0,90,2757	0/0:34,0:33:99:0,102,3088	0/0:21,0:21:60.21:0,60,1862	0/0:36,0:36:99:0,105,3114	0/0:27,0:27:78.27:0,78,2430	0/0:34,0:34:96.32:0,96,2900	0/0:27,0:27:78.22:0,78,2164	0/0:30,0:30:90.31:0,90,2853	0/0:27,0:27:81.26:0,81,2390	0/0:31,0:31:90.31:0,90,2793	0/0:30,0:30:90.31:0,90,2795	0/0:21,0:21:63.22:0,63,1933	0/0:20,0:20:60.21:0,60,1904	0/0:19,0:19:57.20:0,57,1788	0/0:28,0:23:69.21:0,69,1955	0/0:20,0:19:57.18:0,57,1653	0/0:35,0:35:99:0,99,3092	0/0:24,0:24:69.21:0,69,2060	0/0:24,0:24:72.25:0,72,2254	0/0:17,0:17:51.18:0,51,1567	0/0:22,0:22:66.23:0,66,2033	1/1:0,20:20:60.19:1222,60,0	0/0:25,0:25:75.26:0,75,2357	1/1:0,2:2:6.02:130,6,0
chr10	101905462	.	C	CCT	2695.51	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=0.170;DP=590;FS=0.000;HRun=0;HaplotypeScore=68.2456;InbreedingCoeff=0.9978;MQ=78.87;MQ0=0;MQRankSum=0.746;QD=40.84;ReadPosRankSum=1.848;VQSLOD=5.5938;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:27:72.25:1278,72,0	0/0:9,0:9:24.08:0,24,330	0/0:11,0:11:27.09:0,27,371	0/0:15,0:15:33.11:0,33,448	0/0:30,0:30:84.22:0,84,1115	0/0:26,0:26:69.19:0,69,927	0/0:17,0:17:48.12:0,48,624	0/0:28,0:28:72.20:0,72,968	0/0:15,0:15:45.15:0,45,613	0/0:28,0:28:81.27:0,81,1113	0/0:24,0:24:66.21:0,66,887	0/0:23,0:23:57.18:0,57,768	0/0:15,0:15:45.13:0,45,600	0/0:25,0:25:63.21:0,63,865	0/0:24,0:24:66.22:0,66,907	0/0:14,0:14:30.10:0,30,412	0/0:22,0:22:66.22:0,66,907	0/0:13,0:13:39.09:0,39,508	0/0:17,0:17:48.15:0,48,644	0/0:19,0:19:57.18:0,57,766	0/0:29,0:29:78.24:0,78,1055	0/0:20,0:20:51.17:0,51,699	0/0:26,0:26:72.23:0,72,972	0/0:15,0:15:39.13:0,39,536	0/0:25,0:25:75.25:0,75,1031	1/1:5,25:30:66.21:1135,66,0	0/0:34,0:34:90.30:0,90,1236	1/1:0,9:9:24.08:426,24,0
chr10	101906833	.	C	CATATATATATATACAT	7418.36	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=4.978;DP=468;FS=1.974;HRun=0;HaplotypeScore=207.4728;InbreedingCoeff=0.8829;MQ=67.71;MQ0=0;MQRankSum=-9.069;QD=87.27;ReadPosRankSum=-0.440;VQSLOD=4.1985;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,5:20:18.06:1391,18,0	1/1:3,0:3:3.01:143,3,0	0/0:9,0:9:17.88:0,18,295	0/0:5,0:5:6.01:0,6,90	1/1:10,0:10:9.01:391,9,0	0/0:20,0:20:57.15:0,57,2077	0/0:24,0:24:63.20:0,63,2616	0/0:33,0:33:84.28:0,84,3082	0/0:23,0:23:66.21:0,66,2654	0/0:27,0:27:69.23:0,69,2890	0/0:20,0:20:54.19:0,54,2388	1/1:8,0:8:9.03:442,9,0	1/1:10,0:10:12.04:753,12,0	0/0:26,0:26:72.25:0,72,3189	0/0:20,0:20:54.17:0,54,2273	1/1:4,0:4:6.02:299,6,0	0/0:19,0:19:54.18:0,54,2378	1/1:8,0:8:21.07:1149,21,0	0/0:19,0:19:54.18:0,54,2061	0/0:16,0:16:48.15:0,48,1953	0/0:13,0:13:39.12:0,39,1643	0/0:21,0:21:54.17:0,54,2075	0/0:17,0:17:48.16:0,48,2064	0/0:11,0:11:33.11:0,33,1510	0/0:27,0:27:66.20:0,66,2326	1/1:11,6:19:51.13:2617,51,0	0/0:33,0:31:87.30:0,87,3794	1/1:3,0:3:3.01:233,3,0
chr10	101906839	.	T	TATATATATATATATATAA	7370.02	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=8.730;DP=475;FS=1.121;HRun=0;HaplotypeScore=225.5330;InbreedingCoeff=0.7805;MQ=67.28;MQ0=0;MQRankSum=-9.205;QD=85.70;ReadPosRankSum=0.078;VQSLOD=4.5344;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:23.84:993,0,24	1/1:2,0:2:5.99:217,6,0	0/0:7,0:7:17.88:0,18,392	0/0:6,0:6:8.99:0,9,143	1/1:9,0:9:20.95:610,21,0	0/0:21,0:21:63.15:0,63,2474	0/0:21,0:21:63.22:0,63,2990	0/0:35,0:35:99:0,102,3721	0/0:24,0:24:69.22:0,69,3030	0/0:30,0:30:87.24:0,87,3471	0/0:20,0:20:57.18:0,57,2711	1/1:7,0:7:14.97:587,15,0	1/1:3,2:12:12.04:1008,12,0	0/0:26,0:26:75.24:0,75,3649	0/0:22,0:22:63.17:0,63,2700	1/1:5,0:5:12.03:450,12,0	0/0:21,0:21:60.16:0,60,2745	1/1:9,0:9:27.02:1518,27,0	0/0:19,0:19:57.17:0,57,2373	0/0:17,0:17:51.16:0,51,2270	0/0:14,0:14:39.13:0,39,1869	0/0:20,0:20:60.17:0,60,2422	0/0:18,0:18:54.14:0,54,2399	0/0:11,0:11:33.11:0,33,1710	0/0:24,0:24:66.20:0,66,2655	1/1:19,0:19:26.31:1830,26,0	0/0:33,0:31:99:0,99,4442	0/1:5,0:5:56.89:157,0,57
chr10	101908705	.	GGA	G	683.29	PASS	AB=1.000;AC=15;AF=0.288;AN=52;BaseQRankSum=2.279;DP=430;FS=0.772;HRun=0;HaplotypeScore=56.3155;InbreedingCoeff=0.7336;MQ=54.13;MQ0=25;MQRankSum=-0.425;QD=6.97;ReadPosRankSum=-0.796;VQSLOD=2.7782;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:12:7.16:47,7,0	1/1:4,0:4:8.67:70,9,0	0/0:47,0:14:10.23:0,10,113	0/0:81,0:23:17.38:0,17,244	1/1:14,0:13:27.06:309,27,0	0/0:13,0:12:12.51:0,13,179	0/0:14,0:12:0.32:0,0,265	0/0:18,0:18:42.14:0,42,629	0/0:6,0:6:18.03:0,18,231	0/0:6,0:6:15.05:0,15,233	0/0:11,0:11:12.04:0,12,175	1/1:12,0:11:14.85:104,15,0	1/1:17,0:15:10.18:176,10,0	0/0:16,0:14:18:0,18,201	0/0:7,0:7:14.63:0,15,168	1/1:4,11:14:5.91:53,6,0	0/0:14,0:14:12:0,12,147	1/1:9,1:10:8.81:85,9,0	0/0:8,0:5:12.01:0,12,144	0/0:12,0:12:14.19:0,14,395	0/0:19,0:17:33.06:0,33,429	0/0:8,0:8:12.04:0,12,185	0/0:4,2:6:6.02:0,6,94	0/0:20,0:20:23.68:0,24,249	0/0:13,0:11:21.07:0,21,314	./.	0/1:13,0:12:12.91:13,0,246	./.
chr10	101908718	.	GAGGGGAGAGAGAGA	G	244.68	PASS	AB=1.000;AC=10;AF=0.185;AN=54;BaseQRankSum=4.668;DP=355;FS=8.120;HRun=0;HaplotypeScore=91.6886;InbreedingCoeff=0.3604;MQ=49.32;MQ0=39;MQRankSum=1.030;QD=1.94;ReadPosRankSum=1.185;VQSLOD=0.8539;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:8:9.63:10,0,84	0/1:3,0:3:2.80:3,0,54	0/0:38,0:10:15.19:0,15,175	0/1:67,0:15:14.21:14,0,335	1/1:12,0:11:4.83:50,5,0	0/0:11,0:10:5.99:0,6,264	0/0:14,0:10:27.02:0,27,640	0/0:19,0:17:48.06:0,48,1036	0/0:7,0:6:18.05:0,18,356	0/0:8,0:8:23.95:0,24,537	0/0:7,0:7:12.04:0,12,243	0/0:8,0:7:10.77:0,11,110	0/1:9,0:7:47.71:48,0,52	0/0:8,0:7:18.04:0,18,347	0/0:6,0:5:15.04:0,15,331	1/1:14,0:13:5.34:22,5,0	0/0:6,0:6:12:0,12,217	1/1:5,5:9:9.50:235,9,0	0/0:12,0:7:18.02:0,18,319	0/0:13,0:11:30.57:0,31,626	0/0:19,0:16:35.80:0,36,997	0/0:4,0:4:12.04:0,12,290	0/0:4,0:4:6.02:0,6,148	0/0:15,0:13:22.88:0,23,401	0/0:10,0:8:21.07:0,21,481	0/0:3,0:3:2.96:0,3,19	0/0:11,0:11:12.75:0,13,363	./.
chr10	101908774	.	GT	G	93.35	PASS	AC=6;AF=0.136;AN=44;BaseQRankSum=3.787;DP=340;FS=1.553;HRun=1;HaplotypeScore=33.0430;InbreedingCoeff=0.4444;MQ=42.29;MQ0=52;MQRankSum=-2.617;QD=8.49;ReadPosRankSum=0.403;VQSLOD=0.9149;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:101,1:16:40.96:0,41,468	0/0:115,0:11:19.52:0,20,237	./.	0/0:3,0:3:2.61:0,3,23	0/0:5,0:4:8.21:0,8,65	0/0:6,0:4:11.98:0,12,101	./.	0/0:8,0:7:17.82:0,18,131	0/0:5,0:5:5.98:0,6,46	1/1:1,2:3:6.02:78,6,0	./.	0/0:2,0:2:0.47:0,0,1	0/0:5,0:3:2.55:0,3,22	1/1:3,0:2:1.82:5,2,0	0/0:3,0:3:3:0,3,27	0/0:6,0:5:6.41:0,6,48	0/0:10,0:6:14.95:0,15,120	0/0:7,0:7:2.85:0,3,23	0/0:16,1:16:32.86:0,33,264	0/0:1,0:1:0:0,0,0	0/0:4,0:4:2.99:0,3,23	0/0:5,0:5:2.79:0,3,24	0/0:6,0:4:2.99:0,3,23	1/1:1,4:5:14.86:115,15,0	0/0:4,0:4:9.03:0,9,103	./.
chr10	101908777	.	AGG	A	70.26	PASS	AC=4;AF=0.091;AN=44;BaseQRankSum=2.683;DP=358;FS=4.084;HRun=2;HaplotypeScore=35.0354;InbreedingCoeff=0.4055;MQ=41.63;MQ0=57;MQRankSum=-2.287;QD=8.78;ReadPosRankSum=1.528;VQSLOD=0.8203;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:1:0:0,0,0	./.	0/0:106,0:16:35.58:0,36,545	0/0:121,0:11:19.57:0,20,269	./.	0/0:3,0:3:3.01:0,3,61	0/0:4,0:4:10.28:0,10,168	0/0:8,0:6:17.92:0,18,216	./.	0/0:7,0:7:18.06:0,18,338	0/0:5,0:5:6.02:0,6,122	0/0:3,0:3:4.38:0,4,16	./.	./.	0/0:3,0:3:4.26:0,4,59	1/1:3,0:2:0.89:2,1,0	0/0:4,0:4:6.02:0,6,80	0/0:6,0:5:9:0,9,108	0/0:10,0:6:18.05:0,18,296	0/0:7,0:7:6.01:0,6,87	0/0:17,0:16:33.10:0,33,600	0/0:2,0:2:0:0,0,0	0/0:7,0:6:3.01:0,3,61	0/0:7,0:5:2.80:0,3,61	0/0:9,0:7:3.01:0,3,61	1/1:1,4:5:15.03:155,15,0	0/0:4,0:4:9.03:0,9,183	./.
chr10	101908891	.	GGAGGGAGGGAGA	G	1286.01	PASS	AB=0.877;AC=10;AF=0.185;AN=54;BaseQRankSum=2.934;DP=197;FS=0.000;HRun=0;HaplotypeScore=68.1076;InbreedingCoeff=0.2576;MQ=62.80;MQ0=4;MQRankSum=-0.606;QD=19.78;ReadPosRankSum=1.813;VQSLOD=1.6706;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,8:10:3.01:112,3,0	0/1:3,0:3:48.97:87,0,49	1/1:10,0:3:2.01:6,2,0	0/0:14,0:7:3.01:0,3,20	0/0:11,0:11:11.93:0,12,178	0/0:2,0:2:6.02:0,6,335	0/0:5,0:5:15.05:0,15,535	0/0:13,0:12:33.04:0,33,636	./.	0/0:9,0:9:24.04:0,24,702	0/0:6,0:5:12.03:0,12,401	0/1:7,0:8:28.95:29,0,284	0/1:10,0:9:44.55:45,0,303	0/0:5,0:5:15.01:0,15,490	0/0:5,0:3:9.03:0,9,416	0/0:7,0:7:9.01:0,9,152	0/0:13,0:13:34.33:0,34,1132	0/0:7,0:6:17.97:0,18,364	0/0:5,0:5:9.01:0,9,113	0/0:2,0:2:6.02:0,6,166	0/0:6,0:5:12.03:0,12,284	0/0:3,0:2:6.01:0,6,172	0/0:1,0:1:0:0,0,0	0/0:9,0:8:22.89:0,23,1213	0/0:1,0:1:3:0,3,27	0/1:5,8:13:99:469,0,110	0/0:7,0:7:21.06:0,21,940	1/1:1,10:11:18.06:674,18,0
chr10	101908893	.	AGGGAGG	A	1164.19	PASS	AB=0.778;AC=14;AF=0.259;AN=54;BaseQRankSum=5.743;DP=202;FS=15.196;HRun=0;HaplotypeScore=50.1712;InbreedingCoeff=0.2848;MQ=62.33;MQ0=5;MQRankSum=-2.269;QD=12.65;ReadPosRankSum=4.957;VQSLOD=-0.3418;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:3.01:49,3,0	1/1:2,0:3:9:116,9,0	1/1:10,0:3:2.04:6,2,0	0/0:14,0:5:0.06:0,0,1	0/1:3,6:11:4.59:64,0,5	0/0:2,0:2:6.02:0,6,209	0/0:6,0:6:15.05:0,15,361	0/0:13,0:12:33.08:0,33,432	./.	0/0:9,0:9:24.07:0,24,462	0/0:5,0:4:12.04:0,12,295	0/1:5,1:8:3.34:281,0,3	0/1:7,0:10:33.95:119,0,34	0/0:5,0:5:15.01:0,15,342	0/0:5,0:3:6.91:0,7,222	0/1:3,4:7:29.62:65,0,30	0/0:16,0:16:43.36:0,43,844	0/1:7,0:6:81.93:110,0,82	0/0:5,0:5:12.03:0,12,153	0/0:2,0:2:6.02:0,6,109	0/0:6,0:5:12.03:0,12,223	0/0:3,0:2:6.01:0,6,124	0/0:1,0:1:0:0,0,0	0/0:10,0:9:25.90:0,26,747	0/0:1,0:1:3:0,3,27	0/1:12,0:12:99:209,0,166	0/0:7,0:7:21.05:0,21,583	1/1:12,0:11:18.06:295,18,0
chr10	101909876	.	CT	C	229.36	PASS	AB=0.911;AC=6;AF=0.107;AN=56;BaseQRankSum=6.069;DP=534;FS=4.701;HRun=10;HaplotypeScore=56.7323;InbreedingCoeff=0.5850;MQ=72.97;MQ0=3;MQRankSum=0.345;QD=4.78;ReadPosRankSum=0.757;VQSLOD=0.5596;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:35:63.97:0,64,896	0/0:8,0:8:18.70:0,19,220	0/0:19,0:18:7.16:0,7,222	0/0:15,0:11:9.39:0,9,146	0/0:18,0:18:39.10:0,39,424	0/0:25,1:26:37.09:0,37,625	0/0:18,0:19:44.94:0,45,471	0/0:20,0:20:51.06:0,51,542	0/0:18,0:18:45.12:0,45,498	0/1:17,2:19:0.98:1,0,447	0/1:10,1:11:5:5,0,171	0/0:10,0:10:30.08:0,30,332	0/0:23,0:23:54.13:0,54,588	0/0:19,2:22:10.90:0,11,557	0/0:22,0:22:40.13:0,40,656	0/0:13,1:14:15.65:0,16,382	0/0:50,1:51:99:0,114,1439	0/0:29,0:29:63.11:0,63,675	0/0:19,0:20:24.11:0,24,275	0/0:6,0:6:12.01:0,12,117	0/0:9,0:9:27.02:0,27,285	0/0:14,1:16:6.87:0,7,287	0/0:18,0:18:42.10:0,42,456	0/0:27,2:29:29.13:0,29,778	0/0:13,0:13:33.07:0,33,354	1/1:3,11:14:32.98:286,33,0	0/0:25,1:26:37.12:0,37,637	1/1:2,2:4:6:52,6,0
chr10	101912482	.	C	CACAGACAG	6357.82	PASS	AB=0.714;AC=15;AF=0.268;AN=56;BaseQRankSum=-4.064;DP=846;FS=19.707;HRun=0;HaplotypeScore=216.1234;InbreedingCoeff=0.8635;MQ=57.74;MQ0=13;MQRankSum=-9.340;QD=30.86;ReadPosRankSum=-0.514;VQSLOD=2.7882;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:44:20.10:648,20,0	1/1:5,5:11:12.04:494,12,0	0/0:32,0:16:15.04:0,15,264	0/0:42,0:30:24.54:0,25,474	1/1:15,20:39:24.08:975,24,0	0/0:35,0:35:63.19:0,63,1452	0/0:24,0:24:33.10:0,33,732	0/0:45,0:45:63.13:0,63,1008	0/0:27,0:28:45.08:0,45,901	0/0:30,0:30:45.07:0,45,972	0/0:19,0:18:36.11:0,36,828	1/1:7,12:22:29.90:1218,30,0	1/1:12,12:26:30.09:1137,30,0	0/0:21,0:21:42.13:0,42,996	0/0:25,0:25:48.12:0,48,1057	1/1:12,9:21:15.05:618,15,0	0/0:34,0:34:74.44:0,74,1762	0/0:13,0:35:42.14:0,42,782	0/0:25,0:23:33.11:0,33,832	0/0:28,0:28:48.16:0,48,1206	0/0:67,0:67:99:0,108,2403	0/0:29,0:29:60.18:0,60,1400	0/0:22,0:22:39.08:0,39,738	0/0:42,0:42:87.21:0,87,1886	0/0:30,0:30:51.14:0,51,1155	0/1:24,13:40:99:1143,0,100	0/0:27,0:27:60.19:0,60,1396	1/1:1,2:3:3.01:124,3,0
chr10	101912987	.	TA	T	539.38	PASS	AB=0.919;AC=8;AF=0.143;AN=56;BaseQRankSum=4.658;DP=532;FS=14.673;HRun=13;HaplotypeScore=63.8649;InbreedingCoeff=0.4000;MQ=73.47;MQ0=1;MQRankSum=3.701;QD=5.14;ReadPosRankSum=0.713;VQSLOD=0.6350;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:45:53.17:0,53,306	0/0:5,0:5:6.01:0,6,58	0/1:20,0:15:22.84:23,0,40	0/0:12,0:8:5.12:0,5,22	0/0:18,0:20:47.83:0,48,429	0/1:15,2:17:4.78:5,0,272	0/0:19,0:19:48.03:0,48,445	0/0:27,1:32:52.92:0,53,625	0/0:12,0:12:27.04:0,27,262	0/0:15,1:16:8.09:0,8,231	0/0:18,2:20:23.73:0,24,381	0/1:10,1:11:3.90:4,0,121	0/0:18,1:20:17.08:0,17,321	0/0:19,1:20:29.14:0,29,430	0/0:18,0:20:47.91:0,48,447	0/0:19,1:20:23.15:0,23,380	0/0:17,1:18:3.37:0,3,338	0/0:2,0:21:39.77:0,40,199	0/1:18,2:20:5.32:5,0,241	0/0:18,1:21:25.75:0,26,357	0/0:18,0:18:39.04:0,39,368	0/0:18,0:19:41.20:0,41,417	0/0:16,1:17:14.14:0,14,294	0/0:15,0:17:44.71:0,45,391	0/0:13,1:15:16.56:0,17,286	1/1:4,19:23:56.65:414,57,0	0/0:19,0:20:44.91:0,45,421	1/1:1,11:13:31.86:225,32,0
chr10	101914104	.	T	TAC	4405.92	PASS	AB=0.775;AC=16;AF=0.286;AN=56;BaseQRankSum=7.597;DP=859;FS=0.763;HRun=0;HaplotypeScore=127.4045;InbreedingCoeff=0.8365;MQ=59.13;MQ0=11;MQRankSum=0.560;QD=21.08;ReadPosRankSum=3.907;VQSLOD=5.4700;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:28:2.71:234,0,3	1/1:13,0:13:27.06:286,27,0	0/0:52,0:26:27.02:0,27,414	0/0:39,0:20:22.64:0,23,416	1/1:21,0:21:45.08:454,45,0	0/0:34,0:34:84.13:0,84,1051	0/0:40,0:40:99:0,102,1269	0/0:29,0:29:72.13:0,72,873	0/0:30,0:30:72.21:0,72,909	0/0:29,0:29:75.24:0,75,962	0/0:17,0:17:45.14:0,45,577	1/1:39,0:39:17.04:685,17,0	1/1:30,0:30:51.12:563,51,0	0/0:30,0:30:69.20:0,69,866	0/0:28,0:28:69.18:0,69,845	0/1:24,0:24:25.41:363,0,25	0/0:45,0:44:99:0,108,1330	1/1:5,15:20:30.10:487,30,0	0/0:21,0:21:45.04:0,45,512	0/0:14,0:14:36.12:0,36,462	0/0:95,0:95:99:0,229,2835	0/0:26,0:27:72.19:0,72,906	0/0:22,0:22:57.16:0,57,699	0/0:49,0:48:99:0,117,1443	0/0:33,0:33:84.24:0,84,1052	1/1:6,25:31:75.26:1233,75,0	0/0:16,0:16:45.13:0,45,563	1/1:0,3:3:6.02:101,6,0
chr10	101914113	.	A	ACG	4807.63	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=-1.667;DP=877;FS=2.672;HRun=0;HaplotypeScore=133.7583;InbreedingCoeff=0.7927;MQ=56.70;MQ0=14;MQRankSum=0.558;QD=23.92;ReadPosRankSum=5.455;VQSLOD=5.4691;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:14.01:14,0,28	1/1:0,13:13:27.09:476,27,0	0/0:60,0:22:38.94:0,39,428	0/0:39,0:19:48.02:0,48,533	1/1:0,20:20:45.01:793,45,0	0/0:32,0:32:87.09:0,87,1079	0/0:42,0:42:99:0,111,1307	0/0:32,0:32:81.19:0,81,962	0/0:25,0:25:69.20:0,69,911	0/0:28,0:28:75.22:0,75,975	0/0:21,0:21:60.09:0,60,719	1/1:4,36:40:69.52:1173,70,0	1/1:2,24:26:51.17:896,51,0	0/0:29,0:29:78.03:0,78,968	0/0:25,0:25:63.20:0,63,846	1/1:5,18:23:39.13:686,39,0	0/0:45,0:44:99:0,108,1299	1/1:19,0:19:6.86:237,7,0	0/0:19,0:18:44.99:0,45,535	0/0:19,0:19:51.08:0,51,599	0/0:94,0:94:99:0,249,2984	0/0:32,0:32:84.58:0,85,1007	0/0:22,0:22:58.66:0,59,803	0/0:58,0:57:99:0,144,1665	0/0:34,0:34:89.26:0,89,1159	0/1:30,0:30:29.87:478,0,30	0/0:19,0:19:53.80:0,54,624	1/1:3,0:3:6.01:55,6,0
chr10	101914513	.	GT	G	3109.82	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.689;DP=600;FS=5.082;HRun=10;HaplotypeScore=66.2597;InbreedingCoeff=0.9845;MQ=80.04;MQ0=0;MQRankSum=-0.859;QD=20.19;ReadPosRankSum=2.639;VQSLOD=4.7727;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:29:74.98:651,75,0	1/1:1,12:13:23.97:208,24,0	0/0:11,0:11:17.52:0,18,160	0/0:19,0:20:18.82:0,19,225	1/1:4,24:28:65.97:573,66,0	0/0:21,0:21:51.13:0,51,557	0/0:23,0:23:60.16:0,60,657	0/0:31,0:31:72.12:0,72,770	0/0:23,0:23:63.17:0,63,697	0/0:19,1:19:22.07:0,22,472	0/0:13,0:14:32.92:0,33,346	1/1:1,24:25:65.99:573,66,0	1/1:2,28:30:74.98:651,75,0	0/0:26,0:26:66.17:0,66,721	0/0:30,2:32:41.05:0,41,878	1/1:2,22:24:62.98:547,63,0	0/0:30,2:32:41.06:0,41,863	1/1:1,4:5:11.99:104,12,0	0/0:15,1:16:13.04:0,13,359	0/0:21,1:23:37.10:0,37,623	0/0:12,0:12:27.07:0,27,299	0/0:18,0:18:48.12:0,48,523	0/0:21,0:21:34.49:0,34,537	0/0:12,0:12:27.05:0,27,288	0/0:29,0:30:75.04:0,75,811	0/0:3,0:18:43.05:0,43,233	0/0:31,0:32:90:0,90,943	0/0:0,0:11:19.89:0,20,99
chr10	101915307	.	GAGAT	G	4847.61	PASS	AB=0.850;AC=37;AF=0.712;AN=52;BaseQRankSum=-2.742;DP=604;FS=0.692;HRun=0;HaplotypeScore=114.8709;InbreedingCoeff=0.7262;MQ=68.15;MQ0=4;MQRankSum=0.465;QD=12.30;ReadPosRankSum=0.578;VQSLOD=4.1972;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:19.19:0,19,429	0/0:10,0:10:9.03:0,9,171	./.	./.	0/0:26,0:26:0.03:0,0,15	1/1:16,8:23:15.05:229,15,0	1/1:12,8:20:6.02:92,6,0	0/0:37,0:37:1.25:0,1,3	1/1:13,12:25:24.08:366,24,0	1/1:9,7:16:21.06:299,21,0	1/1:9,11:20:24.08:366,24,0	0/0:24,0:25:24.08:0,24,398	0/0:18,0:18:28.34:0,28,484	0/1:14,3:17:30.74:31,0,253	1/1:18,2:20:12.04:183,12,0	0/0:20,0:20:24.08:0,24,430	1/1:11,9:20:14.95:229,15,0	1/1:17,0:16:5.95:56,6,0	1/1:6,4:10:12.02:160,12,0	1/1:8,13:21:36.04:498,36,0	1/1:15,15:30:36.12:549,36,0	1/1:11,5:16:6.02:92,6,0	1/1:9,12:21:24.08:366,24,0	1/1:16,7:24:15.05:229,15,0	1/1:19,11:31:21.06:303,21,0	1/1:18,0:32:31.24:322,31,0	1/1:11,14:25:24.08:366,24,0	1/1:1,0:5:12.01:112,12,0
chr10	101915351	.	TAGATAGATAGAGG	T	1264.68	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=1.504;DP=637;FS=3.625;HRun=0;HaplotypeScore=221.1781;InbreedingCoeff=0.0775;MQ=63.28;MQ0=23;MQRankSum=-0.746;QD=9.44;ReadPosRankSum=-1.326;VQSLOD=1.8277;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:17.98:0,18,865	0/1:9,0:9:36.79:37,0,424	0/0:46,0:19:51.17:0,51,1021	0/0:47,0:13:25:0,25,452	0/0:31,0:31:21.04:0,21,366	0/0:24,0:24:54.15:0,54,1337	0/0:23,0:23:48.16:0,48,1293	0/0:34,0:32:79.96:0,80,1441	0/0:19,0:19:42.13:0,42,1162	0/0:18,0:18:51.18:0,51,1407	0/0:24,0:24:66.18:0,66,1766	0/1:20,0:20:99:330,0,938	0/1:18,0:18:99:248,0,1093	0/0:16,0:16:39.13:0,39,1360	0/1:16,0:16:10.36:10,0,1050	0/1:25,0:25:99:501,0,937	0/0:18,0:18:30.10:0,30,795	1/1:6,13:18:5.91:239,6,0	0/0:10,0:8:21.07:0,21,529	0/0:18,0:18:50.93:0,51,1367	0/0:25,0:25:60.19:0,60,1774	0/0:11,0:11:21.07:0,21,579	0/0:22,0:22:54.19:0,54,1538	0/0:16,0:16:33.11:0,33,917	0/0:28,0:28:69.13:0,69,1715	0/1:27,0:27:33.41:33,0,1073	0/0:29,0:28:63.22:0,63,1847	0/0:13,0:12:31.49:0,31,489
chr10	101915359	.	TAGAGG	T	2252.34	PASS	AB=0.983;AC=13;AF=0.232;AN=56;BaseQRankSum=2.313;DP=634;FS=4.859;HRun=0;HaplotypeScore=140.4563;InbreedingCoeff=0.6337;MQ=68.40;MQ0=23;MQRankSum=-1.774;QD=14.53;ReadPosRankSum=1.825;VQSLOD=2.9353;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,14:25:6.02:114,6,0	1/1:7,0:7:1.23:145,1,0	0/0:51,0:25:69.21:0,69,1391	0/0:53,0:16:26.01:0,26,533	1/1:0,29:29:12.04:218,12,0	0/0:23,0:23:54.12:0,54,1088	0/0:24,0:24:51.15:0,51,1108	0/0:28,0:27:66.21:0,66,1482	0/0:21,0:21:48.07:0,48,806	0/0:19,0:19:57.14:0,57,1085	0/0:25,0:25:69.08:0,69,1209	0/1:22,0:22:17.41:612,0,17	0/1:18,1:19:2.68:513,0,3	0/0:15,0:15:36.11:0,36,858	0/1:16,0:16:16.38:16,0,763	1/1:22,0:22:16.08:706,16,0	0/0:17,0:17:33.04:0,33,464	1/1:15,0:14:6.02:91,6,0	0/0:9,0:7:18:0,18,257	0/0:20,0:20:48.04:0,48,713	0/0:23,0:23:57.05:0,57,840	0/0:10,0:10:20.99:0,21,404	0/0:21,0:21:51.07:0,51,830	0/0:16,0:16:36.06:0,36,611	0/0:30,0:30:75.01:0,75,1437	0/0:29,0:29:81.94:0,82,1437	0/0:30,0:29:72.08:0,72,1270	0/0:14,0:13:35.66:0,36,623
chr10	101915361	.	G	GAT	741.13	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=5.410;DP=643;FS=3.246;HRun=0;HaplotypeScore=123.6012;InbreedingCoeff=0.7581;MQ=68.36;MQ0=23;MQRankSum=-0.518;QD=10.59;ReadPosRankSum=2.806;VQSLOD=3.6314;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:16.75:0,17,243	0/1:7,0:7:22.40:28,0,22	0/0:52,0:25:69.86:0,70,922	0/0:53,0:16:10.08:0,10,285	0/0:29,0:29:11.83:0,12,88	0/0:24,0:24:60.06:0,60,793	0/0:24,0:24:51.16:0,51,742	0/0:26,0:25:69.22:0,69,1023	0/0:22,0:22:50.99:0,51,621	0/0:21,0:21:60.15:0,60,787	0/0:26,0:26:69.17:0,69,890	1/1:17,5:22:51.66:477,52,0	1/1:19,0:19:19.46:152,19,0	0/0:15,0:15:39.13:0,39,577	0/0:16,0:16:39.84:0,40,598	1/1:22,0:22:52.27:232,52,0	0/0:17,0:17:6.81:0,7,257	0/0:15,0:14:5.68:0,6,28	0/0:10,0:8:18.04:0,18,221	0/0:21,0:21:54:0,54,573	0/0:23,0:23:60.02:0,60,691	0/0:10,0:10:20.92:0,21,283	0/0:21,0:21:51.12:0,51,636	0/0:16,0:16:36.08:0,36,460	0/0:31,0:31:75.21:0,75,1018	0/0:32,0:32:90.68:0,91,1150	0/0:30,0:29:69.16:0,69,889	0/0:14,0:13:39.11:0,39,519
chr10	101915362	.	AG	A	1886.69	PASS	AB=0.978;AC=12;AF=0.214;AN=56;BaseQRankSum=5.783;DP=642;FS=0.503;HRun=2;HaplotypeScore=104.1576;InbreedingCoeff=0.7806;MQ=68.85;MQ0=22;MQRankSum=-1.401;QD=14.08;ReadPosRankSum=3.501;VQSLOD=3.2768;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,1:22:20.93:21,0,164	1/1:1,6:7:14.41:157,14,0	0/0:53,0:26:68.28:0,68,1006	0/0:53,0:16:28.32:0,28,357	0/1:29,0:29:5.52:6,0,9	0/0:24,0:24:60.08:0,60,819	0/0:24,0:24:51.17:0,51,740	0/0:26,0:26:75.18:0,75,1059	0/0:22,0:22:54.03:0,54,688	0/0:22,0:22:66.21:0,66,902	0/0:26,0:26:69.22:0,69,938	1/1:5,14:21:56.83:511,57,0	1/1:1,18:19:52.94:638,53,0	0/0:15,0:15:39.13:0,39,572	0/0:15,1:16:17.62:0,18,566	1/1:0,22:22:63.16:711,63,0	0/0:17,0:17:36.01:0,36,395	1/1:14,0:13:4.59:15,5,0	0/0:11,0:9:24.07:0,24,314	0/0:22,0:22:57.07:0,57,688	0/0:23,0:23:60.07:0,60,731	0/0:10,0:10:20.67:0,21,291	0/0:21,0:21:51.16:0,51,668	0/0:15,0:15:36.11:0,36,478	0/0:31,0:31:78.24:0,78,1073	0/0:33,0:33:93.66:0,94,1197	0/0:30,0:29:72.18:0,72,946	0/0:14,0:13:39.07:0,39,488
chr10	101915648	.	T	TCCAGCCCC	4426.04	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-5.110;DP=489;FS=15.544;HRun=0;HaplotypeScore=126.5700;InbreedingCoeff=0.9075;MQ=65.17;MQ0=0;MQRankSum=-8.002;QD=73.77;ReadPosRankSum=0.318;VQSLOD=3.7951;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:78.17:0,78,1758	1/1:1,3:4:6.02:256,6,0	0/0:10,0:8:1.99:0,2,316	0/0:15,0:15:30.08:0,30,660	1/1:4,9:18:15.05:534,15,0	0/0:30,0:30:78.21:0,78,1817	0/0:16,0:16:45.12:0,45,1105	0/0:25,0:24:63.20:0,63,1499	0/0:16,0:16:45.15:0,45,1161	0/0:22,0:22:48.16:0,48,1216	0/0:17,0:17:39.11:0,39,895	1/1:4,7:11:30.10:1153,30,0	1/1:3,9:12:36.12:1385,36,0	0/0:15,0:15:42.12:0,42,957	0/0:20,0:20:54.18:0,54,1392	1/1:2,11:15:27.09:1097,27,0	0/0:34,0:34:96.31:0,96,2379	0/0:6,0:6:8.53:0,9,238	0/0:23,0:23:57.16:0,57,1297	0/0:25,0:25:60.18:0,60,1467	0/0:18,0:18:51.15:0,51,1288	0/0:7,0:7:15.05:0,15,388	0/0:17,0:17:42.06:0,42,1017	0/0:21,0:21:54.16:0,54,1375	0/0:11,0:11:27.09:0,27,683	0/0:14,0:14:36.12:0,36,955	0/0:23,0:23:60.15:0,60,1446	0/0:12,0:12:30.10:0,30,795
chr10	101915736	.	TAC	T	267.05	PASS	AB=0.890;AC=12;AF=0.231;AN=52;BaseQRankSum=3.475;DP=544;FS=2.426;HRun=0;HaplotypeScore=97.2409;InbreedingCoeff=-0.3074;MQ=54.55;MQ0=3;MQRankSum=2.972;QD=1.04;ReadPosRankSum=-0.116;VQSLOD=1.6422;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:9:0,9,77	0/0:3,0:3:2.74:0,3,12	./.	./.	0/0:22,0:22:19.03:0,19,92	0/0:30,2:30:48.10:0,48,676	0/1:16,3:20:45:45,0,348	0/1:44,0:43:2.71:3,0,647	0/1:12,1:13:9.44:9,0,273	0/1:21,2:23:6.17:6,0,531	0/1:21,2:23:24.92:25,0,496	0/0:10,0:10:5.49:0,5,24	0/0:14,0:14:17.23:0,17,113	0/1:14,2:16:34.31:34,0,334	0/0:21,0:22:24.56:0,25,553	0/0:16,0:16:20.23:0,20,139	0/1:38,0:39:40.61:41,0,916	0/1:6,6:12:7.91:89,0,8	0/1:15,2:18:55.52:56,0,209	0/0:22,3:25:17.98:0,18,567	0/1:10,2:12:39.99:40,0,242	0/0:20,1:22:0.47:0,0,510	0/1:15,3:18:33.99:34,0,285	0/1:17,2:20:21.92:22,0,527	0/0:15,0:15:23.82:0,24,326	0/0:30,0:29:53.67:0,54,437	0/0:21,2:23:5.54:0,6,486	0/0:5,0:9:3:0,3,26
chr10	101915771	.	A	ACACACACT	3217.26	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=4.948;DP=631;FS=11.000;HRun=0;HaplotypeScore=177.9323;InbreedingCoeff=0.4376;MQ=60.83;MQ0=6;MQRankSum=-8.307;QD=17.58;ReadPosRankSum=-3.394;VQSLOD=1.6401;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:99:232,0,145	1/1:1,3:5:3.01:94,3,0	0/0:20,0:7:4.84:0,5,91	0/1:18,0:7:2.99:3,0,30	1/1:7,19:32:2:133,2,0	0/0:30,0:29:74.92:0,75,1357	0/0:20,0:20:50.82:0,51,931	0/0:41,0:39:78.38:0,78,1190	0/0:13,0:13:35.98:0,36,707	0/0:26,0:26:62.06:0,62,1115	0/0:26,0:26:63.07:0,63,1139	1/1:5,1:11:6.91:231,7,0	1/1:5,10:17:15.54:429,16,0	0/0:18,0:18:51.55:0,52,993	0/0:22,0:21:57.09:0,57,1123	1/1:3,15:21:12.04:538,12,0	0/0:40,0:40:99:0,114,2026	0/1:13,0:13:50.25:50,0,353	0/0:32,0:31:66.11:0,66,818	0/0:29,0:29:63.22:0,63,1081	0/0:19,0:19:45.48:0,45,698	0/0:23,0:23:57.07:0,57,1176	0/0:25,0:25:50.16:0,50,690	0/0:26,0:26:75.10:0,75,1388	0/0:17,0:17:45.04:0,45,773	0/1:24,0:23:72.24:1259,0,72	0/0:21,0:21:51.04:0,51,1033	0/1:13,0:12:66.71:414,0,67
chr10	101916305	.	G	GA	5614.89	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-9.037;DP=609;FS=17.518;HRun=6;HaplotypeScore=59.6638;InbreedingCoeff=0.9660;MQ=82.90;MQ0=0;MQRankSum=-1.374;QD=32.46;ReadPosRankSum=3.450;VQSLOD=3.2623;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,19:25:67.08:818,67,0	1/1:1,3:4:6.02:75,6,0	0/0:14,0:14:6.05:0,6,215	0/0:24,0:24:34:0,34,369	1/1:2,16:18:45.08:546,45,0	0/0:18,0:18:51.11:0,51,520	0/0:23,0:23:57.10:0,57,569	0/0:25,0:26:68.03:0,68,669	0/0:21,0:21:57.11:0,57,575	0/0:40,0:40:99:0,114,1139	0/0:27,0:27:78.18:0,78,795	1/1:2,13:15:36.12:453,36,0	1/1:4,31:35:96.30:1200,96,0	0/0:17,0:17:51.10:0,51,513	0/0:22,0:22:63.14:0,63,642	1/1:0,14:14:39.12:491,39,0	0/0:24,0:24:66.13:0,66,665	1/1:3,18:21:57.12:697,57,0	0/0:13,0:13:36.08:0,36,367	0/0:35,0:35:99:0,102,1029	0/0:18,0:18:51.04:0,51,490	0/0:25,0:25:72.11:0,72,712	0/0:19,0:19:51.11:0,51,518	0/0:17,0:17:42.09:0,42,428	0/0:27,0:27:75.15:0,75,756	1/1:1,32:33:90.27:1107,90,0	0/0:26,0:26:75.17:0,75,763	1/1:0,8:8:18.06:226,18,0
chr10	101916774	.	A	ATGTGTGTGTGTTTGTGTG	1972.80	PASS	AB=0.880;AC=14;AF=0.250;AN=56;BaseQRankSum=7.160;DP=941;FS=25.494;HRun=0;HaplotypeScore=418.3021;InbreedingCoeff=0.5572;MQ=61.80;MQ0=7;MQRankSum=-8.833;QD=7.65;ReadPosRankSum=-2.135;VQSLOD=0.3839;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,21:48:4.72:179,0,5	1/1:12,0:12:3.01:33,3,0	0/0:50,0:27:40.77:0,41,579	0/0:64,0:35:39.33:0,39,733	1/1:26,0:26:5.63:25,6,0	0/0:37,0:37:93.26:0,93,4030	0/1:32,0:35:49.72:50,0,1994	0/0:31,0:34:71.88:0,72,1622	0/0:41,0:42:99:0,111,4113	0/0:33,0:33:90.25:0,90,3107	0/0:14,0:16:42.11:0,42,1573	0/1:36,0:36:4.79:63,0,5	0/1:41,0:42:25.56:225,0,26	0/0:33,0:36:96.24:0,96,3436	0/0:34,0:35:99:0,99,4104	1/1:21,0:21:10.46:114,10,0	0/0:25,0:29:72.20:0,72,2857	0/0:30,0:30:0.75:0,1,349	0/0:26,0:25:42.05:0,42,986	0/0:19,0:20:51.14:0,51,1944	0/0:90,0:91:99:0,219,6753	0/0:27,0:29:60.11:0,60,2113	0/0:21,0:22:60.05:0,60,1535	0/0:34,0:34:77.59:0,78,2545	0/0:33,0:35:81.11:0,81,3151	1/1:34,0:34:81.68:1387,82,0	0/0:19,0:20:51.11:0,51,1947	1/1:3,0:3:8.94:66,9,0
chr10	101916778	.	G	GTGTGTGTT	5581.17	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=5.855;DP=926;FS=12.386;HRun=0;HaplotypeScore=242.9609;InbreedingCoeff=0.8610;MQ=62.08;MQ0=7;MQRankSum=-8.255;QD=22.78;ReadPosRankSum=-1.063;VQSLOD=2.8800;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:42:27.98:104,0,28	1/1:10,0:10:3.01:71,3,0	0/0:53,0:29:34.47:0,34,569	0/0:61,0:32:62.77:0,63,880	1/1:23,0:23:8.06:32,8,0	0/0:36,0:36:98.98:0,99,2354	0/0:34,0:34:37.91:0,38,1567	0/0:30,0:30:79.66:0,80,1305	0/0:40,0:40:99:0,111,2517	0/0:32,0:32:96.27:0,96,2123	0/0:16,0:16:45.12:0,45,1024	1/1:35,0:35:18:609,18,0	1/1:41,0:41:57.19:1259,57,0	0/0:35,0:35:99:0,99,2214	0/0:36,0:36:99:0,102,2530	1/1:18,0:18:18.06:412,18,0	0/0:28,0:28:75.20:0,75,1700	1/1:31,0:31:35.12:426,35,0	0/0:24,0:23:54.05:0,54,863	0/0:20,0:20:54.13:0,54,1269	0/0:90,0:90:99:0,237,4682	0/0:30,0:30:66.11:0,66,1300	0/0:22,0:22:63.03:0,63,1098	0/0:39,0:39:95.54:0,96,1763	0/0:34,0:34:84.16:0,84,1947	1/1:2,32:42:95.73:2601,96,0	0/0:21,0:21:57.10:0,57,1225	1/1:3,0:3:8.94:66,9,0
chr10	101916780	.	G	GTGTGTT	6733.17	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=7.969;DP=952;FS=0.734;HRun=0;HaplotypeScore=208.7747;InbreedingCoeff=0.9049;MQ=61.14;MQ0=7;MQRankSum=-11.274;QD=24.66;ReadPosRankSum=-4.704;VQSLOD=3.2221;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:43:46.27:80,0,46	1/1:0,11:11:23.82:248,24,0	0/0:52,0:28:48.13:0,48,618	0/0:60,0:31:66.53:0,67,869	1/1:3,24:29:32.33:205,32,0	0/0:35,0:35:98.98:0,99,2011	0/0:34,0:34:81.81:0,82,1429	0/0:28,0:28:83.90:0,84,1200	0/0:40,0:40:99:0,111,2168	0/0:32,0:32:96.27:0,96,1859	0/0:16,0:16:45.12:0,45,879	1/1:3,34:38:44.73:1111,45,0	1/1:1,45:52:77.98:2059,78,0	0/0:37,0:37:99:0,99,1920	0/0:36,0:36:99:0,105,2191	1/1:1,19:22:41.84:792,42,0	0/0:29,0:29:75.20:0,75,1452	1/1:31,0:31:27.71:618,28,0	0/0:25,0:24:57.05:0,57,801	0/0:20,0:20:54.13:0,54,1084	0/0:89,0:89:99:0,243,4164	0/0:31,0:31:69.10:0,69,1158	0/0:22,0:22:62.78:0,63,960	0/0:39,0:39:95.55:0,96,1562	0/0:33,0:33:84.16:0,84,1666	1/1:43,0:43:26.62:1555,27,0	0/0:21,0:21:56.71:0,57,1048	1/1:4,0:4:8.94:66,9,0
chr10	101916782	.	G	GTGTT	3987.72	PASS	AB=0.997;AC=8;AF=0.143;AN=56;BaseQRankSum=5.860;DP=947;FS=17.238;HRun=0;HaplotypeScore=180.3579;InbreedingCoeff=0.1193;MQ=61.00;MQ0=7;MQRankSum=-9.713;QD=20.24;ReadPosRankSum=3.446;VQSLOD=2.1871;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:5.69:0,6,97	0/1:11,0:11:32.83:33,0,96	0/0:54,0:29:46.08:0,46,536	0/0:61,0:31:69.24:0,69,804	0/0:27,0:27:12.30:0,12,161	0/0:35,0:35:98.98:0,99,1680	0/0:33,0:33:83.39:0,83,1238	0/0:30,0:30:83.93:0,84,1046	0/0:40,0:40:99:0,111,1815	0/0:32,0:32:96.22:0,96,1588	0/0:15,0:15:45.12:0,45,732	0/1:38,0:38:99:468,0,125	0/1:47,1:48:42.08:1007,0,42	0/0:39,0:39:99:0,111,1709	0/0:36,0:36:99:0,105,1826	0/1:23,0:23:99:293,0,115	0/0:28,0:28:78.17:0,78,1212	1/1:4,26:32:10.48:1095,10,0	0/0:26,0:25:60.05:0,60,741	0/0:22,0:22:60.12:0,60,949	0/0:87,0:87:99:0,246,3603	0/0:32,0:32:72.04:0,72,1017	0/0:23,0:23:59.85:0,60,814	0/0:40,0:40:98.54:0,99,1386	0/0:33,0:33:87.15:0,87,1419	0/1:41,0:41:11.89:1038,0,12	0/0:21,0:21:53.41:0,53,878	0/1:4,0:4:11.98:54,0,12
chr10	101919071	.	GCTT	G	7264.48	PASS	AB=0.523;AC=13;AF=0.232;AN=56;BaseQRankSum=15.747;DP=748;FS=1.911;HRun=0;HaplotypeScore=103.4756;InbreedingCoeff=0.8878;MQ=74.62;MQ0=0;MQRankSum=-4.823;QD=38.85;ReadPosRankSum=3.886;VQSLOD=5.9528;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.21:0,66,1448	1/1:0,21:21:57.19:949,57,0	0/0:31,0:31:90.15:0,90,1809	0/0:32,0:32:90:0,90,1845	1/1:1,27:28:66.05:1033,66,0	0/0:35,0:35:96.33:0,96,2156	0/0:21,0:21:60.18:0,60,1273	0/0:33,0:33:93.31:0,93,2055	0/0:31,0:30:84.27:0,84,1859	0/0:30,0:29:84.28:0,84,1838	0/0:26,0:26:78.27:0,78,1767	1/1:1,32:28:72.25:1199,72,0	1/1:1,37:36:87.30:1447,87,0	0/0:26,0:26:78.25:0,78,1725	0/0:31,0:31:93.31:0,93,2047	1/1:0,29:29:81.21:1317,81,0	0/0:20,0:20:54.19:0,54,1223	0/0:22,0:22:63.07:0,63,1282	0/0:29,0:29:78.26:0,78,1690	0/0:28,0:28:81.22:0,81,1777	0/0:12,0:12:36.11:0,36,751	0/0:29,0:29:81.28:0,81,1835	0/0:23,0:23:60.19:0,60,1316	0/0:31,0:31:93.30:0,93,2039	0/0:20,0:20:57.20:0,57,1291	0/1:3,31:32:99:1203,0,114	0/0:29,0:29:87.30:0,87,1970	1/1:0,4:4:8.95:117,9,0
chr10	101919179	.	A	ATAGGTAGGTAGG	1892.19	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=5.732;DP=677;FS=2.155;HRun=0;HaplotypeScore=216.9339;InbreedingCoeff=0.5736;MQ=63.70;MQ0=17;MQRankSum=-3.835;QD=12.21;ReadPosRankSum=-2.140;VQSLOD=2.6063;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:27:52.06:0,52,1234	1/1:15,0:15:42.12:906,42,0	0/0:35,0:21:49.93:0,50,1039	0/0:17,0:7:12.03:0,12,195	1/1:26,2:26:36.04:720,36,0	0/0:24,0:24:36.11:0,36,730	0/0:17,0:16:33.06:0,33,654	0/0:49,0:35:87.26:0,87,2179	0/1:18,0:17:76.78:77,0,493	0/0:28,0:28:75.24:0,75,1560	0/0:25,0:25:39.13:0,39,725	1/1:3,23:31:5.93:108,6,0	./.	0/0:18,0:17:36.07:0,36,594	0/0:23,0:23:45.15:0,45,834	1/1:1,8:16:3.01:60,3,0	0/0:27,0:26:56.93:0,57,949	0/0:14,0:14:29.96:0,30,499	0/0:19,0:18:42.07:0,42,1083	0/0:26,0:26:78.20:0,78,1946	0/0:18,0:17:48.15:0,48,1278	0/0:24,0:23:23.45:0,23,795	0/0:14,0:13:17.86:0,18,278	0/0:22,0:22:55.42:0,55,913	0/0:34,0:34:60.15:0,60,1155	0/1:36,0:35:88.78:89,0,1451	0/0:24,0:24:57.19:0,57,1434	0/1:7,0:7:89.87:90,0,283
chr10	101919183	.	G	GTAGA	3632.73	PASS	AB=0.775;AC=28;AF=0.560;AN=50;BaseQRankSum=-3.201;DP=672;FS=1.545;HRun=0;HaplotypeScore=124.7627;InbreedingCoeff=0.3102;MQ=61.44;MQ0=21;MQRankSum=-1.379;QD=9.29;ReadPosRankSum=-0.479;VQSLOD=2.7392;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:11.55:0,12,111	1/1:15,0:15:0.37:2,0,0	./.	./.	0/0:28,0:25:2.44:0,2,26	1/1:10,10:20:12.04:280,12,0	1/1:17,0:16:3.48:50,3,0	./.	1/1:8,1:17:11.07:162,11,0	1/1:19,10:28:24.04:451,24,0	1/1:9,15:24:12.04:280,12,0	1/1:28,0:25:2.04:6,2,0	0/0:33,0:33:3:0,3,26	0/1:10,9:17:27.98:332,0,28	0/1:11,12:23:2.90:399,0,3	0/0:18,0:16:2.83:0,3,26	0/1:17,10:26:24.48:400,0,24	0/0:13,0:13:6.88:0,7,79	0/0:17,0:16:21.01:0,21,254	0/0:28,0:27:36.06:0,36,496	0/0:17,0:16:18.06:0,18,274	0/1:23,0:24:9.65:61,0,10	1/1:5,7:12:8.26:209,8,0	1/1:21,2:22:24.05:446,24,0	0/1:17,17:34:70.21:329,0,70	1/1:36,0:34:12.91:171,13,0	0/1:23,0:22:23.92:24,0,226	1/1:13,0:13:3.01:31,3,0
chr10	101919228	.	T	TAGATAGATAGAC	1459.81	PASS	AB=1.000;AC=10;AF=0.192;AN=52;BaseQRankSum=2.979;DP=689;FS=0.554;HRun=0;HaplotypeScore=198.5277;InbreedingCoeff=0.1574;MQ=47.87;MQ0=59;MQRankSum=-2.575;QD=7.52;ReadPosRankSum=-1.574;VQSLOD=2.2794;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:14:14.79:0,15,310	0/1:16,0:15:85.33:85,0,138	./.	./.	0/1:32,0:28:26:26,0,363	0/0:16,0:14:23.48:0,23,156	0/1:22,0:13:13.22:13,0,62	0/0:43,0:24:71.76:0,72,575	0/1:23,0:21:99:180,0,101	0/0:28,0:24:9.87:0,10,298	0/0:32,0:25:38.31:0,38,278	0/0:23,0:18:1.04:0,1,152	0/0:34,0:31:44.88:0,45,391	0/0:23,0:19:35.30:0,35,329	0/0:24,0:21:38.24:0,38,286	0/0:24,0:22:35.95:0,36,322	0/0:27,0:23:15.08:0,15,274	0/0:12,0:12:11.96:0,12,258	0/0:20,0:18:53.98:0,54,772	0/0:32,0:28:75.02:0,75,1278	0/0:15,0:14:30.04:0,30,733	0/1:28,0:26:75.40:75,0,293	0/0:24,0:16:23.56:0,24,168	0/1:21,0:20:78.39:78,0,131	0/0:36,0:35:65.32:0,65,614	1/1:33,0:27:48.15:963,48,0	0/0:32,0:30:29.78:0,30,901	1/1:1,16:17:3.01:183,3,0
chr10	101919282	.	CATAGATAGATAG	C	1354.68	PASS	AB=0.857;AC=13;AF=0.260;AN=50;BaseQRankSum=7.068;DP=667;FS=6.851;HRun=0;HaplotypeScore=184.0691;InbreedingCoeff=0.7642;MQ=50.01;MQ0=29;MQRankSum=-6.261;QD=8.47;ReadPosRankSum=-1.050;VQSLOD=1.9971;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:10:2.99:24,3,0	1/1:6,2:9:10.69:216,11,0	./.	./.	1/1:14,17:28:9.03:237,9,0	0/0:24,0:22:54.15:0,54,2459	0/0:24,0:20:33.10:0,33,1410	0/0:45,0:30:11.89:0,12,84	0/0:21,0:21:24.03:0,24,1135	0/0:38,0:37:78.24:0,78,3317	0/0:25,0:20:33.07:0,33,1396	1/1:12,9:18:12.04:409,12,0	1/1:19,14:30:6.02:205,6,0	0/0:19,0:17:27.08:0,27,1369	0/0:23,0:21:42.13:0,42,2085	1/1:14,4:18:12.04:409,12,0	0/0:29,0:25:26.32:0,26,1239	0/0:15,0:14:23.91:0,24,928	0/0:16,0:13:9.03:0,9,450	0/0:40,0:35:60.17:0,60,2801	0/0:17,0:16:24.08:0,24,1146	0/0:17,0:24:18.02:0,18,304	0/0:16,0:23:18.06:0,18,460	0/0:17,0:19:6.90:0,7,144	0/0:23,0:23:33.07:0,33,1282	0/1:25,0:25:17.61:18,0,225	0/0:39,0:37:51.14:0,51,2233	./.
chr10	101919392	.	CAGATAGAT	C	2075.63	PASS	AB=0.768;AC=24;AF=0.480;AN=50;BaseQRankSum=-5.366;DP=574;FS=0.741;HRun=0;HaplotypeScore=131.9688;InbreedingCoeff=0.4926;MQ=48.84;MQ0=14;MQRankSum=-3.362;QD=6.70;ReadPosRankSum=-1.238;VQSLOD=2.4290;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:19:17.23:0,17,307	0/0:8,0:15:11.94:0,12,100	./.	./.	0/0:23,0:22:19.91:0,20,141	0/1:9,11:19:7.66:144,0,8	1/1:11,0:11:5.92:79,6,0	0/0:29,0:24:0:0,0,0	1/1:14,0:13:8.96:117,9,0	1/1:22,5:21:15.02:311,15,0	1/1:19,9:22:3.01:74,3,0	0/0:14,0:24:17.96:0,18,146	0/0:23,0:30:26.94:0,27,219	1/1:13,13:26:3.01:74,3,0	1/1:5,14:18:14.93:251,15,0	0/0:11,0:19:20.95:0,21,171	1/1:21,0:18:8.97:111,9,0	0/0:10,0:7:2.37:0,2,8	0/1:14,0:20:22.33:22,0,134	0/0:11,0:18:14.90:0,15,113	0/0:9,0:16:11.97:0,12,97	1/1:12,11:19:9.03:218,9,0	1/1:18,11:23:3.01:69,3,0	0/1:13,0:12:12.68:109,0,13	0/0:15,0:11:11.89:0,12,87	1/1:16,13:22:30.06:608,30,0	0/1:15,0:27:60.96:62,0,61	./.
chr10	101920109	.	TTC	T	68.49	PASS	AC=10;AF=1.00;AN=10;DP=177;FS=0.000;HRun=0;HaplotypeScore=21.5150;MQ=6.54;MQ0=168;QD=6.23;VQSLOD=2.1553;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,3:3:8:51,8,0	./.	./.	1/1:0,2:2:3.43:20,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:1,1:1:2.04:6,2,0	./.	./.	1/1:0,2:2:5.93:40,6,0	./.	1/1:0,1:1:2.96:19,3,0	./.	./.	./.
chr10	101920297	.	C	CT	613.56	PASS	AB=0.917;AC=29;AF=0.630;AN=46;BaseQRankSum=-1.046;DP=267;FS=0.000;HRun=1;HaplotypeScore=158.9807;InbreedingCoeff=0.1825;MQ=22.97;MQ0=95;MQRankSum=-1.199;QD=3.49;ReadPosRankSum=1.485;VQSLOD=-0.0116;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:10:2.84:0,3,14	0/0:1,0:1:0.89:0,1,2	./.	./.	0/1:12,0:9:5.55:6,0,7	1/1:9,0:6:4.79:37,5,0	./.	0/1:21,0:12:1.34:16,0,1	1/1:4,1:5:6.95:44,7,0	1/1:7,0:3:7.57:84,8,0	1/1:4,2:4:0.48:2,0,0	0/1:6,0:4:6.04:8,0,6	0/1:8,0:5:4.30:39,0,4	1/1:3,3:4:2.74:13,3,0	0/0:5,9:12:2.38:0,2,12	0/1:13,0:11:17.42:17,0,23	1/1:3,3:4:2.54:39,3,0	1/1:5,2:2:2.68:11,3,0	1/1:11,1:5:11.43:81,11,0	0/1:7,7:14:3.28:79,0,3	./.	0/0:5,0:1:1.55:0,2,4	0/1:6,3:8:0.51:1,0,1	1/1:7,7:10:1.55:4,2,0	0/0:5,4:9:6.11:0,6,25	1/1:11,0:9:18.02:129,18,0	1/1:4,6:8:8.27:126,8,0	./.
chr10	101920331	.	TCACACACACACACACACACACACA	T	82.01	PASS	AB=0.762;AC=1;AF=0.026;AN=38;BaseQRankSum=3.981;DP=267;FS=0.000;HRun=0;HaplotypeScore=86.8311;InbreedingCoeff=0.1074;MQ=29.50;MQ0=28;MQRankSum=1.372;QD=5.13;ReadPosRankSum=-1.216;VQSLOD=1.3660;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:3.01:0,3,139	./.	./.	./.	./.	./.	0/0:16,0:13:5.85:0,6,455	0/0:9,0:7:18.06:0,18,618	0/0:8,0:8:6.02:0,6,423	0/0:4,0:4:12.04:0,12,769	0/0:11,0:8:5.29:0,5,464	0/0:7,0:6:0:0,0,0	0/0:5,0:3:4.22:0,4,24	0/0:9,0:9:15.52:0,16,1012	0/0:16,0:16:9.03:0,9,624	./.	0/0:15,0:13:18.06:0,18,1149	0/0:6,0:3:6.02:0,6,161	0/0:8,0:8:12.04:0,12,813	0/0:15,0:14:10.31:0,10,869	./.	./.	0/0:10,0:10:6.02:0,6,449	0/0:19,0:15:12.04:0,12,692	0/0:12,0:9:2.51:0,3,228	0/1:11,5:14:7.14:154,0,7	0/0:16,0:15:24.04:0,24,1657	./.
chr10	101920526	.	TAG	T	164.31	PASS	AB=1.000;AC=13;AF=0.325;AN=40;BaseQRankSum=-0.296;DP=470;FS=4.879;HRun=0;HaplotypeScore=89.8959;InbreedingCoeff=0.4437;MQ=61.60;MQ0=17;MQRankSum=1.206;QD=1.45;ReadPosRankSum=-0.933;VQSLOD=1.2198;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:16:10.72:48,11,0	0/0:6,0:6:2.74:0,3,12	./.	./.	0/0:22,0:21:2.92:0,3,17	./.	0/1:24,0:23:22.54:35,0,23	./.	./.	0/0:13,0:10:2.68:0,3,11	0/0:15,0:14:3.01:0,3,42	0/0:22,0:18:2.99:0,3,23	0/0:18,0:18:5.77:0,6,33	1/1:15,1:16:6.01:63,6,0	0/0:15,0:15:0.47:0,0,1	0/0:20,0:19:11.10:0,11,58	1/1:13,2:15:7.47:52,7,0	./.	1/1:13,0:11:3.62:16,4,0	./.	1/1:10,0:10:0.89:2,1,0	./.	0/0:22,0:19:8.88:0,9,82	0/0:23,0:23:15.05:0,15,213	1/1:16,2:18:8.76:75,9,0	0/0:18,0:18:17.03:0,17,100	0/0:32,0:32:0.47:0,0,2	0/0:9,0:8:2.96:0,3,19
chr10	101920571	.	AG	A	573.17	PASS	AB=0.791;AC=8;AF=0.154;AN=52;BaseQRankSum=4.082;DP=439;FS=0.753;HRun=1;HaplotypeScore=80.0395;InbreedingCoeff=0.0771;MQ=40.57;MQ0=59;MQRankSum=2.587;QD=5.03;ReadPosRankSum=2.848;VQSLOD=0.6850;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,5:18:4.73:206,5,0	0/0:6,0:6:5.68:0,6,58	./.	./.	0/0:19,0:18:5.99:0,6,67	0/0:28,0:24:40.67:0,41,394	0/0:22,0:17:23.06:0,23,208	0/0:22,0:21:45.78:0,46,218	0/1:9,4:9:3.63:71,0,4	0/0:18,0:12:32.58:0,33,370	0/0:11,0:9:18.06:0,18,237	0/0:16,0:11:14.18:0,14,121	0/0:18,0:15:26.29:0,26,279	0/0:14,0:11:22.16:0,22,208	0/0:18,0:18:41.71:0,42,525	0/0:17,0:15:21.84:0,22,319	0/0:19,1:18:6.23:0,6,303	0/1:6,1:5:24.31:24,0,85	0/1:17,3:19:64.25:64,0,190	0/0:12,1:11:24.06:0,24,289	0/0:15,0:12:7.83:0,8,78	0/0:10,0:9:14.56:0,15,162	0/0:12,0:11:18.05:0,18,241	0/0:30,0:28:48.06:0,48,640	0/0:16,0:13:28.29:0,28,275	0/1:13,8:17:99:152,0,336	0/1:11,4:13:89.58:90,0,303	0/1:8,5:9:96.89:97,0,112
chr10	101920572	.	G	GA	768.66	PASS	AB=0.974;AC=15;AF=0.288;AN=52;BaseQRankSum=0.491;DP=442;FS=2.418;HRun=1;HaplotypeScore=82.3757;InbreedingCoeff=0.1043;MQ=40.74;MQ0=60;MQRankSum=-6.744;QD=3.77;ReadPosRankSum=-0.802;VQSLOD=0.0181;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,4:19:25.52:344,26,0	0/1:6,0:6:0.06:0,0,28	./.	./.	0/0:19,0:18:3.01:0,3,35	0/0:27,0:23:5.89:0,6,231	0/1:19,2:17:34.01:34,0,137	1/1:22,0:21:30.01:75,30,0	1/1:11,1:8:9.43:88,9,0	0/0:19,0:13:22.35:0,22,294	0/0:12,0:10:16.26:0,16,212	0/1:17,0:11:2.46:2,0,59	0/0:18,0:15:11.01:0,11,171	0/0:13,0:10:15.90:0,16,124	0/0:17,0:17:36.93:0,37,432	0/0:17,0:15:21.02:0,21,230	0/1:20,1:19:28.62:29,0,226	0/1:7,0:5:15.54:16,0,28	0/1:20,0:19:41.44:41,0,63	0/0:14,0:12:24.06:0,24,289	0/0:15,0:12:0.85:0,1,67	0/0:10,0:9:6.07:0,6,141	0/0:13,0:12:15.03:0,15,177	0/0:29,0:27:43.53:0,44,554	0/1:16,1:14:22.80:23,0,171	0/1:20,1:17:99:163,0,223	0/0:15,0:13:6.07:0,6,310	0/1:13,0:9:39.30:110,0,39
chr10	101920576	.	GA	G	629.07	PASS	AB=0.889;AC=13;AF=0.250;AN=52;BaseQRankSum=4.903;DP=436;FS=9.236;HRun=2;HaplotypeScore=74.2408;InbreedingCoeff=0.3199;MQ=40.58;MQ0=62;MQRankSum=-1.754;QD=3.91;ReadPosRankSum=-1.256;VQSLOD=-0.6726;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:19:32.78:0,33,293	0/1:4,2:6:0.94:30,0,1	./.	./.	1/1:7,0:20:3.01:31,3,0	0/1:22,2:20:3.89:4,0,302	0/0:18,0:15:20.30:0,20,183	0/0:24,0:20:38.70:0,39,114	0/0:13,0:9:14.43:0,14,116	0/0:20,0:15:12.66:0,13,415	0/0:11,0:9:21.50:0,21,264	0/1:18,0:12:9.82:72,0,10	1/1:14,5:16:3.17:129,3,0	0/1:4,8:9:1.18:168,0,1	0/1:13,0:13:3.02:3,0,351	1/1:11,4:13:21.01:221,21,0	0/0:21,0:18:40.10:0,40,364	0/0:5,0:3:8.81:0,9,72	0/0:21,0:19:39.68:0,40,273	0/0:15,0:13:33.02:0,33,398	0/0:15,0:12:19.03:0,19,192	0/0:10,0:9:14.98:0,15,197	0/0:13,1:13:0.13:0,0,198	0/0:27,0:25:51.05:0,51,661	0/0:16,0:13:32.71:0,33,336	0/1:19,1:16:99:105,0,218	0/0:18,0:16:45.14:0,45,576	0/1:12,0:8:11.09:11,0,113
chr10	101920581	.	GA	G	303.02	PASS	AB=0.863;AC=8;AF=0.154;AN=52;BaseQRankSum=5.069;DP=447;FS=3.022;HRun=2;HaplotypeScore=76.9183;InbreedingCoeff=0.2887;MQ=41.42;MQ0=61;MQRankSum=-3.012;QD=2.94;ReadPosRankSum=-1.142;VQSLOD=-0.4009;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:19:46.35:0,46,644	0/1:4,2:6:29.28:29,0,39	./.	./.	1/1:18,3:20:3.01:31,3,0	0/0:23,0:20:44.58:0,45,559	0/0:19,0:15:19.57:0,20,264	0/0:27,0:19:51.17:0,51,728	0/0:13,0:9:19.37:0,19,233	0/0:19,0:14:42.11:0,42,605	0/0:11,0:10:22.63:0,23,318	0/1:19,0:13:81.89:82,0,99	0/1:17,6:20:99:102,0,118	0/0:13,0:10:24.31:0,24,196	0/0:13,0:13:37.93:0,38,524	1/1:10,4:12:14.53:145,15,0	0/0:23,0:20:45.12:0,45,639	0/0:7,0:5:0.98:0,1,105	0/0:20,0:18:48.15:0,48,657	0/0:17,0:15:39.12:0,39,564	0/0:14,0:11:21.89:0,22,259	0/0:10,0:9:19.30:0,19,248	0/0:13,0:12:32.95:0,33,390	0/0:26,0:24:57.02:0,57,778	0/0:18,0:15:43.65:0,44,597	0/1:18,2:16:48.50:48,0,408	0/0:19,0:17:48.16:0,48,713	0/0:13,0:10:14.89:0,15,270
chr10	101920582	.	A	AG	405.81	PASS	AB=0.847;AC=9;AF=0.173;AN=52;BaseQRankSum=4.186;DP=442;FS=0.000;HRun=1;HaplotypeScore=71.6910;InbreedingCoeff=0.2503;MQ=41.71;MQ0=61;MQRankSum=-2.216;QD=3.86;ReadPosRankSum=-1.234;VQSLOD=-0.3981;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:18:46.66:0,47,609	0/1:5,1:6:34.98:39,0,35	./.	./.	1/1:21,0:20:3.01:40,3,0	0/0:23,0:20:44.78:0,45,540	0/0:17,1:14:18.28:0,18,246	0/0:26,0:18:51.17:0,51,703	0/0:13,0:9:19.36:0,19,219	0/0:19,0:14:42.11:0,42,564	0/0:10,0:9:22.63:0,23,297	0/1:14,6:13:81.80:82,0,103	0/1:14,8:19:99:173,0,107	0/0:14,0:11:25.28:0,25,260	0/0:14,0:14:37.92:0,38,490	1/1:9,2:9:12.03:147,12,0	0/0:22,1:20:45.14:0,45,611	0/1:6,1:5:10.77:11,0,112	0/0:20,0:18:48.15:0,48,646	0/0:18,0:16:39.12:0,39,526	0/0:14,0:11:21.89:0,22,244	0/0:10,0:9:18.31:0,18,231	0/0:13,0:12:32.95:0,33,372	0/0:26,0:24:56.97:0,57,734	0/0:20,0:17:43.65:0,44,562	0/1:18,0:14:52.32:52,0,380	0/0:19,0:17:48.16:0,48,667	0/0:12,0:9:21.69:0,22,257
chr10	101920841	.	ATTTAAAAT	A	439.38	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.084;DP=685;FS=4.976;HRun=0;HaplotypeScore=181.3221;InbreedingCoeff=0.9684;MQ=84.83;MQ0=0;MQRankSum=-4.991;QD=48.82;ReadPosRankSum=-0.362;VQSLOD=3.3139;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.29:0,84,3557	0/0:9,0:9:27.09:0,27,1146	0/0:21,0:21:63.19:0,63,2211	0/0:22,0:23:62.81:0,63,2559	0/0:21,0:21:63.22:0,63,2749	0/0:23,0:23:69.24:0,69,3070	0/0:30,0:30:90.31:0,90,3889	0/0:32,0:32:93.31:0,93,3987	0/0:21,0:21:63.22:0,63,2801	0/0:28,0:28:81.28:0,81,3676	0/0:24,0:24:72.25:0,72,2913	0/0:16,0:16:48.16:0,48,2026	0/0:34,0:34:99:0,99,4274	0/0:25,0:25:75.24:0,75,3303	0/0:38,0:38:99:0,114,5005	0/0:34,0:34:99:0,102,4352	0/0:27,0:27:81.28:0,81,3638	1/1:1,8:9:27.08:533,27,0	0/0:26,0:26:78.27:0,78,3498	0/0:25,0:25:75.24:0,75,3299	0/0:21,0:21:63.20:0,63,2616	0/0:28,0:28:84.26:0,84,3608	0/0:26,0:26:78.27:0,78,3517	0/0:25,0:25:75.26:0,75,3401	0/0:35,0:35:99:0,105,4592	0/0:28,0:28:84.29:0,84,3755	0/0:24,0:23:72.25:0,72,3237	0/0:4,0:4:12.04:0,12,551
chr10	101920850	.	A	AC	114	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.341;DP=707;FS=4.943;HRun=0;HaplotypeScore=83.4711;InbreedingCoeff=0.9907;MQ=83.03;MQ0=0;MQRankSum=-4.241;QD=11.40;ReadPosRankSum=-0.248;VQSLOD=4.0294;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.28:0,84,1172	0/0:11,0:11:33.06:0,33,420	0/0:20,0:20:52.86:0,53,715	0/0:23,0:23:56.92:0,57,776	0/0:22,0:22:60.20:0,60,838	0/0:24,0:24:69.23:0,69,964	0/0:33,0:33:96.31:0,96,1325	0/0:32,0:32:93.29:0,93,1256	0/0:20,0:20:57.19:0,57,796	0/0:30,0:30:90.28:0,90,1227	0/0:22,0:22:66.22:0,66,922	0/0:16,0:16:45.14:0,45,612	0/0:35,0:35:99:0,102,1388	0/0:26,0:26:78.25:0,78,1072	0/0:42,0:42:99:0,120,1629	0/0:32,0:32:96.32:0,96,1343	0/0:27,0:27:81.26:0,81,1116	1/1:2,8:10:26.85:208,27,0	0/0:28,0:28:84.28:0,84,1174	0/0:25,0:25:75.25:0,75,1049	0/0:19,0:19:57.19:0,57,797	0/0:29,0:29:84.27:0,84,1158	0/0:26,0:26:78.26:0,78,1091	0/0:31,0:31:93.27:0,93,1279	0/0:33,0:33:99:0,99,1384	0/0:28,0:28:81.26:0,81,1117	0/0:29,0:28:81.25:0,81,1113	0/0:6,0:6:18.06:0,18,252
chr10	101921435	.	A	AC	951.71	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.119;DP=780;FS=1.766;HRun=0;HaplotypeScore=72.0195;InbreedingCoeff=0.8498;MQ=73.54;MQ0=0;MQRankSum=-2.928;QD=33.99;ReadPosRankSum=2.152;VQSLOD=3.3222;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,1741	0/0:12,0:12:36.12:0,36,500	0/0:12,0:12:32.89:0,33,379	0/0:13,0:13:26.80:0,27,275	0/0:32,0:32:96.27:0,96,1295	0/0:30,0:30:90.28:0,90,1234	0/0:16,0:16:48.14:0,48,651	0/0:30,0:31:84.11:0,84,1091	0/0:32,0:32:96.27:0,96,1281	0/0:39,0:39:99:0,117,1511	0/0:37,0:37:99:0,108,1429	0/0:24,0:24:72.22:0,72,966	0/0:37,0:38:99:0,114,1545	0/0:26,0:26:78.16:0,78,992	0/0:25,0:25:75.20:0,75,977	0/0:33,0:33:99:0,99,1307	0/0:26,0:26:78.24:0,78,1066	1/1:1,27:28:66.23:1046,66,0	0/0:25,0:26:68.84:0,69,806	0/0:34,0:34:99:0,102,1312	0/0:33,0:33:96.27:0,96,1268	0/0:25,0:25:75.21:0,75,998	0/0:22,0:22:63.21:0,63,874	0/0:28,0:28:84.26:0,84,1136	0/0:27,0:27:81.21:0,81,1044	0/0:38,0:38:99:0,111,1475	0/0:47,0:46:99:0,141,1878	0/0:2,0:2:3.01:0,3,42
chr10	101921986	.	C	CATAT	814.47	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.262;DP=723;FS=0.986;HRun=0;HaplotypeScore=118.1539;InbreedingCoeff=0.9836;MQ=79.13;MQ0=0;MQRankSum=-0.945;QD=58.18;ReadPosRankSum=0.739;VQSLOD=4.9742;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,141,2240	0/0:16,0:16:39.13:0,39,671	0/0:21,0:21:38.61:0,39,578	0/0:15,0:15:30.09:0,30,475	0/0:20,0:20:57.19:0,57,960	0/0:25,0:25:65.75:0,66,1003	0/0:30,0:30:66.19:0,66,1061	0/0:32,0:32:81.21:0,81,1288	0/0:27,0:27:69.20:0,69,1112	0/0:34,0:34:69.29:0,69,1308	0/0:29,0:29:75.23:0,75,1208	0/0:31,0:31:72.24:0,72,1214	0/0:40,0:40:90.29:0,90,1481	0/0:25,0:25:69.21:0,69,1112	0/0:17,0:17:48.16:0,48,829	0/0:21,0:21:54.16:0,54,855	0/0:32,0:33:80.36:0,80,1448	1/1:1,13:14:36.12:909,36,0	0/0:21,0:21:48.16:0,48,824	0/0:32,0:32:87.27:0,87,1444	0/0:30,0:30:81.23:0,81,1315	0/0:18,0:18:36.11:0,36,595	0/0:19,0:19:45.14:0,45,742	0/0:28,0:28:75.21:0,75,1263	0/0:32,0:32:87.28:0,87,1470	0/0:28,0:29:68.36:0,68,1236	0/0:23,0:23:57.15:0,57,904	0/0:7,0:7:15.05:0,15,259
chr10	101923859	.	TCCTC	T	742.02	PASS	AB=0.783;AC=6;AF=0.107;AN=56;BaseQRankSum=7.868;DP=396;FS=20.909;HRun=0;HaplotypeScore=75.0944;InbreedingCoeff=-0.0945;MQ=46.96;MQ0=35;MQRankSum=-2.842;QD=9.76;ReadPosRankSum=2.991;VQSLOD=0.8398;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:27.16:0,27,160	0/1:3,1:4:9.43:64,0,9	0/0:55,0:7:18.81:0,19,258	0/0:29,0:7:21.07:0,21,310	0/1:11,7:17:67.09:67,0,106	0/0:11,0:11:33.11:0,33,602	0/0:6,0:4:9.02:0,9,140	0/0:20,0:14:36.90:0,37,514	0/0:12,0:11:30.44:0,30,735	0/0:15,0:14:39.13:0,39,731	0/0:8,0:8:24.08:0,24,459	0/1:7,4:11:51.60:162,0,52	0/1:12,4:16:18.17:257,0,18	0/0:7,0:7:20.94:0,21,303	0/0:9,0:8:24.08:0,24,554	0/1:14,6:20:53.57:303,0,54	0/0:14,0:12:24.07:0,24,416	0/1:6,0:6:10.29:10,0,77	0/0:15,0:11:33.03:0,33,539	0/0:11,0:11:33.11:0,33,610	0/0:15,0:14:33.11:0,33,582	0/0:7,0:6:12.04:0,12,170	0/0:4,0:3:3.01:0,3,42	0/0:20,0:18:48.12:0,48,916	0/0:14,0:14:39.13:0,39,776	0/0:12,0:11:23.93:0,24,294	0/0:17,0:17:51.14:0,51,932	0/0:4,0:4:11.94:0,12,144
chr10	101925532	.	GT	G	453.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.118;DP=629;FS=0.933;HRun=6;HaplotypeScore=63.8225;InbreedingCoeff=0.9957;MQ=92.75;MQ0=0;MQRankSum=-3.492;QD=22.65;ReadPosRankSum=1.255;VQSLOD=2.9820;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.22:0,69,908	0/0:13,0:13:36.12:0,36,474	0/0:26,0:26:72.18:0,72,865	0/0:28,0:28:78.22:0,78,949	0/0:35,0:35:99:0,105,1367	0/0:22,0:22:63.20:0,63,816	0/0:18,0:18:48.14:0,48,616	0/0:33,0:33:90.27:0,90,1147	0/0:25,0:25:75.23:0,75,968	0/0:36,0:36:99:0,108,1400	0/0:25,0:25:69.22:0,69,908	0/0:20,0:20:60.20:0,60,789	0/0:28,0:28:78.25:0,78,1025	0/0:16,0:16:42.14:0,42,553	0/0:18,0:18:54.17:0,54,697	0/0:16,0:16:45.15:0,45,592	0/0:20,0:20:57.19:0,57,750	1/1:1,19:20:51.13:548,51,0	0/0:18,0:18:51.17:0,51,671	0/0:29,0:29:87.26:0,87,1115	0/0:12,0:12:36.07:0,36,441	0/0:28,0:28:75.23:0,75,972	0/0:25,0:25:69.22:0,69,908	0/0:16,0:16:45.15:0,45,591	0/0:20,0:20:51.14:0,51,654	0/0:28,0:28:81.24:0,81,1048	0/0:24,0:24:69.22:0,69,895	0/0:7,0:7:21.07:0,21,276
chr10	101925728	.	TA	T	415.35	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.592;DP=640;FS=3.462;HRun=5;HaplotypeScore=61.3776;InbreedingCoeff=0.9989;MQ=75.97;MQ0=0;MQRankSum=-2.723;QD=24.43;ReadPosRankSum=2.396;VQSLOD=2.8640;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:45.13:510,45,0	0/0:13,0:13:36.10:0,36,463	0/0:12,0:12:33.05:0,33,407	0/0:12,0:12:33.10:0,33,421	0/0:22,0:22:60.19:0,60,803	0/0:30,0:30:87.24:0,87,1148	0/0:18,0:18:54.17:0,54,724	0/0:35,0:35:96.29:0,96,1257	0/0:25,0:25:72.24:0,72,984	0/0:39,0:39:99:0,105,1397	0/0:32,0:32:90.30:0,90,1231	0/0:21,0:21:63.20:0,63,845	0/0:22,0:22:63.19:0,63,844	0/0:21,0:21:63.21:0,63,861	0/0:24,0:24:72.23:0,72,969	0/0:14,0:14:36.11:0,36,476	0/0:23,0:23:63.20:0,63,845	0/0:21,0:21:60.16:0,60,783	0/0:22,0:22:66.20:0,66,874	0/0:36,0:36:93.30:0,93,1257	0/0:17,0:17:51.17:0,51,697	0/0:20,0:20:57.19:0,57,779	0/0:35,0:35:99:0,105,1435	0/0:14,0:14:39.09:0,39,512	0/0:20,0:20:57.18:0,57,766	0/0:33,0:33:75.87:0,76,640	0/0:31,0:31:90.27:0,90,1196	0/0:11,0:11:32.95:0,33,272
chr10	101926255	.	CATG	C	1950.78	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.471;DP=645;FS=23.851;HRun=0;HaplotypeScore=93.0844;InbreedingCoeff=0.9947;MQ=76.61;MQ0=0;MQRankSum=-3.962;QD=42.41;ReadPosRankSum=0.697;VQSLOD=2.2733;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.16:0,54,1175	0/0:6,0:6:18.06:0,18,415	0/0:14,0:14:42.14:0,42,924	0/0:17,0:17:38.96:0,39,825	0/0:34,0:33:96.33:0,96,2170	0/0:24,0:24:72.25:0,72,1612	0/0:15,0:15:45.15:0,45,1021	0/0:32,0:32:96.31:0,96,2072	0/0:13,0:13:39.13:0,39,897	0/0:23,0:23:69.24:0,69,1592	0/0:24,0:24:69.22:0,69,1517	0/0:19,0:19:57.20:0,57,1308	0/0:31,0:31:90.29:0,90,2019	0/0:31,0:31:93.31:0,93,2076	0/0:31,0:31:87.30:0,87,1923	0/0:31,0:31:90.30:0,90,2026	0/0:23,0:23:66.23:0,66,1513	0/0:13,0:13:39.12:0,39,829	0/0:18,0:18:54.19:0,54,1233	0/0:31,0:31:93.32:0,93,2117	0/0:24,0:24:69.24:0,69,1538	0/0:26,0:26:75.26:0,75,1709	0/0:25,0:25:69.24:0,69,1579	0/0:15,0:15:45.13:0,45,991	0/0:21,0:21:60.21:0,60,1383	1/1:1,31:32:24.08:1407,24,0	0/0:39,0:39:99:0,117,2665	1/1:0,14:14:39.13:665,39,0
chr10	101926549	.	CCT	C	755.25	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=0.206;DP=613;FS=46.781;HRun=0;HaplotypeScore=118.4255;InbreedingCoeff=-0.0117;MQ=64.13;MQ0=20;MQRankSum=2.291;QD=2.37;ReadPosRankSum=2.012;VQSLOD=0.6014;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:6.42:0,6,44	0/0:9,0:9:2.94:0,3,18	0/0:47,0:29:2.03:0,2,29	0/1:59,0:27:4.49:4,0,41	0/1:27,0:27:0:0,0,0	0/1:22,0:22:51.62:52,0,56	0/0:27,0:27:7.55:0,8,173	0/0:25,0:23:1:0,1,158	0/1:14,0:14:2.35:2,0,26	0/1:18,0:18:14.79:64,0,15	0/1:28,0:27:40.47:40,0,181	0/0:13,0:13:5.78:0,6,44	0/0:26,0:25:2.82:0,3,31	0/0:16,0:15:17.99:0,18,171	0/1:23,0:23:50.94:51,0,157	0/0:20,0:19:2.97:0,3,20	0/0:18,1:19:19.89:0,20,289	0/0:11,0:11:15.93:0,16,97	0/1:15,0:15:22.29:77,0,22	0/1:25,0:24:4.48:4,0,273	0/1:15,0:15:61.58:62,0,91	1/1:12,0:12:14.94:114,15,0	1/1:23,0:24:25.57:207,26,0	0/1:27,0:25:0.66:219,0,1	0/1:10,0:10:6.48:6,0,127	0/0:21,0:20:37.51:0,38,269	0/0:15,5:20:28.42:0,28,188	0/0:12,0:11:8.95:0,9,67
chr10	101926577	.	TCTCA	T	861.48	PASS	AB=0.979;AC=19;AF=0.339;AN=56;BaseQRankSum=2.501;DP=524;FS=7.296;HRun=0;HaplotypeScore=123.7149;InbreedingCoeff=-0.3575;MQ=44.70;MQ0=25;MQRankSum=0.366;QD=2.55;ReadPosRankSum=1.441;VQSLOD=1.9996;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:5.59:0,6,43	0/1:5,0:5:8.13:8,0,12	0/0:9,0:4:2.03:0,2,29	0/1:16,0:4:7.29:7,0,31	0/1:13,0:13:0.01:0,0,0	0/1:17,1:18:63.40:63,0,97	0/0:26,0:24:15.22:0,15,220	0/0:23,0:22:4.05:0,4,176	0/1:13,0:13:13.90:14,0,64	0/1:11,8:18:87.30:113,0,87	0/1:22,0:21:52.33:52,0,326	0/1:13,0:13:5.29:5,0,36	1/1:25,0:23:4.38:109,4,0	0/0:18,0:17:11.95:0,12,299	0/1:24,0:24:86.62:87,0,214	0/1:17,0:14:10.50:10,0,13	0/1:26,0:26:32.36:32,0,340	0/0:10,0:10:6.88:0,7,78	0/1:17,0:15:69.88:79,0,70	0/1:21,0:20:10.93:11,0,340	0/1:28,0:28:74.88:75,0,193	0/1:10,0:10:39.32:88,0,39	0/1:19,0:19:73.24:100,0,73	0/1:32,0:28:99:155,0,152	0/0:20,0:19:17.43:0,17,337	0/0:24,0:21:53:0,53,486	0/0:26,0:26:4.23:0,4,300	0/0:7,0:5:11.96:0,12,107
chr10	101926579	.	TCACACACACACACACACA	T	1575.11	PASS	AB=0.909;AC=13;AF=0.250;AN=52;BaseQRankSum=4.967;DP=512;FS=7.299;HRun=0;HaplotypeScore=212.8236;InbreedingCoeff=0.6226;MQ=44.32;MQ0=26;MQRankSum=-6.051;QD=15.15;ReadPosRankSum=-0.448;VQSLOD=1.5734;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:21:0.94:1,1,0	1/1:3,2:5:3.01:144,3,0	./.	./.	1/1:7,0:12:0.47:1,0,0	0/0:18,0:18:24.08:0,24,1068	0/0:25,0:23:13.69:0,14,550	0/0:20,0:19:18.52:0,19,481	0/0:13,0:13:12.04:0,12,671	0/0:18,0:17:42.12:0,42,1580	0/0:22,0:21:36.12:0,36,1859	1/1:8,3:12:2.83:140,3,0	1/1:19,3:22:5.07:1080,5,0	0/0:16,0:17:16.77:0,17,1079	0/0:23,0:23:21.59:0,22,956	1/1:9,8:15:6.02:275,6,0	0/0:26,0:26:37.01:0,37,1731	0/1:9,0:10:17.84:63,0,18	0/0:17,0:15:27.09:0,27,1515	0/0:22,0:21:23.82:0,24,865	0/0:30,0:30:42.10:0,42,2165	0/0:10,0:10:12.04:0,12,607	0/0:20,0:20:23.83:0,24,1084	0/0:31,0:27:32.41:0,32,1810	0/0:18,0:17:30.10:0,30,2122	0/0:17,0:22:46.58:0,47,1826	0/0:26,0:26:33.58:0,34,1898	0/0:8,0:5:6.02:0,6,295
chr10	101928529	.	A	AAAGG	5871.34	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-9.310;DP=683;FS=11.259;HRun=0;HaplotypeScore=115.7657;InbreedingCoeff=0.8888;MQ=78.48;MQ0=1;MQRankSum=-2.436;QD=39.40;ReadPosRankSum=2.874;VQSLOD=5.0295;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:51.14:0,51,771	1/1:6,7:13:27.01:554,27,0	0/0:31,0:31:48.13:0,48,707	0/0:35,0:35:26.49:0,26,470	1/1:11,19:31:60.07:1289,60,0	0/0:31,0:31:72.20:0,72,1137	0/0:24,0:24:36.11:0,36,569	0/0:29,0:29:45.15:0,45,742	0/0:25,0:25:69.24:0,69,1134	0/0:33,0:33:81.26:0,81,1293	0/0:18,0:18:39.13:0,39,641	1/1:6,17:23:45.15:1086,45,0	1/1:10,24:33:66.23:1610,66,0	0/0:24,0:24:45.15:0,45,743	0/0:22,0:22:57.19:0,57,938	1/1:5,22:27:54.19:1320,54,0	0/1:21,0:21:12.94:13,0,481	0/0:24,0:23:32.44:0,32,861	0/0:15,0:15:30.10:0,30,495	0/0:29,0:29:72.23:0,72,1153	0/0:30,0:30:75.25:0,75,1207	0/0:12,0:12:21.07:0,21,332	0/0:21,0:21:54.18:0,54,888	0/0:21,0:21:48.16:0,48,792	0/0:20,0:20:57.19:0,57,941	0/0:24,0:23:57.03:0,57,521	0/0:33,0:32:75.21:0,75,1164	0/0:7,0:7:18.02:0,18,168
chr10	101928546	.	AAG	A	518.16	PASS	AB=0.563;AC=3;AF=0.054;AN=56;BaseQRankSum=7.143;DP=664;FS=3.556;HRun=0;HaplotypeScore=102.1419;InbreedingCoeff=0.6516;MQ=69.05;MQ0=1;MQRankSum=-2.726;QD=17.27;ReadPosRankSum=1.863;VQSLOD=3.3289;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:58:0,58,1218	0/0:11,0:11:33.11:0,33,482	0/0:25,0:25:75.26:0,75,1364	0/0:22,0:22:50.44:0,50,957	0/0:27,0:27:78.15:0,78,990	0/0:32,0:32:96.33:0,96,1801	0/0:21,0:21:63.20:0,63,1094	0/0:38,0:38:99:0,114,1964	0/0:28,0:28:84.29:0,84,1631	0/0:32,0:32:96.32:0,96,1840	0/0:21,0:21:63.21:0,63,1170	0/0:20,0:20:51.17:0,51,697	0/0:31,0:31:84.27:0,84,1172	0/0:19,0:19:57.19:0,57,1119	0/0:26,0:26:78.27:0,78,1453	0/0:28,0:28:69.23:0,69,925	0/0:18,0:18:54.17:0,54,985	0/0:26,0:25:72.25:0,72,1369	0/0:15,0:15:45.15:0,45,839	0/0:27,0:27:81.28:0,81,1585	0/0:33,0:33:99:0,99,1870	0/0:14,0:14:42.14:0,42,725	0/0:24,0:24:69.22:0,69,1308	0/0:21,0:21:60.21:0,60,1146	0/0:22,0:22:66.23:0,66,1269	1/1:2,19:20:38.98:486,39,0	0/0:30,0:29:90.29:0,90,1719	0/1:2,7:9:20.53:138,0,21
chr10	101928550	.	AGG	A	517.50	PASS	AB=0.563;AC=3;AF=0.054;AN=56;BaseQRankSum=7.866;DP=669;FS=2.368;HRun=2;HaplotypeScore=102.7348;InbreedingCoeff=0.6505;MQ=73.73;MQ0=1;MQRankSum=-2.961;QD=17.25;ReadPosRankSum=0.460;VQSLOD=1.2196;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.08:0,72,1407	0/0:12,0:12:35.14:0,35,491	0/0:27,0:27:81.11:0,81,1436	0/0:24,0:24:50.98:0,51,1133	0/0:22,0:23:19.44:0,19,648	0/0:32,0:32:93.28:0,93,1846	0/0:19,0:19:57.18:0,57,1119	0/0:40,0:40:99:0,120,2357	0/0:31,0:31:93.31:0,93,1822	0/0:29,0:29:87.29:0,87,1720	0/0:22,0:22:66.23:0,66,1310	0/0:19,0:19:54.17:0,54,728	0/0:31,0:30:67.46:0,67,1107	0/0:20,0:20:60.21:0,60,1215	0/0:25,0:25:75.26:0,75,1497	0/0:27,0:27:69.20:0,69,924	0/0:17,0:17:51.16:0,51,989	0/0:26,0:25:75.12:0,75,1422	0/0:17,0:17:50.96:0,51,982	0/0:28,0:28:84.27:0,84,1661	0/0:32,0:32:96.32:0,96,1897	0/0:14,0:14:42.14:0,42,842	0/0:22,0:22:66.23:0,66,1338	0/0:23,0:23:66.23:0,66,1330	0/0:24,0:24:72.25:0,72,1434	1/1:2,19:20:39.65:486,40,0	0/0:30,0:29:90.31:0,90,1808	0/1:2,7:9:19.11:138,0,19
chr10	101930484	.	T	TAAACCAGAGAAAC	2150.42	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.609;DP=833;FS=0.000;HRun=0;HaplotypeScore=313.4890;InbreedingCoeff=0.9444;MQ=87.18;MQ0=0;MQRankSum=-5.478;QD=74.15;ReadPosRankSum=0.715;VQSLOD=2.7450;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:84.29:0,84,2893	0/0:13,0:13:33.11:0,33,1223	0/0:32,0:32:74.70:0,75,1840	0/0:26,0:26:29.22:0,29,1067	0/0:37,0:37:93.31:0,93,3258	0/0:31,0:31:81.74:0,82,2810	0/0:24,0:24:60.21:0,60,1940	0/0:26,0:26:48.16:0,48,1431	0/0:35,0:35:96.33:0,96,3485	0/0:29,0:29:72.24:0,72,2436	0/0:24,0:24:63.22:0,63,2114	0/0:37,0:37:96.32:0,96,3312	0/0:37,0:37:99:0,99,3396	1/1:16,7:29:39.13:2245,39,0	0/0:47,0:47:99:0,123,4334	0/0:48,0:48:99:0,123,4211	0/0:32,0:32:84.24:0,84,2775	0/0:21,0:21:60.21:0,60,2127	0/0:19,0:19:51.16:0,51,1537	0/0:32,0:32:84.27:0,84,2584	0/0:39,0:39:96.33:0,96,3431	0/0:31,0:31:81.28:0,81,2778	0/0:24,0:24:51.01:0,51,1802	0/0:22,0:22:48.16:0,48,1523	0/0:33,0:33:90.31:0,90,3261	0/0:28,0:28:78.25:0,78,2599	0/0:37,0:37:96.31:0,96,3185	0/0:3,0:3:9.03:0,9,342
chr10	101931898	.	TG	T	2065.26	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=12.985;DP=555;FS=8.483;HRun=2;HaplotypeScore=76.0136;InbreedingCoeff=0.8955;MQ=74.37;MQ0=0;MQRankSum=-1.700;QD=15.19;ReadPosRankSum=3.841;VQSLOD=2.9644;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,19:27:41.90:430,42,0	1/1:4,6:10:23.18:181,23,0	0/0:18,0:14:30.27:0,30,286	0/0:10,0:7:2.83:0,3,75	1/1:2,25:27:71.76:594,72,0	0/0:23,0:23:62.01:0,62,911	0/0:18,0:18:48.63:0,49,699	0/0:31,0:31:90.19:0,90,1171	0/0:22,0:22:63.10:0,63,810	0/0:28,0:28:81.24:0,81,1122	0/0:28,0:28:74.02:0,74,1015	1/1:8,19:27:65.92:554,66,0	1/1:6,6:12:18:155,18,0	0/0:17,0:17:51.13:0,51,697	0/0:21,0:21:63.17:0,63,878	1/1:5,14:19:38.99:335,39,0	0/0:19,0:19:57.08:0,57,736	0/1:14,0:14:1.11:1,0,15	0/0:20,0:20:57.11:0,57,744	0/0:20,0:20:42.22:0,42,786	0/0:10,0:10:30.07:0,30,400	0/0:16,0:16:45.11:0,45,609	0/0:26,1:27:48.21:0,48,1008	0/0:14,0:14:42.13:0,42,605	0/0:27,0:27:75.20:0,75,1038	0/0:19,0:19:26.42:0,26,146	0/0:27,0:27:74.97:0,75,1088	0/0:4,0:4:8.50:0,8,43
chr10	101931900	.	GT	G	2290.87	PASS	AB=0.917;AC=13;AF=0.232;AN=56;BaseQRankSum=12.212;DP=551;FS=3.520;HRun=10;HaplotypeScore=75.2467;InbreedingCoeff=0.9005;MQ=74.45;MQ0=0;MQRankSum=1.118;QD=17.10;ReadPosRankSum=2.238;VQSLOD=4.3976;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:40.86:428,41,0	1/1:9,0:9:23.17:181,23,0	0/0:20,0:16:14.41:0,14,164	0/0:10,0:7:11.21:0,11,63	1/1:29,0:29:71.75:594,72,0	0/0:21,1:22:37.10:0,37,628	0/0:16,2:18:22.08:0,22,472	0/0:31,0:31:69.18:0,69,756	0/0:20,0:20:45.20:0,45,508	0/0:28,0:28:66.10:0,66,706	0/0:25,1:26:46.08:0,46,691	1/1:27,0:27:65.91:554,66,0	0/1:10,0:11:3.37:134,0,3	0/0:17,0:17:42.09:0,42,455	0/0:20,0:20:54.15:0,54,597	1/1:18,0:18:38.99:335,39,0	0/0:19,0:19:45.10:0,45,487	1/1:0,13:14:31.96:254,32,0	0/0:20,0:20:45.09:0,45,475	0/0:20,0:20:56.33:0,56,581	0/0:10,0:10:24.01:0,24,232	0/0:16,0:16:38.83:0,39,401	0/0:26,0:27:41.42:0,41,637	0/0:14,0:14:42.08:0,42,447	0/0:28,0:28:69.11:0,69,726	0/0:18,1:19:9.58:0,10,138	0/0:27,1:28:52.04:0,52,754	0/0:4,0:4:8.63:0,9,45
chr10	101933110	.	A	AT	387.28	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=0.901;DP=568;FS=2.172;HRun=6;HaplotypeScore=56.4477;InbreedingCoeff=0.6431;MQ=78.87;MQ0=0;MQRankSum=-2.106;QD=16.14;ReadPosRankSum=-0.974;VQSLOD=3.1507;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:39.08:473,39,0	0/0:11,0:11:30.07:0,30,306	0/0:17,0:18:35.90:0,36,340	0/1:9,0:9:20.10:20,0,106	0/0:33,0:33:93.19:0,93,941	0/0:26,0:26:66.15:0,66,673	0/0:11,0:11:30.07:0,30,306	0/0:28,0:27:72.14:0,72,724	0/0:25,0:25:75.17:0,75,765	0/0:23,0:23:60.13:0,60,607	0/0:30,0:30:78.17:0,78,796	0/0:11,0:11:33.06:0,33,330	0/0:25,0:25:69.13:0,69,690	0/0:22,0:22:66.14:0,66,667	0/0:24,0:24:72.16:0,72,735	0/0:24,0:24:66.11:0,66,653	0/0:15,0:15:39.08:0,39,398	0/0:8,0:8:21.01:0,21,204	0/0:12,0:12:36.08:0,36,367	0/0:37,0:37:99:0,105,1071	0/0:13,0:13:33.07:0,33,337	0/0:24,0:24:63.14:0,63,643	0/0:30,0:30:90.19:0,90,912	0/0:6,0:6:18.04:0,18,184	0/0:26,0:26:72.16:0,72,734	0/0:28,0:28:81.18:0,81,826	0/0:23,0:23:63.12:0,63,635	0/0:11,0:11:27.06:0,27,275
chr10	101935093	.	TA	T	1493.73	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.326;DP=579;FS=16.083;HRun=5;HaplotypeScore=55.6323;InbreedingCoeff=0.9968;MQ=80.74;MQ0=0;MQRankSum=-3.630;QD=28.18;ReadPosRankSum=1.991;VQSLOD=2.1677;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,13:18:51.11:557,51,0	0/0:13,0:13:36.12:0,36,492	0/0:29,0:29:54.32:0,54,688	0/0:18,0:18:44.12:0,44,486	0/0:23,0:23:69.17:0,69,877	0/0:23,0:23:66.18:0,66,854	0/0:15,0:15:42.14:0,42,574	0/0:25,0:25:69.21:0,69,902	0/0:10,0:10:30.10:0,30,410	0/0:28,0:28:78.24:0,78,1020	0/0:26,0:26:78.24:0,78,1035	0/0:13,0:13:39.13:0,39,533	0/0:20,0:20:57.17:0,57,750	0/0:17,0:17:48.13:0,48,624	0/0:29,0:29:84.20:0,84,1081	0/0:21,0:21:60.19:0,60,806	0/0:19,0:19:57.15:0,57,745	0/0:14,0:14:39.13:0,39,533	0/0:23,0:23:69.20:0,69,910	0/0:32,0:32:87.26:0,87,1158	0/0:16,0:16:48.16:0,48,656	0/0:19,0:19:54.17:0,54,721	0/0:20,0:20:57.17:0,57,748	0/0:16,0:16:42.14:0,42,573	0/0:25,0:25:72.18:0,72,908	1/1:2,27:29:78.20:875,78,0	0/0:32,0:32:90.27:0,90,1198	1/1:0,6:6:18.05:204,18,0
chr10	101935184	.	C	CT	2332.87	PASS	AB=0.917;AC=11;AF=0.196;AN=56;BaseQRankSum=-8.443;DP=584;FS=3.960;HRun=10;HaplotypeScore=65.0366;InbreedingCoeff=0.8471;MQ=78.87;MQ0=1;MQRankSum=-2.161;QD=19.94;ReadPosRankSum=1.230;VQSLOD=4.7963;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:20:28.52:0,29,84	1/1:2,9:12:29.91:302,30,0	0/0:16,0:16:6.07:0,6,178	0/1:10,1:11:21.72:22,0,75	1/1:6,26:32:50.54:740,51,0	0/0:25,0:27:61.95:0,62,498	0/0:16,1:17:12.95:0,13,313	0/0:27,1:29:38.93:0,39,510	0/0:17,0:17:47.93:0,48,391	0/0:29,0:29:71.88:0,72,591	0/0:30,0:30:74.88:0,75,616	1/1:0,18:18:48.12:512,48,0	1/1:5,19:24:23.48:455,23,0	0/0:15,0:16:34.96:0,35,273	0/0:19,0:19:38.91:0,39,320	1/1:5,15:20:45.11:480,45,0	0/0:20,0:20:47.93:0,48,394	0/0:12,0:12:23.96:0,24,197	0/0:30,0:31:91.93:0,92,745	0/0:26,0:28:57.55:0,58,451	0/0:13,0:13:35.95:0,36,296	0/0:21,0:21:44.92:0,45,369	0/0:23,0:23:59.91:0,60,490	0/0:17,0:17:25.63:0,26,347	0/0:24,0:24:56.90:0,57,468	0/0:3,0:26:46.85:0,47,138	0/0:26,0:27:67.92:0,68,545	0/0:1,0:4:8.15:0,8,24
chr10	101935352	.	TAC	T	4088.32	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.334;DP=608;FS=2.437;HRun=0;HaplotypeScore=77.8622;InbreedingCoeff=0.9564;MQ=83.40;MQ0=1;MQRankSum=-2.026;QD=41.72;ReadPosRankSum=1.839;VQSLOD=5.5069;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.32:0,93,1758	1/1:0,6:6:15.05:230,15,0	0/0:15,0:15:27.13:0,27,581	0/0:23,0:23:57.11:0,57,908	1/1:1,24:25:66.22:1011,66,0	0/0:24,0:24:69.22:0,69,1297	0/0:18,0:18:54.15:0,54,965	0/0:35,0:35:99:0,105,1970	0/0:28,0:28:84.29:0,84,1596	0/0:27,0:27:78.27:0,78,1506	0/0:16,0:16:48.15:0,48,893	1/1:0,25:25:69.23:1057,69,0	1/1:0,24:23:69.23:1056,69,0	0/0:23,0:23:69.24:0,69,1312	0/0:29,0:29:65.18:0,65,1582	1/1:0,18:18:48.16:735,48,0	0/0:17,0:17:51.17:0,51,984	0/0:13,0:13:39.09:0,39,715	0/0:22,0:22:66.23:0,66,1268	0/0:22,0:22:66.21:0,66,1207	0/0:30,0:30:84.29:0,84,1573	0/0:11,0:11:33.11:0,33,637	0/0:20,0:20:60.21:0,60,1146	0/0:19,0:19:54.18:0,54,1026	0/0:24,0:24:72.25:0,72,1382	0/0:33,0:33:96.33:0,96,1828	0/0:29,0:29:87.26:0,87,1642	0/0:1,0:1:3.01:0,3,58
chr10	101936318	.	CA	C	1704.54	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.025;DP=728;FS=2.466;HRun=4;HaplotypeScore=68.8874;InbreedingCoeff=0.9914;MQ=68.00;MQ0=0;MQRankSum=0.037;QD=28.41;ReadPosRankSum=0.052;VQSLOD=3.2931;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:80.90:1000,81,0	0/0:7,0:7:21.07:0,21,294	0/0:26,0:26:74.04:0,74,972	0/0:19,0:19:51.01:0,51,604	0/0:31,0:31:87.29:0,87,1218	0/0:26,0:26:78.26:0,78,1092	0/0:21,0:21:60.18:0,60,820	0/0:37,0:37:99:0,108,1483	0/0:32,0:32:93.29:0,93,1268	0/0:33,0:33:90.29:0,90,1246	0/0:22,0:22:66.20:0,66,889	0/0:21,0:21:60.19:0,60,821	0/0:31,0:31:93.30:0,93,1270	0/0:28,0:28:84.28:0,84,1176	0/0:33,0:33:87.27:0,87,1185	0/0:28,0:27:78.25:0,78,1075	0/0:22,0:22:63.21:0,63,879	0/0:24,0:24:72.24:0,72,1004	0/0:25,0:25:72.23:0,72,980	0/0:34,0:34:90.30:0,90,1260	0/0:27,0:27:78.23:0,78,1053	0/0:24,0:24:72.23:0,72,988	0/0:26,0:26:72.24:0,72,1008	0/0:34,0:34:99:0,102,1409	0/0:30,0:30:87.29:0,87,1217	1/1:2,20:22:21.15:665,21,0	0/0:27,0:27:75.25:0,75,1048	1/1:0,5:5:15.05:180,15,0
chr10	101936722	.	A	AT	976.88	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.225;DP=548;FS=3.936;HRun=9;HaplotypeScore=67.9793;InbreedingCoeff=0.9004;MQ=76.49;MQ0=0;MQRankSum=-2.702;QD=19.15;ReadPosRankSum=-0.268;VQSLOD=3.8509;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,21:27:34.07:591,34,0	0/0:8,0:8:20.99:0,21,182	0/0:12,0:13:26.29:0,26,217	0/0:10,0:12:4.90:0,5,87	0/0:27,0:27:71.97:0,72,625	0/0:30,0:30:83.97:0,84,729	0/0:17,0:17:35.98:0,36,313	0/0:25,0:25:56.94:0,57,490	0/0:14,0:14:41.98:0,42,360	0/0:17,0:17:47.99:0,48,417	0/0:21,0:21:50.97:0,51,443	0/0:23,0:23:62.97:0,63,547	0/0:18,0:18:44.98:0,45,391	0/0:12,0:12:32.98:0,33,283	0/0:21,0:22:59.02:0,59,501	0/0:21,0:21:56.98:0,57,493	0/0:30,0:30:71.97:0,72,625	0/0:22,0:22:59.99:0,60,521	0/0:20,0:21:52.99:0,53,442	0/0:34,0:34:86.96:0,87,752	0/0:9,0:9:23.98:0,24,205	0/0:11,0:11:32.99:0,33,286	0/0:15,0:15:44.97:0,45,386	0/0:24,0:24:68.97:0,69,596	0/0:24,0:24:37.37:0,37,469	1/1:5,9:14:4.36:273,4,0	0/0:27,0:26:71.98:0,72,625	1/1:0,9:10:23.90:246,24,0
chr10	101937673	.	T	TTCTG	7637.84	PASS	AB=0.625;AC=15;AF=0.268;AN=56;BaseQRankSum=17.457;DP=706;FS=1.492;HRun=0;HaplotypeScore=141.2291;InbreedingCoeff=0.9042;MQ=67.86;MQ0=0;MQRankSum=-8.475;QD=43.15;ReadPosRankSum=1.813;VQSLOD=5.5134;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:30:11.69:1054,0,12	1/1:9,5:14:39.04:631,39,0	0/0:32,0:28:79.34:0,79,951	0/0:23,0:21:53.06:0,53,651	1/1:16,6:22:60.14:1026,60,0	0/0:20,0:20:60.10:0,60,1008	0/0:35,0:35:99:0,105,1628	0/0:34,0:34:99:0,102,1286	0/0:28,0:28:84.22:0,84,1399	0/0:31,0:31:84.22:0,84,1416	0/0:28,0:28:81.17:0,81,1295	1/1:16,6:22:65.98:1070,66,0	1/1:19,6:25:63.79:1105,64,0	0/0:27,0:27:81.22:0,81,1351	0/0:27,0:27:81.19:0,81,1235	1/1:21,10:31:27.31:1350,27,0	0/0:23,0:23:69.15:0,69,1098	0/0:24,0:24:60.06:0,60,787	0/0:18,0:18:48.07:0,48,591	0/0:30,0:30:90.28:0,90,1686	0/0:14,0:14:42.12:0,42,739	0/0:28,0:28:84.19:0,84,1312	0/0:19,0:19:54.16:0,54,960	0/0:31,0:31:93.24:0,93,1541	0/0:20,0:20:60.16:0,60,987	1/1:15,8:23:62.77:1190,63,0	0/0:36,0:36:99:0,108,1872	1/1:2,7:10:9.03:210,9,0
chr10	101937698	.	T	TTTGC	5173.71	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=15.494;DP=692;FS=0.362;HRun=0;HaplotypeScore=143.2062;InbreedingCoeff=0.8840;MQ=61.17;MQ0=1;MQRankSum=-9.132;QD=32.13;ReadPosRankSum=0.804;VQSLOD=4.9685;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:68.12:1033,0,68	1/1:7,4:11:26.93:413,27,0	0/0:35,0:29:63.08:0,63,795	0/0:18,0:15:36.05:0,36,443	1/1:16,5:21:40.62:530,41,0	0/0:26,0:26:72.13:0,72,1046	0/0:28,0:28:78.14:0,78,1227	0/0:32,0:32:60.09:0,60,752	0/0:35,0:35:96.11:0,96,1314	0/0:33,0:33:90.22:0,90,1321	0/0:25,0:25:75.19:0,75,1156	1/1:14,6:21:41.73:614,42,0	1/1:17,6:24:46.69:746,47,0	0/0:28,0:28:69.13:0,69,984	0/0:21,0:21:60.15:0,60,937	1/1:13,9:22:6.12:804,6,0	0/0:20,0:20:57.10:0,57,869	0/0:18,0:18:30.08:0,30,481	0/0:17,0:17:47.87:0,48,542	0/0:37,0:37:99:0,108,1658	0/0:16,0:16:45.10:0,45,692	0/0:24,0:24:72.18:0,72,1108	0/0:26,0:25:66.13:0,66,930	0/0:31,0:31:81.19:0,81,1291	0/0:24,0:24:63.03:0,63,862	1/1:15,8:23:65.75:876,66,0	0/0:37,0:37:99:0,108,1656	1/1:8,0:8:11.96:158,12,0
chr10	101937729	.	AAC	A	702.43	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=7.596;DP=611;FS=2.557;HRun=0;HaplotypeScore=102.4710;InbreedingCoeff=0.3143;MQ=74.27;MQ0=0;MQRankSum=-4.296;QD=5.85;ReadPosRankSum=-3.047;VQSLOD=2.7539;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,13:23:45.01:515,45,0	0/1:10,0:10:20.87:21,0,75	0/0:22,0:22:38.41:0,38,473	0/0:17,0:17:35.96:0,36,566	0/1:17,0:17:43.30:72,0,43	0/0:23,0:23:63.16:0,63,1011	0/0:24,0:24:66.09:0,66,911	0/0:23,0:23:54.05:0,54,735	0/0:34,0:34:97.86:0,98,1625	0/0:24,0:24:66.20:0,66,1068	0/0:23,0:23:60.17:0,60,941	0/0:17,0:17:0.96:0,1,192	0/1:22,0:22:62.11:62,0,162	0/0:24,0:24:66.22:0,66,1114	0/0:18,0:18:54.17:0,54,886	0/0:16,0:16:23.58:0,24,282	0/0:23,0:23:63:0,63,952	1/1:22,1:23:29.63:126,30,0	0/0:17,0:17:42.13:0,42,686	0/0:35,0:35:90.02:0,90,1467	0/0:21,0:21:63.17:0,63,993	0/0:25,0:25:72.23:0,72,1165	0/0:25,0:25:74.97:0,75,1130	0/0:28,0:28:81.08:0,81,1222	0/0:28,0:28:84.29:0,84,1436	0/1:20,0:20:48.11:48,0,84	0/0:24,0:24:71.31:0,71,1127	0/1:5,0:5:9.01:9,0,49
chr10	101938017	.	T	TG	7621.69	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=1.276;DP=828;FS=8.050;HRun=0;HaplotypeScore=86.0422;InbreedingCoeff=0.9996;MQ=91.78;MQ0=0;MQRankSum=-8.327;QD=43.06;ReadPosRankSum=4.249;VQSLOD=5.0659;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,172,2349	1/1:0,14:14:33.11:527,33,0	0/0:32,0:32:96.30:0,96,1313	0/0:35,0:35:99:0,105,1379	1/1:1,23:24:60.20:946,60,0	0/0:23,0:23:69.23:0,69,963	0/0:35,0:35:99:0,102,1373	0/0:32,0:32:90.30:0,90,1258	0/0:27,0:27:78.26:0,78,1090	0/0:29,0:29:84.28:0,84,1174	0/0:23,0:23:63.21:0,63,880	1/1:1,35:36:99:1646,105,0	1/1:0,36:36:99:1675,105,0	0/0:39,0:39:99:0,114,1571	0/0:39,0:39:99:0,117,1619	1/1:1,33:34:84.29:1343,84,0	0/0:22,0:22:66.22:0,66,923	0/0:28,0:28:84.21:0,84,1112	0/0:30,0:30:90.29:0,90,1236	0/0:29,0:29:84.26:0,84,1142	0/0:47,0:47:99:0,141,1970	0/0:19,0:19:54.18:0,54,755	0/0:24,0:24:72.24:0,72,1006	0/0:38,0:37:99:0,114,1594	0/0:18,0:18:54.17:0,54,739	1/1:2,23:25:69.24:1100,69,0	0/0:24,0:24:69.23:0,69,965	1/1:0,8:8:24.08:384,24,0
chr10	101938291	.	TAAA	T	3056.66	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.266;DP=513;FS=0.434;HRun=13;HaplotypeScore=92.2608;InbreedingCoeff=0.9934;MQ=72.55;MQ0=2;MQRankSum=-2.571;QD=25.26;ReadPosRankSum=4.896;VQSLOD=2.9816;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:25:41.17:0,41,291	1/1:0,10:10:27.08:328,27,0	0/0:18,0:14:25.79:0,26,392	0/0:18,0:17:32.42:0,32,582	1/1:5,23:28:57.53:676,58,0	0/0:16,0:17:48.13:0,48,842	0/0:16,0:19:51.13:0,51,887	0/0:34,0:36:84.24:0,84,1506	0/0:13,0:16:30.04:0,30,459	0/0:17,0:18:48.16:0,48,837	0/0:12,0:14:36.08:0,36,622	1/1:4,19:23:47.82:581,48,0	1/1:1,10:11:27.07:328,27,0	0/0:16,0:18:50.18:0,50,862	0/0:17,0:17:45.15:0,45,838	1/1:3,15:18:39.09:468,39,0	0/0:24,0:26:72.20:0,72,1298	0/0:4,0:17:12.46:0,12,29	0/0:18,0:20:39.13:0,39,706	0/0:19,0:21:51.15:0,51,902	0/0:12,0:12:30.08:0,30,512	0/0:11,0:11:30.08:0,30,520	0/0:15,0:16:48.14:0,48,876	0/0:11,0:11:30.09:0,30,543	0/0:17,0:19:54.13:0,54,921	1/1:7,16:23:48.07:583,48,0	0/0:18,0:21:57.13:0,57,991	1/1:0,8:8:24.07:290,24,0
chr10	101939029	.	GA	G	2696.91	PASS	AB=0.522;AC=13;AF=0.232;AN=56;BaseQRankSum=13.978;DP=529;FS=4.862;HRun=6;HaplotypeScore=70.3081;InbreedingCoeff=0.9149;MQ=82.56;MQ0=0;MQRankSum=-11.067;QD=24.97;ReadPosRankSum=0.780;VQSLOD=3.5658;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.21:0,66,868	1/1:2,11:13:30.07:322,30,0	0/0:25,0:24:47.96:0,48,632	0/0:17,0:17:17.99:0,18,428	1/1:1,17:18:44.96:483,45,0	0/0:17,0:17:51.17:0,51,671	0/0:14,0:14:33.11:0,33,434	0/0:24,0:24:63.18:0,63,790	0/0:15,0:15:42.12:0,42,538	0/0:14,0:14:36.11:0,36,462	0/0:18,0:18:51.16:0,51,657	0/1:1,11:12:6.39:289,0,6	1/1:1,18:19:51.13:547,51,0	0/0:20,0:20:54.16:0,54,691	0/0:26,0:26:78.23:0,78,996	1/1:1,13:14:39.10:418,39,0	0/0:32,0:32:90.29:0,90,1183	0/0:21,0:20:60.20:0,60,790	0/0:23,0:23:57.17:0,57,735	0/0:29,0:29:87.27:0,87,1130	0/0:13,0:13:36.10:0,36,459	0/0:9,0:9:27.07:0,27,340	0/0:9,0:9:21.06:0,21,262	0/0:15,0:15:45.09:0,45,558	0/0:28,0:28:81.24:0,81,1049	1/1:5,21:26:26.69:637,27,0	0/0:28,0:28:75.24:0,75,982	1/1:0,6:6:18.04:192,18,0
chr10	101939054	.	AAT	A	2786.88	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.799;DP=480;FS=0.449;HRun=0;HaplotypeScore=71.1404;InbreedingCoeff=0.9892;MQ=71.69;MQ0=0;MQRankSum=-7.086;QD=27.06;ReadPosRankSum=0.499;VQSLOD=4.6248;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.11:0,66,1028	1/1:1,11:12:33.02:395,33,0	0/0:16,0:15:24.35:0,24,494	0/0:10,0:10:19.34:0,19,335	1/1:2,16:18:36.04:461,36,0	0/0:19,0:19:51.15:0,51,844	0/0:14,0:14:39.13:0,39,668	0/0:21,0:21:57.13:0,57,825	0/0:12,0:12:33.09:0,33,537	0/0:16,0:16:48.14:0,48,751	0/0:19,0:19:57.12:0,57,853	1/1:0,11:11:30.06:382,30,0	1/1:3,14:17:33.11:441,33,0	0/0:19,0:19:54.14:0,54,831	0/0:24,0:24:69.22:0,69,1149	1/1:6,7:13:33.08:410,33,0	0/0:27,0:27:78.21:0,78,1277	0/0:23,0:23:65.77:0,66,1017	0/0:24,0:24:65.37:0,65,976	0/0:31,0:31:93.30:0,93,1553	0/0:5,0:5:12.02:0,12,178	0/0:11,0:11:30.09:0,30,488	0/0:8,0:8:18.06:0,18,308	0/0:9,0:9:27.09:0,27,463	0/0:22,0:22:60.17:0,60,973	1/1:6,20:26:26.27:656,26,0	0/0:23,0:23:63.17:0,63,989	1/1:0,6:6:18.06:241,18,0
chr10	101940767	.	GGAAAGAAA	G	1455.43	PASS	AB=1.000;AC=15;AF=0.288;AN=52;BaseQRankSum=7.271;DP=508;FS=3.177;HRun=0;HaplotypeScore=135.7714;InbreedingCoeff=0.7640;MQ=63.05;MQ0=3;MQRankSum=-6.095;QD=9.97;ReadPosRankSum=-0.166;VQSLOD=2.7324;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:2.07:2,0,265	1/1:4,2:6:7.91:135,8,0	./.	0/1:12,0:10:0:0,0,0	1/1:12,5:17:11.33:139,11,0	0/0:16,0:16:24.08:0,24,743	0/0:23,0:23:36.11:0,36,1261	0/0:21,0:20:15:0,15,165	0/0:20,0:20:42.13:0,42,1488	0/0:24,0:24:54.17:0,54,1806	0/0:14,0:14:23.28:0,23,633	1/1:10,3:13:17.89:328,18,0	1/1:14,2:16:14.95:189,15,0	0/0:23,0:23:36.12:0,36,1248	0/0:17,0:17:36.11:0,36,1308	1/1:12,6:18:34.64:654,35,0	0/1:17,0:30:19.23:19,0,649	1/1:8,6:14:8.77:162,9,0	0/0:19,0:19:30.09:0,30,895	0/0:19,0:19:42.14:0,42,1566	0/0:8,0:8:12.04:0,12,415	0/0:15,0:15:24.05:0,24,583	0/0:14,0:13:24.08:0,24,812	0/0:44,0:44:91.60:0,92,2770	0/0:5,0:18:15.86:0,16,128	0/0:24,0:22:24.04:0,24,563	0/0:27,0:26:48.12:0,48,1625	./.
chr10	101940844	.	CAAAGAAAG	C	5049.22	PASS	AB=0.657;AC=9;AF=0.161;AN=56;BaseQRankSum=11.180;DP=616;FS=0.000;HRun=0;HaplotypeScore=177.9440;InbreedingCoeff=0.2559;MQ=51.14;MQ0=3;MQRankSum=-10.932;QD=34.12;ReadPosRankSum=4.192;VQSLOD=4.0767;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:21.42:0,21,341	0/1:3,4:7:25.99:204,0,26	0/0:29,0:11:20.95:0,21,588	0/0:24,0:11:27.05:0,27,538	1/1:10,23:33:9.81:1209,10,0	0/0:16,0:16:48.15:0,48,1786	0/0:23,0:23:60.13:0,60,1786	0/0:21,0:21:54.66:0,55,1584	0/0:33,0:33:96.27:0,96,2941	0/0:32,0:32:87.29:0,87,2860	0/0:16,0:15:42.13:0,42,1347	0/1:7,10:17:76.21:403,0,76	0/1:10,24:34:76.69:996,0,77	0/0:18,0:18:51.15:0,51,1618	0/0:21,0:21:54.19:0,54,1973	0/1:19,12:31:15.74:1290,0,16	0/0:26,0:26:57.03:0,57,1868	0/0:14,0:13:19.69:0,20,263	0/0:24,0:24:69.20:0,69,1922	0/0:28,0:28:78.24:0,78,2740	0/0:7,0:7:21.07:0,21,764	0/0:16,0:16:48.15:0,48,1610	0/0:17,0:17:45.15:0,45,1572	0/0:32,0:32:76.38:0,76,2687	0/0:29,0:29:69.20:0,69,2581	0/1:15,10:24:99:873,0,224	0/0:24,0:24:72.25:0,72,2489	1/1:0,1:1:3.01:75,3,0
chr10	101940888	.	C	CAAACAAAG	422.95	PASS	AB=1.000;AC=5;AF=0.093;AN=54;BaseQRankSum=4.969;DP=543;FS=0.000;HRun=0;HaplotypeScore=177.1422;InbreedingCoeff=0.6490;MQ=54.81;MQ0=4;MQRankSum=-6.121;QD=6.61;ReadPosRankSum=0.251;VQSLOD=2.6285;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,18:23:2.94:111,3,0	0/0:6,0:6:12.04:0,12,258	0/0:22,0:11:26.45:0,26,453	0/0:7,0:6:8.69:0,9,105	0/0:26,0:26:28.84:0,29,479	0/0:19,0:19:45.14:0,45,999	0/0:15,0:15:30.10:0,30,691	0/0:25,0:25:54.13:0,54,897	0/0:24,0:24:50.54:0,51,1136	0/0:19,0:19:39.12:0,39,759	0/0:7,0:7:18.06:0,18,430	0/0:18,0:18:41.82:0,42,670	0/0:33,0:33:32.99:0,33,594	0/0:18,0:18:50.56:0,51,1088	0/0:12,0:12:33.10:0,33,769	0/0:30,0:30:33.40:0,33,756	0/0:21,0:21:19.82:0,20,666	1/1:16,0:15:16.96:410,17,0	0/0:23,0:23:36.05:0,36,672	0/0:27,0:27:62.81:0,63,1312	0/0:16,0:16:48.13:0,48,1023	0/0:17,0:17:39.13:0,39,862	0/0:16,0:16:39.12:0,39,838	0/0:22,0:22:29.98:0,30,690	0/0:31,0:31:72.19:0,72,1482	0/1:25,0:25:16.03:16,0,577	0/0:24,0:24:54.16:0,54,1181	./.
chr10	101940909	.	CAGGAAGGAAGGA	C	541.12	PASS	AC=4;AF=0.080;AN=50;BaseQRankSum=3.743;DP=471;FS=1.551;HRun=0;HaplotypeScore=179.2380;InbreedingCoeff=0.6907;MQ=55.51;MQ0=4;MQRankSum=-3.878;QD=14.62;ReadPosRankSum=-0.672;VQSLOD=2.7540;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:9.50:0,10,348	0/0:5,0:5:6.02:0,6,279	./.	./.	0/0:17,0:17:27.09:0,27,1493	0/0:15,0:15:15.04:0,15,630	0/0:14,0:14:15.05:0,15,805	0/0:31,0:29:6.02:0,6,162	0/0:21,0:21:27.09:0,27,1375	0/0:22,0:23:45.15:0,45,2289	0/0:8,0:8:9.03:0,9,523	0/0:17,0:17:30.10:0,30,1492	0/0:22,0:22:39.13:0,39,1810	0/0:18,0:18:24.08:0,24,1160	0/0:12,0:12:9.03:0,9,523	0/0:23,0:23:36.11:0,36,1756	0/0:18,0:18:36.12:0,36,1648	1/1:11,6:17:2.06:199,2,0	0/0:17,0:17:18.06:0,18,887	0/0:20,0:21:29.93:0,30,1120	0/0:21,0:21:36.12:0,36,1790	0/0:15,0:15:27.08:0,27,1419	0/0:13,0:13:18.06:0,18,841	0/0:18,0:18:24.06:0,24,1233	0/0:25,0:25:36.11:0,36,1676	1/1:13,7:20:15.03:445,15,0	0/0:23,0:23:39.59:0,40,1917	./.
chr10	101942078	.	GTC	G	1560.35	PASS	AB=0.935;AC=12;AF=0.214;AN=56;BaseQRankSum=9.070;DP=794;FS=21.101;HRun=0;HaplotypeScore=121.3067;InbreedingCoeff=-0.2128;MQ=55.53;MQ0=16;MQRankSum=-0.294;QD=5.53;ReadPosRankSum=-5.031;VQSLOD=0.1807;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:43,1:44:99:215,0,303	0/1:12,0:12:55.36:74,0,55	0/0:20,0:5:5.79:0,6,37	0/1:25,0:6:0.67:1,0,17	0/1:14,1:14:50.51:51,0,57	0/0:34,0:34:83.91:0,84,991	0/0:30,0:30:60.51:0,61,1006	0/0:35,0:34:75.23:0,75,810	0/0:31,0:31:73.70:0,74,1119	0/0:34,0:33:32.58:0,33,948	0/1:13,1:14:20.17:20,0,307	0/1:28,5:33:99:381,0,113	0/1:27,1:28:99:160,0,226	0/0:34,0:34:48.41:0,48,1105	0/0:37,0:35:96.17:0,96,1446	0/1:29,4:33:99:280,0,267	0/0:27,0:26:38.91:0,39,854	0/1:7,4:8:3.84:165,0,4	0/0:22,0:17:23.69:0,24,342	0/0:17,0:17:3.85:0,4,342	0/0:78,1:76:99:0,157,2233	0/0:24,0:23:34.16:0,34,621	0/0:16,0:16:47.99:0,48,584	0/0:49,0:48:99:0,129,1844	0/0:23,0:23:28.29:0,28,529	0/1:33,1:31:99:251,0,129	0/1:17,0:17:5.78:6,0,519	0/1:15,1:16:99:102,0,150
chr10	101942187	.	AGT	A	1768.71	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.541;DP=1057;FS=0.522;HRun=0;HaplotypeScore=133.5795;InbreedingCoeff=0.9381;MQ=54.03;MQ0=28;MQRankSum=0.275;QD=26.80;ReadPosRankSum=0.610;VQSLOD=4.8103;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,37:64:99:1864,144,0	0/0:7,0:7:18.06:0,18,298	0/0:64,0:8:21:0,21,241	0/0:77,0:9:9.45:0,9,211	0/0:27,0:27:57.07:0,57,849	0/0:39,0:38:94.39:0,94,1518	0/0:42,0:42:99:0,102,1610	0/0:61,0:54:99:0,141,2157	0/0:28,0:28:63.15:0,63,1022	0/0:30,0:30:84.27:0,84,1349	0/0:21,0:20:45.15:0,45,755	0/0:33,0:33:87.30:0,87,1458	0/0:27,0:27:78.23:0,78,1217	0/0:39,0:39:93.17:0,93,1503	0/0:34,0:34:90.29:0,90,1477	0/0:25,0:25:74.98:0,75,1208	0/0:38,0:37:93.92:0,94,1504	0/0:19,0:18:28.76:0,29,506	0/0:23,0:16:48.10:0,48,720	0/0:20,0:20:57.18:0,57,923	0/0:118,0:115:99:0,281,4531	0/0:28,0:28:68.94:0,69,1081	0/0:20,0:20:54.13:0,54,874	0/0:59,0:59:99:0,150,2393	0/0:24,0:24:57.18:0,57,897	0/0:44,0:44:99:0,117,1848	0/0:26,0:26:68.53:0,69,1162	0/0:17,0:17:47.37:0,47,757
chr10	101942264	.	GTGTC	G	1857.47	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.081;DP=996;FS=5.682;HRun=0;HaplotypeScore=168.2306;InbreedingCoeff=0.9591;MQ=55.18;MQ0=13;MQRankSum=4.716;QD=23.22;ReadPosRankSum=2.331;VQSLOD=3.3909;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,68:79:99:1952,117,0	0/0:7,0:7:18.06:0,18,443	0/0:41,0:16:22.22:0,22,494	0/0:36,0:19:29.85:0,30,508	0/0:27,0:27:50.09:0,50,1139	0/0:35,0:35:66.20:0,66,1512	0/0:51,0:51:93.24:0,93,2048	0/0:43,1:44:51.45:0,51,1957	0/0:26,0:26:51.14:0,51,1125	0/0:30,0:30:75.25:0,75,1719	0/0:15,0:15:45.11:0,45,1014	0/0:29,0:29:66.23:0,66,1558	0/0:35,0:35:90.19:0,90,1912	0/0:45,0:45:99:0,115,2600	0/0:41,0:41:87.30:0,87,2113	0/0:31,0:31:81.20:0,81,1808	0/0:33,0:32:78.14:0,78,1699	0/0:27,0:27:75.06:0,75,1593	0/0:18,0:16:24.04:0,24,499	0/0:23,0:23:63.20:0,63,1415	0/0:105,0:104:99:0,238,5463	0/0:24,1:25:12.31:0,12,1442	0/0:20,0:20:51.17:0,51,1179	0/0:56,0:56:99:0,126,2876	0/0:36,0:36:84.20:0,84,1908	0/0:34,0:34:81.22:0,81,1656	0/0:23,0:23:48.16:0,48,1196	0/0:22,0:22:39.13:0,39,908
chr10	101942348	.	ATCTG	A	304.31	PASS	AB=0.636;AC=1;AF=0.018;AN=56;BaseQRankSum=3.206;DP=789;FS=2.971;HRun=0;HaplotypeScore=154.1422;InbreedingCoeff=-0.0192;MQ=57.31;MQ0=5;MQRankSum=-0.136;QD=14.49;ReadPosRankSum=1.780;VQSLOD=3.4558;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:52:83.73:0,84,2026	0/0:5,0:5:12.04:0,12,300	0/0:37,0:25:42.14:0,42,968	0/0:31,0:21:36.11:0,36,748	0/0:13,0:13:24.01:0,24,583	0/0:25,0:25:63.22:0,63,1540	0/0:38,0:38:66.23:0,66,1579	0/0:32,0:32:69.24:0,69,1598	0/0:20,0:20:42.14:0,42,1022	0/0:44,0:44:99:0,108,2535	0/0:18,0:18:45.14:0,45,1038	0/0:28,0:28:57.18:0,57,1285	0/0:23,0:24:51.58:0,52,989	0/0:32,0:31:71.83:0,72,1671	0/0:36,0:36:75.25:0,75,1769	0/0:31,0:31:67.09:0,67,1498	0/0:27,0:27:60.68:0,61,1494	0/1:9,12:21:33.83:379,0,34	0/0:33,0:32:60.21:0,60,1360	0/0:24,0:24:60.21:0,60,1374	0/0:59,0:59:99:0,115,2651	0/0:18,0:18:35.73:0,36,884	0/0:15,0:15:27.09:0,27,675	0/0:52,0:52:99:0,123,2958	0/0:21,0:21:33.11:0,33,815	0/0:31,0:30:66.23:0,66,1586	0/0:15,0:15:42.14:0,42,998	0/0:5,0:5:15.05:0,15,379
chr10	101942364	.	G	GGTGT	2072.82	PASS	AB=0.900;AC=16;AF=0.308;AN=52;BaseQRankSum=0.328;DP=801;FS=11.855;HRun=0;HaplotypeScore=166.1783;InbreedingCoeff=0.7116;MQ=55.35;MQ0=16;MQRankSum=-1.881;QD=8.32;ReadPosRankSum=-2.898;VQSLOD=1.7442;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:42,2:48:25.46:450,25,0	1/1:9,2:10:4.83:73,5,0	./.	./.	1/1:15,0:15:12.02:207,12,0	0/0:27,0:28:32.99:0,33,468	0/0:35,0:35:18.08:0,18,331	0/1:37,0:34:20.09:20,0,39	0/0:16,0:20:12:0,12,139	0/0:40,0:40:15.10:0,15,362	0/0:19,0:20:27.08:0,27,402	1/1:19,13:37:21.06:462,21,0	1/1:15,1:29:15.52:244,16,0	0/0:34,0:32:36.12:0,36,560	0/0:32,0:37:44.99:0,45,618	1/1:11,12:29:34.90:600,35,0	0/0:28,0:29:46.48:0,46,575	0/0:16,0:19:21.05:0,21,247	0/0:23,0:20:20.28:0,20,253	0/0:22,0:22:21.07:0,21,319	0/0:63,0:67:33.11:0,33,652	0/0:25,0:26:29.67:0,30,400	0/0:12,0:14:2.50:0,3,154	0/0:48,0:48:53.05:0,53,737	0/0:18,0:20:20.63:0,21,428	0/1:24,0:30:22.89:179,0,23	0/0:19,0:21:21.06:0,21,291	1/1:7,0:7:2.96:19,3,0
chr10	101942512	.	T	TTTTTG	3200.11	PASS	AB=0.853;AC=8;AF=0.143;AN=56;BaseQRankSum=11.681;DP=736;FS=17.142;HRun=0;HaplotypeScore=150.7162;InbreedingCoeff=-0.1649;MQ=61.87;MQ0=4;MQRankSum=-7.789;QD=17.68;ReadPosRankSum=-0.520;VQSLOD=1.7813;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:68.97:0,69,1029	0/1:9,2:11:20.44:246,0,20	0/0:39,0:17:33.16:0,33,425	0/0:33,0:17:8.63:0,9,243	0/1:24,9:33:99:612,0,181	0/0:22,0:22:66.22:0,66,1205	0/0:28,0:28:72.19:0,72,1136	0/0:31,0:31:78:0,78,1006	0/0:23,0:23:69.23:0,69,1199	0/0:33,0:33:87.29:0,87,1480	0/0:27,0:27:81.27:0,81,1411	0/1:19,4:23:90.38:593,0,90	0/1:19,4:23:99:410,0,171	0/0:21,0:21:62.84:0,63,863	0/0:20,0:20:57.18:0,57,985	0/1:7,11:18:20.36:730,0,20	0/0:29,0:29:81.27:0,81,1440	0/1:18,0:18:96.23:206,0,96	0/0:31,0:30:75.17:0,75,1035	0/0:24,0:24:72.24:0,72,1222	0/0:16,0:16:42.14:0,42,693	0/0:36,0:36:93.22:0,93,1577	0/0:25,0:25:69.18:0,69,1142	0/0:33,0:33:93.22:0,93,1537	0/0:31,0:31:81.26:0,81,1445	0/1:38,0:45:99:460,0,293	0/0:26,0:26:78.24:0,78,1266	0/1:10,0:10:78.62:79,0,89
chr10	101942536	.	G	GTTTTTGT	3604.36	PASS	AB=0.925;AC=9;AF=0.161;AN=56;BaseQRankSum=11.760;DP=664;FS=1.420;HRun=0;HaplotypeScore=158.4876;InbreedingCoeff=0.0661;MQ=59.18;MQ0=1;MQRankSum=-9.187;QD=21.45;ReadPosRankSum=2.329;VQSLOD=3.1996;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:68.96:0,69,1194	0/1:15,0:15:99:246,0,165	0/0:28,0:18:26.05:0,26,375	0/0:15,0:7:17.71:0,18,235	0/1:31,0:31:99:478,0,143	0/0:23,0:23:60.17:0,60,1328	0/0:24,0:24:66.08:0,66,1127	0/0:22,0:22:60.02:0,60,736	0/0:26,0:26:69.10:0,69,1132	0/0:32,0:32:81.12:0,81,1415	0/0:28,0:28:75.17:0,75,1484	0/1:23,0:23:82.53:464,0,83	0/1:20,0:21:99:378,0,113	0/0:23,0:23:57.03:0,57,832	0/0:22,0:22:63.05:0,63,1073	0/1:19,0:20:71.37:829,0,71	0/0:28,0:28:78.20:0,78,1645	0/1:5,11:20:0.98:437,0,1	0/0:22,0:21:42.44:0,42,630	0/0:26,0:26:72.10:0,72,1256	0/0:15,0:16:35.11:0,35,635	0/0:34,0:34:93.18:0,93,1792	0/0:22,0:22:60.13:0,60,1155	0/0:29,0:29:81.19:0,81,1601	0/0:25,0:26:78.21:0,78,1595	0/1:35,0:35:99:687,0,146	0/0:19,0:19:48.13:0,48,1050	1/1:3,0:3:0.48:85,0,0
chr10	101943639	.	GGA	G	1091.15	PASS	AB=0.890;AC=25;AF=0.463;AN=54;BaseQRankSum=-2.912;DP=504;FS=8.324;HRun=0;HaplotypeScore=98.7848;InbreedingCoeff=0.3890;MQ=57.32;MQ0=12;MQRankSum=1.977;QD=3.51;ReadPosRankSum=0.825;VQSLOD=1.5808;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:18:0.89:2,1,0	0/0:5,0:6:4.38:0,4,67	./.	0/1:26,0:12:0.03:0,0,0	0/0:14,0:13:12.02:0,12,155	0/1:17,2:18:11.33:144,0,11	1/1:22,2:25:2.11:124,2,0	0/0:13,0:13:3.45:0,3,22	1/1:12,5:17:6.02:66,6,0	0/1:20,0:21:2.01:38,0,2	1/1:15,6:21:17.54:173,18,0	0/0:16,0:16:17.97:0,18,172	0/0:10,0:16:8.99:0,9,78	1/1:20,5:24:14.87:145,15,0	1/1:12,2:11:8.47:95,8,0	0/0:16,0:20:13.73:0,14,127	0/1:13,4:17:26.38:88,0,26	1/1:3,0:5:2.84:14,3,0	0/0:16,0:16:8.93:0,9,65	1/1:14,1:15:5.74:65,6,0	0/0:11,0:15:8.96:0,9,71	0/1:18,0:20:1.03:21,0,1	0/1:7,0:9:14.98:17,0,15	1/1:27,10:37:23.95:259,24,0	0/1:17,0:19:8.19:8,0,21	0/0:19,0:19:19.50:0,19,199	0/0:17,0:20:11.76:0,12,153	0/0:11,0:8:5.92:0,6,39
chr10	101943738	.	ATTC	A	1493.40	PASS	AC=28;AF=0.875;AN=32;BaseQRankSum=0.144;DP=77;FS=25.113;HRun=0;HaplotypeScore=48.0204;InbreedingCoeff=0.4014;MQ=90.72;MQ0=3;MQRankSum=-2.575;QD=29.87;ReadPosRankSum=3.152;VQSLOD=1.7489;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:6.02:104,6,0	./.	0/0:7,0:3:1.48:0,1,4	0/0:7,0:7:14.84:0,15,209	./.	./.	./.	./.	./.	1/1:0,2:2:6.02:106,6,0	./.	1/1:0,4:4:6.02:106,6,0	1/1:0,5:5:6.02:90,6,0	1/1:0,8:8:15.05:244,15,0	1/1:0,5:5:6.02:106,6,0	1/1:0,1:1:3.01:49,3,0	./.	1/1:0,2:2:6.02:106,6,0	1/1:0,3:3:9.03:159,9,0	./.	./.	./.	1/1:0,4:4:6.02:102,6,0	1/1:0,4:4:0.47:1,0,0	1/1:0,1:1:3.01:49,3,0	1/1:0,5:5:15.05:264,15,0	1/1:0,3:3:6.02:106,6,0	./.
chr10	101943754	.	AT	A	600.69	PASS	AB=0.500;AC=22;AF=0.733;AN=30;BaseQRankSum=1.959;DP=85;FS=19.382;HRun=1;HaplotypeScore=48.2888;InbreedingCoeff=0.3977;MQ=77.00;MQ0=15;MQRankSum=-3.369;QD=13.06;ReadPosRankSum=1.489;VQSLOD=0.9362;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:3.01:35,3,0	./.	0/0:10,0:2:3.85:0,4,22	0/0:11,0:5:8.71:0,9,88	./.	./.	./.	./.	./.	1/1:0,2:2:6.02:84,6,0	./.	1/1:0,4:4:3.01:37,3,0	1/1:0,5:5:3.01:42,3,0	1/1:0,8:8:3.01:42,3,0	./.	0/1:0,1:1:0:0,0,0	./.	1/1:0,2:2:6.02:78,6,0	1/1:1,3:3:9.03:126,9,0	./.	./.	./.	0/1:0,4:4:0:0,0,0	0/1:0,4:4:0:0,0,0	0/1:0,1:1:0:0,0,0	1/1:0,5:5:15.05:209,15,0	1/1:0,3:3:3.01:42,3,0	./.
chr10	101944034	.	GGA	G	282.46	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.179;DP=597;FS=9.787;HRun=0;HaplotypeScore=119.6270;InbreedingCoeff=0.9272;MQ=55.36;MQ0=14;MQRankSum=-1.811;QD=16.62;ReadPosRankSum=-3.125;VQSLOD=2.1225;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,12:15:28.84:377,29,0	0/0:9,0:9:24.05:0,24,378	0/0:38,0:10:15.37:0,15,190	0/0:66,0:26:20.50:0,20,464	0/0:18,0:18:45.15:0,45,767	0/0:26,0:26:57.64:0,58,919	0/0:27,0:27:15.39:0,15,810	0/0:15,0:13:33.11:0,33,533	0/0:15,0:15:39.06:0,39,611	0/0:31,0:31:68.48:0,68,1017	0/0:12,0:12:30.09:0,30,493	0/0:15,0:15:27.95:0,28,420	0/0:25,0:22:51.06:0,51,817	0/0:22,0:22:48.16:0,48,791	0/0:20,0:19:38.90:0,39,667	0/0:19,0:18:24.08:0,24,414	0/0:20,0:20:42.14:0,42,717	0/0:5,0:5:12.51:0,13,209	0/0:16,0:14:39.13:0,39,672	0/0:16,0:16:24.51:0,25,385	0/0:36,0:35:74.91:0,75,1187	0/0:22,0:22:48.62:0,49,829	0/0:21,0:21:37.94:0,38,606	0/0:22,0:21:45.14:0,45,723	0/0:20,0:20:32.51:0,33,630	0/0:17,0:12:30.01:0,30,435	0/0:16,0:15:35.17:0,35,456	0/0:11,0:9:18.53:0,19,312
chr10	101944071	.	A	AGGGGGAG	445.71	PASS	AB=0.893;AC=5;AF=0.089;AN=56;BaseQRankSum=2.041;DP=507;FS=3.690;HRun=0;HaplotypeScore=139.9237;InbreedingCoeff=0.2167;MQ=54.62;MQ0=22;MQRankSum=-2.491;QD=7.68;ReadPosRankSum=-1.711;VQSLOD=2.3188;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:14:2.84:14,3,0	0/0:6,0:5:10.52:0,11,155	0/0:24,0:6:15.24:0,15,241	0/0:44,0:11:16.18:0,16,127	0/0:16,0:15:15.52:0,16,346	0/0:22,0:22:54.16:0,54,1310	0/0:16,0:16:36.05:0,36,732	0/0:27,0:24:60.14:0,60,1305	0/0:18,0:18:38.98:0,39,873	0/0:23,0:22:63.15:0,63,1394	0/0:13,0:12:26.91:0,27,639	0/0:13,0:13:8.57:0,9,370	0/0:17,0:14:41.97:0,42,905	0/0:23,0:21:44.60:0,45,1040	0/0:23,0:23:45.46:0,45,1141	0/1:15,0:15:7.96:8,0,82	0/0:23,0:23:57.20:0,57,1459	0/0:4,0:3:9.03:0,9,214	0/0:12,0:11:24.07:0,24,440	0/0:17,0:17:29.81:0,30,667	0/0:33,0:33:72.24:0,72,1753	0/0:15,0:15:42:0,42,939	0/0:13,0:13:26.95:0,27,638	0/0:19,0:17:42.10:0,42,1004	0/0:14,0:14:22.38:0,22,601	0/1:9,4:14:99:317,0,110	0/0:13,0:13:30.10:0,30,722	0/1:10,0:8:11.40:213,0,11
chr10	101944074	.	GAGAGAGAA	G	732.88	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=2.546;DP=499;FS=0.000;HRun=0;HaplotypeScore=127.7705;InbreedingCoeff=0.6491;MQ=55.07;MQ0=22;MQRankSum=0.121;QD=6.37;ReadPosRankSum=0.260;VQSLOD=2.2726;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:14:5.90:37,6,0	1/1:7,0:6:11.95:94,12,0	0/0:20,0:6:0.80:0,1,34	0/0:38,0:7:3.61:0,4,33	1/1:15,1:15:11.45:97,11,0	0/0:22,0:22:44.09:0,44,1127	0/0:14,0:14:22.29:0,22,498	0/0:27,0:24:51.79:0,52,680	0/0:16,0:16:34.96:0,35,783	0/0:24,0:23:66.09:0,66,1278	0/0:13,0:12:8.05:0,8,688	1/1:14,0:14:17.89:135,18,0	1/1:18,0:15:35.73:263,36,0	0/0:22,0:20:47.80:0,48,979	0/0:24,0:24:40.44:0,40,1444	1/1:2,13:15:3.01:81,3,0	0/0:23,0:23:54.96:0,55,1746	1/1:4,0:3:6.01:79,6,0	0/0:11,0:10:23.72:0,24,430	0/0:18,0:18:38.01:0,38,626	0/0:31,0:31:21.47:0,21,1814	0/0:16,0:16:18.68:0,19,637	0/0:14,0:14:27.87:0,28,515	0/0:22,0:20:47.79:0,48,1085	0/0:14,0:14:21.02:0,21,293	0/1:15,0:12:80.28:93,0,80	0/0:14,0:14:4.94:0,5,723	0/1:10,0:8:26.77:32,0,27
chr10	101944438	.	T	TA	4207.23	PASS	AB=0.545;AC=9;AF=0.161;AN=56;BaseQRankSum=12.829;DP=660;FS=3.634;HRun=0;HaplotypeScore=91.0859;InbreedingCoeff=0.8765;MQ=87.40;MQ0=0;MQRankSum=-13.238;QD=42.93;ReadPosRankSum=0.013;VQSLOD=3.8177;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,1764	1/1:1,8:9:26.98:372,27,0	0/0:20,0:20:60.04:0,60,758	0/0:29,0:29:68.39:0,68,877	1/1:3,24:27:75.14:1114,75,0	0/0:20,0:20:60.19:0,60,823	0/0:25,0:25:75.23:0,75,1016	0/0:33,0:33:96.30:0,96,1299	0/0:28,0:28:84.28:0,84,1171	0/0:24,0:24:72.24:0,72,1007	0/0:15,0:15:45.09:0,45,591	1/1:0,20:20:60.14:914,60,0	0/1:4,20:24:11.61:951,0,12	0/0:14,0:14:42.14:0,42,586	0/0:27,0:27:78.26:0,78,1090	1/1:0,18:18:54.18:856,54,0	0/0:26,0:26:78.25:0,78,1074	0/0:21,0:21:63.19:0,63,861	0/0:26,0:26:78.23:0,78,1043	0/0:31,0:31:93.30:0,93,1280	0/0:26,0:26:75.23:0,75,1030	0/0:19,0:19:57.17:0,57,764	0/0:22,0:22:63.19:0,63,860	0/0:33,0:33:96.32:0,96,1341	0/0:20,0:20:60.18:0,60,805	0/0:22,0:22:66.21:0,66,894	0/0:24,0:24:72.24:0,72,1005	0/0:12,0:12:36.12:0,36,493
chr10	101944449	.	T	TG	7204.34	PASS	AB=0.548;AC=17;AF=0.304;AN=56;BaseQRankSum=-0.385;DP=664;FS=1.031;HRun=3;HaplotypeScore=82.6053;InbreedingCoeff=0.9331;MQ=89.02;MQ0=0;MQRankSum=-7.238;QD=36.57;ReadPosRankSum=1.048;VQSLOD=5.2194;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,43:45:99:1680,120,0	1/1:1,7:8:24.08:335,24,0	0/0:23,0:23:60.17:0,60,704	0/0:30,0:30:77.80:0,78,832	1/1:2,31:33:84.21:1144,84,0	0/0:21,0:21:60.18:0,60,720	0/0:26,0:26:69.20:0,69,818	0/0:32,0:32:90.24:0,90,1049	0/0:26,0:26:75.21:0,75,886	0/0:24,0:24:66.20:0,66,792	0/0:17,0:17:51.14:0,51,598	1/1:0,17:17:51.17:712,51,0	0/1:4,19:23:5.77:768,0,6	0/0:14,0:14:39.12:0,39,468	0/0:22,0:22:66.20:0,66,792	1/1:1,18:19:51.17:712,51,0	0/0:26,0:26:72.19:0,72,849	1/1:3,15:18:45.15:630,45,0	0/0:27,0:27:72.22:0,72,864	0/0:33,0:33:96.29:0,96,1149	0/0:27,0:27:75.21:0,75,886	0/0:19,0:19:54.16:0,54,639	0/0:20,0:20:57.17:0,57,684	0/0:34,0:34:96.29:0,96,1151	0/0:20,0:20:54.17:0,54,648	1/1:1,20:21:27.20:804,27,0	0/0:26,0:26:75.21:0,75,887	1/1:3,10:13:30.10:420,30,0
chr10	101944620	.	ATT	A	2316.74	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.265;DP=607;FS=0.460;HRun=10;HaplotypeScore=77.8284;InbreedingCoeff=0.9939;MQ=65.96;MQ0=1;MQRankSum=-2.256;QD=24.65;ReadPosRankSum=1.860;VQSLOD=3.5054;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:29:54.08:0,54,511	1/1:2,6:8:15.03:167,15,0	0/0:13,0:11:23.34:0,23,276	0/0:11,0:10:24.48:0,24,288	1/1:3,28:31:81.20:901,81,0	0/0:28,0:28:75.26:0,75,1190	0/0:16,0:17:48.11:0,48,653	0/0:33,0:33:72.23:0,72,1094	0/0:26,0:26:69.23:0,69,1061	0/0:27,0:27:60.20:0,60,931	0/0:26,0:27:77.69:0,78,1091	1/1:3,16:19:45.05:484,45,0	1/1:2,17:19:51.07:553,51,0	0/0:17,0:17:48.13:0,48,690	0/0:15,0:15:42.08:0,42,596	1/1:1,16:16:36.03:385,36,0	0/0:24,0:26:69.23:0,69,1075	0/0:17,0:17:39.09:0,39,571	0/0:24,0:26:60.14:0,60,862	0/0:39,0:39:99:0,111,1705	0/0:9,0:9:21.06:0,21,313	0/0:15,0:15:33.07:0,33,452	0/0:30,0:30:83.73:0,84,1256	0/0:12,0:12:29.58:0,30,416	0/0:18,0:18:51.17:0,51,809	0/0:35,0:35:87.23:0,87,1251	0/0:33,0:34:99:0,99,1503	0/0:9,0:9:27.09:0,27,429
chr10	101945161	.	G	GA	2324.08	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=3.930;DP=653;FS=21.895;HRun=8;HaplotypeScore=79.8070;InbreedingCoeff=0.9987;MQ=80.48;MQ0=0;MQRankSum=-8.551;QD=27.34;ReadPosRankSum=1.126;VQSLOD=2.2378;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:96.02:0,96,871	1/1:3,6:9:20.99:215,21,0	0/0:23,0:25:38.30:0,38,337	0/0:25,0:24:40.20:0,40,359	1/1:2,13:15:45.05:488,45,0	0/0:23,0:23:44.14:0,44,530	0/0:28,0:28:72.01:0,72,651	0/0:28,0:28:68.98:0,69,614	0/0:20,0:20:60.03:0,60,549	0/0:25,0:25:69.03:0,69,631	0/0:19,0:19:53.99:0,54,487	1/1:3,16:19:45.13:519,45,0	1/1:2,18:20:57.17:657,57,0	0/0:24,0:24:72.04:0,72,659	0/0:36,0:36:99:0,102,934	1/1:3,19:22:54.16:621,54,0	0/0:25,0:25:72:0,72,647	0/0:24,0:24:63.03:0,63,577	0/0:25,0:25:56.98:0,57,510	0/0:22,0:22:57.02:0,57,522	0/0:23,0:23:62.04:0,62,550	0/0:21,0:21:57.03:0,57,522	0/0:20,0:20:48.02:0,48,439	0/0:34,0:34:89.97:0,90,804	0/0:15,0:15:42.02:0,42,384	0/0:21,0:21:57.03:0,57,519	0/0:37,0:36:96.04:0,96,874	0/0:14,0:14:27.01:0,27,247
chr10	101945202	.	C	CCTCTT	4812.68	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.872;DP=620;FS=14.122;HRun=0;HaplotypeScore=133.0875;InbreedingCoeff=0.9684;MQ=77.52;MQ0=0;MQRankSum=-11.495;QD=64.17;ReadPosRankSum=-1.431;VQSLOD=5.1406;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:99:0,141,2959	1/1:1,3:4:12.04:324,12,0	0/0:17,0:17:30.36:0,30,660	0/0:14,0:14:27.02:0,27,477	1/1:4,12:16:42.04:921,42,0	0/0:14,0:14:39.13:0,39,831	0/0:17,0:17:51.16:0,51,1067	0/0:28,0:27:78.27:0,78,1694	0/0:21,0:21:60.21:0,60,1303	0/0:25,0:25:72.25:0,72,1546	0/0:22,0:22:57.18:0,57,1198	1/1:7,7:14:39.10:908,39,0	1/1:5,15:21:54.19:1422,54,0	0/0:27,0:27:78.27:0,78,1658	0/0:30,0:30:87.30:0,87,1859	1/1:7,13:20:54.17:1239,54,0	0/0:27,0:27:81.25:0,81,1679	0/0:22,0:22:63.22:0,63,1367	0/0:27,0:26:75.25:0,75,1559	0/0:24,0:24:66.21:0,66,1358	0/0:24,0:24:69.24:0,69,1467	0/0:23,0:23:66.23:0,66,1416	0/0:19,0:19:54.15:0,54,1172	0/0:35,0:35:99:0,102,2198	0/0:22,0:22:60.21:0,60,1303	0/0:23,0:23:69.24:0,69,1498	0/0:33,0:32:93.32:0,93,2017	0/0:3,0:3:6.02:0,6,105
chr10	101945206	.	AT	A	1309.79	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.482;DP=607;FS=14.119;HRun=1;HaplotypeScore=84.6624;InbreedingCoeff=0.9719;MQ=81.15;MQ0=0;MQRankSum=-10.284;QD=22.20;ReadPosRankSum=0.337;VQSLOD=2.4329;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:99:0,144,2244	1/1:0,3:3:9:77,9,0	0/0:20,0:20:55:0,55,717	0/0:12,1:13:26.58:0,27,388	1/1:1,13:14:35.51:296,36,0	0/0:15,0:15:45.15:0,45,719	0/0:16,0:16:48.16:0,48,767	0/0:28,0:27:84.29:0,84,1342	0/0:22,0:22:66.21:0,66,1032	0/0:27,0:27:81.26:0,81,1254	0/0:21,0:21:60.19:0,60,936	1/1:1,7:8:23.99:205,24,0	1/1:2,16:18:53.85:454,54,0	0/0:28,0:28:84.26:0,84,1316	0/0:29,0:29:87.28:0,87,1368	1/1:0,16:16:48.01:449,48,0	0/0:28,0:28:84.29:0,84,1343	0/0:21,0:21:63.21:0,63,1003	0/0:27,0:26:81.28:0,81,1290	0/0:22,0:22:63.18:0,63,960	0/0:23,0:23:69.22:0,69,1080	0/0:25,0:25:75.24:0,75,1171	0/0:20,0:20:57.16:0,57,911	0/0:34,0:34:99:0,102,1631	0/0:22,0:22:66.23:0,66,1054	0/0:23,0:23:69.24:0,69,1102	0/0:32,0:31:96.31:0,96,1511	0/0:4,0:4:8.99:0,9,116
chr10	101945493	.	A	ATCTC	3129.89	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-3.299;DP=551;FS=5.743;HRun=0;HaplotypeScore=97.7032;InbreedingCoeff=0.9436;MQ=88.03;MQ0=0;MQRankSum=-7.957;QD=51.31;ReadPosRankSum=1.964;VQSLOD=4.8060;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:33.11:0,33,583	1/1:2,3:5:9.03:235,9,0	0/0:23,0:22:55.02:0,55,953	0/0:24,0:23:60.17:0,60,1054	1/1:0,11:13:18.06:456,18,0	0/0:24,0:24:66.22:0,66,1149	0/0:28,0:28:69.24:0,69,1240	0/0:22,0:21:57.18:0,57,979	0/0:18,0:18:45.15:0,45,812	0/0:27,0:27:75.26:0,75,1350	0/0:22,0:22:54.18:0,54,971	1/1:2,13:15:39.13:1003,39,0	1/1:3,10:13:30.10:743,30,0	0/0:25,0:25:72.25:0,72,1292	0/0:30,0:30:75.26:0,75,1348	1/1:3,11:15:33.11:863,33,0	0/0:39,0:39:99:0,117,2115	0/0:8,0:8:21.07:0,21,382	0/0:17,0:17:45.14:0,45,767	0/0:24,0:24:60.04:0,60,1082	0/0:10,0:10:30.10:0,30,536	0/0:34,0:34:84.29:0,84,1513	0/0:23,0:23:60.21:0,60,1065	0/0:25,0:25:69.24:0,69,1227	0/0:17,0:17:45.15:0,45,818	0/0:12,0:12:33.11:0,33,600	0/0:22,0:22:66.20:0,66,1154	0/0:3,0:3:3.01:0,3,55
chr10	101945555	.	C	CTGTGCCTGGT	1381.13	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.573;DP=604;FS=21.548;HRun=0;HaplotypeScore=180.3047;InbreedingCoeff=0.9637;MQ=80.12;MQ0=0;MQRankSum=-3.194;QD=65.77;ReadPosRankSum=-1.589;VQSLOD=1.6583;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,6:21:36.12:1476,36,0	0/0:6,0:6:18.06:0,18,506	0/0:26,0:26:45.15:0,45,1355	0/0:13,0:13:18.06:0,18,510	0/0:20,0:20:36.12:0,36,1054	0/0:23,0:23:63.20:0,63,1866	0/0:19,0:19:45.15:0,45,1313	0/0:29,0:29:63.19:0,63,1608	0/0:16,0:16:33.11:0,33,967	0/0:30,0:30:66.23:0,66,2045	0/0:32,0:32:66.23:0,66,1960	0/0:15,0:15:24.08:0,24,746	0/0:11,0:11:18.06:0,18,525	0/0:22,0:22:57.20:0,57,1731	0/0:25,0:25:66.23:0,66,2052	0/0:16,0:16:24.08:0,24,741	0/0:47,0:47:99:0,117,3457	0/0:9,0:9:27.09:0,27,830	0/0:19,0:19:42.14:0,42,1237	0/0:19,0:19:51.13:0,51,1421	0/0:23,0:23:54.19:0,54,1592	0/0:33,0:33:84.28:0,84,2422	0/0:26,0:26:60.21:0,60,1709	0/0:33,0:33:87.30:0,87,2542	0/0:19,0:19:51.13:0,51,1487	0/0:20,0:20:48.16:0,48,1499	0/0:26,0:26:66.23:0,66,1985	0/0:6,0:6:18.06:0,18,563
chr10	101945597	.	ATC	A	3790.83	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.592;DP=567;FS=4.412;HRun=0;HaplotypeScore=68.9371;InbreedingCoeff=0.9982;MQ=79.91;MQ0=1;MQRankSum=-5.923;QD=31.33;ReadPosRankSum=1.258;VQSLOD=5.6046;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:42.14:559,42,0	1/1:0,8:8:24.08:317,24,0	0/0:21,0:20:50.84:0,51,840	0/0:22,0:21:49.02:0,49,785	1/1:1,19:20:45.15:599,45,0	0/0:26,0:26:75.24:0,75,1271	0/0:14,0:14:36.12:0,36,611	0/0:26,0:26:69.21:0,69,1134	0/0:15,0:15:39.13:0,39,675	0/0:18,0:18:51.17:0,51,881	0/0:27,0:27:57.20:0,57,986	1/1:2,9:10:21.07:280,21,0	1/1:1,11:12:24.08:319,24,0	0/0:27,0:27:78.24:0,78,1296	0/0:19,0:19:48.15:0,48,804	1/1:1,11:12:27.09:360,27,0	0/0:42,0:42:99:0,120,2064	1/1:1,9:10:27.09:360,27,0	0/0:19,0:19:42.14:0,42,725	0/0:23,0:23:63.22:0,63,1090	0/0:16,0:16:45.15:0,45,775	0/0:18,0:18:39.13:0,39,675	0/0:23,0:23:63.22:0,63,1091	0/0:26,0:26:66.23:0,66,1134	0/0:31,0:31:87.28:0,87,1477	1/1:4,16:20:48.16:639,48,0	0/0:33,0:33:93.32:0,93,1596	1/1:0,9:9:27.09:359,27,0
chr10	101945763	.	G	GTC	1907.55	PASS	AB=0.594;AC=8;AF=0.143;AN=56;BaseQRankSum=6.197;DP=830;FS=3.547;HRun=0;HaplotypeScore=134.8359;InbreedingCoeff=0.7169;MQ=58.03;MQ0=18;MQRankSum=-2.471;QD=18.00;ReadPosRankSum=1.395;VQSLOD=3.7319;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:35.89:0,36,363	1/1:2,6:8:16.61:240,17,0	0/0:44,0:18:17.32:0,17,236	0/0:87,0:29:4.40:0,4,75	0/1:8,19:25:4.68:465,0,5	0/0:20,0:20:43.95:0,44,505	0/0:31,0:29:60.19:0,60,757	0/0:52,0:52:99:0,120,1414	0/0:20,0:20:54.16:0,54,669	0/0:35,0:35:86.98:0,87,1027	0/0:24,0:24:47.12:0,47,542	1/1:7,11:17:21:316,21,0	1/1:13,16:26:37.90:532,38,0	0/0:34,0:33:84.25:0,84,1035	0/0:28,0:28:72.13:0,72,858	0/1:8,15:23:17.31:507,0,17	0/0:21,0:21:51.16:0,51,643	0/0:28,0:28:62.01:0,62,789	0/0:22,0:18:45.13:0,45,553	0/0:25,0:25:45.52:0,46,704	0/0:39,0:38:99:0,102,1273	0/0:25,0:25:57.08:0,57,669	0/0:22,0:22:45.10:0,45,536	0/0:43,0:43:99:0,111,1387	0/0:23,0:23:50.99:0,51,583	0/0:4,0:27:62.48:0,62,338	0/0:34,0:33:55.16:0,55,978	0/0:2,0:12:22.58:0,23,110
chr10	101945803	.	G	GTCTC	1849.84	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=8.113;DP=713;FS=6.477;HRun=0;HaplotypeScore=134.0640;InbreedingCoeff=0.8793;MQ=49.73;MQ0=34;MQRankSum=0.442;QD=18.69;ReadPosRankSum=0.173;VQSLOD=3.1588;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:11:0.11:0,0,0	1/1:4,4:7:12.02:266,12,0	0/0:8,0:2:2.74:0,3,12	0/0:22,0:6:5.37:0,5,33	1/1:17,4:18:15.01:257,15,0	0/0:25,0:25:57.13:0,57,966	0/0:27,0:25:66.16:0,66,1149	0/0:47,0:32:84.10:0,84,1254	0/0:25,0:25:65.93:0,66,1127	0/0:31,0:30:49.46:0,49,1406	0/0:19,0:19:38.14:0,38,774	1/1:7,10:16:24.05:516,24,0	1/1:5,13:17:12.58:173,13,0	0/0:26,0:25:72.12:0,72,1203	0/0:35,0:35:93.22:0,93,1644	1/1:4,14:17:30.10:804,30,0	0/0:20,0:20:54.15:0,54,966	0/0:26,0:24:12.51:0,13,694	0/0:30,0:22:66.07:0,66,1008	0/0:24,0:24:65.46:0,65,1170	0/0:49,0:47:99:0,126,2266	0/0:33,0:33:60.02:0,60,918	0/0:25,0:23:30.09:0,30,519	0/0:40,0:40:99:0,109,1816	0/0:11,0:11:27.05:0,27,480	0/0:34,0:33:93.29:0,93,1667	0/0:35,0:34:90.16:0,90,1497	0/0:20,0:20:51.05:0,51,824
chr10	101945827	.	G	GTC	184.51	PASS	AB=0.910;AC=3;AF=0.058;AN=52;BaseQRankSum=5.582;DP=748;FS=0.000;HRun=0;HaplotypeScore=119.1885;InbreedingCoeff=-0.0620;MQ=48.95;MQ0=50;MQRankSum=-1.530;QD=3.29;ReadPosRankSum=-1.443;VQSLOD=1.8058;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:18:15.05:0,15,203	0/0:6,0:5:5.09:0,5,117	./.	./.	0/1:13,0:11:35.20:40,0,35	0/0:20,0:19:39.13:0,39,534	0/0:31,0:28:51.12:0,51,650	0/0:59,0:33:78.22:0,78,1016	0/0:32,0:32:87.25:0,87,1158	0/0:36,0:34:57.32:0,57,1126	0/0:25,0:22:54.09:0,54,714	0/1:16,0:14:1.31:1,0,224	0/0:14,0:12:6:0,6,78	0/0:27,0:26:78.24:0,78,1046	0/0:40,0:39:93.29:0,93,1258	0/0:19,0:15:27.05:0,27,342	0/0:18,0:18:45.15:0,45,614	0/1:17,10:25:99:232,0,207	0/0:33,0:17:39.13:0,39,531	0/0:27,0:27:74.41:0,74,991	0/0:52,0:50:99:0,115,1486	0/0:31,0:31:54.16:0,54,720	0/0:33,0:31:48.13:0,48,624	0/0:52,0:51:99:0,108,1461	0/0:16,0:16:36.12:0,36,493	0/0:44,0:42:99:0,111,1486	0/0:27,0:26:72.22:0,72,967	0/0:21,0:21:45.15:0,45,611
chr10	101945979	.	G	GTC	684.87	PASS	AB=0.784;AC=4;AF=0.077;AN=52;BaseQRankSum=-2.213;DP=772;FS=0.870;HRun=0;HaplotypeScore=111.1675;InbreedingCoeff=0.2088;MQ=47.43;MQ0=55;MQRankSum=-5.288;QD=7.96;ReadPosRankSum=-4.273;VQSLOD=2.7300;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:22:0.47:1,0,0	0/0:3,0:3:0:0,0,0	./.	./.	0/0:16,0:15:6.02:0,6,82	0/0:27,0:27:65.89:0,66,873	0/0:42,0:40:87.29:0,87,1186	0/0:58,0:11:24.03:0,24,269	0/0:34,0:32:93.28:0,93,1235	0/0:43,0:40:99:0,108,1386	0/0:31,0:29:60.66:0,61,807	0/0:9,2:7:3.01:0,3,41	0/0:16,0:13:15.05:0,15,203	0/0:23,0:22:57.19:0,57,781	0/0:35,0:34:90.24:0,90,1165	0/0:9,1:8:4.20:0,4,22	0/0:25,0:25:56.01:0,56,691	0/0:27,0:25:54.82:0,55,772	0/0:38,0:10:27.07:0,27,339	0/0:27,0:25:54.15:0,54,706	0/0:45,0:40:89.54:0,90,1115	0/0:39,0:37:84.21:0,84,1082	0/0:25,0:24:57.19:0,57,774	0/0:51,0:52:99:0,117,1597	0/0:22,0:21:54.16:0,54,721	0/1:30,16:45:99:693,0,803	0/0:28,0:27:72.22:0,72,969	0/1:8,2:9:79.31:79,0,252
chr10	101946009	.	GTC	G	234.52	PASS	AB=0.910;AC=5;AF=0.089;AN=56;BaseQRankSum=4.822;DP=712;FS=1.254;HRun=0;HaplotypeScore=91.1175;InbreedingCoeff=0.1986;MQ=47.83;MQ0=44;MQRankSum=-4.960;QD=3.26;ReadPosRankSum=0.689;VQSLOD=2.0359;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,4:20:14.84:0,15,253	0/0:4,0:4:0:0,0,0	0/0:9,1:1:2.90:0,3,16	0/0:25,0:2:2.80:0,3,13	0/0:13,0:12:6.02:0,6,104	0/0:22,0:22:48.15:0,48,776	0/0:32,0:31:69.19:0,69,1109	0/0:57,0:18:51.17:0,51,835	0/0:35,0:35:84.25:0,84,1404	0/0:35,0:34:96.24:0,96,1623	0/0:29,0:29:57.16:0,57,916	0/0:9,0:6:3.01:0,3,52	0/1:14,0:11:0.06:0,0,221	0/0:22,0:22:57.18:0,57,945	0/0:34,0:34:90.27:0,90,1453	1/1:10,0:8:1.82:5,2,0	0/0:24,0:25:48.13:0,48,801	0/0:27,0:26:64.05:0,64,1008	0/0:24,0:10:24.08:0,24,413	0/0:19,0:18:42.12:0,42,661	0/0:40,0:37:84.01:0,84,1337	0/0:31,0:29:72.03:0,72,1197	0/0:24,0:23:45.14:0,45,730	0/0:43,0:43:90.29:0,90,1495	0/0:27,0:24:63.22:0,63,1086	0/1:34,7:41:99:294,0,1135	0/0:27,0:27:75.20:0,75,1235	0/1:5,1:7:27.27:27,0,112
chr10	101946091	.	CTG	C	310.28	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=7.385;DP=745;FS=0.743;HRun=0;HaplotypeScore=103.5724;InbreedingCoeff=0.5865;MQ=44.77;MQ0=95;MQRankSum=0.126;QD=3.37;ReadPosRankSum=-1.766;VQSLOD=2.0702;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,1:31:50.96:0,51,696	1/1:5,0:5:8.67:60,9,0	0/0:25,0:1:3.01:0,3,37	0/0:36,0:1:3.01:0,3,58	1/1:12,1:13:9:95,9,0	0/0:20,0:20:43.98:0,44,847	0/0:33,0:27:47.85:0,48,913	0/0:46,0:24:72.25:0,72,1360	0/0:28,0:25:63.03:0,63,1139	0/0:36,0:26:72.25:0,72,1330	0/0:22,0:22:45.15:0,45,861	1/1:9,1:9:4.60:89,5,0	1/1:15,0:13:17.15:126,17,0	0/0:25,2:25:30.06:0,30,1033	0/0:37,0:35:87.14:0,87,1616	0/1:11,0:10:73.39:82,0,73	0/0:30,0:28:59.41:0,59,986	0/1:31,0:27:6.33:6,0,763	0/0:26,0:14:35.94:0,36,650	0/0:32,0:31:60.19:0,60,1122	0/0:44,0:40:68.89:0,69,1201	0/0:31,0:26:36.05:0,36,848	0/0:15,0:15:24.08:0,24,461	0/0:38,0:35:54.03:0,54,927	0/0:27,0:22:54.15:0,54,953	0/0:27,0:20:46.43:0,46,579	0/0:32,1:32:66.48:0,66,1153	0/1:7,0:5:0.72:1,0,33
chr10	101946105	.	GTCTCTC	G	712.99	PASS	AB=0.963;AC=15;AF=0.300;AN=50;BaseQRankSum=5.663;DP=790;FS=3.584;HRun=0;HaplotypeScore=169.0829;InbreedingCoeff=0.1728;MQ=46.61;MQ0=66;MQRankSum=-0.171;QD=2.39;ReadPosRankSum=0.671;VQSLOD=2.8017;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:36:27:0,27,349	0/1:5,0:5:5.99:8,0,6	./.	./.	1/1:16,0:17:5.27:24,5,0	0/0:24,0:23:33.03:0,33,603	0/0:27,0:27:31.67:0,32,442	0/0:43,0:26:0.89:0,1,2	0/0:36,0:33:44.87:0,45,727	0/0:41,0:36:47.93:0,48,620	0/0:27,0:27:9:0,9,146	0/1:14,0:13:12.54:46,0,13	./.	0/0:25,0:22:36.08:0,36,695	0/1:33,2:38:37.65:38,0,187	0/1:21,0:20:9.43:41,0,9	0/0:35,0:35:45.26:0,45,784	0/1:29,0:25:1.88:175,0,2	1/1:17,3:14:8.91:125,9,0	0/1:31,7:37:8.21:16,0,8	0/1:43,0:39:30.48:30,0,51	0/0:30,0:29:24:0,24,307	0/0:26,0:25:22.54:0,23,221	0/0:26,0:40:20.96:0,21,451	0/0:32,0:30:36.06:0,36,521	0/1:30,0:24:12.59:84,0,13	1/1:26,7:32:3.72:208,4,0	0/1:7,0:5:14.97:69,0,15
chr10	101947110	.	CCTTA	C	4694.04	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.789;DP=669;FS=7.991;HRun=0;HaplotypeScore=119.4194;InbreedingCoeff=0.9944;MQ=89.22;MQ0=0;MQRankSum=-2.437;QD=44.71;ReadPosRankSum=2.472;VQSLOD=5.4949;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,3293	1/1:0,6:6:15.05:280,15,0	0/0:18,0:18:45.11:0,45,949	0/0:34,0:34:90.31:0,90,2168	1/1:1,14:15:36.12:670,36,0	0/0:22,0:22:63.22:0,63,1653	0/0:26,0:26:75.26:0,75,1977	0/0:33,0:33:87.30:0,87,2285	0/0:31,0:31:90.29:0,90,2304	0/0:26,0:26:69.19:0,69,1769	0/0:14,0:14:39.13:0,39,1040	1/1:5,29:34:78.27:1454,78,0	1/1:4,29:33:84.29:1563,84,0	0/0:31,0:31:90.30:0,90,2330	0/0:31,0:31:84.29:0,84,2240	1/1:0,17:17:39.13:727,39,0	0/0:27,0:27:81.28:0,81,2160	0/0:20,0:20:60.18:0,60,1521	0/0:18,0:18:51.18:0,51,1335	0/0:24,0:24:69.22:0,69,1771	0/0:30,0:30:78.25:0,78,2025	0/0:22,0:22:63.22:0,63,1637	0/0:17,0:17:48.11:0,48,1110	0/0:34,0:34:99:0,99,2519	0/0:18,0:18:54.19:0,54,1440	0/0:24,0:24:66.23:0,66,1744	0/0:15,0:15:45.13:0,45,1143	0/0:6,0:6:18.06:0,18,480
chr10	101947303	.	C	CT	4992.14	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-8.798;DP=604;FS=0.000;HRun=8;HaplotypeScore=61.0974;InbreedingCoeff=0.9054;MQ=74.82;MQ0=0;MQRankSum=-2.382;QD=26.84;ReadPosRankSum=0.434;VQSLOD=5.3759;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,28:32:81.24:935,81,0	1/1:4,10:14:30.09:346,30,0	0/1:11,0:11:19.44:19,0,139	0/0:14,0:15:24.98:0,25,276	1/1:3,25:28:75.22:866,75,0	0/0:24,0:24:60.02:0,60,549	0/0:19,0:19:45.01:0,45,412	0/0:30,0:30:75:0,75,683	0/0:15,0:15:42.02:0,42,384	0/0:34,0:34:87.01:0,87,789	0/0:26,0:26:72.04:0,72,659	1/1:1,14:15:8.64:353,9,0	1/1:6,20:26:54.12:609,54,0	0/0:20,0:20:53.99:0,54,485	0/0:28,0:28:78.04:0,78,714	1/1:4,18:22:51.15:589,51,0	0/0:21,0:21:60.03:0,60,549	0/0:15,0:15:33.02:0,33,302	0/0:20,0:20:45:0,45,409	0/0:30,0:30:81.01:0,81,732	0/0:11,0:11:30.01:0,30,275	0/0:24,0:24:66.03:0,66,604	0/0:28,0:28:78:0,78,704	0/0:20,0:20:60.03:0,60,549	0/0:19,0:19:47.97:0,48,428	1/1:2,22:24:72.21:830,72,0	0/0:19,0:19:51.02:0,51,467	1/1:1,13:14:39.11:446,39,0
chr10	101947369	.	G	GA	893.14	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.433;DP=602;FS=0.000;HRun=7;HaplotypeScore=67.5389;InbreedingCoeff=0.9685;MQ=85.90;MQ0=0;MQRankSum=-1.776;QD=29.77;ReadPosRankSum=-1.071;VQSLOD=3.6712;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.10:0,81,775	0/0:7,0:7:21.03:0,21,203	0/0:25,0:25:12.89:0,13,338	0/0:18,0:18:12.69:0,13,163	0/0:30,0:30:77.24:0,77,751	0/0:30,0:29:75.11:0,75,724	0/0:12,0:12:24.03:0,24,232	0/0:26,0:26:54.06:0,54,517	0/0:16,0:16:45.06:0,45,429	0/0:26,0:26:72.11:0,72,695	0/0:30,0:30:87.14:0,87,840	0/0:23,0:23:63.10:0,63,608	0/0:21,0:21:63.10:0,63,608	0/0:21,0:21:54.09:0,54,521	0/0:20,0:20:60.10:0,60,579	0/0:20,0:20:51.08:0,51,492	0/0:24,1:25:35.85:0,36,622	0/0:9,0:9:24.02:0,24,226	0/0:20,0:20:48.05:0,48,458	0/0:26,0:26:72.10:0,72,690	0/0:17,0:17:51.08:0,51,493	0/0:19,0:19:51.07:0,51,492	0/0:31,0:31:72.11:0,72,695	0/0:24,0:24:69.01:0,69,647	0/0:21,0:21:60.09:0,60,579	1/1:1,19:20:60.18:724,60,0	0/0:24,0:24:66.10:0,66,637	1/1:2,8:10:24.07:290,24,0
chr10	101948194	.	T	TCA	1899.77	PASS	AB=0.767;AC=28;AF=0.500;AN=56;BaseQRankSum=3.885;DP=669;FS=4.406;HRun=0;HaplotypeScore=122.9232;InbreedingCoeff=0.5754;MQ=59.95;MQ0=12;MQRankSum=-2.293;QD=5.65;ReadPosRankSum=-1.818;VQSLOD=2.3330;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:10.92:69,11,0	1/1:4,4:9:12:138,12,0	1/1:33,0:16:0.47:1,0,0	0/0:36,0:18:2.68:0,3,32	0/1:12,10:24:32.49:109,0,32	0/0:17,0:21:32.58:0,33,309	0/0:29,0:31:38.92:0,39,405	1/1:25,0:25:3.01:45,3,0	0/0:25,0:28:41.13:0,41,386	0/0:28,0:31:18.41:0,18,209	0/0:15,0:16:7.84:0,8,149	1/1:11,8:21:27.09:406,27,0	1/1:11,12:25:15.05:227,15,0	0/0:24,0:28:41.40:0,41,369	0/0:24,0:25:19.35:0,19,396	0/1:11,9:23:18.16:167,0,18	0/0:29,0:32:50.80:0,51,526	1/1:9,0:11:9.43:72,9,0	1/1:6,4:10:5.99:62,6,0	1/1:5,14:17:15.05:226,15,0	1/1:18,7:21:14.59:167,15,0	0/0:23,0:25:17.86:0,18,169	0/1:25,0:25:9.17:9,0,269	0/0:30,0:30:32.91:0,33,348	0/0:26,0:26:4.43:0,4,238	1/1:25,0:25:23.07:148,23,0	0/1:13,6:21:48.70:144,0,49	1/1:6,0:6:11.93:109,12,0
chr10	101948331	.	GCA	G	850.88	PASS	AB=0.928;AC=14;AF=0.250;AN=56;BaseQRankSum=2.732;DP=663;FS=1.189;HRun=0;HaplotypeScore=106.3652;InbreedingCoeff=0.0949;MQ=60.22;MQ0=11;MQRankSum=1.608;QD=3.16;ReadPosRankSum=0.999;VQSLOD=2.4962;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:19.17:0,19,390	0/1:4,0:7:0.01:0,0,0	0/1:29,0:11:0.69:2,0,1	0/0:26,0:9:0.47:0,0,1	1/1:8,0:13:1.55:4,2,0	0/1:13,8:22:65.31:65,0,307	0/1:38,3:41:99:252,0,533	0/1:20,0:20:10.35:10,0,131	0/0:31,1:33:9.27:0,9,686	0/0:20,0:19:30.10:0,30,438	0/1:19,1:20:72.32:72,0,243	0/0:11,0:25:15.30:0,15,130	0/0:6,0:21:8.54:0,9,69	0/0:25,0:26:37.46:0,37,670	0/1:27,1:29:77.72:78,0,525	0/0:6,0:14:9.46:0,9,79	0/1:25,7:32:0.24:0,0,492	1/1:16,7:26:30.61:441,31,0	0/1:21,0:20:46.47:46,0,205	0/0:16,0:15:16.85:0,17,333	0/0:36,0:35:52.30:0,52,713	0/1:7,1:7:19.61:20,0,101	0/0:11,0:13:3.89:0,4,190	0/0:41,3:44:50.58:0,51,1033	0/0:20,4:24:8.27:0,8,464	0/0:7,0:21:46.20:0,46,433	0/0:24,0:24:8.46:0,8,503	0/0:6,0:10:12.01:0,12,119
chr10	101953361	.	GACA	G	527.36	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.295;DP=592;FS=11.703;HRun=0;HaplotypeScore=82.3074;InbreedingCoeff=0.9803;MQ=71.65;MQ0=0;MQRankSum=-0.990;QD=22.93;ReadPosRankSum=1.835;VQSLOD=2.7886;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:42.14:622,42,0	0/0:11,0:11:30.10:0,30,559	0/0:27,0:25:48.74:0,49,950	0/0:22,0:22:51.16:0,51,975	0/0:19,0:19:45.15:0,45,904	0/0:18,0:18:51.14:0,51,968	0/0:33,0:33:84.27:0,84,1680	0/0:29,0:29:66.22:0,66,1283	0/0:18,0:18:45.14:0,45,895	0/0:19,0:19:42.06:0,42,754	0/0:24,0:24:60.21:0,60,1231	0/0:22,0:22:54.16:0,54,1066	0/0:23,0:23:60.20:0,60,1191	0/0:25,0:25:63.22:0,63,1309	0/0:29,0:29:75.26:0,75,1531	0/0:30,0:30:78.27:0,78,1607	0/0:40,0:40:99:0,99,1952	0/0:6,0:6:18.06:0,18,349	0/0:23,0:22:54.19:0,54,1124	0/0:19,0:19:27.09:0,27,562	0/0:10,0:10:18.06:0,18,335	0/0:17,0:17:42.13:0,42,836	0/0:12,0:12:36.12:0,36,749	0/0:26,0:26:66.23:0,66,1375	0/0:20,0:20:48.14:0,48,914	0/0:22,0:22:60.21:0,60,1250	0/0:15,0:15:33.10:0,33,637	0/0:10,0:10:24.08:0,24,489
chr10	101953711	.	T	TTC	651.95	PASS	AB=0.969;AC=25;AF=0.500;AN=50;BaseQRankSum=-0.330;DP=693;FS=2.684;HRun=0;HaplotypeScore=110.5456;InbreedingCoeff=0.1116;MQ=66.37;MQ0=14;MQRankSum=-0.703;QD=1.41;ReadPosRankSum=-1.823;VQSLOD=2.0090;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:0.90:1,0,1	0/1:8,0:8:0:0,0,0	./.	0/1:42,0:29:0:0,0,0	0/1:18,0:18:33.86:34,0,41	0/1:25,0:26:2.29:2,0,96	0/1:23,0:25:2.24:11,0,2	1/1:40,0:39:2.80:13,3,0	0/0:12,0:16:14.16:0,14,83	0/0:29,0:29:1.29:0,1,7	0/1:19,0:19:9.73:10,0,38	1/1:18,7:25:6.02:88,6,0	0/1:19,1:21:42.89:149,0,43	0/1:16,0:16:9.86:10,0,54	0/0:23,0:23:7.87:0,8,45	1/1:22,8:32:3.78:151,4,0	0/0:33,0:33:19.80:0,20,207	0/1:19,6:24:32.33:32,0,43	1/1:22,0:22:6.45:50,6,0	1/1:20,0:20:3.01:31,3,0	1/1:33,0:33:11.27:82,11,0	0/0:16,0:15:2.16:0,2,14	./.	0/0:44,0:44:5.68:0,6,248	0/0:14,0:17:2.80:0,3,13	1/1:29,0:29:9.22:63,9,0	0/1:26,1:29:64.97:65,0,76	./.
chr10	101954680	.	T	TC	8051.91	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-3.534;DP=714;FS=11.171;HRun=1;HaplotypeScore=71.6427;InbreedingCoeff=0.9995;MQ=86.03;MQ0=0;MQRankSum=-3.706;QD=41.29;ReadPosRankSum=3.820;VQSLOD=4.7828;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,48:49:99:2012,126,0	1/1:0,12:12:30.10:479,30,0	0/0:27,0:27:69.22:0,69,932	0/0:19,0:19:51.95:0,52,619	1/1:0,22:22:57.19:910,57,0	0/0:24,0:24:72.24:0,72,1005	0/0:25,0:25:75.23:0,75,1030	0/0:26,0:26:75.23:0,75,1027	0/0:38,0:38:99:0,114,1577	0/0:41,0:41:99:0,111,1542	0/0:20,0:20:60.20:0,60,839	1/1:0,31:31:81.28:1294,81,0	1/1:0,28:28:69.24:1102,69,0	0/0:37,0:37:99:0,108,1491	0/0:33,0:33:99:0,99,1334	1/1:2,19:21:54.18:863,54,0	0/0:24,0:24:69.22:0,69,949	0/0:16,0:16:48.16:0,48,670	0/0:21,0:21:60.18:0,60,819	0/0:18,0:18:54.14:0,54,703	0/0:31,0:31:87.27:0,87,1184	0/0:27,0:27:81.24:0,81,1085	0/0:27,0:27:78.25:0,78,1073	0/0:24,0:24:72.19:0,72,959	0/0:20,0:20:60.20:0,60,839	1/1:1,23:24:30.26:1009,30,0	0/0:21,0:21:57.19:0,57,797	1/1:0,8:8:24.08:383,24,0
chr10	101956327	.	ACATATG	A	831.03	PASS	AB=0.914;AC=8;AF=0.143;AN=56;BaseQRankSum=7.457;DP=894;FS=1.710;HRun=0;HaplotypeScore=255.7463;InbreedingCoeff=0.1770;MQ=50.11;MQ0=13;MQRankSum=-6.891;QD=6.44;ReadPosRankSum=-0.586;VQSLOD=2.3755;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:0.09:0,0,0	0/1:14,3:17:46.66:202,0,47	0/0:61,0:16:45.11:0,45,1135	0/0:84,0:16:38.92:0,39,1004	0/0:16,4:20:3.43:0,3,35	0/0:31,0:31:90.31:0,90,3058	0/0:41,0:40:99:0,114,3858	0/0:32,0:32:96.33:0,96,3482	0/0:49,0:49:99:0,141,4555	0/0:32,0:32:96.33:0,96,3342	0/0:17,0:17:45.63:0,46,1636	0/1:17,2:19:24.39:24,0,69	0/1:18,4:22:99:185,0,240	0/0:35,0:35:99:0,102,3570	0/0:42,0:42:99:0,120,4272	0/1:20,3:23:99:171,0,135	0/0:30,0:30:84.24:0,84,2821	0/0:16,0:16:20.88:0,21,1117	0/0:26,0:25:72.24:0,72,2411	0/0:24,0:24:72.25:0,72,2466	0/0:87,0:86:99:0,238,8393	0/0:22,0:22:66.23:0,66,2122	0/0:29,0:29:84.29:0,84,2899	0/0:38,0:38:99:0,108,3718	0/0:33,0:33:87.30:0,87,3146	0/1:19,0:19:99:204,0,389	0/0:16,0:16:48.15:0,48,1545	1/1:3,0:3:9.03:175,9,0
chr10	101956335	.	G	GTGTGTA	3798.21	PASS	AB=0.701;AC=13;AF=0.232;AN=56;BaseQRankSum=10.514;DP=943;FS=6.348;HRun=0;HaplotypeScore=274.9598;InbreedingCoeff=0.7688;MQ=50.52;MQ0=11;MQRankSum=-10.496;QD=20.98;ReadPosRankSum=-1.483;VQSLOD=2.4265;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,10:29:0.17:0,0,0	1/1:10,10:20:12.19:482,12,0	0/0:60,0:14:26.88:0,27,562	0/0:70,0:14:33.07:0,33,658	0/1:18,8:27:6.05:98,0,6	0/0:33,0:33:87.23:0,87,1875	0/0:44,0:43:99:0,117,2329	0/0:36,0:36:99:0,105,2155	0/0:41,0:41:99:0,114,2493	0/0:35,0:34:93.30:0,93,1976	0/0:20,0:20:51.17:0,51,1150	0/1:9,14:25:14.58:96,0,15	1/1:13,13:26:29.91:777,30,0	0/0:38,0:38:99:0,99,2027	0/0:47,0:47:99:0,123,2699	1/1:10,17:27:15.73:363,16,0	0/0:34,0:34:84.22:0,84,1751	0/0:18,0:18:38.07:0,38,567	0/0:27,0:26:72.21:0,72,1521	0/0:25,0:25:72.22:0,72,1534	0/0:93,0:92:99:0,237,4972	0/0:22,0:22:60.02:0,60,1167	0/0:31,0:31:87.26:0,87,1853	0/0:39,0:39:99:0,105,2245	0/0:35,0:35:93.28:0,93,1992	1/1:16,8:24:63.13:1678,63,0	0/0:14,0:14:39.13:0,39,857	1/1:1,2:3:9.03:303,9,0
chr10	101956339	.	GTGTA	G	587.29	PASS	AB=0.922;AC=11;AF=0.196;AN=56;BaseQRankSum=9.658;DP=947;FS=1.906;HRun=0;HaplotypeScore=247.4449;InbreedingCoeff=0.3584;MQ=50.90;MQ0=12;MQRankSum=-7.727;QD=3.24;ReadPosRankSum=-3.706;VQSLOD=1.7673;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,7:30:2.63:15,3,0	0/1:16,1:18:23.04:75,0,23	0/0:58,0:11:26.98:0,27,564	0/0:66,0:14:38.99:0,39,777	0/1:22,5:27:10.92:19,0,11	0/0:34,0:34:96.20:0,96,2265	0/0:46,0:45:99:0,129,2966	0/0:37,0:37:99:0,111,2848	0/0:40,0:40:99:0,117,2950	0/0:37,0:36:99:0,105,2470	0/0:21,0:21:54.14:0,54,1369	0/1:23,3:26:22.22:22,0,60	0/1:22,2:24:99:102,0,102	0/0:37,0:37:99:0,108,2492	0/0:47,0:47:99:0,132,3321	0/1:28,0:28:47.97:48,0,111	0/0:35,0:35:79.10:0,79,2200	0/0:18,0:18:38.56:0,39,763	0/0:28,0:27:78.19:0,78,1863	0/0:26,0:26:78.19:0,78,1955	0/0:94,0:93:99:0,250,6067	0/0:22,0:22:66.16:0,66,1550	0/0:30,0:30:87.30:0,87,2200	0/0:39,0:39:99:0,114,2759	0/0:37,0:37:99:0,99,2508	1/1:20,5:25:9.86:375,10,0	0/0:14,0:14:39.12:0,39,941	1/1:2,1:3:8.86:82,9,0
chr10	101956345	.	ATG	A	1116.46	PASS	AB=0.861;AC=13;AF=0.232;AN=56;BaseQRankSum=9.844;DP=946;FS=4.428;HRun=0;HaplotypeScore=216.2810;InbreedingCoeff=0.6772;MQ=52.37;MQ0=11;MQRankSum=-4.203;QD=6.13;ReadPosRankSum=-2.787;VQSLOD=2.9259;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,3:29:5.87:75,6,0	1/1:14,5:19:8.51:187,9,0	0/0:49,1:12:20.35:0,20,232	0/0:64,0:24:47.03:0,47,607	1/1:19,8:27:11.29:108,11,0	0/0:34,0:34:75.24:0,75,1197	0/0:41,1:41:63.76:0,64,1550	0/0:43,0:43:69.54:0,70,1381	0/0:39,1:41:72.74:0,73,1631	0/0:33,0:32:75.25:0,75,1227	0/0:22,0:22:42.12:0,42,697	0/1:25,1:26:22.32:130,0,22	0/1:18,7:25:1.60:158,0,2	0/0:36,0:36:93.25:0,93,1432	0/0:45,1:46:84.80:0,85,1877	0/1:21,5:26:49.42:95,0,49	0/0:35,1:36:58.33:0,58,1436	0/0:5,0:21:34.01:0,34,267	0/0:27,0:27:66.16:0,66,956	0/0:32,0:32:51.96:0,52,1358	0/0:94,0:92:99:0,229,3527	0/0:23,0:23:66.21:0,66,1064	0/0:31,1:32:39.71:0,40,1211	0/0:38,0:38:99:0,102,1647	0/0:37,0:37:90.29:0,90,1477	1/1:20,6:26:10.71:462,11,0	0/0:13,0:13:33.09:0,33,509	1/1:4,0:4:8.64:68,9,0
chr10	101956419	.	GGATA	G	195.02	PASS	AB=0.847;AC=6;AF=0.107;AN=56;BaseQRankSum=6.010;DP=906;FS=14.264;HRun=0;HaplotypeScore=198.7324;InbreedingCoeff=-0.1227;MQ=54.96;MQ0=3;MQRankSum=-5.654;QD=1.29;ReadPosRankSum=0.417;VQSLOD=1.5817;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:26.18:0,26,416	0/1:9,4:13:92.27:92,0,297	0/0:39,0:22:66.23:0,66,1659	0/0:37,0:24:53.19:0,53,1149	0/1:22,7:33:14.45:14,0,752	0/0:28,0:28:84.29:0,84,2377	0/0:28,0:28:78.16:0,78,2149	0/0:40,0:40:99:0,120,3248	0/0:40,0:40:99:0,117,3170	0/0:32,0:32:93.32:0,93,2592	0/0:26,0:27:34.58:0,35,2078	0/1:29,2:31:13.13:13,0,875	0/1:14,3:17:58.03:58,0,778	0/0:45,0:46:99:0,120,3408	0/0:50,0:50:99:0,151,4061	0/1:23,4:27:70.47:70,0,605	0/0:33,0:34:98.55:0,99,2630	0/0:33,0:33:78.27:0,78,2141	0/0:16,0:16:45.15:0,45,1178	0/0:32,0:32:93.10:0,93,2625	0/0:85,0:85:99:0,232,6352	0/0:44,0:44:99:0,126,3488	0/0:21,0:21:57.13:0,57,1599	0/0:41,1:42:99:0,120,3306	0/0:35,0:35:99:0,102,2847	0/1:27,2:30:69.50:70,0,1822	0/0:15,0:15:45.15:0,45,1247	0/0:3,0:3:6.02:0,6,173
chr10	101956429	.	GCA	G	314.06	PASS	AB=0.841;AC=6;AF=0.107;AN=56;BaseQRankSum=7.268;DP=888;FS=23.912;HRun=0;HaplotypeScore=159.3547;InbreedingCoeff=-0.1265;MQ=55.17;MQ0=5;MQRankSum=-5.287;QD=2.15;ReadPosRankSum=-1.828;VQSLOD=0.9695;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:11.16:0,11,209	0/1:7,4:11:42.20:42,0,167	0/0:42,2:23:66.20:0,66,1271	0/0:33,0:17:43.29:0,43,768	0/1:22,11:33:99:115,0,508	0/0:27,0:27:81.26:0,81,1583	0/0:28,0:28:78.16:0,78,1522	0/0:44,0:44:99:0,132,2615	0/0:38,0:38:99:0,111,2205	0/0:31,0:31:79.58:0,80,1737	0/0:25,0:25:67.58:0,68,1412	0/1:27,2:29:8.87:9,0,569	0/1:14,3:17:77.43:77,0,468	0/0:44,0:44:99:0,117,2314	0/0:45,0:45:99:0,132,2577	0/1:23,4:27:50.35:50,0,399	0/0:34,0:34:99:0,99,1924	0/0:34,0:34:78.07:0,78,1458	0/0:17,0:15:45.10:0,45,868	0/0:30,0:30:81.16:0,81,1602	0/0:84,0:84:99:0,238,4634	0/0:42,0:42:99:0,123,2496	0/0:23,0:23:63.22:0,63,1221	0/0:40,1:41:99:0,117,2334	0/0:33,0:33:99:0,99,1963	0/1:26,3:29:99:142,0,1047	0/0:18,0:18:54.19:0,54,1097	0/0:2,0:2:3.01:0,3,61
chr10	101956987	.	C	CGTGTGTGTGTGTGTGT	3543.97	PASS	AB=0.540;AC=14;AF=0.250;AN=56;BaseQRankSum=4.870;DP=710;FS=7.029;HRun=0;HaplotypeScore=277.0076;InbreedingCoeff=0.7837;MQ=64.85;MQ0=2;MQRankSum=-8.468;QD=22.01;ReadPosRankSum=-0.886;VQSLOD=1.1942;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:48:70.10:287,0,70	1/1:0,6:9:5.81:242,6,0	0/0:31,0:24:57.72:0,58,1249	0/0:26,0:19:32.09:0,32,797	1/1:3,14:21:2.46:226,2,0	0/0:31,0:31:93.24:0,93,3119	0/0:23,0:23:66.20:0,66,2740	0/0:37,0:37:99:0,108,2584	0/0:40,0:40:99:0,120,4785	0/0:27,0:27:81.23:0,81,2848	0/0:23,0:23:66.15:0,66,2283	0/1:2,13:19:0.60:521,0,1	1/1:2,10:18:15.94:1079,16,0	0/0:32,0:32:93.26:0,93,3842	0/0:22,0:22:66.13:0,66,2107	1/1:1,1:21:9.03:575,9,0	0/0:32,0:32:96.22:0,96,3482	0/0:19,0:19:54.13:0,54,2183	0/0:16,0:16:45.09:0,45,952	0/0:34,0:34:99:0,99,3662	0/0:22,0:22:57.16:0,57,1880	0/0:22,0:22:63.17:0,63,2518	0/0:31,0:31:90.22:0,90,3228	0/0:25,0:25:63.10:0,63,1999	0/0:21,0:21:60.12:0,60,1892	1/1:16,0:14:28.97:373,29,0	0/0:34,0:34:99:0,99,3811	1/1:9,0:9:26.88:242,27,0
chr10	101957696	.	GT	G	3011.86	PASS	AB=0.818;AC=17;AF=0.304;AN=56;BaseQRankSum=13.633;DP=541;FS=5.322;HRun=10;HaplotypeScore=69.8951;InbreedingCoeff=0.8407;MQ=73.25;MQ0=1;MQRankSum=-1.889;QD=17.02;ReadPosRankSum=1.826;VQSLOD=4.2823;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:34:60.66:634,61,0	1/1:0,5:5:14.90:121,15,0	0/0:25,0:8:5.85:0,6,48	0/0:16,0:12:10.94:0,11,101	1/1:3,30:33:58.18:614,58,0	0/0:24,0:24:63.12:0,63,663	0/0:13,0:13:39.09:0,39,423	0/0:31,0:31:69.10:0,69,702	0/0:9,0:9:15.03:0,15,159	0/0:13,0:13:33.07:0,33,341	0/0:12,0:12:22.19:0,22,317	1/1:5,10:16:42.52:336,43,0	1/1:4,25:29:65.97:573,66,0	0/0:25,0:25:63.16:0,63,688	0/0:19,1:20:19.05:0,19,423	1/1:1,18:19:44.99:390,45,0	0/0:24,0:24:60.04:0,60,602	0/0:13,0:13:18.03:0,18,189	0/1:14,4:18:58.99:59,0,294	0/0:22,0:22:66.09:0,66,676	0/0:7,0:7:18:0,18,177	0/0:18,0:18:48.11:0,48,513	0/0:23,0:23:59.96:0,60,616	0/0:19,0:19:48.13:0,48,531	0/0:16,1:17:6.91:0,7,333	1/1:2,18:20:53.97:461,54,0	0/0:32,0:32:78.10:0,78,800	1/1:1,2:3:3:26,3,0
chr10	101957861	.	TC	T	6598.16	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.959;DP=667;FS=3.845;HRun=1;HaplotypeScore=60.0826;InbreedingCoeff=0.9998;MQ=75.85;MQ0=0;MQRankSum=-2.586;QD=38.36;ReadPosRankSum=4.853;VQSLOD=5.3458;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:99:1361,99,0	1/1:0,13:13:39.13:545,39,0	0/0:25,0:25:75.24:0,75,1143	0/0:22,0:22:66.19:0,66,967	1/1:0,20:20:57.07:751,57,0	0/0:24,0:24:72.25:0,72,1150	0/0:21,0:21:63.19:0,63,961	0/0:37,0:37:99:0,111,1692	0/0:21,0:21:63.21:0,63,1004	0/0:31,0:31:90.27:0,90,1375	0/0:28,0:28:81.25:0,81,1237	1/1:0,16:16:45.15:629,45,0	1/1:0,27:27:75.25:1048,75,0	0/0:25,0:25:75.24:0,75,1162	0/0:26,1:27:39.34:0,39,1204	1/1:0,29:29:72.24:1006,72,0	0/0:20,0:20:60.20:0,60,950	0/0:15,0:15:45.15:0,45,718	0/0:21,0:21:63.19:0,63,979	0/0:30,0:30:90.28:0,90,1391	0/0:24,0:24:72.25:0,72,1150	0/0:19,0:19:57.17:0,57,873	0/0:22,0:22:62.21:0,62,880	0/0:26,0:26:78.27:0,78,1244	0/0:26,0:26:78.22:0,78,1196	1/1:0,21:21:63.21:881,63,0	0/0:31,0:30:93.32:0,93,1485	1/1:0,9:9:27.09:377,27,0
chr10	101959241	.	G	GTATGTA	5690.01	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.428;DP=807;FS=4.553;HRun=0;HaplotypeScore=188.3984;InbreedingCoeff=0.9905;MQ=67.47;MQ0=3;MQRankSum=-10.208;QD=28.17;ReadPosRankSum=0.713;VQSLOD=4.6362;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:24:12.04:414,12,0	1/1:11,0:11:15.05:413,15,0	0/0:40,0:34:36.44:0,36,963	0/0:23,0:18:28.96:0,29,412	1/1:24,0:24:23.81:400,24,0	0/0:25,0:25:66.13:0,66,1233	0/0:25,0:25:57.15:0,57,1103	0/0:47,0:47:99:0,123,1962	0/0:36,0:36:96.23:0,96,1889	0/0:47,0:47:99:0,129,2702	0/0:35,0:35:99:0,102,1986	1/1:30,0:30:39.10:1012,39,0	1/1:32,0:32:24.08:660,24,0	0/0:29,0:29:72.17:0,72,1382	0/0:26,0:25:72.18:0,72,1409	1/1:31,0:31:21.07:578,21,0	0/0:20,0:20:45.35:0,45,865	0/0:19,0:19:48.05:0,48,944	0/0:12,0:12:35.96:0,36,621	0/0:41,0:41:99:0,117,2339	0/0:30,0:30:84.12:0,84,1411	0/0:30,0:30:78.23:0,78,1613	0/0:23,0:23:57.11:0,57,1090	0/0:24,0:24:51.10:0,51,996	0/0:37,0:37:99:0,102,1981	1/1:36,0:36:87:1754,87,0	0/0:32,0:32:90.22:0,90,1758	1/1:14,0:14:29.96:459,30,0
chr10	101959243	.	A	ATGTATATGTATG	11974.05	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-8.787;DP=868;FS=8.663;HRun=0;HaplotypeScore=264.0211;InbreedingCoeff=0.9858;MQ=65.90;MQ0=4;MQRankSum=-9.677;QD=46.96;ReadPosRankSum=0.771;VQSLOD=3.2109;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:12.04:158,12,0	1/1:0,10:15:15.05:911,15,0	0/0:40,0:33:64.93:0,65,1006	0/0:30,0:20:31.36:0,31,534	1/1:3,28:37:12.04:728,12,0	0/0:26,0:26:66.16:0,66,1830	0/0:25,0:25:57.15:0,57,1567	0/0:49,0:49:99:0,135,2706	0/0:35,0:35:96.25:0,96,2891	0/0:49,0:49:99:0,132,4009	0/0:35,0:35:99:0,102,2944	1/1:1,29:36:39.10:2206,39,0	1/1:2,34:42:24.08:1456,24,0	0/0:29,0:29:72.17:0,72,2051	0/0:27,0:26:75.19:0,75,2182	1/1:3,32:41:21.07:1275,21,0	0/0:20,0:20:48.52:0,49,1162	0/0:18,0:18:51.08:0,51,1390	0/0:13,0:13:38.97:0,39,925	0/0:40,0:40:99:0,120,3582	0/0:30,0:30:84.15:0,84,2026	0/0:30,0:30:84.24:0,84,2510	0/0:23,0:23:56.24:0,56,1641	0/0:23,0:23:51.10:0,51,1448	0/0:38,0:38:99:0,108,3001	1/1:6,38:47:99:4477,111,0	0/0:32,0:32:90.22:0,90,2667	1/1:13,1:14:30.05:762,30,0
chr10	101959325	.	G	GTCTA	6451.13	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-0.740;DP=849;FS=2.913;HRun=0;HaplotypeScore=154.0969;InbreedingCoeff=0.9062;MQ=58.77;MQ0=9;MQRankSum=1.158;QD=36.24;ReadPosRankSum=0.666;VQSLOD=4.7505;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:21.30:0,21,316	1/1:9,3:12:30.05:534,30,0	0/0:32,0:13:6.02:0,6,81	0/1:20,0:11:0.75:1,0,27	1/1:35,5:40:75.06:1542,75,0	0/0:22,0:22:40:0,40,593	0/0:19,0:19:39.11:0,39,575	0/0:51,0:48:60.04:0,60,793	0/0:26,0:26:54.14:0,54,802	0/0:47,0:47:90.22:0,90,1322	0/0:22,0:22:51.14:0,51,778	1/1:29,8:37:72.19:1489,72,0	1/1:27,8:35:72.20:1553,72,0	0/0:33,0:33:72.21:0,72,1115	0/0:37,0:37:84.20:0,84,1211	1/1:29,5:34:60.18:1334,60,0	0/0:31,0:32:56.88:0,57,823	0/0:32,0:32:34.62:0,35,684	0/0:12,0:11:11.95:0,12,141	0/0:39,0:39:96.23:0,96,1395	0/0:12,0:12:27.06:0,27,390	0/0:35,0:35:72.22:0,72,1107	0/0:25,0:25:45:0,45,663	0/0:23,0:23:51.40:0,51,770	0/0:47,0:48:99:0,105,1573	0/0:47,0:47:81.34:0,81,920	0/0:45,0:45:99:0,102,1515	0/0:14,0:14:22.80:0,23,226
chr10	101959351	.	C	CATCT	2236.12	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-1.057;DP=779;FS=0.605;HRun=0;HaplotypeScore=155.9234;InbreedingCoeff=0.8243;MQ=57.42;MQ0=14;MQRankSum=-2.303;QD=28.67;ReadPosRankSum=0.667;VQSLOD=3.3204;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:18:4.30:21,4,0	0/0:10,0:10:26.65:0,27,278	0/0:12,0:5:3.01:0,3,49	0/0:10,0:4:3.01:0,3,49	0/0:35,0:35:56.13:0,56,615	0/0:21,0:22:51.17:0,51,804	0/0:23,0:23:42.14:0,42,678	0/0:44,0:40:45.07:0,45,613	0/0:27,0:27:57.18:0,57,890	0/0:38,0:38:84.29:0,84,1360	0/0:20,0:20:42.12:0,42,595	0/0:35,0:36:56.03:0,56,580	0/0:37,0:39:66.67:0,67,769	0/0:31,0:31:69.22:0,69,1068	0/0:38,0:38:72.21:0,72,1110	0/0:29,0:30:44.36:0,44,468	0/0:29,0:29:53.90:0,54,810	0/0:26,0:29:33.92:0,34,868	0/0:7,0:6:11.98:0,12,119	0/0:38,0:38:69.21:0,69,1071	0/0:17,0:17:42.12:0,42,650	0/0:32,0:32:63.21:0,63,1007	0/0:23,0:23:48.14:0,48,721	0/0:28,0:28:51.17:0,51,816	0/0:39,0:39:50.99:0,51,1054	1/1:33,7:41:87.24:1823,87,0	0/0:44,0:44:99:0,105,1518	1/1:5,11:17:24.86:525,25,0
chr10	101960341	.	T	TATCCA	2750.78	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.163;DP=628;FS=3.452;HRun=0;HaplotypeScore=117.5672;InbreedingCoeff=0.9939;MQ=90.28;MQ0=0;MQRankSum=-5.812;QD=67.09;ReadPosRankSum=2.521;VQSLOD=4.7820;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,35:41:93.32:2846,93,0	0/0:8,0:8:24.08:0,24,482	0/0:25,0:25:62.76:0,63,1189	0/0:24,0:24:65.74:0,66,1024	0/0:25,0:25:54.14:0,54,963	0/0:25,0:25:69.17:0,69,1268	0/0:9,0:9:24.05:0,24,421	0/0:30,0:29:75.24:0,75,1455	0/0:20,0:20:54.18:0,54,1083	0/0:24,0:24:60.18:0,60,1133	0/0:21,0:21:57.02:0,57,1008	0/0:21,0:21:60.19:0,60,1183	0/0:31,0:31:81.26:0,81,1617	0/0:23,0:23:63.17:0,63,1178	0/0:31,0:31:87.30:0,87,1803	0/0:31,0:31:87.30:0,87,1794	0/0:25,0:25:75.24:0,75,1498	0/0:19,0:19:54.19:0,54,1101	0/0:11,0:11:27.09:0,27,543	0/0:28,0:28:69.17:0,69,1233	0/0:23,0:23:66.16:0,66,1251	0/0:22,0:22:57.15:0,57,1061	0/0:23,0:23:63.20:0,63,1220	0/0:10,0:10:27.09:0,27,560	0/0:26,0:26:75.23:0,75,1453	0/0:19,0:19:54.12:0,54,1015	0/0:16,0:16:45.15:0,45,933	0/0:17,0:17:45.12:0,45,856
chr10	101960772	.	A	AAC	1079.37	PASS	AB=0.881;AC=19;AF=0.352;AN=54;BaseQRankSum=3.162;DP=474;FS=0.000;HRun=0;HaplotypeScore=82.8334;InbreedingCoeff=0.5710;MQ=66.52;MQ0=4;MQRankSum=-1.039;QD=6.10;ReadPosRankSum=-1.060;VQSLOD=2.8938;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:4.21:0,4,23	1/1:5,0:5:2.23:14,2,0	./.	0/0:19,0:13:1.55:0,2,4	0/0:14,6:20:3.48:0,3,35	0/0:13,0:13:21.68:0,22,215	1/1:16,3:19:23.80:275,24,0	1/1:23,0:23:8.46:40,8,0	0/0:6,0:6:15.04:0,15,168	0/0:15,0:15:24.06:0,24,262	0/0:19,0:20:10.97:0,11,172	0/1:12,1:12:24.89:64,0,25	0/1:9,6:15:37.32:272,0,37	0/0:14,0:14:26.29:0,26,277	0/0:19,0:20:28.79:0,29,308	1/1:12,1:13:17.06:228,17,0	0/0:20,0:23:35.43:0,35,348	0/0:9,0:10:12.24:0,12,69	1/1:18,0:18:6.78:39,7,0	1/1:18,0:17:1.95:64,2,0	1/1:23,0:23:24.24:170,24,0	0/1:18,0:18:4.90:5,0,181	0/0:32,0:32:38.59:0,39,495	0/0:24,0:25:39.02:0,39,386	0/0:19,0:22:29.69:0,30,278	0/0:11,0:11:13.93:0,14,141	1/1:12,0:12:13.75:88,14,0	0/0:2,0:2:3.01:0,3,34
chr10	101960819	.	A	ACACCACCAC	1290.79	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=5.302;DP=538;FS=0.853;HRun=0;HaplotypeScore=134.1534;InbreedingCoeff=0.7413;MQ=47.84;MQ0=55;MQRankSum=-6.185;QD=13.73;ReadPosRankSum=-4.629;VQSLOD=0.2116;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:16.30:254,16,0	1/1:2,4:6:3.01:55,3,0	0/0:54,0:5:12.02:0,12,218	0/0:58,0:10:21.05:0,21,359	1/1:16,0:16:2.06:53,2,0	0/0:15,0:14:23.18:0,23,658	0/0:31,0:32:60.31:0,60,1587	0/0:24,0:20:36.09:0,36,694	0/0:12,0:12:18.06:0,18,453	0/0:9,0:9:9.03:0,9,170	0/0:13,0:13:15.05:0,15,415	1/1:10,0:9:9.03:183,9,0	1/1:18,0:16:9.03:267,9,0	0/0:14,0:13:24.08:0,24,626	0/0:16,0:16:39.13:0,39,1088	1/1:5,6:11:8.06:189,8,0	0/0:27,0:27:54.19:0,54,1455	0/0:13,0:14:29.90:0,30,573	0/0:18,0:15:27.07:0,27,528	0/0:17,0:15:24.55:0,25,642	0/0:27,0:23:23.11:0,23,650	0/0:19,0:17:25.33:0,25,626	0/0:19,0:18:32.92:0,33,780	0/0:23,0:23:45.01:0,45,1092	0/0:19,0:17:30.09:0,30,776	0/1:16,0:15:63.01:420,0,63	0/0:13,0:12:18.06:0,18,499	1/1:2,0:2:3.01:40,3,0
chr10	101960824	.	A	ACCACCACCA	1290.51	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=5.260;DP=538;FS=0.853;HRun=0;HaplotypeScore=130.9490;InbreedingCoeff=0.7412;MQ=50.39;MQ0=55;MQRankSum=-6.087;QD=14.18;ReadPosRankSum=-4.309;VQSLOD=1.2415;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:16.30:254,16,0	1/1:6,0:6:3.01:55,3,0	0/0:56,0:7:12.02:0,12,218	0/0:61,0:13:21.05:0,21,359	1/1:13,0:13:2.06:53,2,0	0/0:21,0:20:24.08:0,24,660	0/0:28,0:28:60.31:0,60,1587	0/0:23,0:19:36.09:0,36,694	0/0:8,0:8:18.06:0,18,453	0/0:16,0:16:8.97:0,9,170	0/0:8,0:8:15.05:0,15,415	1/1:11,0:10:9.03:183,9,0	1/1:11,4:14:9.03:266,9,0	0/0:13,0:12:24.08:0,24,626	0/0:16,0:16:39.13:0,39,1088	1/1:10,0:10:8.06:189,8,0	0/0:24,0:24:54.19:0,54,1455	0/0:12,0:12:30.03:0,30,573	0/0:20,0:17:27.07:0,27,527	0/0:18,0:16:24:0,24,641	0/0:32,0:28:23.15:0,23,650	0/0:18,0:16:24.08:0,24,623	0/0:18,0:17:33.08:0,33,781	0/0:22,0:22:45.12:0,45,1092	0/0:22,0:19:30.09:0,30,776	0/1:16,0:15:63.01:420,0,63	0/0:11,0:10:18.06:0,18,499	1/1:2,0:2:3.01:40,3,0
chr10	101961356	.	CA	C	270.86	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=5.949;DP=552;FS=18.073;HRun=1;HaplotypeScore=60.7360;InbreedingCoeff=0.7292;MQ=101.13;MQ0=0;MQRankSum=-4.157;QD=20.84;ReadPosRankSum=-4.426;VQSLOD=1.5822;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,0:1:3.01:41,3,0	0/0:35,0:35:99:0,102,1555	0/0:26,0:26:77.93:0,78,1094	1/1:1,0:1:3.01:41,3,0	0/0:13,0:13:39.13:0,39,623	0/0:30,0:30:90.29:0,90,1414	0/0:28,0:28:84.26:0,84,1277	0/0:32,0:32:87.30:0,87,1385	0/0:27,0:27:81.28:0,81,1295	0/0:16,0:16:45.15:0,45,713	1/1:0,2:2:6.02:81,6,0	1/1:4,0:4:12.01:130,12,0	0/0:17,0:17:51.17:0,51,815	0/0:35,0:35:99:0,105,1551	1/1:1,0:1:3:26,3,0	0/0:28,0:28:84.25:0,84,1294	0/0:18,0:18:51.17:0,51,815	0/0:30,0:30:87.25:0,87,1311	0/0:29,0:29:87.30:0,87,1389	0/0:39,0:39:99:0,111,1768	0/0:28,0:28:77.46:0,77,1225	0/0:23,0:23:66.21:0,66,1027	0/0:24,0:24:72.25:0,72,1147	0/0:24,0:24:72.25:0,72,1150	0/1:2,0:2:25.37:25,0,42	0/0:37,0:37:99:0,111,1711	1/1:0,2:2:6.02:81,6,0
chr10	101962228	.	ATG	A	253.76	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.010;DP=667;FS=0.000;HRun=0;HaplotypeScore=104.3190;InbreedingCoeff=0.7942;MQ=65.68;MQ0=4;MQRankSum=0.508;QD=14.10;ReadPosRankSum=0.433;VQSLOD=3.4052;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,9:18:30.07:348,30,0	0/0:19,0:19:37.52:0,38,270	0/0:34,1:21:1.55:0,2,523	0/0:26,0:18:31.88:0,32,480	0/0:34,0:34:75.96:0,76,496	0/0:21,0:21:53.43:0,53,786	0/0:17,0:17:39.13:0,39,624	0/0:42,0:42:87.27:0,87,1352	0/0:22,0:22:63.22:0,63,1027	0/0:24,0:24:66.01:0,66,1041	0/0:26,0:26:65:0,65,1008	0/0:27,0:27:70.33:0,70,563	0/0:18,0:18:41.18:0,41,342	0/0:20,1:21:16.32:0,16,738	0/0:22,0:22:48.16:0,48,773	0/0:19,0:19:29.25:0,29,176	0/0:23,0:23:62.70:0,63,918	0/0:16,0:15:20.84:0,21,115	0/0:20,0:20:36.11:0,36,561	0/0:33,0:33:80.93:0,81,1265	0/0:12,0:12:21.07:0,21,344	0/0:28,0:28:78.25:0,78,1248	0/0:35,0:35:95.98:0,96,1499	0/0:15,0:15:36.10:0,36,560	0/0:24,0:24:59.94:0,60,945	0/0:28,1:29:44.89:0,45,590	0/0:33,1:33:61.80:0,62,1505	0/0:5,0:5:14.43:0,14,105
chr10	101962244	.	ATGTG	A	5381.39	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.500;DP=698;FS=28.735;HRun=0;HaplotypeScore=114.6752;InbreedingCoeff=0.9691;MQ=59.09;MQ0=8;MQRankSum=-0.018;QD=31.47;ReadPosRankSum=5.398;VQSLOD=3.0363;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:20:13.81:191,14,0	1/1:1,17:18:36.97:595,37,0	0/0:49,0:22:42.06:0,42,935	0/0:31,0:19:46.69:0,47,917	1/1:2,32:34:69.24:1199,69,0	0/0:21,0:23:59.77:0,60,1309	0/0:15,0:15:42.13:0,42,970	0/0:38,0:38:93.32:0,93,2152	0/0:24,0:24:63.22:0,63,1518	0/0:29,1:30:29.14:0,29,1814	0/0:29,0:29:78.22:0,78,1732	1/1:7,22:29:37.20:918,37,0	1/1:4,14:18:30.10:521,30,0	0/0:21,0:22:63:0,63,1382	0/0:18,0:18:42.14:0,42,980	1/1:2,14:16:30.10:521,30,0	0/0:22,0:23:59.99:0,60,1364	0/0:7,0:19:25.39:0,25,132	0/0:16,0:16:30.09:0,30,584	0/0:36,0:38:99:0,105,2267	0/0:9,0:9:24.08:0,24,555	0/0:29,0:29:81.25:0,81,1961	0/0:38,0:39:99:0,105,2373	0/0:13,0:13:33.11:0,33,777	0/0:21,0:22:59.96:0,60,1352	1/1:4,26:30:5.06:1227,5,0	0/0:37,0:36:99:0,105,2428	1/1:2,4:6:12.03:208,12,0
chr10	101962357	.	TCA	T	4158.59	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=11.473;DP=638;FS=11.073;HRun=0;HaplotypeScore=77.1197;InbreedingCoeff=0.8646;MQ=73.57;MQ0=6;MQRankSum=-1.190;QD=24.04;ReadPosRankSum=3.780;VQSLOD=3.9505;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:13.53:14,0,348	1/1:2,5:7:15.05:189,15,0	0/0:39,0:28:23.65:0,24,471	0/0:36,0:27:57.19:0,57,834	1/1:1,23:23:57.18:718,57,0	0/0:18,0:18:51.13:0,51,773	0/0:13,0:13:36.10:0,36,541	0/0:31,0:30:63.16:0,63,927	0/0:22,0:23:62.98:0,63,878	0/0:23,0:23:66.18:0,66,999	0/0:23,0:23:57.18:0,57,917	1/1:1,20:21:36.08:438,36,0	1/1:1,30:31:75.24:946,75,0	0/0:21,0:21:57.17:0,57,895	0/0:23,0:23:60.16:0,60,922	1/1:2,25:27:10.35:670,10,0	0/0:25,0:25:60.11:0,60,865	0/0:9,0:9:21.05:0,21,322	0/0:15,1:16:4.23:0,4,513	0/0:31,0:31:75.22:0,75,1172	0/0:20,0:20:17.32:0,17,548	0/0:13,0:13:33.07:0,33,496	0/0:29,0:29:48.37:0,48,1043	0/0:16,0:16:42.07:0,42,594	0/0:20,0:20:57.14:0,57,844	1/1:2,32:34:46.46:1071,46,0	0/0:35,0:34:83.54:0,84,1414	1/1:0,6:6:9.03:113,9,0
chr10	101964347	.	GT	G	2024.58	PASS	AB=0.749;AC=16;AF=0.286;AN=56;BaseQRankSum=9.067;DP=592;FS=8.447;HRun=11;HaplotypeScore=66.1652;InbreedingCoeff=0.8091;MQ=72.91;MQ0=0;MQRankSum=1.258;QD=11.77;ReadPosRankSum=0.459;VQSLOD=2.7251;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,1:22:25.55:107,26,0	1/1:2,6:8:17.98:148,18,0	0/1:27,1:17:10.33:10,0,108	0/0:14,0:10:20.61:0,21,159	1/1:5,24:29:71.87:589,72,0	0/0:22,0:23:69.01:0,69,717	0/0:15,1:16:20.47:0,20,420	0/0:33,0:34:75.86:0,76,752	0/0:12,0:13:11.56:0,12,310	0/0:24,0:24:66.16:0,66,698	0/0:28,0:29:80.96:0,81,812	1/1:1,9:10:20.98:172,21,0	1/1:4,14:18:35.95:295,36,0	0/0:12,0:12:36.08:0,36,375	0/0:17,0:18:17.33:0,17,366	1/1:3,18:21:18.85:362,19,0	0/0:31,2:35:34.62:0,35,740	0/0:8,0:26:47.81:0,48,265	0/0:19,1:22:31.99:0,32,491	0/0:29,1:31:56.38:0,56,781	0/0:7,0:7:18.03:0,18,185	0/0:6,0:8:23.89:0,24,238	0/0:25,0:26:62.98:0,63,646	0/0:16,0:16:42.08:0,42,431	0/0:28,2:29:25.90:0,26,686	1/1:7,21:28:8.89:455,9,0	0/0:32,1:35:80.11:0,80,983	0/1:1,7:8:17:84,0,17
chr10	101965375	.	GAGCACTGACTC	G	8790.97	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.825;DP=617;FS=9.514;HRun=0;HaplotypeScore=176.5073;InbreedingCoeff=0.9634;MQ=51.53;MQ0=16;MQRankSum=-12.354;QD=90.63;ReadPosRankSum=3.230;VQSLOD=4.0587;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:16:36.12:1329,36,0	1/1:1,5:6:15.52:555,16,0	0/0:25,0:6:15.05:0,15,576	0/0:43,0:14:42.11:0,42,1301	1/1:0,9:8:18.06:579,18,0	0/0:24,0:24:69.24:0,69,3841	0/0:19,0:19:39.13:0,39,2125	0/0:42,0:42:99:0,125,6403	0/0:20,0:20:54.19:0,54,3056	0/0:27,0:27:81.28:0,81,4351	0/0:18,0:18:48.16:0,48,2473	1/1:0,19:19:51.18:1899,51,0	1/1:0,15:15:36.12:1340,36,0	0/0:19,0:19:51.18:0,51,2702	0/0:28,0:28:81.28:0,81,4516	1/1:0,20:20:57.20:2123,57,0	0/0:39,0:39:99:0,99,5554	0/0:26,0:25:64.10:0,64,3479	0/0:22,0:21:63.22:0,63,3261	0/0:20,0:19:54.17:0,54,2870	0/0:52,0:52:99:0,147,8181	0/0:12,0:12:30.09:0,30,1551	0/0:13,0:13:30.10:0,30,1680	0/0:25,0:24:48.16:0,48,2490	0/0:18,0:18:54.16:0,54,2908	1/1:0,10:8:24.08:853,24,0	0/0:28,0:27:81.28:0,81,4503	1/1:0,2:2:3.01:112,3,0
chr10	101966088	.	C	CT	4025.86	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=4.801;DP=497;FS=12.398;HRun=5;HaplotypeScore=69.4331;InbreedingCoeff=0.9630;MQ=95.33;MQ0=0;MQRankSum=-4.824;QD=31.95;ReadPosRankSum=1.065;VQSLOD=3.4336;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:24:66.20:842,66,0	1/1:1,9:10:30.09:380,30,0	0/0:25,0:25:47.13:0,47,431	0/0:30,0:28:46.18:0,46,447	1/1:3,26:30:81.26:1058,81,0	0/0:18,0:18:48.10:0,48,507	0/0:16,0:16:42.03:0,42,415	0/0:31,0:31:84.15:0,84,863	0/0:10,0:10:30.08:0,30,322	0/0:17,0:17:45.10:0,45,479	0/0:16,0:16:45.99:0,46,479	1/1:4,9:13:33.09:406,33,0	1/1:5,12:17:45.10:545,45,0	0/0:14,0:14:39.03:0,39,397	0/0:22,0:22:66.14:0,66,694	1/1:5,4:9:21.06:261,21,0	0/0:20,0:20:57.12:0,57,603	0/0:18,0:18:51.13:0,51,548	0/0:19,0:19:51.07:0,51,517	0/0:20,0:20:60.14:0,60,634	0/0:7,0:7:18.04:0,18,187	0/0:9,0:9:24.06:0,24,258	0/0:17,0:17:51.11:0,51,537	0/0:12,0:12:33.06:0,33,341	0/0:21,0:21:59.89:0,60,624	1/1:7,8:14:2.57:337,3,0	0/0:27,0:27:72.16:0,72,763	1/1:2,5:7:15.05:197,15,0
chr10	101966133	.	AAT	A	4394.48	PASS	AB=0.517;AC=15;AF=0.268;AN=56;BaseQRankSum=14.481;DP=474;FS=19.730;HRun=0;HaplotypeScore=61.8455;InbreedingCoeff=0.8954;MQ=64.26;MQ0=0;MQRankSum=-9.793;QD=36.02;ReadPosRankSum=1.773;VQSLOD=5.1095;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:42.05:560,42,0	1/1:0,9:9:27.09:396,27,0	0/0:8,0:8:24.05:0,24,345	0/0:5,0:4:6.02:0,6,108	1/1:2,33:35:96.16:1301,96,0	0/0:20,0:20:60.19:0,60,1019	0/0:10,0:10:30.09:0,30,503	0/0:25,0:25:75.23:0,75,1264	0/0:20,0:20:60.14:0,60,989	0/0:20,0:20:60.21:0,60,1068	0/0:28,0:28:84.17:0,84,1273	1/1:0,14:14:39.09:548,39,0	1/1:2,16:18:42.06:552,42,0	0/0:18,0:18:54.13:0,54,853	0/0:13,0:13:36.12:0,36,642	1/1:0,6:6:18.06:265,18,0	0/0:19,0:19:57.13:0,57,882	0/0:18,0:18:51.04:0,51,824	0/0:28,0:28:81.20:0,81,1223	0/0:24,0:24:72.10:0,72,1194	0/0:6,0:6:18.04:0,18,291	0/0:8,0:8:24.07:0,24,370	0/0:17,0:17:51.11:0,51,852	0/0:8,0:8:21.07:0,21,369	0/0:31,0:31:93.31:0,93,1626	0/1:1,14:15:8.77:553,0,9	0/0:26,0:26:75.19:0,75,1167	1/1:0,5:5:15.05:220,15,0
chr10	101966279	.	A	AATGG	540.67	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=-4.395;DP=557;FS=2.925;HRun=0;HaplotypeScore=127.3582;InbreedingCoeff=0.6756;MQ=63.74;MQ0=6;MQRankSum=2.000;QD=30.04;ReadPosRankSum=0.018;VQSLOD=3.6731;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:6.01:0,6,56	0/0:5,0:5:6.01:0,6,56	./.	0/0:31,0:19:3.01:0,3,38	0/0:23,0:23:30.02:0,30,273	0/0:28,0:28:36.12:0,36,558	0/0:18,0:19:30.02:0,30,436	0/0:22,0:22:18.05:0,18,257	0/0:22,0:22:57.17:0,57,841	0/0:18,0:18:21.05:0,21,287	0/0:18,0:18:27.08:0,27,398	0/0:16,0:16:18.02:0,18,168	0/0:18,0:18:26.40:0,26,231	0/0:21,0:21:45.15:0,45,676	0/0:14,0:14:27.07:0,27,377	0/0:13,0:13:21.02:0,21,195	0/0:30,0:30:38.98:0,39,479	1/1:4,14:18:27.09:634,27,0	0/0:23,0:23:14.54:0,15,232	0/0:25,0:26:42.12:0,42,604	0/0:19,0:18:30.09:0,30,461	0/0:20,0:20:27.05:0,27,418	0/0:23,0:23:30.10:0,30,465	0/0:19,0:19:33.08:0,33,467	0/0:22,0:22:30.10:0,30,465	0/0:26,0:25:21.02:0,21,196	0/0:19,0:19:15.05:0,15,231	0/0:8,0:8:18.02:0,18,166
chr10	101966289	.	TG	T	255.34	PASS	AB=0.656;AC=8;AF=0.143;AN=56;BaseQRankSum=11.618;DP=579;FS=4.140;HRun=2;HaplotypeScore=94.0856;InbreedingCoeff=-0.1548;MQ=59.15;MQ0=16;MQRankSum=-10.476;QD=2.28;ReadPosRankSum=6.491;VQSLOD=-0.6050;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:4,6:10:38.23:38,0,77	0/1:3,2:5:22.91:34,0,23	0/0:33,1:12:28.21:0,28,393	0/0:47,1:21:56.28:0,56,740	0/1:8,13:21:61.25:61,0,86	0/0:24,0:24:69.21:0,69,984	0/0:20,0:20:55.07:0,55,795	0/0:23,0:23:69.23:0,69,1011	0/0:27,0:27:81.27:0,81,1199	0/0:18,0:18:54.18:0,54,797	0/0:15,0:15:45.15:0,45,667	0/1:9,6:15:50.04:50,0,98	0/1:8,9:17:37.89:82,0,38	0/0:22,0:22:61.45:0,61,894	0/0:17,0:17:51.16:0,51,733	0/1:4,8:12:21.40:51,0,21	0/0:31,0:31:85.11:0,85,1196	0/0:20,0:19:42.05:0,42,457	0/0:17,0:17:48.16:0,48,688	0/0:28,0:28:70.12:0,70,1023	0/0:18,0:17:54.18:0,54,796	0/0:21,0:20:58.44:0,58,846	0/0:21,0:21:57.19:0,57,841	0/0:20,0:20:57.19:0,57,843	0/0:24,0:24:72.23:0,72,1044	0/1:16,8:23:23.46:23,0,253	0/0:18,0:18:54.18:0,54,795	0/1:2,6:8:14.82:51,0,15
chr10	101966292	.	ATGGATGGATGG	A	4303.42	PASS	AB=0.699;AC=9;AF=0.161;AN=56;BaseQRankSum=12.681;DP=610;FS=7.518;HRun=0;HaplotypeScore=196.7562;InbreedingCoeff=0.0679;MQ=58.02;MQ0=21;MQRankSum=-9.306;QD=33.10;ReadPosRankSum=5.482;VQSLOD=3.1676;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:5,6:11:99:239,0,179	0/1:3,2:5:32.26:154,0,32	0/0:42,0:14:39.04:0,39,701	0/0:53,0:20:45.60:0,46,1476	0/1:11,13:24:34.35:825,0,34	0/0:21,0:21:63.21:0,63,2856	0/0:21,0:21:58.50:0,58,2391	0/0:26,0:26:78.26:0,78,2680	0/0:27,0:27:81.28:0,81,4147	0/0:21,0:21:63.21:0,63,2609	0/0:15,0:15:45.15:0,45,1975	0/1:11,6:17:89.69:524,0,90	0/1:16,9:25:99:800,0,142	0/0:24,0:24:69.24:0,69,3330	0/0:16,0:16:48.16:0,48,2269	0/1:7,8:15:13.50:669,0,13	0/0:29,0:29:81.18:0,81,3201	0/0:21,0:20:45.15:0,45,1792	0/0:17,0:17:48.15:0,48,1311	0/0:27,0:27:75.26:0,75,3260	0/0:18,0:17:54.18:0,54,2523	0/0:21,0:20:58.44:0,58,2338	0/0:20,0:20:54.16:0,54,2432	0/0:21,0:21:63.21:0,63,2598	0/0:23,0:23:69.23:0,69,2888	0/1:17,8:24:99:589,0,175	0/0:16,0:16:48.16:0,48,2078	1/1:2,6:8:11.34:505,11,0
chr10	101967766	.	TA	T	672.12	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.922;DP=634;FS=1.259;HRun=10;HaplotypeScore=73.5547;InbreedingCoeff=0.9794;MQ=73.21;MQ0=0;MQRankSum=-1.667;QD=19.20;ReadPosRankSum=0.310;VQSLOD=4.4280;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:21:38:0,38,206	0/0:9,0:9:21.06:0,21,232	0/0:9,0:9:14.83:0,15,145	0/0:14,0:14:21.02:0,21,211	0/0:40,2:42:65.20:0,65,1161	0/0:33,1:34:56.40:0,56,825	0/0:13,0:13:36.08:0,36,389	0/0:27,0:27:66.11:0,66,679	0/0:21,0:21:48.11:0,48,521	0/0:35,1:36:67.19:0,67,958	0/0:27,0:27:72.15:0,72,783	0/0:24,0:24:63.10:0,63,660	0/0:35,0:35:73.46:0,73,877	0/0:23,0:23:60.15:0,60,655	0/0:33,0:33:84.20:0,84,913	0/0:16,0:16:33.07:0,33,356	0/0:27,0:27:72.19:0,72,796	0/0:7,0:7:21.02:0,21,212	0/0:23,1:24:40.13:0,40,669	0/0:26,0:26:50.39:0,50,644	0/0:18,0:18:48.13:0,48,531	0/0:23,2:25:17.10:0,17,640	0/0:22,0:22:51.08:0,51,529	0/0:16,0:16:48.09:0,48,511	0/0:12,0:12:35.77:0,36,376	1/1:3,23:26:38.78:559,39,0	0/0:37,0:37:99:0,104,1146	1/1:0,9:9:26.99:234,27,0
chr10	101967919	.	C	CT	4137.84	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-9.998;DP=557;FS=0.408;HRun=3;HaplotypeScore=52.6620;InbreedingCoeff=0.9763;MQ=92.43;MQ0=0;MQRankSum=-1.975;QD=37.96;ReadPosRankSum=2.149;VQSLOD=4.0072;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,1296	1/1:0,2:2:6.02:83,6,0	0/0:29,0:29:81.24:0,81,961	0/0:24,0:23:48.13:0,48,559	1/1:2,14:16:42.14:588,42,0	0/0:15,0:15:45.14:0,45,540	0/0:20,0:20:54.17:0,54,648	0/0:30,0:30:87.26:0,87,1036	0/0:22,0:22:66.20:0,66,792	0/0:14,0:14:39.12:0,39,468	0/0:16,0:16:48.15:0,48,576	1/1:1,26:27:75.25:1050,75,0	1/1:0,26:26:66.22:924,66,0	0/0:25,0:25:72.21:0,72,853	0/0:20,0:20:57.17:0,57,684	1/1:0,17:17:48.16:672,48,0	0/0:26,0:26:69.21:0,69,828	0/0:7,0:7:18.06:0,18,216	0/0:24,0:24:60.18:0,60,719	0/0:17,0:17:51.14:0,51,597	0/0:24,0:24:72.22:0,72,864	0/0:18,0:18:54.15:0,54,637	0/0:15,0:15:45.12:0,45,527	0/0:12,0:12:36.11:0,36,432	0/0:19,0:19:54.15:0,54,637	1/1:1,15:16:45.13:610,45,0	0/0:32,0:32:93.21:0,93,1075	1/1:0,5:5:15.05:210,15,0
chr10	101968128	.	TA	T	2898.08	PASS	AB=0.545;AC=17;AF=0.304;AN=56;BaseQRankSum=13.192;DP=539;FS=5.350;HRun=9;HaplotypeScore=54.1359;InbreedingCoeff=0.9010;MQ=73.93;MQ0=1;MQRankSum=-0.182;QD=19.71;ReadPosRankSum=4.392;VQSLOD=4.0215;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:23.32:66,23,0	1/1:2,6:8:18.01:165,18,0	0/0:11,0:11:0.50:0,1,151	0/0:11,0:10:17.71:0,18,166	1/1:0,18:18:54.03:494,54,0	0/0:19,0:19:51.15:0,51,589	0/0:13,0:13:36.11:0,36,415	0/0:38,0:38:99:0,105,1211	0/0:11,0:11:33.10:0,33,381	0/0:26,0:26:78.23:0,78,892	0/0:23,0:23:54.12:0,54,594	1/1:0,14:14:42.02:384,42,0	1/1:2,19:21:57.03:522,57,0	0/0:15,0:15:39.11:0,39,439	0/0:18,0:19:53.99:0,54,603	1/1:0,18:18:54.03:494,54,0	0/0:20,1:21:35.74:0,36,664	1/1:1,16:16:42.02:384,42,0	0/0:30,0:30:78.23:0,78,898	0/0:24,0:24:60.17:0,60,684	0/0:12,0:12:30.07:0,30,336	0/0:23,0:23:57.17:0,57,657	0/0:24,0:24:69.19:0,69,787	0/0:11,0:11:26.93:0,27,301	0/0:28,0:28:58.28:0,58,783	0/1:4,20:23:2.31:483,0,2	0/0:33,0:33:75.21:0,75,856	1/1:0,5:5:12.01:110,12,0
chr10	101968135	.	AAAC	A	623.10	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.432;DP=534;FS=2.108;HRun=0;HaplotypeScore=83.9549;InbreedingCoeff=0.9303;MQ=73.91;MQ0=1;MQRankSum=0.831;QD=28.32;ReadPosRankSum=1.134;VQSLOD=3.9321;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:45.15:718,45,0	0/0:6,0:6:18:0,18,158	0/0:8,0:8:19.87:0,20,351	0/0:11,0:11:12.18:0,12,281	0/0:20,0:20:59.99:0,60,541	0/0:18,0:18:54.19:0,54,1185	0/0:14,0:14:42.11:0,42,851	0/0:38,0:38:99:0,114,2414	0/0:13,0:13:39.10:0,39,784	0/0:29,0:29:87.27:0,87,1817	0/0:21,0:21:60.15:0,60,1125	0/0:14,0:14:41.99:0,42,370	0/0:19,0:19:56.97:0,57,497	0/0:15,0:15:45.12:0,45,895	0/0:20,0:20:56.49:0,56,1205	0/0:22,0:22:66:0,66,616	0/0:21,0:21:63.21:0,63,1361	0/0:16,0:15:45:0,45,408	0/0:30,0:30:84.28:0,84,1768	0/0:22,0:22:66.20:0,66,1360	0/0:12,0:12:33.10:0,33,690	0/0:19,0:19:57.20:0,57,1259	0/0:24,0:24:72.20:0,72,1549	0/0:12,0:12:33.04:0,33,619	0/0:26,0:26:74.27:0,74,1560	0/0:27,0:26:70.84:0,71,765	0/0:30,0:30:78.25:0,78,1679	0/0:5,0:5:12:0,12,106
chr10	101969989	.	ACATATGTG	A	267.77	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.042;DP=624;FS=16.305;HRun=0;HaplotypeScore=165.7604;InbreedingCoeff=0.9155;MQ=75.90;MQ0=4;MQRankSum=-4.634;QD=14.09;ReadPosRankSum=-2.398;VQSLOD=1.6830;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,9:18:23.92:361,24,0	0/0:3,0:3:9.03:0,9,386	0/0:24,0:20:33.11:0,33,983	0/0:27,0:23:49.64:0,50,1453	0/0:22,0:22:51.17:0,51,1975	0/0:15,0:15:39.12:0,39,1553	0/0:24,0:24:42.14:0,42,1567	0/0:33,0:33:75.26:0,75,2846	0/0:26,0:26:72.25:0,72,3061	0/0:16,0:16:45.15:0,45,1826	0/0:14,0:14:30.09:0,30,1154	0/0:20,0:20:48.15:0,48,1638	0/0:19,0:18:48.16:0,48,2025	0/0:31,0:31:81.28:0,81,3409	0/0:21,0:21:54.19:0,54,2242	0/0:36,0:36:93.32:0,93,3804	0/0:29,0:29:72.23:0,72,2813	0/0:17,0:17:45.15:0,45,1837	0/0:18,0:18:39.12:0,39,1288	0/0:25,0:25:63.22:0,63,2607	0/0:29,0:29:80.79:0,81,3339	0/0:22,0:22:66.23:0,66,2646	0/0:19,0:19:38.93:0,39,1357	0/0:32,0:32:72.25:0,72,2785	0/0:22,0:22:54.19:0,54,2149	0/0:22,0:22:48.16:0,48,1728	0/0:30,0:30:84.29:0,84,3378	0/0:6,0:6:12.04:0,12,426
chr10	101970009	.	TCA	T	325.61	PASS	AB=0.938;AC=17;AF=0.327;AN=52;BaseQRankSum=4.906;DP=627;FS=16.825;HRun=0;HaplotypeScore=94.8799;InbreedingCoeff=-0.3118;MQ=61.17;MQ0=14;MQRankSum=-2.156;QD=0.96;ReadPosRankSum=0.085;VQSLOD=0.4351;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:7.41:0,7,65	0/1:6,0:6:32.47:32,0,78	./.	./.	0/1:25,0:25:36.82:37,0,340	0/1:14,2:16:45.40:45,0,159	0/1:10,1:25:9.17:9,0,163	0/0:33,0:33:1.07:0,1,150	0/0:25,0:27:11.85:0,12,507	0/1:19,1:20:0.10:0,0,371	0/0:6,0:6:5.82:0,6,33	0/1:14,0:14:1.20:1,0,164	0/0:21,0:19:24.08:0,24,357	0/1:33,3:36:3.17:3,0,728	0/1:25,3:28:54.46:54,0,490	0/0:27,0:27:23.36:0,23,512	0/1:26,4:31:74.48:74,0,367	0/0:16,0:22:33.60:0,34,343	0/0:10,0:11:0.89:0,1,146	0/1:20,1:23:14.37:14,0,291	0/0:33,0:33:6.40:0,6,550	0/0:23,1:24:0.01:0,0,350	0/1:15,3:17:12.11:12,0,224	0/1:26,2:28:6.32:6,0,419	0/1:14,0:14:13.03:13,0,115	0/1:20,0:21:3.11:76,0,3	0/1:27,3:30:54.04:54,0,465	1/1:5,0:5:5.68:28,6,0
chr10	101970041	.	ACACACACC	A	1137.22	PASS	AB=0.947;AC=9;AF=0.161;AN=56;BaseQRankSum=4.468;DP=684;FS=9.280;HRun=0;HaplotypeScore=174.3822;InbreedingCoeff=0.0793;MQ=62.06;MQ0=19;MQRankSum=-0.506;QD=7.58;ReadPosRankSum=-0.966;VQSLOD=1.9782;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:20:2.02:2,0,228	0/1:6,0:6:29.86:30,0,291	0/0:31,0:17:50.01:0,50,612	0/0:32,0:15:41.74:0,42,585	0/1:30,0:30:99:112,0,1240	0/0:17,0:17:48.09:0,48,1321	0/0:25,0:25:43.52:0,44,1213	0/0:31,0:31:84.42:0,84,1403	0/0:29,0:29:77.86:0,78,2279	0/0:24,0:24:64.32:0,64,1839	0/0:18,0:18:48.08:0,48,932	0/1:16,0:16:57.67:58,0,678	0/1:19,0:17:49.66:50,0,1011	0/0:34,0:34:96.24:0,96,3149	0/0:31,0:31:86.83:0,87,2493	0/1:23,0:23:55.77:56,0,1399	0/0:32,0:32:84.07:0,84,1991	0/0:21,0:21:45.23:0,45,1622	0/0:18,0:18:44.17:0,44,948	0/0:31,0:31:81.62:0,82,2081	0/0:41,0:41:99:0,111,2683	0/0:26,0:26:75.67:0,76,2045	0/0:24,0:23:53.95:0,54,1436	0/0:30,0:30:81.14:0,81,2360	0/0:15,0:15:41.45:0,41,851	0/1:9,13:21:99:750,0,172	0/0:24,0:24:66.96:0,67,2135	1/1:2,5:7:12:220,12,0
chr10	101970047	.	ACC	A	1259.23	PASS	AB=0.933;AC=9;AF=0.161;AN=56;BaseQRankSum=7.521;DP=658;FS=26.506;HRun=4;HaplotypeScore=99.6863;InbreedingCoeff=0.0815;MQ=65.77;MQ0=14;MQRankSum=-2.162;QD=8.99;ReadPosRankSum=1.703;VQSLOD=-0.5604;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:18:2.05:2,0,55	0/1:5,2:7:23.04:133,0,23	0/0:25,0:17:47.94:0,48,489	0/0:27,0:16:44.70:0,45,461	0/1:26,3:29:97.18:407,0,97	0/0:16,0:16:25.57:0,26,362	0/0:26,0:26:42.36:0,42,482	0/0:32,0:32:71.23:0,71,738	0/0:27,0:27:62.90:0,63,889	0/0:21,0:21:46.75:0,47,595	0/0:18,0:18:46.81:0,47,401	0/1:14,1:15:23.56:217,0,24	0/1:17,1:16:99:126,0,165	0/0:37,0:37:84.10:0,84,1270	0/0:30,0:30:64.49:0,64,956	0/1:20,0:20:99:141,0,178	0/0:32,0:32:64.54:0,65,871	0/0:19,0:20:40.52:0,41,591	0/0:18,0:18:50.02:0,50,529	0/0:28,0:28:66.89:0,67,732	0/0:41,0:41:99:0,105,1142	0/0:27,0:27:41.10:0,41,753	0/0:24,0:23:43.50:0,44,558	0/0:29,0:29:73.84:0,74,959	0/0:15,0:15:38.42:0,38,411	0/1:19,0:18:26.37:277,0,26	0/0:25,0:25:38.72:0,39,739	1/1:7,0:7:11.97:97,12,0
chr10	101970514	.	AT	A	774.25	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.677;DP=631;FS=5.686;HRun=8;HaplotypeScore=66.9673;InbreedingCoeff=0.9733;MQ=74.50;MQ0=0;MQRankSum=0.887;QD=19.36;ReadPosRankSum=1.752;VQSLOD=3.5584;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,36:40:90.13:869,90,0	0/0:12,0:12:33.09:0,33,380	0/0:12,0:12:21:0,21,229	0/0:10,0:10:13.79:0,14,161	0/0:31,0:31:87.26:0,87,1040	0/0:19,0:19:48.13:0,48,560	0/0:23,0:23:60.18:0,60,721	0/0:26,0:26:75.22:0,75,895	0/0:23,0:23:66.19:0,66,788	0/0:22,0:22:57.17:0,57,679	0/0:27,0:27:78.24:0,78,941	0/0:16,0:16:42.12:0,42,497	0/0:11,0:11:27.08:0,27,326	0/0:28,0:28:81.24:0,81,965	0/0:17,0:18:51.01:0,51,582	0/0:22,0:22:66.20:0,66,789	0/0:22,0:22:60.15:0,60,698	0/0:18,0:18:51.14:0,51,602	0/0:31,0:31:90.25:0,90,1057	0/0:34,0:34:96.27:0,96,1137	0/0:11,0:11:27.08:0,27,326	0/0:20,0:20:57.15:0,57,666	0/0:34,0:34:96.23:0,96,1131	0/0:15,0:15:39.11:0,39,461	0/0:26,0:26:69.21:0,69,834	0/0:31,0:31:84.23:0,84,983	0/0:36,0:36:99:0,108,1292	0/0:13,0:13:36.09:0,36,422
chr10	101970616	.	A	AC	471.53	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.213;DP=641;FS=7.103;HRun=6;HaplotypeScore=70.3846;InbreedingCoeff=0.7794;MQ=91.74;MQ0=0;MQRankSum=-2.125;QD=23.58;ReadPosRankSum=0.115;VQSLOD=3.1212;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:84.19:0,84,857	0/0:2,0:2:6.01:0,6,61	0/0:28,0:28:65.28:0,65,624	0/0:26,0:26:46.23:0,46,474	0/0:32,0:32:90.18:0,90,906	0/0:32,0:32:81.18:0,81,825	0/0:27,0:27:69.12:0,69,689	0/0:24,0:24:60.13:0,60,607	0/0:16,0:16:48.11:0,48,489	0/0:20,0:20:48.10:0,48,489	0/0:23,0:23:57.11:0,57,574	0/0:29,0:29:81.18:0,81,826	0/0:24,0:24:72.16:0,72,734	0/0:21,0:21:60.12:0,60,605	0/0:22,0:22:60.13:0,60,612	0/0:17,0:17:48.09:0,48,483	0/0:24,0:24:63.12:0,63,635	1/1:3,17:20:45.14:566,45,0	0/0:20,0:20:48.10:0,48,489	0/0:34,0:34:93.21:0,93,948	0/0:24,0:24:69.16:0,69,704	0/0:19,0:19:51.11:0,51,514	0/0:32,0:32:87.09:0,87,851	0/0:23,0:23:66.15:0,66,671	0/0:14,0:14:39.09:0,39,397	0/0:24,0:24:69.15:0,69,703	0/0:30,0:30:84.18:0,84,855	0/0:1,0:1:3.01:0,3,31
chr10	101972041	.	GA	G	1113.77	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.548;DP=773;FS=14.951;HRun=6;HaplotypeScore=89.4876;InbreedingCoeff=0.9959;MQ=83.73;MQ0=1;MQRankSum=-3.259;QD=22.73;ReadPosRankSum=0.838;VQSLOD=2.1752;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,42:49:99:1209,114,0	0/0:16,0:16:45.15:0,45,592	0/0:23,0:23:60.16:0,60,749	0/0:21,0:21:39.29:0,39,558	0/0:28,0:28:78.25:0,78,1014	0/0:28,0:28:75.24:0,75,987	0/0:17,0:17:51.13:0,51,652	0/0:40,0:40:99:0,108,1397	0/0:34,0:34:93.28:0,93,1196	0/0:26,0:26:75.24:0,75,980	0/0:23,0:23:63.20:0,63,817	0/0:29,0:29:84.27:0,84,1100	0/0:40,0:40:99:0,120,1551	0/0:35,0:35:99:0,102,1325	0/0:34,0:34:96.31:0,96,1263	0/0:34,0:34:93.30:0,93,1224	0/0:27,0:27:78.23:0,78,1008	0/0:27,0:27:69.22:0,69,905	0/0:28,0:28:78.25:0,78,1014	0/0:24,0:24:66.21:0,66,860	0/0:34,0:33:99:0,99,1302	0/0:26,0:26:69.22:0,69,907	0/0:25,0:25:72.22:0,72,932	0/0:24,0:24:66.21:0,66,866	0/0:22,0:22:57.16:0,57,729	0/0:32,0:32:90.29:0,90,1184	0/0:20,0:20:54.18:0,54,710	0/0:7,0:7:21.07:0,21,276
chr10	101973962	.	ACCT	A	7449.93	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=17.533;DP=576;FS=2.014;HRun=0;HaplotypeScore=105.3957;InbreedingCoeff=0.9145;MQ=64.50;MQ0=0;MQRankSum=-3.240;QD=40.05;ReadPosRankSum=4.588;VQSLOD=5.6653;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:35:36.45:1227,36,0	1/1:1,6:7:18.06:294,18,0	0/1:8,0:8:1.02:1,0,197	0/0:6,0:6:14.84:0,15,281	1/1:1,29:30:78.27:1273,78,0	0/0:31,0:31:75.26:0,75,1617	0/0:15,0:15:42.14:0,42,892	0/0:23,0:23:66.23:0,66,1475	0/0:23,0:23:60.21:0,60,1269	0/0:28,0:27:84.28:0,84,1806	0/0:15,0:15:42.14:0,42,937	1/1:2,21:23:57.19:926,57,0	1/1:0,20:20:51.07:832,51,0	0/0:20,0:20:51.18:0,51,1139	0/0:17,0:17:51.17:0,51,1118	1/1:1,19:20:57.19:931,57,0	0/0:24,0:23:66.23:0,66,1452	0/0:21,0:21:54.18:0,54,1176	0/0:22,0:22:63.20:0,63,1281	0/0:20,0:20:60.21:0,60,1308	0/0:16,0:16:45.15:0,45,988	0/0:23,0:23:66.21:0,66,1381	0/0:23,0:23:57.19:0,57,1192	0/0:17,0:17:51.17:0,51,1117	0/0:22,0:22:60.21:0,60,1313	1/1:1,22:23:2.16:986,2,0	0/0:24,0:24:72.25:0,72,1564	1/1:0,20:20:60.20:980,60,0
chr10	101974364	.	C	CA	10818.06	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-1.313;DP=335;FS=4.904;HRun=1;HaplotypeScore=155.9010;InbreedingCoeff=0.4391;MQ=44.74;MQ0=0;MQRankSum=-1.033;QD=32.49;ReadPosRankSum=-0.160;VQSLOD=4.2677;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:59.69:581,60,0	1/1:0,3:3:8.96:107,9,0	0/0:2,0:2:2.70:0,3,7	0/1:9,0:8:6.96:12,0,7	1/1:0,10:10:11.87:80,12,0	1/1:2,17:19:51.17:757,51,0	1/1:0,10:10:27.09:397,27,0	1/1:1,13:14:39.13:582,39,0	1/1:0,8:8:24.08:358,24,0	1/1:0,14:14:42.14:627,42,0	1/1:1,19:20:51.09:706,51,0	1/1:1,11:12:27.05:355,27,0	1/1:3,12:15:45.05:592,45,0	1/1:3,10:13:33.10:466,33,0	1/1:0,9:9:27.09:398,27,0	1/1:5,10:15:41.90:536,42,0	1/1:2,9:11:24.07:340,24,0	1/1:2,8:10:27.08:384,27,0	1/1:1,4:5:15.05:221,15,0	1/1:1,10:11:29.79:249,30,0	1/1:4,10:14:20.93:201,21,0	1/1:2,9:11:30.04:403,30,0	1/1:1,12:13:30:378,30,0	1/1:2,20:22:27.72:406,28,0	1/1:1,21:22:57.11:797,57,0	1/1:1,9:10:30.08:426,30,0	1/1:2,7:9:24.04:326,24,0	1/1:0,3:3:9.03:134,9,0
chr10	101974910	.	TAGACTTCAGCAGGAGGTAG	T	8521.85	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.021;DP=677;FS=4.948;HRun=0;HaplotypeScore=336.6539;InbreedingCoeff=0.9868;MQ=88.66;MQ0=0;MQRankSum=-11.663;QD=102.67;ReadPosRankSum=2.805;VQSLOD=3.9868;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,184,14905	1/1:2,6:8:12.04:643,12,0	0/0:30,0:30:84.21:0,84,5079	0/0:24,0:24:57.19:0,57,3552	1/1:4,6:10:18.06:806,18,0	0/0:19,0:19:57.20:0,57,5208	0/0:28,0:28:78.27:0,78,6405	0/0:23,0:23:66.23:0,66,5053	0/0:23,0:23:63.22:0,63,5235	0/0:17,0:17:48.16:0,48,3501	0/0:24,0:24:66.68:0,67,4756	1/1:4,23:27:60.21:3214,60,0	1/1:2,12:14:33.11:1768,33,0	0/0:24,0:24:69.24:0,69,5992	0/0:41,0:41:99:0,123,10073	1/1:10,14:24:39.13:2090,39,0	0/0:35,0:35:99:0,99,8424	0/0:28,0:28:84.29:0,84,7130	0/0:6,0:6:15.04:0,15,720	0/0:27,0:27:69.24:0,69,5190	0/0:31,0:31:84.27:0,84,6592	0/0:20,0:20:57.20:0,57,4683	0/0:25,0:25:75.26:0,75,6511	0/0:33,0:33:93.30:0,93,7430	0/0:12,0:12:33.11:0,33,2469	0/0:23,0:23:63.20:0,63,5055	0/0:29,0:29:87.28:0,87,7084	0/0:9,0:9:27.09:0,27,2343
chr10	101976984	.	A	ATATT	3130.96	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.001;DP=489;FS=1.200;HRun=0;HaplotypeScore=76.7053;InbreedingCoeff=0.9409;MQ=62.22;MQ0=1;MQRankSum=-5.447;QD=46.04;ReadPosRankSum=-3.168;VQSLOD=2.9187;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:89.30:0,89,1479	0/0:14,0:14:33.11:0,33,574	0/0:13,0:10:23.95:0,24,383	0/0:16,0:16:42.10:0,42,650	0/0:28,0:28:81.20:0,81,1343	0/0:22,0:22:63.21:0,63,1076	0/0:14,0:14:42.14:0,42,747	1/1:8,15:25:51.05:1002,51,0	0/0:9,0:9:24.07:0,24,399	0/0:32,0:32:84.28:0,84,1471	0/0:31,0:31:81.25:0,81,1364	0/0:16,0:16:42.10:0,42,655	0/0:15,0:15:33.11:0,33,574	0/0:19,0:19:54.18:0,54,951	0/0:11,0:11:30.09:0,30,505	0/0:10,0:10:24.06:0,24,371	0/0:28,0:28:66.20:0,66,1124	0/0:13,0:13:30.10:0,30,534	1/1:2,7:9:21.03:433,21,0	1/1:2,19:21:57.08:1259,57,0	1/1:1,0:1:3.01:65,3,0	0/0:5,0:5:9.03:0,9,160	0/0:14,0:14:33.09:0,33,554	0/0:11,0:11:30.10:0,30,534	0/0:28,0:28:75.24:0,75,1301	0/0:21,0:20:57.20:0,57,1014	1/1:3,8:11:21.07:539,21,0	0/0:15,0:14:36.12:0,36,634
chr10	101978530	.	A	AT	5208.88	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-12.930;DP=619;FS=0.346;HRun=7;HaplotypeScore=58.0837;InbreedingCoeff=0.9061;MQ=68.64;MQ0=0;MQRankSum=-0.420;QD=28.16;ReadPosRankSum=-2.064;VQSLOD=4.6676;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:26:61.43:728,61,0	0/0:11,0:11:30.05:0,30,289	0/0:14,0:14:39.04:0,39,370	0/1:9,0:8:19.31:19,0,106	0/0:31,0:31:75.10:0,75,717	0/0:27,0:27:75.12:0,75,724	0/0:16,0:16:39.06:0,39,376	1/1:7,27:34:78.21:919,78,0	0/0:17,0:17:39.04:0,39,370	0/0:29,0:29:75.10:0,75,716	0/0:18,0:18:48.07:0,48,463	0/0:14,0:14:42.07:0,42,405	0/0:22,0:22:63.10:0,63,608	0/0:28,0:28:78.12:0,78,753	0/0:30,0:30:87.13:0,87,835	0/0:25,0:25:72.12:0,72,695	0/0:31,0:31:78.11:0,78,752	1/1:1,16:17:45.14:544,45,0	1/1:5,25:30:75.21:893,75,0	1/1:3,37:40:99:1288,108,0	1/1:0,5:5:15.05:181,15,0	0/0:27,0:27:69.10:0,69,665	0/0:25,0:25:72.11:0,72,695	0/0:10,0:10:27.04:0,27,261	0/0:29,0:29:78.09:0,78,742	0/0:23,0:23:60.09:0,60,579	1/1:4,20:24:54.13:637,54,0	0/0:7,0:7:21.03:0,21,203
chr10	101978805	.	TCACACACACACACACACACACACACACACACACA	T	784.19	PASS	AC=6;AF=0.120;AN=50;BaseQRankSum=2.481;DP=450;FS=3.230;HRun=0;HaplotypeScore=239.2307;InbreedingCoeff=0.7446;MQ=38.90;MQ0=80;MQRankSum=-2.108;QD=12.65;ReadPosRankSum=-0.457;VQSLOD=2.6979;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:17:9.90:0,10,218	0/0:8,0:7:12.04:0,12,1267	./.	./.	0/0:16,0:16:9.03:0,9,932	0/0:22,0:19:18.40:0,18,823	0/0:18,0:14:9.92:0,10,514	1/1:18,0:15:17.98:201,18,0	0/0:22,0:18:21.07:0,21,1825	0/0:17,0:16:28.87:0,29,2240	0/0:15,0:13:9.03:0,9,1051	0/0:15,0:12:6.02:0,6,164	0/0:15,0:12:21.07:0,21,1296	0/0:14,0:13:6.02:0,6,520	0/0:18,0:16:22.63:0,23,1440	0/0:19,0:14:18.05:0,18,983	0/0:20,0:16:15.52:0,16,1221	0/0:16,0:10:18.02:0,18,789	1/1:12,7:14:24.04:529,24,0	0/0:8,1:11:1.25:0,1,3	./.	0/0:16,0:15:18.53:0,19,1654	0/0:10,0:11:5.26:0,5,324	0/0:33,0:25:39.58:0,40,2906	0/0:12,0:11:15.05:0,15,1396	0/0:13,0:11:9.50:0,10,831	1/1:25,0:20:18.13:188,18,0	0/0:10,0:7:18.06:0,18,2096
chr10	101978824	.	CA	C	258.27	PASS	AB=0.938;AC=5;AF=0.100;AN=50;BaseQRankSum=3.229;DP=464;FS=2.054;HRun=1;HaplotypeScore=78.2056;InbreedingCoeff=0.5685;MQ=39.19;MQ0=98;MQRankSum=-5.842;QD=5.50;ReadPosRankSum=-0.988;VQSLOD=0.1569;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:26:34.65:0,35,404	0/0:11,0:10:15.95:0,16,144	./.	./.	0/0:10,0:10:6.81:0,7,30	0/0:21,0:17:23.94:0,24,277	0/0:19,0:15:20.90:0,21,240	1/1:12,1:8:17.77:141,18,0	0/0:21,0:17:31.73:0,32,345	0/0:15,0:14:33.35:0,33,316	0/0:15,0:14:20.93:0,21,249	0/0:16,0:11:12.04:0,12,150	0/0:17,0:13:28.37:0,28,261	0/0:13,0:12:10.96:0,11,120	0/0:15,0:12:22.27:0,22,216	0/0:15,0:10:20.35:0,20,241	0/0:22,0:17:23.52:0,24,228	0/0:17,0:9:24.08:0,24,313	0/1:14,1:10:29.73:86,0,30	0/0:12,0:10:2.98:0,3,21	./.	0/0:17,0:16:25.18:0,25,270	0/0:15,0:13:15.02:0,15,174	0/0:40,0:31:60.39:0,60,657	0/0:17,0:15:21.15:0,21,171	0/0:16,0:14:33.11:0,33,428	1/1:16,3:14:3.28:145,3,0	0/0:13,0:9:26.91:0,27,314
chr10	101978826	.	CA	C	404.79	PASS	AB=0.933;AC=5;AF=0.100;AN=50;BaseQRankSum=2.841;DP=467;FS=0.915;HRun=1;HaplotypeScore=75.0008;InbreedingCoeff=0.6905;MQ=39.34;MQ0=99;MQRankSum=-5.413;QD=8.80;ReadPosRankSum=-1.766;VQSLOD=0.3902;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:26:36.05:0,36,413	0/0:10,0:9:15.95:0,16,144	./.	0/0:4,0:1:3.01:0,3,37	0/0:12,0:12:9.81:0,10,55	0/0:20,0:17:23.93:0,24,264	0/0:19,0:15:23.91:0,24,277	1/1:9,4:6:17.98:201,18,0	0/0:21,0:17:31.73:0,32,345	0/0:14,0:13:30.59:0,31,283	0/0:14,0:13:20.93:0,21,251	0/0:16,0:11:12.04:0,12,151	0/0:17,0:13:28.37:0,28,261	0/0:14,0:13:13.96:0,14,144	0/0:15,0:12:19.27:0,19,180	0/0:15,0:10:20.34:0,20,230	0/0:23,0:18:26.53:0,27,265	0/0:17,0:9:24.03:0,24,293	0/1:13,1:9:9.68:134,0,10	./.	./.	0/0:18,0:17:28.19:0,28,307	0/0:14,0:12:15.05:0,15,190	0/0:41,0:32:63.34:0,63,662	0/0:17,0:15:21.16:0,21,173	0/0:16,0:14:36.12:0,36,463	1/1:9,10:14:21.07:194,21,0	0/0:13,0:9:23.94:0,24,294
chr10	101979712	.	TTC	T	3528.67	PASS	AB=0.693;AC=15;AF=0.278;AN=54;BaseQRankSum=10.260;DP=568;FS=7.239;HRun=0;HaplotypeScore=72.5757;InbreedingCoeff=0.6852;MQ=67.51;MQ0=4;MQRankSum=0.619;QD=21.78;ReadPosRankSum=4.380;VQSLOD=3.6753;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:16:39.12:480,39,0	1/1:1,6:7:15.05:185,15,0	0/0:17,0:13:19.35:0,19,246	0/0:22,0:17:23.97:0,24,310	1/1:2,28:29:63.20:776,63,0	0/0:21,1:22:29.41:0,29,960	0/0:28,1:29:35.25:0,35,1007	0/0:37,0:36:59.90:0,60,628	0/0:16,1:17:2.21:0,2,550	0/0:19,0:19:45.15:0,45,735	0/0:27,0:27:57.19:0,57,923	1/1:4,16:20:38.95:457,39,0	1/1:2,17:20:44.97:531,45,0	0/1:11,1:12:6.84:7,0,410	0/0:21,0:20:45.13:0,45,677	0/1:7,17:23:52.76:435,0,53	0/0:32,0:32:78.23:0,78,1222	0/0:19,0:19:54.16:0,54,855	0/0:17,0:16:32.91:0,33,318	0/0:23,0:25:8.26:0,8,63	./.	0/0:12,0:12:27.09:0,27,428	0/0:22,0:22:48.16:0,48,768	0/0:15,0:15:42.13:0,42,660	0/0:20,1:21:11.20:0,11,647	0/1:4,12:16:55.81:400,0,56	0/0:20,0:20:29.93:0,30,335	1/1:3,12:14:21.07:259,21,0
chr10	101979843	.	T	TAA	1494.20	PASS	AB=0.900;AC=21;AF=0.375;AN=56;BaseQRankSum=0.751;DP=475;FS=10.508;HRun=14;HaplotypeScore=73.4891;InbreedingCoeff=0.4797;MQ=66.74;MQ0=8;MQRankSum=0.156;QD=6.64;ReadPosRankSum=-0.829;VQSLOD=-0.4634;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,25:33:35.42:417,35,0	1/1:3,0:6:2.37:8,2,0	0/1:18,1:10:12.57:55,0,13	0/0:15,0:11:13.78:0,14,93	1/1:8,15:24:19.78:343,20,0	0/0:19,0:25:27.77:0,28,295	0/0:13,0:16:20.50:0,20,162	0/0:24,0:22:30.94:0,31,191	0/0:11,0:12:26.66:0,27,212	0/0:16,0:16:31.72:0,32,240	0/0:12,0:15:17.27:0,17,162	1/1:5,8:13:6.02:79,6,0	1/1:3,7:10:6.02:78,6,0	0/0:9,0:9:14.85:0,15,124	0/0:19,0:21:0.32:0,0,139	1/1:5,14:22:28.52:351,29,0	0/0:21,0:22:50.54:0,51,410	0/1:4,0:23:16.18:38,0,16	0/1:16,0:16:23.07:23,0,46	0/0:14,0:14:5.59:0,6,91	0/1:14,0:13:8.93:9,0,54	0/0:8,0:8:11.94:0,12,100	0/1:7,0:7:2.76:3,0,123	0/0:16,0:19:35.33:0,35,269	0/0:19,0:19:31.65:0,32,271	1/1:11,0:18:4.10:214,4,0	0/0:10,0:10:6.08:0,6,51	1/1:11,0:15:6.48:58,6,0
chr10	101980029	.	TTA	T	1695.36	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=3.938;DP=317;FS=3.722;HRun=0;HaplotypeScore=44.5484;InbreedingCoeff=0.7833;MQ=54.32;MQ0=8;MQRankSum=-1.712;QD=20.93;ReadPosRankSum=0.066;VQSLOD=3.3990;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:38.17:0,38,295	0/0:7,0:7:20.56:0,21,269	0/0:2,0:1:2.74:0,3,12	./.	0/0:19,0:19:54.10:0,54,831	0/0:22,0:20:51.35:0,51,864	0/0:6,0:6:15.01:0,15,259	1/1:2,17:17:50.91:621,51,0	0/0:4,0:4:8.98:0,9,138	0/0:14,0:14:42.03:0,42,571	0/0:10,0:10:30.05:0,30,472	0/0:10,0:10:30.08:0,30,509	0/0:10,0:10:30.01:0,30,428	0/0:5,0:5:9.02:0,9,128	0/0:12,0:11:27.09:0,27,501	0/0:9,0:9:27.06:0,27,433	0/0:21,0:20:56.84:0,57,874	0/0:16,0:16:17.66:0,18,233	1/1:4,15:18:44.89:542,45,0	1/1:1,5:6:14.89:157,15,0	1/1:1,2:3:5.93:64,6,0	0/0:2,0:2:6.02:0,6,110	0/0:4,0:4:12.03:0,12,200	0/0:2,0:2:2.99:0,3,24	0/0:20,0:19:54.06:0,54,791	0/0:21,0:19:42.78:0,43,305	1/1:3,14:16:32.19:474,32,0	0/1:16,0:14:0.41:0,0,58
chr10	101980030	.	TA	T	490.74	PASS	AB=0.588;AC=15;AF=0.288;AN=52;BaseQRankSum=8.060;DP=325;FS=1.167;HRun=14;HaplotypeScore=45.2803;InbreedingCoeff=0.7118;MQ=54.08;MQ0=8;MQRankSum=-0.441;QD=4.02;ReadPosRankSum=1.698;VQSLOD=-0.1450;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:19:30.15:196,30,0	0/0:7,1:8:0.10:0,0,105	0/0:3,0:1:2.98:0,3,21	./.	0/0:17,0:19:32.75:0,33,280	0/0:22,0:20:47.80:0,48,413	0/0:6,0:6:12.01:0,12,111	1/1:21,0:19:32.02:141,32,0	0/0:4,0:4:8.95:0,9,74	0/0:13,0:14:23.84:0,24,193	0/0:9,1:10:6.12:0,6,182	0/0:10,0:10:23.87:0,24,204	0/0:10,0:10:23.56:0,24,200	0/0:5,0:5:4.82:0,5,33	0/0:12,0:12:29.95:0,30,260	0/0:10,0:10:21.01:0,21,190	0/0:21,0:20:41.79:0,42,372	0/0:4,0:17:17.27:0,17,110	1/1:19,0:18:9.90:70,10,0	1/1:7,0:6:9.67:43,10,0	1/1:3,0:3:2.59:10,3,0	0/0:2,0:2:5.37:0,5,36	0/0:4,0:4:8.93:0,9,69	./.	0/0:21,0:20:33.69:0,34,300	0/1:6,0:18:7.43:42,0,7	1/1:17,0:16:28.25:110,28,0	1/1:6,1:14:15.18:56,15,0
chr10	101980747	.	CAT	C	543.52	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.423;DP=726;FS=2.115;HRun=0;HaplotypeScore=85.3743;InbreedingCoeff=0.9906;MQ=79.43;MQ0=0;MQRankSum=-1.803;QD=36.23;ReadPosRankSum=0.761;VQSLOD=5.7470;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,2384	0/0:6,0:6:18.06:0,18,348	0/0:16,0:16:42.14:0,42,767	0/0:17,0:17:31.02:0,31,779	0/0:24,0:24:66.21:0,66,1240	0/0:24,0:24:72.23:0,72,1347	0/0:27,0:27:81.26:0,81,1517	0/0:40,0:40:99:0,117,2252	0/0:27,0:27:78.27:0,78,1466	0/0:37,0:37:99:0,111,2145	0/0:28,0:28:84.29:0,84,1606	0/0:33,0:33:99:0,99,1845	0/0:43,0:43:99:0,126,2432	0/0:31,0:31:93.29:0,93,1685	0/0:31,0:31:93.31:0,93,1740	0/0:29,0:29:87.30:0,87,1671	0/0:31,0:31:93.32:0,93,1796	1/1:0,15:15:45.15:638,45,0	0/0:24,0:24:69.24:0,69,1317	0/0:25,0:25:75.24:0,75,1390	0/0:14,0:14:42.13:0,42,761	0/0:24,0:24:72.21:0,72,1279	0/0:24,0:24:72.25:0,72,1391	0/0:18,0:18:54.19:0,54,1043	0/0:21,0:21:63.22:0,63,1217	0/0:35,0:35:99:0,102,1952	0/0:31,0:31:93.32:0,93,1757	0/0:9,0:9:27.09:0,27,521
chr10	101981160	.	AACACACACACACAC	A	879.07	PASS	AB=0.823;AC=14;AF=0.259;AN=54;BaseQRankSum=6.244;DP=547;FS=5.608;HRun=0;HaplotypeScore=194.0093;InbreedingCoeff=0.6096;MQ=57.24;MQ0=19;MQRankSum=-4.168;QD=6.23;ReadPosRankSum=-1.169;VQSLOD=2.3313;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:26:24.06:0,24,550	1/1:2,1:5:6.02:215,6,0	0/0:25,0:10:0.89:0,1,2	./.	1/1:10,10:20:8.90:61,9,0	0/0:14,0:14:21.07:0,21,1066	0/0:17,0:17:12.04:0,12,528	0/0:12,0:12:18.03:0,18,380	0/0:16,0:16:24.05:0,24,888	0/0:27,0:27:39.13:0,39,2024	0/0:18,0:19:29.23:0,29,1715	1/1:5,10:16:8.89:225,9,0	1/1:9,14:23:5.42:150,5,0	0/0:10,0:10:18.06:0,18,727	0/0:28,0:28:48.16:0,48,2612	1/1:18,8:25:1.10:74,1,0	0/0:28,0:29:53.87:0,54,2785	0/1:24,0:22:24.51:25,0,51	0/0:12,0:12:21.07:0,21,1014	0/0:13,0:16:18.04:0,18,831	0/0:31,0:30:32.87:0,33,1063	0/0:12,0:16:18.05:0,18,825	0/0:16,0:15:17.17:0,17,792	0/0:33,0:34:48.14:0,48,2564	0/0:12,0:14:21.07:0,21,1217	0/1:9,0:20:99:189,0,131	0/0:13,0:14:11.76:0,12,593	1/1:6,0:7:3.01:98,3,0
chr10	101983416	.	A	AAC	1277.28	PASS	AB=0.872;AC=12;AF=0.222;AN=54;BaseQRankSum=-1.540;DP=645;FS=3.644;HRun=0;HaplotypeScore=122.6770;InbreedingCoeff=0.4005;MQ=67.71;MQ0=12;MQRankSum=-0.983;QD=6.26;ReadPosRankSum=-1.168;VQSLOD=3.2870;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,10:49:93.54:610,0,94	0/0:7,0:7:8.09:0,8,94	0/0:26,0:19:2.98:0,3,21	./.	0/0:23,0:22:25.70:0,26,265	0/0:18,0:18:14.13:0,14,119	0/0:37,0:39:43.75:0,44,397	1/1:20,0:19:5.81:36,6,0	0/0:25,0:26:53.10:0,53,506	0/0:18,0:16:20.55:0,21,218	0/0:10,0:14:17.08:0,17,134	0/1:19,0:19:29.70:30,0,190	0/0:16,0:18:23.37:0,23,190	0/0:26,0:25:39.77:0,40,370	0/0:17,0:18:29.87:0,30,286	0/0:25,0:25:4.42:0,4,296	0/0:23,0:24:13.08:0,13,271	1/1:13,14:28:13.90:318,14,0	0/0:16,0:19:11.12:0,11,52	0/0:3,0:10:5.68:0,6,28	0/0:54,0:56:25.93:0,26,358	0/1:18,0:21:9.19:9,0,275	0/0:15,0:14:16.11:0,16,111	0/1:19,19:40:74.36:154,0,74	0/0:12,0:16:17.88:0,18,177	1/1:20,0:20:23.93:229,24,0	0/0:14,0:15:2.30:0,2,111	1/1:7,0:7:5.51:49,6,0
chr10	101983441	.	A	ACG	545.87	PASS	AB=0.908;AC=8;AF=0.143;AN=56;BaseQRankSum=3.549;DP=698;FS=1.897;HRun=0;HaplotypeScore=134.4473;InbreedingCoeff=-0.1403;MQ=53.47;MQ0=16;MQRankSum=-0.110;QD=2.49;ReadPosRankSum=5.430;VQSLOD=2.4252;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:56,0:56:99:171,0,487	0/0:5,0:6:11.15:0,11,66	0/1:8,0:5:1.01:1,0,98	0/0:17,0:9:17.05:0,17,191	0/0:22,0:21:35.51:0,36,190	0/0:16,0:15:29.98:0,30,314	0/0:41,0:41:99:0,103,1065	0/0:35,0:32:88.58:0,89,641	0/0:26,0:26:71.85:0,72,867	0/0:20,0:18:50.24:0,50,559	0/0:22,0:20:41.96:0,42,409	0/1:25,0:25:13.41:13,0,80	0/0:18,0:18:8.47:0,8,108	0/0:30,0:29:68.85:0,69,785	0/0:19,0:19:45.05:0,45,551	0/1:27,0:27:13.05:13,0,110	0/0:24,0:24:59.62:0,60,624	0/1:27,0:27:84.43:84,0,226	0/0:21,0:19:44.52:0,45,329	0/0:15,0:15:20.94:0,21,168	0/0:70,0:68:99:0,130,1269	0/0:23,0:23:42.89:0,43,659	0/0:16,0:15:36.02:0,36,371	0/1:47,0:47:7.95:8,0,448	0/0:17,0:17:36:0,36,398	0/1:5,17:22:37.88:328,0,38	0/0:21,0:21:51.21:0,51,481	0/1:4,3:7:12.31:54,0,12
chr10	101983452	.	CACAT	C	924.98	PASS	AB=0.970;AC=7;AF=0.125;AN=56;BaseQRankSum=7.020;DP=687;FS=7.778;HRun=0;HaplotypeScore=149.5878;InbreedingCoeff=0.1460;MQ=53.06;MQ0=13;MQRankSum=-1.401;QD=5.20;ReadPosRankSum=-6.344;VQSLOD=-0.6688;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:84.92:0,85,1459	0/0:6,0:6:11.25:0,11,203	0/0:10,0:6:11.03:0,11,116	0/0:13,0:7:3.94:0,4,59	0/0:22,0:21:32.05:0,32,571	0/0:13,0:12:24.02:0,24,341	0/0:40,0:40:78.40:0,78,1062	0/1:35,0:33:99:121,0,271	0/0:29,0:29:54.31:0,54,1181	0/0:17,0:16:38.62:0,39,529	0/0:22,0:20:13.52:0,14,485	0/0:30,0:30:35.80:0,36,572	0/1:20,0:20:0.75:1,0,299	0/0:32,0:31:80.96:0,81,1174	0/0:21,0:21:51.06:0,51,837	0/0:27,0:27:42.91:0,43,742	0/0:24,0:24:40.12:0,40,729	0/0:25,0:25:28.25:0,28,614	0/1:22,0:19:82.18:166,0,82	1/1:13,0:13:14.93:114,15,0	0/1:64,2:65:99:476,0,274	0/0:25,0:25:65.86:0,66,907	0/0:16,0:15:10.01:0,10,291	0/0:41,0:41:50.99:0,51,769	0/0:16,0:16:33.01:0,33,416	0/0:21,0:21:6.71:0,7,311	0/1:19,3:22:99:175,0,151	0/0:5,0:5:6.02:0,6,96
chr10	101983454	.	CAT	C	691.91	PASS	AB=0.959;AC=8;AF=0.143;AN=56;BaseQRankSum=7.697;DP=681;FS=14.034;HRun=0;HaplotypeScore=128.7633;InbreedingCoeff=-0.1220;MQ=54.01;MQ0=13;MQRankSum=-0.600;QD=3.33;ReadPosRankSum=-4.412;VQSLOD=0.2386;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,4:53:29.63:0,30,840	0/0:6,0:6:12:0,12,172	0/0:12,0:8:16.92:0,17,153	0/0:12,0:7:3.47:0,3,58	0/0:21,0:20:31.94:0,32,452	0/0:12,0:11:15.14:0,15,216	0/0:41,0:41:66.48:0,66,904	0/1:34,0:32:99:118,0,284	0/0:29,0:29:43.09:0,43,817	0/0:17,0:16:38.62:0,39,501	0/0:22,0:20:31.19:0,31,386	0/0:30,0:30:21.56:0,22,387	0/1:20,0:20:15.77:16,0,229	0/0:32,0:31:62.62:0,63,883	0/0:21,0:21:41.34:0,41,634	0/0:27,0:27:35.73:0,36,571	0/0:25,0:25:33.40:0,33,665	0/0:26,0:26:39.33:0,39,390	0/1:14,8:19:99:118,0,112	0/1:13,0:13:5.81:55,0,6	0/1:64,0:63:75.91:324,0,76	0/0:25,0:25:49.19:0,49,687	0/1:14,1:14:30.68:31,0,246	0/0:42,0:42:52.98:0,53,616	0/0:15,0:15:24.18:0,24,337	0/1:19,0:19:3.89:4,0,132	0/1:21,0:21:46.93:157,0,47	0/0:5,0:5:6.01:0,6,65
chr10	101983461	.	A	ACACG	5185.68	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=3.757;DP=677;FS=9.612;HRun=0;HaplotypeScore=144.3411;InbreedingCoeff=0.9413;MQ=54.68;MQ0=9;MQRankSum=-0.327;QD=18.13;ReadPosRankSum=0.121;VQSLOD=3.8620;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:69.23:0,69,1109	1/1:3,4:7:6.02:148,6,0	0/0:12,0:9:26.96:0,27,351	0/0:12,0:7:9.40:0,9,131	1/1:8,15:24:14.98:312,15,0	0/0:12,0:11:21.06:0,21,302	0/0:36,0:36:60.17:0,60,937	1/1:33,0:31:38.98:543,39,0	0/0:27,0:27:48.15:0,48,763	0/0:17,0:16:24.05:0,24,343	0/0:24,0:22:45.10:0,45,662	1/1:11,21:35:18.06:414,18,0	1/1:5,11:18:14.82:284,15,0	0/0:31,0:31:60.09:0,60,896	0/0:21,0:21:42.12:0,42,667	1/1:11,15:26:18.06:434,18,0	0/0:23,0:23:42.14:0,42,668	0/0:28,0:28:41.12:0,41,559	1/1:26,0:24:29.65:435,30,0	1/1:17,0:17:15.02:248,15,0	1/1:58,0:57:88.33:1462,88,0	0/0:24,0:24:48.15:0,48,759	0/0:15,0:14:24.06:0,24,360	0/0:42,0:42:51.12:0,51,773	0/0:15,0:15:24.07:0,24,370	1/1:22,0:22:26.07:170,26,0	1/1:20,0:20:44.85:736,45,0	0/0:3,0:3:2.60:0,3,10
chr10	101986023	.	TACACACACAC	T	1701.86	PASS	AB=0.689;AC=9;AF=0.161;AN=56;BaseQRankSum=5.286;DP=649;FS=1.603;HRun=0;HaplotypeScore=179.7267;InbreedingCoeff=0.5274;MQ=59.21;MQ0=11;MQRankSum=-2.790;QD=17.19;ReadPosRankSum=-0.573;VQSLOD=2.4487;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:38:58.54:0,59,1543	0/1:7,3:10:31.04:252,0,31	0/0:49,0:29:3.01:0,3,40	0/0:45,0:15:5.93:0,6,40	0/0:13,4:17:14.29:0,14,105	0/0:24,0:24:24.08:0,24,845	0/0:22,0:23:33.10:0,33,1062	0/0:30,0:28:25.26:0,25,272	0/0:24,0:24:45.05:0,45,1524	0/0:24,0:24:37.63:0,38,1129	0/0:14,0:14:15.03:0,15,604	0/1:7,13:20:6.19:245,0,6	1/1:17,2:19:19.32:352,19,0	0/0:16,0:16:23.97:0,24,739	0/0:21,0:23:45.59:0,46,1725	1/1:5,8:13:9.03:267,9,0	0/0:24,0:25:42.12:0,42,1630	0/0:15,0:15:26.84:0,27,704	0/0:6,0:6:8.23:0,8,75	0/0:16,0:20:18.09:0,18,279	0/0:33,0:37:45.04:0,45,721	0/0:14,0:14:15.03:0,15,436	0/0:16,0:16:20.90:0,21,690	0/0:45,0:45:78.25:0,78,2821	0/0:19,0:21:51.61:0,52,1644	0/1:16,13:29:35.80:524,0,36	0/0:10,0:18:30.04:0,30,433	1/1:7,1:7:10.20:210,10,0
chr10	101987018	.	T	TTA	2190.37	PASS	AB=0.571;AC=13;AF=0.232;AN=56;BaseQRankSum=-2.336;DP=307;FS=23.932;HRun=0;HaplotypeScore=57.5280;InbreedingCoeff=0.8377;MQ=77.24;MQ0=0;MQRankSum=-0.447;QD=34.77;ReadPosRankSum=0.501;VQSLOD=2.8810;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:72.10:0,72,860	1/1:0,2:2:6.02:101,6,0	0/0:7,0:7:12.03:0,12,142	0/0:11,0:11:8.76:0,9,89	1/1:3,8:11:27.01:407,27,0	0/0:11,0:11:30.09:0,30,374	0/0:5,0:5:9.03:0,9,116	0/0:31,0:31:60.17:0,60,738	0/0:14,0:14:36.11:0,36,451	0/0:11,0:11:27.09:0,27,347	0/0:11,0:11:27.08:0,27,336	1/1:6,10:16:30.10:505,30,0	1/1:2,4:6:14.26:210,14,0	0/0:12,0:12:30.10:0,30,386	0/0:5,0:5:15.04:0,15,181	1/1:3,3:6:9.03:152,9,0	0/0:15,0:15:39.13:0,39,501	0/0:8,0:8:18.06:0,18,231	0/0:19,0:19:39.08:0,39,473	0/0:14,0:14:39.04:0,39,464	0/0:6,0:6:18.06:0,18,232	0/0:5,0:5:12.04:0,12,154	0/0:4,0:4:6.02:0,6,77	0/0:7,0:7:21.07:0,21,270	0/0:5,0:5:12.03:0,12,143	0/1:3,9:12:2.49:492,0,2	0/0:14,0:14:21.02:0,21,249	1/1:0,10:10:30.10:505,30,0
chr10	101987058	.	GAGATAGAT	G	4957.22	PASS	AB=0.625;AC=25;AF=0.446;AN=56;BaseQRankSum=7.821;DP=315;FS=0.000;HRun=0;HaplotypeScore=91.0993;InbreedingCoeff=0.7617;MQ=68.85;MQ0=2;MQRankSum=-6.840;QD=32.19;ReadPosRankSum=0.172;VQSLOD=4.3383;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:20:6.96:0,7,181	1/1:1,3:4:6.02:154,6,0	0/0:19,0:10:17.63:0,18,212	0/0:23,0:14:12.40:0,12,247	1/1:3,13:16:27.09:666,27,0	0/0:13,0:13:30.10:0,30,1145	0/0:5,0:5:15.04:0,15,449	1/1:11,10:21:30.04:399,30,0	0/0:12,0:12:30.10:0,30,1030	0/0:13,0:13:36.12:0,36,1342	0/0:6,0:6:12.04:0,12,419	1/1:5,4:9:6.02:154,6,0	1/1:5,0:5:6.02:149,6,0	0/0:11,0:11:21.07:0,21,860	0/0:7,0:7:21.07:0,21,800	1/1:1,4:5:12.04:300,12,0	0/0:16,0:16:15.29:0,15,522	1/1:3,9:12:9.03:231,9,0	1/1:9,10:19:30.07:702,30,0	1/1:4,16:20:30.10:769,30,0	1/1:6,0:6:2.98:21,3,0	0/0:6,0:6:18.06:0,18,698	0/0:4,0:4:9.03:0,9,375	0/0:4,0:4:3.01:0,3,125	0/0:2,0:2:3.01:0,3,125	0/1:4,6:10:99:431,0,104	1/1:2,11:13:21.07:538,21,0	1/1:4,10:13:18.06:444,18,0
chr10	101987354	.	TTA	T	2907.21	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.099;DP=379;FS=7.680;HRun=0;HaplotypeScore=52.0167;InbreedingCoeff=0.9653;MQ=77.96;MQ0=0;MQRankSum=-5.085;QD=35.45;ReadPosRankSum=-0.562;VQSLOD=5.1511;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.20:0,57,1045	0/0:8,0:8:24.08:0,24,440	0/0:13,0:13:33.11:0,33,573	0/0:14,0:14:39.13:0,39,673	0/0:16,0:16:48.16:0,48,856	0/0:11,0:11:33.11:0,33,605	0/0:3,0:3:9.03:0,9,165	1/1:2,29:31:87.28:1214,87,0	0/0:11,0:11:33.11:0,33,605	0/0:25,0:25:75.26:0,75,1351	0/0:13,0:13:36.12:0,36,660	0/0:14,0:14:39.13:0,39,699	0/0:21,0:21:63.22:0,63,1145	0/0:14,0:14:42.14:0,42,763	0/0:16,0:16:45.15:0,45,813	0/0:13,0:13:36.12:0,36,660	0/0:14,0:14:33.11:0,33,605	0/0:11,0:11:33.11:0,33,581	1/1:3,7:10:21.04:279,21,0	1/1:0,15:15:36.12:515,36,0	1/1:0,6:6:15.05:214,15,0	0/0:6,0:6:18.06:0,18,330	0/0:4,0:4:12.04:0,12,207	0/0:13,0:13:39.13:0,39,697	0/0:17,0:17:51.16:0,51,893	0/0:16,0:16:48.16:0,48,861	1/1:0,20:20:60.20:858,60,0	0/0:4,0:4:12.04:0,12,220
chr10	101988748	.	C	CTT	1155.32	PASS	AB=0.958;AC=18;AF=0.321;AN=56;BaseQRankSum=3.997;DP=348;FS=3.765;HRun=13;HaplotypeScore=57.4187;InbreedingCoeff=0.6589;MQ=61.55;MQ0=4;MQRankSum=-5.752;QD=8.82;ReadPosRankSum=-4.024;VQSLOD=0.3701;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:18:15.43:63,15,0	0/0:1,0:2:5.74:0,6,38	0/0:4,0:4:2.66:0,3,12	0/1:8,0:6:2.93:3,0,42	0/0:14,0:16:4.36:0,4,210	0/0:9,0:9:1.07:0,1,134	0/0:13,0:12:23.95:0,24,211	1/1:12,5:19:21.03:248,21,0	0/0:6,0:8:8.49:0,8,109	0/0:15,0:14:23.72:0,24,198	0/0:12,0:12:23.03:0,23,210	0/0:14,0:16:12.15:0,12,180	0/0:10,0:12:4.40:0,4,150	0/0:15,0:15:26.85:0,27,237	0/0:8,0:9:3.65:0,4,72	0/0:2,0:13:19.15:0,19,82	0/0:22,0:24:32.60:0,33,276	1/1:7,2:8:4.83:45,5,0	1/1:13,6:21:43.69:449,44,0	1/1:8,2:13:25.94:225,26,0	1/1:8,0:8:5.99:48,6,0	0/0:9,0:10:20.68:0,21,171	0/0:8,0:8:17.99:0,18,158	0/0:15,0:14:20.51:0,21,184	0/0:13,0:14:17.72:0,18,203	0/1:10,0:10:33.77:34,0,38	1/1:5,7:12:12.48:144,12,0	1/1:5,1:11:15.49:84,15,0
chr10	101991315	.	T	TAGG	13131.01	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-13.651;DP=527;FS=6.612;HRun=0;HaplotypeScore=70.5277;InbreedingCoeff=0.9761;MQ=76.89;MQ0=0;MQRankSum=-3.605;QD=52.73;ReadPosRankSum=1.278;VQSLOD=7.0016;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:45.15:992,45,0	1/1:0,8:8:24.08:530,24,0	0/0:34,0:34:90.21:0,90,1390	0/0:25,0:24:65.40:0,65,983	1/1:3,13:17:33.11:728,33,0	0/0:11,0:11:27.08:0,27,411	0/0:23,0:23:60.20:0,60,964	1/1:5,28:37:96.27:1914,96,0	0/0:19,0:19:48.16:0,48,770	0/0:18,0:18:51.17:0,51,799	0/0:12,0:12:36.08:0,36,550	1/1:0,22:22:63.22:1390,63,0	1/1:2,19:22:54.18:1190,54,0	0/0:26,0:26:78.27:0,78,1254	0/0:23,0:23:57.18:0,57,890	1/1:2,18:20:5.96:1077,6,0	0/0:23,0:23:69.24:0,69,1105	1/1:1,17:19:45.15:993,45,0	1/1:2,9:12:30.09:576,30,0	1/1:1,20:21:45.15:993,45,0	1/1:1,15:16:39.13:861,39,0	0/0:9,0:9:24.08:0,24,386	0/0:9,0:9:21.07:0,21,337	0/0:16,0:16:48.16:0,48,768	0/0:30,0:30:81.27:0,81,1277	1/1:3,8:11:27.09:577,27,0	1/1:2,18:21:51.18:1111,51,0	1/1:0,3:3:9.03:199,9,0
chr10	101992267	.	TA	T	335.01	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=4.787;DP=452;FS=3.912;HRun=6;HaplotypeScore=45.1327;InbreedingCoeff=0.5868;MQ=63.14;MQ0=0;MQRankSum=-0.218;QD=16.75;ReadPosRankSum=1.150;VQSLOD=3.0747;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:39.10:419,39,0	0/0:10,0:10:30.10:0,30,395	0/0:8,0:8:24.05:0,24,290	0/1:3,0:4:21.56:22,0,33	0/0:24,0:24:63.20:0,63,829	0/0:19,0:19:57.19:0,57,750	0/0:5,0:5:15.05:0,15,197	0/0:38,0:38:99:0,102,1317	0/0:13,0:13:36.12:0,36,474	0/0:21,0:21:54.13:0,54,668	0/0:23,0:23:66.19:0,66,841	0/0:14,1:15:9.87:0,10,466	0/0:17,0:17:48.16:0,48,630	0/0:10,0:10:24.06:0,24,288	0/0:14,0:14:42.11:0,42,523	0/0:15,0:15:45.13:0,45,577	0/0:17,0:17:45.15:0,45,591	0/0:9,0:9:24.08:0,24,316	0/0:28,0:28:84.26:0,84,1092	0/0:26,0:26:66.20:0,66,853	0/0:6,0:6:15.05:0,15,197	0/0:9,0:9:27.06:0,27,327	0/0:12,0:12:30.10:0,30,395	0/0:3,0:3:9.03:0,9,118	0/0:21,0:21:60.20:0,60,790	0/0:20,0:20:60.18:0,60,765	0/0:34,0:34:99:0,99,1302	0/0:15,0:15:45.10:0,45,573
chr10	101992582	.	G	GAA	3177.96	PASS	AB=0.762;AC=14;AF=0.250;AN=56;BaseQRankSum=-1.774;DP=610;FS=27.249;HRun=10;HaplotypeScore=74.7094;InbreedingCoeff=0.8467;MQ=72.34;MQ0=0;MQRankSum=-0.978;QD=19.62;ReadPosRankSum=0.554;VQSLOD=0.6468;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.12:0,69,695	1/1:1,10:11:27.09:403,27,0	0/0:13,0:13:20.98:0,21,199	0/1:10,0:10:6.85:7,0,161	1/1:6,19:29:64.51:777,65,0	0/0:30,0:33:92.41:0,92,890	0/0:9,0:9:18.01:0,18,183	0/0:28,0:29:80.90:0,81,795	0/0:17,0:18:53.86:0,54,530	0/0:38,0:39:95.88:0,96,1018	0/0:24,0:25:62.78:0,63,598	1/1:3,18:23:38.61:530,39,0	1/1:8,22:31:65.66:902,66,0	0/0:16,0:16:42.04:0,42,414	0/0:29,0:32:89.39:0,89,853	1/1:3,16:22:40.60:519,41,0	0/0:17,0:17:45.08:0,45,457	0/0:14,0:15:35.79:0,36,347	0/0:23,0:26:47.24:0,47,494	0/0:21,0:21:57.12:0,57,580	0/0:18,0:18:42.05:0,42,421	0/0:19,0:20:54.32:0,54,531	0/0:24,0:24:57.08:0,57,580	0/0:25,0:25:69.14:0,69,694	0/0:17,0:17:39.06:0,39,397	1/1:5,0:24:43.29:179,43,0	0/0:23,0:25:53.56:0,54,582	0/1:1,0:11:5.05:53,0,5
chr10	101993060	.	AT	A	7664.69	PASS	AB=0.560;AC=27;AF=0.482;AN=56;BaseQRankSum=15.542;DP=543;FS=1.066;HRun=8;HaplotypeScore=53.6538;InbreedingCoeff=0.9469;MQ=72.41;MQ0=0;MQRankSum=-1.117;QD=24.97;ReadPosRankSum=0.486;VQSLOD=5.4790;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:31:75.11:724,75,0	1/1:0,6:6:18.03:174,18,0	0/0:14,0:13:24.02:0,24,263	0/0:4,0:4:5.99:0,6,53	1/1:1,30:32:83.12:780,83,0	0/0:22,0:22:60.18:0,60,725	0/0:11,0:11:30.08:0,30,353	1/1:6,23:29:63.05:595,63,0	0/0:7,0:7:21.06:0,21,254	0/0:29,0:29:81.22:0,81,949	0/0:20,0:20:54.17:0,54,652	1/1:1,9:10:27.04:261,27,0	1/1:1,19:20:51.08:493,51,0	0/0:23,0:23:60.16:0,60,702	0/0:14,0:14:39.12:0,39,471	0/1:3,11:14:0.18:283,0,0	0/0:19,0:19:54.17:0,54,652	1/1:0,12:12:36.06:348,36,0	1/1:2,22:24:66.11:637,66,0	1/1:1,35:36:99:956,99,0	1/1:0,13:13:33.05:319,33,0	0/0:15,0:15:42.13:0,42,507	0/0:27,0:27:69.21:0,69,833	0/0:10,0:10:30.09:0,30,362	0/0:21,0:21:60.18:0,60,724	1/1:2,25:27:75.08:716,75,0	1/1:3,30:33:87.14:840,87,0	1/1:0,20:20:57.04:541,57,0
chr10	101993361	.	GT	G	2726.26	PASS	AB=0.932;AC=30;AF=0.536;AN=56;BaseQRankSum=12.635;DP=600;FS=1.560;HRun=14;HaplotypeScore=77.3494;InbreedingCoeff=0.8411;MQ=74.99;MQ0=0;MQRankSum=-1.969;QD=7.57;ReadPosRankSum=4.856;VQSLOD=2.9672;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,30:37:52.25:496,52,0	1/1:0,0:10:14.24:41,14,0	0/1:21,0:17:12.51:13,0,41	0/1:16,0:15:6.48:33,0,6	1/1:4,3:27:46.90:170,47,0	0/0:19,2:21:12.91:0,13,384	0/0:16,0:16:39.03:0,39,357	1/1:6,22:30:51.57:340,52,0	0/0:23,0:23:56.97:0,57,504	0/0:21,0:21:47.88:0,48,425	0/0:19,0:22:55.26:0,55,491	1/1:7,0:24:35.47:102,35,0	1/1:5,0:22:28.49:82,28,0	0/0:30,1:31:47.03:0,47,548	0/0:21,1:22:34.19:0,34,426	1/1:3,0:25:32.58:94,33,0	0/0:20,2:22:9.83:0,10,364	1/1:5,12:17:47.47:322,47,0	1/1:4,20:24:57.59:376,58,0	1/1:10,25:36:18.46:385,18,0	1/1:4,6:10:17.84:123,18,0	0/0:10,0:14:32.85:0,33,277	0/0:21,0:21:57.04:0,57,522	0/0:10,0:11:23.82:0,24,198	0/0:16,0:16:36.03:0,36,330	1/1:1,0:18:6.31:66,6,0	1/1:5,22:27:13.95:240,14,0	1/1:0,0:12:22.41:65,22,0
chr10	101993811	.	TCA	T	1379.56	PASS	AB=0.840;AC=24;AF=0.500;AN=48;BaseQRankSum=4.185;DP=716;FS=2.315;HRun=0;HaplotypeScore=102.9946;InbreedingCoeff=0.3155;MQ=69.03;MQ0=16;MQRankSum=-0.883;QD=3.21;ReadPosRankSum=1.591;VQSLOD=2.3544;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:50:0.62:1,0,60	1/1:5,0:7:2.84:14,3,0	./.	./.	./.	0/1:16,0:14:14.54:15,0,135	0/0:27,0:27:11.15:0,11,292	0/0:17,0:16:5.86:0,6,35	1/1:11,9:23:11.52:74,12,0	0/1:29,3:32:27.59:28,0,299	0/0:17,0:17:15:0,15,158	0/1:12,0:29:1.90:64,0,2	0/1:18,0:27:11.42:31,0,11	1/1:15,7:23:14.46:121,14,0	1/1:20,16:37:23.72:222,24,0	0/1:15,0:31:0.58:116,0,1	1/1:17,18:35:26.74:285,27,0	0/0:23,0:23:19.62:0,20,219	0/0:19,0:19:3.95:0,4,33	0/0:26,0:31:11:0,11,154	0/0:23,0:42:2.70:0,3,42	0/1:21,0:21:24.72:25,0,54	1/1:18,2:22:27.56:214,28,0	1/1:19,14:32:20.95:210,21,0	1/1:10,8:19:11.86:111,12,0	0/1:15,0:19:16.27:16,0,31	0/0:9,0:11:8.88:0,9,79	./.
chr10	101994216	.	G	GAA	3776.77	PASS	AB=0.541;AC=13;AF=0.232;AN=56;BaseQRankSum=14.801;DP=524;FS=5.928;HRun=1;HaplotypeScore=101.0220;InbreedingCoeff=0.9291;MQ=87.42;MQ0=0;MQRankSum=-14.819;QD=34.02;ReadPosRankSum=0.726;VQSLOD=3.7781;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.23:0,72,1077	1/1:2,7:9:27:337,27,0	0/0:23,0:23:65.80:0,66,930	0/0:19,0:19:50.57:0,51,670	1/1:4,11:14:22.25:319,22,0	0/0:30,0:30:63.28:0,63,1241	0/0:17,0:17:48.16:0,48,735	0/0:31,0:31:90.29:0,90,1339	0/0:29,0:29:78.21:0,78,1105	0/0:21,0:21:54.18:0,54,810	0/0:20,0:20:60.20:0,60,916	1/1:8,14:22:54.44:742,54,0	1/1:5,14:19:53.62:749,54,0	0/0:20,0:20:60.19:0,60,895	0/0:15,0:15:45.15:0,45,687	1/1:10,11:21:17.23:762,17,0	0/0:13,0:13:39.12:0,39,575	0/0:12,0:12:36.07:0,36,524	0/0:15,0:15:45.14:0,45,669	0/0:20,0:20:54.18:0,54,824	0/0:17,0:17:51.16:0,51,758	0/0:14,0:14:42.13:0,42,621	0/0:21,0:21:63.20:0,63,941	0/0:11,0:11:30.06:0,30,433	0/0:14,0:14:36.12:0,36,551	0/1:3,17:20:2.88:672,0,3	0/0:26,0:26:78.26:0,78,1194	1/1:1,4:5:15.04:197,15,0
chr10	101994218	.	T	TCTA	4833.51	PASS	AB=0.571;AC=13;AF=0.232;AN=56;BaseQRankSum=13.738;DP=504;FS=12.473;HRun=0;HaplotypeScore=97.2735;InbreedingCoeff=0.8782;MQ=89.22;MQ0=0;MQRankSum=-13.298;QD=49.32;ReadPosRankSum=1.995;VQSLOD=6.3841;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.26:0,75,1378	1/1:0,7:7:21.07:408,21,0	0/0:23,0:23:48.04:0,48,1130	0/0:19,0:19:51.07:0,51,845	1/1:4,11:14:24.08:441,24,0	0/0:29,0:29:86.88:0,87,1575	0/0:16,0:16:48.16:0,48,895	0/0:29,0:29:87.28:0,87,1566	0/0:27,0:27:81.22:0,81,1442	0/0:20,0:20:60.20:0,60,1082	0/0:20,0:20:60.19:0,60,1087	1/1:5,14:19:51.17:957,51,0	1/1:2,14:16:48.16:912,48,0	0/0:20,0:20:60.21:0,60,1117	0/0:16,0:16:45.15:0,45,825	0/1:4,11:16:7.78:840,0,8	0/0:14,0:14:39.13:0,39,727	0/0:12,0:12:36.12:0,36,671	0/0:15,0:15:45.15:0,45,839	0/0:18,0:18:54.17:0,54,965	0/0:17,0:17:51.16:0,51,919	0/0:15,0:15:42.14:0,42,783	0/0:20,0:20:60.21:0,60,1118	0/0:9,0:9:27.09:0,27,493	0/0:15,0:15:39.12:0,39,695	1/1:4,17:21:4.25:1041,4,0	0/0:27,0:27:81.26:0,81,1478	1/1:0,4:4:12.04:235,12,0
chr10	101994524	.	ATAT	A	5796.03	PASS	AB=0.533;AC=13;AF=0.232;AN=56;BaseQRankSum=11.284;DP=594;FS=1.207;HRun=0;HaplotypeScore=104.8784;InbreedingCoeff=0.8879;MQ=84.48;MQ0=0;MQRankSum=-3.085;QD=37.39;ReadPosRankSum=3.314;VQSLOD=5.7310;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.23:0,66,1475	1/1:0,6:6:9.03:150,9,0	0/0:20,0:20:54.19:0,54,1175	0/0:17,0:17:44.47:0,44,858	1/1:2,30:32:66.15:1039,66,0	0/0:22,0:22:60.21:0,60,1341	0/0:16,0:16:48.15:0,48,1001	0/0:32,0:32:93.31:0,93,1984	0/0:15,0:15:39.13:0,39,856	0/0:32,0:32:90.31:0,90,2028	0/0:20,0:20:60.21:0,60,1334	1/1:3,15:18:39.13:649,39,0	1/1:1,20:21:48.13:770,48,0	0/0:21,0:21:63.20:0,63,1357	0/0:28,0:28:81.28:0,81,1783	1/1:3,23:26:63.21:1038,63,0	0/0:18,0:18:48.15:0,48,1018	0/0:16,0:16:45.12:0,45,972	0/0:19,0:19:54.19:0,54,1219	0/0:31,0:31:84.27:0,84,1860	0/0:16,0:16:48.15:0,48,1017	0/0:18,0:18:54.19:0,54,1224	0/0:18,0:18:54.19:0,54,1224	0/0:15,0:15:45.11:0,45,969	0/0:19,0:19:57.20:0,57,1258	0/1:5,35:40:89.67:1601,0,90	0/0:21,0:21:60.21:0,60,1346	1/1:0,12:12:33.11:549,33,0
chr10	101995796	.	G	GTCTC	21200.92	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-10.123;DP=925;FS=2.766;HRun=0;HaplotypeScore=180.2796;InbreedingCoeff=0.9089;MQ=73.19;MQ0=9;MQRankSum=-4.824;QD=39.63;ReadPosRankSum=2.586;VQSLOD=5.3274;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,36:45:74.21:1930,74,0	1/1:4,3:7:15.02:288,15,0	0/0:78,0:42:63.85:0,64,1164	0/1:105,0:72:10.82:11,0,1272	1/1:12,21:34:56.96:1273,57,0	0/0:25,0:25:69.20:0,69,1195	0/0:32,0:32:93.13:0,93,1542	1/1:2,32:35:93.20:2044,93,0	0/0:29,0:29:81.19:0,81,1323	0/0:25,0:25:71.27:0,71,1275	0/0:16,0:16:42.13:0,42,733	1/1:10,18:28:59.90:1333,60,0	1/1:8,19:27:60.07:1493,60,0	0/0:26,0:26:72.19:0,72,1223	0/0:25,0:25:69.22:0,69,1238	1/1:15,30:45:99:2439,105,0	0/0:21,0:21:57.06:0,57,904	1/1:3,10:16:24.08:590,24,0	1/1:3,28:31:84.18:1898,84,0	1/1:5,33:42:54.08:1361,54,0	1/1:5,37:43:86.78:2226,87,0	0/0:25,0:25:63.18:0,63,1079	0/0:31,0:31:93.23:0,93,1543	0/0:30,0:30:75.09:0,75,1248	0/0:27,0:27:69.22:0,69,1221	1/1:10,27:36:93.27:2200,93,0	1/1:3,25:29:63.10:1660,63,0	1/1:2,6:8:3.34:457,3,0
chr10	101995842	.	CTG	C	4655.26	PASS	AB=0.920;AC=15;AF=0.268;AN=56;BaseQRankSum=12.292;DP=866;FS=8.949;HRun=0;HaplotypeScore=159.1643;InbreedingCoeff=0.8654;MQ=69.65;MQ0=4;MQRankSum=-6.415;QD=21.26;ReadPosRankSum=4.327;VQSLOD=4.9188;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,1:42:81.22:0,81,1256	1/1:1,8:9:18.06:229,18,0	0/0:47,0:38:73.62:0,74,1070	0/0:80,1:61:55.47:0,55,1118	1/1:5,25:30:32.85:419,33,0	0/0:26,1:27:25.01:0,25,930	0/0:21,2:23:18.96:0,19,784	0/0:32,0:32:81.22:0,81,1247	0/0:23,0:23:60.18:0,60,970	0/0:33,1:34:57.97:0,58,1362	0/0:24,0:24:63.21:0,63,1030	1/1:6,28:35:59.92:731,60,0	1/1:2,20:22:48.11:591,48,0	0/0:26,2:28:5.04:0,5,1172	0/0:26,1:27:31.01:0,31,1034	1/1:8,36:44:96.16:1180,96,0	0/0:21,0:21:60.19:0,60,974	0/0:19,0:19:36.05:0,36,537	0/0:23,0:23:57:0,57,818	0/0:39,0:39:89.11:0,89,1365	0/0:37,3:40:13.97:0,14,1295	0/0:27,0:27:72.25:0,72,1204	0/0:34,1:35:52.14:0,52,1376	0/0:30,1:31:40.10:0,40,1184	0/1:21,2:23:16.16:16,0,786	1/1:10,39:48:67.15:1374,67,0	0/0:20,1:21:9.77:0,10,708	1/1:4,3:7:9.03:114,9,0
chr10	101996078	.	GA	G	4248.38	PASS	AB=0.774;AC=29;AF=0.518;AN=56;BaseQRankSum=13.802;DP=727;FS=13.853;HRun=11;HaplotypeScore=89.2209;InbreedingCoeff=0.7715;MQ=69.38;MQ0=2;MQRankSum=-0.491;QD=10.65;ReadPosRankSum=4.823;VQSLOD=2.5710;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,34:42:57.88:682,58,0	1/1:2,0:5:6.10:18,6,0	0/1:14,3:17:62.67:63,0,181	0/0:12,0:12:17.03:0,17,187	1/1:5,0:38:54.22:165,54,0	0/0:19,0:24:49.21:0,49,528	0/0:25,0:26:68.97:0,69,701	1/1:11,21:32:55.13:458,55,0	0/0:20,0:20:46.34:0,46,471	0/0:23,0:25:56.94:0,57,566	0/0:24,0:24:57.13:0,57,601	1/1:2,0:17:26.48:77,26,0	1/1:2,0:21:32.59:94,33,0	0/0:31,0:31:64.69:0,65,661	0/0:25,1:26:41.88:0,42,623	1/1:3,0:23:34.62:100,35,0	0/0:32,0:32:70.87:0,71,810	1/1:3,16:19:38.95:320,39,0	0/1:9,15:24:14.98:293,0,15	1/1:6,28:34:74.46:600,74,0	1/1:4,35:39:86.90:714,87,0	0/0:33,1:35:26.33:0,26,621	0/0:46,1:47:87.08:0,87,1112	0/1:15,3:18:7.74:8,0,369	0/0:25,0:25:63.14:0,63,658	1/1:3,1:23:8.07:91,8,0	1/1:4,25:31:50.54:514,51,0	1/1:3,0:13:17.29:51,17,0
chr10	101996948	.	CTG	C	425.13	PASS	AB=0.982;AC=14;AF=0.269;AN=52;BaseQRankSum=6.181;DP=610;FS=6.702;HRun=0;HaplotypeScore=113.8720;InbreedingCoeff=0.0412;MQ=53.84;MQ0=16;MQRankSum=0.409;QD=1.79;ReadPosRankSum=-2.726;VQSLOD=0.6778;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:30:1.26:103,0,1	0/1:9,0:9:5.65:45,0,6	./.	./.	1/1:24,0:23:8.41:68,8,0	0/0:23,0:23:44:0,44,525	0/0:24,0:24:38.57:0,39,479	0/0:30,0:29:18.93:0,19,250	0/0:14,0:14:11.65:0,12,359	0/0:31,0:32:55.59:0,56,734	0/0:21,0:21:39.07:0,39,522	0/1:16,0:16:28.10:39,0,28	0/1:25,0:25:16.04:139,0,16	0/1:19,0:19:35.58:36,0,404	0/1:15,0:15:1.91:2,0,209	1/1:13,0:12:2.90:44,3,0	0/1:31,1:32:10.50:11,0,744	0/1:16,0:15:45.88:67,0,46	0/0:20,0:18:2.83:0,3,167	0/0:26,0:26:29.51:0,30,259	0/0:22,0:22:7.90:0,8,168	0/0:21,0:21:39.01:0,39,452	0/1:15,1:16:9.93:10,0,307	0/0:39,0:39:48.37:0,48,1134	0/1:18,2:20:6.38:6,0,391	0/0:25,0:24:28.76:0,29,447	0/0:20,0:20:20.68:0,21,325	0/0:8,0:8:2.46:0,2,194
chr10	101997632	.	G	GT	4530.43	PASS	AB=0.531;AC=15;AF=0.268;AN=56;BaseQRankSum=-11.598;DP=612;FS=5.501;HRun=9;HaplotypeScore=56.2437;InbreedingCoeff=0.9059;MQ=74.58;MQ0=0;MQRankSum=-1.233;QD=27.79;ReadPosRankSum=1.771;VQSLOD=5.1133;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:57.15:630,57,0	1/1:2,8:10:1.02:239,1,0	0/0:14,0:14:31.24:0,31,246	0/0:9,0:10:14.73:0,15,116	1/1:4,31:36:73:995,73,0	0/0:14,0:14:38.99:0,39,339	0/0:15,0:15:44.97:0,45,387	0/0:38,0:38:89.92:0,90,776	0/0:19,0:19:41.97:0,42,365	0/0:35,0:35:89.97:0,90,778	0/0:32,0:32:60.74:0,61,699	1/1:1,21:22:60.16:664,60,0	1/1:3,19:22:35.34:593,35,0	0/0:24,0:24:65.97:0,66,569	0/0:26,0:26:66.43:0,66,569	1/1:1,20:21:57.15:631,57,0	0/0:22,0:22:62.99:0,63,547	0/0:11,0:11:29.98:0,30,260	0/0:23,0:23:56.95:0,57,491	0/0:25,0:25:65.98:0,66,573	0/0:17,0:17:47.99:0,48,417	0/0:34,0:35:88.96:0,89,754	0/0:30,0:31:86:0,86,731	0/0:13,0:13:29.95:0,30,253	0/0:24,0:24:50.97:0,51,443	0/1:2,15:17:0.98:447,0,1	0/0:21,0:21:53.98:0,54,469	1/1:1,10:11:30.08:332,30,0
chr10	101998837	.	CATAG	C	4105.90	PASS	AB=0.923;AC=35;AF=0.761;AN=46;BaseQRankSum=8.966;DP=694;FS=1.340;HRun=0;HaplotypeScore=129.2768;InbreedingCoeff=0.7836;MQ=72.84;MQ0=3;MQRankSum=-1.929;QD=9.25;ReadPosRankSum=1.077;VQSLOD=2.8185;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:27:9:80,9,0	1/1:6,0:9:6.01:56,6,0	./.	./.	1/1:20,0:30:16.26:143,16,0	1/1:15,12:28:30.09:434,30,0	1/1:22,5:27:12.04:181,12,0	./.	1/1:16,11:27:24.08:361,24,0	1/1:18,15:34:45.12:634,45,0	0/1:22,2:24:63.25:63,0,454	1/1:9,0:16:15.02:139,15,0	1/1:12,0:18:15.02:140,15,0	1/1:22,16:38:32.95:497,33,0	0/0:31,0:31:30.10:0,30,673	1/1:14,1:19:12.02:129,12,0	1/1:19,8:27:21.07:316,21,0	./.	1/1:14,0:19:15.02:140,15,0	1/1:29,0:35:12.01:112,12,0	./.	0/0:23,0:23:15.03:0,15,301	0/0:38,0:38:42.14:0,42,969	0/0:13,0:13:15.05:0,15,346	0/0:22,0:23:24.08:0,24,537	1/1:17,11:26:33.10:476,33,0	1/1:19,0:26:20.37:161,20,0	1/1:12,0:12:5.96:44,6,0
chr10	101999772	.	ATGAAGCACCATTC	A	9270.63	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.519;DP=708;FS=15.210;HRun=0;HaplotypeScore=260.2163;InbreedingCoeff=0.9589;MQ=89.57;MQ0=0;MQRankSum=-12.889;QD=86.64;ReadPosRankSum=1.755;VQSLOD=3.4209;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,6631	0/0:21,0:21:63.19:0,63,3537	0/0:27,0:27:78.27:0,78,4252	0/0:30,0:30:80.58:0,81,4253	0/0:35,0:35:99:0,105,6613	0/0:26,0:26:69.24:0,69,4448	0/0:30,0:30:87.30:0,87,5221	1/1:6,17:23:51.16:1890,51,0	0/0:30,0:30:87.30:0,87,5560	0/0:31,0:31:87.30:0,87,5228	0/0:26,0:26:75.26:0,75,4565	0/0:35,0:35:99:0,105,6455	0/0:25,0:25:72.25:0,72,4625	0/0:21,0:21:60.21:0,60,4010	0/0:46,0:46:99:0,135,8594	0/0:32,0:32:96.33:0,96,6093	0/0:32,0:32:96.33:0,96,5957	0/0:17,0:17:51.18:0,51,3132	1/1:0,4:4:9.03:368,9,0	1/1:3,13:16:36.12:1435,36,0	1/1:3,7:10:9.03:330,9,0	0/0:25,0:25:75.26:0,75,4779	0/0:23,0:23:69.24:0,69,4404	0/0:26,0:26:78.27:0,78,4806	0/0:26,0:26:75.26:0,75,4975	1/1:3,22:25:66.23:2668,66,0	1/1:6,21:27:57.20:2333,57,0	1/1:0,2:2:6.02:246,6,0
chr10	102001238	.	A	AT	13533.16	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-16.295;DP=658;FS=8.117;HRun=2;HaplotypeScore=57.7342;InbreedingCoeff=0.9563;MQ=73.61;MQ0=1;MQRankSum=-0.871;QD=34.44;ReadPosRankSum=1.804;VQSLOD=4.8616;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,49:51:99:1596,111,0	1/1:2,16:18:42.14:604,42,0	0/1:12,0:9:0.79:1,0,93	0/0:18,0:15:30.78:0,31,261	1/1:4,29:33:87.25:1227,87,0	0/0:17,0:17:42.12:0,42,509	0/0:16,0:16:48.12:0,48,567	1/1:0,43:43:99:1729,129,0	0/0:26,0:26:75.21:0,75,904	0/0:30,0:30:90.26:0,90,1094	0/0:24,0:24:66.19:0,66,795	1/1:1,21:22:23.03:783,23,0	1/1:2,19:21:36.12:514,36,0	0/0:14,0:14:39.11:0,39,473	0/0:21,0:21:60.18:0,60,732	1/1:0,19:19:54.18:777,54,0	0/0:20,0:20:54.13:0,54,641	1/1:1,29:30:72.24:1036,72,0	1/1:1,19:20:57.13:746,57,0	1/1:0,33:33:87.20:1203,87,0	1/1:1,15:16:36.12:517,36,0	0/0:17,0:17:48.14:0,48,584	0/0:17,0:17:51.11:0,51,576	0/0:23,0:23:69.20:0,69,841	0/0:22,0:22:63.17:0,63,747	1/1:3,34:37:34:1376,34,0	1/1:1,31:30:87.15:1251,87,0	1/1:0,6:6:12.04:173,12,0
chr10	102001789	.	C	CA	2905.69	PASS	AB=0.875;AC=15;AF=0.268;AN=56;BaseQRankSum=-9.142;DP=527;FS=1.809;HRun=10;HaplotypeScore=58.9949;InbreedingCoeff=0.8376;MQ=76.07;MQ0=1;MQRankSum=0.451;QD=21.06;ReadPosRankSum=0.151;VQSLOD=4.5403;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:20:25.89:484,26,0	1/1:1,5:7:17.84:162,18,0	0/0:13,0:13:16.91:0,17,117	0/0:15,0:15:11.22:0,11,126	1/1:6,21:27:13.87:559,14,0	0/0:17,0:18:43.97:0,44,351	0/0:19,0:19:50.91:0,51,415	0/0:38,0:38:86.86:0,87,712	0/0:18,0:19:52.96:0,53,425	0/0:18,0:18:38.92:0,39,320	0/0:11,1:13:6.01:0,6,245	1/1:0,16:16:48.12:512,48,0	1/1:1,13:15:32.95:334,33,0	0/0:10,0:10:20.96:0,21,172	0/0:13,0:13:29.95:0,30,246	1/1:3,16:19:45.11:479,45,0	0/0:28,1:29:48.91:0,49,608	1/1:2,18:20:51.13:544,51,0	0/1:12,2:14:28.08:28,0,202	0/0:20,1:22:20.98:0,21,368	0/0:11,1:12:3.96:0,4,235	0/0:21,0:21:55.84:0,56,440	0/0:13,0:13:26.93:0,27,222	0/0:19,0:20:49.92:0,50,396	0/0:29,0:30:76.90:0,77,619	0/0:21,1:22:27.90:0,28,431	0/0:35,0:35:60.54:0,61,641	0/0:6,0:7:6.55:0,7,127
chr10	102003759	.	TA	T	7404.94	PASS	AB=0.929;AC=29;AF=0.518;AN=56;BaseQRankSum=9.598;DP=663;FS=1.768;HRun=10;HaplotypeScore=71.7461;InbreedingCoeff=0.9126;MQ=73.73;MQ0=0;MQRankSum=-1.902;QD=19.91;ReadPosRankSum=2.422;VQSLOD=5.9092;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,45:54:99:1066,122,0	1/1:1,11:12:32.99:287,33,0	0/0:21,0:21:19.96:0,20,321	0/1:12,1:12:13.76:14,0,153	1/1:4,17:21:47.98:417,48,0	0/0:26,0:27:74.98:0,75,786	0/0:16,0:16:36.08:0,36,390	1/1:4,27:31:80.94:695,81,0	0/0:24,2:26:37.11:0,37,630	0/0:25,2:27:14.39:0,14,605	0/0:30,1:31:46.17:0,46,693	1/1:2,23:25:50.85:443,51,0	1/1:2,25:27:68.89:599,69,0	0/0:30,1:31:43.11:0,43,694	0/0:27,0:27:69.18:0,69,755	1/1:1,23:24:62.97:547,63,0	0/0:14,0:14:33.08:0,33,358	1/1:0,14:14:38.90:329,39,0	1/1:5,24:29:68.95:595,69,0	1/1:4,9:13:23.98:208,24,0	1/1:5,30:35:71.98:625,72,0	0/0:10,0:11:32.92:0,33,346	0/0:14,1:15:10.94:0,11,332	0/0:18,2:20:8.11:0,8,541	0/0:23,2:25:43.11:0,43,688	1/1:6,28:34:53.81:696,54,0	1/1:3,26:29:74.97:651,75,0	1/1:0,11:11:26.99:234,27,0
chr10	102004975	.	TA	T	4061.06	PASS	AB=0.857;AC=15;AF=0.268;AN=56;BaseQRankSum=13.565;DP=632;FS=0.336;HRun=10;HaplotypeScore=61.1456;InbreedingCoeff=0.8764;MQ=67.40;MQ0=0;MQRankSum=-1.524;QD=20.31;ReadPosRankSum=3.667;VQSLOD=4.4333;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,40:44:97.33:993,97,0	1/1:0,5:5:15:130,15,0	0/0:12,1:12:3.78:0,4,236	0/1:10,2:11:21.32:21,0,192	1/1:6,26:32:77.95:671,78,0	0/0:26,0:26:62.05:0,62,720	0/0:25,1:26:49.15:0,49,770	0/0:36,0:36:78.19:0,78,848	0/0:16,0:16:36.10:0,36,398	0/0:27,1:29:48.19:0,48,782	0/0:29,0:29:57.15:0,57,623	1/1:3,17:20:47.02:397,47,0	1/1:2,30:32:77.98:677,78,0	0/0:16,1:17:16.11:0,16,405	0/0:21,0:21:54.15:0,54,597	1/1:5,30:35:83.98:729,84,0	0/0:22,0:22:60.12:0,60,650	1/1:2,18:20:50.99:443,51,0	0/0:27,0:27:69.07:0,69,739	0/0:26,0:26:72.19:0,72,792	0/0:19,0:19:45.11:0,45,490	0/0:13,0:13:27.52:0,28,284	0/0:18,0:18:42.07:0,42,451	0/0:21,0:21:57.14:0,57,622	0/0:21,0:21:57.15:0,57,624	0/0:25,0:25:69.18:0,69,759	0/0:22,0:22:63.14:0,63,680	0/0:5,0:5:15.02:0,15,156
chr10	102008769	.	A	AACACAC	5060.42	PASS	AB=0.758;AC=16;AF=0.286;AN=56;BaseQRankSum=-2.128;DP=955;FS=4.461;HRun=0;HaplotypeScore=213.1611;InbreedingCoeff=0.7680;MQ=61.80;MQ0=27;MQRankSum=-9.229;QD=19.31;ReadPosRankSum=-5.960;VQSLOD=2.8555;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:21,9:33:18.53:471,19,0	1/1:5,8:16:27.09:738,27,0	0/0:78,0:20:8.81:0,9,64	0/0:76,0:31:9.70:0,10,288	1/1:12,12:29:15.05:273,15,0	0/0:20,0:20:48.12:0,48,891	0/0:37,0:43:85.75:0,86,1644	0/1:31,0:39:80.39:80,0,167	0/0:37,0:40:73.12:0,73,1415	0/0:35,0:37:72.23:0,72,1394	0/0:24,0:25:47.86:0,48,924	1/1:19,11:41:51.17:1265,51,0	1/1:14,10:27:30.49:891,30,0	0/0:28,0:31:58.98:0,59,1060	0/0:46,0:52:89.37:0,89,2039	1/1:8,17:33:44.41:1295,44,0	0/0:23,0:28:66.18:0,66,1196	0/0:5,0:12:4.79:0,5,10	1/1:11,0:16:0.13:17,0,0	0/1:13,0:24:2.48:30,0,2	0/0:26,0:77:19.31:0,19,478	0/0:26,0:28:57.19:0,57,1139	0/0:33,0:34:66.21:0,66,1307	0/0:28,0:28:60.16:0,60,1140	0/0:17,0:21:46.04:0,46,864	0/0:29,0:32:60.13:0,60,1170	0/0:10,0:21:12.60:0,13,80	0/0:8,0:8:18.06:0,18,361
chr10	102009172	.	A	AC	6269.55	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-1.961;DP=643;FS=5.858;HRun=4;HaplotypeScore=73.1482;InbreedingCoeff=0.9992;MQ=85.04;MQ0=0;MQRankSum=-2.121;QD=36.24;ReadPosRankSum=3.386;VQSLOD=5.2011;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,43:45:99:1682,123,0	1/1:0,9:9:24.08:328,24,0	0/0:21,0:21:57.15:0,57,633	0/0:19,0:19:45.12:0,45,505	1/1:1,22:23:54.18:731,54,0	0/0:23,0:23:63.16:0,63,705	0/0:20,0:20:51.14:0,51,579	0/0:27,0:27:65.71:0,66,741	0/0:20,0:20:60.17:0,60,676	0/0:30,0:30:87.24:0,87,981	0/0:18,0:18:54.15:0,54,612	1/1:1,25:26:75.25:1026,75,0	1/1:0,22:22:60.20:820,60,0	0/0:27,0:27:78.22:0,78,884	0/0:24,0:24:72.19:0,72,806	1/1:2,26:28:72.24:985,72,0	0/0:24,0:24:69.20:0,69,783	1/1:0,20:20:51.17:697,51,0	0/0:16,0:16:45.13:0,45,510	0/0:21,0:21:57.16:0,57,647	0/0:37,0:37:99:0,105,1183	0/0:16,0:16:42.12:0,42,476	0/0:27,0:27:78.22:0,78,884	0/0:25,0:25:69.20:0,69,782	0/0:22,0:22:66.17:0,66,737	0/0:20,0:20:53.72:0,54,570	0/0:24,0:24:69.20:0,69,783	0/0:9,0:9:24.07:0,24,272
chr10	102009427	.	T	TCTCA	1689.37	PASS	AB=0.839;AC=21;AF=0.375;AN=56;BaseQRankSum=9.945;DP=675;FS=2.786;HRun=0;HaplotypeScore=127.1630;InbreedingCoeff=0.3757;MQ=62.08;MQ0=13;MQRankSum=-5.659;QD=5.89;ReadPosRankSum=-1.381;VQSLOD=2.6594;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,24:35:6.02:73,6,0	1/1:0,12:15:2.92:82,3,0	0/0:38,0:12:30.71:0,31,260	0/0:41,0:15:24.05:0,24,208	1/1:6,18:24:3.01:37,3,0	0/0:21,0:21:53.89:0,54,626	0/0:22,0:24:69.03:0,69,964	0/1:20,0:20:12.75:13,0,342	0/0:28,0:29:84.05:0,84,1041	0/0:23,0:23:69.10:0,69,884	0/0:17,0:19:50.98:0,51,555	1/1:6,17:27:14.96:368,15,0	1/1:1,14:17:15.05:404,15,0	0/0:30,0:30:79.01:0,79,1118	0/0:40,0:42:99:0,117,1663	1/1:3,17:22:5.76:156,6,0	0/0:27,0:34:77.85:0,78,1158	1/1:18,0:17:45.12:364,45,0	0/1:10,0:8:67:67,0,111	0/1:11,0:19:8.79:9,0,145	0/1:31,0:26:64.19:64,0,226	0/0:12,0:14:35.98:0,36,406	0/0:20,0:21:50.35:0,50,779	0/0:29,0:32:87:0,87,1213	0/0:19,0:19:54.03:0,54,648	0/1:11,0:16:99:135,0,129	0/1:10,0:18:19.53:20,0,171	0/1:9,0:14:84.61:85,0,112
chr10	102010148	.	C	CT	1313.06	PASS	AB=0.947;AC=12;AF=0.214;AN=56;BaseQRankSum=-1.428;DP=429;FS=0.567;HRun=2;HaplotypeScore=59.4546;InbreedingCoeff=0.7305;MQ=86.22;MQ0=0;MQRankSum=0.574;QD=11.42;ReadPosRankSum=0.572;VQSLOD=1.8107;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:24.08:343,24,0	1/1:3,0:3:2.98:21,3,0	0/0:23,0:22:27.55:0,28,312	0/0:20,0:17:29.52:0,30,291	1/1:23,1:24:53.37:463,53,0	0/0:16,0:16:44.57:0,45,386	0/0:21,0:21:57.01:0,57,581	0/0:19,0:19:47.81:0,48,379	0/0:13,0:13:36.05:0,36,381	0/0:10,0:10:20.69:0,21,174	0/1:16,0:16:2.88:3,0,133	1/1:3,6:10:8.99:90,9,0	0/0:2,8:10:0:0,0,0	0/0:13,0:13:33.03:0,33,331	0/0:18,0:18:51.06:0,51,531	0/1:15,2:16:8.07:130,0,8	0/0:21,0:21:57.01:0,57,600	1/1:4,16:20:30.52:428,31,0	0/0:16,0:16:43.62:0,44,330	0/0:25,0:25:52.95:0,53,446	0/0:15,0:15:29.89:0,30,235	0/0:11,0:11:18.02:0,18,194	0/0:11,0:11:23.30:0,23,205	0/0:7,0:7:20.97:0,21,212	0/0:11,0:11:16.90:0,17,161	0/0:11,0:11:11.87:0,12,86	0/0:21,0:21:56.71:0,57,439	0/0:2,0:2:5.91:0,6,38
chr10	102010150	.	TC	T	976.96	PASS	AB=0.910;AC=15;AF=0.268;AN=56;BaseQRankSum=0.245;DP=425;FS=2.753;HRun=11;HaplotypeScore=59.0653;InbreedingCoeff=0.4133;MQ=85.42;MQ0=0;MQRankSum=-0.414;QD=5.52;ReadPosRankSum=2.548;VQSLOD=1.3750;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:26.40:0,26,169	0/0:0,0:3:2.94:0,3,18	0/1:23,0:23:19.98:20,0,125	0/0:18,0:15:16.32:0,16,131	0/0:1,0:24:34.63:0,35,202	0/1:14,2:16:22.12:22,0,181	0/1:17,4:21:44.53:45,0,321	1/1:9,9:18:14.90:123,15,0	0/0:12,1:13:2.42:0,2,224	0/1:8,1:9:12.55:13,0,84	0/0:14,0:14:13.89:0,14,135	0/0:10,0:12:11.76:0,12,84	0/0:11,0:12:4.24:0,4,28	0/1:11,1:12:3.60:4,0,164	0/0:18,0:18:36.01:0,36,357	0/0:4,0:16:14.37:0,14,77	0/0:20,1:21:17.45:0,17,383	0/0:19,0:19:35.28:0,35,236	1/1:7,9:16:26.88:213,27,0	1/1:9,16:25:29.83:246,30,0	1/1:7,8:15:11.96:98,12,0	0/0:10,0:10:15.04:0,15,160	0/0:9,1:10:2.67:0,3,115	0/0:7,0:7:12.03:0,12,128	0/0:11,0:11:14.72:0,15,131	0/0:9,0:12:2.96:0,3,22	1/1:4,17:21:44.93:369,45,0	0/0:2,0:2:5.95:0,6,41
chr10	102010609	.	AATG	A	1507.14	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=9.360;DP=436;FS=4.212;HRun=0;HaplotypeScore=67.9076;InbreedingCoeff=0.7057;MQ=68.01;MQ0=0;MQRankSum=3.492;QD=11.77;ReadPosRankSum=2.630;VQSLOD=2.7711;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:18:21.07:299,21,0	1/1:2,13:15:18.06:256,18,0	0/0:12,0:10:17.71:0,18,162	0/1:13,0:11:1.15:1,0,6	1/1:6,19:25:56.51:521,57,0	0/0:17,0:17:36.05:0,36,571	0/0:18,0:18:39.02:0,39,503	0/0:28,0:27:66.14:0,66,924	0/0:7,0:7:15.05:0,15,304	0/0:21,0:21:54.15:0,54,927	0/0:15,0:15:35.74:0,36,525	1/1:4,4:8:6.02:85,6,0	1/1:4,4:8:12.04:171,12,0	0/0:10,0:10:21.03:0,21,318	0/0:16,0:16:33.07:0,33,561	1/1:2,5:7:6.02:85,6,0	0/0:14,0:14:24.05:0,24,402	0/0:16,0:20:44.98:0,45,516	0/0:25,0:25:66:0,66,965	0/0:29,0:29:59.95:0,60,941	0/0:10,0:10:27.02:0,27,386	0/0:5,0:5:8.99:0,9,75	0/0:8,0:8:20.73:0,21,333	0/0:12,0:12:33.07:0,33,573	0/0:17,0:17:48.14:0,48,882	0/1:23,0:23:38.80:180,0,39	0/0:24,0:24:57.09:0,57,920	0/1:11,0:11:24.27:88,0,24
chr10	102010630	.	GATA	G	1096.64	PASS	AB=1.000;AC=12;AF=0.222;AN=54;BaseQRankSum=9.493;DP=418;FS=7.597;HRun=0;HaplotypeScore=65.5512;InbreedingCoeff=0.3568;MQ=63.05;MQ0=0;MQRankSum=0.651;QD=9.06;ReadPosRankSum=4.386;VQSLOD=1.7014;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:83.64:84,0,112	0/1:16,0:16:54.55:69,0,55	0/1:10,0:8:0.88:1,0,15	0/0:7,0:5:7.80:0,8,53	0/1:25,0:25:76.03:76,0,112	0/0:15,0:15:42.08:0,42,662	0/0:13,0:13:24.08:0,24,440	0/0:36,0:36:59.26:0,59,983	0/0:7,0:7:21.05:0,21,363	0/0:20,0:20:45.14:0,45,820	0/0:18,0:18:42.08:0,42,629	1/1:4,0:4:5.88:35,6,0	0/1:6,0:6:10.33:51,0,10	0/0:7,0:7:12.04:0,12,238	0/0:14,0:14:36.09:0,36,626	0/1:10,0:10:11.65:12,0,107	0/0:13,0:13:36.05:0,36,524	0/0:17,0:17:36.52:0,37,467	0/0:30,0:28:60.07:0,60,992	0/0:23,0:23:48.11:0,48,848	0/0:8,0:8:15.05:0,15,311	./.	0/0:7,0:7:15.05:0,15,275	0/0:12,0:12:27.07:0,27,476	0/0:22,0:22:63.13:0,63,1032	1/1:3,16:19:48.11:642,48,0	0/0:25,0:25:63.13:0,63,1070	1/1:7,2:9:21.05:284,21,0
chr10	102012579	.	CTG	C	9821.86	PASS	AB=0.973;AC=25;AF=0.446;AN=56;BaseQRankSum=11.453;DP=972;FS=11.745;HRun=0;HaplotypeScore=140.5098;InbreedingCoeff=0.9412;MQ=55.78;MQ0=28;MQRankSum=0.347;QD=20.50;ReadPosRankSum=2.723;VQSLOD=4.8761;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,37:48:83.60:987,84,0	1/1:6,8:13:27.08:332,27,0	0/0:48,0:15:11.96:0,12,181	0/0:51,0:19:15.44:0,15,176	1/1:1,20:22:45.13:554,45,0	0/0:29,1:30:35.30:0,35,1045	0/0:32,0:31:61.20:0,61,1096	1/1:19,28:40:73.30:920,73,0	0/0:36,1:36:16.68:0,17,1281	0/1:35,1:36:3.25:3,0,929	0/0:17,0:17:35.95:0,36,536	1/1:11,15:26:59.08:753,59,0	1/1:16,10:24:44.62:562,45,0	0/0:29,0:28:69.22:0,69,1089	0/0:26,2:27:23.21:0,23,856	1/1:14,15:29:57.11:671,57,0	0/0:28,0:28:45.43:0,45,999	1/1:11,18:29:69.65:827,70,0	1/1:13,16:25:50.85:557,51,0	1/1:7,25:33:59.61:688,60,0	1/1:50,52:91:99:2160,177,0	0/0:37,2:39:19.46:0,19,1287	0/0:27,0:27:75.24:0,75,1177	0/0:44,0:44:90.31:0,90,1433	0/0:28,0:28:35.47:0,35,1041	0/0:40,0:39:99:0,99,1534	1/1:5,27:33:56.15:809,56,0	0/0:14,0:12:21.98:0,22,284
chr10	102012649	.	C	CTG	14628.28	PASS	AB=0.973;AC=27;AF=0.482;AN=56;BaseQRankSum=-9.215;DP=1065;FS=4.880;HRun=0;HaplotypeScore=180.8672;InbreedingCoeff=0.9018;MQ=56.89;MQ0=30;MQRankSum=-1.263;QD=28.40;ReadPosRankSum=2.019;VQSLOD=5.6938;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,37:54:99:1762,111,0	1/1:3,11:12:29.82:496,30,0	0/0:51,0:25:37.87:0,38,484	0/0:58,0:34:29.85:0,30,408	1/1:15,13:28:39.42:816,39,0	0/0:33,0:33:78.05:0,78,937	0/0:47,0:46:99:0,102,1259	1/1:16,35:51:99:1649,112,0	0/0:47,0:46:99:0,105,1256	0/0:49,0:47:99:0,129,1560	0/0:18,0:18:48.15:0,48,611	1/1:5,20:23:57.10:921,57,0	1/1:9,21:28:45.85:853,46,0	0/0:30,0:30:72.06:0,72,843	0/0:23,0:22:50.95:0,51,647	1/1:4,25:26:63.22:1050,63,0	0/0:35,1:36:21.91:0,22,998	1/1:7,35:41:90.28:1448,90,0	1/1:12,6:18:33.44:644,33,0	1/1:12,14:24:45.14:724,45,0	1/1:31,90:109:99:3101,193,0	0/0:46,0:45:99:0,114,1405	0/0:28,0:27:66.20:0,66,820	0/0:52,1:52:99:0,112,1795	0/0:30,0:28:68.71:0,69,848	0/1:35,1:30:98:500,0,98	1/1:10,11:19:3.91:562,4,0	1/1:13,1:12:11.06:102,11,0
chr10	102012659	.	GTC	G	402.81	PASS	AB=0.965;AC=8;AF=0.143;AN=56;BaseQRankSum=9.576;DP=1130;FS=6.848;HRun=0;HaplotypeScore=217.7583;InbreedingCoeff=0.1240;MQ=52.80;MQ0=46;MQRankSum=-0.682;QD=1.72;ReadPosRankSum=-6.563;VQSLOD=-0.0786;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:57:30.67:0,31,1039	0/0:14,0:11:8.58:0,9,254	0/0:42,0:16:37.83:0,38,513	0/1:43,0:24:19.45:19,0,345	0/1:29,0:29:19.06:19,0,443	0/0:33,0:33:84.09:0,84,1338	0/0:54,0:50:99:0,108,1892	0/1:56,0:49:47.20:47,0,948	0/0:48,0:47:99:0,118,1885	0/0:55,0:51:99:0,138,2370	0/0:22,0:21:57.06:0,57,990	0/1:29,0:27:2.30:2,0,506	0/0:31,0:30:42.12:0,42,621	0/0:32,0:31:81.21:0,81,1385	0/0:26,0:24:59.82:0,60,935	0/0:33,0:30:49.91:0,50,682	0/0:42,0:42:99:0,116,1792	0/0:44,0:43:21.24:0,21,798	0/1:28,0:27:57.01:57,0,440	0/0:28,0:26:29.97:0,30,455	0/0:139,0:121:77.72:0,78,1885	0/0:47,0:46:99:0,129,2167	0/0:26,0:25:56.20:0,56,1166	0/0:59,0:58:99:0,156,2799	0/0:34,0:31:75.06:0,75,1265	0/1:27,8:27:99:315,0,219	0/0:21,0:19:22.31:0,22,430	1/1:10,2:10:11.76:77,12,0
chr10	102012771	.	C	CTG	1685.46	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.384;DP=1099;FS=0.597;HRun=0;HaplotypeScore=161.0933;InbreedingCoeff=0.9693;MQ=61.25;MQ0=6;MQRankSum=-4.998;QD=35.11;ReadPosRankSum=-1.251;VQSLOD=4.7753;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:77,0:75:99:0,180,2504	0/0:15,0:15:45.13:0,45,614	0/0:55,0:28:59.47:0,59,695	0/0:68,0:37:64.37:0,64,887	0/0:29,0:29:78.17:0,78,1051	0/0:32,0:32:78.24:0,78,1090	0/0:35,0:35:99:0,102,1357	0/0:48,0:48:99:0,129,1631	0/0:36,0:36:96.16:0,96,1345	0/0:45,0:45:99:0,132,1799	0/0:14,0:14:42.12:0,42,578	0/0:42,0:42:99:0,105,1477	0/0:35,0:35:96.28:0,96,1316	0/0:34,0:34:96.28:0,96,1313	0/0:42,0:42:99:0,114,1591	0/0:32,0:32:87.24:0,87,1166	0/0:33,0:32:84.24:0,84,1143	0/0:40,0:40:99:0,105,1436	0/0:20,0:17:42.07:0,42,540	0/0:30,0:30:78.20:0,78,1104	0/0:100,0:97:99:0,248,3422	0/0:44,0:44:99:0,117,1598	0/0:27,0:27:75.19:0,75,1039	0/0:61,0:61:99:0,153,2164	0/0:32,0:32:84.03:0,84,1093	1/1:20,22:41:99:1640,102,0	0/0:25,0:25:72.15:0,72,960	1/1:1,3:4:9.03:160,9,0
chr10	102012789	.	G	GTC	1655.63	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.275;DP=1132;FS=3.705;HRun=0;HaplotypeScore=161.1825;InbreedingCoeff=0.9692;MQ=60.00;MQ0=8;MQRankSum=-3.665;QD=33.79;ReadPosRankSum=-0.456;VQSLOD=4.8783;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:86,0:84:99:0,216,2775	0/0:17,0:17:48.08:0,48,586	0/0:62,0:32:67.37:0,67,752	0/0:67,0:40:95.27:0,95,1086	0/0:28,0:28:69.18:0,69,942	0/0:31,0:31:75.13:0,75,995	0/0:32,0:32:90.11:0,90,1226	0/0:47,0:46:99:0,130,1455	0/0:45,0:45:99:0,114,1515	0/0:41,0:41:99:0,114,1391	0/0:15,0:15:39.03:0,39,459	0/0:41,0:41:99:0,105,1386	0/0:43,0:43:99:0,117,1429	0/0:35,0:35:96.22:0,96,1256	0/0:44,0:43:99:0,117,1469	0/0:36,0:36:99:0,102,1187	0/0:30,0:29:71.05:0,71,867	0/0:40,0:40:92.26:0,92,1226	0/0:23,0:20:44.85:0,45,504	0/0:30,0:30:81.12:0,81,1074	0/0:99,0:96:99:0,249,3137	0/0:43,0:43:99:0,123,1582	0/0:31,0:31:85.38:0,85,1092	0/0:62,0:62:99:0,160,2082	0/0:31,0:31:87.16:0,87,1078	1/1:11,33:42:65.43:1609,65,0	0/0:24,0:22:64.04:0,64,840	1/1:0,3:3:9.03:160,9,0
chr10	102013619	.	T	TC	2186.68	PASS	AB=0.706;AC=24;AF=0.429;AN=56;BaseQRankSum=-2.021;DP=523;FS=9.930;HRun=10;HaplotypeScore=69.6131;InbreedingCoeff=0.5195;MQ=78.32;MQ0=0;MQRankSum=-0.651;QD=8.22;ReadPosRankSum=-3.345;VQSLOD=0.6447;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,12:24:8.25:114,0,8	0/1:4,2:6:9.76:95,0,10	0/1:20,1:20:8.61:9,0,137	0/0:18,0:16:8.28:0,8,106	1/1:5,15:20:5.44:263,5,0	0/0:17,0:18:43.96:0,44,347	0/0:30,0:35:47.58:0,48,472	1/1:16,0:17:3.31:15,3,0	0/0:16,0:17:37.97:0,38,301	0/0:16,0:16:23.93:0,24,197	0/0:12,1:13:0.97:0,1,214	1/1:5,9:14:21.03:213,21,0	0/1:9,15:24:3.57:171,0,4	0/0:21,1:24:21.23:0,21,368	0/0:25,0:28:60.98:0,61,480	0/1:10,18:28:99:272,0,100	0/0:18,0:19:52.98:0,53,424	1/1:7,10:17:14.41:333,14,0	1/1:9,4:14:20.75:187,21,0	1/1:2,1:12:11.66:80,12,0	0/1:14,13:27:11.22:85,0,11	0/0:16,0:16:32.89:0,33,263	0/0:14,0:14:20.85:0,21,161	0/0:23,0:25:58.42:0,58,449	0/0:13,0:14:22.97:0,23,178	1/1:6,2:15:19.42:158,19,0	1/1:17,4:22:38.48:313,38,0	1/1:5,0:5:11.10:76,11,0
chr10	102014116	.	T	TAC	7316.59	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-14.810;DP=782;FS=1.080;HRun=0;HaplotypeScore=97.1184;InbreedingCoeff=0.9217;MQ=67.07;MQ0=6;MQRankSum=0.932;QD=30.74;ReadPosRankSum=0.181;VQSLOD=6.1812;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,34:48:66.23:1055,66,0	1/1:1,10:11:30.10:480,30,0	0/0:38,0:31:53.84:0,54,561	0/0:33,0:26:2.75:0,3,171	1/1:6,21:27:27.25:923,27,0	0/0:24,0:24:16.46:0,16,561	0/0:24,0:24:51.16:0,51,611	1/1:19,24:44:43.07:1134,43,0	0/0:31,0:31:84.26:0,84,1007	0/0:35,0:35:90.27:0,90,1072	0/0:23,0:23:54.15:0,54,636	1/1:3,23:25:60.20:959,60,0	1/1:6,22:28:63.21:1007,63,0	0/0:15,0:16:42.12:0,42,492	0/0:30,0:30:78.23:0,78,923	1/1:5,19:23:12.20:684,12,0	0/0:20,0:19:48.15:0,48,575	1/1:8,22:30:38.50:1074,39,0	0/0:24,0:24:0.14:0,0,492	0/0:31,0:32:69.03:0,69,794	0/0:32,0:33:90.09:0,90,1042	0/0:26,0:26:66.18:0,66,769	0/0:32,1:32:42.25:0,42,967	0/0:25,0:25:66.16:0,66,775	0/0:29,0:29:66.02:0,66,758	0/0:29,0:31:78.06:0,78,903	0/0:21,0:21:45.12:0,45,526	0/0:14,0:14:36.11:0,36,432
chr10	102015458	.	TAC	T	7288.45	PASS	AB=0.625;AC=23;AF=0.411;AN=56;BaseQRankSum=14.474;DP=782;FS=5.202;HRun=0;HaplotypeScore=154.4068;InbreedingCoeff=0.9116;MQ=71.46;MQ0=13;MQRankSum=-8.446;QD=24.21;ReadPosRankSum=2.845;VQSLOD=5.7452;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,27:38:47.48:712,47,0	1/1:3,13:16:42.59:509,43,0	0/0:57,0:43:75.88:0,76,1092	0/0:50,0:44:31.87:0,32,903	1/1:8,29:36:62.93:781,63,0	0/0:25,0:25:72.23:0,72,1135	0/0:21,0:21:60.19:0,60,952	1/1:12,13:25:54.16:650,54,0	0/0:16,0:16:48.16:0,48,787	0/0:29,0:29:66.22:0,66,1069	0/0:33,0:33:87.24:0,87,1387	1/1:5,11:16:36.07:429,36,0	1/1:6,30:35:72.39:1024,72,0	0/0:28,0:28:72.22:0,72,1132	0/0:28,0:28:69.22:0,69,1106	1/1:3,22:25:51.13:732,51,0	0/0:47,0:47:99:0,126,2047	0/1:6,9:12:14.31:267,0,14	1/1:9,6:15:36.09:419,36,0	1/1:8,24:33:81.24:991,81,0	1/1:9,6:11:15.05:186,15,0	0/0:23,0:23:66.21:0,66,1051	0/0:22,0:22:51.17:0,51,836	0/0:39,2:41:30.96:0,31,1489	0/0:17,0:17:19.61:0,20,747	0/0:39,0:39:99:0,108,1766	1/1:10,15:24:10.61:589,11,0	0/0:4,0:4:9.03:0,9,147
chr10	102015492	.	G	GAGAGAA	8333.89	PASS	AB=0.965;AC=20;AF=0.357;AN=56;BaseQRankSum=16.965;DP=870;FS=19.948;HRun=0;HaplotypeScore=264.5649;InbreedingCoeff=0.3649;MQ=54.30;MQ0=18;MQRankSum=-12.808;QD=19.43;ReadPosRankSum=-4.415;VQSLOD=2.4517;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,10:42:69.04:948,69,0	0/1:16,2:18:5.53:511,0,6	0/0:48,0:16:4.91:0,5,355	0/0:63,0:33:29.58:0,30,501	1/1:33,5:36:30.74:452,31,0	0/0:24,0:24:66.02:0,66,1193	0/0:27,0:27:78.11:0,78,1271	0/1:37,0:37:62.71:303,0,63	0/0:19,0:19:57.17:0,57,1089	0/0:28,0:28:81.22:0,81,1436	0/0:28,0:28:72.19:0,72,1241	1/1:19,7:23:4.34:619,4,0	1/1:32,6:37:55.06:1306,55,0	0/0:22,0:22:63.08:0,63,1218	0/0:28,0:28:72.20:0,72,1361	1/1:27,7:31:44.75:1075,45,0	0/0:38,0:38:99:0,108,2091	0/1:18,1:15:10.33:411,0,10	0/1:33,2:32:99:714,0,106	0/1:32,3:35:18.75:551,0,19	0/1:20,0:16:37.66:171,0,38	0/0:21,0:21:54.12:0,54,873	0/0:26,0:26:66.17:0,66,1189	0/0:39,0:39:99:0,108,2035	0/0:30,0:30:87.18:0,87,1587	0/1:43,0:43:99:337,0,1051	1/1:26,4:29:17.90:780,18,0	0/1:8,0:8:73.04:157,0,73
chr10	102015494	.	G	GAC	225.75	PASS	AB=0.863;AC=3;AF=0.054;AN=56;BaseQRankSum=4.909;DP=873;FS=13.170;HRun=0;HaplotypeScore=241.1443;InbreedingCoeff=-0.0487;MQ=54.20;MQ0=14;MQRankSum=-5.154;QD=2.28;ReadPosRankSum=3.663;VQSLOD=1.1892;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:43:71.94:0,72,522	0/0:18,0:18:42.96:0,43,362	0/1:47,0:16:1.73:2,0,369	0/0:65,0:32:40.91:0,41,571	0/0:38,0:37:66.96:0,67,474	0/0:25,0:25:69.19:0,69,989	0/0:26,0:26:78.18:0,78,1058	0/0:39,0:39:86.29:0,86,684	0/0:19,0:19:57.18:0,57,849	0/0:27,0:27:81.18:0,81,1107	0/0:28,0:28:84.17:0,84,1113	0/0:26,0:23:50.84:0,51,424	0/0:38,0:37:78.05:0,78,759	0/0:22,0:22:66.08:0,66,930	0/0:27,0:27:78.19:0,78,1084	0/0:35,0:32:75.92:0,76,610	0/0:37,0:37:99:0,108,1556	0/0:20,0:16:33.47:0,33,317	0/0:34,0:31:48.02:0,48,525	0/0:34,0:34:89.44:0,89,655	0/0:18,0:16:29.54:0,30,202	0/0:23,0:23:63.10:0,63,794	0/0:27,0:27:66.18:0,66,943	0/0:39,0:39:99:0,117,1626	0/0:31,0:31:87.14:0,87,1222	0/1:37,7:44:99:230,0,294	0/0:31,0:29:63.53:0,64,582	0/1:5,3:8:57.12:84,0,57
chr10	102015512	.	GACA	G	6350.93	PASS	AB=0.691;AC=13;AF=0.232;AN=56;BaseQRankSum=11.562;DP=829;FS=1.127;HRun=0;HaplotypeScore=201.7960;InbreedingCoeff=-0.1426;MQ=55.35;MQ0=17;MQRankSum=-11.508;QD=17.99;ReadPosRankSum=5.862;VQSLOD=4.6777;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:32,14:40:99:418,0,116	0/1:7,6:13:99:326,0,115	0/0:41,0:16:38.99:0,39,638	0/0:57,0:25:44.30:0,44,710	0/1:23,16:38:79.75:206,0,80	0/0:23,0:23:66.23:0,66,1431	0/0:25,0:25:75.26:0,75,1763	0/1:12,35:43:99:1620,0,148	0/0:19,0:19:57.18:0,57,1248	0/0:29,0:29:87.29:0,87,1955	0/0:32,0:32:90.77:0,91,1897	0/1:17,14:26:99:614,0,202	0/1:22,8:28:99:438,0,648	0/0:20,0:20:60.21:0,60,1417	0/0:26,0:26:78.25:0,78,1753	0/1:18,12:27:99:685,0,407	0/0:40,0:40:99:0,120,2675	0/1:8,10:13:99:169,0,240	0/1:9,13:21:99:436,0,114	0/1:20,12:30:99:508,0,175	1/1:6,14:18:4.77:214,5,0	0/0:20,0:20:54.19:0,54,1173	0/0:22,0:22:54.18:0,54,1244	0/0:36,0:36:99:0,108,2528	0/0:36,0:36:99:0,102,2295	0/0:37,0:37:99:0,111,2291	0/1:13,12:25:99:717,0,330	0/0:10,0:10:27.09:0,27,483
chr10	102015515	.	A	AGAG	5837.80	PASS	AB=0.880;AC=16;AF=0.286;AN=56;BaseQRankSum=13.335;DP=811;FS=2.464;HRun=0;HaplotypeScore=198.1524;InbreedingCoeff=0.0273;MQ=57.28;MQ0=17;MQRankSum=-12.515;QD=15.20;ReadPosRankSum=5.316;VQSLOD=4.5581;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,12:38:48.39:432,0,48	1/1:11,2:13:4.07:322,4,0	0/0:47,0:20:42.10:0,42,615	0/0:60,0:28:52.29:0,52,765	0/1:30,6:35:10.39:119,0,10	0/0:22,0:22:57.19:0,57,949	0/0:25,0:25:72.25:0,72,1199	0/1:46,1:43:0.22:1204,0,0	0/0:18,0:18:48.15:0,48,773	0/0:28,0:28:81.28:0,81,1348	0/0:32,0:32:84.29:0,84,1384	0/1:21,7:24:75.10:574,0,75	0/1:22,6:26:99:522,0,286	0/0:20,0:20:57.19:0,57,949	0/0:25,0:25:72.22:0,72,1150	0/1:22,7:26:99:675,0,186	0/0:38,0:38:99:0,108,1799	0/1:15,1:11:64.56:175,0,65	0/1:20,3:22:1.80:566,0,2	0/1:26,5:29:99:327,0,106	1/1:18,0:17:12.04:148,12,0	0/0:18,0:18:45.14:0,45,724	0/0:22,0:22:48.16:0,48,799	0/0:35,0:35:99:0,99,1649	0/0:37,0:37:99:0,99,1643	0/1:35,0:35:71.97:72,0,827	0/1:20,5:24:99:660,0,131	0/1:10,0:10:42.86:43,0,251
chr10	102015909	.	A	ATTG	6469.36	PASS	AB=0.629;AC=17;AF=0.304;AN=56;BaseQRankSum=4.999;DP=695;FS=8.075;HRun=0;HaplotypeScore=99.0068;InbreedingCoeff=0.8871;MQ=67.82;MQ0=1;MQRankSum=-0.967;QD=28.13;ReadPosRankSum=1.469;VQSLOD=4.5934;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,29:38:5.46:861,5,0	1/1:6,13:20:39.13:769,39,0	0/0:22,0:20:29.96:0,30,360	0/0:32,0:31:21.38:0,21,474	1/1:8,13:23:36.12:618,36,0	0/0:22,0:22:42.10:0,42,546	0/0:22,0:23:51.12:0,51,687	0/0:24,0:24:45.13:0,45,607	0/0:27,0:27:63.21:0,63,897	0/0:34,0:34:75.25:0,75,1066	0/0:22,0:22:46.36:0,46,654	1/1:5,20:25:12.18:644,12,0	1/1:10,18:29:30.10:602,30,0	0/0:25,0:25:63.21:0,63,894	0/0:27,0:27:57.13:0,57,751	1/1:8,23:31:49.30:1086,49,0	0/0:16,0:16:42.14:0,42,598	0/1:9,13:22:6.59:632,0,7	0/0:15,0:15:18.06:0,18,253	0/0:23,0:23:34.36:0,34,503	0/0:24,0:24:51.17:0,51,726	0/0:26,0:26:53.91:0,54,727	0/0:24,0:24:48.05:0,48,648	0/0:23,0:23:45.15:0,45,641	0/0:23,0:23:60.17:0,60,837	1/1:8,20:29:60.16:1135,60,0	0/0:32,0:32:84.26:0,84,1159	1/1:5,8:13:6.02:121,6,0
chr10	102018045	.	TGATA	T	1548.02	PASS	AB=0.765;AC=22;AF=0.458;AN=48;BaseQRankSum=7.179;DP=448;FS=2.504;HRun=0;HaplotypeScore=112.0003;InbreedingCoeff=0.4633;MQ=56.99;MQ0=9;MQRankSum=-2.797;QD=8.80;ReadPosRankSum=-2.780;VQSLOD=2.5079;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:19:1.16:0,1,39	./.	./.	./.	0/0:11,0:17:11.65:0,12,65	0/0:25,0:25:42.10:0,42,847	0/0:12,0:13:0:0,0,0	./.	0/0:21,0:21:30.08:0,30,570	0/0:23,0:23:27.09:0,27,541	0/0:12,0:12:12.03:0,12,236	0/1:9,0:14:31.64:48,0,32	1/1:7,0:10:3.63:10,4,0	1/1:4,0:15:23.82:191,24,0	0/0:13,0:13:18.03:0,18,331	0/1:7,0:13:40.16:70,0,40	0/0:21,0:23:30.06:0,30,655	1/1:9,0:13:3:28,3,0	1/1:10,4:12:12.04:184,12,0	1/1:12,13:25:27.09:416,27,0	0/0:12,0:13:0:0,0,0	1/1:3,3:6:6.02:92,6,0	1/1:1,0:12:23.71:177,24,0	1/1:2,0:5:2.92:17,3,0	0/0:19,0:19:24.03:0,24,381	0/1:17,0:21:87.19:91,0,87	1/1:10,10:20:24.08:370,24,0	0/1:6,0:8:14.97:22,0,15
chr10	102018119	.	AAG	A	4346.64	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.387;DP=420;FS=1.531;HRun=0;HaplotypeScore=100.7422;InbreedingCoeff=0.9455;MQ=72.29;MQ0=2;MQRankSum=-1.384;QD=33.18;ReadPosRankSum=3.275;VQSLOD=7.2776;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:18:39.13:518,39,0	1/1:0,3:3:9.03:120,9,0	0/0:21,0:17:29.85:0,30,420	0/0:17,0:14:14.06:0,14,125	1/1:3,20:23:48:639,48,0	0/0:25,0:25:72.23:0,72,1213	0/0:15,0:14:36.12:0,36,609	0/0:37,0:37:90.29:0,90,1507	0/0:14,0:14:42.14:0,42,724	0/0:15,0:15:42.14:0,42,725	0/0:14,0:14:42.14:0,42,724	1/1:3,18:21:51.17:678,51,0	1/1:2,12:14:36.12:479,36,0	0/0:11,0:11:24.08:0,24,415	0/0:8,0:8:24.08:0,24,412	1/1:1,10:11:30.10:399,30,0	0/0:23,0:23:57.16:0,57,928	1/1:0,14:14:42.14:557,42,0	0/0:10,0:10:27.08:0,27,437	0/0:21,0:21:60.20:0,60,1012	0/0:6,0:6:9.03:0,9,150	0/0:13,0:13:36.12:0,36,614	0/0:6,0:6:6.02:0,6,100	0/0:2,0:2:6.02:0,6,104	0/0:14,0:14:36.12:0,36,621	1/1:3,14:16:42.14:558,42,0	0/0:17,0:17:42.14:0,42,724	1/1:1,9:10:30.10:399,30,0
chr10	102018189	.	GTA	G	3069.76	PASS	AB=0.944;AC=22;AF=0.407;AN=54;BaseQRankSum=5.703;DP=307;FS=8.655;HRun=0;HaplotypeScore=50.6966;InbreedingCoeff=0.6709;MQ=68.17;MQ0=3;MQRankSum=0.975;QD=17.95;ReadPosRankSum=0.287;VQSLOD=2.7098;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,1:10:18.01:0,18,223	0/0:5,0:5:15.05:0,15,243	0/0:12,0:5:2.71:0,3,36	0/1:17,0:5:9.30:18,0,9	0/0:19,1:20:45.15:0,45,714	0/0:22,0:22:51.14:0,51,776	0/0:4,0:4:3.01:0,3,49	1/1:10,32:42:93.20:1060,93,0	0/0:5,0:5:3.01:0,3,49	0/0:9,0:9:21.07:0,21,340	0/0:11,0:11:24.05:0,24,337	0/0:11,0:11:21.07:0,21,338	0/0:2,0:2:3.01:0,3,49	0/0:4,0:4:3.01:0,3,49	1/1:0,5:5:15.05:183,15,0	0/1:7,1:8:18.61:19,0,193	1/1:9,16:26:41.82:490,42,0	0/0:9,0:11:1.38:0,1,90	1/1:4,4:8:14.86:146,15,0	1/1:2,6:9:11.84:108,12,0	1/1:0,6:6:12.04:147,12,0	0/0:4,0:4:9.03:0,9,146	0/0:5,0:5:15.05:0,15,239	./.	1/1:1,8:10:20.90:234,21,0	1/1:5,3:7:21.02:219,21,0	1/1:3,15:21:41.46:422,41,0	1/1:4,6:8:18.06:220,18,0
chr10	102019001	.	C	CAT	3127.85	PASS	AB=0.844;AC=13;AF=0.232;AN=56;BaseQRankSum=1.993;DP=675;FS=3.035;HRun=0;HaplotypeScore=99.2854;InbreedingCoeff=0.6602;MQ=51.14;MQ0=37;MQRankSum=1.991;QD=15.96;ReadPosRankSum=3.610;VQSLOD=3.7929;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:30,5:33:0.11:448,0,0	1/1:6,0:6:9.02:132,9,0	0/0:23,0:5:11.97:0,12,97	0/0:45,0:8:17.86:0,18,158	0/1:18,2:19:0.72:120,0,1	0/0:19,0:17:38.78:0,39,466	0/0:29,0:28:65.97:0,66,666	0/0:32,0:27:72.28:0,72,551	0/0:30,0:30:47.94:0,48,505	0/0:23,0:22:59.71:0,60,580	0/0:29,0:29:74.90:0,75,790	0/1:24,0:24:3.29:427,0,3	0/1:19,3:21:1.82:392,0,2	0/0:18,0:18:30.48:0,30,423	0/0:30,0:28:77.69:0,78,721	1/1:27,9:36:40.54:867,41,0	0/0:33,0:31:80.84:0,81,763	1/1:12,0:12:20.62:191,21,0	0/0:11,0:10:29.62:0,30,215	0/0:11,0:11:14.66:0,15,125	0/0:38,0:35:65.87:0,66,564	0/0:21,0:19:41.96:0,42,394	0/0:16,0:16:39.01:0,39,413	0/0:36,0:35:83.91:0,84,799	0/0:17,0:16:35.65:0,36,327	0/1:6,22:29:18.55:549,0,19	0/0:18,0:18:42.26:0,42,321	1/1:2,9:11:9.03:173,9,0
chr10	102019015	.	C	CCA	1476.23	PASS	AB=0.655;AC=11;AF=0.196;AN=56;BaseQRankSum=8.123;DP=698;FS=0.000;HRun=0;HaplotypeScore=112.8480;InbreedingCoeff=0.5350;MQ=53.77;MQ0=34;MQRankSum=-0.759;QD=9.34;ReadPosRankSum=4.382;VQSLOD=3.2709;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,17:32:25.84:304,0,26	1/1:2,3:5:3.01:47,3,0	0/0:36,0:11:26.90:0,27,271	0/0:53,0:18:27.52:0,28,314	1/1:5,12:19:12.04:173,12,0	0/0:19,0:18:38.61:0,39,421	0/0:27,0:27:57.08:0,57,663	0/0:31,0:26:48.14:0,48,581	0/0:31,0:31:56.33:0,56,680	0/0:23,0:22:31.60:0,32,351	0/0:31,0:31:51.14:0,51,600	0/1:14,11:26:23.28:135,0,23	0/1:11,12:26:30:407,0,30	0/0:19,0:18:29.78:0,30,350	0/0:28,0:26:60.06:0,60,675	1/1:8,25:35:8:512,8,0	0/0:35,0:33:77.57:0,78,886	1/1:3,0:11:6:51,6,0	0/0:14,0:13:21.06:0,21,250	0/0:15,0:15:20.72:0,21,229	0/0:38,0:37:46.95:0,47,644	0/0:18,0:16:30.09:0,30,360	0/0:15,0:15:27.05:0,27,298	0/0:35,0:34:69.15:0,69,807	0/0:16,0:16:23.75:0,24,288	0/0:24,0:26:39.33:0,39,506	0/0:18,0:18:39.10:0,39,440	0/0:9,0:8:5.36:0,5,51
chr10	102019612	.	T	TAC	721.75	PASS	AB=0.911;AC=12;AF=0.240;AN=50;BaseQRankSum=-1.762;DP=515;FS=0.000;HRun=0;HaplotypeScore=84.0390;InbreedingCoeff=0.2484;MQ=55.67;MQ0=14;MQRankSum=-0.973;QD=4.88;ReadPosRankSum=-2.279;VQSLOD=2.1204;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,2:29:13.50:109,0,13	1/1:3,3:6:6.02:89,6,0	./.	./.	1/1:7,6:14:5.97:89,6,0	0/0:11,0:12:3.92:0,4,43	0/0:31,0:31:24.14:0,24,237	0/1:18,0:18:0:0,0,0	0/0:8,0:9:5.85:0,6,46	0/0:11,0:12:18.08:0,18,136	0/0:9,0:9:6.01:0,6,65	0/1:11,7:17:14.31:187,0,14	1/1:9,3:12:11.93:177,12,0	0/0:11,0:11:6.02:0,6,64	0/0:10,0:10:9.01:0,9,89	0/1:12,4:17:25.64:174,0,26	0/0:21,0:21:9.49:0,9,165	0/0:18,0:29:10.37:0,10,98	./.	0/0:12,0:13:6.38:0,6,26	0/0:8,0:20:11.36:0,11,56	0/1:11,0:12:27.12:27,0,56	0/0:18,0:18:15.51:0,16,163	0/0:31,0:37:26.90:0,27,273	0/0:15,0:18:11.69:0,12,93	0/1:20,0:20:11.64:12,0,90	0/0:9,0:11:11.32:0,11,75	0/0:6,0:7:14.83:0,15,131
chr10	102020998	.	CG	C	5287.21	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=14.371;DP=557;FS=3.688;HRun=1;HaplotypeScore=71.0603;InbreedingCoeff=0.8603;MQ=64.60;MQ0=0;MQRankSum=1.284;QD=32.24;ReadPosRankSum=1.089;VQSLOD=4.5424;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:42.14:582,42,0	1/1:0,13:13:32.91:369,33,0	0/1:9,0:8:12.54:13,0,66	0/1:4,0:3:1.68:2,0,43	1/1:0,38:38:99:1387,111,0	0/0:34,0:34:99:0,102,1427	0/0:21,0:21:60.05:0,60,863	0/0:29,0:29:84.12:0,84,1186	0/0:13,0:13:39.10:0,39,566	0/0:27,0:27:81.04:0,81,1202	0/0:31,0:31:93.14:0,93,1363	1/1:2,22:24:63.39:934,63,0	1/1:0,14:14:27.08:375,27,0	0/0:23,0:23:69.20:0,69,1032	0/0:19,0:19:57.13:0,57,844	1/1:0,19:19:54.18:751,54,0	0/0:18,0:18:54.14:0,54,799	1/1:0,26:26:63.21:875,63,0	0/0:17,0:17:51.06:0,51,682	0/0:24,0:24:68.97:0,69,920	0/0:7,0:7:18.04:0,18,260	0/0:19,0:19:57.13:0,57,843	0/0:21,0:21:63.11:0,63,911	0/0:10,0:10:30.03:0,30,420	0/0:31,0:31:93.30:0,93,1441	0/0:17,0:19:56.05:0,56,429	0/0:23,0:23:69.22:0,69,1057	0/0:7,0:7:20.98:0,21,178
chr10	102020999	.	G	GTTT	1044.27	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.610;DP=559;FS=1.775;HRun=9;HaplotypeScore=109.6150;InbreedingCoeff=0.8030;MQ=64.55;MQ0=0;MQRankSum=-6.125;QD=37.30;ReadPosRankSum=-1.358;VQSLOD=3.0512;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:41.57:0,42,286	0/0:13,0:13:20.79:0,21,143	0/0:9,0:8:0.24:0,0,33	0/0:4,0:3:2.98:0,3,31	0/0:38,0:38:88.72:0,89,603	0/0:34,0:34:87.23:0,87,1070	0/0:21,0:21:54.15:0,54,668	0/0:30,0:30:66.07:0,66,798	0/0:13,0:13:36.09:0,36,441	0/0:27,0:27:75.23:0,75,948	0/0:31,0:31:84.25:0,84,1048	0/0:23,0:23:68.43:0,68,481	0/0:14,0:14:26.54:0,27,184	0/0:23,0:23:63.17:0,63,781	0/0:19,0:19:51.15:0,51,644	0/0:19,0:19:53.56:0,54,369	0/0:18,0:18:51.13:0,51,629	0/0:26,0:26:62.45:0,62,430	0/0:16,0:17:38.97:0,39,451	0/0:24,0:24:51.12:0,51,644	0/0:7,0:7:15.03:0,15,190	0/0:19,0:19:48.10:0,48,591	0/0:21,0:21:54.14:0,54,668	0/0:10,0:10:24.07:0,24,303	0/0:31,0:31:87.25:0,87,1099	1/1:8,11:20:42.14:825,42,0	0/0:23,0:23:66.21:0,66,834	1/1:1,5:8:21.03:339,21,0
chr10	102021014	.	T	TC	1008.99	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.569;DP=550;FS=2.566;HRun=1;HaplotypeScore=80.3907;InbreedingCoeff=0.9629;MQ=69.29;MQ0=0;MQRankSum=-5.364;QD=37.37;ReadPosRankSum=-0.040;VQSLOD=3.9986;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.16:0,57,723	0/0:8,0:8:21.07:0,21,273	0/0:14,0:13:31.45:0,31,373	0/0:5,0:4:9:0,9,100	0/0:35,0:35:96.28:0,96,1215	0/0:27,0:27:81.26:0,81,1051	0/0:25,0:25:69.20:0,69,868	0/0:31,0:31:84.26:0,84,1066	0/0:13,0:13:39.07:0,39,448	0/0:28,0:28:78.22:0,78,949	0/0:31,0:31:93.30:0,93,1193	0/0:24,0:24:69.22:0,69,892	0/0:13,0:13:36.11:0,36,454	0/0:23,0:23:69.19:0,69,854	0/0:19,0:19:54.15:0,54,672	0/0:20,0:20:57.16:0,57,705	0/0:17,0:17:51.17:0,51,661	0/0:26,0:26:69.19:0,69,862	0/0:14,0:14:42.10:0,42,515	0/0:21,0:21:63.19:0,63,803	0/0:6,0:6:18.04:0,18,209	0/0:18,0:18:51.17:0,51,662	0/0:22,0:22:63.18:0,63,779	0/0:9,0:9:27.07:0,27,335	0/0:29,0:29:87.27:0,87,1105	1/1:3,16:19:57.06:771,57,0	0/0:25,0:25:75.22:0,75,935	1/1:0,8:8:24.08:359,24,0
chr10	102022145	.	C	CG	525.69	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.858;DP=601;FS=3.037;HRun=3;HaplotypeScore=58.8646;InbreedingCoeff=0.8602;MQ=85.47;MQ0=0;MQRankSum=-0.972;QD=25.03;ReadPosRankSum=-1.791;VQSLOD=2.6437;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,1652	0/0:3,0:3:9.03:0,9,107	0/0:22,0:22:40.56:0,41,505	0/0:15,0:15:4.42:0,4,177	0/0:21,0:21:57.13:0,57,666	0/0:20,0:20:57.17:0,57,678	0/0:18,0:18:54.16:0,54,635	0/0:32,0:32:87.08:0,87,956	0/0:23,0:23:69.21:0,69,825	0/0:29,0:29:84.23:0,84,977	0/0:18,0:18:51.16:0,51,610	0/0:19,0:19:54.16:0,54,636	0/0:18,0:18:51.09:0,51,591	0/0:18,0:18:48.15:0,48,574	0/0:20,0:20:51.11:0,51,594	0/0:12,0:12:36.07:0,36,414	0/0:31,0:31:93.26:0,93,1086	0/0:29,0:29:84.06:0,84,938	0/0:19,0:19:48.14:0,48,564	0/0:19,0:19:57.17:0,57,671	0/0:41,0:41:99:0,117,1370	0/0:20,0:20:51.99:0,52,594	0/0:19,0:19:51.16:0,51,609	0/0:19,0:19:57.13:0,57,666	0/0:21,0:20:63.17:0,63,738	1/1:3,14:18:12.25:509,12,0	0/0:24,0:24:69.10:0,69,804	1/1:0,3:3:9.03:125,9,0
chr10	102022904	.	TATAG	T	1136.63	PASS	AB=0.818;AC=11;AF=0.212;AN=52;BaseQRankSum=4.922;DP=434;FS=0.778;HRun=0;HaplotypeScore=105.3097;InbreedingCoeff=0.7629;MQ=62.51;MQ0=2;MQRankSum=-0.409;QD=12.92;ReadPosRankSum=1.482;VQSLOD=3.3224;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:21:13.69:0,14,281	0/0:3,0:5:12.01:0,12,146	./.	./.	0/0:17,0:18:30.10:0,30,681	0/0:16,0:27:36.11:0,36,601	0/0:8,0:8:8.24:0,8,148	0/0:37,0:37:15.02:0,15,237	0/0:15,0:15:30.10:0,30,679	0/0:15,0:15:21.07:0,21,493	0/0:13,0:13:27.09:0,27,634	0/0:15,0:15:17.88:0,18,373	1/1:0,10:10:21.07:324,21,0	0/0:10,0:10:24.08:0,24,555	1/1:5,9:15:24.08:370,24,0	0/0:8,0:14:15.05:0,15,267	0/0:15,0:14:17.09:0,17,376	1/1:11,3:14:9.03:133,9,0	0/0:21,0:21:30.10:0,30,702	0/0:30,0:30:66.23:0,66,1530	0/0:7,0:7:12.04:0,12,282	0/0:8,0:8:24.08:0,24,511	1/1:3,6:9:9.03:139,9,0	0/0:10,0:10:18.06:0,18,423	0/0:23,0:23:42.13:0,42,861	0/1:21,0:27:34.38:322,0,34	0/0:18,0:18:27.09:0,27,620	1/1:13,0:13:1.82:5,2,0
chr10	102023001	.	TGATA	T	1980.29	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.765;DP=459;FS=2.646;HRun=0;HaplotypeScore=144.9731;InbreedingCoeff=0.9734;MQ=56.85;MQ0=2;MQRankSum=-9.993;QD=23.30;ReadPosRankSum=-4.677;VQSLOD=2.5299;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:9,4:13:20.86:233,21,0	1/1:1,5:5:15.01:219,15,0	0/0:9,0:8:14.20:0,14,303	0/0:7,0:5:8.44:0,8,242	1/1:6,23:27:27.09:468,27,0	0/0:18,0:18:48.16:0,48,1207	0/0:11,0:11:27.08:0,27,648	0/0:38,0:37:99:0,105,2564	0/0:15,0:15:45.15:0,45,1138	0/0:17,0:17:48.16:0,48,1245	0/0:15,0:15:42.13:0,42,1038	1/1:1,10:11:30.07:467,30,0	1/1:0,5:5:15.05:256,15,0	0/0:15,0:15:45.15:0,45,1154	0/0:19,0:19:48.16:0,48,1234	1/1:6,4:10:26.90:346,27,0	0/0:25,0:25:52.58:0,53,1337	1/1:7,4:11:14.93:186,15,0	0/0:17,0:17:48.16:0,48,1197	0/0:16,0:16:42.14:0,42,1085	0/0:18,0:18:51.09:0,51,1236	0/0:13,0:13:33.11:0,33,857	0/0:22,0:22:66.23:0,66,1690	0/0:9,0:9:21.07:0,21,510	0/0:22,0:22:60.21:0,60,1519	0/0:26,0:25:75.20:0,75,1756	0/0:26,0:26:39.10:0,39,1771	0/0:16,0:16:25.15:0,25,593
chr10	102023039	.	T	TGATAGATA	5915.10	PASS	AB=0.561;AC=16;AF=0.286;AN=56;BaseQRankSum=0.058;DP=539;FS=1.600;HRun=0;HaplotypeScore=189.2106;InbreedingCoeff=0.7413;MQ=54.23;MQ0=2;MQRankSum=-7.999;QD=39.97;ReadPosRankSum=-0.507;VQSLOD=4.5111;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,1:12:14.91:289,15,0	1/1:3,5:6:12.04:255,12,0	0/0:18,0:6:0.55:0,1,20	0/0:14,0:6:5.91:0,6,84	1/1:15,7:25:35.94:667,36,0	0/0:15,0:15:39.12:0,39,859	0/0:10,0:12:16.87:0,17,294	0/0:40,0:39:63.19:0,63,1137	0/0:24,0:24:54.18:0,54,1257	0/0:19,0:19:42.14:0,42,996	0/0:19,0:19:42.13:0,42,908	1/1:10,10:21:42.14:1146,42,0	1/1:4,8:16:9.03:374,9,0	0/0:13,0:13:33.11:0,33,804	0/0:25,0:25:60.21:0,60,1426	0/1:4,13:17:50.60:795,0,51	0/0:23,0:24:47.42:0,47,900	1/1:4,1:8:11.99:216,12,0	0/0:20,0:20:48.15:0,48,961	0/0:21,0:21:51.16:0,51,1120	0/0:23,0:23:42.14:0,42,871	0/0:12,0:12:21.07:0,21,430	0/0:28,0:28:69.24:0,69,1518	0/0:11,0:11:11.98:0,12,311	0/0:18,0:18:42.14:0,42,1030	0/1:5,18:25:11.52:1672,0,12	0/0:34,0:35:41.75:0,42,1612	1/1:4,10:14:12.04:501,12,0
chr10	102023221	.	G	GTAGA	2364.14	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=6.048;DP=725;FS=1.775;HRun=0;HaplotypeScore=179.9744;InbreedingCoeff=0.1749;MQ=56.01;MQ0=10;MQRankSum=-2.485;QD=8.07;ReadPosRankSum=-1.420;VQSLOD=2.9612;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:40:10.69:0,11,339	0/0:11,0:11:12.46:0,12,129	0/1:18,0:6:0.25:0,0,1	0/0:7,0:4:1.82:0,2,5	1/1:46,0:44:44.98:990,45,0	0/0:20,0:20:42.13:0,42,621	0/1:8,0:8:31.44:31,0,66	0/0:40,0:36:24.06:0,24,318	0/0:25,0:25:57.17:0,57,876	0/0:33,0:33:78.27:0,78,1232	0/0:19,0:19:42.14:0,42,665	0/0:32,0:32:9.41:0,9,321	0/1:28,0:26:77.55:78,0,232	0/0:14,0:14:24.07:0,24,358	0/0:35,0:35:72.24:0,72,1118	0/0:22,0:20:4.33:0,4,264	0/1:17,0:17:35.08:35,0,183	0/0:14,0:14:14.35:0,14,234	0/1:23,0:23:99:144,0,277	0/1:62,0:62:99:271,0,1474	0/1:14,0:14:62.30:62,0,302	0/0:23,0:23:48.15:0,48,714	0/0:29,0:28:48.42:0,48,787	0/0:14,0:14:15.03:0,15,216	1/1:7,22:30:32.78:732,33,0	0/0:27,0:28:23.47:0,23,382	0/1:46,0:47:99:176,0,1163	0/0:21,0:22:11.17:0,11,365
chr10	102023251	.	A	AG	94.28	PASS	AB=0.710;AC=1;AF=0.018;AN=56;BaseQRankSum=8.268;DP=728;FS=10.434;HRun=0;HaplotypeScore=157.8162;InbreedingCoeff=-0.0247;MQ=54.16;MQ0=5;MQRankSum=-1.017;QD=2.14;ReadPosRankSum=4.226;VQSLOD=2.2874;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,1:41:51.68:0,52,299	0/0:10,0:10:23.40:0,23,147	0/0:15,0:4:7.55:0,8,120	0/0:8,0:5:7.57:0,8,87	0/1:26,18:42:33.40:169,0,33	0/0:23,0:23:69.20:0,69,943	0/0:6,0:6:14.99:0,15,161	0/0:37,0:33:96.22:0,96,1258	0/0:28,0:28:84.28:0,84,1175	0/0:42,0:42:99:0,120,1679	0/0:26,0:26:78.25:0,78,1074	0/0:30,0:30:49.07:0,49,292	0/0:28,3:29:50.34:0,50,257	0/0:19,0:19:54.18:0,54,754	0/0:28,0:28:84.28:0,84,1174	0/0:22,2:22:40.79:0,41,235	0/0:19,0:19:47.60:0,48,484	0/0:16,0:16:41.05:0,41,275	0/0:14,2:16:15.05:0,15,505	0/0:46,5:51:67.89:0,68,1691	0/0:16,0:16:23.44:0,23,450	0/0:22,0:22:66.20:0,66,892	0/0:29,0:28:84.19:0,84,1127	0/0:15,0:15:21.02:0,21,293	0/0:29,0:29:20.81:0,21,344	0/0:30,0:29:80.59:0,81,746	0/0:45,3:48:95.54:0,96,1613	0/0:21,0:21:49.47:0,49,313
chr10	102023252	.	A	ATAG	563.89	PASS	AB=0.891;AC=5;AF=0.089;AN=56;BaseQRankSum=7.501;DP=727;FS=9.787;HRun=0;HaplotypeScore=177.9402;InbreedingCoeff=-0.0950;MQ=53.31;MQ0=5;MQRankSum=-2.131;QD=3.20;ReadPosRankSum=2.072;VQSLOD=1.9945;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:40:33.09:0,33,402	0/0:10,0:10:23.98:0,24,218	0/1:15,0:4:3.45:3,0,140	0/0:7,0:4:6.91:0,7,99	0/1:27,18:43:47.61:539,0,48	0/0:23,0:23:69.20:0,69,1171	0/0:6,0:6:14.99:0,15,192	0/0:35,0:31:93.26:0,93,1464	0/0:28,0:28:84.29:0,84,1539	0/0:42,0:42:99:0,126,2238	0/0:26,0:26:78.25:0,78,1320	0/0:30,0:30:50.85:0,51,437	0/0:29,3:30:11.09:0,11,360	0/0:19,0:19:54.18:0,54,979	0/0:28,0:28:84.29:0,84,1500	0/0:22,2:22:47.30:0,47,415	0/0:19,0:19:47.84:0,48,593	0/0:16,0:16:21.92:0,22,343	0/1:14,2:16:44.75:45,0,610	0/1:48,5:53:76.24:76,0,2103	0/0:16,0:16:44.40:0,44,640	0/0:22,0:22:66.19:0,66,1102	0/0:29,0:28:84.22:0,84,1443	0/0:16,0:16:21.07:0,21,365	0/0:28,0:28:41.94:0,42,426	0/0:30,0:29:81.40:0,81,1076	0/1:44,3:47:8.58:9,0,1954	0/0:21,0:21:53.93:0,54,510
chr10	102023318	.	GTAGA	G	4020.93	PASS	AB=0.732;AC=13;AF=0.232;AN=56;BaseQRankSum=10.751;DP=667;FS=3.183;HRun=0;HaplotypeScore=126.5094;InbreedingCoeff=0.6929;MQ=56.15;MQ0=7;MQRankSum=-4.240;QD=22.98;ReadPosRankSum=-0.984;VQSLOD=3.3735;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,20:25:63.21:935,63,0	1/1:2,10:9:21.07:328,21,0	0/0:16,0:8:13.05:0,13,340	0/0:6,0:4:3.01:0,3,38	0/1:16,24:35:73.62:691,0,74	0/0:15,0:15:33.11:0,33,787	0/0:8,0:8:24.08:0,24,593	0/0:43,0:42:93.32:0,93,2200	0/0:24,0:24:54.17:0,54,1276	0/0:43,0:43:99:0,111,2663	0/0:24,0:24:60.21:0,60,1500	1/1:6,14:20:33.11:520,33,0	0/1:6,18:20:32.02:594,0,32	0/0:29,0:29:75.26:0,75,1849	0/0:20,0:20:51.17:0,51,1200	1/1:8,7:13:27.09:461,27,0	0/0:17,0:17:42.14:0,42,1002	1/1:7,9:14:20.35:490,20,0	0/0:17,0:17:36.11:0,36,829	0/0:35,0:35:84.29:0,84,2053	0/0:13,0:13:39.13:0,39,977	0/0:26,0:26:69.22:0,69,1677	0/0:29,0:29:75.26:0,75,1880	0/0:19,0:19:45.15:0,45,1106	0/0:27,0:27:72.25:0,72,1757	0/0:38,0:36:84.27:0,84,1624	0/0:43,0:43:99:0,105,2530	0/1:18,0:18:3.01:3,0,854
chr10	102023467	.	GTAGA	G	4359.25	PASS	AB=0.713;AC=12;AF=0.214;AN=56;BaseQRankSum=13.678;DP=670;FS=0.000;HRun=0;HaplotypeScore=136.6661;InbreedingCoeff=0.7409;MQ=53.58;MQ0=18;MQRankSum=-4.161;QD=30.06;ReadPosRankSum=1.458;VQSLOD=4.5186;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,11:18:23.22:479,0,23	1/1:2,6:6:15.05:229,15,0	0/0:14,0:3:7.58:0,8,149	0/0:9,0:2:3.01:0,3,75	1/1:4,20:20:41.95:639,42,0	0/0:25,0:25:66.21:0,66,1584	0/0:16,0:15:33.56:0,34,841	0/0:43,0:40:93.32:0,93,2244	0/0:27,0:27:72.25:0,72,1837	0/0:29,0:29:81.27:0,81,1991	0/0:22,0:21:63.20:0,63,1534	1/1:3,24:27:57.19:943,57,0	1/1:10,23:31:66.22:1092,66,0	0/0:28,0:28:78.24:0,78,1851	0/0:31,0:31:75.26:0,75,1913	1/1:5,17:21:48.16:812,48,0	0/0:21,0:21:48.16:0,48,1169	0/1:7,3:9:38.18:164,0,38	0/0:13,0:10:30.10:0,30,741	0/0:30,0:30:81.28:0,81,1988	0/0:15,0:15:33.11:0,33,830	0/0:26,0:26:63.22:0,63,1614	0/0:28,0:28:81.28:0,81,1973	0/0:19,0:19:42.14:0,42,1067	0/0:27,0:27:75.26:0,75,1787	0/0:36,0:35:98.91:0,99,2355	0/0:46,0:46:99:0,126,3031	0/0:20,0:20:49.41:0,49,1168
chr10	102023501	.	G	GTAGATAGA	2407.20	PASS	AB=1.000;AC=19;AF=0.365;AN=52;BaseQRankSum=3.896;DP=682;FS=19.298;HRun=0;HaplotypeScore=214.8763;InbreedingCoeff=0.5513;MQ=52.95;MQ0=17;MQRankSum=-3.191;QD=9.08;ReadPosRankSum=-0.826;VQSLOD=1.2962;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:24:1.60:0,2,24	0/1:5,0:7:22.92:23,0,38	./.	./.	1/1:17,0:31:2.87:19,3,0	0/0:23,0:23:36.08:0,36,703	0/0:18,0:18:27.07:0,27,515	1/1:41,0:40:3.01:38,3,0	0/0:28,0:28:51.17:0,51,1183	0/0:29,0:29:57.19:0,57,1124	0/0:23,0:23:28.76:0,29,512	0/1:15,0:19:7.74:8,0,48	0/1:12,0:26:40.35:42,0,40	0/0:22,0:22:15.05:0,15,338	0/0:30,0:30:42.13:0,42,862	0/0:13,0:28:2.08:0,2,238	0/0:23,0:23:24.05:0,24,450	1/1:11,1:11:6.53:213,7,0	1/1:10,0:14:1.43:169,1,0	1/1:14,0:36:38.94:332,39,0	1/1:5,0:11:2.99:24,3,0	0/0:20,0:20:24.05:0,24,436	0/0:31,0:30:45.14:0,45,922	0/0:25,0:24:33.11:0,33,758	0/0:26,0:26:39.12:0,39,749	1/1:23,16:39:54.14:1042,54,0	0/0:43,0:43:63.20:0,63,1269	1/1:22,0:22:32.76:670,33,0
chr10	102023692	.	G	GTAGATAGATAGA	3868.74	PASS	AB=1.000;AC=15;AF=0.288;AN=52;BaseQRankSum=0.906;DP=756;FS=14.777;HRun=0;HaplotypeScore=298.0225;InbreedingCoeff=0.8255;MQ=54.68;MQ0=6;MQRankSum=-6.878;QD=16.97;ReadPosRankSum=-2.748;VQSLOD=0.9206;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:24.07:0,24,477	0/0:14,0:14:15.94:0,16,377	./.	./.	0/0:39,0:38:18.73:0,19,380	0/0:19,0:20:36.12:0,36,1182	0/0:14,0:14:24.08:0,24,620	1/1:39,0:38:20.97:300,21,0	0/0:35,0:35:45.10:0,45,1232	0/0:42,0:42:54.18:0,54,1587	0/0:25,0:25:35.15:0,35,1080	0/0:43,0:43:36.05:0,36,754	0/0:40,0:40:50.64:0,51,1390	0/0:19,0:19:33.11:0,33,1040	0/0:38,0:38:72.25:0,72,2210	0/0:42,0:42:33.58:0,34,851	0/1:21,0:21:54.42:54,0,505	0/0:14,0:14:3.01:0,3,35	1/1:12,0:10:12.04:274,12,0	1/1:18,15:34:12.04:506,12,0	1/1:8,0:10:3.98:71,4,0	0/0:21,0:21:27.07:0,27,799	0/0:21,0:21:30.08:0,30,813	0/0:17,0:17:38.97:0,39,1282	0/0:32,0:32:51.17:0,51,1549	1/1:45,0:45:45.13:1250,45,0	1/1:17,11:30:12.04:594,12,0	1/1:33,0:33:27.09:820,27,0
chr10	102023733	.	TAGAC	T	4068.18	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=7.159;DP=702;FS=13.395;HRun=0;HaplotypeScore=146.2596;InbreedingCoeff=0.5822;MQ=68.84;MQ0=0;MQRankSum=-1.793;QD=17.61;ReadPosRankSum=-0.576;VQSLOD=2.7924;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,7:34:86.90:1028,87,0	0/1:14,0:14:99:141,0,237	0/0:19,0:18:26.59:0,27,401	0/0:10,0:10:13.28:0,13,166	1/1:16,9:24:50.70:696,51,0	0/0:17,0:17:29.27:0,29,1093	0/0:18,0:18:54.05:0,54,952	0/0:42,0:42:99:0,117,1216	0/0:26,0:26:78.10:0,78,1515	0/0:39,0:39:99:0,117,2079	0/0:21,0:21:63.07:0,63,1211	1/1:2,29:31:36.49:687,36,0	0/1:35,0:35:99:234,0,735	0/0:21,1:22:3.17:0,3,1130	0/0:38,0:38:99:0,114,2386	1/1:4,20:24:14.53:642,15,0	0/0:22,0:22:54.45:0,54,869	1/1:9,0:9:13.68:133,14,0	0/0:24,0:22:62.23:0,62,655	0/0:30,0:30:50.99:0,51,599	0/0:23,0:23:56.97:0,57,601	0/0:18,0:18:54.06:0,54,985	0/0:18,0:18:54.02:0,54,960	0/0:19,0:19:51.11:0,51,1184	0/0:33,0:32:93.13:0,93,1852	0/1:33,0:33:99:304,0,317	0/0:32,0:32:53.85:0,54,579	0/1:26,0:26:99:204,0,206
chr10	102024449	.	TG	T	828.66	PASS	AB=0.881;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.147;DP=500;FS=4.538;HRun=11;HaplotypeScore=83.3292;InbreedingCoeff=0.1195;MQ=88.07;MQ0=0;MQRankSum=-2.153;QD=3.96;ReadPosRankSum=5.861;VQSLOD=0.4157;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:2.97:0,3,20	0/1:5,0:5:15.75:16,0,17	0/0:29,0:28:61.67:0,62,542	0/1:20,1:22:7.65:8,0,277	0/0:13,0:17:14.04:0,14,129	0/1:15,3:18:25.22:25,0,167	0/1:16,4:20:56.48:56,0,255	0/0:18,0:25:20.73:0,21,175	0/0:11,0:13:7.31:0,7,38	0/1:14,1:15:6.98:7,0,93	0/0:19,0:19:23.56:0,24,219	0/0:8,0:13:8.72:0,9,54	0/0:12,0:20:8.96:0,9,76	0/1:14,3:17:22.54:23,0,181	0/0:19,0:19:36.04:0,36,356	0/0:10,0:16:17.87:0,18,151	0/0:22,3:25:26.40:0,26,451	1/1:4,16:20:15.95:337,16,0	0/0:8,0:8:2.99:0,3,23	0/0:11,0:16:11.84:0,12,90	0/0:7,0:11:8.43:0,8,61	0/1:10,2:13:10.05:10,0,67	0/1:16,5:21:16.99:17,0,237	0/0:16,2:18:5.26:0,5,197	0/1:21,5:27:23.11:23,0,217	1/1:10,13:23:35.92:295,36,0	0/0:17,0:29:21.14:0,21,163	1/1:1,6:8:23.01:178,23,0
chr10	102025138	.	C	CCT	729.25	PASS	AB=0.735;AC=2;AF=0.036;AN=56;BaseQRankSum=6.423;DP=833;FS=24.708;HRun=0;HaplotypeScore=132.7932;InbreedingCoeff=0.1018;MQ=56.67;MQ0=7;MQRankSum=1.546;QD=14.58;ReadPosRankSum=2.165;VQSLOD=2.0041;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:24.40:0,24,323	0/0:12,0:12:11.86:0,12,166	0/0:19,0:3:5.79:0,6,34	0/0:25,0:7:20.91:0,21,264	0/0:20,0:20:15.66:0,16,245	0/0:26,0:26:75.07:0,75,1169	0/0:27,0:27:81.25:0,81,1258	0/0:44,0:43:99:0,123,1843	0/0:37,0:37:99:0,108,1709	0/0:27,0:27:78.20:0,78,1111	0/0:25,0:25:72.20:0,72,1096	0/0:34,0:34:39.04:0,39,574	0/0:22,0:22:29.61:0,30,342	0/0:54,0:54:76.56:0,77,1000	0/0:42,0:42:99:0,126,1942	0/0:18,0:18:20.86:0,21,197	0/0:27,0:27:75.13:0,75,1139	0/0:16,0:16:5.99:0,6,97	0/0:23,0:21:57.19:0,57,902	0/0:36,0:36:99:0,105,1681	0/0:52,0:52:99:0,150,2336	0/0:31,0:31:87.27:0,87,1364	0/0:25,0:25:72.23:0,72,1144	0/0:25,0:25:72.23:0,72,1147	0/0:43,0:43:99:0,129,1965	0/1:16,7:31:48.86:474,0,49	0/0:29,0:28:87.28:0,87,1383	0/1:5,10:19:6.10:344,0,6
chr10	102025142	.	T	TATAC	2067.27	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=4.202;DP=825;FS=12.568;HRun=0;HaplotypeScore=151.9970;InbreedingCoeff=0.9194;MQ=55.87;MQ0=9;MQRankSum=-0.238;QD=19.88;ReadPosRankSum=2.146;VQSLOD=2.4847;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:18.87:0,19,252	0/0:12,0:12:12.91:0,13,162	0/0:20,0:4:5.21:0,5,52	./.	0/0:22,0:22:24.86:0,25,275	0/0:24,0:24:51.17:0,51,796	0/0:26,0:26:48.13:0,48,709	0/0:40,0:39:45.12:0,45,628	0/0:38,0:38:75.21:0,75,1103	0/0:24,0:24:36.12:0,36,551	0/0:25,0:25:36.09:0,36,505	0/0:34,0:34:39.93:0,40,511	0/0:22,0:22:30.10:0,30,399	1/1:21,37:58:13.82:357,14,0	0/0:41,0:42:72.22:0,72,1081	0/0:19,0:19:25.01:0,25,328	0/0:25,0:25:42.14:0,42,642	0/0:18,0:18:9.03:0,9,125	0/0:23,0:21:33.11:0,33,523	0/0:35,0:35:69.23:0,69,1073	0/0:51,0:51:81.28:0,81,1258	0/0:30,0:30:42.12:0,42,612	0/0:25,0:25:57.19:0,57,859	0/0:25,0:25:56.66:0,57,822	0/0:44,0:44:87.27:0,87,1306	1/1:19,1:27:57.14:1070,57,0	0/0:28,0:27:69.23:0,69,1041	1/1:9,0:19:36.12:779,36,0
chr10	102025373	.	GTATACACAGATACACA	G	1821.60	PASS	AB=0.563;AC=3;AF=0.054;AN=56;BaseQRankSum=6.561;DP=737;FS=0.819;HRun=0;HaplotypeScore=307.2908;InbreedingCoeff=0.4702;MQ=60.33;MQ0=1;MQRankSum=-3.990;QD=42.36;ReadPosRankSum=-0.247;VQSLOD=2.5554;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:6.02:0,6,87	0/0:6,0:6:9.03:0,9,130	0/0:23,0:12:14.21:0,14,539	0/0:18,0:14:26.87:0,27,819	0/0:22,0:22:11.93:0,12,184	0/0:30,0:30:84.26:0,84,5399	0/0:21,0:21:57.14:0,57,2657	0/0:37,0:37:93.25:0,93,3395	0/0:23,0:23:60.19:0,60,4149	0/0:46,0:46:99:0,129,8148	0/0:23,0:23:54.14:0,54,3028	0/0:23,0:23:21.54:0,22,311	0/0:29,0:29:36.59:0,37,517	0/0:40,0:40:99:0,99,6154	0/0:47,0:47:99:0,116,8428	0/0:27,0:27:31.84:0,32,512	0/0:22,0:22:60.16:0,60,3443	0/0:11,0:11:1.92:0,2,17	0/0:23,0:23:57.13:0,57,2174	0/0:29,0:29:63.19:0,63,3901	0/0:28,0:28:84.21:0,84,4547	0/0:35,0:35:87.23:0,87,4648	0/0:22,0:22:57.14:0,57,3150	0/0:15,0:15:33.08:0,33,1847	0/0:41,0:40:96.28:0,96,5771	0/1:6,21:26:99:1372,0,532	0/0:26,0:26:72.07:0,72,3896	1/1:0,16:16:12.04:549,12,0
chr10	102025374	.	TATACACAG	T	4237.66	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=12.385;DP=731;FS=0.488;HRun=0;HaplotypeScore=195.3185;InbreedingCoeff=0.8555;MQ=60.29;MQ0=2;MQRankSum=-10.708;QD=23.16;ReadPosRankSum=3.204;VQSLOD=3.8955;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,21:26:6.02:163,6,0	1/1:0,6:6:9.03:245,9,0	0/0:24,0:12:14.48:0,14,244	0/0:17,0:14:25.09:0,25,352	1/1:0,21:21:12.04:282,12,0	0/0:29,0:29:84.21:0,84,2959	0/0:21,0:21:57.13:0,57,1569	0/0:38,0:38:96.22:0,96,2033	0/0:23,0:23:60.18:0,60,2280	0/0:47,0:46:99:0,129,4533	0/0:22,0:22:54.12:0,54,1707	1/1:5,17:22:20.63:562,21,0	1/1:2,26:28:35.78:979,36,0	0/0:38,0:38:99:0,99,3517	0/0:46,0:46:99:0,116,4803	1/1:1,26:27:39:1053,39,0	0/0:22,0:22:60.09:0,60,1960	1/1:0,11:11:6.02:142,6,0	0/0:23,0:23:57.11:0,57,1219	0/0:29,0:29:66.19:0,66,2265	0/0:28,0:28:84.19:0,84,2573	0/0:34,0:34:87.18:0,87,2608	0/0:22,0:22:57.13:0,57,1816	0/0:16,0:16:36.07:0,36,1125	0/0:41,0:40:96.25:0,96,3299	0/1:26,0:26:99:573,0,237	0/0:26,0:26:72.02:0,72,2192	1/1:16,0:16:12.04:240,12,0
chr10	102025566	.	A	AC	7787.29	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-6.660;DP=782;FS=4.669;HRun=1;HaplotypeScore=83.9702;InbreedingCoeff=0.9992;MQ=86.42;MQ0=0;MQRankSum=-5.012;QD=39.53;ReadPosRankSum=2.515;VQSLOD=5.5712;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,50:51:99:1933,129,0	1/1:1,9:10:23.75:358,24,0	0/0:29,0:29:81.22:0,81,1015	0/0:38,0:38:99:0,109,1331	1/1:0,22:22:57.19:845,57,0	0/0:23,0:23:66.21:0,66,856	0/0:35,0:35:99:0,102,1280	0/0:31,0:31:87.27:0,87,1117	0/0:24,0:24:69.22:0,69,895	0/0:32,0:32:90.29:0,90,1164	0/0:22,0:22:57.18:0,57,728	1/1:0,27:27:81.27:1209,81,0	1/1:0,32:32:84.28:1257,84,0	0/0:32,0:32:96.31:0,96,1245	0/0:28,0:28:84.27:0,84,1090	1/1:0,23:23:60.20:890,60,0	0/0:35,0:35:99:0,102,1304	0/0:25,0:25:69.22:0,69,888	0/0:26,0:25:78.25:0,78,998	0/0:24,0:24:72.23:0,72,931	0/0:43,0:43:99:0,123,1597	0/0:24,0:24:72.23:0,72,933	0/0:26,0:26:72.23:0,72,932	0/0:36,0:36:93.29:0,93,1192	0/0:27,0:27:75.24:0,75,973	1/1:2,22:24:30.26:936,30,0	0/0:24,0:24:72.23:0,72,928	1/1:0,8:8:24.08:359,24,0
chr10	102026168	.	TCA	T	299.67	PASS	AB=0.792;AC=4;AF=0.071;AN=56;BaseQRankSum=3.914;DP=438;FS=15.050;HRun=0;HaplotypeScore=70.4106;InbreedingCoeff=0.3511;MQ=65.26;MQ0=6;MQRankSum=-0.050;QD=6.12;ReadPosRankSum=-0.077;VQSLOD=1.5573;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:21.07:0,21,325	0/0:6,0:6:11.48:0,11,150	0/0:36,0:24:37.01:0,37,650	0/0:30,0:20:42.14:0,42,632	0/0:16,0:16:15.58:0,16,346	0/0:16,0:16:14.64:0,15,194	0/0:18,0:18:39.04:0,39,505	0/0:18,0:18:36.11:0,36,520	0/0:7,0:7:11.95:0,12,157	0/0:17,0:17:32.98:0,33,460	0/0:13,0:13:33.04:0,33,481	0/0:19,0:19:22.50:0,22,261	0/0:13,0:13:26.52:0,27,322	0/0:6,0:6:3.01:0,3,46	0/0:9,0:9:14.98:0,15,202	0/0:15,0:15:21.07:0,21,325	0/0:26,0:25:9.97:0,10,453	0/1:26,0:26:11.01:11,0,716	0/0:6,0:6:18.03:0,18,243	0/0:15,0:15:30.07:0,30,374	0/0:19,0:19:36.10:0,36,497	0/0:8,0:8:11.95:0,12,147	0/0:10,0:10:15.03:0,15,208	0/0:21,0:21:35.45:0,35,401	0/0:15,0:15:23.84:0,24,261	0/1:4,10:14:57.27:247,0,57	0/0:11,0:11:27.09:0,27,416	1/1:3,6:8:12.04:149,12,0
chr10	102026181	.	TAC	T	814.88	PASS	AB=0.947;AC=35;AF=0.673;AN=52;BaseQRankSum=0.997;DP=479;FS=4.008;HRun=0;HaplotypeScore=78.8648;InbreedingCoeff=0.2334;MQ=54.90;MQ0=15;MQRankSum=1.626;QD=2.46;ReadPosRankSum=1.572;VQSLOD=1.3483;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:2.57:0,3,23	1/1:5,0:6:2.84:14,3,0	./.	./.	0/1:16,0:20:20.05:20,0,34	1/1:9,8:17:3:29,3,0	1/1:20,1:20:6.15:64,6,0	0/0:16,0:16:2.92:0,3,17	1/1:10,1:10:5.75:44,6,0	0/1:13,0:12:6.79:7,0,37	0/1:18,0:18:22.89:53,0,23	1/1:8,0:20:8.91:42,9,0	0/1:12,0:13:8.12:8,0,17	0/1:18,0:17:2.62:53,0,3	1/1:8,3:10:3.01:32,3,0	0/0:13,0:12:2.19:0,2,5	1/1:27,3:29:24.74:187,25,0	0/0:25,0:25:9.01:0,9,94	1/1:10,0:9:6.89:25,7,0	1/1:19,0:20:7.85:30,8,0	1/1:20,0:19:2.04:7,2,0	1/1:5,5:10:3.48:34,3,0	1/1:6,5:12:2.84:14,3,0	1/1:11,21:32:14.83:143,15,0	1/1:4,13:17:12.03:129,12,0	0/0:14,0:14:8.37:0,8,49	0/0:11,0:10:3.46:0,3,24	1/1:8,0:8:1.66:29,2,0
chr10	102026429	.	C	CT	661.29	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.201;DP=658;FS=6.271;HRun=1;HaplotypeScore=64.4682;InbreedingCoeff=0.9379;MQ=88.99;MQ0=0;MQRankSum=-0.137;QD=33.06;ReadPosRankSum=-0.551;VQSLOD=2.8448;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,135,1735	0/0:13,0:13:39.13:0,39,506	0/0:19,0:19:54.13:0,54,673	0/0:30,0:30:78.06:0,78,918	0/0:28,0:28:78.23:0,78,990	0/0:30,0:29:81.23:0,81,1022	0/0:24,0:24:63.20:0,63,816	0/0:24,0:24:72.22:0,72,918	0/0:28,0:28:84.25:0,84,1062	0/0:25,0:25:75.24:0,75,963	0/0:19,0:19:51.17:0,51,662	0/0:23,0:23:63.20:0,63,814	0/0:26,0:26:78.25:0,78,1012	0/0:19,0:19:54.18:0,54,701	0/0:25,0:25:69.22:0,69,896	0/0:27,0:27:81.25:0,81,1038	0/0:27,0:27:81.21:0,81,1017	0/0:24,0:24:66.21:0,66,857	0/0:17,0:17:42.14:0,42,545	0/0:26,0:26:78.24:0,78,997	0/0:15,0:15:45.11:0,45,566	0/0:28,0:28:78.24:0,78,999	0/0:16,0:16:48.16:0,48,623	0/0:21,0:21:60.19:0,60,778	0/0:25,0:25:63.20:0,63,818	1/1:1,16:17:9.19:632,9,0	0/0:30,0:29:87.28:0,87,1129	1/1:0,3:3:9.03:135,9,0
chr10	102026721	.	CCGT	C	1065.96	PASS	AB=0.525;AC=3;AF=0.054;AN=56;BaseQRankSum=7.969;DP=708;FS=12.277;HRun=0;HaplotypeScore=97.0113;InbreedingCoeff=0.6406;MQ=88.36;MQ0=0;MQRankSum=-3.193;QD=36.76;ReadPosRankSum=1.956;VQSLOD=4.1523;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,2933	0/0:14,0:14:42.14:0,42,991	0/0:33,0:33:90.18:0,90,1968	0/0:17,0:17:45.15:0,45,1018	0/0:40,0:40:99:0,117,2760	0/0:19,0:19:57.01:0,57,1104	0/0:24,0:24:69.24:0,69,1603	0/0:28,0:28:81.27:0,81,1850	0/0:25,0:25:75.23:0,75,1668	0/0:30,0:30:90.30:0,90,2080	0/0:21,0:21:60.19:0,60,1349	0/0:25,0:25:75.26:0,75,1722	0/0:28,0:28:78.25:0,78,1685	0/0:28,0:28:84.25:0,84,1923	0/0:27,0:27:81.28:0,81,1888	0/0:27,0:27:81.26:0,81,1822	0/0:24,0:24:72.23:0,72,1654	0/0:19,0:19:54.19:0,54,1242	0/0:22,0:22:66.18:0,66,1443	0/0:36,0:35:99:0,105,2461	0/0:23,0:23:69.17:0,69,1507	0/0:25,0:25:69.22:0,69,1583	0/0:23,0:23:69.21:0,69,1469	0/0:20,0:20:60.21:0,60,1386	0/0:18,0:18:48.15:0,48,1087	0/1:2,19:21:81.64:852,0,82	0/0:39,0:39:99:0,111,2600	1/1:1,7:8:18.06:317,18,0
chr10	102027181	.	C	CGT	4604.20	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-6.551;DP=432;FS=1.031;HRun=0;HaplotypeScore=67.7344;InbreedingCoeff=0.9542;MQ=94.09;MQ0=0;MQRankSum=-3.127;QD=41.11;ReadPosRankSum=3.639;VQSLOD=6.9144;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:21:48.16:898,48,0	1/1:0,2:2:6.02:112,6,0	0/0:25,0:25:72.21:0,72,1015	0/0:23,0:23:56.97:0,57,770	1/1:4,27:31:60.68:1124,61,0	0/0:5,0:5:12.04:0,12,176	0/0:20,0:20:57.17:0,57,813	0/0:11,0:11:27.09:0,27,394	0/0:10,0:10:27.09:0,27,397	0/0:16,0:16:45.14:0,45,645	0/0:19,0:19:42.14:0,42,618	1/1:2,18:20:42.14:767,42,0	1/1:2,17:19:45.11:805,45,0	0/0:11,0:11:18.06:0,18,264	0/0:13,0:13:33.11:0,33,485	1/1:1,11:12:33.11:617,33,0	0/0:24,0:24:69.23:0,69,1013	1/1:0,6:6:15.05:281,15,0	0/0:5,0:5:12.04:0,12,175	0/0:24,0:24:60.20:0,60,880	0/0:16,0:16:42.12:0,42,598	0/0:17,0:17:45.14:0,45,642	0/0:16,0:16:36.12:0,36,518	0/0:19,0:19:57.19:0,57,833	0/0:12,0:12:30.10:0,30,441	0/0:13,0:13:39.13:0,39,574	0/0:18,0:18:48.16:0,48,705	0/0:3,0:3:9.03:0,9,132
chr10	102029395	.	A	AT	1935.93	PASS	AB=0.625;AC=13;AF=0.232;AN=56;BaseQRankSum=-6.341;DP=498;FS=2.987;HRun=10;HaplotypeScore=56.8501;InbreedingCoeff=0.8414;MQ=71.82;MQ0=0;MQRankSum=-1.197;QD=15.36;ReadPosRankSum=-0.169;VQSLOD=3.7741;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,18:27:33.55:352,34,0	1/1:3,8:11:15.04:159,15,0	0/0:11,0:9:14.81:0,15,121	0/0:15,0:14:14.10:0,14,112	1/1:5,25:31:35.26:536,35,0	0/0:27,0:28:20.83:0,21,435	0/0:18,2:20:15.61:0,16,323	0/0:20,0:20:38.93:0,39,320	0/0:13,0:13:35.96:0,36,295	0/0:20,0:20:43.16:0,43,344	0/0:17,1:18:6.39:0,6,263	1/1:3,8:11:12.03:128,12,0	1/1:2,11:13:30.08:320,30,0	0/0:19,0:19:50.92:0,51,418	0/0:17,0:17:41.94:0,42,345	0/1:6,9:14:15.54:254,0,16	0/0:35,0:35:95.86:0,96,787	1/1:2,15:18:17.29:373,17,0	0/0:18,0:18:35.59:0,36,270	0/0:6,0:6:8.97:0,9,74	0/0:12,0:12:28.64:0,29,206	0/0:20,0:20:53.88:0,54,440	0/0:22,0:22:41.85:0,42,345	0/0:19,0:19:50.93:0,51,419	0/0:19,0:19:48.94:0,49,384	0/0:3,0:17:27.24:0,27,95	0/0:16,0:16:41.92:0,42,340	0/0:0,0:6:8.15:0,8,24
chr10	102032436	.	GA	G	3457.12	PASS	AB=0.950;AC=15;AF=0.268;AN=56;BaseQRankSum=10.133;DP=646;FS=8.491;HRun=10;HaplotypeScore=66.4176;InbreedingCoeff=0.9230;MQ=80.63;MQ0=0;MQRankSum=0.908;QD=18.20;ReadPosRankSum=3.042;VQSLOD=4.2009;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,30:35:51.81:692,52,0	1/1:0,6:6:15:130,15,0	0/1:18,1:18:5.93:6,0,165	0/0:18,0:17:23.05:0,23,222	1/1:2,27:30:79.97:675,80,0	0/0:19,1:21:24.92:0,25,486	0/0:17,0:17:45.12:0,45,498	0/0:30,1:31:58.09:0,58,827	0/0:17,0:17:45.11:0,45,487	0/0:24,1:27:45.80:0,46,694	0/0:19,1:20:31.10:0,31,566	1/1:2,26:28:71.98:625,72,0	1/1:2,19:21:47.99:417,48,0	0/0:24,0:24:63:0,63,678	0/0:21,1:22:31.99:0,32,573	1/1:5,16:21:38.98:339,39,0	0/0:29,0:29:78.20:0,78,854	1/1:8,22:30:65.97:573,66,0	0/0:26,0:26:63.13:0,63,671	0/0:29,0:29:81.17:0,81,864	0/0:25,0:25:60.16:0,60,664	0/0:18,0:18:39.11:0,39,431	0/0:17,0:17:45.07:0,45,477	0/0:18,0:18:48.11:0,48,520	0/0:30,0:33:86.90:0,87,924	0/0:4,0:22:57.44:0,57,338	0/0:26,0:26:75.20:0,75,830	0/0:3,0:16:40.55:0,41,221
chr10	102032673	.	GT	G	945.55	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.154;DP=713;FS=2.850;HRun=9;HaplotypeScore=71.7436;InbreedingCoeff=0.9122;MQ=81.58;MQ0=0;MQRankSum=-0.518;QD=22.51;ReadPosRankSum=1.346;VQSLOD=4.6700;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,111,1263	0/0:14,0:14:36.11:0,36,414	0/0:23,0:23:53.78:0,54,567	0/0:13,1:14:2.82:0,3,278	0/0:28,0:28:81.20:0,81,899	0/0:35,0:35:93.28:0,93,1073	0/0:37,0:37:99:0,108,1246	0/0:36,0:38:72.08:0,72,811	0/0:20,0:21:63.02:0,63,707	0/0:28,0:28:69.21:0,69,796	0/0:15,0:14:45.13:0,45,519	0/0:25,0:25:69.20:0,69,788	0/0:25,0:25:72.21:0,72,830	0/0:40,0:41:99:0,111,1220	0/0:21,0:21:54.11:0,54,598	0/0:30,0:30:78.19:0,78,872	0/0:22,0:22:60.12:0,60,666	0/0:10,0:25:43.01:0,43,236	0/0:11,0:11:21.06:0,21,242	0/0:33,0:33:75.08:0,75,824	0/0:23,0:23:66.18:0,66,750	0/0:15,0:15:36.10:0,36,407	0/0:12,0:12:33.10:0,33,380	0/0:29,0:31:84.07:0,84,940	0/0:27,0:27:81.23:0,81,927	1/1:1,29:30:84.03:765,84,0	0/0:35,0:35:99:0,99,1126	1/1:1,11:12:33.02:302,33,0
chr10	102033186	.	CCT	C	2167.75	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.884;DP=750;FS=3.830;HRun=0;HaplotypeScore=88.2972;InbreedingCoeff=0.9985;MQ=78.33;MQ0=0;MQRankSum=-1.647;QD=31.88;ReadPosRankSum=2.351;VQSLOD=5.9859;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,147,2432	0/0:8,0:8:21.07:0,21,360	0/0:24,0:24:52.39:0,52,780	0/0:26,0:25:63.67:0,64,1004	0/0:31,0:31:90.31:0,90,1528	0/0:21,0:21:60.19:0,60,1003	0/0:15,0:15:45.13:0,45,719	0/0:38,0:38:93.30:0,93,1519	0/0:27,0:27:78.24:0,78,1274	0/0:30,0:30:75.26:0,75,1287	0/0:21,0:21:54.18:0,54,923	0/0:28,0:28:78.24:0,78,1280	0/0:35,0:35:93.29:0,93,1542	0/0:33,0:33:96.33:0,96,1637	0/0:29,0:29:81.24:0,81,1310	0/0:21,0:21:63.22:0,63,1080	0/0:20,0:20:54.18:0,54,919	1/1:1,18:19:48.16:631,48,0	0/0:23,0:23:60.20:0,60,1004	0/0:22,0:22:66.21:0,66,1091	0/0:44,0:44:99:0,117,1999	0/0:22,0:22:63.18:0,63,1026	0/0:20,0:20:57.16:0,57,923	0/0:37,0:37:99:0,102,1749	0/0:26,0:26:75.24:0,75,1259	1/1:3,26:29:75.23:970,75,0	0/0:27,0:27:72.19:0,72,1151	1/1:3,17:20:54.18:710,54,0
chr10	102033334	.	GTGTTACAA	G	1526.81	PASS	AB=0.541;AC=3;AF=0.054;AN=56;BaseQRankSum=7.365;DP=715;FS=10.782;HRun=0;HaplotypeScore=177.8737;InbreedingCoeff=0.6336;MQ=73.84;MQ0=0;MQRankSum=-5.777;QD=56.55;ReadPosRankSum=-0.927;VQSLOD=2.6000;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,4753	0/0:15,0:15:45.14:0,45,1708	0/0:31,0:30:90.25:0,90,3349	0/0:17,0:16:39.13:0,39,1588	0/0:29,0:29:87.30:0,87,3818	0/0:26,0:25:75.26:0,75,3179	0/0:16,0:16:48.15:0,48,1770	0/0:34,0:34:99:0,99,4080	0/0:25,0:25:75.26:0,75,3131	0/0:38,0:38:99:0,108,4537	0/0:19,0:19:57.19:0,57,2359	0/0:31,0:31:93.31:0,93,3811	0/0:33,0:33:96.32:0,96,3947	0/0:32,0:32:90.31:0,90,3823	0/0:35,0:35:93.30:0,93,3786	0/0:25,0:25:75.26:0,75,3318	0/0:17,0:17:48.15:0,48,1986	0/0:17,0:17:48.16:0,48,2054	0/0:20,0:20:60.20:0,60,2403	0/0:32,0:32:90.31:0,90,3870	0/0:30,0:30:90.30:0,90,3825	0/0:29,0:29:78.26:0,78,3312	0/0:24,0:24:72.24:0,72,2925	0/0:28,0:28:81.22:0,81,3194	0/0:22,0:22:66.23:0,66,2881	0/1:3,17:20:80.13:1213,0,80	0/0:24,0:24:69.19:0,69,2849	1/1:2,5:7:15.05:416,15,0
chr10	102035356	.	AT	A	1591.31	PASS	AB=0.944;AC=19;AF=0.339;AN=56;BaseQRankSum=0.152;DP=530;FS=2.295;HRun=13;HaplotypeScore=76.5149;InbreedingCoeff=0.8918;MQ=70.11;MQ0=2;MQRankSum=-0.014;QD=8.12;ReadPosRankSum=-0.763;VQSLOD=2.7382;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:36.54:0,37,167	0/0:8,0:8:16.07:0,16,66	0/0:27,0:16:18.05:0,18,128	0/0:32,0:13:11.86:0,12,83	0/0:27,0:27:39.39:0,39,188	1/1:7,12:19:12.26:240,12,0	0/0:14,0:15:35.89:0,36,335	1/1:9,12:23:34.76:242,35,0	0/0:14,1:15:14.59:0,15,289	0/0:22,0:22:5.76:0,6,330	0/0:28,0:28:60.05:0,60,570	0/0:15,0:15:23.77:0,24,109	0/0:21,0:21:42.85:0,43,176	0/0:10,0:10:21.03:0,21,201	0/1:15,1:17:2.54:3,0,213	0/0:15,0:16:35.36:0,35,162	0/0:24,0:24:56.11:0,56,506	1/1:2,0:8:12.21:35,12,0	1/1:4,12:25:27.91:286,28,0	1/1:7,19:27:34.51:397,35,0	1/1:2,5:8:16.94:115,17,0	0/0:8,0:8:17.96:0,18,161	0/0:13,0:13:27.02:0,27,252	0/0:10,0:10:17.80:0,18,145	0/0:20,3:23:7.18:0,7,373	1/1:8,0:29:46.38:134,46,0	1/1:6,18:24:15.52:277,16,0	1/1:4,0:15:24.43:71,24,0
chr10	102035359	.	T	TA	3014.02	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-9.994;DP=518;FS=1.970;HRun=0;HaplotypeScore=71.7802;InbreedingCoeff=0.9860;MQ=71.32;MQ0=2;MQRankSum=0.328;QD=28.98;ReadPosRankSum=3.648;VQSLOD=3.7318;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:54.17:681,54,0	1/1:0,8:8:18.05:232,18,0	0/0:26,0:14:15.58:0,16,201	0/0:29,0:11:12.28:0,12,68	1/1:1,24:25:71.35:823,71,0	0/0:16,0:16:47.68:0,48,398	0/0:14,0:14:39.11:0,39,511	0/0:23,0:23:52.98:0,53,419	0/0:14,0:14:42.07:0,42,488	0/0:22,0:22:65.12:0,65,736	0/0:27,0:27:80.88:0,81,991	1/1:1,15:16:35.94:426,36,0	1/1:0,21:21:48.16:621,48,0	0/0:9,0:9:27.07:0,27,331	0/0:18,0:18:47.69:0,48,498	1/1:2,13:15:27.93:419,28,0	0/0:25,0:25:68.51:0,69,833	0/0:8,0:7:23.86:0,24,175	0/0:25,0:25:72.93:0,73,570	0/0:27,0:27:78.79:0,79,611	0/0:9,0:9:26.95:0,27,218	0/0:6,0:6:18.06:0,18,242	0/0:13,0:13:39.09:0,39,465	0/0:9,0:9:20.57:0,21,217	0/0:24,0:24:64.63:0,65,731	0/0:27,2:29:54.92:0,55,603	0/0:25,0:25:65.61:0,66,540	0/0:16,0:15:44.79:0,45,340
chr10	102037274	.	CTT	C	304.75	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.076;DP=672;FS=9.549;HRun=2;HaplotypeScore=102.2661;InbreedingCoeff=0.8833;MQ=77.20;MQ0=3;MQRankSum=0.038;QD=14.51;ReadPosRankSum=-2.880;VQSLOD=-0.6578;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:47.75:0,48,393	0/0:4,0:4:11.98:0,12,99	0/0:38,0:28:74.24:0,74,1157	0/0:62,0:49:59.37:0,59,1296	0/0:14,0:14:38.12:0,38,312	0/0:23,0:23:69.24:0,69,1237	0/0:28,0:28:81.27:0,81,1464	0/0:29,0:29:87.26:0,87,1529	0/0:14,0:14:42.14:0,42,763	0/0:20,0:20:60.21:0,60,1080	0/0:34,0:34:99:0,102,1855	0/0:26,0:26:65.27:0,65,540	0/0:29,0:29:75.83:0,76,653	0/0:20,0:20:57.20:0,57,1020	0/0:35,0:35:99:0,104,1821	0/0:14,0:15:42.54:0,43,342	0/0:31,0:31:93.32:0,93,1651	0/0:3,0:14:20.20:0,20,152	0/0:29,0:29:61.09:0,61,1387	0/0:17,0:17:51.17:0,51,908	0/0:37,0:37:99:0,108,1934	0/0:15,0:15:45.15:0,45,784	0/0:17,0:17:48.16:0,48,839	0/0:34,0:34:96.27:0,96,1660	0/0:22,0:22:66.23:0,66,1186	1/1:0,13:13:24.07:364,24,0	0/0:22,0:22:66.23:0,66,1188	1/1:0,8:8:3.01:49,3,0
chr10	102039464	.	A	AG	528.33	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.226;DP=705;FS=5.453;HRun=1;HaplotypeScore=70.3951;InbreedingCoeff=0.9956;MQ=90.83;MQ0=0;MQRankSum=-3.214;QD=37.74;ReadPosRankSum=1.023;VQSLOD=4.1679;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.24:0,75,973	0/0:13,0:13:36.12:0,36,467	0/0:35,0:35:93.28:0,93,1170	0/0:20,0:20:54.17:0,54,680	0/0:29,0:29:87.28:0,87,1128	0/0:30,0:30:87.28:0,87,1129	0/0:28,0:28:84.27:0,84,1091	0/0:43,0:43:99:0,126,1583	0/0:17,0:17:51.15:0,51,648	0/0:36,0:36:99:0,102,1303	0/0:30,0:30:87.28:0,87,1117	0/0:34,0:34:99:0,102,1295	0/0:33,0:33:93.27:0,93,1174	0/0:23,0:23:69.21:0,69,881	0/0:27,0:27:81.26:0,81,1051	0/0:36,0:36:99:0,105,1363	0/0:12,0:12:36.12:0,36,466	1/1:1,13:14:42.14:623,42,0	0/0:16,0:16:45.13:0,45,569	0/0:25,0:25:69.22:0,69,895	0/0:22,0:22:63.16:0,63,770	0/0:25,0:25:72.23:0,72,932	0/0:27,0:27:78.24:0,78,996	0/0:14,0:14:39.13:0,39,506	0/0:21,0:21:63.20:0,63,818	0/0:21,0:21:63.19:0,63,792	0/0:41,0:41:99:0,120,1527	0/0:7,0:7:21.07:0,21,273
chr10	102040014	.	GA	G	3115.45	PASS	AB=0.933;AC=19;AF=0.339;AN=56;BaseQRankSum=12.086;DP=563;FS=1.634;HRun=10;HaplotypeScore=56.4785;InbreedingCoeff=0.9520;MQ=65.18;MQ0=0;MQRankSum=-1.388;QD=17.02;ReadPosRankSum=1.903;VQSLOD=4.2359;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:18:38.98:339,39,0	1/1:0,11:11:29.99:260,30,0	0/1:13,1:13:0.70:1,0,209	0/0:11,1:12:30.08:0,30,329	1/1:5,26:31:74.96:651,75,0	0/0:17,0:18:47.96:0,48,512	0/0:21,0:21:57.13:0,57,613	0/0:25,1:26:40.12:0,40,664	0/0:15,0:15:39.06:0,39,411	0/0:24,1:25:37.11:0,37,638	0/0:23,0:23:63.17:0,63,697	1/1:2,16:18:44.99:391,45,0	1/1:5,18:23:14.81:358,15,0	0/0:15,0:15:42.11:0,42,464	0/0:21,0:21:57.13:0,57,620	1/1:2,18:21:48.58:400,49,0	0/0:33,0:33:96.26:0,96,1062	1/1:3,12:15:35.99:313,36,0	0/0:28,1:30:43.92:0,44,715	0/0:26,0:26:72.17:0,72,780	0/0:13,0:13:36.08:0,36,389	0/0:23,0:23:60.16:0,60,664	0/0:32,0:32:84.21:0,84,920	0/0:13,0:13:33.09:0,33,365	0/0:14,0:14:33.09:0,33,365	1/1:2,20:22:26.79:459,27,0	0/0:20,0:20:48.13:0,48,530	1/1:1,9:10:17.99:156,18,0
chr10	102040705	.	T	TTTTG	958.33	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.668;DP=702;FS=2.046;HRun=0;HaplotypeScore=111.0580;InbreedingCoeff=0.9928;MQ=68.22;MQ0=2;MQRankSum=-2.922;QD=39.93;ReadPosRankSum=0.161;VQSLOD=3.4036;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:67.74:0,68,1416	0/0:12,0:12:36.11:0,36,645	0/0:20,0:16:26.83:0,27,567	0/0:39,0:28:35.01:0,35,736	0/0:37,0:37:99:0,108,1920	0/0:28,0:28:81.26:0,81,1457	0/0:14,0:14:42.14:0,42,786	0/0:38,0:38:99:0,102,1784	0/0:23,0:23:66.21:0,66,1204	0/0:28,0:28:78.27:0,78,1446	0/0:24,0:24:72.23:0,72,1263	0/0:22,0:22:66.17:0,66,1123	0/0:11,0:11:33.09:0,33,549	0/0:22,0:22:63.19:0,63,1059	0/0:26,0:26:75.25:0,75,1344	0/0:13,0:13:39.13:0,39,715	0/0:42,0:41:99:0,120,2068	1/1:6,17:24:20.30:1050,20,0	0/0:24,0:24:63.15:0,63,1100	0/0:45,0:45:99:0,123,2028	0/0:12,0:12:36.11:0,36,634	0/0:29,0:29:81.27:0,81,1474	0/0:16,0:16:45.14:0,45,810	0/0:16,0:16:48.15:0,48,851	0/0:36,0:36:99:0,105,1911	0/0:31,0:31:90.30:0,90,1651	0/0:30,0:30:81.27:0,81,1432	0/0:10,0:10:30.10:0,30,552
chr10	102041519	.	T	TC	857.94	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.786;DP=650;FS=2.506;HRun=6;HaplotypeScore=68.7824;InbreedingCoeff=0.9639;MQ=80.14;MQ0=0;MQRankSum=-2.094;QD=26.81;ReadPosRankSum=0.414;VQSLOD=4.1450;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,108,1094	0/0:9,0:9:18.01:0,18,175	0/0:23,0:23:53.55:0,54,499	0/0:23,0:22:36.17:0,36,433	0/0:33,0:33:78.15:0,78,787	0/0:22,0:22:63.14:0,63,642	0/0:24,0:24:63.14:0,63,643	0/0:30,0:30:69.14:0,69,694	0/0:16,0:16:45.10:0,45,459	0/0:32,0:32:84.18:0,84,853	0/0:18,0:18:48.09:0,48,483	0/0:21,0:21:48.10:0,48,489	0/0:19,0:19:47.59:0,48,467	0/0:16,0:16:36.07:0,36,366	0/0:26,0:26:72.16:0,72,734	0/0:24,0:24:72.16:0,72,734	0/0:38,0:38:99:0,111,1115	0/0:33,0:33:90.16:0,90,907	0/0:21,0:21:54.09:0,54,541	0/0:18,0:18:48.11:0,48,489	0/0:26,0:26:66.13:0,66,665	0/0:26,0:26:72.16:0,72,733	0/0:12,0:12:33.06:0,33,332	0/0:23,0:23:54.12:0,54,550	0/0:14,0:14:39.08:0,39,396	1/1:4,24:28:44.60:859,45,0	0/0:26,0:26:75.17:0,75,764	1/1:0,4:4:8.89:113,9,0
chr10	102042492	.	A	ATG	2201.98	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.683;DP=650;FS=8.912;HRun=0;HaplotypeScore=75.1100;InbreedingCoeff=0.9530;MQ=70.25;MQ0=1;MQRankSum=0.367;QD=39.32;ReadPosRankSum=2.257;VQSLOD=5.4279;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:39.11:0,39,486	0/0:9,0:9:24.08:0,24,309	0/0:21,0:14:20.48:0,20,255	0/0:12,0:11:6.50:0,7,39	0/0:26,0:26:69.21:0,69,871	0/0:32,0:32:81.22:0,81,1023	0/0:29,0:29:72.22:0,72,912	0/0:31,0:31:78.20:0,78,962	0/0:22,0:22:63.19:0,63,796	0/0:20,0:20:57.19:0,57,733	0/0:23,0:23:60.18:0,60,750	0/0:33,0:33:93.26:0,93,1155	0/0:35,0:35:93.28:0,93,1180	0/0:21,0:21:60.18:0,60,757	0/0:26,0:26:72.21:0,72,898	0/0:23,0:23:63.17:0,63,780	0/0:16,0:16:48.16:0,48,616	1/1:3,5:8:12.04:202,12,0	0/0:26,0:26:54.17:0,54,692	0/0:34,0:34:96.26:0,96,1202	0/0:22,0:22:57.18:0,57,731	0/0:24,0:24:63.19:0,63,797	0/0:26,0:26:69.22:0,69,882	0/0:16,0:16:45.10:0,45,560	0/0:21,0:21:60.11:0,60,721	1/1:4,34:38:66.75:1683,67,0	0/0:29,0:29:69.22:0,69,887	1/1:0,10:10:27.09:456,27,0
chr10	102044003	.	G	GATTAT	3216.43	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.343;DP=606;FS=8.959;HRun=0;HaplotypeScore=124.5145;InbreedingCoeff=0.9957;MQ=75.99;MQ0=0;MQRankSum=-7.998;QD=80.41;ReadPosRankSum=-0.027;VQSLOD=5.2940;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,2224	0/0:9,0:9:27.09:0,27,534	0/0:11,0:10:27.08:0,27,528	0/0:21,0:20:47.70:0,48,892	0/0:22,0:22:66.23:0,66,1386	0/0:13,0:13:39.13:0,39,798	0/0:15,0:15:45.14:0,45,906	0/0:25,0:25:69.22:0,69,1389	0/0:18,0:18:54.19:0,54,1121	0/0:39,0:39:99:0,108,2229	0/0:19,0:19:51.16:0,51,1034	0/0:22,0:22:66.23:0,66,1370	0/0:37,0:37:99:0,105,2163	0/0:23,0:23:63.19:0,63,1270	0/0:27,0:27:78.25:0,78,1585	0/0:23,0:23:66.23:0,66,1355	0/0:24,0:24:72.25:0,72,1496	0/0:13,0:13:39.13:0,39,819	0/0:20,0:20:48.15:0,48,944	0/0:25,0:25:75.26:0,75,1575	0/0:17,0:17:51.18:0,51,1070	0/0:17,0:17:45.15:0,45,945	0/0:26,0:26:75.26:0,75,1573	0/0:8,0:8:24.08:0,24,503	0/0:27,0:27:75.24:0,75,1537	1/1:6,27:33:90.31:2688,90,0	0/0:27,0:27:81.28:0,81,1700	1/1:2,5:7:21.07:650,21,0
chr10	102044041	.	G	GA	307.97	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-0.889;DP=592;FS=3.978;HRun=9;HaplotypeScore=69.7899;InbreedingCoeff=0.5642;MQ=77.64;MQ0=1;MQRankSum=-1.467;QD=7.70;ReadPosRankSum=-0.308;VQSLOD=1.6136;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:60.89:0,61,750	0/0:7,0:7:21:0,21,182	0/1:25,0:21:13.61:14,0,169	0/0:18,0:14:3.89:0,4,115	0/0:25,0:25:68.96:0,69,594	0/0:20,0:20:47.94:0,48,406	0/0:14,0:14:32.95:0,33,282	0/0:34,0:35:92:0,92,784	0/0:17,0:17:41.98:0,42,362	0/0:36,0:36:95.96:0,96,827	0/0:20,0:20:53.97:0,54,469	0/0:14,0:14:35.93:0,36,302	0/0:26,1:27:29.74:0,30,475	0/0:24,0:24:56.95:0,57,490	0/0:17,0:18:44.01:0,44,368	0/0:20,0:21:59.02:0,59,501	0/0:27,1:28:35.84:0,36,539	1/1:3,12:15:36.10:398,36,0	0/0:17,0:17:44.91:0,45,377	0/0:31,0:31:74.94:0,75,651	0/0:16,0:16:41.97:0,42,361	0/0:15,0:15:38.97:0,39,334	0/0:23,1:24:26.74:0,27,454	0/0:11,0:11:32.98:0,33,283	0/0:25,0:25:53.95:0,54,468	0/0:22,0:22:59.97:0,60,514	0/0:23,0:23:9.81:0,10,391	0/0:6,0:6:14.99:0,15,130
chr10	102045401	.	T	TG	1398.50	PASS	AB=0.581;AC=9;AF=0.161;AN=56;BaseQRankSum=-2.609;DP=500;FS=0.000;HRun=9;HaplotypeScore=58.8504;InbreedingCoeff=0.8479;MQ=82.57;MQ0=0;MQRankSum=-1.658;QD=15.54;ReadPosRankSum=-1.323;VQSLOD=3.3131;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:80.93:0,81,698	0/0:9,0:9:23.99:0,24,208	0/0:19,0:18:41.97:0,42,360	0/0:17,0:17:34.78:0,35,278	0/0:24,0:25:65:0,65,548	0/0:10,0:10:23.99:0,24,208	0/0:22,0:22:65.99:0,66,573	0/0:18,0:18:29.95:0,30,257	0/0:23,0:23:47.98:0,48,417	0/0:13,0:12:20.98:0,21,182	0/0:16,0:16:32.98:0,33,286	1/1:4,19:23:39.10:424,39,0	1/1:4,15:19:13.05:372,13,0	0/0:18,0:18:47.97:0,48,413	0/0:21,0:21:41.96:0,42,365	0/0:12,0:12:26.99:0,27,234	0/0:11,0:11:26.99:0,27,234	0/1:5,12:18:53.25:361,0,53	0/0:9,0:9:20.99:0,21,182	0/0:20,0:20:53.98:0,54,466	0/0:22,0:26:52.82:0,53,410	0/0:18,0:18:38.99:0,39,338	0/0:19,0:19:41.97:0,42,365	0/0:18,0:18:44.97:0,45,391	0/0:14,0:14:32.99:0,33,286	1/1:5,11:16:27.05:288,27,0	0/0:18,0:18:50.99:0,51,443	1/1:5,8:14:11.87:114,12,0
chr10	102047024	.	T	TC	1432.12	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.903;DP=688;FS=2.237;HRun=1;HaplotypeScore=91.0130;InbreedingCoeff=0.9921;MQ=63.54;MQ0=1;MQRankSum=-1.227;QD=34.93;ReadPosRankSum=1.466;VQSLOD=3.7490;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.19:0,84,1063	0/0:14,0:14:36.12:0,36,467	0/0:36,0:32:92.76:0,93,1151	0/0:23,0:21:54.17:0,54,695	0/0:22,0:21:60.17:0,60,750	0/0:17,0:17:51.15:0,51,646	0/0:25,0:25:66.21:0,66,856	0/0:34,0:34:99:0,99,1245	0/0:36,0:36:99:0,105,1339	0/0:19,0:19:57.19:0,57,740	0/0:7,0:7:21.07:0,21,273	0/0:26,0:26:75.24:0,75,973	0/0:20,0:20:60.20:0,60,778	0/0:30,0:30:84.26:0,84,1073	0/0:32,0:32:96.31:0,96,1239	0/0:35,0:35:99:0,105,1362	0/0:33,0:33:96.78:0,97,1243	1/1:0,25:25:66.22:988,66,0	0/0:28,0:26:69.21:0,69,879	0/0:24,0:24:66.13:0,66,804	0/0:31,0:31:81.25:0,81,1031	0/0:17,0:17:51.13:0,51,638	0/0:17,0:17:42.14:0,42,543	0/0:38,0:38:99:0,112,1417	0/0:18,0:18:39.13:0,39,506	1/1:0,9:9:24.08:360,24,0	0/0:35,0:34:99:0,102,1309	1/1:1,6:7:15.05:225,15,0
chr10	102047462	.	G	GT	2056.55	PASS	AB=0.910;AC=29;AF=0.518;AN=56;BaseQRankSum=-3.808;DP=617;FS=12.597;HRun=14;HaplotypeScore=80.3355;InbreedingCoeff=0.4815;MQ=74.54;MQ0=0;MQRankSum=1.006;QD=5.00;ReadPosRankSum=-5.543;VQSLOD=-0.5654;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,19:24:25.24:214,25,0	1/1:3,0:3:2.99:23,3,0	0/0:18,0:17:12.09:0,12,64	0/1:15,1:13:0.08:0,0,28	1/1:9,3:27:25.32:251,25,0	0/1:30,2:33:48.54:49,0,191	0/1:10,5:15:10.44:10,0,77	1/1:13,16:31:44.66:352,45,0	0/1:18,6:24:0.08:0,0,127	0/0:23,0:23:31.93:0,32,200	0/0:19,0:21:39.31:0,39,241	1/1:3,15:18:8.91:64,9,0	1/1:10,12:23:17.83:144,18,0	0/1:22,0:22:37.68:54,0,38	0/1:27,2:29:47.28:47,0,104	1/1:6,19:26:2.13:155,2,0	0/0:32,0:34:49.11:0,49,316	0/0:4,0:18:26.45:0,26,76	1/1:10,19:32:59.49:469,59,0	1/1:9,12:23:29.52:202,30,0	1/1:7,12:19:9:79,9,0	0/0:20,0:20:20.41:0,20,134	0/0:19,0:20:13.28:0,13,186	0/0:23,0:23:2.69:0,3,144	0/1:16,0:17:6.87:7,0,82	0/0:7,0:20:26.40:0,26,75	1/1:16,13:28:14.99:129,15,0	0/0:0,0:9:14.04:0,14,40
chr10	102048804	.	C	CTCTCTCTATCTCTCTCCT	3037.26	PASS	AB=0.795;AC=4;AF=0.071;AN=56;BaseQRankSum=-0.136;DP=553;FS=6.264;HRun=0;HaplotypeScore=250.3097;InbreedingCoeff=0.3926;MQ=72.63;MQ0=3;MQRankSum=-4.823;QD=77.88;ReadPosRankSum=-0.202;VQSLOD=2.3241;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:39.09:0,39,1675	0/0:10,0:10:24.08:0,24,906	0/0:30,0:20:3.12:0,3,719	0/0:55,0:33:26.10:0,26,1062	0/0:17,0:17:45.14:0,45,1835	0/0:18,0:18:48.16:0,48,1671	0/0:16,0:16:36.07:0,36,1266	0/0:21,0:21:60.18:0,60,1887	0/0:17,0:17:51.17:0,51,2123	0/0:22,0:22:60.21:0,60,2627	0/0:9,0:9:21.07:0,21,842	0/0:25,0:25:75.24:0,75,3066	0/0:27,0:27:78.25:0,78,3329	0/0:27,0:27:75.21:0,75,3015	0/0:20,0:20:57.20:0,57,2447	0/0:11,0:11:33.11:0,33,1511	0/0:21,0:21:60.21:0,60,2719	0/1:4,6:13:99:680,0,100	0/0:9,0:9:27.09:0,27,991	0/0:17,0:17:51.18:0,51,2213	0/0:25,0:25:63.22:0,63,2357	0/0:24,0:24:66.23:0,66,2526	0/0:18,0:18:51.11:0,51,1733	0/0:20,0:20:60.21:0,60,2520	0/0:19,0:19:48.16:0,48,2077	0/1:21,0:21:99:2114,0,103	0/0:18,0:18:48.13:0,48,1996	1/1:5,0:5:12.03:353,12,0
chr10	102048818	.	C	CTCCT	671.79	PASS	AB=0.822;AC=3;AF=0.054;AN=56;BaseQRankSum=6.070;DP=625;FS=1.021;HRun=0;HaplotypeScore=126.9915;InbreedingCoeff=-0.0567;MQ=76.21;MQ0=3;MQRankSum=-4.555;QD=15.99;ReadPosRankSum=0.319;VQSLOD=3.5432;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:48.16:0,48,912	0/0:9,0:9:27.09:0,27,523	0/0:39,0:29:26:0,26,729	0/0:57,0:39:61.73:0,62,1058	0/0:18,0:18:51.17:0,51,977	0/0:22,0:22:54.13:0,54,992	0/0:16,0:16:48.14:0,48,894	0/0:19,0:19:54.17:0,54,975	0/0:18,0:18:54.17:0,54,969	0/0:21,0:21:63.18:0,63,1154	0/0:13,0:13:36.11:0,36,664	0/0:28,0:28:84.27:0,84,1550	0/0:31,0:31:90.31:0,90,1692	0/0:27,0:27:81.28:0,81,1569	0/0:23,0:23:66.23:0,66,1259	0/0:14,0:14:42.14:0,42,814	0/0:24,0:24:63.22:0,63,1208	0/1:14,0:14:74.62:75,0,193	0/0:13,0:13:36.12:0,36,669	0/0:24,0:24:72.25:0,72,1353	0/0:32,0:32:78.25:0,78,1412	0/0:23,0:23:60.21:0,60,1162	0/0:23,0:23:57.20:0,57,1104	0/0:26,0:26:69.24:0,69,1323	0/0:20,0:20:54.17:0,54,1013	0/1:18,6:24:99:543,0,675	0/0:20,0:20:60.21:0,60,1145	0/1:2,2:4:49.11:155,0,49
chr10	102049513	.	CAGAGAGAGAGAGAGAGAGAGAGAGAG	C	2495.18	PASS	AB=0.775;AC=11;AF=0.196;AN=56;BaseQRankSum=5.918;DP=552;FS=49.663;HRun=0;HaplotypeScore=273.2309;InbreedingCoeff=0.7074;MQ=57.85;MQ0=36;MQRankSum=-5.587;QD=19.49;ReadPosRankSum=1.665;VQSLOD=1.3299;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,9:31:1.71:196,0,2	1/1:8,4:11:3.01:202,3,0	0/0:40,0:15:1.55:0,2,4	0/0:63,0:20:4.37:0,4,47	1/1:15,3:18:3.01:113,3,0	0/0:17,0:17:30.09:0,30,2093	0/0:21,0:21:24.08:0,24,2016	0/0:27,0:24:30.10:0,30,1310	0/0:14,0:14:27.56:0,28,1986	0/0:16,0:16:29.58:0,30,1725	0/0:10,0:10:9.02:0,9,461	1/1:15,8:25:15.05:967,15,0	1/1:15,1:17:6.01:383,6,0	0/0:13,0:13:24.55:0,25,1397	0/0:24,0:23:27.09:0,27,2005	1/1:13,11:25:12.04:786,12,0	0/0:18,0:17:22.63:0,23,1410	0/0:16,0:16:24.05:0,24,1739	0/0:15,0:14:18.06:0,18,848	0/0:17,0:17:9.50:0,10,557	0/0:24,0:24:39.12:0,39,3080	0/0:2,0:2:6.02:0,6,404	0/0:12,0:11:12.04:0,12,990	0/0:23,0:21:21.07:0,21,1775	0/0:9,0:9:12.04:0,12,782	0/0:16,0:17:33.11:0,33,1489	0/0:21,0:21:30.09:0,30,2022	0/0:5,0:5:15.05:0,15,392
chr10	102050169	.	C	CCAGACAT	13991.56	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=0.706;DP=700;FS=3.189;HRun=0;HaplotypeScore=159.4166;InbreedingCoeff=0.9983;MQ=80.15;MQ0=0;MQRankSum=-17.023;QD=82.79;ReadPosRankSum=0.828;VQSLOD=5.3171;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,15:31:57.20:2201,57,0	1/1:0,10:11:30.10:1184,30,0	0/0:22,0:22:51.04:0,51,1105	0/0:24,0:24:56.88:0,57,1189	1/1:7,13:20:30.10:1182,30,0	0/0:36,0:36:99:0,99,2542	0/0:36,0:36:99:0,99,2495	0/0:36,0:36:96.30:0,96,2293	0/0:39,0:39:99:0,114,2909	0/0:23,0:23:66.23:0,66,1670	0/0:16,0:16:48.16:0,48,1238	1/1:7,21:29:75.26:2932,75,0	1/1:15,20:39:84.72:3047,85,0	0/0:20,0:20:54.17:0,54,1320	0/0:36,0:36:99:0,108,2699	1/1:9,15:27:60.20:2261,60,0	0/0:25,0:25:75.26:0,75,1892	1/1:3,9:12:30.10:1185,30,0	0/0:18,0:18:51.18:0,51,1309	0/0:31,0:31:87.28:0,87,2105	0/0:28,0:28:84.25:0,84,2081	0/0:18,0:18:51.17:0,51,1227	0/0:19,0:19:57.20:0,57,1468	0/0:25,0:25:75.24:0,75,1881	0/0:21,0:21:63.22:0,63,1599	0/0:28,0:28:75.22:0,75,1726	0/0:24,0:24:66.20:0,66,1597	0/0:6,0:6:18.06:0,18,464
chr10	102050684	.	T	TGCTATACATACCCCACGCCCC	4663.54	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.629;DP=645;FS=4.105;HRun=0;HaplotypeScore=309.1905;InbreedingCoeff=0.9241;MQ=88.26;MQ0=0;MQRankSum=-7.728;QD=33.79;ReadPosRankSum=-1.226;VQSLOD=2.4460;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:38.94:955,39,0	1/1:0,4:7:3.01:300,3,0	0/0:25,0:25:58.39:0,58,1090	0/0:26,0:26:50.12:0,50,798	1/1:1,15:22:14.79:667,15,0	0/0:20,0:20:57.04:0,57,1445	0/0:28,0:28:84.17:0,84,2476	0/0:33,0:33:93.23:0,93,1575	0/0:26,0:26:66.13:0,66,2493	0/0:18,0:18:54.15:0,54,1156	0/0:11,0:11:30.09:0,30,952	1/1:24,0:24:41.84:1093,42,0	1/1:27,0:27:41.74:797,42,0	0/0:43,0:43:99:0,117,4165	0/0:14,0:14:35.93:0,36,630	1/1:1,9:19:6.02:428,6,0	0/0:39,0:39:99:0,111,3907	1/1:2,2:17:6.02:423,6,0	0/0:18,0:18:51.06:0,51,1526	0/0:14,0:14:42:0,42,1696	0/0:53,0:53:99:0,153,5616	0/0:14,0:14:42.04:0,42,927	0/0:15,0:15:45.07:0,45,1339	0/0:35,0:35:99:0,105,4238	0/0:16,0:16:45.08:0,45,1315	0/0:19,0:19:57:0,57,1519	0/0:27,0:27:81.09:0,81,2535	0/0:13,0:13:35.95:0,36,1894
chr10	102050840	.	CGTAGTGA	C	5872.47	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.705;DP=542;FS=19.828;HRun=0;HaplotypeScore=144.9938;InbreedingCoeff=0.9872;MQ=87.30;MQ0=0;MQRankSum=-12.602;QD=58.14;ReadPosRankSum=-0.010;VQSLOD=3.6049;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,24:30:69.21:1626,69,0	1/1:1,9:10:27.09:718,27,0	0/0:13,0:13:29.45:0,29,873	0/0:29,0:29:80.94:0,81,2085	1/1:3,4:7:9.03:166,9,0	0/0:14,0:14:39.13:0,39,1437	0/0:33,0:33:99:0,99,3839	0/0:26,0:26:78.25:0,78,2913	0/0:15,0:15:45.15:0,45,1796	0/0:22,0:22:60.21:0,60,2454	0/0:16,0:16:45.15:0,45,1824	1/1:2,19:21:51.64:1293,52,0	1/1:1,13:14:33.11:854,33,0	0/0:30,0:30:87.30:0,87,3498	0/0:22,0:22:66.21:0,66,2605	1/1:2,5:7:18.06:444,18,0	0/0:30,0:30:90.29:0,90,3438	1/1:4,8:12:33.08:771,33,0	0/0:14,0:14:42.14:0,42,1583	0/0:11,0:11:33.11:0,33,1233	0/0:38,0:38:99:0,111,4175	0/0:17,0:17:48.16:0,48,1861	0/0:19,0:19:51.17:0,51,2029	0/0:34,0:34:99:0,99,3795	0/0:19,0:19:57.18:0,57,2179	0/0:13,0:13:39.13:0,39,1232	0/0:17,0:17:51.18:0,51,2089	0/0:9,0:9:27.06:0,27,752
chr10	102050903	.	CG	C	4319.16	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.401;DP=652;FS=7.661;HRun=6;HaplotypeScore=93.7245;InbreedingCoeff=0.9967;MQ=90.27;MQ0=0;MQRankSum=-5.947;QD=26.83;ReadPosRankSum=4.984;VQSLOD=4.8842;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,38:40:90.22:966,90,0	1/1:5,4:9:15.10:180,15,0	0/0:27,0:27:66.13:0,66,819	0/0:28,0:28:63.38:0,63,796	1/1:2,12:14:36.07:376,36,0	0/0:23,0:22:63.20:0,63,828	0/0:37,0:37:99:0,105,1333	0/0:33,0:33:81.26:0,81,1053	0/0:21,0:21:60.18:0,60,774	0/0:24,0:24:48.15:0,48,619	0/0:16,0:16:45.15:0,45,592	1/1:2,26:28:72.18:773,72,0	1/1:4,24:28:72.18:768,72,0	0/0:33,0:33:96.27:0,96,1220	0/0:23,0:23:63.18:0,63,794	1/1:1,19:20:54.13:580,54,0	0/0:25,0:25:72.23:0,72,947	1/1:0,22:22:63.16:677,63,0	0/0:15,0:15:39.12:0,39,500	0/0:17,0:17:48.16:0,48,629	0/0:29,0:29:87.26:0,87,1115	0/0:18,0:18:48.16:0,48,625	0/0:18,0:18:42.12:0,42,525	0/0:32,0:32:93.30:0,93,1224	0/0:18,0:18:45.15:0,45,590	0/0:18,0:18:54.18:0,54,710	0/0:27,0:27:75.24:0,75,984	0/0:9,0:9:24.06:0,24,300
chr10	102051188	.	C	CG	2991.21	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-5.647;DP=597;FS=2.581;HRun=5;HaplotypeScore=68.1000;InbreedingCoeff=0.9034;MQ=90.70;MQ0=0;MQRankSum=-3.992;QD=23.19;ReadPosRankSum=1.121;VQSLOD=2.6624;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,39:44:81.26:1065,81,0	1/1:1,9:10:24.04:296,24,0	0/0:26,0:26:60.12:0,60,623	0/0:23,0:23:57.01:0,57,568	1/1:2,13:15:35.84:469,36,0	0/0:21,0:21:62.17:0,62,636	0/0:24,0:24:63.14:0,63,668	0/0:31,0:31:60.12:0,60,630	0/0:17,0:17:48.12:0,48,515	0/0:19,0:19:33.06:0,33,344	0/1:14,0:14:9.74:10,0,257	1/1:2,9:11:24.08:316,24,0	1/1:0,15:15:39.13:512,39,0	0/0:28,0:28:84.07:0,84,876	0/0:25,0:25:61.14:0,61,701	1/1:2,18:20:39.13:513,39,0	0/0:45,0:45:99:0,123,1319	0/0:25,0:25:75.11:0,75,782	0/0:16,0:16:42.07:0,42,438	0/0:15,0:15:18.05:0,18,282	0/0:18,0:18:45.11:0,45,483	0/0:21,0:21:37.23:0,37,496	0/0:17,0:17:36.08:0,36,385	0/0:13,0:13:27.04:0,27,270	0/0:22,0:22:53.91:0,54,550	0/0:22,0:22:48.11:0,48,510	0/0:35,0:35:74.19:0,74,767	0/0:5,0:5:15.04:0,15,161
chr10	102054911	.	T	TAA	1116.55	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-4.786;DP=630;FS=0.592;HRun=10;HaplotypeScore=91.0956;InbreedingCoeff=0.8896;MQ=67.92;MQ0=0;MQRankSum=-1.294;QD=19.25;ReadPosRankSum=0.522;VQSLOD=2.7572;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,114,1159	0/0:8,0:8:17.96:0,18,174	0/0:11,0:11:22.79:0,23,200	0/0:7,0:7:14.72:0,15,151	0/0:17,0:17:45.07:0,45,451	0/0:27,0:28:71.37:0,71,712	0/0:19,0:19:39.04:0,39,397	0/0:28,0:30:65.53:0,66,634	0/0:24,0:25:56.82:0,57,561	0/0:35,0:37:95.43:0,95,991	0/0:19,0:20:44.77:0,45,439	0/0:20,0:20:51.08:0,51,519	0/0:28,0:28:72.12:0,72,732	0/0:30,0:30:75.98:0,76,751	0/0:33,0:33:75.10:0,75,755	0/0:27,0:27:72.11:0,72,726	0/0:35,0:36:89.83:0,90,877	1/1:1,2:17:8.46:164,8,0	0/0:26,0:28:65.56:0,66,626	0/0:13,0:13:29.82:0,30,288	0/0:17,0:19:44.78:0,45,431	0/0:18,0:18:51.09:0,51,512	0/0:14,0:14:30.02:0,30,305	0/0:27,0:29:86.64:0,87,836	0/0:12,0:13:25.10:0,25,298	1/1:9,20:31:2.39:719,2,0	0/0:20,0:20:54.10:0,54,549	1/1:0,10:10:24.08:358,24,0
chr10	102056456	.	AGTGTGTGTGTGT	A	1417.99	PASS	AB=0.765;AC=13;AF=0.271;AN=48;BaseQRankSum=6.249;DP=615;FS=1.881;HRun=0;HaplotypeScore=195.0563;InbreedingCoeff=0.6846;MQ=68.71;MQ0=19;MQRankSum=-5.804;QD=9.39;ReadPosRankSum=1.318;VQSLOD=2.7348;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,11:29:5.95:120,6,0	./.	./.	./.	1/1:16,0:14:2.22:7,2,0	0/0:8,0:8:6.02:0,6,342	0/0:32,0:34:51.17:0,51,2120	0/0:22,0:22:9.03:0,9,250	0/0:17,0:19:12.12:0,12,556	0/0:14,0:14:27.08:0,27,783	0/0:14,0:15:27.56:0,28,1160	1/1:18,12:28:15.01:419,15,0	0/1:18,7:23:25.08:137,0,25	0/0:19,0:24:27.06:0,27,370	0/0:21,0:22:24.55:0,25,933	1/1:12,6:20:14.90:574,15,0	0/0:21,0:23:42.06:0,42,1855	1/1:9,0:14:6.65:247,7,0	0/0:18,0:18:17.09:0,17,586	0/0:15,0:14:6.02:0,6,332	0/0:47,0:46:54.17:0,54,2067	0/0:16,0:17:24.30:0,24,841	0/0:12,0:14:6.02:0,6,287	0/0:23,0:27:35.37:0,35,909	0/0:17,0:17:24.55:0,25,935	1/1:16,0:16:3.01:66,3,0	0/0:15,0:18:27.09:0,27,1220	./.
chr10	102057482	.	CG	C	898.14	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.490;DP=563;FS=9.224;HRun=1;HaplotypeScore=58.4933;InbreedingCoeff=0.9430;MQ=85.42;MQ0=0;MQRankSum=-1.611;QD=30.97;ReadPosRankSum=0.044;VQSLOD=2.2021;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.30:0,96,1483	0/0:11,0:11:33.10:0,33,501	0/0:15,0:15:45.15:0,45,672	0/0:27,0:27:71.61:0,72,1079	0/0:15,0:15:38.87:0,39,582	0/0:27,0:27:81.22:0,81,1212	0/0:20,0:20:60.19:0,60,925	0/0:31,0:31:93.29:0,93,1411	0/0:21,0:21:63.19:0,63,977	0/0:18,0:18:54.10:0,54,766	0/0:10,0:10:30.10:0,30,478	0/0:13,0:13:39.06:0,39,546	0/0:24,0:24:69.22:0,69,1074	0/0:16,0:16:48.16:0,48,760	0/0:27,0:27:81.19:0,81,1228	0/0:27,0:27:81.26:0,81,1264	0/0:31,0:31:93.21:0,93,1380	0/0:26,0:26:75.11:0,75,1107	0/0:18,0:18:51.17:0,51,806	0/0:19,0:19:57.18:0,57,880	0/0:13,0:13:36.11:0,36,550	0/0:21,0:21:63.17:0,63,966	0/0:22,0:22:63.20:0,63,955	0/0:17,0:17:51.12:0,51,763	0/0:16,0:16:48.11:0,48,735	1/1:0,25:25:72.13:926,72,0	0/0:17,0:17:51.17:0,51,806	1/1:0,4:4:6.02:84,6,0
chr10	102057748	.	TGCGCGCGC	T	620.65	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=3.787;DP=478;FS=0.996;HRun=0;HaplotypeScore=126.5949;InbreedingCoeff=0.2998;MQ=72.46;MQ0=2;MQRankSum=-2.357;QD=11.49;ReadPosRankSum=0.205;VQSLOD=2.1357;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:36.07:0,36,717	0/0:10,0:9:13.58:0,14,136	0/0:13,0:7:3:0,3,29	0/1:18,0:11:20.28:20,0,54	0/0:7,0:7:14.97:0,15,222	0/0:21,0:21:57.19:0,57,2072	0/0:30,0:30:75.73:0,76,2472	0/0:27,0:27:36.02:0,36,862	0/0:6,0:6:9.03:0,9,358	0/0:20,0:20:54.19:0,54,1908	0/0:7,0:7:18.06:0,18,647	0/0:15,0:15:26.48:0,26,351	0/1:9,0:9:8:8,0,273	0/0:25,0:25:54.19:0,54,2032	0/0:18,0:18:42.14:0,42,1476	0/1:10,0:10:8.96:9,0,197	0/0:35,0:35:96.33:0,96,3536	0/0:15,0:15:27.90:0,28,446	0/0:13,0:15:33.10:0,33,845	0/0:20,0:20:45.15:0,45,1511	0/0:32,0:30:75.11:0,75,2135	0/0:11,0:11:27.08:0,27,687	0/0:9,0:9:24.08:0,24,762	0/0:28,0:28:78.27:0,78,2955	0/0:10,0:10:21.07:0,21,605	1/1:13,4:17:30.64:700,31,0	0/0:14,0:14:24.08:0,24,961	0/0:5,0:4:7.87:0,8,79
chr10	102057759	.	G	GCACACA	506.69	PASS	AB=0.944;AC=10;AF=0.179;AN=56;BaseQRankSum=7.029;DP=488;FS=6.416;HRun=0;HaplotypeScore=114.1662;InbreedingCoeff=0.1575;MQ=63.30;MQ0=4;MQRankSum=-5.664;QD=4.92;ReadPosRankSum=0.304;VQSLOD=1.8753;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:26.80:27,0,346	0/0:10,0:9:3.44:0,3,64	0/0:10,0:3:3.01:0,3,41	0/0:16,0:9:1.65:0,2,22	0/1:5,4:10:9.61:10,0,41	0/0:25,0:25:62.39:0,62,1460	0/0:34,0:34:83.73:0,84,1789	0/0:26,0:26:54.51:0,55,1026	0/0:9,0:9:21.07:0,21,467	0/0:21,0:21:60.19:0,60,1329	0/0:10,0:10:21.54:0,22,499	0/1:15,0:15:38.32:38,0,189	0/1:9,0:9:24.84:158,0,25	0/0:21,0:20:60.21:0,60,1407	0/0:18,0:18:54.16:0,54,1145	1/1:8,0:8:6.02:113,6,0	0/0:38,0:38:99:0,111,2574	0/1:11,0:11:40.04:40,0,208	0/0:12,0:12:36.11:0,36,737	0/0:20,0:20:48.14:0,48,1057	0/0:33,0:30:78.13:0,78,1509	0/0:9,0:9:27.09:0,27,619	0/0:13,0:13:39.12:0,39,793	0/0:36,0:35:93.32:0,93,2194	0/0:12,0:12:30.03:0,30,606	0/1:13,0:13:36.41:36,0,54	0/0:10,0:10:30.10:0,30,672	1/1:5,0:4:9.03:229,9,0
chr10	102058103	.	T	TA	1101.79	PASS	AB=0.926;AC=7;AF=0.125;AN=56;BaseQRankSum=-6.414;DP=606;FS=1.930;HRun=11;HaplotypeScore=65.3237;InbreedingCoeff=0.8604;MQ=80.10;MQ0=0;MQRankSum=0.361;QD=13.27;ReadPosRankSum=-0.894;VQSLOD=3.5533;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:48:99:0,114,861	0/0:9,0:9:20.92:0,21,163	0/0:24,0:23:13.68:0,14,184	0/0:16,0:18:13.88:0,14,97	0/0:19,0:20:34.86:0,35,260	0/0:16,0:16:41.83:0,42,325	0/0:23,0:25:48.86:0,49,355	0/0:19,0:20:42.95:0,43,328	0/0:20,0:21:40.10:0,40,304	0/0:23,0:23:50.78:0,51,394	0/0:18,0:18:19.47:0,19,297	0/0:13,0:13:14.87:0,15,116	0/0:12,0:12:32.85:0,33,254	0/0:23,0:23:62.75:0,63,488	0/0:28,0:29:76.74:0,77,586	0/0:21,0:21:47.81:0,48,372	0/0:32,1:34:55.66:0,56,599	1/1:3,23:26:66.13:670,66,0	0/0:13,0:13:32.87:0,33,255	0/0:25,0:25:62.74:0,63,488	0/1:21,2:25:3.03:3,0,325	0/0:21,0:21:53.79:0,54,418	0/0:22,0:22:53.77:0,54,415	0/0:31,0:31:86.63:0,87,671	0/0:17,0:17:41.82:0,42,325	1/1:6,15:21:42.07:419,42,0	0/0:18,0:19:46.83:0,47,354	1/1:6,5:11:15.03:152,15,0
chr10	102059057	.	TTCTCTCTCTCTCTCTC	T	510.69	PASS	AB=0.727;AC=11;AF=0.212;AN=52;BaseQRankSum=3.999;DP=422;FS=4.665;HRun=0;HaplotypeScore=161.1269;InbreedingCoeff=0.4331;MQ=64.93;MQ0=18;MQRankSum=-2.469;QD=7.62;ReadPosRankSum=-0.912;VQSLOD=2.4206;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,2:6:3.01:55,3,0	0/0:25,0:19:2.49:0,2,15	0/0:27,0:14:3.01:0,3,74	1/1:10,0:12:3.01:36,3,0	0/0:15,0:13:12.93:0,13,265	0/0:19,0:19:18.06:0,18,698	0/0:21,0:21:7.84:0,8,217	0/0:18,0:18:12.04:0,12,427	0/0:13,0:13:18.06:0,18,980	0/0:10,0:10:6.02:0,6,293	1/1:10,4:15:5.28:147,5,0	1/1:8,3:12:6.02:226,6,0	0/0:17,0:17:21.07:0,21,1113	0/0:10,0:10:7.38:0,7,357	1/1:10,3:13:3.01:130,3,0	0/0:15,0:14:18.53:0,19,826	0/0:11,0:13:4.95:0,5,122	0/0:16,0:17:0.94:0,1,149	./.	0/0:13,0:20:3.01:0,3,75	0/0:16,0:17:15.91:0,16,444	0/0:6,0:6:9.03:0,9,258	0/0:24,0:20:12.04:0,12,543	0/0:16,0:16:12.04:0,12,656	0/1:5,0:6:46.99:51,0,47	0/0:14,0:12:15.01:0,15,196	0/0:6,0:6:2.98:0,3,21
chr10	102059839	.	GTA	G	5250.16	PASS	AB=0.933;AC=19;AF=0.339;AN=56;BaseQRankSum=13.893;DP=646;FS=16.416;HRun=0;HaplotypeScore=92.3149;InbreedingCoeff=0.8978;MQ=64.68;MQ0=5;MQRankSum=2.476;QD=23.54;ReadPosRankSum=4.004;VQSLOD=4.6019;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,21:28:36.08:453,36,0	1/1:1,13:14:33.06:416,33,0	0/0:8,0:5:9.42:0,9,84	0/0:24,0:8:8.05:0,8,40	1/1:3,30:34:59.95:745,60,0	0/0:20,0:20:45.12:0,45,687	0/1:13,1:14:4.73:5,0,405	0/0:48,0:48:11.09:0,11,1480	0/0:17,0:17:45.12:0,45,681	0/0:29,1:30:43.46:0,43,1190	0/0:26,1:27:40.47:0,40,1194	1/1:2,24:26:51.16:642,51,0	1/1:1,17:18:29.95:378,30,0	0/0:20,0:20:48.15:0,48,759	0/0:23,0:23:22.74:0,23,847	1/1:3,21:24:39.12:491,39,0	0/0:15,1:16:10.37:0,10,701	1/1:5,0:23:62.83:739,63,0	0/0:21,0:20:12.94:0,13,521	0/0:24,0:24:69.22:0,69,1105	0/0:21,1:22:16.31:0,16,749	0/0:8,0:8:21.06:0,21,317	0/0:23,0:23:60.19:0,60,950	0/0:19,0:19:48.15:0,48,763	0/0:30,0:30:72.22:0,72,1141	1/1:4,33:37:99:1231,102,0	0/0:43,0:43:99:0,102,1513	1/1:0,5:5:12.04:151,12,0
chr10	102059841	.	AT	A	297.62	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=7.385;DP=643;FS=0.791;HRun=1;HaplotypeScore=98.0838;InbreedingCoeff=0.5389;MQ=63.17;MQ0=5;MQRankSum=-1.293;QD=6.47;ReadPosRankSum=0.943;VQSLOD=0.5383;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:19.22:0,19,203	0/0:14,0:14:6.70:0,7,35	0/0:7,1:5:10.55:0,11,96	0/1:23,0:6:10.33:10,0,22	0/0:34,0:34:16.91:0,17,110	0/0:22,0:22:66.16:0,66,930	0/0:14,0:14:36.59:0,37,557	0/0:47,0:47:99:0,137,2039	0/0:17,0:17:51.17:0,51,795	0/0:29,0:29:81.75:0,82,1287	0/0:27,0:27:78.74:0,79,1239	0/0:27,0:27:14.01:0,14,88	0/0:19,0:19:10.72:0,11,74	0/0:20,0:20:60.19:0,60,899	0/0:24,0:24:70.12:0,70,1073	0/0:22,0:22:9.12:0,9,39	0/0:16,0:16:45.62:0,46,720	1/1:5,16:23:47.52:389,48,0	0/0:20,0:19:54.80:0,55,781	0/0:25,0:25:75.24:0,75,1173	0/0:21,0:21:60.65:0,61,914	0/0:8,0:8:24.08:0,24,374	0/0:24,0:24:72.23:0,72,1105	0/0:19,0:19:48.12:0,48,767	0/0:29,0:29:84.28:0,84,1304	0/0:36,0:36:30.06:0,30,168	0/0:42,0:42:99:0,126,1908	0/0:5,0:5:1.89:0,2,5
chr10	102059980	.	GCACA	G	1328.46	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.039;DP=785;FS=8.151;HRun=0;HaplotypeScore=128.5561;InbreedingCoeff=0.9786;MQ=58.54;MQ0=7;MQRankSum=1.097;QD=30.19;ReadPosRankSum=1.107;VQSLOD=3.4869;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:94.27:0,94,2132	0/0:12,0:14:26.32:0,26,605	0/0:30,0:16:23.89:0,24,394	0/0:42,0:23:32.74:0,33,538	0/0:26,0:26:69.20:0,69,1617	0/0:22,0:22:51.18:0,51,1235	0/0:28,0:30:59.94:0,60,1360	0/0:43,0:44:87:0,87,1835	0/0:19,0:19:48.16:0,48,1177	0/0:31,0:32:80.95:0,81,1702	0/0:20,0:21:41.88:0,42,946	0/0:32,0:32:84.19:0,84,1889	0/0:34,0:35:96.06:0,96,2254	0/0:25,0:25:69.24:0,69,1666	0/0:33,0:34:77.96:0,78,1753	0/0:34,0:34:90.24:0,90,1962	0/0:22,0:23:56.93:0,57,1348	0/0:14,0:15:29.84:0,30,680	0/0:12,0:12:23.67:0,24,370	0/0:15,0:16:38.87:0,39,862	0/0:44,0:45:99:0,111,2376	0/0:19,0:19:57.14:0,57,1213	0/0:22,0:23:62.95:0,63,1477	0/0:26,0:29:65.16:0,65,1431	0/0:25,0:29:74.45:0,74,1573	1/1:5,28:32:21.84:1243,22,0	0/0:41,1:43:51.90:0,52,2256	1/1:2,9:11:11.99:201,12,0
chr10	102060943	.	T	TAC	944.73	PASS	AB=0.894;AC=17;AF=0.340;AN=50;BaseQRankSum=-1.391;DP=397;FS=3.169;HRun=0;HaplotypeScore=63.2965;InbreedingCoeff=0.1074;MQ=55.81;MQ0=12;MQRankSum=1.350;QD=4.65;ReadPosRankSum=-0.229;VQSLOD=1.7006;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:25:39.92:40,0,79	1/1:12,0:12:9:92,9,0	./.	./.	0/1:11,7:19:61.39:97,0,61	./.	0/0:18,0:17:2.64:0,3,32	1/1:17,0:17:7.19:44,7,0	0/0:12,0:12:9.02:0,9,97	0/0:16,0:16:11.94:0,12,115	0/0:5,0:5:6:0,6,54	0/1:9,3:11:37.07:174,0,37	0/1:6,0:4:31.40:35,0,31	0/1:17,0:16:4.88:5,0,195	0/0:6,0:6:8.97:0,9,84	0/1:2,10:12:17.12:162,0,17	0/0:32,0:33:34.96:0,35,304	0/1:12,0:18:0.68:1,0,31	0/0:12,0:12:1.99:0,2,6	1/1:7,1:9:12.01:136,12,0	1/1:24,0:22:8.95:84,9,0	0/0:7,0:11:11.73:0,12,94	0/0:7,0:8:14.84:0,15,123	0/0:23,0:23:9.78:0,10,251	0/1:13,0:13:16.40:16,0,33	0/0:10,0:16:8.52:0,9,42	0/1:18,0:17:8.21:215,0,8	0/0:9,0:11:5.27:0,5,27
chr10	102061770	.	G	GA	620.06	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.869;DP=476;FS=0.921;HRun=8;HaplotypeScore=43.9057;InbreedingCoeff=0.9360;MQ=80.03;MQ0=0;MQRankSum=-0.346;QD=26.96;ReadPosRankSum=-0.277;VQSLOD=3.8710;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.04:0,72,659	0/0:4,0:4:12.01:0,12,110	0/0:18,0:17:27.06:0,27,302	0/0:10,0:9:12.01:0,12,109	0/0:16,0:16:42.02:0,42,384	0/0:21,0:21:45.02:0,45,411	0/0:24,0:24:57.03:0,57,521	0/0:25,0:26:65.02:0,65,568	0/0:17,0:17:42.02:0,42,384	0/0:12,0:12:27.01:0,27,244	0/0:14,0:14:39.01:0,39,357	0/0:19,0:19:39.02:0,39,357	0/0:10,0:10:27.01:0,27,247	0/0:20,0:20:54.02:0,54,494	0/0:20,0:20:51.03:0,51,467	0/0:22,0:22:56.75:0,57,521	0/0:20,0:20:48.02:0,48,439	0/0:16,0:16:33.69:0,34,341	0/0:16,0:16:45:0,45,403	0/0:16,0:16:45.02:0,45,412	0/0:20,0:20:51.01:0,51,463	0/0:21,0:21:60.03:0,60,549	0/0:16,0:16:42.01:0,42,384	0/0:17,0:17:36.01:0,36,329	0/0:18,0:18:47.99:0,48,433	1/1:1,19:20:32.71:630,33,0	0/0:12,0:12:30.02:0,30,275	1/1:0,3:3:9.03:104,9,0
chr10	102064657	.	G	GA	5231.55	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-8.478;DP=646;FS=9.289;HRun=7;HaplotypeScore=68.2597;InbreedingCoeff=0.9998;MQ=88.10;MQ0=0;MQRankSum=-2.196;QD=25.52;ReadPosRankSum=2.614;VQSLOD=5.2725;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,49:53:99:1588,132,0	1/1:2,12:14:33.06:381,33,0	0/0:27,0:28:61.16:0,61,514	0/0:29,0:29:58.94:0,59,542	1/1:3,19:22:54.17:648,54,0	0/0:18,0:18:48.07:0,48,463	0/0:29,0:29:78.09:0,78,741	0/0:26,0:26:72.09:0,72,686	0/0:22,0:22:60.04:0,60,562	0/0:26,0:26:72.11:0,72,694	0/0:14,0:14:33.05:0,33,318	1/1:2,16:18:42.13:505,42,0	1/1:3,14:17:39.12:469,39,0	0/0:19,0:19:48.06:0,48,455	0/0:28,0:28:72.03:0,72,670	1/1:2,20:22:57.17:686,57,0	0/0:14,0:14:36.01:0,36,333	1/1:2,11:13:33.10:394,33,0	0/0:16,0:16:42.03:0,42,395	0/0:27,0:27:57.26:0,57,697	0/0:33,0:33:84.12:0,84,806	0/0:22,0:22:63.10:0,63,607	0/0:24,0:24:69.04:0,69,649	0/0:31,0:31:84.13:0,84,806	0/0:12,0:12:30.93:0,31,291	1/1:3,1:28:70.05:373,70,0	0/0:23,0:23:60.07:0,60,574	1/1:3,0:18:36.96:187,37,0
chr10	102065108	.	GTCTCTC	G	506.40	PASS	AC=6;AF=0.136;AN=44;BaseQRankSum=3.690;DP=592;FS=6.766;HRun=0;HaplotypeScore=125.7194;InbreedingCoeff=0.5859;MQ=62.49;MQ0=26;MQRankSum=-3.152;QD=7.91;ReadPosRankSum=-1.185;VQSLOD=1.6017;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:9.03:0,9,249	./.	./.	./.	0/0:23,0:23:3.01:0,3,94	0/0:22,0:22:14.98:0,15,331	0/0:26,0:28:24.08:0,24,646	0/0:40,0:37:1.77:0,2,4	0/0:13,0:10:9.03:0,9,283	0/0:27,0:27:17.74:0,18,383	0/0:20,0:20:8.15:0,8,252	0/0:18,0:15:6.02:0,6,169	0/0:13,0:15:15:0,15,284	0/0:17,0:18:19.31:0,19,442	0/0:18,0:20:18.05:0,18,411	0/0:22,0:21:5.46:0,5,88	0/0:21,0:24:21.03:0,21,495	0/0:19,0:19:20.99:0,21,510	1/1:22,0:22:3.01:50,3,0	1/1:13,4:17:3.01:60,3,0	./.	0/0:18,0:17:9.02:0,9,186	0/0:25,0:26:11.15:0,11,348	0/0:18,0:22:21.65:0,22,525	./.	0/0:19,0:18:5.97:0,6,63	1/1:13,7:23:30.10:510,30,0	./.
chr10	102065126	.	C	CTGTG	381.03	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.176;DP=567;FS=0.967;HRun=0;HaplotypeScore=116.1575;InbreedingCoeff=0.8014;MQ=49.20;MQ0=34;MQRankSum=-4.373;QD=17.32;ReadPosRankSum=0.638;VQSLOD=2.8846;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:56.44:0,56,791	0/0:10,0:10:12.03:0,12,184	0/0:22,0:6:9.02:0,9,117	0/0:22,0:6:12:0,12,142	0/0:23,0:23:33.08:0,33,485	0/0:27,0:26:51.14:0,51,800	0/0:25,0:24:57.19:0,57,960	0/0:31,0:25:69.13:0,69,949	0/0:14,0:11:26.88:0,27,460	0/0:27,0:27:81.25:0,81,1302	0/0:21,0:20:45.13:0,45,684	0/0:18,0:15:9.24:0,9,373	0/0:17,0:16:6.95:0,7,489	0/0:20,0:20:44.87:0,45,692	0/0:24,0:23:54.14:0,54,857	0/0:23,0:22:42.06:0,42,649	0/0:21,0:21:51.17:0,51,770	0/0:16,0:16:34.10:0,34,522	0/0:19,0:19:57.18:0,57,878	0/0:21,0:21:27.09:0,27,425	0/0:9,0:7:12.04:0,12,196	0/0:19,0:18:39.12:0,39,626	0/0:23,0:22:57.18:0,57,906	0/0:30,0:26:53.75:0,54,813	0/0:13,0:13:15.04:0,15,224	1/1:11,4:15:26.54:429,27,0	0/0:21,0:20:48.05:0,48,569	1/1:6,0:5:5.93:63,6,0
chr10	102065993	.	T	TTTTGTGTGTGTGTGTG	2903.44	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=5.205;DP=668;FS=1.329;HRun=0;HaplotypeScore=275.7102;InbreedingCoeff=0.6155;MQ=63.57;MQ0=5;MQRankSum=-5.046;QD=34.16;ReadPosRankSum=-4.096;VQSLOD=1.8306;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:68.52:0,69,2423	0/0:11,0:11:30.07:0,30,818	0/0:44,0:29:77.62:0,78,1071	0/0:33,0:18:38.06:0,38,492	0/0:32,0:32:90.19:0,90,2675	0/0:19,0:19:52.03:0,52,1703	0/1:17,0:17:15.74:16,0,1379	0/0:30,0:30:90.19:0,90,1694	0/0:21,0:21:62.93:0,63,2367	0/0:31,0:31:90.28:0,90,3056	0/0:25,0:25:69.23:0,69,2751	0/0:17,0:17:51.10:0,51,1675	0/0:20,0:19:54.06:0,54,1505	0/0:13,0:13:39.12:0,39,1447	0/0:17,0:17:51.06:0,51,1760	0/0:17,0:17:48.16:0,48,1617	0/0:20,0:20:57.13:0,57,1770	0/0:27,0:27:61.15:0,61,2856	0/0:14,0:14:38.10:0,38,847	0/0:27,0:27:81.24:0,81,2741	0/0:14,0:14:39.08:0,39,1096	0/0:41,0:42:99:0,120,3623	0/0:20,0:20:57.14:0,57,1782	0/0:32,0:32:87.23:0,87,3347	0/1:27,0:27:84.35:84,0,2488	1/1:31,0:30:81.01:2197,81,0	0/0:21,0:21:55.41:0,55,2075	1/1:3,4:10:12.04:739,12,0
chr10	102070157	.	CAT	C	174.27	PASS	AB=0.976;AC=17;AF=0.340;AN=50;BaseQRankSum=5.196;DP=245;FS=0.000;HRun=0;HaplotypeScore=49.6962;InbreedingCoeff=0.4377;MQ=77.70;MQ0=5;MQRankSum=-0.537;QD=1.83;ReadPosRankSum=0.361;VQSLOD=1.3218;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:14:6.02:74,6,0	1/1:1,3:4:3.01:36,3,0	0/0:10,0:8:0:0,0,0	0/0:10,0:6:1.10:0,1,7	1/1:5,4:9:4.51:51,5,0	0/1:12,1:13:4.10:4,0,432	./.	0/0:34,0:34:76.49:0,76,1171	0/0:2,0:2:6.02:0,6,95	0/0:4,0:4:3.01:0,3,49	0/0:3,0:3:6.02:0,6,92	1/1:2,2:4:5.83:38,6,0	1/1:8,2:10:2.27:22,2,0	0/0:6,0:6:12.04:0,12,193	0/0:6,0:6:9.03:0,9,148	1/1:4,2:6:8.51:63,9,0	0/0:28,0:28:35.39:0,35,1073	1/1:6,0:6:5.29:22,5,0	0/0:16,0:14:18.06:0,18,288	0/0:4,0:4:6.02:0,6,95	0/0:5,0:5:6.02:0,6,94	./.	0/0:5,0:5:9.03:0,9,148	./.	0/1:13,0:13:6.75:7,0,404	0/1:14,0:14:1.46:1,0,107	0/0:8,0:8:15.05:0,15,237	0/0:4,0:4:1.58:0,2,24
chr10	102070466	.	A	AG	9407.80	PASS	AB=0.910;AC=52;AF=0.963;AN=54;BaseQRankSum=-2.952;DP=379;FS=2.020;HRun=6;HaplotypeScore=38.1467;InbreedingCoeff=-0.0438;MQ=60.89;MQ0=4;MQRankSum=-1.866;QD=24.95;ReadPosRankSum=2.476;VQSLOD=4.2639;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:36.11:446,36,0	./.	0/1:22,2:8:30.67:31,0,41	0/1:21,3:10:33.73:65,0,34	1/1:0,7:7:21.07:262,21,0	1/1:3,17:20:45.14:555,45,0	1/1:3,7:10:12.04:151,12,0	1/1:9,11:20:33.04:360,33,0	1/1:1,9:10:24.08:301,24,0	1/1:1,9:10:27.08:328,27,0	1/1:1,11:12:27.09:340,27,0	1/1:2,12:14:33.11:415,33,0	1/1:1,14:15:42.13:528,42,0	1/1:2,8:10:24.08:301,24,0	1/1:3,20:23:51.16:642,51,0	1/1:0,11:11:27.09:338,27,0	1/1:3,10:14:28.33:342,28,0	1/1:4,12:16:33.11:415,33,0	1/1:2,10:11:21.05:248,21,0	1/1:2,7:9:15.05:189,15,0	1/1:6,9:14:24.08:300,24,0	1/1:0,6:6:15.05:188,15,0	1/1:0,8:8:21.07:264,21,0	1/1:1,19:20:51.16:640,51,0	1/1:1,5:6:15.05:189,15,0	1/1:0,17:17:51.15:629,51,0	1/1:1,22:22:66.20:828,66,0	1/1:1,3:3:9.03:113,9,0
chr10	102072332	.	CGT	C	2337.84	PASS	AB=0.920;AC=21;AF=0.375;AN=56;BaseQRankSum=10.637;DP=749;FS=2.590;HRun=0;HaplotypeScore=140.8922;InbreedingCoeff=0.3738;MQ=52.95;MQ0=15;MQRankSum=1.549;QD=5.36;ReadPosRankSum=1.682;VQSLOD=2.8220;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,25:38:44.87:512,45,0	1/1:0,10:11:14.88:157,15,0	0/1:54,1:19:17.17:17,0,162	0/1:56,1:14:9.57:10,0,256	1/1:8,22:30:9.01:312,9,0	0/0:19,0:19:42.10:0,42,617	0/1:29,1:30:32.33:32,0,865	0/0:33,0:34:53.73:0,54,758	0/1:16,2:19:4.76:5,0,555	0/1:31,4:33:74.47:74,0,910	0/1:17,3:20:77.13:77,0,302	1/1:4,16:20:24.07:286,24,0	1/1:4,25:31:57.17:679,57,0	0/1:27,2:29:2.34:2,0,875	0/0:21,2:23:24.47:0,24,835	1/1:4,15:19:29.92:336,30,0	0/0:27,0:26:31.33:0,31,445	0/1:17,2:19:1.01:1,0,475	0/0:18,0:18:45.55:0,46,620	0/0:24,0:24:29.88:0,30,472	0/0:34,4:38:45.54:0,46,1186	0/1:19,3:22:26.33:26,0,563	0/0:20,2:22:21.06:0,21,325	0/0:24,2:26:27.46:0,27,910	0/0:22,0:22:20.98:0,21,286	0/0:7,0:26:44.33:0,44,412	0/0:24,0:24:39.96:0,40,813	0/0:3,0:10:21:0,21,185
chr10	102072649	.	CA	C	15771.29	PASS	AC=54;AF=0.964;AN=56;BaseQRankSum=-1.056;DP=445;FS=0.000;HRun=1;HaplotypeScore=166.8855;InbreedingCoeff=0.6372;MQ=43.75;MQ0=4;MQRankSum=-1.334;QD=35.68;ReadPosRankSum=1.542;VQSLOD=4.4174;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:57.15:771,57,0	1/1:0,15:14:39.13:544,39,0	1/1:2,1:3:6.02:71,6,0	0/0:3,0:3:2.04:0,2,10	1/1:0,12:12:15.05:200,15,0	1/1:0,12:12:36.08:476,36,0	1/1:0,18:18:48.07:626,48,0	1/1:2,9:11:30.10:412,30,0	1/1:0,25:25:66.18:899,66,0	1/1:1,22:23:69.23:952,69,0	1/1:1,8:9:21:264,21,0	1/1:0,26:26:78.22:1062,78,0	1/1:1,17:17:48.12:648,48,0	1/1:0,24:24:66.17:897,66,0	1/1:1,27:27:75.25:1039,75,0	1/1:0,19:19:57.19:790,57,0	1/1:0,15:15:45.15:628,45,0	1/1:0,9:8:24.08:335,24,0	1/1:0,12:12:33.11:453,33,0	1/1:0,17:17:45.15:628,45,0	1/1:0,15:15:27.09:375,27,0	1/1:1,16:17:51.03:633,51,0	1/1:1,19:20:44.39:606,44,0	1/1:0,17:17:42.14:584,42,0	1/1:0,13:13:27.09:377,27,0	1/1:0,10:10:27.05:354,27,0	1/1:0,23:23:66.18:897,66,0	1/1:0,6:6:18.06:252,18,0
chr10	102072744	.	TA	T	11590.76	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=1.709;DP=313;FS=3.214;HRun=1;HaplotypeScore=343.0117;InbreedingCoeff=0.4968;MQ=32.26;MQ0=0;MQRankSum=-1.732;QD=37.15;ReadPosRankSum=1.687;VQSLOD=3.4449;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:69.22:892,69,0	1/1:0,3:3:9.03:110,9,0	./.	0/0:1,0:1:3.01:0,3,30	1/1:0,11:11:33.09:386,33,0	1/1:0,11:11:33.11:429,33,0	1/1:0,18:18:54.17:689,54,0	1/1:0,13:13:39.13:526,39,0	1/1:0,12:11:33.10:404,33,0	1/1:0,21:21:63.20:839,63,0	1/1:0,3:3:9.03:111,9,0	1/1:0,21:21:63.20:797,63,0	1/1:0,8:8:24.08:302,24,0	1/1:0,20:20:60.19:748,60,0	1/1:0,10:10:30.09:377,30,0	1/1:0,17:17:51.16:653,51,0	1/1:0,10:10:27.09:352,27,0	1/1:0,9:9:27.09:363,27,0	1/1:0,6:6:18.06:247,18,0	1/1:0,13:13:39.12:487,39,0	1/1:0,3:3:9.03:112,9,0	1/1:0,12:12:34.35:412,34,0	1/1:1,17:18:52.97:616,53,0	1/1:0,6:6:6.02:80,6,0	1/1:0,13:13:37.36:451,37,0	1/1:0,14:14:42.14:563,42,0	1/1:0,16:16:48.15:607,48,0	1/1:0,1:1:3.01:39,3,0
chr10	102072751	.	C	CG	12300.23	PASS	AC=52;AF=1.000;AN=52;BaseQRankSum=1.223;DP=312;FS=0.000;HRun=0;HaplotypeScore=352.9225;InbreedingCoeff=-0.0174;MQ=28.94;MQ0=0;MQRankSum=0.260;QD=39.42;ReadPosRankSum=1.721;VQSLOD=3.0854;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:69.23:936,69,0	1/1:0,3:3:9.03:123,9,0	./.	./.	1/1:0,11:11:33.10:411,33,0	1/1:0,11:11:33.11:442,33,0	1/1:0,18:18:54.18:715,54,0	1/1:0,13:13:39.13:536,39,0	1/1:0,12:11:33.11:439,33,0	1/1:0,21:21:63.20:867,63,0	1/1:0,3:3:9.03:118,9,0	1/1:0,21:21:63.21:849,63,0	1/1:0,8:8:24.08:316,24,0	1/1:0,20:20:60.20:791,60,0	1/1:0,10:10:30.10:404,30,0	1/1:0,17:17:51.17:688,51,0	1/1:0,10:10:27.09:361,27,0	1/1:0,9:9:27.09:387,27,0	1/1:0,6:6:18.06:257,18,0	1/1:0,13:13:39.13:513,39,0	1/1:0,3:3:9.03:116,9,0	1/1:0,12:12:36.12:478,36,0	1/1:1,17:18:49.37:640,49,0	1/1:0,6:6:6.02:80,6,0	1/1:0,13:13:39.13:525,39,0	1/1:0,14:14:42.14:594,42,0	1/1:0,16:16:48.16:670,48,0	1/1:0,1:1:3.01:43,3,0
chr10	102073248	.	A	AT	5237.09	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-12.651;DP=514;FS=2.127;HRun=7;HaplotypeScore=50.1593;InbreedingCoeff=0.9871;MQ=77.34;MQ0=1;MQRankSum=-2.137;QD=29.76;ReadPosRankSum=1.388;VQSLOD=5.3659;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:33:81.24:969,81,0	1/1:2,9:11:27.08:326,27,0	0/0:14,0:13:19.93:0,20,188	0/0:10,0:10:11.37:0,11,92	1/1:2,22:24:63.11:728,63,0	0/0:20,0:20:60.06:0,60,567	0/0:22,0:22:63.10:0,63,608	0/0:16,0:16:39.05:0,39,377	0/0:18,0:18:51.07:0,51,488	0/0:13,0:13:24.03:0,24,232	0/0:16,0:16:45.06:0,45,429	1/1:0,16:16:45.14:544,45,0	1/1:0,20:20:54.17:652,54,0	0/0:17,0:17:51.08:0,51,492	0/0:21,0:21:48.05:0,48,454	1/1:1,12:13:11.27:374,11,0	0/0:27,0:27:78.08:0,78,739	1/1:3,20:22:57.17:688,57,0	0/0:24,0:24:66.02:0,66,617	0/0:21,0:21:63.10:0,63,608	0/0:17,0:17:42.04:0,42,399	0/0:16,0:16:36.05:0,36,348	0/0:9,0:9:27.04:0,27,260	0/0:19,0:19:57.04:0,57,541	0/0:23,0:23:66.07:0,66,626	1/1:7,18:25:54.14:631,54,0	0/0:15,0:15:45.06:0,45,429	1/1:2,9:11:27.08:326,27,0
chr10	102073852	.	ATC	A	239.89	PASS	AB=1.000;AC=15;AF=0.288;AN=52;BaseQRankSum=5.770;DP=479;FS=9.412;HRun=0;HaplotypeScore=66.8596;InbreedingCoeff=0.7128;MQ=81.49;MQ0=0;MQRankSum=-2.404;QD=4.53;ReadPosRankSum=-1.780;VQSLOD=0.5765;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,2:3:6.02:79,6,0	1/1:1,2:3:3.01:39,3,0	0/1:21,0:19:13.35:13,0,480	0/0:27,0:24:5.84:0,6,345	1/1:3,3:6:6.02:79,6,0	0/0:20,0:20:57.18:0,57,936	0/0:14,0:14:33.11:0,33,566	0/0:38,0:38:99:0,99,1614	0/0:22,0:22:63.22:0,63,1065	0/0:28,0:28:78.27:0,78,1324	0/0:19,0:19:45.14:0,45,740	1/1:0,4:4:3.01:39,3,0	./.	0/0:28,0:28:78.27:0,78,1337	0/0:25,0:25:69.24:0,69,1183	./.	0/0:35,0:35:90.31:0,90,1535	1/1:9,0:9:5.21:30,5,0	0/0:15,0:15:33.10:0,33,534	0/0:30,0:30:81.28:0,81,1382	0/0:22,0:22:57.19:0,57,969	0/0:15,0:15:45.14:0,45,737	0/0:13,0:13:39.13:0,39,669	0/0:14,0:14:39.13:0,39,668	0/0:27,0:27:81.27:0,81,1349	1/1:1,2:3:5.98:59,6,0	0/0:30,0:30:81.26:0,81,1328	1/1:1,3:4:5.98:60,6,0
chr10	102073860	.	C	CCATATATATATATAT	619.63	PASS	AB=0.958;AC=16;AF=0.308;AN=52;BaseQRankSum=6.074;DP=472;FS=6.605;HRun=0;HaplotypeScore=189.3834;InbreedingCoeff=0.6789;MQ=81.98;MQ0=0;MQRankSum=-0.619;QD=8.61;ReadPosRankSum=-2.456;VQSLOD=1.4728;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:6.02:79,6,0	1/1:2,0:2:3.01:39,3,0	0/1:18,0:17:1.89:2,0,1254	0/1:26,0:25:34.17:34,0,402	1/1:3,0:3:6.02:79,6,0	0/0:19,0:19:57.19:0,57,2309	0/0:13,0:13:33.11:0,33,1495	0/0:40,0:40:99:0,114,3859	0/0:26,0:26:75.24:0,75,2995	0/0:30,0:30:90.31:0,90,3538	0/0:17,0:17:47.73:0,48,1717	1/1:4,0:4:3.01:39,3,0	./.	0/0:29,0:29:87.30:0,87,3513	0/0:26,0:26:78.27:0,78,3179	./.	0/0:34,0:34:99:0,99,4247	1/1:0,2:8:6.02:333,6,0	0/0:12,0:12:36.11:0,36,1189	0/0:28,0:28:81.28:0,81,3512	0/0:20,0:20:57.20:0,57,2330	0/0:18,0:18:51.16:0,51,1846	0/0:16,0:16:42.14:0,42,1630	0/0:13,0:13:39.13:0,39,1722	0/0:29,0:29:87.29:0,87,3376	1/1:2,0:2:6.02:95,6,0	0/0:27,0:27:81.26:0,81,3201	1/1:4,0:4:5.98:79,6,0
chr10	102074852	.	A	AGG	1190.61	PASS	AB=0.807;AC=11;AF=0.196;AN=56;BaseQRankSum=11.326;DP=610;FS=1.114;HRun=0;HaplotypeScore=114.3920;InbreedingCoeff=0.3144;MQ=55.18;MQ0=4;MQRankSum=-9.550;QD=7.35;ReadPosRankSum=4.865;VQSLOD=3.3860;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,3:21:79.38:108,0,79	0/1:6,5:11:64.78:166,0,65	0/0:30,0:17:45.15:0,45,724	0/0:19,0:10:24.08:0,24,388	0/1:17,4:21:65.53:66,0,135	0/0:32,0:32:90.29:0,90,1442	0/0:22,0:22:63.22:0,63,1027	0/0:29,0:29:84.28:0,84,1341	0/0:25,0:25:75.24:0,75,1194	0/0:26,0:26:77.92:0,78,1189	0/0:9,0:9:24.08:0,24,389	1/1:20,9:29:33.08:356,33,0	1/1:20,4:24:2.43:165,2,0	0/0:22,0:22:66.21:0,66,1051	0/0:27,0:27:78.22:0,78,1194	0/1:16,4:20:73.71:163,0,74	0/0:27,0:27:66.42:0,66,1141	1/1:9,3:12:3.90:111,4,0	0/0:23,0:23:65.43:0,65,1009	0/0:26,0:26:78.20:0,78,1217	0/0:18,0:18:54.18:0,54,879	0/0:28,0:28:81.26:0,81,1277	0/0:19,0:19:57.19:0,57,926	0/0:25,0:25:72.22:0,72,1125	0/0:12,0:12:36.12:0,36,586	0/1:18,6:24:91.91:207,0,92	0/0:26,0:26:78.27:0,78,1271	0/0:3,0:3:5.40:0,5,24
chr10	102074853	.	A	AGGAG	4922.68	PASS	AB=0.744;AC=14;AF=0.250;AN=56;BaseQRankSum=12.969;DP=617;FS=2.528;HRun=0;HaplotypeScore=125.9739;InbreedingCoeff=0.6596;MQ=55.25;MQ0=3;MQRankSum=-12.772;QD=28.62;ReadPosRankSum=4.512;VQSLOD=4.9222;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,7:25:9.47:475,0,9	0/1:5,0:10:2.31:464,0,2	0/0:28,0:17:45.12:0,45,805	0/0:19,0:10:30.06:0,30,524	0/1:11,6:22:67.14:504,0,67	0/0:31,0:31:90.25:0,90,1653	0/0:22,0:22:66.18:0,66,1178	0/0:30,0:30:87.28:0,87,1625	0/0:25,0:25:75.23:0,75,1391	0/0:28,0:28:65.61:0,66,1339	0/0:10,0:10:27.06:0,27,467	1/1:20,0:29:20.87:713,21,0	1/1:20,1:25:19.66:480,20,0	0/0:23,0:23:66.18:0,66,1170	0/0:26,0:26:75.21:0,75,1305	1/1:9,7:20:17.16:656,17,0	0/0:27,0:27:74.97:0,75,1221	1/1:3,6:13:18.47:591,18,0	0/0:22,0:22:63.07:0,63,1057	0/0:26,0:26:78.17:0,78,1292	0/0:18,0:18:54.17:0,54,1022	0/0:27,0:27:81.25:0,81,1542	0/0:19,0:19:57.17:0,57,1066	0/0:26,0:26:72.15:0,72,1352	0/0:12,0:12:36.12:0,36,718	1/1:8,9:25:3.50:983,4,0	0/0:26,0:26:78.24:0,78,1467	0/1:3,0:3:4.64:56,0,5
chr10	102074856	.	A	AGGAAAGGAGGAA	11286.09	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.975;DP=626;FS=0.000;HRun=0;HaplotypeScore=199.3490;InbreedingCoeff=0.9801;MQ=56.31;MQ0=3;MQRankSum=-13.103;QD=63.05;ReadPosRankSum=-0.570;VQSLOD=4.4052;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:16.16:1041,16,0	1/1:10,0:10:27.09:1110,27,0	0/0:28,0:17:42.10:0,42,1046	0/0:18,0:11:30.06:0,30,750	1/1:22,0:22:42.14:1471,42,0	0/0:30,0:30:87.25:0,87,2824	0/0:24,0:24:63.19:0,63,1976	0/0:32,0:32:87.28:0,87,2445	0/0:25,0:25:75.25:0,75,2151	0/0:26,0:26:56.63:0,57,2110	0/0:9,0:9:24.07:0,24,713	1/1:28,0:28:30.10:1792,30,0	1/1:8,18:30:27.56:1146,28,0	0/0:22,0:22:54.18:0,54,1802	0/0:24,0:24:63.20:0,63,1984	1/1:20,0:20:45.15:1840,45,0	0/0:25,0:25:27.32:0,27,1808	1/1:13,0:13:22.32:573,22,0	0/0:24,0:24:48.16:0,48,1390	0/0:27,0:27:66.20:0,66,1981	0/0:20,0:20:54.17:0,54,1665	0/0:27,0:27:81.25:0,81,2605	0/0:20,0:20:51.18:0,51,1814	0/0:25,0:25:36.65:0,37,2245	0/0:13,0:13:36.12:0,36,1236	1/1:25,0:25:63.20:2184,63,0	0/0:27,0:27:78.22:0,78,2486	1/1:3,0:3:6.02:128,6,0
chr10	102074857	.	G	GGAAAGGAGGAAG	11286.09	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.957;DP=630;FS=0.000;HRun=0;HaplotypeScore=200.4778;InbreedingCoeff=0.9801;MQ=57.22;MQ0=3;MQRankSum=-12.891;QD=63.05;ReadPosRankSum=-0.971;VQSLOD=4.2890;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:16.16:1041,16,0	1/1:10,0:10:27.09:1110,27,0	0/0:29,0:18:44.14:0,44,1052	0/0:19,0:11:30.06:0,30,750	1/1:23,0:23:42.14:1471,42,0	0/0:30,0:30:87.25:0,87,2824	0/0:24,0:24:63.19:0,63,1976	0/0:33,0:33:87.28:0,87,2445	0/0:25,0:25:75.25:0,75,2151	0/0:27,0:27:56.63:0,57,2110	0/0:9,0:9:24.07:0,24,713	1/1:9,13:29:30.10:1792,30,0	1/1:27,0:27:27.56:1146,28,0	0/0:22,0:22:54.18:0,54,1802	0/0:23,0:23:63.20:0,63,1984	1/1:21,0:21:45.15:1840,45,0	0/0:24,0:24:27.79:0,28,1809	1/1:13,0:13:22.32:573,22,0	0/0:26,0:26:48.16:0,48,1390	0/0:26,0:26:66.20:0,66,1981	0/0:20,0:20:54.17:0,54,1665	0/0:28,0:28:81.25:0,81,2605	0/0:20,0:20:51.18:0,51,1814	0/0:25,0:25:36.65:0,37,2245	0/0:14,0:14:36.12:0,36,1236	1/1:25,0:25:63.20:2184,63,0	0/0:27,0:27:78.22:0,78,2486	1/1:3,0:3:6.02:128,6,0
chr10	102074858	.	G	GA	641.18	PASS	AB=0.904;AC=9;AF=0.161;AN=56;BaseQRankSum=11.851;DP=631;FS=0.509;HRun=2;HaplotypeScore=110.1450;InbreedingCoeff=0.0778;MQ=58.18;MQ0=3;MQRankSum=-9.725;QD=3.93;ReadPosRankSum=-0.822;VQSLOD=0.0466;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,3:28:18.14:18,0,162	0/1:9,1:10:37.88:108,0,38	0/0:27,0:18:48.11:0,48,577	0/0:19,0:12:30.09:0,30,371	0/1:19,4:23:99:127,0,114	0/0:30,0:30:87.24:0,87,1052	0/0:24,0:24:72.19:0,72,855	0/0:35,0:35:99:0,99,1205	0/0:26,0:26:75.24:0,75,929	0/0:26,0:26:75.23:0,75,918	0/0:9,0:9:27.08:0,27,335	1/1:26,0:26:26.57:111,27,0	0/1:26,1:27:50.80:60,0,51	0/0:21,0:21:57.18:0,57,704	0/0:23,0:23:66.19:0,66,798	0/1:16,5:21:17.64:187,0,18	0/0:24,0:24:61.95:0,62,748	0/0:13,0:13:25.03:0,25,158	0/0:26,0:26:66.14:0,66,762	0/0:28,0:28:69.21:0,69,844	0/0:20,0:20:60.18:0,60,731	0/0:28,0:28:84.23:0,84,1015	0/0:20,0:20:54.17:0,54,669	0/0:25,0:25:69.22:0,69,855	0/0:15,0:15:42.12:0,42,505	0/1:22,3:25:99:140,0,217	0/0:28,0:28:81.21:0,81,973	0/1:3,0:3:24.26:37,0,24
chr10	102075438	.	AT	A	3882.55	PASS	AB=0.929;AC=19;AF=0.339;AN=56;BaseQRankSum=13.026;DP=617;FS=1.553;HRun=10;HaplotypeScore=61.9601;InbreedingCoeff=0.9162;MQ=77.35;MQ0=0;MQRankSum=-4.360;QD=20.33;ReadPosRankSum=2.699;VQSLOD=4.7197;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,27:33:68.97:599,69,0	1/1:2,7:9:17.98:156,18,0	0/0:21,0:20:37.81:0,38,369	0/1:12,1:11:28.08:28,0,84	1/1:2,25:27:65.97:573,66,0	0/0:20,0:20:19.07:0,19,439	0/0:19,0:19:57.14:0,57,622	0/0:40,0:40:99:0,99,1077	0/0:22,0:22:63.16:0,63,690	0/0:28,0:28:57.15:0,57,626	0/0:22,0:22:60.14:0,60,652	1/1:1,17:18:50.99:443,51,0	1/1:2,19:21:56.98:495,57,0	0/0:15,1:16:16.04:0,16,396	0/0:31,0:31:75.20:0,75,830	1/1:2,16:18:44.99:391,45,0	0/0:23,0:23:66.07:0,66,683	1/1:1,19:20:56.99:495,57,0	0/0:21,0:21:44.31:0,44,615	0/0:34,0:34:90.22:0,90,979	0/0:19,0:19:54.15:0,54,597	0/0:17,0:17:48.13:0,48,531	0/0:22,0:22:45.12:0,45,498	0/0:20,0:20:57.15:0,57,630	0/0:27,0:27:72.04:0,72,755	1/1:4,18:22:53.98:469,54,0	0/0:24,0:23:66.18:0,66,727	1/1:0,10:10:26.99:234,27,0
chr10	102075589	.	CATT	C	7763.96	PASS	AB=0.947;AC=19;AF=0.339;AN=56;BaseQRankSum=13.471;DP=580;FS=0.351;HRun=0;HaplotypeScore=88.0278;InbreedingCoeff=0.9500;MQ=84.19;MQ0=0;MQRankSum=-2.577;QD=40.44;ReadPosRankSum=3.825;VQSLOD=5.6513;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:81.14:1484,81,0	1/1:0,9:9:17.96:335,18,0	0/0:19,0:19:50.95:0,51,1094	0/0:18,0:18:46.60:0,47,802	1/1:0,25:25:48.16:883,48,0	0/0:21,0:21:63.17:0,63,1451	0/0:26,0:26:78.24:0,78,1746	0/0:24,0:24:72.25:0,72,1714	0/0:21,0:21:63.22:0,63,1501	0/0:21,0:21:60.18:0,60,1258	0/0:23,0:23:69.24:0,69,1614	1/1:0,22:22:60.20:1095,60,0	1/1:0,19:20:51.17:917,51,0	0/1:17,1:18:1.71:2,0,1127	0/0:25,0:25:75.24:0,75,1779	1/1:0,15:15:42.14:762,42,0	0/0:27,0:27:74.77:0,75,1758	1/1:0,15:15:36.12:670,36,0	0/0:24,0:24:72.23:0,72,1719	0/0:23,0:23:69.24:0,69,1676	0/0:21,0:21:63.18:0,63,1446	0/0:13,0:13:39.13:0,39,960	0/0:15,0:15:45.14:0,45,1059	0/0:30,0:30:90.27:0,90,2141	0/0:12,0:12:36.12:0,36,887	1/1:0,23:23:69.22:1225,69,0	0/0:25,0:25:75.26:0,75,1817	1/1:0,8:8:21.07:391,21,0
chr10	102076482	.	GCAGA	G	577.08	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.044;DP=656;FS=0.000;HRun=0;HaplotypeScore=107.2928;InbreedingCoeff=0.9980;MQ=80.48;MQ0=0;MQRankSum=-0.408;QD=36.07;ReadPosRankSum=1.064;VQSLOD=3.8065;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,3471	0/0:18,0:18:54.17:0,54,1381	0/0:29,0:29:76.72:0,77,1617	0/0:16,0:16:28.57:0,29,874	0/0:31,0:31:87.23:0,87,2119	0/0:18,0:18:51.14:0,51,1247	0/0:25,0:25:72.22:0,72,1764	0/0:29,0:29:75.24:0,75,1883	0/0:17,0:17:51.18:0,51,1360	0/0:22,0:22:60.20:0,60,1529	0/0:28,0:28:84.29:0,84,2232	0/0:22,0:22:63.22:0,63,1612	0/0:26,0:26:69.21:0,69,1746	0/0:23,0:23:66.23:0,66,1748	0/0:28,0:28:81.28:0,81,2122	0/0:18,0:18:51.17:0,51,1360	0/0:25,0:25:72.20:0,72,1790	1/1:0,16:16:36.12:672,36,0	0/0:12,0:12:36.10:0,36,861	0/0:25,0:25:75.22:0,75,1888	0/0:19,0:19:51.14:0,51,1220	0/0:22,0:22:63.17:0,63,1513	0/0:28,0:28:81.24:0,81,1984	0/0:27,0:27:78.27:0,78,2080	0/0:32,0:32:93.32:0,93,2443	0/0:17,0:17:51.16:0,51,1300	0/0:24,0:24:69.22:0,69,1782	0/0:9,0:9:27.07:0,27,662
chr10	102078630	.	A	AACACACAC	6281.53	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=0.351;DP=680;FS=0.509;HRun=0;HaplotypeScore=181.0370;InbreedingCoeff=0.8365;MQ=61.20;MQ0=5;MQRankSum=-11.441;QD=30.79;ReadPosRankSum=-2.820;VQSLOD=4.1200;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,6:24:6.02:156,6,0	1/1:10,7:18:21.07:838,21,0	0/0:29,0:17:20.34:0,20,299	0/0:29,0:16:1.65:0,2,201	1/1:23,10:37:23.24:1151,23,0	0/0:23,0:24:48.06:0,48,1126	0/1:20,0:20:6.86:7,0,691	0/0:23,0:25:45.13:0,45,933	0/0:19,0:21:39.09:0,39,869	0/0:33,0:33:57.18:0,57,1330	0/0:28,0:30:63.06:0,63,1235	1/1:19,6:30:24.17:1316,24,0	1/1:15,10:27:27.09:1030,27,0	0/0:28,0:28:54.19:0,54,1312	0/0:25,0:26:54.17:0,54,1288	1/1:11,5:17:30.10:1141,30,0	0/0:25,0:27:45.13:0,45,1034	1/1:10,0:9:6.02:123,6,0	0/0:22,0:25:12.84:0,13,457	0/0:28,0:29:66.13:0,66,1362	0/0:16,0:18:39.11:0,39,857	0/0:21,0:25:23.10:0,23,817	0/0:29,0:30:39.22:0,39,1295	0/0:20,0:21:39.11:0,39,870	0/0:21,0:24:54.18:0,54,1230	1/1:11,0:11:6.02:206,6,0	0/0:29,0:28:48.05:0,48,1028	1/1:10,0:10:9.03:314,9,0
chr10	102078742	.	G	GTACCATA	1103.84	PASS	AB=0.545;AC=1;AF=0.019;AN=54;BaseQRankSum=4.761;DP=668;FS=7.030;HRun=0;HaplotypeScore=166.3688;InbreedingCoeff=-0.0253;MQ=88.00;MQ0=0;MQRankSum=-4.318;QD=91.99;ReadPosRankSum=1.290;VQSLOD=4.4369;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,3112	0/0:11,0:11:33.11:0,33,912	0/0:29,0:29:85.51:0,86,2006	0/0:19,0:19:54:0,54,1286	0/0:28,0:28:81.28:0,81,2224	0/0:20,0:20:57.18:0,57,1535	0/0:22,0:22:66.22:0,66,1747	0/0:30,0:30:84.28:0,84,2229	0/0:35,0:35:99:0,102,2727	0/0:34,0:34:99:0,102,2759	0/0:21,0:21:60.21:0,60,1630	0/0:26,0:26:78.22:0,78,2053	0/0:31,0:31:90.31:0,90,2469	0/0:22,0:22:66.23:0,66,1789	0/0:39,0:39:99:0,117,3186	0/0:17,0:17:51.18:0,51,1426	0/0:38,0:38:99:0,108,2916	0/0:1,0:1:3.01:0,3,84	0/0:23,0:23:69.24:0,69,1799	0/0:23,0:23:66.23:0,66,1810	0/0:26,0:26:75.26:0,75,1998	0/0:18,0:18:54.17:0,54,1416	0/0:19,0:19:51.18:0,51,1426	0/0:32,0:32:93.32:0,93,2520	0/0:19,0:19:54.19:0,54,1415	0/1:2,9:12:50.53:1178,0,51	0/0:31,0:31:93.29:0,93,2412	./.
chr10	102079514	.	AGCCTTCCT	A	685.94	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.332;DP=676;FS=0.000;HRun=0;HaplotypeScore=160.6189;InbreedingCoeff=0.9659;MQ=84.08;MQ0=0;MQRankSum=-4.659;QD=34.30;ReadPosRankSum=0.479;VQSLOD=3.2466;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,4690	0/0:12,0:12:36.12:0,36,1592	0/0:30,0:30:80.32:0,80,3204	0/0:22,0:22:63.22:0,63,2578	0/0:33,0:33:90.31:0,90,3831	0/0:28,0:28:84.27:0,84,3602	0/0:30,0:30:84.27:0,84,3526	0/0:28,0:28:81.26:0,81,3143	0/0:25,0:25:69.24:0,69,3035	0/0:21,0:21:63.21:0,63,2494	0/0:14,0:14:42.14:0,42,1861	0/0:19,0:19:57.20:0,57,2499	0/0:29,0:29:87.26:0,87,3494	0/0:19,0:19:54.19:0,54,2337	0/0:29,0:29:87.30:0,87,3856	0/0:27,0:27:78.27:0,78,3458	0/0:33,0:33:93.79:0,94,4007	1/1:0,20:20:30.02:780,30,0	0/0:7,0:7:21.07:0,21,734	0/0:27,0:27:78.27:0,78,3350	0/0:27,0:27:78.25:0,78,3191	0/0:21,0:21:63.19:0,63,2476	0/0:26,0:26:75.24:0,75,3213	0/0:28,0:28:81.26:0,81,3432	0/0:28,0:28:81.24:0,81,3124	0/0:17,0:17:51.17:0,51,2103	0/0:33,0:33:96.32:0,96,4001	0/0:4,0:4:12.04:0,12,476
chr10	102080008	.	CACACAAGG	C	7051.04	PASS	AB=0.535;AC=11;AF=0.196;AN=56;BaseQRankSum=14.096;DP=663;FS=1.375;HRun=0;HaplotypeScore=171.3637;InbreedingCoeff=0.8515;MQ=71.46;MQ0=0;MQRankSum=-12.952;QD=52.23;ReadPosRankSum=-0.642;VQSLOD=4.8132;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:30:57.20:1563,57,0	1/1:1,11:12:21.07:536,21,0	0/0:22,0:21:47.58:0,48,1921	0/0:20,0:19:54.18:0,54,1983	1/1:5,22:27:45.15:1218,45,0	0/0:19,0:19:57.18:0,57,2326	0/0:21,0:21:54.14:0,54,2193	0/0:34,0:34:99:0,99,4220	0/0:28,0:28:78.25:0,78,2963	0/0:30,0:30:75.26:0,75,3236	0/0:30,0:30:84.26:0,84,3364	0/1:3,20:23:80.06:1277,0,80	1/1:3,19:22:39.13:1069,39,0	0/0:17,0:17:48.16:0,48,2069	0/0:32,0:32:96.33:0,96,4115	1/1:4,17:21:51.17:1388,51,0	0/0:27,0:27:78.27:0,78,3200	0/0:14,0:14:36.12:0,36,1551	0/0:14,0:14:36.12:0,36,1487	0/0:38,0:38:99:0,108,4511	0/0:30,0:30:87.19:0,87,3580	0/0:22,0:22:66.23:0,66,2754	0/0:17,0:17:42.14:0,42,1809	0/0:35,0:35:96.33:0,96,3973	0/0:27,0:27:78.27:0,78,3390	0/0:27,0:27:81.25:0,81,3306	0/0:23,0:23:66.23:0,66,2796	0/0:1,0:1:3.01:0,3,131
chr10	102080420	.	CGA	C	4861.97	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.466;DP=627;FS=2.906;HRun=0;HaplotypeScore=73.0780;InbreedingCoeff=0.9992;MQ=75.91;MQ0=0;MQRankSum=-3.233;QD=45.87;ReadPosRankSum=3.566;VQSLOD=6.5729;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:45.15:734,45,0	1/1:0,11:11:33.11:538,33,0	0/0:16,0:16:42.13:0,42,796	0/0:11,0:11:29.28:0,29,475	1/1:0,26:26:72.18:1143,72,0	0/0:21,0:21:63.22:0,63,1279	0/0:15,0:15:45.11:0,45,852	0/0:26,0:26:72.25:0,72,1441	0/0:21,0:21:63.22:0,63,1259	0/0:26,0:26:78.27:0,78,1580	0/0:37,0:37:99:0,111,2249	1/1:0,17:17:51.17:832,51,0	1/1:0,13:13:39.13:636,39,0	0/0:21,0:21:63.22:0,63,1267	0/0:29,0:29:87.30:0,87,1738	1/1:0,22:22:60.20:979,60,0	0/0:20,0:20:60.21:0,60,1217	0/0:14,0:14:39.09:0,39,734	0/0:31,0:31:81.27:0,81,1605	0/0:42,0:42:99:0,126,2547	0/0:9,0:9:27.02:0,27,505	0/0:16,0:16:48.16:0,48,974	0/0:31,0:31:93.32:0,93,1875	0/0:8,0:8:24.08:0,24,487	0/0:43,0:43:99:0,129,2588	0/0:25,0:25:75.26:0,75,1523	0/0:36,0:36:99:0,108,2169	0/0:23,0:23:69.24:0,69,1399
chr10	102080603	.	TA	T	1895.78	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.501;DP=706;FS=5.150;HRun=1;HaplotypeScore=66.5754;InbreedingCoeff=0.9985;MQ=87.00;MQ0=0;MQRankSum=-1.778;QD=37.17;ReadPosRankSum=1.724;VQSLOD=4.2828;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.23:0,75,1169	0/0:7,0:7:21.07:0,21,330	0/0:28,0:28:78.94:0,79,1292	0/0:20,0:20:60.13:0,60,849	0/0:33,0:33:96.31:0,96,1511	0/0:28,0:28:84.27:0,84,1310	0/0:30,0:30:90.27:0,90,1391	0/0:31,0:31:90.31:0,90,1438	0/0:32,0:32:96.33:0,96,1519	0/0:33,0:33:99:0,99,1562	0/0:24,0:24:72.25:0,72,1150	0/0:24,0:24:72.23:0,72,1126	0/0:19,0:19:57.18:0,57,887	0/0:22,0:22:66.23:0,66,1052	0/0:30,0:30:90.31:0,90,1437	0/0:34,0:34:99:0,99,1523	0/0:13,0:13:39.13:0,39,618	1/1:0,13:13:36.12:503,36,0	0/0:29,0:29:87.29:0,87,1364	0/0:23,0:23:66.21:0,66,1029	0/0:42,0:42:99:0,120,1859	0/0:24,0:24:72.25:0,72,1151	0/0:20,0:20:60.19:0,60,936	0/0:29,0:29:84.29:0,84,1339	0/0:23,0:23:66.20:0,66,1008	1/1:0,20:20:57.18:780,57,0	0/0:32,0:32:96.33:0,96,1534	1/1:0,18:18:54.18:755,54,0
chr10	102080963	.	ATTC	A	2879.24	PASS	AB=0.888;AC=17;AF=0.304;AN=56;BaseQRankSum=5.834;DP=546;FS=7.345;HRun=0;HaplotypeScore=116.5932;InbreedingCoeff=0.5543;MQ=59.01;MQ0=12;MQRankSum=-2.946;QD=13.84;ReadPosRankSum=0.456;VQSLOD=2.9078;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:11.99:116,12,0	1/1:11,1:12:17.99:180,18,0	0/0:43,0:18:44.91:0,45,407	0/0:40,0:14:16.37:0,16,283	1/1:24,1:25:71.87:650,72,0	0/0:25,0:25:69.13:0,69,1143	0/0:14,0:14:35.98:0,36,503	1/1:22,0:20:1.08:254,1,0	0/0:21,0:21:54.13:0,54,910	0/0:23,0:23:66.18:0,66,1077	0/0:20,0:20:51.01:0,51,777	1/1:19,1:20:54.05:542,54,0	1/1:17,4:21:60:564,60,0	0/0:14,0:14:42.12:0,42,800	0/0:17,0:17:45.06:0,45,725	0/1:14,2:15:1.74:311,0,2	0/0:22,0:21:60.06:0,60,964	0/0:12,0:11:14.56:0,15,111	0/1:20,0:17:98.18:193,0,98	0/1:12,15:27:86.17:159,0,86	0/1:9,0:9:37.76:38,0,132	0/0:19,0:19:48.10:0,48,793	0/0:15,0:15:42.04:0,42,687	0/0:10,0:10:24.05:0,24,438	0/0:17,0:17:42.05:0,42,626	0/0:14,0:14:22.84:0,23,186	0/1:22,0:22:59.89:60,0,372	0/0:12,0:12:9.12:0,9,75
chr10	102080968	.	TCTTCTCCTC	T	7195.57	PASS	AB=0.965;AC=19;AF=0.339;AN=56;BaseQRankSum=6.736;DP=539;FS=3.952;HRun=0;HaplotypeScore=157.4142;InbreedingCoeff=0.2859;MQ=58.55;MQ0=15;MQRankSum=-5.119;QD=29.61;ReadPosRankSum=1.020;VQSLOD=4.5943;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:12.04:300,12,0	1/1:2,10:12:18.06:500,18,0	0/0:43,0:18:44.51:0,45,468	0/0:40,0:14:32.13:0,32,327	1/1:17,11:28:72.05:1464,72,0	0/0:24,0:24:72.18:0,72,2541	0/0:14,0:14:30.04:0,30,1047	0/1:22,0:19:99:219,0,300	0/0:21,0:20:57.15:0,57,1966	0/0:24,0:24:72.20:0,72,2285	0/0:18,0:18:54.02:0,54,1622	1/1:11,9:20:54.13:1279,54,0	1/1:11,9:20:60.14:1428,60,0	0/0:14,0:14:42.13:0,42,1731	0/0:16,0:16:48.08:0,48,1579	0/1:8,7:14:13.43:882,0,13	0/0:24,0:23:66.09:0,66,2093	0/1:12,0:11:65.91:182,0,66	0/1:19,0:16:99:155,0,622	0/1:25,0:25:99:154,0,563	0/1:10,0:9:23.71:24,0,576	0/0:19,0:19:51.14:0,51,1755	0/0:15,0:15:20.79:0,21,1385	0/0:9,0:9:24.05:0,24,927	0/0:15,0:15:45.06:0,45,1265	0/1:14,0:14:75.23:250,0,75	0/1:20,0:20:52.68:53,0,1409	0/1:13,0:12:11.52:305,0,12
chr10	102080989	.	CCTCCTCCTCCTT	C	4620.40	PASS	AB=0.877;AC=19;AF=0.339;AN=56;BaseQRankSum=13.156;DP=504;FS=3.902;HRun=0;HaplotypeScore=179.5056;InbreedingCoeff=0.6090;MQ=51.86;MQ0=24;MQRankSum=-10.085;QD=23.82;ReadPosRankSum=3.490;VQSLOD=4.0814;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:2.33:116,2,0	1/1:9,0:9:17.79:247,18,0	0/0:27,0:7:2.66:0,3,81	0/1:26,0:7:2.25:2,0,26	1/1:22,0:22:47.57:519,48,0	0/0:24,0:24:72.18:0,72,2500	0/1:15,0:13:19.67:20,0,927	0/0:28,0:22:46.37:0,46,973	0/0:18,0:17:51.16:0,51,2038	0/0:20,0:20:60.20:0,60,2556	0/0:17,0:17:44.68:0,45,1838	1/1:15,0:15:36.59:472,37,0	1/1:19,0:18:48.10:665,48,0	0/0:17,0:17:51.15:0,51,1929	0/0:14,0:14:42.10:0,42,1724	1/1:14,0:13:13.05:419,13,0	0/0:28,0:25:69.95:0,70,2649	1/1:10,0:9:18.04:444,18,0	0/0:21,0:16:42.08:0,42,1235	0/0:19,0:19:33.10:0,33,1245	0/0:11,0:10:30.10:0,30,1172	0/0:20,0:20:60.15:0,60,1944	0/1:12,0:12:8.12:8,0,1261	0/0:13,0:11:30.09:0,30,1298	0/0:15,0:15:33.09:0,33,1222	0/1:11,4:15:99:822,0,145	0/0:18,0:18:54.19:0,54,2373	0/1:6,13:17:1.73:887,0,2
chr10	102080990	.	C	CTTCT	1471.49	PASS	AB=0.977;AC=11;AF=0.196;AN=56;BaseQRankSum=7.930;DP=499;FS=5.513;HRun=0;HaplotypeScore=121.6282;InbreedingCoeff=-0.0052;MQ=49.62;MQ0=23;MQRankSum=-4.130;QD=8.97;ReadPosRankSum=0.369;VQSLOD=2.6930;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:19.16:19,0,130	0/1:9,0:9:26.04:46,0,26	0/0:26,0:6:7.38:0,7,109	0/1:23,0:4:2.27:2,0,19	0/1:23,0:23:51.73:59,0,52	0/0:24,0:24:72.19:0,72,1318	0/0:15,0:13:33.22:0,33,620	0/0:27,0:23:47.52:0,48,622	0/0:18,0:17:51.16:0,51,973	0/0:21,0:21:60.20:0,60,1150	0/0:17,0:17:45.14:0,45,844	0/1:15,0:15:77.15:77,0,114	0/1:19,0:18:69.94:70,0,200	0/0:17,0:17:51.16:0,51,971	0/0:14,0:14:42.11:0,42,749	0/1:14,0:13:25.47:25,0,129	0/0:28,0:25:67.02:0,67,1199	0/1:10,0:9:58.11:131,0,58	0/0:19,0:14:42.13:0,42,765	0/0:18,0:18:33.11:0,33,593	0/0:11,0:10:30.10:0,30,582	0/0:20,0:20:60.17:0,60,1073	0/0:12,0:12:25.82:0,26,643	0/0:13,0:11:30.10:0,30,576	0/0:14,0:14:33.09:0,33,590	0/1:11,4:15:16.11:650,0,16	0/0:19,0:19:54.19:0,54,1067	1/1:17,2:17:17.84:542,18,0
chr10	102080992	.	CCTCCTCCTTCTTCTTCTTCCT	C	5512.01	PASS	AB=0.987;AC=17;AF=0.304;AN=56;BaseQRankSum=11.845;DP=488;FS=6.686;HRun=0;HaplotypeScore=248.2780;InbreedingCoeff=0.7224;MQ=49.55;MQ0=24;MQRankSum=-8.872;QD=34.24;ReadPosRankSum=0.893;VQSLOD=2.5505;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:10.75:261,11,0	1/1:8,1:9:18.06:364,18,0	0/1:23,0:5:9.55:10,0,24	0/0:20,0:3:3.85:0,4,18	1/1:13,10:23:46.88:865,47,0	0/0:24,0:24:71:0,71,2818	0/0:16,0:14:35.85:0,36,927	0/0:28,0:21:35.81:0,36,556	0/0:17,0:16:48.16:0,48,2226	0/0:21,0:21:60.20:0,60,3046	0/0:18,0:18:51.02:0,51,2555	1/1:14,1:15:41.73:952,42,0	1/1:15,3:17:51.17:1506,51,0	0/0:16,0:16:48.16:0,48,2328	0/0:14,0:14:39.13:0,39,2250	1/1:11,2:12:36.12:907,36,0	0/0:26,0:23:62.33:0,62,3386	1/1:10,0:9:18.06:415,18,0	0/0:19,0:14:33.10:0,33,1164	0/0:17,0:17:35.48:0,35,1730	0/0:11,0:10:30.09:0,30,1267	0/0:20,0:20:57.16:0,57,2826	0/0:12,0:12:36.12:0,36,1334	0/0:14,0:12:33.11:0,33,2136	0/0:14,0:14:36.12:0,36,1741	0/1:14,0:14:99:159,0,815	0/0:20,0:20:60.21:0,60,3037	0/1:19,0:17:73.90:74,0,341
chr10	102080997	.	TC	T	386.25	PASS	AB=0.762;AC=3;AF=0.056;AN=54;BaseQRankSum=6.187;DP=469;FS=1.537;HRun=2;HaplotypeScore=96.2732;InbreedingCoeff=0.6564;MQ=50.24;MQ0=19;MQRankSum=-3.188;QD=11.36;ReadPosRankSum=1.262;VQSLOD=2.1149;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:13.26:0,13,110	0/0:8,0:8:10.02:0,10,41	0/0:17,0:3:4.02:0,4,47	./.	0/0:22,0:22:31.05:0,31,130	0/0:23,0:23:67.10:0,67,953	0/0:13,0:11:33.09:0,33,457	0/0:32,0:25:65.76:0,66,794	0/0:18,0:17:51.14:0,51,712	0/0:20,0:20:60.20:0,60,885	0/0:20,0:20:54.13:0,54,754	0/0:14,0:14:28.43:0,28,113	0/0:17,0:16:30.85:0,31,119	0/0:17,0:17:51.13:0,51,729	0/0:14,0:14:42.14:0,42,614	0/0:13,0:12:16.73:0,17,78	0/0:26,0:23:65.22:0,65,894	0/0:10,0:9:3.07:0,3,48	0/0:17,0:14:42.06:0,42,580	0/0:15,0:15:39.08:0,39,534	0/0:12,0:10:30.09:0,30,423	0/0:19,0:19:54.18:0,54,769	0/0:13,0:13:28.22:0,28,492	0/0:15,0:13:36.11:0,36,506	0/0:13,0:13:36.12:0,36,524	0/1:11,5:16:1.01:311,0,1	0/0:21,0:21:63.21:0,63,924	1/1:16,2:16:28.61:180,29,0
chr10	102081013	.	T	TC	522.42	PASS	AB=0.869;AC=7;AF=0.135;AN=52;BaseQRankSum=4.759;DP=459;FS=4.996;HRun=2;HaplotypeScore=96.4214;InbreedingCoeff=-0.1553;MQ=51.08;MQ0=12;MQRankSum=-1.569;QD=5.28;ReadPosRankSum=-2.389;VQSLOD=-0.1953;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:11,1:12:69.83:70,0,131	0/1:6,0:6:48.35:48,0,64	./.	./.	0/1:19,0:19:18.99:19,0,165	0/0:24,0:24:69.11:0,69,844	0/0:16,0:14:42.12:0,42,530	0/0:34,0:28:78.15:0,78,975	0/0:18,0:18:54.18:0,54,701	0/0:21,0:21:63.20:0,63,808	0/0:19,0:19:57.19:0,57,740	0/1:12,2:15:99:129,0,267	0/1:15,6:20:99:198,0,262	0/0:14,0:14:42.14:0,42,545	0/0:15,0:15:45.13:0,45,570	0/1:11,2:12:92.01:92,0,189	0/0:30,0:28:81.24:0,81,1032	0/1:7,6:13:95.37:95,0,137	0/0:14,0:13:36.12:0,36,465	0/0:12,0:12:36.12:0,36,467	0/0:16,0:14:36.04:0,36,430	0/0:19,0:19:54.17:0,54,690	0/0:17,0:17:51.17:0,51,662	0/0:18,0:16:45.15:0,45,582	0/0:16,0:16:39.13:0,39,506	0/0:18,0:18:48.13:0,48,569	0/0:19,0:19:54.18:0,54,700	0/0:17,0:16:33.06:0,33,365
chr10	102082072	.	C	CT	5924.20	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-12.084;DP=698;FS=1.471;HRun=6;HaplotypeScore=66.8865;InbreedingCoeff=0.9915;MQ=85.84;MQ0=1;MQRankSum=-3.122;QD=30.23;ReadPosRankSum=3.223;VQSLOD=5.5605;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,37:40:93.30:1170,93,0	1/1:1,5:6:15.05:189,15,0	0/0:28,0:28:75.04:0,75,738	0/0:18,0:17:39.07:0,39,388	1/1:0,27:27:75.24:943,75,0	0/0:23,0:23:66.14:0,66,666	0/0:25,0:25:72.14:0,72,727	0/0:38,0:38:99:0,99,1000	0/0:25,0:25:72.11:0,72,709	0/0:26,0:26:72.15:0,72,724	0/0:19,0:19:48.10:0,48,489	1/1:3,19:22:45.14:566,45,0	1/1:3,22:25:60.19:755,60,0	0/0:27,0:27:69.15:0,69,703	0/0:28,0:28:81.17:0,81,821	1/1:0,19:19:57.18:717,57,0	0/0:32,0:32:96.21:0,96,973	1/1:1,17:18:42.13:528,42,0	0/0:24,0:24:69.11:0,69,682	0/0:25,0:25:69.14:0,69,697	0/0:33,0:33:84.13:0,84,839	0/0:30,0:30:84.17:0,84,848	0/0:18,0:18:51.08:0,51,520	0/0:37,0:37:99:0,105,1057	0/0:21,0:21:45.09:0,45,459	1/1:6,23:29:11.26:754,11,0	0/0:25,0:25:66.15:0,66,673	1/1:2,8:10:24.08:302,24,0
chr10	102082343	.	CAGAGAGAGAG	C	984.79	PASS	AB=0.914;AC=12;AF=0.222;AN=54;BaseQRankSum=5.874;DP=685;FS=31.010;HRun=0;HaplotypeScore=183.4845;InbreedingCoeff=-0.0899;MQ=77.79;MQ0=18;MQRankSum=-4.879;QD=4.50;ReadPosRankSum=-0.734;VQSLOD=1.3494;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:17.95:0,18,214	0/1:10,0:10:40.69:41,0,60	0/0:69,0:22:0:0,0,0	0/0:88,0:36:1.33:0,1,4	0/0:25,0:25:16.94:0,17,181	0/0:16,0:16:21.04:0,21,540	0/0:26,0:30:34:0,34,1040	0/1:29,0:27:29.56:34,0,30	0/0:23,0:23:18.05:0,18,483	0/0:18,0:17:33.10:0,33,619	0/0:10,0:10:8.98:0,9,96	0/1:22,0:22:80.04:80,0,179	1/1:9,0:9:2.71:53,3,0	0/0:20,0:20:27.08:0,27,833	0/0:22,0:23:12.03:0,12,415	0/1:25,0:25:99:206,0,146	0/0:24,0:26:53.96:0,54,1786	0/0:19,0:19:23.25:0,23,174	0/1:10,2:13:26.13:151,0,26	0/1:18,11:27:59.97:242,0,60	0/1:18,8:26:1.43:1,0,18	0/0:26,0:27:27.08:0,27,802	0/0:19,0:19:23.98:0,24,455	0/0:22,0:23:9.83:0,10,571	./.	0/1:26,0:26:99:174,0,138	0/1:16,4:20:39.80:80,0,40	0/1:10,0:10:34.63:63,0,35
chr10	102082380	.	AGAGAGAGAGAGC	A	1764.06	PASS	AB=0.959;AC=14;AF=0.250;AN=56;BaseQRankSum=10.143;DP=670;FS=25.511;HRun=0;HaplotypeScore=198.3415;InbreedingCoeff=0.0197;MQ=57.94;MQ0=14;MQRankSum=-0.236;QD=7.26;ReadPosRankSum=2.491;VQSLOD=1.2823;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:24:52.71:233,0,53	0/1:18,0:18:17.46:76,0,17	0/0:28,0:12:19.12:0,19,216	0/0:36,0:9:10.75:0,11,102	0/0:34,0:34:11.65:0,12,98	0/0:16,0:15:34.23:0,34,705	0/0:33,0:33:70.18:0,70,1553	0/0:35,0:30:67.29:0,67,457	0/0:26,0:25:62.67:0,63,1015	0/0:26,0:23:60.88:0,61,1068	0/0:19,0:19:29.58:0,30,521	0/1:23,0:23:99:134,0,101	1/1:8,0:8:3.44:81,3,0	0/0:21,0:21:56.88:0,57,1398	0/0:30,0:29:71.69:0,72,1001	0/1:7,0:24:53.53:306,0,54	0/0:31,0:31:81.53:0,82,2606	0/1:18,0:18:50.93:130,0,51	0/1:20,0:20:79.12:79,0,327	0/1:24,0:23:99:117,0,274	0/1:28,0:28:0.71:1,0,191	0/0:29,0:28:62.90:0,63,1718	0/0:23,0:23:48.82:0,49,876	0/0:19,0:19:40.34:0,40,1316	0/0:20,0:20:47.82:0,48,731	1/1:6,19:25:10.01:619,10,0	0/1:18,0:17:5.26:5,0,156	0/1:12,0:10:18.17:136,0,18
chr10	102082382	.	AGAGAGAGAGCGAGAGC	A	1721.10	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=7.298;DP=663;FS=10.743;HRun=0;HaplotypeScore=238.9291;InbreedingCoeff=0.5118;MQ=58.51;MQ0=13;MQRankSum=-1.797;QD=7.93;ReadPosRankSum=-0.027;VQSLOD=1.1306;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:30.61:355,31,0	1/1:5,12:17:3.90:139,4,0	0/0:25,0:12:10.45:0,10,412	0/1:34,0:11:7.12:7,0,266	1/1:11,22:33:0.40:1,0,0	0/0:16,0:15:30.99:0,31,1047	0/0:34,0:34:66.70:0,67,2256	0/0:34,0:29:77.99:0,78,1028	0/0:26,0:25:63.21:0,63,1719	0/0:26,0:23:57.66:0,58,1652	0/0:20,0:20:33.05:0,33,874	0/1:23,0:23:33.60:147,0,34	0/1:8,0:8:0.84:132,0,1	0/0:22,0:22:54.18:0,54,2034	0/0:31,0:30:65.94:0,66,1788	1/1:22,2:24:12.90:513,13,0	0/0:29,0:29:80.39:0,80,3740	1/1:18,0:18:22.73:357,23,0	0/0:20,0:20:33.65:0,34,732	0/0:24,0:23:33:0,33,759	0/0:28,0:28:29.95:0,30,635	0/0:29,0:28:60.20:0,60,2607	0/0:23,0:23:48.10:0,48,1462	0/0:20,0:20:42.14:0,42,1973	0/0:21,0:21:51.17:0,51,1452	0/1:24,0:24:99:121,0,265	0/0:18,0:17:33:0,33,446	0/1:11,0:9:98.37:116,0,98
chr10	102082384	.	AGAGAGAGCGAGAGC	A	1922.29	PASS	AB=0.857;AC=15;AF=0.268;AN=56;BaseQRankSum=7.227;DP=656;FS=11.593;HRun=0;HaplotypeScore=220.3991;InbreedingCoeff=0.6248;MQ=60.44;MQ0=11;MQRankSum=-1.749;QD=10.98;ReadPosRankSum=0.564;VQSLOD=1.3202;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:23:33.99:548,34,0	1/1:15,0:15:3.48:107,3,0	0/0:27,0:16:21.95:0,22,678	0/0:31,0:14:9.76:0,10,318	1/1:32,0:32:0.47:1,0,0	0/0:16,0:15:30.93:0,31,894	0/0:33,0:33:57.66:0,58,1861	0/0:35,0:31:83.03:0,83,981	0/0:27,0:26:63.21:0,63,1505	0/0:26,0:23:54.07:0,54,1344	0/0:18,0:18:29.93:0,30,769	1/1:6,18:24:6.49:244,6,0	0/1:2,6:8:0.57:101,0,1	0/0:21,0:21:54.18:0,54,1765	0/0:31,0:30:69.23:0,69,1532	1/1:23,0:23:12.93:421,13,0	0/0:31,0:31:81.74:0,82,3324	1/1:16,0:16:23.94:346,24,0	0/0:21,0:21:9.89:0,10,642	0/0:24,0:23:0.86:0,1,512	0/0:28,0:28:29.97:0,30,522	0/0:29,0:28:60.20:0,60,2200	0/0:23,0:23:45.02:0,45,1211	0/0:20,0:20:39.60:0,40,1633	0/0:21,0:21:51.17:0,51,1232	0/1:23,0:23:99:239,0,108	0/0:19,0:18:27.81:0,28,441	0/1:10,0:8:76.93:83,0,77
chr10	102084043	.	GAGA	G	248.52	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=4.000;DP=257;FS=22.269;HRun=0;HaplotypeScore=41.6629;InbreedingCoeff=0.6449;MQ=96.43;MQ0=3;MQRankSum=-3.771;QD=9.94;ReadPosRankSum=-1.854;VQSLOD=1.0799;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,6:9:6.02:74,6,0	1/1:1,2:3:3.01:39,3,0	0/0:38,0:21:30.23:0,30,615	0/0:25,0:19:15.55:0,16,345	./.	0/0:7,0:7:12.51:0,13,215	0/0:15,0:15:36.12:0,36,592	0/0:11,0:10:9.48:0,9,365	0/0:10,0:10:24.08:0,24,395	0/0:4,0:4:12.04:0,12,198	0/0:2,0:2:6.02:0,6,97	1/1:3,2:4:5.99:72,6,0	1/1:4,1:5:1.06:116,1,0	0/0:5,0:5:9.03:0,9,166	0/0:7,0:8:20.94:0,21,342	1/1:2,1:3:0.41:77,0,0	0/0:12,0:14:32.90:0,33,594	0/0:12,0:12:33.11:0,33,548	0/0:8,0:8:21.07:0,21,345	0/0:3,0:3:9.03:0,9,138	0/0:13,0:13:30.10:0,30,499	0/0:3,0:4:6.02:0,6,103	0/0:3,0:3:6.02:0,6,104	0/0:9,1:10:24.06:0,24,370	0/0:12,0:12:30.10:0,30,489	0/0:7,0:7:15.05:0,15,251	0/0:9,0:9:27.08:0,27,440	0/0:9,0:9:27.09:0,27,424
chr10	102084652	.	A	AT	3460.82	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-4.789;DP=551;FS=5.557;HRun=9;HaplotypeScore=55.1920;InbreedingCoeff=0.9571;MQ=76.84;MQ0=0;MQRankSum=-0.543;QD=28.14;ReadPosRankSum=0.191;VQSLOD=3.4994;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:35:87.24:962,87,0	1/1:0,9:9:24.06:266,24,0	0/0:15,0:15:2.31:0,2,204	0/0:10,0:9:17.99:0,18,155	1/1:1,20:21:57.09:606,57,0	0/0:22,0:22:53.98:0,54,468	0/0:20,0:20:50.98:0,51,443	0/0:22,0:22:56.98:0,57,495	0/0:18,0:18:53.99:0,54,469	0/0:13,0:13:32.99:0,33,286	0/0:26,0:26:68.97:0,69,595	1/1:0,15:15:42.11:465,42,0	1/1:3,15:18:22.03:458,22,0	0/0:16,0:16:41.97:0,42,360	0/0:20,0:20:47.98:0,48,417	1/1:2,23:25:43.13:704,43,0	0/0:23,0:23:62.96:0,63,541	0/0:34,0:34:92.97:0,93,807	0/0:12,1:13:32.98:0,33,285	0/0:24,0:25:65.01:0,65,552	0/0:9,0:9:20.99:0,21,182	0/0:23,0:24:68.01:0,68,578	0/0:18,1:19:20.79:0,21,405	0/0:13,0:13:35.59:0,36,312	0/0:15,0:15:35.95:0,36,308	0/0:23,0:24:58.99:0,59,497	0/0:32,0:32:65.55:0,66,715	0/0:15,0:15:41.99:0,42,365
chr10	102084847	.	AG	A	529.23	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.952;DP=533;FS=6.853;HRun=8;HaplotypeScore=60.9152;InbreedingCoeff=0.9782;MQ=75.42;MQ0=0;MQRankSum=-1.316;QD=20.35;ReadPosRankSum=0.716;VQSLOD=3.7217;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.20:0,75,879	0/0:8,0:8:21.06:0,21,253	0/0:26,0:20:13.53:0,14,394	0/0:34,0:27:52.87:0,53,500	0/0:27,0:27:63.17:0,63,747	0/0:26,0:26:69.18:0,69,798	0/0:24,0:24:63.18:0,63,748	0/0:19,0:24:36.08:0,36,411	0/0:27,0:27:72.18:0,72,835	0/0:14,0:14:30.09:0,30,361	0/0:20,0:20:57.17:0,57,686	0/0:19,0:19:54.14:0,54,628	0/0:7,0:7:18.05:0,18,216	0/0:17,0:17:42.11:0,42,484	0/0:13,0:13:39.11:0,39,460	0/0:21,0:22:63.05:0,63,725	0/0:20,0:20:51.16:0,51,615	0/0:1,0:15:31.59:0,32,160	0/0:21,0:21:45.14:0,45,541	0/0:23,0:23:57.14:0,57,651	0/0:11,0:11:30.08:0,30,350	0/0:9,0:9:21.05:0,21,243	0/0:24,0:24:63.17:0,63,737	0/0:9,0:9:27.07:0,27,315	0/0:20,0:20:48.13:0,48,567	1/1:3,15:18:45:419,45,0	0/0:17,0:17:51.16:0,51,614	1/1:0,8:8:24.04:232,24,0
chr10	102085209	.	GTCTATCTATCTA	G	4559.91	PASS	AB=0.692;AC=11;AF=0.204;AN=54;BaseQRankSum=7.383;DP=788;FS=14.357;HRun=0;HaplotypeScore=270.6552;InbreedingCoeff=0.8059;MQ=58.08;MQ0=8;MQRankSum=-10.438;QD=23.75;ReadPosRankSum=1.831;VQSLOD=2.4798;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,18:39:6.02:206,6,0	1/1:7,11:18:23.78:823,24,0	./.	0/0:28,0:21:0:0,0,0	1/1:15,17:32:15.05:515,15,0	0/0:29,0:29:48.16:0,48,2738	0/0:27,0:27:54.14:0,54,2115	0/0:40,0:40:39.27:0,39,361	0/0:30,0:30:48.16:0,48,2404	0/0:27,0:28:57.20:0,57,2794	0/0:24,0:24:45.14:0,45,2415	1/1:18,19:37:36.12:1235,36,0	1/1:16,23:39:36.12:1186,36,0	0/0:30,0:30:51.18:0,51,2437	0/0:46,0:46:75.26:0,75,3911	0/1:15,12:27:99:596,0,133	0/0:26,0:26:39.13:0,39,2175	0/0:8,0:16:21.07:0,21,531	0/0:21,0:22:15.05:0,15,375	0/0:10,0:24:36.11:0,36,896	0/0:7,0:22:27.09:0,27,674	0/0:24,0:24:45.15:0,45,1964	0/0:24,0:24:33.11:0,33,1630	0/0:35,0:37:75.24:0,75,3488	0/0:38,0:39:72.25:0,72,3671	0/0:7,0:17:38.71:0,39,963	0/0:15,0:27:29.92:0,30,739	0/0:3,0:7:6.02:0,6,154
chr10	102085834	.	AC	A	2302.66	PASS	AB=0.899;AC=20;AF=0.357;AN=56;BaseQRankSum=4.425;DP=576;FS=3.969;HRun=10;HaplotypeScore=82.8410;InbreedingCoeff=0.5937;MQ=78.53;MQ0=0;MQRankSum=-0.247;QD=8.82;ReadPosRankSum=3.478;VQSLOD=2.5408;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:28:34.73:0,35,211	0/0:7,0:7:14.68:0,15,92	0/0:22,0:22:1.41:0,1,238	0/1:22,1:22:25.57:26,0,92	0/0:7,0:14:11.54:0,12,68	0/0:21,1:22:25.07:0,25,496	0/0:27,2:29:31.08:0,31,556	1/1:8,12:20:32.98:287,33,0	0/1:17,3:20:24.07:24,0,422	0/0:24,1:25:34.07:0,34,586	0/0:13,1:14:1.03:0,1,239	0/0:3,0:11:5.72:0,6,29	0/0:8,0:21:8.61:0,9,45	0/0:18,0:18:48.08:0,48,509	0/0:21,0:21:48.05:0,48,493	0/0:5,0:19:22.77:0,23,113	0/0:8,0:28:54.63:0,55,338	1/1:1,1:14:25.19:91,25,0	1/1:1,9:12:31.07:246,31,0	1/1:5,12:18:38.01:318,38,0	1/1:6,26:34:76.04:637,76,0	0/0:23,0:23:30.08:0,30,332	0/1:20,3:22:27.01:27,0,400	0/1:26,4:30:37.97:38,0,516	0/0:13,0:13:27.07:0,27,297	1/1:6,0:35:57.49:169,57,0	1/1:2,22:25:71.02:605,71,0	1/1:0,0:7:12.22:36,12,0
chr10	102086050	.	T	TCACCCCTCCGAAACCCTGAGCCAAGA	44158.11	PASS	AB=0.755;AC=54;AF=0.964;AN=56;BaseQRankSum=-3.718;DP=294;FS=13.363;HRun=0;HaplotypeScore=332.5164;InbreedingCoeff=-0.0634;MQ=64.82;MQ0=1;MQRankSum=-2.089;QD=150.20;ReadPosRankSum=4.126;VQSLOD=3.4159;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:23.85:1686,24,0	1/1:5,0:5:15.05:1013,15,0	0/1:7,1:9:66.36:1026,0,66	0/1:5,0:9:20.07:1040,0,20	1/1:17,0:17:21.42:2204,21,0	1/1:8,0:9:21.07:1275,21,0	1/1:10,0:10:30.10:1945,30,0	1/1:5,0:5:15.05:624,15,0	1/1:14,0:15:34.97:1809,35,0	1/1:8,0:8:21.54:1041,22,0	1/1:8,0:8:0.40:1015,0,0	1/1:11,0:11:21.07:1796,21,0	1/1:15,0:15:26.60:2240,27,0	1/1:12,0:11:23.82:1288,24,0	1/1:12,0:12:36.12:3332,36,0	1/1:11,0:11:27.09:2128,27,0	1/1:8,0:8:18.06:1294,18,0	1/1:8,0:9:18.06:1328,18,0	1/1:3,0:3:9.02:350,9,0	1/1:21,0:21:49.40:2768,49,0	1/1:10,0:10:15.01:563,15,0	1/1:8,0:8:18.02:1336,18,0	1/1:11,0:10:25.02:1545,25,0	1/1:5,0:6:5.80:381,6,0	1/1:22,0:23:29.99:3797,30,0	1/1:15,0:16:39.44:2687,39,0	1/1:11,0:11:14.41:2437,14,0	1/1:1,0:1:3.01:210,3,0
chr10	102086278	.	GATGATGAT	G	1222.29	PASS	AB=1.000;AC=12;AF=0.231;AN=52;BaseQRankSum=8.130;DP=469;FS=7.115;HRun=0;HaplotypeScore=113.0068;InbreedingCoeff=0.6118;MQ=47.45;MQ0=16;MQRankSum=-5.718;QD=12.35;ReadPosRankSum=-0.728;VQSLOD=1.7368;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:11:8.76:59,9,0	./.	0/0:16,0:12:33.21:0,33,852	0/0:16,0:7:21.07:0,21,611	./.	0/0:25,0:23:33.11:0,33,1163	0/0:9,0:9:24.08:0,24,845	0/0:40,0:40:99:0,107,3269	0/0:13,0:12:24.08:0,24,756	0/0:19,0:17:45.15:0,45,1513	0/0:15,0:15:8.82:0,9,253	1/1:13,0:13:6.02:157,6,0	1/1:8,0:8:3.01:79,3,0	0/0:18,0:17:15.03:0,15,468	0/0:11,0:10:27.09:0,27,944	1/1:11,0:10:3.01:79,3,0	0/0:16,0:14:29.61:0,30,942	1/1:19,0:18:1.99:213,2,0	0/0:11,0:10:30.10:0,30,942	0/0:19,0:19:42.14:0,42,1254	0/0:21,0:21:52.55:0,53,1769	0/0:25,0:24:24.07:0,24,771	0/0:12,0:11:18.06:0,18,590	0/0:20,0:18:30.10:0,30,1009	0/0:25,0:25:45.15:0,45,1518	0/1:21,0:21:39.84:668,0,40	0/0:24,0:23:48.16:0,48,1455	0/1:13,0:12:6.27:114,0,6
chr10	102086279	.	ATGAT	A	1688.45	PASS	AB=0.574;AC=12;AF=0.231;AN=52;BaseQRankSum=7.386;DP=463;FS=6.010;HRun=0;HaplotypeScore=88.2179;InbreedingCoeff=0.7181;MQ=47.54;MQ0=12;MQRankSum=-5.665;QD=17.23;ReadPosRankSum=0.152;VQSLOD=2.8908;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:6,8:11:0:0,0,0	./.	0/0:16,0:12:35.27:0,35,634	0/0:16,0:7:21.07:0,21,412	./.	0/0:23,0:22:33.11:0,33,914	0/0:9,0:9:24.08:0,24,652	0/0:40,0:40:94.41:0,94,2361	0/0:13,0:12:24.08:0,24,578	0/0:18,0:17:47.11:0,47,1224	0/0:15,0:15:8.71:0,9,191	1/1:0,13:13:6.02:121,6,0	1/1:1,7:8:3.01:61,3,0	0/0:17,0:16:17.93:0,18,446	0/0:11,0:10:27.09:0,27,740	1/1:1,10:10:3.01:61,3,0	0/0:16,0:14:25.17:0,25,709	1/1:1,16:18:18.06:344,18,0	0/0:12,0:11:33.11:0,33,755	0/0:19,0:19:42.14:0,42,938	0/0:21,0:21:53.39:0,53,1331	0/0:25,0:25:24.08:0,24,593	0/0:12,0:11:18.06:0,18,455	0/0:19,0:18:30.10:0,30,798	0/0:24,0:24:45.14:0,45,1196	0/1:1,20:21:17.10:1065,0,17	0/0:24,0:23:48.12:0,48,1146	1/1:2,11:12:9.50:185,10,0
chr10	102089106	.	A	ATT	6214.50	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=17.066;DP=771;FS=10.285;HRun=1;HaplotypeScore=134.2097;InbreedingCoeff=0.9855;MQ=63.89;MQ0=1;MQRankSum=-16.417;QD=35.51;ReadPosRankSum=1.498;VQSLOD=4.1848;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:14.63:204,15,0	1/1:0,11:12:30.10:545,30,0	0/0:42,0:38:99:0,102,1422	0/0:37,0:30:84.21:0,84,1155	1/1:2,27:29:65.92:943,66,0	0/0:27,0:27:75.22:0,75,1101	0/0:20,0:20:60.19:0,60,892	0/0:30,0:30:89.79:0,90,1340	0/0:26,0:26:78.24:0,78,1168	0/0:27,0:27:81.26:0,81,1204	0/0:32,0:32:96.31:0,96,1444	1/1:1,27:28:66.12:1147,66,0	1/1:3,22:25:66.19:1158,66,0	0/0:31,0:31:93.32:0,93,1414	0/0:35,0:35:99:0,105,1583	1/1:0,26:26:60.17:1062,60,0	0/0:25,0:25:69.01:0,69,1002	1/1:1,4:5:9.03:166,9,0	0/0:21,0:21:51.13:0,51,701	0/0:30,0:30:90.29:0,90,1353	0/0:48,0:48:99:0,138,2048	0/0:36,0:36:99:0,105,1542	0/0:35,0:35:96.31:0,96,1445	0/0:39,0:39:99:0,114,1725	0/0:25,0:25:72.24:0,72,1103	1/1:2,18:20:50.99:748,51,0	0/0:29,0:29:84.28:0,84,1280	1/1:0,7:7:15.02:241,15,0
chr10	102091288	.	AACACACACACAC	A	972.15	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=4.266;DP=467;FS=19.207;HRun=0;HaplotypeScore=148.9842;InbreedingCoeff=0.6816;MQ=66.09;MQ0=4;MQRankSum=-3.707;QD=11.17;ReadPosRankSum=-0.016;VQSLOD=1.1823;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,12:35:6.02:206,6,0	0/0:5,0:5:0.89:0,1,2	./.	./.	1/1:12,4:16:6.42:122,6,0	0/0:11,0:10:9.03:0,9,521	0/0:11,0:12:9.92:0,10,310	0/0:16,0:16:6.02:0,6,238	0/0:7,0:9:15.05:0,15,576	0/0:16,0:16:30.10:0,30,1406	0/0:10,0:10:9.03:0,9,258	1/1:9,7:16:14.88:515,15,0	1/1:9,0:10:2.75:83,3,0	0/0:15,0:15:6.02:0,6,330	0/0:11,0:9:12.04:0,12,500	1/1:9,0:10:6.02:187,6,0	0/0:18,0:20:18.53:0,19,747	0/0:19,0:19:36.59:0,37,1898	0/0:14,0:14:3.48:0,3,124	0/0:13,0:13:15.05:0,15,455	0/0:31,0:31:54.19:0,54,2780	0/0:19,0:19:42.14:0,42,1923	0/0:22,0:22:42.13:0,42,1982	0/0:17,0:17:27.09:0,27,1399	0/0:20,0:21:39.13:0,39,1827	0/0:20,0:20:43.96:0,44,2015	0/0:10,0:9:3.01:0,3,139	0/0:6,0:6:15.05:0,15,712
chr10	102091501	.	C	CCA	617.05	PASS	AB=0.938;AC=21;AF=0.500;AN=42;BaseQRankSum=-3.798;DP=530;FS=2.689;HRun=0;HaplotypeScore=85.2845;InbreedingCoeff=0.1232;MQ=67.90;MQ0=22;MQRankSum=3.606;QD=2.30;ReadPosRankSum=-0.503;VQSLOD=1.7148;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:3,0:9:2.84:0,3,14	./.	0/1:36,0:21:0:0,0,0	./.	0/1:17,0:16:23.01:27,0,23	1/1:23,0:22:3.01:37,3,0	./.	0/1:12,6:17:25.79:38,0,26	1/1:14,0:14:0.47:1,0,0	0/1:12,0:11:22.79:55,0,23	0/1:10,0:14:1.57:2,0,31	0/0:10,0:12:5.06:0,5,21	0/1:18,0:18:22.81:38,0,23	1/1:21,1:22:9.03:128,9,0	0/0:11,0:11:5.64:0,6,27	0/1:17,4:22:22.86:52,0,23	0/0:14,0:15:5.65:0,6,28	./.	./.	./.	1/1:15,0:15:12:112,12,0	1/1:10,0:10:2.65:25,3,0	1/1:26,6:32:14.61:200,15,0	1/1:14,0:14:3.01:33,3,0	0/0:13,0:15:2.84:0,3,14	0/0:13,0:17:11.36:0,11,56	0/0:8,0:9:2.84:0,3,14
chr10	102091756	.	GTGT	G	186.29	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.490;DP=534;FS=1.461;HRun=0;HaplotypeScore=98.3766;InbreedingCoeff=0.9923;MQ=88.73;MQ0=0;MQRankSum=-4.472;QD=20.70;ReadPosRankSum=-0.141;VQSLOD=3.5872;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.15:0,45,1109	0/0:12,0:12:36.12:0,36,887	0/0:22,0:22:63.22:0,63,1521	0/0:20,0:20:60.21:0,60,1421	0/0:19,0:19:57.20:0,57,1404	0/0:39,0:39:99:0,114,2810	0/0:15,0:15:45.15:0,45,1109	0/0:33,0:33:96.27:0,96,2203	0/0:14,0:14:42.13:0,42,986	0/0:22,0:22:60.21:0,60,1472	0/0:9,0:9:27.09:0,27,666	0/0:16,0:16:45.15:0,45,1109	0/0:17,0:17:51.17:0,51,1220	0/0:19,0:19:54.19:0,54,1330	0/0:24,0:24:72.25:0,72,1761	0/0:9,0:9:27.09:0,27,630	0/0:29,0:29:87.30:0,87,2104	1/1:3,6:9:21.04:278,21,0	0/0:23,0:23:69.22:0,69,1643	0/0:24,0:24:69.24:0,69,1653	0/0:15,0:15:39.13:0,39,893	0/0:12,0:12:36.12:0,36,887	0/0:11,0:11:33.11:0,33,782	0/0:20,0:20:57.20:0,57,1379	0/0:25,0:25:75.25:0,75,1793	0/0:27,0:27:81.28:0,81,1971	0/0:24,0:24:63.22:0,63,1498	0/0:9,0:9:27.09:0,27,665
chr10	102091766	.	A	ATAC	266.11	PASS	AB=0.647;AC=1;AF=0.018;AN=56;BaseQRankSum=4.201;DP=529;FS=0.000;HRun=0;HaplotypeScore=103.9498;InbreedingCoeff=0.4437;MQ=83.60;MQ0=0;MQRankSum=-4.126;QD=24.19;ReadPosRankSum=0.049;VQSLOD=3.4278;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.16:0,54,974	0/0:13,0:13:39.13:0,39,727	0/0:16,0:16:45.14:0,45,787	0/0:18,0:18:54.15:0,54,866	0/0:18,0:18:54.17:0,54,975	0/0:39,0:39:99:0,114,2123	0/0:17,0:17:51.17:0,51,908	0/0:31,0:31:93.32:0,93,1714	0/0:15,0:15:45.14:0,45,793	0/0:19,0:19:57.20:0,57,1048	0/0:10,0:10:30.10:0,30,545	0/0:15,0:15:42.13:0,42,753	0/0:17,0:17:51.16:0,51,920	0/0:21,0:21:63.22:0,63,1169	0/0:22,0:22:66.23:0,66,1230	0/0:9,0:9:27.09:0,27,503	0/0:27,0:27:78.23:0,78,1403	0/1:5,6:11:3.73:341,0,4	0/0:19,0:19:57.18:0,57,1016	0/0:27,0:27:78.27:0,78,1438	0/0:12,0:12:30.10:0,30,558	0/0:12,0:12:36.12:0,36,671	0/0:13,0:13:39.13:0,39,724	0/0:22,0:22:57.15:0,57,1027	0/0:23,0:23:66.21:0,66,1171	0/0:27,0:27:81.28:0,81,1510	0/0:26,0:26:72.25:0,72,1330	0/0:11,0:11:33.11:0,33,615
chr10	102091782	.	T	TA	5360.67	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=0.701;DP=531;FS=0.000;HRun=9;HaplotypeScore=76.3083;InbreedingCoeff=0.9888;MQ=75.15;MQ0=0;MQRankSum=-0.776;QD=23.21;ReadPosRankSum=-3.299;VQSLOD=4.1812;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:26:36.95:619,37,0	1/1:3,8:11:21.06:232,21,0	0/0:11,0:11:14.50:0,14,110	0/0:9,0:9:14.93:0,15,118	1/1:5,17:22:59.85:572,60,0	0/0:37,0:37:86.96:0,87,755	0/0:13,0:13:35.97:0,36,307	1/1:4,16:20:48.11:520,48,0	0/0:18,0:18:47.98:0,48,416	0/0:22,0:22:53.98:0,54,468	0/0:9,0:9:26.99:0,27,233	1/1:3,13:16:33.09:365,33,0	1/1:3,12:15:36.10:398,36,0	0/0:17,0:17:44.99:0,45,390	0/0:25,0:25:68.98:0,69,599	1/1:1,9:10:24.06:266,24,0	0/0:23,0:23:59.97:0,60,521	1/1:6,0:13:11.36:58,11,0	1/1:5,16:21:48.06:498,48,0	1/1:4,27:31:76.29:773,76,0	1/1:1,16:17:30.08:332,30,0	0/0:15,0:15:26.94:0,27,234	0/0:16,0:16:38.95:0,39,335	0/0:23,0:23:56.99:0,57,495	0/0:20,0:20:53.96:0,54,463	0/0:30,0:30:71.96:0,72,622	1/1:3,26:28:66.18:727,66,0	0/0:12,0:12:26.99:0,27,234
chr10	102093612	.	AT	A	4430.66	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.666;DP=517;FS=6.816;HRun=5;HaplotypeScore=48.5626;InbreedingCoeff=0.9982;MQ=79.61;MQ0=0;MQRankSum=-2.530;QD=30.35;ReadPosRankSum=1.758;VQSLOD=5.3028;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:27:69.20:782,69,0	1/1:1,12:13:33.09:374,33,0	0/0:10,0:10:27.08:0,27,352	0/0:14,0:14:36.12:0,36,472	1/1:2,23:25:69.08:752,69,0	0/0:13,0:13:39.09:0,39,485	0/0:13,0:13:39.11:0,39,516	0/0:31,0:31:93.30:0,93,1260	0/0:17,0:17:51.17:0,51,697	0/0:27,0:27:75.25:0,75,1025	0/0:16,0:16:42.13:0,42,558	1/1:0,16:16:45.13:510,45,0	1/1:0,20:20:51.15:578,51,0	0/0:15,0:15:33.11:0,33,451	0/0:22,0:22:63.21:0,63,861	1/1:0,14:14:39.11:442,39,0	0/0:21,0:21:63.21:0,63,857	0/0:21,0:21:63.21:0,63,860	0/0:22,0:22:60.15:0,60,761	0/0:24,0:24:66.20:0,66,872	0/0:6,0:6:18.06:0,18,242	0/0:17,0:17:48.14:0,48,628	0/0:18,0:18:51.16:0,51,681	0/0:22,0:22:66.18:0,66,866	0/0:20,0:20:57.16:0,57,737	1/1:0,20:20:60.13:652,60,0	0/0:22,0:22:66.22:0,66,902	1/1:0,11:11:30.09:340,30,0
chr10	102093926	.	A	ATGTG	6896.51	PASS	AB=0.962;AC=18;AF=0.321;AN=56;BaseQRankSum=-5.339;DP=938;FS=4.517;HRun=0;HaplotypeScore=182.6937;InbreedingCoeff=0.8551;MQ=62.46;MQ0=14;MQRankSum=-0.433;QD=22.32;ReadPosRankSum=-0.726;VQSLOD=4.2042;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,16:50:32.27:1382,32,0	1/1:8,6:15:15.98:462,16,0	0/0:37,0:25:14.46:0,14,114	0/0:44,0:21:9.70:0,10,172	1/1:6,15:25:20.33:511,20,0	0/0:32,0:32:74.96:0,75,1145	0/0:36,0:37:66.07:0,66,952	0/1:46,0:44:8.46:8,0,715	0/0:39,0:41:39.24:0,39,1084	0/0:39,0:41:59.41:0,59,1244	0/0:17,0:18:39.13:0,39,604	1/1:8,19:30:34.06:680,34,0	1/1:12,22:36:39.75:892,40,0	0/0:29,0:29:72.50:0,73,1113	0/0:26,0:28:62.93:0,63,942	1/1:10,30:42:53.22:1130,53,0	0/0:34,0:36:75.26:0,75,1093	0/1:16,0:16:3.11:128,0,3	0/0:23,0:21:26.09:0,26,370	0/0:26,0:25:50.89:0,51,762	0/0:56,0:53:86.03:0,86,1529	0/0:36,0:36:78.23:0,78,1204	0/0:25,0:25:54.16:0,54,834	0/0:50,0:51:99:0,101,1599	0/0:24,0:25:63.17:0,63,927	1/1:10,23:34:71.72:1532,72,0	0/0:38,0:42:86.85:0,87,1389	1/1:1,6:11:11.51:171,12,0
chr10	102093970	.	ATG	A	358.77	PASS	AB=0.655;AC=1;AF=0.018;AN=56;BaseQRankSum=5.351;DP=987;FS=0.879;HRun=0;HaplotypeScore=165.2872;InbreedingCoeff=-0.0244;MQ=53.64;MQ0=30;MQRankSum=-2.152;QD=18.88;ReadPosRankSum=-0.808;VQSLOD=3.7439;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:87.63:0,88,1690	0/0:12,0:12:30.09:0,30,488	0/0:25,0:2:3.01:0,3,52	0/0:46,0:13:36.07:0,36,560	0/0:27,0:27:49.81:0,50,861	0/0:34,0:34:90.28:0,90,1481	0/0:35,0:34:75.13:0,75,1255	0/0:53,0:44:99:0,108,1732	0/0:42,0:42:99:0,111,1801	0/0:49,0:49:99:0,138,2346	0/0:20,0:20:54.18:0,54,916	0/0:37,0:37:72.91:0,73,1185	0/0:45,0:45:99:0,102,1691	0/0:35,0:35:93.28:0,93,1516	0/0:39,0:38:93.28:0,93,1553	0/0:40,0:40:89.30:0,89,1503	0/0:36,0:36:93.91:0,94,1505	0/1:9,10:18:51.33:433,0,51	0/0:32,0:20:42.08:0,42,632	0/0:27,0:26:78.27:0,78,1333	0/0:76,1:75:99:0,125,3021	0/0:29,0:29:84.28:0,84,1394	0/0:24,0:24:66.19:0,66,1064	0/0:46,0:46:99:0,105,1704	0/0:25,0:25:63.20:0,63,1053	0/0:30,0:29:84.28:0,84,1425	0/0:42,0:41:99:0,99,1927	0/0:14,0:14:33.11:0,33,536
chr10	102094145	.	T	TTG	466.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.243;DP=1336;FS=0.875;HRun=0;HaplotypeScore=180.5228;InbreedingCoeff=0.9977;MQ=54.84;MQ0=17;MQRankSum=-0.938;QD=17.27;ReadPosRankSum=-1.345;VQSLOD=3.3548;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,126,1387	0/0:10,0:10:24.08:0,24,311	0/0:52,0:23:43.80:0,44,418	0/0:57,0:21:39.10:0,39,509	0/0:31,0:31:87.20:0,87,1095	0/0:33,0:33:96.01:0,96,1194	0/0:38,0:38:93.60:0,94,1096	0/0:65,0:59:99:0,129,1559	0/0:71,0:71:99:0,180,2193	0/0:57,0:57:99:0,141,1761	0/0:27,0:27:72.16:0,72,886	0/0:67,0:67:99:0,168,2134	0/0:56,0:56:99:0,142,1782	0/0:70,0:70:99:0,198,2443	0/0:65,0:65:99:0,168,2080	0/0:66,0:66:99:0,165,2074	0/0:38,0:38:85.50:0,86,1146	1/1:6,19:26:35.91:561,36,0	0/0:38,0:32:64.43:0,64,748	0/0:46,0:44:99:0,117,1414	0/0:100,0:97:99:0,221,2681	0/0:47,0:47:95.30:0,95,1331	0/0:31,0:31:78.24:0,78,994	0/0:67,0:67:99:0,129,1881	0/0:25,0:25:49.71:0,50,840	0/0:43,0:43:99:0,105,1344	0/0:38,0:38:93.28:0,93,1181	0/0:20,0:20:45.12:0,45,567
chr10	102094249	.	TTGTG	T	2700.78	PASS	AB=0.654;AC=9;AF=0.161;AN=56;BaseQRankSum=8.984;DP=1291;FS=31.856;HRun=0;HaplotypeScore=305.9186;InbreedingCoeff=0.5115;MQ=49.87;MQ0=47;MQRankSum=-5.880;QD=11.44;ReadPosRankSum=-3.223;VQSLOD=1.8010;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:32,12:44:81.08:258,0,81	0/1:4,11:14:31.25:152,0,31	0/0:56,0:10:18.03:0,18,345	0/0:60,0:7:12:0,12,215	1/1:4,13:17:2.24:45,2,0	0/0:24,0:24:66.18:0,66,1505	0/0:48,0:48:99:0,126,2924	0/0:82,0:71:99:0,156,3512	0/0:61,0:61:99:0,160,3782	0/0:56,0:54:99:0,145,3630	0/0:19,0:19:54.14:0,54,1350	0/1:18,36:54:36.91:462,0,37	1/1:16,40:56:77.91:1238,78,0	0/0:60,0:59:99:0,163,4125	0/0:54,0:54:99:0,144,3561	1/1:16,34:50:12.64:694,13,0	0/0:54,0:54:99:0,141,3196	0/0:37,0:37:95.10:0,95,2614	0/0:34,0:24:63.21:0,63,1517	0/0:28,0:28:81.28:0,81,1971	0/0:133,0:130:99:0,333,7946	0/0:40,0:40:99:0,111,2710	0/0:29,0:29:78.27:0,78,1919	0/0:66,0:66:99:0,159,3894	0/0:29,0:29:81.28:0,81,2034	0/0:54,0:53:99:0,138,2245	0/0:27,0:27:75.24:0,75,1893	0/0:4,0:4:9.02:0,9,102
chr10	102094259	.	GCA	G	347.22	PASS	AB=0.978;AC=9;AF=0.161;AN=56;BaseQRankSum=12.354;DP=1225;FS=25.627;HRun=0;HaplotypeScore=272.0698;InbreedingCoeff=0.5803;MQ=50.14;MQ0=34;MQRankSum=-8.456;QD=1.52;ReadPosRankSum=-3.127;VQSLOD=0.8885;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,3:43:17.40:17,0,32	0/1:15,0:14:0.16:20,0,0	0/0:47,1:7:20.81:0,21,324	0/0:55,0:7:20.70:0,21,304	1/1:18,0:18:2.88:16,3,0	0/0:22,0:22:63.16:0,63,1107	0/0:44,0:44:99:0,129,2486	0/0:69,1:66:99:0,155,3589	0/0:56,2:60:99:0,118,3065	0/0:54,0:52:99:0,129,2980	0/0:18,0:18:54.14:0,54,1043	0/1:52,0:52:71.22:110,0,71	1/1:50,0:50:52.75:253,53,0	0/0:59,0:58:99:0,169,3288	0/0:51,0:51:99:0,153,2935	1/1:50,0:50:6.87:73,7,0	0/0:52,2:54:99:0,99,2609	0/0:38,0:38:81.11:0,81,2040	0/0:28,0:22:63.11:0,63,1183	0/0:28,0:28:84.27:0,84,1587	0/0:126,1:125:99:0,275,6267	0/0:37,0:37:99:0,108,2059	0/0:26,0:26:78.25:0,78,1491	0/0:69,0:70:99:0,176,3224	0/0:30,0:30:84.27:0,84,1673	0/0:45,0:44:99:0,124,1358	0/0:27,0:27:81.26:0,81,1557	0/0:5,0:5:5.96:0,6,43
chr10	102094265	.	GTGTGTT	G	3183.51	PASS	AB=0.970;AC=10;AF=0.179;AN=56;BaseQRankSum=13.397;DP=1230;FS=1.738;HRun=0;HaplotypeScore=336.7907;InbreedingCoeff=0.5454;MQ=50.76;MQ0=36;MQRankSum=-9.946;QD=13.10;ReadPosRankSum=-1.185;VQSLOD=1.3659;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:7.60:0,8,112	0/1:14,1:14:24.32:56,0,24	0/0:56,0:11:27.05:0,27,631	0/0:55,0:7:18.06:0,18,437	0/1:20,0:20:0.76:5,0,1	0/0:22,0:22:59.18:0,59,1680	0/0:42,0:42:99:0,111,3541	0/0:71,0:68:99:0,184,5418	0/0:55,0:55:99:0,127,4318	0/0:60,0:57:99:0,165,5160	0/0:18,0:18:51.12:0,51,1623	0/1:55,1:56:73.44:190,0,73	1/1:49,2:51:50.83:482,51,0	0/0:62,0:61:99:0,171,5357	0/0:52,0:52:99:0,153,4711	0/1:48,2:50:14.96:238,0,15	0/0:51,0:51:99:0,113,3679	0/0:37,0:37:92.68:0,93,3317	0/0:31,0:24:52.57:0,53,1395	0/0:27,0:27:75.25:0,75,2471	0/0:130,0:128:99:0,338,9989	0/0:35,0:35:92.10:0,92,2800	0/0:25,0:25:69.23:0,69,2217	0/0:62,0:62:99:0,161,4735	0/0:28,0:28:80.95:0,81,2489	1/1:3,42:44:20.98:2229,21,0	0/0:28,0:28:81.23:0,81,2244	1/1:0,6:6:6.02:138,6,0
chr10	102094267	.	GTGTT	G	3734.64	PASS	AB=0.573;AC=11;AF=0.196;AN=56;BaseQRankSum=13.494;DP=1222;FS=1.713;HRun=0;HaplotypeScore=294.2513;InbreedingCoeff=0.4940;MQ=50.91;MQ0=36;MQRankSum=-9.020;QD=13.39;ReadPosRankSum=-0.825;VQSLOD=2.4621;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,19:41:78.19:198,0,78	0/1:5,10:14:14.58:231,0,15	0/0:54,0:10:15.01:0,15,460	0/0:55,0:9:19.64:0,20,409	0/1:1,19:20:0.66:5,0,1	0/0:20,0:20:59.10:0,59,1346	0/0:41,0:41:99:0,114,2797	0/0:68,0:66:99:0,189,4305	0/0:56,0:56:99:0,138,3428	0/0:62,0:59:99:0,171,4056	0/0:18,0:18:51.12:0,51,1260	0/1:6,47:54:51.61:553,0,52	1/1:10,41:51:54.78:983,55,0	0/0:61,0:60:99:0,171,4169	0/0:54,0:54:99:0,162,3788	0/1:6,42:48:8.65:607,0,9	0/0:53,0:53:99:0,120,2942	0/0:37,0:37:99:0,108,2656	0/0:29,0:23:54.11:0,54,1130	0/0:26,0:26:75.25:0,75,1927	0/0:130,0:128:99:0,347,7924	0/0:36,0:36:98.11:0,98,2283	0/0:25,0:25:72.22:0,72,1732	0/0:63,0:63:99:0,161,3747	0/0:27,0:27:80.07:0,80,1947	1/1:44,0:43:45:1095,45,0	0/0:27,0:27:81.21:0,81,1741	1/1:6,0:6:6.02:63,6,0
chr10	102095242	.	G	GT	5084.36	PASS	AB=0.961;AC=49;AF=0.875;AN=56;BaseQRankSum=2.146;DP=520;FS=8.289;HRun=11;HaplotypeScore=108.3868;InbreedingCoeff=0.4343;MQ=63.09;MQ0=4;MQRankSum=-2.364;QD=10.64;ReadPosRankSum=-1.868;VQSLOD=3.3354;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:18:31.37:204,31,0	1/1:10,0:10:23.16:153,23,0	0/1:23,1:11:28.60:47,0,29	0/1:20,1:10:5.67:6,0,39	1/1:20,0:20:38.13:235,38,0	1/1:11,9:20:33.37:313,33,0	1/1:3,7:10:17.86:161,18,0	1/1:25,1:31:36.75:279,37,0	1/1:10,5:15:23.96:222,24,0	0/0:20,0:20:38.73:0,39,297	0/0:21,1:22:17.35:0,17,317	1/1:18,1:19:23.90:173,24,0	1/1:15,0:15:33.27:193,33,0	1/1:4,5:9:23.96:228,24,0	1/1:7,9:16:28.44:262,28,0	1/1:18,0:18:36.86:220,37,0	1/1:12,23:35:51.08:510,51,0	1/1:26,0:26:29.57:284,30,0	1/1:12,0:15:23.48:111,23,0	1/1:11,0:18:37.30:206,37,0	1/1:2,1:5:5.85:45,6,0	1/1:4,7:11:21.50:207,21,0	1/1:7,7:14:2.35:185,2,0	1/1:3,9:12:15.03:152,15,0	1/1:16,14:31:1.88:345,2,0	0/1:30,1:31:83.40:119,0,83	1/1:16,0:17:33.16:184,33,0	1/1:4,0:14:5.84:42,6,0
chr10	102095250	.	T	TGTT	289.29	PASS	AB=0.783;AC=12;AF=0.214;AN=56;BaseQRankSum=7.390;DP=538;FS=13.311;HRun=0;HaplotypeScore=129.5894;InbreedingCoeff=0.1217;MQ=57.92;MQ0=12;MQRankSum=-2.699;QD=1.49;ReadPosRankSum=5.001;VQSLOD=1.2805;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:19:17.44:17,0,30	0/1:4,0:12:15.47:34,0,15	0/0:32,0:12:13.06:0,13,236	0/1:20,0:8:22.45:22,0,111	1/1:6,0:20:14.28:107,14,0	0/0:20,0:20:54.48:0,54,323	0/0:12,0:11:19.89:0,20,123	0/1:30,0:29:41.85:42,0,192	0/0:15,0:14:32.98:0,33,201	0/0:18,0:18:51.11:0,51,730	0/0:23,0:23:62.84:0,63,836	1/1:5,1:20:11.33:93,11,0	0/0:6,0:16:1.64:0,2,58	0/0:12,0:12:24.34:0,24,133	0/0:16,0:16:15.73:0,16,157	0/1:4,0:16:10.69:83,0,11	0/0:34,0:34:69.97:0,70,396	0/1:5,0:27:21.14:21,0,57	0/1:18,0:16:11.57:12,0,59	0/0:19,0:18:9.17:0,9,110	0/0:4,0:4:4.59:0,5,21	0/0:13,0:13:32.85:0,33,182	0/0:17,0:17:32.63:0,33,223	0/0:10,0:10:16.99:0,17,91	0/0:29,0:29:44.77:0,45,422	0/0:32,0:32:21.78:0,22,527	0/0:21,0:21:20.77:0,21,177	0/1:9,0:9:11.33:14,0,11
chr10	102095263	.	T	TTTG	1952.77	PASS	AB=0.996;AC=21;AF=0.375;AN=56;BaseQRankSum=2.678;DP=576;FS=1.792;HRun=0;HaplotypeScore=127.4614;InbreedingCoeff=0.3816;MQ=58.06;MQ0=15;MQRankSum=-3.064;QD=6.40;ReadPosRankSum=1.008;VQSLOD=2.8320;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,1:21:5.03:285,5,0	1/1:11,1:12:29.04:275,29,0	0/0:51,0:14:11.80:0,12,174	0/1:32,0:9:25.22:25,0,40	1/1:22,1:23:31.62:305,32,0	0/0:17,0:17:48.34:0,48,294	0/0:13,0:12:24.63:0,25,140	0/1:27,0:26:40.61:41,0,121	0/0:13,0:12:2.67:0,3,125	0/0:22,0:22:40.26:0,40,404	0/0:23,0:23:37.76:0,38,322	1/1:24,0:23:24.26:290,24,0	1/1:10,2:12:9.58:231,10,0	0/0:14,0:14:15.48:0,15,166	0/0:16,0:16:27.96:0,28,222	1/1:15,1:16:9.71:299,10,0	0/0:35,0:35:37.32:0,37,331	0/1:29,0:29:28.99:29,0,30	0/1:22,0:20:22.88:23,0,78	0/1:20,0:19:13.75:14,0,63	0/0:5,0:5:5.59:0,6,25	0/0:8,0:8:17.66:0,18,119	0/0:17,0:17:21.52:0,22,318	0/0:11,0:11:16.86:0,17,123	0/0:26,0:26:34.46:0,34,348	0/1:33,0:33:43.71:247,0,44	0/1:22,0:21:9.54:10,0,113	1/1:10,0:10:8.61:70,9,0
chr10	102095264	.	T	TTG	1446.27	PASS	AB=0.960;AC=16;AF=0.286;AN=56;BaseQRankSum=4.689;DP=576;FS=6.845;HRun=0;HaplotypeScore=119.3445;InbreedingCoeff=0.0409;MQ=59.76;MQ0=17;MQRankSum=-4.935;QD=5.04;ReadPosRankSum=3.006;VQSLOD=2.4185;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,1:20:2.57:231,0,3	1/1:9,3:12:7.83:244,8,0	0/0:56,0:16:21.97:0,22,232	0/1:32,0:9:1.56:2,0,42	0/1:21,1:22:38.36:191,0,38	0/0:17,0:17:40.41:0,40,296	0/0:13,0:12:26.09:0,26,177	0/1:25,1:25:24.81:25,0,186	0/0:12,1:12:33.68:0,34,187	0/0:23,0:23:36.94:0,37,499	0/0:23,0:23:9.06:0,9,353	0/1:21,3:23:16.95:219,0,17	0/1:11,1:12:0.58:177,0,1	0/0:14,0:14:33.01:0,33,271	0/0:15,0:16:28.48:0,28,257	0/1:16,1:17:22.34:257,0,22	0/0:34,0:34:71.74:0,72,504	0/1:27,0:28:62.92:63,0,80	0/1:20,1:19:3.08:3,0,151	0/1:20,0:19:10.05:10,0,65	0/0:5,0:5:5.78:0,6,28	0/1:8,0:8:9.25:9,0,86	0/0:17,0:17:37.02:0,37,384	0/0:10,0:10:16.85:0,17,133	0/0:26,0:26:19.01:0,19,441	0/1:33,0:33:51.60:130,0,52	0/0:22,0:21:23.56:0,24,185	1/1:10,0:10:5.74:42,6,0
chr10	102095266	.	T	TTTTTTTG	1710.26	PASS	AB=0.935;AC=8;AF=0.143;AN=56;BaseQRankSum=0.614;DP=580;FS=50.467;HRun=0;HaplotypeScore=174.3106;InbreedingCoeff=0.0241;MQ=59.57;MQ0=17;MQRankSum=-2.164;QD=10.37;ReadPosRankSum=3.112;VQSLOD=1.2712;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:20:36.67:37,0,305	0/0:11,0:11:23.37:0,23,267	0/0:60,0:16:10.03:0,10,274	0/1:37,0:10:37.98:39,0,38	0/0:22,0:22:0.48:0,0,209	0/0:18,0:18:47.50:0,48,453	0/0:12,0:11:22.97:0,23,277	0/0:25,0:24:56.49:0,56,613	0/0:13,0:12:25.95:0,26,293	0/0:24,0:24:58.63:0,59,656	0/0:22,0:22:50.98:0,51,581	0/1:24,0:23:61.81:62,0,180	0/1:12,0:12:24.46:24,0,128	0/0:14,0:14:31.98:0,32,313	0/0:16,0:16:35.50:0,36,349	0/0:17,0:17:28.98:0,29,281	0/0:32,0:32:49.76:0,50,610	0/1:27,0:27:53.07:259,0,53	0/0:21,0:19:40.15:0,40,490	0/0:21,0:20:38.95:0,39,393	0/0:5,0:5:8.19:0,8,53	0/0:8,0:8:20.91:0,21,243	0/0:17,0:17:44.70:0,45,617	0/0:10,0:10:16.15:0,16,135	0/0:25,0:25:58.69:0,59,796	0/1:12,16:34:66.73:1319,0,67	0/0:22,0:21:42.66:0,43,459	1/1:10,0:10:4.23:104,4,0
chr10	102095593	.	TC	T	448.32	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.308;DP=575;FS=0.000;HRun=7;HaplotypeScore=67.3431;InbreedingCoeff=0.9945;MQ=83.45;MQ0=3;MQRankSum=0.026;QD=22.42;ReadPosRankSum=0.487;VQSLOD=3.3715;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.21:0,69,851	0/0:7,0:7:21:0,21,241	0/0:45,1:33:31.62:0,32,580	0/0:41,1:33:45.66:0,46,565	0/0:17,0:17:39:0,39,431	0/0:26,0:26:78.19:0,78,921	0/0:19,0:19:54.11:0,54,622	0/0:34,0:34:81.21:0,81,942	0/0:21,0:21:63.19:0,63,775	0/0:19,0:19:57.17:0,57,689	0/0:17,0:17:48.15:0,48,601	0/0:16,0:16:45.12:0,45,538	0/0:21,0:21:60.14:0,60,696	0/0:11,0:11:30.08:0,30,361	0/0:22,0:22:63.16:0,63,750	0/0:23,0:23:60.13:0,60,688	0/0:24,0:24:63.17:0,63,762	0/0:28,0:28:81.17:0,81,992	0/0:20,0:20:36.62:0,37,613	0/0:16,0:16:42.07:0,42,506	0/0:10,0:10:30.10:0,30,375	0/0:10,0:10:30.05:0,30,325	0/0:12,0:12:36.10:0,36,432	0/0:19,0:19:54.06:0,54,594	0/0:19,0:19:54.16:0,54,662	1/1:0,13:13:36.06:356,36,0	0/0:27,0:27:75.17:0,75,872	1/1:0,7:7:21.04:213,21,0
chr10	102095979	.	AG	A	2983.81	PASS	AB=0.775;AC=52;AF=0.929;AN=56;BaseQRankSum=-3.281;DP=169;FS=6.963;HRun=6;HaplotypeScore=74.8259;InbreedingCoeff=0.1871;MQ=80.98;MQ0=0;MQRankSum=-5.204;QD=18.53;ReadPosRankSum=3.005;VQSLOD=3.1585;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,5:8:11.93:123,12,0	1/1:0,2:2:6.01:63,6,0	0/0:8,0:8:8.45:0,8,108	0/1:9,3:11:10.12:10,0,90	1/1:2,9:11:14.97:152,15,0	1/1:0,2:2:6.01:63,6,0	1/1:1,8:9:21.04:212,21,0	1/1:3,12:15:39.04:389,39,0	1/1:0,7:7:21.04:211,21,0	1/1:5,8:13:21.01:215,21,0	1/1:0,2:2:3.01:31,3,0	1/1:1,5:6:15:137,15,0	0/1:2,1:3:7.81:25,0,8	1/1:0,2:2:6.01:61,6,0	1/1:2,4:6:15.01:142,15,0	1/1:1,1:2:6.01:61,6,0	1/1:0,4:4:12.02:121,12,0	1/1:1,2:3:9.02:94,9,0	1/1:5,4:9:18.03:182,18,0	1/1:1,6:7:12.03:124,12,0	1/1:2,4:6:3:31,3,0	1/1:2,5:7:12.03:124,12,0	1/1:2,2:4:2.49:20,2,0	1/1:2,6:8:17.95:171,18,0	1/1:0,2:2:6.01:62,6,0	1/1:2,1:3:3:32,3,0	1/1:0,4:4:12.02:119,12,0	1/1:0,4:4:12.02:122,12,0
chr10	102095988	.	GC	G	4326.63	PASS	AB=1.000;AC=54;AF=0.964;AN=56;BaseQRankSum=-5.069;DP=150;FS=1.302;HRun=1;HaplotypeScore=73.8213;InbreedingCoeff=-0.0898;MQ=80.68;MQ0=0;MQRankSum=-5.060;QD=28.84;ReadPosRankSum=1.158;VQSLOD=4.6699;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:6:14.95:189,15,0	1/1:0,2:2:6.02:76,6,0	0/1:7,0:7:27.47:27,0,109	0/1:12,0:11:60.87:61,0,62	1/1:0,10:10:14.98:185,15,0	1/1:0,3:3:9.03:115,9,0	1/1:1,8:9:24.08:303,24,0	1/1:1,16:17:51.16:641,51,0	1/1:0,8:8:24.08:297,24,0	1/1:1,7:8:18.06:229,18,0	1/1:0,1:2:3.01:38,3,0	1/1:1,4:5:12.04:150,12,0	1/1:0,2:2:6.02:72,6,0	1/1:0,3:3:9.03:114,9,0	1/1:0,4:4:12.04:152,12,0	1/1:0,1:1:3.01:38,3,0	1/1:0,4:4:12.04:149,12,0	1/1:0,4:4:9.03:114,9,0	1/1:0,5:5:15.05:187,15,0	1/1:0,6:6:17.99:208,18,0	1/1:1,3:4:6:62,6,0	1/1:0,5:5:9.03:111,9,0	1/1:0,3:3:9.02:104,9,0	1/1:1,7:8:21.06:250,21,0	1/1:0,2:2:6.02:76,6,0	1/1:0,2:2:6.02:77,6,0	1/1:0,4:4:12.04:153,12,0	1/1:0,3:4:12.04:149,12,0
chr10	102095989	.	CG	C	4345.55	PASS	AB=0.838;AC=54;AF=0.964;AN=56;BaseQRankSum=-5.069;DP=147;FS=1.302;HRun=2;HaplotypeScore=72.8609;InbreedingCoeff=-0.0901;MQ=81.05;MQ0=0;MQRankSum=-5.113;QD=29.56;ReadPosRankSum=1.088;VQSLOD=4.5052;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:14.91:189,15,0	1/1:2,0:2:6.02:76,6,0	0/1:6,1:7:29.84:30,0,111	0/1:9,3:11:49.04:61,0,49	1/1:10,0:10:14.98:185,15,0	1/1:3,0:3:9.03:115,9,0	1/1:8,0:8:24.08:303,24,0	1/1:17,0:17:51.16:641,51,0	1/1:8,0:8:24.08:297,24,0	1/1:7,0:7:18.06:229,18,0	1/1:2,0:2:3.01:38,3,0	1/1:4,0:4:12.04:150,12,0	1/1:2,0:2:6.02:77,6,0	1/1:3,0:3:9.03:114,9,0	1/1:4,0:4:12.04:152,12,0	1/1:1,0:1:3.01:38,3,0	1/1:4,0:4:12.04:149,12,0	1/1:4,0:4:9.03:114,9,0	1/1:5,0:5:15.05:187,15,0	1/1:6,0:6:17.99:208,18,0	1/1:3,1:4:6.01:72,6,0	1/1:5,0:5:9.03:111,9,0	1/1:3,0:3:9.02:104,9,0	1/1:8,0:8:20.95:250,21,0	1/1:2,0:2:6.02:76,6,0	1/1:2,0:2:6.02:77,6,0	1/1:4,0:4:12.04:153,12,0	1/1:4,0:4:12.04:149,12,0
chr10	102095990	.	GCGAA	G	3346.99	PASS	AB=0.974;AC=53;AF=0.946;AN=56;BaseQRankSum=-0.611;DP=150;FS=10.616;HRun=0;HaplotypeScore=84.9554;InbreedingCoeff=-0.0592;MQ=81.13;MQ0=0;MQRankSum=-4.375;QD=22.31;ReadPosRankSum=4.315;VQSLOD=2.6751;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:14.25:147,14,0	1/1:2,0:2:6.01:62,6,0	0/1:8,0:8:7.73:8,0,152	0/1:11,0:11:55.98:56,0,73	1/1:10,0:10:5.10:137,5,0	1/1:3,0:3:8.24:73,8,0	1/1:8,0:8:22.30:210,22,0	1/1:16,1:17:50.82:512,51,0	1/1:8,0:8:21.50:218,22,0	1/1:7,0:7:18.05:219,18,0	1/1:1,1:2:2.59:28,3,0	1/1:4,0:4:12:110,12,0	1/1:2,0:2:5.38:38,5,0	1/1:3,0:3:8.37:61,8,0	1/1:4,0:4:12.01:117,12,0	1/1:1,0:1:3.01:30,3,0	1/1:4,0:4:12.02:120,12,0	1/1:4,0:4:6.80:102,7,0	1/1:5,0:5:15.05:202,15,0	1/1:6,0:6:11.78:131,12,0	0/1:4,0:4:0.14:39,0,0	1/1:5,0:5:2.74:83,3,0	1/1:4,0:4:7.57:75,8,0	1/1:8,1:9:19.59:203,20,0	1/1:2,0:2:6.01:60,6,0	1/1:2,0:2:5.91:38,6,0	1/1:4,0:4:12.02:119,12,0	1/1:3,1:4:12.03:151,12,0
chr10	102096183	.	T	TTTTTTTCA	4435.09	PASS	AB=0.810;AC=16;AF=0.286;AN=56;BaseQRankSum=6.272;DP=427;FS=1.186;HRun=0;HaplotypeScore=106.4659;InbreedingCoeff=0.8028;MQ=57.17;MQ0=39;MQRankSum=-4.220;QD=39.25;ReadPosRankSum=-2.096;VQSLOD=4.3554;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,6:16:17.93:122,0,18	1/1:4,0:3:9.03:311,9,0	0/0:29,0:12:36.09:0,36,717	0/0:40,0:16:44.82:0,45,1022	1/1:20,0:16:44.86:1069,45,0	0/0:19,0:16:33.09:0,33,852	0/0:21,0:19:35.88:0,36,818	0/0:31,0:31:73.92:0,74,1595	0/0:15,0:14:23.90:0,24,536	0/0:16,0:16:45.11:0,45,1111	0/0:9,0:9:24.07:0,24,536	1/1:9,0:8:17.33:385,17,0	1/1:9,0:9:26.28:527,26,0	0/0:12,0:12:33.11:0,33,890	0/0:4,0:4:9.03:0,9,249	1/1:9,0:8:14.62:328,15,0	0/0:15,0:13:20.42:0,20,486	1/1:19,2:20:49.78:1106,50,0	0/0:21,0:21:41.92:0,42,1169	0/0:13,0:11:22.97:0,23,538	0/0:17,0:11:21.04:0,21,468	0/0:12,0:12:20.86:0,21,548	0/0:7,0:6:6.49:0,6,158	0/0:15,0:14:36.12:0,36,936	0/0:11,0:11:20.90:0,21,541	0/1:11,0:11:1.55:449,0,2	0/0:7,0:7:21.07:0,21,554	1/1:6,0:2:6.02:139,6,0
chr10	102096343	.	AGCT	A	989.79	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.146;DP=482;FS=4.255;HRun=0;HaplotypeScore=67.9833;InbreedingCoeff=0.9587;MQ=88.81;MQ0=0;MQRankSum=-3.136;QD=36.66;ReadPosRankSum=0.047;VQSLOD=4.0701;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,105,2314	0/0:5,0:5:15.05:0,15,320	0/0:25,0:25:69.22:0,69,1378	0/0:15,0:15:42.09:0,42,803	0/0:12,0:12:36.12:0,36,763	0/0:25,0:25:75.24:0,75,1558	0/0:25,0:25:66.21:0,66,1416	0/0:23,0:23:66.23:0,66,1447	0/0:13,0:13:39.13:0,39,860	0/0:21,0:21:63.22:0,63,1391	0/0:9,0:9:18.06:0,18,345	0/0:16,0:16:45.15:0,45,992	0/0:18,0:18:54.19:0,54,1168	0/0:18,0:18:54.19:0,54,1176	0/0:8,0:8:21.07:0,21,464	0/0:8,0:8:21.07:0,21,463	0/0:24,0:24:69.24:0,69,1501	0/0:18,0:18:54.19:0,54,1173	0/0:12,0:12:27.09:0,27,556	0/0:7,0:7:12.04:0,12,265	0/0:25,0:25:69.22:0,69,1442	0/0:9,0:9:24.08:0,24,511	0/0:16,0:16:45.15:0,45,974	0/0:25,0:25:69.24:0,69,1520	0/0:15,0:15:42.14:0,42,926	1/1:3,18:21:54.18:867,54,0	0/0:24,0:23:66.23:0,66,1454	1/1:0,6:6:15.05:241,15,0
chr10	102096469	.	TC	T	1876	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=10.597;DP=438;FS=0.000;HRun=10;HaplotypeScore=50.8039;InbreedingCoeff=0.8565;MQ=78.90;MQ0=2;MQRankSum=-1.916;QD=14.00;ReadPosRankSum=3.510;VQSLOD=3.3974;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,23:38:38.55:489,39,0	1/1:1,9:10:22.97:180,23,0	0/0:18,0:17:32.22:0,32,365	0/1:9,0:9:32.92:33,0,55	1/1:6,14:20:50.93:431,51,0	0/0:14,0:14:27.07:0,27,299	0/0:24,0:24:48.12:0,48,523	0/0:28,0:29:39.09:0,39,424	0/0:14,0:14:30.07:0,30,323	0/0:7,0:7:21.05:0,21,227	0/0:4,0:4:3.01:0,3,33	1/1:3,12:15:44.99:390,45,0	1/1:1,15:16:35.99:312,36,0	0/0:14,0:14:42.11:0,42,464	0/0:16,0:16:36.10:0,36,398	1/1:1,5:6:15:130,15,0	0/0:19,1:20:19.05:0,19,429	1/1:1,0:19:36.67:108,37,0	0/0:13,0:13:24.03:0,24,246	0/0:11,0:11:24.03:0,24,248	0/0:24,0:24:45.01:0,45,469	0/0:16,0:16:36.10:0,36,398	0/0:12,0:12:30.08:0,30,332	0/0:19,0:20:50.97:0,51,545	0/0:14,0:14:21.03:0,21,215	0/0:18,0:18:33.05:0,33,335	0/0:13,0:13:33.09:0,33,365	0/0:3,0:3:6.02:0,6,66
chr10	102097209	.	AG	A	3742.83	PASS	AB=0.571;AC=17;AF=0.304;AN=56;BaseQRankSum=11.470;DP=632;FS=3.628;HRun=9;HaplotypeScore=63.1344;InbreedingCoeff=0.9545;MQ=85.54;MQ0=0;MQRankSum=-3.249;QD=21.89;ReadPosRankSum=4.576;VQSLOD=4.4642;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,36:40:98.14:904,98,0	1/1:1,7:8:21.01:192,21,0	0/0:26,0:26:45.58:0,46,533	0/0:24,0:24:54.06:0,54,578	1/1:4,18:22:25.54:437,26,0	0/0:24,0:24:60.17:0,60,680	0/0:11,0:11:27.06:0,27,301	0/0:30,0:31:57.14:0,57,632	0/0:19,0:19:48.13:0,48,543	0/0:30,0:30:53.99:0,54,858	0/0:38,0:38:99:0,99,1116	1/1:2,13:15:33.02:302,33,0	1/1:1,18:19:45.02:412,45,0	0/0:17,1:18:45.13:0,45,519	0/0:33,1:34:63.35:0,63,896	1/1:1,15:16:45.02:412,45,0	0/0:27,0:27:72.21:0,72,830	1/1:0,16:16:42.02:384,42,0	0/0:19,1:21:19.62:0,20,502	0/0:32,0:32:72.20:0,72,820	0/0:8,0:8:24.07:0,24,277	0/0:29,0:29:84.21:0,84,937	0/0:16,0:16:42.11:0,42,473	0/0:23,0:23:66.10:0,66,723	0/0:27,0:27:57.17:0,57,658	0/1:7,21:28:0.20:508,0,0	0/0:23,0:23:51.14:0,51,579	1/1:0,7:7:21.01:192,21,0
chr10	102097601	.	CAG	C	213	PASS	AB=0.908;AC=4;AF=0.071;AN=56;BaseQRankSum=6.560;DP=677;FS=0.599;HRun=0;HaplotypeScore=113.5920;InbreedingCoeff=0.3539;MQ=63.86;MQ0=14;MQRankSum=-1.777;QD=2.96;ReadPosRankSum=0.087;VQSLOD=2.3837;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:12.73:0,13,306	0/0:9,0:9:8.04:0,8,84	0/0:40,0:26:77.89:0,78,811	0/0:43,0:22:46.27:0,46,521	0/0:21,0:21:29.96:0,30,301	0/0:18,0:18:28.63:0,29,432	0/0:16,1:17:1.80:0,2,488	0/1:33,6:39:99:158,0,681	0/0:14,0:14:20.78:0,21,436	0/0:23,0:23:31.43:0,31,751	0/0:30,0:30:70.62:0,71,1019	0/0:21,0:21:26.69:0,27,244	0/0:20,0:20:20.98:0,21,182	0/0:28,0:28:43.55:0,44,1083	0/0:23,0:23:53.74:0,54,973	0/0:24,0:24:24.03:0,24,245	0/0:29,0:29:37.96:0,38,887	1/1:14,0:14:16.99:136,17,0	0/1:18,1:19:31.78:32,0,387	0/0:28,1:28:64.51:0,65,594	0/0:28,0:27:36.01:0,36,398	0/0:17,0:17:48.11:0,48,788	0/0:27,0:27:56.85:0,57,956	0/0:29,0:29:78.16:0,78,1193	0/0:25,0:25:62.40:0,62,985	0/0:19,0:19:41.06:0,41,420	0/0:28,0:28:42.06:0,42,609	0/0:7,0:7:5.98:0,6,54
chr10	102097627	.	C	CACACAT	979.50	PASS	AB=0.948;AC=11;AF=0.196;AN=56;BaseQRankSum=8.906;DP=688;FS=18.143;HRun=0;HaplotypeScore=156.6141;InbreedingCoeff=0.0884;MQ=52.33;MQ0=25;MQRankSum=-6.745;QD=5.47;ReadPosRankSum=0.406;VQSLOD=1.3999;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:39:80.55:81,0,172	1/1:7,0:7:7.84:132,8,0	0/0:23,0:5:3.01:0,3,40	0/0:36,0:5:2.11:0,2,30	0/1:22,0:21:54.89:69,0,55	0/0:16,0:16:32.94:0,33,557	0/0:19,0:16:27.03:0,27,543	0/0:50,0:47:85.25:0,85,895	0/0:13,0:13:36.04:0,36,556	0/0:31,0:31:84.06:0,84,1325	0/0:21,0:20:54.14:0,54,1013	0/1:17,0:17:77.33:121,0,77	0/1:16,0:16:38.91:57,0,39	0/0:30,0:30:87.20:0,87,1605	0/0:24,0:23:66.02:0,66,1121	0/1:28,0:28:96.97:146,0,97	0/0:31,0:31:62.91:0,63,1184	0/1:9,11:21:60.27:92,0,60	0/0:18,0:17:35.74:0,36,312	0/0:27,0:26:46.67:0,47,322	0/0:38,0:37:52.60:0,53,481	0/0:19,0:19:51.10:0,51,941	0/0:22,0:22:48.15:0,48,998	0/0:34,0:34:92.75:0,93,1526	0/0:25,0:25:63.13:0,63,1135	0/1:22,0:21:99:368,0,151	0/0:30,0:30:55.18:0,55,424	1/1:6,0:6:3.01:60,3,0
chr10	102098687	.	CACAGAGACAGACACAA	C	1989.07	PASS	AB=0.908;AC=9;AF=0.161;AN=56;BaseQRankSum=8.539;DP=830;FS=23.988;HRun=0;HaplotypeScore=327.1276;InbreedingCoeff=0.2635;MQ=53.55;MQ0=16;MQRankSum=-3.422;QD=16.04;ReadPosRankSum=-3.520;VQSLOD=0.6242;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:39:99:190,0,336	0/1:6,0:6:43.60:52,0,44	0/0:53,0:15:29.64:0,30,513	0/0:66,0:28:17.32:0,17,634	0/0:14,0:13:2.07:0,2,5	0/0:39,0:38:99:0,105,4934	0/0:34,0:33:92.13:0,92,3844	0/0:31,0:31:90.29:0,90,2248	0/0:31,0:31:87.23:0,87,3632	0/0:33,0:33:65.27:0,65,3421	0/0:13,0:13:33.03:0,33,1120	0/1:12,0:11:67.18:67,0,114	0/0:9,0:7:8.39:0,8,82	0/0:31,0:31:81.17:0,81,3443	0/0:46,0:46:99:0,132,4912	0/1:17,0:17:99:151,0,203	0/0:40,0:40:99:0,114,4397	1/1:19,0:18:33.36:489,33,0	0/0:19,0:14:42.13:0,42,2073	0/0:28,0:28:75.23:0,75,3182	0/0:40,0:39:99:0,105,4565	0/0:39,0:39:99:0,102,4024	0/0:20,0:20:49.72:0,50,1935	0/0:72,0:71:99:0,170,9328	0/0:21,0:21:57.20:0,57,3033	0/1:4,22:25:60.12:1105,0,60	0/0:26,0:26:72.17:0,72,2995	1/1:2,0:2:3.01:79,3,0
chr10	102098773	.	A	AAC	1175.66	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=6.775;DP=992;FS=0.000;HRun=0;HaplotypeScore=181.6479;InbreedingCoeff=0.6233;MQ=56.07;MQ0=24;MQRankSum=-3.275;QD=11.53;ReadPosRankSum=2.857;VQSLOD=3.1634;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:76,0:75:99:0,153,1986	0/0:8,0:8:24.01:0,24,265	0/0:48,0:16:32.90:0,33,355	0/1:69,0:27:9.54:10,0,334	0/0:18,0:18:42.13:0,42,558	0/0:30,0:30:72.22:0,72,940	0/0:37,0:37:99:0,102,1340	0/0:41,0:36:78.23:0,78,998	0/0:31,0:31:69.13:0,69,877	0/0:31,0:31:84.21:0,84,1069	0/0:25,0:25:59.57:0,60,729	0/0:35,0:35:74.53:0,75,931	0/0:26,0:25:45.10:0,45,580	0/0:30,0:30:81.23:0,81,1035	0/0:42,0:42:99:0,99,1298	0/0:21,0:21:42.09:0,42,514	0/0:39,0:39:99:0,108,1383	1/1:11,21:31:75.26:1268,75,0	0/0:39,0:30:83.75:0,84,1065	0/0:17,0:17:48.13:0,48,610	0/0:96,0:93:99:0,226,2961	0/0:27,0:27:60.12:0,60,759	0/0:30,0:30:77.71:0,78,986	0/0:64,0:63:99:0,153,1995	0/0:19,0:19:51.13:0,51,659	0/0:35,0:33:67.71:0,68,1083	0/0:19,0:19:42.14:0,42,558	0/0:5,0:3:6.02:0,6,80
chr10	102098896	.	CAG	C	627.28	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.119;DP=879;FS=3.986;HRun=0;HaplotypeScore=145.8262;InbreedingCoeff=0.9820;MQ=63.42;MQ0=13;MQRankSum=-0.646;QD=20.91;ReadPosRankSum=-0.797;VQSLOD=3.6338;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:72.23:0,72,1141	0/0:11,0:11:27.09:0,27,450	0/0:50,0:19:38.07:0,38,498	0/0:75,0:35:47.94:0,48,575	0/0:14,0:14:33.58:0,34,529	0/0:28,0:28:75.12:0,75,1220	0/0:36,0:36:84.16:0,84,1244	0/0:35,0:34:90.20:0,90,1262	0/0:29,0:29:69.22:0,69,1134	0/0:43,0:43:99:0,117,1848	0/0:22,0:21:30.09:0,30,477	0/0:21,0:21:45.14:0,45,725	0/0:17,0:17:30.93:0,31,651	0/0:20,0:20:54.15:0,54,864	0/0:32,0:32:93.30:0,93,1539	0/0:20,0:20:45.11:0,45,705	0/0:45,0:44:99:0,108,1741	1/1:4,25:29:33.97:722,34,0	0/0:29,0:27:72.13:0,72,1066	0/0:35,1:36:60.33:0,60,1537	0/0:60,0:59:99:0,123,1996	0/0:36,0:36:90.24:0,90,1409	0/0:30,0:29:66.21:0,66,1090	0/0:36,0:36:87.25:0,87,1392	0/0:21,0:21:54.15:0,54,840	0/0:31,1:32:42.53:0,43,1250	0/0:25,0:25:72.22:0,72,1186	0/0:7,0:7:15.03:0,15,227
chr10	102105935	.	T	TG	528.27	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.600;DP=641;FS=3.829;HRun=0;HaplotypeScore=59.9586;InbreedingCoeff=0.9950;MQ=88.38;MQ0=0;MQRankSum=-3.137;QD=37.73;ReadPosRankSum=-0.524;VQSLOD=3.3966;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1367	0/0:10,0:10:30.10:0,30,419	0/0:27,0:27:75.25:0,75,1047	0/0:20,0:20:57.12:0,57,728	0/0:24,0:24:72.23:0,72,989	0/0:25,0:25:72.24:0,72,1006	0/0:33,0:33:99:0,99,1366	0/0:39,0:39:99:0,114,1593	0/0:23,0:23:69.23:0,69,965	0/0:31,0:31:87.29:0,87,1217	0/0:26,0:26:78.26:0,78,1091	0/0:23,0:23:63.21:0,63,881	0/0:25,0:25:75.23:0,75,1029	0/0:19,0:19:57.19:0,57,793	0/0:21,0:21:60.20:0,60,839	0/0:27,0:27:81.27:0,81,1131	0/0:33,0:33:96.32:0,96,1337	1/1:0,14:14:39.13:623,39,0	0/0:12,0:12:33.11:0,33,462	0/0:16,0:16:48.16:0,48,671	0/0:14,0:14:36.12:0,36,504	0/0:21,0:21:60.14:0,60,787	0/0:18,0:18:54.18:0,54,755	0/0:22,0:22:63.21:0,63,881	0/0:23,0:23:69.23:0,69,965	0/0:31,0:31:93.30:0,93,1273	0/0:23,0:23:69.15:0,69,918	0/0:8,0:8:21.07:0,21,294
chr10	102106101	.	AACACACAC	A	479.50	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=3.345;DP=468;FS=7.417;HRun=0;HaplotypeScore=112.9236;InbreedingCoeff=0.6520;MQ=73.14;MQ0=10;MQRankSum=-1.625;QD=4.48;ReadPosRankSum=1.152;VQSLOD=1.7185;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:3.01:74,3,0	1/1:6,0:6:6:63,6,0	0/0:24,0:17:0:0,0,0	./.	1/1:12,8:20:3.42:21,3,0	0/0:20,0:25:39.13:0,39,872	0/0:16,0:19:12.04:0,12,401	0/0:20,0:20:13.21:0,13,147	0/0:11,0:13:12.04:0,12,309	0/0:11,0:10:6.02:0,6,124	0/0:9,0:9:6.02:0,6,121	1/1:15,2:18:9.03:188,9,0	1/1:8,2:11:6.02:130,6,0	0/0:13,0:14:24.55:0,25,721	0/0:11,0:12:15.03:0,15,342	1/1:11,3:14:6.02:149,6,0	0/0:15,0:16:24.02:0,24,521	0/0:14,0:16:15.03:0,15,317	0/1:15,0:15:3.29:3,0,202	0/0:13,0:12:3.01:0,3,122	0/0:24,0:21:30.10:0,30,662	0/0:10,0:10:12.04:0,12,380	0/0:14,0:15:15.05:0,15,475	0/0:25,0:25:27.54:0,28,855	0/0:19,0:19:14.25:0,14,673	0/0:18,0:18:18.06:0,18,454	0/0:15,0:16:18.06:0,18,514	0/0:7,0:11:18.06:0,18,602
chr10	102106659	.	A	AT	13542.30	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-9.633;DP=649;FS=2.649;HRun=9;HaplotypeScore=61.7432;InbreedingCoeff=0.9633;MQ=82.47;MQ0=0;MQRankSum=-5.682;QD=24.44;ReadPosRankSum=2.575;VQSLOD=5.8228;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:31:68.85:720,69,0	1/1:0,11:11:30.08:332,30,0	0/0:20,0:21:32:0,32,322	0/0:13,0:16:24.04:0,24,165	1/1:5,27:32:35.08:830,35,0	1/1:3,31:34:90.24:995,90,0	1/1:3,17:20:51.14:564,51,0	1/1:11,18:30:33.88:561,34,0	1/1:3,20:23:57.15:631,57,0	0/0:31,0:31:83.98:0,84,729	0/0:27,0:27:74.98:0,75,648	1/1:3,14:17:42.11:463,42,0	1/1:3,16:19:25.08:505,25,0	1/1:4,19:23:5.04:512,5,0	1/1:4,18:22:51.14:564,51,0	1/1:5,21:26:60.16:664,60,0	1/1:0,16:17:41.95:446,42,0	1/1:5,19:24:51.14:564,51,0	1/1:4,21:25:59.97:628,60,0	1/1:2,18:20:54.11:585,54,0	1/1:7,19:26:39.11:431,39,0	1/1:3,18:21:51.14:564,51,0	1/1:2,16:19:44.95:479,45,0	1/1:2,24:26:69.19:763,69,0	1/1:8,22:31:66.01:711,66,0	1/1:3,0:19:43.20:219,43,0	1/1:8,22:31:66.01:711,66,0	1/1:0,0:7:19.92:100,20,0
chr10	102108008	.	C	CA	3869.17	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=6.284;DP=705;FS=0.378;HRun=10;HaplotypeScore=130.2969;InbreedingCoeff=0.8626;MQ=61.96;MQ0=2;MQRankSum=0.617;QD=15.00;ReadPosRankSum=0.874;VQSLOD=2.8334;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,29:41:84.61:1050,85,0	1/1:3,9:13:29.91:302,30,0	0/0:14,0:8:5.93:0,6,41	0/0:9,0:4:5.75:0,6,31	1/1:6,28:35:50.33:710,50,0	0/1:19,0:19:12.60:13,0,252	0/0:21,0:21:33.76:0,34,266	0/0:5,0:23:36.44:0,36,104	0/0:30,0:30:39.59:0,40,383	0/0:28,0:28:30.04:0,30,390	0/0:20,2:22:23.44:0,23,375	1/1:12,7:21:15.88:297,16,0	1/1:8,23:33:48.04:446,48,0	0/0:27,0:27:26.79:0,27,221	0/0:31,0:31:13.03:0,13,259	1/1:5,17:23:20.31:406,20,0	0/0:32,0:32:59.81:0,60,492	1/1:10,22:33:12.22:296,12,0	0/0:10,0:23:30.53:0,31,88	0/0:6,0:28:25.10:0,25,76	0/0:10,0:12:6.29:0,6,20	0/0:22,0:22:32.90:0,33,271	0/0:29,0:29:15.94:0,16,334	0/0:30,1:31:21.88:0,22,386	0/0:25,0:25:35.81:0,36,293	1/1:19,0:27:47.32:242,47,0	0/0:14,0:38:27.83:0,28,82	1/1:5,1:10:18.52:109,19,0
chr10	102108026	.	CA	C	820.61	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=7.718;DP=690;FS=12.043;HRun=9;HaplotypeScore=110.8382;InbreedingCoeff=0.8865;MQ=57.59;MQ0=11;MQRankSum=-2.646;QD=8.73;ReadPosRankSum=-1.335;VQSLOD=0.7168;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:90.10:0,90,608	0/0:17,0:17:35.61:0,36,210	0/0:20,0:9:9.09:0,9,76	0/1:17,0:7:0.39:0,0,52	0/0:30,0:29:58.83:0,59,387	0/0:17,0:17:45.42:0,45,487	0/0:13,0:13:24.66:0,25,299	0/0:31,0:30:54.98:0,55,592	0/0:28,0:28:60.18:0,60,688	0/0:24,0:24:60.65:0,61,691	0/0:20,0:20:51.15:0,51,587	0/0:19,0:19:39.46:0,39,273	0/0:28,0:28:42.98:0,43,297	0/0:21,0:21:51.15:0,51,578	0/0:28,0:28:74.52:0,75,811	0/0:21,0:21:43.05:0,43,243	0/0:33,0:33:95.02:0,95,1034	1/1:33,4:37:24.01:329,24,0	0/0:23,0:19:44.92:0,45,489	0/0:26,0:26:64.06:0,64,717	0/0:10,0:8:19.87:0,20,210	0/0:19,0:19:21.19:0,21,439	0/0:25,0:25:63.19:0,63,723	0/0:30,0:30:72.06:0,72,767	0/0:24,0:24:31.53:0,32,605	1/1:13,17:27:51.50:483,51,0	0/0:40,0:40:84.17:0,84,943	1/1:6,4:10:22.21:149,22,0
chr10	102108035	.	AC	A	755.82	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.298;DP=686;FS=6.617;HRun=1;HaplotypeScore=107.7143;InbreedingCoeff=0.8801;MQ=57.49;MQ0=11;MQRankSum=-0.846;QD=9.57;ReadPosRankSum=-2.043;VQSLOD=0.4566;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,130,1138	0/0:16,0:16:46.67:0,47,395	0/0:23,0:9:0.04:0,0,58	0/0:16,2:6:7.36:0,7,39	0/0:34,0:33:79.10:0,79,665	0/0:18,0:18:21.38:0,21,397	0/0:15,0:15:18.90:0,19,309	0/0:26,0:25:21.07:0,21,502	0/0:23,0:23:63.30:0,63,594	0/0:24,0:24:65.88:0,66,640	0/0:22,0:22:66.04:0,66,645	0/0:17,0:17:28.26:0,28,357	0/0:24,0:24:50.85:0,51,446	0/0:21,0:21:49.29:0,49,486	0/0:28,0:28:64.82:0,65,688	0/0:20,0:20:53.83:0,54,471	0/0:35,0:35:74.64:0,75,851	1/1:39,0:39:56.45:300,56,0	0/0:23,0:19:16.89:0,17,366	0/0:25,0:25:46.52:0,47,648	0/0:12,0:10:28.82:0,29,261	0/0:21,0:21:43.65:0,44,490	0/0:26,0:26:71.12:0,71,682	0/0:26,0:26:63.17:0,63,627	0/0:25,0:25:60.74:0,61,613	1/1:29,2:28:72.11:419,72,0	0/0:37,0:37:86.14:0,86,869	1/1:5,4:9:24.36:178,24,0
chr10	102108036	.	C	CA	303.36	PASS	AB=0.987;AC=8;AF=0.143;AN=56;BaseQRankSum=5.904;DP=685;FS=5.169;HRun=11;HaplotypeScore=108.7203;InbreedingCoeff=0.1561;MQ=57.49;MQ0=12;MQRankSum=-4.269;QD=1.74;ReadPosRankSum=-3.461;VQSLOD=-0.6697;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,2:47:44.20:0,44,652	0/0:16,0:16:32.99:0,33,232	0/1:22,0:10:2.92:3,0,32	0/1:20,0:7:13.89:14,0,24	0/1:33,3:35:39.20:39,0,280	0/0:17,0:17:37.74:0,38,275	0/0:13,0:14:24.34:0,24,250	0/0:24,1:25:37.05:0,37,332	0/0:22,1:23:22.39:0,22,346	0/0:24,0:24:56.70:0,57,441	0/0:21,0:21:59.64:0,60,453	0/1:17,0:17:8.23:8,0,173	0/0:24,0:24:30.64:0,31,241	0/0:20,0:20:35.37:0,35,275	0/0:25,3:28:31.80:0,32,419	0/0:20,0:20:39.98:0,40,286	0/0:33,0:35:77.35:0,77,560	1/1:38,0:38:10.79:333,11,0	0/0:23,0:20:41.61:0,42,288	0/0:24,0:24:63.57:0,64,478	0/0:13,0:11:16.82:0,17,173	0/0:21,0:21:52.34:0,52,384	0/0:25,1:26:38.33:0,38,479	0/0:24,1:26:27.30:0,27,368	0/0:23,0:25:58.81:0,59,446	0/1:31,0:28:7.40:7,0,192	0/0:36,0:37:79.07:0,79,607	0/1:9,0:9:12.42:27,0,12
chr10	102108555	.	CTAAGGCCATCT	C	524.72	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.908;DP=518;FS=0.000;HRun=0;HaplotypeScore=161.2478;InbreedingCoeff=0.9797;MQ=88.59;MQ0=0;MQRankSum=-4.187;QD=65.59;ReadPosRankSum=0.621;VQSLOD=3.4595;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,7154	0/0:14,0:14:42.13:0,42,2334	0/0:20,0:20:60.18:0,60,2820	0/0:18,0:18:54.19:0,54,2548	0/0:17,0:17:51.18:0,51,2448	0/0:15,0:15:45.15:0,45,2428	0/0:22,0:22:66.20:0,66,3478	0/0:21,0:21:63.22:0,63,3401	0/0:23,0:23:69.22:0,69,3521	0/0:20,0:20:60.19:0,60,2867	0/0:13,0:13:36.11:0,36,1906	0/0:23,0:23:69.22:0,69,3861	0/0:12,0:12:36.11:0,36,1895	0/0:16,0:16:48.16:0,48,2756	0/0:13,0:13:39.12:0,39,2018	0/0:15,0:15:45.15:0,45,2589	0/0:19,0:19:57.18:0,57,3097	1/1:0,8:8:18.06:615,18,0	0/0:19,0:19:54.16:0,54,2804	0/0:19,0:19:57.20:0,57,2709	0/0:29,0:29:87.28:0,87,4614	0/0:22,0:22:66.23:0,66,3529	0/0:7,0:7:21.07:0,21,1107	0/0:16,0:16:48.16:0,48,2679	0/0:21,0:21:63.22:0,63,3597	0/0:23,0:23:69.24:0,69,3601	0/0:25,0:24:75.24:0,75,3608	0/0:6,0:6:18.06:0,18,1022
chr10	102109651	.	GTC	G	250.44	PASS	AB=0.990;AC=3;AF=0.054;AN=56;BaseQRankSum=4.375;DP=568;FS=0.000;HRun=0;HaplotypeScore=92.1829;InbreedingCoeff=0.3468;MQ=73.39;MQ0=17;MQRankSum=-2.796;QD=2.14;ReadPosRankSum=-2.282;VQSLOD=1.5790;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:33.11:0,33,532	0/0:7,0:7:12.04:0,12,190	0/0:61,0:17:11.87:0,12,148	0/1:102,0:35:33.55:34,0,127	0/0:10,0:9:12.04:0,12,188	0/0:14,0:14:33.11:0,33,533	0/0:22,0:21:48.16:0,48,794	0/0:24,0:23:57.12:0,57,870	0/0:18,0:18:36.12:0,36,595	0/0:19,0:19:48.16:0,48,760	0/0:15,0:15:33.11:0,33,548	0/0:10,0:10:24.08:0,24,383	0/0:11,0:11:21.07:0,21,348	0/0:12,0:12:21.07:0,21,349	0/0:17,0:17:42.11:0,42,650	0/0:14,0:13:15.05:0,15,247	0/0:12,0:12:24.08:0,24,401	1/1:5,9:14:1.87:307,2,0	0/0:12,0:7:9.03:0,9,151	0/0:14,0:14:36.12:0,36,592	0/0:23,0:23:57.17:0,57,904	0/0:19,0:19:27.04:0,27,402	0/0:10,0:10:27.09:0,27,435	0/0:39,0:38:72.23:0,72,1175	0/0:14,0:14:30.08:0,30,454	0/0:17,0:16:42.13:0,42,664	0/0:12,0:12:24.08:0,24,398	0/0:6,0:6:6.02:0,6,97
chr10	102109708	.	TCACACACACACACACACACA	T	203.38	PASS	AB=0.923;AC=3;AF=0.063;AN=48;BaseQRankSum=2.010;DP=415;FS=6.784;HRun=0;HaplotypeScore=176.3513;InbreedingCoeff=0.2956;MQ=44.55;MQ0=29;MQRankSum=-1.964;QD=6.78;ReadPosRankSum=0.508;VQSLOD=1.9689;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:24.97:0,25,1883	./.	./.	./.	./.	0/0:15,0:15:26.99:0,27,1859	0/0:21,0:17:16.61:0,17,1132	0/0:24,0:21:30.10:0,30,1354	0/0:20,0:18:26.90:0,27,1998	0/0:13,0:11:24.08:0,24,1248	0/0:8,0:7:9.03:0,9,481	0/0:13,0:13:11.62:0,12,1023	0/0:13,0:13:12.04:0,12,960	0/0:16,0:16:17.61:0,18,1291	0/0:23,0:22:36.12:0,36,2800	0/0:11,0:8:2.90:0,3,220	0/0:24,0:19:42.51:0,43,2957	1/1:14,4:17:3.01:159,3,0	0/0:10,0:10:24.08:0,24,1563	0/0:12,0:12:14.82:0,15,889	0/0:23,0:22:18.06:0,18,1442	0/0:8,0:8:5.72:0,6,480	0/0:9,0:9:18.06:0,18,1264	0/0:41,0:38:44.95:0,45,3033	0/0:9,0:9:9.03:0,9,650	0/0:11,0:9:24.08:0,24,1474	0/1:11,1:12:99:134,0,1492	0/0:4,0:4:9.03:0,9,573
chr10	102111604	.	C	CT	10162.27	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-15.328;DP=731;FS=0.608;HRun=0;HaplotypeScore=68.2325;InbreedingCoeff=0.9975;MQ=91.97;MQ0=0;MQRankSum=-2.263;QD=41.82;ReadPosRankSum=4.578;VQSLOD=5.3546;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,59:59:99:2587,163,0	1/1:0,12:12:33.11:525,33,0	0/0:27,0:27:74.46:0,74,878	0/0:32,0:32:87.19:0,87,1124	1/1:1,36:37:99:1550,99,0	0/0:16,0:16:48.15:0,48,654	0/0:19,0:19:57.19:0,57,794	0/0:27,0:27:78.24:0,78,1046	0/0:22,0:22:63.20:0,63,863	0/0:23,0:23:69.23:0,69,951	0/0:16,0:16:48.16:0,48,667	1/1:0,23:23:69.24:1102,69,0	1/1:1,31:32:75.26:1198,75,0	0/0:32,0:32:93.29:0,93,1273	0/0:28,0:28:84.25:0,84,1139	1/1:0,24:24:60.20:959,60,0	0/0:25,0:25:75.23:0,75,1026	1/1:1,8:9:18.06:287,18,0	0/0:32,0:32:93.26:0,93,1229	0/0:20,0:20:60.17:0,60,804	0/0:37,0:37:99:0,111,1498	0/0:33,0:33:96.26:0,96,1298	0/0:24,0:24:69.22:0,69,938	0/0:28,0:28:81.24:0,81,1096	0/0:20,0:20:60.18:0,60,806	1/1:2,32:34:18.43:1428,18,0	0/0:27,0:26:78.13:0,78,976	1/1:0,13:13:33.11:527,33,0
chr10	102112150	.	A	AG	484.90	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.796;DP=531;FS=30.890;HRun=7;HaplotypeScore=73.1813;InbreedingCoeff=0.9217;MQ=82.06;MQ0=0;MQRankSum=-0.401;QD=20.20;ReadPosRankSum=-0.801;VQSLOD=1.6832;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.38:0,87,502	0/0:4,0:4:5.83:0,6,34	0/0:15,0:15:35.39:0,35,315	0/0:19,0:19:34.70:0,35,365	0/0:12,0:12:32.24:0,32,193	0/0:21,0:21:54.08:0,54,521	0/0:19,0:19:45.07:0,45,435	0/0:29,0:29:72.09:0,72,687	0/0:22,0:22:54.07:0,54,516	0/0:19,0:19:48.07:0,48,458	0/0:8,0:8:21.01:0,21,197	0/0:27,0:27:73.06:0,73,439	0/0:19,0:19:49.79:0,50,295	0/0:18,0:18:48.07:0,48,463	0/0:14,0:14:42.07:0,42,406	0/0:17,0:17:23.62:0,24,226	0/0:27,0:27:66.10:0,66,637	0/0:34,0:34:96.15:0,96,926	0/0:22,0:22:57.08:0,57,546	0/0:12,0:12:33.05:0,33,319	0/0:47,0:47:99:0,114,1096	0/0:11,0:11:30.04:0,30,287	0/0:14,0:14:33.05:0,33,318	0/0:14,0:14:39.04:0,39,370	0/0:13,0:13:30.04:0,30,289	1/1:3,13:16:13.13:425,13,0	0/0:18,0:18:51.08:0,51,493	1/1:3,5:8:15.04:173,15,0
chr10	102112991	.	ACTCTCTCTCTCTCTCT	A	2682.91	PASS	AB=0.619;AC=14;AF=0.250;AN=56;BaseQRankSum=7.293;DP=544;FS=28.246;HRun=0;HaplotypeScore=194.7463;InbreedingCoeff=0.5865;MQ=45.41;MQ0=53;MQRankSum=-8.573;QD=26.56;ReadPosRankSum=-0.500;VQSLOD=1.2552;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,2:9:3.39:128,3,0	1/1:1,3:4:5.93:231,6,0	0/0:9,0:6:18.06:0,18,594	0/0:6,0:3:9.01:0,9,472	1/1:7,9:18:0.70:2,1,0	0/0:32,0:30:64.85:0,65,4318	0/0:29,0:25:59.36:0,59,3903	0/0:26,0:20:56.29:0,56,3388	0/0:20,0:19:40.96:0,41,2980	0/0:21,0:20:57.20:0,57,3803	0/0:17,0:16:45.15:0,45,2571	1/1:8,4:9:6.02:215,6,0	0/1:6,2:10:47.82:338,0,48	0/0:20,0:17:39.12:0,39,2368	0/0:14,0:13:27.09:0,27,1758	1/1:12,4:16:3.48:113,3,0	0/0:37,0:34:83.94:0,84,5368	0/0:12,0:12:12.04:0,12,322	0/0:11,0:9:27.09:0,27,1268	0/0:19,0:18:42.14:0,42,2551	0/0:52,1:39:60.09:0,60,3850	0/0:20,0:20:45.15:0,45,2978	0/0:24,0:19:30.10:0,30,1747	0/0:30,0:25:51.18:0,51,3082	0/0:20,0:16:39.13:0,39,2666	0/1:6,17:23:99:1692,0,169	0/0:23,0:20:59.01:0,59,3514	1/1:3,0:2:3.01:113,3,0
chr10	102113007	.	T	TCTCTCACACA	580.41	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=3.387;DP=568;FS=17.966;HRun=0;HaplotypeScore=182.2569;InbreedingCoeff=0.1366;MQ=49.58;MQ0=44;MQRankSum=-2.041;QD=3.98;ReadPosRankSum=-4.786;VQSLOD=0.0389;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:13:6.11:38,0,6	0/1:5,0:5:45.70:46,0,62	0/1:23,0:14:0.04:0,0,612	0/0:14,0:9:6.51:0,7,363	1/1:18,0:18:5.16:70,5,0	0/0:25,0:23:60.20:0,60,1638	0/0:30,0:27:56.92:0,57,1535	0/0:29,0:25:66.08:0,66,1570	0/0:19,0:18:51.17:0,51,1404	0/0:22,0:22:56.87:0,57,1225	0/0:17,0:17:45.15:0,45,1219	0/1:15,0:12:27.91:68,0,28	0/1:13,0:11:33.73:34,0,200	0/0:21,0:18:42.14:0,42,960	0/0:15,0:14:36.12:0,36,835	0/1:13,0:13:18.31:18,0,30	0/0:39,0:36:93.21:0,93,2408	1/1:2,11:17:6.91:246,7,0	0/0:12,0:9:23.42:0,23,373	0/0:19,0:18:45.22:0,45,1259	0/0:46,0:34:60.14:0,60,1462	0/0:19,0:19:48.16:0,48,1360	0/0:23,0:19:36.12:0,36,1017	0/0:28,0:24:54.12:0,54,1226	0/0:21,0:18:51.18:0,51,1474	0/1:24,0:24:99:171,0,382	0/0:23,0:21:60.21:0,60,1719	0/1:3,0:2:27.57:40,0,28
chr10	102114663	.	AT	A	3702.28	PASS	AB=0.685;AC=15;AF=0.268;AN=56;BaseQRankSum=14.453;DP=514;FS=2.967;HRun=4;HaplotypeScore=62.1117;InbreedingCoeff=0.7535;MQ=71.63;MQ0=0;MQRankSum=-0.011;QD=26.26;ReadPosRankSum=1.198;VQSLOD=2.6623;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:81.25:970,81,0	1/1:0,5:5:6.02:72,6,0	0/0:19,0:15:32.75:0,33,299	0/1:8,0:7:13.79:14,0,68	1/1:2,21:23:47.98:536,48,0	0/0:18,0:18:51.16:0,51,696	0/0:17,0:17:48.13:0,48,636	0/0:36,0:36:99:0,105,1342	0/0:13,0:13:39.11:0,39,514	0/0:21,0:21:60.17:0,60,771	0/0:20,0:20:57.18:0,57,780	1/1:1,7:8:21.06:252,21,0	0/1:2,14:16:2.85:391,0,3	0/0:17,0:17:48.12:0,48,597	0/0:13,0:13:39.12:0,39,528	1/1:1,15:16:42.13:502,42,0	0/0:24,0:24:69.19:0,69,914	0/0:31,0:31:87.24:0,87,1163	0/0:20,0:20:54.15:0,54,705	0/0:30,0:30:78.26:0,78,1089	0/0:13,0:13:36.11:0,36,485	0/0:9,0:9:24.08:0,24,336	0/0:16,0:16:48.15:0,48,653	0/0:10,0:10:30.09:0,30,404	0/0:21,0:21:57.18:0,57,783	0/1:2,23:25:8.75:751,0,9	0/0:25,0:25:69.21:0,69,919	1/1:0,7:7:18.06:215,18,0
chr10	102114815	.	AG	A	1076.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.719;DP=563;FS=13.046;HRun=1;HaplotypeScore=75.9648;InbreedingCoeff=0.9658;MQ=84.62;MQ0=0;MQRankSum=-2.670;QD=37.10;ReadPosRankSum=1.989;VQSLOD=3.0326;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,2029	0/0:4,0:4:12.04:0,12,192	0/0:19,0:18:54.17:0,54,838	0/0:22,0:22:63.20:0,63,925	0/0:24,0:24:72.21:0,72,1103	0/0:23,0:22:69.22:0,69,1079	0/0:25,0:25:72.18:0,72,1056	0/0:34,0:34:99:0,99,1582	0/0:15,0:15:45.15:0,45,719	0/0:21,0:21:60.20:0,60,960	0/0:19,0:19:57.19:0,57,901	0/0:8,0:8:21.05:0,21,312	0/0:20,0:20:51.17:0,51,811	0/0:17,0:17:51.15:0,51,769	0/0:20,0:20:60.17:0,60,908	0/0:12,0:12:33.11:0,33,527	0/0:23,0:23:66.22:0,66,1048	1/1:1,28:29:84.28:1171,84,0	0/0:22,0:22:66.22:0,66,1050	0/0:15,0:15:45.15:0,45,715	0/0:30,0:30:90.27:0,90,1386	0/0:12,0:12:36.12:0,36,575	0/0:11,0:11:33.11:0,33,527	0/0:17,0:17:51.17:0,51,810	0/0:18,0:17:54.18:0,54,863	0/0:15,0:15:45.07:0,45,661	0/0:31,0:31:93.32:0,93,1484	0/0:13,0:13:39.13:0,39,623
chr10	102114866	.	A	AT	4126.82	PASS	AB=0.538;AC=15;AF=0.268;AN=56;BaseQRankSum=14.584;DP=543;FS=0.000;HRun=6;HaplotypeScore=76.1642;InbreedingCoeff=0.9336;MQ=86.70;MQ0=0;MQRankSum=-4.124;QD=29.90;ReadPosRankSum=3.049;VQSLOD=4.2269;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:29:66.21:830,66,0	1/1:0,6:6:18.06:226,18,0	0/0:22,0:22:60.14:0,60,612	0/0:16,0:16:45.09:0,45,452	1/1:3,19:22:54.17:679,54,0	0/0:25,0:25:63.14:0,63,642	0/0:24,0:24:60.13:0,60,612	0/0:30,0:30:75.16:0,75,760	0/0:15,0:15:42.09:0,42,428	0/0:22,0:22:51.11:0,51,520	0/0:21,0:21:51.11:0,51,520	1/1:2,8:10:27.09:336,27,0	1/1:3,14:17:33.11:415,33,0	0/0:15,0:15:45.10:0,45,459	0/0:21,0:21:60.13:0,60,612	1/1:0,18:18:51.16:641,51,0	0/0:31,0:31:90.17:0,90,909	0/0:16,0:16:42.03:0,42,410	0/0:24,0:24:57.12:0,57,581	0/0:13,0:12:36.08:0,36,367	0/0:15,0:15:42.09:0,42,428	0/0:13,0:13:36.06:0,36,361	0/0:24,0:24:66.14:0,66,673	0/0:11,0:11:33.07:0,33,337	0/0:19,0:18:54.12:0,54,551	0/1:3,18:21:4.05:584,0,4	0/0:28,0:27:78.14:0,78,781	1/1:4,10:14:33.11:415,33,0
chr10	102114919	.	CTT	C	2620.33	PASS	AB=0.735;AC=15;AF=0.268;AN=56;BaseQRankSum=15.450;DP=581;FS=0.803;HRun=4;HaplotypeScore=101.8989;InbreedingCoeff=0.9056;MQ=73.54;MQ0=3;MQRankSum=-11.589;QD=19.70;ReadPosRankSum=-0.162;VQSLOD=0.6486;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,11:22:55.49:583,55,0	1/1:4,2:6:17.39:172,17,0	0/0:26,0:17:42.07:0,42,674	0/0:21,0:17:33.10:0,33,568	1/1:11,10:21:49.99:450,50,0	0/0:23,0:23:69.23:0,69,1249	0/0:17,0:17:51.17:0,51,916	0/0:37,0:37:99:0,102,1789	0/0:13,0:13:39.13:0,39,730	0/0:25,0:24:75.26:0,75,1401	0/0:20,0:20:57.19:0,57,1016	1/1:8,3:11:24.22:158,24,0	1/1:17,2:19:45.43:388,45,0	0/0:20,0:20:54.19:0,54,999	0/0:18,0:18:54.19:0,54,1012	1/1:15,4:19:21.07:341,21,0	0/0:28,0:28:81.24:0,81,1407	0/0:20,0:20:54.13:0,54,931	0/0:30,0:30:90.29:0,90,1610	0/0:23,0:23:69.21:0,69,1204	0/0:11,0:11:33.09:0,33,556	0/0:20,0:20:60.19:0,60,1061	0/0:31,0:31:93.32:0,93,1728	0/0:14,0:14:36.12:0,36,674	0/0:21,0:21:63.22:0,63,1180	0/1:16,9:25:99:450,0,113	0/0:30,0:29:90.29:0,90,1611	1/1:2,7:9:23.77:279,24,0
chr10	102115743	.	CTAT	C	187.25	PASS	AB=0.835;AC=9;AF=0.167;AN=54;BaseQRankSum=8.257;DP=760;FS=16.310;HRun=0;HaplotypeScore=129.3874;InbreedingCoeff=0.2639;MQ=57.11;MQ0=2;MQRankSum=-7.147;QD=3.60;ReadPosRankSum=1.243;VQSLOD=1.7772;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,0:2:5.91:38,6,0	0/0:31,0:24:72.16:0,72,1302	0/0:44,0:38:99:0,103,1818	0/1:4,2:6:24.30:60,0,24	0/0:19,0:19:57.20:0,57,1275	0/0:30,0:30:90.13:0,90,1929	0/0:45,0:45:99:0,132,2921	0/0:36,0:36:99:0,108,2400	0/0:44,0:44:99:0,132,2744	0/0:26,0:26:69.22:0,69,1479	0/1:6,4:10:56.61:103,0,57	0/1:6,2:8:44.06:63,0,44	0/0:42,0:42:99:0,126,2765	0/0:42,0:42:99:0,120,2763	0/1:9,1:10:17.58:18,0,170	0/0:53,1:53:99:0,125,3333	0/0:39,5:39:39.38:0,39,1767	0/0:20,0:20:60.19:0,60,1299	0/0:13,0:13:35.78:0,36,736	0/0:58,0:56:99:0,160,3601	0/0:25,0:25:66.21:0,66,1406	0/0:17,0:17:48.12:0,48,993	0/0:64,0:64:99:0,187,4140	0/0:23,0:23:60.10:0,60,1333	0/1:10,0:10:12.87:13,0,55	0/0:29,0:29:84.25:0,84,1834	1/1:5,0:5:6.91:32,7,0
chr10	102115749	.	TTGC	T	75.36	PASS	AB=0.853;AC=6;AF=0.115;AN=52;BaseQRankSum=7.824;DP=765;FS=14.260;HRun=0;HaplotypeScore=134.1912;InbreedingCoeff=-0.1155;MQ=56.63;MQ0=10;MQRankSum=-7.397;QD=1.67;ReadPosRankSum=1.678;VQSLOD=1.9048;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:30,0:22:46.04:0,46,963	0/0:44,0:35:86.09:0,86,1532	0/1:4,2:5:24.62:45,0,25	0/0:23,0:22:60.15:0,60,1211	0/0:29,0:29:87.23:0,87,1865	0/0:45,0:45:99:0,126,2721	0/0:38,0:38:99:0,111,2327	0/0:47,0:45:99:0,126,2619	0/0:26,0:25:65.88:0,66,1348	0/1:4,3:7:62.54:82,0,63	0/1:5,2:7:36.91:37,0,51	0/0:42,0:42:99:0,123,2550	0/0:43,0:43:99:0,123,2630	0/1:7,1:8:1.04:1,0,176	0/0:53,1:53:99:0,130,3102	0/0:38,3:37:24.59:0,25,1602	0/0:22,0:21:44.14:0,44,1025	0/0:14,0:14:39.10:0,39,782	0/0:66,0:63:99:0,170,3682	0/0:23,0:23:63.17:0,63,1362	0/0:18,0:16:48.16:0,48,995	0/0:61,0:61:99:0,175,3887	0/0:23,0:20:57.20:0,57,1257	0/1:11,0:10:11.30:11,0,48	0/0:27,0:27:81.21:0,81,1777	0/1:6,0:6:12.57:13,0,47
chr10	102115753	.	TGTTGCTG	T	703.93	PASS	AB=0.857;AC=6;AF=0.111;AN=54;BaseQRankSum=8.242;DP=751;FS=29.398;HRun=0;HaplotypeScore=187.8231;InbreedingCoeff=0.2670;MQ=56.42;MQ0=17;MQRankSum=-7.392;QD=22.00;ReadPosRankSum=0.372;VQSLOD=1.3160;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:1:3:0,3,29	./.	0/0:27,0:18:54.03:0,54,1377	0/0:42,0:31:67.50:0,67,2270	0/1:6,0:5:7.18:23,0,7	0/0:23,0:22:66.21:0,66,2148	0/0:31,0:31:93.30:0,93,3373	0/0:43,0:43:99:0,126,4025	0/0:37,0:37:99:0,105,4001	0/0:43,0:41:99:0,123,4170	0/0:26,0:25:69.24:0,69,2278	0/1:5,0:6:38.43:38,0,46	0/1:6,0:6:12.65:13,0,73	0/0:41,0:41:99:0,120,4169	0/0:44,0:44:99:0,129,4519	0/0:8,0:8:10.32:0,10,155	0/0:50,0:49:99:0,133,5411	0/0:40,0:36:42.60:0,43,2426	0/0:21,0:19:54.15:0,54,1616	0/0:13,0:13:39.13:0,39,1507	0/0:66,0:63:99:0,183,6514	0/0:26,0:22:63.22:0,63,2246	0/0:19,0:16:48.16:0,48,1533	0/0:63,0:63:99:0,187,6786	0/0:25,0:22:60.21:0,60,1999	1/1:2,4:8:24.08:521,24,0	0/0:27,0:27:81.28:0,81,2979	0/1:1,3:4:25.90:237,0,26
chr10	102115779	.	T	TTAC	1143.12	PASS	AB=0.918;AC=5;AF=0.089;AN=56;BaseQRankSum=8.766;DP=732;FS=18.841;HRun=0;HaplotypeScore=122.1223;InbreedingCoeff=0.1753;MQ=51.33;MQ0=39;MQRankSum=-8.521;QD=19.71;ReadPosRankSum=0.814;VQSLOD=2.4232;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:2:0.89:0,1,2	0/0:2,0:2:3.44:0,3,20	0/0:28,0:12:30.05:0,30,482	0/0:35,0:17:32.18:0,32,543	0/0:4,0:3:2.88:0,3,15	0/0:25,0:23:69.24:0,69,1200	0/0:28,0:28:81.26:0,81,1369	0/0:40,0:36:96.77:0,97,1602	0/0:37,0:37:99:0,105,1747	0/0:40,0:34:92.51:0,93,1536	0/0:22,0:18:45.15:0,45,755	0/1:6,0:6:40.27:60,0,40	0/0:1,0:1:3.01:0,3,30	0/0:37,0:37:99:0,106,1838	0/0:42,0:42:99:0,120,2093	0/0:1,0:1:2.96:0,3,19	0/0:50,0:49:99:0,144,2460	0/1:29,12:38:99:1037,0,153	0/0:25,0:18:42.11:0,42,670	0/0:25,0:19:48.15:0,48,801	0/0:76,0:73:99:0,196,3308	0/0:23,0:18:45.15:0,45,773	0/0:19,0:14:30.05:0,30,490	0/0:60,0:60:99:0,175,2923	0/0:24,0:20:48.07:0,48,756	0/1:7,0:5:36.22:86,0,36	0/0:26,0:26:71.82:0,72,1190	1/1:1,1:2:3.01:71,3,0
chr10	102115864	.	T	TG	827.72	PASS	AB=0.803;AC=5;AF=0.089;AN=56;BaseQRankSum=8.063;DP=889;FS=0.000;HRun=0;HaplotypeScore=104.9448;InbreedingCoeff=-0.1085;MQ=47.94;MQ0=83;MQRankSum=-7.134;QD=9.74;ReadPosRankSum=-1.502;VQSLOD=3.3020;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,3:11:68.35:68,0,231	0/1:3,1:3:38.42:38,0,75	0/0:49,0:2:5.99:0,6,64	0/0:55,0:10:27.03:0,27,306	0/1:12,1:6:31.44:31,0,35	0/0:13,0:13:27.08:0,27,361	0/0:51,0:51:99:0,147,1969	0/0:44,0:44:99:0,123,1692	0/0:61,0:61:99:0,140,2276	0/0:51,0:35:96.25:0,96,1262	0/0:13,0:12:20.84:0,21,294	0/0:9,1:8:18.02:0,18,223	0/1:10,3:11:63.19:63,0,286	0/0:43,0:43:99:0,114,1593	0/0:47,0:47:99:0,129,1801	0/0:11,3:11:15.23:0,15,259	0/0:43,1:44:99:0,101,1731	0/1:12,23:29:99:744,0,209	0/0:33,0:16:48.11:0,48,606	0/0:18,0:13:33.03:0,33,404	0/0:72,1:69:99:0,146,2473	0/0:31,0:25:60.19:0,60,824	0/0:19,0:13:18.05:0,18,237	0/0:61,0:61:99:0,184,2510	0/0:14,0:12:21.05:0,21,279	0/0:19,0:8:21.06:0,21,276	0/0:38,0:37:99:0,108,1432	0/0:3,0:2:6.02:0,6,84
chr10	102115883	.	T	TTAC	1696.36	PASS	AB=0.854;AC=13;AF=0.232;AN=56;BaseQRankSum=10.335;DP=888;FS=39.944;HRun=0;HaplotypeScore=127.2910;InbreedingCoeff=0.5219;MQ=46.62;MQ0=104;MQRankSum=-9.397;QD=13.68;ReadPosRankSum=-2.084;VQSLOD=1.5020;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,5:11:16.73:313,17,0	1/1:2,0:2:3.01:35,3,0	0/0:47,0:2:6.02:0,6,91	0/0:50,0:8:23.65:0,24,312	1/1:6,2:5:6.02:109,6,0	0/0:14,0:13:30.10:0,30,501	0/0:46,0:46:99:0,123,2006	0/0:44,0:36:99:0,99,1584	0/0:63,0:63:99:0,184,3011	0/0:57,0:37:99:0,111,1907	0/0:16,0:14:33.08:0,33,522	1/1:5,2:5:3.01:68,3,0	0/1:16,3:15:14.58:349,0,15	0/0:43,0:43:99:0,117,1941	0/0:45,0:45:99:0,120,1954	1/1:11,1:10:3.48:69,3,0	0/0:46,0:46:99:0,138,2310	0/1:39,7:45:99:761,0,361	0/0:25,0:15:42.14:0,42,712	0/0:13,0:8:24.05:0,24,367	0/0:75,0:69:99:0,172,2792	0/0:37,0:28:63.20:0,63,1070	0/0:21,0:14:36.12:0,36,629	0/0:64,0:64:99:0,190,3177	0/0:20,0:12:33.11:0,33,581	0/1:10,2:6:40.32:150,0,40	0/0:35,0:34:99:0,99,1620	0/0:3,0:2:6.02:0,6,80
chr10	102115886	.	CTGTTGT	C	341.12	PASS	AB=0.937;AC=8;AF=0.143;AN=56;BaseQRankSum=7.606;DP=897;FS=11.574;HRun=0;HaplotypeScore=170.0642;InbreedingCoeff=-0.1422;MQ=46.38;MQ0=106;MQRankSum=-6.952;QD=2.58;ReadPosRankSum=-0.636;VQSLOD=2.1151;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:15:10.97:11,0,108	0/1:1,1:2:13.98:57,0,14	0/0:49,0:2:5.97:0,6,73	0/0:50,0:8:10.21:0,10,454	0/1:5,0:4:16.11:41,0,16	0/0:18,0:17:36.02:0,36,861	0/0:44,0:44:99:0,120,3482	0/0:44,0:34:90.21:0,90,2404	0/0:59,0:59:99:0,177,5034	0/0:55,0:37:99:0,111,3104	0/0:15,0:14:33.08:0,33,883	0/1:9,0:7:4.30:4,0,44	0/1:20,0:16:28.59:29,0,137	0/0:44,0:44:99:0,117,3298	0/0:45,0:45:99:0,120,3373	0/1:11,1:10:0.67:1,0,124	0/0:49,0:49:99:0,144,3983	0/1:52,1:50:99:279,0,693	0/0:27,0:15:42.07:0,42,1075	0/0:12,0:8:18.06:0,18,647	0/0:73,0:66:99:0,168,4509	0/0:37,0:29:60.21:0,60,1895	0/0:20,0:14:39.03:0,39,1134	0/0:64,0:64:99:0,187,5625	0/0:20,0:13:36.11:0,36,1074	0/1:11,1:7:43.34:43,0,161	0/0:35,0:34:93.10:0,93,2700	0/0:3,1:3:5.99:0,6,49
chr10	102115914	.	TG	T	2430.70	PASS	AB=0.626;AC=7;AF=0.135;AN=52;BaseQRankSum=8.674;DP=956;FS=7.264;HRun=1;HaplotypeScore=116.6225;InbreedingCoeff=-0.1584;MQ=45.12;MQ0=135;MQRankSum=-3.381;QD=18.01;ReadPosRankSum=-0.450;VQSLOD=3.3230;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,18:23:99:326,0,283	0/1:3,5:7:34.80:114,0,35	./.	./.	0/1:6,3:9:66.12:66,0,169	0/0:25,0:23:45.15:0,45,697	0/0:44,0:44:99:0,129,1924	0/0:47,0:29:81.25:0,81,1240	0/0:49,0:49:99:0,141,2191	0/0:41,0:34:99:0,102,1560	0/0:14,0:9:23.89:0,24,359	0/1:4,21:23:38:654,0,38	0/1:10,21:26:40.02:806,0,40	0/0:51,0:51:99:0,129,1995	0/0:47,0:47:99:0,132,2103	0/1:9,9:16:99:293,0,229	0/0:46,0:45:99:0,132,2060	0/0:63,1:61:78.43:0,78,1683	0/0:32,0:19:54.17:0,54,830	0/0:18,0:16:36.55:0,37,506	0/0:68,0:60:99:0,148,2303	0/0:29,0:25:60.07:0,60,889	0/0:13,0:11:27.01:0,27,391	0/0:63,0:61:99:0,178,2779	0/0:21,0:14:30.10:0,30,479	0/1:7,11:13:99:299,0,153	0/0:31,0:30:78.25:0,78,1190	0/0:6,0:5:9.03:0,9,143
chr10	102115942	.	GTTGTTGCT	G	355.04	PASS	AB=0.855;AC=4;AF=0.071;AN=56;BaseQRankSum=7.125;DP=1034;FS=0.812;HRun=0;HaplotypeScore=246.3676;InbreedingCoeff=-0.0844;MQ=46.24;MQ0=97;MQRankSum=-7.055;QD=3.29;ReadPosRankSum=0.854;VQSLOD=2.0172;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:28:60.20:0,60,1975	0/1:11,1:11:57.67:58,0,872	0/0:41,0:1:3.01:0,3,79	0/0:57,0:10:27.09:0,27,719	0/1:11,2:8:93.82:94,0,343	0/0:30,0:30:57.19:0,57,2094	0/0:50,0:50:99:0,141,5634	0/0:48,0:37:99:0,105,3480	0/0:56,0:56:99:0,144,5127	0/0:47,0:40:99:0,117,3727	0/0:12,0:9:24.07:0,24,711	0/0:35,0:33:86.11:0,86,3382	0/0:43,0:39:99:0,108,4363	0/0:53,0:53:99:0,138,5328	0/0:45,0:45:99:0,126,4576	0/0:31,0:29:61.38:0,61,2979	0/0:46,0:45:99:0,132,5128	0/1:73,1:71:79.48:79,0,1427	0/0:21,0:11:27.09:0,27,1059	0/0:23,0:19:42.14:0,42,1477	0/0:71,0:63:99:0,159,5468	0/0:19,0:16:39.09:0,39,1446	0/0:14,0:9:18.05:0,18,566	0/0:75,0:73:99:0,208,7937	0/0:14,0:14:32.76:0,33,1064	0/0:29,0:20:40.60:0,41,1848	0/0:27,0:26:72.21:0,72,2134	0/1:4,5:9:99:233,0,444
chr10	102115950	.	T	TG	1751.16	PASS	AB=0.891;AC=4;AF=0.071;AN=56;BaseQRankSum=11.536;DP=1054;FS=10.442;HRun=0;HaplotypeScore=146.3814;InbreedingCoeff=-0.0775;MQ=46.75;MQ0=66;MQRankSum=-9.890;QD=10.61;ReadPosRankSum=1.311;VQSLOD=3.4865;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:30:61.38:0,61,829	0/0:16,1:16:19.37:0,19,422	0/1:38,0:5:7.80:8,0,82	0/0:55,0:15:39.09:0,39,478	0/1:17,0:12:38.16:38,0,144	0/0:26,0:26:54.18:0,54,754	0/0:55,0:55:99:0,159,2136	0/0:45,0:39:99:0,114,1547	0/0:52,0:52:99:0,141,1914	0/0:45,0:37:99:0,105,1428	0/0:15,0:11:27.08:0,27,363	0/0:35,3:36:48.66:0,49,1242	0/0:48,0:43:99:0,120,1652	0/0:51,0:51:99:0,138,1851	0/0:46,0:46:99:0,126,1678	0/1:32,3:33:3.63:4,0,1071	0/0:53,1:53:99:0,159,2113	0/1:33,42:71:99:1799,0,295	0/0:18,0:10:30.10:0,30,420	0/0:25,0:21:42.10:0,42,541	0/0:62,0:56:99:0,150,2059	0/0:19,0:17:42.13:0,42,572	0/0:15,0:10:17.93:0,18,235	0/0:73,0:71:99:0,192,2800	0/0:17,0:17:28.91:0,29,395	0/0:36,1:27:21.47:0,21,854	0/0:27,0:26:72.05:0,72,883	0/0:10,0:10:1.16:0,1,151
chr10	102116041	.	TTAC	T	63.35	PASS	AB=0.940;AC=6;AF=0.111;AN=54;BaseQRankSum=5.076;DP=957;FS=22.025;HRun=0;HaplotypeScore=93.4707;InbreedingCoeff=0.1097;MQ=35.19;MQ0=222;MQRankSum=-3.579;QD=0.72;ReadPosRankSum=-2.112;VQSLOD=0.0351;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:6:8.94:0,9,85	0/0:11,0:11:15.78:0,16,198	0/0:47,0:2:6.01:0,6,76	0/0:56,0:4:5.60:0,6,28	0/1:17,2:17:44.47:44,0,69	0/0:20,0:11:21.07:0,21,424	0/0:52,0:31:69.22:0,69,1496	0/0:43,0:9:27:0,27,436	0/0:60,0:58:99:0,102,2220	0/0:50,0:18:54.19:0,54,1211	0/0:24,0:8:3.01:0,3,50	0/0:11,2:9:14.74:0,15,143	0/1:23,1:17:39.66:40,0,63	0/0:48,0:44:81.75:0,82,1868	0/0:52,0:48:71.81:0,72,1474	0/1:12,1:13:23.39:23,0,64	0/0:50,0:43:93.24:0,93,1874	0/0:29,1:25:32.92:0,33,540	0/0:19,0:4:12.04:0,12,270	0/0:24,0:12:22.32:0,22,477	0/0:76,0:49:90.67:0,91,1783	0/0:28,0:17:12.04:0,12,283	./.	0/0:69,0:53:99:0,102,2281	0/0:22,0:8:15.05:0,15,318	0/1:28,1:23:28.24:28,0,365	0/0:32,0:28:65.79:0,66,1462	1/1:3,0:3:5:47,5,0
chr10	102116059	.	T	TTGC	609.31	PASS	AB=0.909;AC=12;AF=0.250;AN=48;BaseQRankSum=8.284;DP=896;FS=40.295;HRun=0;HaplotypeScore=83.1637;InbreedingCoeff=0.3570;MQ=33.20;MQ0=256;MQRankSum=-7.232;QD=6.15;ReadPosRankSum=0.079;VQSLOD=0.6878;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:2:0:0,0,0	0/1:6,0:6:8.12:42,0,8	./.	./.	1/1:13,0:11:12.06:64,12,0	0/0:22,0:12:15.02:0,15,215	0/0:52,0:24:32.96:0,33,427	0/0:36,0:7:21.07:0,21,336	0/0:56,0:54:78.11:0,78,1159	0/0:54,0:17:42.11:0,42,628	./.	1/1:9,1:6:14.83:151,15,0	0/1:15,0:11:8.37:73,0,8	0/0:50,0:46:72.10:0,72,1014	0/0:49,0:45:57.18:0,57,880	0/1:3,1:4:33.31:33,0,70	0/0:47,0:39:52.11:0,52,916	0/1:13,12:25:40.81:334,0,41	0/0:14,0:3:6.02:0,6,88	0/0:30,0:18:27.09:0,27,432	0/0:74,0:46:38.85:0,39,521	0/0:26,0:13:8.89:0,9,124	./.	0/0:76,0:56:99:0,102,1371	0/0:19,0:5:8.99:0,9,116	0/1:13,0:10:12.76:16,0,13	0/0:35,0:30:56.34:0,56,821	1/1:1,0:1:3.01:41,3,0
chr10	102116062	.	CTGTTGT	C	448.42	PASS	AB=0.983;AC=12;AF=0.250;AN=48;BaseQRankSum=7.337;DP=879;FS=38.361;HRun=0;HaplotypeScore=93.5844;InbreedingCoeff=0.4228;MQ=32.91;MQ0=255;MQRankSum=-6.308;QD=5.68;ReadPosRankSum=0.640;VQSLOD=-0.2979;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:5,0:5:7.94:42,0,8	./.	./.	1/1:10,0:9:4.15:30,4,0	0/0:21,0:11:15.03:0,15,423	0/0:52,0:23:32.96:0,33,657	0/0:39,0:8:24.07:0,24,710	0/0:58,0:56:90.61:0,91,2278	0/0:52,0:16:48.10:0,48,1245	0/0:21,0:6:3:0,3,27	1/1:8,2:6:14.75:147,15,0	1/1:14,1:11:9.96:68,10,0	0/0:52,0:48:74.96:0,75,1868	0/0:46,0:43:57.18:0,57,1584	0/1:4,0:4:48.34:61,0,48	0/0:45,0:37:72.08:0,72,1910	0/1:26,2:25:99:167,0,153	0/0:14,0:3:9.01:0,9,173	0/0:32,0:20:33.06:0,33,854	0/0:69,0:43:44.43:0,44,1061	0/0:23,0:11:9.02:0,9,244	./.	0/0:78,0:58:99:0,102,2639	0/0:19,0:5:8.99:0,9,205	0/1:6,0:4:13.90:14,0,14	0/0:35,0:30:62.23:0,62,1539	1/1:0,1:1:3.01:68,3,0
chr10	102116092	.	TTAC	T	55.05	PASS	AB=0.920;AC=5;AF=0.132;AN=38;BaseQRankSum=3.559;DP=783;FS=7.975;HRun=0;HaplotypeScore=70.9063;InbreedingCoeff=0.4804;MQ=33.82;MQ0=226;MQRankSum=-2.791;QD=1.84;ReadPosRankSum=-0.301;VQSLOD=0.2739;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	0/0:24,0:16:15.05:0,15,318	0/0:61,0:35:39.13:0,39,826	0/0:35,0:14:39.12:0,39,846	0/0:50,0:48:75.64:0,76,1644	0/0:36,0:13:39.13:0,39,856	0/0:16,0:5:3.01:0,3,71	1/1:4,2:4:5.74:36,6,0	./.	0/0:50,0:46:73.16:0,73,1607	0/0:48,0:46:87.28:0,87,1989	0/0:1,0:1:2.37:0,2,8	0/0:42,0:33:51.14:0,51,1140	0/1:21,2:22:68.52:69,0,186	0/0:12,0:5:15.05:0,15,354	0/0:29,0:19:30.10:0,30,597	0/0:71,0:48:42.59:0,43,837	0/0:19,0:7:6.02:0,6,103	./.	0/0:77,0:57:87.25:0,87,1785	./.	./.	0/0:31,0:26:56.88:0,57,1187	1/1:0,1:1:3.01:52,3,0
chr10	102116110	.	T	TTAC	137.41	PASS	AB=0.778;AC=3;AF=0.065;AN=46;BaseQRankSum=4.359;DP=808;FS=6.011;HRun=0;HaplotypeScore=84.3243;InbreedingCoeff=0.2410;MQ=37.78;MQ0=162;MQRankSum=-3.481;QD=6.25;ReadPosRankSum=0.246;VQSLOD=1.9233;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:42,0:1:3.01:0,3,38	0/0:51,0:2:6.02:0,6,84	0/0:2,0:1:2.88:0,3,15	0/0:26,0:22:15.05:0,15,254	0/0:63,0:47:78.27:0,78,1367	0/0:38,0:24:66.18:0,66,1092	0/0:53,0:51:93.20:0,93,1636	0/0:44,0:27:72.16:0,72,1147	0/0:17,0:9:12.03:0,12,181	./.	1/1:1,0:1:2.96:19,3,0	0/0:53,0:50:89.62:0,90,1572	0/0:52,0:52:99:0,108,1886	0/0:1,0:1:3.01:0,3,33	0/0:45,0:38:78.19:0,78,1293	0/1:15,5:19:91.36:206,0,91	0/0:21,0:7:21.07:0,21,352	0/0:24,0:19:33.11:0,33,576	0/0:82,0:64:57.58:0,58,1001	0/0:19,0:10:21.07:0,21,361	0/0:24,0:13:3.01:0,3,53	0/0:72,0:56:99:0,102,1733	0/0:18,0:11:17.97:0,18,238	./.	0/0:33,0:28:66.23:0,66,1156	./.
chr10	102116113	.	CTGTTGT	C	214.79	PASS	AB=0.783;AC=5;AF=0.109;AN=46;BaseQRankSum=4.557;DP=815;FS=10.366;HRun=0;HaplotypeScore=102.6428;InbreedingCoeff=0.3975;MQ=37.62;MQ0=164;MQRankSum=-3.903;QD=10.23;ReadPosRankSum=-0.431;VQSLOD=1.7306;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:43,0:1:2.98:0,3,21	0/0:52,0:2:5.99:0,6,103	1/1:2,0:1:2.94:18,3,0	0/0:27,0:22:15.04:0,15,389	0/0:62,0:47:84.17:0,84,2179	0/0:38,0:24:63.15:0,63,1550	0/0:54,0:51:93.28:0,93,3254	0/0:49,0:27:81.18:0,81,2090	0/0:17,0:9:12.03:0,12,246	./.	1/1:1,0:1:3:27,3,0	0/0:55,0:51:89.66:0,90,3057	0/0:58,0:55:99:0,105,3410	0/0:1,0:1:2.92:0,3,17	0/0:44,0:38:81.14:0,81,2362	0/1:13,5:17:85.83:270,0,86	0/0:19,0:7:21.01:0,21,354	0/0:24,0:20:33.10:0,33,1070	0/0:79,0:61:60.10:0,60,1816	0/0:20,0:10:21.07:0,21,663	0/0:24,0:13:2.97:0,3,78	0/0:71,0:57:99:0,108,3320	0/0:16,0:11:16.23:0,16,287	./.	0/0:34,0:28:69.17:0,69,2011	./.
chr10	102116143	.	TTAC	T	110.71	PASS	AB=0.722;AC=3;AF=0.068;AN=44;BaseQRankSum=3.319;DP=836;FS=0.000;HRun=0;HaplotypeScore=73.7999;InbreedingCoeff=0.1464;MQ=36.55;MQ0=199;MQRankSum=-2.798;QD=3.57;ReadPosRankSum=1.685;VQSLOD=1.1987;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:55,0:1:2.98:0,3,21	0/0:48,0:2:2.74:0,3,12	./.	0/0:31,0:17:11.70:0,12,177	0/0:60,0:44:69.24:0,69,1583	0/0:36,0:18:48.15:0,48,932	0/0:63,0:52:91.52:0,92,1974	0/0:55,0:24:63.13:0,63,1264	0/0:18,0:7:9.02:0,9,167	./.	0/0:2,0:1:3.01:0,3,48	0/0:50,0:46:94.20:0,94,1962	0/0:55,0:50:99:0,99,2083	./.	0/0:40,0:33:63.22:0,63,1461	0/1:8,5:12:99:183,0,154	0/0:21,0:5:15.05:0,15,354	0/0:19,0:11:24.05:0,24,422	0/0:81,0:53:45.13:0,45,1013	0/0:25,0:10:21.07:0,21,496	1/1:18,0:10:0.47:1,0,0	0/0:70,0:59:99:0,99,2231	0/0:16,0:9:17.76:0,18,300	0/0:5,0:1:3.01:0,3,42	0/0:47,0:34:75.13:0,75,1629	./.
chr10	102116158	.	CTGT	C	112.80	PASS	AB=0.688;AC=1;AF=0.025;AN=40;BaseQRankSum=3.801;DP=797;FS=1.851;HRun=0;HaplotypeScore=70.0149;InbreedingCoeff=0.2371;MQ=35.94;MQ0=223;MQRankSum=-2.846;QD=10.25;ReadPosRankSum=0.823;VQSLOD=2.7152;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	0/0:32,0:12:6.02:0,6,138	0/0:50,0:31:51.12:0,51,914	0/0:36,0:8:15.05:0,15,320	0/0:66,0:55:89.96:0,90,1821	0/0:48,0:19:57.16:0,57,1144	0/0:15,0:5:6.02:0,6,138	./.	0/0:2,0:1:3.01:0,3,57	0/0:48,0:44:76.49:0,76,1607	0/0:64,0:57:99:0,105,2190	./.	0/0:47,0:40:78.20:0,78,1550	0/1:5,5:10:0.99:185,0,1	0/0:23,0:6:15.02:0,15,280	0/0:17,0:11:8.98:0,9,116	0/0:83,0:50:42.08:0,42,890	0/0:23,0:11:21.07:0,21,483	0/0:9,0:4:3.90:0,4,70	0/0:64,0:53:99:0,102,2206	0/0:12,0:6:15.05:0,15,346	0/0:5,0:1:3.01:0,3,56	0/0:43,0:30:60.17:0,60,1182	./.
chr10	102116293	.	CTGT	C	112.37	PASS	AB=0.909;AC=5;AF=0.109;AN=46;BaseQRankSum=3.593;DP=802;FS=7.614;HRun=0;HaplotypeScore=96.2736;InbreedingCoeff=0.5717;MQ=40.87;MQ0=132;MQRankSum=-3.269;QD=5.35;ReadPosRankSum=-0.518;VQSLOD=1.6563;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,6:6:9.03:153,9,0	0/0:35,0:4:9.02:0,9,124	0/0:51,0:9:27.09:0,27,502	./.	0/0:30,0:24:38.99:0,39,621	0/0:48,0:46:99:0,108,2060	0/0:42,0:21:57.11:0,57,1069	0/0:56,0:54:99:0,132,2716	0/0:45,0:26:78.25:0,78,1661	0/0:24,0:15:30.07:0,30,613	./.	./.	0/0:56,0:56:99:0,126,2686	0/0:61,0:58:99:0,147,2999	0/0:4,1:2:3.01:0,3,69	0/0:43,0:41:96.25:0,96,2046	0/1:9,1:8:42:42,0,129	0/0:12,0:6:18.04:0,18,361	0/0:21,0:13:36.12:0,36,798	0/0:83,0:67:99:0,144,3051	0/0:26,0:14:21.07:0,21,400	0/0:20,0:15:30.03:0,30,490	0/0:55,0:53:99:0,150,3064	0/0:26,0:17:38.69:0,39,760	1/1:4,0:1:3:25,3,0	0/0:27,0:26:72.25:0,72,1557	./.
chr10	102118005	.	TACACACACACAC	T	2699.52	PASS	AB=0.750;AC=13;AF=0.232;AN=56;BaseQRankSum=6.666;DP=639;FS=0.662;HRun=0;HaplotypeScore=210.1555;InbreedingCoeff=0.8163;MQ=55.97;MQ0=12;MQRankSum=-8.584;QD=18.24;ReadPosRankSum=2.397;VQSLOD=2.1598;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,13:33:12.04:340,12,0	1/1:4,5:10:12.03:287,12,0	0/0:25,0:10:6.02:0,6,144	0/0:38,0:23:9.03:0,9,163	1/1:10,14:24:5.61:116,6,0	0/0:26,0:26:42.14:0,42,1939	0/0:24,0:25:36.08:0,36,1393	0/0:22,0:22:39.10:0,39,1116	0/0:21,0:21:45.15:0,45,2139	0/0:26,0:26:54.18:0,54,2373	0/0:18,0:21:37.94:0,38,1716	1/1:6,16:25:24.01:687,24,0	1/1:11,4:15:12.04:314,12,0	0/0:21,0:21:36.12:0,36,1700	0/0:8,0:17:18.06:0,18,665	1/1:7,14:21:27.09:869,27,0	0/0:13,0:16:13.28:0,13,383	0/1:12,1:18:99:266,0,192	0/0:12,0:17:33.11:0,33,1478	0/0:13,0:26:34.25:0,34,946	0/0:22,0:31:12.04:0,12,564	0/0:23,0:24:49.11:0,49,2239	0/0:19,0:20:39.61:0,40,2022	0/0:25,0:25:45.14:0,45,2158	0/0:17,0:19:33.11:0,33,1551	0/0:18,0:32:66.22:0,66,1700	0/0:14,0:22:24.55:0,25,1191	0/0:3,0:13:24.08:0,24,582
chr10	102118212	.	GA	G	2981.72	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.525;DP=504;FS=0.000;HRun=9;HaplotypeScore=66.7634;InbreedingCoeff=0.9471;MQ=64.48;MQ0=3;MQRankSum=0.302;QD=20.85;ReadPosRankSum=0.149;VQSLOD=3.9902;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:16:39.02:357,39,0	1/1:1,13:14:39.02:357,39,0	1/1:3,0:2:2.04:6,2,0	0/0:7,0:5:3.64:0,4,48	1/1:1,25:26:69.03:631,69,0	0/0:24,0:24:66.20:0,66,762	0/0:10,0:10:30.09:0,30,346	0/0:30,1:31:44.74:0,45,759	0/0:16,0:16:45.13:0,45,519	0/0:24,0:24:54.16:0,54,623	0/0:19,0:19:51.11:0,51,574	1/1:3,13:16:33.01:302,33,0	1/1:3,14:17:42.02:384,42,0	0/0:11,0:11:30.09:0,30,346	0/0:14,0:14:36.11:0,36,415	1/1:4,14:18:30.01:275,30,0	0/0:33,0:33:96.24:0,96,1077	0/0:21,0:21:51.15:0,51,588	0/0:21,0:18:45.12:0,45,511	0/0:21,0:21:54.12:0,54,608	0/0:19,0:19:54.16:0,54,623	0/0:23,0:23:57.16:0,57,649	0/0:12,0:12:33.10:0,33,381	0/0:24,0:24:60.18:0,60,692	0/0:12,0:12:30.08:0,30,339	1/1:1,23:24:69.04:631,69,0	0/0:19,0:19:48.06:0,48,509	1/1:0,9:9:27.01:246,27,0
chr10	102118880	.	G	GTCTA	10615.97	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-9.014;DP=562;FS=12.601;HRun=0;HaplotypeScore=91.8893;InbreedingCoeff=0.9164;MQ=85.61;MQ0=0;MQRankSum=-6.146;QD=57.38;ReadPosRankSum=1.913;VQSLOD=6.1549;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:78.27:2057,78,0	1/1:1,6:7:18.06:475,18,0	0/0:23,0:23:59.54:0,60,981	0/0:15,0:16:43.39:0,43,736	1/1:11,17:28:63.21:1551,63,0	0/0:19,0:19:57.20:0,57,1039	0/0:20,0:20:60.19:0,60,1074	0/0:31,0:31:72.25:0,72,1324	0/0:27,0:27:69.22:0,69,1240	0/0:36,0:36:99:0,99,1782	0/0:10,0:10:30.09:0,30,522	1/1:9,16:25:57.20:1504,57,0	1/1:6,10:16:39.13:963,39,0	0/1:12,0:12:9.50:10,0,534	0/0:18,0:18:45.14:0,45,796	1/1:9,16:25:60.21:1498,60,0	0/0:17,0:17:51.17:0,51,938	1/1:3,2:5:9.02:183,9,0	0/0:15,0:15:42.14:0,42,737	0/0:30,0:30:87.30:0,87,1592	0/0:17,0:17:33.10:0,33,570	0/0:17,0:17:48.16:0,48,849	0/0:21,0:21:63.22:0,63,1149	0/0:16,0:16:42.13:0,42,731	0/0:14,0:14:39.13:0,39,718	1/1:4,23:27:72.25:1901,72,0	0/0:30,0:30:81.28:0,81,1483	1/1:5,6:11:18.06:475,18,0
chr10	102118957	.	T	TCTC	15518.41	PASS	AB=0.950;AC=29;AF=0.518;AN=56;BaseQRankSum=1.837;DP=604;FS=0.310;HRun=0;HaplotypeScore=98.5597;InbreedingCoeff=0.9222;MQ=81.25;MQ0=0;MQRankSum=-7.584;QD=50.22;ReadPosRankSum=0.711;VQSLOD=7.0715;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,16:22:47.98:897,48,0	1/1:0,13:13:39.13:882,39,0	0/0:20,0:20:44.52:0,45,554	0/0:14,0:14:33.05:0,33,467	1/1:3,23:28:63.12:1296,63,0	0/0:27,0:27:78.25:0,78,1266	0/0:24,0:24:69.24:0,69,1145	1/1:4,22:28:72.16:1375,72,0	0/0:22,0:22:57.19:0,57,949	0/0:37,0:37:99:0,102,1608	0/0:23,0:23:69.19:0,69,1072	1/1:2,20:22:63.20:1383,63,0	1/1:1,20:22:60.21:1342,60,0	0/1:18,1:19:16.81:17,0,748	0/0:27,0:27:81.26:0,81,1323	1/1:3,28:31:84.25:1851,84,0	0/0:17,0:17:48.16:0,48,799	1/1:0,11:12:27.09:611,27,0	1/1:1,9:11:33:515,33,0	1/1:2,23:26:62.99:1274,63,0	1/1:1,18:19:48.10:1036,48,0	0/0:17,0:17:45.13:0,45,721	0/0:24,0:24:72.23:0,72,1166	0/0:17,0:17:45.15:0,45,748	0/0:26,0:26:75.14:0,75,1189	1/1:3,19:23:13.21:1230,13,0	1/1:0,28:28:72.25:1625,72,0	1/1:3,2:5:12.01:184,12,0
chr10	102120421	.	T	TTA	7333.83	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.214;DP=514;FS=1.204;HRun=0;HaplotypeScore=77.4821;InbreedingCoeff=0.9945;MQ=87.89;MQ0=0;MQRankSum=-6.296;QD=46.12;ReadPosRankSum=1.822;VQSLOD=6.2838;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:72.24:1324,72,0	1/1:2,8:10:27.05:461,27,0	0/0:24,0:24:66.20:0,66,975	0/0:13,0:13:28.80:0,29,465	1/1:1,30:31:75.25:1425,75,0	0/0:20,0:20:57.19:0,57,867	0/0:17,0:17:48.16:0,48,735	0/0:24,0:24:69.21:0,69,997	0/0:19,0:19:45.15:0,45,667	0/0:17,0:17:48.15:0,48,716	0/0:14,0:14:39.13:0,39,595	1/1:1,14:16:42.14:769,42,0	1/1:0,17:17:39.13:728,39,0	0/0:14,0:14:39.13:0,39,597	0/0:16,0:16:45.14:0,45,667	1/1:0,15:15:42.14:789,42,0	0/0:17,0:17:45.15:0,45,687	1/1:1,18:19:45.15:868,45,0	0/0:18,0:18:51.15:0,51,741	0/0:29,0:29:84.27:0,84,1246	0/0:17,0:17:48.16:0,48,735	0/0:23,0:23:66.21:0,66,985	0/0:18,0:18:54.18:0,54,827	0/0:8,0:8:24.08:0,24,365	0/0:31,0:31:93.30:0,93,1384	1/1:0,13:13:39.13:740,39,0	0/0:16,0:16:48.16:0,48,735	1/1:0,7:7:12.04:231,12,0
chr10	102120563	.	A	AT	6212.54	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-10.537;DP=550;FS=6.028;HRun=6;HaplotypeScore=51.3657;InbreedingCoeff=0.9992;MQ=78.75;MQ0=0;MQRankSum=-2.799;QD=33.22;ReadPosRankSum=3.237;VQSLOD=5.0241;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:66.21:830,66,0	1/1:1,10:11:27.09:340,27,0	0/0:14,0:14:39.05:0,39,385	0/0:11,0:11:23.38:0,23,210	1/1:2,26:29:75.24:944,75,0	0/0:24,0:24:69.13:0,69,695	0/0:18,0:18:48.11:0,48,490	0/0:29,0:28:72.16:0,72,735	0/0:22,0:22:66.15:0,66,673	0/0:21,0:21:54.11:0,54,547	0/0:17,0:17:48.11:0,48,490	1/1:2,14:16:42.13:528,42,0	1/1:5,19:24:63.18:775,63,0	0/0:12,0:12:36.08:0,36,367	0/0:13,0:13:36.08:0,36,367	1/1:1,17:18:51.10:607,51,0	0/0:38,0:38:96.18:0,96,970	1/1:1,24:25:66.21:830,66,0	0/0:22,0:22:60.14:0,60,612	0/0:26,0:26:63.14:0,63,641	0/0:15,0:15:45.08:0,45,451	0/0:20,0:20:54.12:0,54,551	0/0:21,0:21:60.12:0,60,605	0/0:16,0:16:48.09:0,48,482	0/0:15,0:15:39.08:0,39,392	1/1:0,23:23:66.21:830,66,0	0/0:9,0:9:27.06:0,27,275	1/1:0,14:14:42.13:528,42,0
chr10	102121241	.	TTATATAC	T	4290.32	PASS	AB=0.560;AC=17;AF=0.304;AN=56;BaseQRankSum=11.931;DP=410;FS=19.200;HRun=0;HaplotypeScore=104.9390;InbreedingCoeff=0.8813;MQ=67.07;MQ0=2;MQRankSum=-11.627;QD=46.63;ReadPosRankSum=-0.768;VQSLOD=3.1886;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:36.04:783,36,0	1/1:0,4:4:9.03:209,9,0	0/0:21,0:17:34.91:0,35,718	0/0:11,0:10:14.94:0,15,306	1/1:1,15:16:39.09:770,39,0	0/0:22,0:22:57.18:0,57,2003	0/0:14,0:14:42.14:0,42,1517	0/0:40,0:40:99:0,111,3603	0/0:22,0:22:57.18:0,57,1909	0/0:20,0:20:60.20:0,60,2157	0/0:16,0:16:48.14:0,48,1661	1/1:2,6:8:18.06:460,18,0	1/1:0,11:11:24.08:573,24,0	0/0:6,0:6:15.04:0,15,374	0/0:14,0:14:39.13:0,39,1452	1/1:1,8:9:18.03:404,18,0	0/0:20,0:20:57.20:0,57,2039	1/1:2,7:9:12.04:307,12,0	0/0:17,0:17:42.12:0,42,1159	0/0:17,0:17:48.15:0,48,1729	0/0:9,0:9:24.04:0,24,772	0/0:8,0:8:21.06:0,21,739	0/0:9,0:9:24.07:0,24,803	0/0:14,0:14:39.13:0,39,1332	0/0:20,0:20:57.18:0,57,2035	0/1:3,11:14:86.02:553,0,86	0/0:18,0:18:54.13:0,54,1719	1/1:0,3:3:9.03:230,9,0
chr10	102128545	.	A	AT	970.83	PASS	AC=10;AF=0.294;AN=34;BaseQRankSum=-4.498;DP=208;FS=10.601;HRun=0;HaplotypeScore=33.6752;InbreedingCoeff=0.7072;MQ=65.91;MQ0=36;MQRankSum=-1.235;QD=23.68;ReadPosRankSum=0.157;VQSLOD=3.9351;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:40,0:15:27.33:0,27,197	0/0:37,0:13:0.29:0,0,42	./.	0/0:9,0:7:20.99:0,21,247	0/0:2,0:2:5.97:0,6,48	1/1:2,16:16:48.08:556,48,0	./.	0/0:9,0:9:27.08:0,27,348	0/0:6,0:4:8.96:0,9,83	./.	./.	0/0:5,0:2:6.02:0,6,83	0/0:4,0:2:6.01:0,6,66	./.	0/0:18,0:16:36.51:0,37,494	./.	1/1:5,6:7:21.05:246,21,0	1/1:1,2:3:8.96:94,9,0	1/1:1,3:3:8.96:95,9,0	./.	0/0:3,0:1:3.01:0,3,42	0/0:2,0:2:3.01:0,3,42	0/0:14,0:11:19.53:0,20,259	./.	1/1:2,3:3:9.03:116,9,0	./.
chr10	102128688	.	T	TCA	3618.09	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=11.210;DP=424;FS=7.047;HRun=0;HaplotypeScore=79.3426;InbreedingCoeff=0.8677;MQ=75.54;MQ0=1;MQRankSum=-4.362;QD=26.80;ReadPosRankSum=4.533;VQSLOD=4.6796;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:31:66.56:905,67,0	1/1:1,1:2:2.03:39,2,0	0/0:13,0:11:10.90:0,11,250	0/1:13,0:11:12.08:12,0,154	1/1:1,15:18:41.72:544,42,0	0/0:13,0:13:39.12:0,39,611	0/0:12,0:12:33.10:0,33,512	0/0:24,0:24:72.20:0,72,1133	0/0:9,0:9:27.09:0,27,439	0/0:11,0:11:33.10:0,33,504	0/0:12,0:12:30.56:0,31,453	1/1:3,12:15:33.46:495,33,0	1/1:8,14:22:28.88:518,29,0	0/0:8,0:8:24.08:0,24,387	0/0:16,0:16:48.16:0,48,755	1/1:2,12:15:36.97:498,37,0	0/0:19,0:19:57.19:0,57,923	1/1:2,15:18:44.51:607,45,0	0/0:22,0:22:63.22:0,63,1020	0/0:18,0:18:54.18:0,54,863	0/0:17,0:17:51.17:0,51,807	0/0:8,0:8:24.08:0,24,377	0/0:6,0:6:18.06:0,18,293	0/0:13,0:13:39.13:0,39,634	0/0:15,0:15:45.15:0,45,717	0/0:28,0:28:65.98:0,66,514	0/0:13,0:13:39.13:0,39,620	0/0:12,0:12:35.83:0,36,270
chr10	102129988	.	A	AG	5580.27	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.856;DP=661;FS=28.384;HRun=5;HaplotypeScore=96.2030;InbreedingCoeff=0.9917;MQ=77.78;MQ0=0;MQRankSum=-8.111;QD=30.33;ReadPosRankSum=2.909;VQSLOD=2.9696;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,22:30:60.85:679,61,0	1/1:1,10:11:33.06:414,33,0	0/0:40,0:39:99:0,100,1045	0/0:23,0:21:51.09:0,51,548	1/1:5,16:21:39.49:467,39,0	0/0:18,0:17:51.10:0,51,532	0/0:33,0:33:84.21:0,84,903	0/0:14,0:14:36.08:0,36,380	0/0:29,0:29:78.13:0,78,816	0/0:24,0:24:60.11:0,60,633	0/0:20,0:20:54.11:0,54,571	1/1:3,17:20:51.17:671,51,0	1/1:2,25:27:72.19:918,72,0	0/0:26,0:26:71.39:0,71,749	0/0:31,0:31:81.20:0,81,868	1/1:4,24:28:13.75:877,14,0	0/0:26,0:25:75.15:0,75,788	1/1:2,12:14:36.12:488,36,0	0/0:28,0:28:66.14:0,66,701	0/0:25,0:25:66.13:0,66,696	0/0:39,0:39:99:0,102,1096	0/0:21,0:21:60.14:0,60,636	0/0:16,0:16:42.11:0,42,451	0/0:30,0:30:81.19:0,81,863	0/0:16,0:16:45.11:0,45,484	1/1:4,23:27:69.22:907,69,0	0/0:18,0:18:51.10:0,51,538	1/1:2,4:6:12.04:158,12,0
chr10	102135743	.	C	CT	1266.49	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.253;DP=557;FS=3.786;HRun=6;HaplotypeScore=60.1173;InbreedingCoeff=0.9692;MQ=76.14;MQ0=0;MQRankSum=-0.369;QD=30.15;ReadPosRankSum=-1.046;VQSLOD=3.9727;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:42.09:0,42,428	0/0:18,0:18:48.09:0,48,483	0/0:24,0:24:57.79:0,58,591	0/0:14,0:14:28.07:0,28,291	0/0:29,0:29:81.15:0,81,812	0/0:19,0:19:51.10:0,51,513	0/0:17,0:17:45.08:0,45,451	0/0:32,0:32:78.15:0,78,790	0/0:10,0:10:30.07:0,30,306	0/0:30,0:30:90.19:0,90,908	0/0:24,0:24:69.16:0,69,704	0/0:23,0:23:66.15:0,66,673	0/0:15,0:15:42.09:0,42,423	0/0:16,0:16:48.11:0,48,490	0/0:10,0:10:27.06:0,27,275	0/0:13,0:13:30.06:0,30,305	0/0:18,0:18:45.10:0,45,459	0/0:23,0:23:54.12:0,54,550	0/0:23,0:23:66.15:0,66,672	0/0:28,0:28:69.15:0,69,704	0/0:18,0:18:48.11:0,48,490	0/0:19,0:19:51.11:0,51,520	0/0:20,0:20:51.11:0,51,520	0/0:3,0:3:9.02:0,9,92	0/0:17,0:17:45.10:0,45,459	1/1:3,21:24:35.54:709,36,0	0/0:34,0:34:99:0,99,996	1/1:0,18:18:54.17:679,54,0
chr10	102136545	.	C	CTCTGTGTGTGTG	1863.16	PASS	AB=1.000;AC=10;AF=0.185;AN=54;BaseQRankSum=7.296;DP=439;FS=8.711;HRun=0;HaplotypeScore=146.0352;InbreedingCoeff=0.0441;MQ=48.01;MQ0=37;MQRankSum=-5.973;QD=16.06;ReadPosRankSum=0.859;VQSLOD=1.9672;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:17:62.61:145,0,63	0/0:6,0:5:5.61:0,6,102	0/0:20,0:6:6.01:0,6,117	0/0:38,0:8:15.41:0,15,265	0/1:11,0:11:0.07:0,0,0	0/0:18,0:17:35.16:0,35,959	0/0:14,0:13:23.91:0,24,647	0/1:11,0:9:8.46:8,0,36	0/0:20,0:19:42.13:0,42,1227	0/0:13,0:12:36.11:0,36,1138	0/0:17,0:17:29.68:0,30,981	0/0:9,4:15:7.80:0,8,48	0/1:12,0:12:99:116,0,101	0/0:22,0:22:42.12:0,42,1166	0/0:13,0:12:30.09:0,30,921	0/1:16,0:16:94.50:356,0,94	0/0:22,0:18:46.01:0,46,1391	0/0:5,0:3:7.23:0,7,53	0/1:9,0:8:99:163,0,146	0/0:22,0:21:0.78:0,1,2	./.	0/0:17,0:17:36.12:0,36,1206	0/0:19,0:16:36.12:0,36,1171	0/0:21,0:19:42.14:0,42,1319	0/0:6,0:5:12.04:0,12,404	0/1:17,0:17:99:491,0,535	1/1:7,0:7:6.02:189,6,0	0/1:13,0:11:57.31:529,0,57
chr10	102136557	.	C	CTGTGTGTGTGTGTGTGTGTGTG	5104.22	PASS	AB=0.822;AC=20;AF=0.357;AN=56;BaseQRankSum=5.252;DP=433;FS=2.297;HRun=0;HaplotypeScore=193.8898;InbreedingCoeff=0.6506;MQ=59.18;MQ0=30;MQRankSum=-8.070;QD=40.51;ReadPosRankSum=1.296;VQSLOD=4.2651;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:14:2.14:209,2,0	0/1:4,0:3:0.20:0,0,0	0/0:33,0:13:24:0,24,720	0/0:48,0:14:20.18:0,20,660	0/0:9,0:9:0.18:0,0,1	0/0:20,0:19:42.92:0,43,2095	0/0:11,0:10:20.84:0,21,1045	1/1:10,0:8:17.67:158,18,0	0/0:19,0:18:41.51:0,42,2228	0/0:14,0:13:39.13:0,39,2019	0/0:17,0:17:39.13:0,39,1942	0/0:12,0:11:1.06:0,1,1	0/1:3,4:9:29.02:181,0,29	0/0:19,0:19:42.02:0,42,1951	0/0:15,0:14:36.56:0,37,1772	0/1:12,0:12:99:876,0,166	0/0:19,0:15:42.85:0,43,1831	1/1:5,0:3:7.47:30,7,0	1/1:8,0:7:14.18:560,14,0	1/1:21,0:21:2.15:49,2,0	0/1:6,0:10:0:0,0,0	0/0:18,0:18:38.81:0,39,2095	0/0:19,0:17:39.03:0,39,2209	0/0:22,0:20:13.84:0,14,1624	0/0:12,0:12:27.09:0,27,1139	1/1:14,0:14:18.24:1331,18,0	1/1:6,0:6:6.49:413,6,0	1/1:10,0:9:18.66:1295,19,0
chr10	102136561	.	C	CTGTGTGTGTGTGTGTGTGTGTGTGTG	7226.08	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=6.166;DP=443;FS=2.014;HRun=0;HaplotypeScore=225.6593;InbreedingCoeff=0.6305;MQ=60.15;MQ0=26;MQRankSum=-8.741;QD=53.93;ReadPosRankSum=0.956;VQSLOD=4.2482;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:13:6.67:223,0,7	1/1:3,0:2:2.74:209,3,0	0/0:34,0:14:36.04:0,36,1046	0/0:49,0:15:33.98:0,34,930	0/0:11,0:11:0.36:0,0,1	0/0:19,0:18:42.14:0,42,2418	0/0:13,0:12:25.06:0,25,1261	1/1:9,0:9:20.93:474,21,0	0/0:19,0:18:36.27:0,36,2497	0/0:14,0:14:39.13:0,39,2439	0/0:18,0:18:45.14:0,45,2362	1/1:13,0:12:5.24:61,5,0	0/1:8,0:8:8.35:215,0,8	0/0:19,0:19:32.04:0,32,2217	0/0:16,0:15:36.12:0,36,2129	0/1:13,0:13:99:1091,0,177	0/0:19,0:15:8.39:0,8,1979	1/1:5,0:3:5.61:55,6,0	1/1:4,1:7:11.62:469,12,0	1/1:21,0:21:2.81:95,3,0	1/1:9,0:8:0.47:1,0,0	0/0:19,0:19:14.15:0,14,2471	0/0:21,0:19:48.15:0,48,2586	0/0:24,0:22:24.69:0,25,1867	0/0:14,0:14:39.12:0,39,1675	1/1:15,0:15:25.97:1770,26,0	1/1:6,0:6:6.39:488,6,0	1/1:9,0:9:23.91:2074,24,0
chr10	102136563	.	C	CTCTGTGTGTGTGTGTGTGTGTGTGTGTG	11383.02	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=7.167;DP=521;FS=0.502;HRun=0;HaplotypeScore=298.3292;InbreedingCoeff=0.7764;MQ=58.18;MQ0=23;MQRankSum=-11.100;QD=51.74;ReadPosRankSum=-0.673;VQSLOD=3.2253;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,3:21:5.21:454,5,0	1/1:7,0:6:3.01:220,3,0	0/0:36,0:15:39.08:0,39,1192	0/0:49,0:15:33.36:0,33,1026	1/1:20,0:20:4.06:44,4,0	0/0:17,0:18:42.14:0,42,2357	0/0:11,0:11:25.17:0,25,1308	1/1:22,0:22:51.03:1734,51,0	0/0:20,0:19:50.38:0,50,2525	0/0:16,0:16:45.14:0,45,2492	0/0:18,0:18:45.15:0,45,2430	1/1:17,0:16:5.72:121,6,0	1/1:13,0:13:8.96:436,9,0	0/0:19,0:19:45.57:0,46,2293	0/0:15,0:15:38.95:0,39,2177	0/1:20,0:20:99:1475,0,176	0/0:19,0:15:42:0,42,2024	1/1:5,0:3:6.01:91,6,0	1/1:8,0:7:12.03:598,12,0	1/1:26,0:25:3.09:120,3,0	1/1:13,0:12:3.27:21,3,0	0/0:20,0:20:45.07:0,45,2512	0/0:20,0:19:48.16:0,48,2616	0/0:26,0:24:51.05:0,51,2043	0/0:14,0:14:39.13:0,39,1876	1/1:21,0:21:45.95:2622,46,0	1/1:13,0:13:20.18:1072,20,0	1/1:12,0:12:33.58:2374,34,0
chr10	102138157	.	G	GT	7004.66	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=2.324;DP=641;FS=10.769;HRun=4;HaplotypeScore=63.8534;InbreedingCoeff=0.9997;MQ=79.45;MQ0=0;MQRankSum=-4.037;QD=36.87;ReadPosRankSum=2.222;VQSLOD=4.6157;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:33:87.29:1188,87,0	1/1:2,9:11:27.09:369,27,0	0/0:17,0:17:48.10:0,48,533	0/0:15,0:15:39.11:0,39,440	1/1:4,35:39:99:1384,102,0	0/0:25,0:24:69.16:0,69,761	0/0:18,0:18:54.15:0,54,612	0/0:25,0:25:72.16:0,72,794	0/0:18,0:18:45.13:0,45,510	0/0:37,0:37:96.27:0,96,1089	0/0:25,0:25:60.17:0,60,681	1/1:1,19:20:57.19:780,57,0	1/1:1,18:19:51.17:698,51,0	0/0:17,0:17:51.15:0,51,579	0/0:20,0:20:51.14:0,51,579	1/1:0,22:22:60.20:821,60,0	0/0:12,0:12:33.08:0,33,365	1/1:0,10:10:30.10:410,30,0	0/0:21,0:21:60.17:0,60,680	0/0:34,0:34:93.26:0,93,1054	0/0:23,0:23:57.14:0,57,636	0/0:25,0:25:69.18:0,69,772	0/0:33,0:33:99:0,99,1123	0/0:14,0:14:39.11:0,39,441	0/0:25,0:25:66.19:0,66,749	1/1:1,21:22:63.21:862,63,0	0/0:47,0:47:99:0,126,1429	1/1:0,14:14:36.12:492,36,0
chr10	102138536	.	T	TAC	2243.59	PASS	AB=0.825;AC=16;AF=0.308;AN=52;BaseQRankSum=-7.256;DP=568;FS=0.611;HRun=0;HaplotypeScore=116.4591;InbreedingCoeff=0.1411;MQ=56.08;MQ0=13;MQRankSum=6.119;QD=7.48;ReadPosRankSum=-1.551;VQSLOD=3.0451;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:16:10.21:0,10,39	0/0:2,0:4:5.68:0,6,28	./.	./.	0/0:14,0:25:31.15:0,31,151	0/1:28,0:28:38.42:241,0,38	1/1:16,2:18:4.40:241,4,0	0/0:11,0:11:2.84:0,3,14	0/1:17,4:20:32.91:203,0,33	0/0:16,0:16:5.76:0,6,40	0/0:12,0:14:6.48:0,6,133	0/0:4,0:13:16.91:0,17,80	0/0:10,0:19:18.13:0,18,87	0/1:11,5:16:26.72:39,0,27	1/1:9,6:19:14.92:222,15,0	0/1:13,1:18:24.52:25,0,82	0/1:26,12:42:48.85:445,0,49	0/1:24,0:26:8.04:195,0,8	0/0:20,0:18:8.61:0,9,45	0/0:14,0:20:17.04:0,17,84	0/0:17,0:18:0:0,0,0	1/1:20,12:32:9.03:123,9,0	0/1:11,11:23:14.67:206,0,15	1/1:15,14:32:11.46:383,11,0	0/1:16,6:23:23.71:80,0,24	0/0:10,0:16:17.04:0,17,84	0/0:8,0:14:17.20:0,17,95	0/0:5,0:5:2.84:0,3,14
chr10	102138593	.	T	TACAC	7759.27	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-0.873;DP=607;FS=5.431;HRun=0;HaplotypeScore=179.5960;InbreedingCoeff=0.9621;MQ=59.06;MQ0=3;MQRankSum=-9.160;QD=49.42;ReadPosRankSum=-3.535;VQSLOD=4.5338;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:24.06:0,24,377	0/0:9,0:9:17.97:0,18,259	0/0:32,0:25:15.31:0,15,670	0/0:27,0:21:38.95:0,39,649	0/0:29,0:29:72.05:0,72,1042	0/0:22,0:22:45.93:0,46,756	0/0:21,0:21:48.16:0,48,837	1/1:6,25:31:78.24:1710,78,0	0/0:24,0:24:48.16:0,48,808	0/0:19,0:19:45.54:0,46,810	0/0:13,0:13:33.11:0,33,567	0/0:20,0:20:42.07:0,42,670	0/0:17,0:18:48.07:0,48,720	0/0:11,0:11:27.08:0,27,437	0/0:23,0:23:54.06:0,54,856	0/0:25,0:25:51.12:0,51,837	0/0:26,0:26:48.15:0,48,806	0/0:22,0:22:58.05:0,58,978	1/1:17,6:23:60.02:1187,60,0	1/1:12,22:34:63.22:1479,63,0	1/1:5,17:24:42.14:1036,42,0	0/0:16,0:16:36.05:0,36,583	0/0:19,0:19:30.01:0,30,529	0/0:33,0:33:69.15:0,69,1134	0/0:21,0:21:21.25:0,21,810	1/1:8,9:18:37.87:779,38,0	1/1:6,17:23:63.22:1491,63,0	1/1:3,1:4:3.01:77,3,0
chr10	102138619	.	T	TAC	1813.45	PASS	AB=0.985;AC=23;AF=0.426;AN=54;BaseQRankSum=3.813;DP=583;FS=1.054;HRun=0;HaplotypeScore=164.2480;InbreedingCoeff=0.6748;MQ=53.89;MQ0=8;MQRankSum=0.672;QD=6.74;ReadPosRankSum=-0.833;VQSLOD=3.1702;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:22:25.73:223,26,0	1/1:11,0:11:18.62:170,19,0	1/1:27,0:19:0.47:1,0,0	./.	1/1:24,0:24:23.97:194,24,0	0/0:24,0:24:18.20:0,18,343	0/0:20,0:20:23.71:0,24,220	1/1:18,0:16:5.58:33,6,0	1/1:6,13:19:21.03:294,21,0	0/0:26,0:26:43.98:0,44,416	0/0:18,0:17:21.05:0,21,232	1/1:17,0:17:18.11:154,18,0	1/1:24,0:24:35.29:331,35,0	0/0:13,0:14:28.71:0,29,272	0/0:21,0:21:34.78:0,35,375	1/1:25,1:26:35.89:363,36,0	0/0:30,0:30:61.91:0,62,609	0/1:23,0:23:4.02:193,0,4	0/0:15,0:15:8.47:0,8,41	0/0:28,0:28:31.25:0,31,150	1/1:19,0:20:2.98:22,3,0	0/1:19,1:21:23.35:23,0,180	0/0:15,0:15:26.77:0,27,274	0/0:31,0:32:53.56:0,54,589	0/0:20,0:21:36.18:0,36,343	0/1:15,0:15:7.97:8,0,24	0/0:20,0:20:4.13:0,4,72	0/0:3,0:3:2.97:0,3,20
chr10	102138642	.	ACACACACACAAAC	A	2085.88	PASS	AB=0.909;AC=6;AF=0.107;AN=56;BaseQRankSum=7.385;DP=671;FS=5.290;HRun=0;HaplotypeScore=270.3466;InbreedingCoeff=0.2297;MQ=50.58;MQ0=18;MQRankSum=-5.776;QD=17.24;ReadPosRankSum=2.163;VQSLOD=2.1808;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:25.15:0,25,1267	0/0:12,0:12:7.20:0,7,927	0/0:29,0:12:29.37:0,29,351	0/0:26,0:8:21.04:0,21,223	0/0:26,0:26:45.15:0,45,1711	0/0:27,0:27:69.99:0,70,3018	0/0:23,0:21:60.20:0,60,2092	0/1:22,0:19:14.60:15,0,114	0/0:29,0:28:54.14:0,54,1975	0/0:27,0:27:79.15:0,79,3572	0/0:21,0:20:51.64:0,52,2041	0/0:22,0:22:37.20:0,37,1100	0/0:22,0:22:54.09:0,54,1958	0/0:19,0:19:54.19:0,54,2457	0/0:23,0:23:56.24:0,56,2855	0/0:33,0:33:49.62:0,50,1573	0/0:32,0:32:93.32:0,93,4322	0/0:21,0:21:58.92:0,59,1819	0/1:20,2:18:99:286,0,164	1/1:18,10:28:34.37:1148,34,0	0/1:23,1:22:21.54:33,0,22	0/0:25,0:24:53.89:0,54,2374	0/0:19,0:18:51.16:0,51,2076	0/0:32,0:32:79.11:0,79,3807	0/0:24,0:24:69.69:0,70,2972	0/0:19,0:19:56.95:0,57,893	0/1:17,7:24:81.11:734,0,81	0/0:5,0:5:5.89:0,6,150
chr10	102138653	.	AAC	A	3783.47	PASS	AB=0.969;AC=23;AF=0.411;AN=56;BaseQRankSum=7.703;DP=675;FS=6.675;HRun=0;HaplotypeScore=144.4539;InbreedingCoeff=0.6054;MQ=53.81;MQ0=18;MQRankSum=-3.849;QD=11.40;ReadPosRankSum=-0.596;VQSLOD=3.0239;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:34,3:35:17.51:94,0,18	1/1:12,0:12:15.76:63,16,0	0/1:27,1:13:14.43:14,0,215	0/0:27,0:10:15.09:0,15,146	0/1:29,0:29:39.56:137,0,40	0/0:28,0:28:54.15:0,54,820	0/0:22,0:20:45.03:0,45,648	1/1:16,8:21:55.40:642,55,0	0/0:28,0:27:54.16:0,54,812	0/0:30,0:30:21.24:0,21,767	0/0:20,0:19:42.13:0,42,641	1/1:21,0:21:20.62:289,21,0	1/1:23,0:23:30.59:268,31,0	0/0:22,0:22:48.07:0,48,696	0/0:24,0:24:50.13:0,50,793	1/1:30,0:30:24.11:110,24,0	0/0:33,0:33:74.88:0,75,1095	0/1:19,1:20:11.06:194,0,11	1/1:7,16:19:54.04:573,54,0	1/1:21,2:23:69.11:771,69,0	1/1:15,2:15:20.63:203,21,0	0/0:25,0:24:7.54:0,8,615	0/0:21,0:20:47.97:0,48,695	0/0:34,0:34:66.19:0,66,1006	0/0:21,0:21:48.08:0,48,723	0/1:24,0:24:16.85:17,0,17	1/1:9,11:19:40.80:407,41,0	0/0:8,0:8:3.48:0,3,39
chr10	102139717	.	T	TTAA	740.76	PASS	AB=0.640;AC=3;AF=0.054;AN=56;BaseQRankSum=-3.843;DP=464;FS=0.969;HRun=0;HaplotypeScore=64.5703;InbreedingCoeff=0.5047;MQ=64.72;MQ0=2;MQRankSum=-0.296;QD=26.46;ReadPosRankSum=-0.516;VQSLOD=3.5138;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:63.18:0,63,870	0/0:11,0:11:33.07:0,33,419	0/0:8,0:9:12.02:0,12,138	0/0:9,0:7:11.83:0,12,120	0/0:29,0:29:75.20:0,75,1007	0/0:26,0:26:66.19:0,66,911	0/0:8,0:8:21.05:0,21,282	0/0:32,0:32:66.16:0,66,819	0/0:17,0:17:30.09:0,30,413	0/0:23,0:23:54.17:0,54,755	0/0:19,0:19:42.11:0,42,567	0/0:15,0:15:39.11:0,39,542	0/0:15,0:15:36.12:0,36,518	0/0:22,0:22:42.13:0,42,582	0/0:15,0:15:36.09:0,36,482	0/0:15,0:15:27.09:0,27,389	0/0:27,0:27:75.13:0,75,1013	0/0:17,0:17:23.30:0,23,517	0/0:22,0:19:45.11:0,45,576	0/0:17,0:17:33.09:0,33,440	0/0:6,0:6:18.04:0,18,238	0/0:3,0:3:3.01:0,3,43	0/0:3,0:3:6.02:0,6,86	0/0:7,0:7:8.99:0,9,106	0/0:18,0:18:45.14:0,45,629	0/1:7,8:16:13.10:481,0,13	0/0:23,0:22:60.17:0,60,823	1/1:6,6:12:18.06:362,18,0
chr10	102140198	.	TA	T	4058.31	PASS	AB=0.726;AC=27;AF=0.482;AN=56;BaseQRankSum=8.797;DP=568;FS=4.483;HRun=11;HaplotypeScore=69.7945;InbreedingCoeff=0.8031;MQ=69.27;MQ0=5;MQRankSum=-0.259;QD=13.66;ReadPosRankSum=3.150;VQSLOD=4.0946;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,23:28:62.89:517,63,0	0/1:3,5:8:8.10:105,0,8	0/0:30,0:18:16.14:0,16,244	0/1:34,1:16:13.77:14,0,94	1/1:2,12:14:14.90:123,15,0	0/0:15,1:16:14.43:0,14,345	0/0:18,1:19:17.45:0,17,384	1/1:2,18:20:44.92:369,45,0	0/0:19,0:19:45.11:0,45,473	0/0:29,0:30:74.97:0,75,755	0/0:18,0:19:44.95:0,45,462	1/1:6,13:19:29.95:246,30,0	1/1:6,15:22:43.94:350,44,0	0/0:19,0:19:51.07:0,51,504	0/0:16,0:17:41.97:0,42,424	1/1:4,12:16:29.94:246,30,0	0/0:26,0:26:69.14:0,69,720	1/1:4,13:17:10.49:224,10,0	1/1:4,10:15:28.97:228,29,0	1/1:4,19:23:34.18:442,34,0	1/1:3,18:21:41.93:345,42,0	0/0:14,1:16:17.29:0,17,374	0/0:14,0:14:33.04:0,33,319	0/0:22,1:23:35.47:0,35,561	0/0:20,1:22:53.94:0,54,539	1/1:6,22:29:58.91:470,59,0	0/1:6,8:14:4.03:127,0,4	1/1:2,10:13:31.99:252,32,0
chr10	102140346	.	GGAA	G	91.09	PASS	AB=0.727;AC=1;AF=0.018;AN=56;BaseQRankSum=3.221;DP=363;FS=1.692;HRun=0;HaplotypeScore=67.7203;InbreedingCoeff=-0.0190;MQ=66.51;MQ0=9;MQRankSum=-1.327;QD=11.39;ReadPosRankSum=1.577;VQSLOD=3.0872;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:45.15:0,45,920	0/0:5,0:5:8.74:0,9,145	0/0:25,0:10:22.44:0,22,283	0/0:27,1:12:17.90:0,18,179	0/0:7,0:7:15.05:0,15,284	0/0:14,0:14:33.10:0,33,637	0/0:12,0:11:30.07:0,30,574	0/0:17,0:17:30.97:0,31,513	0/0:8,0:8:17.31:0,17,377	0/0:19,0:19:42.13:0,42,800	0/0:8,0:8:21.07:0,21,442	0/0:6,0:6:9.03:0,9,188	0/0:8,0:8:15.05:0,15,296	0/0:10,0:10:30.10:0,30,608	0/0:12,0:12:33.05:0,33,593	0/0:10,0:9:18.05:0,18,340	0/0:8,0:7:2.32:0,2,221	0/1:5,3:8:17.46:165,0,17	0/0:10,0:10:24.07:0,24,432	0/0:11,0:11:24.08:0,24,450	0/0:23,0:23:12.03:0,12,199	0/0:17,0:17:42.09:0,42,840	0/0:10,0:10:27.09:0,27,568	0/0:13,0:12:27.09:0,27,567	0/0:20,0:20:56.65:0,57,1103	0/0:26,0:26:68.55:0,69,667	0/0:5,0:5:9.03:0,9,188	0/0:4,0:4:10.45:0,10,71
chr10	102140376	.	AGAGGAGGAG	A	1087.18	PASS	AB=1.000;AC=5;AF=0.109;AN=46;BaseQRankSum=5.662;DP=284;FS=58.930;HRun=0;HaplotypeScore=78.0179;InbreedingCoeff=0.4276;MQ=55.13;MQ0=31;MQRankSum=-2.648;QD=25.89;ReadPosRankSum=2.078;VQSLOD=0.2679;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:20.19:0,20,113	0/0:4,0:4:5.99:0,6,50	./.	./.	0/0:5,0:3:3:0,3,25	0/0:10,0:8:6.02:0,6,121	0/0:13,0:9:15.04:0,15,296	0/0:7,0:4:0:0,0,0	0/0:10,0:10:9.03:0,9,245	0/0:12,0:13:18.06:0,18,514	./.	0/0:4,0:3:3.01:0,3,49	0/0:2,0:2:0.47:0,0,1	0/0:9,0:8:12.02:0,12,315	0/0:9,0:9:15.05:0,15,571	1/1:8,0:7:1.84:18,2,0	0/0:14,0:10:21.07:0,21,467	0/0:6,0:6:3.01:0,3,80	./.	0/0:9,0:9:0.47:0,0,2	0/0:21,0:19:3:0,3,25	0/0:13,0:13:18.06:0,18,673	0/0:8,0:8:9.49:0,9,186	0/0:11,0:9:9:0,9,109	0/0:18,0:18:27.09:0,27,913	1/1:22,7:27:48.13:1028,48,0	./.	0/1:5,0:5:6.21:149,0,6
chr10	102144498	.	A	AG	1762.63	PASS	AB=0.923;AC=12;AF=0.214;AN=56;BaseQRankSum=15.278;DP=664;FS=260.488;HRun=0;HaplotypeScore=245.3678;InbreedingCoeff=-0.2701;MQ=79.68;MQ0=0;MQRankSum=-14.353;QD=5.56;ReadPosRankSum=2.971;VQSLOD=-0.6594;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:13.08:0,13,1140	0/1:13,0:13:71.38:71,0,248	0/0:20,0:21:56.31:0,56,767	0/0:23,0:23:66.13:0,66,861	0/1:32,0:32:99:184,0,508	0/0:24,0:24:72.21:0,72,972	0/0:20,0:20:60.18:0,60,817	0/1:34,6:40:99:127,0,1207	0/0:27,0:27:78.22:0,78,1053	0/0:29,0:29:84.27:0,84,1158	0/0:19,0:19:57.19:0,57,796	0/1:32,0:32:99:143,0,670	0/1:31,0:31:67.42:67,0,809	0/0:22,0:22:60.20:0,60,835	0/0:23,0:23:69.22:0,69,947	0/1:18,0:18:99:101,0,389	0/0:18,0:18:54.18:0,54,749	0/1:17,0:17:10.15:10,0,536	0/1:13,6:19:99:184,0,454	0/1:15,14:29:99:570,0,442	0/0:10,1:11:24.08:0,24,335	0/0:15,0:15:45.15:0,45,628	0/0:16,0:16:48.15:0,48,656	0/0:14,0:14:42.14:0,42,585	0/0:27,0:27:81.27:0,81,1132	0/1:42,0:42:71.52:72,0,1136	0/1:24,10:34:99:372,0,901	0/1:10,0:10:12.60:13,0,305
chr10	102144685	.	T	TA	9382.88	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=16.772;DP=546;FS=12.586;HRun=1;HaplotypeScore=107.9976;InbreedingCoeff=0.9800;MQ=67.26;MQ0=0;MQRankSum=-11.783;QD=38.14;ReadPosRankSum=-2.029;VQSLOD=2.8453;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:63.13:893,63,0	1/1:1,6:7:18.06:269,18,0	0/0:11,0:10:14.53:0,15,194	0/0:16,0:14:27.89:0,28,278	1/1:0,14:14:33.07:469,33,0	0/0:26,0:26:78.25:0,78,1012	0/0:13,0:13:39.11:0,39,492	1/1:13,39:52:99:2087,147,0	0/0:15,0:15:45.13:0,45,570	0/0:41,0:41:99:0,120,1557	0/0:35,0:35:99:0,105,1362	1/1:1,16:17:48.16:719,48,0	1/1:0,13:13:36.12:539,36,0	0/0:20,0:20:60.19:0,60,779	0/0:12,0:12:36.12:0,36,467	1/1:1,15:16:39.13:584,39,0	0/0:22,0:22:66.21:0,66,857	1/1:0,5:5:6.02:90,6,0	1/1:1,16:17:48.16:712,48,0	1/1:0,16:16:45.11:647,45,0	1/1:2,9:11:18.06:269,18,0	0/0:19,0:19:57.19:0,57,739	0/0:28,0:28:84.26:0,84,1075	0/0:10,0:10:21.05:0,21,259	0/0:32,0:32:96.31:0,96,1247	1/1:1,26:27:78.26:1161,78,0	1/1:0,14:14:39.13:584,39,0	1/1:1,9:10:24.08:360,24,0
chr10	102146011	.	T	TTGTTGC	9950.58	PASS	AB=0.556;AC=27;AF=0.482;AN=56;BaseQRankSum=10.050;DP=620;FS=16.730;HRun=0;HaplotypeScore=157.1796;InbreedingCoeff=0.9113;MQ=78.71;MQ0=0;MQRankSum=-15.049;QD=40.61;ReadPosRankSum=-2.717;VQSLOD=3.0918;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:27.09:765,27,0	1/1:1,14:15:21.07:666,21,0	0/0:33,0:31:84.07:0,84,1443	0/0:25,0:25:56.69:0,57,973	1/1:6,18:24:27.56:745,28,0	0/0:24,0:24:63.19:0,63,1344	0/0:29,0:29:78.21:0,78,1566	1/1:9,22:31:80.13:1356,80,0	0/0:30,0:30:87.27:0,87,1817	0/0:31,0:31:84.28:0,84,1870	0/0:22,0:22:63.22:0,63,1394	1/1:5,18:24:32.70:994,33,0	1/1:2,16:19:27.09:883,27,0	0/0:23,0:23:63.21:0,63,1388	0/0:37,0:37:99:0,102,2224	1/1:6,11:17:22.32:704,22,0	0/0:23,0:23:63.13:0,63,1190	1/1:1,2:3:5.99:126,6,0	1/1:16,0:15:29.12:493,29,0	1/1:6,14:19:18.49:491,18,0	1/1:13,0:13:26.62:280,27,0	0/0:26,0:26:69.18:0,69,1462	0/0:18,0:18:45.15:0,45,1037	0/0:31,0:31:84.27:0,84,1861	0/0:23,0:23:66.22:0,66,1362	0/1:4,16:20:17.86:1284,0,18	1/1:2,13:15:20.82:798,21,0	1/1:10,1:11:20.20:367,20,0
chr10	102146723	.	TA	T	5619.43	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.658;DP=759;FS=3.492;HRun=1;HaplotypeScore=75.4837;InbreedingCoeff=0.9994;MQ=86.68;MQ0=0;MQRankSum=-4.579;QD=39.57;ReadPosRankSum=-2.322;VQSLOD=4.5713;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,162,2514	0/0:10,0:10:30.10:0,30,480	0/0:24,1:25:50.66:0,51,1059	0/0:30,0:30:86.26:0,86,1225	0/0:32,0:32:96.29:0,96,1504	0/0:30,0:30:90.26:0,90,1367	0/0:23,0:23:66.21:0,66,1016	1/1:1,32:33:93.30:1283,93,0	0/0:35,0:35:99:0,105,1651	0/0:22,0:22:66.22:0,66,1032	0/0:13,0:13:36.12:0,36,575	0/0:31,0:31:90.28:0,90,1392	0/0:28,0:28:84.26:0,84,1310	0/0:25,0:25:75.21:0,75,1148	0/0:29,0:29:87.30:0,87,1387	0/0:27,0:27:81.22:0,81,1240	0/0:21,0:21:63.19:0,63,982	0/0:15,0:15:45.15:0,45,705	1/1:0,26:26:78.25:1072,78,0	1/1:0,24:24:66.22:916,66,0	1/1:0,20:20:57.19:797,57,0	0/0:31,0:31:93.32:0,93,1482	0/0:25,0:25:75.26:0,75,1197	0/0:24,0:24:69.24:0,69,1097	0/0:38,0:38:99:0,114,1821	0/0:41,0:41:99:0,123,1938	1/1:0,39:39:99:1552,111,0	0/0:8,0:8:24.08:0,24,384
chr10	102147307	.	A	AT	16666.22	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=22.705;DP=881;FS=5.349;HRun=2;HaplotypeScore=176.0722;InbreedingCoeff=0.9989;MQ=74.77;MQ0=1;MQRankSum=-7.101;QD=36.07;ReadPosRankSum=2.692;VQSLOD=4.1259;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,48:50:99:1963,141,0	1/1:2,11:13:36.03:482,36,0	0/0:42,0:41:99:0,120,1473	0/0:33,0:33:81.20:0,81,946	1/1:4,32:36:99:1392,102,0	0/0:25,0:25:66.21:0,66,818	0/0:23,0:23:66.21:0,66,818	1/1:10,21:31:78:1025,78,0	0/0:32,0:32:96.29:0,96,1177	0/0:32,0:32:93.27:0,93,1124	0/0:21,0:21:63.17:0,63,756	1/1:1,34:35:98.88:1342,99,0	1/1:2,31:33:90.23:1248,90,0	0/0:31,0:31:90.28:0,90,1116	0/0:31,0:31:84.26:0,84,1041	1/1:3,35:38:99:1465,108,0	0/0:28,0:27:78.24:0,78,967	1/1:5,20:24:63.17:849,63,0	1/1:3,15:18:48.12:629,48,0	1/1:5,38:43:99:1591,117,0	1/1:9,44:53:99:1718,129,0	0/0:25,0:25:75.24:0,75,930	0/0:34,0:34:99:0,102,1252	0/0:42,0:42:99:0,126,1546	0/0:19,0:19:54.15:0,54,655	1/1:6,26:33:55.56:1142,56,0	1/1:1,42:41:99:1566,111,0	1/1:0,10:10:18.06:254,18,0
chr10	102147309	.	TC	T	6391.16	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=23.804;DP=878;FS=4.800;HRun=1;HaplotypeScore=209.6531;InbreedingCoeff=0.9983;MQ=75.31;MQ0=1;MQRankSum=-4.638;QD=14.05;ReadPosRankSum=4.494;VQSLOD=4.8235;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:50,2:51:99:707,117,0	1/1:11,1:12:34.56:210,35,0	0/0:42,0:41:99:0,123,1900	0/0:33,0:32:83.43:0,83,1230	1/1:32,3:35:97.05:545,97,0	0/0:26,0:26:75.24:0,75,1170	0/0:22,0:22:66.23:0,66,1053	1/1:24,4:28:70.48:481,70,0	0/0:35,0:35:99:0,105,1606	0/0:33,0:33:99:0,99,1523	0/0:22,0:22:66.20:0,66,1009	1/1:36,0:37:82.24:484,82,0	1/1:30,1:31:86.18:480,86,0	0/0:31,0:31:90.31:0,90,1438	0/0:29,0:29:87.30:0,87,1386	1/1:37,1:38:99:580,104,0	0/0:27,0:26:81.28:0,81,1284	1/1:22,2:23:43.26:328,43,0	1/1:16,1:17:37.89:249,38,0	1/1:42,2:44:68.57:579,69,0	1/1:48,4:52:53.10:663,53,0	0/0:26,0:26:78.25:0,78,1223	0/0:35,0:35:99:0,102,1628	0/0:44,0:44:99:0,132,2032	0/0:18,0:18:54.18:0,54,863	1/1:29,4:33:23.67:469,24,0	1/1:42,0:40:99:529,104,0	1/1:10,0:10:17.10:87,17,0
chr10	102148228	.	TCACA	T	1303.96	PASS	AB=0.972;AC=15;AF=0.268;AN=56;BaseQRankSum=6.639;DP=532;FS=8.834;HRun=0;HaplotypeScore=111.1521;InbreedingCoeff=0.6690;MQ=61.31;MQ0=12;MQRankSum=-1.226;QD=8.05;ReadPosRankSum=2.539;VQSLOD=1.7980;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,14:30:23.88:266,24,0	1/1:2,3:5:9.03:141,9,0	0/0:26,0:19:3.48:0,3,44	0/0:20,0:12:6.02:0,6,76	1/1:15,4:20:9.03:142,9,0	0/0:19,0:17:14.84:0,15,298	0/0:17,0:17:14.76:0,15,246	0/0:21,0:21:18.06:0,18,294	0/0:21,0:21:32.84:0,33,692	0/0:18,0:18:41.87:0,42,820	0/0:16,0:16:21.25:0,21,372	1/1:14,9:24:8.98:364,9,0	1/1:14,3:18:23.97:285,24,0	0/1:20,1:19:11.36:11,0,688	0/0:20,0:19:39.07:0,39,830	1/1:7,8:15:18.01:255,18,0	0/0:24,0:24:30.09:0,30,652	0/0:13,0:12:15.05:0,15,262	0/0:18,0:18:12.51:0,13,208	0/0:12,0:12:6.02:0,6,101	0/1:8,0:6:0:0,0,0	0/0:26,0:26:24.08:0,24,570	0/0:21,0:21:24.05:0,24,515	0/0:30,0:29:41.88:0,42,888	0/1:18,0:18:16.69:17,0,416	0/0:19,0:19:23.60:0,24,351	0/0:23,0:20:14.13:0,14,251	0/0:5,0:5:6.02:0,6,101
chr10	102148268	.	AGAAGAG	A	857.55	PASS	AB=0.953;AC=20;AF=0.385;AN=52;BaseQRankSum=7.612;DP=541;FS=10.603;HRun=0;HaplotypeScore=171.2236;InbreedingCoeff=0.2869;MQ=43.09;MQ0=43;MQRankSum=-1.170;QD=3.24;ReadPosRankSum=-0.626;VQSLOD=2.1393;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:4.24:13,4,0	1/1:9,0:8:9.35:115,9,0	./.	./.	1/1:32,0:32:2.57:7,3,0	0/1:22,0:21:28.64:29,0,171	0/1:13,0:13:64.88:65,0,110	0/0:18,0:17:3.94:0,4,120	0/0:24,0:24:46.29:0,46,948	0/0:28,0:25:31.35:0,31,757	0/0:13,0:13:8.91:0,9,540	1/1:29,0:29:11.23:102,11,0	1/1:20,0:20:31.85:423,32,0	0/0:22,0:19:25.68:0,26,599	0/0:24,0:23:32.50:0,33,871	1/1:19,0:19:6.64:75,7,0	0/0:30,0:29:50.45:0,50,1156	0/0:12,0:11:1.52:0,2,238	0/0:12,0:12:23.40:0,23,473	0/0:9,0:8:4.28:0,4,19	0/0:15,0:10:1.82:0,2,6	0/1:22,0:23:33.46:33,0,359	0/1:11,4:15:36.09:36,0,186	0/0:28,0:26:40.54:0,41,768	0/1:19,0:18:25.50:25,0,651	0/1:25,0:24:37.18:37,0,121	0/0:21,0:17:24.91:0,25,439	1/1:12,0:10:1.33:62,1,0
chr10	102148269	.	GAAGAGA	G	2012.04	PASS	AB=0.936;AC=22;AF=0.423;AN=52;BaseQRankSum=7.719;DP=535;FS=3.389;HRun=0;HaplotypeScore=165.2509;InbreedingCoeff=0.3046;MQ=43.14;MQ0=44;MQRankSum=-5.260;QD=6.99;ReadPosRankSum=-0.495;VQSLOD=2.4767;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,2:25:13.04:102,13,0	1/1:4,2:8:14.91:185,15,0	./.	./.	1/1:7,24:31:11.96:97,12,0	0/1:22,0:21:6.46:6,0,108	0/0:13,0:13:2.44:0,2,90	0/1:17,0:16:74.93:177,0,75	0/0:24,0:24:53.67:0,54,973	0/0:26,0:23:44.54:0,45,760	0/0:13,0:13:19.71:0,20,539	1/1:21,6:28:36.13:304,36,0	1/1:7,12:20:38.34:591,38,0	0/0:22,0:19:16.35:0,16,559	0/0:26,0:24:36.15:0,36,829	1/1:8,9:19:33.32:317,33,0	0/0:29,0:28:72.02:0,72,1351	0/1:12,0:11:83.76:84,0,143	0/1:11,0:11:13.96:14,0,507	0/0:9,0:8:2.05:0,2,16	0/0:15,0:10:1.82:0,2,6	0/0:17,6:23:13.74:0,14,187	0/1:15,0:14:37.98:38,0,87	0/0:28,0:26:53.79:0,54,768	0/1:19,0:18:2.81:3,0,614	0/1:5,0:24:76.17:198,0,76	0/1:21,0:17:12:12,0,424	1/1:6,0:10:5.98:63,6,0
chr10	102148270	.	A	AC	238.49	PASS	AB=0.914;AC=7;AF=0.135;AN=52;BaseQRankSum=7.308;DP=537;FS=0.000;HRun=0;HaplotypeScore=147.2495;InbreedingCoeff=0.0968;MQ=42.75;MQ0=45;MQRankSum=-3.420;QD=2.65;ReadPosRankSum=-0.898;VQSLOD=2.5937;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:11.89:0,12,91	0/0:9,0:8:9.53:0,10,62	./.	./.	0/0:30,0:31:8.98:0,9,74	0/0:14,0:21:17.77:0,18,184	0/0:7,0:12:20.69:0,21,194	0/0:18,0:17:45:0,45,506	0/0:18,0:24:56.99:0,57,690	0/0:26,0:23:66.10:0,66,854	0/0:13,0:13:27.04:0,27,364	0/0:27,0:27:13.89:0,14,121	0/1:19,0:19:20.23:20,0,44	0/0:22,0:19:39.08:0,39,501	0/0:24,0:24:51.09:0,51,646	0/0:19,0:19:16.59:0,17,160	0/0:29,0:28:71.50:0,71,815	0/1:14,1:13:89.15:124,0,89	0/1:11,1:11:7.71:8,0,169	1/1:6,3:9:5.79:67,6,0	0/0:13,1:10:2.88:0,3,39	0/0:21,0:23:24.53:0,25,332	0/0:15,0:14:20.56:0,21,256	0/0:25,0:24:45.05:0,45,564	0/0:19,0:18:38.81:0,39,450	0/0:26,0:25:17.93:0,18,383	0/1:16,6:18:82.14:82,0,120	0/1:11,1:10:13.35:61,0,13
chr10	102148314	.	G	GAGAGATAC	7998.71	PASS	AB=0.933;AC=23;AF=0.411;AN=56;BaseQRankSum=-1.487;DP=546;FS=6.425;HRun=0;HaplotypeScore=163.7206;InbreedingCoeff=0.4837;MQ=68.89;MQ0=12;MQRankSum=-3.382;QD=28.36;ReadPosRankSum=-2.654;VQSLOD=3.6945;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:23:33.11:504,33,0	0/1:8,0:8:19.46:190,0,19	0/0:23,0:15:32.39:0,32,660	0/0:32,0:23:41.26:0,41,698	1/1:16,0:16:33.08:455,33,0	0/0:19,0:19:48.10:0,48,693	0/0:17,0:17:45.15:0,45,782	1/1:31,0:30:75.61:1127,76,0	0/0:26,0:26:69.21:0,69,1303	0/0:17,0:17:47.79:0,48,822	0/0:13,0:13:27.09:0,27,554	0/1:17,0:17:25.47:444,0,25	0/1:18,0:18:49.83:426,0,50	0/0:16,0:16:38.81:0,39,610	0/0:18,0:17:38.39:0,38,730	1/1:19,0:19:31.02:696,31,0	0/0:30,0:29:72.24:0,72,1481	0/1:2,0:17:48.84:74,0,49	1/1:7,16:31:85.21:1540,85,0	1/1:21,0:20:38.85:585,39,0	1/1:18,0:16:33.11:504,33,0	0/0:19,0:19:46.26:0,46,653	0/1:10,0:10:28.92:29,0,213	0/0:18,0:18:48.16:0,48,904	0/0:16,0:16:41.42:0,41,842	0/1:17,0:17:99:474,0,146	1/1:7,11:19:21.07:656,21,0	0/1:12,0:12:70.94:294,0,71
chr10	102148487	.	AC	A	11276.90	PASS	AB=0.548;AC=27;AF=0.482;AN=56;BaseQRankSum=12.810;DP=663;FS=2.813;HRun=3;HaplotypeScore=67.5689;InbreedingCoeff=0.9251;MQ=92.42;MQ0=0;MQRankSum=-4.823;QD=33.36;ReadPosRankSum=2.562;VQSLOD=5.5683;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:39:99:1339,108,0	1/1:0,13:13:36.11:446,36,0	0/0:30,0:30:88.14:0,88,1199	0/0:28,0:28:80.91:0,81,1039	1/1:0,23:23:60.19:744,60,0	0/0:24,0:24:72.24:0,72,1035	0/0:39,0:39:99:0,117,1616	1/1:2,35:37:99:1302,105,0	0/0:30,0:30:87.28:0,87,1232	0/0:26,0:26:78.26:0,78,1123	0/0:5,0:5:15.05:0,15,216	1/1:2,34:36:96.30:1190,96,0	1/1:1,26:27:66.21:818,66,0	0/0:26,0:26:78.26:0,78,1122	0/0:27,0:27:72.24:0,72,1036	1/1:0,21:21:60.19:744,60,0	0/0:30,0:30:90.30:0,90,1296	1/1:0,15:15:42.13:521,42,0	1/1:1,25:26:75.20:895,75,0	1/1:0,13:13:36.11:446,36,0	1/1:0,36:36:99:1227,99,0	0/0:10,0:10:30.10:0,30,432	0/0:15,0:15:42.14:0,42,605	0/0:19,0:19:54.18:0,54,778	0/0:16,0:16:48.16:0,48,691	0/1:4,19:23:99:638,0,104	1/1:1,22:23:60.19:744,60,0	1/1:0,6:6:18.06:223,18,0
chr10	102149805	.	AC	A	6138.49	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=19.417;DP=584;FS=9.767;HRun=1;HaplotypeScore=125.4645;InbreedingCoeff=0.9865;MQ=66.16;MQ0=0;MQRankSum=-16.259;QD=22.40;ReadPosRankSum=-0.568;VQSLOD=3.7514;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,23:32:74.69:593,75,0	1/1:3,8:11:32.94:269,33,0	0/0:9,0:9:17.16:0,17,212	0/0:10,0:10:8.52:0,9,237	1/1:5,22:27:65.57:509,66,0	0/0:19,0:19:57.19:0,57,908	0/0:29,0:29:84.27:0,84,1317	1/1:6,24:30:75.71:595,76,0	0/0:12,0:12:36.11:0,36,551	0/0:28,0:28:84.28:0,84,1324	0/0:19,0:19:57.18:0,57,886	1/1:1,7:8:23.93:189,24,0	1/1:1,25:26:74.82:597,75,0	0/0:22,0:22:66.21:0,66,1021	0/0:42,0:42:99:0,126,1960	1/1:1,19:20:59.85:477,60,0	0/0:29,0:29:87.25:0,87,1335	1/1:0,7:7:20.99:178,21,0	1/1:3,13:16:43.03:360,43,0	1/1:3,19:22:59.77:515,60,0	1/1:0,13:13:32.91:275,33,0	0/0:22,0:22:66.21:0,66,1028	0/0:11,0:11:33.11:0,33,527	0/0:38,0:38:99:0,114,1764	0/0:20,0:20:60.20:0,60,957	1/1:2,23:25:26.98:618,27,0	1/1:3,29:32:92.78:817,93,0	1/1:1,4:5:15.02:146,15,0
chr10	102149808	.	AGTG	A	9266.16	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=19.446;DP=564;FS=7.104;HRun=0;HaplotypeScore=133.6600;InbreedingCoeff=0.9628;MQ=70.11;MQ0=0;MQRankSum=-15.026;QD=36.20;ReadPosRankSum=0.189;VQSLOD=5.6879;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:26:67.79:812,68,0	1/1:0,8:8:24.08:307,24,0	0/0:12,0:12:24.08:0,24,526	0/0:11,0:11:18.74:0,19,384	1/1:3,22:25:65.42:787,65,0	0/0:18,0:18:54.19:0,54,1329	0/0:28,0:28:84.29:0,84,2066	1/1:0,27:27:81.24:1016,81,0	0/0:13,0:13:39.13:0,39,956	0/0:27,0:27:81.28:0,81,1995	0/0:18,0:18:54.19:0,54,1331	1/1:1,7:8:24.08:301,24,0	1/1:0,25:25:72.23:904,72,0	0/0:22,0:22:66.21:0,66,1577	0/0:42,0:42:99:0,123,3032	1/1:0,19:19:57.18:724,57,0	0/0:29,0:29:87.30:0,87,2132	1/1:0,7:7:21.07:276,21,0	1/1:1,15:16:47.89:627,48,0	1/1:1,21:22:59.78:786,60,0	1/1:0,13:13:30.08:385,30,0	0/0:20,0:20:60.21:0,60,1479	0/0:11,0:11:33.11:0,33,813	0/0:38,0:38:99:0,114,2804	0/0:19,0:19:57.18:0,57,1353	1/1:1,24:25:1.26:928,1,0	1/1:2,29:31:92.79:1235,93,0	1/1:0,4:4:12.04:178,12,0
chr10	102151197	.	CGTGTGTGTGTGTGTGTGTGT	C	1288.63	PASS	AB=1.000;AC=8;AF=0.148;AN=54;BaseQRankSum=4.157;DP=563;FS=1.122;HRun=0;HaplotypeScore=256.1843;InbreedingCoeff=0.6061;MQ=65.39;MQ0=24;MQRankSum=-3.953;QD=14.48;ReadPosRankSum=0.209;VQSLOD=2.5294;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:36.06:0,36,2118	./.	0/0:29,0:24:5.99:0,6,126	0/0:29,0:20:18.06:0,18,555	0/0:23,0:20:36.11:0,36,2437	0/0:29,0:29:54.66:0,55,3480	0/0:21,0:19:33.47:0,33,2205	0/1:19,0:19:74.70:75,0,96	0/0:15,0:14:30.08:0,30,1527	0/0:26,0:25:39.13:0,39,2501	0/0:22,0:22:39.12:0,39,2093	0/0:13,0:13:18.53:0,19,1490	0/0:19,0:18:39.13:0,39,2580	0/0:19,0:17:33.11:0,33,2019	0/0:26,0:25:57.18:0,57,3647	0/0:21,0:21:48.15:0,48,3393	0/0:22,0:22:48.14:0,48,3170	0/0:8,0:11:12.04:0,12,377	1/1:12,2:11:6.02:209,6,0	1/1:12,9:23:8.86:346,9,0	0/1:20,0:17:87.89:88,0,150	0/0:26,0:23:39.12:0,39,2445	0/0:16,0:16:18.06:0,18,1301	0/0:32,0:31:60.19:0,60,4316	0/0:20,0:20:42.14:0,42,2908	0/0:17,0:17:42.14:0,42,2367	1/1:4,9:13:13.57:711,14,0	0/0:9,0:9:21.07:0,21,1449
chr10	102154223	.	CA	C	11231.80	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=19.832;DP=640;FS=4.785;HRun=2;HaplotypeScore=86.2756;InbreedingCoeff=0.9987;MQ=96.17;MQ0=0;MQRankSum=-4.425;QD=36.83;ReadPosRankSum=4.000;VQSLOD=5.4330;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:84.25:1074,84,0	1/1:0,9:9:27.09:350,27,0	0/0:32,0:32:93.31:0,93,1367	0/0:28,0:28:80.82:0,81,1113	1/1:0,24:24:72.23:934,72,0	0/0:27,0:27:81.27:0,81,1214	0/0:21,0:21:63.21:0,63,944	1/1:1,26:27:78.23:984,78,0	0/0:19,0:19:57.19:0,57,854	0/0:30,0:30:84.28:0,84,1243	0/0:18,0:18:51.16:0,51,740	1/1:0,21:21:57.19:740,57,0	1/1:0,27:27:78.25:1013,78,0	0/0:16,0:16:45.15:0,45,674	0/0:24,0:24:69.22:0,69,1014	1/1:0,22:22:60.20:779,60,0	0/0:22,0:22:63.21:0,63,942	1/1:0,16:16:48.16:623,48,0	1/1:2,18:20:54.17:700,54,0	1/1:0,33:33:96.31:1245,96,0	1/1:0,29:29:81.26:1052,81,0	0/0:25,0:25:69.23:0,69,1034	0/0:22,0:22:63.20:0,63,924	0/0:26,0:26:78.26:0,78,1166	0/0:25,0:25:75.23:0,75,1085	1/1:1,12:13:36.10:453,36,0	1/1:0,29:29:81.26:1051,81,0	1/1:0,6:6:18.06:234,18,0
chr10	102154996	.	TG	T	2690.79	PASS	AB=0.922;AC=25;AF=0.446;AN=56;BaseQRankSum=3.996;DP=602;FS=5.347;HRun=11;HaplotypeScore=81.6332;InbreedingCoeff=0.4781;MQ=76.76;MQ0=0;MQRankSum=0.216;QD=7.54;ReadPosRankSum=6.591;VQSLOD=1.9935;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,24:36:33.56:420,34,0	1/1:9,10:19:5.41:175,5,0	0/0:19,0:17:16.97:0,17,155	0/1:23,0:22:13.94:14,0,87	1/1:8,16:25:41.61:360,42,0	0/1:14,1:15:0.63:1,0,181	0/1:23,3:26:59.37:59,0,302	0/0:18,0:18:11.91:0,12,88	0/0:23,0:23:26.79:0,27,260	0/1:17,1:18:12.62:13,0,84	0/0:17,0:17:18.02:0,18,178	1/1:5,15:22:44.84:337,45,0	1/1:2,16:19:43.99:350,44,0	0/1:20,1:21:8.17:8,0,261	0/0:19,3:22:8.90:0,9,288	1/1:4,19:24:53.92:426,54,0	0/1:27,6:33:41.47:41,0,403	1/1:6,16:25:45.62:341,46,0	0/0:12,0:16:26.40:0,26,196	0/0:13,0:21:9.70:0,10,55	0/0:15,0:20:14.45:0,14,105	0/0:22,1:23:11.37:0,11,298	0/0:22,2:24:8.40:0,8,264	0/1:24,4:28:25.83:26,0,353	0/0:19,1:20:14.11:0,14,321	1/1:4,9:13:23.96:197,24,0	0/0:13,0:22:12.15:0,12,79	1/1:5,5:10:14.97:122,15,0
chr10	102155361	.	T	TA	3502.94	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-9.933;DP=531;FS=3.554;HRun=9;HaplotypeScore=63.3030;InbreedingCoeff=0.9869;MQ=76.02;MQ0=0;MQRankSum=-1.280;QD=25.76;ReadPosRankSum=0.671;VQSLOD=4.3407;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:54.13:589,54,0	1/1:2,7:9:20.42:208,20,0	0/0:17,0:17:32.60:0,33,257	0/0:15,0:15:18.40:0,18,156	1/1:5,19:24:39.94:560,40,0	0/0:21,0:21:53.97:0,54,465	0/0:18,0:18:44.93:0,45,380	0/0:27,0:27:71.94:0,72,618	0/0:14,0:14:26.96:0,27,234	0/0:5,0:25:39.17:0,39,115	0/0:5,0:17:22.40:0,22,66	1/1:3,11:14:30.08:332,30,0	1/1:5,11:16:40.14:405,40,0	0/0:16,0:16:25.78:0,26,296	0/0:20,0:20:47.98:0,48,417	1/1:3,14:17:42.11:465,42,0	0/0:30,0:30:68.95:0,69,596	0/0:32,0:32:89.95:0,90,775	0/0:24,0:24:59.97:0,60,518	0/0:21,0:21:50.97:0,51,439	0/0:25,0:25:53.98:0,54,469	0/0:13,0:13:32.98:0,33,286	0/0:19,0:19:50.98:0,51,443	0/0:10,0:10:29.99:0,30,260	0/0:17,0:17:47.95:0,48,409	1/1:8,24:32:52.16:854,52,0	0/0:14,0:14:35.99:0,36,313	1/1:1,2:3:9.01:91,9,0
chr10	102155428	.	G	GT	885.86	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=-4.611;DP=308;FS=19.368;HRun=1;HaplotypeScore=62.1040;InbreedingCoeff=0.7312;MQ=83.78;MQ0=0;MQRankSum=-0.659;QD=10.42;ReadPosRankSum=2.156;VQSLOD=0.0631;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:38.10:0,38,366	0/0:5,0:5:11.99:0,12,104	0/1:16,0:15:3.44:3,0,200	0/1:13,0:12:9.87:10,0,57	0/0:12,0:12:23.95:0,24,238	0/0:11,0:11:26.96:0,27,251	0/0:6,0:6:12.01:0,12,134	1/1:5,11:16:26.99:286,27,0	0/0:10,0:10:26.95:0,27,307	0/0:5,0:5:11.97:0,12,108	0/0:11,0:11:22.25:0,22,213	0/0:9,0:9:14.76:0,15,146	0/0:6,0:6:17.93:0,18,155	0/0:13,0:13:18.51:0,19,217	0/0:14,0:14:36.02:0,36,396	0/0:12,0:12:30:0,30,331	0/0:16,0:16:38.91:0,39,391	0/0:23,0:23:35.04:0,35,327	1/1:2,7:9:14.98:150,15,0	1/1:7,1:8:14.99:137,15,0	1/1:2,8:10:9.01:119,9,0	0/0:6,0:6:4.72:0,5,49	0/0:2,0:2:5.96:0,6,44	0/0:7,0:7:18.04:0,18,213	0/0:9,0:9:12.03:0,12,149	0/0:15,0:15:20.95:0,21,169	1/1:7,6:13:29.80:351,30,0	0/0:10,0:10:23.93:0,24,216
chr10	102156095	.	AC	A	3339.69	PASS	AB=0.556;AC=49;AF=0.942;AN=52;BaseQRankSum=-3.495;DP=203;FS=15.970;HRun=3;HaplotypeScore=32.7352;InbreedingCoeff=0.3753;MQ=45.83;MQ0=0;MQRankSum=-2.007;QD=16.95;ReadPosRankSum=1.099;VQSLOD=1.9302;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:30.09:365,30,0	1/1:0,2:2:3.01:37,3,0	1/1:2,1:1:2.99:24,3,0	0/0:3,0:3:6.01:0,6,69	1/1:0,6:6:6.02:74,6,0	1/1:5,0:5:11.85:103,12,0	1/1:3,13:16:16.74:196,17,0	1/1:0,5:5:2.73:65,3,0	1/1:5,0:5:3.01:37,3,0	1/1:0,4:4:9.30:81,9,0	1/1:0,4:4:0.47:1,0,0	1/1:1,13:14:21.06:240,21,0	1/1:0,9:9:12.04:143,12,0	1/1:7,0:7:6.86:45,7,0	1/1:1,3:4:12.04:142,12,0	1/1:0,16:16:30.09:359,30,0	1/1:2,9:10:6.49:75,6,0	1/1:0,11:11:24.08:296,24,0	1/1:2,3:4:5.86:70,6,0	0/1:1,4:5:0:0,0,1	1/1:10,0:10:0.94:2,1,0	1/1:1,0:1:0.89:2,1,0	./.	1/1:6,0:6:6.46:75,6,0	1/1:9,1:10:12.04:144,12,0	1/1:0,18:18:54.16:654,54,0	1/1:0,3:3:9.03:110,9,0	./.
chr10	102156096	.	C	CCA	4124.18	PASS	AB=0.522;AC=47;AF=0.904;AN=52;BaseQRankSum=-2.595;DP=215;FS=20.295;HRun=0;HaplotypeScore=34.3437;InbreedingCoeff=0.4651;MQ=46.48;MQ0=0;MQRankSum=-1.460;QD=20.32;ReadPosRankSum=1.460;VQSLOD=1.8526;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:30.57:365,31,0	1/1:2,0:2:3.01:37,3,0	1/1:4,0:2:2.99:24,3,0	0/0:3,0:3:6.01:0,6,68	1/1:6,0:6:6.02:74,6,0	1/1:0,5:7:11.99:163,12,0	1/1:13,3:16:24.77:276,25,0	1/1:7,0:7:15.05:262,15,0	1/1:0,5:5:6.02:80,6,0	1/1:4,0:4:10.85:156,11,0	1/1:4,0:4:0.89:2,1,0	1/1:14,0:14:21.06:252,21,0	1/1:9,0:9:12.04:143,12,0	1/1:0,7:7:9.03:146,9,0	1/1:3,1:4:12.04:152,12,0	1/1:17,0:17:30.09:363,30,0	1/1:10,2:11:9.50:130,10,0	1/1:11,0:11:24.08:299,24,0	1/1:4,1:4:9.03:133,9,0	0/0:4,1:5:1.66:0,2,3	0/1:1,9:12:0.11:0,0,0	1/1:0,0:1:1.25:3,1,0	./.	1/1:0,6:6:8.79:122,9,0	1/1:3,7:10:12.03:161,12,0	1/1:19,0:19:54.16:654,54,0	1/1:3,0:3:9.03:126,9,0	./.
chr10	102156911	.	AC	A	4705.77	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.624;DP=603;FS=3.971;HRun=1;HaplotypeScore=69.3740;InbreedingCoeff=0.9991;MQ=77.19;MQ0=0;MQRankSum=-1.664;QD=39.88;ReadPosRankSum=-1.499;VQSLOD=4.9057;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.03:0,78,1377	0/0:10,0:10:30.06:0,30,451	0/0:17,0:17:30.04:0,30,673	0/0:14,0:14:42.14:0,42,659	0/0:36,0:36:99:0,105,1625	0/0:19,0:19:57.19:0,57,908	0/0:22,0:22:66.22:0,66,1049	1/1:0,40:40:99:1645,120,0	0/0:11,0:11:33.11:0,33,527	0/0:27,0:27:81.23:0,81,1264	0/0:17,0:17:51.17:0,51,815	0/0:18,0:18:54.18:0,54,863	0/0:19,0:19:57.18:0,57,878	0/0:22,0:22:66.23:0,66,1054	0/0:20,0:20:57.14:0,57,860	0/0:11,0:11:33.11:0,33,523	0/0:41,0:41:99:0,123,1959	0/0:18,0:18:54.18:0,54,856	1/1:0,16:16:48.16:670,48,0	1/1:0,24:24:63.21:881,63,0	1/1:0,12:12:36.12:503,36,0	0/0:19,0:19:54.18:0,54,858	0/0:28,0:28:84.27:0,84,1313	0/0:33,0:33:96.31:0,96,1500	0/0:22,0:22:66.17:0,66,1004	0/0:23,0:23:69.24:0,69,1103	1/1:0,26:26:72.24:1007,72,0	0/0:8,0:8:24.08:0,24,382
chr10	102157791	.	CT	C	5062.18	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=18.049;DP=703;FS=0.000;HRun=6;HaplotypeScore=101.1389;InbreedingCoeff=0.9813;MQ=78.27;MQ0=0;MQRankSum=-1.603;QD=25.83;ReadPosRankSum=2.575;VQSLOD=4.6610;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,38:41:99:1063,99,0	1/1:1,10:11:21.05:225,21,0	0/0:17,0:17:18.65:0,19,393	0/0:17,0:17:34.93:0,35,375	1/1:0,25:24:60.15:644,60,0	0/0:21,0:21:63.20:0,63,828	0/0:25,0:25:72.20:0,72,918	0/0:33,0:33:90.26:0,90,1135	0/0:25,0:25:69.21:0,69,893	0/0:29,0:29:72.23:0,72,944	0/0:33,0:33:93.28:0,93,1191	1/1:2,26:28:63.16:677,63,0	1/1:3,23:26:66.16:708,66,0	0/0:18,0:18:54.17:0,54,698	0/0:29,0:29:84.24:0,84,1061	1/1:1,24:25:23.68:605,24,0	0/0:37,0:37:99:0,108,1406	1/1:0,13:13:33.08:355,33,0	0/0:26,0:26:72.21:0,72,909	0/0:35,0:35:93.26:0,93,1204	0/0:19,0:19:54.18:0,54,710	0/0:34,0:34:96.30:0,96,1250	0/0:26,0:26:72.23:0,72,947	0/0:25,0:25:72.22:0,72,932	0/0:29,0:29:81.21:0,81,1031	1/1:1,23:24:69.15:721,69,0	0/0:29,0:29:87.27:0,87,1129	1/1:0,3:3:6.02:64,6,0
chr10	102158059	.	T	TTTGTTG	3659.65	PASS	AB=0.933;AC=17;AF=0.304;AN=56;BaseQRankSum=3.914;DP=507;FS=11.332;HRun=0;HaplotypeScore=111.5624;InbreedingCoeff=0.8180;MQ=67.34;MQ0=1;MQRankSum=-6.566;QD=28.59;ReadPosRankSum=-1.418;VQSLOD=2.3977;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,9:18:12.04:306,12,0	1/1:1,4:5:6.02:123,6,0	0/0:34,0:22:29.76:0,30,649	0/0:32,0:21:31.75:0,32,571	1/1:14,0:13:36.11:875,36,0	0/0:9,0:9:15.05:0,15,318	0/0:25,0:25:47.16:0,47,944	0/0:15,0:15:27.06:0,27,474	0/0:15,0:15:20.14:0,20,405	0/0:18,0:18:33.10:0,33,658	0/0:19,0:19:35.98:0,36,577	1/1:7,12:20:3.01:98,3,0	1/1:2,8:12:6.02:198,6,0	0/0:17,0:17:39.11:0,39,744	0/0:19,0:19:42:0,42,825	1/1:15,0:15:21.04:448,21,0	0/0:16,0:16:39.11:0,39,715	1/1:4,0:10:6.01:94,6,0	0/0:27,0:27:33.08:0,33,615	0/0:23,0:23:38.92:0,39,595	0/0:22,0:22:37.34:0,37,542	0/0:26,0:26:60.96:0,61,1165	0/0:14,0:14:36.11:0,36,727	0/0:24,0:24:51.17:0,51,992	0/0:9,0:9:21.07:0,21,446	0/1:26,0:28:3.57:1418,0,4	0/0:15,0:15:39.12:0,39,699	1/1:3,3:6:3.01:99,3,0
chr10	102158079	.	T	TG	1477.77	PASS	AB=0.885;AC=10;AF=0.179;AN=56;BaseQRankSum=7.428;DP=554;FS=4.099;HRun=0;HaplotypeScore=97.6054;InbreedingCoeff=0.0329;MQ=54.95;MQ0=15;MQRankSum=-5.269;QD=9.66;ReadPosRankSum=-1.810;VQSLOD=3.4725;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:36.32:127,0,36	1/1:10,0:10:6.06:91,6,0	0/0:26,0:15:41.73:0,42,497	0/0:24,1:14:35.67:0,36,438	0/1:16,5:20:31.29:400,0,31	0/0:15,0:14:12.01:0,12,313	0/0:27,0:26:62.98:0,63,790	0/0:18,0:15:41.96:0,42,452	0/0:16,0:15:33.01:0,33,399	0/0:21,0:21:38:0,38,603	0/0:18,0:18:41.93:0,42,487	0/1:25,0:24:21.04:21,0,34	0/1:20,0:19:19.26:19,0,145	0/0:16,0:15:42.12:0,42,551	0/0:24,0:23:59.58:0,60,721	0/1:10,3:13:7.93:234,0,8	0/0:22,0:20:42.58:0,43,542	0/1:7,2:9:9.57:85,0,10	0/0:18,0:18:45.87:0,46,529	0/0:17,0:17:33.27:0,33,444	0/0:25,0:24:49.54:0,50,503	0/0:28,0:27:71.97:0,72,907	0/0:15,0:15:44.49:0,44,562	0/0:35,0:33:72.16:0,72,962	0/0:13,0:13:32.46:0,32,411	0/1:11,14:25:59.13:620,0,59	0/0:22,0:22:43.76:0,44,531	0/1:11,0:10:25.39:25,0,25
chr10	102158080	.	TTGTGTG	T	417.87	PASS	AB=0.963;AC=11;AF=0.204;AN=54;BaseQRankSum=0.739;DP=562;FS=0.000;HRun=0;HaplotypeScore=131.8360;InbreedingCoeff=0.6938;MQ=54.44;MQ0=16;MQRankSum=-2.495;QD=3.76;ReadPosRankSum=1.456;VQSLOD=2.3522;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:18.06:0,18,390	0/0:10,0:10:9.03:0,9,197	./.	0/0:24,0:13:0:0,0,0	0/0:22,0:21:21.07:0,21,482	0/0:16,0:15:27.09:0,27,662	0/0:28,0:27:21.04:0,21,451	1/1:16,2:15:5.97:62,6,0	0/0:16,0:15:15.05:0,15,368	0/0:21,0:21:33.03:0,33,646	0/0:12,0:17:9.03:0,9,196	0/0:24,0:23:15.01:0,15,266	0/0:20,0:19:27.09:0,27,672	0/0:16,0:15:24.06:0,24,538	0/0:24,0:23:24:0,24,613	0/0:14,0:14:8.95:0,9,166	0/0:17,0:20:14.03:0,14,222	1/1:10,0:10:3.47:26,3,0	1/1:18,0:18:5.52:84,6,0	1/1:13,1:17:12:162,12,0	0/1:25,1:24:51.57:52,0,123	0/0:27,0:26:30.10:0,30,873	0/0:14,0:14:12.04:0,12,363	0/0:30,0:34:42.08:0,42,1090	0/0:14,0:14:24.07:0,24,600	0/0:27,0:27:22.63:0,23,510	1/1:13,9:22:9.03:182,9,0	0/0:11,0:10:21.07:0,21,444
chr10	102160158	.	G	GAGACAGAC	1286.07	PASS	AB=1.000;AC=11;AF=0.212;AN=52;BaseQRankSum=0.253;DP=434;FS=6.771;HRun=0;HaplotypeScore=120.3447;InbreedingCoeff=0.8103;MQ=65.02;MQ0=2;MQRankSum=-4.292;QD=16.70;ReadPosRankSum=-1.705;VQSLOD=2.1519;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:17.98:271,18,0	1/1:1,2:4:3.01:110,3,0	0/0:30,0:23:59.17:0,59,986	0/0:23,0:12:29.04:0,29,627	./.	0/0:17,0:17:51.14:0,51,1280	0/0:16,0:16:42.11:0,42,941	0/0:23,0:23:66.98:0,67,954	0/0:13,0:13:14.89:0,15,709	0/0:11,0:11:33.11:0,33,834	0/0:17,0:17:45.06:0,45,1111	1/1:0,11:11:6.02:249,6,0	1/1:11,0:10:20.36:379,20,0	0/0:17,0:17:47.19:0,47,1167	0/0:10,0:10:30.06:0,30,713	1/1:3,11:14:14.98:431,15,0	0/0:22,0:22:66.23:0,66,1706	0/0:10,0:10:2.06:0,2,225	0/0:19,0:19:42.04:0,42,633	0/0:20,0:20:39.10:0,39,582	0/0:23,0:23:18.49:0,18,213	0/0:12,0:12:36.11:0,36,924	0/0:15,0:15:29.79:0,30,687	0/0:16,0:15:30.10:0,30,707	0/0:15,0:15:42.14:0,42,1051	0/1:10,0:10:0.95:1,0,380	0/0:14,0:14:36.04:0,36,556	./.
chr10	102160162	.	T	TAGACAGAC	1314.90	PASS	AB=1.000;AC=18;AF=0.346;AN=52;BaseQRankSum=3.371;DP=439;FS=6.293;HRun=0;HaplotypeScore=121.7386;InbreedingCoeff=0.5694;MQ=62.30;MQ0=3;MQRankSum=-4.570;QD=7.26;ReadPosRankSum=-1.865;VQSLOD=1.7914;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,16:27:6.02:176,6,0	1/1:4,0:4:3.01:111,3,0	0/0:28,0:21:21.99:0,22,313	0/0:22,0:11:19.86:0,20,261	./.	0/0:17,0:17:45.12:0,45,828	0/0:16,0:16:27.08:0,27,477	1/1:27,0:26:12.55:59,13,0	0/0:13,0:13:24.08:0,24,531	0/0:11,0:11:30.10:0,30,577	0/0:18,0:18:39.01:0,39,781	1/1:11,0:11:6.02:248,6,0	1/1:11,0:10:18.06:357,18,0	0/0:16,0:16:39.13:0,39,788	0/0:11,0:11:27.09:0,27,489	1/1:14,0:14:18.04:474,18,0	0/0:23,0:23:60.18:0,60,1359	0/1:11,0:11:3.79:4,0,226	0/1:15,0:15:21.75:22,0,76	0/1:21,0:21:25.85:26,0,34	1/1:25,0:25:0.28:0,0,0	0/0:12,0:12:33.11:0,33,693	0/0:16,0:16:16.10:0,16,247	0/0:16,0:15:30.06:0,30,364	0/0:16,0:16:33.08:0,33,660	0/0:10,0:10:24:0,24,403	0/1:15,0:15:7.21:7,0,85	./.
chr10	102160180	.	GACACAC	G	1049.23	PASS	AB=0.684;AC=13;AF=0.241;AN=54;BaseQRankSum=6.108;DP=428;FS=3.212;HRun=0;HaplotypeScore=104.9305;InbreedingCoeff=0.6269;MQ=58.08;MQ0=8;MQRankSum=-2.819;QD=8.13;ReadPosRankSum=-1.750;VQSLOD=1.5775;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:6.02:0,6,167	0/0:4,0:4:3.01:0,3,89	1/1:16,0:9:1.55:4,2,0	0/0:23,0:11:3.48:0,3,36	0/0:11,0:11:6.02:0,6,185	0/0:15,0:16:36.12:0,36,1098	0/0:17,0:19:28.63:0,29,794	1/1:16,0:23:14.34:246,14,0	0/0:11,0:12:30.09:0,30,736	0/0:12,0:12:24.08:0,24,650	0/0:18,0:20:39.12:0,39,1049	0/0:9,0:9:6.02:0,6,170	0/0:9,0:8:12:0,12,244	0/0:16,0:17:42.14:0,42,1063	0/0:12,0:12:24.08:0,24,609	0/0:14,0:14:15.05:0,15,422	0/0:26,0:27:63.22:0,63,1875	0/0:6,0:12:10.84:0,11,425	1/1:10,3:11:9.03:178,9,0	1/1:9,9:18:6.02:95,6,0	1/1:18,13:30:0.94:2,1,0	0/0:15,0:15:45.15:0,45,1174	0/0:8,0:14:6:0,6,111	0/0:9,0:16:18.06:0,18,477	0/0:13,0:14:29.38:0,29,863	1/1:2,9:12:26.83:514,27,0	0/1:7,6:13:18.62:160,0,19	./.
chr10	102161363	.	AATACACAC	A	5774.48	PASS	AB=0.742;AC=17;AF=0.304;AN=56;BaseQRankSum=9.353;DP=1009;FS=18.007;HRun=0;HaplotypeScore=274.0982;InbreedingCoeff=0.8924;MQ=49.65;MQ0=7;MQRankSum=-10.519;QD=24.06;ReadPosRankSum=1.343;VQSLOD=2.4853;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,2:23:5.67:250,6,0	1/1:5,13:18:29.85:429,30,0	0/0:61,0:29:22.37:0,22,491	0/0:46,0:24:27.03:0,27,583	1/1:26,8:34:26.66:219,27,0	0/0:23,0:23:63.22:0,63,2043	0/0:20,0:20:20.84:0,21,731	0/0:59,0:58:99:0,105,3285	0/0:47,0:47:99:0,105,3581	0/0:58,0:58:99:0,132,4674	0/0:20,0:20:54.19:0,54,1676	1/1:20,14:33:56.82:853,57,0	1/1:22,13:35:62.86:981,63,0	0/0:45,0:45:81.26:0,81,2897	0/0:64,0:64:99:0,153,5028	0/1:15,8:23:36.74:559,0,37	0/0:27,0:28:56.87:0,57,1969	1/1:13,3:16:14.93:216,15,0	0/0:21,0:21:48.16:0,48,1765	0/0:37,0:37:78.25:0,78,2928	0/0:51,0:51:99:0,108,4094	0/0:46,0:46:79.01:0,79,2744	0/0:34,0:34:75.24:0,75,2514	0/0:38,0:38:75.11:0,75,2525	0/0:37,0:37:60.21:0,60,2030	1/1:22,14:36:55.15:1457,55,0	0/0:33,0:33:75.22:0,75,2449	1/1:6,15:21:33.11:810,33,0
chr10	102161463	.	CAT	C	7438.24	PASS	AB=0.722;AC=17;AF=0.304;AN=56;BaseQRankSum=10.659;DP=957;FS=5.707;HRun=0;HaplotypeScore=202.9798;InbreedingCoeff=0.7682;MQ=48.13;MQ0=31;MQRankSum=-2.103;QD=22.89;ReadPosRankSum=3.925;VQSLOD=5.0672;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:5,15:20:43.02:362,0,43	1/1:0,17:17:42.10:538,42,0	0/0:23,0:8:13.80:0,14,213	0/1:32,0:7:2.96:3,0,123	1/1:0,23:23:39.05:479,39,0	0/0:26,0:26:45.15:0,45,649	0/0:22,0:20:42.14:0,42,711	0/0:41,0:39:99:0,108,1767	0/0:49,0:48:87.28:0,87,1388	0/0:45,0:43:99:0,126,2133	0/0:28,0:27:66.22:0,66,1061	1/1:3,45:46:87.15:1079,87,0	1/1:3,40:42:78.02:954,78,0	0/0:34,1:35:41.33:0,41,1168	0/0:50,0:49:81.27:0,81,1276	1/1:6,37:41:41.39:1012,41,0	0/0:24,0:22:51.17:0,51,878	0/1:9,18:27:99:648,0,119	0/0:10,0:10:27.04:0,27,408	0/0:50,0:50:99:0,129,2175	0/0:42,0:40:99:0,102,1759	0/0:41,0:41:84.28:0,84,1328	0/0:35,0:33:75.25:0,75,1225	0/0:21,0:21:39.03:0,39,609	0/0:52,0:52:99:0,105,1738	1/1:3,49:51:99:1905,147,0	0/0:38,0:36:69.22:0,69,1091	1/1:7,12:19:19.95:459,20,0
chr10	102161524	.	CAT	C	47.67	PASS	AB=0.889;AC=4;AF=0.077;AN=52;BaseQRankSum=3.936;DP=738;FS=4.691;HRun=0;HaplotypeScore=187.9433;InbreedingCoeff=0.1461;MQ=32.67;MQ0=241;MQRankSum=-3.492;QD=0.72;ReadPosRankSum=1.669;VQSLOD=2.4158;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:16:5.20:0,5,151	0/0:8,0:6:8.97:0,9,130	./.	./.	0/0:15,0:13:6.01:0,6,83	0/1:30,1:26:27.32:27,0,205	1/1:18,0:11:2.68:11,3,0	0/0:25,0:15:41.97:0,42,602	0/0:31,0:24:21:0,21,301	0/0:45,0:31:93.17:0,93,1547	0/0:17,0:15:3:0,3,58	0/0:31,0:19:11.96:0,12,157	0/0:33,0:25:27.03:0,27,379	0/0:20,0:15:12.01:0,12,165	0/0:42,0:36:24.07:0,24,407	0/0:26,0:13:14.99:0,15,156	0/0:21,0:15:12.49:0,12,231	0/1:13,4:16:99:105,0,249	0/0:17,0:8:21.04:0,21,367	0/0:36,0:30:60:0,60,906	0/0:43,0:25:36.12:0,36,656	0/0:34,0:26:6.01:0,6,83	0/0:19,0:12:8.99:0,9,75	0/0:17,0:12:2.96:0,3,19	0/0:25,0:22:17.99:0,18,266	0/0:51,0:39:99:0,111,1704	0/0:25,0:17:21.07:0,21,394	0/0:10,0:9:26.60:0,27,256
chr10	102194341	.	CCACCATCAT	C	4657.81	PASS	AB=0.817;AC=12;AF=0.214;AN=56;BaseQRankSum=11.280;DP=848;FS=4.239;HRun=0;HaplotypeScore=267.5169;InbreedingCoeff=0.3912;MQ=59.13;MQ0=11;MQRankSum=-10.740;QD=17.78;ReadPosRankSum=0.152;VQSLOD=3.2475;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:49,4:52:20.35:450,20,0	0/1:19,2:21:55.54:174,0,56	0/0:37,0:24:21.01:0,21,396	0/0:56,0:38:23.54:0,24,467	1/1:30,3:32:24.56:420,25,0	0/0:21,0:21:39.13:0,39,1543	0/0:32,0:32:54.15:0,54,1926	0/0:39,0:39:52.05:0,52,1635	0/0:31,0:31:66.23:0,66,2580	0/0:34,0:33:57.19:0,57,2075	0/0:21,0:20:45.12:0,45,1583	0/1:26,3:28:55.44:652,0,55	0/1:27,4:31:5.64:480,0,6	0/0:25,0:25:63.20:0,63,2607	0/0:34,0:33:60.17:0,60,2360	0/1:19,20:39:52.10:823,0,52	0/0:22,0:22:36.12:0,36,1388	0/1:13,1:14:99:172,0,171	0/0:24,0:24:40.33:0,40,1243	0/0:33,0:32:60.21:0,60,2213	0/0:45,0:44:99:0,111,4128	0/0:22,0:22:45.14:0,45,1759	0/0:14,0:13:23.93:0,24,782	0/0:42,0:42:99:0,102,3959	0/0:35,0:35:66.23:0,66,2681	1/1:15,18:33:55.17:1169,55,0	0/0:19,0:19:33.11:0,33,1314	0/1:3,6:9:45.18:318,0,45
chr10	102194362	.	CCAT	C	3203.82	PASS	AB=0.901;AC=13;AF=0.232;AN=56;BaseQRankSum=16.679;DP=850;FS=10.893;HRun=0;HaplotypeScore=186.6713;InbreedingCoeff=0.5100;MQ=50.24;MQ0=24;MQRankSum=-13.143;QD=12.87;ReadPosRankSum=2.849;VQSLOD=2.8080;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:45,6:50:99:347,0,181	0/1:19,1:20:8.77:177,0,9	0/0:49,0:18:32.60:0,33,548	0/0:60,0:33:48.61:0,49,1083	1/1:17,13:29:26.87:311,27,0	0/0:24,0:23:66.20:0,66,1358	0/0:30,0:30:84.24:0,84,1669	0/0:43,0:43:99:0,110,2157	0/0:25,0:25:69.24:0,69,1500	0/0:34,0:31:71.97:0,72,1478	0/0:23,0:21:60.17:0,60,1195	0/1:21,8:28:26.26:580,0,26	1/1:22,6:28:33.73:544,34,0	0/0:28,0:28:75.24:0,75,1609	0/0:28,0:27:72.22:0,72,1503	1/1:27,10:37:63.47:650,63,0	0/0:26,0:26:69.24:0,69,1395	0/1:13,1:14:71.89:135,0,72	0/0:23,0:21:54.06:0,54,902	0/0:28,0:26:69.22:0,69,1441	0/0:52,0:51:99:0,147,2963	0/0:26,0:26:69.21:0,69,1363	0/0:10,0:9:23.93:0,24,437	0/0:47,0:47:99:0,134,2788	0/0:27,0:27:75.26:0,75,1582	0/1:30,2:32:35.03:524,0,35	0/0:18,0:18:48.15:0,48,966	1/1:7,1:8:15.30:114,15,0
chr10	102194363	.	C	CATCACCATT	6124.46	PASS	AB=0.875;AC=17;AF=0.304;AN=56;BaseQRankSum=14.916;DP=844;FS=8.459;HRun=0;HaplotypeScore=267.0792;InbreedingCoeff=0.8901;MQ=50.24;MQ0=24;MQRankSum=-13.576;QD=24.80;ReadPosRankSum=2.817;VQSLOD=2.4676;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,25:49:5.03:457,5,0	1/1:20,0:20:16.97:295,17,0	0/0:49,0:18:35.76:0,36,548	0/0:59,0:32:43.47:0,43,824	1/1:30,0:29:25.24:428,25,0	0/0:24,0:23:69.17:0,69,1719	0/0:30,0:30:84.24:0,84,2081	0/0:43,0:43:99:0,104,2110	0/0:25,0:25:69.24:0,69,2012	0/0:33,0:30:66.22:0,66,1851	0/0:23,0:21:60.17:0,60,1538	1/1:29,0:28:46.42:1021,46,0	1/1:28,0:28:37.42:702,37,0	0/0:27,0:27:75.24:0,75,2130	0/0:27,0:26:72.22:0,72,1963	1/1:37,0:37:62.30:1115,62,0	0/0:27,0:27:69.71:0,70,1705	0/1:12,2:14:48.81:351,0,49	0/0:22,0:20:46.32:0,46,979	0/0:29,0:27:69.22:0,69,1819	0/0:52,0:51:99:0,148,3809	0/0:25,0:25:69.21:0,69,1759	0/0:10,0:9:23.93:0,24,585	0/0:48,0:48:99:0,138,3655	0/0:27,0:27:72.25:0,72,2066	1/1:31,0:31:64.49:1353,64,0	0/0:17,0:17:48.15:0,48,1258	1/1:8,0:8:16.30:404,16,0
chr10	102194365	.	T	TCAC	4928.13	PASS	AB=0.948;AC=15;AF=0.268;AN=56;BaseQRankSum=17.289;DP=844;FS=11.207;HRun=0;HaplotypeScore=188.8163;InbreedingCoeff=0.7218;MQ=50.82;MQ0=23;MQRankSum=-13.750;QD=19.87;ReadPosRankSum=3.305;VQSLOD=3.8932;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:49,2:50:99:582,0,148	1/1:9,9:18:17.94:381,18,0	0/0:48,0:17:35.60:0,36,483	0/0:58,0:31:60.34:0,60,929	1/1:27,3:29:25.21:360,25,0	0/0:24,0:23:65.76:0,66,1085	0/0:30,0:30:84.23:0,84,1340	0/0:45,0:45:99:0,113,1789	0/0:24,0:24:69.24:0,69,1169	0/0:31,0:28:72.23:0,72,1173	0/0:22,0:20:60.17:0,60,988	1/1:25,5:29:17.37:839,17,0	1/1:15,13:28:50.34:746,50,0	0/0:25,0:25:75.24:0,75,1250	0/0:27,0:26:72.22:0,72,1174	1/1:36,3:39:66.83:872,67,0	0/0:26,0:26:62.23:0,62,1147	0/1:14,0:14:32.20:243,0,32	0/0:22,0:20:54.06:0,54,770	0/0:30,0:28:75.22:0,75,1189	0/0:55,0:54:99:0,153,2387	0/0:25,0:25:69.21:0,69,1118	0/0:10,0:9:23.93:0,24,347	0/0:49,0:49:99:0,141,2282	0/0:27,0:27:75.26:0,75,1264	0/1:26,4:30:20.08:677,0,20	0/0:17,0:17:48.15:0,48,768	1/1:8,0:8:17.08:228,17,0
chr10	102194378	.	CATT	C	3452.73	PASS	AB=0.780;AC=12;AF=0.214;AN=56;BaseQRankSum=15.390;DP=831;FS=8.568;HRun=0;HaplotypeScore=185.4915;InbreedingCoeff=0.3172;MQ=51.54;MQ0=21;MQRankSum=-13.123;QD=14.39;ReadPosRankSum=4.921;VQSLOD=2.0931;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,14:43:99:702,0,385	0/1:12,3:15:59.11:229,0,59	0/0:52,0:14:37.79:0,38,600	0/0:58,0:28:74.10:0,74,1325	1/1:14,15:29:5.17:98,5,0	0/0:22,0:22:63.68:0,64,1404	0/0:31,0:31:93.31:0,93,2024	0/0:43,0:43:99:0,116,2273	0/0:29,0:29:87.25:0,87,1744	0/0:26,0:23:64.45:0,64,1369	0/0:18,0:17:51.15:0,51,1087	0/1:23,8:31:55.04:642,0,55	1/1:21,7:27:11.41:613,11,0	0/0:28,0:28:81.28:0,81,1783	0/0:26,0:25:72.25:0,72,1636	1/1:30,9:39:18.71:659,19,0	0/0:25,0:25:52.52:0,53,1505	0/1:8,8:16:45.92:163,0,46	0/0:20,0:15:42.08:0,42,815	0/0:27,0:26:75.06:0,75,1509	0/0:55,0:54:99:0,148,3344	0/0:23,0:23:69.19:0,69,1482	0/0:11,0:11:30.09:0,30,642	0/0:50,0:50:99:0,149,3160	0/0:28,0:28:81.25:0,81,1651	0/1:23,7:29:99:308,0,197	0/0:19,0:19:54.16:0,54,1110	0/1:7,2:9:35.30:38,0,35
chr10	102194380	.	T	TCAC	4002.43	PASS	AB=0.861;AC=11;AF=0.196;AN=56;BaseQRankSum=12.839;DP=830;FS=10.931;HRun=0;HaplotypeScore=185.5759;InbreedingCoeff=0.0982;MQ=51.47;MQ0=22;MQRankSum=-11.611;QD=17.03;ReadPosRankSum=3.662;VQSLOD=2.7343;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:38,4:42:99:737,0,365	0/1:11,4:15:99:395,0,133	0/0:52,0:14:28.05:0,28,452	0/0:59,0:29:73.11:0,73,1162	1/1:25,4:29:4:86,4,0	0/0:22,0:22:63.10:0,63,1169	0/0:33,0:33:96.28:0,96,1655	0/0:41,0:41:99:0,117,2016	0/0:30,0:30:90.27:0,90,1562	0/0:25,0:22:53.23:0,53,1129	0/0:18,0:17:51.17:0,51,936	0/1:18,13:32:99:849,0,230	0/1:23,5:27:57.36:580,0,57	0/0:28,0:28:81.24:0,81,1403	0/0:26,0:25:75.24:0,75,1367	0/1:32,5:37:99:760,0,191	0/0:25,0:25:65.77:0,66,1228	1/1:12,2:14:2.92:247,3,0	0/0:22,0:17:42.14:0,42,772	0/0:28,0:26:75.08:0,75,1310	0/0:53,0:52:99:0,150,2704	0/0:24,0:24:72.20:0,72,1262	0/0:11,0:11:30.09:0,30,515	0/0:51,0:51:99:0,153,2654	0/0:28,0:28:81.25:0,81,1448	0/1:29,0:28:99:225,0,419	0/0:19,0:19:54.15:0,54,933	0/1:8,1:9:49.61:123,0,50
chr10	102195213	.	T	TTCTCTC	3113.47	PASS	AB=0.995;AC=38;AF=0.704;AN=54;BaseQRankSum=-0.244;DP=639;FS=6.090;HRun=0;HaplotypeScore=150.1122;InbreedingCoeff=0.0835;MQ=70.45;MQ0=11;MQRankSum=-2.790;QD=6.26;ReadPosRankSum=-1.432;VQSLOD=2.1686;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:32:26:432,26,0	1/1:11,0:11:2.73:44,3,0	0/0:38,0:26:1.55:0,2,4	./.	1/1:21,0:21:9.03:186,9,0	0/0:27,0:27:0.61:0,1,119	0/1:25,0:25:15.91:16,0,71	1/1:33,0:33:12.84:92,13,0	0/1:19,0:20:15.27:15,0,132	0/1:17,0:18:21.61:22,0,153	0/1:9,0:11:9.03:9,0,27	1/1:12,5:19:9.03:157,9,0	1/1:17,0:26:9.50:197,10,0	0/1:15,0:15:31.79:32,0,89	0/0:23,0:24:10.71:0,11,228	1/1:15,0:19:14.16:248,14,0	0/1:22,0:22:14.12:14,0,261	1/1:5,0:12:5.10:92,5,0	1/1:21,0:21:11.02:145,11,0	1/1:26,0:26:12.03:213,12,0	1/1:27,0:26:13.58:212,14,0	1/1:28,0:27:24.01:401,24,0	0/1:20,0:21:27.41:69,0,27	0/1:20,0:19:6.07:6,0,192	0/0:13,0:13:3:0,3,40	1/1:27,0:26:24.53:437,25,0	1/1:24,4:31:6.02:134,6,0	1/1:5,0:5:3.01:93,3,0
chr10	102195377	.	AAAAC	A	7077.13	PASS	AB=0.633;AC=27;AF=0.482;AN=56;BaseQRankSum=15.250;DP=615;FS=6.011;HRun=0;HaplotypeScore=125.1332;InbreedingCoeff=0.9684;MQ=64.65;MQ0=2;MQRankSum=-3.466;QD=21.91;ReadPosRankSum=3.871;VQSLOD=4.3682;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,20:32:54.13:849,54,0	1/1:2,10:12:24.55:389,25,0	0/0:19,0:15:12:0,12,197	0/0:15,0:13:21:0,21,429	1/1:11,26:37:66.11:960,66,0	0/0:16,0:16:30.09:0,30,648	0/0:22,0:22:48.15:0,48,1001	1/1:8,0:23:21.66:146,22,0	0/0:19,0:19:42.09:0,42,841	0/0:23,0:23:51.16:0,51,1142	0/0:23,0:23:45.15:0,45,1026	1/1:9,14:23:33.11:537,33,0	1/1:3,19:22:45.15:732,45,0	0/0:17,0:17:33.11:0,33,790	0/0:19,0:19:42.13:0,42,922	1/1:6,16:22:36.12:586,36,0	0/0:34,0:35:66.23:0,66,1407	1/1:4,22:26:30.63:761,31,0	1/1:12,0:23:21.69:204,22,0	1/1:5,0:27:29.47:345,29,0	0/1:8,0:19:0:0,0,0	0/0:22,0:22:54.19:0,54,1252	0/0:16,0:16:23.87:0,24,477	0/0:27,0:26:51.65:0,52,1159	0/0:19,0:19:45.15:0,45,1021	1/1:2,17:19:51.13:777,51,0	1/1:3,0:28:53.82:497,54,0	1/1:1,9:9:18.06:293,18,0
chr10	102195631	.	GA	G	2496.76	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=11.273;DP=600;FS=8.561;HRun=10;HaplotypeScore=65.2991;InbreedingCoeff=0.8851;MQ=75.41;MQ0=0;MQRankSum=0.568;QD=18.36;ReadPosRankSum=3.505;VQSLOD=4.3489;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:65.97:573,66,0	1/1:1,7:8:17.98:156,18,0	0/1:12,0:12:18.35:18,0,91	0/0:15,0:14:9.55:0,10,173	1/1:4,25:29:44.82:618,45,0	0/0:24,0:25:66:0,66,702	0/0:19,1:20:22.08:0,22,470	0/0:31,0:31:69.17:0,69,754	0/0:15,0:15:45.11:0,45,491	0/0:26,0:26:69.16:0,69,743	0/0:23,0:24:69:0,69,736	1/1:0,17:17:50.99:443,51,0	1/1:2,17:19:17.69:383,18,0	0/0:26,1:27:52.15:0,52,795	0/0:25,0:27:72:0,72,755	1/1:3,20:23:56.98:495,57,0	0/0:14,2:16:19.04:0,19,420	0/0:13,0:13:33.09:0,33,365	0/0:25,2:27:23.09:0,23,711	0/0:24,0:24:63.17:0,63,697	0/0:23,0:23:57.15:0,57,630	0/0:25,0:25:66.18:0,66,730	0/0:22,1:23:31.10:0,31,571	0/0:24,1:25:34.17:0,34,605	0/0:23,0:23:54.15:0,54,597	0/0:7,0:18:40.27:0,40,256	0/0:29,1:30:55.29:0,55,837	0/0:2,0:7:20.19:0,20,126
chr10	102195875	.	TC	T	5956.73	PASS	AB=0.518;AC=17;AF=0.304;AN=56;BaseQRankSum=18.432;DP=662;FS=16.654;HRun=3;HaplotypeScore=85.7927;InbreedingCoeff=0.9424;MQ=90.89;MQ0=0;MQRankSum=-1.646;QD=32.55;ReadPosRankSum=3.209;VQSLOD=3.3561;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:81.25:1000,81,0	1/1:0,4:4:12.04:149,12,0	0/0:29,0:29:81.26:0,81,1142	0/0:22,0:22:57.18:0,57,795	1/1:0,30:30:78.14:931,78,0	0/0:23,0:23:66.21:0,66,931	0/0:24,0:24:72.24:0,72,1036	0/0:31,0:31:87.29:0,87,1235	0/0:24,0:24:72.23:0,72,1009	0/0:23,0:23:69.23:0,69,993	0/0:29,0:29:87.29:0,87,1252	1/1:0,16:16:45.14:558,45,0	1/1:1,23:24:66.21:814,66,0	0/0:32,0:32:96.31:0,96,1358	0/0:18,0:18:51.16:0,51,715	1/1:1,25:26:66.21:818,66,0	0/0:33,0:33:99:0,99,1406	1/1:0,16:16:45.14:558,45,0	0/0:16,0:16:45.10:0,45,606	0/0:25,0:25:75.24:0,75,1055	0/0:31,0:31:87.25:0,87,1212	0/0:18,0:18:54.18:0,54,777	0/0:26,0:26:75.23:0,75,1058	0/0:31,0:31:93.30:0,93,1322	0/0:17,0:17:48.16:0,48,691	0/1:2,27:29:2.18:870,0,2	0/0:27,0:27:81.26:0,81,1149	1/1:0,7:7:21.07:260,21,0
chr10	102198764	.	A	ACATCATCAT	4029.57	PASS	AB=1.000;AC=15;AF=0.288;AN=52;BaseQRankSum=-2.569;DP=653;FS=5.750;HRun=0;HaplotypeScore=190.0263;InbreedingCoeff=0.8192;MQ=62.21;MQ0=2;MQRankSum=-6.823;QD=22.26;ReadPosRankSum=-1.521;VQSLOD=2.6891;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,8:21:9.03:405,9,0	1/1:6,3:9:12.04:388,12,0	0/0:28,0:23:12.04:0,12,264	0/0:27,0:21:8.68:0,9,138	./.	0/0:24,0:24:48.16:0,48,1263	0/0:31,0:31:39.13:0,39,997	0/0:31,0:33:2.53:0,3,63	0/0:27,0:27:42.14:0,42,1070	0/0:38,0:37:69.23:0,69,1775	0/0:15,0:16:36.10:0,36,865	1/1:23,15:38:24.08:956,24,0	1/1:30,1:30:21.04:720,21,0	0/0:26,0:26:60.16:0,60,1470	0/0:31,0:31:60.19:0,60,1589	1/1:22,8:29:6.02:274,6,0	0/0:18,0:18:28.16:0,28,1119	1/1:6,0:6:0.47:1,0,0	0/0:6,0:13:15.05:0,15,314	0/0:5,0:22:0:0,0,0	0/1:15,0:21:0:0,0,0	0/0:21,0:21:39.13:0,39,994	0/0:25,0:25:39.13:0,39,904	0/0:25,0:26:51.06:0,51,1323	0/0:14,0:15:33.11:0,33,880	1/1:13,10:23:33.09:1285,33,0	0/0:10,0:24:27.09:0,27,512	./.
chr10	102198769	.	A	ATCATCATCA	4031.14	PASS	AC=14;AF=0.280;AN=50;BaseQRankSum=-2.446;DP=653;FS=5.748;HRun=0;HaplotypeScore=187.4421;InbreedingCoeff=0.8598;MQ=62.64;MQ0=4;MQRankSum=-6.405;QD=25.84;ReadPosRankSum=-1.173;VQSLOD=2.8257;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:12.04:540,12,0	1/1:8,0:8:12.04:388,12,0	0/0:30,0:22:11.26:0,11,263	0/0:37,0:23:8.71:0,9,155	./.	0/0:23,0:23:48.16:0,48,1263	0/0:31,0:31:39.13:0,39,997	0/0:31,0:31:5.91:0,6,68	0/0:26,0:26:42.14:0,42,1070	0/0:37,0:36:69.23:0,69,1775	0/0:16,0:16:36.10:0,36,865	1/1:36,0:36:24.08:956,24,0	1/1:21,8:29:18.03:587,18,0	0/0:26,0:26:60.16:0,60,1470	0/0:29,0:29:60.19:0,60,1589	1/1:29,0:27:6.02:274,6,0	0/0:18,0:18:28.16:0,28,1119	1/1:6,0:6:0.47:1,0,0	0/0:13,0:13:15.05:0,15,314	0/0:22,0:22:0:0,0,0	./.	0/0:20,0:20:39.13:0,39,994	0/0:24,0:24:39.13:0,39,904	0/0:26,0:26:51.06:0,51,1323	0/0:15,0:15:33.11:0,33,880	1/1:27,0:26:33.09:1285,33,0	0/0:24,0:24:27.09:0,27,512	./.
chr10	102198801	.	TTC	T	604.10	PASS	AB=0.877;AC=9;AF=0.173;AN=52;BaseQRankSum=5.609;DP=645;FS=0.000;HRun=0;HaplotypeScore=116.5936;InbreedingCoeff=0.3799;MQ=59.24;MQ0=26;MQRankSum=-4.534;QD=5.25;ReadPosRankSum=-2.130;VQSLOD=2.7292;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:0:0,0,1	./.	0/0:68,0:22:24.75:0,25,240	0/0:75,0:22:7.85:0,8,165	./.	0/0:25,0:25:48.12:0,48,710	0/0:26,0:26:24.95:0,25,561	1/1:9,14:23:30.02:468,30,0	0/0:24,0:24:54.04:0,54,777	0/0:29,0:28:65.55:0,66,937	0/0:22,0:22:47.91:0,48,635	0/0:24,0:24:2.59:0,3,19	0/0:15,0:13:0.47:0,0,1	0/0:30,0:30:58.97:0,59,859	0/0:30,0:30:55.58:0,56,756	0/1:14,0:12:0.21:0,0,0	0/0:27,0:26:54.08:0,54,772	0/0:2,0:8:6.01:0,6,66	0/1:11,2:12:22.86:132,0,23	0/1:14,11:25:12.93:13,0,32	1/1:8,1:9:2.63:11,3,0	0/0:20,0:20:44.92:0,45,619	0/0:18,0:18:45.15:0,45,693	0/0:27,0:27:57:0,57,752	0/0:17,0:17:29.98:0,30,416	0/0:19,0:18:10.57:0,11,76	0/1:22,6:28:53.64:102,0,54	0/1:3,0:3:0:0,0,0
chr10	102198813	.	C	CTA	873.62	PASS	AB=0.937;AC=7;AF=0.135;AN=52;BaseQRankSum=7.109;DP=707;FS=3.491;HRun=0;HaplotypeScore=124.2212;InbreedingCoeff=0.0163;MQ=58.33;MQ0=38;MQRankSum=-5.722;QD=5.36;ReadPosRankSum=0.199;VQSLOD=3.1229;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:0.13:0,0,1	./.	0/0:59,0:17:21.30:0,21,212	0/0:78,0:18:14.18:0,14,212	./.	0/0:29,0:29:66.10:0,66,855	0/0:31,0:31:63.10:0,63,780	0/1:35,0:34:66.75:211,0,67	0/0:28,0:28:68.73:0,69,888	0/0:26,0:25:72.17:0,72,983	0/0:20,0:20:51.13:0,51,715	0/0:21,0:21:2.60:0,3,19	0/0:14,0:12:2.23:0,2,6	0/0:30,0:30:74.96:0,75,1016	0/0:28,0:28:62.82:0,63,828	0/0:12,0:10:2.55:0,3,18	0/0:36,0:36:86.64:0,87,984	0/1:9,0:9:15.99:16,0,16	0/1:18,0:17:62.08:62,0,109	0/1:30,3:33:15.48:162,0,15	0/1:18,1:19:42.88:43,0,67	0/0:20,0:20:51.13:0,51,716	0/0:25,0:25:66.10:0,66,847	0/0:35,0:35:80.68:0,81,966	0/0:26,0:26:50.74:0,51,609	0/0:16,0:15:41.53:0,42,287	0/1:19,15:33:10.75:498,0,11	0/0:3,0:3:0:0,0,0
chr10	102198817	.	ATC	A	247.81	PASS	AB=0.918;AC=12;AF=0.231;AN=52;BaseQRankSum=2.002;DP=700;FS=0.697;HRun=0;HaplotypeScore=116.0588;InbreedingCoeff=-0.1475;MQ=57.12;MQ0=39;MQRankSum=2.716;QD=0.85;ReadPosRankSum=-1.470;VQSLOD=1.8168;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:2.99:0,3,25	./.	0/0:55,0:14:0:0,0,1	0/0:76,0:17:0:0,0,1	./.	0/0:30,0:30:18.18:0,18,398	0/1:25,6:31:24.60:25,0,436	0/0:35,0:33:9.93:0,10,68	0/0:28,1:29:2.03:0,2,563	0/1:23,2:24:35.72:36,0,301	0/1:20,1:21:53.27:53,0,408	0/0:16,0:16:0.47:0,0,2	0/0:14,0:12:0.94:0,1,2	0/1:26,1:29:26:26,0,308	0/1:20,5:25:3.60:4,0,299	0/0:13,0:11:1.44:0,1,9	0/1:37,0:36:37.68:38,0,700	0/0:10,0:10:6.48:0,6,67	0/0:20,0:19:13.92:0,14,107	0/0:30,0:30:14.97:0,15,129	0/0:19,0:19:2.99:0,3,23	0/1:20,2:22:66.54:67,0,266	0/1:27,0:27:29.17:29,0,364	0/1:30,5:35:2.71:3,0,453	0/1:24,2:27:85.65:86,0,190	1/1:13,0:12:1.25:3,1,0	0/0:31,0:29:43.03:0,43,306	0/0:3,0:3:0:0,0,0
chr10	102199149	.	C	CTTTTT	4235.21	PASS	AB=0.627;AC=14;AF=0.250;AN=56;BaseQRankSum=7.219;DP=540;FS=2.929;HRun=7;HaplotypeScore=102.0952;InbreedingCoeff=0.7482;MQ=58.75;MQ0=17;MQRankSum=-8.688;QD=32.83;ReadPosRankSum=-3.367;VQSLOD=1.5398;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,10:31:53.35:1061,53,0	1/1:5,0:5:3.01:74,3,0	0/0:32,0:11:20.96:0,21,332	0/0:21,0:11:20.77:0,21,328	1/1:6,5:13:15.01:246,15,0	0/0:17,0:17:48.15:0,48,839	0/0:28,0:28:54.11:0,54,1105	0/0:28,0:26:63.17:0,63,1053	0/0:17,0:17:39.09:0,39,658	0/0:19,0:19:51.15:0,51,894	0/0:22,0:22:48.12:0,48,844	1/1:12,4:17:33.09:584,33,0	1/1:4,9:15:15.05:345,15,0	0/0:16,0:16:39.10:0,39,685	0/0:15,0:15:39.08:0,39,655	0/1:7,12:20:14.10:912,0,14	0/0:26,0:26:69.20:0,69,1185	0/0:18,0:18:51.11:0,51,791	0/0:24,0:21:51.14:0,51,896	0/0:19,0:19:33.03:0,33,571	0/0:19,0:18:45.13:0,45,786	0/0:15,0:15:39.08:0,39,654	0/0:18,0:18:44.97:0,45,763	0/0:23,0:23:63.18:0,63,1078	0/0:12,0:12:33.11:0,33,581	0/1:10,11:22:60.65:838,0,61	0/0:21,0:21:54.14:0,54,935	1/1:0,3:5:6.02:176,6,0
chr10	102199307	.	CGTGTGTGTGT	C	531.07	PASS	AB=0.855;AC=10;AF=0.217;AN=46;BaseQRankSum=3.969;DP=509;FS=0.000;HRun=0;HaplotypeScore=133.9233;InbreedingCoeff=0.4634;MQ=64.66;MQ0=20;MQRankSum=-4.458;QD=5.36;ReadPosRankSum=-1.545;VQSLOD=2.3258;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,1:30:3.01:46,3,0	1/1:4,2:5:3.01:88,3,0	./.	./.	./.	0/0:16,0:18:18.06:0,18,610	0/0:23,0:23:11.98:0,12,515	./.	0/0:15,0:15:15.52:0,16,689	0/0:17,0:16:18.06:0,18,570	0/0:17,0:17:18.06:0,18,588	1/1:10,1:11:3.01:88,3,0	1/1:12,3:15:5.10:175,5,0	0/0:13,0:13:21.07:0,21,685	0/0:13,0:13:15.05:0,15,553	./.	0/0:25,0:28:40.02:0,40,1163	0/0:13,0:17:10.99:0,11,104	0/0:19,0:19:6.01:0,6,94	0/0:13,0:11:6.02:0,6,109	0/0:28,0:27:12.49:0,12,142	0/0:17,0:17:18.05:0,18,454	0/0:12,0:12:12.04:0,12,458	0/0:28,0:32:15.36:0,15,1296	0/0:13,0:13:18.06:0,18,779	0/1:18,0:20:17.90:130,0,18	0/1:12,1:16:24.59:130,0,25	0/0:9,0:9:0:0,0,0
chr10	102199544	.	TC	T	1643.98	PASS	AB=0.911;AC=13;AF=0.232;AN=56;BaseQRankSum=4.863;DP=455;FS=7.957;HRun=10;HaplotypeScore=52.9713;InbreedingCoeff=0.6952;MQ=75.47;MQ0=0;MQRankSum=-2.063;QD=11.18;ReadPosRankSum=1.032;VQSLOD=2.2854;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:17:20.20:0,20,121	0/0:0,0:4:8.52:0,9,43	0/0:17,0:15:28.04:0,28,286	0/1:19,0:16:3.09:3,0,198	0/0:9,0:18:26.18:0,26,182	0/0:15,0:15:13.05:0,13,341	0/0:21,1:22:24.96:0,25,487	1/1:11,11:22:19.04:264,19,0	0/0:22,0:22:33.15:0,33,560	0/0:15,0:15:36.10:0,36,398	0/0:14,0:14:27.07:0,27,299	0/0:3,0:11:14.20:0,14,71	0/0:4,0:11:14.57:0,15,89	0/0:14,1:15:10.03:0,10,328	0/0:13,2:16:18.92:0,19,420	0/0:6,0:15:31.76:0,32,198	0/0:23,0:23:63.16:0,63,688	0/0:9,0:9:27.07:0,27,299	1/1:3,10:13:32.02:264,32,0	1/1:2,27:29:77.69:656,78,0	1/1:1,10:11:23.99:208,24,0	0/0:19,0:19:44.20:0,44,473	0/0:17,0:17:47.96:0,48,511	0/0:22,1:23:28.09:0,28,529	0/1:15,2:18:7.31:7,0,348	0/1:16,4:20:87.43:87,0,238	1/1:1,14:15:11.82:331,12,0	0/0:5,0:5:11.96:0,12,102
chr10	102200601	.	GAA	G	4830.32	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=13.266;DP=683;FS=0.648;HRun=12;HaplotypeScore=102.4080;InbreedingCoeff=0.9864;MQ=69.11;MQ0=1;MQRankSum=-1.244;QD=16.10;ReadPosRankSum=3.847;VQSLOD=3.9820;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:16:24.67:107,25,0	1/1:2,0:14:32.93:142,33,0	0/0:16,0:16:23.56:0,24,282	0/0:7,0:7:8.97:0,9,90	1/1:6,0:46:95.93:414,96,0	0/0:23,1:25:29.17:0,29,753	0/0:17,0:19:53.65:0,54,734	1/1:8,22:34:64.99:666,65,0	0/0:22,0:22:51.16:0,51,717	0/0:25,0:29:80.70:0,81,1078	0/0:25,0:26:65.70:0,66,919	1/1:6,0:25:38.41:166,38,0	1/1:3,0:18:35.67:154,36,0	0/0:17,0:17:42.09:0,42,551	0/0:26,0:29:79.71:0,80,1063	1/1:2,0:22:52.14:225,52,0	0/0:34,0:35:96.25:0,96,1325	0/0:23,1:26:36.02:0,36,814	1/1:2,23:25:62.80:612,63,0	1/1:6,36:45:97.10:1020,97,0	1/1:3,19:22:57.12:580,57,0	0/0:19,0:23:59.15:0,59,773	0/0:28,0:32:78.22:0,78,1092	0/0:13,0:13:30.10:0,30,447	0/0:19,0:21:59.68:0,60,841	0/0:11,0:32:75.13:0,75,810	1/1:4,27:32:74.89:744,75,0	0/0:4,0:9:12.01:0,12,114
chr10	102200722	.	TA	T	408.61	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.154;DP=631;FS=3.779;HRun=2;HaplotypeScore=60.0879;InbreedingCoeff=0.9775;MQ=72.42;MQ0=0;MQRankSum=-1.106;QD=34.05;ReadPosRankSum=0.221;VQSLOD=3.7694;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.30:0,96,1502	0/0:5,0:5:15.05:0,15,240	0/0:17,0:17:28.07:0,28,640	0/0:7,0:7:21.05:0,21,278	0/0:32,0:32:93.30:0,93,1460	0/0:27,0:27:81.26:0,81,1267	0/0:23,0:23:69.24:0,69,1094	0/0:30,0:30:90.29:0,90,1394	0/0:24,0:24:69.24:0,69,1099	0/0:30,0:30:90.30:0,90,1415	0/0:20,0:20:60.20:0,60,955	0/0:22,0:22:66.20:0,66,1002	0/0:18,0:18:54.18:0,54,859	0/0:30,0:30:90.31:0,90,1432	0/0:32,0:32:96.30:0,96,1486	0/0:20,0:20:60.19:0,60,925	0/0:19,0:19:57.17:0,57,860	1/1:0,12:12:36.12:503,36,0	0/0:18,0:18:54.18:0,54,864	0/0:25,0:25:75.26:0,75,1189	0/0:25,0:25:75.26:0,75,1191	0/0:29,0:29:87.30:0,87,1382	0/0:23,0:23:69.24:0,69,1103	0/0:12,0:12:33.11:0,33,528	0/0:31,0:31:93.30:0,93,1451	0/0:32,0:32:96.33:0,96,1530	0/0:28,0:28:84.27:0,84,1305	0/0:8,0:8:24.08:0,24,373
chr10	102202314	.	G	GCACA	7624.80	PASS	AB=0.803;AC=28;AF=0.500;AN=56;BaseQRankSum=-3.580;DP=737;FS=0.857;HRun=0;HaplotypeScore=125.6153;InbreedingCoeff=0.8085;MQ=62.15;MQ0=11;MQRankSum=1.966;QD=19.16;ReadPosRankSum=-0.172;VQSLOD=4.5018;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,27:51:52.91:1061,53,0	1/1:3,5:8:11.89:268,12,0	0/0:42,0:23:15.04:0,15,194	0/0:34,0:23:24.01:0,24,326	1/1:13,19:36:23.82:452,24,0	0/0:16,0:19:30.09:0,30,442	0/0:28,0:28:45.13:0,45,696	1/1:31,0:30:33.98:490,34,0	0/0:23,0:23:42.14:0,42,670	0/0:25,0:27:53.69:0,54,698	0/0:12,0:15:27.08:0,27,392	0/1:8,13:23:30.51:283,0,31	1/1:14,2:26:26.77:466,27,0	0/0:17,0:19:20.55:0,21,445	0/0:18,0:22:35.59:0,36,651	1/1:7,21:31:8.20:767,8,0	0/0:18,0:21:48.15:0,48,732	1/1:9,11:25:14.79:301,15,0	1/1:12,2:16:29.15:432,29,0	1/1:18,2:22:20.50:331,20,0	1/1:14,20:37:29.84:663,30,0	0/1:24,0:25:4.63:5,0,623	0/0:17,0:19:5.23:0,5,344	0/0:48,0:49:75.23:0,75,1162	0/0:19,0:20:30.08:0,30,436	1/1:18,17:35:2.60:1009,3,0	1/1:14,6:21:39.13:868,39,0	1/1:3,6:10:11.78:229,12,0
chr10	102202381	.	AAGAGAGAG	A	526.88	PASS	AB=0.944;AC=20;AF=0.500;AN=40;BaseQRankSum=1.354;DP=573;FS=0.000;HRun=0;HaplotypeScore=153.7415;InbreedingCoeff=0.1807;MQ=59.28;MQ0=16;MQRankSum=-0.921;QD=2.13;ReadPosRankSum=0.813;VQSLOD=2.6773;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:18.76:0,19,193	1/1:4,0:5:2.90:16,3,0	./.	./.	0/0:18,0:18:0:0,0,0	0/1:16,0:16:0:0,0,0	1/1:16,0:21:3.01:49,3,0	./.	0/1:15,5:20:73.70:97,0,74	0/0:21,0:19:0.47:0,0,1	./.	0/1:16,0:18:6.31:6,0,62	0/0:19,0:18:2.74:0,3,28	./.	1/1:18,0:18:6:54,6,0	0/0:16,0:16:6.02:0,6,96	0/1:22,0:20:73.36:73,0,119	1/1:25,0:24:3.44:21,3,0	./.	./.	0/1:25,0:24:0.13:0,0,0	1/1:11,0:12:5.98:80,6,0	0/0:23,0:23:2.88:0,3,15	0/1:26,1:26:6.45:124,0,6	1/1:18,0:18:2.94:18,3,0	0/0:21,0:20:0:0,0,0	1/1:16,0:19:6.02:102,6,0	./.
chr10	102204469	.	TCACACACA	T	4621.25	PASS	AB=0.742;AC=23;AF=0.426;AN=54;BaseQRankSum=9.292;DP=581;FS=8.905;HRun=0;HaplotypeScore=168.8933;InbreedingCoeff=0.8259;MQ=59.40;MQ0=13;MQRankSum=-9.619;QD=19.10;ReadPosRankSum=-0.053;VQSLOD=3.2367;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:38:48.14:0,48,1657	0/0:8,0:8:12.04:0,12,468	0/0:29,0:10:2.97:0,3,20	./.	0/0:17,0:20:27.04:0,27,671	1/1:10,9:20:36.57:708,37,0	1/1:14,12:26:27.09:505,27,0	0/0:19,0:19:15.52:0,16,412	1/1:14,7:23:33.53:501,34,0	0/0:19,0:19:45.14:0,45,1436	0/0:19,0:21:27.09:0,27,949	0/0:22,0:24:27.09:0,27,782	0/0:20,0:20:45.13:0,45,1702	1/1:13,14:28:31.05:542,31,0	1/1:11,14:29:36.04:572,36,0	0/0:26,0:26:45.12:0,45,1678	0/0:16,0:16:4.77:0,5,24	1/1:7,0:9:6.02:112,6,0	0/0:14,0:14:15.05:0,15,424	0/0:13,0:12:14.90:0,15,474	0/0:33,0:32:24.08:0,24,678	1/1:11,6:18:15.01:240,15,0	1/1:13,7:21:22.01:363,22,0	1/1:17,8:26:6.49:109,6,0	1/1:7,7:15:18.52:322,19,0	0/1:15,8:23:89.53:472,0,90	0/0:11,0:11:18.01:0,18,493	1/1:0,2:3:9.01:175,9,0
chr10	102204512	.	C	CACAG	3614.31	PASS	AB=0.722;AC=25;AF=0.446;AN=56;BaseQRankSum=-1.532;DP=798;FS=2.073;HRun=0;HaplotypeScore=194.0093;InbreedingCoeff=0.6760;MQ=53.89;MQ0=29;MQRankSum=1.794;QD=8.52;ReadPosRankSum=-1.167;VQSLOD=2.9258;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,126,1318	0/0:17,0:16:44.20:0,44,434	0/0:26,0:8:23.78:0,24,190	0/0:31,0:11:16.05:0,16,129	0/0:21,0:21:44.92:0,45,444	0/1:21,0:21:5.86:165,0,6	1/1:28,0:28:32.36:256,32,0	0/1:27,0:25:1.75:2,0,463	1/1:32,0:32:3.52:345,4,0	0/0:45,0:44:99:0,112,1159	0/0:22,0:22:53.99:0,54,619	0/0:29,0:29:25.58:0,26,558	0/0:29,0:29:84.02:0,84,1085	1/1:27,0:27:10.65:240,11,0	1/1:36,0:36:36.84:349,37,0	0/0:41,0:41:99:0,112,1284	1/1:23,0:23:31.03:286,31,0	0/0:14,0:13:32.68:0,33,257	1/1:14,0:13:35.85:304,36,0	0/1:7,27:36:10.71:293,0,11	0/1:7,50:59:7.90:196,0,8	1/1:19,0:18:26.79:225,27,0	1/1:25,0:25:42.42:333,42,0	1/1:31,0:31:26.65:219,27,0	1/1:21,0:21:32.59:296,33,0	0/0:34,0:32:85.84:0,86,797	0/1:2,14:20:8.33:105,0,8	0/0:13,0:13:25.86:0,26,273
chr10	102204655	.	TAC	T	12402.34	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=13.064;DP=789;FS=2.666;HRun=0;HaplotypeScore=102.3060;InbreedingCoeff=0.9577;MQ=61.20;MQ0=12;MQRankSum=-1.140;QD=24.13;ReadPosRankSum=0.738;VQSLOD=5.7275;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,1:48:99:0,106,1701	0/0:10,0:10:24.08:0,24,373	0/0:39,0:23:17.72:0,18,498	0/1:41,0:27:0:0,0,296	0/0:30,1:30:32.42:0,32,1165	1/1:2,23:26:68.95:824,69,0	1/1:9,17:26:36.11:443,36,0	1/1:7,23:29:63.02:741,63,0	1/1:8,21:27:51.16:628,51,0	0/0:26,0:26:57.19:0,57,910	0/0:24,0:24:72.21:0,72,1118	0/0:24,0:24:54.18:0,54,856	0/0:32,0:32:47.65:0,48,1274	1/1:2,25:28:69.05:826,69,0	1/1:5,22:26:60.19:738,60,0	0/0:40,1:41:74.42:0,74,1653	1/1:1,22:22:54.17:665,54,0	1/1:2,22:24:54.14:649,54,0	1/1:5,12:15:33.09:395,33,0	1/1:1,35:36:96.23:1149,96,0	1/1:11,28:39:69.22:849,69,0	1/1:6,22:28:57.18:701,57,0	1/1:5,31:35:65.90:811,66,0	1/1:3,24:26:51.16:628,51,0	1/1:2,20:21:57.18:702,57,0	1/1:5,20:25:19.18:694,19,0	1/1:3,18:21:54.17:665,54,0	1/1:0,8:8:24.08:295,24,0
chr10	102207049	.	TG	T	16703.68	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=10.129;DP=811;FS=0.000;HRun=3;HaplotypeScore=86.4607;InbreedingCoeff=0.9913;MQ=85.56;MQ0=0;MQRankSum=-5.383;QD=33.08;ReadPosRankSum=2.746;VQSLOD=5.1690;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,150,2132	0/0:10,0:10:30.10:0,30,431	0/0:21,0:21:57.17:0,57,781	0/0:31,1:32:53.86:0,54,1044	0/0:28,0:28:81.23:0,81,1111	1/1:0,23:23:60.19:744,60,0	1/1:2,33:35:90.28:1116,90,0	1/1:1,21:22:60.16:718,60,0	1/1:1,33:34:96.30:1190,96,0	0/0:32,0:32:90.28:0,90,1247	0/0:19,0:19:57.18:0,57,790	0/0:31,0:31:93.31:0,93,1339	0/0:38,0:38:99:0,111,1534	1/1:1,32:33:93.29:1153,93,0	1/1:1,39:40:99:1265,102,0	0/0:43,1:44:95.24:0,95,1818	1/1:0,26:26:75.19:913,75,0	1/1:0,22:22:57.18:707,57,0	1/1:2,21:23:63.20:781,63,0	1/1:0,35:35:96.30:1190,96,0	1/1:1,38:39:99:1339,108,0	1/1:2,26:28:72.23:893,72,0	1/1:1,22:23:54.17:669,54,0	1/1:0,24:24:69.22:855,69,0	1/1:0,22:22:60.16:744,60,0	1/1:2,35:37:65.36:1241,65,0	1/1:0,35:35:87.27:1076,87,0	1/1:0,4:4:9.03:112,9,0
chr10	102209144	.	G	GA	853.79	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.192;DP=714;FS=4.524;HRun=7;HaplotypeScore=74.2584;InbreedingCoeff=0.9182;MQ=58.00;MQ0=8;MQRankSum=-0.054;QD=25.87;ReadPosRankSum=-0.511;VQSLOD=4.1352;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,162,1538	0/0:15,0:15:45.06:0,45,429	0/0:5,0:5:9.01:0,9,87	0/0:7,0:6:14.99:0,15,133	0/0:33,0:33:87.13:0,87,839	0/0:19,0:19:57.09:0,57,550	0/0:31,0:29:75.08:0,75,710	0/0:34,0:34:90.13:0,90,868	0/0:22,0:22:60.09:0,60,579	0/0:36,0:36:87.09:0,87,826	0/0:22,0:22:51.08:0,51,492	0/0:32,0:32:75.10:0,75,718	0/0:24,0:23:57.09:0,57,550	0/0:24,0:24:63.08:0,63,601	0/0:22,0:21:51.06:0,51,487	0/0:20,0:20:54.09:0,54,521	0/0:33,0:33:79.74:0,80,816	0/0:21,0:21:50.07:0,50,455	0/0:17,0:17:48.08:0,48,463	0/0:39,0:38:87.08:0,87,829	0/0:25,0:24:54.07:0,54,521	0/0:28,0:27:72.10:0,72,689	0/0:22,0:22:48.04:0,48,452	0/0:31,0:30:78.12:0,78,753	0/0:29,0:29:75.11:0,75,720	1/1:18,4:22:57.06:630,57,0	0/0:31,0:31:90.12:0,90,862	1/1:8,3:11:7.19:336,7,0
chr10	102209156	.	TA	T	924.32	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.959;DP=738;FS=2.073;HRun=8;HaplotypeScore=75.5899;InbreedingCoeff=0.9981;MQ=61.25;MQ0=4;MQRankSum=0.424;QD=23.11;ReadPosRankSum=-0.952;VQSLOD=3.9695;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,175,2079	0/0:20,0:20:48.13:0,48,568	0/0:9,0:8:24.07:0,24,288	0/0:10,0:9:27.08:0,27,323	0/0:34,0:34:96.29:0,96,1160	0/0:23,0:23:69.14:0,69,814	0/0:27,0:27:72.16:0,72,832	0/0:36,0:36:96.29:0,96,1159	0/0:24,0:24:66.19:0,66,782	0/0:36,0:36:99:0,99,1183	0/0:19,0:19:48.15:0,48,580	0/0:32,0:32:84.23:0,84,984	0/0:22,1:22:37.20:0,37,711	0/0:25,0:25:69.21:0,69,833	0/0:24,0:23:69.21:0,69,834	0/0:20,0:20:54.17:0,54,652	0/0:35,0:35:96.27:0,96,1135	0/0:21,0:21:53.77:0,54,609	0/0:23,0:23:51.15:0,51,607	0/0:32,0:32:81.25:0,81,979	0/0:23,0:22:63.13:0,63,730	0/0:27,0:27:75.23:0,75,899	0/0:21,0:21:54.16:0,54,642	0/0:32,0:31:81.25:0,81,978	0/0:26,0:26:75.23:0,75,906	1/1:14,13:27:81.11:770,81,0	0/0:34,0:34:87.26:0,87,1040	1/1:11,2:13:29.94:276,30,0
chr10	102210746	.	AG	A	954.16	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.876;DP=716;FS=0.742;HRun=1;HaplotypeScore=67.6509;InbreedingCoeff=0.9918;MQ=70.52;MQ0=0;MQRankSum=-1.402;QD=36.70;ReadPosRankSum=2.874;VQSLOD=4.1534;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,1989	0/0:14,0:14:42.13:0,42,648	0/0:14,0:14:39.13:0,39,595	0/0:19,0:19:35.56:0,36,842	0/0:17,0:17:47.97:0,48,766	0/0:18,0:18:51.17:0,51,813	0/0:37,0:37:99:0,108,1698	0/0:34,0:34:99:0,102,1609	0/0:22,0:22:63.20:0,63,978	0/0:28,0:28:81.27:0,81,1261	0/0:18,0:18:51.17:0,51,812	0/0:30,0:30:90.29:0,90,1411	0/0:32,0:32:96.33:0,96,1531	0/0:28,0:28:84.29:0,84,1343	0/0:36,0:36:99:0,108,1646	0/0:29,0:28:87.30:0,87,1387	0/0:39,0:39:99:0,117,1794	1/1:0,26:26:75.25:1049,75,0	0/0:32,0:32:96.31:0,96,1490	0/0:15,0:15:42.14:0,42,667	0/0:51,0:51:99:0,150,2362	0/0:26,0:25:69.24:0,69,1100	0/0:18,0:18:51.09:0,51,785	0/0:22,0:22:66.18:0,66,1024	0/0:26,0:26:75.26:0,75,1195	0/0:21,0:21:63.21:0,63,1005	0/0:16,0:16:48.16:0,48,767	0/0:6,0:6:18.06:0,18,288
chr10	102211053	.	A	AAC	738.07	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-2.020;DP=595;FS=0.860;HRun=0;HaplotypeScore=81.6031;InbreedingCoeff=0.7757;MQ=59.99;MQ0=12;MQRankSum=1.449;QD=21.09;ReadPosRankSum=0.798;VQSLOD=3.7172;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:78.21:0,78,963	0/0:12,0:12:22.77:0,23,303	0/0:33,0:12:12.51:0,13,149	0/0:29,0:14:28.30:0,28,314	0/0:13,0:13:36.12:0,36,456	0/0:21,0:20:45.13:0,45,558	0/0:26,0:26:51.13:0,51,615	0/0:30,0:28:63.16:0,63,746	0/0:20,0:20:51.14:0,51,622	0/0:23,0:22:57.17:0,57,703	0/0:8,0:8:18.06:0,18,229	0/0:25,0:25:50.97:0,51,618	0/0:23,0:23:51.09:0,51,600	0/0:23,0:23:35.83:0,36,431	0/0:23,0:23:36.10:0,36,444	0/0:27,0:27:69.17:0,69,825	0/0:28,0:28:74.98:0,75,899	0/1:11,0:11:2.53:3,0,239	0/0:18,0:15:33.06:0,33,382	0/0:14,0:14:33.11:0,33,419	0/0:31,0:30:60.18:0,60,753	0/0:10,0:10:21.05:0,21,252	0/0:20,0:19:27.09:0,27,344	0/0:28,0:28:48.13:0,48,594	0/0:13,0:13:36.11:0,36,447	1/1:7,12:18:24.50:748,24,0	0/0:15,0:15:29.66:0,30,380	1/1:3,2:5:6.02:100,6,0
chr10	102211078	.	A	AC	226.12	PASS	AB=0.803;AC=2;AF=0.036;AN=56;BaseQRankSum=6.160;DP=626;FS=5.143;HRun=1;HaplotypeScore=94.3972;InbreedingCoeff=0.1364;MQ=46.56;MQ0=48;MQRankSum=-6.443;QD=6.65;ReadPosRankSum=-2.854;VQSLOD=-0.4162;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:47:65.45:0,65,807	0/0:7,0:7:21.01:0,21,253	0/0:50,0:8:23.94:0,24,288	0/0:47,0:12:35.79:0,36,438	0/0:21,0:21:42.10:0,42,525	0/0:24,0:23:40.25:0,40,510	0/0:25,0:22:36.36:0,36,501	0/0:30,0:22:57.18:0,57,738	0/0:17,0:17:35.41:0,35,464	0/0:20,0:16:45.15:0,45,581	0/0:8,0:8:24.05:0,24,282	0/0:24,0:24:60.63:0,61,746	0/0:21,0:20:42.14:0,42,544	0/0:21,0:20:24.99:0,25,347	0/0:23,0:21:31.58:0,32,428	0/0:23,0:21:54.18:0,54,699	0/0:27,0:26:51.43:0,51,718	0/1:5,6:11:5.74:294,0,6	0/0:18,0:14:36.11:0,36,459	0/0:12,0:11:25.55:0,26,300	0/0:32,0:27:54.13:0,54,665	0/0:14,0:12:13.81:0,14,195	0/0:17,0:14:26.86:0,27,350	0/0:30,0:30:48.16:0,48,619	0/0:16,0:16:36.05:0,36,433	0/1:22,1:19:19.76:20,0,530	0/0:12,0:12:21.67:0,22,342	0/0:3,1:4:7.57:0,8,82
chr10	102211089	.	C	CCACA	1975.82	PASS	AB=0.821;AC=33;AF=0.660;AN=50;BaseQRankSum=-0.545;DP=616;FS=6.210;HRun=0;HaplotypeScore=118.5807;InbreedingCoeff=0.2190;MQ=45.29;MQ0=52;MQRankSum=-3.895;QD=4.55;ReadPosRankSum=-2.306;VQSLOD=1.6246;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,6:48:35.68:79,0,36	./.	./.	./.	0/1:8,0:17:6.06:6,0,122	0/1:18,4:23:33.79:74,0,34	1/1:26,1:23:11.07:160,11,0	1/1:30,0:19:2.97:20,3,0	1/1:10,1:16:8.76:119,9,0	0/0:16,0:11:17.79:0,18,220	0/0:9,0:9:17.42:0,17,228	0/0:22,0:23:14.97:0,15,309	0/0:19,0:17:11.84:0,12,166	0/1:10,2:21:2.52:130,0,3	1/1:14,2:22:9.03:150,9,0	0/0:18,0:21:21.04:0,21,265	1/1:21,2:25:22.26:337,22,0	0/1:10,0:11:29.03:42,0,29	1/1:19,0:16:3.84:21,4,0	1/1:11,0:10:6.02:133,6,0	0/1:24,4:23:61.15:61,0,83	1/1:10,1:14:9.01:120,9,0	1/1:19,0:14:3.01:39,3,0	0/1:19,5:27:80.10:129,0,80	1/1:14,2:18:1.78:134,2,0	1/1:22,0:22:24.17:165,24,0	1/1:13,0:14:1.90:166,2,0	1/1:4,0:3:3.01:55,3,0
chr10	102211255	.	G	GT	2660.53	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-11.948;DP=509;FS=0.924;HRun=8;HaplotypeScore=50.2371;InbreedingCoeff=0.9826;MQ=73.52;MQ0=0;MQRankSum=0.402;QD=25.34;ReadPosRankSum=-1.598;VQSLOD=3.7066;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:43.20:0,43,540	0/0:7,0:7:15:0,15,137	0/0:12,0:12:21.90:0,22,194	0/0:11,0:11:20.80:0,21,180	0/0:19,0:19:44.76:0,45,393	0/0:29,0:29:78:0,78,699	0/0:21,1:21:10.42:0,10,349	1/1:8,23:31:69.19:785,69,0	0/0:12,0:12:30.02:0,30,274	0/0:16,0:16:44.98:0,45,401	0/0:22,0:22:60.03:0,60,548	0/0:13,0:13:32.94:0,33,288	0/0:22,0:21:53.86:0,54,489	0/0:17,0:17:51:0,51,456	0/0:20,0:20:54.03:0,54,494	0/0:11,0:11:30.01:0,30,274	0/0:25,0:25:66.04:0,66,603	0/0:28,0:28:75:0,75,679	1/1:8,20:28:60.16:681,60,0	1/1:1,18:19:51.12:574,51,0	1/1:1,8:9:24.07:277,24,0	0/0:20,0:20:44.99:0,45,402	0/0:19,0:19:48.02:0,48,439	0/0:10,0:10:30.02:0,30,274	0/0:15,0:15:42:0,42,379	0/0:23,0:23:66.02:0,66,599	1/1:1,17:18:45.13:519,45,0	0/0:7,0:7:21.01:0,21,192
chr10	102211361	.	A	AT	569.76	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-6.884;DP=425;FS=5.472;HRun=9;HaplotypeScore=39.8405;InbreedingCoeff=0.7710;MQ=71.10;MQ0=0;MQRankSum=1.053;QD=13.25;ReadPosRankSum=0.324;VQSLOD=2.5834;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:44.98:0,45,390	0/0:7,0:7:14.96:0,15,125	0/0:10,0:11:20.19:0,20,157	0/0:5,0:5:11.98:0,12,98	0/0:13,0:13:35.97:0,36,308	0/0:24,0:24:65.95:0,66,566	0/0:15,0:15:38.92:0,39,326	0/0:31,1:32:71.96:0,72,625	0/0:10,0:10:23.99:0,24,208	0/0:20,0:22:52.06:0,52,429	0/1:10,0:10:9.19:9,0,158	0/0:13,0:13:26.96:0,27,231	0/0:14,0:14:41.99:0,42,365	0/0:8,0:8:23.98:0,24,205	0/0:14,0:14:38.99:0,39,339	0/0:12,0:12:32.99:0,33,286	0/0:25,0:25:56.98:0,57,495	0/0:23,0:23:56.98:0,57,495	0/0:23,0:23:56.96:0,57,489	0/0:15,0:15:44.99:0,45,391	0/0:6,0:6:18:0,18,156	0/0:12,0:12:26.98:0,27,234	0/0:21,0:20:50.98:0,51,443	0/0:15,0:15:38.99:0,39,339	0/0:10,0:10:23.98:0,24,208	1/1:3,16:19:25.05:486,25,0	0/0:14,0:14:38.99:0,39,339	1/1:1,13:14:18.05:199,18,0
chr10	102211697	.	AATATATATATATATATATATATATATATATATAT	A	7255.94	PASS	AB=1.000;AC=25;AF=0.658;AN=38;BaseQRankSum=2.183;DP=265;FS=1.045;HRun=0;HaplotypeScore=185.8187;InbreedingCoeff=0.5127;MQ=63.21;MQ0=12;MQRankSum=-2.229;QD=49.70;ReadPosRankSum=1.191;VQSLOD=3.7718;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:6.02:0,6,178	./.	0/0:15,0:6:0:0,0,0	0/0:42,0:12:0.95:0,1,43	./.	1/1:10,6:17:15.05:1217,15,0	1/1:5,0:5:3:25,3,0	0/1:21,0:21:5.04:157,0,5	1/1:5,3:8:9.03:779,9,0	./.	./.	0/0:2,0:2:3.01:0,3,197	./.	1/1:2,3:5:6.02:519,6,0	1/1:5,4:9:6.02:519,6,0	./.	1/1:11,2:14:6.02:328,6,0	0/0:9,0:16:30.07:0,30,2352	1/1:8,1:9:9.90:342,10,0	1/1:14,3:18:21.07:1214,21,0	./.	1/1:4,0:4:3.01:65,3,0	1/1:8,6:14:12.04:694,12,0	./.	1/1:5,8:13:9.03:779,9,0	0/0:4,0:4:6.02:0,6,200	1/1:7,2:9:9.03:619,9,0	./.
chr10	102211730	.	AT	A	527.34	PASS	AC=24;AF=0.706;AN=34;BaseQRankSum=3.850;DP=98;FS=7.109;HRun=1;HaplotypeScore=66.6840;InbreedingCoeff=0.5326;MQ=49.47;MQ0=11;MQRankSum=-3.408;QD=10.34;ReadPosRankSum=2.268;VQSLOD=1.4903;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:2.80:0,3,13	./.	./.	0/0:21,0:4:3.59:0,4,9	0/0:2,0:2:3.01:0,3,38	1/1:7,1:7:13.61:110,14,0	./.	1/1:0,6:5:14.98:178,15,0	1/1:3,0:3:7.74:43,8,0	./.	./.	0/0:1,0:1:3:0,3,25	./.	1/1:3,0:3:4.99:18,5,0	1/1:4,0:4:5.38:38,5,0	./.	1/1:3,0:3:5.23:47,5,0	0/0:15,0:14:23.13:0,23,170	1/1:2,0:1:2.37:8,2,0	1/1:4,0:4:9.64:33,10,0	1/1:0,1:1:2.97:20,3,0	./.	1/1:7,0:7:9.03:114,9,0	./.	1/1:8,0:8:7.11:23,7,0	./.	1/1:2,0:2:4.97:18,5,0	./.
chr10	102211787	.	GT	G	1990.65	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=3.570;DP=378;FS=31.658;HRun=7;HaplotypeScore=76.1914;InbreedingCoeff=0.8985;MQ=81.17;MQ0=2;MQRankSum=1.777;QD=22.37;ReadPosRankSum=-1.514;VQSLOD=1.4938;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.12:0,39,490	0/0:3,0:3:9.03:0,9,113	0/0:19,0:14:29.87:0,30,255	0/0:21,0:18:12.29:0,12,234	0/0:6,0:6:18.06:0,18,226	0/0:24,0:23:63.12:0,63,757	0/0:16,0:16:39.11:0,39,478	1/1:3,25:28:75.06:720,75,0	0/0:20,0:20:57.14:0,57,694	0/0:7,0:7:21.07:0,21,264	0/0:8,0:8:24.06:0,24,289	0/0:6,0:6:18.06:0,18,226	0/0:7,0:7:21.07:0,21,264	0/0:15,0:15:42.01:0,42,489	0/0:18,0:18:45.14:0,45,565	0/0:2,0:2:6.02:0,6,75	0/0:25,0:25:60.13:0,60,711	0/0:22,0:22:63.17:0,63,757	1/1:4,10:14:30.03:294,30,0	1/1:1,13:14:36.08:364,36,0	1/1:0,6:6:11.99:112,12,0	0/0:11,0:10:30.08:0,30,364	0/0:14,0:14:30.09:0,30,370	0/0:10,0:10:30.10:0,30,377	0/0:17,0:17:36.11:0,36,450	0/0:3,0:3:6.02:0,6,75	1/1:2,25:27:66.15:671,66,0	0/0:2,0:2:6.02:0,6,75
chr10	102213013	.	ATTAT	A	1677.22	PASS	AC=26;AF=0.565;AN=46;BaseQRankSum=6.122;DP=234;FS=0.000;HRun=0;HaplotypeScore=40.2836;InbreedingCoeff=0.6656;MQ=65.40;MQ0=0;MQRankSum=-0.327;QD=15.11;ReadPosRankSum=-0.732;VQSLOD=2.8081;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:24.08:0,24,581	0/0:3,0:3:9.03:0,9,218	./.	./.	0/0:4,0:4:6.02:0,6,143	1/1:2,10:12:15.05:243,15,0	1/1:2,3:5:3.01:49,3,0	1/1:11,0:21:14.69:100,15,0	1/1:1,1:2:3.01:49,3,0	0/0:7,0:7:12.04:0,12,289	0/0:5,0:5:6.02:0,6,145	./.	0/0:5,0:5:12.04:0,12,290	1/1:3,1:4:3.01:49,3,0	1/1:2,2:4:6.02:97,6,0	0/0:8,0:8:9.03:0,9,193	1/1:6,13:19:33.11:535,33,0	0/0:29,1:30:11.56:0,12,1296	1/1:7,0:9:6.01:56,6,0	./.	1/1:3,0:3:3:28,3,0	1/1:1,0:1:3.01:48,3,0	1/1:1,1:2:3.01:49,3,0	./.	1/1:6,13:19:30.10:487,30,0	0/0:7,0:7:2.60:0,3,10	1/1:7,0:10:5.94:56,6,0	0/0:6,0:15:18.06:0,18,315
chr10	102218030	.	CCTCTCTCT	C	1607.47	PASS	AB=1.000;AC=24;AF=0.480;AN=50;BaseQRankSum=1.819;DP=555;FS=19.004;HRun=0;HaplotypeScore=136.1868;InbreedingCoeff=0.3843;MQ=72.03;MQ0=27;MQRankSum=3.395;QD=6.48;ReadPosRankSum=3.288;VQSLOD=1.5180;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:31:15.40:15,0,348	0/0:6,0:5:1.82:0,2,5	./.	0/0:64,0:36:0.47:0,0,1	0/1:18,0:17:23.19:23,0,110	1/1:12,0:11:16.61:338,17,0	1/1:19,1:22:5.09:124,5,0	0/0:31,0:30:17.27:0,17,318	./.	0/0:16,0:16:13.29:0,13,341	0/0:11,0:11:2.97:0,3,20	0/1:11,0:12:67.47:69,0,67	0/0:13,0:13:9.87:0,10,101	1/1:17,0:17:15.05:334,15,0	1/1:10,8:18:0.47:1,0,0	0/1:22,0:21:12.70:13,0,237	1/1:19,0:16:12.04:260,12,0	0/0:16,0:14:9.03:0,9,143	0/0:22,0:21:17.70:0,18,307	0/0:16,0:16:0.89:0,1,2	0/0:24,0:23:2.87:0,3,43	1/1:11,6:17:0.47:1,0,0	./.	1/1:23,0:19:8.52:111,9,0	1/1:12,0:14:3.01:69,3,0	1/1:7,0:13:18.06:348,18,0	0/0:25,0:24:16.76:0,17,277	1/1:6,0:7:3.01:58,3,0
chr10	102218076	.	TCACACACA	T	1008.38	PASS	AB=0.800;AC=23;AF=0.479;AN=48;BaseQRankSum=3.440;DP=423;FS=13.707;HRun=0;HaplotypeScore=95.7761;InbreedingCoeff=0.5565;MQ=38.66;MQ0=39;MQRankSum=-1.470;QD=4.78;ReadPosRankSum=0.094;VQSLOD=1.0450;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:34:22:0,22,475	0/0:5,0:4:6:0,6,136	./.	./.	0/0:24,0:22:12.04:0,12,363	0/1:15,5:18:1.71:62,0,2	1/1:15,6:20:2.80:74,3,0	0/0:23,0:22:8.92:0,9,76	1/1:15,0:16:9.03:201,9,0	0/0:12,0:12:14.84:0,15,344	0/0:11,0:10:6.02:0,6,144	0/0:13,0:13:6.02:0,6,142	0/0:13,0:13:9.03:0,9,276	1/1:11,0:11:6.02:139,6,0	1/1:22,0:21:2.32:69,2,0	0/0:21,0:19:12.04:0,12,260	1/1:23,0:16:2.51:137,3,0	0/0:7,0:5:6.59:0,7,64	0/0:8,0:8:12.01:0,12,254	./.	1/1:20,0:16:0.47:1,0,0	1/1:18,1:18:3.01:60,3,0	1/1:5,0:8:0.44:1,0,0	1/1:25,0:19:3.01:65,3,0	./.	1/1:13,0:14:3.01:58,3,0	0/0:18,0:13:3.44:0,3,21	1/1:4,0:7:15.05:293,15,0
chr10	102218694	.	TA	T	2495.84	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=4.660;DP=297;FS=1.055;HRun=2;HaplotypeScore=34.5079;InbreedingCoeff=0.8110;MQ=64.29;MQ0=0;MQRankSum=1.097;QD=32.41;ReadPosRankSum=-2.825;VQSLOD=2.3715;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:27.09:0,27,405	0/0:5,0:5:15.05:0,15,225	0/0:2,0:2:3.01:0,3,32	0/1:4,0:3:1.43:1,0,81	0/0:13,0:13:39.12:0,39,563	0/0:23,0:23:69.23:0,69,1015	0/0:4,0:4:12.04:0,12,180	1/1:1,33:34:99:1285,99,0	0/0:5,0:5:12.04:0,12,180	0/0:13,0:13:39.13:0,39,568	0/0:9,0:9:27.09:0,27,405	0/0:5,0:5:15.05:0,15,225	0/0:8,0:8:24.08:0,24,360	0/0:8,0:8:24.07:0,24,340	0/0:7,0:7:21.07:0,21,315	0/0:15,0:15:45.15:0,45,674	0/0:25,0:25:75.25:0,75,1124	0/0:15,0:15:45.15:0,45,674	1/1:1,25:26:75.23:956,75,0	1/1:0,6:6:12.04:156,12,0	1/1:1,0:1:3:25,3,0	0/0:3,0:3:9.03:0,9,135	0/0:9,0:9:27.08:0,27,385	./.	0/0:19,0:19:57.19:0,57,837	0/0:13,0:13:39.12:0,39,565	1/1:0,6:6:18.06:234,18,0	0/0:10,0:10:30.10:0,30,450
chr10	102219344	.	A	AT	1835.21	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.096;DP=717;FS=2.571;HRun=3;HaplotypeScore=65.1562;InbreedingCoeff=1.0000;MQ=88.87;MQ0=0;MQRankSum=-1.271;QD=37.45;ReadPosRankSum=2.734;VQSLOD=4.2088;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1352	0/0:17,0:17:51.14:0,51,601	0/0:24,0:25:62.15:0,62,679	0/0:26,0:27:62.09:0,62,782	0/0:25,0:25:75.23:0,75,900	0/0:23,0:23:63.19:0,63,756	0/0:15,0:15:45.14:0,45,540	0/0:38,0:38:99:0,111,1303	0/0:26,0:26:75.23:0,75,900	0/0:39,0:39:99:0,111,1316	0/0:28,0:28:81.23:0,81,959	0/0:21,0:21:63.19:0,63,756	0/0:27,0:27:75.23:0,75,900	0/0:23,0:23:66.20:0,66,792	0/0:30,0:30:81.25:0,81,972	0/0:17,0:17:48.13:0,48,564	0/0:24,0:24:72.22:0,72,863	0/0:21,0:21:57.17:0,57,684	0/0:28,0:28:78.24:0,78,936	0/0:25,0:25:75.21:0,75,887	0/0:26,0:26:75.23:0,75,900	0/0:24,0:24:69.20:0,69,817	0/0:20,0:20:60.17:0,60,708	0/0:22,0:22:63.19:0,63,756	0/0:31,0:31:90.28:0,90,1080	1/1:2,26:28:78.25:1075,78,0	0/0:26,0:26:72.20:0,72,851	1/1:0,21:21:63.21:881,63,0
chr10	102221622	.	TC	T	2714.88	PASS	AB=0.870;AC=23;AF=0.411;AN=56;BaseQRankSum=0.315;DP=373;FS=12.807;HRun=10;HaplotypeScore=47.8253;InbreedingCoeff=0.6836;MQ=79.96;MQ0=0;MQRankSum=0.236;QD=13.12;ReadPosRankSum=4.832;VQSLOD=1.6977;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:42.09:0,42,453	0/0:5,0:5:12.03:0,12,133	0/0:17,0:18:20.41:0,20,250	0/1:16,1:14:0.26:0,0,100	0/1:12,3:15:48.08:48,0,201	1/1:1,9:10:23.99:208,24,0	1/1:2,17:19:47.99:417,48,0	0/1:14,0:14:2.83:3,0,23	1/1:3,11:14:35.96:307,36,0	0/0:12,0:12:20.92:0,21,214	0/0:12,0:12:21.04:0,21,218	0/0:12,1:13:1.01:0,1,231	0/0:8,0:8:21.05:0,21,225	1/1:2,7:9:11.99:104,12,0	1/1:1,12:13:35.99:313,36,0	0/0:7,0:7:21.04:0,21,224	1/1:2,16:18:43.25:388,43,0	0/0:14,0:14:36.05:0,36,377	0/1:16,0:16:2.79:3,0,158	0/0:14,0:14:12.34:0,12,140	0/0:7,0:6:6:0,6,59	0/1:3,8:12:1.07:208,0,1	1/1:3,11:14:29.98:260,30,0	1/1:4,11:16:32.02:266,32,0	1/1:5,15:20:44.96:390,45,0	0/0:11,0:11:18.05:0,18,199	0/0:12,0:12:15.72:0,16,196	0/0:15,0:15:42.10:0,42,456
chr10	102221632	.	CA	C	326.31	PASS	AB=0.969;AC=12;AF=0.214;AN=56;BaseQRankSum=7.112;DP=410;FS=1.533;HRun=2;HaplotypeScore=62.5828;InbreedingCoeff=0.3412;MQ=80.20;MQ0=0;MQRankSum=-0.632;QD=3.33;ReadPosRankSum=4.520;VQSLOD=0.2834;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.10:0,60,702	0/0:5,0:5:15.04:0,15,191	0/0:14,0:16:20.51:0,21,320	0/1:16,0:14:21.66:22,0,170	0/0:16,0:16:29.73:0,30,405	0/0:11,0:11:6.06:0,6,53	0/0:24,0:24:11.98:0,12,159	1/1:10,1:11:17.91:161,18,0	1/1:12,0:12:1.69:23,2,0	0/0:14,0:14:39.08:0,39,448	0/0:16,0:16:45.08:0,45,489	0/0:13,0:13:33.54:0,34,391	0/0:8,0:8:21.05:0,21,262	1/1:7,0:7:0.57:2,1,0	0/0:14,0:14:7.75:0,8,53	0/0:9,0:9:27.06:0,27,324	0/0:23,0:23:9.91:0,10,138	0/0:16,0:16:45.11:0,45,554	0/1:12,2:14:33.59:113,0,34	0/1:12,0:12:6.47:6,0,17	0/1:8,0:7:10.15:42,0,10	0/0:16,0:16:11.97:0,12,171	0/0:15,0:15:7.29:0,7,118	0/0:17,0:17:12.48:0,12,139	0/0:22,0:22:5.41:0,5,147	0/0:17,0:17:48.08:0,48,517	1/1:16,2:18:1.51:96,2,0	0/0:18,0:18:48.10:0,48,585
chr10	102222161	.	ATG	A	6525.64	PASS	AB=0.875;AC=25;AF=0.446;AN=56;BaseQRankSum=8.055;DP=861;FS=0.675;HRun=0;HaplotypeScore=118.5165;InbreedingCoeff=0.8920;MQ=64.76;MQ0=9;MQRankSum=1.581;QD=18.91;ReadPosRankSum=3.898;VQSLOD=4.8154;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,134,1955	0/1:6,1:7:22.09:22,0,150	0/0:38,0:15:20.93:0,21,250	0/0:49,1:18:23.33:0,23,272	0/0:21,0:21:47.98:0,48,697	1/1:5,20:25:36.11:440,36,0	1/1:5,28:33:27.08:332,27,0	0/0:22,0:21:43.76:0,44,728	1/1:8,33:40:84.64:1016,85,0	0/0:30,0:30:77.43:0,77,1143	0/0:16,0:16:7.78:0,8,547	0/0:38,0:38:94.23:0,94,1489	0/0:29,1:30:43.55:0,44,1059	1/1:5,23:28:54.04:669,54,0	1/1:5,29:34:45.14:553,45,0	0/0:30,1:31:43.56:0,44,1162	1/1:10,25:35:54.16:649,54,0	0/0:32,0:32:57.62:0,58,817	0/0:34,0:33:41.32:0,41,1002	0/0:19,0:19:36.12:0,36,575	0/0:72,0:72:99:0,153,2320	1/1:3,17:20:21.54:262,22,0	1/1:1,18:20:41.86:494,42,0	1/1:7,32:40:55.83:702,56,0	1/1:4,23:27:45.11:558,45,0	1/1:5,22:28:71.73:791,72,0	0/0:25,0:25:52.98:0,53,795	1/1:2,5:7:3.01:37,3,0
chr10	102222178	.	C	CGT	2584.07	PASS	AB=0.745;AC=9;AF=0.161;AN=56;BaseQRankSum=-7.035;DP=902;FS=0.449;HRun=0;HaplotypeScore=142.7713;InbreedingCoeff=0.3488;MQ=58.48;MQ0=16;MQRankSum=-1.700;QD=9.83;ReadPosRankSum=-1.667;VQSLOD=3.2334;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:57:99:0,104,1376	0/0:6,0:6:9.03:0,9,105	0/1:46,0:11:21.17:21,0,34	0/0:58,0:18:10.78:0,11,63	0/0:16,0:18:4.95:0,5,250	0/0:21,0:24:45.01:0,45,452	0/0:38,0:39:47.55:0,48,498	0/1:18,11:30:2.03:378,0,2	0/0:45,0:44:81.33:0,81,1103	0/0:28,0:31:60.73:0,61,668	0/0:14,0:16:35.77:0,36,382	0/0:37,0:40:83.85:0,84,923	0/0:28,0:30:77.09:0,77,834	0/0:26,0:27:65.89:0,66,733	0/0:36,0:37:68.65:0,69,721	0/0:31,0:33:69.03:0,69,780	0/0:28,0:30:62.08:0,62,572	1/1:20,0:36:11.42:104,11,0	0/1:24,10:32:66.10:377,0,66	1/1:6,14:21:24.08:380,24,0	0/1:29,39:70:99:1003,0,158	0/0:22,0:22:17.82:0,18,302	0/0:23,0:24:25.85:0,26,482	0/0:34,0:39:60.37:0,60,674	0/0:27,0:28:54.15:0,54,615	0/0:28,0:29:39.38:0,39,581	0/1:9,15:24:62.21:470,0,62	0/0:6,0:6:5.85:0,6,48
chr10	102222844	.	T	TC	1279.54	PASS	AB=0.667;AC=29;AF=0.518;AN=56;BaseQRankSum=1.188;DP=272;FS=22.424;HRun=8;HaplotypeScore=37.9968;InbreedingCoeff=0.7759;MQ=79.87;MQ0=4;MQRankSum=-0.468;QD=10.40;ReadPosRankSum=-1.049;VQSLOD=0.2895;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:35.69:0,36,309	0/0:6,0:6:18.01:0,18,165	0/0:23,0:15:7.66:0,8,106	0/0:24,0:13:9.46:0,9,186	0/0:9,0:9:21.01:0,21,192	1/1:2,0:5:8.52:43,9,0	1/1:6,0:11:8.34:40,8,0	1/1:3,13:16:36.10:411,36,0	1/1:10,0:10:11.08:47,11,0	0/0:8,0:8:24:0,24,216	0/0:6,0:6:18:0,18,160	0/0:11,0:11:30.01:0,30,274	0/0:14,0:14:42.02:0,42,384	1/1:7,0:7:7.28:42,7,0	1/1:8,0:8:10.43:43,10,0	0/0:15,0:15:35.08:0,35,327	1/1:2,0:9:5.85:49,6,0	0/0:5,0:5:6.94:0,7,102	1/1:1,3:4:9.02:100,9,0	0/1:4,4:8:18.34:60,0,18	1/1:2,11:13:24.07:276,24,0	1/1:5,0:5:8.48:56,8,0	1/1:7,0:7:11.83:89,12,0	1/1:3,0:7:5.68:29,6,0	1/1:4,1:6:8.79:67,9,0	0/0:7,0:7:15.01:0,15,137	1/1:1,5:6:12.04:138,12,0	0/0:2,0:2:6:0,6,55
chr10	102222851	.	CCT	C	447.57	PASS	AB=0.940;AC=10;AF=0.179;AN=56;BaseQRankSum=3.885;DP=291;FS=3.319;HRun=0;HaplotypeScore=46.9085;InbreedingCoeff=-0.1306;MQ=75.48;MQ0=5;MQRankSum=0.386;QD=4.61;ReadPosRankSum=-3.678;VQSLOD=1.1718;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:43.18:0,43,583	0/0:6,0:6:18.06:0,18,310	0/1:29,0:13:24.99:25,0,196	0/0:31,0:16:34.23:0,34,466	0/0:10,0:10:29.90:0,30,420	0/0:5,0:5:11.97:0,12,99	0/1:12,0:12:36.23:36,0,79	0/0:18,0:18:20.57:0,21,324	0/1:8,1:8:9.08:65,0,9	0/0:10,0:10:26.12:0,26,401	0/0:6,0:6:18.06:0,18,288	0/0:11,0:11:30.07:0,30,452	0/0:15,0:15:45.12:0,45,699	0/1:7,0:7:4.92:141,0,5	0/1:5,6:11:99:121,0,116	0/0:16,0:16:45.13:0,45,732	0/0:10,0:10:11.89:0,12,90	0/0:5,0:5:14.72:0,15,200	0/1:4,0:4:5.47:5,0,30	0/0:7,0:7:9.01:0,9,108	0/0:12,0:12:15.01:0,15,187	0/1:5,1:6:12.90:83,0,13	0/1:8,0:8:52.23:96,0,52	0/0:8,0:8:11.97:0,12,100	0/1:5,0:5:8.37:8,0,67	0/0:7,0:7:20.99:0,21,263	0/1:6,0:6:3.17:3,0,57	0/0:2,0:2:6.02:0,6,84
chr10	102223869	.	G	GTATA	5938.93	PASS	AB=0.651;AC=6;AF=0.111;AN=54;BaseQRankSum=-10.919;DP=882;FS=0.847;HRun=0;HaplotypeScore=149.1165;InbreedingCoeff=0.2243;MQ=56.02;MQ0=27;MQRankSum=-0.691;QD=30.15;ReadPosRankSum=1.283;VQSLOD=5.0239;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:78.18:0,78,1262	0/0:12,0:12:33.11:0,33,564	0/0:18,0:8:3.47:0,3,26	./.	0/0:28,0:28:81.28:0,81,1394	0/0:33,0:33:67.56:0,68,1252	0/0:20,0:21:16.71:0,17,623	1/1:29,11:19:24.03:477,24,0	0/0:42,0:40:96.30:0,96,1621	0/0:35,0:34:93.32:0,93,1629	0/0:31,0:31:87.30:0,87,1510	0/0:39,0:39:99:0,111,1850	0/0:31,0:31:78.27:0,78,1361	0/0:26,0:26:60.19:0,60,1016	0/0:49,0:46:99:0,111,1913	0/0:29,0:29:72.22:0,72,1207	0/0:17,0:17:37.63:0,38,601	0/0:16,0:16:39.13:0,39,671	0/1:10,11:20:99:742,0,116	0/1:21,27:49:99:1373,0,472	0/1:17,19:34:99:1381,0,329	0/0:33,0:30:69.24:0,69,1185	0/0:34,0:34:84.71:0,85,1392	0/0:28,0:26:66.21:0,66,1122	0/0:28,0:28:63.29:0,63,1077	0/0:57,0:56:99:0,147,2399	0/1:24,24:49:99:1966,0,270	0/0:27,0:26:69.24:0,69,1209
chr10	102223955	.	GTGTGTGTATATA	G	2149.27	PASS	AB=0.769;AC=2;AF=0.038;AN=52;BaseQRankSum=7.536;DP=1111;FS=17.177;HRun=0;HaplotypeScore=318.9381;InbreedingCoeff=-0.0412;MQ=52.19;MQ0=67;MQRankSum=-6.781;QD=19.19;ReadPosRankSum=-0.153;VQSLOD=0.8525;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:33.72:0,34,2182	0/0:6,0:6:12.04:0,12,639	./.	./.	0/0:30,0:26:48.46:0,48,2047	0/0:53,0:50:99:0,117,5555	0/0:28,0:24:45.49:0,45,2090	0/0:77,0:36:39.07:0,39,934	0/0:37,0:33:72.23:0,72,3385	0/0:41,0:39:99:0,108,5326	0/0:21,0:18:39.59:0,40,1653	0/0:41,0:40:99:0,105,5014	0/0:30,0:28:75.24:0,75,3646	0/0:43,0:43:69.23:0,69,3196	0/0:48,0:42:69.22:0,69,3315	0/0:39,0:39:99:0,102,5159	0/0:30,0:28:48.16:0,48,2516	0/0:28,0:26:72.25:0,72,3773	0/0:36,0:29:78.25:0,78,3731	0/0:75,0:68:99:0,172,8782	0/0:45,0:39:92.18:0,92,4799	0/0:62,0:55:90.31:0,90,4086	0/0:38,0:34:56.96:0,57,2785	0/0:36,0:31:60.21:0,60,3282	0/0:37,0:30:53.99:0,54,2371	0/1:60,22:79:99:1517,0,5330	0/0:62,0:59:99:0,153,7515	0/1:20,10:25:99:720,0,1340
chr10	102223975	.	A	ATG	787.63	PASS	AB=0.844;AC=8;AF=0.154;AN=52;BaseQRankSum=-7.484;DP=959;FS=15.877;HRun=0;HaplotypeScore=135.8342;InbreedingCoeff=-0.1722;MQ=51.07;MQ0=71;MQRankSum=1.105;QD=2.61;ReadPosRankSum=-1.473;VQSLOD=1.0477;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:35.18:0,35,693	0/0:8,0:7:21.07:0,21,310	./.	./.	0/0:32,0:28:52.95:0,53,748	0/1:37,6:40:68.25:68,0,1266	0/1:22,0:17:4.22:4,0,525	0/1:53,1:7:8.84:9,0,147	0/0:26,3:26:17.27:0,17,947	0/0:44,0:41:99:0,120,1709	0/0:18,0:16:35.43:0,35,506	0/0:36,0:34:99:0,102,1402	0/0:27,0:25:75.24:0,75,1121	0/1:27,17:41:95.47:95,0,885	0/0:26,10:31:69.20:0,69,1007	0/0:35,0:35:96.27:0,96,1381	0/0:21,8:26:31.09:0,31,661	0/0:30,0:28:81.19:0,81,1151	0/0:30,0:25:66.19:0,66,951	0/0:75,1:67:99:0,138,2571	0/0:45,0:37:90.27:0,90,1333	0/1:36,12:41:99:272,0,796	0/1:28,6:29:99:116,0,654	0/1:22,7:26:99:162,0,712	0/1:17,11:20:99:189,0,386	0/0:63,0:59:99:0,101,1599	0/0:57,0:54:99:0,150,2171	0/0:24,0:19:50.63:0,51,539
chr10	102224090	.	T	TAC	6744.69	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=-15.186;DP=804;FS=6.589;HRun=0;HaplotypeScore=150.8256;InbreedingCoeff=0.9734;MQ=51.52;MQ0=6;MQRankSum=0.559;QD=41.38;ReadPosRankSum=-1.161;VQSLOD=5.5236;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:57.12:0,57,799	0/0:15,0:14:27.06:0,27,370	./.	0/0:16,0:6:5.76:0,6,65	0/0:35,0:31:51.11:0,51,729	0/0:33,0:32:84.27:0,84,1257	0/0:13,0:10:21.07:0,21,320	1/1:1,36:37:99:1915,108,0	0/0:28,0:27:63.18:0,63,903	0/0:58,0:55:99:0,162,2348	0/0:32,0:30:54.18:0,54,824	0/0:33,0:32:84.28:0,84,1275	0/0:33,0:30:72.24:0,72,1093	0/0:22,0:21:42.14:0,42,640	0/0:36,0:34:75.25:0,75,1141	0/0:36,0:36:96.30:0,96,1410	0/0:19,0:19:57.17:0,57,832	0/0:21,0:21:54.02:0,54,770	1/1:3,16:18:48.11:791,48,0	1/1:1,48:48:99:2072,108,0	1/1:4,19:22:51.17:984,51,0	0/0:43,0:41:81.23:0,81,1187	0/0:22,0:22:36.10:0,36,526	0/0:15,0:15:36.02:0,36,502	0/0:27,0:26:51.16:0,51,754	0/0:51,0:51:99:0,150,2146	1/1:1,31:27:51.17:983,51,0	0/0:23,0:23:66.17:0,66,998
chr10	102224208	.	TG	T	23002.03	PASS	AB=0.718;AC=54;AF=0.964;AN=56;BaseQRankSum=-4.776;DP=731;FS=1.119;HRun=2;HaplotypeScore=106.5010;InbreedingCoeff=-0.0284;MQ=48.60;MQ0=7;MQRankSum=-0.550;QD=31.47;ReadPosRankSum=3.762;VQSLOD=4.5378;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:23:63.20:815,63,0	1/1:0,11:11:30.10:389,30,0	0/1:10,10:11:0.77:211,0,1	0/1:21,9:20:99:176,0,185	1/1:0,26:25:69.22:894,69,0	1/1:0,23:19:57.19:738,57,0	1/1:0,20:16:48.16:623,48,0	1/1:2,33:32:90.24:1119,90,0	1/1:0,33:27:81.26:1049,81,0	1/1:0,48:45:99:1749,135,0	1/1:1,21:22:60.19:777,60,0	1/1:0,24:23:63.20:815,63,0	1/1:0,25:23:54.17:700,54,0	1/1:0,27:23:69.22:893,69,0	1/1:0,24:22:63.20:815,63,0	1/1:2,36:34:86.87:1100,87,0	1/1:2,12:13:36.12:466,36,0	1/1:0,18:17:48.16:623,48,0	1/1:2,13:14:42.12:528,42,0	1/1:0,32:32:93.30:1206,93,0	1/1:2,38:39:99:1362,105,0	1/1:0,42:39:99:1399,108,0	1/1:3,24:25:63.20:817,63,0	1/1:1,17:17:45.15:584,45,0	1/1:0,25:23:60.19:777,60,0	1/1:0,31:28:84.27:1090,84,0	1/1:0,29:26:69.22:895,69,0	1/1:0,10:10:30.10:389,30,0
chr10	102224263	.	C	CTGTG	1560.21	PASS	AB=1.000;AC=5;AF=0.096;AN=52;BaseQRankSum=-1.598;DP=587;FS=0.000;HRun=0;HaplotypeScore=178.2626;InbreedingCoeff=0.7316;MQ=37.55;MQ0=74;MQRankSum=-4.268;QD=26.44;ReadPosRankSum=0.667;VQSLOD=3.5376;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:16:0.12:0,0,270	0/0:8,0:7:21.07:0,21,351	./.	./.	0/0:21,0:18:24.05:0,24,392	0/0:19,0:12:0.84:0,1,36	0/0:26,0:18:23.71:0,24,265	0/0:29,0:28:71.83:0,72,693	0/0:32,0:29:50.30:0,50,341	0/0:35,0:33:96.05:0,96,1591	0/0:16,0:15:21.06:0,21,351	0/0:20,0:19:26.97:0,27,432	0/0:22,0:18:24.08:0,24,478	0/0:14,0:12:20.59:0,21,180	0/0:19,0:19:31.84:0,32,243	0/0:23,0:23:45.52:0,46,771	0/0:16,0:11:17.80:0,18,172	0/0:13,0:11:21.06:0,21,362	0/0:10,0:9:26.93:0,27,264	0/0:27,0:26:54.75:0,55,457	0/0:32,0:24:36.96:0,37,462	0/0:32,0:28:34.90:0,35,285	0/0:16,0:14:8.77:0,9,84	0/0:17,0:16:14.89:0,15,142	0/0:17,0:14:25.61:0,26,156	1/1:10,18:25:60.10:1325,60,0	0/0:14,0:8:11.81:0,12,108	1/1:5,5:11:16.45:352,16,0
chr10	102224265	.	C	CTG	4942.19	PASS	AB=0.698;AC=31;AF=0.596;AN=52;BaseQRankSum=-0.039;DP=572;FS=7.609;HRun=0;HaplotypeScore=145.8833;InbreedingCoeff=0.6416;MQ=36.93;MQ0=76;MQRankSum=-3.740;QD=14.12;ReadPosRankSum=-0.386;VQSLOD=4.4312;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:15:12.03:0,12,148	0/0:8,0:7:8.99:0,9,95	./.	./.	0/0:21,0:18:15:0,15,167	1/1:8,11:12:5.01:96,5,0	1/1:15,10:17:9.03:146,9,0	1/1:11,16:26:49.47:678,49,0	1/1:11,18:26:45.14:694,45,0	0/0:34,0:32:66.11:0,66,781	0/0:15,0:14:12.02:0,12,148	0/0:21,0:20:17.73:0,18,195	0/0:21,0:18:24.55:0,25,295	1/1:7,7:12:9.03:146,9,0	1/1:9,10:19:24.08:390,24,0	0/0:21,0:21:26.43:0,26,331	1/1:7,9:11:9.02:111,9,0	0/0:12,0:10:2.81:0,3,135	0/1:5,4:8:15.81:272,0,16	1/1:13,15:25:39.07:630,39,0	1/1:16,14:23:12:174,12,0	0/1:16,15:27:9.81:363,0,10	1/1:5,9:12:6:98,6,0	0/1:10,6:15:24.86:135,0,25	1/1:9,10:15:16.99:285,17,0	1/1:27,0:24:56.85:477,57,0	1/1:7,6:7:8.96:116,9,0	1/1:13,0:11:15:132,15,0
chr10	102225013	.	C	CTGTG	1400.09	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=-4.190;DP=472;FS=2.192;HRun=0;HaplotypeScore=148.5171;InbreedingCoeff=0.7796;MQ=31.11;MQ0=60;MQRankSum=-2.864;QD=50.00;ReadPosRankSum=-0.034;VQSLOD=4.5346;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:17:12.04:0,12,239	0/0:5,0:5:9.03:0,9,179	./.	./.	0/0:18,0:16:15.03:0,15,291	0/0:12,0:11:20.05:0,20,146	0/0:15,0:13:14.33:0,14,129	0/0:22,0:21:56.32:0,56,489	0/0:22,0:21:34.27:0,34,183	0/0:19,0:16:48.16:0,48,904	0/0:17,0:11:11.94:0,12,233	0/0:19,0:16:24.08:0,24,454	0/0:25,0:19:36.01:0,36,693	0/0:24,0:19:28.23:0,28,150	0/0:18,0:15:19.31:0,19,98	0/0:16,0:13:27.09:0,27,531	0/0:13,0:12:20.05:0,20,108	0/0:10,0:6:12.04:0,12,239	0/0:13,0:11:32.65:0,33,256	0/0:20,0:19:31.35:0,31,164	0/0:33,0:26:15.91:0,16,145	0/0:17,0:15:22.61:0,23,116	0/0:13,0:10:17.21:0,17,123	0/0:13,0:9:14.27:0,14,83	0/0:11,0:10:15.29:0,15,83	1/1:2,20:20:60.18:1434,60,0	0/0:13,0:13:23.13:0,23,137	1/1:0,5:4:3.01:74,3,0
chr10	102225015	.	C	CTG	5979.40	PASS	AB=0.590;AC=31;AF=0.596;AN=52;BaseQRankSum=-0.235;DP=490;FS=1.321;HRun=0;HaplotypeScore=127.5091;InbreedingCoeff=0.7140;MQ=31.63;MQ0=61;MQRankSum=-2.298;QD=19.67;ReadPosRankSum=1.384;VQSLOD=5.3551;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:17:12.02:0,12,148	0/0:5,0:5:9.03:0,9,111	./.	./.	0/0:18,0:16:15:0,15,168	0/1:1,11:11:15.81:272,0,16	1/1:5,13:16:9:147,9,0	0/1:10,14:23:3.99:605,0,4	1/1:4,19:23:36.12:584,36,0	0/0:19,0:16:39.12:0,39,480	0/0:17,0:11:11.99:0,12,130	0/0:20,0:17:27.07:0,27,316	0/0:24,0:19:37.05:0,37,442	1/1:6,18:19:30.10:487,30,0	1/1:4,15:16:21.06:341,21,0	0/0:16,0:13:29.88:0,30,333	1/1:4,9:12:18.06:292,18,0	0/0:10,0:6:12.04:0,12,148	1/1:6,7:11:21.07:342,21,0	1/1:6,14:19:33.11:537,33,0	0/1:14,23:29:18.76:267,0,19	1/1:4,14:16:24.08:391,24,0	1/1:4,10:11:15.05:244,15,0	1/1:0,13:10:14.88:244,15,0	1/1:4,7:10:14.96:242,15,0	1/1:24,0:21:62.97:568,63,0	1/1:0,14:14:24.08:390,24,0	1/1:5,0:4:3:26,3,0
chr10	102227309	.	TATAG	T	3954.93	PASS	AB=0.877;AC=29;AF=0.558;AN=52;BaseQRankSum=9.712;DP=654;FS=17.823;HRun=0;HaplotypeScore=124.3659;InbreedingCoeff=0.3889;MQ=69.48;MQ0=4;MQRankSum=1.724;QD=9.33;ReadPosRankSum=0.381;VQSLOD=1.7281;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:33:0:0,0,0	0/0:3,0:7:6.02:0,6,105	./.	./.	0/0:39,0:39:60.21:0,60,1367	1/1:14,9:24:21.54:304,22,0	1/1:9,9:18:15.05:229,15,0	0/1:38,0:36:0:0,0,0	1/1:8,3:11:9.03:137,9,0	0/0:34,0:35:42.14:0,42,937	0/0:21,0:21:26.66:0,27,522	0/1:20,6:26:99:153,0,344	0/0:27,0:27:33.10:0,33,695	0/1:14,14:28:51.76:211,0,52	1/1:14,14:28:30.10:458,30,0	0/0:25,0:25:33.11:0,33,767	0/1:22,1:23:15.32:15,0,511	0/1:18,1:19:15.69:16,0,540	1/1:15,5:18:15.05:229,15,0	1/1:15,10:25:24.08:366,24,0	0/1:14,7:21:22.48:296,0,22	1/1:7,3:11:3.01:46,3,0	1/1:12,7:19:15.05:229,15,0	1/1:12,7:19:18.06:275,18,0	1/1:10,19:28:30.10:458,30,0	0/1:31,0:30:39.15:167,0,39	1/1:23,11:34:24.08:366,24,0	0/0:8,0:8:0.47:0,0,1
chr10	102227576	.	GAT	G	462.25	PASS	AB=0.980;AC=12;AF=0.214;AN=56;BaseQRankSum=-2.350;DP=493;FS=8.966;HRun=0;HaplotypeScore=99.1269;InbreedingCoeff=-0.0888;MQ=83.31;MQ0=10;MQRankSum=2.777;QD=2.63;ReadPosRankSum=-0.908;VQSLOD=1.1630;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:10.56:0,11,303	0/0:6,0:6:12.04:0,12,189	0/0:27,0:13:9.83:0,10,137	0/0:58,1:30:19.89:0,20,191	0/0:26,0:26:47.23:0,47,745	0/0:20,0:19:23.16:0,23,129	0/1:8,0:7:48.37:50,0,48	0/1:31,0:30:48.13:311,0,48	0/0:11,0:11:11.08:0,11,53	0/0:18,0:18:48.16:0,48,751	0/0:16,0:16:33.08:0,33,474	0/0:11,0:11:12.04:0,12,190	0/1:9,1:10:15.87:16,0,262	0/0:10,1:10:11.61:0,12,65	0/1:17,1:17:10.90:11,0,100	0/0:7,1:7:21.06:0,21,314	0/1:17,0:17:47.27:47,0,47	0/0:22,0:22:18.85:0,19,220	0/1:11,0:11:27.02:72,0,27	0/1:29,0:29:1.34:1,0,126	1/1:5,1:6:6.01:62,6,0	0/0:6,0:5:2.71:0,3,16	0/0:15,0:14:14.98:0,15,82	0/1:8,0:8:22.62:23,0,37	0/1:21,0:20:6.98:7,0,95	0/1:16,1:15:4.91:5,0,316	0/0:25,0:25:46.14:0,46,308	0/0:22,0:22:33.15:0,33,363
chr10	102227590	.	T	TAG	6272.56	PASS	AB=0.764;AC=30;AF=0.536;AN=56;BaseQRankSum=-6.996;DP=508;FS=1.429;HRun=0;HaplotypeScore=87.8922;InbreedingCoeff=0.5619;MQ=82.97;MQ0=11;MQRankSum=0.172;QD=20.57;ReadPosRankSum=1.140;VQSLOD=5.2720;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:14:16.48:0,16,330	0/0:5,0:5:15.02:0,15,202	0/0:34,0:16:12.73:0,13,166	0/0:60,0:28:17.01:0,17,204	0/0:23,0:24:71.76:0,72,860	1/1:0,23:22:24.07:462,24,0	0/1:2,5:6:0.35:215,0,0	1/1:3,35:38:77.17:896,77,0	1/1:1,10:11:12.04:231,12,0	0/0:21,0:21:63.16:0,63,843	0/0:15,0:15:39.07:0,39,504	0/0:10,0:10:15.04:0,15,206	0/0:9,0:9:23.86:0,24,309	1/1:1,9:9:12.04:231,12,0	1/1:3,17:19:27.06:484,27,0	0/0:9,0:8:24.05:0,24,323	1/1:4,20:23:13.83:356,14,0	0/1:20,1:21:63.74:112,0,64	1/1:1,6:7:21.06:329,21,0	1/1:6,22:28:50.84:838,51,0	1/1:6,1:7:9:87,9,0	1/1:1,4:5:6.01:83,6,0	1/1:1,15:15:14.77:289,15,0	1/1:1,5:6:12.04:228,12,0	0/1:3,16:19:12.93:455,0,13	0/1:18,0:16:77.15:182,0,77	0/1:5,20:25:8.94:745,0,9	0/1:17,0:17:50.89:51,0,196
chr10	102227612	.	TGATA	T	2692.69	PASS	AB=0.743;AC=24;AF=0.462;AN=52;BaseQRankSum=4.398;DP=473;FS=2.007;HRun=0;HaplotypeScore=101.1917;InbreedingCoeff=0.7138;MQ=60.68;MQ0=14;MQRankSum=-0.435;QD=12.30;ReadPosRankSum=-0.098;VQSLOD=2.6731;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:22.58:0,23,297	0/0:9,0:9:24.08:0,24,559	./.	./.	0/0:22,0:22:39.13:0,39,865	0/0:24,0:23:12.04:0,12,274	0/0:11,0:12:14.59:0,15,416	1/1:37,0:35:2.97:20,3,0	0/0:10,0:10:15.05:0,15,338	0/0:21,0:21:33.11:0,33,757	0/0:13,0:13:21.07:0,21,470	1/1:2,7:9:6.02:93,6,0	0/1:4,9:13:2.67:257,0,3	0/0:11,0:11:9.03:0,9,211	0/0:23,0:23:30.06:0,30,639	1/1:4,4:8:12.04:185,12,0	0/0:24,0:26:15.21:0,15,542	0/1:13,2:17:28.69:130,0,29	1/1:7,3:9:15.05:231,15,0	1/1:24,5:29:32.94:505,33,0	1/1:1,7:8:9.03:139,9,0	1/1:5,2:6:3.01:46,3,0	0/0:18,0:17:9.03:0,9,211	0/0:7,0:7:6.02:0,6,138	1/1:14,7:21:29.93:456,30,0	1/1:7,4:17:17.83:253,18,0	1/1:15,6:21:15.05:231,15,0	1/1:4,2:17:3.07:339,3,0
chr10	102227707	.	T	TCATA	1950.75	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.690;DP=559;FS=1.562;HRun=0;HaplotypeScore=89.8748;InbreedingCoeff=0.9941;MQ=62.30;MQ0=0;MQRankSum=-0.613;QD=52.72;ReadPosRankSum=1.236;VQSLOD=4.8006;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:29.46:0,29,390	0/0:9,0:9:24.06:0,24,357	0/0:21,0:18:32.40:0,32,458	0/0:14,0:13:27.08:0,27,398	0/0:24,0:24:63.09:0,63,914	0/0:24,0:24:60.14:0,60,919	0/0:15,0:15:36.11:0,36,580	0/0:39,0:39:87.25:0,87,1351	0/0:14,0:14:30.10:0,30,499	0/0:25,0:25:63.20:0,63,1028	0/0:22,0:22:63.22:0,63,1070	0/0:16,0:16:45.14:0,45,737	0/0:16,0:16:33.08:0,33,510	0/0:23,0:23:57.18:0,57,940	0/0:25,0:25:66.23:0,66,1117	0/0:15,0:15:42.13:0,42,685	0/0:14,0:14:30.10:0,30,512	0/0:9,0:9:24.08:0,24,385	0/0:15,0:15:42.13:0,42,688	0/0:34,0:34:93.32:0,93,1561	0/0:19,0:19:51.14:0,51,805	0/0:9,0:9:24.06:0,24,382	0/0:15,0:15:45.11:0,45,732	0/0:20,0:20:48.12:0,48,756	0/0:31,0:31:84.27:0,84,1402	1/1:3,20:25:63.20:1471,63,0	0/0:31,0:31:84.23:0,84,1395	1/1:1,10:12:24.08:601,24,0
chr10	102229761	.	TCA	T	4093.46	PASS	AB=0.838;AC=33;AF=0.589;AN=56;BaseQRankSum=4.127;DP=558;FS=2.710;HRun=0;HaplotypeScore=76.8828;InbreedingCoeff=0.5389;MQ=56.27;MQ0=12;MQRankSum=0.996;QD=11.34;ReadPosRankSum=1.096;VQSLOD=3.4070;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:45.02:0,45,556	0/1:7,1:8:24.49:24,0,82	0/0:42,0:21:3.01:0,3,45	0/0:34,0:13:0:0,0,0	0/0:17,0:17:28.99:0,29,380	1/1:8,7:15:12.03:134,12,0	0/1:19,10:30:56.70:230,0,57	1/1:20,6:26:15:153,15,0	1/1:8,13:21:24.07:266,24,0	0/0:22,0:22:30.09:0,30,432	0/1:10,1:11:18.81:19,0,106	1/1:7,7:15:11.87:115,12,0	0/0:10,0:10:9.01:0,9,114	1/1:5,14:20:38.94:415,39,0	1/1:12,10:23:38.73:376,39,0	0/0:17,0:17:32.47:0,32,464	1/1:3,20:25:37.45:606,37,0	0/0:8,0:16:14.96:0,15,125	1/1:8,5:13:15.02:157,15,0	1/1:5,7:12:18.01:187,18,0	1/1:16,14:29:17.84:200,18,0	1/1:9,7:16:17.98:185,18,0	1/1:7,0:7:2.97:21,3,0	1/1:5,23:29:50.98:549,51,0	1/1:4,16:19:21.06:235,21,0	0/1:15,1:16:3.98:4,0,210	0/1:13,7:21:18.53:219,0,19	0/0:7,0:6:8.95:0,9,70
chr10	102230904	.	CG	C	954.36	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.910;DP=694;FS=6.091;HRun=1;HaplotypeScore=68.8168;InbreedingCoeff=0.9054;MQ=83.81;MQ0=0;MQRankSum=-2.347;QD=32.91;ReadPosRankSum=0.892;VQSLOD=3.1440;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,162,2480	0/0:13,0:13:39.11:0,39,596	0/0:32,0:32:92.94:0,93,1288	0/0:26,0:26:72.17:0,72,1062	0/0:19,0:19:51.14:0,51,762	0/0:20,0:20:60.09:0,60,851	0/0:31,0:31:93.30:0,93,1460	0/0:28,0:28:81.26:0,81,1249	0/0:27,0:28:81.28:0,81,1278	0/0:30,0:30:87.25:0,87,1337	0/0:12,0:12:33.11:0,33,521	0/0:30,0:30:90.23:0,90,1359	0/0:29,0:29:87.23:0,87,1333	0/0:22,0:22:66.21:0,66,1027	0/0:22,0:22:66.20:0,66,1005	0/0:21,0:21:63.21:0,63,1004	0/0:32,0:32:93.27:0,93,1445	0/0:15,0:15:45.15:0,45,713	0/0:20,0:20:59.98:0,60,788	0/0:21,0:21:63.20:0,63,973	0/0:30,0:30:87.22:0,87,1321	0/0:21,0:21:63.18:0,63,978	0/0:15,0:15:45.10:0,45,667	0/0:32,0:32:96.33:0,96,1527	0/0:25,0:25:75.26:0,75,1193	1/1:1,16:17:3.20:606,3,0	0/0:35,0:35:99:0,105,1647	1/1:0,12:12:33.11:458,33,0
chr10	102231486	.	AGTGTGT	A	4047.10	PASS	AB=1.000;AC=19;AF=0.352;AN=54;BaseQRankSum=-0.752;DP=471;FS=7.578;HRun=0;HaplotypeScore=99.7876;InbreedingCoeff=0.8247;MQ=69.65;MQ0=7;MQRankSum=-1.459;QD=23.53;ReadPosRankSum=1.751;VQSLOD=2.8333;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:39.10:0,39,736	0/0:7,0:7:21.05:0,21,472	0/0:22,0:15:44.68:0,45,630	0/0:25,0:14:29.98:0,30,399	0/0:16,0:16:45.14:0,45,716	1/1:8,0:8:21.07:327,21,0	1/1:21,0:21:51.11:755,51,0	0/0:15,0:15:36.09:0,36,520	1/1:13,2:15:36.10:564,36,0	0/0:20,0:19:45.09:0,45,840	0/0:9,0:9:18.02:0,18,283	0/0:17,0:17:48.15:0,48,887	0/0:14,0:14:36.08:0,36,641	1/1:16,1:17:44.98:644,45,0	1/1:20,1:21:57.18:928,57,0	0/0:16,0:16:36.12:0,36,766	1/1:22,1:23:6.02:98,6,0	0/0:26,0:25:60.84:0,61,1461	0/0:21,0:21:41.84:0,42,703	0/0:17,0:16:24.07:0,24,414	0/0:27,0:26:63.20:0,63,1005	./.	1/1:0,12:12:2.66:34,3,0	1/1:28,0:28:9.26:85,9,0	1/1:14,0:14:36.09:544,36,0	0/0:13,0:13:0.65:0,1,24	0/0:5,0:5:15.05:0,15,234	0/1:13,0:13:14.59:68,0,15
chr10	102231489	.	GTGTGTGTGTA	G	2109.18	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=7.619;DP=487;FS=27.207;HRun=0;HaplotypeScore=135.9409;InbreedingCoeff=0.8965;MQ=67.52;MQ0=9;MQRankSum=-1.543;QD=13.79;ReadPosRankSum=2.191;VQSLOD=0.7943;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:38.23:0,38,778	0/0:8,0:8:24.03:0,24,669	0/0:22,0:15:7.30:0,7,223	0/0:24,0:13:11.16:0,11,132	0/0:17,0:17:41.90:0,42,453	1/1:8,0:8:11.34:131,11,0	1/1:20,0:20:35.68:311,36,0	0/0:15,0:14:23.98:0,24,208	1/1:15,0:15:32.96:298,33,0	0/0:20,0:19:36.03:0,36,706	0/0:12,0:12:14.98:0,15,340	0/0:18,0:18:45.01:0,45,755	0/0:15,0:15:23.87:0,24,548	1/1:17,0:17:41.88:348,42,0	1/1:21,0:21:44.12:426,44,0	0/0:15,0:15:36.01:0,36,694	1/1:24,0:24:4.64:53,5,0	0/0:29,0:27:50.50:0,51,1401	0/0:20,0:19:12.58:0,13,494	0/0:16,0:15:21.47:0,21,331	0/0:31,0:30:65.60:0,66,916	./.	1/1:12,0:12:2.24:16,2,0	0/0:32,0:32:8.16:0,8,88	1/1:12,0:12:29.97:252,30,0	1/1:11,0:11:29.99:265,30,0	0/0:6,0:6:18.03:0,18,329	1/1:2,11:13:8.71:212,9,0
chr10	102231491	.	G	GTA	1772.85	PASS	AB=0.524;AC=17;AF=0.315;AN=54;BaseQRankSum=7.342;DP=487;FS=6.411;HRun=0;HaplotypeScore=83.1535;InbreedingCoeff=0.8785;MQ=66.63;MQ0=9;MQRankSum=0.259;QD=10.94;ReadPosRankSum=2.083;VQSLOD=2.9327;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:42.08:0,42,571	0/0:8,0:8:24.02:0,24,294	0/0:22,0:15:44.93:0,45,600	0/0:23,0:12:30.04:0,30,378	0/0:17,0:17:45.14:0,45,662	1/1:8,0:8:20.83:158,21,0	1/1:21,0:21:46.43:405,46,0	0/0:14,0:13:36.09:0,36,474	1/1:15,0:15:30.44:221,30,0	0/0:20,0:19:47.97:0,48,597	0/0:11,0:11:20.70:0,21,240	0/0:17,0:17:48.15:0,48,709	0/0:15,0:15:38.30:0,38,509	1/1:17,0:17:31.34:312,31,0	1/1:21,0:21:55.74:450,56,0	0/0:15,0:15:36.12:0,36,548	0/1:2,20:22:8.70:45,0,9	0/0:30,0:28:31.40:0,31,861	0/0:18,0:17:50.45:0,50,630	0/0:17,0:16:23.79:0,24,343	0/0:33,0:32:72.14:0,72,1022	./.	1/1:13,0:13:2.90:17,3,0	1/1:33,0:33:10.81:68,11,0	1/1:12,0:12:35.92:294,36,0	0/0:11,0:11:32.95:0,33,283	0/0:7,0:7:16.56:0,17,207	0/0:13,0:13:11.84:0,12,81
chr10	102231495	.	GTGTA	G	2570.16	PASS	AB=0.906;AC=27;AF=0.482;AN=56;BaseQRankSum=8.026;DP=502;FS=1.395;HRun=0;HaplotypeScore=93.8330;InbreedingCoeff=0.5430;MQ=60.96;MQ0=9;MQRankSum=-1.154;QD=8.89;ReadPosRankSum=-1.727;VQSLOD=2.1888;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:29.69:0,30,411	0/0:8,0:8:23.94:0,24,326	0/0:21,0:14:7.30:0,7,223	0/0:19,0:8:11.16:0,11,132	0/0:17,0:17:41.87:0,42,332	1/1:11,0:11:26.31:199,26,0	1/1:20,0:20:41.10:338,41,0	0/0:12,0:11:26.35:0,26,216	1/1:19,0:19:35.93:308,36,0	0/1:17,0:16:13.36:13,0,378	0/1:10,0:10:5.70:6,0,133	0/0:16,0:16:44.96:0,45,431	0/0:14,0:14:17.91:0,18,261	1/1:19,0:19:44.68:355,45,0	1/1:26,0:26:68.58:549,69,0	0/0:15,0:15:38.96:0,39,409	1/1:22,0:22:4.95:45,5,0	0/0:31,0:29:25.54:0,26,695	0/0:18,0:17:7.92:0,8,266	0/0:18,0:17:0.42:0,0,135	0/1:35,0:34:77.03:77,0,387	1/1:12,0:12:4.90:18,5,0	1/1:14,0:14:5.45:40,5,0	0/1:4,32:36:19.20:99,0,19	1/1:17,0:17:35.96:301,36,0	1/1:12,0:12:35.99:317,36,0	0/1:7,0:7:14.22:14,0,93	1/1:12,0:12:9.01:93,9,0
chr10	102231497	.	GTA	G	2594.10	PASS	AB=0.964;AC=28;AF=0.500;AN=56;BaseQRankSum=8.678;DP=513;FS=9.507;HRun=0;HaplotypeScore=82.2393;InbreedingCoeff=0.4872;MQ=58.51;MQ0=11;MQRankSum=-1.256;QD=8.24;ReadPosRankSum=-2.825;VQSLOD=1.9173;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:14.71:0,15,282	0/0:8,0:8:23.85:0,24,219	0/0:19,0:12:7.30:0,7,223	0/0:19,0:8:11.16:0,11,132	0/0:17,0:17:41.87:0,42,332	1/1:12,0:12:26.29:200,26,0	1/1:22,0:22:43.35:337,43,0	0/0:14,0:13:32.74:0,33,239	1/1:20,0:20:38.83:303,39,0	0/1:17,0:16:13.45:13,0,276	0/1:9,0:9:10.56:11,0,108	0/0:16,0:16:44.94:0,45,379	0/0:14,0:14:17.10:0,17,216	1/1:19,0:19:44.64:342,45,0	1/1:26,0:26:68.54:536,69,0	0/0:16,0:16:38.95:0,39,353	1/1:23,0:23:10.73:58,11,0	0/0:32,0:29:8.63:0,9,399	0/1:13,5:17:42.14:42,0,211	0/0:18,0:17:0.41:0,0,135	0/1:35,0:34:70.01:70,0,365	1/1:14,0:13:7.89:41,8,0	1/1:15,0:15:8.58:64,9,0	0/1:37,0:37:33.48:33,0,34	1/1:16,0:16:38.96:326,39,0	1/1:13,0:13:38.99:342,39,0	0/1:7,0:7:14.29:14,0,91	1/1:12,0:12:8.81:65,9,0
chr10	102231499	.	ATG	A	713.63	PASS	AB=0.988;AC=25;AF=0.481;AN=52;BaseQRankSum=2.214;DP=533;FS=0.000;HRun=0;HaplotypeScore=91.4994;InbreedingCoeff=0.2569;MQ=56.55;MQ0=12;MQRankSum=-1.037;QD=2.27;ReadPosRankSum=0.155;VQSLOD=1.4925;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:17.92:18,0,78	0/0:8,0:8:12.04:0,12,170	./.	./.	0/0:18,0:18:2.99:0,3,24	1/1:11,0:12:7.73:52,8,0	1/1:23,0:23:8.86:69,9,0	0/0:14,0:13:0.47:0,0,1	1/1:17,2:19:11.05:89,11,0	0/0:17,0:19:8.48:0,8,54	0/1:10,0:10:31.45:35,0,31	0/0:16,0:16:3.01:0,3,44	0/0:14,0:14:2.98:0,3,22	1/1:18,1:19:6.01:59,6,0	1/1:25,1:26:17.85:153,18,0	0/0:16,0:16:6.02:0,6,85	1/1:22,1:23:6.76:63,7,0	0/1:30,1:28:2.66:3,0,206	0/1:19,0:18:5.55:55,0,6	1/1:11,0:16:5.04:38,5,0	1/1:35,0:33:16.13:83,16,0	1/1:15,0:14:6.90:66,7,0	0/0:16,0:16:0.34:0,0,1	0/0:42,0:42:5.58:0,6,174	0/1:16,1:17:11.26:34,0,11	0/0:18,0:18:8.13:0,8,56	0/1:8,0:8:5.20:37,0,5	0/1:13,0:13:15.46:18,0,15
chr10	102232949	.	T	TA	7325.38	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=18.666;DP=663;FS=3.224;HRun=1;HaplotypeScore=173.2183;InbreedingCoeff=0.9990;MQ=69.90;MQ0=0;MQRankSum=-17.312;QD=38.35;ReadPosRankSum=3.946;VQSLOD=4.3846;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.24:0,90,1134	0/0:18,0:18:48.16:0,48,623	0/0:28,0:28:74.79:0,75,913	0/0:34,0:33:93.24:0,93,1152	0/0:25,0:25:75.24:0,75,966	1/1:8,12:19:57.19:832,57,0	1/1:4,6:10:30.10:413,30,0	0/0:30,0:30:87.28:0,87,1129	1/1:5,13:17:42.11:573,42,0	0/0:33,0:33:96.31:0,96,1236	0/0:22,0:22:66.20:0,66,842	0/0:27,0:27:81.26:0,81,1051	0/0:22,0:22:66.21:0,66,855	1/1:7,19:26:78.25:1065,78,0	1/1:6,14:20:57.18:782,57,0	0/0:28,0:28:84.27:0,84,1090	1/1:3,6:9:24.08:338,24,0	0/0:16,0:16:48.11:0,48,603	0/0:24,0:24:66.21:0,66,857	0/0:38,0:38:99:0,105,1362	0/0:29,0:29:84.27:0,84,1091	1/1:7,20:27:78.26:1125,78,0	1/1:5,13:18:42.14:592,42,0	1/1:5,14:19:42.14:581,42,0	1/1:3,21:24:72.24:1024,72,0	0/0:32,0:32:93.29:0,93,1183	0/0:28,0:28:81.26:0,81,1052	0/0:8,0:8:21.07:0,21,273
chr10	102232950	.	AG	A	2783.01	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=17.796;DP=622;FS=8.308;HRun=1;HaplotypeScore=165.9546;InbreedingCoeff=0.9978;MQ=71.62;MQ0=0;MQRankSum=-15.968;QD=18.80;ReadPosRankSum=6.362;VQSLOD=3.3488;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.24:0,93,1409	0/0:18,0:18:51.15:0,51,790	0/0:27,0:27:77.76:0,78,1206	0/0:35,0:34:96.15:0,96,1409	0/0:25,0:25:75.26:0,75,1199	1/1:13,0:12:38.70:288,39,0	1/1:7,0:7:20.81:149,21,0	0/0:30,0:30:90.30:0,90,1410	1/1:12,1:13:32.51:252,33,0	0/0:32,0:32:96.32:0,96,1515	0/0:23,0:23:69.20:0,69,1055	0/0:27,0:27:81.28:0,81,1288	0/0:22,0:22:66.23:0,66,1055	1/1:22,0:23:65.43:494,65,0	1/1:15,0:15:44.58:313,45,0	0/0:28,0:28:84.29:0,84,1335	1/1:6,0:6:17.83:123,18,0	0/0:16,0:16:48.16:0,48,758	0/0:24,0:24:72.25:0,72,1140	0/0:38,0:38:99:0,111,1760	0/0:30,0:30:87.28:0,87,1368	1/1:21,0:21:59.31:419,59,0	1/1:11,0:11:32.59:235,33,0	1/1:14,3:17:35.64:275,36,0	1/1:22,0:22:65.12:456,65,0	0/0:31,0:31:93.31:0,93,1466	0/0:28,0:28:84.29:0,84,1339	0/0:9,0:9:27.06:0,27,400
chr10	102232952	.	T	TTATAAG	9893.67	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=17.531;DP=616;FS=10.038;HRun=0;HaplotypeScore=199.9289;InbreedingCoeff=0.9973;MQ=71.12;MQ0=0;MQRankSum=-16.304;QD=69.19;ReadPosRankSum=6.258;VQSLOD=4.5214;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.30:0,87,2166	0/0:18,0:18:51.17:0,51,1274	0/0:29,0:29:78.25:0,78,1853	0/0:34,0:33:84.22:0,84,1864	0/0:26,0:26:78.25:0,78,1864	1/1:9,4:12:39.13:894,39,0	1/1:4,2:6:18.06:443,18,0	0/0:30,0:30:87.28:0,87,2019	1/1:8,4:12:33.06:788,33,0	0/0:33,0:33:99:0,99,2391	0/0:22,0:22:66.23:0,66,1634	0/0:27,0:27:78.25:0,78,1919	0/0:23,0:23:66.23:0,66,1675	1/1:10,11:22:66.23:1711,66,0	1/1:3,11:14:42.14:1259,42,0	0/0:28,0:28:84.27:0,84,2101	1/1:3,3:6:18.06:465,18,0	0/0:15,0:15:45.15:0,45,1072	0/0:24,0:24:72.25:0,72,1753	0/0:36,0:36:99:0,108,2673	0/0:31,0:31:90.29:0,90,2163	1/1:15,5:20:60.21:1289,60,0	1/1:10,1:11:33.11:681,33,0	1/1:10,7:17:38.99:897,39,0	1/1:17,5:22:66.23:1468,66,0	0/0:30,0:30:90.31:0,90,2212	0/0:28,0:28:84.29:0,84,2065	0/0:9,0:9:27.09:0,27,608
chr10	102232956	.	A	AT	2334.63	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=17.386;DP=617;FS=5.628;HRun=2;HaplotypeScore=169.7430;InbreedingCoeff=0.9764;MQ=70.58;MQ0=0;MQRankSum=-16.893;QD=16.33;ReadPosRankSum=7.121;VQSLOD=3.5311;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.31:0,93,1299	0/0:19,0:19:51.17:0,51,713	0/0:32,0:32:84.24:0,84,1081	0/0:31,0:30:87.25:0,87,1142	0/0:26,0:26:75.23:0,75,1017	1/1:13,4:16:20.92:237,21,0	1/1:4,2:6:16.33:113,16,0	0/0:26,0:26:78.26:0,78,1089	1/1:6,4:10:20.20:188,20,0	0/0:34,0:34:99:0,99,1383	0/0:22,0:22:63.21:0,63,881	0/0:30,0:30:87.26:0,87,1164	0/0:23,0:23:69.23:0,69,962	1/1:8,12:20:55.12:505,55,0	1/1:3,11:14:40.01:432,40,0	0/0:28,0:28:84.28:0,84,1175	1/1:3,3:6:15.60:131,16,0	0/0:14,0:14:42.14:0,42,586	0/0:24,0:24:72.23:0,72,989	0/0:36,0:36:99:0,108,1493	0/0:31,0:31:90.29:0,90,1241	1/1:15,5:20:51.92:311,52,0	1/1:11,1:12:5.22:91,5,0	1/1:8,7:15:29.17:232,29,0	1/1:18,5:23:36.41:311,36,0	0/0:30,0:30:87.28:0,87,1188	0/0:28,0:28:81.26:0,81,1118	0/0:9,0:9:27.09:0,27,378
chr10	102232957	.	A	AGG	5939.80	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=17.314;DP=617;FS=6.267;HRun=0;HaplotypeScore=169.6448;InbreedingCoeff=0.9972;MQ=70.57;MQ0=0;MQRankSum=-16.695;QD=42.13;ReadPosRankSum=6.417;VQSLOD=5.4474;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.30:0,93,1489	0/0:19,0:19:54.17:0,54,855	0/0:32,0:32:87.11:0,87,1339	0/0:31,0:30:87.03:0,87,1315	0/0:25,0:25:69.24:0,69,1126	1/1:8,8:15:38.03:594,38,0	1/1:2,4:6:18.03:257,18,0	0/0:27,0:27:78.27:0,78,1273	1/1:6,5:11:30.09:460,30,0	0/0:34,0:34:99:0,102,1611	0/0:22,0:22:66.21:0,66,1053	0/0:31,0:31:90.29:0,90,1439	0/0:23,0:23:69.21:0,69,1095	1/1:12,8:20:60.16:821,60,0	1/1:11,3:14:42.11:517,42,0	0/0:28,0:28:84.29:0,84,1368	1/1:3,3:6:18.05:266,18,0	0/0:14,0:14:42.11:0,42,657	0/0:23,0:23:69.24:0,69,1118	0/0:37,0:37:99:0,108,1758	0/0:32,0:32:87.28:0,87,1388	1/1:5,15:20:57.18:955,57,0	1/1:2,9:11:30.08:482,30,0	1/1:7,7:14:33.08:485,33,0	1/1:7,16:23:60.64:1101,61,0	0/0:30,0:30:87.27:0,87,1373	0/0:27,0:27:81.26:0,81,1294	0/0:9,0:9:27.09:0,27,441
chr10	102232958	.	C	CGGTTATACAGT	28684.75	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=20.092;DP=726;FS=11.216;HRun=0;HaplotypeScore=348.6470;InbreedingCoeff=0.9998;MQ=67.36;MQ0=0;MQRankSum=-20.198;QD=113.83;ReadPosRankSum=3.838;VQSLOD=4.1159;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.28:0,93,3167	0/0:19,0:19:54.19:0,54,1874	0/0:33,0:33:90.02:0,90,2722	0/0:31,0:30:87.22:0,87,2776	0/0:25,0:25:72.23:0,72,2417	1/1:19,4:23:63.17:2482,63,0	1/1:16,2:18:54.18:2326,54,0	0/0:28,0:28:81.27:0,81,2657	1/1:16,4:20:54.14:2111,54,0	0/0:34,0:34:99:0,99,3379	0/0:22,0:22:66.23:0,66,2300	0/0:31,0:31:93.31:0,93,2923	0/0:23,0:23:66.20:0,66,2274	1/1:19,11:31:87.28:3633,87,0	1/1:15,11:26:75.26:3580,75,0	0/0:28,0:28:84.27:0,84,2843	1/1:9,3:12:30.10:1445,30,0	0/0:13,0:13:39.13:0,39,1421	0/0:23,0:23:69.19:0,69,2309	0/0:37,0:37:99:0,108,3543	0/0:30,0:30:87.25:0,87,2901	1/1:34,5:39:99:4341,102,0	1/1:21,1:22:63.09:2424,63,0	1/1:17,7:24:60.20:2502,60,0	1/1:31,5:36:99:3840,99,0	0/0:29,0:29:87.29:0,87,2833	0/0:27,0:27:81.26:0,81,2787	0/0:10,0:10:27.09:0,27,1001
chr10	102234072	.	CT	C	2407.22	PASS	AB=0.740;AC=26;AF=0.464;AN=56;BaseQRankSum=0.980;DP=516;FS=2.595;HRun=13;HaplotypeScore=62.0698;InbreedingCoeff=0.5687;MQ=77.55;MQ0=3;MQRankSum=-1.073;QD=8.48;ReadPosRankSum=4.337;VQSLOD=2.8248;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,1:23:28.83:0,29,405	0/0:9,0:11:29.88:0,30,277	0/0:31,0:18:19.73:0,20,143	0/0:29,0:15:5.15:0,5,69	0/0:28,0:28:44.84:0,45,402	1/1:3,17:20:23.67:304,24,0	1/1:5,14:19:32.79:240,33,0	1/1:12,13:24:32.66:239,33,0	1/1:8,7:16:16.82:115,17,0	0/0:20,0:20:30.02:0,30,281	0/0:19,0:19:42.07:0,42,407	0/0:14,0:14:18.02:0,18,170	0/0:17,0:17:38.98:0,39,354	0/1:13,2:15:27.70:88,0,28	1/1:3,10:13:17.89:131,18,0	0/1:14,1:15:9.63:10,0,213	1/1:7,15:24:30.82:209,31,0	0/0:7,0:9:19.76:0,20,125	0/1:12,14:23:28.60:243,0,29	0/1:13,17:31:9.77:241,0,10	1/1:2,5:8:16.90:115,17,0	1/1:3,3:6:8.92:66,9,0	0/1:7,9:17:3.35:133,0,3	1/1:5,9:14:26.79:195,27,0	1/1:7,11:18:27.04:233,27,0	0/0:9,0:22:37.55:0,38,212	0/1:10,7:16:13.79:54,0,14	0/0:5,0:9:8.62:0,9,43
chr10	102234780	.	CATA	C	8216.92	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.139;DP=622;FS=6.661;HRun=0;HaplotypeScore=91.5428;InbreedingCoeff=0.9937;MQ=76.53;MQ0=0;MQRankSum=-1.848;QD=40.68;ReadPosRankSum=4.168;VQSLOD=5.7993;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.18:0,51,1176	0/0:8,0:8:24.08:0,24,554	0/0:11,0:12:27.01:0,27,498	0/0:22,0:22:60.15:0,60,1182	0/0:30,0:30:87.21:0,87,1936	1/1:1,25:26:66.23:1125,66,0	1/1:0,17:15:39.13:665,39,0	0/0:40,0:40:99:0,114,2612	1/1:1,22:23:66.23:1112,66,0	0/0:29,0:29:81.27:0,81,1818	0/0:20,0:20:54.19:0,54,1228	0/0:15,0:15:45.15:0,45,1038	0/0:23,0:23:69.23:0,69,1540	1/1:0,23:23:54.18:894,54,0	1/1:3,27:30:69.24:1162,69,0	0/0:35,0:35:99:0,102,2269	1/1:0,5:5:12.04:205,12,0	0/0:15,0:15:45.11:0,45,988	0/0:19,0:19:54.18:0,54,1197	0/0:22,0:22:63.21:0,63,1410	0/0:50,0:50:99:0,146,3196	1/1:0,16:16:30.10:511,30,0	1/1:1,19:20:51.14:854,51,0	1/1:1,23:24:63.22:1074,63,0	1/1:1,17:18:36.12:614,36,0	0/0:34,0:34:96.32:0,96,2170	0/0:22,0:22:66.23:0,66,1519	0/0:6,0:6:18.06:0,18,415
chr10	102235093	.	T	TTCTCTCTCTCTCTCTC	3623.93	PASS	AB=1.000;AC=22;AF=0.407;AN=54;BaseQRankSum=4.320;DP=545;FS=13.390;HRun=0;HaplotypeScore=205.6898;InbreedingCoeff=0.4396;MQ=45.87;MQ0=37;MQRankSum=-5.315;QD=15.83;ReadPosRankSum=-2.650;VQSLOD=1.3125;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:45.13:0,45,1801	0/0:4,0:4:9:0,9,289	0/0:41,0:5:9.03:0,9,161	0/0:39,0:9:11.82:0,12,118	0/0:26,0:26:30.19:0,30,1880	1/1:20,0:19:9.02:239,9,0	./.	0/1:20,0:19:36.78:37,0,261	0/1:26,0:24:13.60:326,0,14	0/0:24,0:23:54.06:0,54,1858	0/0:22,0:22:47.36:0,47,1608	0/0:19,0:19:57.15:0,57,2136	0/0:14,0:13:26.81:0,27,823	1/1:11,0:11:9.43:201,9,0	1/1:7,0:7:6.02:150,6,0	0/0:24,0:23:48.03:0,48,2052	0/1:19,0:16:13.73:570,0,14	1/1:6,0:5:5.85:76,6,0	0/1:26,0:24:26.10:26,0,522	0/0:23,0:23:23.26:0,23,732	0/1:23,0:22:6.45:6,0,304	0/1:11,0:10:0:0,0,0	1/1:14,0:12:2.99:23,3,0	1/1:15,0:14:3.01:103,3,0	0/0:8,9:17:1.25:0,1,3	1/1:26,0:24:7.18:1674,7,0	0/0:20,0:18:24.14:0,24,893	1/1:5,0:5:9.03:193,9,0
chr10	102235107	.	CTGTGTGTG	C	887.40	PASS	AB=0.924;AC=21;AF=0.438;AN=48;BaseQRankSum=3.282;DP=562;FS=33.996;HRun=0;HaplotypeScore=151.2582;InbreedingCoeff=0.3065;MQ=43.36;MQ0=42;MQRankSum=-0.966;QD=3.34;ReadPosRankSum=-2.692;VQSLOD=0.7277;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:12.02:0,12,243	0/0:6,0:6:6.02:0,6,215	./.	./.	0/0:25,0:25:15.03:0,15,371	1/1:22,0:19:3.01:52,3,0	1/1:15,0:15:5.84:93,6,0	0/0:22,0:20:3.06:0,3,8	1/1:29,0:27:9.03:191,9,0	0/0:24,0:22:15.05:0,15,385	0/0:21,0:21:12.04:0,12,343	0/0:21,0:21:12.48:0,12,316	0/0:14,0:13:16.61:0,17,441	1/1:10,0:10:1.80:21,2,0	1/1:9,0:9:3.01:59,3,0	0/0:24,0:24:12.51:0,13,439	0/1:18,1:16:11.58:134,0,12	0/0:7,0:5:2.96:0,3,19	0/1:23,1:24:66.95:101,0,67	0/1:18,2:20:0.13:0,0,1	1/1:32,0:30:2.52:73,3,0	./.	./.	1/1:23,0:21:2.10:49,2,0	1/1:12,1:12:2:37,2,0	0/1:27,2:27:30.87:105,0,31	0/1:16,2:16:15.52:120,0,16	0/0:8,0:8:6.02:0,6,107
chr10	102236266	.	GT	G	983.09	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.077;DP=836;FS=0.671;HRun=3;HaplotypeScore=86.0130;InbreedingCoeff=0.9692;MQ=63.21;MQ0=17;MQRankSum=-1.231;QD=28.09;ReadPosRankSum=3.298;VQSLOD=2.9574;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:43:99:0,123,1702	0/0:13,0:12:36.12:0,36,516	0/0:29,0:27:72.24:0,72,1018	0/0:26,0:24:69.22:0,69,964	0/0:25,0:25:63.21:0,63,906	0/0:32,0:32:90.30:0,90,1292	0/0:22,0:22:63.14:0,63,860	0/0:38,0:37:99:0,99,1406	0/0:51,0:50:99:0,144,2048	0/0:47,0:47:99:0,138,1983	0/0:27,0:27:75.06:0,75,965	0/0:22,0:21:63.17:0,63,883	0/0:36,0:35:96.31:0,96,1380	0/0:38,0:37:99:0,102,1467	0/0:36,0:36:99:0,108,1529	0/0:41,0:41:99:0,114,1618	0/0:23,0:22:63.21:0,63,906	0/0:19,0:19:48.16:0,48,687	0/0:19,0:19:54.18:0,54,773	0/0:37,0:36:99:0,99,1419	0/0:28,0:27:81.27:0,81,1166	0/0:32,0:32:90.26:0,90,1267	0/0:29,0:29:87.29:0,87,1249	0/0:23,0:22:66.22:0,66,949	0/0:27,0:26:69.10:0,69,896	1/1:1,29:30:44.04:986,44,0	0/0:36,0:35:99:0,102,1467	1/1:0,5:5:9.03:112,9,0
chr10	102238036	.	TAA	T	4378.90	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=5.652;DP=458;FS=0.880;HRun=14;HaplotypeScore=67.5088;InbreedingCoeff=0.9503;MQ=62.31;MQ0=3;MQRankSum=-0.213;QD=14.79;ReadPosRankSum=4.118;VQSLOD=3.9105;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:18:39.54:0,40,478	0/0:6,0:7:18.04:0,18,222	0/0:11,0:12:17.21:0,17,157	0/0:10,0:7:5.68:0,6,38	0/0:27,0:35:76.34:0,76,827	1/1:3,25:28:69.02:638,69,0	1/1:3,6:9:11.97:111,12,0	1/1:5,0:27:52.43:236,52,0	1/1:4,13:17:23.97:222,24,0	0/0:14,0:15:33.09:0,33,430	0/0:14,0:16:45.04:0,45,497	0/0:14,0:14:33.05:0,33,423	0/0:13,0:14:38.60:0,39,496	1/1:2,12:15:32.99:305,33,0	1/1:1,20:21:57.04:527,57,0	0/0:12,0:12:21.07:0,21,294	1/1:1,8:10:14.88:186,15,0	0/0:3,0:9:21.04:0,21,211	1/1:3,0:14:27.04:112,27,0	1/1:5,2:33:63.79:312,64,0	1/1:2,0:9:13.66:59,14,0	1/1:4,9:12:14.97:139,15,0	1/1:2,20:23:47.76:427,48,0	1/1:1,7:9:5.86:102,6,0	1/1:3,11:15:20.82:241,21,0	1/1:5,8:14:17.84:213,18,0	1/1:4,0:16:27.55:122,28,0	1/1:7,16:21:47.70:428,48,0
chr10	102238535	.	C	CCACA	767.95	PASS	AB=0.992;AC=12;AF=0.222;AN=54;BaseQRankSum=-1.222;DP=572;FS=13.183;HRun=0;HaplotypeScore=100.9515;InbreedingCoeff=0.3946;MQ=59.81;MQ0=28;MQRankSum=-0.881;QD=3.27;ReadPosRankSum=-0.583;VQSLOD=0.6076;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:29:26.31:26,0,48	0/0:8,0:8:6.02:0,6,91	./.	0/1:57,0:18:0:0,0,0	0/0:22,0:22:8.36:0,8,101	0/0:16,0:16:6.02:0,6,82	0/0:20,0:19:20.72:0,21,278	1/1:27,0:26:9.01:106,9,0	0/0:15,0:16:18.03:0,18,225	0/0:13,0:12:5.13:0,5,71	0/0:11,0:11:3.01:0,3,46	0/0:13,0:12:21.06:0,21,298	0/0:11,0:13:11.81:0,12,148	0/0:14,0:15:9.02:0,9,120	0/0:12,0:11:9.03:0,9,139	0/0:8,0:7:6.01:0,6,74	0/1:27,0:27:9.20:9,0,308	0/0:13,0:17:7.26:0,7,77	0/1:18,0:18:27.01:138,0,27	1/1:16,7:24:12.04:281,12,0	1/1:19,12:32:6.02:140,6,0	0/0:8,0:8:3.01:0,3,46	0/0:13,0:13:3.48:0,3,43	0/0:27,0:29:21.05:0,21,276	0/0:12,0:12:9.47:0,9,80	0/0:9,0:23:18.01:0,18,166	1/1:13,0:15:17.53:217,18,0	0/0:4,0:7:6.01:0,6,56
chr10	102239616	.	C	CCAGGCTCCCG	2546.32	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.907;DP=615;FS=0.000;HRun=0;HaplotypeScore=181.7170;InbreedingCoeff=0.9836;MQ=77.67;MQ0=0;MQRankSum=-3.049;QD=101.85;ReadPosRankSum=-0.980;VQSLOD=3.1929;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,109,3334	0/0:5,0:5:15.02:0,15,355	0/0:23,0:23:63.19:0,63,1456	0/0:17,0:17:47.58:0,48,1039	0/0:18,0:18:54.16:0,54,1650	0/0:27,0:27:81.23:0,81,2552	0/0:37,0:37:99:0,105,3309	0/0:25,0:25:72.23:0,72,2113	0/0:17,0:17:51.16:0,51,1648	0/0:16,0:16:48.15:0,48,1478	0/0:17,0:17:48.12:0,48,1370	0/0:22,0:22:63.21:0,63,2052	0/0:24,0:24:72.21:0,72,2209	0/0:28,0:28:84.26:0,84,2645	0/0:19,0:19:54.15:0,54,1546	0/0:25,0:24:75.20:0,75,2204	0/0:28,0:28:81.26:0,81,2568	0/0:28,0:28:84.23:0,84,2634	0/0:17,0:17:48.13:0,48,1390	0/0:26,0:26:78.20:0,78,2232	0/0:39,0:39:99:0,111,3410	0/0:18,0:18:54.10:0,54,1235	0/0:15,0:15:39.11:0,39,1169	0/0:26,0:26:75.22:0,75,2323	0/0:18,0:18:51.15:0,51,1612	1/1:2,8:19:57.08:1858,57,0	0/0:18,0:18:54.17:0,54,1734	1/1:1,4:6:15.05:807,15,0
chr10	102240974	.	CAA	C	2988.04	PASS	AB=0.665;AC=29;AF=0.518;AN=56;BaseQRankSum=4.646;DP=619;FS=10.961;HRun=15;HaplotypeScore=87.5155;InbreedingCoeff=0.6489;MQ=75.16;MQ0=0;MQRankSum=0.479;QD=7.95;ReadPosRankSum=6.936;VQSLOD=0.0922;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:20:44.53:0,45,501	0/0:6,0:7:14.50:0,15,139	0/1:16,0:16:3.39:3,0,100	0/0:17,0:15:18.17:0,18,150	0/0:26,2:30:59.56:0,60,683	1/1:8,14:25:47.07:379,47,0	1/1:1,13:15:26.84:282,27,0	0/1:8,2:29:3.20:3,0,120	1/1:5,6:18:19.30:200,19,0	0/0:28,0:28:69.09:0,69,804	0/0:26,0:32:50.80:0,51,467	0/0:16,0:18:44.04:0,44,489	0/0:22,0:26:44.59:0,45,525	1/1:8,12:21:26.42:266,26,0	1/1:9,15:26:24.87:287,25,0	0/0:24,1:25:39.70:0,40,747	1/1:7,13:22:23.27:182,23,0	0/0:12,0:12:29.49:0,29,286	0/1:8,2:24:8.66:9,0,143	0/1:11,3:33:34.55:35,0,140	0/1:8,4:24:62.19:69,0,62	1/1:7,12:21:26.40:267,26,0	1/1:5,14:23:32.13:305,32,0	1/1:5,16:22:38.62:329,39,0	1/1:7,16:26:55.40:427,55,0	1/1:9,0:26:2.11:126,2,0	0/0:10,0:28:41.13:0,41,184	1/1:3,0:4:5.65:30,6,0
chr10	102242956	.	ATT	A	2910.53	PASS	AB=0.686;AC=24;AF=0.429;AN=56;BaseQRankSum=5.391;DP=530;FS=2.991;HRun=14;HaplotypeScore=90.7801;InbreedingCoeff=0.5854;MQ=64.21;MQ0=10;MQRankSum=-8.873;QD=11.50;ReadPosRankSum=2.323;VQSLOD=2.9497;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:41:98.64:0,99,1299	0/0:11,0:11:21.07:0,21,295	0/0:24,0:14:15.92:0,16,136	0/0:20,0:13:14.48:0,14,113	0/0:25,0:26:48.36:0,48,789	1/1:3,17:22:35.65:415,36,0	1/1:5,12:17:38.77:345,39,0	0/0:18,1:26:8.96:0,9,167	1/1:7,9:16:33.30:296,33,0	0/0:21,0:24:41.60:0,42,506	0/0:12,0:14:30.08:0,30,376	0/0:20,0:21:41.05:0,41,475	0/1:12,1:12:3.74:4,0,242	1/1:4,9:11:26.97:246,27,0	1/1:1,10:13:38.53:329,39,0	0/0:12,0:12:24.04:0,24,314	0/1:7,8:15:15.08:195,0,15	0/1:8,5:22:99:119,0,159	0/1:11,2:21:16.95:17,0,75	0/0:6,0:17:8.02:0,8,92	0/1:6,1:14:7.41:7,0,40	1/1:5,10:14:30.02:278,30,0	1/1:3,11:14:23.95:222,24,0	1/1:7,11:16:20.90:194,21,0	1/1:1,19:20:48.03:444,48,0	0/0:17,0:23:51.06:0,51,544	0/1:6,1:14:6.79:7,0,74	0/0:8,0:10:24.05:0,24,262
chr10	102242975	.	CT	C	4600.02	PASS	AB=0.900;AC=35;AF=0.648;AN=54;BaseQRankSum=8.429;DP=501;FS=2.518;HRun=8;HaplotypeScore=75.7100;InbreedingCoeff=0.9415;MQ=45.89;MQ0=26;MQRankSum=-10.142;QD=15.03;ReadPosRankSum=2.231;VQSLOD=5.1104;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,1:44:87.21:0,87,1002	0/0:9,0:9:18.04:0,18,204	0/1:8,0:4:0.42:0,0,12	./.	0/0:30,1:29:31.24:0,31,659	1/1:7,14:21:36.04:347,36,0	1/1:5,15:18:45.05:428,45,0	1/1:12,11:19:36:334,36,0	1/1:5,11:15:28.60:264,29,0	0/0:22,0:19:39.10:0,39,444	0/0:17,0:16:36.10:0,36,417	0/0:19,0:18:44.73:0,45,449	0/0:11,0:10:27.02:0,27,289	1/1:6,12:15:36.02:346,36,0	1/1:6,13:17:36.04:345,36,0	0/0:10,0:10:24.03:0,24,274	1/1:9,8:16:24.02:228,24,0	0/0:24,0:23:38.32:0,38,581	1/1:6,7:13:21.02:203,21,0	1/1:5,9:14:27:251,27,0	1/1:5,9:14:9:87,9,0	1/1:5,11:15:33.05:318,33,0	1/1:4,9:13:21.02:202,21,0	1/1:5,11:15:17.14:172,17,0	1/1:5,17:22:35.91:345,36,0	1/1:13,13:23:23.19:383,23,0	1/1:8,11:15:21.02:203,21,0	1/1:7,3:10:14.96:143,15,0
chr10	102243846	.	T	TC	14495.26	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=18.703;DP=630;FS=2.180;HRun=0;HaplotypeScore=158.8634;InbreedingCoeff=0.9994;MQ=86.02;MQ0=0;MQRankSum=-13.863;QD=37.26;ReadPosRankSum=2.540;VQSLOD=4.3053;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.22:0,84,1116	0/0:11,0:11:33.10:0,33,445	0/0:29,0:29:84.25:0,84,1128	0/0:24,0:24:62.36:0,62,823	0/0:23,0:23:69.18:0,69,898	1/1:0,17:17:45.15:673,45,0	1/1:0,26:26:60.20:896,60,0	1/1:3,24:26:75.25:1106,75,0	1/1:1,33:34:93.31:1384,93,0	0/0:32,0:32:96.28:0,96,1269	0/0:19,0:19:57.19:0,57,797	0/0:21,0:21:60.19:0,60,824	0/0:19,0:19:51.16:0,51,698	1/1:0,33:33:93.31:1384,93,0	1/1:0,24:24:69.23:1020,69,0	0/0:21,0:21:63.20:0,63,867	1/1:1,16:17:39.13:582,39,0	0/0:13,0:13:36.11:0,36,483	1/1:0,26:26:75.25:1121,75,0	1/1:1,22:23:60.20:893,60,0	1/1:0,22:22:30.10:439,30,0	1/1:1,18:19:45.15:671,45,0	1/1:0,16:16:39.60:587,40,0	1/1:0,20:20:26.59:391,27,0	1/1:1,22:23:57.19:841,57,0	1/1:0,23:23:66.22:987,66,0	1/1:0,29:29:78.02:1161,78,0	1/1:0,10:10:24.08:359,24,0
chr10	102245453	.	C	CA	10829.51	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-0.238;DP=562;FS=3.446;HRun=7;HaplotypeScore=81.5833;InbreedingCoeff=0.9833;MQ=76.31;MQ0=0;MQRankSum=-7.524;QD=31.03;ReadPosRankSum=0.764;VQSLOD=4.7990;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:66.10:0,66,637	0/0:4,0:4:6.01:0,6,58	0/0:21,0:22:56.07:0,56,503	0/0:10,0:10:20.88:0,21,197	0/0:32,0:32:87.12:0,87,835	1/1:1,14:16:45:522,45,0	1/1:6,11:17:36.07:418,36,0	1/1:3,17:20:54.17:652,54,0	1/1:2,17:19:25.19:587,25,0	0/0:27,0:27:60.09:0,60,579	0/0:17,0:17:48.08:0,48,464	0/0:17,0:17:48.08:0,48,464	0/0:20,0:20:54.02:0,54,510	1/1:1,20:21:57.17:688,57,0	1/1:2,18:20:54.17:652,54,0	0/0:12,0:12:33.05:0,33,319	1/1:4,21:25:63.08:714,63,0	0/0:24,0:24:43.91:0,44,492	1/1:7,13:19:45.13:533,45,0	1/1:5,30:35:93.29:1123,93,0	1/1:1,7:8:21.06:254,21,0	1/1:2,14:16:42.13:507,42,0	1/1:4,16:20:48.14:569,48,0	1/1:2,13:15:33.10:399,33,0	1/1:3,19:22:57.17:688,57,0	1/1:6,29:35:96.29:1149,96,0	1/1:3,26:29:84.26:1014,84,0	1/1:1,10:11:30.09:362,30,0
chr10	102245495	.	G	GA	10694.58	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=13.794;DP=540;FS=10.818;HRun=6;HaplotypeScore=98.0241;InbreedingCoeff=0.9896;MQ=73.44;MQ0=0;MQRankSum=-4.364;QD=30.47;ReadPosRankSum=0.495;VQSLOD=4.1714;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.15:0,69,702	0/0:7,0:7:21.03:0,21,207	0/0:20,0:20:51.57:0,52,516	0/0:12,0:12:30.03:0,30,295	0/0:20,0:20:45.10:0,45,459	1/1:2,14:16:32.86:415,33,0	1/1:2,18:20:54.13:661,54,0	1/1:6,30:36:90.28:1119,90,0	1/1:1,21:22:57.14:696,57,0	0/0:24,0:24:69.15:0,69,700	0/0:16,0:16:42.08:0,42,422	0/0:15,0:15:39.09:0,39,398	0/0:12,0:12:36.08:0,36,367	1/1:1,19:20:54.13:660,54,0	1/1:2,20:22:57.18:717,57,0	0/0:12,0:12:30.06:0,30,305	1/1:5,21:26:63.16:774,63,0	0/0:24,0:24:72.16:0,72,734	1/1:2,16:17:45.13:552,45,0	1/1:5,33:38:87.11:1023,87,0	1/1:1,3:4:8.99:95,9,0	1/1:0,16:16:36.03:417,36,0	1/1:2,22:24:60.11:718,60,0	1/1:4,8:12:18.06:226,18,0	1/1:1,20:21:60.19:754,60,0	1/1:3,21:24:41.61:826,42,0	1/1:2,18:20:54.17:679,54,0	1/1:3,9:12:30.08:362,30,0
chr10	102245564	.	GGA	G	1261.45	PASS	AB=0.909;AC=5;AF=0.089;AN=56;BaseQRankSum=6.782;DP=639;FS=0.000;HRun=0;HaplotypeScore=104.5945;InbreedingCoeff=0.7527;MQ=74.28;MQ0=4;MQRankSum=-1.590;QD=20.68;ReadPosRankSum=1.414;VQSLOD=3.9647;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:42.12:0,42,655	0/0:9,0:9:27.08:0,27,411	0/0:45,0:27:20.77:0,21,407	0/0:56,0:30:8.66:0,9,455	0/0:27,0:27:81.25:0,81,1302	0/0:20,0:20:54.16:0,54,833	0/0:14,0:14:39.13:0,39,657	0/0:24,0:24:21.87:0,22,852	0/0:18,0:18:45.15:0,45,748	0/0:28,2:30:24.80:0,25,1215	0/0:28,0:28:78.25:0,78,1261	0/0:14,0:14:33.11:0,33,556	0/0:17,1:18:20.59:0,21,780	0/1:18,2:20:23.07:23,0,723	0/0:17,0:17:48.16:0,48,799	0/0:22,0:22:63.20:0,63,1024	0/0:32,1:33:48.73:0,49,1346	0/0:17,0:17:43.94:0,44,584	0/0:12,0:12:21.21:0,21,487	0/0:25,0:25:54.18:0,54,894	0/0:9,0:8:24.06:0,24,377	0/0:21,0:21:57.18:0,57,926	0/0:16,0:16:45.15:0,45,752	0/0:15,0:15:36.12:0,36,597	0/0:33,0:33:99:0,99,1601	1/1:1,27:28:78.24:982,78,0	0/0:28,1:29:33.63:0,34,1049	1/1:2,11:13:30.10:385,30,0
chr10	102247010	.	A	AGCGC	2834.57	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=11.048;DP=541;FS=0.000;HRun=0;HaplotypeScore=136.0522;InbreedingCoeff=0.2982;MQ=62.71;MQ0=6;MQRankSum=-6.127;QD=10.31;ReadPosRankSum=0.635;VQSLOD=2.7371;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:51.15:0,51,781	0/0:5,0:5:12.04:0,12,201	0/0:17,0:16:47.89:0,48,729	0/0:21,0:16:23.76:0,24,719	0/0:21,0:20:45.14:0,45,713	0/1:18,0:17:18.93:47,0,19	0/1:25,0:25:40.63:54,0,41	1/1:24,0:24:47.50:785,47,0	1/1:19,0:19:5.04:79,5,0	0/0:20,0:20:43.33:0,43,725	0/0:25,0:25:54.18:0,54,874	0/0:22,0:22:22.26:0,22,320	0/0:20,0:20:42.99:0,43,638	0/1:13,0:13:7.47:7,0,40	0/1:18,0:18:10.40:10,0,19	0/0:21,0:21:48.15:0,48,817	1/1:16,0:15:8.39:130,8,0	0/0:26,0:26:70.53:0,71,1088	0/1:11,0:10:0.01:244,0,0	1/1:19,0:19:5.21:110,5,0	1/1:19,0:19:2.75:14,3,0	0/1:18,0:18:1.47:278,0,1	0/1:9,0:9:31.15:46,0,31	0/0:10,0:9:0.47:0,0,1	0/0:12,14:26:5.58:0,6,33	1/1:32,0:32:60.33:1024,60,0	0/1:22,0:21:27.80:86,0,28	0/1:12,0:12:60.92:94,0,61
chr10	102247011	.	G	GCGCA	5530.81	PASS	AB=0.770;AC=20;AF=0.357;AN=56;BaseQRankSum=9.757;DP=564;FS=42.389;HRun=0;HaplotypeScore=135.9867;InbreedingCoeff=0.0724;MQ=63.02;MQ0=6;MQRankSum=-8.837;QD=17.02;ReadPosRankSum=-3.489;VQSLOD=2.2886;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:60.14:0,60,1069	0/0:6,0:6:12.04:0,12,247	0/0:18,0:17:47.24:0,47,860	0/0:21,0:16:41.20:0,41,836	0/0:19,0:18:45.14:0,45,889	0/1:6,0:18:18.93:74,0,19	0/1:7,19:26:33.74:203,0,34	1/1:28,0:28:56.51:1364,57,0	0/1:8,11:19:9.69:110,0,10	0/0:19,0:19:46.35:0,46,842	0/0:24,0:24:54.10:0,54,1051	0/0:22,0:22:35.80:0,36,521	0/0:19,0:19:43:0,43,785	0/1:7,9:16:52.91:60,0,53	0/1:7,12:20:22.09:29,0,22	0/0:21,0:21:51.15:0,51,927	0/1:7,9:16:6.85:271,0,7	0/0:26,0:26:73.53:0,74,1314	0/1:11,0:10:24.53:398,0,25	0/1:21,0:21:4.05:314,0,4	1/1:5,13:19:0.98:49,1,0	1/1:18,1:19:19.90:594,20,0	0/1:9,0:9:84.98:86,0,85	0/0:3,5:10:0.47:0,0,1	0/1:25,1:26:10.94:11,0,61	1/1:6,29:37:58.86:1719,59,0	0/1:8,14:25:29.80:109,0,30	0/1:12,0:12:99:140,0,142
chr10	102248178	.	G	GA	8722.91	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=18.445;DP=566;FS=0.332;HRun=0;HaplotypeScore=131.2828;InbreedingCoeff=0.9273;MQ=79.36;MQ0=0;MQRankSum=-10.954;QD=35.32;ReadPosRankSum=0.877;VQSLOD=4.3095;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1665	0/0:11,0:11:33.11:0,33,461	0/0:21,0:21:63.11:0,63,795	0/1:18,0:18:23.03:23,0,457	0/0:28,0:28:81.27:0,81,1131	1/1:1,19:20:38.72:568,39,0	1/1:0,28:28:72.25:1140,72,0	0/0:12,0:12:29.99:0,30,330	1/1:1,23:24:69.23:1087,69,0	0/0:18,0:18:51.16:0,51,695	0/0:14,0:14:36.12:0,36,503	0/0:23,0:23:69.21:0,69,932	0/0:17,0:17:51.17:0,51,713	1/1:1,19:20:50.95:787,51,0	1/1:0,15:15:42.06:633,42,0	0/0:18,0:18:51.16:0,51,698	1/1:0,17:17:48.16:746,48,0	0/0:37,0:37:99:0,111,1496	0/0:14,0:14:36.10:0,36,452	0/0:12,0:12:36.07:0,36,422	0/0:35,0:35:97.14:0,97,1210	1/1:0,18:18:42.01:632,42,0	1/1:0,12:12:20.86:304,21,0	1/1:0,27:27:51.41:810,51,0	1/1:0,14:14:36.12:569,36,0	1/1:0,21:21:60.18:901,60,0	0/0:18,0:18:48.04:0,48,548	1/1:0,13:13:38.97:524,39,0
chr10	102248680	.	C	CGCATGCGTACATGCGT	636.75	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.044;DP=667;FS=0.000;HRun=0;HaplotypeScore=331.0105;InbreedingCoeff=0.7762;MQ=67.81;MQ0=3;MQRankSum=-2.550;QD=33.51;ReadPosRankSum=-0.794;VQSLOD=1.7268;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:96.33:0,96,3628	0/0:11,0:11:18.06:0,18,641	0/0:14,0:10:6.43:0,6,58	0/0:20,0:14:6.50:0,7,59	0/0:17,0:17:42.14:0,42,1502	0/0:19,0:19:40.86:0,41,1349	0/0:39,0:39:62.95:0,63,1942	0/0:41,0:41:90.12:0,90,2088	0/0:25,0:25:63.20:0,63,2557	0/0:23,0:23:59.90:0,60,2363	0/0:16,0:16:33.07:0,33,1097	0/0:34,0:34:84.27:0,84,3041	0/0:24,0:24:51.17:0,51,1845	0/0:20,0:20:48.45:0,48,1776	0/0:12,0:12:20.19:0,20,806	0/0:18,0:18:51.18:0,51,1955	0/0:35,0:35:67.09:0,67,2493	1/1:6,10:19:12.04:723,12,0	0/0:24,0:24:42.14:0,42,1311	0/0:22,0:22:45.14:0,45,1608	0/0:52,0:52:93.32:0,93,3288	0/0:15,0:15:33.11:0,33,1393	0/0:15,0:15:33.10:0,33,1186	0/0:28,0:28:62.75:0,63,2231	0/0:20,0:20:45.15:0,45,1814	0/0:22,0:22:45.12:0,45,1549	0/0:19,0:19:30.07:0,30,983	0/0:6,0:6:12.04:0,12,286
chr10	102248733	.	T	TTTCGTG	1118.33	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=8.193;DP=572;FS=1.829;HRun=0;HaplotypeScore=218.3304;InbreedingCoeff=0.8670;MQ=66.47;MQ0=0;MQRankSum=-6.480;QD=9.72;ReadPosRankSum=-5.611;VQSLOD=1.5069;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,157,3608	0/0:9,0:9:27.09:0,27,653	0/0:16,0:11:17.11:0,17,318	0/0:28,0:23:27.92:0,28,486	0/0:16,0:16:48.16:0,48,1142	0/0:19,0:19:15.87:0,16,285	0/0:39,0:39:76.23:0,76,1211	1/1:19,0:19:41.30:274,41,0	0/0:14,0:15:33:0,33,459	0/0:27,0:27:81.23:0,81,1791	0/0:13,0:13:36.11:0,36,833	0/0:35,0:35:99:0,105,2532	0/0:23,0:23:69.19:0,69,1508	0/0:16,0:16:29.49:0,29,549	0/0:11,0:11:18.98:0,19,288	0/0:19,0:19:52.04:0,52,1194	0/1:27,0:27:28.85:29,0,748	0/0:15,0:15:17.74:0,18,279	1/1:14,0:14:34.50:351,35,0	1/1:8,8:17:11.99:191,12,0	1/1:18,0:18:17.93:141,18,0	0/0:14,0:14:22.27:0,22,322	0/0:15,0:15:27.02:0,27,467	0/0:19,0:19:25.25:0,25,331	0/0:25,0:25:37.58:0,38,645	0/0:19,0:19:32.39:0,32,523	1/1:11,7:20:20.98:309,21,0	0/0:10,0:10:24.95:0,25,329
chr10	102248742	.	TGCGTGCGCGCGCGCGC	T	1810.24	PASS	AB=0.975;AC=13;AF=0.232;AN=56;BaseQRankSum=8.685;DP=562;FS=3.197;HRun=0;HaplotypeScore=281.4177;InbreedingCoeff=0.3664;MQ=63.50;MQ0=1;MQRankSum=-7.456;QD=13.12;ReadPosRankSum=-6.187;VQSLOD=1.1666;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,162,10237	0/0:9,0:9:27.09:0,27,1648	0/1:16,0:8:36.51:61,0,37	0/0:25,0:19:3.65:0,4,270	0/0:18,0:18:54.14:0,54,3590	0/0:18,0:18:16.02:0,16,906	0/0:37,0:37:64.75:0,65,3141	1/1:5,12:17:38.82:414,39,0	0/0:11,0:11:20.96:0,21,721	0/0:29,0:29:78.25:0,78,4599	0/0:12,0:12:36.09:0,36,2282	0/0:39,0:39:99:0,114,7601	0/0:23,0:23:69.14:0,69,4016	0/0:16,0:16:23.77:0,24,1282	0/0:11,0:11:10.60:0,11,502	0/0:21,0:21:56.69:0,57,3600	0/0:27,0:27:26.22:0,26,1988	0/1:15,0:15:52.04:52,0,1008	1/1:13,0:13:4.63:198,5,0	1/1:12,0:12:4.81:42,5,0	1/1:14,0:14:5.12:55,5,0	0/0:15,0:15:17.09:0,17,550	0/0:15,0:15:23.93:0,24,1091	0/0:15,0:15:12.02:0,12,545	0/0:28,0:28:35.35:0,35,1703	0/1:18,0:21:99:595,0,341	0/1:17,0:17:46.03:395,0,46	0/1:13,0:12:99:159,0,367
chr10	102248746	.	TGCGCGCGCGCGC	T	1685.29	PASS	AB=0.935;AC=15;AF=0.268;AN=56;BaseQRankSum=10.349;DP=532;FS=5.254;HRun=0;HaplotypeScore=231.6172;InbreedingCoeff=0.3401;MQ=62.15;MQ0=1;MQRankSum=-7.322;QD=9.80;ReadPosRankSum=-4.715;VQSLOD=1.3044;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,162,8530	0/0:9,0:9:27.08:0,27,1294	0/1:14,0:6:2.09:83,0,2	0/1:19,0:12:20.20:20,0,164	0/0:19,0:19:54.19:0,54,2956	0/0:18,0:18:16.45:0,16,723	0/0:37,0:37:61.11:0,61,2496	1/1:12,1:13:15:215,15,0	0/0:10,0:10:15.05:0,15,523	0/0:24,0:24:72.24:0,72,3672	0/0:12,0:12:36.12:0,36,1856	0/0:39,0:39:99:0,114,6081	0/0:23,0:23:66.16:0,66,3367	0/0:15,0:15:23.85:0,24,1017	0/0:9,0:9:7.59:0,8,368	0/0:20,0:20:57.02:0,57,3050	0/1:26,0:26:58.45:58,0,1666	0/1:12,0:14:75.28:75,0,820	1/1:11,0:11:20.42:208,20,0	1/1:12,0:12:5.97:68,6,0	1/1:9,1:13:6.59:57,7,0	0/0:13,0:13:11.35:0,11,404	0/0:14,0:14:20.96:0,21,856	0/0:14,0:14:12.04:0,12,434	0/0:27,0:27:32.89:0,33,1357	0/1:15,2:20:99:562,0,160	0/1:13,2:17:15.35:418,0,15	0/1:12,0:11:93.87:94,0,216
chr10	102249008	.	CTAAA	C	3781.77	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.425;DP=515;FS=0.471;HRun=0;HaplotypeScore=85.1473;InbreedingCoeff=0.9955;MQ=87.07;MQ0=0;MQRankSum=-4.395;QD=42.49;ReadPosRankSum=0.005;VQSLOD=3.8892;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.26:0,81,2090	0/0:7,0:7:21.07:0,21,539	0/0:17,0:17:50.52:0,51,1095	0/0:21,0:21:57.19:0,57,1237	0/0:27,0:27:81.27:0,81,2076	0/0:24,0:24:69.24:0,69,1862	0/0:12,0:12:33.11:0,33,830	1/1:3,20:23:57.18:1019,57,0	0/0:19,0:19:57.20:0,57,1538	0/0:28,0:27:78.27:0,78,1989	0/0:27,0:27:78.27:0,78,2101	0/0:13,0:13:36.12:0,36,972	0/0:16,0:16:48.16:0,48,1292	0/0:18,0:18:54.19:0,54,1414	0/0:17,0:17:51.18:0,51,1377	0/0:25,0:25:72.23:0,72,1836	0/0:28,0:28:84.29:0,84,2233	0/0:18,0:18:51.18:0,51,1342	1/1:1,15:16:45.13:796,45,0	1/1:3,11:14:29.99:528,30,0	1/1:1,19:20:39.13:740,39,0	0/0:6,0:6:18.06:0,18,484	0/0:12,0:12:36.11:0,36,904	0/0:22,0:22:66.18:0,66,1721	0/0:7,0:7:21.07:0,21,534	0/0:24,0:24:69.24:0,69,1826	1/1:2,14:16:39.05:699,39,0	0/0:8,0:8:24.04:0,24,568
chr10	102249788	.	CA	C	2769.72	PASS	AB=0.749;AC=32;AF=0.571;AN=56;BaseQRankSum=6.166;DP=627;FS=10.094;HRun=15;HaplotypeScore=72.3769;InbreedingCoeff=0.2270;MQ=75.13;MQ0=0;MQRankSum=0.286;QD=6.15;ReadPosRankSum=3.480;VQSLOD=1.9510;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:49.26:0,49,408	0/1:7,2:9:14.54:15,0,134	0/0:32,0:21:0.54:0,1,66	0/1:18,1:12:25.04:25,0,41	0/0:26,2:30:18.03:0,18,371	0/1:5,10:16:39.37:125,0,39	0/1:10,9:19:23.29:124,0,23	1/1:16,26:45:48.80:429,49,0	0/1:5,7:13:0.79:115,0,1	0/0:16,2:20:0.27:0,0,231	0/1:20,2:24:10.41:10,0,190	0/0:16,0:16:13.77:0,14,229	0/1:16,2:18:2.69:3,0,197	1/1:5,16:23:25.11:142,25,0	0/1:3,12:16:15.13:160,0,15	0/0:15,3:19:19.65:0,20,276	1/1:6,19:26:27.35:256,27,0	0/0:31,0:34:59.96:0,60,519	1/1:6,5:11:17.65:112,18,0	0/1:11,5:18:42.52:124,0,43	0/1:9,3:14:7.66:67,0,8	1/1:8,18:30:49.31:290,49,0	1/1:12,15:27:2.79:146,3,0	1/1:8,19:29:31.50:198,32,0	1/1:11,22:35:30.90:312,31,0	1/1:1,0:20:36.63:106,37,0	1/1:12,8:21:5.11:120,5,0	1/1:9,2:17:17.74:73,18,0
chr10	102249966	.	T	TACAC	454.87	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.059;DP=683;FS=4.056;HRun=0;HaplotypeScore=132.2484;InbreedingCoeff=0.9639;MQ=62.93;MQ0=15;MQRankSum=0.044;QD=11.97;ReadPosRankSum=-4.153;VQSLOD=2.3409;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:68.46:0,68,1014	0/0:10,0:10:27.05:0,27,399	0/0:24,0:16:36.08:0,36,509	0/0:34,0:22:60.07:0,60,875	0/0:24,0:24:50.18:0,50,836	0/0:26,0:25:51.17:0,51,843	0/0:33,0:32:48.07:0,48,746	0/0:32,0:32:80.89:0,81,1172	0/0:16,0:16:39.13:0,39,620	0/0:18,0:17:29.98:0,30,633	0/0:17,0:17:37.29:0,37,502	0/0:22,0:22:56.72:0,57,906	0/0:22,0:20:53.50:0,53,798	0/0:31,0:29:44.87:0,45,706	0/0:23,0:23:42.13:0,42,678	0/0:24,0:24:56.69:0,57,785	0/0:18,0:18:35.79:0,36,512	0/0:27,0:26:68.32:0,68,998	0/0:15,0:13:33.02:0,33,449	0/0:24,0:22:51.13:0,51,779	0/0:39,0:38:71.80:0,72,1284	0/0:24,0:24:50.86:0,51,782	0/0:21,0:21:36.09:0,36,520	0/0:44,0:44:93.04:0,93,1464	0/0:19,0:19:21.07:0,21,356	1/1:14,11:23:25.81:337,26,0	0/0:20,0:19:8.72:0,9,613	1/1:13,0:13:23.66:239,24,0
chr10	102249970	.	TACAC	T	2506.19	PASS	AB=0.758;AC=19;AF=0.365;AN=52;BaseQRankSum=4.464;DP=703;FS=3.314;HRun=0;HaplotypeScore=118.6362;InbreedingCoeff=0.7756;MQ=59.55;MQ0=15;MQRankSum=2.627;QD=9.11;ReadPosRankSum=5.411;VQSLOD=2.5553;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:44:52.20:0,52,661	0/0:8,0:10:12.04:0,12,246	./.	./.	0/0:25,0:25:33:0,33,510	1/1:12,15:26:20.51:330,21,0	0/1:20,12:31:2.58:42,0,3	0/0:31,0:31:20.73:0,21,142	1/1:7,10:17:24.08:379,24,0	0/1:17,1:19:5.91:6,0,509	0/0:20,0:20:41.75:0,42,562	0/0:23,0:24:47.62:0,48,759	0/0:24,0:22:41.80:0,42,651	1/1:14,16:28:24.08:379,24,0	1/1:12,10:22:15.05:237,15,0	0/0:21,0:23:41.40:0,41,743	1/1:14,2:16:10.42:223,10,0	0/0:27,0:28:34.04:0,34,507	0/0:14,0:12:17.99:0,18,265	0/0:26,0:24:30.54:0,31,577	0/0:42,0:41:50.94:0,51,654	1/1:13,12:26:17.90:265,18,0	0/1:11,10:21:10.97:86,0,11	1/1:21,25:46:39.02:615,39,0	1/1:5,13:18:9.03:142,9,0	0/0:22,0:20:40.81:0,41,480	0/0:23,0:23:39.03:0,39,654	0/0:16,0:16:30.40:0,30,302
chr10	102251613	.	GA	G	7045.83	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=4.520;DP=550;FS=7.504;HRun=10;HaplotypeScore=85.6961;InbreedingCoeff=0.9307;MQ=71.64;MQ0=1;MQRankSum=-1.699;QD=18.74;ReadPosRankSum=2.416;VQSLOD=5.6028;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:34:61.17:0,61,886	0/0:12,0:12:27.07:0,27,295	0/0:25,1:24:18.42:0,18,411	0/1:12,0:11:3.49:3,0,153	0/0:20,0:20:13.10:0,13,372	1/1:1,13:14:38.99:338,39,0	1/1:3,18:21:41.99:365,42,0	1/1:4,22:26:32.79:514,33,0	1/1:1,20:21:59.99:521,60,0	0/0:18,0:19:47.96:0,48,510	0/0:9,0:9:27.07:0,27,299	0/0:25,0:26:59.97:0,60,627	0/0:17,0:17:33.09:0,33,363	1/1:2,15:17:38.99:338,39,0	1/1:6,16:22:23.10:320,23,0	0/0:11,0:11:30.06:0,30,314	1/1:4,18:22:50.97:443,51,0	1/1:4,19:23:50.98:443,51,0	1/1:9,13:22:38.96:334,39,0	1/1:2,19:21:56.99:494,57,0	1/1:4,17:21:47.99:417,48,0	1/1:6,15:21:38.86:337,39,0	1/1:2,17:19:44.98:389,45,0	1/1:6,29:35:78.43:677,78,0	1/1:2,13:15:35.99:312,36,0	1/1:3,20:22:29.80:488,30,0	1/1:6,10:17:29.01:240,29,0	1/1:1,3:4:8.98:73,9,0
chr10	102252665	.	TTTATTA	T	1106.64	PASS	AC=16;AF=0.364;AN=44;BaseQRankSum=0.302;DP=247;FS=3.601;HRun=0;HaplotypeScore=58.7191;InbreedingCoeff=0.6755;MQ=71.97;MQ0=0;MQRankSum=-6.208;QD=15.16;ReadPosRankSum=1.208;VQSLOD=2.3593;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:3:5.88:0,6,37	0/0:4,0:4:9.03:0,9,292	./.	./.	0/0:13,0:13:18.06:0,18,566	1/1:9,5:14:9.03:184,9,0	1/1:3,3:7:9.03:153,9,0	0/0:28,0:32:18.22:0,18,120	1/1:2,3:5:3.01:61,3,0	0/0:8,0:8:12.04:0,12,373	0/0:6,0:6:6.02:0,6,180	0/0:4,0:4:6.02:0,6,195	0/0:11,0:11:3.01:0,3,97	1/1:2,4:6:11.40:192,11,0	1/1:5,1:6:3.01:61,3,0	0/0:7,0:7:9.03:0,9,278	1/1:5,7:12:9.03:184,9,0	1/1:7,0:14:8.34:123,8,0	0/0:9,0:17:10.06:0,10,33	0/0:13,0:15:3.37:0,3,9	0/0:5,0:6:1.55:0,2,4	./.	./.	./.	1/1:3,6:9:15.05:306,15,0	0/0:5,0:7:8.90:0,9,64	0/0:12,0:19:8.55:0,9,29	./.
chr10	102253657	.	CCTGTTGTTGCCTTTATACA	C	30590.40	PASS	AB=0.526;AC=35;AF=0.625;AN=56;BaseQRankSum=16.836;DP=628;FS=1.102;HRun=0;HaplotypeScore=308.6128;InbreedingCoeff=0.8858;MQ=77.31;MQ0=0;MQRankSum=-15.707;QD=77.44;ReadPosRankSum=2.938;VQSLOD=4.0437;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,9191	0/0:20,0:20:60.21:0,60,5052	0/0:19,0:19:54.19:0,54,3398	0/0:21,0:21:57.20:0,57,3654	0/0:24,0:24:72.25:0,72,5821	1/1:5,24:29:45.15:2424,45,0	1/1:7,23:30:42.14:2261,42,0	1/1:8,12:20:35.87:632,36,0	1/1:2,14:16:30.10:1617,30,0	0/0:25,0:25:75.26:0,75,6067	0/0:18,0:18:54.17:0,54,4369	0/0:26,0:26:78.27:0,78,5759	0/0:24,0:24:69.22:0,69,5705	1/1:6,20:26:48.11:2444,48,0	1/1:5,13:18:27.09:1451,27,0	0/0:19,0:19:54.19:0,54,4621	1/1:6,18:24:24.08:1086,24,0	1/1:5,15:20:27.09:1455,27,0	1/1:11,18:29:53.84:1855,54,0	1/1:4,19:23:42.14:2135,42,0	1/1:7,13:20:3.01:162,3,0	1/1:4,24:28:60.21:3074,60,0	1/1:2,13:15:30.10:1616,30,0	1/1:6,15:21:9.03:362,9,0	1/1:6,18:24:39.13:2100,39,0	0/1:2,18:20:99:1877,0,475	1/1:1,27:28:63.22:3393,63,0	1/1:0,4:4:12.04:647,12,0
chr10	102254872	.	A	AAAAC	4384.77	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-10.662;DP=650;FS=0.491;HRun=0;HaplotypeScore=102.7075;InbreedingCoeff=0.9495;MQ=65.02;MQ0=3;MQRankSum=2.490;QD=33.73;ReadPosRankSum=-0.975;VQSLOD=4.5813;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:54.08:0,54,824	0/0:11,0:11:12.04:0,12,191	0/0:17,0:14:8.52:0,9,112	0/0:20,0:15:9.03:0,9,132	0/0:46,0:45:87.26:0,87,1354	0/0:27,0:27:63.19:0,63,957	0/0:22,0:22:36.11:0,36,548	1/1:14,5:21:21:307,21,0	0/0:14,0:14:36.12:0,36,570	0/0:40,0:40:75.25:0,75,1173	0/0:25,0:25:39.12:0,39,599	0/0:24,0:24:45.15:0,45,715	0/0:18,0:18:51.16:0,51,787	0/0:11,0:11:27.09:0,27,429	0/0:26,0:26:48.15:0,48,721	0/0:23,0:23:48.14:0,48,718	0/0:34,0:34:78.27:0,78,1239	0/0:6,0:17:21.03:0,21,215	1/1:6,3:7:6.02:143,6,0	1/1:6,19:25:54.18:1206,54,0	1/1:8,8:16:24.08:573,24,0	0/0:30,0:31:60.18:0,60,910	0/0:29,0:29:36.06:0,36,519	0/0:32,0:32:60.67:0,61,1012	0/0:23,0:23:42.14:0,42,667	1/1:7,13:21:39.13:932,39,0	1/1:11,14:26:36.12:847,36,0	1/1:2,9:11:17.99:376,18,0
chr10	102255191	.	A	AAG	349.36	PASS	AB=0.563;AC=17;AF=0.315;AN=54;BaseQRankSum=4.319;DP=524;FS=11.913;HRun=0;HaplotypeScore=58.9157;InbreedingCoeff=0.7266;MQ=49.79;MQ0=24;MQRankSum=-0.787;QD=2.38;ReadPosRankSum=-1.558;VQSLOD=0.1185;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:41:80.93:0,81,622	0/0:9,0:9:20.84:0,21,189	0/0:17,0:6:9.91:0,10,91	0/0:12,0:3:5.70:0,6,39	0/0:27,0:25:67.91:0,68,464	1/1:1,0:14:3.01:33,3,0	1/1:2,0:13:3.01:33,3,0	0/0:41,0:40:76.69:0,77,619	1/1:1,0:14:3.01:30,3,0	0/0:33,0:33:90.02:0,90,731	0/0:17,0:16:27.80:0,28,222	0/0:14,0:12:32.79:0,33,256	0/0:9,0:9:17.38:0,17,117	0/1:2,6:9:2.94:33,0,3	./.	0/0:9,0:9:16.33:0,16,152	1/1:8,14:23:3.68:21,4,0	0/0:23,0:20:43.74:0,44,346	0/0:21,0:17:28.97:0,29,329	0/0:28,0:26:68.10:0,68,505	0/0:8,0:7:17.83:0,18,147	1/1:2,1:18:14.82:132,15,0	1/1:3,0:16:4.50:57,4,0	1/1:14,0:12:12.53:123,13,0	1/1:4,0:20:2.46:54,2,0	0/0:17,0:16:46.77:0,47,358	0/0:21,0:21:54.61:0,55,407	0/0:13,0:12:32.91:0,33,280
chr10	102258458	.	TA	T	3963.83	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.381;DP=460;FS=0.000;HRun=10;HaplotypeScore=95.5157;InbreedingCoeff=0.9390;MQ=68.91;MQ0=1;MQRankSum=-6.645;QD=22.91;ReadPosRankSum=1.326;VQSLOD=3.7658;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:81.15:0,81,865	0/0:7,0:7:18.05:0,18,199	0/0:18,0:17:9.69:0,10,227	0/0:9,0:8:3.56:0,4,70	0/0:21,0:21:57.12:0,57,613	1/1:2,16:18:50.98:441,51,0	1/1:1,8:9:23.99:208,24,0	0/0:20,0:20:51.12:0,51,550	1/1:1,19:20:56.99:495,57,0	0/0:16,0:16:39.10:0,39,426	0/0:22,0:23:62.93:0,63,641	0/0:9,0:9:24.02:0,24,246	0/0:15,0:15:42.09:0,42,444	1/1:1,11:12:32.99:286,33,0	1/1:1,10:11:32.99:286,33,0	0/0:15,0:15:39.11:0,39,431	1/1:1,12:13:35.99:312,36,0	1/1:8,15:23:53.84:449,54,0	0/0:13,0:13:39.08:0,39,411	0/0:24,0:24:69.15:0,69,738	0/0:1,0:1:3.01:0,3,33	1/1:3,18:21:53.98:468,54,0	1/1:2,15:17:47.99:419,48,0	1/1:1,6:7:11.85:104,12,0	1/1:2,20:22:56.98:494,57,0	0/0:9,0:19:52.25:0,52,343	0/0:25,0:25:75.04:0,75,810	0/0:0,0:21:45.45:0,45,227
chr10	102258491	.	TAAAA	T	5084.64	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=8.243;DP=535;FS=0.378;HRun=15;HaplotypeScore=132.9500;InbreedingCoeff=0.9599;MQ=69.75;MQ0=2;MQRankSum=-9.447;QD=30.09;ReadPosRankSum=5.755;VQSLOD=3.2549;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:36:87.17:0,87,1608	0/0:8,0:10:30.10:0,30,649	0/0:26,0:20:11.24:0,11,500	0/0:15,0:8:12.04:0,12,187	0/0:22,0:27:75.23:0,75,1527	1/1:2,18:20:54.16:736,54,0	1/1:6,6:12:14.96:204,15,0	0/0:7,0:16:24.57:0,25,186	1/1:6,14:20:42.07:552,42,0	0/0:18,0:19:45.10:0,45,812	0/0:21,0:25:69.22:0,69,1321	0/0:11,0:11:33.10:0,33,654	0/0:16,0:17:51.16:0,51,948	1/1:2,14:16:36.06:490,36,0	1/1:2,13:15:33.05:450,33,0	0/0:13,0:15:36.11:0,36,697	1/1:5,7:12:14.88:188,15,0	0/0:10,0:24:57.14:0,57,767	0/0:8,0:20:34.64:0,35,314	0/0:10,0:34:86.93:0,87,636	0/0:1,0:2:3.40:0,3,18	1/1:6,10:17:34.19:436,34,0	1/1:1,21:23:67.46:902,67,0	1/1:4,6:10:21:269,21,0	1/1:3,21:24:63.12:858,63,0	0/0:10,0:29:75.24:0,75,603	0/0:8,0:21:42.17:0,42,296	0/0:12,0:16:23.72:0,24,168
chr10	102258828	.	AGGTGTCT	A	529.80	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.046;DP=555;FS=1.322;HRun=0;HaplotypeScore=147.4343;InbreedingCoeff=0.9951;MQ=79.34;MQ0=0;MQRankSum=-4.203;QD=52.98;ReadPosRankSum=-0.598;VQSLOD=3.1789;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,4786	0/0:16,0:16:48.16:0,48,1895	0/0:13,0:13:24.08:0,24,916	0/0:17,0:17:31.71:0,32,1169	0/0:22,0:22:63.22:0,63,2472	0/0:23,0:23:69.22:0,69,2637	0/0:20,0:20:57.20:0,57,2129	0/0:13,0:13:36.12:0,36,1440	0/0:20,0:20:57.20:0,57,2275	0/0:22,0:22:63.22:0,63,2511	0/0:21,0:21:63.22:0,63,2517	0/0:16,0:16:48.16:0,48,1918	0/0:19,0:19:54.17:0,54,2057	0/0:20,0:20:60.21:0,60,2314	0/0:21,0:21:63.22:0,63,2510	0/0:22,0:21:66.23:0,66,2640	0/0:35,0:34:99:0,102,3968	1/1:1,9:10:24.08:623,24,0	0/0:13,0:13:39.13:0,39,1468	0/0:23,0:23:66.21:0,66,2545	0/0:16,0:16:45.15:0,45,1687	0/0:19,0:19:50.38:0,50,2008	0/0:24,0:24:72.25:0,72,2815	0/0:23,0:23:66.23:0,66,2618	0/0:13,0:13:36.12:0,36,1427	0/0:21,0:21:60.21:0,60,2394	0/0:16,0:16:48.16:0,48,1919	0/0:12,0:12:36.12:0,36,1439
chr10	102259346	.	CTGTGTGTGTGTGTGTGTGTGTGTG	C	861.83	PASS	AB=0.667;AC=9;AF=0.180;AN=50;BaseQRankSum=3.558;DP=552;FS=9.557;HRun=0;HaplotypeScore=273.9207;InbreedingCoeff=0.5175;MQ=61.94;MQ0=34;MQRankSum=-2.580;QD=8.79;ReadPosRankSum=0.165;VQSLOD=0.9978;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:5.80:0,6,263	0/0:10,0:10:15.05:0,15,1193	0/0:34,0:18:6.02:0,6,171	0/0:34,0:23:18.02:0,18,404	0/0:6,0:11:12.01:0,12,311	./.	0/0:12,0:11:1.82:0,2,5	0/0:27,0:24:30.53:0,31,1031	0/1:6,3:12:31.86:180,0,32	0/0:22,0:20:30.10:0,30,2051	0/0:17,0:15:27.09:0,27,2123	0/0:18,0:15:9.03:0,9,679	0/0:13,0:13:24.04:0,24,1900	1/1:13,9:24:9.03:525,9,0	1/1:15,0:17:6.01:138,6,0	0/0:31,0:31:65.60:0,66,5234	1/1:18,7:23:3.01:139,3,0	0/0:18,0:16:33.11:0,33,1888	0/0:18,0:20:17.99:0,18,661	0/0:10,0:15:3.01:0,3,48	0/0:36,0:33:21.07:0,21,593	./.	1/1:12,7:19:0.88:2,1,0	0/0:18,8:28:1.88:0,2,214	./.	0/0:15,0:16:23.75:0,24,1109	0/0:15,0:14:21.07:0,21,628	0/0:11,0:10:18.04:0,18,775
chr10	102259385	.	TGTGTGTGTGAGAGA	T	1346.41	PASS	AB=0.945;AC=13;AF=0.283;AN=46;BaseQRankSum=3.445;DP=425;FS=18.979;HRun=0;HaplotypeScore=132.8868;InbreedingCoeff=0.1838;MQ=42.44;MQ0=57;MQRankSum=0.764;QD=8.06;ReadPosRankSum=2.008;VQSLOD=0.8434;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,24:35:0.10:48,0,0	0/0:8,0:8:15.02:0,15,356	./.	./.	0/0:13,0:11:5.99:0,6,63	./.	0/1:9,0:5:0:0,0,0	./.	1/1:9,0:7:3.01:55,3,0	0/0:18,0:14:38.90:0,39,709	0/0:17,0:14:12.53:0,13,559	0/0:22,0:19:20.50:0,20,453	0/0:17,0:17:49.41:0,49,1072	0/1:17,0:14:44.79:143,0,45	0/0:19,0:16:9.44:0,9,231	0/0:27,0:26:65.02:0,65,1794	0/0:20,0:15:4.54:0,5,180	0/0:19,0:15:34:0,34,1014	0/1:14,0:10:99:153,0,153	0/0:7,0:7:1.24:0,1,3	0/1:30,0:26:99:267,0,342	./.	1/1:10,0:10:0.47:1,0,0	0/0:24,0:21:11.41:0,11,302	0/0:10,0:9:2.99:0,3,23	0/1:20,0:20:99:366,0,144	0/1:13,0:11:39.94:241,0,40	1/1:7,0:6:11.81:204,12,0
chr10	102259800	.	C	CG	5298.47	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-8.985;DP=691;FS=0.000;HRun=8;HaplotypeScore=74.6461;InbreedingCoeff=0.9974;MQ=88.23;MQ0=0;MQRankSum=-2.271;QD=24.42;ReadPosRankSum=-0.412;VQSLOD=5.2225;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,2:39:60.11:347,60,0	0/0:15,0:15:39.02:0,39,357	0/0:29,0:29:64.81:0,65,543	0/0:23,0:24:50.94:0,51,450	0/0:24,0:24:57.02:0,57,521	0/0:42,0:42:99:0,114,1043	0/0:26,0:26:60.02:0,60,549	1/1:7,7:14:15.01:151,15,0	0/0:21,0:21:60.03:0,60,549	0/0:28,0:28:75.04:0,75,686	0/0:31,1:32:43.41:0,43,650	0/0:21,0:21:51.02:0,51,467	0/0:24,0:24:54.01:0,54,494	0/0:26,0:26:63.03:0,63,576	0/0:20,0:20:54.03:0,54,494	0/0:31,0:31:87.04:0,87,796	0/0:12,0:12:30:0,30,269	1/1:0,12:12:36.11:415,36,0	1/1:3,14:17:42.12:480,42,0	1/1:3,22:25:63.15:711,63,0	1/1:1,31:32:90.27:1039,90,0	0/0:27,0:27:53.95:0,54,486	0/0:23,0:23:62.99:0,63,568	0/0:26,0:26:63.02:0,63,576	0/0:23,0:23:63.01:0,63,571	1/1:4,28:32:59.68:923,60,0	1/1:3,22:26:57.13:643,57,0	1/1:3,17:20:51.15:588,51,0
chr10	102259975	.	A	AGAGAGG	5750.81	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=0.654;DP=708;FS=4.472;HRun=0;HaplotypeScore=180.4276;InbreedingCoeff=0.8886;MQ=58.19;MQ0=14;MQRankSum=-9.962;QD=20.84;ReadPosRankSum=-0.149;VQSLOD=4.0535;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:57.18:0,57,1136	0/0:5,0:5:3.01:0,3,62	0/0:41,0:27:27.09:0,27,435	0/0:50,0:28:7.37:0,7,128	0/0:31,0:31:75.24:0,75,1426	1/1:11,10:24:12.04:377,12,0	1/1:9,10:24:15.05:443,15,0	0/0:18,0:28:16.75:0,17,81	1/1:11,15:27:27.09:881,27,0	0/0:24,0:24:36.12:0,36,701	0/0:16,0:16:39.12:0,39,769	0/0:27,0:26:63.12:0,63,1132	0/0:23,0:22:45.12:0,45,826	1/1:10,15:26:33.11:1065,33,0	1/1:13,16:29:27.09:880,27,0	0/0:31,0:31:57.20:0,57,1167	1/1:13,10:23:6.02:196,6,0	1/1:7,5:12:6.02:154,6,0	0/0:10,0:15:11.79:0,12,115	0/0:9,0:26:42.37:0,42,525	0/0:13,0:17:5.85:0,6,54	1/1:19,18:38:18.06:563,18,0	1/1:5,8:14:13.64:485,14,0	1/1:20,11:31:9.50:231,10,0	1/1:12,11:23:15.05:477,15,0	0/0:23,0:21:51.17:0,51,1032	0/0:8,0:21:41.80:0,42,520	0/0:14,0:14:15.05:0,15,302
chr10	102260831	.	TAC	T	7122.87	PASS	AB=0.795;AC=20;AF=0.357;AN=56;BaseQRankSum=0.332;DP=858;FS=9.097;HRun=0;HaplotypeScore=135.6879;InbreedingCoeff=0.8271;MQ=67.39;MQ0=7;MQRankSum=3.415;QD=23.66;ReadPosRankSum=5.233;VQSLOD=5.5209;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:68:99:0,126,1141	0/1:12,1:13:6.09:6,0,402	0/0:57,0:30:51.06:0,51,711	0/0:51,1:32:36.12:0,36,565	0/0:32,1:33:51.10:0,51,1293	1/1:10,22:32:63.15:744,63,0	0/1:19,19:39:7.33:568,0,7	0/0:31,0:31:66.22:0,66,1035	1/1:5,20:28:17.66:667,18,0	0/0:30,0:30:69.23:0,69,1098	0/0:16,0:16:13.55:0,14,553	0/0:41,0:42:97.19:0,97,1717	0/0:32,0:32:78.27:0,78,1245	1/1:6,23:30:28.28:753,28,0	1/1:4,29:34:87.10:1027,87,0	0/0:33,1:34:54.11:0,54,1355	1/1:4,28:31:75.23:905,75,0	0/0:15,0:33:66.01:0,66,656	0/0:17,0:17:30.07:0,30,426	0/0:18,1:19:5.97:0,6,565	0/0:36,0:35:84.29:0,84,1346	1/1:5,9:14:27.08:326,27,0	1/1:2,18:22:56.84:643,57,0	1/1:6,32:38:96.29:1158,96,0	1/1:6,13:19:27.08:326,27,0	0/0:27,1:28:36.04:0,36,1042	0/0:27,1:28:42.07:0,42,1166	0/0:1,0:1:3.01:0,3,48
chr10	102260978	.	A	AT	3921.51	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-13.893;DP=659;FS=0.000;HRun=8;HaplotypeScore=60.9265;InbreedingCoeff=0.9758;MQ=75.15;MQ0=0;MQRankSum=-0.934;QD=26.14;ReadPosRankSum=-2.871;VQSLOD=3.2067;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:41:99:0,107,960	0/0:9,0:9:18.01:0,18,165	0/0:13,0:13:29.88:0,30,254	0/0:13,0:13:29.07:0,29,241	0/0:20,0:20:50.99:0,51,460	0/0:23,0:22:59.99:0,60,539	0/0:20,0:20:57.01:0,57,516	1/1:7,23:30:69.18:784,69,0	0/0:22,0:22:57.02:0,57,522	0/0:32,0:32:84.03:0,84,766	0/0:24,0:24:63.02:0,63,572	0/0:44,0:44:99:0,114,1043	0/0:23,0:24:68.07:0,68,610	0/0:25,0:25:72.04:0,72,659	0/0:29,0:29:81.01:0,81,734	0/0:29,0:28:75.04:0,75,687	0/0:19,0:19:44.99:0,45,406	0/0:20,0:20:48.01:0,48,439	1/1:5,17:22:26.71:561,27,0	1/1:3,16:19:45.13:519,45,0	1/1:2,22:24:60.18:692,60,0	0/0:16,0:16:42.02:0,42,384	0/0:27,0:27:75.03:0,75,686	0/0:39,0:39:99:0,108,988	0/0:20,0:20:54.02:0,54,494	1/1:7,18:25:5.24:568,5,0	1/1:3,14:17:39.12:450,39,0	1/1:2,11:13:30.09:346,30,0
chr10	102261568	.	AG	A	3505.56	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=7.383;DP=447;FS=5.299;HRun=6;HaplotypeScore=50.0435;InbreedingCoeff=0.9642;MQ=67.25;MQ0=5;MQRankSum=1.498;QD=24.01;ReadPosRankSum=2.383;VQSLOD=3.3821;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:75.20:0,75,941	0/0:5,0:5:9.03:0,9,118	0/0:37,0:13:18.75:0,19,252	0/0:42,0:16:25.12:0,25,263	0/0:11,0:11:27.07:0,27,339	1/1:4,10:14:8.18:239,8,0	1/1:0,15:15:39.10:419,39,0	0/0:21,0:21:60.18:0,60,759	1/1:0,18:18:36.09:387,36,0	0/0:10,0:10:20.96:0,21,251	0/0:11,0:11:27.09:0,27,355	0/0:15,0:15:42.06:0,42,516	0/0:11,0:11:24.08:0,24,312	1/1:0,11:11:27.07:290,27,0	1/1:1,12:13:36.09:386,36,0	0/0:14,0:14:39.13:0,39,513	1/1:4,20:24:48.08:503,48,0	0/0:9,0:9:13.55:0,14,288	0/0:8,0:8:24.08:0,24,314	0/0:12,0:12:36.09:0,36,444	0/0:30,0:30:87.28:0,87,1138	1/1:0,10:10:20.07:252,20,0	1/1:1,12:13:33.08:354,33,0	1/1:0,18:18:45.11:482,45,0	1/1:2,8:10:18.04:193,18,0	0/0:15,0:15:42.14:0,42,552	0/0:14,0:14:39.11:0,39,496	0/0:3,0:3:9.01:0,9,102
chr10	102262141	.	CA	C	9827.29	PASS	AB=0.846;AC=21;AF=0.375;AN=56;BaseQRankSum=18.780;DP=640;FS=0.623;HRun=1;HaplotypeScore=84.6313;InbreedingCoeff=0.9235;MQ=88.27;MQ0=0;MQRankSum=-2.837;QD=36.94;ReadPosRankSum=5.064;VQSLOD=5.0984;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,2228	0/1:9,2:11:50.83:51,0,364	0/0:23,1:24:43.19:0,43,1016	0/0:20,0:20:59.50:0,60,859	0/0:19,0:19:54.17:0,54,839	1/1:0,26:26:63.21:881,63,0	1/1:0,29:29:81.27:1133,81,0	0/0:30,0:30:90.28:0,90,1376	1/1:0,28:28:81.27:1133,81,0	0/0:20,0:20:60.19:0,60,937	0/0:12,0:12:33.11:0,33,527	0/0:28,0:28:84.27:0,84,1320	0/0:18,0:18:54.17:0,54,840	1/1:0,18:18:51.17:713,51,0	1/1:0,27:27:78.26:1091,78,0	0/0:18,0:18:54.18:0,54,863	1/1:0,22:22:54.18:755,54,0	0/0:23,0:23:66.17:0,66,1003	0/0:21,0:21:63.21:0,63,1006	0/0:25,0:25:75.26:0,75,1199	0/0:28,0:28:81.25:0,81,1270	1/1:0,15:15:39.13:546,39,0	1/1:0,24:24:66.22:923,66,0	1/1:0,49:49:99:1888,135,0	1/1:0,17:17:51.17:713,51,0	0/0:11,0:11:30.10:0,30,480	0/0:21,0:21:63.21:0,63,1007	0/0:9,0:9:27.09:0,27,432
chr10	102263961	.	C	CT	4854.63	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=-13.789;DP=667;FS=0.708;HRun=9;HaplotypeScore=111.1008;InbreedingCoeff=0.8355;MQ=82.45;MQ0=1;MQRankSum=-2.953;QD=20.57;ReadPosRankSum=-1.293;VQSLOD=3.8794;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:31:20.27:678,20,0	0/0:13,0:13:32.98:0,33,286	0/0:38,2:34:7.02:0,7,461	0/0:31,0:31:35.52:0,36,411	0/0:29,0:29:80.98:0,81,703	0/0:20,0:20:23.32:0,23,55	0/0:29,0:29:35.45:0,35,84	1/1:6,23:29:64.96:683,65,0	0/0:22,0:22:17.40:0,17,40	0/0:23,0:23:62.99:0,63,547	0/0:25,0:25:65.97:0,66,569	0/0:22,2:24:29.80:0,30,488	0/0:23,0:23:65.98:0,66,573	0/0:17,0:17:16.78:0,17,40	0/0:27,0:27:30.82:0,31,72	0/0:29,0:29:77.96:0,78,673	0/0:29,0:29:26.30:0,26,62	0/0:16,0:16:47.99:0,48,416	1/1:3,21:24:63.13:675,63,0	1/1:3,28:31:76.72:817,77,0	1/1:2,18:20:54.13:588,54,0	0/1:25,0:26:6.74:7,0,32	0/0:11,0:11:10.87:0,11,25	0/1:14,0:14:6.03:6,0,12	0/0:20,0:20:21.71:0,22,51	1/1:7,19:26:57.15:631,57,0	1/1:5,25:30:40.98:672,41,0	1/1:2,3:5:9.02:100,9,0
chr10	102263968	.	TTTC	T	1571.39	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.896;DP=666;FS=0.000;HRun=0;HaplotypeScore=143.9369;InbreedingCoeff=0.9965;MQ=79.23;MQ0=1;MQRankSum=-2.322;QD=7.38;ReadPosRankSum=1.846;VQSLOD=3.0546;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:73.48:0,73,1023	0/0:14,0:14:42.13:0,42,810	0/0:39,0:33:84.01:0,84,1382	0/0:31,0:28:65.68:0,66,1208	0/0:30,0:30:90.27:0,90,1766	1/1:19,1:20:40.43:197,40,0	1/1:26,1:27:58.56:277,59,0	0/0:26,0:26:31.73:0,32,779	1/1:23,1:24:30.66:134,31,0	0/0:25,0:25:75.21:0,75,1406	0/0:25,0:25:75.22:0,75,1461	0/0:23,0:23:66.23:0,66,1319	0/0:23,0:23:66.22:0,66,1384	1/1:16,0:16:27.78:115,28,0	1/1:32,0:32:51.88:212,52,0	0/0:27,0:27:78.23:0,78,1562	1/1:24,0:24:49.46:196,49,0	0/0:17,0:17:48.16:0,48,990	0/0:28,0:28:19.56:0,20,778	0/0:34,0:34:99:0,99,1250	0/0:21,0:21:52.90:0,53,711	1/1:24,1:25:27.35:273,27,0	1/1:14,0:14:21.80:108,22,0	1/1:12,1:13:21.89:130,22,0	1/1:18,0:18:37.50:150,37,0	0/0:22,0:22:63.18:0,63,867	0/0:29,0:29:75.21:0,75,996	0/0:6,0:6:17.95:0,18,224
chr10	102263969	.	TTC	T	6250.43	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=7.143;DP=662;FS=1.069;HRun=0;HaplotypeScore=114.2831;InbreedingCoeff=0.9981;MQ=79.33;MQ0=1;MQRankSum=-2.628;QD=30.05;ReadPosRankSum=2.408;VQSLOD=6.8573;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:80.70:0,81,784	0/0:14,0:14:42.12:0,42,655	0/0:39,0:33:83.98:0,84,1107	0/0:31,0:28:67.57:0,68,1000	0/0:30,0:30:90.26:0,90,1433	1/1:1,19:20:45.13:620,45,0	1/1:3,24:27:74.56:984,75,0	0/0:26,0:26:42.05:0,42,590	1/1:3,19:22:38.41:500,38,0	0/0:26,0:26:78.17:0,78,1169	0/0:25,0:25:75.22:0,75,1192	0/0:23,0:23:66.21:0,66,1051	0/0:23,0:23:66.21:0,66,1111	1/1:2,14:16:35.79:481,36,0	1/1:2,28:30:65.85:885,66,0	0/0:26,0:26:78.21:0,78,1263	1/1:1,22:23:56:773,56,0	0/0:17,0:17:48.16:0,48,799	0/0:28,0:28:33.78:0,34,616	0/0:34,0:34:91.12:0,91,908	0/0:21,0:21:60.02:0,60,564	1/1:10,15:25:68.34:792,68,0	1/1:2,12:14:24.03:318,24,0	1/1:2,11:13:24.48:299,24,0	1/1:2,16:18:42.14:598,42,0	0/0:22,0:22:63.07:0,63,621	0/0:31,0:31:81.08:0,81,773	0/0:6,0:6:17.94:0,18,174
chr10	102263970	.	TC	T	3018.28	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=10.953;DP=651;FS=0.330;HRun=1;HaplotypeScore=110.1218;InbreedingCoeff=0.9974;MQ=80.13;MQ0=1;MQRankSum=-2.637;QD=14.94;ReadPosRankSum=2.218;VQSLOD=3.5285;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:81.34:0,81,525	0/0:14,0:14:42.11:0,42,524	0/0:39,1:34:80.11:0,80,936	0/0:30,0:27:44.95:0,45,775	0/0:31,0:31:93.23:0,93,1157	1/1:20,0:20:44.31:289,44,0	1/1:25,2:27:73.98:529,74,0	0/0:24,0:24:20.32:0,20,332	1/1:21,1:22:41.50:300,41,0	0/0:26,0:26:78.17:0,78,952	0/0:25,0:25:75.21:0,75,951	0/0:23,0:23:66.10:0,66,831	0/0:22,0:22:66.22:0,66,876	1/1:15,1:16:35.57:256,36,0	1/1:28,2:30:65.13:452,65,0	0/0:26,0:26:78.20:0,78,1001	1/1:22,0:22:55.24:356,55,0	0/0:17,0:17:48.15:0,48,634	0/0:27,0:27:35.25:0,35,429	0/0:34,0:34:92.67:0,93,589	0/0:21,0:21:58.44:0,58,350	1/1:22,2:24:57.45:451,57,0	1/1:12,0:12:23.53:155,24,0	1/1:12,1:13:26.61:180,27,0	1/1:16,0:16:41.41:273,41,0	0/0:21,0:21:61.54:0,62,378	0/0:30,0:30:79.22:0,79,505	0/0:6,0:6:17.67:0,18,126
chr10	102264443	.	AGTGTTTGCCGCT	A	14420.86	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=16.217;DP=618;FS=2.662;HRun=0;HaplotypeScore=212.2545;InbreedingCoeff=0.9969;MQ=90.11;MQ0=0;MQRankSum=-16.977;QD=81.94;ReadPosRankSum=4.106;VQSLOD=4.7063;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,166,8946	0/0:14,0:14:42.14:0,42,2449	0/0:29,0:29:81.26:0,81,4066	0/0:27,0:27:75.26:0,75,3927	0/0:29,0:29:84.26:0,84,4540	1/1:0,20:20:48.16:1805,48,0	1/1:0,16:16:33.11:1240,33,0	0/0:21,0:21:60.16:0,60,2532	1/1:0,19:19:48.16:1805,48,0	0/0:25,0:25:72.23:0,72,3805	0/0:17,0:17:48.14:0,48,2457	0/0:18,0:18:48.15:0,48,2447	0/0:30,0:30:87.28:0,87,4789	1/1:1,13:14:30.10:1088,30,0	1/1:1,22:23:54.19:1993,54,0	0/0:20,0:20:60.19:0,60,3292	1/1:2,17:19:33.11:1219,33,0	0/0:17,0:17:51.15:0,51,2737	0/0:26,0:26:63.21:0,63,3540	0/0:28,0:27:78.24:0,78,4206	0/0:23,0:23:63.18:0,63,3253	1/1:0,24:24:57.20:2119,57,0	1/1:0,8:8:21.07:730,21,0	1/1:2,9:11:15.05:558,15,0	1/1:1,21:22:51.18:1863,51,0	0/0:25,0:25:72.25:0,72,4226	0/0:23,0:23:69.22:0,69,4037	0/0:12,0:12:36.12:0,36,2058
chr10	102266099	.	TTCTCTCTCTCTC	T	749.82	PASS	AB=0.889;AC=9;AF=0.375;AN=24;BaseQRankSum=1.936;DP=328;FS=0.000;HRun=0;HaplotypeScore=79.6944;InbreedingCoeff=0.3556;MQ=45.25;MQ0=135;MQRankSum=-0.669;QD=12.71;ReadPosRankSum=0.106;VQSLOD=1.6520;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:9,0:5:6.02:0,6,106	./.	./.	./.	./.	./.	0/0:23,0:15:0.89:0,1,2	./.	0/0:13,0:11:3.01:0,3,155	./.	0/0:9,0:8:3.48:0,3,49	1/1:9,0:8:0.89:2,1,0	./.	0/0:4,3:6:0.47:0,0,1	0/0:14,0:10:2.94:0,3,18	1/1:8,1:1:3.01:101,3,0	0/1:7,0:4:30.01:59,0,30	1/1:7,3:7:12:390,12,0	./.	./.	./.	./.	./.	./.	0/0:12,0:5:7.84:0,8,127	1/1:14,6:18:9.03:295,9,0	./.
chr10	102266445	.	G	GCACACACA	2389.21	PASS	AB=0.981;AC=28;AF=0.560;AN=50;BaseQRankSum=0.124;DP=439;FS=10.369;HRun=0;HaplotypeScore=121.7139;InbreedingCoeff=0.5636;MQ=51.19;MQ0=16;MQRankSum=-3.014;QD=8.15;ReadPosRankSum=-2.627;VQSLOD=1.0359;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:50,0:52:99:137,0,370	0/0:4,0:5:5.56:0,6,120	./.	./.	0/0:9,0:9:6.01:0,6,69	1/1:12,1:18:6.01:92,6,0	1/1:18,6:26:5.89:130,6,0	1/1:21,0:19:23.20:376,23,0	1/1:7,5:16:11.61:487,12,0	0/0:17,0:17:12.26:0,12,368	0/0:9,0:7:5.98:0,6,95	0/0:17,0:17:27.07:0,27,615	0/0:19,0:22:27.09:0,27,617	1/1:8,1:15:9.01:217,9,0	1/1:10,0:14:6.02:87,6,0	0/0:11,0:14:24.06:0,24,528	1/1:21,1:21:7.61:225,8,0	0/1:13,0:13:5.86:98,0,6	1/1:21,0:20:4.37:115,4,0	1/1:7,0:6:6.48:69,6,0	1/1:26,0:23:14.05:168,14,0	1/1:6,0:6:6.02:144,6,0	0/0:3,2:5:0:0,0,0	1/1:16,3:20:2.78:55,3,0	./.	0/0:19,0:18:11.50:0,12,205	1/1:9,1:14:6.49:162,6,0	0/0:6,0:6:3.01:0,3,55
chr10	102266719	.	G	GTC	2870.91	PASS	AB=0.846;AC=33;AF=0.589;AN=56;BaseQRankSum=7.211;DP=527;FS=6.125;HRun=0;HaplotypeScore=85.7857;InbreedingCoeff=0.6475;MQ=63.70;MQ0=14;MQRankSum=-1.073;QD=7.89;ReadPosRankSum=-1.854;VQSLOD=2.5147;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:30,2:27:17.96:163,18,0	0/0:4,0:4:3:0,3,25	0/0:24,0:11:7.88:0,8,68	0/0:26,0:13:17.74:0,18,125	0/0:16,0:16:35.96:0,36,309	1/1:17,0:17:8.84:69,9,0	1/1:2,14:16:3.48:30,3,0	1/1:29,0:29:44.84:370,45,0	1/1:17,1:18:26.99:245,27,0	0/0:16,0:16:32.23:0,32,285	0/0:17,0:17:29.92:0,30,239	0/0:24,0:24:41.94:0,42,353	0/0:15,0:15:41.96:0,42,386	1/1:18,1:18:3.01:35,3,0	1/1:17,0:18:2.93:32,3,0	0/0:6,0:6:15.01:0,15,148	1/1:18,2:18:32.84:278,33,0	0/1:11,0:11:17.93:18,0,138	1/1:13,13:26:44.82:384,45,0	1/1:13,0:14:26.95:228,27,0	1/1:31,0:31:49.20:476,49,0	1/1:19,0:20:35.96:302,36,0	1/1:14,1:14:19.77:148,20,0	1/1:17,0:17:17.93:140,18,0	1/1:16,0:17:6.01:62,6,0	0/1:19,0:19:41.59:42,0,177	0/1:3,18:22:15.68:55,0,16	0/0:15,0:15:35.12:0,35,255
chr10	102266733	.	C	CTCTCTG	5639.20	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=-1.370;DP=559;FS=0.468;HRun=0;HaplotypeScore=110.6785;InbreedingCoeff=0.4686;MQ=55.78;MQ0=22;MQRankSum=-0.084;QD=13.49;ReadPosRankSum=-1.501;VQSLOD=3.5435;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:28:8.15:119,8,0	0/1:8,0:8:30.27:30,0,38	0/0:22,0:9:14.35:0,14,129	0/0:23,0:10:18.06:0,18,243	0/0:17,0:17:39.08:0,39,576	1/1:6,11:17:6.36:123,6,0	1/1:17,0:18:8.98:120,9,0	1/1:24,0:22:42.01:668,42,0	1/1:17,0:18:27.56:579,28,0	0/0:19,0:19:50.47:0,50,652	0/0:19,0:18:36.07:0,36,501	0/0:18,0:19:48.06:0,48,727	0/0:14,0:14:42.14:0,42,753	1/1:9,1:21:3.01:101,3,0	1/1:11,9:22:2.95:105,3,0	0/0:8,0:8:24.02:0,24,357	1/1:16,0:19:33.23:533,33,0	0/1:13,0:13:75.87:76,0,226	1/1:20,0:20:21.03:581,21,0	1/1:16,0:16:14.46:437,14,0	0/1:36,0:36:51.69:728,0,52	1/1:17,0:16:29.87:512,30,0	1/1:21,0:18:13.40:236,13,0	1/1:20,0:21:18.06:314,18,0	1/1:8,12:22:6.02:211,6,0	0/1:22,0:21:99:117,0,383	0/1:22,0:23:42.43:42,0,75	0/1:18,0:18:5.77:6,0,465
chr10	102266986	.	A	AT	8757.12	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-11.892;DP=515;FS=0.000;HRun=9;HaplotypeScore=53.4060;InbreedingCoeff=0.9866;MQ=75.69;MQ0=0;MQRankSum=-3.213;QD=24.53;ReadPosRankSum=3.612;VQSLOD=5.3813;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:63.17:697,63,0	0/0:5,0:5:15:0,15,130	0/0:19,0:16:37.85:0,38,292	0/0:17,0:16:39.58:0,40,318	0/0:28,0:29:83.18:0,83,707	1/1:2,14:17:35.93:379,36,0	1/1:1,17:18:42.11:465,42,0	1/1:3,25:29:75.02:799,75,0	1/1:3,18:21:45.12:498,45,0	0/0:22,0:22:47.98:0,48,417	0/0:15,0:15:44.97:0,45,386	0/0:14,0:14:32.95:0,33,279	0/0:17,0:18:40.99:0,41,341	1/1:1,10:11:27.07:299,27,0	1/1:5,6:11:9.02:100,9,0	0/0:19,0:19:47.96:0,48,417	1/1:3,30:34:78.04:842,78,0	1/1:1,0:10:19.89:99,20,0	1/1:2,15:17:45.10:487,45,0	1/1:3,16:20:44.95:479,45,0	1/1:5,18:24:42.11:465,42,0	1/1:1,21:22:60.16:664,60,0	1/1:5,17:22:48.13:531,48,0	1/1:3,13:16:39.11:431,39,0	1/1:1,13:14:33.09:364,33,0	1/1:4,15:19:42.11:464,42,0	1/1:2,17:19:41.71:464,42,0	1/1:0,7:7:21.06:232,21,0
chr10	102267140	.	GATTATCAATA	G	4838.88	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.773;DP=411;FS=2.643;HRun=0;HaplotypeScore=120.4652;InbreedingCoeff=0.9727;MQ=84.68;MQ0=0;MQRankSum=-10.712;QD=72.22;ReadPosRankSum=-0.278;VQSLOD=4.8836;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:45.15:0,45,2276	0/0:11,0:11:33.11:0,33,1671	0/0:12,0:12:30.10:0,30,1433	0/0:16,0:16:12.96:0,13,1862	0/0:13,0:13:36.12:0,36,1874	0/0:16,0:16:45.15:0,45,2214	0/0:15,0:15:45.14:0,45,2129	1/1:4,11:15:33.11:1087,33,0	0/0:13,0:13:39.13:0,39,1933	0/0:24,0:24:69.24:0,69,3626	0/0:17,0:17:45.15:0,45,2231	0/0:16,0:16:48.16:0,48,2348	0/0:20,0:19:57.20:0,57,2995	0/0:12,0:12:33.11:0,33,1684	0/0:14,0:14:39.13:0,39,1819	0/0:16,0:16:48.16:0,48,2544	0/0:15,0:15:45.15:0,45,2271	0/0:3,0:3:9.03:0,9,477	1/1:3,9:11:27.09:889,27,0	1/1:0,13:13:39.13:1283,39,0	1/1:4,6:10:12.04:394,12,0	0/0:17,0:17:51.18:0,51,2625	0/0:21,0:21:63.22:0,63,3205	0/0:14,0:14:33.11:0,33,1700	0/0:10,0:10:27.07:0,27,1188	0/0:18,0:18:51.18:0,51,2703	1/1:1,16:16:36.12:1185,36,0	0/0:16,0:16:39.13:0,39,2066
chr10	102268410	.	GATGAT	G	348.14	PASS	AB=0.875;AC=2;AF=0.042;AN=48;BaseQRankSum=-0.222;DP=533;FS=1.678;HRun=0;HaplotypeScore=50.3144;InbreedingCoeff=0.1017;MQ=23.81;MQ0=133;MQRankSum=-1.397;QD=11.60;ReadPosRankSum=0.312;VQSLOD=1.9073;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:17:9.03:0,9,222	0/1:6,0:5:0:0,0,0	./.	./.	0/0:34,0:17:9.03:0,9,229	0/0:27,0:7:18.06:0,18,547	0/0:10,0:3:3.01:0,3,91	0/0:8,0:2:6.02:0,6,180	0/0:20,0:8:21.07:0,21,638	0/0:44,0:21:57.20:0,57,1625	0/0:35,0:19:15.05:0,15,440	0/0:21,0:12:17.96:0,18,547	0/0:17,0:12:15.05:0,15,382	0/0:20,0:4:12.04:0,12,364	0/0:13,0:3:9.03:0,9,273	0/0:14,0:12:12.02:0,12,255	./.	0/0:29,0:23:21.03:0,21,518	0/0:20,0:8:24.08:0,24,684	0/0:29,0:19:21.07:0,21,638	0/0:14,0:1:3.01:0,3,91	0/0:25,0:13:24.08:0,24,729	0/0:22,0:11:21.07:0,21,637	0/0:11,0:3:3.01:0,3,91	0/0:13,0:10:24.08:0,24,729	0/1:16,8:10:64.49:421,0,64	0/0:30,0:16:45.11:0,45,1264	./.
chr10	102268954	.	T	TA	1008.37	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-7.120;DP=601;FS=14.266;HRun=9;HaplotypeScore=70.2002;InbreedingCoeff=0.7275;MQ=48.16;MQ0=26;MQRankSum=-2.231;QD=18.33;ReadPosRankSum=-0.242;VQSLOD=2.5133;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:80.94:0,81,698	0/0:12,0:12:26.99:0,27,234	0/1:9,0:4:3.21:3,0,16	0/0:8,0:3:5.34:0,5,28	0/0:34,0:34:74.88:0,75,637	0/0:25,0:25:44.96:0,45,387	0/0:14,0:14:23.97:0,24,208	0/0:22,0:18:44.91:0,45,378	0/0:22,0:22:44.96:0,45,391	0/0:33,0:32:86.97:0,87,755	0/0:30,0:30:65.98:0,66,571	0/0:19,0:19:11.43:0,11,253	0/0:18,0:19:38.03:0,38,318	0/0:19,1:20:2.73:0,3,244	0/0:18,0:18:38.99:0,39,339	0/0:16,0:16:23.99:0,24,208	0/0:22,0:20:53.99:0,54,469	0/0:18,0:17:35.67:0,36,291	0/0:31,1:13:29.95:0,30,260	0/0:33,0:33:89.97:0,90,781	0/0:12,0:11:26.98:0,27,234	0/0:20,0:20:38.98:0,39,338	0/0:20,0:19:41.94:0,42,357	0/0:16,0:16:41.99:0,42,365	0/0:23,0:23:59.91:0,60,513	1/1:7,25:30:66.18:730,66,0	0/0:21,0:21:41.92:0,42,357	1/1:1,13:14:36.10:398,36,0
chr10	102269850	.	G	GACACACAC	2644.86	PASS	AB=0.860;AC=29;AF=0.604;AN=48;BaseQRankSum=2.046;DP=589;FS=1.637;HRun=0;HaplotypeScore=165.3904;InbreedingCoeff=0.4011;MQ=55.23;MQ0=12;MQRankSum=-2.266;QD=6.33;ReadPosRankSum=-2.883;VQSLOD=1.5931;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,1:39:3.48:123,3,0	0/0:3,0:3:3.01:0,3,40	./.	./.	0/0:20,0:20:13.29:0,13,213	1/1:11,0:16:6.02:153,6,0	1/1:39,0:39:30.19:525,30,0	1/1:22,0:22:11.22:78,11,0	./.	0/0:18,0:16:4.54:0,5,147	0/0:7,0:6:3.01:0,3,75	0/0:22,0:22:27.08:0,27,627	0/0:12,0:15:12.04:0,12,280	1/1:15,0:21:2.75:24,3,0	1/1:11,10:24:12.03:431,12,0	0/0:15,0:16:23.89:0,24,412	1/1:12,0:18:6:103,6,0	0/1:26,0:36:69.73:345,0,70	1/1:17,0:16:14.69:136,15,0	0/1:8,0:8:17.69:18,0,69	0/1:31,0:54:54.55:74,0,55	0/1:18,0:18:30.89:108,0,31	./.	0/1:25,0:30:0.48:0,0,1	1/1:6,0:13:0.47:1,0,0	1/1:12,0:22:28.86:397,29,0	1/1:16,0:23:16.30:120,16,0	1/1:9,0:9:12.04:171,12,0
chr10	102270636	.	TC	T	4012.24	PASS	AB=0.870;AC=11;AF=0.196;AN=56;BaseQRankSum=11.782;DP=589;FS=0.809;HRun=2;HaplotypeScore=58.2001;InbreedingCoeff=0.8858;MQ=70.20;MQ0=2;MQRankSum=0.812;QD=30.86;ReadPosRankSum=-3.023;VQSLOD=2.4574;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,1888	0/0:8,0:8:24.07:0,24,341	0/1:17,3:14:21.20:21,0,356	0/0:19,1:15:21.20:0,21,275	0/0:13,0:13:39.13:0,39,584	0/0:15,0:15:45.14:0,45,655	0/0:34,0:34:99:0,99,1481	1/1:1,23:24:63.20:817,63,0	0/0:32,0:32:93.32:0,93,1393	0/0:39,0:39:99:0,117,1751	0/0:14,0:14:42.14:0,42,628	0/0:19,0:19:57.19:0,57,854	0/0:16,0:16:48.16:0,48,711	0/0:14,0:14:42.14:0,42,629	0/0:15,0:15:42.14:0,42,629	0/0:19,0:19:57.19:0,57,851	0/0:25,0:25:75.25:0,75,1123	0/0:19,0:19:57.19:0,57,854	1/1:0,28:28:81.13:993,81,0	1/1:0,17:17:51.17:662,51,0	1/1:0,32:32:93.30:1207,93,0	0/0:15,0:15:39.13:0,39,584	0/0:19,0:19:57.16:0,57,813	0/0:25,0:25:72.23:0,72,1060	0/0:23,0:23:69.23:0,69,1033	0/0:22,0:22:63.21:0,63,944	1/1:0,9:9:24.08:312,24,0	0/0:10,0:10:30.09:0,30,429
chr10	102270828	.	T	TA	424.52	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.977;DP=513;FS=0.965;HRun=8;HaplotypeScore=48.6538;InbreedingCoeff=0.9514;MQ=78.59;MQ0=0;MQRankSum=-1.765;QD=19.30;ReadPosRankSum=1.798;VQSLOD=3.3830;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.04:0,90,823	0/0:4,0:4:11.98:0,12,103	0/0:12,0:13:26.93:0,27,234	0/0:15,0:15:32.70:0,33,271	0/0:24,0:24:69.04:0,69,631	0/0:19,0:19:54.02:0,54,490	0/0:21,0:21:57.46:0,57,512	0/0:31,0:31:78.03:0,78,714	0/0:16,0:16:48.03:0,48,439	0/0:32,0:32:81.02:0,81,734	0/0:17,0:17:48.02:0,48,439	0/0:17,0:17:42:0,42,380	0/0:13,0:13:33.02:0,33,302	0/0:17,0:17:17.81:0,18,333	0/0:11,0:11:30:0,30,270	0/0:19,0:19:51.03:0,51,467	0/0:18,0:18:51.01:0,51,461	1/1:0,22:22:45.13:519,45,0	0/0:22,0:22:60.02:0,60,544	0/0:23,0:23:66.04:0,66,604	0/0:14,0:14:33.01:0,33,302	0/0:13,0:13:33:0,33,298	0/0:17,0:17:51.03:0,51,466	0/0:13,0:13:29.99:0,30,269	0/0:13,0:13:33.02:0,33,302	0/0:28,0:28:72.02:0,72,658	0/0:21,0:21:57.03:0,57,522	0/0:8,0:8:18:0,18,165
chr10	102271025	.	A	AG	895.28	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.173;DP=606;FS=0.750;HRun=4;HaplotypeScore=79.5606;InbreedingCoeff=0.9008;MQ=91.30;MQ0=0;MQRankSum=-3.405;QD=29.84;ReadPosRankSum=-0.994;VQSLOD=3.3546;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:99:0,102,1130	0/0:10,0:10:27.04:0,27,284	0/0:26,0:26:59.98:0,60,605	0/0:22,0:22:56.32:0,56,624	0/0:12,0:12:36.09:0,36,397	0/0:23,0:23:60.17:0,60,680	0/0:23,0:23:66.15:0,66,722	0/0:28,0:28:63.14:0,63,693	0/0:19,0:19:57.15:0,57,636	0/0:23,0:23:66.16:0,66,729	0/0:15,0:15:45.11:0,45,501	0/0:25,0:25:69.18:0,69,774	0/0:14,0:14:42.12:0,42,476	0/0:32,0:32:90.24:0,90,1010	0/0:20,0:20:60.17:0,60,680	0/0:16,0:16:48.09:0,48,515	0/0:36,0:36:99:0,99,1099	0/0:33,0:33:96.24:0,96,1074	0/0:23,0:23:63.16:0,63,703	0/0:14,0:14:36.10:0,36,408	0/0:34,0:34:93.27:0,93,1055	0/0:14,0:14:42.12:0,42,475	0/0:20,0:20:57.15:0,57,636	0/0:30,0:30:90.24:0,90,1010	0/0:10,0:10:30.09:0,30,339	1/1:4,22:26:4.16:835,4,0	0/0:19,0:19:54.09:0,54,575	1/1:0,4:4:12.04:164,12,0
chr10	102271434	.	AAAG	A	1712.46	PASS	AB=0.778;AC=5;AF=0.089;AN=56;BaseQRankSum=4.796;DP=586;FS=92.390;HRun=0;HaplotypeScore=145.6042;InbreedingCoeff=-0.1093;MQ=64.48;MQ0=1;MQRankSum=-8.546;QD=13.48;ReadPosRankSum=5.076;VQSLOD=-0.4606;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,2:35:93.23:0,93,1952	0/0:2,3:5:3.01:0,3,74	0/0:18,0:18:48.16:0,48,1041	0/0:22,0:22:63.01:0,63,1384	0/0:25,8:33:31.67:0,32,456	0/0:20,5:25:30.66:0,31,1012	0/0:15,4:19:45.61:0,46,1036	0/1:14,9:23:99:348,0,946	0/0:6,5:11:18.46:0,18,368	0/1:26,13:39:99:684,0,1373	0/0:7,4:11:20.70:0,21,360	0/0:13,3:16:36.59:0,37,837	0/0:13,6:19:36.09:0,36,723	0/0:16,3:19:48.16:0,48,1120	0/0:13,5:18:36.12:0,36,864	0/0:14,2:16:42.10:0,42,911	0/0:18,1:19:50.49:0,50,1022	0/1:14,2:16:51.58:52,0,783	0/0:22,1:22:10.58:0,11,1314	0/0:17,4:21:33.93:0,34,585	0/0:15,0:15:39.60:0,40,894	0/0:19,12:31:44.43:0,44,943	0/0:19,4:23:20.16:0,20,1037	0/0:23,0:23:45.11:0,45,921	0/0:16,3:19:33.22:0,33,756	0/1:25,13:38:99:624,0,1285	0/0:13,5:18:11.48:0,11,586	0/1:8,3:11:99:122,0,478
chr10	102273954	.	GAA	G	3609.31	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-1.541;DP=438;FS=0.939;HRun=10;HaplotypeScore=64.0630;InbreedingCoeff=0.9209;MQ=62.54;MQ0=1;MQRankSum=1.794;QD=21.36;ReadPosRankSum=2.110;VQSLOD=2.8535;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:13:36.07:0,36,515	0/0:10,0:10:18.06:0,18,286	0/0:25,0:15:29.54:0,30,305	0/1:18,0:15:5.31:5,0,178	0/0:20,0:20:57.19:0,57,897	1/1:1,14:15:36.09:401,36,0	1/1:3,7:10:24.06:264,24,0	0/0:3,0:23:53.66:0,54,231	1/1:0,15:15:33.09:368,33,0	0/0:19,0:19:36.10:0,36,522	0/0:21,0:22:57.02:0,57,837	0/0:8,0:8:21.07:0,21,333	0/0:12,0:12:33.11:0,33,520	1/1:1,10:11:27.07:301,27,0	1/1:2,16:18:48.13:534,48,0	0/0:13,0:13:39.06:0,39,563	1/1:1,16:17:36.09:401,36,0	0/0:12,0:12:27.07:0,27,396	0/0:2,0:18:37.31:0,37,129	0/0:3,0:19:39.65:0,40,137	0/0:2,0:7:9.98:0,10,34	1/1:3,15:18:39.09:433,39,0	1/1:2,9:11:17.67:200,18,0	1/1:4,6:10:15.03:167,15,0	1/1:4,21:25:48.11:535,48,0	0/0:3,0:18:43.91:0,44,213	0/0:4,0:22:40.05:0,40,152	0/0:1,0:7:9.98:0,10,34
chr10	102274061	.	TACACACACAC	T	884.46	PASS	AB=1.000;AC=13;AF=0.271;AN=48;BaseQRankSum=3.432;DP=397;FS=10.672;HRun=0;HaplotypeScore=112.8679;InbreedingCoeff=0.5185;MQ=56.95;MQ0=14;MQRankSum=-3.946;QD=7.37;ReadPosRankSum=-1.956;VQSLOD=1.2242;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:19:6.60:75,7,0	0/0:5,0:8:15.05:0,15,582	./.	./.	0/0:14,0:15:18.06:0,18,662	0/0:14,0:14:11.71:0,12,187	0/0:9,0:9:3.48:0,3,70	1/1:19,0:19:1.33:38,1,0	./.	0/0:8,0:8:9.03:0,9,219	0/0:7,0:7:3.01:0,3,121	0/0:11,0:11:15.05:0,15,622	0/0:6,0:6:3.01:0,3,148	0/0:6,0:8:15.05:0,15,422	0/0:8,0:10:6.02:0,6,101	0/1:15,0:15:12.80:13,0,498	0/0:15,0:16:11.63:0,12,196	0/0:9,0:12:16.58:0,17,249	1/1:13,4:18:12.04:253,12,0	./.	0/0:25,0:25:2.98:0,3,22	0/0:10,0:12:8.90:0,9,267	0/0:9,0:10:2.81:0,3,41	0/0:12,0:19:24.04:0,24,549	0/0:6,0:6:6.02:0,6,111	1/1:13,1:13:3.01:88,3,0	1/1:13,5:20:17.89:474,18,0	1/1:10,3:12:3.48:89,3,0
chr10	102274215	.	GT	G	1090.39	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.639;DP=539;FS=0.595;HRun=7;HaplotypeScore=60.4891;InbreedingCoeff=0.9840;MQ=73.61;MQ0=0;MQRankSum=-0.562;QD=25.36;ReadPosRankSum=1.027;VQSLOD=4.1749;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:59.89:0,60,674	0/0:10,0:10:30.10:0,30,377	0/0:14,0:14:14.12:0,14,459	0/0:15,0:15:39.12:0,39,467	0/0:27,0:27:75.21:0,75,905	0/0:26,0:26:69.22:0,69,867	0/0:8,0:8:20.97:0,21,229	0/0:32,0:32:87.27:0,87,1080	0/0:18,0:18:45.10:0,45,548	0/0:29,0:29:75.24:0,75,940	0/0:31,0:31:90.24:0,90,1094	0/0:9,0:9:27.04:0,27,322	0/0:11,0:11:33.09:0,33,402	0/0:7,0:7:21.07:0,21,264	0/0:10,0:10:27.09:0,27,340	0/0:18,0:18:48.15:0,48,603	0/0:18,0:18:51.14:0,51,615	0/0:19,0:18:48.15:0,48,603	0/0:19,0:19:51.15:0,51,629	0/0:25,0:25:69.21:0,69,855	0/0:14,0:14:30.10:0,30,377	0/0:21,0:21:60.19:0,60,755	0/0:11,0:11:33.09:0,33,394	0/0:19,0:19:48.15:0,48,601	0/0:35,0:35:99:0,102,1255	1/1:1,26:27:43.44:753,43,0	0/0:29,0:28:84.24:0,84,1041	1/1:1,15:16:45.10:459,45,0
chr10	102276221	.	TG	T	1092.21	PASS	AB=0.857;AC=17;AF=0.315;AN=54;BaseQRankSum=9.653;DP=1115;FS=62.930;HRun=1;HaplotypeScore=368.1637;InbreedingCoeff=-0.4719;MQ=30.98;MQ0=28;MQRankSum=-5.051;QD=1.54;ReadPosRankSum=5.577;VQSLOD=-0.7002;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:48,8:32:42.12:42,0,657	0/1:14,1:13:22.25:22,0,287	0/0:26,1:4:6.36:0,6,64	./.	0/0:17,8:25:8.50:0,8,441	0/1:41,10:29:33.41:33,0,436	0/0:42,4:43:57.80:0,58,1256	0/0:34,14:23:10.94:0,11,603	0/1:37,13:47:99:140,0,941	0/1:46,5:42:99:157,0,1165	0/1:27,5:28:59.66:60,0,339	0/1:32,8:35:47.06:47,0,618	0/1:42,12:48:76.46:76,0,1054	0/1:35,10:44:10.69:11,0,890	0/1:38,20:50:99:129,0,800	0/1:39,9:46:91.92:92,0,1138	0/0:36,2:38:38.15:0,38,1051	0/0:24,0:23:50.92:0,51,695	0/1:19,8:10:79.13:79,0,152	0/1:34,7:37:59.99:60,0,802	0/0:64,2:42:68.89:0,69,901	0/1:42,4:37:24.50:24,0,709	0/1:25,4:25:76.66:77,0,398	0/0:53,5:55:44.78:0,45,1109	0/1:28,1:20:39.71:40,0,450	0/1:31,4:25:99:158,0,603	0/0:34,4:35:36.16:0,36,817	0/0:10,0:9:18.02:0,18,229
chr10	102276231	.	A	ATAC	1351.27	PASS	AB=0.987;AC=28;AF=0.560;AN=50;BaseQRankSum=3.959;DP=501;FS=15.902;HRun=0;HaplotypeScore=171.4057;InbreedingCoeff=-0.6975;MQ=32.67;MQ0=5;MQRankSum=-4.047;QD=2.85;ReadPosRankSum=9.847;VQSLOD=0.3358;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:14:53.90:63,0,54	1/1:4,0:2:2.83:19,3,0	./.	./.	0/1:11,0:11:36.63:44,0,37	0/1:19,0:7:7.69:8,0,59	0/1:24,0:24:99:101,0,221	0/1:14,4:14:52.50:53,0,139	0/1:21,1:20:34.10:34,0,117	0/1:18,0:13:15.77:16,0,99	0/1:11,0:11:4.06:4,0,17	0/1:11,0:10:11.67:48,0,12	0/1:21,0:19:9.61:10,0,154	0/1:20,0:20:80.15:104,0,80	0/1:22,0:19:53.36:53,0,84	0/1:20,0:20:27.37:27,0,118	0/1:26,0:26:93.46:151,0,93	1/1:13,0:13:20.73:123,21,0	./.	0/1:17,0:16:49.98:74,0,50	0/1:38,0:20:40.18:40,0,148	0/1:16,0:16:48.93:49,0,56	1/1:15,0:13:8.87:57,9,0	0/1:45,0:44:84.36:175,0,84	0/1:15,0:10:17.84:76,0,18	0/1:14,1:7:23.99:54,0,24	0/1:19,0:18:9.94:106,0,10	0/1:2,0:2:0:0,0,0
chr10	102277144	.	AG	A	605.77	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.728;DP=601;FS=0.877;HRun=2;HaplotypeScore=86.0898;InbreedingCoeff=0.9841;MQ=79.28;MQ0=1;MQRankSum=-0.009;QD=31.88;ReadPosRankSum=-0.277;VQSLOD=3.2275;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,1863	0/0:12,0:12:36.12:0,36,535	0/0:30,0:28:81.22:0,81,1124	0/0:25,0:24:42.97:0,43,833	0/0:17,0:17:51.17:0,51,763	0/0:23,0:23:69.23:0,69,1034	0/0:20,0:20:60.20:0,60,897	0/0:18,0:18:51.11:0,51,702	0/0:22,0:22:66.20:0,66,948	0/0:19,0:19:54.17:0,54,775	0/0:6,0:6:18.06:0,18,270	0/0:18,0:18:54.17:0,54,783	0/0:19,0:19:54.18:0,54,790	0/0:20,0:20:60.19:0,60,879	0/0:16,0:16:45.14:0,45,654	0/0:19,0:19:57.17:0,57,832	0/0:21,0:21:63.19:0,63,921	1/1:1,18:19:54.18:701,54,0	0/0:18,0:18:53.86:0,54,747	0/0:29,0:29:84.26:0,84,1218	0/0:30,0:30:87.28:0,87,1277	0/0:24,0:24:72.18:0,72,1043	0/0:25,0:25:72.23:0,72,1058	0/0:26,0:26:78.25:0,78,1146	0/0:22,0:22:66.22:0,66,987	0/0:27,0:27:81.27:0,81,1214	0/0:28,0:28:84.27:0,84,1237	0/0:6,0:6:18.06:0,18,269
chr10	102278658	.	CAA	C	2708.95	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=0.962;DP=399;FS=4.954;HRun=11;HaplotypeScore=74.2588;InbreedingCoeff=0.9430;MQ=64.08;MQ0=3;MQRankSum=0.943;QD=20.52;ReadPosRankSum=2.658;VQSLOD=3.1469;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:35:90.16:0,90,1293	0/0:9,0:10:21.07:0,21,306	0/0:6,0:6:14.48:0,14,147	0/0:7,0:3:9.01:0,9,94	0/0:20,0:20:54.18:0,54,831	1/1:5,20:25:45.10:479,45,0	1/1:1,9:11:24.04:252,24,0	0/0:7,0:22:40.41:0,40,150	1/1:1,9:10:27:273,27,0	0/0:15,0:18:41.62:0,42,589	0/0:16,0:19:53.61:0,54,730	0/0:5,0:5:15.01:0,15,204	0/0:11,0:11:21.02:0,21,297	1/1:1,8:9:15.03:160,15,0	1/1:2,10:12:27.06:287,27,0	0/0:8,0:8:21.03:0,21,297	1/1:4,19:23:37.33:555,37,0	0/0:14,0:14:38.93:0,39,332	0/0:2,0:17:15.21:0,15,140	0/0:2,0:12:25.43:0,25,98	0/0:0,0:13:22.46:0,22,77	1/1:0,2:2:3.01:32,3,0	1/1:1,11:12:27.07:287,27,0	1/1:1,3:4:9.02:96,9,0	1/1:1,22:23:42.04:501,42,0	0/0:1,0:13:26.51:0,27,89	0/0:3,0:20:42.17:0,42,144	0/0:2,0:12:24.95:0,25,86
chr10	102280208	.	G	GGTGTGTGTGT	4451.59	PASS	AB=0.985;AC=29;AF=0.604;AN=48;BaseQRankSum=1.849;DP=491;FS=6.694;HRun=0;HaplotypeScore=142.8256;InbreedingCoeff=0.5406;MQ=55.08;MQ0=7;MQRankSum=-6.446;QD=14.84;ReadPosRankSum=-0.894;VQSLOD=3.0494;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:6:15.05:0,15,415	0/1:34,0:22:15.01:15,0,34	0/0:22,0:14:1.93:0,2,217	0/0:18,0:17:24.01:0,24,570	./.	1/1:17,0:17:3.01:94,3,0	1/1:40,0:36:27.04:516,27,0	1/1:14,0:12:12.02:321,12,0	0/0:23,0:23:39.09:0,39,1046	0/0:21,0:20:24.08:0,24,682	0/0:15,0:14:26.81:0,27,662	0/0:18,0:18:38.87:0,39,1050	1/1:11,0:11:6:119,6,0	1/1:23,0:23:6.02:182,6,0	0/0:10,0:10:29.77:0,30,765	0/1:20,0:17:43.77:355,0,44	1/1:10,0:10:3.90:133,4,0	1/1:15,4:20:25.60:714,26,0	1/1:19,0:19:15.04:362,15,0	1/1:11,0:12:3.01:50,3,0	1/1:17,0:17:18.02:240,18,0	1/1:13,0:12:3.01:94,3,0	./.	./.	0/1:20,0:20:82.63:291,0,83	1/1:16,0:18:30.10:870,30,0	1/1:5,0:5:6.02:96,6,0
chr10	102280230	.	TGA	T	57.16	PASS	AB=0.986;AC=8;AF=0.211;AN=38;BaseQRankSum=1.890;DP=440;FS=2.436;HRun=0;HaplotypeScore=81.0776;InbreedingCoeff=0.1531;MQ=43.59;MQ0=19;MQRankSum=0.279;QD=0.46;ReadPosRankSum=1.320;VQSLOD=1.5566;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:11:0:0,0,0	0/0:6,0:6:9.01:0,9,96	./.	./.	0/0:17,0:16:17.01:0,17,131	0/0:20,0:19:0:0,0,0	0/0:15,0:15:0:0,0,0	0/0:25,0:20:5.39:0,5,14	0/0:17,0:12:2.92:0,3,17	0/0:33,0:33:15.85:0,16,514	0/0:15,0:14:14.62:0,15,166	0/0:17,3:19:2.50:0,3,335	0/1:19,2:21:89.43:89,0,150	./.	./.	0/1:18,0:18:37.88:38,0,263	0/0:17,0:11:3.89:0,4,32	0/0:8,0:6:0:0,0,0	0/1:19,0:16:1.03:6,0,1	0/1:21,0:18:0:0,0,0	./.	1/1:15,0:15:0.89:2,1,0	./.	./.	./.	0/0:12,0:11:5.91:0,6,62	0/1:18,0:15:10.67:12,0,11	./.
chr10	102280255	.	GAGAGAGAGAGACAGAC	G	627.32	PASS	AB=1.000;AC=15;AF=0.341;AN=44;BaseQRankSum=2.945;DP=413;FS=2.930;HRun=0;HaplotypeScore=148.6579;InbreedingCoeff=0.4310;MQ=46.53;MQ0=18;MQRankSum=-3.109;QD=4.98;ReadPosRankSum=-4.105;VQSLOD=1.3872;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:9:5.81:63,6,0	0/0:9,0:9:27.09:0,27,869	./.	./.	0/0:21,0:20:39.12:0,39,1499	1/1:10,0:10:8.47:140,8,0	1/1:13,0:12:0.06:45,0,0	0/1:26,0:23:30.96:31,0,153	0/0:18,0:15:2.96:0,3,19	0/0:37,0:37:99:0,105,4403	0/0:17,0:17:39.11:0,39,1709	0/0:26,0:26:63.20:0,63,2920	0/0:23,0:23:50.98:0,51,1924	./.	1/1:13,0:13:9:99,9,0	0/0:17,0:17:48.16:0,48,2222	0/1:15,0:10:99:128,0,146	0/1:6,0:4:12.08:68,0,12	0/0:14,0:12:11.87:0,12,52	0/0:17,0:15:3.01:0,3,36	./.	1/1:15,0:15:3.01:123,3,0	./.	1/1:17,0:17:5.82:77,6,0	./.	0/0:8,0:7:5.70:0,6,297	0/0:19,0:16:20.84:0,21,214	0/0:5,0:5:0.47:0,0,1
chr10	102280257	.	GAGAGAGAGACAGAC	G	665.18	PASS	AB=0.979;AC=13;AF=0.295;AN=44;BaseQRankSum=1.970;DP=419;FS=8.534;HRun=0;HaplotypeScore=140.4026;InbreedingCoeff=0.5090;MQ=46.68;MQ0=19;MQRankSum=-2.102;QD=6.52;ReadPosRankSum=-3.797;VQSLOD=0.8483;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:10:6.02:106,6,0	0/0:9,0:9:27.09:0,27,794	./.	./.	0/0:22,0:21:42.14:0,42,1377	1/1:9,1:10:8.70:136,9,0	0/1:14,0:13:0.02:45,0,0	0/0:26,0:23:16.98:0,17,138	0/0:5,14:16:2.96:0,3,19	0/0:37,0:37:99:0,105,3763	0/0:17,0:17:39.09:0,39,1515	0/0:25,0:25:62.34:0,62,2521	0/0:22,0:22:50.79:0,51,1627	./.	1/1:11,2:13:9.03:150,9,0	0/0:17,0:17:48.16:0,48,1943	0/1:14,1:10:99:129,0,103	0/1:6,0:4:11.98:68,0,12	0/0:13,0:11:5.56:0,6,19	0/0:19,0:17:2.96:0,3,20	./.	1/1:2,13:15:3.01:98,3,0	./.	1/1:17,0:17:5.80:77,6,0	./.	0/0:8,0:7:8.34:0,8,262	0/0:20,0:17:19.39:0,19,135	0/0:0,0:5:0.47:0,0,1
chr10	102280259	.	GAGAGAGAC	G	833.91	PASS	AB=1.000;AC=23;AF=0.523;AN=44;BaseQRankSum=7.281;DP=418;FS=5.787;HRun=0;HaplotypeScore=111.2829;InbreedingCoeff=0.4857;MQ=46.87;MQ0=19;MQRankSum=-5.608;QD=4.79;ReadPosRankSum=-3.971;VQSLOD=-0.1775;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:10:5.84:42,6,0	0/0:9,0:9:27:0,27,438	./.	./.	0/0:20,0:20:26.03:0,26,658	1/1:11,0:11:11.61:93,12,0	1/1:15,0:14:5.29:47,5,0	1/1:25,0:22:58.82:379,59,0	0/0:19,0:16:2.94:0,3,18	0/0:36,0:36:99:0,105,2203	0/0:17,0:17:39.04:0,39,792	0/0:25,0:25:60.04:0,60,1423	0/0:22,0:22:12.71:0,13,813	./.	1/1:14,0:14:11.99:100,12,0	0/0:17,0:17:48.09:0,48,1165	0/1:15,0:10:50.97:51,0,76	1/1:6,0:4:5.80:38,6,0	1/1:12,0:10:4.59:66,5,0	0/0:5,14:17:2.94:0,3,18	./.	1/1:15,0:15:3.01:39,3,0	./.	1/1:16,0:16:4.93:38,5,0	./.	0/1:8,0:7:48.95:49,0,157	0/1:20,0:17:35.97:36,0,49	1/1:5,0:5:2.96:19,3,0
chr10	102280261	.	GAGAGACAGACAGAC	G	1222.02	PASS	AB=1.000;AC=23;AF=0.523;AN=44;BaseQRankSum=7.633;DP=426;FS=6.894;HRun=0;HaplotypeScore=140.9547;InbreedingCoeff=0.5318;MQ=46.71;MQ0=20;MQRankSum=-6.688;QD=6.83;ReadPosRankSum=-5.926;VQSLOD=-0.2136;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:4,8:10:6.02:150,6,0	0/0:9,0:9:27.08:0,27,880	./.	./.	0/0:20,0:20:41.35:0,41,1462	1/1:11,0:12:11.76:94,12,0	1/1:15,0:14:2.96:43,3,0	1/1:24,0:21:31.50:263,31,0	0/0:19,0:16:0:0,0,0	0/0:36,0:36:93.24:0,93,3569	0/0:17,0:17:36.12:0,36,1575	0/0:24,0:24:39.52:0,40,2445	0/0:21,0:21:24.84:0,25,1533	./.	1/1:13,0:14:14.99:127,15,0	0/0:17,0:17:48.15:0,48,1862	0/1:15,0:10:64.85:65,0,67	1/1:6,0:4:9.03:173,9,0	1/1:14,0:12:35.22:234,35,0	0/0:19,0:17:0:0,0,1	./.	1/1:15,0:15:3.01:73,3,0	./.	1/1:16,0:16:5.71:41,6,0	./.	0/1:8,0:7:71.84:72,0,225	0/1:22,0:19:12.37:12,0,26	1/1:6,0:6:5.88:36,6,0
chr10	102281977	.	AT	A	8814.38	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=12.416;DP=685;FS=2.463;HRun=3;HaplotypeScore=94.4714;InbreedingCoeff=0.9977;MQ=93.49;MQ0=0;MQRankSum=-7.982;QD=32.77;ReadPosRankSum=5.654;VQSLOD=4.7628;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1581	0/0:12,0:12:36.09:0,36,497	0/0:27,0:27:74.04:0,74,1004	0/0:31,0:31:82.24:0,82,1082	0/0:30,0:30:90.30:0,90,1294	1/1:0,21:21:57.18:707,57,0	1/1:0,19:19:51.16:632,51,0	0/0:30,0:30:90.30:0,90,1296	1/1:0,24:24:63.20:781,63,0	0/0:34,0:34:96.29:0,96,1347	0/0:21,0:21:60.20:0,60,864	0/0:24,0:24:66.18:0,66,897	0/0:25,0:25:75.24:0,75,1062	1/1:2,21:23:54.17:670,54,0	1/1:0,29:29:78.25:967,78,0	0/0:23,0:23:69.23:0,69,993	1/1:0,30:30:81.25:1004,81,0	1/1:1,23:24:57.18:707,57,0	0/0:20,0:20:60.20:0,60,864	0/0:31,0:31:90.28:0,90,1259	0/0:17,0:17:51.17:0,51,734	1/1:0,17:17:48.15:595,48,0	1/1:3,25:28:72.23:892,72,0	1/1:1,34:35:96.30:1190,96,0	1/1:0,19:19:54.17:670,54,0	0/0:17,0:17:51.16:0,51,718	0/0:28,0:27:84.28:0,84,1208	0/0:6,0:6:15.05:0,15,216
chr10	102282555	.	C	CTT	2978.33	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-2.308;DP=552;FS=1.815;HRun=10;HaplotypeScore=74.5253;InbreedingCoeff=0.9308;MQ=79.07;MQ0=0;MQRankSum=-2.710;QD=20.26;ReadPosRankSum=-1.231;VQSLOD=2.6191;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:76.70:0,77,755	0/0:6,0:7:17.77:0,18,164	0/0:30,0:30:6.30:0,6,255	0/0:10,0:12:3.88:0,4,56	0/0:22,0:22:60.10:0,60,595	0/0:24,0:24:66.12:0,66,671	0/0:22,0:22:62.86:0,63,614	1/1:11,21:33:63.27:877,63,0	0/0:16,0:16:41.28:0,41,419	0/0:22,0:22:54.06:0,54,548	0/0:12,0:14:29.27:0,29,319	0/0:18,0:18:39.04:0,39,396	0/0:13,0:13:33.05:0,33,334	0/0:15,0:15:37.61:0,38,363	0/0:21,0:22:53.83:0,54,601	0/0:14,0:14:30.02:0,30,305	0/0:18,0:20:32.50:0,33,362	0/0:22,0:22:36.31:0,36,545	1/1:9,12:23:41.56:511,42,0	1/1:4,14:20:46.95:586,47,0	1/1:2,14:18:30.98:433,31,0	0/0:15,0:15:36.07:0,36,364	0/0:18,0:18:48.06:0,48,480	0/0:23,0:23:57.09:0,57,579	0/0:21,0:23:44.49:0,44,480	1/1:6,2:19:8:162,8,0	1/1:0,14:15:35.91:505,36,0	1/1:3,0:17:9.68:96,10,0
chr10	102282965	.	TTTA	T	1228.32	PASS	AB=1.000;AC=27;AF=0.500;AN=54;BaseQRankSum=1.752;DP=299;FS=6.563;HRun=0;HaplotypeScore=66.6570;InbreedingCoeff=0.3609;MQ=61.03;MQ0=9;MQRankSum=-1.574;QD=5.79;ReadPosRankSum=2.153;VQSLOD=1.2690;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:11:8.85:111,9,0	0/0:8,0:8:17.95:0,18,207	0/0:14,0:6:3.81:0,4,24	0/0:18,0:5:2.29:0,2,57	0/0:10,0:10:26.91:0,27,338	1/1:15,0:15:14.85:105,15,0	1/1:4,0:4:5.93:40,6,0	0/1:42,0:39:33.43:33,0,55	1/1:6,0:6:3.01:43,3,0	0/0:10,0:10:26.10:0,26,374	0/0:9,0:9:11.87:0,12,106	0/0:6,0:6:6.01:0,6,80	0/0:4,0:4:8.99:0,9,112	1/1:3,0:3:3:25,3,0	1/1:6,0:6:17.74:115,18,0	0/0:3,0:3:2.60:0,3,10	1/1:24,2:24:51.16:414,51,0	0/1:17,0:11:30.95:31,0,46	0/1:17,0:15:8.82:68,0,9	1/1:15,0:15:7.46:34,7,0	1/1:6,0:5:1.61:6,2,0	0/0:1,0:1:0:0,0,0	1/1:7,1:8:5.58:63,6,0	0/0:1,0:1:0.47:0,0,1	1/1:11,1:11:32.79:264,33,0	0/1:7,0:6:29.12:29,0,29	0/1:16,0:15:10.60:17,0,11	./.
chr10	102282968	.	A	AT	1261.17	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=4.486;DP=299;FS=1.236;HRun=9;HaplotypeScore=61.7445;InbreedingCoeff=0.6516;MQ=60.62;MQ0=10;MQRankSum=-6.485;QD=9.93;ReadPosRankSum=-1.028;VQSLOD=1.9982;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:24.01:0,24,263	0/0:7,0:7:21.07:0,21,257	0/0:14,0:6:11.26:0,11,115	0/0:18,0:5:8.46:0,8,66	0/0:10,0:10:27.07:0,27,317	0/0:14,0:14:10.45:0,10,75	0/1:5,0:5:16.61:17,0,52	1/1:28,10:37:76.51:720,77,0	0/0:4,0:4:8.06:0,8,80	0/0:10,0:10:30.09:0,30,361	0/0:8,0:8:18.04:0,18,205	0/0:6,0:6:15.04:0,15,168	0/0:4,0:4:9.03:0,9,112	0/0:3,0:3:6.02:0,6,69	0/0:6,0:6:15.01:0,15,110	0/0:3,0:3:6.02:0,6,74	0/0:26,0:24:23.61:0,24,521	1/1:16,0:10:1.97:8,2,0	1/1:17,2:16:27.41:215,27,0	1/1:8,1:15:21.57:155,22,0	1/1:6,0:5:8.99:83,9,0	0/0:2,0:2:0:0,0,0	0/0:8,0:8:11.14:0,11,93	0/1:1,0:1:0:0,0,0	0/0:13,0:12:32.44:0,32,315	0/1:9,0:8:4.10:4,0,29	1/1:15,1:15:22.63:227,23,0	./.
chr10	102282970	.	TA	T	1103.75	PASS	AB=0.818;AC=13;AF=0.241;AN=54;BaseQRankSum=5.243;DP=294;FS=1.151;HRun=1;HaplotypeScore=61.9849;InbreedingCoeff=0.6921;MQ=60.59;MQ0=10;MQRankSum=-7.293;QD=9.68;ReadPosRankSum=-0.173;VQSLOD=1.1274;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,1:13:6.87:0,7,213	0/0:7,0:7:21.07:0,21,326	0/0:14,0:6:4.25:0,4,108	0/0:18,0:5:6.66:0,7,69	0/0:10,0:10:30.03:0,30,422	0/0:14,0:14:14.87:0,15,109	0/0:5,0:5:8.91:0,9,65	1/1:25,12:36:76.40:515,76,0	0/0:6,0:6:6.49:0,6,86	0/0:10,0:10:30.10:0,30,469	0/0:8,0:8:21.06:0,21,297	0/0:6,0:6:15.04:0,15,200	0/0:3,0:3:9.03:0,9,144	0/0:2,0:2:5.97:0,6,62	0/0:6,0:6:14.11:0,14,109	0/0:4,0:4:6.02:0,6,90	0/0:26,0:24:15:0,15,385	1/1:16,0:10:15.12:116,15,0	1/1:11,7:16:36.46:224,36,0	1/1:7,4:11:18.55:113,19,0	1/1:3,2:5:8.95:67,9,0	0/0:2,0:2:2.80:0,3,13	0/0:9,0:9:14.19:0,14,121	0/0:1,0:1:0:0,0,0	0/0:13,0:12:29.67:0,30,221	0/1:7,0:8:34.23:48,0,34	1/1:6,7:13:30.01:196,30,0	./.
chr10	102282973	.	TA	T	1218.08	PASS	AB=0.959;AC=17;AF=0.315;AN=54;BaseQRankSum=5.590;DP=295;FS=4.342;HRun=1;HaplotypeScore=60.4568;InbreedingCoeff=0.4829;MQ=58.40;MQ0=10;MQRankSum=-6.741;QD=6.55;ReadPosRankSum=-0.983;VQSLOD=0.2062;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:14:15.61:16,0,135	0/0:6,0:6:18.06:0,18,285	0/1:13,0:5:5.54:6,0,73	0/1:18,1:5:15.28:15,0,56	0/0:10,0:10:30.10:0,30,466	0/0:14,0:14:14.67:0,15,89	0/0:6,0:6:8.85:0,9,56	1/1:23,15:36:70.90:548,71,0	0/0:6,0:6:9.45:0,9,88	0/0:10,0:10:30.09:0,30,448	0/0:7,0:7:18.05:0,18,253	0/0:4,0:4:9.01:0,9,116	0/0:3,0:3:9.03:0,9,143	0/0:2,0:2:5.95:0,6,60	0/0:6,0:6:15.33:0,15,75	0/0:4,0:4:9.02:0,9,110	0/1:27,0:25:10.23:10,0,225	1/1:16,0:10:14.62:122,15,0	1/1:11,6:15:32.94:245,33,0	1/1:6,4:11:18.57:108,19,0	1/1:3,2:4:5.96:44,6,0	0/0:5,0:5:9.89:0,10,95	0/0:9,0:9:9.31:0,9,89	0/0:1,0:1:0:0,0,0	0/0:13,0:12:29.47:0,29,187	0/1:9,2:9:30.11:83,0,30	1/1:6,6:11:27.34:201,27,0	./.
chr10	102282975	.	TTA	T	2382.58	PASS	AB=0.944;AC=31;AF=0.574;AN=54;BaseQRankSum=3.316;DP=293;FS=6.004;HRun=0;HaplotypeScore=60.3608;InbreedingCoeff=0.5783;MQ=63.31;MQ0=10;MQRankSum=-3.244;QD=11.19;ReadPosRankSum=0.314;VQSLOD=2.2905;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:14:26.68:177,27,0	0/0:6,0:6:17.95:0,18,183	0/0:14,0:6:4.75:0,5,62	0/0:20,0:6:4.92:0,5,62	0/0:10,0:10:28.90:0,29,340	1/1:1,13:14:14.54:187,15,0	1/1:1,5:6:8.39:98,8,0	1/1:38,0:35:27.34:183,27,0	1/1:2,3:5:5.99:50,6,0	0/0:9,0:9:26.11:0,26,327	0/0:7,0:7:14.79:0,15,109	0/0:4,0:4:8.96:0,9,105	0/0:3,0:3:8.98:0,9,90	1/1:2,0:2:3:25,3,0	1/1:3,3:6:17.98:241,18,0	0/0:3,0:3:2.50:0,2,17	1/1:20,7:25:67.56:680,68,0	0/1:15,0:9:23.48:56,0,23	1/1:19,0:16:28.85:141,29,0	1/1:11,0:11:14.34:68,14,0	1/1:5,0:4:1.61:6,2,0	0/1:4,1:5:9.26:29,0,9	1/1:1,8:9:11.85:114,12,0	0/0:0,1:1:0:0,0,0	1/1:7,6:12:32.55:385,33,0	0/1:11,0:9:8.68:65,0,9	1/1:12,0:11:9.38:60,9,0	./.
chr10	102282976	.	TA	T	2283.65	PASS	AB=0.875;AC=32;AF=0.593;AN=54;BaseQRankSum=5.996;DP=294;FS=4.015;HRun=1;HaplotypeScore=58.5894;InbreedingCoeff=0.6460;MQ=64.74;MQ0=10;MQRankSum=-2.854;QD=10.87;ReadPosRankSum=1.353;VQSLOD=1.8618;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:14:32.02:246,32,0	0/0:6,0:6:17.84:0,18,157	0/0:15,0:6:7.02:0,7,63	0/0:22,0:7:0.30:0,0,46	0/0:10,0:10:28.65:0,29,272	1/1:14,0:14:13.26:115,13,0	1/1:6,0:6:6.90:59,7,0	1/1:37,1:35:65.59:339,66,0	1/1:4,0:4:5.33:28,5,0	0/0:10,0:10:25.41:0,25,254	0/0:7,0:7:14.73:0,15,99	0/0:4,0:4:9.01:0,9,90	0/0:3,0:3:8.96:0,9,68	1/1:1,0:1:3:25,3,0	1/1:6,0:6:17.94:157,18,0	0/0:3,0:3:5.89:0,6,39	1/1:26,1:25:62.86:543,63,0	1/1:15,0:9:15.24:105,15,0	1/1:19,0:16:34.26:186,34,0	1/1:11,0:11:17.19:75,17,0	1/1:5,0:4:1.61:6,2,0	0/1:4,1:5:15.07:36,0,15	1/1:9,0:9:11.29:76,11,0	0/0:1,0:1:0:0,0,0	1/1:12,1:12:32.73:282,33,0	0/1:10,1:9:7.50:81,0,7	1/1:11,0:10:19.85:112,20,0	./.
chr10	102283958	.	A	AAGAG	16562.67	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=-15.378;DP=689;FS=4.459;HRun=0;HaplotypeScore=101.3666;InbreedingCoeff=0.9391;MQ=70.26;MQ0=1;MQRankSum=-3.338;QD=46.92;ReadPosRankSum=4.101;VQSLOD=5.6987;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,32:50:95.90:2229,96,0	0/0:12,0:12:33.11:0,33,555	0/1:20,0:20:6.54:7,0,539	0/0:16,0:15:35.80:0,36,532	0/0:42,0:42:99:0,108,1747	1/1:3,13:17:39.13:986,39,0	1/1:2,18:20:54.19:1365,54,0	0/0:35,0:35:93.30:0,93,1533	1/1:7,15:22:42.14:1057,42,0	0/0:20,0:20:48.16:0,48,804	0/0:23,0:23:63.20:0,63,1046	0/0:15,0:15:36.11:0,36,595	0/0:22,0:22:60.21:0,60,1037	1/1:4,9:14:24.08:606,24,0	1/1:6,24:30:69.24:1713,69,0	0/0:22,0:22:57.19:0,57,963	1/1:5,37:45:93.32:2351,93,0	1/1:8,14:22:39.13:986,39,0	0/0:19,0:19:42.14:0,42,701	0/0:28,0:28:72.25:0,72,1238	0/0:18,0:18:42.13:0,42,700	1/1:8,21:30:56.98:1377,57,0	1/1:9,21:30:57.20:1429,57,0	1/1:5,29:34:72.25:1820,72,0	1/1:8,10:18:27.09:638,27,0	0/0:25,0:25:69.23:0,69,1155	0/0:33,0:33:87.28:0,87,1463	0/0:6,0:6:18.06:0,18,311
chr10	102284298	.	GGGA	G	4695.16	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-3.771;DP=593;FS=1.332;HRun=0;HaplotypeScore=96.6704;InbreedingCoeff=0.9767;MQ=65.83;MQ0=9;MQRankSum=-0.367;QD=25.80;ReadPosRankSum=1.048;VQSLOD=5.0396;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,26:45:93.29:1299,93,0	0/0:7,0:7:12.04:0,12,242	0/0:31,0:16:21.02:0,21,356	0/0:17,0:13:14.79:0,15,415	0/0:23,0:22:45.12:0,45,819	0/0:13,0:13:21.07:0,21,345	0/0:14,0:14:30.10:0,30,479	1/1:12,5:17:12.59:206,13,0	0/0:23,0:23:54.18:0,54,877	0/0:34,0:34:78.26:0,78,1543	0/0:18,0:18:48.16:0,48,953	0/0:11,0:11:27.09:0,27,528	0/0:24,0:24:51.17:0,51,1024	0/0:22,0:22:63.22:0,63,1021	0/0:24,0:24:57.18:0,57,892	0/0:14,0:14:36.12:0,36,727	0/0:46,0:46:93.32:0,93,1483	1/1:2,20:22:54.18:765,54,0	1/1:8,8:16:27.09:383,27,0	1/1:8,11:18:24.08:340,24,0	1/1:5,14:19:34:470,34,0	0/0:24,0:24:48.15:0,48,776	0/0:17,0:17:33.11:0,33,543	0/0:29,0:29:69.24:0,69,1113	0/0:20,0:19:24.08:0,24,391	1/1:5,15:19:45.15:637,45,0	1/1:3,16:19:32.98:468,33,0	1/1:2,3:5:9.02:128,9,0
chr10	102284384	.	AT	A	4991.30	PASS	AB=0.889;AC=23;AF=0.411;AN=56;BaseQRankSum=9.331;DP=552;FS=0.000;HRun=10;HaplotypeScore=64.9494;InbreedingCoeff=0.8803;MQ=64.86;MQ0=0;MQRankSum=0.891;QD=20.13;ReadPosRankSum=4.319;VQSLOD=5.5527;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,30:35:62.51:705,63,0	0/0:11,0:12:29.87:0,30,287	0/1:7,1:7:17.05:17,0,54	0/0:11,0:10:20.62:0,21,181	0/0:24,0:25:56.98:0,57,603	1/1:1,16:17:41.99:365,42,0	1/1:1,10:11:23.99:208,24,0	0/0:25,1:26:5.13:0,5,482	1/1:1,16:17:44.99:391,45,0	0/0:20,0:20:54.12:0,54,585	0/0:14,0:14:39.11:0,39,431	0/0:20,0:22:53.98:0,54,578	0/0:19,0:20:56.99:0,57,611	1/1:2,16:18:47.99:417,48,0	1/1:3,21:24:59.98:521,60,0	0/0:15,0:15:36.10:0,36,398	1/1:5,45:50:99:1016,117,0	0/0:20,0:20:42.11:0,42,464	0/0:23,0:24:44.93:0,45,457	0/0:14,1:15:30.04:0,30,318	0/0:19,2:22:1.85:0,2,450	1/1:2,12:14:35.99:313,36,0	1/1:3,16:19:38.02:337,38,0	1/1:2,13:15:32.99:287,33,0	1/1:2,18:20:47.99:417,48,0	0/0:24,0:24:69.19:0,69,763	0/0:24,0:24:63.17:0,63,697	0/0:10,0:10:21.06:0,21,230
chr10	102285705	.	GAAAAAACA	G	8493.41	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=16.303;DP=671;FS=1.116;HRun=0;HaplotypeScore=189.3587;InbreedingCoeff=0.5315;MQ=65.52;MQ0=5;MQRankSum=-12.757;QD=18.92;ReadPosRankSum=4.125;VQSLOD=4.0087;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:12.31:639,12,0	0/0:17,0:17:39.13:0,39,1493	0/1:26,0:16:10.27:10,0,189	0/0:26,0:14:16.33:0,16,419	0/0:40,0:40:99:0,117,3818	1/1:28,0:28:32.53:430,33,0	1/1:17,0:17:12:104,12,0	1/1:25,0:25:29.16:660,29,0	1/1:18,0:18:6.35:267,6,0	0/0:33,0:33:93.31:0,93,3287	0/0:44,0:44:99:0,126,4482	0/0:16,0:16:48.16:0,48,1530	0/0:23,0:23:63.19:0,63,2125	0/1:19,0:19:3.10:144,0,3	1/1:21,0:21:11.11:294,11,0	0/0:23,0:22:66.20:0,66,2515	0/1:20,0:20:24.01:164,0,24	1/1:1,22:23:21.07:566,21,0	1/1:17,0:17:38.49:488,38,0	1/1:35,0:35:90.15:1669,90,0	0/1:9,0:9:13.94:60,0,14	1/1:33,0:33:4.03:403,4,0	0/1:25,0:25:27.09:283,0,27	1/1:18,0:18:17.88:144,18,0	1/1:24,0:24:45:432,45,0	1/1:22,0:22:19.99:886,20,0	0/1:29,0:28:11.22:652,0,11	1/1:11,0:11:9.03:197,9,0
chr10	102285710	.	AACAAAAAC	A	14276.22	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=16.828;DP=661;FS=1.990;HRun=0;HaplotypeScore=163.7403;InbreedingCoeff=0.8834;MQ=60.79;MQ0=5;MQRankSum=-9.649;QD=31.72;ReadPosRankSum=1.566;VQSLOD=4.5314;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:39.09:924,39,0	0/0:13,0:13:39.11:0,39,1449	0/1:21,0:10:1.74:2,0,222	0/0:25,0:12:5.39:0,5,396	0/0:39,0:39:99:0,111,3667	1/1:30,0:30:57.19:935,57,0	1/1:17,0:17:12.04:205,12,0	1/1:2,26:28:75.04:1255,75,0	1/1:17,0:17:30.10:540,30,0	0/0:31,0:31:93.31:0,93,3241	0/0:42,0:42:99:0,126,4361	0/0:17,0:17:51.16:0,51,1523	0/0:22,0:22:63.22:0,63,2174	1/1:20,0:20:21.07:343,21,0	1/1:19,1:20:32.69:591,33,0	0/0:22,0:21:63.18:0,63,2435	1/1:20,0:21:12.29:388,12,0	1/1:22,0:22:21.07:434,21,0	1/1:1,15:16:48.13:866,48,0	1/1:0,38:38:99:2376,105,0	1/1:2,8:10:3.01:86,3,0	1/1:33,0:33:79.43:1056,79,0	1/1:24,0:24:45.44:681,45,0	1/1:16,0:16:18.06:289,18,0	1/1:26,1:27:45.15:803,45,0	1/1:2,19:21:54.14:1303,54,0	1/1:1,24:25:38.14:938,38,0	1/1:0,12:12:9.03:259,9,0
chr10	102285711	.	ACAAAAAC	A	15002.43	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=16.724;DP=652;FS=1.981;HRun=0;HaplotypeScore=149.4208;InbreedingCoeff=0.8854;MQ=60.87;MQ0=5;MQRankSum=-9.704;QD=33.87;ReadPosRankSum=1.489;VQSLOD=4.3669;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:38.96:629,39,0	0/0:13,0:13:39.11:0,39,1309	0/1:21,0:10:2.04:2,0,179	0/0:25,0:12:5.20:0,5,333	0/0:37,0:37:99:0,111,3274	1/1:0,27:29:57.20:1507,57,0	1/1:0,17:17:12.04:332,12,0	1/1:26,0:27:74.67:813,75,0	1/1:0,17:17:30.10:804,30,0	0/0:31,0:31:93.31:0,93,2907	0/0:42,0:42:99:0,126,3944	0/0:17,0:17:51.16:0,51,1359	0/0:22,0:22:63.20:0,63,1916	1/1:0,18:19:21.07:549,21,0	1/1:1,19:20:32.79:886,33,0	0/0:22,0:21:63.22:0,63,2237	1/1:2,18:21:24.78:584,25,0	1/1:22,0:22:21.06:262,21,0	1/1:15,0:16:47.77:547,48,0	1/1:38,0:38:99:1638,105,0	1/1:8,0:8:3.01:62,3,0	1/1:0,33:33:83.76:1745,84,0	1/1:0,24:24:48.23:1155,48,0	1/1:0,16:16:18.06:481,18,0	1/1:1,26:27:45.15:1226,45,0	1/1:19,0:20:54.10:934,54,0	1/1:26,0:25:38.03:662,38,0	1/1:12,0:12:9.03:186,9,0
chr10	102285713	.	AAAAAC	A	6782.23	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=15.262;DP=652;FS=0.354;HRun=0;HaplotypeScore=158.5327;InbreedingCoeff=0.8198;MQ=59.33;MQ0=5;MQRankSum=-14.320;QD=16.07;ReadPosRankSum=4.412;VQSLOD=4.4377;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:17.61:310,18,0	0/0:12,0:12:36.12:0,36,1023	0/0:20,0:9:16.19:0,16,211	0/0:25,0:12:18.30:0,18,350	0/0:38,0:38:99:0,102,2583	1/1:27,2:29:57.18:729,57,0	1/1:17,0:17:12.04:154,12,0	0/1:27,0:27:3.05:239,0,3	1/1:17,0:17:30.09:378,30,0	0/0:31,0:31:90.29:0,90,2318	0/0:41,0:41:99:0,117,3052	0/0:16,0:16:48.15:0,48,1078	0/0:24,0:24:66.22:0,66,1706	1/1:18,1:19:21.07:271,21,0	1/1:20,0:20:32.76:416,33,0	0/0:22,0:21:60.20:0,60,1737	1/1:20,1:21:5.98:251,6,0	1/1:22,0:22:19.61:98,20,0	0/1:16,0:16:7.86:157,0,8	1/1:38,0:38:63.87:832,64,0	1/1:8,0:8:3.01:37,3,0	1/1:33,0:33:48.02:678,48,0	1/1:24,0:24:30.30:482,30,0	1/1:16,0:16:18.05:214,18,0	1/1:27,0:27:45.15:578,45,0	1/1:20,0:20:38.96:490,39,0	1/1:26,0:25:23.08:358,23,0	1/1:12,0:12:9.03:111,9,0
chr10	102287184	.	G	GAC	1955.98	PASS	AB=0.859;AC=19;AF=0.380;AN=50;BaseQRankSum=-5.918;DP=643;FS=0.000;HRun=0;HaplotypeScore=104.8825;InbreedingCoeff=0.1141;MQ=62.11;MQ0=22;MQRankSum=0.928;QD=5.65;ReadPosRankSum=-0.611;VQSLOD=3.0371;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:23:8.52:0,9,42	0/0:9,0:9:3:0,3,32	./.	./.	0/1:25,0:26:6.37:6,0,104	1/1:15,11:26:6.01:70,6,0	0/1:15,6:22:43.44:74,0,43	0/0:20,0:18:0.47:0,0,1	0/1:12,8:20:52.67:77,0,53	0/0:31,0:30:12.01:0,12,118	0/1:24,0:23:1.08:1,0,104	0/0:19,0:17:9.02:0,9,97	0/0:10,0:11:8.85:0,9,79	0/1:10,3:13:43.74:180,0,44	1/1:25,3:28:24.03:289,24,0	0/0:19,0:32:39.76:0,40,232	1/1:18,15:35:30.99:444,31,0	0/1:10,0:18:12.75:13,0,85	./.	0/1:18,0:27:9.54:10,0,42	0/0:17,0:15:2.84:0,3,14	0/1:12,15:27:14.34:204,0,14	1/1:26,0:26:7.62:204,8,0	1/1:19,15:34:30.05:419,30,0	0/1:12,5:17:20.36:121,0,20	0/0:12,0:21:8.51:0,9,42	0/0:9,0:12:2.84:0,3,14	0/0:6,0:14:2.26:0,2,23
chr10	102287309	.	GCACA	G	3481.13	PASS	AB=0.783;AC=26;AF=0.500;AN=52;BaseQRankSum=3.787;DP=569;FS=10.461;HRun=0;HaplotypeScore=96.5599;InbreedingCoeff=0.6217;MQ=63.07;MQ0=11;MQRankSum=-0.173;QD=11.76;ReadPosRankSum=2.142;VQSLOD=2.4977;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:25:19.74:0,20,184	0/0:13,0:13:26.85:0,27,501	./.	./.	0/0:29,0:28:52.46:0,52,975	1/1:18,3:22:11.71:255,12,0	1/1:10,10:20:11.70:190,12,0	1/1:12,0:14:8.78:68,9,0	1/1:9,8:18:33.09:480,33,0	0/0:23,0:21:37.32:0,37,590	0/0:16,0:16:32.44:0,32,617	0/0:19,0:19:41.88:0,42,940	0/0:16,0:18:38.83:0,39,726	1/1:10,6:17:21.06:306,21,0	1/1:10,10:20:24.52:354,25,0	0/0:24,0:24:42.14:0,42,975	0/1:16,7:23:69.84:330,0,70	0/0:9,0:13:8.99:0,9,107	0/1:14,4:18:3.92:112,0,4	0/1:20,3:21:47.22:164,0,47	1/1:16,6:21:3.01:47,3,0	0/1:10,8:18:35.59:217,0,36	1/1:8,8:15:15.04:218,15,0	1/1:15,12:28:14.55:340,15,0	1/1:5,13:18:12.04:190,12,0	0/0:17,0:17:31.65:0,32,487	1/1:5,10:14:15.04:209,15,0	0/0:10,0:10:0.94:0,1,2
chr10	102289751	.	GGT	G	2121.09	PASS	AB=0.943;AC=26;AF=0.481;AN=54;BaseQRankSum=1.537;DP=674;FS=1.852;HRun=0;HaplotypeScore=97.4136;InbreedingCoeff=0.4891;MQ=61.95;MQ0=30;MQRankSum=-0.527;QD=6.03;ReadPosRankSum=0.812;VQSLOD=3.3097;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:45:11.47:0,11,82	0/1:7,0:7:22.83:23,0,78	./.	0/0:58,0:21:0:0,0,0	0/1:22,3:26:19.88:20,0,283	1/1:9,5:16:14.61:125,15,0	1/1:23,3:25:17.07:154,17,0	0/0:25,0:24:14.37:0,14,107	1/1:8,8:16:17.90:196,18,0	0/1:24,2:25:41.63:42,0,202	0/1:20,1:20:14.32:14,0,206	0/0:17,0:17:29.95:0,30,388	0/0:17,0:17:20.76:0,21,304	1/1:10,6:15:14.77:144,15,0	1/1:11,10:22:18.35:179,18,0	0/1:18,2:20:5.75:6,0,325	1/1:19,3:23:24.07:221,24,0	0/1:11,0:19:16.83:17,0,76	0/0:12,0:13:10.99:0,11,70	0/0:6,0:14:10.07:0,10,64	0/0:40,0:49:19.24:0,19,171	1/1:16,13:28:23.90:244,24,0	1/1:16,4:20:17.78:176,18,0	1/1:23,11:35:56.47:537,56,0	1/1:14,10:27:26.24:220,26,0	0/0:15,0:21:17.09:0,17,157	0/0:6,0:10:5.97:0,6,46	0/0:7,0:6:6.31:0,6,110
chr10	102290086	.	TA	T	160.64	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.983;DP=612;FS=1.850;HRun=11;HaplotypeScore=64.7635;InbreedingCoeff=0.7885;MQ=76.28;MQ0=0;MQRankSum=-0.837;QD=13.39;ReadPosRankSum=1.627;VQSLOD=3.8992;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,2:39:40.77:0,41,829	0/0:7,0:7:21.05:0,21,220	0/0:18,0:18:14.89:0,15,196	0/0:12,0:13:22.43:0,22,180	0/0:29,0:29:66.17:0,66,703	0/0:27,0:27:78.20:0,78,831	0/0:30,0:30:90.22:0,90,952	0/0:30,0:30:50.58:0,51,737	0/0:22,0:22:54.13:0,54,571	0/0:34,0:34:78.19:0,78,824	0/0:20,0:20:48.12:0,48,512	0/0:27,0:27:54.26:0,54,739	0/0:22,0:22:57.05:0,57,582	0/0:21,1:22:32.49:0,32,544	0/0:22,0:22:66.17:0,66,704	0/0:26,0:26:69.10:0,69,715	0/0:25,0:25:66.17:0,66,703	1/1:1,11:12:3.98:239,4,0	0/0:22,1:24:41.28:0,41,593	0/0:9,0:9:18.04:0,18,186	0/0:27,0:27:73.89:0,74,764	0/0:23,0:23:62.99:0,63,654	0/0:20,1:21:29.48:0,29,512	0/0:9,0:9:24.02:0,24,244	0/0:22,1:23:35.47:0,35,566	0/0:20,0:20:48.12:0,48,512	0/0:23,0:23:60.14:0,60,632	0/0:7,0:7:18.05:0,18,192
chr10	102290244	.	CT	C	3953.97	PASS	AB=0.976;AC=44;AF=0.786;AN=56;BaseQRankSum=6.917;DP=593;FS=2.886;HRun=1;HaplotypeScore=104.7567;InbreedingCoeff=-0.2433;MQ=90.77;MQ0=0;MQRankSum=-1.598;QD=6.67;ReadPosRankSum=10.091;VQSLOD=-0.0419;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:39:89.63:352,90,0	1/1:12,0:12:28.12:117,28,0	0/1:28,0:28:39.24:39,0,68	0/1:14,4:18:77.40:80,0,77	0/1:18,0:18:4.25:120,0,4	0/1:17,1:18:1.59:167,0,2	0/1:19,1:20:1.54:123,0,2	0/1:22,0:22:12.86:84,0,13	1/1:24,0:24:34.23:196,34,0	0/1:21,0:21:19.47:84,0,19	1/1:15,0:15:6.86:82,7,0	0/1:13,0:13:2.10:63,0,2	1/1:9,0:9:23.24:93,23,0	1/1:22,0:22:19.17:154,19,0	1/1:21,1:22:26.53:200,27,0	1/1:25,0:25:31.44:190,31,0	1/1:38,0:37:81.74:353,82,0	1/1:29,0:29:47.05:229,47,0	0/1:28,0:28:20.09:103,0,20	1/1:19,0:19:5.88:164,6,0	1/1:17,0:17:16.06:114,16,0	1/1:12,0:12:27.48:100,27,0	0/1:16,0:16:12.87:89,0,13	1/1:23,0:23:32.70:204,33,0	0/1:18,0:18:37.50:68,0,37	1/1:22,0:22:17.75:119,18,0	1/1:25,0:25:8.68:172,9,0	0/1:20,0:20:22.92:94,0,23
chr10	102290250	.	CA	C	5198.63	PASS	AB=0.960;AC=49;AF=0.875;AN=56;BaseQRankSum=7.104;DP=591;FS=27.080;HRun=1;HaplotypeScore=101.1027;InbreedingCoeff=-0.1250;MQ=91.98;MQ0=0;MQRankSum=-2.277;QD=8.80;ReadPosRankSum=9.797;VQSLOD=-0.1891;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:39,2:41:50.13:375,50,0	1/1:11,0:11:29:147,29,0	0/1:30,0:30:54.78:55,0,120	0/1:18,0:18:72.62:73,0,88	1/1:16,0:16:26.28:180,26,0	0/1:16,2:18:0.04:161,0,0	1/1:21,0:21:25.25:189,25,0	0/1:24,0:24:46.69:114,0,47	1/1:21,3:24:37.62:262,38,0	1/1:19,1:20:39.40:207,39,0	0/1:16,0:16:8.19:100,0,8	0/1:12,2:14:13.81:117,0,14	1/1:11,0:11:24.17:112,24,0	1/1:22,0:22:21.03:182,21,0	1/1:20,2:22:28.62:241,29,0	1/1:22,3:25:34.59:276,35,0	1/1:38,1:38:86.10:398,86,0	1/1:29,0:29:46.06:258,46,0	1/1:25,0:25:56.42:194,56,0	1/1:19,0:19:26.28:205,26,0	0/1:17,1:18:5.11:129,0,5	1/1:14,0:14:28.95:140,29,0	1/1:14,0:14:31.86:165,32,0	1/1:21,1:22:55.59:252,56,0	1/1:16,0:16:9.40:92,9,0	1/1:21,0:21:41.19:143,41,0	1/1:22,2:24:53.48:280,53,0	1/1:17,0:17:37.05:151,37,0
chr10	102291588	.	AG	A	5285.97	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=1.215;DP=406;FS=12.679;HRun=3;HaplotypeScore=64.1642;InbreedingCoeff=0.9793;MQ=82.07;MQ0=10;MQRankSum=-3.704;QD=34.10;ReadPosRankSum=2.886;VQSLOD=4.5177;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:18:54.17:666,54,0	0/0:3,0:3:9.03:0,9,123	0/0:69,0:39:66.21:0,66,786	0/0:52,1:23:29.98:0,30,367	0/0:8,0:8:21.07:0,21,301	1/1:0,7:7:21.07:260,21,0	1/1:0,14:14:39.12:480,39,0	0/0:12,0:12:32.87:0,33,458	1/1:2,11:13:36.11:436,36,0	0/0:6,0:6:18.06:0,18,259	0/0:10,0:9:30.10:0,30,430	0/0:12,0:12:36.12:0,36,514	0/0:8,0:8:24.08:0,24,344	1/1:0,10:10:27.08:333,27,0	1/1:0,15:15:45.14:557,45,0	0/0:7,0:7:21.06:0,21,283	1/1:1,13:14:36.11:444,36,0	1/1:0,8:8:24.08:297,24,0	0/0:4,0:4:12.03:0,12,156	0/0:12,0:12:33.11:0,33,470	0/0:12,0:12:26.98:0,27,330	1/1:0,13:13:39.12:482,39,0	1/1:1,10:11:30.01:335,30,0	1/1:2,13:15:36.11:440,36,0	1/1:0,16:16:45.14:556,45,0	0/0:14,0:14:42.14:0,42,600	0/0:16,0:16:48.11:0,48,645	0/0:4,0:4:12.04:0,12,163
chr10	102292541	.	CGGG	C	5760.71	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-8.781;DP=485;FS=4.322;HRun=12;HaplotypeScore=98.5186;InbreedingCoeff=0.9596;MQ=84.33;MQ0=0;MQRankSum=-0.620;QD=26.19;ReadPosRankSum=7.727;VQSLOD=3.6654;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:23.86:0,24,183	0/0:5,0:6:12.02:0,12,201	0/0:24,0:26:47.99:0,48,532	0/0:17,0:15:14.88:0,15,127	0/0:8,0:8:12:0,12,135	1/1:2,15:17:36.11:455,36,0	1/1:3,18:21:39.12:489,39,0	0/0:18,0:19:30.04:0,30,353	1/1:4,22:27:60.09:738,60,0	0/0:6,0:7:6.01:0,6,86	0/0:8,0:9:8.99:0,9,76	0/0:14,0:15:30.02:0,30,418	0/0:12,0:16:24.47:0,24,287	1/1:3,9:12:27.06:336,27,0	1/1:0,14:14:36.12:455,36,0	0/0:7,0:8:15.02:0,15,198	1/1:2,28:30:81.24:1023,81,0	1/1:0,16:17:45.08:548,45,0	0/0:17,0:17:39.10:0,39,470	0/0:10,0:13:27.02:0,27,335	0/0:33,0:34:87.28:0,87,1108	1/1:5,13:19:27.05:325,27,0	1/1:7,16:23:42.11:524,42,0	1/1:3,22:26:43.70:566,44,0	1/1:1,13:14:24.06:303,24,0	0/0:22,0:23:54.13:0,54,640	0/0:15,0:17:42.14:0,42,543	0/0:5,0:5:15.05:0,15,191
chr10	102292547	.	G	GGT	4805.97	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-14.379;DP=471;FS=3.766;HRun=0;HaplotypeScore=96.8013;InbreedingCoeff=0.9751;MQ=85.69;MQ0=0;MQRankSum=0.258;QD=41.08;ReadPosRankSum=0.382;VQSLOD=6.3602;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:28.58:0,29,208	0/0:4,0:4:12.03:0,12,158	0/0:29,0:27:63.93:0,64,624	0/0:21,0:18:24.19:0,24,208	0/0:7,0:7:14.80:0,15,147	0/0:16,0:16:35.80:0,36,270	0/0:20,0:20:38.81:0,39,294	1/1:3,14:17:47.09:585,47,0	0/0:27,0:27:65.65:0,66,494	0/0:6,0:6:8.97:0,9,89	0/0:10,0:10:19.24:0,19,159	0/0:17,0:17:42.45:0,42,429	0/0:15,0:15:30:0,30,291	0/0:12,0:12:32.88:0,33,255	0/0:14,0:14:35.80:0,36,270	0/0:9,0:9:21.01:0,21,216	0/0:29,0:29:83.60:0,84,632	0/0:19,0:19:47.75:0,48,362	1/1:0,15:15:44.87:676,45,0	1/1:4,9:13:27:362,27,0	1/1:1,31:32:87.30:1438,87,0	0/0:18,0:18:35.88:0,36,293	0/0:21,0:21:47.50:0,47,370	0/0:25,0:24:50.76:0,51,387	0/0:16,0:16:32.87:0,33,255	1/1:2,18:20:57.16:841,57,0	1/1:3,12:15:42.12:655,42,0	1/1:0,5:5:15.05:249,15,0
chr10	102292551	.	GGGA	G	1871	PASS	AB=0.990;AC=17;AF=0.304;AN=56;BaseQRankSum=3.599;DP=458;FS=2.742;HRun=0;HaplotypeScore=105.7732;InbreedingCoeff=0.5534;MQ=83.44;MQ0=0;MQRankSum=-3.148;QD=8.62;ReadPosRankSum=9.239;VQSLOD=1.6285;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:33.91:0,34,393	0/0:4,0:4:12.04:0,12,227	0/0:25,0:23:62.72:0,63,765	0/0:20,0:17:20.14:0,20,258	0/0:8,0:8:18.04:0,18,273	0/1:17,0:17:10.14:129,0,10	1/1:19,1:20:14.75:189,15,0	0/0:16,0:16:48.12:0,48,736	1/1:25,1:26:12.60:288,13,0	0/0:5,0:5:12.01:0,12,174	0/0:9,0:9:21.04:0,21,242	0/0:14,0:14:39.11:0,39,630	0/0:15,0:15:36.55:0,37,482	1/1:10,1:11:3.83:134,4,0	1/1:14,0:14:33.28:161,33,0	0/0:9,0:9:23.66:0,24,371	1/1:30,0:30:34.57:377,35,0	1/1:19,0:19:17.13:169,17,0	0/0:16,0:16:48.14:0,48,818	0/0:10,0:10:30.04:0,30,439	0/0:36,0:36:96.28:0,96,1693	0/1:18,0:18:98.26:110,0,98	0/1:19,1:20:6.15:237,0,6	0/1:26,0:25:30.84:169,0,31	0/1:16,0:16:60.43:98,0,60	0/0:17,0:17:48.16:0,48,856	0/0:15,0:15:45.14:0,45,823	0/0:5,0:5:15.05:0,15,294
chr10	102293406	.	TG	T	5590.80	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=19.761;DP=736;FS=3.189;HRun=2;HaplotypeScore=114.4619;InbreedingCoeff=0.9998;MQ=80.59;MQ0=2;MQRankSum=-2.176;QD=16.84;ReadPosRankSum=5.353;VQSLOD=5.1290;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:78.25:1010,78,0	0/0:10,0:10:27.07:0,27,383	0/0:25,0:25:57.33:0,57,710	0/0:19,0:19:45:0,45,534	0/0:27,0:27:75.07:0,75,1002	1/1:29,0:29:76.49:472,76,0	1/1:30,0:30:67.67:419,68,0	0/0:42,0:42:99:0,120,1673	1/1:29,0:29:67.67:418,68,0	0/0:31,0:31:87.29:0,87,1288	0/0:35,0:35:99:0,105,1465	0/0:20,0:20:60.17:0,60,840	0/0:23,0:23:69.22:0,69,1011	1/1:23,0:23:47.07:291,47,0	1/1:36,0:35:97.09:599,97,0	0/0:30,0:30:85.24:0,85,1298	1/1:30,0:30:76.49:472,76,0	1/1:13,0:13:32.36:199,32,0	0/0:22,0:22:66.05:0,66,853	0/0:28,0:28:84.26:0,84,1234	0/0:22,0:22:63.17:0,63,879	1/1:35,0:34:91.23:565,91,0	1/1:27,0:25:64.72:400,65,0	1/1:32,0:30:73.55:455,74,0	1/1:20,0:20:47.07:291,47,0	0/0:31,0:31:90.25:0,90,1254	0/0:26,0:26:75.23:0,75,1081	0/0:13,0:13:39.12:0,39,564
chr10	102293407	.	GGT	G	12257.88	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=17.177;DP=730;FS=2.026;HRun=0;HaplotypeScore=104.3408;InbreedingCoeff=0.9957;MQ=80.36;MQ0=2;MQRankSum=-1.684;QD=37.15;ReadPosRankSum=5.662;VQSLOD=6.9574;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:12.25:29,12,0	0/0:9,0:9:27.08:0,27,511	0/0:25,0:25:61.95:0,62,1002	0/0:19,0:19:45.11:0,45,735	0/0:26,0:26:75.14:0,75,1355	1/1:0,29:29:78.27:1268,78,0	1/1:0,29:29:69.24:1122,69,0	0/0:42,0:42:99:0,120,2301	1/1:0,29:29:69.24:1122,69,0	0/0:30,0:30:87.30:0,87,1735	0/0:36,0:36:99:0,108,1975	0/0:20,0:20:60.17:0,60,1111	0/0:23,0:23:69.22:0,69,1361	1/1:0,23:23:48.16:780,48,0	1/1:1,34:34:99:1609,99,0	0/0:30,0:30:90.14:0,90,1779	1/1:0,30:30:78.27:1268,78,0	1/1:0,13:13:33.11:535,33,0	0/0:22,0:22:66.06:0,66,1124	0/0:28,0:28:84.27:0,84,1664	0/0:21,0:21:63.19:0,63,1199	1/1:0,35:34:93.27:1483,93,0	1/1:1,26:25:66.17:1041,66,0	1/1:0,32:30:75.26:1220,75,0	1/1:0,20:20:48.16:781,48,0	0/0:30,0:30:90.27:0,90,1685	0/0:26,0:26:78.24:0,78,1477	0/0:13,0:13:39.12:0,39,756
chr10	102294469	.	GCACACACA	G	863.26	PASS	AB=0.690;AC=16;AF=0.308;AN=52;BaseQRankSum=1.584;DP=660;FS=17.462;HRun=0;HaplotypeScore=218.4716;InbreedingCoeff=0.4726;MQ=55.42;MQ0=13;MQRankSum=-1.481;QD=3.15;ReadPosRankSum=0.355;VQSLOD=1.5395;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,2:46:99:148,0,248	0/0:7,0:9:15.05:0,15,486	./.	./.	0/0:14,0:14:30.10:0,30,1113	1/1:3,8:13:6.02:152,6,0	1/1:28,12:40:13.84:215,14,0	0/0:18,0:25:31.26:0,31,356	1/1:5,11:16:1.68:74,2,0	0/0:27,0:30:63.10:0,63,1788	0/0:18,0:17:39.13:0,39,1333	0/0:26,0:26:45.02:0,45,1583	0/0:22,0:26:57.18:0,57,1929	1/1:6,13:21:5.01:152,5,0	0/0:6,2:18:2.52:0,3,124	0/1:14,0:16:25.78:26,0,1039	0/1:8,8:16:22.54:143,0,23	0/0:13,0:33:50.70:0,51,813	0/0:11,0:14:15.79:0,16,93	0/0:4,0:19:16.55:0,17,64	0/0:29,0:50:61.10:0,61,328	0/1:9,11:22:0.15:0,0,1	0/1:8,10:19:0.19:0,0,1	0/1:17,22:42:0.19:0,0,1	1/1:9,5:22:5.66:102,6,0	0/0:25,0:25:66.23:0,66,2328	0/0:7,0:19:18.66:0,19,88	0/0:13,0:13:15.05:0,15,591
chr10	102296324	.	GT	G	8686.39	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=11.713;DP=667;FS=9.501;HRun=4;HaplotypeScore=76.6488;InbreedingCoeff=0.9988;MQ=83.65;MQ0=0;MQRankSum=-1.492;QD=29.65;ReadPosRankSum=7.592;VQSLOD=3.7806;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:84.24:994,84,0	0/0:11,0:11:33.10:0,33,436	0/0:22,0:22:33.39:0,33,664	0/0:24,0:23:59.70:0,60,738	0/0:27,0:27:81.13:0,81,1030	1/1:0,17:17:42.13:503,42,0	1/1:0,24:24:59.96:719,60,0	0/0:35,0:35:96.12:0,96,1206	1/1:0,28:28:63.19:754,63,0	0/0:22,0:22:60.15:0,60,783	0/0:6,0:6:18.05:0,18,231	0/0:30,0:30:87.26:0,87,1162	0/0:34,0:34:96.29:0,96,1286	1/1:3,22:25:48.15:575,48,0	1/1:2,32:34:78.24:935,78,0	0/0:35,0:35:99:0,99,1319	1/1:3,31:34:93.28:1115,93,0	1/1:2,17:19:48.15:575,48,0	0/0:20,0:20:54.12:0,54,662	0/0:21,0:21:60.15:0,60,756	0/0:27,0:27:75.21:0,75,1000	1/1:0,15:15:42.13:503,42,0	1/1:0,22:22:60.18:718,60,0	1/1:1,23:24:63.19:755,63,0	1/1:0,18:18:45.14:539,45,0	0/0:23,0:23:66.16:0,66,833	0/0:22,0:22:57.16:0,57,757	0/0:15,0:15:45.09:0,45,558
chr10	102297781	.	A	AGT	1809.72	PASS	AB=0.809;AC=31;AF=0.554;AN=56;BaseQRankSum=-2.767;DP=707;FS=0.000;HRun=0;HaplotypeScore=162.9077;InbreedingCoeff=0.3795;MQ=57.48;MQ0=25;MQRankSum=0.979;QD=4.58;ReadPosRankSum=1.348;VQSLOD=3.0250;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:33:7.46:76,7,0	0/1:13,1:15:24.35:81,0,24	0/0:84,0:32:8.31:0,8,77	0/0:91,0:29:15.49:0,15,128	0/0:21,0:20:3.89:0,4,33	0/0:8,1:10:3.01:0,3,33	1/1:17,6:26:18.05:253,18,0	1/1:20,0:20:8.60:56,9,0	0/1:12,7:19:19.63:165,0,20	0/0:24,0:25:26.89:0,27,271	0/0:10,0:10:0.39:0,0,2	0/0:19,0:21:14.65:0,15,119	0/0:19,0:20:14.85:0,15,139	0/1:14,3:18:34.86:35,0,38	0/1:21,9:30:48.70:163,0,49	0/0:16,0:17:17.84:0,18,167	1/1:29,6:36:18.06:266,18,0	1/1:10,0:10:2.92:17,3,0	1/1:17,0:18:3:26,3,0	1/1:12,0:12:0.23:1,0,0	1/1:38,1:40:9.02:115,9,0	1/1:12,2:15:6.49:91,6,0	0/0:9,3:13:4.10:0,4,20	1/1:20,8:29:15.05:227,15,0	0/1:16,4:21:18.62:166,0,19	1/1:21,0:21:11.49:90,11,0	1/1:12,0:16:9.03:119,9,0	1/1:15,0:14:3.01:41,3,0
chr10	102298354	.	TCG	T	673.97	PASS	AB=0.949;AC=25;AF=0.658;AN=38;BaseQRankSum=0.897;DP=208;FS=24.210;HRun=0;HaplotypeScore=61.0370;InbreedingCoeff=0.2507;MQ=34.79;MQ0=2;MQRankSum=-2.895;QD=5.07;ReadPosRankSum=-0.639;VQSLOD=0.2281;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,1:2:3.01:45,3,0	0/1:9,0:5:3.64:4,0,55	0/0:3,0:3:5.89:0,6,44	1/1:6,3:7:3.01:45,3,0	0/1:12,0:11:10.40:12,0,10	1/1:8,0:8:2.96:19,3,0	1/1:9,0:8:14.61:89,15,0	./.	0/1:12,1:13:99:130,0,111	0/1:10,0:10:8.23:8,0,47	0/1:7,2:9:46.83:47,0,87	0/0:11,0:11:11.98:0,12,118	1/1:6,0:6:0.47:1,0,0	./.	0/0:10,0:10:21.02:0,21,195	1/1:6,0:6:8.82:54,9,0	1/1:4,0:4:2.98:22,3,0	1/1:11,0:11:19.92:123,20,0	./.	./.	./.	./.	./.	./.	1/1:16,0:16:13.36:149,13,0	1/1:9,0:9:9.77:61,10,0	0/0:2,0:2:5.90:0,6,37
chr10	102301170	.	A	AATGTCTGAAATATGTTGT	1441.17	PASS	AB=0.767;AC=20;AF=0.909;AN=22;BaseQRankSum=-2.732;DP=25;FS=8.822;HRun=0;HaplotypeScore=33.9097;InbreedingCoeff=-0.2586;MQ=180.48;MQ0=0;MQRankSum=-1.926;QD=60.05;ReadPosRankSum=-1.926;VQSLOD=1.0422;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,0:1:3.01:67,3,0	0/1:4,0:7:17.41:662,0,17	0/1:4,1:5:39.47:262,0,39	1/1:2,0:2:6:131,6,0	./.	./.	./.	1/1:1,0:1:3.01:50,3,0	./.	./.	./.	./.	./.	1/1:2,0:2:5.99:50,6,0	1/1:1,0:1:2.97:20,3,0	./.	./.	1/1:1,0:1:3:25,3,0	1/1:2,0:2:6.01:132,6,0	1/1:1,0:1:2.99:24,3,0	./.	./.	./.	./.	./.	./.	1/1:1,0:1:3.01:104,3,0
chr10	102302983	.	T	TAC	1067.70	PASS	AB=0.752;AC=2;AF=0.036;AN=56;BaseQRankSum=6.265;DP=1215;FS=15.382;HRun=0;HaplotypeScore=368.9942;InbreedingCoeff=-0.0389;MQ=50.32;MQ0=3;MQRankSum=-5.157;QD=17.22;ReadPosRankSum=-0.547;VQSLOD=2.8616;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,28:40:86.74:1119,0,87	0/0:19,0:19:36.12:0,36,459	0/0:40,0:22:46.70:0,47,568	0/0:61,0:34:59.60:0,60,720	0/0:32,1:33:77.92:0,78,970	0/0:22,0:22:31.55:0,32,489	0/0:51,0:51:99:0,108,1343	0/0:45,0:44:81.26:0,81,1028	0/0:55,0:55:99:0,123,1525	0/0:66,0:66:99:0,133,1718	0/0:35,0:35:89.64:0,90,1092	0/0:74,2:76:99:0,186,2326	0/0:46,0:47:96.23:0,96,1250	0/0:55,0:54:99:0,125,1525	0/0:66,0:66:99:0,145,1875	0/0:38,3:42:24.13:0,24,1061	0/0:28,0:28:68.84:0,69,873	0/0:23,0:23:57.98:0,58,802	0/0:27,0:26:52.25:0,52,707	0/0:51,0:51:89.79:0,90,1148	0/0:88,0:86:99:0,183,2347	0/0:47,0:47:74.52:0,75,1085	0/0:37,0:37:43.84:0,44,827	0/0:43,0:43:87.15:0,87,1118	0/0:37,0:37:69.22:0,69,938	0/0:43,0:43:58.63:0,59,1246	0/1:20,2:22:37.05:37,0,455	0/0:16,0:16:9.90:0,10,361
chr10	102303034	.	TCA	T	1091.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.633;DP=1327;FS=3.922;HRun=0;HaplotypeScore=281.5388;InbreedingCoeff=0.9646;MQ=56.47;MQ0=12;MQRankSum=-0.417;QD=23.72;ReadPosRankSum=0.610;VQSLOD=3.7747;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,33:46:96.20:1186,96,0	0/0:23,0:23:43.80:0,44,895	0/0:63,0:16:11.33:0,11,218	0/0:65,0:28:27.95:0,28,254	0/0:34,0:34:90.25:0,90,1454	0/0:27,0:27:51.16:0,51,822	0/0:40,0:40:93.06:0,93,1523	0/0:57,0:53:99:0,126,2060	0/0:59,0:59:99:0,141,2219	0/0:65,0:65:99:0,159,2550	0/0:35,0:35:93.27:0,93,1492	0/0:79,0:79:99:0,172,3147	0/0:65,0:65:99:0,178,2971	0/0:64,0:63:99:0,135,2253	0/0:60,0:59:99:0,138,2249	0/0:53,0:53:99:0,141,2316	0/0:35,0:34:87.28:0,87,1411	0/0:26,0:26:51.71:0,52,1007	0/0:27,0:24:63.20:0,63,993	0/0:36,1:37:90.28:0,90,1473	0/0:114,1:115:99:0,218,4221	0/0:51,0:51:99:0,114,1826	0/0:33,0:33:69.20:0,69,1118	0/0:46,0:46:99:0,111,1805	0/0:28,0:28:63.22:0,63,1058	0/0:51,0:50:99:0,126,1986	0/0:21,0:21:57.07:0,57,864	0/0:20,0:21:34.55:0,35,737
chr10	102303486	.	GACAC	G	6780.82	PASS	AB=0.759;AC=27;AF=0.482;AN=56;BaseQRankSum=0.160;DP=860;FS=0.000;HRun=0;HaplotypeScore=262.8453;InbreedingCoeff=0.4885;MQ=60.23;MQ0=6;MQRankSum=-6.135;QD=12.49;ReadPosRankSum=1.196;VQSLOD=3.6826;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:37:26.99:234,27,0	0/0:7,0:8:14.79:0,15,280	0/0:33,0:18:8.90:0,9,139	0/0:49,0:26:4.72:0,5,142	0/0:25,0:26:54.02:0,54,1250	1/1:15,14:30:46.61:703,47,0	1/1:17,12:29:30.56:460,31,0	0/1:27,0:34:3.94:4,0,136	1/1:19,24:43:64.06:977,64,0	0/0:51,0:50:46.93:0,47,1890	0/0:12,0:12:30.10:0,30,723	0/1:32,2:35:33.61:34,0,1145	0/0:29,1:30:20.43:0,20,1472	0/1:18,16:36:28.13:748,0,28	1/1:12,18:32:60.10:867,60,0	0/0:29,0:29:54.17:0,54,1239	1/1:15,6:21:18.06:293,18,0	0/1:15,2:27:57.53:58,0,138	0/1:18,1:27:44.98:45,0,162	0/1:8,1:23:58.26:58,0,128	0/1:33,1:40:96.41:134,0,96	1/1:15,15:31:39.03:528,39,0	1/1:6,17:24:32.41:511,32,0	1/1:29,14:44:18.49:572,18,0	1/1:10,16:29:29.61:556,30,0	0/0:26,0:33:66.15:0,66,969	0/0:11,1:25:44.38:0,44,197	0/0:10,0:19:41.93:0,42,750
chr10	102304873	.	ACACATG	A	2623.11	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.641;DP=875;FS=0.540;HRun=0;HaplotypeScore=180.9844;InbreedingCoeff=0.9243;MQ=59.76;MQ0=6;MQRankSum=-4.712;QD=18.60;ReadPosRankSum=-4.183;VQSLOD=2.3196;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,114,3323	0/0:10,0:10:27.06:0,27,716	0/0:35,0:17:39.01:0,39,657	0/0:41,0:18:31.10:0,31,775	0/0:22,0:22:54.19:0,54,1560	0/0:26,0:26:78.25:0,78,2224	0/0:38,0:38:84.27:0,84,2534	1/1:9,29:38:87.30:1603,87,0	0/0:44,0:44:99:0,126,3977	0/0:39,0:39:99:0,111,3564	0/0:10,0:10:27.09:0,27,833	0/0:41,0:41:99:0,102,3215	0/0:42,0:42:99:0,120,3642	0/0:57,0:57:99:0,147,4582	0/0:39,0:39:99:0,111,3451	0/0:31,0:31:93.32:0,93,2939	0/0:23,0:23:61.43:0,61,1937	0/0:24,0:24:54.18:0,54,1475	1/1:11,8:17:24.08:417,24,0	1/1:3,8:11:2.88:56,3,0	1/1:12,39:50:5.28:83,5,0	0/0:25,0:25:60.06:0,60,1881	0/0:17,0:17:42.14:0,42,1175	0/0:52,0:52:99:0,138,4229	0/0:24,0:24:62.83:0,63,2055	0/0:39,0:39:99:0,111,3362	1/1:6,16:22:30.10:626,30,0	0/0:8,0:8:18.06:0,18,555
chr10	102304979	.	GCA	G	11486.79	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=11.316;DP=967;FS=9.589;HRun=0;HaplotypeScore=131.6656;InbreedingCoeff=0.9963;MQ=58.08;MQ0=10;MQRankSum=4.474;QD=26.90;ReadPosRankSum=4.660;VQSLOD=6.1496;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,60:69:99:1671,134,0	0/0:11,0:11:30.10:0,30,496	0/0:47,0:18:22.85:0,23,538	0/0:43,0:23:23.69:0,24,356	0/0:22,0:22:57.18:0,57,921	1/1:3,19:22:51.16:644,51,0	1/1:10,32:42:69.02:871,69,0	0/0:39,0:37:93.31:0,93,1500	1/1:2,34:36:93.30:1174,93,0	0/0:37,0:37:52.20:0,52,1325	0/0:22,0:23:56.99:0,57,901	0/0:31,2:33:14.57:0,15,1312	0/0:38,0:38:87.30:0,87,1432	1/1:3,32:35:87.18:1098,87,0	1/1:7,35:42:93.30:1174,93,0	0/0:21,1:22:22.34:0,22,907	1/1:4,19:23:48.15:606,48,0	1/1:4,25:29:65.15:815,65,0	0/0:17,0:14:30.10:0,30,494	0/0:26,0:26:66.22:0,66,1073	0/0:88,3:90:90.78:0,91,3070	1/1:5,16:21:48.15:605,48,0	1/1:8,18:26:45.14:568,45,0	1/1:10,41:51:78.61:1226,79,0	1/1:1,29:31:84.10:1036,84,0	0/0:39,0:39:99:0,102,1672	0/0:33,0:33:87.28:0,87,1419	0/0:18,0:18:48.16:0,48,798
chr10	102305129	.	T	TAC	1026.95	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.118;DP=870;FS=14.692;HRun=0;HaplotypeScore=199.0527;InbreedingCoeff=0.9943;MQ=56.71;MQ0=3;MQRankSum=1.684;QD=27.76;ReadPosRankSum=-0.186;VQSLOD=3.1862;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,30:37:66.23:1122,66,0	0/0:10,0:10:26.76:0,27,319	0/0:33,0:13:28.30:0,28,320	0/0:45,0:26:31.97:0,32,553	0/0:28,0:28:72.08:0,72,918	0/0:26,0:26:65.61:0,66,806	0/0:41,0:40:99:0,99,1256	0/0:38,0:38:88.68:0,89,1119	0/0:30,0:30:76.24:0,76,1028	0/0:42,0:42:99:0,114,1427	0/0:16,0:16:36.12:0,36,468	0/0:38,0:38:81.71:0,82,1073	0/0:22,0:22:63.05:0,63,756	0/0:30,0:30:63.15:0,63,800	0/0:48,0:48:99:0,111,1404	0/0:42,0:42:99:0,99,1357	0/0:33,0:33:80.75:0,81,1018	0/0:17,0:17:21.85:0,22,435	0/0:20,0:20:48.14:0,48,605	0/0:23,0:23:45.02:0,45,585	0/0:50,0:50:96.14:0,96,1248	0/0:37,0:37:86.44:0,86,1055	0/0:22,0:22:54.17:0,54,698	0/0:42,0:41:92.62:0,93,1291	0/0:19,0:19:45.06:0,45,584	0/0:43,0:43:96.28:0,96,1215	0/0:21,0:21:54.12:0,54,668	0/0:17,0:17:41.35:0,41,514
chr10	102305152	.	G	GCA	4222.49	PASS	AB=0.842;AC=20;AF=0.385;AN=52;BaseQRankSum=-7.679;DP=800;FS=2.266;HRun=0;HaplotypeScore=174.6890;InbreedingCoeff=-0.0789;MQ=55.74;MQ0=12;MQRankSum=2.980;QD=7.51;ReadPosRankSum=-2.723;VQSLOD=4.2646;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:42:24.01:269,24,0	0/0:6,0:6:12.03:0,12,131	./.	./.	0/0:23,0:25:32.77:0,33,334	0/1:17,5:23:8.78:270,0,9	0/1:26,9:34:8.84:268,0,9	0/1:31,0:31:0:0,0,0	0/1:25,8:33:29.55:410,0,30	0/0:36,0:36:36.35:0,36,375	0/0:17,0:19:20.71:0,21,204	0/1:28,2:31:29.90:30,0,482	0/1:18,1:19:26.83:27,0,135	1/1:12,12:25:18.96:434,19,0	0/1:28,12:42:32.56:370,0,33	0/1:33,1:36:31.24:31,0,446	0/1:23,9:36:22.48:476,0,22	0/1:17,7:24:6.57:294,0,7	0/0:7,0:13:8.48:0,8,41	0/1:11,0:22:0:0,0,0	0/1:34,0:33:0.09:0,0,0	0/1:20,16:38:2.66:374,0,3	0/1:15,7:23:59.16:158,0,59	0/1:31,17:46:51.28:592,0,51	0/1:13,5:18:87.30:219,0,87	0/0:20,0:35:14.78:0,15,111	0/0:7,0:27:32.13:0,32,156	0/0:6,0:15:14.20:0,14,70
chr10	102305655	.	AAAC	A	2509.03	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=8.077;DP=614;FS=1.626;HRun=0;HaplotypeScore=117.8522;InbreedingCoeff=0.9917;MQ=64.03;MQ0=1;MQRankSum=-0.943;QD=13.64;ReadPosRankSum=-3.456;VQSLOD=2.6365;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:44.14:283,44,0	0/0:10,0:10:30.09:0,30,562	0/0:24,0:13:21.01:0,21,209	0/0:14,0:10:25.14:0,25,277	0/0:23,0:22:66.16:0,66,1147	0/0:25,0:25:65.59:0,66,518	0/0:24,0:24:68.87:0,69,575	1/1:23,2:25:56.84:475,57,0	0/0:21,0:21:47.65:0,48,456	0/0:23,0:23:68.34:0,68,1068	0/0:23,0:23:66.11:0,66,1025	0/0:15,0:15:45.09:0,45,645	0/0:14,0:14:35.65:0,36,493	0/0:25,0:25:64.02:0,64,474	0/0:23,0:23:50.46:0,50,410	0/0:27,0:27:78.17:0,78,1259	0/0:28,0:28:71.28:0,71,577	0/0:28,0:28:77.83:0,78,1131	1/1:30,2:32:42:438,42,0	1/1:24,3:27:69.07:506,69,0	1/1:8,0:8:14.74:91,15,0	0/0:15,0:15:43.86:0,44,330	0/0:21,0:21:59.27:0,59,481	0/0:13,0:13:32.90:0,33,263	0/0:34,0:34:91.55:0,92,726	1/1:32,0:32:16.52:438,17,0	1/1:26,1:27:44.60:394,45,0	1/1:11,0:11:15.58:91,16,0
chr10	102305656	.	AAC	A	5347.89	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=0.058;DP=607;FS=1.087;HRun=0;HaplotypeScore=96.8780;InbreedingCoeff=0.9923;MQ=64.59;MQ0=1;MQRankSum=-1.837;QD=29.71;ReadPosRankSum=-3.895;VQSLOD=5.2838;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:45.15:667,45,0	0/0:10,0:10:30.09:0,30,451	0/0:24,0:13:20.24:0,20,199	0/0:14,0:10:15.07:0,15,215	0/0:23,0:22:66.16:0,66,943	0/0:24,0:24:61.93:0,62,318	0/0:24,0:24:64.44:0,64,320	1/1:16,9:25:66:732,66,0	0/0:20,0:20:45.38:0,45,326	0/0:23,0:23:68.33:0,68,884	0/0:23,0:23:65.80:0,66,832	0/0:15,0:15:45.02:0,45,522	0/0:14,0:14:33.33:0,33,400	0/0:24,0:24:51.47:0,51,277	0/0:22,0:22:47.73:0,48,255	0/0:26,0:26:78.06:0,78,1010	0/0:29,0:29:62.01:0,62,337	0/0:28,0:28:77.32:0,77,923	1/1:8,23:31:69.62:855,70,0	1/1:16,11:27:80.78:975,81,0	1/1:1,7:8:15.01:203,15,0	0/0:15,0:15:33.58:0,34,182	0/0:22,0:22:56.25:0,56,323	0/0:13,0:13:30.90:0,31,152	0/0:34,0:34:80.40:0,80,476	1/1:1,30:31:40.15:896,40,0	1/1:20,5:25:73.50:770,74,0	1/1:1,10:11:18.04:252,18,0
chr10	102305657	.	AC	A	4301.52	PASS	AB=0.970;AC=23;AF=0.411;AN=56;BaseQRankSum=10.863;DP=602;FS=7.981;HRun=1;HaplotypeScore=89.2481;InbreedingCoeff=0.5168;MQ=63.82;MQ0=1;MQRankSum=-0.859;QD=13.44;ReadPosRankSum=1.162;VQSLOD=3.4757;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:44.98:392,45,0	0/0:10,0:10:30.08:0,30,353	0/1:21,2:12:1.56:2,0,155	0/1:13,1:10:19.51:20,0,119	0/0:23,0:22:66.15:0,66,767	0/1:23,0:23:0.29:0,0,55	0/0:24,0:24:2.64:0,3,47	1/1:24,1:25:68.93:605,69,0	0/1:19,0:19:0.52:1,0,165	0/0:24,0:24:67.76:0,68,719	0/0:22,0:22:62.81:0,63,660	0/0:17,0:17:46.23:0,46,429	0/0:14,0:14:36.11:0,36,295	0/1:24,0:24:64.50:75,0,64	0/0:22,0:22:3.33:0,3,61	0/0:26,0:26:75.61:0,76,783	0/1:26,2:28:54.44:54,0,59	0/0:28,0:28:67.97:0,68,711	1/1:26,3:29:82.47:720,82,0	1/1:25,3:28:83.92:772,84,0	1/1:7,0:7:14.96:126,15,0	0/0:15,0:15:4.21:0,4,30	0/0:23,0:23:11.68:0,12,118	0/1:12,0:12:8.86:9,0,11	0/0:34,0:34:26.82:0,27,217	1/1:31,0:31:50.60:704,51,0	1/1:23,2:25:74.26:666,74,0	1/1:11,0:11:17.99:156,18,0
chr10	102305658	.	CA	C	4301.08	PASS	AB=0.902;AC=35;AF=0.625;AN=56;BaseQRankSum=8.214;DP=601;FS=3.911;HRun=11;HaplotypeScore=90.3222;InbreedingCoeff=0.5972;MQ=63.80;MQ0=1;MQRankSum=-0.727;QD=9.78;ReadPosRankSum=3.592;VQSLOD=4.3663;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:23.80:63,24,0	0/0:11,0:11:27.06:0,27,282	0/0:24,0:13:15.22:0,15,123	0/1:14,0:10:15.95:16,0,108	0/0:22,1:22:57.14:0,57,601	1/1:5,19:24:56.91:468,57,0	1/1:3,21:24:39.64:469,40,0	1/1:25,0:25:21.26:64,21,0	0/1:7,12:19:31.02:189,0,31	0/0:23,0:24:50.95:0,51,520	0/0:21,1:22:17.46:0,17,391	0/0:17,0:17:39.09:0,39,408	0/0:14,0:14:32.63:0,33,334	1/1:3,19:23:52.96:424,53,0	1/1:3,19:22:44.77:369,45,0	0/0:25,0:26:66:0,66,684	1/1:5,22:27:59.90:492,60,0	0/1:23,3:26:7.77:8,0,540	1/1:29,0:29:2.15:53,2,0	1/1:28,0:28:31.67:106,32,0	0/1:8,0:8:7.13:7,0,14	1/1:0,13:14:40.99:326,41,0	1/1:5,18:23:15.96:338,16,0	1/1:2,11:13:13.29:227,13,0	1/1:6,25:32:67.95:548,68,0	0/1:31,0:31:23.29:37,0,23	1/1:25,0:25:10.31:78,10,0	1/1:11,0:11:7.73:21,8,0
chr10	102306932	.	G	GC	553.84	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.271;DP=496;FS=1.060;HRun=0;HaplotypeScore=296.4530;InbreedingCoeff=0.9282;MQ=52.71;MQ0=0;MQRankSum=-1.845;QD=7.80;ReadPosRankSum=-0.411;VQSLOD=3.0667;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:57.16:0,57,701	0/0:11,0:11:30.09:0,30,374	0/0:16,0:16:45.09:0,45,534	0/0:10,0:10:29.25:0,29,282	0/0:28,0:28:66.18:0,66,821	0/0:17,0:17:51.12:0,51,622	0/0:18,0:18:51.16:0,51,640	1/1:0,16:16:39.65:197,40,0	0/0:22,0:22:66.21:0,66,848	0/0:30,0:30:87.28:0,87,1117	0/0:21,0:21:51.14:0,51,642	0/0:19,0:19:57.17:0,57,695	0/0:23,0:23:69.20:0,69,850	0/0:31,0:31:92.75:0,93,1128	0/0:26,0:26:75.24:0,75,946	0/0:24,0:24:65.99:0,66,771	0/0:17,0:17:51.15:0,51,638	0/0:10,0:10:24.07:0,24,297	1/1:0,10:10:22.69:115,23,0	1/1:0,16:16:39.29:143,39,0	1/1:0,1:1:2.37:8,2,0	0/0:17,0:17:51.16:0,51,639	0/0:25,0:25:69.19:0,69,844	0/0:14,0:14:15.02:0,15,173	0/0:23,0:23:66.10:0,66,810	1/1:0,9:9:18.85:86,19,0	1/1:2,16:16:37.16:176,37,0	1/1:0,1:1:2.74:12,3,0
chr10	102306980	.	A	AGTT	6857.40	PASS	AB=0.556;AC=13;AF=0.232;AN=56;BaseQRankSum=0.326;DP=575;FS=13.222;HRun=0;HaplotypeScore=247.7614;InbreedingCoeff=0.8714;MQ=68.33;MQ0=0;MQRankSum=-8.507;QD=51.95;ReadPosRankSum=-0.463;VQSLOD=3.1171;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:51.09:0,51,789	0/0:10,0:10:27.09:0,27,449	0/0:20,0:20:47.86:0,48,740	0/0:11,0:11:24.08:0,24,400	0/0:35,0:35:90.26:0,90,1416	0/0:24,0:24:66.19:0,66,1070	0/0:15,0:15:42.14:0,42,672	1/1:13,25:38:87.26:1914,87,0	0/0:22,0:22:63.15:0,63,977	0/0:28,0:28:81.23:0,81,1309	0/0:28,0:28:75.21:0,75,1205	0/0:25,0:25:69.21:0,69,1077	0/0:19,0:19:57.19:0,57,923	0/0:23,0:23:60.16:0,60,946	0/0:22,0:22:66.23:0,66,1099	0/0:27,0:27:78.27:0,78,1288	0/0:20,0:20:54.18:0,54,879	0/0:15,0:15:39.13:0,39,650	1/1:10,17:27:51.17:1104,51,0	1/1:3,23:26:72.25:1627,72,0	1/1:3,2:6:6.02:135,6,0	0/0:21,0:21:63.20:0,63,1012	0/0:23,0:23:69.23:0,69,1110	0/0:15,0:15:42.10:0,42,664	0/0:18,0:18:54.18:0,54,887	0/1:3,12:15:7.89:791,0,8	1/1:0,18:17:51.18:1152,51,0	1/1:0,2:2:6.02:136,6,0
chr10	102307208	.	TTCCGGAGAAA	T	5777.61	PASS	AB=0.588;AC=13;AF=0.232;AN=56;BaseQRankSum=12.123;DP=650;FS=7.586;HRun=0;HaplotypeScore=200.8142;InbreedingCoeff=0.8808;MQ=86.46;MQ0=0;MQRankSum=-10.404;QD=58.36;ReadPosRankSum=-2.551;VQSLOD=3.0768;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,5772	0/0:7,0:7:21.07:0,21,1080	0/0:33,0:33:60.33:0,60,3352	0/0:19,0:18:46.33:0,46,1827	0/0:34,0:34:93.32:0,93,4461	0/0:23,0:23:66.23:0,66,3314	0/0:21,0:21:57.20:0,57,2799	1/1:4,20:24:56.78:1778,57,0	0/0:33,0:33:93.32:0,93,4700	0/0:26,0:26:75.26:0,75,3845	0/0:21,0:21:63.22:0,63,3104	0/0:29,0:29:84.29:0,84,4298	0/0:23,0:23:66.23:0,66,3172	0/0:21,0:21:63.14:0,63,2659	0/0:28,0:28:81.28:0,81,3837	0/0:35,0:35:99:0,105,5351	0/0:30,0:29:87.30:0,87,4516	0/0:25,0:25:69.24:0,69,3656	1/1:5,13:18:39.12:1146,39,0	1/1:3,17:20:39.13:1285,39,0	1/1:7,7:14:15.05:494,15,0	0/0:27,0:27:75.26:0,75,3730	0/0:27,0:27:78.27:0,78,3900	0/0:34,0:34:99:0,99,5048	0/0:15,0:15:45.15:0,45,2279	0/1:3,7:10:99:285,0,147	1/1:2,6:8:15.05:493,15,0	1/1:0,5:5:9.03:297,9,0
chr10	102307625	.	TACACAC	T	1427.85	PASS	AB=0.745;AC=25;AF=0.521;AN=48;BaseQRankSum=5.272;DP=495;FS=3.816;HRun=0;HaplotypeScore=114.9275;InbreedingCoeff=0.3980;MQ=59.68;MQ0=4;MQRankSum=-4.147;QD=6.00;ReadPosRankSum=1.517;VQSLOD=1.5728;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:33:29.23:0,29,549	0/0:6,0:6:3.01:0,3,92	./.	./.	0/0:16,0:24:5:0,5,82	0/1:14,6:21:27.48:113,0,27	0/0:15,0:18:1.04:0,1,2	./.	1/1:14,3:18:6.02:102,6,0	0/0:16,0:16:15.52:0,16,451	0/0:15,0:15:18.06:0,18,494	1/1:8,0:10:0.88:2,1,0	0/1:8,1:16:27.19:57,0,27	1/1:4,6:10:3.01:60,3,0	1/1:10,7:19:14.28:264,14,0	0/0:7,0:15:21.53:0,22,532	1/1:12,4:16:0.91:57,1,0	1/1:18,2:21:3:111,3,0	1/1:10,1:12:3.89:62,4,0	0/0:18,0:18:6.02:0,6,84	./.	1/1:8,9:18:12.04:202,12,0	1/1:10,6:16:6.02:121,6,0	1/1:13,11:24:5.98:80,6,0	1/1:10,8:19:12.04:242,12,0	0/0:19,0:19:5.97:0,6,47	0/1:14,2:17:45.42:110,0,45	0/0:9,0:13:2.14:0,2,37
chr10	102307809	.	G	GA	6197.26	PASS	AB=0.707;AC=32;AF=0.571;AN=56;BaseQRankSum=7.799;DP=595;FS=1.084;HRun=10;HaplotypeScore=90.8153;InbreedingCoeff=0.6921;MQ=71.70;MQ0=0;MQRankSum=-5.708;QD=16.89;ReadPosRankSum=-1.454;VQSLOD=4.7522;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:46.90:0,47,368	0/0:11,0:12:31.97:0,32,247	0/1:12,0:14:18.15:18,0,40	0/0:11,0:11:7.69:0,8,57	0/0:35,1:37:62.92:0,63,713	1/1:5,13:18:11.46:327,11,0	1/1:0,13:13:33.07:345,33,0	1/1:8,0:21:48.57:260,49,0	1/1:3,17:20:45.06:466,45,0	0/0:25,0:26:61.95:0,62,498	0/0:19,0:20:49.92:0,50,391	0/0:29,0:29:74.88:0,75,614	0/0:26,0:28:66.92:0,67,522	1/1:3,15:18:44.70:457,45,0	1/1:4,19:24:35.34:565,35,0	0/0:23,0:23:68.92:0,69,566	1/1:2,11:13:30.06:312,30,0	0/0:20,0:21:49.96:0,50,397	1/1:11,0:21:48.75:266,49,0	1/1:10,2:30:50.53:409,51,0	1/1:7,0:15:9.71:150,10,0	0/1:9,15:24:22.74:397,0,23	1/1:8,19:27:29.49:519,29,0	1/1:2,18:20:45.11:479,45,0	0/1:10,14:24:11.31:448,0,11	1/1:10,1:27:61.81:342,62,0	1/1:7,0:25:44.42:343,44,0	0/1:4,1:9:25.89:93,0,26
chr10	102307863	.	A	AAGTTT	14186.95	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-10.281;DP=678;FS=0.328;HRun=0;HaplotypeScore=129.4403;InbreedingCoeff=0.9944;MQ=78.73;MQ0=0;MQRankSum=-10.728;QD=75.87;ReadPosRankSum=-0.280;VQSLOD=6.4701;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1970	0/0:9,0:9:27.08:0,27,532	0/0:21,0:21:57.20:0,57,1210	0/0:17,0:16:15.70:0,16,623	0/0:24,0:24:66.21:0,66,1368	0/0:19,0:19:48.16:0,48,1008	0/0:16,0:16:42.14:0,42,895	1/1:4,22:27:75.25:2178,75,0	0/0:26,0:26:69.24:0,69,1471	0/0:28,0:28:81.28:0,81,1716	0/0:19,0:19:54.17:0,54,1111	0/0:34,0:34:93.32:0,93,1979	0/0:28,0:28:81.26:0,81,1685	0/0:23,0:23:63.20:0,63,1298	0/0:23,0:23:63.20:0,63,1303	0/0:29,0:29:84.27:0,84,1723	0/0:17,0:17:51.13:0,51,988	0/0:26,0:26:75.26:0,75,1580	1/1:4,23:29:84.28:2552,84,0	1/1:11,19:31:75.12:1959,75,0	1/1:1,31:34:87.13:2391,87,0	0/0:29,0:29:87.28:0,87,1792	0/0:23,0:23:60.21:0,60,1277	0/0:27,0:27:69.24:0,69,1471	0/0:19,0:19:57.20:0,57,1191	1/1:6,22:29:75.26:2270,75,0	1/1:1,27:29:78.26:2367,78,0	1/1:1,6:7:15.05:470,15,0
chr10	102308314	.	TA	T	1213	PASS	AB=0.538;AC=3;AF=0.054;AN=56;BaseQRankSum=6.161;DP=651;FS=5.301;HRun=1;HaplotypeScore=63.7931;InbreedingCoeff=0.6440;MQ=100.38;MQ0=0;MQRankSum=-2.551;QD=33.69;ReadPosRankSum=1.250;VQSLOD=3.2764;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1876	0/0:6,0:6:18.06:0,18,287	0/0:37,0:37:99:0,105,1659	0/0:33,0:33:96.33:0,96,1533	0/0:21,0:21:63.18:0,63,953	0/0:21,0:21:63.21:0,63,996	0/0:30,0:30:90.28:0,90,1390	0/0:32,0:32:96.32:0,96,1506	0/0:20,0:20:60.20:0,60,948	0/0:31,0:31:90.21:0,90,1327	0/0:14,0:14:39.10:0,39,553	0/0:24,0:24:60.20:0,60,959	0/0:19,0:19:57.19:0,57,906	0/0:21,0:21:63.21:0,63,997	0/0:33,0:33:96.31:0,96,1511	0/0:22,0:22:63.21:0,63,1004	0/0:21,0:21:63.16:0,63,944	0/0:15,0:15:45.15:0,45,705	0/0:19,0:19:54.17:0,54,840	0/0:17,0:17:51.09:0,51,757	0/0:25,0:25:75.19:0,75,1145	0/0:17,0:17:45.14:0,45,689	0/0:25,0:25:75.26:0,75,1193	0/0:23,0:23:69.21:0,69,1073	0/0:20,0:20:60.19:0,60,927	0/1:3,18:21:80.69:690,0,81	0/0:27,0:26:81.28:0,81,1281	1/1:0,15:15:45.15:629,45,0
chr10	102309595	.	AG	A	806.89	PASS	AB=0.844;AC=21;AF=0.375;AN=56;BaseQRankSum=0.422;DP=465;FS=0.000;HRun=12;HaplotypeScore=77.9954;InbreedingCoeff=0.2867;MQ=78.24;MQ0=0;MQRankSum=1.435;QD=3.29;ReadPosRankSum=7.318;VQSLOD=-0.7186;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:17.43:0,17,124	0/0:2,0:2:0:0,0,0	0/1:20,2:19:68.02:68,0,104	0/1:17,1:16:10.97:11,0,106	0/1:10,1:12:5.59:37,0,6	0/0:11,0:11:11.80:0,12,78	0/0:18,0:36:18.15:0,18,125	1/1:6,7:13:20.89:162,21,0	0/0:15,0:15:19.50:0,19,121	0/1:12,1:13:11.21:11,0,79	0/1:13,2:15:2.22:2,0,144	0/0:19,0:20:3.89:0,4,115	0/1:8,4:12:11.23:11,0,72	0/0:17,0:18:17.78:0,18,135	0/0:10,0:20:11.74:0,12,76	0/1:19,3:22:33.67:34,0,217	0/0:25,0:25:31.02:0,31,172	1/1:9,0:24:38.22:110,38,0	0/1:7,7:15:4.95:95,0,5	1/1:8,1:12:8.84:41,9,0	1/1:21,12:38:26.49:164,26,0	0/0:5,0:5:0:0,0,0	0/0:8,0:7:5.95:0,6,44	0/0:18,0:28:14.79:0,15,77	0/0:3,0:10:0:0,0,0	1/1:13,3:17:15.79:104,16,0	1/1:2,5:7:14.94:116,15,0	0/1:3,2:5:14.24:14,0,44
chr10	102310320	.	GA	G	2919.15	PASS	AB=0.801;AC=32;AF=0.571;AN=56;BaseQRankSum=7.790;DP=634;FS=13.163;HRun=14;HaplotypeScore=72.3522;InbreedingCoeff=0.4685;MQ=73.38;MQ0=3;MQRankSum=0.919;QD=6.24;ReadPosRankSum=4.962;VQSLOD=1.0472;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,20:35:25.89:267,26,0	0/0:11,0:13:26.03:0,26,259	0/1:40,1:24:9.07:9,0,144	0/1:14,1:11:25.11:25,0,50	0/0:12,1:13:6.41:0,6,190	1/1:7,11:19:28.09:206,28,0	1/1:10,19:31:53.08:344,53,0	1/1:8,11:22:37.03:224,37,0	0/1:4,8:13:7.99:89,0,8	0/0:23,1:24:36.03:0,36,331	0/1:20,3:25:3.65:4,0,233	0/0:27,0:31:49.04:0,49,428	0/0:18,0:20:37.97:0,38,350	1/1:6,11:18:25.77:170,26,0	1/1:7,18:27:45.50:299,46,0	0/1:19,4:24:6.14:6,0,363	1/1:6,16:23:28.70:191,29,0	0/0:18,1:21:17.97:0,18,313	0/1:19,3:23:12.98:13,0,321	0/0:19,1:20:19.29:0,19,295	0/1:16,3:22:3.30:3,0,247	1/1:4,10:14:20.74:144,21,0	1/1:2,11:17:34.85:207,35,0	1/1:7,27:38:71.39:470,71,0	0/1:7,9:19:25.97:111,0,26	1/1:14,9:25:5.80:166,6,0	0/0:24,0:24:54.52:0,55,498	1/1:3,10:13:16.27:172,16,0
chr10	102311371	.	TA	T	7853.82	PASS	AB=0.743;AC=38;AF=0.679;AN=56;BaseQRankSum=9.851;DP=656;FS=0.366;HRun=11;HaplotypeScore=71.3369;InbreedingCoeff=0.8151;MQ=72.52;MQ0=1;MQRankSum=0.172;QD=15.90;ReadPosRankSum=1.613;VQSLOD=5.6886;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:34:59.07:171,59,0	0/0:13,0:14:35.92:0,36,366	0/0:10,0:10:12.03:0,12,124	0/0:10,0:11:6.13:0,6,89	0/0:30,0:30:61.69:0,62,618	1/1:5,32:38:89.87:739,90,0	1/1:2,20:22:47.92:394,48,0	1/1:10,23:33:65.66:530,66,0	1/1:4,27:31:59.91:493,60,0	0/0:40,1:41:68.55:0,69,914	0/1:17,2:19:4.18:4,0,371	0/0:17,1:18:17.46:0,17,391	0/0:14,2:16:17.45:0,17,384	0/1:7,18:25:6.92:275,0,7	1/1:3,18:23:49.01:381,49,0	0/0:19,3:22:4.81:0,5,447	1/1:2,20:24:61.01:480,61,0	1/1:1,20:22:58.96:474,59,0	1/1:3,15:18:44.91:366,45,0	1/1:7,25:32:52.10:590,52,0	1/1:3,13:17:9.01:269,9,0	1/1:4,23:27:30.91:461,31,0	1/1:5,14:20:34.97:277,35,0	1/1:3,16:19:44.93:369,45,0	1/1:1,17:19:46.98:375,47,0	1/1:6,28:35:79.89:646,80,0	1/1:4,20:24:27.94:436,28,0	1/1:3,8:11:14.96:123,15,0
chr10	102314862	.	GC	G	828.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.931;DP=655;FS=13.210;HRun=1;HaplotypeScore=60.4570;InbreedingCoeff=0.9997;MQ=91.04;MQ0=0;MQRankSum=-4.547;QD=34.50;ReadPosRankSum=1.082;VQSLOD=2.3550;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1817	0/0:16,0:16:48.16:0,48,766	0/0:18,0:18:54.18:0,54,839	0/0:33,0:33:99:0,99,1516	0/0:30,0:30:90.31:0,90,1439	0/0:27,0:27:81.28:0,81,1292	0/0:28,0:28:84.25:0,84,1286	0/0:30,0:30:90.30:0,90,1419	0/0:33,0:33:99:0,99,1580	0/0:24,0:24:69.24:0,69,1101	0/0:15,0:15:45.14:0,45,688	0/0:18,0:18:54.17:0,54,840	0/0:28,0:28:84.25:0,84,1312	0/0:18,0:18:54.17:0,54,840	0/0:27,0:27:81.26:0,81,1270	0/0:23,0:23:69.20:0,69,1056	0/0:25,0:25:75.26:0,75,1199	1/1:0,24:24:66.22:923,66,0	0/0:24,0:24:69.24:0,69,1097	0/0:16,0:16:48.16:0,48,767	0/0:31,0:31:93.29:0,93,1439	0/0:18,0:18:54.16:0,54,817	0/0:14,0:14:42.14:0,42,671	0/0:27,0:27:81.26:0,81,1266	0/0:13,0:13:36.12:0,36,576	0/0:16,0:16:48.15:0,48,745	0/0:29,0:29:84.26:0,84,1288	0/0:12,0:12:36.12:0,36,576
chr10	102318579	.	GCA	G	9182.16	PASS	AB=0.920;AC=43;AF=0.768;AN=56;BaseQRankSum=7.503;DP=716;FS=6.068;HRun=0;HaplotypeScore=94.8972;InbreedingCoeff=0.4696;MQ=68.04;MQ0=7;MQRankSum=0.443;QD=14.67;ReadPosRankSum=4.492;VQSLOD=4.4552;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:23,41:65:80.85:1228,81,0	0/0:6,0:6:12.03:0,12,167	0/0:34,0:23:21.03:0,21,250	0/0:35,0:30:37.18:0,37,462	0/1:15,1:16:5.23:5,0,354	1/1:4,9:16:26.58:254,27,0	1/1:13,22:36:60.01:685,60,0	1/1:13,10:26:16.70:279,17,0	1/1:10,24:35:9.52:545,10,0	0/1:25,1:27:25.92:26,0,489	0/0:14,0:14:24.08:0,24,375	0/1:27,3:30:45.82:46,0,669	0/1:20,2:22:22.47:22,0,584	1/1:10,15:28:47.64:501,48,0	1/1:11,20:31:42.12:494,42,0	0/1:25,2:28:36.67:37,0,510	1/1:5,32:38:68.70:790,69,0	1/1:5,16:21:42.12:494,42,0	1/1:5,10:16:32.89:337,33,0	1/1:5,9:14:27.07:303,27,0	1/1:10,17:30:56.50:583,56,0	1/1:9,9:17:21.06:247,21,0	1/1:6,4:10:9.02:101,9,0	1/1:12,28:44:83.41:882,83,0	1/1:5,4:10:14.88:155,15,0	1/1:9,16:26:1.65:446,2,0	1/1:5,12:21:47.47:479,47,0	1/1:6,9:15:17.03:241,17,0
chr10	102318911	.	G	GTT	3794.84	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=7.444;DP=431;FS=0.000;HRun=10;HaplotypeScore=82.8100;InbreedingCoeff=0.7744;MQ=57.98;MQ0=14;MQRankSum=-4.279;QD=15.81;ReadPosRankSum=-0.934;VQSLOD=1.8912;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,5:20:40.73:484,41,0	0/0:5,0:5:9.01:0,9,91	0/0:43,0:11:5.60:0,6,44	0/1:36,0:9:8.97:9,0,27	0/0:17,0:17:39.08:0,39,396	1/1:13,0:12:12.91:124,13,0	1/1:7,0:6:6.02:65,6,0	0/0:23,0:21:32.04:0,32,333	1/1:8,5:13:20.79:343,21,0	0/0:15,0:15:32.80:0,33,385	0/0:15,0:15:41.82:0,42,395	0/0:10,0:10:23.95:0,24,229	0/0:8,0:8:21.04:0,21,213	1/1:5,2:8:15.89:166,16,0	1/1:17,4:22:33.82:372,34,0	0/0:6,0:6:12.01:0,12,122	1/1:10,5:14:26.82:342,27,0	1/1:8,6:11:24.40:279,24,0	0/0:18,0:17:33.93:0,34,337	0/0:18,0:19:2.80:0,3,152	0/0:10,0:10:14.98:0,15,144	1/1:6,0:6:6.18:58,6,0	1/1:6,3:10:29.79:333,30,0	1/1:8,2:10:14.03:147,14,0	1/1:13,8:20:48.43:630,48,0	1/1:15,1:16:21.05:215,21,0	0/1:12,0:12:12.49:12,0,38	1/1:11,0:10:24.01:214,24,0
chr10	102318918	.	T	TTTTTG	6155.77	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=6.782;DP=415;FS=2.879;HRun=0;HaplotypeScore=91.5835;InbreedingCoeff=0.7359;MQ=55.04;MQ0=14;MQRankSum=-4.710;QD=24.43;ReadPosRankSum=-0.399;VQSLOD=4.6098;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:27.30:237,27,0	0/0:4,0:4:12.02:0,12,165	0/0:40,0:8:8.43:0,8,65	0/1:33,0:7:5.08:5,0,30	0/0:15,0:15:39.13:0,39,729	1/1:6,0:12:15.05:324,15,0	1/1:0,1:6:6.02:140,6,0	0/0:22,0:19:1.53:0,2,357	1/1:14,0:13:32.54:481,33,0	0/0:19,0:18:51:0,51,732	0/0:15,0:15:44.98:0,45,619	0/0:9,0:9:21.37:0,21,392	0/0:7,0:7:21.04:0,21,315	1/1:8,0:8:23.38:269,23,0	1/1:16,0:15:43.65:533,44,0	0/0:6,0:6:17.98:0,18,232	1/1:17,0:16:31.77:379,32,0	1/1:14,0:11:28.59:405,29,0	0/0:16,0:15:21.53:0,22,285	0/1:19,0:19:99:168,0,158	0/0:9,0:9:13.77:0,14,140	1/1:4,0:5:9.47:80,9,0	1/1:13,0:13:32.66:543,33,0	1/1:11,0:10:17.89:212,18,0	1/1:23,0:22:56.10:819,56,0	1/1:4,13:17:39.09:838,39,0	0/1:10,0:10:7.55:26,0,8	1/1:1,10:10:24.08:698,24,0
chr10	102318934	.	G	GGTTTTTT	1996.55	PASS	AB=0.808;AC=17;AF=0.304;AN=56;BaseQRankSum=6.767;DP=373;FS=5.309;HRun=0;HaplotypeScore=113.7677;InbreedingCoeff=-0.2227;MQ=58.45;MQ0=7;MQRankSum=-5.296;QD=8.68;ReadPosRankSum=3.004;VQSLOD=1.6523;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:37.65:105,0,38	0/0:3,0:3:9.03:0,9,242	0/0:21,0:7:3.44:0,3,151	0/1:25,0:8:1.44:1,0,39	0/0:15,0:17:48.15:0,48,1117	0/1:9,0:10:0.71:1,0,133	0/0:6,0:5:10.26:0,10,100	0/1:21,0:18:99:157,0,122	0/1:5,0:14:70.25:70,0,110	0/0:18,0:19:54.01:0,54,1202	0/0:13,0:13:34.54:0,35,869	0/0:10,0:10:27.02:0,27,653	0/0:8,0:8:20.90:0,21,363	0/1:4,0:10:22.63:97,0,23	0/1:6,0:11:61.06:61,0,109	0/0:7,0:9:26.91:0,27,284	0/1:7,0:17:82.40:82,0,84	0/1:13,0:12:4.44:4,0,182	0/1:12,0:11:24.76:111,0,25	0/1:16,0:19:3.48:789,0,3	0/1:6,0:6:29.70:30,0,45	0/0:3,0:9:2.33:0,2,128	0/1:4,0:13:51.80:116,0,52	0/1:3,0:9:41.08:67,0,41	0/1:8,0:18:80.10:117,0,80	0/0:14,0:15:17.76:0,18,300	1/1:2,1:11:13.03:342,13,0	0/0:11,0:10:29.30:0,29,249
chr10	102318937	.	T	TG	844.05	PASS	AB=0.982;AC=15;AF=0.268;AN=56;BaseQRankSum=6.655;DP=363;FS=4.241;HRun=0;HaplotypeScore=79.0786;InbreedingCoeff=0.3126;MQ=59.06;MQ0=4;MQRankSum=-3.364;QD=6.12;ReadPosRankSum=0.651;VQSLOD=3.1645;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:22.29:0,22,142	0/0:4,0:4:12.03:0,12,152	0/0:21,0:6:6.72:0,7,122	0/0:24,0:8:0.76:0,1,72	0/0:17,0:17:48.08:0,48,611	0/1:11,0:10:13.53:14,0,79	0/0:6,0:5:9.08:0,9,90	0/0:20,0:17:29.20:0,29,287	1/1:11,0:11:22.46:111,22,0	0/0:19,0:19:54.13:0,54,701	0/0:12,0:12:32.91:0,33,458	0/0:10,0:10:30.08:0,30,388	0/0:8,0:8:23.98:0,24,275	0/1:10,0:10:20.64:22,0,21	0/1:13,0:12:43.30:80,0,43	0/0:9,0:9:21.78:0,22,257	0/1:17,1:17:4.67:130,0,5	1/1:4,5:11:32.88:332,33,0	0/0:11,0:11:26.49:0,26,221	0/0:19,0:19:30.07:0,30,233	0/0:7,0:7:12.38:0,12,89	0/1:9,0:9:23:23,0,66	0/1:12,1:13:41.17:69,0,41	1/1:8,0:8:7.28:48,7,0	1/1:16,1:16:17.80:163,18,0	0/1:16,0:16:26.62:27,0,126	0/0:11,0:11:8.70:0,9,39	0/0:11,0:10:21.11:0,21,126
chr10	102320098	.	GT	G	3984.71	PASS	AB=0.669;AC=24;AF=0.429;AN=56;BaseQRankSum=3.994;DP=636;FS=4.233;HRun=13;HaplotypeScore=69.1897;InbreedingCoeff=0.4321;MQ=70.78;MQ0=1;MQRankSum=-0.773;QD=10.14;ReadPosRankSum=6.188;VQSLOD=3.1285;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,33:44:2.09:467,0,2	0/0:5,0:11:17.54:0,18,130	0/1:20,2:17:4.53:5,0,158	0/0:10,0:9:5.83:0,6,33	0/0:22,0:23:44.84:0,45,397	1/1:7,15:22:32.78:241,33,0	1/1:10,19:30:14.58:261,15,0	0/0:26,1:28:1.14:0,1,333	1/1:5,9:14:22.97:173,23,0	0/0:28,1:29:19.17:0,19,324	0/0:12,1:13:8.03:0,8,223	0/0:18,0:20:26.88:0,27,248	0/0:17,1:18:23.15:0,23,378	1/1:3,14:17:35.79:262,36,0	0/1:7,26:35:31.28:350,0,31	0/0:15,0:18:25.26:0,25,348	1/1:9,22:33:37.51:419,38,0	1/1:3,12:15:3.21:189,3,0	0/0:23,0:27:65.29:0,65,558	0/0:19,0:22:31.64:0,32,387	0/0:21,0:23:38.21:0,38,397	1/1:2,24:26:62.58:459,63,0	0/1:6,11:19:3.73:191,0,4	1/1:4,20:24:24.46:343,24,0	0/1:6,18:26:59.15:260,0,59	0/1:13,13:26:27.20:234,0,27	0/1:21,3:25:2.11:2,0,414	0/1:3,10:14:14.88:130,0,15
chr10	102320367	.	TAA	T	2266.80	PASS	AB=0.678;AC=24;AF=0.429;AN=56;BaseQRankSum=-1.004;DP=629;FS=1.282;HRun=17;HaplotypeScore=82.7679;InbreedingCoeff=0.4262;MQ=75.94;MQ0=9;MQRankSum=-0.075;QD=6.71;ReadPosRankSum=4.954;VQSLOD=0.1072;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,2:26:6.65:7,0,142	0/0:12,0:13:28.92:0,29,297	0/0:56,0:23:16.99:0,17,132	0/0:29,0:13:11.62:0,12,88	0/0:24,0:30:54.66:0,55,488	0/1:6,8:16:15.09:145,0,15	1/1:2,6:11:20.23:174,20,0	0/1:26,2:43:20.20:20,0,243	1/1:4,15:21:29.63:213,30,0	0/0:27,0:31:62.19:0,62,585	0/0:20,0:22:46.87:0,47,446	0/0:25,0:28:54.95:0,55,567	0/0:16,0:16:37.78:0,38,402	1/1:5,10:19:32.76:274,33,0	1/1:5,17:25:29.25:252,29,0	0/0:22,1:24:1.76:0,2,349	1/1:5,27:33:70.70:531,71,0	0/1:11,3:16:38.32:50,0,38	0/0:12,0:16:10.92:0,11,69	0/0:8,0:17:28.35:0,28,205	0/1:1,1:4:8.29:17,0,8	0/1:4,2:7:6.19:37,0,6	1/1:7,7:16:20.02:192,20,0	1/1:3,13:18:20.29:181,20,0	1/1:9,11:26:22.37:329,22,0	0/1:13,2:28:2.23:2,0,156	0/1:9,3:27:38.44:38,0,88	0/0:5,0:6:4.87:0,5,17
chr10	102320776	.	T	TCAC	3665.16	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=12.332;DP=684;FS=0.440;HRun=0;HaplotypeScore=95.8853;InbreedingCoeff=-0.0670;MQ=66.41;MQ0=21;MQRankSum=1.584;QD=9.35;ReadPosRankSum=-2.784;VQSLOD=2.7270;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:62.71:0,63,681	0/0:5,0:5:15:0,15,157	0/0:33,0:17:5.97:0,6,45	0/0:38,0:24:23.96:0,24,207	0/0:16,0:16:23.47:0,23,211	0/1:18,0:17:41.64:246,0,42	0/1:29,0:29:63.95:64,0,211	0/0:25,0:23:35.79:0,36,290	0/1:26,0:26:80.84:176,0,81	0/0:23,0:22:50.47:0,50,606	0/0:15,0:15:24.04:0,24,284	0/0:29,0:28:48.09:0,48,587	0/0:20,0:20:35.94:0,36,422	0/1:23,0:23:9.77:312,0,10	0/1:34,0:34:91.70:332,0,92	0/0:38,0:38:69.10:0,69,811	0/1:46,0:46:81.23:686,0,81	0/0:18,0:18:21.92:0,22,401	1/1:16,0:15:0.89:2,1,0	0/1:20,0:20:78.22:78,0,121	0/1:36,0:34:48.56:372,0,49	0/1:21,0:21:5.30:5,0,191	0/1:13,0:13:12.41:93,0,12	0/1:36,0:36:99:487,0,163	0/1:24,0:22:97.48:114,0,97	1/1:6,9:14:0.10:338,0,0	1/1:25,0:25:8.14:302,8,0	1/1:2,8:9:3.01:60,3,0
chr10	102320797	.	C	CCAT	7402.86	PASS	AB=0.849;AC=31;AF=0.554;AN=56;BaseQRankSum=-10.319;DP=758;FS=10.385;HRun=0;HaplotypeScore=89.8995;InbreedingCoeff=0.7405;MQ=59.44;MQ0=18;MQRankSum=1.631;QD=14.43;ReadPosRankSum=4.038;VQSLOD=3.5498;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:63.04:0,63,685	0/0:6,0:6:12.03:0,12,150	0/0:26,0:13:20.65:0,21,177	0/0:33,0:22:11.86:0,12,142	0/0:16,0:16:29.04:0,29,278	1/1:3,21:25:24.08:477,24,0	1/1:10,27:38:9.03:179,9,0	1/1:40,0:37:14.14:456,14,0	1/1:7,23:30:18.06:358,18,0	0/0:25,0:24:50.25:0,50,631	0/0:16,0:14:23.42:0,23,266	0/0:21,0:20:48.12:0,48,616	0/0:20,0:20:48.05:0,48,531	1/1:3,19:23:30.10:595,30,0	0/1:6,27:35:5.50:620,0,5	0/0:31,0:31:75.20:0,75,959	1/1:10,39:49:66.23:1312,66,0	0/0:19,0:19:35.99:0,36,405	1/1:20,0:20:29.27:224,29,0	1/1:10,21:30:35.58:345,36,0	1/1:10,38:46:36.12:715,36,0	1/1:14,19:33:2.75:59,3,0	1/1:3,9:12:8.70:179,9,0	1/1:10,35:45:48.16:954,48,0	1/1:8,12:19:12.04:238,12,0	0/1:29,0:28:99:128,0,371	1/1:1,20:22:27.09:537,27,0	0/1:11,0:10:19.86:28,0,20
chr10	102321512	.	G	GGA	900.08	PASS	AB=0.807;AC=31;AF=0.620;AN=50;BaseQRankSum=2.201;DP=580;FS=32.497;HRun=0;HaplotypeScore=79.5527;InbreedingCoeff=0.2489;MQ=62.69;MQ0=7;MQRankSum=-1.140;QD=2.14;ReadPosRankSum=-0.656;VQSLOD=0.0713;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:29:9:79,9,0	0/0:4,0:4:5.75:0,6,45	./.	./.	0/0:18,0:18:11.93:0,12,107	0/1:14,5:19:0:0,0,0	1/1:17,8:25:3.01:45,3,0	1/1:27,0:25:2.13:5,2,0	1/1:14,0:21:2.60:44,3,0	0/0:18,0:18:7.73:0,8,64	0/0:8,0:8:3:0,3,27	0/0:21,0:22:11.54:0,12,90	0/1:10,0:24:23.51:43,0,24	0/1:14,8:22:17.38:38,0,17	0/1:19,7:27:71.32:71,0,80	0/0:25,0:26:20.83:0,21,201	1/1:11,7:18:6.02:89,6,0	0/1:18,0:17:2.40:48,0,2	1/1:17,0:17:8.48:59,8,0	./.	1/1:28,0:27:11.70:113,12,0	1/1:9,1:10:2.96:19,3,0	1/1:20,0:20:10.97:74,11,0	0/1:18,9:27:52.99:77,0,53	0/1:20,0:20:17.13:111,0,17	1/1:30,0:30:14.72:65,15,0	1/1:12,0:22:3:26,3,0	1/1:12,0:12:13.23:52,13,0
chr10	102322960	.	A	ATCTGTCTG	2391.04	PASS	AB=0.962;AC=18;AF=0.321;AN=56;BaseQRankSum=-1.467;DP=661;FS=4.797;HRun=0;HaplotypeScore=221.7722;InbreedingCoeff=-0.0543;MQ=65.68;MQ0=4;MQRankSum=-3.144;QD=5.95;ReadPosRankSum=1.117;VQSLOD=2.2944;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:21:29.23:123,0,29	0/0:14,0:14:33.10:0,33,568	0/0:15,0:13:24.08:0,24,437	0/0:23,0:22:29.28:0,29,623	0/0:25,0:25:59.67:0,60,980	0/0:18,0:18:13.18:0,13,164	0/0:17,0:17:0.78:0,1,2	1/1:42,0:38:9.77:71,10,0	0/1:22,0:21:33.35:33,0,132	0/0:33,0:33:81.20:0,81,1581	0/0:17,0:17:42.14:0,42,832	0/0:23,0:23:36.11:0,36,600	0/0:22,0:22:39.13:0,39,705	0/1:28,0:27:15.01:15,0,180	0/1:27,0:24:15.63:16,0,43	0/0:33,0:33:69.24:0,69,1294	0/1:7,0:7:0.07:0,0,0	0/1:18,0:18:50.71:452,0,51	0/1:17,0:17:48.01:48,0,150	0/0:19,0:19:11:0,11,208	0/1:39,0:39:66.49:66,0,311	0/1:24,0:24:3.16:3,0,146	0/1:26,0:25:13.43:13,0,57	0/1:12,0:12:1.81:2,0,11	0/1:26,0:26:17.65:18,0,234	1/1:32,1:31:65.68:1315,66,0	0/1:32,0:33:6.77:7,0,408	0/1:3,19:24:43.34:368,0,43
chr10	102322972	.	GTCTA	G	2602.33	PASS	AB=1.000;AC=34;AF=0.654;AN=52;BaseQRankSum=5.815;DP=662;FS=5.940;HRun=0;HaplotypeScore=177.5309;InbreedingCoeff=0.4966;MQ=57.49;MQ0=11;MQRankSum=-2.785;QD=6.44;ReadPosRankSum=1.777;VQSLOD=2.5056;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:20.71:0,21,330	1/1:8,5:13:9.03:139,9,0	./.	./.	1/1:14,13:27:19.31:281,19,0	1/1:15,0:15:20.93:181,21,0	1/1:16,0:16:1.25:21,1,0	0/0:43,0:36:20.54:0,21,126	1/1:23,0:22:26.78:209,27,0	0/0:32,0:32:45.12:0,45,785	0/0:21,0:21:30.05:0,30,413	1/1:11,8:19:6.02:93,6,0	1/1:12,9:21:12.04:186,12,0	1/1:26,0:25:29.92:251,30,0	1/1:25,0:23:15.01:138,15,0	1/1:14,20:34:30.10:464,30,0	1/1:8,0:8:2.99:23,3,0	0/1:19,0:19:38.47:38,0,163	0/1:18,0:17:28.90:29,0,176	0/1:21,0:20:49.07:49,0,270	0/0:42,0:41:3.38:0,3,499	1/1:22,0:22:32.88:283,33,0	1/1:24,0:23:11.99:103,12,0	1/1:12,0:12:2.87:28,3,0	1/1:30,0:29:27.02:249,27,0	0/0:42,0:38:71.72:0,72,765	0/1:31,0:30:21.32:21,0,543	0/0:27,0:24:6.77:0,7,208
chr10	102322975	.	TATCTATC	T	2239.15	PASS	AB=0.835;AC=10;AF=0.179;AN=56;BaseQRankSum=12.595;DP=656;FS=17.473;HRun=0;HaplotypeScore=210.2166;InbreedingCoeff=-0.2159;MQ=54.91;MQ0=12;MQRankSum=-6.726;QD=11.79;ReadPosRankSum=4.339;VQSLOD=1.4197;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:21:30.90:0,31,923	0/0:13,0:13:33.09:0,33,443	0/0:10,0:8:24.08:0,24,311	0/0:15,0:14:33.99:0,34,420	0/0:26,0:26:55.35:0,55,717	0/1:9,7:16:22.91:307,0,23	0/1:14,0:14:15.37:15,0,122	0/0:47,0:38:99:0,111,1640	0/1:14,8:21:77.41:312,0,77	0/0:31,0:31:93.20:0,93,2327	0/0:22,0:22:57.19:0,57,1502	0/0:18,0:18:36.10:0,36,469	0/0:19,0:19:39.10:0,39,485	0/1:18,7:24:49.79:358,0,50	0/1:18,3:20:83.22:226,0,83	0/0:35,0:35:72.17:0,72,882	0/1:6,0:6:12.50:12,0,63	0/0:19,0:19:47.01:0,47,788	0/0:20,0:18:45.62:0,46,897	0/0:21,0:20:48:0,48,972	0/0:42,0:41:99:0,105,2069	0/1:13,8:21:41.25:472,0,41	0/1:20,4:23:71.93:208,0,72	0/1:10,1:11:37.55:38,0,45	0/1:21,9:29:91.31:436,0,91	0/0:44,0:40:99:0,117,2872	0/0:35,0:34:76.05:0,76,1829	0/0:25,0:22:11.88:0,12,497
chr10	102323017	.	TCTAC	T	1596.83	PASS	AB=0.993;AC=17;AF=0.327;AN=52;BaseQRankSum=2.727;DP=567;FS=4.457;HRun=0;HaplotypeScore=164.3695;InbreedingCoeff=-0.1735;MQ=48.59;MQ0=17;MQRankSum=-2.356;QD=4.56;ReadPosRankSum=-0.189;VQSLOD=2.0349;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:19:41.90:0,42,533	1/1:5,0:5:8.89:61,9,0	./.	./.	0/1:24,0:24:77.69:78,0,237	0/1:13,0:13:15.29:15,0,70	0/0:7,0:7:7.11:0,7,50	1/1:18,38:52:14.84:843,15,0	0/1:24,0:23:4.25:4,0,165	0/0:30,0:30:75.08:0,75,1092	0/0:18,0:18:32.90:0,33,528	0/0:21,0:21:4.09:0,4,289	0/1:15,0:15:56.79:57,0,88	0/1:19,0:19:34.12:34,0,72	0/1:26,0:25:1.75:2,0,150	0/1:29,0:29:99:157,0,193	0/0:8,0:7:13.41:0,13,85	0/0:13,0:13:28:0,28,335	0/1:14,0:12:99:120,0,132	0/1:17,1:17:99:132,0,166	0/1:24,0:23:95.65:96,0,218	0/1:26,0:25:19.85:20,0,161	0/0:14,0:13:10.07:0,10,147	0/0:9,0:9:0:0,0,60	0/1:29,0:28:19.28:19,0,186	0/0:38,0:34:44.15:0,44,1224	0/1:27,1:26:99:112,0,264	0/0:17,0:13:17.47:0,17,328
chr10	102323044	.	C	CTCTA	8023.03	PASS	AB=1.000;AC=29;AF=0.580;AN=50;BaseQRankSum=-1.199;DP=561;FS=12.934;HRun=0;HaplotypeScore=132.1909;InbreedingCoeff=0.8646;MQ=50.73;MQ0=14;MQRankSum=-1.424;QD=24.76;ReadPosRankSum=-2.027;VQSLOD=3.3700;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:21:39.09:0,39,604	0/0:2,0:2:3:0,3,25	0/0:16,0:4:5.85:0,6,63	./.	0/0:25,0:25:54.11:0,54,824	1/1:7,8:14:27.01:582,27,0	1/1:2,9:11:15.05:365,15,0	1/1:37,0:36:6.86:49,7,0	1/1:5,20:28:48.16:1166,48,0	0/0:33,0:32:75.24:0,75,1164	0/0:17,0:17:39.10:0,39,564	0/0:21,0:21:51.17:0,51,833	0/0:14,0:14:30.10:0,30,489	1/1:6,15:21:39.13:923,39,0	1/1:5,23:27:36.12:877,36,0	0/0:30,0:30:54.17:0,54,855	1/1:9,2:10:12:192,12,0	0/0:15,0:15:30.05:0,30,438	./.	1/1:14,0:13:8.96:70,9,0	./.	1/1:10,18:28:36.12:878,36,0	1/1:8,16:23:48.16:1134,48,0	1/1:3,7:11:12.04:292,12,0	1/1:15,22:36:54.19:1315,54,0	1/1:27,0:24:21.33:157,21,0	1/1:17,0:15:2.98:21,3,0	0/1:13,0:9:0.07:0,0,0
chr10	102323110	.	GTATCTATCTATCTATCTATC	G	547.76	PASS	AB=0.667;AC=3;AF=0.058;AN=52;BaseQRankSum=1.909;DP=639;FS=0.967;HRun=0;HaplotypeScore=375.0235;InbreedingCoeff=0.4699;MQ=50.21;MQ0=8;MQRankSum=0.956;QD=13.36;ReadPosRankSum=0.744;VQSLOD=0.6488;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:17:27.09:0,27,606	0/0:5,0:5:9.02:0,9,397	./.	./.	0/0:30,0:30:63.21:0,63,3041	0/0:17,0:16:18.05:0,18,325	0/0:12,0:11:6.02:0,6,120	0/0:60,0:52:17.07:0,17,189	0/0:34,0:35:24.08:0,24,474	0/0:40,0:40:66.22:0,66,2374	0/0:23,0:23:42.14:0,42,1871	0/0:19,0:19:42.14:0,42,2054	0/0:21,0:21:45.15:0,45,2273	0/0:24,0:23:21.02:0,21,354	0/0:30,0:29:33.10:0,33,646	0/0:28,0:28:48.16:0,48,2892	0/0:16,0:15:20.16:0,20,566	0/0:21,0:21:22.55:0,23,313	0/0:9,0:9:18.04:0,18,275	0/0:27,0:43:20.30:0,20,441	0/0:9,0:8:8.95:0,9,156	0/0:22,0:22:35.93:0,36,666	0/0:38,0:37:29.92:0,30,498	0/0:10,0:11:9.03:0,9,113	0/0:35,0:35:39.03:0,39,1084	0/1:16,16:30:99:470,0,206	0/0:15,0:16:36.07:0,36,486	1/1:9,0:6:9.03:174,9,0
chr10	102323118	.	C	CTATG	2289.43	PASS	AB=0.967;AC=15;AF=0.278;AN=54;BaseQRankSum=9.020;DP=626;FS=19.781;HRun=0;HaplotypeScore=196.0713;InbreedingCoeff=0.4658;MQ=48.72;MQ0=9;MQRankSum=1.231;QD=9.83;ReadPosRankSum=2.739;VQSLOD=1.8756;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:35.91:0,36,303	0/0:6,0:6:18:0,18,211	0/0:6,0:2:2.99:0,3,24	./.	0/0:29,0:29:87.03:0,87,1098	1/1:19,0:16:10.17:255,10,0	1/1:11,0:11:9.60:87,10,0	0/0:56,0:47:99:0,140,1089	1/1:33,0:33:33.05:278,33,0	0/0:38,0:37:99:0,107,1183	0/0:22,0:22:63.04:0,63,778	0/0:20,0:20:60.07:0,60,801	0/0:20,0:20:54.06:0,54,743	1/1:19,1:19:32.75:271,33,0	0/1:26,3:28:21.19:301,0,21	0/0:26,0:26:51.12:0,51,906	0/1:18,0:16:19.75:70,0,20	0/0:19,0:18:23.48:0,23,264	0/0:11,0:11:7.31:0,7,149	0/0:45,0:42:81.60:0,82,586	0/0:9,0:8:8.78:0,9,67	0/1:22,0:22:20.82:352,0,21	0/1:35,3:37:20.99:379,0,21	1/1:10,0:10:8.93:69,9,0	0/1:32,0:32:14.85:404,0,15	0/0:33,0:30:62.57:0,63,468	0/0:19,0:18:44.78:0,45,352	0/0:12,0:9:16.44:0,16,111
chr10	102323209	.	C	CTCTA	2824.25	PASS	AB=0.925;AC=30;AF=0.577;AN=52;BaseQRankSum=1.123;DP=625;FS=17.700;HRun=0;HaplotypeScore=149.8795;InbreedingCoeff=0.5114;MQ=47.43;MQ0=33;MQRankSum=-1.536;QD=7.89;ReadPosRankSum=-1.449;VQSLOD=1.1520;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,3:18:3.90:247,4,0	0/0:15,0:15:27.08:0,27,397	./.	./.	0/1:16,12:28:99:417,0,327	1/1:17,0:18:8.52:161,9,0	1/1:11,0:7:4.94:108,5,0	0/0:32,0:22:3:0,3,29	1/1:18,1:21:9.03:174,9,0	0/0:28,0:28:51.15:0,51,719	0/0:26,0:26:45.15:0,45,693	0/0:17,0:17:24.07:0,24,351	0/0:23,0:23:41.67:0,42,647	0/0:24,0:24:0.70:0,1,2	1/1:18,0:19:11.93:181,12,0	0/0:25,0:25:39.11:0,39,574	1/1:18,0:19:8.21:115,8,0	1/1:9,0:9:6.49:28,6,0	1/1:14,4:11:12.04:252,12,0	0/0:42,0:42:12.81:0,13,930	0/1:8,0:7:21.54:22,0,129	1/1:18,7:25:23.99:473,24,0	1/1:22,0:27:13.90:126,14,0	1/1:17,0:16:5.95:73,6,0	1/1:14,0:17:15.04:229,15,0	0/1:48,0:43:34:34,0,954	1/1:6,17:21:15.05:352,15,0	0/1:24,0:21:19.71:20,0,383
chr10	102323289	.	C	CTCTA	2314.33	PASS	AB=1.000;AC=15;AF=0.300;AN=50;BaseQRankSum=5.071;DP=604;FS=1.161;HRun=0;HaplotypeScore=118.6888;InbreedingCoeff=0.6624;MQ=49.93;MQ0=22;MQRankSum=0.573;QD=11.93;ReadPosRankSum=-0.971;VQSLOD=2.8498;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:28:48.30:0,48,695	0/0:11,0:11:12.02:0,12,144	./.	./.	0/0:24,0:24:56.93:0,57,676	1/1:6,12:17:21.07:496,21,0	./.	0/1:43,0:40:9.09:9,0,55	0/0:19,0:19:33.03:0,33,444	0/0:35,0:36:69.19:0,69,949	0/0:24,0:24:51.01:0,51,701	0/0:21,0:21:45.13:0,45,647	0/0:34,0:34:78.11:0,78,1026	0/0:14,0:14:30.02:0,30,414	0/0:23,0:23:27.10:0,27,571	0/0:28,0:28:60.14:0,60,821	0/0:27,0:27:18.47:0,18,415	1/1:5,9:14:14.52:353,15,0	1/1:17,0:11:15.01:244,15,0	0/1:35,0:35:21.83:680,0,22	1/1:15,0:15:4.11:365,4,0	0/0:17,0:17:36:0,36,507	0/0:27,0:25:21.06:0,21,308	0/0:15,0:14:15.04:0,15,199	0/0:18,0:18:33.08:0,33,469	1/1:25,0:20:17.91:142,18,0	0/1:12,0:11:34.89:133,0,35	1/1:13,0:12:8.96:69,9,0
chr10	102323326	.	T	TCTAC	3146.08	PASS	AB=1.000;AC=14;AF=0.259;AN=54;BaseQRankSum=-2.045;DP=608;FS=0.973;HRun=0;HaplotypeScore=120.2037;InbreedingCoeff=0.6999;MQ=50.04;MQ0=14;MQRankSum=-2.248;QD=18.73;ReadPosRankSum=-1.120;VQSLOD=2.8036;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:34.64:0,35,737	0/0:6,0:6:9:0,9,100	1/1:18,0:1:2.22:7,2,0	0/0:13,0:2:3:0,3,27	0/0:28,0:28:57.06:0,57,744	0/1:19,0:18:52.86:296,0,53	0/0:7,0:3:3:0,3,25	1/1:34,0:28:43.28:383,43,0	0/0:21,0:21:33:0,33,447	0/0:40,0:40:99:0,102,1265	0/0:27,0:26:59.97:0,60,781	0/0:25,0:25:63.08:0,63,807	0/0:40,0:40:95.99:0,96,1166	0/0:15,0:15:30.08:0,30,458	0/0:21,0:21:45.02:0,45,621	0/0:42,0:42:99:0,108,1213	0/0:24,0:24:23.81:0,24,484	0/1:16,0:15:23.91:224,0,24	1/1:11,1:11:20.98:254,21,0	1/1:25,15:39:38.24:1258,38,0	1/1:9,7:14:32.95:609,33,0	0/0:17,0:16:33.09:0,33,509	0/0:23,0:22:35.99:0,36,447	0/0:14,0:12:17.87:0,18,178	0/0:19,0:19:33.07:0,33,524	0/0:24,0:20:41.80:0,42,308	1/1:9,2:10:20.81:294,21,0	./.
chr10	102323357	.	C	CTCTA	9212.62	PASS	AB=0.745;AC=41;AF=0.759;AN=54;BaseQRankSum=0.522;DP=634;FS=1.035;HRun=0;HaplotypeScore=150.7442;InbreedingCoeff=0.7391;MQ=48.09;MQ0=24;MQRankSum=-6.807;QD=19.60;ReadPosRankSum=-3.409;VQSLOD=4.0072;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,10:33:99:377,0,414	0/0:4,0:4:9.02:0,9,119	./.	0/0:18,0:2:2.99:0,3,23	0/0:32,0:32:63.20:0,63,962	1/1:17,0:19:15.05:254,15,0	1/1:9,0:6:6:69,6,0	1/1:29,0:25:8.98:101,9,0	1/1:11,0:20:18.06:313,18,0	1/1:22,23:45:28.28:1591,28,0	1/1:15,11:24:27.09:639,27,0	0/0:16,0:16:30.10:0,30,467	0/0:35,0:35:48.16:0,48,748	1/1:20,0:21:15.05:260,15,0	1/1:17,0:22:15.05:261,15,0	0/0:37,0:37:87.28:0,87,1336	1/1:19,0:19:5.81:104,6,0	1/1:12,0:11:8.99:101,9,0	1/1:11,5:10:21.07:480,21,0	1/1:19,14:31:30.10:709,30,0	1/1:7,11:16:30.10:709,30,0	1/1:9,0:12:6.02:104,6,0	1/1:19,2:35:33.11:563,33,0	1/1:12,0:13:10.92:148,11,0	1/1:19,0:29:36.12:595,36,0	1/1:10,21:28:57.20:1297,57,0	1/1:6,0:13:24.08:395,24,0	1/1:1,4:4:6.02:142,6,0
chr10	102324364	.	AACAC	A	1258.72	PASS	AB=0.900;AC=20;AF=0.385;AN=52;BaseQRankSum=3.579;DP=466;FS=1.599;HRun=0;HaplotypeScore=71.8468;InbreedingCoeff=0.6708;MQ=69.55;MQ0=12;MQRankSum=1.333;QD=8.56;ReadPosRankSum=2.892;VQSLOD=1.8760;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:29:6.02:0,6,105	0/0:5,0:7:14.52:0,15,178	./.	./.	0/0:16,0:15:15.03:0,15,259	0/1:13,0:12:15.03:67,0,15	1/1:10,2:12:3.01:47,3,0	0/0:20,0:18:8.99:0,9,101	1/1:6,6:13:13.90:173,14,0	0/0:16,0:15:9.03:0,9,144	0/0:12,0:13:14.57:0,15,174	0/0:14,0:14:11.92:0,12,159	0/0:9,0:9:9.03:0,9,165	0/1:9,1:12:8.85:62,0,9	1/1:8,7:16:14.95:209,15,0	0/0:18,0:18:21.07:0,21,369	1/1:11,8:19:15.14:275,15,0	1/1:6,0:11:3:28,3,0	0/0:16,0:16:15.99:0,16,247	0/0:10,0:10:12.03:0,12,172	0/0:26,0:24:38.46:0,38,584	1/1:10,2:14:11.63:118,12,0	1/1:8,5:13:9.03:140,9,0	1/1:10,4:14:9.03:140,9,0	1/1:6,4:10:12.04:186,12,0	0/0:21,0:20:30.09:0,30,514	0/0:20,0:22:38.56:0,39,497	0/0:10,0:10:3.47:0,3,28
chr10	102324799	.	ATG	A	2772.74	PASS	AB=0.869;AC=33;AF=0.635;AN=52;BaseQRankSum=6.529;DP=736;FS=4.722;HRun=0;HaplotypeScore=118.3001;InbreedingCoeff=0.3176;MQ=67.37;MQ0=10;MQRankSum=-1.220;QD=5.89;ReadPosRankSum=-0.626;VQSLOD=3.0918;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,3:49:16.52:0,17,733	0/0:10,0:10:26.92:0,27,357	./.	0/0:36,0:23:2.79:0,3,19	0/1:17,1:19:33.07:33,0,243	1/1:10,3:16:19.44:184,19,0	1/1:12,9:23:26.64:271,27,0	0/0:28,0:41:15.60:0,16,103	1/1:10,12:23:26.70:261,27,0	0/0:29,0:28:24.53:0,25,443	0/1:13,2:15:36.66:37,0,326	0/1:21,0:21:11.35:11,0,263	0/1:25,2:27:21.99:22,0,493	1/1:9,10:19:27.07:300,27,0	1/1:14,15:29:17.88:181,18,0	0/1:27,1:30:56.91:57,0,540	0/1:15,18:33:12.29:301,0,12	0/0:18,0:19:23.96:0,24,453	0/1:13,0:18:11.08:20,0,11	1/1:13,0:30:2.84:14,3,0	./.	1/1:9,11:22:20.79:212,21,0	1/1:7,8:15:2.04:121,2,0	1/1:8,17:25:32.92:348,33,0	1/1:19,17:36:35.71:356,36,0	1/1:14,0:32:20.71:111,21,0	1/1:4,0:17:3.35:68,3,0	1/1:9,0:18:10.08:45,10,0
chr10	102325396	.	ACTCT	A	3020.59	PASS	AB=0.688;AC=37;AF=0.685;AN=54;BaseQRankSum=6.817;DP=364;FS=2.509;HRun=0;HaplotypeScore=71.6963;InbreedingCoeff=0.6582;MQ=63.96;MQ0=6;MQRankSum=-2.808;QD=11.62;ReadPosRankSum=3.287;VQSLOD=2.7923;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,2:15:7.58:364,8,0	0/0:6,0:7:14.77:0,15,253	./.	0/0:16,0:10:3.01:0,3,39	0/0:14,0:14:18.53:0,19,385	1/1:7,15:22:10.01:412,10,0	1/1:0,2:2:3.01:48,3,0	1/1:22,0:28:6.30:82,6,0	1/1:4,8:11:20.96:304,21,0	0/0:17,0:17:33.11:0,33,724	0/0:11,0:11:24.07:0,24,478	0/0:9,0:9:15.05:0,15,359	0/0:13,0:13:36.11:0,36,725	1/1:3,6:9:18.06:288,18,0	0/1:6,5:11:9.79:132,0,10	0/0:6,0:6:12.04:0,12,257	1/1:11,15:26:0.61:313,1,0	1/1:4,10:15:12.03:172,12,0	1/1:9,0:8:8.90:95,9,0	1/1:3,0:18:9.01:85,9,0	1/1:18,0:18:6.28:55,6,0	1/1:0,3:3:9.03:144,9,0	1/1:2,5:7:6.02:96,6,0	1/1:4,5:9:9.03:144,9,0	1/1:5,2:7:3.01:48,3,0	1/1:2,0:13:15.27:235,15,0	1/1:5,0:16:18.01:163,18,0	1/1:8,0:16:3:28,3,0
chr10	102327224	.	AAC	A	1143.82	PASS	AB=0.894;AC=23;AF=0.442;AN=52;BaseQRankSum=0.231;DP=510;FS=7.769;HRun=0;HaplotypeScore=81.2546;InbreedingCoeff=0.4218;MQ=68.82;MQ0=20;MQRankSum=1.130;QD=4.56;ReadPosRankSum=2.789;VQSLOD=1.4999;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:41.84:0,42,357	0/0:6,0:6:3.43:0,3,101	./.	./.	0/1:21,6:26:52.10:52,0,209	0/1:14,0:15:23.77:133,0,24	1/1:9,4:12:15.03:155,15,0	0/0:20,0:19:17.64:0,18,111	1/1:8,1:9:5.85:47,6,0	0/1:12,1:13:14.88:15,0,145	0/0:19,0:20:6.89:0,7,192	0/0:8,0:8:8.70:0,9,100	0/1:8,3:11:26.59:27,0,35	1/1:8,9:17:9.02:98,9,0	1/1:13,5:16:3.01:33,3,0	0/1:18,0:17:19.38:19,0,174	1/1:15,10:26:22.44:214,22,0	0/0:18,0:18:26.48:0,26,186	0/0:16,0:15:11.68:0,12,77	0/0:20,0:20:8.93:0,9,80	0/0:16,0:15:14.60:0,15,105	1/1:10,4:14:3.01:33,3,0	1/1:10,13:23:14.74:151,15,0	1/1:19,6:23:4.92:102,5,0	1/1:19,1:19:26.97:247,27,0	0/0:17,0:16:24.37:0,24,209	0/0:10,0:15:8.75:0,9,56	0/0:8,0:12:5.96:0,6,45
chr10	102327738	.	T	TCA	684.82	PASS	AB=1.000;AC=24;AF=0.444;AN=54;BaseQRankSum=9.335;DP=400;FS=33.158;HRun=0;HaplotypeScore=89.9802;InbreedingCoeff=0.3527;MQ=43.93;MQ0=22;MQRankSum=0.319;QD=2.94;ReadPosRankSum=0.155;VQSLOD=0.2806;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:14:2.32:7,2,0	0/0:6,0:5:8.20:0,8,71	0/0:19,0:8:20.76:0,21,162	0/0:10,0:5:11.91:0,12,89	0/0:19,0:18:40.99:0,41,320	0/1:25,0:23:15.31:22,0,15	0/1:11,0:11:16.69:46,0,17	0/0:20,0:18:28.48:0,28,299	1/1:14,0:13:11.96:104,12,0	0/0:13,0:13:38.87:0,39,398	0/0:10,0:10:0.74:0,1,132	0/0:20,0:20:44.55:0,45,413	0/0:12,0:12:30.01:0,30,301	1/1:14,0:14:1.47:16,1,0	0/1:19,0:18:5.51:27,0,6	0/0:11,0:11:23.94:0,24,193	1/1:18,0:17:10.50:113,11,0	0/1:7,0:7:16.56:17,0,50	0/0:13,0:13:11.11:0,11,182	1/1:9,0:9:4.30:16,4,0	0/0:12,0:11:0:0,0,0	1/1:14,0:14:8.74:74,9,0	1/1:17,0:16:11.87:115,12,0	1/1:7,9:16:3.01:42,3,0	1/1:14,0:12:6.46:89,6,0	0/1:22,0:18:68.72:113,0,69	0/1:14,0:14:58.22:58,0,85	./.
chr10	102327740	.	T	TCACACACA	2392.36	PASS	AB=0.950;AC=26;AF=0.481;AN=54;BaseQRankSum=9.091;DP=404;FS=3.679;HRun=0;HaplotypeScore=115.9270;InbreedingCoeff=0.4163;MQ=44.40;MQ0=22;MQRankSum=-0.468;QD=9.61;ReadPosRankSum=-0.358;VQSLOD=1.8885;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:13:2.99:0,3,24	0/0:6,0:5:8.89:0,9,128	0/0:19,0:8:21.07:0,21,502	0/0:12,0:7:15.02:0,15,246	0/0:20,0:19:44.81:0,45,1055	1/1:24,0:22:2.71:39,3,0	1/1:12,0:12:6.65:107,7,0	0/1:19,0:17:81.74:82,0,175	1/1:14,0:13:7.84:198,8,0	0/0:14,0:14:14.24:0,14,734	0/0:11,0:11:18.53:0,19,430	0/0:19,0:19:24.90:0,25,1002	0/0:12,0:12:6.28:0,6,578	1/1:14,0:14:2.84:77,3,0	1/1:19,0:18:11.50:101,12,0	0/0:13,0:13:23.78:0,24,547	1/1:18,0:17:21.95:269,22,0	0/1:4,0:7:16.44:99,0,16	0/1:13,0:13:52.68:53,0,211	0/0:4,4:10:0:0,0,0	0/1:13,0:12:0:0,0,0	1/1:15,0:14:9.37:152,9,0	1/1:17,0:16:12.29:227,12,0	1/1:14,0:14:5.23:50,5,0	1/1:14,0:12:18.88:247,19,0	0/1:23,0:19:36.51:534,0,37	0/1:13,0:13:51.60:338,0,52	./.
chr10	102327742	.	T	TCACACACA	4531.25	PASS	AC=32;AF=0.593;AN=54;BaseQRankSum=7.225;DP=445;FS=0.708;HRun=0;HaplotypeScore=132.7942;InbreedingCoeff=0.7849;MQ=43.34;MQ0=19;MQRankSum=-3.087;QD=15.90;ReadPosRankSum=-0.386;VQSLOD=4.0616;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:19:0:0,0,0	0/0:6,0:5:2.93:0,3,75	0/0:19,0:8:21.06:0,21,442	0/0:12,0:7:12.81:0,13,267	0/0:20,0:20:45.14:0,45,1029	1/1:11,13:25:8.73:99,9,0	1/1:13,0:13:11.78:135,12,0	1/1:29,0:19:6.02:179,6,0	1/1:16,0:15:11.43:359,11,0	0/0:14,0:14:27.08:0,27,632	0/0:11,0:11:21:0,21,404	0/0:20,0:20:34.36:0,34,806	0/0:12,0:12:24.08:0,24,583	1/1:16,0:16:6.02:115,6,0	1/1:19,0:19:5.75:67,6,0	0/0:12,0:12:21.05:0,21,476	1/1:20,0:19:18.64:436,19,0	1/1:13,0:13:18.06:491,18,0	1/1:15,0:15:12.04:301,12,0	0/0:9,0:9:0:0,0,0	1/1:16,0:14:3.81:26,4,0	1/1:15,0:14:10.72:288,11,0	1/1:16,0:15:12.51:388,13,0	1/1:18,0:18:4.80:54,5,0	1/1:12,0:11:12.04:371,12,0	1/1:25,0:21:35.97:718,36,0	1/1:15,0:15:21.07:506,21,0	./.
chr10	102327762	.	A	ACACA	2737.46	PASS	AC=36;AF=0.667;AN=54;BaseQRankSum=9.624;DP=498;FS=2.314;HRun=0;HaplotypeScore=134.5214;InbreedingCoeff=0.7566;MQ=58.11;MQ0=10;MQRankSum=-5.172;QD=8.10;ReadPosRankSum=-2.064;VQSLOD=2.1144;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:20:2.90:16,3,0	0/0:3,0:3:3.01:0,3,40	0/0:29,0:17:19.74:0,20,227	0/0:25,0:19:12.80:0,13,169	0/0:20,0:20:45.14:0,45,635	1/1:30,0:30:7.20:57,7,0	1/1:14,0:14:20.02:187,20,0	1/1:33,0:23:18.06:295,18,0	1/1:14,0:13:11.93:181,12,0	0/0:15,0:15:27.07:0,27,403	0/0:15,0:15:17.93:0,18,214	0/0:20,0:20:30.99:0,31,462	0/0:11,0:11:24.08:0,24,376	1/1:18,0:18:2.99:38,3,0	1/1:6,9:16:4.56:39,5,0	0/0:15,0:15:20.72:0,21,283	1/1:23,0:23:23.69:270,24,0	1/1:12,0:12:3.01:60,3,0	1/1:19,0:19:26.98:358,27,0	1/1:13,0:13:3.59:10,4,0	1/1:15,0:13:2.74:24,3,0	1/1:21,0:21:10.23:154,10,0	1/1:14,0:14:12.01:198,12,0	1/1:20,0:20:3.67:44,4,0	1/1:13,0:12:11.83:186,12,0	1/1:23,0:21:47.31:574,47,0	1/1:16,0:16:18.06:240,18,0	./.
chr10	102329161	.	A	AT	760.64	PASS	AB=0.960;AC=16;AF=0.286;AN=56;BaseQRankSum=2.716;DP=318;FS=5.187;HRun=3;HaplotypeScore=56.2222;InbreedingCoeff=0.2383;MQ=68.47;MQ0=0;MQRankSum=-1.799;QD=4.00;ReadPosRankSum=-2.004;VQSLOD=-0.5063;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:6.37:0,6,47	0/0:6,0:6:18.06:0,18,222	0/0:9,0:6:9.39:0,9,92	0/1:11,0:7:2.07:2,0,91	0/0:9,0:9:27.08:0,27,334	0/1:18,0:18:19:54,0,19	0/0:4,0:4:2.71:0,3,6	0/1:32,5:37:11.80:137,0,12	0/0:9,0:9:15.26:0,15,68	0/0:5,0:5:15.04:0,15,175	0/0:9,0:9:21.06:0,21,253	0/0:6,0:6:18.05:0,18,213	0/0:3,0:3:9.03:0,9,111	1/1:6,0:6:4.87:67,5,0	0/0:7,0:7:4.38:0,4,10	0/0:8,0:8:24.08:0,24,297	0/1:33,0:33:10.88:11,0,47	0/1:22,0:22:14.36:88,0,14	1/1:8,8:16:28.90:271,29,0	0/1:6,2:8:0.89:89,0,1	1/1:2,0:2:1.98:23,2,0	0/0:5,0:5:6.82:0,7,22	0/1:10,0:10:11.58:12,0,17	0/0:5,0:5:4.88:0,5,12	0/1:12,0:12:11.77:12,0,14	0/0:9,0:9:6.38:0,6,20	1/1:12,3:15:13.26:156,13,0	0/0:10,0:10:10.73:0,11,25
chr10	102329400	.	C	CAT	233.54	PASS	AB=0.879;AC=4;AF=0.071;AN=56;BaseQRankSum=6.101;DP=1019;FS=34.536;HRun=0;HaplotypeScore=254.5465;InbreedingCoeff=0.3568;MQ=50.66;MQ0=9;MQRankSum=-4.040;QD=2.96;ReadPosRankSum=-1.258;VQSLOD=1.1299;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,131,1881	0/0:10,1:11:20.86:0,21,261	0/0:56,0:32:64.93:0,65,1058	0/0:45,0:28:68.69:0,69,838	0/0:18,1:19:12.04:0,12,177	0/0:25,0:25:45.13:0,45,640	0/0:37,1:39:34.60:0,35,1141	0/0:48,0:47:99:0,135,1892	0/0:43,0:43:81.27:0,81,1188	0/1:43,2:45:18.51:19,0,1486	1/1:12,2:14:6.01:99,6,0	0/0:35,0:35:83.62:0,84,1215	0/0:32,0:32:77.85:0,78,1098	0/0:42,0:42:87.28:0,87,1259	0/0:53,0:53:99:0,120,1685	0/0:52,0:52:99:0,135,1964	0/0:27,0:26:69.21:0,69,992	0/0:35,0:35:97.97:0,98,1312	0/0:30,0:28:75.25:0,75,1086	0/0:23,0:23:34.93:0,35,481	0/0:87,0:86:99:0,217,3170	0/0:22,0:22:11.95:0,12,175	0/0:18,0:17:11.94:0,12,156	0/0:41,0:39:80.80:0,81,1187	0/1:15,5:20:99:221,0,270	0/0:35,0:35:93.26:0,93,1326	0/0:34,0:34:69.20:0,69,987	0/0:27,0:27:78.16:0,78,1060
chr10	102329445	.	CAT	C	20191.72	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=7.973;DP=1173;FS=19.036;HRun=0;HaplotypeScore=299.8152;InbreedingCoeff=0.9667;MQ=49.11;MQ0=12;MQRankSum=4.207;QD=26.60;ReadPosRankSum=4.045;VQSLOD=4.2496;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,59:60:99:1703,114,0	0/0:13,0:13:13.11:0,13,346	0/0:62,1:42:49.88:0,50,1526	0/0:60,0:39:59.39:0,59,1376	0/0:33,0:33:33.33:0,33,509	1/1:0,36:36:71.92:1097,72,0	1/1:2,45:47:77.57:1164,78,0	1/1:2,41:43:99:1593,123,0	1/1:1,50:50:69.02:1039,69,0	0/0:56,0:56:99:0,135,2425	0/0:18,0:18:15.43:0,15,274	0/0:43,0:43:93.25:0,93,1759	0/0:31,0:31:81.05:0,81,1452	1/1:2,41:43:74.48:1141,74,0	1/1:2,50:52:20.17:1084,20,0	0/0:55,0:55:99:0,120,2196	1/1:0,24:24:63.21:961,63,0	0/0:41,0:41:99:0,113,1861	1/1:1,22:22:66.09:884,66,0	1/1:9,19:28:49.95:819,50,0	1/1:2,105:105:99:3298,216,0	1/1:7,21:28:2.99:257,3,0	1/1:4,18:21:24.02:364,24,0	1/1:2,56:55:92.88:1418,93,0	1/1:19,10:29:21.81:312,22,0	1/1:8,41:49:88.43:1234,88,0	1/1:2,34:36:68.73:1022,69,0	1/1:4,19:23:29.63:803,30,0
chr10	102329572	.	TAC	T	689.66	PASS	AB=0.819;AC=12;AF=0.214;AN=56;BaseQRankSum=6.964;DP=769;FS=29.109;HRun=0;HaplotypeScore=264.4195;InbreedingCoeff=-0.2912;MQ=35.66;MQ0=9;MQRankSum=-7.017;QD=2.08;ReadPosRankSum=2.988;VQSLOD=1.3451;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:15.05:0,15,232	0/1:10,6:16:19.55:20,0,124	0/0:14,0:8:17.99:0,18,232	0/0:12,0:7:18.06:0,18,290	0/0:26,4:30:17.63:0,18,213	0/1:20,8:28:3.30:3,0,154	0/0:25,3:28:12.83:0,13,128	0/0:38,3:40:89.95:0,90,1315	0/0:39,8:47:16.90:0,17,290	0/1:59,11:70:99:318,0,1490	0/0:15,8:23:3.95:0,4,53	0/0:28,3:30:10.71:0,11,136	0/1:22,5:27:37.31:37,0,156	0/0:33,3:36:6.48:0,6,74	0/0:47,8:54:24.69:0,25,472	0/1:35,9:44:8.68:9,0,278	0/0:5,1:6:3.01:0,3,40	0/1:15,2:17:33.22:33,0,494	0/1:19,1:18:26.39:26,0,541	0/1:14,6:20:13.54:14,0,70	0/0:23,0:22:24:0,24,331	0/0:18,10:27:4.27:0,4,53	0/1:16,6:20:0.30:0,0,54	0/0:19,4:23:12.02:0,12,178	0/0:16,1:17:4.98:0,5,73	0/1:27,9:36:99:256,0,916	0/1:19,6:25:86.36:86,0,131	0/1:5,2:7:25.70:26,0,127
chr10	102330869	.	A	AG	7880.04	PASS	AB=1.000;AC=49;AF=0.980;AN=50;BaseQRankSum=-0.448;DP=209;FS=0.000;HRun=0;HaplotypeScore=158.7769;InbreedingCoeff=0.0305;MQ=41.89;MQ0=0;MQRankSum=-1.732;QD=37.88;ReadPosRankSum=1.712;VQSLOD=4.2051;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:17:39.13:594,39,0	1/1:1,2:3:6.02:96,6,0	0/1:3,0:3:0.75:9,0,1	./.	1/1:2,4:6:9.03:143,9,0	1/1:1,7:8:21.07:322,21,0	1/1:1,10:11:27.09:418,27,0	1/1:1,14:15:45.15:717,45,0	1/1:0,12:12:36.12:573,36,0	1/1:0,3:3:9.03:140,9,0	1/1:2,1:3:3.01:48,3,0	1/1:1,7:8:18.06:287,18,0	1/1:0,4:4:9.03:143,9,0	1/1:0,9:9:27.09:430,27,0	1/1:0,10:10:30.10:477,30,0	1/1:0,6:6:15.05:239,15,0	1/1:1,7:8:12.04:191,12,0	1/1:0,3:3:9.03:143,9,0	1/1:3,13:16:42.12:633,42,0	1/1:1,4:5:6.02:95,6,0	1/1:0,10:10:21.07:306,21,0	./.	1/1:0,5:5:12.04:181,12,0	1/1:2,7:9:18.06:272,18,0	1/1:2,14:16:36.12:563,36,0	1/1:0,9:8:27.09:430,27,0	1/1:0,9:9:27.09:430,27,0	./.
chr10	102330880	.	TG	T	7610.44	PASS	AC=48;AF=0.960;AN=50;BaseQRankSum=-0.056;DP=199;FS=0.000;HRun=1;HaplotypeScore=169.8739;InbreedingCoeff=0.4581;MQ=33.83;MQ0=0;MQRankSum=-1.732;QD=38.44;ReadPosRankSum=0.801;VQSLOD=4.3401;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:42.10:556,42,0	1/1:0,3:3:9.03:126,9,0	0/0:1,0:1:1.82:0,2,5	./.	1/1:0,6:6:12.04:167,12,0	1/1:0,8:8:24.08:335,24,0	1/1:0,11:11:33.11:460,33,0	1/1:0,16:16:48.16:667,48,0	1/1:0,11:11:33.11:456,33,0	1/1:0,4:4:12.04:167,12,0	1/1:0,4:4:9.03:120,9,0	1/1:0,7:7:21.07:289,21,0	1/1:0,3:3:9.03:125,9,0	1/1:0,9:9:27.09:377,27,0	1/1:0,10:10:30.10:419,30,0	1/1:0,7:7:21.07:293,21,0	1/1:0,9:9:24.04:313,24,0	1/1:0,3:3:9.03:126,9,0	1/1:0,12:12:30.10:419,30,0	1/1:0,4:4:12:145,12,0	1/1:0,9:9:14.76:183,15,0	./.	1/1:1,4:5:12.04:162,12,0	1/1:0,7:7:18.05:250,18,0	1/1:0,16:16:48.16:661,48,0	1/1:0,9:9:27.09:377,27,0	1/1:0,10:10:30.10:419,30,0	./.
chr10	102330889	.	CT	C	7290.55	PASS	AC=50;AF=1.000;AN=50;DP=213;FS=0.000;HRun=2;HaplotypeScore=195.7861;InbreedingCoeff=-0.0127;MQ=33.57;MQ0=0;QD=34.23;VQSLOD=3.9801;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,12:13:33.11:425,33,0	1/1:0,3:3:9.03:112,9,0	1/1:1,0:1:2.98:21,3,0	./.	1/1:0,8:8:24.08:310,24,0	1/1:0,10:10:27.09:350,27,0	1/1:0,12:12:33.11:427,33,0	1/1:3,13:16:39.13:506,39,0	1/1:1,10:11:30.10:388,30,0	1/1:0,4:4:12.04:155,12,0	1/1:0,4:4:9.03:116,9,0	1/1:0,7:7:21.07:270,21,0	1/1:0,4:4:12.04:153,12,0	1/1:0,11:11:33.11:424,33,0	1/1:0,11:11:30.10:389,30,0	1/1:0,7:7:21.07:272,21,0	1/1:0,9:9:27.09:348,27,0	1/1:0,3:3:9.03:117,9,0	1/1:5,8:13:24.08:311,24,0	1/1:0,4:4:9.03:116,9,0	1/1:0,7:7:9.03:117,9,0	./.	1/1:0,6:6:15.05:194,15,0	1/1:0,7:7:18.05:227,18,0	1/1:0,18:18:48.15:617,48,0	1/1:0,10:10:30.10:386,30,0	1/1:1,13:14:42.14:539,42,0	./.
chr10	102330905	.	GA	G	7183.83	PASS	AC=50;AF=0.962;AN=52;BaseQRankSum=0.559;DP=212;FS=0.000;HRun=2;HaplotypeScore=203.5380;InbreedingCoeff=0.4400;MQ=33.53;MQ0=0;MQRankSum=-1.732;QD=34.21;ReadPosRankSum=0.372;VQSLOD=4.1071;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:11:21.07:272,21,0	1/1:1,1:2:3.01:39,3,0	0/0:1,0:1:3.01:0,3,45	./.	1/1:1,8:9:21.07:272,21,0	1/1:0,12:12:36.12:463,36,0	1/1:1,10:11:30.10:388,30,0	1/1:0,14:14:42.14:545,42,0	1/1:2,8:10:24.08:311,24,0	1/1:0,5:5:15.05:195,15,0	1/1:0,5:5:12.04:155,12,0	1/1:0,8:8:24.08:311,24,0	1/1:0,5:5:15.05:194,15,0	1/1:1,9:10:24.08:308,24,0	1/1:1,10:11:27.09:350,27,0	1/1:0,7:7:21.07:272,21,0	1/1:0,7:7:21.07:272,21,0	1/1:0,2:2:3.01:39,3,0	1/1:0,10:10:27.09:350,27,0	1/1:0,7:7:21.07:272,21,0	1/1:0,6:6:12.04:156,12,0	1/1:0,2:2:6.02:78,6,0	1/1:1,6:7:15.05:193,15,0	1/1:1,6:7:14.72:194,15,0	1/1:0,17:17:51.17:661,51,0	1/1:1,8:9:24.08:311,24,0	1/1:1,15:16:45.15:582,45,0	./.
chr10	102330916	.	TG	T	5469.85	PASS	AC=50;AF=1.000;AN=50;DP=203;FS=0.000;HRun=5;HaplotypeScore=219.5771;InbreedingCoeff=-0.0239;MQ=33.72;MQ0=0;QD=27.21;VQSLOD=2.0632;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,7:9:18.05:203,18,0	1/1:0,1:1:3.01:34,3,0	./.	./.	1/1:1,8:9:21.01:222,21,0	1/1:2,11:13:33.03:356,33,0	1/1:2,7:9:18.05:203,18,0	1/1:2,9:11:27.08:306,27,0	1/1:0,7:7:18.05:203,18,0	1/1:0,7:7:21.06:236,21,0	1/1:0,6:6:15.04:169,15,0	1/1:1,5:6:18.05:201,18,0	1/1:0,6:6:18.05:201,18,0	1/1:1,6:7:18.05:203,18,0	1/1:1,12:13:29.62:283,30,0	1/1:0,9:9:21.01:221,21,0	1/1:1,6:7:18.05:203,18,0	1/1:0,1:1:3.01:34,3,0	1/1:4,6:10:15.04:168,15,0	1/1:0,9:9:26.99:277,27,0	1/1:0,4:4:9.03:102,9,0	1/1:1,3:4:11.95:107,12,0	1/1:2,3:5:9.02:98,9,0	1/1:2,5:7:11.97:119,12,0	1/1:1,16:17:48.14:543,48,0	1/1:1,8:9:24.07:271,24,0	1/1:0,15:15:45.13:506,45,0	./.
chr10	102330963	.	CG	C	6973.49	PASS	AC=48;AF=1.000;AN=48;BaseQRankSum=0.168;DP=188;FS=0.000;HRun=2;HaplotypeScore=293.6600;InbreedingCoeff=-0.0257;MQ=28.69;MQ0=0;MQRankSum=0.624;QD=37.09;ReadPosRankSum=1.712;VQSLOD=3.6769;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:12.01:167,12,0	1/1:0,5:5:15.05:209,15,0	./.	./.	1/1:1,15:16:35.31:468,35,0	1/1:0,10:10:30.10:389,30,0	1/1:0,3:3:9.03:117,9,0	1/1:0,8:8:24.08:334,24,0	1/1:0,1:1:3.01:39,3,0	1/1:0,14:14:39.09:538,39,0	1/1:1,11:12:30.10:417,30,0	1/1:0,6:6:18.06:250,18,0	1/1:0,9:9:27.09:375,27,0	1/1:0,3:3:9.03:116,9,0	1/1:0,8:8:21.07:272,21,0	1/1:0,8:8:24.08:318,24,0	1/1:0,8:8:21.07:267,21,0	./.	1/1:0,2:2:6.02:80,6,0	1/1:0,14:14:42.10:562,42,0	./.	1/1:0,11:11:30.10:387,30,0	1/1:0,6:6:15.05:189,15,0	1/1:0,2:2:6.02:78,6,0	1/1:0,10:10:30.03:358,30,0	1/1:0,6:6:15.05:209,15,0	1/1:0,17:17:48.16:667,48,0	1/1:0,4:4:12.04:167,12,0
chr10	102330971	.	TG	T	6567	PASS	AC=50;AF=1.000;AN=50;DP=182;FS=0.000;HRun=1;HaplotypeScore=287.0835;InbreedingCoeff=-0.0347;MQ=28.68;MQ0=0;QD=36.08;VQSLOD=3.6732;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:9.03:125,9,0	1/1:0,5:5:15.05:209,15,0	./.	./.	1/1:0,17:17:47.99:548,48,0	1/1:1,8:9:27:333,27,0	1/1:0,3:3:9.03:125,9,0	1/1:1,7:8:24.05:314,24,0	1/1:0,1:1:3.01:42,3,0	1/1:1,15:16:48.15:630,48,0	1/1:0,14:14:33.10:428,33,0	1/1:1,4:5:15.05:209,15,0	1/1:0,9:9:27.05:354,27,0	1/1:0,4:4:11.95:113,12,0	1/1:0,8:8:21.07:293,21,0	1/1:0,6:6:17.98:208,18,0	1/1:0,8:8:18.02:227,18,0	1/1:0,1:1:3.01:42,3,0	1/1:0,1:1:3.01:41,3,0	1/1:0,12:12:36.07:463,36,0	./.	1/1:1,10:11:29.89:358,30,0	1/1:0,6:6:18.06:240,18,0	1/1:0,2:2:6.02:84,6,0	1/1:1,7:8:24.03:310,24,0	1/1:0,7:7:18.06:246,18,0	1/1:0,14:14:38.99:459,39,0	1/1:0,4:4:12.04:167,12,0
chr10	102330978	.	GA	G	5489.78	PASS	AC=50;AF=1.000;AN=50;DP=179;FS=0.000;HRun=2;HaplotypeScore=293.4572;InbreedingCoeff=-0.0411;MQ=28.73;MQ0=0;QD=30.67;VQSLOD=3.6497;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:9.03:111,9,0	1/1:1,5:6:15.05:186,15,0	./.	./.	1/1:3,14:17:42.08:478,42,0	1/1:0,8:8:24.08:297,24,0	1/1:0,3:3:9.03:111,9,0	1/1:3,4:7:12.04:149,12,0	1/1:0,1:1:3.01:37,3,0	1/1:1,16:17:48.12:558,48,0	1/1:0,14:14:39.11:460,39,0	1/1:0,5:5:15.05:186,15,0	1/1:1,9:10:27.08:334,27,0	1/1:2,2:4:6.01:64,6,0	1/1:0,8:8:21.07:260,21,0	1/1:1,4:5:12.04:148,12,0	1/1:3,5:8:15.05:184,15,0	1/1:0,1:1:3.01:37,3,0	1/1:0,1:1:3.01:37,3,0	1/1:0,11:11:33.07:392,33,0	./.	1/1:0,10:10:24.07:287,24,0	1/1:0,6:6:18.05:215,18,0	1/1:0,2:2:6.02:74,6,0	1/1:0,7:7:21.07:259,21,0	1/1:2,5:7:12.04:144,12,0	1/1:4,10:14:27.08:334,27,0	1/1:0,4:4:12.04:149,12,0
chr10	102330999	.	TG	T	6575.09	PASS	AC=50;AF=1.000;AN=50;BaseQRankSum=1.367;DP=180;FS=0.000;HRun=3;HaplotypeScore=313.0191;InbreedingCoeff=-0.0391;MQ=28.79;MQ0=0;MQRankSum=0.152;QD=36.53;ReadPosRankSum=1.712;VQSLOD=2.9993;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:9.03:125,9,0	1/1:0,9:9:27.09:356,27,0	./.	./.	1/1:1,18:19:47.34:615,47,0	1/1:0,7:7:21.06:266,21,0	1/1:0,5:5:15.05:201,15,0	1/1:0,3:3:9.03:126,9,0	1/1:0,1:1:3.01:41,3,0	1/1:1,14:15:45.11:561,45,0	1/1:0,15:15:42.12:527,42,0	1/1:0,4:4:12.04:165,12,0	1/1:0,9:9:27.09:359,27,0	1/1:0,1:1:3.01:31,3,0	1/1:0,8:8:24.07:288,24,0	1/1:0,5:5:15.05:197,15,0	1/1:0,4:4:12.04:158,12,0	1/1:0,1:1:3.01:42,3,0	1/1:0,2:2:6.02:81,6,0	1/1:0,13:13:39.11:507,39,0	./.	1/1:3,11:14:33.11:443,33,0	1/1:0,10:10:29.67:357,30,0	1/1:0,2:2:6.02:77,6,0	1/1:0,8:8:24.07:304,24,0	1/1:0,6:6:15.05:203,15,0	1/1:1,10:11:30.04:380,30,0	1/1:0,5:5:12.04:166,12,0
chr10	102331008	.	GGA	G	4268.29	PASS	AC=48;AF=1.000;AN=48;BaseQRankSum=1.668;DP=178;FS=0.000;HRun=0;HaplotypeScore=347.2336;InbreedingCoeff=-0.0083;MQ=28.79;MQ0=0;MQRankSum=-1.265;QD=23.98;ReadPosRankSum=1.711;VQSLOD=3.9709;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:9.02:90,9,0	1/1:0,11:11:32.77:291,33,0	./.	./.	1/1:2,19:21:49.23:445,49,0	1/1:0,7:7:20.66:171,21,0	1/1:0,3:3:9.01:87,9,0	./.	1/1:0,1:1:3:29,3,0	1/1:0,15:15:43.82:386,44,0	1/1:0,17:17:41.38:362,41,0	1/1:0,3:3:9.01:87,9,0	1/1:0,9:9:26.86:235,27,0	1/1:0,1:1:2.74:12,3,0	1/1:0,8:8:23.46:186,23,0	1/1:0,4:4:11.89:102,12,0	1/1:0,2:2:6.01:57,6,0	1/1:0,1:1:3.01:33,3,0	1/1:0,2:2:6.01:62,6,0	1/1:0,12:12:34.56:308,35,0	./.	1/1:2,12:14:30.02:279,30,0	1/1:2,10:12:28.85:255,29,0	1/1:0,1:1:3:28,3,0	1/1:2,7:9:23.73:200,24,0	1/1:1,5:6:14.63:135,15,0	1/1:0,9:9:23.79:221,24,0	1/1:0,7:7:21.04:209,21,0
chr10	102331078	.	CT	C	5371.57	PASS	AC=48;AF=1.000;AN=48;BaseQRankSum=-2.944;DP=246;FS=3.179;HRun=1;HaplotypeScore=465.2548;InbreedingCoeff=-0.0078;MQ=28.87;MQ0=0;MQRankSum=-0.266;QD=21.84;ReadPosRankSum=2.970;VQSLOD=2.0560;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:6:14.96:118,15,0	1/1:0,15:15:44.85:349,45,0	./.	./.	1/1:1,19:20:56.06:464,56,0	1/1:0,13:13:38.89:307,39,0	1/1:0,4:4:11.97:96,12,0	1/1:0,5:5:14.88:105,15,0	1/1:0,4:4:11.96:93,12,0	1/1:1,13:14:26.25:236,26,0	1/1:1,15:16:37.12:317,37,0	1/1:0,7:7:20.95:166,21,0	1/1:1,11:12:32.92:265,33,0	1/1:1,6:7:14.97:121,15,0	1/1:0,7:7:20.94:164,21,0	1/1:0,9:9:26.92:211,27,0	1/1:0,3:3:8.95:66,9,0	1/1:0,1:1:2.99:23,3,0	1/1:0,6:5:14.77:96,15,0	1/1:0,14:14:41.86:326,42,0	./.	1/1:0,26:26:77.82:624,78,0	1/1:0,18:18:53.89:436,54,0	./.	1/1:1,6:7:14.96:119,15,0	1/1:1,13:14:38.64:282,39,0	1/1:0,13:12:35.86:275,36,0	1/1:0,5:5:14.94:114,15,0
chr10	102331096	.	CCG	C	9892.13	PASS	AC=48;AF=1.000;AN=48;DP=263;FS=0.000;HRun=0;HaplotypeScore=475.5305;InbreedingCoeff=-0.0159;MQ=28.88;MQ0=0;QD=37.61;VQSLOD=1.6096;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:15.05:216,15,0	1/1:0,13:13:39.13:557,39,0	./.	./.	1/1:2,18:20:44.80:580,45,0	1/1:1,12:13:38.96:538,39,0	1/1:1,4:5:15.01:185,15,0	1/1:1,7:8:24.04:338,24,0	1/1:1,5:6:18.02:238,18,0	1/1:2,12:14:39.09:547,39,0	1/1:3,13:16:36.12:492,36,0	1/1:0,8:8:24.08:347,24,0	1/1:1,10:11:33.07:456,33,0	1/1:2,7:9:23.99:292,24,0	1/1:0,8:8:24.08:349,24,0	1/1:1,13:14:42.10:582,42,0	1/1:0,4:4:6.02:90,6,0	1/1:1,1:2:3.01:45,3,0	1/1:2,5:6:12.51:167,13,0	1/1:3,13:16:39.13:527,39,0	./.	1/1:2,26:28:78.26:1088,78,0	1/1:0,16:16:48.15:630,48,0	./.	1/1:0,6:6:18.06:248,18,0	1/1:1,12:13:36.12:537,36,0	1/1:1,16:16:47.95:669,48,0	1/1:0,4:4:12.04:172,12,0
chr10	102331113	.	CCCA	C	2896.31	PASS	AB=0.565;AC=44;AF=0.917;AN=48;BaseQRankSum=0.760;DP=284;FS=13.032;HRun=0;HaplotypeScore=528.8277;InbreedingCoeff=-0.1070;MQ=28.78;MQ0=0;MQRankSum=-1.663;QD=10.20;ReadPosRankSum=6.199;VQSLOD=1.3106;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:1,5:6:5.84:37,0,6	1/1:2,9:11:5.68:91,6,0	./.	./.	1/1:2,18:20:39.07:187,39,0	1/1:1,11:12:30.36:137,30,0	1/1:1,3:4:8.52:44,9,0	0/1:5,9:14:54.18:103,0,54	0/1:1,6:7:2.43:51,0,2	0/1:4,13:17:14.02:166,0,14	1/1:1,13:14:33.73:164,34,0	1/1:0,9:9:24.97:114,25,0	1/1:2,9:11:6.82:79,7,0	1/1:0,10:10:24.71:114,25,0	1/1:0,8:8:20.98:93,21,0	1/1:0,18:18:50.31:234,50,0	1/1:0,6:5:11.02:49,11,0	1/1:0,4:3:8.42:40,8,0	1/1:1,7:6:14.63:89,15,0	1/1:1,15:16:25.79:200,26,0	./.	1/1:2,26:28:65.44:325,65,0	1/1:3,13:16:19.61:160,20,0	./.	1/1:2,4:6:3.83:41,4,0	1/1:1,14:15:38.08:222,38,0	1/1:0,19:18:50.16:232,50,0	1/1:3,2:5:5.71:29,6,0
chr10	102331118	.	A	AG	5996.82	PASS	AC=48;AF=1.000;AN=48;BaseQRankSum=1.637;DP=298;FS=0.000;HRun=0;HaplotypeScore=491.3701;InbreedingCoeff=-0.0123;MQ=28.72;MQ0=0;MQRankSum=-1.243;QD=20.26;ReadPosRankSum=1.664;VQSLOD=1.3167;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:11.98:95,12,0	1/1:1,9:10:26.93:216,27,0	./.	./.	1/1:0,18:18:41.81:318,42,0	1/1:3,11:14:32.91:259,33,0	1/1:0,3:3:8.86:62,9,0	1/1:1,9:10:27.02:251,27,0	1/1:1,6:7:20.30:141,20,0	1/1:0,13:13:39.04:366,39,0	1/1:1,13:14:28.32:209,28,0	1/1:4,9:13:37.75:275,38,0	1/1:2,9:11:32.08:218,32,0	1/1:2,10:12:32.49:231,32,0	1/1:5,8:13:34.94:245,35,0	1/1:0,18:18:53.89:429,54,0	1/1:4,6:9:20.94:174,21,0	1/1:0,4:3:9:79,9,0	1/1:2,7:7:20.93:193,21,0	1/1:10,15:25:47.90:384,48,0	./.	1/1:3,26:29:77.07:597,77,0	1/1:1,13:14:32.19:246,32,0	./.	1/1:2,4:6:11.61:85,12,0	1/1:3,14:17:48.46:432,48,0	1/1:0,19:18:53.88:438,54,0	1/1:0,2:2:6:52,6,0
chr10	102331137	.	A	AG	7867.14	PASS	AC=50;AF=1.000;AN=50;DP=326;FS=0.000;HRun=1;HaplotypeScore=498.9001;InbreedingCoeff=-0.0135;MQ=28.75;MQ0=0;QD=24.13;VQSLOD=1.1694;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:21.03:214,21,0	1/1:1,12:13:35.92:319,36,0	./.	./.	1/1:2,17:19:26.57:229,27,0	1/1:1,13:14:38.40:353,38,0	1/1:0,4:4:11.92:103,12,0	1/1:1,15:16:48.14:549,48,0	1/1:0,9:9:27.05:276,27,0	1/1:2,13:15:39.10:424,39,0	1/1:0,10:10:15:133,15,0	1/1:0,14:14:42.07:411,42,0	1/1:1,11:12:33.01:320,33,0	1/1:1,13:14:36.06:362,36,0	1/1:0,17:17:51.08:498,51,0	1/1:1,20:21:59.99:560,60,0	1/1:1,10:10:20.78:201,21,0	1/1:0,5:4:12.03:130,12,0	1/1:3,6:7:17.99:200,18,0	1/1:2,23:25:57.08:538,57,0	./.	1/1:4,25:29:60.05:553,60,0	1/1:3,11:14:11.81:98,12,0	1/1:0,3:3:6:54,6,0	1/1:0,6:6:18.03:172,18,0	1/1:2,16:18:54.15:608,54,0	1/1:0,18:17:50.47:501,50,0	1/1:0,2:2:6.01:62,6,0
chr10	102333322	.	GT	G	4533.65	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=8.526;DP=697;FS=4.487;HRun=10;HaplotypeScore=80.5123;InbreedingCoeff=0.9926;MQ=71.11;MQ0=6;MQRankSum=1.467;QD=19.88;ReadPosRankSum=5.620;VQSLOD=5.4390;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,1:35:73.14:0,73,990	0/0:15,0:15:40.92:0,41,437	0/0:53,0:29:37.46:0,37,395	0/0:48,0:28:10.79:0,11,172	0/0:33,0:33:87.20:0,87,937	1/1:4,13:17:32.97:286,33,0	1/1:4,19:23:53.73:454,54,0	0/0:32,0:32:60.03:0,60,611	1/1:1,15:16:32.73:286,33,0	0/0:20,1:21:28.08:0,28,529	0/0:24,0:24:66.18:0,66,730	0/0:13,0:13:39.07:0,39,407	0/0:20,0:20:45.06:0,45,482	1/1:1,14:15:35.99:312,36,0	1/1:3,15:18:29.99:260,30,0	0/0:20,1:21:37.11:0,37,621	1/1:3,36:39:86.97:755,87,0	0/0:24,0:24:60.12:0,60,643	0/0:19,1:20:19.06:0,19,428	0/0:29,1:30:55.10:0,55,805	0/0:13,0:13:36.98:0,37,399	1/1:0,23:23:62.97:546,63,0	1/1:1,14:15:41.99:364,42,0	1/1:2,33:35:89.96:781,90,0	1/1:4,23:27:29.79:488,30,0	0/0:19,0:19:45.11:0,45,491	0/0:24,1:25:65.96:0,66,688	0/0:21,1:22:40.20:0,40,646
chr10	102333698	.	TTTG	T	333.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.292;DP=646;FS=0.000;HRun=0;HaplotypeScore=89.2680;InbreedingCoeff=0.9927;MQ=65.43;MQ0=0;MQRankSum=0.768;QD=30.27;ReadPosRankSum=0.335;VQSLOD=3.8285;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:63.15:0,63,1221	0/0:17,0:17:45.15:0,45,875	0/0:27,0:25:32.39:0,32,633	0/0:29,0:27:28.04:0,28,510	0/0:26,0:26:60.21:0,60,1192	0/0:18,0:18:45.15:0,45,895	0/0:23,0:23:57.20:0,57,1121	0/0:30,0:30:63.22:0,63,1261	0/0:23,0:23:63.20:0,63,1239	0/0:31,0:31:75.26:0,75,1518	0/0:24,0:24:48.16:0,48,947	0/0:21,0:21:51.12:0,51,905	0/0:29,0:29:69.24:0,69,1352	0/0:13,0:13:30.09:0,30,558	0/0:27,0:27:66.23:0,66,1337	0/0:24,0:24:60.21:0,60,1215	0/0:17,0:17:39.13:0,39,763	1/1:1,10:11:30.10:427,30,0	0/0:18,0:18:36.10:0,36,649	0/0:32,0:32:84.29:0,84,1690	0/0:14,0:14:33.11:0,33,658	0/0:24,0:24:57.20:0,57,1144	0/0:21,0:21:48.16:0,48,963	0/0:25,0:25:54.17:0,54,1051	0/0:26,0:25:20.46:0,20,1120	0/0:20,0:20:51.17:0,51,1021	0/0:29,0:29:69.24:0,69,1378	0/0:14,0:14:36.12:0,36,630
chr10	102334567	.	AG	A	14981.39	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=11.869;DP=643;FS=12.414;HRun=2;HaplotypeScore=68.2248;InbreedingCoeff=0.9969;MQ=80.97;MQ0=0;MQRankSum=-5.213;QD=35.00;ReadPosRankSum=0.689;VQSLOD=4.2463;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:78.25:1013,78,0	0/0:5,0:5:15.05:0,15,224	0/0:21,0:21:57.17:0,57,766	0/0:13,0:13:31.93:0,32,381	0/0:34,0:34:99:0,102,1512	1/1:0,27:27:78.25:1013,78,0	1/1:1,18:19:51.17:662,51,0	1/1:0,31:31:93.29:1193,93,0	1/1:0,19:19:51.17:662,51,0	0/0:36,0:36:99:0,102,1529	0/0:41,0:41:99:0,123,1842	0/0:21,0:21:63.20:0,63,926	0/0:12,0:12:36.12:0,36,538	1/1:1,19:20:54.18:701,54,0	1/1:1,27:28:72.23:935,72,0	0/0:16,0:16:48.16:0,48,707	1/1:0,14:14:36.12:467,36,0	0/0:16,0:16:48.16:0,48,719	1/1:0,23:23:69.21:881,69,0	1/1:0,28:28:78.25:1012,78,0	1/1:0,22:22:63.20:818,63,0	1/1:1,21:22:60.20:779,60,0	1/1:0,31:31:81.08:1040,81,0	1/1:0,10:10:21.07:273,21,0	1/1:0,29:29:81.26:1051,81,0	1/1:0,17:17:51.09:612,51,0	1/1:0,32:32:87.23:1129,87,0	1/1:0,26:26:57.19:740,57,0
chr10	102334786	.	CAGAT	C	7644.64	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=7.811;DP=696;FS=0.353;HRun=0;HaplotypeScore=159.9057;InbreedingCoeff=0.9757;MQ=54.73;MQ0=1;MQRankSum=2.322;QD=30.22;ReadPosRankSum=3.273;VQSLOD=4.8780;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:38:15.58:0,16,111	0/0:9,0:9:21.06:0,21,441	0/0:21,0:12:12.02:0,12,174	0/0:16,0:11:9.03:0,9,168	0/0:25,0:25:57.16:0,57,1293	1/1:8,15:23:45.15:743,45,0	1/1:12,9:21:33.44:505,33,0	0/0:43,0:43:72.23:0,72,1516	1/1:12,17:29:69.02:947,69,0	0/0:37,0:37:84.17:0,84,1958	0/0:35,0:35:84.27:0,84,1864	0/0:21,0:21:48.14:0,48,1056	0/0:14,0:14:27.09:0,27,648	1/1:2,14:16:33.11:532,33,0	1/1:14,25:39:84.11:1244,84,0	0/0:22,0:22:45.15:0,45,1058	1/1:10,10:20:36.08:560,36,0	1/1:10,20:30:29.32:650,29,0	0/0:13,0:13:22.42:0,22,448	0/0:41,0:40:87.07:0,87,1855	0/0:19,0:19:36.12:0,36,805	1/1:5,3:8:15:196,15,0	1/1:7,14:21:45.13:703,45,0	1/1:6,12:18:10.77:490,11,0	1/1:9,19:27:71.22:1075,71,0	0/0:21,0:35:60.86:0,61,1169	0/0:35,0:35:84.20:0,84,1774	0/0:14,0:17:27.18:0,27,326
chr10	102334837	.	GACA	G	1389.21	PASS	AB=0.874;AC=14;AF=0.259;AN=54;BaseQRankSum=6.410;DP=573;FS=4.160;HRun=0;HaplotypeScore=165.0414;InbreedingCoeff=-0.3529;MQ=50.17;MQ0=20;MQRankSum=-4.820;QD=5.45;ReadPosRankSum=-3.398;VQSLOD=2.3219;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,4:22:90.86:121,0,91	0/0:10,0:10:30.10:0,30,701	0/0:13,0:4:9.03:0,9,165	./.	0/0:35,0:33:96.33:0,96,2200	0/1:15,6:21:99:302,0,361	0/1:9,2:9:99:124,0,308	0/1:45,1:26:91.56:92,0,1377	0/1:17,4:21:99:187,0,785	0/0:42,0:40:99:0,114,2543	0/0:41,0:40:99:0,117,2664	0/0:22,0:22:66.22:0,66,1484	0/0:13,0:13:36.12:0,36,825	0/1:10,2:12:55.02:55,0,432	0/0:40,0:40:48.61:0,49,953	0/0:21,0:21:63.19:0,63,1376	0/1:8,1:9:19.58:20,0,240	0/1:18,1:19:16.27:16,0,758	0/0:8,0:6:17.85:0,18,334	0/0:25,2:26:71.94:0,72,1295	0/1:14,0:14:18.76:19,0,412	0/1:7,1:7:99:111,0,177	0/1:12,6:15:99:255,0,391	0/0:15,1:16:18.31:0,18,552	0/1:13,4:17:99:144,0,724	0/1:26,1:23:19.72:20,0,1214	0/0:24,0:24:54.10:0,54,1013	0/1:8,2:10:78.55:79,0,386
chr10	102334882	.	A	AG	385.92	PASS	AB=0.811;AC=4;AF=0.071;AN=56;BaseQRankSum=6.328;DP=644;FS=21.653;HRun=0;HaplotypeScore=189.4752;InbreedingCoeff=-0.1057;MQ=45.28;MQ0=24;MQRankSum=-6.468;QD=4.65;ReadPosRankSum=1.445;VQSLOD=2.0586;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,1:23:99:105,0,397	0/0:9,0:9:27.08:0,27,362	0/0:15,0:1:3.01:0,3,40	0/0:6,0:1:3.01:0,3,35	0/0:35,0:35:99:0,102,1409	0/0:24,0:24:66.21:0,66,905	0/0:17,0:16:40.61:0,41,589	0/0:54,2:36:37.42:0,37,1277	0/0:25,0:25:34.93:0,35,677	0/0:30,0:29:87.29:0,87,1217	0/0:44,0:43:99:0,117,1569	0/0:24,0:24:69.23:0,69,964	0/0:16,0:16:45.15:0,45,629	0/0:16,0:16:38.10:0,38,461	0/0:32,0:31:36.12:0,36,488	0/0:22,0:22:66.22:0,66,923	0/0:14,0:14:21.94:0,22,310	0/0:21,0:20:44.43:0,44,579	0/0:13,0:10:2.79:0,3,332	0/1:15,4:19:99:140,0,493	0/1:7,5:11:19.78:20,0,177	0/0:18,0:17:36.12:0,36,503	0/0:30,0:28:52.14:0,52,733	0/0:13,0:13:16.46:0,16,212	0/0:22,0:21:53.54:0,54,720	0/0:35,2:33:3.19:0,3,1151	0/1:21,6:25:99:229,0,405	0/0:22,0:22:66.22:0,66,923
chr10	102334896	.	AATAGATAGATAG	A	5019.19	PASS	AB=0.815;AC=18;AF=0.346;AN=52;BaseQRankSum=2.646;DP=667;FS=5.347;HRun=0;HaplotypeScore=292.2978;InbreedingCoeff=-0.0765;MQ=46.18;MQ0=22;MQRankSum=-8.025;QD=12.94;ReadPosRankSum=-4.345;VQSLOD=1.8862;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:35.68:0,36,1375	0/0:8,0:8:9.03:0,9,391	./.	./.	0/0:18,0:36:45.15:0,45,1090	0/1:20,4:24:99:425,0,270	0/0:15,9:23:21.07:0,21,404	0/1:58,0:41:57.05:323,0,57	0/1:18,0:26:99:185,0,671	0/0:28,0:27:45.14:0,45,2178	0/0:37,0:36:57.11:0,57,2733	0/0:27,0:27:54.18:0,54,2226	0/0:16,0:16:36.12:0,36,1567	0/1:10,5:15:99:484,0,490	0/1:19,7:25:40.82:736,0,41	0/0:21,0:21:42.14:0,42,1931	0/1:10,8:18:91.19:91,0,169	0/1:20,0:20:5.06:5,0,509	0/1:14,1:14:99:275,0,124	1/1:14,8:22:10.63:332,11,0	1/1:11,1:10:1:101,1,0	0/1:8,15:22:99:614,0,152	0/1:22,11:31:99:187,0,618	0/0:9,6:15:12.04:0,12,176	0/1:14,12:25:99:658,0,544	0/1:38,0:34:43.05:43,0,2898	1/1:14,17:29:22.54:560,23,0	0/0:23,0:23:60.54:0,61,2265
chr10	102335055	.	CGATA	C	6232.32	PASS	AB=0.850;AC=16;AF=0.286;AN=56;BaseQRankSum=13.299;DP=589;FS=1.244;HRun=0;HaplotypeScore=108.5610;InbreedingCoeff=0.6857;MQ=55.60;MQ0=3;MQRankSum=-1.942;QD=26.52;ReadPosRankSum=2.651;VQSLOD=4.8965;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:20:25.23:25,0,100	0/0:14,0:14:36.12:0,36,877	0/0:22,0:11:15.05:0,15,348	0/0:14,0:8:8.80:0,9,136	0/0:27,0:27:66.23:0,66,1602	0/0:21,0:21:51.18:0,51,1205	0/0:15,0:13:27.09:0,27,668	1/1:17,22:38:66.12:1012,66,0	0/0:20,0:20:45.14:0,45,1023	0/0:27,0:27:51.18:0,51,1259	0/0:30,0:30:69.24:0,69,1654	0/0:19,0:19:44.88:0,45,1001	0/0:20,0:20:54.19:0,54,1306	0/0:11,0:11:27.09:0,27,638	0/0:15,0:15:27.09:0,27,610	0/0:21,0:21:60.19:0,60,1409	0/0:26,0:26:63.21:0,63,1488	0/1:9,0:11:20.75:65,0,21	1/1:6,14:20:17.31:578,17,0	1/1:8,38:46:99:1617,99,0	1/1:6,18:23:43.96:707,44,0	0/1:11,0:11:0.51:1,0,470	0/0:23,0:23:51.16:0,51,1210	0/0:10,0:10:18.06:0,18,445	0/0:19,0:19:45.15:0,45,1113	0/1:3,23:25:7.97:987,0,8	1/1:3,17:18:39.05:638,39,0	1/1:3,15:18:36.12:602,36,0
chr10	102335713	.	CA	C	8849.92	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=4.091;DP=825;FS=3.967;HRun=5;HaplotypeScore=110.2021;InbreedingCoeff=0.9976;MQ=77.27;MQ0=0;MQRankSum=-1.594;QD=29.90;ReadPosRankSum=5.569;VQSLOD=4.3005;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:64:99:0,184,2428	0/0:11,0:11:33.11:0,33,451	0/0:22,0:22:57.09:0,57,728	0/0:14,0:14:30.10:0,30,408	0/0:27,0:27:75.23:0,75,1004	1/1:0,29:29:84.24:953,84,0	1/1:0,27:27:72.21:817,72,0	0/0:34,0:34:93.31:0,93,1271	1/1:3,27:30:15.25:751,15,0	0/0:27,0:27:78.24:0,78,1025	0/0:18,0:18:48.16:0,48,656	0/0:31,0:31:90.30:0,90,1221	0/0:30,0:30:87.27:0,87,1159	1/1:0,20:20:57.16:647,57,0	1/1:3,32:35:90.25:1021,90,0	0/0:35,0:35:99:0,102,1393	1/1:1,29:30:81.23:919,81,0	0/0:27,0:27:75.21:0,75,1002	0/0:20,0:20:60.20:0,60,819	0/0:27,0:27:72.23:0,72,970	0/0:37,0:37:99:0,99,1348	1/1:0,33:33:90.26:1021,90,0	1/1:1,28:29:78.14:884,78,0	1/1:1,38:39:99:1123,99,0	1/1:2,22:24:63.18:715,63,0	0/0:40,0:40:99:0,117,1572	0/0:39,0:39:99:0,117,1582	0/0:26,0:26:78.26:0,78,1067
chr10	102336005	.	G	GT	848.12	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.635;DP=730;FS=5.723;HRun=1;HaplotypeScore=118.2997;InbreedingCoeff=0.9990;MQ=80.40;MQ0=0;MQRankSum=-3.456;QD=32.62;ReadPosRankSum=2.223;VQSLOD=3.2190;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:63.21:943,63,0	0/0:12,0:12:36.12:0,36,467	0/0:20,0:20:57.14:0,57,683	0/0:19,0:19:50.99:0,51,597	0/0:29,0:29:83.36:0,83,1017	0/0:29,0:29:84.19:0,84,1014	0/0:24,0:24:69.22:0,69,895	0/0:24,0:24:72.22:0,72,921	0/0:24,0:24:72.21:0,72,918	0/0:34,0:34:99:0,99,1233	0/0:14,0:14:39.11:0,39,480	0/0:31,0:31:90.26:0,90,1137	0/0:29,0:29:84.27:0,84,1082	0/0:32,0:32:90.24:0,90,1121	0/0:45,0:45:99:0,135,1725	0/0:27,0:27:81.19:0,81,990	0/0:24,0:24:66.20:0,66,842	0/0:10,0:10:30.03:0,30,368	0/0:11,0:11:33.08:0,33,411	0/0:34,0:34:99:0,99,1205	0/0:46,0:46:99:0,134,1692	0/0:24,0:24:72.19:0,72,901	0/0:33,0:33:87.22:0,87,1069	0/0:18,0:18:54.12:0,54,662	0/0:20,0:20:57.15:0,57,698	0/0:32,0:32:93.20:0,93,1145	0/0:35,0:34:99:0,102,1304	0/0:24,0:24:60.12:0,60,727
chr10	102336396	.	CTCTCTG	C	5532.65	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.111;DP=683;FS=0.000;HRun=0;HaplotypeScore=153.9943;InbreedingCoeff=0.9692;MQ=72.41;MQ0=3;MQRankSum=-8.508;QD=27.80;ReadPosRankSum=-4.155;VQSLOD=3.8772;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,39:45:56.93:958,57,0	0/0:13,0:13:33.10:0,33,952	0/0:38,0:30:40.02:0,40,719	0/0:34,0:31:49.80:0,50,1176	0/0:20,0:20:48.13:0,48,1385	0/0:25,0:25:51.17:0,51,1591	0/0:20,0:20:39.12:0,39,1170	1/1:9,33:41:96.11:1544,96,0	0/0:19,0:20:51.14:0,51,1560	0/0:28,0:28:66.23:0,66,2095	0/0:15,0:15:45.10:0,45,1087	0/0:33,0:33:81.25:0,81,2284	0/0:30,0:30:66.23:0,66,2121	0/0:22,0:22:42.10:0,42,1049	0/0:25,0:25:54.17:0,54,1658	0/0:24,0:24:60.18:0,60,1823	0/0:18,0:18:42.09:0,42,1274	0/0:22,0:22:60.16:0,60,1681	1/1:6,13:19:39.04:611,39,0	1/1:11,16:27:29.12:497,29,0	1/1:3,12:15:2.97:20,3,0	0/0:22,0:22:54.17:0,54,1677	0/0:16,0:16:30.08:0,30,834	0/0:39,0:39:99:0,99,3119	0/0:20,0:20:45.14:0,45,1393	1/1:12,7:19:24.98:695,25,0	1/1:11,13:24:47.68:832,48,0	1/1:3,5:8:21.05:376,21,0
chr10	102336448	.	G	GTC	2496.77	PASS	AB=0.890;AC=13;AF=0.232;AN=56;BaseQRankSum=7.624;DP=780;FS=1.438;HRun=0;HaplotypeScore=170.1077;InbreedingCoeff=0.6726;MQ=52.52;MQ0=13;MQRankSum=-11.006;QD=10.90;ReadPosRankSum=-2.931;VQSLOD=2.8701;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:46,0:53:12.63:17,0,13	0/0:14,0:14:42.07:0,42,497	0/0:30,0:15:17.80:0,18,166	0/0:39,0:21:1.75:0,2,146	0/0:22,0:22:57.17:0,57,722	0/0:34,0:33:71.38:0,71,683	0/0:21,0:21:35.56:0,36,379	1/1:33,7:38:77.44:1027,77,0	0/0:20,0:20:35.59:0,36,388	0/0:27,0:27:48.15:0,48,611	0/0:20,0:20:45.14:0,45,565	0/0:26,0:26:72.23:0,72,914	0/0:30,0:30:72.21:0,72,898	0/0:22,0:22:48.04:0,48,493	0/0:32,0:32:77.69:0,78,728	0/0:31,0:31:90.27:0,90,1122	0/0:31,0:30:70.07:0,70,699	0/0:16,0:15:5.55:0,6,348	1/1:13,8:18:16.13:560,16,0	1/1:17,9:26:6.44:93,6,0	0/1:12,4:15:0.01:0,0,0	0/0:29,0:29:59.39:0,59,656	0/0:24,0:23:53.91:0,54,549	0/0:54,0:53:92.80:0,93,930	0/0:29,0:29:47.98:0,48,455	0/1:31,0:31:43.32:318,0,43	1/1:19,14:32:53.68:606,54,0	1/1:6,0:7:5.90:44,6,0
chr10	102336454	.	CTCTCTG	C	1124.01	PASS	AB=0.931;AC=5;AF=0.089;AN=56;BaseQRankSum=4.455;DP=786;FS=5.004;HRun=0;HaplotypeScore=222.8139;InbreedingCoeff=0.0387;MQ=51.79;MQ0=9;MQRankSum=-4.991;QD=8.14;ReadPosRankSum=-6.350;VQSLOD=0.7945;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:55:16.25:0,16,465	0/0:14,0:14:42.01:0,42,1037	0/0:23,0:10:17.78:0,18,210	0/0:32,0:15:13.43:0,13,320	0/0:25,0:25:71.51:0,72,2020	0/0:38,0:37:80.22:0,80,2132	0/0:22,0:22:39.54:0,40,853	0/1:40,0:38:99:355,0,238	0/0:19,0:19:38.74:0,39,856	0/0:29,0:29:52.79:0,53,1766	0/0:21,0:21:54.08:0,54,1392	0/0:25,0:25:75.20:0,75,2243	0/0:31,0:31:78.10:0,78,2192	0/0:21,0:21:51.12:0,51,1255	0/0:34,0:34:78.13:0,78,2311	0/0:32,0:32:96.30:0,96,2885	0/0:33,0:32:73.77:0,74,2205	0/0:16,0:15:18.31:0,18,721	0/1:20,2:20:99:276,0,464	0/1:27,0:27:41.10:408,0,41	0/1:15,0:14:0.03:0,0,0	0/0:33,0:33:66:0,66,1392	0/0:24,0:24:54.14:0,54,1408	0/0:55,0:54:95.11:0,95,2377	0/0:27,0:27:51.13:0,51,1350	0/0:32,0:31:36.14:0,36,776	0/1:22,12:34:99:194,0,282	0/0:6,0:6:7.12:0,7,143
chr10	102336456	.	C	CTG	1812.76	PASS	AB=0.931;AC=8;AF=0.143;AN=56;BaseQRankSum=10.880;DP=786;FS=0.000;HRun=0;HaplotypeScore=177.1152;InbreedingCoeff=0.3254;MQ=51.93;MQ0=8;MQRankSum=-11.854;QD=9.91;ReadPosRankSum=-1.282;VQSLOD=3.0362;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:55:28.53:0,29,248	0/0:14,0:14:42.14:0,42,631	0/0:22,0:9:24.01:0,24,320	0/0:32,0:13:27.47:0,27,355	0/0:25,0:25:72.15:0,72,991	0/0:36,0:35:81.09:0,81,1119	0/0:21,0:21:39.10:0,39,553	0/1:42,0:40:14.79:490,0,15	0/0:19,0:19:39.55:0,40,563	0/0:30,0:30:82.76:0,83,1051	0/0:20,0:20:54.14:0,54,763	0/0:25,0:25:75.24:0,75,1121	0/0:29,0:29:81.22:0,81,1165	0/0:21,0:21:51.16:0,51,743	0/0:34,0:34:78.26:0,78,1144	0/0:33,0:33:96.30:0,96,1422	0/0:33,0:32:81.17:0,81,1111	0/0:18,0:17:16.16:0,16,527	0/1:22,0:20:77.16:288,0,77	0/1:26,0:26:39.98:81,0,40	0/1:15,0:14:0.06:0,0,0	0/0:33,0:33:71.91:0,72,987	0/0:23,0:23:54.18:0,54,803	0/0:53,0:52:99:0,99,1430	0/0:26,0:26:51.16:0,51,745	0/1:24,14:37:99:693,0,99	1/1:34,0:33:22.61:301,23,0	0/1:5,1:6:0.47:96,0,0
chr10	102336460	.	GTC	G	399.32	PASS	AB=0.823;AC=3;AF=0.054;AN=56;BaseQRankSum=5.588;DP=775;FS=2.111;HRun=0;HaplotypeScore=177.3831;InbreedingCoeff=0.0021;MQ=52.55;MQ0=9;MQRankSum=-1.233;QD=7.01;ReadPosRankSum=-2.297;VQSLOD=2.9843;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:54:36.37:0,36,448	0/1:15,0:15:37.81:38,0,376	0/0:19,0:7:5.82:0,6,35	0/0:25,0:9:10.56:0,11,96	0/0:25,0:25:35.79:0,36,938	0/0:36,0:35:66.04:0,66,729	0/0:22,0:22:30.03:0,30,303	0/0:40,0:37:21.09:0,21,198	0/0:21,0:21:29.99:0,30,330	0/0:29,0:28:72.69:0,73,1061	0/0:21,0:21:48.13:0,48,725	0/0:27,0:27:72.13:0,72,1003	0/0:25,1:26:34.94:0,35,949	0/0:22,0:22:10.93:0,11,474	0/0:35,0:35:72.14:0,72,775	0/0:31,1:32:53.11:0,53,1232	0/0:34,0:32:77.43:0,77,825	0/0:17,0:16:32.98:0,33,417	0/0:21,0:20:24.80:0,25,311	0/0:27,0:27:0.36:0,0,43	0/0:16,0:15:1.53:0,2,4	0/0:33,0:33:47.72:0,48,513	0/0:22,0:22:23.33:0,23,455	0/0:53,0:53:48.33:0,48,745	0/0:26,0:26:48.11:0,48,543	0/1:22,14:35:99:410,0,116	0/0:33,0:32:15.95:0,16,145	0/1:4,2:6:26.38:51,0,26
chr10	102336464	.	C	CTG	503.22	PASS	AB=0.926;AC=5;AF=0.089;AN=56;BaseQRankSum=9.306;DP=777;FS=0.000;HRun=0;HaplotypeScore=182.4606;InbreedingCoeff=-0.0916;MQ=52.98;MQ0=10;MQRankSum=-6.513;QD=3.67;ReadPosRankSum=1.405;VQSLOD=2.8512;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:53:25.87:0,26,455	0/0:13,0:13:38.81:0,39,505	0/0:16,0:5:5.98:0,6,63	0/0:23,0:9:18.14:0,18,182	0/0:25,0:25:72.16:0,72,1012	0/0:35,0:34:27.25:0,27,278	0/0:22,0:22:22.47:0,22,252	0/0:35,0:32:45.19:0,45,281	0/0:23,0:23:12.71:0,13,245	0/0:32,0:31:67.86:0,68,1175	0/0:21,0:21:54.15:0,54,779	0/0:28,0:28:81.15:0,81,1113	0/0:28,0:28:78.09:0,78,1079	0/0:23,0:23:25.37:0,25,241	0/0:39,0:39:27.70:0,28,327	0/0:32,0:32:93.25:0,93,1343	0/1:34,0:32:20.31:20,0,334	0/0:15,0:14:32.77:0,33,335	0/1:21,0:20:21.04:21,0,140	0/0:27,0:27:24.90:0,25,202	0/0:17,0:16:4.49:0,4,27	0/0:32,0:31:38.94:0,39,450	0/0:23,0:23:28.41:0,28,343	0/0:51,0:50:42.71:0,43,392	0/0:26,0:26:22.06:0,22,102	0/1:24,14:38:99:517,0,106	0/1:35,0:34:21.16:21,0,87	0/1:8,1:9:13.12:40,0,13
chr10	102336475	.	T	TCA	7948.29	PASS	AB=0.725;AC=35;AF=0.625;AN=56;BaseQRankSum=-2.986;DP=817;FS=2.096;HRun=0;HaplotypeScore=166.1902;InbreedingCoeff=0.7168;MQ=54.11;MQ0=14;MQRankSum=-2.402;QD=14.09;ReadPosRankSum=0.698;VQSLOD=4.7957;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:51:40.62:0,41,425	0/0:14,0:14:36:0,36,367	1/1:19,0:4:3.28:9,3,0	0/1:26,0:10:23.72:30,0,24	0/0:27,0:27:60.10:0,60,682	1/1:6,27:32:51.17:818,51,0	1/1:9,16:25:10.25:234,10,0	1/1:35,0:32:16.21:354,16,0	1/1:6,20:27:2.92:280,3,0	0/0:36,0:35:58.65:0,59,866	0/0:17,0:18:44.87:0,45,518	0/0:28,0:28:60.10:0,60,651	0/0:30,0:30:72.10:0,72,772	1/1:7,18:25:25.66:513,26,0	1/1:8,36:44:51.16:819,51,0	0/0:32,0:32:75.18:0,75,868	0/1:11,26:36:24.57:755,0,25	0/0:16,0:15:31.24:0,31,321	1/1:18,0:20:40.84:338,41,0	1/1:26,0:28:37.22:345,37,0	1/1:17,0:16:14.96:142,15,0	1/1:11,26:37:10.04:324,10,0	0/1:8,18:26:8.60:358,0,9	1/1:9,39:49:57.14:878,57,0	1/1:2,26:28:19.57:649,20,0	1/1:28,10:38:40.05:637,40,0	1/1:27,0:33:37.81:310,38,0	1/1:9,1:10:14.93:155,15,0
chr10	102337747	.	TATAGGGAGCACTAGGACTCATAGGGAGCACTAGGACTC	T	3765.76	PASS	AC=32;AF=0.593;AN=54;BaseQRankSum=6.035;DP=483;FS=3.100;HRun=0;HaplotypeScore=424.8453;InbreedingCoeff=0.8832;MQ=79.01;MQ0=3;MQRankSum=-3.852;QD=15.43;ReadPosRankSum=-2.280;VQSLOD=0.7279;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:56.99:0,57,2057	0/0:13,0:13:36.10:0,36,2779	0/0:35,0:27:14.16:0,14,178	0/0:30,0:24:18.63:0,19,310	0/0:14,0:14:20.82:0,21,1373	./.	1/1:24,0:24:14.58:101,15,0	1/1:21,0:21:23.72:198,24,0	1/1:14,0:14:11.84:190,12,0	0/0:23,0:23:57.16:0,57,3339	0/0:13,0:13:29.94:0,30,1984	0/0:24,0:24:66.07:0,66,4997	0/0:12,0:12:27.08:0,27,1863	1/1:9,0:9:5.68:28,6,0	1/1:13,0:13:6.01:135,6,0	0/0:12,0:12:36.09:0,36,2885	1/1:24,0:23:26.62:524,27,0	0/0:19,0:19:39.06:0,39,2761	1/1:9,6:13:17.76:279,18,0	1/1:5,14:19:17.60:182,18,0	1/1:21,0:21:8.92:114,9,0	1/1:8,0:8:6.01:75,6,0	1/1:5,8:13:0.94:3,1,0	1/1:15,0:15:17.44:335,17,0	1/1:10,0:10:17.71:285,18,0	1/1:8,20:28:50.92:883,51,0	1/1:3,0:3:5.52:105,6,0	1/1:7,0:7:14.81:329,15,0
chr10	102337873	.	AGT	A	241.78	PASS	AB=0.983;AC=15;AF=0.313;AN=48;BaseQRankSum=-1.082;DP=603;FS=2.670;HRun=0;HaplotypeScore=132.9563;InbreedingCoeff=-0.0258;MQ=66.10;MQ0=18;MQRankSum=1.378;QD=0.95;ReadPosRankSum=1.472;VQSLOD=2.5419;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:0:0,0,0	0/1:7,1:8:40.38:40,0,76	./.	0/0:52,0:35:0:0,0,1	0/0:12,0:12:6.02:0,6,83	0/0:15,0:15:3.45:0,3,22	0/0:37,0:36:9.09:0,9,48	./.	0/0:25,0:26:4.19:0,4,18	0/1:14,0:14:23.60:24,0,41	0/1:6,0:6:9.08:9,0,50	1/1:17,1:19:9.60:86,10,0	0/1:20,0:21:21.36:21,0,35	0/0:19,0:20:0.89:0,1,2	1/1:28,0:27:0.03:0,0,0	0/1:25,0:25:20.21:20,0,101	0/0:20,0:19:8.88:0,9,75	1/1:11,2:12:10.42:86,10,0	0/0:14,0:12:2.04:0,2,6	0/1:24,0:22:18.29:24,0,18	0/1:57,0:57:26.10:46,0,26	0/0:13,0:14:1.25:0,1,3	./.	./.	0/0:11,0:12:2.44:0,2,6	0/0:20,0:18:8.93:0,9,64	0/1:18,0:18:12.24:12,0,115	0/0:11,0:8:2.98:0,3,21
chr10	102337905	.	T	TGTGTTG	2043.19	PASS	AB=0.906;AC=19;AF=0.339;AN=56;BaseQRankSum=2.704;DP=560;FS=3.997;HRun=0;HaplotypeScore=172.8279;InbreedingCoeff=0.2102;MQ=38.58;MQ0=41;MQRankSum=-2.331;QD=6.57;ReadPosRankSum=-1.910;VQSLOD=2.4460;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:15:11.85:12,0,25	0/0:7,0:7:18.06:0,18,334	0/0:26,0:6:5.95:0,6,53	0/0:39,0:7:3.86:0,4,69	0/0:9,0:9:9.03:0,9,185	1/1:16,1:17:24.35:263,24,0	0/1:33,0:33:16.77:300,0,17	0/1:32,0:27:99:148,0,156	0/1:19,3:22:44.10:532,0,44	0/0:19,0:18:47.64:0,48,681	0/0:10,0:9:23.98:0,24,363	0/0:21,0:20:37.84:0,38,662	0/0:22,0:22:46.95:0,47,639	0/1:14,0:15:3.72:11,0,4	1/1:22,3:25:15.32:427,15,0	0/0:18,0:18:39.12:0,39,622	0/1:13,2:15:97.94:193,0,98	0/0:19,0:17:42.09:0,42,566	0/0:13,0:11:17.42:0,17,121	0/0:14,0:12:11.73:0,12,135	0/1:57,0:52:16.29:16,0,92	1/1:14,1:12:2.82:78,3,0	1/1:6,0:5:2.84:14,3,0	0/0:15,0:13:1.47:0,1,4	1/1:18,0:16:12.02:205,12,0	0/1:20,0:17:10.51:11,0,197	0/0:17,0:16:25.18:0,25,313	0/1:6,0:8:4.36:4,0,61
chr10	102337909	.	T	TTG	815.19	PASS	AB=0.985;AC=12;AF=0.222;AN=54;BaseQRankSum=1.044;DP=541;FS=10.901;HRun=0;HaplotypeScore=155.1541;InbreedingCoeff=0.2259;MQ=37.28;MQ0=44;MQRankSum=0.447;QD=4.97;ReadPosRankSum=-0.968;VQSLOD=2.2006;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:15:2.98:0,3,32	0/0:7,0:7:18.05:0,18,249	0/0:24,0:2:6.02:0,6,76	0/0:36,0:5:0.56:0,1,96	0/0:8,0:8:8.90:0,9,144	1/1:18,0:19:11.71:145,12,0	0/1:30,1:29:75.43:133,0,75	0/0:32,0:27:56.39:0,56,678	0/1:19,0:19:99:208,0,116	0/0:18,0:17:5.22:0,5,552	0/0:11,0:10:26.98:0,27,382	0/0:20,0:19:51.08:0,51,638	0/0:21,0:21:47.96:0,48,603	0/1:12,0:12:1.30:1,0,19	0/1:23,0:22:8.58:247,0,9	0/0:17,0:17:42.05:0,42,598	0/1:15,1:15:46.42:46,0,169	0/0:21,0:19:42.55:0,43,523	0/1:10,0:10:6.94:7,0,234	0/0:14,0:11:17.41:0,17,199	0/0:57,0:52:27.05:0,27,317	1/1:12,1:10:3.01:36,3,0	./.	0/0:13,0:11:2.96:0,3,20	1/1:20,0:18:9.88:137,10,0	0/0:24,0:18:40.82:0,41,472	0/0:16,0:15:36.93:0,37,445	0/0:12,0:10:9.23:0,9,145
chr10	102337923	.	GGT	G	1956.88	PASS	AB=0.865;AC=32;AF=0.571;AN=56;BaseQRankSum=6.645;DP=548;FS=8.058;HRun=0;HaplotypeScore=146.2008;InbreedingCoeff=0.2340;MQ=35.74;MQ0=44;MQRankSum=-9.305;QD=5.67;ReadPosRankSum=-3.910;VQSLOD=1.8641;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,4:14:5.90:51,6,0	0/1:5,1:6:28.01:28,0,50	0/0:48,1:3:2.33:0,2,8	0/0:52,0:3:5.64:0,6,27	0/0:10,0:10:12.04:0,12,181	1/1:10,7:17:2.61:185,3,0	1/1:21,9:26:17.80:192,18,0	1/1:13,8:17:27.05:314,27,0	1/1:12,8:20:22.23:235,22,0	0/0:19,1:19:5.48:0,5,560	0/1:15,0:14:8.47:8,0,321	0/0:25,0:24:14.42:0,14,676	0/1:14,0:14:13.44:13,0,286	1/1:5,6:11:6:70,6,0	1/1:12,6:17:8.79:82,9,0	0/1:12,1:13:5.45:5,0,408	0/1:11,2:12:28.83:29,0,40	0/0:20,0:18:21.04:0,21,288	1/1:7,4:8:9.01:96,9,0	0/0:11,3:11:4.75:0,5,39	0/1:38,9:41:7.09:91,0,7	1/1:12,3:12:5.93:51,6,0	1/1:6,2:7:3:25,3,0	0/0:8,4:11:3.01:0,3,36	1/1:13,9:20:14.88:166,15,0	0/1:12,11:18:32.15:320,0,32	0/1:8,4:10:11.71:64,0,12	1/1:4,5:8:9.03:106,9,0
chr10	102337941	.	TTG	T	301.87	PASS	AB=0.944;AC=11;AF=0.196;AN=56;BaseQRankSum=5.149;DP=627;FS=2.301;HRun=0;HaplotypeScore=149.9266;InbreedingCoeff=-0.0687;MQ=34.52;MQ0=68;MQRankSum=-4.002;QD=1.56;ReadPosRankSum=0.492;VQSLOD=2.5419;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,1:18:1.77:0,2,4	0/0:7,0:7:16.61:0,17,239	0/0:86,0:7:14.51:0,15,123	0/0:92,0:6:3.05:0,3,145	0/0:8,0:8:12.04:0,12,230	0/0:19,0:18:10.67:0,11,64	0/1:28,0:24:3.33:3,0,46	0/0:33,0:23:26.75:0,27,233	0/1:20,1:21:66.20:66,0,107	0/0:19,0:17:37.58:0,38,860	0/0:14,0:13:28.30:0,28,494	0/0:22,0:22:28.03:0,28,824	0/0:13,0:13:1.88:0,2,486	0/1:10,0:10:13.85:14,0,26	0/0:15,0:14:7.66:0,8,46	0/0:13,0:13:27.18:0,27,615	0/1:10,1:10:30.93:31,0,53	0/0:15,1:14:9.60:0,10,389	0/0:12,0:6:15.51:0,16,202	0/1:14,1:12:36.13:52,0,36	0/1:42,6:42:10.54:30,0,11	0/0:10,1:9:6.68:0,7,34	0/0:13,0:11:7.40:0,7,42	0/0:20,1:19:2.57:0,3,28	0/1:20,0:18:8.87:17,0,9	0/1:23,2:20:92.93:93,0,116	1/1:6,2:6:7.10:65,7,0	0/1:6,1:7:36.30:72,0,36
chr10	102337948	.	ATGTGTGG	A	2695.32	PASS	AB=0.857;AC=33;AF=0.589;AN=56;BaseQRankSum=7.464;DP=649;FS=1.140;HRun=0;HaplotypeScore=163.1697;InbreedingCoeff=0.3961;MQ=36.10;MQ0=63;MQRankSum=-7.794;QD=5.90;ReadPosRankSum=-1.055;VQSLOD=2.6201;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:18:11.45:11,0,25	0/0:8,0:8:18.06:0,18,589	0/1:80,0:6:21.93:22,0,163	0/0:85,0:5:12.04:0,12,249	0/0:8,0:7:15.52:0,16,367	1/1:10,10:19:4.55:428,5,0	1/1:17,14:28:9.06:135,9,0	1/1:30,0:21:24.08:305,24,0	1/1:20,1:21:27.10:361,27,0	0/0:23,0:19:44.29:0,44,1074	0/0:14,0:14:30.09:0,30,558	0/0:24,0:24:57.15:0,57,1544	0/1:15,0:14:43.01:43,0,672	1/1:12,1:13:8.93:128,9,0	1/1:18,0:16:4.35:49,4,0	0/0:13,0:13:36.08:0,36,787	1/1:14,0:13:20.67:151,21,0	0/0:17,0:15:16.22:0,16,581	0/1:11,0:6:39.52:40,0,66	0/1:15,0:13:11.54:64,0,12	1/1:49,0:43:9.33:119,9,0	1/1:10,1:9:1.27:37,1,0	1/1:13,0:12:5.73:44,6,0	1/1:25,0:22:2.70:26,3,0	1/1:19,1:18:11.43:204,11,0	0/1:18,0:23:1.25:459,0,1	1/1:9,0:9:8.84:91,9,0	0/1:6,0:7:3.71:169,0,4
chr10	102337949	.	TGTGTG	T	2991.65	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=6.826;DP=639;FS=2.507;HRun=0;HaplotypeScore=152.8926;InbreedingCoeff=0.3740;MQ=36.38;MQ0=62;MQRankSum=-7.626;QD=6.68;ReadPosRankSum=-0.432;VQSLOD=2.2754;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:18:11.78:12,0,32	0/0:8,0:8:18.06:0,18,486	0/1:76,0:6:18.97:19,0,145	0/0:83,0:5:12.04:0,12,210	0/0:8,0:7:15.48:0,15,287	1/1:21,0:19:4.52:259,5,0	1/1:30,1:27:9.33:172,9,0	1/1:27,0:18:24.08:305,24,0	1/1:12,9:21:27.14:467,27,0	0/0:23,0:19:47.47:0,47,948	0/0:14,0:14:30.08:0,30,470	0/0:24,0:24:57.62:0,58,1266	0/1:16,0:15:40:40,0,591	1/1:5,7:12:8.95:166,9,0	1/1:9,8:15:4.48:121,4,0	0/0:14,0:14:34.83:0,35,681	1/1:7,7:12:18.05:249,18,0	0/0:17,0:15:21.40:0,21,483	0/1:11,0:6:27.67:28,0,66	1/1:17,0:14:5.10:50,5,0	1/1:50,0:44:11.84:122,12,0	1/1:8,3:9:1.45:108,1,0	1/1:6,8:12:8.98:134,9,0	1/1:8,16:21:3.01:62,3,0	1/1:13,7:18:11.59:280,12,0	0/1:29,0:23:14.78:383,0,15	0/1:10,0:9:12.07:64,0,12	0/1:8,0:7:3.71:141,0,4
chr10	102337953	.	TG	T	2112.14	PASS	AB=0.862;AC=35;AF=0.625;AN=56;BaseQRankSum=8.359;DP=627;FS=0.517;HRun=2;HaplotypeScore=145.0821;InbreedingCoeff=0.5164;MQ=37.16;MQ0=56;MQRankSum=-9.059;QD=4.81;ReadPosRankSum=-0.491;VQSLOD=0.1613;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,3:18:11.94:12,0,31	0/0:8,1:9:19.30:0,19,260	0/1:66,2:6:0.95:1,0,129	0/0:75,1:5:12.04:0,12,160	0/0:9,0:8:18.02:0,18,229	1/1:13,8:19:3.48:155,3,0	1/1:18,13:27:9.34:135,9,0	1/1:8,19:19:29.97:345,30,0	1/1:13,8:21:26.33:234,26,0	0/0:23,0:20:53.61:0,54,717	0/0:13,0:13:28.93:0,29,328	0/0:27,0:27:42.50:0,43,799	0/1:14,2:15:40.02:40,0,376	1/1:9,3:12:8.57:46,9,0	1/1:9,7:15:4.43:28,4,0	0/0:16,0:16:47.01:0,47,596	1/1:10,5:13:17.11:198,17,0	0/0:14,1:13:15.68:0,16,307	0/1:10,1:5:24.01:24,0,66	1/1:11,7:15:10.22:123,10,0	1/1:18,30:42:20.56:143,21,0	1/1:4,7:10:1.77:45,2,0	1/1:11,3:12:8.97:92,9,0	1/1:19,5:21:2.87:16,3,0	1/1:11,9:18:11.31:97,11,0	1/1:20,7:22:1.58:335,2,0	1/1:8,3:10:14.51:134,15,0	0/1:4,4:7:3.81:101,0,4
chr10	102337954	.	G	GT	2217.77	PASS	AB=0.955;AC=34;AF=0.607;AN=56;BaseQRankSum=7.886;DP=614;FS=3.288;HRun=1;HaplotypeScore=139.4310;InbreedingCoeff=0.4099;MQ=37.69;MQ0=53;MQRankSum=-8.402;QD=5.01;ReadPosRankSum=-0.005;VQSLOD=0.3334;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:12.01:12,0,31	0/0:9,0:9:19.30:0,19,244	0/1:68,0:6:0.95:1,0,128	0/0:71,0:5:12.04:0,12,160	0/0:8,0:8:18.02:0,18,222	0/1:21,0:19:5.03:99,0,5	1/1:31,0:27:9.35:135,9,0	1/1:26,1:19:30.49:358,30,0	1/1:19,0:19:23.26:223,23,0	0/0:23,0:20:53.61:0,54,692	0/0:10,0:14:29.93:0,30,350	0/0:28,0:28:32.02:0,32,786	0/1:15,0:14:40.02:40,0,367	1/1:12,0:12:3.46:12,3,0	1/1:16,0:15:4.15:30,4,0	0/0:14,0:16:48.11:0,48,610	1/1:15,2:15:17.38:210,17,0	0/1:10,0:16:2.44:2,0,258	0/1:10,0:4:24.17:24,0,66	1/1:12,4:13:10.24:169,10,0	1/1:38,8:41:16.03:145,16,0	0/1:11,0:10:0.81:32,0,1	1/1:13,0:12:8.92:109,9,0	1/1:23,2:22:2.80:13,3,0	1/1:17,0:15:6.60:89,7,0	1/1:25,0:21:2.21:412,2,0	1/1:10,0:9:14.58:147,15,0	0/1:8,0:7:3.71:140,0,4
chr10	102337958	.	T	TTG	936.51	PASS	AB=0.980;AC=10;AF=0.179;AN=56;BaseQRankSum=6.787;DP=632;FS=11.124;HRun=0;HaplotypeScore=156.3874;InbreedingCoeff=-0.0115;MQ=38.46;MQ0=52;MQRankSum=-4.787;QD=4.13;ReadPosRankSum=-5.824;VQSLOD=-0.0807;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:4.71:0,5,71	0/0:9,0:9:21.07:0,21,327	0/1:60,0:7:14.12:14,0,67	0/0:65,0:4:12.04:0,12,174	0/0:10,0:9:17.92:0,18,263	0/0:23,0:21:22.70:0,23,164	0/0:36,0:32:19.29:0,19,145	0/1:29,0:21:99:148,0,211	0/0:20,0:20:22.96:0,23,178	0/0:23,0:20:58.03:0,58,832	0/0:13,0:13:29.97:0,30,423	0/0:28,0:28:62.79:0,63,996	0/0:20,0:19:42.42:0,42,586	0/0:15,0:15:11.81:0,12,97	0/0:18,0:17:5.22:0,5,55	0/0:18,0:18:48.11:0,48,699	0/1:18,0:16:16.82:17,0,120	0/0:17,0:15:24.90:0,25,311	0/1:11,0:4:26.08:26,0,85	0/1:13,3:13:17.99:242,0,18	1/1:43,5:43:38.85:314,39,0	0/0:13,0:12:7.31:0,7,62	0/0:13,0:12:8.76:0,9,80	0/0:29,0:26:11.30:0,11,106	0/0:17,0:15:14.34:0,14,87	0/1:25,0:21:99:110,0,254	0/1:11,0:10:18.26:167,0,18	0/1:8,0:7:46.93:47,0,85
chr10	102339426	.	AACAC	A	663.30	PASS	AB=0.839;AC=22;AF=0.440;AN=50;BaseQRankSum=3.123;DP=499;FS=10.532;HRun=0;HaplotypeScore=93.9697;InbreedingCoeff=0.2628;MQ=67.31;MQ0=4;MQRankSum=-0.311;QD=3.02;ReadPosRankSum=-1.572;VQSLOD=0.7615;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:48.16:0,48,901	0/0:4,0:4:5.99:0,6,85	./.	./.	0/1:17,1:18:37.19:37,0,55	0/1:10,3:13:29.97:83,0,30	0/1:10,1:12:3.55:53,0,4	0/0:17,0:17:2.97:0,3,20	1/1:11,1:12:3.01:46,3,0	0/0:13,0:13:15:0,15,223	0/0:14,0:14:3.01:0,3,65	0/0:11,0:17:17.44:0,17,100	0/1:8,1:9:17.94:40,0,18	1/1:5,2:7:3.01:46,3,0	1/1:24,0:25:2.79:26,3,0	0/1:8,1:12:31.46:31,0,71	1/1:18,5:22:4.31:89,4,0	0/0:10,0:15:18.03:0,18,256	0/0:25,0:23:18.05:0,18,307	0/0:15,0:21:15:0,15,195	0/0:32,0:32:27:0,27,375	1/1:13,3:16:3.01:46,3,0	1/1:12,2:14:3.48:47,3,0	1/1:14,7:21:11.87:185,12,0	1/1:13,5:18:3.01:46,3,0	0/1:14,0:20:46.79:47,0,58	0/0:11,0:14:23.65:0,24,288	./.
chr10	102339963	.	A	AGT	2131.90	PASS	AB=0.958;AC=30;AF=0.556;AN=54;BaseQRankSum=-0.177;DP=561;FS=12.412;HRun=0;HaplotypeScore=111.4149;InbreedingCoeff=0.2009;MQ=65.35;MQ0=7;MQRankSum=-0.575;QD=4.97;ReadPosRankSum=-3.108;VQSLOD=1.5536;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:30:2.11:90,2,0	0/0:9,0:8:11.86:0,12,110	0/1:25,0:17:0:0,0,0	./.	0/0:23,0:23:8.61:0,9,75	1/1:20,1:21:0.55:122,1,0	0/1:31,0:31:8.54:38,0,9	1/1:18,0:18:4.70:26,5,0	1/1:16,2:18:14.39:163,14,0	0/1:18,1:20:19.29:19,0,189	0/0:12,0:13:2.84:0,3,14	0/0:17,0:17:22.94:0,23,195	0/0:9,0:9:6.01:0,6,64	1/1:17,2:21:6.58:170,7,0	0/1:21,2:23:20.41:120,0,20	0/0:18,0:17:14.64:0,15,144	0/1:29,1:30:60.92:295,0,61	0/0:13,0:12:5.64:0,6,27	0/1:14,1:14:19.96:119,0,20	0/1:19,1:20:28.48:133,0,28	1/1:32,1:31:9.01:109,9,0	1/1:18,3:22:15.05:205,15,0	1/1:20,3:23:15.03:193,15,0	0/1:39,3:42:55.96:322,0,56	1/1:11,3:14:9.03:129,9,0	1/1:15,0:13:0.47:1,0,0	1/1:6,0:6:3.01:44,3,0	0/0:10,0:11:2.84:0,3,14
chr10	102340008	.	GGT	G	292.89	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.469;DP=578;FS=11.244;HRun=0;HaplotypeScore=113.5381;InbreedingCoeff=0.8764;MQ=59.11;MQ0=26;MQRankSum=-0.227;QD=6.51;ReadPosRankSum=-3.919;VQSLOD=1.5288;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,1:28:24.39:336,24,0	0/0:7,0:7:14.88:0,15,215	0/0:40,0:17:51:0,51,757	0/0:40,0:12:8.85:0,9,379	0/0:29,0:29:70.48:0,70,1096	0/0:14,0:14:30.56:0,31,452	0/0:17,0:16:30.96:0,31,436	0/0:8,0:7:18.02:0,18,253	0/0:15,0:15:39.13:0,39,581	0/0:34,0:34:75.97:0,76,1375	0/0:18,0:17:41.73:0,42,630	0/0:21,0:20:34.03:0,34,722	0/0:10,0:10:27.09:0,27,429	0/0:20,0:20:51.06:0,51,745	0/0:17,0:16:30.09:0,30,454	0/0:20,0:19:22.55:0,23,640	0/0:35,0:33:75.22:0,75,1076	1/1:3,12:16:5.77:67,6,0	0/0:16,0:15:39.13:0,39,624	0/0:26,0:26:71.14:0,71,1055	0/0:16,0:13:17.91:0,18,286	0/0:20,0:21:39.79:0,40,595	0/0:23,0:23:40.18:0,40,669	0/0:38,0:35:59.59:0,60,1219	0/0:17,0:17:34.26:0,34,554	0/0:13,0:12:33.11:0,33,519	0/0:14,0:14:33.58:0,34,502	0/0:4,0:4:12.01:0,12,160
chr10	102340016	.	A	AG	7594.66	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-1.218;DP=531;FS=0.512;HRun=7;HaplotypeScore=71.5929;InbreedingCoeff=0.9241;MQ=64.77;MQ0=20;MQRankSum=-0.881;QD=26.46;ReadPosRankSum=1.798;VQSLOD=5.5343;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:25.93:0,26,232	0/0:7,0:7:18.03:0,18,173	0/0:41,1:19:44.33:0,44,401	0/0:38,1:14:24.49:0,24,228	0/0:26,0:26:66.10:0,66,637	1/1:4,9:13:24.07:290,24,0	1/1:4,13:17:34.04:400,34,0	1/1:1,8:9:21.03:238,21,0	1/1:2,11:13:36.09:421,36,0	0/0:31,0:31:81.08:0,81,767	0/0:17,0:16:45.07:0,45,435	0/0:18,0:17:42.07:0,42,406	0/0:9,0:9:27.04:0,27,261	1/1:2,17:19:48.15:579,48,0	1/1:3,13:16:24.54:291,25,0	0/0:19,0:19:38.98:0,39,370	1/1:3,25:27:71.81:844,72,0	0/0:13,0:13:5.90:0,6,43	1/1:1,15:15:45.12:530,45,0	1/1:1,24:25:63.19:761,63,0	1/1:5,8:11:18.06:217,18,0	1/1:3,16:19:39.12:464,39,0	1/1:0,20:20:48.15:579,48,0	1/1:8,24:29:69.12:834,69,0	1/1:6,8:14:1.06:270,1,0	1/1:4,10:14:4.45:333,4,0	1/1:3,12:15:33.10:399,33,0	1/1:0,4:4:12.04:145,12,0
chr10	102340050	.	GA	G	488.27	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=3.900;DP=474;FS=7.675;HRun=7;HaplotypeScore=89.4263;InbreedingCoeff=0.6255;MQ=77.62;MQ0=3;MQRankSum=-0.717;QD=9.96;ReadPosRankSum=-0.151;VQSLOD=1.4853;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:57.13:581,57,0	0/0:9,0:9:24.07:0,24,287	0/0:30,0:19:38.61:0,39,340	0/1:27,0:20:9.35:9,0,213	0/0:22,0:22:60.19:0,60,754	0/0:13,0:13:33.07:0,33,386	0/0:16,0:16:45.13:0,45,553	0/0:25,0:25:63.20:0,63,793	0/0:12,0:12:36.10:0,36,440	0/0:32,0:32:87.19:0,87,1030	0/0:21,0:21:57.16:0,57,700	0/0:13,0:13:36.10:0,36,441	0/0:9,0:9:27.09:0,27,339	0/0:15,0:15:36.10:0,36,439	0/0:12,0:12:24.08:0,24,302	0/0:11,0:11:30.10:0,30,377	0/0:21,0:21:57.14:0,57,686	0/0:13,0:13:9.02:0,9,100	0/0:14,0:14:36.09:0,36,418	0/0:21,0:21:63.19:0,63,780	0/0:9,0:9:18.04:0,18,213	0/0:17,0:17:51.14:0,51,616	0/0:19,0:19:45.14:0,45,565	0/0:18,0:18:42.13:0,42,528	0/0:17,0:17:48.15:0,48,604	0/0:11,0:11:33.10:0,33,404	0/0:18,0:18:47.93:0,48,590	0/0:5,0:5:12.01:0,12,124
chr10	102340471	.	A	ATGTGTG	4807.19	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=4.318;DP=717;FS=9.939;HRun=0;HaplotypeScore=178.5672;InbreedingCoeff=0.6254;MQ=66.75;MQ0=7;MQRankSum=-6.780;QD=9.69;ReadPosRankSum=-3.162;VQSLOD=2.4837;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,13:48:5.59:190,6,0	0/0:9,0:9:9.03:0,9,183	0/0:32,0:18:2.71:0,3,36	0/0:41,0:28:1.55:0,2,4	0/0:18,0:18:12.41:0,12,166	1/1:19,6:26:6.91:137,7,0	1/1:30,0:30:3.48:82,3,0	0/1:36,0:36:11.59:242,0,12	1/1:17,2:22:9.03:288,9,0	0/0:27,0:27:25.44:0,25,438	0/0:20,0:21:9.09:0,9,569	0/0:25,0:25:15.04:0,15,259	0/0:15,0:19:14.73:0,15,285	1/1:10,1:16:6.02:135,6,0	1/1:20,7:30:12.04:328,12,0	0/0:29,0:29:20.84:0,21,343	1/1:13,0:21:6.90:75,7,0	1/1:12,0:16:9.03:226,9,0	1/1:25,0:25:18.05:407,18,0	1/1:20,0:23:3.59:10,4,0	1/1:28,0:28:2.58:43,3,0	1/1:18,4:24:3.01:96,3,0	1/1:9,4:14:6.02:193,6,0	1/1:23,12:37:6.02:135,6,0	1/1:16,4:22:12.04:328,12,0	1/1:39,0:39:45.63:1026,46,0	1/1:21,2:25:24.97:620,25,0	1/1:13,0:13:9.03:247,9,0
chr10	102341534	.	T	TGG	1807.96	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=8.559;DP=575;FS=5.766;HRun=8;HaplotypeScore=96.8898;InbreedingCoeff=0.9862;MQ=74.24;MQ0=2;MQRankSum=-4.673;QD=19.23;ReadPosRankSum=-5.434;VQSLOD=1.0505;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,123,1347	0/0:11,0:11:27.03:0,27,288	0/0:19,0:18:44.90:0,45,446	0/0:20,0:19:32.69:0,33,352	0/0:29,0:29:81.16:0,81,887	0/0:25,0:25:75.20:0,75,836	0/0:23,0:23:63.15:0,63,691	1/1:6,10:17:29.50:382,30,0	0/0:25,0:25:72.16:0,72,792	0/0:17,0:17:48.12:0,48,528	0/0:24,0:24:63.16:0,63,694	0/0:33,0:33:90.19:0,90,984	0/0:15,0:15:42.06:0,42,454	0/0:22,0:22:60.14:0,60,658	0/0:27,0:27:63.13:0,63,702	0/0:34,0:34:90.23:0,90,1003	0/0:31,0:31:75.14:0,75,818	1/1:2,0:9:17.47:60,17,0	1/1:4,5:10:26.50:316,27,0	1/1:8,11:20:35.36:433,35,0	1/1:7,8:15:20.79:278,21,0	0/0:18,0:18:48.11:0,48,535	0/0:18,0:18:48.11:0,48,535	0/0:20,0:20:48.13:0,48,535	0/0:23,0:23:51.08:0,51,557	1/1:5,1:10:20.44:176,20,0	1/1:5,4:10:23.52:274,24,0	1/1:2,0:3:9.01:95,9,0
chr10	102341567	.	G	GTT	5488.40	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-5.552;DP=591;FS=13.869;HRun=1;HaplotypeScore=90.8600;InbreedingCoeff=0.9981;MQ=62.63;MQ0=3;MQRankSum=-3.556;QD=48.57;ReadPosRankSum=-3.752;VQSLOD=2.9069;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,151,2295	0/0:11,0:11:33.08:0,33,480	0/0:29,0:23:63.19:0,63,942	0/0:24,0:24:63.21:0,63,951	0/0:28,0:28:84.24:0,84,1222	0/0:22,0:22:66.22:0,66,1010	0/0:27,0:27:75.22:0,75,1103	1/1:7,14:22:66.21:1224,66,0	0/0:26,0:26:78.25:0,78,1172	0/0:25,0:25:75.25:0,75,1148	0/0:24,0:24:69.23:0,69,1054	0/0:27,0:27:81.26:0,81,1219	0/0:15,0:15:45.15:0,45,686	0/0:18,0:18:51.17:0,51,780	0/0:21,0:21:60.20:0,60,919	0/0:31,0:31:84.28:0,84,1284	0/0:20,0:20:57.19:0,57,873	0/0:11,0:11:33.08:0,33,478	1/1:5,6:11:30.10:579,30,0	1/1:0,18:18:54.06:930,54,0	1/1:1,14:15:30.53:543,31,0	0/0:15,0:15:39.13:0,39,597	0/0:22,0:22:62.99:0,63,920	0/0:10,0:10:27.03:0,27,364	0/0:22,0:22:60.18:0,60,896	1/1:3,17:21:60.17:1055,60,0	1/1:1,14:17:42.14:811,42,0	1/1:0,7:6:18.06:348,18,0
chr10	102341942	.	TGTC	T	20663.86	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=13.180;DP=716;FS=0.294;HRun=0;HaplotypeScore=112.5523;InbreedingCoeff=0.9996;MQ=89.48;MQ0=0;MQRankSum=-5.172;QD=43.50;ReadPosRankSum=1.608;VQSLOD=6.0629;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,50:50:99:2299,138,0	0/0:14,0:14:42.14:0,42,951	0/0:32,0:32:84.29:0,84,1814	0/0:29,0:29:80.49:0,80,1680	0/0:33,0:33:99:0,99,2241	1/1:1,37:38:99:1699,102,0	1/1:0,19:19:57.19:949,57,0	1/1:3,30:33:90.25:1394,90,0	1/1:0,24:24:69.24:1147,69,0	0/0:23,0:23:66.23:0,66,1495	0/0:33,0:33:93.28:0,93,2044	0/0:30,0:30:90.31:0,90,1984	0/0:24,0:24:63.22:0,63,1412	1/1:2,16:18:32.89:549,33,0	1/1:0,20:20:60.21:998,60,0	0/0:23,0:23:66.23:0,66,1462	1/1:1,22:23:60.21:1000,60,0	1/1:0,14:14:39.13:650,39,0	1/1:2,22:24:66.22:1068,66,0	1/1:2,22:24:66.23:1095,66,0	1/1:0,19:19:51.13:818,51,0	1/1:1,28:29:75.26:1247,75,0	1/1:1,21:22:53.95:899,54,0	1/1:1,25:26:51.16:850,51,0	1/1:0,33:33:78.27:1296,78,0	1/1:0,27:27:78.20:1208,78,0	1/1:0,24:24:66.23:1099,66,0	1/1:0,8:8:24.08:400,24,0
chr10	102342365	.	C	CA	14079.43	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=8.777;DP=678;FS=3.325;HRun=4;HaplotypeScore=97.3824;InbreedingCoeff=0.9997;MQ=83.80;MQ0=0;MQRankSum=-1.927;QD=36.29;ReadPosRankSum=-1.051;VQSLOD=4.0432;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.25:0,93,1045	0/0:13,0:13:36.10:0,36,408	0/0:23,0:22:54.14:0,54,604	0/0:17,0:17:41.89:0,42,438	0/0:29,0:29:84.23:0,84,946	1/1:0,31:31:90.30:1231,90,0	1/1:3,19:22:51.14:678,51,0	1/1:3,23:26:69.22:928,69,0	1/1:2,23:25:69.23:943,69,0	0/0:34,0:34:99:0,99,1117	0/0:16,0:16:39.10:0,39,434	0/0:18,0:18:54.15:0,54,612	0/0:22,0:22:63.18:0,63,712	1/1:2,26:28:75.25:1026,75,0	1/1:2,27:29:78.26:1067,78,0	0/0:30,0:30:90.26:0,90,1021	1/1:1,21:22:63.21:860,63,0	0/0:9,0:9:24.07:0,24,272	1/1:3,23:26:69.22:929,69,0	1/1:1,26:27:78.26:1065,78,0	1/1:2,18:20:48.16:657,48,0	1/1:1,25:26:69.19:923,69,0	1/1:0,20:20:50.66:697,51,0	1/1:1,22:23:60.20:820,60,0	1/1:1,20:21:57.19:779,57,0	0/0:34,0:34:96.27:0,96,1089	1/1:0,42:42:99:1477,108,0	0/0:13,0:13:39.11:0,39,442
chr10	102343992	.	TGGG	T	3873.68	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=1.102;DP=574;FS=31.996;HRun=12;HaplotypeScore=96.2829;InbreedingCoeff=0.9369;MQ=75.08;MQ0=2;MQRankSum=-0.599;QD=23.48;ReadPosRankSum=7.776;VQSLOD=-0.1964;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:34:47.26:224,47,0	0/0:7,0:7:12.04:0,12,203	0/0:25,0:23:41.47:0,41,686	0/0:14,0:14:18.95:0,19,294	0/0:10,0:13:15.46:0,15,206	0/0:17,0:24:28.03:0,28,469	0/0:15,0:18:15.05:0,15,267	1/1:7,24:32:72.06:863,72,0	0/0:13,0:20:16.61:0,17,270	0/0:7,0:11:16.20:0,16,134	0/0:17,0:18:15.05:0,15,288	0/0:22,0:22:45.60:0,46,802	0/0:15,0:17:27.07:0,27,432	0/0:13,0:20:14.41:0,14,213	0/0:17,0:22:11.99:0,12,147	0/0:21,0:23:36.08:0,36,575	0/0:14,0:20:19.60:0,20,302	0/0:4,0:17:37.11:0,37,280	1/1:9,22:31:66.16:833,66,0	1/1:2,23:25:63.15:779,63,0	1/1:3,19:22:48:606,48,0	0/0:22,0:22:22.43:0,22,365	0/0:14,0:16:21.07:0,21,352	0/0:23,0:23:12.04:0,12,209	0/0:21,0:21:15.05:0,15,250	0/0:15,0:15:6.02:0,6,82	1/1:5,16:21:45.12:568,45,0	0/0:19,0:19:45.15:0,45,621
chr10	102343993	.	G	GT	541.52	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.074;DP=512;FS=14.916;HRun=2;HaplotypeScore=104.6887;InbreedingCoeff=0.8944;MQ=74.34;MQ0=2;MQRankSum=0.513;QD=19.34;ReadPosRankSum=0.697;VQSLOD=2.5047;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:76.58:0,77,558	0/0:7,0:7:14.63:0,15,159	0/0:26,0:22:18.61:0,19,200	0/0:13,0:13:28.96:0,29,261	0/0:12,0:12:14.44:0,14,147	0/0:20,0:20:32.05:0,32,297	0/0:17,0:17:27.01:0,27,249	0/0:30,0:30:88.70:0,89,647	0/0:17,0:17:14.13:0,14,165	0/0:12,0:12:26.75:0,27,198	0/0:14,0:14:30:0,30,311	0/0:25,0:25:35.35:0,35,370	0/0:18,0:18:23.80:0,24,241	0/0:15,0:15:11.05:0,11,95	0/0:12,0:12:8.84:0,9,67	0/0:18,0:18:38.90:0,39,404	0/0:17,0:17:23.08:0,23,190	0/0:17,0:17:41.58:0,42,289	0/0:29,0:29:79.88:0,80,578	0/0:25,0:25:68.33:0,68,499	0/0:22,0:22:53.69:0,54,395	0/0:16,0:16:36.19:0,36,297	0/0:13,0:13:17.09:0,17,142	0/0:19,0:19:12.41:0,12,101	0/0:16,0:16:24.83:0,25,223	1/1:2,6:8:15.87:140,16,0	0/0:21,0:21:53.71:0,54,398	1/1:7,13:20:41.91:520,42,0
chr10	102345603	.	CCCTA	C	934.96	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=-1.446;DP=168;FS=0.000;HRun=0;HaplotypeScore=29.4594;InbreedingCoeff=0.7934;MQ=92.41;MQ0=1;MQRankSum=-2.935;QD=32.24;ReadPosRankSum=-3.115;VQSLOD=2.3635;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:15.05:0,15,240	0/0:2,0:2:6.02:0,6,101	0/0:15,0:13:36.02:0,36,603	0/0:16,0:10:17.45:0,17,357	0/0:8,0:8:24.08:0,24,398	0/0:4,0:4:9.03:0,9,150	0/0:5,0:5:15.04:0,15,227	1/1:9,0:8:24.08:421,24,0	0/0:3,0:3:9.02:0,9,125	0/0:13,0:13:39.13:0,39,744	0/0:7,0:7:21.06:0,21,318	0/0:2,0:2:6.02:0,6,100	0/0:4,0:4:11.51:0,12,130	0/0:2,0:2:6.02:0,6,95	0/0:6,0:6:18.06:0,18,298	0/0:6,0:6:18.06:0,18,297	0/0:11,0:10:15.07:0,15,261	0/0:4,0:4:9.91:0,10,127	1/1:3,0:3:9.02:122,9,0	./.	1/1:3,0:3:9.03:145,9,0	0/0:5,0:5:15.05:0,15,250	0/0:3,0:3:6.02:0,6,100	0/0:4,0:4:12.03:0,12,175	0/0:4,0:4:9.01:0,9,126	1/1:4,0:4:9.02:131,9,0	1/1:4,0:4:8.99:94,9,0	1/1:6,0:6:12.04:191,12,0
chr10	102345736	.	G	GTA	92.03	PASS	AB=1.000;AC=9;AF=0.188;AN=48;BaseQRankSum=2.293;DP=194;FS=4.448;HRun=0;HaplotypeScore=43.1742;InbreedingCoeff=0.4056;MQ=100.70;MQ0=4;MQRankSum=-2.995;QD=1.10;ReadPosRankSum=-0.939;VQSLOD=0.5209;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:2,0:2:6.02:0,6,82	0/0:33,0:12:11.08:0,11,93	0/1:59,0:33:12.43:12,0,182	0/0:10,0:10:27.08:0,27,353	0/0:2,0:2:5.95:0,6,42	./.	1/1:11,0:11:6:53,6,0	0/0:1,0:1:2.98:0,3,21	0/0:8,0:8:21.07:0,21,289	0/0:8,0:8:24.07:0,24,312	0/0:1,0:1:3.01:0,3,41	0/0:4,0:4:12.04:0,12,163	0/0:1,0:1:2.98:0,3,21	0/0:2,0:2:2.94:0,3,21	0/0:7,0:7:18.05:0,18,230	0/0:13,0:12:26.77:0,27,204	1/1:1,5:6:3.01:49,3,0	1/1:3,0:4:5.99:50,6,0	./.	./.	0/0:2,0:2:5.94:0,6,40	0/0:2,0:2:5.95:0,6,42	0/0:1,0:1:2.98:0,3,22	0/0:1,0:1:2.97:0,3,20	0/0:6,0:6:10.98:0,11,49	1/1:0,0:2:6:53,6,0	0/0:2,0:2:5.49:0,5,24
chr10	102345738	.	ATATG	A	360.10	PASS	AB=1.000;AC=12;AF=0.240;AN=50;BaseQRankSum=2.610;DP=197;FS=6.625;HRun=0;HaplotypeScore=47.0040;InbreedingCoeff=0.3582;MQ=103.71;MQ0=4;MQRankSum=-1.355;QD=10.91;ReadPosRankSum=-1.934;VQSLOD=1.2709;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:2,0:2:6.02:0,6,162	0/0:29,0:13:9.22:0,9,125	0/0:60,0:35:10.66:0,11,334	0/0:11,0:11:30.10:0,30,746	0/0:2,0:2:6.02:0,6,102	1/1:1,0:1:0.47:1,0,0	0/1:12,0:11:68.47:69,0,68	0/0:1,0:1:3.01:0,3,51	0/0:8,0:8:21.07:0,21,567	0/0:9,0:9:27.09:0,27,644	0/0:1,0:1:3.01:0,3,81	0/0:5,0:5:15.05:0,15,326	0/0:1,0:1:3.01:0,3,51	0/0:2,0:2:2.97:0,3,51	0/0:7,0:7:18.06:0,18,451	0/0:14,0:13:26.90:0,27,442	1/1:6,0:6:2.60:10,3,0	0/1:4,0:4:19.15:19,0,26	./.	./.	0/0:2,0:2:5.99:0,6,50	0/0:3,0:3:5.97:0,6,48	0/0:1,0:1:3.01:0,3,43	0/0:1,0:1:3:0,3,25	1/1:0,6:6:15.05:266,15,0	1/1:2,0:2:4.07:13,4,0	1/1:0,2:2:6.02:114,6,0
chr10	102346776	.	GA	G	1315.35	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.186;DP=505;FS=0.505;HRun=9;HaplotypeScore=53.0330;InbreedingCoeff=0.8463;MQ=75.02;MQ0=0;MQRankSum=0.348;QD=20.24;ReadPosRankSum=0.398;VQSLOD=3.9570;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.19:0,63,727	0/0:11,0:10:30.09:0,30,346	0/0:13,0:13:1.14:0,1,104	0/0:10,0:10:11.73:0,12,135	0/0:19,0:19:50.93:0,51,558	0/0:28,1:29:49:0,49,806	0/0:12,0:12:30.09:0,30,346	0/0:33,0:35:84.20:0,84,947	0/0:13,0:13:39.12:0,39,450	0/0:21,0:21:54.16:0,54,617	0/0:15,0:15:45.13:0,45,519	0/0:19,1:20:29.70:0,30,596	0/0:12,0:12:36.09:0,36,403	0/0:18,0:18:42.12:0,42,485	0/0:21,0:22:56.96:0,57,608	0/0:18,0:18:51.15:0,51,589	0/0:16,0:16:36.11:0,36,415	1/1:5,15:20:7.40:322,7,0	0/0:19,1:20:23.48:0,23,482	0/0:21,0:22:63.02:0,63,707	0/0:10,1:11:5.71:0,6,319	0/0:8,0:9:23.90:0,24,257	0/0:13,0:13:36.11:0,36,415	0/0:14,0:14:36.09:0,36,399	0/0:26,0:26:72.19:0,72,811	1/1:3,20:23:38.54:524,39,0	0/0:16,1:17:17.63:0,18,442	1/1:0,22:22:66.04:604,66,0
chr10	102347020	.	CTG	C	1005.81	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.079;DP=512;FS=4.876;HRun=0;HaplotypeScore=65.8365;InbreedingCoeff=0.9677;MQ=88.63;MQ0=0;MQRankSum=-2.350;QD=33.53;ReadPosRankSum=-0.103;VQSLOD=5.6746;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.30:0,87,1553	0/0:11,0:11:33.11:0,33,592	0/0:16,0:16:48.16:0,48,853	0/0:20,0:20:41:0,41,782	0/0:27,0:27:69.24:0,69,1234	0/0:27,0:26:78.27:0,78,1405	0/0:15,0:15:45.15:0,45,810	0/0:37,0:37:96.33:0,96,1709	0/0:11,0:11:33.11:0,33,594	0/0:22,0:22:63.22:0,63,1121	0/0:21,0:21:60.21:0,60,1067	0/0:13,0:13:39.13:0,39,701	0/0:12,0:12:33.11:0,33,594	0/0:14,0:14:42.14:0,42,756	0/0:18,0:18:48.16:0,48,856	0/0:20,0:20:60.17:0,60,995	0/0:29,0:29:84.29:0,84,1512	0/0:15,0:15:45.15:0,45,810	0/0:13,0:13:39.13:0,39,681	0/0:22,0:22:66.21:0,66,1160	0/0:10,0:10:30.06:0,30,506	0/0:9,0:9:27.09:0,27,482	0/0:15,0:15:42.12:0,42,725	0/0:13,0:13:39.13:0,39,702	0/0:22,0:22:66.23:0,66,1188	1/1:2,20:22:9.16:785,9,0	0/0:19,0:19:57.20:0,57,1026	1/1:1,7:8:24.08:334,24,0
chr10	102348071	.	C	CTCCTTGGCA	3787.48	PASS	AB=0.578;AC=3;AF=0.054;AN=56;BaseQRankSum=0.072;DP=656;FS=1.550;HRun=0;HaplotypeScore=185.6623;InbreedingCoeff=0.6378;MQ=87.16;MQ0=0;MQRankSum=-8.354;QD=114.77;ReadPosRankSum=0.334;VQSLOD=4.1267;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.27:0,96,2714	0/0:14,0:14:39.09:0,39,1068	0/0:20,0:20:52.91:0,53,1371	0/0:27,0:27:70.47:0,70,1889	0/0:21,0:21:60.19:0,60,1708	0/0:22,0:22:57.20:0,57,1769	0/0:33,0:33:93.30:0,93,2724	0/0:35,0:34:99:0,99,2923	0/0:17,0:17:51.18:0,51,1580	0/0:29,0:29:84.29:0,84,2477	0/0:8,0:8:15.05:0,15,463	0/0:25,0:25:75.26:0,75,2312	0/0:23,0:23:66.23:0,66,2046	0/0:33,0:33:96.32:0,96,2863	0/0:20,0:20:60.18:0,60,1686	0/0:27,0:27:78.27:0,78,2391	0/0:34,0:34:99:0,102,3003	0/0:24,0:24:72.23:0,72,2063	0/0:16,0:16:45.15:0,45,1310	0/0:15,0:15:44.93:0,45,1222	0/0:34,0:34:99:0,99,3005	0/0:21,0:21:54.17:0,54,1446	0/0:11,0:11:33.11:0,33,1019	0/0:35,0:35:99:0,105,3095	0/0:21,0:21:63.20:0,63,1815	0/1:7,18:26:26.88:2808,0,27	0/0:24,0:24:72.25:0,72,2177	1/1:2,5:7:21.07:980,21,0
chr10	102348119	.	C	CA	715	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.870;DP=683;FS=0.000;HRun=1;HaplotypeScore=72.9204;InbreedingCoeff=0.9988;MQ=89.76;MQ0=0;MQRankSum=-4.728;QD=37.63;ReadPosRankSum=2.039;VQSLOD=4.1983;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,1391	0/0:11,0:11:33.11:0,33,428	0/0:34,0:34:93.25:0,93,1120	0/0:18,0:18:54.14:0,54,649	0/0:21,0:21:57.15:0,57,709	0/0:23,0:23:65.85:0,66,795	0/0:39,0:39:99:0,117,1519	0/0:28,0:28:81.26:0,81,1051	0/0:17,0:17:48.16:0,48,623	0/0:23,0:23:60.19:0,60,779	0/0:12,0:12:30.10:0,30,389	0/0:26,0:26:75.20:0,75,926	0/0:24,0:24:69.22:0,69,895	0/0:28,0:28:84.26:0,84,1076	0/0:24,0:24:72.23:0,72,935	0/0:31,0:31:90.25:0,90,1149	0/0:42,0:42:99:0,120,1558	0/0:22,0:22:66.19:0,66,840	0/0:18,0:18:48.10:0,48,591	0/0:25,0:25:75.21:0,75,944	0/0:32,0:32:84.25:0,84,1074	0/0:19,0:19:48.11:0,48,579	0/0:20,0:20:60.18:0,60,763	0/0:38,0:38:99:0,114,1453	0/0:23,0:23:69.21:0,69,880	1/1:2,8:10:30.09:432,30,0	0/0:26,0:26:78.14:0,78,960	1/1:0,9:9:27.09:404,27,0
chr10	102349131	.	ATT	A	20411.49	PASS	AB=0.529;AC=37;AF=0.661;AN=56;BaseQRankSum=17.180;DP=744;FS=2.131;HRun=4;HaplotypeScore=134.0551;InbreedingCoeff=0.9203;MQ=77.95;MQ0=2;MQRankSum=-6.120;QD=38.22;ReadPosRankSum=3.882;VQSLOD=3.9516;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:42:99:1766,120,0	0/0:16,0:16:45.15:0,45,835	0/0:18,0:18:44.74:0,45,733	0/0:20,0:19:55.07:0,55,954	0/0:21,0:21:57.20:0,57,1059	1/1:2,17:19:45.15:663,45,0	1/1:1,35:36:99:1501,102,0	1/1:1,23:24:66.21:950,66,0	1/1:1,32:33:90.30:1325,90,0	0/0:25,0:25:75.26:0,75,1405	0/0:23,0:23:69.24:0,69,1292	0/0:26,0:26:72.25:0,72,1342	0/0:24,0:24:72.25:0,72,1341	1/1:2,40:42:99:1766,120,0	1/1:1,38:39:99:1546,105,0	0/0:37,0:37:99:0,108,1955	1/1:3,43:45:99:1634,111,0	1/1:1,28:29:69.23:1016,69,0	1/1:2,17:19:51.17:744,51,0	1/1:0,20:20:60.20:883,60,0	1/1:3,38:41:99:1457,99,0	1/1:1,16:17:48.16:707,48,0	1/1:1,20:21:57.19:838,57,0	1/1:3,32:34:59.57:883,60,0	1/1:0,16:16:45.15:662,45,0	0/1:3,24:27:34.23:921,0,34	1/1:2,14:16:42.14:618,42,0	1/1:0,12:12:36.12:530,36,0
chr10	102349588	.	C	CTT	5799.77	PASS	AB=0.769;AC=24;AF=0.429;AN=56;BaseQRankSum=-7.721;DP=553;FS=3.171;HRun=10;HaplotypeScore=70.2831;InbreedingCoeff=0.8501;MQ=73.70;MQ0=2;MQRankSum=-0.403;QD=24.79;ReadPosRankSum=1.148;VQSLOD=4.7890;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:84.07:0,84,847	0/0:5,0:5:15.03:0,15,152	0/0:17,0:14:35.80:0,36,331	0/1:16,0:16:22.03:22,0,159	0/0:24,0:24:59.11:0,59,578	1/1:2,18:20:42.10:590,42,0	1/1:10,15:25:39.13:581,39,0	0/0:29,0:29:72.11:0,72,723	1/1:2,11:15:38.61:530,39,0	0/0:22,0:22:56.95:0,57,560	0/0:24,0:25:69.10:0,69,690	0/0:20,0:20:51.06:0,51,503	0/0:18,0:19:56.84:0,57,552	1/1:4,10:14:24.08:357,24,0	1/1:4,14:19:41.69:567,42,0	0/0:15,0:15:45.10:0,45,458	1/1:2,21:23:57.19:849,57,0	0/0:10,0:10:27.04:0,27,267	0/0:32,0:32:63.03:0,63,630	0/0:26,0:28:71.58:0,72,688	0/0:11,0:11:24.05:0,24,244	1/1:0,8:9:20.98:264,21,0	1/1:1,19:22:50.65:708,51,0	1/1:4,19:24:51.17:744,51,0	1/1:3,16:19:31.62:452,32,0	1/1:3,0:13:18.67:87,19,0	0/0:27,0:27:63.09:0,63,641	0/1:4,0:13:37.55:48,0,38
chr10	102349953	.	TG	T	408.79	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.975;DP=671;FS=3.948;HRun=1;HaplotypeScore=61.7337;InbreedingCoeff=0.9995;MQ=82.10;MQ0=0;MQRankSum=-0.523;QD=34.07;ReadPosRankSum=0.844;VQSLOD=3.4763;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,2230	0/0:13,0:13:36.12:0,36,575	0/0:15,0:15:42.13:0,42,645	0/0:23,0:23:38.88:0,39,893	0/0:30,0:30:90.31:0,90,1434	0/0:19,0:19:57.19:0,57,906	0/0:28,0:28:84.29:0,84,1335	0/0:29,0:29:84.27:0,84,1301	0/0:23,0:23:69.24:0,69,1100	0/0:22,0:22:63.21:0,63,1006	0/0:27,0:27:81.26:0,81,1264	0/0:13,0:13:36.12:0,36,576	0/0:21,0:21:63.21:0,63,1005	0/0:24,0:24:72.25:0,72,1148	0/0:22,0:22:66.23:0,66,1052	0/0:23,0:23:69.24:0,69,1103	0/0:30,0:30:87.27:0,87,1365	1/1:0,12:12:36.12:504,36,0	0/0:22,0:22:66.23:0,66,1052	0/0:24,0:24:72.25:0,72,1151	0/0:32,0:32:96.33:0,96,1535	0/0:30,0:30:90.31:0,90,1439	0/0:17,0:17:51.17:0,51,815	0/0:25,0:25:75.19:0,75,1103	0/0:24,0:24:72.25:0,72,1151	0/0:31,0:31:93.32:0,93,1485	0/0:23,0:23:69.24:0,69,1096	0/0:21,0:20:63.20:0,63,982
chr10	102350813	.	AGAGAGG	A	4139.77	PASS	AB=0.944;AC=25;AF=0.446;AN=56;BaseQRankSum=9.739;DP=582;FS=8.041;HRun=0;HaplotypeScore=118.5457;InbreedingCoeff=0.8218;MQ=60.65;MQ0=8;MQRankSum=-11.112;QD=20.00;ReadPosRankSum=0.745;VQSLOD=2.8886;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,17:25:15.39:498,15,0	0/0:5,0:5:15.05:0,15,500	0/0:56,0:23:21.98:0,22,434	0/0:81,0:30:28.08:0,28,853	0/0:19,0:19:33.11:0,33,1004	1/1:5,8:13:21.07:430,21,0	1/1:7,14:21:15.05:320,15,0	0/0:18,0:18:27.09:0,27,798	1/1:4,19:23:39.13:831,39,0	0/0:17,0:17:45.15:0,45,1488	0/0:10,0:10:24.07:0,24,720	0/1:16,1:17:23.30:23,0,1149	0/0:13,0:13:33.11:0,33,1081	1/1:2,14:16:18.03:383,18,0	1/1:7,18:25:33.11:703,33,0	0/0:22,0:22:63.22:0,63,2088	1/1:3,5:8:3.01:64,3,0	1/1:4,1:5:2.32:62,2,0	0/0:17,0:17:30.10:0,30,863	0/0:15,0:15:36.12:0,36,1188	0/0:41,0:41:82.15:0,82,2482	1/1:1,8:9:6.02:128,6,0	1/1:4,11:14:12.01:252,12,0	1/1:3,10:13:3.01:64,3,0	1/1:2,15:15:18.06:383,18,0	0/0:16,0:16:36.12:0,36,1200	0/0:21,0:19:48.16:0,48,1516	0/0:20,0:20:45.15:0,45,1499
chr10	102351868	.	CA	C	2276.76	PASS	AB=0.714;AC=35;AF=0.625;AN=56;BaseQRankSum=6.115;DP=628;FS=8.035;HRun=15;HaplotypeScore=89.1981;InbreedingCoeff=0.5710;MQ=73.37;MQ0=4;MQRankSum=0.529;QD=5.19;ReadPosRankSum=5.604;VQSLOD=2.2029;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:38:48.79:141,49,0	0/1:10,1:12:0.09:0,0,104	0/0:28,1:19:17.12:0,17,108	0/0:16,1:12:4.76:0,5,123	0/0:26,3:30:17.95:0,18,362	1/1:4,12:18:7:164,7,0	1/1:8,11:21:24.67:146,25,0	1/1:10,1:25:29.03:95,29,0	1/1:8,9:16:11.56:77,12,0	0/0:19,1:22:16.39:0,16,242	0/0:28,1:29:32.88:0,33,369	0/0:15,0:16:16.93:0,17,149	0/0:18,3:21:32.84:0,33,262	0/1:12,5:18:5.92:66,0,6	0/1:10,12:23:15.21:128,0,15	0/0:24,1:25:21.53:0,22,290	1/1:10,20:32:1.58:247,2,0	0/1:7,17:26:12.60:227,0,13	1/1:7,1:16:19.22:66,19,0	1/1:7,1:35:47.32:148,47,0	1/1:0,1:10:17.19:60,17,0	1/1:8,9:19:10.80:171,11,0	1/1:9,17:29:24.98:274,25,0	0/1:14,12:28:13.12:148,0,13	1/1:7,12:20:4.28:139,4,0	1/1:3,0:21:27.40:79,27,0	1/1:7,1:22:24.33:82,24,0	1/1:1,0:4:6.10:18,6,0
chr10	102352652	.	GACCTGCACAAAAGGCAGA	G	14082.41	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=14.525;DP=606;FS=3.244;HRun=0;HaplotypeScore=271.2187;InbreedingCoeff=0.9600;MQ=72.12;MQ0=0;MQRankSum=-14.587;QD=53.34;ReadPosRankSum=3.926;VQSLOD=3.7621;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,17:29:30.10:1487,30,0	0/0:12,0:12:33.09:0,33,2423	0/0:19,0:19:39.09:0,39,1619	0/0:21,0:20:47.90:0,48,2579	0/0:22,0:22:57.18:0,57,4257	1/1:5,19:24:48.16:2323,48,0	1/1:8,13:21:18.06:892,18,0	0/0:27,0:27:48.16:0,48,3482	1/1:4,12:16:24.08:1190,24,0	0/0:21,0:21:57.19:0,57,4179	0/0:24,0:24:57.20:0,57,4525	0/0:27,0:27:78.26:0,78,5694	0/0:28,0:28:69.24:0,69,5442	1/1:5,15:20:30.10:1486,30,0	1/1:7,18:25:39.13:1860,39,0	0/0:13,0:13:33.11:0,33,2743	1/1:7,14:21:12.04:595,12,0	1/1:6,4:10:3.01:149,3,0	0/0:19,0:19:36.12:0,36,2509	0/0:23,0:23:54.17:0,54,4271	0/0:27,0:27:66.23:0,66,5216	1/1:3,21:24:39.13:1658,39,0	1/1:6,17:23:24.08:1024,24,0	1/1:15,15:29:8.61:285,9,0	1/1:9,12:21:24.08:1134,24,0	0/0:22,0:22:57.19:0,57,4554	0/0:24,0:23:66.23:0,66,5272	0/0:13,0:13:30.10:0,30,2375
chr10	102352832	.	CAA	C	4673.63	PASS	AB=0.747;AC=24;AF=0.429;AN=56;BaseQRankSum=-1.537;DP=616;FS=5.406;HRun=14;HaplotypeScore=91.0800;InbreedingCoeff=0.8113;MQ=72.85;MQ0=11;MQRankSum=-3.030;QD=17.31;ReadPosRankSum=3.465;VQSLOD=4.3602;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,1:34:43.85:0,44,661	0/0:11,0:14:7.92:0,8,370	0/0:46,0:16:15.14:0,15,226	0/0:38,0:17:0.69:0,1,173	0/0:23,0:27:68.15:0,68,832	1/1:2,17:21:44.64:447,45,0	1/1:4,18:25:32.58:446,33,0	0/0:4,1:20:8.28:0,8,101	1/1:3,14:18:41.77:372,42,0	0/0:14,0:18:41.57:0,42,473	0/0:26,0:32:74.20:0,74,935	0/0:14,0:14:36.12:0,36,502	0/0:18,0:21:50.57:0,51,586	1/1:1,15:16:38.79:345,39,0	1/1:0,11:13:32.52:274,33,0	0/0:9,0:10:23.57:0,24,302	1/1:3,24:29:20.76:530,21,0	1/1:1,8:9:14.55:185,15,0	0/0:7,0:20:23.20:0,23,273	0/1:7,1:26:9.88:10,0,106	0/0:3,0:11:25.97:0,26,135	1/1:2,21:22:57.03:526,57,0	1/1:9,28:40:78.96:683,79,0	1/1:0,11:12:32.78:289,33,0	1/1:4,21:26:62.71:567,63,0	0/0:14,0:17:32.06:0,32,366	0/0:6,0:20:2.55:0,3,72	0/1:10,1:11:0.37:0,0,288
chr10	102353453	.	T	TAA	5701.09	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-6.977;DP=664;FS=0.000;HRun=11;HaplotypeScore=81.1731;InbreedingCoeff=0.9952;MQ=78.27;MQ0=0;MQRankSum=-1.436;QD=21.19;ReadPosRankSum=2.684;VQSLOD=4.2926;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:23:39.93:137,40,0	0/0:5,0:6:17.77:0,18,157	0/0:29,0:31:24.74:0,25,381	0/0:13,0:13:17.71:0,18,144	0/0:27,0:31:65.19:0,65,638	1/1:2,34:38:84.25:1188,84,0	1/1:6,18:25:50.66:704,51,0	0/0:36,0:39:68.31:0,68,671	1/1:3,21:26:56.63:762,57,0	0/0:37,0:37:80.99:0,81,777	0/0:27,0:28:47.84:0,48,609	0/0:25,0:25:69.10:0,69,668	0/0:29,0:31:71.79:0,72,668	1/1:4,14:19:24.08:348,24,0	1/1:6,19:26:36.11:496,36,0	0/0:28,0:28:69.03:0,69,656	1/1:6,18:24:42.14:608,42,0	1/1:6,0:16:17.47:60,17,0	0/0:17,0:17:47.99:0,48,447	0/0:30,0:32:86.71:0,87,798	0/0:16,0:16:36.02:0,36,349	1/1:6,13:21:34.82:309,35,0	1/1:3,12:19:33.05:411,33,0	1/1:2,14:16:24.08:348,24,0	1/1:1,12:16:28.56:330,29,0	0/0:25,0:25:66.04:0,66,627	0/0:22,0:23:44.94:0,45,474	0/0:12,0:12:32.69:0,33,288
chr10	102354083	.	G	GCACACACACACACACA	12679.63	PASS	AB=0.868;AC=33;AF=0.589;AN=56;BaseQRankSum=1.835;DP=763;FS=0.899;HRun=0;HaplotypeScore=314.7113;InbreedingCoeff=0.6990;MQ=58.62;MQ0=11;MQRankSum=-8.800;QD=24.86;ReadPosRankSum=-5.299;VQSLOD=1.8640;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:38:37.13:123,0,37	0/0:6,0:6:18.06:0,18,688	0/1:50,0:29:8.27:8,0,242	0/0:42,0:29:5.67:0,6,485	0/0:22,0:25:12.51:0,13,1955	1/1:8,0:20:9.03:467,9,0	1/1:10,10:22:5.24:224,5,0	1/1:51,0:45:57.20:1540,57,0	1/1:19,2:21:15.05:484,15,0	0/0:27,0:29:57.19:0,57,2201	0/0:21,0:23:51.17:0,51,1998	0/0:21,0:21:51.17:0,51,1789	0/0:30,0:31:72.21:0,72,2456	1/1:26,3:26:27.09:1298,27,0	1/1:41,3:45:39.13:1863,39,0	0/0:21,0:26:69.13:0,69,2508	0/1:9,14:24:80.02:745,0,80	1/1:10,0:12:27.09:802,27,0	1/1:20,0:18:27.09:647,27,0	1/1:26,0:30:30.10:817,30,0	1/1:22,0:20:2.86:48,3,0	1/1:19,2:20:15.05:669,15,0	1/1:14,3:17:14.35:592,14,0	1/1:11,0:33:11.70:676,12,0	1/1:23,0:23:8.69:226,9,0	0/0:25,0:30:60.20:0,60,2202	1/1:14,0:22:45.15:1451,45,0	0/0:17,0:19:45.15:0,45,1953
chr10	102354105	.	AGCCTT	A	2036.69	PASS	AB=0.794;AC=13;AF=0.232;AN=56;BaseQRankSum=3.677;DP=717;FS=17.480;HRun=0;HaplotypeScore=196.6953;InbreedingCoeff=-0.3016;MQ=52.21;MQ0=10;MQRankSum=-0.966;QD=6.23;ReadPosRankSum=-2.797;VQSLOD=1.0900;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,6:30:85.19:85,0,550	0/0:8,0:8:21.07:0,21,695	0/0:50,0:29:86.78:0,87,2452	0/0:39,0:27:72.05:0,72,1940	0/0:24,0:24:69.24:0,69,2190	0/0:10,0:10:27.09:0,27,674	0/1:15,2:17:11.72:12,0,758	0/1:23,14:31:99:655,0,1535	0/1:14,4:20:25.77:26,0,489	0/0:28,0:29:84.23:0,84,2703	0/0:22,0:22:66.23:0,66,2141	0/0:22,1:23:62.64:0,63,1946	0/0:32,0:32:95.52:0,96,2827	0/1:20,5:27:99:176,0,490	0/1:26,13:42:99:107,0,850	0/0:29,0:29:84.18:0,84,2593	0/0:11,0:12:15.92:0,16,380	0/1:15,0:16:99:113,0,632	0/1:10,1:14:99:152,0,860	0/1:23,6:30:99:179,0,771	0/0:19,1:21:26.63:0,27,556	0/1:12,1:16:99:142,0,354	0/1:15,1:22:99:159,0,236	0/0:31,0:31:23.74:0,24,431	0/1:13,7:22:81.35:81,0,313	0/0:31,0:31:90.31:0,90,2805	0/1:19,2:23:99:304,0,737	0/0:23,0:23:69.24:0,69,2241
chr10	102354164	.	T	TCACACA	9728.63	PASS	AB=0.556;AC=23;AF=0.411;AN=56;BaseQRankSum=-3.554;DP=744;FS=6.401;HRun=0;HaplotypeScore=199.1481;InbreedingCoeff=0.8794;MQ=58.72;MQ0=7;MQRankSum=-9.685;QD=31.28;ReadPosRankSum=-1.378;VQSLOD=3.8874;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:44:76.73:77,0,111	0/0:11,0:11:21.07:0,21,441	0/0:30,0:21:19.04:0,19,532	0/0:33,0:27:26.63:0,27,373	0/0:25,0:26:66.17:0,66,1238	1/1:8,6:16:23.88:729,24,0	1/1:24,8:32:29.98:747,30,0	0/0:18,0:42:19.07:0,19,434	1/1:5,14:23:30.02:919,30,0	0/0:30,0:30:65.43:0,65,1213	0/0:20,0:20:48.10:0,48,930	0/0:27,0:30:68.78:0,69,1223	0/0:26,0:27:63.15:0,63,1225	1/1:5,15:21:27.09:886,27,0	1/1:7,25:36:60.14:1802,60,0	0/0:24,0:24:63.19:0,63,1244	1/1:15,4:19:26.22:560,26,0	1/1:1,0:30:54.15:679,54,0	0/0:12,0:28:7.05:0,7,164	0/0:1,0:23:47.14:0,47,545	0/0:15,0:35:1.25:0,1,63	1/1:4,11:19:27.09:890,27,0	1/1:0,16:19:23.95:729,24,0	1/1:21,7:28:26.63:724,27,0	1/1:4,12:19:30.10:987,30,0	0/0:31,0:31:75.07:0,75,1528	0/0:3,0:21:44.63:0,45,584	0/0:17,0:17:39.12:0,39,767
chr10	102355275	.	G	GGGGGGT	173.34	PASS	AB=1.000;AC=11;AF=0.212;AN=52;BaseQRankSum=0.289;DP=198;FS=21.282;HRun=0;HaplotypeScore=60.7714;InbreedingCoeff=0.1828;MQ=77.05;MQ0=1;MQRankSum=-1.622;QD=3.33;ReadPosRankSum=2.578;VQSLOD=-0.1207;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,6:13:4.82:163,5,0	0/1:2,0:2:0.10:0,0,9	0/0:28,0:21:16.78:0,17,347	0/0:12,0:8:6.62:0,7,156	0/0:8,0:8:6:0,6,51	0/0:2,0:2:0.89:0,1,2	0/1:5,0:5:1.43:1,0,40	0/0:4,0:4:3:0,3,26	0/1:3,0:3:16.87:47,0,17	0/0:10,0:10:17.61:0,18,129	0/0:4,0:4:6:0,6,54	0/0:16,0:16:24.88:0,25,235	0/0:9,0:9:9.73:0,10,68	1/1:4,0:4:2.87:20,3,0	0/0:1,0:1:0:0,0,0	0/0:11,0:11:30.01:0,30,263	0/1:6,0:6:9.42:9,0,36	0/1:8,0:8:19.03:19,0,32	0/0:3,0:3:0.06:0,0,1	0/0:1,0:1:0:0,0,0	0/0:5,0:5:0:0,0,0	0/0:4,0:4:2.72:0,3,27	./.	0/1:4,0:4:0.17:0,0,0	./.	0/0:10,0:10:20.89:0,21,248	0/1:7,0:7:25.75:28,0,26	0/0:15,0:15:27.03:0,27,309
chr10	102356256	.	CGTGT	C	810.01	PASS	AB=0.627;AC=3;AF=0.054;AN=56;BaseQRankSum=3.610;DP=623;FS=0.700;HRun=0;HaplotypeScore=151.2735;InbreedingCoeff=0.3696;MQ=48.16;MQ0=15;MQRankSum=-1.896;QD=20.77;ReadPosRankSum=0.329;VQSLOD=3.1150;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:8.07:0,8,116	0/0:8,0:8:21.06:0,21,425	0/0:13,0:3:3.01:0,3,46	0/0:9,0:7:6.02:0,6,124	0/0:15,0:14:38.98:0,39,843	0/0:18,0:19:17.85:0,18,167	0/0:27,0:25:13.77:0,14,276	0/0:19,0:19:36.02:0,36,531	0/0:23,0:23:29.18:0,29,244	0/0:31,0:30:71.37:0,71,1437	0/0:13,0:13:17.64:0,18,361	0/0:19,0:18:33.10:0,33,741	0/0:11,0:10:21.04:0,21,450	0/0:33,0:33:35.96:0,36,290	0/0:18,0:18:5.58:0,6,161	0/0:27,0:27:48.15:0,48,1147	0/0:27,0:30:31.66:0,32,227	0/0:19,0:18:36.08:0,36,765	0/0:26,0:23:22.71:0,23,597	0/0:13,0:12:24.02:0,24,420	0/0:62,0:62:52.17:0,52,1067	0/0:22,0:22:17.23:0,17,156	0/0:17,0:17:20.29:0,20,137	0/0:35,1:36:8.62:0,9,84	0/0:21,0:21:1.70:0,2,47	0/1:13,19:29:65.96:722,0,66	0/0:16,0:15:28.77:0,29,530	1/1:0,7:7:12.04:187,12,0
chr10	102356271	.	GTGCA	G	3131	PASS	AB=1.000;AC=32;AF=0.593;AN=54;BaseQRankSum=10.946;DP=612;FS=5.415;HRun=0;HaplotypeScore=144.6002;InbreedingCoeff=0.3146;MQ=46.24;MQ0=19;MQRankSum=-0.423;QD=6.79;ReadPosRankSum=1.245;VQSLOD=2.0989;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,1:30:11.96:182,12,0	0/0:9,0:9:9.78:0,10,185	./.	0/0:4,0:3:5.72:0,6,66	0/1:18,0:16:38.04:38,0,633	1/1:17,2:18:12.16:108,12,0	1/1:29,3:29:6.53:99,7,0	0/1:18,0:17:10.50:11,0,507	1/1:21,1:21:19.98:199,20,0	0/1:35,0:33:69.19:69,0,1383	0/0:11,0:11:17.77:0,18,293	0/0:22,0:21:33.04:0,33,576	0/1:12,0:11:39.58:40,0,217	1/1:31,2:31:11.21:434,11,0	1/1:19,2:20:15:146,15,0	0/0:25,0:24:51.01:0,51,850	1/1:32,4:36:50.68:668,51,0	0/0:16,0:15:12.26:0,12,398	0/1:20,0:18:89.03:89,0,380	0/1:10,0:10:16.48:16,0,187	0/0:63,0:60:30.32:0,30,594	1/1:19,3:22:17.85:204,18,0	1/1:14,3:17:23.47:205,23,0	1/1:37,1:36:32.92:430,33,0	1/1:21,0:21:5.26:82,5,0	0/1:29,0:26:70.06:163,0,70	0/1:19,0:16:39.07:39,0,310	1/1:8,0:8:12.69:99,13,0
chr10	102356273	.	GCA	G	3522.13	PASS	AB=0.975;AC=33;AF=0.611;AN=54;BaseQRankSum=10.305;DP=603;FS=3.172;HRun=0;HaplotypeScore=124.5063;InbreedingCoeff=0.2485;MQ=46.41;MQ0=20;MQRankSum=0.075;QD=7.51;ReadPosRankSum=1.144;VQSLOD=3.4475;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,9:27:11.75:182,12,0	0/0:8,0:8:9.77:0,10,173	./.	0/0:4,0:3:5.63:0,6,66	0/1:18,0:16:61.65:62,0,570	1/1:16,3:18:12.49:109,12,0	1/1:31,2:30:6.66:85,7,0	0/1:17,1:17:10.76:11,0,508	1/1:14,6:19:19.98:222,20,0	0/1:35,1:34:97.93:98,0,1180	0/0:10,0:10:17.94:0,18,296	0/0:17,6:22:33.03:0,33,502	0/1:13,0:11:46.22:46,0,199	1/1:26,7:31:11.23:461,11,0	1/1:14,5:18:14.96:171,15,0	0/0:24,1:24:50.95:0,51,768	1/1:27,9:36:51.23:673,51,0	0/1:17,0:16:49.79:50,0,369	0/1:19,1:18:96.03:96,0,393	0/1:8,1:9:15.57:16,0,214	0/0:62,1:60:30.32:0,30,575	1/1:16,3:19:18.04:204,18,0	1/1:11,6:17:24.04:252,24,0	1/1:30,8:35:32.92:433,33,0	1/1:1,18:19:5.27:91,5,0	0/1:29,0:26:49.26:165,0,49	0/1:20,0:17:6.63:7,0,320	1/1:8,0:8:12.68:91,13,0
chr10	102356274	.	CAT	C	762.06	PASS	AB=0.984;AC=21;AF=0.389;AN=54;BaseQRankSum=10.063;DP=609;FS=4.597;HRun=0;HaplotypeScore=134.5036;InbreedingCoeff=0.3410;MQ=46.21;MQ0=24;MQRankSum=2.414;QD=2.35;ReadPosRankSum=0.713;VQSLOD=2.4476;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:28:11.59:86,12,0	0/0:8,0:8:14.92:0,15,95	./.	0/0:4,0:3:5.76:0,6,34	0/1:18,0:16:22.76:23,0,331	0/0:20,0:18:1.57:0,2,34	0/1:33,0:30:5.05:5,0,55	0/0:19,0:17:27.75:0,28,298	0/1:20,0:19:12.60:41,0,13	0/0:33,4:35:2.74:0,3,911	0/0:10,0:10:17.88:0,18,217	0/0:22,0:21:27.70:0,28,324	0/1:13,0:11:8.69:9,0,110	1/1:33,0:31:12.08:125,12,0	1/1:20,0:18:5.26:53,5,0	0/0:25,0:24:50.48:0,50,473	1/1:36,0:36:24.52:221,25,0	0/0:17,0:16:10.88:0,11,190	0/1:21,0:19:23.35:23,0,186	0/0:9,0:9:0.38:0,0,89	0/0:63,0:60:40.82:0,41,298	1/1:19,0:19:12.58:61,13,0	1/1:17,0:17:14.12:72,14,0	1/1:38,0:35:25.65:164,26,0	0/1:19,0:19:13.66:40,0,14	0/0:30,0:26:28.16:0,28,249	0/0:20,0:17:15.50:0,15,187	0/1:7,0:8:19.41:19,0,28
chr10	102356275	.	ATGTGTGTG	A	889.49	PASS	AB=0.947;AC=18;AF=0.346;AN=52;BaseQRankSum=3.303;DP=615;FS=0.846;HRun=0;HaplotypeScore=173.7572;InbreedingCoeff=0.3491;MQ=46.20;MQ0=24;MQRankSum=-1.647;QD=3.23;ReadPosRankSum=-1.101;VQSLOD=2.6065;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:3:0,3,27	0/0:8,0:8:6.02:0,6,115	./.	./.	0/0:18,0:16:16.61:0,17,477	1/1:21,0:19:0.88:2,1,0	1/1:33,0:30:2.28:9,2,0	1/1:17,2:17:8.99:111,9,0	0/1:20,0:19:0.04:0,0,1	0/0:37,0:35:65.33:0,65,1878	0/0:10,0:10:5.82:0,6,213	0/0:22,0:21:18.06:0,18,591	0/0:14,0:12:20.08:0,20,187	0/0:32,0:30:3.73:0,4,23	0/0:20,0:18:0.25:0,0,9	0/0:25,0:24:18.05:0,18,516	1/1:36,0:36:7.73:135,8,0	0/0:19,0:18:11.71:0,12,125	1/1:20,0:19:9.96:250,10,0	1/1:7,1:9:9.01:166,9,0	0/0:36,27:61:2.71:0,3,65	0/0:18,0:19:0.89:0,1,3	0/0:16,0:17:8.31:0,8,55	0/1:39,0:36:0.89:46,0,1	0/1:19,0:19:4.83:22,0,5	0/1:29,0:26:58.61:59,0,268	0/1:12,8:18:7.22:195,0,7	0/1:8,0:8:11.51:44,0,12
chr10	102356291	.	G	GCA	198.17	PASS	AB=0.606;AC=1;AF=0.019;AN=52;BaseQRankSum=0.438;DP=593;FS=6.597;HRun=0;HaplotypeScore=134.7066;InbreedingCoeff=-0.0354;MQ=46.26;MQ0=29;MQRankSum=-2.560;QD=9.91;ReadPosRankSum=0.462;VQSLOD=3.0838;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:30:5.88:0,6,93	0/0:8,0:8:15.03:0,15,201	./.	./.	0/0:16,0:14:34.93:0,35,502	0/0:18,0:16:5.62:0,6,80	0/0:36,0:34:9.34:0,9,129	0/0:23,0:19:54.06:0,54,689	0/0:20,0:19:20.98:0,21,297	0/0:37,0:34:99:0,99,1420	0/0:10,0:10:18.06:0,18,261	0/0:24,0:23:36.12:0,36,537	0/0:12,0:10:22.56:0,23,321	0/0:27,0:25:23.79:0,24,345	0/0:23,0:21:11.83:0,12,179	0/0:23,0:22:41.96:0,42,622	0/0:37,0:37:59.76:0,60,742	0/1:7,11:20:99:272,0,135	0/0:14,0:12:33.07:0,33,413	0/0:9,0:9:21.04:0,21,259	0/0:58,0:55:26.18:0,26,386	0/0:22,0:22:14.55:0,15,228	0/0:19,0:18:23.66:0,24,351	0/0:40,0:37:20.55:0,21,322	0/0:16,0:16:11.98:0,12,177	0/0:25,0:22:53.96:0,54,718	0/0:16,0:13:26.96:0,27,288	0/0:7,0:7:21.07:0,21,279
chr10	102356314	.	TGCGCGC	T	643.99	PASS	AB=0.907;AC=19;AF=0.352;AN=54;BaseQRankSum=6.380;DP=534;FS=9.645;HRun=0;HaplotypeScore=122.8755;InbreedingCoeff=0.7165;MQ=51.67;MQ0=22;MQRankSum=-0.017;QD=2.34;ReadPosRankSum=0.048;VQSLOD=1.8599;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,16:29:0.11:1,0,0	0/0:5,0:5:3.01:0,3,102	./.	0/1:8,0:4:0.33:0,0,0	0/0:13,0:11:27.09:0,27,576	1/1:16,0:15:2.22:7,2,0	0/1:38,0:36:0.41:0,0,0	0/0:18,0:15:32.54:0,33,528	0/1:12,0:13:0:1,0,0	0/0:32,0:30:64.99:0,65,1384	0/0:8,0:8:11.71:0,12,301	0/0:21,0:20:24.05:0,24,577	0/0:12,0:10:18.06:0,18,396	0/1:23,0:21:0.07:1,0,0	1/1:17,0:18:3.01:51,3,0	0/0:14,0:13:18.06:0,18,399	1/1:35,0:36:30.60:379,31,0	0/0:21,0:21:36.12:0,36,801	0/0:12,0:10:19.19:0,19,247	0/0:9,0:9:17.65:0,18,313	0/0:54,0:53:44.48:0,44,873	1/1:15,0:16:9.48:85,9,0	1/1:14,0:15:13.48:87,13,0	1/1:38,0:38:2.98:23,3,0	1/1:15,0:17:20.57:170,21,0	0/0:14,0:13:28.60:0,29,528	0/0:17,0:14:18.50:0,19,356	0/0:7,0:7:15.30:0,15,336
chr10	102357431	.	GGTGTGTGTGTGT	G	1681.70	PASS	AB=0.808;AC=19;AF=0.365;AN=52;BaseQRankSum=5.572;DP=512;FS=33.051;HRun=0;HaplotypeScore=166.4030;InbreedingCoeff=0.5450;MQ=56.67;MQ0=15;MQRankSum=-5.869;QD=9.29;ReadPosRankSum=2.085;VQSLOD=1.4241;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,1:19:13.96:56,0,14	0/0:7,0:8:9.03:0,9,302	./.	./.	0/0:16,0:15:9.03:0,9,526	1/1:8,1:10:6.02:185,6,0	0/1:15,5:18:17.51:94,0,18	0/0:29,0:27:17.90:0,18,400	0/1:9,6:15:2.36:294,0,2	0/0:24,0:24:15.03:0,15,518	0/0:9,0:9:9.03:0,9,418	0/0:20,0:20:23.98:0,24,1009	0/0:13,0:14:21.54:0,22,1037	1/1:12,6:17:12.04:409,12,0	1/1:10,7:17:12.04:411,12,0	0/0:16,0:15:24.55:0,25,1144	1/1:7,4:11:3.01:103,3,0	0/0:18,0:21:32.99:0,33,406	0/0:19,0:19:16.57:0,17,697	0/0:16,0:16:3.01:0,3,117	0/0:51,0:55:68.87:0,69,3006	1/1:16,0:18:3.90:86,4,0	1/1:14,0:13:3:25,3,0	1/1:15,3:19:3.48:85,3,0	1/1:13,4:18:3.01:102,3,0	0/0:18,0:19:30.03:0,30,683	0/0:10,0:12:27.98:0,28,1365	0/0:9,0:10:6.99:0,7,218
chr10	102357614	.	AC	A	1859.30	PASS	AB=0.986;AC=49;AF=0.875;AN=56;BaseQRankSum=-2.141;DP=314;FS=0.842;HRun=3;HaplotypeScore=85.0017;InbreedingCoeff=-0.0120;MQ=81.63;MQ0=1;MQRankSum=-1.139;QD=5.92;ReadPosRankSum=1.199;VQSLOD=0.5247;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,1:9:0.31:40,0,0	1/1:5,0:5:3.26:10,3,0	0/1:28,0:17:4.13:4,0,136	0/1:10,0:10:12.87:13,0,38	1/1:9,0:9:9.13:41,9,0	0/1:5,0:5:3.79:15,0,4	1/1:7,0:7:4.98:19,5,0	1/1:30,2:30:56.96:376,57,0	1/1:7,2:9:1.27:71,1,0	1/1:23,1:25:45.69:266,46,0	1/1:7,0:7:8.88:42,9,0	1/1:13,2:15:14.77:131,15,0	0/1:16,0:18:25.38:27,0,25	0/1:7,0:6:2.47:15,0,2	1/1:9,0:8:7.31:39,7,0	1/1:14,1:15:21.03:123,21,0	1/1:2,1:3:4.80:27,5,0	1/1:8,0:8:15.79:76,16,0	1/1:14,0:13:2.37:40,2,0	1/1:11,1:12:21.93:160,22,0	1/1:13,0:13:19.14:143,19,0	1/1:12,0:12:9.84:81,10,0	1/1:7,0:7:2.43:9,2,0	1/1:7,0:7:7.13:38,7,0	0/1:5,0:5:3.70:4,0,9	1/1:18,0:18:20.12:137,20,0	1/1:3,0:3:2.97:20,3,0	1/1:1,0:1:2.37:8,2,0
chr10	102357615	.	C	CA	6945.22	PASS	AB=0.921;AC=54;AF=0.964;AN=56;BaseQRankSum=-4.777;DP=320;FS=1.076;HRun=16;HaplotypeScore=73.4901;InbreedingCoeff=-0.0831;MQ=80.84;MQ0=1;MQRankSum=-3.479;QD=21.70;ReadPosRankSum=0.640;VQSLOD=5.3308;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,5:10:14.98:181,15,0	1/1:1,3:4:6.02:95,6,0	0/1:26,2:17:91.49:91,0,213	0/1:9,1:10:46.77:65,0,47	1/1:3,6:9:18.06:260,18,0	1/1:0,5:5:11.97:156,12,0	1/1:1,7:7:11.91:146,12,0	1/1:25,4:27:60.19:846,60,0	1/1:5,4:9:14.98:165,15,0	1/1:16,8:24:63.11:872,63,0	1/1:0,7:7:15.05:200,15,0	1/1:7,5:12:29.67:387,30,0	1/1:8,8:15:18.05:310,18,0	1/1:1,7:7:14.98:195,15,0	1/1:7,4:9:9.01:102,9,0	1/1:10,4:14:30.10:439,30,0	1/1:3,1:4:6.02:91,6,0	1/1:5,3:8:19.60:245,20,0	1/1:12,2:13:1.81:206,2,0	1/1:9,3:12:27.08:362,27,0	1/1:14,1:15:26.76:291,27,0	1/1:2,12:14:27.02:347,27,0	1/1:0,5:7:5.35:54,5,0	1/1:6,4:10:9.91:116,10,0	1/1:1,5:6:8.96:98,9,0	1/1:16,5:21:41.19:539,41,0	1/1:4,0:4:3.01:44,3,0	1/1:1,0:1:3.01:42,3,0
chr10	102357662	.	T	TAC	2959.24	PASS	AB=0.848;AC=34;AF=0.630;AN=54;BaseQRankSum=1.311;DP=486;FS=4.088;HRun=0;HaplotypeScore=151.1051;InbreedingCoeff=0.4518;MQ=65.94;MQ0=8;MQRankSum=0.425;QD=8.48;ReadPosRankSum=0.368;VQSLOD=3.3901;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:14.77:165,15,0	0/1:3,0:5:2.17:2,0,70	0/0:28,0:19:8.96:0,9,75	0/1:20,0:18:8.03:8,0,42	0/0:12,0:16:38.21:0,38,330	0/1:7,3:9:27.77:38,0,28	1/1:21,6:25:26.87:382,27,0	1/1:29,0:23:19.35:127,19,0	0/1:8,13:22:16.79:336,0,17	0/0:26,0:30:36.95:0,37,372	0/0:8,0:8:15.04:0,15,169	0/0:18,0:16:27.04:0,27,279	0/0:17,0:17:23.58:0,24,261	1/1:3,2:5:5.88:91,6,0	1/1:5,12:16:6.02:92,6,0	0/0:17,0:16:24.03:0,24,247	0/1:8,7:17:26.85:184,0,27	0/1:10,0:17:14.82:15,0,87	1/1:7,0:7:5.97:59,6,0	1/1:8,0:8:3.97:15,4,0	1/1:43,0:43:33.19:289,33,0	1/1:10,5:15:12.04:183,12,0	1/1:7,1:8:3.01:46,3,0	1/1:14,14:29:33.06:463,33,0	1/1:2,4:6:9.03:137,9,0	1/1:18,3:24:19.83:445,20,0	1/1:9,0:8:8.97:71,9,0	./.
chr10	102357690	.	C	CAT	878.31	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=6.785;DP=716;FS=17.131;HRun=0;HaplotypeScore=161.7634;InbreedingCoeff=-0.0947;MQ=43.93;MQ0=24;MQRankSum=3.869;QD=3.06;ReadPosRankSum=5.871;VQSLOD=1.2200;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,14:28:14.96:279,15,0	0/0:9,0:8:19.81:0,20,194	0/0:38,0:12:29:0,29,306	0/0:39,0:17:42.32:0,42,382	0/0:22,0:21:56.94:0,57,625	0/1:14,0:13:7.24:7,0,82	0/1:35,0:33:99:114,0,208	0/0:55,0:43:97.51:0,98,745	0/1:24,0:24:39.83:157,0,40	0/0:37,0:36:83.93:0,84,919	0/0:10,0:10:24.03:0,24,301	0/0:20,0:18:35.93:0,36,466	0/0:22,0:21:41.75:0,42,466	0/1:15,0:14:31.07:31,0,36	0/1:23,0:22:30.97:32,0,31	0/0:24,0:21:36.04:0,36,456	0/1:24,0:22:82.72:83,0,132	0/0:24,0:24:57.90:0,58,403	0/0:19,0:13:10.92:0,11,175	0/0:15,0:14:26.65:0,27,199	0/0:78,0:72:57.85:0,58,649	0/1:23,0:23:60.33:60,0,90	0/1:13,0:13:4.18:4,0,106	0/1:41,0:39:56.90:157,0,57	0/1:12,0:12:45.49:45,0,57	0/1:35,0:32:63.73:64,0,271	0/0:12,0:11:17.61:0,18,114	0/0:5,0:5:14.96:0,15,119
chr10	102357693	.	ACT	A	102.61	PASS	AB=0.990;AC=14;AF=0.250;AN=56;BaseQRankSum=8.171;DP=738;FS=49.010;HRun=0;HaplotypeScore=159.3349;InbreedingCoeff=-0.1566;MQ=44.06;MQ0=23;MQRankSum=-0.331;QD=0.25;ReadPosRankSum=-0.883;VQSLOD=0.8851;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,2:30:5.40:30,5,0	0/1:9,0:8:2.60:3,0,171	0/1:41,0:14:9.08:9,0,229	0/1:40,0:18:10.01:10,0,243	0/0:22,0:21:18.49:0,18,593	0/1:15,0:14:6.09:6,0,113	0/1:34,0:32:12.05:12,0,437	0/1:56,0:44:12.78:13,0,610	0/1:21,1:22:25.81:26,0,201	0/0:36,0:35:25.78:0,26,849	0/0:10,0:10:26.92:0,27,378	0/0:20,0:18:36.77:0,37,482	0/0:22,0:21:26.85:0,27,534	0/0:17,0:16:10.99:0,11,111	0/0:23,0:22:11.75:0,12,97	0/0:26,0:23:36.02:0,36,498	0/0:27,0:25:7.29:0,7,285	0/1:24,0:24:23.58:24,0,198	0/0:20,0:13:28.91:0,29,261	0/1:18,0:18:33.34:33,0,207	0/1:77,0:71:48:48,0,726	0/0:23,0:23:20.85:0,21,189	0/0:14,0:14:20.99:0,21,185	0/0:41,1:40:44.82:0,45,458	0/0:13,0:13:21.01:0,21,204	0/1:39,0:36:17.10:17,0,624	0/1:12,1:13:21.64:22,0,116	0/0:5,0:5:14.99:0,15,126
chr10	102357766	.	TAC	T	4110.60	PASS	AB=1.000;AC=23;AF=0.426;AN=54;BaseQRankSum=8.867;DP=856;FS=4.194;HRun=0;HaplotypeScore=162.1192;InbreedingCoeff=0.8988;MQ=45.01;MQ0=38;MQRankSum=3.168;QD=12.42;ReadPosRankSum=1.303;VQSLOD=3.0263;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:35:30.44:391,30,0	0/0:9,0:8:21.06:0,21,331	./.	0/0:32,0:8:14.52:0,15,229	0/0:15,0:15:39.12:0,39,628	1/1:9,9:17:21.07:272,21,0	1/1:8,23:26:9:117,9,0	0/0:86,0:60:99:0,129,1813	1/1:11,23:31:53.97:700,54,0	0/0:34,0:32:84.70:0,85,1271	0/0:17,0:17:41.90:0,42,684	0/0:27,0:27:62.89:0,63,1027	0/0:36,0:36:69.72:0,70,1115	1/1:3,23:26:8.68:117,9,0	1/1:3,24:25:26.99:351,27,0	0/0:35,1:36:68.42:0,68,1164	1/1:9,30:35:48.29:655,48,0	0/0:31,0:31:46.26:0,46,998	0/1:29,0:21:16.82:17,0,430	0/0:29,0:28:41.62:0,42,704	0/0:67,1:63:74.58:0,75,1190	1/1:3,16:19:24.07:312,24,0	1/1:7,14:16:45.12:555,45,0	1/1:13,23:35:15.04:195,15,0	1/1:1,15:16:33.08:429,33,0	0/0:42,0:34:91.50:0,92,1445	0/0:20,0:20:14.40:0,14,479	0/0:23,0:22:57.19:0,57,959
chr10	102357828	.	T	TAC	2432.06	PASS	AB=0.950;AC=13;AF=0.232;AN=56;BaseQRankSum=-0.357;DP=848;FS=7.176;HRun=0;HaplotypeScore=222.0141;InbreedingCoeff=0.3317;MQ=40.26;MQ0=74;MQRankSum=-7.198;QD=7.82;ReadPosRankSum=-4.361;VQSLOD=1.6632;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:44:23.63:0,24,336	0/1:3,0:3:0:0,0,0	0/0:47,0:9:3.01:0,3,34	0/0:55,0:8:20.05:0,20,216	0/0:18,0:17:18.06:0,18,229	0/0:23,0:22:30.06:0,30,369	0/0:34,0:31:12.28:0,12,152	0/1:68,9:55:73.12:849,0,73	0/0:29,0:27:33.96:0,34,396	0/0:24,0:21:48.15:0,48,596	0/0:22,0:21:51.04:0,51,586	0/0:32,0:30:69.15:0,69,832	0/0:29,0:27:57.14:0,57,687	0/1:28,0:22:41.78:42,0,121	0/0:36,0:34:23.75:0,24,249	0/0:35,0:32:74.88:0,75,880	0/0:29,0:25:23.73:0,24,276	0/1:29,0:30:0.91:1,0,456	0/1:25,4:19:26.67:236,0,27	1/1:10,9:20:7.56:148,8,0	0/1:42,5:35:29.77:79,0,30	0/0:15,0:14:12:0,12,145	0/0:23,0:18:21.50:0,21,260	0/0:29,0:27:15.78:0,16,197	0/0:13,0:11:9.03:0,9,112	0/1:32,1:30:29.40:575,0,29	1/1:15,6:23:32.52:452,33,0	1/1:13,0:13:17.77:208,18,0
chr10	102357838	.	CAT	C	1294.35	PASS	AB=0.988;AC=19;AF=0.339;AN=56;BaseQRankSum=8.261;DP=798;FS=16.037;HRun=0;HaplotypeScore=217.5112;InbreedingCoeff=-0.1492;MQ=40.50;MQ0=60;MQRankSum=-2.379;QD=2.41;ReadPosRankSum=-0.216;VQSLOD=1.1313;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:45,0:45:9.57:79,0,10	0/0:4,0:4:2.97:0,3,20	0/0:30,0:4:3.01:0,3,37	0/0:39,0:7:20.74:0,21,236	0/0:15,0:14:20.93:0,21,384	0/1:27,0:26:14.77:113,0,15	0/1:35,0:31:19.04:19,0,41	0/1:80,0:61:99:228,0,397	0/1:29,0:27:0.15:117,0,0	0/0:23,0:21:59.30:0,59,932	0/0:21,0:19:51.08:0,51,880	0/0:31,0:29:53.51:0,54,1251	0/0:25,0:23:62.72:0,63,915	0/1:29,1:24:14.48:59,0,14	0/1:38,0:36:50.17:50,0,55	0/0:34,0:31:31.24:0,31,1153	0/1:27,0:23:64.91:83,0,65	0/1:28,0:27:38.84:39,0,659	0/1:23,0:18:15.47:15,0,254	0/0:17,0:17:7.70:0,8,52	0/1:48,1:37:47.10:47,0,54	0/1:14,0:13:13.72:28,0,14	1/1:22,0:17:18.78:87,19,0	0/1:27,0:26:6.09:61,0,6	0/1:13,1:12:15.72:16,0,18	0/1:29,2:25:74.89:301,0,75	0/0:23,0:23:7.17:0,7,109	1/1:16,0:16:21.02:119,21,0
chr10	102357840	.	TAC	T	2329.54	PASS	AB=0.942;AC=24;AF=0.444;AN=54;BaseQRankSum=7.793;DP=773;FS=0.920;HRun=0;HaplotypeScore=209.7168;InbreedingCoeff=0.5014;MQ=40.63;MQ0=52;MQRankSum=3.937;QD=4.96;ReadPosRankSum=-2.399;VQSLOD=2.6872;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:38,5:43:29.04:343,29,0	0/0:3,0:3:2.76:0,3,39	./.	0/0:35,0:7:14.45:0,14,115	0/0:15,0:14:20.93:0,21,337	1/1:23,2:25:2.72:355,3,0	1/1:27,7:30:14.55:102,15,0	0/1:74,2:58:47.56:48,0,586	1/1:21,5:24:34.47:377,34,0	0/0:23,0:21:54.17:0,54,821	0/0:20,0:18:45.15:0,45,715	0/0:31,0:29:71.91:0,72,1128	0/0:26,0:24:50.75:0,51,738	0/1:28,1:23:17.26:87,0,17	1/1:36,2:36:24.07:230,24,0	0/0:36,1:34:30.12:0,30,1043	0/1:21,4:21:14.90:166,0,15	0/0:28,0:27:14.69:0,15,543	0/0:23,0:19:33.77:0,34,357	0/0:16,0:16:7.04:0,7,109	0/1:46,1:36:3.11:3,0,64	1/1:14,2:15:12.46:135,12,0	1/1:17,4:16:21.07:261,21,0	0/1:24,3:26:7.64:176,0,8	1/1:14,0:12:9:97,9,0	0/1:30,1:25:41.61:42,0,127	0/0:20,0:20:21.79:0,22,243	1/1:18,0:18:19.73:105,20,0
chr10	102357850	.	C	CAT	944.59	PASS	AB=0.965;AC=17;AF=0.315;AN=54;BaseQRankSum=5.661;DP=757;FS=5.829;HRun=0;HaplotypeScore=216.2874;InbreedingCoeff=0.0044;MQ=41.69;MQ0=36;MQRankSum=3.305;QD=2.33;ReadPosRankSum=-1.038;VQSLOD=2.1700;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:45,0:45:18.60:160,0,19	0/0:3,0:3:2.68:0,3,45	./.	0/0:27,0:6:18.06:0,18,254	0/0:17,0:16:24.06:0,24,344	0/1:28,0:28:23.24:126,0,23	0/1:40,0:35:3.27:89,0,3	0/0:71,0:52:20.32:0,20,881	0/1:30,0:28:17.58:167,0,18	0/0:22,0:21:56.77:0,57,813	0/0:20,0:18:48.15:0,48,706	0/0:35,0:33:75.18:0,75,1195	0/0:22,0:20:54:0,54,786	0/1:27,1:23:41.84:86,0,42	0/1:34,0:33:23.20:50,0,23	0/0:40,0:37:82.93:0,83,1218	0/1:26,0:24:50.14:50,0,92	0/0:28,0:27:64.72:0,65,795	0/1:27,1:20:25.30:25,0,391	0/0:13,0:13:7.99:0,8,55	0/1:44,1:35:33.49:33,0,76	1/1:16,0:15:4.74:61,5,0	1/1:19,0:17:19.79:92,20,0	0/1:29,0:29:35.31:55,0,35	1/1:13,0:12:4.04:24,4,0	0/0:27,0:22:48.82:0,49,371	0/1:12,5:21:89.44:89,0,96	0/0:13,0:13:15.09:0,15,77
chr10	102357852	.	CAT	C	3123.71	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=7.594;DP=749;FS=2.210;HRun=0;HaplotypeScore=193.3678;InbreedingCoeff=0.4405;MQ=41.81;MQ0=35;MQRankSum=-0.412;QD=5.49;ReadPosRankSum=-3.788;VQSLOD=2.2961;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,4:41:31.34:355,31,0	0/0:3,0:3:2.98:0,3,53	1/1:13,0:1:2.88:15,3,0	0/1:27,0:7:3.22:3,0,28	0/0:17,0:16:23.87:0,24,304	1/1:24,4:28:27.44:300,27,0	1/1:38,3:36:20.10:187,20,0	0/1:67,0:48:99:192,0,298	1/1:25,3:26:17.63:242,18,0	0/0:22,0:21:56.73:0,57,690	0/0:20,0:18:38.30:0,38,571	0/0:35,0:33:63.46:0,63,1021	0/0:22,0:19:52.46:0,52,586	1/1:24,4:22:17.84:188,18,0	1/1:24,8:31:34.94:325,35,0	0/0:40,0:37:8.43:0,8,924	1/1:24,2:23:4.66:174,5,0	0/1:29,0:28:99:146,0,226	0/1:28,0:20:66.91:67,0,162	0/1:15,0:15:13.81:14,0,37	0/1:47,0:37:26.09:50,0,26	1/1:14,2:15:13.88:110,14,0	1/1:18,2:18:19.60:102,20,0	1/1:26,4:29:6.96:204,7,0	1/1:11,3:13:11.55:89,12,0	1/1:23,3:22:0.73:292,1,0	0/0:21,0:21:8.43:0,8,101	1/1:4,9:13:26.85:259,27,0
chr10	102357854	.	TAC	T	449.51	PASS	AB=0.993;AC=22;AF=0.393;AN=56;BaseQRankSum=5.786;DP=746;FS=3.199;HRun=0;HaplotypeScore=200.6054;InbreedingCoeff=0.1898;MQ=41.87;MQ0=33;MQRankSum=0.015;QD=1.12;ReadPosRankSum=0.113;VQSLOD=2.6331;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:41:18.60:86,0,19	0/0:3,0:3:2.76:0,3,46	0/0:12,0:2:5.56:0,6,30	0/0:25,0:8:3.01:0,3,44	0/0:16,3:18:14.65:0,15,194	1/1:28,0:28:7.76:50,8,0	1/1:40,0:35:5.03:49,5,0	0/0:68,0:49:15.51:0,16,104	0/1:26,0:24:29.57:30,0,34	0/0:21,0:20:32.99:0,33,405	0/1:19,0:17:10.17:10,0,267	0/0:34,1:33:22.88:0,23,716	0/0:23,0:20:23.57:0,24,340	1/1:30,0:24:1.51:23,2,0	0/1:33,0:32:11.89:67,0,12	0/0:39,1:37:26.15:0,26,741	0/1:26,0:23:23.96:24,0,24	0/1:30,0:29:16.56:17,0,47	0/0:28,0:20:9.81:0,10,81	0/1:13,1:14:0.01:1,0,0	0/0:48,0:38:5.30:0,5,45	0/1:15,0:14:4.81:15,0,5	0/1:20,0:18:0:1,0,0	1/1:27,0:27:11.89:83,12,0	1/1:14,0:13:2.97:21,3,0	0/1:25,0:21:27.66:37,0,28	0/0:21,0:21:7.25:0,7,53	1/1:12,0:13:18.19:101,18,0
chr10	102357866	.	C	CAT	918.38	PASS	AB=0.986;AC=8;AF=0.143;AN=56;BaseQRankSum=3.112;DP=736;FS=1.147;HRun=0;HaplotypeScore=181.8198;InbreedingCoeff=0.1350;MQ=43.22;MQ0=28;MQRankSum=-1.880;QD=4.50;ReadPosRankSum=1.982;VQSLOD=2.7818;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:13.35:0,13,276	0/0:8,0:8:17.65:0,18,156	0/0:21,0:10:16.91:0,17,185	0/0:21,0:9:26.85:0,27,263	0/0:25,0:23:35.99:0,36,386	0/0:26,0:26:37.01:0,37,245	0/1:38,0:35:6.88:7,0,110	0/1:63,0:48:8.83:9,0,629	0/0:30,0:29:52.19:0,52,396	0/0:26,0:25:68.83:0,69,730	0/0:18,0:16:42.01:0,42,467	0/0:35,0:34:90.07:0,90,1081	0/0:21,0:18:44.86:0,45,522	0/0:34,0:28:19.80:0,20,221	0/0:26,0:25:11.98:0,12,207	0/0:38,0:35:90.64:0,91,1071	0/0:30,0:27:50.31:0,50,323	0/1:28,0:27:99:180,0,221	0/1:20,0:14:7.05:7,0,111	0/0:11,0:10:7.51:0,8,43	0/0:46,0:40:22.71:0,23,209	0/0:16,0:15:13.71:0,14,107	0/0:20,0:18:9.62:0,10,47	0/0:29,0:28:31.97:0,32,254	0/0:14,0:13:8.75:0,9,69	0/1:19,2:17:11.24:356,0,11	0/1:21,0:21:20.97:21,0,109	1/1:10,3:13:27.09:474,27,0
chr10	102357983	.	TTTC	T	7521.56	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=12.914;DP=535;FS=21.973;HRun=0;HaplotypeScore=79.0290;InbreedingCoeff=0.9735;MQ=91.66;MQ0=0;MQRankSum=-4.224;QD=37.24;ReadPosRankSum=3.765;VQSLOD=3.5964;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:69.23:1127,69,0	0/0:6,0:6:18.06:0,18,402	0/0:25,0:25:72.25:0,72,1561	0/0:26,0:26:61.45:0,61,1268	0/0:28,0:28:81.28:0,81,1799	1/1:0,20:20:51.17:821,51,0	1/1:2,19:21:54.18:882,54,0	0/0:21,0:21:57.20:0,57,1247	1/1:1,19:20:45.15:735,45,0	0/0:19,0:19:48.14:0,48,1018	0/0:13,0:13:30.10:0,30,670	0/0:22,0:21:60.18:0,60,1248	0/0:17,0:17:48.15:0,48,1029	1/1:1,18:18:42.14:686,42,0	1/1:0,14:14:36.12:576,36,0	0/0:17,0:17:51.18:0,51,1129	1/1:1,15:16:30.10:490,30,0	0/0:17,0:17:48.12:0,48,1007	0/0:21,0:21:60.20:0,60,1286	0/0:16,0:16:45.15:0,45,1003	0/0:37,0:37:99:0,102,2225	1/1:0,10:10:24.08:379,24,0	1/1:1,19:20:48.16:759,48,0	1/1:1,16:16:29.89:489,30,0	1/1:2,13:15:36.12:576,36,0	0/0:27,0:27:72.25:0,72,1608	0/0:20,0:20:60.21:0,60,1319	0/0:1,0:1:3.01:0,3,67
chr10	102358537	.	AAGGGAAGG	A	9918.58	PASS	AB=0.773;AC=20;AF=0.357;AN=56;BaseQRankSum=7.320;DP=639;FS=1.977;HRun=0;HaplotypeScore=276.3632;InbreedingCoeff=0.8541;MQ=47.11;MQ0=9;MQRankSum=-12.434;QD=38.44;ReadPosRankSum=-0.288;VQSLOD=3.9306;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:23:18.02:389,18,0	0/0:7,0:7:21.07:0,21,820	0/0:35,0:18:37.11:0,37,867	0/0:34,0:10:23.56:0,24,400	0/0:21,0:21:63.20:0,63,2526	1/1:10,11:21:53.64:1116,54,0	0/1:10,6:15:6.58:431,0,7	0/0:22,0:20:57.12:0,57,1007	1/1:15,9:23:30.74:887,31,0	0/0:25,0:25:75.24:0,75,2781	0/0:21,0:21:63.12:0,63,1938	0/0:21,0:20:57.14:0,57,1614	0/0:29,0:29:84.16:0,84,2583	1/1:14,9:22:30.50:976,31,0	1/1:17,12:28:46.70:1234,47,0	0/0:22,0:22:66.16:0,66,2151	0/1:14,4:18:14.18:717,0,14	0/0:22,0:22:60.22:0,60,1837	0/0:16,0:16:48.05:0,48,931	0/0:28,0:28:65.69:0,66,1423	0/0:9,0:9:11.24:0,11,324	1/1:15,14:27:52.84:1252,53,0	1/1:14,11:24:38.58:838,39,0	1/1:12,6:18:23.81:670,24,0	1/1:17,15:31:62.88:1409,63,0	0/0:25,0:25:75.15:0,75,2855	0/0:26,0:26:66.13:0,66,1428	0/0:18,0:18:44.95:0,45,1548
chr10	102358566	.	GAGAA	G	3942.84	PASS	AB=0.950;AC=27;AF=0.519;AN=52;BaseQRankSum=7.823;DP=578;FS=27.051;HRun=0;HaplotypeScore=182.9593;InbreedingCoeff=0.5181;MQ=48.81;MQ0=8;MQRankSum=-3.071;QD=11.30;ReadPosRankSum=-0.309;VQSLOD=1.3241;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:0.43:0,0,376	0/0:6,0:6:12.02:0,12,182	./.	./.	0/0:29,0:29:54.15:0,54,1123	1/1:19,0:19:13.12:220,13,0	0/1:16,0:17:15.90:146,0,16	0/1:36,0:31:9.52:10,0,12	1/1:19,0:20:33.09:385,33,0	0/0:27,0:27:48.14:0,48,1085	0/0:9,0:17:31.99:0,32,435	0/0:10,1:10:12.03:0,12,196	0/0:13,0:24:15.05:0,15,262	1/1:14,0:14:8.94:101,9,0	1/1:21,0:21:8.02:239,8,0	0/0:23,0:23:36.11:0,36,784	0/1:16,0:16:16.95:108,0,17	0/0:27,0:27:44.08:0,44,630	1/1:12,0:13:9.16:90,9,0	0/1:19,0:25:14.80:303,0,15	0/0:15,0:16:2.15:0,2,24	1/1:22,0:22:30.78:379,31,0	1/1:15,0:14:15.82:195,16,0	0/1:26,0:26:41.97:102,0,42	1/1:27,0:26:36.87:452,37,0	1/1:17,11:28:18.07:477,18,0	1/1:24,0:27:16.52:269,17,0	1/1:7,16:23:30.10:469,30,0
chr10	102358602	.	AAGAAAGAC	A	4831.04	PASS	AB=0.962;AC=23;AF=0.411;AN=56;BaseQRankSum=4.663;DP=621;FS=6.322;HRun=0;HaplotypeScore=182.4673;InbreedingCoeff=0.2085;MQ=61.10;MQ0=5;MQRankSum=-3.717;QD=12.20;ReadPosRankSum=-2.450;VQSLOD=3.1478;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:34:99:188,0,350	0/0:8,0:8:23.70:0,24,483	0/0:18,0:15:11.75:0,12,257	0/0:7,0:7:18.01:0,18,179	0/0:30,0:30:90.13:0,90,2420	0/1:18,0:18:47.37:95,0,47	0/1:22,0:22:29.93:30,0,88	1/1:23,10:31:57.65:922,58,0	0/1:23,0:23:11:104,0,11	0/0:30,0:30:84.57:0,85,2406	0/0:20,0:20:57.09:0,57,1187	0/0:12,0:11:33.02:0,33,590	0/0:23,0:23:48.04:0,48,896	1/1:15,0:15:11.41:236,11,0	0/1:19,0:19:45.55:77,0,46	0/0:23,0:23:63.11:0,63,1754	0/1:18,0:18:36.84:37,0,41	0/1:24,0:24:74.70:75,0,725	1/1:5,12:15:38.56:487,39,0	1/1:11,18:28:27.49:829,27,0	0/1:6,15:21:27.09:71,0,27	0/1:25,0:25:0.85:360,0,1	1/1:15,0:14:7.92:242,8,0	0/1:30,0:30:22.63:262,0,23	0/1:29,0:28:46.44:130,0,46	0/0:23,0:23:66.04:0,66,708	1/1:6,17:23:16.59:686,17,0	0/0:31,0:30:68.94:0,69,694
chr10	102358606	.	AAGAC	A	8252.44	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=9.069;DP=615;FS=10.367;HRun=0;HaplotypeScore=129.5631;InbreedingCoeff=0.6313;MQ=61.59;MQ0=4;MQRankSum=-4.040;QD=18.63;ReadPosRankSum=1.385;VQSLOD=4.0880;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:34:99:301,0,160	0/0:8,0:8:20.69:0,21,291	0/0:18,0:15:11.75:0,12,257	0/0:7,0:7:18.01:0,18,179	0/0:31,0:31:81.53:0,82,1466	1/1:2,16:18:24.06:421,24,0	1/1:4,17:21:18.02:307,18,0	1/1:31,0:31:82.34:736,82,0	1/1:1,23:24:33.11:606,33,0	0/0:30,0:30:84.08:0,84,1509	0/0:20,0:20:56.97:0,57,723	0/0:12,0:11:30.01:0,30,409	0/0:22,0:22:47.84:0,48,560	1/1:13,3:16:44.93:488,45,0	1/1:2,19:21:24.08:443,24,0	0/0:24,0:24:69.06:0,69,1146	1/1:3,12:15:1.73:209,2,0	0/1:24,0:24:99:156,0,257	1/1:16,0:14:38.88:381,39,0	1/1:26,0:26:63.70:706,64,0	1/1:19,0:19:0.54:30,1,0	1/1:1,24:25:71.67:883,72,0	1/1:12,3:14:39.07:520,39,0	1/1:30,2:32:57.39:552,57,0	1/1:2,26:27:42.14:779,42,0	0/1:23,0:23:99:151,0,225	1/1:23,0:23:30.10:410,30,0	0/1:31,0:30:99:173,0,245
chr10	102359227	.	GA	G	3808.22	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.894;DP=529;FS=5.255;HRun=7;HaplotypeScore=49.1991;InbreedingCoeff=0.9730;MQ=68.97;MQ0=0;MQRankSum=0.369;QD=25.73;ReadPosRankSum=-0.214;VQSLOD=4.0373;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:88.49:0,88,1070	0/0:11,0:11:30.10:0,30,378	0/0:7,0:7:9.03:0,9,110	0/0:11,0:10:26.99:0,27,308	0/0:30,0:30:87.28:0,87,1092	0/0:21,0:21:63.20:0,63,793	0/0:13,0:13:33.10:0,33,403	1/1:4,27:31:81.16:818,81,0	0/0:11,0:11:30.08:0,30,364	0/0:18,0:18:51.15:0,51,622	0/0:22,0:22:57.16:0,57,692	0/0:17,0:17:48.14:0,48,589	0/0:15,0:15:39.12:0,39,490	0/0:18,0:18:54.17:0,54,678	0/0:24,0:24:66.21:0,66,830	0/0:22,0:22:66.20:0,66,817	0/0:23,0:23:69.12:0,69,818	1/1:4,19:23:57.13:582,57,0	1/1:0,20:20:60.13:606,60,0	1/1:3,27:30:75.16:762,75,0	1/1:0,13:13:33.08:337,33,0	0/0:8,0:8:15.05:0,15,189	0/0:13,0:13:39.11:0,39,473	0/0:4,0:4:9.02:0,9,101	0/0:22,0:22:63.20:0,63,793	0/0:23,0:23:66.21:0,66,830	1/1:5,26:31:69.15:703,69,0	0/0:15,0:15:45.14:0,45,565
chr10	102360607	.	C	CATAT	19863.90	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=7.561;DP=661;FS=2.855;HRun=0;HaplotypeScore=143.5773;InbreedingCoeff=0.9561;MQ=76.57;MQ0=0;MQRankSum=-6.039;QD=45.88;ReadPosRankSum=0.520;VQSLOD=5.4568;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:53,0:53:98.84:2191,99,0	0/0:12,0:12:33.09:0,33,541	0/0:19,0:19:10.35:0,10,421	0/0:21,0:21:0.17:0,0,194	0/0:22,0:22:63.22:0,63,1093	1/1:24,0:24:63.22:1308,63,0	1/1:22,0:22:36.12:786,36,0	1/1:10,19:31:72.14:1463,72,0	1/1:23,0:23:51.18:1035,51,0	0/0:30,0:31:87.30:0,87,1522	0/0:17,0:17:48.12:0,48,780	0/0:22,0:22:60.17:0,60,991	0/0:26,0:26:66.21:0,66,1129	1/1:22,0:22:51.18:1038,51,0	1/1:42,0:42:99:1993,99,0	0/0:24,0:23:63.18:0,63,1042	1/1:23,0:23:54.19:1100,54,0	1/1:4,0:16:30.98:153,31,0	1/1:14,11:25:51.17:1197,51,0	1/1:6,14:23:44.94:1081,45,0	1/1:1,13:15:33.09:843,33,0	1/1:25,0:25:54.19:1124,54,0	1/1:20,0:21:57.20:1217,57,0	1/1:18,0:18:36.12:735,36,0	1/1:20,0:20:45.15:919,45,0	0/0:24,0:24:69.21:0,69,1151	1/1:5,24:30:66.23:1679,66,0	0/0:9,0:9:24.08:0,24,421
chr10	102360616	.	A	ATATG	21831.71	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=11.873;DP=669;FS=0.636;HRun=0;HaplotypeScore=126.8969;InbreedingCoeff=0.5791;MQ=70.25;MQ0=0;MQRankSum=-6.625;QD=48.95;ReadPosRankSum=5.211;VQSLOD=5.4798;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,50:52:99:3044,114,0	0/0:11,0:11:33.11:0,33,644	0/0:18,0:17:18.22:0,18,558	0/0:15,0:15:24.54:0,25,357	0/0:23,0:23:63.22:0,63,1254	1/1:0,23:23:63.22:1756,63,0	1/1:3,16:22:39.13:1037,39,0	0/1:29,0:29:99:741,0,171	1/1:2,21:24:51.18:1422,51,0	0/0:35,0:35:99:0,102,1869	0/0:17,0:17:48.15:0,48,901	0/0:20,0:20:60.21:0,60,1170	0/0:25,0:25:75.20:0,75,1353	1/1:2,20:23:51.18:1421,51,0	1/1:3,38:42:99:2763,99,0	0/0:23,0:22:69.19:0,69,1254	1/1:1,25:27:54.19:1506,54,0	0/1:16,0:16:20.09:53,0,20	0/1:22,0:22:99:509,0,123	0/1:24,0:24:67.11:636,0,67	0/1:16,0:16:8.77:531,0,9	1/1:2,24:27:54.19:1504,54,0	1/1:2,20:22:57.20:1580,57,0	1/1:4,17:23:36.12:1003,36,0	1/1:2,16:19:45.15:1252,45,0	0/0:24,0:24:72.24:0,72,1385	0/1:35,0:35:99:1073,0,145	0/0:12,0:12:36.06:0,36,574
chr10	102361869	.	C	CG	5332.36	PASS	AB=0.720;AC=21;AF=0.375;AN=56;BaseQRankSum=16.185;DP=518;FS=13.722;HRun=0;HaplotypeScore=107.6407;InbreedingCoeff=0.8145;MQ=52.77;MQ0=24;MQRankSum=-8.892;QD=25.39;ReadPosRankSum=-0.743;VQSLOD=4.3097;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:54.12:724,54,0	0/0:11,0:11:33.11:0,33,461	0/1:17,0:9:6.26:6,0,148	0/0:14,0:2:2.94:0,3,28	0/0:26,0:26:69.23:0,69,959	1/1:6,11:15:39.10:482,39,0	1/1:2,12:11:27.09:368,27,0	0/0:22,0:21:60.20:0,60,834	0/1:6,12:16:2.91:396,0,3	0/0:29,0:29:81.27:0,81,1130	0/0:16,0:16:42.13:0,42,568	0/0:13,0:12:33.11:0,33,457	0/0:22,0:22:63.19:0,63,858	1/1:4,10:13:32.44:380,32,0	1/1:4,16:20:51.04:624,51,0	0/0:21,0:21:57.19:0,57,796	0/1:3,11:13:2.74:436,0,3	0/0:24,0:23:60.19:0,60,820	0/0:16,0:14:42.14:0,42,586	0/0:23,0:23:60.20:0,60,838	0/0:10,0:10:30.10:0,30,419	1/1:3,17:19:32.31:402,32,0	1/1:2,13:14:24:278,24,0	1/1:3,11:13:29.93:354,30,0	1/1:5,20:24:66.17:883,66,0	0/0:22,0:20:60.20:0,60,839	0/0:28,0:26:72.19:0,72,938	0/0:11,0:10:30.08:0,30,397
chr10	102361893	.	ACAC	A	8085	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=10.523;DP=566;FS=1.584;HRun=0;HaplotypeScore=111.7255;InbreedingCoeff=0.9940;MQ=60.10;MQ0=9;MQRankSum=-14.615;QD=42.11;ReadPosRankSum=1.228;VQSLOD=6.3535;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:69.24:1282,69,0	0/0:15,0:15:45.15:0,45,1032	0/0:42,0:24:42.55:0,43,842	0/0:33,0:11:26.47:0,26,318	0/0:27,0:27:72.25:0,72,1583	1/1:1,13:14:30.10:558,30,0	1/1:0,14:13:35.91:624,36,0	0/0:21,0:21:18.06:0,18,535	1/1:0,18:19:39.13:697,39,0	0/0:29,0:29:84.28:0,84,1873	0/0:19,0:19:57.20:0,57,1264	0/0:14,0:14:42.14:0,42,964	0/0:20,0:20:57.18:0,57,1246	1/1:0,10:12:24.08:389,24,0	1/1:0,22:22:54.19:1004,54,0	0/0:18,0:18:54.19:0,54,1172	1/1:0,10:10:30.10:555,30,0	0/0:22,0:22:54.04:0,54,643	0/0:21,0:21:15.53:0,16,392	0/0:18,0:18:51.03:0,51,648	0/0:9,0:9:23.97:0,24,276	1/1:0,21:21:48.08:821,48,0	1/1:0,20:20:45.15:837,45,0	1/1:0,16:16:39.12:705,39,0	1/1:1,18:18:33.11:613,33,0	0/0:33,0:32:96.33:0,96,2183	0/0:23,0:23:33.69:0,34,745	0/0:9,0:9:15.99:0,16,533
chr10	102362356	.	T	TA	11770.93	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-0.642;DP=607;FS=9.505;HRun=0;HaplotypeScore=84.9679;InbreedingCoeff=0.9997;MQ=88.25;MQ0=0;MQRankSum=-7.782;QD=44.09;ReadPosRankSum=2.952;VQSLOD=4.7887;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,34:37:99:1649,105,0	0/0:9,0:9:27.09:0,27,378	0/0:22,0:22:63.19:0,63,863	0/0:25,0:25:72.17:0,72,928	0/0:27,0:27:78.26:0,78,1091	1/1:1,25:26:78.27:1244,78,0	1/1:1,22:23:66.22:1042,66,0	0/0:23,0:23:63.21:0,63,881	1/1:2,19:21:60.20:956,60,0	0/0:16,0:16:48.15:0,48,657	0/0:16,0:16:48.16:0,48,671	0/0:31,0:31:93.30:0,93,1283	0/0:22,0:22:66.21:0,66,906	1/1:1,17:18:51.17:800,51,0	1/1:1,32:33:93.32:1478,93,0	0/0:19,0:19:57.19:0,57,794	1/1:4,20:24:69.22:1075,69,0	0/0:15,0:15:45.12:0,45,593	0/0:12,0:12:36.12:0,36,503	0/0:21,0:21:63.21:0,63,881	0/0:32,0:32:96.32:0,96,1342	1/1:1,10:11:30.10:479,30,0	1/1:4,20:24:60.18:945,60,0	1/1:2,21:23:63.21:1003,63,0	1/1:3,24:27:69.24:1100,69,0	0/0:17,0:17:48.15:0,48,656	0/0:21,0:21:63.20:0,63,865	0/0:12,0:12:36.12:0,36,504
chr10	102362407	.	G	GTACA	17318.32	PASS	AB=0.963;AC=23;AF=0.411;AN=56;BaseQRankSum=15.674;DP=649;FS=7.056;HRun=0;HaplotypeScore=131.0220;InbreedingCoeff=0.9363;MQ=95.41;MQ0=0;MQRankSum=-12.739;QD=59.92;ReadPosRankSum=4.718;VQSLOD=6.8267;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:39:90.31:2544,90,0	0/0:11,0:11:33.11:0,33,686	0/0:34,0:34:96.17:0,96,1817	0/0:33,0:33:81.08:0,81,1428	0/0:27,0:27:81.19:0,81,1487	1/1:0,22:22:66.23:1903,66,0	1/1:9,13:22:54.07:1296,54,0	0/0:25,0:25:72.01:0,72,1100	1/1:2,12:14:39.13:1076,39,0	0/0:17,0:17:48.16:0,48,1005	0/0:24,0:24:72.13:0,72,1311	0/0:22,0:22:66.22:0,66,1345	0/0:26,0:26:78.01:0,78,1330	1/1:1,19:20:48.14:1312,48,0	1/1:7,23:30:84.25:2189,84,0	0/1:25,1:26:7.91:8,0,1289	1/1:4,22:28:56.86:1581,57,0	0/0:20,0:20:57.12:0,57,1074	0/0:16,0:16:48.06:0,48,873	0/0:27,0:27:75.16:0,75,1433	0/0:23,0:23:66.17:0,66,1327	1/1:0,18:18:45.15:1290,45,0	1/1:1,28:30:59.92:1724,60,0	1/1:3,19:22:39.07:994,39,0	1/1:4,14:18:54.17:1401,54,0	0/0:18,0:18:54.17:0,54,1058	0/0:20,0:20:60.07:0,60,1126	0/0:17,0:17:51.18:0,51,1047
chr10	102362717	.	G	GT	10685.81	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-2.493;DP=711;FS=2.048;HRun=3;HaplotypeScore=72.5177;InbreedingCoeff=0.9998;MQ=84.24;MQ0=0;MQRankSum=-3.663;QD=33.92;ReadPosRankSum=4.194;VQSLOD=5.4388;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,44:47:99:1764,126,0	0/0:11,0:11:27.08:0,27,324	0/0:30,0:30:78.07:0,78,906	0/0:22,0:22:57.05:0,57,641	0/0:28,0:28:78.09:0,78,897	1/1:0,24:24:63.21:882,63,0	1/1:3,24:27:51.17:714,51,0	0/0:28,0:28:78.22:0,78,916	1/1:1,18:19:42.14:588,42,0	0/0:27,0:27:78.23:0,78,926	0/0:21,0:21:60.14:0,60,702	0/0:16,0:16:48.12:0,48,551	0/0:17,0:17:42.13:0,42,503	1/1:2,14:17:39.08:523,39,0	1/1:1,35:36:93.31:1290,93,0	0/0:32,0:32:96.28:0,96,1140	1/1:3,39:42:99:1428,102,0	0/0:29,0:29:84.26:0,84,1007	0/0:18,0:18:51.13:0,51,590	0/0:22,0:22:57.17:0,57,683	0/0:29,0:29:81.23:0,81,954	1/1:0,18:18:51.13:691,51,0	1/1:2,27:29:66.22:922,66,0	1/1:3,31:34:84.28:1170,84,0	1/1:1,21:22:51.17:713,51,0	0/0:23,0:23:63.19:0,63,756	0/0:22,0:21:63.17:0,63,731	0/0:21,0:21:57.15:0,57,664
chr10	102363024	.	ATATG	A	1990.73	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=1.288;DP=711;FS=1.142;HRun=0;HaplotypeScore=134.9833;InbreedingCoeff=0.8075;MQ=69.61;MQ0=7;MQRankSum=1.242;QD=11.99;ReadPosRankSum=-1.358;VQSLOD=2.9127;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:37:21.91:0,22,1229	0/0:10,0:10:18.05:0,18,378	0/0:37,0:21:4.21:0,4,23	0/0:27,0:16:2.99:0,3,23	0/0:26,0:26:42.08:0,42,809	0/0:21,0:21:27.08:0,27,477	0/0:26,0:26:22.55:0,23,405	1/1:26,0:26:18.01:164,18,0	0/0:16,0:16:11.12:0,11,533	0/0:30,0:30:57.19:0,57,1283	0/0:22,1:23:36.08:0,36,800	0/0:28,0:28:57.13:0,57,1081	0/0:23,0:23:51.13:0,51,1006	0/0:20,0:20:27.06:0,27,473	0/0:21,0:21:27.09:0,27,521	0/0:24,1:25:12.96:0,13,1255	0/0:30,0:30:54.09:0,54,848	0/0:13,0:23:31.28:0,31,459	1/1:19,9:28:27.04:337,27,0	1/1:7,17:24:39.13:614,39,0	1/1:21,13:34:33.08:494,33,0	0/0:21,0:21:36.09:0,36,606	0/0:22,0:22:39.07:0,39,605	0/0:25,0:25:24.03:0,24,353	0/1:23,0:23:85.32:85,0,716	0/0:38,0:38:90.27:0,90,1898	1/1:15,16:31:30.10:472,30,0	0/0:16,0:16:24.03:0,24,518
chr10	102363177	.	C	CCCA	4400.09	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=1.396;DP=635;FS=4.411;HRun=0;HaplotypeScore=139.3087;InbreedingCoeff=0.8892;MQ=60.10;MQ0=18;MQRankSum=-5.551;QD=20.66;ReadPosRankSum=-0.672;VQSLOD=4.5607;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:34.69:35,0,202	0/0:10,0:10:27.07:0,27,388	0/0:37,0:16:45.06:0,45,557	0/0:26,0:17:19.23:0,19,393	0/0:17,0:17:48.11:0,48,687	1/1:5,16:22:27.99:550,28,0	1/1:1,22:23:30.10:668,30,0	0/0:34,0:33:92.43:0,92,1252	1/1:6,17:21:34.67:614,35,0	0/0:22,0:21:59.89:0,60,834	0/0:24,0:24:61.43:0,61,910	0/0:18,0:18:51.11:0,51,702	0/0:18,0:18:54.10:0,54,783	1/1:5,10:13:23.93:388,24,0	1/1:14,11:21:35.39:547,35,0	0/0:28,0:28:84.22:0,84,1192	1/1:8,6:11:1.95:364,2,0	0/0:23,0:23:63.18:0,63,959	0/0:16,0:15:42.03:0,42,544	0/0:37,0:37:99:0,111,1626	0/0:26,0:26:72.13:0,72,988	1/1:9,11:16:20.85:287,21,0	1/1:6,9:13:19.59:260,20,0	1/1:6,5:10:23.02:358,23,0	1/1:6,11:17:21.81:329,22,0	0/0:34,0:34:99:0,102,1427	0/0:28,0:27:72.19:0,72,1077	0/0:24,0:24:27.27:0,27,740
chr10	102363206	.	T	TACACACACACACATACAC	4797.31	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=4.750;DP=750;FS=0.000;HRun=0;HaplotypeScore=320.9133;InbreedingCoeff=0.7888;MQ=51.38;MQ0=17;MQRankSum=-3.512;QD=18.89;ReadPosRankSum=-1.195;VQSLOD=2.1276;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:14.93:0,15,1927	0/0:7,0:7:18.06:0,18,801	0/0:44,0:14:35.85:0,36,615	0/0:46,0:24:21.24:0,21,1049	0/0:21,0:21:57.18:0,57,2169	1/1:28,1:29:18.04:582,18,0	1/1:22,0:22:16.98:275,17,0	0/0:38,0:36:77.10:0,77,2119	1/1:33,1:34:31:861,31,0	0/0:25,0:25:60.21:0,60,2056	0/0:25,0:26:57.19:0,57,2045	0/0:22,0:22:26.38:0,26,1990	0/0:21,0:21:45.15:0,45,1784	1/1:12,2:14:15:806,15,0	1/1:11,14:28:15.04:833,15,0	0/0:27,0:27:66.23:0,66,2739	0/1:20,0:17:0.87:263,0,1	0/0:25,0:27:69.21:0,69,2512	0/0:16,0:13:27.06:0,27,589	0/0:36,0:36:96.33:0,96,3933	0/0:25,0:24:60.04:0,60,2249	1/1:12,13:28:2.79:24,3,0	0/0:4,13:22:0.96:0,1,3	1/1:4,11:21:6.02:314,6,0	1/1:10,16:28:14.81:805,15,0	0/0:11,0:34:71.69:0,72,1906	0/0:23,0:22:51.14:0,51,1744	0/1:4,0:26:35.90:36,0,1262
chr10	102363733	.	CGTTGTT	C	2802.48	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.505;DP=540;FS=19.692;HRun=0;HaplotypeScore=105.1219;InbreedingCoeff=0.9217;MQ=64.92;MQ0=5;MQRankSum=-6.950;QD=16.78;ReadPosRankSum=-0.453;VQSLOD=1.3268;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,23:35:18.06:352,18,0	0/0:5,0:5:12.04:0,12,348	0/0:23,0:13:27.01:0,27,568	0/0:27,0:23:26.01:0,26,701	0/0:22,0:22:50.80:0,51,1430	0/0:21,0:21:54.10:0,54,1656	0/0:24,0:25:45.07:0,45,1240	1/1:12,13:24:36.11:638,36,0	0/0:14,0:14:24.08:0,24,744	0/0:18,0:18:42.14:0,42,1312	0/0:14,0:14:33.03:0,33,794	0/0:17,0:17:36.12:0,36,1143	0/0:13,0:13:27.09:0,27,877	0/0:22,0:22:39.13:0,39,1148	0/0:16,0:16:27.08:0,27,792	0/0:11,0:11:24.08:0,24,796	0/0:22,0:22:51.11:0,51,1438	1/1:7,10:17:9.03:190,9,0	1/1:17,5:22:26.94:424,27,0	1/1:7,15:22:42.07:815,42,0	1/1:16,10:27:3.01:63,3,0	0/0:6,0:6:12.03:0,12,311	0/0:3,0:3:6.02:0,6,183	0/0:32,0:31:72.22:0,72,2232	0/0:20,0:20:30.10:0,30,945	0/0:25,0:25:66.21:0,66,2045	1/1:10,9:19:24.08:507,24,0	0/0:17,0:17:18.06:0,18,588
chr10	102363878	.	G	GC	5263.76	PASS	AB=0.545;AC=19;AF=0.339;AN=56;BaseQRankSum=2.464;DP=549;FS=0.362;HRun=8;HaplotypeScore=68.9341;InbreedingCoeff=0.9432;MQ=64.45;MQ0=0;MQRankSum=2.083;QD=25.43;ReadPosRankSum=3.165;VQSLOD=5.5873;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:98.99:0,99,905	0/0:8,0:8:14.97:0,15,131	0/0:11,0:11:20.36:0,20,166	0/0:21,0:19:44.58:0,45,373	0/0:11,0:11:27.01:0,27,247	1/1:5,18:23:51.12:588,51,0	1/1:4,21:25:48.14:554,48,0	0/0:16,0:16:42.01:0,42,381	1/1:6,12:18:33.10:381,33,0	0/0:16,0:16:36.01:0,36,329	0/0:10,0:10:23.94:0,24,206	0/0:27,1:28:37.27:0,37,588	0/0:17,0:17:48.03:0,48,439	1/1:2,14:16:36.11:414,36,0	1/1:2,18:20:51.15:589,51,0	0/0:25,1:26:19.37:0,19,428	1/1:3,37:41:71.85:1080,72,0	0/0:20,0:20:42:0,42,384	0/0:19,0:19:51.02:0,51,467	0/0:14,0:14:36:0,36,325	0/0:33,0:33:77.95:0,78,695	1/1:2,5:7:18.05:202,18,0	1/1:1,9:10:18.05:207,18,0	1/1:4,30:35:87.26:1000,87,0	0/1:2,10:12:0.39:250,0,0	0/0:22,0:22:57.02:0,57,518	0/0:25,0:25:66.04:0,66,604	0/0:3,0:3:9:0,9,82
chr10	102364307	.	GC	G	6063.95	PASS	AB=0.526;AC=13;AF=0.232;AN=56;BaseQRankSum=11.860;DP=688;FS=1.090;HRun=1;HaplotypeScore=65.8685;InbreedingCoeff=0.8996;MQ=89.21;MQ0=0;MQRankSum=-6.692;QD=39.38;ReadPosRankSum=-0.928;VQSLOD=5.0311;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1895	0/0:12,0:12:36.12:0,36,569	0/0:24,0:24:66.23:0,66,1054	0/0:26,0:26:75.25:0,75,1185	0/0:24,0:24:72.23:0,72,1128	0/0:28,0:28:84.23:0,84,1291	0/0:30,0:30:90.29:0,90,1413	1/1:0,32:32:93.31:1300,93,0	0/0:26,0:26:78.23:0,78,1215	0/0:22,0:22:66.23:0,66,1055	0/0:15,0:15:45.15:0,45,714	0/0:23,0:23:69.24:0,69,1103	0/0:28,0:28:84.29:0,84,1324	0/0:30,0:30:90.28:0,90,1410	0/0:39,0:39:99:0,117,1800	0/0:28,0:28:84.28:0,84,1321	0/0:33,0:33:99:0,99,1580	0/0:25,0:25:72.22:0,72,1126	1/1:0,16:16:48.16:671,48,0	1/1:0,19:19:51.17:713,51,0	1/1:0,35:35:99:1427,102,0	0/0:31,0:31:87.28:0,87,1365	0/0:14,0:14:42.14:0,42,670	0/0:17,0:17:51.17:0,51,811	0/0:19,0:19:54.18:0,54,863	0/1:2,18:20:35.77:695,0,36	1/1:0,23:23:63.21:881,63,0	1/1:0,9:9:27.09:378,27,0
chr10	102365666	.	A	ACC	3590.28	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-6.193;DP=527;FS=10.547;HRun=9;HaplotypeScore=81.9144;InbreedingCoeff=0.9376;MQ=78.85;MQ0=0;MQRankSum=-0.051;QD=20.63;ReadPosRankSum=-0.269;VQSLOD=1.5944;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:78.10:0,78,809	0/0:8,0:8:17.87:0,18,174	0/0:24,0:25:4.76:0,5,244	0/0:21,0:21:1.16:0,1,302	0/0:20,0:20:45.10:0,45,477	1/1:10,1:13:19.95:160,20,0	1/1:8,10:20:22.61:267,23,0	0/0:25,0:25:32.97:0,33,339	1/1:2,19:22:24.06:369,24,0	0/0:15,0:15:36.06:0,36,374	0/0:19,0:19:48.11:0,48,510	0/0:25,0:25:69.13:0,69,722	0/0:16,0:16:45.09:0,45,478	1/1:2,12:15:23.57:332,24,0	1/1:2,19:21:35.91:537,36,0	0/0:31,1:32:34.99:0,35,783	1/1:3,22:26:56.68:832,57,0	0/0:15,0:15:45.11:0,45,478	0/0:10,0:10:24.03:0,24,244	0/0:20,0:20:44.74:0,45,459	0/0:22,0:22:63.14:0,63,666	1/1:1,6:9:14.40:162,14,0	1/1:4,10:14:21.07:323,21,0	1/1:2,14:17:26.58:377,27,0	1/1:5,12:17:15.05:231,15,0	0/0:18,0:18:51.12:0,51,536	0/0:17,0:17:45.11:0,45,479	0/0:9,0:9:21.03:0,21,223
chr10	102365854	.	T	TAC	2119.48	PASS	AB=0.930;AC=33;AF=0.635;AN=52;BaseQRankSum=1.024;DP=544;FS=0.666;HRun=0;HaplotypeScore=107.9950;InbreedingCoeff=0.1010;MQ=63.30;MQ0=13;MQRankSum=-0.039;QD=5.22;ReadPosRankSum=0.942;VQSLOD=2.3596;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:16:2.04:0,2,7	0/0:7,0:7:9.02:0,9,98	./.	./.	0/0:19,0:22:14.86:0,15,141	1/1:16,4:19:21.05:286,21,0	0/1:20,14:37:28.60:119,0,29	1/1:13,0:13:0.89:2,1,0	1/1:7,2:9:6.91:91,7,0	0/0:21,0:21:14.96:0,15,162	0/1:22,1:23:37.42:37,0,217	0/1:18,1:19:46.52:47,0,128	0/0:13,0:13:12.15:0,12,129	0/1:21,1:20:49.84:117,0,50	0/1:19,0:19:35.31:139,0,35	0/1:20,2:23:14.82:15,0,247	1/1:18,3:19:8.94:109,9,0	0/1:11,0:10:5.30:5,0,27	0/1:13,0:13:5.53:83,0,6	1/1:23,0:24:4.36:17,4,0	1/1:19,0:19:2.54:19,3,0	0/1:21,2:23:38.47:189,0,38	1/1:11,1:12:15:166,15,0	1/1:17,16:34:6.67:481,7,0	1/1:9,7:15:3.01:44,3,0	1/1:20,0:19:29.66:211,30,0	1/1:18,0:19:14.28:82,14,0	1/1:6,0:6:2.98:21,3,0
chr10	102365885	.	A	AGG	1872.04	PASS	AB=0.817;AC=11;AF=0.196;AN=56;BaseQRankSum=4.781;DP=586;FS=11.706;HRun=0;HaplotypeScore=126.6074;InbreedingCoeff=0.1446;MQ=51.14;MQ0=17;MQRankSum=-6.036;QD=10.95;ReadPosRankSum=-1.198;VQSLOD=2.5139;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,3:22:68.35:72,0,68	0/0:10,0:10:27.09:0,27,417	0/0:14,0:5:15.05:0,15,216	0/0:21,0:9:12.09:0,12,292	0/0:25,0:25:57.16:0,57,834	0/0:24,0:22:37.50:0,38,487	0/0:47,0:47:59.54:0,60,809	0/1:7,8:14:99:314,0,116	0/0:8,0:8:19.85:0,20,252	0/0:28,0:26:78.26:0,78,1219	0/0:21,0:21:43.95:0,44,643	0/0:17,0:16:43.69:0,44,643	0/0:14,0:13:33.09:0,33,491	0/0:24,0:22:17.02:0,17,204	0/0:24,0:23:54.11:0,54,740	0/0:21,0:21:55.98:0,56,834	0/0:26,0:24:42.81:0,43,594	0/1:11,0:11:15.66:16,0,224	0/1:20,3:20:91.81:414,0,92	0/1:22,5:26:55.46:201,0,55	0/1:21,1:22:91.48:91,0,129	0/0:23,0:23:42.95:0,43,548	0/0:15,0:15:30.95:0,31,356	0/0:36,0:36:21.49:0,21,554	0/0:17,0:16:26.12:0,26,367	0/1:3,5:21:72.73:519,0,73	1/1:8,5:18:26.69:366,27,0	1/1:1,0:7:3.01:32,3,0
chr10	102365899	.	G	GCA	205.12	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=4.023;DP=543;FS=4.062;HRun=0;HaplotypeScore=132.8744;InbreedingCoeff=0.3836;MQ=54.35;MQ0=12;MQRankSum=-4.480;QD=3.20;ReadPosRankSum=-4.332;VQSLOD=0.9570;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,4:20:18.42:236,18,0	0/0:10,0:10:24.06:0,24,295	0/0:15,0:5:11.87:0,12,148	0/0:17,0:8:23.94:0,24,280	0/0:20,0:20:39.13:0,39,498	0/0:23,0:22:36.07:0,36,462	0/0:42,0:42:69.08:0,69,862	0/0:14,0:14:20.94:0,21,253	0/0:6,0:6:18.03:0,18,212	0/0:27,0:25:57.18:0,57,722	0/0:15,0:15:33.09:0,33,410	0/0:19,0:18:43.40:0,43,541	0/0:14,0:13:21.06:0,21,269	0/0:25,0:24:12.96:0,13,154	0/0:21,0:20:51.15:0,51,653	0/0:19,0:19:39.11:0,39,491	0/0:24,0:22:45.11:0,45,578	0/0:10,0:10:18.06:0,18,232	0/1:23,0:20:41.54:42,0,278	0/0:29,0:27:26.55:0,27,330	0/0:22,0:22:11.81:0,12,139	0/0:23,0:23:36.56:0,37,494	0/0:11,0:11:18.06:0,18,237	0/0:34,0:34:65.47:0,65,817	0/0:15,0:14:21.05:0,21,257	0/1:17,0:17:41.08:41,0,100	0/0:18,0:18:12.55:0,13,318	0/0:6,0:6:4.64:0,5,75
chr10	102365924	.	CTGTG	C	4134.24	PASS	AB=0.944;AC=20;AF=0.357;AN=56;BaseQRankSum=-3.555;DP=452;FS=17.445;HRun=0;HaplotypeScore=114.4351;InbreedingCoeff=0.7690;MQ=58.62;MQ0=6;MQRankSum=1.213;QD=19.78;ReadPosRankSum=3.912;VQSLOD=2.3651;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:13:2.79:0,3,73	0/0:12,0:12:24.08:0,24,353	0/0:20,0:10:11.25:0,11,161	0/0:15,0:6:6.49:0,6,137	0/0:15,0:15:24.06:0,24,397	1/1:15,1:16:33.10:478,33,0	1/1:34,2:36:10.03:710,10,0	0/0:18,0:18:42.13:0,42,670	1/1:3,1:4:12.04:181,12,0	0/0:21,0:21:39.08:0,39,580	0/0:13,0:13:20.89:0,21,385	0/0:18,0:18:27.02:0,27,488	0/0:9,0:9:24.06:0,24,435	1/1:5,17:22:11.59:197,12,0	1/1:19,1:22:47.22:629,47,0	0/1:17,0:17:14.09:14,0,588	1/1:19,2:22:25.13:644,25,0	0/0:12,0:10:24.03:0,24,383	0/0:13,0:12:18.06:0,18,313	0/0:18,0:16:21.07:0,21,366	0/0:13,0:13:9.50:0,10,141	1/1:13,1:14:26.60:432,27,0	1/1:6,2:8:15.05:229,15,0	1/1:30,2:32:41.69:594,42,0	0/1:14,0:15:25.43:25,0,29	0/0:6,0:6:15.04:0,15,236	0/0:16,0:15:33.56:0,34,479	0/0:11,0:10:18.06:0,18,318
chr10	102365984	.	A	AAGAC	1148.88	PASS	AB=0.985;AC=11;AF=0.204;AN=54;BaseQRankSum=-5.453;DP=524;FS=20.828;HRun=0;HaplotypeScore=158.6701;InbreedingCoeff=0.3535;MQ=43.94;MQ0=24;MQRankSum=-4.638;QD=7.56;ReadPosRankSum=1.426;VQSLOD=1.4321;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:18:0.10:0,0,11	0/0:8,0:8:8.34:0,8,73	./.	0/0:5,0:2:2.19:0,2,9	0/0:6,0:6:2.70:0,3,25	0/0:20,0:18:17.92:0,18,144	0/0:28,0:28:16.68:0,17,110	1/1:28,0:26:20.04:315,20,0	0/0:23,0:23:17.80:0,18,119	0/0:15,0:15:35.67:0,36,253	0/0:14,0:13:9:0,9,100	0/0:18,0:18:23.73:0,24,316	0/0:19,0:18:23.72:0,24,261	0/0:28,0:27:32.60:0,33,244	0/0:26,0:25:29.43:0,29,233	0/0:25,0:23:47.71:0,48,484	0/0:23,0:21:16.69:0,17,228	0/0:21,0:16:26.68:0,27,185	0/1:19,0:18:62.87:160,0,63	0/1:16,0:11:6.61:13,0,7	0/1:11,0:10:44.37:44,0,84	0/0:25,0:24:20.66:0,21,165	0/0:25,0:22:12.28:0,12,99	0/0:24,0:21:26.74:0,27,218	0/0:19,0:17:24.40:0,24,198	1/1:3,14:23:1.44:385,1,0	1/1:21,0:19:12.23:177,12,0	0/1:11,1:10:18.49:201,0,18
chr10	102365988	.	CAG	C	324.93	PASS	AB=0.977;AC=14;AF=0.250;AN=56;BaseQRankSum=0.268;DP=548;FS=3.197;HRun=0;HaplotypeScore=136.7512;InbreedingCoeff=0.0891;MQ=44.61;MQ0=24;MQRankSum=1.397;QD=1.27;ReadPosRankSum=-1.331;VQSLOD=2.5499;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,5:20:11.49:128,11,0	0/0:10,0:10:3.01:0,3,37	0/0:3,0:2:2.50:0,2,9	0/0:7,0:3:6:0,6,54	0/0:7,0:7:3:0,3,25	0/0:21,0:19:12.41:0,12,100	0/0:28,0:28:2.83:0,3,24	0/1:29,0:28:8.74:97,0,9	0/0:24,0:24:1.97:0,2,7	0/0:16,0:16:1.55:0,2,116	0/0:16,0:15:11.13:0,11,103	0/1:20,0:20:9.86:10,0,251	0/1:20,1:20:13.04:13,0,186	0/0:26,0:25:7.18:0,7,54	1/1:27,0:26:1:3,1,0	0/1:26,0:24:57.61:58,0,423	0/0:20,0:18:6.43:0,6,45	0/0:20,0:15:9.85:0,10,88	0/0:18,1:18:15.08:0,15,182	0/1:17,2:14:46.06:97,0,46	0/0:12,0:11:14.78:0,15,159	0/1:25,0:24:0.42:0,0,1	0/0:26,0:23:4.25:0,4,26	1/1:22,0:19:1.86:4,2,0	0/1:21,0:19:0.11:0,0,0	0/0:23,0:23:35.72:0,36,394	0/1:21,1:20:42.16:45,0,42	0/0:14,0:11:18.03:0,18,220
chr10	102365990	.	G	GAC	1317.39	PASS	AB=0.968;AC=11;AF=0.196;AN=56;BaseQRankSum=-5.302;DP=575;FS=34.583;HRun=0;HaplotypeScore=146.5904;InbreedingCoeff=0.4022;MQ=44.99;MQ0=24;MQRankSum=-5.460;QD=7.75;ReadPosRankSum=1.100;VQSLOD=1.3638;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:22:16.35:112,16,0	0/0:12,0:12:11.92:0,12,111	0/0:3,0:2:2.50:0,2,9	0/0:9,0:3:8.55:0,9,61	0/0:9,0:9:5.45:0,5,49	0/0:21,0:19:30.19:0,30,248	0/0:29,0:29:21.48:0,21,157	1/1:6,23:28:27.90:489,28,0	0/0:25,0:25:22.46:0,22,151	0/0:17,0:17:44.52:0,45,346	0/0:19,0:18:17.26:0,17,153	0/0:22,0:22:32.54:0,33,381	0/0:21,0:20:16.35:0,16,235	0/0:28,0:27:44.72:0,45,347	0/0:27,0:26:28.02:0,28,229	0/0:26,0:24:57.31:0,57,618	0/0:21,0:19:36.04:0,36,251	0/0:20,0:15:32.71:0,33,235	0/1:19,0:18:45.45:195,0,45	0/1:18,2:15:6.95:117,0,7	0/1:12,1:12:39.41:39,0,50	0/0:25,0:24:23.88:0,24,192	0/0:25,0:22:17.48:0,17,160	0/0:22,0:19:29.92:0,30,239	0/0:24,0:21:24.43:0,24,198	0/1:27,0:27:99:166,0,100	1/1:20,2:20:25.42:345,25,0	0/1:14,0:11:18:18,0,70
chr10	102366072	.	A	AT	15116.10	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-6.794;DP=633;FS=3.767;HRun=4;HaplotypeScore=79.8497;InbreedingCoeff=0.9770;MQ=78.66;MQ0=0;MQRankSum=-5.036;QD=35.99;ReadPosRankSum=1.302;VQSLOD=5.1105;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,25:31:75.18:985,75,0	0/0:5,0:5:15.03:0,15,161	0/0:24,0:24:71.85:0,72,765	0/0:27,0:27:55.74:0,56,616	0/0:17,0:17:51.15:0,51,578	1/1:4,23:27:66.19:902,66,0	1/1:0,25:25:66.22:903,66,0	1/1:2,27:29:81.19:1065,81,0	1/1:2,15:17:45.15:615,45,0	0/0:35,0:35:99:0,99,1122	0/0:20,0:20:54.15:0,54,612	0/0:28,0:28:81.23:0,81,919	0/0:18,0:18:54.15:0,54,612	1/1:0,21:21:60.16:800,60,0	1/1:1,30:31:78.17:1031,78,0	0/0:26,0:26:72.20:0,72,817	1/1:0,23:23:69.23:944,69,0	0/0:13,0:13:36.06:0,36,394	1/1:1,18:19:57.09:737,57,0	1/1:2,24:26:66.22:903,66,0	1/1:1,39:40:99:1354,99,0	1/1:2,22:24:69.23:935,69,0	1/1:2,17:19:51.17:695,51,0	1/1:0,25:25:69.01:943,69,0	1/1:0,23:23:63.21:862,63,0	1/1:1,13:14:5.09:458,5,0	1/1:0,21:20:57.19:778,57,0	1/1:0,5:5:15.05:205,15,0
chr10	102366552	.	T	TC	9484.63	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.437;DP=755;FS=0.000;HRun=0;HaplotypeScore=102.5550;InbreedingCoeff=0.9998;MQ=72.94;MQ0=1;MQRankSum=-0.515;QD=43.91;ReadPosRankSum=-2.752;VQSLOD=3.7386;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,38:40:99:1581,100,0	0/0:9,0:9:27.06:0,27,358	0/0:28,0:28:78.22:0,78,1033	0/0:22,0:22:59.27:0,59,763	0/0:25,0:25:72.23:0,72,990	0/0:38,0:38:99:0,114,1594	0/0:22,0:22:66.22:0,66,922	1/1:2,37:39:99:1795,114,0	0/0:28,0:28:84.28:0,84,1175	0/0:30,0:30:87.29:0,87,1217	0/0:25,0:25:75.25:0,75,1040	0/0:24,0:24:69.22:0,69,946	0/0:29,0:29:87.28:0,87,1200	0/0:36,0:36:99:0,108,1487	0/0:38,0:38:99:0,114,1594	0/0:29,0:29:84.27:0,84,1158	0/0:36,0:35:99:0,102,1426	0/0:29,0:29:72.72:0,73,1086	1/1:2,13:14:42.12:646,42,0	1/1:1,25:26:65.17:1053,65,0	1/1:0,38:38:99:1774,111,0	0/0:20,0:20:57.17:0,57,764	0/0:21,0:21:63.20:0,63,864	0/0:30,0:30:84.27:0,84,1157	0/0:20,0:20:57.17:0,57,780	1/1:0,20:20:60.20:957,60,0	1/1:0,22:22:63.21:1007,63,0	1/1:0,16:16:42.14:671,42,0
chr10	102366858	.	C	CTT	6232.82	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-14.531;DP=640;FS=15.470;HRun=9;HaplotypeScore=76.1175;InbreedingCoeff=0.9996;MQ=77.07;MQ0=1;MQRankSum=-0.629;QD=34.06;ReadPosRankSum=-3.876;VQSLOD=2.8996;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:22:54.18:831,54,0	0/0:15,0:15:39.07:0,39,407	0/0:18,0:18:26.99:0,27,285	0/0:20,0:20:28.98:0,29,257	0/0:31,0:31:75.13:0,75,798	0/0:25,0:25:72.16:0,72,757	0/0:17,0:17:48.11:0,48,508	1/1:7,17:24:51.15:749,51,0	0/0:25,0:26:74.91:0,75,778	0/0:21,0:21:54.13:0,54,574	0/0:27,0:26:63.12:0,63,663	0/0:21,0:21:60.15:0,60,639	0/0:26,0:26:69.15:0,69,733	0/0:14,0:14:32.57:0,33,328	0/0:27,0:27:78.18:0,78,822	0/0:25,0:25:69.16:0,69,726	0/0:31,0:31:84.12:0,84,871	0/0:27,0:27:72.11:0,72,747	1/1:4,15:19:45.15:690,45,0	1/1:4,21:26:60.17:897,60,0	1/1:2,14:16:34.36:511,34,0	0/0:22,0:22:57.14:0,57,607	0/0:20,0:20:48.05:0,48,494	0/0:24,0:24:66.08:0,66,672	0/0:19,0:19:57.14:0,57,606	1/1:4,30:34:58.37:1299,58,0	1/1:3,21:25:41.63:610,42,0	1/1:1,15:16:42.14:647,42,0
chr10	102368492	.	GA	G	4794.09	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.342;DP=703;FS=0.323;HRun=9;HaplotypeScore=84.5396;InbreedingCoeff=0.9870;MQ=74.01;MQ0=1;MQRankSum=0.359;QD=22.51;ReadPosRankSum=-1.326;VQSLOD=4.8960;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,39:48:99:1013,109,0	0/0:16,0:16:41.91:0,42,463	0/0:23,0:19:17.08:0,17,432	0/0:26,0:25:45.50:0,45,486	0/0:32,0:32:93.28:0,93,1073	0/0:21,0:21:57.16:0,57,648	0/0:20,0:20:54.16:0,54,618	1/1:3,39:42:99:1023,114,0	0/0:21,0:21:57.15:0,57,648	0/0:23,0:23:66.19:0,66,759	0/0:26,0:26:66.18:0,66,751	0/0:26,0:26:69.18:0,69,771	0/0:27,0:27:75.22:0,75,863	0/0:30,0:30:84.08:0,84,949	0/0:30,0:30:87.24:0,87,992	0/0:21,0:22:66.02:0,66,733	0/0:29,0:29:75.18:0,75,840	0/0:19,0:19:54.12:0,54,600	1/1:5,17:22:51.02:466,51,0	1/1:1,25:26:72.04:658,72,0	1/1:2,16:18:48.02:439,48,0	0/0:26,0:26:75.21:0,75,857	0/0:30,0:30:84.24:0,84,960	0/0:33,0:33:90.27:0,90,1039	0/0:10,0:10:27.08:0,27,312	1/1:2,27:29:18.19:673,18,0	1/1:0,22:22:48.03:439,48,0	1/1:1,5:6:9:82,9,0
chr10	102369003	.	TCAG	T	3525.21	PASS	AC=20;AF=0.588;AN=34;BaseQRankSum=-4.198;DP=605;FS=0.598;HRun=0;HaplotypeScore=117.5644;InbreedingCoeff=0.7824;MQ=68.39;MQ0=7;MQRankSum=0.437;QD=11.87;ReadPosRankSum=2.350;VQSLOD=3.1283;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:5,0:9:3.01:0,3,39	0/0:20,0:13:0.47:0,0,1	0/0:24,0:18:1.82:0,2,5	./.	1/1:15,0:14:3.01:39,3,0	1/1:23,18:41:33.11:433,33,0	./.	1/1:12,16:28:39.13:512,39,0	./.	./.	0/0:23,0:39:48.12:0,48,632	0/0:14,0:20:29.81:0,30,409	1/1:23,9:33:33.04:396,33,0	1/1:11,14:25:36.12:473,36,0	0/0:7,0:20:33.11:0,33,441	1/1:22,24:46:60.19:788,60,0	0/0:23,0:42:71.68:0,72,947	1/1:13,0:18:5.95:42,6,0	./.	1/1:29,0:35:5.91:42,6,0	./.	./.	1/1:14,17:31:45.15:591,45,0	./.	./.	1/1:10,0:24:29.76:209,30,0	./.
chr10	102369524	.	G	GTCCCAGCC	12924.27	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-3.568;DP=638;FS=2.219;HRun=0;HaplotypeScore=158.9970;InbreedingCoeff=0.9501;MQ=81.38;MQ0=0;MQRankSum=-13.840;QD=83.92;ReadPosRankSum=-4.614;VQSLOD=4.3123;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:12,20:34:69.24:2651,69,0	0/0:10,0:10:30.10:0,30,812	0/0:18,0:18:42.14:0,42,1066	0/0:20,0:21:2.07:0,2,796	0/0:14,0:14:39.13:0,39,1064	0/0:20,0:20:60.21:0,60,1638	0/0:38,0:38:99:0,102,2561	1/1:20,14:35:87.30:3177,87,0	0/0:27,0:27:75.26:0,75,1973	0/0:26,0:26:63.20:0,63,1455	0/0:11,0:11:33.11:0,33,869	0/0:35,0:35:99:0,102,2781	0/0:28,0:28:84.26:0,84,2061	0/0:42,0:42:99:0,108,2902	0/0:36,0:36:99:0,102,2632	0/0:29,0:29:84.27:0,84,2219	0/0:41,0:41:99:0,117,3085	0/0:21,0:21:63.22:0,63,1644	1/1:6,6:14:36.11:1210,36,0	1/1:5,7:12:24.08:910,24,0	1/1:8,9:17:33.11:1297,33,0	0/0:17,0:17:45.14:0,45,1160	0/0:12,0:12:33.09:0,33,842	0/0:27,0:27:72.25:0,72,1931	0/0:11,0:11:30.10:0,30,819	1/1:8,12:20:51.18:2161,51,0	1/1:4,14:19:33.11:1424,33,0	1/1:3,0:3:6.49:96,6,0
chr10	102370028	.	C	CT	12570.43	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-17.531;DP=714;FS=0.000;HRun=0;HaplotypeScore=63.9498;InbreedingCoeff=0.9985;MQ=80.58;MQ0=0;MQRankSum=-1.805;QD=42.61;ReadPosRankSum=3.558;VQSLOD=5.4205;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.26:0,84,1146	0/0:6,0:6:18.06:0,18,252	0/0:17,0:17:48.11:0,48,600	0/0:19,0:19:48.12:0,48,625	0/0:31,0:31:90.30:0,90,1255	1/1:1,24:25:66.23:1055,66,0	1/1:1,36:37:99:1631,102,0	0/0:22,0:22:66.17:0,66,884	1/1:0,23:23:66.23:1055,66,0	0/0:24,0:24:72.24:0,72,1005	0/0:9,0:9:27.09:0,27,377	0/0:30,0:29:87.29:0,87,1215	0/0:22,0:22:63.21:0,63,880	1/1:1,28:29:33.31:1109,33,0	1/1:0,38:38:96.33:1535,96,0	0/0:34,1:35:57.37:0,57,1359	1/1:0,48:48:99:2109,132,0	0/0:22,0:22:57.19:0,57,792	0/0:24,0:24:72.24:0,72,1003	0/0:20,0:20:60.19:0,60,819	0/0:39,0:39:99:0,114,1592	1/1:0,20:20:57.19:911,57,0	1/1:1,24:25:66.23:1055,66,0	1/1:1,31:32:84.29:1343,84,0	1/1:0,18:18:48.16:768,48,0	0/0:29,0:29:81.26:0,81,1113	0/0:27,0:27:81.25:0,81,1106	0/0:10,0:10:30.10:0,30,419
chr10	102370234	.	A	AAC	1919.17	PASS	AB=0.990;AC=15;AF=0.268;AN=56;BaseQRankSum=1.543;DP=609;FS=10.721;HRun=0;HaplotypeScore=87.2028;InbreedingCoeff=0.6581;MQ=66.63;MQ0=4;MQRankSum=-4.633;QD=8.31;ReadPosRankSum=-6.071;VQSLOD=0.7261;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:10,22:34:8.25:60,8,0	0/0:8,0:8:13:0,13,150	0/0:31,0:15:26.01:0,26,201	0/0:18,0:10:21.75:0,22,152	0/0:25,0:25:29.82:0,30,378	0/0:19,0:19:25.19:0,25,310	0/1:21,0:21:1.67:2,0,295	1/1:41,0:42:42.29:594,42,0	0/0:15,0:15:1.82:0,2,187	0/0:26,0:26:67.12:0,67,568	0/0:19,0:19:7.10:0,7,285	0/0:16,0:16:2.90:0,3,221	0/0:16,0:16:37.77:0,38,298	0/0:16,0:16:32.87:0,33,285	0/0:25,0:32:57.09:0,57,468	0/0:18,0:19:38.67:0,39,308	0/0:25,0:26:54.66:0,55,434	0/0:11,0:11:20.64:0,21,169	1/1:23,0:23:27.90:389,28,0	0/1:30,0:30:22.92:208,0,23	1/1:9,0:9:10.76:148,11,0	0/0:20,0:20:38.87:0,39,358	0/0:21,0:23:39.83:0,40,315	0/0:21,0:21:47.78:0,48,410	0/0:16,0:16:28.39:0,28,296	0/1:32,0:33:4.92:356,0,5	1/1:27,0:27:10.47:241,10,0	1/1:11,0:11:6.09:98,6,0
chr10	102370913	.	GCTTCTACTTC	G	13791.26	PASS	AB=0.532;AC=15;AF=0.268;AN=56;BaseQRankSum=16.425;DP=732;FS=0.000;HRun=0;HaplotypeScore=233.3517;InbreedingCoeff=0.9019;MQ=64.58;MQ0=1;MQRankSum=-17.273;QD=81.61;ReadPosRankSum=1.017;VQSLOD=4.6373;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:30:78.27:2541,78,0	0/0:18,0:18:51.18:0,51,2533	0/0:29,0:29:87.30:0,87,3955	0/0:26,0:26:75.73:0,76,3423	0/0:30,0:30:90.30:0,90,4553	0/0:23,0:23:69.24:0,69,3434	0/0:37,0:37:99:0,111,5408	1/1:5,16:21:54.18:1742,54,0	0/0:21,0:21:63.22:0,63,3251	0/0:27,0:27:81.28:0,81,4212	0/0:25,0:25:72.23:0,72,3696	0/0:32,0:32:90.30:0,90,4454	0/0:40,0:40:99:0,117,5983	0/0:31,0:31:93.32:0,93,4847	0/0:34,0:34:99:0,102,5267	0/0:32,0:32:84.29:0,84,4426	0/0:33,0:33:99:0,99,5180	0/0:25,0:25:72.25:0,72,3747	1/1:5,6:11:18.06:558,18,0	1/1:6,20:26:63.22:2093,63,0	1/1:5,13:18:42.14:1363,42,0	0/0:27,0:27:81.27:0,81,4051	0/0:23,0:23:69.24:0,69,3477	0/0:32,0:31:86.35:0,86,4350	0/0:17,0:17:51.18:0,51,2684	0/1:3,22:25:91.01:2128,0,91	1/1:2,31:33:90.31:2965,90,0	1/1:1,4:5:12.04:400,12,0
chr10	102370971	.	C	CA	7171.60	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-3.437;DP=717;FS=8.797;HRun=3;HaplotypeScore=95.5374;InbreedingCoeff=0.9979;MQ=76.17;MQ0=0;MQRankSum=-4.731;QD=33.05;ReadPosRankSum=-1.265;VQSLOD=3.9380;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,39:48:99:1626,117,0	0/0:13,0:13:30.09:0,30,360	0/0:23,0:22:56.89:0,57,642	0/0:18,0:18:42:0,42,453	0/0:27,0:27:72.20:0,72,851	0/0:23,0:23:63.19:0,63,753	0/0:35,0:35:99:0,102,1223	1/1:7,36:43:99:1358,103,0	0/0:22,0:22:63.19:0,63,756	0/0:20,0:20:51.15:0,51,608	0/0:14,0:14:39.09:0,39,445	0/0:32,0:32:93.28:0,93,1115	0/0:28,0:28:72.22:0,72,863	0/0:28,0:28:84.23:0,84,984	0/0:31,0:31:93.26:0,93,1093	0/0:29,0:29:84.24:0,84,995	0/0:31,0:31:93.17:0,93,1070	0/0:27,0:27:78.22:0,78,921	1/1:3,22:25:66.18:871,66,0	1/1:1,18:19:45.10:607,45,0	1/1:1,23:24:57.15:775,57,0	0/0:20,0:20:54.15:0,54,636	0/0:28,0:28:81.20:0,81,936	0/0:27,0:27:75.23:0,75,900	0/0:24,0:24:69.19:0,69,814	1/1:7,16:23:21.16:698,21,0	1/1:2,27:29:72.20:985,72,0	1/1:0,6:6:18.06:252,18,0
chr10	102371260	.	G	GC	18674.67	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-14.044;DP=589;FS=4.789;HRun=1;HaplotypeScore=51.5959;InbreedingCoeff=0.9969;MQ=83.00;MQ0=1;MQRankSum=-3.957;QD=42.73;ReadPosRankSum=2.899;VQSLOD=5.1484;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:87.30:1390,87,0	0/0:7,0:7:21.07:0,21,285	0/0:19,0:19:54.16:0,54,704	0/0:14,0:14:34.20:0,34,463	0/0:20,0:20:60.20:0,60,838	1/1:1,22:23:57.19:910,57,0	1/1:0,19:19:54.18:863,54,0	1/1:1,28:28:84.25:1273,84,0	1/1:1,24:25:54.18:862,54,0	0/0:20,0:20:60.20:0,60,838	0/0:20,0:20:60.20:0,60,836	0/0:15,0:15:45.15:0,45,629	0/0:12,0:12:33.08:0,33,440	1/1:1,24:25:66.22:1055,66,0	1/1:0,20:20:57.19:910,57,0	0/0:25,0:25:75.25:0,75,1046	1/1:0,27:27:81.28:1294,81,0	1/1:0,13:13:36.12:575,36,0	1/1:0,19:19:57.18:874,57,0	1/1:0,24:24:66.22:1044,66,0	1/1:1,35:35:96.33:1532,96,0	1/1:0,19:19:51.17:814,51,0	1/1:0,15:15:41.94:669,42,0	1/1:0,22:22:63.21:1006,63,0	1/1:1,16:17:48.16:767,48,0	1/1:2,31:33:15.40:1352,15,0	1/1:1,24:25:57.19:910,57,0	1/1:0,12:12:36.12:574,36,0
chr10	102372310	.	CT	C	5504.22	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=8.662;DP=540;FS=11.296;HRun=3;HaplotypeScore=60.4903;InbreedingCoeff=0.9992;MQ=86.91;MQ0=0;MQRankSum=-2.978;QD=32.00;ReadPosRankSum=2.962;VQSLOD=4.4715;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.21:0,66,932	0/0:8,0:8:24.08:0,24,345	0/0:34,0:30:49.98:0,50,1108	0/0:29,0:21:60.19:0,60,826	0/0:18,0:18:51.13:0,51,678	1/1:0,21:21:45.14:558,45,0	1/1:0,20:20:51.16:632,51,0	0/0:27,0:27:81.26:0,81,1134	1/1:0,12:12:33.10:408,33,0	0/0:14,0:14:42.14:0,42,586	0/0:15,0:15:45.15:0,45,643	0/0:21,0:21:60.20:0,60,861	0/0:25,0:25:72.18:0,72,977	1/1:0,16:16:45.14:558,45,0	1/1:1,21:22:57.18:707,57,0	0/0:20,0:20:60.20:0,60,854	1/1:3,18:21:51.12:615,51,0	0/0:14,0:14:39.11:0,39,539	0/0:25,0:25:75.24:0,75,1063	0/0:20,0:20:60.19:0,60,844	0/0:16,0:16:45.12:0,45,602	1/1:0,12:12:33.10:409,33,0	1/1:0,11:11:30.09:371,30,0	1/1:0,15:15:42.10:504,42,0	1/1:0,22:22:60.19:744,60,0	0/0:27,0:27:81.26:0,81,1150	0/0:23,0:22:51.17:0,51,734	0/0:9,0:9:24.08:0,24,346
chr10	102373429	.	AG	A	1312.95	PASS	AB=0.775;AC=10;AF=0.179;AN=56;BaseQRankSum=11.817;DP=682;FS=107.362;HRun=1;HaplotypeScore=124.2736;InbreedingCoeff=-0.2177;MQ=70.30;MQ0=0;MQRankSum=-11.355;QD=6.37;ReadPosRankSum=2.733;VQSLOD=0.0060;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,2074	0/0:6,0:6:18.06:0,18,287	0/0:22,0:22:63.21:0,63,997	0/0:30,0:30:84.28:0,84,1325	0/0:27,0:27:78.27:0,78,1247	0/1:7,7:14:99:251,0,291	0/1:16,5:21:98:98,0,659	0/0:24,0:24:69.24:0,69,1095	0/1:11,4:15:99:121,0,470	0/0:21,0:21:60.20:0,60,959	0/0:27,0:27:81.26:0,81,1270	0/0:34,0:34:99:0,102,1575	0/0:29,0:29:84.19:0,84,1263	0/1:17,2:19:35.49:35,0,622	0/1:20,9:29:99:263,0,724	0/0:35,0:35:99:0,105,1656	0/1:16,7:23:79.73:80,0,617	0/0:33,1:34:54.40:0,54,1439	0/0:15,0:15:42.12:0,42,629	0/0:31,0:31:93.30:0,93,1459	0/0:26,0:26:78.24:0,78,1198	0/1:23,6:29:99:176,0,814	0/1:10,8:18:99:286,0,335	0/1:12,8:20:26.31:26,0,534	0/1:14,4:18:99:122,0,482	0/0:23,0:23:69.23:0,69,1083	0/0:34,0:34:99:0,99,1564	0/0:14,0:14:42.14:0,42,671
chr10	102373440	.	A	ATCCC	3484.16	PASS	AB=0.776;AC=10;AF=0.179;AN=56;BaseQRankSum=12.121;DP=663;FS=118.301;HRun=0;HaplotypeScore=160.7037;InbreedingCoeff=-0.2190;MQ=74.38;MQ0=0;MQRankSum=-11.721;QD=18.83;ReadPosRankSum=4.176;VQSLOD=0.5813;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,2694	0/0:4,0:4:12.03:0,12,214	0/0:24,0:24:69.22:0,69,1350	0/0:23,0:23:66.22:0,66,1317	0/0:33,0:33:96.31:0,96,1935	0/1:7,7:14:99:566,0,273	0/1:13,4:17:99:275,0,766	0/0:24,0:24:69.24:0,69,1448	0/1:12,4:16:99:291,0,647	0/0:25,0:25:72.24:0,72,1472	0/0:28,0:28:84.25:0,84,1683	0/0:33,0:33:96.33:0,96,2012	0/0:29,0:29:81.27:0,81,1684	0/1:16,2:18:99:123,0,830	0/1:18,9:27:99:596,0,932	0/0:35,0:35:99:0,105,2201	0/1:14,5:19:99:180,0,706	0/0:34,0:34:96.30:0,96,1966	0/0:12,0:12:36.12:0,36,721	0/0:32,0:32:96.32:0,96,1957	0/0:26,0:26:75.20:0,75,1473	0/1:19,6:25:99:427,0,961	0/1:8,8:16:99:617,0,335	0/1:10,5:15:99:117,0,593	0/1:14,4:18:99:293,0,609	0/0:26,0:26:75.26:0,75,1559	0/0:33,0:33:93.32:0,93,1950	0/0:12,0:12:36.12:0,36,755
chr10	102373446	.	CAAGTGAATGGTAAA	C	5842.86	PASS	AB=0.773;AC=10;AF=0.179;AN=56;BaseQRankSum=11.971;DP=656;FS=107.427;HRun=0;HaplotypeScore=281.1481;InbreedingCoeff=-0.2204;MQ=76.25;MQ0=0;MQRankSum=-11.319;QD=31.75;ReadPosRankSum=4.975;VQSLOD=0.5487;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,8040	0/0:3,0:3:9.03:0,9,646	0/0:24,0:24:72.25:0,72,4756	0/0:24,0:24:72.25:0,72,3782	0/0:33,0:33:99:0,99,6665	0/1:7,7:14:99:868,0,1124	0/1:13,4:17:99:459,0,2335	0/0:26,0:26:78.26:0,78,4523	0/1:12,4:16:99:473,0,2338	0/0:25,0:25:75.25:0,75,4818	0/0:26,0:26:78.27:0,78,5602	0/0:34,0:34:99:0,102,6423	0/0:28,0:28:81.73:0,82,5091	0/1:16,2:18:99:202,0,2809	0/1:18,9:27:99:1000,0,2785	0/0:37,0:37:99:0,111,6861	0/1:13,5:18:99:436,0,2244	0/0:32,0:32:96.33:0,96,6336	0/0:10,0:10:30.06:0,30,1276	0/0:30,0:30:90.28:0,90,5824	0/0:25,0:25:75.24:0,75,4794	0/1:18,6:24:99:700,0,3373	0/1:10,9:19:99:973,0,1361	0/1:9,5:14:99:262,0,1264	0/1:13,4:17:99:471,0,2272	0/0:25,0:25:75.25:0,75,5074	0/0:35,0:35:99:0,102,6825	0/0:13,0:13:39.13:0,39,2816
chr10	102373960	.	G	GA	4146.42	PASS	AB=0.650;AC=13;AF=0.232;AN=56;BaseQRankSum=-4.463;DP=619;FS=10.596;HRun=9;HaplotypeScore=81.0329;InbreedingCoeff=0.9120;MQ=78.20;MQ0=2;MQRankSum=-1.277;QD=23.56;ReadPosRankSum=-1.760;VQSLOD=3.2181;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,105,904	0/0:8,0:8:20.98:0,21,179	0/0:39,0:31:11.01:0,11,348	0/0:32,0:23:25.28:0,25,255	0/0:20,0:20:50.99:0,51,442	0/0:28,0:28:65.97:0,66,573	0/0:18,0:18:50.97:0,51,438	1/1:9,23:33:26.69:726,27,0	0/0:24,0:24:62.95:0,63,543	0/0:18,0:18:18.79:0,19,338	0/0:17,0:18:50.03:0,50,423	0/0:19,0:19:47.98:0,48,417	0/0:16,0:16:35.97:0,36,312	0/0:14,0:14:32.99:0,33,286	0/0:21,0:21:44.95:0,45,387	0/0:23,0:23:56.97:0,57,495	0/0:29,0:29:54.40:0,54,650	0/0:18,0:18:41.94:0,42,358	1/1:5,21:27:61.20:634,61,0	1/1:5,29:34:84.23:928,84,0	1/1:2,18:20:16.07:405,16,0	0/0:15,0:15:32.98:0,33,286	0/0:15,0:15:35.97:0,36,308	0/0:14,0:14:32.97:0,33,286	0/0:11,0:11:20.98:0,21,182	1/1:3,17:20:28.09:538,28,0	1/1:2,27:29:46.14:737,46,0	0/1:6,7:13:4.96:178,0,5
chr10	102375224	.	GT	G	10446.79	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=7.238;DP=581;FS=23.836;HRun=7;HaplotypeScore=78.9793;InbreedingCoeff=0.9944;MQ=73.07;MQ0=0;MQRankSum=1.851;QD=27.28;ReadPosRankSum=1.849;VQSLOD=3.2862;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.24:0,96,1162	0/0:4,0:4:12.04:0,12,151	0/0:14,0:14:33.05:0,33,355	0/0:15,0:15:27.83:0,28,327	0/0:22,0:22:66.15:0,66,784	1/1:1,23:24:66.15:672,66,0	1/1:0,27:27:72.16:734,72,0	1/1:2,22:24:63.11:637,63,0	1/1:1,19:20:51.11:518,51,0	0/0:27,0:27:72.23:0,72,901	0/0:13,0:13:39.12:0,39,478	0/0:29,0:29:78.17:0,78,946	0/0:20,0:20:54.16:0,54,665	1/1:0,20:20:60.14:610,60,0	1/1:2,10:12:30.06:302,30,0	0/0:18,0:18:54.14:0,54,662	1/1:0,33:33:93.21:947,93,0	1/1:1,34:35:87.20:887,87,0	1/1:1,24:25:69.12:696,69,0	1/1:0,9:9:27.06:275,27,0	1/1:3,29:32:90.16:910,90,0	1/1:0,17:17:51.12:520,51,0	1/1:1,14:15:42.09:427,42,0	1/1:1,24:25:66.15:672,66,0	1/1:2,8:10:21.04:212,21,0	1/1:5,19:24:60.10:603,60,0	1/1:2,16:18:45.10:458,45,0	1/1:0,13:13:36.08:367,36,0
chr10	102377340	.	G	GA	5291.12	PASS	AB=0.778;AC=20;AF=0.357;AN=56;BaseQRankSum=-15.184;DP=705;FS=0.000;HRun=10;HaplotypeScore=89.0833;InbreedingCoeff=0.8152;MQ=72.25;MQ0=0;MQRankSum=-0.653;QD=20.35;ReadPosRankSum=0.098;VQSLOD=5.2171;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,120,960	0/0:13,0:13:35.94:0,36,293	0/0:32,0:33:14.90:0,15,249	0/1:21,0:20:14.24:14,0,121	0/0:25,1:27:29.92:0,30,436	1/1:1,19:21:51.13:544,51,0	1/1:2,30:34:74.89:765,75,0	0/0:1,0:30:61.81:0,62,193	1/1:2,19:21:45.11:480,45,0	0/0:21,3:24:1.12:0,1,320	0/0:14,0:15:40.97:0,41,323	0/0:30,1:31:27.88:0,28,432	0/0:27,0:28:67.94:0,68,545	1/1:4,23:28:56.98:590,57,0	0/1:4,16:20:10.18:313,0,10	0/0:20,2:22:18.94:0,19,362	1/1:4,23:27:13.87:552,14,0	0/0:10,0:43:61.57:0,62,177	0/0:2,0:19:34.74:0,35,102	0/0:2,0:21:36.03:0,36,113	0/0:1,0:24:44.81:0,45,130	1/1:3,20:23:44.16:489,44,0	1/1:2,13:15:30.98:309,31,0	1/1:4,28:32:84.17:883,84,0	1/1:1,16:17:33.08:352,33,0	0/0:4,0:22:42.65:0,43,154	0/0:6,0:23:29.44:0,29,101	0/0:1,0:22:34.63:0,35,100
chr10	102378722	.	T	TG	3233.06	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=0.533;DP=504;FS=4.576;HRun=8;HaplotypeScore=65.2928;InbreedingCoeff=0.9067;MQ=86.65;MQ0=1;MQRankSum=-1.255;QD=21.41;ReadPosRankSum=0.395;VQSLOD=4.0752;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,1:45:73.44:0,73,924	0/0:7,0:7:21.01:0,21,192	0/0:20,0:18:24.39:0,24,298	0/0:21,0:22:35.97:0,36,379	0/0:16,0:16:36:0,36,325	1/1:3,10:13:2.62:284,3,0	1/1:8,15:23:36.11:415,36,0	0/0:21,0:21:39.33:0,39,357	1/1:3,11:14:30.09:346,30,0	0/0:14,0:14:39.02:0,39,357	0/0:9,0:9:24:0,24,216	0/0:29,0:29:71.99:0,72,653	0/0:21,0:21:54.01:0,54,494	1/1:6,9:15:31.33:346,31,0	1/1:3,10:13:2.67:284,3,0	0/0:19,0:19:48.01:0,48,439	1/1:4,25:29:72.21:831,72,0	0/0:21,0:21:54.02:0,54,494	0/0:15,1:16:10.28:0,10,332	0/0:10,0:10:30.02:0,30,273	0/0:36,0:36:84.50:0,84,769	1/1:1,8:9:15.04:173,15,0	1/1:0,8:8:21.06:242,21,0	1/1:2,11:14:27.08:312,27,0	1/1:6,7:13:18.05:207,18,0	0/0:7,0:23:34.63:0,35,101	0/0:20,0:19:44.02:0,44,385	0/0:1,0:2:2.04:0,2,6
chr10	102383215	.	G	GA	4178.77	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-10.576;DP=635;FS=0.000;HRun=9;HaplotypeScore=63.8017;InbreedingCoeff=0.9754;MQ=79.69;MQ0=0;MQRankSum=-1.514;QD=23.88;ReadPosRankSum=-1.192;VQSLOD=3.9541;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:74.96:0,75,651	0/0:12,0:12:35.99:0,36,313	0/0:20,0:20:35.93:0,36,311	0/0:19,0:18:6.49:0,6,207	0/0:25,0:25:50.98:0,51,443	0/0:27,0:27:47.59:0,48,574	0/0:20,0:19:50.98:0,51,443	1/1:15,21:36:42.62:656,43,0	0/0:20,0:20:32.60:0,33,444	0/0:21,0:21:50.98:0,51,443	0/0:31,0:31:71.96:0,72,621	0/0:22,0:22:56.97:0,57,495	0/0:19,0:19:47.96:0,48,412	0/0:21,0:21:50.93:0,51,435	0/0:37,0:37:99:0,102,882	0/0:22,1:23:23.76:0,24,428	0/0:32,1:33:41.79:0,42,592	0/0:13,0:13:35.99:0,36,312	1/1:5,18:23:57.15:630,57,0	1/1:4,21:25:17.03:631,17,0	1/1:1,15:17:45.12:498,45,0	0/0:17,0:17:38.99:0,39,339	0/0:11,0:11:29.99:0,30,260	0/0:17,0:17:41.99:0,42,364	0/0:23,0:23:62.95:0,63,538	1/1:3,27:30:81.20:886,81,0	1/1:9,16:25:25.09:505,25,0	1/1:1,18:19:13.05:372,13,0
chr10	102383620	.	CT	C	7410.67	PASS	AB=0.721;AC=36;AF=0.643;AN=56;BaseQRankSum=9.490;DP=539;FS=3.822;HRun=11;HaplotypeScore=53.4532;InbreedingCoeff=0.8749;MQ=70.61;MQ0=0;MQRankSum=0.070;QD=19.71;ReadPosRankSum=1.776;VQSLOD=6.0374;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,1:21:32.50:0,32,545	0/0:2,0:3:8.86:0,9,78	0/0:13,0:13:15.41:0,15,154	0/1:9,1:9:6.49:6,0,77	0/0:25,0:25:63:0,63,640	1/1:2,26:28:74.91:616,75,0	1/1:3,13:16:35.95:296,36,0	0/1:8,17:25:0.10:358,0,0	1/1:1,16:17:41.95:345,42,0	0/0:18,0:17:36.08:0,36,377	0/0:18,0:18:45.04:0,45,460	0/0:19,0:20:53.95:0,54,550	0/0:19,1:20:29.47:0,29,503	1/1:2,15:17:44.95:369,45,0	1/1:2,12:14:38.95:320,39,0	0/0:24,0:24:63.15:0,63,665	1/1:3,29:32:86.89:714,87,0	1/1:0,20:20:56.94:468,57,0	1/1:3,13:16:38.95:320,39,0	1/1:5,23:28:68.91:566,69,0	1/1:1,12:13:35.96:296,36,0	1/1:1,10:11:29.95:246,30,0	1/1:4,12:16:9.02:269,9,0	1/1:3,18:21:50.92:419,51,0	1/1:4,18:22:53.93:443,54,0	1/1:3,15:19:17.99:343,18,0	1/1:4,25:30:76.93:622,77,0	1/1:0,20:20:47.94:394,48,0
chr10	102387775	.	T	TC	5299.49	PASS	AB=1.000;AC=49;AF=0.907;AN=54;BaseQRankSum=-2.395;DP=248;FS=3.403;HRun=2;HaplotypeScore=80.1347;InbreedingCoeff=0.1747;MQ=65.78;MQ0=0;MQRankSum=-2.265;QD=21.72;ReadPosRankSum=0.052;VQSLOD=4.6746;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,8:14:26.29:300,26,0	1/1:0,3:3:8.98:91,9,0	0/1:10,0:8:39.19:39,0,53	0/1:8,0:6:12.87:13,0,60	1/1:1,1:2:2.92:17,3,0	1/1:1,6:7:21.05:234,21,0	1/1:2,19:21:54.03:549,54,0	1/1:1,3:4:12.04:152,12,0	1/1:4,4:8:21.04:231,21,0	1/1:2,8:10:22.16:250,22,0	./.	0/1:2,0:2:0:0,0,0	1/1:3,4:7:0.14:130,0,0	1/1:2,9:11:1.37:240,1,0	1/1:0,4:4:11.98:112,12,0	0/0:0,2:2:2.37:0,2,8	1/1:11,10:19:44.93:494,45,0	1/1:8,9:17:42.02:512,42,0	1/1:6,10:16:42.54:541,43,0	1/1:2,4:6:11.79:89,12,0	1/1:5,14:19:5.04:62,5,0	1/1:1,2:3:8.84:67,9,0	1/1:1,5:6:8.92:68,9,0	1/1:6,10:16:29.98:325,30,0	1/1:0,12:12:35.96:361,36,0	1/1:2,3:5:7.26:77,7,0	1/1:1,8:9:26.37:237,26,0	1/1:1,2:3:9.02:108,9,0
chr10	102387780	.	GCC	G	2412.91	PASS	AB=0.669;AC=36;AF=0.643;AN=56;BaseQRankSum=-0.772;DP=249;FS=9.023;HRun=12;HaplotypeScore=83.4384;InbreedingCoeff=0.6069;MQ=66.14;MQ0=0;MQRankSum=-1.548;QD=11.89;ReadPosRankSum=2.358;VQSLOD=1.8071;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:8,1:12:1.96:27,0,2	1/1:1,2:3:6.01:61,6,0	0/0:9,0:9:7.19:0,7,117	0/0:9,0:7:15.03:0,15,170	0/0:0,0:2:4.99:0,5,17	1/1:0,7:7:21.01:203,21,0	1/1:5,15:22:47.55:451,48,0	1/1:2,3:5:8.97:83,9,0	1/1:3,4:7:12:121,12,0	0/1:3,0:10:10.63:13,0,11	0/0:0,0:3:0:0,0,0	0/0:0,0:3:2.97:0,3,10	0/0:4,0:7:10.44:0,10,45	1/1:6,4:11:11.81:104,12,0	1/1:2,2:4:6:61,6,0	0/0:0,1:2:2.49:0,2,9	1/1:6,12:17:26.75:256,27,0	1/1:7,7:15:17.67:164,18,0	1/1:5,8:14:29.69:271,30,0	1/1:1,5:6:8.99:81,9,0	1/1:7,9:17:3.05:31,3,0	1/1:1,2:5:5.48:24,5,0	1/1:1,4:6:11.96:109,12,0	1/1:5,12:18:14.77:135,15,0	1/1:6,7:13:22.54:236,23,0	0/0:0,0:4:7.39:0,7,29	1/1:4,5:9:15.01:152,15,0	0/0:1,0:3:4.99:0,5,19
chr10	102387953	.	GCGCGCACACACACA	G	1692.85	PASS	AB=0.957;AC=16;AF=0.308;AN=52;BaseQRankSum=-0.163;DP=265;FS=10.870;HRun=0;HaplotypeScore=92.1845;InbreedingCoeff=-0.0614;MQ=66.72;MQ0=11;MQRankSum=0.089;QD=9.67;ReadPosRankSum=0.638;VQSLOD=0.6439;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:27.09:0,27,921	0/0:3,0:2:3.01:0,3,65	0/0:7,0:3:0.47:0,0,1	0/0:14,0:8:3.01:0,3,30	0/0:7,0:7:12.03:0,12,362	0/0:7,0:7:9.93:0,10,528	1/1:19,0:19:5:140,5,0	0/1:15,0:15:77.40:197,0,77	0/1:4,0:3:36.83:37,0,92	0/0:7,0:7:18.05:0,18,491	0/0:1,0:1:0:0,0,0	0/0:4,0:4:6.02:0,6,207	./.	0/0:6,0:5:8.59:0,9,409	0/0:2,0:2:6.02:0,6,234	0/0:1,0:1:3.01:0,3,86	0/1:20,0:20:99:342,0,782	0/1:19,0:19:50.26:50,0,419	0/1:8,0:7:75.78:76,0,262	./.	1/1:21,0:18:5.02:46,5,0	0/1:7,0:6:96.72:102,0,97	1/1:4,0:4:8.20:60,8,0	0/1:31,0:31:99:232,0,976	0/0:12,0:11:15.05:0,15,575	0/1:3,10:13:8:405,0,8	0/1:8,0:8:99:139,0,355	0/1:6,0:4:13.74:14,0,110
chr10	102389337	.	C	CT	4107.20	PASS	AB=0.710;AC=30;AF=0.536;AN=56;BaseQRankSum=-6.584;DP=414;FS=1.430;HRun=11;HaplotypeScore=57.0618;InbreedingCoeff=0.5504;MQ=83.13;MQ0=0;MQRankSum=-0.062;QD=15.98;ReadPosRankSum=-0.912;VQSLOD=4.0802;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:28:76.67:0,77,576	0/1:3,1:4:34.47:41,0,34	0/1:17,1:18:21.78:30,0,22	0/0:13,0:13:12.80:0,13,78	0/0:21,1:23:6.59:0,7,368	1/1:1,10:11:3.82:220,4,0	0/1:4,13:17:10.40:269,0,10	0/1:11,13:26:0.26:303,0,0	1/1:1,13:14:33.07:335,33,0	0/0:11,0:12:25.93:0,26,191	0/0:11,0:12:22.91:0,23,166	0/0:11,0:11:29.88:0,30,232	0/0:14,0:14:29.87:0,30,232	1/1:4,15:19:45.04:442,45,0	1/1:1,9:10:21.04:213,21,0	0/0:10,0:10:17.90:0,18,139	1/1:1,12:13:9.83:281,10,0	1/1:3,0:19:28.18:146,28,0	1/1:6,15:22:49.01:498,49,0	1/1:14,8:22:12.82:304,13,0	0/1:3,2:5:11.22:74,0,11	1/1:1,6:8:17.87:167,18,0	1/1:3,10:13:6.82:251,7,0	0/1:2,3:6:11.38:63,0,11	1/1:4,9:13:21.04:213,21,0	0/0:1,0:10:18.33:0,18,53	1/1:4,13:17:12.48:257,12,0	0/0:2,0:24:32.58:0,33,94
chr10	102389696	.	T	TAA	6630.78	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-7.785;DP=496;FS=0.000;HRun=6;HaplotypeScore=55.4638;InbreedingCoeff=0.9881;MQ=70.85;MQ0=4;MQRankSum=2.361;QD=33.83;ReadPosRankSum=2.448;VQSLOD=4.2495;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.64:0,67,779	0/0:8,0:8:21.03:0,21,241	0/0:11,0:11:18.05:0,18,212	0/0:5,0:5:11.99:0,12,126	0/0:29,0:29:78.24:0,78,950	1/1:6,20:25:54.18:913,54,0	1/1:0,16:16:42.14:710,42,0	0/0:34,0:34:87.19:0,87,1051	1/1:0,8:7:18.06:304,18,0	0/0:22,0:22:51.14:0,51,613	0/0:17,0:17:45.12:0,45,537	0/0:21,0:21:63.19:0,63,757	0/0:22,0:22:60.16:0,60,707	1/1:1,12:15:30.10:493,30,0	1/1:1,10:11:27.09:457,27,0	0/0:16,0:16:42.13:0,42,512	1/1:2,22:24:60.21:1015,60,0	0/0:26,0:26:75.23:0,75,915	0/0:5,0:5:15.05:0,15,183	0/0:22,0:22:66.21:0,66,805	0/0:12,0:12:33.10:0,33,401	1/1:0,14:13:39.09:628,39,0	1/1:1,21:21:45:761,45,0	1/1:0,5:6:15.05:254,15,0	1/1:4,16:21:48.16:812,48,0	1/1:0,0:18:45.22:162,45,0	0/0:27,0:27:75.20:0,75,890	1/1:0,0:15:34.93:123,35,0
chr10	102389992	.	AAGAAAGAG	A	2212.36	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=1.480;DP=328;FS=5.316;HRun=0;HaplotypeScore=78.8784;InbreedingCoeff=0.7332;MQ=66.97;MQ0=0;MQRankSum=-2.659;QD=12.09;ReadPosRankSum=-0.440;VQSLOD=1.2459;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:44.80:0,45,612	0/0:5,0:5:12.01:0,12,299	0/1:11,0:9:0:0,0,0	0/0:6,0:4:5.20:0,5,29	0/0:20,0:20:56.99:0,57,869	1/1:12,0:12:9.03:184,9,0	1/1:12,0:12:3.01:40,3,0	1/1:14,0:12:21:188,21,0	1/1:8,0:8:3.01:63,3,0	0/0:11,0:11:24.07:0,24,678	0/0:11,0:11:32.94:0,33,467	0/0:3,0:3:6.01:0,6,150	0/0:10,0:10:21:0,21,372	1/1:7,0:7:6.02:99,6,0	1/1:10,0:10:6.02:121,6,0	0/0:8,0:8:15.02:0,15,375	1/1:18,0:18:35.85:332,36,0	1/1:11,17:28:6.02:154,6,0	1/1:15,0:15:27.04:257,27,0	0/1:10,0:10:13.98:98,0,14	0/0:9,0:9:8.39:0,8,39	1/1:10,0:10:17.89:204,18,0	1/1:8,0:8:12.04:251,12,0	1/1:8,0:8:11.97:99,12,0	1/1:4,8:12:15.05:328,15,0	0/0:12,0:12:24.06:0,24,622	0/0:14,0:14:5.60:0,6,27	0/0:14,0:14:29.91:0,30,575
chr10	102390008	.	GAGAAAGAGAGAA	G	2911.82	PASS	AB=1.000;AC=28;AF=0.519;AN=54;BaseQRankSum=0.271;DP=330;FS=2.932;HRun=0;HaplotypeScore=95.1428;InbreedingCoeff=0.5425;MQ=59.42;MQ0=2;MQRankSum=-2.370;QD=14.07;ReadPosRankSum=-0.250;VQSLOD=1.9696;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:46.04:0,46,811	0/0:6,0:6:15.02:0,15,475	./.	0/0:6,0:4:5.20:0,5,29	0/0:20,0:20:60:0,60,1197	1/1:1,13:14:9.03:323,9,0	1/1:1,13:14:3.01:87,3,0	1/1:21,0:17:18.85:184,19,0	1/1:2,5:7:3.01:109,3,0	0/0:9,0:9:24.07:0,24,974	0/0:13,0:13:38.97:0,39,825	0/0:2,0:2:6.02:0,6,232	0/0:12,0:12:33.04:0,33,769	1/1:0,7:7:6.02:192,6,0	1/1:0,10:10:6.02:214,6,0	0/0:7,0:7:18.05:0,18,686	1/1:18,1:19:24.98:545,25,0	1/1:21,0:21:4.07:13,4,0	1/1:13,0:13:26.86:257,27,0	0/1:13,0:13:75.46:75,0,189	0/0:9,0:9:8.08:0,8,149	1/1:0,8:8:23.91:380,24,0	1/1:0,9:9:11.49:436,11,0	1/1:9,0:9:14.98:184,15,0	0/1:13,0:13:42.85:43,0,154	0/1:14,0:14:44.25:44,0,889	0/1:15,0:15:20.52:21,0,123	0/0:13,0:13:32.92:0,33,877
chr10	102390012	.	AAGAG	A	2448.69	PASS	AB=1.000;AC=33;AF=0.611;AN=54;BaseQRankSum=3.619;DP=324;FS=3.557;HRun=0;HaplotypeScore=57.6992;InbreedingCoeff=0.6185;MQ=58.07;MQ0=2;MQRankSum=-1.132;QD=10.46;ReadPosRankSum=-0.483;VQSLOD=2.3278;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:10.91:11,0,330	0/0:5,0:5:15.02:0,15,260	./.	0/0:5,0:3:5.20:0,5,29	0/0:21,0:21:62.97:0,63,708	1/1:13,0:13:9.03:102,9,0	1/1:13,0:13:3:29,3,0	1/1:20,0:16:25:247,25,0	1/1:5,0:5:3.01:35,3,0	0/0:9,0:9:23.88:0,24,287	0/0:14,0:14:41.97:0,42,561	0/0:4,0:4:12.03:0,12,204	0/0:11,0:11:33.04:0,33,493	1/1:7,0:7:6.01:64,6,0	1/1:10,0:10:6.02:67,6,0	0/0:6,0:6:18.03:0,18,341	1/1:20,0:20:29.29:346,29,0	1/1:18,0:18:6.01:61,6,0	1/1:14,0:14:11.85:234,12,0	1/1:0,13:13:35.79:356,36,0	1/1:2,6:8:12.04:226,12,0	1/1:8,0:8:23.85:198,24,0	1/1:9,0:9:12.04:139,12,0	1/1:10,0:10:14.97:129,15,0	0/1:14,0:14:98.71:99,0,128	0/1:14,0:14:99:135,0,287	1/1:0,15:15:8.94:170,9,0	0/0:14,0:14:15.77:0,16,320
chr10	102390016	.	G	GAGAA	2055.04	PASS	AB=1.000;AC=25;AF=0.500;AN=50;BaseQRankSum=-2.264;DP=320;FS=1.992;HRun=0;HaplotypeScore=58.9600;InbreedingCoeff=0.1962;MQ=57.97;MQ0=2;MQRankSum=-1.172;QD=9.79;ReadPosRankSum=-2.669;VQSLOD=1.8821;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,10:23:15.04:300,15,0	0/1:6,0:6:9.97:10,0,125	./.	./.	0/0:22,0:22:18.04:0,18,234	0/1:13,0:13:17.85:18,0,47	1/1:13,0:13:3:29,3,0	1/1:18,0:14:16.13:87,16,0	0/0:5,0:5:3:0,3,28	1/1:4,7:12:18.06:401,18,0	0/0:14,0:14:12.04:0,12,184	0/0:4,0:4:9.03:0,9,137	0/0:11,0:11:15.05:0,15,231	0/1:7,0:7:21.79:23,0,22	0/1:10,0:10:18.43:21,0,18	0/0:6,0:6:12.04:0,12,184	0/1:18,0:18:13.02:79,0,13	0/0:18,0:18:9:0,9,88	./.	0/1:13,0:13:1.84:81,0,2	0/1:6,0:6:28.16:101,0,28	1/1:8,0:8:11.75:86,12,0	0/1:9,0:9:19.48:19,0,29	1/1:6,0:10:6.01:56,6,0	0/0:12,0:12:5.45:0,5,305	1/1:4,8:12:24.08:517,24,0	0/1:15,0:15:31.16:48,0,31	1/1:6,9:17:15.05:351,15,0
chr10	102390126	.	A	AAT	2672.35	PASS	AB=0.602;AC=20;AF=0.400;AN=50;BaseQRankSum=-8.959;DP=272;FS=6.868;HRun=0;HaplotypeScore=31.8384;InbreedingCoeff=0.6883;MQ=76.25;MQ0=1;MQRankSum=2.295;QD=25.45;ReadPosRankSum=0.752;VQSLOD=3.5858;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:36.11:0,36,446	./.	./.	0/0:9,0:5:2.60:0,3,34	0/0:14,0:14:33.09:0,33,397	1/1:3,16:19:36.12:589,36,0	1/1:3,3:6:9.03:147,9,0	0/0:33,0:33:57.16:0,57,685	1/1:2,2:4:3.01:49,3,0	0/0:11,0:11:21.07:0,21,260	0/0:4,0:4:12.04:0,12,149	0/0:6,0:6:12.02:0,12,136	0/0:7,0:7:18.03:0,18,200	1/1:2,2:4:12.03:166,12,0	0/1:2,3:5:25.16:135,0,25	0/0:7,0:7:15.04:0,15,175	1/1:4,20:24:20:834,20,0	0/0:16,0:16:42.11:0,42,497	0/0:12,0:12:18.06:0,18,223	0/0:6,0:6:9.03:0,9,112	0/0:4,0:4:9.03:0,9,112	1/1:0,2:2:6.02:98,6,0	./.	1/1:3,2:5:6.02:98,6,0	1/1:4,7:11:15.05:246,15,0	0/1:3,8:11:10.11:347,0,10	0/0:15,0:14:39.10:0,39,468	1/1:10,3:14:9.03:147,9,0
chr10	102390476	.	AT	A	2197.83	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-0.726;DP=404;FS=7.687;HRun=9;HaplotypeScore=54.0138;InbreedingCoeff=0.8683;MQ=74.23;MQ0=2;MQRankSum=0.266;QD=14.27;ReadPosRankSum=2.042;VQSLOD=3.1826;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:39.12:0,39,450	0/0:2,0:2:6.02:0,6,69	0/0:24,0:12:1.26:0,1,107	0/1:34,0:16:0.23:0,0,136	0/0:17,0:17:42.07:0,42,462	1/1:4,9:12:27.01:247,27,0	1/1:1,18:19:33.02:302,33,0	0/0:21,1:22:9.48:0,9,353	1/1:4,8:12:27.01:247,27,0	0/0:25,0:25:69.11:0,69,740	0/0:9,0:9:27:0,27,294	0/0:10,0:10:30.09:0,30,346	0/0:6,0:6:12.04:0,12,138	1/1:2,10:12:30.02:274,30,0	1/1:7,4:11:14.99:133,15,0	0/0:20,1:21:29.69:0,30,587	1/1:3,15:18:48.02:439,48,0	0/0:14,0:17:37.14:0,37,190	0/0:23,0:23:57.02:0,57,626	0/0:4,0:4:12.03:0,12,134	0/0:8,0:8:24.07:0,24,275	1/1:0,4:4:9:82,9,0	1/1:0,2:2:6:55,6,0	1/1:3,6:9:20.99:187,21,0	1/1:2,16:18:48.03:439,48,0	0/0:15,0:15:42.12:0,42,485	0/0:17,0:16:42.10:0,42,462	0/0:10,0:10:24.07:0,24,277
chr10	102390488	.	GA	G	1571.69	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-2.308;DP=421;FS=1.079;HRun=9;HaplotypeScore=64.2350;InbreedingCoeff=0.9205;MQ=74.57;MQ0=4;MQRankSum=1.403;QD=19.40;ReadPosRankSum=-0.268;VQSLOD=3.7280;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.12:0,48,541	0/0:3,0:3:9.03:0,9,104	0/0:35,1:14:7.81:0,8,75	0/0:52,2:24:25.30:0,25,176	0/0:18,0:18:49.70:0,50,557	0/0:11,0:10:24.07:0,24,277	0/0:17,0:17:36.11:0,36,415	1/1:5,14:19:32.82:362,33,0	0/0:10,0:10:30.07:0,30,335	0/0:23,0:23:63.05:0,63,707	0/0:9,0:9:21.06:0,21,242	0/0:10,0:10:30.06:0,30,334	0/0:5,0:5:12.04:0,12,138	0/0:12,0:12:33.03:0,33,349	0/0:7,0:7:9.03:0,9,104	0/0:20,0:20:54.14:0,54,611	0/0:22,0:22:36.66:0,37,528	1/1:12,1:13:30:272,30,0	1/1:3,17:20:47.61:436,48,0	1/1:0,4:4:12.01:110,12,0	1/1:0,8:8:21.01:192,21,0	0/0:4,0:4:6.02:0,6,69	0/0:4,0:4:12.04:0,12,138	0/0:8,0:8:21.06:0,21,242	0/0:18,0:18:53.36:0,53,584	0/0:17,0:18:47.56:0,48,509	1/1:1,16:16:42.02:384,42,0	0/0:11,0:11:27.06:0,27,300
chr10	102390506	.	CT	C	585.35	PASS	AB=0.931;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.072;DP=449;FS=0.676;HRun=9;HaplotypeScore=68.9255;InbreedingCoeff=0.4492;MQ=68.21;MQ0=12;MQRankSum=-2.442;QD=5.09;ReadPosRankSum=-0.066;VQSLOD=0.3803;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.15:0,57,647	0/0:3,0:3:6.02:0,6,69	0/0:41,0:13:2.36:0,2,79	0/1:64,1:23:23.01:23,0,108	0/0:17,0:17:28.44:0,28,468	0/1:8,1:8:9.37:9,0,155	0/0:15,0:15:36.09:0,36,405	0/0:24,0:24:53.81:0,54,571	0/0:11,0:11:27.08:0,27,311	0/0:24,0:24:60.18:0,60,692	0/1:9,1:10:3.40:3,0,217	0/0:8,0:8:24.07:0,24,277	0/0:7,0:7:21.06:0,21,242	0/0:12,0:11:27.06:0,27,301	0/0:8,0:8:15.04:0,15,173	0/0:18,0:18:48.13:0,48,544	0/0:22,0:22:66.20:0,66,761	0/0:16,0:16:45.06:0,45,491	0/0:24,0:24:60.17:0,60,683	0/0:5,0:5:12.04:0,12,138	0/0:7,0:7:12.02:0,12,128	0/0:3,0:3:6.02:0,6,69	0/0:7,0:7:18.05:0,18,208	0/0:8,0:8:24.06:0,24,267	0/0:17,0:17:38.64:0,39,479	1/1:2,17:19:57.03:519,57,0	0/0:16,1:16:11.68:0,12,388	1/1:3,8:11:18.01:165,18,0
chr10	102390554	.	CTT	C	2313.64	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=2.504;DP=453;FS=5.039;HRun=13;HaplotypeScore=68.3928;InbreedingCoeff=0.9493;MQ=76.88;MQ0=7;MQRankSum=-0.145;QD=19.28;ReadPosRankSum=4.091;VQSLOD=3.1333;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:22:54.50:0,55,708	0/0:2,0:2:6.02:0,6,87	0/0:51,0:19:22.78:0,23,239	0/0:49,0:19:8.66:0,9,116	0/0:17,1:18:15.95:0,16,470	1/1:3,9:11:24.02:233,24,0	1/1:1,11:12:21.03:204,21,0	0/0:23,0:24:53.61:0,54,704	1/1:2,7:9:18.01:175,18,0	0/0:15,0:17:33.08:0,33,410	0/0:12,0:14:39.12:0,39,531	0/0:10,0:10:15.05:0,15,204	0/0:8,0:8:18.06:0,18,260	1/1:1,3:5:11.75:99,12,0	1/1:0,10:10:15.01:145,15,0	0/0:19,0:22:53.65:0,54,700	1/1:2,25:27:71.87:674,72,0	0/0:4,0:18:38.97:0,39,391	0/0:19,0:21:50.14:0,50,650	0/0:7,0:7:21.07:0,21,292	0/0:4,0:4:9.03:0,9,130	1/1:0,7:7:21.03:204,21,0	1/1:0,12:13:35.78:332,36,0	1/1:3,6:9:20.98:194,21,0	1/1:2,12:14:29.77:271,30,0	0/0:21,0:22:56.24:0,56,704	0/0:15,0:14:39.11:0,39,545	0/0:7,0:8:24.08:0,24,330
chr10	102391070	.	C	CTTTT	3222.27	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=1.048;DP=377;FS=0.526;HRun=12;HaplotypeScore=102.8483;InbreedingCoeff=0.8131;MQ=70.77;MQ0=1;MQRankSum=-4.879;QD=24.79;ReadPosRankSum=-4.681;VQSLOD=1.4951;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:15:31.56:0,32,415	0/0:8,0:8:11.87:0,12,158	0/0:9,0:8:5.53:0,6,75	0/0:11,0:8:5.44:0,5,33	0/0:13,0:17:15.23:0,15,282	0/0:14,0:14:33:0,33,401	0/0:10,0:11:26.95:0,27,318	1/1:29,3:33:48.08:769,48,0	0/0:11,0:11:23.87:0,24,299	0/0:9,0:12:15.82:0,16,184	0/0:19,0:22:31.69:0,32,367	0/0:17,0:17:32.81:0,33,402	0/0:9,0:11:29.81:0,30,336	0/0:8,0:9:11.73:0,12,124	0/0:14,0:14:23.91:0,24,299	0/0:4,0:5:8.95:0,9,102	0/0:23,0:27:48.84:0,49,545	1/1:1,0:19:27.37:166,27,0	1/1:18,5:25:45.13:745,45,0	1/1:4,1:5:9.03:160,9,0	1/1:6,3:9:15.05:249,15,0	0/0:6,0:6:8.96:0,9,118	0/0:11,0:11:20.81:0,21,256	0/0:7,0:8:4.06:0,4,42	0/0:8,0:8:8.32:0,8,87	0/1:15,0:15:3.38:469,0,3	1/1:11,4:17:36.12:654,36,0	1/1:1,4:6:11.96:202,12,0
chr10	102391096	.	C	CT	2910.37	PASS	AB=0.767;AC=33;AF=0.589;AN=56;BaseQRankSum=1.773;DP=374;FS=1.601;HRun=10;HaplotypeScore=53.1707;InbreedingCoeff=0.7286;MQ=70.40;MQ0=2;MQRankSum=-2.730;QD=12.60;ReadPosRankSum=-1.795;VQSLOD=2.8291;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:14:29:0,29,228	0/0:10,0:10:23.97:0,24,197	0/0:13,0:7:12.79:0,13,72	0/1:14,0:7:3.95:16,0,4	0/0:18,1:19:15.31:0,15,313	1/1:2,1:16:37.45:232,37,0	1/1:3,1:9:14.34:72,14,0	1/1:7,23:30:47.48:682,47,0	1/1:4,0:12:22.92:127,23,0	0/0:7,0:7:20.97:0,21,172	0/0:29,0:29:71.87:0,72,591	0/0:15,0:15:38.94:0,39,316	0/0:9,0:9:17.96:0,18,146	1/1:3,1:9:14.27:72,14,0	1/1:3,1:10:11.53:75,12,0	0/0:7,0:7:17.96:0,18,144	1/1:4,2:27:54.37:294,54,0	0/0:20,0:20:38.88:0,39,317	0/1:11,10:21:49.92:282,0,50	1/1:1,7:8:15.04:160,15,0	1/1:1,2:3:3.01:32,3,0	1/1:1,0:4:5.68:28,6,0	1/1:2,0:12:28.64:148,29,0	1/1:1,1:7:14.40:89,14,0	1/1:1,0:10:19.89:100,20,0	0/1:6,9:15:37.83:252,0,38	1/1:3,12:15:35.88:364,36,0	1/1:7,1:8:9.02:96,9,0
chr10	102391882	.	T	TG	4064.49	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-7.124;DP=381;FS=3.875;HRun=3;HaplotypeScore=51.5464;InbreedingCoeff=0.9566;MQ=81.40;MQ0=0;MQRankSum=-0.483;QD=35.65;ReadPosRankSum=-1.027;VQSLOD=3.7160;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.22:0,72,863	0/0:5,0:5:12.04:0,12,144	0/0:9,0:9:24.06:0,24,272	0/0:20,0:20:49.61:0,50,561	0/0:6,0:6:15.05:0,15,180	0/0:15,0:15:42.13:0,42,503	0/0:18,0:18:54.17:0,54,647	1/1:2,22:24:63.15:829,63,0	0/0:18,0:18:51.16:0,51,609	0/0:15,0:15:39.12:0,39,467	0/0:5,0:5:15.05:0,15,180	0/0:11,0:11:27.08:0,27,320	0/0:8,0:8:24.07:0,24,288	0/0:12,0:12:36.11:0,36,431	0/0:18,0:18:51.16:0,51,611	0/0:8,0:8:21.06:0,21,249	0/0:26,0:26:72.22:0,72,863	0/0:14,0:14:36.04:0,36,401	1/1:2,10:12:33.10:441,33,0	1/1:0,13:13:36.08:482,36,0	1/1:2,33:35:87.29:1216,87,0	0/0:6,0:6:18.06:0,18,216	0/0:5,0:5:15.05:0,15,180	0/0:14,0:14:33.09:0,33,396	0/0:6,0:6:18.06:0,18,216	1/1:2,13:15:6.16:510,6,0	1/1:0,10:10:30.10:420,30,0	1/1:0,5:5:12.04:168,12,0
chr10	102392006	.	GA	G	2624.19	PASS	AB=1.000;AC=50;AF=0.926;AN=54;BaseQRankSum=-3.774;DP=103;FS=28.439;HRun=4;HaplotypeScore=33.9468;InbreedingCoeff=0.1998;MQ=99.56;MQ0=1;MQRankSum=-4.384;QD=28.22;ReadPosRankSum=1.477;VQSLOD=1.5358;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:27.09:348,27,0	./.	0/0:10,0:8:15.54:0,16,199	0/1:11,0:7:14.47:14,0,45	1/1:0,3:3:6.02:78,6,0	1/1:1,5:6:12.04:155,12,0	1/1:0,2:2:6.01:66,6,0	1/1:0,8:8:24.08:311,24,0	1/1:0,2:2:6.02:78,6,0	1/1:0,3:3:9.03:117,9,0	1/1:0,1:1:3.01:39,3,0	1/1:0,2:2:6.02:78,6,0	1/1:0,3:3:9.03:116,9,0	1/1:0,1:1:3.01:39,3,0	1/1:0,3:3:9.03:117,9,0	1/1:1,3:4:12.03:144,12,0	1/1:0,4:4:9.03:116,9,0	1/1:0,3:3:3.01:39,3,0	1/1:0,6:6:18.05:219,18,0	1/1:0,1:1:3.01:39,3,0	1/1:0,6:6:18.06:233,18,0	1/1:0,1:1:3.01:39,3,0	1/1:0,1:1:3.01:39,3,0	1/1:0,1:1:3.01:39,3,0	1/1:1,3:4:9.03:117,9,0	1/1:0,2:2:3.01:39,3,0	0/1:3,0:3:0:0,0,0	1/1:0,3:3:9.03:117,9,0
chr10	102392012	.	TG	T	713.89	PASS	AB=1.000;AC=27;AF=0.675;AN=40;BaseQRankSum=0.072;DP=100;FS=2.381;HRun=2;HaplotypeScore=40.6986;InbreedingCoeff=0.4682;MQ=96.09;MQ0=2;MQRankSum=-3.508;QD=16.22;ReadPosRankSum=1.814;VQSLOD=3.7024;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,7:9:12.03:136,12,0	./.	0/0:17,0:9:10.59:0,11,219	0/0:9,0:5:5.01:0,5,64	./.	1/1:2,2:4:6.02:68,6,0	1/1:1,1:2:3.01:34,3,0	0/0:9,0:9:0.81:0,1,97	./.	1/1:1,2:3:6.02:67,6,0	1/1:0,1:1:3.01:32,3,0	1/1:0,2:2:6.02:68,6,0	1/1:1,2:3:6.02:68,6,0	./.	1/1:1,1:2:5.91:50,6,0	1/1:0,4:4:12.03:136,12,0	1/1:1,3:4:9.02:100,9,0	0/0:2,0:2:3:0,3,26	0/0:5,0:5:12.14:0,12,68	1/1:1,0:1:2.96:19,3,0	0/1:7,0:7:5.72:6,0,39	1/1:0,1:1:3.01:32,3,0	1/1:0,1:1:3.01:34,3,0	./.	./.	./.	./.	0/0:4,0:4:8.98:0,9,73
chr10	102392451	.	G	GGGGGTGGAC	1572.19	PASS	AB=0.700;AC=31;AF=0.969;AN=32;BaseQRankSum=-1.476;DP=47;FS=3.900;HRun=0;HaplotypeScore=15.5087;InbreedingCoeff=-0.1861;MQ=123.55;MQ0=0;MQRankSum=-1.605;QD=39.30;ReadPosRankSum=-0.835;VQSLOD=2.1324;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	1/1:2,2:5:14.86:396,15,0	0/1:4,1:6:19.35:168,0,19	1/1:1,0:1:3.01:67,3,0	./.	1/1:3,0:3:3.01:51,3,0	1/1:1,0:1:3.01:52,3,0	1/1:2,0:2:3.01:49,3,0	./.	./.	1/1:2,0:2:6.02:127,6,0	1/1:2,0:2:3.01:40,3,0	./.	./.	1/1:1,0:1:3.01:59,3,0	1/1:1,0:1:3.01:66,3,0	1/1:2,0:2:2.98:21,3,0	./.	./.	1/1:6,0:6:5.96:44,6,0	1/1:2,0:2:6.02:212,6,0	1/1:1,0:1:3.01:68,3,0	./.	./.	1/1:1,0:1:3.01:52,3,0	1/1:3,0:3:9:183,9,0	./.
chr10	102394949	.	T	TCACACA	1925.86	PASS	AB=0.923;AC=20;AF=0.370;AN=54;BaseQRankSum=0.175;DP=459;FS=6.011;HRun=0;HaplotypeScore=194.8431;InbreedingCoeff=0.4916;MQ=56.95;MQ0=4;MQRankSum=-2.710;QD=9.83;ReadPosRankSum=-0.171;VQSLOD=1.9743;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:32.52:0,33,360	0/0:8,0:8:8.96:0,9,187	./.	0/0:19,0:13:0.47:0,0,1	0/0:20,0:19:31.33:0,31,490	1/1:14,3:16:11.58:349,12,0	1/1:18,0:19:18.02:232,18,0	0/0:17,0:17:14.82:0,15,161	1/1:15,0:15:12.75:221,13,0	0/0:19,0:18:39.24:0,39,542	0/0:8,0:13:6.02:0,6,91	0/0:17,0:18:18.06:0,18,286	0/0:17,0:16:33.01:0,33,516	1/1:4,9:16:9.03:272,9,0	0/1:15,0:15:55.40:91,0,55	0/0:10,0:12:30.10:0,30,471	0/1:3,14:20:23.46:185,0,23	0/1:15,0:15:31.66:141,0,32	0/0:17,0:17:15.37:0,15,201	0/1:9,0:10:2.92:3,0,252	0/0:32,0:32:50.52:0,51,622	1/1:12,0:13:5.78:68,6,0	1/1:16,0:17:17.72:201,18,0	0/1:17,0:17:20.66:124,0,21	1/1:18,0:18:12.04:219,12,0	0/0:10,0:10:4.98:0,5,57	0/0:14,0:14:15.52:0,16,267	0/1:4,0:4:0:0,0,0
chr10	102394982	.	CAG	C	393.47	PASS	AB=0.987;AC=14;AF=0.250;AN=56;BaseQRankSum=8.566;DP=616;FS=2.247;HRun=0;HaplotypeScore=147.6676;InbreedingCoeff=-0.2084;MQ=50.57;MQ0=17;MQRankSum=-1.848;QD=1.55;ReadPosRankSum=-0.977;VQSLOD=2.7196;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:44:41.26:0,41,609	0/0:10,0:10:11.71:0,12,248	0/0:19,0:6:2.11:0,2,42	0/0:33,0:14:11.15:0,11,123	0/0:24,0:22:53.32:0,53,549	0/1:21,0:20:2.86:3,0,176	0/1:16,0:16:63.51:64,0,129	0/0:21,2:23:33.61:0,34,414	0/1:17,0:17:27.37:27,0,97	0/0:26,0:25:55.80:0,56,675	0/1:10,0:9:5.17:5,0,19	0/0:20,0:18:3.67:0,4,283	0/0:26,0:25:16.09:0,16,565	0/0:18,0:18:20.03:0,20,170	0/0:18,0:18:14.96:0,15,150	0/0:21,0:21:7.27:0,7,390	0/0:24,0:24:38.77:0,39,339	0/1:23,0:21:12.90:95,0,13	0/0:27,0:21:56.94:0,57,487	0/1:15,0:14:23.83:24,0,229	0/1:49,0:47:5.92:6,0,845	0/1:17,0:17:42.58:43,0,105	0/1:20,0:19:17.07:17,0,118	0/1:25,0:25:26.55:27,0,102	0/0:27,0:27:3.99:0,4,296	0/1:19,0:19:12.05:186,0,12	0/1:13,3:16:3.41:3,0,309	1/1:6,0:5:0.08:35,0,0
chr10	102395777	.	ATTTCT	A	253.98	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.160;DP=623;FS=1.258;HRun=0;HaplotypeScore=130.8952;InbreedingCoeff=0.8151;MQ=74.56;MQ0=8;MQRankSum=-3.835;QD=14.11;ReadPosRankSum=1.033;VQSLOD=3.3048;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.15:0,63,1377	0/0:11,0:11:27.06:0,27,617	0/0:38,0:19:26.14:0,26,252	0/0:53,0:24:28.73:0,29,228	0/0:27,0:27:69.16:0,69,1484	0/0:18,0:18:32.84:0,33,461	0/0:17,0:17:30.25:0,30,515	0/0:37,0:37:68.98:0,69,974	0/0:15,0:15:39.13:0,39,678	0/0:31,0:31:54.07:0,54,1219	0/0:20,0:20:44.91:0,45,894	0/0:16,0:16:45.12:0,45,1078	0/0:12,0:12:30.10:0,30,734	0/0:12,0:12:29.86:0,30,382	0/0:19,0:19:50.94:0,51,770	0/0:15,0:15:1.65:0,2,541	0/0:31,0:30:75.21:0,75,1134	1/1:8,10:18:21.03:346,21,0	0/0:18,0:18:36.10:0,36,634	0/0:23,0:23:37.39:0,37,877	0/0:19,0:19:45.13:0,45,661	0/0:19,0:19:50.95:0,51,745	0/0:19,0:19:35.82:0,36,496	0/0:24,0:24:57.14:0,57,860	0/0:31,0:30:62.92:0,63,888	0/0:18,0:18:35.31:0,35,364	0/0:21,0:20:42.11:0,42,628	0/0:18,0:17:27.05:0,27,271
chr10	102395796	.	CT	C	4169.12	PASS	AB=0.766;AC=37;AF=0.661;AN=56;BaseQRankSum=5.548;DP=630;FS=2.403;HRun=14;HaplotypeScore=76.8282;InbreedingCoeff=0.6028;MQ=68.24;MQ0=12;MQRankSum=-0.428;QD=9.90;ReadPosRankSum=2.711;VQSLOD=3.4464;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:54:0,54,488	0/1:9,2:11:11.15:11,0,189	0/0:51,0:14:12.99:0,13,118	0/0:60,0:22:10.94:0,11,67	0/1:23,2:28:1.94:2,0,387	1/1:4,11:15:26.72:185,27,0	1/1:4,10:15:33.56:217,34,0	1/1:8,19:30:58.61:372,59,0	1/1:3,14:17:29.70:205,30,0	0/0:23,0:24:39.78:0,40,343	0/1:10,6:17:64.79:65,0,206	0/0:18,0:18:45.45:0,45,405	0/0:13,1:14:18.29:0,18,290	1/1:1,5:9:23.94:141,24,0	1/1:2,18:22:54.64:360,55,0	0/1:10,6:16:56.16:65,0,56	1/1:9,21:32:44.49:366,44,0	0/0:15,0:15:4.84:0,5,61	0/1:7,12:19:14.11:201,0,14	1/1:4,16:25:25.93:274,26,0	1/1:3,14:19:36.79:238,37,0	1/1:8,12:21:10.23:201,10,0	1/1:2,16:21:33.70:201,34,0	1/1:4,15:21:48.68:320,49,0	1/1:6,20:27:55.57:376,56,0	1/1:3,1:21:37.20:119,37,0	1/1:7,11:18:29.68:203,30,0	1/1:2,0:13:16.29:47,16,0
chr10	102396357	.	CTGTCTGTTCACAGTAG	C	27441.48	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=18.948;DP=631;FS=0.000;HRun=0;HaplotypeScore=273.5424;InbreedingCoeff=0.9737;MQ=87.38;MQ0=0;MQRankSum=-18.306;QD=84.70;ReadPosRankSum=0.621;VQSLOD=3.7720;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,9888	0/0:7,0:7:21.07:0,21,1656	0/0:24,0:24:63.22:0,63,4084	0/0:29,0:29:78.22:0,78,4606	0/0:13,0:13:39.13:0,39,2891	1/1:1,20:21:42.14:1987,42,0	1/1:1,25:26:39.13:1793,39,0	1/1:1,18:19:53.75:1057,54,0	1/1:0,24:24:50.97:2411,51,0	0/0:33,0:33:99:0,99,6850	0/0:9,0:9:27.07:0,27,1608	0/0:43,0:43:99:0,123,9287	0/0:37,0:37:99:0,105,6714	1/1:1,24:25:62.96:2951,63,0	1/1:0,22:22:48.16:2270,48,0	0/0:34,0:34:96.32:0,96,6880	1/1:2,21:23:45.15:2057,45,0	0/0:30,0:30:87.26:0,87,6183	1/1:1,12:13:35.73:846,36,0	1/1:2,19:21:45.09:1953,45,0	1/1:0,24:24:24.08:1033,24,0	1/1:0,12:12:36.12:1647,36,0	1/1:1,10:11:27.09:1190,27,0	1/1:1,29:30:27.09:1198,27,0	1/1:0,18:18:33.11:1449,33,0	1/1:1,15:16:42.10:1766,42,0	1/1:0,16:16:35.94:1702,36,0	1/1:0,3:3:3.01:132,3,0
chr10	102396746	.	A	ACTCT	32829.90	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-17.224;DP=768;FS=6.966;HRun=0;HaplotypeScore=103.3849;InbreedingCoeff=0.9994;MQ=75.73;MQ0=0;MQRankSum=-7.304;QD=65.01;ReadPosRankSum=2.868;VQSLOD=7.1371;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:99:0,117,2150	0/0:10,0:10:27.08:0,27,463	0/0:21,0:21:49.71:0,50,875	0/0:19,0:19:34.34:0,34,790	0/0:24,0:24:72.23:0,72,1301	1/1:2,22:24:60.21:1618,60,0	1/1:7,23:31:75.26:1996,75,0	1/1:12,19:33:90.29:2232,90,0	1/1:1,20:20:54.19:1455,54,0	0/0:29,0:29:84.28:0,84,1562	0/0:27,0:27:81.26:0,81,1464	0/0:29,0:29:87.30:0,87,1619	0/0:32,0:32:96.33:0,96,1821	1/1:1,40:42:99:2830,105,0	1/1:5,37:43:87.30:2345,87,0	0/0:31,0:31:90.31:0,90,1660	1/1:1,16:18:39.13:1044,39,0	1/1:3,25:29:72.25:1943,72,0	1/1:5,19:24:63.22:1580,63,0	1/1:2,25:28:75.26:2019,75,0	1/1:1,27:28:63.22:1700,63,0	1/1:1,21:23:57.20:1535,57,0	1/1:2,18:20:51.06:1374,51,0	1/1:8,28:36:75.26:1993,75,0	1/1:1,25:26:69.24:1859,69,0	1/1:6,28:34:27.31:2073,27,0	1/1:4,32:36:96.33:2584,96,0	1/1:0,8:8:24.08:647,24,0
chr10	102397322	.	A	ATG	1323.21	PASS	AB=0.852;AC=14;AF=0.269;AN=52;BaseQRankSum=-4.184;DP=723;FS=22.384;HRun=0;HaplotypeScore=125.0573;InbreedingCoeff=-0.0583;MQ=63.96;MQ0=21;MQRankSum=-0.752;QD=4.21;ReadPosRankSum=2.122;VQSLOD=1.4375;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:34.08:0,34,329	0/0:6,0:6:2.99:0,3,23	./.	./.	0/1:21,0:24:30.20:30,0,50	0/1:23,0:28:22.51:88,0,23	1/1:27,1:27:8.88:84,9,0	0/0:26,0:26:5.53:0,6,36	0/1:16,7:22:31.12:118,0,31	0/1:28,0:29:16.56:17,0,195	0/0:9,0:10:5.74:0,6,30	0/0:31,0:34:44.71:0,45,413	0/0:17,0:22:20.24:0,20,131	0/1:24,3:27:60.81:170,0,61	0/1:19,4:24:23.22:80,0,23	0/0:16,0:19:18.01:0,18,194	0/1:25,11:37:99:315,0,103	0/0:30,0:27:31.42:0,31,177	0/0:20,0:19:6.01:0,6,64	0/0:14,0:14:18.01:0,18,176	0/0:53,0:52:39.85:0,40,358	1/1:12,0:16:3:28,3,0	0/1:12,3:16:3.89:81,0,4	0/1:30,13:43:86.04:354,0,86	0/1:10,2:13:49.66:111,0,50	0/0:22,0:27:9.55:0,10,44	0/0:23,0:24:23.69:0,24,209	0/0:3,0:12:11.36:0,11,56
chr10	102397354	.	GTGT	G	389.68	PASS	AB=0.622;AC=3;AF=0.054;AN=56;BaseQRankSum=6.878;DP=720;FS=5.278;HRun=0;HaplotypeScore=115.1173;InbreedingCoeff=0.5507;MQ=54.61;MQ0=21;MQRankSum=-0.124;QD=10.25;ReadPosRankSum=3.907;VQSLOD=2.8411;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:51:99:0,121,1940	0/0:2,0:2:6.02:0,6,112	0/0:27,0:10:30.09:0,30,360	0/0:27,0:16:17.26:0,17,517	0/0:27,0:27:60.09:0,60,941	0/0:27,0:26:30.99:0,31,567	0/0:30,0:27:63.19:0,63,895	0/0:22,0:22:66.19:0,66,912	0/0:31,0:31:72.24:0,72,1188	0/0:31,0:30:78.91:0,79,1400	0/0:15,0:15:35.88:0,36,455	0/0:30,0:30:84.05:0,84,1445	0/0:19,0:19:53.75:0,54,740	0/0:23,0:23:57.19:0,57,999	0/0:28,0:28:63.21:0,63,1001	0/0:18,0:18:42.03:0,42,733	0/0:33,0:33:83.61:0,84,1416	0/1:11,16:24:96.23:456,0,96	0/0:11,0:10:27.06:0,27,433	0/0:21,0:21:57.19:0,57,936	0/0:51,0:49:99:0,104,1754	0/0:20,0:20:43.86:0,44,586	0/0:22,0:21:51.17:0,51,741	0/0:45,0:45:99:0,106,1796	0/0:19,0:19:39.82:0,40,733	0/0:29,0:28:50.75:0,51,853	0/0:20,0:19:51.83:0,52,942	1/1:10,0:10:9.49:31,9,0
chr10	102397801	.	C	CGTT	5432.72	PASS	AB=0.783;AC=13;AF=0.232;AN=56;BaseQRankSum=-1.275;DP=684;FS=4.591;HRun=0;HaplotypeScore=123.6373;InbreedingCoeff=0.8802;MQ=71.82;MQ0=0;MQRankSum=-0.761;QD=31.77;ReadPosRankSum=-2.132;VQSLOD=4.8702;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1834	0/0:10,0:10:30.09:0,30,512	0/0:27,0:27:69.17:0,69,1129	0/0:20,0:20:48.11:0,48,902	0/0:32,0:31:93.28:0,93,1580	0/0:27,0:27:65.07:0,65,564	0/0:22,0:22:28.22:0,28,362	0/1:26,10:36:7.36:569,0,7	0/0:23,0:23:34.13:0,34,529	0/0:23,0:23:66.20:0,66,1101	0/0:31,0:31:90.21:0,90,1554	0/0:22,0:22:66.21:0,66,1154	0/0:24,0:24:72.23:0,72,1285	0/0:19,0:19:47.42:0,47,403	0/0:30,0:30:57.90:0,58,610	0/0:27,0:27:78.24:0,78,1345	0/0:27,0:27:31.64:0,32,518	0/0:14,0:14:38.15:0,38,335	1/1:2,7:11:11.74:249,12,0	1/1:3,30:37:84.05:1510,84,0	1/1:5,25:33:55.62:1056,56,0	0/0:24,0:24:68.89:0,69,598	0/0:24,0:24:61.18:0,61,519	0/0:17,0:17:38.96:0,39,333	0/0:31,0:31:27.73:0,28,545	1/1:6,16:22:22.57:928,23,0	1/1:4,20:25:46.62:955,47,0	1/1:5,2:7:4.41:166,4,0
chr10	102398834	.	AG	A	19301.47	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-0.335;DP=967;DS;FS=5.838;HRun=1;HaplotypeScore=166.5685;InbreedingCoeff=0.4262;MQ=41.93;MQ0=71;MQRankSum=-1.172;QD=20.02;ReadPosRankSum=2.662;VQSLOD=4.9752;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,53:44:96.32:1342,96,0	1/1:1,7:4:9.03:126,9,0	0/0:3,0:1:3.01:0,3,45	0/1:9,0:5:29.48:29,0,35	1/1:0,22:19:18.06:251,18,0	1/1:0,25:19:39.13:545,39,0	1/1:0,27:16:30.10:419,30,0	1/1:3,41:33:93.31:1289,93,0	1/1:0,28:20:51.17:713,51,0	1/1:0,35:26:75.25:1043,75,0	1/1:0,26:22:33.06:438,33,0	1/1:0,35:29:72.24:1006,72,0	1/1:0,30:25:57.19:797,57,0	1/1:1,29:27:66.22:923,66,0	1/1:0,24:22:48.16:671,48,0	1/1:1,36:29:72.24:1007,72,0	1/1:1,25:14:33.11:461,33,0	1/1:0,27:13:18.06:251,18,0	1/1:0,77:64:99:1697,123,0	1/1:2,43:30:72.24:1011,72,0	1/1:0,184:141:99:1760,143,0	1/1:3,19:11:27.09:376,27,0	1/1:1,23:16:27.07:378,27,0	1/1:0,21:14:30.10:420,30,0	1/1:0,19:14:39.13:545,39,0	1/1:0,41:24:57.19:796,57,0	1/1:0,36:28:63.21:880,63,0	1/1:0,8:6:9.03:126,9,0
chr10	102400176	.	AG	A	1329.61	PASS	AB=1.000;AC=11;AF=0.212;AN=52;BaseQRankSum=10.793;DP=717;FS=10.080;HRun=2;HaplotypeScore=123.0588;InbreedingCoeff=0.9045;MQ=66.53;MQ0=5;MQRankSum=-10.131;QD=12.66;ReadPosRankSum=-2.930;VQSLOD=0.9611;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,135,1978	0/0:9,0:9:24.07:0,24,360	0/0:28,0:23:62.16:0,62,750	0/0:34,0:26:40.20:0,40,645	0/0:22,0:22:66.21:0,66,967	0/0:24,0:24:69.23:0,69,1034	0/0:37,0:37:99:0,105,1571	1/1:12,0:12:27.83:255,28,0	0/0:34,0:34:99:0,102,1515	0/0:40,0:40:99:0,114,1688	0/0:11,0:11:33.11:0,33,489	0/0:36,0:36:99:0,105,1547	0/0:32,0:32:93.31:0,93,1368	0/0:31,0:31:90.26:0,90,1302	0/0:30,0:30:90.29:0,90,1329	0/0:48,0:48:99:0,141,2084	0/0:32,0:32:93.29:0,93,1369	0/1:13,0:13:1.53:2,0,158	1/1:15,2:16:42.77:312,43,0	1/1:13,3:16:6.01:64,6,0	./.	0/0:21,0:21:57.19:0,57,854	0/0:17,0:17:51.17:0,51,746	0/0:50,0:50:99:0,135,2002	0/0:17,0:15:39.11:0,39,545	1/1:15,6:19:47.65:425,48,0	1/1:20,6:25:45.24:438,45,0	./.
chr10	102400177	.	G	GA	2537.54	PASS	AB=0.683;AC=14;AF=0.250;AN=56;BaseQRankSum=7.937;DP=713;FS=8.369;HRun=1;HaplotypeScore=121.3815;InbreedingCoeff=0.8119;MQ=66.90;MQ0=5;MQRankSum=-10.024;QD=22.46;ReadPosRankSum=-3.598;VQSLOD=2.0599;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,135,1850	0/0:9,0:9:24.07:0,24,334	0/0:28,0:23:62.50:0,63,762	0/0:34,0:26:34.29:0,34,605	0/0:22,0:22:66.20:0,66,902	0/0:24,0:24:69.23:0,69,960	0/0:36,0:36:99:0,105,1456	1/1:0,13:13:31.86:423,32,0	0/0:35,0:35:99:0,102,1414	0/0:39,0:39:99:0,114,1572	0/0:11,0:11:33.11:0,33,459	0/0:36,0:36:99:0,105,1446	0/0:31,0:31:93.30:0,93,1280	0/0:31,0:31:90.26:0,90,1227	0/0:30,0:30:90.29:0,90,1243	0/0:47,0:47:99:0,141,1948	0/0:33,0:33:93.28:0,93,1280	0/1:11,2:13:75.44:75,0,173	1/1:5,15:19:51.61:709,52,0	1/1:3,12:15:6.02:85,6,0	1/1:3,3:3:0.47:1,0,0	0/0:21,0:21:57.19:0,57,797	0/0:17,0:17:51.17:0,51,702	0/0:51,0:51:99:0,135,1868	0/0:17,0:15:39.11:0,39,514	1/1:6,14:18:49.96:698,50,0	1/1:7,16:24:51.16:718,51,0	0/1:0,1:1:0:0,0,0
chr10	102400232	.	A	AAAGG	20794.86	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-7.641;DP=698;FS=18.474;HRun=0;HaplotypeScore=115.4127;InbreedingCoeff=0.9776;MQ=58.26;MQ0=7;MQRankSum=-0.242;QD=53.18;ReadPosRankSum=2.747;VQSLOD=5.0730;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,126,2099	0/0:7,0:7:15.04:0,15,235	0/0:48,0:24:41.46:0,41,566	0/0:41,0:18:29.76:0,30,409	0/0:15,0:14:39.08:0,39,620	1/1:8,12:20:54.16:1185,54,0	1/1:21,9:30:72.20:1576,72,0	1/1:19,2:21:13.14:355,13,0	1/1:13,20:33:87.30:2116,87,0	0/0:32,0:32:71.91:0,72,1171	0/0:13,0:13:24.08:0,24,413	0/0:30,0:30:75.19:0,75,1135	0/0:39,0:39:79.26:0,79,1595	1/1:7,20:27:69.24:1722,69,0	1/1:13,13:26:75.21:1669,75,0	0/0:34,0:34:10.47:0,10,1234	1/1:14,18:32:72.74:1757,73,0	1/1:1,14:16:27.09:685,27,0	1/1:10,4:14:23.94:495,24,0	1/1:6,5:11:27.09:633,27,0	1/1:2,16:19:33:684,33,0	1/1:7,12:19:54.13:1274,54,0	1/1:5,10:16:39.12:863,39,0	1/1:17,22:37:93.32:2233,93,0	1/1:14,10:22:32.50:1073,32,0	1/1:8,10:17:24.15:936,24,0	1/1:12,11:22:57.16:1315,57,0	1/1:0,3:3:9.03:223,9,0
chr10	102400242	.	A	AG	2494.63	PASS	AB=0.939;AC=20;AF=0.357;AN=56;BaseQRankSum=15.438;DP=706;FS=9.642;HRun=1;HaplotypeScore=138.5451;InbreedingCoeff=-0.2601;MQ=59.45;MQ0=7;MQRankSum=-3.358;QD=6.33;ReadPosRankSum=7.334;VQSLOD=-0.0499;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,130,1666	0/0:9,0:9:21.05:0,21,246	0/0:58,1:27:71.65:0,72,862	0/0:42,0:16:32.37:0,32,381	0/0:14,0:13:42.13:0,42,533	0/1:18,2:20:32.22:180,0,32	0/1:30,1:31:93.66:265,0,94	0/1:13,0:13:99:106,0,102	0/1:28,4:33:22.89:239,0,23	0/0:27,0:27:74.91:0,75,945	0/0:15,0:15:36.12:0,36,464	0/0:27,0:27:81.26:0,81,1043	0/0:39,0:39:99:0,114,1457	1/1:26,3:29:12.04:206,12,0	0/1:21,4:25:22.05:299,0,22	0/0:32,1:33:65.19:0,65,1076	0/1:32,0:32:23.21:207,0,23	0/1:17,0:17:13.03:57,0,13	0/1:16,1:17:99:107,0,214	0/1:9,1:10:12.66:60,0,13	0/1:21,0:21:26.15:26,0,158	0/1:21,1:22:99:199,0,106	0/1:14,0:14:46.62:47,0,91	0/1:37,1:37:46.47:284,0,46	0/1:18,7:23:99:173,0,184	0/1:21,1:21:62.74:63,0,241	0/1:19,2:20:49.30:127,0,49	1/1:3,0:3:6.09:18,6,0
chr10	102400302	.	A	AG	5629.25	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-6.795;DP=537;FS=13.289;HRun=5;HaplotypeScore=73.8792;InbreedingCoeff=0.8791;MQ=67.48;MQ0=0;MQRankSum=1.739;QD=24.26;ReadPosRankSum=-0.035;VQSLOD=3.1980;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.20:0,90,945	0/0:3,0:3:6.01:0,6,64	0/1:20,0:13:19.53:20,0,60	0/0:35,0:20:12.07:0,12,266	0/0:7,0:7:15.03:0,15,161	1/1:3,15:18:39.13:513,39,0	1/1:4,22:26:48.11:612,48,0	0/0:17,0:16:33.07:0,33,347	1/1:2,18:20:42.10:532,42,0	0/0:22,0:22:54.12:0,54,574	0/0:11,0:11:27.07:0,27,290	0/0:27,0:27:75.18:0,75,804	0/0:19,1:20:20.63:0,21,551	1/1:0,23:23:39.13:513,39,0	1/1:2,20:22:48.16:630,48,0	0/0:28,0:28:75.15:0,75,794	1/1:2,15:17:33.11:434,33,0	0/0:16,0:16:39.10:0,39,419	0/0:16,0:16:33.08:0,33,353	0/0:4,0:4:9.02:0,9,91	0/0:33,0:33:61.84:0,62,720	1/1:2,19:21:39.08:493,39,0	1/1:3,14:17:39.12:506,39,0	1/1:5,26:31:66.12:864,66,0	1/1:1,15:16:39.13:513,39,0	0/0:10,0:10:30.08:0,30,322	0/0:21,0:21:48.10:0,48,507	0/0:3,0:3:6.01:0,6,64
chr10	102400515	.	GAGA	G	69.87	PASS	AB=0.892;AC=4;AF=0.074;AN=54;BaseQRankSum=5.010;DP=367;FS=4.993;HRun=0;HaplotypeScore=69.8411;InbreedingCoeff=-0.0865;MQ=66.50;MQ0=6;MQRankSum=-1.504;QD=1.84;ReadPosRankSum=-1.436;VQSLOD=0.6764;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.24:0,69,1670	0/0:1,0:1:3.01:0,3,53	0/0:31,0:17:19.57:0,20,449	0/0:55,0:27:22.29:0,22,694	0/0:9,0:9:21.07:0,21,453	0/0:20,0:20:48.16:0,48,1120	0/0:22,0:22:66.22:0,66,1470	0/1:14,2:15:75.54:76,0,425	0/0:8,0:8:21.07:0,21,504	0/0:13,0:13:33.11:0,33,737	0/0:3,0:3:9.03:0,9,221	0/0:21,0:21:60.09:0,60,1265	0/0:13,0:13:39.13:0,39,916	0/0:14,0:14:36.11:0,36,806	0/0:19,0:19:54.19:0,54,1279	0/0:12,0:12:36.11:0,36,742	0/0:14,0:14:42.14:0,42,1007	./.	0/1:6,0:4:28.69:29,0,53	0/0:2,0:2:5.88:0,6,50	0/1:12,1:13:30.13:30,0,145	0/0:12,0:12:30.09:0,30,686	0/0:4,0:4:12.04:0,12,280	0/0:15,0:15:42.14:0,42,990	0/0:6,0:6:18.06:0,18,428	0/0:6,0:5:2.65:0,3,42	0/1:2,1:3:12.97:43,0,13	0/0:1,0:1:2.88:0,3,15
chr10	102401328	.	T	TAC	1745.92	PASS	AB=0.983;AC=26;AF=0.464;AN=56;BaseQRankSum=0.719;DP=606;FS=3.294;HRun=0;HaplotypeScore=397.9050;InbreedingCoeff=-0.3751;MQ=51.31;MQ0=17;MQRankSum=-4.093;QD=3.33;ReadPosRankSum=-1.625;VQSLOD=1.0239;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:6.47:96,0,6	0/1:18,0:18:13.44:70,0,13	0/0:19,0:4:11.99:0,12,119	0/0:35,0:17:24.18:0,24,233	0/1:21,0:20:7.81:8,0,58	0/1:12,0:12:32.20:66,0,32	0/1:26,0:24:56.49:91,0,56	0/0:9,0:4:1.51:0,2,34	0/1:25,0:23:20.12:145,0,20	0/1:58,0:55:34.56:35,0,281	0/1:21,0:21:15.31:15,0,58	0/1:20,0:19:13.97:14,0,40	0/1:36,0:36:74.22:152,0,74	1/1:27,0:27:23.40:160,23,0	0/1:40,0:39:77.55:233,0,78	0/1:25,0:25:18.84:19,0,38	0/1:10,0:10:5.84:6,0,6	0/0:1,0:1:3.01:0,3,34	0/1:8,1:5:1.83:108,0,2	0/1:22,1:23:38.43:87,0,38	0/1:14,0:9:0.02:0,0,0	0/1:36,0:36:26.11:26,0,136	0/1:19,0:18:7.59:8,0,11	0/0:16,0:16:3.97:0,4,41	1/1:40,0:40:16.07:208,16,0	0/1:18,2:17:50.88:230,0,51	0/1:8,1:9:13.92:45,0,14	1/1:2,0:2:6.02:78,6,0
chr10	102401338	.	TAC	T	282.59	PASS	AB=0.857;AC=9;AF=0.161;AN=56;BaseQRankSum=1.768;DP=870;FS=10.744;HRun=0;HaplotypeScore=323.4762;InbreedingCoeff=-0.2366;MQ=47.88;MQ0=33;MQRankSum=-1.823;QD=0.86;ReadPosRankSum=-1.761;VQSLOD=0.8483;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,1:21:8.91:0,9,220	0/1:18,0:20:16.91:17,0,209	0/0:27,0:6:12.81:0,13,146	0/0:44,0:16:12.95:0,13,221	0/0:31,0:30:23.80:0,24,357	0/1:19,1:20:61.96:62,0,138	0/1:28,12:37:53.20:53,0,217	0/0:24,0:11:21:0,21,279	0/1:24,14:36:21.98:22,0,135	0/0:73,0:67:99:0,167,2516	0/0:28,0:28:23.92:0,24,361	0/0:25,0:23:2.86:0,3,202	0/0:47,0:47:23.10:0,23,489	0/0:27,12:39:2.61:0,3,145	0/1:39,24:62:62.74:63,0,352	0/0:38,0:37:13.19:0,13,290	0/0:14,2:16:10.73:0,11,110	0/0:3,0:3:3.01:0,3,40	0/0:15,0:9:24.04:0,24,323	0/0:33,0:32:22.65:0,23,366	0/0:22,0:14:5.99:0,6,88	0/1:40,6:47:83.47:83,0,291	0/1:27,0:27:18.96:19,0,157	0/1:19,6:26:34.28:34,0,46	0/1:29,9:45:65.95:66,0,85	0/0:33,0:30:37.42:0,37,771	0/0:16,0:16:20.79:0,21,298	0/0:5,0:5:7.57:0,8,69
chr10	102401408	.	TAC	T	1523.90	PASS	AB=0.868;AC=8;AF=0.143;AN=56;BaseQRankSum=7.531;DP=1494;FS=46.650;HRun=0;HaplotypeScore=522.5129;InbreedingCoeff=0.1759;MQ=41.40;MQ0=65;MQRankSum=-6.984;QD=6.07;ReadPosRankSum=-3.572;VQSLOD=1.4992;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:40:56.39:0,56,1043	0/0:21,0:19:36.04:0,36,501	0/0:39,0:7:13.81:0,14,175	0/0:36,0:10:17.58:0,18,162	0/0:61,0:58:61.08:0,61,929	0/0:47,0:46:83.15:0,83,1309	0/0:52,0:45:45.15:0,45,728	0/1:39,8:27:68.57:424,0,69	0/0:65,0:64:79:0,79,1278	0/0:113,0:98:99:0,229,3273	0/0:52,0:50:48.58:0,49,773	0/0:62,0:59:99:0,119,1941	0/0:83,0:83:99:0,180,2832	0/0:68,0:68:81.20:0,81,1331	0/0:119,0:116:99:0,188,3150	0/0:75,0:69:99:0,101,1759	0/0:40,0:38:72.18:0,72,1132	0/1:6,0:5:20.25:20,0,29	0/1:20,6:13:4.47:239,0,4	0/1:37,9:43:83.83:149,0,84	0/1:44,4:36:27.11:102,0,27	0/0:73,0:72:99:0,105,1665	0/0:56,0:54:78.28:0,78,1200	0/0:60,0:60:99:0,102,1549	0/0:67,0:66:79.47:0,79,1169	0/1:36,14:43:99:381,0,122	1/1:16,12:26:22.27:351,22,0	0/0:9,1:9:9.35:0,9,44
chr10	102401420	.	TAC	T	1143.08	PASS	AB=0.826;AC=7;AF=0.125;AN=56;BaseQRankSum=9.884;DP=1444;FS=50.456;HRun=0;HaplotypeScore=481.4561;InbreedingCoeff=0.3380;MQ=42.96;MQ0=72;MQRankSum=-6.922;QD=6.11;ReadPosRankSum=-1.191;VQSLOD=1.8270;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:42:60.38:0,60,952	0/0:19,0:18:25.96:0,26,426	0/0:24,0:5:3:0,3,28	0/0:29,1:7:3.01:0,3,44	0/0:55,0:52:36.81:0,37,570	0/0:46,0:45:60.18:0,60,1248	0/0:46,0:40:39.09:0,39,614	1/1:41,10:27:3.04:345,3,0	0/0:67,0:67:96.16:0,96,1471	0/0:104,0:90:99:0,135,2306	0/0:47,0:45:32.92:0,33,641	0/0:59,0:57:99:0,108,1652	0/0:84,0:84:99:0,153,2341	0/0:66,0:66:86.97:0,87,1401	0/0:115,0:112:99:0,173,2718	0/0:84,0:78:99:0,114,1900	0/0:45,0:43:78.34:0,78,1231	0/0:6,0:5:5.77:0,6,34	0/1:15,5:11:47.42:128,0,47	0/1:36,6:39:73.63:74,0,310	0/0:49,6:43:6.29:0,6,93	0/0:67,1:67:73.93:0,74,1284	0/0:54,0:52:75.26:0,75,1128	0/0:66,0:66:98.24:0,98,1548	0/0:65,0:63:61.59:0,62,871	0/1:37,12:40:99:364,0,226	1/1:12,13:23:29.98:365,30,0	0/0:7,1:8:15.82:0,16,161
chr10	102401450	.	T	TAC	1314.87	PASS	AB=0.815;AC=8;AF=0.143;AN=56;BaseQRankSum=9.838;DP=1190;FS=6.325;HRun=0;HaplotypeScore=318.4899;InbreedingCoeff=0.2721;MQ=41.62;MQ0=61;MQRankSum=-9.542;QD=9.26;ReadPosRankSum=-2.230;VQSLOD=2.0891;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:59.75:0,60,744	0/0:19,0:18:36.07:0,36,440	0/0:37,0:1:3.01:0,3,39	0/0:51,0:5:12.04:0,12,156	0/0:42,0:39:37.09:0,37,408	0/0:41,0:41:69.11:0,69,846	0/0:40,0:33:23.71:0,24,332	0/1:39,5:22:30.19:298,0,30	0/0:54,0:54:99:0,111,1321	0/0:77,0:67:99:0,116,1701	0/0:33,0:31:21.42:0,21,341	0/0:48,0:47:88.02:0,88,1056	0/0:60,0:60:99:0,114,1421	0/0:49,0:49:93.27:0,93,1189	0/0:74,0:73:99:0,150,1820	0/0:65,0:62:99:0,121,1533	0/0:43,0:42:93.51:0,94,1250	0/0:5,0:4:2.37:0,2,8	0/1:17,3:12:23.90:165,0,24	0/1:16,8:22:30.16:64,0,30	0/0:60,5:56:1.13:0,1,56	0/0:49,0:48:74.66:0,75,808	0/0:37,0:34:50.94:0,51,554	0/0:68,0:68:99:0,117,1485	0/0:57,0:55:56.81:0,57,795	0/1:19,10:24:57.29:521,0,57	1/1:10,12:17:21.43:353,21,0	1/1:1,2:3:3.01:51,3,0
chr10	102401462	.	T	TAC	3548.27	PASS	AB=0.736;AC=13;AF=0.232;AN=56;BaseQRankSum=5.129;DP=1177;FS=32.734;HRun=0;HaplotypeScore=284.2312;InbreedingCoeff=0.6445;MQ=42.16;MQ0=51;MQRankSum=-8.502;QD=15.04;ReadPosRankSum=-6.256;VQSLOD=1.6197;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:32:66.65:0,67,829	0/0:22,0:21:50.79:0,51,569	0/0:38,0:1:2.94:0,3,18	0/0:54,0:6:14.81:0,15,144	0/0:36,0:33:41.44:0,41,418	0/0:38,0:38:96.17:0,96,1153	0/0:39,0:32:36.64:0,37,557	0/1:41,15:34:99:516,0,177	0/0:63,0:63:99:0,154,1838	0/0:69,0:60:99:0,130,1749	0/0:27,0:26:48.19:0,48,579	0/0:41,0:40:86.73:0,87,1050	0/0:52,0:52:88.29:0,88,1382	0/0:49,0:49:99:0,125,1500	0/0:73,0:72:99:0,180,2104	0/0:64,0:61:99:0,136,1644	0/0:47,0:46:99:0,103,1320	1/1:3,4:5:9.03:149,9,0	0/1:11,5:8:11.18:235,0,11	1/1:14,10:22:4.39:422,4,0	0/1:40,40:75:5.80:939,0,6	0/0:47,0:47:94.04:0,94,1027	0/0:31,0:29:41.94:0,42,470	0/0:66,0:66:99:0,129,1632	0/0:51,0:49:99:0,119,1262	1/1:18,10:25:44.82:652,45,0	1/1:6,13:17:22.75:484,23,0	1/1:1,2:3:9.03:151,9,0
chr10	102401486	.	T	TAC	1636.15	PASS	AB=0.979;AC=10;AF=0.179;AN=56;BaseQRankSum=4.201;DP=1121;FS=15.077;HRun=0;HaplotypeScore=262.7599;InbreedingCoeff=0.5138;MQ=45.23;MQ0=29;MQRankSum=-5.573;QD=6.47;ReadPosRankSum=-4.299;VQSLOD=1.3022;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:59.82:0,60,775	0/0:22,0:22:54.16:0,54,682	0/0:44,0:18:50:0,50,572	0/0:48,0:21:44.22:0,44,644	0/0:25,0:25:38.50:0,38,447	0/0:35,0:35:66.21:0,66,848	0/0:45,0:42:68.91:0,69,933	0/1:59,3:48:99:100,0,1119	0/0:52,0:52:99:0,124,1587	0/0:67,0:63:99:0,152,1867	0/0:25,0:25:51.06:0,51,641	0/0:37,0:36:88.48:0,88,1093	0/0:38,0:38:89.70:0,90,1165	0/0:47,0:47:99:0,108,1378	0/0:69,0:68:99:0,150,1905	0/0:58,0:56:99:0,102,1559	0/0:39,0:38:82.14:0,82,1037	1/1:10,0:9:21.06:243,21,0	0/1:24,1:17:99:103,0,196	0/0:22,0:22:44.16:0,44,615	0/1:95,0:91:10.50:11,0,1209	0/0:33,0:33:73.45:0,73,912	0/0:24,0:22:45.13:0,45,562	0/0:60,0:60:99:0,132,1682	0/0:46,0:45:85.20:0,85,1028	1/1:7,25:29:39.58:1047,40,0	0/1:17,0:15:37.72:38,0,260	1/1:1,11:12:15.05:255,15,0
chr10	102402084	.	C	CT	899.60	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.462;DP=584;FS=8.888;HRun=1;HaplotypeScore=66.2868;InbreedingCoeff=0.9913;MQ=89.89;MQ0=0;MQRankSum=-4.423;QD=34.60;ReadPosRankSum=0.338;VQSLOD=2.8249;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.16:0,75,938	0/0:16,0:16:48.16:0,48,623	0/0:31,0:31:93.19:0,93,1104	0/0:21,0:20:54.05:0,54,626	0/0:15,0:15:42.14:0,42,545	0/0:16,0:16:48.11:0,48,591	0/0:15,0:15:45.15:0,45,583	0/0:25,0:25:63.19:0,63,795	0/0:15,0:15:45.15:0,45,584	0/0:30,0:30:84.26:0,84,1069	0/0:15,0:15:45.15:0,45,581	0/0:24,0:24:69.17:0,69,862	0/0:12,0:12:36.12:0,36,465	0/0:27,0:27:81.22:0,81,1032	0/0:19,0:19:51.17:0,51,661	0/0:26,0:26:75.23:0,75,959	0/0:35,0:35:99:0,105,1321	1/1:0,26:26:69.23:994,69,0	0/0:23,0:23:66.19:0,66,831	0/0:25,0:25:66.20:0,66,840	0/0:24,0:24:66.21:0,66,855	0/0:15,0:15:33.11:0,33,428	0/0:15,0:15:42.14:0,42,543	0/0:26,0:26:75.19:0,75,927	0/0:11,0:11:33.11:0,33,428	0/0:16,0:16:45.14:0,45,572	0/0:28,0:28:78.24:0,78,996	0/0:6,0:6:18.05:0,18,219
chr10	102404699	.	G	GTGTT	752.21	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.535;DP=688;FS=0.000;HRun=0;HaplotypeScore=189.4136;InbreedingCoeff=0.5429;MQ=72.66;MQ0=8;MQRankSum=1.294;QD=21.49;ReadPosRankSum=-2.257;VQSLOD=2.6991;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:90.29:0,90,1371	0/0:12,0:12:24.08:0,24,361	0/0:37,0:28:5.93:0,6,63	0/0:41,0:32:5.88:0,6,77	0/0:18,0:19:39.09:0,39,523	0/0:28,0:28:32.61:0,33,318	0/0:30,0:30:27.56:0,28,298	0/0:23,0:22:5.99:0,6,64	0/0:25,0:25:41.78:0,42,386	0/0:30,0:30:45.15:0,45,681	0/0:26,0:26:29.75:0,30,417	1/1:16,16:34:36.12:846,36,0	0/0:25,0:26:51.15:0,51,752	0/0:10,0:10:12.01:0,12,111	0/0:21,0:21:23.63:0,24,280	0/0:26,0:26:54.16:0,54,790	0/0:35,0:35:57.35:0,57,513	0/0:18,0:18:12.01:0,12,111	0/0:14,0:13:15.02:0,15,139	0/0:17,0:17:25.42:0,25,205	0/0:22,0:22:5.50:0,5,37	0/0:19,0:19:19.59:0,20,216	0/0:14,0:14:23.95:0,24,211	0/0:25,0:25:7.33:0,7,369	0/0:21,0:20:25.74:0,26,262	0/0:35,0:35:48.01:0,48,455	0/0:26,0:26:33.53:0,34,352	0/0:8,0:8:3:0,3,28
chr10	102404700	.	TG	T	2702.01	PASS	AB=0.700;AC=16;AF=0.286;AN=56;BaseQRankSum=16.910;DP=694;FS=4.108;HRun=1;HaplotypeScore=137.9705;InbreedingCoeff=-0.3564;MQ=71.24;MQ0=8;MQRankSum=-4.709;QD=7.72;ReadPosRankSum=3.748;VQSLOD=1.2144;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,2140	0/0:13,0:13:39.12:0,39,591	0/0:36,0:27:72.09:0,72,1122	0/0:42,0:31:88.45:0,88,1241	0/0:19,0:19:56.20:0,56,828	0/1:17,11:28:84.36:242,0,84	0/1:18,12:30:91.45:163,0,91	0/0:23,0:22:59.68:0,60,364	0/1:13,12:25:36.35:318,0,36	0/0:31,0:31:93.27:0,93,1409	0/0:26,0:26:75.12:0,75,1160	0/0:35,0:34:81.06:0,81,1002	0/0:26,0:26:77.29:0,77,1189	0/1:6,4:10:11.08:105,0,11	0/1:9,12:21:7.89:261,0,8	0/0:26,0:26:78.27:0,78,1237	0/1:17,20:37:96.31:355,0,96	0/1:13,5:18:45.39:45,0,152	0/1:9,5:13:64.85:75,0,65	0/1:8,9:17:52.79:102,0,53	0/0:21,1:22:37.48:0,37,287	0/1:14,5:19:58.62:129,0,59	0/1:7,7:14:30.31:140,0,30	0/1:10,15:25:9.40:306,0,9	0/1:12,10:21:34.51:200,0,35	0/1:21,15:36:99:177,0,276	0/1:10,15:25:74.93:205,0,75	0/1:7,2:9:37.43:37,0,52
chr10	102404702	.	TTTG	T	3548.33	PASS	AB=0.686;AC=15;AF=0.268;AN=56;BaseQRankSum=17.505;DP=691;FS=4.189;HRun=0;HaplotypeScore=160.4705;InbreedingCoeff=-0.3630;MQ=68.68;MQ0=8;MQRankSum=-4.451;QD=10.56;ReadPosRankSum=6.689;VQSLOD=2.9888;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,2730	0/0:13,0:13:36.12:0,36,730	0/0:34,0:25:59.63:0,60,896	0/0:42,0:31:75.23:0,75,1081	0/0:20,0:20:45.69:0,46,1076	0/1:16,11:27:99:353,0,99	0/1:18,12:30:99:266,0,111	0/0:23,0:22:60.48:0,60,385	0/1:14,12:26:49.98:404,0,50	0/0:31,0:31:90.29:0,90,1622	0/0:25,0:25:72.23:0,72,1261	0/0:35,0:34:78.24:0,78,1179	0/0:28,0:28:72.82:0,73,1548	0/1:4,4:8:19.55:105,0,20	0/1:7,12:19:18.27:326,0,18	0/0:26,0:26:78.26:0,78,1534	0/1:18,20:38:99:549,0,112	0/1:13,0:18:11.85:12,0,179	0/1:8,0:12:41.21:41,0,77	0/1:8,0:17:62.80:84,0,63	0/0:21,0:22:36.50:0,37,312	0/1:14,5:19:64.31:215,0,64	0/1:6,7:13:39.26:196,0,39	0/1:11,15:26:14.60:447,0,15	0/1:12,10:21:42.40:302,0,42	0/1:22,0:37:99:114,0,328	0/1:8,0:23:92.90:135,0,93	0/0:7,0:9:5.09:0,5,75
chr10	102404711	.	TTG	T	1243.05	PASS	AB=0.955;AC=13;AF=0.232;AN=56;BaseQRankSum=17.918;DP=693;FS=0.313;HRun=0;HaplotypeScore=152.9522;InbreedingCoeff=-0.3429;MQ=59.27;MQ0=11;MQRankSum=-3.389;QD=4.06;ReadPosRankSum=9.139;VQSLOD=1.8729;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,2461	0/0:11,0:11:30.10:0,30,569	0/0:31,0:22:10.71:0,11,759	0/0:40,0:27:81.17:0,81,1142	0/0:20,0:20:53.83:0,54,998	0/0:27,0:27:0.88:0,1,405	0/0:30,0:30:2.50:0,2,389	0/1:18,8:22:99:167,0,579	0/1:23,0:23:21.74:22,0,261	0/0:31,0:31:93.32:0,93,1548	0/0:27,0:27:77.91:0,78,1231	0/0:33,0:32:75.23:0,75,1029	0/0:29,0:29:80.90:0,81,1413	0/0:9,0:9:2.17:0,2,145	0/1:21,0:21:7.85:8,0,264	0/0:25,0:25:75.24:0,75,1301	0/1:36,0:36:37.87:38,0,312	0/1:15,4:19:99:206,0,263	0/1:14,0:12:99:126,0,201	0/1:15,4:19:99:346,0,119	0/1:20,0:20:10.91:11,0,481	0/0:19,0:19:4.18:0,4,327	0/1:16,0:16:5.50:5,0,255	0/1:30,0:30:21.20:21,0,294	0/1:23,0:22:7.49:7,0,267	0/1:36,0:36:40.79:41,0,623	0/1:23,0:23:99:388,0,187	0/0:8,0:8:2.54:0,3,153
chr10	102406860	.	T	TACATACACAC	5554.78	PASS	AB=0.959;AC=24;AF=0.429;AN=56;BaseQRankSum=2.492;DP=563;FS=1.892;HRun=0;HaplotypeScore=204.0501;InbreedingCoeff=0.2489;MQ=65.04;MQ0=11;MQRankSum=-8.380;QD=17.25;ReadPosRankSum=-4.664;VQSLOD=3.0875;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:86.90:0,87,1452	0/0:9,0:9:24.49:0,24,410	0/0:33,0:23:56.98:0,57,575	0/0:35,0:25:59.74:0,60,596	0/0:23,0:24:66:0,66,1327	0/1:22,0:20:45.94:76,0,46	0/1:15,0:14:40.89:56,0,41	1/1:42,0:38:99:1614,106,0	0/1:24,0:23:90.55:91,0,117	0/0:17,0:20:53.84:0,54,849	0/0:12,0:12:30.06:0,30,561	0/0:20,0:20:48.05:0,48,1007	0/0:19,0:28:74.76:0,75,1351	0/1:11,0:13:96.77:170,0,97	0/1:20,0:23:39.90:104,0,40	0/0:15,0:15:45.07:0,45,986	0/1:27,0:26:75.29:412,0,75	1/1:7,0:8:18.04:410,18,0	0/1:13,0:13:13.13:321,0,13	1/1:15,0:14:17.91:207,18,0	1/1:15,0:15:11.97:97,12,0	0/0:12,0:11:5.99:0,6,50	0/1:17,0:18:81.92:99,0,82	0/1:18,0:18:75.09:75,0,78	0/1:21,0:21:86.95:87,0,103	1/1:7,15:23:53.89:1114,54,0	1/1:18,0:18:35.86:515,36,0	1/1:4,0:4:11.90:108,12,0
chr10	102412836	.	CAG	C	394.38	PASS	AB=0.935;AC=19;AF=0.352;AN=54;BaseQRankSum=4.215;DP=659;FS=2.264;HRun=0;HaplotypeScore=78.1108;InbreedingCoeff=-0.0985;MQ=70.46;MQ0=6;MQRankSum=-0.078;QD=1.13;ReadPosRankSum=2.226;VQSLOD=1.2518;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:34:12.01:0,12,122	0/0:10,0:10:5.98:0,6,65	./.	0/0:46,0:23:0:0,0,0	0/1:28,3:30:34.98:35,0,280	0/1:20,0:20:22.75:23,0,129	0/1:21,4:25:38.13:38,0,194	0/0:26,0:26:11.94:0,12,100	0/1:16,1:18:22.79:23,0,322	0/1:19,0:19:23.03:23,0,179	0/0:15,0:15:12.01:0,12,136	0/1:15,4:19:99:103,0,152	0/1:26,1:28:53.77:54,0,557	0/1:22,0:22:34.99:35,0,221	0/1:26,3:29:2.46:2,0,307	0/0:30,0:30:29.54:0,30,365	0/1:20,1:21:31.65:32,0,96	1/1:9,0:12:5.68:28,6,0	0/0:16,0:16:9.01:0,9,83	0/1:28,0:28:14.45:14,0,150	0/0:16,0:16:21.02:0,21,230	0/0:24,0:24:23.42:0,23,288	0/1:12,0:13:8.15:8,0,18	0/1:30,1:31:27.11:27,0,348	0/0:12,0:12:12.02:0,12,154	1/1:10,0:17:14.16:69,14,0	0/0:19,0:37:18.86:0,19,252	1/1:12,0:14:8.52:42,9,0
chr10	102415428	.	AGTGTGT	A	7098.36	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=6.403;DP=711;FS=3.486;HRun=0;HaplotypeScore=159.0652;InbreedingCoeff=0.9626;MQ=59.75;MQ0=6;MQRankSum=-12.828;QD=24.91;ReadPosRankSum=1.720;VQSLOD=4.2431;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:35:75.17:0,75,1978	0/0:14,0:14:33.08:0,33,810	0/0:21,0:10:6.01:0,6,123	0/0:31,0:16:20.98:0,21,380	0/0:21,0:22:39.60:0,40,1154	1/1:4,17:21:27.09:510,27,0	1/1:8,16:25:10.91:529,11,0	0/0:32,0:37:56.95:0,57,474	1/1:11,14:26:29.95:582,30,0	0/0:42,0:43:99:0,101,2481	0/0:23,0:24:57.18:0,57,1731	0/0:22,0:22:57.62:0,58,1620	0/0:24,0:24:51.17:0,51,1383	1/1:11,21:33:25.11:779,25,0	1/1:13,22:35:48.15:875,48,0	0/0:38,0:38:43.56:0,44,2419	1/1:8,18:25:27.09:569,27,0	0/0:11,0:25:33.08:0,33,398	0/0:14,0:16:16.12:0,16,107	0/0:8,0:22:38.70:0,39,230	0/0:17,0:27:46.63:0,47,372	1/1:2,14:16:21.07:425,21,0	1/1:9,9:18:12.04:194,12,0	1/1:9,14:22:21.07:338,21,0	1/1:6,15:22:33.11:638,33,0	1/1:6,25:33:81.22:1498,81,0	0/0:13,0:21:19.99:0,20,70	1/1:1,6:7:9.03:161,9,0
chr10	102415457	.	ATG	A	1985.61	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.972;DP=749;FS=3.038;HRun=0;HaplotypeScore=140.9215;InbreedingCoeff=0.9681;MQ=53.90;MQ0=11;MQRankSum=2.686;QD=17.12;ReadPosRankSum=0.813;VQSLOD=3.9072;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,103,1604	0/0:15,0:15:36.12:0,36,579	0/0:33,0:13:29.74:0,30,406	0/0:40,0:16:29.91:0,30,516	0/0:30,0:30:69.02:0,69,1058	0/0:20,1:21:33.78:0,34,308	0/0:35,0:35:63.78:0,64,700	1/1:13,14:27:42.13:518,42,0	0/0:24,0:24:42.71:0,43,399	0/0:40,0:40:87.25:0,87,1359	0/0:21,0:21:60.20:0,60,965	0/0:23,0:23:54.18:0,54,890	0/0:25,0:25:14.56:0,15,719	0/0:33,0:33:59.69:0,60,548	0/0:31,0:31:48.24:0,48,432	0/0:38,0:38:52.19:0,52,1364	0/0:29,0:28:9.25:0,9,302	0/0:19,0:18:32.45:0,32,225	1/1:3,14:17:42.13:518,42,0	1/1:3,18:20:36.01:406,36,0	1/1:7,21:28:30.09:363,30,0	0/0:23,0:23:44.32:0,44,494	0/0:15,0:15:20.06:0,20,246	0/0:28,0:27:10.77:0,11,216	0/0:24,0:23:42.37:0,42,377	0/0:34,0:34:81.50:0,82,611	1/1:4,19:23:30.09:356,30,0	0/0:9,0:9:14.45:0,14,163
chr10	102417845	.	GTT	G	8911.75	PASS	AB=0.962;AC=37;AF=0.661;AN=56;BaseQRankSum=13.735;DP=566;FS=3.956;HRun=12;HaplotypeScore=146.5518;InbreedingCoeff=0.9213;MQ=66.42;MQ0=2;MQRankSum=-9.165;QD=22.62;ReadPosRankSum=4.020;VQSLOD=3.2506;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:27:57.33:0,57,811	0/0:9,0:10:30.09:0,30,420	0/1:24,0:18:7.47:7,0,224	0/0:16,0:13:15.96:0,16,129	0/0:13,0:13:30.97:0,31,398	1/1:5,12:17:45.08:453,45,0	1/1:8,15:23:63.10:624,63,0	1/1:9,12:25:60.03:591,60,0	1/1:5,12:17:42.07:423,42,0	0/0:22,0:26:58.98:0,59,715	0/0:17,0:19:46.97:0,47,569	0/0:16,0:16:26.58:0,27,460	0/0:22,0:23:49.31:0,49,573	1/1:1,16:17:51.10:517,51,0	1/1:6,21:26:66.11:667,66,0	0/0:19,0:20:56.61:0,57,699	1/1:11,12:24:50.58:490,51,0	1/1:1,0:15:24.47:78,24,0	1/1:6,9:19:35.72:339,36,0	1/1:6,25:33:83.50:811,84,0	1/1:2,15:18:41.98:411,42,0	1/1:6,13:19:42.06:424,42,0	1/1:8,16:24:66.11:657,66,0	1/1:4,11:14:39.07:389,39,0	1/1:3,11:14:42.08:423,42,0	1/1:9,17:26:29.16:615,29,0	1/1:2,27:30:90.17:902,90,0	1/1:2,4:6:9.02:90,9,0
chr10	102417849	.	T	TG	1120.87	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=6.575;DP=602;FS=2.766;HRun=0;HaplotypeScore=183.5537;InbreedingCoeff=0.9163;MQ=62.38;MQ0=2;MQRankSum=-4.454;QD=8.62;ReadPosRankSum=2.646;VQSLOD=3.4790;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:51.44:0,51,741	0/0:10,0:10:16.25:0,16,361	0/0:26,0:17:40.63:0,41,448	0/0:18,0:15:20.99:0,21,197	0/0:15,0:15:39.97:0,40,467	0/0:18,0:18:52.25:0,52,351	0/0:23,0:23:67.17:0,67,466	1/1:24,4:28:51.51:416,52,0	0/0:17,0:17:49.35:0,49,342	0/0:28,0:28:66.59:0,67,815	0/0:20,0:20:57.09:0,57,651	0/0:17,0:17:51.10:0,51,590	0/0:26,0:25:65.46:0,65,712	0/0:18,0:18:53.44:0,53,367	0/0:30,0:29:83.21:0,83,588	0/0:21,0:21:60.10:0,60,722	0/0:26,0:26:59.18:0,59,409	0/0:18,0:18:50.61:0,51,364	0/1:20,0:20:0.35:134,0,0	1/1:33,1:34:62.64:311,63,0	1/1:18,0:18:38.01:168,38,0	0/0:20,0:20:49.34:0,49,373	0/0:26,0:26:72.01:0,72,474	0/0:17,0:16:45.58:0,46,299	0/0:17,0:17:49.32:0,49,333	0/0:26,0:26:75.48:0,75,554	1/1:29,1:30:55.21:255,55,0	0/0:6,0:6:8.86:0,9,57
chr10	102417852	.	T	TG	2571.15	PASS	AB=0.912;AC=25;AF=0.446;AN=56;BaseQRankSum=3.537;DP=607;FS=6.164;HRun=0;HaplotypeScore=178.6111;InbreedingCoeff=0.1929;MQ=60.45;MQ0=2;MQRankSum=0.486;QD=6.32;ReadPosRankSum=2.530;VQSLOD=3.3049;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:54.22:0,54,735	0/0:11,0:11:29.43:0,29,400	0/1:26,0:17:7.60:8,0,315	0/0:18,0:14:24.07:0,24,232	0/0:18,0:18:48.96:0,49,542	0/1:18,3:21:47.53:48,0,87	1/1:19,4:23:35.33:276,35,0	1/1:29,0:29:69.56:463,70,0	0/1:17,1:18:31.32:67,0,31	0/0:28,0:28:59.71:0,60,767	0/0:21,0:21:60.02:0,60,664	0/0:14,0:14:42.10:0,42,512	0/0:24,0:23:65.29:0,65,707	0/1:18,1:19:31.58:32,0,37	0/1:28,1:28:71.66:78,0,72	0/0:22,0:22:63.09:0,63,748	0/1:21,3:24:46.79:161,0,47	0/0:18,0:18:50.10:0,50,332	1/1:21,0:21:39.30:255,39,0	1/1:34,0:34:57.43:316,57,0	1/1:17,0:17:39.38:181,39,0	0/1:18,1:19:27.12:50,0,27	0/1:22,7:29:33.48:220,0,33	0/1:15,2:16:24.81:93,0,25	0/1:15,3:18:45.37:71,0,45	0/1:24,3:27:62.05:119,0,62	1/1:29,1:30:59.11:295,59,0	1/1:4,2:6:4.09:34,4,0
chr10	102417888	.	G	GTTGT	22014.65	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=3.468;DP=610;FS=0.351;HRun=0;HaplotypeScore=134.2509;InbreedingCoeff=0.9898;MQ=56.32;MQ0=2;MQRankSum=-12.470;QD=54.22;ReadPosRankSum=2.769;VQSLOD=6.2157;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:72.20:0,72,1290	0/0:12,0:12:33.08:0,33,525	0/0:25,0:22:51.17:0,51,910	0/0:21,0:16:27.19:0,27,578	0/0:19,0:19:57.16:0,57,956	1/1:5,20:26:57.20:1449,57,0	1/1:6,16:25:47.99:1145,48,0	1/1:8,24:33:75.23:1773,75,0	1/1:5,15:20:39.13:997,39,0	0/0:24,0:24:72.23:0,72,1259	0/0:22,0:22:57.19:0,57,999	0/0:10,0:10:27.09:0,27,481	0/0:21,0:21:57.16:0,57,954	1/1:2,15:17:51.18:1297,51,0	1/1:2,24:26:66.23:1684,66,0	0/0:20,0:20:57.18:0,57,986	1/1:6,14:21:33.11:829,33,0	1/1:9,4:13:21.04:443,21,0	1/1:8,13:23:45.13:1020,45,0	1/1:8,19:27:69.24:1687,69,0	1/1:9,4:13:21.06:491,21,0	1/1:4,19:24:54.10:1312,54,0	1/1:3,19:27:63.13:1501,63,0	1/1:2,16:18:45.15:1165,45,0	1/1:2,23:24:54.19:1398,54,0	1/1:5,20:25:66.18:1575,66,0	1/1:6,29:35:78.27:2014,78,0	1/1:1,4:4:9.03:234,9,0
chr10	102419170	.	G	GCCT	5479.34	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-11.280;DP=505;FS=3.340;HRun=0;HaplotypeScore=70.2298;InbreedingCoeff=0.9976;MQ=75.80;MQ0=0;MQRankSum=-4.747;QD=57.08;ReadPosRankSum=-2.948;VQSLOD=6.0218;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1745	0/0:10,0:10:27.09:0,27,450	0/0:10,0:10:25.31:0,25,374	0/0:11,0:11:30.10:0,30,480	0/0:22,0:22:60.21:0,60,994	0/0:12,0:12:36.12:0,36,599	0/0:23,0:23:66.23:0,66,1094	1/1:2,18:20:60.16:1182,60,0	0/0:12,0:12:33.11:0,33,549	0/0:18,0:18:54.18:0,54,898	0/0:12,0:12:33.10:0,33,524	0/0:16,0:16:48.16:0,48,799	0/0:12,0:12:36.12:0,36,599	0/0:11,0:11:33.11:0,33,550	0/0:17,0:17:51.17:0,51,850	0/0:9,0:9:24.08:0,24,400	0/0:42,0:42:99:0,120,1935	0/0:34,0:34:99:0,102,1669	1/1:3,15:19:54.18:1174,54,0	1/1:1,15:16:39.05:879,39,0	1/1:2,18:20:48.64:1088,49,0	0/0:15,0:15:45.14:0,45,724	0/0:21,0:21:57.19:0,57,947	0/0:28,0:28:78.25:0,78,1274	0/0:15,0:15:45.15:0,45,748	0/0:15,0:15:45.15:0,45,727	1/1:1,20:21:51.18:1156,51,0	0/0:8,0:8:21.05:0,21,323
chr10	102419457	.	C	CT	686.28	PASS	AB=0.600;AC=9;AF=0.161;AN=56;BaseQRankSum=9.502;DP=440;FS=12.635;HRun=1;HaplotypeScore=62.1619;InbreedingCoeff=0.8052;MQ=80.10;MQ0=0;MQRankSum=-8.753;QD=11.07;ReadPosRankSum=-0.356;VQSLOD=0.2200;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.27:0,93,1257	0/0:8,0:8:21.07:0,21,293	0/0:15,0:14:39.28:0,39,384	0/0:15,0:15:41.78:0,42,505	0/0:14,0:14:39.12:0,39,533	0/0:14,0:14:42.12:0,42,554	0/0:33,0:33:96.24:0,96,1235	1/1:6,6:12:29.30:237,29,0	0/0:16,0:16:42.11:0,42,552	0/0:18,0:18:54.13:0,54,705	0/0:5,0:5:15.05:0,15,206	0/0:15,0:15:45.15:0,45,620	0/0:19,0:19:57.19:0,57,794	0/0:15,0:15:42.13:0,42,570	0/0:16,0:16:48.14:0,48,634	0/0:11,0:11:33.11:0,33,457	0/0:31,0:31:93.27:0,93,1242	0/0:26,0:26:78.25:0,78,1072	0/1:6,12:18:30.42:250,0,30	1/1:1,9:10:21:189,21,0	1/1:9,7:16:6.15:43,6,0	0/0:7,0:7:18.06:0,18,251	0/0:12,0:12:36.12:0,36,501	0/0:23,0:23:63.20:0,63,860	0/0:15,0:15:39.13:0,39,545	0/0:16,0:16:48.14:0,48,639	1/1:2,4:6:17.58:125,18,0	0/0:3,0:3:6.02:0,6,84
chr10	102419463	.	C	CA	566.50	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.970;DP=449;FS=18.294;HRun=0;HaplotypeScore=66.4556;InbreedingCoeff=0.9378;MQ=81.32;MQ0=0;MQRankSum=-8.256;QD=8.46;ReadPosRankSum=-0.304;VQSLOD=1.9901;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:92.96:0,93,1195	0/0:11,0:11:30.06:0,30,383	0/0:15,0:14:39.06:0,39,495	0/0:16,0:16:45.11:0,45,568	0/0:14,0:14:38.92:0,39,510	0/0:15,0:15:45.12:0,45,581	0/0:30,0:30:81.20:0,81,1033	1/1:9,6:15:18.38:189,18,0	0/0:14,0:14:39.11:0,39,506	0/0:16,0:16:48.15:0,48,652	0/0:6,0:6:15.05:0,15,202	0/0:16,0:16:45.14:0,45,610	0/0:19,0:19:57.18:0,57,779	0/0:15,0:15:39.13:0,39,543	0/0:16,0:16:48.10:0,48,632	0/0:13,0:13:39.09:0,39,508	0/0:31,0:31:93.27:0,93,1245	0/0:26,0:26:78.18:0,78,1030	1/1:6,12:18:14.51:205,15,0	1/1:1,9:10:20.94:174,21,0	1/1:9,7:16:6.14:43,6,0	0/0:6,0:6:18.06:0,18,251	0/0:13,0:13:39.11:0,39,511	0/0:21,0:21:60.19:0,60,821	0/0:15,0:15:42.10:0,42,532	0/0:15,0:15:42.11:0,42,547	1/1:3,4:7:19.69:123,20,0	0/0:3,0:3:6.02:0,6,84
chr10	102421269	.	C	CT	3020.12	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-11.238;DP=648;FS=2.859;HRun=9;HaplotypeScore=67.4432;InbreedingCoeff=0.9283;MQ=73.79;MQ0=0;MQRankSum=-0.296;QD=23.41;ReadPosRankSum=-4.146;VQSLOD=2.8266;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:89.89:0,90,766	0/0:14,0:14:38.99:0,39,339	0/0:23,0:20:23.23:0,23,222	0/0:21,0:20:4.91:0,5,148	0/0:26,0:26:71.90:0,72,606	0/0:21,1:22:26.80:0,27,462	0/0:23,0:23:56.96:0,57,495	1/1:4,30:34:67.11:916,67,0	0/0:25,0:26:70.94:0,71,588	0/0:25,0:26:65.01:0,65,551	0/0:21,0:21:50.96:0,51,439	0/0:16,0:17:47.03:0,47,397	0/0:20,0:20:53.98:0,54,469	0/0:16,0:16:41.99:0,42,365	0/0:19,0:19:56.97:0,57,489	0/0:32,0:32:86.93:0,87,744	0/0:36,0:36:99:0,102,869	0/0:19,0:19:50.97:0,51,439	1/1:7,19:27:33.11:595,33,0	1/1:2,29:31:84.19:916,84,0	1/1:2,12:14:27.07:299,27,0	0/0:22,0:22:44.98:0,45,390	0/0:25,0:25:68.73:0,69,576	0/0:13,0:13:16.18:0,16,255	0/0:24,0:24:62.96:0,63,543	0/0:3,0:25:46.44:0,46,153	1/1:4,18:23:3.50:462,4,0	0/0:0,0:17:30.56:0,31,90
chr10	102421644	.	GA	G	4427.07	PASS	AB=0.952;AC=21;AF=0.375;AN=56;BaseQRankSum=12.920;DP=630;FS=5.954;HRun=9;HaplotypeScore=64.5383;InbreedingCoeff=0.9313;MQ=75.05;MQ0=0;MQRankSum=-0.503;QD=19.33;ReadPosRankSum=3.313;VQSLOD=5.3009;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,1486	0/0:9,0:9:27.07:0,27,303	0/1:19,1:20:6.82:7,0,166	0/0:27,0:25:44.15:0,44,437	0/0:41,0:41:99:0,105,1203	1/1:4,10:14:24.01:220,24,0	1/1:3,21:24:57.03:522,57,0	0/0:22,0:22:45.12:0,45,510	1/1:4,14:18:39.02:357,39,0	0/0:17,0:17:45.13:0,45,519	0/0:15,2:17:11.65:0,12,383	0/0:26,0:26:66.20:0,66,761	0/0:16,0:16:42.06:0,42,450	1/1:4,13:17:36.01:329,36,0	1/1:8,19:27:54.02:494,54,0	0/0:28,0:28:72.20:0,72,821	1/1:1,26:27:69.04:632,69,0	0/0:23,0:23:63.19:0,63,727	0/0:29,0:29:72.21:0,72,825	0/0:23,0:23:63.19:0,63,727	0/0:13,0:13:33.08:0,33,370	1/1:3,14:17:36.01:329,36,0	1/1:1,14:15:42.02:384,42,0	1/1:5,18:23:51.02:467,51,0	1/1:1,26:27:75.04:687,75,0	0/0:29,0:29:75.22:0,75,857	0/0:24,0:24:57.17:0,57,658	0/0:11,0:11:33.10:0,33,381
chr10	102423419	.	TC	T	492.46	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.512;DP=460;FS=5.553;HRun=1;HaplotypeScore=45.3283;InbreedingCoeff=0.9879;MQ=80.75;MQ0=0;MQRankSum=0.809;QD=32.83;ReadPosRankSum=1.863;VQSLOD=3.1025;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.19:0,66,1003	0/0:10,0:10:30.10:0,30,475	0/0:16,0:16:48.07:0,48,668	0/0:8,0:8:18.06:0,18,261	0/0:18,0:18:54.18:0,54,863	0/0:22,0:22:66.21:0,66,1031	0/0:17,0:17:51.17:0,51,813	0/0:28,0:28:84.27:0,84,1283	0/0:13,0:13:39.13:0,39,624	0/0:14,0:14:42.14:0,42,665	0/0:15,0:15:36.12:0,36,575	0/0:11,0:11:33.10:0,33,504	0/0:18,0:18:54.17:0,54,838	0/0:11,0:11:33.10:0,33,504	0/0:19,0:19:57.18:0,57,886	0/0:16,0:16:48.15:0,48,745	0/0:25,0:25:75.26:0,75,1182	1/1:0,15:15:42.14:587,42,0	0/0:25,0:25:72.25:0,72,1144	0/0:18,0:18:54.18:0,54,860	0/0:12,0:12:36.11:0,36,551	0/0:12,0:12:30.08:0,30,434	0/0:11,0:11:27.09:0,27,432	0/0:9,0:9:27.09:0,27,429	0/0:21,0:21:63.19:0,63,982	0/0:17,0:17:51.17:0,51,814	0/0:26,0:26:78.25:0,78,1214	0/0:11,0:11:33.11:0,33,527
chr10	102425056	.	C	CTGTTTGTT	9090.49	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-0.249;DP=708;FS=3.766;HRun=0;HaplotypeScore=174.8144;InbreedingCoeff=0.9622;MQ=70.59;MQ0=0;MQRankSum=-10.971;QD=43.92;ReadPosRankSum=-4.412;VQSLOD=3.8948;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,99,2413	0/0:6,0:6:15.05:0,15,359	0/0:34,0:33:39.13:0,39,946	0/0:19,0:18:21.06:0,21,411	0/0:26,0:26:63.20:0,63,1503	0/0:14,0:14:30.09:0,30,716	0/0:30,0:30:69.18:0,69,1657	1/1:32,3:38:45.08:1346,45,0	0/0:17,0:17:36.12:0,36,921	0/0:31,0:31:66.20:0,66,1611	0/0:12,0:12:18.06:0,18,461	0/0:18,0:18:51.14:0,51,1173	0/0:28,0:28:54.18:0,54,1375	0/0:32,0:32:66.23:0,66,1687	0/0:19,0:19:42.13:0,42,1020	0/0:31,0:31:66.21:0,66,1567	0/0:46,0:46:99:0,108,2661	1/1:9,0:27:40.20:323,40,0	1/1:21,6:27:39.09:1403,39,0	1/1:17,14:33:54.10:1948,54,0	1/1:16,0:16:15.03:410,15,0	0/0:16,0:16:21.06:0,21,479	0/0:18,0:18:33.10:0,33,777	0/0:34,0:34:90.30:0,90,2196	0/0:21,0:21:48.15:0,48,1176	1/1:24,13:38:63.03:2257,63,0	1/1:16,7:25:39.07:1279,39,0	1/1:1,1:2:3.01:124,3,0
chr10	102427071	.	A	AG	14180	PASS	AB=0.706;AC=54;AF=0.964;AN=56;BaseQRankSum=-2.569;DP=401;FS=0.000;HRun=0;HaplotypeScore=99.4587;InbreedingCoeff=-0.0414;MQ=87.85;MQ0=0;MQRankSum=-2.476;QD=35.36;ReadPosRankSum=3.678;VQSLOD=4.5085;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:81.27:1153,81,0	1/1:0,2:2:6.02:87,6,0	0/1:7,9:16:12.86:215,0,13	0/1:12,4:17:20.39:299,0,20	1/1:0,10:10:24.08:346,24,0	1/1:0,18:18:48.16:676,48,0	1/1:0,14:14:42.14:603,42,0	1/1:2,15:17:42.10:565,42,0	1/1:0,15:15:42.14:585,42,0	1/1:0,13:13:39.12:545,39,0	1/1:1,7:8:18.06:256,18,0	1/1:1,19:20:51.17:730,51,0	1/1:0,24:24:66.22:940,66,0	1/1:0,14:14:42.14:602,42,0	1/1:0,13:13:39.13:554,39,0	1/1:0,6:6:15.05:216,15,0	1/1:1,23:23:60.20:853,60,0	1/1:0,13:13:36.12:514,36,0	1/1:0,11:11:33.09:460,33,0	1/1:0,9:9:24.04:319,24,0	1/1:0,31:31:78.26:1110,78,0	1/1:0,16:16:39:558,39,0	1/1:0,8:8:24.08:343,24,0	1/1:0,9:9:23.41:340,23,0	1/1:0,10:10:19.98:290,20,0	1/1:0,10:10:27.09:389,27,0	1/1:0,10:10:21.07:291,21,0	1/1:0,9:9:24.08:343,24,0
chr10	102427073	.	A	AG	14591.02	PASS	AB=0.899;AC=54;AF=0.964;AN=56;BaseQRankSum=-3.670;DP=410;FS=0.000;HRun=1;HaplotypeScore=102.6316;InbreedingCoeff=-0.0357;MQ=87.30;MQ0=0;MQRankSum=-3.569;QD=35.59;ReadPosRankSum=2.774;VQSLOD=4.8508;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:81.27:1172,81,0	1/1:2,0:2:6.02:86,6,0	0/1:15,1:16:7.19:207,0,7	0/1:15,3:18:6.30:336,0,6	1/1:10,0:10:24.08:345,24,0	1/1:18,0:18:48.16:683,48,0	1/1:17,0:17:48.15:673,48,0	1/1:16,0:16:45.12:596,45,0	1/1:16,0:16:42.14:607,42,0	1/1:13,0:13:39.13:544,39,0	1/1:9,0:9:18.06:257,18,0	1/1:19,0:19:54.17:763,54,0	1/1:25,0:25:66.22:953,66,0	1/1:15,0:15:42.14:604,42,0	1/1:16,0:16:39.13:564,39,0	1/1:6,0:6:15.05:216,15,0	1/1:23,0:23:63.18:889,63,0	1/1:14,0:14:39.11:542,39,0	1/1:10,0:10:30.08:412,30,0	1/1:10,0:10:26.98:337,27,0	1/1:32,0:32:81.24:1150,81,0	1/1:13,0:13:39.13:562,39,0	1/1:9,0:9:24.08:346,24,0	1/1:11,0:11:27.09:391,27,0	1/1:9,0:9:21.06:287,21,0	1/1:10,0:10:30.10:423,30,0	1/1:9,0:9:21.07:302,21,0	1/1:10,0:10:24.08:346,24,0
chr10	102427456	.	T	TAC	812.67	PASS	AB=0.961;AC=30;AF=0.625;AN=48;BaseQRankSum=2.637;DP=498;FS=10.675;HRun=0;HaplotypeScore=123.1468;InbreedingCoeff=0.2886;MQ=60.99;MQ0=7;MQRankSum=-1.454;QD=2.67;ReadPosRankSum=-1.226;VQSLOD=1.8293;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,1:30:43.44:130,0,43	1/1:5,1:6:3.01:44,3,0	./.	./.	0/0:12,0:11:5.94:0,6,63	1/1:22,0:20:5.94:42,6,0	0/0:31,0:30:0.83:0,1,3	1/1:20,0:19:10.71:49,11,0	0/0:12,0:11:1.25:0,1,3	0/1:16,0:16:10.61:11,0,26	0/0:10,0:10:6.01:0,6,64	0/1:12,2:14:16.11:79,0,16	0/0:18,0:19:24.48:0,24,241	1/1:17,0:17:2.99:23,3,0	./.	0/0:11,0:11:6:0,6,64	0/1:27,0:26:48.53:49,0,55	1/1:22,0:21:15.71:113,16,0	1/1:14,0:14:4.70:47,5,0	1/1:19,0:19:6.02:69,6,0	0/0:23,0:20:2.97:0,3,20	1/1:20,0:18:2.84:14,3,0	1/1:12,0:11:2.98:22,3,0	1/1:23,0:22:8.67:65,9,0	./.	1/1:17,0:17:11.68:77,12,0	1/1:17,0:16:14.62:95,15,0	1/1:7,0:6:6.28:33,6,0
chr10	102427514	.	TG	T	1400.41	PASS	AB=0.823;AC=37;AF=0.685;AN=54;BaseQRankSum=2.173;DP=374;FS=7.058;HRun=12;HaplotypeScore=78.6442;InbreedingCoeff=0.1267;MQ=71.81;MQ0=1;MQRankSum=-0.888;QD=4.27;ReadPosRankSum=4.334;VQSLOD=1.1054;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,1:19:23.96:0,24,212	./.	0/1:26,0:16:3:3,0,114	0/1:33,0:23:7.89:8,0,123	0/1:11,0:11:14.04:14,0,52	0/1:7,9:17:1.51:162,0,2	1/1:10,10:21:25.90:189,26,0	0/1:5,0:12:4.48:8,0,4	1/1:7,2:9:8.93:69,9,0	0/0:8,0:8:0:0,0,0	0/1:6,1:7:17.22:17,0,25	0/1:11,1:12:8.23:8,0,95	0/0:17,0:17:12.41:0,12,97	1/1:7,7:15:13.94:97,14,0	1/1:2,7:9:14.92:116,15,0	0/1:7,1:8:17.22:17,0,25	1/1:6,12:17:26.88:209,27,0	0/1:9,2:11:5.24:5,0,118	0/1:4,0:11:7.28:13,0,7	1/1:2,0:9:10.18:30,10,0	1/1:3,0:13:10.18:30,10,0	1/1:10,3:13:8.94:70,9,0	1/1:4,2:5:4.10:27,4,0	1/1:9,14:24:31.70:237,32,0	0/1:4,5:9:3.08:78,0,3	1/1:5,0:18:26.48:77,26,0	1/1:3,0:9:16.30:48,16,0	1/1:1,0:5:8.15:24,8,0
chr10	102428144	.	ACCTCAG	A	21021.10	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=17.678;DP=655;FS=1.709;HRun=0;HaplotypeScore=153.6750;InbreedingCoeff=0.9973;MQ=78.41;MQ0=0;MQRankSum=-19.450;QD=56.51;ReadPosRankSum=2.544;VQSLOD=5.2675;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,181,6423	0/0:14,0:14:42.14:0,42,1520	0/0:25,0:25:75.25:0,75,2505	0/0:24,0:24:72.25:0,72,2296	0/0:30,0:30:87.29:0,87,3028	1/1:1,22:23:57.20:1402,57,0	1/1:3,21:24:48.16:1131,48,0	1/1:1,24:25:72.23:1599,72,0	1/1:2,21:23:60.21:1470,60,0	0/0:28,0:28:81.28:0,81,2754	0/0:27,0:27:81.26:0,81,2764	0/0:20,0:20:60.21:0,60,2139	0/0:24,0:24:69.24:0,69,2515	1/1:3,29:32:81.28:1988,81,0	1/1:2,27:29:75.26:1809,75,0	0/0:30,0:30:87.30:0,87,3105	1/1:1,17:18:43.03:1025,43,0	1/1:2,10:12:27.09:665,27,0	1/1:3,12:15:36.12:865,36,0	1/1:2,21:23:60.21:1455,60,0	1/1:2,19:21:15.05:369,15,0	1/1:2,18:20:45.15:1102,45,0	1/1:0,25:25:59.91:1471,60,0	1/1:1,18:19:36.12:869,36,0	1/1:1,13:14:36.12:875,36,0	1/1:2,17:19:51.17:1231,51,0	1/1:1,17:18:42.14:1029,42,0	1/1:0,12:12:27.09:665,27,0
chr10	102428569	.	A	AC	10019.78	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-5.056;DP=581;FS=3.820;HRun=6;HaplotypeScore=77.0404;InbreedingCoeff=0.9940;MQ=89.05;MQ0=0;MQRankSum=-6.468;QD=30.55;ReadPosRankSum=1.327;VQSLOD=5.5031;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,147,1491	0/0:12,0:12:30.06:0,30,305	0/0:27,0:27:52.32:0,52,516	0/0:24,0:25:47.26:0,47,415	0/0:19,0:19:51.09:0,51,513	1/1:6,17:23:54.16:666,54,0	1/1:8,17:25:57.17:704,57,0	1/1:3,16:19:51.15:624,51,0	1/1:1,10:11:33.09:402,33,0	0/0:27,0:27:78.17:0,78,791	0/0:22,0:22:60.13:0,60,611	0/0:28,0:28:78.12:0,78,778	0/0:23,0:23:66.15:0,66,673	1/1:6,12:18:48.14:586,48,0	1/1:3,12:15:36.03:432,36,0	0/0:16,0:16:39.07:0,39,391	1/1:4,22:26:75.21:923,75,0	1/1:4,19:22:63.19:776,63,0	1/1:4,10:14:36.11:439,36,0	1/1:5,10:15:30.10:374,30,0	1/1:2,19:21:54.17:678,54,0	1/1:2,19:21:51.05:611,51,0	1/1:7,7:12:18.06:226,18,0	1/1:4,17:21:51.16:641,51,0	1/1:1,16:17:47.97:549,48,0	1/1:6,22:28:38.69:798,39,0	1/1:3,9:12:36.10:440,36,0	1/1:0,5:5:12.04:151,12,0
chr10	102428635	.	C	CT	13191.61	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=17.108;DP=597;FS=1.353;HRun=2;HaplotypeScore=100.4135;InbreedingCoeff=0.9951;MQ=82.71;MQ0=0;MQRankSum=-4.804;QD=37.06;ReadPosRankSum=3.995;VQSLOD=5.0564;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1598	0/0:13,0:13:39.13:0,39,543	0/0:24,0:24:72.23:0,72,979	0/0:20,0:20:54.18:0,54,746	0/0:23,0:23:69.23:0,69,965	1/1:0,38:38:99:1383,102,0	1/1:2,20:22:60.17:813,60,0	1/1:2,11:13:36.11:493,36,0	1/1:0,18:18:51.17:702,51,0	0/0:34,1:35:99:0,102,1362	0/0:21,0:21:63.21:0,63,881	0/0:29,0:29:87.26:0,87,1181	0/0:18,0:18:54.18:0,54,755	1/1:1,20:21:56.08:782,56,0	1/1:1,15:16:44.63:624,45,0	0/0:19,0:19:57.18:0,57,778	1/1:2,24:26:63.21:867,63,0	1/1:2,24:25:66.69:917,67,0	1/1:1,15:16:48.15:660,48,0	1/1:1,23:24:65.24:918,65,0	1/1:1,16:17:48.15:654,48,0	1/1:1,18:19:47.17:649,47,0	1/1:0,17:17:47.99:644,48,0	1/1:1,19:20:48.16:664,48,0	1/1:0,21:21:57.18:779,57,0	1/1:2,20:22:24.23:826,24,0	1/1:1,15:16:48.14:648,48,0	1/1:0,4:4:12.04:167,12,0
chr10	102428861	.	A	AG	7890.45	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=19.349;DP=607;FS=0.000;HRun=1;HaplotypeScore=201.4673;InbreedingCoeff=0.9879;MQ=87.50;MQ0=0;MQRankSum=-18.233;QD=23.84;ReadPosRankSum=0.401;VQSLOD=4.4570;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,166,2130	0/0:6,0:6:18.06:0,18,233	0/0:24,0:24:72.02:0,72,908	0/0:30,0:30:86.47:0,86,1079	0/0:24,0:24:69.22:0,69,896	1/1:11,16:27:62.69:584,63,0	1/1:7,18:25:71.51:671,72,0	1/1:13,15:28:73.16:699,73,0	1/1:8,18:26:71.55:696,72,0	0/0:36,0:36:99:0,102,1313	0/0:17,0:17:48.13:0,48,594	0/0:31,0:31:90.29:0,90,1167	0/0:27,0:27:78.23:0,78,984	1/1:7,20:27:58.82:628,59,0	1/1:6,20:26:62.62:624,63,0	0/0:24,0:24:72.22:0,72,909	1/1:3,8:11:23.03:227,23,0	1/1:3,10:13:28.70:313,29,0	1/1:11,9:20:52.58:458,53,0	1/1:2,14:16:39.44:346,39,0	1/1:7,3:10:17.03:152,17,0	1/1:2,7:9:27.01:259,27,0	1/1:5,16:19:47.32:412,47,0	1/1:4,11:15:30.95:247,31,0	1/1:4,10:14:35.42:350,35,0	1/1:5,21:26:77.29:744,77,0	1/1:3,11:14:42.03:393,42,0	1/1:0,3:3:9.02:87,9,0
chr10	102428862	.	GAGCCTCA	G	779.83	PASS	AB=0.950;AC=12;AF=0.214;AN=56;BaseQRankSum=-1.445;DP=556;FS=2.169;HRun=0;HaplotypeScore=254.4388;InbreedingCoeff=-0.2864;MQ=91.66;MQ0=0;MQRankSum=1.756;QD=4.15;ReadPosRankSum=-7.595;VQSLOD=0.7768;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,175,7014	0/0:6,0:6:18.06:0,18,666	0/0:25,0:25:75.26:0,75,2719	0/0:30,0:30:90.31:0,90,3456	0/0:24,0:24:72.25:0,72,2789	0/1:20,0:20:99:127,0,1021	0/1:21,0:22:75.02:75,0,1256	0/1:17,6:23:99:192,0,1019	0/1:21,0:21:55.97:56,0,1186	0/0:36,0:36:99:0,108,4358	0/0:16,0:16:48.15:0,48,1911	0/0:30,0:30:90.31:0,90,3677	0/0:28,0:28:81.28:0,81,3277	0/0:23,0:23:1.85:0,2,1423	0/0:23,0:23:24.88:0,25,1407	0/0:24,0:24:72.25:0,72,2961	0/1:12,0:12:79.68:80,0,429	0/0:10,0:10:30.05:0,30,619	0/1:9,4:13:99:157,0,452	0/1:14,0:14:56.11:56,0,641	0/1:6,0:6:64.04:78,0,64	0/1:8,0:8:19.67:20,0,447	0/0:16,2:17:27.92:0,28,943	0/1:13,0:13:20.03:20,0,405	0/1:12,0:12:13.82:14,0,712	0/1:21,3:24:56.07:56,0,1235	0/0:12,0:14:42.14:0,42,885	0/0:3,0:3:9.03:0,9,201
chr10	102428863	.	A	ACCCCAAT	31655.80	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=18.644;DP=643;FS=0.934;HRun=0;HaplotypeScore=212.0836;InbreedingCoeff=0.9969;MQ=85.40;MQ0=0;MQRankSum=-18.918;QD=86.49;ReadPosRankSum=-1.247;VQSLOD=5.0958;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,175,4541	0/0:6,0:6:18.04:0,18,443	0/0:24,0:24:72.22:0,72,1779	0/0:30,0:30:90.27:0,90,2317	0/0:24,0:24:72.22:0,72,1843	1/1:5,16:21:60.83:1925,61,0	1/1:12,18:30:84.26:2590,84,0	1/1:22,15:37:99:3200,107,0	1/1:9,18:27:74.45:2415,74,0	0/0:35,0:35:99:0,102,2792	0/0:16,0:16:45.15:0,45,1242	0/0:32,0:32:90.27:0,90,2440	0/0:27,0:27:81.26:0,81,2096	1/1:6,20:26:78.25:2640,78,0	1/1:10,20:30:84.22:2695,84,0	0/0:24,0:24:72.25:0,72,1920	1/1:7,8:15:28.91:859,29,0	1/1:1,10:11:33.11:1225,33,0	1/1:7,9:16:43.98:1316,44,0	1/1:4,14:18:50.83:1465,51,0	1/1:10,3:13:23.10:467,23,0	1/1:3,7:10:27.07:979,27,0	1/1:4,16:19:50.66:1758,51,0	1/1:11,11:22:42.08:1218,42,0	1/1:6,10:16:47.19:1613,47,0	1/1:4,20:25:69.68:2321,70,0	1/1:11,12:23:69.24:2310,69,0	1/1:3,3:6:18.06:660,18,0
chr10	102429147	.	G	GTTGTT	12738.30	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=9.674;DP=807;FS=3.173;HRun=0;HaplotypeScore=235.6864;InbreedingCoeff=0.9793;MQ=64.82;MQ0=2;MQRankSum=-15.312;QD=47.71;ReadPosRankSum=-1.698;VQSLOD=4.1399;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,120,2139	0/0:11,0:11:27.09:0,27,520	0/0:50,0:42:43.74:0,44,947	0/0:58,0:47:30.76:0,31,1002	0/0:30,0:30:75.26:0,75,1389	1/1:9,20:30:81.27:1989,81,0	1/1:15,11:27:51.13:1238,51,0	0/0:36,0:36:69.13:0,69,1077	1/1:15,17:36:84.28:2023,84,0	0/0:34,0:34:90.28:0,90,1606	0/0:15,0:15:27.07:0,27,487	0/0:36,0:36:90.29:0,90,1686	0/0:41,0:41:99:0,108,1966	1/1:18,13:34:84.24:1723,84,0	1/1:16,15:34:29.80:1682,30,0	0/0:30,0:30:66.23:0,66,1241	1/1:11,10:24:42.13:945,42,0	0/0:15,0:14:7.56:0,8,193	0/0:20,0:19:33.07:0,33,486	0/0:27,0:27:63:0,63,982	0/0:25,0:25:51.13:0,51,838	1/1:11,4:16:36.11:733,36,0	1/1:12,6:18:36.06:743,36,0	1/1:21,12:34:51.58:1004,52,0	1/1:6,6:13:30.03:659,30,0	0/0:34,0:33:87.29:0,87,1576	0/0:19,0:18:48.02:0,48,723	0/0:5,0:5:9.03:0,9,173
chr10	102429150	.	GTTTTGTT	G	633.96	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.885;DP=791;FS=3.848;HRun=0;HaplotypeScore=298.0702;InbreedingCoeff=0.9685;MQ=63.62;MQ0=2;MQRankSum=-1.934;QD=57.63;ReadPosRankSum=0.359;VQSLOD=2.8152;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,144,5055	0/0:11,0:11:27.09:0,27,1089	0/0:46,0:39:66.87:0,67,2439	0/0:57,0:43:99:0,102,2647	0/0:30,0:30:87.30:0,87,3151	0/0:29,0:29:87.30:0,87,2680	0/0:27,0:27:78.16:0,78,1993	0/0:38,0:37:99:0,107,3084	0/0:35,0:35:96.29:0,96,2767	0/0:34,0:34:99:0,102,3624	0/0:15,0:15:42.13:0,42,1377	0/0:37,0:37:99:0,111,3883	0/0:40,0:40:99:0,117,4420	0/0:33,0:33:93.31:0,93,2562	0/0:36,0:36:99:0,108,3058	0/0:29,0:29:87.27:0,87,2944	0/0:23,0:23:50.08:0,50,1435	1/1:5,5:10:30.10:728,30,0	0/0:18,0:17:48.12:0,48,1302	0/0:26,0:26:75.26:0,75,2410	0/0:26,0:26:69.16:0,69,2051	0/0:15,0:15:39.12:0,39,1129	0/0:17,0:17:51.16:0,51,1113	0/0:35,0:34:81.70:0,82,1923	0/0:12,0:12:36.12:0,36,1060	0/0:35,0:35:99:0,105,3787	0/0:19,0:18:57.20:0,57,1853	0/0:5,0:5:12.01:0,12,386
chr10	102429152	.	T	TG	118.38	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.714;DP=788;FS=0.000;HRun=0;HaplotypeScore=214.1987;InbreedingCoeff=0.9668;MQ=63.39;MQ0=2;MQRankSum=-3.210;QD=9.11;ReadPosRankSum=-0.191;VQSLOD=3.5115;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,1923	0/0:9,0:9:27.09:0,27,378	0/0:44,0:37:73.63:0,74,1147	0/0:58,0:42:99:0,100,1225	0/0:29,0:29:87.28:0,87,1201	0/0:31,0:31:91.11:0,91,745	0/0:26,0:26:76.44:0,76,679	0/0:40,0:39:99:0,113,1489	0/0:33,0:33:94.71:0,95,841	0/0:35,0:35:99:0,102,1400	0/0:14,0:14:42.13:0,42,571	0/0:37,0:37:99:0,111,1550	0/0:40,0:40:99:0,117,1636	0/0:32,0:32:92.08:0,92,925	0/0:37,0:37:99:0,110,1123	0/0:29,0:29:87.26:0,87,1181	0/0:22,1:23:44.37:0,44,552	1/1:8,5:12:23.79:212,24,0	0/0:18,0:17:48.12:0,48,636	0/0:27,0:27:81.23:0,81,1063	0/0:25,0:25:69.17:0,69,910	0/0:14,0:14:38.60:0,39,398	0/0:17,0:17:50.35:0,50,508	0/0:36,0:35:83.23:0,83,883	0/0:12,0:12:35.27:0,35,309	0/0:36,0:36:99:0,108,1479	0/0:19,0:18:57.18:0,57,769	0/0:4,0:4:12.02:0,12,149
chr10	102429170	.	GTT	G	11956.08	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=17.127;DP=761;FS=9.952;HRun=7;HaplotypeScore=177.7426;InbreedingCoeff=0.9909;MQ=64.72;MQ0=3;MQRankSum=-7.090;QD=27.49;ReadPosRankSum=0.012;VQSLOD=2.9033;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,153,2578	0/0:9,0:9:27.09:0,27,472	0/0:43,0:34:67.90:0,68,1055	0/0:48,0:36:42:0,42,954	0/0:25,0:25:75.25:0,75,1267	1/1:5,28:33:78.09:925,78,0	1/1:9,19:28:50.82:606,51,0	1/1:7,21:27:63.18:789,63,0	1/1:6,27:33:75.22:884,75,0	0/0:32,0:32:93.31:0,93,1562	0/0:15,0:15:42.13:0,42,679	0/0:28,0:28:78.25:0,78,1328	0/0:40,0:40:99:0,114,1880	1/1:6,23:29:59.74:712,60,0	1/1:4,26:30:75.22:905,75,0	0/0:28,0:28:81.25:0,81,1360	1/1:4,21:24:51.15:613,51,0	1/1:1,14:14:33.10:413,33,0	1/1:3,12:15:36.09:437,36,0	1/1:2,29:31:78.24:981,78,0	1/1:1,20:21:57.18:725,57,0	1/1:2,14:16:40.82:499,41,0	1/1:5,11:16:27.07:331,27,0	1/1:5,35:39:55.20:693,55,0	1/1:0,10:10:30.07:335,30,0	1/1:6,33:39:49.84:1194,50,0	1/1:1,22:23:63.20:800,63,0	1/1:0,3:3:9.03:115,9,0
chr10	102429505	.	GAGAA	G	17547.35	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=14.006;DP=644;FS=7.888;HRun=0;HaplotypeScore=125.7149;InbreedingCoeff=0.9973;MQ=76.08;MQ0=1;MQRankSum=-7.205;QD=43.22;ReadPosRankSum=5.315;VQSLOD=4.9187;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,100,2191	0/0:6,0:6:18.05:0,18,411	0/0:26,0:24:62.92:0,63,946	0/0:19,0:17:45.10:0,45,848	0/0:31,0:31:93.23:0,93,2026	1/1:0,24:24:69.19:1324,69,0	1/1:1,20:21:30.10:568,30,0	1/1:1,29:30:81.18:1365,81,0	1/1:0,19:19:42.14:827,42,0	0/0:33,0:33:93.24:0,93,2019	0/0:18,0:18:54.12:0,54,1256	0/0:20,0:20:60.17:0,60,1432	0/0:27,0:27:72.19:0,72,1585	1/1:0,19:19:39.13:727,39,0	1/1:1,20:21:48.12:901,48,0	0/0:24,0:24:69.23:0,69,1782	1/1:0,27:27:47.50:925,48,0	1/1:0,22:23:51.12:968,51,0	1/1:2,24:27:75.11:1264,75,0	1/1:0,33:33:81.14:1482,81,0	1/1:0,21:21:51.12:942,51,0	1/1:0,18:18:48.07:860,48,0	1/1:0,21:21:50.93:1002,51,0	1/1:3,20:23:27.04:493,27,0	1/1:0,15:15:36.08:664,36,0	1/1:0,32:33:99:1655,99,0	1/1:1,24:25:63.01:1224,63,0	1/1:0,6:6:18.06:356,18,0
chr10	102429507	.	GA	G	1635.60	PASS	AB=0.929;AC=38;AF=0.679;AN=56;BaseQRankSum=16.978;DP=636;FS=5.324;HRun=11;HaplotypeScore=145.7551;InbreedingCoeff=0.8523;MQ=73.71;MQ0=1;MQRankSum=-7.231;QD=3.72;ReadPosRankSum=5.179;VQSLOD=0.4147;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,2:35:34.90:0,35,767	0/0:6,0:6:12.03:0,12,128	0/1:22,1:21:11.02:11,0,254	0/0:18,0:16:8.39:0,8,266	0/0:31,0:31:69.17:0,69,729	1/1:24,0:24:48.84:149,49,0	1/1:20,0:20:15.13:53,15,0	1/1:29,0:29:34.69:113,35,0	1/1:19,0:19:31.08:94,31,0	0/0:35,0:35:69.16:0,69,724	0/1:15,2:18:1.34:1,0,382	0/0:18,1:20:29.28:0,29,489	0/0:23,1:26:32.35:0,32,527	1/1:19,0:19:14.55:60,15,0	1/1:20,0:20:33.12:101,33,0	0/0:24,0:25:72.01:0,72,743	1/1:27,0:27:27.05:93,27,0	1/1:23,0:22:38.20:119,38,0	1/1:25,0:25:40.51:132,41,0	1/1:33,0:33:53.26:162,53,0	1/1:22,0:22:26.94:89,27,0	1/1:18,0:18:30.71:93,31,0	1/1:21,0:21:37.72:114,38,0	1/1:20,0:20:17.76:54,18,0	1/1:15,0:15:23.09:69,23,0	1/1:33,0:33:53.32:168,53,0	1/1:25,0:25:39.38:128,39,0	1/1:6,0:6:13.32:41,13,0
chr10	102429750	.	TCTG	T	14543.50	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=17.776;DP=576;FS=2.827;HRun=0;HaplotypeScore=127.7816;InbreedingCoeff=0.9977;MQ=93.80;MQ0=0;MQRankSum=-10.830;QD=41.20;ReadPosRankSum=4.511;VQSLOD=5.8437;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.20:0,57,1265	0/0:7,0:7:21.07:0,21,469	0/0:28,0:28:81.28:0,81,1782	0/0:28,0:28:81.20:0,81,1564	0/0:26,0:26:72.25:0,72,1581	1/1:4,21:25:66.18:1025,66,0	1/1:2,14:16:42.10:657,42,0	1/1:4,19:23:54.18:877,54,0	1/1:1,16:17:48.16:784,48,0	0/0:28,0:28:78.27:0,78,1742	0/0:17,0:17:51.18:0,51,1139	0/0:25,0:25:72.25:0,72,1608	0/0:18,0:18:54.19:0,54,1205	1/1:1,9:10:27.09:441,27,0	1/1:2,19:21:57.11:873,57,0	0/0:27,0:27:78.27:0,78,1743	1/1:2,9:11:27.09:441,27,0	1/1:2,10:12:27.09:440,27,0	1/1:3,13:16:36.11:566,36,0	1/1:2,23:25:60.17:940,60,0	1/1:3,25:28:69.24:1127,69,0	1/1:1,13:14:39.13:637,39,0	1/1:6,16:22:51.17:819,51,0	1/1:1,18:19:39.13:637,39,0	1/1:0,32:32:87.30:1420,87,0	1/1:0,33:33:96.31:1537,96,0	1/1:1,22:23:63.22:1029,63,0	1/1:0,6:6:18.06:294,18,0
chr10	102429814	.	T	TA	4936.67	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=7.234;DP=523;FS=11.386;HRun=9;HaplotypeScore=116.6546;InbreedingCoeff=0.9389;MQ=70.60;MQ0=0;MQRankSum=-6.835;QD=23.51;ReadPosRankSum=1.833;VQSLOD=3.9015;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:56.98:0,57,495	0/0:9,0:9:20.94:0,21,173	0/0:16,0:17:34.97:0,35,282	0/1:14,0:13:1.09:1,0,111	0/0:28,0:28:77.96:0,78,674	1/1:8,20:28:61.12:703,61,0	1/1:3,11:14:36.04:383,36,0	0/0:32,0:32:77.93:0,78,668	1/1:2,16:18:47.96:486,48,0	0/0:24,0:24:59.05:0,59,515	0/0:25,0:25:67.92:0,68,575	0/0:19,0:19:56.99:0,57,495	0/0:12,0:12:10.81:0,11,261	1/1:2,15:17:50.98:519,51,0	1/1:2,15:17:45.12:496,45,0	0/0:18,0:18:47.98:0,48,414	1/1:1,10:11:16.61:315,17,0	1/1:2,16:18:36.10:398,36,0	0/0:26,0:27:74.01:0,74,628	0/0:17,1:18:14.49:0,14,342	0/0:11,0:11:23.90:0,24,199	1/1:5,9:14:12.48:329,12,0	1/1:5,24:29:71.90:733,72,0	1/1:6,7:13:15.04:166,15,0	1/1:6,11:17:39.02:407,39,0	0/0:22,1:23:29.51:0,30,466	0/0:24,0:24:65.91:0,66,561	0/0:5,0:5:15:0,15,130
chr10	102429870	.	GCCTT	G	13069.13	PASS	AB=0.542;AC=35;AF=0.625;AN=56;BaseQRankSum=16.715;DP=485;FS=3.572;HRun=0;HaplotypeScore=121.4103;InbreedingCoeff=0.9167;MQ=70.39;MQ0=0;MQRankSum=-5.956;QD=44.00;ReadPosRankSum=2.839;VQSLOD=5.5038;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.15:0,51,1361	0/0:12,0:12:36.12:0,36,1041	0/0:16,0:16:39.89:0,40,1132	0/0:10,0:10:30.09:0,30,712	0/0:28,0:28:84.29:0,84,2414	1/1:2,25:27:72.23:1293,72,0	1/1:2,6:8:24.05:358,24,0	1/1:4,12:16:36.08:560,36,0	1/1:2,13:15:39.02:665,39,0	0/0:26,0:27:81.28:0,81,2300	0/0:22,0:22:66.22:0,66,1834	0/0:23,0:23:69.22:0,69,1914	0/0:16,0:16:48.15:0,48,1303	1/1:2,9:11:27.09:485,27,0	1/1:2,9:11:30.10:531,30,0	0/0:16,0:16:48.16:0,48,1347	1/1:3,17:20:48.13:829,48,0	1/1:3,20:23:57.17:992,57,0	1/1:5,9:14:30.08:512,30,0	1/1:3,19:22:60.20:1062,60,0	1/1:0,7:7:21.07:377,21,0	1/1:2,15:17:36.12:630,36,0	1/1:4,24:28:69.13:1185,69,0	1/1:3,4:7:12.04:216,12,0	1/1:0,15:15:45.09:756,45,0	0/1:4,22:26:13.81:1141,0,14	1/1:2,24:26:72.25:1263,72,0	1/1:0,4:4:12.04:216,12,0
chr10	102430371	.	CA	C	5929.78	PASS	AB=0.518;AC=13;AF=0.232;AN=56;BaseQRankSum=1.739;DP=801;FS=5.874;HRun=1;HaplotypeScore=133.9092;InbreedingCoeff=0.9028;MQ=89.97;MQ0=0;MQRankSum=-0.931;QD=30.25;ReadPosRankSum=-0.484;VQSLOD=4.1595;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,2179	0/0:12,0:12:36.12:0,36,575	0/0:20,0:20:60.17:0,60,931	0/0:39,0:39:92.49:0,92,1595	0/0:37,0:37:99:0,111,1755	0/0:20,0:20:50.03:0,50,262	0/0:39,0:39:99:0,101,519	1/1:24,0:24:67.12:779,67,0	0/0:27,0:27:63.70:0,64,283	0/0:32,0:32:96.32:0,96,1489	0/0:22,0:22:66.22:0,66,1049	0/0:39,0:39:99:0,117,1866	0/0:26,0:26:78.27:0,78,1244	0/0:27,0:27:71.33:0,71,385	0/0:33,0:33:92.16:0,92,447	0/0:34,0:34:99:0,102,1561	0/0:31,0:31:85.26:0,85,370	0/0:16,0:16:42.73:0,43,223	1/1:1,18:19:54.14:635,54,0	1/1:3,31:34:91.19:1103,91,0	1/1:3,51:54:99:1566,127,0	0/0:28,0:28:77.54:0,78,348	0/0:28,0:28:67.67:0,68,333	0/0:28,0:28:71.59:0,72,349	0/0:21,0:21:56.22:0,56,300	0/1:2,27:29:12.02:819,0,12	1/1:1,26:26:72.19:838,72,0	1/1:0,9:9:15.05:190,15,0
chr10	102430373	.	TG	T	15996.20	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=11.497;DP=798;FS=2.615;HRun=3;HaplotypeScore=98.8502;InbreedingCoeff=0.9415;MQ=90.07;MQ0=0;MQRankSum=-2.821;QD=32.38;ReadPosRankSum=0.937;VQSLOD=4.7637;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,1923	0/0:12,0:12:36.07:0,36,489	0/0:21,0:21:60.20:0,60,864	0/0:38,0:38:99:0,103,1436	0/0:36,0:36:99:0,99,1409	1/1:1,19:20:48.15:595,48,0	1/1:2,36:38:99:1265,102,0	1/1:2,23:25:69.17:790,69,0	1/1:0,27:27:69.22:855,69,0	0/0:30,0:30:87.28:0,87,1235	0/0:21,0:21:60.19:0,60,836	0/0:39,0:39:99:0,114,1634	0/0:28,0:28:84.28:0,84,1194	1/1:2,23:25:29.15:812,29,0	1/1:1,32:33:96.30:1190,96,0	0/0:33,0:33:96.30:0,96,1347	1/1:0,32:32:93.29:1153,93,0	1/1:1,15:16:45.14:558,45,0	1/1:21,0:21:57.57:634,58,0	1/1:35,0:35:96.24:1118,96,0	1/1:53,1:54:99:1649,141,0	1/1:0,28:28:84.26:1041,84,0	1/1:0,27:27:75.23:930,75,0	1/1:1,26:27:72.23:893,72,0	1/1:1,19:20:54.17:669,54,0	0/1:30,0:30:4.36:819,0,4	1/1:27,0:26:72.20:850,72,0	1/1:9,0:9:15.04:175,15,0
chr10	102431006	.	A	AT	631.28	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.736;DP=694;FS=4.033;HRun=8;HaplotypeScore=65.8112;InbreedingCoeff=0.9963;MQ=73.42;MQ0=0;MQRankSum=-1.193;QD=26.30;ReadPosRankSum=1.221;VQSLOD=4.5856;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,156,1414	0/0:13,0:13:33.01:0,33,302	0/0:26,0:25:60:0,60,538	0/0:19,0:19:26.05:0,26,389	0/0:28,0:28:81.01:0,81,731	0/0:20,0:20:54:0,54,489	0/0:24,0:24:60.01:0,60,546	0/0:31,0:31:87.02:0,87,786	0/0:25,0:25:72.02:0,72,656	0/0:21,0:21:63.03:0,63,577	0/0:22,0:22:63.03:0,63,572	0/0:32,0:32:84.04:0,84,769	0/0:31,0:31:78.02:0,78,709	0/0:18,0:18:51.02:0,51,463	0/0:37,0:37:99:0,102,934	0/0:26,0:26:66.01:0,66,599	0/0:30,0:30:83.98:0,84,760	1/1:3,21:24:63.19:726,63,0	0/0:22,0:22:51.02:0,51,464	0/0:30,0:30:75:0,75,675	0/0:19,0:19:48.02:0,48,439	0/0:22,0:22:60.03:0,60,549	0/0:27,0:27:63.02:0,63,577	0/0:15,0:15:42.02:0,42,384	0/0:14,0:14:39.02:0,39,357	0/0:31,0:31:84.02:0,84,766	0/0:23,0:23:60.03:0,60,549	0/0:9,0:9:24.01:0,24,220
chr10	102431162	.	A	AT	6001.44	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-13.241;DP=664;FS=5.145;HRun=6;HaplotypeScore=62.7856;InbreedingCoeff=0.9993;MQ=79.77;MQ0=0;MQRankSum=-0.559;QD=31.59;ReadPosRankSum=-1.252;VQSLOD=4.9499;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,126,1277	0/0:8,0:8:24.05:0,24,245	0/0:24,0:24:35.26:0,35,458	0/0:14,0:15:33.04:0,33,323	0/0:29,0:29:78.11:0,78,771	0/0:17,0:17:45.10:0,45,459	0/0:28,0:28:69.12:0,69,695	1/1:7,30:37:87.25:1058,87,0	0/0:24,0:24:69.16:0,69,703	0/0:22,0:22:57.12:0,57,578	0/0:10,0:10:27.06:0,27,275	0/0:24,0:24:66.12:0,66,661	0/0:23,0:23:63.08:0,63,625	0/0:25,0:25:60.10:0,60,602	0/0:24,0:24:69.14:0,69,696	0/0:18,0:18:51.10:0,51,514	0/0:30,0:30:84.17:0,84,849	0/0:31,0:31:90.20:0,90,918	1/1:1,25:26:70.11:868,70,0	1/1:4,21:25:57.09:680,57,0	1/1:0,28:28:78.25:981,78,0	0/0:14,0:14:36.07:0,36,362	0/0:14,0:14:39.09:0,39,398	0/0:22,0:22:63.11:0,63,629	0/0:26,0:26:72.16:0,72,734	1/1:4,35:39:99:1321,105,0	1/1:1,20:21:48.15:603,48,0	1/1:0,14:14:39.12:490,39,0
chr10	102431472	.	ATATT	A	1562.33	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=3.881;DP=357;FS=15.058;HRun=0;HaplotypeScore=66.7743;InbreedingCoeff=0.6927;MQ=65.32;MQ0=2;MQRankSum=1.169;QD=16.11;ReadPosRankSum=-1.383;VQSLOD=1.5662;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,1:23:14.01:0,14,1045	0/0:6,0:6:9.03:0,9,204	0/0:13,0:10:0.21:0,0,214	0/0:10,0:6:6.01:0,6,99	0/0:20,0:20:36.12:0,36,857	0/0:29,0:29:38.58:0,39,893	0/0:7,0:7:3.01:0,3,74	1/1:17,7:23:18.03:236,18,0	0/0:7,0:7:6.02:0,6,128	0/0:13,0:13:18.06:0,18,441	0/0:18,0:18:27.09:0,27,612	0/0:7,0:7:12.04:0,12,294	0/0:3,0:3:6.02:0,6,115	0/0:7,0:7:9.03:0,9,199	0/0:8,0:8:9.03:0,9,183	0/0:7,0:7:9.03:0,9,221	0/0:22,0:22:33.04:0,33,653	0/0:18,0:18:40.69:0,41,917	1/1:4,10:14:30.05:437,30,0	1/1:9,6:15:11.95:127,12,0	1/1:1,1:2:3.01:50,3,0	0/0:3,0:3:5.98:0,6,93	0/0:6,0:6:3.01:0,3,74	0/0:5,0:5:9.03:0,9,217	0/0:28,0:28:54.16:0,54,1164	1/1:5,14:19:42.14:689,42,0	1/1:6,8:14:9.03:147,9,0	1/1:6,3:8:3.01:50,3,0
chr10	102431498	.	GGTGTGTGTGTGTGT	G	1661.41	PASS	AB=0.715;AC=13;AF=0.283;AN=46;BaseQRankSum=3.880;DP=346;FS=0.000;HRun=0;HaplotypeScore=116.9376;InbreedingCoeff=0.3991;MQ=50.66;MQ0=16;MQRankSum=-3.686;QD=14.70;ReadPosRankSum=0.327;VQSLOD=2.0067;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:20:15.05:0,15,621	0/0:5,0:5:6.02:0,6,327	./.	./.	0/0:16,0:19:27.08:0,27,1392	0/1:11,13:27:18.27:791,0,18	./.	0/0:22,0:20:29.89:0,30,339	0/0:2,0:2:2.98:0,3,22	0/0:15,0:13:24.95:0,25,912	0/0:9,0:16:15.02:0,15,390	0/0:10,0:11:12.03:0,12,474	0/0:4,0:4:10.59:0,11,415	1/1:5,1:6:5.23:105,5,0	1/1:3,9:11:6.49:236,6,0	0/0:9,0:10:16.87:0,17,735	0/1:13,11:23:99:220,0,150	0/0:16,0:20:21.94:0,22,468	0/0:14,0:14:11.37:0,11,139	./.	0/0:9,0:9:2.98:0,3,22	1/1:2,3:4:3.01:38,3,0	./.	1/1:4,0:4:2.82:23,3,0	1/1:12,8:21:9.03:333,9,0	0/0:15,0:17:26.99:0,27,660	0/1:9,0:11:59.61:60,0,101	0/0:4,0:4:3.01:0,3,103
chr10	102431859	.	CTTTTTTTTTTCCTTT	C	3701.95	PASS	AB=0.714;AC=13;AF=0.232;AN=56;BaseQRankSum=2.698;DP=581;FS=2.729;HRun=0;HaplotypeScore=205.7359;InbreedingCoeff=0.8123;MQ=55.67;MQ0=22;MQRankSum=-3.638;QD=32.19;ReadPosRankSum=0.267;VQSLOD=2.9312;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.31:0,90,5431	0/0:6,0:6:18.06:0,18,1016	0/0:82,0:18:27.15:0,27,587	0/0:56,0:7:9.50:0,10,212	0/0:25,0:24:66.23:0,66,3088	0/0:13,0:17:41.94:0,42,1206	0/0:13,0:17:39.05:0,39,1282	1/1:13,16:29:48.05:855,48,0	0/0:7,0:10:12.02:0,12,467	0/0:22,0:21:59.01:0,59,3208	0/0:22,0:21:48.16:0,48,2657	0/0:11,0:11:24.08:0,24,1628	0/0:12,0:12:33.11:0,33,1888	0/0:4,0:11:24.08:0,24,791	0/0:9,0:15:30.04:0,30,890	0/0:17,0:18:45.15:0,45,3048	0/0:16,0:25:57.17:0,57,2364	0/0:13,0:22:45.43:0,45,1084	1/1:17,13:30:41.96:798,42,0	1/1:1,5:6:6.02:189,6,0	1/1:4,6:11:2.96:39,3,0	0/0:8,0:12:30.10:0,30,1260	0/0:12,0:16:33.08:0,33,1283	0/0:9,0:11:14.35:0,14,226	0/0:11,0:15:31.35:0,31,1233	0/1:9,6:15:99:579,0,195	1/1:7,12:19:18.03:744,18,0	1/1:1,4:4:12.04:496,12,0
chr10	102431869	.	TCC	T	2043.24	PASS	AB=0.962;AC=30;AF=0.536;AN=56;BaseQRankSum=10.668;DP=508;FS=3.928;HRun=2;HaplotypeScore=87.9282;InbreedingCoeff=0.5989;MQ=49.96;MQ0=26;MQRankSum=-4.851;QD=9.04;ReadPosRankSum=3.195;VQSLOD=0.9660;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.29:0,93,1356	0/0:6,0:6:17.53:0,18,214	0/0:73,0:12:18.18:0,18,176	0/0:54,0:6:5.86:0,6,66	0/0:27,0:26:72.46:0,72,927	1/1:18,1:18:12.64:217,13,0	1/1:16,1:17:8.95:195,9,0	0/1:18,0:17:19.48:19,0,54	1/1:8,0:7:11.90:96,12,0	0/0:23,0:21:61.32:0,61,808	0/0:21,0:20:57.17:0,57,785	0/0:10,0:10:30.10:0,30,438	0/0:12,0:12:36.11:0,36,504	1/1:9,0:9:12.21:117,12,0	1/1:14,2:15:7.19:184,7,0	0/0:16,0:16:47.32:0,47,625	0/1:18,4:22:14.05:162,0,14	0/1:22,0:20:23.60:153,0,24	1/1:14,0:14:17.55:82,18,0	1/1:5,0:5:5.37:32,5,0	0/0:8,0:8:2.81:0,3,10	1/1:9,2:10:19.77:138,20,0	1/1:14,1:14:28.43:269,28,0	1/1:10,0:8:14.56:93,15,0	1/1:13,2:13:3.99:157,4,0	0/1:8,0:7:27.50:89,0,28	1/1:12,0:12:17.98:147,18,0	1/1:5,0:4:11.99:98,12,0
chr10	102431871	.	CTT	C	2490.84	PASS	AB=0.783;AC=34;AF=0.607;AN=56;BaseQRankSum=10.522;DP=501;FS=1.022;HRun=11;HaplotypeScore=86.0864;InbreedingCoeff=0.6577;MQ=49.93;MQ0=25;MQRankSum=-6.830;QD=10.55;ReadPosRankSum=0.998;VQSLOD=1.9305;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:33:77.69:0,78,1095	0/1:4,1:6:17.39:17,0,132	0/0:68,0:12:12.49:0,12,118	0/0:51,1:6:0:0,0,0	0/0:23,0:24:50.60:0,51,669	1/1:12,6:17:17.56:262,18,0	1/1:9,7:16:29.30:298,29,0	1/1:17,0:17:30.34:137,30,0	1/1:4,4:7:8.74:83,9,0	0/0:23,0:22:39.12:0,39,556	0/0:21,0:21:39.08:0,39,534	0/0:10,0:10:24.08:0,24,369	0/0:12,0:12:24.07:0,24,347	1/1:7,3:10:11.64:93,12,0	1/1:10,6:15:27.05:269,27,0	0/0:15,0:16:45.13:0,45,633	1/1:16,7:23:23.71:225,24,0	1/1:14,5:17:20.67:220,21,0	1/1:14,0:14:35.89:161,36,0	1/1:5,0:5:5.64:26,6,0	1/1:6,2:8:5.75:44,6,0	0/1:6,3:9:1.53:84,0,2	1/1:9,6:14:33.06:331,33,0	0/1:5,5:8:5.78:56,0,6	1/1:10,5:13:17.66:187,18,0	0/1:8,0:7:26.28:60,0,26	1/1:12,0:12:17.04:83,17,0	1/1:5,0:4:11.36:55,11,0
chr10	102432708	.	A	AT	557.52	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.289;DP=634;FS=0.000;HRun=7;HaplotypeScore=72.0497;InbreedingCoeff=0.9594;MQ=75.13;MQ0=0;MQRankSum=-1.302;QD=26.55;ReadPosRankSum=1.444;VQSLOD=4.3303;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:75.08:0,75,717	0/0:8,0:8:24.03:0,24,226	0/0:15,0:15:12.65:0,13,170	0/0:10,0:9:19.22:0,19,165	0/0:22,0:22:48.04:0,48,454	0/0:26,0:26:63.08:0,63,603	0/0:21,0:21:57.09:0,57,550	0/0:30,0:30:57.06:0,57,547	0/0:30,0:30:87.11:0,87,828	0/0:30,0:30:75.10:0,75,720	0/0:18,0:18:24.02:0,24,232	0/0:20,0:20:54.08:0,54,521	0/0:30,0:30:78.11:0,78,752	0/0:30,0:30:87.14:0,87,840	0/0:43,0:43:99:0,111,1061	0/0:32,0:32:90.13:0,90,863	0/0:23,0:23:57.07:0,57,544	1/1:3,18:21:54.17:652,54,0	0/0:9,0:9:24.04:0,24,231	0/0:15,0:15:30.03:0,30,290	0/0:25,0:25:51.06:0,51,492	0/0:26,0:26:54.05:0,54,516	0/0:18,0:18:48.07:0,48,463	0/0:31,0:31:87.13:0,87,840	0/0:21,0:21:39.04:0,39,376	0/0:16,0:16:30.04:0,30,289	0/0:22,0:22:63.02:0,63,586	0/0:8,0:8:24.04:0,24,231
chr10	102433347	.	A	ATTT	5064.14	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=2.243;DP=522;FS=7.413;HRun=8;HaplotypeScore=97.3426;InbreedingCoeff=0.9388;MQ=76.05;MQ0=0;MQRankSum=-2.667;QD=15.21;ReadPosRankSum=-0.521;VQSLOD=1.6652;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:32.94:0,33,407	0/0:10,0:10:18.01:0,18,227	0/0:34,0:20:23.69:0,24,292	0/0:19,0:15:15.70:0,16,211	0/0:17,0:17:13.72:0,14,180	1/1:1,0:13:8.98:72,9,0	1/1:3,0:23:20.69:150,21,0	1/1:4,1:15:36.04:552,36,0	1/1:0,1:13:14.99:170,15,0	0/0:18,0:18:45.12:0,45,564	0/0:12,0:12:14.98:0,15,196	0/0:17,0:17:23.98:0,24,310	0/0:16,0:16:23.99:0,24,314	1/1:4,0:14:11.98:108,12,0	1/1:3,0:19:22.81:154,23,0	0/0:20,0:20:25.24:0,25,474	1/1:4,1:26:24.42:239,24,0	1/1:4,0:18:9.36:55,9,0	1/1:11,2:20:35.85:467,36,0	1/1:5,4:23:52.28:714,52,0	1/1:1,2:14:9.45:123,9,0	1/1:3,0:19:45.15:413,45,0	1/1:2,0:12:11.76:88,12,0	1/1:6,0:26:26.91:210,27,0	1/1:3,0:18:8.97:91,9,0	1/1:7,3:23:14.72:767,15,0	1/1:7,5:27:30.02:443,30,0	1/1:0,1:8:15.05:247,15,0
chr10	102435200	.	A	AAGGGCAT	36820.96	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=5.445;DP=724;FS=7.208;HRun=0;HaplotypeScore=174.7766;InbreedingCoeff=0.9911;MQ=75.61;MQ0=0;MQRankSum=-19.921;QD=85.23;ReadPosRankSum=-1.965;VQSLOD=4.8328;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,114,2768	0/0:9,0:9:24.04:0,24,469	0/0:23,0:23:60.16:0,60,1339	0/0:20,0:20:44.92:0,45,922	0/0:23,0:23:69.24:0,69,1657	1/1:5,13:18:42.14:1539,42,0	1/1:17,17:35:84.29:2973,84,0	1/1:10,17:32:84.25:2618,84,0	1/1:13,21:35:87.30:3144,87,0	0/0:27,0:27:75.26:0,75,1870	0/0:18,0:18:45.15:0,45,1037	0/0:35,0:35:90.31:0,90,2243	0/0:34,0:34:99:0,102,2485	1/1:10,22:33:87.30:3116,87,0	1/1:10,23:33:90.31:3257,90,0	0/0:30,0:30:78.27:0,78,1893	1/1:9,12:22:51.18:1897,51,0	0/0:28,0:28:81.28:0,81,1987	1/1:7,10:18:51.14:1676,51,0	1/1:8,6:15:33.11:1205,33,0	1/1:8,13:24:33.11:1210,33,0	1/1:2,19:25:60.21:2087,60,0	1/1:7,11:18:39.13:1447,39,0	1/1:12,18:31:66.19:2201,66,0	1/1:6,23:29:81.28:2986,81,0	1/1:11,22:34:12.40:3103,12,0	1/1:6,15:24:50.78:1921,51,0	1/1:2,4:6:12.04:442,12,0
chr10	102435744	.	G	GA	4244.82	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-9.877;DP=541;FS=0.000;HRun=0;HaplotypeScore=102.8045;InbreedingCoeff=0.9394;MQ=69.34;MQ0=0;MQRankSum=-0.733;QD=36.59;ReadPosRankSum=-2.283;VQSLOD=3.6828;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1599	0/0:4,0:4:11.96:0,12,128	0/0:8,0:8:22.99:0,23,248	0/0:11,0:11:12.51:0,13,177	0/0:9,0:9:21.46:0,21,262	0/0:22,0:22:66.02:0,66,868	0/0:35,0:35:99:0,105,1403	1/1:0,15:15:42.13:621,42,0	0/0:12,0:12:36.12:0,36,501	0/0:18,0:18:51.16:0,51,669	0/0:9,0:9:27.07:0,27,357	0/0:23,0:23:66.14:0,66,846	0/0:18,0:18:54.18:0,54,741	0/0:25,0:25:75.17:0,75,969	0/0:20,0:20:60.19:0,60,821	0/0:16,0:16:43.02:0,43,572	0/0:38,0:38:99:0,114,1510	0/0:30,0:30:87.19:0,87,1170	1/1:1,16:17:48.11:651,48,0	1/1:1,9:10:24.08:362,24,0	1/1:1,30:31:81.27:1234,81,0	0/0:13,0:13:35.91:0,36,469	0/0:19,0:19:41.77:0,42,492	0/0:37,0:37:99:0,108,1413	0/0:15,0:15:42.13:0,42,569	1/1:2,14:16:0.26:551,0,0	1/1:0,13:13:33.11:505,33,0	1/1:0,14:14:21.07:321,21,0
chr10	102436487	.	GGCA	G	8099.22	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=10.225;DP=638;FS=4.747;HRun=0;HaplotypeScore=106.5639;InbreedingCoeff=0.9985;MQ=82.31;MQ0=0;MQRankSum=-5.424;QD=47.36;ReadPosRankSum=3.293;VQSLOD=6.5758;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:99:0,129,3000	0/0:6,0:6:18.06:0,18,402	0/0:23,0:23:63.22:0,63,1435	0/0:20,0:20:60.21:0,60,1385	0/0:28,0:28:84.27:0,84,1994	1/1:0,25:25:69.24:1286,69,0	1/1:0,17:17:42.14:782,42,0	0/0:33,0:33:99:0,99,2392	1/1:0,11:11:27.09:503,27,0	0/0:31,0:31:93.32:0,93,2279	0/0:13,0:13:39.12:0,39,913	0/0:24,0:24:72.25:0,72,1775	0/0:22,0:22:66.23:0,66,1580	1/1:0,20:20:51.17:946,51,0	1/1:0,22:22:45.15:839,45,0	0/0:27,0:27:78.27:0,78,1923	0/0:25,0:25:72.25:0,72,1775	0/0:18,0:18:54.19:0,54,1302	0/0:23,0:23:57.20:0,57,1402	0/0:32,0:32:96.33:0,96,2364	0/0:26,0:26:78.27:0,78,1869	1/1:0,21:21:63.22:1173,63,0	1/1:0,18:18:44.99:839,45,0	1/1:0,21:21:54.19:1006,54,0	1/1:0,16:16:39.13:726,39,0	0/0:35,0:34:99:0,105,2441	0/0:25,0:25:75.26:0,75,1836	0/0:12,0:12:36.09:0,36,808
chr10	102436634	.	GTACGGGAGGT	G	12290.01	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=16.005;DP=635;FS=2.153;HRun=0;HaplotypeScore=212.8715;InbreedingCoeff=0.9994;MQ=79.84;MQ0=0;MQRankSum=-16.558;QD=79.29;ReadPosRankSum=3.258;VQSLOD=5.0183;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,5687	0/0:11,0:11:30.10:0,30,1540	0/0:30,0:30:90.22:0,90,3742	0/0:21,0:21:63.22:0,63,2894	0/0:26,0:26:78.27:0,78,3684	1/1:0,15:15:39.13:1309,39,0	1/1:0,12:12:27.09:941,27,0	0/0:15,0:15:45.15:0,45,2056	1/1:1,16:17:33.07:1057,33,0	0/0:27,0:27:81.28:0,81,3923	0/0:19,0:19:48.15:0,48,2298	0/0:31,0:31:93.32:0,93,4771	0/0:23,0:23:69.24:0,69,3485	1/1:0,15:15:39.13:1359,39,0	1/1:0,23:23:48.16:1672,48,0	0/0:26,0:26:78.27:0,78,3972	0/0:24,0:24:72.25:0,72,3418	0/0:25,0:24:75.26:0,75,3857	0/0:22,0:22:63.21:0,63,2999	0/0:23,0:23:69.24:0,69,3098	0/0:47,0:47:99:0,141,6765	1/1:0,10:10:24.08:836,24,0	1/1:0,17:17:45.15:1566,45,0	1/1:0,21:21:38.70:1355,39,0	1/1:0,25:25:63.22:2195,63,0	0/0:25,0:25:72.24:0,72,3156	0/0:25,0:25:75.26:0,75,3822	0/0:17,0:17:48.08:0,48,1966
chr10	102436646	.	G	GC	1487.92	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=17.238;DP=633;FS=0.362;HRun=0;HaplotypeScore=145.6817;InbreedingCoeff=0.9986;MQ=81.40;MQ0=0;MQRankSum=-16.931;QD=9.24;ReadPosRankSum=1.748;VQSLOD=3.9954;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,1282	0/0:10,0:10:26.94:0,27,334	0/0:29,0:29:84.24:0,84,1120	0/0:25,0:25:75.20:0,75,1009	0/0:24,0:24:69.22:0,69,946	1/1:15,1:16:38.31:172,38,0	1/1:15,5:20:44.41:373,44,0	0/0:20,0:20:60.17:0,60,793	1/1:18,1:19:33.13:183,33,0	0/0:27,0:27:75.24:0,75,1028	0/0:19,0:19:54.17:0,54,732	0/0:35,0:35:99:0,102,1409	0/0:24,0:24:72.17:0,72,958	1/1:14,0:14:34.55:145,35,0	1/1:21,0:21:42.44:178,42,0	0/0:26,0:26:78.19:0,78,1018	0/0:20,0:20:60.19:0,60,822	0/0:26,0:25:75.21:0,75,1009	0/0:24,0:24:72.22:0,72,972	0/0:20,0:20:57.16:0,57,747	0/0:46,0:46:99:0,138,1859	1/1:12,0:12:18.64:72,19,0	1/1:17,0:17:41.36:189,41,0	1/1:19,0:19:34.18:138,34,0	1/1:23,0:23:55.20:254,55,0	0/0:21,0:21:57.17:0,57,765	0/0:29,0:29:84.25:0,84,1137	0/0:11,0:11:33.11:0,33,461
chr10	102436880	.	G	GC	1452.29	PASS	AB=0.631;AC=11;AF=0.196;AN=56;BaseQRankSum=14.726;DP=716;FS=10.520;HRun=0;HaplotypeScore=127.6638;InbreedingCoeff=0.2214;MQ=83.26;MQ0=0;MQRankSum=-14.270;QD=8.70;ReadPosRankSum=2.904;VQSLOD=3.5388;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1361	0/0:17,0:17:51.15:0,51,680	0/0:31,0:31:90.16:0,90,1150	0/0:26,0:26:74.12:0,74,937	0/0:35,0:35:99:0,105,1468	1/1:4,16:20:36.67:300,37,0	0/1:11,7:18:69.61:105,0,70	0/0:57,0:57:99:0,169,2286	0/1:10,11:21:73.40:153,0,73	0/0:30,0:30:90.30:0,90,1256	0/0:20,0:20:54.17:0,54,736	0/0:25,0:25:75.21:0,75,996	0/0:19,0:19:57.17:0,57,779	1/1:2,19:21:28.18:239,28,0	0/1:7,15:22:28.16:219,0,28	0/0:35,0:35:99:0,105,1412	0/0:31,0:31:90.30:0,90,1254	0/0:29,0:29:84.28:0,84,1174	0/0:23,0:23:69.22:0,69,949	0/0:38,0:38:99:0,111,1472	0/0:19,0:19:57.18:0,57,781	0/1:6,8:14:35.10:104,0,35	0/1:6,8:14:29.18:101,0,29	0/1:5,12:17:20.68:149,0,21	0/1:6,14:20:11.23:244,0,11	0/0:30,0:30:84.27:0,84,1160	0/0:38,0:38:99:0,111,1546	0/0:13,0:13:39.13:0,39,545
chr10	102436881	.	T	TGAAGTAC	12289.22	PASS	AB=0.671;AC=13;AF=0.232;AN=56;BaseQRankSum=15.583;DP=747;FS=26.160;HRun=0;HaplotypeScore=193.4826;InbreedingCoeff=0.4999;MQ=82.36;MQ0=0;MQRankSum=-16.919;QD=62.07;ReadPosRankSum=-0.351;VQSLOD=3.2572;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.33:0,96,2643	0/0:17,0:17:51.15:0,51,1327	0/0:32,0:32:90.31:0,90,2169	0/0:27,0:27:59.42:0,59,1650	0/0:35,0:35:99:0,105,2882	1/1:9,16:25:40.17:1815,40,0	0/1:12,7:21:47.58:1094,0,48	0/0:56,0:56:99:0,166,4294	0/1:15,11:26:26.66:1478,0,27	0/0:30,0:30:90.31:0,90,2517	0/0:21,0:21:60.18:0,60,1520	0/0:24,0:24:72.24:0,72,1838	0/0:19,0:19:57.20:0,57,1581	1/1:7,18:26:60.21:1911,60,0	0/1:11,15:26:42.34:1573,0,42	0/0:32,0:32:96.33:0,96,2646	0/0:31,0:31:93.28:0,93,2490	0/0:29,0:29:84.29:0,84,2151	0/0:23,0:23:69.24:0,69,1893	0/0:37,0:37:99:0,108,2857	0/0:20,0:20:57.18:0,57,1455	0/1:7,8:15:44.35:815,0,44	0/1:8,8:16:19.68:689,0,20	1/1:7,12:19:25.17:1299,25,0	1/1:10,14:24:24.60:1616,25,0	0/0:32,0:32:84.28:0,84,2282	0/0:38,0:38:99:0,114,3052	0/0:13,0:13:39.13:0,39,1091
chr10	102437974	.	T	TC	7113.90	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=18.398;DP=678;FS=14.001;HRun=1;HaplotypeScore=137.9946;InbreedingCoeff=0.9997;MQ=84.42;MQ0=0;MQRankSum=-14.202;QD=40.19;ReadPosRankSum=-0.168;VQSLOD=2.5727;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,142,2200	0/0:12,0:12:36.12:0,36,500	0/0:28,0:28:72.73:0,73,1036	0/0:23,0:23:54.66:0,55,790	0/0:22,0:22:66.20:0,66,902	1/1:2,18:20:54.18:859,54,0	1/1:2,16:18:42.14:669,42,0	0/0:25,0:25:72.24:0,72,1003	1/1:0,15:15:45.15:717,45,0	0/0:30,0:30:90.30:0,90,1259	0/0:19,0:19:54.17:0,54,738	0/0:24,0:24:72.23:0,72,986	0/0:33,0:33:96.32:0,96,1333	1/1:1,16:17:39.13:620,39,0	1/1:1,25:26:66.23:1049,66,0	0/0:25,1:26:30.52:0,31,982	0/0:38,0:38:99:0,108,1487	0/0:17,0:17:48.16:0,48,667	0/0:22,0:22:66.15:0,66,866	0/0:20,0:20:60.17:0,60,805	0/0:28,0:28:84.28:0,84,1169	1/1:2,20:22:51.17:813,51,0	1/1:1,26:27:78.27:1241,78,0	1/1:2,11:13:27.09:429,27,0	1/1:1,18:19:45.15:717,45,0	0/0:31,0:31:93.30:0,93,1285	0/0:34,0:34:99:0,102,1424	0/0:13,0:13:39.13:0,39,545
chr10	102438548	.	T	TGGCTG	10797.18	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=16.287;DP=615;FS=2.002;HRun=0;HaplotypeScore=165.8568;InbreedingCoeff=0.9970;MQ=72.17;MQ0=0;MQRankSum=-15.128;QD=67.91;ReadPosRankSum=-1.692;VQSLOD=5.6238;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,2964	0/0:9,0:9:27.07:0,27,477	0/0:25,0:24:66.23:0,66,1417	0/0:21,0:21:60.19:0,60,1190	0/0:19,0:19:57.18:0,57,1227	1/1:9,15:24:69.24:1730,69,0	1/1:8,11:19:57.19:1439,57,0	0/0:33,0:33:90.30:0,90,1918	1/1:6,9:15:45.14:1092,45,0	0/0:22,0:22:60.05:0,60,1338	0/0:13,0:13:39.13:0,39,869	0/0:28,0:28:81.25:0,81,1648	0/0:13,0:13:39.12:0,39,828	1/1:7,12:19:54.19:1426,54,0	1/1:6,14:20:57.20:1513,57,0	0/0:22,0:22:66.21:0,66,1426	0/0:30,0:30:87.28:0,87,1837	0/0:24,0:24:69.21:0,69,1494	0/0:27,0:27:78.23:0,78,1562	0/0:35,0:35:99:0,102,2169	0/0:36,0:36:99:0,105,2287	1/1:9,11:20:51.16:1241,51,0	1/1:9,5:14:39.13:867,39,0	1/1:6,8:14:17.17:555,17,0	1/1:9,5:14:39.13:932,39,0	0/0:27,0:27:78.23:0,78,1645	0/0:20,0:20:57.20:0,57,1226	0/0:6,0:6:18.06:0,18,401
chr10	102438553	.	G	GC	1846.12	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.398;DP=573;FS=14.640;HRun=0;HaplotypeScore=119.1514;InbreedingCoeff=0.9765;MQ=74.83;MQ0=0;MQRankSum=-13.649;QD=16.05;ReadPosRankSum=3.384;VQSLOD=5.2691;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,1998	0/0:7,0:7:15.05:0,15,210	0/0:28,0:27:81.24:0,81,1075	0/0:22,0:22:57.19:0,57,784	0/0:19,0:19:54.15:0,54,733	1/1:0,15:15:39.62:372,40,0	1/1:0,11:11:32.93:270,33,0	0/0:32,0:32:93.29:0,93,1256	1/1:2,10:12:29.96:278,30,0	0/0:22,0:22:66.20:0,66,883	0/0:13,0:13:39.13:0,39,540	0/0:27,0:27:78.24:0,78,1063	0/0:14,0:14:42.14:0,42,586	1/1:2,12:14:38.19:305,38,0	1/1:1,14:15:44.64:373,45,0	0/0:24,0:24:72.24:0,72,1006	0/0:31,0:31:90.30:0,90,1257	0/0:25,0:25:75.25:0,75,1045	0/0:25,0:25:75.23:0,75,1031	0/0:31,0:31:93.31:0,93,1300	0/0:35,0:35:99:0,105,1467	1/1:5,11:16:17.85:188,18,0	1/1:4,6:10:10.15:81,10,0	1/1:3,8:11:11.68:89,12,0	1/1:5,6:11:10.78:101,11,0	0/0:26,0:26:78.24:0,78,1060	0/0:20,0:20:60.20:0,60,839	0/0:7,0:7:21.05:0,21,276
chr10	102438555	.	T	TCC	6786.63	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=16.757;DP=613;FS=9.862;HRun=0;HaplotypeScore=136.7012;InbreedingCoeff=0.9965;MQ=72.15;MQ0=0;MQRankSum=-15.693;QD=43.23;ReadPosRankSum=-1.471;VQSLOD=5.1416;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,151,2439	0/0:5,0:5:15.05:0,15,245	0/0:28,0:28:77.85:0,78,1198	0/0:21,0:21:60.20:0,60,949	0/0:18,0:18:54.18:0,54,870	1/1:2,15:17:48.16:822,48,0	1/1:13,11:24:72.18:1138,72,0	0/0:31,0:31:87.29:0,87,1398	1/1:10,10:20:60.12:926,60,0	0/0:22,0:22:60.20:0,60,976	0/0:13,0:13:39.13:0,39,636	0/0:27,0:27:81.26:0,81,1298	0/0:14,0:14:42.14:0,42,685	1/1:9,12:21:63.17:1024,63,0	1/1:9,14:23:63.19:1020,63,0	0/0:26,0:26:75.24:0,75,1200	0/0:32,0:32:93.32:0,93,1513	0/0:26,0:26:75.26:0,75,1224	0/0:25,0:25:75.26:0,75,1223	0/0:30,0:30:90.31:0,90,1457	0/0:35,0:35:99:0,105,1707	1/1:5,11:16:42.09:612,42,0	1/1:3,6:9:27.09:418,27,0	1/1:9,8:17:29.64:404,30,0	1/1:4,6:10:27.09:424,27,0	0/0:24,0:24:72.25:0,72,1174	0/0:21,0:21:60.20:0,60,979	0/0:7,0:7:21.07:0,21,338
chr10	102439157	.	TCCCCCC	T	5104.20	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=4.930;DP=298;FS=18.369;HRun=14;HaplotypeScore=68.0847;InbreedingCoeff=0.8608;MQ=72.60;MQ0=1;MQRankSum=-10.429;QD=36.20;ReadPosRankSum=7.062;VQSLOD=1.6300;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:24.05:0,24,421	0/0:1,0:1:3.01:0,3,43	0/0:10,0:9:13.24:0,13,259	0/0:9,0:8:6.49:0,6,117	0/0:8,0:9:15.03:0,15,374	1/1:0,10:10:27.09:515,27,0	1/1:2,15:17:36.10:686,36,0	0/0:9,0:13:20.97:0,21,183	1/1:3,18:21:42.07:781,42,0	0/0:3,0:3:6.02:0,6,137	0/0:5,0:5:5.58:0,6,107	0/0:8,0:9:13.29:0,13,340	0/0:9,0:9:15.05:0,15,336	1/1:4,19:24:54.09:1007,54,0	1/1:2,21:23:48.14:914,48,0	0/0:8,0:8:16.30:0,16,318	0/0:7,0:7:18.06:0,18,546	0/0:8,0:8:16.30:0,16,457	0/0:4,0:7:10.82:0,11,103	0/0:2,0:4:10.84:0,11,123	0/0:11,0:16:22.27:0,22,255	1/1:2,8:10:12.02:229,12,0	1/1:2,3:5:6:114,6,0	1/1:2,13:15:18.03:343,18,0	1/1:2,14:16:27.07:514,27,0	0/0:9,0:12:19.85:0,20,263	0/0:7,0:10:21.05:0,21,290	0/0:4,0:6:7.82:0,8,88
chr10	102439921	.	TTCCA	T	10109.45	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=18.425;DP=759;FS=4.793;HRun=0;HaplotypeScore=144.2833;InbreedingCoeff=0.9996;MQ=73.47;MQ0=0;MQRankSum=-5.563;QD=41.95;ReadPosRankSum=3.669;VQSLOD=4.8404;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,144,3786	0/0:9,0:9:24.08:0,24,612	0/0:19,0:19:48.08:0,48,1186	0/0:19,0:19:47.93:0,48,1010	0/0:20,0:20:57.20:0,57,1536	1/1:1,19:20:54.19:1024,54,0	1/1:6,33:39:78.19:1404,78,0	0/0:16,0:16:45.15:0,45,1188	1/1:0,26:26:69.24:1309,69,0	0/0:25,0:25:72.25:0,72,1898	0/0:14,0:14:39.12:0,39,963	0/0:40,0:40:99:0,111,2885	0/0:36,0:36:99:0,102,2648	1/1:2,23:25:63.22:1195,63,0	1/1:2,22:24:60.21:1138,60,0	0/0:27,0:27:78.25:0,78,2049	0/0:41,0:41:99:0,123,3170	0/0:23,0:23:60.17:0,60,1551	0/0:25,0:25:69.22:0,69,1776	0/0:19,0:19:51.16:0,51,1319	0/0:61,0:61:99:0,178,4766	1/1:1,15:16:30.10:569,30,0	1/1:0,14:14:36.12:683,36,0	1/1:5,38:43:75.26:1423,75,0	1/1:3,31:34:72.25:1366,72,0	0/0:26,0:26:78.26:0,78,2000	0/0:30,0:29:87.28:0,87,2215	0/0:16,0:16:48.14:0,48,1236
chr10	102440624	.	A	AC	2168.92	PASS	AB=0.605;AC=12;AF=0.214;AN=56;BaseQRankSum=16.660;DP=633;FS=3.223;HRun=1;HaplotypeScore=144.3164;InbreedingCoeff=0.3836;MQ=78.96;MQ0=0;MQRankSum=-15.774;QD=12.25;ReadPosRankSum=-0.616;VQSLOD=2.2232;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:99:0,120,1558	0/0:9,0:9:27.07:0,27,335	0/0:28,0:28:81.18:0,81,972	0/0:18,0:18:47.73:0,48,562	0/0:21,0:21:63.20:0,63,815	0/1:6,17:23:9.90:362,0,10	0/1:8,17:25:40.04:293,0,40	0/0:25,0:25:75.24:0,75,974	0/1:5,15:20:21.57:273,0,22	0/0:23,0:23:68.89:0,69,868	0/0:16,0:16:36.11:0,36,455	0/0:31,0:31:93.29:0,93,1193	0/0:27,0:27:78.25:0,78,1011	0/1:5,11:16:16.22:233,0,16	1/1:2,13:15:8.68:244,9,0	0/0:23,0:23:69.21:0,69,882	0/0:34,0:34:99:0,102,1292	0/0:20,0:20:60.19:0,60,777	0/0:20,0:20:60.15:0,60,741	0/0:19,0:19:54.18:0,54,701	0/0:44,0:44:99:0,126,1621	0/1:10,9:19:32.49:206,0,32	0/1:6,10:16:0.71:197,0,1	1/1:8,12:20:3.63:117,4,0	1/1:3,20:23:21.80:401,22,0	0/0:31,0:31:87.28:0,87,1130	0/0:20,0:20:60.19:0,60,776	0/0:5,0:5:15.05:0,15,195
chr10	102440626	.	T	TGAAGC	11633.60	PASS	AB=0.656;AC=13;AF=0.232;AN=56;BaseQRankSum=18.748;DP=679;FS=1.430;HRun=0;HaplotypeScore=199.8966;InbreedingCoeff=0.5369;MQ=76.15;MQ0=0;MQRankSum=-18.875;QD=53.12;ReadPosRankSum=-1.678;VQSLOD=4.3761;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:99:0,129,2907	0/0:9,0:9:27.09:0,27,611	0/0:28,0:28:84.24:0,84,1634	0/0:17,0:17:47.75:0,48,972	0/0:21,0:21:63.22:0,63,1429	0/1:9,17:26:28.86:1475,0,29	1/1:17,17:34:90.10:2107,90,0	0/0:29,0:29:84.25:0,84,1773	1/1:12,15:27:50.23:1546,50,0	0/0:23,0:23:69.24:0,69,1606	0/0:15,0:15:39.12:0,39,811	0/0:31,0:31:90.31:0,90,2071	0/0:28,0:28:78.27:0,78,1790	0/1:9,11:20:36.03:973,0,36	1/1:9,13:22:43.20:1389,43,0	0/0:23,0:23:69.23:0,69,1540	0/0:34,0:34:99:0,102,2303	0/0:20,0:20:60.21:0,60,1362	0/0:20,0:20:57.19:0,57,1259	0/0:19,0:19:57.18:0,57,1259	0/0:43,0:43:99:0,123,2738	0/1:11,10:21:41.93:886,0,42	0/1:11,9:21:36.17:895,0,36	0/1:13,12:25:3.15:852,0,3	1/1:3,20:23:22.92:1511,23,0	0/0:29,0:29:87.30:0,87,2002	0/0:23,0:23:69.19:0,69,1417	0/0:5,0:5:15.05:0,15,350
chr10	102441246	.	T	TG	467.99	PASS	AC=18;AF=0.346;AN=52;BaseQRankSum=0.381;DP=127;FS=4.184;HRun=7;HaplotypeScore=18.4430;InbreedingCoeff=0.6148;MQ=105.77;MQ0=0;MQRankSum=-0.777;QD=14.18;ReadPosRankSum=-0.551;VQSLOD=1.4497;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:10:29.08:0,29,265	0/0:3,0:3:9:0,9,81	0/0:8,0:8:8.58:0,9,67	0/0:12,0:11:7.18:0,7,103	0/0:2,0:2:6.01:0,6,58	1/1:2,1:3:6.01:63,6,0	1/1:0,4:4:6.02:72,6,0	0/0:10,0:10:24.03:0,24,231	1/1:0,3:3:3.01:36,3,0	0/0:2,0:2:3:0,3,29	0/0:2,0:2:6:0,6,52	0/0:8,0:8:17.49:0,17,165	0/0:5,0:5:9.01:0,9,87	1/1:0,1:1:3.01:36,3,0	1/1:0,7:7:18.06:217,18,0	./.	0/0:8,0:8:21:0,21,195	0/0:6,0:6:10.88:0,11,114	./.	0/0:1,0:1:2.99:0,3,23	0/0:11,0:11:30.04:0,30,289	1/1:2,2:4:3.01:36,3,0	1/1:1,0:1:3:25,3,0	1/1:1,5:6:6.02:72,6,0	1/1:1,3:4:6.02:72,6,0	0/0:3,0:3:6.01:0,6,58	0/0:2,0:2:6.01:0,6,58	0/0:1,0:1:3:0,3,29
chr10	102441420	.	GC	G	2628.78	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.626;DP=346;FS=0.000;HRun=6;HaplotypeScore=57.5634;InbreedingCoeff=0.9641;MQ=96.75;MQ0=0;MQRankSum=-7.550;QD=24.12;ReadPosRankSum=0.331;VQSLOD=3.0342;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.25:0,78,1016	0/0:6,0:6:18.06:0,18,236	0/0:18,0:18:35.73:0,36,463	0/0:23,0:23:8.64:0,9,467	0/0:4,0:4:12.04:0,12,158	1/1:0,12:12:30.08:321,30,0	1/1:2,18:20:42.10:450,42,0	0/0:14,0:14:30.01:0,30,394	1/1:0,8:8:24.06:255,24,0	0/0:7,0:7:21.07:0,21,276	0/0:11,0:11:30.10:0,30,394	0/0:13,0:13:39.13:0,39,513	0/0:7,0:7:15.05:0,15,197	1/1:0,11:11:33.08:352,33,0	1/1:0,13:13:39.10:418,39,0	0/0:7,0:7:18.03:0,18,207	0/0:32,0:32:87.28:0,87,1138	0/0:12,0:12:36.12:0,36,473	0/0:8,0:8:21.07:0,21,276	0/0:6,0:6:18.06:0,18,236	0/0:14,0:14:27.07:0,27,339	1/1:1,3:4:9.02:96,9,0	1/1:2,8:10:18.04:192,18,0	1/1:6,11:17:39.05:403,39,0	1/1:1,13:14:33.08:354,33,0	0/0:11,0:11:33.11:0,33,434	0/0:10,0:10:30.10:0,30,389	0/0:5,0:5:15.03:0,15,181
chr10	102441431	.	AC	A	3069.05	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.223;DP=369;FS=3.517;HRun=5;HaplotypeScore=57.9264;InbreedingCoeff=0.9694;MQ=100.12;MQ0=0;MQRankSum=-9.828;QD=24.55;ReadPosRankSum=0.136;VQSLOD=2.4522;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.26:0,78,1062	0/0:6,0:6:15.05:0,15,202	0/0:16,0:16:30.77:0,31,366	0/0:31,0:30:39.43:0,39,708	0/0:5,0:5:15.03:0,15,188	1/1:0,17:17:45.09:494,45,0	1/1:1,18:19:54.03:568,54,0	0/0:16,0:16:36.12:0,36,492	1/1:1,8:9:24.07:272,24,0	0/0:7,0:7:18.06:0,18,246	0/0:10,0:10:27.09:0,27,369	0/0:14,0:14:39.13:0,39,533	0/0:6,0:6:18.06:0,18,245	1/1:0,13:13:36.10:406,36,0	1/1:2,13:15:45.12:502,45,0	0/0:6,0:6:18.06:0,18,246	0/0:29,0:29:87.29:0,87,1189	0/0:13,0:13:33.09:0,33,434	0/0:8,0:8:24.08:0,24,325	0/0:7,0:7:21.07:0,21,286	0/0:14,0:14:38.94:0,39,468	1/1:0,6:6:15:156,15,0	1/1:1,8:9:20.98:209,21,0	1/1:1,20:21:21.64:418,22,0	1/1:4,12:16:24.02:257,24,0	0/0:13,0:13:36.12:0,36,492	0/0:10,0:10:30.10:0,30,409	0/0:4,0:4:6.02:0,6,82
chr10	102441514	.	CCTCT	C	45.41	PASS	AC=4;AF=0.105;AN=38;BaseQRankSum=1.606;DP=424;FS=2.553;HRun=0;HaplotypeScore=72.0318;InbreedingCoeff=0.3647;MQ=64.42;MQ0=10;MQRankSum=-1.022;QD=1.23;ReadPosRankSum=0.772;VQSLOD=1.5188;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:12.01:0,12,159	./.	./.	./.	0/0:14,0:14:9.03:0,9,129	0/0:18,0:18:6.02:0,6,137	0/0:25,0:24:12.04:0,12,233	./.	0/0:12,0:12:3.01:0,3,43	0/0:7,0:7:3.01:0,3,70	./.	0/0:14,0:14:9.02:0,9,139	0/0:11,0:11:6.01:0,6,68	0/0:19,0:18:6.02:0,6,118	0/0:17,0:16:18.05:0,18,310	0/0:11,0:11:6.02:0,6,140	1/1:19,1:20:3.01:45,3,0	1/1:12,5:17:6.02:92,6,0	0/0:19,0:18:9.03:0,9,170	./.	0/0:19,0:18:12.04:0,12,220	./.	./.	0/0:31,0:31:6.02:0,6,132	0/0:14,0:12:2.92:0,3,23	0/0:18,0:17:11.96:0,12,113	0/0:8,0:12:6.02:0,6,86	./.
chr10	102441963	.	C	CGAA	9718.69	PASS	AB=0.967;AC=19;AF=0.339;AN=56;BaseQRankSum=16.277;DP=655;FS=5.251;HRun=0;HaplotypeScore=118.6834;InbreedingCoeff=0.9438;MQ=86.84;MQ0=0;MQRankSum=-9.119;QD=41.01;ReadPosRankSum=-0.503;VQSLOD=5.6017;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,114,1774	0/0:14,0:14:36.12:0,36,563	0/0:31,0:30:75.25:0,75,1152	0/0:26,0:24:53.92:0,54,799	0/0:18,0:18:51.16:0,51,775	1/1:1,13:14:36.08:732,36,0	1/1:3,23:26:63.22:1328,63,0	0/0:31,0:31:63.16:0,63,939	1/1:2,13:15:39.13:837,39,0	0/0:23,0:23:48.16:0,48,731	0/0:16,0:16:42.14:0,42,657	0/0:18,0:18:48.16:0,48,747	0/0:18,0:18:48.16:0,48,750	1/1:4,17:21:48.16:1038,48,0	1/1:6,18:24:54.11:1080,54,0	0/1:28,1:29:3.49:3,0,1092	0/0:33,0:33:87.27:0,87,1335	0/0:27,0:27:75.26:0,75,1172	0/0:18,0:18:42.14:0,42,657	0/0:13,0:13:36.12:0,36,563	0/0:39,0:39:99:0,111,1711	1/1:3,15:21:45.07:827,45,0	1/1:4,20:24:60.16:1249,60,0	1/1:7,33:41:74.83:1525,75,0	1/1:3,19:22:57.07:1099,57,0	0/0:21,0:21:45.15:0,45,704	0/0:22,0:22:54.17:0,54,821	0/0:8,0:8:21.07:0,21,320
chr10	102442130	.	GGC	G	1847.91	PASS	AB=1.000;AC=22;AF=0.423;AN=52;BaseQRankSum=8.000;DP=429;FS=1.559;HRun=0;HaplotypeScore=99.6522;InbreedingCoeff=0.8463;MQ=63.63;MQ0=5;MQRankSum=-2.801;QD=9.10;ReadPosRankSum=-0.052;VQSLOD=2.9368;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:41.81:0,42,356	0/0:4,0:4:8.92:0,9,64	1/1:12,0:8:10.65:60,11,0	./.	0/0:8,0:8:17.81:0,18,164	1/1:9,0:9:20.34:133,20,0	1/1:25,0:25:44.58:336,45,0	0/1:12,0:12:9.67:10,0,112	1/1:15,10:25:56.62:460,57,0	0/0:14,0:13:20.94:0,21,188	0/0:5,0:5:14.93:0,15,155	0/0:20,0:20:22.89:0,23,350	0/0:16,0:16:31.98:0,32,277	1/1:14,5:18:32.98:282,33,0	1/1:21,2:23:23.98:203,24,0	0/0:22,0:22:22.07:0,22,425	0/0:21,0:21:41.24:0,41,343	0/0:29,0:29:51.68:0,52,399	0/1:18,0:18:1.36:1,0,130	./.	0/0:27,0:26:54.39:0,54,374	1/1:9,3:12:14.78:112,15,0	1/1:6,1:7:14.90:115,15,0	1/1:28,1:28:26.86:207,27,0	1/1:12,0:12:17.87:134,18,0	0/0:14,0:14:38.40:0,38,305	0/0:11,0:11:26.49:0,26,176	0/0:5,0:5:9.44:0,9,71
chr10	102442139	.	GCACA	G	718.59	PASS	AB=0.975;AC=23;AF=0.523;AN=44;BaseQRankSum=6.678;DP=435;FS=11.965;HRun=0;HaplotypeScore=117.2322;InbreedingCoeff=0.2641;MQ=53.66;MQ0=12;MQRankSum=-4.064;QD=2.69;ReadPosRankSum=0.423;VQSLOD=1.3823;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:21.07:0,21,369	0/0:6,0:6:8.86:0,9,146	./.	./.	0/0:16,0:14:6.80:0,7,227	./.	0/1:23,0:23:0:0,0,0	0/0:9,0:9:2.97:0,3,20	1/1:22,0:22:30.02:271,30,0	0/1:16,0:15:9.24:9,0,181	0/0:6,0:6:9.89:0,10,130	0/0:19,0:19:17.09:0,17,345	0/1:17,1:17:28.14:28,0,209	1/1:17,0:16:12.01:111,12,0	1/1:17,0:16:6.01:55,6,0	0/1:18,3:21:22.38:22,0,329	0/0:24,0:24:16.81:0,17,155	0/1:30,0:30:8.29:8,0,114	0/1:18,0:17:12.25:57,0,12	./.	0/1:33,0:32:15.08:15,0,54	1/1:9,0:9:8.79:63,9,0	1/1:6,0:6:3:28,3,0	./.	./.	1/1:15,0:15:5.38:40,5,0	1/1:15,0:15:12.02:132,12,0	1/1:7,0:7:3.01:32,3,0
chr10	102442164	.	CACACACACACACACACACACACACAT	C	4441.09	PASS	AB=1.000;AC=17;AF=0.327;AN=52;BaseQRankSum=7.130;DP=351;FS=5.744;HRun=0;HaplotypeScore=201.0344;InbreedingCoeff=0.7393;MQ=50.64;MQ0=18;MQRankSum=-4.389;QD=68.32;ReadPosRankSum=1.728;VQSLOD=4.0813;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:48.16:0,48,3831	0/0:5,0:5:12.04:0,12,1219	0/0:5,0:2:2.98:0,3,55	0/0:7,0:5:15.05:0,15,717	0/0:20,0:18:37.01:0,37,2857	1/1:2,0:2:2.84:15,3,0	1/1:4,0:4:2.89:74,3,0	0/0:15,0:13:33.68:0,34,1328	1/1:4,8:13:32.94:2020,33,0	0/0:17,0:16:42.14:0,42,3086	0/0:8,0:8:18.06:0,18,1611	0/0:19,0:19:42.07:0,42,3347	0/0:14,0:12:23.75:0,24,2159	1/1:2,5:7:18.05:988,18,0	1/1:2,2:3:9.03:449,9,0	0/0:15,0:15:33.57:0,34,3014	0/0:27,0:26:74.38:0,74,4712	0/0:26,0:26:36.57:0,37,2425	0/1:21,0:19:23.04:23,0,1699	./.	0/0:38,0:37:39.19:0,39,3372	1/1:3,3:7:12.02:603,12,0	1/1:1,0:1:3.01:194,3,0	1/1:4,1:4:6.01:75,6,0	./.	0/0:15,0:14:33.09:0,33,1536	0/0:13,0:13:30.10:0,30,2058	0/0:8,0:8:12.04:0,12,541
chr10	102442182	.	CACACACAT	C	3600.47	PASS	AB=0.987;AC=28;AF=0.519;AN=54;BaseQRankSum=5.447;DP=430;FS=0.437;HRun=0;HaplotypeScore=134.8363;InbreedingCoeff=0.5031;MQ=61.17;MQ0=14;MQRankSum=-1.675;QD=13.43;ReadPosRankSum=0.866;VQSLOD=2.7470;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:34:0,34,862	0/0:5,0:5:15:0,15,394	0/0:14,0:10:20.21:0,20,245	0/0:16,0:14:28.20:0,28,310	0/0:19,0:18:36.43:0,36,682	1/1:5,0:5:11.98:97,12,0	1/1:22,0:22:35.19:260,35,0	0/1:20,0:19:62.85:260,0,63	1/1:15,0:15:42.07:775,42,0	0/0:21,0:20:53.83:0,54,842	0/0:9,0:9:21.52:0,22,411	0/0:17,0:17:38.99:0,39,862	0/0:15,0:13:26.94:0,27,519	1/1:9,0:9:21.03:351,21,0	1/1:14,0:12:20.99:259,21,0	0/0:16,0:16:33.04:0,33,857	0/1:24,1:24:99:147,0,477	0/1:23,1:24:55.24:55,0,294	0/1:19,0:19:36.04:258,0,36	./.	0/1:42,0:41:99:331,0,206	1/1:9,0:9:9.03:185,9,0	1/1:4,0:4:3.48:70,3,0	1/1:25,0:24:20.55:161,21,0	1/1:5,0:5:8.95:69,9,0	1/1:14,0:13:21.04:246,21,0	0/1:8,0:8:3.63:4,0,25	1/1:1,6:7:3.01:73,3,0
chr10	102442186	.	CACAT	C	4195.85	PASS	AC=34;AF=0.630;AN=54;BaseQRankSum=7.143;DP=439;FS=1.462;HRun=0;HaplotypeScore=112.7115;InbreedingCoeff=0.8428;MQ=66.11;MQ0=12;MQRankSum=-3.543;QD=15.26;ReadPosRankSum=2.548;VQSLOD=3.5724;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:36.90:0,37,521	0/0:6,0:6:18:0,18,264	0/0:17,0:13:29.10:0,29,320	0/0:17,0:15:31.19:0,31,333	0/0:17,0:16:35.84:0,36,429	1/1:5,0:5:11.98:97,12,0	1/1:25,0:25:41.17:307,41,0	1/1:19,0:18:30.93:331,31,0	1/1:17,0:17:48.05:543,48,0	0/0:21,0:20:53.25:0,53,537	0/0:9,0:9:15.89:0,16,181	0/0:18,0:18:35.14:0,35,460	0/0:15,0:13:0.48:0,0,254	1/1:9,0:9:20.95:228,21,0	1/1:16,0:14:26.97:250,27,0	0/0:15,0:15:5.75:0,6,458	1/1:27,0:26:47:319,47,0	1/1:25,0:25:4.01:53,4,0	1/1:3,16:19:35.31:439,35,0	./.	1/1:40,0:39:76.45:592,76,0	1/1:9,0:9:9.01:102,9,0	1/1:6,0:6:3.14:41,3,0	1/1:26,0:25:23.44:184,23,0	1/1:5,0:5:8.95:69,9,0	1/1:2,11:12:35.66:307,36,0	1/1:7,0:7:15.05:285,15,0	1/1:7,0:7:3.01:50,3,0
chr10	102442188	.	CAT	C	4123.29	PASS	AC=34;AF=0.630;AN=54;BaseQRankSum=6.283;DP=431;FS=2.100;HRun=0;HaplotypeScore=100.8147;InbreedingCoeff=0.9103;MQ=68.87;MQ0=10;MQRankSum=-3.704;QD=15.27;ReadPosRankSum=2.514;VQSLOD=3.4313;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:37.38:0,37,412	0/0:6,0:6:15.87:0,16,177	0/0:17,0:13:29.10:0,29,320	0/0:19,0:17:36.85:0,37,365	0/0:17,0:16:36.40:0,36,353	1/1:5,0:5:11.98:97,12,0	1/1:25,0:25:41.17:307,41,0	1/1:16,4:19:50.69:400,51,0	1/1:18,0:18:47.94:405,48,0	0/0:19,0:19:44.97:0,45,405	0/0:8,0:8:12.94:0,13,132	0/0:16,0:16:32.77:0,33,341	0/0:15,0:13:24.82:0,25,205	1/1:9,0:9:20.91:172,21,0	1/1:17,0:15:29.93:244,30,0	0/0:15,0:15:24.40:0,24,306	1/1:21,2:22:53.28:499,53,0	1/1:4,19:23:9.45:121,9,0	1/1:19,0:19:34.37:399,34,0	./.	1/1:38,0:38:73.11:613,73,0	1/1:3,6:9:8.61:66,9,0	1/1:1,5:6:3.47:28,3,0	1/1:26,0:25:23.67:185,24,0	1/1:5,0:5:8.95:69,9,0	1/1:14,0:13:37.88:288,38,0	1/1:6,0:6:18.03:200,18,0	1/1:7,0:7:3.01:31,3,0
chr10	102443015	.	GTT	G	5356.30	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=12.380;DP=591;FS=7.609;HRun=8;HaplotypeScore=93.6942;InbreedingCoeff=0.9177;MQ=77.12;MQ0=3;MQRankSum=0.020;QD=25.88;ReadPosRankSum=4.839;VQSLOD=4.0825;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,141,2317	0/0:11,0:11:30.10:0,30,506	0/0:20,0:19:47.61:0,48,663	0/1:21,0:19:14.46:14,0,345	0/0:18,0:19:56.67:0,57,894	1/1:0,18:18:54.17:659,54,0	1/1:3,25:28:63.19:768,63,0	0/0:26,0:26:72.24:0,72,1174	1/1:1,16:17:42.13:512,42,0	0/0:26,0:26:75.26:0,75,1265	0/0:13,0:13:36.11:0,36,581	0/0:14,0:14:39.11:0,39,606	0/0:20,0:20:54.18:0,54,886	1/1:1,18:18:36.11:439,36,0	1/1:1,21:22:63.19:768,63,0	0/0:15,1:16:11.57:0,12,725	0/0:31,0:31:81.28:0,81,1370	0/0:25,0:27:75.23:0,75,1190	0/0:21,0:21:48.16:0,48,770	0/0:11,0:11:33.10:0,33,526	0/0:21,0:21:60.20:0,60,990	1/1:2,20:22:57.17:695,57,0	1/1:1,14:14:33.10:403,33,0	1/1:0,26:26:54.17:658,54,0	1/1:1,18:19:36.11:439,36,0	0/0:24,0:24:66.19:0,66,1021	0/0:21,0:19:60.19:0,60,975	0/0:12,0:12:33.11:0,33,553
chr10	102443187	.	CGT	C	7537.62	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=17.338;DP=660;FS=11.320;HRun=0;HaplotypeScore=114.3603;InbreedingCoeff=0.9972;MQ=79.65;MQ0=0;MQRankSum=-1.323;QD=33.65;ReadPosRankSum=2.455;VQSLOD=6.7049;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.29:0,96,1667	0/0:8,0:8:24.08:0,24,432	0/0:22,0:22:63.21:0,63,1112	0/0:14,0:13:39:0,39,597	0/0:21,0:21:60.21:0,60,1080	1/1:2,18:20:51.17:714,51,0	1/1:4,22:26:57.19:798,57,0	0/0:33,0:33:82.52:0,83,1445	1/1:2,19:21:54.18:756,54,0	0/0:22,0:22:63.21:0,63,1103	0/0:20,0:20:54.18:0,54,963	0/0:22,0:22:66.23:0,66,1175	0/0:15,0:15:45.15:0,45,809	1/1:2,29:31:75.06:1049,75,0	1/1:2,23:25:60.20:840,60,0	0/0:19,1:20:15.19:0,15,930	0/0:44,0:44:99:0,129,2310	0/0:29,0:29:84.29:0,84,1511	0/0:21,0:21:57.18:0,57,965	0/0:19,0:19:51.15:0,51,887	0/0:37,0:37:99:0,102,1809	1/1:4,23:27:60.20:840,60,0	1/1:2,25:27:60.20:840,60,0	1/1:1,23:24:57.02:776,57,0	1/1:0,23:23:66.22:924,66,0	0/0:29,0:29:84.29:0,84,1495	0/0:16,0:15:48.16:0,48,863	0/0:10,0:10:30.10:0,30,506
chr10	102443702	.	A	ACTCCTTCTTCTC	9991.07	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.514;DP=509;FS=0.000;HRun=0;HaplotypeScore=180.6039;InbreedingCoeff=0.9863;MQ=63.14;MQ0=1;MQRankSum=-11.451;QD=133.21;ReadPosRankSum=2.882;VQSLOD=5.2813;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,3568	0/0:5,0:5:15.05:0,15,594	0/0:14,0:13:38.80:0,39,1379	0/0:22,0:20:57.19:0,57,1955	0/0:20,0:20:60.19:0,60,2282	1/1:0,7:7:21.07:1195,21,0	1/1:2,11:13:33.11:1758,33,0	0/0:25,0:25:75.24:0,75,2761	1/1:1,6:7:21.07:1054,21,0	0/0:14,0:14:42.14:0,42,1664	0/0:13,0:13:36.12:0,36,1287	0/0:18,0:18:54.19:0,54,2089	0/0:18,0:18:54.19:0,54,1956	1/1:3,6:9:17.98:1000,18,0	1/1:1,9:10:27.08:1389,27,0	0/0:14,0:14:42.14:0,42,1523	0/0:48,0:48:99:0,144,5478	0/0:42,0:42:99:0,126,4813	0/0:27,0:27:81.26:0,81,2871	0/0:16,0:16:45.15:0,45,1782	0/0:49,0:49:99:0,141,5454	1/1:0,3:4:12.04:667,12,0	1/1:0,7:7:15.73:990,16,0	1/1:4,5:9:20.89:888,21,0	1/1:2,6:8:21.53:1050,22,0	0/0:21,0:21:60.20:0,60,2136	0/0:21,0:21:63.22:0,63,2447	0/0:9,0:9:27.09:0,27,1070
chr10	102443703	.	G	GTT	938.76	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.592;DP=514;FS=0.000;HRun=0;HaplotypeScore=115.6110;InbreedingCoeff=0.9771;MQ=63.06;MQ0=1;MQRankSum=-11.980;QD=12.69;ReadPosRankSum=3.762;VQSLOD=3.2266;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,105,1677	0/0:5,0:5:15.05:0,15,245	0/0:14,0:13:38.96:0,39,598	0/0:22,0:20:45.21:0,45,845	0/0:20,0:20:60.20:0,60,960	1/1:0,7:7:20.78:141,21,0	1/1:3,11:14:32.49:214,32,0	0/0:26,0:26:75.26:0,75,1222	1/1:1,6:7:20.69:150,21,0	0/0:15,0:15:42.14:0,42,685	0/0:13,0:13:36.10:0,36,539	0/0:18,0:18:54.18:0,54,877	0/0:18,0:18:54.17:0,54,850	1/1:2,6:8:17.39:104,17,0	1/1:1,9:10:23.50:146,23,0	0/0:14,0:14:42.13:0,42,660	0/0:50,0:50:99:0,144,2310	0/0:42,0:42:99:0,126,2040	0/0:27,0:27:78.26:0,78,1247	0/0:16,0:16:45.15:0,45,733	0/0:49,0:49:99:0,144,2302	1/1:1,3:4:11.66:68,12,0	1/1:0,7:7:9.16:96,9,0	1/1:4,5:9:17.74:117,18,0	1/1:1,6:7:17.68:114,18,0	0/0:21,0:21:57.19:0,57,926	0/0:21,0:21:63.22:0,63,1024	0/0:9,0:9:27.09:0,27,441
chr10	102443705	.	A	AC	2441.85	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.558;DP=583;FS=0.386;HRun=0;HaplotypeScore=151.0984;InbreedingCoeff=0.9956;MQ=61.99;MQ0=1;MQRankSum=-15.228;QD=17.20;ReadPosRankSum=0.342;VQSLOD=5.1158;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1548	0/0:5,0:5:15.05:0,15,210	0/0:15,0:14:41.93:0,42,557	0/0:23,0:21:57.17:0,57,763	0/0:22,0:22:60.20:0,60,839	1/1:6,7:13:29.53:256,30,0	1/1:13,11:24:56.92:484,57,0	0/0:28,0:28:81.26:0,81,1118	1/1:9,5:15:35.70:289,36,0	0/0:15,0:15:45.15:0,45,616	0/0:11,0:11:30.10:0,30,413	0/0:17,0:17:51.17:0,51,713	0/0:18,0:18:51.17:0,51,710	1/1:12,7:18:37.82:314,38,0	1/1:8,9:17:42.44:365,42,0	0/0:14,0:14:36.12:0,36,504	0/0:50,0:50:99:0,147,2048	0/0:40,0:40:99:0,120,1654	0/0:27,0:27:78.26:0,78,1090	0/0:16,0:16:45.15:0,45,629	0/0:50,0:50:99:0,147,2035	1/1:4,4:8:17.79:136,18,0	1/1:8,7:15:28.47:209,28,0	1/1:13,5:18:33.13:271,33,0	1/1:7,6:13:33.04:333,33,0	0/0:21,0:21:63.20:0,63,865	0/0:21,0:21:60.20:0,60,839	0/0:9,0:9:27.09:0,27,378
chr10	102443814	.	G	GA	5568.99	PASS	AB=0.846;AC=19;AF=0.339;AN=56;BaseQRankSum=12.559;DP=637;FS=1.060;HRun=9;HaplotypeScore=73.0306;InbreedingCoeff=0.9324;MQ=72.72;MQ0=0;MQRankSum=-4.450;QD=23.60;ReadPosRankSum=1.974;VQSLOD=5.7254;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:40:89.05:0,89,828	0/0:8,0:8:17.97:0,18,156	0/0:18,0:18:38.94:0,39,329	0/0:10,0:11:19.25:0,19,143	0/0:29,0:29:80.96:0,81,696	1/1:3,20:23:60.16:662,60,0	1/1:4,20:24:34.11:604,34,0	0/0:31,0:31:77.95:0,78,672	1/1:2,18:20:51.14:564,51,0	0/0:29,0:30:83.02:0,83,709	0/0:13,0:13:32.97:0,33,283	0/0:23,0:23:56.99:0,57,495	0/0:21,0:21:50.98:0,51,443	1/1:4,21:26:46.59:612,47,0	1/1:0,24:24:66.18:730,66,0	0/1:18,4:22:6.32:6,0,409	0/0:23,0:23:62.96:0,63,542	0/0:29,0:30:86.02:0,86,735	0/0:23,0:22:56.93:0,57,487	0/0:21,0:21:59.99:0,60,521	0/0:16,0:16:41.97:0,42,361	1/1:4,22:26:63.17:697,63,0	1/1:4,17:21:25.09:505,25,0	1/1:2,22:24:25.82:445,26,0	1/1:3,22:26:69.02:744,69,0	0/0:24,0:24:65.98:0,66,573	0/0:26,1:28:43.81:0,44,594	0/0:12,0:12:35.99:0,36,313
chr10	102444040	.	AT	A	5664.52	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=18.582;DP=598;FS=0.000;HRun=2;HaplotypeScore=114.8796;InbreedingCoeff=0.9988;MQ=70.50;MQ0=2;MQRankSum=-5.692;QD=30.79;ReadPosRankSum=0.692;VQSLOD=4.4041;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,156,2231	0/0:8,0:8:24.07:0,24,339	0/0:10,0:10:30.08:0,30,426	0/0:19,0:18:51.15:0,51,748	0/0:15,0:15:45.15:0,45,672	1/1:2,12:14:36.58:421,37,0	1/1:2,22:24:66.20:769,66,0	0/0:23,0:23:63.20:0,63,909	1/1:2,18:19:51.15:595,51,0	0/0:14,0:14:42.14:0,42,612	0/0:13,0:13:39.13:0,39,580	0/0:23,0:23:69.23:0,69,1029	0/0:24,0:24:69.21:0,69,1012	1/1:0,25:25:75.22:872,75,0	1/1:2,21:23:63.66:733,64,0	0/0:28,0:28:84.26:0,84,1219	0/0:40,0:40:99:0,120,1791	0/0:30,0:30:90.24:0,90,1300	0/0:12,0:12:33.11:0,33,493	0/0:20,0:20:60.19:0,60,878	0/0:35,0:35:99:0,102,1527	1/1:2,19:20:54.16:628,54,0	1/1:0,10:10:21.04:245,21,0	1/1:1,33:34:87.73:1016,88,0	1/1:1,11:12:33.57:385,34,0	0/0:19,0:19:57.19:0,57,851	0/0:19,0:19:51.17:0,51,763	0/0:10,0:10:30.10:0,30,449
chr10	102444738	.	C	CACAA	11134.65	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=14.218;DP=1019;FS=6.350;HRun=0;HaplotypeScore=246.4103;InbreedingCoeff=0.9203;MQ=53.07;MQ0=13;MQRankSum=-13.215;QD=44.72;ReadPosRankSum=-2.860;VQSLOD=3.8910;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:89.81:0,90,1592	0/1:25,0:25:26.26:26,0,872	0/0:72,0:37:55.07:0,55,984	0/0:52,0:24:54.75:0,55,773	0/0:43,0:43:87.23:0,87,1537	1/1:11,5:17:51.04:991,51,0	1/1:8,16:24:62.77:1336,63,0	0/0:46,0:45:99:0,111,1698	1/1:13,14:28:54.03:1823,54,0	0/0:59,0:59:99:0,139,2564	0/0:28,0:28:60.14:0,60,1079	0/0:45,0:45:99:0,122,1938	0/0:54,0:54:99:0,156,2555	1/1:14,9:25:57.18:1356,57,0	1/1:12,18:30:72.21:1732,72,0	0/0:44,1:45:39.98:0,40,1969	0/0:29,0:29:27.73:0,28,998	0/0:45,0:45:51.78:0,52,1642	0/0:25,0:24:63.14:0,63,948	0/0:39,0:39:87.13:0,87,1416	0/0:56,0:54:99:0,153,2444	1/1:19,12:31:40.65:1214,41,0	1/1:10,9:20:35.98:763,36,0	1/1:13,21:36:47.02:1064,47,0	1/1:5,8:13:33.11:829,33,0	0/0:37,0:37:95.92:0,96,1430	0/0:37,0:37:98.34:0,98,1549	0/0:15,0:15:45.07:0,45,748
chr10	102444739	.	AGAGT	A	1784.16	PASS	AB=0.823;AC=10;AF=0.179;AN=56;BaseQRankSum=11.031;DP=999;FS=17.948;HRun=0;HaplotypeScore=262.0093;InbreedingCoeff=-0.0482;MQ=53.53;MQ0=14;MQRankSum=-10.296;QD=8.62;ReadPosRankSum=-6.340;VQSLOD=0.2605;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:96.16:0,96,2484	0/0:23,1:24:55.05:0,55,1474	0/0:74,0:38:84.05:0,84,2202	0/0:55,0:25:57.08:0,57,1383	0/0:42,0:42:87.30:0,87,2387	0/1:12,3:15:28.22:340,0,28	0/1:19,1:20:26.12:145,0,26	0/0:45,0:45:25.42:0,25,3121	0/1:20,6:26:99:351,0,265	0/0:60,0:60:99:0,134,4476	0/0:28,0:28:63.21:0,63,1734	0/0:46,0:46:99:0,135,3514	0/0:54,0:54:99:0,160,4141	0/1:15,9:24:99:242,0,107	0/1:19,8:27:99:128,0,308	0/0:45,0:45:99:0,126,3244	0/0:26,1:28:73.66:0,74,1865	0/0:43,0:44:13.84:0,14,2755	0/0:23,0:23:63.20:0,63,1590	0/0:39,0:39:90.28:0,90,2198	0/0:57,1:57:99:0,162,4094	0/1:26,4:30:99:164,0,189	0/1:14,5:19:21.46:21,0,145	0/1:26,8:34:99:346,0,119	1/1:8,4:12:2.49:190,2,0	0/0:35,0:35:99:0,105,2649	0/0:34,0:36:98.51:0,99,2532	0/0:15,0:15:45.14:0,45,1197
chr10	102444746	.	AACACACATACACAC	A	2483.68	PASS	AB=0.949;AC=17;AF=0.304;AN=56;BaseQRankSum=18.234;DP=1012;FS=3.288;HRun=0;HaplotypeScore=431.5822;InbreedingCoeff=0.9107;MQ=52.74;MQ0=18;MQRankSum=-16.039;QD=12.17;ReadPosRankSum=-7.034;VQSLOD=-0.0819;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:93.32:0,93,5135	0/0:23,1:24:48.42:0,48,3210	0/0:68,0:34:78.09:0,78,3120	0/0:58,0:23:54.69:0,55,1778	0/0:40,0:40:99:0,108,5167	1/1:8,3:11:17.16:289,17,0	1/1:19,0:19:38.74:185,39,0	0/0:55,0:54:99:0,147,5767	1/1:18,6:24:39.95:488,40,0	0/0:63,0:62:99:0,178,8674	0/0:30,0:29:81.21:0,81,3622	0/0:46,0:46:99:0,132,7718	0/0:52,0:52:99:0,157,8603	1/1:18,6:25:53.02:478,53,0	1/1:24,3:27:23.08:378,23,0	0/0:46,0:46:99:0,114,7139	0/0:29,0:29:81.23:0,81,3773	0/0:43,0:44:14.77:0,15,5042	0/0:24,0:22:48.16:0,48,2076	0/0:42,0:42:99:0,105,4860	0/0:63,0:61:99:0,156,9415	1/1:24,4:28:27.38:172,27,0	1/1:16,3:19:32.32:232,32,0	0/1:35,2:37:27.72:105,0,28	1/1:12,2:14:33.13:365,33,0	0/0:37,0:37:99:0,108,5281	0/0:34,0:34:95.98:0,96,5457	0/0:17,0:17:51.18:0,51,3216
chr10	102444754	.	T	TAC	2163.56	PASS	AB=0.938;AC=16;AF=0.286;AN=56;BaseQRankSum=12.550;DP=1033;FS=7.431;HRun=0;HaplotypeScore=258.0204;InbreedingCoeff=0.8231;MQ=52.83;MQ0=20;MQRankSum=-11.198;QD=9.83;ReadPosRankSum=-0.692;VQSLOD=2.2449;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:81.26:0,81,1051	0/0:23,0:23:15.39:0,15,767	0/0:67,0:35:75.21:0,75,920	0/0:65,0:27:53.09:0,53,654	0/0:41,0:41:99:0,108,1325	0/1:14,1:15:2.17:91,0,2	1/1:16,4:20:12.04:196,12,0	0/0:50,0:49:99:0,121,1477	1/1:19,3:22:3.72:328,4,0	0/0:62,0:62:99:0,163,2031	0/0:32,0:31:78.17:0,78,990	0/0:45,0:45:99:0,101,1608	0/0:53,0:53:99:0,129,1727	1/1:26,2:28:20.28:302,20,0	1/1:24,9:33:33.11:544,33,0	0/0:48,1:49:84.55:0,85,1642	0/0:29,0:29:38.93:0,39,818	0/0:45,0:44:45.48:0,45,1182	0/0:19,0:17:36.12:0,36,465	0/0:43,0:43:99:0,108,1380	0/0:62,0:61:99:0,159,2049	1/1:24,4:28:21.07:333,21,0	1/1:18,4:22:17.73:262,18,0	1/1:33,4:37:17.84:263,18,0	0/1:14,1:15:14.52:38,0,15	0/0:38,0:38:93.26:0,93,1188	0/0:35,0:36:90.26:0,90,1136	0/0:17,0:17:51.17:0,51,662
chr10	102444756	.	CACACACAGTCAAACACACAT	C	9684.13	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=16.779;DP=1044;FS=7.973;HRun=0;HaplotypeScore=539.6857;InbreedingCoeff=0.8756;MQ=52.38;MQ0=20;MQRankSum=-15.179;QD=35.87;ReadPosRankSum=-10.126;VQSLOD=0.0305;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:84.29:0,84,5624	0/0:23,0:23:0.27:0,0,3272	0/0:67,0:37:84.23:0,84,2435	0/0:68,0:29:68.57:0,69,1919	0/0:41,0:41:99:0,117,6042	1/1:14,0:14:30.10:901,30,0	1/1:19,0:19:30.10:682,30,0	0/0:50,0:49:99:0,136,4986	1/1:25,0:25:54.19:1429,54,0	0/0:65,0:64:99:0,172,8693	0/0:32,0:31:84.29:0,84,3807	0/0:45,0:45:99:0,129,8982	0/0:53,0:53:99:0,134,9611	1/1:29,0:29:63.22:1567,63,0	1/1:33,0:33:78.27:1785,78,0	0/0:49,0:49:65.68:0,66,7660	0/0:28,0:29:56.86:0,57,4374	0/1:45,0:44:85.97:86,0,5592	0/0:17,0:15:36.12:0,36,1917	0/0:43,0:43:99:0,117,5295	0/0:64,0:63:99:0,167,10258	1/1:15,15:30:24.08:524,24,0	1/1:22,0:22:47.97:1076,48,0	1/1:37,0:37:10.23:575,10,0	1/1:16,0:16:36.12:1058,36,0	0/0:40,0:40:99:0,102,5529	0/0:36,0:36:92.98:0,93,6336	0/0:17,0:17:51.18:0,51,3259
chr10	102444776	.	T	TAC	5971.43	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.433;DP=1027;FS=4.238;HRun=0;HaplotypeScore=218.9799;InbreedingCoeff=0.9833;MQ=55.07;MQ0=10;MQRankSum=-11.890;QD=26.19;ReadPosRankSum=-5.975;VQSLOD=3.5270;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:90.21:0,90,1147	0/0:20,1:21:51.17:0,51,662	0/0:40,0:30:54:0,54,586	0/0:58,0:40:77.29:0,77,965	0/0:44,0:44:99:0,108,1371	1/1:1,13:15:33.11:554,33,0	1/1:2,22:25:39.13:656,39,0	0/0:53,0:52:99:0,129,1664	1/1:6,25:33:39.01:777,39,0	0/0:57,0:56:99:0,150,1846	0/0:31,0:30:75.24:0,75,967	0/0:50,0:50:99:0,129,1659	0/0:53,1:54:84.57:0,85,1634	1/1:5,26:31:62.58:1010,63,0	1/1:4,29:33:63.22:1053,63,0	0/0:47,0:47:99:0,126,1617	0/0:30,0:30:57.36:0,57,845	0/0:42,0:41:89.05:0,89,1286	0/0:19,0:19:45.13:0,45,562	0/0:42,0:42:99:0,111,1421	0/0:69,0:68:99:0,175,2229	1/1:18,3:21:6.02:100,6,0	1/1:3,15:18:36.12:608,36,0	1/1:6,28:34:27.33:499,27,0	1/1:2,15:18:43.39:714,43,0	0/0:42,0:42:99:0,108,1346	0/0:41,0:41:99:0,105,1343	0/0:19,0:18:39.12:0,39,506
chr10	102444996	.	T	TCC	3682.16	PASS	AB=0.866;AC=11;AF=0.196;AN=56;BaseQRankSum=17.144;DP=1155;FS=141.222;HRun=0;HaplotypeScore=496.2919;InbreedingCoeff=-0.2431;MQ=42.17;MQ0=14;MQRankSum=-14.001;QD=8.02;ReadPosRankSum=1.523;VQSLOD=0.2559;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:51.35:0,51,715	0/1:18,5:23:99:154,0,361	0/0:45,0:19:40.95:0,41,726	0/0:35,0:25:58.75:0,59,784	0/1:38,15:53:99:497,0,617	0/1:16,1:17:7.35:7,0,291	0/0:33,0:33:77.51:0,78,1157	0/0:70,0:70:99:0,171,2764	0/0:49,1:50:51.25:0,51,1560	0/1:74,6:80:99:156,0,1952	0/1:32,4:36:99:263,0,803	0/0:32,0:32:63.16:0,63,1080	0/0:45,1:46:36.49:0,36,1475	0/0:36,0:36:73.53:0,74,1132	0/0:61,0:61:99:0,123,1772	0/0:46,0:46:56.72:0,57,1062	0/0:22,1:22:43.25:0,43,666	0/0:27,1:27:19.86:0,20,944	0/0:27,0:26:72.40:0,72,1068	0/1:49,10:59:99:474,0,970	0/0:51,0:51:99:0,112,1707	0/1:45,11:56:99:1073,0,820	0/1:30,7:37:99:718,0,391	0/0:47,0:47:74.21:0,74,1000	0/1:30,2:32:99:163,0,736	0/1:48,5:53:16.59:17,0,1539	0/0:29,2:31:8.79:0,9,590	0/1:9,4:13:99:161,0,352
chr10	102445018	.	C	CTG	1209.62	PASS	AB=0.879;AC=12;AF=0.214;AN=56;BaseQRankSum=12.432;DP=954;FS=38.903;HRun=0;HaplotypeScore=395.5203;InbreedingCoeff=-0.2564;MQ=40.90;MQ0=8;MQRankSum=-7.122;QD=2.70;ReadPosRankSum=2.859;VQSLOD=1.3043;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:26:37.76:0,38,586	0/1:10,5:15:57.07:57,0,278	0/0:27,0:14:36:0,36,534	0/0:22,0:15:36.12:0,36,556	0/1:38,7:45:74.35:74,0,587	0/1:17,0:17:2.93:3,0,275	0/0:25,1:26:25.22:0,25,909	0/0:71,0:70:99:0,127,2585	0/1:42,3:45:3.33:3,0,1270	0/1:47,8:55:99:479,0,1263	0/0:22,5:27:61.03:0,61,702	0/0:28,2:30:53.58:0,54,812	0/1:42,3:45:46.39:46,0,1173	0/0:40,2:42:25.81:0,26,1128	0/1:57,6:63:20.24:20,0,1608	0/0:52,5:57:83.77:0,84,1196	0/0:16,1:16:24.96:0,25,391	0/0:19,0:19:42.21:0,42,580	0/0:27,0:22:16.53:0,17,796	0/1:37,7:44:68.85:69,0,802	0/0:34,0:34:69.21:0,69,1071	0/0:32,1:33:13.09:0,13,550	0/1:15,3:18:71.07:71,0,214	0/0:35,1:36:48.94:0,49,767	0/1:17,5:22:69.06:69,0,499	0/1:46,1:47:99:178,0,1244	0/1:22,10:32:99:285,0,558	0/0:10,0:10:18.27:0,18,278
chr10	102445019	.	A	AAT	213.10	PASS	AB=0.884;AC=7;AF=0.125;AN=56;BaseQRankSum=9.209;DP=926;FS=14.939;HRun=0;HaplotypeScore=380.8105;InbreedingCoeff=-0.1409;MQ=40.94;MQ0=8;MQRankSum=-4.170;QD=1.06;ReadPosRankSum=1.490;VQSLOD=0.2335;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:40.85:0,41,584	0/1:12,2:14:45.45:45,0,250	0/0:27,0:14:23.30:0,23,499	0/0:20,0:13:33.11:0,33,507	0/0:32,12:44:53.06:0,53,609	0/0:16,1:17:8.70:0,9,301	0/0:26,0:26:57.61:0,58,924	0/0:70,0:69:99:0,192,2642	0/0:44,1:45:47.47:0,47,1284	0/1:51,2:53:99:106,0,1335	0/0:22,3:25:51.35:0,51,633	0/0:29,0:29:53.63:0,54,797	0/0:43,1:44:42.25:0,42,1135	0/0:42,0:42:55.66:0,56,1148	0/0:63,0:63:99:0,117,1743	0/0:57,0:57:38.14:0,38,1137	0/0:17,0:16:25.50:0,26,393	0/1:16,1:17:34.96:35,0,486	0/0:27,0:22:63.25:0,63,818	0/0:34,6:41:29:0,29,724	0/0:34,0:34:70.73:0,71,1090	0/1:22,8:30:38.77:39,0,410	0/0:11,4:15:16.88:0,17,210	0/0:36,0:36:50.02:0,50,813	0/0:19,1:20:8.89:0,9,482	0/1:43,2:45:4.84:5,0,1198	0/1:30,2:32:9.55:10,0,601	0/1:6,4:10:98.50:99,0,217
chr10	102447827	.	A	AACACAC	1970.07	PASS	AB=0.850;AC=22;AF=0.423;AN=52;BaseQRankSum=-1.746;DP=626;FS=6.164;HRun=0;HaplotypeScore=151.5429;InbreedingCoeff=0.5495;MQ=64.67;MQ0=12;MQRankSum=-3.480;QD=6.38;ReadPosRankSum=-1.733;VQSLOD=2.1126;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:35:1.93:2,0,248	0/0:11,0:11:15.05:0,15,281	./.	./.	0/0:19,0:19:20.66:0,21,327	1/1:15,7:30:8.53:200,9,0	1/1:26,6:41:9.50:217,10,0	0/0:13,0:17:7.48:0,7,88	0/1:10,6:18:41.05:416,0,41	0/0:11,0:13:11.17:0,11,164	0/0:11,0:11:18.53:0,19,341	0/0:18,0:22:10.46:0,10,577	0/0:18,0:16:27.08:0,27,469	1/1:15,5:24:6.02:135,6,0	1/1:20,3:27:9.03:217,9,0	0/0:21,0:23:39.13:0,39,753	1/1:10,5:23:0.71:92,1,0	1/1:7,1:17:9.03:216,9,0	0/0:12,0:18:19.83:0,20,220	0/0:4,0:13:24.08:0,24,354	0/0:17,0:18:13.77:0,14,164	1/1:4,6:12:9.02:191,9,0	1/1:13,0:13:12.04:286,12,0	0/1:19,0:29:52.38:68,0,52	1/1:7,3:13:3.01:97,3,0	0/1:23,0:23:12.32:12,0,130	0/0:22,0:25:23.77:0,24,465	0/0:21,0:22:41.35:0,41,739
chr10	102448407	.	CG	C	5576.52	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.736;DP=657;FS=0.685;HRun=5;HaplotypeScore=95.0356;InbreedingCoeff=0.9951;MQ=86.10;MQ0=0;MQRankSum=-1.197;QD=29.82;ReadPosRankSum=2.567;VQSLOD=5.0719;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,1909	0/0:11,0:11:33.11:0,33,451	0/0:27,0:27:56.96:0,57,691	0/0:15,1:16:39.10:0,39,461	0/0:28,0:28:81.25:0,81,1083	1/1:1,19:20:54.15:611,54,0	1/1:2,21:23:51.15:578,51,0	0/0:38,0:38:96.28:0,96,1263	1/1:0,23:23:66.19:748,66,0	0/0:32,0:32:84.27:0,84,1134	0/0:22,0:22:63.21:0,63,860	0/0:24,0:24:72.23:0,72,968	0/0:23,0:23:66.22:0,66,901	1/1:1,24:25:66.19:748,66,0	1/1:1,28:29:78.22:884,78,0	0/0:26,1:27:47.22:0,47,1017	0/0:32,0:32:90.21:0,90,1155	0/0:24,0:24:66.21:0,66,885	0/0:21,0:21:57.18:0,57,757	0/0:14,0:14:39.13:0,39,528	0/0:30,0:29:87.28:0,87,1170	1/1:1,15:16:39.11:442,39,0	1/1:1,16:17:45.13:510,45,0	1/1:1,18:19:48.14:544,48,0	1/1:0,15:15:45.13:510,45,0	0/0:27,0:27:72.21:0,72,940	0/0:21,0:21:60.20:0,60,820	0/0:4,0:4:12.04:0,12,164
chr10	102448998	.	G	GCTGGGAAGC	22179.32	PASS	AB=0.955;AC=19;AF=0.339;AN=56;BaseQRankSum=5.797;DP=662;FS=2.305;HRun=0;HaplotypeScore=208.9419;InbreedingCoeff=0.9194;MQ=83.42;MQ0=0;MQRankSum=-18.839;QD=95.60;ReadPosRankSum=-1.523;VQSLOD=4.4198;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,3342	0/0:7,0:7:21.07:0,21,584	0/0:25,0:25:69.23:0,69,1845	0/0:26,0:24:52.01:0,52,1344	0/0:17,0:17:48.16:0,48,1431	1/1:10,12:22:54.15:2362,54,0	1/1:18,11:29:81.25:3228,81,0	0/0:24,0:24:66.23:0,66,1964	1/1:13,8:21:60.17:2325,60,0	0/0:22,0:22:66.23:0,66,1964	0/0:17,0:17:48.16:0,48,1411	0/0:28,0:28:81.24:0,81,2237	0/0:33,0:33:96.27:0,96,2614	1/1:6,16:22:60.19:2548,60,0	1/1:12,18:30:75.24:3245,75,0	0/1:20,1:21:84.03:84,0,1554	0/0:41,0:41:99:0,117,3377	0/0:14,0:14:42.14:0,42,1223	0/0:23,0:23:60.21:0,60,1712	0/0:19,0:19:57.20:0,57,1641	0/0:23,0:23:66.20:0,66,1839	1/1:8,16:24:60.21:2470,60,0	1/1:7,15:22:48.16:1988,48,0	1/1:9,16:25:51.17:2262,51,0	1/1:7,9:16:45.07:1668,45,0	0/0:33,0:33:87.30:0,87,2529	0/0:27,0:27:75.26:0,75,2201	0/0:10,0:10:24.08:0,24,714
chr10	102449008	.	T	TC	11123.91	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=0.626;DP=675;FS=2.974;HRun=6;HaplotypeScore=125.9382;InbreedingCoeff=0.9989;MQ=88.51;MQ0=0;MQRankSum=-8.104;QD=30.56;ReadPosRankSum=-0.540;VQSLOD=3.0796;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,129,1252	0/0:7,0:7:21.03:0,21,206	0/0:32,0:32:50.92:0,51,617	0/0:24,0:24:58.66:0,59,552	0/0:16,0:16:42.09:0,42,428	1/1:1,15:16:42.04:488,42,0	1/1:3,21:24:53.86:595,54,0	1/1:3,25:28:72.12:843,72,0	1/1:0,19:19:51.16:622,51,0	0/0:25,0:25:69.12:0,69,690	0/0:15,0:15:42.10:0,42,428	0/0:29,0:29:72.12:0,72,724	0/0:34,0:34:93.19:0,93,940	1/1:1,21:22:54.16:643,54,0	1/1:0,28:28:78.15:922,78,0	0/0:20,1:21:24.40:0,24,537	0/0:42,0:42:99:0,114,1155	0/0:17,0:17:47.99:0,48,449	1/1:2,21:23:66.18:799,66,0	1/1:1,19:20:54.17:679,54,0	1/1:1,27:28:66.21:830,66,0	1/1:1,23:24:67.92:719,68,0	1/1:2,21:23:54.91:536,55,0	1/1:1,23:24:47.70:518,48,0	1/1:0,17:17:48.11:565,48,0	1/1:2,32:34:96.24:1163,96,0	1/1:1,23:25:72.23:902,72,0	1/1:0,9:9:24.08:301,24,0
chr10	102449551	.	A	ATTCTT	1487.03	PASS	AC=10;AF=0.357;AN=28;BaseQRankSum=-5.266;DP=544;FS=7.963;HRun=0;HaplotypeScore=107.2651;InbreedingCoeff=0.6837;MQ=67.00;MQ0=12;MQRankSum=2.497;QD=12.71;ReadPosRankSum=-1.950;VQSLOD=1.3784;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:21.07:0,21,361	0/0:4,0:4:8.98:0,9,95	./.	./.	1/1:24,3:27:5.97:101,6,0	./.	./.	./.	./.	1/1:16,10:26:31.08:684,31,0	1/1:15,6:21:15.05:317,15,0	1/1:18,3:21:12:264,12,0	1/1:17,4:22:9.03:244,9,0	./.	0/0:13,0:16:3.01:0,3,35	0/0:17,0:17:18.06:0,18,310	./.	0/0:19,0:19:3.01:0,3,35	./.	0/0:17,0:27:11.84:0,12,139	./.	./.	./.	./.	./.	0/0:18,0:19:3.01:0,3,35	0/0:13,0:15:6.02:0,6,70	0/0:16,0:18:3.01:0,3,35
chr10	102449579	.	CTTTTCTTTTCT	C	1055.90	PASS	AB=0.948;AC=15;AF=0.313;AN=48;BaseQRankSum=5.774;DP=418;FS=9.141;HRun=0;HaplotypeScore=115.0732;InbreedingCoeff=0.2362;MQ=46.14;MQ0=51;MQRankSum=-1.216;QD=7.82;ReadPosRankSum=-0.884;VQSLOD=1.6670;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:27:69.23:0,69,2610	0/0:8,0:8:21.07:0,21,682	0/0:14,0:4:7.27:0,7,83	0/0:30,0:3:5.94:0,6,43	0/0:34,0:34:73.27:0,73,2153	./.	0/0:3,0:2:0:0,0,0	0/0:26,0:21:60.19:0,60,821	./.	0/0:25,0:23:69.23:0,69,2421	0/0:27,0:25:66.22:0,66,1852	0/0:16,0:16:36.12:0,36,1218	0/0:21,0:20:42.14:0,42,1249	./.	1/1:4,0:3:3.01:77,3,0	0/0:13,0:13:36.12:0,36,1389	0/1:20,0:24:78.70:632,0,79	1/1:5,15:18:3.01:106,3,0	0/0:21,0:11:30.10:0,30,417	0/1:26,0:25:99:205,0,689	0/0:8,0:6:12:0,12,246	1/1:2,0:2:1.72:4,2,0	1/1:1,0:1:1.25:3,1,0	./.	1/1:1,0:1:1.25:3,1,0	0/1:21,0:20:16.97:17,0,635	0/1:16,0:13:99:101,0,381	0/1:13,0:13:38.07:38,0,366
chr10	102449589	.	CT	C	205.59	PASS	AB=0.727;AC=5;AF=0.139;AN=36;BaseQRankSum=6.344;DP=387;FS=5.240;HRun=4;HaplotypeScore=65.9324;InbreedingCoeff=0.5243;MQ=45.05;MQ0=53;MQRankSum=-4.284;QD=3.61;ReadPosRankSum=2.410;VQSLOD=-0.2108;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:27:57.65:0,58,781	0/0:9,0:9:24.08:0,24,328	./.	./.	0/0:36,0:35:65.45:0,65,854	./.	./.	0/0:26,0:21:57.17:0,57,748	./.	0/0:25,0:24:63.12:0,63,780	0/0:24,0:22:63.18:0,63,847	0/0:14,0:14:36.08:0,36,453	0/0:21,0:20:42.09:0,42,515	./.	1/1:4,0:3:2.22:7,2,0	0/0:15,0:15:36.10:0,36,486	0/1:20,12:23:99:274,0,304	1/1:21,0:18:2.90:16,3,0	0/0:19,0:11:24.03:0,24,296	0/0:24,0:23:45.27:0,45,693	0/0:7,0:5:12:0,12,145	./.	./.	./.	./.	0/0:19,0:18:48.93:0,49,652	0/0:15,0:12:24.24:0,24,349	0/0:10,0:10:18.81:0,19,245
chr10	102450942	.	C	CT	2032.86	PASS	AB=0.818;AC=20;AF=0.357;AN=56;BaseQRankSum=-3.710;DP=622;FS=3.777;HRun=13;HaplotypeScore=78.8903;InbreedingCoeff=0.5245;MQ=69.14;MQ0=0;MQRankSum=-2.586;QD=7.56;ReadPosRankSum=0.242;VQSLOD=2.8479;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:61,1:64:99:0,115,905	0/0:9,0:10:22.82:0,23,150	0/0:17,0:15:3.89:0,4,46	0/0:15,0:14:3.43:0,3,47	0/0:19,0:19:28.32:0,28,201	0/1:2,13:15:2.11:267,0,2	1/1:5,14:20:17.07:290,17,0	0/0:25,2:29:13.57:0,14,214	1/1:6,10:18:17.35:132,17,0	0/0:19,0:19:32.49:0,32,226	0/0:12,0:12:23.70:0,24,164	0/1:18,2:20:17.74:18,0,187	0/0:19,0:19:22.81:0,23,163	1/1:6,15:22:17.12:180,17,0	0/1:8,13:22:3.31:239,0,3	0/0:18,1:20:15.28:0,15,244	0/1:25,2:32:15.46:15,0,274	0/0:23,0:24:58.42:0,58,390	0/0:23,1:28:14.69:0,15,230	0/0:21,1:23:15.72:0,16,241	0/1:20,3:25:19.02:19,0,159	1/1:2,12:15:20.81:173,21,0	1/1:7,12:20:9.04:244,9,0	1/1:4,19:24:38.88:349,39,0	1/1:10,17:27:1.36:293,1,0	0/0:23,0:23:32.57:0,33,226	0/0:27,0:27:44.34:0,44,304	0/1:9,0:9:1.21:1,0,117
chr10	102452572	.	A	AG	6870.03	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-15.137;DP=682;FS=6.780;HRun=6;HaplotypeScore=66.1763;InbreedingCoeff=0.9973;MQ=80.40;MQ0=0;MQRankSum=-2.063;QD=30.40;ReadPosRankSum=2.921;VQSLOD=5.5562;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,114,1162	0/0:17,0:17:51.11:0,51,520	0/0:22,0:22:57.10:0,57,563	0/0:15,0:15:35.45:0,35,361	0/0:23,0:23:69.16:0,69,703	1/1:1,25:26:69.22:868,69,0	1/1:1,16:17:39.12:491,39,0	0/0:24,0:24:48.08:0,48,476	1/1:3,29:32:66.21:830,66,0	0/0:32,0:32:90.19:0,90,914	0/0:8,0:8:15.03:0,15,153	0/0:32,0:32:93.21:0,93,948	0/0:30,0:30:84.18:0,84,856	1/1:1,24:25:69.21:855,69,0	1/1:1,32:33:84.27:1057,84,0	0/0:18,0:18:42.08:0,42,422	0/0:33,0:33:87.18:0,87,879	0/0:12,0:12:33.06:0,33,337	0/0:16,0:16:36.08:0,36,367	0/0:37,0:37:99:0,105,1051	0/0:32,0:32:60.33:0,60,773	1/1:2,28:30:72.16:885,72,0	1/1:2,17:19:45.14:563,45,0	1/1:1,21:22:54.17:679,54,0	1/1:1,21:22:51.16:642,51,0	0/0:24,0:24:60.09:0,60,611	0/0:26,0:25:78.18:0,78,795	0/0:11,0:11:30.07:0,30,306
chr10	102453855	.	C	CACAA	3043.68	PASS	AB=0.943;AC=15;AF=0.268;AN=56;BaseQRankSum=2.947;DP=532;FS=2.322;HRun=0;HaplotypeScore=125.1768;InbreedingCoeff=0.8479;MQ=54.19;MQ0=4;MQRankSum=-2.885;QD=17.29;ReadPosRankSum=-5.617;VQSLOD=2.5333;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:31,1:32:26.15:421,0,26	0/0:8,0:8:12:0,12,140	0/0:15,0:11:33.03:0,33,330	0/0:20,0:10:9.28:0,9,157	0/0:14,0:14:13.39:0,13,331	0/0:15,0:15:4.52:0,5,261	0/0:25,0:25:45.39:0,45,479	1/1:34,0:34:75.18:632,75,0	0/0:30,0:30:62.39:0,62,664	0/0:14,0:13:13.65:0,14,241	0/0:7,0:7:13.73:0,14,148	0/0:17,0:17:44.67:0,45,562	0/0:23,0:23:43.29:0,43,399	0/0:17,0:17:38.75:0,39,364	0/0:30,0:30:56.13:0,56,628	0/0:18,0:18:38.23:0,38,304	0/0:24,0:24:59.56:0,60,615	0/0:14,0:14:22.76:0,23,332	1/1:9,0:9:23.93:196,24,0	1/1:3,5:8:17.74:107,18,0	1/1:42,0:42:73.15:641,73,0	0/0:13,0:13:21.89:0,22,247	0/0:13,0:13:17.96:0,18,145	0/0:33,0:33:74.66:0,75,793	0/0:6,0:6:8.92:0,9,108	1/1:26,0:26:28.93:537,29,0	1/1:9,0:9:24.51:305,25,0	1/1:14,0:14:41.98:402,42,0
chr10	102454003	.	AG	A	6534.72	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=13.888;DP=642;FS=25.718;HRun=2;HaplotypeScore=87.9359;InbreedingCoeff=0.4143;MQ=80.35;MQ0=0;MQRankSum=-0.302;QD=16.80;ReadPosRankSum=2.364;VQSLOD=3.6197;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:75.24:971,75,0	0/0:11,0:11:33.11:0,33,492	0/0:30,0:29:72.66:0,73,872	0/0:16,0:17:28.40:0,28,445	0/0:22,0:22:66.19:0,66,929	0/1:31,0:31:29.06:60,0,29	0/1:26,0:26:32.73:33,0,87	1/1:0,28:28:78.23:985,78,0	0/1:24,0:24:28.89:29,0,45	0/0:27,0:27:81.26:0,81,1174	0/0:20,0:20:60.17:0,60,855	0/0:24,0:24:72.24:0,72,1057	0/0:22,0:22:63.20:0,63,922	0/1:22,0:22:14.20:56,0,14	1/1:21,0:21:4.68:51,5,0	0/0:29,0:29:81.25:0,81,1170	0/0:34,0:34:96.30:0,96,1394	0/0:17,0:17:51.07:0,51,673	1/1:2,16:18:48.09:563,48,0	1/1:1,28:29:77.96:893,78,0	1/1:0,21:21:57.19:738,57,0	0/1:25,0:25:45.87:46,0,52	0/1:20,0:20:42.73:43,0,64	0/1:25,0:25:16.39:42,0,16	0/1:14,0:14:13.12:13,0,30	1/1:0,28:28:84.23:1043,84,0	1/1:0,17:17:45.15:582,45,0	1/1:0,11:11:30.10:388,30,0
chr10	102454005	.	GA	G	6681.19	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=14.823;DP=645;FS=3.085;HRun=8;HaplotypeScore=86.6171;InbreedingCoeff=0.9253;MQ=79.18;MQ0=0;MQRankSum=0.578;QD=17.18;ReadPosRankSum=0.944;VQSLOD=4.9184;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:30.56:286,31,0	0/0:12,0:12:36.08:0,36,420	0/0:29,0:28:48.08:0,48,542	0/0:17,0:17:20.63:0,21,315	0/0:21,0:21:60.18:0,60,724	1/1:2,28:30:81.13:782,81,0	1/1:5,22:27:63.09:608,63,0	0/1:31,0:31:28.50:192,0,29	1/1:3,21:24:60.09:579,60,0	0/0:26,0:26:75.23:0,75,906	0/0:23,0:23:63.16:0,63,728	0/0:24,0:24:69.20:0,69,822	0/0:22,0:23:63.06:0,63,739	1/1:2,20:22:54.09:521,54,0	1/1:1,18:19:51.08:492,51,0	0/0:29,0:29:81.19:0,81,950	0/0:35,0:35:99:0,99,1161	0/0:17,0:17:39.12:0,39,471	1/1:16,0:16:30.66:124,31,0	1/1:28,0:28:38.45:253,38,0	1/1:22,0:22:32.31:223,32,0	1/1:3,22:25:63.10:608,63,0	1/1:3,16:19:42.06:405,42,0	1/1:2,22:24:66.10:637,66,0	1/1:2,12:14:36.06:348,36,0	1/1:29,0:29:44.69:275,45,0	1/1:17,0:17:42.70:211,43,0	1/1:11,0:11:28.23:134,28,0
chr10	102454327	.	CT	C	9319.31	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.031;DP=794;FS=1.246;HRun=1;HaplotypeScore=75.6286;InbreedingCoeff=1.0000;MQ=88.27;MQ0=0;MQRankSum=-3.544;QD=38.04;ReadPosRankSum=2.876;VQSLOD=5.5661;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,150,2364	0/0:20,0:20:60.15:0,60,930	0/0:29,0:29:87.26:0,87,1321	0/0:28,0:28:84.26:0,84,1298	0/0:32,0:32:93.30:0,93,1457	1/1:0,23:23:60.20:839,60,0	1/1:1,34:35:93.27:1278,93,0	0/0:21,0:21:63.21:0,63,986	1/1:0,29:29:81.27:1132,81,0	0/0:45,0:45:99:0,126,1991	0/0:17,0:17:51.17:0,51,811	0/0:20,0:20:57.19:0,57,899	0/0:41,0:41:99:0,123,1955	1/1:0,40:40:99:1416,102,0	1/1:0,29:29:81.27:1133,81,0	0/0:25,1:26:36.14:0,36,1074	0/0:36,0:36:99:0,108,1697	0/0:19,0:19:57.06:0,57,809	0/0:22,0:22:66.18:0,66,998	0/0:20,0:20:57.18:0,57,882	0/0:47,0:47:99:0,141,2222	1/1:0,21:21:60.20:839,60,0	1/1:0,15:15:39.10:545,39,0	1/1:0,29:29:81.27:1133,81,0	1/1:0,24:24:72.24:1006,72,0	0/0:32,0:32:96.32:0,96,1513	0/0:29,0:29:87.30:0,87,1383	0/0:14,0:14:42.13:0,42,647
chr10	102454788	.	AGTGATGATC	A	11478.88	PASS	AB=0.515;AC=15;AF=0.268;AN=56;BaseQRankSum=16.864;DP=920;FS=0.660;HRun=0;HaplotypeScore=283.3628;InbreedingCoeff=0.9088;MQ=79.07;MQ0=0;MQRankSum=-12.998;QD=45.55;ReadPosRankSum=-3.734;VQSLOD=3.5446;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,43:47:77.76:2008,78,0	0/0:11,0:11:27.04:0,27,989	0/0:25,0:24:50.21:0,50,1870	0/0:54,0:54:99:0,135,4684	0/0:24,0:24:69.13:0,69,2738	0/0:23,0:23:57.20:0,57,2124	0/0:32,0:32:78.25:0,78,2952	1/1:10,27:37:80.97:1378,81,0	0/0:44,0:44:99:0,102,3860	0/0:30,0:30:72.16:0,72,2677	0/0:18,0:18:54.11:0,54,2119	0/0:46,0:46:99:0,126,5470	0/0:45,0:45:99:0,120,5106	0/0:45,0:45:99:0,111,4059	0/0:42,0:42:99:0,102,3820	0/0:38,0:38:99:0,99,4280	0/0:30,0:30:75.26:0,75,2885	0/0:31,0:31:78.27:0,78,2879	1/1:6,19:25:53.91:1064,54,0	1/1:5,24:29:56.95:1189,57,0	1/1:4,29:33:45.15:1080,45,0	0/0:31,0:31:75.22:0,75,2727	0/0:17,0:17:45.15:0,45,1493	0/0:54,0:54:99:0,144,5422	0/0:28,0:28:72.25:0,72,2635	0/1:2,32:34:51.84:2023,0,52	1/1:3,25:28:54.19:1589,54,0	1/1:2,17:19:39.13:1147,39,0
chr10	102455036	.	G	GA	5762.94	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-14.283;DP=677;FS=0.685;HRun=8;HaplotypeScore=66.4948;InbreedingCoeff=0.9995;MQ=81.73;MQ0=0;MQRankSum=-1.857;QD=26.20;ReadPosRankSum=2.116;VQSLOD=5.6503;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:65.51:0,66,580	0/0:8,0:8:24.01:0,24,219	0/0:30,0:30:58.01:0,58,542	0/0:18,0:18:37.79:0,38,327	0/0:26,0:27:73.44:0,73,646	1/1:5,29:34:32.34:880,32,0	1/1:3,21:24:54.16:623,54,0	0/0:42,0:42:92.90:0,93,823	1/1:5,16:21:45.13:519,45,0	0/0:33,0:33:90:0,90,811	0/0:20,0:20:50.99:0,51,462	0/0:21,0:21:54.01:0,54,490	0/0:16,0:16:39.01:0,39,357	1/1:3,15:18:45.13:519,45,0	1/1:2,20:23:57:638,57,0	0/0:24,1:25:34.40:0,34,565	0/0:23,0:23:63.03:0,63,576	0/0:12,0:13:35:0,35,295	0/0:24,0:24:63:0,63,569	0/0:40,0:40:70.59:0,71,817	0/0:20,0:20:54.03:0,54,494	1/1:5,25:30:38.69:685,39,0	1/1:2,17:20:47.77:553,48,0	1/1:1,16:17:39.12:450,39,0	1/1:5,27:33:80.97:896,81,0	0/0:27,0:27:77.47:0,77,684	0/0:31,0:31:84.02:0,84,762	0/0:14,0:14:39.01:0,39,357
chr10	102455702	.	T	TG	1346.19	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=15.580;DP=572;FS=2.262;HRun=2;HaplotypeScore=126.3984;InbreedingCoeff=0.8674;MQ=81.65;MQ0=0;MQRankSum=-15.589;QD=6.98;ReadPosRankSum=0.135;VQSLOD=0.8076;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:38:63.93:330,64,0	0/0:10,0:10:27.08:0,27,335	0/0:16,0:16:39.09:0,39,459	0/0:21,0:21:55.36:0,55,640	0/0:29,0:29:84.26:0,84,1041	0/0:26,0:26:75.21:0,75,906	0/0:14,0:14:39.12:0,39,484	0/1:23,0:23:8.17:131,0,8	0/0:25,0:25:75.24:0,75,930	0/0:27,0:27:78.24:0,78,953	0/0:28,0:28:81.25:0,81,993	0/0:12,0:12:33.10:0,33,409	0/0:22,0:22:63.20:0,63,779	0/0:14,0:14:42.13:0,42,520	0/0:28,0:28:81.24:0,81,990	0/0:12,0:12:36.11:0,36,446	1/1:12,0:12:22.83:115,23,0	1/1:11,0:11:4.45:46,4,0	1/1:21,0:21:19.91:105,20,0	1/1:18,5:23:42.15:218,42,0	1/1:15,0:15:17.02:97,17,0	0/0:24,0:24:72.19:0,72,855	0/0:29,0:29:87.21:0,87,1037	0/0:17,0:17:48.15:0,48,595	0/0:25,0:25:75.24:0,75,929	1/1:23,0:23:0.66:190,1,0	1/1:18,0:18:39.85:205,40,0	1/1:9,0:9:22.72:113,23,0
chr10	102455703	.	G	GGGTT	12053.52	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.923;DP=572;FS=4.075;HRun=0;HaplotypeScore=136.0081;InbreedingCoeff=0.9610;MQ=81.71;MQ0=0;MQRankSum=-17.626;QD=63.44;ReadPosRankSum=-2.969;VQSLOD=5.7559;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,22:38:90.24:2264,90,0	0/0:10,0:10:27.09:0,27,539	0/0:15,0:15:45.12:0,45,806	0/0:22,0:22:57.15:0,57,1044	0/0:30,0:30:84.29:0,84,1677	0/0:27,0:27:75.26:0,75,1478	0/0:14,0:14:39.13:0,39,779	1/1:14,9:23:66.15:1605,66,0	0/0:25,0:25:75.26:0,75,1488	0/0:27,0:27:81.08:0,81,1492	0/0:27,0:27:81.27:0,81,1574	0/0:12,0:12:33.11:0,33,659	0/0:22,0:22:63.21:0,63,1197	0/0:14,0:14:42.14:0,42,838	0/0:28,0:28:81.25:0,81,1548	0/0:12,0:12:36.12:0,36,719	1/1:5,7:12:30.10:807,30,0	1/1:5,5:10:27.04:636,27,0	1/1:15,6:21:48.15:1224,48,0	1/1:10,13:23:57.20:1459,57,0	1/1:7,7:14:27.09:669,27,0	0/0:24,0:24:72.21:0,72,1347	0/0:29,0:29:87.28:0,87,1678	0/0:17,0:17:51.16:0,51,973	0/0:27,0:27:75.26:0,75,1497	1/1:4,18:22:0.25:1398,0,0	1/1:1,14:18:48.03:1256,48,0	1/1:1,8:9:27.09:735,27,0
chr10	102455707	.	CAT	C	5558.75	PASS	AB=0.512;AC=19;AF=0.339;AN=56;BaseQRankSum=16.571;DP=526;FS=2.675;HRun=0;HaplotypeScore=111.5740;InbreedingCoeff=0.9526;MQ=86.11;MQ0=0;MQRankSum=-15.384;QD=40.28;ReadPosRankSum=-0.843;VQSLOD=6.2875;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:72.24:1076,72,0	0/0:11,0:11:33.11:0,33,629	0/0:19,0:19:57.05:0,57,955	0/0:20,0:20:52.67:0,53,1022	0/0:29,0:29:87.30:0,87,1755	0/0:26,0:26:78.27:0,78,1525	0/0:14,0:14:42.14:0,42,842	1/1:0,22:22:66.14:947,66,0	0/0:25,0:25:75.24:0,75,1485	0/0:28,0:28:84.29:0,84,1687	0/0:26,0:26:78.25:0,78,1514	0/0:15,0:15:45.13:0,45,842	0/0:21,0:21:63.22:0,63,1280	0/0:16,0:16:48.16:0,48,974	0/0:27,0:27:81.28:0,81,1623	0/0:14,0:14:42.13:0,42,806	1/1:0,7:7:21.07:316,21,0	1/1:0,6:6:18.06:285,18,0	1/1:0,8:8:18.06:283,18,0	1/1:3,14:17:48.07:628,48,0	1/1:1,8:9:18.53:264,19,0	0/0:23,0:23:69.21:0,69,1329	0/0:26,0:26:78.27:0,78,1583	0/0:19,0:19:57.14:0,57,1046	0/0:29,0:29:87.27:0,87,1695	0/1:1,20:21:0.78:783,0,1	1/1:0,14:14:42.14:604,42,0	1/1:0,8:8:24.08:373,24,0
chr10	102456602	.	CTCTCTCTCTCTT	C	2115.18	PASS	AB=0.950;AC=27;AF=0.482;AN=56;BaseQRankSum=4.868;DP=453;FS=2.554;HRun=0;HaplotypeScore=135.3164;InbreedingCoeff=0.3133;MQ=43.18;MQ0=37;MQRankSum=-1.605;QD=7.27;ReadPosRankSum=-1.870;VQSLOD=2.4675;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:7.74:0,8,65	0/0:7,0:7:18.05:0,18,608	0/0:21,0:1:3:0,3,26	0/0:31,0:3:5.44:0,5,27	0/0:15,0:15:21.91:0,22,337	1/1:14,0:13:35.79:389,36,0	1/1:29,0:27:29.02:512,29,0	0/1:20,0:16:43:43,0,75	1/1:6,18:22:2.95:109,3,0	0/0:13,0:12:26.12:0,26,350	0/0:8,0:8:8.40:0,8,160	0/0:15,0:15:35.68:0,36,1063	0/0:11,0:10:14.17:0,14,490	0/1:6,7:13:10.05:97,0,10	1/1:3,13:15:0.66:280,1,0	0/1:10,0:9:8.77:9,0,507	0/1:15,0:14:35.87:36,0,109	0/1:19,0:17:10.38:10,0,83	0/1:11,0:10:36.26:36,0,62	0/0:16,0:15:8.09:0,8,105	0/0:7,0:5:1.36:0,1,3	1/1:21,0:20:13.50:88,14,0	1/1:8,0:7:9.25:96,9,0	1/1:28,1:28:14.22:220,14,0	1/1:18,0:16:34.18:265,34,0	0/1:21,0:20:51.27:51,0,83	1/1:6,0:6:5.75:32,6,0	1/1:16,0:12:2.78:24,3,0
chr10	102456614	.	T	TTC	2207.87	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=1.760;DP=430;FS=6.154;HRun=0;HaplotypeScore=97.9609;InbreedingCoeff=0.4005;MQ=44.76;MQ0=24;MQRankSum=-1.557;QD=7.38;ReadPosRankSum=-1.829;VQSLOD=2.1432;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:15:6.94:9,0,7	0/0:8,0:8:17.50:0,17,210	0/0:18,0:1:3.01:0,3,37	0/0:32,0:7:11.94:0,12,124	0/0:12,0:12:23.84:0,24,264	1/1:18,0:17:36.89:501,37,0	1/1:26,0:24:11.01:604,11,0	1/1:20,0:14:6.20:44,6,0	0/1:21,0:20:0:1,0,0	0/0:12,0:11:0.27:0,0,167	0/0:10,0:10:16.88:0,17,188	0/0:17,0:17:36.13:0,36,417	0/0:10,0:9:18.44:0,18,183	1/1:12,0:12:2.96:24,3,0	1/1:16,0:15:3.03:17,3,0	0/1:10,0:9:15.79:16,0,179	0/0:12,0:11:3.70:0,4,10	1/1:15,0:15:6.80:58,7,0	1/1:12,0:11:6.62:71,7,0	1/1:10,0:10:3:27,3,0	0/1:6,0:4:0:0,0,0	1/1:21,0:21:12.41:146,12,0	0/1:10,0:10:3.58:223,0,4	1/1:10,20:29:3.01:36,3,0	1/1:21,0:19:33.11:493,33,0	0/1:15,0:15:30.17:92,0,30	0/1:5,0:5:4.77:5,0,5	1/1:14,0:9:1.10:8,1,0
chr10	102456628	.	CCCT	C	404.97	PASS	AB=0.795;AC=9;AF=0.167;AN=54;BaseQRankSum=7.144;DP=446;FS=26.674;HRun=0;HaplotypeScore=103.1913;InbreedingCoeff=0.2748;MQ=47.46;MQ0=17;MQRankSum=-7.218;QD=3.93;ReadPosRankSum=1.248;VQSLOD=0.2761;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,3:15:17.41:53,0,17	0/0:10,0:10:27.09:0,27,576	0/0:21,0:4:12.04:0,12,271	0/0:42,0:13:16.94:0,17,589	0/0:10,0:10:30.08:0,30,652	0/0:16,0:16:22.87:0,23,743	0/0:22,0:22:56.95:0,57,1014	0/1:14,5:13:0.98:64,0,1	0/0:20,0:19:6.02:0,6,99	0/0:10,0:9:20.96:0,21,431	0/0:12,0:12:30.09:0,30,630	0/0:17,0:17:45.02:0,45,959	0/0:9,0:9:27.09:0,27,539	0/0:15,0:15:27.05:0,27,522	0/0:21,0:21:29.98:0,30,568	0/0:17,0:17:50.76:0,51,986	1/1:8,3:10:7.77:91,8,0	0/1:13,2:15:6.78:81,0,7	0/1:8,3:11:7.34:32,0,7	0/0:4,5:9:2.26:0,2,8	./.	0/0:28,0:28:38.73:0,39,671	0/0:14,0:14:32.71:0,33,656	0/0:29,0:29:15.52:0,16,297	0/0:18,0:16:38.76:0,39,664	0/1:11,5:16:64.65:120,0,65	0/1:4,2:6:5.97:48,0,6	0/1:6,3:6:1.55:55,0,2
chr10	102456629	.	CCT	C	1555.62	PASS	AB=0.764;AC=16;AF=0.296;AN=54;BaseQRankSum=8.791;DP=443;FS=13.715;HRun=0;HaplotypeScore=93.0050;InbreedingCoeff=0.7608;MQ=47.78;MQ0=17;MQRankSum=-9.225;QD=14.40;ReadPosRankSum=-1.242;VQSLOD=2.5422;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,6:15:7.04:69,0,7	0/0:10,0:10:26.96:0,27,406	0/0:21,0:4:12.04:0,12,215	0/0:43,0:14:17.72:0,18,451	0/0:11,0:11:30.09:0,30,513	0/0:16,0:16:44.86:0,45,658	0/0:22,0:22:57.02:0,57,833	1/1:14,5:13:34.47:305,34,0	0/0:20,0:19:6:0,6,72	0/0:9,0:8:18.06:0,18,321	0/0:11,0:11:29.13:0,29,467	0/0:17,0:17:41.35:0,41,712	0/0:9,0:9:24.06:0,24,370	0/0:15,0:15:27.07:0,27,401	0/0:21,0:21:5.44:0,5,400	0/0:17,0:17:33.62:0,34,694	1/1:4,4:7:12.04:148,12,0	1/1:13,1:15:9.42:259,9,0	1/1:6,4:10:23.39:203,23,0	1/1:5,4:9:15.04:171,15,0	./.	0/0:29,0:29:28.92:0,29,500	0/0:14,0:14:32.41:0,32,529	0/0:29,0:29:14.98:0,15,209	0/0:18,0:17:42.05:0,42,635	0/1:12,4:16:24.87:334,0,25	1/1:4,2:6:14.63:152,15,0	1/1:6,3:6:9.02:105,9,0
chr10	102456953	.	T	TC	12712.78	PASS	AB=0.564;AC=19;AF=0.339;AN=56;BaseQRankSum=20.680;DP=806;FS=0.000;HRun=1;HaplotypeScore=128.8254;InbreedingCoeff=0.9204;MQ=82.25;MQ0=0;MQRankSum=-4.544;QD=40.23;ReadPosRankSum=-1.736;VQSLOD=4.0520;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,49:51:99:2133,144,0	0/0:10,0:10:27.09:0,27,351	0/0:30,0:30:84.25:0,84,1072	0/0:15,0:15:41.70:0,42,489	0/0:29,0:29:84.27:0,84,1090	0/0:20,0:20:60.19:0,60,778	0/0:30,0:30:87.25:0,87,1101	1/1:4,35:39:99:1663,114,0	0/0:24,0:24:72.21:0,72,907	0/0:39,0:39:99:0,111,1427	0/0:16,0:16:48.16:0,48,622	0/0:30,0:30:90.29:0,90,1168	0/0:30,0:30:87.26:0,87,1113	0/0:29,0:29:87.28:0,87,1130	0/0:43,0:43:99:0,129,1675	0/0:32,0:32:93.30:0,93,1207	1/1:4,41:45:99:1844,123,0	1/1:1,16:17:45.15:674,45,0	1/1:4,22:27:75.18:1068,75,0	1/1:0,22:22:63.21:943,63,0	1/1:2,29:31:87.29:1304,87,0	0/0:29,0:29:84.27:0,84,1090	0/0:16,0:16:45.12:0,45,554	0/0:38,0:38:99:0,108,1400	0/0:30,0:30:71.77:0,72,935	0/1:7,24:31:23.68:1085,0,24	1/1:2,40:42:99:1573,105,0	1/1:0,10:10:30.07:426,30,0
chr10	102458771	.	TGAGAGAGAGAGAGAGA	T	2258.54	PASS	AB=0.788;AC=14;AF=0.250;AN=56;BaseQRankSum=-1.015;DP=633;FS=1.928;HRun=0;HaplotypeScore=232.5877;InbreedingCoeff=0.6357;MQ=62.48;MQ0=9;MQRankSum=1.713;QD=11.02;ReadPosRankSum=3.147;VQSLOD=2.7200;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:28:27.49:29,0,27	0/0:5,0:4:6.01:0,6,93	0/0:30,0:22:29.61:0,30,286	0/0:54,0:20:17.17:0,17,205	0/0:17,0:17:32.95:0,33,701	1/1:19,2:21:36.02:665,36,0	1/1:30,0:27:42.07:645,42,0	0/0:24,0:22:6.56:0,7,109	1/1:4,28:32:9.03:351,9,0	0/0:33,0:33:84.16:0,84,2330	0/0:12,0:15:18.03:0,18,349	0/0:26,0:28:57.18:0,57,2066	0/0:25,0:25:54.06:0,54,1361	0/0:4,12:16:2.80:0,3,13	1/1:15,1:16:8.69:205,9,0	0/0:20,0:20:57.15:0,57,2095	0/0:11,0:19:32.83:0,33,330	0/0:16,0:16:17.93:0,18,181	0/0:19,0:19:28.16:0,28,324	0/0:19,0:19:5.16:0,5,46	0/0:7,0:5:0.26:0,0,21	0/0:7,23:30:5.92:0,6,40	1/1:7,13:18:3.01:60,3,0	1/1:35,3:36:14.64:470,15,0	0/1:5,14:19:0:0,0,0	0/0:22,0:20:9.32:0,9,218	0/0:22,0:21:7.23:0,7,50	0/0:1,0:1:0:0,0,0
chr10	102458806	.	G	GAC	284.60	PASS	AB=0.979;AC=11;AF=0.196;AN=56;BaseQRankSum=4.274;DP=670;FS=0.000;HRun=0;HaplotypeScore=132.7801;InbreedingCoeff=0.4431;MQ=43.44;MQ0=42;MQRankSum=-2.030;QD=2.00;ReadPosRankSum=0.852;VQSLOD=2.2612;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,3:24:14.95:152,15,0	0/0:5,0:4:3:0,3,25	0/0:6,0:2:5.98:0,6,47	0/0:21,0:3:2.99:0,3,24	0/0:29,0:24:6.95:0,7,329	0/0:21,0:21:14.77:0,15,317	0/0:28,0:20:7.50:0,8,187	0/0:43,0:28:50.80:0,51,628	0/0:41,0:39:4.85:0,5,253	0/0:38,0:33:94.82:0,95,1060	0/0:17,0:15:17.99:0,18,171	0/0:28,0:28:66.61:0,67,865	0/0:21,0:21:51:0,51,719	0/0:22,0:22:12.03:0,12,162	0/0:18,0:18:15:0,15,318	0/0:34,0:31:75.19:0,75,1035	0/0:23,0:19:25.37:0,25,330	0/0:15,0:10:14.96:0,15,141	0/1:28,0:24:0.47:0,0,218	1/1:26,0:26:8.58:55,9,0	1/1:6,0:4:3:25,3,0	0/0:31,0:29:11.89:0,12,130	0/0:22,0:20:14.08:0,14,189	0/0:39,0:30:20.15:0,20,158	0/0:26,0:25:15.02:0,15,228	0/1:28,2:27:99:156,0,240	0/1:23,0:21:15.84:16,0,34	1/1:1,0:1:2.99:23,3,0
chr10	102458832	.	GAGAC	G	219.43	PASS	AB=0.950;AC=8;AF=0.167;AN=48;BaseQRankSum=7.553;DP=618;FS=36.768;HRun=0;HaplotypeScore=127.9033;InbreedingCoeff=0.2081;MQ=41.02;MQ0=53;MQRankSum=-6.097;QD=1.74;ReadPosRankSum=0.870;VQSLOD=0.4224;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,3:17:0:1,0,0	0/0:7,0:6:6.02:0,6,147	./.	./.	0/0:29,0:21:42.04:0,42,994	0/0:18,0:17:35.40:0,35,837	0/0:35,0:21:38.16:0,38,879	0/0:41,0:22:16.96:0,17,336	0/0:34,0:32:24.36:0,24,928	0/0:34,0:28:71.17:0,71,1467	0/0:15,0:10:15.05:0,15,372	0/0:26,0:25:52.06:0,52,1013	0/0:30,0:30:67:0,67,1396	0/0:24,0:23:20.82:0,21,526	0/0:25,0:25:30.10:0,30,745	0/0:35,0:32:81.10:0,81,1793	0/1:20,2:17:81.87:82,0,304	0/1:12,1:10:71.67:109,0,72	0/1:20,1:14:30.40:30,0,129	0/0:11,3:13:1.72:0,2,4	./.	0/0:32,0:27:18.06:0,18,464	0/0:18,0:16:12.04:0,12,323	0/0:40,0:32:27.03:0,27,469	0/0:30,0:29:27.07:0,27,603	0/1:28,0:23:64.67:65,0,137	1/1:17,2:17:5.47:50,5,0	./.
chr10	102458834	.	GAC	G	33.90	PASS	AB=0.939;AC=5;AF=0.104;AN=48;BaseQRankSum=6.374;DP=604;FS=0.000;HRun=0;HaplotypeScore=112.4609;InbreedingCoeff=0.2276;MQ=41.20;MQ0=51;MQRankSum=-3.890;QD=0.46;ReadPosRankSum=0.795;VQSLOD=2.0983;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:17:2.53:23,3,0	0/0:8,0:7:9.01:0,9,139	./.	./.	0/0:31,0:23:46.01:0,46,781	0/0:18,0:17:35.37:0,35,606	0/0:35,0:21:36.59:0,37,675	0/0:38,0:20:42.72:0,43,421	0/0:32,0:30:25.08:0,25,675	0/0:32,0:27:34.27:0,34,1054	0/0:13,0:9:15.05:0,15,286	0/0:28,0:27:56.61:0,57,835	0/0:29,0:29:46.38:0,46,1100	0/0:23,0:22:20.83:0,21,394	0/0:28,1:27:33.10:0,33,575	0/0:34,0:31:48.38:0,48,1300	0/0:20,2:17:18.31:0,18,267	0/1:11,1:9:51.67:74,0,52	0/1:21,0:14:20.76:21,0,277	0/0:14,0:13:1.72:0,2,3	./.	0/0:28,0:24:18.06:0,18,346	0/0:16,0:14:12.04:0,12,231	0/0:40,0:32:27.03:0,27,392	0/0:29,0:28:29.93:0,30,469	0/0:26,0:21:0.80:0,1,249	0/1:15,2:15:6.84:23,0,7	./.
chr10	102458842	.	GAC	G	152.59	PASS	AB=0.965;AC=7;AF=0.146;AN=48;BaseQRankSum=6.832;DP=586;FS=26.307;HRun=0;HaplotypeScore=106.5088;InbreedingCoeff=0.1808;MQ=42.00;MQ0=49;MQRankSum=-6.427;QD=1.39;ReadPosRankSum=1.725;VQSLOD=0.2432;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,2:15:0:0,0,0	0/0:10,0:9:15.02:0,15,222	./.	./.	0/0:30,0:21:48.16:0,48,915	0/0:19,0:18:38.61:0,39,662	0/0:41,0:27:54.58:0,55,866	0/1:26,1:11:29.80:30,0,49	0/0:24,0:22:37.48:0,37,697	0/0:35,0:29:80.96:0,81,1297	0/0:15,0:10:21.07:0,21,385	0/0:28,0:27:58.03:0,58,874	0/0:29,0:29:61.33:0,61,1262	0/0:22,0:20:20.83:0,21,404	0/0:33,0:31:45.12:0,45,776	0/0:35,0:32:60.17:0,60,1315	0/1:22,1:17:37.11:37,0,237	0/1:12,0:9:71.33:71,0,93	0/0:15,0:10:11.27:0,11,70	1/1:12,1:12:3.37:17,3,0	./.	0/0:26,0:22:18.06:0,18,341	0/0:14,0:13:12.04:0,12,210	0/0:43,0:35:42.12:0,42,730	0/0:29,0:28:39.08:0,39,650	0/1:17,2:15:48.92:111,0,49	0/1:16,0:14:3.28:4,0,3	./.
chr10	102458846	.	GAGAC	G	349.08	PASS	AB=0.954;AC=9;AF=0.188;AN=48;BaseQRankSum=7.974;DP=587;FS=30.695;HRun=0;HaplotypeScore=118.9569;InbreedingCoeff=0.2094;MQ=42.67;MQ0=47;MQRankSum=-7.864;QD=2.96;ReadPosRankSum=0.755;VQSLOD=0.5189;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,3:15:0:0,0,0	0/0:11,0:10:15:0,15,390	./.	./.	0/0:28,0:20:48.16:0,48,1261	0/0:19,0:18:38.43:0,38,913	0/0:42,0:29:59.23:0,59,1479	0/1:23,0:8:20:20,0,64	0/0:26,0:24:46.51:0,47,1089	0/0:33,0:27:70.69:0,71,1573	0/0:15,0:11:24.08:0,24,599	0/0:30,0:29:46.21:0,46,1187	0/0:32,0:32:79.56:0,80,1869	0/0:22,0:20:23.78:0,24,604	0/0:33,0:31:45.15:0,45,1162	0/0:35,0:32:76.44:0,76,1630	0/1:20,1:16:79.73:80,0,288	0/1:10,1:8:82.46:82,0,140	0/1:14,1:9:28.06:50,0,28	1/1:11,2:12:2.90:16,3,0	./.	0/0:27,0:22:24.07:0,24,508	0/0:14,0:12:15.04:0,15,309	0/0:43,0:35:45.15:0,45,1148	0/0:31,0:30:45.15:0,45,1087	0/1:18,0:15:44.80:159,0,45	1/1:14,2:14:4.90:72,5,0	./.
chr10	102458850	.	C	CAG	318.90	PASS	AB=0.940;AC=11;AF=0.229;AN=48;BaseQRankSum=7.826;DP=588;FS=14.092;HRun=0;HaplotypeScore=106.3287;InbreedingCoeff=0.3254;MQ=43.22;MQ0=49;MQRankSum=-7.795;QD=2.31;ReadPosRankSum=-1.454;VQSLOD=1.2967;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,1:16:0.01:0,0,0	0/0:11,0:10:15.04:0,15,195	./.	./.	0/0:27,0:19:45.15:0,45,585	0/0:22,0:20:4.47:0,4,416	0/0:43,0:30:56.92:0,57,759	1/1:22,0:8:12.02:81,12,0	0/0:25,0:23:48.14:0,48,608	0/0:34,0:29:43.71:0,44,730	0/0:18,0:14:33.09:0,33,411	0/0:28,0:27:42.40:0,42,598	0/0:30,0:31:70.01:0,70,936	0/0:21,0:19:26.93:0,27,335	0/0:34,0:32:45.14:0,45,579	0/0:34,0:31:65.21:0,65,798	0/1:17,2:15:38.90:39,0,138	0/1:11,0:8:24.14:24,0,64	1/1:15,1:8:1.94:95,2,0	1/1:9,3:12:1.25:3,1,0	./.	0/0:26,0:21:24.06:0,24,297	0/0:15,0:13:15.04:0,15,180	0/0:45,0:37:45.14:0,45,584	0/0:30,0:29:45.12:0,45,584	0/1:16,1:14:80.04:115,0,80	0/1:11,2:13:12.80:92,0,13	./.
chr10	102458860	.	C	CAG	143.01	PASS	AB=0.964;AC=8;AF=0.167;AN=48;BaseQRankSum=7.493;DP=584;FS=26.983;HRun=0;HaplotypeScore=94.4345;InbreedingCoeff=0.2832;MQ=43.95;MQ0=51;MQRankSum=-7.375;QD=1.14;ReadPosRankSum=-0.469;VQSLOD=0.0455;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:21,1:14:0.01:0,0,0	0/0:12,0:11:17.98:0,18,213	./.	./.	0/0:29,0:21:54.16:0,54,686	0/0:22,0:20:45.11:0,45,552	0/0:43,0:32:65.91:0,66,845	1/1:20,1:7:4.96:74,5,0	0/0:20,0:19:48.16:0,48,622	0/0:31,0:26:56.93:0,57,736	0/0:20,0:16:42.14:0,42,544	0/0:27,0:26:58.45:0,58,757	0/0:30,0:30:60.17:0,60,843	0/0:21,0:18:33.05:0,33,410	0/0:38,0:36:54.16:0,54,686	0/0:29,1:27:57.18:0,57,734	0/1:16,0:12:14.97:15,0,30	0/0:11,0:8:8.09:0,8,36	0/1:19,0:9:3.16:3,0,62	0/1:13,1:12:0:0,0,0	./.	0/0:22,0:17:24.08:0,24,312	0/0:13,0:11:21.03:0,21,254	0/0:51,0:43:69.17:0,69,843	0/0:32,0:31:51.12:0,51,644	0/1:14,2:13:13.23:143,0,13	0/1:14,0:12:12.81:18,0,13	./.
chr10	102458872	.	GA	G	134.98	PASS	AB=0.725;AC=2;AF=0.042;AN=48;BaseQRankSum=3.744;DP=601;FS=3.606;HRun=1;HaplotypeScore=76.4664;InbreedingCoeff=0.0981;MQ=45.25;MQ0=51;MQRankSum=-2.459;QD=5.19;ReadPosRankSum=0.723;VQSLOD=0.6356;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,1:14:3.89:0,4,35	0/0:18,0:15:26.97:0,27,404	./.	./.	0/0:31,0:24:60.20:0,60,948	0/0:19,0:18:41.83:0,42,670	0/0:39,4:32:70.77:0,71,1080	0/0:23,0:5:15.04:0,15,176	0/0:23,0:22:63.21:0,63,996	0/0:31,1:26:38.08:0,38,1136	0/0:22,0:18:48.16:0,48,756	0/0:27,0:26:69.23:0,69,1082	0/0:30,0:30:78.26:0,78,1225	0/0:21,0:19:36.12:0,36,576	0/0:34,4:36:63.21:0,63,1006	0/0:29,0:27:69.19:0,69,1094	0/1:13,5:12:47.93:150,0,48	0/1:4,4:5:44.23:72,0,44	0/0:18,0:8:21.07:0,21,315	0/0:14,0:11:0.89:0,1,2	./.	0/0:27,0:21:24.08:0,24,384	0/0:15,0:12:24.08:0,24,372	0/0:51,1:44:78.24:0,78,1222	0/0:37,0:36:71.89:0,72,1077	0/0:16,0:11:20.80:0,21,189	0/0:14,0:13:9.03:0,9,119	./.
chr10	102458882	.	C	CAGAG	149.75	PASS	AB=0.905;AC=13;AF=0.260;AN=50;BaseQRankSum=5.698;DP=579;FS=6.700;HRun=0;HaplotypeScore=94.4103;InbreedingCoeff=0.5573;MQ=47.03;MQ0=49;MQRankSum=-5.018;QD=1.37;ReadPosRankSum=-2.254;VQSLOD=0.8756;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:12:2.97:31,3,0	0/0:17,0:15:27.09:0,27,474	0/0:1,0:1:3.01:0,3,52	./.	0/0:34,0:29:51.16:0,51,861	0/0:22,0:21:42.05:0,42,659	0/0:41,0:31:59.22:0,59,974	1/1:17,0:2:2.80:13,3,0	0/0:27,0:26:74.53:0,75,1116	0/0:30,0:26:62.02:0,62,1077	0/0:22,0:18:42.13:0,42,717	0/0:27,0:26:67.44:0,67,1108	0/0:28,0:28:66.10:0,66,1101	0/0:19,0:17:33:0,33,547	0/0:40,0:38:60.19:0,60,1001	0/0:29,0:27:46.10:0,46,1052	0/1:13,2:10:62.83:63,0,152	0/1:8,0:5:7.09:7,0,97	1/1:14,1:6:3.01:78,3,0	0/1:8,2:7:0:0,0,0	./.	0/0:24,0:19:24.07:0,24,402	0/0:20,0:15:27.07:0,27,426	0/0:47,0:41:81.26:0,81,1416	0/0:36,0:34:69.09:0,69,1172	1/1:12,0:9:15.52:89,16,0	1/1:11,1:10:1.25:3,1,0	./.
chr10	102458996	.	GAGAGAC	G	198.92	PASS	AC=4;AF=0.100;AN=40;BaseQRankSum=4.753;DP=526;FS=9.284;HRun=0;HaplotypeScore=103.5088;InbreedingCoeff=0.7598;MQ=45.43;MQ0=36;MQRankSum=-4.398;QD=6.86;ReadPosRankSum=1.703;VQSLOD=1.4700;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:14,0:13:38.87:0,39,1052	./.	./.	0/0:32,0:29:63.20:0,63,1978	0/0:22,0:19:23.71:0,24,601	0/0:31,0:27:65.65:0,66,1855	./.	0/0:20,0:19:39.06:0,39,987	0/0:38,0:33:93.31:0,93,2728	0/0:29,0:29:63.16:0,63,1834	0/0:23,0:22:23.65:0,24,672	0/0:23,0:23:54.07:0,54,1342	0/0:32,0:32:39.03:0,39,1033	0/0:22,0:21:12.04:0,12,363	0/0:38,0:35:54.01:0,54,1682	./.	1/1:4,2:3:3.37:9,3,0	1/1:22,1:8:17.92:286,18,0	./.	./.	0/0:39,0:38:84.29:0,84,2596	0/0:17,0:17:45.07:0,45,1008	0/0:32,0:30:66.23:0,66,2067	0/0:24,0:24:57.02:0,57,1764	0/0:4,0:3:2.96:0,3,19	0/0:2,2:3:0:0,0,0	./.
chr10	102459000	.	GAC	G	63.44	PASS	AB=0.880;AC=3;AF=0.071;AN=42;BaseQRankSum=3.683;DP=531;FS=4.650;HRun=0;HaplotypeScore=78.4449;InbreedingCoeff=0.5046;MQ=45.33;MQ0=33;MQRankSum=-3.157;QD=2.27;ReadPosRankSum=0.309;VQSLOD=1.5446;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:2:0:0,0,0	0/0:14,0:13:38.84:0,39,617	./.	./.	0/0:29,0:27:59.36:0,59,1131	0/0:23,0:20:26.63:0,27,373	0/0:32,0:28:68.96:0,69,1174	./.	0/0:21,0:20:42.03:0,42,668	0/0:41,0:36:99:0,99,1688	0/0:29,0:29:66.18:0,66,1145	0/0:24,0:23:27.53:0,28,440	0/0:23,0:23:57.05:0,57,846	0/0:31,0:31:39.07:0,39,607	0/0:24,0:23:12.04:0,12,220	0/0:36,0:33:54.15:0,54,959	./.	1/1:4,2:3:6.02:66,6,0	0/1:19,3:8:25.37:88,0,25	./.	./.	0/0:38,0:37:84.75:0,85,1575	0/0:17,0:17:45.07:0,45,694	0/0:33,0:31:69.19:0,69,1244	0/0:25,0:25:57.02:0,57,1020	0/0:4,0:3:2.94:0,3,18	0/0:4,0:3:0:0,0,0	./.
chr10	102459028	.	GACAC	G	57.30	PASS	AB=0.954;AC=6;AF=0.125;AN=48;BaseQRankSum=5.844;DP=617;FS=1.341;HRun=0;HaplotypeScore=102.8245;InbreedingCoeff=0.2147;MQ=48.32;MQ0=47;MQRankSum=-2.614;QD=0.52;ReadPosRankSum=-2.292;VQSLOD=1.8104;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:14,0:13:37.93:0,38,893	0/1:24,1:6:20.85:21,0,126	0/1:48,1:9:2.01:2,0,10	0/0:32,0:31:78.05:0,78,1866	0/0:24,0:21:15.05:0,15,420	0/0:30,0:29:71.71:0,72,1692	./.	0/0:29,0:29:54.17:0,54,1422	0/0:47,0:44:92.87:0,93,3155	0/0:19,0:18:54.19:0,54,1408	0/0:26,0:26:46.40:0,46,1073	0/0:31,0:31:75.24:0,75,1955	0/0:31,0:31:33.11:0,33,829	0/0:26,0:25:18.06:0,18,435	0/0:40,0:39:78.09:0,78,1940	./.	0/0:4,1:2:1.25:0,1,20	1/1:14,1:4:7.58:109,8,0	0/0:13,4:16:2.01:0,2,7	./.	0/0:31,0:29:63.20:0,63,1663	0/0:21,0:18:45.15:0,45,1194	0/0:29,0:27:63.19:0,63,1610	0/0:32,0:32:71.60:0,72,1646	0/1:10,0:8:29.50:29,0,72	0/0:4,0:4:2.93:0,3,22	0/1:7,1:6:0.54:1,0,79
chr10	102459030	.	CACAG	C	100.25	PASS	AB=0.939;AC=7;AF=0.146;AN=48;BaseQRankSum=6.122;DP=626;FS=4.396;HRun=0;HaplotypeScore=106.5829;InbreedingCoeff=0.3053;MQ=48.39;MQ0=47;MQRankSum=-3.117;QD=1.62;ReadPosRankSum=-1.578;VQSLOD=1.3625;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:14,0:14:39.12:0,39,928	0/1:26,0:6:27.22:27,0,137	0/0:52,0:9:1.36:0,1,30	0/0:29,1:29:80.99:0,81,1797	0/0:24,0:22:21.07:0,21,512	0/0:30,0:29:68.79:0,69,1608	./.	0/0:30,0:30:57.20:0,57,1481	0/0:47,1:45:60.39:0,60,2947	0/0:20,0:19:54.16:0,54,1328	0/0:27,0:26:45.49:0,45,1085	0/0:33,0:33:75.26:0,75,2029	0/0:33,0:33:36.76:0,37,831	0/0:27,0:27:18.03:0,18,385	0/0:41,0:40:75.10:0,75,1880	./.	1/1:4,0:2:2.99:23,3,0	1/1:15,0:4:5.74:92,6,0	0/0:13,2:14:2.10:0,2,7	./.	0/0:29,2:29:68.76:0,69,1754	0/0:23,0:20:50.38:0,50,1242	0/0:30,0:28:60.19:0,60,1512	0/0:34,0:34:69.17:0,69,1565	0/1:7,2:7:47.04:68,0,47	0/0:1,2:3:2.86:0,3,17	0/1:8,0:6:5.56:6,0,78
chr10	102459052	.	GAC	G	78.89	PASS	AB=0.863;AC=4;AF=0.087;AN=46;BaseQRankSum=4.316;DP=689;FS=7.496;HRun=0;HaplotypeScore=104.5634;InbreedingCoeff=0.2503;MQ=47.57;MQ0=50;MQRankSum=-3.384;QD=2.39;ReadPosRankSum=-1.066;VQSLOD=1.5054;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:13,0:12:33.10:0,33,577	0/0:37,0:7:15.20:0,15,208	0/0:69,0:10:11.46:0,11,94	0/0:30,0:26:74.63:0,75,1182	0/0:31,0:27:25.60:0,26,572	0/0:23,0:22:55.43:0,55,1017	./.	0/0:31,1:32:57.19:0,57,1067	0/0:44,0:40:79.55:0,80,1646	0/0:21,0:20:53.98:0,54,946	0/0:33,1:32:68.99:0,69,1139	0/0:40,0:39:87.28:0,87,1590	0/0:30,0:30:29.74:0,30,560	0/0:33,1:34:30.01:0,30,501	0/0:44,0:42:75.22:0,75,1334	./.	./.	0/0:6,0:1:2.98:0,3,21	0/0:15,9:21:2.39:0,2,9	./.	0/0:37,0:34:84.19:0,84,1390	0/0:29,0:26:57.01:0,57,991	0/0:26,0:25:48.08:0,48,765	0/0:32,0:30:51.14:0,51,884	0/1:15,4:16:99:100,0,207	1/1:3,2:5:3.01:34,3,0	0/1:8,1:5:43.87:44,0,48
chr10	102459058	.	GAC	G	43.12	PASS	AB=0.857;AC=6;AF=0.136;AN=44;BaseQRankSum=6.377;DP=682;FS=0.000;HRun=0;HaplotypeScore=107.6149;InbreedingCoeff=0.3291;MQ=46.81;MQ0=48;MQRankSum=-3.692;QD=0.70;ReadPosRankSum=-0.890;VQSLOD=1.1425;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:11,0:10:27.09:0,27,477	0/0:35,0:7:13.55:0,14,166	0/0:63,0:8:1.54:0,2,29	0/0:33,2:31:66.13:0,66,1093	0/0:31,1:28:25.61:0,26,546	0/0:22,0:21:51.16:0,51,851	./.	0/0:32,0:33:41.22:0,41,955	0/0:40,1:40:54.47:0,54,1542	0/0:18,1:19:51.14:0,51,829	0/0:35,0:33:75.14:0,75,1221	0/0:40,0:41:84.27:0,84,1412	0/0:30,0:29:29.98:0,30,411	0/0:32,0:32:30.03:0,30,496	0/0:44,0:42:83.07:0,83,1262	./.	./.	./.	1/1:15,8:22:0.89:3,1,0	./.	0/0:33,5:34:72.18:0,72,1145	0/0:28,4:29:60.19:0,60,1022	0/0:22,0:21:36.01:0,36,514	0/0:22,6:27:42.12:0,42,666	0/1:17,3:16:91.02:91,0,158	1/1:5,0:6:3:28,3,0	0/1:8,1:5:21.46:21,0,35
chr10	102459108	.	C	CAG	90.54	PASS	AB=0.914;AC=5;AF=0.114;AN=44;BaseQRankSum=6.145;DP=571;FS=10.156;HRun=0;HaplotypeScore=105.3826;InbreedingCoeff=0.3745;MQ=35.89;MQ0=35;MQRankSum=-5.323;QD=0.95;ReadPosRankSum=-1.464;VQSLOD=0.7208;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:10:0:0,0,0	0/0:6,5:8:12.01:0,12,127	./.	./.	0/0:28,0:22:24.08:0,24,311	0/0:35,0:29:9.49:0,9,225	0/0:15,1:14:2.81:0,3,38	./.	0/0:25,1:25:18.07:0,18,311	0/0:39,0:27:8.18:0,8,713	0/0:14,0:12:12.03:0,12,142	0/0:39,0:36:19.52:0,20,577	0/0:27,0:24:32.83:0,33,424	0/0:28,0:25:8.04:0,8,116	0/0:32,3:36:20.41:0,20,272	0/0:48,0:44:34.44:0,34,456	./.	1/1:2,0:2:5.93:40,6,0	./.	0/1:35,8:42:0:0,0,0	./.	0/0:22,2:19:17.44:0,17,233	0/0:24,0:19:18.06:0,18,234	0/0:11,0:8:9.03:0,9,117	0/0:14,2:12:12.03:0,12,142	0/1:27,3:27:99:141,0,134	0/0:7,2:8:8.55:0,9,68	0/0:14,0:11:3.17:0,3,51
chr10	102459118	.	C	CAG	134.48	PASS	AB=0.954;AC=10;AF=0.217;AN=46;BaseQRankSum=6.392;DP=512;FS=22.350;HRun=0;HaplotypeScore=88.7998;InbreedingCoeff=0.4058;MQ=34.21;MQ0=34;MQRankSum=-5.547;QD=1.00;ReadPosRankSum=0.845;VQSLOD=0.1281;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,2:9:0:0,0,0	0/0:10,0:7:3.01:0,3,37	./.	./.	0/0:25,0:18:15.03:0,15,179	0/0:30,0:25:12.35:0,12,221	0/0:14,0:12:2.77:0,3,19	./.	0/0:19,1:19:17.92:0,18,188	0/1:34,1:24:13.21:13,0,560	0/0:13,1:12:9.03:0,9,117	0/0:28,9:34:38.97:0,39,475	0/0:21,0:19:26.77:0,27,333	0/0:27,0:24:8.01:0,8,115	0/0:33,0:33:17.40:0,17,227	0/0:40,3:39:2.30:0,2,301	1/1:4,0:3:5.75:49,6,0	1/1:5,0:4:8.76:82,9,0	./.	0/1:31,1:39:0:0,0,0	./.	0/0:21,1:17:11.40:0,11,140	0/0:20,1:16:18.06:0,18,233	0/0:9,0:7:9.03:0,9,117	0/0:14,0:10:6.02:0,6,78	0/1:22,0:19:44.25:44,0,73	0/0:8,0:8:5.61:0,6,67	1/1:11,0:10:7.42:70,7,0
chr10	102459120	.	G	GAGACAC	79.42	PASS	AB=1.000;AC=7;AF=0.152;AN=46;BaseQRankSum=5.855;DP=504;FS=17.131;HRun=0;HaplotypeScore=103.8639;InbreedingCoeff=0.2794;MQ=33.92;MQ0=32;MQRankSum=-5.481;QD=1.35;ReadPosRankSum=-2.183;VQSLOD=0.6239;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:9:0.47:1,0,0	0/0:10,0:7:6.01:0,6,92	./.	./.	0/0:25,0:18:24.04:0,24,425	0/0:29,1:25:6.57:0,7,422	0/0:14,0:12:2.21:0,2,65	./.	0/0:20,0:19:0.57:0,1,299	0/0:35,0:24:44.96:0,45,1094	0/0:13,0:11:9.03:0,9,213	0/0:36,0:33:48.36:0,48,967	0/0:21,0:19:34.62:0,35,725	0/0:26,1:24:10.19:0,10,223	0/0:32,1:33:19.99:0,20,467	0/0:40,0:36:30.44:0,30,648	0/1:4,0:3:1.77:45,0,2	1/1:5,0:4:10.27:112,10,0	./.	0/0:41,0:39:1.83:0,2,5	./.	0/0:21,0:16:14.07:0,14,303	0/0:21,0:16:18.06:0,18,422	0/0:9,1:7:9.03:0,9,213	0/0:13,0:9:6.02:0,6,142	0/1:24,0:19:20.84:21,0,285	0/0:9,0:8:8.23:0,8,129	0/1:13,0:10:8.51:9,0,118
chr10	102459122	.	G	GAC	43.99	PASS	AB=0.765;AC=5;AF=0.104;AN=48;BaseQRankSum=4.708;DP=491;FS=14.744;HRun=0;HaplotypeScore=82.3184;InbreedingCoeff=0.5187;MQ=33.88;MQ0=30;MQRankSum=-4.366;QD=2.00;ReadPosRankSum=-0.403;VQSLOD=-0.0899;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,3:9:0:0,0,0	0/0:9,0:6:6.01:0,6,71	./.	./.	0/0:23,0:18:24.04:0,24,302	0/0:30,0:25:12.46:0,12,282	0/0:14,0:12:2.81:0,3,41	./.	0/0:18,0:18:20.19:0,20,272	0/0:34,0:23:37.07:0,37,797	0/0:12,0:10:9.03:0,9,138	0/0:34,0:32:46.48:0,46,630	0/0:21,0:19:33.70:0,34,459	0/0:26,0:23:10.51:0,11,153	0/0:31,0:32:20.40:0,20,299	0/0:33,1:36:24.28:0,24,406	1/1:2,2:3:6.67:25,7,0	1/1:2,3:4:8.77:117,9,0	0/0:6,0:2:2.97:0,3,20	0/0:38,3:39:2.24:0,2,5	./.	0/0:20,0:15:14.42:0,14,206	0/0:20,0:15:18.06:0,18,275	0/0:10,0:7:9.03:0,9,138	0/0:13,0:9:6.02:0,6,92	0/0:22,0:18:14.93:0,15,324	0/0:9,0:8:8.57:0,9,104	0/0:13,0:10:1.02:0,1,66
chr10	102459132	.	G	GACAC	77.77	PASS	AB=0.947;AC=7;AF=0.152;AN=46;BaseQRankSum=3.313;DP=416;FS=1.283;HRun=0;HaplotypeScore=76.6379;InbreedingCoeff=0.1383;MQ=31.90;MQ0=27;MQRankSum=-4.515;QD=1.10;ReadPosRankSum=-1.485;VQSLOD=1.3495;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:9:0.47:1,0,0	./.	./.	./.	0/0:19,0:14:12.04:0,12,240	0/0:25,1:22:9.96:0,10,143	1/1:12,1:11:0.27:1,0,0	./.	0/1:12,1:13:49.77:59,0,50	0/1:27,0:19:99:102,0,657	0/0:11,0:9:9.03:0,9,179	0/0:28,0:26:30.48:0,30,488	0/0:14,0:14:6.91:0,7,337	0/0:20,1:18:4.36:0,4,107	0/0:23,2:25:14.68:0,15,236	0/0:31,0:31:23.63:0,24,412	0/1:4,0:3:0.59:1,0,36	0/0:6,0:5:5.43:0,5,63	0/0:10,0:3:9.03:0,9,172	0/0:34,0:34:0.26:0,0,0	./.	0/0:17,0:12:8.29:0,8,133	0/0:17,1:13:15.05:0,15,299	0/0:10,0:7:9.03:0,9,168	0/0:13,0:9:6.02:0,6,110	0/0:15,0:13:10.63:0,11,454	0/0:7,0:6:5.19:0,5,117	0/0:12,0:9:15.73:0,16,142
chr10	102459355	.	C	CAG	311.59	PASS	AB=0.814;AC=14;AF=0.304;AN=46;BaseQRankSum=0.527;DP=293;FS=3.586;HRun=0;HaplotypeScore=93.3089;InbreedingCoeff=0.1511;MQ=35.74;MQ0=4;MQRankSum=0.764;QD=2.49;ReadPosRankSum=-1.173;VQSLOD=1.7006;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:6:2.82:0,3,14	0/0:8,0:7:11.96:0,12,101	./.	./.	0/0:17,0:15:8.93:0,9,69	0/1:6,9:14:10.82:61,0,11	./.	0/1:31,0:20:99:105,0,205	1/1:1,10:11:2.68:11,3,0	0/0:18,0:17:44.37:0,44,461	0/0:8,0:8:2.92:0,3,24	0/0:16,0:16:17.31:0,17,138	0/0:15,0:15:11.85:0,12,102	1/1:5,10:14:3.01:48,3,0	1/1:3,6:9:3.01:49,3,0	0/0:12,0:12:2.60:0,3,10	0/0:3,0:3:2.78:0,3,14	0/0:3,0:3:3.01:0,3,33	0/0:10,0:9:20.60:0,21,170	0/0:13,0:12:14.77:0,15,154	./.	0/1:7,5:12:24.18:84,0,24	0/1:2,8:9:0:0,0,0	./.	1/1:3,3:6:2.98:48,3,0	0/1:5,0:5:14.66:15,0,71	0/1:11,0:10:22:22,0,51	0/0:13,0:13:23.85:0,24,218
chr10	102461353	.	AACAC	A	614.34	PASS	AB=0.909;AC=20;AF=0.435;AN=46;BaseQRankSum=2.351;DP=566;FS=3.206;HRun=0;HaplotypeScore=95.1268;InbreedingCoeff=0.5122;MQ=70.24;MQ0=9;MQRankSum=0.328;QD=2.65;ReadPosRankSum=-0.300;VQSLOD=1.6931;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:12.04:0,12,257	0/0:7,0:7:3.01:0,3,70	./.	./.	0/0:18,0:18:20.84:0,21,358	0/0:16,0:16:0:0,0,0	1/1:14,1:15:3.01:46,3,0	0/0:19,0:19:3.17:0,3,8	1/1:22,5:27:9.03:138,9,0	0/1:25,0:25:22.62:23,0,64	./.	1/1:19,2:21:3.48:47,3,0	0/0:26,0:25:22.32:0,22,434	1/1:17,1:18:3:46,3,0	1/1:14,5:19:12.04:184,12,0	0/0:15,0:15:8.70:0,9,120	1/1:16,1:17:6.01:74,6,0	1/1:18,0:20:4.54:33,5,0	0/0:13,0:13:6.02:0,6,112	0/0:21,0:21:12.02:0,12,202	0/0:33,0:35:17.78:0,18,237	./.	1/1:20,0:19:3.47:27,3,0	0/1:21,5:27:0.39:126,0,0	1/1:21,0:21:2.97:23,3,0	0/0:21,0:21:15.03:0,15,177	./.	0/0:3,0:3:3.01:0,3,41
chr10	102461513	.	G	GAGAC	19608.98	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-6.116;DP=702;FS=15.568;HRun=0;HaplotypeScore=118.0861;InbreedingCoeff=0.9996;MQ=73.39;MQ0=0;MQRankSum=-7.384;QD=65.58;ReadPosRankSum=-0.210;VQSLOD=5.9555;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,42:50:99:3273,120,0	0/0:13,0:13:39.11:0,39,720	0/0:18,0:19:45.08:0,45,709	0/0:17,0:17:43.68:0,44,752	0/0:13,0:13:36.12:0,36,682	0/0:26,0:26:75.24:0,75,1420	0/0:32,0:32:93.30:0,93,1751	1/1:5,20:29:78.71:1922,79,0	0/0:23,0:23:69.24:0,69,1315	0/0:21,0:21:63.22:0,63,1209	0/0:12,0:12:36.12:0,36,697	0/0:25,0:25:75.24:0,75,1397	0/0:30,0:30:84.25:0,84,1550	0/0:28,0:28:81.28:0,81,1558	0/0:21,0:21:63.22:0,63,1178	0/0:21,0:21:57.20:0,57,1080	1/1:2,32:35:93.32:2514,93,0	1/1:6,20:25:57.20:1539,57,0	1/1:7,17:25:75.24:1911,75,0	1/1:3,11:14:24.08:653,24,0	1/1:4,35:42:87.77:2366,88,0	0/0:24,0:24:69.23:0,69,1305	0/0:25,0:25:60.19:0,60,1109	0/0:31,0:31:93.28:0,93,1746	0/0:22,0:22:66.23:0,66,1272	1/1:7,29:36:99:2533,102,0	1/1:1,27:29:78.27:2077,78,0	1/1:3,9:13:30.10:820,30,0
chr10	102461648	.	T	TCA	26988.80	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-7.907;DP=732;FS=5.315;HRun=0;HaplotypeScore=87.2250;InbreedingCoeff=0.9958;MQ=84.73;MQ0=0;MQRankSum=-6.589;QD=50.26;ReadPosRankSum=3.976;VQSLOD=5.9446;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,40:43:99:1907,99,0	0/0:9,0:9:21.07:0,21,321	0/0:23,0:23:54.65:0,55,935	0/0:30,0:30:90.23:0,90,1281	0/0:24,0:24:72.23:0,72,1079	1/1:0,20:20:57.20:1099,57,0	1/1:0,25:26:72.25:1390,72,0	1/1:1,33:35:99:1896,105,0	1/1:1,27:28:78.27:1486,78,0	0/0:22,0:21:57.06:0,57,834	0/0:12,0:12:33.10:0,33,485	0/0:31,0:31:87.30:0,87,1329	0/0:18,0:18:48.16:0,48,734	1/1:2,29:32:75.26:1422,75,0	1/1:0,27:28:81.28:1556,81,0	0/0:25,1:26:14.30:0,14,995	1/1:0,30:31:81.28:1551,81,0	1/1:3,25:29:66.23:1253,66,0	1/1:1,30:31:90.29:1674,90,0	1/1:0,15:18:54.19:1026,54,0	1/1:2,40:44:99:1893,99,0	1/1:0,18:19:48.16:926,48,0	1/1:3,19:24:63.08:1195,63,0	1/1:0,32:32:84.29:1621,84,0	1/1:2,19:24:66.23:1247,66,0	1/1:4,32:36:99:2010,105,0	1/1:1,27:29:74.97:1437,75,0	1/1:0,6:7:21.07:399,21,0
chr10	102463118	.	TGTGTGTGTA	T	6968.68	PASS	AB=1.000;AC=35;AF=0.648;AN=54;BaseQRankSum=-10.023;DP=656;FS=37.054;HRun=0;HaplotypeScore=185.1438;InbreedingCoeff=0.1721;MQ=47.19;MQ0=32;MQRankSum=2.413;QD=13.00;ReadPosRankSum=-7.160;VQSLOD=-0.5409;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,3:37:70.06:1244,70,0	0/0:2,0:2:3.01:0,3,32	0/0:27,0:1:3.01:0,3,41	0/0:26,0:3:6.02:0,6,74	0/1:26,0:24:99:202,0,379	1/1:24,0:24:21.15:215,21,0	1/1:31,1:31:26.95:320,27,0	1/1:34,0:30:46.21:676,46,0	1/1:21,1:22:4.25:276,4,0	0/1:30,0:28:99:276,0,485	0/1:12,0:9:32.98:104,0,33	0/1:23,0:22:41.93:42,0,494	0/1:22,0:21:99:110,0,589	0/0:28,0:28:8.79:0,9,30	0/0:13,0:13:9.33:0,9,31	0/1:21,0:21:99:127,0,461	1/1:33,3:29:42.09:759,42,0	1/1:18,2:16:25.50:484,25,0	1/1:11,11:20:10.94:679,11,0	1/1:14,3:14:6.49:137,6,0	1/1:31,1:26:27.09:476,27,0	0/1:23,0:22:2.86:13,0,3	0/1:12,0:12:0.66:1,0,4	0/1:45,0:44:34.86:35,0,36	./.	1/1:2,18:19:35.76:579,36,0	1/1:2,12:13:2.96:89,3,0	1/1:11,0:11:9.50:125,10,0
chr10	102463120	.	TGTGTGTA	T	7246.83	PASS	AB=1.000;AC=43;AF=0.796;AN=54;BaseQRankSum=-6.326;DP=647;FS=33.322;HRun=0;HaplotypeScore=170.0419;InbreedingCoeff=0.1832;MQ=48.21;MQ0=32;MQRankSum=0.280;QD=12.74;ReadPosRankSum=-3.439;VQSLOD=2.1907;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:35:70.06:940,70,0	0/0:2,0:2:2.80:0,3,13	0/0:27,0:1:3.01:0,3,41	0/0:25,0:3:9.02:0,9,103	0/1:26,0:24:99:226,0,205	1/1:22,2:24:30:445,30,0	1/1:29,2:30:35.82:550,36,0	1/1:34,0:30:47.55:640,48,0	1/1:22,0:22:50.74:593,51,0	0/1:30,0:28:99:281,0,267	1/1:12,0:9:1.50:121,1,0	0/1:23,0:22:47.51:48,0,251	0/1:24,0:23:99:237,0,303	1/1:28,0:28:11.65:73,12,0	1/1:12,0:12:11.78:74,12,0	0/1:22,0:22:99:187,0,219	1/1:35,0:27:42.08:598,42,0	1/1:19,0:15:25.88:382,26,0	1/1:21,0:19:30.08:520,30,0	1/1:16,0:13:6.48:75,6,0	1/1:32,0:26:27.54:373,28,0	1/1:22,2:23:5.65:38,6,0	1/1:10,1:11:4.73:23,5,0	1/1:45,0:44:5.41:139,5,0	./.	1/1:19,0:18:36.08:503,36,0	1/1:14,0:13:3.01:56,3,0	1/1:8,1:9:9.50:126,10,0
chr10	102463122	.	TGTGTA	T	8619.20	PASS	AB=0.992;AC=45;AF=0.833;AN=54;BaseQRankSum=-5.556;DP=636;FS=20.904;HRun=0;HaplotypeScore=154.2583;InbreedingCoeff=0.1676;MQ=48.59;MQ0=32;MQRankSum=0.189;QD=15.23;ReadPosRankSum=-2.140;VQSLOD=2.4192;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:37:79.01:993,79,0	1/1:2,0:2:1.82:5,2,0	0/0:26,0:1:3.01:0,3,41	0/0:23,0:3:9.02:0,9,103	0/1:27,0:25:49.69:294,0,50	1/1:19,4:23:30.10:469,30,0	1/1:25,5:29:35.93:587,36,0	1/1:29,0:25:47.94:646,48,0	1/1:20,3:23:51.07:825,51,0	0/1:28,0:26:53.86:355,0,54	1/1:12,0:9:20.20:239,20,0	0/1:25,0:24:64.99:156,0,65	0/1:25,0:24:71.49:330,0,71	1/1:2,25:27:11.62:251,12,0	1/1:2,10:12:12.04:251,12,0	0/1:22,1:23:36.49:310,0,36	1/1:35,0:27:45.08:590,45,0	1/1:20,0:16:30.86:378,31,0	1/1:18,0:16:30.06:436,30,0	1/1:16,0:13:6.45:63,6,0	1/1:32,0:26:27.93:374,28,0	1/1:6,18:23:5.85:99,6,0	1/1:2,9:11:4.83:68,5,0	1/1:5,39:43:14.64:255,15,0	./.	1/1:19,0:18:36.08:478,36,0	1/1:14,0:13:3.01:42,3,0	1/1:9,0:9:9.92:126,10,0
chr10	102463124	.	TGTA	T	8843.76	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=-4.234;DP=623;FS=7.861;HRun=0;HaplotypeScore=139.0945;InbreedingCoeff=0.6002;MQ=49.86;MQ0=31;MQRankSum=0.587;QD=16.02;ReadPosRankSum=-1.558;VQSLOD=3.5867;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:37:79.08:1015,79,0	1/1:2,0:2:2.99:23,3,0	0/0:27,0:2:6.02:0,6,83	0/0:23,0:3:9.02:0,9,102	1/1:26,1:25:34.78:463,35,0	1/1:24,0:24:30.08:375,30,0	1/1:28,0:27:39.01:482,39,0	1/1:28,0:24:48.14:641,48,0	1/1:25,0:25:51.11:637,51,0	1/1:23,2:23:50.91:594,51,0	1/1:11,0:8:21.03:254,21,0	1/1:24,1:24:29.74:375,30,0	1/1:24,1:24:45.63:612,46,0	1/1:25,0:25:12.02:122,12,0	1/1:10,1:11:12.03:127,12,0	1/1:22,2:24:36.12:482,36,0	1/1:35,0:27:45.04:550,45,0	1/1:19,0:15:32.49:353,32,0	1/1:17,0:15:30.41:385,30,0	1/1:15,0:12:5.97:61,6,0	1/1:32,0:27:31.87:414,32,0	1/1:23,0:22:5.84:50,6,0	1/1:11,0:11:4.82:36,5,0	1/1:43,0:42:14.68:194,15,0	./.	1/1:19,0:18:36.07:449,36,0	1/1:14,0:13:3:28,3,0	1/1:6,0:6:9.03:124,9,0
chr10	102463126	.	TA	T	9182.56	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=-2.647;DP=590;FS=7.797;HRun=1;HaplotypeScore=118.8400;InbreedingCoeff=0.6019;MQ=51.49;MQ0=31;MQRankSum=1.079;QD=17.66;ReadPosRankSum=2.831;VQSLOD=4.8836;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:34:78.05:1010,78,0	1/1:0,2:2:3.01:42,3,0	0/0:27,1:3:6:0,6,83	0/0:23,0:3:9.02:0,9,102	1/1:1,25:24:45.15:622,45,0	1/1:6,17:23:29.91:348,30,0	1/1:9,18:26:36.47:413,36,0	1/1:3,18:19:50.74:687,51,0	1/1:5,20:25:50.80:527,51,0	1/1:2,21:21:60.18:808,60,0	1/1:1,10:8:20.97:239,21,0	1/1:1,23:23:39.54:500,40,0	1/1:1,23:23:60.14:793,60,0	1/1:25,0:25:11.65:66,12,0	1/1:11,0:11:11.74:72,12,0	1/1:3,20:23:44.95:539,45,0	1/1:4,26:22:44.79:547,45,0	1/1:5,11:13:32.40:368,32,0	1/1:15,0:13:30.03:327,30,0	1/1:3,12:12:6.02:83,6,0	1/1:6,22:24:32.14:416,32,0	1/1:21,1:21:5.81:58,6,0	1/1:11,0:11:4.63:21,5,0	1/1:39,3:41:14.83:132,15,0	./.	1/1:19,0:18:35.90:424,36,0	1/1:12,1:12:2.84:14,3,0	1/1:1,5:6:9.03:124,9,0
chr10	102463500	.	CTG	C	152.13	PASS	AB=0.920;AC=9;AF=0.161;AN=56;BaseQRankSum=6.475;DP=599;FS=17.602;HRun=0;HaplotypeScore=139.5542;InbreedingCoeff=-0.2168;MQ=47.05;MQ0=32;MQRankSum=-3.406;QD=0.87;ReadPosRankSum=-4.756;VQSLOD=-0.3407;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:5.89:0,6,40	0/0:12,0:12:17.12:0,17,545	0/0:29,0:5:7.80:0,8,121	0/0:48,1:7:13.18:0,13,187	0/0:28,0:26:66.17:0,66,1137	0/1:29,0:25:84.51:85,0,362	0/0:19,2:19:12.53:0,13,547	0/0:18,0:15:41.85:0,42,364	0/1:9,9:18:14.12:14,0,281	0/0:37,0:35:82.47:0,82,1620	0/0:27,0:24:46.95:0,47,806	0/0:19,0:19:47.75:0,48,817	0/0:25,0:25:58.06:0,58,1022	0/0:15,6:20:0.96:0,1,287	0/0:17,6:23:20.95:0,21,380	0/0:23,0:23:56.78:0,57,1025	0/1:9,1:10:7.34:7,0,99	0/1:12,2:14:70.18:70,0,127	0/1:7,0:6:16.35:16,0,36	0/0:19,0:18:11.81:0,12,102	0/0:10,1:10:14.94:0,15,145	0/1:36,3:34:41.65:42,0,778	0/1:15,1:15:24.45:24,0,237	0/0:11,3:14:8.94:0,9,350	0/1:25,1:25:6.82:7,0,606	0/0:13,0:12:4.66:0,5,189	0/1:16,0:16:20:20,0,50	0/0:17,0:17:26.87:0,27,272
chr10	102463506	.	CTG	C	1442.68	PASS	AB=0.990;AC=25;AF=0.446;AN=56;BaseQRankSum=8.955;DP=595;FS=37.183;HRun=0;HaplotypeScore=133.9791;InbreedingCoeff=0.2186;MQ=47.11;MQ0=30;MQRankSum=-2.666;QD=4.35;ReadPosRankSum=-5.191;VQSLOD=-0.4605;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:12,4:15:5.85:43,6,0	0/0:12,0:12:32.74:0,33,451	0/0:24,0:3:8.88:0,9,73	0/0:49,0:6:10.74:0,11,83	0/0:27,0:25:63.06:0,63,907	0/1:30,0:26:99:155,0,133	0/1:22,0:20:11.34:11,0,198	0/1:20,0:17:0.20:186,0,0	0/1:19,0:19:16.78:17,0,113	0/0:38,0:36:58.56:0,59,1351	0/0:26,0:23:32.13:0,32,736	0/0:20,0:20:42.11:0,42,759	0/0:24,0:24:50.60:0,51,756	0/1:21,2:22:41.19:41,0,143	0/1:24,0:24:28.09:28,0,116	0/0:25,0:25:69.10:0,69,1045	0/1:11,0:11:1.59:41,0,2	1/1:10,0:10:23.61:160,24,0	1/1:7,0:6:15.41:123,15,0	1/1:0,18:17:5.81:34,6,0	0/1:12,0:11:11.32:85,0,11	0/1:41,0:36:64.71:65,0,435	0/1:14,0:13:27.51:28,0,83	0/0:15,0:15:5.39:0,5,138	0/1:27,1:27:31.94:32,0,329	1/1:9,1:9:23:214,23,0	1/1:10,4:14:11.95:114,12,0	1/1:13,0:13:32.53:253,33,0
chr10	102463525	.	TCTCTCTCC	T	476.84	PASS	AB=0.972;AC=16;AF=0.286;AN=56;BaseQRankSum=3.099;DP=566;FS=15.608;HRun=0;HaplotypeScore=169.7062;InbreedingCoeff=0.1334;MQ=47.39;MQ0=32;MQRankSum=-3.997;QD=2.41;ReadPosRankSum=-2.037;VQSLOD=1.3439;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,3:13:0.03:0,0,1	0/0:10,0:10:30.03:0,30,840	0/0:19,0:1:1.82:0,2,5	0/1:46,0:3:23.85:27,0,24	0/0:27,0:25:51.04:0,51,1544	0/0:25,0:22:47.14:0,47,538	0/0:25,0:23:20.69:0,21,554	1/1:18,0:16:23.57:151,24,0	0/0:18,0:18:16.44:0,16,295	0/0:41,0:39:95.66:0,96,2643	0/0:27,0:25:52.97:0,53,1502	0/0:25,0:25:64.99:0,65,1646	0/0:25,0:25:60.99:0,61,1356	0/0:23,0:22:20.08:0,20,509	0/1:22,0:22:20.77:21,0,295	0/0:27,0:27:71.94:0,72,1752	0/1:9,0:9:3.83:32,0,4	0/1:7,0:7:52.43:79,0,52	0/1:5,0:3:45.76:66,0,46	1/1:15,0:13:2.80:18,3,0	0/0:8,0:7:2.63:0,3,19	0/0:41,0:37:35.04:0,35,882	0/1:17,0:16:6.97:7,0,144	0/1:15,0:15:30.07:30,0,295	0/0:27,0:26:43.05:0,43,744	0/1:7,1:8:76.23:89,0,76	0/1:14,0:14:20.82:75,0,21	1/1:7,0:7:6.83:43,7,0
chr10	102463527	.	TCTCTCC	T	440.29	PASS	AB=0.987;AC=18;AF=0.321;AN=56;BaseQRankSum=3.149;DP=574;FS=15.539;HRun=0;HaplotypeScore=157.6086;InbreedingCoeff=0.1333;MQ=47.29;MQ0=33;MQRankSum=-3.114;QD=1.94;ReadPosRankSum=-3.064;VQSLOD=1.1753;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,1:13:0.03:0,0,0	0/0:10,0:10:30.02:0,30,663	0/0:21,0:1:1.82:0,2,5	0/1:46,0:3:23.84:27,0,24	0/0:28,0:26:53.83:0,54,1214	0/0:25,0:22:46.52:0,47,458	0/1:24,0:22:2.56:3,0,427	1/1:19,0:17:19.43:118,19,0	0/0:18,0:18:18.92:0,19,245	0/0:40,0:38:94.80:0,95,2040	0/0:27,0:25:52.69:0,53,1164	0/0:25,0:25:64.99:0,65,1280	0/0:25,0:25:60.04:0,60,1088	0/0:23,0:22:4.47:0,4,386	0/1:23,0:23:17.77:18,0,291	0/0:29,0:29:76.21:0,76,1379	1/1:9,0:9:4.58:65,5,0	0/1:7,0:7:42.05:48,0,42	0/1:6,0:4:28.49:66,0,28	1/1:11,3:12:2.89:18,3,0	0/0:8,0:7:1.97:0,2,18	0/0:41,0:37:38.02:0,38,744	0/1:19,0:18:11.26:11,0,99	0/1:16,0:16:28.97:29,0,206	0/0:26,0:25:43.39:0,43,555	0/1:8,0:8:46.96:76,0,47	0/1:13,1:14:12.31:80,0,12	1/1:7,0:7:6.83:43,7,0
chr10	102464165	.	TTTTGTTTG	T	7658.68	PASS	AB=0.636;AC=21;AF=0.375;AN=56;BaseQRankSum=0.311;DP=676;FS=5.468;HRun=0;HaplotypeScore=195.4791;InbreedingCoeff=0.8923;MQ=62.99;MQ0=6;MQRankSum=-12.414;QD=32.18;ReadPosRankSum=0.113;VQSLOD=4.0902;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,1:42:7.17:0,7,594	0/0:8,0:8:24.08:0,24,998	0/0:37,0:23:10.20:0,10,848	0/0:37,0:27:33.99:0,34,1121	0/0:26,0:26:48.16:0,48,1879	1/1:2,16:18:45.15:1151,45,0	1/1:7,15:23:36.08:820,36,0	0/0:26,0:35:44.93:0,45,369	1/1:8,17:25:39.13:989,39,0	0/0:27,0:27:60.17:0,60,1822	0/0:13,0:14:30.09:0,30,1087	0/0:27,0:27:48.16:0,48,1922	0/0:22,0:22:48.16:0,48,1929	1/1:5,15:20:33.11:839,33,0	1/1:12,19:31:45.02:1143,45,0	0/0:24,0:24:66.23:0,66,2686	1/1:9,8:17:9.03:230,9,0	0/1:9,12:21:27.85:215,0,28	0/0:10,0:20:29.98:0,30,290	0/0:4,0:25:65.92:0,66,565	0/0:10,0:32:50.98:0,51,523	1/1:9,16:25:38.95:756,39,0	1/1:6,14:20:29.81:695,30,0	1/1:10,14:24:14.65:377,15,0	1/1:6,8:14:18.06:443,18,0	0/0:9,0:22:38.94:0,39,324	0/0:5,0:21:38.95:0,39,350	0/0:7,0:18:32.96:0,33,271
chr10	102465258	.	CA	C	3046.13	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-5.492;DP=575;FS=0.367;HRun=11;HaplotypeScore=123.3849;InbreedingCoeff=0.9413;MQ=65.63;MQ0=1;MQRankSum=5.160;QD=16.29;ReadPosRankSum=2.555;VQSLOD=3.1619;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,31:40:65.09:719,65,0	0/0:5,0:5:9.02:0,9,96	0/0:24,0:17:33.78:0,34,299	0/0:27,0:21:21.84:0,22,213	0/0:30,0:30:75.01:0,75,773	0/0:21,0:21:49.22:0,49,239	0/0:15,0:15:31.47:0,31,172	1/1:4,25:30:78.50:625,79,0	0/0:13,0:13:22.60:0,23,119	0/0:25,1:26:38.53:0,39,610	0/0:13,0:14:35.92:0,36,365	0/0:21,2:23:32.53:0,33,549	0/0:13,1:14:14.46:0,14,359	0/0:18,0:18:37.61:0,38,209	0/0:15,0:16:24.64:0,25,141	0/0:15,1:16:14.46:0,14,353	0/0:27,0:27:32.77:0,33,187	0/0:24,0:24:39.57:0,40,202	1/1:7,17:24:24.61:397,25,0	1/1:4,7:12:23:178,23,0	1/1:5,17:22:39.11:365,39,0	0/0:15,0:15:22.81:0,23,97	0/0:19,0:19:27.35:0,27,126	0/0:24,0:24:38.64:0,39,176	0/0:14,0:14:25.65:0,26,134	1/1:8,19:28:0.99:410,1,0	1/1:2,20:23:33.54:355,34,0	1/1:0,8:8:23.97:197,24,0
chr10	102465269	.	A	AAAAAC	10063.34	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-0.696;DP=563;FS=1.105;HRun=0;HaplotypeScore=136.3750;InbreedingCoeff=0.9965;MQ=71.11;MQ0=1;MQRankSum=-8.264;QD=52.14;ReadPosRankSum=-1.169;VQSLOD=4.8735;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:40:99:0,114,1412	0/0:5,0:5:15:0,15,218	0/0:23,0:16:29.11:0,29,455	0/0:29,0:22:25.47:0,25,520	0/0:27,0:27:78.19:0,78,1388	1/1:8,8:21:60.03:1348,60,0	1/1:1,13:16:24.08:685,24,0	0/0:41,0:41:99:0,117,1347	1/1:7,2:12:32.68:607,33,0	0/0:26,0:26:75.22:0,75,1271	0/0:14,0:14:42.09:0,42,708	0/0:22,0:22:63.19:0,63,1130	0/0:14,0:14:42.14:0,42,763	1/1:14,4:19:50.92:964,51,0	1/1:7,5:15:44.76:853,45,0	0/0:19,0:19:51.11:0,51,804	1/1:19,1:27:69.08:1305,69,0	1/1:13,8:24:52.28:1096,52,0	0/0:24,0:24:66.51:0,67,822	0/0:9,0:9:27.08:0,27,348	0/0:21,0:21:57.06:0,57,709	1/1:0,12:13:27.04:660,27,0	1/1:1,10:14:30.08:764,30,0	1/1:12,5:20:54.05:1093,54,0	1/1:6,5:12:30.02:688,30,0	0/0:25,0:25:72.15:0,72,917	0/0:21,0:21:47.49:0,47,601	0/0:9,0:9:27.08:0,27,350
chr10	102465345	.	GCA	G	7002.87	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=10.969;DP=536;FS=4.165;HRun=0;HaplotypeScore=84.0932;InbreedingCoeff=0.9890;MQ=64.42;MQ0=1;MQRankSum=-1.196;QD=31.69;ReadPosRankSum=4.196;VQSLOD=6.8350;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,117,1925	0/0:6,0:6:18.06:0,18,306	0/0:12,0:9:21.07:0,21,362	0/0:25,0:24:55.90:0,56,829	0/0:15,0:15:39.13:0,39,675	1/1:0,18:18:42.14:552,42,0	1/1:1,21:22:54.18:719,54,0	0/0:24,0:24:51.17:0,51,851	1/1:0,16:16:48.16:639,48,0	0/0:14,0:14:36.12:0,36,616	0/0:7,0:7:15.05:0,15,256	0/0:23,0:23:66.23:0,66,1129	0/0:19,0:19:57.20:0,57,983	1/1:4,20:23:57.19:758,57,0	1/1:1,16:17:48.16:639,48,0	0/0:17,0:17:48.16:0,48,826	1/1:3,26:29:60.20:799,60,0	1/1:2,27:29:81.27:1077,81,0	0/0:15,0:15:42.14:0,42,721	0/0:10,0:10:27.09:0,27,466	0/0:45,0:45:99:0,126,2117	1/1:4,3:7:12.04:159,12,0	1/1:0,7:7:18.06:240,18,0	1/1:3,33:36:78.25:1030,78,0	1/1:3,13:16:30.10:392,30,0	0/0:8,0:8:18.06:0,18,312	0/0:20,0:20:51.17:0,51,858	0/0:10,0:10:30.10:0,30,493
chr10	102465519	.	C	CA	3755.21	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=13.592;DP=360;FS=3.689;HRun=4;HaplotypeScore=57.5729;InbreedingCoeff=0.9185;MQ=61.13;MQ0=0;MQRankSum=-10.253;QD=34.14;ReadPosRankSum=-0.320;VQSLOD=4.0511;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,1394	0/0:7,0:7:21.06:0,21,238	0/0:6,0:6:15.02:0,15,151	0/0:3,0:3:5.98:0,6,68	0/0:11,0:11:27.06:0,27,295	1/1:3,13:16:45.06:571,45,0	1/1:1,4:5:15:183,15,0	0/0:32,0:32:81.23:0,81,918	1/1:1,10:11:27.09:368,27,0	0/0:19,0:19:51.14:0,51,579	0/0:11,0:11:30.07:0,30,331	0/0:14,0:14:39.11:0,39,442	0/0:16,0:16:39.11:0,39,439	1/1:0,11:11:30.10:408,30,0	1/1:1,8:9:24.08:328,24,0	0/0:7,0:7:21.06:0,21,238	1/1:5,15:20:46.39:611,46,0	1/1:1,17:20:53.20:699,53,0	0/0:17,0:17:45.13:0,45,510	0/0:12,0:12:36.09:0,36,398	0/0:2,0:2:3.01:0,3,34	./.	1/1:1,1:2:6.02:81,6,0	1/1:2,2:4:6.02:82,6,0	1/1:2,10:12:33.06:426,33,0	0/0:21,0:21:57.16:0,57,646	0/0:20,0:20:57.16:0,57,647	0/0:8,0:8:21.06:0,21,238
chr10	102465528	.	TAAC	T	3958.01	PASS	AC=20;AF=0.385;AN=52;BaseQRankSum=13.422;DP=343;FS=2.313;HRun=0;HaplotypeScore=71.1876;InbreedingCoeff=0.9231;MQ=59.44;MQ0=0;MQRankSum=-9.408;QD=37.34;ReadPosRankSum=1.379;VQSLOD=4.3201;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,2628	0/0:7,0:7:21.07:0,21,464	0/0:5,0:5:12.04:0,12,231	0/0:3,0:3:2.72:0,3,66	0/0:12,0:12:36.11:0,36,746	1/1:1,15:16:42.14:672,42,0	1/1:1,3:4:11.97:162,12,0	0/0:26,0:26:75.26:0,75,1610	1/1:1,8:9:21.07:336,21,0	0/0:22,0:22:57.20:0,57,1249	0/0:11,0:11:33.11:0,33,727	0/0:10,0:10:27.09:0,27,596	0/0:15,0:15:42.14:0,42,884	1/1:1,9:10:30.03:449,30,0	1/1:4,4:8:24.03:292,24,0	0/0:7,0:7:21.07:0,21,446	1/1:5,16:21:37.97:609,38,0	1/1:6,14:20:51.13:799,51,0	0/0:14,0:14:39.13:0,39,853	0/0:11,0:11:33.10:0,33,666	./.	./.	1/1:1,1:2:3.01:48,3,0	1/1:0,4:4:9.03:144,9,0	1/1:1,11:12:30.03:448,30,0	0/0:20,0:20:54.17:0,54,1115	0/0:20,0:20:54.19:0,54,1191	0/0:10,0:10:30.10:0,30,658
chr10	102465668	.	TTAA	T	1886.90	PASS	AC=20;AF=0.400;AN=50;BaseQRankSum=8.530;DP=230;FS=20.728;HRun=0;HaplotypeScore=38.1438;InbreedingCoeff=0.7314;MQ=64.99;MQ0=0;MQRankSum=0.054;QD=24.19;ReadPosRankSum=4.020;VQSLOD=1.6295;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:21.07:0,21,397	./.	0/0:5,0:4:6.02:0,6,92	0/0:1,0:1:2.96:0,3,19	0/0:12,0:12:27.08:0,27,507	1/1:1,11:12:24.08:356,24,0	1/1:0,2:2:3.01:44,3,0	0/0:41,0:41:81.24:0,81,1487	1/1:1,3:4:6.02:89,6,0	0/0:6,0:6:15.05:0,15,272	0/0:7,0:7:12.04:0,12,250	0/0:5,0:5:9.03:0,9,179	0/0:2,0:2:6.02:0,6,116	1/1:1,2:3:6.02:89,6,0	1/1:1,3:4:3.01:44,3,0	0/0:6,0:6:9.03:0,9,188	1/1:4,23:27:48.16:712,48,0	1/1:4,15:19:33.43:489,33,0	0/0:13,0:13:27.09:0,27,556	./.	0/0:2,0:2:3.01:0,3,63	1/1:0,1:1:3.01:44,3,0	./.	1/1:1,0:1:2.94:18,3,0	1/1:0,5:5:12.04:178,12,0	0/0:9,0:9:21.05:0,21,344	0/0:8,0:8:21.07:0,21,415	0/0:20,0:20:42:0,42,809
chr10	102466671	.	GC	G	7081.26	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=18.770;DP=708;FS=13.305;HRun=7;HaplotypeScore=90.4131;InbreedingCoeff=0.9990;MQ=82.60;MQ0=0;MQRankSum=-2.692;QD=24.85;ReadPosRankSum=3.592;VQSLOD=4.2096;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,102,1242	0/0:7,0:7:21.06:0,21,252	0/0:30,0:30:53.13:0,53,806	0/0:16,0:16:39.08:0,39,455	0/0:15,0:15:36.11:0,36,452	1/1:4,18:22:54.12:551,54,0	1/1:5,20:25:51.11:520,51,0	0/0:20,0:20:45.14:0,45,555	1/1:1,27:28:28.41:605,28,0	0/0:22,0:22:60.19:0,60,755	0/0:21,0:21:63.20:0,63,788	0/0:23,0:23:60.18:0,60,741	0/0:26,0:26:72.23:0,72,902	1/1:1,21:22:57.13:581,57,0	1/1:2,25:27:72.16:735,72,0	0/0:29,1:31:62.54:0,63,1065	1/1:2,30:32:87.20:887,87,0	1/1:4,24:28:69.16:704,69,0	0/0:28,0:28:72.23:0,72,904	0/0:18,0:18:48.15:0,48,604	0/0:43,0:43:99:0,117,1457	1/1:0,24:24:69.12:693,69,0	1/1:1,26:27:60.14:612,60,0	1/1:3,24:27:62.98:642,63,0	1/1:2,21:23:54.12:551,54,0	0/0:36,0:36:99:0,105,1261	0/0:36,0:36:99:0,105,1316	0/0:8,0:8:24.06:0,24,286
chr10	102467323	.	GT	G	5642.57	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-7.642;DP=620;FS=0.341;HRun=2;HaplotypeScore=106.0865;InbreedingCoeff=0.9977;MQ=73.38;MQ0=0;MQRankSum=-0.518;QD=32.24;ReadPosRankSum=1.921;VQSLOD=4.5512;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:75.24:971,75,0	0/0:9,0:9:24.08:0,24,356	0/0:12,0:12:31.78:0,32,370	0/0:15,0:15:18.14:0,18,387	0/0:30,0:30:87.23:0,87,1236	0/0:20,0:20:60.17:0,60,812	0/0:28,0:28:77.01:0,77,975	1/1:1,20:21:56.93:658,57,0	0/0:24,0:24:65.94:0,66,874	0/0:18,0:18:51.17:0,51,745	0/0:17,0:17:51.16:0,51,729	0/0:19,0:19:54.14:0,54,743	0/0:24,0:24:72.24:0,72,1050	0/0:21,0:21:59.44:0,59,678	0/0:24,0:24:72.22:0,72,959	0/0:24,0:24:72.24:0,72,1058	0/0:28,0:27:78.16:0,78,925	0/0:22,0:22:63.18:0,63,806	1/1:0,18:18:54.12:643,54,0	1/1:1,25:26:63.13:777,63,0	1/1:0,28:28:66.21:856,66,0	0/0:19,0:19:56.13:0,56,658	0/0:32,0:32:70.76:0,71,993	0/0:30,0:30:74.85:0,75,896	0/0:29,0:29:84.20:0,84,1093	1/1:1,17:18:26.26:634,26,0	1/1:1,23:24:63.10:793,63,0	1/1:0,8:8:24.08:311,24,0
chr10	102467332	.	TC	T	6635.51	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=0.800;DP=602;FS=3.282;HRun=7;HaplotypeScore=99.2050;InbreedingCoeff=0.9978;MQ=73.64;MQ0=0;MQRankSum=-1.884;QD=25.62;ReadPosRankSum=3.215;VQSLOD=5.1412;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:83.53:0,84,908	0/0:7,0:7:21.07:0,21,264	0/0:15,0:15:40.62:0,41,458	0/0:15,0:15:17.48:0,17,263	0/0:29,0:29:78.24:0,78,968	1/1:1,18:19:51.12:520,51,0	1/1:5,26:31:69.15:704,69,0	0/0:23,0:23:50.02:0,50,525	1/1:1,25:26:60.13:612,60,0	0/0:17,0:17:48.15:0,48,593	0/0:20,0:20:57.18:0,57,712	0/0:18,0:18:48.15:0,48,601	0/0:22,0:22:66.21:0,66,826	1/1:1,20:21:57.13:580,57,0	1/1:2,20:22:60.13:612,60,0	0/0:23,0:23:63.20:0,63,792	1/1:2,21:23:54.12:551,54,0	1/1:1,20:21:54.12:551,54,0	0/0:19,0:19:39.07:0,39,443	0/0:27,0:27:56.42:0,56,679	0/0:26,0:26:66.16:0,66,749	1/1:2,17:19:42.09:427,42,0	1/1:0,27:27:75.17:764,75,0	1/1:1,23:24:57.13:580,57,0	1/1:0,26:26:72.16:734,72,0	0/0:18,0:18:54.03:0,54,604	0/0:25,0:25:74.99:0,75,781	0/0:8,0:8:24.07:0,24,272
chr10	102468956	.	A	AGGCAGCAGCC	9538.04	PASS	AB=0.708;AC=9;AF=0.161;AN=56;BaseQRankSum=14.290;DP=650;FS=14.471;HRun=0;HaplotypeScore=258.1886;InbreedingCoeff=0.1975;MQ=84.23;MQ0=0;MQRankSum=-14.189;QD=78.83;ReadPosRankSum=0.384;VQSLOD=3.4647;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,9:22:14.46:1810,0,14	0/0:12,0:12:36.11:0,36,1176	0/0:27,0:27:78.01:0,78,2177	0/0:17,0:17:48.11:0,48,1280	0/0:22,0:22:66.23:0,66,2168	0/0:26,0:26:75.24:0,75,2497	0/0:38,0:38:99:0,114,3430	1/1:22,0:22:15.78:1604,16,0	0/0:28,0:28:84.26:0,84,2736	0/0:24,0:24:69.21:0,69,2086	0/0:17,0:17:51.18:0,51,1666	0/0:33,0:33:99:0,99,3205	0/0:37,0:37:99:0,111,3747	0/0:29,0:29:84.26:0,84,2645	0/0:33,0:33:99:0,99,3160	0/0:38,0:38:99:0,114,3855	0/0:23,0:23:69.14:0,69,2242	0/0:29,0:30:90.28:0,90,2739	0/1:9,2:11:19.21:802,0,19	0/1:11,6:17:20.77:1224,0,21	0/1:12,4:16:75.85:730,0,76	0/0:23,0:23:69.15:0,69,2118	0/0:24,0:24:66.20:0,66,2103	0/0:32,0:32:93.24:0,93,2906	0/0:16,0:16:45.15:0,45,1571	0/1:6,8:14:23.83:1252,0,24	0/1:7,7:14:8.49:1545,0,8	0/1:1,4:5:0.80:571,0,1
chr10	102468957	.	T	TAACAC	7641.50	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.107;DP=661;FS=7.520;HRun=0;HaplotypeScore=206.0576;InbreedingCoeff=0.9972;MQ=83.79;MQ0=0;MQRankSum=-15.146;QD=61.13;ReadPosRankSum=-3.436;VQSLOD=3.8203;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,9:23:54.17:1233,54,0	0/0:12,0:12:36.12:0,36,781	0/0:27,0:27:78.02:0,78,1567	0/0:17,0:17:51.17:0,51,984	0/0:23,0:23:66.23:0,66,1437	0/0:26,0:26:78.25:0,78,1695	0/0:37,0:37:99:0,108,2301	1/1:24,0:24:66.22:1674,66,0	0/0:29,0:29:84.29:0,84,1853	0/0:25,0:25:69.22:0,69,1448	0/0:17,0:17:48.12:0,48,1021	0/0:35,0:35:96.33:0,96,2122	0/0:38,0:38:99:0,108,2365	0/0:29,0:29:84.29:0,84,1839	0/0:32,0:32:96.33:0,96,2108	0/0:38,0:38:99:0,114,2499	0/0:25,0:25:69.22:0,69,1494	0/0:31,0:31:84.13:0,84,1733	1/1:10,2:12:29.86:807,30,0	1/1:12,5:17:48.14:952,48,0	1/1:12,4:16:39.17:688,39,0	0/0:23,0:23:69.21:0,69,1453	0/0:23,0:23:63.22:0,63,1389	0/0:32,0:32:96.24:0,96,1997	0/0:17,0:17:45.15:0,45,1003	1/1:6,8:14:42.06:1007,42,0	1/1:7,7:14:39.09:906,39,0	1/1:1,4:5:15.05:375,15,0
chr10	102468983	.	GA	G	5002.28	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.938;DP=688;FS=4.863;HRun=2;HaplotypeScore=122.8838;InbreedingCoeff=0.9980;MQ=80.97;MQ0=0;MQRankSum=-9.177;QD=30.32;ReadPosRankSum=-3.188;VQSLOD=3.4437;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:57.13:719,57,0	0/0:9,0:9:27.09:0,27,405	0/0:24,0:24:24.13:0,24,704	0/0:16,0:16:20.38:0,20,525	0/0:22,0:22:66.17:0,66,909	0/0:23,0:23:69.20:0,69,975	0/0:32,0:32:90.30:0,90,1345	1/1:4,21:25:57.17:726,57,0	0/0:30,0:30:84.27:0,84,1235	0/0:26,0:26:75.25:0,75,1123	0/0:17,0:17:51.13:0,51,739	0/0:32,0:32:93.29:0,93,1338	0/0:30,0:30:90.29:0,90,1311	0/0:32,0:32:90.26:0,90,1324	0/0:28,0:28:84.28:0,84,1242	0/0:37,0:37:99:0,111,1645	0/0:35,0:35:99:0,102,1484	0/0:28,0:28:81.23:0,81,1188	1/1:0,20:20:60.18:764,60,0	1/1:0,18:18:35.24:500,35,0	1/1:1,30:31:50.84:661,51,0	0/0:23,0:23:69.15:0,69,983	0/0:26,0:26:69.22:0,69,1013	0/0:36,0:36:99:0,105,1549	0/0:17,0:17:51.16:0,51,745	1/1:1,21:22:60.19:777,60,0	1/1:1,16:17:45.15:583,45,0	1/1:0,7:7:21.07:272,21,0
chr10	102469211	.	AACG	A	2232.95	PASS	AB=0.953;AC=20;AF=0.357;AN=56;BaseQRankSum=2.249;DP=562;FS=0.820;HRun=0;HaplotypeScore=203.5357;InbreedingCoeff=-0.1490;MQ=83.83;MQ0=0;MQRankSum=-6.369;QD=6.57;ReadPosRankSum=-2.508;VQSLOD=2.2920;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:92.42:116,0,92	0/0:10,0:10:30.10:0,30,677	0/0:21,0:21:60.15:0,60,1177	0/0:26,0:26:66.21:0,66,1459	0/0:28,0:28:84.24:0,84,1846	0/1:18,0:18:94.68:102,0,95	1/1:25,0:25:5.08:387,5,0	1/1:24,0:24:45.06:463,45,0	0/1:25,0:25:65.21:65,0,201	0/0:25,0:25:75.22:0,75,1656	0/0:23,0:23:69.20:0,69,1483	0/0:17,0:17:50.96:0,51,1041	0/0:21,0:21:63.20:0,63,1404	0/1:24,0:24:99:122,0,150	0/1:18,0:18:83.22:101,0,83	0/0:24,0:24:66.20:0,66,1441	0/1:21,0:21:74.97:202,0,75	0/1:13,0:13:23.31:154,0,23	0/1:7,5:12:69.98:109,0,70	0/0:7,19:26:17.61:0,18,112	1/1:8,0:8:6.01:73,6,0	0/1:8,11:19:18.30:74,0,18	0/1:16,0:16:42.18:131,0,42	0/1:26,0:26:26.84:27,0,82	0/1:24,0:24:86.09:86,0,157	0/1:21,0:20:99:116,0,105	0/1:17,0:17:76.97:77,0,94	0/0:1,0:1:2.84:0,3,14
chr10	102469212	.	A	ATGATGGTAGTAG	34791.30	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=16.260;DP=558;FS=3.982;HRun=0;HaplotypeScore=241.8039;InbreedingCoeff=0.8821;MQ=82.01;MQ0=0;MQRankSum=-15.791;QD=89.44;ReadPosRankSum=1.641;VQSLOD=4.7638;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,11:27:75.22:3076,75,0	0/0:10,0:10:30.09:0,30,1022	0/0:20,0:20:60.10:0,60,1671	0/0:24,0:24:66.17:0,66,2076	0/0:28,0:28:84.25:0,84,2866	1/1:11,6:18:48.08:1689,48,0	1/1:17,8:25:75.19:2524,75,0	1/1:25,0:25:66.21:2326,66,0	1/1:11,13:25:72.25:3647,72,0	0/0:25,0:25:75.21:0,75,2433	0/0:23,0:23:69.20:0,69,2378	0/0:17,0:17:50.95:0,51,1622	0/0:22,0:22:63.19:0,63,2182	1/1:11,11:23:63.11:2678,63,0	1/1:9,9:18:51.08:2156,51,0	0/1:25,0:25:99:173,0,2239	1/1:13,7:21:48.11:1673,48,0	1/1:10,3:13:36.08:1647,36,0	1/1:7,5:12:29.98:1048,30,0	1/1:22,4:26:17.94:790,18,0	1/1:8,0:8:15.04:472,15,0	1/1:12,6:18:15.01:535,15,0	1/1:11,5:16:36.04:1384,36,0	1/1:17,9:26:26.11:1367,26,0	1/1:12,13:25:63.17:2726,63,0	1/1:11,9:19:54.18:2702,54,0	1/1:10,7:17:45.08:2011,45,0	1/1:0,1:1:3.01:166,3,0
chr10	102469213	.	C	CATT	10096.26	PASS	AB=0.798;AC=22;AF=0.393;AN=56;BaseQRankSum=15.235;DP=698;FS=19.065;HRun=0;HaplotypeScore=276.7913;InbreedingCoeff=-0.2550;MQ=75.10;MQ0=0;MQRankSum=-15.110;QD=20.07;ReadPosRankSum=3.402;VQSLOD=3.5660;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:27,11:38:99:557,0,126	0/0:12,0:12:30.10:0,30,542	0/0:21,0:21:60.18:0,60,1017	0/0:24,0:24:63.21:0,63,1099	0/0:28,0:28:84.24:0,84,1507	0/1:17,7:24:99:442,0,102	0/1:28,8:36:99:582,0,283	0/1:48,0:48:99:918,0,598	0/1:15,13:29:32.37:820,0,32	0/0:25,0:25:75.26:0,75,1379	0/0:21,0:21:60.21:0,60,1118	0/0:17,0:17:51.17:0,51,888	0/0:22,0:22:60.21:0,60,1106	0/1:16,12:28:33.50:801,0,33	1/1:18,9:27:0.27:761,0,0	0/0:25,0:25:66.18:0,66,1176	0/1:19,8:27:99:432,0,197	0/1:16,3:19:99:376,0,248	0/1:12,5:17:63.81:475,0,64	1/1:30,4:35:38.96:543,39,0	0/1:11,0:11:45.06:83,0,45	0/1:23,5:29:99:419,0,99	0/1:13,5:18:54.17:277,0,54	0/1:20,9:29:32.07:362,0,32	0/1:22,13:35:65.62:887,0,66	0/1:18,9:26:99:698,0,199	0/1:15,7:22:67.40:560,0,67	1/1:3,1:4:9.02:103,9,0
chr10	102469661	.	AATCCATCCATCCATTCATCC	A	6202.35	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=4.706;DP=701;FS=2.389;HRun=0;HaplotypeScore=293.9557;InbreedingCoeff=0.6168;MQ=75.89;MQ0=3;MQRankSum=-0.293;QD=17.72;ReadPosRankSum=1.920;VQSLOD=3.2518;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:8.06:0,8,107	0/0:8,0:8:18.05:0,18,1130	0/0:40,0:32:62.72:0,63,645	0/0:37,0:32:61.52:0,62,558	0/0:16,0:16:36.07:0,36,1905	1/1:4,18:22:9.03:382,9,0	1/1:19,0:19:39:528,39,0	0/1:36,0:36:99:364,0,157	1/1:5,23:28:18.06:844,18,0	0/0:19,0:19:51.07:0,51,1627	0/0:19,0:19:50.84:0,51,2118	0/0:32,0:32:75.17:0,75,3380	0/0:29,0:29:72.16:0,72,4079	1/1:5,18:23:12.04:563,12,0	1/1:5,27:32:18.06:793,18,0	0/0:27,0:27:63.09:0,63,2900	1/1:7,0:26:8.70:140,9,0	1/1:12,0:12:7.74:133,8,0	0/1:15,0:15:99:105,0,443	0/1:22,0:22:50.85:51,0,534	0/0:39,0:39:3.01:0,3,84	1/1:1,20:21:20.96:459,21,0	1/1:1,14:15:20.90:620,21,0	1/1:35,0:35:80.82:820,81,0	1/1:4,12:16:3.01:146,3,0	0/1:28,0:28:99:253,0,941	0/0:29,0:29:33.11:0,33,893	0/0:26,0:26:15.05:0,15,392
chr10	102469668	.	CCATCCATT	C	6287.44	PASS	AB=0.768;AC=36;AF=0.643;AN=56;BaseQRankSum=12.445;DP=678;FS=3.431;HRun=0;HaplotypeScore=160.4768;InbreedingCoeff=0.7717;MQ=70.35;MQ0=6;MQRankSum=-2.262;QD=13.76;ReadPosRankSum=-0.158;VQSLOD=3.5930;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:4,26:30:3.60:65,0,4	0/0:7,0:7:21.05:0,21,594	0/0:34,0:26:56.20:0,56,629	0/0:32,0:27:61.38:0,61,557	0/0:16,0:16:39.08:0,39,1042	1/1:21,0:21:6.49:117,6,0	1/1:15,0:15:38.87:320,39,0	0/1:39,0:35:19.28:368,0,19	1/1:27,0:27:15.52:273,16,0	0/0:24,0:24:66.03:0,66,1177	0/0:21,0:21:59.86:0,60,1270	0/0:34,0:34:85.97:0,86,1938	0/0:28,0:28:72.14:0,72,1988	1/1:21,0:21:11.63:156,12,0	1/1:29,0:27:15.52:222,16,0	0/0:25,0:25:65.12:0,65,1476	1/1:25,0:25:11.87:155,12,0	1/1:9,0:9:23.52:176,24,0	1/1:0,13:13:38.94:563,39,0	1/1:1,23:24:38.35:573,38,0	1/1:5,34:39:2.67:18,3,0	1/1:20,0:20:9.86:82,10,0	1/1:14,0:14:8.20:67,8,0	1/1:33,0:33:80.80:674,81,0	1/1:13,0:13:3.01:44,3,0	1/1:2,26:28:53.02:1151,53,0	1/1:3,28:31:32.98:859,33,0	1/1:2,24:26:15.05:403,15,0
chr10	102469672	.	CCATT	C	4097.59	PASS	AB=0.818;AC=36;AF=0.643;AN=56;BaseQRankSum=12.698;DP=660;FS=2.775;HRun=0;HaplotypeScore=126.6588;InbreedingCoeff=0.7745;MQ=68.48;MQ0=9;MQRankSum=-1.781;QD=9.31;ReadPosRankSum=0.003;VQSLOD=3.1577;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:2.66:21,0,3	0/0:8,0:8:24.04:0,24,400	0/0:33,0:25:56.23:0,56,630	0/0:30,0:25:61.50:0,61,558	0/0:19,0:19:45.07:0,45,734	1/1:18,0:18:6.48:61,6,0	1/1:14,0:14:38.87:320,39,0	0/1:15,20:31:28.61:363,0,29	1/1:26,0:25:15.40:133,15,0	0/0:25,0:25:74.96:0,75,938	0/0:22,0:22:62.81:0,63,912	0/0:33,0:33:88.95:0,89,1303	0/0:26,0:26:72.13:0,72,1329	1/1:20,0:20:11.80:82,12,0	1/1:28,0:26:15.16:96,15,0	0/0:24,0:24:65.12:0,65,1034	1/1:23,0:23:11.90:101,12,0	1/1:10,0:10:26.88:209,27,0	1/1:14,0:14:24.93:342,25,0	1/1:24,0:24:38.44:311,38,0	1/1:37,0:37:2.70:18,3,0	1/1:20,0:20:9.73:55,10,0	1/1:14,0:14:7.97:33,8,0	1/1:33,0:33:80.80:674,81,0	1/1:13,0:12:2.92:17,3,0	1/1:28,0:27:53:720,53,0	1/1:30,0:30:33.08:365,33,0	1/1:24,0:24:15.04:178,15,0
chr10	102470331	.	G	GGATA	2138.37	PASS	AB=0.745;AC=14;AF=0.269;AN=52;BaseQRankSum=-8.828;DP=692;FS=1.423;HRun=0;HaplotypeScore=157.0008;InbreedingCoeff=0.6569;MQ=53.45;MQ0=13;MQRankSum=3.001;QD=9.34;ReadPosRankSum=-1.262;VQSLOD=3.1553;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,17:47:61.61:525,0,62	0/0:11,0:11:12.04:0,12,175	./.	./.	0/0:29,0:29:47.94:0,48,649	0/0:19,0:19:21.04:0,21,222	0/0:23,0:23:10.19:0,10,64	1/1:53,0:52:4.98:12,5,0	0/0:19,0:18:14.01:0,14,108	0/0:26,0:26:15.05:0,15,228	0/0:11,0:25:7.69:0,8,81	0/0:18,0:19:24.06:0,24,322	0/0:22,0:23:18.02:0,18,214	0/0:16,0:16:2.74:0,3,12	0/0:32,0:31:21.73:0,22,152	0/0:25,0:25:27.09:0,27,411	0/0:27,0:26:47.97:0,48,589	0/0:24,0:24:26.92:0,27,275	1/1:9,5:15:18.02:326,18,0	1/1:18,7:25:12.04:265,12,0	0/1:10,2:14:36.76:131,0,37	0/0:20,0:27:11.21:0,11,79	0/0:13,0:19:6.47:0,6,55	0/0:16,0:15:1.25:0,1,3	0/0:35,0:35:36.98:0,37,305	1/1:30,5:35:18.03:285,18,0	1/1:18,12:31:21.07:488,21,0	1/1:4,4:8:12.04:279,12,0
chr10	102470336	.	GATAGATA	G	2212.95	PASS	AB=0.834;AC=9;AF=0.161;AN=56;BaseQRankSum=11.904;DP=652;FS=2.858;HRun=0;HaplotypeScore=183.6027;InbreedingCoeff=-0.1968;MQ=53.10;MQ0=14;MQRankSum=-6.385;QD=11.12;ReadPosRankSum=2.503;VQSLOD=2.8589;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:85.23:0,85,1976	0/0:12,0:12:33.11:0,33,775	0/0:16,0:2:6.01:0,6,64	0/0:21,0:8:24.04:0,24,271	0/0:29,0:27:78.25:0,78,2295	0/1:14,5:19:83.10:373,0,83	0/1:20,2:22:99:142,0,148	0/0:52,0:51:99:0,154,2440	0/1:12,4:16:72.88:234,0,73	0/0:24,0:24:69.23:0,69,1534	0/0:25,0:25:39.10:0,39,480	0/0:18,0:18:54.17:0,54,1382	0/0:23,0:23:69.21:0,69,1438	0/1:14,1:15:54.69:55,0,204	0/1:22,10:31:99:476,0,148	0/0:24,0:24:72.24:0,72,2014	0/0:27,0:26:71.31:0,71,1698	0/0:22,0:22:65.17:0,65,1022	0/0:13,0:13:36.12:0,36,850	0/0:26,0:26:68.17:0,68,1449	0/0:13,0:13:33.11:0,33,709	0/1:19,6:25:99:251,0,155	0/1:14,3:18:80.92:114,0,81	0/1:13,1:13:29.70:30,0,63	0/1:26,11:37:99:679,0,99	0/0:31,0:30:90.30:0,90,1919	0/0:25,0:25:51.17:0,51,1275	0/0:8,0:8:24.08:0,24,657
chr10	102471032	.	C	CATAT	6695.55	PASS	AB=0.833;AC=38;AF=0.704;AN=54;BaseQRankSum=-0.294;DP=314;FS=14.645;HRun=0;HaplotypeScore=60.7983;InbreedingCoeff=0.7601;MQ=63.96;MQ0=2;MQRankSum=-2.260;QD=30.86;ReadPosRankSum=-2.181;VQSLOD=2.4397;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:2,0:4:0:0,0,0	0/0:8,0:8:24.06:0,24,390	./.	0/1:10,0:5:0.86:1,0,24	0/0:15,0:15:38.76:0,39,634	1/1:4,18:22:42.14:1022,42,0	1/1:1,4:6:6.02:154,6,0	1/1:22,0:34:67.31:353,67,0	1/1:1,1:2:3.01:77,3,0	0/0:18,0:18:48.14:0,48,745	0/0:15,0:15:45.14:0,45,747	0/0:14,0:14:27.08:0,27,446	0/0:12,0:12:27.09:0,27,456	1/1:0,8:8:15.05:387,15,0	1/1:4,10:14:27.09:633,27,0	0/0:10,0:10:24.08:0,24,421	1/1:6,25:31:51.17:1195,51,0	1/1:1,10:11:24.08:619,24,0	1/1:5,0:11:17.54:121,18,0	1/1:2,0:4:2.80:13,3,0	1/1:0,0:3:3:28,3,0	1/1:0,2:2:3.01:77,3,0	1/1:0,3:3:9.03:232,9,0	1/1:1,5:6:9.03:232,9,0	1/1:1,17:18:42.14:1076,42,0	1/1:2,0:10:22.53:152,23,0	1/1:1,0:6:6:52,6,0	1/1:2,0:11:32.73:269,33,0
chr10	102471039	.	ATG	A	575.37	PASS	AB=0.967;AC=9;AF=0.167;AN=54;BaseQRankSum=0.284;DP=339;FS=15.081;HRun=0;HaplotypeScore=79.8815;InbreedingCoeff=0.1732;MQ=59.96;MQ0=1;MQRankSum=-1.169;QD=5.70;ReadPosRankSum=-6.450;VQSLOD=-0.7600;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	./.	0/0:9,0:9:27.07:0,27,447	0/0:4,0:1:0.89:0,1,2	0/0:7,0:4:0.54:0,1,17	0/0:20,0:20:55.33:0,55,824	0/0:22,0:22:45.06:0,45,435	0/0:6,0:6:9:0,9,83	0/1:28,7:34:99:308,0,207	0/0:3,0:3:6:0,6,53	0/0:20,0:20:58.75:0,59,948	0/0:16,0:16:48.16:0,48,889	0/0:11,0:11:27.09:0,27,502	0/0:10,0:10:30.09:0,30,544	0/0:9,0:9:18.02:0,18,172	0/0:13,0:13:30.03:0,30,282	0/0:8,0:8:24.08:0,24,462	0/0:31,0:31:57.06:0,57,553	0/0:11,0:11:27.04:0,27,260	0/1:10,0:10:33.90:69,0,34	1/1:6,0:6:3:26,3,0	1/1:5,0:5:2.81:21,3,0	0/0:2,0:2:3:0,3,29	0/0:4,0:4:12.01:0,12,113	0/0:6,0:6:9.01:0,9,88	0/0:18,0:18:42.05:0,42,405	0/1:15,0:16:54.78:70,0,55	0/1:10,0:10:5.71:26,0,6	0/1:19,0:19:31.94:187,0,32
chr10	102471047	.	A	ATG	457.10	PASS	AB=0.972;AC=16;AF=0.286;AN=56;BaseQRankSum=10.729;DP=342;FS=8.630;HRun=0;HaplotypeScore=83.5189;InbreedingCoeff=-0.1301;MQ=61.39;MQ0=1;MQRankSum=0.087;QD=2.87;ReadPosRankSum=6.112;VQSLOD=0.3031;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:5.98:0,6,46	0/0:8,0:8:23.93:0,24,312	1/1:3,0:1:3.01:35,3,0	0/0:8,0:6:7.89:0,8,71	0/0:20,0:20:54.01:0,54,818	0/1:18,2:20:16.50:151,0,17	0/1:6,0:6:0.01:0,0,79	0/0:36,0:35:16.16:0,16,274	0/1:3,0:3:4.77:5,0,39	0/0:19,0:19:57.17:0,57,815	0/0:18,0:18:47.97:0,48,615	0/0:10,0:10:24.07:0,24,346	0/0:10,0:10:30.05:0,30,391	0/1:9,0:9:12.38:12,0,116	0/1:10,2:12:26.71:118,0,27	0/0:8,0:8:24.07:0,24,345	0/1:25,3:28:56.48:187,0,56	0/1:10,0:10:15.77:16,0,30	0/0:11,0:11:4.23:0,4,105	0/1:7,0:7:0.50:1,0,19	0/1:5,0:5:7.55:8,0,13	0/0:3,0:3:1.33:0,1,22	0/0:6,0:6:2.63:0,3,124	1/1:6,0:6:4.36:11,4,0	0/1:20,0:20:21.99:22,0,63	0/0:15,0:15:3.39:0,3,105	0/1:11,0:11:14:14,0,16	0/1:19,0:19:19.86:20,0,102
chr10	102471048	.	T	TATATATATATAC	6989.43	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-0.603;DP=343;FS=5.685;HRun=0;HaplotypeScore=127.0117;InbreedingCoeff=0.8463;MQ=61.31;MQ0=1;MQRankSum=-8.014;QD=60.25;ReadPosRankSum=-4.173;VQSLOD=3.5543;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:9.01:116,9,0	0/0:8,0:8:24.07:0,24,699	0/0:3,0:1:2.88:0,3,15	0/0:8,0:6:3.47:0,3,27	0/0:20,0:20:57.18:0,57,1552	0/0:20,0:20:40.79:0,41,736	0/0:6,0:6:12.04:0,12,228	1/1:35,0:35:63.12:1999,63,0	0/0:3,0:3:5.89:0,6,88	0/0:19,0:19:57.17:0,57,1642	0/0:17,0:17:36.12:0,36,1147	0/0:10,0:10:24.07:0,24,772	0/0:10,0:10:24.06:0,24,710	0/0:10,0:10:17.81:0,18,368	0/0:12,0:12:30.10:0,30,572	0/0:8,0:8:21.07:0,21,680	0/0:28,0:28:51.24:0,51,978	0/0:10,0:10:27.09:0,27,484	1/1:8,3:11:27.09:869,27,0	1/1:7,0:7:2.94:24,3,0	1/1:4,1:5:8.96:245,9,0	0/0:3,0:3:6.01:0,6,79	0/0:6,0:6:18.06:0,18,330	0/0:6,0:6:12.02:0,12,184	0/0:20,0:20:39.10:0,39,804	1/1:14,2:15:33.54:917,34,0	1/1:9,2:11:18.03:633,18,0	1/1:11,8:19:54.19:2186,54,0
chr10	102471154	.	CA	C	3541.68	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=10.046;DP=418;FS=1.346;HRun=9;HaplotypeScore=41.4087;InbreedingCoeff=0.9862;MQ=83.18;MQ0=0;MQRankSum=-1.516;QD=23.00;ReadPosRankSum=2.853;VQSLOD=4.1526;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:72.18:0,72,817	0/0:7,0:7:18.05:0,18,208	0/0:11,0:11:31.64:0,32,340	0/0:15,0:15:21.15:0,21,214	0/0:24,0:24:69.19:0,69,786	1/1:1,27:28:78.04:714,78,0	1/1:1,17:18:48.02:439,48,0	0/0:20,0:20:48.14:0,48,554	1/1:0,12:12:33.02:302,33,0	0/0:17,0:17:45.13:0,45,519	0/0:20,0:20:51.13:0,51,570	0/0:15,0:15:39.12:0,39,449	0/0:12,0:12:33.09:0,33,371	1/1:1,11:12:33.02:302,33,0	1/1:1,11:12:30.02:275,30,0	0/0:10,0:10:30.06:0,30,325	1/1:3,13:16:33.02:302,33,0	1/1:1,14:15:39.02:357,39,0	0/0:16,1:17:17.64:0,18,444	0/0:22,0:22:30.52:0,31,565	0/0:7,0:7:18.05:0,18,203	1/1:3,7:10:21.01:192,21,0	1/1:2,11:13:30.01:275,30,0	1/1:1,11:12:33.01:302,33,0	1/1:0,6:6:9:82,9,0	0/0:13,0:15:35.77:0,36,375	0/0:14,0:13:36.11:0,36,415	0/0:9,0:9:27.07:0,27,301
chr10	102472578	.	ATT	A	4057.65	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=7.191;DP=493;FS=12.057;HRun=12;HaplotypeScore=66.6531;InbreedingCoeff=0.9826;MQ=74.99;MQ0=3;MQRankSum=-1.485;QD=21.02;ReadPosRankSum=5.684;VQSLOD=1.5397;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:36:84.19:0,84,1119	0/0:8,0:9:23.57:0,24,322	0/0:21,0:17:34.91:0,35,391	0/0:11,0:10:9.03:0,9,110	0/0:18,0:18:42.13:0,42,609	1/1:3,12:15:28.77:303,29,0	1/1:3,13:16:39.08:397,39,0	0/0:23,0:23:51.15:0,51,710	1/1:1,12:13:36.08:366,36,0	0/0:15,0:15:35.68:0,36,459	0/0:11,0:12:30.47:0,30,414	0/0:17,0:17:48.10:0,48,653	0/0:13,0:13:33.10:0,33,465	1/1:4,12:16:33.04:335,33,0	1/1:2,5:7:12.01:122,12,0	0/0:20,1:22:14.62:0,15,560	1/1:12,24:36:60.05:610,60,0	1/1:2,17:20:44.83:439,45,0	0/0:21,0:23:59.64:0,60,784	0/0:20,0:21:51.14:0,51,706	0/0:17,0:17:39.11:0,39,560	1/1:3,11:15:20.74:266,21,0	1/1:1,12:13:26.48:274,26,0	1/1:3,20:23:57.10:580,57,0	1/1:1,18:19:36.07:366,36,0	0/0:13,0:16:41.09:0,41,517	0/0:16,0:16:36.08:0,36,478	0/0:8,0:9:20.56:0,21,276
chr10	102472804	.	CCG	C	975.30	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=8.015;DP=422;FS=1.507;HRun=0;HaplotypeScore=62.4553;InbreedingCoeff=0.4527;MQ=79.63;MQ0=0;MQRankSum=-1.438;QD=7.22;ReadPosRankSum=-2.726;VQSLOD=2.7357;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.28:0,96,1582	0/0:9,0:9:26.89:0,27,402	0/0:14,0:13:25.67:0,26,455	0/0:13,0:12:27.03:0,27,408	0/0:14,0:14:39.12:0,39,658	0/1:11,0:11:64.62:65,0,119	0/1:27,0:27:99:167,0,149	0/0:22,0:22:53.03:0,53,805	0/0:6,0:6:2.52:0,3,52	0/0:13,0:13:39.08:0,39,626	0/0:8,0:8:24.08:0,24,398	0/0:19,0:19:57.09:0,57,904	0/0:15,0:15:45.14:0,45,762	0/1:8,0:8:26.94:27,0,79	1/1:9,1:10:22.97:115,23,0	0/0:14,0:14:39.09:0,39,591	1/1:20,2:22:55.81:322,56,0	1/1:19,2:21:40.56:210,41,0	0/0:16,0:16:42.11:0,42,683	0/0:16,0:16:48.11:0,48,774	0/0:28,0:28:84.07:0,84,1316	0/0:4,0:4:5.91:0,6,38	0/1:13,0:13:57.08:94,0,57	0/1:16,0:16:59.58:60,0,100	1/1:7,0:7:13.98:92,14,0	0/0:16,0:16:45.15:0,45,779	0/0:15,0:15:45.10:0,45,747	0/0:13,0:13:36.06:0,36,599
chr10	102472805	.	CG	C	2498.62	PASS	AB=0.951;AC=15;AF=0.268;AN=56;BaseQRankSum=3.944;DP=418;FS=2.654;HRun=1;HaplotypeScore=48.3693;InbreedingCoeff=0.5568;MQ=77.95;MQ0=0;MQRankSum=-0.971;QD=18.24;ReadPosRankSum=-2.769;VQSLOD=3.0552;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.22:0,96,1241	0/0:9,0:9:26.89:0,27,323	0/0:12,0:11:28.31:0,28,361	0/0:13,0:12:29.83:0,30,329	0/0:15,0:15:39.11:0,39,526	0/1:11,0:11:33.96:71,0,34	0/1:22,4:26:11.03:278,0,11	0/0:21,0:21:52.43:0,52,666	0/1:6,0:6:15.02:55,0,15	0/0:13,0:13:39.08:0,39,503	0/0:8,0:8:24.04:0,24,297	0/0:20,0:20:59.15:0,59,742	0/0:15,0:15:45.14:0,45,606	0/1:8,0:8:13.05:32,0,13	1/1:1,9:10:27.04:354,27,0	0/0:14,0:14:39.07:0,39,473	1/1:6,16:22:66:798,66,0	1/1:2,18:20:48.05:622,48,0	0/0:14,0:14:41.48:0,41,530	0/0:16,0:16:48.10:0,48,619	0/0:29,0:29:87.06:0,87,1083	0/0:4,0:4:3.06:0,3,8	1/1:12,0:12:9:155,9,0	0/1:14,2:16:4.07:159,0,4	1/1:4,2:6:15.01:159,15,0	0/0:17,0:17:48.13:0,48,633	0/0:15,0:15:45.09:0,45,591	0/0:14,0:14:36.05:0,36,476
chr10	102474273	.	G	GCAA	4141.07	PASS	AC=34;AF=0.630;AN=54;BaseQRankSum=0.774;DP=360;FS=18.782;HRun=0;HaplotypeScore=69.3236;InbreedingCoeff=0.7210;MQ=93.96;MQ0=7;MQRankSum=-5.003;QD=17.70;ReadPosRankSum=-1.894;VQSLOD=1.5284;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,10:15:8.94:107,9,0	0/0:1,0:1:3.01:0,3,51	0/0:29,0:20:48.56:0,49,736	0/0:36,0:25:53.58:0,54,791	0/0:7,0:7:18.06:0,18,304	./.	1/1:5,11:16:6.25:89,6,0	1/1:25,0:24:60.19:1328,60,0	1/1:16,0:16:3.01:65,3,0	0/0:5,0:5:9.50:0,10,154	0/0:4,0:3:6.02:0,6,102	0/0:8,0:8:24.08:0,24,406	0/0:13,0:13:33.11:0,33,559	1/1:12,3:15:15.27:230,15,0	1/1:7,0:7:3.48:55,3,0	0/0:8,0:8:21.07:0,21,355	1/1:9,0:8:3.01:54,3,0	1/1:4,0:4:6.02:119,6,0	1/1:13,0:11:17.98:375,18,0	1/1:6,0:5:6.02:133,6,0	1/1:8,19:28:3.85:22,4,0	1/1:2,14:16:23.57:282,24,0	1/1:6,0:6:8.98:150,9,0	1/1:6,17:21:2.02:18,2,0	1/1:9,1:10:24:439,24,0	1/1:8,2:9:24.07:498,24,0	1/1:13,1:14:12:176,12,0	0/0:2,3:3:0.47:0,0,1
chr10	102474274	.	C	CA	2284.74	PASS	AB=0.852;AC=29;AF=0.537;AN=54;BaseQRankSum=4.606;DP=373;FS=37.746;HRun=1;HaplotypeScore=70.9135;InbreedingCoeff=0.4557;MQ=91.74;MQ0=8;MQRankSum=-4.097;QD=9.56;ReadPosRankSum=0.153;VQSLOD=-0.6856;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:5.72:75,6,0	0/0:1,0:1:3.01:0,3,39	0/0:29,0:20:50.83:0,51,598	0/0:35,0:24:53.44:0,53,605	0/0:7,0:7:21.05:0,21,257	./.	0/1:17,0:17:9.22:36,0,9	1/1:7,20:25:46.25:802,46,0	1/1:16,0:16:2.92:17,3,0	0/0:4,0:4:9.50:0,10,117	0/0:6,0:5:6.02:0,6,78	0/0:11,0:11:24.08:0,24,311	0/0:16,0:16:33.09:0,33,425	1/1:7,8:15:12.62:143,13,0	1/1:7,0:7:2.92:17,3,0	0/0:9,0:9:21.07:0,21,272	1/1:9,0:8:2.92:17,3,0	1/1:4,0:4:5.91:58,6,0	0/1:6,8:11:21.32:221,0,21	0/1:3,3:5:12.78:73,0,13	0/1:28,0:28:12.80:13,0,29	1/1:14,1:15:9.21:200,9,0	1/1:5,2:7:5.76:96,6,0	0/1:22,1:21:3.82:14,0,4	1/1:6,5:11:21.39:284,21,0	1/1:9,2:10:23.95:281,24,0	1/1:13,1:14:11.96:121,12,0	0/0:5,0:3:2.04:0,2,6
chr10	102474275	.	A	AACACTCTCT	6323.54	PASS	AC=36;AF=0.667;AN=54;BaseQRankSum=-0.182;DP=426;FS=3.534;HRun=0;HaplotypeScore=110.7754;InbreedingCoeff=0.8034;MQ=84.90;MQ0=9;MQRankSum=-5.885;QD=21.44;ReadPosRankSum=-4.393;VQSLOD=2.5924;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:18:11.65:175,12,0	0/0:1,0:1:3.01:0,3,51	0/0:28,0:19:48.67:0,49,736	0/0:34,0:23:54.21:0,54,797	0/0:7,0:7:21.03:0,21,324	./.	1/1:18,0:18:11.30:181,11,0	1/1:26,0:24:63.18:1328,63,0	1/1:3,0:21:6.02:204,6,0	0/0:4,0:4:8.34:0,8,193	0/0:6,0:5:6.02:0,6,102	0/0:10,0:11:24.08:0,24,406	0/0:18,0:18:33.26:0,33,778	1/1:16,0:16:18.39:296,18,0	1/1:4,7:15:3.09:151,3,0	0/0:9,0:9:21.07:0,21,443	1/1:3,7:13:6.02:206,6,0	1/1:1,0:5:3.01:53,3,0	1/1:15,0:11:27.07:494,27,0	1/1:7,0:6:12.03:225,12,0	1/1:33,0:32:9.82:71,10,0	1/1:16,0:16:26.92:472,27,0	1/1:6,0:8:12:217,12,0	1/1:24,0:22:6.17:111,6,0	1/1:12,0:14:29.70:556,30,0	1/1:12,0:15:39.12:902,39,0	1/1:9,0:21:20.22:519,20,0	1/1:7,0:5:9:162,9,0
chr10	102474360	.	TCCTTCCCCTCCCCTCCTCTTTCTC	T	3692.46	PASS	AB=1.000;AC=31;AF=0.596;AN=52;BaseQRankSum=0.461;DP=363;FS=3.278;HRun=0;HaplotypeScore=175.1498;InbreedingCoeff=0.6072;MQ=83.05;MQ0=9;MQRankSum=-4.028;QD=23.82;ReadPosRankSum=1.729;VQSLOD=2.7268;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:8.99:271,9,0	0/0:4,0:4:12.04:0,12,519	0/0:39,0:13:7.85:0,8,111	0/0:89,0:44:6.02:0,6,88	0/0:6,0:6:12.04:0,12,772	1/1:11,0:9:15.05:341,15,0	1/1:14,0:14:7.26:69,7,0	0/1:20,0:20:8.34:49,0,8	1/1:12,0:11:12.04:421,12,0	0/0:9,0:9:9.01:0,9,242	0/0:8,0:8:18.06:0,18,852	0/0:8,0:8:9.07:0,9,103	0/0:3,0:3:3.01:0,3,44	1/1:9,0:9:5.69:59,6,0	1/1:13,0:13:10.28:390,10,0	0/0:7,0:7:15.05:0,15,670	1/1:4,0:3:6.02:284,6,0	1/1:2,0:2:3.01:37,3,0	./.	./.	1/1:8,0:7:3.01:50,3,0	0/0:2,11:13:1.25:0,1,3	1/1:3,6:9:0.47:1,0,0	1/1:6,1:7:9.03:369,9,0	1/1:5,6:11:3.01:161,3,0	1/1:3,4:7:9.03:287,9,0	1/1:11,1:12:21.06:769,21,0	1/1:4,0:4:3.01:135,3,0
chr10	102474384	.	C	CT	837.69	PASS	AB=0.872;AC=13;AF=0.232;AN=56;BaseQRankSum=3.961;DP=364;FS=15.744;HRun=1;HaplotypeScore=71.5497;InbreedingCoeff=-0.3272;MQ=76.63;MQ0=17;MQRankSum=-2.396;QD=8.05;ReadPosRankSum=-1.449;VQSLOD=-0.6694;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,2:13:66.39:66,0,229	0/0:4,0:4:12.04:0,12,168	0/0:72,0:22:12.43:0,12,330	0/0:101,0:35:11.20:0,11,366	0/0:11,0:11:30.10:0,30,413	0/0:8,0:6:18.04:0,18,225	0/1:7,1:5:32.67:33,0,133	0/0:3,0:3:2.88:0,3,79	0/1:7,3:8:99:111,0,114	0/0:6,0:6:18.06:0,18,239	0/0:6,0:6:18.06:0,18,252	0/0:5,0:5:15.04:0,15,195	0/0:5,0:5:15.03:0,15,192	0/1:5,1:6:66.10:66,0,114	0/1:12,2:12:0.93:1,0,367	0/0:7,0:7:18.06:0,18,252	0/1:6,0:4:65.39:83,0,65	0/1:3,1:4:25.97:101,0,26	0/0:8,0:6:15.03:0,15,178	0/1:2,1:3:36.67:37,0,70	0/1:7,0:6:32.65:75,0,33	0/0:11,0:11:4.12:0,4,40	0/0:8,0:8:5.77:0,6,38	0/1:5,2:6:35.19:35,0,99	0/1:9,0:9:35.60:36,0,96	0/1:5,0:5:29.77:120,0,30	0/1:8,3:12:99:220,0,188	0/0:4,0:4:9.03:0,9,119
chr10	102474388	.	T	TC	378.28	PASS	AB=0.930;AC=16;AF=0.296;AN=54;BaseQRankSum=1.035;DP=355;FS=18.154;HRun=4;HaplotypeScore=75.6929;InbreedingCoeff=-0.2606;MQ=76.19;MQ0=17;MQRankSum=-3.917;QD=3.38;ReadPosRankSum=2.238;VQSLOD=-0.6226;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:10,1:11:24.42:24,0,67	0/0:4,0:4:12.03:0,12,136	0/0:74,0:25:5.69:0,6,281	0/0:95,1:33:4.64:0,5,302	0/0:11,0:11:30.09:0,30,340	0/1:6,1:7:6.63:105,0,7	0/1:10,0:7:16.29:36,0,16	0/1:4,0:4:19.51:20,0,32	0/1:8,2:8:23.70:24,0,80	0/0:5,0:5:12.02:0,12,126	0/0:7,0:7:21.05:0,21,231	0/0:4,0:4:7.82:0,8,64	0/0:5,0:4:8.05:0,8,74	0/1:5,0:5:23.28:33,0,23	0/1:10,2:10:16.52:71,0,17	0/0:8,0:8:7.55:0,8,212	0/1:6,2:6:30.81:31,0,61	0/1:4,0:4:2.71:3,0,59	./.	0/0:5,0:5:2.74:0,3,12	0/1:7,0:6:18.76:19,0,25	0/0:12,0:12:7.18:0,7,43	0/0:7,0:7:2.93:0,3,24	0/1:6,1:6:23.32:23,0,28	0/1:7,0:7:0:0,0,0	0/1:5,0:5:15.35:15,0,27	0/1:11,2:13:19.74:92,0,20	1/1:1,1:2:3:26,3,0
chr10	102474395	.	C	CG	129.41	PASS	AB=0.886;AC=11;AF=0.204;AN=54;BaseQRankSum=4.310;DP=361;FS=21.285;HRun=0;HaplotypeScore=77.5277;InbreedingCoeff=-0.1117;MQ=80.25;MQ0=19;MQRankSum=-3.265;QD=1.68;ReadPosRankSum=2.089;VQSLOD=0.4435;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,1:8:8.46:8,0,208	0/0:4,0:4:12.03:0,12,153	0/0:80,0:30:8.38:0,8,411	0/0:96,0:34:40.20:0,40,352	0/0:12,0:12:33.11:0,33,461	0/1:4,1:5:41.17:49,0,41	0/0:12,0:9:26.96:0,27,330	0/0:5,0:5:10.51:0,11,86	0/1:8,2:8:24:24,0,201	0/0:3,0:3:9.02:0,9,110	0/0:7,0:7:18.06:0,18,252	0/0:4,0:4:12.02:0,12,150	0/0:3,0:2:6.01:0,6,68	0/1:5,0:5:8.23:8,0,109	0/1:7,2:7:52.78:53,0,117	0/0:9,0:9:27.07:0,27,344	0/1:9,2:9:12.47:12,0,189	0/0:5,0:5:14.93:0,15,166	./.	0/0:4,0:4:6:0,6,66	0/0:5,0:5:8.82:0,9,76	0/0:12,0:12:10.28:0,10,128	0/0:8,0:8:5.95:0,6,83	0/1:6,1:6:18.43:18,0,110	0/0:6,0:6:1.25:0,1,3	0/1:6,0:6:13.89:14,0,120	0/1:12,2:14:47.63:48,0,253	1/1:1,1:2:3.01:32,3,0
chr10	102474463	.	T	TTGTG	2448.16	PASS	AB=0.745;AC=16;AF=0.296;AN=54;BaseQRankSum=0.611;DP=474;FS=1.726;HRun=0;HaplotypeScore=109.4164;InbreedingCoeff=0.4316;MQ=61.42;MQ0=6;MQRankSum=-1.280;QD=10.93;ReadPosRankSum=-0.520;VQSLOD=2.7690;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,7:31:2.73:709,3,0	0/0:4,0:4:12.04:0,12,188	./.	0/1:37,0:22:0:0,0,0	0/0:8,0:11:21.03:0,21,251	0/0:9,0:10:18.06:0,18,284	0/0:22,0:25:39.09:0,39,552	1/1:6,0:5:3.01:42,3,0	0/0:17,0:19:17.47:0,17,320	0/0:8,0:8:5.82:0,6,75	0/0:10,0:10:12.03:0,12,171	0/0:10,0:10:18.04:0,18,242	0/0:14,0:14:27.09:0,27,428	0/0:17,0:18:20.52:0,21,422	0/0:13,0:14:36.11:0,36,523	0/0:9,0:9:20.81:0,21,313	0/1:22,0:31:94.94:140,0,95	0/1:13,0:25:79.38:79,0,277	0/1:9,3:11:31.01:167,0,31	0/1:2,6:10:32.83:205,0,33	1/1:26,5:38:23.73:906,24,0	0/0:22,0:24:45.14:0,45,672	0/0:10,0:10:24.08:0,24,378	0/0:15,0:22:51.13:0,51,682	0/0:8,0:8:21:0,21,303	1/1:7,0:11:17.07:103,17,0	1/1:9,2:12:17.77:258,18,0	0/1:4,0:7:6.53:7,0,42
chr10	102474965	.	GGTGTGTGTGTGT	G	3890.15	PASS	AB=0.908;AC=30;AF=0.600;AN=50;BaseQRankSum=7.772;DP=588;FS=15.458;HRun=0;HaplotypeScore=220.5005;InbreedingCoeff=0.4920;MQ=65.73;MQ0=14;MQRankSum=-5.047;QD=10.13;ReadPosRankSum=2.695;VQSLOD=0.8959;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:33:9.03:251,9,0	./.	0/0:30,0:16:3.01:0,3,43	./.	0/0:11,0:11:15.05:0,15,734	1/1:16,5:22:21.07:664,21,0	1/1:26,2:28:3.01:103,3,0	0/0:16,0:14:1.21:0,1,3	1/1:19,8:26:17.80:597,18,0	0/0:19,0:18:21.07:0,21,1050	0/0:13,0:15:15.05:0,15,673	0/0:17,0:19:15.05:0,15,556	0/0:15,0:15:21.52:0,22,928	1/1:20,3:25:15.05:475,15,0	1/1:20,13:33:15.04:513,15,0	0/1:13,0:14:22.64:23,0,741	1/1:22,1:23:2.43:102,2,0	0/1:26,0:26:4.87:213,0,5	0/0:22,0:21:1.25:0,1,3	./.	1/1:39,0:40:3.01:84,3,0	1/1:12,1:13:3.01:102,3,0	1/1:11,4:15:6.02:205,6,0	1/1:24,5:29:3.01:103,3,0	1/1:14,5:19:9.03:289,9,0	1/1:14,0:18:2.99:84,3,0	1/1:13,0:12:3.01:84,3,0	0/0:7,0:7:0.47:0,0,1
chr10	102477227	.	ATGGTGGTGGTGGTGGTGG	A	1532.96	PASS	AB=0.800;AC=19;AF=0.475;AN=40;BaseQRankSum=3.474;DP=284;FS=1.757;HRun=0;HaplotypeScore=142.5397;InbreedingCoeff=0.2914;MQ=81.27;MQ0=6;MQRankSum=-1.465;QD=14.06;ReadPosRankSum=2.260;VQSLOD=2.4074;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:3.01:0,3,62	0/0:4,0:4:3.01:0,3,219	./.	./.	./.	1/1:8,2:10:1.68:142,2,0	1/1:19,0:19:1.58:43,2,0	0/0:16,0:15:0:0,0,0	1/1:7,2:9:1.96:142,2,0	0/0:8,0:8:3.01:0,3,242	./.	0/0:4,0:4:3:0,3,27	0/0:6,0:5:3.01:0,3,252	0/0:6,0:6:0:0,0,0	1/1:14,4:16:9.83:573,10,0	./.	1/1:19,2:21:1.22:142,1,0	0/0:14,0:13:0:0,0,0	0/0:10,0:10:1.55:0,2,4	./.	./.	./.	1/1:6,1:7:3.01:144,3,0	1/1:5,1:6:3.01:144,3,0	1/1:5,2:7:6.02:265,6,0	0/0:7,0:9:1.18:0,1,35	1/1:4,0:8:8.56:42,9,0	0/1:3,0:4:7.86:8,0,78
chr10	102478085	.	A	ACG	1384.68	PASS	AB=1.000;AC=36;AF=0.818;AN=44;BaseQRankSum=2.501;DP=235;FS=10.681;HRun=0;HaplotypeScore=67.1190;InbreedingCoeff=0.2767;MQ=52.98;MQ0=0;MQRankSum=0.487;QD=7.37;ReadPosRankSum=-0.525;VQSLOD=1.4353;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:6.02:97,6,0	1/1:3,0:3:4.99:18,5,0	1/1:3,0:3:0.47:1,0,0	0/1:3,0:4:0.11:3,0,0	0/1:11,0:11:1.70:2,0,20	./.	1/1:14,0:14:2.83:21,3,0	1/1:16,0:16:37.23:232,37,0	1/1:0,9:9:3.01:46,3,0	0/1:12,0:12:5.49:5,0,51	./.	0/1:10,0:10:9.77:10,0,41	0/0:11,0:11:5.95:0,6,44	./.	1/1:13,0:13:5.93:40,6,0	0/0:6,0:6:1.95:0,2,23	1/1:7,0:7:2.94:18,3,0	1/1:6,0:6:11.14:102,11,0	1/1:11,0:11:25.67:190,26,0	1/1:6,0:6:8.84:72,9,0	1/1:12,0:12:5.65:59,6,0	./.	./.	1/1:6,0:6:2.98:21,3,0	1/1:7,0:7:20.90:257,21,0	1/1:1,16:19:23.95:265,24,0	1/1:10,0:10:8.62:46,9,0	./.
chr10	102478956	.	C	CT	63.59	PASS	AB=0.500;AC=5;AF=0.167;AN=30;BaseQRankSum=3.338;DP=250;FS=8.936;HRun=0;HaplotypeScore=51.3935;InbreedingCoeff=0.6218;MQ=52.00;MQ0=20;MQRankSum=-2.056;QD=10.60;ReadPosRankSum=-0.227;VQSLOD=2.6973;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:8.86:108,9,0	0/0:12,0:12:36.08:0,36,481	0/0:43,0:11:14.08:0,14,200	0/0:67,0:9:14.63:0,15,164	0/0:22,0:22:60.10:0,60,757	./.	./.	./.	./.	0/0:17,0:17:48.06:0,48,651	0/0:18,0:17:45.15:0,45,627	0/0:18,0:18:54.16:0,54,717	0/0:22,0:22:58.40:0,58,745	./.	./.	0/0:17,0:17:48.15:0,48,654	0/0:1,0:1:0.47:0,0,1	1/1:0,1:1:3.01:47,3,0	0/0:1,0:1:2.99:0,3,24	./.	./.	./.	./.	0/1:0,2:2:0.01:0,0,0	./.	0/0:1,0:1:3.01:0,3,42	./.	./.
chr10	102479028	.	CTTTCT	C	47.35	PASS	AC=8;AF=0.286;AN=28;BaseQRankSum=3.544;DP=342;FS=10.847;HRun=0;HaplotypeScore=96.3180;InbreedingCoeff=0.7040;MQ=58.81;MQ0=20;MQRankSum=-3.222;QD=9.47;ReadPosRankSum=1.508;VQSLOD=1.5390;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,1:2:3.01:43,3,0	0/0:11,0:11:33.11:0,33,1045	0/0:88,0:30:65.60:0,66,1634	0/0:119,0:44:71.52:0,72,2546	0/0:19,0:19:57.20:0,57,1738	./.	./.	./.	./.	0/0:26,0:26:78.27:0,78,2557	0/0:17,0:17:51.18:0,51,1614	0/0:18,0:18:51.17:0,51,1646	0/0:15,0:15:45.15:0,45,1475	./.	./.	0/0:21,0:21:63.22:0,63,2035	1/1:0,1:1:3.01:43,3,0	1/1:0,1:1:3.01:30,3,0	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:37,3,0	./.	0/0:2,0:2:6.02:0,6,194	./.	./.
chr10	102480072	.	G	GT	9186.71	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-2.140;DP=663;FS=5.672;HRun=1;HaplotypeScore=105.7699;InbreedingCoeff=0.9972;MQ=74.73;MQ0=0;MQRankSum=-1.665;QD=41.38;ReadPosRankSum=-2.881;VQSLOD=3.5836;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,55:56:99:2382,160,0	0/0:13,0:13:35.79:0,36,395	0/0:13,0:13:35.88:0,36,386	0/0:11,0:12:20.97:0,21,218	0/0:19,0:19:54.15:0,54,672	0/0:18,0:18:54.18:0,54,701	0/0:25,0:25:69.22:0,69,896	1/1:1,28:29:84.24:1233,84,0	0/0:26,0:26:75.21:0,75,944	0/0:19,0:19:57.18:0,57,728	0/0:18,0:18:54.18:0,54,700	0/0:27,0:27:81.25:0,81,1037	0/0:21,0:21:60.19:0,60,778	0/0:25,0:25:72.23:0,72,922	0/0:27,0:27:81.22:0,81,1007	0/0:21,0:21:63.20:0,63,816	0/0:43,0:43:99:0,129,1625	0/0:28,0:28:78.23:0,78,995	1/1:1,25:27:78.23:1112,78,0	1/1:0,20:20:54.12:783,54,0	1/1:0,40:40:99:1618,108,0	0/0:22,0:22:54.18:0,54,700	0/0:14,0:14:39.01:0,39,484	0/0:31,0:31:90.29:0,90,1168	0/0:19,0:19:54.16:0,54,687	1/1:2,19:21:21.24:814,21,0	1/1:0,22:21:66.22:988,66,0	1/1:1,6:7:18.06:257,18,0
chr10	102480907	.	CAGAGAG	C	2872.75	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=6.887;DP=642;FS=6.730;HRun=0;HaplotypeScore=150.3056;InbreedingCoeff=0.8552;MQ=69.14;MQ0=8;MQRankSum=-8.681;QD=10.08;ReadPosRankSum=-0.115;VQSLOD=2.2036;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:17:30.08:0,30,711	0/0:12,0:12:12.04:0,12,341	0/0:31,0:22:3.01:0,3,98	0/1:43,0:23:0:0,0,0	0/0:22,0:22:45.14:0,45,1115	1/1:20,10:32:27.56:515,28,0	1/1:17,9:27:18.02:308,18,0	0/0:22,0:22:13.60:0,14,280	1/1:13,6:19:12.04:246,12,0	0/0:21,0:24:30.10:0,30,677	0/0:17,0:18:18.06:0,18,487	0/0:22,0:23:45.62:0,46,1217	0/0:10,0:22:33.06:0,33,787	1/1:7,7:16:18.06:325,18,0	1/1:17,7:24:30.10:614,30,0	0/0:21,0:23:35.78:0,36,1046	1/1:15,3:18:2.80:61,3,0	1/1:11,3:15:15.05:288,15,0	0/0:19,0:16:20.09:0,20,401	0/0:28,0:28:30.06:0,30,581	0/0:27,0:27:60.17:0,60,1657	1/1:17,5:22:9.03:161,9,0	1/1:32,3:35:6.02:123,6,0	1/1:8,5:13:2.78:61,3,0	1/1:11,8:20:19.88:374,20,0	0/0:20,0:21:27.98:0,28,612	0/0:30,0:33:57.15:0,57,1426	0/0:13,0:14:36.12:0,36,1031
chr10	102481312	.	T	TA	16917.87	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=15.694;DP=661;FS=5.978;HRun=2;HaplotypeScore=129.5279;InbreedingCoeff=0.9779;MQ=91.59;MQ0=0;MQRankSum=-7.941;QD=35.32;ReadPosRankSum=3.457;VQSLOD=4.0530;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,42:46:99:1557,111,0	0/0:6,0:6:18.06:0,18,223	0/0:23,0:23:56.88:0,57,651	0/0:35,0:36:95.71:0,96,1066	0/0:20,0:20:57.18:0,57,706	1/1:1,19:20:51.17:726,51,0	1/1:2,25:26:63.21:890,63,0	1/1:2,20:22:66.15:873,66,0	1/1:2,25:27:72.24:1029,72,0	0/0:22,0:22:66.20:0,66,808	0/0:12,0:12:33.10:0,33,409	0/0:23,0:23:60.19:0,60,744	0/0:22,0:22:60.17:0,60,729	1/1:2,21:22:60.20:839,60,0	1/1:1,37:37:99:1496,105,0	0/0:17,1:18:4.95:0,5,515	1/1:2,33:35:81.22:1133,81,0	1/1:2,22:24:57.19:820,57,0	1/1:6,15:20:45.15:645,45,0	1/1:2,13:15:39.05:491,39,0	1/1:1,27:28:69.08:965,69,0	1/1:1,12:13:36.59:500,37,0	1/1:0,25:25:69.23:967,69,0	1/1:2,33:35:84.28:1208,84,0	1/1:1,19:20:51.12:687,51,0	1/1:5,20:25:23:782,23,0	1/1:2,24:26:69.23:973,69,0	1/1:1,8:9:24.08:339,24,0
chr10	102481571	.	GAGGC	G	1537.53	PASS	AB=0.792;AC=18;AF=0.450;AN=40;BaseQRankSum=-0.234;DP=357;FS=70.373;HRun=0;HaplotypeScore=38.7775;InbreedingCoeff=-0.1139;MQ=19.98;MQ0=146;MQRankSum=-2.570;QD=6.71;ReadPosRankSum=0.710;VQSLOD=-0.4973;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,2:6:43.84:44,0,58	./.	./.	./.	./.	./.	0/1:31,16:19:6.48:500,0,6	1/1:2,1:1:3.01:52,3,0	0/1:20,12:15:67.61:187,0,68	0/0:6,0:2:3:0,3,42	./.	0/0:21,0:10:27.09:0,27,380	0/0:14,0:3:9.03:0,9,125	0/1:13,6:8:23.89:231,0,24	0/1:21,1:6:37.35:37,0,153	0/0:15,0:8:15.05:0,15,210	0/1:21,2:7:99:119,0,108	0/1:12,4:6:71.91:93,0,72	1/1:11,3:3:9.03:157,9,0	0/1:1,2:2:0:0,0,0	1/1:14,7:10:1.64:50,2,0	./.	./.	0/0:30,8:20:19.58:0,20,223	0/1:7,1:2:35.82:46,0,36	0/0:13,0:1:3.01:0,3,42	0/1:3,3:4:35.87:46,0,36	1/1:0,3:3:6.02:105,6,0
chr10	102481639	.	GGGGC	G	2234.15	PASS	AB=0.624;AC=22;AF=0.550;AN=40;BaseQRankSum=6.498;DP=309;FS=3.567;HRun=0;HaplotypeScore=46.2703;InbreedingCoeff=0.5753;MQ=44.50;MQ0=59;MQRankSum=-6.805;QD=20.50;ReadPosRankSum=-0.352;VQSLOD=2.8614;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:2,0:2:3.01:0,3,86	0/0:37,0:13:33.05:0,33,595	0/0:28,1:7:15.18:0,15,267	./.	1/1:1,3:3:6.02:112,6,0	1/1:1,3:3:6.02:124,6,0	./.	1/1:1,2:1:3.01:61,3,0	0/0:14,0:10:18.06:0,18,444	0/0:5,0:4:3.01:0,3,68	0/0:21,0:19:57.20:0,57,1494	0/0:15,0:14:42.14:0,42,1162	0/1:11,7:13:11.51:495,0,12	1/1:3,1:4:9.03:187,9,0	0/0:15,0:15:42.14:0,42,1108	1/1:1,11:11:9.03:178,9,0	1/1:3,0:3:9.03:186,9,0	1/1:16,5:4:12.04:212,12,0	./.	./.	./.	./.	0/1:2,17:19:57.13:234,0,57	./.	1/1:7,1:3:3.01:53,3,0	1/1:0,7:7:18.06:361,18,0	1/1:2,4:4:9.03:187,9,0
chr10	102481640	.	GGGCAGAGGCAGAGGGAGA	G	1121.90	PASS	AB=1.000;AC=26;AF=0.565;AN=46;BaseQRankSum=6.508;DP=300;FS=0.728;HRun=0;HaplotypeScore=87.6772;InbreedingCoeff=0.5721;MQ=45.09;MQ0=56;MQRankSum=-4.881;QD=9.20;ReadPosRankSum=-2.966;VQSLOD=1.2092;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:3,0:3:3.01:0,3,52	0/0:38,0:13:32.85:0,33,501	0/0:29,0:7:17.84:0,18,285	0/0:10,0:9:3.01:0,3,33	1/1:4,0:3:6.02:75,6,0	1/1:4,0:3:6.02:76,6,0	1/1:1,5:5:15.05:245,15,0	1/1:3,0:1:3.01:37,3,0	0/0:13,0:9:12.04:0,12,229	0/0:5,0:4:3.01:0,3,53	0/0:21,0:19:54.14:0,54,1696	0/0:14,0:14:36.11:0,36,1275	1/1:17,0:13:20.71:193,21,0	1/1:4,0:4:8.76:74,9,0	0/0:14,0:14:42.14:0,42,1506	0/1:12,0:11:12.69:13,0,33	1/1:3,0:3:9.02:104,9,0	1/1:19,0:4:12:127,12,0	./.	1/1:9,0:5:3.01:36,3,0	./.	./.	1/1:19,0:19:18.85:151,19,0	./.	1/1:8,0:3:2.94:18,3,0	0/1:7,0:7:72.28:72,0,90	1/1:6,0:4:8.91:72,9,0
chr10	102481643	.	C	CAG	1424.01	PASS	AB=0.962;AC=21;AF=0.500;AN=42;BaseQRankSum=5.642;DP=325;FS=4.926;HRun=0;HaplotypeScore=63.3174;InbreedingCoeff=0.5295;MQ=44.85;MQ0=53;MQRankSum=-5.194;QD=12.07;ReadPosRankSum=-2.191;VQSLOD=2.5016;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:3,0:3:3.01:0,3,42	0/0:37,0:15:33.07:0,33,418	0/0:30,0:9:9.76:0,10,171	./.	1/1:4,0:3:6.02:94,6,0	1/1:5,0:4:9.03:126,9,0	./.	1/1:5,0:3:3.01:42,3,0	0/0:13,0:9:16.30:0,16,213	0/0:4,0:3:3.01:0,3,42	0/0:23,0:21:54.18:0,54,754	0/0:16,0:16:42.14:0,42,588	0/1:20,3:18:8.86:410,0,9	1/1:6,2:7:9.03:136,9,0	0/0:15,0:15:42.14:0,42,588	0/0:13,0:12:5.60:0,6,19	1/1:1,3:4:9.03:135,9,0	1/1:19,0:4:12.02:146,12,0	./.	./.	./.	./.	0/1:22,0:22:26.48:171,0,26	0/1:5,0:3:0:0,0,0	1/1:9,0:4:1.65:51,2,0	1/1:7,0:7:4.18:135,4,0	1/1:7,0:5:9.03:129,9,0
chr10	102481820	.	GCA	G	2455.78	PASS	AB=0.887;AC=21;AF=0.375;AN=56;BaseQRankSum=2.669;DP=703;FS=3.244;HRun=0;HaplotypeScore=134.6228;InbreedingCoeff=0.3352;MQ=54.29;MQ0=15;MQRankSum=-0.458;QD=7.04;ReadPosRankSum=1.055;VQSLOD=3.1728;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,17:37:47.80:501,48,0	0/0:11,0:11:18.04:0,18,249	0/0:37,0:9:0:0,0,0	0/0:62,0:16:5.99:0,6,67	0/1:16,3:18:9.79:10,0,294	0/0:13,0:13:2.99:0,3,25	0/0:28,0:28:4.23:0,4,59	1/1:18,5:24:23.55:202,24,0	0/0:29,0:28:8.50:0,9,62	0/1:21,3:24:37.49:37,0,328	0/1:12,1:13:18.74:19,0,168	0/1:19,2:22:99:134,0,384	0/1:27,3:30:10.46:10,0,686	0/0:28,0:32:2.55:0,3,20	0/0:16,0:19:16.52:0,17,159	0/0:19,1:20:17.38:0,17,674	0/0:11,0:30:50.99:0,51,446	0/0:7,0:13:15.02:0,15,160	1/1:11,5:17:17.45:147,17,0	1/1:13,6:20:4.94:229,5,0	1/1:19,21:42:38.90:419,39,0	0/0:23,0:21:2.46:0,2,44	0/0:13,0:13:2.52:0,3,27	0/1:25,0:29:0.22:0,0,0	0/0:22,0:21:5.02:0,5,47	0/1:20,10:31:92.50:340,0,93	1/1:9,9:17:24.07:270,24,0	1/1:18,4:22:30.04:314,30,0
chr10	102482833	.	G	GC	1984.51	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-7.953;DP=308;FS=8.767;HRun=8;HaplotypeScore=34.8696;InbreedingCoeff=0.9294;MQ=93.26;MQ0=0;MQRankSum=-5.206;QD=23.63;ReadPosRankSum=0.111;VQSLOD=3.2926;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:60.18:692,60,0	0/0:5,0:5:12.01:0,12,110	0/0:12,0:12:29.86:0,30,248	0/0:19,0:19:33.45:0,33,299	0/0:8,0:8:14.36:0,14,182	0/0:8,0:8:24.01:0,24,220	0/0:17,0:17:45.02:0,45,410	1/1:2,5:7:12.01:127,12,0	0/0:14,0:14:39:0,39,352	0/0:14,0:14:42.02:0,42,384	0/0:2,0:2:6:0,6,55	0/0:9,0:9:27.01:0,27,247	0/0:7,0:7:21.01:0,21,192	0/0:8,0:8:24.01:0,24,220	0/0:8,0:8:21:0,21,187	0/0:8,0:8:21.01:0,21,192	0/0:23,0:23:69.01:0,69,625	0/0:12,0:12:30.01:0,30,274	1/1:2,6:9:20.85:207,21,0	1/1:0,7:7:18.05:208,18,0	1/1:3,24:26:54.16:623,54,0	0/0:4,0:4:12.01:0,12,110	0/0:9,0:9:24:0,24,214	0/0:16,0:16:45.02:0,45,412	0/0:10,0:10:27.01:0,27,247	0/0:9,0:9:24.01:0,24,219	1/1:0,11:11:27.08:312,27,0	0/0:2,0:2:6:0,6,55
chr10	102484688	.	T	TAA	8090.48	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=11.966;DP=446;FS=15.306;HRun=7;HaplotypeScore=126.1559;InbreedingCoeff=0.9706;MQ=72.69;MQ0=2;MQRankSum=-11.783;QD=26.53;ReadPosRankSum=-5.988;VQSLOD=1.5506;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:11,13:24:53.10:746,53,0	0/0:3,0:3:9.03:0,9,105	0/0:23,0:18:32.89:0,33,407	0/0:19,0:15:36.08:0,36,343	0/0:19,0:19:42.10:0,42,486	1/1:9,10:19:47.86:634,48,0	1/1:14,5:19:47.81:623,48,0	1/1:15,6:21:42.09:576,42,0	1/1:11,3:14:22.31:283,22,0	0/0:21,0:21:50.49:0,50,562	0/0:10,0:10:15.01:0,15,174	0/0:14,0:14:33.08:0,33,384	0/0:19,0:19:57.17:0,57,661	1/1:7,10:17:39.97:525,40,0	1/1:9,3:12:29.68:385,30,0	0/0:13,0:13:36.11:0,36,418	1/1:4,23:26:36.09:483,36,0	1/1:5,7:12:30.09:417,30,0	1/1:11,3:14:33.04:430,33,0	1/1:11,6:17:39.13:535,39,0	1/1:14,1:16:18.53:239,19,0	1/1:5,6:11:24.84:290,25,0	1/1:8,1:9:17.95:221,18,0	1/1:12,9:21:36.32:515,36,0	1/1:5,5:10:27.09:385,27,0	1/1:12,0:16:32.11:197,32,0	1/1:18,3:21:44.84:564,45,0	1/1:3,0:5:6.84:44,7,0
chr10	102484704	.	G	GGA	6649.63	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=10.425;DP=407;FS=2.664;HRun=0;HaplotypeScore=94.0720;InbreedingCoeff=0.9657;MQ=76.27;MQ0=2;MQRankSum=-10.387;QD=24.45;ReadPosRankSum=-2.190;VQSLOD=4.5250;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:26:30.63:420,31,0	0/0:5,0:5:12.03:0,12,154	0/0:18,0:14:22.42:0,22,366	0/0:25,0:21:51.39:0,51,554	0/0:19,0:19:47.12:0,47,591	1/1:0,13:15:42.07:657,42,0	1/1:1,21:23:27.17:447,27,0	1/1:0,0:13:26.94:256,27,0	1/1:0,7:8:21.07:373,21,0	0/0:18,0:18:54.15:0,54,732	0/0:11,0:11:27.91:0,28,320	0/0:13,0:13:39.12:0,39,538	0/0:16,0:16:48.14:0,48,663	1/1:2,14:17:35.30:580,35,0	1/1:2,8:10:18.43:272,18,0	0/0:10,0:10:30.09:0,30,409	1/1:8,13:20:45.91:629,46,0	1/1:0,8:8:18.06:307,18,0	1/1:2,0:14:34.94:319,35,0	1/1:0,3:12:14.20:141,14,0	1/1:2,0:18:11.78:90,12,0	1/1:1,9:10:15.05:255,15,0	1/1:0,7:9:9.03:155,9,0	1/1:2,16:18:23.75:409,24,0	1/1:1,10:11:24.08:378,24,0	1/1:1,0:18:47.95:523,48,0	1/1:1,0:14:24.08:306,24,0	1/1:0,0:7:11.95:133,12,0
chr10	102485389	.	T	TCA	23488.53	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-18.498;DP=1132;FS=3.570;HRun=0;HaplotypeScore=138.9962;InbreedingCoeff=0.9972;MQ=58.50;MQ0=14;MQRankSum=0.054;QD=29.92;ReadPosRankSum=3.948;VQSLOD=6.8561;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,44:54:87.51:1428,88,0	0/0:14,0:14:30.10:0,30,378	0/0:42,0:23:38.66:0,39,419	0/0:41,0:29:60.15:0,60,707	0/0:42,0:41:99:0,102,1258	1/1:5,19:24:36.12:598,36,0	1/1:4,32:37:75.25:1222,75,0	1/1:19,31:50:20.58:1310,21,0	1/1:9,40:49:31.64:1371,32,0	0/0:67,0:67:99:0,178,2202	0/0:21,0:21:42.13:0,42,530	0/0:44,0:44:78.82:0,79,1143	0/0:42,0:41:99:0,105,1324	1/1:8,41:47:61.78:1556,62,0	1/1:7,52:61:99:2137,129,0	0/0:33,0:32:84.23:0,84,1019	1/1:10,33:43:31.58:1061,32,0	1/1:7,31:39:63:1138,63,0	1/1:13,15:25:45.15:707,45,0	1/1:5,29:36:54.18:890,54,0	1/1:32,38:69:99:2321,137,0	1/1:4,34:39:77.96:1296,78,0	1/1:4,24:27:42.14:698,42,0	1/1:9,45:54:95.51:1686,96,0	1/1:5,24:30:51.17:847,51,0	1/1:6,41:47:50.70:1912,51,0	1/1:4,20:25:45.15:735,45,0	1/1:3,13:17:16.28:575,16,0
chr10	102485561	.	TCACA	T	6240.38	PASS	AB=0.860;AC=12;AF=0.214;AN=56;BaseQRankSum=14.959;DP=1161;FS=0.000;HRun=0;HaplotypeScore=232.9498;InbreedingCoeff=0.8050;MQ=56.08;MQ0=20;MQRankSum=-6.391;QD=20.39;ReadPosRankSum=-7.384;VQSLOD=2.3558;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:26,36:62:94.38:2420,94,0	0/0:13,0:13:36.12:0,36,939	0/1:42,0:10:6.22:6,0,211	0/0:39,0:19:19.89:0,20,335	0/0:33,0:32:93.25:0,93,2231	0/0:24,0:24:63.22:0,63,1552	0/0:47,0:47:99:0,135,3014	1/1:16,26:33:46.52:1010,47,0	0/0:49,0:49:99:0,135,3229	0/0:60,0:60:99:0,162,3900	0/0:25,0:25:60.19:0,60,1451	0/0:51,0:51:99:0,132,3029	0/0:51,0:51:99:0,138,3154	0/0:54,0:54:99:0,150,3685	0/0:62,0:62:99:0,172,4175	0/0:53,0:53:99:0,160,3831	0/0:49,0:48:99:0,133,3207	0/0:37,0:37:99:0,101,2307	0/1:11,7:10:37.13:269,0,37	1/1:10,13:23:46.63:621,47,0	1/1:64,30:87:72.42:1028,72,0	0/0:30,0:30:78.27:0,78,1901	0/0:33,0:33:96.31:0,96,2355	0/0:65,0:64:99:0,155,3851	0/0:36,0:36:99:0,102,2512	0/0:33,0:32:87.30:0,87,2165	1/1:6,19:25:68.87:886,69,0	0/0:11,0:11:30.09:0,30,727
chr10	102485587	.	T	TCA	2880.73	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=2.359;DP=1165;FS=2.643;HRun=0;HaplotypeScore=216.0885;InbreedingCoeff=0.8791;MQ=52.15;MQ0=30;MQRankSum=-6.558;QD=11.81;ReadPosRankSum=-5.048;VQSLOD=2.5984;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:67,0:67:99:0,138,1806	0/0:13,0:13:30.10:0,30,377	0/0:31,0:2:5.61:0,6,48	0/0:34,0:6:3.01:0,3,38	0/0:38,0:36:99:0,99,1255	0/0:32,0:32:78.25:0,78,989	0/0:40,0:39:67.41:0,67,832	1/1:41,8:37:21.94:797,22,0	0/0:46,0:45:99:0,99,1207	0/0:63,0:62:99:0,149,1902	0/0:21,0:21:57.18:0,57,722	0/0:39,0:39:90.29:0,90,1143	0/0:47,0:47:99:0,120,1425	0/0:49,0:49:96.17:0,96,1156	0/0:61,0:61:99:0,135,1663	0/0:50,0:49:99:0,117,1430	0/0:52,0:51:99:0,114,1477	0/0:39,0:39:67.04:0,67,1015	1/1:12,9:14:27.03:371,27,0	1/1:9,16:23:30.60:486,31,0	1/1:29,81:105:42.45:708,42,0	0/0:32,0:32:87.27:0,87,1089	0/0:35,0:34:69.21:0,69,863	0/0:66,0:65:96.03:0,96,1623	0/0:35,0:35:78.24:0,78,979	0/0:30,0:29:75.20:0,75,912	1/1:8,18:26:42.14:691,42,0	0/1:11,0:11:0.24:0,0,241
chr10	102485675	.	TCA	T	11567.15	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.668;DP=1140;FS=4.172;HRun=0;HaplotypeScore=179.9342;InbreedingCoeff=0.9996;MQ=54.97;MQ0=36;MQRankSum=-0.546;QD=27.74;ReadPosRankSum=4.088;VQSLOD=5.9832;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:72.01:0,72,1451	0/0:11,0:11:33.11:0,33,571	0/0:50,0:9:27.05:0,27,392	0/0:58,0:12:26.79:0,27,261	0/0:36,0:36:99:0,105,1733	1/1:3,18:22:47.36:528,47,0	1/1:6,32:38:60.96:971,61,0	0/0:51,0:45:99:0,105,1776	1/1:11,45:56:99:1313,99,0	0/0:62,0:60:99:0,172,2852	0/0:18,0:18:48.16:0,48,825	0/0:45,0:45:99:0,135,2315	0/0:49,0:48:99:0,135,2165	1/1:6,44:50:99:1575,123,0	1/1:3,38:40:93.25:1202,93,0	0/0:41,0:41:99:0,114,1931	1/1:3,21:24:45.86:607,46,0	1/1:7,35:42:63.75:1144,64,0	0/0:22,0:11:30.10:0,30,495	0/0:25,0:25:66.23:0,66,1136	0/0:125,0:121:99:0,270,4295	1/1:4,36:39:84.24:1118,84,0	1/1:0,20:20:48.15:639,48,0	1/1:17,35:52:99:1596,126,0	1/1:1,29:30:69.14:875,69,0	0/0:49,0:49:99:0,141,2316	0/0:22,0:22:66.18:0,66,1105	0/0:13,0:13:36.11:0,36,589
chr10	102485752	.	TTC	T	1858.03	PASS	AB=0.990;AC=13;AF=0.232;AN=56;BaseQRankSum=14.534;DP=843;FS=0.670;HRun=0;HaplotypeScore=204.0362;InbreedingCoeff=0.0131;MQ=48.36;MQ0=14;MQRankSum=-6.132;QD=5.53;ReadPosRankSum=3.016;VQSLOD=3.1985;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:57.90:0,58,1059	0/0:13,0:13:39.08:0,39,648	0/1:46,0:12:1.76:2,0,462	0/0:44,0:13:35.94:0,36,527	0/0:29,0:29:84.07:0,84,1509	0/1:23,0:23:0.72:219,0,1	0/1:24,0:23:45.63:169,0,46	0/0:35,0:33:82.08:0,82,1634	0/1:37,1:38:43.36:341,0,43	0/0:36,0:35:99:0,105,1890	0/0:24,0:24:67.46:0,67,1269	0/0:38,0:38:96.72:0,97,2055	0/0:42,0:41:99:0,117,2158	0/1:40,0:39:99:216,0,107	0/1:32,0:31:27.65:233,0,28	0/0:46,0:46:99:0,135,2553	0/1:18,0:18:47.35:135,0,47	0/1:18,0:18:7.31:150,0,7	0/0:17,0:13:36.11:0,36,666	0/0:27,0:25:23.61:0,24,745	0/0:63,0:60:99:0,142,2475	1/1:31,2:32:20.60:221,21,0	0/1:21,0:21:14.91:115,0,15	0/1:19,1:19:32.69:116,0,33	0/1:22,1:23:99:100,0,104	0/0:36,0:35:70.62:0,71,1676	0/0:15,0:14:40.37:0,40,715	0/0:11,0:11:14.77:0,15,549
chr10	102485753	.	TCA	T	6272.10	PASS	AB=0.813;AC=22;AF=0.393;AN=56;BaseQRankSum=12.592;DP=848;FS=3.201;HRun=0;HaplotypeScore=193.2383;InbreedingCoeff=0.8397;MQ=48.15;MQ0=14;MQRankSum=-6.297;QD=18.72;ReadPosRankSum=-1.313;VQSLOD=4.6005;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:59.19:0,59,947	0/0:13,0:13:30.10:0,30,508	0/1:44,1:12:7.63:8,0,411	0/0:44,0:14:30.06:0,30,479	0/0:28,0:28:78.07:0,78,1270	1/1:5,18:23:53.17:629,53,0	1/1:9,16:24:25.81:561,26,0	0/0:38,0:36:81.70:0,82,1277	1/1:10,28:38:74.89:908,75,0	0/0:37,0:36:96.31:0,96,1578	0/0:24,0:24:66.22:0,66,1105	0/0:38,0:38:91.76:0,92,1624	0/0:42,0:41:99:0,108,1828	1/1:18,22:39:77.05:852,77,0	1/1:5,25:30:40.01:692,40,0	0/0:46,0:46:99:0,126,2127	1/1:9,9:18:11.94:341,12,0	1/1:8,10:18:5.88:477,6,0	0/0:17,0:13:33.08:0,33,473	0/0:29,0:27:44.54:0,45,656	0/0:64,0:60:99:0,114,1851	1/1:11,22:32:62.09:692,62,0	1/1:5,16:21:36.07:440,36,0	1/1:11,10:20:27.77:339,28,0	0/1:10,12:22:43.73:335,0,44	0/0:35,0:34:81.09:0,81,1374	0/0:16,0:15:39.09:0,39,616	0/0:11,0:11:30.96:0,31,484
chr10	102485762	.	CAT	C	2569.48	PASS	AB=0.981;AC=20;AF=0.357;AN=56;BaseQRankSum=15.164;DP=848;FS=2.179;HRun=0;HaplotypeScore=216.7653;InbreedingCoeff=0.6972;MQ=47.76;MQ0=11;MQRankSum=-6.335;QD=7.49;ReadPosRankSum=-2.667;VQSLOD=3.1530;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:31:18.59:0,19,908	0/0:11,0:11:33.10:0,33,590	0/0:45,0:15:30.82:0,31,549	0/0:44,0:13:31.45:0,31,531	0/0:25,0:25:72.08:0,72,1328	1/1:23,0:23:20.35:271,20,0	1/1:29,0:28:18.32:240,18,0	0/1:44,0:41:66.86:67,0,1160	1/1:41,0:41:32.65:395,33,0	0/0:36,0:35:90.79:0,91,1694	0/0:25,0:25:72.22:0,72,1294	0/0:35,0:35:97.84:0,98,1698	0/0:42,0:41:99:0,116,2001	1/1:31,3:33:70.21:400,70,0	0/1:34,0:34:8.90:253,0,9	0/0:46,0:46:99:0,124,2394	1/1:20,0:20:15.47:201,15,0	1/1:19,1:20:29.30:258,29,0	0/0:13,0:11:24.02:0,24,365	0/0:27,0:25:19.33:0,19,546	0/0:62,0:60:63:0,63,1825	1/1:34,1:35:29.87:285,30,0	1/1:20,1:21:10.77:145,11,0	0/1:22,2:23:23.45:129,0,23	0/1:18,0:18:6.14:134,0,6	0/0:37,0:35:32.24:0,32,1363	0/0:15,0:14:22.64:0,23,620	0/0:10,0:10:11.71:0,12,482
chr10	102485771	.	T	TCACA	9002.52	PASS	AB=0.744;AC=37;AF=0.661;AN=56;BaseQRankSum=7.781;DP=836;FS=0.000;HRun=0;HaplotypeScore=229.7790;InbreedingCoeff=0.7984;MQ=49.07;MQ0=11;MQRankSum=-8.503;QD=16.80;ReadPosRankSum=-7.755;VQSLOD=2.0693;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:7.43:73,7,0	0/0:9,0:10:12.03:0,12,173	0/0:43,0:12:5.97:0,6,69	0/0:41,0:13:2.65:0,3,26	0/0:24,0:25:45.06:0,45,671	1/1:12,11:24:13.30:978,13,0	0/1:19,10:28:4.52:841,0,5	1/1:38,0:36:31.36:198,31,0	1/1:31,12:45:59.67:1201,60,0	0/0:35,0:36:51.16:0,51,782	0/0:27,0:28:54.15:0,54,789	0/0:29,0:30:60.18:0,60,924	0/0:42,0:43:87.29:0,87,1357	1/1:21,9:30:41.54:797,42,0	1/1:17,19:36:26.99:1484,27,0	0/0:41,0:43:77.98:0,78,1126	1/1:20,0:20:10.54:130,11,0	1/1:17,0:18:11.54:143,12,0	1/1:13,0:9:7.84:108,8,0	1/1:23,0:27:34.61:447,35,0	1/1:59,0:58:25.99:254,26,0	1/1:29,8:38:26.26:476,26,0	1/1:15,4:21:23.55:409,24,0	1/1:11,11:21:27.08:597,27,0	1/1:14,4:20:7.75:377,8,0	1/1:20,1:33:6.45:344,6,0	1/1:17,0:16:6.89:71,7,0	1/1:6,0:8:5.98:73,6,0
chr10	102486485	.	TAGAAG	T	2532.96	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.970;DP=678;FS=2.804;HRun=0;HaplotypeScore=116.8633;InbreedingCoeff=0.9146;MQ=57.81;MQ0=4;MQRankSum=-0.835;QD=52.77;ReadPosRankSum=-0.752;VQSLOD=4.0159;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,3068	0/0:9,0:9:27.09:0,27,848	0/0:29,0:15:42.14:0,42,1100	0/0:34,0:18:17.88:0,18,1317	0/0:16,0:16:48.16:0,48,1502	0/0:23,0:23:66.23:0,66,2071	0/0:32,0:32:90.31:0,90,2728	0/0:29,0:29:75.24:0,75,2273	0/0:25,0:25:75.24:0,75,2266	0/0:28,0:28:75.26:0,75,2248	0/0:22,0:22:66.23:0,66,2059	0/0:16,0:16:42.14:0,42,1333	0/0:25,0:25:75.26:0,75,2372	0/0:18,0:18:54.19:0,54,1713	0/0:32,0:32:96.33:0,96,2975	0/0:23,0:23:66.21:0,66,2024	0/0:18,0:18:54.18:0,54,1653	0/0:35,0:35:96.33:0,96,3034	0/0:20,0:20:54.17:0,54,1608	0/0:24,0:24:72.25:0,72,2195	0/0:21,0:21:60.21:0,60,1904	0/0:21,0:21:63.22:0,63,1989	0/0:27,0:27:78.25:0,78,2359	0/0:24,0:24:72.25:0,72,2236	0/0:22,0:22:66.23:0,66,2094	1/1:1,34:35:4.12:1926,4,0	0/0:23,0:21:69.24:0,69,2175	1/1:2,11:13:33.11:716,33,0
chr10	102486883	.	C	CCGGCTCAG	11839.78	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-8.813;DP=618;FS=0.860;HRun=0;HaplotypeScore=184.5716;InbreedingCoeff=0.9825;MQ=83.44;MQ0=0;MQRankSum=-12.830;QD=63.31;ReadPosRankSum=-3.807;VQSLOD=4.1250;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,18:43:60.21:2417,60,0	0/0:7,0:7:18.06:0,18,449	0/0:19,0:19:36.05:0,36,669	0/0:25,0:25:47.74:0,48,1095	0/0:16,0:16:42.14:0,42,1127	0/0:19,0:19:48.16:0,48,1231	0/0:30,0:30:78.21:0,78,1851	1/1:20,8:29:51.18:1881,51,0	0/0:18,0:18:45.15:0,45,1206	0/0:36,0:36:96.33:0,96,2520	0/0:25,0:25:72.25:0,72,1876	0/0:25,0:25:66.21:0,66,1614	0/0:26,0:26:72.24:0,72,1851	0/0:17,0:17:48.16:0,48,1285	0/0:23,0:23:57.20:0,57,1511	0/0:13,0:13:39.11:0,39,935	0/0:29,0:29:78.27:0,78,2093	0/0:21,0:21:57.20:0,57,1519	1/1:14,10:26:48.14:1722,48,0	1/1:5,10:15:21.07:893,21,0	1/1:15,7:26:7.74:382,8,0	0/0:22,0:22:51.16:0,51,1262	0/0:11,0:11:30.09:0,30,722	0/0:26,0:25:72.20:0,72,1732	0/0:23,0:23:51.18:0,51,1368	1/1:6,10:17:39.11:1426,39,0	1/1:8,14:24:60.18:2478,60,0	1/1:2,5:7:15.05:641,15,0
chr10	102487094	.	C	CCT	6603.20	PASS	AB=0.979;AC=17;AF=0.304;AN=56;BaseQRankSum=-10.522;DP=648;FS=4.292;HRun=0;HaplotypeScore=81.7818;InbreedingCoeff=0.8956;MQ=76.99;MQ0=1;MQRankSum=0.138;QD=26.00;ReadPosRankSum=-0.604;VQSLOD=5.2598;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,26:38:25.55:719,26,0	0/0:7,0:7:18.05:0,18,215	0/0:35,0:27:43.76:0,44,472	0/1:45,0:30:6.70:7,0,193	0/0:20,0:20:57.17:0,57,693	0/0:26,0:26:69.22:0,69,854	0/0:22,0:22:56.85:0,57,680	1/1:11,24:35:77.85:1210,78,0	0/0:16,0:16:39.11:0,39,471	0/0:16,0:16:42.12:0,42,500	0/0:23,0:23:60.19:0,60,743	0/0:10,0:10:30.09:0,30,372	0/0:21,0:21:54.16:0,54,657	0/0:20,0:21:63.03:0,63,750	0/0:13,0:13:36.11:0,36,446	0/0:28,0:28:72.23:0,72,892	0/0:43,0:43:99:0,120,1459	0/0:18,0:18:45.10:0,45,538	1/1:10,5:15:2.37:492,2,0	1/1:3,17:20:45.10:694,45,0	1/1:4,13:17:39.13:640,39,0	0/0:18,0:18:45.13:0,45,546	0/0:20,0:20:54.12:0,54,622	0/0:15,0:15:33.09:0,33,396	0/0:22,0:22:51.16:0,51,631	1/1:5,22:27:27.01:1036,27,0	1/1:8,22:30:66.22:1068,66,0	1/1:6,17:23:45.15:738,45,0
chr10	102487211	.	C	CT	10607.72	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-17.321;DP=618;FS=2.150;HRun=0;HaplotypeScore=66.0509;InbreedingCoeff=0.9918;MQ=70.77;MQ0=0;MQRankSum=0.349;QD=44.76;ReadPosRankSum=-1.953;VQSLOD=4.4731;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,41:42:99:1870,117,0	0/0:12,0:12:36.12:0,36,501	0/0:10,0:9:20.60:0,21,212	0/0:6,0:7:10.36:0,10,109	0/0:23,0:23:63.21:0,63,880	0/0:29,0:29:87.28:0,87,1196	0/0:19,0:19:57.19:0,57,795	1/1:1,35:36:99:1556,102,0	0/0:25,0:25:75.25:0,75,1042	0/0:18,0:18:54.18:0,54,736	0/0:18,0:18:54.17:0,54,727	0/0:21,0:21:63.21:0,63,870	0/0:20,0:20:60.20:0,60,826	0/0:24,0:24:69.23:0,69,962	0/0:14,0:14:42.14:0,42,587	0/0:24,0:24:66.22:0,66,918	1/1:0,35:35:99:1582,99,0	1/1:0,31:31:90.31:1439,90,0	1/1:1,24:25:75.23:1151,75,0	1/1:0,16:16:48.16:767,48,0	1/1:1,21:22:57.19:911,57,0	0/0:22,0:22:63.19:0,63,877	0/0:20,0:20:60.19:0,60,820	0/0:17,0:17:45.15:0,45,626	0/0:26,0:26:75.14:0,75,1022	0/0:20,0:20:57.15:0,57,759	1/1:2,27:30:84.29:1331,84,0	0/0:12,0:12:36.12:0,36,500
chr10	102487803	.	CTCT	C	7344.29	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.678;DP=575;FS=4.219;HRun=0;HaplotypeScore=135.6143;InbreedingCoeff=0.9971;MQ=82.01;MQ0=0;MQRankSum=-9.019;QD=43.72;ReadPosRankSum=1.337;VQSLOD=6.1046;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,148,3399	0/0:11,0:11:33.11:0,33,781	0/0:12,0:13:39.09:0,39,809	0/0:25,0:25:69.20:0,69,1390	0/0:24,0:24:72.23:0,72,1626	1/1:1,15:16:48.16:842,48,0	1/1:2,15:17:33.11:550,33,0	0/0:24,0:24:72.24:0,72,1634	1/1:0,30:30:84.29:1465,84,0	0/0:23,0:23:69.24:0,69,1634	0/0:15,0:15:45.15:0,45,1064	0/0:15,0:15:45.15:0,45,1061	1/1:0,11:11:33.11:582,33,0	1/1:2,15:17:39.13:687,39,0	1/1:2,19:21:63.19:1055,63,0	0/0:15,0:14:45.15:0,45,1009	0/0:34,0:34:96.33:0,96,2266	0/0:21,0:21:60.16:0,60,1315	0/0:24,0:24:69.24:0,69,1581	0/0:21,0:21:63.20:0,63,1415	0/0:25,0:25:63.22:0,63,1487	1/1:1,12:13:33.11:568,33,0	1/1:2,9:11:30.10:498,30,0	1/1:2,11:13:30.10:529,30,0	1/1:4,15:19:33.11:568,33,0	0/0:25,0:25:63.11:0,63,424	0/0:32,0:32:87.30:0,87,1981	0/0:6,0:6:14.72:0,15,117
chr10	102487805	.	CT	C	2417.05	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=17.612;DP=569;FS=7.984;HRun=2;HaplotypeScore=130.1000;InbreedingCoeff=0.9946;MQ=83.15;MQ0=0;MQRankSum=-8.494;QD=12.99;ReadPosRankSum=1.855;VQSLOD=2.4228;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,147,2188	0/0:11,0:11:33.11:0,33,495	0/0:14,0:14:24.17:0,24,494	0/0:25,0:25:72.08:0,72,924	0/0:24,0:24:66.19:0,66,931	1/1:16,0:16:42.84:183,43,0	1/1:15,0:15:28.16:125,28,0	0/0:24,0:24:72.22:0,72,1018	1/1:30,0:30:73.43:305,73,0	0/0:23,0:23:69.23:0,69,1016	0/0:15,0:15:45.15:0,45,673	0/0:15,0:15:45.15:0,45,674	1/1:11,0:11:29.46:121,29,0	1/1:15,0:15:34.82:143,35,0	1/1:19,0:19:50.89:209,51,0	0/0:15,0:14:45.15:0,45,665	0/0:37,0:37:99:0,105,1557	0/0:22,0:22:60.19:0,60,869	0/0:24,0:24:66.21:0,66,963	0/0:22,0:22:66.20:0,66,932	0/0:25,0:25:63.21:0,63,944	1/1:12,0:12:28.12:122,28,0	1/1:9,1:10:26.25:136,26,0	1/1:11,0:11:26.78:110,27,0	1/1:15,0:15:27.89:117,28,0	1/1:2,24:26:75.71:927,76,0	0/0:32,0:32:84.26:0,84,1202	1/1:1,5:6:12.04:148,12,0
chr10	102487866	.	TAAA	T	11650.30	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=14.914;DP=573;FS=3.077;HRun=11;HaplotypeScore=145.8530;InbreedingCoeff=0.9760;MQ=70.30;MQ0=0;MQRankSum=-8.904;QD=30.50;ReadPosRankSum=-0.179;VQSLOD=2.9196;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,37:43:87.24:1143,87,0	0/0:11,0:13:33.07:0,33,591	0/0:15,0:15:10.81:0,11,375	0/0:11,0:11:8.74:0,9,140	0/0:19,0:22:60.16:0,60,1060	1/1:1,19:20:45.10:565,45,0	1/1:5,20:25:51.09:646,51,0	1/1:2,15:17:45.12:591,45,0	1/1:4,22:26:66.20:853,66,0	0/0:23,0:23:60.21:0,60,1213	0/0:22,0:22:66.21:0,66,1251	0/0:16,0:19:42.12:0,42,794	1/1:0,17:17:48.15:624,48,0	1/1:1,11:12:30:355,30,0	1/1:2,16:18:36.01:429,36,0	0/0:15,0:15:42.14:0,42,829	0/0:2,0:28:68.76:0,69,552	0/0:2,0:22:59.79:0,60,479	1/1:1,12:14:34.65:470,35,0	1/1:2,21:23:60.05:726,60,0	1/1:1,19:20:48.06:592,48,0	1/1:1,16:17:45.09:563,45,0	1/1:1,17:18:45.09:563,45,0	1/1:1,20:21:48.15:631,48,0	1/1:1,16:17:42.05:509,42,0	1/1:1,33:34:99:1266,99,0	1/1:5,30:35:78.03:1005,78,0	1/1:2,3:5:9.01:118,9,0
chr10	102488133	.	TA	T	22284.50	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=13.379;DP=749;FS=0.313;HRun=1;HaplotypeScore=101.9053;InbreedingCoeff=0.9971;MQ=79.16;MQ0=0;MQRankSum=-6.096;QD=39.23;ReadPosRankSum=4.602;VQSLOD=4.8815;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,47:47:99:1887,135,0	0/0:10,0:10:30.10:0,30,478	0/0:11,0:11:14.75:0,15,455	0/0:25,0:25:69.21:0,69,1074	0/0:35,0:34:99:0,105,1629	1/1:0,22:22:60.20:839,60,0	1/1:0,20:20:54.18:755,54,0	1/1:0,37:37:99:1490,108,0	1/1:0,34:34:90.30:1258,90,0	0/0:31,0:31:93.32:0,93,1488	0/0:22,0:22:66.21:0,66,1025	0/0:22,0:22:66.22:0,66,1050	1/1:0,29:29:84.28:1174,84,0	1/1:0,32:32:90.30:1259,90,0	1/1:0,25:25:66.22:922,66,0	0/0:25,0:25:75.24:0,75,1176	1/1:0,30:30:84.28:1175,84,0	1/1:0,31:31:84.28:1174,84,0	1/1:0,25:25:75.23:1018,75,0	1/1:0,28:28:78.26:1091,78,0	1/1:0,34:34:96.32:1342,96,0	1/1:0,23:23:69.23:964,69,0	1/1:0,13:13:39.13:545,39,0	1/1:0,39:39:99:1426,102,0	1/1:0,26:26:72.24:1007,72,0	1/1:0,29:29:87.27:1198,87,0	1/1:0,27:27:75.25:1048,75,0	1/1:0,17:17:51.17:713,51,0
chr10	102488774	.	AAGG	A	1271.31	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.804;DP=621;FS=1.494;HRun=0;HaplotypeScore=97.2483;InbreedingCoeff=0.9911;MQ=79.85;MQ0=0;MQRankSum=-0.366;QD=45.40;ReadPosRankSum=-0.389;VQSLOD=5.3246;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,172,3695	0/0:9,0:9:27.09:0,27,602	0/0:28,0:28:66.21:0,66,1468	0/0:14,0:14:42.14:0,42,915	0/0:24,0:24:69.24:0,69,1570	0/0:22,0:22:66.23:0,66,1482	0/0:35,0:35:99:0,99,2109	0/0:21,0:21:57.19:0,57,1273	0/0:20,0:20:57.18:0,57,1252	0/0:21,0:21:35.21:0,35,1240	0/0:19,0:19:54.16:0,54,1124	0/0:22,0:22:63.22:0,63,1451	0/0:21,0:21:60.21:0,60,1348	0/0:19,0:19:57.20:0,57,1314	0/0:17,0:17:51.18:0,51,1176	0/0:13,0:13:36.11:0,36,781	0/0:36,0:36:99:0,102,2246	0/0:27,0:27:78.15:0,78,1543	0/0:20,0:20:54.12:0,54,1108	0/0:18,0:18:54.17:0,54,1201	0/0:20,0:20:57.18:0,57,1259	0/0:18,0:18:54.17:0,54,1192	0/0:14,0:14:42.14:0,42,968	0/0:35,0:35:96.30:0,96,2095	0/0:19,0:19:57.17:0,57,1260	1/1:0,23:23:69.22:1134,69,0	0/0:24,0:24:69.22:0,69,1504	1/1:0,5:5:15.05:256,15,0
chr10	102489167	.	AC	A	791.55	PASS	AB=0.870;AC=23;AF=0.411;AN=56;BaseQRankSum=-6.072;DP=363;FS=11.153;HRun=11;HaplotypeScore=70.5605;InbreedingCoeff=0.5387;MQ=88.04;MQ0=2;MQRankSum=-0.623;QD=3.82;ReadPosRankSum=-2.246;VQSLOD=-0.5409;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,14:36:2.35:133,0,2	0/0:4,0:5:11.90:0,12,96	0/1:22,0:17:1.18:1,0,92	0/1:21,0:17:5.38:5,0,98	1/1:8,2:10:2.03:23,2,0	0/0:9,0:9:24.33:0,24,105	0/0:22,0:22:48.21:0,48,199	1/1:6,3:10:10.94:73,11,0	0/0:16,0:16:26.68:0,27,112	0/1:6,1:7:18.57:19,0,25	0/1:5,0:5:0.03:0,0,0	0/0:14,0:14:24.02:0,24,233	0/0:7,0:7:18.75:0,19,78	0/0:13,0:14:32.54:0,33,139	0/0:4,0:5:10.83:0,11,46	0/1:5,2:7:9.62:10,0,101	0/0:8,0:16:11.60:0,12,88	0/1:16,5:21:30.38:30,0,158	1/1:4,5:10:17.01:128,17,0	1/1:5,6:13:11.32:73,11,0	1/1:2,7:10:16.04:110,16,0	0/0:9,0:9:18.75:0,19,78	0/0:14,0:14:29.46:0,29,121	0/0:11,0:11:13.46:0,13,57	0/0:14,0:14:23.31:0,23,94	1/1:5,11:16:23.92:197,24,0	1/1:1,9:10:14.90:117,15,0	1/1:1,5:8:10.06:61,10,0
chr10	102489172	.	C	CT	3694.50	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-1.585;DP=375;FS=7.959;HRun=0;HaplotypeScore=67.2542;InbreedingCoeff=0.9406;MQ=88.32;MQ0=2;MQRankSum=-1.206;QD=30.04;ReadPosRankSum=7.761;VQSLOD=3.1498;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:65.54:0,66,506	0/0:5,0:5:12.02:0,12,135	0/0:28,0:22:40.33:0,40,382	0/0:21,0:17:28.63:0,29,257	0/0:13,0:13:20.95:0,21,190	1/1:0,9:9:27.09:361,27,0	1/1:0,23:23:54.18:734,54,0	0/0:10,0:10:26.85:0,27,210	1/1:1,15:16:30.09:404,30,0	0/0:8,0:8:8.99:0,9,90	0/0:6,0:6:9:0,9,77	0/0:15,0:15:42.02:0,42,437	1/1:1,7:8:21.06:284,21,0	1/1:2,14:16:36.09:466,36,0	1/1:1,4:5:12.04:157,12,0	0/0:7,0:7:21.01:0,21,225	0/0:14,0:14:3.31:0,3,89	0/0:19,0:19:42.86:0,43,435	0/0:9,0:9:26.52:0,27,186	0/0:13,0:13:23.72:0,24,167	0/0:13,0:12:26.80:0,27,197	1/1:0,9:9:21.07:285,21,0	1/1:0,13:13:33.11:449,33,0	1/1:0,12:12:15.05:201,15,0	1/1:1,11:12:27.07:355,27,0	0/0:17,0:17:44.79:0,45,347	0/0:11,0:11:26.80:0,27,202	0/0:9,0:9:14.84:0,15,102
chr10	102490225	.	G	GAGGATGCTTGC	53943.06	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-5.922;DP=597;FS=2.107;HRun=0;HaplotypeScore=153.9145;InbreedingCoeff=0.9900;MQ=73.54;MQ0=2;MQRankSum=-16.315;QD=121.22;ReadPosRankSum=-1.731;VQSLOD=5.1290;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,19:36:75.26:3869,75,0	0/0:10,0:10:30.10:0,30,1014	0/0:14,0:14:33.11:0,33,955	0/0:23,0:23:57.19:0,57,1709	0/0:21,0:21:60.19:0,60,2003	1/1:7,14:25:60.16:3160,60,0	1/1:9,12:27:60.20:3123,60,0	1/1:20,8:30:90.30:4334,90,0	1/1:6,7:16:42.14:2017,42,0	0/0:21,0:21:63.22:0,63,2199	0/0:24,0:24:66.23:0,66,2321	0/0:20,0:20:57.20:0,57,1896	1/1:6,13:24:57.20:3225,57,0	1/1:2,15:23:51.18:2929,51,0	1/1:6,11:20:51.18:2869,51,0	0/0:19,0:19:51.17:0,51,1737	1/1:4,10:23:39.13:2016,39,0	1/1:9,8:18:39.13:2105,39,0	1/1:14,7:22:57.20:2552,57,0	1/1:11,13:27:69.19:3428,69,0	1/1:8,6:18:30.06:1543,30,0	1/1:5,12:20:51.18:2815,51,0	1/1:7,10:21:42.61:2266,43,0	1/1:8,7:17:30.10:1616,30,0	1/1:8,13:24:54.18:2951,54,0	1/1:7,11:22:63.22:3111,63,0	1/1:10,12:26:63.22:3497,63,0	1/1:0,3:4:9.03:518,9,0
chr10	102490908	.	A	AT	10164.60	PASS	AB=0.542;AC=35;AF=0.625;AN=56;BaseQRankSum=-14.091;DP=571;FS=2.989;HRun=9;HaplotypeScore=53.9704;InbreedingCoeff=0.9229;MQ=72.66;MQ0=1;MQRankSum=-0.712;QD=27.11;ReadPosRankSum=-0.883;VQSLOD=5.0165;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:31.19:541,31,0	0/0:11,0:11:29.98:0,30,257	0/0:12,0:12:26.94:0,27,226	0/0:12,0:11:20.80:0,21,159	0/0:26,0:27:71.02:0,71,605	1/1:3,19:22:48.13:531,48,0	1/1:0,10:10:24.06:258,24,0	1/1:10,26:34:81.16:874,81,0	1/1:0,16:16:45.12:498,45,0	0/0:31,0:32:82.97:0,83,700	0/0:24,0:24:65.98:0,66,573	0/0:15,0:15:32.99:0,33,286	1/1:3,15:18:42.11:465,42,0	1/1:2,9:11:17.84:199,18,0	0/1:2,11:13:15.98:296,0,16	0/0:21,1:22:26.78:0,27,455	0/0:23,0:23:56.96:0,57,495	0/0:18,0:18:41.99:0,42,365	1/1:5,20:25:60.12:650,60,0	1/1:2,24:26:72.11:769,72,0	1/1:1,25:26:72.19:796,72,0	1/1:3,17:20:50.99:532,51,0	1/1:4,21:25:66.16:721,66,0	1/1:1,15:16:45.12:498,45,0	1/1:1,19:20:31.10:571,31,0	1/1:4,29:33:64.19:936,64,0	1/1:5,15:19:45.12:498,45,0	1/1:1,16:17:48.13:531,48,0
chr10	102491403	.	CTGTGTGTGTGTG	C	1320.91	PASS	AB=0.775;AC=19;AF=0.413;AN=46;BaseQRankSum=5.301;DP=601;FS=22.490;HRun=0;HaplotypeScore=189.7106;InbreedingCoeff=0.5960;MQ=69.52;MQ0=13;MQRankSum=-4.885;QD=6.14;ReadPosRankSum=0.276;VQSLOD=1.3829;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:11,0:11:15.04:0,15,497	./.	./.	0/0:18,0:18:12.04:0,12,456	./.	1/1:21,0:20:6:86,6,0	0/0:18,0:18:3.01:0,3,93	1/1:22,4:26:9.02:307,9,0	0/0:28,0:27:33.72:0,34,1193	0/0:17,0:17:18.06:0,18,892	0/0:23,0:23:30.06:0,30,990	1/1:14,0:14:5.98:49,6,0	1/1:17,8:25:9.03:280,9,0	0/1:22,8:31:8.92:375,0,9	0/0:21,0:21:30.10:0,30,1458	0/0:23,0:22:23.97:0,24,297	0/0:15,0:13:4.50:0,4,22	0/0:14,0:14:3.90:0,4,99	0/0:4,0:4:3.01:0,3,170	0/0:42,0:41:48.13:0,48,1652	1/1:17,0:16:0.47:1,0,0	1/1:20,0:20:0.47:1,0,0	1/1:13,8:21:3.48:103,3,0	1/1:15,1:16:3.01:102,3,0	1/1:20,0:24:6.02:167,6,0	0/0:21,0:21:27.07:0,27,1065	./.
chr10	102491663	.	CTGTTGTTGT	C	7846.12	PASS	AB=0.750;AC=21;AF=0.375;AN=56;BaseQRankSum=7.441;DP=699;FS=7.462;HRun=0;HaplotypeScore=211.0167;InbreedingCoeff=0.8942;MQ=55.61;MQ0=2;MQRankSum=-10.498;QD=28.43;ReadPosRankSum=4.645;VQSLOD=2.9804;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:35:36.12:715,36,0	0/0:15,0:14:27.09:0,27,1129	0/0:24,0:19:15.04:0,15,272	0/0:22,0:14:17.55:0,18,441	0/0:15,0:15:24.08:0,24,972	1/1:7,5:12:15.05:414,15,0	0/1:22,11:33:79.82:683,0,80	0/0:50,0:50:78.26:0,78,2854	1/1:10,24:32:66.23:1803,66,0	0/0:33,0:31:45.15:0,45,1688	0/0:21,0:16:34.65:0,35,1149	0/0:22,0:23:54.18:0,54,2311	1/1:7,11:20:30.10:787,30,0	1/1:12,11:23:30.10:828,30,0	1/1:15,15:29:33.11:891,33,0	0/0:29,0:29:45.15:0,45,2052	0/0:26,0:33:70.11:0,70,2471	0/0:10,0:20:18.06:0,18,631	0/0:20,0:21:18.06:0,18,689	0/0:19,0:19:24.08:0,24,715	0/0:36,0:35:42.14:0,42,1428	1/1:9,10:19:18.06:496,18,0	1/1:17,2:19:6.02:165,6,0	1/1:18,10:28:14.28:412,14,0	1/1:15,7:22:27.09:652,27,0	0/0:23,0:25:45.15:0,45,1641	0/0:15,0:19:33.11:0,33,1297	0/0:9,0:13:21.07:0,21,740
chr10	102491702	.	TTCCTCC	T	2555.66	PASS	AB=0.875;AC=10;AF=0.179;AN=56;BaseQRankSum=-2.273;DP=658;FS=7.009;HRun=0;HaplotypeScore=226.6972;InbreedingCoeff=0.6603;MQ=43.28;MQ0=13;MQRankSum=-3.489;QD=16.07;ReadPosRankSum=-2.416;VQSLOD=1.8810;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:33:96.49:96,0,422	0/0:16,0:15:42.12:0,42,1147	0/0:18,0:6:14.97:0,15,413	0/0:39,0:16:24.96:0,25,524	0/0:12,0:10:24.01:0,24,565	0/0:14,0:13:39.12:0,39,811	0/0:25,0:24:45.85:0,46,1048	0/1:30,15:35:31.96:966,0,32	0/0:41,0:40:99:0,108,1653	0/0:26,0:22:60.03:0,60,1434	0/0:17,0:17:33.06:0,33,911	0/0:26,0:26:66.22:0,66,1837	0/0:24,0:24:60.03:0,60,967	0/0:19,0:19:51.14:0,51,843	0/0:32,0:31:81.22:0,81,1550	0/0:24,0:23:66.23:0,66,2164	0/0:32,0:30:65.90:0,66,1482	0/0:19,0:19:35.86:0,36,887	1/1:12,7:15:27.53:493,28,0	1/1:14,0:13:27.06:506,27,0	1/1:29,3:29:11.10:549,11,0	0/0:24,0:22:50.80:0,51,864	0/0:9,0:10:15.03:0,15,256	0/0:27,0:26:48.12:0,48,848	0/0:16,0:17:51.10:0,51,824	0/0:25,0:24:42.19:0,42,621	1/1:14,1:14:0.08:101,0,0	0/0:12,0:12:12.74:0,13,66
chr10	102491705	.	C	CTCCTCCTCCT	9968.14	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=0.708;DP=677;FS=8.941;HRun=0;HaplotypeScore=274.9372;InbreedingCoeff=0.9102;MQ=42.17;MQ0=18;MQRankSum=-8.314;QD=35.73;ReadPosRankSum=-1.492;VQSLOD=2.4797;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:31:32.08:0,32,249	0/0:16,0:15:26.99:0,27,501	0/1:22,0:8:0.89:1,0,13	0/0:47,0:16:5.31:0,5,73	0/0:13,0:11:12.04:0,12,360	1/1:15,0:14:30.04:648,30,0	1/1:28,0:27:50.82:942,51,0	0/0:44,0:34:12.72:0,13,189	1/1:43,2:44:86.93:1804,87,0	0/0:28,0:22:16.96:0,17,543	0/0:15,0:15:27:0,27,453	0/0:24,0:23:42.11:0,42,972	1/1:25,2:27:50.97:1371,51,0	1/1:20,1:20:38.99:776,39,0	1/1:32,2:33:60.16:1619,60,0	0/0:24,0:23:13.11:0,13,1046	0/0:32,0:30:36.10:0,36,921	0/0:20,0:20:27.51:0,28,547	0/0:15,0:11:11.38:0,11,130	0/0:13,0:12:11.96:0,12,204	0/0:29,0:27:38.10:0,38,531	1/1:23,1:21:38.18:655,38,0	1/1:6,6:13:17.96:579,18,0	1/1:28,2:30:30.86:646,31,0	1/1:16,2:19:33.06:927,33,0	0/0:23,0:22:25.82:0,26,648	0/0:11,0:11:17.96:0,18,255	0/0:8,0:8:11.12:0,11,256
chr10	102491708	.	C	CT	818.27	PASS	AB=0.897;AC=8;AF=0.143;AN=56;BaseQRankSum=1.813;DP=710;FS=5.785;HRun=1;HaplotypeScore=196.9484;InbreedingCoeff=0.5903;MQ=41.78;MQ0=23;MQRankSum=-2.557;QD=6.71;ReadPosRankSum=-3.309;VQSLOD=-0.6311;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:31:77.59:0,78,674	0/0:15,0:14:42.11:0,42,527	0/0:26,0:9:18.02:0,18,218	0/0:52,0:14:24.54:0,25,295	0/0:12,0:10:24.01:0,24,289	0/0:15,0:14:18.44:0,18,408	0/0:29,0:28:66.47:0,66,732	0/1:44,7:39:41.25:398,0,41	0/0:45,0:43:99:0,102,1148	0/0:30,1:25:44.33:0,44,709	0/0:14,0:14:33.05:0,33,408	0/0:25,0:24:72.21:0,72,911	0/0:27,0:27:59.38:0,59,657	0/0:25,0:24:44.96:0,45,522	0/0:36,0:34:62.90:0,63,862	0/0:28,0:25:72.20:0,72,916	0/0:31,0:29:68.90:0,69,813	0/0:18,0:18:43.34:0,43,518	1/1:16,1:14:24.38:221,24,0	1/1:5,5:9:4.27:172,4,0	0/1:29,3:28:28.76:98,0,29	0/0:26,0:23:48.11:0,48,586	0/0:14,0:14:9.63:0,10,95	0/0:32,0:30:46.50:0,46,535	0/0:20,0:19:52.20:0,52,523	0/0:25,0:24:57.86:0,58,481	1/1:12,0:11:4.24:67,4,0	0/0:8,0:8:23.23:0,23,154
chr10	102491793	.	CCTTCCTCCTCCTT	C	1803.99	PASS	AB=0.958;AC=8;AF=0.143;AN=56;BaseQRankSum=8.316;DP=869;FS=14.333;HRun=0;HaplotypeScore=247.6732;InbreedingCoeff=0.1125;MQ=38.33;MQ0=96;MQRankSum=-6.426;QD=6.09;ReadPosRankSum=-1.651;VQSLOD=0.6561;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:51,0:44:99:107,0,1844	0/0:12,0:9:20.66:0,21,529	0/0:48,0:2:3.01:0,3,65	0/1:93,0:4:19.66:20,0,27	0/0:12,0:11:24.08:0,24,823	0/0:23,0:16:33.10:0,33,1121	0/1:46,0:42:6.10:6,0,1758	0/0:57,0:36:84.30:0,84,1415	0/0:31,0:26:38.26:0,38,1359	0/0:51,0:35:69.05:0,69,3122	0/0:10,0:8:17.98:0,18,544	0/0:17,0:15:39.13:0,39,1502	0/0:29,0:24:54.12:0,54,1579	0/0:33,0:26:56.74:0,57,1444	0/0:42,0:32:26.05:0,26,2013	0/0:34,0:23:66.11:0,66,2372	0/0:21,0:17:42.01:0,42,879	0/0:15,0:15:36:0,36,1205	0/0:25,0:9:27.08:0,27,795	0/0:13,0:10:11.71:0,12,828	0/0:44,0:38:22.13:0,22,1720	0/0:16,0:10:24.06:0,24,734	0/0:17,0:16:30.10:0,30,877	0/1:45,0:42:41.98:42,0,1700	0/1:23,0:17:87.35:87,0,1435	0/1:16,8:24:99:1185,0,178	0/0:19,0:15:42.09:0,42,1161	1/1:11,2:11:27.03:496,27,0
chr10	102491882	.	C	CT	833.12	PASS	AB=0.872;AC=5;AF=0.089;AN=56;BaseQRankSum=7.930;DP=1093;FS=1.873;HRun=1;HaplotypeScore=202.1859;InbreedingCoeff=-0.1015;MQ=39.56;MQ0=23;MQRankSum=-2.924;QD=4.93;ReadPosRankSum=0.954;VQSLOD=0.2668;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:46:99:0,106,1299	0/0:19,0:16:45.14:0,45,576	0/0:21,0:8:18.06:0,18,234	0/0:30,1:7:12.03:0,12,146	0/0:15,0:15:39.12:0,39,494	0/0:41,1:34:59.68:0,60,919	0/0:70,1:66:99:0,111,1792	0/0:36,1:26:24.89:0,25,446	0/0:69,0:60:99:0,152,1827	0/0:55,1:48:99:0,126,1416	0/0:22,0:21:44.16:0,44,499	0/0:20,0:17:18.02:0,18,215	0/0:55,0:49:96.17:0,96,1354	0/0:53,0:47:99:0,119,1366	0/0:49,0:35:70.62:0,71,895	0/0:21,0:16:30:0,30,369	0/0:19,0:15:18.05:0,18,219	0/0:9,0:9:8.35:0,8,115	0/1:22,1:17:5.76:6,0,402	0/1:30,4:34:99:176,0,444	0/1:41,8:43:99:158,0,607	0/0:59,0:56:99:0,141,1637	0/0:45,0:44:77.59:0,78,1134	0/0:76,0:72:99:0,157,1885	0/0:55,2:52:99:0,114,1243	0/1:32,15:44:99:549,0,290	0/0:22,2:21:8.16:0,8,412	0/1:14,2:15:56.92:57,0,129
chr10	102491894	.	T	TTCC	187.65	PASS	AB=0.954;AC=7;AF=0.125;AN=56;BaseQRankSum=9.043;DP=1091;FS=9.079;HRun=0;HaplotypeScore=242.7252;InbreedingCoeff=0.4576;MQ=38.27;MQ0=21;MQRankSum=-1.526;QD=1.08;ReadPosRankSum=-4.282;VQSLOD=0.3403;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:43,2:41:95.73:96,0,968	0/0:24,0:21:19.22:0,19,445	0/0:31,0:8:14.64:0,15,153	0/0:41,0:6:11.77:0,12,144	0/0:17,0:16:30.10:0,30,460	0/0:37,1:30:14.59:0,15,876	0/0:72,0:67:99:0,145,1957	0/0:36,0:21:45.13:0,45,638	0/0:63,1:57:28.02:0,28,1691	0/0:64,0:53:99:0,100,1699	0/0:21,0:19:26:0,26,647	0/0:15,0:13:20.56:0,21,290	0/0:49,0:43:99:0,100,1297	0/0:57,0:50:91.67:0,92,1557	0/0:57,0:44:57.32:0,57,1208	0/0:20,0:13:29.47:0,29,373	1/1:18,0:15:7.78:48,8,0	1/1:9,1:10:8.91:105,9,0	0/0:26,0:21:44.97:0,45,596	0/0:35,0:35:40.72:0,41,822	0/0:46,1:41:52.64:0,53,865	0/0:57,0:54:72.38:0,72,1591	0/1:47,1:47:4.99:5,0,1100	0/0:73,0:68:99:0,149,2135	0/1:49,2:47:60.84:61,0,1165	0/0:35,1:34:53.57:0,54,904	0/0:25,0:20:18.44:0,18,349	0/0:11,0:10:25.75:0,26,186
chr10	102491914	.	TTCC	T	116.99	PASS	AB=0.992;AC=6;AF=0.107;AN=56;BaseQRankSum=8.186;DP=1041;FS=34.943;HRun=0;HaplotypeScore=251.2299;InbreedingCoeff=0.1690;MQ=39.53;MQ0=22;MQRankSum=-6.679;QD=0.78;ReadPosRankSum=-2.604;VQSLOD=1.2605;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:33:78.49:0,78,1136	0/0:23,0:19:19.41:0,19,526	0/0:34,0:7:2.02:0,2,71	0/0:54,0:11:20.25:0,20,253	0/0:23,0:20:30.55:0,31,477	0/0:30,0:24:41.92:0,42,574	0/0:70,2:67:27.34:0,27,1922	0/0:37,0:28:25.05:0,25,684	0/0:62,0:54:78.02:0,78,1849	0/0:65,2:54:58.21:0,58,1935	0/0:27,0:22:26.08:0,26,712	0/0:14,0:12:17.94:0,18,282	0/0:45,1:39:25.83:0,26,894	0/0:53,1:47:70.34:0,70,1394	0/0:50,0:45:73.26:0,73,1498	0/0:25,0:17:25.89:0,26,484	1/1:12,0:8:3.06:8,3,0	0/0:7,0:6:1.24:0,1,3	0/0:25,0:19:50.99:0,51,756	0/0:32,0:32:20:0,20,733	0/1:45,0:40:39.47:39,0,712	0/1:53,0:48:2:2,0,1327	0/0:40,0:39:60.87:0,61,1316	0/0:64,0:61:99:0,112,1999	0/0:39,0:36:16.51:0,17,985	0/1:30,1:29:76.51:77,0,500	0/0:25,0:19:35.87:0,36,473	0/1:9,0:9:98.05:98,0,104
chr10	102491934	.	TC	T	1042.56	PASS	AB=0.884;AC=18;AF=0.321;AN=56;BaseQRankSum=12.806;DP=912;FS=110.343;HRun=3;HaplotypeScore=241.0771;InbreedingCoeff=-0.4635;MQ=37.91;MQ0=30;MQRankSum=-9.387;QD=1.85;ReadPosRankSum=0.169;VQSLOD=0.0269;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:32,2:30:35.71:36,0,616	0/0:17,0:14:25.86:0,26,328	0/0:37,1:8:18:0,18,234	0/0:67,2:10:18.81:0,19,288	0/0:21,2:20:46.04:0,46,641	0/1:21,5:20:30.28:30,0,387	0/1:63,4:61:99:117,0,1244	0/1:24,4:18:22.80:23,0,389	0/1:49,4:45:77.42:77,0,1012	0/1:47,11:47:96.50:97,0,1300	0/0:25,2:21:46.69:0,47,651	0/0:8,0:6:9.02:0,9,129	0/1:31,4:29:99:129,0,498	0/0:39,3:39:30.80:0,31,1046	0/0:41,2:40:23.23:0,23,1132	0/1:27,2:22:3.61:4,0,673	0/1:12,1:8:19.52:20,0,75	0/1:7,1:7:29.83:30,0,38	0/1:21,3:20:41.94:42,0,404	0/1:14,8:19:99:210,0,296	0/1:26,7:31:99:156,0,310	0/1:35,5:33:11.05:11,0,870	0/0:28,1:28:19.01:0,19,780	0/0:48,4:47:64.44:0,64,1277	0/1:30,4:31:15.21:15,0,701	0/1:28,0:27:53.07:53,0,462	0/1:12,8:15:99:110,0,118	0/1:9,0:9:41.75:42,0,70
chr10	102491957	.	T	TTCC	5522.96	PASS	AB=0.986;AC=29;AF=0.518;AN=56;BaseQRankSum=1.920;DP=836;FS=1.529;HRun=0;HaplotypeScore=267.0669;InbreedingCoeff=-0.0470;MQ=31.35;MQ0=66;MQRankSum=-5.108;QD=8.88;ReadPosRankSum=-0.536;VQSLOD=4.2694;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:28:99:244,0,194	0/1:13,0:10:59.44:59,0,65	0/0:36,0:3:2.97:0,3,20	0/0:67,0:6:6.08:0,6,57	0/0:24,0:18:39.02:0,39,478	1/1:23,1:20:2.12:262,2,0	0/1:57,0:53:51.72:473,0,52	0/1:25,1:12:83.41:83,0,100	1/1:45,0:37:19.32:531,19,0	0/1:64,0:54:99:182,0,956	0/0:24,0:18:18.96:0,19,550	0/0:15,0:9:8.59:0,9,224	1/1:23,2:22:13.79:243,14,0	0/1:39,0:36:43.88:307,0,44	1/1:39,0:34:50.90:580,51,0	0/0:34,0:22:19.68:0,20,615	0/0:13,0:9:3.21:0,3,132	0/1:8,0:8:35.82:36,0,36	0/1:25,0:19:47.24:158,0,47	0/1:17,0:11:27.93:120,0,28	1/1:31,2:30:10.76:394,11,0	0/1:29,1:25:6.07:409,0,6	1/1:22,0:21:4.51:170,5,0	0/1:43,0:39:14.62:390,0,15	1/1:29,1:27:12.55:459,13,0	0/1:24,0:22:53.87:286,0,54	1/1:14,1:11:14.11:104,14,0	0/1:4,0:4:24.41:30,0,24
chr10	102491962	.	C	CCTT	2179.08	PASS	AB=0.984;AC=22;AF=0.393;AN=56;BaseQRankSum=2.457;DP=788;FS=10.486;HRun=0;HaplotypeScore=264.9289;InbreedingCoeff=-0.5158;MQ=30.36;MQ0=67;MQRankSum=-0.918;QD=3.71;ReadPosRankSum=-0.967;VQSLOD=0.1800;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:26:99:123,0,190	0/1:13,0:9:23.72:24,0,35	0/0:32,0:1:1.82:0,2,5	0/0:62,0:4:3.01:0,3,37	0/0:22,0:17:27:0,27,368	0/1:22,0:19:21.92:87,0,22	0/1:52,0:47:99:166,0,174	0/1:26,0:12:27.85:28,0,120	0/1:43,1:37:99:244,0,134	0/1:63,1:51:42.66:43,0,934	0/0:23,0:17:40.61:0,41,483	0/0:16,0:10:17.02:0,17,240	0/1:21,0:19:41.92:119,0,42	0/1:37,0:35:90.33:101,0,90	0/1:37,0:32:33.58:220,0,34	0/0:33,0:22:28.86:0,29,540	0/0:12,0:8:7.73:0,8,145	0/1:8,0:8:16.69:17,0,43	0/1:25,1:18:82.66:83,0,155	0/1:16,1:11:25.20:94,0,25	1/1:27,2:27:14.12:262,14,0	0/1:30,0:25:40.82:143,0,41	0/1:15,0:14:12.28:62,0,12	0/1:42,0:37:95.97:100,0,96	0/1:25,0:24:79.44:213,0,79	0/1:24,0:20:99:143,0,160	0/1:15,0:11:11.67:55,0,12	0/1:3,0:3:11.91:12,0,12
chr10	102491971	.	TCCTC	T	3965.91	PASS	AB=0.888;AC=22;AF=0.393;AN=56;BaseQRankSum=1.201;DP=716;FS=16.579;HRun=0;HaplotypeScore=237.8268;InbreedingCoeff=-0.6715;MQ=27.41;MQ0=62;MQRankSum=-1.067;QD=7.47;ReadPosRankSum=-3.774;VQSLOD=1.0345;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,2:24:99:381,0,174	0/0:10,0:6:10.01:0,10,125	0/0:30,0:1:1.82:0,2,5	0/0:47,0:1:3.01:0,3,38	0/0:18,0:14:29.81:0,30,681	0/1:19,2:18:99:160,0,119	0/1:36,7:40:99:441,0,506	0/1:23,1:13:25.96:26,0,264	0/1:32,6:33:99:539,0,288	0/0:55,1:45:53.90:0,54,1889	0/0:22,0:17:41.35:0,41,692	0/1:19,1:15:45.13:45,0,433	0/1:16,4:18:86.13:276,0,86	0/1:29,4:31:99:141,0,416	0/1:23,8:28:99:432,0,148	0/1:28,1:21:40.02:40,0,927	0/1:11,1:8:23.79:24,0,200	0/1:8,0:8:37.07:37,0,67	0/1:24,4:20:99:179,0,357	0/1:13,0:8:91.58:92,0,123	0/1:26,1:25:99:192,0,218	0/1:28,0:23:99:106,0,302	0/1:11,1:12:65.71:128,0,66	0/1:30,8:32:99:268,0,257	0/1:22,2:21:99:231,0,259	0/1:23,2:21:66.02:66,0,501	0/1:11,1:10:46.97:112,0,47	0/1:2,1:3:12.20:51,0,12
chr10	102491974	.	TC	T	879.24	PASS	AB=0.963;AC=21;AF=0.375;AN=56;BaseQRankSum=3.779;DP=678;FS=0.626;HRun=2;HaplotypeScore=221.5056;InbreedingCoeff=-0.4965;MQ=26.67;MQ0=58;MQRankSum=-2.282;QD=1.94;ReadPosRankSum=0.471;VQSLOD=-0.7387;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,2:24:99:220,0,147	0/0:9,0:5:9.02:0,9,112	0/0:29,0:1:2.96:0,3,19	0/0:46,0:1:3.01:0,3,34	0/0:18,0:14:30.01:0,30,415	0/1:21,0:18:42.65:43,0,179	0/1:38,1:34:91.28:91,0,337	0/0:23,0:12:21.71:0,22,197	0/1:36,2:33:70.81:71,0,394	0/0:53,0:42:81.59:0,82,1129	0/0:22,0:16:38.80:0,39,477	0/1:20,0:15:12.85:13,0,252	0/1:20,1:18:58.49:58,0,152	0/1:32,0:29:17.95:18,0,427	0/1:28,2:26:77.06:77,0,197	0/1:28,0:19:9.04:9,0,536	0/1:10,2:8:7.96:8,0,126	0/1:7,0:7:11.73:12,0,69	0/1:28,0:20:10.82:11,0,289	0/1:14,0:7:31.71:32,0,76	0/1:26,0:25:88.79:89,0,156	0/1:24,2:21:44.16:44,0,291	0/1:12,1:13:62.97:63,0,64	0/1:36,1:31:13.27:13,0,234	0/1:21,1:20:78.71:79,0,257	0/0:24,0:20:37.75:0,38,456	0/1:9,1:9:51.07:68,0,51	1/1:1,0:1:2.92:17,3,0
chr10	102491976	.	CT	C	1760.63	PASS	AB=0.901;AC=24;AF=0.429;AN=56;BaseQRankSum=3.959;DP=652;FS=3.215;HRun=2;HaplotypeScore=211.9247;InbreedingCoeff=-0.5451;MQ=26.61;MQ0=51;MQRankSum=-4.137;QD=3.59;ReadPosRankSum=-1.174;VQSLOD=-0.1659;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,8:24:85.99:340,0,86	0/0:7,1:5:9.03:0,9,113	1/1:27,0:1:0.47:1,0,0	0/0:41,1:1:2.92:0,3,17	0/0:18,0:14:32.80:0,33,426	0/1:18,2:18:69.86:70,0,168	0/1:36,3:34:99:133,0,394	0/0:19,1:11:15.88:0,16,202	0/1:31,6:32:99:225,0,304	0/0:49,2:40:19.56:0,20,1026	0/0:22,0:16:29.61:0,30,402	0/1:19,1:15:51.23:51,0,242	0/1:17,4:18:99:143,0,115	0/1:29,3:29:59.76:60,0,399	0/1:26,4:26:99:172,0,128	0/1:25,2:19:7.03:7,0,523	0/1:12,0:8:49.11:49,0,120	0/1:6,1:7:26.81:27,0,46	0/1:25,1:18:33.38:33,0,251	0/1:13,1:7:20.88:21,0,75	0/1:19,6:24:99:117,0,177	0/1:21,1:18:42.55:43,0,226	0/1:11,1:12:26.67:69,0,27	0/1:33,3:30:65.11:65,0,201	0/1:16,4:18:99:158,0,121	0/1:21,2:20:19.79:20,0,274	0/1:9,1:9:54.40:75,0,54	1/1:1,0:1:3.01:36,3,0
chr10	102491980	.	C	CTCCTCCT	4937.58	PASS	AB=0.970;AC=30;AF=0.577;AN=52;BaseQRankSum=5.254;DP=606;FS=64.266;HRun=0;HaplotypeScore=278.4385;InbreedingCoeff=-0.2485;MQ=26.65;MQ0=45;MQRankSum=-3.766;QD=9.76;ReadPosRankSum=1.111;VQSLOD=1.8576;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:23:53.14:53,0,257	0/1:7,0:4:1.36:14,0,1	./.	./.	0/1:17,0:14:14.66:15,0,394	0/1:18,1:17:22.99:340,0,23	0/1:35,1:32:26:349,0,26	0/1:17,0:8:46.36:88,0,46	0/1:36,0:32:42.79:411,0,43	0/1:43,0:37:99:571,0,642	0/0:19,0:13:8.61:0,9,170	0/1:21,0:16:0.88:1,0,323	1/1:20,1:18:9.61:410,10,0	1/1:30,0:27:25.83:493,26,0	0/1:25,2:24:6.33:392,0,6	0/0:28,0:20:40.20:0,40,645	0/1:12,0:8:32.07:32,0,78	1/1:6,0:6:5.82:36,6,0	0/1:23,0:17:46.58:47,0,50	0/1:15,0:8:20.33:45,0,20	1/1:23,0:24:13.45:309,13,0	0/1:18,2:17:26.31:93,0,26	1/1:8,1:10:13.43:309,13,0	0/1:35,1:30:20.73:98,0,21	1/1:16,0:17:30.59:389,31,0	0/1:23,0:19:46.90:314,0,47	1/1:9,0:8:14.39:128,14,0	0/0:1,0:1:1.82:0,2,5
chr10	102492810	.	TG	T	7665.59	PASS	AB=0.810;AC=48;AF=0.960;AN=50;BaseQRankSum=-2.557;DP=355;FS=0.000;HRun=2;HaplotypeScore=127.7228;InbreedingCoeff=-0.0605;MQ=60.49;MQ0=5;MQRankSum=-5.027;QD=21.59;ReadPosRankSum=3.397;VQSLOD=4.7604;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,3:6:13.74:130,14,0	1/1:2,6:8:23.99:284,24,0	0/1:12,6:8:50.55:92,0,51	0/1:21,3:14:23.65:24,0,161	1/1:0,10:9:23.56:281,24,0	1/1:0,5:6:17.64:202,18,0	1/1:2,19:17:47.55:542,48,0	./.	1/1:1,12:12:32.79:365,33,0	1/1:7,20:29:74.14:803,74,0	1/1:4,17:19:48.07:590,48,0	1/1:1,12:17:42.88:402,43,0	1/1:0,7:7:17.54:197,18,0	1/1:1,11:13:37.78:406,38,0	1/1:4,11:13:32.04:340,32,0	1/1:2,11:16:42.95:448,43,0	1/1:2,14:13:38.98:461,39,0	1/1:4,6:10:20.43:234,20,0	1/1:0,1:1:3.01:39,3,0	1/1:0,1:1:3.01:39,3,0	1/1:6,5:8:9.03:116,9,0	1/1:3,11:13:24.90:289,25,0	1/1:4,14:18:36.10:451,36,0	1/1:2,7:9:27.06:315,27,0	1/1:3,17:19:39.13:499,39,0	1/1:11,4:11:9.03:117,9,0	./.	./.
chr10	102492901	.	CGTT	C	1636.26	PASS	AB=0.939;AC=25;AF=0.481;AN=52;BaseQRankSum=-1.563;DP=346;FS=2.833;HRun=0;HaplotypeScore=85.7850;InbreedingCoeff=-0.2268;MQ=40.69;MQ0=14;MQRankSum=-5.799;QD=5.99;ReadPosRankSum=-2.280;VQSLOD=2.0541;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,4:12:20.97:263,21,0	0/1:12,0:12:40.42:145,0,40	0/0:23,0:3:2.92:0,3,8	0/0:16,0:3:0.71:0,1,2	0/1:14,0:15:84.19:84,0,129	0/1:9,0:8:35.60:36,0,64	0/1:20,0:14:9.18:9,0,250	1/1:1,2:2:6.02:81,6,0	0/0:8,0:8:11.76:0,12,135	0/1:31,0:30:82.05:293,0,82	0/1:13,0:16:20.20:162,0,20	0/1:10,0:9:9.25:9,0,62	0/0:6,0:5:6.44:0,6,57	0/1:11,0:11:24.16:24,0,50	0/0:9,0:7:5.44:0,5,55	1/1:17,0:14:12.77:83,13,0	0/1:10,0:9:42.33:42,0,80	0/1:11,0:9:32.39:32,0,33	1/1:0,7:7:13.24:136,13,0	1/1:6,0:6:8.98:93,9,0	0/1:22,1:17:3.47:92,0,3	0/0:10,0:10:16.40:0,16,209	0/1:5,0:6:24.43:75,0,24	0/1:12,0:12:25.84:26,0,124	0/1:11,1:17:97.52:98,0,150	0/1:16,0:12:11.11:11,0,64	./.	./.
chr10	102493564	.	G	GT	1060.16	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.085;DP=709;FS=1.960;HRun=9;HaplotypeScore=87.4867;InbreedingCoeff=0.9971;MQ=77.75;MQ0=0;MQRankSum=-0.346;QD=23.56;ReadPosRankSum=0.132;VQSLOD=4.1139;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,884	0/0:11,0:11:24.91:0,25,245	0/0:24,0:23:42.17:0,42,360	0/0:17,0:17:35.38:0,35,283	0/0:24,0:24:62.97:0,63,547	0/0:25,0:25:68.96:0,69,595	0/0:27,0:27:57.22:0,57,622	0/0:30,0:30:74.91:0,75,638	0/0:26,0:26:71.96:0,72,619	0/0:33,0:33:63.92:0,64,723	0/0:23,0:23:68.99:0,69,598	0/0:26,0:26:65.97:0,66,573	0/0:18,0:18:53.99:0,54,469	0/0:31,0:31:89.98:0,90,780	0/0:29,0:29:83.96:0,84,725	0/0:22,0:22:62.99:0,63,547	0/0:25,0:25:65.98:0,66,573	0/0:14,0:14:35.97:0,36,307	0/0:24,0:24:62.96:0,63,541	0/0:26,0:26:77.98:0,78,677	0/0:23,0:23:65.96:0,66,568	0/0:26,0:26:62.94:0,63,538	0/0:37,0:37:92.94:0,93,804	0/0:26,1:28:32.77:0,33,509	0/0:25,0:25:71.95:0,72,618	1/1:4,24:28:46.12:728,46,0	0/0:33,0:33:86.95:0,87,749	1/1:3,14:17:21.91:453,22,0
chr10	102493698	.	CTGTGTG	C	1967.95	PASS	AB=0.775;AC=26;AF=0.520;AN=50;BaseQRankSum=5.090;DP=661;FS=2.201;HRun=0;HaplotypeScore=182.0558;InbreedingCoeff=0.5295;MQ=68.58;MQ0=9;MQRankSum=-1.376;QD=5.51;ReadPosRankSum=0.714;VQSLOD=2.6600;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:30:9:0,9,121	0/0:12,0:13:11.25:0,11,410	./.	0/0:31,0:21:2.43:0,2,48	0/0:16,1:19:36.04:0,36,704	./.	1/1:22,2:28:13.22:100,13,0	0/1:29,0:29:9.01:166,0,9	1/1:11,16:28:12.01:243,12,0	0/0:21,0:23:2.13:0,2,466	0/0:15,0:17:27.03:0,27,546	0/0:29,0:31:39.09:0,39,964	1/1:9,15:26:20.93:286,21,0	1/1:13,9:22:6.35:58,6,0	0/0:4,16:21:1.55:0,2,4	0/0:18,0:20:27.08:0,27,689	0/1:10,2:29:3.71:124,0,4	1/1:16,1:28:16.97:101,17,0	1/1:8,6:13:8.75:213,9,0	1/1:5,7:14:2.97:20,3,0	0/1:29,0:29:18.32:93,0,18	0/0:11,14:25:2.94:0,3,20	0/1:11,16:29:0:0,0,0	./.	1/1:11,8:20:3.01:41,3,0	1/1:11,0:27:25.44:402,25,0	1/1:5,10:16:9.03:165,9,0	1/1:4,0:11:9.03:125,9,0
chr10	102494174	.	ATT	A	9555.53	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.346;DP=699;FS=6.796;HRun=3;HaplotypeScore=84.5397;InbreedingCoeff=0.9985;MQ=83.32;MQ0=3;MQRankSum=-7.242;QD=40.32;ReadPosRankSum=4.900;VQSLOD=4.1646;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,2477	0/0:6,0:6:18.06:0,18,348	0/0:27,0:27:81.27:0,81,1483	0/0:17,0:17:50.17:0,50,796	0/0:35,0:35:99:0,102,1906	1/1:0,16:16:45.15:689,45,0	1/1:0,23:23:63.21:965,63,0	0/0:35,0:35:99:0,105,2028	1/1:0,22:22:54.18:827,54,0	0/0:32,0:32:96.32:0,96,1806	0/0:26,0:26:75.26:0,75,1441	0/0:20,0:20:57.18:0,57,1048	1/1:1,24:25:63.21:965,63,0	1/1:0,29:28:81.28:1240,81,0	1/1:0,30:28:72.24:1103,72,0	0/0:31,0:31:90.31:0,90,1739	0/0:24,0:24:72.23:0,72,1357	0/0:16,0:16:45.15:0,45,870	0/0:28,0:28:81.28:0,81,1543	0/0:30,0:30:90.31:0,90,1717	0/0:21,0:21:63.21:0,63,1185	1/1:0,20:20:54.18:827,54,0	1/1:0,33:33:96.33:1470,96,0	1/1:0,22:22:60.20:919,60,0	1/1:0,17:17:36.12:551,36,0	0/0:35,0:35:99:0,105,1976	0/0:27,0:27:78.27:0,78,1507	0/0:8,0:8:24.08:0,24,464
chr10	102495140	.	TTTTG	T	9314.59	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=12.593;DP=678;FS=4.004;HRun=0;HaplotypeScore=122.9942;InbreedingCoeff=0.8693;MQ=65.01;MQ0=5;MQRankSum=-0.846;QD=19.45;ReadPosRankSum=0.674;VQSLOD=4.3696;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:31:36.32:344,36,0	0/0:7,0:7:21.07:0,21,498	0/0:26,0:21:3.01:0,3,64	0/0:22,0:14:10.28:0,10,177	0/0:32,0:32:54.18:0,54,1262	1/1:7,18:25:48.16:756,48,0	1/1:5,15:20:36.12:567,36,0	1/1:35,0:34:5.93:42,6,0	1/1:10,13:23:21.07:331,21,0	0/0:40,1:41:28.01:0,28,1635	0/0:23,0:23:42.14:0,42,970	0/0:30,0:30:54.17:0,54,1227	1/1:5,18:23:45.15:709,45,0	1/1:4,14:18:42.14:661,42,0	1/1:8,23:31:60.20:946,60,0	0/0:18,0:18:33.11:0,33,763	1/1:12,12:24:32.60:519,33,0	1/1:10,2:12:0.65:87,1,0	1/1:16,0:20:14.84:122,15,0	1/1:12,1:34:54.03:505,54,0	1/1:17,0:17:3.01:35,3,0	1/1:6,18:24:54.09:795,54,0	1/1:6,22:28:41.90:658,42,0	1/1:11,17:29:45.15:709,45,0	1/1:6,14:20:30.10:473,30,0	1/1:8,13:21:39.13:615,39,0	1/1:11,0:26:27.03:252,27,0	1/1:10,7:17:12.04:189,12,0
chr10	102497587	.	GA	G	138.66	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.352;DP=285;FS=1.397;HRun=8;HaplotypeScore=31.8875;InbreedingCoeff=0.6711;MQ=73.94;MQ0=0;MQRankSum=-1.012;QD=12.61;ReadPosRankSum=-1.562;VQSLOD=1.5111;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:24.03:232,24,0	0/0:5,0:5:12.04:0,12,145	0/0:7,0:7:17.92:0,18,197	0/0:5,0:4:9.03:0,9,109	0/0:11,0:11:27.08:0,27,326	0/0:10,0:10:18.04:0,18,206	0/0:5,0:5:9.03:0,9,109	0/0:38,0:38:61.33:0,61,996	0/0:7,0:7:18.06:0,18,217	0/0:6,0:6:15.05:0,15,181	0/0:12,0:12:36.07:0,36,418	0/0:8,0:8:24.07:0,24,290	0/0:7,0:7:21.06:0,21,254	0/0:10,0:10:27.08:0,27,326	0/0:11,0:11:27.03:0,27,301	0/0:8,0:8:24.07:0,24,290	0/0:24,0:24:60.17:0,60,713	0/0:13,0:13:27.08:0,27,326	0/0:9,0:9:21.06:0,21,254	0/0:13,0:13:36.10:0,36,423	0/0:5,0:5:12.04:0,12,145	0/0:2,0:2:6.02:0,6,72	0/0:6,0:6:8.88:0,9,97	0/0:4,0:4:8.99:0,9,92	0/0:10,0:10:21.06:0,21,254	0/0:7,0:7:18.06:0,18,217	0/0:12,0:12:36.11:0,36,435	0/0:19,0:19:51.16:0,51,615
chr10	102497613	.	C	CAAT	1389.36	PASS	AB=0.857;AC=27;AF=0.519;AN=52;BaseQRankSum=-4.181;DP=219;FS=7.584;HRun=0;HaplotypeScore=31.7177;InbreedingCoeff=0.5059;MQ=62.43;MQ0=1;MQRankSum=-0.680;QD=14.03;ReadPosRankSum=1.716;VQSLOD=1.3682;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:2.98:22,3,0	0/0:3,0:4:5.99:0,6,61	0/1:4,0:3:0:0,0,0	./.	0/0:4,0:4:6.02:0,6,80	0/1:2,5:8:28.10:162,0,28	1/1:2,2:4:3.01:58,3,0	0/0:26,0:28:20.99:0,21,229	1/1:3,1:5:6.02:97,6,0	0/0:7,0:7:9.02:0,9,109	0/0:11,0:11:15.05:0,15,200	0/0:5,0:5:3:0,3,25	1/1:5,4:9:12.04:232,12,0	1/1:4,1:5:3.01:58,3,0	1/1:1,5:6:12.04:213,12,0	1/1:3,5:8:12.04:233,12,0	0/0:9,0:22:29.15:0,29,197	0/0:4,0:7:5.95:0,6,42	0/0:16,0:16:23.80:0,24,278	0/0:8,0:8:2.60:0,3,10	0/0:5,0:5:9.03:0,9,120	./.	1/1:1,1:2:3.01:58,3,0	1/1:0,2:3:3.01:58,3,0	1/1:3,4:7:6.02:116,6,0	1/1:2,1:4:6.02:97,6,0	0/1:10,0:10:37.02:37,0,204	1/1:11,0:18:9.03:117,9,0
chr10	102499028	.	GCGCGCACACACACACACACACACACACACA	G	337.52	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=0.297;DP=438;FS=12.833;HRun=0;HaplotypeScore=192.7176;InbreedingCoeff=0.1337;MQ=55.23;MQ0=27;MQRankSum=0.303;QD=3.48;ReadPosRankSum=-0.910;VQSLOD=1.6099;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,28:33:6.02:380,6,0	0/0:9,0:9:21.07:0,21,1971	0/0:2,0:2:3:0,3,25	0/0:10,0:4:5.44:0,5,27	0/0:13,0:13:24.08:0,24,1897	0/0:18,0:18:5.28:0,5,360	0/1:23,0:20:21.95:22,0,743	0/0:17,0:12:11.68:0,12,756	0/0:4,0:4:3:0,3,25	0/0:24,0:21:57.19:0,57,3648	0/0:13,0:12:33.07:0,33,2274	0/0:5,0:5:12.03:0,12,782	0/1:11,0:11:33.37:33,0,155	0/1:14,0:12:11.74:12,0,19	0/0:4,0:3:3.01:0,3,123	0/0:6,0:6:18.06:0,18,1515	0/0:49,0:45:77.57:0,78,3423	0/0:25,0:25:66.18:0,66,3499	0/0:20,0:19:34.91:0,35,1117	0/0:5,0:5:3.01:0,3,286	0/0:22,0:16:16.86:0,17,1241	0/0:12,0:12:15.05:0,15,800	1/1:14,0:14:0.47:1,0,0	0/0:30,0:30:5.58:0,6,163	0/0:22,0:22:1.83:0,2,433	0/0:16,0:13:36.11:0,36,2165	0/0:7,0:7:12.46:0,12,453	0/0:7,0:4:2.97:0,3,20
chr10	102499030	.	GCGCACACACACACA	G	839.69	PASS	AB=0.770;AC=22;AF=0.407;AN=54;BaseQRankSum=0.701;DP=434;FS=0.719;HRun=0;HaplotypeScore=110.0112;InbreedingCoeff=0.5409;MQ=55.09;MQ0=28;MQRankSum=1.644;QD=4.22;ReadPosRankSum=2.133;VQSLOD=1.8345;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:33:6.01:126,6,0	0/0:9,0:9:19.24:0,19,738	0/0:2,0:2:2.94:0,3,18	0/1:8,0:4:0.87:1,0,14	0/0:13,0:13:24.78:0,25,837	0/1:4,14:18:18.49:108,0,18	1/1:22,0:19:18.74:162,19,0	0/0:16,0:11:4.02:0,4,145	./.	0/0:26,0:23:55.75:0,56,1546	0/0:14,0:13:7.15:0,7,928	0/0:6,0:6:9.02:0,9,352	1/1:11,0:11:13.34:112,13,0	1/1:11,0:9:2.99:24,3,0	1/1:1,3:3:3.01:97,3,0	0/0:6,0:6:17.91:0,18,662	0/0:52,0:47:15.61:0,16,553	0/0:24,0:24:14.82:0,15,392	0/0:19,0:18:12.03:0,12,265	0/0:5,0:5:3.01:0,3,69	0/0:23,0:17:12.26:0,12,247	1/1:12,0:12:14.94:117,15,0	0/1:1,14:15:0:0,0,0	1/1:3,26:28:2.71:93,3,0	1/1:22,0:22:17.98:148,18,0	0/0:16,0:13:31.62:0,32,565	0/1:7,0:7:15.65:16,0,60	1/1:5,0:2:2.60:10,3,0
chr10	102499032	.	GCACACACACA	G	341.16	PASS	AB=0.908;AC=11;AF=0.275;AN=40;BaseQRankSum=4.979;DP=432;FS=18.361;HRun=0;HaplotypeScore=95.0795;InbreedingCoeff=0.4134;MQ=54.70;MQ0=27;MQRankSum=-2.114;QD=1.91;ReadPosRankSum=0.737;VQSLOD=0.0006;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:33:5.85:84,6,0	0/0:11,0:11:18.06:0,18,634	./.	./.	0/0:16,0:16:18.06:0,18,684	1/1:18,0:19:3.48:83,3,0	0/0:21,0:19:0.89:0,1,2	0/0:16,0:11:8.39:0,8,81	./.	0/0:25,0:22:36.59:0,37,1008	0/0:11,0:10:18.06:0,18,659	0/0:6,0:6:6.02:0,6,259	0/0:11,0:11:1.36:0,1,3	./.	1/1:4,0:3:3.01:59,3,0	0/0:7,0:7:12.04:0,12,516	0/1:36,16:47:3.88:4,0,111	0/1:23,0:24:99:164,0,100	0/0:20,0:19:6.43:0,6,94	./.	0/0:15,0:16:5.69:0,6,73	./.	0/1:16,0:16:0:0,0,0	1/1:29,0:28:2.80:64,3,0	./.	0/0:12,0:12:10.43:0,10,140	0/0:6,0:6:0:0,0,0	./.
chr10	102501133	.	G	GA	1063.39	PASS	AB=0.914;AC=13;AF=0.232;AN=56;BaseQRankSum=14.100;DP=626;FS=143.671;HRun=0;HaplotypeScore=192.8692;InbreedingCoeff=-0.2933;MQ=59.81;MQ0=1;MQRankSum=-10.975;QD=3.28;ReadPosRankSum=-2.249;VQSLOD=0.2604;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:4.88:0,5,599	0/1:10,1:11:64.02:64,0,224	0/0:23,0:19:51.14:0,51,687	0/0:23,0:20:52.02:0,52,669	0/1:30,1:31:2.03:2,0,656	0/1:20,3:23:51.16:51,0,723	0/0:35,1:36:87.55:0,88,1141	0/0:13,1:11:24.43:0,24,367	0/1:17,2:19:55.15:55,0,529	0/1:29,2:30:99:197,0,629	0/1:26,4:32:91.95:92,0,432	0/0:21,0:21:61.34:0,61,755	0/0:18,0:18:30.81:0,31,625	0/0:15,0:15:44.81:0,45,519	0/0:16,0:16:48.10:0,48,637	0/0:20,0:20:60.07:0,60,755	0/0:32,0:33:48.29:0,48,1205	0/0:12,0:12:36.12:0,36,500	0/1:14,0:14:16.14:16,0,376	0/1:22,2:23:92.69:93,0,390	0/0:16,0:16:45.14:0,45,611	0/1:26,1:27:82.80:83,0,611	0/1:26,0:26:6.81:7,0,433	0/0:28,0:28:72.14:0,72,960	0/1:26,1:30:99:272,0,423	0/1:33,2:36:89.57:90,0,1072	0/1:13,6:19:99:191,0,393	0/0:5,0:5:15.01:0,15,188
chr10	102501179	.	A	AG	1385.50	PASS	AC=48;AF=1.000;AN=48;DP=196;FS=0.000;HRun=1;HaplotypeScore=225.4170;InbreedingCoeff=-0.0243;MQ=30.51;MQ0=0;QD=7.14;VQSLOD=0.3980;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:10.41:60,10,0	1/1:3,0:3:5.33:27,5,0	./.	./.	1/1:8,1:9:12.28:74,12,0	1/1:11,0:11:23.08:131,23,0	1/1:10,1:11:11.50:63,12,0	./.	1/1:6,1:7:13.07:67,13,0	1/1:9,1:10:15.46:69,15,0	1/1:9,1:10:14.93:84,15,0	1/1:9,1:10:4.20:22,4,0	1/1:8,0:8:6.72:41,7,0	1/1:3,1:4:11.42:59,11,0	1/1:9,1:10:17.07:103,17,0	1/1:8,2:10:16.77:85,17,0	1/1:5,0:5:2.74:12,3,0	1/1:5,0:5:6.43:27,6,0	./.	1/1:5,0:5:8.46:43,8,0	1/1:5,0:5:5.90:37,6,0	1/1:11,1:12:23.26:136,23,0	1/1:5,2:7:8.84:54,9,0	1/1:12,0:12:17.12:86,17,0	1/1:4,1:5:5.91:38,6,0	1/1:17,1:18:19.78:88,20,0	1/1:4,1:5:6.68:35,7,0	1/1:1,0:1:2.97:20,3,0
chr10	102503495	.	TA	T	4890.74	PASS	AB=0.933;AC=37;AF=0.661;AN=56;BaseQRankSum=8.165;DP=502;FS=15.372;HRun=11;HaplotypeScore=64.9488;InbreedingCoeff=0.9145;MQ=67.20;MQ0=4;MQRankSum=-1.591;QD=13.85;ReadPosRankSum=2.037;VQSLOD=3.4503;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,20:25:53.91:443,54,0	0/0:9,0:9:21.04:0,21,215	0/0:17,0:8:17.99:0,18,165	0/0:8,0:5:6.55:0,7,45	0/0:21,0:21:51.05:0,51,509	1/1:4,14:18:35.94:295,36,0	1/1:2,9:12:26.01:203,26,0	1/1:10,0:24:29.15:84,29,0	1/1:5,12:17:32.96:271,33,0	0/1:13,1:14:3.59:4,0,166	0/0:17,0:20:41.71:0,42,394	0/0:16,0:16:33.08:0,33,352	1/1:1,15:16:41.95:345,42,0	1/1:2,14:16:11.34:268,11,0	1/1:1,9:10:23.97:197,24,0	0/0:17,1:18:14.44:0,14,346	0/0:20,1:21:32.50:0,32,550	0/0:17,0:19:35.05:0,35,381	1/1:2,0:22:39.79:130,40,0	1/1:2,0:16:28.52:82,29,0	1/1:3,0:17:27.42:92,27,0	1/1:3,17:21:49.97:400,50,0	1/1:4,15:20:37.99:301,38,0	1/1:1,5:6:11.98:99,12,0	1/1:2,27:29:71.91:591,72,0	1/1:5,28:33:83.66:672,84,0	1/1:1,0:15:26.48:77,26,0	1/1:5,15:21:34.21:338,34,0
chr10	102503918	.	TC	T	3472.04	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.209;DP=637;FS=24.012;HRun=1;HaplotypeScore=167.3432;InbreedingCoeff=0.9809;MQ=76.63;MQ0=1;MQRankSum=-10.625;QD=29.42;ReadPosRankSum=-1.807;VQSLOD=1.0310;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:83.61:0,84,1025	0/0:7,0:7:21.06:0,21,312	0/0:31,0:24:63.15:0,63,879	0/0:34,1:32:60.57:0,61,825	0/0:15,0:15:45.14:0,45,688	0/0:19,0:19:41.97:0,42,400	0/0:28,0:28:47.87:0,48,577	1/1:3,23:26:73.59:903,74,0	0/0:29,0:29:59.40:0,59,708	0/0:17,0:17:51.13:0,51,767	0/0:8,0:8:21.06:0,21,309	0/0:30,0:30:87.30:0,87,1381	0/0:27,0:27:64.92:0,65,737	0/0:32,0:32:85.26:0,85,972	0/0:30,0:30:66.13:0,66,897	0/0:22,0:22:66.16:0,66,981	0/0:23,0:22:59.93:0,60,645	0/0:26,0:26:65.84:0,66,738	1/1:0,23:23:63.18:854,63,0	1/1:2,18:20:27.09:371,27,0	1/1:2,12:14:14.72:175,15,0	0/0:8,0:8:10.06:0,10,104	0/0:8,0:8:17.98:0,18,211	0/0:30,0:29:47.65:0,48,509	0/0:21,0:21:50.86:0,51,665	0/0:23,0:23:58.43:0,58,705	1/1:3,32:35:87.25:1170,87,0	0/0:11,0:11:26.92:0,27,264
chr10	102503919	.	CGCGT	C	7205.16	PASS	AB=0.940;AC=37;AF=0.661;AN=56;BaseQRankSum=6.349;DP=623;FS=1.023;HRun=0;HaplotypeScore=186.4118;InbreedingCoeff=0.7127;MQ=76.22;MQ0=1;MQRankSum=1.417;QD=15.60;ReadPosRankSum=3.832;VQSLOD=4.6790;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,19:37:36.12:583,36,0	0/0:6,0:6:9.03:0,9,217	0/0:32,0:25:24.96:0,25,379	0/0:34,0:31:17.79:0,18,229	0/0:16,0:16:30.09:0,30,638	1/1:8,10:18:33.11:535,33,0	1/1:9,18:27:24.01:389,24,0	0/1:23,0:26:6.79:9,0,7	1/1:13,11:24:27.09:438,27,0	0/0:17,0:17:27.09:0,27,641	0/0:7,0:7:12.03:0,12,261	0/0:29,0:29:59.55:0,60,1270	1/1:11,15:26:32.38:533,32,0	1/1:14,17:31:51.17:823,51,0	1/1:15,14:29:17.94:292,18,0	0/0:20,0:20:45.15:0,45,993	1/1:7,16:22:39.13:632,39,0	1/1:9,17:26:42.14:681,42,0	0/1:23,0:23:32.67:33,0,54	1/1:20,0:22:9.39:53,9,0	1/1:13,0:15:1.92:12,2,0	1/1:3,4:7:12.04:191,12,0	1/1:4,4:8:9.03:146,9,0	1/1:5,25:29:36.12:584,36,0	1/1:12,9:21:15.05:243,15,0	1/1:11,11:22:35.78:569,36,0	0/1:33,0:36:69.37:120,0,69	1/1:2,9:11:21.07:340,21,0
chr10	102503943	.	T	TAG	1036.06	PASS	AB=0.984;AC=7;AF=0.125;AN=56;BaseQRankSum=11.761;DP=620;FS=4.108;HRun=0;HaplotypeScore=188.0332;InbreedingCoeff=0.5736;MQ=66.02;MQ0=5;MQRankSum=-10.675;QD=9.77;ReadPosRankSum=3.629;VQSLOD=2.9682;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,102,1282	0/0:3,0:3:9.03:0,9,147	0/0:36,0:27:72.30:0,72,1026	0/0:30,0:25:52.69:0,53,882	0/0:16,0:16:48.15:0,48,759	0/0:18,0:18:50.80:0,51,528	0/0:36,0:36:72.43:0,72,924	0/1:24,0:24:99:205,0,210	0/0:18,0:18:44.83:0,45,456	0/0:21,0:21:57.19:0,57,902	0/0:11,0:11:24.08:0,24,387	0/0:24,0:24:72.25:0,72,1169	0/0:22,0:22:48.66:0,49,481	0/0:30,0:30:80.70:0,81,828	0/0:22,0:22:38.78:0,39,422	0/0:28,0:28:81.23:0,81,1264	0/0:27,0:26:71.80:0,72,814	0/0:25,0:25:59.65:0,60,513	0/1:19,1:19:99:260,0,149	1/1:20,3:23:13.91:168,14,0	0/1:11,0:11:1.77:20,0,2	0/0:11,0:11:26.98:0,27,332	0/0:14,0:14:33:0,33,431	0/0:33,0:32:59.76:0,60,619	0/0:15,0:15:29.92:0,30,328	0/0:18,0:18:52.04:0,52,495	1/1:28,0:28:46.41:523,46,0	0/0:9,0:9:20.83:0,21,149
chr10	102503948	.	GCA	G	159.54	PASS	AB=0.904;AC=5;AF=0.089;AN=56;BaseQRankSum=10.130;DP=649;FS=10.080;HRun=0;HaplotypeScore=194.0801;InbreedingCoeff=0.3077;MQ=69.86;MQ0=4;MQRankSum=-8.564;QD=1.86;ReadPosRankSum=3.934;VQSLOD=1.5673;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,107,1609	0/0:4,0:4:12.04:0,12,243	0/0:39,0:31:88.69:0,89,1572	0/0:33,0:27:63.25:0,63,1198	0/0:17,0:17:51.17:0,51,1007	0/0:18,0:18:48.74:0,49,524	0/0:36,0:36:74.63:0,75,1151	0/1:21,3:24:88.19:190,0,88	0/0:21,0:21:53.48:0,53,688	0/0:19,0:19:57.20:0,57,1150	0/0:12,0:12:33.11:0,33,661	0/0:26,0:26:78.25:0,78,1523	0/0:24,0:24:51.74:0,52,579	0/0:31,0:31:82.13:0,82,927	0/0:23,0:23:44.40:0,44,593	0/0:27,0:27:81.28:0,81,1622	0/0:29,0:28:77.05:0,77,987	0/0:26,0:26:68.19:0,68,791	0/0:20,0:19:11.45:0,11,86	0/1:21,2:23:4.52:24,0,5	1/1:9,2:11:3.57:12,4,0	0/0:13,0:13:30.81:0,31,436	0/0:13,0:13:29.18:0,29,463	0/0:34,0:33:61.93:0,62,728	0/0:19,0:19:44.55:0,45,684	0/0:19,0:19:43.76:0,44,562	0/1:25,3:28:26.94:43,0,27	0/0:14,0:14:35.39:0,35,397
chr10	102503950	.	A	ATG	2514.04	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.619;DP=693;FS=2.096;HRun=0;HaplotypeScore=218.1051;InbreedingCoeff=0.9754;MQ=70.17;MQ0=4;MQRankSum=-12.965;QD=17.83;ReadPosRankSum=0.900;VQSLOD=3.8419;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,108,1516	0/0:4,0:4:12.04:0,12,172	0/0:40,0:33:78:0,78,1026	0/0:34,0:28:59.27:0,59,774	0/0:17,0:17:51.17:0,51,729	0/0:18,0:18:51.17:0,51,699	0/0:37,0:37:78.24:0,78,1084	1/1:27,9:36:60.90:852,61,0	0/0:22,0:22:54.64:0,55,743	0/0:20,0:20:57.18:0,57,801	0/0:12,0:12:30.10:0,30,428	0/0:26,0:26:72.23:0,72,1009	0/0:25,0:25:54.16:0,54,741	0/0:32,0:32:84.73:0,85,1146	0/0:23,0:23:45.02:0,45,617	0/0:27,0:27:72.24:0,72,1027	0/0:29,0:28:75.25:0,75,1050	0/0:27,0:27:72.21:0,72,989	1/1:17,8:23:41.31:556,41,0	1/1:13,17:30:23.69:275,24,0	1/1:14,4:18:8.06:94,8,0	0/0:14,0:14:33.09:0,33,439	0/0:13,0:13:30.10:0,30,420	0/0:35,0:34:66.20:0,66,900	0/0:18,0:18:45.15:0,45,634	0/0:20,0:20:52.42:0,52,712	1/1:11,21:32:69.87:909,70,0	0/0:14,0:14:36.12:0,36,501
chr10	102503959	.	TG	T	1556.15	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.404;DP=673;FS=5.274;HRun=2;HaplotypeScore=193.0562;InbreedingCoeff=0.9755;MQ=77.36;MQ0=2;MQRankSum=-12.740;QD=11.97;ReadPosRankSum=0.286;VQSLOD=2.3409;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,129,1897	0/0:7,0:7:21.07:0,21,310	0/0:37,0:33:95.85:0,96,1306	0/0:36,0:30:73.42:0,73,1088	0/0:17,0:17:51.17:0,51,764	0/0:21,0:21:60.18:0,60,869	0/0:35,0:35:93.28:0,93,1368	1/1:27,0:28:68.47:533,68,0	0/0:21,0:21:57.18:0,57,834	0/0:20,0:20:60.19:0,60,860	0/0:12,0:12:33.11:0,33,485	0/0:24,0:24:72.24:0,72,1069	0/0:25,0:25:69.19:0,69,998	0/0:33,0:33:93.31:0,93,1385	0/0:17,0:17:42.14:0,42,629	0/0:24,0:24:72.24:0,72,1068	0/0:30,0:29:84.28:0,84,1252	0/0:29,0:29:84.24:0,84,1226	1/1:20,1:20:40.25:357,40,0	1/1:29,1:30:17.66:183,18,0	1/1:19,1:20:6.82:47,7,0	0/0:15,0:15:39.05:0,39,563	0/0:14,0:14:33.11:0,33,493	0/0:28,0:27:66.21:0,66,968	0/0:17,0:17:48.15:0,48,700	0/0:21,0:21:60.20:0,60,891	1/1:30,1:31:64.59:606,65,0	0/0:12,0:12:36.12:0,36,539
chr10	102503960	.	G	GC	2221.33	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.112;DP=654;FS=10.535;HRun=0;HaplotypeScore=183.1555;InbreedingCoeff=0.9819;MQ=78.41;MQ0=1;MQRankSum=-12.754;QD=20.01;ReadPosRankSum=0.636;VQSLOD=3.7478;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,129,1781	0/0:7,0:7:21.07:0,21,293	0/0:36,0:33:96.14:0,96,1265	0/0:32,0:29:77.04:0,77,1031	0/0:17,0:17:51.17:0,51,713	0/0:21,0:21:60.17:0,60,818	0/0:35,0:35:92.95:0,93,1282	1/1:1,21:22:66.18:886,66,0	0/0:23,0:23:57.18:0,57,780	0/0:20,0:20:60.19:0,60,811	0/0:12,0:12:33.11:0,33,461	0/0:25,0:25:72.24:0,72,1006	0/0:25,0:25:69.19:0,69,942	0/0:33,0:33:93.31:0,93,1298	0/0:18,0:18:42.14:0,42,587	0/0:24,0:24:72.24:0,72,1005	0/0:30,0:29:84.28:0,84,1172	0/0:29,0:29:84.24:0,84,1153	1/1:1,13:13:38.94:493,39,0	1/1:1,28:29:17.73:196,18,0	1/1:1,15:17:8.60:90,9,0	0/0:15,0:15:38.98:0,39,528	0/0:14,0:14:33.11:0,33,461	0/0:27,0:26:66.20:0,66,905	0/0:17,0:17:48.15:0,48,655	0/0:21,0:21:60.20:0,60,836	1/1:1,27:29:65.73:728,66,0	0/0:12,0:12:36.12:0,36,503
chr10	102503964	.	TTTTC	T	1920.75	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.999;DP=633;FS=2.461;HRun=0;HaplotypeScore=199.0549;InbreedingCoeff=0.9745;MQ=80.96;MQ0=1;MQRankSum=-11.324;QD=21.58;ReadPosRankSum=1.136;VQSLOD=3.6023;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,3808	0/0:8,0:8:24.08:0,24,680	0/0:36,0:35:90.10:0,90,2477	0/0:30,0:27:69.32:0,69,1881	0/0:18,0:18:54.19:0,54,1535	0/0:23,0:23:66.23:0,66,1756	0/0:32,0:32:91.55:0,92,2608	1/1:1,12:13:12.87:492,13,0	0/0:23,0:23:66.23:0,66,1876	0/0:18,0:18:54.19:0,54,1536	0/0:13,0:13:36.11:0,36,1043	0/0:27,0:27:81.28:0,81,2292	0/0:25,0:25:69.24:0,69,1993	0/0:37,0:37:99:0,105,2935	0/0:16,0:16:43.70:0,44,1219	0/0:24,0:24:72.25:0,72,2072	0/0:32,0:31:90.27:0,90,2485	0/0:30,0:30:84.27:0,84,2316	1/1:1,11:11:33.07:473,33,0	1/1:1,23:24:20.92:256,21,0	1/1:3,11:14:7.74:62,8,0	0/0:14,0:14:40.38:0,40,1130	0/0:14,0:14:36.12:0,36,963	0/0:25,0:25:72.25:0,72,2076	0/0:18,0:18:51.18:0,51,1461	0/0:21,0:21:63.21:0,63,1759	1/1:1,25:26:63.75:806,64,0	0/0:12,0:12:36.12:0,36,1034
chr10	102503970	.	TAG	T	1543.16	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.079;DP=659;FS=5.453;HRun=0;HaplotypeScore=178.9949;InbreedingCoeff=0.9682;MQ=82.77;MQ0=0;MQRankSum=-11.050;QD=13.42;ReadPosRankSum=-1.893;VQSLOD=3.0574;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,2740	0/0:8,0:8:24.08:0,24,488	0/0:36,0:35:47.38:0,47,1584	0/0:30,0:28:39.34:0,39,1293	0/0:18,0:18:54.17:0,54,1061	0/0:22,0:22:60.21:0,60,1192	0/0:30,0:30:84.29:0,84,1694	1/1:9,12:21:19.10:325,19,0	0/0:26,0:26:75.20:0,75,1482	0/0:20,0:20:60.20:0,60,1179	0/0:14,0:14:39.13:0,39,783	0/0:25,0:25:75.26:0,75,1510	0/0:23,0:23:63.20:0,63,1264	0/0:38,0:38:99:0,108,2072	0/0:16,0:16:45.15:0,45,906	0/0:24,0:24:72.25:0,72,1448	0/0:30,0:30:87.30:0,87,1716	0/0:29,0:29:81.23:0,81,1561	1/1:9,12:20:38.38:407,38,0	1/1:2,24:26:12.53:223,13,0	1/1:6,11:17:6.41:58,6,0	0/0:15,0:15:42.12:0,42,818	0/0:14,0:14:33.11:0,33,660	0/0:26,0:26:75.26:0,75,1482	0/0:18,0:18:51.18:0,51,1027	0/0:21,0:21:63.19:0,63,1161	1/1:5,25:30:65.20:697,65,0	0/0:13,0:13:36.12:0,36,674
chr10	102505425	.	CGAAA	C	1889.46	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=11.617;DP=447;FS=29.460;HRun=0;HaplotypeScore=106.1546;InbreedingCoeff=0.8839;MQ=59.62;MQ0=6;MQRankSum=-10.207;QD=20.10;ReadPosRankSum=-0.351;VQSLOD=1.5769;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,11:18:29.80:425,30,0	0/0:11,0:11:33.07:0,33,746	0/0:29,0:9:16.62:0,17,169	0/1:28,0:13:16.30:16,0,188	0/0:18,0:18:45.98:0,46,1004	0/0:13,0:13:37.92:0,38,846	0/0:22,0:22:57.01:0,57,1346	1/1:0,5:5:12.04:213,12,0	0/0:15,0:15:45.13:0,45,1045	0/0:16,0:16:48.10:0,48,1117	0/0:18,0:18:54.12:0,54,1188	0/0:18,0:18:51.15:0,51,1259	0/0:12,0:12:33.03:0,33,772	0/0:15,0:15:45.09:0,45,923	0/0:25,0:24:69.21:0,69,1855	0/0:17,0:17:51.16:0,51,1225	0/0:28,0:29:87:0,87,1526	0/0:20,0:20:54:0,54,947	1/1:0,9:8:24.04:389,24,0	1/1:0,6:4:12.04:179,12,0	1/1:1,1:2:5.95:59,6,0	0/0:22,0:22:63.11:0,63,1308	0/0:12,0:12:36.12:0,36,873	0/0:18,0:18:53.92:0,54,1217	0/0:21,0:21:60.18:0,60,1567	1/1:2,5:6:17.97:231,18,0	1/1:4,3:7:17.94:195,18,0	1/1:3,7:10:28.76:384,29,0
chr10	102505441	.	ACCCC	A	1492.47	PASS	AB=0.889;AC=15;AF=0.268;AN=56;BaseQRankSum=11.775;DP=486;FS=6.864;HRun=4;HaplotypeScore=118.1397;InbreedingCoeff=0.8542;MQ=63.98;MQ0=3;MQRankSum=-11.987;QD=16.40;ReadPosRankSum=1.646;VQSLOD=-0.1876;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:30.60:413,31,0	0/0:15,0:15:45.15:0,45,1184	0/0:29,0:12:29.71:0,30,631	0/0:29,0:15:36.42:0,36,723	0/0:19,0:19:50.74:0,51,1340	0/0:13,0:13:39.12:0,39,988	0/0:17,0:18:35.50:0,35,1333	1/1:7,0:8:11.75:139,12,0	0/0:16,0:16:48.16:0,48,1287	0/0:27,0:27:78.27:0,78,2087	0/0:19,0:19:57.20:0,57,1549	0/0:17,0:17:51.15:0,51,1258	0/0:16,0:16:45.15:0,45,1205	0/0:13,0:13:39.13:0,39,1022	0/0:23,0:22:66.23:0,66,1738	0/0:17,0:17:51.18:0,51,1375	0/0:33,0:33:99:0,99,1628	0/0:20,0:20:54.18:0,54,885	1/1:11,3:11:24.91:289,25,0	1/1:11,1:9:5.21:114,5,0	1/1:3,1:3:6:84,6,0	0/0:19,0:19:57.20:0,57,1530	0/0:16,0:16:48.15:0,48,1152	0/0:14,0:14:42.14:0,42,1120	0/0:22,0:22:66.23:0,66,1774	0/1:14,2:15:99:261,0,135	1/1:6,1:7:12.02:124,12,0	1/1:9,0:9:26.97:257,27,0
chr10	102505443	.	C	CAAAA	2855.42	PASS	AB=0.583;AC=15;AF=0.268;AN=56;BaseQRankSum=11.174;DP=485;FS=5.556;HRun=0;HaplotypeScore=114.9149;InbreedingCoeff=0.8812;MQ=64.38;MQ0=2;MQRankSum=-11.474;QD=31.73;ReadPosRankSum=0.392;VQSLOD=3.4278;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:22:42.39:531,42,0	0/0:16,0:16:48.15:0,48,917	0/0:29,0:13:29.39:0,29,476	0/0:29,0:15:25.44:0,25,577	0/0:19,0:19:51.37:0,51,1042	0/0:12,0:12:36.12:0,36,715	0/0:20,0:20:59.99:0,60,1047	1/1:2,6:9:18.64:314,19,0	0/0:17,0:17:48.16:0,48,955	0/0:28,0:28:81.27:0,81,1649	0/0:19,0:19:57.20:0,57,1118	0/0:15,0:15:45.15:0,45,936	0/0:17,0:17:45.15:0,45,915	0/0:13,0:13:36.12:0,36,741	0/0:23,0:22:66.23:0,66,1373	0/0:17,0:17:51.17:0,51,1055	0/0:31,0:31:93.13:0,93,1540	0/0:19,0:19:44.73:0,45,787	1/1:8,4:11:26.98:460,27,0	1/1:3,7:8:21.06:366,21,0	1/1:1,1:3:6.02:90,6,0	0/0:19,0:19:57.20:0,57,1147	0/0:15,0:15:45.13:0,45,857	0/0:14,0:14:42.11:0,42,790	0/0:23,0:23:69.23:0,69,1381	0/1:4,8:14:83.74:612,0,84	1/1:1,5:6:12.04:229,12,0	1/1:2,6:9:27.08:450,27,0
chr10	102507504	.	CGT	C	7811.99	PASS	AB=0.542;AC=19;AF=0.339;AN=56;BaseQRankSum=16.900;DP=924;FS=22.356;HRun=0;HaplotypeScore=116.3237;InbreedingCoeff=0.9032;MQ=62.47;MQ0=4;MQRankSum=-0.256;QD=22.71;ReadPosRankSum=-0.074;VQSLOD=3.0801;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,29:51:99:1314,110,0	0/0:21,0:21:56.75:0,57,851	0/0:32,0:18:23.87:0,24,210	0/0:23,0:16:15.02:0,15,195	0/0:37,0:37:99:0,99,1558	0/0:16,2:18:7.61:0,8,608	0/0:36,0:36:78.27:0,78,1248	1/1:9,25:34:68.94:742,69,0	0/0:32,1:33:49.75:0,50,1271	0/0:40,1:41:68.29:0,68,1497	0/0:21,0:21:51.17:0,51,819	0/0:39,3:42:36.83:0,37,1584	0/0:40,2:42:64.79:0,65,1479	0/0:35,2:37:58.17:0,58,1519	0/0:35,1:36:55.80:0,56,1355	0/0:26,2:28:69.22:0,69,1100	1/1:12,20:32:45.11:562,45,0	1/1:9,16:25:64.90:754,65,0	1/1:14,17:29:50.93:553,51,0	1/1:2,22:24:57.18:712,57,0	1/1:8,45:53:62.52:786,63,0	0/0:33,2:35:17.96:0,18,1223	0/0:36,0:36:99:0,102,1618	0/0:27,1:28:34.74:0,35,1032	0/0:32,1:33:15.90:0,16,1253	0/1:7,37:45:28.47:1201,0,28	1/1:4,19:25:38.79:440,39,0	1/1:3,19:23:60.19:747,60,0
chr10	102508273	.	GT	G	903.50	PASS	AB=0.633;AC=8;AF=0.143;AN=56;BaseQRankSum=5.715;DP=665;FS=2.056;HRun=14;HaplotypeScore=82.0483;InbreedingCoeff=0.3874;MQ=73.61;MQ0=2;MQRankSum=0.158;QD=5.83;ReadPosRankSum=2.577;VQSLOD=2.8798;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,16:32:32.20:217,32,0	0/0:15,0:15:33.01:0,33,295	0/0:30,0:25:7.85:0,8,153	0/0:19,1:14:4.78:0,5,123	0/0:34,0:34:57.13:0,57,487	0/0:20,0:20:24.46:0,24,315	0/0:14,0:14:23.85:0,24,205	0/1:15,18:33:23.22:271,0,23	0/0:20,0:22:35.85:0,36,310	0/0:22,0:23:32.84:0,33,280	0/0:21,1:22:30.19:0,30,368	0/0:19,2:24:14.93:0,15,352	0/0:23,0:26:53.75:0,54,453	0/0:16,1:17:12.24:0,12,223	0/0:29,1:35:24.77:0,25,476	0/0:26,3:29:9.92:0,10,355	0/0:19,0:19:25.19:0,25,366	0/0:6,0:10:26.56:0,27,206	1/1:2,6:8:14.80:101,15,0	0/1:18,20:38:14.69:152,0,15	0/1:8,16:25:61.64:203,0,62	0/0:23,0:26:60.53:0,61,508	0/0:19,2:22:15.64:0,16,383	0/0:18,1:24:24.26:0,24,343	0/0:23,3:27:21.66:0,22,461	0/0:28,3:32:3.48:0,3,267	0/1:8,10:19:5.20:105,0,5	0/0:18,0:19:35.82:0,36,301
chr10	102508414	.	CTTGT	C	3021.82	PASS	AB=0.957;AC=15;AF=0.268;AN=56;BaseQRankSum=5.604;DP=622;FS=2.847;HRun=0;HaplotypeScore=118.4411;InbreedingCoeff=0.9003;MQ=66.69;MQ0=0;MQRankSum=-2.433;QD=19.37;ReadPosRankSum=1.370;VQSLOD=3.2244;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,1:38:41.64:0,42,1914	0/0:18,0:18:48.16:0,48,1163	0/0:20,0:17:15.02:0,15,304	0/0:22,0:19:27.09:0,27,600	0/0:22,0:22:45.15:0,45,1088	0/0:25,0:25:54.18:0,54,1270	0/0:15,0:15:39.13:0,39,937	1/1:13,7:20:21.07:340,21,0	0/0:20,0:20:42.14:0,42,1002	0/0:32,0:32:66.23:0,66,1595	0/0:24,0:24:60.20:0,60,1406	0/0:24,0:24:48.16:0,48,1134	0/1:21,1:22:3.49:3,0,949	0/0:23,0:23:51.17:0,51,1181	0/0:32,0:32:72.18:0,72,1559	0/0:27,0:27:48.16:0,48,1155	1/1:5,0:15:14.85:139,15,0	1/1:1,0:3:6.01:56,6,0	1/1:11,11:22:33.08:487,33,0	1/1:4,21:25:57.19:924,57,0	1/1:10,18:28:45.15:730,45,0	0/0:26,0:26:63.22:0,63,1492	0/0:15,0:15:42.13:0,42,963	0/0:24,0:24:48.16:0,48,1163	0/0:17,0:17:48.16:0,48,1163	0/0:33,0:33:90.30:0,90,2119	1/1:10,11:21:33.11:535,33,0	0/0:9,0:9:9.03:0,9,218
chr10	102508603	.	ATC	A	397.65	PASS	AB=0.932;AC=17;AF=0.304;AN=56;BaseQRankSum=1.719;DP=727;FS=15.022;HRun=0;HaplotypeScore=110.2217;InbreedingCoeff=-0.1682;MQ=72.43;MQ0=11;MQRankSum=2.263;QD=1.15;ReadPosRankSum=3.497;VQSLOD=0.6827;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:41,3:47:40.31:40,0,449	1/1:7,0:8:5.85:47,6,0	0/0:45,0:21:3.01:0,3,37	0/0:54,0:23:0.47:0,0,1	0/0:32,0:32:30.07:0,30,404	1/1:17,0:16:5.68:43,6,0	0/1:18,1:20:32.09:32,0,407	0/0:27,0:27:12.04:0,12,161	0/0:17,1:17:35.95:0,36,488	0/1:19,1:20:11.68:12,0,212	0/1:18,1:19:17.81:18,0,144	0/1:17,5:23:68.43:68,0,279	0/1:20,2:22:35.66:36,0,258	0/1:27,1:28:32.51:33,0,361	0/1:29,0:28:2.72:3,0,327	0/1:19,1:21:22.91:23,0,241	0/0:13,0:25:21.01:0,21,194	0/0:15,0:22:20:0,20,184	0/1:21,1:22:49.40:49,0,104	0/1:29,3:31:35.65:36,0,229	0/0:33,0:32:36.09:0,36,485	0/0:22,0:22:27:0,27,364	0/1:18,2:20:53.64:54,0,78	0/0:27,0:28:35.53:0,36,615	0/1:19,0:19:60.19:60,0,238	0/0:28,0:37:59.41:0,59,588	0/0:18,2:20:0.24:0,0,361	0/0:15,0:15:9.01:0,9,89
chr10	102510184	.	GC	G	8405.92	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=19.188;DP=656;FS=3.047;HRun=1;HaplotypeScore=95.3820;InbreedingCoeff=0.9993;MQ=95.04;MQ0=0;MQRankSum=-2.142;QD=39.28;ReadPosRankSum=1.300;VQSLOD=5.2477;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1802	0/0:9,0:9:27.07:0,27,408	0/0:31,0:30:87.22:0,87,1278	0/0:29,0:29:84.27:0,84,1287	0/0:20,0:20:60.18:0,60,929	0/0:22,0:22:63.21:0,63,1005	0/0:25,0:25:75.26:0,75,1199	1/1:0,31:31:93.29:1281,93,0	0/0:23,0:23:69.19:0,69,1032	0/0:23,0:23:66.22:0,66,1036	0/0:20,0:20:60.20:0,60,959	0/0:16,0:16:48.16:0,48,765	0/0:25,0:25:75.26:0,75,1191	0/0:24,0:24:72.24:0,72,1134	0/0:31,0:31:93.32:0,93,1487	0/0:23,0:23:69.22:0,69,1078	1/1:0,33:33:90.30:1258,90,0	1/1:0,12:12:36.12:503,36,0	1/1:0,15:15:45.12:609,45,0	1/1:0,34:34:99:1382,99,0	1/1:0,34:34:93.31:1300,93,0	0/0:23,0:23:69.24:0,69,1096	0/0:20,0:20:57.19:0,57,911	0/0:23,0:23:66.23:0,66,1055	0/0:17,0:17:51.17:0,51,815	1/1:1,25:26:27.25:940,27,0	1/1:0,20:20:57.19:796,57,0	1/1:0,9:9:24.08:336,24,0
chr10	102511446	.	AAGTC	A	5603.64	PASS	AB=0.604;AC=18;AF=0.346;AN=52;BaseQRankSum=6.791;DP=812;FS=3.738;HRun=0;HaplotypeScore=109.5451;InbreedingCoeff=0.8251;MQ=30.66;MQ0=160;MQRankSum=-3.544;QD=18.80;ReadPosRankSum=0.184;VQSLOD=4.5309;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:46:99:0,108,2942	0/0:12,0:7:21.07:0,21,570	./.	./.	0/0:32,0:29:69.24:0,69,1768	1/1:4,20:20:27.09:523,27,0	1/1:6,27:29:60.21:1162,60,0	0/0:42,0:33:87.26:0,87,2089	1/1:4,36:34:42.14:773,42,0	0/0:23,0:20:60.21:0,60,1619	0/0:28,0:26:69.22:0,69,1727	0/0:31,0:25:72.24:0,72,1858	1/1:8,25:24:33.11:618,33,0	0/1:8,23:23:42.79:657,0,43	1/1:4,24:21:24.08:465,24,0	0/0:27,0:25:69.24:0,69,1816	0/0:46,0:29:63.22:0,63,1661	0/0:43,0:23:60.21:0,60,1567	0/0:19,0:15:39.13:0,39,971	0/0:33,0:23:66.21:0,66,1702	0/0:54,0:22:57.15:0,57,1463	1/1:4,24:19:15.05:282,15,0	1/1:5,20:20:21.07:386,21,0	0/1:14,19:18:64.12:272,0,64	1/1:3,20:19:24.08:465,24,0	0/0:20,0:18:42.14:0,42,1115	0/0:24,0:17:45.15:0,45,1186	0/0:24,0:19:51.17:0,51,1267
chr10	102511535	.	C	CT	961.87	PASS	AB=0.533;AC=3;AF=0.054;AN=56;BaseQRankSum=8.102;DP=727;FS=10.292;HRun=1;HaplotypeScore=91.0885;InbreedingCoeff=0.6482;MQ=53.66;MQ0=7;MQRankSum=-8.045;QD=26.72;ReadPosRankSum=-1.079;VQSLOD=2.1783;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:99:0,117,1496	0/0:10,0:10:27.09:0,27,350	0/0:27,0:14:39.13:0,39,506	0/0:20,0:13:36.08:0,36,431	0/0:18,0:18:51.14:0,51,633	0/0:20,0:20:48.16:0,48,623	0/0:24,0:24:60.20:0,60,778	0/0:36,0:32:81.26:0,81,1040	0/0:21,0:21:42.14:0,42,545	0/0:18,0:18:51.17:0,51,662	0/0:14,0:14:39.13:0,39,506	0/0:28,0:28:78.25:0,78,1012	0/0:25,0:25:63.20:0,63,818	0/0:28,0:28:72.23:0,72,933	0/0:33,0:32:72.23:0,72,935	0/0:32,1:32:90.29:0,90,1168	0/0:28,0:28:75.24:0,75,968	0/0:29,0:28:75.22:0,75,953	0/0:23,0:20:54.18:0,54,701	0/0:22,0:22:60.19:0,60,778	0/0:46,0:44:99:0,120,1529	0/0:25,0:25:66.21:0,66,857	0/0:19,0:19:48.14:0,48,608	0/0:35,0:33:84.27:0,84,1088	0/0:33,0:32:93.28:0,93,1179	0/1:3,21:22:23.75:664,0,24	0/0:31,0:31:90.29:0,90,1168	1/1:2,10:12:27.09:404,27,0
chr10	102512070	.	TGGGTGCTATGTGCGTGC	T	15862.40	PASS	AB=0.947;AC=21;AF=0.375;AN=56;BaseQRankSum=15.753;DP=665;FS=5.395;HRun=0;HaplotypeScore=316.0426;InbreedingCoeff=0.9193;MQ=89.62;MQ0=0;MQRankSum=-16.188;QD=74.12;ReadPosRankSum=4.871;VQSLOD=3.8880;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,7503	0/0:7,0:7:18.06:0,18,1052	0/0:31,0:31:78.26:0,78,4304	0/0:32,0:32:75.26:0,75,4161	0/0:15,0:15:42.14:0,42,2985	1/1:4,17:21:51.18:2432,51,0	1/1:5,14:19:24.08:1128,24,0	0/0:29,0:29:81.27:0,81,4924	1/1:6,19:25:54.19:2604,54,0	0/0:23,0:23:63.21:0,63,4126	0/0:22,0:22:63.22:0,63,4677	0/0:32,0:32:93.32:0,93,7201	1/1:5,13:18:33.11:1579,33,0	1/1:3,12:15:18.06:872,18,0	1/1:7,15:22:39.13:1889,39,0	0/1:17,1:18:91.17:91,0,3849	0/0:47,0:47:99:0,135,9941	0/0:23,0:23:64.77:0,65,4457	0/0:21,0:21:48.16:0,48,3028	0/0:27,0:27:78.25:0,78,6019	0/0:51,0:51:99:0,141,10399	1/1:6,19:25:39.09:1672,39,0	1/1:0,15:15:21.03:1017,21,0	1/1:5,14:19:21.54:999,22,0	1/1:4,13:15:33.11:1579,33,0	0/0:21,0:21:57.20:0,57,4161	0/0:25,0:25:72.25:0,72,5551	0/0:7,0:7:21.07:0,21,1371
chr10	102513121	.	C	CA	16989.22	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-15.124;DP=696;FS=4.232;HRun=1;HaplotypeScore=61.1236;InbreedingCoeff=0.9998;MQ=95.07;MQ0=0;MQRankSum=-3.956;QD=40.45;ReadPosRankSum=2.608;VQSLOD=5.6056;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.24:0,75,974	0/0:10,0:10:30.07:0,30,361	0/0:33,0:33:93.27:0,93,1170	0/0:33,0:33:85.55:0,86,1089	0/0:20,0:20:51.15:0,51,647	1/1:0,17:16:51.14:740,51,0	1/1:1,24:25:66.22:989,66,0	1/1:0,24:23:72.24:1078,72,0	1/1:0,22:22:57.19:854,57,0	0/0:31,0:30:90.29:0,90,1169	0/0:25,0:25:69.21:0,69,879	0/0:26,0:26:78.25:0,78,1013	1/1:1,29:30:75.25:1124,75,0	1/1:1,31:32:87.26:1280,87,0	1/1:2,30:32:84.28:1259,84,0	0/0:23,0:23:66.21:0,66,857	0/0:34,0:34:99:0,99,1285	0/0:16,0:16:48.16:0,48,623	1/1:5,11:16:42.13:600,42,0	1/1:0,29:29:75.25:1123,75,0	1/1:2,30:32:87.29:1304,87,0	1/1:0,23:23:63.13:894,63,0	1/1:3,20:23:63.21:928,63,0	1/1:1,23:24:69.23:1034,69,0	1/1:0,27:27:69.23:1033,69,0	1/1:1,22:23:30.28:951,30,0	1/1:1,30:31:90.30:1349,90,0	1/1:0,10:10:30.10:450,30,0
chr10	102516987	.	TG	T	3534.84	PASS	AB=0.822;AC=27;AF=0.482;AN=56;BaseQRankSum=11.738;DP=499;FS=21.618;HRun=3;HaplotypeScore=123.0608;InbreedingCoeff=0.7386;MQ=65.12;MQ0=2;MQRankSum=-7.635;QD=14.49;ReadPosRankSum=-1.230;VQSLOD=1.8152;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.09:0,75,980	0/0:12,0:12:36.12:0,36,513	0/0:23,0:18:50.21:0,50,524	0/0:12,0:10:12.39:0,12,141	0/0:33,0:33:99:0,99,1308	0/1:10,4:14:11.92:168,0,12	0/1:14,2:16:44.37:83,0,44	1/1:1,19:19:21.24:443,21,0	1/1:7,8:15:16.43:204,16,0	0/0:23,0:23:69.20:0,69,921	0/0:16,0:16:45.11:0,45,589	0/0:15,0:15:45.11:0,45,587	1/1:7,5:12:6.33:134,6,0	1/1:2,6:8:23.52:162,24,0	1/1:9,8:17:38.64:297,39,0	0/0:9,0:9:27.06:0,27,333	0/0:18,0:17:50.82:0,51,461	0/0:19,0:18:50.30:0,50,455	1/1:20,0:20:51.59:379,52,0	1/1:18,6:24:60.35:474,60,0	1/1:4,0:4:4.21:24,4,0	0/1:15,5:20:18.04:236,0,18	1/1:9,8:17:27.51:214,28,0	1/1:7,5:12:7.38:158,7,0	1/1:14,17:31:28.86:437,29,0	0/0:25,0:25:74.89:0,75,724	1/1:14,0:14:19:121,19,0	0/0:25,0:25:73.78:0,74,833
chr10	102516995	.	TTTTG	T	7865.70	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=11.021;DP=497;FS=2.621;HRun=0;HaplotypeScore=147.5866;InbreedingCoeff=0.6887;MQ=63.20;MQ0=2;MQRankSum=-5.075;QD=23.91;ReadPosRankSum=2.551;VQSLOD=4.8928;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:48.12:0,48,910	0/0:12,0:12:30.10:0,30,647	0/0:22,0:17:6.02:0,6,70	0/0:10,0:8:3.01:0,3,36	0/0:38,0:38:82.13:0,82,1780	1/1:14,0:14:21.07:323,21,0	1/1:17,0:17:21.03:284,21,0	0/1:20,0:20:39.44:41,0,39	1/1:15,0:15:33.11:508,33,0	0/0:21,0:21:44.94:0,45,934	0/0:16,0:16:39.13:0,39,862	0/0:15,0:15:39.13:0,39,858	1/1:10,0:10:18.53:283,19,0	1/1:8,0:8:24.08:371,24,0	1/1:17,0:17:48.11:684,48,0	0/0:10,0:10:24.08:0,24,469	1/1:7,10:16:36.05:543,36,0	1/1:11,7:17:34.67:458,35,0	1/1:21,0:21:6.22:206,6,0	0/1:24,0:24:19.47:310,0,19	1/1:3,0:3:3:28,3,0	1/1:19,0:19:30.09:445,30,0	1/1:18,0:18:33.66:546,34,0	1/1:12,0:12:24.03:335,24,0	1/1:32,0:32:72.21:1107,72,0	1/1:6,18:24:57.14:844,57,0	0/1:15,0:15:21.44:141,0,21	1/1:21,3:24:30.08:408,30,0
chr10	102516996	.	TTTG	T	4844.53	PASS	AB=0.889;AC=26;AF=0.464;AN=56;BaseQRankSum=15.080;DP=492;FS=18.469;HRun=0;HaplotypeScore=145.5752;InbreedingCoeff=0.1575;MQ=63.13;MQ0=3;MQRankSum=-7.706;QD=14.86;ReadPosRankSum=5.986;VQSLOD=3.3172;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.14:0,72,1178	0/0:12,0:12:36.08:0,36,681	0/0:22,0:17:3.85:0,4,261	0/0:10,0:8:4.43:0,4,89	0/0:38,0:38:99:0,100,1898	0/1:8,5:13:28.88:225,0,29	0/1:14,3:17:51.11:204,0,51	0/1:22,0:20:38.99:39,0,73	1/1:6,8:14:28.54:350,29,0	0/0:20,0:20:59.95:0,60,1041	0/0:15,0:15:42.14:0,42,853	0/0:15,0:15:45.14:0,45,843	0/1:5,5:10:0.19:185,0,0	1/1:2,6:8:24.07:287,24,0	1/1:8,9:17:38.64:497,39,0	0/0:10,0:10:24.07:0,24,437	0/1:17,0:16:39.80:182,0,40	0/1:18,0:17:55.11:151,0,55	0/1:20,0:20:5.26:184,0,5	1/1:24,0:24:5.80:330,6,0	1/1:3,0:3:3:27,3,0	0/1:11,7:18:35.29:301,0,35	1/1:8,10:18:29.61:412,30,0	0/1:7,5:12:1.23:204,0,1	1/1:13,19:32:16.94:729,17,0	0/1:24,0:24:66.11:306,0,66	0/1:15,0:15:6.29:138,0,6	0/1:24,0:24:95.67:96,0,269
chr10	102516998	.	TGTTTGTTTG	T	4455.05	PASS	AB=0.977;AC=12;AF=0.214;AN=56;BaseQRankSum=4.855;DP=479;FS=0.454;HRun=0;HaplotypeScore=204.1328;InbreedingCoeff=0.5019;MQ=59.64;MQ0=3;MQRankSum=-6.698;QD=35.36;ReadPosRankSum=-3.155;VQSLOD=4.0153;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.25:0,75,2403	0/0:12,0:12:36.10:0,36,1428	0/1:18,0:13:33.26:33,0,401	0/1:9,0:8:30.40:30,0,124	0/0:38,0:38:98.24:0,98,4052	0/0:12,0:12:36.11:0,36,488	0/0:17,0:17:48.07:0,48,741	0/1:22,0:20:98.90:586,0,99	0/0:14,0:14:22.17:0,22,517	0/0:21,0:21:63.21:0,63,2349	0/0:15,0:15:42.14:0,42,1818	0/0:15,0:15:45.15:0,45,1755	0/0:10,0:10:27:0,27,420	0/0:8,0:8:24.08:0,24,366	0/0:17,0:17:51.09:0,51,784	0/0:8,0:8:24.08:0,24,970	0/0:17,0:16:2.58:0,3,562	0/1:16,0:15:67.86:68,0,501	1/1:3,16:20:60.01:1183,60,0	1/1:11,13:24:69.21:1683,69,0	1/1:0,2:2:3.01:97,3,0	0/0:17,0:17:51.13:0,51,709	0/0:17,0:17:51.16:0,51,770	0/0:12,0:12:33.10:0,33,464	0/0:32,0:32:93.26:0,93,1404	0/0:24,0:24:72.22:0,72,1020	1/1:3,11:14:27.09:774,27,0	0/0:22,0:22:66.21:0,66,1060
chr10	102517045	.	GT	G	1585.03	PASS	AB=0.861;AC=21;AF=0.375;AN=56;BaseQRankSum=11.247;DP=527;FS=5.867;HRun=8;HaplotypeScore=178.2313;InbreedingCoeff=0.7312;MQ=43.04;MQ0=22;MQRankSum=-12.578;QD=9.55;ReadPosRankSum=2.341;VQSLOD=0.7775;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:69.16:0,69,798	0/0:9,0:9:27.06:0,27,312	0/0:39,0:3:3:0,3,32	0/0:47,0:6:4.06:0,4,17	0/0:35,0:35:74.69:0,75,1051	1/1:1,7:8:19.70:101,20,0	1/1:3,10:11:31.64:217,32,0	0/0:20,0:17:1.65:0,2,32	1/1:3,11:14:30.17:145,30,0	0/0:18,0:18:41.44:0,41,443	0/0:22,0:20:54.12:0,54,612	0/0:13,0:13:33.10:0,33,390	1/1:0,10:10:28.32:164,28,0	1/1:1,8:9:22.39:125,22,0	1/1:2,11:13:13.98:159,14,0	0/0:11,0:10:15.36:0,15,296	0/0:22,0:21:49.20:0,49,533	0/0:20,0:19:42.36:0,42,401	0/0:15,0:20:6.04:0,6,57	0/1:20,0:26:4.80:5,0,62	0/1:4,0:4:3.02:7,0,3	1/1:2,10:12:28.15:167,28,0	1/1:4,16:19:40.81:220,41,0	0/1:2,5:7:4.16:68,0,4	1/1:2,27:29:75.09:410,75,0	0/0:31,0:30:80.18:0,80,903	0/0:9,0:15:4.73:0,5,54	0/0:7,0:7:20.73:0,21,216
chr10	102517051	.	TTTG	T	2486.65	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=11.456;DP=528;FS=0.000;HRun=0;HaplotypeScore=195.7831;InbreedingCoeff=0.5125;MQ=41.06;MQ0=20;MQRankSum=-11.871;QD=9.28;ReadPosRankSum=-1.824;VQSLOD=2.8100;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:63.87:0,64,1078	0/0:10,0:10:4.08:0,4,430	0/0:38,0:3:4.46:0,4,19	0/1:43,0:4:2.83:3,0,12	0/0:36,0:36:97.43:0,97,1615	1/1:8,0:8:7.69:45,8,0	0/1:14,0:12:16.53:40,0,17	1/1:8,9:15:19.58:279,20,0	0/1:16,0:16:20.18:46,0,20	0/0:19,0:19:43.88:0,44,680	0/0:25,0:22:56.16:0,56,905	0/0:12,0:12:32.91:0,33,532	1/1:13,0:13:8.66:47,9,0	0/1:11,0:11:12.67:63,0,13	1/1:12,0:12:6.04:76,6,0	0/0:12,0:10:29.30:0,29,454	0/0:21,0:20:22.13:0,22,418	0/0:20,0:18:16.16:0,16,316	1/1:14,7:21:58.87:661,59,0	1/1:22,6:28:48.24:703,48,0	1/1:5,0:4:5.98:49,6,0	1/1:12,0:11:14.14:92,14,0	0/1:18,0:17:13.59:53,0,14	1/1:7,0:7:10.57:49,11,0	0/1:28,0:28:9.07:129,0,9	0/0:31,0:30:72.86:0,73,1168	1/1:13,2:15:20.58:352,21,0	0/0:7,0:7:20.28:0,20,320
chr10	102517054	.	GTTTTT	G	2763.69	PASS	AB=0.975;AC=27;AF=0.482;AN=56;BaseQRankSum=10.661;DP=522;FS=11.385;HRun=10;HaplotypeScore=208.5954;InbreedingCoeff=0.4872;MQ=39.97;MQ0=26;MQRankSum=-11.470;QD=9.00;ReadPosRankSum=2.022;VQSLOD=-0.1835;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:51.90:0,52,1459	0/0:10,0:9:25.64:0,26,594	0/1:38,0:4:0.74:1,0,10	0/1:41,0:4:3.78:4,0,7	0/0:36,0:36:99:0,102,2490	1/1:7,1:8:6.60:172,7,0	1/1:14,0:12:28.93:257,29,0	0/1:21,0:18:31.94:71,0,32	1/1:11,2:13:5.87:210,6,0	0/0:20,0:19:47.84:0,48,1171	0/0:23,0:20:53.02:0,53,1418	0/0:11,0:11:30.10:0,30,828	1/1:12,1:13:3.89:219,4,0	0/1:9,2:11:28.53:148,0,29	1/1:10,2:12:25.56:258,26,0	0/0:11,0:9:27.09:0,27,660	0/0:12,0:18:41.12:0,41,570	0/0:15,0:18:13.84:0,14,576	1/1:21,0:20:2.50:147,2,0	0/1:26,0:26:89.60:136,0,90	0/1:5,0:3:8.37:8,0,15	1/1:10,2:11:25.89:232,26,0	1/1:16,3:18:25.53:285,26,0	1/1:7,0:7:14.89:121,15,0	1/1:24,5:28:63.33:639,63,0	0/0:29,0:28:36.77:0,37,1207	0/1:16,0:15:47.84:54,0,48	0/0:7,0:7:20.28:0,20,396
chr10	102517058	.	T	TTG	1709.95	PASS	AB=0.983;AC=18;AF=0.321;AN=56;BaseQRankSum=5.314;DP=530;FS=0.430;HRun=0;HaplotypeScore=192.5101;InbreedingCoeff=0.1865;MQ=38.46;MQ0=27;MQRankSum=-7.083;QD=6.22;ReadPosRankSum=-2.939;VQSLOD=2.9584;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:62.98:0,63,888	0/0:11,0:10:27.09:0,27,393	0/1:37,0:3:11.37:12,0,11	0/1:41,0:5:13.18:13,0,23	0/0:38,0:38:99:0,105,1465	0/0:8,0:8:18.30:0,18,70	0/1:15,0:13:41.53:43,0,42	0/1:24,0:19:25.39:135,0,25	0/0:13,0:13:15.67:0,16,70	0/0:21,0:20:52.45:0,52,677	0/0:23,0:20:57.18:0,57,827	0/0:11,0:11:30.10:0,30,447	0/1:13,0:13:25.41:25,0,58	0/0:12,0:12:19.31:0,19,102	0/1:12,0:12:7.72:8,0,66	0/0:12,0:10:30.07:0,30,391	1/1:21,0:19:7.72:217,8,0	0/1:20,0:18:30.55:163,0,31	1/1:16,4:20:20.95:443,21,0	1/1:14,6:25:9.80:490,10,0	0/1:4,1:3:7.90:44,0,8	0/0:10,0:10:16.46:0,16,78	0/1:17,0:16:13.81:14,0,71	0/1:7,0:7:5.02:5,0,38	0/0:30,0:29:5.11:0,5,136	0/0:27,0:26:51.63:0,52,953	1/1:9,3:15:14.83:274,15,0	0/0:8,0:8:22.96:0,23,291
chr10	102517059	.	T	TG	2225.86	PASS	AB=0.896;AC=24;AF=0.429;AN=56;BaseQRankSum=10.294;DP=524;FS=11.312;HRun=0;HaplotypeScore=178.3824;InbreedingCoeff=0.3245;MQ=38.41;MQ0=27;MQRankSum=-12.393;QD=7.37;ReadPosRankSum=-0.033;VQSLOD=2.5617;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:30.92:0,31,775	0/0:11,0:10:30.08:0,30,387	0/1:37,0:3:8.82:12,0,9	0/1:41,0:5:2.04:2,0,20	0/0:39,0:39:99:0,108,1387	1/1:2,6:8:3.71:143,4,0	0/1:7,8:13:7.76:246,0,8	0/1:23,0:18:43.16:43,0,72	1/1:4,9:13:4.75:200,5,0	0/0:20,0:19:52.85:0,53,627	0/0:23,0:20:56.61:0,57,731	0/0:10,0:10:30.10:0,30,411	0/1:5,8:13:22.73:177,0,23	0/1:6,5:11:39.84:108,0,40	1/1:5,7:12:10.10:195,10,0	0/0:12,0:10:30.02:0,30,350	0/0:20,0:18:34.89:0,35,220	0/0:20,0:18:27.97:0,28,204	0/1:19,0:17:2.23:107,0,2	0/1:25,0:25:18.57:93,0,19	0/1:5,0:3:3.28:9,0,3	1/1:4,7:10:22.23:153,22,0	1/1:6,10:15:21.08:250,21,0	1/1:4,3:7:11.57:112,12,0	1/1:9,21:29:41.27:506,41,0	0/0:27,1:27:32.94:0,33,289	0/1:16,0:15:7.36:56,0,7	0/0:8,0:8:7.07:0,7,92
chr10	102517068	.	TTTG	T	531.18	PASS	AB=0.993;AC=12;AF=0.214;AN=56;BaseQRankSum=9.408;DP=517;FS=1.520;HRun=0;HaplotypeScore=196.7572;InbreedingCoeff=0.3556;MQ=38.14;MQ0=31;MQRankSum=-5.724;QD=3.79;ReadPosRankSum=-0.512;VQSLOD=2.3737;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:40.23:0,40,600	0/0:10,0:9:26.58:0,27,300	0/0:31,0:3:8.55:0,9,54	0/0:32,0:4:6.61:0,7,23	0/0:37,0:37:98.65:0,99,1501	0/0:10,0:10:15.92:0,16,122	0/0:13,0:10:20.38:0,20,141	0/1:23,1:19:38.85:84,0,39	0/0:13,0:13:11.94:0,12,96	0/0:22,0:20:35.50:0,35,777	0/0:24,0:21:30.52:0,31,790	0/0:11,0:10:29.93:0,30,398	0/0:15,0:15:24.06:0,24,147	0/0:12,0:12:11.83:0,12,128	0/1:11,0:11:1.94:2,0,53	0/0:13,0:10:15.86:0,16,291	0/0:23,0:21:17.07:0,17,487	0/1:20,0:18:18.60:19,0,358	1/1:17,1:16:13.50:141,14,0	1/1:23,2:24:32.35:269,32,0	1/1:6,0:3:6.27:35,6,0	0/1:11,0:10:0.03:0,0,44	0/0:14,0:13:17.43:0,17,93	0/1:6,0:6:13.75:14,0,45	0/0:26,0:25:16.70:0,17,165	0/0:31,0:29:74.23:0,74,1097	0/1:19,0:18:45.31:121,0,45	0/0:10,0:9:24:0,24,375
chr10	102517071	.	GT	G	433.73	PASS	AB=0.818;AC=17;AF=0.304;AN=56;BaseQRankSum=9.047;DP=486;FS=0.472;HRun=12;HaplotypeScore=169.3529;InbreedingCoeff=0.0443;MQ=39.09;MQ0=32;MQRankSum=-7.490;QD=2.44;ReadPosRankSum=0.640;VQSLOD=0.3499;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,1:27:26.17:0,26,215	0/1:10,0:10:6.01:6,0,106	0/0:25,0:3:5.94:0,6,43	0/0:28,0:3:2.59:0,3,10	0/0:35,2:37:42.92:0,43,732	0/1:6,3:10:12.56:42,0,13	0/1:12,1:10:11.36:11,0,31	0/0:18,0:13:5.22:0,5,51	1/1:8,3:13:6.45:70,6,0	0/0:20,1:20:25.92:0,26,407	0/0:21,2:21:29.87:0,30,428	0/0:11,0:10:21.01:0,21,199	0/1:7,7:15:2.45:132,0,2	0/1:6,4:12:11.89:80,0,12	0/1:7,1:10:6.13:46,0,6	0/1:13,0:10:13.69:14,0,135	0/0:23,0:21:37.87:0,38,351	0/0:19,1:18:36.22:0,36,284	0/0:15,0:13:11.87:0,12,64	0/1:21,0:21:26.81:27,0,30	1/1:6,0:3:2.66:7,3,0	1/1:7,1:9:3.74:51,4,0	0/1:8,1:12:13.29:23,0,13	0/1:4,1:6:4.38:24,0,4	0/1:19,1:23:17.18:56,0,17	0/0:27,0:29:41.65:0,42,575	0/0:17,0:16:2.93:0,3,33	0/0:9,0:8:20.94:0,21,179
chr10	102517075	.	T	TTTG	2500.97	PASS	AB=0.905;AC=14;AF=0.250;AN=56;BaseQRankSum=4.516;DP=479;FS=6.526;HRun=0;HaplotypeScore=176.6075;InbreedingCoeff=-0.3224;MQ=39.59;MQ0=33;MQRankSum=-7.456;QD=12.38;ReadPosRankSum=-2.379;VQSLOD=2.6747;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:59.19:0,59,349	0/0:8,0:7:21.04:0,21,267	0/0:21,0:3:8.43:0,8,44	0/0:25,0:2:2.44:0,2,11	0/0:37,0:37:92.52:0,93,1386	0/1:9,1:10:28.46:198,0,28	0/1:11,2:10:31.20:222,0,31	0/1:17,2:14:39.41:164,0,39	0/1:11,1:12:61.42:188,0,61	0/0:24,0:21:58.70:0,59,786	0/0:23,0:21:56.71:0,57,767	0/0:11,0:10:27.07:0,27,352	0/1:14,1:15:99:200,0,103	0/1:11,0:11:60.05:60,0,81	0/1:8,3:11:50.10:232,0,50	0/0:13,0:10:27.32:0,27,323	0/0:22,0:20:51.91:0,52,644	0/0:21,0:20:28.48:0,28,455	0/1:15,0:13:63.76:64,0,65	0/1:21,0:20:69.50:70,0,131	0/0:6,0:3:3.73:0,4,16	0/1:8,2:9:16.66:231,0,17	0/1:14,2:16:48.34:304,0,48	0/1:4,2:6:6.93:152,0,7	0/1:22,4:24:62.31:511,0,62	0/0:27,0:26:71.72:0,72,1017	0/1:17,0:16:58.38:58,0,159	0/0:9,0:8:23.93:0,24,344
chr10	102517080	.	TTTTG	T	2988.25	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=9.336;DP=482;FS=3.616;HRun=0;HaplotypeScore=180.1709;InbreedingCoeff=0.6544;MQ=40.30;MQ0=30;MQRankSum=-8.929;QD=13.22;ReadPosRankSum=-1.817;VQSLOD=3.2949;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:17.75:0,18,446	0/0:7,0:5:15.05:0,15,286	0/0:13,0:2:2.69:0,3,12	0/0:23,0:2:2.74:0,3,12	0/0:37,0:37:85.77:0,86,1453	1/1:10,2:12:29.04:260,29,0	1/1:13,1:11:8.64:159,9,0	1/1:21,0:16:7.63:131,8,0	1/1:8,3:11:28.46:289,28,0	0/0:23,0:20:54.66:0,55,842	0/0:22,0:21:31.36:0,31,770	0/0:11,0:10:23.58:0,24,317	1/1:12,3:15:36.65:311,37,0	1/1:11,1:12:26.48:185,26,0	1/1:10,1:11:29.17:294,29,0	0/1:13,0:10:0.32:0,0,250	0/0:25,0:23:43.98:0,44,574	0/0:23,0:21:34.53:0,35,480	0/1:14,0:12:31:31,0,31	0/1:21,0:20:16.90:97,0,17	1/1:5,0:3:4.24:18,4,0	1/1:8,2:9:26.46:287,26,0	1/1:14,2:16:25.55:328,26,0	1/1:6,1:7:13.05:111,13,0	1/1:20,6:24:52.03:654,52,0	0/0:29,0:27:55.78:0,56,925	0/1:18,0:17:30.77:39,0,31	0/0:11,0:10:16.14:0,16,177
chr10	102517083	.	TG	T	2101.04	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=11.529;DP=463;FS=2.913;HRun=1;HaplotypeScore=151.8011;InbreedingCoeff=0.7931;MQ=41.03;MQ0=29;MQRankSum=-8.640;QD=8.58;ReadPosRankSum=-1.519;VQSLOD=0.6362;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:29:0.44:0,0,145	0/0:7,0:5:13.58:0,14,132	0/0:10,0:2:2.69:0,3,17	0/0:15,4:3:1.53:0,2,13	0/0:36,1:37:46.34:0,46,698	1/1:12,0:12:25.61:153,26,0	1/1:11,0:9:13.06:78,13,0	1/1:16,3:14:23.18:115,23,0	1/1:10,0:10:24.32:145,24,0	0/0:24,0:21:40.91:0,41,464	0/0:22,0:21:17.73:0,18,398	0/0:9,0:8:22.29:0,22,155	1/1:13,0:13:37.85:242,38,0	1/1:10,0:10:28.21:159,28,0	1/1:11,0:11:22.36:127,22,0	0/1:13,0:11:33.14:33,0,107	0/0:26,0:24:26.41:0,26,359	0/0:24,0:22:25.59:0,26,272	1/1:12,0:10:23.21:103,23,0	1/1:21,1:21:56.02:279,56,0	1/1:6,0:3:7.02:34,7,0	1/1:10,0:9:22.10:147,22,0	1/1:16,0:16:34.08:183,34,0	1/1:7,0:7:7.86:37,8,0	1/1:26,0:24:47.90:287,48,0	0/0:29,0:27:59.36:0,59,557	1/1:16,0:15:38.31:187,38,0	0/0:10,0:9:9.09:0,9,134
chr10	102517084	.	GT	G	2259.57	PASS	AB=0.749;AC=23;AF=0.411;AN=56;BaseQRankSum=8.343;DP=458;FS=8.905;HRun=12;HaplotypeScore=148.8801;InbreedingCoeff=0.3975;MQ=41.02;MQ0=28;MQRankSum=-7.172;QD=11.30;ReadPosRankSum=2.180;VQSLOD=1.7614;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:53.79:0,54,590	0/0:7,0:5:15.04:0,15,186	0/0:10,0:2:2.73:0,3,14	0/0:18,0:3:2.90:0,3,16	0/0:35,0:35:46.76:0,47,884	1/1:5,7:12:8.76:185,9,0	0/1:6,4:9:16.92:95,0,17	0/1:12,7:14:11.42:141,0,11	1/1:6,4:10:6.19:153,6,0	0/0:24,0:21:56.72:0,57,676	0/0:19,0:19:53.37:0,53,592	0/0:9,0:8:20.11:0,20,209	1/1:5,8:13:32.48:279,32,0	1/1:5,5:10:28.67:244,29,0	0/1:8,3:11:0.14:121,0,0	0/0:13,0:11:16.30:0,16,233	0/0:26,0:24:62.69:0,63,637	0/0:24,0:22:30.78:0,31,494	0/1:8,4:10:14.90:110,0,15	0/1:14,7:20:5.86:260,0,6	1/1:6,0:3:0.12:18,0,0	1/1:9,1:9:1.14:92,1,0	1/1:10,6:16:1.19:150,1,0	0/1:4,2:7:21:43,0,21	0/1:18,8:24:1.87:261,0,2	0/0:28,0:26:69.11:0,69,817	1/1:8,8:15:27.50:286,28,0	0/0:10,0:9:17.94:0,18,184
chr10	102517098	.	GTTT	G	787.84	PASS	AB=0.860;AC=9;AF=0.161;AN=56;BaseQRankSum=-1.209;DP=446;FS=4.752;HRun=15;HaplotypeScore=146.5936;InbreedingCoeff=0.5641;MQ=45.99;MQ0=24;MQRankSum=-2.297;QD=6.25;ReadPosRankSum=-1.546;VQSLOD=0.3346;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:30:32.55:0,33,411	0/0:8,0:7:16.30:0,16,269	0/0:21,0:3:2.92:0,3,17	0/0:11,0:4:3.23:0,3,21	0/0:27,0:34:74.97:0,75,1136	0/0:10,0:10:18.88:0,19,186	0/0:14,0:13:30.07:0,30,350	0/1:18,0:15:1.22:17,0,1	0/0:13,0:13:26.74:0,27,279	0/0:20,0:19:42.79:0,43,495	0/0:20,0:20:39.19:0,39,438	0/0:6,0:7:15:0,15,159	0/0:12,0:12:24.55:0,25,220	0/0:11,0:11:26.14:0,26,273	0/0:8,0:8:18.16:0,18,172	0/0:11,0:9:18.01:0,18,233	1/1:17,9:25:49.87:425,50,0	0/1:12,15:25:21.34:249,0,21	0/0:12,0:10:13.94:0,14,74	0/1:16,0:16:10.93:11,0,110	0/0:3,0:2:2.97:0,3,20	0/0:13,0:12:21.96:0,22,227	0/0:14,0:14:23.30:0,23,238	0/0:6,0:6:12.04:0,12,150	0/0:22,0:21:31.33:0,31,314	1/1:21,0:24:19.87:155,20,0	0/0:14,0:14:21.77:0,22,101	1/1:10,0:8:14.62:85,15,0
chr10	102517103	.	T	TTGG	224.26	PASS	AB=0.800;AC=2;AF=0.036;AN=56;BaseQRankSum=0.143;DP=462;FS=2.096;HRun=0;HaplotypeScore=157.6129;InbreedingCoeff=-0.0477;MQ=49.11;MQ0=23;MQRankSum=-2.708;QD=5.47;ReadPosRankSum=-0.437;VQSLOD=2.6441;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:40.50:0,40,552	0/0:9,0:7:21.07:0,21,335	0/0:25,0:5:8.43:0,8,51	0/0:12,0:5:2.05:0,2,20	0/0:34,0:34:86.81:0,87,1275	0/0:10,0:10:25.37:0,25,372	0/0:14,0:13:32.85:0,33,520	0/0:17,0:15:14.47:0,14,106	0/0:15,0:15:38.60:0,39,581	0/0:21,0:18:54.09:0,54,721	0/0:19,0:18:51.14:0,51,722	0/0:8,0:7:21.06:0,21,290	0/0:14,0:14:35.43:0,35,522	0/0:12,0:12:35.95:0,36,554	0/0:10,0:10:29.89:0,30,455	0/0:10,0:8:24.08:0,24,360	0/0:27,0:25:40.16:0,40,588	0/0:27,0:24:23.83:0,24,456	0/0:13,0:12:15.34:0,15,89	0/0:17,0:16:14.96:0,15,103	0/0:5,0:4:4.71:0,5,38	0/0:15,0:14:38.75:0,39,527	0/0:15,0:15:35.57:0,36,474	0/0:7,0:7:17.85:0,18,277	0/0:22,0:21:55.87:0,56,720	0/1:24,3:25:99:238,0,351	0/0:15,0:15:15.24:0,15,82	0/1:8,4:12:22.82:75,0,23
chr10	102517649	.	TA	T	5827.70	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=7.701;DP=569;FS=3.391;HRun=11;HaplotypeScore=62.5264;InbreedingCoeff=0.8932;MQ=66.48;MQ0=0;MQRankSum=-0.371;QD=19.30;ReadPosRankSum=-2.622;VQSLOD=5.0899;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:33,2:35:71.46:0,71,930	0/0:13,0:13:36.06:0,36,373	0/0:13,0:9:10.70:0,11,80	0/1:10,0:9:12.58:13,0,50	0/0:34,0:35:92.89:0,93,949	1/1:0,18:19:49.98:400,50,0	1/1:1,16:18:43.98:351,44,0	1/1:2,28:31:85.93:695,86,0	1/1:3,15:18:41.95:345,42,0	0/0:25,0:26:62.98:0,63,647	0/0:22,0:22:60.14:0,60,633	0/0:15,0:15:42.11:0,42,448	1/1:2,16:18:38.93:320,39,0	1/1:2,12:14:32.94:271,33,0	1/1:3,11:14:26.96:222,27,0	0/0:15,0:15:38.93:0,39,398	0/0:4,0:26:62.59:0,63,315	0/0:5,0:20:37.17:0,37,193	1/1:3,11:14:0.97:214,1,0	1/1:6,25:31:45.91:584,46,0	1/1:3,10:13:29.96:246,30,0	1/1:1,27:28:80.90:665,81,0	1/1:1,14:15:38.95:320,39,0	1/1:1,10:11:23.97:197,24,0	1/1:3,21:24:53.93:443,54,0	0/0:35,0:35:90.04:0,90,929	1/1:2,22:24:65.92:542,66,0	0/0:10,0:10:24.05:0,24,248
chr10	102519629	.	T	TCCCACCCC	32356.77	PASS	AB=0.552;AC=37;AF=0.661;AN=56;BaseQRankSum=15.557;DP=578;FS=11.484;HRun=0;HaplotypeScore=173.0379;InbreedingCoeff=0.9167;MQ=80.75;MQ0=0;MQRankSum=-17.431;QD=88.17;ReadPosRankSum=-1.689;VQSLOD=4.6088;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,3762	0/0:7,0:7:21.07:0,21,615	0/0:31,0:31:93.22:0,93,2303	0/0:15,0:15:36.12:0,36,1011	0/0:24,0:24:66.23:0,66,1859	1/1:4,13:21:60.12:2054,60,0	1/1:1,10:19:45.15:1581,45,0	1/1:12,8:33:87.20:2211,87,0	1/1:3,15:21:57.20:2255,57,0	0/0:22,0:22:66.17:0,66,1693	0/0:23,0:23:69.22:0,69,1841	0/0:19,0:19:54.19:0,54,1556	1/1:3,14:17:51.18:2017,51,0	1/1:0,13:21:51.18:1967,51,0	1/1:3,17:22:57.20:2346,57,0	0/0:23,0:23:69.22:0,69,1912	1/1:3,14:20:57.17:1943,57,0	1/1:2,2:6:15.05:450,15,0	1/1:6,6:17:45.15:1379,45,0	1/1:4,10:18:42.14:1362,42,0	1/1:6,7:17:30.10:1067,30,0	1/1:2,13:19:54.19:2047,54,0	1/1:6,14:24:55.43:2075,55,0	1/1:8,8:25:45.10:1242,45,0	1/1:3,13:20:60.19:2004,60,0	0/1:3,13:16:39.72:1745,0,40	1/1:0,13:19:45.15:1867,45,0	1/1:5,5:11:21.07:745,21,0
chr10	102519631	.	T	TC	10301.03	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=18.021;DP=571;FS=0.000;HRun=1;HaplotypeScore=181.3890;InbreedingCoeff=0.8303;MQ=83.27;MQ0=0;MQRankSum=-17.745;QD=28.85;ReadPosRankSum=2.348;VQSLOD=4.5899;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,1906	0/0:7,0:7:21.07:0,21,294	0/0:34,0:34:96.29:0,96,1308	0/0:15,0:15:36.12:0,36,498	0/0:25,0:25:69.23:0,69,960	1/1:21,1:21:44.97:696,45,0	1/1:17,0:17:42.14:558,42,0	0/1:31,0:31:29.10:786,0,29	1/1:21,0:21:47.35:689,47,0	0/0:22,0:22:63.20:0,63,864	0/0:22,0:22:66.22:0,66,914	0/0:19,0:19:57.19:0,57,793	1/1:17,0:17:44.62:631,45,0	1/1:20,0:21:51.07:639,51,0	1/1:22,0:22:56.20:712,56,0	0/0:23,0:23:69.23:0,69,963	1/1:20,0:20:37.45:630,37,0	1/1:6,0:6:7.64:160,8,0	1/1:17,0:17:18.82:479,19,0	1/1:17,0:17:28.42:417,28,0	1/1:16,0:16:21.35:311,21,0	1/1:20,0:20:47.69:675,48,0	1/1:23,0:23:32.97:638,33,0	1/1:22,0:22:14.62:364,15,0	1/1:20,0:20:32.56:570,33,0	0/1:17,0:17:15.42:484,0,15	1/1:19,0:19:45.15:588,45,0	1/1:6,3:9:21.07:274,21,0
chr10	102519632	.	AC	A	6417.62	PASS	AB=0.614;AC=31;AF=0.554;AN=56;BaseQRankSum=17.150;DP=573;FS=36.852;HRun=5;HaplotypeScore=194.7683;InbreedingCoeff=0.4752;MQ=82.24;MQ0=0;MQRankSum=-14.468;QD=17.83;ReadPosRankSum=3.145;VQSLOD=1.6093;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,1795	0/0:8,0:8:21.07:0,21,287	0/0:33,0:33:96.31:0,96,1296	0/0:14,0:14:39.04:0,39,481	0/0:25,0:25:69.21:0,69,927	1/1:9,14:23:14.76:403,15,0	1/1:8,10:18:13.15:278,13,0	0/1:13,18:31:99:464,0,154	1/1:2,19:21:30:448,30,0	0/0:22,0:22:54.17:0,54,726	0/0:22,0:22:63.19:0,63,830	0/0:19,0:19:54.18:0,54,739	1/1:2,15:17:44.80:407,45,0	0/1:8,13:21:14.46:316,0,14	1/1:2,20:22:37.51:481,38,0	0/0:23,0:23:66.22:0,66,902	0/1:4,17:21:10.66:398,0,11	0/1:2,4:6:27.78:79,0,28	0/1:7,10:17:10.27:263,0,10	1/1:5,13:18:21.02:258,21,0	1/1:8,8:16:22.77:176,23,0	0/1:7,13:20:27.23:371,0,27	1/1:7,16:23:49.64:455,50,0	0/1:10,11:21:13.58:226,0,14	1/1:5,15:20:47.42:471,47,0	1/1:1,16:17:7.04:404,7,0	1/1:6,13:19:37.45:387,37,0	1/1:4,5:9:4.63:133,5,0
chr10	102519953	.	GT	G	12214.39	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=17.431;DP=620;FS=1.034;HRun=3;HaplotypeScore=161.2957;InbreedingCoeff=0.9626;MQ=80.60;MQ0=0;MQRankSum=-9.638;QD=29.86;ReadPosRankSum=2.269;VQSLOD=4.1466;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,2030	0/0:8,0:8:21.07:0,21,302	0/0:22,0:22:60.14:0,60,798	0/0:20,0:20:47.91:0,48,588	0/0:24,0:24:66.22:0,66,950	1/1:2,17:19:39.12:481,39,0	1/1:3,25:28:75.18:910,75,0	1/1:0,20:20:60.15:716,60,0	1/1:1,23:24:60.19:741,60,0	0/0:23,0:23:66.22:0,66,950	0/0:18,0:18:54.18:0,54,778	0/0:24,0:24:69.23:0,69,994	1/1:2,32:34:84.23:1021,84,0	1/1:2,29:31:84.26:1039,84,0	1/1:0,26:26:72.23:891,72,0	0/0:25,0:25:72.23:0,72,1019	1/1:1,28:27:66.21:816,66,0	1/1:1,14:14:36.07:428,36,0	1/1:0,9:9:27.08:334,27,0	1/1:0,19:19:45.14:557,45,0	1/1:3,32:35:72.14:872,72,0	1/1:1,12:13:30.09:371,30,0	1/1:2,13:15:15.05:186,15,0	1/1:1,23:24:59.79:742,60,0	1/1:1,16:17:36.11:446,36,0	1/1:2,15:17:1.93:477,2,0	1/1:1,27:28:81.25:999,81,0	1/1:0,6:6:15.05:186,15,0
chr10	102520000	.	G	GA	4704.56	PASS	AB=0.665;AC=33;AF=0.589;AN=56;BaseQRankSum=17.112;DP=599;FS=2.818;HRun=1;HaplotypeScore=185.3279;InbreedingCoeff=0.6012;MQ=79.10;MQ0=0;MQRankSum=-15.120;QD=11.76;ReadPosRankSum=5.269;VQSLOD=3.7335;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,1489	0/0:12,0:12:36.12:0,36,495	0/0:27,0:27:74.96:0,75,918	0/0:17,0:17:51.16:0,51,679	0/0:14,0:14:42.13:0,42,566	1/1:9,12:21:36.73:252,37,0	1/1:13,20:33:62.41:447,62,0	0/1:17,11:28:99:202,0,130	1/1:8,11:19:20.75:197,21,0	0/0:24,0:24:72.23:0,72,986	0/0:13,0:13:39.11:0,39,524	0/0:28,0:28:78.24:0,78,1072	1/1:10,21:31:25.79:431,26,0	1/1:10,19:29:17.99:357,18,0	1/1:11,21:32:30.78:443,31,0	0/0:25,0:25:75.25:0,75,1044	1/1:5,17:20:27.69:298,28,0	0/1:5,11:14:18.69:208,0,19	0/1:14,9:23:99:177,0,116	1/1:9,7:16:14.11:163,14,0	0/1:13,10:23:0.82:184,0,1	1/1:6,13:19:34.59:262,35,0	1/1:6,7:13:21.60:143,22,0	1/1:5,12:17:0.99:101,1,0	1/1:3,4:7:2.18:73,2,0	0/1:5,10:15:8.17:187,0,8	1/1:4,21:25:49.64:443,50,0	1/1:5,6:11:7.93:136,8,0
chr10	102520001	.	G	GAGA	11927.46	PASS	AB=0.718;AC=36;AF=0.643;AN=56;BaseQRankSum=15.118;DP=599;FS=13.224;HRun=0;HaplotypeScore=187.9003;InbreedingCoeff=0.8357;MQ=79.71;MQ0=0;MQRankSum=-15.956;QD=29.82;ReadPosRankSum=2.984;VQSLOD=4.3254;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,1936	0/0:13,0:13:36.08:0,36,627	0/0:28,0:28:78.16:0,78,1190	0/0:17,0:17:51.16:0,51,834	0/0:14,0:14:42.12:0,42,695	1/1:9,12:21:33.06:620,33,0	1/1:12,20:32:52.80:984,53,0	0/1:17,11:28:66.83:640,0,67	1/1:8,11:19:41.85:569,42,0	0/0:24,0:24:72.24:0,72,1270	0/0:13,0:13:39.11:0,39,667	0/0:27,0:27:78.26:0,78,1406	1/1:10,21:31:22.03:982,22,0	1/1:11,19:30:49.32:973,49,0	1/1:11,21:32:50.21:1136,50,0	0/0:25,0:25:75.25:0,75,1352	1/1:5,16:20:30.70:674,31,0	1/1:5,11:14:7.64:525,8,0	0/1:14,9:23:2.27:689,0,2	1/1:10,7:17:14.83:345,15,0	1/1:13,10:23:10.03:368,10,0	1/1:7,13:20:44.96:648,45,0	1/1:5,7:12:27.06:370,27,0	1/1:5,12:17:23.96:351,24,0	1/1:3,4:7:15.04:215,15,0	1/1:5,10:15:6.80:502,7,0	1/1:5,20:26:54.32:992,54,0	1/1:3,6:9:24.04:345,24,0
chr10	102520377	.	C	CCTTTT	1863.54	PASS	AB=0.972;AC=18;AF=0.321;AN=56;BaseQRankSum=9.944;DP=490;FS=16.498;HRun=0;HaplotypeScore=142.2092;InbreedingCoeff=-0.3044;MQ=70.04;MQ0=7;MQRankSum=-0.065;QD=6.45;ReadPosRankSum=-1.282;VQSLOD=1.4993;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:66.97:0,67,584	0/0:9,0:9:22.42:0,22,207	0/0:31,0:15:12.82:0,13,176	0/0:23,0:11:22.78:0,23,195	0/0:16,0:16:28.20:0,28,352	0/1:23,0:23:74.34:287,0,74	0/1:18,0:18:62.01:83,0,62	0/1:21,0:20:97.08:97,0,146	0/1:15,0:15:20.08:118,0,20	0/0:14,0:14:33.04:0,33,322	0/0:14,0:14:36.44:0,36,325	0/0:18,0:18:38.93:0,39,332	0/1:17,0:17:79.12:138,0,79	0/1:21,0:19:87.59:144,0,88	0/1:10,0:10:28.74:76,0,29	0/0:12,0:12:24.02:0,24,220	0/1:26,0:26:99:162,0,102	0/1:19,0:19:60.59:182,0,61	0/1:15,0:15:54.02:54,0,95	0/1:7,0:6:11.09:32,0,11	0/1:14,0:14:14.45:81,0,14	0/1:12,0:12:34.74:35,0,75	0/1:8,4:15:40.88:41,0,108	1/1:18,0:17:17.41:208,17,0	0/1:19,0:19:93.38:163,0,93	0/0:16,0:16:17.09:0,17,223	0/1:16,0:19:99:130,0,102	0/0:9,0:8:11.96:0,12,103
chr10	102520378	.	C	CTTT	5638.28	PASS	AB=0.954;AC=44;AF=0.786;AN=56;BaseQRankSum=-2.355;DP=550;FS=3.641;HRun=20;HaplotypeScore=129.9505;InbreedingCoeff=0.3867;MQ=67.35;MQ0=8;MQRankSum=-1.774;QD=11.32;ReadPosRankSum=-1.113;VQSLOD=0.2094;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:42:20:20,0,35	0/1:7,0:9:10.54:11,0,36	0/1:33,0:15:2.97:3,0,30	0/0:22,0:11:2.53:0,3,21	0/1:15,0:20:19.17:19,0,61	1/1:27,0:27:54.74:653,55,0	1/1:21,0:21:36:408,36,0	1/1:18,8:26:33.97:377,34,0	1/1:18,0:17:29.32:335,29,0	0/0:14,0:15:4.27:0,4,25	0/0:14,0:14:1.49:0,1,8	0/1:20,0:20:0:1,0,0	1/1:18,0:18:33.32:360,33,0	1/1:24,0:22:33.05:381,33,0	1/1:12,0:12:20.81:211,21,0	1/1:12,0:12:0.89:2,1,0	1/1:27,0:27:35.99:413,36,0	1/1:21,0:21:42.79:438,43,0	1/1:15,3:17:15.05:196,15,0	1/1:9,0:9:9.90:102,10,0	1/1:15,0:15:20.19:203,20,0	1/1:13,0:13:20.05:156,20,0	1/1:19,0:20:15.84:151,16,0	1/1:20,0:20:30.92:353,31,0	1/1:22,0:22:16.67:453,17,0	1/1:10,0:18:15.54:125,16,0	1/1:21,0:21:25.55:268,26,0	0/1:6,0:8:0.16:0,0,0
chr10	102520826	.	T	TC	857.49	PASS	AB=1.000;AC=21;AF=0.389;AN=54;BaseQRankSum=-3.601;DP=235;FS=19.755;HRun=8;HaplotypeScore=31.6937;InbreedingCoeff=0.7631;MQ=93.05;MQ0=0;MQRankSum=0.577;QD=10.85;ReadPosRankSum=0.962;VQSLOD=0.5434;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:39:0,39,356	0/0:5,0:5:11.99:0,12,104	0/0:11,1:11:23.79:0,24,196	0/1:16,0:14:8.41:8,0,96	0/0:8,0:8:5.72:0,6,54	1/1:1,5:6:6.02:69,6,0	1/1:6,8:14:15.04:173,15,0	0/0:16,0:16:36.01:0,36,329	1/1:2,5:7:12.51:139,13,0	./.	0/0:5,0:5:12.01:0,12,110	0/0:6,0:6:18.01:0,18,164	1/1:1,4:5:3.01:35,3,0	1/1:2,4:6:15.02:161,15,0	1/1:2,6:8:15.04:173,15,0	0/0:7,0:7:18:0,18,163	0/0:19,0:19:51.01:0,51,460	0/0:12,0:12:30:0,30,269	0/0:10,0:10:23.98:0,24,211	0/0:7,0:7:18:0,18,165	0/0:14,0:14:29.99:0,30,273	1/1:4,2:6:12:118,12,0	1/1:1,4:5:6.02:69,6,0	1/1:2,3:5:6.02:69,6,0	1/1:0,1:1:3.01:35,3,0	0/0:6,0:6:15.01:0,15,137	0/0:6,0:6:9:0,9,82	0/0:3,0:3:9:0,9,82
chr10	102521275	.	C	CT	1850.84	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.959;DP=665;FS=1.171;HRun=3;HaplotypeScore=65.6424;InbreedingCoeff=0.9978;MQ=77.47;MQ0=0;MQRankSum=-2.210;QD=31.37;ReadPosRankSum=2.538;VQSLOD=3.8170;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,159,1888	0/0:7,0:7:21.06:0,21,252	0/0:16,0:16:40.36:0,40,469	0/0:18,0:18:39.74:0,40,411	0/0:38,0:38:99:0,108,1270	0/0:15,0:15:45.07:0,45,510	0/0:23,0:23:63.07:0,63,710	0/0:18,0:18:54.12:0,54,594	0/0:24,0:24:69.20:0,69,816	0/0:23,0:23:60.17:0,60,704	0/0:22,0:22:63.16:0,63,732	0/0:22,0:22:60.17:0,60,710	0/0:29,0:29:87.27:0,87,1043	0/0:24,0:24:63.18:0,63,743	0/0:20,0:20:60.18:0,60,720	0/0:20,0:20:60.17:0,60,708	1/1:1,40:41:99:1427,102,0	1/1:0,18:18:39.13:545,39,0	0/0:18,0:18:51.16:0,51,612	0/0:28,0:28:81.24:0,81,960	0/0:28,0:28:81.20:0,81,934	0/0:19,0:19:54.17:0,54,647	0/0:18,0:18:51.15:0,51,602	0/0:30,0:30:78.13:0,78,881	0/0:23,0:23:69.20:0,69,811	0/0:24,0:24:72.22:0,72,864	0/0:31,0:31:87.26:0,87,1032	0/0:15,0:15:45.10:0,45,523
chr10	102521630	.	AC	A	2975.91	PASS	AB=0.538;AC=7;AF=0.125;AN=56;BaseQRankSum=14.114;DP=772;FS=0.420;HRun=2;HaplotypeScore=87.0816;InbreedingCoeff=0.8396;MQ=86.97;MQ0=0;MQRankSum=-3.341;QD=32.70;ReadPosRankSum=0.820;VQSLOD=3.4599;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:57:99:0,169,2495	0/0:11,0:11:33.11:0,33,494	0/0:27,0:27:81.27:0,81,1187	0/0:26,0:26:54.94:0,55,982	0/0:39,0:39:99:0,117,1732	0/0:31,0:31:93.29:0,93,1353	0/0:22,0:22:66.22:0,66,987	0/0:32,0:32:93.29:0,93,1356	0/0:29,0:29:87.29:0,87,1301	0/0:40,0:40:99:0,117,1754	0/0:33,0:33:99:0,99,1463	0/0:22,0:22:66.22:0,66,971	0/0:28,0:28:84.28:0,84,1255	0/0:18,0:18:54.17:0,54,789	0/0:35,0:35:99:0,105,1555	0/0:37,0:37:99:0,108,1597	1/1:0,38:38:99:1422,111,0	1/1:2,9:11:33.11:427,33,0	0/0:19,0:19:57.18:0,57,836	0/0:25,0:25:72.24:0,72,1079	0/0:35,0:35:99:0,102,1461	0/0:16,0:16:48.16:0,48,719	0/0:18,0:18:51.17:0,51,763	0/0:25,0:25:75.25:0,75,1124	0/0:24,0:23:72.22:0,72,1057	0/1:4,24:28:17.73:769,0,18	0/0:31,0:31:90.30:0,90,1349	1/1:0,14:14:39.13:506,39,0
chr10	102521723	.	T	TAC	4788.37	PASS	AB=0.735;AC=33;AF=0.589;AN=56;BaseQRankSum=14.491;DP=851;FS=0.602;HRun=0;HaplotypeScore=184.4203;InbreedingCoeff=0.7143;MQ=62.79;MQ0=7;MQRankSum=-1.188;QD=8.61;ReadPosRankSum=2.448;VQSLOD=4.6682;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:40:99:0,108,1281	0/0:9,0:9:21.07:0,21,258	0/0:43,0:18:32.48:0,32,345	0/0:38,0:23:34.94:0,35,341	0/0:33,0:33:81.25:0,81,995	1/1:35,0:35:26.32:72,26,0	1/1:27,0:27:12.14:50,12,0	1/1:45,0:45:9:54,9,0	0/1:31,0:31:16.64:33,0,17	0/0:27,0:27:60.19:0,60,737	0/0:32,0:32:84.23:0,84,1005	0/0:27,0:27:65:0,65,768	1/1:34,0:34:20.01:57,20,0	1/1:21,0:21:12.09:35,12,0	1/1:36,0:36:28.31:74,28,0	0/0:31,0:31:73.46:0,73,906	1/1:20,17:37:84.27:1275,84,0	0/1:5,29:34:4.59:958,0,5	0/0:14,0:14:5.41:0,5,22	1/1:42,0:42:1.93:37,2,0	1/1:30,0:30:8.99:39,9,0	1/1:25,0:25:15.02:45,15,0	1/1:21,0:21:21.18:51,21,0	1/1:35,0:35:27.84:71,28,0	1/1:23,0:23:7.29:26,7,0	0/1:16,16:32:34.87:948,0,35	1/1:24,0:24:26.16:63,26,0	1/1:10,14:24:57.19:900,57,0
chr10	102521735	.	C	CA	16665.89	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=3.185;DP=881;FS=1.992;HRun=1;HaplotypeScore=120.7637;InbreedingCoeff=0.9513;MQ=66.23;MQ0=19;MQRankSum=-1.521;QD=36.07;ReadPosRankSum=5.382;VQSLOD=4.4493;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,119,1495	0/0:9,0:9:27.07:0,27,334	0/0:47,0:19:51.16:0,51,634	0/0:51,0:30:66.58:0,67,836	0/0:29,0:29:87.28:0,87,1125	1/1:1,33:34:99:1435,99,0	1/1:0,26:26:69.23:993,69,0	1/1:1,42:40:99:1622,114,0	1/1:2,29:31:48.34:1187,48,0	0/0:25,0:25:69.22:0,69,892	0/0:31,0:31:90.29:0,90,1163	0/0:27,1:28:44.49:0,44,941	1/1:2,37:38:81.27:1190,81,0	1/1:1,21:22:51.17:748,51,0	1/1:0,38:36:93.27:1353,93,0	0/0:31,2:33:51.32:0,51,1139	0/0:38,0:38:20.59:0,21,197	0/0:33,0:33:1.06:0,1,132	1/1:2,17:19:54.18:725,54,0	1/1:1,43:44:99:1606,116,0	1/1:3,31:33:75.18:1076,75,0	1/1:1,25:25:69.23:1010,69,0	1/1:1,20:20:51.17:764,51,0	1/1:2,32:33:53.04:1172,53,0	1/1:1,21:22:53.85:751,54,0	0/0:33,0:33:31.49:0,31,376	1/1:1,27:28:69.23:1034,69,0	0/0:21,0:21:5.36:0,5,71
chr10	102522762	.	GGGGA	G	3804.09	PASS	AB=0.533;AC=29;AF=0.537;AN=54;BaseQRankSum=-8.083;DP=227;FS=15.470;HRun=0;HaplotypeScore=65.8897;InbreedingCoeff=0.7327;MQ=62.16;MQ0=0;MQRankSum=-2.125;QD=27.97;ReadPosRankSum=1.551;VQSLOD=1.9014;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:3.26:0,3,10	0/0:1,0:1:3:0,3,27	0/0:7,0:7:14.56:0,15,135	0/0:7,0:7:17.51:0,18,271	0/0:6,0:6:3:0,3,27	1/1:0,16:16:47.78:603,48,0	1/1:0,5:5:14.88:142,15,0	1/1:1,5:6:15:276,15,0	0/1:1,7:8:9.26:202,0,9	0/0:12,0:12:32.94:0,33,282	0/0:4,0:4:8.19:0,8,56	0/0:11,0:11:11.23:0,11,99	1/1:0,10:10:26.84:272,27,0	1/1:1,14:15:38.80:424,39,0	1/1:1,13:14:28.77:327,29,0	0/0:10,0:10:17.98:0,18,159	0/0:5,0:5:3:0,3,28	0/0:4,0:4:2.84:0,3,14	1/1:0,7:6:18.06:330,18,0	1/1:1,5:5:2.97:20,3,0	1/1:0,4:4:5.93:40,6,0	1/1:0,4:4:11.95:158,12,0	1/1:0,11:11:32.60:216,33,0	1/1:0,11:11:14.92:174,15,0	1/1:1,8:9:20.90:265,21,0	0/0:5,0:5:14.99:0,15,128	1/1:0,10:10:23.95:356,24,0	./.
chr10	102522764	.	G	GA	1224.11	PASS	AB=0.943;AC=27;AF=0.500;AN=54;BaseQRankSum=-2.408;DP=219;FS=9.268;HRun=0;HaplotypeScore=63.4701;InbreedingCoeff=0.3226;MQ=60.69;MQ0=0;MQRankSum=-0.485;QD=10.12;ReadPosRankSum=1.335;VQSLOD=3.0759;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:18:5.95:47,6,0	1/1:0,1:1:3.01:43,3,0	0/1:5,1:6:31.44:31,0,60	0/1:6,0:7:9.45:9,0,61	1/1:0,5:5:3.01:46,3,0	0/0:16,0:16:15.81:0,16,50	0/0:5,0:5:2.32:0,2,8	0/1:5,1:6:14.30:20,0,14	0/1:7,1:8:11.53:37,0,12	1/1:0,10:10:30.10:405,30,0	1/1:0,3:3:6.02:76,6,0	1/1:0,10:10:9.03:135,9,0	0/0:10,0:10:4.80:0,5,14	0/0:14,1:15:6.87:0,7,23	0/1:14,0:14:5.82:10,0,6	1/1:0,10:10:15.05:229,15,0	1/1:0,1:5:3.01:46,3,0	1/1:0,3:3:3.01:36,3,0	0/0:7,0:6:10.15:0,10,33	0/1:6,0:5:0:0,0,0	0/1:4,0:4:0:0,0,0	0/0:4,0:4:4.38:0,4,14	0/0:11,0:11:1.12:0,1,3	0/0:11,0:11:4.03:0,4,11	0/0:8,1:9:7.06:0,7,23	1/1:0,5:5:15.05:213,15,0	0/0:10,0:10:7.72:0,8,23	./.
chr10	102524253	.	G	GCA	4538.18	PASS	AB=0.698;AC=31;AF=0.574;AN=54;BaseQRankSum=3.011;DP=785;FS=5.832;HRun=0;HaplotypeScore=196.0267;InbreedingCoeff=0.6124;MQ=54.45;MQ0=6;MQRankSum=-5.625;QD=9.24;ReadPosRankSum=-1.669;VQSLOD=3.8255;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:54:99:0,102,1098	0/0:11,0:11:24.06:0,24,278	0/0:33,0:22:21.06:0,21,240	0/0:37,0:26:41.47:0,41,427	0/0:28,0:28:60.13:0,60,686	1/1:19,0:23:6:53,6,0	1/1:37,0:37:18.06:241,18,0	1/1:28,0:35:33.02:330,33,0	0/1:23,0:29:6.91:20,0,7	0/0:31,0:31:69.17:0,69,795	0/0:17,0:18:35.93:0,36,401	0/0:28,0:28:78.23:0,78,929	1/1:22,0:29:26.90:270,27,0	1/1:16,0:27:20.19:134,20,0	1/1:25,0:29:6:55,6,0	0/0:35,0:37:89.91:0,90,1017	0/1:9,20:33:68.33:841,0,68	0/1:10,19:30:12.18:807,0,12	1/1:14,0:19:27.82:234,28,0	1/1:9,0:21:30.96:176,31,0	1/1:19,1:27:11.56:77,12,0	1/1:20,0:26:8.51:62,9,0	./.	0/1:21,1:27:0:1,0,0	1/1:21,0:28:2.01:45,2,0	0/1:14,15:29:21.28:591,0,21	1/1:15,0:29:43.53:361,44,0	1/1:4,5:9:15.05:241,15,0
chr10	102524688	.	T	TATA	10818.12	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=12.460;DP=396;FS=5.731;HRun=0;HaplotypeScore=147.9699;InbreedingCoeff=0.9603;MQ=61.88;MQ0=13;MQRankSum=-12.604;QD=53.29;ReadPosRankSum=-3.122;VQSLOD=5.4090;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.22:0,63,1165	0/0:10,0:10:30.10:0,30,531	0/0:22,0:13:39.12:0,39,671	0/0:13,0:10:27.09:0,27,469	0/0:28,0:28:78.27:0,78,1447	1/1:7,2:9:27.09:663,27,0	1/1:9,0:9:24.07:539,24,0	1/1:11,0:10:30.10:657,30,0	1/1:11,1:12:33.10:761,33,0	0/0:26,0:26:75.24:0,75,1339	0/0:20,0:20:57.18:0,57,1032	0/0:23,0:23:63.22:0,63,1174	1/1:13,1:14:36.12:881,36,0	1/1:9,3:12:30.10:736,30,0	1/1:11,4:15:39.13:958,39,0	0/0:29,0:28:84.29:0,84,1560	1/1:9,0:8:7.37:226,7,0	1/1:9,0:9:21.07:516,21,0	1/1:7,0:6:17.09:373,17,0	1/1:9,4:15:30.10:736,30,0	1/1:8,1:8:15.05:362,15,0	1/1:6,0:6:18.05:394,18,0	1/1:7,0:7:18.06:441,18,0	1/1:11,0:11:15.05:337,15,0	1/1:12,0:14:24.08:589,24,0	1/1:13,1:14:39.10:837,39,0	1/1:9,5:13:27.09:664,27,0	1/1:5,0:4:6.02:147,6,0
chr10	102525885	.	ATATTGT	A	9817.16	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=14.924;DP=437;FS=57.252;HRun=0;HaplotypeScore=189.0754;InbreedingCoeff=0.9533;MQ=60.46;MQ0=0;MQRankSum=-13.205;QD=47.43;ReadPosRankSum=-1.165;VQSLOD=2.7918;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.08:0,54,1701	0/0:5,0:5:15.03:0,15,462	0/0:25,0:17:46.97:0,47,1268	0/0:21,0:14:24.99:0,25,996	0/0:26,0:26:78.16:0,78,2390	1/1:6,16:22:63.08:1263,63,0	1/1:1,8:9:11.87:229,12,0	1/1:17,16:33:94.64:1511,95,0	1/1:7,5:12:29.75:460,30,0	0/0:12,0:12:33.10:0,33,1035	0/0:16,0:16:45.04:0,45,1301	0/0:11,0:11:33.06:0,33,1032	1/1:6,7:13:38.76:613,39,0	1/1:5,4:9:23.95:378,24,0	1/1:4,5:9:26.92:443,27,0	0/0:20,0:20:57.20:0,57,1928	0/0:21,0:21:60.16:0,60,2034	0/0:25,0:25:69.12:0,69,2258	1/1:7,8:15:44.92:739,45,0	1/1:2,16:18:53.57:1106,54,0	1/1:2,2:4:5.93:89,6,0	1/1:3,7:10:23.87:503,24,0	1/1:6,11:16:47.70:817,48,0	1/1:0,7:7:3.01:53,3,0	1/1:5,8:13:38.71:573,39,0	0/0:22,0:22:66.20:0,66,2166	1/1:2,14:16:48.08:1043,48,0	0/0:7,0:7:21.07:0,21,565
chr10	102525904	.	GGTTTTTTTTGTT	G	11472.69	PASS	AB=0.714;AC=29;AF=0.518;AN=56;BaseQRankSum=15.641;DP=408;FS=29.447;HRun=0;HaplotypeScore=240.1943;InbreedingCoeff=0.8786;MQ=61.78;MQ0=9;MQRankSum=-14.223;QD=77.00;ReadPosRankSum=2.986;VQSLOD=3.1703;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.12:0,60,2390	0/0:7,0:7:18.06:0,18,881	0/0:46,0:19:51.15:0,51,1031	0/0:29,0:15:32.35:0,32,504	0/0:22,0:22:66.11:0,66,3101	1/1:6,11:17:50.90:1335,51,0	1/1:2,3:5:14.98:401,15,0	1/1:13,4:16:47.85:859,48,0	1/1:4,4:8:21.03:618,21,0	0/0:13,0:13:39.13:0,39,2184	0/0:13,0:13:36.12:0,36,1860	0/0:9,0:9:27.07:0,27,1101	1/1:2,5:7:20.94:668,21,0	1/1:4,3:7:21.03:569,21,0	1/1:2,4:6:17.99:542,18,0	0/0:18,0:18:51.13:0,51,2336	0/0:29,0:29:82.46:0,82,3866	0/0:26,0:26:72.19:0,72,3191	1/1:4,5:9:24.03:750,24,0	1/1:9,13:22:65.98:1865,66,0	1/1:2,1:2:6.02:162,6,0	1/1:3,7:10:30.06:880,30,0	1/1:5,8:12:36.06:1084,36,0	1/1:2,0:2:3.89:37,4,0	1/1:3,5:8:24.04:733,24,0	0/0:23,0:23:69.18:0,69,3182	0/1:9,6:15:50.65:970,0,51	0/0:4,0:4:9.03:0,9,508
chr10	102525908	.	T	TA	973.26	PASS	AB=0.884;AC=21;AF=0.389;AN=54;BaseQRankSum=8.789;DP=416;FS=15.451;HRun=0;HaplotypeScore=200.5491;InbreedingCoeff=0.3558;MQ=64.14;MQ0=10;MQRankSum=-10.498;QD=6.49;ReadPosRankSum=-0.410;VQSLOD=2.0145;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.12:0,57,719	0/0:8,0:8:21.03:0,21,270	0/0:51,0:23:38.23:0,38,450	0/0:27,0:13:27.45:0,27,262	0/0:23,0:23:63.14:0,63,809	1/1:17,0:17:19.88:150,20,0	0/1:5,0:5:11.72:45,0,12	1/1:14,4:17:46.28:300,46,0	1/1:8,0:8:1.50:32,2,0	0/0:14,0:14:39.12:0,39,530	0/0:15,0:15:36.12:0,36,501	0/0:9,0:9:24.07:0,24,319	1/1:6,1:7:0.16:39,0,0	0/1:6,1:7:23.02:25,0,23	1/1:6,0:6:10.88:68,11,0	0/0:17,0:17:45.08:0,45,604	0/0:29,0:29:78.23:0,78,1026	0/0:26,0:26:72.16:0,72,917	0/1:8,2:10:4.29:51,0,4	0/1:21,2:23:49.13:82,0,49	1/1:2,1:2:2.90:19,3,0	0/1:9,1:10:20.66:55,0,21	1/1:11,1:12:11.56:104,12,0	./.	0/1:7,2:9:16.11:62,0,16	0/0:21,0:21:62.39:0,62,790	0/1:12,3:15:18.16:120,0,18	0/0:4,0:4:9.03:0,9,114
chr10	102525913	.	T	TTAG	1559.97	PASS	AB=0.891;AC=17;AF=0.304;AN=56;BaseQRankSum=5.723;DP=387;FS=1.893;HRun=0;HaplotypeScore=194.4527;InbreedingCoeff=-0.1272;MQ=67.99;MQ0=11;MQRankSum=-7.549;QD=12.79;ReadPosRankSum=1.334;VQSLOD=3.3931;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.14:0,48,754	0/0:10,0:10:21.04:0,21,307	0/0:53,0:24:19.31:0,19,472	0/0:26,0:12:14.39:0,14,209	0/0:23,0:23:60.20:0,60,989	0/1:12,0:12:72.68:162,0,73	0/1:4,0:4:31.63:73,0,32	1/1:5,4:9:16.05:361,16,0	0/1:8,0:8:27.97:28,0,71	0/0:14,0:14:42.14:0,42,657	0/0:18,0:18:48.14:0,48,731	0/0:9,0:9:21.06:0,21,350	0/1:5,1:6:60.66:72,0,61	0/1:5,1:6:27.70:28,0,78	0/1:5,0:5:14.17:99,0,14	0/0:18,0:18:45.15:0,45,737	0/0:26,0:27:78.16:0,78,1216	0/0:22,0:22:60.16:0,60,987	0/1:7,2:9:67.86:98,0,68	0/1:18,2:20:99:163,0,177	0/1:2,1:2:3.98:41,0,4	0/1:8,1:9:94.59:110,0,95	0/1:10,1:11:61.13:205,0,61	1/1:1,0:1:1.25:3,1,0	0/1:6,2:8:64.73:129,0,65	0/0:21,0:21:60.19:0,60,963	0/1:7,3:10:99:153,0,101	0/0:3,0:4:8.99:0,9,119
chr10	102525914	.	GT	G	90.98	PASS	AB=0.974;AC=20;AF=0.357;AN=56;BaseQRankSum=7.940;DP=389;FS=1.148;HRun=13;HaplotypeScore=185.4554;InbreedingCoeff=0.0537;MQ=66.54;MQ0=12;MQRankSum=-6.074;QD=0.54;ReadPosRankSum=6.046;VQSLOD=-0.1345;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,1:16:14.16:0,14,299	0/0:7,0:9:14.22:0,14,149	0/0:55,0:23:3.63:0,4,126	0/1:29,0:14:7.61:8,0,100	0/0:21,2:23:13.21:0,13,436	0/1:12,0:12:4.27:34,0,4	0/0:4,0:4:1.79:0,2,21	0/0:10,0:9:7.18:0,7,46	0/1:8,0:8:13.03:13,0,15	0/0:14,1:16:8.58:0,9,251	0/1:15,2:18:1.95:2,0,279	0/1:7,2:9:9.89:10,0,75	1/1:6,0:6:9.02:28,9,0	0/1:6,0:6:2.08:2,0,31	0/1:5,0:5:4.90:11,0,5	0/0:18,0:18:29.10:0,29,310	0/0:24,1:26:15.30:0,15,484	0/0:22,0:22:41.90:0,42,408	1/1:9,0:9:0.19:21,0,0	0/1:20,0:20:27.75:28,0,35	1/1:3,0:2:0:0,0,0	0/1:9,0:9:2.75:3,0,33	0/1:11,0:11:14.98:15,0,15	0/0:1,0:1:0.47:0,0,1	0/1:8,0:8:5.86:8,0,6	0/0:20,1:21:23.02:0,23,364	1/1:10,0:10:12.22:43,12,0	0/1:4,0:4:11.06:11,0,49
chr10	102525916	.	T	TGGG	2925.57	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=12.172;DP=413;FS=7.932;HRun=0;HaplotypeScore=224.4461;InbreedingCoeff=0.7811;MQ=65.86;MQ0=12;MQRankSum=-11.241;QD=19.63;ReadPosRankSum=-2.232;VQSLOD=2.1674;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39.13:0,39,708	0/0:9,0:9:24.08:0,24,400	0/0:53,0:22:34.39:0,34,586	0/0:28,0:13:14.87:0,15,244	0/0:25,0:25:66.20:0,66,1142	1/1:12,0:12:13.16:144,13,0	1/1:5,0:5:11.28:130,11,0	1/1:13,1:13:38.91:420,39,0	1/1:9,1:10:14.12:190,14,0	0/0:17,0:17:45.14:0,45,772	0/0:17,0:17:48.15:0,48,803	0/0:8,0:8:21.06:0,21,339	1/1:7,0:7:7.46:80,7,0	1/1:6,0:6:11.70:158,12,0	1/1:6,0:6:10.35:101,10,0	0/0:17,0:17:45.15:0,45,793	0/0:26,0:26:75.71:0,76,1305	0/0:23,0:23:60.18:0,60,1041	0/1:12,0:12:24.28:169,0,24	1/1:20,1:21:47.34:517,47,0	1/1:4,0:3:8.94:105,9,0	1/1:11,0:11:20.06:223,20,0	1/1:15,0:15:29.54:361,30,0	1/1:1,0:1:3.01:35,3,0	1/1:13,1:14:29.78:339,30,0	0/0:21,0:21:60.20:0,60,1076	0/1:11,0:11:42.31:169,0,42	0/0:5,0:5:9.03:0,9,152
chr10	102525935	.	TC	T	3037.21	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=10.627;DP=378;FS=11.183;HRun=1;HaplotypeScore=208.0609;InbreedingCoeff=0.8574;MQ=69.40;MQ0=5;MQRankSum=-10.798;QD=30.99;ReadPosRankSum=1.360;VQSLOD=1.4129;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:23.20:0,23,619	0/0:8,0:8:3.24:0,3,240	0/0:28,1:16:23.21:0,23,336	0/0:22,0:14:20.38:0,20,268	0/0:24,0:24:69.11:0,69,953	1/1:0,16:16:43.07:526,43,0	1/1:1,5:6:17.54:199,18,0	0/0:16,0:16:12.36:0,12,142	1/1:0,9:9:27.08:342,27,0	0/0:15,0:15:45.12:0,45,619	0/0:17,0:17:48.16:0,48,717	0/0:6,0:6:15.05:0,15,224	1/1:0,6:6:17.97:212,18,0	1/1:0,5:5:15.05:193,15,0	1/1:0,6:6:18.05:219,18,0	0/0:13,0:13:35.80:0,36,438	0/0:26,0:26:77.29:0,77,1091	0/0:24,0:24:51.89:0,52,758	0/0:11,1:12:9.30:0,9,102	0/0:20,0:20:34.92:0,35,204	0/1:3,0:3:11.43:11,0,15	1/1:1,14:15:31.89:500,32,0	1/1:0,16:16:45.05:509,45,0	1/1:1,0:1:2.97:20,3,0	1/1:1,14:15:33.71:520,34,0	0/0:15,0:15:29.12:0,29,536	0/0:8,0:8:17.82:0,18,84	0/0:7,0:7:21.07:0,21,314
chr10	102525939	.	TG	T	3006.04	PASS	AB=1.000;AC=19;AF=0.352;AN=54;BaseQRankSum=10.674;DP=363;FS=16.887;HRun=1;HaplotypeScore=212.8101;InbreedingCoeff=0.8891;MQ=66.45;MQ0=4;MQRankSum=-11.236;QD=30.99;ReadPosRankSum=1.148;VQSLOD=0.6896;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:45.15:0,45,716	0/0:7,0:7:15.04:0,15,237	0/0:22,3:13:27.04:0,27,362	0/0:17,3:12:17.72:0,18,219	0/0:24,0:24:63.14:0,63,926	1/1:16,0:16:43.07:528,43,0	1/1:5,1:6:17.54:198,18,0	0/0:18,0:18:7.58:0,8,158	1/1:9,0:9:27.07:326,27,0	0/0:12,0:12:36.12:0,36,557	0/0:16,0:16:48.16:0,48,765	0/0:7,0:7:18.05:0,18,264	1/1:6,0:6:18.06:230,18,0	1/1:5,0:5:15.05:193,15,0	1/1:6,0:6:18.05:221,18,0	0/0:11,0:11:30.10:0,30,478	0/0:27,0:27:66.20:0,66,1050	0/0:25,0:25:56.18:0,56,853	0/0:10,0:10:7.86:0,8,108	0/0:19,0:19:36.78:0,37,232	0/1:3,0:3:11.44:11,0,17	1/1:15,0:15:29.60:488,30,0	1/1:14,1:16:44.99:501,45,0	./.	1/1:15,0:15:33.05:518,33,0	0/0:13,0:13:36.12:0,36,575	0/0:7,0:7:18.13:0,18,95	0/0:8,0:8:24.06:0,24,359
chr10	102525946	.	T	TTCC	1883.04	PASS	AB=1.000;AC=5;AF=0.093;AN=54;BaseQRankSum=-7.308;DP=350;FS=4.639;HRun=0;HaplotypeScore=228.6961;InbreedingCoeff=0.5462;MQ=60.20;MQ0=4;MQRankSum=2.768;QD=26.15;ReadPosRankSum=1.247;VQSLOD=3.4427;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:36.12:0,36,518	0/0:5,0:5:12.04:0,12,175	0/0:22,0:10:15:0,15,165	0/1:19,0:10:11.98:12,0,78	0/0:21,0:21:48.16:0,48,698	0/0:14,0:14:20.57:0,21,131	0/0:6,0:6:1.85:0,2,18	0/0:17,0:17:28.31:0,28,199	0/0:9,0:9:14.51:0,15,88	0/0:14,0:14:0.08:0,0,327	0/0:15,0:15:36.12:0,36,522	0/0:7,0:7:12.04:0,12,173	0/0:6,0:6:12.24:0,12,79	0/0:5,0:5:14.88:0,15,104	0/0:6,0:6:4.03:0,4,38	0/0:9,0:9:21.06:0,21,288	1/1:4,22:27:52.90:1134,53,0	1/1:6,20:26:42.14:863,42,0	0/0:10,0:10:14.79:0,15,101	0/0:19,0:19:33.98:0,34,234	0/0:3,0:3:8.93:0,9,64	0/0:15,0:15:41.56:0,42,283	0/0:15,0:15:26.06:0,26,173	./.	0/0:15,0:15:35.76:0,36,234	0/0:12,0:12:27.09:0,27,392	0/0:7,0:7:9.68:0,10,58	0/0:8,0:8:21.07:0,21,306
chr10	102525950	.	TC	T	1165.57	PASS	AB=0.599;AC=22;AF=0.407;AN=54;BaseQRankSum=12.641;DP=323;FS=10.885;HRun=2;HaplotypeScore=187.4452;InbreedingCoeff=0.5297;MQ=54.71;MQ0=8;MQRankSum=-11.564;QD=8.97;ReadPosRankSum=2.679;VQSLOD=0.3836;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:42.14:0,42,624	0/0:5,0:5:12.04:0,12,180	0/0:20,0:9:23.98:0,24,312	0/0:16,0:6:8.98:0,9,110	0/0:18,0:18:51.17:0,51,764	1/1:2,10:12:29.44:151,29,0	0/1:1,3:4:4.12:22,0,4	0/1:4,12:16:25.88:141,0,26	0/1:4,4:8:27.51:59,0,28	0/0:11,0:11:30.10:0,30,449	0/0:14,0:14:42.13:0,42,609	0/0:7,0:7:18.06:0,18,261	0/1:1,5:6:6.43:54,0,6	1/1:0,5:5:14.51:79,15,0	1/1:1,3:4:8.65:46,9,0	0/0:10,0:9:27.09:0,27,395	0/0:28,0:28:63.17:0,63,497	0/0:24,0:24:51.29:0,51,451	0/1:3,5:8:21.20:61,0,21	1/1:5,12:17:13.02:170,13,0	1/1:0,3:3:8.45:41,8,0	1/1:0,14:14:39.64:207,40,0	1/1:2,11:13:5.74:105,6,0	./.	1/1:2,13:15:36.27:183,36,0	0/0:14,0:12:36.12:0,36,534	0/1:2,3:5:9.24:42,0,9	0/0:9,0:8:24.08:0,24,355
chr10	102525953	.	TCC	T	1976.72	PASS	AB=0.589;AC=23;AF=0.426;AN=54;BaseQRankSum=13.024;DP=323;FS=11.833;HRun=2;HaplotypeScore=180.7879;InbreedingCoeff=0.6505;MQ=54.73;MQ0=11;MQRankSum=-11.829;QD=15.69;ReadPosRankSum=3.073;VQSLOD=-0.0657;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:42.14:0,42,828	0/0:6,0:6:15.05:0,15,283	0/0:21,0:10:24.06:0,24,396	0/0:14,0:5:9.03:0,9,157	0/0:19,0:18:51.18:0,51,1033	1/1:2,10:12:29.73:209,30,0	1/1:1,3:4:11.92:89,12,0	0/1:3,12:15:11.50:248,0,12	0/1:4,4:8:17.78:77,0,18	0/0:10,0:10:30.10:0,30,593	0/0:14,0:14:42.14:0,42,811	0/0:8,0:7:18.06:0,18,322	0/1:2,5:6:1.07:88,0,1	1/1:0,5:5:14.92:113,15,0	1/1:0,3:3:8.94:66,9,0	0/0:10,0:9:27.06:0,27,475	0/0:28,0:28:65.70:0,66,813	0/0:25,0:25:59.88:0,60,726	0/1:2,5:7:12.05:110,0,12	1/1:2,12:14:15.98:270,16,0	1/1:1,3:4:9.85:72,10,0	1/1:0,14:14:41.56:286,42,0	1/1:2,11:12:16.65:210,17,0	./.	1/1:2,13:14:38.57:258,39,0	0/0:14,0:12:36.11:0,36,692	0/1:1,4:5:3.99:82,0,4	0/0:10,0:9:27.07:0,27,488
chr10	102525963	.	TTTCCTCCTCCTC	T	5915.51	PASS	AB=0.905;AC=21;AF=0.389;AN=54;BaseQRankSum=10.719;DP=337;FS=0.553;HRun=0;HaplotypeScore=209.1192;InbreedingCoeff=0.6806;MQ=48.76;MQ0=19;MQRankSum=-10.039;QD=55.81;ReadPosRankSum=4.354;VQSLOD=4.4247;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:33.10:0,33,1445	0/0:6,0:6:15.05:0,15,721	0/0:20,0:6:12.03:0,12,201	0/0:17,0:4:3.01:0,3,37	0/0:21,0:20:57.20:0,57,2811	1/1:5,5:10:21.07:624,21,0	1/1:4,0:4:9.03:157,9,0	0/0:16,0:14:18.20:0,18,118	0/1:3,2:5:5.98:212,0,6	0/0:13,0:13:33.11:0,33,1435	0/0:15,0:15:42.14:0,42,2119	0/0:9,0:8:18.06:0,18,882	1/1:3,3:5:12.04:362,12,0	1/1:2,3:5:9.03:308,9,0	1/1:2,2:4:9.03:257,9,0	0/0:9,0:8:21.06:0,21,1006	0/0:31,0:32:68.01:0,68,3256	0/0:25,0:25:42.03:0,42,2291	1/1:8,0:5:6.02:164,6,0	0/1:16,0:15:18.06:569,0,18	0/0:4,0:4:2.89:0,3,34	1/1:3,11:14:36.12:1161,36,0	1/1:6,7:12:24.08:813,24,0	./.	1/1:3,11:13:39.13:1213,39,0	0/0:16,0:13:39.13:0,39,2066	0/1:7,0:6:12.09:76,0,12	0/0:11,0:10:30.10:0,30,1503
chr10	102525964	.	TTCCTCCTCCTCTTCC	T	4961.56	PASS	AB=1.000;AC=20;AF=0.370;AN=54;BaseQRankSum=12.498;DP=365;FS=5.881;HRun=0;HaplotypeScore=246.6656;InbreedingCoeff=0.2545;MQ=47.59;MQ0=19;MQRankSum=-10.796;QD=32.43;ReadPosRankSum=3.558;VQSLOD=3.0882;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:30.10:0,30,1683	0/0:6,0:6:15.03:0,15,781	0/0:20,0:7:2.79:0,3,277	./.	0/0:20,0:19:57.17:0,57,3270	0/1:13,0:13:88.57:347,0,89	0/1:6,0:6:41.90:42,0,62	1/1:17,0:15:23.91:247,24,0	0/1:5,0:6:78.71:130,0,79	0/0:13,0:13:33.10:0,33,1624	0/0:15,0:15:42.13:0,42,2525	0/0:10,0:9:21.07:0,21,1243	1/1:6,0:5:11.99:232,12,0	0/1:8,0:8:67.56:195,0,68	0/1:6,0:6:75.42:126,0,75	0/0:9,0:8:18.06:0,18,1198	0/0:32,0:32:49.29:0,49,4060	0/0:25,0:25:50.93:0,51,2784	1/1:6,2:5:6.02:254,6,0	1/1:9,7:15:44.89:1136,45,0	1/1:4,0:4:2.81:17,3,0	0/1:16,0:16:38.60:752,0,39	0/1:20,0:19:99:512,0,231	0/0:1,0:1:3.01:0,3,37	0/1:20,0:19:99:744,0,185	0/0:16,0:13:39.13:0,39,2514	1/1:6,1:6:12:228,12,0	0/0:11,0:10:30.10:0,30,1916
chr10	102525974	.	TC	T	406.06	PASS	AB=0.991;AC=14;AF=0.250;AN=56;BaseQRankSum=10.371;DP=378;FS=7.209;HRun=2;HaplotypeScore=158.9198;InbreedingCoeff=-0.0779;MQ=49.49;MQ0=21;MQRankSum=-9.310;QD=3.03;ReadPosRankSum=4.399;VQSLOD=0.1689;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:35.86:0,36,537	0/0:7,0:7:21.07:0,21,329	0/0:25,0:9:22.48:0,22,238	0/0:17,0:2:3:0,3,28	0/0:22,0:21:63.21:0,63,1002	0/1:14,0:14:51.34:64,0,51	0/0:7,0:7:14.64:0,15,103	0/0:12,3:13:0.38:0,0,345	0/1:6,0:6:12.55:13,0,57	0/0:13,0:13:36.12:0,36,573	0/0:15,0:15:45.15:0,45,719	0/0:12,0:11:30.10:0,30,469	0/1:8,0:7:28.19:28,0,41	0/1:9,0:9:21.27:21,0,61	0/1:5,0:5:19.55:20,0,25	0/0:11,0:10:30.10:0,30,471	0/0:33,0:33:79.28:0,79,1153	0/0:22,0:22:54.18:0,54,859	1/1:8,0:4:9.06:33,9,0	0/1:18,2:19:46.37:46,0,263	0/0:4,0:4:10.21:0,10,96	0/1:15,0:15:32.86:121,0,33	0/1:19,0:18:40.99:96,0,41	1/1:2,0:2:0.89:2,1,0	0/1:21,0:20:99:103,0,110	0/0:17,0:14:42.14:0,42,669	0/1:7,0:6:10.21:10,0,100	0/0:11,0:10:30.10:0,30,479
chr10	102525977	.	TCC	T	417.33	PASS	AB=0.979;AC=14;AF=0.250;AN=56;BaseQRankSum=11.077;DP=382;FS=6.162;HRun=2;HaplotypeScore=164.0568;InbreedingCoeff=-0.0853;MQ=54.18;MQ0=21;MQRankSum=-8.427;QD=2.38;ReadPosRankSum=4.775;VQSLOD=-0.4345;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:11:32.47:0,32,602	0/0:7,0:7:21.07:0,21,400	0/1:28,0:11:10.60:11,0,196	0/0:16,0:1:0:0,0,0	0/0:23,0:22:66.22:0,66,1263	0/1:14,0:14:4.12:4,0,335	0/0:8,0:8:24.07:0,24,410	0/1:12,3:13:52.82:53,0,175	0/1:6,0:6:4.45:4,0,65	0/0:14,0:14:39.13:0,39,714	0/0:15,0:15:45.14:0,45,840	0/0:12,0:11:30.10:0,30,609	0/1:8,0:7:9.06:9,0,135	0/1:8,0:8:6.51:7,0,161	0/1:5,0:5:1.37:1,0,159	0/0:11,0:10:30.09:0,30,571	0/0:32,0:32:71.39:0,71,1404	0/0:22,0:22:57.17:0,57,1018	1/1:8,0:4:11.89:87,12,0	0/1:20,2:21:99:251,0,112	0/0:4,0:4:4.07:0,4,12	0/1:15,0:15:50.20:50,0,91	0/1:19,0:18:11.41:11,0,453	0/0:3,0:3:9.03:0,9,154	0/1:21,0:20:30.84:31,0,396	0/0:17,0:14:42.14:0,42,830	0/1:6,0:5:24.40:44,0,24	0/0:11,0:10:30.10:0,30,586
chr10	102525997	.	CT	C	4218.71	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=11.384;DP=373;FS=0.444;HRun=8;HaplotypeScore=120.6780;InbreedingCoeff=0.9485;MQ=61.86;MQ0=5;MQRankSum=-10.311;QD=25.41;ReadPosRankSum=0.550;VQSLOD=3.7213;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:27.06:0,27,313	0/0:8,0:8:21.06:0,21,254	0/0:20,0:11:21.98:0,22,186	0/0:16,0:3:5.60:0,6,42	0/0:23,0:23:66.19:0,66,784	1/1:0,13:13:33.05:318,33,0	1/1:0,8:8:21.03:203,21,0	1/1:1,12:12:36.06:347,36,0	1/1:1,3:4:9.01:87,9,0	0/0:12,0:12:30.09:0,30,362	0/0:13,0:13:36.03:0,36,415	0/0:13,0:13:39.12:0,39,469	1/1:1,5:6:14.99:145,15,0	1/1:1,6:7:15.02:145,15,0	1/1:0,8:8:21.03:203,21,0	0/0:12,0:12:36.11:0,36,433	0/0:34,0:34:75.20:0,75,891	0/0:20,0:20:48.15:0,48,580	1/1:1,9:9:27.04:259,27,0	1/1:0,21:21:63.03:591,63,0	1/1:0,4:4:6.01:57,6,0	1/1:0,19:19:54.08:521,54,0	1/1:1,22:23:63:595,63,0	1/1:0,5:5:15.02:143,15,0	1/1:3,18:21:51.08:492,51,0	0/0:16,0:16:39.11:0,39,461	1/1:0,4:4:12.02:115,12,0	0/0:9,0:9:24.07:0,24,290
chr10	102526104	.	A	AGTT	726.05	PASS	AB=0.914;AC=14;AF=0.292;AN=48;BaseQRankSum=1.913;DP=243;FS=20.959;HRun=0;HaplotypeScore=48.1748;InbreedingCoeff=0.0448;MQ=28.40;MQ0=68;MQRankSum=-1.180;QD=5.90;ReadPosRankSum=2.877;VQSLOD=0.0886;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:8:8.24:0,8,98	0/0:5,0:4:9.03:0,9,134	0/0:6,0:1:3.01:0,3,34	./.	0/0:8,0:5:5.98:0,6,58	0/1:20,2:13:65.12:128,0,65	0/0:4,0:3:5.50:0,6,42	0/1:13,0:11:5.76:223,0,6	0/0:2,0:1:3.01:0,3,33	0/0:9,0:5:12.04:0,12,192	0/0:6,0:6:12.02:0,12,181	./.	./.	./.	1/1:3,0:3:3:28,3,0	0/0:6,0:5:9.03:0,9,145	0/0:6,0:3:8.39:0,8,99	0/0:9,0:5:12.04:0,12,171	0/1:11,0:5:13.50:86,0,13	0/1:11,3:8:2.87:110,0,3	1/1:12,0:7:1.25:6,1,0	0/1:12,1:6:8.27:81,0,8	0/1:10,1:7:11.18:11,0,37	0/1:6,1:4:5.57:45,0,6	0/1:12,1:12:40.86:132,0,41	0/0:18,0:7:21.05:0,21,327	1/1:3,0:1:2.50:9,2,0	0/0:5,0:4:6:0,6,66
chr10	102526114	.	GGAA	G	818.39	PASS	AB=1.000;AC=33;AF=0.688;AN=48;BaseQRankSum=0.561;DP=228;FS=2.237;HRun=0;HaplotypeScore=48.2635;InbreedingCoeff=0.2802;MQ=26.86;MQ0=67;MQRankSum=0.489;QD=4.52;ReadPosRankSum=-0.606;VQSLOD=1.5076;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:6:6.88:31,7,0	0/1:5,0:4:27.16:27,0,45	./.	./.	0/0:5,2:4:2.97:0,3,20	1/1:18,1:10:16.48:135,16,0	1/1:3,0:2:2.94:18,3,0	1/1:4,9:11:24.55:164,25,0	1/1:2,0:1:2.96:19,3,0	0/0:9,0:5:14.94:0,15,123	0/1:7,0:7:8.32:8,0,78	0/0:10,0:8:11.87:0,12,79	./.	./.	1/1:0,4:3:2.96:19,3,0	0/0:7,0:6:11.92:0,12,89	0/0:4,0:1:2.68:0,3,11	1/1:9,0:5:11.94:94,12,0	1/1:8,1:3:4.04:21,4,0	1/1:13,0:7:2.28:23,2,0	1/1:15,0:10:6.77:38,7,0	0/1:12,0:6:3.56:29,0,4	0/1:8,0:5:3.97:49,0,4	1/1:9,0:4:7.59:37,8,0	1/1:12,0:11:11.64:130,12,0	1/1:16,0:5:11.18:80,11,0	1/1:3,0:1:2.68:11,3,0	0/1:6,0:5:20.88:35,0,21
chr10	102527656	.	A	AT	14887.10	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-17.572;DP=731;FS=1.571;HRun=4;HaplotypeScore=64.5599;InbreedingCoeff=0.9988;MQ=88.07;MQ0=0;MQRankSum=-4.898;QD=36.22;ReadPosRankSum=1.522;VQSLOD=5.2894;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:81.23:0,81,919	0/0:10,0:10:30.08:0,30,333	0/0:23,0:23:63.16:0,63,697	0/0:29,0:29:68.18:0,68,793	0/0:33,0:33:96.26:0,96,1078	1/1:2,23:25:69.23:944,69,0	1/1:4,21:25:63.21:862,63,0	1/1:6,25:31:75.25:1026,75,0	1/1:2,32:34:81.27:1108,81,0	0/0:30,0:30:87.23:0,87,977	0/0:20,0:20:57.16:0,57,647	0/0:21,0:21:60.14:0,60,662	1/1:3,24:27:72.24:975,72,0	1/1:0,29:29:81.27:1108,81,0	1/1:2,18:20:51.17:698,51,0	0/0:36,1:37:67.26:0,67,1150	0/0:25,0:25:69.18:0,69,773	0/0:19,0:19:57.14:0,57,634	1/1:0,20:20:57.19:780,57,0	1/1:1,24:25:69.23:944,69,0	1/1:1,22:23:60.20:821,60,0	1/1:1,19:20:57.19:780,57,0	1/1:2,22:24:63.21:862,63,0	1/1:3,23:26:63.21:862,63,0	1/1:2,32:34:93.31:1272,93,0	0/0:33,0:33:90.22:0,90,994	1/1:2,46:48:99:1846,135,0	0/0:9,0:9:18.05:0,18,204
chr10	102527963	.	GGT	G	790.17	PASS	AB=0.943;AC=27;AF=0.519;AN=52;BaseQRankSum=3.961;DP=598;FS=2.920;HRun=0;HaplotypeScore=92.0324;InbreedingCoeff=-0.2390;MQ=60.37;MQ0=16;MQRankSum=-0.831;QD=1.64;ReadPosRankSum=-2.447;VQSLOD=1.2922;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,2:44:69.69:70,0,256	0/0:6,0:6:2.96:0,3,19	./.	./.	0/1:19,1:19:8.78:9,0,253	0/1:23,1:25:14.30:14,0,226	0/1:31,0:31:25.57:26,0,217	1/1:29,0:27:3.01:32,3,0	0/1:16,0:16:2.14:2,0,126	0/1:24,0:27:70.72:71,0,92	0/1:9,2:10:50:50,0,98	0/1:20,1:21:19.59:20,0,263	0/0:14,0:14:9.03:0,9,134	0/1:20,0:20:14.01:14,0,185	0/1:17,1:18:76.26:76,0,197	0/0:15,0:15:27.04:0,27,371	0/1:18,1:29:23.02:23,0,331	0/0:10,0:20:18.02:0,18,194	1/1:13,1:18:14.47:93,14,0	1/1:11,0:15:5.68:28,6,0	1/1:12,1:12:3.01:33,3,0	0/1:20,0:20:9.27:9,0,101	0/0:17,1:17:6.02:0,6,89	0/1:34,3:36:78.93:79,0,480	0/1:31,2:33:8.71:9,0,252	0/1:17,2:19:32.50:67,0,33	1/1:17,8:27:20.72:190,21,0	1/1:2,1:3:3.01:33,3,0
chr10	102528244	.	C	CACAT	5671.96	PASS	AB=0.990;AC=31;AF=0.646;AN=48;BaseQRankSum=2.876;DP=687;FS=3.178;HRun=0;HaplotypeScore=225.3994;InbreedingCoeff=0.4734;MQ=62.44;MQ0=7;MQRankSum=-3.579;QD=12.86;ReadPosRankSum=-1.167;VQSLOD=4.4906;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:43,5:48:12.48:1009,12,0	0/0:9,0:9:12.04:0,12,182	./.	./.	1/1:12,12:25:21.07:491,21,0	0/0:26,0:26:24.03:0,24,318	0/0:24,0:24:18.06:0,18,273	./.	1/1:7,5:12:3.01:70,3,0	0/0:29,0:29:39.12:0,39,560	0/1:18,1:19:37.06:37,0,404	0/0:29,0:29:45.15:0,45,687	1/1:27,4:31:30.01:522,30,0	1/1:18,3:20:18.84:230,19,0	0/1:27,0:26:37.13:39,0,37	0/0:29,0:30:66.14:0,66,901	1/1:19,1:21:6:93,6,0	1/1:10,3:13:23.73:408,24,0	1/1:11,0:14:8.86:79,9,0	1/1:26,0:31:25.27:324,25,0	./.	1/1:32,4:36:31.31:631,31,0	1/1:20,6:26:27.06:514,27,0	0/1:23,0:23:26.05:220,0,26	1/1:24,9:33:31.84:572,32,0	0/1:23,0:33:99:100,0,322	1/1:19,0:23:10.69:237,11,0	0/1:3,0:5:32.98:96,0,33
chr10	102528284	.	TAC	T	751.49	PASS	AB=0.794;AC=8;AF=0.143;AN=56;BaseQRankSum=7.773;DP=649;FS=6.517;HRun=0;HaplotypeScore=248.2795;InbreedingCoeff=-0.1705;MQ=49.95;MQ0=10;MQRankSum=-7.289;QD=3.78;ReadPosRankSum=1.352;VQSLOD=1.7059;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.25:0,87,1233	0/0:12,0:12:33.11:0,33,537	0/0:13,0:6:6.47:0,6,164	0/0:18,0:9:23.07:0,23,275	0/0:23,0:23:51.15:0,51,736	0/0:17,5:22:32.58:0,33,515	0/1:15,5:20:49.05:49,0,416	0/1:26,2:21:32.67:33,0,658	0/0:16,2:18:11.76:0,12,126	0/0:28,0:27:81.27:0,81,1368	0/0:27,0:27:75.21:0,75,1182	0/0:26,0:26:69.24:0,69,1227	0/1:25,9:34:51.80:52,0,278	0/0:14,7:20:15.07:0,15,118	0/0:19,2:20:11.11:0,11,93	0/0:38,0:38:99:0,108,1900	0/0:13,0:13:24.06:0,24,373	0/1:11,1:12:8.95:9,0,342	0/0:9,0:7:9.16:0,9,170	0/1:23,10:33:19.93:20,0,262	0/0:7,0:7:6.02:0,6,94	0/0:26,10:36:31.65:0,32,426	0/0:23,13:36:29.37:0,29,381	0/0:10,0:10:21.06:0,21,296	0/0:31,8:38:31.73:0,32,399	0/1:19,11:33:31.35:368,0,31	0/1:18,10:28:99:201,0,173	0/1:2,6:11:13.97:154,0,14
chr10	102528286	.	C	CAT	1707.85	PASS	AB=0.964;AC=19;AF=0.339;AN=56;BaseQRankSum=13.545;DP=658;FS=5.918;HRun=0;HaplotypeScore=257.0334;InbreedingCoeff=-0.3204;MQ=49.43;MQ0=9;MQRankSum=-5.476;QD=3.77;ReadPosRankSum=2.763;VQSLOD=1.4648;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:69.26:69,0,426	0/0:11,0:11:30.10:0,30,428	0/0:14,0:6:13.31:0,13,171	0/0:18,0:9:20.09:0,20,252	0/1:22,0:22:42.17:42,0,300	0/0:22,1:23:5.79:0,6,300	0/1:18,1:19:49.08:49,0,276	0/1:28,0:21:74.30:74,0,586	0/1:19,0:19:15.63:16,0,16	0/0:29,0:28:58.72:0,59,1047	0/0:28,0:28:56.68:0,57,872	0/0:25,0:25:69.23:0,69,987	0/1:32,2:34:36.19:104,0,36	1/1:22,0:21:16.55:79,17,0	0/1:17,2:18:24.35:24,0,32	0/0:38,0:38:99:0,114,1512	0/0:12,0:12:5.49:0,5,131	0/1:11,1:12:39.96:107,0,40	0/1:9,0:7:6.34:6,0,140	0/1:32,3:35:58.59:153,0,59	0/0:7,0:7:2.99:0,3,24	0/1:33,5:38:2.53:72,0,3	0/1:35,2:37:23.25:60,0,23	0/1:11,0:11:7.60:8,0,54	0/1:38,0:38:13.28:58,0,13	0/1:31,2:33:99:451,0,308	0/1:28,1:29:11.60:310,0,12	0/1:13,0:13:16.94:185,0,17
chr10	102528290	.	C	CAT	2393.48	PASS	AB=0.973;AC=27;AF=0.500;AN=54;BaseQRankSum=12.574;DP=639;FS=8.096;HRun=0;HaplotypeScore=254.8257;InbreedingCoeff=0.4371;MQ=50.40;MQ0=4;MQRankSum=-3.704;QD=5.84;ReadPosRankSum=-0.515;VQSLOD=1.4848;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:99:187,0,358	0/0:10,0:10:30.10:0,30,453	0/0:12,0:6:9.09:0,9,150	0/0:16,0:9:9.16:0,9,281	0/1:18,0:18:73.83:74,0,318	0/0:23,0:23:5.78:0,6,314	0/0:19,0:19:1.75:0,2,250	0/0:25,0:21:32.39:0,32,703	1/1:18,0:18:5.67:29,6,0	0/0:28,0:28:81.25:0,81,1167	0/0:26,0:26:55.19:0,55,1001	0/0:26,0:26:72.23:0,72,1075	1/1:34,0:34:27.13:148,27,0	1/1:22,0:21:16.03:73,16,0	0/1:17,0:16:24.35:24,0,35	0/0:39,0:39:99:0,114,1607	0/1:9,0:9:11.90:12,0,38	1/1:12,0:12:22.49:139,22,0	0/1:7,1:7:92.57:99,0,93	1/1:26,9:35:32.56:449,33,0	./.	1/1:37,0:37:27.91:146,28,0	1/1:38,0:38:26.29:184,26,0	0/1:10,0:10:0.81:71,0,1	1/1:40,0:40:28.32:164,28,0	0/1:33,3:36:99:192,0,340	1/1:23,5:28:39.43:423,39,0	1/1:11,3:14:15.49:174,15,0
chr10	102528300	.	T	TAC	2090.51	PASS	AB=0.963;AC=21;AF=0.375;AN=56;BaseQRankSum=12.135;DP=611;FS=7.680;HRun=0;HaplotypeScore=246.4845;InbreedingCoeff=-0.1555;MQ=53.23;MQ0=4;MQRankSum=-10.747;QD=5.24;ReadPosRankSum=-0.153;VQSLOD=1.9715;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:40.88:0,41,683	0/0:9,0:9:27.09:0,27,412	0/0:15,0:10:28.87:0,29,350	0/0:18,0:11:30.04:0,30,434	0/0:17,0:17:45.11:0,45,584	0/1:19,0:19:14.92:15,0,94	0/1:17,0:17:33.98:34,0,150	0/1:24,2:22:99:100,0,578	0/1:16,0:16:6.36:6,0,27	0/0:27,0:27:78.24:0,78,1120	0/0:25,0:25:72.24:0,72,1086	0/0:27,0:27:72.24:0,72,1100	0/1:29,0:29:47.85:85,0,48	0/1:25,0:24:26.95:27,0,45	0/1:16,0:15:24.35:24,0,34	0/0:34,0:34:99:0,99,1513	0/0:6,0:6:5.56:0,6,33	0/1:11,0:11:78.63:136,0,79	0/1:6,1:6:44.63:45,0,87	1/1:25,8:34:23.98:387,24,0	1/1:5,0:5:3.01:57,3,0	0/1:37,0:37:40.57:50,0,41	0/1:34,0:34:13.74:14,0,99	0/1:7,1:8:16.22:16,0,18	0/1:37,0:37:4.02:4,0,97	0/1:33,3:36:99:533,0,480	1/1:22,5:27:28.96:437,29,0	0/1:12,3:15:21.29:292,0,21
chr10	102528302	.	TAC	T	1971.82	PASS	AB=0.764;AC=12;AF=0.214;AN=56;BaseQRankSum=9.199;DP=607;FS=4.737;HRun=0;HaplotypeScore=238.6381;InbreedingCoeff=0.2418;MQ=55.24;MQ0=4;MQRankSum=-9.224;QD=9.81;ReadPosRankSum=2.872;VQSLOD=3.3134;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:59:0,59,989	0/0:9,0:9:27.09:0,27,485	0/0:18,0:12:35.94:0,36,555	0/0:19,0:12:33:0,33,542	0/0:18,0:18:50.83:0,51,903	0/0:10,9:19:14.51:0,15,130	0/1:9,9:18:61.99:62,0,214	0/1:21,7:24:99:300,0,745	0/0:12,4:16:5.75:0,6,68	0/0:26,0:26:78.23:0,78,1386	0/0:25,0:25:72.25:0,72,1389	0/0:28,0:28:81.22:0,81,1442	0/1:15,12:27:65.92:66,0,88	0/0:13,12:24:3.90:0,4,102	0/0:11,5:15:11.11:0,11,76	0/0:33,0:33:99:0,99,1883	0/0:6,0:6:2.99:0,3,34	0/1:9,2:11:93.69:94,0,129	0/1:6,1:6:14.85:15,0,63	1/1:18,15:33:23.06:243,23,0	0/0:5,0:5:0.47:0,0,1	0/0:16,19:35:10.55:0,11,92	0/0:17,17:34:13.49:0,13,191	0/0:5,1:6:3.70:0,4,37	0/0:25,12:37:16.69:0,17,185	0/1:21,15:36:99:683,0,600	1/1:9,18:27:12.65:347,13,0	1/1:4,10:14:5.20:319,5,0
chr10	102528304	.	C	CATACATACATAT	10917.40	PASS	AB=0.986;AC=36;AF=0.643;AN=56;BaseQRankSum=8.685;DP=613;FS=22.183;HRun=0;HaplotypeScore=327.5760;InbreedingCoeff=0.7027;MQ=56.36;MQ0=4;MQRankSum=-12.286;QD=27.23;ReadPosRankSum=-2.164;VQSLOD=2.6033;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:39.08:0,39,1292	0/0:9,0:9:21.07:0,21,757	0/0:20,0:14:29.05:0,29,596	0/0:19,0:13:32.39:0,32,741	0/0:18,0:18:50.81:0,51,1470	1/1:16,3:19:6.02:357,6,0	1/1:18,0:18:9.03:285,9,0	1/1:30,0:26:54.09:1239,54,0	1/1:12,6:18:5.30:274,5,0	0/0:26,0:26:69.23:0,69,2199	0/0:25,0:25:72.23:0,72,2308	0/0:28,0:28:75.18:0,75,2150	1/1:26,1:27:9.73:764,10,0	1/1:20,4:23:5.71:98,6,0	1/1:13,3:15:3.01:151,3,0	0/0:34,0:34:96.25:0,96,2901	1/1:5,1:6:3.81:106,4,0	1/1:11,0:11:18.04:604,18,0	1/1:7,0:6:3.01:170,3,0	1/1:32,0:32:30.08:811,30,0	1/1:4,0:4:3.90:96,4,0	1/1:32,1:33:5.14:181,5,0	1/1:32,2:34:4.26:123,4,0	0/1:6,0:6:0:0,0,0	1/1:29,8:37:4.78:182,5,0	0/1:34,1:35:5.70:2823,0,6	1/1:30,0:30:42.10:1420,42,0	1/1:14,0:14:30.10:1234,30,0
chr10	102528339	.	T	TTC	10436.89	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=12.256;DP=610;FS=14.725;HRun=0;HaplotypeScore=279.8667;InbreedingCoeff=0.9396;MQ=65.16;MQ0=6;MQRankSum=-13.642;QD=27.98;ReadPosRankSum=-4.645;VQSLOD=2.9202;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:20.03:0,20,488	0/0:10,0:10:24.07:0,24,292	0/0:36,0:23:36.59:0,37,425	0/0:48,0:29:17.60:0,18,356	0/0:12,0:12:30.10:0,30,381	1/1:10,11:21:44.76:632,45,0	1/1:6,5:11:23.82:366,24,0	1/1:27,8:31:76.17:1021,76,0	1/1:10,8:18:32.56:428,33,0	0/0:24,0:24:48.14:0,48,597	0/0:25,0:25:63.13:0,63,760	0/0:22,0:22:32.19:0,32,649	1/1:19,9:29:34.39:627,34,0	1/1:10,12:22:50.72:707,51,0	1/1:13,7:20:46.90:656,47,0	0/0:34,0:34:90.25:0,90,1107	1/1:5,1:6:13.86:175,14,0	1/1:6,2:8:8.98:100,9,0	1/1:7,0:7:8.69:86,9,0	1/1:14,11:25:39.97:574,40,0	0/0:1,1:2:0:0,0,0	1/1:15,13:28:56.44:746,56,0	1/1:14,12:26:49.25:685,49,0	1/1:2,3:5:8.73:80,9,0	1/1:10,18:28:51.80:914,52,0	1/1:19,16:34:49.41:1102,49,0	1/1:14,18:33:77.59:1104,78,0	1/1:7,9:16:35.77:433,36,0
chr10	102528346	.	T	TTG	2473.54	PASS	AB=0.995;AC=31;AF=0.554;AN=56;BaseQRankSum=15.197;DP=632;FS=1.189;HRun=0;HaplotypeScore=274.9867;InbreedingCoeff=0.5589;MQ=63.69;MQ0=13;MQRankSum=-15.132;QD=6.72;ReadPosRankSum=0.791;VQSLOD=2.9358;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:15.88:0,16,736	0/0:11,0:11:33.09:0,33,503	0/0:51,0:25:56.89:0,57,804	0/0:61,0:29:17.54:0,18,553	0/0:13,0:13:35.97:0,36,560	1/1:21,0:21:41.15:219,41,0	0/1:12,0:12:18.31:46,0,18	0/1:35,1:31:46.44:46,0,182	1/1:18,1:19:34.53:207,35,0	0/0:21,0:21:57.19:0,57,925	0/0:27,0:27:75.26:0,75,1210	0/0:20,0:20:60.19:0,60,950	1/1:28,0:28:9.71:211,10,0	1/1:21,1:22:38.12:194,38,0	1/1:23,0:23:22.66:196,23,0	0/0:32,0:32:96.33:0,96,1561	1/1:5,0:5:8.19:35,8,0	0/0:6,0:6:1.77:0,2,26	0/1:6,0:6:28.80:29,0,53	1/1:21,2:23:32.93:226,33,0	1/1:1,1:2:3.01:31,3,0	1/1:32,0:32:49.26:270,49,0	1/1:23,0:23:36.59:182,37,0	1/1:5,0:5:8.72:49,9,0	1/1:28,0:28:24.86:266,25,0	0/1:37,0:36:89.40:139,0,89	0/1:33,0:33:19.34:248,0,19	1/1:13,0:13:19.76:86,20,0
chr10	102528350	.	T	TTGCTC	10369.92	PASS	AB=0.809;AC=22;AF=0.393;AN=56;BaseQRankSum=9.404;DP=658;FS=0.753;HRun=0;HaplotypeScore=288.2637;InbreedingCoeff=-0.3847;MQ=63.03;MQ0=16;MQRankSum=-11.191;QD=25.35;ReadPosRankSum=-2.841;VQSLOD=3.1871;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,2:24:99:201,0,793	0/0:10,0:10:27.06:0,27,512	0/0:61,0:29:45.37:0,45,812	0/0:64,0:28:44.51:0,45,682	0/0:15,0:15:41.77:0,42,812	0/1:15,6:21:24.65:808,0,25	0/1:10,3:13:71.62:72,0,200	0/1:30,9:37:99:999,0,607	0/1:18,1:20:99:716,0,101	0/0:20,0:20:51.17:0,51,1065	0/0:27,0:27:72.25:0,72,1552	0/0:20,0:20:60.21:0,60,1305	0/1:19,5:26:99:1048,0,117	0/1:13,6:19:99:562,0,184	0/1:15,9:26:22.57:1028,0,23	0/0:32,0:32:90.31:0,90,1902	0/1:3,3:6:13.20:308,0,13	0/1:3,0:5:19.56:84,0,20	0/1:8,0:8:99:206,0,136	0/1:18,1:19:99:330,0,158	1/1:2,0:2:3.01:70,3,0	0/1:25,6:34:99:696,0,242	0/1:20,5:26:99:396,0,134	1/1:9,0:9:9.03:210,9,0	0/1:21,2:25:99:276,0,270	0/1:28,8:39:99:1328,0,565	0/1:24,4:30:99:662,0,347	0/1:9,3:13:99:369,0,143
chr10	102528373	.	T	TC	2326.16	PASS	AB=0.759;AC=19;AF=0.339;AN=56;BaseQRankSum=11.632;DP=537;FS=11.805;HRun=1;HaplotypeScore=208.9931;InbreedingCoeff=-0.1550;MQ=57.02;MQ0=31;MQRankSum=-7.547;QD=9.94;ReadPosRankSum=2.286;VQSLOD=0.3599;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,3:19:99:186,0,160	0/0:9,0:9:27.08:0,27,359	0/0:64,0:24:55.16:0,55,753	0/0:65,0:18:29.91:0,30,392	0/0:18,0:18:41.57:0,42,546	0/1:9,8:17:59.66:286,0,60	0/0:4,0:4:2.97:0,3,20	0/0:29,0:22:38.76:0,39,779	0/1:7,7:12:23.14:213,0,23	0/0:28,0:26:47.08:0,47,817	0/0:23,0:23:60.12:0,60,769	0/0:19,0:18:50.99:0,51,657	0/1:10,9:19:99:292,0,209	0/1:7,2:9:63.77:90,0,64	0/1:17,7:24:87.50:296,0,88	0/0:28,0:27:81.22:0,81,1085	0/1:6,1:7:23.71:24,0,128	0/1:3,3:6:64.26:64,0,70	0/0:8,0:7:16.48:0,16,243	1/1:5,4:9:10.08:128,10,0	0/0:5,0:4:5:0,5,26	0/1:17,4:21:61.17:61,0,104	1/1:13,5:18:1.45:260,1,0	0/1:4,3:7:29.84:84,0,30	1/1:8,5:13:1.42:254,1,0	0/1:25,5:26:77.53:78,0,656	0/1:7,6:13:99:166,0,117	0/1:4,2:6:5.66:6,0,123
chr10	102528375	.	CTGTGTGTGTGTGTGTGTGTGTGTG	C	6361.53	PASS	AB=0.924;AC=25;AF=0.463;AN=54;BaseQRankSum=7.908;DP=532;FS=2.920;HRun=0;HaplotypeScore=346.8992;InbreedingCoeff=0.7369;MQ=57.12;MQ0=35;MQRankSum=-6.567;QD=30.29;ReadPosRankSum=-0.672;VQSLOD=2.8043;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:20:19:0,19,1306	0/0:8,0:8:15.05:0,15,1224	0/0:62,0:24:11.97:0,12,191	0/0:62,0:17:9.03:0,9,275	0/0:17,0:18:43.06:0,43,2689	1/1:15,1:17:15.04:568,15,0	./.	1/1:28,0:21:14.85:126,15,0	1/1:11,3:12:22.90:862,23,0	0/0:27,0:25:42.14:0,42,2758	0/0:21,0:22:39.13:0,39,3017	0/0:16,0:18:21.54:0,22,1570	0/1:17,2:19:23.71:668,0,24	1/1:8,1:9:6.02:242,6,0	1/1:19,3:24:24.08:770,24,0	0/0:24,0:26:63.22:0,63,3756	0/0:7,0:7:12.51:0,13,410	0/0:6,0:6:6.02:0,6,224	1/1:6,0:7:6.02:335,6,0	1/1:8,0:9:12.02:515,12,0	0/1:6,0:4:0:0,0,0	1/1:18,2:21:21.07:809,21,0	1/1:13,6:18:18.06:785,18,0	1/1:4,3:7:8.31:121,8,0	1/1:13,1:13:7.87:182,8,0	0/0:25,0:26:45.11:0,45,1573	0/1:11,0:13:7.37:378,0,7	0/0:5,0:6:12.04:0,12,305
chr10	102528383	.	G	GC	87.44	PASS	AB=0.746;AC=11;AF=0.204;AN=54;BaseQRankSum=9.199;DP=509;FS=3.188;HRun=0;HaplotypeScore=210.2175;InbreedingCoeff=-0.0611;MQ=50.20;MQ0=38;MQRankSum=-5.463;QD=0.58;ReadPosRankSum=-4.523;VQSLOD=1.8569;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:18.32:0,18,184	0/0:9,0:9:21.07:0,21,291	0/0:48,0:19:2.07:0,2,452	0/0:46,0:12:21.30:0,21,286	0/0:21,0:21:54.06:0,54,692	0/1:9,8:17:33.39:33,0,35	./.	0/0:22,0:16:48.16:0,48,659	0/1:9,6:12:12.08:12,0,81	0/0:29,0:26:69.13:0,69,906	0/0:22,0:22:54.11:0,54,708	0/0:21,0:20:47.96:0,48,575	0/1:11,8:19:6.78:7,0,244	0/1:7,2:9:13.64:14,0,41	0/1:20,5:24:38.38:38,0,63	0/0:29,0:27:75.06:0,75,969	0/0:7,1:7:2.95:0,3,88	0/0:4,2:6:6.45:0,6,120	0/0:9,0:7:20.41:0,20,230	0/1:7,4:9:9.09:9,0,56	0/0:7,0:4:3.01:0,3,31	0/0:17,4:21:10.22:0,10,105	1/1:14,5:18:16.48:64,16,0	0/1:5,3:7:3.38:3,0,54	0/1:11,3:12:23.88:32,0,24	0/0:23,5:24:44.70:0,45,513	0/1:7,6:13:15.64:16,0,108	0/0:4,0:6:12.30:0,12,132
chr10	102528437	.	A	AAGAG	9422.46	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=11.024;DP=474;FS=74.896;HRun=0;HaplotypeScore=201.0040;InbreedingCoeff=0.9556;MQ=55.73;MQ0=10;MQRankSum=-12.113;QD=38.46;ReadPosRankSum=-1.235;VQSLOD=2.1892;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:86.71:0,87,1347	0/0:9,0:9:16.81:0,17,316	0/0:38,0:25:42.31:0,42,732	0/0:54,0:30:57.24:0,57,893	0/0:17,0:17:48.16:0,48,834	1/1:12,0:13:33.07:473,33,0	1/1:10,0:10:30.10:583,30,0	1/1:18,0:18:45.05:763,45,0	1/1:15,0:15:29.41:501,29,0	0/0:21,0:21:50.69:0,51,793	0/0:9,0:9:12.04:0,12,212	0/0:25,0:25:69.20:0,69,1107	1/1:14,0:14:26.94:435,27,0	1/1:18,0:18:42.07:727,42,0	1/1:14,0:14:30.10:557,30,0	0/0:25,0:25:69.24:0,69,1203	1/1:2,6:7:17.55:394,18,0	1/1:2,6:8:19.31:425,19,0	1/1:9,0:9:27.09:424,27,0	1/1:17,0:16:27.81:393,28,0	1/1:6,0:6:9.03:154,9,0	1/1:18,0:18:28.73:532,29,0	1/1:18,0:18:30.93:591,31,0	1/1:8,0:8:5.98:112,6,0	1/1:10,0:10:27.07:391,27,0	1/1:11,15:26:69.16:1449,69,0	1/1:11,0:10:27.06:348,27,0	1/1:2,2:4:8.98:173,9,0
chr10	102528439	.	G	GAGAA	11405.46	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=10.606;DP=479;FS=69.900;HRun=0;HaplotypeScore=193.9859;InbreedingCoeff=0.8885;MQ=55.80;MQ0=5;MQRankSum=-12.457;QD=45.44;ReadPosRankSum=-0.724;VQSLOD=2.6951;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:87.29:0,87,1537	0/0:9,0:9:26.93:0,27,405	0/0:35,0:25:51.17:0,51,891	0/0:51,0:30:67.17:0,67,1030	0/0:17,0:17:48.16:0,48,910	1/1:8,5:13:34.93:656,35,0	1/1:4,6:10:30.10:777,30,0	1/1:5,11:17:51.10:1121,51,0	1/1:10,5:15:36.28:718,36,0	0/0:23,0:22:59.99:0,60,997	0/0:9,0:9:21.03:0,21,302	0/0:27,0:27:75.23:0,75,1318	1/1:9,5:14:28.87:586,29,0	1/1:11,7:18:47.78:1002,48,0	1/1:7,7:14:32.76:760,33,0	0/0:25,0:25:75.23:0,75,1358	1/1:8,0:7:8.10:272,8,0	1/1:9,0:9:2.66:277,3,0	1/1:9,4:11:30.10:684,30,0	1/1:12,5:16:35.92:590,36,0	1/1:2,6:8:5.09:206,5,0	1/1:10,9:19:39.39:754,39,0	1/1:9,9:18:35.34:783,35,0	1/1:4,4:8:8.99:166,9,0	1/1:6,3:9:27.09:571,27,0	1/1:26,0:26:2.48:895,2,0	1/1:9,1:10:29.55:484,30,0	1/1:4,0:4:6.01:104,6,0
chr10	102528444	.	AGAAAG	A	1298.49	PASS	AB=0.748;AC=15;AF=0.268;AN=56;BaseQRankSum=8.978;DP=505;FS=17.559;HRun=0;HaplotypeScore=233.3061;InbreedingCoeff=0.0560;MQ=58.17;MQ0=4;MQRankSum=-6.802;QD=6.87;ReadPosRankSum=-3.476;VQSLOD=0.9113;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:93.32:0,93,2756	0/0:9,0:9:27.09:0,27,800	0/0:32,0:23:59.63:0,60,1474	0/0:60,0:33:67.79:0,68,1742	0/0:19,0:19:51.18:0,51,1641	0/1:7,5:12:5.74:203,0,6	0/1:7,4:11:17.16:17,0,39	0/0:20,0:19:31.62:0,32,232	0/1:11,4:15:14.98:120,0,15	0/0:24,0:23:63.22:0,63,1862	0/0:9,0:9:21.07:0,21,597	0/0:26,0:26:75.26:0,75,2455	0/1:9,4:13:71.87:72,0,107	0/1:10,10:20:56.01:87,0,56	0/1:9,6:15:14.27:72,0,14	0/0:25,0:25:75.26:0,75,2431	0/0:9,0:8:24.07:0,24,533	0/0:9,0:9:18.50:0,18,346	0/1:15,3:16:99:114,0,293	1/1:8,9:16:2.15:167,2,0	0/0:9,0:9:5.14:0,5,42	0/1:13,5:18:0.42:62,0,0	0/1:14,6:20:30.07:40,0,30	0/1:5,2:7:13.14:13,0,13	1/1:5,6:11:16.44:229,16,0	0/0:27,0:27:80.83:0,81,1520	0/1:6,6:11:7.47:262,0,7	0/0:4,0:4:11.99:0,12,207
chr10	102528447	.	AAG	A	2142.96	PASS	AB=0.898;AC=18;AF=0.321;AN=56;BaseQRankSum=8.570;DP=502;FS=17.910;HRun=0;HaplotypeScore=201.5778;InbreedingCoeff=-0.0520;MQ=59.66;MQ0=3;MQRankSum=-10.048;QD=10.16;ReadPosRankSum=-8.011;VQSLOD=0.4656;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:90.27:0,90,1401	0/0:9,0:9:27.03:0,27,407	0/0:31,0:21:37.33:0,37,542	0/0:62,0:35:58.88:0,59,847	0/0:20,0:20:54.13:0,54,855	0/1:12,0:12:22.11:164,0,22	0/1:10,1:11:48.04:48,0,106	0/1:16,3:18:48.16:48,0,476	0/1:9,4:13:84.25:126,0,84	0/0:24,0:23:54.63:0,55,871	0/0:8,0:8:18.06:0,18,309	0/0:26,0:26:72.25:0,72,1246	0/1:10,2:12:82.89:83,0,103	1/1:18,2:20:27.29:393,27,0	0/1:13,2:15:38.58:206,0,39	0/0:26,0:26:75.26:0,75,1284	0/0:11,0:10:27.09:0,27,419	0/0:10,0:10:21.34:0,21,256	0/1:16,2:16:99:131,0,327	0/1:16,1:16:11.26:220,0,11	0/1:8,0:8:30.67:45,0,31	1/1:14,2:16:3.78:191,4,0	0/1:18,2:20:72.23:190,0,72	0/1:6,1:7:13.55:36,0,14	1/1:9,2:11:1.03:214,1,0	0/0:26,0:26:66.04:0,66,968	0/1:10,2:11:11.48:216,0,11	0/0:4,0:4:9.03:0,9,136
chr10	102528909	.	AACCTCCAC	A	25223.31	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=20.188;DP=728;FS=8.027;HRun=0;HaplotypeScore=222.1903;InbreedingCoeff=0.9980;MQ=90.56;MQ0=1;MQRankSum=-21.754;QD=74.41;ReadPosRankSum=4.379;VQSLOD=4.0419;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:65:99:0,196,8764	0/0:11,0:11:33.11:0,33,1482	0/0:27,0:27:78.04:0,78,3409	0/0:43,0:43:99:0,126,4774	0/0:34,0:34:99:0,102,4083	1/1:0,29:29:84.29:2466,84,0	1/1:0,16:16:48.16:1445,48,0	1/1:0,20:20:60.21:1798,60,0	1/1:0,31:31:81.07:2451,81,0	0/0:32,0:32:96.32:0,96,4192	0/0:21,0:21:63.21:0,63,2715	0/0:32,0:32:93.31:0,93,3988	1/1:0,31:31:72.22:2139,72,0	1/1:0,19:19:45.15:1360,45,0	1/1:0,30:30:78.27:2360,78,0	0/0:43,0:42:99:0,126,5456	0/0:20,0:20:60.21:0,60,2650	0/0:22,0:22:66.23:0,66,2973	1/1:0,9:9:21.04:567,21,0	1/1:0,24:24:60.21:1761,60,0	1/1:0,11:11:24.08:605,24,0	1/1:1,30:31:78.27:2268,78,0	1/1:0,18:18:36.12:1089,36,0	1/1:0,17:17:36.12:1089,36,0	1/1:0,23:23:53.90:1594,54,0	0/0:33,0:33:96.33:0,96,4262	1/1:0,29:29:75.26:2232,75,0	0/0:6,0:6:18.06:0,18,833
chr10	102529508	.	T	TG	4071.83	PASS	AB=0.714;AC=29;AF=0.518;AN=56;BaseQRankSum=18.582;DP=636;FS=3.006;HRun=2;HaplotypeScore=132.7352;InbreedingCoeff=0.9063;MQ=83.12;MQ0=0;MQRankSum=-3.639;QD=12.26;ReadPosRankSum=1.436;VQSLOD=2.6406;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,1803	0/0:8,0:8:18.06:0,18,222	0/0:22,0:22:60.02:0,60,660	0/0:20,0:20:50.96:0,51,526	0/0:9,0:9:21.06:0,21,260	1/1:19,0:19:30.66:198,31,0	1/1:28,1:29:50.33:344,50,0	1/1:29,0:29:70.77:407,71,0	1/1:22,0:22:2.33:154,2,0	0/0:20,0:20:54.17:0,54,669	0/0:5,0:5:15.05:0,15,186	0/0:36,0:36:99:0,108,1314	1/1:21,1:22:55.21:332,55,0	1/1:30,0:30:32.07:243,32,0	1/1:20,0:20:54.03:260,54,0	0/0:38,0:38:99:0,108,1312	0/0:34,0:34:99:0,99,1225	0/0:32,0:32:87.25:0,87,1062	1/1:12,1:13:27.39:142,27,0	1/1:6,0:6:11.82:49,12,0	1/1:45,4:49:99:674,112,0	1/1:9,0:9:11.97:69,12,0	0/1:3,2:5:4.67:71,0,5	1/1:43,2:44:99:713,116,0	1/1:8,2:10:25.73:194,26,0	0/0:24,0:24:72.23:0,72,892	1/1:22,2:23:46.67:223,47,0	0/0:6,0:6:18.03:0,18,198
chr10	102529749	.	G	GTGAAGA	2885.55	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=4.399;DP=350;FS=63.655;HRun=0;HaplotypeScore=95.9868;InbreedingCoeff=0.8282;MQ=76.36;MQ0=8;MQRankSum=-4.839;QD=20.46;ReadPosRankSum=-1.660;VQSLOD=0.4502;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:59.80:0,60,1075	0/0:3,0:3:9.01:0,9,144	0/0:34,0:19:47.16:0,47,689	0/0:26,0:20:52.08:0,52,676	0/0:9,0:9:27.07:0,27,525	1/1:7,0:7:21.07:393,21,0	1/1:0,0:7:3.01:88,3,0	1/1:9,0:7:17.99:259,18,0	1/1:0,0:8:3.01:92,3,0	0/0:5,0:5:15.04:0,15,278	0/0:8,0:8:24.04:0,24,435	0/0:13,0:13:39.09:0,39,668	1/1:9,0:9:27.03:351,27,0	1/1:0,0:13:3.01:100,3,0	1/1:0,7:9:6.02:167,6,0	0/0:9,0:9:26.99:0,27,390	0/0:35,0:34:87.52:0,88,1782	0/0:20,0:20:60.02:0,60,1028	1/1:10,0:10:24.74:300,25,0	1/1:7,0:7:18.03:274,18,0	1/1:3,0:8:3.01:34,3,0	1/1:11,0:11:29.96:367,30,0	1/1:0,0:6:6.02:90,6,0	1/1:1,17:21:9.03:217,9,0	1/1:7,0:7:21:273,21,0	0/0:19,0:18:51.15:0,51,996	1/1:0,0:7:2.84:90,3,0	0/0:6,0:6:18.06:0,18,425
chr10	102529950	.	GGGA	G	88.65	PASS	AB=0.906;AC=4;AF=0.087;AN=46;BaseQRankSum=2.312;DP=325;FS=1.473;HRun=0;HaplotypeScore=39.9388;InbreedingCoeff=0.1668;MQ=24.17;MQ0=64;MQRankSum=-2.606;QD=3.17;ReadPosRankSum=-1.539;VQSLOD=1.0982;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:19:50.69:0,51,704	0/0:6,0:4:8.92:0,9,76	0/0:44,0:1:1.82:0,2,5	0/0:75,0:5:12.01:0,12,161	0/0:7,0:4:2.69:0,3,50	0/0:5,0:2:4.81:0,5,29	0/0:3,0:2:0.47:0,0,1	0/0:12,0:4:6.02:0,6,84	./.	0/0:6,0:3:5.05:0,5,63	0/0:5,0:3:3.01:0,3,52	0/0:8,0:6:18.04:0,18,247	0/0:2,0:1:3.01:0,3,50	0/0:2,0:1:2.88:0,3,15	0/1:6,1:4:28.64:30,0,29	0/0:13,0:12:20.36:0,20,359	0/0:16,0:13:21.22:0,21,297	0/0:11,0:10:21.07:0,21,352	./.	./.	0/0:17,2:8:11.35:0,11,89	./.	0/0:5,0:2:2.74:0,3,13	0/0:9,0:5:2.81:0,3,34	1/1:4,2:4:9.03:107,9,0	0/1:14,1:11:53.51:54,0,337	./.	0/0:6,0:5:12.04:0,12,159
chr10	102529977	.	GGAGGGA	G	834	PASS	AB=0.926;AC=25;AF=0.500;AN=50;BaseQRankSum=4.031;DP=368;FS=4.602;HRun=0;HaplotypeScore=57.4357;InbreedingCoeff=0.4518;MQ=30.27;MQ0=45;MQRankSum=-4.242;QD=4.74;ReadPosRankSum=-0.894;VQSLOD=0.7864;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:48.16:0,48,1412	./.	1/1:51,0:2:0.89:2,1,0	0/0:92,0:11:21.07:0,21,436	0/0:2,0:1:3.01:0,3,77	./.	0/1:6,0:5:2.92:5,0,3	1/1:13,0:6:2.94:18,3,0	0/0:5,0:4:5.99:0,6,49	0/0:7,0:5:12.04:0,12,386	0/0:5,0:3:6.02:0,6,201	0/0:13,0:11:22.98:0,23,572	0/0:3,0:2:3:0,3,26	1/1:5,0:3:0.17:0,0,0	1/1:8,0:5:0.86:5,1,0	0/0:12,0:11:21.07:0,21,439	1/1:10,2:11:12.04:208,12,0	1/1:12,2:13:12.01:219,12,0	0/0:14,0:2:0.89:0,1,2	1/1:7,0:6:3.01:34,3,0	0/1:20,0:12:10.53:11,0,25	1/1:5,0:5:5.91:53,6,0	1/1:4,0:3:2.80:36,3,0	1/1:9,0:7:1.55:4,2,0	0/0:9,0:6:9.30:0,9,104	1/1:13,2:11:14.58:208,15,0	./.	0/1:5,2:6:22.26:183,0,22
chr10	102529984	.	GAGGGA	G	199.81	PASS	AB=0.948;AC=9;AF=0.167;AN=54;BaseQRankSum=4.602;DP=327;FS=9.136;HRun=0;HaplotypeScore=59.5684;InbreedingCoeff=-0.0066;MQ=35.50;MQ0=40;MQRankSum=-1.411;QD=3.03;ReadPosRankSum=1.667;VQSLOD=0.3219;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:56.93:0,57,1640	./.	0/0:47,0:2:0.31:0,0,17	0/0:81,0:12:17.90:0,18,613	0/0:1,0:1:3.01:0,3,98	0/1:2,0:1:0:0,0,0	0/1:5,2:6:71.77:77,0,72	0/0:8,0:5:7.27:0,7,80	0/0:5,0:4:6.02:0,6,127	0/0:5,0:4:12.04:0,12,400	0/0:6,0:5:12.04:0,12,354	0/0:11,0:11:30.08:0,30,786	0/0:4,0:3:6.02:0,6,103	0/0:4,0:3:0.40:0,0,2	0/1:5,1:4:29.27:38,0,29	0/0:10,0:9:27.09:0,27,746	0/1:9,0:8:28.55:45,0,29	0/1:15,0:14:51.77:52,0,97	0/0:11,0:1:3.01:0,3,41	0/0:6,0:5:1.82:0,2,5	0/0:19,2:13:9.55:0,10,86	0/0:5,0:5:3.82:0,4,25	0/0:4,0:3:0.89:0,1,2	1/1:4,3:6:3.01:42,3,0	0/0:9,0:6:17.06:0,17,272	0/1:13,0:9:36.70:37,0,159	0/0:1,0:1:3.01:0,3,37	0/1:7,0:7:31.57:32,0,105
chr10	102529992	.	GGGA	G	406.60	PASS	AB=0.884;AC=21;AF=0.404;AN=52;BaseQRankSum=4.126;DP=292;FS=6.197;HRun=0;HaplotypeScore=53.2517;InbreedingCoeff=0.1243;MQ=38.66;MQ0=32;MQRankSum=-3.966;QD=3.60;ReadPosRankSum=0.950;VQSLOD=0.5941;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:57.17:0,57,1194	./.	0/0:37,0:5:7.57:0,8,76	0/0:66,0:13:32.42:0,32,438	0/0:2,0:2:6.02:0,6,103	1/1:1,1:1:0.47:1,0,0	0/1:5,1:5:21.66:43,0,22	1/1:5,0:2:2.68:11,3,0	0/0:3,1:3:5.80:0,6,40	0/0:5,0:4:12.04:0,12,272	0/0:5,0:5:15.05:0,15,325	0/0:12,0:12:29.59:0,30,541	0/0:3,0:2:5.55:0,6,26	0/0:2,2:3:0.47:0,0,1	0/1:3,1:3:10.83:29,0,11	0/0:11,0:10:30.10:0,30,570	0/1:11,0:10:26.98:27,0,77	0/1:13,0:12:35.40:35,0,77	1/1:12,0:2:0.89:2,1,0	1/1:1,4:5:3.01:34,3,0	1/1:18,2:14:1.92:82,2,0	1/1:5,0:5:4.68:24,5,0	1/1:2,1:3:2.95:19,3,0	0/0:6,0:5:3.84:0,4,13	0/1:6,2:6:39.33:41,0,39	0/1:8,2:8:62.88:118,0,63	./.	0/1:8,1:9:70.38:86,0,70
chr10	102530053	.	AG	A	1214.43	PASS	AB=0.917;AC=27;AF=0.519;AN=52;BaseQRankSum=4.848;DP=197;FS=11.006;HRun=6;HaplotypeScore=42.1022;InbreedingCoeff=0.6678;MQ=64.45;MQ0=7;MQRankSum=-3.070;QD=15.77;ReadPosRankSum=2.522;VQSLOD=1.9672;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,1:11:2.03:2,0,307	0/0:3,0:3:3.01:0,3,39	0/0:29,0:9:15.73:0,16,146	0/0:33,1:8:6.17:0,6,90	0/0:6,0:5:12.04:0,12,157	1/1:1,3:4:9.02:96,9,0	1/1:2,7:8:14.87:130,15,0	0/0:8,0:8:14.99:0,15,197	1/1:0,1:1:3.01:32,3,0	0/0:5,0:5:9.02:0,9,107	0/0:3,0:3:3.01:0,3,39	0/0:6,0:6:11.95:0,12,106	1/1:1,4:5:9.02:97,9,0	./.	1/1:0,3:3:9.02:96,9,0	0/0:5,0:5:6:0,6,51	1/1:3,6:8:21.05:225,21,0	1/1:1,6:7:18.02:183,18,0	0/0:4,0:3:9.02:0,9,104	./.	0/0:12,1:12:5.89:0,6,53	1/1:3,3:6:9.02:96,9,0	1/1:1,2:3:5.92:64,6,0	1/1:2,2:3:3.01:32,3,0	1/1:1,3:4:5.97:63,6,0	1/1:1,6:7:18.04:185,18,0	0/0:1,0:1:3.01:0,3,39	1/1:1,3:4:9.02:97,9,0
chr10	102530082	.	A	AGAG	724.69	PASS	AB=1.000;AC=17;AF=0.327;AN=52;BaseQRankSum=3.059;DP=289;FS=6.781;HRun=0;HaplotypeScore=61.4037;InbreedingCoeff=0.3759;MQ=40.06;MQ0=38;MQRankSum=-3.551;QD=7.39;ReadPosRankSum=2.126;VQSLOD=1.2195;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:33.09:0,33,452	0/0:6,0:4:6.02:0,6,87	0/0:33,0:6:6.02:0,6,84	0/0:47,0:5:2.81:0,3,47	0/0:8,0:5:15.05:0,15,208	0/1:10,0:9:48.59:49,0,51	0/1:13,0:11:26.25:26,0,60	0/0:15,0:12:11.97:0,12,160	0/1:6,0:6:27.40:27,0,45	0/0:7,0:7:12.04:0,12,174	0/1:7,0:7:2.96:3,0,96	0/0:4,0:3:9.02:0,9,114	0/0:8,0:7:5.67:0,6,29	./.	1/1:10,0:8:2:22,2,0	0/0:4,0:4:9:0,9,93	1/1:9,1:8:8.71:104,9,0	1/1:6,1:6:11.97:130,12,0	0/0:6,0:5:9:0,9,106	0/0:6,0:5:2.96:0,3,20	0/1:11,0:9:0:0,0,0	0/0:10,0:7:5.92:0,6,39	1/1:6,0:5:3.01:34,3,0	./.	0/0:7,0:6:9.08:0,9,50	1/1:10,2:12:20.65:272,21,0	0/0:3,0:1:2.80:0,3,13	1/1:3,3:6:12.04:215,12,0
chr10	102530097	.	GGGA	G	624.19	PASS	AB=0.934;AC=16;AF=0.296;AN=54;BaseQRankSum=5.039;DP=369;FS=6.852;HRun=0;HaplotypeScore=65.9509;InbreedingCoeff=0.1747;MQ=42.31;MQ0=48;MQRankSum=-4.829;QD=5.78;ReadPosRankSum=-0.479;VQSLOD=1.1052;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:38.21:0,38,1039	0/0:7,0:5:12.04:0,12,225	0/0:46,0:7:15.39:0,15,165	0/0:55,0:8:18.68:0,19,268	0/0:8,0:6:15.05:0,15,318	0/1:14,0:13:60.81:61,0,193	0/1:13,1:11:5.64:6,0,119	0/0:24,0:20:23.90:0,24,520	0/1:8,0:8:30.28:30,0,106	0/0:10,0:9:21.06:0,21,427	0/0:9,0:9:19.51:0,20,386	0/0:7,0:6:18.06:0,18,359	0/0:15,0:13:2.70:0,3,124	0/0:6,0:6:1.74:0,2,26	0/0:17,1:14:0.58:0,1,138	0/0:8,0:7:17.95:0,18,318	1/1:6,1:6:11.14:162,11,0	0/1:5,3:7:3.77:112,0,4	0/1:13,1:11:10.71:11,0,303	1/1:7,0:6:0.32:31,0,0	0/0:13,0:8:2.87:0,3,18	0/1:11,0:8:27.89:28,0,100	1/1:5,0:4:3.01:34,3,0	./.	0/1:7,0:6:18.44:18,0,54	0/1:6,1:7:0.65:93,0,1	0/0:7,0:4:9.02:0,9,115	1/1:6,0:6:12.04:194,12,0
chr10	102530098	.	G	GA	145.72	PASS	AB=0.950;AC=10;AF=0.179;AN=56;BaseQRankSum=3.932;DP=373;FS=5.177;HRun=0;HaplotypeScore=67.1221;InbreedingCoeff=0.1994;MQ=42.05;MQ0=48;MQRankSum=-3.854;QD=1.82;ReadPosRankSum=0.435;VQSLOD=1.6458;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:51.16:0,51,696	0/0:8,0:6:9.03:0,9,126	0/0:47,0:7:15.03:0,15,170	0/0:56,1:8:17.41:0,17,191	0/0:6,1:6:15.05:0,15,207	0/1:12,2:13:55.97:56,0,202	0/0:14,0:11:12.91:0,13,138	0/0:23,1:20:38.72:0,39,498	0/0:8,0:8:13.81:0,14,150	0/0:10,0:9:21.07:0,21,293	0/0:9,0:9:23.56:0,24,296	0/0:7,0:6:18.05:0,18,234	0/0:14,1:13:19.74:0,20,223	0/0:7,0:7:3.01:0,3,41	0/1:17,1:14:22.44:22,0,250	0/0:8,0:7:18.01:0,18,215	0/1:7,0:6:12.88:60,0,13	0/1:8,0:7:45.27:45,0,71	0/0:14,0:11:24.52:0,25,309	0/0:7,0:6:2.13:0,2,7	1/1:15,0:10:2.04:6,2,0	0/0:9,2:8:14.24:0,14,155	0/0:3,2:4:1.81:0,2,5	0/1:6,1:2:0:0,0,0	0/0:7,0:6:7.37:0,7,108	0/1:7,0:7:26.96:27,0,53	0/0:7,0:4:9.03:0,9,125	1/1:4,0:4:9.81:61,10,0
chr10	102530103	.	GGGA	G	373.42	PASS	AB=0.980;AC=21;AF=0.375;AN=56;BaseQRankSum=7.656;DP=400;FS=8.425;HRun=0;HaplotypeScore=72.3719;InbreedingCoeff=-0.0438;MQ=39.48;MQ0=53;MQRankSum=-7.363;QD=1.96;ReadPosRankSum=0.148;VQSLOD=0.6346;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:63.20:0,63,1252	0/0:6,0:6:4.21:0,4,205	0/0:48,0:6:9.24:0,9,108	0/0:54,0:6:15.52:0,16,354	0/0:9,0:7:18.06:0,18,341	0/1:12,1:13:60.57:61,0,182	0/1:16,0:12:15.06:15,0,86	0/1:25,0:21:6.47:6,0,265	0/1:8,1:8:28.13:35,0,28	0/0:11,0:10:24.08:0,24,500	0/0:10,0:9:19.61:0,20,453	0/0:8,0:8:24.08:0,24,526	0/1:16,0:14:23.31:23,0,90	1/1:10,0:9:4.94:15,5,0	0/1:19,1:15:42.73:43,0,46	0/0:10,0:8:18.06:0,18,373	1/1:6,1:5:10.72:86,11,0	0/1:9,0:7:40.96:41,0,51	0/1:16,0:12:22.86:23,0,247	1/1:6,2:6:0.32:31,0,0	0/0:16,0:10:2.07:0,2,16	0/1:11,0:8:29.70:30,0,84	1/1:4,1:4:3.01:33,3,0	1/1:11,0:6:1.99:6,2,0	0/1:8,0:7:28.43:28,0,31	0/1:7,0:7:36.86:57,0,37	0/0:8,0:6:7.38:0,7,84	0/0:4,0:3:0.30:0,0,4
chr10	102530106	.	AGAG	A	1187.93	PASS	AB=0.888;AC=23;AF=0.426;AN=54;BaseQRankSum=4.513;DP=410;FS=13.316;HRun=0;HaplotypeScore=69.8690;InbreedingCoeff=0.0820;MQ=39.23;MQ0=58;MQRankSum=-5.965;QD=5.74;ReadPosRankSum=-1.362;VQSLOD=0.1721;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:57.19:0,57,1079	0/0:6,0:6:9.01:0,9,148	0/0:49,0:8:15.52:0,16,216	0/0:60,0:6:14.98:0,15,311	0/0:10,0:7:15.05:0,15,285	0/1:10,2:12:38.91:87,0,39	0/1:16,1:13:63.40:63,0,71	0/1:20,6:22:54.90:246,0,55	1/1:7,2:8:8.66:76,9,0	0/0:10,0:9:21.07:0,21,422	0/0:9,0:9:16.56:0,17,369	0/0:9,0:9:27.09:0,27,524	0/1:12,2:12:41.75:108,0,42	1/1:9,1:9:11.74:118,12,0	0/1:20,1:15:25.75:72,0,26	0/0:10,0:8:15.05:0,15,310	1/1:7,0:5:2.80:50,3,0	0/1:10,0:7:2.10:37,0,2	0/1:17,1:13:77.97:78,0,144	0/0:7,1:6:2.70:0,3,6	0/1:13,3:10:12.34:31,0,12	0/1:6,3:7:28.29:67,0,28	./.	1/1:11,0:6:2.64:14,3,0	0/1:7,1:7:11.28:38,0,11	1/1:5,3:7:17.97:221,18,0	0/1:7,1:6:7.35:7,0,21	1/1:1,1:1:3.01:44,3,0
chr10	102530114	.	AGGAGGAG	A	1587.04	PASS	AB=0.945;AC=17;AF=0.315;AN=54;BaseQRankSum=3.689;DP=433;FS=21.478;HRun=0;HaplotypeScore=91.5932;InbreedingCoeff=-0.0099;MQ=37.85;MQ0=57;MQRankSum=-2.364;QD=8.22;ReadPosRankSum=-4.110;VQSLOD=-0.7465;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:24:63.22:0,63,2050	0/0:6,0:6:9.03:0,9,232	0/0:48,0:7:15.49:0,15,221	0/0:70,0:6:15.05:0,15,430	0/0:10,0:7:18.06:0,18,520	0/1:11,0:11:40.30:40,0,114	0/1:17,2:14:71.64:185,0,72	0/1:22,3:19:84.76:85,0,213	0/1:8,0:7:15.91:53,0,16	0/0:11,0:9:24.08:0,24,607	0/0:11,0:10:21.07:0,21,728	0/0:11,0:11:33.11:0,33,1028	0/1:13,0:11:43.43:43,0,132	0/1:10,2:11:16.16:169,0,16	0/1:19,1:15:17.63:130,0,18	0/0:11,0:10:20.78:0,21,653	0/0:8,0:7:15.56:0,16,132	0/0:8,0:5:6.12:0,6,44	0/1:14,5:13:99:218,0,165	0/1:7,0:6:29.19:29,0,35	1/1:20,0:14:14.71:236,15,0	0/1:9,0:8:76.41:96,0,76	./.	1/1:11,2:9:12.51:236,13,0	0/1:8,0:8:42.65:100,0,43	0/0:8,0:7:17.79:0,18,217	1/1:6,2:7:6.67:134,7,0	0/0:3,0:1:3.01:0,3,36
chr10	102530121	.	G	GAGGAGGA	3105.28	PASS	AB=0.959;AC=24;AF=0.429;AN=56;BaseQRankSum=5.449;DP=423;FS=43.911;HRun=0;HaplotypeScore=90.2438;InbreedingCoeff=0.2924;MQ=41.00;MQ0=61;MQRankSum=-4.756;QD=16.17;ReadPosRankSum=-0.681;VQSLOD=0.6261;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:25:69.24:0,69,1771	0/0:5,0:5:8.96:0,9,186	0/0:52,0:7:15.02:0,15,274	0/0:75,0:10:22.84:0,23,413	0/0:8,0:6:18.06:0,18,470	0/1:9,1:11:65.43:282,0,65	0/1:14,0:10:51.98:187,0,52	0/1:24,0:15:17.33:208,0,17	1/1:7,1:6:6.49:153,6,0	0/0:13,0:11:30.10:0,30,663	0/0:10,0:9:24.08:0,24,624	0/0:12,0:12:33.11:0,33,852	0/1:13,0:11:99:198,0,113	1/1:9,0:8:15.05:227,15,0	1/1:14,2:11:17.66:419,18,0	0/0:12,0:10:21.07:0,21,530	0/0:5,0:4:4.92:0,5,50	1/1:6,0:3:2.22:7,2,0	0/1:18,0:12:99:184,0,106	0/1:6,0:5:29.20:29,0,31	1/1:20,1:16:16.33:276,16,0	0/1:8,1:8:71.04:243,0,71	1/1:5,0:4:3.01:37,3,0	1/1:17,0:13:18.53:275,19,0	0/1:5,1:6:9.19:218,0,9	0/0:8,0:7:12.27:0,12,169	1/1:4,2:6:12.04:349,12,0	0/0:3,0:1:3.01:0,3,36
chr10	102530124	.	AGAGGAG	A	495.87	PASS	AB=0.934;AC=14;AF=0.250;AN=56;BaseQRankSum=2.774;DP=425;FS=5.953;HRun=0;HaplotypeScore=90.6923;InbreedingCoeff=-0.0305;MQ=41.71;MQ0=60;MQRankSum=-4.951;QD=3.79;ReadPosRankSum=0.446;VQSLOD=1.3501;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:26:66.23:0,66,2120	0/0:6,0:6:9.03:0,9,248	0/0:51,0:8:12.04:0,12,329	0/0:76,0:12:5.32:0,5,505	0/0:8,0:7:18.06:0,18,542	0/1:6,3:9:53.97:54,0,97	0/1:13,1:10:20.35:20,0,117	0/1:26,0:17:22.59:23,0,279	0/0:7,0:5:7.84:0,8,136	0/0:13,0:11:21.07:0,21,624	0/0:10,0:9:24.08:0,24,778	0/0:12,0:12:33.11:0,33,1080	0/1:12,0:10:88.65:89,0,156	0/1:12,0:10:0.10:0,0,93	0/0:17,0:11:24.03:0,24,343	0/0:13,0:11:23.86:0,24,761	1/1:5,1:5:8.53:114,9,0	1/1:7,0:4:8.90:145,9,0	0/1:15,1:11:51.68:52,0,152	0/1:5,1:5:30.67:31,0,42	0/0:18,2:15:15.37:0,15,234	0/1:8,0:8:37:46,0,37	0/0:3,0:3:3.01:0,3,47	0/0:16,0:13:13.07:0,13,156	0/1:5,1:6:20.77:21,0,141	0/1:9,0:7:56.08:56,0,172	0/0:6,0:5:8.01:0,8,156	0/0:3,0:1:3.01:0,3,40
chr10	102530234	.	A	AG	8558.04	PASS	AB=0.923;AC=31;AF=0.554;AN=56;BaseQRankSum=0.894;DP=477;FS=6.371;HRun=2;HaplotypeScore=75.3769;InbreedingCoeff=0.9074;MQ=56.35;MQ0=10;MQRankSum=-2.712;QD=29.21;ReadPosRankSum=3.345;VQSLOD=4.1692;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:75.02:0,75,903	0/0:6,0:6:15.05:0,15,184	0/0:33,0:14:37.94:0,38,397	0/0:21,0:13:24.32:0,24,286	0/0:8,0:7:21.07:0,21,257	1/1:0,22:21:51.17:725,51,0	1/1:6,23:29:72.17:1017,72,0	1/1:6,26:29:50.51:902,51,0	1/1:1,14:15:36.12:515,36,0	0/0:11,0:10:24.07:0,24,297	0/0:9,0:9:24.08:0,24,297	0/0:13,0:12:33.08:0,33,393	1/1:2,13:14:33.09:474,33,0	1/1:2,19:19:36.12:517,36,0	1/1:1,17:17:36.12:517,36,0	0/0:19,0:18:51.15:0,51,619	0/0:11,0:10:24.02:0,24,267	0/1:11,1:12:14.51:15,0,270	1/1:1,15:16:39.13:559,39,0	1/1:0,4:4:12.04:173,12,0	1/1:10,19:28:56.94:782,57,0	1/1:1,12:13:26.55:364,27,0	1/1:1,11:12:10.60:289,11,0	1/1:6,24:28:72.03:1002,72,0	1/1:4,8:12:17.24:317,17,0	0/0:16,0:16:12.51:0,13,486	1/1:0,11:12:27.05:389,27,0	0/0:10,0:10:13.17:0,13,235
chr10	102530401	.	AACTG	A	13587.30	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=11.986;DP=522;FS=1.906;HRun=0;HaplotypeScore=108.1455;InbreedingCoeff=0.9960;MQ=85.55;MQ0=0;MQRankSum=-11.484;QD=51.86;ReadPosRankSum=1.070;VQSLOD=5.5326;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.32:0,93,2657	0/0:7,0:7:21.06:0,21,548	0/0:24,0:23:69.23:0,69,1874	0/0:24,0:24:72.21:0,72,1860	0/0:18,0:18:51.18:0,51,1478	1/1:0,18:18:54.19:1118,54,0	1/1:0,19:18:51.18:1051,51,0	1/1:0,26:26:75.24:1521,75,0	1/1:0,15:14:36.12:747,36,0	0/0:22,0:22:66.22:0,66,1825	0/0:18,0:18:54.18:0,54,1466	0/0:20,0:20:60.21:0,60,1695	1/1:0,18:18:51.17:1015,51,0	1/1:0,21:21:54.19:1131,54,0	1/1:0,19:19:48.16:971,48,0	0/0:13,0:13:39.10:0,39,1063	0/0:23,0:23:66.20:0,66,1847	0/0:28,0:28:81.28:0,81,2287	1/1:0,21:21:63.19:1248,63,0	1/1:0,22:22:44.72:904,45,0	1/1:0,14:14:36.12:738,36,0	1/1:0,15:15:33.11:669,33,0	1/1:0,7:7:18.06:355,18,0	1/1:0,19:19:38.73:806,39,0	1/1:0,14:14:33.11:684,33,0	0/0:26,0:26:78.26:0,78,2164	1/1:0,14:14:30.10:629,30,0	0/0:6,0:6:15.05:0,15,354
chr10	102530556	.	C	CT	6492.08	PASS	AB=0.570;AC=27;AF=0.482;AN=56;BaseQRankSum=-10.584;DP=526;FS=9.581;HRun=10;HaplotypeScore=56.0228;InbreedingCoeff=0.7837;MQ=76.54;MQ0=0;MQRankSum=-0.004;QD=22.86;ReadPosRankSum=-0.161;VQSLOD=5.2707;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:27:42.71:0,43,551	0/0:10,0:10:20.97:0,21,172	0/0:15,0:12:17.03:0,17,148	0/0:17,0:17:16.99:0,17,111	0/0:20,2:22:53.90:0,54,443	1/1:3,15:18:45.11:480,45,0	1/1:2,9:11:18.05:192,18,0	1/1:9,27:36:40.89:823,41,0	1/1:0,20:20:54.14:576,54,0	0/0:25,0:25:67.73:0,68,544	0/0:24,0:24:62.90:0,63,517	0/0:16,0:16:38.94:0,39,320	1/1:3,17:21:50.96:525,51,0	1/1:1,12:13:33.08:352,33,0	1/1:4,17:21:23.48:455,23,0	0/0:8,0:8:14.97:0,15,123	0/0:25,0:26:64.94:0,65,523	0/0:17,0:18:29.96:0,30,246	1/1:11,16:27:48.07:485,48,0	1/1:2,17:19:48.12:512,48,0	1/1:1,4:5:12.03:128,12,0	1/1:0,16:16:45.11:480,45,0	1/1:2,17:20:53.97:556,54,0	0/1:4,11:15:19.17:226,0,19	0/1:6,15:23:20.13:391,0,20	0/0:19,1:20:15.91:0,16,331	0/1:4,15:19:6.98:312,0,7	0/0:14,0:14:14.89:0,15,119
chr10	102531976	.	C	CA	1325.37	PASS	AB=0.962;AC=45;AF=0.804;AN=56;BaseQRankSum=4.268;DP=488;FS=5.848;HRun=16;HaplotypeScore=138.0332;InbreedingCoeff=0.3428;MQ=64.59;MQ0=9;MQRankSum=-4.583;QD=3.53;ReadPosRankSum=-3.013;VQSLOD=0.0605;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,6:24:2.11:177,2,0	0/0:3,0:3:2.84:0,3,17	0/0:55,0:18:9.17:0,9,44	0/0:46,1:13:7.72:0,8,39	0/1:18,0:18:2.44:2,0,41	1/1:23,0:22:20.19:61,20,0	1/1:11,0:11:15.78:67,16,0	1/1:24,1:25:25.33:121,25,0	1/1:9,0:9:9.78:42,10,0	0/1:14,3:20:56.03:60,0,56	0/1:11,0:12:6.22:6,0,24	0/1:15,1:15:4.50:5,0,24	1/1:16,0:14:16.70:73,17,0	1/1:15,0:15:20.96:105,21,0	1/1:11,0:10:8.74:32,9,0	0/1:16,0:16:8.69:16,0,9	1/1:15,0:11:6.77:22,7,0	1/1:16,0:15:11.53:62,12,0	1/1:17,0:16:25.70:129,26,0	1/1:17,0:16:25.68:133,26,0	1/1:8,0:8:10.32:53,10,0	1/1:12,0:12:4.43:20,4,0	1/1:7,0:7:8.34:34,8,0	1/1:10,0:10:5.27:21,5,0	1/1:20,0:18:20.06:75,20,0	1/1:11,0:10:9.26:39,9,0	1/1:10,1:10:6.59:72,7,0	1/1:14,0:14:11.99:48,12,0
chr10	102531992	.	ACACATC	A	3813.27	PASS	AB=0.936;AC=27;AF=0.482;AN=56;BaseQRankSum=0.953;DP=507;FS=1.961;HRun=0;HaplotypeScore=111.6097;InbreedingCoeff=-0.1867;MQ=51.72;MQ0=18;MQRankSum=-0.586;QD=12.63;ReadPosRankSum=1.068;VQSLOD=2.6308;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:23:15.41:15,0,775	0/0:4,0:4:12.01:0,12,202	0/0:68,0:13:7.97:0,8,215	0/0:61,0:13:0.88:0,1,204	0/0:18,0:18:33.78:0,34,716	1/1:19,1:19:23.25:494,23,0	0/1:11,2:13:36.29:276,0,36	0/1:24,0:25:99:250,0,180	0/1:6,4:10:22.76:145,0,23	0/0:25,0:24:34.54:0,35,1183	0/0:14,0:14:6.94:0,7,536	0/0:13,0:13:6.30:0,6,383	0/1:14,1:12:8.96:239,0,9	1/1:13,1:14:7.34:267,7,0	1/1:6,2:7:6.14:151,6,0	0/1:10,0:10:4.46:4,0,322	0/1:16,1:13:99:417,0,203	0/1:16,0:15:16.45:16,0,218	0/1:20,2:19:57.65:291,0,58	0/1:19,0:18:72.67:121,0,73	1/1:9,0:7:2.76:32,3,0	1/1:6,1:7:7.24:75,7,0	0/1:8,0:8:58.46:58,0,66	1/1:7,0:7:4.50:16,4,0	0/1:18,0:16:9.06:214,0,9	0/1:12,1:12:91.54:274,0,92	0/1:14,0:13:97:196,0,97	0/1:8,4:12:62.80:261,0,63
chr10	102531993	.	CA	C	1809.32	PASS	AB=0.861;AC=21;AF=0.375;AN=56;BaseQRankSum=-0.081;DP=501;FS=8.570;HRun=16;HaplotypeScore=89.0189;InbreedingCoeff=-0.1822;MQ=51.66;MQ0=18;MQRankSum=-2.144;QD=5.58;ReadPosRankSum=-3.557;VQSLOD=1.2036;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:30.33:0,30,435	0/0:4,0:4:12:0,12,124	0/1:68,0:12:7.01:7,0,157	0/0:60,0:13:12.63:0,13,167	0/0:16,0:16:1.17:0,1,273	0/1:12,8:19:22.78:234,0,23	0/1:10,2:12:4.43:149,0,4	1/1:14,9:24:15.89:360,16,0	0/1:7,3:10:0.38:79,0,0	0/0:23,1:24:31.59:0,32,631	0/1:9,5:14:4.75:5,0,255	0/0:14,0:13:5.24:0,5,101	0/1:14,1:12:45.58:68,0,46	0/1:13,1:14:2.88:3,0,58	0/1:7,1:7:19.25:31,0,19	0/0:9,0:9:8.41:0,8,151	0/1:17,0:13:28.94:29,0,86	0/0:16,0:15:12.95:0,13,141	1/1:13,9:19:33.34:347,33,0	0/1:14,4:17:35.23:157,0,35	0/1:8,1:7:11.17:68,0,11	0/1:4,2:7:5.75:27,0,6	0/1:7,1:8:3.09:104,0,3	0/0:4,2:7:2.42:0,2,13	0/1:9,8:16:25.07:189,0,25	0/1:13,0:12:9.91:10,0,137	0/1:11,3:13:47.54:93,0,48	0/1:13,0:12:7.86:8,0,62
chr10	102531994	.	A	AAAAC	1637.75	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=1.107;DP=503;FS=29.245;HRun=0;HaplotypeScore=112.9612;InbreedingCoeff=0.3078;MQ=48.94;MQ0=18;MQRankSum=-6.680;QD=7.38;ReadPosRankSum=1.828;VQSLOD=1.0613;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:44:0,44,647	0/0:5,0:5:12.04:0,12,192	0/0:66,0:10:21.29:0,21,246	0/0:59,0:13:25.12:0,25,237	0/0:15,0:17:37.57:0,38,524	0/1:20,0:19:41.72:115,0,42	0/1:13,0:13:3.94:81,0,4	1/1:22,0:24:9.83:224,10,0	0/1:10,0:10:37.84:44,0,38	0/0:26,0:24:61.25:0,61,980	0/0:14,0:15:27.31:0,27,415	0/0:14,0:14:28.70:0,29,282	0/1:16,0:13:65.31:70,0,65	0/1:12,0:14:32.24:32,0,113	0/1:7,0:7:13.49:31,0,13	0/0:8,0:9:17.78:0,18,253	0/0:18,0:14:14.49:0,14,262	0/1:16,0:15:0.47:0,0,179	1/1:20,1:19:19.48:269,19,0	1/1:12,2:15:1.76:300,2,0	1/1:5,1:7:1:141,1,0	0/1:7,0:7:2.56:3,0,8	1/1:8,0:8:13.94:103,14,0	1/1:7,0:7:0.47:2,0,0	1/1:15,0:16:5.06:175,5,0	0/0:13,0:12:18.50:0,19,302	1/1:12,2:13:0.06:216,0,0	0/0:13,0:12:7.55:0,8,109
chr10	102531995	.	CATCA	C	1304.91	PASS	AB=0.968;AC=21;AF=0.375;AN=56;BaseQRankSum=3.860;DP=503;FS=18.379;HRun=0;HaplotypeScore=105.6470;InbreedingCoeff=-0.3486;MQ=48.81;MQ0=19;MQRankSum=0.089;QD=4.03;ReadPosRankSum=-0.385;VQSLOD=0.5270;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:22:9.40:9,0,524	0/0:3,0:5:5.06:0,5,151	0/0:67,0:10:8.50:0,8,127	0/1:59,0:13:44.64:45,0,80	0/0:17,0:17:36.27:0,36,514	0/1:19,0:19:36.99:162,0,37	0/1:13,0:13:24.23:117,0,24	0/1:24,0:24:33.45:33,0,209	0/1:9,0:10:16.73:60,0,17	0/0:24,0:23:55.53:0,56,754	0/0:16,0:16:15.06:0,15,414	0/0:15,0:14:17.01:0,17,292	0/1:16,0:13:19.39:105,0,19	0/1:14,0:14:11.62:114,0,12	1/1:8,0:7:3:77,3,0	0/0:9,0:9:6.28:0,6,194	0/1:18,0:14:99:160,0,121	0/0:16,0:15:13.56:0,14,154	0/1:21,0:19:98.33:98,0,108	0/1:16,0:15:13.63:14,0,103	0/0:9,0:7:4.21:0,4,48	1/1:7,0:7:1:49,1,0	0/1:8,0:8:9.26:9,0,51	0/1:7,0:7:0.02:0,0,1	0/1:17,0:16:73.23:78,0,73	0/1:13,0:12:22.96:146,0,23	0/1:13,0:12:54.12:54,0,112	0/1:8,5:12:28.91:128,0,29
chr10	102531996	.	ATC	A	1672.50	PASS	AB=0.948;AC=28;AF=0.500;AN=56;BaseQRankSum=4.901;DP=501;FS=8.673;HRun=0;HaplotypeScore=92.9275;InbreedingCoeff=-0.3379;MQ=51.38;MQ0=19;MQRankSum=0.170;QD=3.92;ReadPosRankSum=2.076;VQSLOD=1.1988;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:22:16.85:17,0,383	0/1:5,0:5:26.65:27,0,92	0/1:68,0:12:7.80:8,0,100	0/1:62,0:14:31.83:32,0,101	0/0:17,0:17:12.50:0,13,315	0/1:19,1:19:65.18:221,0,65	0/1:13,0:13:30.54:125,0,31	0/1:24,0:24:16.55:17,0,219	0/1:10,0:10:8.80:67,0,9	0/0:22,1:22:6.89:0,7,528	0/0:16,0:16:4.70:0,5,301	0/1:13,2:14:16.62:17,0,123	1/1:14,2:13:5.96:161,6,0	1/1:14,0:14:24.64:219,25,0	1/1:7,1:7:6.55:76,7,0	0/0:8,0:9:4.79:0,5,146	0/1:16,1:14:69.14:211,0,69	0/1:5,10:14:1.59:2,0,85	0/1:22,0:19:55.12:55,0,110	0/1:14,0:14:5.94:6,0,81	0/0:8,0:6:6.25:0,6,47	1/1:7,0:7:9.71:59,10,0	0/1:8,0:8:35.01:63,0,35	1/1:7,0:7:2.22:7,2,0	0/1:18,0:16:54.90:155,0,55	0/1:11,0:12:34.43:142,0,34	0/1:13,0:12:35.38:35,0,81	0/1:13,0:12:10.66:113,0,11
chr10	102532814	.	CT	C	8925.29	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=20.897;DP=749;FS=8.848;HRun=1;HaplotypeScore=153.5869;InbreedingCoeff=1.0000;MQ=74.71;MQ0=0;MQRankSum=-4.667;QD=22.37;ReadPosRankSum=3.741;VQSLOD=4.2957;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,1619	0/0:15,0:15:45.15:0,45,719	0/0:36,0:36:99:0,105,1569	0/0:19,0:18:47.99:0,48,687	0/0:32,0:32:93.32:0,93,1484	1/1:16,10:26:67.95:557,68,0	1/1:12,5:17:45.32:376,45,0	1/1:16,9:25:58.41:596,58,0	1/1:19,9:28:73.65:627,74,0	0/0:28,0:28:81.23:0,81,1268	0/0:33,0:33:99:0,99,1555	0/0:19,0:19:54.17:0,54,833	1/1:19,6:25:71.54:601,72,0	1/1:21,8:29:82.27:698,82,0	1/1:24,9:33:86.71:747,87,0	0/0:29,0:29:87.27:0,87,1340	0/0:29,0:29:81.24:0,81,1237	0/0:20,0:20:60.20:0,60,959	1/1:10,6:16:44.31:415,44,0	1/1:24,16:40:84.50:728,85,0	1/1:13,4:17:38.71:386,39,0	1/1:27,6:33:87.90:794,88,0	1/1:15,9:24:58.43:462,58,0	1/1:24,6:30:69.93:634,70,0	1/1:18,4:22:60.58:536,61,0	0/0:29,0:29:87.28:0,87,1348	1/1:24,10:34:92.77:766,93,0	0/0:23,0:23:66.16:0,66,1015
chr10	102532818	.	T	TC	11323.42	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=20.464;DP=738;FS=3.492;HRun=0;HaplotypeScore=141.5480;InbreedingCoeff=1.0000;MQ=71.97;MQ0=0;MQRankSum=-6.470;QD=27.96;ReadPosRankSum=1.245;VQSLOD=4.7272;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1341	0/0:15,0:15:45.15:0,45,629	0/0:32,0:32:90.29:0,90,1232	0/0:18,0:17:42.57:0,43,541	0/0:32,0:32:93.29:0,93,1269	1/1:17,9:26:74.12:725,74,0	1/1:13,5:18:50.35:490,50,0	1/1:18,9:27:66.77:722,67,0	1/1:19,8:27:76.91:731,77,0	0/0:28,0:28:81.27:0,81,1132	0/0:33,0:33:99:0,99,1352	0/0:18,0:18:54.18:0,54,753	1/1:22,6:28:77.29:785,77,0	1/1:21,8:29:83.01:840,83,0	1/1:24,9:33:94.89:968,95,0	0/0:26,0:26:78.26:0,78,1091	0/0:28,0:28:81.27:0,81,1131	0/0:20,0:20:60.20:0,60,838	1/1:9,6:15:41.93:458,42,0	1/1:27,15:42:99:1116,117,0	1/1:11,4:15:35.69:404,36,0	1/1:26,6:32:95.44:983,95,0	1/1:17,8:25:73.47:690,73,0	1/1:27,6:33:63.41:805,63,0	1/1:17,4:21:62.52:662,63,0	0/0:29,0:29:84.27:0,84,1160	1/1:24,10:34:98.24:944,98,0	0/0:19,0:19:54.18:0,54,755
chr10	102533501	.	ATTTTTAC	A	13417.46	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=17.658;DP=607;FS=8.163;HRun=0;HaplotypeScore=218.1693;InbreedingCoeff=0.9674;MQ=89.97;MQ0=0;MQRankSum=-17.482;QD=43.14;ReadPosRankSum=3.321;VQSLOD=3.7645;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.23:0,72,2650	0/0:13,0:13:36.12:0,36,1391	0/0:26,0:26:67.17:0,67,2157	0/0:33,0:33:77.64:0,78,2530	0/0:33,0:33:96.32:0,96,3660	1/1:2,22:24:45.15:1137,45,0	1/1:3,12:15:24.08:580,24,0	1/1:7,18:25:47.95:930,48,0	1/1:0,18:18:36.12:884,36,0	0/0:28,0:28:81.26:0,81,3017	0/0:17,0:17:48.16:0,48,1806	0/0:22,0:22:63.22:0,63,2485	1/1:3,17:20:42.14:1040,42,0	1/1:2,13:15:24.08:601,24,0	1/1:1,17:18:30.10:757,30,0	0/0:14,0:14:42.14:0,42,1585	0/0:20,0:20:57.20:0,57,2205	0/0:19,0:19:57.20:0,57,2163	1/1:2,11:13:30.01:629,30,0	1/1:3,33:36:63.20:1498,63,0	1/1:2,6:8:9.03:200,9,0	1/1:5,18:23:42.14:1061,42,0	1/1:2,31:33:42.09:986,42,0	1/1:1,5:6:3.01:76,3,0	1/1:1,23:24:54.18:1365,54,0	0/0:31,0:31:84.24:0,84,2774	1/1:3,30:33:69.23:1671,69,0	0/0:16,0:16:48.16:0,48,1885
chr10	102534975	.	G	GA	969.33	PASS	AB=0.914;AC=7;AF=0.125;AN=56;BaseQRankSum=4.610;DP=677;FS=4.049;HRun=10;HaplotypeScore=120.2977;InbreedingCoeff=0.4665;MQ=72.05;MQ0=0;MQRankSum=-1.854;QD=8.65;ReadPosRankSum=2.054;VQSLOD=2.3265;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:95.82:0,96,784	0/0:12,0:12:26.90:0,27,217	0/0:24,0:24:40.07:0,40,327	0/0:16,0:14:29.92:0,30,241	0/0:26,0:27:64.96:0,65,523	0/0:21,0:21:33.40:0,33,159	0/1:12,1:13:26.57:27,0,77	0/0:27,0:27:27.80:0,28,86	0/0:24,1:25:4.73:0,5,196	0/0:28,0:28:65.90:0,66,538	0/0:19,1:21:26.99:0,27,417	0/0:25,1:26:39.93:0,40,534	0/0:25,0:25:2.16:0,2,165	0/0:21,1:22:18.27:0,18,185	0/0:27,1:28:26.29:0,26,220	0/0:27,0:27:68.89:0,69,564	1/1:4,16:22:36.68:436,37,0	1/1:3,23:29:62.64:604,63,0	0/0:25,0:25:29.55:0,30,79	0/0:24,0:24:26.65:0,27,80	0/0:13,0:13:11.21:0,11,27	0/1:24,1:25:3.59:4,0,168	0/0:28,0:28:59.10:0,59,291	0/1:19,4:23:36.61:37,0,165	0/0:27,1:27:25.69:0,26,208	0/0:31,0:31:40.84:0,41,125	0/0:33,0:33:35.99:0,36,95	0/0:13,0:13:16.83:0,17,54
chr10	102534985	.	AC	A	6462.73	PASS	AB=0.989;AC=27;AF=0.482;AN=56;BaseQRankSum=2.488;DP=687;FS=0.000;HRun=2;HaplotypeScore=98.4894;InbreedingCoeff=0.3253;MQ=78.48;MQ0=0;MQRankSum=-0.995;QD=14.86;ReadPosRankSum=-2.299;VQSLOD=3.7118;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1506	0/0:13,0:13:39.11:0,39,513	0/0:29,0:29:58.72:0,59,799	0/0:20,0:18:38.07:0,38,451	0/0:27,0:27:77:0,77,976	0/1:21,0:21:33.33:129,0,33	0/1:13,1:14:17.94:96,0,18	1/1:14,18:32:87.74:1017,88,0	0/1:27,0:27:62.91:63,0,64	0/0:24,0:24:72.22:0,72,942	0/0:23,0:23:64.98:0,65,829	0/0:24,0:24:72.22:0,72,962	0/0:22,1:23:0.50:0,1,73	0/1:20,0:20:21.11:21,0,60	0/1:27,1:28:52.60:53,0,68	0/0:26,0:26:78.22:0,78,1016	1/1:23,0:23:45.46:234,45,0	1/1:26,0:26:59.15:265,59,0	1/1:2,20:22:63.09:774,63,0	1/1:2,25:27:71.95:830,72,0	1/1:0,12:12:27.09:349,27,0	0/1:24,0:24:20.65:21,0,63	0/1:28,0:28:39.71:40,0,92	0/1:28,0:28:42:130,0,42	0/1:25,0:25:41.09:41,0,56	1/1:2,28:30:77.78:996,78,0	1/1:1,33:34:74.28:998,74,0	1/1:5,9:14:27.24:405,27,0
chr10	102535433	.	TAC	T	16234.06	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=14.528;DP=859;FS=0.302;HRun=0;HaplotypeScore=122.5367;InbreedingCoeff=0.9494;MQ=61.58;MQ0=3;MQRankSum=-0.901;QD=27.80;ReadPosRankSum=2.135;VQSLOD=6.0755;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,135,2148	0/0:13,1:14:2.22:0,2,531	0/0:24,0:19:45.66:0,46,701	0/0:20,0:14:5.67:0,6,400	0/0:21,0:21:45.15:0,45,726	1/1:4,14:18:42.13:517,42,0	1/1:9,25:34:69.22:849,69,0	1/1:15,36:51:99:1289,104,0	1/1:4,26:30:75.24:923,75,0	0/0:48,0:48:99:0,120,1882	0/0:16,0:16:39.13:0,39,631	0/0:35,0:35:93.26:0,93,1469	1/1:5,22:27:66.21:811,66,0	1/1:4,20:24:57.18:702,57,0	1/1:4,28:32:84.26:1034,84,0	0/0:37,1:37:56.35:0,56,1373	1/1:4,40:45:99:1405,117,0	1/1:8,15:23:28.12:515,28,0	1/1:8,15:23:45.14:554,45,0	1/1:5,30:35:87.19:1037,87,0	1/1:7,45:52:99:1477,120,0	1/1:7,23:30:66.21:812,66,0	1/1:4,17:21:45.14:554,45,0	1/1:8,34:41:96.13:1158,96,0	1/1:2,20:22:57.18:701,57,0	1/1:7,23:30:26.26:825,26,0	1/1:10,24:34:69.22:849,69,0	1/1:4,6:10:18.06:221,18,0
chr10	102535512	.	A	AG	2867.61	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=-6.194;DP=718;FS=17.433;HRun=7;HaplotypeScore=123.6060;InbreedingCoeff=0.8010;MQ=77.19;MQ0=0;MQRankSum=-0.577;QD=20.34;ReadPosRankSum=0.280;VQSLOD=2.1864;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:91.72:0,92,816	0/0:8,0:8:17.93:0,18,156	0/0:18,0:18:39.02:0,39,367	0/0:21,0:21:27.61:0,28,415	0/1:18,0:18:0.10:0,0,179	0/0:19,0:19:18.15:0,18,319	0/0:20,0:20:53.49:0,53,475	0/0:31,0:31:52.34:0,52,458	0/0:22,0:22:48.06:0,48,462	0/0:18,0:18:20.48:0,20,184	0/1:10,0:10:2.70:3,0,155	0/0:38,0:38:83.26:0,83,774	0/0:20,0:20:23.13:0,23,353	0/0:17,0:17:34.57:0,35,314	0/0:40,0:40:92.96:0,93,874	0/0:39,0:38:95.97:0,96,911	1/1:10,43:53:99:1442,123,0	1/1:4,25:29:69.21:833,69,0	0/0:24,0:24:33.02:0,33,480	0/0:26,0:26:5.81:0,6,336	0/0:48,0:48:82.08:0,82,744	0/0:23,0:23:29.50:0,30,302	0/0:19,0:19:7.70:0,8,210	0/0:30,0:30:69.10:0,69,664	0/0:19,0:19:34.26:0,34,287	1/1:13,9:22:28.51:554,29,0	0/0:26,0:25:66.03:0,66,619	1/1:6,3:9:18.03:194,18,0
chr10	102536733	.	AT	A	894.39	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.043;DP=600;FS=2.980;HRun=9;HaplotypeScore=71.7050;InbreedingCoeff=0.8974;MQ=73.50;MQ0=0;MQRankSum=-1.120;QD=22.36;ReadPosRankSum=1.558;VQSLOD=4.6839;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:90.26:0,90,1029	0/0:7,0:7:18.05:0,18,208	0/0:17,0:17:39.77:0,40,433	0/0:8,0:8:1.75:0,2,63	0/0:27,0:27:69.17:0,69,771	0/0:25,0:25:72.16:0,72,790	0/0:24,0:24:60.16:0,60,675	0/0:23,0:23:47.97:0,48,533	0/0:20,0:20:57.17:0,57,653	0/0:34,0:36:89.92:0,90,986	0/0:17,0:17:48.13:0,48,545	0/0:18,0:18:42.11:0,42,474	0/0:23,0:23:63.19:0,63,724	0/0:19,0:19:54.13:0,54,603	0/0:23,0:23:63.15:0,63,700	0/0:21,1:22:32.71:0,33,630	0/0:25,0:25:66.16:0,66,740	0/0:19,0:19:51.15:0,51,588	0/0:23,0:23:60.17:0,60,678	0/0:17,0:17:51.13:0,51,569	0/0:17,0:17:39.12:0,39,450	0/0:21,0:22:65.96:0,66,714	0/0:20,0:20:51.13:0,51,570	0/0:25,0:25:60.18:0,60,692	0/0:23,0:23:60.17:0,60,683	1/1:1,25:26:75.04:686,75,0	0/0:24,0:24:69.20:0,69,796	1/1:0,14:14:36.02:329,36,0
chr10	102537707	.	GAGGGT	G	11773.28	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=14.547;DP=597;FS=0.679;HRun=0;HaplotypeScore=114.7342;InbreedingCoeff=0.9986;MQ=94.30;MQ0=0;MQRankSum=-7.446;QD=50.31;ReadPosRankSum=5.733;VQSLOD=4.7425;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,169,5093	0/0:7,0:7:21.07:0,21,665	0/0:35,0:35:99:0,99,3008	0/0:22,0:22:66.23:0,66,1963	0/0:13,0:13:36.12:0,36,1136	1/1:1,12:13:36.12:771,36,0	1/1:0,17:17:45.15:928,45,0	0/0:30,0:30:75.26:0,75,2214	1/1:0,20:20:42.14:912,42,0	0/0:13,0:13:39.12:0,39,1099	0/0:12,0:12:36.12:0,36,1138	0/0:21,0:21:60.21:0,60,1884	1/1:3,19:22:48.16:1042,48,0	1/1:1,16:17:42.14:912,42,0	1/1:1,24:25:63.22:1368,63,0	0/0:19,0:19:51.16:0,51,1541	1/1:0,31:31:72.25:1507,72,0	1/1:1,17:18:36.12:753,36,0	0/0:27,0:27:78.27:0,78,2412	0/0:26,0:26:78.27:0,78,2474	0/0:43,0:43:99:0,123,3810	1/1:1,13:14:33.11:716,33,0	1/1:0,11:11:27.09:586,27,0	1/1:2,25:27:63.22:1368,63,0	1/1:0,19:19:42.14:911,42,0	0/0:14,0:14:42.14:0,42,1332	0/0:17,0:17:51.18:0,51,1601	0/0:7,0:7:21.07:0,21,666
chr10	102537910	.	CATATATATATATATATATATAT	C	12387.47	PASS	AC=34;AF=0.680;AN=50;BaseQRankSum=3.719;DP=322;FS=24.380;HRun=0;HaplotypeScore=150.1905;InbreedingCoeff=0.6307;MQ=66.88;MQ0=1;MQRankSum=-4.704;QD=48.58;ReadPosRankSum=3.180;VQSLOD=2.5076;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:12.04:0,12,385	./.	./.	0/0:15,0:3:3.01:0,3,88	0/0:3,0:3:6.02:0,6,126	1/1:6,15:21:30.10:1760,30,0	1/1:6,3:9:3.01:173,3,0	1/1:22,0:22:24.07:663,24,0	1/1:3,7:10:5.91:352,6,0	0/0:5,0:5:3:0,3,28	0/0:2,0:2:3:0,3,25	0/0:3,0:3:5.99:0,6,50	1/1:4,11:15:11.73:705,12,0	1/1:3,8:11:15.05:768,15,0	1/1:5,14:19:18.06:1058,18,0	0/0:3,0:3:3.01:0,3,117	1/1:3,16:19:12.04:602,12,0	1/1:5,7:11:9.03:529,9,0	1/1:5,11:16:30.10:1178,30,0	1/1:7,9:16:18.06:877,18,0	1/1:5,4:9:6.02:342,6,0	1/1:2,3:5:6.49:353,6,0	1/1:6,9:15:8.63:399,9,0	1/1:8,5:13:3.01:176,3,0	1/1:8,16:24:30.10:1752,30,0	./.	1/1:10,9:19:11.94:701,12,0	0/0:2,0:2:0:0,0,0
chr10	102537926	.	T	TG	856.49	PASS	AB=1.000;AC=12;AF=0.240;AN=50;BaseQRankSum=-4.782;DP=215;FS=0.845;HRun=0;HaplotypeScore=82.0577;InbreedingCoeff=0.0391;MQ=50.04;MQ0=6;MQRankSum=1.328;QD=8.40;ReadPosRankSum=-0.101;VQSLOD=3.5469;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:12.04:0,12,156	./.	./.	0/0:31,0:4:4.10:0,4,44	0/0:2,0:2:6.02:0,6,82	0/1:16,0:15:13.79:83,0,14	1/1:3,0:3:3.01:42,3,0	1/1:4,5:8:24.07:327,24,0	0/0:8,0:8:4.29:0,4,13	0/0:1,0:1:3:0,3,28	0/0:1,0:1:3:0,3,25	0/0:2,0:2:5.99:0,6,50	0/0:11,0:11:8.88:0,9,26	0/1:8,0:8:9.96:32,0,10	0/0:14,0:14:13.32:0,13,39	0/0:1,0:1:3.01:0,3,41	0/1:16,0:16:7.79:8,0,10	0/0:7,0:7:6.66:0,7,20	0/1:11,0:11:2.10:204,0,2	0/1:9,0:9:9.60:101,0,10	0/1:4,0:4:4.85:37,0,5	0/0:3,0:3:4.37:0,4,13	0/0:9,0:9:4.25:0,4,13	0/0:5,0:5:2.22:0,2,7	0/1:16,0:16:13.72:126,0,14	./.	0/1:10,0:10:9.97:33,0,10	0/0:4,0:4:3.01:0,3,43
chr10	102537932	.	T	TC	1781.67	PASS	AB=1.000;AC=22;AF=0.478;AN=46;BaseQRankSum=-6.364;DP=259;FS=0.000;HRun=0;HaplotypeScore=121.4287;InbreedingCoeff=0.0539;MQ=49.68;MQ0=6;MQRankSum=-1.151;QD=9.18;ReadPosRankSum=-5.407;VQSLOD=2.1862;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:9.03:0,9,124	./.	./.	0/0:31,0:5:7.10:0,7,67	./.	0/1:20,0:19:24.53:119,0,25	1/1:4,0:4:5.38:55,5,0	1/1:18,4:21:54.20:696,54,0	1/1:11,0:11:0.78:130,1,0	./.	./.	0/0:1,0:1:3:0,3,25	0/0:13,0:13:8.15:0,8,25	0/1:8,0:8:6.74:43,0,7	0/1:16,0:16:21.81:32,0,22	0/0:1,0:1:3.01:0,3,41	0/1:19,0:19:6.52:47,0,7	0/1:11,0:11:10.41:81,0,10	1/1:18,0:18:0.75:183,1,0	1/1:12,0:12:5.92:183,6,0	1/1:6,0:6:10.60:74,11,0	0/0:3,0:3:4:0,4,12	0/1:11,0:11:3.77:83,0,4	1/1:8,0:8:1.86:62,2,0	0/1:18,0:18:14.93:90,0,15	0/0:2,0:2:3.01:0,3,41	0/1:10,0:10:6.86:46,0,7	0/0:4,0:4:3.01:0,3,42
chr10	102537977	.	ACATTCTACCATT	A	494.43	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.283;DP=449;FS=7.253;HRun=0;HaplotypeScore=188.0036;InbreedingCoeff=0.8416;MQ=86.96;MQ0=0;MQRankSum=-2.618;QD=82.40;ReadPosRankSum=0.401;VQSLOD=3.0126;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:42.14:0,42,2537	0/0:4,0:4:12.04:0,12,730	0/0:18,0:18:48.13:0,48,2555	0/0:16,0:16:45.15:0,45,2568	0/0:6,0:6:18.06:0,18,1069	0/0:25,0:25:57.20:0,57,3325	0/0:15,0:15:45.15:0,45,2591	0/0:35,0:35:90.31:0,90,4674	0/0:21,0:21:57.19:0,57,3465	0/0:13,0:13:36.12:0,36,2191	0/0:3,0:3:9.03:0,9,547	0/0:6,0:6:18.06:0,18,1078	0/0:17,0:17:42.14:0,42,2373	0/0:20,0:20:57.20:0,57,3208	0/0:31,0:31:87.30:0,87,5139	0/0:10,0:10:30.10:0,30,1825	0/0:23,0:23:54.19:0,54,3272	0/0:18,0:18:42.14:0,42,2535	0/0:16,0:16:48.13:0,48,2573	0/0:18,0:18:54.19:0,54,3005	0/0:15,0:15:33.11:0,33,1931	0/0:17,0:17:48.16:0,48,2698	0/0:17,0:17:36.12:0,36,2020	0/0:23,0:23:60.21:0,60,3441	0/0:24,0:24:54.19:0,54,3010	1/1:0,5:5:15.05:489,15,0	0/0:18,0:18:48.12:0,48,2756	1/1:0,1:1:3.01:110,3,0
chr10	102538752	.	GCCCATTCTA	G	1547.12	PASS	AB=0.529;AC=3;AF=0.054;AN=56;BaseQRankSum=6.934;DP=725;FS=3.573;HRun=0;HaplotypeScore=253.1283;InbreedingCoeff=0.6468;MQ=81.75;MQ0=0;MQRankSum=-7.113;QD=55.25;ReadPosRankSum=0.918;VQSLOD=3.2417;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,6439	0/0:13,0:13:39.13:0,39,1966	0/0:23,0:24:58.27:0,58,2441	0/0:17,0:17:51.17:0,51,1950	0/0:24,0:24:72.23:0,72,3446	0/0:23,0:23:69.22:0,69,3359	0/0:31,0:31:93.32:0,93,4692	0/0:28,0:28:84.28:0,84,3772	0/0:30,0:30:90.30:0,90,4336	0/0:21,0:21:63.22:0,63,3050	0/0:24,0:24:72.25:0,72,3572	0/0:27,0:27:78.27:0,78,3850	0/0:27,0:27:81.26:0,81,3867	0/0:28,0:28:84.26:0,84,3985	0/0:33,0:33:99:0,99,4993	0/0:29,0:29:87.30:0,87,4305	0/0:39,0:39:99:0,117,5846	0/0:22,0:22:66.23:0,66,3298	0/0:25,0:25:75.26:0,75,3587	0/0:18,0:18:54.19:0,54,2587	0/0:43,0:43:99:0,129,6466	0/0:14,0:14:42.14:0,42,2052	0/0:27,0:27:81.28:0,81,4080	0/0:35,0:35:99:0,105,5097	0/0:26,0:26:78.27:0,78,3872	0/1:2,16:18:88.09:1175,0,88	0/0:23,0:23:69.24:0,69,3232	1/1:6,4:10:27.04:478,27,0
chr10	102538762	.	GA	G	233.57	PASS	AB=0.613;AC=2;AF=0.036;AN=56;BaseQRankSum=2.616;DP=740;FS=2.141;HRun=1;HaplotypeScore=142.7694;InbreedingCoeff=-0.0513;MQ=82.18;MQ0=0;MQRankSum=-4.343;QD=7.79;ReadPosRankSum=-2.201;VQSLOD=0.1623;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,2037	0/0:15,0:15:42.14:0,42,668	0/0:26,0:26:69.83:0,70,1039	0/0:17,0:17:51.06:0,51,753	0/0:24,0:24:72.19:0,72,1056	0/0:23,0:23:67.03:0,67,396	0/0:34,0:34:95.35:0,95,545	0/0:24,0:24:11.92:0,12,260	0/0:29,0:29:84.48:0,84,484	0/0:22,0:22:63.21:0,63,988	0/0:23,0:23:69.24:0,69,1103	0/0:26,0:26:75.24:0,75,1176	0/0:28,0:28:61.86:0,62,442	0/0:28,0:28:81.62:0,82,485	0/0:35,0:35:71.97:0,72,512	0/0:30,0:30:90.31:0,90,1435	0/0:38,0:38:99:0,111,628	0/0:25,0:25:69.98:0,70,408	0/0:26,0:26:50.76:0,51,386	0/0:19,0:19:30.41:0,30,292	0/0:47,0:47:99:0,111,817	0/0:19,0:19:29.61:0,30,246	0/0:29,0:29:81.78:0,82,483	0/0:34,0:34:1.93:0,2,416	0/0:26,0:26:22.88:0,23,360	0/1:7,16:23:76.82:257,0,77	0/0:19,0:19:4.08:0,4,246	0/1:3,4:7:36.97:65,0,37
chr10	102539116	.	A	AAC	23258.14	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=0.073;DP=863;FS=3.006;HRun=0;HaplotypeScore=149.9968;InbreedingCoeff=0.9003;MQ=55.98;MQ0=4;MQRankSum=-1.135;QD=36.98;ReadPosRankSum=-1.418;VQSLOD=5.8656;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.22:0,81,1000	0/0:20,0:20:54.16:0,54,674	0/0:27,0:17:6.54:0,7,277	0/1:25,0:14:19.18:19,0,38	0/0:24,0:24:72.20:0,72,889	1/1:3,23:26:60.67:977,61,0	1/1:4,34:39:78.26:1277,78,0	1/1:7,35:42:99:1629,99,0	1/1:7,15:22:51.17:811,51,0	0/0:31,0:31:78.22:0,78,956	0/0:23,0:23:57.17:0,57,710	0/0:37,0:37:96.27:0,96,1195	1/1:4,27:32:75.25:1211,75,0	1/1:5,26:31:78.09:1223,78,0	1/1:6,48:54:99:2048,129,0	0/0:42,1:43:79.31:0,79,1541	1/1:2,11:13:33.06:507,33,0	1/1:1,17:17:48.16:803,48,0	1/1:5,18:23:54.11:799,54,0	1/1:4,32:36:96.33:1590,96,0	1/1:11,62:72:99:2800,174,0	1/1:7,28:35:84.28:1353,84,0	1/1:5,23:28:63.21:1054,63,0	1/1:2,33:36:87.12:1395,87,0	1/1:4,27:31:72.25:1191,72,0	1/1:2,25:28:75.26:1254,75,0	1/1:8,20:28:57.13:918,57,0	1/1:1,8:9:24.08:401,24,0
chr10	102539186	.	CATACAT	C	4738.80	PASS	AB=0.727;AC=27;AF=0.482;AN=56;BaseQRankSum=11.442;DP=690;FS=1.666;HRun=0;HaplotypeScore=251.7203;InbreedingCoeff=0.5311;MQ=45.95;MQ0=10;MQRankSum=-0.222;QD=11.91;ReadPosRankSum=-4.379;VQSLOD=3.4714;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.24:0,69,1917	0/0:13,0:13:36.09:0,36,1037	0/0:38,0:20:60.20:0,60,1343	0/0:32,0:20:58.81:0,59,1173	0/0:22,0:22:57.15:0,57,1622	1/1:15,8:24:25.20:341,25,0	1/1:21,10:31:8.21:282,8,0	0/1:14,18:29:30.63:504,0,31	1/1:20,8:28:6.08:269,6,0	0/0:40,0:40:99:0,111,3252	0/0:25,0:25:69.24:0,69,2045	0/0:30,0:30:86.73:0,87,2612	1/1:15,10:25:21.47:478,21,0	1/1:11,8:19:7.28:116,7,0	1/1:26,11:41:38.91:455,39,0	0/0:26,0:26:78.27:0,78,2534	0/1:7,5:13:50.51:154,0,51	0/1:7,3:9:57.25:162,0,57	0/1:11,5:15:4.80:338,0,5	0/1:16,6:22:10.44:210,0,10	1/1:18,3:20:14.55:171,15,0	0/1:23,10:33:0.76:138,0,1	1/1:12,1:13:20.93:208,21,0	1/1:13,4:19:14.25:154,14,0	1/1:15,10:28:28.30:351,28,0	0/0:35,0:35:72.95:0,73,1298	0/1:11,9:21:4.98:409,0,5	0/0:6,0:6:18.06:0,18,333
chr10	102539190	.	CAT	C	1396.26	PASS	AB=0.975;AC=24;AF=0.429;AN=56;BaseQRankSum=10.054;DP=682;FS=3.874;HRun=0;HaplotypeScore=224.2997;InbreedingCoeff=-0.0039;MQ=44.57;MQ0=11;MQRankSum=0.257;QD=3.22;ReadPosRankSum=-4.865;VQSLOD=1.8314;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.18:0,72,1137	0/0:11,0:11:30.09:0,30,528	0/0:39,0:19:57.17:0,57,825	0/0:31,0:18:52.29:0,52,632	0/0:20,0:20:54.17:0,54,924	1/1:19,1:20:23.12:168,23,0	0/1:32,0:32:35.09:59,0,35	0/1:34,0:31:99:167,0,164	0/1:25,0:25:12.75:59,0,13	0/0:39,0:39:99:0,111,1814	0/0:25,0:25:69.18:0,69,1136	0/0:29,0:29:70.87:0,71,1397	0/1:25,1:25:45.85:77,0,46	1/1:19,0:19:6.89:53,7,0	1/1:37,4:41:13.55:214,14,0	0/0:29,0:29:83.86:0,84,1394	0/1:14,1:15:21.05:21,0,93	0/1:12,0:11:23.19:23,0,82	0/1:14,0:13:34.67:59,0,35	0/1:24,0:24:28.22:116,0,28	1/1:20,1:19:11.98:98,12,0	0/1:34,0:34:9.77:56,0,10	1/1:13,0:13:9.91:72,10,0	0/1:18,2:20:9.26:64,0,9	0/1:22,3:25:6.04:105,0,6	0/1:34,0:34:99:103,0,222	0/1:17,1:18:36.50:57,0,37	0/1:6,0:6:7.62:8,0,40
chr10	102539204	.	A	ACAC	470.53	PASS	AB=0.917;AC=7;AF=0.125;AN=56;BaseQRankSum=3.471;DP=606;FS=5.732;HRun=0;HaplotypeScore=193.7111;InbreedingCoeff=0.2401;MQ=42.21;MQ0=12;MQRankSum=-6.195;QD=5.35;ReadPosRankSum=1.506;VQSLOD=2.5574;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:62.59:0,63,1048	0/0:7,0:7:21.07:0,21,325	0/0:38,0:19:51.64:0,52,892	0/0:26,0:12:34.66:0,35,516	0/0:22,0:22:60.12:0,60,973	0/1:13,0:13:9.96:10,0,53	0/0:26,0:26:14.70:0,15,151	0/0:36,0:32:11.52:0,12,311	0/0:22,0:22:10.41:0,10,94	0/0:39,0:38:99:0,111,1897	0/0:22,0:22:60.16:0,60,1031	0/0:32,0:32:90.30:0,90,1579	0/0:21,0:21:36.52:0,37,332	0/0:18,0:18:5.98:0,6,56	0/1:27,0:27:3.21:3,0,45	0/0:27,0:26:75.22:0,75,1200	0/0:14,0:14:23.33:0,23,213	0/0:10,0:9:21.04:0,21,206	0/0:15,0:14:14.44:0,14,214	0/0:16,0:15:9.01:0,9,85	0/0:17,0:15:1.25:0,1,3	0/0:26,0:26:3.47:0,3,27	1/1:9,0:9:0.68:2,1,0	0/0:21,0:21:3.47:0,3,27	0/0:21,0:20:7.59:0,8,47	0/1:22,11:32:99:387,0,192	0/0:19,0:19:35.76:0,36,313	1/1:1,5:6:2.76:170,3,0
chr10	102539215	.	GAGAGAGAGAGAGAGAGAGAGAGAA	G	2063.76	PASS	AB=1.000;AC=33;AF=0.660;AN=50;BaseQRankSum=6.317;DP=556;FS=0.631;HRun=0;HaplotypeScore=303.3618;InbreedingCoeff=0.1910;MQ=40.64;MQ0=14;MQRankSum=-5.345;QD=5.37;ReadPosRankSum=-0.093;VQSLOD=2.1278;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:23:31.41:31,0,1503	0/1:4,0:4:13.16:13,0,275	1/1:29,0:13:1.77:3,2,0	0/1:20,0:8:0.84:1,0,20	0/0:20,0:20:7.54:0,8,1232	1/1:13,0:13:1.53:8,2,0	1/1:27,0:27:0.17:20,0,0	0/1:28,0:25:49.05:103,0,49	1/1:18,2:20:8.92:206,9,0	0/0:37,0:36:74.90:0,75,4869	0/0:20,0:20:22.27:0,22,1276	0/0:28,0:28:48.20:0,48,2612	0/1:22,0:22:26.10:305,0,26	1/1:18,0:18:1.99:129,2,0	1/1:25,2:27:3.48:189,3,0	0/0:23,0:22:18.42:0,18,2367	1/1:12,1:13:13.97:420,14,0	1/1:9,1:9:14.89:270,15,0	0/1:15,0:14:35.64:72,0,36	1/1:16,0:15:2.21:23,2,0	./.	1/1:26,0:26:3:25,3,0	./.	1/1:22,0:22:3:25,3,0	./.	1/1:25,0:24:34.71:213,35,0	0/1:20,0:20:67.25:109,0,67	1/1:5,0:5:8.87:57,9,0
chr10	102539217	.	GAGAGAGAGAGAGAGAGAGAGAA	G	2421.57	PASS	AB=1.000;AC=36;AF=0.720;AN=50;BaseQRankSum=6.692;DP=550;FS=3.806;HRun=0;HaplotypeScore=286.1179;InbreedingCoeff=0.3604;MQ=40.69;MQ0=15;MQRankSum=-5.318;QD=6.41;ReadPosRankSum=0.389;VQSLOD=1.9876;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:23:31.41:31,0,1323	0/1:5,0:5:21.92:22,0,419	1/1:24,0:11:2.13:5,2,0	0/1:20,0:8:0.84:1,0,20	0/0:19,0:19:7.54:0,8,1105	1/1:13,0:13:1.70:8,2,0	1/1:27,0:27:0.20:20,0,0	0/1:28,0:25:4.12:143,0,4	1/1:20,0:20:8.79:192,9,0	0/0:40,0:38:80.92:0,81,4801	0/0:19,0:19:0.84:0,1,1100	0/0:28,0:28:48.20:0,48,2308	1/1:19,2:21:23.37:458,23,0	1/1:16,2:18:1.99:173,2,0	1/1:25,1:26:6:191,6,0	0/0:24,0:23:21.02:0,21,2183	1/1:13,0:13:13.97:373,14,0	1/1:10,0:9:14.89:238,15,0	1/1:15,0:14:3.43:95,3,0	1/1:16,0:15:5.69:48,6,0	./.	1/1:26,0:26:3:25,3,0	./.	1/1:22,0:22:3:25,3,0	./.	1/1:25,0:24:35.24:221,35,0	1/1:19,0:19:7.89:247,8,0	1/1:5,0:5:8.87:57,9,0
chr10	102539239	.	AAG	A	249.36	PASS	AB=1.000;AC=24;AF=0.522;AN=46;BaseQRankSum=1.674;DP=485;FS=17.168;HRun=0;HaplotypeScore=147.9971;InbreedingCoeff=0.2667;MQ=41.05;MQ0=22;MQRankSum=-0.632;QD=0.97;ReadPosRankSum=0.573;VQSLOD=1.8785;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:26:20.63:156,21,0	1/1:8,0:7:2.84:33,3,0	./.	0/0:11,0:3:2.99:0,3,23	1/1:15,0:15:2.97:33,3,0	0/0:10,0:10:2.99:0,3,24	0/0:24,0:24:6.45:0,6,48	./.	0/1:20,0:20:5.18:5,0,19	0/0:40,0:38:17.80:0,18,382	./.	1/1:21,6:27:5.81:66,6,0	0/1:22,0:22:6.53:7,0,18	1/1:16,0:16:2.80:13,3,0	0/1:30,0:30:7.07:7,0,20	0/0:22,0:22:23.21:0,23,205	0/1:14,0:14:15.45:19,0,15	1/1:7,0:6:2.84:14,3,0	0/0:10,0:7:0.47:0,0,1	1/1:14,0:13:2.51:11,3,0	0/0:12,0:10:2.98:0,3,22	0/0:26,0:26:0.47:0,0,1	0/0:9,0:9:3.47:0,3,26	1/1:26,0:24:0.38:0,0,0	./.	1/1:15,0:13:1.24:3,1,0	1/1:15,0:15:2.84:14,3,0	./.
chr10	102539986	.	A	ATG	641.31	PASS	AB=0.854;AC=16;AF=0.381;AN=42;BaseQRankSum=-1.642;DP=214;FS=23.473;HRun=0;HaplotypeScore=59.3331;InbreedingCoeff=0.1160;MQ=58.23;MQ0=9;MQRankSum=2.514;QD=5.78;ReadPosRankSum=0.786;VQSLOD=1.2556;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:11.97:0,12,96	./.	0/0:20,0:3:2.98:0,3,21	0/0:34,0:12:3.47:0,3,15	./.	1/1:7,4:11:11.98:97,12,0	0/1:5,1:6:13.01:13,0,60	0/0:13,0:13:31.51:0,32,229	1/1:5,0:5:0.75:41,1,0	0/0:1,0:1:3:0,3,28	0/0:2,0:2:3:0,3,25	./.	0/1:2,2:4:15.95:53,0,16	1/1:4,1:5:2.73:23,3,0	0/1:5,0:5:18.06:18,0,19	./.	1/1:19,0:19:8.32:153,8,0	0/1:29,0:30:81.27:247,0,81	0/0:2,0:2:5.88:0,6,36	./.	./.	1/1:4,1:5:8.97:71,9,0	0/1:4,0:4:18.95:19,0,19	./.	0/1:7,10:17:42.09:45,0,42	0/0:4,0:3:5.16:0,5,42	0/0:3,0:3:8.20:0,8,54	0/0:13,0:13:20.51:0,21,154
chr10	102540526	.	GGGCTA	G	11208.48	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=11.949;DP=613;FS=0.683;HRun=0;HaplotypeScore=143.6334;InbreedingCoeff=0.9913;MQ=84.82;MQ0=0;MQRankSum=-17.967;QD=45.56;ReadPosRankSum=1.277;VQSLOD=5.0610;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,3945	0/0:9,0:9:27.09:0,27,792	0/0:26,0:26:69.20:0,69,1667	0/0:20,0:20:56.57:0,57,1431	0/0:18,0:18:51.18:0,51,1580	1/1:1,14:15:33.11:694,33,0	1/1:1,22:23:51.17:1063,51,0	0/0:32,0:32:90.29:0,90,2579	1/1:1,18:20:48.16:1021,48,0	0/0:24,0:24:72.25:0,72,2191	0/0:21,0:21:60.21:0,60,1853	0/0:22,0:22:63.22:0,63,1906	1/1:1,16:17:42.14:892,42,0	1/1:4,20:24:57.19:1183,57,0	1/1:1,28:29:75.26:1594,75,0	0/0:29,0:29:84.29:0,84,2560	1/1:4,28:32:51.17:1031,51,0	1/1:1,17:18:39.10:788,39,0	0/0:28,0:28:81.24:0,81,2412	0/0:11,0:11:30.10:0,30,939	0/0:30,0:30:87.28:0,87,2643	1/1:0,16:16:36.12:750,36,0	1/1:2,17:19:45.11:885,45,0	1/1:2,14:16:23.61:483,24,0	1/1:0,17:17:39.13:823,39,0	0/0:26,0:26:75.26:0,75,2292	0/0:24,0:24:69.24:0,69,2085	0/0:3,0:3:9.03:0,9,282
chr10	102540727	.	TACACAC	T	547.03	PASS	AC=12;AF=0.250;AN=48;BaseQRankSum=0.220;DP=582;FS=0.000;HRun=0;HaplotypeScore=136.4765;InbreedingCoeff=0.8202;MQ=63.30;MQ0=16;MQRankSum=-0.605;QD=4.64;ReadPosRankSum=1.989;VQSLOD=2.3150;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:39,1:39:15.46:160,15,0	0/0:7,0:8:5.13:0,5,132	./.	./.	0/0:8,0:8:6.02:0,6,83	0/0:24,0:22:30.10:0,30,623	0/0:25,0:25:23.36:0,23,420	./.	0/0:12,0:11:18.06:0,18,408	0/0:25,0:24:33.56:0,34,621	0/0:12,0:13:8.12:0,8,218	0/0:10,0:15:24.05:0,24,541	0/0:22,0:21:27.98:0,28,620	0/0:17,0:17:20.94:0,21,401	0/0:30,0:29:21.07:0,21,478	0/0:21,0:20:27.04:0,27,581	0/0:33,0:29:29.81:0,30,458	0/0:20,0:19:22.36:0,22,281	1/1:11,2:13:5.99:49,6,0	1/1:16,0:18:6.96:93,7,0	1/1:26,0:26:9.02:125,9,0	0/0:20,0:17:12.04:0,12,265	0/0:16,0:14:18:0,18,406	0/0:32,0:31:22.89:0,23,504	0/0:23,0:23:36.12:0,36,732	./.	1/1:9,6:15:12.04:235,12,0	1/1:5,0:6:3.01:42,3,0
chr10	102540767	.	CA	C	2556.76	PASS	AB=0.828;AC=16;AF=0.286;AN=56;BaseQRankSum=-2.710;DP=694;FS=13.837;HRun=1;HaplotypeScore=97.8123;InbreedingCoeff=0.4083;MQ=55.48;MQ0=67;MQRankSum=-0.217;QD=7.72;ReadPosRankSum=3.392;VQSLOD=-0.3573;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:96.65:0,97,1151	0/0:9,0:9:21.83:0,22,248	0/0:31,0:12:36.11:0,36,450	0/0:27,0:16:48.15:0,48,595	0/0:16,0:16:38.96:0,39,444	0/1:18,5:20:24.99:129,0,25	0/1:20,3:20:3.05:180,0,3	0/0:31,0:30:90.23:0,90,1100	1/1:16,1:15:2.98:40,3,0	0/0:23,0:21:62.76:0,63,768	0/0:16,0:15:36.88:0,37,445	0/0:24,0:24:57.17:0,57,717	0/1:30,0:27:17.15:88,0,17	1/1:24,2:24:18.33:226,18,0	1/1:29,2:28:12.04:159,12,0	0/0:28,0:27:66.19:0,66,869	0/1:12,24:23:1.20:561,0,1	0/1:20,16:24:89.82:560,0,90	0/0:9,0:9:18.02:0,18,187	0/0:23,0:23:32.95:0,33,389	0/0:49,0:47:94.45:0,94,1104	1/1:17,2:14:9.03:120,9,0	0/1:16,1:15:21.12:71,0,21	0/1:26,10:27:1.41:351,0,1	0/1:27,4:29:1.78:242,0,2	0/0:11,0:11:32.59:0,33,387	0/0:21,0:21:41.69:0,42,447	0/0:5,0:4:8.32:0,8,112
chr10	102540768	.	A	AC	4351.06	PASS	AB=0.822;AC=23;AF=0.411;AN=56;BaseQRankSum=-5.001;DP=685;FS=34.903;HRun=1;HaplotypeScore=92.2372;InbreedingCoeff=0.9155;MQ=56.34;MQ0=67;MQRankSum=0.858;QD=13.19;ReadPosRankSum=3.771;VQSLOD=2.1087;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:90.07:0,90,1073	0/0:9,0:9:23.90:0,24,256	0/0:31,0:12:36.12:0,36,456	0/0:27,0:16:45.14:0,45,563	0/0:16,0:16:39.09:0,39,456	1/1:7,16:20:31.52:339,32,0	1/1:7,17:21:22.70:246,23,0	0/0:31,0:30:87.27:0,87,1091	1/1:1,17:16:18.49:245,18,0	0/0:23,0:21:63.14:0,63,756	0/0:16,0:15:35.93:0,36,404	0/0:25,0:25:52.82:0,53,624	1/1:4,27:27:32.70:442,33,0	1/1:5,21:24:28.09:324,28,0	1/1:4,27:28:29.12:386,29,0	0/0:28,0:27:66.19:0,66,827	1/1:31,6:23:18.79:385,19,0	0/1:29,8:25:85.31:372,0,85	0/0:8,0:8:17.99:0,18,172	0/0:22,0:22:38.58:0,39,436	0/0:43,0:41:87.18:0,87,1064	1/1:6,12:12:17.65:226,18,0	1/1:4,13:15:20.55:262,21,0	1/1:14,21:25:54.11:696,54,0	1/1:8,23:28:39.81:427,40,0	0/0:11,0:11:32.47:0,32,389	0/0:21,0:21:48.32:0,48,488	0/0:5,0:4:11.77:0,12,127
chr10	102541661	.	G	GACAA	30361.41	PASS	AB=0.557;AC=37;AF=0.661;AN=56;BaseQRankSum=-11.428;DP=707;FS=1.741;HRun=0;HaplotypeScore=106.7169;InbreedingCoeff=0.9167;MQ=86.72;MQ0=4;MQRankSum=-9.788;QD=63.38;ReadPosRankSum=0.561;VQSLOD=6.9087;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:93.26:0,93,1604	0/0:7,0:7:18.05:0,18,301	0/0:28,0:28:78.06:0,78,1311	0/0:27,0:27:68.70:0,69,1139	0/0:32,0:32:90.31:0,90,1656	1/1:3,26:29:75.26:1937,75,0	1/1:4,29:36:90.31:2333,90,0	1/1:10,19:30:69.22:1674,69,0	1/1:8,17:23:54.19:1386,54,0	0/0:26,0:26:75.26:0,75,1380	0/0:17,0:17:51.16:0,51,909	0/0:27,0:27:72.25:0,72,1318	1/1:4,21:25:63.03:1655,63,0	1/1:2,23:25:72.25:1891,72,0	1/1:5,20:25:66.19:1683,66,0	0/0:29,0:29:87.28:0,87,1566	1/1:5,26:33:84.25:2140,84,0	1/1:3,12:14:36.08:891,36,0	1/1:9,14:23:57.20:1503,57,0	1/1:3,17:20:51.17:1298,51,0	1/1:2,18:22:45.15:1146,45,0	1/1:5,20:26:63.17:1603,63,0	1/1:2,21:24:63.09:1517,63,0	1/1:2,23:26:60.16:1523,60,0	1/1:5,14:19:45.08:1070,45,0	0/1:7,27:34:33.62:2243,0,34	1/1:2,32:34:96.30:2473,96,0	1/1:0,6:6:15.05:396,15,0
chr10	102542449	.	T	TG	8575.42	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=1.927;DP=552;FS=1.116;HRun=5;HaplotypeScore=81.1598;InbreedingCoeff=0.9896;MQ=96.69;MQ0=0;MQRankSum=-4.238;QD=31.41;ReadPosRankSum=4.581;VQSLOD=5.2831;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.18:0,72,772	0/0:7,0:7:21.05:0,21,226	0/0:37,0:37:88.62:0,89,875	0/0:17,0:17:36.07:0,36,373	0/0:19,0:19:51.05:0,51,516	1/1:1,16:17:42.14:551,42,0	1/1:1,28:29:78.25:1026,78,0	0/0:28,0:28:69.17:0,69,742	1/1:0,12:12:33.11:434,33,0	0/0:9,0:9:27.06:0,27,284	0/0:11,0:11:33.06:0,33,340	0/0:16,0:16:45.11:0,45,483	1/1:3,14:17:30.10:395,30,0	1/1:3,18:21:54.18:710,54,0	1/1:3,31:34:93.30:1221,93,0	0/0:20,0:20:14.67:0,15,509	1/1:4,26:30:72.23:946,72,0	1/1:4,35:39:87.28:1142,87,0	0/0:17,0:17:42.09:0,42,444	0/0:17,0:17:42.08:0,42,436	0/0:16,0:16:45.09:0,45,475	1/1:3,16:19:39.13:513,39,0	1/1:1,10:11:15.02:197,15,0	1/1:2,22:24:57.19:750,57,0	1/1:2,18:20:54.14:691,54,0	0/0:7,0:7:21.05:0,21,226	0/0:26,0:26:72.18:0,72,774	0/0:4,0:4:12.03:0,12,129
chr10	102543464	.	CTGACTCAGCCGA	C	4815.21	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.572;DP=495;FS=1.939;HRun=0;HaplotypeScore=171.4921;InbreedingCoeff=0.9670;MQ=91.18;MQ0=0;MQRankSum=-7.863;QD=61.73;ReadPosRankSum=0.027;VQSLOD=4.4856;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:96.33:0,96,5326	0/0:10,0:10:30.08:0,30,1527	0/0:16,0:16:42.14:0,42,2002	0/0:25,0:25:63.21:0,63,2761	0/0:17,0:17:51.18:0,51,2855	0/0:22,0:22:66.23:0,66,4003	0/0:16,0:16:42.12:0,42,2305	1/1:9,13:22:39.09:1033,39,0	0/0:14,0:14:39.13:0,39,2351	0/0:15,0:15:45.15:0,45,2549	0/0:15,0:15:39.13:0,39,2239	0/0:16,0:16:45.15:0,45,2718	0/0:15,0:15:45.12:0,45,2178	0/0:17,0:17:48.16:0,48,2597	0/0:21,0:21:60.21:0,60,3592	0/0:13,0:13:36.12:0,36,2160	0/0:25,0:25:75.22:0,75,4009	0/0:20,0:20:60.21:0,60,3475	1/1:1,8:9:24.08:791,24,0	1/1:3,20:23:57.20:2142,57,0	1/1:7,6:13:5.61:172,6,0	0/0:16,0:16:48.16:0,48,2808	0/0:17,0:17:42.14:0,42,2411	0/0:23,0:23:69.24:0,69,3805	0/0:28,0:28:84.28:0,84,4454	0/0:18,0:18:51.18:0,51,3066	1/1:1,10:11:18.06:677,18,0	0/0:5,0:5:15.05:0,15,919
chr10	102545568	.	TACACACACACAC	T	2717.34	PASS	AC=28;AF=0.538;AN=52;BaseQRankSum=5.983;DP=484;FS=65.602;HRun=0;HaplotypeScore=158.1043;InbreedingCoeff=0.6992;MQ=57.48;MQ0=6;MQRankSum=-5.950;QD=12.19;ReadPosRankSum=2.186;VQSLOD=0.6699;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:48.14:0,48,2030	0/0:9,0:11:9.03:0,9,483	./.	./.	0/0:16,0:16:12.04:0,12,604	1/1:13,8:21:6.02:199,6,0	1/1:15,1:15:3.01:96,3,0	0/0:19,0:18:14.41:0,14,308	1/1:19,0:23:2.60:83,3,0	0/0:20,0:20:30.09:0,30,1000	0/0:13,0:15:6.02:0,6,274	0/0:17,0:18:12.04:0,12,460	1/1:9,7:16:8.95:286,9,0	1/1:8,0:8:2.32:88,2,0	1/1:15,9:24:21.07:681,21,0	0/0:16,0:16:9.03:0,9,412	1/1:12,4:16:9.03:309,9,0	1/1:16,0:15:9:113,9,0	0/0:9,0:9:3.01:0,3,130	0/0:14,0:17:24.08:0,24,781	0/0:33,0:31:35.91:0,36,1230	1/1:14,0:16:12.04:247,12,0	1/1:8,4:12:0.89:2,1,0	1/1:14,5:19:3.01:103,3,0	1/1:10,5:15:14.26:398,14,0	1/1:13,0:17:9.33:213,9,0	0/0:6,0:8:6.02:0,6,232	1/1:1,0:4:3.01:84,3,0
chr10	102546013	.	CA	C	13509.14	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=8.526;DP=626;FS=1.469;HRun=2;HaplotypeScore=78.8617;InbreedingCoeff=0.9998;MQ=86.77;MQ0=0;MQRankSum=-4.440;QD=32.71;ReadPosRankSum=4.407;VQSLOD=4.9044;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,1855	0/0:13,0:13:39.09:0,39,521	0/0:37,0:35:89.63:0,90,1179	0/0:27,1:27:65.09:0,65,813	0/0:14,0:14:39.12:0,39,549	1/1:1,14:15:36.12:462,36,0	1/1:0,22:22:57.19:738,57,0	1/1:0,32:32:96.18:1101,96,0	1/1:0,25:25:60.20:777,60,0	0/0:19,0:19:57.18:0,57,807	0/0:17,0:17:42.08:0,42,544	0/0:19,0:19:57.15:0,57,770	1/1:1,14:15:39.06:484,39,0	1/1:0,21:21:54.17:696,54,0	1/1:0,22:22:60.17:757,60,0	0/0:20,0:20:54.16:0,54,752	1/1:0,20:20:54.18:699,54,0	1/1:0,16:16:36.12:466,36,0	1/1:2,29:31:78.19:953,78,0	1/1:1,21:22:54.17:693,54,0	1/1:1,31:32:75.24:971,75,0	1/1:0,17:17:39.13:502,39,0	1/1:0,16:16:36.12:466,36,0	1/1:0,29:29:66.21:855,66,0	1/1:2,20:22:42.16:757,42,0	1/1:0,24:24:72.18:890,72,0	1/1:0,22:22:66.21:852,66,0	1/1:0,10:10:30.10:389,30,0
chr10	102549084	.	C	CAA	3675.05	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.423;DP=723;FS=8.939;HRun=8;HaplotypeScore=86.5883;InbreedingCoeff=0.9944;MQ=84.15;MQ0=0;MQRankSum=-0.475;QD=31.14;ReadPosRankSum=-1.804;VQSLOD=2.8123;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,1335	0/0:5,0:5:15.04:0,15,167	0/0:44,0:43:89.63:0,90,944	0/0:24,0:23:18.41:0,18,434	0/0:31,0:31:81.18:0,81,892	0/0:33,0:33:84.21:0,84,935	0/0:26,0:26:69.15:0,69,755	1/1:6,23:30:72.23:1102,72,0	0/0:29,0:29:81.22:0,81,900	0/0:25,0:25:63.14:0,63,702	0/0:22,0:22:57.13:0,57,623	0/0:28,0:28:69.17:0,69,769	0/0:31,0:31:81.20:0,81,902	0/0:20,0:20:45.09:0,45,501	0/0:26,0:26:66.14:0,66,724	0/0:26,0:26:72.16:0,72,791	0/0:26,0:26:57.12:0,57,634	0/0:14,0:14:42.11:0,42,468	1/1:3,15:21:50.13:695,50,0	1/1:2,21:24:57.11:822,57,0	1/1:1,18:19:39.13:619,39,0	0/0:27,0:27:78.14:0,78,852	0/0:27,0:27:66.16:0,66,734	0/0:31,0:31:87.18:0,87,937	0/0:12,0:12:33.09:0,33,366	0/0:34,0:34:87.22:0,87,968	1/1:6,17:24:29.59:438,30,0	0/0:20,0:21:45.05:0,45,559
chr10	102549655	.	T	TCA	1182.22	PASS	AB=1.000;AC=32;AF=0.696;AN=46;BaseQRankSum=0.799;DP=484;FS=10.712;HRun=0;HaplotypeScore=88.7412;InbreedingCoeff=0.5556;MQ=66.97;MQ0=13;MQRankSum=0.665;QD=4.06;ReadPosRankSum=-0.786;VQSLOD=1.5978;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:27:5.45:0,5,37	0/0:5,0:5:6.01:0,6,64	./.	./.	0/0:14,0:15:8.85:0,9,78	1/1:14,0:13:8.98:99,9,0	1/1:30,0:28:7.11:104,7,0	0/1:20,0:19:0:0,0,0	1/1:9,0:13:2.62:26,3,0	0/0:10,0:8:3.01:0,3,32	0/0:15,0:14:3.48:0,3,33	./.	1/1:11,0:11:5.93:44,6,0	1/1:14,0:13:14.57:118,15,0	1/1:13,0:13:8.99:86,9,0	0/1:3,0:5:1.25:1,0,38	1/1:15,12:28:18.06:265,18,0	0/0:19,0:23:13.72:0,14,63	./.	1/1:13,0:13:6.01:69,6,0	1/1:28,5:34:9.03:132,9,0	1/1:10,0:10:5.99:51,6,0	1/1:9,0:8:11.92:102,12,0	1/1:39,0:39:22.37:156,22,0	1/1:15,0:13:2.99:24,3,0	1/1:15,0:15:4.72:31,5,0	./.	1/1:5,0:5:3.45:22,3,0
chr10	102550000	.	A	ACTT	9050.77	PASS	AB=0.580;AC=13;AF=0.232;AN=56;BaseQRankSum=-0.339;DP=641;FS=1.538;HRun=0;HaplotypeScore=90.6651;InbreedingCoeff=0.8995;MQ=72.75;MQ0=0;MQRankSum=-4.550;QD=58.77;ReadPosRankSum=-2.956;VQSLOD=5.8215;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1729	0/0:9,0:9:27.09:0,27,461	0/0:22,0:22:51.62:0,52,913	0/0:17,0:17:48.05:0,48,743	0/0:21,0:21:63.22:0,63,1072	0/0:30,0:30:90.31:0,90,1509	0/0:20,0:20:57.19:0,57,972	1/1:8,17:25:66.21:1437,66,0	0/0:17,0:17:51.17:0,51,870	0/0:33,0:32:96.33:0,96,1624	0/0:24,0:24:69.24:0,69,1154	0/0:17,0:17:51.17:0,51,867	0/0:25,0:25:75.22:0,75,1248	0/0:17,0:17:51.16:0,51,843	0/0:25,0:25:75.26:0,75,1266	0/0:27,0:27:81.26:0,81,1355	0/0:23,0:23:66.21:0,66,1071	0/0:28,0:28:81.26:0,81,1353	1/1:4,17:22:66.20:1427,66,0	1/1:1,26:28:84.24:1827,84,0	1/1:2,11:13:33.07:707,33,0	0/0:17,0:17:45.15:0,45,754	0/0:18,0:18:54.18:0,54,920	0/0:20,0:20:57.19:0,57,966	0/0:41,0:41:99:0,114,1928	0/1:8,20:29:99:1486,0,120	1/1:4,20:25:72.16:1527,72,0	1/1:2,8:12:30.06:640,30,0
chr10	102551176	.	TACACACAC	T	1775.23	PASS	AB=0.722;AC=16;AF=0.400;AN=40;BaseQRankSum=1.220;DP=189;FS=0.000;HRun=0;HaplotypeScore=68.5373;InbreedingCoeff=0.5014;MQ=61.48;MQ0=3;MQRankSum=-2.517;QD=20.89;ReadPosRankSum=0.036;VQSLOD=2.4026;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:12:9.03:0,9,336	0/0:1,0:1:3.01:0,3,126	0/0:21,0:10:6.02:0,6,192	0/0:11,0:3:3.01:0,3,58	0/0:1,0:1:3.01:0,3,119	1/1:5,0:5:2.99:24,3,0	0/1:5,2:7:16.97:64,0,17	1/1:20,11:31:30.08:640,30,0	1/1:4,0:4:9:96,9,0	0/0:4,0:4:9.03:0,9,306	./.	0/0:6,0:6:9.03:0,9,370	0/1:2,0:4:8.97:44,0,9	./.	./.	0/0:2,0:2:6.02:0,6,251	0/0:25,0:25:39:0,39,711	0/0:11,0:11:19.89:0,20,328	1/1:4,3:6:9.03:187,9,0	./.	1/1:5,0:5:2.99:24,3,0	0/0:0,0:1:2.90:0,3,16	./.	./.	./.	1/1:14,0:16:33.11:620,33,0	./.	1/1:6,0:5:12.04:223,12,0
chr10	102551188	.	CACACACACACACACATATATAT	C	2603.28	PASS	AC=4;AF=0.083;AN=48;BaseQRankSum=2.834;DP=175;FS=19.719;HRun=0;HaplotypeScore=100.7075;InbreedingCoeff=0.4431;MQ=48.38;MQ0=3;MQRankSum=-5.137;QD=144.63;ReadPosRankSum=3.513;VQSLOD=2.1687;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:12.04:0,12,1121	0/0:1,0:1:3.01:0,3,317	0/0:17,0:6:12.04:0,12,496	0/0:9,0:2:3.01:0,3,126	0/0:1,0:1:3.01:0,3,313	0/0:5,0:5:6:0,6,72	0/0:7,0:7:11.16:0,11,249	0/0:25,0:25:49.91:0,50,1346	0/0:3,0:3:9.02:0,9,122	0/0:4,0:4:12.04:0,12,807	./.	0/0:5,0:5:15.02:0,15,995	0/0:5,0:5:12.03:0,12,514	./.	0/0:1,0:1:3.01:0,3,50	0/0:3,0:3:9.03:0,9,840	0/0:24,0:24:45.15:0,45,3096	0/0:10,0:10:27.06:0,27,1460	0/0:10,0:9:27.09:0,27,984	./.	0/0:5,0:5:5.99:0,6,72	0/0:1,0:1:3.01:0,3,207	./.	0/0:2,0:2:2.99:0,3,24	0/0:1,0:1:3.01:0,3,128	1/1:4,9:13:36.11:1973,36,0	0/0:5,0:5:9.03:0,9,224	1/1:1,4:4:12.04:741,12,0
chr10	102551198	.	C	CAT	434.72	PASS	AB=0.848;AC=10;AF=0.238;AN=42;BaseQRankSum=-0.988;DP=133;FS=2.419;HRun=0;HaplotypeScore=42.6113;InbreedingCoeff=0.2428;MQ=48.68;MQ0=4;MQRankSum=2.094;QD=8.36;ReadPosRankSum=3.128;VQSLOD=3.1504;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:38.84:39,0,48	0/0:1,0:1:3.01:0,3,45	0/0:10,0:2:6.02:0,6,80	0/0:6,0:2:2.97:0,3,20	0/0:1,0:1:3:0,3,25	./.	0/0:3,0:3:0.06:0,0,0	0/0:16,0:16:27.26:0,27,172	0/1:1,0:1:0:0,0,0	0/0:3,0:3:9.03:0,9,131	0/0:1,0:1:2.84:0,3,14	0/0:3,0:3:9.02:0,9,104	1/1:4,0:4:3.88:27,4,0	./.	./.	0/0:3,0:3:9.02:0,9,116	0/1:11,14:25:2.06:375,0,2	0/1:6,3:9:67.47:78,0,67	0/0:8,0:6:14.88:0,15,109	./.	./.	1/1:1,0:1:0.47:1,0,0	./.	./.	1/1:1,0:1:2.99:24,3,0	0/0:13,0:13:33.11:0,33,158	0/0:3,0:3:3:0,3,25	0/0:5,0:4:11.36:0,11,56
chr10	102551283	.	TAA	T	2060.32	PASS	AB=0.711;AC=14;AF=0.250;AN=56;BaseQRankSum=4.661;DP=259;FS=11.350;HRun=12;HaplotypeScore=39.7841;InbreedingCoeff=0.7208;MQ=88.80;MQ0=0;MQRankSum=-0.145;QD=20.00;ReadPosRankSum=-0.887;VQSLOD=0.8834;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:20:47.13:0,47,637	0/0:2,0:2:6.02:0,6,90	0/0:26,0:17:20.99:0,21,242	0/1:14,2:14:35.71:36,0,52	0/0:9,0:9:27.09:0,27,403	0/0:4,0:4:9.03:0,9,134	0/0:8,0:8:21.07:0,21,313	1/1:2,14:16:33.03:335,33,0	0/0:5,0:5:15:0,15,180	0/0:3,0:5:14.51:0,15,149	0/0:10,0:11:29.58:0,30,393	0/0:3,0:3:8.52:0,9,98	0/0:3,0:3:9.03:0,9,134	0/0:1,0:1:3.01:0,3,45	0/0:4,0:4:12.04:0,12,179	0/0:7,0:7:18.06:0,18,268	0/0:16,0:19:53.65:0,54,737	0/0:8,0:12:35.08:0,35,432	1/1:2,8:10:24.02:239,24,0	0/1:1,7:8:4.64:162,0,5	1/1:0,11:11:33.07:336,33,0	0/0:3,0:3:9.02:0,9,115	0/0:6,0:6:18.05:0,18,247	0/0:2,0:2:6.02:0,6,90	0/0:6,0:6:15.04:0,15,204	1/1:3,15:18:45.07:458,45,0	1/1:1,7:9:23.79:226,24,0	1/1:0,15:15:45.10:458,45,0
chr10	102551410	.	A	AG	1196.23	PASS	AB=0.833;AC=12;AF=0.214;AN=56;BaseQRankSum=7.950;DP=416;FS=27.500;HRun=0;HaplotypeScore=60.6184;InbreedingCoeff=0.7444;MQ=74.59;MQ0=14;MQRankSum=-4.521;QD=12.46;ReadPosRankSum=1.210;VQSLOD=2.0490;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:70.79:0,71,780	0/0:4,0:4:9.01:0,9,94	0/0:45,0:15:19.94:0,20,139	0/0:31,0:13:14.01:0,14,96	0/0:9,0:9:26.95:0,27,242	0/0:20,0:20:53.89:0,54,517	0/0:8,0:8:22.17:0,22,199	1/1:9,24:33:78.50:717,79,0	0/0:7,0:7:16.57:0,17,153	0/0:8,0:8:18:0,18,185	0/0:11,0:9:26.84:0,27,229	0/0:8,0:8:18:0,18,187	0/0:3,0:3:9.03:0,9,115	0/0:14,0:14:35.88:0,36,312	0/0:10,0:10:27.01:0,27,293	0/0:10,0:9:22.34:0,22,253	0/0:35,0:34:83.87:0,84,889	0/0:20,0:19:41.86:0,42,456	0/1:8,8:16:3.48:251,0,3	1/1:0,5:5:8.86:67,9,0	0/1:7,0:7:2.17:37,0,2	0/0:13,0:13:29.94:0,30,299	0/0:5,0:5:6.86:0,7,62	0/0:17,0:17:47.94:0,48,574	0/0:8,0:7:19.56:0,20,202	1/1:13,0:12:1.68:36,2,0	1/1:1,10:11:20.95:208,21,0	1/1:11,0:11:8.43:45,8,0
chr10	102551419	.	AG	A	1422.88	PASS	AB=0.983;AC=22;AF=0.393;AN=56;BaseQRankSum=9.315;DP=421;FS=10.079;HRun=1;HaplotypeScore=59.4063;InbreedingCoeff=0.2742;MQ=76.47;MQ0=9;MQRankSum=-5.876;QD=6.87;ReadPosRankSum=-0.744;VQSLOD=-0.6152;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:45.49:0,45,467	0/0:4,0:4:8.96:0,9,79	0/0:34,2:14:9.92:0,10,144	0/0:28,1:14:0.79:0,1,115	0/0:11,0:11:14.40:0,14,150	0/1:16,0:16:37.59:38,0,149	0/0:14,0:14:40.46:0,40,285	1/1:33,0:33:80.51:519,81,0	0/0:10,0:10:22.02:0,22,198	0/1:6,0:6:4.41:4,0,56	0/1:10,0:9:19.97:20,0,90	0/1:9,0:9:38.90:39,0,51	0/0:5,0:5:0.76:0,1,69	0/1:12,0:12:6.37:6,0,99	0/0:12,0:12:23.02:0,23,221	0/0:9,0:8:21.55:0,22,163	0/0:33,0:33:34.83:0,35,546	0/1:19,0:18:16.55:17,0,258	1/1:21,0:21:26.95:332,27,0	1/1:7,0:7:13.93:84,14,0	0/1:4,1:5:2.86:15,0,3	0/1:15,0:15:38.40:38,0,172	0/1:6,0:6:7.10:7,0,46	0/0:16,1:17:33.40:0,33,333	0/1:8,0:7:0.55:1,0,90	1/1:14,0:13:29.30:141,29,0	1/1:12,0:12:26.32:178,26,0	1/1:13,1:14:32.78:167,33,0
chr10	102551420	.	G	GAA	2282.91	PASS	AB=0.967;AC=14;AF=0.250;AN=56;BaseQRankSum=6.181;DP=423;FS=0.493;HRun=16;HaplotypeScore=65.2879;InbreedingCoeff=0.7553;MQ=76.37;MQ0=8;MQRankSum=-3.822;QD=15.85;ReadPosRankSum=-0.230;VQSLOD=2.6205;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:62.60:0,63,668	0/0:4,0:4:11.99:0,12,124	0/1:36,0:14:1.36:1,0,169	0/0:29,0:14:22.97:0,23,221	0/0:11,0:11:26.94:0,27,302	0/0:16,0:16:29.96:0,30,317	0/0:14,0:14:39.08:0,39,425	1/1:32,1:33:84.21:1059,84,0	0/0:10,0:10:23.85:0,24,257	0/0:6,0:6:14.63:0,15,132	0/0:10,0:9:20.72:0,21,235	0/0:9,0:9:9.37:0,9,104	0/0:5,0:5:9:0,9,94	0/0:12,0:12:17.86:0,18,180	0/0:12,0:12:33.06:0,33,363	0/0:9,0:8:21.02:0,21,238	0/0:32,0:32:68.91:0,69,757	0/0:18,0:18:35.60:0,36,414	1/1:21,0:21:51.10:711,51,0	1/1:8,0:8:18.06:246,18,0	1/1:2,3:5:3.01:42,3,0	0/0:15,0:15:28.51:0,29,297	0/0:6,0:6:6.02:0,6,69	0/0:18,0:18:35.78:0,36,371	0/0:9,0:8:15:0,15,166	0/1:13,0:13:4.34:21,0,4	1/1:13,0:14:27.06:348,27,0	1/1:13,0:13:3.68:28,4,0
chr10	102552287	.	G	GAAA	12779.82	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=10.985;DP=554;FS=25.543;HRun=0;HaplotypeScore=160.2202;InbreedingCoeff=0.8936;MQ=67.29;MQ0=1;MQRankSum=-8.688;QD=31.63;ReadPosRankSum=8.477;VQSLOD=3.3238;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:42.10:0,42,615	0/0:8,0:8:7.03:0,7,285	0/0:17,0:15:32.78:0,33,473	0/1:12,0:12:5.31:5,0,371	0/0:26,0:26:59.79:0,60,979	1/1:20,0:20:59.61:610,60,0	1/1:22,1:22:62.43:737,62,0	1/1:23,0:23:68.83:697,69,0	1/1:20,1:21:61.21:621,61,0	0/0:15,0:15:40.31:0,40,652	0/0:10,0:10:24.08:0,24,425	0/0:21,0:21:51.07:0,51,802	1/1:28,0:28:70.38:666,70,0	1/1:19,0:19:53.61:572,54,0	1/1:20,0:20:59.22:578,59,0	0/0:19,0:19:57.19:0,57,1007	1/1:27,0:27:74.71:865,75,0	1/1:23,1:24:69.14:879,69,0	1/1:16,4:20:60.02:872,60,0	1/1:22,0:22:62.81:799,63,0	1/1:22,0:22:50.74:553,51,0	1/1:14,1:15:44.67:490,45,0	1/1:17,0:17:47.66:560,48,0	1/1:23,0:23:68.53:813,69,0	1/1:24,1:25:71.83:892,72,0	1/1:26,0:26:77.75:1038,78,0	1/1:16,0:16:47.69:495,48,0	1/1:1,0:1:3.01:38,3,0
chr10	102552596	.	AT	A	12813.45	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=20.481;DP=717;FS=2.710;HRun=3;HaplotypeScore=116.4347;InbreedingCoeff=0.9686;MQ=89.07;MQ0=0;MQRankSum=-3.693;QD=32.85;ReadPosRankSum=5.091;VQSLOD=4.2508;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,54:55:99:1907,159,0	0/0:12,1:13:3.19:0,3,481	0/0:36,0:36:99:0,102,1405	0/0:21,0:21:62.54:0,63,841	0/0:20,0:20:54.18:0,54,774	1/1:1,15:16:42.13:504,42,0	1/1:0,31:31:90.28:1080,90,0	0/0:34,0:34:99:0,102,1436	1/1:1,23:24:60.18:720,60,0	0/0:28,0:28:81.27:0,81,1166	0/0:10,0:10:30.08:0,30,405	0/0:31,0:31:93.31:0,93,1338	1/1:1,17:18:48.15:575,48,0	1/1:0,22:22:60.18:720,60,0	1/1:1,35:36:99:1188,99,0	0/0:30,0:30:84.27:0,84,1190	1/1:0,47:47:99:1548,129,0	1/1:0,23:23:69.21:828,69,0	0/0:15,0:15:45.15:0,45,647	0/0:21,0:21:57.18:0,57,803	0/0:36,0:36:99:0,102,1431	1/1:3,16:19:45.14:540,45,0	1/1:5,21:26:57.01:684,57,0	1/1:1,29:30:84.26:1008,84,0	1/1:0,18:18:54.17:648,54,0	1/1:0,21:21:63.19:756,63,0	0/0:32,0:32:96.32:0,96,1380	1/1:0,4:4:9.03:108,9,0
chr10	102553022	.	C	CG	7376.92	PASS	AB=0.519;AC=13;AF=0.232;AN=56;BaseQRankSum=10.935;DP=650;FS=0.329;HRun=0;HaplotypeScore=84.4501;InbreedingCoeff=0.9059;MQ=86.38;MQ0=0;MQRankSum=-5.108;QD=41.21;ReadPosRankSum=-1.136;VQSLOD=4.7920;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,150,2037	0/0:13,0:13:39.13:0,39,545	0/0:28,0:28:72.23:0,72,990	0/0:19,0:19:51.09:0,51,623	0/0:22,0:22:63:0,63,851	0/0:19,0:19:57.17:0,57,765	0/0:18,0:18:54.14:0,54,705	1/1:1,26:27:81.27:1271,81,0	0/0:14,0:14:42.12:0,42,554	0/0:29,0:29:87.29:0,87,1213	0/0:20,0:20:57.15:0,57,747	0/0:14,0:14:42.14:0,42,587	0/0:23,0:23:69.21:0,69,927	0/0:23,0:23:69.21:0,69,945	0/0:18,0:18:54.18:0,54,753	0/0:23,0:23:69.22:0,69,947	0/0:38,0:38:99:0,114,1593	0/0:24,0:24:72.21:0,72,972	1/1:3,17:20:57.19:889,57,0	1/1:1,23:24:56.91:820,57,0	1/1:2,29:31:78.26:1218,78,0	0/0:23,0:23:69.22:0,69,943	0/0:16,0:16:45.14:0,45,611	0/0:13,0:13:39.13:0,39,545	0/0:24,0:24:72.23:0,72,990	0/1:3,37:40:11.49:1526,0,11	1/1:3,27:30:84.28:1318,84,0	1/1:0,7:7:21.07:335,21,0
chr10	102553057	.	AG	A	4501.05	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.946;DP=626;FS=3.776;HRun=2;HaplotypeScore=82.1413;InbreedingCoeff=0.9990;MQ=89.64;MQ0=0;MQRankSum=-6.241;QD=34.89;ReadPosRankSum=-3.387;VQSLOD=3.8237;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,1898	0/0:12,0:12:36.12:0,36,538	0/0:28,0:28:74.81:0,75,986	0/0:22,0:22:54.33:0,54,788	0/0:26,0:26:78.26:0,78,1166	0/0:18,0:18:54.18:0,54,809	0/0:20,0:20:60.18:0,60,851	1/1:2,33:35:99:1274,99,0	0/0:17,0:17:51.16:0,51,743	0/0:20,0:20:60.20:0,60,893	0/0:26,0:26:75.24:0,75,1103	0/0:15,0:15:45.14:0,45,643	0/0:16,0:16:45.15:0,45,674	0/0:18,0:18:51.17:0,51,761	0/0:27,0:27:81.27:0,81,1214	0/0:20,0:20:60.16:0,60,872	0/0:28,0:28:81.25:0,81,1188	0/0:25,0:25:69.23:0,69,1033	1/1:1,22:23:63.20:804,63,0	1/1:0,21:21:63.09:767,63,0	1/1:5,18:23:63.09:750,63,0	0/0:15,0:15:45.13:0,45,629	0/0:14,0:14:42.06:0,42,600	0/0:18,0:18:54.17:0,54,788	0/0:25,0:25:75.23:0,75,1101	0/0:35,0:35:99:0,99,1464	1/1:1,26:27:72.19:906,72,0	0/0:7,0:7:21.07:0,21,310
chr10	102554363	.	TA	T	1083.68	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.992;DP=608;FS=0.669;HRun=3;HaplotypeScore=57.3904;InbreedingCoeff=0.9968;MQ=65.36;MQ0=0;MQRankSum=-0.962;QD=30.96;ReadPosRankSum=-0.469;VQSLOD=3.0476;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1579	0/0:11,0:11:33.10:0,33,459	0/0:11,0:9:25.88:0,26,318	0/0:13,0:12:33.11:0,33,475	0/0:20,0:20:60.20:0,60,864	0/0:23,0:23:69.23:0,69,994	0/0:25,0:25:75.22:0,75,1034	0/0:31,0:31:87.75:0,88,1217	0/0:14,0:14:39.13:0,39,562	0/0:35,0:35:99:0,99,1407	0/0:27,0:27:75.24:0,75,1060	0/0:15,0:15:45.15:0,45,648	0/0:13,0:13:39.13:0,39,560	0/0:25,0:25:75.25:0,75,1078	0/0:23,0:23:69.22:0,69,976	0/0:19,0:19:48.15:0,48,675	0/0:33,0:33:99:0,99,1404	0/0:21,0:21:60.17:0,60,837	0/0:19,0:19:57.18:0,57,790	0/0:28,0:28:84.26:0,84,1173	0/0:21,0:21:60.19:0,60,847	0/0:15,0:15:42.14:0,42,604	0/0:22,0:22:66.22:0,66,950	0/0:15,0:15:42.13:0,42,587	0/0:28,0:28:84.28:0,84,1209	1/1:0,27:27:78.22:944,78,0	0/0:27,0:27:81.26:0,81,1145	1/1:1,7:8:21.07:260,21,0
chr10	102555640	.	TTCTC	T	1107.85	PASS	AB=1.000;AC=26;AF=0.520;AN=50;BaseQRankSum=-0.213;DP=545;FS=16.309;HRun=0;HaplotypeScore=96.1996;InbreedingCoeff=0.3741;MQ=64.61;MQ0=22;MQRankSum=1.809;QD=3.81;ReadPosRankSum=2.845;VQSLOD=0.6499;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:28:31.96:32,0,123	1/1:7,0:7:0.85:3,1,0	./.	./.	0/0:16,0:16:3.01:0,3,45	1/1:21,0:21:7.27:33,7,0	0/0:24,0:24:12.48:0,12,148	0/0:30,0:30:1.82:0,2,5	1/1:16,0:15:8.97:71,9,0	1/1:20,0:20:4.05:88,4,0	1/1:12,0:12:3.01:36,3,0	0/0:13,0:12:9.50:0,10,150	1/1:10,0:9:2.93:44,3,0	1/1:16,0:15:2.78:43,3,0	1/1:15,0:15:3:44,3,0	0/1:23,0:22:0.58:46,0,1	1/1:21,0:19:4.16:43,4,0	0/1:23,0:21:19.76:190,0,20	0/0:22,0:22:6.49:0,6,94	0/0:17,0:17:5.36:0,5,32	0/1:36,0:33:35.95:36,0,41	0/0:9,5:14:0.47:0,0,1	./.	1/1:23,0:20:26.78:342,27,0	1/1:17,0:15:15.05:213,15,0	0/0:31,0:31:27.01:0,27,343	0/0:15,0:14:15.05:0,15,232	0/0:13,0:14:7.85:0,8,82
chr10	102555690	.	CTGTGTGTGTGTGTG	C	773.01	PASS	AB=1.000;AC=10;AF=0.192;AN=52;BaseQRankSum=5.096;DP=578;FS=1.058;HRun=0;HaplotypeScore=184.7586;InbreedingCoeff=0.5423;MQ=40.92;MQ0=82;MQRankSum=-5.270;QD=6.44;ReadPosRankSum=-0.287;VQSLOD=2.4716;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:31:39.13:0,39,2126	0/0:3,0:3:3.01:0,3,57	./.	./.	0/0:11,0:9:3.01:0,3,115	0/0:21,0:20:12.51:0,13,672	0/0:24,0:23:23.21:0,23,1131	1/1:17,0:23:16.12:102,16,0	0/0:13,0:9:6.96:0,7,331	0/0:19,0:16:29.53:0,30,1095	0/0:16,0:15:21.51:0,22,1017	0/0:13,0:12:12.04:0,12,268	0/0:25,0:19:40.64:0,41,1468	0/0:23,0:20:18.53:0,19,983	0/0:18,0:17:18.53:0,19,945	0/0:27,0:24:28.03:0,28,1322	0/0:29,0:22:30.10:0,30,895	0/0:27,0:20:22.57:0,23,657	1/1:11,3:13:12.01:383,12,0	1/1:8,10:16:5.56:115,6,0	0/0:33,9:29:2.89:0,3,39	0/0:25,0:21:9.03:0,9,435	0/0:11,0:8:5.70:0,6,325	0/0:53,0:43:45.73:0,46,2212	0/0:19,0:15:18.06:0,18,1002	0/1:28,0:23:81.02:81,0,202	1/1:13,9:18:5.80:232,6,0	0/1:11,0:9:5.25:5,0,47
chr10	102555729	.	TGTGTGTG	T	445.64	PASS	AB=0.967;AC=5;AF=0.089;AN=56;BaseQRankSum=6.986;DP=616;FS=12.212;HRun=0;HaplotypeScore=141.9997;InbreedingCoeff=0.1761;MQ=50.49;MQ0=63;MQRankSum=-4.869;QD=6.65;ReadPosRankSum=3.621;VQSLOD=1.9030;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:32:63.16:0,63,1706	0/0:7,0:7:15.05:0,15,247	0/0:28,0:10:30:0,30,322	0/0:24,0:12:33.10:0,33,422	0/0:14,0:12:21.07:0,21,300	0/0:19,0:19:4.65:0,5,650	0/0:25,0:23:49.10:0,49,1167	0/0:37,0:32:70.47:0,70,916	0/0:15,0:14:33.58:0,34,575	0/0:18,0:16:42.14:0,42,862	0/0:19,0:19:44.89:0,45,892	0/0:21,0:20:39.09:0,39,576	0/0:22,0:17:42.14:0,42,1043	0/0:24,0:23:54.65:0,55,1144	0/0:18,0:17:30.10:0,30,767	0/0:20,0:18:45.62:0,46,1101	0/0:29,0:24:60.07:0,60,911	0/0:31,0:25:24.33:0,24,736	0/1:10,0:8:74.65:82,0,75	0/0:17,0:15:7.97:0,8,118	0/0:32,0:22:13.11:0,13,162	0/0:16,0:13:18.06:0,18,385	0/0:20,0:17:44.95:0,45,736	0/0:43,0:36:75.66:0,76,1863	0/0:13,0:12:29.97:0,30,804	0/1:24,3:23:99:330,0,195	0/1:22,0:20:31.59:32,0,361	1/1:7,1:6:2.66:114,3,0
chr10	102555735	.	TG	T	87.44	PASS	AB=0.833;AC=3;AF=0.054;AN=56;BaseQRankSum=5.792;DP=619;FS=4.074;HRun=2;HaplotypeScore=96.4762;InbreedingCoeff=0.5349;MQ=52.76;MQ0=52;MQRankSum=-4.485;QD=2.65;ReadPosRankSum=0.185;VQSLOD=-0.2098;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:29:69.09:0,69,902	0/0:7,0:7:18.06:0,18,239	0/0:31,0:13:39.02:0,39,437	0/0:31,0:19:52.62:0,53,668	0/0:12,1:11:21.02:0,21,257	0/0:19,0:19:35.62:0,36,454	0/0:24,1:25:54.42:0,54,743	0/0:41,0:36:82.51:0,83,1075	0/0:16,0:15:36.12:0,36,488	0/0:18,0:17:51.17:0,51,683	0/0:20,0:20:50.75:0,51,602	0/0:21,0:21:44.64:0,45,519	0/0:20,0:16:42.12:0,42,563	0/0:27,0:26:63.21:0,63,858	0/0:17,0:16:36.05:0,36,467	0/0:21,0:19:48.09:0,48,636	0/0:29,0:24:59.41:0,59,540	0/0:29,0:27:73.24:0,73,784	0/0:11,0:9:19.22:0,19,158	0/0:17,0:15:8.61:0,9,119	0/0:31,0:23:19.38:0,19,240	0/0:14,0:11:17.99:0,18,220	0/0:20,0:17:44.80:0,45,607	0/0:37,0:32:80.09:0,80,1063	0/0:15,0:14:35.96:0,36,492	0/1:20,5:22:99:113,0,105	0/0:22,0:20:37.76:0,38,453	1/1:8,0:6:7.53:70,8,0
chr10	102556897	.	A	AGT	5744.34	PASS	AB=0.684;AC=28;AF=0.500;AN=56;BaseQRankSum=-6.069;DP=585;FS=0.448;HRun=0;HaplotypeScore=103.7258;InbreedingCoeff=0.2238;MQ=64.88;MQ0=7;MQRankSum=0.157;QD=14.11;ReadPosRankSum=0.626;VQSLOD=4.2420;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:15:13.16:105,0,13	0/0:5,0:5:15.04:0,15,170	0/0:27,0:21:14.94:0,15,132	0/0:18,0:9:8.97:0,9,82	0/0:26,0:27:47.84:0,48,495	1/1:10,16:27:2.08:471,2,0	0/1:8,3:11:18.82:167,0,19	1/1:35,0:34:5.32:71,5,0	0/1:8,9:16:41.01:295,0,41	0/0:25,0:25:42.10:0,42,456	0/0:19,0:21:38.94:0,39,422	0/0:16,0:17:12.67:0,13,341	0/1:8,5:14:92.11:160,0,92	0/1:9,11:25:33.52:402,0,34	0/1:7,16:25:72.42:571,0,72	0/0:22,0:22:44.86:0,45,487	1/1:6,17:23:51.13:741,51,0	1/1:10,10:19:22.13:326,22,0	1/1:16,0:22:13.72:118,14,0	1/1:19,0:34:16.99:114,17,0	1/1:17,0:17:11.96:109,12,0	1/1:9,16:24:8.07:561,8,0	0/1:6,11:18:28.51:335,0,29	0/1:9,14:22:6.69:425,0,7	0/1:9,18:26:30.42:531,0,30	0/0:16,0:16:22.73:0,23,112	1/1:11,1:21:24:213,24,0	0/1:7,0:7:28.70:29,0,30
chr10	102556912	.	GTGTGTGTGTGTGTGTA	G	1469.29	PASS	AB=0.545;AC=3;AF=0.054;AN=56;BaseQRankSum=5.003;DP=614;FS=2.137;HRun=0;HaplotypeScore=247.3240;InbreedingCoeff=0.6424;MQ=60.63;MQ0=13;MQRankSum=-3.724;QD=56.51;ReadPosRankSum=1.674;VQSLOD=2.8982;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:45.15:0,45,2090	0/0:6,0:6:18.06:0,18,1299	0/0:35,0:20:38.10:0,38,1863	0/0:28,0:12:33.11:0,33,1356	0/0:27,0:27:72.25:0,72,4313	0/0:28,0:28:60.08:0,60,3330	0/0:13,0:13:36.06:0,36,1480	0/0:30,0:29:81.27:0,81,3044	0/0:16,0:15:36.12:0,36,2212	0/0:20,0:20:54.17:0,54,3632	0/0:22,0:22:57.18:0,57,3572	0/0:19,0:19:48.84:0,49,3450	0/0:14,0:14:31.35:0,31,1914	0/0:25,0:25:57.20:0,57,3182	0/0:27,0:27:66.23:0,66,4333	0/0:23,0:23:61.50:0,61,3936	0/0:23,0:23:57.67:0,58,3690	0/0:21,0:20:45.13:0,45,2490	0/0:22,0:21:61.09:0,61,2303	0/0:36,0:36:48.98:0,49,2103	0/0:15,0:15:24.08:0,24,1056	0/0:27,0:26:60.10:0,60,3566	0/0:18,0:18:38.97:0,39,2629	0/0:22,0:21:39.12:0,39,2693	0/0:27,0:27:63.22:0,63,3674	1/1:2,12:14:32.93:1171,33,0	0/0:21,0:20:39.04:0,39,1982	0/1:2,10:12:99:404,0,108
chr10	102557047	.	TAAA	T	1320.68	PASS	AB=0.556;AC=11;AF=0.196;AN=56;BaseQRankSum=3.716;DP=504;FS=0.000;HRun=15;HaplotypeScore=78.5822;InbreedingCoeff=0.8695;MQ=77.36;MQ0=5;MQRankSum=-1.152;QD=13.34;ReadPosRankSum=2.235;VQSLOD=1.5343;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:66.18:0,66,1096	0/0:9,0:13:33:0,33,435	0/0:23,0:13:23.96:0,24,231	0/0:22,0:15:8.85:0,9,65	0/0:18,0:22:45.15:0,45,738	0/0:7,0:9:24.04:0,24,355	0/0:12,0:17:42.04:0,42,569	1/1:7,15:23:44.88:488,45,0	0/0:20,0:20:48.16:0,48,739	0/0:18,0:19:33.06:0,33,489	0/0:14,0:18:48.14:0,48,736	0/0:14,0:15:39.11:0,39,642	0/0:16,0:19:48.07:0,48,655	0/0:11,0:12:33.09:0,33,536	0/0:21,0:28:63.10:0,63,921	0/0:6,0:8:24.06:0,24,393	0/0:23,0:28:66.11:0,66,998	0/0:16,0:18:42.12:0,42,679	1/1:4,7:14:7.39:126,7,0	1/1:5,12:17:20.75:235,21,0	1/1:3,18:21:30:336,30,0	0/0:16,0:18:39.12:0,39,626	0/0:12,0:13:28.32:0,28,444	0/0:19,0:21:60.14:0,60,933	0/0:17,0:17:36.12:0,36,639	0/0:4,0:17:17.19:0,17,73	1/1:2,11:14:26.92:287,27,0	0/1:2,1:10:7.64:22,0,8
chr10	102558980	.	CTCTCTG	C	3540.80	PASS	AB=0.851;AC=29;AF=0.518;AN=56;BaseQRankSum=13.726;DP=690;FS=5.634;HRun=0;HaplotypeScore=170.6596;InbreedingCoeff=0.7829;MQ=53.46;MQ0=12;MQRankSum=-9.983;QD=9.20;ReadPosRankSum=3.416;VQSLOD=2.2673;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:72.16:0,72,1876	0/0:12,0:12:33.08:0,33,862	0/1:29,0:8:5.72:6,0,32	0/1:53,0:14:44.22:44,0,49	0/0:32,0:32:72.07:0,72,1347	1/1:15,0:15:17.85:128,18,0	1/1:20,0:20:14.84:102,15,0	0/0:43,0:42:83.35:0,83,1108	1/1:25,2:27:41.47:378,41,0	0/0:33,0:33:88.82:0,89,1865	0/0:18,0:18:42.05:0,42,895	0/0:27,0:27:61.68:0,62,1662	1/1:23,0:24:35.62:258,36,0	1/1:22,0:22:23.76:166,24,0	1/1:29,2:31:38.96:365,39,0	0/0:24,0:23:66.15:0,66,1802	1/1:22,0:22:17.91:140,18,0	1/1:8,0:7:13.70:87,14,0	0/0:17,0:17:38.03:0,38,651	0/0:22,0:22:13.71:0,14,357	0/0:25,0:24:21.04:0,21,440	1/1:23,0:23:8.71:59,9,0	1/1:28,1:29:26.66:180,27,0	1/1:24,0:24:11.60:123,12,0	1/1:21,1:22:23.82:214,24,0	1/1:4,23:26:71.97:1229,72,0	0/0:20,0:20:26.96:0,27,676	0/1:2,6:7:9.53:63,0,10
chr10	102558982	.	CTCTG	C	5480.10	PASS	AB=0.994;AC=29;AF=0.518;AN=56;BaseQRankSum=13.531;DP=682;FS=8.712;HRun=0;HaplotypeScore=145.9496;InbreedingCoeff=0.7594;MQ=54.54;MQ0=9;MQRankSum=-9.481;QD=14.50;ReadPosRankSum=2.770;VQSLOD=3.7583;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:71.83:0,72,1445	0/0:13,0:13:35.52:0,36,606	0/1:29,0:8:6.33:6,0,31	0/1:50,0:15:29.32:107,0,29	0/0:32,0:32:75:0,75,1105	1/1:0,15:15:18.06:334,18,0	1/1:2,17:19:15.05:273,15,0	0/0:46,0:45:66.36:0,66,1003	1/1:5,22:27:42.14:731,42,0	0/0:32,0:32:70.46:0,70,1428	0/0:18,0:18:40.28:0,40,698	0/0:26,0:26:40.27:0,40,1293	1/1:3,20:23:35.95:542,36,0	1/1:0,23:23:24.08:444,24,0	1/1:4,26:30:41.97:700,42,0	0/0:23,0:22:66.09:0,66,1414	1/1:2,20:22:18.06:325,18,0	1/1:8,0:7:14.87:105,15,0	0/0:18,0:18:42.31:0,42,562	0/0:21,0:21:2.34:0,2,288	0/0:25,0:24:21.04:0,21,341	1/1:2,21:23:9:164,9,0	1/1:3,26:29:27.09:477,27,0	1/1:20,4:24:11.70:129,12,0	1/1:2,20:22:24.08:428,24,0	1/1:25,0:25:71.73:687,72,0	0/0:18,0:18:29.90:0,30,523	0/1:8,0:7:9.53:29,0,10
chr10	102558984	.	CTG	C	2432.05	PASS	AB=0.974;AC=30;AF=0.536;AN=56;BaseQRankSum=13.984;DP=664;FS=9.505;HRun=0;HaplotypeScore=135.9322;InbreedingCoeff=0.6991;MQ=54.85;MQ0=8;MQRankSum=-9.083;QD=6.33;ReadPosRankSum=3.363;VQSLOD=2.7412;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:32:64.17:0,64,1105	0/0:13,0:13:18.46:0,18,440	0/1:30,0:11:7.15:7,0,45	0/1:49,0:15:29.17:103,0,29	0/0:31,0:31:38.75:0,39,791	1/1:15,0:15:17.91:134,18,0	1/1:18,0:18:14.89:108,15,0	0/0:46,0:45:33.96:0,34,844	1/1:25,1:26:41.67:305,42,0	0/0:31,0:31:70.36:0,70,1057	0/1:15,2:17:0.13:0,0,523	0/0:24,0:24:56.21:0,56,970	1/1:23,0:23:32.75:239,33,0	1/1:23,0:23:23.86:177,24,0	1/1:28,0:29:37.89:275,38,0	0/0:22,0:22:34.54:0,35,952	1/1:20,0:20:17.92:137,18,0	1/1:7,0:6:14.87:105,15,0	0/0:17,1:18:3.22:0,3,357	0/0:21,0:21:2.40:0,2,239	0/0:24,0:23:20.99:0,21,223	1/1:21,0:21:8.67:63,9,0	1/1:28,0:28:24.76:179,25,0	1/1:23,0:23:14.74:117,15,0	1/1:21,0:21:23.90:180,24,0	1/1:25,0:25:69.23:497,69,0	0/0:18,0:18:29.90:0,30,357	0/1:8,0:7:9.56:15,0,10
chr10	102559173	.	GTCTC	G	1219.78	PASS	AB=0.875;AC=17;AF=0.327;AN=52;BaseQRankSum=1.747;DP=767;FS=9.190;HRun=0;HaplotypeScore=155.2714;InbreedingCoeff=0.4772;MQ=56.12;MQ0=36;MQRankSum=2.696;QD=4.39;ReadPosRankSum=0.753;VQSLOD=2.0787;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:11.58:0,12,503	0/0:6,0:6:6.96:0,7,114	./.	./.	0/0:26,0:25:20.49:0,20,214	1/1:17,0:17:3.01:42,3,0	1/1:24,6:31:8.75:118,9,0	0/0:48,0:46:25.28:0,25,286	1/1:14,9:22:12.51:180,13,0	0/1:36,0:35:40.01:40,0,527	0/0:22,0:21:11.78:0,12,158	0/0:19,0:25:12.04:0,12,224	1/1:18,3:26:15.51:179,16,0	0/0:18,1:19:4.46:0,4,17	0/1:25,9:34:43.47:325,0,43	0/0:16,0:18:15.05:0,15,317	0/0:23,0:25:25.61:0,26,338	0/0:28,0:28:21.03:0,21,295	0/0:16,0:14:9:0,9,107	0/0:22,0:22:2.94:0,3,18	0/0:16,0:16:3.48:0,3,71	1/1:26,7:32:6.01:68,6,0	1/1:23,0:22:2.79:45,3,0	0/1:32,7:39:8.80:340,0,9	1/1:10,4:14:3.48:48,3,0	0/0:20,0:26:24.08:0,24,433	0/0:18,0:17:12.04:0,12,218	0/0:12,0:9:3.01:0,3,54
chr10	102561778	.	G	GGAAT	15629.24	PASS	AB=0.667;AC=27;AF=0.482;AN=56;BaseQRankSum=-15.820;DP=742;FS=0.000;HRun=0;HaplotypeScore=101.2155;InbreedingCoeff=0.9316;MQ=67.00;MQ0=0;MQRankSum=0.473;QD=40.60;ReadPosRankSum=3.156;VQSLOD=5.2517;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:74.05:0,74,1154	0/0:10,0:10:27.09:0,27,437	0/0:21,0:20:18.06:0,18,292	0/0:9,0:9:15.02:0,15,209	0/0:33,0:33:75.26:0,75,1224	1/1:8,22:30:51.17:1247,51,0	1/1:4,17:21:39.13:953,39,0	0/0:29,0:29:51.16:0,51,798	1/1:6,16:24:24.08:562,24,0	0/0:30,0:30:75.04:0,75,1179	0/0:31,0:31:72.23:0,72,1140	0/0:36,0:36:13.94:0,14,1282	1/1:9,20:31:63.22:1536,63,0	1/1:10,8:19:18.06:431,18,0	1/1:11,19:31:51.18:1247,51,0	0/0:30,0:29:69.22:0,69,1108	1/1:7,23:32:48.16:1174,48,0	1/1:5,25:30:60.21:1467,60,0	0/0:14,0:14:21.06:0,21,322	0/0:32,0:32:78.25:0,78,1256	0/0:19,0:19:39.13:0,39,641	1/1:7,19:27:48.12:1120,48,0	1/1:12,30:42:66.23:1603,66,0	1/1:10,13:24:48.16:1129,48,0	1/1:9,29:39:72.25:1724,72,0	0/1:11,11:22:7.19:849,0,7	0/0:31,0:31:87.30:0,87,1421	1/1:5,8:13:24.08:587,24,0
chr10	102562958	.	TG	T	3979.11	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=7.356;DP=539;FS=31.075;HRun=1;HaplotypeScore=76.0581;InbreedingCoeff=0.9852;MQ=75.73;MQ0=4;MQRankSum=-7.694;QD=11.88;ReadPosRankSum=-5.464;VQSLOD=-0.6860;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1286	0/0:7,0:7:16.88:0,17,218	0/0:33,0:23:33.08:0,33,441	0/0:31,1:24:23.70:0,24,353	0/0:21,0:21:63.17:0,63,743	1/1:13,1:13:18.58:127,19,0	1/1:16,1:17:16.12:96,16,0	1/1:26,0:26:58.07:390,58,0	1/1:22,0:21:19.10:113,19,0	0/0:26,0:26:77.53:0,78,838	0/0:15,0:15:31.84:0,32,456	0/0:18,0:18:43.56:0,44,571	1/1:12,0:12:16.91:103,17,0	1/1:18,1:19:21.02:115,21,0	1/1:14,3:17:35.90:279,36,0	0/0:13,0:13:39.09:0,39,453	1/1:18,1:18:20.62:138,21,0	1/1:12,2:14:26.83:171,27,0	1/1:20,0:19:43.34:284,43,0	1/1:17,1:17:43.59:321,44,0	1/1:13,2:14:35.88:285,36,0	1/1:19,0:18:39.73:306,40,0	1/1:7,1:8:21.18:159,21,0	1/1:10,1:11:20.67:138,21,0	1/1:25,3:28:35.65:234,36,0	1/1:19,1:20:15.53:366,16,0	1/1:19,0:19:33.25:218,33,0	1/1:14,2:17:16.38:136,16,0
chr10	102563166	.	CAG	C	1258.77	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.531;DP=673;FS=5.570;HRun=0;HaplotypeScore=76.6989;InbreedingCoeff=0.9475;MQ=86.00;MQ0=0;MQRankSum=-1.703;QD=34.02;ReadPosRankSum=2.192;VQSLOD=5.7862;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,2456	0/0:2,0:2:6.02:0,6,110	0/0:20,0:20:51.15:0,51,852	0/0:25,0:25:66.19:0,66,1141	0/0:24,0:24:72.25:0,72,1319	0/0:18,0:17:48.16:0,48,880	0/0:27,0:27:81.26:0,81,1449	0/0:22,0:22:63.22:0,63,1153	0/0:30,0:30:90.31:0,90,1636	0/0:30,0:30:90.31:0,90,1650	0/0:20,0:20:57.20:0,57,1045	0/0:21,0:21:54.16:0,54,951	0/0:33,0:33:90.31:0,90,1625	0/0:20,0:20:57.18:0,57,1014	0/0:27,0:27:75.26:0,75,1362	0/0:22,0:22:66.23:0,66,1210	0/0:25,0:24:75.24:0,75,1344	0/0:20,0:20:57.13:0,57,979	0/0:25,0:25:72.24:0,72,1285	0/0:22,0:22:66.20:0,66,1138	0/0:49,0:49:99:0,138,2472	0/0:19,0:19:54.17:0,54,954	0/0:25,0:25:75.26:0,75,1375	0/0:23,0:23:66.23:0,66,1210	0/0:21,0:21:63.22:0,63,1155	1/1:2,25:27:75.22:1036,75,0	0/0:21,0:21:60.21:0,60,1090	1/1:0,10:10:24.08:344,24,0
chr10	102564235	.	GGTAAT	G	514.43	PASS	AB=0.851;AC=11;AF=0.196;AN=56;BaseQRankSum=4.193;DP=220;FS=8.392;HRun=0;HaplotypeScore=60.5488;InbreedingCoeff=-0.1736;MQ=69.18;MQ0=7;MQRankSum=-3.074;QD=5.30;ReadPosRankSum=-2.558;VQSLOD=-0.1797;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:33.11:0,33,920	0/0:1,0:1:3.01:0,3,95	0/0:24,0:15:43.44:0,43,907	0/0:20,0:8:2.35:0,2,377	0/0:2,0:2:3.01:0,3,95	0/1:7,2:9:87.63:88,0,286	0/0:21,0:21:37.78:0,38,1067	0/0:4,0:3:5.52:0,6,169	0/1:8,1:9:66.02:66,0,490	0/0:5,0:4:12.04:0,12,328	0/0:1,0:1:3.01:0,3,84	0/0:5,0:5:12.04:0,12,336	0/0:3,0:3:9.03:0,9,253	0/1:9,1:10:69.51:70,0,367	0/0:6,0:6:15.05:0,15,418	0/0:4,0:4:8.98:0,9,252	0/1:8,2:10:73.17:73,0,292	0/1:4,2:6:99:133,0,224	1/1:3,0:2:3.48:43,3,0	0/0:0,1:1:0:0,0,0	0/1:16,1:16:79.04:79,0,200	0/0:2,0:2:3:0,3,26	0/0:4,1:5:6.02:0,6,168	0/1:18,1:16:14.26:14,0,618	0/1:7,1:8:40.88:41,0,220	0/0:5,0:5:2.43:0,2,286	0/1:3,3:6:44.67:45,0,102	0/0:1,0:1:3.01:0,3,67
chr10	102564236	.	GTAA	G	62.75	PASS	AB=0.955;AC=13;AF=0.241;AN=54;BaseQRankSum=5.109;DP=213;FS=15.042;HRun=0;HaplotypeScore=54.3838;InbreedingCoeff=-0.0982;MQ=70.10;MQ0=6;MQRankSum=-1.631;QD=0.66;ReadPosRankSum=-2.154;VQSLOD=-0.3377;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:33.11:0,33,626	0/0:1,0:1:3.01:0,3,71	0/0:22,0:15:30.70:0,31,555	0/1:18,0:8:4.38:4,0,212	0/0:2,0:2:3.01:0,3,71	0/1:9,0:9:14:14,0,171	0/0:21,0:21:38.27:0,38,657	0/0:3,0:3:6.01:0,6,112	0/1:9,0:9:16.83:17,0,322	0/0:5,0:4:12.04:0,12,218	0/0:1,0:1:3.01:0,3,52	0/0:5,0:5:12.04:0,12,227	0/0:3,0:3:9.03:0,9,166	0/1:10,0:10:19.32:19,0,204	0/0:6,0:6:15.05:0,15,265	0/0:4,0:4:8.81:0,9,167	0/1:9,1:10:22.19:22,0,166	0/1:6,0:6:42.33:42,0,130	1/1:2,1:2:2.90:16,3,0	./.	0/1:12,2:13:31.68:32,0,100	1/1:1,0:1:2.80:13,3,0	0/0:5,0:5:6.02:0,6,107	0/0:16,3:16:5.60:0,6,375	0/1:8,0:8:3.03:3,0,123	0/0:5,0:5:13.62:0,14,170	0/1:5,1:6:16.93:17,0,77	0/0:1,0:1:3.01:0,3,39
chr10	102564244	.	GATT	G	181.13	PASS	AB=0.797;AC=8;AF=0.143;AN=56;BaseQRankSum=5.777;DP=209;FS=22.476;HRun=0;HaplotypeScore=49.7943;InbreedingCoeff=-0.1859;MQ=72.29;MQ0=2;MQRankSum=-3.462;QD=3.23;ReadPosRankSum=0.404;VQSLOD=-0.6294;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:36.12:0,36,868	0/0:1,0:1:3.01:0,3,60	0/0:25,1:16:21.29:0,21,800	0/0:21,1:10:19.77:0,20,437	0/0:2,0:2:3.01:0,3,74	0/1:5,2:7:60.73:61,0,347	0/0:23,0:23:63.22:0,63,1506	0/0:3,0:3:6.01:0,6,148	0/1:7,1:8:14.66:15,0,483	0/0:4,0:4:12.04:0,12,296	0/0:1,0:1:3.01:0,3,74	0/0:5,0:5:12.04:0,12,292	0/0:4,0:4:12.04:0,12,256	0/1:6,1:7:22.69:23,0,319	0/0:7,0:7:21.07:0,21,517	0/0:4,0:4:8.82:0,9,222	0/1:5,2:7:25.46:25,0,281	0/1:7,2:10:90.37:90,0,378	0/0:4,0:3:9.03:0,9,213	0/0:0,1:1:0:0,0,0	0/0:6,1:6:8.80:0,9,179	0/0:1,0:1:3.01:0,3,65	0/0:4,1:5:9.03:0,9,202	0/0:17,1:18:44.95:0,45,1097	0/1:4,1:5:25.36:25,0,244	0/1:5,1:6:32.77:33,0,349	0/1:2,3:6:38.24:38,0,80	0/0:1,0:1:3.01:0,3,74
chr10	102564503	.	CA	C	2370.53	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=-0.857;DP=512;FS=0.887;HRun=9;HaplotypeScore=71.9325;InbreedingCoeff=0.8340;MQ=72.41;MQ0=4;MQRankSum=0.860;QD=13.47;ReadPosRankSum=-1.318;VQSLOD=3.3952;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.26:0,90,1028	0/0:6,0:6:18.05:0,18,208	0/1:33,0:16:14.60:15,0,82	0/1:20,0:11:2.55:3,0,45	0/0:7,0:7:18.05:0,18,208	0/0:19,0:19:54.14:0,54,603	0/0:27,0:27:66.10:0,66,711	1/1:4,30:34:89.87:772,90,0	0/0:18,0:18:47.99:0,48,517	0/0:23,0:23:60.12:0,60,641	0/0:3,0:3:9:0,9,85	0/0:23,0:23:57.17:0,57,657	0/0:10,0:10:24.07:0,24,272	0/0:26,0:26:66.08:0,66,689	0/0:21,0:20:57.05:0,57,596	0/0:16,0:16:45.04:0,45,483	0/0:19,0:18:54.58:0,55,590	0/0:26,0:26:66.17:0,66,690	1/1:7,11:19:35.04:306,35,0	1/1:2,10:12:29.94:264,30,0	1/1:2,17:19:45.02:412,45,0	0/0:13,0:13:32.66:0,33,338	0/0:11,0:11:27.08:0,27,306	0/0:19,0:19:54.10:0,54,588	0/0:18,0:18:51.15:0,51,575	1/1:0,14:14:42.02:384,42,0	1/1:1,16:16:35.97:329,36,0	1/1:2,5:7:9:82,9,0
chr10	102566452	.	G	GTATA	1513.41	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.471;DP=764;FS=1.721;HRun=0;HaplotypeScore=124.7168;InbreedingCoeff=0.9985;MQ=71.07;MQ0=4;MQRankSum=-0.539;QD=43.24;ReadPosRankSum=0.652;VQSLOD=4.2925;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,26:33:63.22:1608,63,0	0/0:17,0:17:36.12:0,36,617	0/0:37,0:24:28.40:0,28,389	0/0:44,0:31:31.45:0,31,412	0/0:30,0:30:75.24:0,75,1282	0/0:25,0:25:63.22:0,63,1091	0/0:29,0:30:72.19:0,72,1174	0/0:34,0:34:90.25:0,90,1396	0/0:28,0:28:60.18:0,60,996	0/0:25,0:25:60.20:0,60,1021	0/0:16,0:16:42.14:0,42,734	0/0:30,0:30:78.27:0,78,1354	0/0:18,0:18:54.17:0,54,916	0/0:23,0:23:63.22:0,63,1095	0/0:28,0:28:72.22:0,72,1205	0/0:23,0:22:60.18:0,60,995	0/0:45,0:45:99:0,120,2036	0/0:18,0:18:39.13:0,39,683	0/0:19,0:19:42.12:0,42,676	0/0:21,0:21:48:0,48,839	0/0:22,0:22:57.13:0,57,885	0/0:18,0:18:39.13:0,39,670	0/0:30,0:30:81.26:0,81,1389	0/0:24,0:24:60.20:0,60,1031	0/0:44,0:44:99:0,108,1834	0/0:27,0:27:72.24:0,72,1235	0/0:35,0:35:96.28:0,96,1566	0/0:18,0:18:51.10:0,51,778
chr10	102566793	.	A	AAC	14963.22	PASS	AB=0.589;AC=32;AF=0.571;AN=56;BaseQRankSum=-7.919;DP=809;FS=8.211;HRun=0;HaplotypeScore=108.3623;InbreedingCoeff=0.5293;MQ=67.94;MQ0=6;MQRankSum=-0.958;QD=28.23;ReadPosRankSum=1.013;VQSLOD=6.0031;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:53:99:0,102,1315	0/0:12,0:14:41.76:0,42,436	0/0:43,0:30:24.05:0,24,266	0/0:47,0:38:15.33:0,15,456	0/0:24,0:25:66:0,66,747	1/1:5,15:21:17.57:599,18,0	0/1:10,20:30:86.73:663,0,87	1/1:10,21:32:62.77:908,63,0	1/1:11,14:25:6.16:586,6,0	0/0:32,0:32:66.19:0,66,792	0/0:17,0:19:50.93:0,51,563	0/0:23,0:23:60.17:0,60,708	1/1:6,19:25:15.66:726,16,0	1/1:10,26:36:0.27:953,0,0	1/1:3,22:25:26.96:887,27,0	0/0:22,0:22:51.12:0,51,581	1/1:5,28:35:46.96:1075,47,0	1/1:8,25:32:30.24:972,30,0	1/1:10,14:24:51.14:769,51,0	0/1:11,21:32:71.62:846,0,72	1/1:9,25:34:63.21:1008,63,0	1/1:5,16:20:42.06:641,42,0	1/1:9,15:24:12.18:676,12,0	0/1:9,25:33:32.69:980,0,33	1/1:6,20:29:21.21:828,21,0	0/1:10,23:35:24.13:1047,0,24	0/1:2,13:15:2.93:446,0,3	0/1:8,11:19:41.86:354,0,42
chr10	102567958	.	TGA	T	354.16	PASS	AB=0.899;AC=11;AF=0.212;AN=52;BaseQRankSum=0.202;DP=583;FS=7.837;HRun=0;HaplotypeScore=145.0896;InbreedingCoeff=-0.1834;MQ=61.98;MQ0=16;MQRankSum=2.843;QD=1.57;ReadPosRankSum=0.126;VQSLOD=1.8035;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:28:0.67:101,0,1	0/1:3,7:10:11.89:127,0,12	./.	0/0:31,0:17:0:0,0,0	0/1:18,0:24:1.51:2,0,102	0/1:15,0:15:6.98:7,0,25	0/0:23,0:23:21.81:0,22,169	0/0:32,0:32:17.76:0,18,175	0/0:23,0:23:15.27:0,15,167	0/1:23,0:23:15.71:16,0,302	0/0:12,0:11:15.04:0,15,200	0/1:15,8:23:21.08:142,0,21	0/0:23,0:22:26.76:0,27,262	0/0:29,0:28:1.62:0,2,56	0/0:21,0:21:8.99:0,9,92	0/1:11,3:14:16.55:17,0,165	0/1:16,1:17:20.63:21,0,93	0/0:22,0:22:26.57:0,27,239	0/0:14,0:14:11.96:0,12,78	0/0:20,1:21:10.46:0,10,80	0/1:22,1:20:14.78:15,0,115	0/0:14,0:13:2.99:0,3,24	0/0:15,0:15:2.98:0,3,21	0/0:34,0:31:14.97:0,15,142	0/0:16,0:15:3.01:0,3,30	0/1:26,0:26:21.34:21,0,69	0/1:18,1:19:17.47:17,0,101	./.
chr10	102568001	.	CAG	C	705.88	PASS	AB=0.935;AC=13;AF=0.250;AN=52;BaseQRankSum=3.774;DP=629;FS=11.227;HRun=0;HaplotypeScore=212.9125;InbreedingCoeff=-0.0872;MQ=38.82;MQ0=43;MQRankSum=-3.049;QD=2.36;ReadPosRankSum=-0.295;VQSLOD=0.9069;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:45:36.91:0,37,456	0/1:12,0:12:4.77:5,0,91	./.	./.	0/0:28,0:27:20.47:0,20,449	0/1:15,0:12:13.96:14,0,25	0/1:16,0:15:7.38:7,0,56	0/1:26,0:22:30.27:62,0,30	0/1:22,0:21:10.08:10,0,52	0/0:32,0:30:69.04:0,69,1141	0/0:12,0:9:12.04:0,12,196	0/0:31,0:29:38.65:0,39,722	0/0:25,0:22:15.86:0,16,142	0/1:27,0:24:6.72:9,0,7	0/0:14,0:13:2.63:0,3,23	0/0:16,0:15:32.78:0,33,496	0/0:21,0:18:12.47:0,12,85	0/0:23,0:20:6.69:0,7,106	0/1:22,3:23:60.56:271,0,61	0/1:28,8:36:48.13:61,0,48	0/0:23,1:18:2.94:0,3,52	0/1:21,0:19:0:1,0,0	1/1:18,0:16:2.22:7,2,0	0/0:30,0:27:5.87:0,6,53	0/0:16,0:12:3.20:0,3,53	0/1:42,3:39:62.38:62,0,219	0/1:23,9:32:1.27:328,0,1	0/0:6,0:4:4.93:0,5,21
chr10	102568005	.	G	GAC	2281.02	PASS	AB=0.688;AC=19;AF=0.365;AN=52;BaseQRankSum=4.855;DP=628;FS=16.675;HRun=0;HaplotypeScore=217.5307;InbreedingCoeff=0.2446;MQ=37.89;MQ0=43;MQRankSum=-5.900;QD=7.58;ReadPosRankSum=-1.339;VQSLOD=1.8042;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:42:31.27:0,31,588	0/0:10,1:11:18:0,18,253	./.	./.	0/0:27,0:26:33.08:0,33,445	1/1:7,8:12:12:163,12,0	0/1:13,3:13:2.99:153,0,3	0/0:34,0:29:74.21:0,74,580	1/1:9,14:21:26.97:373,27,0	0/0:33,0:31:86.44:0,86,1159	0/0:11,0:8:12.04:0,12,183	0/0:32,0:30:65.56:0,66,931	0/1:8,17:22:59.87:365,0,60	1/1:12,15:24:8.38:128,8,0	1/1:3,10:12:2.58:53,3,0	0/0:16,0:15:36.11:0,36,527	0/1:5,15:18:23.66:210,0,24	0/1:11,11:19:10.61:483,0,11	0/0:25,0:23:62.27:0,62,490	0/0:35,0:35:26.75:0,27,177	0/0:23,0:17:6:0,6,70	0/1:4,18:20:0.15:0,0,0	1/1:7,12:16:2.90:47,3,0	0/1:18,12:27:17.06:17,0,39	0/1:9,10:15:35.33:68,0,35	0/1:33,9:36:99:345,0,344	0/0:32,0:32:31.82:0,32,275	0/1:5,2:5:41.79:42,0,77
chr10	102568009	.	GAC	G	918.22	PASS	AB=0.954;AC=13;AF=0.250;AN=52;BaseQRankSum=2.803;DP=620;FS=10.598;HRun=0;HaplotypeScore=220.2500;InbreedingCoeff=-0.1614;MQ=37.48;MQ0=42;MQRankSum=-2.195;QD=3.19;ReadPosRankSum=-2.647;VQSLOD=1.1438;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:44:52.82:0,53,704	0/0:10,0:10:13.68:0,14,204	./.	./.	0/0:28,0:27:2.75:0,3,580	0/1:16,0:13:16.08:16,0,34	0/0:16,0:13:5.68:0,6,61	0/1:29,3:27:53.07:205,0,53	0/0:22,0:20:4.02:0,4,103	0/0:35,0:33:38.76:0,39,1422	0/0:12,0:9:14.85:0,15,208	0/0:33,0:31:43.38:0,43,993	0/0:23,0:20:7.52:0,8,155	0/1:27,0:25:20.42:35,0,20	0/0:14,0:13:2.65:0,3,28	0/0:17,0:16:34.60:0,35,622	0/0:21,0:18:19.71:0,20,115	0/0:23,0:20:29.02:0,29,228	0/1:15,4:17:39.88:270,0,40	0/1:27,6:33:31.51:121,0,32	0/1:23,1:18:19.01:19,0,52	0/1:23,0:21:0:1,0,0	1/1:21,0:18:2.79:24,3,0	0/0:28,0:25:3.41:0,3,51	0/1:18,0:14:9.03:9,0,73	0/1:36,1:31:88.60:89,0,398	0/1:30,1:31:8.79:259,0,9	0/1:7,0:5:8.57:9,0,45
chr10	102568017	.	CAG	C	549.77	PASS	AB=0.630;AC=16;AF=0.308;AN=52;BaseQRankSum=8.267;DP=634;FS=7.148;HRun=0;HaplotypeScore=219.9841;InbreedingCoeff=0.4832;MQ=37.60;MQ0=42;MQRankSum=-7.838;QD=2.63;ReadPosRankSum=-0.356;VQSLOD=1.8295;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:42:57.56:0,58,899	0/0:10,1:11:18.95:0,19,288	./.	./.	0/0:28,0:28:32.56:0,33,726	1/1:7,8:12:5.87:36,6,0	1/1:11,4:12:2.33:37,2,0	0/0:44,0:37:88.30:0,88,928	0/1:11,10:19:0.12:105,0,0	0/0:34,0:32:72.86:0,73,1372	0/0:14,0:11:18.05:0,18,286	0/0:35,0:33:66.12:0,66,1034	0/1:7,14:18:26.55:133,0,27	1/1:14,12:24:7.04:36,7,0	0/1:3,11:13:0:1,0,0	0/0:18,0:17:36.11:0,36,585	1/1:13,6:17:1.15:96,1,0	1/1:16,5:18:3.46:185,3,0	0/0:30,0:27:48.38:0,48,525	0/0:32,0:31:26.10:0,26,332	0/0:25,0:19:8.96:0,9,119	0/1:6,15:19:0:1,0,0	0/1:10,8:15:0.21:0,0,0	0/0:21,8:26:3.41:0,3,51	0/1:9,9:14:39.03:62,0,39	0/0:35,1:30:9.05:0,9,663	0/0:29,0:29:19.30:0,19,282	0/0:10,0:9:11.68:0,12,326
chr10	102568021	.	G	GAC	358.66	PASS	AB=0.912;AC=14;AF=0.269;AN=52;BaseQRankSum=8.276;DP=634;FS=0.710;HRun=0;HaplotypeScore=230.4394;InbreedingCoeff=0.3436;MQ=37.61;MQ0=42;MQRankSum=-5.577;QD=1.76;ReadPosRankSum=-1.390;VQSLOD=2.2794;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,1:43:60.01:0,60,826	0/0:12,0:12:20.53:0,21,276	./.	./.	0/0:26,0:26:44.89:0,45,654	1/1:17,0:14:3.22:29,3,0	1/1:15,0:12:1.47:14,1,0	0/0:39,0:32:93.22:0,93,1266	0/1:15,4:17:0.08:116,0,0	0/0:32,0:30:84.20:0,84,1246	0/0:13,0:11:18.05:0,18,253	0/0:34,0:32:65.76:0,66,960	0/1:20,1:18:69.93:85,0,70	1/1:23,5:26:5.34:47,5,0	0/0:15,0:14:1:0,1,3	0/0:17,0:16:39.10:0,39,542	1/1:18,1:17:0.33:53,0,0	0/1:21,2:20:46.41:126,0,46	0/0:35,0:29:80.75:0,81,954	0/0:32,0:31:28.66:0,29,259	0/0:25,0:19:9.02:0,9,136	0/0:23,1:22:1.52:0,2,5	0/1:14,2:13:0.11:0,0,0	0/1:26,4:27:3.08:3,0,32	0/1:16,0:14:22.75:23,0,39	0/0:31,0:25:71.40:0,71,840	0/0:29,0:29:41.54:0,42,448	0/0:10,0:9:26.95:0,27,328
chr10	102568033	.	CAG	C	385.30	PASS	AB=0.926;AC=21;AF=0.375;AN=56;BaseQRankSum=7.373;DP=608;FS=2.040;HRun=0;HaplotypeScore=191.7910;InbreedingCoeff=0.2481;MQ=40.52;MQ0=42;MQRankSum=-4.427;QD=1.27;ReadPosRankSum=-4.419;VQSLOD=1.2121;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:40:72.18:0,72,1189	0/0:13,0:13:18.52:0,19,291	0/0:8,0:5:12.04:0,12,177	0/1:11,0:3:2.95:3,0,42	0/0:23,0:23:36.12:0,36,639	1/1:13,2:12:2.04:6,2,0	1/1:12,0:9:0.85:3,1,0	0/1:40,0:34:99:181,0,1057	1/1:16,1:15:7.52:47,8,0	0/0:29,0:27:66.70:0,67,1161	0/0:13,0:11:21.07:0,21,367	0/0:30,0:29:66.01:0,66,1048	0/1:15,3:15:16.88:17,0,72	1/1:22,2:22:9.49:57,9,0	0/1:12,3:14:10.11:30,0,10	0/0:18,0:17:42.14:0,42,739	0/1:11,2:10:0.96:1,0,33	0/1:16,2:16:9.15:9,0,56	0/1:37,0:29:17.44:17,0,683	0/0:33,0:32:27.22:0,27,469	0/0:25,0:19:11.97:0,12,206	1/1:19,2:20:2.04:7,2,0	1/1:18,1:16:5.77:46,6,0	0/1:27,2:26:0.91:112,0,1	0/1:14,1:13:6.38:6,0,32	0/0:29,1:25:33.32:0,33,957	0/0:27,0:26:37.65:0,38,545	0/0:10,0:9:3.04:0,3,349
chr10	102568037	.	G	GAC	868.71	PASS	AB=0.954;AC=17;AF=0.304;AN=56;BaseQRankSum=7.102;DP=622;FS=0.628;HRun=0;HaplotypeScore=193.2529;InbreedingCoeff=0.4006;MQ=41.39;MQ0=37;MQRankSum=-1.544;QD=3.95;ReadPosRankSum=-1.622;VQSLOD=2.7291;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:44:74.82:0,75,1102	0/0:12,0:12:20.81:0,21,266	0/0:16,0:9:20.47:0,20,270	0/0:12,0:4:6.73:0,7,74	0/0:21,0:21:36.12:0,36,551	0/1:13,2:12:2.91:29,0,3	1/1:11,1:10:4.16:26,4,0	0/0:39,0:35:99:0,99,1310	0/1:15,0:13:0.85:130,0,1	0/0:30,0:28:72.20:0,72,1058	0/0:11,0:10:21.07:0,21,321	0/0:30,0:29:66:0,66,927	0/1:18,0:15:73.56:90,0,74	1/1:24,0:22:7.54:73,8,0	1/1:15,0:14:8.50:103,8,0	0/0:19,0:18:42.14:0,42,641	0/1:13,0:10:10.19:42,0,10	0/1:19,2:18:10.86:167,0,11	0/0:36,0:29:80.50:0,80,915	0/0:36,0:35:33.52:0,34,477	0/0:24,0:19:12.03:0,12,183	0/1:22,0:21:3.06:31,0,3	1/1:17,2:16:5.91:108,6,0	1/1:28,3:28:0.99:176,1,0	0/1:13,2:14:39.28:60,0,39	0/0:30,0:25:64.32:0,64,976	0/0:27,0:26:45.10:0,45,618	0/0:10,0:10:26.68:0,27,366
chr10	102568039	.	GAC	G	651.91	PASS	AB=0.980;AC=21;AF=0.375;AN=56;BaseQRankSum=5.609;DP=621;FS=9.697;HRun=0;HaplotypeScore=187.5233;InbreedingCoeff=0.2228;MQ=43.25;MQ0=36;MQRankSum=-3.360;QD=2.10;ReadPosRankSum=-3.475;VQSLOD=1.2129;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:43:78.23:0,78,1380	0/0:10,0:10:13.43:0,13,286	0/0:16,0:10:26.76:0,27,358	0/1:13,0:5:14.38:14,0,81	0/0:20,0:20:35.99:0,36,693	1/1:16,0:13:4.31:29,4,0	1/1:12,0:10:8.13:52,8,0	0/1:32,7:35:99:237,0,1204	0/1:16,0:14:0.73:51,0,1	0/0:27,0:25:52.39:0,52,1220	0/0:11,0:10:21.07:0,21,405	0/0:30,0:29:63.20:0,63,1147	0/1:18,0:15:31.52:32,0,91	1/1:23,0:21:3.25:13,3,0	0/1:15,0:14:10.17:13,0,10	0/0:19,0:18:45.14:0,45,833	0/1:13,0:10:33.16:56,0,33	0/1:21,0:18:38.12:82,0,38	0/1:37,1:30:99:117,0,750	0/0:34,1:34:21.90:0,22,575	0/0:24,0:19:11.97:0,12,231	1/1:22,0:21:0.83:14,1,0	1/1:20,0:17:7.29:31,7,0	1/1:31,0:29:6.77:40,7,0	0/1:14,0:13:42.76:43,0,45	0/0:32,0:27:71.23:0,71,1183	0/0:28,0:27:48.04:0,48,726	0/0:10,0:10:21.98:0,22,426
chr10	102568041	.	CAG	C	1418.42	PASS	AB=0.910;AC=21;AF=0.375;AN=56;BaseQRankSum=5.988;DP=618;FS=6.889;HRun=0;HaplotypeScore=180.9340;InbreedingCoeff=0.5533;MQ=44.21;MQ0=33;MQRankSum=-4.028;QD=5.50;ReadPosRankSum=-2.976;VQSLOD=1.9234;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:43:75.26:0,75,1304	0/0:10,0:10:14.09:0,14,259	0/0:18,0:11:33.07:0,33,490	0/0:14,0:6:10.46:0,10,164	0/0:19,0:19:36.12:0,36,633	1/1:14,2:13:9:102,9,0	1/1:12,0:10:8.32:118,8,0	0/1:40,0:37:68.24:68,0,1213	1/1:12,1:11:14.84:162,15,0	0/0:27,0:25:63.69:0,64,1118	0/0:11,0:10:21.07:0,21,368	0/0:29,0:28:66.23:0,66,1150	0/1:15,3:15:64.45:103,0,64	1/1:20,3:21:7.24:57,7,0	1/1:13,3:15:7.49:85,7,0	0/0:19,0:18:45.15:0,45,790	0/1:12,1:10:21.54:128,0,22	0/1:16,4:18:1.28:255,0,1	0/0:37,0:29:4.01:0,4,729	0/0:33,0:32:35.20:0,35,609	0/0:22,0:18:14.97:0,15,238	1/1:20,2:21:5.97:61,6,0	1/1:19,1:17:11.81:127,12,0	1/1:26,5:29:23.10:224,23,0	0/1:13,1:13:37.92:123,0,38	0/0:32,0:28:75.17:0,75,1211	0/0:32,0:31:60.11:0,60,861	0/0:10,0:10:22.64:0,23,432
chr10	102568464	.	T	TTTG	4397.55	PASS	AB=0.600;AC=13;AF=0.232;AN=56;BaseQRankSum=-1.014;DP=383;FS=1.586;HRun=0;HaplotypeScore=77.0851;InbreedingCoeff=0.7943;MQ=92.14;MQ0=0;MQRankSum=-9.101;QD=46.29;ReadPosRankSum=-3.100;VQSLOD=5.7612;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,1463	0/0:3,0:3:6.02:0,6,93	0/0:24,0:23:42.11:0,42,603	0/0:25,0:23:35.52:0,36,522	0/0:9,0:9:24.08:0,24,370	0/0:6,0:6:15.04:0,15,212	0/0:20,0:20:51.17:0,51,789	1/1:9,9:18:39.13:776,39,0	0/0:14,0:14:30.10:0,30,461	0/0:13,0:13:27.09:0,27,418	0/0:5,0:5:5.99:0,6,67	0/0:11,0:11:24.07:0,24,338	0/0:9,0:9:24.07:0,24,350	0/0:6,0:6:15.05:0,15,232	0/0:5,0:5:12.03:0,12,162	0/0:10,0:10:24.06:0,24,329	0/0:27,0:27:81.26:0,81,1226	0/0:16,0:16:39.13:0,39,603	1/1:3,12:15:39.12:772,39,0	1/1:4,11:15:45.14:854,45,0	1/1:6,15:21:48.12:842,48,0	0/0:8,0:8:18.06:0,18,279	0/0:8,0:8:18.06:0,18,279	0/0:29,0:29:72.22:0,72,1073	0/0:3,0:3:5.93:0,6,40	0/1:3,6:9:22.34:409,0,22	1/1:7,8:15:38.94:679,39,0	1/1:1,1:2:3.01:64,3,0
chr10	102568486	.	AGG	A	1306.38	PASS	AB=0.825;AC=10;AF=0.179;AN=56;BaseQRankSum=5.190;DP=388;FS=18.299;HRun=11;HaplotypeScore=72.2085;InbreedingCoeff=0.7312;MQ=75.34;MQ0=0;MQRankSum=-5.090;QD=13.20;ReadPosRankSum=2.997;VQSLOD=0.5773;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:31:40.88:0,41,513	0/0:4,0:4:6.49:0,6,92	0/0:15,0:13:10.11:0,10,161	0/1:18,0:17:4.03:4,0,164	0/0:10,0:11:26.58:0,27,377	0/0:3,0:13:10.26:0,10,89	0/0:12,0:21:20.98:0,21,180	1/1:8,9:17:22.34:252,22,0	0/0:10,0:11:12.03:0,12,156	0/0:16,0:17:30.08:0,30,404	0/0:5,0:6:16.91:0,17,187	0/0:8,0:8:19.94:0,20,223	0/0:8,0:14:18.03:0,18,199	0/0:4,0:9:15.51:0,16,191	0/0:2,0:10:21.03:0,21,214	0/0:5,0:5:12.04:0,12,184	0/0:6,1:27:20.99:0,21,139	0/0:4,1:19:8.77:0,9,134	0/1:8,5:14:0.57:162,0,1	1/1:1,14:15:39.08:413,39,0	1/1:12,10:23:30.01:319,30,0	0/0:8,0:12:15.04:0,15,196	0/0:5,0:8:12.02:0,12,129	0/0:25,0:26:51.10:0,51,696	0/0:0,0:4:3:0,3,29	0/0:5,0:12:27.06:0,27,317	1/1:2,9:11:30.07:319,30,0	0/0:6,0:6:12.04:0,12,158
chr10	102568496	.	GGT	G	303.32	PASS	AB=0.971;AC=8;AF=0.143;AN=56;BaseQRankSum=8.410;DP=347;FS=18.061;HRun=0;HaplotypeScore=62.6503;InbreedingCoeff=0.3142;MQ=74.20;MQ0=0;MQRankSum=-5.630;QD=3.45;ReadPosRankSum=3.842;VQSLOD=0.2484;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:50.87:0,51,628	0/0:3,0:3:9.01:0,9,124	0/1:11,0:9:0.92:1,0,167	0/0:15,0:13:7.88:0,8,261	0/0:14,0:14:38.96:0,39,514	0/0:10,0:10:9.02:0,9,99	0/0:15,0:15:17.94:0,18,179	0/1:17,0:17:20.54:21,0,123	0/0:6,0:6:18.03:0,18,224	0/0:13,0:13:36.06:0,36,514	0/0:8,0:8:23.91:0,24,281	0/0:8,0:8:18.05:0,18,249	0/0:10,0:10:21.05:0,21,264	0/0:10,0:10:21.05:0,21,280	0/0:13,0:13:30.07:0,30,353	0/0:6,0:6:17.99:0,18,245	0/0:27,0:27:59.25:0,59,384	0/0:19,0:19:44.18:0,44,322	0/1:11,0:11:40.27:40,0,84	1/1:15,0:15:8.14:136,8,0	0/1:20,3:23:70.04:117,0,70	0/0:10,0:10:4.07:0,4,232	0/0:5,0:5:12.04:0,12,157	0/0:22,0:22:63.01:0,63,852	0/0:6,0:6:9:0,9,84	0/0:12,0:12:36.04:0,36,428	1/1:10,1:11:6.70:117,7,0	0/0:6,0:6:15.03:0,15,207
chr10	102573481	.	G	GT	21201.81	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-15.790;DP=702;FS=0.629;HRun=0;HaplotypeScore=61.8127;InbreedingCoeff=0.9966;MQ=74.99;MQ0=0;MQRankSum=-4.065;QD=42.83;ReadPosRankSum=3.696;VQSLOD=5.3382;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:57:99:0,175,2413	0/0:9,0:9:27.06:0,27,357	0/0:27,0:27:71.41:0,71,937	0/0:25,0:24:66.21:0,66,889	0/0:20,0:20:57.19:0,57,796	1/1:0,14:14:36.12:575,36,0	1/1:1,42:43:99:1870,117,0	1/1:0,29:28:81.26:1264,81,0	1/1:0,36:36:93.32:1485,93,0	0/0:21,0:21:63.21:0,63,867	0/0:11,0:11:33.11:0,33,461	0/0:25,0:25:75.24:0,75,1026	1/1:1,25:26:72.22:1125,72,0	1/1:0,17:17:45.15:719,45,0	1/1:0,16:16:42.14:671,42,0	0/0:11,0:11:33.11:0,33,460	1/1:0,48:48:99:2253,141,0	1/1:1,26:27:52.22:1083,52,0	1/1:0,20:19:57.19:903,57,0	1/1:1,19:20:48.16:767,48,0	1/1:0,47:47:99:2105,132,0	1/1:0,27:27:81.28:1294,81,0	1/1:0,10:10:21:334,21,0	1/1:0,29:29:75.26:1199,75,0	1/1:0,18:18:48.16:767,48,0	1/1:1,27:28:42.50:1203,43,0	1/1:1,32:33:84.29:1343,84,0	1/1:0,7:7:15.05:240,15,0
chr10	102573774	.	A	ACG	3442.06	PASS	AB=0.738;AC=32;AF=0.615;AN=52;BaseQRankSum=3.241;DP=525;FS=3.379;HRun=0;HaplotypeScore=85.5758;InbreedingCoeff=0.7719;MQ=65.74;MQ0=35;MQRankSum=-3.845;QD=10.62;ReadPosRankSum=-1.529;VQSLOD=3.0550;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:69.19:0,69,863	0/0:6,0:6:6.02:0,6,78	0/0:38,0:26:40.91:0,41,562	0/0:36,0:24:47.62:0,48,532	0/0:16,0:16:39.10:0,39,477	1/1:13,5:13:14.71:199,15,0	1/1:7,24:31:15.04:219,15,0	1/1:9,11:20:30.10:459,30,0	1/1:12,4:9:12.04:196,12,0	0/0:20,0:20:33.10:0,33,419	0/0:12,0:12:23.94:0,24,288	0/0:18,0:18:36.12:0,36,468	1/1:17,8:20:14.63:183,15,0	1/1:9,1:7:6.02:91,6,0	0/1:15,3:15:0.10:0,0,0	0/0:14,0:14:21.07:0,21,273	1/1:7,12:14:9.03:146,9,0	1/1:17,2:13:24:317,24,0	1/1:4,8:12:30.08:437,30,0	./.	1/1:9,18:22:2.76:37,3,0	1/1:17,2:15:12.51:181,13,0	1/1:15,1:13:12.33:133,12,0	0/1:10,16:21:3.91:163,0,4	1/1:13,3:13:3.01:51,3,0	1/1:10,11:20:39.08:584,39,0	1/1:6,4:8:3.01:45,3,0	./.
chr10	102573783	.	CAT	C	2642.97	PASS	AB=0.836;AC=32;AF=0.615;AN=52;BaseQRankSum=6.974;DP=488;FS=8.177;HRun=0;HaplotypeScore=74.8752;InbreedingCoeff=0.5837;MQ=56.81;MQ0=43;MQRankSum=-4.247;QD=8.50;ReadPosRankSum=0.270;VQSLOD=2.0883;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:69.12:0,69,1032	0/0:3,0:3:9.03:0,9,158	0/0:43,0:20:47.20:0,47,710	0/0:35,0:17:47.97:0,48,595	0/0:15,0:15:36.11:0,36,615	1/1:9,8:13:15.02:184,15,0	1/1:31,0:30:14.85:214,15,0	1/1:12,0:11:8.17:328,8,0	1/1:9,9:11:12.03:136,12,0	0/0:17,0:17:44.22:0,44,773	0/1:11,0:11:8.61:9,0,371	0/0:14,2:16:39.13:0,39,710	1/1:10,2:15:15.05:199,15,0	1/1:5,5:8:9.01:95,9,0	0/1:4,2:15:0.14:0,0,0	0/0:13,0:13:11.08:0,11,487	0/1:20,1:15:47.01:48,0,47	1/1:9,9:12:1.07:254,1,0	1/1:8,1:9:10.11:280,10,0	./.	1/1:24,1:19:3.01:42,3,0	1/1:4,12:11:12.04:161,12,0	1/1:3,11:11:9.03:120,9,0	0/1:19,5:19:25.99:148,0,26	1/1:4,2:13:5.84:44,6,0	1/1:14,4:17:44.31:517,44,0	1/1:7,3:8:5.23:51,5,0	./.
chr10	102573791	.	CATACATACAT	C	1071.51	PASS	AB=1.000;AC=23;AF=0.442;AN=52;BaseQRankSum=5.429;DP=471;FS=6.636;HRun=0;HaplotypeScore=113.4070;InbreedingCoeff=0.3703;MQ=46.38;MQ0=51;MQRankSum=-4.478;QD=4.19;ReadPosRankSum=1.290;VQSLOD=1.4422;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:45.95:0,46,1089	0/0:4,0:4:12.04:0,12,330	0/0:36,0:13:34.22:0,34,620	0/0:31,0:13:18.94:0,19,459	0/0:12,0:12:30.10:0,30,750	0/1:18,0:13:8.46:8,0,66	1/1:31,0:30:10.74:52,11,0	1/1:8,0:6:18:219,18,0	0/1:19,0:12:7.20:7,0,12	0/0:15,0:14:35.32:0,35,1194	0/0:11,0:11:18.06:0,18,390	0/0:18,0:18:39.12:0,39,1054	0/0:23,0:17:5.33:0,5,181	0/1:12,0:8:9.66:10,0,26	0/0:21,0:18:1.54:0,2,80	0/0:13,0:13:36.10:0,36,1175	0/1:22,0:16:6.43:6,0,307	0/1:19,0:12:28.96:29,0,233	1/1:8,0:7:15.88:236,16,0	./.	1/1:21,0:15:3.01:69,3,0	1/1:15,0:10:7.84:50,8,0	0/1:14,0:11:8.01:8,0,78	0/1:24,0:18:5.42:5,0,81	1/1:18,0:14:0.01:1,0,0	1/1:14,1:14:29.59:399,30,0	1/1:7,5:10:6.02:144,6,0	./.
chr10	102573795	.	CAT	C	840.45	PASS	AB=0.965;AC=26;AF=0.500;AN=52;BaseQRankSum=8.528;DP=476;FS=8.920;HRun=0;HaplotypeScore=78.5365;InbreedingCoeff=0.2892;MQ=41.52;MQ0=50;MQRankSum=-2.380;QD=2.66;ReadPosRankSum=1.588;VQSLOD=0.9847;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:36.33:0,36,662	0/0:5,0:5:15.05:0,15,244	0/0:33,0:10:24.52:0,25,418	0/0:28,0:10:25.67:0,26,285	0/0:13,0:13:30.07:0,30,507	1/1:21,0:16:7.72:34,8,0	1/1:31,1:31:9.86:57,10,0	0/1:10,0:8:20.91:62,0,21	1/1:19,1:12:2.94:12,3,0	0/0:15,0:14:37.90:0,38,718	0/0:9,0:9:12.13:0,12,270	0/0:17,0:17:36.11:0,36,656	0/1:22,0:17:17.53:18,0,49	1/1:11,0:7:2.65:40,3,0	0/1:21,1:19:10.63:11,0,24	0/0:11,0:11:21.88:0,22,429	0/1:22,3:18:12.32:177,0,12	0/1:19,2:14:8.07:191,0,8	0/1:13,0:12:38.59:61,0,39	./.	1/1:22,0:17:2.99:24,3,0	1/1:15,0:10:11.76:74,12,0	0/1:11,0:9:2.93:10,0,3	1/1:26,0:20:10.87:53,11,0	1/1:17,0:13:5.91:41,6,0	0/1:16,0:15:21.21:103,0,21	1/1:11,0:9:5.96:49,6,0	./.
chr10	102573799	.	CAT	C	1198.82	PASS	AB=0.959;AC=30;AF=0.577;AN=52;BaseQRankSum=7.479;DP=474;FS=7.144;HRun=0;HaplotypeScore=73.9660;InbreedingCoeff=0.6153;MQ=39.16;MQ0=51;MQRankSum=-2.794;QD=3.77;ReadPosRankSum=0.128;VQSLOD=1.2295;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:20.20:0,20,256	0/0:5,0:5:14.95:0,15,130	0/0:32,0:9:12.30:0,12,150	0/0:25,0:8:10.75:0,11,89	0/0:11,0:11:23.96:0,24,225	1/1:21,0:16:8.66:48,9,0	1/1:31,1:31:15.85:110,16,0	1/1:10,0:8:11.59:73,12,0	1/1:18,1:11:5.69:30,6,0	0/0:17,0:16:41.57:0,42,402	0/0:10,0:10:2.76:0,3,92	0/0:17,0:17:35.97:0,36,350	0/1:25,1:20:1.57:105,0,2	1/1:13,0:9:8.99:76,9,0	0/1:20,1:18:10.77:11,0,19	0/0:11,0:11:10.76:0,11,317	1/1:27,0:20:18.66:199,19,0	0/1:20,0:13:1.32:205,0,1	1/1:13,0:12:9.30:61,9,0	./.	1/1:25,0:19:2.86:24,3,0	1/1:13,1:9:8.97:71,9,0	0/1:10,1:9:2.48:18,0,2	1/1:24,2:20:12.92:104,13,0	1/1:14,2:12:5.99:50,6,0	1/1:14,0:13:25.23:154,25,0	1/1:10,0:8:5.97:47,6,0	./.
chr10	102576379	.	T	TGC	2963.04	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=3.210;DP=425;FS=13.704;HRun=0;HaplotypeScore=89.0977;InbreedingCoeff=0.7856;MQ=56.50;MQ0=7;MQRankSum=-1.900;QD=9.78;ReadPosRankSum=1.180;VQSLOD=2.5706;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:99:125,0,179	0/0:5,0:4:5.93:0,6,59	0/0:18,0:12:35.63:0,36,326	0/0:14,0:9:18.68:0,19,155	0/0:21,0:20:48.04:0,48,530	1/1:19,0:19:14.49:99,14,0	1/1:19,0:19:36.92:262,37,0	1/1:18,0:18:32.87:269,33,0	1/1:9,0:9:9.25:90,9,0	0/0:23,0:23:62.91:0,63,691	0/0:11,0:10:18.64:0,19,220	0/0:19,0:19:47.94:0,48,504	1/1:15,0:15:29.76:240,30,0	1/1:16,0:16:19.93:140,20,0	1/1:15,0:15:17.73:137,18,0	0/0:9,0:9:24.02:0,24,266	1/1:15,0:15:2.94:18,3,0	1/1:11,0:11:17.48:196,17,0	1/1:10,0:10:13.78:58,14,0	1/1:11,0:10:21.94:161,22,0	1/1:16,0:15:15.03:123,15,0	1/1:12,0:12:16.36:115,16,0	1/1:14,0:13:20.45:132,20,0	1/1:17,0:17:2.74:12,3,0	1/1:16,0:15:32.62:263,33,0	1/1:7,21:27:3.76:530,4,0	1/1:10,0:10:19.58:102,20,0	1/1:9,0:9:8.02:92,8,0
chr10	102576382	.	G	GCGCTCTCTCTCTCT	4555.79	PASS	AB=0.966;AC=35;AF=0.625;AN=56;BaseQRankSum=-0.215;DP=436;FS=8.815;HRun=0;HaplotypeScore=166.8988;InbreedingCoeff=0.5357;MQ=55.21;MQ0=7;MQRankSum=-2.112;QD=14.51;ReadPosRankSum=2.087;VQSLOD=3.4212;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:26:8.70:9,0,333	0/0:4,0:3:5.93:0,6,114	0/0:18,0:12:19.55:0,20,300	0/0:15,0:8:19.10:0,19,156	0/0:21,0:20:47.67:0,48,760	1/1:17,0:17:15:144,15,0	1/1:19,0:19:35.01:464,35,0	1/1:14,0:14:27.13:281,27,0	1/1:12,0:12:6.85:154,7,0	0/0:24,0:24:59.34:0,59,924	0/0:10,0:9:4.07:0,4,300	0/0:20,0:20:29.99:0,30,655	1/1:15,0:15:29.97:315,30,0	1/1:15,0:15:25.03:372,25,0	1/1:14,0:14:20.64:210,21,0	0/0:10,0:10:22.39:0,22,441	1/1:3,0:20:9.03:256,9,0	1/1:12,0:12:33.34:521,33,0	0/1:6,0:9:33.67:34,0,101	0/1:8,0:10:54.07:195,0,54	1/1:14,0:13:20.70:146,21,0	1/1:14,0:14:16.68:240,17,0	1/1:14,0:13:23.45:156,23,0	1/1:4,12:20:2.38:111,2,0	1/1:20,0:19:32.47:364,32,0	0/1:27,0:27:99:327,0,166	1/1:10,0:10:20.31:195,20,0	0/1:10,0:10:63.19:63,0,95
chr10	102576459	.	CTCT	C	3460.68	PASS	AB=0.925;AC=29;AF=0.518;AN=56;BaseQRankSum=3.540;DP=332;FS=21.629;HRun=0;HaplotypeScore=100.2449;InbreedingCoeff=0.5643;MQ=55.13;MQ0=4;MQRankSum=-4.342;QD=18.61;ReadPosRankSum=0.189;VQSLOD=1.7642;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:21:51.04:0,51,732	0/0:6,0:6:12.04:0,12,194	0/0:25,0:14:28.13:0,28,395	0/0:19,0:8:14.87:0,15,165	0/0:13,0:13:30.03:0,30,527	1/1:9,8:17:40.09:459,40,0	1/1:7,4:11:26.01:326,26,0	0/0:5,0:5:5.91:0,6,38	1/1:5,5:10:11.89:159,12,0	0/0:17,0:16:45.02:0,45,819	0/0:9,0:9:21:0,21,340	0/0:15,0:15:32.63:0,33,467	1/1:5,11:15:36.45:366,36,0	1/1:7,6:13:23.14:279,23,0	1/1:6,8:13:34.95:347,35,0	0/0:8,0:8:18.05:0,18,295	1/1:3,7:10:24.01:308,24,0	0/1:2,3:5:19.33:124,0,19	0/1:10,0:9:6.66:7,0,70	1/1:6,0:6:1.80:24,2,0	0/1:13,0:13:34.81:35,0,36	1/1:5,9:14:35.05:462,35,0	1/1:3,5:8:9.31:180,9,0	1/1:2,2:4:5.99:75,6,0	1/1:6,6:12:26.47:268,26,0	0/1:15,0:14:20.34:20,0,126	0/1:8,0:8:22.39:22,0,48	0/0:4,0:4:5.93:0,6,40
chr10	102576474	.	CACCA	C	3135.35	PASS	AB=0.983;AC=35;AF=0.625;AN=56;BaseQRankSum=2.908;DP=265;FS=6.972;HRun=0;HaplotypeScore=90.2346;InbreedingCoeff=0.1420;MQ=52.50;MQ0=2;MQRankSum=-4.782;QD=13.51;ReadPosRankSum=-0.774;VQSLOD=2.1439;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:18:69.91:70,0,97	0/1:6,0:6:14.88:27,0,15	0/1:16,0:10:1.89:2,0,315	0/0:7,0:2:6.01:0,6,73	0/0:13,0:13:17.62:0,18,125	1/1:13,0:13:39.04:430,39,0	1/1:7,0:7:15.04:212,15,0	0/0:4,0:4:5.80:0,6,40	1/1:9,0:9:20.72:215,21,0	0/1:16,0:15:16.94:17,0,184	0/1:8,0:8:26.43:26,0,51	0/1:14,0:14:1.05:1,0,47	1/1:12,1:12:29.90:309,30,0	1/1:11,1:12:32.97:413,33,0	1/1:10,0:9:20.67:238,21,0	0/0:4,0:4:8.99:0,9,75	1/1:7,0:7:18:208,18,0	0/1:5,0:5:30.95:90,0,31	0/1:10,0:9:82.35:142,0,82	1/1:5,1:6:3.01:45,3,0	0/1:8,0:8:32.27:39,0,32	1/1:10,1:11:19.01:307,19,0	1/1:8,0:8:17.33:175,17,0	1/1:4,0:4:9:112,9,0	1/1:7,0:7:17.85:164,18,0	0/1:10,2:12:53.17:53,0,159	0/1:8,0:8:17.91:18,0,59	0/0:3,0:3:5.84:0,6,35
chr10	102576475	.	AC	A	3812.87	PASS	AB=0.944;AC=54;AF=0.964;AN=56;BaseQRankSum=-1.613;DP=260;FS=1.761;HRun=2;HaplotypeScore=78.4978;InbreedingCoeff=-0.0121;MQ=52.37;MQ0=2;MQRankSum=-2.635;QD=14.66;ReadPosRankSum=1.359;VQSLOD=3.4026;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:18:47.70:357,48,0	1/1:6,0:6:8.58:44,9,0	0/1:15,0:9:28.81:29,0,168	0/1:6,1:2:13.98:14,0,29	1/1:13,0:13:17.59:118,18,0	1/1:12,1:13:35.90:301,36,0	1/1:4,2:6:14.99:141,15,0	1/1:5,0:4:5.82:36,6,0	1/1:9,1:10:17.19:139,17,0	1/1:16,0:15:34.55:194,35,0	1/1:8,0:8:17.66:120,18,0	1/1:14,0:14:20.95:166,21,0	1/1:12,1:12:29.13:222,29,0	1/1:10,2:12:30.45:280,30,0	1/1:9,1:9:20.98:190,21,0	1/1:3,0:3:5.98:45,6,0	1/1:6,1:7:17.97:162,18,0	1/1:5,0:5:13.69:96,14,0	1/1:10,0:9:26.70:181,27,0	1/1:6,0:6:2.49:9,2,0	1/1:7,0:7:14.75:96,15,0	1/1:10,1:11:26.32:201,26,0	1/1:8,0:8:15.44:139,15,0	1/1:4,0:4:5.99:59,6,0	1/1:6,1:7:16.76:142,17,0	1/1:12,0:11:5.28:170,5,0	1/1:7,0:7:14.86:116,15,0	1/1:3,0:3:5.98:46,6,0
chr10	102576476	.	C	CTT	3158.95	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=4.179;DP=256;FS=19.056;HRun=0;HaplotypeScore=83.8284;InbreedingCoeff=0.5437;MQ=52.50;MQ0=2;MQRankSum=-5.135;QD=18.47;ReadPosRankSum=2.584;VQSLOD=2.4321;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:18:22.15:22,0,54	0/0:6,0:6:7.44:0,7,30	0/1:14,0:9:28.93:29,0,160	0/0:8,0:2:6.01:0,6,65	0/0:12,0:12:5.50:0,5,76	1/1:4,9:13:36.70:492,37,0	1/1:4,2:6:15.18:141,15,0	0/0:5,0:4:5.84:0,6,41	1/1:4,6:10:20.49:232,20,0	0/0:15,0:14:29.29:0,29,252	0/1:8,0:8:5.07:5,0,35	0/1:14,0:14:0.68:20,0,1	1/1:3,10:12:28.49:314,28,0	1/1:6,6:12:31.53:382,32,0	1/1:3,7:9:22.01:240,22,0	0/0:3,0:3:5.92:0,6,43	1/1:1,6:7:19.88:276,20,0	1/1:2,3:5:15.05:244,15,0	0/0:10,0:9:1.23:0,1,127	1/1:6,0:6:0.88:17,1,0	0/0:7,0:7:1.34:0,1,15	1/1:3,8:11:32.82:352,33,0	1/1:0,8:8:17.92:232,18,0	1/1:0,3:3:8.98:88,9,0	1/1:1,6:7:18.51:250,19,0	0/0:12,0:11:29.76:0,30,219	0/0:7,0:7:9.95:0,10,76	1/1:3,0:3:3.11:8,3,0
chr10	102576477	.	CA	C	6752.13	PASS	AB=0.856;AC=54;AF=0.964;AN=56;BaseQRankSum=-2.537;DP=254;FS=0.000;HRun=1;HaplotypeScore=67.2673;InbreedingCoeff=-0.0635;MQ=52.54;MQ0=2;MQRankSum=-2.316;QD=26.58;ReadPosRankSum=0.596;VQSLOD=4.5431;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:18:48.16:668,48,0	1/1:0,6:6:9.03:123,9,0	0/1:10,3:9:56.25:56,0,164	0/1:7,1:2:29:36,0,29	1/1:0,12:12:18.06:249,18,0	1/1:10,3:13:39.07:495,39,0	1/1:4,2:6:15.05:198,15,0	1/1:1,4:4:6.02:84,6,0	1/1:7,3:10:19.68:218,20,0	1/1:0,15:14:36.12:503,36,0	1/1:0,8:8:18.53:252,19,0	1/1:0,14:14:22.89:297,23,0	1/1:13,0:12:29.31:370,29,0	1/1:11,1:12:30.56:379,31,0	1/1:8,2:9:21.07:284,21,0	1/1:0,3:3:6.02:83,6,0	1/1:7,0:7:18.06:239,18,0	1/1:3,2:5:14.97:160,15,0	1/1:1,9:9:27.09:370,27,0	1/1:1,4:5:3:26,3,0	1/1:0,7:7:15.05:209,15,0	1/1:10,1:11:28.56:279,29,0	1/1:8,0:8:15.51:183,16,0	1/1:3,0:3:8.99:99,9,0	1/1:7,0:7:16.83:200,17,0	1/1:3,8:11:30.09:403,30,0	1/1:0,7:7:15.05:208,15,0	1/1:0,3:3:6.02:84,6,0
chr10	102576712	.	G	GTCTC	303.16	PASS	AB=0.978;AC=10;AF=0.217;AN=46;BaseQRankSum=5.428;DP=469;FS=1.831;HRun=0;HaplotypeScore=147.0013;InbreedingCoeff=-0.0186;MQ=32.14;MQ0=18;MQRankSum=-6.036;QD=1.67;ReadPosRankSum=-3.001;VQSLOD=1.7572;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:18:20.89:0,21,305	0/0:9,0:8:4.11:0,4,286	./.	./.	0/0:22,0:19:20.63:0,21,354	0/0:16,0:15:4.16:0,4,43	0/0:25,0:20:1.57:0,2,4	0/1:26,0:24:99:146,0,172	0/0:7,0:7:3.01:0,3,40	0/0:32,0:29:69.93:0,70,1132	0/0:22,0:18:26.84:0,27,455	0/0:21,0:20:44.64:0,45,739	0/1:17,0:16:22.29:22,0,160	0/0:10,0:9:0.82:0,1,95	0/1:16,0:15:7.25:10,0,7	0/0:8,0:8:15.04:0,15,275	0/0:7,0:7:6.29:0,6,101	0/1:9,0:9:3.98:4,0,147	0/1:10,1:9:82.22:82,0,88	0/1:18,2:19:0.09:88,0,0	./.	1/1:25,0:23:0.34:1,0,0	./.	0/0:15,0:12:0:0,0,0	0/1:29,0:28:6.27:14,0,6	0/1:28,0:25:51.09:51,0,382	0/0:18,1:15:13.35:0,13,208	./.
chr10	102576716	.	CTG	C	476.05	PASS	AB=0.872;AC=11;AF=0.239;AN=46;BaseQRankSum=5.029;DP=471;FS=4.016;HRun=0;HaplotypeScore=120.1566;InbreedingCoeff=-0.0429;MQ=32.41;MQ0=18;MQRankSum=-4.907;QD=2.60;ReadPosRankSum=-2.337;VQSLOD=2.1610;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,1:19:23.65:0,24,381	0/0:9,0:8:6.92:0,7,294	./.	./.	0/0:23,0:20:24.07:0,24,423	0/0:14,0:13:3.48:0,3,53	1/1:23,0:18:2.68:12,3,0	0/1:24,4:26:99:229,0,506	0/0:8,0:8:3.01:0,3,51	0/0:30,0:27:53.99:0,54,1187	0/0:23,0:19:33.10:0,33,592	0/0:22,0:21:35.89:0,36,844	0/1:17,0:16:16.15:16,0,215	0/0:11,0:10:8.81:0,9,157	0/0:15,1:15:3.88:0,4,21	0/0:9,0:9:18.02:0,18,322	0/0:8,0:8:12.25:0,12,152	0/1:8,0:8:26.10:26,0,101	0/1:8,2:8:54.45:97,0,54	0/1:12,8:19:26.94:39,0,27	./.	./.	0/0:19,0:19:2.80:0,3,13	0/0:15,0:12:0:0,0,0	1/1:29,0:28:1.98:16,2,0	0/1:24,5:26:99:147,0,466	0/1:15,4:15:20.67:21,0,196	./.
chr10	102576718	.	GTC	G	83.62	PASS	AB=0.976;AC=9;AF=0.188;AN=48;BaseQRankSum=4.015;DP=475;FS=5.538;HRun=0;HaplotypeScore=124.1763;InbreedingCoeff=-0.0148;MQ=32.60;MQ0=20;MQRankSum=-4.525;QD=0.56;ReadPosRankSum=-1.528;VQSLOD=2.0372;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:20:20.88:0,21,346	0/0:9,0:8:20.10:0,20,301	./.	./.	0/0:24,0:20:24.08:0,24,396	0/0:12,0:11:3.01:0,3,36	1/1:18,1:14:2.60:10,3,0	0/1:27,0:25:44.55:45,0,495	0/0:8,0:8:3.01:0,3,34	0/0:30,0:27:69.97:0,70,1086	0/0:24,0:20:36.12:0,36,614	0/0:23,0:22:47.84:0,48,770	0/1:16,1:16:22.19:22,0,145	0/0:13,1:13:11.95:0,12,121	0/0:16,0:15:0.92:0,1,3	0/0:10,0:10:21.07:0,21,355	0/0:7,0:7:9.28:0,9,98	0/1:7,1:8:28.30:28,0,95	0/1:11,0:9:30.81:31,0,67	0/1:20,0:19:15.80:16,0,44	./.	0/0:23,2:23:2.97:0,3,20	0/0:18,1:19:1.82:0,2,5	0/0:15,1:13:0:0,0,0	0/0:24,3:26:0.70:0,1,2	0/1:28,0:25:48.07:48,0,394	0/1:18,0:14:1.39:1,0,127	./.
chr10	102576977	.	AACACAC	A	2743.78	PASS	AB=0.796;AC=22;AF=0.458;AN=48;BaseQRankSum=6.371;DP=608;FS=10.649;HRun=0;HaplotypeScore=155.9379;InbreedingCoeff=0.6661;MQ=54.94;MQ0=23;MQRankSum=-7.575;QD=10.20;ReadPosRankSum=2.077;VQSLOD=2.0794;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:47:36.88:0,37,505	0/0:5,0:5:6.02:0,6,188	./.	./.	0/0:14,0:14:12.04:0,12,308	1/1:5,1:8:9.02:128,9,0	1/1:30,11:42:24.01:390,24,0	0/0:19,0:19:12.04:0,12,229	1/1:13,9:22:24.08:490,24,0	0/0:27,0:27:42.13:0,42,1044	0/0:7,0:8:2.15:0,2,94	0/0:12,0:22:22.91:0,23,319	1/1:10,7:17:12.38:302,12,0	1/1:13,6:20:14.48:285,14,0	1/1:8,8:17:14.64:286,15,0	0/0:25,0:28:1.18:0,1,608	1/1:19,0:28:23.21:328,23,0	1/1:15,0:20:9.42:163,9,0	0/0:15,0:15:18:0,18,243	0/1:5,1:8:88.05:88,0,99	0/1:27,0:32:18.39:18,0,225	0/0:7,0:7:0.47:0,0,1	./.	1/1:22,12:37:8.73:142,9,0	1/1:10,5:15:15.05:306,15,0	0/0:12,0:16:38.12:0,38,878	0/0:12,0:16:13.12:0,13,183	./.
chr10	102577752	.	G	GTGTTTGTT	7393.82	PASS	AB=0.737;AC=13;AF=0.232;AN=56;BaseQRankSum=-6.522;DP=757;FS=7.071;HRun=0;HaplotypeScore=183.4201;InbreedingCoeff=0.8576;MQ=65.00;MQ0=1;MQRankSum=-7.227;QD=36.79;ReadPosRankSum=-5.620;VQSLOD=2.8001;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:86.70:0,87,1505	0/0:13,0:13:21.07:0,21,505	0/0:19,0:19:8.24:0,8,158	0/0:18,0:18:12:0,12,131	0/0:29,0:29:60.19:0,60,1433	0/0:26,0:26:51.18:0,51,1260	0/0:22,0:22:39.13:0,39,963	1/1:49,0:44:30.09:712,30,0	0/0:22,0:22:39.13:0,39,935	0/0:38,0:38:28.86:0,29,1533	0/0:18,0:18:39.12:0,39,864	0/0:19,0:19:33.11:0,33,813	0/0:24,0:24:42.14:0,42,1006	0/0:24,0:24:36.12:0,36,907	0/0:28,0:28:42.11:0,42,954	0/0:26,0:26:51.18:0,51,1258	0/0:32,0:32:75.22:0,75,1753	0/0:20,0:20:36.12:0,36,867	1/1:22,5:27:24.07:776,24,0	1/1:17,14:34:51.14:1728,51,0	1/1:17,4:20:18.06:647,18,0	0/0:43,0:43:66.23:0,66,1631	0/0:22,0:22:39.12:0,39,901	0/0:31,0:31:60.21:0,60,1468	0/0:27,0:27:60.21:0,60,1491	1/1:16,12:31:51.15:1675,51,0	0/1:18,8:28:30.43:1608,0,30	1/1:8,2:10:6.02:247,6,0
chr10	102577754	.	GTTTGT	G	1791.97	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.250;DP=755;FS=2.408;HRun=0;HaplotypeScore=149.7893;InbreedingCoeff=0.9994;MQ=63.76;MQ0=1;MQRankSum=-3.736;QD=33.18;ReadPosRankSum=3.046;VQSLOD=3.8505;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,54:54:87.30:1887,87,0	0/0:13,0:13:39.13:0,39,917	0/0:18,0:18:54.18:0,54,1077	0/0:17,0:17:51.14:0,51,933	0/0:31,0:31:93.32:0,93,2412	0/0:26,0:26:78.27:0,78,1998	0/0:24,0:24:72.24:0,72,1759	0/0:47,0:42:99:0,114,2474	0/0:22,0:22:63.21:0,63,1699	0/0:37,0:37:99:0,111,2941	0/0:20,0:20:57.19:0,57,1585	0/0:20,0:20:60.20:0,60,1604	0/0:23,0:23:69.23:0,69,1765	0/0:24,0:24:69.20:0,69,1596	0/0:27,0:27:81.26:0,81,1897	0/0:24,0:24:69.24:0,69,1920	0/0:35,0:35:99:0,102,2912	0/0:23,0:23:69.24:0,69,1789	0/0:26,0:25:75.23:0,75,1579	0/0:33,0:33:99:0,99,2229	0/0:20,0:19:51.17:0,51,1179	0/0:43,0:43:99:0,129,3088	0/0:21,0:21:63.21:0,63,1638	0/0:31,0:31:87.30:0,87,2378	0/0:28,0:28:84.28:0,84,2307	0/0:30,0:30:90.30:0,90,2259	0/0:28,0:28:84.27:0,84,1963	0/0:10,0:10:30.10:0,30,583
chr10	102577902	.	G	GCAGA	6893.76	PASS	AB=0.741;AC=17;AF=0.304;AN=56;BaseQRankSum=-12.531;DP=746;FS=0.450;HRun=0;HaplotypeScore=133.7277;InbreedingCoeff=0.5338;MQ=70.91;MQ0=3;MQRankSum=4.761;QD=23.94;ReadPosRankSum=-1.034;VQSLOD=4.2819;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:49:24.03:0,24,224	0/0:7,0:7:9.02:0,9,115	0/1:28,0:22:0:0,0,0	0/0:33,0:25:2.91:0,3,30	0/0:32,0:32:39.13:0,39,601	0/1:14,11:25:13.28:671,0,13	0/1:16,11:29:22.31:469,0,22	0/0:37,0:37:2.84:0,3,14	1/1:7,18:25:1.78:1010,2,0	0/0:35,0:35:51.17:0,51,770	0/0:20,0:20:30.10:0,30,464	0/0:22,0:22:45.15:0,45,696	0/1:9,9:19:16.29:602,0,16	1/1:14,11:26:29.13:626,29,0	1/1:17,13:30:33.11:775,33,0	0/0:31,0:32:60.20:0,60,909	0/1:17,17:33:72.62:731,0,73	0/0:26,0:26:30.10:0,30,464	0/0:10,0:15:15.02:0,15,139	0/0:16,0:27:30.03:0,30,279	0/0:20,0:37:48.02:0,48,437	1/1:8,19:28:47.80:1110,48,0	1/1:14,10:24:21.07:478,21,0	0/0:35,0:35:66.20:0,66,992	1/1:11,8:19:18.06:423,18,0	0/0:26,0:26:24.08:0,24,371	0/0:5,0:21:39.04:0,39,364	0/0:4,0:4:9.01:0,9,117
chr10	102580106	.	GTTGA	G	4215.19	PASS	AB=0.979;AC=22;AF=0.393;AN=56;BaseQRankSum=0.784;DP=739;FS=10.930;HRun=0;HaplotypeScore=153.7661;InbreedingCoeff=-0.3308;MQ=52.19;MQ0=22;MQRankSum=0.323;QD=7.00;ReadPosRankSum=-4.428;VQSLOD=1.9007;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:49,0:49:10.20:643,10,0	0/0:7,0:7:20.87:0,21,216	0/0:4,0:3:8.98:0,9,74	0/0:5,0:2:5.45:0,5,28	0/0:26,0:24:62.68:0,63,588	0/1:22,0:20:37.15:37,0,399	0/1:42,0:40:99:152,0,380	0/1:16,15:25:99:162,0,106	0/1:26,0:25:24.92:25,0,427	0/0:26,0:24:68.57:0,69,626	0/0:15,0:15:35.85:0,36,474	0/0:32,0:31:83.48:0,83,894	0/1:31,0:31:99:183,0,337	0/1:25,0:25:99:201,0,336	0/1:33,0:33:99:194,0,422	0/0:22,0:22:42.39:0,42,644	0/1:39,1:39:99:225,0,502	0/1:34,1:33:99:233,0,295	0/1:32,0:25:50.76:328,0,51	1/1:17,0:16:25.94:286,26,0	0/1:29,0:28:0.75:311,0,1	0/1:26,0:26:58.85:59,0,306	0/1:17,0:14:54.93:55,0,116	0/1:48,0:47:99:225,0,549	0/1:24,0:24:99:115,0,322	0/1:35,0:33:99:357,0,291	0/1:28,0:28:23.63:370,0,24	0/1:12,0:11:53.14:53,0,111
chr10	102581821	.	GGTGT	G	365.48	PASS	AB=0.909;AC=16;AF=0.381;AN=42;BaseQRankSum=2.953;DP=510;FS=4.417;HRun=0;HaplotypeScore=87.7458;InbreedingCoeff=0.3679;MQ=66.72;MQ0=14;MQRankSum=-0.992;QD=1.96;ReadPosRankSum=1.768;VQSLOD=1.4744;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:2.80:0,3,47	0/0:5,0:6:8.77:0,9,136	./.	./.	0/0:15,0:14:12.04:0,12,231	0/0:15,0:13:3:0,3,25	0/0:28,0:26:2.99:0,3,24	./.	1/1:17,0:17:3:28,3,0	0/0:20,0:19:5.88:0,6,55	0/0:13,0:11:6.01:0,6,91	0/0:22,0:21:21.02:0,21,368	0/0:12,0:14:2.74:0,3,12	1/1:17,0:18:2.99:28,3,0	1/1:16,0:19:8.59:83,9,0	0/0:15,0:15:12.01:0,12,184	1/1:15,0:16:3:28,3,0	1/1:14,1:18:0.56:66,1,0	0/0:17,0:17:3:0,3,27	0/1:14,4:18:5:108,0,5	1/1:27,0:25:1.82:5,2,0	0/0:17,0:16:0:0,0,0	./.	1/1:26,4:30:9.03:137,9,0	./.	0/1:22,0:22:13.76:14,0,61	./.	./.
chr10	102586838	.	T	TTCTC	3213.42	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=4.075;DP=677;FS=0.617;HRun=0;HaplotypeScore=171.9169;InbreedingCoeff=0.6978;MQ=60.27;MQ0=7;MQRankSum=-2.466;QD=7.67;ReadPosRankSum=-0.491;VQSLOD=2.9265;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:39:15.01:184,15,0	0/0:9,0:9:15.05:0,15,212	0/0:22,0:18:6.02:0,6,92	0/0:45,0:41:14.84:0,15,158	0/1:27,0:27:48.75:49,0,153	1/1:19,0:24:3.01:37,3,0	1/1:26,0:23:12.40:148,12,0	0/1:41,0:40:0.61:1,0,115	1/1:17,0:21:15.05:243,15,0	0/0:36,0:35:63.19:0,63,898	0/0:15,0:15:18.06:0,18,255	0/0:29,0:30:51.09:0,51,694	1/1:22,0:26:37.83:526,38,0	1/1:13,0:26:4.38:40,4,0	1/1:15,0:16:9.02:112,9,0	0/0:20,0:21:15.12:0,15,452	1/1:19,0:20:33.07:432,33,0	1/1:8,0:9:15.03:222,15,0	0/0:15,0:13:4.40:0,4,39	0/0:23,0:23:25.11:0,25,239	0/0:24,0:24:10.35:0,10,109	1/1:29,0:32:9.02:142,9,0	1/1:18,1:20:3:50,3,0	1/1:22,0:24:2.61:25,3,0	1/1:20,0:23:6:75,6,0	1/1:14,13:30:57.14:996,57,0	0/0:17,0:17:13.97:0,14,142	1/1:10,0:10:9.03:135,9,0
chr10	102587515	.	TAC	T	3788.03	PASS	AB=0.789;AC=26;AF=0.464;AN=56;BaseQRankSum=1.357;DP=605;FS=0.454;HRun=0;HaplotypeScore=96.0694;InbreedingCoeff=0.6380;MQ=65.38;MQ0=10;MQRankSum=0.476;QD=11.66;ReadPosRankSum=1.935;VQSLOD=2.9005;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,16:27:21.06:241,21,0	0/1:13,3:16:35.86:36,0,385	0/0:18,0:11:3:0,3,27	0/0:36,0:18:2.92:0,3,17	0/0:28,0:28:44.16:0,44,629	1/1:5,17:23:32.93:359,33,0	1/1:5,9:14:15.04:172,15,0	0/1:18,0:27:19.45:19,0,114	1/1:8,17:24:26.80:309,27,0	0/0:23,0:23:50.96:0,51,696	0/0:24,0:24:47.19:0,47,691	0/0:16,0:16:27.07:0,27,378	1/1:3,10:13:24.07:276,24,0	1/1:4,14:18:33.09:379,33,0	1/1:8,12:20:23.90:255,24,0	0/0:15,1:16:32.83:0,33,520	1/1:9,18:28:44.79:476,45,0	1/1:6,21:26:45.12:514,45,0	0/0:6,0:9:5.70:0,6,34	0/0:10,0:30:28.72:0,29,245	0/0:4,0:19:14.99:0,15,130	1/1:6,21:28:20.93:222,21,0	0/1:6,15:22:16.58:260,0,17	0/1:7,4:11:47.87:48,0,209	1/1:9,13:23:20.89:221,21,0	0/0:5,0:27:58.41:0,58,477	0/0:8,0:23:24.08:0,24,170	0/0:0,0:7:9:0,9,79
chr10	102587947	.	AGT	A	1427.56	PASS	AB=0.973;AC=14;AF=0.250;AN=56;BaseQRankSum=3.943;DP=738;FS=8.524;HRun=0;HaplotypeScore=133.2713;InbreedingCoeff=0.0892;MQ=65.89;MQ0=4;MQRankSum=0.858;QD=4.39;ReadPosRankSum=-1.438;VQSLOD=2.3248;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,3:41:26.84:279,0,27	0/0:10,0:10:30.07:0,30,456	0/0:35,0:23:60.15:0,60,881	0/0:25,0:20:51.79:0,52,736	0/0:22,0:22:60.20:0,60,976	0/1:30,0:30:35.94:36,0,49	1/1:24,0:24:23.75:251,24,0	0/0:29,0:29:63.21:0,63,1034	0/1:35,1:36:39.28:114,0,39	0/0:34,0:34:84.28:0,84,1385	0/0:25,0:25:62.94:0,63,1000	0/0:32,0:32:96.33:0,96,1628	0/1:30,2:32:16.56:185,0,17	0/1:19,1:20:13.59:120,0,14	1/1:31,2:33:3.92:252,4,0	0/0:31,0:31:83.97:0,84,1430	0/1:24,0:24:3.34:137,0,3	0/1:15,0:15:10.32:50,0,10	0/0:25,0:25:69.22:0,69,1106	0/0:18,0:18:51.17:0,51,868	0/0:46,0:46:99:0,125,2076	0/1:31,0:31:51.56:131,0,52	0/1:13,1:13:9.81:29,0,10	0/1:25,0:25:2.12:2,0,30	0/0:17,0:17:3.70:0,4,38	0/0:21,0:21:60.18:0,60,964	0/0:28,0:27:71.44:0,71,1151	0/0:15,0:15:45.15:0,45,762
chr10	102588395	.	C	CTCTG	8511.64	PASS	AB=0.940;AC=32;AF=0.571;AN=56;BaseQRankSum=5.974;DP=765;FS=8.483;HRun=0;HaplotypeScore=212.8975;InbreedingCoeff=0.4545;MQ=51.13;MQ0=26;MQRankSum=0.264;QD=16.12;ReadPosRankSum=2.502;VQSLOD=3.4016;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:43,0:42:36.74:718,37,0	0/0:5,0:5:10.29:0,10,226	0/0:39,0:12:7.84:0,8,395	0/0:63,0:18:36.75:0,37,577	0/0:21,0:21:24.54:0,25,431	1/1:14,0:14:10.50:249,10,0	0/1:24,0:22:3.42:314,0,3	1/1:30,0:28:70.77:674,71,0	0/1:45,0:44:7.75:886,0,8	0/0:36,0:34:87.20:0,87,1495	0/0:21,0:21:48.16:0,48,884	0/0:21,0:21:59.94:0,60,1061	0/1:24,0:24:77.13:467,0,77	0/1:23,1:24:1.43:278,0,1	1/1:32,0:33:34.14:479,34,0	0/0:29,0:28:56.23:0,56,1485	0/1:34,0:33:31.28:618,0,31	1/1:19,0:18:16.21:161,16,0	1/1:12,0:11:16.02:180,16,0	0/1:7,0:21:9.05:85,0,9	1/1:36,0:34:57.74:623,58,0	1/1:21,0:21:39.30:383,39,0	1/1:22,1:22:22.73:232,23,0	0/1:44,3:46:84.12:248,0,84	1/1:21,0:21:26.90:302,27,0	0/1:9,11:23:74.65:660,0,75	1/1:20,0:21:54.08:492,54,0	1/1:10,0:10:24.08:464,24,0
chr10	102588409	.	C	CTG	2472.63	PASS	AB=0.958;AC=19;AF=0.339;AN=56;BaseQRankSum=11.464;DP=711;FS=16.261;HRun=0;HaplotypeScore=196.2659;InbreedingCoeff=0.2693;MQ=48.87;MQ0=27;MQRankSum=0.524;QD=6.58;ReadPosRankSum=2.633;VQSLOD=1.9644;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:45,0:43:99:349,0,109	0/0:4,0:4:11.99:0,12,103	0/0:27,0:7:1.51:0,2,67	0/0:40,0:6:9:0,9,83	0/0:21,0:21:17.89:0,18,147	0/1:15,0:15:37.85:38,0,134	0/1:26,0:23:53.56:109,0,54	0/0:31,0:27:64.88:0,65,481	0/1:41,0:39:99:479,0,131	0/0:29,0:27:77.02:0,77,747	0/0:20,0:20:35.98:0,36,370	0/0:23,0:23:37.57:0,38,507	0/1:22,0:22:99:137,0,105	1/1:27,0:27:23.88:257,24,0	1/1:34,0:33:18.23:328,18,0	0/0:27,0:26:43.73:0,44,643	1/1:29,0:28:20.27:365,20,0	0/1:18,0:17:88.46:95,0,88	0/0:14,0:12:27.52:0,28,175	0/0:25,0:25:22.49:0,22,161	0/0:30,0:29:20.82:0,21,368	0/1:23,0:23:29.95:161,0,30	1/1:24,0:23:28.70:222,29,0	0/1:18,24:44:2.67:3,0,97	1/1:17,0:21:14.83:106,15,0	0/0:16,0:16:40.60:0,41,265	0/0:27,0:26:27.59:0,28,399	0/1:6,0:5:7.93:8,0,64
chr10	102591062	.	GGT	G	1035.89	PASS	AB=0.855;AC=31;AF=0.620;AN=50;BaseQRankSum=3.894;DP=553;FS=0.000;HRun=0;HaplotypeScore=96.1202;InbreedingCoeff=0.2496;MQ=64.67;MQ0=12;MQRankSum=0.372;QD=2.82;ReadPosRankSum=2.526;VQSLOD=1.0926;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:6:0,6,71	0/0:12,0:12:6:0,6,56	./.	./.	0/1:11,3:14:26.21:26,0,38	1/1:22,0:22:2.80:16,3,0	0/1:24,0:26:0.01:0,0,0	0/0:32,0:31:0:0,0,0	1/1:14,5:20:15.92:152,16,0	0/0:22,0:22:11.99:0,12,128	0/1:16,0:15:9.51:10,0,73	0/0:14,0:14:12.02:0,12,157	0/1:11,3:15:28.92:83,0,29	1/1:15,0:16:11.86:111,12,0	1/1:18,1:22:11.51:66,12,0	0/0:19,0:20:0.94:0,1,157	1/1:21,1:22:9.01:97,9,0	0/1:11,5:15:7.72:85,0,8	./.	1/1:7,5:13:11.86:111,12,0	0/1:36,6:40:18.92:26,0,19	1/1:12,3:15:3.01:32,3,0	1/1:15,4:20:9.74:80,10,0	1/1:18,5:23:14.87:143,15,0	0/1:16,5:21:0.93:56,0,1	1/1:16,0:17:5.33:23,5,0	1/1:20,0:20:8.34:55,8,0	1/1:4,0:4:2.84:14,3,0
chr10	102591419	.	AG	A	16186.42	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=6.611;DP=762;FS=3.193;HRun=6;HaplotypeScore=79.3147;InbreedingCoeff=0.9942;MQ=84.75;MQ0=0;MQRankSum=-6.261;QD=28.30;ReadPosRankSum=2.852;VQSLOD=5.6105;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,53:57:99:1580,147,0	0/0:10,0:10:27.09:0,27,350	0/0:26,0:27:67.76:0,68,833	0/0:26,0:26:69.12:0,69,816	0/0:19,0:19:48.14:0,48,614	1/1:1,15:16:42.10:451,42,0	1/1:4,41:45:99:1225,114,0	1/1:2,17:19:45.11:484,45,0	1/1:1,23:24:66.17:709,66,0	0/0:32,0:32:87.27:0,87,1129	0/0:10,0:10:27.09:0,27,355	0/0:38,0:38:99:0,105,1361	1/1:2,31:33:93.23:998,93,0	1/1:1,39:40:99:1225,114,0	1/1:0,34:34:96.24:1031,96,0	0/0:28,0:28:81.22:0,81,1033	1/1:4,36:40:99:1064,99,0	1/1:1,24:25:69.17:741,69,0	1/1:4,19:23:57.12:603,57,0	1/1:0,8:8:24.06:258,24,0	1/1:2,59:61:99:1708,159,0	1/1:1,23:24:63.16:677,63,0	1/1:1,17:18:48.12:516,48,0	1/1:3,29:32:87.22:935,87,0	1/1:2,17:19:48.12:515,48,0	1/1:5,26:31:41.71:790,42,0	1/1:0,18:18:51.13:548,51,0	1/1:1,4:5:12.03:128,12,0
chr10	102592566	.	TGATC	T	2004.08	PASS	AB=0.523;AC=3;AF=0.054;AN=56;BaseQRankSum=3.446;DP=640;FS=10.449;HRun=0;HaplotypeScore=158.9222;InbreedingCoeff=0.6454;MQ=88.74;MQ0=0;MQRankSum=-6.451;QD=47.72;ReadPosRankSum=-0.646;VQSLOD=4.0786;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.21:0,60,1640	0/0:12,0:12:36.07:0,36,811	0/0:31,0:31:87.23:0,87,2109	0/0:20,0:21:40.61:0,41,1191	0/0:30,0:30:87.30:0,87,2303	0/0:13,0:13:30.09:0,30,763	0/0:14,0:14:33.11:0,33,903	0/0:27,0:27:75.26:0,75,2052	0/0:17,0:17:42.14:0,42,1147	0/0:25,0:25:72.25:0,72,1953	0/0:26,0:26:75.26:0,75,2052	0/0:24,0:24:69.22:0,69,1820	0/0:23,0:23:66.23:0,66,1781	0/0:13,0:13:36.12:0,36,963	0/0:17,0:17:48.16:0,48,1301	0/0:28,0:28:84.29:0,84,2281	0/0:29,0:29:81.28:0,81,2182	0/0:16,0:16:45.15:0,45,1228	0/0:26,0:26:69.24:0,69,1872	0/0:32,0:32:96.33:0,96,2591	0/0:35,0:35:99:0,99,2649	0/0:17,0:17:39.13:0,39,1065	0/0:26,0:26:69.13:0,69,1827	0/0:30,0:30:78.27:0,78,2115	0/0:17,0:17:51.18:0,51,1391	0/1:3,31:34:64.96:1651,0,65	0/0:26,0:26:72.25:0,72,1933	1/1:1,7:8:24.08:459,24,0
chr10	102592625	.	A	AAGG	4634.32	PASS	AB=0.731;AC=13;AF=0.232;AN=56;BaseQRankSum=-7.486;DP=568;FS=32.486;HRun=0;HaplotypeScore=89.8234;InbreedingCoeff=-0.3027;MQ=73.88;MQ0=1;MQRankSum=-11.115;QD=20.24;ReadPosRankSum=1.368;VQSLOD=2.9624;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,8:17:99:469,0,338	0/0:8,0:8:21.07:0,21,391	0/0:16,0:16:36.12:0,36,616	0/0:13,0:13:36.10:0,36,584	0/0:32,0:32:96.30:0,96,1715	0/1:11,4:17:99:248,0,569	0/1:8,5:13:99:259,0,411	0/0:32,0:32:93.31:0,93,1686	0/1:7,4:12:99:268,0,252	0/0:37,0:37:99:0,111,2025	0/0:27,0:27:81.26:0,81,1479	0/0:19,0:19:57.20:0,57,1063	0/1:12,5:17:99:320,0,555	0/1:5,1:6:54.84:55,0,260	0/1:15,8:23:99:520,0,768	0/0:28,0:28:84.27:0,84,1526	0/1:10,4:13:99:258,0,410	0/1:6,5:12:99:336,0,283	0/0:21,0:21:63.21:0,63,1135	0/0:26,0:26:69.22:0,69,1256	0/0:18,0:18:54.19:0,54,1004	0/1:18,7:25:99:373,0,826	0/1:25,13:40:99:761,0,1219	0/1:5,4:11:96.55:97,0,152	0/1:12,10:22:99:671,0,603	0/0:32,0:32:96.33:0,96,1778	0/0:22,0:22:66.23:0,66,1230	0/0:8,0:8:24.08:0,24,447
chr10	102593403	.	TAC	T	577.40	PASS	AB=0.920;AC=15;AF=0.288;AN=52;BaseQRankSum=4.056;DP=546;FS=3.662;HRun=0;HaplotypeScore=69.3383;InbreedingCoeff=-0.0616;MQ=62.61;MQ0=8;MQRankSum=1.210;QD=2.53;ReadPosRankSum=1.704;VQSLOD=1.6340;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,3:35:26.65:224,27,0	0/0:10,0:10:12.04:0,12,178	./.	./.	0/0:15,0:15:9.03:0,9,132	0/1:19,5:23:14.46:14,0,205	0/0:13,1:13:11.72:0,12,177	0/0:36,0:36:6.02:0,6,85	0/1:15,2:17:5.47:5,0,287	0/1:14,2:16:50.01:50,0,117	0/1:16,1:18:17.49:17,0,120	0/1:18,0:17:37.42:37,0,149	0/0:8,0:8:6.02:0,6,89	0/1:10,0:10:26.50:26,0,39	0/0:21,0:21:21.02:0,21,247	0/0:20,0:21:36.06:0,36,490	0/1:12,1:16:29.97:60,0,30	1/1:11,7:17:10.25:244,10,0	0/0:22,0:22:6.02:0,6,89	0/1:14,1:15:20.48:20,0,120	0/0:25,0:24:36.12:0,36,522	0/1:16,0:16:14.34:14,0,205	0/0:12,0:12:17.68:0,18,204	0/0:26,0:41:15.62:0,16,289	0/1:13,1:14:14.48:14,0,178	0/0:15,0:14:14.92:0,15,140	0/0:12,0:12:18.04:0,18,238	0/1:7,0:8:5.76:6,0,39
chr10	102594061	.	T	TA	4041.35	PASS	AB=0.689;AC=24;AF=0.429;AN=56;BaseQRankSum=-9.644;DP=495;FS=32.756;HRun=10;HaplotypeScore=59.4216;InbreedingCoeff=0.5405;MQ=86.00;MQ0=2;MQRankSum=-2.639;QD=16.30;ReadPosRankSum=5.094;VQSLOD=2.1813;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,23:34:7.87:495,8,0	0/0:9,0:9:20.70:0,21,157	0/0:31,0:22:17.35:0,17,205	0/0:41,0:26:6.15:0,6,195	0/1:12,1:13:5.03:5,0,170	1/1:2,14:17:2.41:376,2,0	1/1:2,11:13:27.07:288,27,0	0/0:23,0:24:46.92:0,47,370	1/1:0,8:8:18.05:192,18,0	0/0:21,0:21:53.93:0,54,443	0/0:19,0:19:50.89:0,51,409	0/0:11,0:12:32:0,32,252	1/1:1,8:10:11.66:155,12,0	0/1:8,15:23:13.03:255,0,13	1/1:4,9:13:24.06:256,24,0	0/0:15,0:15:41.93:0,42,344	0/1:3,26:29:0.39:600,0,0	1/1:6,12:18:12.09:355,12,0	0/0:17,0:17:29.93:0,30,245	0/0:15,0:15:35.92:0,36,292	0/0:11,0:11:23.93:0,24,194	1/1:5,13:18:3.59:317,4,0	0/1:4,10:14:19.21:226,0,19	0/1:3,7:10:6.34:142,0,6	1/1:3,15:19:35.92:366,36,0	0/1:8,1:9:14.02:14,0,105	0/0:21,0:21:50.81:0,51,402	0/0:3,0:3:8.98:0,9,72
chr10	102594950	.	GTT	G	2645.07	PASS	AB=0.645;AC=21;AF=0.375;AN=56;BaseQRankSum=-2.359;DP=571;FS=6.057;HRun=16;HaplotypeScore=87.5873;InbreedingCoeff=0.6035;MQ=67.40;MQ0=15;MQRankSum=2.699;QD=10.58;ReadPosRankSum=6.884;VQSLOD=2.3927;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,15:35:16.71:325,0,17	0/0:7,0:10:22.56:0,23,186	0/0:41,0:15:13.96:0,14,145	0/0:44,0:15:5.22:0,5,39	0/0:15,0:19:28.06:0,28,226	0/1:3,9:16:1.15:165,0,1	1/1:5,8:13:14.64:122,15,0	0/0:30,0:34:50.07:0,50,399	1/1:8,0:10:11.93:82,12,0	0/0:17,0:16:37.42:0,37,366	0/0:12,0:13:32.91:0,33,370	0/0:18,0:20:41.90:0,42,461	0/1:6,4:9:30.29:77,0,30	1/1:5,6:11:11.96:121,12,0	1/1:6,9:16:29.56:270,30,0	0/0:13,0:13:27.02:0,27,316	1/1:19,10:30:63.29:524,63,0	0/1:15,4:22:15.56:109,0,16	0/0:23,0:22:28.60:0,29,196	0/0:5,0:20:26.03:0,26,189	0/0:15,0:14:11.80:0,12,79	0/1:2,7:9:12.30:174,0,12	1/1:2,14:16:18.19:298,18,0	1/1:26,10:37:10.51:358,11,0	1/1:9,13:22:23.16:221,23,0	0/0:11,0:16:16.98:0,17,216	0/0:19,0:19:41.69:0,42,419	0/0:3,0:7:6.01:0,6,57
chr10	102595165	.	AGAGG	A	945.80	PASS	AB=1.000;AC=26;AF=0.500;AN=52;BaseQRankSum=3.088;DP=327;FS=5.847;HRun=0;HaplotypeScore=72.4712;InbreedingCoeff=0.1580;MQ=41.77;MQ0=40;MQRankSum=4.056;QD=4.38;ReadPosRankSum=1.783;VQSLOD=0.6997;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:20.16:219,20,0	0/0:2,0:1:2.04:0,2,6	./.	./.	0/0:17,0:15:5.17:0,5,26	0/1:24,0:21:99:150,0,126	0/1:13,0:8:1.05:1,0,26	0/0:15,0:14:18.44:0,18,56	1/1:8,1:8:6.53:64,7,0	0/0:15,0:11:24.64:0,25,134	0/0:4,0:2:2.04:0,2,6	0/0:9,0:6:12.50:0,12,157	1/1:7,0:6:12.41:65,12,0	0/1:16,0:13:22.54:47,0,23	0/1:11,0:11:27.89:28,0,37	0/1:15,0:11:7.18:7,0,147	1/1:2,10:11:1.74:54,2,0	0/1:22,0:16:19.17:130,0,19	0/1:9,0:7:7.32:20,0,7	0/0:9,0:7:0.47:0,0,1	1/1:21,0:15:8.82:74,9,0	0/0:13,0:12:3.83:0,4,11	1/1:5,0:5:0.83:22,1,0	0/0:27,0:25:2.67:0,3,220	0/1:9,0:9:1.79:41,0,2	1/1:11,0:11:14.90:126,15,0	1/1:4,0:4:0.16:9,0,0	1/1:11,0:9:0.22:38,0,0
chr10	102595169	.	G	GGA	520.21	PASS	AB=0.928;AC=26;AF=0.542;AN=48;BaseQRankSum=-1.357;DP=349;FS=2.577;HRun=0;HaplotypeScore=75.8147;InbreedingCoeff=0.0928;MQ=41.20;MQ0=40;MQRankSum=-3.828;QD=2.08;ReadPosRankSum=-0.705;VQSLOD=1.5524;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:19:2.99:23,3,0	./.	./.	./.	0/0:16,0:14:3:0,3,29	0/1:21,1:18:52.81:53,0,78	0/1:10,4:10:5.11:80,0,5	1/1:20,0:19:5.37:21,5,0	0/1:11,1:11:21.92:76,0,22	0/0:15,0:11:5.80:0,6,45	0/0:5,0:3:1.82:0,2,5	0/0:10,0:7:11.65:0,12,108	1/1:5,2:7:9.03:132,9,0	0/1:16,0:14:8.11:38,0,8	0/1:5,6:11:16.48:121,0,16	0/0:16,0:12:8.91:0,9,97	1/1:12,0:11:2.74:12,3,0	0/0:22,0:16:6.73:0,7,49	1/1:13,0:11:2.49:6,2,0	0/1:10,0:8:0:0,0,0	0/1:22,0:17:0:0,0,0	./.	0/1:5,0:5:8.72:22,0,9	0/1:27,1:27:17.84:18,0,166	0/1:8,0:8:0:0,0,0	1/1:11,0:11:5.84:42,6,0	1/1:4,0:4:0.47:1,0,0	1/1:11,0:9:2.19:5,2,0
chr10	102596882	.	GAAAA	G	12769.55	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=4.948;DP=558;FS=3.474;HRun=14;HaplotypeScore=108.6297;InbreedingCoeff=0.9696;MQ=75.27;MQ0=1;MQRankSum=-4.068;QD=31.77;ReadPosRankSum=6.037;VQSLOD=4.0555;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:75.22:1061,75,0	0/0:4,0:6:18.06:0,18,360	0/0:27,0:19:41.32:0,41,517	0/0:17,0:17:3.82:0,4,346	0/0:27,0:28:66.69:0,67,1440	1/1:4,22:26:63.12:892,63,0	1/1:4,16:20:33.18:505,33,0	1/1:4,22:26:64.08:913,64,0	1/1:2,15:17:19.34:490,19,0	0/0:23,0:24:57.15:0,57,1215	0/0:12,0:15:42.14:0,42,893	0/0:16,0:17:45.14:0,45,913	1/1:6,17:24:45.09:618,45,0	1/1:1,8:9:21.05:297,21,0	1/1:2,16:18:45.10:637,45,0	0/0:20,0:21:48.16:0,48,1096	1/1:2,17:19:48.08:679,48,0	1/1:1,7:8:21.07:297,21,0	1/1:3,11:14:33.07:467,33,0	1/1:1,16:17:39.01:543,39,0	1/1:1,14:16:24.01:340,24,0	1/1:4,21:26:64.43:895,64,0	1/1:4,11:15:26.93:382,27,0	1/1:4,21:25:57.14:807,57,0	1/1:4,13:17:33.03:467,33,0	1/1:5,24:29:69.11:956,69,0	1/1:5,21:26:39.72:825,40,0	1/1:0,18:18:51.13:699,51,0
chr10	102597132	.	ACG	A	6414.86	PASS	AB=0.997;AC=29;AF=0.518;AN=56;BaseQRankSum=16.413;DP=678;FS=13.836;HRun=0;HaplotypeScore=110.6291;InbreedingCoeff=0.0705;MQ=60.56;MQ0=3;MQRankSum=0.100;QD=11.73;ReadPosRankSum=5.261;VQSLOD=3.8320;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:49,0:49:96.68:300,0,97	0/0:9,0:9:26.96:0,27,370	0/1:7,0:2:33.48:33,0,36	0/0:12,0:4:0.67:0,1,2	0/0:20,0:20:48.04:0,48,701	0/1:31,0:31:55.38:190,0,55	0/1:40,0:40:89.34:229,0,89	1/1:4,17:21:51.10:602,51,0	0/1:16,0:15:13.09:122,0,13	0/0:28,0:28:66.06:0,66,1016	0/0:12,0:12:34.06:0,34,408	0/0:29,0:29:75.19:0,75,1188	1/1:25,0:25:37.08:269,37,0	0/1:25,1:26:43.01:164,0,43	0/1:19,0:19:5.36:141,0,5	0/0:21,0:21:54.16:0,54,879	0/1:54,0:54:33.97:370,0,34	0/1:29,0:29:3.98:222,0,4	1/1:7,12:19:38.99:403,39,0	1/1:0,14:14:30.10:399,30,0	1/1:8,38:45:74.78:997,75,0	0/1:21,0:21:88.03:88,0,94	0/1:23,0:23:91.43:112,0,91	0/1:30,0:30:99:163,0,101	0/1:18,0:18:24.75:85,0,25	1/1:4,20:24:8.41:689,8,0	1/1:3,11:14:18.06:239,18,0	1/1:0,21:21:45.15:596,45,0
chr10	102597140	.	GCA	G	9532.32	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=12.726;DP=720;FS=10.721;HRun=0;HaplotypeScore=105.8702;InbreedingCoeff=0.4950;MQ=61.01;MQ0=4;MQRankSum=2.202;QD=16.75;ReadPosRankSum=8.496;VQSLOD=3.4172;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,40:49:92.95:1076,93,0	0/0:10,0:10:21.07:0,21,335	0/1:14,0:3:8.59:9,0,61	0/0:12,0:5:2.99:0,3,31	0/0:22,0:22:54.03:0,54,693	1/1:6,24:33:62.59:692,63,0	1/1:9,33:42:72.22:868,72,0	0/1:23,0:23:61.40:111,0,61	1/1:3,11:13:27.08:325,27,0	0/0:32,2:34:5.90:0,6,932	0/0:16,0:16:30:0,30,378	0/0:32,0:32:87.15:0,87,1183	1/1:3,23:26:56.99:687,57,0	1/1:7,17:25:38.83:411,39,0	1/1:3,17:20:41.92:506,42,0	0/0:25,0:25:66.14:0,66,934	1/1:10,40:51:75.28:1273,75,0	1/1:4,27:31:66.20:794,66,0	0/1:18,0:18:65.92:66,0,72	0/1:17,0:17:37.06:116,0,37	1/1:41,0:40:49.49:350,49,0	1/1:6,17:23:30.09:362,30,0	1/1:7,18:26:35.94:412,36,0	1/1:9,23:32:51.15:615,51,0	1/1:3,18:21:30.09:362,30,0	0/1:26,0:26:99:175,0,108	0/1:16,0:16:57.57:81,0,58	1/1:21,0:21:43.58:243,44,0
chr10	102598290	.	TAA	T	8935.49	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.471;DP=682;FS=0.305;HRun=3;HaplotypeScore=84.1260;InbreedingCoeff=0.9996;MQ=80.79;MQ0=1;MQRankSum=-1.471;QD=41.95;ReadPosRankSum=0.349;VQSLOD=4.2402;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,2412	0/0:9,0:9:27.06:0,27,484	0/0:19,0:19:54.04:0,54,875	0/0:16,0:16:46.20:0,46,687	0/0:30,0:30:90.30:0,90,1705	0/0:21,0:21:59.87:0,60,1103	0/0:18,0:18:54.18:0,54,1004	1/1:0,38:38:99:1636,111,0	0/0:22,0:22:66.21:0,66,1205	0/0:30,0:30:84.28:0,84,1552	0/0:38,0:38:99:0,114,2096	0/0:19,0:19:57.19:0,57,1063	0/0:21,0:21:63.13:0,63,1174	0/0:18,0:18:54.18:0,54,1006	0/0:19,0:19:54.19:0,54,1037	0/0:25,0:25:72.24:0,72,1360	0/0:29,0:29:84.26:0,84,1548	0/0:27,0:27:81.28:0,81,1563	1/1:1,21:22:63.20:941,63,0	1/1:0,32:32:90.31:1377,90,0	1/1:0,38:38:99:1561,102,0	0/0:11,0:11:33.11:0,33,638	0/0:9,0:9:27.09:0,27,522	0/0:25,0:25:75.24:0,75,1368	0/0:21,0:21:63.17:0,63,1149	1/1:3,42:44:99:1814,123,0	1/1:0,21:21:57.19:871,57,0	1/1:0,17:17:48.16:734,48,0
chr10	102599893	.	T	TCG	1284.70	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-1.790;DP=481;FS=2.367;HRun=0;HaplotypeScore=76.9338;InbreedingCoeff=0.9195;MQ=62.61;MQ0=13;MQRankSum=-2.391;QD=12.12;ReadPosRankSum=-2.535;VQSLOD=2.8054;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:55.78:0,56,431	0/0:4,0:4:6:0,6,58	0/0:21,0:12:32.75:0,33,310	0/0:24,0:13:18.77:0,19,256	0/0:4,0:3:2.99:0,3,23	0/0:17,0:15:32.85:0,33,273	0/0:20,0:20:25.13:0,25,202	1/1:31,0:30:55.05:408,55,0	0/0:15,0:15:23.74:0,24,200	0/0:11,0:11:24.04:0,24,246	0/0:9,0:9:18.01:0,18,186	0/0:18,0:18:42.03:0,42,428	0/0:12,0:12:26.91:0,27,217	0/0:13,0:13:20.50:0,20,171	0/0:19,0:19:44.95:0,45,378	0/0:17,0:16:45.06:0,45,472	0/0:23,0:23:56.24:0,56,459	0/0:10,0:9:13.12:0,13,94	1/1:19,4:21:47.34:456,47,0	1/1:14,0:12:17.80:122,18,0	1/1:22,0:19:38.58:299,39,0	0/0:15,0:14:35.96:0,36,299	0/0:18,0:18:32.69:0,33,256	0/0:20,0:19:28.56:0,29,239	0/0:16,0:16:32.95:0,33,275	0/0:20,0:20:40.16:0,40,433	1/1:16,0:16:14.66:172,15,0	0/0:10,0:10:21.44:0,21,175
chr10	102599935	.	TCACACACACA	T	321.53	PASS	AB=1.000;AC=7;AF=0.175;AN=40;BaseQRankSum=4.228;DP=288;FS=1.462;HRun=0;HaplotypeScore=72.9220;InbreedingCoeff=0.3174;MQ=40.35;MQ0=27;MQRankSum=-1.937;QD=4.40;ReadPosRankSum=-0.613;VQSLOD=1.5763;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:12.51:0,13,295	./.	./.	./.	0/0:5,0:4:3.01:0,3,89	0/1:11,0:8:6.41:6,0,69	0/0:15,0:12:3.01:0,3,124	0/1:17,0:13:11.55:40,0,12	./.	0/0:7,0:6:3.01:0,3,61	0/0:8,0:6:6.02:0,6,193	0/1:18,0:17:2.59:3,0,375	0/0:10,0:10:18.06:0,18,612	0/0:8,0:8:9.03:0,9,344	0/0:11,0:10:12.93:0,13,497	0/0:10,0:9:9.03:0,9,240	0/0:10,0:10:15.05:0,15,401	0/0:15,0:13:18.05:0,18,477	0/0:9,0:8:0.47:0,0,2	./.	./.	./.	0/0:9,0:9:6.02:0,6,185	0/0:26,0:21:23.04:0,23,997	0/0:6,0:6:9.03:0,9,341	1/1:12,4:16:12.04:223,12,0	1/1:10,0:11:8.99:163,9,0	./.
chr10	102600188	.	TG	T	2611.83	PASS	AB=0.734;AC=38;AF=0.704;AN=54;BaseQRankSum=-1.817;DP=238;FS=12.655;HRun=10;HaplotypeScore=31.2522;InbreedingCoeff=0.6788;MQ=84.31;MQ0=0;MQRankSum=-4.042;QD=15.10;ReadPosRankSum=4.543;VQSLOD=2.0499;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,16:21:47.98:415,48,0	./.	0/0:13,0:11:24.99:0,25,212	0/0:13,0:11:13.49:0,13,134	0/0:5,0:5:6:0,6,57	1/1:1,6:7:18:156,18,0	1/1:3,5:8:11.98:104,12,0	0/1:7,1:8:17.03:17,0,57	1/1:1,7:8:18:156,18,0	0/0:4,0:4:3.01:0,3,33	0/0:6,0:6:9.02:0,9,96	0/0:16,0:16:24:0,24,235	1/1:1,8:9:21:182,21,0	1/1:2,6:8:14.98:130,15,0	1/1:1,7:8:18:156,18,0	0/0:6,0:7:14.87:0,15,147	1/1:1,10:11:20.99:182,21,0	1/1:3,6:9:14.98:130,15,0	1/1:1,0:1:2.99:24,3,0	1/1:1,4:5:12:104,12,0	1/1:3,10:13:23.99:208,24,0	0/1:3,8:11:12.19:135,0,12	1/1:3,4:7:8.84:66,9,0	1/1:1,8:9:18:156,18,0	1/1:2,2:4:8.97:73,9,0	1/1:5,2:7:8.98:76,9,0	1/1:1,9:12:28.07:220,28,0	1/1:1,6:7:12:104,12,0
chr10	102601748	.	AACACACACAC	A	2232.50	PASS	AB=0.806;AC=25;AF=0.500;AN=50;BaseQRankSum=7.042;DP=561;FS=7.468;HRun=0;HaplotypeScore=155.9577;InbreedingCoeff=0.6074;MQ=69.23;MQ0=13;MQRankSum=-6.523;QD=8.42;ReadPosRankSum=-1.904;VQSLOD=1.9310;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:32:2.22:7,2,0	0/0:7,0:7:6.02:0,6,214	./.	./.	0/0:25,0:26:27.09:0,27,970	1/1:10,6:18:18.04:305,18,0	1/1:17,1:19:6.02:158,6,0	0/0:16,0:16:8.99:0,9,252	1/1:8,4:12:9.01:202,9,0	0/0:27,0:27:42.14:0,42,1570	0/0:7,0:7:9.03:0,9,324	0/0:23,0:22:21.07:0,21,826	1/1:9,6:15:18.06:531,18,0	1/1:9,1:11:6.02:158,6,0	1/1:11,5:16:6:177,6,0	0/1:16,0:18:30.41:30,0,613	1/1:16,0:21:5.81:140,6,0	0/1:10,0:11:53.03:63,0,53	0/0:11,0:11:3.47:0,3,27	0/0:19,0:22:15.02:0,15,345	0/0:31,0:30:36.12:0,36,1170	1/1:25,7:31:12.04:284,12,0	0/1:6,7:14:0.27:0,0,0	1/1:23,6:29:6.02:177,6,0	1/1:9,6:15:6.02:177,6,0	0/0:19,0:22:45.63:0,46,985	0/0:6,0:8:15.05:0,15,493	./.
chr10	102610177	.	G	GT	4135.81	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-10.924;DP=559;FS=4.506;HRun=9;HaplotypeScore=53.6674;InbreedingCoeff=0.9838;MQ=71.85;MQ0=0;MQRankSum=-0.725;QD=24.91;ReadPosRankSum=-1.403;VQSLOD=4.0078;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:86.97:0,87,752	0/0:10,0:10:26.99:0,27,234	0/0:11,0:10:14.58:0,15,114	0/0:9,0:8:8.93:0,9,69	0/0:21,0:21:56.98:0,57,495	0/0:24,0:24:71.91:0,72,613	0/0:22,1:23:29.79:0,30,480	1/1:9,26:35:79.44:857,79,0	0/0:22,0:22:62.97:0,63,543	0/0:25,0:25:62.97:0,63,547	0/0:16,0:16:38.99:0,39,338	0/0:15,0:15:41.99:0,42,365	0/0:19,0:19:50.98:0,51,443	0/0:12,0:12:29.99:0,30,260	0/0:21,0:21:47.91:0,48,408	0/0:15,0:15:41.97:0,42,361	0/0:28,0:28:52.11:0,52,579	0/0:21,0:21:56.99:0,57,494	1/1:11,16:29:53.94:560,54,0	1/1:3,28:32:83.99:883,84,0	1/1:3,7:10:18.05:197,18,0	0/0:15,0:15:41.99:0,42,365	0/0:19,0:19:43.72:0,44,433	0/0:11,0:11:29.97:0,30,256	0/0:26,0:26:59.97:0,60,520	1/1:2,21:23:37.13:636,37,0	1/1:2,18:20:25.08:505,25,0	1/1:2,15:17:45.12:498,45,0
chr10	102610255	.	C	CGTGT	8167.80	PASS	AB=0.658;AC=35;AF=0.648;AN=54;BaseQRankSum=-1.906;DP=650;FS=0.000;HRun=0;HaplotypeScore=128.1524;InbreedingCoeff=0.5868;MQ=63.31;MQ0=10;MQRankSum=-2.646;QD=17.09;ReadPosRankSum=0.987;VQSLOD=4.0246;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,24:45:2.11:741,0,2	0/0:8,0:10:15.03:0,15,177	./.	0/0:20,0:12:4.56:0,5,32	0/0:22,0:25:26.91:0,27,350	0/1:11,8:21:23.72:479,0,24	1/1:14,4:22:17.26:213,17,0	1/1:24,0:23:18.91:235,19,0	0/1:12,15:31:9.37:610,0,9	0/0:20,0:22:21.05:0,21,275	0/0:16,0:16:15.04:0,15,217	0/0:25,0:24:32.89:0,33,442	1/1:8,13:22:15.01:307,15,0	1/1:10,10:20:18.02:430,18,0	0/1:12,11:27:21.19:456,0,21	0/0:25,0:27:48.05:0,48,671	1/1:15,14:30:24.08:574,24,0	1/1:10,8:22:23.29:367,23,0	1/1:24,1:25:30.06:513,30,0	1/1:15,0:20:23.28:419,23,0	1/1:21,0:20:15.01:170,15,0	1/1:8,10:20:20.37:368,20,0	0/1:13,5:20:77.71:210,0,78	1/1:4,12:23:27.09:646,27,0	1/1:14,15:30:26.79:578,27,0	1/1:23,0:26:27.01:358,27,0	1/1:13,1:17:25.58:348,26,0	1/1:8,0:9:14.97:146,15,0
chr10	102611412	.	ACG	A	7362.34	PASS	AB=0.981;AC=40;AF=0.714;AN=56;BaseQRankSum=3.637;DP=724;FS=6.393;HRun=0;HaplotypeScore=122.8696;InbreedingCoeff=0.2103;MQ=53.50;MQ0=19;MQRankSum=-1.035;QD=11.22;ReadPosRankSum=-7.224;VQSLOD=1.7943;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:45,0:43:80.20:637,80,0	0/1:11,0:11:6.70:7,0,143	0/1:31,0:9:7.67:8,0,51	0/1:42,0:17:99:129,0,125	0/1:18,0:18:3.84:4,0,446	1/1:23,1:24:63.38:520,63,0	1/1:20,2:22:29.81:244,30,0	1/1:13,13:24:67.07:514,67,0	1/1:19,0:19:20.12:206,20,0	0/0:23,0:23:49.45:0,49,787	0/0:24,0:23:31.52:0,32,691	0/1:20,6:26:5.85:6,0,462	1/1:22,0:22:42.07:306,42,0	0/1:24,0:23:12.05:291,0,12	1/1:34,0:34:5.09:462,5,0	0/0:21,0:21:10.35:0,10,558	1/1:30,0:30:9.84:379,10,0	0/1:23,0:23:27.35:205,0,27	1/1:10,0:9:25.17:196,25,0	1/1:22,0:21:23.90:265,24,0	1/1:59,0:57:51.23:786,51,0	0/1:20,0:20:15.69:211,0,16	0/1:20,0:19:3.28:270,0,3	0/1:43,0:43:24.50:377,0,25	1/1:32,0:32:12.16:424,12,0	1/1:17,0:16:44.62:342,45,0	1/1:27,0:27:24.35:383,24,0	1/1:9,0:9:23.92:190,24,0
chr10	102611431	.	CAA	C	6829.23	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=4.159;DP=680;FS=29.396;HRun=3;HaplotypeScore=122.9187;InbreedingCoeff=0.5437;MQ=61.19;MQ0=11;MQRankSum=-3.192;QD=13.88;ReadPosRankSum=3.495;VQSLOD=0.6203;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:38:62.63:508,63,0	0/0:7,0:7:15.05:0,15,289	0/0:32,0:19:49.95:0,50,734	0/0:37,0:25:67.28:0,67,850	0/0:19,0:19:56.83:0,57,869	1/1:15,1:16:39.40:330,39,0	1/1:17,0:17:32.78:266,33,0	1/1:26,0:25:71.56:586,72,0	1/1:19,0:19:27.07:279,27,0	0/0:27,0:27:64.04:0,64,1147	0/0:22,0:22:45.36:0,45,829	0/0:24,0:24:43.46:0,43,839	1/1:28,0:28:52.68:398,53,0	0/1:23,0:23:33.20:228,0,33	0/1:32,0:32:9.62:429,0,10	0/0:20,0:20:24.01:0,24,826	1/1:28,0:28:11.29:386,11,0	0/1:22,0:22:36.19:202,0,36	1/1:9,6:14:13.91:273,14,0	1/1:26,0:25:32.67:360,33,0	1/1:55,0:54:43.07:750,43,0	0/1:15,0:15:26.17:183,0,26	0/1:18,0:18:16.28:228,0,16	0/1:38,0:38:31.78:337,0,32	1/1:26,0:26:11.85:301,12,0	1/1:14,0:13:27.80:222,28,0	1/1:27,0:27:19.81:374,20,0	1/1:9,0:9:23.93:189,24,0
chr10	102611537	.	A	ATATC	1915.40	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=-7.345;DP=655;FS=3.594;HRun=0;HaplotypeScore=103.3419;InbreedingCoeff=0.8182;MQ=65.24;MQ0=8;MQRankSum=0.671;QD=17.26;ReadPosRankSum=-0.244;VQSLOD=2.8234;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,11:31:27.08:633,27,0	0/0:8,0:8:11.99:0,12,185	./.	0/1:33,0:17:0:0,0,0	0/0:19,0:20:24.06:0,24,331	0/0:31,0:31:33.09:0,33,487	0/0:25,0:25:24.07:0,24,351	0/0:30,0:29:15.02:0,15,171	0/0:19,0:19:27.09:0,27,416	0/0:33,0:33:45.14:0,45,673	0/0:16,0:23:21.02:0,21,194	0/0:24,0:24:36.11:0,36,534	0/0:26,0:25:33.07:0,33,446	0/0:20,0:20:33.11:0,33,508	0/0:27,0:28:48.16:0,48,722	0/0:25,0:25:27.09:0,27,416	1/1:12,17:29:1.83:959,2,0	1/1:9,9:17:21.07:452,21,0	0/0:11,0:10:6.02:0,6,92	0/0:22,0:22:39.13:0,39,602	0/0:22,0:22:24.08:0,24,370	0/0:18,0:18:36.11:0,36,535	0/0:30,0:30:30.10:0,30,463	0/0:18,0:19:20.96:0,21,302	0/0:34,0:34:51.17:0,51,787	0/0:24,0:25:45.15:0,45,676	0/0:20,0:21:36.12:0,36,536	0/0:6,0:6:15.02:0,15,187
chr10	102612647	.	GT	G	10017.62	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=7.990;DP=597;FS=6.145;HRun=10;HaplotypeScore=86.8353;InbreedingCoeff=0.9424;MQ=75.56;MQ0=1;MQRankSum=-1.716;QD=21.64;ReadPosRankSum=3.264;VQSLOD=5.6284;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:35:95.97:833,96,0	0/0:9,1:10:1.02:0,1,238	0/0:20,1:20:7.52:0,8,269	0/0:22,0:22:33.54:0,34,351	0/0:12,0:12:36.08:0,36,384	1/1:0,26:26:77.98:677,78,0	1/1:1,23:24:62.99:547,63,0	1/1:5,21:26:62.95:541,63,0	1/1:3,23:26:62.97:547,63,0	0/0:20,0:20:42.10:0,42,451	0/0:18,0:17:48:0,48,512	0/0:15,0:15:39.11:0,39,431	1/1:3,14:17:41.99:365,42,0	1/1:2,21:23:59.98:521,60,0	1/1:2,19:22:53.03:449,53,0	0/0:14,1:15:13.05:0,13,372	1/1:4,20:24:53.98:469,54,0	1/1:2,21:23:56.98:494,57,0	1/1:4,15:19:44.96:386,45,0	1/1:1,31:31:89.98:780,90,0	1/1:6,15:21:38.98:339,39,0	1/1:3,19:22:53.98:469,54,0	1/1:0,13:13:35.99:313,36,0	1/1:3,25:28:65.98:573,66,0	1/1:4,23:27:65.02:553,65,0	1/1:3,16:19:47.99:417,48,0	1/1:3,19:22:56.94:488,57,0	1/1:4,10:14:29.98:259,30,0
chr10	102613059	.	A	AAGG	1280.15	PASS	AB=0.770;AC=14;AF=0.250;AN=56;BaseQRankSum=9.056;DP=700;FS=9.561;HRun=0;HaplotypeScore=96.3866;InbreedingCoeff=-0.3358;MQ=54.04;MQ0=20;MQRankSum=-2.175;QD=3.68;ReadPosRankSum=0.046;VQSLOD=0.9905;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,13:45:99:114,0,1247	0/0:10,0:10:27.09:0,27,459	0/0:17,0:11:15.11:0,15,374	0/0:31,0:14:25.03:0,25,467	0/0:21,0:21:57.18:0,57,935	0/1:21,7:28:58.28:58,0,893	0/1:20,19:39:95.23:95,0,800	0/0:30,0:21:51.16:0,51,820	0/0:26,13:36:5.90:0,6,991	0/0:17,0:17:48.16:0,48,816	0/0:26,0:25:66.18:0,66,1040	0/0:28,0:28:81.26:0,81,1347	0/1:15,9:23:99:232,0,557	0/1:15,7:20:24.13:24,0,578	0/1:19,12:27:71.98:72,0,638	0/0:27,0:27:78.25:0,78,1299	0/1:23,10:29:4.85:5,0,780	0/1:11,4:15:43.82:44,0,417	0/0:22,0:23:56.22:0,56,726	0/0:12,0:24:10.13:0,10,749	0/0:29,0:29:72.58:0,73,1148	0/1:6,3:8:51.08:51,0,224	0/1:11,5:14:32.37:32,0,425	0/1:14,10:21:99:170,0,383	0/1:14,6:18:87.63:88,0,432	0/1:23,3:25:99:346,0,745	0/0:15,0:24:51.11:0,51,796	0/1:10,1:11:99:103,0,321
chr10	102613996	.	A	AGCAGAG	2597.87	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.379;DP=671;FS=0.000;HRun=0;HaplotypeScore=137.7646;InbreedingCoeff=0.9352;MQ=82.46;MQ0=0;MQRankSum=-6.032;QD=89.58;ReadPosRankSum=0.116;VQSLOD=4.9015;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,2609	0/0:6,0:6:15.05:0,15,369	0/0:32,0:31:73.84:0,74,1602	0/0:26,0:26:72.18:0,72,1599	0/0:30,0:30:87.27:0,87,1958	0/0:17,0:17:42.14:0,42,998	0/0:30,0:30:81.26:0,81,1919	0/0:25,0:25:66.20:0,66,1432	0/0:19,0:19:54.17:0,54,1276	0/0:36,0:36:99:0,108,2549	0/0:11,0:11:30.10:0,30,711	0/0:25,0:25:72.22:0,72,1609	0/0:38,0:38:99:0,114,2709	0/0:25,0:25:69.20:0,69,1595	0/0:34,0:34:99:0,102,2476	0/0:21,0:21:63.22:0,63,1527	0/0:29,0:29:81.28:0,81,1968	0/0:17,0:17:45.15:0,45,1014	0/0:21,0:21:54.09:0,54,1133	0/0:23,0:23:57.17:0,57,1215	0/0:32,0:32:93.32:0,93,2220	0/0:24,0:24:63.22:0,63,1535	0/0:20,0:20:60.19:0,60,1392	0/0:22,0:22:66.23:0,66,1619	0/0:24,0:24:60.21:0,60,1392	1/1:4,18:26:78.23:2490,78,0	0/0:18,0:18:54.19:0,54,1324	1/1:0,2:3:6.02:219,6,0
chr10	102614379	.	C	CGTGTGTGTGTGTGTGT	5751.27	PASS	AB=0.869;AC=34;AF=0.708;AN=48;BaseQRankSum=-1.980;DP=541;FS=55.412;HRun=0;HaplotypeScore=224.9691;InbreedingCoeff=0.4233;MQ=50.30;MQ0=11;MQRankSum=-3.143;QD=12.78;ReadPosRankSum=-2.751;VQSLOD=1.9177;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:27:18.95:497,19,0	0/0:4,0:4:3.01:0,3,110	./.	./.	0/0:13,0:13:6.02:0,6,194	1/1:26,0:25:8.24:94,8,0	1/1:29,0:26:15.94:415,16,0	1/1:28,0:26:21.80:506,22,0	1/1:22,0:21:15.04:433,15,0	0/1:27,0:29:2.91:3,0,498	0/0:15,0:15:1.57:0,2,476	0/1:21,0:21:2.97:3,0,349	1/1:19,1:20:27.03:886,27,0	1/1:25,0:25:0.47:1,0,0	1/1:22,0:20:8.56:157,9,0	0/0:13,0:13:15.05:0,15,406	1/1:21,0:18:26.21:666,26,0	0/1:20,0:18:3.39:1029,0,3	1/1:19,0:18:22.10:516,22,0	./.	1/1:43,0:40:12.13:185,12,0	0/1:8,0:12:0:0,0,0	./.	1/1:24,0:20:6.02:164,6,0	0/1:13,7:21:0:0,0,0	0/1:14,0:18:48.17:48,0,152	1/1:12,0:11:6.01:144,6,0	1/1:4,0:6:1.36:3,1,0
chr10	102614508	.	GA	G	926.72	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.447;DP=667;FS=12.350;HRun=1;HaplotypeScore=77.3720;InbreedingCoeff=0.9998;MQ=88.92;MQ0=0;MQRankSum=-2.359;QD=35.64;ReadPosRankSum=2.703;VQSLOD=2.9601;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.19:0,57,911	0/0:12,0:12:36.12:0,36,576	0/0:25,0:25:74.98:0,75,1082	0/0:26,0:26:78.16:0,78,1127	0/0:27,0:27:81.25:0,81,1267	0/0:26,0:26:75.24:0,75,1172	0/0:24,0:24:69.22:0,69,1079	0/0:20,0:20:60.20:0,60,940	0/0:25,0:25:75.26:0,75,1196	0/0:20,0:20:53.85:0,54,861	0/0:19,0:18:54.18:0,54,863	0/0:23,0:23:69.24:0,69,1102	0/0:21,0:21:63.16:0,63,954	0/0:26,0:26:77.98:0,78,1175	0/0:26,0:26:75.26:0,75,1199	0/0:16,0:16:48.16:0,48,767	0/0:52,0:52:99:0,148,2350	0/0:21,0:21:57.19:0,57,911	0/0:19,0:19:54.17:0,54,840	0/0:27,0:27:78.27:0,78,1244	0/0:42,0:42:99:0,117,1867	0/0:21,0:21:60.17:0,60,907	0/0:15,0:15:42.13:0,42,640	0/0:32,0:32:87.28:0,87,1365	0/0:30,0:30:87.30:0,87,1389	1/1:0,14:14:42.14:587,42,0	0/0:24,0:23:69.24:0,69,1102	1/1:0,12:12:33.11:461,33,0
chr10	102615141	.	GAA	G	1212.70	PASS	AB=0.613;AC=8;AF=0.143;AN=56;BaseQRankSum=-4.091;DP=560;FS=13.176;HRun=13;HaplotypeScore=80.1671;InbreedingCoeff=0.6935;MQ=50.44;MQ0=25;MQRankSum=3.958;QD=11.33;ReadPosRankSum=0.101;VQSLOD=0.8666;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:34:23.81:0,24,199	0/0:9,0:9:17.41:0,17,199	0/0:9,0:6:10.26:0,10,104	0/0:10,0:5:13.56:0,14,127	0/0:36,0:33:61.80:0,62,715	0/0:4,0:18:20.96:0,21,183	0/0:8,0:16:19.19:0,19,155	1/1:8,16:25:20.23:346,20,0	0/0:6,0:19:24.01:0,24,230	0/0:25,0:25:43.62:0,44,390	0/0:21,0:21:51.11:0,51,652	0/0:19,0:16:38.96:0,39,464	0/0:8,0:14:23.57:0,24,192	0/0:8,0:20:23.77:0,24,181	0/0:6,0:18:9.01:0,9,84	0/0:12,0:12:28.63:0,29,295	0/0:14,0:23:20.07:0,20,207	0/0:9,0:19:20.96:0,21,185	1/1:8,12:19:34.72:292,35,0	0/1:7,10:13:21.44:142,0,21	1/1:4,12:15:18.02:175,18,0	0/0:13,0:12:29.93:0,30,271	0/0:19,0:20:44.09:0,44,381	0/0:12,0:27:18.02:0,18,170	0/0:4,0:12:14.99:0,15,135	0/0:4,0:23:44.48:0,44,379	0/1:9,19:26:6.66:410,0,7	0/0:12,0:9:17.93:0,18,157
chr10	102616494	.	GACAAGTGTTCGCCTTTCC	G	3391.11	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.045;DP=719;FS=2.783;HRun=0;HaplotypeScore=333.2741;InbreedingCoeff=0.9834;MQ=83.17;MQ0=0;MQRankSum=-6.772;QD=99.74;ReadPosRankSum=1.397;VQSLOD=2.5296;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,8948	0/0:9,0:9:27.09:0,27,1763	0/0:18,0:18:48.16:0,48,3123	0/0:24,0:24:66.23:0,66,4187	0/0:27,0:27:78.25:0,78,5815	0/0:24,0:24:72.25:0,72,4992	0/0:33,0:33:96.29:0,96,7593	0/0:26,0:26:75.25:0,75,5391	0/0:30,0:30:90.30:0,90,6952	0/0:25,0:25:63.22:0,63,4698	0/0:15,0:15:45.14:0,45,2744	0/0:30,0:30:87.26:0,87,6393	0/0:18,0:18:54.17:0,54,3949	0/0:22,0:22:66.21:0,66,5097	0/0:18,0:18:48.16:0,48,4017	0/0:23,0:23:69.24:0,69,5225	0/0:35,0:35:99:0,99,7601	0/0:43,0:43:99:0,126,9944	0/0:28,0:28:84.28:0,84,5233	0/0:15,0:15:42.14:0,42,3223	0/0:58,0:58:99:0,175,13533	0/0:22,0:22:60.21:0,60,4748	0/0:15,0:15:42.14:0,42,3139	0/0:42,0:42:99:0,123,9890	0/0:23,0:23:61.08:0,61,4479	1/1:10,19:29:57.20:2774,57,0	0/0:21,0:21:57.18:0,57,4397	1/1:0,5:5:12.04:617,12,0
chr10	102617288	.	CGTGGCCTTGTTGGAGGGGT	C	637.62	PASS	AB=1.000;AC=5;AF=0.093;AN=54;BaseQRankSum=5.198;DP=584;FS=0.890;HRun=0;HaplotypeScore=299.0709;InbreedingCoeff=0.7844;MQ=57.55;MQ0=6;MQRankSum=1.424;QD=14.49;ReadPosRankSum=-0.824;VQSLOD=1.8580;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:70.54:0,71,1999	0/0:7,0:7:20.93:0,21,389	./.	0/1:20,0:4:1.61:27,0,2	0/0:11,0:11:27.08:0,27,1039	0/0:17,0:17:32.29:0,32,1401	0/0:42,0:41:96.71:0,97,1651	0/0:20,0:19:33.08:0,33,488	0/0:31,0:31:69.45:0,69,2193	0/0:17,0:17:48.13:0,48,1738	0/0:14,0:14:33.10:0,33,1264	0/0:27,0:27:66.20:0,66,2079	0/0:24,0:24:64.73:0,65,2485	0/0:27,0:27:64.30:0,64,1567	0/0:11,0:11:26.26:0,26,1257	0/0:13,0:13:36.55:0,37,1334	0/0:45,0:44:84.87:0,85,3125	0/0:21,0:20:50.34:0,50,1817	0/0:13,0:11:18.05:0,18,425	0/0:8,0:8:18.06:0,18,716	0/0:53,0:53:99:0,120,3368	0/0:15,0:15:36.07:0,36,826	0/0:4,0:4:5.61:0,6,68	0/0:55,0:55:99:0,129,4888	0/0:8,0:8:21.07:0,21,767	1/1:4,15:19:41.22:654,41,0	0/0:14,0:14:30.09:0,30,1228	1/1:5,0:5:6.02:77,6,0
chr10	102617302	.	AG	A	9623.67	PASS	AC=26;AF=0.481;AN=54;BaseQRankSum=7.886;DP=582;FS=6.734;HRun=4;HaplotypeScore=61.1325;InbreedingCoeff=0.9691;MQ=56.77;MQ0=16;MQRankSum=0.669;QD=30.26;ReadPosRankSum=4.832;VQSLOD=4.9911;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:25:69.21:827,69,0	0/0:8,0:8:15.01:0,15,188	./.	0/0:20,0:2:5.23:0,5,36	0/0:11,0:11:27.09:0,27,377	1/1:0,15:15:39.12:468,39,0	1/1:1,41:41:99:1224,102,0	0/0:19,0:18:39.06:0,39,491	1/1:2,27:29:72.22:863,72,0	0/0:25,0:25:54.17:0,54,740	0/0:14,0:14:36.12:0,36,502	0/0:24,0:24:72.23:0,72,985	1/1:3,27:30:63.19:755,63,0	1/1:2,24:26:66.20:782,66,0	1/1:0,10:10:30.09:360,30,0	0/0:18,0:18:48.16:0,48,669	1/1:5,37:42:72.49:1289,72,0	1/1:0,19:19:57.17:684,57,0	0/0:18,0:13:33.11:0,33,449	0/0:9,0:9:27.08:0,27,364	0/0:56,0:54:99:0,144,1927	1/1:6,7:13:27.08:321,27,0	1/1:0,3:3:9.03:108,9,0	1/1:4,47:51:99:1620,135,0	1/1:1,11:11:27.08:324,27,0	0/0:15,0:15:30.17:0,30,270	0/0:12,0:12:36.10:0,36,485	0/0:7,0:7:14.60:0,15,141
chr10	102617306	.	GT	G	3173.62	PASS	AB=1.000;AC=25;AF=0.463;AN=54;BaseQRankSum=14.682;DP=575;FS=9.548;HRun=1;HaplotypeScore=84.3188;InbreedingCoeff=0.8362;MQ=56.47;MQ0=19;MQRankSum=1.975;QD=10.04;ReadPosRankSum=6.399;VQSLOD=0.7711;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:26:43.18:302,43,0	0/0:7,0:7:15.02:0,15,209	./.	0/0:20,0:2:5.23:0,5,37	0/0:12,0:11:30.09:0,30,439	1/1:15,0:15:35.88:166,36,0	1/1:43,0:42:57.08:405,57,0	0/0:15,0:14:39.12:0,39,576	1/1:28,0:28:45.67:302,46,0	0/0:23,0:23:60.17:0,60,891	0/0:13,0:13:39.05:0,39,571	0/0:27,0:27:75.23:0,75,1126	1/1:27,0:27:58.92:297,59,0	1/1:25,2:27:40.14:318,40,0	0/1:14,0:14:59.27:90,0,59	0/0:18,0:18:51.16:0,51,762	1/1:39,1:40:39.80:434,40,0	1/1:19,0:19:52.65:248,53,0	0/0:18,0:13:36.09:0,36,511	0/0:9,0:9:27.09:0,27,420	0/0:55,0:53:99:0,144,2141	1/1:8,2:10:3.60:159,4,0	1/1:3,0:3:8.34:44,8,0	1/1:49,0:49:91.45:533,91,0	1/1:14,0:13:2.79:86,3,0	0/0:15,0:15:8.62:0,9,269	0/0:11,0:11:33.11:0,33,515	0/0:8,0:8:14.98:0,15,142
chr10	102617418	.	GTCTC	G	257.98	PASS	AB=1.000;AC=12;AF=0.286;AN=42;BaseQRankSum=0.898;DP=508;FS=12.589;HRun=0;HaplotypeScore=84.9864;InbreedingCoeff=0.2763;MQ=63.16;MQ0=28;MQRankSum=1.503;QD=1.82;ReadPosRankSum=2.411;VQSLOD=0.8192;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:20:23.79:49,0,24	0/0:17,0:17:7.06:0,7,67	./.	./.	./.	0/1:17,0:16:7.70:38,0,8	0/0:33,0:29:15:0,15,171	./.	1/1:12,2:14:0.17:10,0,0	0/0:21,0:20:9.02:0,9,142	./.	0/0:11,0:11:3.01:0,3,51	0/0:13,0:13:13.27:0,13,215	./.	0/1:11,0:11:12.98:18,0,13	0/0:12,0:12:6.02:0,6,114	1/1:17,12:29:12.04:183,12,0	0/0:20,0:20:2.08:0,2,8	0/0:21,0:19:6.02:0,6,132	0/1:19,0:18:0.08:0,0,0	0/0:23,0:21:6.02:0,6,131	0/0:19,0:18:3.58:0,4,86	0/0:20,0:20:2.14:0,2,7	0/0:17,0:17:11.70:0,12,94	./.	1/1:19,0:19:5.54:54,6,0	0/0:13,0:11:1.25:0,1,3	1/1:9,0:8:3:28,3,0
chr10	102617456	.	CTCTCTCTCTCTCTCTCTT	C	614.39	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=5.410;DP=447;FS=1.988;HRun=0;HaplotypeScore=166.7357;InbreedingCoeff=0.6750;MQ=52.54;MQ0=33;MQRankSum=0.021;QD=12.80;ReadPosRankSum=-0.177;VQSLOD=2.7744;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:23:45.89:0,46,1293	0/0:9,0:9:23.08:0,23,804	0/1:21,0:7:8.82:9,0,94	0/0:24,0:4:11.91:0,12,95	0/0:10,0:10:16.90:0,17,191	0/0:16,0:16:42.16:0,42,1605	0/0:32,0:30:66.61:0,67,2073	0/0:15,0:12:34.30:0,34,510	0/0:15,0:14:28:0,28,1281	0/0:15,0:13:37.86:0,38,1463	0/0:7,0:7:18.03:0,18,302	0/0:11,0:11:24.48:0,24,546	0/0:18,0:17:38.55:0,39,1873	0/0:12,0:11:27.06:0,27,925	0/0:13,0:13:33.04:0,33,1023	0/0:14,0:14:36.09:0,36,1336	0/0:30,0:30:66.15:0,66,2403	0/0:24,0:22:55.77:0,56,1897	0/0:11,0:8:24.05:0,24,902	0/0:6,0:6:9.90:0,10,100	0/0:15,0:14:21.50:0,22,695	0/0:15,0:14:36.01:0,36,1213	0/0:18,0:18:42.53:0,43,1401	0/0:21,0:19:48.58:0,49,2277	0/0:11,0:10:18.49:0,18,551	1/1:7,13:19:3.77:473,4,0	0/0:10,0:8:24.03:0,24,411	1/1:7,0:6:17.91:246,18,0
chr10	102617835	.	A	ACT	22374.52	PASS	AB=0.577;AC=37;AF=0.661;AN=56;BaseQRankSum=9.894;DP=1301;FS=2.026;HRun=0;HaplotypeScore=286.7506;InbreedingCoeff=0.7653;MQ=51.89;MQ0=20;MQRankSum=-0.848;QD=22.76;ReadPosRankSum=5.969;VQSLOD=5.0369;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,53:70:99:1783,104,0	0/0:16,0:16:45:0,45,564	0/0:42,0:11:19.76:0,20,179	0/0:76,0:18:29.31:0,29,355	0/0:31,0:31:84.16:0,84,1183	1/1:8,33:41:48.85:1136,49,0	1/1:8,52:60:84.43:1474,84,0	1/1:5,52:57:99:2049,142,0	1/1:17,46:65:63.15:1443,63,0	0/0:48,0:48:99:0,141,1966	0/0:17,0:17:51.10:0,51,707	0/0:52,0:51:99:0,129,1809	1/1:16,31:47:10.11:1012,10,0	1/1:19,50:70:77.37:1386,77,0	1/1:14,40:54:54.92:1065,55,0	0/0:36,0:36:99:0,99,1389	1/1:13,37:52:66.08:1476,66,0	0/1:13,22:37:99:821,0,120	1/1:5,16:20:8.81:517,9,0	1/1:10,25:34:57.13:991,57,0	1/1:24,93:114:99:1946,113,0	1/1:11,28:40:20.80:719,21,0	1/1:9,27:36:57:1007,57,0	1/1:17,46:64:81.43:1448,81,0	1/1:9,18:27:23.01:568,23,0	1/1:8,0:42:21.08:769,21,0	0/1:9,24:34:75.51:689,0,76	0/1:1,1:7:3.72:76,0,4
chr10	102617983	.	CACAG	C	743.89	PASS	AB=0.789;AC=2;AF=0.036;AN=56;BaseQRankSum=7.232;DP=1295;FS=7.009;HRun=0;HaplotypeScore=265.5130;InbreedingCoeff=-0.0371;MQ=59.05;MQ0=14;MQRankSum=-4.782;QD=10.78;ReadPosRankSum=-1.486;VQSLOD=1.9948;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:78,0:78:99:0,212,5214	0/0:10,0:10:27.09:0,27,706	0/0:47,0:20:42.51:0,43,1028	0/0:64,0:41:70.82:0,71,1611	0/0:27,0:27:69.21:0,69,1673	0/0:34,0:34:72.11:0,72,1679	0/0:46,0:46:99:0,117,2888	0/0:48,0:47:99:0,114,2700	0/0:53,0:53:99:0,138,3359	0/0:60,0:58:99:0,153,3712	0/0:35,0:35:99:0,105,2439	0/0:56,0:56:99:0,144,3678	0/0:46,0:46:99:0,114,2791	0/0:59,0:59:99:0,156,3870	0/0:45,0:45:99:0,111,2873	0/0:36,0:36:96.30:0,96,2370	0/0:50,0:50:99:0,132,3156	0/0:37,0:37:99:0,99,2515	0/0:24,0:23:60.17:0,60,1361	0/0:39,0:39:99:0,111,2672	0/0:135,0:135:99:0,362,8841	0/0:42,0:42:99:0,99,2171	0/0:27,0:27:75.26:0,75,1912	0/0:74,0:74:99:0,165,4302	0/0:25,0:25:66.68:0,67,1595	0/1:41,12:50:99:548,0,1647	0/0:27,0:27:75.21:0,75,1748	0/1:11,5:16:99:285,0,454
chr10	102618008	.	GCA	G	956.20	PASS	AB=0.785;AC=4;AF=0.071;AN=56;BaseQRankSum=10.284;DP=1284;FS=3.461;HRun=0;HaplotypeScore=201.6945;InbreedingCoeff=0.0408;MQ=56.16;MQ0=9;MQRankSum=-0.318;QD=4.95;ReadPosRankSum=0.109;VQSLOD=3.1004;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:69,0:69:99:0,181,2890	0/0:7,0:7:18.06:0,18,296	0/0:45,0:22:31.22:0,31,400	0/0:69,0:35:50.93:0,51,634	0/0:21,1:22:22.39:0,22,852	0/0:29,2:31:25.30:0,25,953	0/0:43,2:43:51.94:0,52,1364	0/0:42,1:41:61.44:0,61,1451	0/1:57,3:60:4.28:4,0,1893	0/0:54,0:54:84.53:0,85,1977	0/0:36,1:37:55.49:0,55,1415	0/0:54,3:57:50.74:0,51,1875	0/0:44,2:46:64.54:0,65,1551	0/0:59,0:59:99:0,110,2256	0/0:45,2:47:38.70:0,39,1637	0/0:36,1:37:61.54:0,62,1544	0/0:52,1:54:54.39:0,54,2074	0/0:41,4:45:58.99:0,59,1474	0/0:23,2:24:8.57:0,9,625	0/0:35,1:36:55.44:0,55,1363	0/0:142,3:145:99:0,198,5504	0/0:34,0:34:80.30:0,80,1260	0/0:28,1:29:69.22:0,69,1105	0/1:67,6:74:99:103,0,2083	0/0:26,0:26:21.62:0,22,850	0/1:26,20:44:99:659,0,182	0/0:29,0:29:69.22:0,69,1095	0/1:3,10:13:5.28:293,0,5
chr10	102618649	.	CA	C	1129.18	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.523;DP=715;FS=11.116;HRun=3;HaplotypeScore=76.0275;InbreedingCoeff=0.9978;MQ=81.99;MQ0=0;MQRankSum=-2.131;QD=33.21;ReadPosRankSum=1.838;VQSLOD=3.6176;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1425	0/0:7,0:7:21.07:0,21,302	0/0:12,0:12:36.10:0,36,475	0/0:28,0:27:73.78:0,74,1007	0/0:22,0:22:60.20:0,60,863	0/0:18,0:18:51.17:0,51,733	0/0:31,0:31:87.27:0,87,1215	0/0:26,0:26:72.24:0,72,1037	0/0:36,0:36:99:0,108,1519	0/0:24,0:24:72.22:0,72,987	0/0:16,0:16:45.15:0,45,648	0/0:24,0:24:72.23:0,72,1003	0/0:27,0:27:81.26:0,81,1146	0/0:27,0:27:81.25:0,81,1132	0/0:39,0:39:99:0,117,1627	0/0:32,0:32:93.27:0,93,1281	0/0:31,0:31:93.29:0,93,1302	0/0:19,0:19:57.13:0,57,777	0/0:20,0:20:51.17:0,51,732	0/0:34,0:34:99:0,99,1406	0/0:38,0:38:99:0,114,1621	0/0:26,0:26:63.20:0,63,886	0/0:20,0:20:57.18:0,57,802	0/0:31,0:31:93.24:0,93,1279	0/0:22,0:22:63.21:0,63,906	1/1:0,20:20:60.18:731,60,0	0/0:38,0:38:99:0,114,1580	1/1:0,14:14:42.13:520,42,0
chr10	102619228	.	GAA	G	4983.30	PASS	AB=0.875;AC=27;AF=0.482;AN=56;BaseQRankSum=6.200;DP=558;FS=1.217;HRun=14;HaplotypeScore=72.3668;InbreedingCoeff=0.8965;MQ=80.71;MQ0=1;MQRankSum=1.109;QD=17.24;ReadPosRankSum=6.654;VQSLOD=4.0123;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,33:43:68.80:685,69,0	0/0:16,0:19:47.62:0,48,583	0/0:26,0:24:5.27:0,5,271	0/0:14,0:12:8.65:0,9,66	0/0:14,0:18:41.07:0,41,461	1/1:5,15:21:29.80:324,30,0	1/1:2,18:21:50.78:456,51,0	0/0:22,0:26:25.47:0,25,536	1/1:1,13:14:33.02:305,33,0	0/0:27,0:28:50.57:0,51,608	0/0:16,0:16:36.81:0,37,422	0/0:11,0:12:27.01:0,27,335	1/1:1,14:16:35.77:317,36,0	1/1:1,16:17:21.75:242,22,0	1/1:5,20:25:11.09:280,11,0	0/0:13,0:15:38.58:0,39,451	1/1:2,16:19:45.02:416,45,0	1/1:5,22:27:63.04:583,63,0	0/0:12,0:14:29.56:0,30,356	0/0:12,0:15:32.58:0,33,393	0/0:21,0:21:48.59:0,49,621	1/1:5,12:20:21.82:338,22,0	1/1:4,12:18:17.61:260,18,0	1/1:4,19:22:50.38:452,50,0	1/1:5,13:18:32.94:305,33,0	0/0:20,0:23:40.49:0,40,401	0/0:20,0:20:39.06:0,39,460	0/1:6,1:7:18.75:19,0,60
chr10	102621382	.	T	TA	1488.58	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-6.564;DP=717;FS=5.105;HRun=8;HaplotypeScore=72.0703;InbreedingCoeff=0.7805;MQ=80.04;MQ0=0;MQRankSum=-0.921;QD=18.61;ReadPosRankSum=-0.539;VQSLOD=3.3386;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.03:0,87,796	0/0:20,0:20:60.03:0,60,549	0/1:24,0:24:25.53:26,0,292	0/0:18,0:19:34.20:0,34,299	0/0:30,0:30:75.01:0,75,681	0/0:27,0:27:59.92:0,60,528	0/0:11,0:11:30:0,30,269	0/0:23,0:23:57.02:0,57,519	0/0:31,0:31:87.02:0,87,792	0/0:29,1:30:49.42:0,49,707	0/0:25,0:25:54:0,54,494	0/0:27,0:27:81.04:0,81,741	0/0:30,0:30:72.01:0,72,659	0/0:25,0:25:72.04:0,72,658	0/0:20,0:20:48.02:0,48,439	0/0:34,0:34:90.01:0,90,815	0/0:23,0:23:60.02:0,60,549	0/0:13,0:13:36.02:0,36,330	0/0:23,0:23:51:0,51,463	0/0:32,0:32:87.03:0,87,794	0/0:22,0:22:51.02:0,51,467	0/0:17,0:17:36:0,36,329	0/0:25,0:25:60.02:0,60,547	0/0:38,0:37:99:0,99,906	0/0:25,1:26:33.99:0,34,544	1/1:6,29:35:87.21:970,87,0	0/0:34,0:34:96.04:0,96,879	1/1:1,20:21:54.16:623,54,0
chr10	102622961	.	A	AC	714.76	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.786;DP=618;FS=0.738;HRun=7;HaplotypeScore=82.4015;InbreedingCoeff=0.9362;MQ=78.08;MQ0=0;MQRankSum=-0.738;QD=20.42;ReadPosRankSum=2.058;VQSLOD=3.2456;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:81.03:0,81,751	0/0:10,0:10:27.04:0,27,261	0/0:18,0:18:8.49:0,8,215	0/0:19,0:19:11.88:0,12,358	0/0:18,0:18:36.47:0,36,336	0/0:21,0:21:53.93:0,54,494	0/0:35,0:35:78.05:0,78,741	0/0:17,0:17:18.02:0,18,174	0/0:24,0:24:66.09:0,66,631	0/0:13,0:13:21.01:0,21,200	0/0:12,0:12:30.04:0,30,287	0/0:33,0:33:93.14:0,93,895	0/0:28,0:28:75.11:0,75,723	0/0:37,0:37:96.13:0,96,920	0/0:17,0:17:45.06:0,45,429	0/0:21,0:21:54.08:0,54,521	0/0:24,0:24:53.90:0,54,506	0/0:33,0:33:81.10:0,81,775	0/0:17,0:17:33.03:0,33,315	0/0:6,0:6:15.02:0,15,144	0/0:50,0:50:99:0,123,1187	0/0:14,0:14:26.63:0,27,298	0/0:19,0:19:54.08:0,54,519	0/0:23,0:23:51.07:0,51,492	0/0:20,0:20:53.74:0,54,509	1/1:7,13:20:24.92:509,25,0	0/0:14,0:14:36.05:0,36,348	1/1:4,11:15:27.08:326,27,0
chr10	102623429	.	C	CGT	4835.16	PASS	AB=0.592;AC=10;AF=0.179;AN=56;BaseQRankSum=3.209;DP=775;FS=5.417;HRun=0;HaplotypeScore=109.7049;InbreedingCoeff=0.5138;MQ=58.55;MQ0=13;MQRankSum=-0.148;QD=23.25;ReadPosRankSum=-0.706;VQSLOD=5.0385;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:86.30:0,86,1084	0/0:12,0:13:38.79:0,39,434	0/0:42,0:18:30.02:0,30,324	0/0:50,0:27:23.17:0,23,451	0/0:31,0:31:66.18:0,66,778	0/0:30,0:30:75.22:0,75,909	0/0:23,0:24:66:0,66,771	0/1:14,17:31:58.70:648,0,59	0/0:26,0:27:62.89:0,63,701	0/0:23,0:25:53.47:0,53,602	0/0:13,0:13:11.15:0,11,369	0/0:32,0:32:59.76:0,60,699	0/0:30,0:30:59.41:0,59,755	0/0:23,0:23:63.19:0,63,763	0/0:10,0:10:27.06:0,27,308	0/0:10,0:10:24.08:0,24,295	0/0:30,0:31:66.92:0,67,836	0/0:23,0:24:53.36:0,53,609	1/1:14,7:19:27.03:383,27,0	0/1:7,27:34:7.20:912,0,7	0/1:15,35:52:39.43:998,0,39	0/0:17,0:17:51.16:0,51,627	0/0:27,0:27:69.21:0,69,854	0/0:27,0:27:54.17:0,54,664	0/0:39,0:39:84.20:0,84,996	1/1:6,25:32:44.32:1199,44,0	0/1:7,17:24:30.02:547,0,30	1/1:2,9:11:9.03:147,9,0
chr10	102625336	.	TC	T	1956.57	PASS	AB=1.000;AC=28;AF=0.538;AN=52;BaseQRankSum=2.381;DP=181;FS=2.349;HRun=5;HaplotypeScore=18.8423;InbreedingCoeff=0.7229;MQ=79.08;MQ0=1;MQRankSum=1.143;QD=16.04;ReadPosRankSum=4.888;VQSLOD=1.5031;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:9:15.04:170,15,0	0/0:2,0:2:6.01:0,6,63	0/1:11,0:7:2.60:3,0,101	0/1:12,0:9:0.14:0,0,106	0/0:7,0:7:18.06:0,18,245	1/1:0,6:6:12.03:136,12,0	1/1:0,12:12:21.06:238,21,0	0/0:10,0:10:21.01:0,21,221	1/1:0,9:9:15.04:170,15,0	0/0:10,0:10:27.04:0,27,346	0/0:2,0:2:6.01:0,6,66	0/0:4,0:4:12.03:0,12,150	1/1:1,10:11:21.06:238,21,0	1/1:0,9:9:24.07:272,24,0	1/1:2,6:8:12.03:136,12,0	./.	1/1:0,16:16:30.09:340,30,0	1/1:0,6:6:15.04:170,15,0	0/0:5,0:5:12.04:0,12,163	./.	0/0:9,0:9:18.06:0,18,246	1/1:0,2:2:6.02:68,6,0	1/1:0,2:1:3.01:34,3,0	1/1:1,7:8:12.03:136,12,0	1/1:0,1:1:3.01:34,3,0	0/0:4,0:4:12.04:0,12,163	0/0:3,0:3:2.99:0,3,24	0/0:1,0:1:3.01:0,3,41
chr10	102626064	.	A	AT	369.56	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=1.746;DP=506;FS=1.084;HRun=6;HaplotypeScore=49.7367;InbreedingCoeff=0.9441;MQ=88.20;MQ0=0;MQRankSum=6.566;QD=20.53;ReadPosRankSum=-3.430;VQSLOD=2.2633;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,1377	0/0:6,0:6:15.03:0,15,153	1/1:6,12:18:23.93:463,24,0	0/0:18,0:18:11.18:0,11,219	0/0:13,0:13:39.09:0,39,398	0/0:13,0:13:39.09:0,39,398	0/0:27,0:27:63.13:0,63,643	0/0:28,0:28:84.18:0,84,852	0/0:22,0:22:63.13:0,63,636	0/0:19,0:19:51.11:0,51,520	0/0:14,0:14:42.10:0,42,429	0/0:13,0:13:39.09:0,39,398	0/0:18,0:18:54.12:0,54,551	0/0:10,0:10:24.05:0,24,245	0/0:17,0:17:45.10:0,45,459	0/0:16,0:16:48.11:0,48,488	0/0:16,0:16:45.10:0,45,459	0/0:22,0:22:63.14:0,63,642	0/0:29,0:29:75.15:0,75,758	0/0:16,0:16:42.08:0,42,421	0/0:23,0:23:63.14:0,63,643	0/0:10,0:10:30.07:0,30,306	0/0:12,0:12:36.08:0,36,367	0/0:37,0:36:99:0,102,1030	0/0:10,0:10:27.06:0,27,275	0/0:18,0:18:54.12:0,54,550	0/0:14,0:14:42.10:0,42,429	./.
chr10	102626477	.	ACTCAGAAG	A	1939.30	PASS	AB=0.538;AC=3;AF=0.054;AN=56;BaseQRankSum=8.259;DP=638;FS=0.000;HRun=0;HaplotypeScore=164.6833;InbreedingCoeff=0.5865;MQ=94.55;MQ0=0;MQRankSum=-7.514;QD=57.04;ReadPosRankSum=0.617;VQSLOD=3.1887;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,5039	0/0:7,0:7:15.04:0,15,489	0/0:33,0:33:87.26:0,87,3431	0/0:27,0:27:72.21:0,72,2626	0/0:16,0:16:45.15:0,45,1967	0/0:16,0:16:45.15:0,45,1800	0/0:32,0:32:96.30:0,96,3910	0/0:23,0:23:60.20:0,60,2520	0/0:25,0:25:69.24:0,69,2930	0/0:18,0:18:54.18:0,54,2235	0/0:9,0:9:24.01:0,24,877	0/0:23,0:23:60.20:0,60,2520	0/0:22,0:22:66.23:0,66,2885	0/0:23,0:23:69.24:0,69,2856	0/0:31,0:31:93.31:0,93,3917	0/0:20,0:20:54.19:0,54,2321	0/0:40,0:40:99:0,102,4305	0/0:19,0:19:48.12:0,48,1793	0/0:20,0:20:48.15:0,48,1890	0/0:13,0:13:39.13:0,39,1691	0/0:37,0:37:96.33:0,96,4086	0/0:16,0:16:48.16:0,48,1906	0/0:14,0:14:39.12:0,39,1590	0/0:37,0:37:99:0,105,4559	0/0:16,0:16:42.14:0,42,1752	0/1:4,24:28:56.45:1787,0,56	0/0:26,0:26:75.23:0,75,2887	1/1:1,5:6:9.03:249,9,0
chr10	102626945	.	G	GC	17375.82	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-14.907;DP=670;FS=9.352;HRun=4;HaplotypeScore=61.9706;InbreedingCoeff=0.9941;MQ=72.83;MQ0=0;MQRankSum=-3.873;QD=35.17;ReadPosRankSum=4.907;VQSLOD=4.8751;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:31:78.26:1065,78,0	0/0:4,0:4:12.03:0,12,136	0/0:23,0:23:56.51:0,57,611	0/0:16,0:16:38.86:0,39,401	0/0:33,0:33:84.22:0,84,937	1/1:1,19:20:54.18:738,54,0	1/1:1,37:38:96.32:1313,96,0	1/1:3,22:25:63.16:805,63,0	1/1:1,26:27:75.25:1026,75,0	0/0:29,0:29:87.22:0,87,955	0/0:18,0:18:54.15:0,54,611	0/0:21,0:21:63.18:0,63,714	1/1:0,25:25:66.22:902,66,0	1/1:0,21:21:57.19:780,57,0	1/1:1,30:31:87.28:1179,87,0	0/0:32,0:31:90.21:0,90,989	1/1:2,23:25:63.21:862,63,0	1/1:3,29:32:81.27:1108,81,0	1/1:2,23:25:69.23:942,69,0	1/1:2,17:19:51.16:674,51,0	1/1:0,27:27:69.23:944,69,0	1/1:0,26:26:75.25:1024,75,0	1/1:2,16:18:36.12:490,36,0	1/1:1,27:28:72.24:985,72,0	1/1:2,26:28:63.21:861,63,0	1/1:3,18:21:51.17:694,51,0	1/1:0,20:19:50.83:697,51,0	1/1:0,7:7:21.07:287,21,0
chr10	102630166	.	TGGGGG	T	2627.83	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.645;DP=459;FS=15.666;HRun=12;HaplotypeScore=109.1704;InbreedingCoeff=0.8794;MQ=78.95;MQ0=0;MQRankSum=-10.287;QD=27.09;ReadPosRankSum=7.197;VQSLOD=0.2841;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:32.76:0,33,744	0/0:7,0:7:3.01:0,3,75	0/0:16,0:17:32.98:0,33,616	0/0:11,0:12:2.19:0,2,380	0/0:7,0:9:21.07:0,21,500	0/0:6,0:6:12.04:0,12,326	0/0:18,0:19:32.96:0,33,928	1/1:7,9:16:27.03:448,27,0	0/0:15,0:16:20.45:0,20,578	0/0:10,0:10:18.05:0,18,377	0/0:5,0:5:6.02:0,6,151	0/0:25,0:25:27.08:0,27,643	0/0:14,0:14:21.07:0,21,586	0/0:25,0:28:38.64:0,39,995	0/0:17,0:17:24.07:0,24,602	0/0:15,0:15:14.58:0,15,414	0/0:35,0:38:60.18:0,60,1526	0/0:23,0:24:46.04:0,46,1177	1/1:6,10:16:33.06:551,33,0	1/1:4,8:12:21.51:371,22,0	1/1:12,9:21:9.88:132,10,0	0/0:11,0:11:17.53:0,18,502	0/0:11,0:10:14.52:0,15,400	0/0:30,0:33:53.70:0,54,1478	0/0:13,0:13:23.58:0,24,631	1/1:4,10:14:9.91:528,10,0	1/1:0,12:12:27.08:470,27,0	1/1:1,5:6:18.06:317,18,0
chr10	102630398	.	G	GCAGAACAAAGAC	24887.05	PASS	AB=0.700;AC=39;AF=0.696;AN=56;BaseQRankSum=11.701;DP=550;FS=12.871;HRun=0;HaplotypeScore=215.4006;InbreedingCoeff=0.8967;MQ=76.30;MQ0=0;MQRankSum=-15.321;QD=65.32;ReadPosRankSum=-3.072;VQSLOD=2.9616;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:25:57.20:1681,57,0	0/0:9,0:9:27.09:0,27,954	0/0:23,0:22:39.11:0,39,1115	0/0:14,0:14:24.08:0,24,681	0/0:21,0:21:57.20:0,57,1910	1/1:20,0:16:39.13:1245,39,0	1/1:35,0:34:78.26:2254,78,0	1/1:20,0:20:51.18:1518,51,0	1/1:19,0:17:45.11:1292,45,0	0/0:23,0:23:57.18:0,57,1947	0/0:22,0:22:51.18:0,51,1778	0/0:38,0:38:96.30:0,96,3137	1/1:25,0:23:54.19:1604,54,0	1/1:17,0:16:36.12:1087,36,0	1/1:23,0:23:57.20:1719,57,0	0/0:19,0:19:42.14:0,42,1394	1/1:15,0:14:24.08:662,24,0	1/1:15,0:15:30.07:845,30,0	1/1:18,0:18:39.13:1097,39,0	1/1:20,0:20:39.13:1179,39,0	1/1:19,0:19:36.12:1056,36,0	1/1:23,0:23:54.19:1608,54,0	1/1:12,0:12:36.12:1050,36,0	1/1:20,0:18:18.06:534,18,0	1/1:18,0:18:48.16:1496,48,0	0/1:12,9:21:65.58:1924,0,66	1/1:11,0:11:24.08:746,24,0	1/1:2,1:3:6.02:289,6,0
chr10	102630407	.	AGACG	A	3476.76	PASS	AB=0.832;AC=15;AF=0.268;AN=56;BaseQRankSum=-1.470;DP=520;FS=5.034;HRun=0;HaplotypeScore=179.3764;InbreedingCoeff=-0.3763;MQ=75.35;MQ0=0;MQRankSum=-5.702;QD=12.03;ReadPosRankSum=-8.185;VQSLOD=-0.2500;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:25,4:27:99:266,0,216	0/0:11,0:11:33.11:0,33,886	0/0:22,0:21:54.02:0,54,1262	0/0:14,0:14:31.35:0,31,760	0/0:22,0:22:63.22:0,63,1723	0/1:15,4:15:99:176,0,222	0/1:27,4:30:99:321,0,269	0/1:11,9:20:90.13:419,0,90	0/1:15,4:17:99:180,0,216	0/0:22,0:22:63.21:0,63,1621	0/0:18,0:18:51.18:0,51,1391	0/0:38,0:38:99:0,111,2843	0/1:19,4:21:99:229,0,219	0/1:12,5:16:99:359,0,156	0/1:14,7:21:99:336,0,229	0/0:19,0:19:57.20:0,57,1548	0/1:14,0:13:37.15:37,0,135	0/0:13,1:14:6.29:0,6,156	0/1:11,6:17:99:201,0,127	0/1:13,4:17:92.23:183,0,92	0/1:15,1:16:87.69:88,0,110	0/1:16,6:22:99:332,0,175	0/1:11,1:12:84.14:84,0,160	0/0:15,1:14:18.23:0,18,123	0/0:17,0:17:44.69:0,45,351	0/0:15,0:15:39.13:0,39,883	0/1:9,3:12:29.49:264,0,29	0/0:3,0:3:9.03:0,9,222
chr10	102630409	.	A	AC	3998.76	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=15.269;DP=512;FS=15.483;HRun=1;HaplotypeScore=170.9953;InbreedingCoeff=0.4756;MQ=74.18;MQ0=0;MQRankSum=-13.299;QD=11.56;ReadPosRankSum=4.016;VQSLOD=0.7872;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,2:26:23.90:366,24,0	0/0:11,0:11:33.11:0,33,427	0/0:22,0:21:29.77:0,30,611	0/0:12,0:12:32.46:0,32,387	0/0:22,0:22:63.20:0,63,815	1/1:21,0:17:4.01:158,4,0	1/1:29,1:29:21.75:425,22,0	0/1:23,0:23:41.70:163,0,42	1/1:19,0:17:12.88:213,13,0	0/0:21,0:21:60.18:0,60,762	0/0:17,0:17:51.17:0,51,662	0/0:38,0:38:99:0,105,1345	1/1:22,0:20:4.76:212,5,0	0/1:18,0:17:11.87:117,0,12	0/1:21,0:21:6.04:197,0,6	0/0:20,0:20:57.14:0,57,721	1/1:10,1:10:18.76:170,19,0	1/1:11,2:13:29.40:201,29,0	1/1:14,3:17:9.47:267,9,0	1/1:15,1:16:0.25:265,0,0	1/1:14,0:14:23.83:232,24,0	0/1:23,0:23:16.68:259,0,17	1/1:12,0:12:19.94:167,20,0	1/1:15,0:13:19.91:166,20,0	1/1:17,0:17:47.24:304,47,0	0/1:14,0:14:41.54:42,0,199	0/1:12,0:12:11.95:75,0,12	0/0:3,0:3:2.72:0,3,73
chr10	102630410	.	C	CCA	7198.53	PASS	AB=0.828;AC=34;AF=0.607;AN=56;BaseQRankSum=15.421;DP=474;FS=3.697;HRun=0;HaplotypeScore=145.7773;InbreedingCoeff=0.5857;MQ=76.82;MQ0=0;MQRankSum=-13.293;QD=23.00;ReadPosRankSum=2.142;VQSLOD=5.7062;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,14:22:52.99:559,53,0	0/0:12,0:12:33.11:0,33,537	0/0:21,0:21:54.78:0,55,807	0/0:12,0:12:33.11:0,33,517	0/0:22,0:22:63.22:0,63,1027	1/1:8,14:18:27.62:474,28,0	1/1:6,18:23:58.57:750,59,0	0/1:15,4:19:79.36:161,0,79	1/1:6,11:15:16.09:405,16,0	0/0:20,0:20:60.19:0,60,953	0/0:17,0:17:51.17:0,51,827	0/0:36,0:36:99:0,105,1699	1/1:6,13:18:36.23:546,36,0	0/1:9,9:17:43.90:286,0,44	1/1:8,12:20:16.72:518,17,0	0/0:20,0:20:57.19:0,57,924	1/1:4,5:8:13.81:225,14,0	1/1:5,8:13:30.06:395,30,0	0/1:9,5:14:6.10:300,0,6	1/1:7,6:13:30.60:386,31,0	1/1:3,7:10:13.66:260,14,0	1/1:11,8:21:41.11:494,41,0	1/1:1,10:11:9.43:349,9,0	1/1:6,8:12:20.80:267,21,0	1/1:1,13:14:39.13:545,39,0	0/1:13,0:13:88.93:89,0,253	0/1:9,5:14:1.26:181,0,1	0/1:3,0:3:9.18:9,0,89
chr10	102630411	.	G	GAACAAA	18377.54	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=13.705;DP=483;FS=6.509;HRun=0;HaplotypeScore=139.5643;InbreedingCoeff=0.8338;MQ=77.89;MQ0=0;MQRankSum=-14.531;QD=57.25;ReadPosRankSum=-0.721;VQSLOD=4.7984;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,14:23:52.56:1253,53,0	0/0:12,0:12:33.11:0,33,833	0/0:22,0:21:56.27:0,56,1152	0/0:14,0:14:31.35:0,31,681	0/0:22,0:22:63.22:0,63,1546	1/1:8,14:18:30.17:1210,30,0	1/1:5,18:22:64.46:1719,64,0	1/1:15,4:19:50.70:788,51,0	1/1:7,11:16:45.12:1136,45,0	0/0:19,0:19:57.20:0,57,1450	0/0:17,0:17:51.18:0,51,1290	0/0:36,0:36:99:0,105,2558	1/1:7,13:19:53.77:1393,54,0	1/1:9,9:17:44.79:985,45,0	1/1:8,11:20:56.34:1379,56,0	0/0:20,0:20:57.18:0,57,1408	1/1:4,5:8:19.88:525,20,0	1/1:5,7:13:26.45:717,26,0	1/1:10,5:15:38.25:747,38,0	1/1:7,6:13:35.07:768,35,0	1/1:5,7:12:33.11:902,33,0	1/1:12,9:21:57.66:1316,58,0	1/1:2,10:12:33.07:906,33,0	1/1:6,8:12:17.64:413,18,0	1/1:1,13:14:39.13:1218,39,0	0/1:13,0:13:99:220,0,389	1/1:11,5:16:33.06:756,33,0	0/1:3,0:3:27.78:28,0,143
chr10	102630485	.	C	CAG	1443.18	PASS	AB=1.000;AC=39;AF=0.722;AN=54;BaseQRankSum=4.713;DP=581;FS=5.357;HRun=0;HaplotypeScore=106.5973;InbreedingCoeff=0.6059;MQ=64.42;MQ0=41;MQRankSum=-5.370;QD=3.65;ReadPosRankSum=-1.281;VQSLOD=2.1473;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:29:5.55:28,6,0	0/0:5,0:5:5.99:0,6,57	0/0:41,0:24:20.11:0,20,229	0/0:58,0:24:22.80:0,23,172	0/0:18,0:18:39.09:0,39,437	1/1:20,0:16:3:26,3,0	1/1:24,0:23:9:78,9,0	1/1:32,0:29:28.59:181,29,0	1/1:18,0:18:3:26,3,0	0/0:13,0:12:12.02:0,12,132	0/0:11,0:10:12.02:0,12,128	0/0:26,0:26:48.14:0,48,560	1/1:24,0:22:21.99:129,22,0	1/1:22,0:21:3:26,3,0	0/1:21,0:15:0.43:1,0,0	1/1:13,19:32:0.37:490,0,0	1/1:9,0:9:10.59:54,11,0	1/1:10,0:8:8.45:54,8,0	1/1:13,0:11:12.82:84,13,0	1/1:13,0:9:2.50:9,2,0	1/1:20,0:19:6:52,6,0	1/1:24,0:24:2.60:10,3,0	1/1:13,0:12:8.29:43,8,0	./.	1/1:7,0:5:2.88:15,3,0	1/1:27,0:22:0.37:137,0,0	1/1:29,0:28:22.91:161,23,0	1/1:4,0:4:3.38:11,3,0
chr10	102630505	.	G	GAGAGA	5280.98	PASS	AB=0.545;AC=39;AF=0.696;AN=56;BaseQRankSum=-2.884;DP=645;FS=40.588;HRun=0;HaplotypeScore=88.2960;InbreedingCoeff=0.7342;MQ=56.77;MQ0=87;MQRankSum=-5.720;QD=12.82;ReadPosRankSum=1.116;VQSLOD=1.8849;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:25:5.63:137,6,0	0/0:4,0:4:9:0,9,102	0/0:50,0:20:21.15:0,21,418	0/0:80,0:28:50.70:0,51,532	0/0:19,0:19:57.17:0,57,933	1/1:1,2:20:3.01:53,3,0	1/1:3,0:19:12.04:215,12,0	1/1:3,0:24:60.17:914,60,0	1/1:2,0:20:3.01:49,3,0	0/0:17,0:16:48.13:0,48,590	0/0:11,0:9:18.06:0,18,309	0/0:23,0:25:66.22:0,66,1161	1/1:1,0:18:29.88:532,30,0	1/1:4,20:21:3.01:99,3,0	1/1:3,0:11:5.57:86,6,0	0/0:26,0:26:46.89:0,47,399	1/1:2,1:9:12.04:268,12,0	1/1:1,0:14:9.03:183,9,0	1/1:5,0:17:45.12:584,45,0	1/1:4,0:9:8.66:104,9,0	1/1:4,0:18:6.02:123,6,0	1/1:1,0:18:3.17:74,3,0	1/1:1,0:16:8.71:176,9,0	0/1:3,0:14:0:0,0,0	1/1:3,0:9:6.02:101,6,0	1/1:13,0:20:4.88:861,5,0	1/1:2,0:21:27.98:567,28,0	1/1:4,0:6:12:156,12,0
chr10	102630590	.	C	CTTT	2199.79	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.487;DP=660;FS=1.340;HRun=3;HaplotypeScore=106.9362;InbreedingCoeff=0.9957;MQ=82.85;MQ0=16;MQRankSum=-2.933;QD=59.45;ReadPosRankSum=0.181;VQSLOD=3.0634;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:35:93.31:0,93,1486	0/0:6,0:6:18.06:0,18,287	0/0:27,0:27:38.45:0,38,980	0/0:27,0:27:73.13:0,73,1135	0/0:21,0:21:63.21:0,63,1003	0/0:23,0:23:57.19:0,57,911	0/0:31,0:31:84.27:0,84,1310	0/0:37,0:37:99:0,102,1561	0/0:22,0:21:54.18:0,54,855	0/0:25,0:25:72.24:0,72,1130	0/0:12,0:12:36.12:0,36,573	0/0:21,0:21:63.21:0,63,1008	0/0:29,0:29:78.02:0,78,1225	0/0:16,0:13:39.13:0,39,624	0/0:26,0:26:78.27:0,78,1237	0/0:20,0:20:57.19:0,57,912	0/0:29,0:27:75.19:0,75,1146	0/0:18,0:18:39.13:0,39,624	0/0:23,0:23:60.20:0,60,956	0/0:26,0:24:63.21:0,63,1004	0/0:24,0:23:69.24:0,69,1104	0/0:22,0:21:63.21:0,63,1007	0/0:17,0:17:45.15:0,45,717	0/0:39,0:37:90.31:0,90,1435	0/0:18,0:18:54.17:0,54,841	1/1:2,21:24:69.18:1444,69,0	0/0:24,0:24:69.24:0,69,1103	1/1:0,12:13:39.13:877,39,0
chr10	102631047	.	C	CCTCT	2897.42	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-4.929;DP=521;FS=2.980;HRun=0;HaplotypeScore=97.2482;InbreedingCoeff=0.9799;MQ=92.08;MQ0=3;MQRankSum=-2.372;QD=43.25;ReadPosRankSum=-0.346;VQSLOD=3.6990;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:68.82:0,69,1128	0/0:7,0:7:18.06:0,18,309	0/0:23,0:23:39.06:0,39,573	0/0:32,0:32:61.98:0,62,1077	0/0:21,0:21:60.19:0,60,995	0/0:16,0:16:39.13:0,39,666	0/0:25,0:25:66.22:0,66,1112	1/1:3,6:9:18.06:416,18,0	0/0:9,0:9:12.04:0,12,199	0/0:20,0:20:51.16:0,51,844	0/0:15,0:15:42.14:0,42,721	0/0:20,0:20:40.50:0,41,824	0/0:13,0:13:30.10:0,30,512	0/0:11,0:10:24.08:0,24,412	0/0:24,0:24:51.12:0,51,849	0/0:14,0:14:33.11:0,33,563	0/0:47,0:47:90.24:0,90,1467	0/0:19,0:19:30.10:0,30,515	1/1:6,4:10:21.06:460,21,0	1/1:6,13:21:39.13:978,39,0	1/1:6,11:18:32.90:763,33,0	0/0:17,0:17:24.08:0,24,412	0/0:10,0:10:15.04:0,15,213	0/0:33,0:33:78.27:0,78,1316	0/0:12,0:12:24.08:0,24,404	0/0:17,0:17:36.12:0,36,618	1/1:3,5:9:18.06:453,18,0	0/0:12,0:12:21.07:0,21,360
chr10	102631087	.	C	CCACACACACA	5317.41	PASS	AB=0.850;AC=38;AF=0.731;AN=52;BaseQRankSum=-2.411;DP=587;FS=0.000;HRun=0;HaplotypeScore=145.3814;InbreedingCoeff=0.5906;MQ=64.10;MQ0=31;MQRankSum=-2.028;QD=11.61;ReadPosRankSum=-2.119;VQSLOD=3.4789;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:35:18.06:377,18,0	0/0:4,0:4:3:0,3,28	./.	0/1:47,0:18:0:0,0,0	0/0:13,0:16:27.09:0,27,665	0/1:11,5:20:64.11:142,0,64	1/1:24,0:32:27.98:745,28,0	1/1:16,0:20:24.08:521,24,0	1/1:6,0:11:5.52:227,6,0	0/0:15,0:14:15.04:0,15,234	0/0:8,0:8:3.01:0,3,89	0/0:25,0:25:26.86:0,27,734	1/1:10,4:17:5.98:168,6,0	1/1:8,0:11:9:118,9,0	1/1:15,0:23:3.01:90,3,0	0/0:12,0:13:21.07:0,21,541	1/1:27,11:46:9.03:387,9,0	1/1:10,0:20:5.61:101,6,0	1/1:14,0:16:17.49:317,17,0	1/1:10,0:9:12.04:258,12,0	1/1:23,0:28:17.52:510,18,0	1/1:8,5:13:3.01:148,3,0	./.	1/1:24,4:37:2.68:149,3,0	1/1:10,0:16:10.76:271,11,0	1/1:17,0:16:18.95:355,19,0	1/1:12,0:11:6.91:246,7,0	1/1:7,0:8:6.02:185,6,0
chr10	102631341	.	G	GA	5720.96	PASS	AB=0.583;AC=29;AF=0.518;AN=56;BaseQRankSum=10.810;DP=452;FS=0.362;HRun=0;HaplotypeScore=113.0968;InbreedingCoeff=0.8929;MQ=78.39;MQ0=0;MQRankSum=-13.844;QD=26.61;ReadPosRankSum=2.826;VQSLOD=5.4229;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,12:18:17.34:411,17,0	0/0:6,0:6:18.05:0,18,235	0/0:17,0:16:34.78:0,35,517	0/0:27,0:26:44.40:0,44,694	0/0:24,0:24:72.23:0,72,976	1/1:5,17:22:46.67:622,47,0	1/1:5,7:12:19.31:273,19,0	0/0:35,0:35:11.56:0,12,239	1/1:4,6:10:18.88:260,19,0	0/0:19,0:19:57.18:0,57,770	0/0:15,0:15:45.13:0,45,592	0/0:14,0:14:42.09:0,42,546	0/1:2,5:7:28.39:156,0,28	1/1:2,12:14:35.64:433,36,0	1/1:1,16:17:46.05:554,46,0	0/0:16,0:16:48.15:0,48,655	1/1:8,17:25:48.11:628,48,0	1/1:2,9:11:30.03:337,30,0	0/0:18,0:18:41.79:0,42,174	0/0:18,0:18:17.52:0,18,201	0/0:4,0:4:11.07:0,11,50	1/1:4,15:19:6.42:436,6,0	1/1:5,17:21:40.79:539,41,0	1/1:1,5:6:18.03:199,18,0	1/1:3,8:11:26.85:290,27,0	1/1:4,7:12:10.65:265,11,0	0/0:24,0:24:63.42:0,63,319	1/1:0,9:9:27.05:317,27,0
chr10	102631343	.	G	GAAA	8558.15	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=10.802;DP=463;FS=2.987;HRun=5;HaplotypeScore=125.3981;InbreedingCoeff=0.6811;MQ=76.40;MQ0=0;MQRankSum=-9.820;QD=24.95;ReadPosRankSum=-2.991;VQSLOD=1.0532;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:18,1:19:42.39:592,42,0	0/0:6,0:6:18.06:0,18,265	0/1:17,0:16:2.47:2,0,393	0/0:24,0:24:36.88:0,37,628	0/0:25,0:25:60.19:0,60,876	1/1:22,2:24:66.19:894,66,0	1/1:12,0:12:30.04:393,30,0	1/1:34,0:34:48.97:218,49,0	1/1:10,0:10:22.62:274,23,0	0/0:20,0:20:48.15:0,48,707	0/0:15,0:15:33.10:0,33,486	0/0:14,0:14:36.12:0,36,528	0/1:7,0:7:26.17:166,0,26	1/1:17,0:17:49.68:696,50,0	1/1:17,0:17:48.16:676,48,0	0/0:15,0:15:39.13:0,39,575	1/1:21,4:25:66.20:950,66,0	1/1:10,1:11:30.08:421,30,0	1/1:18,0:18:30.20:190,30,0	0/1:18,0:18:43.52:111,0,44	1/1:4,0:4:0.74:3,1,0	1/1:20,0:20:50.97:594,51,0	1/1:21,0:20:49.68:627,50,0	1/1:5,1:6:18.06:260,18,0	1/1:14,1:15:40.64:532,41,0	1/1:14,0:14:34.65:477,35,0	0/1:25,0:25:21.04:21,0,40	1/1:9,0:9:27.09:462,27,0
chr10	102631363	.	A	AT	5959.15	PASS	AB=0.643;AC=25;AF=0.446;AN=56;BaseQRankSum=6.710;DP=441;FS=0.000;HRun=6;HaplotypeScore=93.9263;InbreedingCoeff=0.9419;MQ=70.83;MQ0=0;MQRankSum=-11.040;QD=31.36;ReadPosRankSum=3.352;VQSLOD=4.7794;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:48.15:599,48,0	0/0:6,0:6:18.04:0,18,184	0/0:11,0:11:29.83:0,30,271	0/0:16,0:16:34.17:0,34,331	0/0:22,0:22:66.15:0,66,673	1/1:1,19:20:54.17:679,54,0	1/1:2,10:12:30.10:377,30,0	0/0:28,0:28:84.17:0,84,846	1/1:0,10:10:27.09:339,27,0	0/0:24,0:24:60.13:0,60,612	0/0:11,0:11:27.06:0,27,275	0/0:12,0:12:36.08:0,36,367	0/1:4,5:9:3.52:273,0,4	1/1:3,13:16:39.12:490,39,0	1/1:0,12:12:36.12:452,36,0	0/0:15,0:15:45.08:0,45,452	1/1:5,21:26:57.17:698,57,0	1/1:1,8:9:27.09:339,27,0	0/0:26,0:26:60.09:0,60,593	0/0:19,0:19:57.13:0,57,581	0/0:4,0:4:12.03:0,12,122	1/1:2,13:15:42.13:528,42,0	1/1:2,13:14:36.05:429,36,0	1/1:1,8:9:15.01:171,15,0	1/1:1,17:18:48.09:584,48,0	0/0:15,0:15:39.09:0,39,398	0/0:24,0:24:72.16:0,72,734	0/0:17,0:17:51.11:0,51,520
chr10	102631816	.	CGT	C	12963.19	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=11.512;DP=708;FS=2.437;HRun=0;HaplotypeScore=166.8476;InbreedingCoeff=0.9077;MQ=53.72;MQ0=4;MQRankSum=0.365;QD=25.77;ReadPosRankSum=2.202;VQSLOD=5.7374;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,27:33:53.62:736,54,0	0/1:12,0:11:10.06:10,0,440	0/0:24,0:15:35.57:0,36,499	0/0:28,0:16:39.03:0,39,608	0/0:19,0:19:51.16:0,51,843	1/1:0,18:18:38.64:534,39,0	1/1:10,24:34:63.02:862,63,0	1/1:11,9:18:6.12:359,6,0	1/1:2,26:28:66.22:904,66,0	0/0:39,0:39:99:0,108,1880	0/0:14,0:14:33.11:0,33,575	0/0:29,0:29:81.26:0,81,1386	1/1:2,23:25:66.22:895,66,0	1/1:5,29:34:81.07:1091,81,0	1/1:1,28:29:66.22:904,66,0	0/0:20,0:20:60.13:0,60,955	1/1:6,35:38:99:1357,99,0	1/1:2,24:25:72.20:966,72,0	1/1:6,14:18:41.35:533,41,0	1/1:3,15:18:24.08:329,24,0	1/1:17,20:37:27.09:367,27,0	1/1:2,16:17:30.05:411,30,0	1/1:1,10:11:21.07:287,21,0	1/1:14,42:56:99:1517,114,0	1/1:2,20:22:38.50:531,39,0	0/0:25,0:25:60.18:0,60,975	1/1:10,10:20:27.56:369,28,0	0/0:6,0:6:13.55:0,14,181
chr10	102631845	.	A	ATGTGTGTG	1343.45	PASS	AB=1.000;AC=18;AF=0.333;AN=54;BaseQRankSum=-1.564;DP=705;FS=10.284;HRun=0;HaplotypeScore=290.2008;InbreedingCoeff=0.4347;MQ=46.94;MQ0=9;MQRankSum=-2.795;QD=4.62;ReadPosRankSum=-4.318;VQSLOD=0.4585;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:36.01:0,36,420	0/0:14,0:13:33.02:0,33,600	./.	0/1:21,0:8:18.92:19,0,26	0/0:17,0:17:36.01:0,36,678	0/1:16,0:16:9.49:9,0,134	0/0:34,0:34:11.57:0,12,243	1/1:16,0:13:22.15:188,22,0	0/0:28,0:28:44.83:0,45,548	0/0:37,0:36:84.08:0,84,1542	0/0:14,0:14:30.10:0,30,715	0/0:31,0:31:65.76:0,66,1370	0/0:27,0:27:51.11:0,51,733	0/0:38,0:38:9.56:0,10,590	0/0:19,0:19:30.30:0,30,370	0/0:20,0:20:57.12:0,57,1274	0/1:46,0:44:10.13:10,0,619	0/0:26,0:26:25.42:0,25,523	1/1:28,0:25:29.66:259,30,0	1/1:17,0:16:2.99:24,3,0	1/1:38,0:37:3:25,3,0	0/0:19,0:19:14.78:0,15,170	0/1:15,0:15:4.97:5,0,178	0/1:46,0:46:2.21:2,0,442	0/0:25,0:25:21.90:0,22,303	0/1:27,0:27:14.96:506,0,15	1/1:13,0:13:2.68:41,3,0	1/1:0,8:8:12.04:424,12,0
chr10	102631860	.	TGCGC	T	5677.02	PASS	AB=0.964;AC=30;AF=0.536;AN=56;BaseQRankSum=8.215;DP=645;FS=2.332;HRun=0;HaplotypeScore=202.4336;InbreedingCoeff=0.7628;MQ=52.72;MQ0=6;MQRankSum=-5.403;QD=13.45;ReadPosRankSum=2.500;VQSLOD=4.5446;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,25:41:26.31:455,26,0	0/0:12,0:11:21.07:0,21,525	0/0:10,0:2:5.03:0,5,28	0/1:12,0:7:6.34:12,0,6	0/0:13,0:13:33.07:0,33,773	1/1:5,7:13:14.79:234,15,0	1/1:10,21:33:11.42:205,11,0	0/0:19,0:16:5.36:0,5,59	1/1:11,21:33:39.12:626,39,0	0/0:32,0:32:45.14:0,45,1004	0/0:14,0:14:30.10:0,30,621	0/0:28,0:29:53.97:0,54,1118	1/1:7,19:30:51.63:794,52,0	1/1:11,22:36:45.15:772,45,0	1/1:8,11:19:21.07:344,21,0	0/0:22,0:21:54.14:0,54,1114	1/1:16,21:35:42.14:706,42,0	1/1:6,18:24:39.08:604,39,0	0/0:24,0:21:1.69:0,2,68	0/0:12,0:11:2.46:0,2,15	0/1:35,0:34:0.08:0,0,2	1/1:4,11:16:5.80:76,6,0	1/1:6,10:17:9.03:154,9,0	1/1:15,25:42:20.16:360,20,0	1/1:8,14:23:21.06:329,21,0	0/0:6,0:29:38.74:0,39,521	1/1:10,0:10:1.51:5,2,0	0/0:7,0:7:9:0,9,98
chr10	102632037	.	C	CTTTG	25647.24	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-12.954;DP=706;FS=14.189;HRun=0;HaplotypeScore=99.0169;InbreedingCoeff=0.9728;MQ=68.36;MQ0=4;MQRankSum=-10.928;QD=51.40;ReadPosRankSum=3.244;VQSLOD=5.1539;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,36:45:99:2377,99,0	0/0:11,0:11:33.11:0,33,607	0/0:35,0:28:45.68:0,46,1051	0/0:49,0:40:75.31:0,75,1413	0/0:21,0:21:54.18:0,54,993	1/1:2,15:18:36.12:907,36,0	1/1:5,31:38:66.14:1547,66,0	1/1:10,20:30:66.21:1594,66,0	1/1:5,24:31:66.10:1459,66,0	0/0:27,0:27:78.27:0,78,1432	0/0:9,0:9:21.06:0,21,386	0/0:30,0:30:84.27:0,84,1501	1/1:3,27:31:57.20:1499,57,0	1/1:5,23:28:48.16:1181,48,0	1/1:2,24:28:60.21:1575,60,0	0/0:25,0:25:75.24:0,75,1349	1/1:4,30:35:69.19:1738,69,0	1/1:0,13:14:33.11:853,33,0	1/1:7,18:25:60.19:1384,60,0	1/1:5,15:20:51.12:1217,51,0	1/1:3,20:23:54.19:1420,54,0	1/1:5,22:26:57.04:1245,57,0	1/1:1,8:9:24.08:632,24,0	1/1:2,28:30:63.17:1560,63,0	1/1:3,13:17:45.07:966,45,0	1/1:3,18:22:4.96:1312,5,0	1/1:1,19:20:33.11:871,33,0	1/1:0,4:6:12.04:309,12,0
chr10	102633099	.	A	AT	20452.53	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=14.069;DP=705;FS=4.602;HRun=1;HaplotypeScore=115.8759;InbreedingCoeff=0.9991;MQ=86.94;MQ0=0;MQRankSum=-7.027;QD=41.15;ReadPosRankSum=2.541;VQSLOD=4.5140;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,48:51:99:1998,135,0	0/0:11,0:11:33.11:0,33,424	0/0:26,0:26:37.93:0,38,884	0/0:25,0:26:34.41:0,34,780	0/0:19,0:19:57.18:0,57,735	1/1:2,30:31:84.28:1259,84,0	1/1:0,29:29:87.29:1304,87,0	1/1:0,19:19:54.18:807,54,0	1/1:0,29:29:84.28:1259,84,0	0/0:28,0:28:81.26:0,81,1041	0/0:7,0:7:21.05:0,21,258	0/0:34,0:34:99:0,102,1324	1/1:1,23:24:69.23:1033,69,0	1/1:0,26:26:72.24:1079,72,0	1/1:1,25:26:75.25:1124,75,0	0/0:24,0:24:72.23:0,72,935	1/1:1,41:42:99:1799,120,0	1/1:0,21:21:63.21:940,63,0	1/1:2,21:23:66.22:980,66,0	1/1:0,22:22:63.21:944,63,0	1/1:3,45:48:99:1844,123,0	1/1:1,19:20:42.14:629,42,0	1/1:1,17:18:45.15:674,45,0	1/1:0,33:33:87.29:1304,87,0	1/1:1,12:13:36.12:540,36,0	0/0:23,0:23:66.21:0,66,844	1/1:1,20:21:63.21:936,63,0	0/0:10,0:10:27.09:0,27,350
chr10	102635380	.	ATG	A	2136.28	PASS	AB=0.923;AC=11;AF=0.196;AN=56;BaseQRankSum=0.226;DP=500;FS=0.496;HRun=0;HaplotypeScore=100.4379;InbreedingCoeff=0.8997;MQ=62.76;MQ0=1;MQRankSum=0.691;QD=22.97;ReadPosRankSum=-1.385;VQSLOD=3.6198;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:51.12:0,51,769	0/0:6,0:6:18.06:0,18,299	0/0:11,0:9:21.01:0,21,233	0/0:16,0:12:13.47:0,13,188	0/0:34,0:34:96.28:0,96,1509	0/0:22,1:23:22.50:0,22,852	0/0:17,0:17:39.12:0,39,623	1/1:11,17:28:69.21:848,69,0	0/0:12,0:12:36.12:0,36,594	0/0:31,1:32:40.36:0,40,1134	0/0:27,0:27:78.22:0,78,1262	0/0:10,0:10:27.08:0,27,415	0/0:25,0:25:72.18:0,72,1108	0/0:13,0:13:33.10:0,33,523	0/0:17,0:17:42.10:0,42,623	0/0:15,0:15:33.09:0,33,499	0/0:22,1:22:41.48:0,41,619	0/0:19,0:19:36.07:0,36,543	1/1:9,14:23:57.12:666,57,0	1/1:1,6:8:18.06:226,18,0	1/1:3,8:11:18.02:212,18,0	0/0:8,0:8:21.06:0,21,321	0/0:26,1:27:24.54:0,25,837	0/0:8,0:8:20.95:0,21,299	0/0:23,0:23:60.19:0,60,967	0/0:18,0:18:51.15:0,51,776	1/1:2,8:11:29.93:354,30,0	0/1:11,1:12:4.72:5,0,465
chr10	102635418	.	A	ATGTG	16696.89	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-7.528;DP=583;FS=2.086;HRun=0;HaplotypeScore=101.1789;InbreedingCoeff=0.9309;MQ=69.22;MQ0=1;MQRankSum=-3.368;QD=44.53;ReadPosRankSum=2.582;VQSLOD=5.5497;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,18:24:53.52:1376,54,0	0/0:7,0:7:18.06:0,18,309	0/0:20,0:18:29.69:0,30,492	0/0:21,0:20:34.90:0,35,533	0/0:36,0:36:99:0,99,1734	1/1:2,22:26:72.03:1762,72,0	1/1:6,13:20:35.91:854,36,0	1/1:9,0:25:1.17:207,1,0	1/1:1,13:14:39.13:993,39,0	0/0:33,0:33:90.27:0,90,1546	0/0:28,0:28:72.16:0,72,1175	0/0:16,0:16:45.10:0,45,669	1/1:10,21:31:78.22:1798,78,0	1/1:4,12:17:33.11:838,33,0	1/1:0,22:23:63:1545,63,0	0/0:14,0:14:39.13:0,39,674	1/1:1,27:28:56.98:1390,57,0	1/1:3,15:18:39.13:995,39,0	1/1:7,0:24:0.97:184,1,0	1/1:1,0:12:30.78:140,31,0	1/1:3,0:22:27.67:127,28,0	1/1:0,12:12:24.08:612,24,0	1/1:3,22:25:54.19:1377,54,0	1/1:2,15:17:42.14:1070,42,0	1/1:2,19:22:51.18:1301,51,0	0/0:21,0:21:45.11:0,45,756	1/1:2,0:14:27.98:127,28,0	0/0:12,0:12:33.11:0,33,578
chr10	102635818	.	CCA	C	159.83	PASS	AB=0.917;AC=9;AF=0.188;AN=48;BaseQRankSum=1.016;DP=448;FS=17.190;HRun=0;HaplotypeScore=84.9645;InbreedingCoeff=0.4812;MQ=68.43;MQ0=10;MQRankSum=2.371;QD=2.08;ReadPosRankSum=1.847;VQSLOD=0.6282;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:27:9:0,9,91	0/0:4,0:4:8.75:0,9,75	./.	0/0:21,0:16:2.98:0,3,22	0/0:7,0:7:15.05:0,15,201	0/0:10,0:13:9:0,9,78	0/0:23,0:30:9.02:0,9,101	./.	0/0:14,0:22:20.33:0,20,159	0/0:6,0:6:3.01:0,3,35	./.	0/0:9,0:9:18.06:0,18,247	0/0:3,0:14:8.87:0,9,67	0/0:12,0:14:5.60:0,6,36	0/0:10,0:19:11.49:0,11,86	0/1:10,1:11:12.64:13,0,184	0/0:18,0:22:11.52:0,12,78	0/0:14,0:19:8.93:0,9,66	1/1:4,0:6:5.80:39,6,0	./.	1/1:22,17:38:14.82:152,15,0	1/1:7,0:12:0.21:1,0,0	0/0:6,0:9:5.45:0,5,35	0/0:29,0:39:11.97:0,12,107	0/0:10,0:10:3:0,3,26	0/0:6,0:7:7.77:0,8,56	1/1:5,2:9:8.86:80,9,0	0/0:6,0:10:21.02:0,21,220
chr10	102635912	.	A	AT	334.55	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=-0.625;DP=260;FS=0.000;HRun=8;HaplotypeScore=58.5806;InbreedingCoeff=0.7981;MQ=78.38;MQ0=0;MQRankSum=-1.638;QD=22.30;ReadPosRankSum=0.709;VQSLOD=3.8391;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:24.01:0,24,219	./.	0/0:14,0:14:13.11:0,13,205	0/0:18,0:17:34.78:0,35,288	0/0:6,0:6:18.01:0,18,165	0/0:6,0:6:18.01:0,18,165	0/0:6,0:6:15.01:0,15,137	0/0:23,0:23:54.02:0,54,494	0/0:5,0:6:14.04:0,14,116	0/0:14,0:14:33:0,33,299	0/0:2,0:2:3:0,3,27	0/0:5,0:5:12.01:0,12,110	0/0:8,0:8:14.98:0,15,128	0/0:9,0:9:24.01:0,24,220	0/0:7,0:7:11.99:0,12,105	0/0:7,0:7:12:0,12,110	0/0:6,0:6:18.01:0,18,165	0/0:8,0:8:18.01:0,18,164	0/0:8,0:8:24.01:0,24,220	0/0:5,0:5:15.01:0,15,137	0/0:17,0:17:32.68:0,33,302	0/0:12,0:12:26.85:0,27,247	0/0:13,0:14:29.04:0,29,253	0/0:11,0:10:14.99:0,15,137	0/0:12,0:12:27.01:0,27,247	1/1:1,9:10:27.08:311,27,0	0/0:10,0:10:18.01:0,18,165	1/1:1,4:5:12.04:138,12,0
chr10	102637189	.	GAA	G	18822.28	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=17.024;DP=626;FS=4.848;HRun=2;HaplotypeScore=158.4806;InbreedingCoeff=0.9989;MQ=81.60;MQ0=0;MQRankSum=-13.299;QD=43.07;ReadPosRankSum=4.113;VQSLOD=4.8558;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:93.31:1494,93,0	0/0:7,0:7:21.07:0,21,427	0/0:24,0:24:72.23:0,72,1368	0/0:24,0:24:72.25:0,72,1441	0/0:12,0:12:36.12:0,36,717	1/1:0,19:19:57.19:929,57,0	1/1:0,24:24:66.18:1045,66,0	1/1:0,21:21:60.14:876,60,0	1/1:0,17:17:42.14:684,42,0	0/0:33,0:33:93.27:0,93,1889	0/0:8,0:8:24.08:0,24,472	0/0:19,0:19:57.18:0,57,1108	1/1:0,32:32:89.95:1428,90,0	1/1:0,20:20:54.14:851,54,0	1/1:0,29:29:84.29:1369,84,0	0/0:25,0:25:75.26:0,75,1502	1/1:0,35:35:99:1615,99,0	1/1:0,11:11:33.11:538,33,0	1/1:0,19:19:54.16:834,54,0	1/1:0,19:19:48.16:783,48,0	1/1:1,43:44:99:1732,108,0	1/1:0,23:23:54.18:880,54,0	1/1:0,11:11:30.10:489,30,0	1/1:0,35:35:93.29:1515,93,0	1/1:0,21:21:51.17:832,51,0	0/0:25,0:25:75.25:0,75,1492	1/1:0,19:19:57.19:929,57,0	0/0:12,0:12:36.12:0,36,731
chr10	102637358	.	ATCCAATCCAC	A	5273.27	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=1.548;DP=585;FS=6.885;HRun=0;HaplotypeScore=300.9891;InbreedingCoeff=0.9092;MQ=88.75;MQ0=0;MQRankSum=-8.128;QD=54.36;ReadPosRankSum=-3.114;VQSLOD=3.2777;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:72.58:0,73,1950	0/0:15,0:15:45.15:0,45,2443	0/0:28,0:28:84.28:0,84,3711	0/0:27,0:27:70.56:0,71,3072	0/0:19,0:19:57.20:0,57,2689	0/0:18,0:17:46.36:0,46,1200	0/0:30,0:30:52.18:0,52,1744	1/1:0,18:18:45.03:1121,45,0	0/0:22,0:22:14.08:0,14,1418	0/0:30,0:30:90.25:0,90,4253	0/0:11,0:11:33.11:0,33,1813	0/0:22,0:22:66.23:0,66,3557	0/0:28,0:28:35.26:0,35,1777	0/0:19,0:19:42.87:0,43,1267	0/1:23,0:23:2.86:3,0,1317	0/0:26,0:26:78.25:0,78,3991	0/0:19,0:19:51.17:0,51,1375	0/0:19,0:19:48.69:0,49,1367	1/1:3,8:11:24.08:770,24,0	1/1:0,19:19:51.18:1768,51,0	1/1:5,14:19:33.11:946,33,0	0/0:15,0:15:12.88:0,13,1024	0/0:23,0:23:58.44:0,58,1597	0/0:24,0:25:30.13:0,30,1216	0/0:23,0:23:62.07:0,62,1720	0/0:33,0:33:99:0,99,4963	1/1:1,6:7:21.07:665,21,0	0/0:5,0:5:15.03:0,15,683
chr10	102637367	.	AC	A	9402.98	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=16.757;DP=603;FS=3.261;HRun=4;HaplotypeScore=194.4122;InbreedingCoeff=0.9939;MQ=89.92;MQ0=1;MQRankSum=-13.657;QD=25.14;ReadPosRankSum=0.755;VQSLOD=3.0411;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:33:72.22:862,72,0	0/0:17,0:17:51.17:0,51,711	0/0:29,0:29:75.15:0,75,986	0/0:31,0:30:76.44:0,76,956	0/0:19,0:19:48.15:0,48,655	1/1:2,15:17:42.13:498,42,0	1/1:3,28:31:72.22:854,72,0	1/1:18,0:18:24.51:110,25,0	1/1:1,22:23:63.19:755,63,0	0/0:27,0:27:78.26:0,78,1091	0/0:16,0:16:48.15:0,48,647	0/0:27,0:27:81.25:0,81,1100	1/1:6,22:28:57.17:681,57,0	1/1:0,17:17:45.14:538,45,0	1/1:1,21:22:54.17:647,54,0	0/0:26,0:26:75.24:0,75,1033	1/1:1,20:21:60.18:719,60,0	1/1:1,18:19:48.15:576,48,0	1/1:10,0:10:21.51:89,22,0	1/1:19,0:19:43.28:159,43,0	1/1:14,0:14:20.01:73,20,0	1/1:1,17:18:48.14:571,48,0	1/1:2,25:27:60.14:703,60,0	1/1:3,25:28:63.12:755,63,0	1/1:2,21:23:63.19:755,63,0	0/0:32,0:32:93.29:0,93,1265	1/1:6,0:6:15.48:58,15,0	0/0:5,0:5:15.05:0,15,209
chr10	102637424	.	CA	C	2043	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=2.262;DP=641;FS=0.000;HRun=2;HaplotypeScore=206.7260;InbreedingCoeff=0.9993;MQ=79.41;MQ0=0;MQRankSum=-7.689;QD=26.53;ReadPosRankSum=-2.697;VQSLOD=2.4594;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,102,1443	0/0:27,0:27:75.14:0,75,1068	0/0:23,0:23:37.94:0,38,693	0/0:25,1:24:56.67:0,57,885	0/0:12,0:12:36.12:0,36,534	0/0:19,0:19:54.18:0,54,805	0/0:38,0:38:93.13:0,93,1333	1/1:2,16:18:33.10:414,33,0	0/0:32,0:32:93.28:0,93,1345	0/0:23,0:23:69.23:0,69,1014	0/0:15,0:15:45.14:0,45,655	0/0:27,0:27:81.26:0,81,1193	0/0:27,0:27:68.94:0,69,934	0/0:21,0:21:63.17:0,63,907	0/0:21,0:21:59.98:0,60,838	0/0:20,0:20:60.20:0,60,898	0/0:32,0:32:96.26:0,96,1371	0/0:19,0:19:54.14:0,54,760	1/1:2,15:17:42.02:507,42,0	1/1:2,13:15:42.14:542,42,0	1/1:2,13:15:27.09:349,27,0	0/0:28,0:28:81.17:0,81,1125	0/0:17,0:17:48.14:0,48,678	0/0:29,0:29:72.24:0,72,1070	0/0:27,0:27:78.24:0,78,1113	0/0:32,0:32:96.29:0,96,1366	1/1:0,12:12:33.04:406,33,0	0/0:9,0:9:27.08:0,27,384
chr10	102638005	.	GTGTC	G	9217.24	PASS	AB=0.516;AC=35;AF=0.625;AN=56;BaseQRankSum=12.133;DP=607;FS=11.331;HRun=0;HaplotypeScore=214.4992;InbreedingCoeff=0.9632;MQ=66.62;MQ0=7;MQRankSum=-14.385;QD=24.91;ReadPosRankSum=-7.156;VQSLOD=1.9110;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:7,32:39:53.63:940,54,0	0/0:6,0:6:18.06:0,18,485	0/0:29,0:25:55.72:0,56,1276	0/0:44,0:34:53.41:0,53,1367	0/0:30,0:30:87.30:0,87,2303	1/1:5,9:14:27.08:463,27,0	1/1:2,26:28:29.19:523,29,0	1/1:5,19:24:60.05:1009,60,0	1/1:4,19:24:60.20:1095,60,0	0/0:31,0:31:84.28:0,84,2156	0/0:21,0:21:60.21:0,60,1578	0/0:24,0:24:69.24:0,69,1822	1/1:3,12:15:33.09:577,33,0	1/1:4,18:22:30.08:528,30,0	1/1:6,19:25:24.07:409,24,0	0/0:28,0:28:50.26:0,50,1908	1/1:9,9:17:27.03:402,27,0	1/1:1,9:9:17.69:335,18,0	1/1:1,10:11:33.11:620,33,0	1/1:4,8:12:14.98:217,15,0	1/1:12,13:25:14.55:170,15,0	1/1:5,22:27:33.07:575,33,0	0/1:1,15:16:0:0,0,0	1/1:11,20:31:23.43:321,23,0	1/1:0,15:15:24.08:444,24,0	0/0:18,0:18:54.17:0,54,1349	1/1:2,12:14:36.05:590,36,0	0/0:6,0:6:15.05:0,15,404
chr10	102638022	.	GCA	G	6358.52	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=12.008;DP=648;FS=3.589;HRun=0;HaplotypeScore=222.3084;InbreedingCoeff=0.9415;MQ=64.24;MQ0=5;MQRankSum=-8.463;QD=15.70;ReadPosRankSum=-3.944;VQSLOD=3.7697;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:8,31:39:11.10:162,11,0	0/0:6,0:6:18.06:0,18,309	0/0:31,0:20:26.39:0,26,261	0/0:42,0:29:50.33:0,50,479	0/0:34,0:34:93.30:0,93,1572	1/1:0,15:15:11.56:162,12,0	1/1:6,27:33:23.68:324,24,0	1/1:5,25:30:75.23:989,75,0	1/1:3,24:27:48.09:626,48,0	0/0:29,0:29:78.27:0,78,1350	0/0:20,0:20:54.17:0,54,905	0/0:23,0:23:66.20:0,66,1096	1/1:2,15:17:30.10:400,30,0	1/1:0,20:20:18.05:232,18,0	1/1:2,28:30:27.09:365,27,0	0/0:29,0:29:78.27:0,78,1358	1/1:0,17:17:42.14:562,42,0	1/1:1,13:14:17.62:240,18,0	1/1:4,9:13:27.09:362,27,0	1/1:1,11:12:9.03:116,9,0	1/1:5,24:29:19.85:282,20,0	1/1:5,24:29:30.10:406,30,0	1/1:0,15:15:2.97:41,3,0	1/1:4,26:30:17.40:243,17,0	1/1:3,13:16:14.94:202,15,0	0/0:22,0:22:63.22:0,63,1096	1/1:1,18:19:48.16:646,48,0	0/0:5,0:5:12.04:0,12,210
chr10	102638620	.	AGAG	A	16651.60	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=8.904;DP=726;FS=5.349;HRun=0;HaplotypeScore=119.2584;InbreedingCoeff=0.9999;MQ=74.72;MQ0=4;MQRankSum=-3.633;QD=36.36;ReadPosRankSum=5.726;VQSLOD=5.2893;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,38:41:93.32:1457,93,0	0/0:10,0:10:30.10:0,30,653	0/0:47,0:35:82.29:0,82,1411	0/0:49,0:31:51.18:0,51,841	0/0:30,0:30:84.29:0,84,1762	1/1:2,26:27:69.23:1085,69,0	1/1:4,21:24:42.14:649,42,0	1/1:3,20:22:57.18:831,57,0	1/1:0,24:24:63.21:983,63,0	0/0:25,0:25:75.24:0,75,1530	0/0:16,0:16:42.14:0,42,896	0/0:25,0:25:69.19:0,69,1378	1/1:3,28:31:72.25:1134,72,0	1/1:0,14:14:36.12:554,36,0	1/1:6,17:22:45.15:697,45,0	0/0:23,0:23:57.18:0,57,1149	1/1:2,37:39:99:1549,99,0	1/1:2,25:26:66.23:1046,66,0	1/1:2,12:14:36.10:537,36,0	1/1:1,19:20:57.14:856,57,0	1/1:2,22:23:51.13:781,51,0	1/1:2,24:26:63.17:954,63,0	1/1:2,19:21:48.16:751,48,0	1/1:1,30:30:75.25:1189,75,0	1/1:3,19:22:39.13:599,39,0	0/0:28,0:27:78.27:0,78,1569	1/1:1,24:25:63.21:998,63,0	0/0:15,0:15:42.15:0,42,765
chr10	102638629	.	GA	G	83.44	PASS	AB=0.739;AC=1;AF=0.018;AN=56;BaseQRankSum=5.410;DP=737;FS=2.599;HRun=1;HaplotypeScore=154.9353;InbreedingCoeff=-0.0182;MQ=69.06;MQ0=5;MQRankSum=-4.555;QD=4.91;ReadPosRankSum=-2.880;VQSLOD=-0.5855;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:95.36:0,95,723	0/0:12,0:12:36.12:0,36,574	0/0:52,0:34:84.23:0,84,1311	0/0:60,0:33:53:0,53,755	0/0:31,0:31:93.30:0,93,1444	0/0:26,0:25:68.38:0,68,493	0/0:24,0:23:50.38:0,50,380	0/0:28,0:27:61.37:0,61,511	0/0:26,0:26:68.35:0,68,547	0/0:26,0:26:78.26:0,78,1227	0/0:16,0:16:48.16:0,48,767	0/0:23,0:23:69.23:0,69,1073	0/0:29,0:29:67.87:0,68,487	0/0:17,0:17:41.70:0,42,353	0/0:17,0:16:44.75:0,45,339	0/0:22,0:22:63.21:0,63,988	0/0:37,0:37:97.78:0,98,684	0/0:25,1:25:68.65:0,69,539	0/0:16,0:16:47.51:0,48,477	0/0:20,0:20:59.55:0,60,480	0/0:27,0:26:50.48:0,50,451	0/0:25,0:25:65.62:0,66,533	0/0:19,0:19:47.62:0,48,352	0/0:31,0:29:77.60:0,78,605	0/0:21,0:21:44.41:0,44,341	0/0:26,0:26:69.91:0,70,1103	0/0:24,0:24:62.43:0,62,446	0/1:11,6:17:99:158,0,474
chr10	102638637	.	G	GAAA	416.07	PASS	AB=0.880;AC=2;AF=0.036;AN=56;BaseQRankSum=5.605;DP=768;FS=0.998;HRun=0;HaplotypeScore=185.2561;InbreedingCoeff=-0.0370;MQ=65.12;MQ0=3;MQRankSum=-4.178;QD=9.25;ReadPosRankSum=-1.924;VQSLOD=3.0248;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,2054	0/0:8,0:8:24.08:0,24,441	0/0:56,0:33:55.66:0,56,1406	0/0:74,0:39:57.74:0,58,1021	0/0:31,0:31:93.32:0,93,1708	0/0:28,0:27:78.27:0,78,1427	0/0:22,0:22:50.74:0,51,902	0/0:27,0:27:72.24:0,72,1292	0/0:26,0:26:75.26:0,75,1384	0/0:27,0:27:81.28:0,81,1498	0/0:13,0:13:39.13:0,39,726	0/0:22,0:22:66.23:0,66,1198	0/0:28,0:28:75.26:0,75,1354	0/0:21,0:21:57.18:0,57,1016	0/0:17,0:17:51.17:0,51,940	0/0:20,0:20:57.20:0,57,1044	0/0:37,0:37:99:0,102,1901	0/0:27,0:26:75.26:0,75,1384	0/0:21,0:21:54.66:0,55,985	0/0:21,0:21:63.22:0,63,1142	0/0:33,0:33:80.09:0,80,1423	0/0:30,0:30:81.27:0,81,1430	0/0:18,0:18:48.16:0,48,885	0/0:33,0:31:87.27:0,87,1611	0/0:21,0:21:48.16:0,48,845	0/1:26,0:26:24.18:24,0,1173	0/0:23,0:23:63.22:0,63,1152	0/1:13,6:19:99:480,0,534
chr10	102638655	.	A	AAAGGAGGAAGAGGAGAAGGT	5393.53	PASS	AB=0.766;AC=4;AF=0.071;AN=56;BaseQRankSum=-4.188;DP=788;FS=20.863;HRun=0;HaplotypeScore=417.0717;InbreedingCoeff=0.5124;MQ=62.91;MQ0=3;MQRankSum=-4.419;QD=42.47;ReadPosRankSum=-0.837;VQSLOD=2.2875;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:89.83:0,90,2376	0/0:9,0:9:24.01:0,24,633	0/0:47,0:26:19.69:0,20,402	0/1:76,0:41:2.82:3,0,386	0/0:32,0:32:69.18:0,69,2579	0/0:29,0:28:63.16:0,63,2174	0/0:26,0:26:60.50:0,60,1092	0/0:34,0:34:66.08:0,66,987	0/0:26,0:26:66.16:0,66,2357	0/0:29,0:29:69.20:0,69,2386	0/0:15,0:15:39.11:0,39,1480	0/0:26,0:26:69.07:0,69,2041	0/0:30,0:30:69.14:0,69,2339	0/0:23,0:23:57.15:0,57,1682	0/0:12,0:12:30.10:0,30,1134	0/0:18,0:18:48.10:0,48,1630	0/0:37,0:37:79.44:0,79,3101	0/0:25,0:24:48.11:0,48,1571	0/0:18,0:18:31.10:0,31,1198	0/0:21,0:21:48.09:0,48,1362	0/0:41,0:41:99:0,99,2356	0/0:26,0:26:60.15:0,60,1882	0/0:14,0:14:33.07:0,33,1193	0/0:39,0:37:80.78:0,81,2431	0/0:22,0:22:57.10:0,57,1385	0/1:4,13:34:84.68:3686,0,85	0/0:23,0:23:51.07:0,51,1669	1/1:17,0:17:45.09:1705,45,0
chr10	102640757	.	C	CATAT	8807.05	PASS	AB=0.654;AC=33;AF=0.589;AN=56;BaseQRankSum=15.247;DP=864;FS=1.932;HRun=0;HaplotypeScore=290.0887;InbreedingCoeff=0.8246;MQ=53.65;MQ0=0;MQRankSum=-6.796;QD=16.68;ReadPosRankSum=-3.827;VQSLOD=3.5699;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:18,14:34:15.05:381,15,0	0/0:15,0:15:42.13:0,42,703	0/0:21,0:21:40.88:0,41,578	0/0:25,0:21:32.96:0,33,531	0/0:24,0:24:57.19:0,57,991	1/1:7,14:22:29.97:657,30,0	1/1:9,13:22:30.07:692,30,0	1/1:18,0:47:99:548,102,0	1/1:16,29:46:38.55:859,39,0	0/0:52,0:52:99:0,135,2296	0/0:26,0:26:69.22:0,69,1172	0/0:44,0:44:99:0,117,2029	1/1:11,24:35:42.12:961,42,0	1/1:15,17:30:30.10:709,30,0	1/1:16,20:36:21.02:468,21,0	0/0:47,2:49:56.59:0,57,2139	1/1:3,11:14:36.12:858,36,0	1/1:5,7:12:18.95:458,19,0	1/1:4,0:14:30.44:137,30,0	1/1:13,0:40:66.06:408,66,0	0/1:18,0:33:12.27:171,0,12	1/1:14,19:35:29.82:541,30,0	1/1:14,15:30:15.05:368,15,0	0/1:10,7:19:0.08:0,0,0	1/1:6,24:31:21.06:481,21,0	0/0:51,0:52:99:0,138,2249	0/1:8,0:25:23.66:109,0,24	0/0:27,0:27:78.27:0,78,1356
chr10	102640794	.	A	AC	10729.49	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=10.356;DP=827;FS=3.140;HRun=1;HaplotypeScore=284.5339;InbreedingCoeff=0.9705;MQ=52.84;MQ0=0;MQRankSum=-5.185;QD=21.33;ReadPosRankSum=-2.203;VQSLOD=3.5219;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,29:35:13.56:197,14,0	0/0:17,0:17:48.15:0,48,654	0/0:18,0:13:36.04:0,36,437	0/0:12,0:9:17.85:0,18,195	0/0:16,0:16:48.15:0,48,653	1/1:1,28:29:41.79:661,42,0	1/1:0,29:29:51.17:814,51,0	1/1:6,40:45:99:2000,129,0	1/1:2,30:32:35.79:564,36,0	0/0:61,0:61:99:0,181,2484	0/0:30,0:30:87.29:0,87,1206	0/0:45,0:45:99:0,129,1758	1/1:1,35:36:59.99:957,60,0	1/1:0,27:27:23.64:383,24,0	1/1:4,32:35:25.40:430,25,0	0/0:39,2:41:69.59:0,70,1534	1/1:1,13:14:29.77:466,30,0	1/1:1,10:11:24.08:361,24,0	1/1:3,20:23:60.12:945,60,0	1/1:6,34:40:68.51:1044,69,0	1/1:3,21:24:15.30:240,15,0	1/1:3,25:28:26.94:432,27,0	1/1:1,24:25:20.46:335,20,0	1/1:2,10:12:5.80:96,6,0	1/1:3,26:29:11.69:191,12,0	0/0:51,0:51:99:0,150,2077	1/1:2,25:27:39.11:613,39,0	0/0:33,0:33:99:0,99,1379
chr10	102640870	.	A	ACACACACACACAC	13932.01	PASS	AB=0.960;AC=34;AF=0.607;AN=56;BaseQRankSum=13.993;DP=794;FS=5.362;HRun=0;HaplotypeScore=336.5039;InbreedingCoeff=0.8173;MQ=64.39;MQ0=2;MQRankSum=-12.257;QD=32.03;ReadPosRankSum=-2.733;VQSLOD=3.0194;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:39:31.55:682,32,0	0/0:18,0:18:54.18:0,54,2038	0/0:53,0:43:99:0,119,2711	0/0:35,0:30:71.31:0,71,1819	0/0:25,0:25:72.19:0,72,2302	1/1:12,3:16:3:775,3,0	1/1:29,3:32:57.40:1145,57,0	1/1:22,0:27:58.29:585,58,0	1/1:13,8:22:21.62:1280,22,0	0/0:54,0:54:99:0,162,5339	0/0:24,0:24:72.18:0,72,2454	0/0:39,0:39:99:0,117,4162	1/1:16,5:25:34.39:1580,34,0	1/1:17,1:17:13.19:387,13,0	1/1:20,8:28:18.90:1165,19,0	0/0:45,0:45:99:0,135,5107	0/1:12,0:12:0.65:160,0,1	1/1:12,0:14:1.01:555,1,0	1/1:9,0:15:13.55:267,14,0	1/1:17,0:32:40.04:837,40,0	1/1:32,0:38:1.20:375,1,0	1/1:18,5:25:38.13:1017,38,0	0/1:21,2:23:1.76:437,0,2	1/1:15,7:23:25.79:551,26,0	1/1:11,12:23:50.15:1569,50,0	0/0:45,0:45:99:0,135,4773	1/1:12,0:22:44.02:564,44,0	0/0:20,0:20:54.17:0,54,1931
chr10	102641315	.	CT	C	6476.90	PASS	AB=0.697;AC=34;AF=0.607;AN=56;BaseQRankSum=5.435;DP=457;FS=195.042;HRun=1;HaplotypeScore=87.1156;InbreedingCoeff=0.7821;MQ=71.14;MQ0=0;MQRankSum=-12.242;QD=23.13;ReadPosRankSum=-0.407;VQSLOD=-0.0945;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:16:36.59:504,37,0	0/0:19,0:19:57.15:0,57,881	0/0:16,0:16:48.02:0,48,692	0/0:18,0:17:43.38:0,43,638	0/0:23,0:23:66.20:0,66,1009	1/1:3,5:8:15.05:209,15,0	1/1:1,13:14:33.11:460,33,0	1/1:0,22:22:66.22:918,66,0	1/1:11,1:12:3.01:42,3,0	0/0:18,0:18:51.17:0,51,805	0/0:13,0:13:39.13:0,39,624	0/0:22,0:22:66.23:0,66,1055	1/1:11,9:20:21.07:293,21,0	1/1:5,6:11:15.05:210,15,0	1/1:9,13:22:20.91:523,21,0	0/0:16,0:16:48.16:0,48,767	0/1:7,10:17:12.34:305,0,12	1/1:1,9:10:4.77:313,5,0	1/1:4,16:20:22.25:640,22,0	1/1:8,14:22:29.84:419,30,0	1/1:1,4:5:9.03:126,9,0	1/1:3,11:14:27.09:377,27,0	1/1:9,10:19:6.13:318,6,0	1/1:4,8:12:17.98:251,18,0	1/1:8,15:23:30.10:419,30,0	0/0:26,0:26:78.23:0,78,1167	0/1:9,4:13:25.22:150,0,25	0/0:6,0:6:18.06:0,18,280
chr10	102641322	.	CAG	C	1698.74	PASS	AB=0.733;AC=15;AF=0.268;AN=56;BaseQRankSum=12.859;DP=440;FS=119.858;HRun=0;HaplotypeScore=107.5943;InbreedingCoeff=-0.3507;MQ=69.00;MQ0=0;MQRankSum=-10.277;QD=7.45;ReadPosRankSum=4.337;VQSLOD=-0.6480;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,3:13:1.57:2,0,543	0/0:19,0:19:57.20:0,57,1092	0/0:18,0:18:43.74:0,44,791	0/0:17,0:16:45.13:0,45,736	0/0:21,0:21:63.22:0,63,1217	0/1:5,3:8:79.22:79,0,265	0/1:12,1:13:0.71:1,0,529	0/0:18,0:18:51.17:0,51,971	0/1:1,11:12:42.52:123,0,43	0/0:18,0:18:54.16:0,54,1004	0/0:16,0:16:48.15:0,48,886	0/0:20,0:20:60.19:0,60,1113	0/1:9,11:20:99:233,0,340	0/1:6,5:11:72.09:72,0,247	0/1:12,9:21:99:245,0,622	0/0:16,0:16:45.15:0,45,869	0/1:11,6:17:84.53:85,0,425	0/1:9,1:10:10.37:10,0,491	0/0:15,3:18:7.66:0,8,754	0/1:13,8:21:99:188,0,523	0/0:2,1:3:3.01:0,3,58	0/1:13,3:16:63.05:63,0,522	0/1:10,9:19:99:203,0,333	0/1:8,4:12:75.13:75,0,296	0/1:14,8:22:99:229,0,442	0/0:22,0:22:63.22:0,63,1209	0/1:4,9:13:85.17:241,0,85	0/0:6,0:6:18.06:0,18,348
chr10	102641327	.	C	CCCT	5419.03	PASS	AB=0.773;AC=17;AF=0.304;AN=56;BaseQRankSum=12.429;DP=467;FS=120.815;HRun=0;HaplotypeScore=127.8025;InbreedingCoeff=-0.4487;MQ=65.77;MQ0=0;MQRankSum=-10.908;QD=18.49;ReadPosRankSum=1.114;VQSLOD=1.8441;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,3:17:99:145,0,300	0/0:19,0:19:54.18:0,54,912	0/0:17,0:17:48.11:0,48,765	0/0:18,0:17:39.13:0,39,619	0/0:22,0:22:63.20:0,63,1048	0/1:6,3:9:99:191,0,229	0/1:14,1:15:99:112,0,278	0/1:22,0:22:99:224,0,659	0/1:3,11:14:30.02:289,0,30	0/0:18,0:18:51.17:0,51,864	0/0:16,0:16:48.16:0,48,819	0/0:18,0:18:54.17:0,54,887	0/1:8,11:19:99:569,0,207	0/1:9,5:14:75.95:307,0,76	0/1:13,9:22:99:503,0,547	0/0:16,0:16:45.15:0,45,761	0/1:11,6:17:99:153,0,280	0/1:11,1:12:94.89:95,0,352	0/1:14,3:17:99:154,0,513	0/1:14,8:22:99:413,0,478	0/0:1,1:2:3.01:0,3,51	0/1:14,3:17:99:242,0,377	0/1:12,9:21:99:533,0,252	0/1:13,4:17:75.06:385,0,75	0/1:15,8:23:99:527,0,372	0/0:22,0:22:66.23:0,66,1125	0/1:6,9:15:62.97:576,0,63	0/0:6,0:6:18.06:0,18,307
chr10	102641776	.	C	CT	2219.11	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-2.762;DP=576;FS=0.000;HRun=9;HaplotypeScore=86.6655;InbreedingCoeff=0.9684;MQ=68.33;MQ0=0;MQRankSum=1.967;QD=19.64;ReadPosRankSum=-3.207;VQSLOD=2.6568;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,159,1364	0/0:16,0:16:35.97:0,36,308	0/0:11,0:10:6.94:0,7,113	0/0:10,1:9:11.83:0,12,90	0/0:27,0:27:80.98:0,81,701	0/0:25,0:25:68.98:0,69,597	0/0:19,0:19:50.96:0,51,436	1/1:2,26:28:72.13:766,72,0	0/0:25,0:25:62.94:0,63,541	0/0:22,0:22:56.98:0,57,495	0/0:17,0:17:44.96:0,45,386	0/0:11,0:11:20.99:0,21,182	0/0:22,0:22:27.99:0,28,417	0/0:24,0:24:59.96:0,60,517	0/0:18,0:18:44.99:0,45,391	0/0:13,0:13:35.99:0,36,313	0/0:20,0:20:50.98:0,51,443	0/0:16,0:16:44.96:0,45,384	1/1:9,17:28:17.53:466,18,0	1/1:3,11:14:30.03:317,30,0	1/1:6,9:15:27.07:299,27,0	0/0:15,0:15:32.94:0,33,277	0/0:10,0:10:26.99:0,27,234	0/0:12,0:12:29.99:0,30,260	0/0:36,0:36:77.94:0,78,674	0/0:26,0:26:74.98:0,75,650	1/1:7,20:28:50.97:545,51,0	0/0:12,0:12:35.99:0,36,312
chr10	102642115	.	C	CTTTT	8691.83	PASS	AB=0.560;AC=35;AF=0.625;AN=56;BaseQRankSum=5.628;DP=464;FS=0.000;HRun=10;HaplotypeScore=98.8159;InbreedingCoeff=0.9061;MQ=75.19;MQ0=0;MQRankSum=-9.954;QD=29.36;ReadPosRankSum=-4.207;VQSLOD=2.5309;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,11:18:39.13:798,39,0	0/0:6,0:6:11.97:0,12,152	0/0:13,0:13:26.84:0,27,326	0/0:11,0:11:11.58:0,12,176	0/0:27,0:28:64.65:0,65,928	1/1:4,10:14:18.06:403,18,0	1/1:5,9:18:27.05:551,27,0	1/1:9,1:39:81.48:575,81,0	1/1:4,12:16:39.13:843,39,0	0/0:28,0:28:74.92:0,75,981	0/0:14,0:15:36.03:0,36,490	0/0:14,0:14:33.02:0,33,467	1/1:3,8:15:30.10:641,30,0	1/1:2,9:12:18.06:354,18,0	1/1:1,10:14:27.09:573,27,0	0/0:21,0:21:59.59:0,60,743	1/1:6,15:23:36.12:787,36,0	1/1:5,12:18:24.08:538,24,0	1/1:11,1:21:49.55:430,50,0	1/1:5,0:14:23.85:145,24,0	1/1:1,0:12:20.60:143,21,0	1/1:2,3:6:17.97:278,18,0	1/1:5,2:7:15.04:258,15,0	1/1:2,11:13:25.64:519,26,0	1/1:10,12:22:42.10:791,42,0	0/0:22,0:22:54.10:0,54,712	0/1:3,0:14:26.66:66,0,27	0/0:10,0:10:23.90:0,24,237
chr10	102642223	.	AT	A	4347.48	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=0.227;DP=464;FS=8.335;HRun=10;HaplotypeScore=79.6393;InbreedingCoeff=0.9780;MQ=70.27;MQ0=0;MQRankSum=-0.384;QD=20.03;ReadPosRankSum=0.981;VQSLOD=5.5870;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:56.99:495,57,0	0/0:6,0:6:9.02:0,9,100	0/0:10,0:10:17.61:0,18,172	0/0:4,0:3:8.86:0,9,81	0/0:20,0:20:48.13:0,48,529	1/1:2,12:14:35.98:312,36,0	1/1:2,15:17:44.98:391,45,0	0/0:27,0:27:57.90:0,58,251	1/1:6,9:15:23.98:208,24,0	0/0:14,0:14:42.11:0,42,465	0/0:18,1:19:25.08:0,25,498	0/0:17,0:17:48.13:0,48,529	1/1:2,9:11:23.99:208,24,0	1/1:5,17:22:47.97:417,48,0	1/1:3,13:16:35.99:313,36,0	0/0:17,0:17:36.10:0,36,398	1/1:2,20:22:50.98:442,51,0	1/1:4,22:26:65.98:573,66,0	0/0:27,0:27:29.63:0,30,154	0/0:17,0:17:20.42:0,20,96	0/0:22,0:22:48.05:0,48,192	1/1:2,8:10:20.98:182,21,0	1/1:5,11:16:29.95:260,30,0	1/1:2,18:20:47.98:417,48,0	1/1:0,7:7:15:130,15,0	0/0:19,0:19:39.09:0,39,417	0/0:13,0:13:29.46:0,29,118	0/0:15,0:15:45.11:0,45,490
chr10	102642225	.	T	TA	3558.37	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-0.690;DP=466;FS=8.641;HRun=0;HaplotypeScore=85.1066;InbreedingCoeff=0.9248;MQ=71.17;MQ0=0;MQRankSum=2.013;QD=30.68;ReadPosRankSum=-2.076;VQSLOD=2.2666;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:58.76:0,59,390	0/0:5,0:5:15.01:0,15,174	0/0:10,0:10:24.07:0,24,309	0/1:6,0:5:1.34:1,0,76	0/0:21,0:21:57.16:0,57,745	0/0:14,0:14:41.14:0,41,280	0/0:17,0:17:49.91:0,50,339	1/1:2,30:32:87.16:1032,87,0	0/0:14,0:14:38.15:0,38,281	0/0:14,0:14:42.14:0,42,585	0/0:18,0:18:54.12:0,54,701	0/0:17,0:17:51.16:0,51,696	0/0:10,0:10:26.14:0,26,174	0/0:22,0:22:58.69:0,59,405	0/0:14,0:14:38.61:0,39,264	0/0:18,0:18:51.14:0,51,640	0/0:22,0:22:58.93:0,59,396	0/0:26,0:26:71.58:0,72,485	1/1:0,26:26:78.17:910,78,0	1/1:0,17:17:41.99:486,42,0	1/1:0,22:22:54.18:700,54,0	0/0:9,0:9:26.71:0,27,180	0/0:14,0:14:38.65:0,39,276	0/0:20,0:20:56.44:0,56,390	0/0:7,0:7:14.82:0,15,99	0/0:20,0:20:60.14:0,60,704	1/1:0,13:13:33.11:428,33,0	0/0:17,0:17:51.13:0,51,658
chr10	102642629	.	CTCTCTCTCTCTCTT	C	3479.87	PASS	AB=0.980;AC=25;AF=0.446;AN=56;BaseQRankSum=1.838;DP=443;FS=0.498;HRun=0;HaplotypeScore=140.4279;InbreedingCoeff=0.2245;MQ=46.82;MQ0=45;MQRankSum=-0.964;QD=12.52;ReadPosRankSum=0.411;VQSLOD=2.4957;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:22:20.38:243,20,0	0/1:6,0:6:6.66:7,0,287	0/0:22,0:2:5.98:0,6,46	0/0:33,0:3:4.36:0,4,29	0/0:14,0:13:20.89:0,21,751	1/1:16,2:17:23.96:467,24,0	1/1:19,0:18:27.04:383,27,0	0/1:9,0:9:56.87:57,0,206	1/1:14,1:14:15.05:429,15,0	0/0:8,0:7:21.06:0,21,634	0/0:14,0:13:32.75:0,33,659	0/0:21,0:18:47.68:0,48,1523	0/1:15,0:15:2.07:168,0,2	0/1:10,1:10:24.16:204,0,24	1/1:19,3:21:22.74:517,23,0	0/0:13,0:13:39.03:0,39,1149	1/1:25,1:24:38.87:466,39,0	0/1:13,1:10:7.48:155,0,7	0/1:10,0:10:44.07:129,0,44	0/0:8,0:6:12.51:0,13,222	0/1:15,0:13:17.17:17,0,37	0/1:11,0:10:31.48:31,0,36	0/1:13,1:14:20.35:20,0,41	0/1:24,0:21:53.57:54,0,86	1/1:11,0:11:9.46:125,9,0	0/0:22,0:21:60.01:0,60,1672	0/1:11,0:10:6.70:7,0,214	0/0:10,0:8:24.07:0,24,922
chr10	102642630	.	T	TTCCC	678.72	PASS	AB=0.970;AC=13;AF=0.232;AN=56;BaseQRankSum=4.160;DP=436;FS=50.662;HRun=0;HaplotypeScore=105.9588;InbreedingCoeff=-0.0693;MQ=46.67;MQ0=44;MQRankSum=-3.423;QD=3.17;ReadPosRankSum=-0.207;VQSLOD=-0.4255;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,1:19:75.59:76,0,139	0/1:6,0:6:5.97:6,0,174	0/0:23,0:2:3.01:0,3,59	0/1:33,0:4:0.08:0,0,0	0/0:14,0:13:17.59:0,18,318	0/1:16,0:17:99:198,0,202	0/1:18,0:17:99:99,0,320	0/0:9,0:9:27.01:0,27,404	0/1:13,1:13:70.35:113,0,70	0/0:8,0:7:21.07:0,21,389	0/0:14,0:13:30.10:0,30,572	0/0:22,0:19:49.40:0,49,928	0/1:15,0:15:5.39:5,0,293	0/0:10,0:9:17.91:0,18,265	0/1:20,1:21:99:127,0,225	0/0:13,0:13:36.09:0,36,622	0/1:24,0:22:80.66:81,0,462	0/1:13,0:10:28.53:29,0,84	0/0:10,0:10:18.27:0,18,265	0/0:8,0:6:11.81:0,12,219	0/0:15,0:13:5.58:0,6,104	0/0:11,0:10:11.69:0,12,144	0/1:13,0:13:38.91:39,0,59	0/0:22,0:19:18.49:0,18,267	1/1:8,3:11:8.30:53,8,0	0/0:22,0:21:60.21:0,60,1139	0/0:11,0:10:26.72:0,27,411	0/0:10,0:8:24.08:0,24,474
chr10	102642631	.	CTCTCTCTCTCTT	C	3066.02	PASS	AB=0.961;AC=29;AF=0.518;AN=56;BaseQRankSum=4.311;DP=438;FS=3.851;HRun=0;HaplotypeScore=130.7849;InbreedingCoeff=0.5445;MQ=46.52;MQ0=42;MQRankSum=-2.319;QD=11.75;ReadPosRankSum=0.416;VQSLOD=2.4179;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:19:5.05:161,5,0	0/0:6,0:6:8.41:0,8,269	0/0:25,0:3:5.98:0,6,46	0/0:36,0:5:7.35:0,7,51	0/0:14,0:13:20.89:0,21,662	1/1:17,0:16:23.96:337,24,0	1/1:18,0:17:26.26:261,26,0	0/1:9,0:9:76.36:76,0,144	1/1:14,0:14:17.91:303,18,0	0/0:9,0:8:24.05:0,24,554	0/0:13,0:12:29.72:0,30,523	0/0:22,0:19:50.36:0,50,1380	1/1:13,2:15:29.71:389,30,0	1/1:11,0:10:20.97:260,21,0	1/1:21,1:21:29.15:415,29,0	0/0:13,0:13:39.03:0,39,1003	1/1:24,0:22:41.30:360,41,0	1/1:14,0:10:11.09:178,11,0	0/1:10,0:10:38.99:135,0,39	0/0:8,0:6:12.49:0,12,147	1/1:15,0:13:2.32:22,2,0	1/1:12,0:11:6.95:44,7,0	0/1:11,1:12:13.70:114,0,14	0/1:19,3:19:4.56:133,0,5	1/1:11,0:11:5:46,5,0	0/0:21,0:20:57.46:0,57,1399	0/1:11,0:10:34.06:34,0,146	0/0:10,0:8:24.07:0,24,778
chr10	102642639	.	CTCTT	C	1945.72	PASS	AB=0.970;AC=29;AF=0.537;AN=54;BaseQRankSum=3.341;DP=443;FS=0.000;HRun=0;HaplotypeScore=95.8826;InbreedingCoeff=0.5425;MQ=45.70;MQ0=46;MQRankSum=-0.367;QD=7.60;ReadPosRankSum=1.064;VQSLOD=1.5236;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,1:19:2.34:103,0,2	0/0:5,0:5:13.94:0,14,145	0/0:41,0:5:11.94:0,12,91	0/0:43,0:6:9.84:0,10,71	0/0:12,0:11:16.38:0,16,241	1/1:17,1:17:21.14:160,21,0	1/1:17,0:16:2.85:130,3,0	1/1:10,0:10:29.75:216,30,0	0/1:14,1:14:17.92:61,0,18	0/1:8,0:8:12.91:13,0,246	0/0:12,0:11:23.66:0,24,194	0/0:22,0:19:48.64:0,49,636	1/1:15,1:16:7.29:146,7,0	1/1:8,2:9:20.96:183,21,0	0/1:20,1:20:4.81:152,0,5	0/0:16,0:16:48.02:0,48,592	1/1:23,1:22:20.43:242,20,0	1/1:13,2:11:16.74:117,17,0	1/1:10,0:10:25.15:177,25,0	./.	1/1:14,0:13:2.12:23,2,0	1/1:12,0:11:9.33:75,9,0	0/1:12,0:12:21.69:59,0,22	1/1:18,2:17:17.06:136,17,0	0/0:9,0:9:5.65:0,6,31	0/0:16,0:15:38.72:0,39,470	1/1:10,0:9:3.17:146,3,0	0/0:7,0:5:15.04:0,15,189
chr10	102642641	.	CTT	C	1931.83	PASS	AB=1.000;AC=32;AF=0.593;AN=54;BaseQRankSum=3.730;DP=438;FS=1.840;HRun=4;HaplotypeScore=86.9772;InbreedingCoeff=0.7665;MQ=47.57;MQ0=45;MQRankSum=-0.279;QD=7.70;ReadPosRankSum=-0.011;VQSLOD=-0.3526;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:19:14.97:122,15,0	0/0:5,0:5:13.94:0,14,117	0/0:40,0:5:11.61:0,12,90	0/0:47,0:7:9.84:0,10,71	0/0:12,0:11:16.37:0,16,166	1/1:18,0:17:22.91:158,23,0	1/1:18,0:17:19.92:165,20,0	1/1:11,0:11:29.75:216,30,0	0/1:14,0:14:9.78:68,0,10	0/0:8,0:8:9.58:0,10,141	0/0:11,0:10:23.66:0,24,194	0/0:21,0:18:48.58:0,49,455	1/1:15,0:15:22.84:141,23,0	1/1:10,0:9:20.95:169,21,0	1/1:21,0:20:5.20:122,5,0	0/0:16,0:16:47.98:0,48,482	1/1:24,0:22:30.43:235,30,0	1/1:14,0:11:14.94:131,15,0	1/1:2,8:10:25.15:187,25,0	./.	1/1:13,0:13:1.71:23,2,0	1/1:12,0:11:10.77:84,11,0	0/1:11,0:11:2.50:59,0,2	1/1:20,0:17:17.81:138,18,0	1/1:7,0:7:1.21:3,1,0	0/0:16,0:15:43.01:0,43,396	1/1:10,0:9:17.27:112,17,0	0/0:7,0:5:14.45:0,14,102
chr10	102642678	.	CTCTCTCTTTT	C	2138.43	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=6.596;DP=463;FS=1.665;HRun=0;HaplotypeScore=148.8334;InbreedingCoeff=0.9247;MQ=61.66;MQ0=14;MQRankSum=-7.741;QD=48.60;ReadPosRankSum=0.718;VQSLOD=3.3982;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:72.23:0,72,3393	0/0:5,0:5:11.96:0,12,402	0/0:39,0:22:51.08:0,51,2131	0/0:45,0:18:29.31:0,29,827	0/0:8,0:8:18.06:0,18,897	0/0:15,0:14:21.07:0,21,1055	0/0:21,0:20:42.14:0,42,2028	1/1:6,7:11:24.07:696,24,0	0/0:18,0:18:39.13:0,39,1903	0/0:12,0:12:32.16:0,32,1678	0/0:16,0:16:42.62:0,43,1952	0/0:18,0:18:51.17:0,51,2492	0/0:16,0:15:36.12:0,36,1734	0/0:9,0:9:21.07:0,21,1080	0/0:21,0:20:36.12:0,36,1678	0/0:23,0:23:69.24:0,69,3411	0/0:28,0:25:54.12:0,54,2395	0/0:16,0:13:24.08:0,24,1211	1/1:3,2:4:6.02:191,6,0	1/1:1,5:7:12.04:382,12,0	1/1:5,4:8:5.99:171,6,0	0/0:9,0:7:15.05:0,15,732	0/0:12,0:12:26.18:0,26,1113	0/0:24,0:22:57.20:0,57,2787	./.	0/0:18,0:18:48.16:0,48,2217	1/1:2,8:10:27.09:858,27,0	0/0:9,0:9:27.05:0,27,770
chr10	102642698	.	C	CAA	9894.68	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-3.522;DP=518;FS=0.827;HRun=3;HaplotypeScore=74.0509;InbreedingCoeff=0.9574;MQ=61.64;MQ0=10;MQRankSum=-5.433;QD=29.62;ReadPosRankSum=3.345;VQSLOD=4.3307;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:41:75.26:1365,75,0	0/0:2,0:2:6.02:0,6,84	0/0:33,0:27:60.39:0,60,890	0/0:32,0:23:45.71:0,46,559	0/0:7,0:7:21.07:0,21,290	1/1:0,13:13:24.08:439,24,0	1/1:1,22:23:42.14:770,42,0	1/1:10,18:29:78.09:1094,78,0	1/1:1,16:17:33.11:605,33,0	0/0:13,0:13:39.13:0,39,544	0/0:17,0:17:45.14:0,45,611	0/0:21,0:21:49.49:0,49,709	1/1:4,16:19:30.10:550,30,0	1/1:1,10:12:18.06:330,18,0	1/1:3,21:23:30.10:550,30,0	0/0:29,0:29:81.21:0,81,1092	1/1:1,30:28:48.16:880,48,0	1/1:3,21:22:29.78:504,30,0	1/1:6,0:6:18.05:234,18,0	1/1:11,1:12:32.86:345,33,0	1/1:5,6:10:14.91:156,15,0	1/1:0,10:10:20.97:314,21,0	1/1:2,11:13:24.97:421,25,0	1/1:2,28:30:49.10:921,49,0	1/1:0,5:5:6.02:110,6,0	0/0:24,0:24:60.20:0,60,838	1/1:11,0:10:32.90:308,33,0	0/0:4,0:4:12.04:0,12,167
chr10	102642700	.	AAC	A	153.50	PASS	AB=0.950;AC=7;AF=0.125;AN=56;BaseQRankSum=4.881;DP=527;FS=10.286;HRun=0;HaplotypeScore=104.0187;InbreedingCoeff=-0.1824;MQ=61.69;MQ0=10;MQRankSum=-4.907;QD=1.23;ReadPosRankSum=-2.308;VQSLOD=1.0270;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:22.02:0,22,367	0/0:2,0:2:6.02:0,6,114	0/0:35,0:29:65.59:0,66,1066	0/0:30,0:23:50.16:0,50,790	0/0:7,0:7:21.07:0,21,382	0/0:14,0:13:26.54:0,27,169	0/0:23,0:23:14.24:0,14,260	0/1:30,0:30:35.07:35,0,536	0/0:18,0:18:35.30:0,35,240	0/0:16,0:16:48.14:0,48,810	0/0:17,0:17:48.62:0,49,848	0/0:21,0:21:55.53:0,56,998	0/0:22,0:21:41.43:0,41,331	0/1:11,0:11:18.66:19,0,55	0/0:21,1:21:3.60:0,4,190	0/0:28,0:28:76.33:0,76,1480	0/0:30,1:28:28.95:0,29,252	0/1:24,0:22:33.08:33,0,166	0/1:4,2:6:66.72:67,0,121	0/0:11,1:12:1.74:0,2,297	0/0:13,0:12:7.32:0,7,249	0/1:10,0:10:26.90:27,0,98	0/0:14,1:15:2.36:0,2,221	0/1:30,1:30:69.63:70,0,219	0/0:6,0:6:8.88:0,9,61	0/0:24,0:24:69.23:0,69,1211	0/1:12,1:12:31.27:31,0,362	0/0:4,0:4:12.04:0,12,227
chr10	102643037	.	T	TACAC	2480.16	PASS	AB=1.000;AC=38;AF=0.731;AN=52;BaseQRankSum=-0.228;DP=524;FS=13.231;HRun=0;HaplotypeScore=121.6715;InbreedingCoeff=0.3907;MQ=63.25;MQ0=13;MQRankSum=0.563;QD=5.86;ReadPosRankSum=-1.315;VQSLOD=1.5307;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:40:5.73:35,6,0	0/0:5,0:5:3.01:0,3,46	./.	./.	1/1:6,0:8:0.89:2,1,0	0/1:13,0:13:0:1,0,0	1/1:14,0:14:5.75:53,6,0	1/1:24,0:22:5.91:56,6,0	1/1:12,0:13:8.71:57,9,0	0/0:20,0:20:3.44:0,3,83	0/0:11,0:11:1.01:0,1,101	0/0:16,0:17:15.04:0,15,213	1/1:11,0:19:2.74:12,3,0	1/1:18,0:18:6.02:121,6,0	1/1:22,1:23:9.03:192,9,0	0/1:13,0:13:1.25:1,0,104	1/1:19,0:24:22.75:181,23,0	1/1:13,0:22:13.81:63,14,0	1/1:17,0:15:11.96:114,12,0	1/1:15,0:14:6:55,6,0	1/1:53,0:50:70.59:865,71,0	1/1:14,0:15:18.66:232,19,0	1/1:8,0:12:2.74:12,3,0	1/1:33,1:35:35.43:462,35,0	0/1:14,0:14:32.26:32,0,83	0/1:9,0:13:10.72:11,0,47	1/1:9,5:13:3.01:70,3,0	0/0:3,0:5:6.01:0,6,55
chr10	102643147	.	C	CTG	6354.63	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=7.371;DP=558;FS=18.041;HRun=0;HaplotypeScore=140.5613;InbreedingCoeff=0.8879;MQ=72.55;MQ0=12;MQRankSum=-7.404;QD=27.04;ReadPosRankSum=-1.379;VQSLOD=4.2074;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,2:18:41.86:608,42,0	0/0:8,0:8:20.69:0,21,223	0/0:28,0:18:24.64:0,25,507	0/0:53,0:36:87.11:0,87,1124	0/0:16,0:16:42.12:0,42,542	1/1:13,3:15:38.93:484,39,0	1/1:26,2:27:63.17:896,63,0	0/0:27,0:27:63.14:0,63,782	1/1:9,4:13:33.87:458,34,0	0/0:32,0:32:81.22:0,81,1065	0/0:16,0:16:38.60:0,39,480	0/0:18,0:18:39.13:0,39,539	1/1:13,3:16:39.06:528,39,0	1/1:12,5:16:33.11:504,33,0	1/1:26,4:30:68.21:861,68,0	0/0:15,0:15:25.87:0,26,397	1/1:9,2:11:27.09:393,27,0	1/1:2,13:15:10.59:164,11,0	0/0:18,0:17:16.70:0,17,345	0/0:19,0:19:2.33:0,2,187	0/0:33,0:31:36.14:0,36,394	1/1:13,5:18:34.84:470,35,0	1/1:7,1:8:12.04:192,12,0	1/1:19,1:20:32.92:449,33,0	1/1:9,4:13:23.28:303,23,0	0/0:26,0:24:58.44:0,58,645	0/0:14,0:14:18.19:0,18,242	0/1:12,0:11:44.75:45,0,82
chr10	102643151	.	G	GT	2245.90	PASS	AB=0.864;AC=30;AF=0.536;AN=56;BaseQRankSum=11.288;DP=551;FS=25.988;HRun=1;HaplotypeScore=129.1446;InbreedingCoeff=0.5609;MQ=66.86;MQ0=13;MQRankSum=-5.316;QD=7.56;ReadPosRankSum=-0.881;VQSLOD=-0.6816;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:19.57:192,20,0	0/0:10,0:10:23.06:0,23,263	0/0:25,0:15:24.32:0,24,500	0/0:49,0:32:89.02:0,89,1158	0/0:19,0:19:49.39:0,49,647	1/1:16,0:15:1.87:132,2,0	1/1:26,1:26:55.43:321,55,0	0/0:24,0:24:69.12:0,69,871	1/1:14,1:15:29.28:205,29,0	0/0:33,0:33:93.24:0,93,1222	0/0:15,0:15:45.06:0,45,588	0/0:19,0:19:47.52:0,48,629	0/1:15,1:16:11.85:80,0,12	1/1:14,3:16:21.71:149,22,0	1/1:20,9:29:50.66:349,51,0	0/1:12,1:13:8.29:8,0,421	1/1:10,1:10:15.91:129,16,0	1/1:12,0:13:11.46:72,11,0	0/1:14,2:15:5.42:5,0,424	0/1:13,6:19:12.98:13,0,275	0/0:31,4:32:44.69:0,45,464	1/1:15,5:20:20.97:259,21,0	1/1:7,1:8:9.87:37,10,0	1/1:18,1:19:29.78:139,30,0	1/1:10,2:12:22.91:165,23,0	0/0:25,0:24:54.97:0,55,802	0/1:15,0:15:16.68:17,0,233	0/1:7,7:13:99:183,0,105
chr10	102643153	.	G	GGTGTGTGT	6116.04	PASS	AB=0.930;AC=37;AF=0.685;AN=54;BaseQRankSum=4.082;DP=611;FS=0.702;HRun=0;HaplotypeScore=245.6260;InbreedingCoeff=0.4829;MQ=60.50;MQ0=14;MQRankSum=-5.568;QD=13.71;ReadPosRankSum=-1.164;VQSLOD=3.5289;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:51.04:87,0,51	0/1:8,0:12:9.23:66,0,9	0/1:25,0:14:0:0,0,0	./.	0/0:17,0:18:18.06:0,18,377	1/1:22,0:21:21.07:413,21,0	1/1:30,0:30:13.53:209,14,0	1/1:22,0:22:5.99:81,6,0	0/1:16,0:18:35.35:399,0,35	0/0:30,0:32:27.03:0,27,509	0/0:15,0:15:24.08:0,24,548	0/0:19,0:19:24.06:0,24,501	1/1:18,0:19:11.71:243,12,0	1/1:13,0:16:10.50:177,10,0	1/1:28,0:30:26.57:714,27,0	0/0:14,0:13:1.35:0,1,237	1/1:13,0:13:12.04:296,12,0	0/1:13,0:13:3.96:58,0,4	1/1:16,0:15:10.24:200,10,0	1/1:20,2:22:20.50:484,21,0	1/1:34,0:31:5.90:87,6,0	1/1:23,0:26:9.83:226,10,0	1/1:14,0:14:2.84:61,3,0	0/0:21,0:22:2.34:0,2,11	1/1:15,0:17:12.04:299,12,0	1/1:25,1:26:25.40:642,25,0	1/1:12,7:29:22.20:561,22,0	1/1:15,0:14:27.09:814,27,0
chr10	102643164	.	G	GTGTGTGTG	3656.12	PASS	AB=1.000;AC=35;AF=0.648;AN=54;BaseQRankSum=1.013;DP=599;FS=0.733;HRun=0;HaplotypeScore=209.5691;InbreedingCoeff=0.3737;MQ=46.69;MQ0=19;MQRankSum=-2.804;QD=8.58;ReadPosRankSum=0.165;VQSLOD=2.4578;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:62.25:93,0,62	0/1:10,0:10:9.23:66,0,9	0/1:24,0:8:0:0,0,0	./.	0/0:17,0:17:18.06:0,18,377	1/1:21,0:20:9.50:128,9,0	1/1:29,0:28:7.34:45,7,0	0/1:19,0:19:0:0,0,0	0/1:16,0:16:41.34:257,0,41	0/0:34,0:34:27.03:0,27,509	0/0:17,0:17:24.08:0,24,548	0/0:19,0:19:24.02:0,24,501	1/1:14,0:13:2.68:11,3,0	1/1:16,0:15:10.52:177,11,0	1/1:28,0:28:10.58:214,11,0	0/1:16,0:15:47.31:47,0,235	1/1:15,0:14:9.03:234,9,0	0/1:9,0:9:8.53:58,0,9	1/1:12,0:11:10.24:158,10,0	1/1:24,0:24:14.87:327,15,0	1/1:32,0:29:6.02:87,6,0	1/1:24,0:24:5.89:164,6,0	0/0:19,0:19:1.84:0,2,8	0/0:19,0:19:2.26:0,2,16	1/1:18,0:18:9.03:189,9,0	1/1:24,7:31:29.81:546,30,0	1/1:29,0:29:10.16:347,10,0	1/1:14,0:13:21.07:509,21,0
chr10	102643213	.	C	CATAGATCCAAAGA	43278.60	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-1.214;DP=562;FS=7.406;HRun=0;HaplotypeScore=216.3778;InbreedingCoeff=0.9974;MQ=78.81;MQ0=0;MQRankSum=-17.166;QD=121.57;ReadPosRankSum=-3.985;VQSLOD=2.8925;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:16,13:30:69.13:3323,69,0	0/0:9,0:9:24.07:0,24,849	0/0:28,0:27:62.93:0,63,2067	0/0:37,0:31:83.05:0,83,2676	0/0:14,0:14:39.13:0,39,1478	1/1:7,6:12:36.12:1944,36,0	1/1:16,8:24:57.20:3016,57,0	1/1:34,1:35:93.32:5158,93,0	1/1:14,8:24:54.19:2728,54,0	0/0:30,0:30:87.29:0,87,3168	0/0:19,0:19:57.18:0,57,2048	0/0:18,0:18:48.16:0,48,1832	1/1:3,6:9:27.09:1540,27,0	1/1:9,6:16:35.12:1654,35,0	1/1:12,4:16:48.16:2025,48,0	0/0:13,0:13:36.12:0,36,1417	1/1:11,5:17:45.15:2419,45,0	1/1:4,4:7:18.06:1049,18,0	1/1:16,2:18:45.15:1826,45,0	1/1:9,15:25:66.18:3608,66,0	1/1:12,6:18:26.52:1356,27,0	1/1:13,8:21:54.03:2687,54,0	1/1:9,12:22:57.20:2883,57,0	1/1:10,3:15:20.50:769,20,0	1/1:7,14:21:54.19:3014,54,0	0/0:23,0:23:66.21:0,66,2436	1/1:13,9:22:45.07:2279,45,0	0/0:15,0:15:42.08:0,42,1204
chr10	102643950	.	GAGTGT	G	11787.28	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=18.545;DP=504;FS=2.373;HRun=0;HaplotypeScore=204.2173;InbreedingCoeff=0.9982;MQ=95.24;MQ0=0;MQRankSum=-18.135;QD=40.51;ReadPosRankSum=4.759;VQSLOD=4.4871;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:27:67.45:1079,67,0	0/0:10,0:10:30.10:0,30,998	0/0:38,0:38:99:0,114,3470	0/0:21,0:21:59.35:0,59,1630	0/0:23,0:23:66.23:0,66,2109	1/1:0,16:16:48.16:733,48,0	1/1:0,20:20:60.20:905,60,0	1/1:1,14:15:37.33:668,37,0	1/1:0,16:16:48.16:704,48,0	0/0:23,0:23:69.24:0,69,2273	0/0:16,0:16:48.15:0,48,1504	0/0:30,0:30:87.30:0,87,2846	1/1:1,17:21:57.18:832,57,0	1/1:1,18:19:51.17:763,51,0	1/1:0,18:18:54.18:815,54,0	0/0:22,0:22:66.23:0,66,2194	1/1:2,13:15:36.65:596,37,0	1/1:2,9:11:27.09:439,27,0	1/1:0,7:7:21.07:330,21,0	1/1:4,13:17:49.83:633,50,0	1/1:1,12:13:21.45:291,21,0	1/1:0,12:12:36.12:563,36,0	1/1:0,14:14:34.47:492,34,0	1/1:1,22:23:57.63:804,58,0	1/1:0,12:12:33.11:499,33,0	0/0:22,0:22:63.22:0,63,2071	1/1:1,14:15:42.14:642,42,0	0/0:8,0:8:24.08:0,24,687
chr10	102643956	.	CCTCCAG	C	13532.09	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=18.601;DP=489;FS=0.000;HRun=0;HaplotypeScore=203.7544;InbreedingCoeff=0.9973;MQ=94.27;MQ0=0;MQRankSum=-18.417;QD=49.03;ReadPosRankSum=4.116;VQSLOD=4.5396;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:69.24:1245,69,0	0/0:11,0:11:33.11:0,33,1182	0/0:36,0:36:99:0,105,3810	0/0:20,0:20:51.08:0,51,1777	0/0:22,0:22:66.23:0,66,2412	1/1:0,16:16:48.16:847,48,0	1/1:0,20:20:60.21:1048,60,0	1/1:0,14:14:42.14:774,42,0	1/1:0,16:16:48.16:819,48,0	0/0:27,0:27:81.28:0,81,3001	0/0:16,0:16:45.15:0,45,1657	0/0:29,0:29:84.29:0,84,3053	1/1:3,17:20:54.18:937,54,0	1/1:0,18:18:51.17:885,51,0	1/1:1,18:19:57.18:970,57,0	0/0:23,0:23:69.23:0,69,2481	1/1:0,13:13:39.13:692,39,0	1/1:0,9:9:27.09:502,27,0	1/1:0,7:7:21.07:380,21,0	1/1:0,13:13:39.13:664,39,0	1/1:0,12:12:21.17:316,21,0	1/1:0,12:12:36.12:647,36,0	1/1:0,14:14:35.55:574,36,0	1/1:0,22:22:55.39:915,55,0	1/1:0,12:12:33.11:577,33,0	0/0:23,0:23:69.24:0,69,2488	1/1:0,14:14:42.14:741,42,0	0/0:6,0:6:18.06:0,18,662
chr10	102644753	.	ATG	A	7521.30	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=2.334;DP=822;FS=4.920;HRun=0;HaplotypeScore=141.6603;InbreedingCoeff=0.9973;MQ=56.59;MQ0=5;MQRankSum=6.013;QD=21.55;ReadPosRankSum=2.932;VQSLOD=5.4823;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:31:45.14:585,45,0	0/0:21,0:21:57.17:0,57,926	0/0:32,0:12:32.90:0,33,492	0/0:31,0:15:31.62:0,32,453	0/0:37,0:37:70.08:0,70,1207	1/1:4,21:25:36.11:468,36,0	1/1:1,26:26:44.01:584,44,0	0/0:36,0:36:93.23:0,93,1425	1/1:3,28:31:44.86:584,45,0	0/0:27,0:27:78.26:0,78,1302	0/0:28,0:28:14.79:0,15,242	0/0:28,0:28:72.25:0,72,1222	1/1:6,17:23:30.10:390,30,0	1/1:0,26:26:54.18:702,54,0	1/1:4,28:32:54.18:702,54,0	0/0:33,0:33:71.92:0,72,1219	1/1:5,20:25:45.15:585,45,0	1/1:1,21:22:36.12:468,36,0	0/0:20,0:17:42.13:0,42,641	0/0:28,0:28:63.20:0,63,1033	0/0:53,1:54:99:0,99,2070	1/1:2,19:21:26.74:351,27,0	1/1:1,24:25:59.99:778,60,0	1/1:1,24:25:42.14:546,42,0	1/1:3,32:35:60.19:780,60,0	0/0:30,0:30:84.20:0,84,1323	0/0:38,0:38:99:0,105,1725	0/0:30,0:30:65.96:0,66,1075
chr10	102645974	.	GA	G	9804.95	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=9.533;DP=552;FS=23.697;HRun=8;HaplotypeScore=52.9143;InbreedingCoeff=0.9982;MQ=83.11;MQ0=0;MQRankSum=-2.756;QD=25.27;ReadPosRankSum=2.223;VQSLOD=3.3106;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:36:96.15:927,96,0	0/0:6,0:6:18.06:0,18,217	0/0:15,0:15:23.97:0,24,240	0/0:17,0:17:39.10:0,39,448	0/0:19,0:19:45.14:0,45,541	1/1:1,19:20:57.09:550,57,0	1/1:3,21:24:57.09:550,57,0	1/1:2,28:30:84.10:802,84,0	1/1:2,18:20:51.08:493,51,0	0/0:24,0:24:51.16:0,51,615	0/0:12,0:12:33.10:0,33,392	0/0:24,0:24:63.17:0,63,739	1/1:2,20:22:57.09:550,57,0	1/1:2,21:23:57.06:550,57,0	1/1:1,16:17:45.07:435,45,0	0/0:15,0:15:45.13:0,45,534	1/1:3,30:33:84.13:811,84,0	1/1:0,20:20:54.09:522,54,0	1/1:1,22:23:66.09:631,66,0	1/1:1,18:19:45.07:434,45,0	1/1:0,19:19:51.08:493,51,0	1/1:1,12:13:36.06:348,36,0	1/1:0,14:14:42.07:406,42,0	1/1:6,22:28:63.10:608,63,0	1/1:1,10:11:30.05:290,30,0	0/0:23,0:23:66.20:0,66,796	1/1:2,14:16:42.07:406,42,0	0/0:9,0:9:27.07:0,27,310
chr10	102647222	.	GT	G	5086.63	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.732;DP=662;FS=3.176;HRun=2;HaplotypeScore=90.2434;InbreedingCoeff=0.9847;MQ=86.66;MQ0=0;MQRankSum=-1.385;QD=40.05;ReadPosRankSum=-0.827;VQSLOD=4.5263;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,2099	0/0:6,0:6:18.06:0,18,288	0/0:21,0:21:63.21:0,63,971	0/0:23,0:23:69.08:0,69,952	0/0:34,0:34:99:0,102,1630	0/0:17,0:17:51.16:0,51,792	0/0:20,0:20:60.20:0,60,959	1/1:0,27:27:81.27:1129,81,0	0/0:26,0:26:78.27:0,78,1246	0/0:27,0:27:81.28:0,81,1294	0/0:17,0:17:51.17:0,51,815	0/0:26,0:26:78.27:0,78,1237	0/0:13,0:13:39.09:0,39,595	0/0:26,0:26:78.27:0,78,1243	0/0:12,0:12:36.12:0,36,573	0/0:33,0:33:99:0,99,1552	0/0:39,0:39:99:0,117,1812	0/0:24,0:24:72.24:0,72,1133	1/1:0,25:25:75.25:1041,75,0	1/1:0,21:21:57.19:782,57,0	1/1:0,34:34:96.32:1343,96,0	0/0:21,0:21:63.21:0,63,1007	0/0:26,0:26:75.26:0,75,1190	0/0:30,0:30:90.29:0,90,1412	0/0:18,0:18:54.16:0,54,838	0/0:28,0:28:84.28:0,84,1322	1/1:0,20:20:57.19:792,57,0	0/0:3,0:3:9.03:0,9,144
chr10	102647767	.	TAC	T	448.90	PASS	AB=0.969;AC=34;AF=0.654;AN=52;BaseQRankSum=5.588;DP=487;FS=1.993;HRun=0;HaplotypeScore=77.4165;InbreedingCoeff=0.1959;MQ=66.95;MQ0=5;MQRankSum=-5.096;QD=1.24;ReadPosRankSum=0.669;VQSLOD=1.7042;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:5.75:30,6,0	0/0:8,0:8:2.69:0,3,8	./.	./.	0/1:7,0:7:5.86:6,0,39	1/1:15,0:15:5.68:28,6,0	1/1:29,0:29:8.99:42,9,0	0/0:15,0:15:2.97:0,3,20	1/1:26,0:25:18.25:86,18,0	0/1:16,0:16:7.96:8,0,186	0/0:4,0:4:3.01:0,3,44	0/0:23,0:23:26.75:0,27,326	1/1:19,0:19:8.52:42,9,0	1/1:9,0:9:2.88:15,3,0	1/1:11,0:11:2.84:14,3,0	0/1:18,0:18:10.18:10,0,139	1/1:22,0:22:5.75:31,6,0	0/1:14,0:14:6.06:51,0,6	0/0:15,0:15:5.97:0,6,24	0/1:11,0:11:2.95:3,0,83	0/1:40,0:40:3.61:4,0,84	1/1:13,0:13:2.84:14,3,0	1/1:6,0:6:0.47:1,0,0	1/1:28,0:28:5.68:28,6,0	1/1:19,0:19:8.48:41,8,0	0/1:6,3:9:35.42:47,0,35	0/1:16,0:16:0.83:1,0,96	1/1:5,3:8:9.02:97,9,0
chr10	102647804	.	ACACACACACT	A	1736.05	PASS	AB=0.991;AC=21;AF=0.375;AN=56;BaseQRankSum=8.214;DP=639;FS=21.137;HRun=0;HaplotypeScore=147.1250;InbreedingCoeff=0.2273;MQ=61.97;MQ0=14;MQRankSum=-2.023;QD=5.28;ReadPosRankSum=-1.133;VQSLOD=1.3343;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:3.47:0,3,26	0/0:10,0:10:21.37:0,21,422	0/0:36,0:14:28.42:0,28,397	0/0:41,0:22:22.36:0,22,500	0/0:12,0:11:15.02:0,15,360	0/1:16,1:17:31.91:125,0,32	0/1:33,1:34:5.08:190,0,5	0/1:13,0:12:56.34:135,0,56	1/1:32,1:32:2.08:297,2,0	0/0:29,0:28:73.30:0,73,1646	0/0:9,0:9:23.96:0,24,336	0/0:28,0:28:65.57:0,66,2058	1/1:21,0:21:9.03:119,9,0	0/0:17,0:17:0.47:0,0,1	1/1:14,0:14:3.01:39,3,0	0/0:23,0:23:39.89:0,40,1362	0/0:29,0:29:9.44:0,9,71	0/1:20,0:20:99:176,0,149	0/1:20,0:20:99:135,0,325	0/1:17,0:17:69.93:70,0,655	0/1:45,0:45:99:224,0,574	1/1:22,0:22:2.96:39,3,0	0/1:10,0:10:3.05:75,0,3	1/1:21,1:22:8.44:161,8,0	1/1:19,0:19:9.02:117,9,0	0/0:20,0:20:53.47:0,53,1081	0/1:22,0:21:0.78:1,0,564	0/0:17,0:17:45.11:0,45,1085
chr10	102647806	.	ACACACACT	A	2851.60	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=7.828;DP=636;FS=15.506;HRun=0;HaplotypeScore=128.5253;InbreedingCoeff=0.4414;MQ=63.04;MQ0=13;MQRankSum=-1.857;QD=6.94;ReadPosRankSum=-0.163;VQSLOD=1.4805;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:38:5.99:51,6,0	0/0:9,0:9:20.90:0,21,330	0/0:37,0:16:27.60:0,28,427	0/0:40,0:23:25.29:0,25,519	0/0:14,0:13:20.96:0,21,311	1/1:5,12:17:6.02:149,6,0	1/1:7,26:33:15.05:353,15,0	0/1:14,0:13:28.57:152,0,29	1/1:9,23:31:20.88:554,21,0	0/0:27,0:26:74.92:0,75,1256	0/0:9,0:9:23.95:0,24,279	0/0:27,0:27:68.72:0,69,1651	1/1:0,21:21:9.03:253,9,0	1/1:17,0:17:2.75:25,3,0	1/1:4,10:14:3.01:84,3,0	0/0:23,0:23:36.78:0,37,1088	1/1:30,0:30:5.99:51,6,0	0/1:20,0:20:53.85:263,0,54	0/1:20,0:20:99:153,0,170	0/1:17,0:17:69.93:70,0,435	0/1:45,0:45:99:259,0,304	1/1:1,20:21:2.90:83,3,0	1/1:9,0:9:18.39:140,18,0	1/1:4,18:22:5.99:149,6,0	1/1:4,15:19:9.03:251,9,0	0/0:21,0:21:59.38:0,59,840	0/1:22,0:21:3.65:4,0,388	0/0:18,0:18:48.11:0,48,933
chr10	102647808	.	ACACACT	A	2704.24	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=8.446;DP=619;FS=13.376;HRun=0;HaplotypeScore=111.9390;InbreedingCoeff=0.5286;MQ=66.25;MQ0=13;MQRankSum=-1.712;QD=6.85;ReadPosRankSum=0.266;VQSLOD=1.5101;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,29:36:6.02:140,6,0	0/0:9,0:9:23.88:0,24,272	0/0:38,0:18:33.61:0,34,492	0/0:38,0:25:31.27:0,31,572	0/0:15,0:14:20.96:0,21,259	1/1:14,0:14:6.02:103,6,0	1/1:30,0:30:15.04:209,15,0	1/1:16,0:15:0.79:187,1,0	1/1:31,0:30:23.70:369,24,0	0/0:26,0:25:67.15:0,67,837	0/0:9,0:9:20.95:0,21,227	0/0:27,0:27:65.65:0,66,1283	1/1:21,0:21:9.03:155,9,0	1/1:2,14:16:2.96:70,3,0	1/1:12,0:12:3.01:51,3,0	0/0:24,0:24:17.76:0,18,877	1/1:2,27:29:6.02:140,6,0	1/1:20,0:20:31.19:419,31,0	0/1:22,0:22:80.51:200,0,81	0/1:18,0:18:90.83:91,0,215	0/1:43,0:43:99:303,0,105	1/1:20,0:20:2.97:51,3,0	1/1:8,0:8:15.86:115,16,0	1/1:21,0:21:6.02:103,6,0	1/1:15,0:15:9.03:153,9,0	0/0:21,0:21:30.07:0,30,609	0/1:23,0:22:44.30:44,0,204	0/0:17,0:17:48.06:0,48,695
chr10	102647814	.	TCA	T	3192.99	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=7.092;DP=602;FS=14.060;HRun=0;HaplotypeScore=80.3089;InbreedingCoeff=0.6910;MQ=70.86;MQ0=12;MQRankSum=-1.503;QD=8.63;ReadPosRankSum=1.711;VQSLOD=2.1198;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:5.42:23,5,0	0/0:10,0:10:24.03:0,24,347	0/0:42,0:22:54.16:0,54,1068	0/0:38,0:26:62.94:0,63,1044	0/0:14,0:13:14.21:0,14,338	1/1:13,0:13:5.42:23,5,0	1/1:28,0:28:8.84:35,9,0	1/1:2,15:16:42.10:588,42,0	1/1:27,0:27:18.27:78,18,0	0/0:22,0:21:50.72:0,51,781	0/0:7,0:7:21.05:0,21,310	0/0:25,0:25:62.75:0,63,1050	1/1:21,0:21:8.04:36,8,0	1/1:15,0:15:2.35:11,2,0	0/1:13,0:13:5.54:6,0,19	0/0:23,0:23:60.43:0,60,946	0/1:28,0:28:13.59:14,0,14	1/1:18,0:18:1.23:9,1,0	1/1:1,23:24:61.34:794,61,0	1/1:19,0:19:49.84:602,50,0	1/1:39,0:39:74.32:970,74,0	1/1:20,0:20:2.74:12,3,0	0/0:7,0:7:1.31:0,1,5	1/1:19,0:19:5.49:23,5,0	1/1:15,0:15:8.02:33,8,0	0/0:26,0:26:71.87:0,72,1120	1/1:21,0:20:12.41:137,12,0	0/0:18,0:18:47.46:0,47,614
chr10	102647816	.	ACT	A	922.09	PASS	AB=0.606;AC=9;AF=0.161;AN=56;BaseQRankSum=6.014;DP=595;FS=1.725;HRun=0;HaplotypeScore=88.0516;InbreedingCoeff=0.6125;MQ=72.20;MQ0=12;MQRankSum=2.707;QD=8.02;ReadPosRankSum=1.723;VQSLOD=3.0859;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:1.72:0,2,4	0/0:9,0:9:24.08:0,24,426	0/0:43,0:23:69.11:0,69,1181	0/0:39,0:27:68.07:0,68,1199	0/0:15,0:14:24.08:0,24,417	0/0:13,0:13:2.49:0,2,6	0/0:28,0:28:12.85:0,13,87	1/1:17,0:16:17.81:215,18,0	0/0:28,0:28:18.59:0,19,117	0/0:19,0:18:45.15:0,45,810	0/0:7,0:7:18.06:0,18,335	0/0:24,0:24:59.93:0,60,1119	0/0:21,0:21:3.67:0,4,10	0/0:16,0:16:7.23:0,7,51	0/0:12,0:12:4.26:0,4,46	0/0:23,0:23:63.17:0,63,1097	0/0:28,0:28:5.14:0,5,47	0/0:18,0:18:52.83:0,53,349	1/1:24,0:24:44.90:285,45,0	1/1:18,0:18:2.97:167,3,0	1/1:36,0:36:22.43:364,22,0	0/0:20,0:20:0.66:0,1,2	0/0:7,0:7:14.85:0,15,105	0/0:20,0:20:5.33:0,5,50	0/0:17,0:17:10.36:0,10,80	0/0:26,0:26:75.24:0,75,1302	0/1:7,13:19:40.80:41,0,59	0/0:18,0:18:51.15:0,51,831
chr10	102648546	.	GTTTT	G	2572.24	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.387;DP=586;FS=0.000;HRun=13;HaplotypeScore=117.1930;InbreedingCoeff=0.9750;MQ=69.12;MQ0=0;MQRankSum=-8.120;QD=24.27;ReadPosRankSum=3.177;VQSLOD=2.3840;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:40:51.17:0,51,950	0/0:6,0:7:18.06:0,18,374	0/0:16,0:15:27.04:0,27,491	0/0:13,0:11:19.61:0,20,361	0/0:28,0:32:79.99:0,80,1724	0/0:8,0:31:48.05:0,48,773	0/0:6,0:16:30.10:0,30,530	1/1:10,18:28:54.09:790,54,0	0/0:8,0:25:30.09:0,30,541	0/0:23,0:27:72.15:0,72,1421	0/0:22,0:22:60.18:0,60,1253	0/0:10,0:14:30.09:0,30,587	0/0:6,0:21:24.07:0,24,426	0/0:4,0:13:12.03:0,12,200	0/0:6,0:28:48.10:0,48,859	0/0:19,0:22:60.20:0,60,1305	0/0:9,0:24:33.58:0,34,643	0/0:3,0:17:27.04:0,27,430	1/1:4,16:20:48.14:695,48,0	1/1:4,11:15:24.01:351,24,0	1/1:7,20:27:24.89:385,25,0	0/0:5,0:15:36.10:0,36,601	0/0:6,0:21:24.42:0,24,454	0/0:6,0:21:12.70:0,13,251	0/0:1,0:21:21.07:0,21,400	0/0:5,0:24:55.86:0,56,370	1/1:4,12:16:36.08:526,36,0	0/0:2,0:10:13.60:0,14,124
chr10	102649238	.	ACTAACGCTTATCGCCGGCATCGTAGGCACCC	A	5551.50	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=8.518;DP=632;FS=0.744;HRun=0;HaplotypeScore=495.4368;InbreedingCoeff=0.9426;MQ=80.51;MQ0=0;MQRankSum=-5.940;QD=115.66;ReadPosRankSum=3.335;VQSLOD=3.6760;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,166,18838	0/0:9,0:9:27.09:0,27,3291	0/0:23,0:23:55.36:0,55,3878	0/0:14,0:14:39.12:0,39,2160	0/0:24,0:24:69.19:0,69,7634	0/0:26,0:26:69.24:0,69,8088	0/0:33,0:33:96.33:0,96,9637	./.	0/0:34,0:34:99:0,99,10923	0/0:29,0:29:84.29:0,84,9751	0/0:19,0:19:54.16:0,54,6284	0/0:26,0:26:78.25:0,78,9074	0/0:19,0:19:57.20:0,57,7069	0/0:18,0:18:54.19:0,54,6599	0/0:22,0:22:66.23:0,66,8348	0/0:20,0:20:60.21:0,60,6688	0/0:35,0:35:99:0,105,12471	0/0:23,0:23:69.24:0,69,8659	1/1:7,5:12:15.05:826,15,0	1/1:5,12:17:30.10:2258,30,0	1/1:3,3:6:3.01:247,3,0	0/0:22,0:22:66.16:0,66,5810	0/0:12,0:12:36.12:0,36,4410	0/0:45,0:44:99:0,135,16126	0/0:19,0:19:54.17:0,54,6228	0/0:31,0:31:90.31:0,90,11749	1/1:5,8:13:27.09:2221,27,0	0/0:7,0:7:21.07:0,21,1954
chr10	102650141	.	CT	C	3591.21	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.089;DP=624;FS=15.220;HRun=2;HaplotypeScore=95.3985;InbreedingCoeff=0.9925;MQ=80.23;MQ0=0;MQRankSum=-0.621;QD=35.91;ReadPosRankSum=-1.412;VQSLOD=1.7466;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,129,1931	0/0:14,0:14:42.14:0,42,627	0/0:29,0:29:78.26:0,78,1137	0/0:14,0:14:33.10:0,33,438	0/0:16,0:16:48.16:0,48,719	0/0:21,0:21:63.21:0,63,942	0/0:30,0:30:81.20:0,81,1148	1/1:0,25:25:72.22:920,72,0	0/0:29,0:29:81.22:0,81,1185	0/0:20,0:20:60.20:0,60,899	0/0:16,0:16:48.16:0,48,719	0/0:27,0:27:75.23:0,75,1086	0/0:26,0:26:78.23:0,78,1137	0/0:30,0:30:84.22:0,84,1203	0/0:26,0:26:72.21:0,72,1054	0/0:13,0:13:39.13:0,39,582	0/0:25,0:25:57.18:0,57,849	0/0:25,0:25:72.24:0,72,1071	1/1:0,22:22:66.20:841,66,0	1/1:0,19:19:54.18:700,54,0	1/1:1,20:21:48.16:623,48,0	0/0:13,0:13:27.09:0,27,404	0/0:14,0:14:42.14:0,42,629	0/0:25,0:25:63.21:0,63,943	0/0:17,0:17:39.08:0,39,541	0/0:37,0:37:99:0,108,1556	1/1:0,13:13:39.13:506,39,0	0/0:4,0:4:12.04:0,12,180
chr10	102650203	.	A	ACGGTGC	21702.33	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-0.211;DP=568;FS=1.787;HRun=0;HaplotypeScore=125.8437;InbreedingCoeff=0.9731;MQ=76.47;MQ0=0;MQRankSum=-15.644;QD=55.93;ReadPosRankSum=1.850;VQSLOD=5.1337;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,22:35:51.17:1737,51,0	0/0:8,0:8:21.07:0,21,469	0/0:17,0:17:33.11:0,33,644	0/0:19,0:19:26.45:0,26,641	0/0:18,0:18:42.13:0,42,854	1/1:6,13:19:42.14:1389,42,0	1/1:10,12:23:45.15:1408,45,0	1/1:14,5:20:27.08:747,27,0	1/1:7,19:26:66.23:2142,66,0	0/0:28,0:28:60.20:0,60,1261	0/0:16,0:16:42.14:0,42,925	0/0:25,0:25:66.23:0,66,1421	1/1:6,5:11:21.07:689,21,0	1/1:8,15:23:42.14:1383,42,0	1/1:7,23:32:72.25:2432,72,0	0/0:16,0:16:39.13:0,39,832	1/1:9,15:30:39.13:1301,39,0	1/1:10,14:27:49.41:1490,49,0	1/1:9,5:14:15.05:513,15,0	1/1:11,14:25:45.15:1527,45,0	1/1:11,9:20:33.03:844,33,0	1/1:8,4:13:12.04:410,12,0	1/1:4,5:9:15.05:511,15,0	1/1:12,14:27:27.09:890,27,0	1/1:6,11:18:27.09:875,27,0	0/0:28,0:28:66.21:0,66,1374	1/1:3,12:15:45.15:1415,45,0	0/0:5,0:5:6.02:0,6,134
chr10	102650877	.	AGTT	A	12168.62	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=13.952;DP=473;FS=0.741;HRun=0;HaplotypeScore=93.4706;InbreedingCoeff=0.9926;MQ=81.57;MQ0=0;MQRankSum=-7.122;QD=42.40;ReadPosRankSum=2.635;VQSLOD=6.2886;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:42.14:699,42,0	0/0:8,0:8:24.08:0,24,539	0/0:21,0:21:54.15:0,54,987	0/0:10,0:10:24.04:0,24,496	0/0:24,0:24:72.25:0,72,1600	1/1:2,13:15:39.13:649,39,0	1/1:2,21:23:51.17:849,51,0	1/1:6,20:26:57.17:898,57,0	1/1:2,19:21:54.18:898,54,0	0/0:31,0:31:93.32:0,93,2096	0/0:25,0:25:75.23:0,75,1610	0/0:11,0:11:33.11:0,33,744	1/1:1,8:9:24.08:400,24,0	1/1:0,4:4:12.04:200,12,0	1/1:0,19:19:51.17:849,51,0	0/0:13,0:13:36.12:0,36,816	1/1:0,16:16:42.14:699,42,0	1/1:0,17:17:45.15:749,45,0	1/1:0,19:19:57.19:931,57,0	1/1:1,22:23:54.18:899,54,0	1/1:0,7:7:18.06:300,18,0	1/1:0,8:8:21.07:350,21,0	1/1:1,14:15:36.12:600,36,0	1/1:0,16:16:42.05:699,42,0	1/1:2,12:14:36.12:600,36,0	0/0:31,0:31:87.30:0,87,1972	1/1:0,21:21:53.95:899,54,0	0/0:12,0:12:36.12:0,36,809
chr10	102652008	.	TAAAATAAAA	T	4393.86	PASS	AB=0.995;AC=26;AF=0.464;AN=56;BaseQRankSum=-0.137;DP=229;FS=0.572;HRun=0;HaplotypeScore=76.2134;InbreedingCoeff=0.1782;MQ=71.68;MQ0=1;MQRankSum=1.264;QD=28.53;ReadPosRankSum=-1.194;VQSLOD=3.9920;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:6:73.88:74,0,113	0/0:6,0:6:18.04:0,18,463	0/0:8,0:8:18.06:0,18,369	0/0:9,0:8:14.99:0,15,275	0/0:12,0:12:33.10:0,33,1122	0/1:8,0:8:99:153,0,166	1/1:1,0:1:3:25,3,0	1/1:2,28:29:66.33:1418,66,0	0/1:10,0:10:99:237,0,101	0/0:12,0:12:36.11:0,36,702	0/0:3,0:3:9.01:0,9,84	0/0:7,0:7:21.07:0,21,774	0/1:5,0:5:66.91:67,0,108	0/1:4,0:4:54.29:135,0,54	1/1:4,0:4:9.02:147,9,0	0/0:5,0:5:14.99:0,15,233	0/1:18,0:18:99:240,0,329	0/1:18,0:18:80.55:544,0,81	1/1:5,0:5:15.05:316,15,0	0/1:8,0:8:99:184,0,220	1/1:4,0:4:12.01:170,12,0	1/1:6,0:6:18:221,18,0	1/1:0,6:6:2.53:16,3,0	1/1:6,0:6:15:189,15,0	0/1:8,0:8:68.82:69,0,252	0/0:10,0:10:25.49:0,25,381	0/1:6,0:6:99:191,0,104	0/0:3,0:3:4.43:0,4,91
chr10	102652013	.	TA	T	3131.78	PASS	AC=32;AF=0.593;AN=54;BaseQRankSum=4.439;DP=204;FS=10.832;HRun=4;HaplotypeScore=40.0425;InbreedingCoeff=0.8018;MQ=68.83;MQ0=1;MQRankSum=0.746;QD=23.55;ReadPosRankSum=1.329;VQSLOD=1.7547;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:6:9.03:108,9,0	0/0:5,0:5:12.04:0,12,167	0/0:6,0:6:12.04:0,12,166	0/0:8,0:7:9.03:0,9,125	0/0:11,0:11:30.09:0,30,396	1/1:0,7:7:15.05:180,15,0	./.	1/1:32,0:31:65.78:777,66,0	1/1:0,9:9:18.06:216,18,0	0/0:11,0:11:26.52:0,27,265	0/0:2,0:2:3.01:0,3,41	0/0:6,0:6:18.06:0,18,251	1/1:0,4:4:9.03:108,9,0	1/1:0,3:3:9.03:108,9,0	1/1:0,3:3:6.02:72,6,0	0/0:3,0:3:9.02:0,9,107	1/1:2,13:15:30.09:360,30,0	1/1:7,11:17:8.22:356,8,0	1/1:0,5:5:15.05:180,15,0	1/1:1,7:8:21.06:252,21,0	1/1:0,2:2:6.02:72,6,0	1/1:1,2:3:6.02:72,6,0	0/0:6,0:6:0:0,0,0	1/1:1,3:4:6.02:72,6,0	1/1:0,8:8:18.06:216,18,0	0/0:10,0:10:26.52:0,27,253	1/1:0,6:6:15.05:180,15,0	0/0:3,0:3:7.82:0,8,62
chr10	102652014	.	AAAAT	A	215.02	PASS	AC=6;AF=0.158;AN=38;BaseQRankSum=3.173;DP=207;FS=2.576;HRun=0;HaplotypeScore=62.9473;InbreedingCoeff=0.6188;MQ=68.42;MQ0=1;MQRankSum=-2.288;QD=8.60;ReadPosRankSum=-0.615;VQSLOD=2.0003;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:6.02:0,6,66	0/0:4,0:4:6.02:0,6,120	./.	./.	0/0:11,0:11:21.07:0,21,421	0/0:7,0:7:9.02:0,9,99	./.	0/0:33,0:32:12.04:0,12,139	0/0:10,0:10:9.03:0,9,102	1/1:8,4:11:12.04:175,12,0	0/0:2,0:2:3.01:0,3,36	0/0:6,0:6:12.04:0,12,282	0/0:4,0:4:6.02:0,6,66	0/0:3,0:3:3.01:0,3,33	./.	./.	0/0:15,0:15:18.05:0,18,199	0/0:18,0:17:17.89:0,18,180	./.	0/0:9,0:9:12.03:0,12,133	./.	./.	0/0:6,0:6:0:0,0,0	./.	0/0:8,0:8:15.04:0,15,166	1/1:10,0:10:20.22:119,20,0	0/0:6,0:6:6.02:0,6,66	1/1:3,0:3:5.89:39,6,0
chr10	102652018	.	T	TA	227.43	PASS	AB=1.000;AC=6;AF=0.111;AN=54;BaseQRankSum=4.341;DP=201;FS=8.548;HRun=4;HaplotypeScore=50.1552;InbreedingCoeff=0.4453;MQ=64.98;MQ0=2;MQRankSum=-3.960;QD=8.12;ReadPosRankSum=0.668;VQSLOD=-0.2449;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:9.02:0,9,93	0/0:4,0:4:9.03:0,9,108	0/0:4,0:4:9.02:0,9,99	0/0:7,0:6:9.03:0,9,106	0/0:10,0:10:30.08:0,30,348	0/0:10,0:10:24.02:0,24,236	./.	0/0:34,0:33:72.65:0,73,674	0/0:10,0:10:21.04:0,21,215	0/1:10,0:9:55.02:55,0,165	0/0:1,0:1:3.01:0,3,36	0/0:7,0:7:21.04:0,21,229	0/0:4,0:4:9.02:0,9,91	0/0:3,0:3:5.99:0,6,50	0/0:2,0:2:6.01:0,6,62	0/0:2,0:2:3.01:0,3,36	0/0:13,0:13:30.06:0,30,310	0/0:20,0:19:56.82:0,57,565	0/0:6,0:5:15.04:0,15,165	0/0:8,0:8:19.28:0,19,188	0/0:2,0:2:6.01:0,6,57	0/0:2,0:2:3:0,3,29	0/1:5,0:5:0:0,0,0	0/0:3,0:3:6.01:0,6,59	0/0:8,0:8:18.04:0,18,191	1/1:6,4:10:23.68:205,24,0	0/0:7,0:7:15.01:0,15,150	1/1:1,2:3:9:87,9,0
chr10	102652019	.	AAAT	A	378.95	PASS	AB=1.000;AC=5;AF=0.093;AN=54;BaseQRankSum=4.103;DP=203;FS=3.868;HRun=0;HaplotypeScore=57.2209;InbreedingCoeff=0.4649;MQ=64.73;MQ0=2;MQRankSum=-3.242;QD=16.48;ReadPosRankSum=1.736;VQSLOD=2.8975;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:12.03:0,12,189	0/0:3,0:3:9.03:0,9,174	0/0:4,0:4:9.02:0,9,99	0/0:7,0:6:9.03:0,9,106	0/0:10,0:10:30.09:0,30,577	0/0:10,0:10:24.08:0,24,428	./.	0/0:37,0:36:81.63:0,82,957	0/0:10,0:10:21.05:0,21,303	0/1:10,0:9:6.64:7,0,147	0/0:1,0:1:3.01:0,3,66	0/0:7,0:7:21.06:0,21,397	0/0:4,0:4:9.02:0,9,157	0/0:3,0:3:6:0,6,78	0/0:2,0:2:6.01:0,6,59	0/0:2,0:2:3.01:0,3,36	0/0:13,0:13:33.09:0,33,532	0/0:20,0:19:57.12:0,57,774	0/0:6,0:5:15.03:0,15,155	0/0:8,0:8:19.29:0,19,316	0/0:2,0:2:6.01:0,6,56	0/0:2,0:2:3:0,3,28	0/0:5,0:5:0:0,0,0	0/0:3,0:3:6.01:0,6,57	0/0:8,0:8:18.06:0,18,354	1/1:6,4:10:24.08:356,24,0	0/0:7,0:7:18.02:0,18,246	1/1:2,1:3:9.03:132,9,0
chr10	102652023	.	AAAT	A	254.19	PASS	AB=1.000;AC=5;AF=0.104;AN=48;BaseQRankSum=4.319;DP=180;FS=1.031;HRun=0;HaplotypeScore=54.8142;InbreedingCoeff=0.4771;MQ=61.24;MQ0=3;MQRankSum=-2.836;QD=12.71;ReadPosRankSum=1.300;VQSLOD=3.1988;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:9.03:0,9,168	0/0:3,0:3:9.03:0,9,174	0/0:2,0:2:6.02:0,6,72	0/0:6,0:5:6.02:0,6,72	0/0:9,0:9:27.09:0,27,554	0/0:10,0:10:24.08:0,24,456	./.	0/0:35,0:34:73.47:0,73,1022	0/0:8,0:8:12.04:0,12,236	0/1:9,0:8:9.64:10,0,123	0/0:2,0:2:6.02:0,6,103	0/0:5,0:5:15.05:0,15,337	0/0:2,0:2:6.02:0,6,132	0/0:1,0:1:3.01:0,3,66	0/0:2,0:2:3.01:0,3,36	./.	0/0:13,0:13:36.12:0,36,613	0/0:19,0:18:51.16:0,51,816	0/0:7,0:5:15.02:0,15,158	0/0:5,0:5:15.04:0,15,291	./.	./.	0/0:5,0:5:0:0,0,0	0/0:3,0:3:6.02:0,6,72	0/0:8,0:8:18.06:0,18,367	1/1:5,3:8:24.06:265,24,0	0/0:8,0:8:21.07:0,21,312	1/1:2,1:3:9.02:94,9,0
chr10	102652027	.	AAATAAAT	A	558.81	PASS	AC=4;AF=0.083;AN=48;BaseQRankSum=4.502;DP=174;FS=2.485;HRun=0;HaplotypeScore=66.3002;InbreedingCoeff=0.5845;MQ=57.09;MQ0=3;MQRankSum=-5.040;QD=42.99;ReadPosRankSum=0.050;VQSLOD=3.3984;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:12.04:0,12,306	0/0:3,0:3:9.03:0,9,246	0/0:2,0:2:6:0,6,54	0/0:5,0:3:6.02:0,6,71	0/0:10,0:10:24.08:0,24,828	0/0:10,0:10:24.08:0,24,657	./.	0/0:34,0:33:78.25:0,78,1359	0/0:6,0:6:12.04:0,12,362	0/0:8,0:7:21.02:0,21,233	0/0:2,0:2:6.02:0,6,169	0/0:5,0:5:15.05:0,15,576	0/0:2,0:2:6.02:0,6,205	0/0:1,0:1:3.01:0,3,102	0/0:1,0:1:3.01:0,3,36	./.	0/0:14,0:14:39.13:0,39,957	0/0:19,0:18:45.15:0,45,1087	0/0:6,0:4:9.03:0,9,108	0/0:5,0:5:15.04:0,15,437	./.	./.	0/0:2,0:2:0:0,0,0	0/0:3,0:3:6.02:0,6,66	0/0:9,0:9:21.07:0,21,583	1/1:5,3:9:27.09:479,27,0	0/0:8,0:8:21.07:0,21,440	1/1:3,1:4:12.04:191,12,0
chr10	102652031	.	AAAT	A	473.13	PASS	AB=1.000;AC=5;AF=0.104;AN=48;BaseQRankSum=4.086;DP=171;FS=3.384;HRun=0;HaplotypeScore=49.2319;InbreedingCoeff=0.4290;MQ=59.33;MQ0=3;MQRankSum=-2.961;QD=20.57;ReadPosRankSum=0.729;VQSLOD=3.2658;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:12.04:0,12,204	0/0:3,0:3:9.03:0,9,174	0/0:0,0:1:2.84:0,3,14	0/0:4,0:2:3.01:0,3,36	0/0:8,0:8:24.08:0,24,518	0/0:10,0:10:24.06:0,24,444	./.	0/0:31,0:30:81.22:0,81,1106	0/0:6,0:6:12.04:0,12,236	0/1:9,0:8:9.64:10,0,123	0/0:3,0:3:9.03:0,9,139	0/0:5,0:5:15.05:0,15,337	0/0:2,0:2:6.02:0,6,132	0/0:1,0:1:3.01:0,3,66	0/0:1,0:1:3.01:0,3,36	./.	0/0:14,0:14:39.12:0,39,644	0/0:20,0:19:54.17:0,54,879	0/0:6,0:4:12.03:0,12,139	0/0:5,0:5:15.05:0,15,300	./.	./.	0/0:2,0:2:3.01:0,3,36	0/0:3,0:3:3.01:0,3,36	0/0:9,0:9:21.07:0,21,403	1/1:6,4:10:30.10:424,30,0	0/0:8,0:8:21.06:0,21,308	1/1:3,1:4:12.04:157,12,0
chr10	102652153	.	ACACAGCGCGCG	A	3092.19	PASS	AB=1.000;AC=33;AF=0.635;AN=52;BaseQRankSum=5.330;DP=380;FS=1.612;HRun=0;HaplotypeScore=98.2891;InbreedingCoeff=0.4024;MQ=57.95;MQ0=16;MQRankSum=-6.466;QD=10.04;ReadPosRankSum=0.758;VQSLOD=2.0020;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:0.47:1,0,0	0/0:5,0:5:12.04:0,12,553	0/1:31,0:13:60.77:61,0,382	0/1:37,0:19:99:287,0,896	0/0:6,0:6:12.04:0,12,500	1/1:16,0:16:4.13:45,4,0	0/0:11,0:11:0:0,0,0	1/1:18,0:18:42.13:940,42,0	1/1:14,0:14:13.16:180,13,0	0/0:11,0:11:27.09:0,27,1164	0/0:8,0:8:18.04:0,18,718	0/0:14,0:14:36.12:0,36,1496	1/1:13,0:13:5.88:44,6,0	1/1:15,0:13:5.85:74,6,0	1/1:11,0:11:5.31:30,5,0	0/1:8,0:8:19.50:20,0,595	1/1:14,0:14:10.96:191,11,0	1/1:16,0:16:8.86:111,9,0	1/1:3,5:7:15.02:387,15,0	./.	1/1:24,0:23:6.01:109,6,0	1/1:10,0:10:5.81:63,6,0	0/1:6,0:6:0:0,0,0	1/1:21,0:20:2.90:16,3,0	./.	0/1:14,0:14:99:101,0,1019	1/1:3,15:16:17.90:596,18,0	0/0:6,0:6:3.01:0,3,48
chr10	102652155	.	ACAGCGCGCG	A	3778.45	PASS	AB=1.000;AC=32;AF=0.615;AN=52;BaseQRankSum=5.236;DP=377;FS=1.605;HRun=0;HaplotypeScore=86.4869;InbreedingCoeff=0.4105;MQ=55.05;MQ0=16;MQRankSum=-6.554;QD=12.35;ReadPosRankSum=0.871;VQSLOD=1.9677;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:0:0,0,0	0/0:5,0:5:12.04:0,12,505	0/1:31,0:13:60.77:61,0,378	0/1:34,0:16:99:287,0,870	0/0:6,0:6:12.04:0,12,454	1/1:15,0:15:4.90:151,5,0	0/0:11,0:11:0:0,0,0	1/1:17,0:17:42.13:952,42,0	1/1:12,0:13:17.69:284,18,0	0/0:11,0:11:30.10:0,30,1141	0/0:8,0:8:17.73:0,18,620	0/0:13,0:13:36.12:0,36,1380	1/1:11,1:12:6.02:103,6,0	1/1:14,2:14:6.02:124,6,0	1/1:11,0:11:5.69:95,6,0	0/1:8,0:8:62.07:62,0,543	1/1:14,0:14:11.59:249,12,0	1/1:1,14:15:9.03:228,9,0	1/1:8,0:7:15.02:331,15,0	./.	1/1:27,0:26:6.49:120,6,0	1/1:9,1:10:5.98:133,6,0	0/1:6,0:6:0:0,0,0	1/1:23,0:22:3.01:49,3,0	./.	0/1:14,0:14:99:117,0,880	1/1:18,0:16:18.01:434,18,0	0/0:4,0:4:2.96:0,3,19
chr10	102652157	.	AGCGCGCG	A	4267.58	PASS	AB=0.765;AC=32;AF=0.615;AN=52;BaseQRankSum=4.456;DP=359;FS=2.558;HRun=0;HaplotypeScore=74.4054;InbreedingCoeff=0.4107;MQ=53.60;MQ0=16;MQRankSum=-7.021;QD=14.77;ReadPosRankSum=0.837;VQSLOD=3.5952;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:1,12:13:0:0,0,0	0/0:4,0:4:12.04:0,12,463	0/1:28,1:12:60.77:61,0,370	0/1:28,5:15:99:287,0,853	0/0:5,0:5:12.04:0,12,413	1/1:1,13:15:4.55:325,5,0	0/0:0,11:11:0:0,0,0	1/1:0,15:15:45.13:990,45,0	1/1:2,12:14:18.01:374,18,0	0/0:10,0:10:30.10:0,30,1068	0/0:8,0:8:18.02:0,18,556	0/0:15,0:15:39.13:0,39,1451	1/1:1,11:12:6.02:166,6,0	1/1:2,13:14:6.02:158,6,0	1/1:0,10:10:5.86:167,6,0	0/1:7,0:8:62.07:62,0,506	1/1:0,12:12:12:330,12,0	1/1:14,1:15:9.03:206,9,0	1/1:5,0:5:15.02:303,15,0	./.	1/1:0,22:23:6.49:129,6,0	1/1:1,9:10:5.98:145,6,0	0/1:0,5:5:0:0,0,0	1/1:0,19:19:3.01:84,3,0	./.	0/1:12,2:14:99:118,0,765	1/1:16,0:16:18.06:364,18,0	0/0:4,0:4:2.99:0,3,23
chr10	102652162	.	G	GCA	79.43	PASS	AB=1.000;AC=5;AF=0.104;AN=48;BaseQRankSum=1.107;DP=360;FS=1.387;HRun=0;HaplotypeScore=76.0329;InbreedingCoeff=0.1676;MQ=50.14;MQ0=17;MQRankSum=0.695;QD=1.50;ReadPosRankSum=-1.826;VQSLOD=1.3246;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:0:0,0,0	0/0:5,0:5:15.01:0,15,195	0/0:26,0:7:3.11:0,3,106	0/0:30,0:12:31.74:0,32,320	0/0:4,0:4:9.03:0,9,131	0/0:15,0:15:11.32:0,11,55	./.	0/0:15,0:15:20.28:0,20,60	0/1:14,0:14:13.25:13,0,21	0/0:13,0:13:35.90:0,36,460	0/0:9,0:9:15.05:0,15,206	0/0:15,0:15:14.55:0,15,166	0/0:12,0:12:4.09:0,4,17	0/1:17,0:14:8.02:19,0,8	0/0:10,0:10:5.43:0,5,26	0/0:7,0:7:14.91:0,15,155	0/0:12,0:12:8.03:0,8,33	0/0:15,0:15:8.52:0,9,42	0/0:6,0:5:10.30:0,10,43	./.	0/0:24,0:23:2.03:0,2,5	0/0:10,0:10:5.68:0,6,28	./.	0/0:20,0:19:2.80:0,3,13	./.	0/1:17,0:17:20.61:106,0,21	0/0:17,0:16:14.99:0,15,71	1/1:1,4:5:3.01:45,3,0
chr10	102652688	.	T	TG	1012.68	PASS	AB=0.843;AC=19;AF=0.365;AN=52;BaseQRankSum=4.440;DP=450;FS=11.795;HRun=2;HaplotypeScore=65.8723;InbreedingCoeff=0.4160;MQ=38.38;MQ0=48;MQRankSum=-2.528;QD=4.44;ReadPosRankSum=1.617;VQSLOD=-0.6421;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,1:28:20.23:205,20,0	0/0:11,0:11:22.10:0,22,122	./.	./.	0/0:25,0:23:49.92:0,50,338	1/1:13,0:10:5.52:94,6,0	0/1:9,9:17:16.22:74,0,16	0/0:25,0:24:48:0,48,330	0/1:8,0:8:0.63:53,0,1	0/0:16,0:15:23.72:0,24,174	0/0:15,0:15:40.35:0,40,246	0/0:12,0:13:21.99:0,22,122	1/1:10,0:9:20.58:136,21,0	0/1:16,0:13:53.37:53,0,59	0/1:6,10:16:20.09:20,0,46	0/0:24,0:23:52.36:0,52,319	0/1:26,0:25:6.49:135,0,6	0/1:21,0:18:22.39:122,0,22	0/0:18,0:17:35.79:0,36,238	0/0:13,0:14:30.51:0,31,188	0/0:10,0:6:3.44:0,3,21	1/1:15,0:14:23.98:155,24,0	0/1:9,14:20:7.58:16,0,8	1/1:8,5:7:2.75:16,3,0	1/1:13,0:11:20.78:111,21,0	0/0:18,0:17:46.86:0,47,295	0/0:9,0:8:11.84:0,12,61	0/0:14,0:11:29.08:0,29,190
chr10	102652927	.	TA	T	13519.90	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=18.389;DP=609;FS=2.326;HRun=2;HaplotypeScore=159.9560;InbreedingCoeff=0.9973;MQ=92.01;MQ0=0;MQRankSum=-9.330;QD=33.06;ReadPosRankSum=2.796;VQSLOD=4.4782;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,40:42:99:1323,102,0	0/0:5,0:5:15.05:0,15,225	0/0:26,0:26:78.15:0,78,1116	0/0:34,0:34:93.27:0,93,1344	0/0:21,0:21:60.20:0,60,899	1/1:0,15:15:42.14:545,42,0	1/1:0,28:28:78.25:1011,78,0	1/1:1,32:33:96.31:1245,96,0	1/1:0,15:15:39.13:506,39,0	0/0:21,0:21:63.21:0,63,918	0/0:10,0:10:27.08:0,27,385	0/0:20,0:20:54.18:0,54,808	1/1:1,23:23:60.20:778,60,0	1/1:2,23:25:60.20:778,60,0	1/1:0,28:28:78.25:1011,78,0	0/0:26,1:27:39.40:0,39,1085	1/1:3,23:26:57.18:739,57,0	1/1:1,22:23:63.20:814,63,0	1/1:0,16:16:48.13:607,48,0	1/1:0,11:11:30.10:389,30,0	1/1:0,15:15:36.12:467,36,0	1/1:0,16:16:39.13:506,39,0	1/1:1,27:27:60.17:778,60,0	1/1:0,25:25:56.66:738,57,0	1/1:1,14:15:39.13:506,39,0	0/0:20,0:20:57.18:0,57,836	1/1:2,22:24:60.20:778,60,0	0/0:16,0:16:48.13:0,48,679
chr10	102653253	.	GTGGTGGTGA	G	8209.81	PASS	AB=0.819;AC=38;AF=0.679;AN=56;BaseQRankSum=9.527;DP=635;FS=0.845;HRun=0;HaplotypeScore=154.4227;InbreedingCoeff=0.7581;MQ=62.87;MQ0=40;MQRankSum=-9.739;QD=19.88;ReadPosRankSum=3.229;VQSLOD=4.0022;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,19:21:11.70:133,12,0	0/0:12,0:11:24.08:0,24,828	0/0:31,0:25:62.83:0,63,1173	0/0:30,0:25:44.39:0,44,1170	0/0:31,0:31:75.19:0,75,2372	1/1:2,23:22:26.94:652,27,0	0/1:16,21:33:99:654,0,212	1/1:8,17:20:46.20:896,46,0	1/1:1,12:13:14.98:289,15,0	0/0:37,0:35:99:0,105,3031	0/0:15,0:12:30.08:0,30,864	0/0:32,0:32:96.27:0,96,2926	1/1:3,10:12:11.77:318,12,0	1/1:2,18:20:27.09:680,27,0	1/1:3,12:14:8.90:232,9,0	0/0:33,0:32:90.20:0,90,2709	1/1:3,18:21:18.95:444,19,0	1/1:3,12:15:14.64:321,15,0	1/1:3,14:15:35.89:704,36,0	1/1:10,1:9:24.07:440,24,0	1/1:43,2:36:39.45:689,39,0	1/1:8,8:15:26.24:449,26,0	1/1:1,18:19:6.01:138,6,0	1/1:1,30:31:11.97:346,12,0	1/1:2,20:22:24.86:602,25,0	0/1:21,0:18:34.73:35,0,211	1/1:2,12:13:8.92:169,9,0	1/1:7,0:5:2.98:19,3,0
chr10	102653298	.	GTGGTGA	G	3808.37	PASS	AB=0.992;AC=34;AF=0.607;AN=56;BaseQRankSum=6.335;DP=585;FS=4.261;HRun=0;HaplotypeScore=145.2295;InbreedingCoeff=0.6189;MQ=47.37;MQ0=51;MQRankSum=-4.244;QD=9.50;ReadPosRankSum=-3.930;VQSLOD=1.4648;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:17:21.94:172,22,0	0/0:17,0:16:38.96:0,39,912	0/0:21,0:12:11.56:0,12,231	0/0:21,0:14:24.99:0,25,420	0/0:24,0:23:57.02:0,57,1419	0/1:20,0:16:29.38:198,0,29	0/1:36,0:32:99:172,0,151	0/1:30,1:24:13.48:433,0,13	1/1:14,0:14:25.67:272,26,0	0/0:29,0:24:60.15:0,60,1458	0/0:18,0:15:39.08:0,39,839	0/0:24,0:24:60.13:0,60,1648	1/1:11,0:10:15.35:202,15,0	1/1:22,0:22:27.14:294,27,0	1/1:13,0:12:14.14:136,14,0	0/0:25,0:24:63.15:0,63,1625	1/1:21,0:20:30.01:263,30,0	1/1:12,0:12:28.65:316,29,0	1/1:18,3:16:27.13:444,27,0	1/1:1,7:8:11.62:103,12,0	1/1:19,27:36:4.49:16,4,0	1/1:27,0:27:2.92:17,3,0	1/1:14,0:13:9.27:87,9,0	1/1:31,0:31:30.29:372,30,0	1/1:20,0:18:23.82:163,24,0	0/1:22,0:15:36.92:37,0,403	1/1:8,3:9:11.27:110,11,0	0/0:4,0:2:6:0,6,84
chr10	102653301	.	GTGA	G	4590.10	PASS	AB=0.911;AC=36;AF=0.643;AN=56;BaseQRankSum=5.030;DP=561;FS=3.314;HRun=0;HaplotypeScore=117.9952;InbreedingCoeff=0.6363;MQ=49.71;MQ0=40;MQRankSum=-5.266;QD=11.92;ReadPosRankSum=-4.015;VQSLOD=3.9177;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,3:15:24.98:221,25,0	0/0:15,0:14:38.96:0,39,597	0/0:23,0:13:14.40:0,14,219	0/0:24,0:17:30.90:0,31,397	0/0:24,0:23:56.04:0,56,931	0/1:13,5:14:7.59:204,0,8	0/1:31,6:33:50.69:358,0,51	1/1:30,0:24:11.21:397,11,0	1/1:12,2:14:26.24:259,26,0	0/0:28,0:23:60.12:0,60,941	0/0:16,0:15:44.27:0,44,594	0/0:23,0:23:63.11:0,63,1072	1/1:6,3:8:20.97:275,21,0	1/1:18,4:22:43.08:441,43,0	1/1:10,2:11:17.71:166,18,0	0/0:23,0:22:62.80:0,63,1051	1/1:19,2:20:35.16:430,35,0	1/1:8,4:12:29.93:378,30,0	1/1:18,0:15:27.06:236,27,0	1/1:8,0:8:11.76:85,12,0	1/1:37,0:31:1.25:3,1,0	1/1:4,22:26:2.82:17,3,0	1/1:13,2:14:12.78:141,13,0	1/1:23,7:30:39.26:448,39,0	1/1:15,4:17:26.56:309,27,0	0/1:23,0:16:99:104,0,121	1/1:11,0:9:11.26:76,11,0	0/1:5,0:4:11.36:42,0,11
chr10	102653456	.	A	AAC	568.89	PASS	AB=0.934;AC=19;AF=0.413;AN=46;BaseQRankSum=1.681;DP=430;FS=14.199;HRun=0;HaplotypeScore=92.7454;InbreedingCoeff=0.3029;MQ=65.82;MQ0=7;MQRankSum=-1.900;QD=2.84;ReadPosRankSum=-0.203;VQSLOD=0.8242;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,10:35:43.50:168,0,44	0/0:8,0:8:9.01:0,9,88	./.	./.	0/0:16,0:18:8.67:0,9,78	0/0:9,0:8:5.74:0,6,37	0/0:18,0:17:14.77:0,15,107	1/1:22,0:21:6.01:65,6,0	0/1:11,0:11:19:19,0,19	0/0:12,0:12:5.78:0,6,35	0/0:10,0:10:5.81:0,6,45	0/0:12,0:12:2.99:0,3,24	./.	0/0:13,0:13:5.83:0,6,38	0/0:13,0:13:2.90:0,3,31	0/0:11,0:12:14.46:0,14,142	0/1:22,0:22:1:1,0,81	0/1:13,0:13:10.30:10,0,19	1/1:16,0:15:7.21:56,7,0	1/1:14,0:13:3.01:43,3,0	./.	1/1:9,1:10:3.01:44,3,0	./.	0/0:30,0:30:16.86:0,17,155	0/1:14,2:16:70.20:70,0,80	1/1:12,4:16:11.18:97,11,0	1/1:10,0:10:3:29,3,0	1/1:8,0:13:11.99:117,12,0
chr10	102653502	.	CAT	C	4201.07	PASS	AB=0.974;AC=27;AF=0.482;AN=56;BaseQRankSum=-0.709;DP=545;FS=4.785;HRun=0;HaplotypeScore=77.7435;InbreedingCoeff=0.3784;MQ=66.54;MQ0=20;MQRankSum=-1.322;QD=12.04;ReadPosRankSum=0.066;VQSLOD=3.0147;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:37:6.55:381,0,7	0/0:8,0:8:24.03:0,24,321	0/0:34,0:19:54.53:0,55,536	0/0:31,0:21:35.78:0,36,542	0/0:21,0:21:45.82:0,46,508	0/1:17,0:14:2.88:179,0,3	0/1:21,0:21:30.02:320,0,30	1/1:27,0:27:15.11:422,15,0	0/1:15,0:14:15.35:141,0,15	0/0:23,0:23:56.19:0,56,607	0/0:17,0:17:38.87:0,39,368	0/0:17,0:17:49.95:0,50,430	1/1:9,0:9:26.32:171,26,0	0/1:15,1:16:5.98:201,0,6	1/1:15,0:15:7.40:225,7,0	0/0:13,0:13:35.52:0,36,419	0/1:24,0:24:41.97:259,0,42	1/1:18,0:18:49.76:359,50,0	0/1:11,3:14:24.55:158,0,25	1/1:19,0:18:8.23:168,8,0	1/1:23,0:19:35.04:225,35,0	1/1:21,0:19:16.60:154,17,0	1/1:16,0:16:41.51:288,42,0	0/1:21,0:21:99:163,0,104	0/1:21,0:21:38.40:210,0,38	0/0:22,0:22:62.48:0,62,576	1/1:14,0:14:9.36:178,9,0	0/0:10,0:10:21.84:0,22,201
chr10	102654218	.	G	GTATGTACACATA	39579.11	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-6.625;DP=660;FS=1.485;HRun=0;HaplotypeScore=213.9919;InbreedingCoeff=0.8955;MQ=65.91;MQ0=1;MQRankSum=-17.036;QD=89.34;ReadPosRankSum=-0.483;VQSLOD=4.7967;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,8:23:29.88:1675,30,0	0/0:11,0:11:21.07:0,21,778	0/1:18,0:18:19.70:20,0,1119	0/0:20,0:20:11.92:0,12,1382	0/0:39,0:39:99:0,111,3890	1/1:16,14:33:63.22:3454,63,0	1/1:13,5:19:30.10:1471,30,0	1/1:40,12:57:99:7169,156,0	1/1:10,16:27:60.21:3303,60,0	0/0:32,0:32:87.30:0,87,2906	0/0:29,0:29:84.29:0,84,2865	0/0:23,0:23:63.22:0,63,2284	1/1:13,9:25:42.14:2281,42,0	1/1:5,14:21:45.15:2521,45,0	1/1:10,20:32:57.20:3268,57,0	0/0:23,0:23:66.23:0,66,2359	1/1:13,3:18:27.09:1245,27,0	1/1:5,4:9:18.06:1009,18,0	1/1:7,5:17:51.16:2226,51,0	1/1:12,16:30:45.15:2422,45,0	1/1:9,7:17:15.05:841,15,0	1/1:9,9:22:30.10:1530,30,0	1/1:6,8:18:21.03:1111,21,0	1/1:5,6:13:6.02:364,6,0	1/1:8,10:18:27.09:1568,27,0	0/0:25,0:25:69.24:0,69,2484	1/1:11,10:25:39.13:2101,39,0	0/0:15,0:15:42.11:0,42,1379
chr10	102654511	.	CCCAGCCACAT	C	22342.21	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=12.733;DP=543;FS=3.069;HRun=0;HaplotypeScore=189.3938;InbreedingCoeff=0.9949;MQ=81.43;MQ0=0;MQRankSum=-16.744;QD=65.33;ReadPosRankSum=7.751;VQSLOD=4.2343;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,29:38:63.22:1817,63,0	0/0:12,0:12:30.10:0,30,1511	0/0:23,0:23:66.23:0,66,2294	0/0:21,0:21:42.37:0,42,1847	0/0:16,0:16:45.15:0,45,2267	1/1:1,21:22:54.19:1748,54,0	1/1:9,15:24:48.16:1553,48,0	1/1:12,12:24:30.09:803,30,0	1/1:1,15:16:45.15:1447,45,0	0/0:26,0:26:78.27:0,78,3751	0/0:18,0:18:51.18:0,51,2425	0/0:28,0:28:81.25:0,81,3888	1/1:2,16:18:45.15:1456,45,0	1/1:3,17:20:51.17:1650,51,0	1/1:0,23:23:60.21:1941,60,0	0/0:18,0:18:45.15:0,45,2250	1/1:8,16:24:30.10:965,30,0	1/1:2,11:13:30.10:971,30,0	1/1:2,15:17:39.13:1163,39,0	1/1:2,23:25:60.21:1843,60,0	1/1:6,7:13:17.99:541,18,0	1/1:2,12:14:33.11:1068,33,0	1/1:1,12:13:21.07:592,21,0	1/1:1,9:10:21.07:591,21,0	1/1:2,5:7:15.05:444,15,0	0/0:21,0:21:63.22:0,63,3173	1/1:1,20:21:54.19:1748,54,0	0/0:18,0:18:45.15:0,45,2267
chr10	102657383	.	GTGT	G	5635.20	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=16.985;DP=474;FS=3.585;HRun=0;HaplotypeScore=125.9232;InbreedingCoeff=0.9959;MQ=77.57;MQ0=0;MQRankSum=-17.101;QD=30.30;ReadPosRankSum=2.968;VQSLOD=5.1384;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:60.43:634,60,0	0/0:11,0:11:30.05:0,30,629	0/0:19,0:19:47.62:0,48,966	0/0:12,0:12:34.93:0,35,735	0/0:21,0:21:63.22:0,63,1530	1/1:1,13:14:42.11:477,42,0	1/1:1,18:19:53.93:539,54,0	0/0:33,0:33:99:0,99,2245	1/1:1,14:15:45.02:497,45,0	0/0:19,0:19:54.18:0,54,1250	0/0:14,0:14:42.14:0,42,1001	0/0:23,0:23:69.24:0,69,1700	1/1:2,11:13:38.92:409,39,0	1/1:1,14:15:44.96:478,45,0	1/1:1,18:19:57.15:639,57,0	0/0:23,0:23:69.22:0,69,1652	1/1:0,18:18:48.13:540,48,0	1/1:1,8:9:26.75:314,27,0	0/0:18,0:18:54.18:0,54,1228	0/0:18,0:18:51.17:0,51,1195	0/0:22,0:22:66.23:0,66,1601	1/1:1,7:8:18:190,18,0	1/1:0,6:6:14.63:146,15,0	1/1:1,18:19:45.59:495,46,0	1/1:0,10:10:24.07:279,24,0	0/0:17,0:17:51.17:0,51,1184	0/0:21,0:21:63.22:0,63,1513	0/0:17,0:17:51.18:0,51,1257
chr10	102657387	.	G	GC	3517.47	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=17.074;DP=462;FS=0.747;HRun=0;HaplotypeScore=116.6184;InbreedingCoeff=0.9957;MQ=73.62;MQ0=0;MQRankSum=-16.686;QD=19.12;ReadPosRankSum=3.247;VQSLOD=5.7844;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:49.46:352,49,0	0/0:8,0:8:24.08:0,24,334	0/0:14,0:14:35.30:0,35,449	0/0:12,0:12:31.60:0,32,385	0/0:21,0:21:63.21:0,63,875	1/1:1,13:14:38.81:287,39,0	1/1:1,18:19:41.17:305,41,0	0/0:29,0:29:84.26:0,84,1143	1/1:0,14:14:41.76:304,42,0	0/0:19,0:19:51.17:0,51,712	0/0:14,0:14:42.14:0,42,587	0/0:24,0:24:69.23:0,69,965	1/1:2,11:13:35.73:256,36,0	1/1:2,14:16:47.63:348,48,0	1/1:1,18:19:53.66:387,54,0	0/0:22,0:22:66.22:0,66,923	1/1:0,18:18:47.58:336,48,0	1/1:1,8:9:26.82:217,27,0	0/0:15,0:15:45.14:0,45,614	0/0:18,0:18:48.14:0,48,652	0/0:25,0:25:75.19:0,75,992	1/1:1,7:8:17.90:142,18,0	1/1:0,6:6:14.82:102,15,0	1/1:1,18:19:44.24:305,44,0	1/1:0,10:10:23.88:177,24,0	0/0:18,0:18:48.16:0,48,670	0/0:22,0:22:66.20:0,66,897	0/0:17,0:17:51.17:0,51,713
chr10	102657555	.	CT	C	11134.58	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=20.816;DP=763;FS=20.390;HRun=4;HaplotypeScore=116.7626;InbreedingCoeff=0.9957;MQ=84.28;MQ0=0;MQRankSum=-6.765;QD=30.93;ReadPosRankSum=5.430;VQSLOD=3.0099;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:39:96.29:1151,96,0	0/0:21,0:21:60.20:0,60,840	0/0:30,0:30:84.25:0,84,1157	0/0:30,0:30:84.20:0,84,1076	0/0:33,0:33:93.30:0,93,1284	1/1:0,24:24:66.20:788,66,0	1/1:1,31:32:84.26:1006,84,0	0/0:35,0:35:96.30:0,96,1287	1/1:1,19:20:48.15:571,48,0	0/0:24,0:24:72.24:0,72,1008	0/0:23,0:23:63.21:0,63,875	0/0:29,0:29:84.24:0,84,1122	1/1:1,26:27:65.76:790,66,0	1/1:0,20:20:54.17:646,54,0	1/1:1,26:27:72.22:862,72,0	0/0:27,0:27:78.24:0,78,1058	1/1:1,30:31:75.23:899,75,0	1/1:1,25:26:72.22:862,72,0	0/0:25,0:25:72.20:0,72,934	0/0:33,0:33:93.30:0,93,1285	0/0:33,0:33:87.26:0,87,1183	1/1:1,36:37:99:1185,99,0	1/1:0,27:27:69.08:827,69,0	1/1:0,35:35:93.29:1115,93,0	1/1:0,15:15:36.11:432,36,0	0/0:19,0:19:54.18:0,54,756	0/0:35,0:35:99:0,105,1414	0/0:5,0:5:12.02:0,12,135
chr10	102657973	.	CTCTCTG	C	711.46	PASS	AB=1.000;AC=16;AF=0.296;AN=54;BaseQRankSum=6.915;DP=707;FS=5.434;HRun=0;HaplotypeScore=228.6995;InbreedingCoeff=0.5966;MQ=70.26;MQ0=10;MQRankSum=-3.574;QD=3.25;ReadPosRankSum=-0.215;VQSLOD=2.3176;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:11.78:0,12,76	0/0:10,0:10:24.08:0,24,612	0/0:41,0:26:51.15:0,51,886	0/0:46,0:29:24.50:0,24,308	0/0:24,0:24:60.19:0,60,1455	0/1:29,0:29:0.07:0,0,0	0/1:29,0:29:5.02:5,0,34	0/0:44,0:43:59.48:0,59,1369	1/1:27,0:26:6.63:61,7,0	0/0:28,0:28:72.24:0,72,2124	0/0:10,0:10:24.08:0,24,664	0/0:21,0:21:43.39:0,43,1260	0/1:27,0:27:7.42:45,0,7	1/1:27,0:27:7.48:45,7,0	0/0:34,0:33:5.84:0,6,40	0/0:35,0:35:78.27:0,78,2332	1/1:19,0:18:3.07:11,3,0	0/1:11,0:11:0.86:1,0,15	0/0:23,0:21:36.11:0,36,838	0/0:24,0:24:60.21:0,60,1675	0/0:45,0:45:81.27:0,81,2207	0/0:17,0:17:5.99:0,6,48	0/0:12,0:12:0.47:0,0,1	./.	1/1:24,0:24:0.47:1,0,0	1/1:10,10:20:30.09:550,30,0	0/0:21,0:21:39.13:0,39,1132	1/1:6,0:6:9.03:143,9,0
chr10	102657989	.	C	CTG	1421.27	PASS	AB=1.000;AC=23;AF=0.442;AN=52;BaseQRankSum=7.888;DP=642;FS=0.556;HRun=0;HaplotypeScore=183.4003;InbreedingCoeff=0.8554;MQ=55.14;MQ0=17;MQRankSum=0.239;QD=5.78;ReadPosRankSum=-2.532;VQSLOD=2.7860;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,11:28:14.90:218,15,0	0/0:10,0:10:30.05:0,30,387	0/0:42,0:19:47.86:0,48,553	0/0:41,0:16:16.94:0,17,190	0/0:23,0:23:63.13:0,63,806	1/1:21,4:25:11.62:97,12,0	1/1:14,8:22:6.02:80,6,0	0/0:37,0:35:91.73:0,92,1137	1/1:23,0:22:20.37:192,20,0	0/0:27,0:27:78.25:0,78,1100	0/0:8,0:8:24.07:0,24,325	0/0:23,0:23:57.14:0,57,759	1/1:28,0:28:13.19:289,13,0	1/1:27,0:27:23.78:211,24,0	1/1:33,1:33:15.37:176,15,0	0/0:30,0:29:84.27:0,84,1183	1/1:2,12:13:5.88:57,6,0	1/1:5,1:6:13.90:151,14,0	0/0:22,0:19:51.11:0,51,668	0/0:25,0:24:60.06:0,60,821	0/0:42,0:42:75.25:0,75,1073	./.	1/1:11,1:12:12.45:98,12,0	./.	1/1:14,4:18:3.01:51,3,0	0/0:16,0:16:13.42:0,13,267	0/0:23,0:23:41.95:0,42,556	0/1:9,0:8:4.73:5,0,159
chr10	102657999	.	GTCTC	G	1148.01	PASS	AB=0.874;AC=21;AF=0.389;AN=54;BaseQRankSum=8.912;DP=654;FS=5.825;HRun=0;HaplotypeScore=210.8892;InbreedingCoeff=0.7258;MQ=45.80;MQ0=20;MQRankSum=-2.463;QD=4.28;ReadPosRankSum=-3.729;VQSLOD=1.5189;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,2:33:12.02:125,12,0	0/0:8,0:8:24.07:0,24,611	0/0:37,0:12:36.12:0,36,675	0/0:35,0:6:4.91:0,5,179	0/0:21,0:20:51.15:0,51,1213	1/1:12,12:24:8.96:70,9,0	1/1:8,11:19:6.01:63,6,0	0/0:35,0:33:94.17:0,94,2175	1/1:10,14:23:23.64:264,24,0	0/0:29,0:29:84.26:0,84,2158	0/0:7,0:7:21.07:0,21,545	0/0:23,0:23:63.22:0,63,1655	1/1:11,14:25:21.01:243,21,0	1/1:15,16:31:22.93:235,23,0	1/1:21,20:40:11.25:103,11,0	0/0:30,0:29:84.26:0,84,2129	0/1:15,0:14:14.46:40,0,14	0/1:9,0:9:23.99:90,0,24	0/0:23,0:19:57.16:0,57,1361	0/0:26,0:25:54.17:0,54,1353	0/0:43,0:43:75.17:0,75,1788	0/1:7,11:17:0:0,0,0	1/1:7,5:12:8.52:72,9,0	./.	1/1:3,12:15:3.01:37,3,0	0/0:18,0:18:47.63:0,48,706	0/0:24,0:24:48.78:0,49,1090	0/0:10,0:9:21:0,21,341
chr10	102658003	.	C	CTG	403.39	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=8.357;DP=649;FS=0.712;HRun=0;HaplotypeScore=206.9030;InbreedingCoeff=0.7245;MQ=44.01;MQ0=19;MQRankSum=-3.406;QD=1.54;ReadPosRankSum=-4.404;VQSLOD=1.6923;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,7:34:8.47:68,8,0	0/0:10,0:10:27.06:0,27,350	0/0:38,0:12:30.04:0,30,354	0/0:36,0:7:9.74:0,10,103	0/0:20,0:19:42.12:0,42,580	1/1:23,0:24:1.78:19,2,0	1/1:17,0:17:5.68:23,6,0	0/0:35,0:33:90.57:0,91,1176	1/1:22,0:21:8.05:42,8,0	0/0:27,0:27:81.24:0,81,1125	0/0:9,0:9:18.06:0,18,258	0/0:25,0:25:66.07:0,66,897	1/1:24,0:25:21.47:146,21,0	1/1:29,0:30:0.08:44,0,0	1/1:41,0:41:5.53:50,6,0	0/0:28,0:27:75.24:0,75,1054	1/1:9,5:13:1.24:30,1,0	1/1:9,0:10:9.38:107,9,0	0/0:22,0:19:54.18:0,54,762	0/0:27,0:26:51.03:0,51,693	0/0:42,0:42:60.17:0,60,823	0/1:18,0:17:0:0,0,0	0/1:10,0:10:0:0,0,0	0/0:14,0:15:0:0,0,0	1/1:14,0:14:3.01:48,3,0	0/0:17,0:17:45.11:0,45,608	0/0:27,0:27:51:0,51,634	0/0:9,0:8:18.06:0,18,257
chr10	102658010	.	TGC	T	834.25	PASS	AB=0.759;AC=18;AF=0.321;AN=56;BaseQRankSum=9.160;DP=606;FS=14.011;HRun=0;HaplotypeScore=185.2843;InbreedingCoeff=0.7551;MQ=43.26;MQ0=24;MQRankSum=-7.794;QD=4.49;ReadPosRankSum=0.158;VQSLOD=1.9324;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,2:26:0.78:0,1,2	0/0:11,0:11:30.10:0,30,585	0/0:34,0:6:18.06:0,18,280	0/0:36,0:6:9.50:0,10,161	0/0:19,0:17:42.14:0,42,794	1/1:16,2:18:2.70:49,3,0	1/1:13,0:13:3.01:31,3,0	0/0:35,0:32:93.31:0,93,1761	1/1:16,2:17:13.85:151,14,0	0/0:29,0:29:87.21:0,87,1682	0/0:10,0:10:24.08:0,24,469	0/0:25,0:25:69.24:0,69,1372	1/1:17,5:22:23.30:270,23,0	1/1:20,8:28:17.89:225,18,0	0/1:30,9:38:0.01:0,0,0	0/0:29,0:28:78.24:0,78,1488	1/1:12,1:12:8.20:68,8,0	1/1:10,0:10:10.83:189,11,0	0/0:24,0:22:65.85:0,66,1185	0/0:27,0:26:45.15:0,45,821	0/0:38,0:38:54.19:0,54,1061	0/0:11,5:15:0:0,0,0	0/0:6,1:7:0:0,0,0	0/1:7,5:12:0:0,0,0	1/1:13,0:13:2.98:22,3,0	0/0:17,0:17:48.15:0,48,851	0/0:28,0:28:51.04:0,51,887	0/0:7,0:6:18.06:0,18,361
chr10	102658011	.	GCCTC	G	1249.33	PASS	AB=0.633;AC=17;AF=0.315;AN=54;BaseQRankSum=9.145;DP=601;FS=20.392;HRun=0;HaplotypeScore=193.1850;InbreedingCoeff=0.7727;MQ=43.19;MQ0=24;MQRankSum=-8.345;QD=6.68;ReadPosRankSum=0.793;VQSLOD=1.5844;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,11:26:0.59:0,1,2	0/0:11,0:11:30.10:0,30,812	0/0:34,0:6:15.03:0,15,306	0/0:34,0:6:9.50:0,10,187	0/0:20,0:18:45.15:0,45,1140	1/1:3,15:18:2.88:30,3,0	1/1:0,11:13:3.01:37,3,0	0/0:34,0:31:90.31:0,90,2254	1/1:2,16:17:14.49:207,14,0	0/0:30,0:30:90.30:0,90,2353	0/0:10,0:10:24.08:0,24,616	0/0:25,0:25:69.21:0,69,1866	1/1:6,16:22:24.17:296,24,0	1/1:9,19:28:18.01:241,18,0	0/1:12,26:37:0.21:0,0,1	0/0:27,0:26:72.25:0,72,1943	1/1:8,4:12:8.52:147,9,0	1/1:2,7:10:27.09:458,27,0	0/0:25,0:23:68.97:0,69,1539	0/0:27,0:26:45.15:0,45,1031	0/0:38,0:38:54.19:0,54,1438	0/1:5,10:14:0:0,0,0	0/0:1,6:7:0:0,0,0	0/1:7,4:12:0:0,0,0	./.	0/0:16,0:16:47.73:0,48,972	0/0:28,0:28:51.23:0,51,1149	0/0:7,0:6:18.06:0,18,500
chr10	102658019	.	CTCTCTG	C	943.53	PASS	AB=0.953;AC=23;AF=0.442;AN=52;BaseQRankSum=5.594;DP=624;FS=2.553;HRun=0;HaplotypeScore=224.1494;InbreedingCoeff=0.5045;MQ=41.54;MQ0=23;MQRankSum=-7.232;QD=2.56;ReadPosRankSum=-0.993;VQSLOD=2.6683;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:0.47:0,0,1	0/0:12,0:12:27.01:0,27,523	./.	./.	0/0:20,0:18:21.07:0,21,626	1/1:20,0:20:2.51:18,3,0	0/1:19,0:19:0.06:0,0,0	1/1:30,0:27:17.72:114,18,0	1/1:20,0:19:9.29:88,9,0	0/0:29,0:29:36.11:0,36,874	0/0:9,0:9:9:0,9,190	0/0:27,0:27:57.11:0,57,1374	1/1:24,0:24:8.60:123,9,0	1/1:31,0:31:8.99:86,9,0	0/1:40,0:39:0.47:1,0,0	0/0:24,0:23:27.07:0,27,655	0/1:16,0:14:1.51:20,0,2	0/1:11,0:11:7.62:49,0,8	1/1:20,4:22:17.50:259,18,0	1/1:29,1:29:2.46:24,2,0	0/1:21,20:41:0:0,0,0	0/0:18,0:16:0:0,0,0	0/0:10,0:9:0:0,0,1	0/0:14,0:14:0:0,0,0	0/1:16,0:16:0:0,0,0	0/1:18,0:18:23.76:24,0,315	1/1:14,14:28:13.70:287,14,0	0/0:9,0:8:24.02:0,24,407
chr10	102658029	.	C	CTG	961.16	PASS	AB=0.957;AC=17;AF=0.304;AN=56;BaseQRankSum=8.434;DP=610;FS=11.053;HRun=0;HaplotypeScore=205.9307;InbreedingCoeff=0.4727;MQ=41.90;MQ0=20;MQRankSum=-6.876;QD=3.63;ReadPosRankSum=1.764;VQSLOD=1.2818;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,6:24:0.13:0,0,0	0/0:14,0:14:36.10:0,36,496	0/0:17,0:2:3:0,3,25	0/0:22,0:3:9.03:0,9,129	0/0:26,0:24:62.86:0,63,732	1/1:19,0:19:0.63:4,1,0	0/0:14,1:17:0.14:0,0,1	0/0:29,0:27:66.04:0,66,792	0/1:20,1:20:17.82:93,0,18	0/0:29,0:28:78.20:0,78,1027	0/0:10,0:9:18.06:0,18,258	0/0:26,0:26:66.19:0,66,924	1/1:22,2:25:3.85:280,4,0	0/1:32,0:33:19.07:130,0,19	1/1:38,2:39:2.41:15,2,0	0/0:27,0:27:75.20:0,75,1026	1/1:13,4:15:11.97:201,12,0	1/1:7,3:11:13.49:374,13,0	0/0:19,0:18:48.28:0,48,583	0/1:26,0:26:5.22:5,0,160	0/0:36,0:36:23.98:0,24,262	0/1:20,0:18:0:0,0,0	0/1:11,1:11:0.01:0,0,0	0/0:11,5:16:0:0,0,0	0/1:13,0:14:0:0,0,0	0/0:22,0:22:60.07:0,60,756	0/0:26,0:26:42.66:0,43,478	0/0:9,0:8:24.08:0,24,341
chr10	102658031	.	GTCTC	G	400.01	PASS	AB=0.835;AC=11;AF=0.196;AN=56;BaseQRankSum=8.686;DP=627;FS=3.382;HRun=0;HaplotypeScore=223.7537;InbreedingCoeff=0.2385;MQ=41.80;MQ0=20;MQRankSum=-7.229;QD=2.08;ReadPosRankSum=4.995;VQSLOD=2.5280;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,8:26:4.33:0,4,13	0/0:15,0:15:42.13:0,42,924	0/0:16,0:2:3:0,3,25	0/0:21,0:3:9.03:0,9,129	0/0:26,0:24:63.20:0,63,1190	0/1:14,7:21:5.19:5,0,9	0/0:13,4:17:3.56:0,4,12	0/0:30,0:28:81.06:0,81,926	0/1:17,5:21:14.22:45,0,14	0/0:30,0:29:84.27:0,84,1720	0/0:12,0:11:21.06:0,21,385	0/0:26,0:26:69.24:0,69,1677	1/1:20,5:25:5.49:79,5,0	0/1:22,11:33:18.78:52,0,19	0/0:26,14:39:4.42:0,4,17	0/0:27,0:27:75.25:0,75,1532	0/1:13,5:16:4.90:81,0,5	1/1:6,5:11:12.11:233,12,0	0/1:21,0:19:3.57:4,0,480	0/0:27,0:27:14.65:0,15,174	0/0:35,0:35:23.99:0,24,281	0/0:16,7:21:6.11:0,6,19	0/0:6,6:11:0.47:0,0,2	0/0:15,3:18:1.94:0,2,6	0/1:10,5:15:0.13:0,0,0	0/0:22,0:22:66.05:0,66,1121	0/1:26,0:26:35.69:36,0,327	0/0:9,0:8:24.08:0,24,611
chr10	102658035	.	C	CTG	290.13	PASS	AB=0.963;AC=14;AF=0.259;AN=54;BaseQRankSum=8.186;DP=639;FS=9.737;HRun=0;HaplotypeScore=225.6512;InbreedingCoeff=0.4350;MQ=41.93;MQ0=19;MQRankSum=-6.801;QD=1.06;ReadPosRankSum=2.796;VQSLOD=1.1738;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,2:25:0.13:0,0,0	0/0:15,0:15:42.11:0,42,559	./.	0/0:20,0:3:9.03:0,9,128	0/0:27,0:25:66.17:0,66,883	0/0:21,0:21:2.92:0,3,18	0/1:19,0:19:0.33:0,0,1	0/0:30,0:28:70.40:0,70,906	0/1:23,1:23:15.54:16,0,27	0/0:30,0:29:84.26:0,84,1154	0/0:12,0:11:21.04:0,21,263	0/0:26,0:26:69.21:0,69,966	0/1:25,0:25:1.11:75,0,1	0/1:34,0:34:5.70:43,0,6	0/1:39,2:40:4.99:18,0,5	0/0:28,0:28:78.22:0,78,1077	1/1:16,2:16:0.89:72,1,0	1/1:10,1:11:26.33:191,26,0	0/0:21,0:19:50.93:0,51,568	0/0:25,0:25:15.02:0,15,177	0/0:36,0:36:18.05:0,18,240	0/1:26,0:25:0:0,0,0	0/1:14,0:13:0.01:1,0,0	0/1:12,5:18:0.03:0,0,0	0/1:16,0:16:0:0,0,0	0/0:23,0:23:63.15:0,63,836	0/0:27,0:27:39.60:0,40,380	0/0:9,0:8:24.08:0,24,343
chr10	102658039	.	C	CTG	191.03	PASS	AB=0.967;AC=17;AF=0.304;AN=56;BaseQRankSum=8.694;DP=655;FS=6.441;HRun=0;HaplotypeScore=238.0548;InbreedingCoeff=0.5919;MQ=42.20;MQ0=18;MQRankSum=-7.813;QD=0.72;ReadPosRankSum=4.415;VQSLOD=1.8005;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:29:0.13:0,0,1	0/0:16,0:16:42.13:0,42,621	0/0:13,0:2:3.01:0,3,45	0/0:21,0:3:9.03:0,9,135	0/0:28,0:26:66.21:0,66,984	1/1:23,0:23:1.75:16,2,0	0/1:19,1:20:0.33:0,0,1	0/0:29,0:27:57.24:0,57,1060	0/1:23,1:23:14.18:39,0,14	0/0:30,0:29:87.29:0,87,1312	0/0:12,0:11:21.05:0,21,299	0/0:26,0:26:72.08:0,72,1044	1/1:23,1:24:8.78:88,9,0	1/1:33,1:34:13.11:63,13,0	0/0:37,3:39:5.07:0,5,35	0/0:29,0:29:78.25:0,78,1169	1/1:18,0:16:9.32:58,9,0	1/1:11,0:11:2.51:68,3,0	0/0:22,0:20:54.04:0,54,676	0/0:28,0:28:21.03:0,21,268	0/0:35,0:36:20.73:0,21,317	0/1:27,1:27:0:0,0,0	0/1:18,0:17:0.01:1,0,0	0/1:17,1:18:0.03:0,0,0	0/1:15,1:16:0:0,0,0	0/0:23,0:23:66.20:0,66,964	0/0:27,0:27:43.03:0,43,464	0/0:9,0:8:24.08:0,24,367
chr10	102658043	.	GTC	G	554.93	PASS	AB=0.903;AC=9;AF=0.161;AN=56;BaseQRankSum=7.942;DP=633;FS=2.327;HRun=0;HaplotypeScore=217.1548;InbreedingCoeff=0.3430;MQ=44.05;MQ0=14;MQRankSum=-6.514;QD=3.53;ReadPosRankSum=4.826;VQSLOD=2.7200;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:32:2.59:0,3,21	0/0:15,0:15:38.91:0,39,711	0/0:11,0:2:5.89:0,6,69	0/0:20,0:4:3.32:0,3,86	0/0:28,0:27:69.22:0,69,1190	0/0:20,1:21:13.77:0,14,40	0/1:17,0:17:17.48:22,0,17	0/0:25,0:24:66.10:0,66,967	0/1:16,5:21:9.24:115,0,9	0/0:30,0:29:84.29:0,84,1488	0/0:15,0:14:30.04:0,30,436	0/0:26,0:26:69.15:0,69,1218	1/1:15,6:21:19.08:195,19,0	0/1:26,6:32:14.65:73,0,15	0/1:32,6:37:6.68:34,0,7	0/0:29,0:29:69.21:0,69,1167	1/1:17,0:15:10.98:144,11,0	0/1:11,0:11:0.73:118,0,1	0/0:21,0:19:22.90:0,23,518	0/0:30,0:30:35.79:0,36,454	0/0:38,0:38:21.04:0,21,296	0/0:25,1:25:11.98:0,12,36	0/0:17,0:16:12.17:0,12,37	0/0:18,1:19:4:0,4,12	0/0:12,1:13:7.76:0,8,24	0/0:23,0:23:69.21:0,69,1090	0/0:24,0:24:4.44:0,4,326	0/0:9,0:8:24.08:0,24,419
chr10	102658049	.	GTC	G	116.80	PASS	AB=0.926;AC=13;AF=0.232;AN=56;BaseQRankSum=7.879;DP=657;FS=2.325;HRun=0;HaplotypeScore=224.9416;InbreedingCoeff=0.0532;MQ=49.17;MQ0=15;MQRankSum=-2.774;QD=0.45;ReadPosRankSum=2.342;VQSLOD=2.6883;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:33:13.79:14,0,15	0/0:16,0:16:41.91:0,42,688	0/1:16,0:5:18.16:18,0,122	0/0:19,0:6:2.84:0,3,84	0/0:25,0:24:68.69:0,69,1156	0/1:23,1:24:2.88:3,0,25	0/1:16,1:17:12.56:26,0,13	0/0:26,0:25:47.95:0,48,698	0/1:17,5:22:17.46:24,0,17	0/0:36,0:34:95.49:0,95,1556	0/0:17,0:16:33.09:0,33,511	0/0:26,0:26:72.08:0,72,1228	0/1:15,5:20:7.63:8,0,13	0/0:25,6:31:0.17:0,0,6	0/1:33,6:38:3.04:28,0,3	0/0:24,0:24:69.21:0,69,1156	0/1:17,0:15:1.44:8,0,1	1/1:12,0:12:19.45:106,19,0	0/0:20,0:19:2.94:0,3,433	0/0:22,0:35:44.82:0,45,701	0/0:39,0:39:21.03:0,21,332	0/0:26,1:26:14.02:0,14,42	0/0:19,0:18:12.17:0,12,37	0/1:17,1:18:5.04:7,0,5	0/1:14,1:15:8.48:8,0,17	0/0:26,0:26:69.60:0,70,942	0/1:21,0:23:13.47:13,0,204	0/0:10,0:9:21.05:0,21,306
chr10	102658051	.	C	CTG	1231.45	PASS	AB=0.718;AC=22;AF=0.393;AN=56;BaseQRankSum=9.255;DP=664;FS=4.526;HRun=0;HaplotypeScore=225.6769;InbreedingCoeff=0.5249;MQ=50.79;MQ0=15;MQRankSum=-4.177;QD=3.87;ReadPosRankSum=-2.042;VQSLOD=2.2029;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,17:33:8.31:85,0,8	0/0:16,0:16:41.88:0,42,621	0/1:15,0:6:16.86:17,0,136	0/0:22,0:8:8.28:0,8,120	0/0:25,0:25:72.23:0,72,1067	0/1:8,15:23:12.44:14,0,12	1/1:5,13:18:8.13:115,8,0	0/0:28,0:27:68.87:0,69,805	0/1:12,10:22:15.49:148,0,15	0/0:36,0:34:95.49:0,95,1350	0/0:17,0:16:33.08:0,33,461	0/0:26,0:26:72.24:0,72,1096	0/1:14,8:22:9.87:173,0,10	1/1:19,13:32:11.44:106,11,0	1/1:16,22:38:14.45:158,14,0	0/0:24,0:24:69.21:0,69,1011	1/1:6,8:12:17.95:188,18,0	1/1:6,6:12:29.76:317,30,0	0/0:20,0:19:56.82:0,57,670	0/0:35,0:35:51.14:0,51,714	0/0:36,0:36:21.04:0,21,294	1/1:10,17:26:2.72:25,3,0	0/1:7,14:20:0.01:1,0,0	1/1:7,12:19:2.98:33,3,0	1/1:4,12:16:5.95:43,6,0	0/0:28,0:28:78.12:0,78,972	0/0:22,0:22:30.40:0,30,298	0/0:9,0:9:27.04:0,27,328
chr10	102658055	.	GTC	G	1016.01	PASS	AB=0.943;AC=17;AF=0.304;AN=56;BaseQRankSum=7.850;DP=672;FS=0.000;HRun=0;HaplotypeScore=213.6476;InbreedingCoeff=0.2066;MQ=54.16;MQ0=14;MQRankSum=-3.954;QD=3.42;ReadPosRankSum=2.445;VQSLOD=2.5435;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,14:35:39.08:78,0,39	0/0:16,0:16:26.87:0,27,434	0/0:17,0:8:0.99:0,1,195	0/0:23,0:10:13.52:0,14,232	0/0:25,1:26:38.84:0,39,1054	0/1:21,2:23:21.89:47,0,22	0/1:19,0:19:8.46:85,0,8	0/0:28,1:28:9.79:0,10,800	1/1:17,3:20:3.01:130,3,0	0/0:33,0:32:84.20:0,84,1273	0/0:20,0:19:39.09:0,39,584	0/0:23,2:25:20.75:0,21,760	1/1:18,5:23:27.16:292,27,0	1/1:21,6:27:3.67:89,4,0	0/1:34,5:38:25.93:88,0,26	0/0:24,0:24:57.19:0,57,915	0/1:16,0:14:10.34:142,0,10	1/1:10,2:12:16.86:172,17,0	0/1:23,0:22:9.83:10,0,570	0/0:35,0:35:14.65:0,15,699	0/0:35,0:35:21.07:0,21,326	0/0:24,2:25:17.01:0,17,66	0/0:24,0:23:12.17:0,12,37	0/1:19,1:20:2.15:26,0,2	0/1:16,0:16:13.89:17,0,14	0/0:29,0:29:69.14:0,69,948	0/1:21,0:21:10.83:11,0,171	0/0:11,0:10:20.55:0,21,306
chr10	102658057	.	C	CTG	1725.58	PASS	AB=0.734;AC=22;AF=0.393;AN=56;BaseQRankSum=7.114;DP=679;FS=0.550;HRun=0;HaplotypeScore=215.2997;InbreedingCoeff=0.6913;MQ=54.26;MQ0=13;MQRankSum=-5.052;QD=5.69;ReadPosRankSum=-1.649;VQSLOD=2.9003;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,13:36:0.60:119,0,1	0/0:16,0:16:38.83:0,39,511	0/0:18,0:8:14.19:0,14,193	0/1:23,0:11:20.32:20,0,179	0/0:26,0:26:75.12:0,75,1098	0/1:10,14:24:7.13:105,0,7	1/1:8,12:20:11.28:163,11,0	0/0:30,0:29:62.81:0,63,897	1/1:10,10:20:13.49:183,13,0	0/0:34,0:32:93.29:0,93,1348	0/0:20,0:19:45.07:0,45,604	0/0:25,0:25:66.08:0,66,885	1/1:14,8:22:18.91:349,19,0	1/1:11,16:27:11.60:145,12,0	1/1:20,19:38:2.38:156,2,0	0/0:25,0:25:69.18:0,69,967	1/1:10,6:14:11.69:178,12,0	1/1:7,5:12:18.21:313,18,0	0/0:24,0:23:39.74:0,40,697	0/0:35,0:35:54.03:0,54,766	0/0:35,0:35:21.07:0,21,320	0/0:9,16:24:2.04:0,2,7	0/1:5,20:24:0.01:1,0,0	1/1:10,10:20:5.97:71,6,0	1/1:4,12:16:6.02:116,6,0	0/0:29,0:29:81.10:0,81,988	0/0:23,0:23:26.76:0,27,289	0/0:11,0:10:30.02:0,30,349
chr10	102659143	.	GCACACACACA	G	4903.58	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=5.545;DP=596;FS=4.289;HRun=0;HaplotypeScore=170.1206;InbreedingCoeff=0.8414;MQ=58.21;MQ0=12;MQRankSum=-8.604;QD=17.83;ReadPosRankSum=0.875;VQSLOD=4.0834;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,10:30:12.04:353,12,0	0/0:13,0:14:27.07:0,27,962	0/0:42,0:20:3.01:0,3,61	0/0:40,0:17:3.01:0,3,63	0/0:16,0:16:30.10:0,30,1266	1/1:6,10:17:15.05:400,15,0	1/1:22,11:33:15.05:430,15,0	0/0:24,0:23:21.92:0,22,404	1/1:7,13:21:42.13:1168,42,0	0/0:21,0:21:39.11:0,39,1397	0/0:10,0:10:18.06:0,18,664	0/0:14,0:19:30.10:0,30,1147	1/1:10,16:27:29.88:784,30,0	1/1:3,9:12:12.04:358,12,0	1/1:9,6:16:12.04:338,12,0	0/0:27,0:29:48.16:0,48,2139	1/1:15,8:23:9.03:268,9,0	1/1:8,7:15:3.01:89,3,0	0/0:15,0:16:9.03:0,9,178	0/0:9,0:22:24.08:0,24,420	0/0:23,0:23:24.08:0,24,570	1/1:12,7:19:3.48:77,3,0	1/1:5,6:11:9.03:243,9,0	1/1:28,2:30:11.98:161,12,0	1/1:6,9:15:9.03:235,9,0	0/0:10,0:10:21.07:0,21,984	0/0:14,0:28:38.72:0,39,624	0/0:6,0:5:9.03:0,9,418
chr10	102662126	.	T	TA	2286.43	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=8.881;DP=507;FS=0.000;HRun=10;HaplotypeScore=64.1788;InbreedingCoeff=0.8891;MQ=78.25;MQ0=0;MQRankSum=-1.445;QD=19.21;ReadPosRankSum=-1.360;VQSLOD=3.8429;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:62.89:0,63,517	0/0:11,0:11:17.97:0,18,148	0/0:14,0:15:12.48:0,12,142	0/1:14,0:15:5.49:5,0,125	0/0:13,0:13:23.95:0,24,197	0/0:16,0:16:47.95:0,48,394	0/0:18,0:18:50.92:0,51,415	1/1:7,21:29:41.47:623,41,0	0/0:20,2:22:15.94:0,16,337	0/0:23,0:23:56.86:0,57,459	0/0:16,0:16:44.93:0,45,366	0/0:16,0:16:38.94:0,39,318	0/0:17,0:17:35.92:0,36,292	0/0:5,0:5:14.98:0,15,123	0/0:17,0:17:41.90:0,42,339	0/0:20,1:21:24.93:0,25,411	0/0:25,0:25:56.88:0,57,463	0/0:26,0:26:68.87:0,69,558	1/1:8,18:26:13.89:558,14,0	1/1:1,16:17:45.03:455,45,0	1/1:2,18:20:54.10:563,54,0	0/0:11,0:11:17.95:0,18,148	0/0:11,0:11:32.93:0,33,266	0/0:29,0:29:83.80:0,84,674	0/0:16,0:16:35.93:0,36,293	0/0:19,0:19:38.92:0,39,320	1/1:2,9:11:24.06:256,24,0	0/0:12,0:12:35.96:0,36,296
chr10	102662194	.	CTA	C	882.58	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.664;DP=424;FS=10.004;HRun=0;HaplotypeScore=76.1574;InbreedingCoeff=0.8603;MQ=76.25;MQ0=2;MQRankSum=-2.109;QD=11.17;ReadPosRankSum=-0.957;VQSLOD=2.3916;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:46.51:0,47,372	0/0:7,0:7:5.75:0,6,151	0/0:25,0:18:51.01:0,51,549	0/0:25,0:19:37.15:0,37,426	0/0:9,0:9:2.26:0,2,125	0/0:11,0:11:18:0,18,184	0/0:15,0:15:26.62:0,27,288	1/1:27,0:25:30.33:457,30,0	0/0:14,0:14:37.04:0,37,357	0/0:18,0:17:45:0,45,454	0/0:10,0:10:21.44:0,21,268	0/0:15,0:15:32.67:0,33,503	0/0:17,0:17:43.31:0,43,382	0/0:6,0:6:14.99:0,15,170	0/0:8,0:8:21:0,21,208	0/0:14,0:14:22.46:0,22,289	0/0:17,0:17:41.87:0,42,367	0/0:24,0:24:59.86:0,60,610	1/1:15,0:15:28.90:235,29,0	1/1:10,2:12:8.08:103,8,0	1/1:16,4:20:26.92:215,27,0	0/0:19,0:20:38.91:0,39,381	0/0:6,0:6:14.94:0,15,131	0/0:31,0:31:75.44:0,75,734	0/0:9,0:9:23.49:0,23,271	0/0:15,0:15:39.01:0,39,405	1/1:5,0:5:5.86:35,6,0	0/0:4,0:4:7.25:0,7,75
chr10	102662197	.	T	TACAC	3630.33	PASS	AB=0.799;AC=34;AF=0.680;AN=50;BaseQRankSum=-0.785;DP=505;FS=2.976;HRun=0;HaplotypeScore=120.9270;InbreedingCoeff=0.4345;MQ=66.38;MQ0=3;MQRankSum=-1.334;QD=9.63;ReadPosRankSum=-1.604;VQSLOD=2.2464;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,7:35:6.02:141,6,0	0/0:8,0:8:9.02:0,9,121	./.	./.	0/0:6,0:8:9.01:0,9,95	0/1:13,0:19:19.24:74,0,19	0/1:13,3:18:19.19:75,0,19	1/1:41,0:40:42.34:433,42,0	0/1:13,2:15:1.19:220,0,1	0/0:19,0:19:2.48:0,2,68	0/0:10,0:11:12.01:0,12,125	0/0:14,0:15:24.05:0,24,312	1/1:16,0:17:15.19:181,15,0	./.	1/1:7,3:11:3.01:71,3,0	0/0:12,0:14:9.49:0,9,103	1/1:14,6:23:12.04:283,12,0	0/1:18,7:28:22.37:367,0,22	1/1:23,0:23:15.52:283,16,0	1/1:18,0:18:5.89:91,6,0	1/1:24,0:24:2.99:23,3,0	1/1:22,0:22:8.21:56,8,0	1/1:9,0:9:3.01:65,3,0	1/1:18,11:34:32.42:660,32,0	1/1:10,0:10:15.02:205,15,0	1/1:18,0:17:15.04:213,15,0	1/1:7,0:7:6.02:80,6,0	1/1:5,0:5:8.98:111,9,0
chr10	102662576	.	T	TG	2013.52	PASS	AB=0.667;AC=22;AF=0.393;AN=56;BaseQRankSum=-3.009;DP=270;FS=3.565;HRun=9;HaplotypeScore=43.6021;InbreedingCoeff=0.4664;MQ=91.85;MQ0=0;MQRankSum=-0.433;QD=14.28;ReadPosRankSum=-0.624;VQSLOD=3.0621;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:3,9:12:7.98:148,0,8	0/0:5,0:5:8.99:0,9,78	0/0:13,0:13:17.39:0,17,119	0/1:15,0:12:14.14:14,0,59	0/0:6,0:6:8.96:0,9,78	0/1:2,6:8:8.01:147,0,8	1/1:5,14:21:38.07:392,38,0	0/0:9,0:9:8.35:0,8,74	0/1:5,7:12:28.14:175,0,28	0/0:10,0:10:20.03:0,20,162	0/0:7,0:7:17.99:0,18,155	0/0:13,0:13:26.98:0,27,234	1/1:1,5:6:18.05:198,18,0	1/1:2,6:8:15.04:166,15,0	1/1:3,4:7:13.28:136,13,0	0/0:6,0:6:15:0,15,130	0/1:10,12:22:41.58:263,0,42	1/1:4,2:6:6.02:66,6,0	0/0:2,0:2:2.97:0,3,21	0/0:6,0:6:15:0,15,130	0/0:20,0:21:38.77:0,39,341	0/1:3,8:11:4.97:178,0,5	1/1:0,2:2:6.02:66,6,0	1/1:2,3:5:6.02:66,6,0	1/1:2,4:6:18.04:190,18,0	0/0:0,0:9:7.05:0,7,35	0/0:13,0:13:23.97:0,24,208	0/0:2,0:9:9.39:0,9,26
chr10	102663005	.	TG	T	10485.76	PASS	AB=0.862;AC=54;AF=0.964;AN=56;BaseQRankSum=0.242;DP=684;FS=8.520;HRun=1;HaplotypeScore=221.0234;InbreedingCoeff=-0.0363;MQ=71.91;MQ0=0;MQRankSum=-1.022;QD=15.33;ReadPosRankSum=2.326;VQSLOD=4.3192;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,30:60:90.79:648,91,0	1/1:10,2:12:31.85:250,32,0	0/1:10,2:13:61.64:62,0,128	0/1:15,3:18:29.89:30,0,122	1/1:16,8:24:51.90:384,52,0	1/1:16,8:24:51.23:398,51,0	1/1:9,11:20:31.96:252,32,0	1/1:7,19:26:52.87:285,53,0	1/1:14,7:21:47.31:325,47,0	1/1:16,10:26:58.26:454,58,0	1/1:14,7:21:39.64:333,40,0	1/1:18,8:26:64.10:537,64,0	1/1:17,9:26:52.11:376,52,0	1/1:20,14:34:64.20:458,64,0	1/1:24,6:30:70.81:624,71,0	1/1:20,7:27:62.91:514,63,0	1/1:25,10:35:71.12:536,71,0	1/1:20,7:27:67.28:452,67,0	1/1:7,11:18:45.84:312,46,0	1/1:16,5:21:38.50:390,39,0	1/1:27,9:36:68.71:521,69,0	1/1:13,6:19:39.26:310,39,0	1/1:11,6:17:35.56:273,36,0	1/1:20,14:34:55.31:439,55,0	1/1:8,2:10:24.79:196,25,0	1/1:22,11:33:75.27:674,75,0	1/1:15,2:17:41.41:281,41,0	1/1:9,0:9:20.90:173,21,0
chr10	102663008	.	C	CG	13376.63	PASS	AB=0.889;AC=54;AF=0.964;AN=56;BaseQRankSum=0.405;DP=706;FS=4.242;HRun=0;HaplotypeScore=224.6480;InbreedingCoeff=-0.0347;MQ=70.05;MQ0=0;MQRankSum=-5.828;QD=18.95;ReadPosRankSum=2.517;VQSLOD=4.8417;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,31:63:99:854,131,0	1/1:9,2:11:31.71:275,32,0	0/1:12,1:13:25.71:26,0,119	0/1:14,3:17:70.87:71,0,99	1/1:16,8:24:62.53:474,63,0	1/1:16,8:24:62.14:515,62,0	1/1:9,11:20:51.03:366,51,0	1/1:9,19:28:76.62:505,77,0	1/1:17,7:24:64.02:515,64,0	1/1:17,11:28:73.09:648,73,0	1/1:14,7:21:46.97:409,47,0	1/1:19,9:28:77.13:666,77,0	1/1:19,9:28:69.59:526,70,0	1/1:23,14:37:96.04:687,96,0	1/1:22,6:28:74.03:672,74,0	1/1:21,7:28:75.17:643,75,0	1/1:26,10:36:78.82:674,79,0	1/1:22,7:29:70.01:587,70,0	1/1:6,11:17:49.53:358,50,0	1/1:16,5:21:46.23:415,46,0	1/1:27,9:36:71.96:552,72,0	1/1:12,6:18:48.22:371,48,0	1/1:13,5:18:39.07:312,39,0	1/1:25,14:39:77.77:661,78,0	1/1:9,2:11:31.44:275,31,0	1/1:20,11:31:81.59:737,82,0	1/1:18,2:20:55.35:415,55,0	1/1:8,0:8:18.02:167,18,0
chr10	102663184	.	AG	A	14944.70	PASS	AB=0.900;AC=41;AF=0.732;AN=56;BaseQRankSum=11.166;DP=755;FS=2.168;HRun=3;HaplotypeScore=100.5327;InbreedingCoeff=0.9067;MQ=71.57;MQ0=0;MQRankSum=-2.165;QD=27.37;ReadPosRankSum=5.834;VQSLOD=3.8521;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,40:42:96.30:1182,96,0	0/1:16,2:18:22.56:23,0,553	0/0:32,0:22:54.23:0,54,535	0/0:22,0:20:36.63:0,37,378	0/0:39,0:39:99:0,109,1387	1/1:1,28:29:68.80:845,69,0	1/1:1,20:21:42.11:503,42,0	1/1:2,25:27:66.11:720,66,0	1/1:1,15:16:35.89:459,36,0	0/0:36,0:36:99:0,102,1351	0/0:24,0:24:65.21:0,65,857	0/0:28,0:28:69.26:0,69,1027	1/1:1,21:22:48.15:587,48,0	1/1:2,22:24:57.11:687,57,0	1/1:4,23:27:71.25:898,71,0	0/0:27,1:28:44.04:0,44,898	1/1:3,33:36:66.84:895,67,0	1/1:2,29:31:75.18:894,75,0	1/1:1,27:28:81.11:896,81,0	1/1:2,31:33:82.77:905,83,0	1/1:0,17:17:36.11:444,36,0	1/1:2,30:32:73.52:839,74,0	1/1:1,23:24:60.19:734,60,0	1/1:0,34:34:81.25:999,81,0	1/1:4,26:30:46.01:777,46,0	1/1:2,30:32:50.12:994,50,0	1/1:0,17:17:39.05:481,39,0	1/1:0,6:6:15.05:185,15,0
chr10	102663186	.	GGA	G	1560.85	PASS	AB=0.997;AC=31;AF=0.554;AN=56;BaseQRankSum=16.696;DP=754;FS=4.872;HRun=0;HaplotypeScore=160.5012;InbreedingCoeff=0.3788;MQ=70.52;MQ0=0;MQRankSum=-2.883;QD=2.93;ReadPosRankSum=9.473;VQSLOD=1.2507;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:42:36.28:112,36,0	0/0:18,0:18:43.37:0,43,829	0/0:33,0:23:60.97:0,61,789	0/0:20,0:18:44.77:0,45,576	0/0:39,0:39:99:0,114,1979	0/1:30,0:30:14.11:43,0,14	1/1:21,1:22:1.53:74,2,0	1/1:26,0:26:8.76:167,9,0	0/1:17,0:17:18:38,0,18	0/0:35,0:35:99:0,105,1865	0/0:22,0:22:66.15:0,66,1213	0/0:27,0:27:81.20:0,81,1440	1/1:21,0:21:23.93:70,24,0	1/1:22,1:23:31.17:117,31,0	1/1:26,0:26:22.99:120,23,0	0/0:28,0:28:78.89:0,79,1340	0/1:35,0:35:2.12:63,0,2	1/1:31,1:32:8.22:101,8,0	0/1:29,0:29:2.42:137,0,2	1/1:32,1:33:14.74:188,15,0	0/1:18,0:18:11.13:25,0,11	0/1:32,0:32:43.05:56,0,43	1/1:23,0:23:28:70,28,0	1/1:35,0:35:44.66:126,45,0	0/1:31,1:32:36.34:36,0,71	0/1:32,0:32:32.54:165,0,33	0/1:18,0:18:1.51:27,0,2	1/1:6,0:6:7.47:19,7,0
chr10	102663513	.	TC	T	1280.46	PASS	AB=0.525;AC=3;AF=0.054;AN=56;BaseQRankSum=9.321;DP=738;FS=28.850;HRun=1;HaplotypeScore=84.5752;InbreedingCoeff=0.8111;MQ=82.16;MQ0=0;MQRankSum=-0.131;QD=31.23;ReadPosRankSum=1.651;VQSLOD=1.8758;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:65:99:0,181,2794	0/0:7,0:7:21.07:0,21,333	0/0:27,0:27:75.25:0,75,1188	0/0:28,0:28:77.74:0,78,1205	0/0:29,0:29:87.30:0,87,1391	0/0:27,0:27:81.28:0,81,1293	0/0:29,0:29:75.24:0,75,1174	0/0:25,0:25:75.21:0,75,1158	0/0:37,0:37:99:0,111,1772	0/0:37,0:37:99:0,111,1751	0/0:17,0:17:51.17:0,51,813	0/0:33,0:33:99:0,99,1583	0/0:20,0:20:60.20:0,60,959	0/0:23,0:23:69.22:0,69,1079	0/0:25,0:25:72.25:0,72,1151	0/0:10,0:10:30.10:0,30,480	0/0:26,0:26:72.25:0,72,1149	0/0:25,0:25:72.20:0,72,1120	0/0:25,0:25:75.21:0,75,1105	0/0:27,0:27:81.25:0,81,1269	0/0:42,0:42:99:0,117,1845	0/0:30,0:30:90.31:0,90,1435	0/0:21,0:21:57.18:0,57,885	0/0:20,0:20:48.16:0,48,767	0/0:22,0:22:66.23:0,66,1055	0/1:3,29:32:1.66:1036,0,2	0/0:20,0:20:60.20:0,60,946	1/1:0,9:9:27.09:351,27,0
chr10	102663613	.	CCAAACAT	C	26222.59	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=14.012;DP=608;FS=7.090;HRun=0;HaplotypeScore=165.6171;InbreedingCoeff=0.9981;MQ=87.37;MQ0=0;MQRankSum=-18.353;QD=61.99;ReadPosRankSum=4.084;VQSLOD=4.6703;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,29:32:63.22:1659,63,0	0/0:11,0:11:33.11:0,33,1329	0/0:34,0:34:99:0,102,3626	0/0:26,0:26:78.27:0,78,2838	0/0:17,0:17:51.18:0,51,1984	1/1:4,17:21:51.18:1344,51,0	1/1:2,29:31:69.24:1819,69,0	1/1:2,16:18:45.15:1157,45,0	1/1:0,24:24:66.18:1641,66,0	0/0:26,0:26:72.25:0,72,2825	0/0:11,0:11:30.10:0,30,1157	0/0:39,0:39:99:0,114,4324	1/1:2,19:21:51.18:1344,51,0	1/1:0,17:17:42.14:1107,42,0	1/1:2,27:29:78.27:2056,78,0	0/0:21,0:21:60.21:0,60,2343	1/1:0,21:21:54.19:1423,54,0	1/1:5,18:23:51.17:1345,51,0	1/1:1,14:15:39.12:974,39,0	1/1:0,21:21:63.22:1660,63,0	1/1:2,11:13:20.40:552,20,0	1/1:4,24:28:60.20:1581,60,0	1/1:1,20:21:44.84:1186,45,0	1/1:4,14:18:20.59:552,21,0	1/1:1,16:17:48.16:1265,48,0	1/1:3,15:18:45.15:1186,45,0	1/1:1,23:24:63.22:1660,63,0	1/1:0,11:11:27.09:712,27,0
chr10	102663859	.	TG	T	11846.95	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=6.763;DP=601;FS=1.265;HRun=7;HaplotypeScore=65.3977;InbreedingCoeff=0.9946;MQ=72.12;MQ0=0;MQRankSum=-3.112;QD=25.75;ReadPosRankSum=3.862;VQSLOD=5.4641;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,38:41:87.20:888,87,0	0/0:4,0:4:12.04:0,12,148	0/0:24,0:24:43.20:0,43,624	0/0:12,0:12:29.45:0,29,332	0/0:17,0:17:51.14:0,51,615	1/1:2,17:19:48.11:489,48,0	1/1:2,25:27:66.15:673,66,0	1/1:5,20:25:42.07:428,42,0	1/1:2,19:21:48.11:490,48,0	0/0:23,0:23:60.17:0,60,730	0/0:15,0:15:42.12:0,42,511	0/0:24,0:25:65.38:0,65,761	1/1:1,12:13:36.08:367,36,0	1/1:0,21:21:57.13:581,57,0	1/1:1,21:22:31.56:525,32,0	0/0:21,0:21:63.19:0,63,780	1/1:4,28:32:78.18:796,78,0	1/1:0,26:26:75.17:765,75,0	1/1:1,18:19:54.12:550,54,0	1/1:0,14:14:39.09:398,39,0	1/1:2,32:34:87.20:888,87,0	1/1:1,18:19:51.12:520,51,0	1/1:0,19:19:54.12:551,54,0	1/1:1,35:36:93.21:949,93,0	1/1:1,15:16:45.10:459,45,0	1/1:2,11:13:33.07:337,33,0	1/1:1,27:28:72.16:734,72,0	1/1:0,15:15:45.10:459,45,0
chr10	102664836	.	G	GTGGGGACAGTAGCCC	66382.96	PASS	AB=0.744;AC=39;AF=0.696;AN=56;BaseQRankSum=-6.313;DP=723;FS=1.536;HRun=0;HaplotypeScore=266.0503;InbreedingCoeff=0.9120;MQ=73.10;MQ0=0;MQRankSum=-17.530;QD=127.91;ReadPosRankSum=1.202;VQSLOD=4.8176;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,17:50:99:5477,99,0	0/0:10,0:10:27.09:0,27,1022	0/0:22,0:23:23.07:0,23,1678	0/0:25,0:25:57.06:0,57,2116	0/0:30,0:30:81.26:0,81,3011	1/1:9,8:22:45.15:2860,45,0	1/1:22,10:39:84.29:5369,84,0	1/1:27,2:32:96.30:4677,96,0	1/1:17,15:36:93.75:6193,94,0	0/0:31,0:31:78.21:0,78,2931	0/0:17,0:17:51.18:0,51,2098	0/0:40,0:40:99:0,111,4405	1/1:10,6:19:39.09:2299,39,0	1/1:17,14:39:86.84:6026,87,0	1/1:9,10:22:54.14:3659,54,0	0/0:28,0:28:81.28:0,81,3463	1/1:6,5:14:30.10:2111,30,0	1/1:6,4:12:18.06:1172,18,0	1/1:14,4:21:54.18:3077,54,0	1/1:22,11:33:60.21:3553,60,0	1/1:13,5:25:30.06:1929,30,0	1/1:11,9:22:33.11:2345,33,0	1/1:7,6:16:18.06:1144,18,0	1/1:11,9:26:30.10:1874,30,0	1/1:12,9:23:48.12:2967,48,0	0/1:19,9:29:99:4740,0,183	1/1:9,9:20:47.87:3328,48,0	1/1:10,1:11:26.68:1585,27,0
chr10	102664999	.	TTCTCTCTCTC	T	475.29	PASS	AB=0.798;AC=11;AF=0.250;AN=44;BaseQRankSum=0.623;DP=588;FS=5.109;HRun=0;HaplotypeScore=158.0228;InbreedingCoeff=0.5628;MQ=55.41;MQ0=46;MQRankSum=-2.056;QD=3.35;ReadPosRankSum=-0.039;VQSLOD=2.3098;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:6:7.57:0,8,116	./.	./.	0/0:9,0:16:3:0,3,25	./.	1/1:18,12:28:6.02:168,6,0	0/0:28,0:27:30.06:0,30,638	0/0:15,7:18:0.47:0,0,1	0/0:24,0:23:31.87:0,32,862	0/0:11,0:11:9.03:0,9,268	0/0:11,0:11:18.06:0,18,435	1/1:13,2:15:2.39:18,2,0	1/1:21,1:22:5.96:45,6,0	0/1:8,10:16:0.33:0,0,0	0/0:26,0:25:33.11:0,33,1083	1/1:20,0:19:11.83:288,12,0	0/1:10,5:12:10.97:81,0,11	0/0:15,0:14:15.05:0,15,506	0/0:22,0:22:6.02:0,6,198	0/0:36,0:33:30.10:0,30,1100	0/1:21,0:20:0.01:0,0,1	./.	./.	0/0:8,8:17:0:0,0,0	0/0:24,0:23:43.39:0,43,1448	0/0:23,0:21:21.05:0,21,660	0/0:14,0:11:24.05:0,24,684
chr10	102665029	.	CTCTCTCTCTCTG	C	1199.42	PASS	AB=0.924;AC=22;AF=0.423;AN=52;BaseQRankSum=-0.870;DP=475;FS=12.113;HRun=0;HaplotypeScore=141.5193;InbreedingCoeff=0.6081;MQ=44.58;MQ0=28;MQRankSum=3.731;QD=4.51;ReadPosRankSum=-3.327;VQSLOD=1.1473;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:26:10.92:84,11,0	0/0:8,0:8:16.03:0,16,222	./.	./.	0/1:15,0:15:0.03:0,0,177	0/1:8,0:7:0:0,0,0	1/1:32,0:30:14.16:256,14,0	0/0:23,0:20:41.95:0,42,753	1/1:21,0:16:7.66:70,8,0	0/0:15,0:15:13.35:0,13,889	0/0:10,0:10:18.05:0,18,454	0/0:16,0:16:0.69:0,1,519	1/1:9,0:9:14.45:100,14,0	1/1:11,0:10:8.78:67,9,0	1/1:20,0:18:8.77:67,9,0	0/0:23,0:23:48.03:0,48,1519	0/1:21,0:20:0.48:386,0,0	1/1:19,0:16:6.82:197,7,0	0/0:12,0:12:7.26:0,7,617	0/0:9,0:9:6.02:0,6,198	0/0:33,0:29:14.86:0,15,1269	0/1:4,21:25:0.01:0,0,1	0/1:11,0:11:0.21:0,0,0	1/1:26,0:24:2.99:24,3,0	0/1:17,0:17:11.12:114,0,11	0/0:24,0:22:51.96:0,52,1625	0/0:16,0:15:27.05:0,27,735	0/0:14,0:12:27.04:0,27,721
chr10	102665031	.	CTCTCTCTCTGTG	C	866.04	PASS	AB=0.932;AC=17;AF=0.327;AN=52;BaseQRankSum=1.406;DP=460;FS=11.380;HRun=0;HaplotypeScore=136.5461;InbreedingCoeff=0.5152;MQ=44.61;MQ0=28;MQRankSum=2.406;QD=3.95;ReadPosRankSum=-2.168;VQSLOD=1.4123;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:26:7.67:75,8,0	0/0:7,0:7:14.74:0,15,203	./.	./.	0/0:14,0:14:11.67:0,12,224	0/1:8,0:7:0:0,0,0	1/1:29,0:27:8.24:186,8,0	0/0:23,0:20:36.05:0,36,581	0/1:22,0:17:0.88:1,0,13	0/0:14,0:14:32.90:0,33,774	0/0:10,0:10:18.06:0,18,432	0/0:16,0:16:27.79:0,28,533	1/1:9,0:9:12.24:138,12,0	1/1:10,0:9:6.65:53,7,0	0/1:19,0:17:7.70:81,0,8	0/0:22,0:22:51.10:0,51,1384	0/1:20,0:19:24.02:241,0,24	1/1:18,0:15:15.21:203,15,0	0/0:14,0:14:24.23:0,24,597	0/0:6,0:6:6.02:0,6,148	0/0:33,0:29:38.65:0,39,1195	0/1:25,0:25:0.01:0,0,1	0/1:3,8:11:0.21:0,0,0	0/0:26,0:24:0.03:0,0,0	0/1:16,0:17:40.79:43,0,41	0/0:22,0:20:52.06:0,52,1519	0/0:16,0:15:24.08:0,24,649	0/0:14,0:12:26.30:0,26,577
chr10	102665320	.	GGAA	G	1695.50	PASS	AB=0.928;AC=23;AF=0.411;AN=56;BaseQRankSum=9.425;DP=502;FS=1.283;HRun=0;HaplotypeScore=166.0085;InbreedingCoeff=-0.2862;MQ=44.50;MQ0=18;MQRankSum=-4.149;QD=4.66;ReadPosRankSum=3.884;VQSLOD=2.7590;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,1:27:63.20:63,0,150	0/0:11,0:11:33.10:0,33,656	0/0:21,0:10:21.05:0,21,398	0/0:17,0:8:13.65:0,14,328	0/0:15,0:15:30.10:0,30,630	0/1:11,3:14:17.62:97,0,18	0/1:21,0:21:72.80:73,0,107	0/1:22,0:12:32.80:33,0,62	1/1:15,2:17:1.69:133,2,0	0/0:18,0:18:51.15:0,51,1009	0/0:12,0:12:30.09:0,30,601	0/0:27,0:25:66.22:0,66,1348	0/1:13,1:14:67.65:113,0,68	0/1:9,2:11:10.12:121,0,10	0/1:16,2:18:23.65:99,0,24	0/0:17,0:17:51.16:0,51,1054	0/1:22,1:23:42.05:42,0,152	1/1:9,1:9:10.70:92,11,0	0/1:18,1:16:58.73:59,0,212	0/1:18,1:19:39.39:66,0,39	0/1:18,0:19:17.48:17,0,77	0/1:21,4:25:49.82:154,0,50	0/1:12,4:16:34.85:115,0,35	0/1:19,1:20:48.73:91,0,49	0/1:23,0:23:30.81:139,0,31	1/1:19,2:20:35.30:244,35,0	0/1:14,2:16:13.58:69,0,14	0/1:8,0:8:33.48:46,0,33
chr10	102665332	.	GGAA	G	2238.56	PASS	AB=0.913;AC=24;AF=0.429;AN=56;BaseQRankSum=12.378;DP=473;FS=2.311;HRun=0;HaplotypeScore=164.7978;InbreedingCoeff=-0.1406;MQ=42.28;MQ0=15;MQRankSum=-7.086;QD=6.56;ReadPosRankSum=5.148;VQSLOD=2.6738;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,1:26:43.05:43,0,147	0/0:11,0:11:30.10:0,30,658	0/0:11,1:8:17.80:0,18,248	0/0:18,0:7:21.03:0,21,303	0/0:13,0:13:33.10:0,33,713	0/1:7,3:10:14.98:98,0,15	0/1:19,0:19:71.46:71,0,81	0/1:26,0:14:15.77:16,0,59	1/1:13,2:15:5.67:143,6,0	0/0:17,0:17:51.18:0,51,1171	0/0:12,0:12:33.10:0,33,659	0/0:26,0:24:63.21:0,63,1275	0/1:12,2:14:57.63:142,0,58	0/1:8,2:10:8.61:114,0,9	0/1:18,2:20:8.52:183,0,9	0/0:22,0:22:63.21:0,63,1348	0/1:20,3:23:87.73:171,0,88	0/1:8,1:8:12.69:59,0,13	0/1:16,1:15:68.45:68,0,154	0/1:18,1:19:2.32:110,0,2	0/1:15,0:16:28.18:28,0,111	0/1:20,4:24:34.22:188,0,34	0/1:9,4:13:30.61:109,0,31	0/1:19,1:20:85.84:112,0,86	1/1:20,0:20:13.66:228,14,0	1/1:17,3:19:46.41:352,46,0	1/1:11,2:13:6.11:168,6,0	0/1:6,0:6:10.37:10,0,32
chr10	102665362	.	GGAAGAT	G	1982.41	PASS	AB=0.957;AC=34;AF=0.607;AN=56;BaseQRankSum=9.869;DP=356;FS=3.816;HRun=0;HaplotypeScore=160.6262;InbreedingCoeff=0.5805;MQ=55.23;MQ0=6;MQRankSum=-10.457;QD=8.93;ReadPosRankSum=1.706;VQSLOD=2.7079;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:0.90:35,1,0	0/0:6,0:6:18.01:0,18,384	0/0:27,0:17:35.58:0,36,622	0/0:24,0:11:26.28:0,26,525	0/0:9,0:9:18.04:0,18,464	1/1:11,0:11:19.09:111,19,0	1/1:10,0:10:9.97:54,10,0	1/1:5,0:2:5.98:62,6,0	1/1:8,0:8:6.02:104,6,0	0/0:16,0:16:42.11:0,42,1063	0/0:9,0:9:24.01:0,24,575	0/0:18,0:17:42.13:0,42,1179	1/1:15,0:15:24.51:121,25,0	1/1:6,0:6:8.99:96,9,0	1/1:10,1:11:11.52:77,12,0	0/0:22,0:22:66.18:0,66,1884	0/1:17,0:17:45.62:128,0,46	0/1:6,0:6:24.21:82,0,24	1/1:7,0:6:14.73:154,15,0	1/1:15,0:15:26.92:235,27,0	1/1:9,0:9:12.65:86,13,0	1/1:12,1:13:18.37:126,18,0	1/1:13,0:13:6.49:89,6,0	0/1:7,1:8:9.45:22,0,9	1/1:17,0:17:24.66:83,25,0	0/1:14,1:15:32.74:178,0,33	1/1:15,0:15:37.70:342,38,0	0/0:1,0:1:3:0,3,25
chr10	102665365	.	AGAT	A	582.01	PASS	AB=0.958;AC=34;AF=0.607;AN=56;BaseQRankSum=10.983;DP=323;FS=5.002;HRun=0;HaplotypeScore=135.9656;InbreedingCoeff=0.5512;MQ=58.87;MQ0=5;MQRankSum=-9.904;QD=3.13;ReadPosRankSum=2.955;VQSLOD=2.1344;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,1:18:5.49:27,5,0	0/0:7,0:7:21.01:0,21,342	0/0:29,0:17:44.42:0,44,740	0/0:26,0:12:21.60:0,22,453	0/0:10,0:10:21.05:0,21,395	1/1:8,2:10:8.55:31,9,0	1/1:9,0:9:1.48:4,1,0	0/1:4,1:2:0.86:1,0,11	1/1:3,2:5:5.97:45,6,0	0/0:15,0:15:42.13:0,42,827	0/0:9,0:9:23.96:0,24,403	0/0:18,0:17:45:0,45,867	0/1:14,0:14:3.82:17,0,4	1/1:3,1:4:6:55,6,0	1/1:7,0:7:3.24:36,3,0	0/0:22,0:22:66.19:0,66,1396	1/1:14,0:15:18.12:84,18,0	1/1:7,0:7:11.20:59,11,0	1/1:5,1:6:5.06:40,5,0	1/1:11,0:11:17.93:85,18,0	1/1:7,0:7:3.28:14,3,0	1/1:8,2:10:5.62:35,6,0	1/1:10,2:12:6.42:43,6,0	0/1:8,0:8:9.07:23,0,9	1/1:13,0:13:4.92:11,5,0	0/1:11,0:11:52.28:53,0,52	1/1:13,1:14:12.78:108,13,0	0/0:1,0:1:2.98:0,3,22
chr10	102665373	.	AAGAGG	A	1692.23	PASS	AB=0.940;AC=24;AF=0.429;AN=56;BaseQRankSum=9.636;DP=340;FS=0.495;HRun=0;HaplotypeScore=145.9809;InbreedingCoeff=0.0553;MQ=59.74;MQ0=4;MQRankSum=-8.222;QD=9.10;ReadPosRankSum=1.017;VQSLOD=2.8744;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,1:19:6.60:28,0,7	0/0:7,0:7:21.07:0,21,432	0/0:33,0:23:54.83:0,55,1226	0/0:30,0:14:20.13:0,20,711	0/0:11,0:11:26.95:0,27,454	0/1:8,2:10:15.26:98,0,15	1/1:9,0:9:1.55:39,2,0	0/0:3,1:2:5.60:0,6,41	1/1:4,2:6:4.24:74,4,0	0/0:18,0:18:51.14:0,51,1383	0/0:7,0:7:15.05:0,15,464	0/0:19,0:18:48.16:0,48,1006	0/1:15,0:15:21.56:159,0,22	1/1:4,1:5:9.02:131,9,0	0/1:8,0:8:6.92:112,0,7	0/0:23,0:23:66.20:0,66,1976	0/1:15,0:15:22.30:167,0,22	1/1:7,0:7:12.37:101,12,0	0/1:5,1:6:19.14:26,0,19	0/1:11,0:11:28:59,0,28	0/1:6,1:7:3.51:48,0,4	0/1:8,2:10:21.81:116,0,22	1/1:10,2:12:8.79:69,9,0	0/1:8,0:8:19.33:68,0,19	1/1:13,0:13:6.74:141,7,0	0/1:11,0:11:68.97:233,0,69	0/1:13,1:14:34.57:196,0,35	0/0:1,0:1:2.22:0,2,7
chr10	102665376	.	A	AG	4255.57	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=7.473;DP=367;FS=6.522;HRun=7;HaplotypeScore=135.3575;InbreedingCoeff=0.7848;MQ=58.71;MQ0=4;MQRankSum=-6.957;QD=16.24;ReadPosRankSum=1.086;VQSLOD=3.6083;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:19:5.99:51,6,0	1/1:1,9:10:18.06:217,18,0	0/0:31,0:22:40.30:0,40,379	0/0:28,0:14:7.23:0,7,173	1/1:2,11:13:24.03:273,24,0	1/1:10,0:10:23.91:193,24,0	1/1:13,0:13:23.99:205,24,0	1/1:7,0:5:8.92:64,9,0	1/1:6,0:6:5.64:21,6,0	0/0:16,0:16:45.07:0,45,435	0/0:6,0:6:12.02:0,12,116	1/1:2,19:20:42.13:505,42,0	1/1:19,0:19:53.94:460,54,0	1/1:5,0:5:5.91:39,6,0	1/1:12,0:12:26.82:231,27,0	0/0:22,0:22:51.06:0,51,492	1/1:15,0:15:32.89:261,33,0	1/1:7,0:7:5.50:44,6,0	1/1:10,0:11:24.04:162,24,0	1/1:12,0:12:23.93:195,24,0	1/1:7,0:8:13.72:100,14,0	1/1:11,0:11:21.75:194,22,0	1/1:13,0:13:5.25:23,5,0	1/1:7,0:7:8.04:60,8,0	1/1:16,0:16:41.79:375,42,0	1/1:12,0:12:6.95:232,7,0	1/1:14,0:15:41.73:347,42,0	0/0:0,0:1:2.04:0,2,6
chr10	102665378	.	G	GA	5797.75	PASS	AB=0.749;AC=42;AF=0.750;AN=56;BaseQRankSum=9.780;DP=395;FS=4.664;HRun=0;HaplotypeScore=128.5656;InbreedingCoeff=0.5540;MQ=58.22;MQ0=4;MQRankSum=-7.670;QD=19.99;ReadPosRankSum=3.622;VQSLOD=6.7713;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:20:10.43:100,10,0	0/1:10,0:10:7.79:38,0,8	0/0:30,0:22:45.09:0,45,570	0/0:28,0:13:30.06:0,30,309	1/1:14,0:14:8.54:67,9,0	1/1:3,7:10:23.91:317,24,0	1/1:4,10:14:20.80:278,21,0	0/1:7,2:6:21.80:105,0,22	1/1:3,0:9:8.24:48,8,0	0/0:17,0:18:45.15:0,45,628	0/0:6,0:6:15.04:0,15,194	1/1:21,0:20:13.23:115,13,0	1/1:1,18:19:53.66:729,54,0	1/1:2,1:9:8.94:91,9,0	1/1:4,10:14:30.01:398,30,0	0/0:23,0:23:63.15:0,63,816	1/1:6,9:16:36.09:503,36,0	1/1:4,2:6:6.73:108,7,0	0/1:5,7:12:2.95:319,0,3	1/1:3,10:13:6.20:322,6,0	1/1:4,5:9:14.96:175,15,0	1/1:5,7:12:26.66:344,27,0	1/1:3,2:14:5.81:42,6,0	1/1:1,1:12:9.01:113,9,0	1/1:0,18:18:39.13:575,39,0	0/1:2,10:12:5.44:451,0,5	1/1:3,13:16:25.23:551,25,0	1/1:1,0:1:2.50:9,2,0
chr10	102665381	.	G	GA	1477.21	PASS	AB=0.966;AC=34;AF=0.607;AN=56;BaseQRankSum=10.427;DP=397;FS=10.254;HRun=0;HaplotypeScore=142.4468;InbreedingCoeff=0.0572;MQ=57.17;MQ0=3;MQRankSum=-7.160;QD=4.97;ReadPosRankSum=6.502;VQSLOD=2.3987;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:4.08:15,4,0	1/1:9,0:9:14.97:56,15,0	0/0:29,0:21:45.05:0,45,555	0/0:23,0:12:24.90:0,25,258	0/1:13,0:13:3.69:62,0,4	1/1:9,1:10:19.22:103,19,0	0/1:11,4:15:16.85:64,0,17	0/1:8,0:5:15.89:16,0,20	0/1:10,0:10:32.01:39,0,32	0/0:21,0:21:54.14:0,54,699	0/0:5,0:5:12.04:0,12,168	0/1:22,0:21:7.49:122,0,7	1/1:18,1:19:39.09:187,39,0	0/1:9,0:9:13.82:14,0,17	0/1:14,1:15:23.06:23,0,64	0/0:22,0:22:60.13:0,60,784	0/1:17,0:17:58.59:59,0,66	1/1:4,2:6:11.46:91,11,0	0/1:12,0:12:45.18:77,0,45	1/1:11,2:13:21.46:123,21,0	1/1:9,1:10:4.23:83,4,0	0/1:12,1:13:13.56:53,0,14	1/1:14,0:14:5.68:38,6,0	0/1:13,0:13:14.94:26,0,15	1/1:18,0:18:7.67:89,8,0	0/1:13,1:14:38.88:80,0,39	1/1:16,0:16:31.90:229,32,0	1/1:1,0:1:2.50:9,2,0
chr10	102665402	.	AG	A	217.98	PASS	AB=0.741;AC=7;AF=0.125;AN=56;BaseQRankSum=6.410;DP=459;FS=5.827;HRun=2;HaplotypeScore=133.5746;InbreedingCoeff=0.2233;MQ=55.52;MQ0=5;MQRankSum=-3.383;QD=2.18;ReadPosRankSum=0.993;VQSLOD=-0.4143;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:24.08:0,24,358	0/0:11,0:11:27.09:0,27,403	0/0:27,0:18:36.11:0,36,521	0/1:37,0:16:28.71:29,0,293	0/0:16,0:16:45.15:0,45,674	0/0:11,0:11:33.11:0,33,490	0/0:21,0:21:51.13:0,51,732	0/1:10,4:10:12.66:13,0,22	0/0:15,0:15:30.10:0,30,446	0/0:28,0:28:84.28:0,84,1247	0/0:6,0:6:18.06:0,18,268	0/0:18,0:18:45.14:0,45,654	0/0:22,0:22:57.19:0,57,851	0/0:11,0:11:18.06:0,18,264	0/0:17,0:17:48.16:0,48,715	0/0:22,0:22:66.21:0,66,969	0/0:21,0:22:56.63:0,57,850	0/0:6,0:6:18.06:0,18,262	1/1:9,3:12:1.44:83,1,0	0/1:5,8:13:23.01:58,0,23	0/1:7,3:10:0.98:31,0,1	0/0:16,0:16:45.11:0,45,640	0/0:13,0:13:18.06:0,18,263	0/0:16,0:16:18.06:0,18,270	0/0:20,0:20:45.11:0,45,668	0/0:17,0:17:45.15:0,45,667	0/1:3,10:13:5.59:128,0,6	0/0:1,0:1:3.01:0,3,40
chr10	102665405	.	AGT	A	533.96	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.753;DP=462;FS=3.062;HRun=0;HaplotypeScore=138.1568;InbreedingCoeff=0.8634;MQ=55.76;MQ0=4;MQRankSum=-5.755;QD=8.09;ReadPosRankSum=-1.343;VQSLOD=2.9920;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:24.07:0,24,279	0/0:12,0:12:30.10:0,30,592	0/0:28,0:16:30.10:0,30,580	0/0:39,0:17:30.89:0,31,503	0/0:15,0:15:45.15:0,45,877	0/0:12,0:12:32.90:0,33,370	0/0:21,0:21:53.83:0,54,598	1/1:10,4:11:3.73:64,4,0	0/0:15,0:15:30.08:0,30,331	0/0:28,0:28:84.29:0,84,1627	0/0:5,0:5:15.05:0,15,298	0/0:17,0:17:42.14:0,42,838	0/0:21,0:21:39.19:0,39,660	0/0:11,0:11:18.03:0,18,201	0/0:17,0:17:48.12:0,48,531	0/0:22,0:22:66.23:0,66,1314	0/0:22,0:22:51.67:0,52,632	0/0:6,0:6:18.04:0,18,195	1/1:9,3:12:26.10:191,26,0	1/1:7,8:15:15.45:143,15,0	1/1:8,3:11:7.14:46,7,0	0/0:16,0:16:41.90:0,42,444	0/0:14,0:14:20.79:0,21,224	0/0:16,0:16:3.99:0,4,194	0/0:22,0:22:44.25:0,44,524	0/0:17,0:17:50.62:0,51,543	1/1:3,10:13:18.57:249,19,0	1/1:1,0:1:0.47:1,0,0
chr10	102665490	.	A	AGAGGAAGAG	16943.52	PASS	AB=0.776;AC=40;AF=0.714;AN=56;BaseQRankSum=-1.525;DP=590;FS=30.532;HRun=0;HaplotypeScore=154.0922;InbreedingCoeff=0.7631;MQ=52.43;MQ0=7;MQRankSum=-7.209;QD=37.40;ReadPosRankSum=-1.024;VQSLOD=2.6950;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,2:28:44.92:878,45,0	0/1:8,0:8:29.74:30,0,413	0/0:21,0:13:31.03:0,31,365	0/0:10,0:8:2.70:0,3,118	0/0:18,0:18:42.09:0,42,892	1/1:14,4:18:30.10:961,30,0	1/1:28,5:29:65.97:1453,66,0	1/1:26,0:22:42.06:757,42,0	1/1:12,5:17:24.05:732,24,0	0/0:28,0:28:69.21:0,69,1654	0/0:15,0:15:42.13:0,42,1055	0/0:23,0:22:54.06:0,54,1200	1/1:10,3:13:30.04:740,30,0	1/1:19,4:23:60.23:1316,60,0	1/1:7,20:29:17.90:827,18,0	0/0:21,0:21:47.89:0,48,1116	1/1:19,3:21:38.53:1009,39,0	1/1:5,8:17:6.02:280,6,0	1/1:5,9:19:21.89:647,22,0	1/1:8,13:21:20.97:460,21,0	1/1:11,22:34:8.99:133,9,0	1/1:6,12:20:20.56:364,21,0	1/1:15,5:20:48.14:1551,48,0	1/1:18,4:22:39:1067,39,0	1/1:14,5:19:36.09:1138,36,0	1/1:19,5:24:45.08:1154,45,0	0/1:3,5:16:76.17:271,0,76	1/1:4,14:20:27.09:1176,27,0
chr10	102666662	.	T	TACACAC	4419.36	PASS	AB=1.000;AC=29;AF=0.537;AN=54;BaseQRankSum=2.478;DP=549;FS=4.068;HRun=0;HaplotypeScore=149.6127;InbreedingCoeff=0.7761;MQ=56.42;MQ0=6;MQRankSum=-6.640;QD=15.67;ReadPosRankSum=-1.394;VQSLOD=4.2958;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,12:27:3.01:98,3,0	0/0:8,0:9:12.04:0,12,227	0/0:25,0:12:6.01:0,6,76	./.	0/0:25,0:25:42.59:0,43,675	1/1:7,10:18:9.92:274,10,0	1/1:21,0:21:15.03:192,15,0	0/0:34,0:33:32.99:0,33,423	1/1:16,1:18:27.09:632,27,0	0/0:19,0:19:33.06:0,33,536	0/0:22,0:22:45.03:0,45,724	0/0:12,0:12:18.06:0,18,321	1/1:5,10:15:12.04:382,12,0	1/1:13,0:13:11.75:213,12,0	1/1:8,1:16:9.03:189,9,0	0/0:11,0:11:18.05:0,18,264	1/1:16,1:18:18.05:328,18,0	1/1:24,0:27:45.06:813,45,0	0/0:18,0:18:15.05:0,15,205	0/0:23,0:24:4.26:0,4,45	0/0:17,0:18:12.01:0,12,140	1/1:9,5:15:6.02:188,6,0	1/1:12,0:13:12.04:227,12,0	1/1:16,7:27:18.06:544,18,0	1/1:9,8:18:6.02:194,6,0	0/1:25,0:26:23.02:23,0,182	0/0:27,0:26:11:0,11,135	1/1:9,0:9:9.03:124,9,0
chr10	102666688	.	CACACACAG	C	2841.79	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-0.145;DP=564;FS=5.593;HRun=0;HaplotypeScore=169.4570;InbreedingCoeff=-0.0005;MQ=49.55;MQ0=15;MQRankSum=2.658;QD=7.56;ReadPosRankSum=-3.940;VQSLOD=1.0493;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:94.28:94,0,184	0/0:6,0:6:18.03:0,18,484	0/0:16,0:6:11.21:0,11,240	0/0:19,0:8:18:0,18,195	0/0:23,0:23:50.86:0,51,1283	0/1:26,0:25:51.71:52,0,444	0/1:25,0:25:84.91:85,0,360	1/1:6,36:37:58.27:990,58,0	0/1:19,0:19:42.72:43,0,551	0/0:21,0:20:57.08:0,57,1405	0/0:19,0:19:52.03:0,52,1377	0/0:13,0:13:39.04:0,39,854	0/1:17,0:16:6.06:6,0,292	0/1:14,0:14:27.82:28,0,194	0/0:16,0:16:23.54:0,24,405	0/0:16,0:16:48.05:0,48,931	0/1:21,0:21:98.98:99,0,243	0/1:21,0:21:21.70:22,0,1012	1/1:5,18:20:51.06:645,51,0	1/1:1,18:19:9.43:129,9,0	0/1:21,0:20:99:305,0,105	0/1:14,0:14:29.36:29,0,285	0/1:13,0:12:22.68:23,0,148	0/1:24,0:24:47.22:47,0,161	0/1:20,0:19:99:141,0,216	0/0:25,0:25:53.47:0,53,795	1/1:2,23:25:11.50:285,11,0	0/0:14,0:14:32.90:0,33,544
chr10	102666690	.	C	CAG	707.22	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=6.967;DP=555;FS=19.076;HRun=0;HaplotypeScore=137.6394;InbreedingCoeff=0.3234;MQ=49.71;MQ0=15;MQRankSum=-5.082;QD=4.56;ReadPosRankSum=3.404;VQSLOD=1.9000;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:17.74:0,18,184	0/0:7,0:7:20.95:0,21,225	0/0:15,0:6:17.99:0,18,189	0/0:17,0:7:21:0,21,214	0/0:23,0:23:48.12:0,48,666	0/0:25,0:24:10.34:0,10,195	0/0:25,0:25:34.87:0,35,283	0/0:41,0:36:47.57:0,48,448	0/0:19,0:19:9.26:0,9,129	0/0:20,0:19:57.05:0,57,706	0/0:20,0:20:53.62:0,54,718	0/0:13,0:13:39:0,39,421	0/1:17,0:16:8.03:8,0,31	0/0:16,0:16:19.97:0,20,144	0/1:14,0:14:4.37:4,0,70	0/0:15,0:15:45:0,45,490	0/0:21,0:21:18.05:0,18,161	0/1:21,0:21:8.62:9,0,266	0/0:23,0:19:54.14:0,54,341	0/1:19,0:19:3.48:3,0,10	0/0:21,0:20:32.77:0,33,264	0/0:14,0:14:8.70:0,9,78	0/0:13,0:12:12:0,12,125	0/1:23,0:23:4.37:4,0,83	0/0:20,0:19:26.54:0,27,252	1/1:4,19:24:19.10:557,19,0	0/1:25,0:24:24.63:25,0,33	1/1:11,0:12:32.67:239,33,0
chr10	102666694	.	CAG	C	2565.68	PASS	AB=0.991;AC=27;AF=0.482;AN=56;BaseQRankSum=-0.877;DP=554;FS=0.421;HRun=0;HaplotypeScore=128.9305;InbreedingCoeff=0.2283;MQ=49.88;MQ0=15;MQRankSum=3.366;QD=6.51;ReadPosRankSum=-3.341;VQSLOD=2.1439;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,1:35:24.54:249,25,0	0/1:7,0:7:1.82:2,0,214	0/0:15,0:6:12.02:0,12,156	0/0:16,0:6:18.01:0,18,174	0/0:23,0:23:45.11:0,45,692	1/1:23,0:22:1.17:136,1,0	0/1:26,1:27:1.60:250,0,2	1/1:39,0:34:73.96:452,74,0	0/1:18,0:18:48.15:48,0,74	0/0:19,0:18:50.83:0,51,641	0/0:20,0:20:54.09:0,54,730	0/0:14,0:14:34.19:0,34,454	0/1:16,0:15:34.36:56,0,34	1/1:15,1:16:21.44:185,21,0	0/1:13,1:14:12.12:102,0,12	0/0:15,0:15:45.02:0,45,518	1/1:22,0:22:23.36:205,23,0	0/1:21,0:21:92.74:93,0,144	1/1:23,0:19:47.37:331,47,0	1/1:19,0:19:5.74:37,6,0	0/1:21,0:20:19.55:190,0,20	0/1:13,0:13:33.48:35,0,33	0/1:13,0:12:26.96:47,0,27	0/1:23,0:23:22.77:89,0,23	0/1:19,0:18:7.57:168,0,8	0/0:26,0:26:66.22:0,66,552	1/1:25,0:24:11:79,11,0	0/0:12,0:12:32.82:0,33,320
chr10	102667334	.	A	AG	2553.89	PASS	AB=0.759;AC=17;AF=0.304;AN=56;BaseQRankSum=16.723;DP=724;FS=10.683;HRun=1;HaplotypeScore=194.7028;InbreedingCoeff=-0.4381;MQ=59.08;MQ0=1;MQRankSum=-13.056;QD=5.10;ReadPosRankSum=2.161;VQSLOD=-0.5231;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:39,17:57:99:200,0,1068	0/0:6,0:6:18.06:0,18,233	0/0:25,0:21:46.61:0,47,603	0/0:34,0:31:71.73:0,72,838	0/0:13,0:13:39.11:0,39,490	0/1:19,8:27:99:128,0,439	0/1:33,10:43:99:219,0,916	0/1:26,7:33:99:239,0,772	0/1:20,13:33:99:285,0,603	0/0:30,0:30:87.27:0,87,1099	0/0:11,0:11:33.11:0,33,428	0/0:30,0:30:87.28:0,87,1126	0/1:15,14:29:99:236,0,393	0/1:23,10:33:99:191,0,682	0/1:31,11:42:99:209,0,889	0/0:24,0:24:69.22:0,69,894	0/1:14,7:20:99:167,0,342	0/1:17,5:22:99:104,0,545	0/1:19,6:22:99:104,0,582	0/1:10,5:16:99:100,0,253	0/0:19,1:20:15.29:0,15,442	0/1:25,7:31:77.17:77,0,519	0/1:12,7:19:99:105,0,194	0/1:16,13:29:89.27:89,0,288	0/1:8,9:16:99:110,0,150	0/0:24,0:24:69.22:0,69,895	0/1:17,6:23:99:152,0,298	0/0:6,0:6:18.06:0,18,233
chr10	102667337	.	G	GC	6032.65	PASS	AB=0.719;AC=18;AF=0.321;AN=56;BaseQRankSum=14.919;DP=729;FS=5.557;HRun=0;HaplotypeScore=191.0978;InbreedingCoeff=-0.4752;MQ=60.35;MQ0=1;MQRankSum=-13.190;QD=11.34;ReadPosRankSum=2.291;VQSLOD=5.0668;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:34,24:58:99:544,0,1111	0/0:5,0:5:15.05:0,15,210	0/0:22,0:20:41.30:0,41,579	0/0:34,0:31:79.12:0,79,991	0/0:12,0:12:36.12:0,36,503	0/1:17,9:26:99:330,0,472	0/1:27,15:42:99:408,0,931	0/1:24,12:36:99:369,0,834	0/1:18,17:35:99:499,0,641	0/0:30,0:30:90.27:0,90,1239	0/0:12,0:12:33.11:0,33,462	0/0:27,0:27:81.23:0,81,1111	0/1:18,14:32:99:441,0,425	0/1:22,12:34:99:426,0,720	0/1:27,15:42:99:460,0,909	0/0:25,0:25:69.23:0,69,963	0/1:13,9:21:99:295,0,355	0/1:15,7:22:99:205,0,586	0/1:19,7:23:99:284,0,560	0/1:5,11:16:99:286,0,215	0/1:21,2:23:94.91:95,0,496	0/1:19,13:31:99:163,0,579	0/1:11,8:19:99:256,0,209	0/1:19,13:32:99:357,0,280	0/1:7,9:15:99:241,0,154	0/0:23,0:23:69.23:0,69,965	0/1:8,11:19:99:373,0,232	0/0:7,0:7:21.07:0,21,291
chr10	102667351	.	GCGT	G	647.73	PASS	AB=0.957;AC=14;AF=0.250;AN=56;BaseQRankSum=3.888;DP=532;FS=6.012;HRun=0;HaplotypeScore=191.0352;InbreedingCoeff=-0.3329;MQ=69.08;MQ0=0;MQRankSum=-1.519;QD=2.20;ReadPosRankSum=-6.287;VQSLOD=-0.2153;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:39:99:141,0,1511	0/0:6,0:6:18.06:0,18,443	0/0:16,0:16:39.23:0,39,930	0/0:26,0:25:54.01:0,54,1499	0/0:11,0:11:33.11:0,33,812	0/1:16,0:16:15.41:15,0,648	0/1:26,0:27:70.37:70,0,1377	0/1:32,0:32:52.50:53,0,1891	0/1:19,0:20:53.15:53,0,1021	0/0:28,0:28:84.29:0,84,2027	0/0:11,0:11:33.11:0,33,812	0/0:26,0:26:75.24:0,75,1797	0/1:23,3:26:62.80:63,0,1347	0/1:17,0:17:76.98:77,0,938	0/1:20,0:22:45.01:45,0,1104	0/0:25,0:25:75.26:0,75,1847	0/1:16,0:15:18.59:19,0,744	0/1:13,0:14:85.40:85,0,686	0/0:14,0:12:33.11:0,33,802	0/0:13,0:13:36.12:0,36,881	0/0:15,0:15:12.42:0,12,660	0/1:18,0:18:55.16:55,0,809	0/1:9,4:13:12.15:12,0,472	0/1:23,0:23:40.73:41,0,840	0/1:11,0:10:73.99:74,0,417	0/0:27,0:27:81.28:0,81,1993	0/0:14,0:14:38.49:0,38,876	0/0:6,0:6:18.06:0,18,441
chr10	102667521	.	CG	C	2252.67	PASS	AB=0.667;AC=35;AF=0.673;AN=52;BaseQRankSum=5.777;DP=213;FS=13.838;HRun=2;HaplotypeScore=27.0202;InbreedingCoeff=0.7833;MQ=38.45;MQ0=20;MQRankSum=-4.576;QD=15.54;ReadPosRankSum=-0.683;VQSLOD=1.4851;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,8:11:18.02:213,18,0	0/0:4,0:4:9.01:0,9,134	1/1:3,0:2:4.82:17,5,0	./.	0/0:8,0:7:12.03:0,12,161	./.	1/1:5,3:6:14.91:136,15,0	1/1:2,19:19:47.89:484,48,0	1/1:1,4:5:3.01:38,3,0	0/0:12,0:12:33.04:0,33,413	0/0:8,0:8:18.03:0,18,228	0/0:11,0:11:23.73:0,24,278	1/1:2,0:2:5.94:41,6,0	1/1:3,2:5:8.94:78,9,0	1/1:2,1:3:8.96:80,9,0	0/0:5,0:5:14.93:0,15,175	1/1:5,7:8:21.01:225,21,0	0/1:2,2:4:5.40:63,0,5	1/1:7,1:6:11.83:93,12,0	1/1:5,6:10:20.91:198,21,0	1/1:9,3:6:14.94:143,15,0	1/1:3,9:11:15.01:174,15,0	1/1:4,4:7:11.99:122,12,0	1/1:4,4:7:9.43:93,9,0	1/1:1,4:5:11.97:133,12,0	0/0:10,0:8:17.71:0,18,214	1/1:4,3:5:9.03:116,9,0	0/0:8,0:6:17.99:0,18,185
chr10	102667616	.	C	CA	4889.94	PASS	AB=1.000;AC=37;AF=0.685;AN=54;BaseQRankSum=0.882;DP=284;FS=23.675;HRun=7;HaplotypeScore=70.2294;InbreedingCoeff=0.8456;MQ=71.00;MQ0=1;MQRankSum=-6.804;QD=23.29;ReadPosRankSum=0.690;VQSLOD=3.2215;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,10:11:21.06:253,21,0	0/0:2,0:2:5.98:0,6,50	0/1:17,0:11:0.95:1,0,98	0/0:22,1:18:0.92:0,1,157	0/0:5,0:5:15:0,15,138	1/1:2,8:10:24.03:273,24,0	1/1:2,9:11:27.08:326,27,0	1/1:3,14:16:39.07:469,39,0	1/1:0,10:10:24.07:290,24,0	0/0:13,0:13:27.01:0,27,261	0/0:7,0:7:12.02:0,12,116	0/0:5,0:5:8.97:0,9,87	1/1:6,10:16:30.09:362,30,0	1/1:1,11:12:15.05:181,15,0	1/1:1,4:4:9.03:109,9,0	0/0:9,0:9:27.04:0,27,261	1/1:1,16:17:47.88:542,48,0	1/1:0,5:5:12.04:144,12,0	1/1:4,3:7:9.03:109,9,0	1/1:0,9:9:24.07:283,24,0	1/1:0,7:7:18.06:220,18,0	1/1:2,7:8:21.06:254,21,0	1/1:3,10:13:27.01:294,27,0	1/1:0,10:10:21.06:253,21,0	1/1:4,8:12:21.02:237,21,0	0/0:9,0:9:21.03:0,21,203	1/1:3,8:11:24.07:289,24,0	./.
chr10	102667652	.	G	GGGAA	4385.34	PASS	AB=0.830;AC=30;AF=0.556;AN=54;BaseQRankSum=2.307;DP=173;FS=16.766;HRun=0;HaplotypeScore=46.1755;InbreedingCoeff=0.4901;MQ=54.96;MQ0=3;MQRankSum=-3.888;QD=32.48;ReadPosRankSum=1.378;VQSLOD=3.0307;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,5:11:6.07:416,6,0	0/0:1,0:1:3:0,3,25	0/0:9,0:7:17.08:0,17,205	0/0:6,0:4:3.01:0,3,57	0/0:1,0:1:3.01:0,3,57	0/1:6,1:7:2.96:218,0,3	1/1:6,1:7:14.97:180,15,0	0/1:11,2:10:15.98:243,0,16	1/1:3,0:3:3.01:48,3,0	0/0:5,0:5:9.02:0,9,113	0/0:4,0:4:6.02:0,6,100	0/0:3,0:3:5.91:0,6,69	1/1:5,3:8:21.03:358,21,0	1/1:2,5:7:21:409,21,0	1/1:1,3:3:12.03:238,12,0	0/0:7,0:7:18.94:0,19,300	1/1:7,2:9:17.95:249,18,0	./.	1/1:3,4:7:18.02:419,18,0	1/1:2,1:3:6.02:129,6,0	0/1:14,0:14:4.50:92,0,5	1/1:7,5:12:8.97:404,9,0	1/1:2,6:8:14.92:194,15,0	1/1:7,0:7:9.50:132,10,0	0/1:3,8:11:5.85:552,0,6	0/0:1,0:1:3:0,3,27	1/1:3,0:3:9:105,9,0	0/0:1,0:1:0.47:0,0,1
chr10	102667893	.	A	AACTCATAAAGTCC	46835.63	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-5.045;DP=482;FS=3.391;HRun=0;HaplotypeScore=144.5052;InbreedingCoeff=0.9003;MQ=76.72;MQ0=0;MQRankSum=-13.821;QD=124.90;ReadPosRankSum=1.231;VQSLOD=4.7599;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,5:19:33.11:1755,33,0	0/0:5,0:5:15.05:0,15,605	0/0:13,0:13:33.11:0,33,847	0/0:20,0:20:39:0,39,894	0/0:17,0:17:51.17:0,51,1875	1/1:7,10:20:48.16:2842,48,0	1/1:14,15:32:84.29:4797,84,0	1/1:21,6:34:99:4681,99,0	1/1:9,9:26:48.16:3119,48,0	0/0:12,0:12:36.12:0,36,1396	0/0:13,0:13:39.13:0,39,1504	0/0:12,0:12:30.10:0,30,1097	1/1:6,8:16:39.13:2284,39,0	1/1:5,7:16:30.10:1848,30,0	1/1:8,6:19:42.14:2604,42,0	0/1:14,0:14:44.33:44,0,1418	1/1:7,9:18:45.15:2874,45,0	1/1:8,4:14:27.09:1507,27,0	1/1:9,3:17:39.13:1759,39,0	1/1:7,11:21:51.18:2992,51,0	1/1:17,7:31:51.17:2739,51,0	1/1:4,14:20:51.18:3129,51,0	1/1:9,3:14:30.10:1489,30,0	1/1:6,4:10:21.07:1137,21,0	1/1:8,7:17:39.13:2376,39,0	0/0:13,0:13:39.13:0,39,1437	1/1:9,7:17:45.15:2860,45,0	0/0:2,0:2:6.02:0,6,242
chr10	102668178	.	G	GC	11819.19	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=7.196;DP=641;FS=3.034;HRun=7;HaplotypeScore=92.3794;InbreedingCoeff=0.9824;MQ=81.55;MQ0=1;MQRankSum=-2.337;QD=25.20;ReadPosRankSum=0.185;VQSLOD=5.0910;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,44:48:99:1450,120,0	0/0:5,0:5:15:0,15,137	0/0:16,0:16:15.92:0,16,349	0/0:22,0:22:48.06:0,48,458	0/0:23,0:23:57.06:0,57,542	1/1:1,16:17:48.15:580,48,0	1/1:2,28:30:75.23:904,75,0	1/1:7,1:22:43.77:265,44,0	1/1:1,23:24:66.14:779,66,0	0/0:20,0:20:54.08:0,54,518	0/0:12,0:12:33:0,33,309	0/0:28,0:28:72.06:0,72,686	1/1:4,11:15:7.14:358,7,0	1/1:1,17:19:54.16:643,54,0	1/1:5,21:26:51.16:614,51,0	0/0:11,0:11:27.04:0,27,261	1/1:1,35:36:99:1232,102,0	1/1:2,27:29:81.25:978,81,0	1/1:5,1:20:46.50:240,46,0	1/1:1,0:21:57.65:315,58,0	1/1:6,1:51:99:555,109,0	1/1:4,15:19:47.87:501,48,0	1/1:0,13:14:39.12:464,39,0	1/1:2,33:36:93.15:1101,93,0	1/1:5,24:29:63.06:724,63,0	0/0:24,0:24:63.09:0,63,604	1/1:3,0:12:22.97:117,23,0	0/0:11,0:11:30.04:0,30,289
chr10	102668859	.	AATG	A	3203.86	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.500;DP=517;FS=3.656;HRun=0;HaplotypeScore=78.1700;InbreedingCoeff=0.9936;MQ=89.24;MQ0=0;MQRankSum=-4.348;QD=34.08;ReadPosRankSum=-2.197;VQSLOD=3.5723;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.29:0,90,2003	0/0:5,0:5:15.05:0,15,346	0/0:16,0:16:45.14:0,45,920	0/0:26,0:26:78.24:0,78,1547	0/0:13,0:13:39.13:0,39,899	0/0:17,0:17:51.14:0,51,1031	0/0:28,0:28:84.29:0,84,1873	1/1:1,28:29:78.25:1273,78,0	0/0:24,0:24:69.24:0,69,1567	0/0:11,0:11:33.11:0,33,719	0/0:15,0:15:42.14:0,42,966	0/0:17,0:17:51.18:0,51,1167	0/0:10,0:10:30.10:0,30,681	0/0:12,0:12:36.12:0,36,829	0/0:12,0:12:36.12:0,36,830	0/0:23,0:23:69.24:0,69,1583	0/0:33,0:33:99:0,99,2214	0/0:18,0:18:51.17:0,51,1103	1/1:4,14:18:42.07:611,42,0	1/1:0,6:6:18.06:307,18,0	1/1:1,27:28:41.71:578,42,0	0/0:24,0:24:69.21:0,69,1485	0/0:14,0:14:42.14:0,42,967	0/0:34,0:34:99:0,99,2282	0/0:12,0:12:33.11:0,33,761	0/0:21,0:21:60.21:0,60,1380	1/1:0,13:13:36.12:609,36,0	0/0:8,0:8:24.08:0,24,509
chr10	102671149	.	TC	T	3693.49	PASS	AB=1.000;AC=31;AF=0.620;AN=50;BaseQRankSum=-0.656;DP=393;FS=9.250;HRun=14;HaplotypeScore=101.7742;InbreedingCoeff=0.6017;MQ=74.98;MQ0=0;MQRankSum=-0.486;QD=11.76;ReadPosRankSum=4.865;VQSLOD=2.6743;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,23:40:62.01:431,62,0	0/0:2,0:2:0:0,0,0	0/0:15,0:12:14.72:0,15,107	0/0:12,0:9:8.11:0,8,40	./.	1/1:2,9:11:26.76:185,27,0	1/1:5,24:29:53.36:369,53,0	0/0:11,0:11:0:0,0,0	1/1:13,18:31:65.17:448,65,0	0/0:11,0:11:0:0,0,0	0/0:2,0:2:0:0,0,0	1/1:9,0:9:1.16:3,1,0	1/1:9,12:21:29.56:205,30,0	1/1:6,9:15:29.70:205,30,0	1/1:5,18:23:53.45:369,53,0	0/0:4,0:4:5.95:0,6,44	1/1:8,20:28:59.44:411,59,0	1/1:3,22:25:53.53:370,54,0	0/1:19,0:19:3.62:4,0,28	0/1:4,0:4:0:0,0,0	0/0:13,0:13:0:0,0,0	1/1:3,10:13:23.78:164,24,0	1/1:0,1:1:2.97:20,3,0	1/1:7,24:31:65.25:448,65,0	1/1:3,3:6:8.87:62,9,0	./.	0/1:8,0:8:0.01:0,0,0	./.
chr10	102671341	.	T	TC	7532.36	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-11.962;DP=544;FS=8.843;HRun=7;HaplotypeScore=57.1751;InbreedingCoeff=0.9541;MQ=74.03;MQ0=0;MQRankSum=-0.976;QD=25.88;ReadPosRankSum=3.123;VQSLOD=5.3431;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,28:39:75.23:906,75,0	0/0:10,0:10:24.04:0,24,232	0/0:21,0:17:0.72:0,1,234	0/0:37,0:32:47.01:0,47,448	0/0:10,0:10:18.03:0,18,173	1/1:2,21:23:60.18:725,60,0	1/1:4,23:27:60.18:725,60,0	0/0:29,0:29:66.07:0,66,633	1/1:1,15:16:36.11:435,36,0	0/0:19,0:19:48.07:0,48,463	0/0:11,0:11:30.05:0,30,290	0/0:21,0:21:63.10:0,63,608	1/1:2,18:20:42.13:507,42,0	1/1:3,22:25:42.13:507,42,0	1/1:2,18:20:39.12:471,39,0	0/0:8,0:8:21.03:0,21,203	1/1:1,20:21:51.03:616,51,0	1/1:4,24:27:66.20:791,66,0	0/0:6,0:6:9:0,9,87	0/0:15,0:15:36.04:0,36,347	0/0:19,0:19:48.07:0,48,463	1/1:1,12:13:36.11:434,36,0	1/1:3,7:10:21.06:253,21,0	1/1:2,23:25:47.98:580,48,0	1/1:5,19:24:25.19:583,25,0	0/0:21,0:21:57.09:0,57,550	0/0:20,0:20:54.08:0,54,521	0/0:5,0:5:15.02:0,15,145
chr10	102671536	.	T	TAAG	2104.68	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=3.935;DP=454;FS=11.472;HRun=0;HaplotypeScore=95.3614;InbreedingCoeff=0.9036;MQ=76.56;MQ0=6;MQRankSum=-5.722;QD=20.84;ReadPosRankSum=-3.599;VQSLOD=2.0693;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:21.03:0,21,242	0/0:3,0:3:9.03:0,9,167	0/0:23,0:14:32.25:0,32,540	0/0:23,0:13:27.11:0,27,423	0/0:15,0:15:45.07:0,45,776	0/0:6,0:6:14.98:0,15,132	0/0:23,0:23:55.88:0,56,608	1/1:19,0:19:48.27:420,48,0	0/0:14,0:14:18.03:0,18,217	0/0:17,0:17:51.11:0,51,826	0/0:7,0:7:21.05:0,21,359	0/0:21,0:21:63.20:0,63,1130	0/0:15,0:15:17.73:0,18,188	0/0:26,0:26:33.19:0,33,406	0/0:12,0:12:18:0,18,199	0/0:16,0:16:48.15:0,48,857	0/0:26,0:26:39.04:0,39,493	0/0:23,0:23:36.08:0,36,472	1/1:14,2:16:44.51:444,45,0	1/1:8,2:10:26.93:289,27,0	1/1:37,4:41:92.09:721,92,0	0/0:7,0:6:8.76:0,9,109	0/0:5,0:5:6.02:0,6,84	0/0:27,0:27:26.99:0,27,333	0/0:2,0:2:6:0,6,52	0/0:14,0:14:39.11:0,39,619	1/1:11,4:12:38.26:405,38,0	0/0:3,0:3:9.03:0,9,177
chr10	102671539	.	GGAA	G	4275.13	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=4.270;DP=462;FS=17.576;HRun=0;HaplotypeScore=83.3573;InbreedingCoeff=0.3686;MQ=75.34;MQ0=8;MQRankSum=-2.009;QD=13.24;ReadPosRankSum=0.371;VQSLOD=3.1037;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:15.04:232,15,0	0/0:3,0:3:9.01:0,9,161	0/0:23,0:14:23.65:0,24,267	0/0:23,0:12:8.07:0,8,231	0/0:18,0:18:48.48:0,48,602	0/1:7,0:7:15.87:88,0,16	0/1:21,0:21:99:263,0,143	0/1:19,0:19:30.93:252,0,31	1/1:0,12:12:12.04:204,12,0	0/0:15,0:15:41.84:0,42,562	0/0:7,0:7:18.02:0,18,243	0/0:22,0:22:63.09:0,63,1037	1/1:3,13:16:9.29:154,9,0	1/1:1,26:27:30.24:478,30,0	1/1:2,11:13:9.03:154,9,0	0/0:17,0:17:48.10:0,48,921	1/1:1,28:29:36.10:612,36,0	1/1:2,21:23:33.11:561,33,0	0/1:18,0:18:40.78:210,0,41	0/1:10,0:10:21.06:98,0,21	0/1:41,0:40:12.16:292,0,12	1/1:1,5:5:5.70:102,6,0	1/1:0,5:5:6.02:102,6,0	1/1:3,27:29:8.93:365,9,0	1/1:2,0:2:5.99:50,6,0	0/0:11,0:11:12.78:0,13,129	0/1:15,0:12:58.69:59,0,68	0/1:3,0:3:1.22:1,0,43
chr10	102671542	.	AGAGGAG	A	313.48	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-1.766;DP=462;FS=12.116;HRun=0;HaplotypeScore=116.9176;InbreedingCoeff=0.4610;MQ=73.30;MQ0=8;MQRankSum=-4.090;QD=7.84;ReadPosRankSum=0.214;VQSLOD=1.0645;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:30.95:31,0,139	0/0:3,0:3:9.02:0,9,224	0/0:22,0:12:2.04:0,2,6	0/0:23,0:13:12.90:0,13,206	0/0:20,0:20:27.08:0,27,684	0/0:7,0:7:11.90:0,12,177	0/0:22,0:22:21:0,21,604	0/0:19,0:19:30.06:0,30,510	0/0:12,0:12:12.03:0,12,132	0/0:16,0:16:21.06:0,21,515	0/0:6,0:6:12.04:0,12,285	0/0:21,0:21:42.14:0,42,1265	0/0:13,0:13:8.78:0,9,99	0/0:27,0:27:26.55:0,27,296	0/0:11,0:11:8.92:0,9,86	0/0:17,0:17:39.13:0,39,1263	0/0:29,0:29:36.10:0,36,396	0/0:22,0:22:36.07:0,36,387	0/0:18,0:18:27.07:0,27,528	0/0:9,0:9:6.02:0,6,150	0/0:43,0:42:35.95:0,36,641	0/0:7,0:6:6.02:0,6,66	0/0:5,0:5:5.64:0,6,66	0/0:31,0:30:27.07:0,27,336	0/0:2,0:2:3:0,3,26	1/1:5,6:11:18.02:334,18,0	0/0:15,0:12:24.08:0,24,533	1/1:3,0:3:3.01:63,3,0
chr10	102671555	.	G	GAGA	1239.12	PASS	AB=0.912;AC=6;AF=0.107;AN=56;BaseQRankSum=2.670;DP=501;FS=0.000;HRun=0;HaplotypeScore=106.6385;InbreedingCoeff=0.2376;MQ=65.45;MQ0=12;MQRankSum=-1.990;QD=10.77;ReadPosRankSum=-1.112;VQSLOD=3.0207;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:50.84:0,51,471	0/0:6,0:6:17.97:0,18,199	0/0:24,0:8:3:0,3,26	0/0:31,0:17:17.78:0,18,214	0/0:17,0:17:36.02:0,36,467	0/0:18,0:18:38.87:0,39,332	0/0:17,0:17:42:0,42,482	0/1:23,0:24:83.18:213,0,83	0/0:12,0:12:18.04:0,18,214	0/0:16,0:16:45.08:0,45,515	0/0:8,0:8:24.01:0,24,257	0/0:22,0:22:63:0,63,822	0/0:12,0:12:14.99:0,15,170	0/0:24,0:24:39.30:0,39,438	0/0:7,0:7:9.03:0,9,121	0/0:17,0:17:48.13:0,48,739	0/0:26,0:26:42.99:0,43,521	0/0:24,0:24:45.06:0,45,533	0/1:16,2:18:60.89:313,0,61	1/1:8,2:10:17.51:197,18,0	0/1:45,4:46:99:344,0,170	0/0:9,0:8:8.75:0,9,100	0/0:6,0:6:9.01:0,9,105	0/0:34,0:33:41.99:0,42,460	0/0:6,0:6:15:0,15,131	0/0:10,0:10:26.91:0,27,220	0/1:11,3:11:6.85:301,0,7	0/0:8,0:8:20.97:0,21,175
chr10	102671993	.	CGT	C	3660.81	PASS	AB=1.000;AC=34;AF=0.630;AN=54;BaseQRankSum=3.361;DP=487;FS=0.543;HRun=0;HaplotypeScore=71.2932;InbreedingCoeff=0.6904;MQ=74.96;MQ0=17;MQRankSum=-0.173;QD=10.96;ReadPosRankSum=0.503;VQSLOD=3.1824;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:11,0:10:30.10:0,30,457	0/1:33,0:15:19.88:20,0,257	0/1:36,0:13:12.84:13,0,115	0/0:16,0:16:38.93:0,39,533	1/1:8,0:8:21.07:286,21,0	1/1:25,0:25:12:112,12,0	1/1:1,14:15:39.13:515,39,0	1/1:16,0:16:41.91:546,42,0	0/0:21,0:21:63.21:0,63,1049	0/0:7,0:7:16.97:0,17,270	0/0:12,0:12:30.32:0,30,412	1/1:18,0:17:11.57:124,12,0	1/1:15,0:15:8.88:71,9,0	1/1:16,0:16:9.02:90,9,0	0/0:12,0:12:33.03:0,33,492	1/1:22,0:21:9.02:95,9,0	0/0:19,0:18:0.47:0,0,1	1/1:4,7:11:17.83:267,18,0	1/1:0,10:10:5.76:63,6,0	1/1:33,2:33:65.81:752,66,0	1/1:12,0:12:3.01:32,3,0	1/1:11,0:9:3.01:30,3,0	1/1:22,1:23:33.11:451,33,0	1/1:23,0:23:6.02:70,6,0	0/0:15,0:15:35.63:0,36,505	1/1:5,0:4:9.92:124,10,0	0/0:11,0:10:27.05:0,27,378
chr10	102671997	.	TGTACACAC	T	2723	PASS	AB=0.951;AC=29;AF=0.518;AN=56;BaseQRankSum=2.798;DP=513;FS=2.482;HRun=0;HaplotypeScore=107.3105;InbreedingCoeff=0.1186;MQ=69.83;MQ0=17;MQRankSum=-1.624;QD=7.24;ReadPosRankSum=1.540;VQSLOD=1.9317;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:4,30:33:0.89:0,1,2	0/0:11,0:10:30.10:0,30,631	0/1:31,0:13:19.88:20,0,258	0/1:32,0:10:12.76:13,0,114	0/0:17,0:17:42.13:0,42,1017	1/1:8,0:8:19.82:230,20,0	0/1:2,1:28:20.31:20,0,32	0/1:17,0:16:8.69:470,0,9	0/1:17,0:18:0.05:321,0,0	0/0:21,0:21:63.22:0,63,1674	0/0:8,0:8:24.08:0,24,590	0/0:17,0:17:42.13:0,42,1131	1/1:1,0:16:11.53:121,12,0	1/1:13,0:14:8.95:75,9,0	1/1:3,0:16:7.10:93,7,0	0/0:11,0:11:33.11:0,33,905	1/1:2,20:22:9.03:217,9,0	0/0:3,15:17:0.47:0,0,1	0/1:10,0:10:99:211,0,165	0/1:14,0:14:12.45:12,0,117	0/1:38,0:36:99:300,0,658	1/1:1,0:14:3.01:32,3,0	1/1:3,0:9:2.79:32,3,0	1/1:24,1:25:35.86:453,36,0	1/1:4,20:26:5.90:37,6,0	0/1:15,0:15:84.55:85,0,314	0/1:7,0:6:95.39:107,0,95	0/1:11,0:10:47.34:47,0,305
chr10	102671998	.	GTACACA	G	1692.90	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=6.854;DP=518;FS=1.748;HRun=0;HaplotypeScore=102.1705;InbreedingCoeff=0.1839;MQ=69.69;MQ0=17;MQRankSum=-1.893;QD=4.43;ReadPosRankSum=1.260;VQSLOD=1.6552;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:0.47:0,0,1	0/0:11,0:10:29.92:0,30,387	0/1:30,0:13:11.36:11,0,110	0/1:33,0:10:4.10:4,0,45	0/0:16,0:16:38.96:0,39,711	0/1:9,0:9:12.97:77,0,13	0/1:28,0:28:7.39:50,0,7	0/1:17,0:16:12.75:178,0,13	1/1:18,0:18:35.17:204,35,0	0/0:21,0:21:63.11:0,63,1166	0/0:8,0:8:23.99:0,24,439	0/0:18,0:18:39.10:0,39,864	1/1:17,0:16:11.71:222,12,0	1/1:1,12:13:5.92:128,6,0	1/1:15,1:16:7.29:175,7,0	0/0:11,0:11:33.03:0,33,650	1/1:23,0:22:8.98:105,9,0	1/1:18,0:17:4.94:22,5,0	0/1:10,0:10:77.15:77,0,168	0/0:17,0:17:15.52:0,16,403	0/1:39,0:37:87.98:88,0,592	1/1:14,0:14:2.87:15,3,0	1/1:11,0:9:3.01:60,3,0	1/1:26,0:26:35.08:280,35,0	1/1:25,1:26:6.02:74,6,0	0/1:15,0:15:49.15:49,0,181	0/1:8,0:7:35.75:36,0,93	0/1:11,0:10:19.16:19,0,142
chr10	102671999	.	TACACACAC	T	499.96	PASS	AC=8;AF=0.167;AN=48;BaseQRankSum=1.930;DP=527;FS=2.952;HRun=0;HaplotypeScore=120.1000;InbreedingCoeff=0.6687;MQ=68.32;MQ0=17;MQRankSum=-3.760;QD=8.47;ReadPosRankSum=1.193;VQSLOD=2.4372;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:0.89:0,1,2	0/0:11,0:10:9.03:0,9,258	./.	./.	0/0:16,0:16:18.06:0,18,630	0/0:10,0:10:12.03:0,12,201	0/0:28,0:28:10.28:0,10,162	0/0:19,0:18:12.51:0,13,318	0/0:17,0:19:23.81:0,24,293	0/0:22,0:22:30.10:0,30,943	0/0:8,0:8:12.04:0,12,410	0/0:17,0:17:33.11:0,33,984	0/0:18,0:17:7.01:0,7,40	1/1:13,0:13:1.75:13,2,0	0/0:16,0:16:3.02:0,3,7	0/0:11,0:12:18.06:0,18,677	1/1:23,0:22:8.98:130,9,0	./.	0/0:11,0:11:12.04:0,12,421	0/0:18,0:18:15.05:0,15,577	0/0:40,0:38:49.11:0,49,1544	./.	0/0:11,0:9:0.78:0,1,2	0/0:19,0:26:8.86:0,9,58	0/0:26,0:26:5.87:0,6,35	1/1:8,6:15:17.71:336,18,0	0/0:10,0:9:12.04:0,12,389	1/1:5,3:7:6.02:149,6,0
chr10	102673239	.	T	TG	1362.51	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.791;DP=686;FS=2.108;HRun=3;HaplotypeScore=71.3533;InbreedingCoeff=0.9979;MQ=81.84;MQ0=0;MQRankSum=0.119;QD=40.07;ReadPosRankSum=-0.329;VQSLOD=3.2678;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1479	0/0:12,0:12:36.12:0,36,463	0/0:31,0:31:73.08:0,73,843	0/0:21,0:21:22.35:0,22,440	0/0:16,0:16:45.14:0,45,576	0/0:19,0:19:54.18:0,54,700	0/0:29,0:28:84.26:0,84,1075	0/0:31,0:31:93.30:0,93,1206	0/0:25,0:25:64.50:0,64,886	0/0:18,0:18:51.17:0,51,662	0/0:18,0:18:54.16:0,54,685	0/0:27,0:27:81.22:0,81,1009	0/0:26,0:26:72.22:0,72,919	0/0:30,0:30:87.27:0,87,1113	0/0:33,0:33:99:0,99,1282	0/0:31,0:31:84.27:0,84,1091	0/0:32,0:32:87.28:0,87,1126	0/0:23,0:23:69.22:0,69,892	0/0:22,0:22:66.21:0,66,843	0/0:21,0:21:63.19:0,63,803	0/0:39,0:39:99:0,114,1464	0/0:14,0:14:42.14:0,42,544	0/0:14,0:14:39.13:0,39,504	0/0:34,0:34:99:0,99,1269	0/0:11,0:11:33.11:0,33,428	1/1:0,23:23:69.23:1034,69,0	0/0:35,0:35:99:0,99,1282	1/1:0,11:11:30.10:450,30,0
chr10	102673540	.	GC	G	7299.46	PASS	AC=38;AF=0.704;AN=54;BaseQRankSum=-1.333;DP=434;FS=1.034;HRun=8;HaplotypeScore=52.5537;InbreedingCoeff=0.9831;MQ=77.67;MQ0=1;MQRankSum=-0.707;QD=21.72;ReadPosRankSum=4.507;VQSLOD=4.9673;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:23:48.07:462,48,0	0/0:5,0:5:12.04:0,12,145	0/0:18,0:15:14.63:0,15,319	0/0:18,0:19:44.11:0,44,404	0/0:15,0:15:36.08:0,36,401	1/1:1,10:11:24.04:232,24,0	1/1:1,34:35:87.14:840,87,0	1/1:7,14:21:42.04:397,42,0	1/1:1,17:18:48.08:463,48,0	0/0:8,0:8:19.29:0,19,207	0/0:10,0:10:18.06:0,18,217	0/0:14,0:14:39.12:0,39,469	1/1:0,14:14:30.05:289,30,0	1/1:1,9:10:24.04:232,24,0	1/1:3,13:16:30.05:290,30,0	0/0:9,0:8:24.07:0,24,289	1/1:3,22:25:60.09:579,60,0	1/1:0,18:18:48.08:463,48,0	1/1:7,14:21:41.64:384,42,0	1/1:2,10:12:27.02:256,27,0	1/1:3,19:22:45.07:435,45,0	1/1:1,6:7:18.02:169,18,0	1/1:0,8:8:15.02:145,15,0	1/1:1,23:24:60.09:579,60,0	1/1:3,9:12:21.03:203,21,0	1/1:2,15:17:45.05:426,45,0	1/1:2,20:22:48.05:456,48,0	./.
chr10	102673925	.	CCTCCCTACAAGGAGTG	C	1019.91	PASS	AB=0.970;AC=12;AF=0.214;AN=56;BaseQRankSum=8.204;DP=600;FS=3.408;HRun=0;HaplotypeScore=233.1948;InbreedingCoeff=-0.2598;MQ=56.86;MQ0=12;MQRankSum=-0.897;QD=3.85;ReadPosRankSum=-1.889;VQSLOD=2.3866;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:21:84.75:85,0,634	0/0:7,0:7:18.03:0,18,407	0/0:29,0:8:11.72:0,12,103	0/0:32,0:8:12.64:0,13,107	0/0:6,0:6:15.04:0,15,322	0/1:22,0:21:99:112,0,424	0/1:19,0:16:26.20:26,0,425	0/0:18,0:18:35.58:0,36,600	0/1:23,0:21:99:155,0,517	0/0:18,0:18:45.14:0,45,1188	0/0:14,0:14:36.08:0,36,876	0/0:19,0:19:31.81:0,32,1125	0/1:19,0:18:20.68:21,0,664	0/1:31,0:25:99:187,0,688	0/1:27,0:23:99:149,0,457	0/0:17,0:17:48.14:0,48,1376	0/1:23,0:21:41.90:42,0,502	0/1:21,0:20:99:104,0,562	0/0:28,0:26:66.06:0,66,1612	0/0:14,0:14:35.97:0,36,880	0/0:71,0:68:99:0,165,3886	0/1:10,13:21:99:103,0,307	0/0:7,6:12:12.49:0,12,193	0/0:19,0:17:6:0,6,318	0/1:13,0:10:23.03:23,0,296	0/1:15,0:12:6.04:163,0,6	0/0:22,0:22:66.19:0,66,1884	0/0:8,0:7:2.99:0,3,23
chr10	102673952	.	GGGGTGCTCCCTACAAT	G	704.56	PASS	AB=0.940;AC=8;AF=0.143;AN=56;BaseQRankSum=7.382;DP=605;FS=11.053;HRun=0;HaplotypeScore=250.5857;InbreedingCoeff=0.0988;MQ=59.51;MQ0=13;MQRankSum=-6.027;QD=5.59;ReadPosRankSum=2.998;VQSLOD=1.1834;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:22:71.59:72,0,383	0/0:11,0:11:27.09:0,27,672	0/0:23,0:10:28.24:0,28,464	0/0:22,0:11:14.40:0,14,370	0/0:8,0:8:21:0,21,561	0/0:20,0:19:17.16:0,17,399	0/0:18,0:13:30.60:0,31,275	0/0:23,0:22:58.96:0,59,1087	0/1:27,0:25:27.73:28,0,323	0/0:18,0:17:50.18:0,50,1159	0/0:13,0:13:39.13:0,39,1217	0/0:23,0:23:69.20:0,69,1553	0/1:21,0:20:22.21:22,0,421	0/0:26,0:20:13.91:0,14,470	0/0:30,0:27:18.55:0,19,551	0/0:20,0:20:60.19:0,60,1578	0/0:27,0:25:15.41:0,15,500	0/0:20,0:19:38.78:0,39,595	0/0:33,0:30:84.15:0,84,2094	0/0:12,0:12:36.11:0,36,1061	0/0:71,0:68:99:0,177,4174	0/0:26,0:24:35.01:0,35,398	0/0:13,0:12:16.28:0,16,163	0/1:17,0:15:21.25:21,0,306	0/1:12,0:10:13.07:13,0,195	0/1:7,9:13:15.87:539,0,16	0/0:22,0:22:66.22:0,66,2077	1/1:5,0:4:9.03:147,9,0
chr10	102674650	.	CCACACACACA	C	4103.32	PASS	AB=1.000;AC=19;AF=0.365;AN=52;BaseQRankSum=-2.552;DP=529;FS=16.104;HRun=0;HaplotypeScore=124.8687;InbreedingCoeff=0.3373;MQ=69.19;MQ0=56;MQRankSum=2.953;QD=15.54;ReadPosRankSum=1.801;VQSLOD=1.7439;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:30:21.45:579,21,0	0/0:3,0:2:2.90:0,3,16	0/0:28,0:16:9.82:0,10,66	0/0:47,0:34:11.93:0,12,88	0/0:9,0:8:11.99:0,12,112	0/1:13,0:12:13.61:52,0,14	1/1:38,0:37:0.91:583,1,0	0/0:9,0:7:3:0,3,26	1/1:22,0:19:5.05:448,5,0	0/0:11,0:8:17.99:0,18,275	0/0:4,0:2:3.01:0,3,45	0/0:19,0:14:15.52:0,16,201	1/1:14,0:13:20.68:379,21,0	0/1:24,0:22:32.85:153,0,33	1/1:15,0:15:24.02:343,24,0	0/0:14,0:12:2.72:0,3,226	0/1:25,0:24:9.97:238,0,10	0/1:21,0:20:22.56:368,0,23	0/0:6,0:6:8.88:0,9,61	./.	0/0:57,0:52:9.69:0,10,45	0/0:5,8:11:0.47:0,0,1	./.	1/1:38,0:37:2.85:724,3,0	1/1:11,0:11:7.51:235,8,0	0/0:16,0:14:7.09:0,7,60	0/0:10,0:6:2.46:0,2,23	0/1:8,0:5:0.42:0,0,115
chr10	102674679	.	C	CAT	2976.63	PASS	AB=0.912;AC=14;AF=0.280;AN=50;BaseQRankSum=-3.099;DP=724;FS=21.807;HRun=0;HaplotypeScore=66.2223;InbreedingCoeff=0.0463;MQ=35.86;MQ0=281;MQRankSum=4.353;QD=7.90;ReadPosRankSum=3.452;VQSLOD=1.5754;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:39,2:29:21.36:437,21,0	0/0:16,0:4:2.78:0,3,23	0/0:7,0:4:8.93:0,9,65	0/0:9,0:4:11.93:0,12,88	0/0:24,0:13:11.93:0,12,101	0/1:12,4:8:14.05:52,0,14	1/1:46,5:36:0.58:460,1,0	0/0:5,0:1:3:0,3,26	0/1:24,13:25:37.44:360,0,37	0/0:35,0:13:31.68:0,32,291	0/0:12,0:4:3.01:0,3,43	0/0:36,0:20:21.51:0,22,265	0/1:26,1:18:34.69:263,0,35	0/1:37,2:26:48.10:126,0,48	1/1:28,0:15:21.80:271,22,0	0/0:18,0:11:8.37:0,8,176	0/1:32,1:20:10.12:214,0,10	0/1:28,3:18:50.69:237,0,51	0/0:8,0:5:14.85:0,15,105	./.	0/0:68,0:39:45.88:0,46,340	./.	./.	0/1:41,2:32:50.41:559,0,50	0/1:31,0:19:46.62:149,0,47	0/0:25,0:11:27.56:0,28,188	0/0:12,0:4:8.01:0,8,52	0/0:18,0:5:3.71:0,4,63
chr10	102674689	.	CAT	C	1723.13	PASS	AB=0.973;AC=27;AF=0.614;AN=44;BaseQRankSum=2.006;DP=698;FS=8.099;HRun=0;HaplotypeScore=71.2758;InbreedingCoeff=-0.0957;MQ=34.65;MQ0=287;MQRankSum=3.959;QD=3.01;ReadPosRankSum=0.141;VQSLOD=0.6908;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,1:25:11.33:123,11,0	0/1:16,0:4:2.22:14,0,2	./.	./.	0/1:23,0:13:8.80:27,0,9	0/0:18,0:10:4.09:0,4,17	0/1:32,12:29:2.63:46,0,3	./.	0/1:38,0:26:14.63:168,0,15	0/0:38,0:15:14.34:0,14,217	0/0:12,0:5:2.90:0,3,16	0/1:38,0:22:40.15:45,0,40	0/1:27,0:18:10.75:114,0,11	0/1:38,1:24:0.98:15,0,1	1/1:28,1:13:12.89:65,13,0	0/1:16,0:9:11.91:12,0,150	0/1:32,1:20:30.03:37,0,30	0/1:36,1:24:53.68:231,0,54	1/1:3,3:3:6.84:45,7,0	./.	1/1:64,0:32:47.80:383,48,0	./.	./.	1/1:44,1:33:1.07:235,1,0	1/1:29,0:17:10.50:98,11,0	1/1:23,0:8:18.01:105,18,0	1/1:10,0:3:5.79:38,6,0	0/1:18,0:4:15.24:60,0,15
chr10	102674699	.	CACAT	C	2291.93	PASS	AB=0.991;AC=33;AF=0.750;AN=44;BaseQRankSum=1.292;DP=705;FS=1.672;HRun=0;HaplotypeScore=80.7700;InbreedingCoeff=0.2281;MQ=34.73;MQ0=281;MQRankSum=5.739;QD=3.82;ReadPosRankSum=-2.613;VQSLOD=1.2002;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:23:20.95:169,21,0	0/1:17,0:5:2.61:3,0,4	./.	./.	0/0:18,0:9:5.75:0,6,32	0/0:19,0:11:1.36:0,1,3	1/1:35,5:26:14.58:127,15,0	./.	1/1:38,3:29:20.84:238,21,0	0/1:43,0:20:9.54:10,0,163	0/0:12,0:5:2.97:0,3,20	1/1:34,0:19:10.69:54,11,0	1/1:31,0:22:22.03:181,22,0	1/1:37,1:23:5.66:41,6,0	1/1:29,0:13:8.98:72,9,0	0/1:16,0:9:13.06:13,0,43	1/1:34,1:21:5.97:46,6,0	0/1:41,2:30:45.28:293,0,45	1/1:4,0:2:2.99:23,3,0	./.	1/1:65,0:34:47.79:369,48,0	./.	./.	1/1:45,0:33:48.94:367,49,0	1/1:28,0:16:8.61:131,9,0	1/1:23,0:8:19.86:127,20,0	1/1:15,0:8:17.15:102,17,0	0/1:18,0:4:36.31:58,0,36
chr10	102674701	.	CAT	C	2468.91	PASS	AB=0.979;AC=35;AF=0.795;AN=44;BaseQRankSum=0.660;DP=700;FS=2.792;HRun=0;HaplotypeScore=68.8702;InbreedingCoeff=0.1848;MQ=34.32;MQ0=283;MQRankSum=5.505;QD=4.03;ReadPosRankSum=-3.154;VQSLOD=0.9647;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:22:20.95:169,21,0	0/1:17,0:5:2.61:3,0,4	./.	./.	0/0:18,0:9:5.75:0,6,32	1/1:18,0:10:2.99:23,3,0	1/1:40,0:26:14.61:127,15,0	./.	1/1:39,0:27:21.43:242,21,0	0/1:38,5:20:10.13:10,0,154	0/0:11,0:4:2.97:0,3,20	1/1:33,0:18:10.82:74,11,0	1/1:31,0:21:31.33:205,31,0	1/1:26,12:23:5.90:65,6,0	1/1:31,0:15:8.98:72,9,0	0/1:15,0:8:13.15:13,0,43	1/1:18,15:19:5.97:46,6,0	0/1:42,0:29:43.57:310,0,44	1/1:4,0:2:2.99:23,3,0	./.	1/1:67,0:36:50.79:395,51,0	./.	./.	1/1:43,0:31:53.04:391,53,0	1/1:28,0:16:8.59:132,9,0	1/1:23,0:8:19.45:126,19,0	1/1:15,0:8:18.41:115,18,0	0/1:18,0:4:13.34:58,0,13
chr10	102674703	.	TAC	T	193.66	PASS	AB=0.894;AC=12;AF=0.333;AN=36;BaseQRankSum=2.491;DP=712;FS=2.127;HRun=0;HaplotypeScore=75.9779;InbreedingCoeff=0.3920;MQ=34.34;MQ0=286;MQRankSum=2.068;QD=0.83;ReadPosRankSum=1.856;VQSLOD=1.6315;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:17,0:5:0:0,0,0	./.	./.	./.	1/1:16,1:9:2.60:10,3,0	0/0:40,0:26:0:0,0,0	./.	1/1:37,1:26:17.27:107,17,0	0/0:44,0:21:8.51:0,9,63	./.	0/1:33,0:19:3.46:3,0,31	1/1:29,1:20:8.59:68,9,0	1/1:38,0:23:2.88:23,3,0	0/1:24,7:15:0:0,0,0	0/0:15,0:8:0.47:0,0,1	0/0:33,0:19:0.47:0,0,1	0/0:40,0:28:1.38:0,1,17	./.	./.	0/0:72,0:40:6.43:0,6,46	./.	./.	1/1:43,1:32:7.13:89,7,0	0/0:28,0:16:2.47:0,2,30	0/0:25,0:9:2.84:0,3,14	0/0:17,0:10:2.73:0,3,23	0/0:18,0:4:2.98:0,3,22
chr10	102676350	.	ACAGCAAG	A	2969.55	PASS	AB=0.987;AC=24;AF=0.429;AN=56;BaseQRankSum=-9.572;DP=574;FS=0.000;HRun=0;HaplotypeScore=221.4411;InbreedingCoeff=-0.5738;MQ=52.53;MQ0=1;MQRankSum=1.797;QD=6.23;ReadPosRankSum=-10.418;VQSLOD=-0.3240;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:36:99:116,0,528	0/1:8,0:8:0.95:1,0,337	0/1:24,0:18:55.38:55,0,279	0/1:16,0:12:98.02:98,0,135	0/1:24,0:24:6.45:6,0,831	0/1:29,0:29:41.64:42,0,1016	0/1:26,0:26:99:108,0,650	0/1:24,0:22:70.93:621,0,71	0/1:29,0:29:99:181,0,809	0/1:20,0:20:92.27:92,0,546	0/1:15,0:15:17.77:18,0,791	0/1:23,0:23:31.25:31,0,724	0/0:20,0:20:43.78:0,44,636	0/1:17,0:17:49.39:49,0,333	0/0:25,0:24:25.13:0,25,821	0/1:30,0:30:38.95:39,0,1112	0/1:19,0:19:22.60:23,0,382	0/1:12,0:12:10:10,0,209	0/1:18,0:18:99:338,0,181	0/1:11,5:16:99:413,0,207	0/1:11,0:11:16.60:277,0,17	0/1:26,0:26:62.65:63,0,932	0/0:10,0:10:24.08:0,24,456	0/1:24,0:24:15.17:15,0,380	0/1:12,0:12:51.49:51,0,268	0/0:35,0:34:11.36:0,11,995	1/1:16,0:15:10.89:481,11,0	0/0:7,0:7:12.04:0,12,218
chr10	102676351	.	C	CAACA	9840.81	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=0.622;DP=572;FS=10.071;HRun=0;HaplotypeScore=177.8974;InbreedingCoeff=0.2730;MQ=50.56;MQ0=1;MQRankSum=-7.583;QD=17.96;ReadPosRankSum=-3.411;VQSLOD=2.8742;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:35,1:36:48.12:671,48,0	0/0:8,0:8:18.47:0,18,162	0/1:24,0:18:99:162,0,139	0/1:15,0:11:58.77:72,0,59	0/1:23,0:23:16.97:17,0,401	1/1:27,1:28:63.15:1028,63,0	1/1:26,0:26:51.56:805,52,0	1/1:13,0:22:30.09:324,30,0	1/1:29,0:29:35.14:765,35,0	0/1:20,0:20:60.86:61,0,262	0/0:16,0:16:16.84:0,17,328	0/1:22,0:22:99:101,0,290	1/1:20,0:20:31.42:472,31,0	1/1:17,0:17:29.88:296,30,0	1/1:25,0:24:37.47:641,37,0	0/1:31,0:31:5.89:6,0,456	1/1:19,0:19:25.41:344,25,0	1/1:12,0:12:13.09:198,13,0	1/1:14,0:18:5.76:102,6,0	1/1:11,0:16:10.91:188,11,0	1/1:8,0:11:17.61:97,18,0	1/1:26,0:26:60.02:946,60,0	1/1:10,0:10:15.05:293,15,0	1/1:24,0:24:21.38:309,21,0	1/1:12,0:12:21.04:319,21,0	1/1:6,28:35:55.78:1158,56,0	1/1:8,0:14:29.56:180,30,0	1/1:0,7:7:12.04:288,12,0
chr10	102676352	.	AGC	A	1099.12	PASS	AB=0.899;AC=13;AF=0.232;AN=56;BaseQRankSum=-3.986;DP=554;FS=17.266;HRun=0;HaplotypeScore=181.6472;InbreedingCoeff=-0.1034;MQ=50.63;MQ0=1;MQRankSum=2.608;QD=4.97;ReadPosRankSum=-8.550;VQSLOD=-0.7643;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:35,2:36:0.13:0,0,298	0/0:8,0:8:17.42:0,17,184	0/1:23,0:18:12.41:12,0,231	0/1:16,0:11:25.85:26,0,87	0/0:22,0:22:46.89:0,47,512	0/0:27,1:28:29.84:0,30,533	0/0:22,2:24:7.15:0,7,309	0/1:16,6:20:8.69:379,0,9	0/1:26,3:29:25.82:26,0,425	0/0:20,0:20:3.61:0,4,359	0/0:16,0:16:21.96:0,22,400	0/0:22,0:22:7.20:0,7,411	0/0:20,0:20:34.11:0,34,355	0/1:14,2:16:4.98:5,0,207	0/0:26,0:25:28:0,28,388	0/0:30,0:30:64.66:0,65,699	0/0:17,1:18:5.88:0,6,196	0/1:11,0:11:9.07:9,0,101	0/1:11,4:15:99:155,0,101	0/1:13,3:16:74.30:228,0,74	0/1:7,3:10:31:108,0,31	0/0:23,2:25:0.78:0,1,424	0/0:10,0:10:23.93:0,24,219	0/0:23,0:23:16.99:0,17,210	0/1:12,0:12:18.53:19,0,127	0/0:34,0:33:53.19:0,53,530	1/1:8,5:12:32.95:280,33,0	0/0:7,0:7:11.76:0,12,72
chr10	102676358	.	CA	C	591.49	PASS	AB=0.838;AC=5;AF=0.089;AN=56;BaseQRankSum=3.167;DP=556;FS=4.342;HRun=3;HaplotypeScore=182.1402;InbreedingCoeff=-0.0678;MQ=48.16;MQ0=1;MQRankSum=-6.082;QD=6.50;ReadPosRankSum=-2.487;VQSLOD=-0.3252;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:50.01:0,50,701	0/0:10,0:10:30.09:0,30,398	0/0:24,0:17:47.14:0,47,476	0/0:16,0:11:26.97:0,27,302	0/0:22,0:22:57.07:0,57,775	0/0:26,0:26:52.68:0,53,627	0/0:23,0:23:49.66:0,50,567	0/1:17,8:23:99:312,0,179	0/0:29,0:29:55.93:0,56,614	0/0:20,0:20:54.13:0,54,714	0/0:16,0:16:48.15:0,48,663	0/0:18,0:18:51.13:0,51,675	0/0:17,0:17:37.65:0,38,444	0/0:13,0:13:30.07:0,30,382	0/0:26,0:26:54.14:0,54,634	0/0:28,0:28:84.24:0,84,1140	0/0:20,0:20:27.07:0,27,319	0/0:12,0:12:17.98:0,18,204	0/1:15,2:17:69.82:70,0,261	0/1:14,2:16:99:124,0,103	0/1:11,3:13:32.83:33,0,108	0/0:23,0:23:58.94:0,59,672	0/0:11,0:11:25.59:0,26,301	0/0:23,0:23:34.24:0,34,377	0/0:10,0:10:18.01:0,18,203	0/0:34,0:34:96.06:0,96,1086	0/1:15,4:18:10.72:170,0,11	0/0:9,0:9:14.96:0,15,132
chr10	102676370	.	C	CAAACA	11290.50	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=-0.082;DP=556;FS=10.626;HRun=0;HaplotypeScore=163.4062;InbreedingCoeff=0.7907;MQ=52.65;MQ0=0;MQRankSum=-10.371;QD=27.21;ReadPosRankSum=-0.474;VQSLOD=4.0772;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,21:32:40.42:958,40,0	0/0:9,0:9:24.92:0,25,321	0/0:18,0:13:5.63:0,6,160	0/0:13,0:9:22.43:0,22,198	0/0:21,0:21:56.33:0,56,883	1/1:3,23:28:48.16:1320,48,0	1/1:2,17:21:39.13:1075,39,0	1/1:23,0:21:14.20:217,14,0	1/1:3,20:30:42.31:1145,42,0	0/0:16,0:16:44.29:0,44,735	0/0:17,0:17:44.14:0,44,714	0/0:19,0:19:55:0,55,786	1/1:3,14:18:21.17:625,21,0	1/1:8,1:11:20.97:328,21,0	1/1:2,20:24:33.07:981,33,0	0/0:28,0:28:65.02:0,65,1080	1/1:0,19:22:17.90:457,18,0	1/1:2,9:13:12.04:319,12,0	1/1:7,0:19:29.62:163,30,0	1/1:16,0:16:14.03:251,14,0	1/1:15,0:14:12.20:73,12,0	1/1:1,20:25:56.18:1328,56,0	1/1:5,8:15:15.48:428,15,0	1/1:3,17:22:15.05:335,15,0	1/1:2,10:13:12.04:339,12,0	0/1:35,0:35:57.70:640,0,58	1/1:21,0:20:28.15:144,28,0	0/1:10,0:10:35.85:165,0,36
chr10	102676494	.	AC	A	4768.04	PASS	AB=0.955;AC=27;AF=0.482;AN=56;BaseQRankSum=0.759;DP=471;FS=6.321;HRun=9;HaplotypeScore=62.4990;InbreedingCoeff=0.9176;MQ=76.00;MQ0=2;MQRankSum=-2.813;QD=18.85;ReadPosRankSum=4.697;VQSLOD=5.1681;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,23:28:62.99:568,63,0	0/0:9,0:9:27.08:0,27,311	0/1:19,1:19:1.23:1,0,266	0/0:22,0:23:30.21:0,30,394	0/0:19,0:19:54.14:0,54,612	1/1:3,14:17:36.02:329,36,0	1/1:2,15:17:41.97:376,42,0	0/0:12,0:19:20.34:0,20,118	1/1:3,21:24:57.03:521,57,0	0/0:16,0:16:42.09:0,42,465	0/0:17,0:17:45.12:0,45,509	0/0:22,2:24:17.35:0,17,689	1/1:3,12:15:33.02:301,33,0	1/1:2,4:6:12:110,12,0	1/1:2,20:22:53.88:469,54,0	0/0:13,0:13:39.12:0,39,450	1/1:6,27:33:72.03:659,72,0	1/1:0,10:11:29.05:253,29,0	0/0:2,0:14:34.53:0,35,194	0/0:2,0:8:14.32:0,14,77	0/0:8,0:15:17.11:0,17,86	1/1:0,15:15:38.98:349,39,0	1/1:2,15:17:32.96:292,33,0	1/1:1,12:13:30.01:274,30,0	1/1:1,13:14:1.40:267,1,0	0/0:5,0:12:25.89:0,26,159	0/0:3,0:14:25.71:0,26,138	0/0:0,0:13:22.76:0,23,116
chr10	102676701	.	T	TAAAATA	7592.61	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-3.679;DP=424;FS=1.552;HRun=0;HaplotypeScore=93.0811;InbreedingCoeff=0.8646;MQ=70.10;MQ0=0;MQRankSum=-11.102;QD=41.72;ReadPosRankSum=-0.472;VQSLOD=4.5636;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,11:26:41.71:1205,42,0	0/0:12,0:12:33.10:0,33,652	0/0:19,0:17:10.33:0,10,137	0/1:16,0:14:5.71:6,0,219	0/0:15,0:15:27.07:0,27,497	1/1:2,4:6:12.04:394,12,0	1/1:2,2:8:9.03:251,9,0	0/0:35,0:35:72.24:0,72,1335	1/1:5,1:7:9.02:164,9,0	0/0:19,0:19:39.13:0,39,729	0/0:16,0:16:36.12:0,36,718	0/0:17,0:17:45.15:0,45,935	1/1:4,9:18:42.14:1178,42,0	1/1:6,2:9:9.03:239,9,0	1/1:5,5:10:21.07:687,21,0	0/0:13,0:13:27.07:0,27,526	1/1:15,4:21:36.02:732,36,0	1/1:13,10:28:45.07:1151,45,0	0/0:12,0:12:24.08:0,24,422	0/0:14,0:14:21.05:0,21,372	0/0:14,0:14:39.13:0,39,807	1/1:5,0:6:3.01:40,3,0	1/1:3,3:7:12.04:337,12,0	1/1:1,2:3:6.02:197,6,0	1/1:6,9:16:33.09:1011,33,0	0/0:20,0:20:45.13:0,45,873	0/0:27,0:27:45.12:0,45,834	0/0:9,0:9:27.07:0,27,523
chr10	102676779	.	T	TTC	11268.60	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-11.969;DP=565;FS=8.329;HRun=0;HaplotypeScore=69.3547;InbreedingCoeff=0.9948;MQ=85.33;MQ0=0;MQRankSum=-1.578;QD=43.85;ReadPosRankSum=3.532;VQSLOD=6.4796;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,39:41:99:1910,114,0	0/0:14,0:14:39.13:0,39,507	0/0:20,0:20:19.71:0,20,443	0/0:19,0:20:31.87:0,32,382	0/0:18,0:18:48.16:0,48,624	1/1:1,7:8:21.07:357,21,0	1/1:3,17:20:18.17:867,18,0	0/0:25,0:25:57.17:0,57,714	1/1:0,16:16:45.15:765,45,0	0/0:22,0:22:57.18:0,57,729	0/0:17,0:17:48.15:0,48,611	0/0:19,0:19:45.14:0,45,572	1/1:4,15:19:48.16:799,48,0	1/1:3,6:10:21.07:355,21,0	1/1:0,12:12:33.11:561,33,0	0/0:16,0:16:45.15:0,45,584	1/1:3,21:23:54.18:913,54,0	1/1:1,28:30:78.27:1326,78,0	0/0:17,0:17:42.13:0,42,535	0/0:18,0:18:45.15:0,45,585	0/0:34,0:34:81.26:0,81,1053	1/1:0,16:16:48.16:817,48,0	1/1:1,13:14:39.13:646,39,0	1/1:1,23:25:66.23:1123,66,0	1/1:3,18:22:15.16:829,15,0	0/0:28,0:28:75.24:0,75,964	0/0:18,0:18:51.17:0,51,663	0/0:22,0:22:66.20:0,66,843
chr10	102677582	.	C	CCA	2040.57	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=4.074;DP=626;FS=7.948;HRun=0;HaplotypeScore=172.3705;InbreedingCoeff=0.8548;MQ=63.34;MQ0=2;MQRankSum=-5.529;QD=6.48;ReadPosRankSum=-0.303;VQSLOD=2.3820;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:19:0:0,0,0	0/0:10,0:10:21.06:0,21,255	0/0:22,0:22:38.94:0,39,432	0/0:30,0:27:23.97:0,24,446	0/0:19,0:19:39.07:0,39,437	1/1:12,0:11:8.98:72,9,0	1/1:36,0:36:26.85:259,27,0	0/0:24,0:24:45.14:0,45,546	1/1:24,0:23:11.98:99,12,0	0/0:27,0:27:63.13:0,63,736	0/0:15,0:15:33.07:0,33,376	0/0:23,0:23:42.08:0,42,492	1/1:17,0:17:14.99:128,15,0	1/1:30,0:30:9:79,9,0	1/1:20,0:18:8.61:97,9,0	0/0:26,0:27:57:0,57,669	1/1:33,0:33:20.97:191,21,0	1/1:20,0:19:20.79:168,21,0	0/0:13,0:13:27.07:0,27,317	0/0:16,0:16:36.11:0,36,437	0/0:61,0:61:99:0,132,1577	0/1:14,0:13:0:0,0,0	1/1:13,0:13:2.98:22,3,0	0/1:30,0:30:0:0,0,0	1/1:14,0:13:5.77:27,6,0	1/1:5,16:21:42.14:667,42,0	0/0:21,0:22:41.93:0,42,487	1/1:2,8:11:27.09:435,27,0
chr10	102678017	.	C	CACACAT	6122.95	PASS	AB=0.946;AC=17;AF=0.304;AN=56;BaseQRankSum=9.316;DP=953;FS=0.000;HRun=0;HaplotypeScore=371.3225;InbreedingCoeff=-0.1707;MQ=47.59;MQ0=16;MQRankSum=-6.928;QD=11.98;ReadPosRankSum=1.361;VQSLOD=2.6690;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,3:37:31.43:177,0,31	0/0:15,0:15:44.64:0,45,972	0/0:24,0:12:29.69:0,30,401	0/0:53,0:20:31.95:0,32,401	0/0:30,0:30:77:0,77,1522	0/1:27,4:31:24.28:357,0,24	0/1:53,0:53:70.24:314,0,70	0/0:42,0:40:70.11:0,70,1661	0/1:52,6:57:56.26:1067,0,56	0/0:36,0:35:94.20:0,94,1648	0/0:15,0:15:45.08:0,45,830	0/0:35,0:35:90.11:0,90,1971	1/1:29,4:33:0.30:998,0,0	0/1:40,4:45:34.79:499,0,35	0/1:39,3:42:61.10:339,0,61	0/0:23,0:22:60.15:0,60,1225	0/1:29,1:30:39.39:673,0,39	0/1:17,1:18:86.80:284,0,87	0/0:27,0:19:48.16:0,48,939	0/0:29,0:29:73.77:0,74,1509	0/0:90,0:88:99:0,218,4198	0/1:32,2:33:52.42:108,0,52	1/1:13,1:14:9:97,9,0	0/1:40,2:42:33.64:180,0,34	0/1:18,0:18:27.35:148,0,27	0/1:37,0:35:99:518,0,244	0/0:23,0:23:69.15:0,69,1401	0/1:18,0:19:24.99:364,0,25
chr10	102678019	.	C	CACAT	5088.06	PASS	AB=0.932;AC=16;AF=0.286;AN=56;BaseQRankSum=9.200;DP=956;FS=0.370;HRun=0;HaplotypeScore=350.7831;InbreedingCoeff=-0.2389;MQ=48.18;MQ0=17;MQRankSum=-6.534;QD=9.92;ReadPosRankSum=0.855;VQSLOD=2.7327;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,5:36:72.96:132,0,73	0/0:16,0:16:43.84:0,44,814	0/0:25,0:13:26.24:0,26,385	0/0:55,0:20:35.81:0,36,411	0/0:31,0:31:83.21:0,83,1339	0/1:29,1:30:26.03:242,0,26	0/1:46,7:53:86.40:302,0,86	0/0:40,0:38:99:0,101,1518	0/1:50,9:58:73.05:998,0,73	0/0:35,0:34:56.17:0,56,1379	0/0:15,0:15:45.09:0,45,694	0/0:34,0:34:95.85:0,96,1683	0/1:31,2:33:58.31:839,0,58	0/1:41,4:45:67.42:380,0,67	0/1:36,6:42:85.03:304,0,85	0/0:22,0:21:60.13:0,60,1030	0/1:31,2:33:29.62:581,0,30	0/1:16,2:18:99:217,0,130	0/0:26,0:18:48.15:0,48,814	0/0:28,0:28:75.22:0,75,1298	0/0:91,0:89:99:0,233,3707	0/1:31,4:34:52.79:109,0,53	1/1:13,1:14:9.02:132,9,0	0/1:40,1:41:35.01:180,0,35	0/1:18,0:18:54.98:124,0,55	0/1:38,0:36:99:320,0,343	0/0:24,0:24:72.14:0,72,1195	0/1:18,0:18:23.49:228,0,23
chr10	102678021	.	C	CAT	3529.75	PASS	AB=0.927;AC=16;AF=0.286;AN=56;BaseQRankSum=7.653;DP=961;FS=0.819;HRun=0;HaplotypeScore=334.7569;InbreedingCoeff=-0.2387;MQ=47.53;MQ0=17;MQRankSum=-3.728;QD=6.84;ReadPosRankSum=-1.097;VQSLOD=2.3576;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:35,4:39:75.23:75,0,90	0/0:16,0:16:25.19:0,25,637	0/0:28,0:14:32.88:0,33,364	0/0:54,0:20:31.69:0,32,414	0/0:31,0:31:81.18:0,81,1114	0/1:28,1:30:47.71:225,0,48	0/1:44,7:51:99:285,0,123	0/0:40,0:38:99:0,111,1365	0/1:51,8:58:99:643,0,103	0/0:36,0:35:92.24:0,92,1228	0/0:15,0:15:45.05:0,45,569	0/0:33,0:33:96.26:0,96,1368	0/1:29,4:33:53.24:593,0,53	0/1:43,3:46:66.84:297,0,67	0/1:38,4:42:99:259,0,101	0/0:23,0:22:63.15:0,63,872	0/1:30,4:34:90.39:464,0,90	0/1:18,0:18:99:133,0,181	0/0:25,0:18:48.11:0,48,668	0/0:28,0:28:75.19:0,75,1064	0/0:90,0:88:99:0,238,3104	0/1:35,0:34:51.93:109,0,52	1/1:12,1:13:9.02:130,9,0	0/1:34,6:40:50.54:152,0,51	0/1:16,3:19:57.37:116,0,57	0/1:38,0:36:14.55:15,0,443	0/0:25,0:25:72.08:0,72,976	0/1:19,0:19:32.57:33,0,49
chr10	102678024	.	ACACT	A	2247.88	PASS	AB=0.901;AC=19;AF=0.339;AN=56;BaseQRankSum=16.213;DP=972;FS=0.338;HRun=0;HaplotypeScore=367.8330;InbreedingCoeff=0.2590;MQ=48.14;MQ0=15;MQRankSum=-6.345;QD=4.50;ReadPosRankSum=-3.308;VQSLOD=0.5600;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,5:39:25.45:191,25,0	0/0:16,0:16:48.15:0,48,1167	0/0:30,0:16:31.03:0,31,497	0/0:57,0:21:37.40:0,37,590	0/0:29,0:29:84.12:0,84,1922	1/1:25,1:29:13.98:124,14,0	0/1:44,5:49:67.37:173,0,67	0/0:43,0:41:99:0,122,2195	1/1:50,2:56:7.53:291,8,0	0/0:39,0:39:99:0,114,2193	0/0:15,0:15:44.86:0,45,962	0/0:34,0:34:99:0,99,2341	0/1:28,0:31:18.06:156,0,18	0/1:38,5:47:8.66:204,0,9	1/1:34,6:43:7.89:200,8,0	0/0:24,0:23:66.16:0,66,1503	0/1:30,5:35:26.06:259,0,26	0/1:17,3:20:14.51:186,0,15	0/0:26,0:19:52.30:0,52,1074	0/0:28,0:28:77.20:0,77,1774	0/0:95,0:93:99:0,220,5097	0/1:26,5:33:12.18:57,0,12	0/0:8,4:12:5.94:0,6,42	1/1:35,3:42:17.62:127,18,0	0/1:19,0:19:32.77:60,0,33	0/1:36,2:36:99:239,0,186	0/0:24,0:24:72.21:0,72,1738	0/1:16,1:17:40.55:167,0,41
chr10	102678026	.	ACTCTCT	A	3999.40	PASS	AB=0.953;AC=16;AF=0.286;AN=56;BaseQRankSum=9.653;DP=980;FS=2.343;HRun=0;HaplotypeScore=391.1615;InbreedingCoeff=-0.2526;MQ=48.27;MQ0=13;MQRankSum=-4.919;QD=7.77;ReadPosRankSum=-0.347;VQSLOD=0.7800;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:40:77.01:77,0,233	0/0:16,0:16:48.16:0,48,1536	0/0:30,0:17:47.78:0,48,1050	0/0:58,0:22:53.24:0,53,1192	0/0:28,0:28:77.60:0,78,2648	0/1:29,0:29:99:139,0,151	0/1:49,0:49:99:116,0,309	0/0:42,0:41:99:0,120,3688	0/1:57,0:56:99:571,0,266	0/0:39,0:39:99:0,117,3676	0/0:15,0:15:45.15:0,45,1433	0/0:35,0:35:99:0,102,3350	0/1:30,0:30:99:446,0,274	0/1:47,0:47:99:237,0,380	0/1:43,0:43:99:197,0,188	0/0:24,0:23:66.22:0,66,2179	0/1:35,0:36:99:302,0,242	0/1:20,0:20:64.97:65,0,379	0/0:29,0:23:68.57:0,69,1917	0/0:27,0:27:71.27:0,71,2270	0/0:95,2:95:99:0,221,7892	0/1:32,1:32:33.74:34,0,89	1/1:12,0:12:5.90:40,6,0	0/1:42,0:42:87.94:88,0,173	0/1:21,0:21:32.15:32,0,168	0/1:22,17:37:99:1049,0,760	0/0:24,0:24:72.25:0,72,2493	0/1:10,7:17:99:606,0,136
chr10	102678028	.	T	TCACACACACA	9259.21	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=18.870;DP=958;FS=4.093;HRun=0;HaplotypeScore=423.3535;InbreedingCoeff=0.9013;MQ=47.79;MQ0=13;MQRankSum=-8.526;QD=18.86;ReadPosRankSum=-3.723;VQSLOD=1.7231;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,2:41:35.84:376,36,0	0/0:16,0:16:48.13:0,48,1197	0/0:31,0:17:35.34:0,35,554	0/0:57,0:22:26.10:0,26,579	0/0:28,0:28:77.96:0,78,1956	1/1:23,4:27:30.36:360,30,0	1/1:45,0:45:12.40:405,12,0	0/0:43,0:42:99:0,126,2238	1/1:49,6:54:73.17:1164,73,0	0/0:39,0:39:99:0,116,2564	0/0:16,0:16:47.72:0,48,1066	0/0:35,0:35:99:0,102,2647	1/1:28,4:32:69.20:1206,69,0	1/1:38,5:43:55.92:959,56,0	1/1:38,3:41:31.48:350,31,0	0/0:24,0:23:66.65:0,67,1693	1/1:30,1:31:45.15:796,45,0	1/1:19,1:20:46.95:811,47,0	0/0:29,0:23:64.43:0,64,1338	0/0:26,0:26:68.13:0,68,1761	0/0:99,0:97:99:0,227,5657	1/1:30,2:31:11.82:149,12,0	1/1:9,1:10:3.01:49,3,0	1/1:38,2:40:28.03:270,28,0	1/1:19,0:19:22.91:272,23,0	0/1:38,0:36:10.65:1334,0,11	0/0:24,0:24:72.21:0,72,1882	1/1:16,1:17:38.35:758,38,0
chr10	102678065	.	T	TAC	16324	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=4.065;DP=1094;FS=0.265;HRun=0;HaplotypeScore=275.9052;InbreedingCoeff=0.9998;MQ=52.78;MQ0=10;MQRankSum=-5.613;QD=29.52;ReadPosRankSum=3.043;VQSLOD=4.9252;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,30:39:59.53:1027,60,0	0/0:13,0:13:27.09:0,27,350	0/0:45,0:24:51.38:0,51,646	0/0:54,0:31:57.79:0,58,641	0/0:32,0:32:84.27:0,84,1096	1/1:6,20:26:50.77:873,51,0	1/1:5,46:52:84.29:1434,84,0	0/0:46,0:44:99:0,108,1333	1/1:10,40:50:89.63:1528,90,0	0/0:54,0:54:99:0,133,1838	0/0:18,0:18:45.13:0,45,575	0/0:45,0:45:99:0,120,1455	1/1:6,24:33:53.99:856,54,0	1/1:8,37:46:83.86:1369,84,0	1/1:9,34:42:77.45:1333,77,0	0/0:39,0:39:90.05:0,90,1300	1/1:6,35:42:71.22:1330,71,0	1/1:5,25:30:32.98:918,33,0	0/0:35,0:34:77.19:0,77,950	0/0:31,0:31:72.21:0,72,944	0/0:105,0:105:99:0,260,3313	1/1:8,26:34:56.77:973,57,0	1/1:0,20:21:42.14:718,42,0	1/1:10,35:45:54.13:898,54,0	1/1:4,23:27:50.69:873,51,0	1/1:12,31:42:75.28:1474,75,0	0/0:23,0:23:54.15:0,54,668	1/1:6,15:21:42.60:720,43,0
chr10	102678268	.	A	ACT	11723.35	PASS	AB=0.750;AC=29;AF=0.518;AN=56;BaseQRankSum=-2.313;DP=1013;FS=33.452;HRun=0;HaplotypeScore=213.6133;InbreedingCoeff=0.9228;MQ=50.36;MQ0=38;MQRankSum=0.301;QD=24.17;ReadPosRankSum=7.303;VQSLOD=3.8392;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,29:39:41.08:883,41,0	0/0:13,0:13:39.08:0,39,481	0/0:42,0:8:21.06:0,21,264	0/0:42,0:16:26.88:0,27,357	0/0:29,0:29:78.21:0,78,984	1/1:3,18:20:24.07:415,24,0	1/1:12,46:58:19.55:959,20,0	0/0:48,0:45:99:0,117,1441	1/1:10,30:40:54.17:931,54,0	0/0:48,0:48:99:0,114,1459	0/0:21,0:21:57.13:0,57,710	0/0:45,0:45:99:0,114,1453	1/1:10,22:29:77.87:1130,78,0	1/1:3,25:28:50.96:880,51,0	1/1:20,23:42:42.12:685,42,0	0/0:41,2:43:13.94:0,14,1257	1/1:8,19:26:55.53:868,56,0	1/1:7,23:30:60.12:973,60,0	0/0:27,0:20:42.11:0,42,528	0/0:20,0:20:48.01:0,48,592	0/0:119,0:119:99:0,293,3689	1/1:5,26:30:41.79:726,42,0	1/1:0,16:16:39.13:673,39,0	1/1:12,30:39:56.80:954,57,0	1/1:3,26:29:33.11:570,33,0	0/1:22,11:32:41.02:800,0,41	0/0:31,0:31:72.17:0,72,907	1/1:4,7:10:18.01:277,18,0
chr10	102678322	.	ACACACT	A	12854.52	PASS	AB=0.639;AC=28;AF=0.500;AN=56;BaseQRankSum=18.743;DP=856;FS=32.773;HRun=0;HaplotypeScore=269.4685;InbreedingCoeff=0.8376;MQ=54.52;MQ0=14;MQRankSum=-13.919;QD=37.59;ReadPosRankSum=-0.575;VQSLOD=3.3467;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,8:24:33.05:616,33,0	0/0:14,0:14:36.12:0,36,1251	0/0:46,0:14:33.11:0,33,1035	0/0:45,0:23:47.62:0,48,1010	0/0:29,0:29:81.28:0,81,2634	1/1:5,11:16:35.96:738,36,0	1/1:15,15:30:32.65:750,33,0	0/0:37,0:36:87.23:0,87,2150	1/1:7,17:24:60.07:1169,60,0	0/0:44,0:44:99:0,123,3881	0/0:17,0:17:45.14:0,45,1442	0/0:53,0:53:99:0,150,4639	1/1:5,27:32:90.29:1927,90,0	1/1:7,11:18:30.10:634,30,0	1/1:9,27:36:63.41:1304,63,0	0/0:49,1:50:75.42:0,75,4245	0/1:11,8:19:28.29:569,0,28	1/1:14,8:22:5.43:753,5,0	0/0:15,0:14:36.11:0,36,1068	0/0:19,0:19:57.18:0,57,1774	0/0:118,0:117:99:0,295,9258	1/1:10,19:29:39.09:752,39,0	1/1:5,4:9:18.03:302,18,0	1/1:13,8:21:20.97:361,21,0	1/1:7,17:23:49.22:1139,49,0	0/1:8,23:31:22.73:1566,0,23	0/0:27,0:27:69.23:0,69,2282	1/1:3,3:6:15.02:273,15,0
chr10	102678324	.	ACACT	A	5910.11	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=19.654;DP=852;FS=35.241;HRun=0;HaplotypeScore=268.1488;InbreedingCoeff=0.9301;MQ=54.43;MQ0=15;MQRankSum=-13.978;QD=17.64;ReadPosRankSum=-0.715;VQSLOD=3.1837;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,3:23:31.84:293,32,0	0/0:13,0:13:36.12:0,36,960	0/0:49,0:16:28.07:0,28,812	0/0:43,0:23:47.24:0,47,869	0/0:28,0:28:81.25:0,81,2002	1/1:14,2:16:35.79:339,36,0	1/1:29,1:30:33.27:338,33,0	0/0:36,0:35:90.10:0,90,1741	1/1:22,2:24:59.26:569,59,0	0/0:43,0:43:99:0,123,3028	0/0:16,0:16:45.14:0,45,1126	0/0:54,0:54:99:0,150,3672	1/1:30,2:32:89.29:870,89,0	1/1:17,1:18:29.99:294,30,0	1/1:32,4:36:65.99:647,66,0	0/0:49,0:49:99:0,113,3317	1/1:17,2:19:4.51:250,5,0	1/1:20,1:21:27.19:317,27,0	0/0:16,0:15:36.11:0,36,835	0/0:20,0:20:60.18:0,60,1413	0/0:120,0:119:99:0,294,7257	1/1:28,1:29:38.48:358,38,0	1/1:8,1:9:18:166,18,0	1/1:14,3:17:20.93:188,21,0	1/1:23,0:22:26.33:516,26,0	0/1:31,0:31:2.66:642,0,3	0/0:29,0:29:75.22:0,75,1824	1/1:6,0:6:14.49:124,14,0
chr10	102678372	.	A	ACTCT	5951.16	PASS	AB=0.558;AC=24;AF=0.444;AN=54;BaseQRankSum=11.214;DP=812;FS=5.150;HRun=0;HaplotypeScore=287.8026;InbreedingCoeff=0.8633;MQ=51.33;MQ0=3;MQRankSum=-13.238;QD=18.42;ReadPosRankSum=-0.483;VQSLOD=3.8247;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:3,12:15:0.12:0,0,0	0/0:11,0:11:30.10:0,30,540	0/0:51,0:31:15.22:0,15,852	0/0:50,0:35:68.46:0,68,1128	0/0:25,0:25:75.26:0,75,1300	1/1:6,8:14:12.04:277,12,0	1/1:13,19:32:14.45:392,14,0	0/0:38,0:38:96.26:0,96,1610	1/1:11,24:35:15.45:394,15,0	0/0:44,0:44:99:0,120,2076	0/0:12,0:12:33.11:0,33,588	0/0:40,0:40:99:0,114,2066	1/1:14,35:49:72:1686,72,0	1/1:14,15:29:18.99:321,19,0	1/1:8,32:41:17.82:332,18,0	0/0:42,2:44:99:0,111,1977	1/1:5,8:13:27.48:611,27,0	1/1:6,6:12:7.65:490,8,0	0/0:22,0:22:63.18:0,63,1046	0/0:17,0:17:41.88:0,42,742	0/0:81,0:81:99:0,199,3538	1/1:10,24:34:2.18:77,2,0	0/1:3,11:14:0:0,0,0	0/0:3,11:14:0.89:0,1,3	./.	1/1:27,1:28:11.01:1064,11,0	0/0:21,0:21:57.20:0,57,1042	1/1:7,0:7:17.93:307,18,0
chr10	102678376	.	T	TCTCTCA	5382.24	PASS	AB=0.886;AC=23;AF=0.411;AN=56;BaseQRankSum=11.560;DP=808;FS=2.379;HRun=0;HaplotypeScore=305.7357;InbreedingCoeff=0.7785;MQ=52.28;MQ0=5;MQRankSum=-13.422;QD=17.31;ReadPosRankSum=-0.219;VQSLOD=3.7129;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:0.12:0,0,0	0/0:11,0:11:30.10:0,30,706	0/0:48,0:27:15.21:0,15,1106	0/0:56,0:38:71.58:0,72,1501	0/0:28,0:28:81.25:0,81,1723	1/1:14,0:14:12.04:182,12,0	1/1:32,0:33:14.49:221,14,0	0/0:41,0:41:99:0,102,2037	1/1:33,0:33:17.92:274,18,0	0/0:44,0:44:99:0,132,2836	0/0:12,0:12:33.11:0,33,758	0/0:41,0:41:99:0,99,2715	1/1:48,0:48:77.78:1185,78,0	1/1:29,0:29:19.07:225,19,0	1/1:40,0:40:2.25:203,2,0	0/0:43,0:43:99:0,114,2628	1/1:12,0:12:26.72:411,27,0	1/1:10,0:10:16.77:345,17,0	0/0:25,0:25:75.16:0,75,1453	0/0:16,0:16:42.10:0,42,983	0/0:79,0:79:99:0,199,4576	1/1:32,0:32:2.64:58,3,0	0/1:13,0:13:0:0,0,0	0/0:15,0:15:0.70:0,1,2	0/0:17,0:17:2.90:0,3,17	0/1:12,13:25:4.60:1764,0,5	0/0:20,0:20:57.20:0,57,1400	1/1:3,4:7:18.06:513,18,0
chr10	102678411	.	C	CGCACACACACACAT	3138.28	PASS	AB=0.868;AC=15;AF=0.268;AN=56;BaseQRankSum=6.948;DP=629;FS=2.744;HRun=0;HaplotypeScore=236.2608;InbreedingCoeff=0.4049;MQ=55.78;MQ0=14;MQRankSum=-6.703;QD=22.42;ReadPosRankSum=3.566;VQSLOD=2.4473;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:8:0.02:0,0,0	0/0:9,0:9:24.04:0,24,743	0/0:43,0:16:42.09:0,42,1018	0/0:66,0:33:71.26:0,71,1903	0/0:28,0:28:72.20:0,72,2526	0/0:6,0:6:2.32:0,2,11	0/0:22,1:22:2.08:0,2,16	0/0:33,0:32:91.08:0,91,3241	0/1:18,4:22:35.50:414,0,35	0/0:40,0:40:99:0,104,4348	0/0:12,0:11:30.07:0,30,986	0/0:38,0:37:45.95:0,46,3190	1/1:9,3:14:18.06:1030,18,0	1/1:12,5:17:3.33:215,3,0	0/1:17,5:22:5.97:84,0,6	0/0:37,0:37:89.16:0,89,3326	1/1:5,2:7:9.50:545,10,0	0/1:4,0:4:59.34:128,0,59	0/0:24,0:23:66.22:0,66,2457	0/0:24,0:24:35.82:0,36,1262	0/0:70,0:68:99:0,159,5141	0/1:9,4:12:0.29:0,0,1	0/1:7,5:12:0.05:0,0,0	0/0:7,0:7:1.55:0,2,4	0/0:9,0:9:0.89:0,1,2	0/1:16,1:16:99:760,0,332	0/0:20,0:20:50.73:0,51,1856	1/1:3,0:3:3.01:109,3,0
chr10	102678426	.	TCA	T	579.46	PASS	AB=0.959;AC=15;AF=0.288;AN=52;BaseQRankSum=2.021;DP=637;FS=5.982;HRun=0;HaplotypeScore=156.4290;InbreedingCoeff=0.3247;MQ=51.71;MQ0=16;MQRankSum=3.212;QD=2.15;ReadPosRankSum=-0.850;VQSLOD=2.0895;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:9:0:0,0,0	0/1:9,0:10:35.89:36,0,77	./.	./.	0/0:27,0:27:5.18:0,5,273	0/0:8,0:8:3:0,3,35	0/1:33,0:31:0.14:1,0,0	0/1:35,0:34:0.91:14,0,1	0/0:24,0:25:3.99:0,4,14	0/1:34,5:39:60.58:61,0,353	0/1:16,0:15:48.72:49,0,104	0/0:35,0:34:24.20:0,24,648	0/0:18,0:18:5.94:0,6,43	0/0:23,0:23:2.97:0,3,25	0/0:25,0:25:3.01:0,3,33	0/0:39,1:40:20.92:0,21,502	0/0:9,0:9:5.72:0,6,33	0/0:5,0:5:8.96:0,9,99	1/1:18,0:17:8.95:69,9,0	1/1:9,15:24:6.89:68,7,0	1/1:49,3:51:5.41:166,5,0	1/1:18,0:17:0.47:1,0,0	0/0:18,0:18:5.81:0,6,49	0/0:10,0:10:0:0,0,0	0/0:12,0:12:5.74:0,6,38	0/0:25,0:24:29.95:0,30,188	1/1:20,3:23:29.89:256,30,0	0/0:6,0:6:5.99:0,6,48
chr10	102679171	.	A	ACT	21433.36	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-14.385;DP=653;FS=21.723;HRun=0;HaplotypeScore=66.2670;InbreedingCoeff=0.9898;MQ=92.24;MQ0=0;MQRankSum=-5.808;QD=42.61;ReadPosRankSum=3.308;VQSLOD=4.2326;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,45:50:99:2201,126,0	0/0:13,0:13:33.11:0,33,446	0/0:23,0:23:57.36:0,57,784	0/0:31,0:31:72.18:0,72,912	0/0:13,0:13:33.11:0,33,446	1/1:0,19:19:51.17:894,51,0	1/1:5,32:39:76.08:1364,76,0	1/1:3,22:25:63.20:1077,63,0	1/1:2,26:28:63.22:1102,63,0	0/0:19,0:19:45.15:0,45,609	0/0:10,0:10:27.09:0,27,365	0/0:20,0:20:60.19:0,60,797	1/1:3,13:16:36.12:628,36,0	1/1:2,26:30:72.25:1262,72,0	1/1:1,20:21:51.17:894,51,0	0/0:21,0:21:57.19:0,57,771	1/1:1,23:26:63.03:1100,63,0	1/1:4,28:32:63.21:1105,63,0	1/1:4,17:22:54.19:946,54,0	1/1:3,11:14:27.09:473,27,0	1/1:2,43:45:99:2050,117,0	1/1:3,17:20:51.17:893,51,0	1/1:0,11:11:33.11:578,33,0	1/1:1,37:38:99:1735,99,0	1/1:1,18:20:57.20:989,57,0	1/1:1,16:17:10.56:774,11,0	1/1:2,20:23:63.22:1103,63,0	1/1:0,7:7:15.05:263,15,0
chr10	102679999	.	A	AC	12246.60	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-12.168;DP=580;FS=7.518;HRun=3;HaplotypeScore=59.5203;InbreedingCoeff=0.9973;MQ=84.33;MQ0=0;MQRankSum=-2.952;QD=35.29;ReadPosRankSum=5.077;VQSLOD=5.1215;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,36:40:99:1428,102,0	0/0:7,0:7:21.06:0,21,251	0/0:18,0:18:51.13:0,51,598	0/0:19,0:19:53.82:0,54,604	0/0:15,0:15:42.13:0,42,502	1/1:0,14:14:30.10:420,30,0	1/1:0,27:27:75.25:1050,75,0	0/0:23,0:23:60.16:0,60,701	1/1:0,19:19:51.17:714,51,0	0/0:26,0:26:72.22:0,72,864	0/0:9,0:9:24.06:0,24,277	0/0:26,0:26:78.23:0,78,924	1/1:0,11:11:30.10:420,30,0	1/1:2,19:21:57.19:797,57,0	1/1:3,16:19:38.92:545,39,0	0/0:20,1:21:21.34:0,21,675	1/1:1,35:36:96.32:1344,96,0	1/1:1,29:30:84.28:1176,84,0	0/0:23,0:23:63.18:0,63,743	0/0:11,0:11:24.07:0,24,287	0/0:21,0:21:57.17:0,57,684	1/1:2,19:21:51.17:713,51,0	1/1:0,17:17:33.08:461,33,0	1/1:1,40:41:99:1596,114,0	1/1:2,17:19:38.97:545,39,0	1/1:1,18:19:21.16:701,21,0	0/0:14,0:14:42.11:0,42,491	1/1:4,9:13:24.08:336,24,0
chr10	102680221	.	AAGGAG	A	13294.17	PASS	AB=0.734;AC=30;AF=0.536;AN=56;BaseQRankSum=11.299;DP=496;FS=1.994;HRun=0;HaplotypeScore=107.0950;InbreedingCoeff=0.8310;MQ=91.02;MQ0=2;MQRankSum=-7.009;QD=49.06;ReadPosRankSum=4.869;VQSLOD=5.1210;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:69.24:1560,69,0	0/0:14,0:14:42.14:0,42,1290	0/0:18,0:18:0.38:0,0,1417	0/0:31,0:31:85.70:0,86,2229	0/0:6,0:6:18.06:0,18,541	1/1:1,10:10:18.06:419,18,0	1/1:0,25:25:53.74:1254,54,0	0/0:23,0:23:69.24:0,69,2183	1/1:0,15:15:45.15:1048,45,0	0/0:18,0:18:54.19:0,54,1793	0/0:7,0:7:21.07:0,21,637	0/0:14,0:14:42.14:0,42,1397	1/1:0,10:10:27.09:615,27,0	1/1:0,14:14:33.11:768,33,0	1/1:0,13:13:36.12:826,36,0	0/1:20,1:21:6.59:7,0,1929	1/1:0,20:20:45.15:1048,45,0	1/1:0,16:16:39.13:909,39,0	0/0:17,0:17:51.17:0,51,1633	0/0:15,0:15:45.15:0,45,1439	0/0:47,0:47:99:0,138,4471	1/1:0,15:15:36.12:823,36,0	1/1:0,12:12:21.07:480,21,0	1/1:1,22:22:41.88:972,42,0	1/1:0,20:20:45.15:983,45,0	0/1:1,17:18:48.83:957,0,49	0/0:15,0:14:45.15:0,45,1481	1/1:0,9:9:27.09:626,27,0
chr10	102681649	.	ATGCCCGC	A	1075.68	PASS	AB=0.746;AC=14;AF=0.269;AN=52;BaseQRankSum=1.285;DP=308;FS=26.707;HRun=0;HaplotypeScore=68.1178;InbreedingCoeff=0.0855;MQ=51.15;MQ0=7;MQRankSum=-3.120;QD=8.21;ReadPosRankSum=4.673;VQSLOD=0.0170;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,1:9:10.94:11,0,17	0/0:3,0:3:8.89:0,9,93	0/0:9,0:6:11.95:0,12,226	0/0:16,0:9:16.11:0,16,142	./.	./.	0/0:11,23:28:2.79:0,3,14	0/0:8,0:7:5.55:0,6,28	0/1:4,3:7:35.71:227,0,36	0/0:10,0:8:12.03:0,12,352	0/0:1,0:1:3:0,3,25	0/0:7,0:7:14.95:0,15,357	0/1:3,2:4:10.95:136,0,11	0/1:10,2:11:53.15:160,0,53	1/1:4,0:4:4.72:41,5,0	0/0:4,0:4:9.03:0,9,344	0/1:15,3:17:95.65:246,0,96	0/1:9,17:23:35.36:133,0,35	0/0:15,0:14:17:0,17,191	0/0:1,0:1:2.99:0,3,23	0/0:53,0:50:90.54:0,91,1855	0/0:1,1:2:2.37:0,2,8	0/0:1,4:5:0.47:0,0,1	0/1:12,16:27:0.84:1,0,1	1/1:1,4:5:3.01:73,3,0	1/1:10,1:8:9:123,9,0	0/0:6,0:6:9.02:0,9,249	0/1:1,1:2:66.61:67,0,81
chr10	102681684	.	CTGCCTGA	C	338.53	PASS	AB=0.870;AC=14;AF=0.280;AN=50;BaseQRankSum=5.923;DP=287;FS=11.981;HRun=0;HaplotypeScore=71.1684;InbreedingCoeff=0.1022;MQ=46.96;MQ0=13;MQRankSum=-5.364;QD=3.02;ReadPosRankSum=-1.655;VQSLOD=0.3652;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:8:13.93:0,14,212	0/0:1,0:1:3.01:0,3,118	0/0:14,0:6:14.99:0,15,216	0/0:22,0:13:3.75:0,4,709	0/0:4,0:3:3:0,3,97	./.	0/1:33,1:26:29.68:30,0,536	0/0:4,0:4:12.04:0,12,278	0/1:7,1:8:35.81:47,0,36	0/0:6,0:5:9.02:0,9,288	./.	0/0:9,0:9:24.05:0,24,635	1/1:4,0:3:3.45:23,3,0	0/1:5,1:6:53.49:53,0,58	1/1:3,0:2:2.60:10,3,0	0/0:3,0:3:9.03:0,9,340	0/1:7,0:7:21.08:21,0,134	1/1:15,1:15:3.07:107,3,0	0/0:8,0:7:11.91:0,12,264	0/0:1,0:1:3.01:0,3,115	0/0:74,0:68:99:0,166,4876	0/0:4,0:4:3.01:0,3,71	./.	1/1:19,3:21:13.19:79,13,0	0/0:4,1:5:0.81:0,1,79	0/1:6,3:9:48.71:49,0,259	0/0:4,0:4:12.04:0,12,337	0/1:2,1:3:33.68:63,0,34
chr10	102681759	.	T	TGCTGCCC	946.96	PASS	AB=0.933;AC=18;AF=0.360;AN=50;BaseQRankSum=1.419;DP=270;FS=0.000;HRun=0;HaplotypeScore=69.8545;InbreedingCoeff=0.0443;MQ=45.69;MQ0=9;MQRankSum=-4.574;QD=7.76;ReadPosRankSum=-1.549;VQSLOD=1.2901;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:6:0.62:1,0,54	0/0:4,0:4:8.71:0,9,101	0/0:11,0:2:6.02:0,6,132	0/0:9,0:3:8.90:0,9,80	0/0:3,0:3:6:0,6,62	./.	0/1:14,4:12:91.22:256,0,91	0/0:4,0:4:9:0,9,81	0/1:3,3:5:20.24:115,0,20	0/0:7,0:7:18.05:0,18,325	./.	0/0:9,0:9:21.06:0,21,446	0/1:8,0:8:37.21:175,0,37	1/1:4,0:3:6.01:72,6,0	1/1:1,3:4:3.01:112,3,0	0/0:2,0:2:6.02:0,6,143	0/1:7,1:11:27.39:85,0,27	0/1:13,1:11:80.53:81,0,156	0/0:15,0:13:24.05:0,24,419	0/1:2,0:2:11.21:11,0,54	0/0:74,0:70:99:0,113,1950	0/0:6,0:6:0:0,0,0	0/1:4,0:4:0:0,0,0	0/1:21,0:19:94.01:94,0,121	1/1:6,0:6:5.85:59,6,0	0/1:9,0:7:9.97:10,0,108	./.	1/1:4,0:2:2.97:20,3,0
chr10	102681963	.	ACTGCCCGCTGCCCG	A	405.21	PASS	AB=1.000;AC=11;AF=0.212;AN=52;BaseQRankSum=1.411;DP=344;FS=3.370;HRun=0;HaplotypeScore=118.5075;InbreedingCoeff=-0.1581;MQ=49.11;MQ0=6;MQRankSum=-4.266;QD=2.37;ReadPosRankSum=2.471;VQSLOD=2.0041;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:11:6.02:105,6,0	0/0:3,0:3:6.02:0,6,238	0/0:6,0:5:5.47:0,5,25	0/0:6,0:4:9.03:0,9,136	./.	./.	0/1:42,0:39:18.69:19,0,347	0/0:4,0:3:9.03:0,9,309	0/0:7,0:7:5.99:0,6,48	0/0:12,0:11:24.07:0,24,876	0/0:1,0:1:3.01:0,3,115	0/0:10,0:10:24.07:0,24,974	0/1:7,0:7:34.78:35,0,96	0/0:13,0:13:9.92:0,10,187	0/1:8,0:7:63.74:64,0,118	0/0:2,0:2:6:0,6,115	0/1:24,0:22:68.32:68,0,198	0/1:20,0:20:21.23:21,0,268	0/0:15,0:14:27.09:0,27,620	0/0:3,0:3:5.93:0,6,62	0/0:71,0:71:99:0,133,4151	0/0:5,7:9:3.01:0,3,68	0/0:2,0:2:4.25:0,4,29	0/1:32,0:29:41.93:42,0,117	0/1:10,0:10:5.24:5,0,9	0/1:12,0:11:99:102,0,174	0/0:2,0:2:6.02:0,6,90	0/1:4,0:4:68.42:81,0,68
chr10	102681969	.	C	CGCTGCCT	2067.48	PASS	AB=0.937;AC=18;AF=0.360;AN=50;BaseQRankSum=0.847;DP=336;FS=17.886;HRun=0;HaplotypeScore=81.1453;InbreedingCoeff=0.2242;MQ=49.38;MQ0=7;MQRankSum=-7.394;QD=11.49;ReadPosRankSum=1.852;VQSLOD=0.6397;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:5,5:12:12.97:78,0,13	0/0:4,0:4:9:0,9,161	0/0:5,0:4:5.57:0,6,31	0/0:7,0:4:8.58:0,9,88	./.	./.	0/1:41,0:38:75.01:218,0,75	0/0:4,0:3:9.03:0,9,167	./.	0/0:12,0:11:24.50:0,25,386	0/0:1,0:1:3.01:0,3,68	0/0:10,0:10:27:0,27,445	1/1:7,0:7:12.04:382,12,0	1/1:16,0:16:11.93:262,12,0	0/1:8,0:7:19.54:267,0,20	0/0:3,0:3:8.99:0,9,98	0/1:22,0:20:55.62:149,0,56	0/1:20,0:20:40.77:341,0,41	0/0:12,0:11:26.98:0,27,332	0/0:4,0:4:5.93:0,6,40	0/0:69,0:68:99:0,155,2267	0/0:12,0:9:2.54:0,3,18	1/1:2,0:2:2.96:19,3,0	0/1:31,0:28:23.11:151,0,23	1/1:7,0:7:3.31:19,3,0	1/1:10,0:10:6.95:253,7,0	0/0:2,0:2:5.94:0,6,44	1/1:3,0:3:1.86:86,2,0
chr10	102681971	.	C	CTGCCTGA	2730.33	PASS	AB=0.575;AC=18;AF=0.360;AN=50;BaseQRankSum=-3.523;DP=364;FS=22.554;HRun=0;HaplotypeScore=80.6179;InbreedingCoeff=0.2183;MQ=50.74;MQ0=8;MQRankSum=-6.315;QD=13.19;ReadPosRankSum=1.196;VQSLOD=0.5419;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,1:12:5.46:124,5,0	0/0:4,0:4:9.03:0,9,201	0/0:4,0:3:5.47:0,5,25	0/0:7,0:4:9.02:0,9,131	./.	./.	0/1:17,26:44:99:287,0,127	0/0:4,0:3:9.03:0,9,228	./.	0/0:12,0:11:30.08:0,30,557	0/0:1,0:1:3.01:0,3,77	0/0:11,0:11:27.08:0,27,541	1/1:4,5:9:12.04:438,12,0	1/1:3,12:18:8.01:289,8,0	0/1:3,5:9:12.99:321,0,13	0/0:3,0:3:9.01:0,9,145	0/1:9,12:25:71.58:203,0,72	0/1:5,13:22:61.11:422,0,61	0/0:11,0:10:27.09:0,27,550	0/0:4,0:4:9.02:0,9,115	0/0:67,0:66:99:0,159,3058	0/0:11,0:8:2.66:0,3,41	1/1:2,0:2:2.99:37,3,0	0/1:8,21:33:53.01:189,0,53	1/1:2,4:8:5.55:48,6,0	0/1:1,8:11:17.96:406,0,18	0/0:2,0:2:6.02:0,6,90	1/1:3,0:3:0.14:123,0,0
chr10	102684256	.	CAAGGGACACCATTA	C	34142.05	PASS	AB=0.556;AC=29;AF=0.518;AN=56;BaseQRankSum=19.778;DP=736;FS=10.524;HRun=0;HaplotypeScore=303.1518;InbreedingCoeff=0.9199;MQ=55.32;MQ0=3;MQRankSum=-20.697;QD=91.05;ReadPosRankSum=5.867;VQSLOD=3.5036;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,35:42:81.28:3202,81,0	0/0:12,0:12:36.12:0,36,2543	0/0:23,0:21:63.22:0,63,3646	0/0:29,0:25:75.26:0,75,4286	0/0:29,0:29:81.28:0,81,5407	1/1:4,25:29:66.23:2815,66,0	1/1:7,29:36:72.25:2976,72,0	0/0:31,0:31:84.28:0,84,5513	0/1:4,16:20:99:1746,0,167	0/0:27,0:27:81.28:0,81,5566	0/0:27,0:27:81.26:0,81,5068	0/0:34,0:34:99:0,99,6163	1/1:2,25:27:69.24:2943,69,0	1/1:2,28:30:75.26:3199,75,0	1/1:3,25:28:72.25:3070,72,0	0/0:25,0:25:75.26:0,75,4820	1/1:3,25:28:54.18:2085,54,0	1/1:3,12:15:21.07:896,21,0	0/0:18,0:16:44.95:0,45,2616	0/0:29,0:29:84.25:0,84,5181	0/0:45,0:45:99:0,132,8380	1/1:0,23:23:66.23:2741,66,0	1/1:1,18:19:42.14:1791,42,0	1/1:3,15:18:30.10:1151,30,0	1/1:5,18:25:45.15:1919,45,0	1/1:2,24:26:78.27:3223,78,0	0/0:32,0:32:93.32:0,93,6469	1/1:6,3:9:9.03:384,9,0
chr10	102684993	.	GGT	G	74.30	PASS	AB=1.000;AC=15;AF=0.357;AN=42;BaseQRankSum=0.712;DP=596;FS=0.000;HRun=0;HaplotypeScore=91.8902;InbreedingCoeff=0.2720;MQ=69.17;MQ0=10;MQRankSum=-0.091;QD=0.36;ReadPosRankSum=0.018;VQSLOD=1.5039;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:10,0:9:0:0,0,0	./.	./.	0/0:21,0:21:5.46:0,5,87	0/0:13,0:13:0.94:0,1,2	./.	0/0:25,0:24:4.26:0,4,11	0/0:17,0:15:0:0,0,0	0/1:23,0:23:0.89:2,0,1	0/0:14,0:14:7.57:0,8,88	0/1:20,0:20:22.37:22,0,58	0/0:24,0:23:6.42:0,6,43	0/0:19,0:19:5.94:0,6,43	./.	0/1:17,0:17:22.19:25,0,22	1/1:23,0:23:0.47:1,0,0	0/0:13,0:12:1.83:0,2,15	./.	1/1:18,1:19:5.68:63,6,0	1/1:34,8:41:3.01:32,3,0	0/0:15,0:15:5.65:0,6,50	0/0:22,0:22:2.97:0,3,20	1/1:26,0:25:0.47:1,0,0	0/0:21,0:20:8.98:0,9,72	1/1:29,0:29:2.22:7,2,0	1/1:10,0:10:3.01:31,3,0	./.
chr10	102685042	.	G	GAA	859.60	PASS	AB=0.982;AC=22;AF=0.393;AN=56;BaseQRankSum=8.334;DP=446;FS=31.089;HRun=0;HaplotypeScore=153.1856;InbreedingCoeff=0.0786;MQ=35.28;MQ0=23;MQRankSum=-7.628;QD=3.75;ReadPosRankSum=-2.666;VQSLOD=1.0053;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:9:2.91:6,3,0	1/1:10,0:9:3.93:9,4,0	0/0:26,0:10:7.30:0,7,192	0/0:36,0:14:27.06:0,27,474	0/0:16,0:16:9.40:0,9,184	0/0:13,1:13:6.76:0,7,86	1/1:10,0:7:8.55:35,9,0	0/1:22,0:20:48.30:48,0,519	1/1:10,0:7:5.09:17,5,0	0/1:18,0:17:99:201,0,167	0/1:15,0:16:27.18:27,0,155	0/0:17,0:14:13.39:0,13,192	0/1:18,0:16:35.31:35,0,78	0/0:13,1:14:0.77:0,1,35	0/1:14,0:13:0.31:15,0,0	0/1:16,0:15:89.77:90,0,177	0/1:13,0:13:41.08:41,0,43	0/0:9,0:8:21.15:0,21,197	0/1:13,1:13:7.57:8,0,343	0/1:21,3:23:58.56:59,0,121	0/0:30,0:29:23.11:0,23,344	0/0:15,0:13:8.58:0,9,81	0/0:18,0:17:4.95:0,5,84	1/1:17,0:16:1.10:3,1,0	0/0:15,0:15:6.11:0,6,143	0/1:11,0:11:19.96:310,0,20	0/0:7,0:7:15.03:0,15,176	1/1:6,0:6:10.18:118,10,0
chr10	102685050	.	G	GCA	932.74	PASS	AB=0.740;AC=30;AF=0.536;AN=56;BaseQRankSum=7.736;DP=346;FS=5.110;HRun=0;HaplotypeScore=109.7678;InbreedingCoeff=0.2467;MQ=38.14;MQ0=18;MQRankSum=-5.271;QD=5.65;ReadPosRankSum=-0.642;VQSLOD=2.7514;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,1:1:0.89:2,1,0	1/1:4,5:9:1.88:5,2,0	0/0:28,0:12:18.09:0,18,405	0/0:38,0:14:42.14:0,42,644	0/0:7,9:16:10.98:0,11,190	1/1:3,4:6:0.72:3,1,0	1/1:3,3:3:1.77:5,2,0	0/1:16,2:16:53.90:54,0,525	1/1:2,2:3:4.25:35,4,0	0/1:12,7:18:99:293,0,290	0/0:9,7:16:4.56:0,5,153	0/0:12,2:12:12.69:0,13,194	0/1:3,4:5:0.61:1,0,1	1/1:1,4:5:0.42:1,0,0	1/1:0,8:8:6.40:18,6,0	0/0:12,4:15:11.99:0,12,234	1/1:7,1:8:2.85:13,3,0	0/0:6,0:5:1.32:0,1,66	0/1:14,1:14:47.65:48,0,352	0/1:12,10:22:21.40:21,0,191	0/0:29,0:28:23.13:0,23,391	1/1:2,5:6:0.79:3,1,0	1/1:1,3:3:2.66:7,3,0	0/0:11,0:10:0.66:0,1,1	1/1:2,5:7:0.72:2,1,0	0/1:2,9:11:18.91:463,0,19	0/0:7,0:7:12.04:0,12,178	1/1:1,5:6:4.78:104,5,0
chr10	102685055	.	TG	T	259.63	PASS	AB=0.966;AC=27;AF=0.482;AN=56;BaseQRankSum=7.033;DP=324;FS=5.660;HRun=2;HaplotypeScore=83.8875;InbreedingCoeff=0.4622;MQ=38.21;MQ0=15;MQRankSum=-5.839;QD=2.24;ReadPosRankSum=2.850;VQSLOD=-0.5419;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,1:1:2.04:6,2,0	0/0:9,0:9:0.84:0,1,2	0/0:28,0:12:27.03:0,27,369	0/0:38,0:14:39.13:0,39,578	0/0:16,0:16:8.25:0,8,128	1/1:6,0:5:2.51:11,3,0	1/1:4,0:3:0.89:2,1,0	0/0:17,0:15:15.39:0,15,446	0/1:3,0:2:0:0,0,0	0/1:17,0:16:67.15:67,0,271	0/0:16,0:16:4.76:0,5,127	0/0:13,0:11:17.93:0,18,184	1/1:5,0:5:2.76:6,3,0	0/1:5,0:5:0:0,0,0	1/1:8,0:8:4.90:18,5,0	0/0:14,1:14:17.17:0,17,223	1/1:7,0:7:0.89:3,1,0	1/1:6,0:5:12.44:107,12,0	0/1:15,1:15:15.88:16,0,394	0/0:17,2:19:9.49:0,9,158	0/0:27,0:26:26.63:0,27,379	1/1:6,1:6:0.47:1,0,0	0/0:4,0:3:2.43:0,2,9	0/1:7,1:7:0:0,0,0	1/1:6,0:6:2.74:12,3,0	1/1:10,0:10:26.08:130,26,0	0/0:6,0:6:12.03:0,12,165	1/1:6,0:6:1.03:27,1,0
chr10	102685056	.	G	GT	115.03	PASS	AB=0.778;AC=7;AF=0.206;AN=34;BaseQRankSum=3.387;DP=211;FS=0.000;HRun=1;HaplotypeScore=49.6010;InbreedingCoeff=0.3821;MQ=42.49;MQ0=14;MQRankSum=-3.043;QD=3.29;ReadPosRankSum=0.741;VQSLOD=-0.2958;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:2,1:3:0.89:0,1,2	0/0:28,0:12:27.08:0,27,344	0/0:38,0:14:39.13:0,39,540	0/0:6,0:6:8.92:0,9,123	./.	./.	0/0:14,0:12:32.98:0,33,436	./.	0/1:8,1:9:13.74:14,0,267	0/0:9,0:9:3.03:0,3,116	0/0:9,0:7:17.47:0,17,184	./.	./.	./.	0/0:11,0:10:17.51:0,18,207	0/1:0,5:5:0.01:0,0,0	1/1:0,6:5:12.51:144,13,0	0/1:13,1:13:16.64:17,0,376	0/0:9,0:9:11.58:0,12,145	0/0:23,3:26:26.88:0,27,351	./.	./.	0/0:2,5:7:2.50:0,2,9	./.	./.	0/0:5,1:6:11.62:0,12,154	1/1:0,1:1:3.01:47,3,0
chr10	102685238	.	G	GA	78.45	PASS	AC=24;AF=0.571;AN=42;BaseQRankSum=-1.455;DP=71;FS=13.222;HRun=0;HaplotypeScore=13.6129;InbreedingCoeff=0.3359;MQ=46.66;MQ0=37;MQRankSum=-0.336;QD=3.02;ReadPosRankSum=-1.306;VQSLOD=0.0572;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,2:2:0.94:2,1,0	0/0:0,1:1:0:0,0,0	0/0:16,0:1:3.01:0,3,41	0/0:12,0:1:3.01:0,3,39	./.	1/1:0,3:3:0.47:2,0,0	0/0:0,1:1:0.47:0,0,1	1/1:2,2:2:6.02:71,6,0	0/0:1,1:1:0:0,0,0	1/1:0,1:1:3.01:36,3,0	1/1:0,2:2:0.47:1,0,0	0/0:0,1:1:2.90:0,3,16	1/1:0,2:2:0.13:1,0,0	./.	1/1:0,1:1:0.47:1,0,0	0/0:0,3:3:3.37:0,3,17	./.	./.	./.	1/1:0,1:1:0.47:1,0,0	0/0:1,1:1:2.90:0,3,16	1/1:0,1:1:0.47:1,0,0	1/1:0,1:1:0.47:1,0,0	0/0:1,1:1:0:0,0,0	./.	1/1:0,1:1:3.01:37,3,0	1/1:0,3:3:1.64:16,2,0	./.
chr10	102685248	.	C	CA	340.47	PASS	AC=30;AF=0.789;AN=38;BaseQRankSum=-1.734;DP=59;FS=0.000;HRun=0;HaplotypeScore=12.5603;InbreedingCoeff=0.3007;MQ=51.18;MQ0=25;MQRankSum=-1.734;QD=10.98;ReadPosRankSum=1.569;VQSLOD=3.2969;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,2:2:0.47:1,0,0	0/0:0,1:1:0:0,0,0	./.	0/0:8,0:1:1.55:0,2,4	./.	1/1:0,3:3:3.48:43,3,0	1/1:0,1:1:3.01:40,3,0	1/1:1,2:2:6.02:78,6,0	0/0:1,1:1:0:0,0,0	1/1:0,1:1:3.01:39,3,0	1/1:0,2:2:0.47:1,0,0	1/1:0,1:1:2.60:10,3,0	1/1:0,2:2:0.09:1,0,0	./.	1/1:0,1:1:0.47:1,0,0	1/1:0,3:3:5:50,5,0	./.	./.	./.	1/1:0,1:1:0.47:1,0,0	1/1:1,1:1:2.60:10,3,0	./.	1/1:0,1:1:0.47:1,0,0	0/0:0,1:1:0:0,0,0	./.	1/1:0,1:1:3.01:39,3,0	1/1:0,3:3:9:101,9,0	./.
chr10	102687138	.	CT	C	6850.57	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=8.943;DP=473;FS=22.942;HRun=6;HaplotypeScore=52.6449;InbreedingCoeff=0.9899;MQ=79.36;MQ0=1;MQRankSum=0.650;QD=28.43;ReadPosRankSum=2.758;VQSLOD=3.0756;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:99:1064,99,0	0/0:7,0:7:15.05:0,15,197	0/0:14,0:14:35.46:0,35,457	0/0:19,0:17:41.20:0,41,495	0/0:22,0:22:60.19:0,60,785	1/1:3,21:24:60.15:645,60,0	1/1:0,19:19:54.14:580,54,0	0/0:32,0:32:93.30:0,93,1223	1/1:0,12:12:33.08:355,33,0	0/0:17,0:17:51.17:0,51,671	0/0:5,0:5:15.05:0,15,197	0/0:15,0:15:45.15:0,45,589	1/1:1,14:15:45.10:472,45,0	1/1:0,13:13:29.91:320,30,0	1/1:2,8:10:18.04:193,18,0	0/0:5,0:5:15.05:0,15,197	1/1:1,22:23:54.14:580,54,0	1/1:0,24:24:66.17:709,66,0	0/0:14,0:14:42.12:0,42,535	0/0:13,0:13:39.13:0,39,512	0/0:13,0:13:39.13:0,39,512	1/1:1,15:16:42.10:451,42,0	1/1:0,10:10:30.07:319,30,0	1/1:1,24:25:69.17:742,69,0	1/1:1,14:15:39.10:419,39,0	0/0:30,0:30:84.27:0,84,1105	0/0:20,0:20:54.16:0,54,693	0/0:6,0:6:15.05:0,15,197
chr10	102687685	.	A	ATGTG	1528.61	PASS	AB=0.791;AC=23;AF=0.411;AN=56;BaseQRankSum=6.832;DP=584;FS=21.874;HRun=0;HaplotypeScore=114.3052;InbreedingCoeff=0.5575;MQ=69.39;MQ0=9;MQRankSum=-2.694;QD=5.25;ReadPosRankSum=-0.601;VQSLOD=0.8286;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,1:26:10.87:95,0,11	0/0:9,0:9:21.01:0,21,291	0/0:27,0:18:28.74:0,29,272	0/0:25,0:15:42.86:0,43,609	0/0:27,0:27:80.94:0,81,1107	0/1:15,13:29:28.27:69,0,28	0/1:9,16:25:10.83:106,0,11	0/0:30,0:29:71.79:0,72,749	1/1:17,0:17:13.97:117,14,0	0/0:17,0:16:42.14:0,42,684	0/0:19,0:19:48.12:0,48,738	0/0:17,0:17:21.37:0,21,646	1/1:12,1:12:11.26:122,11,0	1/1:6,17:23:10.99:174,11,0	1/1:5,13:18:4.32:137,4,0	0/0:21,0:21:57.05:0,57,764	1/1:5,22:29:14.56:344,15,0	1/1:15,0:16:14.58:168,15,0	0/0:18,0:18:47.97:0,48,689	0/0:19,0:19:48.06:0,48,730	0/0:35,0:34:84.19:0,84,1275	1/1:5,15:20:2.74:67,3,0	1/1:23,0:23:8.23:53,8,0	1/1:12,1:13:12.44:167,12,0	0/1:12,8:20:23.53:61,0,24	0/1:18,0:18:12.63:47,0,13	0/0:19,0:19:53.93:0,54,689	0/0:10,0:9:10.83:0,11,49
chr10	102688723	.	CTCTGTG	C	4280.39	PASS	AB=0.682;AC=26;AF=0.464;AN=56;BaseQRankSum=8.165;DP=810;FS=2.104;HRun=0;HaplotypeScore=188.3724;InbreedingCoeff=0.7777;MQ=50.60;MQ0=24;MQRankSum=-1.388;QD=12.48;ReadPosRankSum=0.952;VQSLOD=4.3685;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:37:3.01:0,3,75	0/0:8,0:8:12.04:0,12,334	0/0:41,0:13:34.85:0,35,381	0/0:64,0:22:23.15:0,23,333	0/0:23,0:23:63.08:0,63,1622	1/1:14,9:22:17.95:248,18,0	1/1:4,33:35:7.21:77,7,0	0/0:44,0:36:99:0,105,1806	1/1:5,30:35:14.99:285,15,0	0/0:31,0:29:87.25:0,87,2019	0/0:19,0:19:42.11:0,42,1160	0/0:26,0:26:69.21:0,69,2009	1/1:11,15:26:26.98:490,27,0	1/1:16,16:30:20.58:225,21,0	1/1:15,11:24:5.92:113,6,0	0/0:26,0:26:63.12:0,63,1437	1/1:16,4:19:26.88:380,27,0	1/1:8,0:7:9.02:158,9,0	0/0:30,0:26:51.10:0,51,1130	0/0:25,0:24:66.21:0,66,1727	0/0:53,0:53:99:0,129,3146	1/1:19,10:28:17.95:391,18,0	1/1:11,10:20:17.72:276,18,0	0/1:15,4:19:25.75:35,0,26	1/1:16,13:28:23.93:391,24,0	0/1:4,24:27:23.21:1022,0,23	0/0:36,0:35:96.29:0,96,2571	1/1:2,8:10:8.24:189,8,0
chr10	102688729	.	G	GTCTCTGTC	5133.13	PASS	AB=0.768;AC=28;AF=0.500;AN=56;BaseQRankSum=8.342;DP=819;FS=1.965;HRun=0;HaplotypeScore=204.7677;InbreedingCoeff=0.7831;MQ=49.76;MQ0=27;MQRankSum=-2.218;QD=13.09;ReadPosRankSum=-1.828;VQSLOD=3.8649;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:6,34:40:17.98:18,0,56	0/0:6,0:6:12.04:0,12,316	0/0:42,0:14:37.08:0,37,384	0/0:61,0:19:21.04:0,21,329	0/0:23,0:23:63.06:0,63,1442	1/1:24,0:23:20.98:273,21,0	1/1:38,0:36:7.49:78,7,0	0/0:47,0:38:99:0,114,1864	1/1:35,0:36:21.04:479,21,0	0/0:31,0:29:87.24:0,87,1844	0/0:18,0:18:42.11:0,42,1027	0/0:24,0:24:69.21:0,69,1715	1/1:27,0:27:30.05:600,30,0	1/1:31,0:29:21.25:331,21,0	1/1:23,0:21:5.80:113,6,0	0/0:25,0:25:63.12:0,63,1256	1/1:25,0:25:32.83:506,33,0	1/1:9,0:8:9.02:158,9,0	0/0:30,0:25:57.08:0,57,1067	0/0:26,0:25:68.23:0,68,1615	0/0:56,0:56:99:0,144,2931	1/1:28,0:27:21.01:416,21,0	1/1:24,0:23:18.39:276,18,0	0/1:18,0:18:25.72:35,0,26	1/1:29,0:28:24.07:391,24,0	1/1:26,0:25:2.65:1247,3,0	0/0:38,0:37:99:0,105,2340	1/1:9,0:9:9.03:211,9,0
chr10	102688803	.	CTGTCTCTCTCTG	C	2342.36	PASS	AB=0.658;AC=21;AF=0.389;AN=54;BaseQRankSum=6.924;DP=690;FS=7.603;HRun=0;HaplotypeScore=198.9161;InbreedingCoeff=0.6176;MQ=54.00;MQ0=13;MQRankSum=-3.529;QD=7.56;ReadPosRankSum=1.808;VQSLOD=2.0384;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,2:22:14.96:372,15,0	0/0:7,0:7:17.84:0,18,834	0/0:24,0:11:33.07:0,33,478	0/0:27,0:14:14.67:0,15,352	0/0:20,0:20:57.20:0,57,2032	1/1:4,18:22:5.95:166,6,0	1/1:22,0:19:15.04:249,15,0	0/0:33,0:31:78.23:0,78,1599	1/1:13,6:19:14.98:363,15,0	0/0:26,0:26:75.23:0,75,2304	0/0:11,0:11:33.10:0,33,1630	0/0:27,0:27:69.24:0,69,3287	1/1:6,17:23:20.84:597,21,0	0/1:11,19:28:56.82:214,0,57	1/1:7,23:29:9.03:236,9,0	0/0:27,0:27:72.16:0,72,2830	0/1:10,20:30:86.22:86,0,121	1/1:1,12:13:3.01:110,3,0	0/0:30,0:29:78.23:0,78,2127	0/0:24,0:24:66.20:0,66,2462	0/0:37,0:37:99:0,105,3084	1/1:8,21:28:3.01:58,3,0	0/1:1,17:18:0:0,0,0	./.	0/1:5,17:22:0.09:0,0,0	0/0:25,0:22:22.79:0,23,1841	0/0:36,0:36:96.28:0,96,3090	0/1:24,0:24:73.90:74,0,2636
chr10	102688809	.	C	CTG	1367.92	PASS	AB=0.932;AC=21;AF=0.389;AN=54;BaseQRankSum=7.681;DP=675;FS=11.592;HRun=0;HaplotypeScore=117.9927;InbreedingCoeff=0.6110;MQ=54.58;MQ0=13;MQRankSum=-2.715;QD=4.62;ReadPosRankSum=-0.078;VQSLOD=2.3716;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,11:24:23.68:362,24,0	0/0:9,0:9:23.83:0,24,325	0/0:24,0:11:33.07:0,33,443	0/0:24,0:13:8.92:0,9,280	0/0:21,0:21:60.19:0,60,890	1/1:21,1:22:5.74:69,6,0	1/1:7,10:14:14.87:248,15,0	0/0:33,0:31:87.24:0,87,1248	1/1:13,7:20:20.81:277,21,0	0/0:30,0:30:84.24:0,84,1142	0/0:14,0:14:36.09:0,36,508	0/0:25,0:25:71.81:0,72,1075	1/1:17,2:20:18.24:194,18,0	0/1:23,1:22:33.89:101,0,34	1/1:24,3:26:8.87:92,9,0	0/0:28,0:28:84.16:0,84,1169	0/1:27,2:29:48.31:48,0,50	1/1:13,1:13:0.40:1,0,0	0/0:32,0:30:84.25:0,84,1199	0/0:23,0:23:66.20:0,66,965	0/0:36,1:37:99:0,108,1537	1/1:24,1:25:3:58,3,0	./.	0/1:21,3:24:0:0,0,0	0/1:18,1:19:0.01:0,0,0	0/0:25,0:23:69.17:0,69,969	0/0:37,0:37:99:0,108,1480	0/1:23,2:25:95.32:95,0,829
chr10	102689373	.	TA	T	6280.08	PASS	AB=0.882;AC=31;AF=0.554;AN=56;BaseQRankSum=8.979;DP=564;FS=4.914;HRun=11;HaplotypeScore=63.7510;InbreedingCoeff=0.9176;MQ=75.09;MQ0=0;MQRankSum=-1.381;QD=18.97;ReadPosRankSum=6.055;VQSLOD=5.4889;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:31:71.91:591,72,0	0/0:6,0:7:20.89:0,21,206	0/0:23,1:19:5.20:0,5,232	0/0:11,0:10:14.97:0,15,133	0/0:27,1:30:53.18:0,53,716	1/1:2,10:12:29.95:246,30,0	1/1:2,16:18:44.95:370,45,0	0/0:18,0:18:45.08:0,45,454	1/1:2,18:21:55.96:449,56,0	0/0:20,1:21:29.48:0,29,512	0/0:14,0:14:29.05:0,29,318	0/0:18,1:19:23.47:0,23,446	1/1:2,16:18:47.94:394,48,0	1/1:2,12:14:35.96:296,36,0	1/1:3,20:23:53.93:442,54,0	0/0:21,1:22:26.18:0,26,446	1/1:3,33:36:95.88:788,96,0	1/1:4,17:23:54.28:429,54,0	0/1:13,2:15:7.35:7,0,284	0/0:27,0:27:57.12:0,57,595	0/0:14,0:14:27.54:0,28,288	1/1:4,18:25:57.03:436,57,0	1/1:3,19:22:53.93:443,54,0	1/1:1,6:8:20.02:154,20,0	1/1:3,26:30:76.94:622,77,0	1/1:8,16:24:47.88:391,48,0	0/0:24,1:26:41.34:0,41,622	1/1:1,10:11:26.96:222,27,0
chr10	102691912	.	C	CCTCT	25358.56	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-15.620;DP=712;FS=6.540;HRun=0;HaplotypeScore=105.3971;InbreedingCoeff=0.9977;MQ=90.84;MQ0=2;MQRankSum=-6.533;QD=63.56;ReadPosRankSum=5.848;VQSLOD=7.0252;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,42:48:99:2958,111,0	0/0:5,0:5:15.03:0,15,248	0/0:21,0:21:51.11:0,51,776	0/0:38,0:38:89.67:0,90,1589	0/0:16,0:16:42.12:0,42,722	1/1:2,23:24:60.21:1599,60,0	1/1:4,22:28:60.21:1600,60,0	0/0:30,0:30:84.28:0,84,1532	1/1:5,28:34:78.25:2005,78,0	0/0:27,0:27:78.27:0,78,1432	0/0:20,0:20:60.21:0,60,1103	0/0:29,0:29:78.25:0,78,1425	1/1:7,16:24:54.18:1359,54,0	1/1:5,16:23:48.16:1237,48,0	1/1:2,21:22:57.20:1519,57,0	0/0:19,0:19:57.20:0,57,1064	1/1:2,41:43:99:3120,117,0	1/1:2,17:19:39.13:1040,39,0	0/0:29,0:29:75.26:0,75,1380	0/0:11,0:11:33.11:0,33,615	0/0:43,0:43:99:0,115,2024	1/1:1,12:13:33.11:880,33,0	1/1:1,14:16:48.16:1278,48,0	1/1:3,31:34:81.28:2127,81,0	1/1:2,20:23:54.19:1439,54,0	1/1:5,24:31:84.29:2079,84,0	0/0:25,0:24:72.25:0,72,1326	1/1:0,14:14:42.14:1120,42,0
chr10	102692361	.	G	GT	833.70	PASS	AB=0.964;AC=6;AF=0.107;AN=56;BaseQRankSum=-4.240;DP=558;FS=0.610;HRun=10;HaplotypeScore=70.2177;InbreedingCoeff=0.6667;MQ=75.00;MQ0=5;MQRankSum=1.668;QD=9.26;ReadPosRankSum=-2.159;VQSLOD=2.0540;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,1:32:44.91:0,45,561	0/0:7,0:7:14.97:0,15,123	0/0:38,0:26:39.38:0,39,300	0/1:34,0:20:7.43:7,0,67	0/0:21,0:22:55.95:0,56,449	0/0:14,0:16:37.03:0,37,283	0/1:12,1:13:2.04:2,0,192	0/0:28,0:28:53.90:0,54,440	0/0:19,0:19:50.94:0,51,419	1/1:2,22:24:59.74:617,60,0	1/1:3,15:19:33.04:334,33,0	0/0:12,0:12:26.93:0,27,221	0/0:14,0:15:34.97:0,35,277	0/0:11,0:11:23.96:0,24,197	0/0:21,0:22:27.37:0,27,374	0/0:11,0:11:20.95:0,21,172	0/0:18,0:19:43.97:0,44,351	0/0:20,0:20:53.91:0,54,440	0/0:18,1:18:15.92:0,16,330	0/0:17,0:17:44.92:0,45,369	0/0:25,0:24:62.27:0,62,500	0/0:19,0:19:40.70:0,41,317	0/0:16,0:16:35.94:0,36,295	0/0:30,1:32:7.15:0,7,435	0/0:20,0:21:55.97:0,56,449	0/0:14,0:14:27.03:0,27,123	0/0:22,0:21:44.91:0,45,369	0/0:11,0:11:20.43:0,20,120
chr10	102692480	.	ACT	A	13923.82	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=12.535;DP=600;FS=1.709;HRun=0;HaplotypeScore=73.7079;InbreedingCoeff=0.9997;MQ=81.32;MQ0=2;MQRankSum=-2.265;QD=44.77;ReadPosRankSum=4.456;VQSLOD=6.6269;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:99:1858,114,0	0/0:9,0:9:27.09:0,27,522	0/0:10,0:10:26.92:0,27,497	0/0:24,0:24:66.19:0,66,1289	0/0:25,0:25:75.22:0,75,1431	1/1:0,21:21:51.17:832,51,0	1/1:0,26:26:72.25:1174,72,0	0/0:15,0:15:42.14:0,42,800	1/1:0,20:20:54.18:880,54,0	0/0:22,0:22:66.23:0,66,1329	0/0:15,0:15:45.15:0,45,905	0/0:26,0:26:78.24:0,78,1509	1/1:0,16:16:48.16:782,48,0	1/1:0,25:24:69.24:1124,69,0	1/1:0,25:25:69.23:1113,69,0	0/0:16,0:16:48.14:0,48,890	1/1:0,32:32:87.30:1419,87,0	1/1:0,23:23:66.23:1076,66,0	0/0:15,0:15:45.15:0,45,915	0/0:32,0:32:96.29:0,96,1862	0/0:21,0:21:63.19:0,63,1241	1/1:0,21:21:57.19:929,57,0	1/1:0,16:16:48.16:780,48,0	1/1:0,24:24:60.20:978,60,0	1/1:0,23:22:60.20:979,60,0	0/0:18,0:18:54.17:0,54,1053	0/0:29,0:29:87.28:0,87,1729	0/0:11,0:11:33.06:0,33,559
chr10	102692772	.	G	GT	930.91	PASS	AB=0.904;AC=9;AF=0.161;AN=56;BaseQRankSum=3.340;DP=573;FS=0.548;HRun=12;HaplotypeScore=64.9522;InbreedingCoeff=0.3923;MQ=71.68;MQ0=0;MQRankSum=0.457;QD=6.16;ReadPosRankSum=-0.816;VQSLOD=1.7421;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,2:23:30.46:0,30,387	0/0:12,0:12:31.80:0,32,220	0/1:11,0:11:1.33:1,0,6	0/0:12,0:9:2.95:0,3,21	0/0:33,1:34:45.27:0,45,494	0/0:29,0:29:63.82:0,64,459	0/0:10,0:10:29.83:0,30,219	0/0:22,0:24:36.78:0,37,252	0/0:19,0:19:47.65:0,48,346	0/1:24,2:28:6.04:6,0,267	0/0:22,1:25:37.49:0,37,418	0/0:18,0:19:49.75:0,50,356	0/0:16,1:17:41.70:0,42,305	0/0:20,3:23:24.48:0,24,343	0/0:20,0:20:44.67:0,45,327	0/0:17,0:17:44.69:0,45,328	0/0:25,0:25:62.61:0,63,460	0/0:17,0:17:35.70:0,36,258	0/0:16,0:17:40.76:0,41,287	0/1:29,4:33:8.07:8,0,385	0/1:7,2:9:40.45:40,0,70	0/0:17,0:18:40.79:0,41,290	0/1:17,2:19:10.66:11,0,257	0/0:14,1:16:14.62:0,15,257	0/0:21,2:23:31.09:0,31,368	1/1:7,25:32:69:646,69,0	0/0:20,0:22:52.62:0,53,362	1/1:2,16:19:23.97:359,24,0
chr10	102693738	.	AAGG	A	547.59	PASS	AB=0.629;AC=3;AF=0.054;AN=56;BaseQRankSum=2.624;DP=748;FS=2.161;HRun=0;HaplotypeScore=126.8739;InbreedingCoeff=0.4372;MQ=45.34;MQ0=55;MQRankSum=-4.391;QD=20.28;ReadPosRankSum=-1.454;VQSLOD=3.5071;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,1:50:99:0,135,3079	0/0:5,0:4:9.03:0,9,163	0/0:41,0:7:17.79:0,18,334	0/0:39,0:8:18.02:0,18,326	0/0:23,0:21:57.15:0,57,1123	0/0:24,1:22:29.55:0,30,1118	0/0:27,0:20:45.14:0,45,894	0/0:29,0:15:30.82:0,31,619	0/0:26,1:22:54.16:0,54,1073	0/0:38,0:37:99:0,102,2202	0/0:12,0:13:30.06:0,30,606	0/0:32,1:29:67.96:0,68,1379	0/0:35,0:29:75.23:0,75,1544	0/0:18,0:16:39.13:0,39,953	0/0:14,0:10:26.88:0,27,639	0/0:34,0:30:63.32:0,63,1780	0/0:23,1:21:13.41:0,13,1128	0/0:20,0:15:42.14:0,42,991	0/0:25,0:11:27.09:0,27,624	0/0:21,0:21:48.15:0,48,1001	0/0:44,0:35:92.84:0,93,2150	0/0:28,0:27:78.17:0,78,1585	0/0:14,0:14:30.06:0,30,590	0/0:50,0:45:99:0,123,2688	0/0:23,0:22:57.19:0,57,1307	0/1:9,13:19:83.76:583,0,84	0/0:16,0:12:36.12:0,36,829	1/1:2,3:3:3.01:56,3,0
chr10	102693783	.	AT	A	10266.72	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=-4.687;DP=411;FS=19.658;HRun=1;HaplotypeScore=71.7522;InbreedingCoeff=0.7274;MQ=61.31;MQ0=10;MQRankSum=-2.815;QD=29.25;ReadPosRankSum=2.860;VQSLOD=3.3737;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:25:51.17:713,51,0	1/1:0,2:2:6.02:84,6,0	0/0:31,2:12:12.42:0,12,236	0/0:24,3:10:2.74:0,3,23	1/1:0,18:16:45.15:629,45,0	1/1:0,12:12:33.11:461,33,0	1/1:1,11:11:24.05:309,24,0	1/1:1,6:6:12.51:169,13,0	1/1:0,10:10:21.07:294,21,0	1/1:5,18:19:54.17:737,54,0	1/1:0,17:17:30.06:397,30,0	1/1:1,14:13:30.10:415,30,0	1/1:0,12:11:24.08:335,24,0	1/1:1,15:14:21.06:294,21,0	1/1:0,11:11:24.08:328,24,0	1/1:1,16:15:39.13:542,39,0	1/1:1,10:10:18.06:252,18,0	1/1:0,11:10:30.10:417,30,0	1/1:1,7:7:18.06:251,18,0	1/1:1,11:12:24.03:306,24,0	1/1:2,24:20:54.18:754,54,0	1/1:0,16:16:39.13:541,39,0	1/1:0,13:12:18.02:224,18,0	1/1:0,25:24:69.23:964,69,0	1/1:1,14:15:27.07:349,27,0	1/1:0,1:3:3.01:42,3,0	1/1:1,11:11:33.11:461,33,0	./.
chr10	102693825	.	GAGA	G	338.72	PASS	AB=0.971;AC=15;AF=0.268;AN=56;BaseQRankSum=3.287;DP=574;FS=6.210;HRun=0;HaplotypeScore=90.3741;InbreedingCoeff=-0.2431;MQ=30.53;MQ0=106;MQRankSum=-5.197;QD=1.19;ReadPosRankSum=-1.898;VQSLOD=0.3878;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:19:16.11:16,0,243	0/0:11,0:8:15.05:0,15,321	0/0:15,0:3:6.02:0,6,120	0/1:30,0:3:3.79:22,0,4	0/0:20,0:14:32.90:0,33,631	0/1:16,0:11:11.03:11,0,184	0/1:17,1:12:44.67:45,0,135	0/0:34,0:10:14.97:0,15,235	0/1:22,2:21:25.98:26,0,198	0/0:36,0:25:39.96:0,40,1214	0/0:18,0:16:30.07:0,30,552	0/0:21,0:11:17.69:0,18,281	0/1:20,0:11:15.25:15,0,166	0/1:16,0:8:27.01:27,0,30	0/0:13,0:9:2.49:0,2,108	0/0:20,0:13:17.50:0,17,324	0/0:12,1:8:6.02:0,6,124	0/1:17,0:6:36.10:36,0,86	0/1:23,0:5:7.96:8,0,181	0/1:21,0:19:21.05:21,0,191	0/0:40,0:18:1.76:0,2,464	0/1:16,3:13:52.53:53,0,122	0/0:16,0:13:11.90:0,12,136	0/1:21,0:11:41.75:42,0,338	0/0:22,0:19:11.96:0,12,171	0/1:22,3:18:99:148,0,116	0/0:11,0:7:6.04:0,6,324	1/1:6,0:2:2.97:20,3,0
chr10	102693827	.	GAAA	G	602.52	PASS	AB=0.940;AC=18;AF=0.321;AN=56;BaseQRankSum=4.762;DP=566;FS=4.497;HRun=3;HaplotypeScore=86.5206;InbreedingCoeff=-0.3614;MQ=30.21;MQ0=105;MQRankSum=-5.002;QD=1.66;ReadPosRankSum=1.365;VQSLOD=-0.5733;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:25,1:17:37.42:37,0,155	0/0:10,0:7:15.05:0,15,325	0/0:14,0:3:6.02:0,6,113	0/1:28,1:3:10.65:11,0,31	0/0:21,2:16:32.33:0,32,651	0/1:14,1:10:48.26:48,0,138	0/1:16,3:12:20.01:20,0,59	0/0:35,0:9:18.84:0,19,244	0/1:22,1:20:79.22:79,0,114	0/1:35,0:25:0.40:0,0,1237	0/0:17,0:15:26.76:0,27,555	0/0:23,0:13:21.77:0,22,334	0/1:19,1:11:32.20:32,0,95	0/1:15,1:8:17.65:46,0,18	0/1:13,0:9:27.90:28,0,65	0/0:19,0:13:20.78:0,21,337	0/0:13,0:8:6.02:0,6,87	0/1:15,0:5:49.88:75,0,50	0/0:23,0:5:9.50:0,10,159	0/1:19,1:18:48.01:48,0,237	0/1:38,1:17:15.67:16,0,470	0/1:17,2:13:54.28:57,0,54	0/0:16,0:13:9.28:0,9,84	0/1:19,1:11:42.90:43,0,238	0/1:18,3:18:34.59:35,0,98	0/1:22,3:18:99:175,0,121	0/0:10,0:7:19.37:0,19,309	1/1:5,1:2:2.22:7,2,0
chr10	102693828	.	AAAG	A	390.19	PASS	AB=0.976;AC=14;AF=0.250;AN=56;BaseQRankSum=3.968;DP=576;FS=6.039;HRun=0;HaplotypeScore=87.9305;InbreedingCoeff=-0.2226;MQ=29.85;MQ0=109;MQRankSum=-4.655;QD=1.44;ReadPosRankSum=2.478;VQSLOD=0.7785;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:25,1:17:73.13:73,0,105	0/0:12,0:9:20.98:0,21,380	0/0:13,0:2:5.98:0,6,91	0/0:28,0:3:1.49:0,1,57	0/0:23,0:16:32.99:0,33,648	0/1:13,1:9:66.19:66,0,100	0/1:20,0:12:26.49:51,0,26	0/0:35,0:9:18.77:0,19,158	0/1:22,0:19:27.17:27,0,72	0/0:36,0:26:46.35:0,46,1347	0/0:17,0:15:30.02:0,30,542	0/0:22,0:12:20.93:0,21,376	0/1:20,0:11:41.50:41,0,55	1/1:16,0:8:3.34:27,3,0	0/1:12,1:9:25.60:32,0,26	0/0:21,0:15:18.06:0,18,365	0/0:14,0:8:5.94:0,6,42	0/1:15,1:5:10.99:65,0,11	0/0:25,0:5:11.95:0,12,135	0/0:21,0:19:4.21:0,4,292	0/1:39,0:17:1.08:1,0,422	0/1:20,0:13:14.95:53,0,15	0/1:16,1:14:6.54:7,0,57	0/0:21,0:11:1.93:0,2,129	0/1:22,0:19:48.88:49,0,72	0/1:26,0:19:41.68:42,0,289	0/0:10,0:7:18.03:0,18,267	0/0:7,0:2:2.80:0,3,13
chr10	102693830	.	AGAG	A	631.64	PASS	AB=0.840;AC=17;AF=0.315;AN=54;BaseQRankSum=3.836;DP=612;FS=22.410;HRun=0;HaplotypeScore=89.8395;InbreedingCoeff=0.1262;MQ=29.29;MQ0=113;MQRankSum=-5.130;QD=2.26;ReadPosRankSum=2.420;VQSLOD=-0.3634;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,9:18:99:117,0,103	0/0:12,0:9:20.95:0,21,322	0/0:12,0:2:3.01:0,3,60	0/0:28,0:3:3.01:0,3,49	0/0:23,0:16:30.09:0,30,563	0/1:14,5:13:74.66:75,0,103	0/1:17,4:12:5.86:110,0,6	0/0:35,0:9:5.91:0,6,60	0/1:21,2:19:8.54:9,0,18	0/0:38,0:28:68.72:0,69,1254	0/0:18,0:16:30.05:0,30,500	0/0:25,0:14:24.08:0,24,453	1/1:16,5:12:6.84:84,7,0	1/1:13,3:8:5.19:28,5,0	0/1:10,4:11:28.66:55,0,29	0/0:23,0:17:27.05:0,27,487	./.	1/1:17,2:6:8.59:69,9,0	0/0:26,0:5:6.02:0,6,105	0/0:21,0:18:21.05:0,21,307	0/0:38,0:17:14.87:0,15,373	1/1:16,6:15:8.15:84,8,0	0/1:12,7:15:5.92:28,0,6	0/1:21,0:11:9.12:9,0,58	0/1:18,8:23:90.35:97,0,90	0/1:29,0:21:28.22:28,0,306	0/0:9,0:6:15.03:0,15,219	0/0:6,0:2:3:0,3,29
chr10	102693845	.	AGAG	A	63.48	PASS	AB=0.966;AC=8;AF=0.160;AN=50;BaseQRankSum=5.045;DP=806;FS=6.726;HRun=0;HaplotypeScore=106.1259;InbreedingCoeff=-0.0622;MQ=25.72;MQ0=175;MQRankSum=-4.719;QD=0.31;ReadPosRankSum=2.116;VQSLOD=1.6280;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,1:19:11.65:12,0,188	0/0:15,0:12:30.09:0,30,456	./.	./.	0/0:26,0:19:29.93:0,30,414	0/0:23,0:13:9.51:0,10,278	0/1:24,1:12:24.68:25,0,28	0/0:42,0:6:5.92:0,6,39	0/0:30,1:20:19.94:0,20,217	0/0:49,0:34:74.91:0,75,1305	0/0:29,0:26:30.04:0,30,457	0/0:42,0:25:36.12:0,36,670	0/0:25,0:11:3.27:0,3,77	0/1:20,1:11:35.96:36,0,39	0/1:21,1:14:10.80:11,0,171	0/0:39,0:31:52.42:0,52,955	./.	1/1:22,1:6:1.43:17,1,0	0/0:40,0:5:11.97:0,12,163	0/0:28,0:21:33.63:0,34,419	0/0:52,0:23:22.26:0,22,339	0/1:32,1:26:51.09:51,0,157	0/0:27,0:20:21:0,21,248	0/0:28,0:10:6.91:0,7,172	0/1:41,1:37:35.42:35,0,258	0/0:42,0:29:45.02:0,45,629	0/0:13,0:5:6.49:0,6,100	0/0:10,0:4:0.17:0,0,40
chr10	102693860	.	AGAG	A	109.35	PASS	AB=0.979;AC=10;AF=0.200;AN=50;BaseQRankSum=6.299;DP=821;FS=1.872;HRun=0;HaplotypeScore=123.0859;InbreedingCoeff=-0.0737;MQ=25.95;MQ0=178;MQRankSum=-2.051;QD=0.39;ReadPosRankSum=1.503;VQSLOD=2.5870;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:40,4:23:71.47:71,0,246	0/0:19,0:16:36.02:0,36,493	./.	./.	0/0:31,0:25:29.95:0,30,387	0/0:21,2:13:2.18:0,2,224	0/1:27,0:12:9.82:10,0,34	0/0:44,0:5:6.02:0,6,90	0/0:32,1:21:12.04:0,12,204	0/0:58,1:43:48.55:0,49,1499	0/0:29,0:26:36.07:0,36,592	0/0:41,0:25:30.10:0,30,588	0/1:23,0:9:7.14:7,0,65	0/1:19,0:10:0.90:1,0,44	0/1:22,1:15:17.69:18,0,181	0/0:43,0:34:58.32:0,58,1058	./.	1/1:21,0:5:5.83:33,6,0	0/1:41,0:6:29.49:29,0,134	0/0:31,0:24:27.86:0,28,344	0/0:45,0:17:12.51:0,13,189	0/0:34,3:29:8.87:0,9,340	0/0:25,1:19:29.72:0,30,340	0/0:34,0:15:17.13:0,17,198	0/1:40,0:35:23.67:24,0,408	0/1:43,2:32:45.16:45,0,599	0/0:13,0:4:3.48:0,3,51	0/0:14,0:6:4.20:0,4,61
chr10	102693872	.	GGAA	G	131.75	PASS	AB=0.971;AC=9;AF=0.173;AN=52;BaseQRankSum=4.792;DP=752;FS=0.823;HRun=0;HaplotypeScore=118.6859;InbreedingCoeff=-0.0460;MQ=25.76;MQ0=168;MQRankSum=-5.094;QD=0.57;ReadPosRankSum=0.183;VQSLOD=2.3803;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:44,2:25:42.57:43,0,276	0/0:19,0:15:33.05:0,33,472	./.	./.	0/0:26,0:20:28.06:0,28,467	0/1:20,1:11:1.90:2,0,182	0/0:25,0:10:7.82:0,8,50	0/0:41,0:2:6.02:0,6,129	0/0:28,1:17:11.99:0,12,156	0/0:59,0:45:38.83:0,39,1684	0/0:27,0:24:38.65:0,39,657	0/0:40,0:26:35.81:0,36,681	0/0:20,0:7:5.77:0,6,41	0/1:16,0:7:8.20:8,0,34	0/1:20,0:11:11.45:11,0,144	0/0:44,0:37:62.32:0,62,1208	0/0:14,0:7:2.97:0,3,20	1/1:19,0:4:5.93:54,6,0	0/1:32,0:4:8.59:9,0,141	0/0:31,0:23:47.60:0,48,511	0/0:38,0:14:12.04:0,12,204	0/0:31,1:24:5.15:0,5,249	0/0:21,0:15:18.58:0,19,231	0/0:29,1:15:2.29:0,2,140	0/1:34,2:32:58.92:59,0,303	0/1:40,3:30:70.97:71,0,538	0/0:12,0:4:6.46:0,6,65	0/0:11,0:6:4.81:0,5,85
chr10	102693884	.	GGAA	G	158.95	PASS	AB=0.980;AC=10;AF=0.192;AN=52;BaseQRankSum=3.391;DP=649;FS=1.536;HRun=0;HaplotypeScore=107.3706;InbreedingCoeff=-0.0818;MQ=26.29;MQ0=129;MQRankSum=-3.613;QD=0.78;ReadPosRankSum=-0.406;VQSLOD=1.5951;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:40,3:25:75.79:76,0,154	0/0:16,0:14:18.01:0,18,333	./.	./.	0/0:24,0:18:33.01:0,33,617	0/1:16,0:8:8.17:8,0,56	0/1:18,0:6:19.36:19,0,57	0/0:37,0:2:6.02:0,6,110	0/0:20,2:12:1.61:0,2,17	0/0:51,0:42:49.48:0,49,1928	0/0:26,0:23:39.07:0,39,784	0/0:41,0:28:35.99:0,36,760	1/1:13,1:5:6.86:70,7,0	0/1:14,0:7:14.06:14,0,26	0/1:17,0:11:15.43:15,0,68	0/0:44,0:38:62.99:0,63,1343	0/0:11,1:6:2.97:0,3,20	0/0:21,0:4:2.40:0,2,10	0/0:20,0:3:8.96:0,9,126	0/0:22,0:16:39.08:0,39,655	0/0:32,0:13:13.05:0,13,89	0/1:25,0:18:19.56:20,0,38	0/0:15,0:10:10.75:0,11,51	0/1:27,2:14:6.35:6,0,86	0/1:28,0:25:35.32:64,0,35	0/0:38,0:25:30.41:0,30,477	0/0:11,0:3:3.01:0,3,64	0/0:12,0:6:11.70:0,12,159
chr10	102693893	.	AGAG	A	433.42	PASS	AB=0.958;AC=19;AF=0.365;AN=52;BaseQRankSum=2.035;DP=605;FS=5.577;HRun=0;HaplotypeScore=95.1787;InbreedingCoeff=-0.1640;MQ=26.22;MQ0=119;MQRankSum=-2.398;QD=1.18;ReadPosRankSum=-1.476;VQSLOD=1.1031;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:35,2:23:35.12:35,0,235	0/0:12,0:10:12.04:0,12,256	./.	./.	0/0:21,0:17:27:0,27,502	0/1:15,0:8:9.36:44,0,9	0/1:16,1:6:6.26:6,0,97	0/1:38,0:3:11.96:12,0,86	1/1:18,0:8:2.97:20,3,0	0/0:51,0:40:29.63:0,30,1443	0/0:25,0:22:38.95:0,39,562	0/0:37,0:25:33.09:0,33,561	1/1:11,1:5:6.90:71,7,0	0/0:10,1:5:2.94:0,3,18	0/1:13,2:10:22.62:52,0,23	0/0:47,0:39:60.15:0,60,1116	0/0:10,0:5:3.01:0,3,53	1/1:17,0:2:2.22:7,2,0	0/1:24,0:3:12.18:12,0,42	0/1:21,0:16:41.20:41,0,235	0/1:29,0:13:26.60:79,0,27	0/1:21,1:16:2.32:2,0,21	0/1:10,2:9:21.05:25,0,21	0/1:30,1:16:31.18:31,0,75	0/1:22,3:21:43.58:142,0,44	0/1:33,0:22:0.30:0,0,352	0/0:11,0:3:3.01:0,3,64	0/0:12,0:5:8.70:0,9,110
chr10	102693940	.	AGGACCCCCAC	A	1760.26	PASS	AB=0.954;AC=29;AF=0.659;AN=44;BaseQRankSum=1.144;DP=219;FS=13.041;HRun=0;HaplotypeScore=66.1430;InbreedingCoeff=-0.0684;MQ=66.38;MQ0=16;MQRankSum=-2.759;QD=10.06;ReadPosRankSum=4.117;VQSLOD=0.3198;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:5:26.04:42,0,26	0/1:10,1:9:7.95:222,0,8	0/0:21,0:10:19.36:0,19,189	0/1:20,0:13:14.90:15,0,268	1/1:12,0:9:9.91:128,10,0	1/1:2,0:2:3.01:65,3,0	0/0:3,0:1:2.96:0,3,19	./.	./.	0/1:24,2:20:78.43:458,0,78	0/1:18,0:14:10.98:26,0,11	1/1:7,1:5:8.95:205,9,0	0/0:2,0:2:0:0,0,0	./.	1/1:2,0:1:0.89:2,1,0	0/1:27,1:22:9.77:205,0,10	1/1:4,0:3:3:28,3,0	1/1:2,0:1:3.01:66,3,0	./.	0/1:5,2:6:2.79:128,0,3	1/1:4,1:3:6.02:127,6,0	./.	0/1:3,0:3:0:0,0,0	1/1:8,0:4:5.69:86,6,0	./.	0/1:8,0:4:25.27:25,0,26	1/1:2,0:2:3.01:37,3,0	1/1:1,0:1:2.94:18,3,0
chr10	102693941	.	GGACCCCCACA	G	1892.92	PASS	AB=0.810;AC=36;AF=0.900;AN=40;BaseQRankSum=-1.494;DP=210;FS=7.417;HRun=0;HaplotypeScore=63.3492;InbreedingCoeff=0.1918;MQ=67.58;MQ0=15;MQRankSum=-2.351;QD=11.40;ReadPosRankSum=2.526;VQSLOD=0.6378;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:4:3.01:63,3,0	1/1:11,0:9:9.03:172,9,0	0/0:22,0:10:19.28:0,19,203	0/1:19,0:13:16.27:16,0,276	1/1:12,0:9:11.89:127,12,0	1/1:2,0:2:3.01:51,3,0	./.	./.	./.	1/1:26,0:20:33:501,33,0	1/1:16,0:13:3.01:50,3,0	1/1:7,0:5:9.02:175,9,0	0/1:1,1:2:0:0,0,0	./.	1/1:1,0:1:2.84:14,3,0	1/1:27,0:21:12.04:214,12,0	1/1:3,1:3:3.01:41,3,0	1/1:2,0:1:3.01:71,3,0	./.	1/1:6,0:6:8.39:138,8,0	1/1:4,1:3:6.02:164,6,0	./.	./.	1/1:5,2:4:5.69:103,6,0	./.	1/1:8,0:4:5.68:28,6,0	1/1:2,0:2:3.01:55,3,0	1/1:1,0:1:2.84:14,3,0
chr10	102693943	.	ACCCCCAC	A	2652.36	PASS	AB=1.000;AC=33;AF=0.917;AN=36;BaseQRankSum=-2.204;DP=160;FS=4.752;HRun=0;HaplotypeScore=52.1086;InbreedingCoeff=0.1562;MQ=76.24;MQ0=7;MQRankSum=-2.204;QD=19.94;ReadPosRankSum=2.772;VQSLOD=1.9191;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:2:3.01:63,3,0	1/1:1,9:8:9.03:246,9,0	0/1:23,0:10:6.85:7,0,159	0/0:19,0:13:8.09:0,8,269	1/1:4,6:8:11.91:220,12,0	1/1:0,1:1:3.01:80,3,0	./.	./.	./.	1/1:7,9:13:30.10:732,30,0	1/1:0,15:12:3.01:83,3,0	1/1:2,5:5:9.03:232,9,0	./.	./.	./.	1/1:2,22:18:12.04:304,12,0	1/1:2,1:2:3.01:80,3,0	1/1:1,1:1:3.01:59,3,0	./.	1/1:2,2:4:6.02:133,6,0	1/1:2,1:3:6.02:115,6,0	./.	./.	1/1:3,2:3:3.01:69,3,0	./.	1/1:0,3:2:6.02:166,6,0	1/1:0,1:1:3.01:83,3,0	1/1:0,1:1:3.01:83,3,0
chr10	102693957	.	A	AGAG	245.01	PASS	AB=0.994;AC=14;AF=0.318;AN=44;BaseQRankSum=0.829;DP=244;FS=1.188;HRun=0;HaplotypeScore=53.3831;InbreedingCoeff=-0.1068;MQ=55.68;MQ0=31;MQRankSum=-0.469;QD=2.19;ReadPosRankSum=-2.559;VQSLOD=0.7696;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:10,0:8:7.88:0,8,50	0/1:18,0:9:10.96:11,0,40	0/1:18,0:10:3.01:3,0,66	0/0:8,1:7:5.99:0,6,58	0/1:5,0:5:26.97:27,0,29	1/1:5,0:4:6.01:65,6,0	./.	./.	0/1:20,1:17:99:138,0,178	0/0:15,0:12:3.01:0,3,46	0/0:12,0:8:9.02:0,9,89	0/0:4,0:3:2.97:0,3,20	0/0:4,0:3:2.97:0,3,20	0/1:5,0:3:14.62:33,0,15	0/0:30,0:22:11.95:0,12,156	./.	0/0:3,1:3:5.75:0,6,46	0/0:9,0:2:3:0,3,25	0/1:7,0:7:21.32:21,0,77	0/1:14,0:7:11.16:11,0,13	./.	./.	1/1:9,0:5:0.92:3,1,0	1/1:2,1:2:3.01:31,3,0	0/0:6,0:2:6.02:0,6,91	0/1:5,0:3:26.71:27,0,40	0/0:1,0:1:3.01:0,3,46
chr10	102694126	.	GGAA	G	83.16	PASS	AB=0.944;AC=5;AF=0.089;AN=56;BaseQRankSum=7.165;DP=743;FS=19.088;HRun=0;HaplotypeScore=132.8999;InbreedingCoeff=0.2334;MQ=34.29;MQ0=78;MQRankSum=-4.839;QD=1.24;ReadPosRankSum=0.956;VQSLOD=1.4987;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:34:71.89:0,72,1410	0/0:10,0:9:26.84:0,27,336	0/0:20,0:4:12.04:0,12,214	0/0:26,0:10:17:0,17,483	0/0:23,0:20:39.12:0,39,843	0/0:19,0:17:14.20:0,14,572	0/0:41,0:28:47.64:0,48,803	0/0:51,0:23:38.30:0,38,806	0/0:15,0:13:21.07:0,21,427	0/0:42,1:33:89.39:0,89,1694	0/0:17,0:15:27.47:0,27,452	0/0:41,0:28:33.11:0,33,593	0/0:20,0:16:26.28:0,26,411	0/0:14,0:11:18.01:0,18,342	0/0:26,1:26:34.75:0,35,802	0/1:31,0:23:13.39:13,0,546	0/0:23,0:18:22.18:0,22,590	0/0:19,0:16:23.69:0,24,554	0/0:32,0:15:29.95:0,30,493	0/0:28,0:21:29.11:0,29,474	0/0:43,0:31:81.18:0,81,1541	0/0:34,0:28:48.70:0,49,970	0/0:31,0:30:38.78:0,39,694	0/0:26,0:17:18.05:0,18,328	0/0:29,0:29:17.76:0,18,723	0/1:12,3:10:76.54:116,0,77	0/1:11,0:10:28.11:28,0,331	1/1:8,2:7:4.36:38,4,0
chr10	102694177	.	G	GGGA	116.32	PASS	AB=0.882;AC=3;AF=0.054;AN=56;BaseQRankSum=6.396;DP=832;FS=28.989;HRun=0;HaplotypeScore=143.5808;InbreedingCoeff=0.4069;MQ=43.76;MQ0=47;MQRankSum=-4.561;QD=5.06;ReadPosRankSum=-1.044;VQSLOD=1.3064;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:54:99:0,109,2500	0/0:12,0:11:24.07:0,24,332	0/0:38,0:13:28.81:0,29,448	0/0:44,0:14:32.76:0,33,492	0/0:33,0:30:81.28:0,81,1428	0/0:24,0:21:14.53:0,15,605	0/0:40,0:32:66.22:0,66,1131	0/0:39,0:25:66.18:0,66,1084	0/0:13,0:13:18.06:0,18,317	0/0:55,0:49:84.74:0,85,1988	0/0:24,1:24:6.27:0,6,772	0/0:35,1:27:56.19:0,56,875	0/0:21,0:19:36.08:0,36,583	0/0:15,0:14:30.03:0,30,459	0/0:33,0:33:84.19:0,84,1361	0/0:28,1:22:44.84:0,45,702	0/0:27,0:25:53.44:0,53,999	0/0:19,0:17:35.99:0,36,586	0/0:31,0:19:42.14:0,42,685	0/0:35,0:31:8.80:0,9,848	0/0:50,0:44:99:0,123,2096	0/0:23,0:21:45.09:0,45,756	0/0:22,1:20:28.34:0,28,485	0/0:40,0:32:45:0,45,761	0/0:29,0:29:35.41:0,35,931	0/1:13,2:13:99:137,0,193	0/0:18,0:18:34.19:0,34,533	1/1:7,1:5:2.99:71,3,0
chr10	102696026	.	AGAGG	A	810.10	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=6.365;DP=478;FS=7.664;HRun=0;HaplotypeScore=78.9142;InbreedingCoeff=0.7626;MQ=78.13;MQ0=1;MQRankSum=0.995;QD=15.88;ReadPosRankSum=1.675;VQSLOD=2.1272;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:65.44:0,65,1538	0/0:8,0:8:21.06:0,21,471	0/0:24,0:19:27.87:0,28,521	0/1:25,0:21:6.78:7,0,166	0/0:22,0:22:57.13:0,57,1192	0/0:26,0:25:57.15:0,57,1347	0/0:21,0:21:45.14:0,45,1049	0/0:18,0:19:27:0,27,509	0/0:19,0:19:48.04:0,48,1068	0/0:24,0:24:57.19:0,57,1302	0/0:14,0:14:33.09:0,33,753	0/0:21,0:21:51.13:0,51,1164	0/0:16,0:16:30.10:0,30,691	0/0:11,0:11:30.09:0,30,643	0/0:18,0:18:42.14:0,42,972	0/0:16,0:16:39.13:0,39,958	0/0:13,0:13:27.09:0,27,645	0/0:11,0:11:24.08:0,24,562	0/0:11,0:11:6.02:0,6,130	0/0:13,0:13:30.09:0,30,661	0/0:12,0:12:24.07:0,24,518	0/0:17,0:17:30.09:0,30,694	0/0:12,0:12:27.09:0,27,658	0/0:16,0:16:36.07:0,36,787	0/0:23,0:23:42.14:0,42,1016	1/1:6,15:21:45.11:676,45,0	0/0:11,0:11:29.97:0,30,644	1/1:1,4:5:15.05:251,15,0
chr10	102696962	.	TGA	T	835.25	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.176;DP=551;FS=3.904;HRun=0;HaplotypeScore=67.4933;InbreedingCoeff=0.9904;MQ=85.75;MQ0=1;MQRankSum=-1.919;QD=33.41;ReadPosRankSum=0.339;VQSLOD=5.2270;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,1751	0/0:6,0:6:18.06:0,18,312	0/0:24,0:23:54.05:0,54,799	0/0:23,0:23:33.55:0,34,774	0/0:7,0:7:18.06:0,18,307	0/0:19,0:19:57.18:0,57,952	0/0:23,0:23:66.23:0,66,1142	0/0:31,0:31:75.25:0,75,1264	0/0:14,0:14:39.13:0,39,676	0/0:23,0:23:60.21:0,60,1032	0/0:12,0:12:36.12:0,36,623	0/0:20,0:20:60.21:0,60,1039	0/0:12,0:12:36.12:0,36,616	0/0:21,0:21:63.20:0,63,1064	0/0:22,0:22:66.21:0,66,1116	0/0:15,0:15:42.14:0,42,719	0/0:28,0:28:78.27:0,78,1351	0/0:31,0:31:90.31:0,90,1558	0/0:22,0:22:57.19:0,57,958	0/0:17,0:17:45.15:0,45,775	0/0:22,0:22:57.20:0,57,979	0/0:16,0:16:42.14:0,42,727	0/0:20,0:20:51.16:0,51,854	0/0:24,0:24:63.22:0,63,1080	0/0:20,0:20:54.18:0,54,935	1/1:2,15:17:48.16:637,48,0	0/0:17,0:17:45.15:0,45,779	1/1:0,8:8:24.08:320,24,0
chr10	102697354	.	T	TTTTG	1731.99	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.926;DP=647;FS=1.475;HRun=0;HaplotypeScore=137.6142;InbreedingCoeff=0.9883;MQ=67.16;MQ0=6;MQRankSum=-1.096;QD=48.11;ReadPosRankSum=1.291;VQSLOD=4.6162;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:83.35:0,83,1289	0/0:12,0:12:28.45:0,28,444	0/0:36,0:25:30.14:0,30,512	0/0:41,0:25:24:0,24,322	0/0:16,0:16:30.10:0,30,484	0/0:27,0:26:45.15:0,45,741	0/0:14,0:13:29.84:0,30,454	0/0:35,0:35:27.28:0,27,748	0/0:18,0:17:42.09:0,42,629	0/0:28,0:28:69.24:0,69,1140	0/0:11,0:11:24.08:0,24,376	0/0:20,0:20:45.10:0,45,647	0/0:13,0:13:23.29:0,23,394	0/0:15,0:15:21.06:0,21,325	0/0:23,0:23:51.17:0,51,820	0/0:17,0:17:48.16:0,48,796	0/0:39,0:38:78.18:0,78,1207	0/0:40,0:40:82.15:0,82,1307	0/0:22,0:22:48.08:0,48,657	0/0:16,0:16:33.11:0,33,542	0/0:16,0:16:33.10:0,33,497	0/0:15,0:15:39.12:0,39,616	0/0:19,0:18:36.03:0,36,514	0/0:26,0:26:45.97:0,46,638	0/0:28,0:28:57.14:0,57,891	1/1:14,13:27:67.47:1520,67,0	0/0:21,0:21:54.17:0,54,872	1/1:6,3:9:18.02:332,18,0
chr10	102697402	.	G	GTT	9793.83	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=12.866;DP=736;FS=0.340;HRun=9;HaplotypeScore=112.3198;InbreedingCoeff=0.9782;MQ=55.86;MQ0=22;MQRankSum=1.085;QD=25.98;ReadPosRankSum=4.422;VQSLOD=4.3364;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,28:35:64.79:921,65,0	0/0:11,0:11:27.03:0,27,274	0/0:47,0:13:24.02:0,24,242	0/0:62,0:16:15.73:0,16,115	0/0:17,0:18:43.73:0,44,476	1/1:5,19:23:30.10:457,30,0	1/1:2,19:20:42.14:646,42,0	0/0:38,0:37:65.96:0,66,695	1/1:5,9:14:32.59:452,33,0	0/0:32,0:32:78.12:0,78,823	0/0:13,0:13:33.08:0,33,351	0/0:27,0:28:63.05:0,63,708	1/1:1,18:20:44.64:656,45,0	1/1:1,24:26:50.62:720,51,0	1/1:4,20:25:54.14:788,54,0	0/0:20,0:20:54.11:0,54,564	1/1:15,17:32:65.36:918,65,0	1/1:8,31:42:64.01:1255,64,0	0/0:20,0:17:45.11:0,45,479	0/0:20,0:20:57.14:0,57,606	0/0:18,0:18:52:0,52,535	1/1:5,13:18:39.13:585,39,0	1/1:5,14:23:39.35:495,39,0	1/1:5,26:31:57.11:814,57,0	1/1:2,15:20:32.59:453,33,0	1/1:12,3:33:11.30:576,11,0	0/0:31,0:31:66.80:0,67,899	1/1:3,0:9:6.01:57,6,0
chr10	102698183	.	G	GA	243.61	PASS	AB=0.814;AC=9;AF=0.173;AN=52;BaseQRankSum=3.087;DP=164;FS=76.261;HRun=0;HaplotypeScore=35.2292;InbreedingCoeff=-0.2280;MQ=76.49;MQ0=2;MQRankSum=-4.354;QD=3.75;ReadPosRankSum=-0.282;VQSLOD=0.3385;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,2:10:19.25:0,19,197	./.	0/0:9,0:6:4.86:0,5,62	0/0:13,0:9:19.55:0,20,183	0/0:2,1:3:0.24:0,0,22	0/0:2,0:2:6.02:0,6,83	0/1:8,1:9:0.32:0,0,166	0/1:10,3:12:99:110,0,241	0/0:5,0:6:3.95:0,4,43	0/1:5,2:7:64.54:65,0,136	0/0:5,0:5:9.01:0,9,107	0/0:8,0:8:14.13:0,14,134	0/0:6,0:6:12.04:0,12,162	0/0:3,1:4:6.49:0,6,84	0/0:2,0:2:6.02:0,6,83	0/0:3,0:3:9.03:0,9,114	0/1:6,1:7:26.36:26,0,189	0/0:1,0:1:3.01:0,3,42	0/1:9,2:10:52.43:52,0,144	0/1:5,2:7:9.85:10,0,69	0/0:3,3:6:0.47:0,0,1	0/0:7,0:7:5.97:0,6,61	0/0:4,0:4:12.02:0,12,136	0/0:9,0:9:17.99:0,18,193	0/1:2,1:3:32.48:54,0,32	0/1:2,1:3:28.15:28,0,75	0/1:4,1:5:22.05:22,0,87	./.
chr10	102699171	.	TG	T	12659.45	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=14.611;DP=722;FS=0.563;HRun=2;HaplotypeScore=68.3081;InbreedingCoeff=0.9988;MQ=90.13;MQ0=0;MQRankSum=-5.248;QD=35.46;ReadPosRankSum=5.344;VQSLOD=5.0801;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,43:44:99:1597,123,0	0/0:10,0:10:30.10:0,30,449	0/0:27,0:27:81.24:0,81,1165	0/0:27,0:27:78.23:0,78,1129	0/0:26,0:26:75.24:0,75,1103	1/1:0,28:28:78.25:1013,78,0	1/1:0,36:36:96.31:1247,96,0	0/0:21,0:21:63.21:0,63,944	1/1:0,23:23:60.20:779,60,0	0/0:36,0:36:99:0,102,1528	0/0:21,0:21:63.20:0,63,923	0/0:21,0:21:63.17:0,63,896	1/1:0,24:24:69.22:896,69,0	1/1:0,28:28:78.25:1013,78,0	1/1:1,29:30:84.27:1091,84,0	0/0:24,0:24:72.24:0,72,1061	1/1:0,23:23:60.20:779,60,0	1/1:0,21:21:54.18:701,54,0	0/0:30,0:30:84.28:0,84,1257	0/0:22,0:22:66.22:0,66,980	0/0:23,0:23:66.21:0,66,969	1/1:0,23:23:63.20:818,63,0	1/1:0,28:28:75.24:974,75,0	1/1:0,28:28:84.27:1091,84,0	1/1:1,20:21:51.17:662,51,0	0/0:40,0:40:99:0,117,1736	0/0:31,0:31:93.31:0,93,1388	0/0:6,0:6:18.06:0,18,266
chr10	102700481	.	C	CA	4006.80	PASS	AB=0.856;AC=20;AF=0.357;AN=56;BaseQRankSum=13.723;DP=1151;FS=240.480;HRun=1;HaplotypeScore=388.1229;InbreedingCoeff=-0.5710;MQ=36.53;MQ0=39;MQRankSum=-13.520;QD=4.63;ReadPosRankSum=3.853;VQSLOD=-0.7420;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,3:31:8.84:0,9,636	0/1:9,6:16:99:129,0,145	0/0:63,1:4:11.89:0,12,122	0/0:54,0:8:19.74:0,20,214	0/1:28,8:35:99:165,0,447	0/1:19,3:22:94.85:95,0,489	0/1:38,3:39:99:256,0,395	0/1:47,3:42:99:104,0,828	0/0:41,0:44:32.18:0,32,1031	0/1:52,19:59:99:866,0,777	0/1:23,9:29:73.84:74,0,183	0/1:45,6:52:99:217,0,1005	0/1:46,5:51:99:290,0,952	0/1:40,2:40:9.66:10,0,775	0/1:22,7:27:85.25:85,0,424	0/1:29,2:31:99:136,0,600	0/0:23,0:23:15.31:0,15,536	0/0:15,0:15:36.12:0,36,486	0/1:34,0:19:17.07:17,0,413	0/1:26,5:31:75.49:75,0,580	0/1:83,3:85:31.01:31,0,1686	0/1:35,11:44:99:265,0,646	0/1:21,15:36:99:159,0,290	0/0:40,2:41:27.20:0,27,573	0/1:46,9:53:99:288,0,533	0/1:59,13:68:99:519,0,1133	0/1:19,5:22:99:226,0,304	0/0:9,0:9:4.67:0,5,233
chr10	102700803	.	T	TCACA	4364.17	PASS	AB=0.988;AC=31;AF=0.554;AN=56;BaseQRankSum=1.541;DP=676;FS=1.545;HRun=0;HaplotypeScore=149.6043;InbreedingCoeff=0.5248;MQ=50.46;MQ0=25;MQRankSum=0.794;QD=10.75;ReadPosRankSum=0.848;VQSLOD=4.5539;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,1:32:29.51:326,30,0	0/0:4,0:4:3.01:0,3,42	0/0:62,0:14:8.98:0,9,80	0/0:59,0:22:11.22:0,11,79	0/0:15,0:14:21.03:0,21,334	1/1:10,0:10:8.99:116,9,0	1/1:30,0:29:42.06:481,42,0	0/0:35,0:32:45.01:0,45,517	1/1:22,2:24:30.04:420,30,0	0/0:21,0:21:49.86:0,50,706	0/0:12,0:11:12.04:0,12,194	0/0:21,0:21:45.11:0,45,673	1/1:18,1:19:29.41:349,29,0	1/1:27,0:27:24.06:358,24,0	1/1:14,1:16:29.05:319,29,0	0/0:27,0:27:54.02:0,54,767	1/1:27,1:31:41.88:406,42,0	1/1:18,1:21:31.76:498,32,0	0/1:24,0:20:69.52:70,0,88	0/0:11,0:10:3.48:0,3,30	0/1:53,0:50:63.59:64,0,278	1/1:16,1:18:6.37:77,6,0	1/1:6,0:6:6.02:67,6,0	1/1:27,1:28:32.62:451,33,0	1/1:11,0:10:6.01:71,6,0	0/1:32,0:32:99:226,0,103	0/1:14,0:15:48.90:49,0,225	0/1:5,0:5:16.40:16,0,19
chr10	102700820	.	C	CGCAT	1784.90	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=4.005;DP=666;FS=25.469;HRun=0;HaplotypeScore=170.1386;InbreedingCoeff=-0.0487;MQ=46.04;MQ0=17;MQRankSum=-1.539;QD=4.03;ReadPosRankSum=1.754;VQSLOD=0.7712;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:7.17:0,7,96	0/0:2,0:2:3.01:0,3,48	0/0:36,0:5:5.88:0,6,36	0/1:39,0:9:1.67:2,0,48	0/0:12,0:11:27.08:0,27,437	1/1:16,0:16:3.46:50,3,0	0/1:34,0:32:30.29:30,0,110	0/1:32,0:28:30.98:192,0,31	0/1:24,0:24:25.16:79,0,25	0/0:28,0:28:84.17:0,84,1205	0/0:9,0:9:15.05:0,15,250	0/0:25,0:25:63.58:0,64,948	0/1:19,0:19:47.07:53,0,47	0/1:25,0:25:20.69:54,0,21	0/1:24,0:24:7.15:7,0,77	0/0:26,0:25:63.07:0,63,961	0/1:30,0:30:30.52:31,0,95	0/1:25,0:27:99:120,0,172	1/1:22,2:21:28.96:370,29,0	1/1:10,0:10:1.21:45,1,0	1/1:47,1:46:11.65:410,12,0	0/0:21,0:21:1.95:0,2,66	0/0:12,0:10:7.50:0,8,54	0/1:32,0:32:33.39:33,0,33	0/0:17,0:16:6.12:0,6,30	0/1:36,0:35:99:180,0,140	1/1:18,1:19:2.86:283,3,0	0/1:3,0:3:9.51:10,0,24
chr10	102700829	.	G	GCACACA	6817.83	PASS	AB=0.845;AC=39;AF=0.722;AN=54;BaseQRankSum=0.990;DP=721;FS=0.509;HRun=0;HaplotypeScore=184.9624;InbreedingCoeff=0.5789;MQ=46.99;MQ0=14;MQRankSum=-1.956;QD=11.92;ReadPosRankSum=-2.577;VQSLOD=3.4627;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,14:41:2.54:0,3,21	./.	1/1:26,0:6:2.87:15,3,0	0/1:36,0:9:4.96:5,0,79	0/0:15,0:14:26.77:0,27,507	1/1:1,11:17:8.70:206,9,0	1/1:19,17:39:14.78:246,15,0	1/1:35,0:32:39.63:447,40,0	1/1:8,11:25:12.04:348,12,0	0/0:24,0:30:53.50:0,53,816	0/0:8,0:8:12.04:0,12,219	0/0:18,0:23:45.15:0,45,807	1/1:15,10:27:15.44:239,15,0	0/1:10,15:30:44.39:248,0,44	1/1:25,0:28:25.51:355,26,0	0/0:24,0:28:51.12:0,51,835	1/1:15,8:30:24.30:450,24,0	0/1:29,2:31:39.40:930,0,39	1/1:23,1:23:22.03:425,22,0	1/1:2,8:11:2.88:15,3,0	1/1:51,0:51:66.33:849,66,0	1/1:24,1:25:12.03:192,12,0	1/1:14,0:12:4.43:102,4,0	1/1:31,2:33:20.86:390,21,0	1/1:15,0:16:6.76:50,7,0	1/1:15,9:42:33.77:800,34,0	1/1:19,0:20:14.69:460,15,0	1/1:4,0:3:5.98:47,6,0
chr10	102701371	.	CT	C	13591.80	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=11.529;DP=662;FS=0.287;HRun=1;HaplotypeScore=68.5278;InbreedingCoeff=0.9845;MQ=84.94;MQ0=0;MQRankSum=-1.901;QD=38.07;ReadPosRankSum=5.948;VQSLOD=4.9295;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,47:48:99:1873,135,0	0/0:6,0:6:18.06:0,18,287	0/0:20,0:20:59.76:0,60,891	0/0:19,0:19:51.08:0,51,720	0/0:27,0:27:81.25:0,81,1242	1/1:0,24:24:72.24:1006,72,0	1/1:0,41:41:99:1468,105,0	0/0:27,0:27:81.24:0,81,1227	1/1:0,25:25:69.23:965,69,0	0/0:17,0:17:51.11:0,51,731	0/0:14,0:14:42.14:0,42,671	0/0:30,0:30:90.31:0,90,1437	1/1:0,26:26:66.22:922,66,0	1/1:0,27:27:72.24:1004,72,0	1/1:0,26:26:69.23:964,69,0	0/0:25,0:25:72.23:0,72,1126	1/1:0,37:37:99:1461,105,0	1/1:0,14:14:39.13:545,39,0	0/0:21,0:21:60.19:0,60,920	0/0:16,0:16:48.16:0,48,767	0/0:36,0:36:99:0,105,1627	1/1:0,27:27:78.26:1087,78,0	1/1:0,12:12:30.10:420,30,0	1/1:0,30:30:81.27:1127,81,0	1/1:0,20:20:54.18:750,54,0	0/0:22,0:22:63.21:0,63,1004	0/0:23,0:23:69.24:0,69,1103	0/0:2,0:2:6.02:0,6,96
chr10	102702858	.	TA	T	1380.40	PASS	AB=0.909;AC=11;AF=0.204;AN=54;BaseQRankSum=5.810;DP=245;FS=2.049;HRun=8;HaplotypeScore=28.8056;InbreedingCoeff=0.7005;MQ=70.48;MQ0=1;MQRankSum=0.028;QD=18.41;ReadPosRankSum=-1.294;VQSLOD=2.3705;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:12.04:0,12,145	./.	0/1:9,1:7:14.18:14,0,83	0/0:9,0:5:7.26:0,7,73	0/0:13,0:13:36.10:0,36,421	0/0:10,0:10:24.07:0,24,290	0/0:3,0:3:6.02:0,6,70	1/1:3,24:26:72.11:695,72,0	0/0:5,0:5:15.05:0,15,178	0/0:7,0:7:18.06:0,18,217	0/0:4,0:4:12.04:0,12,141	0/0:3,0:3:3.01:0,3,36	0/0:6,0:6:18.06:0,18,217	0/0:4,0:4:12.04:0,12,145	0/0:2,0:2:3.01:0,3,35	0/0:8,0:8:21.06:0,21,251	0/0:19,0:19:52.04:0,52,617	0/0:22,0:22:63.19:0,63,759	1/1:2,12:14:36.06:348,36,0	1/1:0,9:9:24.04:232,24,0	1/1:0,4:4:9.01:87,9,0	0/0:2,0:2:6.02:0,6,71	0/0:3,0:3:8.99:0,9,92	0/0:2,0:2:5.96:0,6,44	0/0:8,0:8:18.06:0,18,217	0/0:15,0:15:42.13:0,42,505	1/1:4,7:11:18.02:174,18,0	0/0:20,0:20:60.17:0,60,713
chr10	102703460	.	AC	A	1200	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.150;DP=605;FS=0.656;HRun=2;HaplotypeScore=58.4613;InbreedingCoeff=0.9975;MQ=80.38;MQ0=0;MQRankSum=-0.854;QD=33.33;ReadPosRankSum=0.919;VQSLOD=3.5847;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1838	0/0:8,0:8:24.08:0,24,355	0/0:20,0:20:57.17:0,57,799	0/0:15,0:15:39.04:0,39,521	0/0:18,0:18:51.17:0,51,756	0/0:24,0:24:69.23:0,69,1033	0/0:26,0:26:75.24:0,75,1101	0/0:15,0:15:45.15:0,45,674	0/0:16,0:16:48.16:0,48,718	0/0:26,0:26:75.25:0,75,1123	0/0:13,0:13:39.13:0,39,584	0/0:24,0:24:72.23:0,72,1057	0/0:26,0:26:75.25:0,75,1119	0/0:20,0:20:60.19:0,60,878	0/0:23,0:23:66.20:0,66,946	0/0:23,0:23:69.23:0,69,1034	0/0:32,0:32:96.32:0,96,1431	0/0:34,0:34:99:0,102,1524	0/0:18,0:18:54.10:0,54,755	0/0:16,0:16:48.14:0,48,679	0/0:27,0:27:78.23:0,78,1123	0/0:17,0:17:51.17:0,51,759	0/0:20,0:20:57.19:0,57,851	0/0:28,0:28:84.28:0,84,1249	0/0:8,0:8:24.05:0,24,335	1/1:0,25:25:72.23:932,72,0	0/0:31,0:31:90.25:0,90,1296	1/1:0,11:11:30.10:390,30,0
chr10	102703725	.	GAA	G	941.45	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.539;DP=717;FS=7.852;HRun=10;HaplotypeScore=106.1043;InbreedingCoeff=0.9880;MQ=77.16;MQ0=0;MQRankSum=-0.811;QD=26.15;ReadPosRankSum=0.784;VQSLOD=3.0816;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,1:46:92.38:0,92,1801	0/0:15,0:15:39.13:0,39,618	0/0:29,1:25:31.99:0,32,525	0/0:28,0:26:18.80:0,19,379	0/0:19,0:21:59.17:0,59,874	0/0:26,0:26:69.24:0,69,1095	0/0:29,0:29:78.27:0,78,1235	0/0:25,0:25:56.92:0,57,844	0/0:15,0:15:39.13:0,39,601	0/0:22,0:22:60.20:0,60,932	0/0:21,0:21:63.21:0,63,994	0/0:24,0:24:63.21:0,63,998	0/0:15,0:17:41.11:0,41,589	0/0:21,0:21:54.17:0,54,830	0/0:23,0:23:66.23:0,66,1046	0/0:23,0:23:66.23:0,66,1045	0/0:43,0:43:99:0,117,1855	0/0:34,0:36:99:0,101,1541	0/0:24,0:26:59.16:0,59,853	0/0:30,0:31:86.78:0,87,1325	0/0:15,0:16:45.15:0,45,694	0/0:22,0:24:56.67:0,57,846	0/0:25,0:26:71.72:0,72,1082	0/0:40,0:41:99:0,117,1803	0/0:21,0:23:65.19:0,65,955	1/1:1,27:28:81.20:893,81,0	0/0:25,0:25:69.02:0,69,1040	1/1:3,5:8:15.04:167,15,0
chr10	102704211	.	TC	T	1060.81	PASS	AB=0.540;AC=3;AF=0.054;AN=56;BaseQRankSum=10.054;DP=752;FS=0.631;HRun=1;HaplotypeScore=86.8998;InbreedingCoeff=0.7387;MQ=79.30;MQ0=0;MQRankSum=-10.013;QD=24.67;ReadPosRankSum=2.812;VQSLOD=3.7201;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,169,2626	0/0:18,0:18:51.17:0,51,811	0/0:20,0:20:57.18:0,57,841	0/0:17,0:17:51.12:0,51,664	0/0:23,0:23:69.24:0,69,1097	0/0:17,0:17:51.16:0,51,791	0/0:30,0:30:90.29:0,90,1412	0/0:40,0:40:99:0,117,1845	0/0:40,0:40:99:0,120,1867	0/0:35,0:35:96.31:0,96,1494	0/0:14,0:14:42.14:0,42,670	0/0:31,0:31:90.27:0,90,1387	0/0:23,0:23:69.17:0,69,1002	0/0:21,0:21:63.21:0,63,1004	0/0:41,0:41:99:0,123,1819	0/0:32,0:32:96.33:0,96,1533	0/0:28,0:28:84.29:0,84,1341	0/0:24,0:24:72.25:0,72,1149	0/0:24,0:24:69.21:0,69,1057	0/0:18,0:18:51.15:0,51,759	0/0:26,0:26:78.27:0,78,1246	0/0:22,0:22:54.14:0,54,813	0/0:23,0:23:63.20:0,63,979	0/0:34,0:34:99:0,99,1547	0/0:23,0:23:69.17:0,69,1071	0/1:5,29:34:5.67:887,0,6	0/0:28,0:28:84.26:0,84,1306	1/1:1,8:9:24.07:280,24,0
chr10	102704221	.	CT	C	1306.21	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.289;DP=724;FS=1.313;HRun=2;HaplotypeScore=85.1346;InbreedingCoeff=0.9987;MQ=76.10;MQ0=0;MQRankSum=-10.285;QD=31.10;ReadPosRankSum=1.221;VQSLOD=3.3925;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,159,2280	0/0:17,0:17:48.16:0,48,714	0/0:12,0:12:33.11:0,33,476	0/0:18,0:18:47.62:0,48,595	0/0:25,0:24:72.24:0,72,1061	0/0:16,0:16:48.16:0,48,719	0/0:29,0:29:81.21:0,81,1128	0/0:40,0:40:99:0,108,1600	0/0:35,0:35:99:0,105,1574	0/0:27,0:27:81.26:0,81,1181	0/0:14,0:14:42.12:0,42,591	0/0:29,0:29:87.29:0,87,1304	0/0:23,0:23:69.23:0,69,1020	0/0:21,0:21:63.21:0,63,944	0/0:38,0:38:99:0,114,1688	0/0:32,0:32:96.32:0,96,1419	0/0:28,0:28:84.20:0,84,1211	0/0:27,0:27:75.22:0,75,1082	0/0:24,0:24:69.22:0,69,1005	0/0:13,0:13:36.12:0,36,530	0/0:27,0:27:81.27:0,81,1196	0/0:19,0:19:48.14:0,48,680	0/0:24,0:24:66.18:0,66,954	0/0:37,0:37:99:0,99,1456	0/0:28,0:28:78.24:0,78,1129	1/1:3,31:34:48.32:1116,48,0	0/0:26,0:26:75.24:0,75,1095	1/1:0,8:8:24.08:311,24,0
chr10	102704411	.	C	CT	1219.35	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.132;DP=689;FS=0.663;HRun=4;HaplotypeScore=68.8442;InbreedingCoeff=0.9682;MQ=82.16;MQ0=0;MQRankSum=-4.681;QD=33.87;ReadPosRankSum=-0.298;VQSLOD=3.9821;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,132,1450	0/0:13,0:13:39.11:0,39,442	0/0:18,0:18:42.10:0,42,465	0/0:23,0:23:48.07:0,48,515	0/0:23,0:23:66.18:0,66,739	0/0:20,0:20:60.09:0,60,653	0/0:29,0:29:75.11:0,75,815	0/0:26,0:26:69.18:0,69,769	0/0:23,0:23:66.11:0,66,722	0/0:30,0:30:87.25:0,87,986	0/0:8,0:8:24.07:0,24,272	0/0:24,0:25:65.17:0,65,691	0/0:24,0:24:72.19:0,72,806	0/0:26,0:26:72.18:0,72,805	0/0:37,0:37:99:0,105,1190	0/0:38,0:38:99:0,102,1130	0/0:31,0:31:90.19:0,90,978	0/0:15,0:15:42.12:0,42,476	0/0:21,0:21:54.15:0,54,612	0/0:18,0:18:51.14:0,51,578	0/0:39,0:39:99:0,105,1179	0/0:17,0:17:45.12:0,45,501	0/0:16,0:16:45.11:0,45,500	0/0:33,0:33:93.23:0,93,1034	0/0:25,0:25:66.14:0,66,725	1/1:1,32:33:90.28:1211,90,0	0/0:25,0:25:75.20:0,75,840	1/1:0,3:3:9.03:123,9,0
chr10	102704525	.	G	GTC	771.51	PASS	AB=0.676;AC=3;AF=0.054;AN=56;BaseQRankSum=0.409;DP=828;FS=2.659;HRun=0;HaplotypeScore=148.7086;InbreedingCoeff=0.6320;MQ=51.11;MQ0=26;MQRankSum=-2.892;QD=27.55;ReadPosRankSum=-0.118;VQSLOD=4.9220;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:78.19:0,78,1113	0/0:15,0:15:42.02:0,42,506	0/0:89,0:21:49.12:0,49,547	0/0:68,0:13:25.17:0,25,288	0/0:29,0:27:75.08:0,75,1000	0/0:27,0:27:60.02:0,60,809	0/0:35,0:35:78.13:0,78,1111	0/0:21,0:21:57.09:0,57,709	0/0:19,0:19:35.08:0,35,494	0/0:40,0:40:99:0,117,1502	0/0:21,0:21:57.06:0,57,731	0/0:23,0:23:63.03:0,63,797	0/0:18,0:18:36.12:0,36,546	0/0:20,0:20:51.08:0,51,706	0/0:27,0:27:57.18:0,57,843	0/0:16,0:16:25.46:0,25,552	0/0:35,0:35:80.75:0,81,1007	0/0:27,0:27:60.04:0,60,783	0/0:15,0:14:36.01:0,36,404	0/0:25,0:25:66.09:0,66,848	0/0:58,0:58:99:0,117,1655	0/0:22,0:22:45.11:0,45,660	0/0:23,0:23:42.10:0,42,612	0/0:37,0:37:74.87:0,75,980	0/0:18,0:18:26.68:0,27,359	0/1:12,11:23:29.55:617,0,30	0/0:27,0:26:81.18:0,81,1116	1/1:0,5:5:15.05:256,15,0
chr10	102704547	.	A	ATGTGTG	5892.19	PASS	AB=0.781;AC=31;AF=0.554;AN=56;BaseQRankSum=2.337;DP=857;FS=3.534;HRun=0;HaplotypeScore=189.0791;InbreedingCoeff=0.6862;MQ=47.33;MQ0=33;MQRankSum=-8.744;QD=12.05;ReadPosRankSum=-3.072;VQSLOD=3.8649;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,18:41:10.80:331,11,0	0/0:11,0:14:36.23:0,36,577	1/1:82,0:12:2.04:6,2,0	0/0:80,0:11:17.29:0,17,206	0/0:28,0:27:51.15:0,51,988	1/1:5,13:22:21.07:585,21,0	1/1:19,14:41:26.16:521,26,0	0/0:29,0:28:37.54:0,38,674	1/1:8,8:17:8.82:239,9,0	0/0:36,0:38:44.78:0,45,999	0/0:17,0:18:28.81:0,29,510	0/0:22,0:25:5.72:0,6,627	1/1:11,11:23:24.08:737,24,0	1/1:7,8:17:5.11:195,5,0	1/1:12,10:25:18.02:452,18,0	0/0:18,0:18:36.12:0,36,712	0/1:15,0:32:55.39:102,0,55	0/1:16,10:29:18.69:559,0,19	0/1:12,0:11:24.74:25,0,233	0/0:26,0:26:57.17:0,57,1089	0/0:59,0:63:99:0,99,1815	1/1:8,14:25:7.51:292,8,0	1/1:10,11:26:15.02:344,15,0	1/1:19,16:40:18.02:343,18,0	1/1:7,11:20:11.99:315,12,0	1/1:30,0:30:47.39:693,47,0	0/0:25,0:24:63.20:0,63,1229	1/1:6,0:6:9.03:153,9,0
chr10	102704580	.	T	TGTGC	1003.89	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.262;DP=769;FS=16.000;HRun=0;HaplotypeScore=182.6956;InbreedingCoeff=0.9667;MQ=63.64;MQ0=6;MQRankSum=-5.958;QD=33.46;ReadPosRankSum=2.158;VQSLOD=2.8315;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:36.34:0,36,549	0/0:16,0:16:42.08:0,42,757	0/0:39,0:17:44.45:0,44,771	0/0:50,0:27:56.91:0,57,939	0/0:19,0:19:51.16:0,51,919	0/0:21,0:21:30.06:0,30,409	0/0:44,0:44:86.75:0,87,1409	0/0:26,0:25:71.98:0,72,1058	0/0:22,0:22:51.09:0,51,829	0/0:30,0:30:78.25:0,78,1385	0/0:17,0:17:45.13:0,45,788	0/0:25,0:25:34.26:0,34,1080	0/0:23,0:23:45.81:0,46,666	0/0:22,0:21:23.86:0,24,399	0/0:27,0:27:54.02:0,54,880	0/0:18,0:18:51.16:0,51,934	0/0:29,0:29:69.15:0,69,1115	0/0:34,0:34:77.65:0,78,1132	0/0:13,0:13:37.34:0,37,604	0/0:27,0:27:74.45:0,74,1296	0/0:71,0:70:99:0,162,2959	0/0:25,0:25:36:0,36,566	0/0:21,0:21:29.91:0,30,447	0/0:38,0:38:44.20:0,44,759	0/0:19,0:19:26.65:0,27,386	1/1:13,11:27:57.41:925,57,0	0/0:29,0:29:84.25:0,84,1503	1/1:0,2:3:9.03:193,9,0
chr10	102708508	.	AC	A	10894.16	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=8.348;DP=678;FS=6.514;HRun=3;HaplotypeScore=73.4318;InbreedingCoeff=0.9999;MQ=82.08;MQ0=0;MQRankSum=-2.108;QD=32.04;ReadPosRankSum=4.434;VQSLOD=5.0278;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,61:64:99:2045,166,0	0/0:17,0:17:48.16:0,48,690	0/0:21,0:21:56.80:0,57,727	0/0:15,0:15:41.99:0,42,494	0/0:26,0:26:78.25:0,78,1103	1/1:0,15:15:42.13:521,42,0	1/1:0,23:23:60.19:743,60,0	0/0:24,0:24:63.19:0,63,874	1/1:2,19:21:51.16:632,51,0	0/0:26,0:26:75.25:0,75,1079	0/0:13,0:13:36.12:0,36,516	0/0:29,0:29:84.28:0,84,1208	1/1:1,26:27:63.20:780,63,0	1/1:2,18:20:51.16:632,51,0	1/1:1,31:32:81.25:1004,81,0	0/0:19,0:19:51.14:0,51,698	1/1:0,32:32:84.26:1041,84,0	1/1:0,17:17:51.16:632,51,0	0/0:20,0:20:54.17:0,54,759	0/0:20,0:20:60.19:0,60,843	0/0:43,0:44:99:0,126,1776	1/1:0,22:22:57.18:706,57,0	1/1:0,16:16:42.13:520,42,0	1/1:0,31:31:84.26:1041,84,0	1/1:2,18:20:48.15:595,48,0	0/0:18,0:18:51.16:0,51,716	0/0:31,0:31:93.30:0,93,1321	0/0:15,0:15:36.12:0,36,517
chr10	102709841	.	T	TGTG	1315.41	PASS	AB=0.837;AC=16;AF=0.333;AN=48;BaseQRankSum=0.469;DP=208;FS=0.000;HRun=0;HaplotypeScore=46.3559;InbreedingCoeff=0.4705;MQ=94.75;MQ0=1;MQRankSum=-4.135;QD=21.92;ReadPosRankSum=0.829;VQSLOD=3.1884;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:10:19.48:0,19,150	./.	0/0:14,0:11:26.40:0,26,344	0/0:21,0:18:29.38:0,29,363	0/0:12,0:12:36.07:0,36,485	1/1:0,6:6:15.05:340,15,0	1/1:0,13:13:30.10:679,30,0	0/0:10,0:10:30.08:0,30,436	./.	0/0:6,0:6:18:0,18,252	0/0:5,0:5:12.03:0,12,184	0/0:11,0:11:30.10:0,30,525	0/1:4,0:4:21.37:21,0,65	1/1:1,0:4:3.01:39,3,0	0/1:1,0:4:17.61:72,0,18	0/0:8,0:8:24.07:0,24,395	0/1:5,0:7:30.12:104,0,30	1/1:3,0:3:3:25,3,0	0/0:2,0:2:6.02:0,6,105	0/0:3,0:3:8.88:0,9,93	0/0:22,0:22:60.13:0,60,884	./.	./.	0/0:6,0:11:8.89:0,9,68	0/1:4,0:4:16.83:24,0,17	1/1:14,0:14:33.05:168,33,0	0/0:8,0:8:24.07:0,24,385	1/1:1,0:1:2.04:6,2,0
chr10	102709842	.	G	GT	692.78	PASS	AB=1.000;AC=11;AF=0.229;AN=48;BaseQRankSum=4.860;DP=206;FS=0.739;HRun=1;HaplotypeScore=40.6765;InbreedingCoeff=0.6630;MQ=94.92;MQ0=1;MQRankSum=-3.453;QD=16.90;ReadPosRankSum=1.522;VQSLOD=3.7964;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:23.97:0,24,202	./.	0/0:13,0:10:26.22:0,26,267	0/0:25,0:19:29.22:0,29,308	0/0:12,0:12:36.08:0,36,442	1/1:6,0:6:14.78:94,15,0	1/1:11,0:11:29.53:188,30,0	0/0:10,0:10:30.08:0,30,371	./.	0/0:6,0:6:18:0,18,218	0/0:6,0:6:12.04:0,12,157	0/0:10,0:10:30.10:0,30,417	0/1:4,0:4:1.67:2,0,65	1/1:4,0:4:2.67:11,3,0	0/0:4,0:4:4.14:0,4,33	0/0:8,0:8:24.07:0,24,319	0/0:7,0:7:4.78:0,5,81	0/0:3,0:3:0.89:0,1,2	0/0:2,0:2:6.02:0,6,84	0/0:3,0:3:8.90:0,9,98	0/0:22,0:22:63.11:0,63,761	./.	./.	0/0:11,0:11:11.88:0,12,89	0/0:3,0:3:1.57:0,2,21	1/1:0,14:14:42.06:502,42,0	0/0:8,0:8:24.07:0,24,314	1/1:0,2:2:3.01:41,3,0
chr10	102710027	.	G	GGT	1455.45	PASS	AB=0.853;AC=17;AF=0.304;AN=56;BaseQRankSum=9.405;DP=362;FS=81.025;HRun=0;HaplotypeScore=100.8195;InbreedingCoeff=-0.4329;MQ=64.74;MQ0=2;MQRankSum=-7.670;QD=7.39;ReadPosRankSum=-1.804;VQSLOD=-0.6159;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.26:0,42,684	0/1:3,1:4:45.76:46,0,126	0/0:25,0:16:37.83:0,38,524	0/0:41,0:29:39.30:0,39,791	0/1:12,6:18:99:249,0,297	0/1:7,1:8:99:184,0,160	0/1:12,1:13:18.52:19,0,504	0/1:20,5:25:99:217,0,772	0/1:10,2:12:79.35:79,0,422	0/1:4,5:9:67.33:313,0,67	0/1:6,2:8:91.36:91,0,251	0/1:17,2:19:61.32:61,0,649	0/1:10,1:11:27.69:28,0,376	0/0:12,0:12:34:0,34,506	0/1:7,1:8:33.61:34,0,288	0/0:9,0:9:27.09:0,27,413	0/0:13,0:13:39.13:0,39,597	0/0:16,0:16:45.15:0,45,684	0/1:11,0:11:80.69:81,0,364	0/1:8,1:9:36.73:37,0,253	0/0:12,0:12:24.08:0,24,367	0/1:5,1:6:44.19:44,0,160	0/0:2,0:2:3.01:0,3,46	0/1:20,1:21:0.67:1,0,717	0/1:2,2:4:78.43:103,0,78	0/0:14,0:14:42.14:0,42,641	0/1:10,1:11:24.63:25,0,426	0/0:4,0:4:12.04:0,12,184
chr10	102710608	.	AGAG	A	861.09	PASS	AB=0.864;AC=23;AF=0.426;AN=54;BaseQRankSum=5.057;DP=217;FS=47.472;HRun=0;HaplotypeScore=32.1173;InbreedingCoeff=-0.3182;MQ=35.74;MQ0=29;MQRankSum=-5.987;QD=4.81;ReadPosRankSum=2.795;VQSLOD=0.7603;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,1:7:36.60:37,0,180	0/1:1,2:3:30.81:58,0,31	1/1:35,0:1:2.74:12,3,0	0/1:21,1:4:28.36:36,0,28	0/0:4,0:3:3:0,3,51	0/1:6,0:6:5.26:5,0,186	0/0:5,0:4:6.02:0,6,117	0/0:5,0:3:9.03:0,9,157	1/1:0,1:1:3:29,3,0	0/1:6,4:8:93.39:93,0,161	0/0:5,0:5:9.03:0,9,190	0/1:5,4:9:99:133,0,215	0/0:2,0:2:0:0,0,0	0/1:4,0:3:10.36:10,0,56	1/1:2,1:3:3.01:46,3,0	0/1:6,7:13:99:237,0,237	./.	0/0:3,0:2:5.23:0,5,64	0/1:14,1:12:22.07:22,0,398	0/0:8,0:7:17.94:0,18,253	0/1:6,0:5:30.04:30,0,185	0/1:8,5:12:99:135,0,140	1/1:5,1:5:2.97:20,3,0	0/0:6,0:5:6.02:0,6,124	0/1:3,1:4:32.42:32,0,54	0/1:9,0:9:19.36:33,0,19	0/1:8,0:8:18.58:19,0,289	0/1:4,0:4:15.76:24,0,16
chr10	102712029	.	T	TGA	1383.48	PASS	AB=0.755;AC=4;AF=0.071;AN=56;BaseQRankSum=0.155;DP=619;FS=1.467;HRun=0;HaplotypeScore=90.8609;InbreedingCoeff=0.5201;MQ=75.30;MQ0=0;MQRankSum=-2.620;QD=22.68;ReadPosRankSum=0.634;VQSLOD=3.7680;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,99,1350	0/0:10,0:10:24.08:0,24,336	0/1:25,0:21:2.45:2,0,535	0/0:14,0:13:33.41:0,33,378	0/0:15,0:15:45.15:0,45,630	0/0:19,0:19:51.15:0,51,696	0/0:29,0:29:84.28:0,84,1174	0/0:29,0:29:75.24:0,75,1033	0/0:22,0:21:48.14:0,48,653	0/0:27,0:27:75.25:0,75,1050	0/0:15,0:15:42.14:0,42,588	0/0:15,0:15:27.09:0,27,378	0/0:23,0:23:54.18:0,54,755	0/0:17,0:17:33.11:0,33,462	0/0:26,0:25:63.18:0,63,845	0/0:24,0:24:63.21:0,63,881	0/0:27,0:27:66.22:0,66,923	0/0:13,0:13:33.09:0,33,443	0/0:25,0:25:60.19:0,60,824	0/0:18,0:18:51.17:0,51,714	0/0:33,0:33:90.24:0,90,1205	0/0:19,0:19:54.17:0,54,739	0/0:13,0:13:27.09:0,27,378	0/0:45,0:45:99:0,114,1572	0/0:19,0:19:42.14:0,42,587	0/1:4,19:23:20.86:896,0,21	0/0:14,0:14:42.11:0,42,553	1/1:1,11:12:33.11:593,33,0
chr10	102712042	.	CA	C	2246.75	PASS	AB=0.798;AC=29;AF=0.518;AN=56;BaseQRankSum=3.099;DP=679;FS=9.631;HRun=15;HaplotypeScore=103.4599;InbreedingCoeff=0.2349;MQ=69.90;MQ0=1;MQRankSum=4.103;QD=4.67;ReadPosRankSum=6.763;VQSLOD=1.2596;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,37:53:22.83:316,0,23	0/1:8,2:10:23.55:24,0,62	0/1:25,0:17:6.87:7,0,35	0/1:16,1:14:21.93:22,0,44	0/0:17,1:18:16.41:0,16,240	1/1:10,10:21:28.45:179,28,0	1/1:9,7:21:33.66:180,34,0	0/0:28,2:31:17.05:0,17,277	1/1:7,13:20:19.62:120,20,0	0/1:27,2:32:16.71:17,0,223	0/0:16,0:18:34.92:0,35,306	0/0:18,4:22:16.41:0,16,237	1/1:11,9:21:19.56:120,20,0	1/1:10,10:20:18.74:117,19,0	0/1:9,12:23:15.93:132,0,16	0/1:18,3:23:57.28:57,0,114	1/1:3,22:29:55.38:331,55,0	1/1:4,8:13:5.05:136,5,0	0/1:28,3:31:23.43:23,0,262	0/1:17,4:21:5.81:6,0,184	0/0:27,0:29:43.75:0,44,371	1/1:6,12:18:26.52:173,27,0	0/1:8,6:17:51.34:51,0,52	1/1:17,23:44:41.44:331,41,0	0/1:9,11:21:3.69:98,0,4	0/0:33,0:31:64.75:0,65,368	0/0:19,2:20:9.32:0,9,309	0/0:26,0:20:39.54:0,40,224
chr10	102712349	.	T	TG	2341.66	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.324;DP=691;FS=0.000;HRun=0;HaplotypeScore=63.5423;InbreedingCoeff=0.9958;MQ=89.20;MQ0=0;MQRankSum=-5.520;QD=43.36;ReadPosRankSum=2.489;VQSLOD=4.2037;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1538	0/0:6,0:6:18.06:0,18,252	0/0:28,0:28:84.09:0,84,1095	0/0:24,0:24:69.19:0,69,934	0/0:16,0:16:48.16:0,48,671	0/0:21,0:21:60.18:0,60,821	0/0:41,0:41:99:0,120,1628	0/0:38,0:38:99:0,114,1539	0/0:33,0:33:96.31:0,96,1327	0/0:25,0:25:75.25:0,75,1045	0/0:14,0:14:42.13:0,42,572	0/0:20,0:20:60.16:0,60,785	0/0:32,0:32:90.27:0,90,1223	0/0:20,0:20:57.18:0,57,776	0/0:28,0:28:81.26:0,81,1111	0/0:26,0:25:75.23:0,75,1029	0/0:31,0:31:93.29:0,93,1280	0/0:24,0:24:66.22:0,66,919	0/0:22,0:22:63.15:0,63,840	0/0:16,0:16:48.15:0,48,654	0/0:29,0:29:87.26:0,87,1193	0/0:17,0:17:51.16:0,51,698	0/0:17,0:17:48.13:0,48,651	0/0:28,0:28:84.28:0,84,1174	0/0:20,0:20:60.19:0,60,823	1/1:0,26:26:75.24:1171,75,0	0/0:22,0:22:66.22:0,66,919	1/1:1,27:28:81.28:1293,81,0
chr10	102713105	.	G	GTCTC	1537.64	PASS	AB=0.913;AC=30;AF=0.652;AN=46;BaseQRankSum=-1.212;DP=596;FS=2.489;HRun=0;HaplotypeScore=121.8491;InbreedingCoeff=0.1357;MQ=61.07;MQ0=26;MQRankSum=-1.329;QD=3.49;ReadPosRankSum=-0.694;VQSLOD=2.1811;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:33:0.01:0,0,0	./.	./.	0/1:48,0:12:0:0,0,0	1/1:15,0:14:3.01:41,3,0	0/1:16,0:17:39.75:82,0,40	1/1:16,2:20:3.01:70,3,0	./.	1/1:11,4:17:8.77:152,9,0	0/0:10,0:10:3:0,3,28	./.	0/1:24,0:30:17.69:18,0,40	1/1:23,0:23:12.93:201,13,0	1/1:23,0:23:5.86:82,6,0	1/1:22,0:22:6.90:84,7,0	0/0:13,0:13:6.17:0,6,157	0/1:22,1:24:17.70:328,0,18	0/1:14,1:20:60.58:132,0,61	0/0:19,0:19:5.72:0,6,53	0/1:11,0:11:0:0,0,0	0/1:20,0:22:28.79:37,0,29	1/1:21,0:21:6.01:91,6,0	./.	1/1:26,6:35:6.49:141,6,0	1/1:18,0:18:6.02:118,6,0	1/1:28,0:28:8.98:73,9,0	0/0:13,0:13:3:0,3,46	1/1:10,0:10:2.96:19,3,0
chr10	102713109	.	C	CGAGAGAG	2500.26	PASS	AB=0.641;AC=3;AF=0.054;AN=56;BaseQRankSum=-3.495;DP=644;FS=2.751;HRun=0;HaplotypeScore=153.9708;InbreedingCoeff=0.5904;MQ=59.19;MQ0=31;MQRankSum=-7.049;QD=73.54;ReadPosRankSum=1.694;VQSLOD=4.2412;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:38:45.90:0,46,1282	0/0:6,0:6:12.04:0,12,334	0/0:36,0:15:34.14:0,34,704	0/0:48,0:12:32.71:0,33,807	0/0:19,0:17:42.10:0,42,905	0/0:20,0:20:48.15:0,48,1100	0/0:20,0:20:45.15:0,45,1194	0/0:42,0:41:99:0,116,2482	0/0:17,0:17:30.10:0,30,754	0/0:17,0:17:36.10:0,36,764	0/0:9,0:9:15.05:0,15,417	0/0:33,0:33:66.11:0,66,1521	0/0:23,0:23:39.16:0,39,878	0/0:21,0:21:39.07:0,39,1021	0/0:23,0:23:37.01:0,37,984	0/0:20,0:19:41.52:0,42,974	0/0:27,0:26:64:0,64,1456	0/0:21,0:20:48.16:0,48,1232	0/0:21,0:20:56.86:0,57,1278	0/0:11,0:11:24.02:0,24,469	0/0:27,0:27:57.20:0,57,1526	0/0:24,0:23:42.02:0,42,1047	0/0:8,0:6:9.03:0,9,250	0/0:37,0:37:49.56:0,50,1372	0/0:19,0:19:38.19:0,38,897	0/1:11,12:25:99:1870,0,102	0/0:20,0:20:43.92:0,44,917	1/1:2,5:8:16.31:733,16,0
chr10	102714680	.	CT	C	3149.73	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.052;DP=614;FS=9.170;HRun=5;HaplotypeScore=87.6789;InbreedingCoeff=0.9989;MQ=83.21;MQ0=0;MQRankSum=-0.992;QD=29.44;ReadPosRankSum=-1.640;VQSLOD=2.8691;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1627	0/0:9,0:9:21.07:0,21,287	0/0:17,0:17:37:0,37,480	0/0:17,0:17:38.96:0,39,490	0/0:14,0:14:39.13:0,39,530	0/0:14,0:14:39.13:0,39,533	0/0:19,0:19:57.19:0,57,778	1/1:1,26:27:75.20:841,75,0	0/0:24,0:24:72.23:0,72,970	0/0:26,0:26:72.20:0,72,939	0/0:19,0:19:54.18:0,54,738	0/0:16,0:16:48.16:0,48,657	0/0:18,0:18:48.16:0,48,657	0/0:19,0:19:57.19:0,57,780	0/0:21,0:21:63.18:0,63,830	0/0:20,0:20:60.20:0,60,821	0/0:31,0:31:81.25:0,81,1091	0/0:20,0:20:60.20:0,60,820	1/1:0,16:16:48.14:545,48,0	1/1:1,23:24:66.19:748,66,0	1/1:1,27:28:75.21:851,75,0	0/0:30,0:30:87.29:0,87,1190	0/0:25,0:25:72.24:0,72,985	0/0:38,0:38:99:0,111,1516	0/0:26,0:26:78.26:0,78,1067	0/0:27,0:27:72.23:0,72,970	1/1:1,11:12:30.09:340,30,0	0/0:15,0:15:42.13:0,42,559
chr10	102715581	.	C	CTG	7407.24	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-15.651;DP=730;FS=11.110;HRun=0;HaplotypeScore=84.5427;InbreedingCoeff=0.9928;MQ=79.57;MQ0=0;MQRankSum=1.395;QD=51.44;ReadPosRankSum=-1.791;VQSLOD=4.4841;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,2067	0/0:12,0:12:36.12:0,36,550	0/0:20,0:20:57.17:0,57,832	0/0:17,0:17:45.15:0,45,678	0/0:18,0:18:54.14:0,54,762	0/0:36,0:36:99:0,108,1642	0/0:30,0:30:90.27:0,90,1332	1/1:5,36:42:99:2175,117,0	0/0:21,0:21:63.19:0,63,921	0/0:33,0:33:93.32:0,93,1424	0/0:23,0:23:69.23:0,69,1057	0/0:25,0:25:75.24:0,75,1127	0/0:33,0:33:99:0,99,1516	0/0:39,0:39:99:0,114,1721	0/0:29,0:29:87.30:0,87,1331	0/0:27,0:27:78.25:0,78,1174	0/0:33,0:33:99:0,99,1508	0/0:13,0:13:39.13:0,39,597	1/1:1,14:16:42.10:774,42,0	1/1:2,24:26:72.25:1391,72,0	1/1:2,29:31:75.26:1447,75,0	0/0:23,0:23:66.22:0,66,1010	0/0:16,0:16:42.13:0,42,622	0/0:30,0:30:90.29:0,90,1356	0/0:22,0:22:63.21:0,63,965	0/0:34,0:34:99:0,99,1478	1/1:0,29:29:84.29:1621,84,0	0/0:5,0:5:12.04:0,12,184
chr10	102715701	.	G	GTC	10002.95	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=9.514;DP=842;FS=18.064;HRun=0;HaplotypeScore=153.0504;InbreedingCoeff=0.9561;MQ=61.73;MQ0=11;MQRankSum=-1.983;QD=18.39;ReadPosRankSum=1.705;VQSLOD=4.0710;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,43:52:28.41:825,28,0	1/1:2,13:15:18.04:303,18,0	0/0:39,0:21:27.26:0,27,239	0/0:56,0:20:10.90:0,11,146	0/0:30,0:30:68.85:0,69,757	1/1:18,7:24:59.60:696,60,0	1/1:3,25:28:12.04:203,12,0	1/1:40,0:40:97.34:846,97,0	1/1:15,8:23:42.03:598,42,0	0/0:32,0:32:72.83:0,73,838	0/0:27,0:27:72:0,72,810	0/0:31,0:31:68.96:0,69,817	1/1:3,26:29:44.69:724,45,0	1/1:4,28:32:41.29:704,41,0	1/1:25,5:30:39.04:535,39,0	0/0:34,0:34:74.72:0,75,1077	1/1:15,13:28:55.71:876,56,0	1/1:2,19:22:21.06:331,21,0	1/1:17,1:18:44.49:386,44,0	1/1:19,0:19:11.71:132,12,0	1/1:24,0:24:14.96:145,15,0	1/1:7,19:26:23.77:404,24,0	1/1:5,12:17:4.09:283,4,0	1/1:6,54:61:62.15:1150,62,0	1/1:2,23:26:27.09:456,27,0	0/0:37,0:37:96.90:0,97,1059	1/1:27,2:29:50.27:405,50,0	0/0:11,0:11:29.99:0,30,297
chr10	102715708	.	TCA	T	146.42	PASS	AB=0.992;AC=12;AF=0.214;AN=56;BaseQRankSum=-0.330;DP=843;FS=0.000;HRun=0;HaplotypeScore=190.0535;InbreedingCoeff=0.1271;MQ=59.80;MQ0=10;MQRankSum=0.209;QD=0.55;ReadPosRankSum=-6.063;VQSLOD=0.6938;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:10.58:0,11,110	1/1:14,0:14:0.16:19,0,0	0/0:31,0:17:4.16:0,4,21	0/1:53,0:21:0.39:0,0,16	0/1:27,1:29:25.03:25,0,694	0/1:25,0:23:1.09:31,0,1	0/0:27,0:27:2.56:0,3,5	0/0:40,0:40:48.65:0,49,311	0/1:23,0:23:11.53:12,0,12	0/0:32,2:34:12.24:0,12,948	0/0:27,0:27:51.08:0,51,786	0/0:28,2:31:34.52:0,35,920	0/0:28,1:29:21.12:0,21,62	0/1:33,0:33:3.38:3,0,44	1/1:27,0:27:11.49:124,11,0	0/0:35,1:37:55.66:0,56,1217	0/0:29,0:29:3.95:0,4,55	0/1:26,0:25:26.99:47,0,27	0/1:20,0:20:10.25:10,0,115	0/0:25,0:25:7.05:0,7,52	0/0:22,0:22:0.89:0,1,2	0/0:25,0:25:7.14:0,7,15	0/1:16,0:16:9.53:10,0,49	0/0:62,0:62:4.84:0,5,52	0/0:25,0:25:5.63:0,6,16	0/0:37,0:37:72.15:0,72,985	0/0:29,0:29:20.81:0,21,270	0/0:12,0:12:18.04:0,18,256
chr10	102715733	.	C	CAT	1233.44	PASS	AB=0.966;AC=11;AF=0.196;AN=56;BaseQRankSum=11.280;DP=844;FS=15.514;HRun=0;HaplotypeScore=188.9910;InbreedingCoeff=0.1949;MQ=52.44;MQ0=7;MQRankSum=0.147;QD=4.89;ReadPosRankSum=1.183;VQSLOD=1.9473;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:12.79:0,13,361	0/1:13,0:13:1.02:1,0,37	0/0:23,0:11:23.87:0,24,206	0/0:40,0:16:16.65:0,17,218	0/0:30,0:30:51.65:0,52,984	0/0:20,0:18:13.66:0,14,118	0/0:33,0:33:39.15:0,39,335	0/1:32,0:32:99:235,0,158	0/1:25,0:25:14.87:15,0,170	0/0:36,0:36:73.94:0,74,1307	0/0:27,0:27:71.99:0,72,952	0/0:30,0:30:75.13:0,75,1037	0/1:33,0:33:47.12:47,0,176	0/1:35,0:35:33.07:33,0,113	0/0:32,0:32:33.07:0,33,297	0/0:38,0:38:52.28:0,52,1317	0/0:32,0:32:9.69:0,10,182	0/0:28,0:27:34.08:0,34,278	0/1:15,0:15:32.90:163,0,33	1/1:34,2:38:33.66:288,34,0	1/1:32,0:32:31.63:255,32,0	0/0:22,0:22:12.06:0,12,135	0/0:19,0:19:19.87:0,20,211	0/0:54,0:54:1.52:0,2,152	0/0:31,0:31:29.22:0,29,266	0/0:40,0:40:99:0,114,1389	0/1:22,3:28:55.96:351,0,56	0/0:12,0:12:33.47:0,33,366
chr10	102715837	.	A	ACACG	7058.95	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=1.317;DP=736;FS=6.811;HRun=0;HaplotypeScore=202.1396;InbreedingCoeff=0.9576;MQ=57.04;MQ0=4;MQRankSum=-8.300;QD=14.15;ReadPosRankSum=-3.485;VQSLOD=3.2632;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:20.30:150,20,0	1/1:16,0:16:11.78:91,12,0	0/0:25,0:23:54.09:0,54,735	0/0:32,0:22:47.83:0,48,635	0/0:18,0:18:48.05:0,48,715	1/1:24,0:22:29.29:326,29,0	1/1:37,0:36:33.27:251,33,0	1/1:16,15:34:50.66:755,51,0	1/1:24,0:24:23.79:256,24,0	0/0:27,0:27:66.21:0,66,1060	0/0:26,0:26:68.90:0,69,1026	0/0:27,0:27:69.21:0,69,1132	1/1:32,0:32:26.54:306,27,0	1/1:22,0:21:14.78:146,15,0	1/1:25,0:24:17.22:136,17,0	0/0:27,0:27:72.18:0,72,1128	1/1:29,0:28:35.60:335,36,0	1/1:20,0:20:35.38:245,35,0	1/1:6,12:20:41.80:624,42,0	1/1:5,11:15:21.07:528,21,0	1/1:15,33:48:59.60:1406,60,0	1/1:24,0:24:23.91:222,24,0	1/1:16,0:14:2.84:20,3,0	1/1:33,0:33:13.88:155,14,0	1/1:27,0:27:24.02:271,24,0	0/0:30,0:30:72.22:0,72,1172	1/1:5,18:23:33.11:836,33,0	0/0:25,0:25:63.15:0,63,972
chr10	102716223	.	AT	A	2238.04	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.015;DP=511;FS=7.796;HRun=10;HaplotypeScore=68.2535;InbreedingCoeff=0.9702;MQ=73.84;MQ0=1;MQRankSum=-0.332;QD=19.98;ReadPosRankSum=0.656;VQSLOD=4.5051;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,1:18:28.05:0,28,525	0/0:11,0:11:24.06:0,24,265	0/0:13,0:10:5.42:0,5,47	0/0:16,0:14:21.60:0,22,200	0/0:21,1:22:25.06:0,25,489	0/0:22,0:22:63.14:0,63,679	0/0:15,0:15:33.04:0,33,339	1/1:6,18:24:50.96:443,51,0	0/0:14,0:14:33.07:0,33,356	0/0:22,0:22:54.14:0,54,585	0/0:20,0:20:51.11:0,51,547	0/0:14,0:14:39.11:0,39,431	0/0:8,0:8:24.06:0,24,266	0/0:15,0:15:39.11:0,39,431	0/0:23,0:24:65.99:0,66,695	0/0:25,0:25:72.19:0,72,796	0/0:28,0:28:75.17:0,75,811	0/0:21,0:21:57.11:0,57,609	1/1:2,15:17:44.98:388,45,0	1/1:4,19:23:56.94:488,57,0	1/1:1,13:14:32.99:286,33,0	0/0:15,0:15:45.12:0,45,498	0/0:9,0:9:27.07:0,27,297	0/0:11,0:11:33.09:0,33,365	0/0:14,0:15:38.87:0,39,397	0/0:20,0:20:25.46:0,25,487	1/1:2,32:34:92.98:807,93,0	0/0:21,0:21:63.14:0,63,678
chr10	102717067	.	CACCCCCGTG	C	2611.71	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.391;DP=392;FS=7.013;HRun=0;HaplotypeScore=109.9215;InbreedingCoeff=0.9491;MQ=68.07;MQ0=0;MQRankSum=-8.583;QD=33.48;ReadPosRankSum=-1.189;VQSLOD=2.7041;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,4007	0/0:6,0:6:18.06:0,18,834	0/0:8,0:7:12.04:0,12,498	0/0:14,0:14:30.08:0,30,938	0/0:14,0:14:42.14:0,42,1940	0/0:11,0:11:33.11:0,33,1354	0/0:16,0:16:48.16:0,48,2098	1/1:6,8:14:21.07:631,21,0	0/0:15,0:15:39.13:0,39,1812	0/0:16,0:16:48.16:0,48,2144	0/0:6,0:6:11.63:0,12,453	0/0:21,0:21:60.21:0,60,2628	0/0:6,0:6:15.05:0,15,724	0/0:12,0:12:36.12:0,36,1633	0/0:10,0:10:24.08:0,24,986	0/0:14,0:14:39.12:0,39,1640	0/0:17,0:17:48.16:0,48,2232	0/0:27,0:27:81.28:0,81,3513	1/1:4,12:16:27.08:661,27,0	1/1:1,8:10:24.04:549,24,0	1/1:7,10:17:5.86:109,6,0	0/0:17,0:17:51.18:0,51,2264	0/0:9,0:9:24.07:0,24,942	0/0:12,0:12:36.12:0,36,1570	0/0:10,0:10:27.09:0,27,1159	0/0:13,0:13:36.12:0,36,1264	1/1:4,17:21:29.78:831,30,0	0/0:6,0:6:18.06:0,18,870
chr10	102717654	.	G	GT	4993	PASS	AB=0.774;AC=28;AF=0.500;AN=56;BaseQRankSum=-10.843;DP=548;FS=0.371;HRun=11;HaplotypeScore=69.6133;InbreedingCoeff=0.7542;MQ=72.43;MQ0=0;MQRankSum=0.990;QD=16.48;ReadPosRankSum=1.603;VQSLOD=5.6190;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:31:59.62:561,60,0	1/1:1,6:7:18.04:183,18,0	0/0:16,0:13:6.17:0,6,83	0/1:14,1:15:6:11,0,6	0/0:30,3:33:19.66:0,20,510	1/1:3,18:21:24.86:434,25,0	1/1:7,20:28:51.40:496,51,0	0/0:7,0:27:30.28:0,30,88	1/1:1,11:12:11.76:98,12,0	0/0:28,1:29:18.72:0,19,435	0/0:24,0:24:62.75:0,63,486	0/0:15,0:15:35.84:0,36,279	0/1:2,2:9:27.04:72,0,27	1/1:2,18:20:21.94:402,22,0	1/1:1,11:13:32.90:319,33,0	0/0:14,0:13:32.87:0,33,255	1/1:2,21:25:53.94:532,54,0	1/1:7,23:30:13.06:501,13,0	0/0:8,0:21:18.27:0,18,54	0/0:0,0:14:6.04:0,6,41	0/0:4,0:17:20.14:0,20,59	1/1:3,10:13:24.05:242,24,0	1/1:3,18:21:36.07:365,36,0	0/1:3,9:13:0.03:215,0,0	1/1:3,25:29:56.95:562,57,0	0/0:30,0:30:47.71:0,48,514	0/1:0,0:15:0.77:1,0,45	0/0:5,0:5:11.93:0,12,93
chr10	102717832	.	GC	G	2855.81	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.126;DP=603;FS=0.832;HRun=7;HaplotypeScore=70.5856;InbreedingCoeff=0.9989;MQ=82.13;MQ0=0;MQRankSum=-2.531;QD=25.50;ReadPosRankSum=-1.610;VQSLOD=3.5210;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.25:0,84,1036	0/0:7,0:7:21.07:0,21,263	0/0:19,0:19:51.02:0,51,601	0/0:23,1:23:50.71:0,51,570	0/0:13,0:13:39.11:0,39,477	0/0:16,0:16:48.11:0,48,585	0/0:25,0:25:60.17:0,60,730	1/1:0,23:23:60.05:585,60,0	0/0:24,0:24:69.22:0,69,867	0/0:28,0:28:78.21:0,78,935	0/0:20,0:20:60.18:0,60,741	0/0:17,0:17:48.15:0,48,604	0/0:22,0:22:66.20:0,66,818	0/0:15,0:15:39.12:0,39,491	0/0:20,0:20:54.14:0,54,654	0/0:24,0:24:69.22:0,69,867	0/0:31,0:31:90.29:0,90,1131	0/0:35,0:35:96.29:0,96,1195	1/1:2,15:17:45.10:459,45,0	1/1:0,14:14:39.09:398,39,0	1/1:1,30:31:84.19:857,84,0	0/0:15,0:15:39.12:0,39,490	0/0:16,0:16:48.15:0,48,600	0/0:30,0:29:84.26:0,84,1044	0/0:25,0:25:75.21:0,75,917	0/0:23,0:23:66.19:0,66,804	1/1:2,25:27:72.16:733,72,0	0/0:10,0:10:30.10:0,30,377
chr10	102717938	.	AAAACAAACAAAC	A	6200.06	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.557;DP=762;FS=18.704;HRun=0;HaplotypeScore=247.9309;InbreedingCoeff=0.9814;MQ=65.02;MQ0=4;MQRankSum=-8.206;QD=43.66;ReadPosRankSum=-0.747;VQSLOD=3.1070;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:93.28:0,93,4536	0/0:11,0:11:15.01:0,15,701	0/0:41,0:30:30.10:0,30,1365	0/0:30,0:22:30.09:0,30,1350	0/0:36,0:36:93.31:0,93,4892	0/0:19,0:19:48.16:0,48,2522	0/0:30,0:30:54.18:0,54,2813	1/1:10,19:29:54.07:931,54,0	0/0:25,0:25:63.18:0,63,3213	0/0:35,0:35:93.32:0,93,5278	0/0:19,0:19:57.20:0,57,3122	0/0:33,0:33:81.26:0,81,4114	0/0:23,0:23:66.23:0,66,3501	0/0:31,0:31:78.25:0,78,4031	0/0:33,0:33:69.24:0,69,3528	0/0:23,0:23:54.17:0,54,2778	0/0:28,0:27:78.25:0,78,4024	0/0:29,0:29:72.20:0,72,3470	1/1:12,13:23:39.06:963,39,0	1/1:5,22:27:57.07:1561,57,0	1/1:8,17:25:9.03:298,9,0	0/0:18,0:18:45.15:0,45,2474	0/0:16,0:16:42.14:0,42,2382	0/0:39,0:39:87.28:0,87,4786	0/0:22,0:22:51.17:0,51,2674	0/0:31,0:31:75.26:0,75,4077	1/1:3,33:36:72.20:2447,72,0	0/0:8,0:8:21.07:0,21,1095
chr10	102718560	.	T	TACAC	4489.16	PASS	AB=0.801;AC=28;AF=0.500;AN=56;BaseQRankSum=-3.339;DP=844;FS=2.861;HRun=0;HaplotypeScore=143.8421;InbreedingCoeff=0.6205;MQ=61.95;MQ0=20;MQRankSum=-2.447;QD=9.11;ReadPosRankSum=-4.536;VQSLOD=2.7740;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,32:51:18.95:434,19,0	1/1:1,7:9:11.78:229,12,0	0/0:40,0:18:0.45:0,0,1	0/0:38,0:23:5.75:0,6,43	0/0:19,0:20:23.96:0,24,348	1/1:4,15:22:9.40:201,9,0	1/1:18,19:42:19.86:263,20,0	1/1:47,0:47:9.12:106,9,0	1/1:13,18:33:18.25:555,18,0	0/0:29,0:26:30.84:0,31,606	0/0:20,0:20:29:0,29,469	0/0:32,0:32:27.13:0,27,610	1/1:8,1:21:11.62:123,12,0	1/1:11,16:28:17.74:307,18,0	0/1:15,15:31:55.44:70,0,55	0/1:24,0:23:6.80:7,0,484	0/1:10,16:31:76.89:429,0,77	0/1:18,0:19:42.60:179,0,43	0/0:25,0:25:14.24:0,14,174	0/0:17,0:17:17.37:0,17,124	0/0:54,0:53:22.90:0,23,150	1/1:9,9:22:5.45:25,5,0	1/1:6,16:26:8.67:153,9,0	1/1:15,24:44:58.12:974,58,0	1/1:15,23:41:25.04:435,25,0	0/0:34,0:35:20:0,20,780	0/0:23,0:22:8.84:0,9,108	0/0:18,0:15:17.98:0,18,192
chr10	102718588	.	CAT	C	1395.72	PASS	AB=0.906;AC=10;AF=0.179;AN=56;BaseQRankSum=5.829;DP=831;FS=6.806;HRun=0;HaplotypeScore=116.3007;InbreedingCoeff=0.3132;MQ=55.69;MQ0=26;MQRankSum=-0.544;QD=5.29;ReadPosRankSum=-2.644;VQSLOD=2.1415;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:7.51:0,8,437	0/0:12,0:12:14.64:0,15,136	0/0:42,0:12:9.44:0,9,111	0/1:53,0:17:11.14:11,0,131	0/0:13,0:13:30.05:0,30,475	0/0:22,0:22:0.62:0,1,153	0/0:36,0:36:6:0,6,382	0/1:43,0:42:35.04:426,0,35	0/1:32,0:32:11.34:11,0,362	0/0:27,0:24:57.13:0,57,798	0/0:17,0:17:15.19:0,15,496	0/0:35,0:35:37.27:0,37,997	0/0:16,0:16:13.42:0,13,116	0/0:28,0:27:7.90:0,8,331	0/0:30,0:30:12.39:0,12,383	0/0:23,0:22:27.23:0,27,677	0/0:34,0:33:32.73:0,33,486	0/1:19,0:19:35.92:36,0,270	0/1:16,2:18:0.61:267,0,1	0/1:3,18:21:4.09:229,0,4	1/1:12,45:56:25.44:367,25,0	0/0:17,0:17:23.68:0,24,178	0/0:28,0:28:27.73:0,28,240	0/0:44,0:44:65.63:0,66,793	0/0:37,0:37:15.05:0,15,314	0/0:40,0:40:48.33:0,48,1088	1/1:6,15:20:14.61:199,15,0	0/0:16,0:13:37.06:0,37,359
chr10	102718590	.	TACAC	T	1382.61	PASS	AB=0.737;AC=9;AF=0.161;AN=56;BaseQRankSum=5.886;DP=822;FS=2.645;HRun=0;HaplotypeScore=139.9054;InbreedingCoeff=0.8541;MQ=55.85;MQ0=24;MQRankSum=1.738;QD=8.70;ReadPosRankSum=0.407;VQSLOD=3.1760;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:66.16:0,66,1159	0/0:13,0:13:18.25:0,18,382	0/0:41,0:13:26.63:0,27,345	0/0:51,0:18:37.98:0,38,528	0/0:15,0:15:33.10:0,33,688	0/0:21,0:21:24.06:0,24,448	0/0:36,0:36:48.15:0,48,942	0/1:27,15:41:3.20:575,0,3	0/0:33,0:33:53.96:0,54,960	0/0:26,0:23:54.17:0,54,1106	0/0:18,0:18:45.13:0,45,855	0/0:33,0:34:72.02:0,72,1550	0/0:17,0:17:17.99:0,18,306	0/0:28,0:27:40.37:0,40,773	0/0:30,0:30:47.61:0,48,775	0/0:22,0:21:45.15:0,45,957	0/0:33,0:32:50.63:0,51,1051	0/0:19,0:19:46.35:0,46,705	1/1:8,12:20:38.92:456,39,0	1/1:20,0:21:2.50:109,3,0	1/1:55,1:55:22.59:244,23,0	0/0:18,0:18:27.08:0,27,370	0/0:28,0:28:29.93:0,30,535	0/0:44,0:44:87.29:0,87,1861	0/0:34,0:34:36.12:0,36,750	0/0:40,0:40:89.66:0,90,1732	1/1:19,1:19:17.59:152,18,0	0/0:17,0:15:30.01:0,30,503
chr10	102719758	.	AT	A	2066.16	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.885;DP=588;FS=0.444;HRun=8;HaplotypeScore=63.3868;InbreedingCoeff=0.9938;MQ=83.12;MQ0=4;MQRankSum=0.136;QD=21.30;ReadPosRankSum=0.435;VQSLOD=3.6029;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,102,1220	0/0:9,0:9:27.08:0,27,326	0/0:42,0:35:68.83:0,69,769	0/0:19,0:16:13:0,13,255	0/0:25,0:25:66.20:0,66,797	0/0:18,0:18:48.15:0,48,579	0/0:18,0:18:48.15:0,48,580	1/1:5,19:24:57.03:534,57,0	0/0:22,0:22:63.19:0,63,755	0/0:19,0:19:54.17:0,54,652	0/0:17,0:17:48.14:0,48,569	0/0:20,0:20:57.17:0,57,677	0/0:22,0:22:63.18:0,63,748	0/0:15,0:15:45.12:0,45,530	0/0:15,0:14:42.13:0,42,507	0/0:18,0:18:42.12:0,42,498	0/0:28,0:28:72.17:0,72,832	0/0:30,0:30:84.26:0,84,1013	1/1:3,17:20:51.08:492,51,0	1/1:2,10:12:30.05:288,30,0	1/1:1,22:23:57.09:550,57,0	0/0:18,0:18:48.15:0,48,577	0/0:16,0:16:36.11:0,36,435	0/0:22,0:22:60.17:0,60,712	0/0:15,0:15:45.13:0,45,535	0/0:24,0:23:66.19:0,66,786	1/1:1,17:18:39.06:377,39,0	0/0:17,0:17:51.16:0,51,615
chr10	102720108	.	G	GTGTA	319.50	PASS	AB=1.000;AC=3;AF=0.068;AN=44;BaseQRankSum=-2.635;DP=346;FS=0.000;HRun=0;HaplotypeScore=76.2758;InbreedingCoeff=0.2435;MQ=75.96;MQ0=1;MQRankSum=1.364;QD=6.26;ReadPosRankSum=0.163;VQSLOD=1.2678;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:5.74:0,6,36	0/0:3,0:3:3:0,3,28	0/0:24,0:19:3:0,3,25	0/0:17,0:15:2.99:0,3,24	0/0:15,0:15:15.02:0,15,189	0/0:15,0:15:12.01:0,12,110	./.	0/0:10,0:10:0:0,0,0	0/0:5,0:5:3:0,3,25	0/1:20,0:20:18.52:19,0,182	0/0:17,0:17:21.01:0,21,226	0/0:15,0:15:30:0,30,315	0/0:7,0:7:8.97:0,9,73	0/0:13,0:13:12.02:0,12,126	0/0:5,0:5:3:0,3,25	0/0:15,0:15:9:0,9,97	0/0:20,0:20:12.01:0,12,112	0/0:15,0:15:12.02:0,12,124	./.	./.	./.	0/0:6,0:6:3:0,3,25	./.	./.	0/0:12,0:12:5.87:0,6,54	0/0:17,0:17:18.05:0,18,263	0/0:4,0:4:2.97:0,3,20	1/1:21,10:31:21:399,21,0
chr10	102720132	.	ATG	A	584.82	PASS	AB=0.812;AC=23;AF=0.442;AN=52;BaseQRankSum=6.497;DP=249;FS=1.411;HRun=0;HaplotypeScore=51.4359;InbreedingCoeff=0.0616;MQ=50.06;MQ0=11;MQRankSum=-3.362;QD=4.79;ReadPosRankSum=0.594;VQSLOD=2.1190;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,1:14:70.25:90,0,70	1/1:0,0:2:2.92:17,3,0	0/0:14,0:6:18.04:0,18,252	0/0:18,0:7:21.07:0,21,331	0/0:9,0:9:21.05:0,21,343	0/1:5,2:11:54.03:54,0,107	1/1:6,0:6:8.94:73,9,0	0/1:14,1:13:37.46:37,0,176	0/1:3,0:3:33.86:44,0,34	0/0:15,0:15:45.13:0,45,771	0/0:13,0:13:36.12:0,36,647	0/0:12,0:12:36.12:0,36,677	0/1:3,2:5:49.71:50,0,68	0/1:7,3:10:47.03:47,0,109	1/1:3,0:3:8.99:76,9,0	0/0:10,0:10:27.98:0,28,474	0/1:3,1:14:25.19:70,0,25	0/1:10,4:15:53.32:53,0,194	0/1:2,0:1:0:0,0,0	./.	./.	0/1:4,0:4:34.40:40,0,34	1/1:3,0:3:3.47:26,3,0	1/1:3,0:3:4.24:27,4,0	0/1:4,4:9:25.21:25,0,71	0/0:14,0:14:39.09:0,39,655	1/1:1,0:1:2.97:20,3,0	0/0:20,0:20:39.11:0,39,559
chr10	102720136	.	ATGTATG	A	1556.68	PASS	AB=0.865;AC=24;AF=0.462;AN=52;BaseQRankSum=8.176;DP=231;FS=3.210;HRun=0;HaplotypeScore=59.1338;InbreedingCoeff=0.1003;MQ=48.83;MQ0=11;MQRankSum=-4.942;QD=13.90;ReadPosRankSum=1.081;VQSLOD=2.2518;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:11,1:12:19.08:116,0,19	1/1:2,0:2:3.01:53,3,0	0/0:11,0:4:11.96:0,12,119	0/0:16,0:5:12.02:0,12,179	0/0:7,0:7:21.05:0,21,471	0/1:11,2:12:50.50:197,0,50	1/1:3,0:3:2.91:24,3,0	0/1:16,0:13:40.34:72,0,40	0/1:2,0:2:13.69:44,0,14	0/0:16,0:16:39.97:0,40,836	0/0:13,0:13:36.09:0,36,702	0/0:13,0:13:39.13:0,39,833	0/1:4,2:6:5.88:136,0,6	0/1:5,3:8:34.22:176,0,34	1/1:2,0:2:6.01:75,6,0	0/0:11,0:11:24.05:0,24,428	0/1:14,1:14:1.65:310,0,2	0/1:10,4:15:29.41:288,0,29	1/1:2,0:1:1.55:4,2,0	./.	./.	0/1:2,0:2:12.79:41,0,13	1/1:2,0:2:2.99:24,3,0	1/1:2,0:2:2.99:23,3,0	0/1:5,4:9:7.55:95,0,8	0/0:13,0:13:35.76:0,36,978	1/1:1,0:1:3.01:40,3,0	0/0:16,0:16:33.08:0,33,759
chr10	102721568	.	T	TC	2906.79	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-9.576;DP=699;FS=11.921;HRun=7;HaplotypeScore=68.6404;InbreedingCoeff=0.9950;MQ=88.79;MQ0=1;MQRankSum=-2.161;QD=24.43;ReadPosRankSum=0.410;VQSLOD=3.1669;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:96.12:0,96,920	0/0:15,0:15:42.07:0,42,405	0/0:30,0:30:72:0,72,667	0/0:30,0:29:44.77:0,45,416	0/0:29,0:29:75.09:0,75,718	0/0:31,0:31:90.10:0,90,852	0/0:31,0:31:75.10:0,75,724	1/1:3,21:24:57.15:665,57,0	0/0:22,0:22:55.04:0,55,567	0/0:31,0:31:90.09:0,90,859	0/0:18,0:18:51.04:0,51,477	0/0:21,0:21:54.05:0,54,509	0/0:24,0:24:69.07:0,69,652	0/0:34,0:34:84.08:0,84,797	0/0:28,0:28:75.11:0,75,724	0/0:19,0:19:51.08:0,51,492	0/0:39,0:39:99:0,99,937	0/0:22,0:22:63.10:0,63,608	1/1:5,21:26:63.13:729,63,0	1/1:2,16:18:42.09:491,42,0	1/1:5,24:29:31.21:660,31,0	0/0:21,0:21:48.07:0,48,462	0/0:10,0:10:21:0,21,197	0/0:48,0:47:99:0,129,1239	0/0:12,0:12:27.01:0,27,254	0/0:20,0:20:51.08:0,51,493	1/1:3,19:22:45.14:538,45,0	0/0:5,0:5:15.02:0,15,145
chr10	102724243	.	AAC	A	1597.29	PASS	AB=0.910;AC=36;AF=0.692;AN=52;BaseQRankSum=1.876;DP=532;FS=0.724;HRun=0;HaplotypeScore=94.1736;InbreedingCoeff=0.2721;MQ=65.37;MQ0=21;MQRankSum=0.354;QD=3.91;ReadPosRankSum=-0.041;VQSLOD=2.4118;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,17:37:3.01:33,3,0	1/1:5,0:4:8.97:72,9,0	./.	./.	0/0:16,0:16:26.65:0,27,214	0/1:15,0:15:9.01:94,0,9	1/1:24,0:22:11.84:98,12,0	0/1:24,0:26:0:0,0,0	1/1:14,1:14:20.86:168,21,0	0/0:19,0:18:20.26:0,20,153	0/0:10,0:10:11.81:0,12,100	0/1:19,0:19:2.19:2,0,177	0/1:11,5:16:14.96:27,0,15	1/1:8,0:8:11.97:101,12,0	1/1:16,1:14:26.94:226,27,0	0/1:21,0:21:44.89:45,0,104	0/0:20,0:20:17.79:0,18,145	0/1:5,8:12:10.97:27,0,11	1/1:14,0:14:8.53:47,9,0	1/1:15,0:19:5.99:49,6,0	1/1:23,0:19:2.99:24,3,0	1/1:14,12:25:2.86:16,3,0	1/1:14,0:14:8.97:72,9,0	1/1:28,0:26:32.94:281,33,0	1/1:15,0:14:20.95:175,21,0	0/1:21,0:20:33.13:33,0,97	1/1:11,1:15:20.47:144,20,0	0/1:12,0:12:29.02:29,0,65
chr10	102724414	.	AT	A	5560.12	PASS	AB=0.811;AC=29;AF=0.518;AN=56;BaseQRankSum=10.838;DP=605;FS=2.388;HRun=10;HaplotypeScore=66.3957;InbreedingCoeff=0.8062;MQ=75.56;MQ0=0;MQRankSum=-0.358;QD=16.95;ReadPosRankSum=4.062;VQSLOD=5.4464;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,34:38:63.18:775,63,0	1/1:1,8:9:23.99:208,24,0	0/1:22,2:24:15.98:16,0,259	0/1:16,1:16:35.84:36,0,167	0/0:37,0:37:87.02:0,87,941	1/1:1,17:18:38.99:339,39,0	1/1:2,20:22:47.99:417,48,0	0/0:31,0:31:80.02:0,80,860	1/1:6,18:24:34.38:446,34,0	0/0:26,0:27:54.15:0,54,597	0/0:20,0:20:48.12:0,48,522	0/0:23,0:23:51.13:0,51,556	0/1:3,10:13:3.20:204,0,3	1/1:2,9:11:26.98:234,27,0	1/1:5,15:20:35.97:312,36,0	0/0:14,0:14:39.11:0,39,431	1/1:2,20:22:40.47:406,40,0	1/1:2,12:14:32.99:286,33,0	0/0:15,1:16:13.04:0,13,364	0/0:20,0:20:45.11:0,45,490	0/0:26,0:26:72.19:0,72,796	1/1:6,18:24:50.95:442,51,0	1/1:4,16:20:41:345,41,0	1/1:6,18:24:50.71:443,51,0	1/1:0,28:28:74.99:651,75,0	0/0:20,0:20:51.14:0,51,564	0/0:23,2:25:37.11:0,37,629	0/0:18,0:18:54.14:0,54,592
chr10	102724813	.	CGTGTGTGT	C	3760.54	PASS	AB=0.762;AC=27;AF=0.519;AN=52;BaseQRankSum=3.137;DP=671;FS=0.668;HRun=0;HaplotypeScore=157.1471;InbreedingCoeff=0.5566;MQ=60.61;MQ0=28;MQRankSum=-7.599;QD=10.53;ReadPosRankSum=1.553;VQSLOD=2.7387;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,8:34:3.01:40,3,0	1/1:4,1:5:3.01:75,3,0	./.	./.	0/1:19,1:24:14.64:15,0,236	1/1:15,4:19:3.01:75,3,0	0/1:21,6:28:6.46:266,0,6	0/0:33,0:33:25.33:0,25,700	1/1:10,11:22:24.08:526,24,0	0/0:13,0:13:9.02:0,9,185	0/0:7,0:6:6.02:0,6,187	0/0:12,0:20:5.03:0,5,131	1/1:19,10:29:18.01:450,18,0	1/1:11,13:26:38.98:842,39,0	1/1:16,12:29:15.05:320,15,0	0/0:19,0:20:24.08:0,24,832	1/1:24,1:26:7.68:151,8,0	1/1:16,6:22:12.04:300,12,0	0/0:17,0:18:21.07:0,21,711	0/0:17,0:19:5.05:0,5,171	0/0:53,0:74:23.63:0,24,791	1/1:10,3:13:3.01:75,3,0	1/1:11,5:16:8.94:116,9,0	0/1:22,14:39:33.99:210,0,34	1/1:17,6:23:12.04:300,12,0	0/0:14,0:14:12.04:0,12,342	0/0:18,0:23:17.09:0,17,450	0/0:4,0:5:3.01:0,3,65
chr10	102726105	.	AGT	A	1583.15	PASS	AB=0.875;AC=29;AF=0.630;AN=46;BaseQRankSum=2.217;DP=620;FS=0.783;HRun=0;HaplotypeScore=95.8440;InbreedingCoeff=0.2152;MQ=57.77;MQ0=13;MQRankSum=1.557;QD=3.94;ReadPosRankSum=3.984;VQSLOD=2.1795;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,14:34:18:194,18,0	./.	./.	./.	0/0:16,0:18:19.59:0,20,228	1/1:15,9:24:17.84:163,18,0	1/1:17,5:22:21.05:227,21,0	./.	0/1:20,0:20:35.32:39,0,35	0/1:24,1:25:20.38:20,0,118	0/0:7,0:7:3.01:0,3,44	0/0:18,0:18:16.30:0,16,223	1/1:11,3:14:8.81:97,9,0	0/1:22,7:29:35.39:56,0,35	1/1:19,4:23:6.91:104,7,0	0/1:15,1:16:20.37:20,0,120	1/1:15,8:20:20.88:208,21,0	0/1:13,3:16:10.75:56,0,11	0/1:12,0:17:4.74:8,0,5	1/1:16,0:20:5.68:28,6,0	./.	1/1:16,2:20:20.70:190,21,0	0/1:18,5:23:35.41:56,0,35	1/1:23,5:27:11.81:168,12,0	1/1:17,6:23:3.01:32,3,0	0/0:20,0:20:2.39:0,2,267	1/1:11,0:20:15.76:73,16,0	0/0:20,0:20:9.03:0,9,133
chr10	102726215	.	C	CT	21017.31	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-15.829;DP=672;FS=1.000;HRun=0;HaplotypeScore=67.1763;InbreedingCoeff=0.9982;MQ=91.35;MQ0=0;MQRankSum=-4.017;QD=44.34;ReadPosRankSum=2.408;VQSLOD=5.2558;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,51:51:99:2445,154,0	1/1:0,8:8:24.08:384,24,0	0/0:25,0:25:70.99:0,71,825	0/0:28,0:28:74.87:0,75,947	0/0:24,0:24:72.24:0,72,1007	1/1:0,20:20:54.18:863,54,0	1/1:0,24:24:60.20:959,60,0	1/1:1,33:34:99:1516,99,0	1/1:0,14:14:42.08:641,42,0	0/0:28,0:28:81.27:0,81,1133	0/0:12,0:12:36.11:0,36,486	0/0:28,0:28:81.27:0,81,1133	1/1:0,24:24:72.25:1148,72,0	1/1:1,23:24:27.27:1013,27,0	1/1:0,28:28:75.26:1199,75,0	0/0:24,0:24:69.23:0,69,962	1/1:1,20:21:60.20:959,60,0	1/1:1,19:20:54.18:863,54,0	1/1:0,18:18:54.18:840,54,0	1/1:0,30:30:84.29:1332,84,0	1/1:0,25:25:69.24:1102,69,0	1/1:1,29:30:81.28:1295,81,0	1/1:0,23:23:51.17:815,51,0	1/1:0,28:28:81.28:1294,81,0	1/1:0,23:23:66.23:1055,66,0	0/0:23,0:23:66.22:0,66,923	1/1:0,29:29:81.28:1295,81,0	0/0:6,0:6:18.06:0,18,251
chr10	102728704	.	GAA	G	4001.34	PASS	AB=0.686;AC=30;AF=0.536;AN=56;BaseQRankSum=-1.777;DP=429;FS=0.000;HRun=13;HaplotypeScore=59.3120;InbreedingCoeff=0.6879;MQ=58.18;MQ0=8;MQRankSum=2.468;QD=15.21;ReadPosRankSum=5.242;VQSLOD=2.1668;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:45.07:436,45,0	0/0:4,0:3:2.88:0,3,15	0/1:12,0:6:15.74:16,0,56	0/0:9,0:5:13.37:0,13,90	0/0:13,0:14:29.46:0,29,399	1/1:1,10:10:24.04:233,24,0	1/1:4,15:21:29.93:341,30,0	0/1:10,2:24:19.22:19,0,76	1/1:3,11:14:30.01:291,30,0	0/0:13,0:15:39.07:0,39,493	0/0:13,0:13:21.48:0,21,249	0/0:13,0:16:33.04:0,33,403	1/1:3,13:16:30.52:292,31,0	1/1:4,12:15:33.04:320,33,0	1/1:0,15:15:39.06:378,39,0	0/0:18,1:22:33.49:0,33,710	1/1:3,16:19:38.62:402,39,0	1/1:4,16:20:38.30:377,38,0	0/1:7,1:11:8.63:9,0,40	0/0:4,0:12:17.47:0,17,60	0/1:4,1:15:3.12:3,0,86	1/1:2,7:9:21.03:203,21,0	1/1:1,4:5:2.99:29,3,0	1/1:1,17:18:42.04:407,42,0	1/1:4,9:13:26.77:245,27,0	0/0:21,0:21:45.09:0,45,570	0/0:5,1:20:10.40:0,10,119	0/0:17,0:19:53.61:0,54,693
chr10	102729148	.	AT	A	2168.94	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.798;DP=517;FS=21.039;HRun=10;HaplotypeScore=49.2147;InbreedingCoeff=0.9289;MQ=71.62;MQ0=0;MQRankSum=-0.230;QD=19.54;ReadPosRankSum=-1.777;VQSLOD=2.1189;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,1:40:64.11:0,64,902	0/0:8,0:8:24.06:0,24,266	0/0:18,0:18:17.38:0,17,273	0/0:8,0:8:11.92:0,12,107	0/0:26,0:26:69.15:0,69,738	0/0:19,0:19:51.13:0,51,556	0/0:20,1:22:30.89:0,31,539	1/1:7,25:32:74.94:644,75,0	0/0:8,0:8:24.06:0,24,265	0/0:23,0:23:69.18:0,69,752	0/0:15,0:15:41.91:0,42,424	0/0:16,0:16:36.20:0,36,419	0/0:10,0:10:24.06:0,24,258	0/0:7,0:7:21.06:0,21,232	0/0:16,0:16:42.11:0,42,465	0/0:19,0:19:54.04:0,54,580	0/0:26,1:27:37.08:0,37,617	0/0:29,0:29:72.18:0,72,787	1/1:1,15:16:44.95:382,45,0	1/1:3,24:27:65.96:573,66,0	1/1:0,18:18:47.99:417,48,0	0/0:10,1:11:7.02:0,7,291	0/0:10,0:10:30.04:0,30,318	0/0:19,1:20:19.07:0,19,438	0/0:25,1:26:43.14:0,43,704	0/0:24,0:24:63.13:0,63,677	1/1:6,12:18:41.56:327,42,0	0/0:4,0:4:3.01:0,3,33
chr10	102730008	.	A	AT	2981.07	PASS	AB=1.000;AC=37;AF=0.685;AN=54;BaseQRankSum=8.261;DP=184;FS=30.538;HRun=3;HaplotypeScore=30.2592;InbreedingCoeff=0.6952;MQ=55.86;MQ0=1;MQRankSum=-6.676;QD=24.44;ReadPosRankSum=-0.347;VQSLOD=1.4160;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,3:7:9.03:119,9,0	1/1:0,1:1:3.01:43,3,0	0/0:5,0:5:12.04:0,12,149	0/1:3,0:2:1.86:2,0,32	0/0:14,0:14:40.37:0,40,486	1/1:0,3:3:9.03:123,9,0	1/1:1,3:4:12.04:157,12,0	1/1:13,16:26:63.02:815,63,0	1/1:2,4:6:15.02:187,15,0	0/0:7,0:7:21.04:0,21,230	0/0:6,0:6:15.04:0,15,174	0/0:6,0:6:18.06:0,18,223	1/1:2,1:3:6.02:80,6,0	1/1:3,0:3:3.01:36,3,0	./.	0/0:2,0:2:3.01:0,3,37	1/1:3,11:10:27.05:334,27,0	1/1:5,9:13:33.09:426,33,0	1/1:4,1:5:12.04:159,12,0	1/1:4,0:4:6.02:67,6,0	1/1:3,1:4:5.61:53,6,0	1/1:2,0:2:3:25,3,0	1/1:0,2:1:3.01:43,3,0	1/1:1,2:1:3.01:43,3,0	1/1:3,6:7:21.07:280,21,0	0/0:4,0:4:12.03:0,12,138	1/1:3,2:5:15.02:175,15,0	0/0:18,0:18:48.13:0,48,580
chr10	102730009	.	TTATTTA	T	2950.13	PASS	AB=0.856;AC=31;AF=0.574;AN=54;BaseQRankSum=4.658;DP=179;FS=18.577;HRun=0;HaplotypeScore=45.3094;InbreedingCoeff=0.4718;MQ=55.74;MQ0=1;MQRankSum=-4.844;QD=26.11;ReadPosRankSum=-2.398;VQSLOD=0.6534;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,5:7:3.95:36,4,0	1/1:1,0:1:3.01:67,3,0	0/0:5,0:5:12.04:0,12,260	0/0:2,0:2:5.23:0,5,82	0/0:14,0:14:42.10:0,42,1197	1/1:3,0:3:5.81:140,6,0	1/1:4,0:4:9.50:175,10,0	1/1:18,11:26:71.97:842,72,0	1/1:6,0:6:9.26:123,9,0	0/0:7,0:7:21.05:0,21,449	0/0:6,0:6:18.04:0,18,382	0/0:6,0:6:18.06:0,18,484	1/1:1,1:2:3.01:72,3,0	1/1:0,1:1:3.01:71,3,0	./.	0/0:1,0:1:3.01:0,3,74	0/1:12,2:10:6.72:304,0,7	0/1:12,2:13:63.78:481,0,64	1/1:1,3:4:4.07:151,4,0	1/1:1,3:4:6.02:144,6,0	1/1:2,2:4:3.48:31,3,0	1/1:2,0:2:3:25,3,0	0/0:2,0:1:2.98:0,3,22	1/1:3,0:1:3.01:63,3,0	0/1:7,2:7:36.38:193,0,36	0/0:4,0:4:12.03:0,12,285	1/1:3,2:5:12.48:210,12,0	0/0:18,0:18:48.16:0,48,1384
chr10	102730012	.	TTTA	T	1183.77	PASS	AB=0.918;AC=23;AF=0.442;AN=52;BaseQRankSum=3.923;DP=174;FS=32.815;HRun=0;HaplotypeScore=43.3067;InbreedingCoeff=0.2269;MQ=55.19;MQ0=2;MQRankSum=-3.069;QD=11.84;ReadPosRankSum=-2.910;VQSLOD=1.1756;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:7:4.07:0,4,13	1/1:1,0:1:3:25,3,0	0/0:5,0:5:9.03:0,9,112	0/0:3,0:2:5.93:0,6,55	0/0:14,0:14:37.37:0,37,667	1/1:2,1:3:1.66:50,2,0	1/1:2,2:4:1.72:66,2,0	1/1:29,0:26:71.01:594,71,0	0/1:3,1:4:5.16:34,0,5	0/0:4,0:4:12.04:0,12,207	0/0:7,0:7:17.27:0,17,251	0/0:6,0:6:12.04:0,12,236	0/1:2,0:2:1.08:25,0,1	1/1:1,0:1:3:29,3,0	./.	0/0:1,0:1:3.01:0,3,37	0/1:9,4:9:5.70:77,0,6	0/1:10,3:12:26.30:140,0,26	0/1:4,0:4:2.31:26,0,2	1/1:3,0:3:6.01:60,6,0	0/1:3,0:3:1.24:34,0,1	./.	0/1:3,0:2:3.11:28,0,3	1/1:2,1:1:2.98:21,3,0	0/1:7,1:6:7.61:84,0,8	0/0:3,0:3:9.03:0,9,140	0/1:6,0:6:42.57:47,0,43	0/0:23,0:22:60.20:0,60,1023
chr10	102730015	.	A	AT	2634.76	PASS	AB=0.838;AC=32;AF=0.615;AN=52;BaseQRankSum=7.961;DP=180;FS=69.708;HRun=3;HaplotypeScore=34.4788;InbreedingCoeff=0.5700;MQ=50.71;MQ0=2;MQRankSum=-6.650;QD=22.91;ReadPosRankSum=1.649;VQSLOD=-0.6270;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,3:7:6.02:86,6,0	1/1:1,0:1:3:26,3,0	0/0:4,0:4:9.03:0,9,112	0/0:3,0:2:1.48:0,1,34	0/0:14,0:14:37.36:0,37,449	1/1:2,1:3:9.02:105,9,0	1/1:2,1:3:9.03:116,9,0	1/1:14,16:28:78.72:1057,79,0	1/1:2,2:4:9.03:123,9,0	0/0:4,0:4:12.04:0,12,149	0/0:7,0:7:17.97:0,18,203	0/0:5,0:5:12.04:0,12,149	1/1:1,1:2:6.02:73,6,0	1/1:1,0:1:3:29,3,0	./.	0/0:1,0:1:3.01:0,3,37	1/1:7,5:8:18.05:226,18,0	0/1:12,4:13:8.51:276,0,9	1/1:5,1:6:12.49:141,12,0	1/1:3,0:3:6.01:60,6,0	1/1:2,1:3:6.02:79,6,0	./.	1/1:0,3:2:6.02:76,6,0	1/1:3,0:1:2.98:21,3,0	1/1:4,5:7:18.05:231,18,0	0/0:3,0:3:9.03:0,9,111	0/1:6,1:7:35.50:88,0,35	0/0:24,0:23:60.19:0,60,742
chr10	102730144	.	CTTT	C	2281.93	PASS	AB=0.606;AC=35;AF=0.625;AN=56;BaseQRankSum=6.559;DP=294;FS=0.839;HRun=18;HaplotypeScore=59.9305;InbreedingCoeff=0.7038;MQ=74.95;MQ0=10;MQRankSum=1.636;QD=12.14;ReadPosRankSum=7.053;VQSLOD=-0.1729;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,7:11:20.37:205,20,0	1/1:8,1:9:1.64:28,2,0	0/0:19,0:10:14.90:0,15,142	0/0:19,0:11:9.50:0,9,117	0/0:11,0:13:23.98:0,24,280	1/1:5,5:9:13.78:146,14,0	1/1:3,7:10:20.25:205,20,0	1/1:10,5:14:12.80:145,13,0	1/1:7,3:10:7.45:87,7,0	0/0:5,0:8:18.02:0,18,221	0/0:10,0:10:19.62:0,20,297	0/0:8,0:8:11.99:0,12,121	1/1:4,1:5:2.15:29,2,0	1/1:2,6:9:20.41:191,20,0	0/0:5,0:4:0:0,0,1	0/0:2,0:6:11.95:0,12,108	1/1:11,9:17:22.36:234,22,0	0/1:7,13:19:11.60:314,0,12	1/1:5,1:5:5.16:46,5,0	1/1:3,2:5:5.04:58,5,0	1/1:5,5:9:14.79:147,15,0	1/1:1,4:5:8.98:88,9,0	1/1:3,4:7:8.01:87,8,0	1/1:6,11:16:35.47:352,35,0	1/1:4,3:7:4.76:58,5,0	0/0:8,0:8:9.91:0,10,109	1/1:3,3:6:5.76:59,6,0	0/0:9,0:9:19.21:0,19,197
chr10	102732742	.	G	GT	9241.46	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-15.384;DP=663;FS=1.751;HRun=8;HaplotypeScore=62.0940;InbreedingCoeff=0.9992;MQ=79.14;MQ0=0;MQRankSum=-6.960;QD=27.92;ReadPosRankSum=3.087;VQSLOD=5.4955;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:34:81.67:911,82,0	1/1:1,9:10:21.06:242,21,0	0/0:25,0:27:53.95:0,54,476	0/0:17,0:16:34.20:0,34,292	0/0:28,1:29:49.42:0,49,707	1/1:4,20:24:29.70:596,30,0	1/1:6,13:19:36.11:416,36,0	0/0:29,0:29:57.02:0,57,522	1/1:1,13:14:36.11:415,36,0	0/0:33,0:33:90.04:0,90,824	0/0:21,0:21:59.98:0,60,537	0/0:23,0:23:69.04:0,69,632	1/1:4,21:27:66.02:730,66,0	1/1:2,16:18:42.12:485,42,0	1/1:2,21:23:60.14:678,60,0	0/0:13,0:13:36.02:0,36,329	1/1:2,26:29:53.97:853,54,0	1/1:2,21:23:51.15:589,51,0	0/0:23,0:22:47.68:0,48,419	0/0:30,0:31:86.08:0,86,774	0/0:24,0:24:63.02:0,63,577	1/1:0,21:21:63.19:727,63,0	1/1:2,33:35:87.24:988,87,0	1/1:4,31:37:99:1128,102,0	1/1:2,15:17:42.12:485,42,0	0/0:26,0:26:75.04:0,75,686	0/0:24,0:24:66.03:0,66,604	0/0:12,0:12:33.02:0,33,302
chr10	102735699	.	CA	C	6134.84	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=13.061;DP=477;FS=7.252;HRun=9;HaplotypeScore=76.6863;InbreedingCoeff=0.9409;MQ=53.96;MQ0=16;MQRankSum=0.308;QD=19.98;ReadPosRankSum=0.778;VQSLOD=5.2029;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,15:26:63.03:575,63,0	1/1:2,3:5:12.01:109,12,0	0/0:13,0:6:9.37:0,9,69	0/0:7,0:2:0:0,0,0	0/0:24,0:24:57.16:0,57,647	1/1:16,8:23:62.89:558,63,0	1/1:5,14:18:39.01:355,39,0	1/1:3,21:24:63.03:576,63,0	1/1:8,5:12:30.01:272,30,0	0/0:22,0:22:54.16:0,54,623	0/0:21,0:21:48.12:0,48,536	0/0:22,0:22:59.54:0,60,662	1/1:3,4:7:18:160,18,0	1/1:8,8:14:33:294,33,0	1/1:5,3:8:17.99:161,18,0	0/0:13,0:13:30.08:0,30,333	1/1:21,7:24:42.02:384,42,0	1/1:11,8:19:39.23:379,39,0	1/1:4,17:20:14.64:372,15,0	1/1:1,16:17:48.03:438,48,0	1/1:2,8:9:18.01:165,18,0	1/1:3,9:12:33.01:298,33,0	1/1:2,10:13:31.50:260,32,0	1/1:6,4:7:9:82,9,0	1/1:12,8:20:50.81:451,51,0	0/0:24,0:24:60.18:0,60,693	1/1:1,12:13:27.01:247,27,0	0/0:23,0:23:60.64:0,61,683
chr10	102736785	.	G	GAC	26808.66	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-10.520;DP=899;FS=7.875;HRun=0;HaplotypeScore=131.1123;InbreedingCoeff=0.9987;MQ=59.54;MQ0=10;MQRankSum=-0.530;QD=42.83;ReadPosRankSum=2.533;VQSLOD=6.0770;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:41:99:1833,102,0	1/1:2,10:12:30.10:527,30,0	0/0:52,0:38:90.13:0,90,1199	0/0:50,0:31:43.49:0,43,773	0/0:19,0:19:45.15:0,45,623	1/1:3,24:27:66.23:1164,66,0	1/1:3,27:30:57.20:1026,57,0	1/1:4,32:34:93.24:1555,93,0	1/1:5,32:37:81.09:1608,81,0	0/0:29,0:29:87.28:0,87,1200	0/0:19,0:19:51.17:0,51,714	0/0:37,0:37:99:0,102,1408	1/1:7,23:30:69.24:1223,69,0	1/1:7,27:34:84.27:1479,84,0	1/1:9,42:50:99:2130,120,0	0/0:30,0:30:81.27:0,81,1132	1/1:4,19:22:54.17:967,54,0	1/1:2,31:33:95.81:1662,96,0	1/1:3,19:22:57.11:933,57,0	1/1:3,28:31:81.28:1458,81,0	1/1:4,57:60:99:2717,154,0	1/1:5,20:25:66.22:1145,66,0	1/1:4,21:25:63.22:1122,63,0	1/1:7,57:64:99:2310,129,0	1/1:2,21:23:60.21:1079,60,0	0/0:28,0:28:81.27:0,81,1133	1/1:6,14:20:51.16:870,51,0	0/0:7,0:7:18.06:0,18,252
chr10	102736843	.	AACACACAC	A	7207.12	PASS	AB=0.913;AC=34;AF=0.654;AN=52;BaseQRankSum=4.356;DP=718;FS=4.481;HRun=0;HaplotypeScore=216.9178;InbreedingCoeff=0.4434;MQ=52.34;MQ0=28;MQRankSum=-4.272;QD=13.25;ReadPosRankSum=-2.016;VQSLOD=3.4609;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,5:37:32.66:583,33,0	1/1:10,0:10:5.85:86,6,0	./.	./.	0/0:21,0:21:39.13:0,39,1391	1/1:20,7:26:40.39:703,40,0	1/1:27,2:26:23.65:385,24,0	0/1:33,0:30:52.06:52,0,84	0/1:17,4:20:6.48:325,0,6	0/0:17,0:17:24.08:0,24,534	0/0:18,0:18:24.08:0,24,839	0/0:12,0:13:30.09:0,30,797	1/1:20,3:23:26.91:478,27,0	1/1:16,10:26:36.04:764,36,0	1/1:24,13:39:68.47:1329,68,0	0/1:27,0:29:18.26:18,0,1755	1/1:24,1:24:18.01:333,18,0	0/1:28,2:31:99:393,0,103	1/1:25,0:17:3.89:58,4,0	0/1:15,0:19:25.15:58,0,25	0/1:49,1:46:50.65:154,0,51	1/1:20,2:21:17.51:292,18,0	1/1:12,1:12:9.03:192,9,0	1/1:44,5:49:6.75:474,7,0	1/1:13,2:14:21.04:373,21,0	0/0:20,0:21:45.14:0,45,1210	1/1:10,0:15:26.25:157,26,0	0/0:11,0:11:18.06:0,18,672
chr10	102738513	.	A	AT	2128.44	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-9.873;DP=569;FS=1.546;HRun=9;HaplotypeScore=63.5087;InbreedingCoeff=0.9709;MQ=74.22;MQ0=0;MQRankSum=0.046;QD=21.07;ReadPosRankSum=-4.487;VQSLOD=2.4135;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:86.94:0,87,749	0/0:16,0:16:41.97:0,42,364	0/0:14,0:10:11.99:0,12,104	0/0:17,0:15:28.60:0,29,220	0/0:33,0:33:80.98:0,81,703	0/0:14,0:14:29.97:0,30,257	0/0:20,0:20:53.98:0,54,469	1/1:5,25:29:72.18:787,72,0	0/0:23,0:23:59.99:0,60,521	0/0:27,0:27:62.49:0,62,540	0/0:18,0:18:47.99:0,48,416	0/0:20,0:20:53.97:0,54,468	0/0:15,0:15:35.96:0,36,308	0/0:20,0:20:50.94:0,51,435	0/0:19,0:19:50.99:0,51,442	0/0:14,0:14:38.98:0,39,339	0/0:32,0:32:80.95:0,81,698	0/0:18,0:18:50.99:0,51,443	1/1:5,17:22:25.04:476,25,0	1/1:4,13:17:7.03:306,7,0	1/1:3,10:13:27.07:299,27,0	0/0:22,0:22:34.19:0,34,423	0/0:19,0:19:50.97:0,51,439	0/0:31,0:30:80.98:0,81,703	0/0:14,0:14:38.98:0,39,338	0/0:18,0:18:47.98:0,48,417	1/1:4,15:19:39.11:431,39,0	0/0:8,0:8:24:0,24,208
chr10	102738580	.	AG	A	5484.33	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=5.434;DP=516;FS=1.160;HRun=8;HaplotypeScore=60.8751;InbreedingCoeff=0.9841;MQ=82.63;MQ0=1;MQRankSum=-1.889;QD=21.34;ReadPosRankSum=8.505;VQSLOD=3.9946;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:30:69.10:665,69,0	1/1:2,15:17:34.03:368,34,0	0/0:28,0:24:32.85:0,33,458	0/0:17,0:14:29.30:0,29,265	0/0:22,0:22:63.19:0,63,751	1/1:0,14:14:42.07:405,42,0	1/1:5,12:17:27.04:260,27,0	0/0:17,0:23:48.04:0,48,496	1/1:2,14:16:33.05:318,33,0	0/0:19,0:18:48.15:0,48,575	0/0:16,0:16:45.11:0,45,516	0/0:19,0:19:48.15:0,48,574	1/1:4,11:15:27.04:260,27,0	1/1:0,13:13:30.05:289,30,0	1/1:1,15:16:36.06:347,36,0	0/0:13,0:12:33.08:0,33,374	1/1:2,20:22:51.08:492,51,0	1/1:0,20:20:54.09:521,54,0	0/0:16,0:16:45.09:0,45,503	0/0:17,0:17:35.94:0,36,380	0/0:20,0:20:57.11:0,57,625	1/1:1,15:16:45.07:434,45,0	1/1:3,15:18:6.07:260,6,0	1/1:3,16:19:36.06:347,36,0	1/1:4,20:24:53.14:519,53,0	0/0:24,0:24:72.16:0,72,802	0/0:16,0:16:42.08:0,42,476	0/0:8,0:8:17.99:0,18,177
chr10	102741229	.	A	AAGTGTAG	45571.16	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-7.658;DP=721;FS=0.000;HRun=0;HaplotypeScore=156.3080;InbreedingCoeff=0.9974;MQ=75.66;MQ0=0;MQRankSum=-19.274;QD=89.71;ReadPosRankSum=1.200;VQSLOD=5.7338;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,26:43:81.28:3227,81,0	1/1:2,10:15:33.11:1325,33,0	0/0:23,0:23:63.18:0,63,1412	0/0:23,0:23:60.20:0,60,1428	0/0:26,0:26:75.24:0,75,1865	1/1:5,23:31:72.25:2873,72,0	1/1:7,24:32:81.28:3257,81,0	1/1:19,16:40:99:4131,120,0	1/1:6,12:20:45.15:1771,45,0	0/0:36,0:36:99:0,108,2683	0/0:19,0:19:54.17:0,54,1334	0/0:19,0:19:57.14:0,57,1390	1/1:12,12:25:63.17:2334,63,0	1/1:9,15:24:54.19:2141,54,0	1/1:10,25:37:84.29:3333,84,0	0/0:25,0:25:72.23:0,72,1803	1/1:2,13:15:45.15:1790,45,0	1/1:4,12:17:45.15:1756,45,0	1/1:8,7:18:51.13:1729,51,0	1/1:10,18:30:72.25:2847,72,0	1/1:5,6:11:15.05:522,15,0	1/1:8,22:35:81.28:3223,81,0	1/1:10,22:34:69.24:2760,69,0	1/1:10,14:26:33.58:1318,34,0	1/1:12,21:36:87.30:3426,87,0	0/0:26,0:26:78.26:0,78,1994	1/1:4,13:18:45.15:1808,45,0	0/0:16,0:16:48.15:0,48,1212
chr10	102741964	.	CT	C	1652.54	PASS	AB=0.927;AC=13;AF=0.232;AN=56;BaseQRankSum=-2.472;DP=611;FS=17.114;HRun=11;HaplotypeScore=82.3385;InbreedingCoeff=0.6780;MQ=68.91;MQ0=11;MQRankSum=1.387;QD=8.61;ReadPosRankSum=1.985;VQSLOD=0.9096;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:51:99:0,120,1231	0/1:7,1:9:6.77:7,0,124	0/1:49,1:20:13.10:13,0,64	0/0:45,1:16:26.05:0,26,193	0/0:21,2:24:32.32:0,32,520	0/0:5,0:5:11.98:0,12,115	0/0:19,0:19:33.07:0,33,345	1/1:14,24:38:29.35:467,29,0	0/0:13,0:13:24.06:0,24,255	0/0:28,0:27:44.54:0,45,665	0/0:17,0:17:17.85:0,18,378	0/0:17,1:18:17.44:0,17,376	0/0:5,0:5:8.99:0,9,85	0/0:13,0:13:36.23:0,36,364	0/0:13,0:13:36.05:0,36,371	0/0:16,0:16:39.09:0,39,409	0/0:29,0:30:77.96:0,78,791	0/0:18,0:18:36.06:0,36,367	1/1:4,16:19:14.80:312,15,0	1/1:4,24:28:68.88:565,69,0	1/1:4,7:11:20.97:172,21,0	0/0:18,0:18:48.11:0,48,500	0/0:20,0:20:30.07:0,30,319	0/0:19,0:19:33.06:0,33,337	0/0:17,0:17:2.14:0,2,198	0/0:29,0:29:54.13:0,54,569	1/1:9,16:25:9.94:288,10,0	0/1:8,1:9:3.59:4,0,171
chr10	102741981	.	C	CT	5587.76	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-9.967;DP=673;FS=8.682;HRun=10;HaplotypeScore=77.7435;InbreedingCoeff=0.8739;MQ=62.39;MQ0=22;MQRankSum=2.000;QD=16.06;ReadPosRankSum=3.025;VQSLOD=5.0287;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,44:55:99:1220,100,0	1/1:1,5:8:20.79:189,21,0	0/1:68,0:13:19.84:20,0,43	0/0:59,0:18:3.77:0,4,129	0/0:24,0:24:46.42:0,46,370	1/1:1,7:8:18.52:193,19,0	1/1:3,13:17:32.91:331,33,0	0/0:37,1:39:47.26:0,47,565	1/1:0,14:14:24.06:256,24,0	0/0:29,0:28:61.95:0,62,486	0/0:17,0:17:50.87:0,51,407	0/0:14,0:15:31.93:0,32,243	1/1:1,4:5:6.49:64,6,0	1/1:2,13:15:39.05:403,39,0	1/1:6,11:17:21.05:223,21,0	0/0:16,0:16:47.93:0,48,392	1/1:8,27:35:41.82:643,42,0	1/1:1,25:25:57.14:607,57,0	0/0:22,0:20:42.79:0,43,342	0/0:32,0:32:84.28:0,84,678	0/0:10,0:10:26.95:0,27,219	1/1:6,11:18:14.89:328,15,0	1/1:7,17:23:40.34:416,40,0	1/1:0,18:18:42.11:448,42,0	1/1:4,12:17:5.60:246,6,0	0/0:25,0:26:58.80:0,59,473	0/0:24,0:24:39.20:0,39,443	0/0:10,0:11:19.97:0,20,150
chr10	102743717	.	T	TAA	3671.79	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-7.563;DP=706;FS=1.839;HRun=10;HaplotypeScore=86.0165;InbreedingCoeff=0.9943;MQ=75.02;MQ0=1;MQRankSum=-0.059;QD=28.03;ReadPosRankSum=-4.246;VQSLOD=2.9826;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:55:99:0,120,1201	0/0:16,0:17:47.83:0,48,469	0/0:11,0:11:15.01:0,15,153	0/0:14,0:14:17.96:0,18,171	0/0:30,0:30:65.83:0,66,646	0/0:19,0:19:53.83:0,54,522	0/0:25,0:26:68.83:0,69,666	1/1:6,24:33:77.15:1011,77,0	0/0:32,0:32:84.14:0,84,854	0/0:27,0:27:63.06:0,63,636	0/0:15,0:16:40.54:0,41,363	0/0:24,0:25:71.89:0,72,713	0/0:23,0:25:68.59:0,69,654	0/0:24,0:25:71.86:0,72,706	0/0:31,0:32:89.88:0,90,879	0/0:18,0:18:36:0,36,419	0/0:35,0:36:89.91:0,90,897	0/0:19,0:20:50.82:0,51,500	1/1:4,16:24:59.10:742,59,0	1/1:7,17:25:41.59:560,42,0	1/1:1,17:22:50.14:672,50,0	0/0:25,0:25:66.09:0,66,665	0/0:18,0:18:38.06:0,38,459	0/0:31,0:32:71.83:0,72,776	0/0:24,0:25:56.80:0,57,552	0/0:25,0:25:69.11:0,69,691	1/1:4,20:26:49.40:686,49,0	0/0:22,0:22:57.10:0,57,580
chr10	102747347	.	T	TC	13305.68	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=6.559;DP=787;FS=8.354;HRun=6;HaplotypeScore=116.4165;InbreedingCoeff=1.0000;MQ=79.31;MQ0=0;MQRankSum=-3.553;QD=31.53;ReadPosRankSum=3.289;VQSLOD=3.6623;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,61:64:99:2151,172,0	1/1:1,15:17:45.14:566,45,0	0/0:21,0:20:52.35:0,52,517	0/0:19,0:19:41.62:0,42,417	0/0:20,0:20:57.13:0,57,582	1/1:5,19:24:51.16:642,51,0	1/1:4,24:28:75.15:907,75,0	0/0:25,0:25:63.13:0,63,638	1/1:3,28:31:72.23:906,72,0	0/0:31,0:31:84.18:0,84,852	0/0:16,0:16:48.11:0,48,489	0/0:44,0:44:99:0,123,1247	1/1:4,25:29:69.19:845,69,0	1/1:5,33:38:99:1227,99,0	1/1:1,29:30:75.24:944,75,0	0/0:33,0:33:90.18:0,90,906	1/1:4,30:34:90.29:1132,90,0	1/1:3,27:30:78.25:977,78,0	0/0:18,0:18:42.09:0,42,428	0/0:20,0:20:57.13:0,57,581	0/0:53,0:53:99:0,144,1469	1/1:1,23:24:38.56:782,39,0	1/1:1,16:17:41.99:529,42,0	1/1:3,32:35:81.26:1019,81,0	1/1:1,20:21:54.17:679,54,0	0/0:26,0:26:66.14:0,66,673	0/0:25,0:25:72.16:0,72,735	0/0:14,0:14:39.09:0,39,397
chr10	102748253	.	G	GA	6155.85	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-5.363;DP=507;FS=4.650;HRun=9;HaplotypeScore=57.6076;InbreedingCoeff=0.9217;MQ=78.63;MQ0=2;MQRankSum=-1.155;QD=21.52;ReadPosRankSum=3.441;VQSLOD=5.6858;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,37:39:78.21:863,78,0	1/1:0,6:6:18.05:199,18,0	0/0:19,0:15:9.55:0,10,116	0/0:19,0:16:10.59:0,11,140	0/0:12,0:12:23.72:0,24,191	1/1:3,25:28:46.12:726,46,0	1/1:5,18:23:45.12:498,45,0	0/0:30,0:29:71.97:0,72,622	1/1:5,11:16:27.03:285,27,0	0/0:20,0:20:44.48:0,44,371	0/0:10,0:10:29:0,29,233	0/0:27,0:27:65.89:0,66,561	1/1:2,13:15:27.04:299,27,0	1/1:5,18:23:45.12:495,45,0	1/1:2,12:15:26.91:280,27,0	0/0:13,0:13:38.98:0,39,334	1/1:4,28:34:57.84:830,58,0	1/1:5,27:32:8.16:525,8,0	0/0:14,1:15:0.25:0,0,222	0/0:8,0:8:18:0,18,156	0/0:11,0:11:29.97:0,30,258	1/1:4,7:11:27.03:284,27,0	1/1:3,8:11:15.93:168,16,0	1/1:1,13:14:24.06:265,24,0	1/1:4,15:19:19.32:439,19,0	0/0:13,1:14:5.80:0,6,276	0/0:14,0:14:35.96:0,36,304	0/0:9,0:9:26.98:0,27,230
chr10	102748361	.	T	TAA	3540.05	PASS	AB=0.953;AC=26;AF=0.464;AN=56;BaseQRankSum=12.488;DP=542;FS=10.768;HRun=0;HaplotypeScore=100.1743;InbreedingCoeff=0.6666;MQ=69.79;MQ0=13;MQRankSum=-2.879;QD=11.38;ReadPosRankSum=10.069;VQSLOD=1.4397;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:32:329,0,32	0/1:3,0:3:18.36:18,0,47	0/0:58,0:17:3.07:0,3,246	0/1:63,0:18:4.90:5,0,181	0/0:17,0:17:48.12:0,48,640	1/1:14,0:13:28.61:287,29,0	1/1:20,2:23:7.81:330,8,0	0/0:28,0:27:63.18:0,63,851	1/1:13,0:13:21.79:149,22,0	0/0:14,0:14:39.12:0,39,535	0/0:13,0:13:36.11:0,36,497	0/0:16,0:16:42.14:0,42,596	0/1:10,1:13:24.12:199,0,24	1/1:12,2:15:31.19:290,31,0	1/1:9,0:9:13.53:76,14,0	0/0:10,0:9:27.04:0,27,377	1/1:42,1:44:66.23:568,66,0	1/1:22,1:23:30.98:345,31,0	0/0:17,0:17:51.17:0,51,733	0/0:18,0:18:46.69:0,47,614	0/0:5,0:4:9.03:0,9,119	1/1:4,1:5:6.64:33,7,0	1/1:8,1:9:15.84:131,16,0	1/1:21,3:25:14.19:340,14,0	1/1:22,1:24:49.85:439,50,0	0/0:18,0:18:51.16:0,51,704	0/0:7,0:7:18.06:0,18,263	0/0:10,0:10:21.06:0,21,276
chr10	102748370	.	TA	T	4561.69	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=12.110;DP=517;FS=78.991;HRun=2;HaplotypeScore=81.7787;InbreedingCoeff=0.9155;MQ=71.20;MQ0=10;MQRankSum=-1.753;QD=16.12;ReadPosRankSum=6.937;VQSLOD=1.4868;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,15:32:80.57:666,81,0	1/1:5,2:7:17.87:143,18,0	0/0:46,0:15:26.81:0,27,224	0/0:52,0:14:13.55:0,14,98	0/1:12,0:12:4.15:4,0,132	1/1:2,9:10:23.96:239,24,0	1/1:5,19:25:38.50:357,39,0	0/0:22,0:21:53.80:0,54,495	1/1:1,14:15:23.90:239,24,0	0/0:11,0:11:27:0,27,244	0/0:8,0:8:18:0,18,159	0/0:18,0:18:41.84:0,42,345	1/1:6,6:14:32.93:306,33,0	1/1:3,15:19:33.08:357,33,0	1/1:2,9:11:8.94:69,9,0	0/0:7,0:6:14.99:0,15,132	1/1:3,43:47:80.94:796,81,0	1/1:3,21:25:35.89:323,36,0	0/0:15,0:15:35.33:0,35,312	0/0:13,0:13:29.97:0,30,261	0/0:6,0:5:11.94:0,12,96	1/1:1,5:6:8.85:56,9,0	1/1:2,8:10:14.87:135,15,0	1/1:4,21:26:50.37:525,50,0	1/1:2,20:23:35.93:346,36,0	0/0:15,0:15:35.65:0,36,298	0/0:11,0:11:26.89:0,27,227	0/0:10,0:10:17.32:0,17,148
chr10	102748939	.	TCCC	T	1245.39	PASS	AB=0.783;AC=12;AF=0.214;AN=56;BaseQRankSum=11.199;DP=510;FS=5.210;HRun=3;HaplotypeScore=161.5214;InbreedingCoeff=-0.2934;MQ=59.52;MQ0=8;MQRankSum=-10.574;QD=5.19;ReadPosRankSum=6.116;VQSLOD=-0.1905;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,11:44:99:240,0,335	0/1:5,2:7:39.04:39,0,56	0/0:28,0:14:28.10:0,28,525	0/0:46,0:21:48.12:0,48,675	0/0:7,0:7:15.05:0,15,327	0/1:18,3:21:99:114,0,130	0/1:21,4:25:90.60:91,0,363	0/0:13,0:13:35.48:0,35,622	0/1:15,6:21:98.65:99,0,228	0/0:13,0:13:36.02:0,36,757	0/0:7,0:7:18.06:0,18,403	0/0:10,0:10:30.10:0,30,635	0/1:8,5:13:99:102,0,144	0/1:17,8:25:99:158,0,291	0/1:14,6:20:99:161,0,122	0/0:13,0:13:38.48:0,38,757	0/1:14,5:19:73.93:74,0,246	0/0:22,1:23:25.52:0,26,453	0/0:11,0:11:28.58:0,29,371	0/0:6,0:6:9.37:0,9,132	0/0:28,0:26:26.91:0,27,517	0/1:8,3:11:52.46:52,0,105	0/1:14,5:19:30.34:144,0,30	0/0:17,3:20:0.21:0,0,86	0/1:8,7:14:81.77:121,0,82	0/0:23,0:22:66.05:0,66,1322	0/0:15,0:14:31.12:0,31,419	0/0:7,0:5:11.97:0,12,224
chr10	102748941	.	CCTCTCT	C	2704.42	PASS	AB=1.000;AC=25;AF=0.463;AN=54;BaseQRankSum=9.630;DP=518;FS=17.780;HRun=0;HaplotypeScore=179.7394;InbreedingCoeff=-0.0734;MQ=57.46;MQ0=8;MQRankSum=-8.742;QD=7.51;ReadPosRankSum=8.244;VQSLOD=0.7046;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:44:99:428,0,145	0/1:9,0:9:65.23:65,0,82	./.	0/0:46,0:21:0.47:0,0,1	0/0:8,0:8:15.03:0,15,322	0/1:21,0:21:56.13:69,0,56	0/1:24,0:24:99:155,0,128	1/1:12,0:12:5.95:42,6,0	0/1:23,0:23:99:215,0,125	0/0:12,0:13:21.07:0,21,591	0/0:9,0:9:18.04:0,18,393	0/0:10,0:10:21.07:0,21,478	0/1:13,0:13:90.44:185,0,90	0/1:25,0:25:99:301,0,106	0/1:20,0:20:94.34:244,0,94	0/0:15,0:15:28.18:0,28,692	0/1:19,0:19:62.63:63,0,109	0/1:23,0:23:57.88:58,0,137	1/1:7,5:12:14.55:211,15,0	1/1:3,2:6:3.89:63,4,0	1/1:13,15:26:2.96:20,3,0	0/1:12,0:12:75.66:108,0,76	1/1:13,0:19:15.52:210,16,0	0/1:20,0:20:46.27:46,0,47	0/1:15,0:14:41.33:185,0,41	0/0:22,0:22:38.12:0,38,968	1/1:11,3:14:12.63:208,13,0	0/0:8,0:6:10.57:0,11,183
chr10	102748944	.	CTCTCTCT	C	3610.13	PASS	AB=0.836;AC=16;AF=0.286;AN=56;BaseQRankSum=8.641;DP=540;FS=26.202;HRun=0;HaplotypeScore=190.1037;InbreedingCoeff=-0.3949;MQ=57.22;MQ0=8;MQRankSum=-11.438;QD=11.18;ReadPosRankSum=6.562;VQSLOD=0.7222;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,12:49:99:537,0,556	0/1:7,2:9:99:124,0,115	0/0:26,0:11:25.31:0,25,280	0/0:49,0:23:47.19:0,47,461	0/0:10,0:10:24.08:0,24,655	0/1:20,3:23:99:140,0,241	0/1:20,2:24:99:258,0,249	0/0:10,0:10:30.06:0,30,346	0/1:18,5:24:99:365,0,211	0/0:13,0:13:36.12:0,36,966	0/0:11,0:11:27.09:0,27,696	0/0:11,0:11:33.11:0,33,881	0/1:12,5:17:99:246,0,121	0/1:17,7:25:99:430,0,178	0/1:16,5:22:99:360,0,128	0/0:16,0:16:48.15:0,48,1267	0/1:14,4:19:99:147,0,166	0/1:24,1:25:99:173,0,345	0/0:11,0:11:3.29:0,3,258	0/1:6,0:6:1.85:2,0,100	0/0:29,0:27:29.95:0,30,388	0/1:10,1:13:43.98:155,0,44	0/1:13,4:18:79.25:236,0,79	0/1:17,3:20:81.49:92,0,81	0/1:8,7:14:87.61:336,0,88	0/0:21,0:20:60.19:0,60,1657	0/1:14,0:13:9.72:10,0,248	0/0:9,0:7:18.06:0,18,413
chr10	102749732	.	CAT	C	2227.61	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=6.694;DP=490;FS=9.643;HRun=0;HaplotypeScore=119.9382;InbreedingCoeff=0.9743;MQ=56.61;MQ0=4;MQRankSum=-0.673;QD=10.87;ReadPosRankSum=0.636;VQSLOD=2.8211;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:23:28.12:278,28,0	1/1:6,2:8:20.30:149,20,0	0/0:25,0:15:24.28:0,24,310	0/0:33,0:13:15.46:0,15,217	0/0:20,0:20:34.18:0,34,636	1/1:10,1:11:17.94:140,18,0	1/1:11,3:13:20.78:144,21,0	0/0:19,0:19:54.76:0,55,471	1/1:9,3:12:14.96:120,15,0	0/0:19,0:19:51.21:0,51,499	0/0:14,0:14:28.93:0,29,456	0/0:26,0:26:69.04:0,69,915	1/1:12,4:16:26.82:178,27,0	1/1:11,3:14:20.31:147,20,0	1/1:12,7:19:23.99:259,24,0	0/0:20,0:20:15.61:0,16,625	1/1:8,3:11:26.84:207,27,0	1/1:7,2:8:6.43:108,6,0	0/0:13,0:13:31.57:0,32,215	0/0:18,0:18:41.06:0,41,331	0/0:34,0:34:45.08:0,45,558	1/1:12,7:19:29.90:235,30,0	1/1:11,4:15:20.94:166,21,0	1/1:17,5:22:24.40:194,24,0	1/1:7,4:11:17.89:133,18,0	0/0:9,0:9:27:0,27,397	0/0:18,0:18:41.43:0,41,326	0/0:17,0:17:37.67:0,38,607
chr10	102749734	.	T	TAC	1037.68	PASS	AB=0.940;AC=19;AF=0.396;AN=48;BaseQRankSum=3.830;DP=525;FS=11.185;HRun=0;HaplotypeScore=133.5401;InbreedingCoeff=0.2149;MQ=52.70;MQ0=6;MQRankSum=1.036;QD=4.05;ReadPosRankSum=0.558;VQSLOD=1.7583;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:21:4.87:18,5,0	0/1:7,0:7:4.46:4,0,18	./.	./.	0/0:20,0:21:32.34:0,32,309	1/1:12,0:12:2.90:17,3,0	./.	1/1:23,0:23:9.45:91,9,0	0/0:13,0:12:2.80:0,3,13	0/0:20,0:20:15.44:0,15,138	0/0:15,0:16:25.44:0,25,241	0/0:28,0:28:38.90:0,39,390	0/1:18,0:17:5.26:25,0,5	1/1:16,0:16:2.37:8,2,0	0/0:21,0:21:8.54:0,9,33	0/0:19,0:20:38.19:0,38,349	0/1:12,0:12:14.20:21,0,14	0/0:9,0:8:5.63:0,6,22	1/1:8,5:13:19.61:235,20,0	0/1:11,6:17:12.10:250,0,12	0/1:36,5:40:33.45:309,0,33	0/1:22,0:22:0:0,0,0	./.	0/1:22,0:22:0.01:0,0,1	0/0:14,0:14:0:0,0,0	0/1:12,0:12:17.21:17,0,167	0/1:15,4:19:14.45:187,0,14	0/0:18,0:18:31.36:0,31,296
chr10	102749768	.	CACAT	C	1234.94	PASS	AB=0.949;AC=27;AF=0.482;AN=56;BaseQRankSum=6.701;DP=658;FS=34.579;HRun=0;HaplotypeScore=160.0534;InbreedingCoeff=0.6116;MQ=43.77;MQ0=17;MQRankSum=0.103;QD=4.39;ReadPosRankSum=-4.613;VQSLOD=-0.4616;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:19:2.33:8,2,0	1/1:5,0:5:8.82:119,9,0	0/0:36,0:4:0.79:0,1,33	0/0:44,0:4:8.43:0,8,81	0/0:25,0:25:40.79:0,41,745	1/1:14,3:16:11.97:96,12,0	1/1:18,1:19:2.55:23,3,0	0/0:27,0:26:21.40:0,21,607	1/1:9,2:10:7.34:92,7,0	0/0:28,0:28:80.45:0,80,732	0/0:28,0:28:65.84:0,66,961	0/0:30,1:31:51.75:0,52,1029	1/1:21,2:21:20.51:208,21,0	1/1:15,1:16:5.07:31,5,0	1/1:21,3:24:18.25:176,18,0	0/0:26,0:25:53.96:0,54,848	1/1:11,5:16:20.83:209,21,0	1/1:15,3:13:5.81:177,6,0	0/1:16,0:14:3.55:4,0,316	0/0:30,0:30:24.51:0,25,468	0/0:42,0:39:62.93:0,63,898	1/1:23,1:24:8.98:72,9,0	1/1:16,4:18:11.97:97,12,0	0/1:19,3:22:11.35:41,0,11	0/1:27,1:26:6.35:75,0,6	0/0:28,0:28:63.25:0,63,834	0/0:18,0:18:0.35:0,0,303	0/0:14,0:14:5.02:0,5,635
chr10	102749770	.	CAT	C	1193.90	PASS	AB=0.926;AC=28;AF=0.500;AN=56;BaseQRankSum=7.190;DP=655;FS=32.116;HRun=0;HaplotypeScore=147.5306;InbreedingCoeff=0.5812;MQ=43.92;MQ0=17;MQRankSum=0.475;QD=4.02;ReadPosRankSum=-4.307;VQSLOD=0.2549;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,1:19:2.53:9,3,0	1/1:3,2:5:8.80:65,9,0	0/0:35,0:4:0.17:0,0,30	0/0:42,0:4:8.25:0,8,44	0/0:25,0:25:13.10:0,13,510	1/1:16,0:15:11.91:96,12,0	1/1:19,0:19:2.36:23,2,0	0/0:29,0:28:25.18:0,25,591	1/1:9,2:10:7.42:66,7,0	0/0:28,0:28:70.94:0,71,655	0/0:28,0:28:36.91:0,37,684	0/0:31,0:31:52.04:0,52,783	1/1:20,4:22:24.23:178,24,0	1/1:12,3:15:4.90:31,5,0	1/1:23,1:24:18.87:215,19,0	0/0:26,0:25:15.77:0,16,513	1/1:17,0:17:30.12:230,30,0	1/1:16,2:13:20.28:203,20,0	0/1:16,0:14:4.02:4,0,217	0/0:30,0:30:24.35:0,24,271	0/0:42,0:39:40.46:0,40,526	1/1:18,7:25:8.97:72,9,0	1/1:17,3:18:11.91:97,12,0	0/1:16,4:20:10.87:22,0,11	0/1:23,4:25:6.48:56,0,6	0/0:28,0:28:38.13:0,38,666	0/1:18,0:18:23.97:24,0,158	0/0:14,0:14:4.99:0,5,430
chr10	102749782	.	CTAGA	C	1046.33	PASS	AB=0.877;AC=15;AF=0.300;AN=50;BaseQRankSum=-2.324;DP=614;FS=2.731;HRun=0;HaplotypeScore=160.7755;InbreedingCoeff=0.4433;MQ=45.07;MQ0=15;MQRankSum=0.666;QD=5.85;ReadPosRankSum=2.821;VQSLOD=2.8813;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:15:4.82:0,5,37	1/1:5,0:5:0.47:1,0,0	./.	./.	1/1:13,7:20:15.05:228,15,0	0/0:21,0:20:27.05:0,27,292	0/0:18,0:17:3.79:0,4,32	./.	0/0:14,0:13:13.28:0,13,129	0/0:29,0:28:26.25:0,26,1080	0/1:27,0:27:4.16:4,0,800	1/1:16,13:29:21.07:319,21,0	0/1:17,0:15:2.62:3,0,67	0/0:13,0:13:6.02:0,6,63	0/0:23,0:23:18.05:0,18,191	0/0:16,0:29:18.06:0,18,310	0/0:16,0:16:10.31:0,10,132	0/0:15,0:12:5.60:0,6,41	1/1:10,0:10:3:28,3,0	0/0:13,0:30:0.44:0,0,1	1/1:30,0:30:1.04:3,1,0	0/0:23,0:23:6.01:0,6,63	0/0:20,0:18:11.73:0,12,127	0/0:20,0:21:8.95:0,9,106	0/0:28,0:27:14.83:0,15,157	0/1:12,17:27:21.48:553,0,21	0/0:7,0:16:0:0,0,0	1/1:7,3:10:3.01:46,3,0
chr10	102749835	.	T	TAG	2684.54	PASS	AB=0.971;AC=27;AF=0.482;AN=56;BaseQRankSum=10.603;DP=683;FS=4.822;HRun=0;HaplotypeScore=113.8870;InbreedingCoeff=0.8219;MQ=59.42;MQ0=43;MQRankSum=-2.805;QD=7.63;ReadPosRankSum=3.776;VQSLOD=2.8845;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,19:17:5.71:92,6,0	0/0:1,4:4:0:0,0,0	0/0:17,0:13:33.11:0,33,459	0/0:18,0:16:35.91:0,36,459	0/0:16,0:16:39.05:0,39,459	1/1:6,29:32:33.04:585,33,0	1/1:3,22:22:2.99:53,3,0	0/0:40,0:37:99:0,108,1436	1/1:6,18:21:12.51:214,13,0	0/0:37,0:37:99:0,105,1467	0/0:26,0:26:65.22:0,65,961	0/0:33,0:33:72.12:0,72,895	1/1:5,16:20:14.69:175,15,0	1/1:2,16:16:9.03:160,9,0	1/1:2,29:28:17.90:320,18,0	0/1:33,1:34:30.72:31,0,684	1/1:5,15:19:20.01:272,20,0	1/1:9,11:12:12.04:198,12,0	0/0:11,0:10:30.03:0,30,380	0/0:29,0:29:36.50:0,36,498	0/0:17,0:17:26.39:0,26,333	1/1:4,19:22:9.02:160,9,0	1/1:4,14:16:11.68:213,12,0	1/1:6,20:21:8.84:159,9,0	1/1:9,21:25:14.79:266,15,0	0/0:39,0:37:64.34:0,64,1168	0/0:24,0:24:48.16:0,48,683	0/0:19,0:19:36:0,36,464
chr10	102750921	.	GTTGT	G	12841.57	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=16.021;DP=722;FS=14.292;HRun=0;HaplotypeScore=122.5812;InbreedingCoeff=0.9997;MQ=90.47;MQ0=2;MQRankSum=-8.931;QD=39.51;ReadPosRankSum=6.991;VQSLOD=3.8576;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,39:41:99:2083,114,0	1/1:2,11:12:27.09:496,27,0	0/0:35,0:35:93.76:0,94,2180	0/0:30,0:28:68.96:0,69,1610	0/0:26,0:26:75.25:0,75,1891	1/1:0,13:13:30.10:551,30,0	1/1:0,28:28:60.16:1066,60,0	0/0:29,0:29:75.24:0,75,1791	1/1:1,25:25:57.15:1011,57,0	0/0:32,0:32:93.31:0,93,2352	0/0:19,0:19:54.19:0,54,1423	0/0:36,0:36:99:0,105,2741	1/1:2,20:22:51.13:901,51,0	1/1:4,17:21:39.05:646,39,0	1/1:1,22:23:51.09:867,51,0	0/0:26,0:26:78.27:0,78,1997	1/1:1,22:23:54.14:957,54,0	1/1:0,18:18:45.15:828,45,0	0/0:14,0:14:42.13:0,42,994	0/0:27,0:27:66.23:0,66,1710	0/0:47,0:47:99:0,135,3373	1/1:2,28:30:51.17:936,51,0	1/1:3,15:18:33.11:604,33,0	1/1:0,30:30:69.24:1269,69,0	1/1:3,16:19:36.08:626,36,0	0/0:28,0:27:66.21:0,66,1615	0/0:33,0:32:99:0,99,2538	0/0:15,0:15:39.13:0,39,1030
chr10	102751599	.	C	CA	14849.42	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-14.478;DP=616;FS=18.639;HRun=3;HaplotypeScore=59.5883;InbreedingCoeff=0.9987;MQ=90.77;MQ0=0;MQRankSum=-5.581;QD=35.96;ReadPosRankSum=2.125;VQSLOD=3.0902;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:93.27:1280,93,0	1/1:2,8:10:24.08:336,24,0	0/0:22,0:22:60.18:0,60,708	0/0:28,0:28:65.79:0,66,752	0/0:24,0:24:72.18:0,72,838	1/1:0,16:16:39.13:546,39,0	1/1:4,29:33:84.28:1177,84,0	1/1:1,24:25:69.22:946,69,0	1/1:1,17:18:48.08:629,48,0	0/0:27,0:27:63.19:0,63,756	0/0:20,0:20:45.12:0,45,527	0/0:25,0:25:72.22:0,72,864	1/1:0,19:19:51.17:714,51,0	1/1:2,23:25:69.23:966,69,0	1/1:0,15:15:45.07:587,45,0	0/0:22,0:22:66.18:0,66,778	1/1:0,33:33:93.31:1302,93,0	1/1:1,19:20:51.17:709,51,0	1/1:4,6:11:21.07:283,21,0	1/1:0,14:14:36.12:504,36,0	1/1:1,21:22:54.18:756,54,0	1/1:0,21:21:54.18:755,54,0	1/1:1,17:18:45.15:630,45,0	1/1:1,36:37:99:1428,102,0	1/1:0,21:21:57.15:776,57,0	0/0:27,0:27:72.22:0,72,864	1/1:2,14:16:39.10:526,39,0	0/0:8,0:8:24.07:0,24,288
chr10	102751732	.	A	AACACAC	3777.29	PASS	AB=0.884;AC=39;AF=0.722;AN=54;BaseQRankSum=0.107;DP=496;FS=13.313;HRun=0;HaplotypeScore=142.6736;InbreedingCoeff=0.5037;MQ=62.49;MQ0=11;MQRankSum=-1.256;QD=9.54;ReadPosRankSum=-1.989;VQSLOD=1.8747;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:26:12.02:161,12,0	1/1:6,0:7:6.02:158,6,0	0/1:40,0:23:0:0,0,0	./.	0/0:12,0:12:12.04:0,12,221	1/1:17,1:21:5.95:169,6,0	1/1:29,0:32:6.49:142,6,0	1/1:17,0:16:15.93:326,16,0	1/1:17,0:17:3.22:67,3,0	0/0:14,0:15:18.06:0,18,298	0/0:9,0:9:6.02:0,6,121	0/0:7,0:7:2.96:0,3,60	1/1:6,2:12:3.01:78,3,0	1/1:17,0:18:9:170,9,0	1/1:13,2:18:9.50:271,10,0	0/1:12,0:17:48.31:90,0,48	1/1:26,0:28:24.55:542,25,0	1/1:12,0:13:15.01:286,15,0	1/1:17,0:15:12.04:261,12,0	1/1:11,0:10:6.01:99,6,0	1/1:18,0:20:15.05:311,15,0	1/1:5,0:8:6.02:141,6,0	1/1:17,0:17:3.01:78,3,0	0/1:19,0:22:28.54:68,0,29	1/1:13,2:18:6.49:175,6,0	0/0:10,0:10:9.48:0,9,102	1/1:15,0:15:11.04:186,11,0	0/0:6,0:7:12.04:0,12,223
chr10	102752767	.	G	GAA	13491.66	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=15.087;DP=605;FS=4.175;HRun=6;HaplotypeScore=119.1427;InbreedingCoeff=0.9989;MQ=58.61;MQ0=1;MQRankSum=-12.486;QD=42.97;ReadPosRankSum=-2.863;VQSLOD=2.8009;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:30:84.24:1373,84,0	1/1:3,8:11:27.09:450,27,0	0/0:24,0:19:31.17:0,31,348	0/0:15,0:14:23.30:0,23,253	0/0:28,0:28:75.23:0,75,915	1/1:1,15:15:45.15:736,45,0	1/1:2,16:18:51.16:835,51,0	0/0:23,0:23:63.18:0,63,756	1/1:8,12:20:48.11:729,48,0	0/0:29,0:30:74.96:0,75,890	0/0:10,0:10:21.06:0,21,256	0/0:21,0:21:60.17:0,60,716	1/1:4,15:21:60.20:984,60,0	1/1:2,21:23:66.23:1109,66,0	1/1:3,29:32:90.31:1514,90,0	0/0:28,0:28:81.25:0,81,978	1/1:6,13:18:45.15:757,45,0	1/1:6,21:27:66.18:1085,66,0	0/0:17,0:17:42.12:0,42,506	0/0:17,0:17:45.14:0,45,549	0/0:18,0:18:48.14:0,48,585	1/1:5,15:20:54.18:902,54,0	1/1:9,20:29:72.18:1134,72,0	1/1:6,11:17:36.08:558,36,0	1/1:7,24:31:84.16:1324,84,0	0/0:21,0:21:54.16:0,54,659	0/0:22,0:22:66.20:0,66,789	0/0:16,0:16:48.08:0,48,542
chr10	102752780	.	TA	T	4500.75	PASS	AB=0.625;AC=27;AF=0.482;AN=56;BaseQRankSum=15.048;DP=599;FS=0.720;HRun=12;HaplotypeScore=131.2871;InbreedingCoeff=0.9289;MQ=61.00;MQ0=2;MQRankSum=-11.694;QD=14.61;ReadPosRankSum=0.616;VQSLOD=4.0480;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,23:33:56.72:441,57,0	0/1:4,6:10:6.54:138,0,7	0/0:20,0:14:17.16:0,17,158	0/0:16,0:14:10.16:0,10,164	0/0:26,0:26:60.11:0,60,604	1/1:1,17:17:44.82:348,45,0	1/1:10,7:19:28.79:196,29,0	0/0:21,0:21:21.82:0,22,393	1/1:5,14:19:38.82:302,39,0	0/0:23,0:23:51.10:0,51,518	0/0:14,0:14:42.02:0,42,409	0/0:22,0:23:49.30:0,49,530	1/1:4,15:22:44.94:319,45,0	1/1:4,17:21:50.78:394,51,0	1/1:8,27:36:70.70:539,71,0	0/0:23,1:25:17.25:0,17,510	1/1:4,10:14:20.90:162,21,0	1/1:9,18:27:23.33:364,23,0	0/0:17,0:17:43.73:0,44,414	0/0:22,1:23:33.79:0,34,498	0/0:19,0:20:53.93:0,54,524	1/1:4,16:20:17.33:313,17,0	1/1:5,18:23:44.67:348,45,0	1/1:4,9:14:19.71:145,20,0	1/1:5,25:32:42.34:492,42,0	0/0:22,0:22:36.06:0,36,358	0/0:23,0:25:71.76:0,72,680	0/0:14,0:14:35.89:0,36,343
chr10	102755901	.	CAA	C	8309.57	PASS	AB=0.909;AC=29;AF=0.518;AN=56;BaseQRankSum=-0.969;DP=568;FS=8.228;HRun=10;HaplotypeScore=84.1661;InbreedingCoeff=0.9381;MQ=75.55;MQ0=3;MQRankSum=-3.893;QD=25.89;ReadPosRankSum=3.691;VQSLOD=4.4255;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,40:46:99:1137,102,0	1/1:2,5:7:15.03:167,15,0	0/0:16,0:13:21.08:0,21,274	0/0:20,0:18:21.99:0,22,265	0/0:24,0:25:62.66:0,63,891	1/1:2,19:21:54.14:602,54,0	1/1:2,21:23:57.15:634,57,0	0/0:4,0:24:47.90:0,48,176	1/1:2,27:28:69.18:769,69,0	0/0:19,0:19:45.15:0,45,690	0/0:13,0:13:27.09:0,27,427	0/0:15,0:15:30.10:0,30,476	1/1:2,11:13:30.08:334,30,0	1/1:1,18:19:48.13:535,48,0	1/1:2,13:15:36.09:401,36,0	0/0:16,0:18:44.11:0,44,610	1/1:0,28:29:74.90:814,75,0	1/1:2,21:23:60.15:669,60,0	0/0:3,0:12:25.14:0,25,88	0/0:3,0:16:27.45:0,27,94	0/0:2,0:19:34.93:0,35,120	1/1:4,13:17:39.09:435,39,0	1/1:2,19:21:44.85:501,45,0	1/1:1,22:23:60.16:669,60,0	1/1:4,21:25:57.15:636,57,0	0/0:28,0:28:78.27:0,78,1238	0/0:2,0:22:46.73:0,47,160	0/1:9,1:10:6.36:6,0,347
chr10	102756722	.	C	CAGAGA	18428.08	PASS	AB=0.938;AC=29;AF=0.518;AN=56;BaseQRankSum=-13.777;DP=503;FS=7.936;HRun=0;HaplotypeScore=83.0713;InbreedingCoeff=0.9217;MQ=78.20;MQ0=1;MQRankSum=-3.618;QD=62.89;ReadPosRankSum=5.187;VQSLOD=5.5728;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,48:57:99:3857,132,0	1/1:2,6:9:21.07:626,21,0	0/0:9,0:9:18.64:0,19,301	0/0:22,0:20:16.42:0,16,243	0/0:9,0:9:27.09:0,27,544	1/1:2,10:12:27.09:813,27,0	1/1:7,20:30:60.21:1802,60,0	0/0:27,0:27:63.18:0,63,1135	1/1:1,12:14:36.12:1078,36,0	0/0:14,0:14:36.11:0,36,689	0/0:12,0:12:33.11:0,33,665	0/0:12,0:12:33.11:0,33,664	1/1:3,8:11:24.08:721,24,0	1/1:3,9:12:24.08:693,24,0	1/1:1,18:19:51.13:1466,51,0	0/1:14,1:15:51.33:51,0,686	1/1:5,21:29:48.16:1447,48,0	1/1:5,8:13:24.08:723,24,0	0/0:17,0:17:39.12:0,39,745	0/0:11,0:11:27.56:0,28,516	0/0:26,0:25:69.24:0,69,1376	1/1:3,17:20:48.16:1444,48,0	1/1:4,16:20:42.14:1264,42,0	1/1:3,18:21:54.19:1628,54,0	1/1:1,10:11:27.09:813,27,0	0/0:29,0:29:84.29:0,84,1663	0/0:17,0:17:48.16:0,48,966	0/0:5,0:5:15.05:0,15,302
chr10	102756944	.	TACACACAC	T	3825.75	PASS	AB=0.692;AC=27;AF=0.500;AN=54;BaseQRankSum=8.905;DP=502;FS=16.197;HRun=0;HaplotypeScore=125.2722;InbreedingCoeff=0.7680;MQ=55.59;MQ0=7;MQRankSum=-9.156;QD=15.68;ReadPosRankSum=0.521;VQSLOD=1.8839;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,11:23:12.04:184,12,0	0/1:5,4:9:2.29:102,0,2	./.	0/0:25,0:19:15.01:0,15,149	0/0:18,0:18:33.06:0,33,855	1/1:8,12:19:18.06:340,18,0	1/1:9,9:19:9.02:139,9,0	0/0:18,0:17:18.48:0,18,329	1/1:3,13:16:11.87:235,12,0	0/0:20,0:22:36.08:0,36,1051	0/0:15,0:15:24.08:0,24,900	0/0:21,0:21:39.13:0,39,1485	1/1:8,13:21:23.38:605,23,0	1/1:4,11:15:2.07:281,2,0	1/1:7,14:22:24.08:564,24,0	0/0:21,0:21:48.12:0,48,1605	1/1:14,8:22:6.74:365,7,0	1/1:13,0:12:17.87:188,18,0	0/0:18,0:15:23.62:0,24,367	0/0:14,0:13:2.92:0,3,17	0/0:25,0:25:2.94:0,3,77	1/1:2,11:13:12.04:303,12,0	1/1:8,3:10:0.67:125,1,0	1/1:11,10:21:5.96:125,6,0	1/1:5,14:19:7.08:269,7,0	0/0:17,0:18:27.09:0,27,982	0/0:15,0:14:12.04:0,12,333	0/0:14,0:13:26.77:0,27,776
chr10	102757448	.	T	TG	2574.85	PASS	AB=0.625;AC=27;AF=0.482;AN=56;BaseQRankSum=0.265;DP=496;FS=18.877;HRun=9;HaplotypeScore=70.5836;InbreedingCoeff=0.8507;MQ=81.44;MQ0=0;MQRankSum=-0.054;QD=11.92;ReadPosRankSum=1.593;VQSLOD=1.4321;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,9:15:2.33:118,0,2	1/1:0,6:6:8.54:99,9,0	0/0:35,0:29:0.85:0,1,233	0/0:19,0:16:20.61:0,21,156	0/0:14,0:14:35.96:0,36,305	1/1:13,3:17:45.25:381,45,0	1/1:7,19:26:29.98:313,30,0	0/0:29,0:29:65.72:0,66,540	1/1:7,14:21:22:234,22,0	0/0:23,0:23:55.94:0,56,460	0/0:10,0:10:23.95:0,24,199	0/0:13,0:13:35.93:0,36,298	1/1:3,13:16:24.41:266,24,0	1/1:4,13:17:10.24:339,10,0	1/1:5,12:17:18.01:185,18,0	0/0:17,0:18:46.93:0,47,378	1/1:5,0:13:14.39:77,14,0	1/1:2,7:9:15.04:166,15,0	0/0:16,0:16:11.36:0,11,195	0/0:20,0:20:38.75:0,39,319	0/0:22,0:22:53.11:0,53,434	1/1:5,9:14:18.73:155,19,0	1/1:8,4:12:8.99:99,9,0	1/1:6,8:14:12.03:133,12,0	1/1:7,12:19:1.09:224,1,0	0/0:25,0:25:59.97:0,60,515	0/0:19,0:19:44.56:0,45,369	0/0:17,0:17:44.96:0,45,385
chr10	102760212	.	GAGGGAGGGAGGGAGAGAGGGGCAA	G	4765.09	PASS	AB=0.627;AC=27;AF=0.482;AN=56;BaseQRankSum=6.343;DP=521;FS=0.661;HRun=0;HaplotypeScore=226.8172;InbreedingCoeff=0.7399;MQ=64.45;MQ0=2;MQRankSum=-7.093;QD=16.96;ReadPosRankSum=2.947;VQSLOD=3.7993;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,22:37:8.69:417,0,9	1/1:7,0:7:12.02:217,12,0	0/0:18,0:14:21.05:0,21,523	0/0:20,0:16:20.46:0,20,413	0/0:16,0:16:38.94:0,39,2174	1/1:6,14:20:3.01:117,3,0	1/1:21,0:21:32.90:692,33,0	0/0:18,0:18:27.09:0,27,1070	1/1:8,11:19:6.02:307,6,0	0/0:19,0:19:39.13:0,39,2509	0/0:15,0:15:36.12:0,36,2619	0/0:19,0:19:38.49:0,38,2613	1/1:5,10:15:6.02:379,6,0	1/1:3,19:22:12.04:761,12,0	1/1:8,16:24:9.03:571,9,0	0/0:15,0:15:39.13:0,39,2387	1/1:8,15:23:2.94:18,3,0	1/1:2,12:14:3.01:190,3,0	0/0:13,0:12:21.07:0,21,873	0/0:8,0:8:21.07:0,21,1427	0/0:30,0:30:75.19:0,75,4368	1/1:5,15:20:3.01:189,3,0	1/1:6,15:21:2.92:110,3,0	1/1:4,16:20:9.03:563,9,0	1/1:4,14:18:6.02:234,6,0	0/0:22,0:22:60.20:0,60,3492	0/0:20,0:20:45.14:0,45,2803	0/0:7,0:7:12.04:0,12,710
chr10	102760228	.	GA	G	356.51	PASS	AB=0.750;AC=21;AF=0.389;AN=54;BaseQRankSum=6.800;DP=469;FS=3.305;HRun=1;HaplotypeScore=66.6085;InbreedingCoeff=0.6711;MQ=59.34;MQ0=2;MQRankSum=-6.960;QD=2.27;ReadPosRankSum=2.615;VQSLOD=-0.6025;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:0.75:0,1,71	1/1:5,1:6:11.99:103,12,0	0/0:19,0:8:24.01:0,24,266	0/0:27,0:17:30.27:0,30,309	0/0:16,0:16:41.95:0,42,536	1/1:15,0:15:3:26,3,0	0/1:14,7:21:99:216,0,150	0/0:21,0:21:60.18:0,60,865	1/1:11,0:11:5.37:34,5,0	0/0:19,0:19:51.16:0,51,755	0/0:16,0:16:45.15:0,45,704	0/0:14,0:14:39.60:0,40,610	1/1:11,0:11:4.41:14,4,0	1/1:20,0:20:9.49:33,9,0	1/1:16,0:16:7.11:25,7,0	0/0:21,0:21:60.20:0,60,924	./.	1/1:12,0:12:2.37:8,2,0	0/0:13,0:13:39.13:0,39,584	0/0:10,0:10:30.08:0,30,444	0/0:36,0:36:99:0,99,1495	1/1:15,0:15:2.04:7,2,0	0/0:15,0:15:3.01:0,3,45	1/1:16,0:16:5.50:16,6,0	1/1:14,0:14:5.99:51,6,0	0/0:22,0:22:66.22:0,66,998	0/0:18,0:18:54.16:0,54,793	0/0:5,0:5:15.05:0,15,233
chr10	102760233	.	GCAA	G	458.48	PASS	AB=0.811;AC=21;AF=0.375;AN=56;BaseQRankSum=8.373;DP=461;FS=2.559;HRun=0;HaplotypeScore=75.0597;InbreedingCoeff=0.5512;MQ=59.15;MQ0=2;MQRankSum=-7.120;QD=2.65;ReadPosRankSum=4.478;VQSLOD=1.1635;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:32.58:33,0,49	0/1:2,1:3:45.28:58,0,45	0/0:18,0:8:18.02:0,18,313	0/0:29,0:19:12.06:0,12,345	0/0:11,0:11:30.09:0,30,692	1/1:15,0:15:1.68:37,2,0	0/1:8,7:15:87.44:87,0,304	0/0:22,0:22:63.22:0,63,1510	1/1:11,0:11:5.99:61,6,0	0/0:18,0:18:51.18:0,51,1232	0/0:18,0:18:54.19:0,54,1264	0/0:14,0:14:42.12:0,42,984	1/1:11,0:11:5.93:40,6,0	1/1:20,0:20:11.90:85,12,0	1/1:16,0:16:8.93:64,9,0	0/0:23,0:23:69.24:0,69,1682	0/0:15,0:15:3.01:0,3,35	1/1:12,0:12:2.98:21,3,0	0/0:13,0:13:39.11:0,39,865	0/0:10,0:10:30.10:0,30,739	0/0:37,0:37:99:0,102,2431	1/1:15,0:15:2.96:20,3,0	0/0:15,0:15:2.93:0,3,52	1/1:16,0:16:8.85:56,9,0	1/1:14,0:14:6.02:79,6,0	0/0:19,0:19:57.20:0,57,1378	0/0:17,0:17:51.16:0,51,1205	0/0:5,0:5:15.05:0,15,369
chr10	102761711	.	GA	G	6214.41	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=13.865;DP=611;FS=2.614;HRun=3;HaplotypeScore=116.9810;InbreedingCoeff=0.9998;MQ=73.18;MQ0=1;MQRankSum=-2.549;QD=20.99;ReadPosRankSum=2.951;VQSLOD=4.3313;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,24:34:75.31:704,75,0	1/1:5,6:11:31.57:281,32,0	0/0:24,0:22:61.69:0,62,758	0/0:26,0:24:43.97:0,44,588	0/0:31,0:31:93.24:0,93,1259	1/1:1,15:16:39.02:367,39,0	1/1:7,16:23:52.23:457,52,0	0/0:15,0:15:35.16:0,35,232	1/1:4,15:19:49.89:438,50,0	0/0:29,0:29:81.15:0,81,1058	0/0:18,0:18:51.14:0,51,687	0/0:24,0:24:72.22:0,72,990	1/1:11,10:21:44.21:383,44,0	1/1:0,22:22:34.19:257,34,0	1/1:7,19:26:53.89:566,54,0	0/0:24,0:24:72.16:0,72,954	1/1:9,15:24:64.21:575,64,0	1/1:5,28:33:78.84:787,79,0	0/0:18,0:18:52.22:0,52,341	0/0:18,0:18:46.81:0,47,231	0/0:19,0:19:46.33:0,46,194	1/1:5,9:14:36.24:270,36,0	1/1:6,8:14:36.82:300,37,0	1/1:11,14:25:62.95:555,63,0	1/1:1,13:14:30:274,30,0	0/0:30,0:30:87.28:0,87,1217	0/0:23,0:23:47.65:0,48,238	0/0:16,0:16:48.16:0,48,678
chr10	102761720	.	GA	G	8642.08	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=12.624;DP=604;FS=0.000;HRun=2;HaplotypeScore=104.6697;InbreedingCoeff=0.9990;MQ=75.83;MQ0=1;MQRankSum=-2.829;QD=22.33;ReadPosRankSum=2.757;VQSLOD=4.8612;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:31:67.07:523,67,0	1/1:5,6:11:20.25:236,20,0	0/0:25,0:23:56.31:0,56,755	0/0:24,0:22:57.43:0,57,666	0/0:29,0:29:84.27:0,84,1161	1/1:9,12:21:56.69:459,57,0	1/1:5,16:21:50.58:378,51,0	1/1:7,11:18:53.99:578,54,0	1/1:3,15:19:49.37:395,49,0	0/0:29,0:29:87.26:0,87,1143	0/0:18,0:18:51.14:0,51,684	0/0:23,0:23:66.18:0,66,875	1/1:5,9:20:39.82:327,40,0	1/1:6,11:17:30.21:205,30,0	1/1:4,19:26:46.54:488,47,0	0/0:24,0:24:72.19:0,72,951	1/1:5,13:23:52.26:417,52,0	1/1:6,27:33:83.09:709,83,0	1/1:0,18:18:54.07:609,54,0	1/1:0,16:16:48.10:600,48,0	1/1:0,21:21:54.18:697,54,0	1/1:7,8:15:31.61:226,32,0	1/1:9,8:18:36.88:348,37,0	1/1:2,14:21:50.71:404,51,0	1/1:4,9:13:33.71:272,34,0	0/0:32,0:32:96.27:0,96,1270	1/1:0,25:25:60.19:772,60,0	0/0:13,0:13:36.12:0,36,506
chr10	102763184	.	CTT	C	7895.75	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=8.449;DP=308;FS=4.730;HRun=3;HaplotypeScore=39.8477;InbreedingCoeff=0.9505;MQ=90.48;MQ0=0;MQRankSum=-3.002;QD=39.48;ReadPosRankSum=4.836;VQSLOD=4.2256;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:57.19:872,57,0	1/1:0,4:4:12.04:183,12,0	0/0:13,0:14:19.53:0,20,644	0/0:13,0:13:39.07:0,39,567	0/0:2,0:2:6.02:0,6,116	1/1:0,8:8:24.08:367,24,0	1/1:1,23:24:57.19:873,57,0	0/0:12,0:12:33.11:0,33,609	1/1:1,11:12:33.11:505,33,0	0/0:8,0:8:24.03:0,24,395	0/0:5,0:5:15.01:0,15,252	0/0:7,0:7:21.07:0,21,406	1/1:1,8:9:21.07:321,21,0	1/1:0,13:13:33.11:505,33,0	1/1:0,16:16:33.11:505,33,0	0/0:4,0:4:12.04:0,12,232	1/1:3,24:27:69.23:1054,69,0	1/1:0,20:20:57.19:873,57,0	0/0:8,0:8:21.07:0,21,387	0/0:4,0:4:12.04:0,12,232	0/0:15,0:15:45.15:0,45,869	1/1:0,10:10:27.09:413,27,0	1/1:0,6:6:12.04:184,12,0	1/1:0,25:25:69.23:1056,69,0	1/1:0,5:5:12.04:183,12,0	0/0:8,0:8:24.08:0,24,434	0/0:4,0:4:12.03:0,12,201	0/0:4,0:4:12.03:0,12,199
chr10	102763553	.	T	TG	7313.98	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=0.827;DP=362;FS=1.109;HRun=2;HaplotypeScore=181.6135;InbreedingCoeff=0.2968;MQ=46.07;MQ0=0;MQRankSum=-2.392;QD=20.37;ReadPosRankSum=5.033;VQSLOD=4.8452;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,1:28:3.18:420,3,0	1/1:2,0:2:6:53,6,0	0/1:3,0:4:33.20:33,0,42	0/0:3,0:3:5.58:0,6,34	1/1:6,0:6:12.02:113,12,0	1/1:13,0:13:35.97:304,36,0	1/1:20,0:20:47.95:408,48,0	1/1:19,1:20:5.88:313,6,0	1/1:18,0:18:44.94:382,45,0	1/1:11,0:11:29.92:238,30,0	1/1:5,0:5:9:79,9,0	1/1:32,0:32:63.04:662,63,0	1/1:14,1:15:44.98:399,45,0	1/1:21,0:21:37.08:445,37,0	1/1:15,0:15:44.98:388,45,0	1/1:20,0:20:33.06:410,33,0	1/1:13,0:13:26.98:230,27,0	1/1:11,0:11:32.94:270,33,0	1/1:15,0:15:20.05:304,20,0	1/1:6,0:6:12:105,12,0	1/1:17,1:18:30.03:285,30,0	1/1:6,0:6:18.01:164,18,0	1/1:3,0:3:3:26,3,0	1/1:9,0:9:18.01:163,18,0	1/1:13,0:13:30.01:265,30,0	1/1:10,0:10:29.95:246,30,0	1/1:24,0:24:68.94:582,69,0	1/1:1,0:1:2.99:23,3,0
chr10	102763555	.	G	GT	13645.05	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=0.305;DP=372;FS=5.472;HRun=1;HaplotypeScore=163.3915;InbreedingCoeff=0.2855;MQ=48.07;MQ0=0;MQRankSum=-2.197;QD=36.98;ReadPosRankSum=2.462;VQSLOD=4.2475;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,23:28:60.17:843,60,0	1/1:1,2:3:6.02:90,6,0	0/1:5,0:5:27.32:27,0,46	0/0:2,0:3:1.49:0,1,26	1/1:2,5:7:15.04:204,15,0	1/1:2,12:14:36.12:538,36,0	1/1:4,16:20:54.13:756,54,0	1/1:5,16:21:52.88:762,53,0	1/1:2,18:20:51.09:709,51,0	1/1:2,10:12:33.07:468,33,0	1/1:1,4:5:9.03:129,9,0	1/1:2,29:31:84.24:1229,84,0	1/1:1,14:15:45.14:653,45,0	1/1:1,19:20:57.19:851,57,0	1/1:0,15:15:45.15:672,45,0	1/1:2,18:20:60.16:846,60,0	1/1:2,11:13:35.93:439,36,0	1/1:0,11:11:33.11:493,33,0	1/1:2,13:15:45.15:665,45,0	1/1:0,6:6:12.04:179,12,0	1/1:2,15:17:30.10:442,30,0	1/1:1,6:7:18.06:268,18,0	1/1:1,3:4:5.98:64,6,0	1/1:2,9:11:23.91:302,24,0	1/1:2,11:13:30.10:448,30,0	1/1:1,10:11:30.10:448,30,0	1/1:1,23:24:72.24:1074,72,0	1/1:0,1:1:3.01:45,3,0
chr10	102765461	.	G	GA	4332.90	PASS	AB=0.600;AC=25;AF=0.446;AN=56;BaseQRankSum=-9.885;DP=538;FS=3.240;HRun=11;HaplotypeScore=58.3653;InbreedingCoeff=0.7730;MQ=62.75;MQ0=9;MQRankSum=0.997;QD=17.61;ReadPosRankSum=1.746;VQSLOD=5.9647;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:26:30.82:478,31,0	1/1:1,3:4:8.05:67,8,0	0/0:12,0:8:18.74:0,19,121	0/0:21,0:8:13.60:0,14,106	0/0:34,0:34:99:0,102,789	1/1:8,10:18:18.76:350,19,0	0/1:5,12:17:4.02:124,0,4	0/0:26,1:25:32.10:0,32,424	1/1:2,9:12:20.88:197,21,0	0/0:26,0:26:52.73:0,53,394	0/0:27,0:28:73.62:0,74,553	0/0:15,0:15:35.83:0,36,277	1/1:2,12:14:15.84:342,16,0	1/1:3,11:14:27.05:274,27,0	1/1:6,11:17:12.83:309,13,0	0/0:13,0:13:28.91:0,29,215	1/1:10,27:37:19.43:559,19,0	1/1:4,28:32:45.90:645,46,0	0/0:18,1:20:28.37:0,28,390	0/0:25,0:24:34.07:0,34,375	0/0:10,0:10:26.88:0,27,209	1/1:2,13:15:33.07:335,33,0	0/1:4,10:14:21.99:159,0,22	1/1:0,14:14:36.07:365,36,0	0/1:5,7:12:45.67:128,0,46	0/0:28,2:31:9.83:0,10,430	0/0:17,1:18:14.39:0,14,295	0/0:12,0:12:32.83:0,33,251
chr10	102767343	.	TG	T	4277.98	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-1.580;DP=452;FS=5.669;HRun=10;HaplotypeScore=63.7340;InbreedingCoeff=0.9212;MQ=73.88;MQ0=0;MQRankSum=-1.125;QD=17.39;ReadPosRankSum=4.222;VQSLOD=5.5826;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,15:31:52.97:441,53,0	1/1:3,3:6:9:78,9,0	0/0:17,1:18:3.77:0,4,219	0/0:22,1:20:5.80:0,6,304	0/0:18,0:18:42.06:0,42,433	1/1:4,12:16:35.99:312,36,0	1/1:5,12:17:41.99:364,42,0	0/0:6,0:13:17.79:0,18,121	1/1:6,21:27:62.95:543,63,0	0/0:8,0:8:12.02:0,12,125	0/0:14,0:14:18.05:0,18,199	0/0:17,0:17:45.01:0,45,455	1/1:8,4:12:26.93:222,27,0	1/1:6,9:15:26.84:230,27,0	1/1:8,13:21:47.90:402,48,0	0/0:13,0:13:27.07:0,27,299	1/1:10,14:24:41.92:356,42,0	1/1:6,16:22:50.92:432,51,0	0/0:6,0:7:8.67:0,9,66	0/0:9,0:15:17.42:0,17,107	0/0:3,0:9:8.56:0,9,43	1/1:2,5:7:11.95:97,12,0	1/1:6,8:14:26.96:231,27,0	1/1:4,9:13:26.99:234,27,0	1/1:10,11:21:38.95:335,39,0	0/0:16,0:16:36.10:0,36,398	0/0:8,0:13:11.56:0,12,76	0/0:21,0:21:53.82:0,54,574
chr10	102767401	.	AT	A	2310.56	PASS	AB=0.870;AC=32;AF=0.571;AN=56;BaseQRankSum=2.320;DP=434;FS=1.426;HRun=15;HaplotypeScore=63.5583;InbreedingCoeff=0.4316;MQ=68.41;MQ0=14;MQRankSum=1.469;QD=7.58;ReadPosRankSum=4.112;VQSLOD=2.8576;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,23:30:63.25:397,63,0	1/1:1,4:6:10.88:64,11,0	0/1:15,0:8:1.66:2,0,25	0/0:15,0:10:8.40:0,8,45	0/0:16,1:20:10.21:0,10,174	1/1:4,5:9:14.75:96,15,0	1/1:3,9:11:23.64:154,24,0	0/0:18,1:18:8.98:0,9,194	1/1:12,6:18:28.98:176,29,0	0/1:19,3:21:6.97:7,0,306	0/0:10,0:10:14.79:0,15,117	0/0:19,0:20:38.81:0,39,314	1/1:2,11:13:9.18:185,9,0	1/1:3,7:10:26.60:173,27,0	1/1:7,12:18:41.23:266,41,0	0/0:13,1:13:19.60:0,20,273	1/1:8,14:21:9.79:267,10,0	0/1:12,6:18:13.19:133,0,13	0/0:17,1:18:4.38:0,4,244	0/1:17,2:18:32.07:32,0,238	0/1:4,1:4:7.28:7,0,64	0/0:11,0:12:22.80:0,23,188	1/1:7,10:18:8.10:172,8,0	1/1:4,3:7:11.77:74,12,0	1/1:6,13:19:43.35:272,43,0	0/1:16,2:19:13.38:13,0,117	0/1:7,1:8:1.22:1,0,114	0/1:9,2:11:14.54:15,0,130
chr10	102768299	.	A	AACACAC	4832.99	PASS	AB=0.854;AC=34;AF=0.630;AN=54;BaseQRankSum=-0.446;DP=676;FS=0.000;HRun=0;HaplotypeScore=141.9706;InbreedingCoeff=0.5907;MQ=66.67;MQ0=10;MQRankSum=-5.335;QD=11.14;ReadPosRankSum=-1.393;VQSLOD=3.1110;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,11:39:12.04:259,12,0	1/1:11,0:11:15.01:230,15,0	0/0:42,0:21:5.75:0,6,52	./.	0/0:20,0:23:18.05:0,18,309	1/1:14,0:21:5.14:190,5,0	1/1:18,10:33:6.02:189,6,0	0/1:17,0:17:1.90:52,0,2	1/1:13,6:20:21.07:577,21,0	0/0:29,0:30:31.75:0,32,455	0/0:14,0:14:20.93:0,21,282	0/0:19,0:19:30.05:0,30,533	1/1:13,0:14:18.04:344,18,0	1/1:11,8:23:3.01:95,3,0	1/1:17,12:33:18.53:522,19,0	1/1:8,0:21:15.05:274,15,0	1/1:16,11:33:36.12:933,36,0	1/1:9,0:24:5.18:133,5,0	0/1:12,0:12:15.61:16,0,104	0/1:9,0:20:49.16:49,0,68	0/0:16,0:30:15.22:0,15,147	1/1:11,7:28:18.06:470,18,0	1/1:6,9:18:8.62:268,9,0	1/1:20,8:32:2.89:97,3,0	1/1:10,2:14:6.02:135,6,0	0/1:14,0:20:1.05:1,0,285	0/0:11,0:18:12.92:0,13,190	0/0:12,0:14:18.05:0,18,316
chr10	102769077	.	A	AT	7826.13	PASS	AB=0.556;AC=27;AF=0.482;AN=56;BaseQRankSum=-13.940;DP=664;FS=6.496;HRun=10;HaplotypeScore=64.2126;InbreedingCoeff=0.9237;MQ=80.52;MQ0=0;MQRankSum=-2.721;QD=23.79;ReadPosRankSum=1.750;VQSLOD=5.6593;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,40:42:99:1119,105,0	1/1:2,13:15:36.56:385,37,0	0/0:18,0:19:32.69:0,33,263	0/0:16,0:16:32.94:0,33,271	0/0:25,0:25:62.90:0,63,517	0/1:4,16:20:22.81:397,0,23	1/1:2,20:22:29.49:519,29,0	0/0:26,0:26:58.30:0,58,470	1/1:4,21:25:54.14:576,54,0	0/0:28,0:28:74.81:0,75,610	0/0:18,0:18:53.94:0,54,443	0/0:25,0:25:59.91:0,60,493	1/1:5,17:22:48.12:512,48,0	1/1:8,18:26:49.23:497,49,0	1/1:2,22:24:48.12:512,48,0	0/0:28,0:28:65.90:0,66,542	1/1:5,13:18:36.09:384,36,0	1/1:2,11:13:11.45:327,11,0	0/0:30,0:31:76.94:0,77,622	0/0:36,1:37:64.74:0,65,726	0/0:22,0:22:53.91:0,54,443	1/1:3,24:27:60.62:641,61,0	1/1:2,21:23:35.51:584,36,0	1/1:6,23:29:66.16:702,66,0	1/1:1,22:23:63.16:672,63,0	0/0:25,0:25:65.90:0,66,542	0/0:25,0:26:67.87:0,68,538	0/0:9,0:9:26.97:0,27,222
chr10	102769477	.	T	TG	2878.95	PASS	AB=0.560;AC=25;AF=0.463;AN=54;BaseQRankSum=-4.796;DP=339;FS=8.607;HRun=8;HaplotypeScore=39.3080;InbreedingCoeff=0.7947;MQ=72.09;MQ0=1;MQRankSum=-3.418;QD=16.27;ReadPosRankSum=1.281;VQSLOD=2.5958;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,18:24:0.09:250,0,0	./.	0/0:10,0:9:0.93:0,1,62	0/0:12,0:9:12.65:0,13,181	0/0:9,0:9:18:0,18,164	1/1:4,4:8:12.04:138,12,0	1/1:1,23:24:39.05:434,39,0	0/0:16,0:16:23.68:0,24,218	1/1:1,10:11:18.05:206,18,0	0/0:13,0:13:27:0,27,247	0/0:12,0:13:26.05:0,26,225	0/0:8,0:8:16.75:0,17,161	1/1:2,10:12:21.06:241,21,0	0/1:3,11:14:9.41:155,0,9	1/1:4,11:15:29.91:346,30,0	0/0:5,0:5:8.98:0,9,77	1/1:2,16:18:29.78:346,30,0	1/1:2,6:8:12.04:138,12,0	0/0:8,0:8:2.99:0,3,27	0/0:12,0:12:23.78:0,24,214	0/0:17,0:19:38.05:0,38,335	1/1:1,6:7:15.04:173,15,0	1/1:4,8:12:15.04:173,15,0	1/1:2,13:15:33.10:381,33,0	1/1:2,7:9:9.03:104,9,0	0/0:15,0:15:39.01:0,39,357	0/0:13,0:14:37.83:0,38,333	0/0:7,0:7:12:0,12,110
chr10	102770124	.	A	ATTTGTGAGAGAGTGTGTATT	35015.37	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=9.813;DP=917;FS=42.197;HRun=0;HaplotypeScore=393.4830;InbreedingCoeff=0.8694;MQ=55.77;MQ0=0;MQRankSum=-17.787;QD=55.06;ReadPosRankSum=-1.362;VQSLOD=2.6767;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:39.02:1431,39,0	1/1:11,0:11:12.04:602,12,0	0/0:44,0:44:83.91:0,84,2334	0/0:35,0:33:66.18:0,66,1830	0/0:25,0:25:63.22:0,63,2727	1/1:26,0:26:27.09:1258,27,0	1/1:39,0:39:81.17:2673,81,0	1/1:53,0:53:99:3998,117,0	1/1:39,0:39:54.18:2813,54,0	0/0:49,0:49:99:0,102,4648	0/0:30,0:30:69.22:0,69,3142	0/0:40,0:40:94.63:0,95,4170	1/1:41,0:41:54.18:3366,54,0	1/1:27,0:27:36.12:1844,36,0	1/1:43,0:43:54.18:2604,54,0	0/1:42,0:42:99:150,0,5032	1/1:18,0:18:6.02:354,6,0	1/1:23,0:23:9.44:840,9,0	1/1:21,0:21:38.48:1028,38,0	1/1:23,19:48:47.83:1714,48,0	1/1:21,0:21:5.97:189,6,0	1/1:29,0:29:29.85:1065,30,0	1/1:32,0:32:45.14:2202,45,0	1/1:30,0:30:20.91:951,21,0	1/1:31,0:31:45.15:2488,45,0	0/0:38,0:38:81.26:0,81,3510	1/1:35,0:35:51.18:3448,51,0	0/0:19,0:19:33.11:0,33,1470
chr10	102770126	.	T	TTGTGAGAGAGTGTGTATTTG	39611.58	PASS	AB=0.956;AC=39;AF=0.696;AN=56;BaseQRankSum=2.386;DP=1022;FS=41.958;HRun=0;HaplotypeScore=393.1575;InbreedingCoeff=0.8921;MQ=57.11;MQ0=0;MQRankSum=-16.668;QD=53.60;ReadPosRankSum=-1.874;VQSLOD=2.7772;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:28:41.97:1648,42,0	1/1:4,6:17:17.97:690,18,0	0/0:47,0:46:86.93:0,87,2382	0/0:35,0:33:64:0,64,1863	0/0:24,0:24:63.22:0,63,2747	1/1:12,13:32:27.09:1343,27,0	1/1:26,0:41:84.18:3085,84,0	1/1:31,0:58:99:4960,132,0	1/1:17,21:46:54.18:3021,54,0	0/0:49,0:49:99:0,108,4778	0/0:30,0:30:69.24:0,69,3163	0/0:38,0:38:95.63:0,96,4240	1/1:21,18:47:54.18:3655,54,0	1/1:16,11:32:36.12:1978,36,0	1/1:19,21:52:54.18:2754,54,0	0/1:41,2:43:99:167,0,5063	1/1:10,6:29:6.02:389,6,0	1/1:19,0:26:24.33:1164,24,0	1/1:12,0:19:36.10:1236,36,0	1/1:45,1:46:50.98:1901,51,0	1/1:21,0:22:12.03:447,12,0	1/1:13,16:42:41.89:1343,42,0	1/1:14,16:39:45.14:2369,45,0	1/1:17,14:43:20.90:1017,21,0	1/1:16,14:42:45.15:2678,45,0	0/0:40,0:40:84.26:0,84,3599	1/1:17,17:35:54.13:3766,54,0	0/0:20,0:20:33.11:0,33,1504
chr10	102770217	.	C	CTG	438.61	PASS	AB=0.979;AC=26;AF=0.464;AN=56;BaseQRankSum=5.300;DP=704;FS=4.671;HRun=0;HaplotypeScore=162.1796;InbreedingCoeff=0.4125;MQ=52.01;MQ0=24;MQRankSum=-1.923;QD=1.22;ReadPosRankSum=0.955;VQSLOD=2.6030;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:5.95:36,6,0	0/1:8,0:7:0.06:0,0,0	0/0:50,0:18:44.39:0,44,510	0/0:56,0:32:77.35:0,77,1063	0/0:24,0:24:58.06:0,58,816	0/1:15,0:14:4.39:4,0,16	1/1:29,0:27:7.41:33,7,0	1/1:30,0:26:2.42:70,2,0	1/1:17,0:17:0.11:20,0,0	0/0:42,0:40:99:0,103,1507	0/0:18,0:16:30.05:0,30,424	0/0:24,0:24:45.02:0,45,566	1/1:17,1:18:11.59:117,12,0	1/1:19,0:19:7.71:71,8,0	1/1:23,1:23:0.13:1,0,0	0/0:30,0:29:72.19:0,72,990	0/0:24,0:23:4.80:0,5,38	0/1:15,0:15:21.02:41,0,21	0/0:17,0:17:4.20:0,4,18	1/1:20,0:20:0.32:2,0,0	1/1:39,0:39:9.38:61,9,0	0/1:26,0:25:20.91:47,0,21	1/1:15,0:15:1.40:4,1,0	0/1:36,2:36:12.62:75,0,13	0/1:23,2:25:2.53:20,0,3	0/0:32,0:32:88.61:0,89,1202	0/0:14,0:12:5.11:0,5,14	0/0:13,0:13:24.51:0,25,286
chr10	102772509	.	TACATACACACACACATACAC	T	7373.67	PASS	AB=0.533;AC=33;AF=0.635;AN=52;BaseQRankSum=7.355;DP=774;FS=2.542;HRun=0;HaplotypeScore=289.3647;InbreedingCoeff=0.8697;MQ=57.16;MQ0=6;MQRankSum=-6.612;QD=17.39;ReadPosRankSum=0.378;VQSLOD=3.2183;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,38:50:9.03:265,9,0	1/1:8,0:8:9.01:146,9,0	0/0:29,0:20:36.10:0,36,611	0/0:42,0:27:36.88:0,37,650	0/0:26,0:26:63.18:0,63,3188	1/1:4,17:20:15.05:584,15,0	1/1:26,0:26:45.03:722,45,0	1/1:16,20:36:59.93:785,60,0	1/1:5,13:18:3.01:92,3,0	0/0:50,0:50:99:0,117,7358	0/0:20,0:20:54.15:0,54,2646	0/0:46,0:46:99:0,120,7279	1/1:4,24:28:9.03:411,9,0	1/1:6,27:33:18.06:782,18,0	1/1:10,25:35:11.62:361,12,0	0/0:33,0:31:81.25:0,81,4508	1/1:15,1:16:11.91:238,12,0	1/1:21,2:23:19.87:927,20,0	1/1:5,4:5:8.06:165,8,0	1/1:12,2:14:12.03:238,12,0	1/1:66,0:65:42.13:940,42,0	1/1:7,5:12:9.03:182,9,0	0/1:2,14:16:0:0,0,0	./.	./.	0/0:43,0:43:99:0,102,6063	1/1:13,0:13:24.08:535,24,0	0/0:6,0:6:9.03:0,9,845
chr10	102772648	.	G	GCGCACACACACACACA	6297.14	PASS	AB=0.866;AC=18;AF=0.321;AN=56;BaseQRankSum=0.610;DP=811;FS=5.175;HRun=0;HaplotypeScore=278.0695;InbreedingCoeff=0.1103;MQ=47.48;MQ0=19;MQRankSum=-7.056;QD=17.79;ReadPosRankSum=-2.294;VQSLOD=2.8449;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:90.60:91,0,101	0/1:15,0:15:99:299,0,109	0/0:65,0:16:42:0,42,471	0/0:67,0:30:48.75:0,49,632	0/0:27,0:30:81.15:0,81,2363	0/0:20,0:19:10.75:0,11,116	0/1:29,0:29:99:136,0,217	1/1:35,0:29:74.38:1419,74,0	0/1:24,0:24:42.76:43,0,175	0/0:31,0:37:99:0,108,3111	0/0:19,0:20:57.15:0,57,2176	0/0:40,0:42:99:0,120,4239	0/1:18,0:22:99:406,0,148	0/1:20,0:28:99:100,0,127	0/1:16,0:22:77.41:199,0,77	0/0:18,0:24:66.22:0,66,2710	0/1:16,1:24:38.15:832,0,38	0/1:11,0:22:99:892,0,129	1/1:20,0:16:35.92:643,36,0	0/0:10,10:22:1.30:0,1,2	1/1:16,12:45:0.73:223,1,0	0/0:20,0:26:15.36:0,15,122	0/0:9,0:10:0.47:0,0,1	0/1:19,0:21:45.39:45,0,78	0/0:30,0:36:14.17:0,14,126	0/0:34,0:35:96.23:0,96,3269	1/1:2,12:18:14.77:970,15,0	0/0:21,0:21:29.03:0,29,2034
chr10	102773225	.	GAC	G	209.77	PASS	AB=0.998;AC=15;AF=0.268;AN=56;BaseQRankSum=11.046;DP=1051;FS=4.594;HRun=0;HaplotypeScore=313.8744;InbreedingCoeff=-0.2068;MQ=46.42;MQ0=42;MQRankSum=-7.936;QD=0.38;ReadPosRankSum=2.112;VQSLOD=1.9540;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:60,0:60:11.82:12,0,42	0/1:12,0:12:14.28:14,0,22	0/0:38,0:6:17.98:0,18,220	0/0:36,1:7:4.08:0,4,233	0/0:14,0:15:39.13:0,39,649	0/0:25,0:25:2.30:0,2,44	0/0:36,0:35:3:0,3,25	0/0:26,0:12:17.84:0,18,140	0/1:59,0:55:55.96:56,0,142	0/0:45,0:45:77.34:0,77,1894	0/0:23,0:23:57.19:0,57,921	0/0:62,1:61:99:0,121,2456	0/1:30,0:30:0.19:0,0,42	0/1:49,1:49:63.97:64,0,109	0/1:54,0:50:60.85:61,0,92	0/0:54,0:53:99:0,129,2052	0/1:25,0:24:21.63:22,0,83	0/1:31,0:30:37.66:38,0,79	0/0:17,0:13:3.66:0,4,105	0/1:23,0:23:11.08:11,0,48	0/1:110,0:107:5.87:6,0,163	1/1:33,0:33:11.46:41,11,0	0/1:24,0:23:5:5,0,43	0/0:61,0:61:3.43:0,3,14	0/1:23,0:23:17.38:17,0,52	0/0:36,2:37:22.88:0,23,1354	0/1:25,0:25:10.90:11,0,41	0/0:14,0:13:33.11:0,33,520
chr10	102773229	.	C	CACACACACACAT	18862.89	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-1.373;DP=1102;FS=4.636;HRun=0;HaplotypeScore=374.8070;InbreedingCoeff=0.9262;MQ=47.42;MQ0=31;MQRankSum=-4.469;QD=24.25;ReadPosRankSum=-2.612;VQSLOD=2.2459;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,44:76:8.32:564,8,0	1/1:8,0:12:19.32:602,19,0	0/0:35,0:6:11.94:0,12,165	0/0:33,0:7:19.81:0,20,247	0/0:17,0:17:42.13:0,42,1352	1/1:22,1:23:32.57:810,33,0	1/1:13,24:49:5.60:66,6,0	1/1:24,0:13:15.05:441,15,0	1/1:48,9:56:73.39:1982,73,0	0/0:49,0:49:95.64:0,96,3408	0/0:22,0:22:35.39:0,35,1484	0/0:60,0:59:99:0,165,4734	1/1:4,24:36:8.85:537,9,0	1/1:41,7:49:61.13:2175,61,0	1/1:37,11:50:72.03:2952,72,0	0/0:56,0:55:58.23:0,58,3623	1/1:23,1:23:31.77:622,32,0	1/1:27,1:27:42.10:1013,42,0	1/1:7,11:18:42.14:1535,42,0	1/1:21,3:24:24.98:871,25,0	1/1:113,0:110:68.89:1280,69,0	1/1:3,31:39:12.59:887,13,0	1/1:16,3:20:14.29:502,14,0	1/1:11,50:69:5.51:182,6,0	1/1:16,4:21:27.84:1101,28,0	0/0:39,0:38:90.28:0,90,2399	1/1:1,22:27:15.05:740,15,0	0/0:13,0:13:24.08:0,24,766
chr10	102773319	.	T	TAC	24305.18	PASS	AB=0.688;AC=35;AF=0.625;AN=56;BaseQRankSum=-13.711;DP=1199;FS=21.015;HRun=0;HaplotypeScore=210.8783;InbreedingCoeff=0.7836;MQ=52.08;MQ0=47;MQRankSum=3.568;QD=27.65;ReadPosRankSum=4.973;VQSLOD=3.9561;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,35:56:96.26:1645,96,0	1/1:2,14:16:32.98:571,33,0	0/0:48,0:9:21.03:0,21,257	0/0:40,0:8:21.05:0,21,249	0/0:25,0:25:60.20:0,60,798	1/1:3,19:22:33.11:571,33,0	0/1:24,11:35:47.65:646,0,48	1/1:12,7:11:18.02:280,18,0	1/1:8,52:60:90.17:1558,90,0	0/0:47,0:44:99:0,114,1490	0/0:22,0:21:54.16:0,54,701	0/0:53,1:54:77.42:0,77,1584	1/1:13,27:38:74.08:1472,74,0	1/1:4,57:60:99:1938,114,0	1/1:8,57:65:99:1766,102,0	0/0:52,1:53:28.52:0,29,1571	1/1:7,38:45:66.99:1143,67,0	0/1:5,29:34:15.63:966,0,16	0/1:9,4:8:3.62:216,0,4	1/1:2,30:32:42.05:727,42,0	1/1:37,134:171:99:4009,207,0	1/1:16,21:37:93.30:1557,93,0	1/1:5,34:39:75.49:1299,75,0	1/1:21,48:67:99:1968,114,0	1/1:5,27:33:65.93:1238,66,0	0/0:28,0:27:63.18:0,63,810	1/1:9,14:22:45.13:734,45,0	0/0:3,0:3:9.03:0,9,120
chr10	102773453	.	TACACACACACACACACACACACACACACACAC	T	6793.06	PASS	AB=1.000;AC=22;AF=0.423;AN=52;BaseQRankSum=-1.851;DP=727;FS=7.349;HRun=0;HaplotypeScore=448.8179;InbreedingCoeff=0.6408;MQ=44.96;MQ0=46;MQRankSum=-7.113;QD=22.57;ReadPosRankSum=-9.268;VQSLOD=0.3698;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:32:41.66:963,42,0	1/1:11,0:9:12.03:309,12,0	./.	0/0:32,0:4:10.06:0,10,153	0/0:22,0:22:42.14:0,42,3222	0/1:17,0:16:48.34:584,0,48	1/1:13,0:13:9.50:235,10,0	0/0:29,0:22:30.57:0,31,1078	1/1:23,0:23:20.27:786,20,0	0/0:26,0:26:63.22:0,63,3625	0/0:16,0:16:27.09:0,27,1893	0/0:28,0:27:48.14:0,48,2288	1/1:21,0:20:14.99:317,15,0	1/1:27,0:24:34.93:985,35,0	1/1:25,0:23:12.04:399,12,0	0/0:22,0:36:58.08:0,58,3434	1/1:22,0:22:18.06:634,18,0	0/1:21,0:21:26.54:724,0,27	0/0:15,0:12:21.07:0,21,710	0/0:14,0:29:39.61:0,40,1738	0/0:64,0:61:73.26:0,73,3984	1/1:15,23:38:7.03:92,7,0	./.	0/1:27,0:25:18.93:208,0,19	0/1:23,0:23:67.37:556,0,67	0/0:27,0:26:63.21:0,63,3027	0/0:15,0:30:35.43:0,35,1238	0/0:11,0:8:18.06:0,18,1072
chr10	102773476	.	A	ATG	5216.71	PASS	AB=0.778;AC=25;AF=0.463;AN=54;BaseQRankSum=10.512;DP=638;FS=22.734;HRun=0;HaplotypeScore=159.1225;InbreedingCoeff=0.9102;MQ=46.64;MQ0=27;MQRankSum=-6.270;QD=23.71;ReadPosRankSum=2.362;VQSLOD=3.8295;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,8:27:48.12:583,48,0	1/1:7,3:8:21.06:295,21,0	0/0:11,0:6:9.02:0,9,116	0/0:17,0:11:30.10:0,30,444	0/0:27,0:27:66.21:0,66,964	1/1:19,0:18:23.41:359,23,0	1/1:16,0:16:36.12:513,36,0	0/0:18,0:15:45.15:0,45,613	1/1:19,2:21:44.63:575,45,0	0/0:38,0:36:99:0,105,1483	0/0:32,0:31:69.19:0,69,985	0/0:35,0:33:80.06:0,80,1141	1/1:1,10:11:8.80:123,9,0	1/1:23,3:25:68.66:900,69,0	1/1:16,0:14:39.11:510,39,0	0/0:42,0:39:25.46:0,25,800	1/1:11,3:14:31.21:350,31,0	1/1:4,6:10:27.95:413,28,0	0/0:15,0:13:36:0,36,447	0/0:32,0:30:44.78:0,45,521	0/0:59,0:57:99:0,111,1519	1/1:24,0:24:2.88:34,3,0	./.	1/1:10,2:10:11.76:143,12,0	0/1:10,4:14:0.95:420,0,1	0/0:28,0:26:72.68:0,73,1002	0/0:25,0:24:29.77:0,30,282	0/0:19,0:15:39.13:0,39,586
chr10	102776934	.	GA	G	11977.41	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=4.971;DP=728;FS=7.327;HRun=5;HaplotypeScore=80.6583;InbreedingCoeff=0.9978;MQ=85.24;MQ0=0;MQRankSum=-2.184;QD=30.40;ReadPosRankSum=4.162;VQSLOD=5.3608;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,47:49:99:1565,138,0	1/1:0,5:5:15.04:170,15,0	0/0:24,0:24:63.16:0,63,817	0/0:22,0:22:57.18:0,57,725	0/0:19,0:19:54.18:0,54,739	1/1:0,15:15:45.13:510,45,0	1/1:4,23:27:60.17:681,60,0	0/0:33,0:33:84.23:0,84,1100	1/1:0,33:33:99:1123,99,0	0/0:22,0:22:66.17:0,66,857	0/0:11,0:11:33.11:0,33,451	0/0:24,0:24:69.21:0,69,915	1/1:3,17:20:44.96:510,45,0	1/1:0,26:26:66.19:749,66,0	1/1:2,22:24:66.19:749,66,0	0/0:21,0:21:57.18:0,57,765	1/1:3,50:53:99:1531,135,0	1/1:1,38:39:99:1225,108,0	0/0:32,0:32:87.28:0,87,1170	0/0:19,0:19:51.17:0,51,697	0/0:37,0:37:99:0,105,1404	1/1:1,22:23:63.18:715,63,0	1/1:0,16:16:48.14:544,48,0	1/1:2,35:37:99:1123,99,0	1/1:1,26:27:69.20:783,69,0	0/0:26,0:26:72.24:0,72,985	0/0:33,0:33:96.31:0,96,1297	0/0:11,0:11:33.10:0,33,437
chr10	102778713	.	AAC	A	285.22	PASS	AB=0.954;AC=16;AF=0.308;AN=52;BaseQRankSum=3.405;DP=513;FS=8.410;HRun=0;HaplotypeScore=70.3870;InbreedingCoeff=-0.2376;MQ=71.15;MQ0=11;MQRankSum=1.129;QD=1.04;ReadPosRankSum=1.421;VQSLOD=0.0256;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:21.05:0,21,274	0/0:7,0:7:3.01:0,3,38	./.	./.	0/0:9,0:8:9.03:0,9,134	0/0:19,0:19:9.03:0,9,125	0/1:16,4:20:20.49:20,0,101	0/0:20,0:20:9.03:0,9,121	0/1:12,0:13:5.12:5,0,80	0/1:16,0:16:5.19:5,0,94	0/1:9,0:8:21.74:22,0,31	0/1:13,0:13:12.99:13,0,122	0/0:6,0:6:6.02:0,6,89	0/1:11,1:12:20.48:20,0,121	0/1:13,0:13:23.49:23,0,80	0/0:12,0:12:9.03:0,9,134	0/1:18,0:23:0.75:45,0,1	0/1:28,0:26:48.40:48,0,157	0/1:10,1:11:26.15:26,0,38	0/0:15,0:15:12.03:0,12,156	0/1:33,0:33:34.85:35,0,212	0/0:11,0:11:12.04:0,12,161	0/1:12,0:12:5.74:6,0,96	0/1:41,3:44:64.32:64,0,590	0/1:20,0:20:20.47:20,0,122	0/0:25,0:25:14.98:0,15,153	0/0:14,0:14:17.75:0,18,209	1/1:5,2:8:8.86:79,9,0
chr10	102779104	.	GA	G	2608.91	PASS	AB=0.758;AC=33;AF=0.635;AN=52;BaseQRankSum=-1.392;DP=396;FS=17.026;HRun=8;HaplotypeScore=92.9814;InbreedingCoeff=0.5056;MQ=46.45;MQ0=12;MQRankSum=-0.269;QD=9.45;ReadPosRankSum=3.831;VQSLOD=0.7981;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,10:18:4.21:130,4,0	1/1:1,5:6:6.48:59,6,0	./.	./.	0/0:20,0:20:46:0,46,522	1/1:7,7:13:13.89:161,14,0	1/1:11,6:15:10.48:208,10,0	0/1:11,10:20:10.54:248,0,11	1/1:4,5:9:13.50:142,14,0	0/0:19,0:18:36.11:0,36,432	0/0:14,0:13:33.07:0,33,360	0/0:16,0:16:34.89:0,35,381	1/1:4,5:9:11.23:114,11,0	0/1:10,3:12:15.67:84,0,16	0/1:6,3:9:14.71:21,0,15	0/0:15,0:15:41.95:0,42,441	1/1:11,21:32:24.22:329,24,0	1/1:9,4:12:6.11:106,6,0	1/1:6,12:17:25.14:315,25,0	0/1:7,5:11:60.64:61,0,79	1/1:5,5:11:11.99:114,12,0	1/1:10,4:14:9:106,9,0	1/1:7,7:12:23.24:231,23,0	1/1:5,8:13:14.84:144,15,0	1/1:11,8:16:7.92:185,8,0	0/0:15,0:15:24.07:0,24,290	0/1:9,2:10:24.79:42,0,25	0/0:16,0:14:39.09:0,39,455
chr10	102779115	.	ACC	A	3062.78	PASS	AB=0.923;AC=22;AF=0.393;AN=56;BaseQRankSum=5.379;DP=429;FS=121.272;HRun=2;HaplotypeScore=76.8848;InbreedingCoeff=-0.3282;MQ=46.78;MQ0=14;MQRankSum=-4.397;QD=10.31;ReadPosRankSum=-0.803;VQSLOD=-0.0533;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,1:19:99:316,0,256	0/1:8,0:7:2.92:3,0,113	0/1:7,1:2:0:0,0,0	0/0:9,0:3:2.09:0,2,23	0/0:17,0:17:44.84:0,45,608	0/1:16,4:19:99:313,0,229	0/1:12,1:11:83.52:84,0,272	0/1:24,0:24:53.10:178,0,53	0/1:11,0:11:87.56:88,0,287	0/0:23,0:21:62.92:0,63,865	0/0:16,0:15:17.92:0,18,514	0/0:17,0:17:47.17:0,47,603	0/1:8,0:8:78.48:78,0,201	0/1:9,3:11:67.69:164,0,68	0/1:7,3:10:99:211,0,99	0/0:14,0:14:34.66:0,35,531	0/1:28,1:28:99:185,0,436	0/1:12,2:13:99:141,0,190	0/1:21,0:20:38.99:147,0,39	0/1:16,0:15:53.61:164,0,54	1/1:7,0:7:7.75:53,8,0	0/1:12,1:12:53.42:283,0,53	0/1:17,1:15:99:252,0,241	0/1:11,1:12:59.70:60,0,123	0/1:15,5:17:99:343,0,197	0/0:16,0:16:43.62:0,44,606	1/1:10,1:9:7.82:162,8,0	0/0:20,0:17:48.16:0,48,702
chr10	102780009	.	CCAAA	C	12130.75	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=12.212;DP=533;FS=3.944;HRun=0;HaplotypeScore=102.8163;InbreedingCoeff=0.9950;MQ=83.08;MQ0=0;MQRankSum=-5.250;QD=47.95;ReadPosRankSum=5.195;VQSLOD=5.7032;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:69.24:1337,69,0	1/1:1,6:7:12.04:233,12,0	0/0:24,0:23:45.89:0,46,1166	0/0:20,0:18:40.69:0,41,738	0/0:12,0:12:36.12:0,36,951	1/1:0,17:17:45.15:872,45,0	1/1:0,25:25:51.17:988,51,0	0/0:22,0:22:60.20:0,60,1578	1/1:1,18:19:48.16:930,48,0	0/0:16,0:16:48.16:0,48,1306	0/0:19,0:19:57.20:0,57,1454	0/0:24,0:24:66.21:0,66,1647	1/1:1,12:13:36.12:674,36,0	1/1:0,21:21:57.20:1105,57,0	1/1:0,12:12:33.11:640,33,0	0/0:21,0:20:63.22:0,63,1687	1/1:0,25:25:66.23:1279,66,0	1/1:2,22:24:57.20:1102,57,0	0/0:22,0:22:66.22:0,66,1694	0/0:17,0:17:48.13:0,48,1242	0/0:23,0:23:69.22:0,69,1822	1/1:1,24:25:60.21:1161,60,0	1/1:0,10:10:20.42:383,20,0	1/1:0,13:13:36.12:698,36,0	1/1:2,13:15:39.13:730,39,0	0/0:28,0:28:78.27:0,78,2127	0/0:21,0:21:63.21:0,63,1651	0/0:11,0:11:30.10:0,30,813
chr10	102781707	.	CT	C	3136.65	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=10.487;DP=474;FS=7.267;HRun=10;HaplotypeScore=72.4414;InbreedingCoeff=0.9232;MQ=82.21;MQ0=1;MQRankSum=-1.079;QD=10.25;ReadPosRankSum=2.014;VQSLOD=2.6126;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:52.95:151,53,0	1/1:7,0:7:12.22:35,12,0	0/0:23,1:20:0.14:0,0,169	0/0:14,0:13:16.84:0,17,159	0/0:20,0:20:57.12:0,57,618	1/1:18,0:18:26.47:77,26,0	1/1:9,0:9:14.26:41,14,0	1/1:1,27:28:80.97:699,81,0	1/1:12,0:12:22.41:65,22,0	0/0:27,0:27:63.63:0,64,684	0/0:16,0:16:39.09:0,39,420	0/0:12,1:13:10.03:0,10,330	1/1:10,0:10:16.30:47,16,0	1/1:7,0:7:8.15:24,8,0	1/1:16,0:16:24.44:71,24,0	0/0:10,0:10:24.06:0,24,265	1/1:18,0:18:28.51:82,29,0	1/1:17,0:17:26.48:77,26,0	1/1:4,21:25:62.90:535,63,0	1/1:1,20:21:56.90:485,57,0	1/1:0,13:13:32.99:287,33,0	1/1:9,0:9:16.30:48,16,0	1/1:15,0:15:24.31:71,24,0	1/1:11,0:11:16.29:47,16,0	1/1:16,0:16:20.37:59,20,0	0/0:23,0:23:60.15:0,60,657	1/1:3,21:24:50.99:443,51,0	0/0:20,1:21:31.08:0,31,562
chr10	102781716	.	TTA	T	6502.79	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-1.947;DP=454;FS=8.243;HRun=0;HaplotypeScore=69.2218;InbreedingCoeff=0.9926;MQ=80.83;MQ0=1;MQRankSum=-0.870;QD=35.15;ReadPosRankSum=5.457;VQSLOD=6.6701;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:78.26:1113,78,0	1/1:0,6:6:18.06:256,18,0	0/0:19,0:15:34.68:0,35,398	0/0:14,0:13:21.50:0,22,279	0/0:19,0:19:57.20:0,57,1049	1/1:0,14:14:39.13:557,39,0	1/1:1,8:9:21.04:279,21,0	0/0:28,0:28:58.89:0,59,389	1/1:0,12:12:33.11:471,33,0	0/0:28,0:28:81.71:0,82,1309	0/0:14,0:14:42.13:0,42,750	0/0:12,0:12:35.99:0,36,606	1/1:0,9:9:24.08:343,24,0	1/1:0,5:5:12.04:171,12,0	1/1:0,13:13:36.12:514,36,0	0/0:9,0:9:27.09:0,27,475	1/1:0,17:17:42.14:599,42,0	1/1:0,16:16:39.13:556,39,0	0/0:25,0:25:68.22:0,68,385	0/0:23,0:23:65.01:0,65,383	0/0:15,0:15:37.61:0,38,210	1/1:0,10:10:27.01:359,27,0	1/1:1,17:18:35.88:513,36,0	1/1:0,11:11:24.08:342,24,0	1/1:0,17:17:30.10:428,30,0	0/0:21,0:21:63.21:0,63,1118	0/0:23,0:23:54.86:0,55,298	0/0:19,0:19:57.06:0,57,1017
chr10	102782653	.	G	GTGTGTGTGTA	3931.29	PASS	AB=0.998;AC=19;AF=0.339;AN=56;BaseQRankSum=2.450;DP=714;FS=3.074;HRun=0;HaplotypeScore=218.1379;InbreedingCoeff=0.0775;MQ=54.81;MQ0=23;MQRankSum=-4.809;QD=10.48;ReadPosRankSum=2.747;VQSLOD=2.5577;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:46,0:46:99:255,0,236	0/1:7,0:7:10.17:55,0,10	0/0:35,0:21:8.97:0,9,211	0/0:46,0:21:31.98:0,32,300	0/0:15,0:14:14.45:0,14,114	0/1:24,0:24:99:153,0,176	0/0:32,0:32:6.50:0,7,208	1/1:37,0:35:52.56:851,53,0	0/1:20,0:20:33.16:33,0,196	0/0:21,0:20:50.33:0,50,579	0/0:14,0:14:23.85:0,24,245	0/0:33,0:33:81.07:0,81,1588	0/1:18,0:17:30.43:30,0,74	0/0:31,0:31:32.10:0,32,248	0/1:25,0:25:47.79:48,0,241	0/0:18,0:18:14.28:0,14,788	0/1:25,0:25:99:246,0,108	0/1:22,0:22:99:180,0,113	1/1:32,0:29:17.14:560,17,0	1/1:19,0:17:17.97:148,18,0	0/1:46,0:40:12.95:486,0,13	0/1:20,0:20:35.43:74,0,35	0/0:15,0:15:6.49:0,6,64	0/0:38,0:37:1.36:0,1,295	0/1:16,0:16:16.34:16,0,140	0/0:31,0:30:83.93:0,84,928	1/1:2,11:17:18.01:795,18,0	0/0:10,0:8:22.76:0,23,267
chr10	102782958	.	GAGCC	G	2167.33	PASS	AB=0.522;AC=20;AF=0.370;AN=54;BaseQRankSum=2.740;DP=487;FS=13.745;HRun=0;HaplotypeScore=78.5759;InbreedingCoeff=0.8038;MQ=74.17;MQ0=10;MQRankSum=-3.710;QD=14.55;ReadPosRankSum=4.200;VQSLOD=1.9737;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,34:35:2.52:0,3,17	1/1:0,9:9:12.04:198,12,0	0/0:30,0:19:57.15:0,57,989	0/0:43,0:19:48.49:0,48,820	0/0:21,0:21:51.65:0,52,1195	1/1:8,5:13:17.84:364,18,0	1/1:0,20:20:9.03:157,9,0	0/0:27,0:27:75.20:0,75,1751	0/1:1,13:14:0:0,0,0	0/0:15,0:15:41.93:0,42,1013	0/0:8,0:8:21.50:0,22,405	0/0:12,0:12:33.10:0,33,740	1/1:1,6:7:6.02:88,6,0	1/1:0,6:6:3.01:52,3,0	1/1:0,11:11:3.01:52,3,0	0/0:8,0:8:24.08:0,24,554	1/1:1,30:30:14.46:228,14,0	1/1:10,2:12:30.06:545,30,0	0/0:23,0:23:66.34:0,66,1438	0/0:13,0:13:36.12:0,36,818	0/0:17,0:17:42.13:0,42,933	0/0:0,10:10:0.47:0,0,1	0/1:1,9:9:0:1,0,0	1/1:15,1:16:31.89:666,32,0	./.	0/0:28,0:28:80.78:0,81,1828	0/0:21,0:20:58.12:0,58,1273	0/0:12,0:11:33.11:0,33,768
chr10	102784620	.	CCTCTCTGTCT	C	142.97	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=3.633;DP=824;FS=7.846;HRun=0;HaplotypeScore=212.3601;InbreedingCoeff=0.9529;MQ=68.72;MQ0=7;MQRankSum=-2.214;QD=6.50;ReadPosRankSum=1.262;VQSLOD=1.8836;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:84.26:0,84,2584	0/0:11,0:11:21.07:0,21,658	0/0:60,0:35:22.50:0,22,235	0/0:78,0:42:39.32:0,39,412	0/0:22,0:22:51.17:0,51,1505	0/0:15,0:14:21.07:0,21,814	0/0:26,0:26:33.11:0,33,989	0/0:29,0:29:36.11:0,36,562	0/0:35,0:35:72.23:0,72,2357	0/0:44,0:44:99:0,99,2828	0/0:18,0:18:39.13:0,39,1309	0/0:42,0:42:99:0,103,3649	0/0:23,0:23:33.11:0,33,1058	0/0:35,0:35:63.20:0,63,1865	0/0:23,0:22:45.14:0,45,1582	0/0:32,0:32:78.27:0,78,2315	1/1:8,13:20:12.04:229,12,0	0/0:29,0:29:51.65:0,52,1630	0/0:18,0:18:24.08:0,24,789	0/0:18,0:18:48.16:0,48,1800	0/0:37,0:37:57.64:0,58,1481	0/0:20,0:20:39.12:0,39,1071	0/0:25,0:25:40.38:0,40,1426	0/0:28,0:28:48.16:0,48,1723	0/0:15,0:15:24.08:0,24,686	0/0:37,0:37:75.26:0,75,2616	0/0:27,0:28:54.19:0,54,1989	./.
chr10	102784679	.	G	GTC	6396.38	PASS	AB=0.723;AC=24;AF=0.429;AN=56;BaseQRankSum=-5.878;DP=853;FS=6.611;HRun=0;HaplotypeScore=103.7528;InbreedingCoeff=0.2922;MQ=54.60;MQ0=25;MQRankSum=0.664;QD=12.92;ReadPosRankSum=2.150;VQSLOD=4.0859;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,42:60:16.29:904,16,0	1/1:2,13:15:17.97:254,18,0	0/1:13,0:1:0:0,0,0	0/0:17,0:3:5.80:0,6,47	0/0:27,0:28:68.75:0,69,683	0/1:8,12:19:50.39:218,0,50	0/1:10,24:32:73.74:294,0,74	0/0:47,0:42:14.31:0,14,320	0/1:14,26:41:49.20:673,0,49	0/0:52,0:53:65.11:0,65,1153	0/0:17,0:17:27.94:0,28,301	0/0:44,0:46:86.53:0,87,944	1/1:6,24:30:45.10:713,45,0	0/1:10,29:40:6.10:700,0,6	1/1:7,25:32:0.85:466,1,0	0/0:36,0:35:52.25:0,52,988	1/1:30,0:28:28.52:406,29,0	0/1:10,14:24:59.22:349,0,59	0/0:18,0:18:13.76:0,14,141	0/1:20,0:19:0.57:1,0,62	0/0:37,0:32:8.53:0,9,73	0/1:10,15:24:99:165,0,115	0/1:8,16:25:28.88:218,0,29	1/1:12,26:40:6.15:648,6,0	1/1:6,14:19:24.08:382,24,0	0/0:53,0:50:99:0,108,1202	0/1:22,0:22:7.03:7,0,116	0/0:5,0:5:15.05:0,15,179
chr10	102784698	.	T	TCACACA	2181.15	PASS	AB=0.815;AC=11;AF=0.196;AN=56;BaseQRankSum=4.365;DP=887;FS=1.185;HRun=0;HaplotypeScore=188.2820;InbreedingCoeff=0.7045;MQ=55.96;MQ0=19;MQRankSum=-4.472;QD=10.85;ReadPosRankSum=-3.202;VQSLOD=2.2371;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:54:78.04:0,78,864	0/0:16,0:16:23.82:0,24,265	0/0:20,0:5:5.66:0,6,119	0/1:26,0:8:8.13:8,0,68	0/0:30,0:29:60.17:0,60,1109	0/0:22,0:20:33.03:0,33,469	0/0:34,0:33:27.79:0,28,597	1/1:43,0:40:48.62:966,49,0	0/0:47,0:47:98.81:0,99,1283	0/0:56,0:55:99:0,117,2140	0/0:14,0:14:33.11:0,33,667	0/0:44,0:44:99:0,105,1996	0/0:39,0:39:83.51:0,84,1107	0/0:47,0:47:83.60:0,84,1018	0/0:31,0:32:45.63:0,46,553	0/0:45,0:44:99:0,108,2108	0/1:23,0:29:82.41:191,0,82	0/0:25,0:25:48.08:0,48,710	1/1:10,7:18:33.05:661,33,0	1/1:18,1:19:9.73:201,10,0	0/1:18,13:37:0.17:0,0,0	0/0:28,0:27:45.10:0,45,757	0/0:22,0:23:30.03:0,30,351	0/0:36,0:37:59.19:0,59,738	0/0:17,0:17:33.02:0,33,392	0/0:48,0:46:99:0,108,1932	1/1:14,9:23:12.19:314,12,0	0/0:7,0:7:21.04:0,21,390
chr10	102785409	.	T	TTA	852.44	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=-2.528;DP=415;FS=0.886;HRun=0;HaplotypeScore=68.4622;InbreedingCoeff=0.7711;MQ=71.31;MQ0=0;MQRankSum=-1.562;QD=30.44;ReadPosRankSum=-1.086;VQSLOD=4.5726;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:90.29:0,90,1144	0/0:10,0:10:30.09:0,30,370	0/0:7,0:7:11.99:0,12,123	0/0:7,0:7:5:0,5,26	0/0:16,0:16:27.07:0,27,330	0/0:21,0:20:51.16:0,51,649	0/0:11,0:11:18.06:0,18,229	0/0:26,0:26:57.17:0,57,704	0/0:9,0:9:21.05:0,21,253	0/0:20,0:20:48.15:0,48,610	0/0:11,0:11:18.06:0,18,229	0/0:15,0:15:42.11:0,42,497	0/0:7,0:7:15.05:0,15,191	0/0:10,0:10:15.05:0,15,191	0/0:20,0:20:39.12:0,39,484	0/0:6,0:6:12.04:0,12,153	1/1:10,18:28:60.15:947,60,0	0/0:23,0:23:54.13:0,54,669	0/0:17,0:17:48.15:0,48,611	0/0:19,0:19:38.86:0,39,469	0/0:6,0:6:15.04:0,15,178	./.	0/0:8,0:8:21.07:0,21,266	0/0:4,0:4:12.04:0,12,153	0/0:17,0:17:36.11:0,36,458	0/0:27,0:27:69.21:0,69,867	0/0:11,0:11:29.97:0,30,357	0/0:17,0:17:48.15:0,48,611
chr10	102785423	.	GA	G	6330.66	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=10.477;DP=402;FS=0.886;HRun=9;HaplotypeScore=43.2527;InbreedingCoeff=0.9393;MQ=73.40;MQ0=0;MQRankSum=0.295;QD=23.10;ReadPosRankSum=2.201;VQSLOD=5.4456;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:67.44:871,67,0	1/1:2,7:9:21.01:192,21,0	0/0:8,0:8:12.01:0,12,126	0/0:9,0:8:2.97:0,3,36	0/0:9,0:9:21.06:0,21,242	1/1:1,22:22:60.03:549,60,0	1/1:0,10:10:24.01:220,24,0	1/1:4,27:31:81.03:736,81,0	1/1:1,9:10:27.01:247,27,0	0/0:21,0:21:51.14:0,51,574	0/0:7,0:7:12.04:0,12,139	0/0:17,0:17:48.14:0,48,554	1/1:0,5:5:15.01:137,15,0	1/1:2,6:8:15:137,15,0	1/1:4,13:17:36.02:330,36,0	0/0:8,0:8:24.04:0,24,258	1/1:4,18:22:48.01:439,48,0	1/1:3,19:22:54.03:494,54,0	1/1:1,19:20:54.03:494,54,0	1/1:2,13:15:39.01:352,39,0	1/1:0,7:7:18.01:165,18,0	1/1:0,3:3:9:82,9,0	1/1:1,7:8:21.01:192,21,0	1/1:0,4:4:12.01:110,12,0	1/1:2,12:14:38.06:335,38,0	0/0:32,0:32:93.24:0,93,1051	1/1:1,10:11:27.01:247,27,0	0/0:17,0:17:51.15:0,51,589
chr10	102786948	.	AGTGTGTGTGTGTGT	A	4271.49	PASS	AB=0.848;AC=24;AF=0.444;AN=54;BaseQRankSum=6.459;DP=797;FS=5.931;HRun=0;HaplotypeScore=285.9353;InbreedingCoeff=0.4985;MQ=52.85;MQ0=14;MQRankSum=-6.996;QD=10.87;ReadPosRankSum=2.287;VQSLOD=3.0308;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,27:40:3.01:0,3,54	./.	0/0:33,0:19:6.02:0,6,138	0/0:30,0:13:13.28:0,13,304	0/0:17,0:20:36.09:0,36,1512	1/1:3,13:16:6.02:231,6,0	1/1:24,3:27:2.06:352,2,0	0/0:30,0:21:1.21:0,1,92	1/1:11,24:43:33.03:1302,33,0	0/0:50,0:54:99:0,138,5011	0/0:23,0:24:35.78:0,36,1347	0/0:43,0:48:99:0,103,4925	1/1:10,31:41:21.01:689,21,0	1/1:11,27:39:4.50:92,5,0	1/1:12,34:45:12.70:395,13,0	0/0:24,0:29:53.55:0,54,2367	0/1:19,4:23:7.92:266,0,8	1/1:12,2:14:20.81:600,21,0	0/0:25,0:18:0.55:0,1,67	1/1:13,0:12:7.83:65,8,0	0/1:44,0:43:28.53:29,0,37	0/1:3,18:21:0.20:0,0,0	0/0:7,10:17:3.07:0,3,10	1/1:11,19:30:3.01:72,3,0	1/1:8,15:24:3.48:120,3,0	0/0:36,0:39:87.28:0,87,3347	0/1:10,0:9:17.94:58,0,18	0/0:8,0:8:15.03:0,15,533
chr10	102786975	.	G	GAGCATGCA	1996.62	PASS	AB=0.983;AC=13;AF=0.232;AN=56;BaseQRankSum=7.851;DP=778;FS=23.776;HRun=0;HaplotypeScore=229.4960;InbreedingCoeff=-0.1804;MQ=46.53;MQ0=31;MQRankSum=-6.430;QD=5.58;ReadPosRankSum=2.838;VQSLOD=1.0146;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:21:0,21,377	0/0:9,0:9:9.03:0,9,196	0/0:33,0:5:14.98:0,15,184	0/0:43,0:9:21.04:0,21,364	0/0:20,0:20:41.91:0,42,973	0/1:16,0:16:99:183,0,208	0/1:36,1:36:99:140,0,902	0/0:16,0:8:17.11:0,17,134	0/1:55,0:54:99:616,0,833	0/0:49,0:49:99:0,144,3638	0/0:18,0:18:41.86:0,42,1046	0/0:41,0:41:99:0,110,3191	0/1:43,0:42:99:242,0,505	0/1:34,0:34:35.34:35,0,235	0/1:44,0:43:99:218,0,486	0/0:24,0:24:66:0,66,1656	0/1:28,1:29:99:201,0,768	0/1:18,3:21:99:372,0,375	0/0:10,0:8:10.29:0,10,137	1/1:10,0:9:0.95:18,1,0	0/1:41,0:40:14.93:15,0,43	0/0:28,0:28:29.56:0,30,700	0/0:13,0:13:5.57:0,6,164	0/0:32,0:32:21.07:0,21,614	0/1:22,0:22:66.26:66,0,293	0/0:39,0:37:99:0,105,2744	0/1:6,0:5:10.91:40,0,11	0/0:7,0:7:17.95:0,18,441
chr10	102786979	.	G	GCA	290.09	PASS	AB=0.971;AC=12;AF=0.214;AN=56;BaseQRankSum=7.849;DP=761;FS=14.596;HRun=0;HaplotypeScore=181.1202;InbreedingCoeff=0.1222;MQ=47.00;MQ0=28;MQRankSum=-4.904;QD=1.10;ReadPosRankSum=0.569;VQSLOD=2.0423;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:37:0.88:1,0,249	0/0:9,0:9:12.04:0,12,183	0/0:28,0:3:9.03:0,9,116	0/0:38,0:9:20.83:0,21,317	0/0:18,0:18:39.10:0,39,591	0/1:18,0:18:22.66:23,0,144	0/0:36,0:35:17.97:0,18,706	0/0:12,0:5:9.03:0,9,125	0/1:55,0:53:66.19:66,0,642	0/0:46,0:46:99:0,129,1862	0/0:17,0:17:38.75:0,39,546	0/0:43,0:42:99:0,116,1695	0/1:42,0:41:7.94:8,0,375	0/0:37,0:37:23.26:0,23,339	0/0:47,0:46:26.35:0,26,387	0/0:24,0:24:63.14:0,63,896	0/1:27,0:27:36.66:37,0,501	0/1:21,0:21:5.80:6,0,416	0/1:8,1:7:43.50:43,0,159	1/1:7,2:9:8.86:113,9,0	0/1:34,6:39:17.29:36,0,17	0/0:28,0:28:30.32:0,30,457	0/0:14,0:14:9.03:0,9,139	0/0:34,0:34:27.09:0,27,397	0/0:25,0:25:20.69:0,21,249	0/0:36,0:35:99:0,102,1385	1/1:4,1:4:6.02:105,6,0	0/0:6,0:6:18.05:0,18,259
chr10	102786985	.	GCGTGAGCA	G	206.18	PASS	AB=0.947;AC=7;AF=0.125;AN=56;BaseQRankSum=6.884;DP=749;FS=17.328;HRun=0;HaplotypeScore=225.0172;InbreedingCoeff=0.1041;MQ=48.31;MQ0=24;MQRankSum=-5.505;QD=1.39;ReadPosRankSum=-1.180;VQSLOD=0.6094;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:42:18.38:18,0,817	0/0:9,0:9:12.04:0,12,393	0/1:26,0:6:7.97:8,0,323	0/0:33,0:10:21.73:0,22,488	0/0:14,0:14:33.07:0,33,1258	0/0:20,0:20:11.57:0,12,573	0/0:33,1:35:52.63:0,53,1653	0/0:14,0:5:7.89:0,8,54	0/1:59,0:58:6.21:6,0,1734	0/0:33,0:33:57.14:0,57,3062	0/0:13,0:13:30.10:0,30,1025	0/0:36,0:35:75.62:0,76,3598	0/0:45,0:44:38.35:0,38,993	0/0:40,0:40:33.46:0,33,1033	0/0:51,0:50:48.51:0,49,1369	0/0:23,0:23:54.74:0,55,1976	0/0:27,0:27:26.37:0,26,1439	0/0:21,0:21:28.93:0,29,968	0/1:8,0:7:88.46:88,0,142	0/1:6,3:9:13.19:28,0,13	0/0:37,1:36:2.38:0,2,19	0/0:32,0:32:41.70:0,42,1348	0/0:16,0:16:15.01:0,15,473	0/0:35,0:35:33.11:0,33,999	0/0:25,0:25:26.92:0,27,738	0/0:33,0:32:57.48:0,57,2939	1/1:1,2:2:6.02:179,6,0	0/0:7,0:7:1.90:0,2,630
chr10	102787032	.	A	AGT	152.84	PASS	AC=4;AF=0.080;AN=50;BaseQRankSum=2.209;DP=851;FS=7.000;HRun=0;HaplotypeScore=182.0165;InbreedingCoeff=0.8405;MQ=64.11;MQ0=4;MQRankSum=-1.836;QD=6.11;ReadPosRankSum=-1.933;VQSLOD=2.3261;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:96.29:0,96,1247	0/0:5,0:5:9.03:0,9,117	0/0:48,0:35:56.94:0,57,911	0/0:55,0:45:89.73:0,90,1059	0/0:15,0:15:42.07:0,42,526	0/0:28,0:27:60.15:0,60,760	0/0:42,0:42:99:0,99,1236	1/1:6,4:4:12.04:204,12,0	0/0:52,0:50:99:0,117,1504	0/0:46,0:46:99:0,117,1521	0/0:16,0:16:39.13:0,39,506	0/0:35,0:34:95.79:0,96,1148	0/0:52,0:52:94.21:0,94,1223	0/0:51,0:51:87.27:0,87,1117	0/0:43,0:42:87.11:0,87,1131	0/0:30,0:30:84.23:0,84,1047	0/0:43,0:43:99:0,109,1386	0/0:22,0:22:49.81:0,50,694	./.	./.	1/1:11,4:14:2.28:50,2,0	0/0:40,0:40:69.22:0,69,895	0/0:17,0:17:27.06:0,27,339	0/0:48,0:48:90.18:0,90,1120	0/0:34,0:34:60.18:0,60,764	0/0:37,0:37:99:0,108,1353	./.	0/0:16,0:16:42.13:0,42,540
chr10	102787067	.	G	GCA	90.37	PASS	AC=4;AF=0.080;AN=50;BaseQRankSum=4.361;DP=888;FS=1.501;HRun=0;HaplotypeScore=200.7234;InbreedingCoeff=0.8612;MQ=62.24;MQ0=5;MQRankSum=-1.676;QD=12.91;ReadPosRankSum=-1.325;VQSLOD=3.1191;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,153,2477	0/0:7,0:7:18.05:0,18,294	0/0:58,0:37:88.82:0,89,1529	0/0:53,0:44:99:0,117,1699	0/0:18,0:18:54.17:0,54,856	0/0:32,0:31:90.31:0,90,1465	0/0:45,0:45:99:0,126,2021	./.	0/0:56,0:55:99:0,138,2170	0/0:53,0:53:99:0,160,2570	0/0:14,0:14:39.13:0,39,631	0/0:46,0:45:99:0,123,1947	0/0:45,0:45:99:0,123,1999	0/0:51,0:51:99:0,126,2018	0/0:47,0:46:99:0,123,2006	0/0:34,0:34:99:0,102,1611	0/0:47,0:47:99:0,132,2147	0/0:25,0:25:61.83:0,62,1042	1/1:1,3:3:9.03:143,9,0	./.	./.	0/0:30,0:30:78.25:0,78,1245	0/0:16,0:16:48.16:0,48,782	0/0:48,0:48:99:0,123,1970	0/0:32,0:32:93.32:0,93,1509	0/0:41,0:41:99:0,120,1957	1/1:0,3:3:3:47,3,0	0/0:21,0:21:63.22:0,63,1027
chr10	102787072	.	T	TG	91.69	PASS	AC=4;AF=0.080;AN=50;BaseQRankSum=3.317;DP=895;FS=0.000;HRun=1;HaplotypeScore=192.0280;InbreedingCoeff=0.8613;MQ=60.95;MQ0=6;MQRankSum=-3.297;QD=11.46;ReadPosRankSum=-0.283;VQSLOD=1.7110;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,141,1921	0/0:8,0:8:18.06:0,18,250	0/0:51,0:31:80.44:0,80,1040	0/0:51,0:39:99:0,102,1322	0/0:19,0:19:57.14:0,57,758	0/0:34,0:33:96.19:0,96,1243	0/0:43,0:43:99:0,120,1595	./.	0/0:53,1:53:99:0,120,1629	0/0:54,0:54:99:0,153,2103	0/0:13,0:13:39.13:0,39,543	0/0:52,0:51:99:0,141,1928	0/0:44,0:44:99:0,114,1596	0/0:52,0:52:99:0,126,1735	0/0:47,0:46:99:0,120,1634	0/0:34,0:34:93.31:0,93,1297	0/0:52,0:52:99:0,141,1922	0/0:26,0:26:68.17:0,68,882	1/1:1,4:4:9.03:143,9,0	./.	./.	0/0:30,0:30:69.10:0,69,899	0/0:16,0:16:48.04:0,48,603	0/0:48,0:48:99:0,114,1595	0/0:32,0:32:93.22:0,93,1253	0/0:41,0:41:99:0,117,1618	1/1:0,3:3:3.01:48,3,0	0/0:23,0:23:69.23:0,69,953
chr10	102787081	.	TGC	T	69.50	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.304;DP=880;FS=7.673;HRun=0;HaplotypeScore=190.6980;InbreedingCoeff=0.8322;MQ=59.41;MQ0=10;MQRankSum=-3.638;QD=2.24;ReadPosRankSum=-2.994;VQSLOD=1.4112;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,126,1597	0/0:7,0:7:15.04:0,15,167	0/0:48,0:23:34.10:0,34,899	0/0:49,0:32:50.54:0,51,1227	0/0:21,0:21:57.16:0,57,1020	0/0:32,0:31:86.59:0,87,1059	0/0:39,0:39:97.11:0,97,1180	1/1:2,0:2:2.97:20,3,0	0/0:54,0:53:99:0,126,1408	0/0:48,0:48:99:0,138,2405	0/0:13,0:13:39.11:0,39,681	0/0:51,0:51:99:0,150,2739	0/0:43,0:42:99:0,115,1254	0/0:52,0:52:99:0,107,1195	0/0:46,0:43:99:0,104,1165	0/0:37,0:37:99:0,111,1978	0/0:50,0:50:99:0,141,2495	0/0:28,0:27:62.93:0,63,707	1/1:1,3:4:11.90:84,12,0	1/1:2,0:2:0.47:1,0,0	1/1:16,4:20:9.83:75,10,0	0/0:28,0:28:69:0,69,803	0/0:18,0:18:42.05:0,42,490	0/0:48,0:47:99:0,110,1363	0/0:29,0:29:78.23:0,78,929	0/0:36,0:36:99:0,104,1813	1/1:0,3:3:2.95:22,3,0	0/0:19,0:19:57.11:0,57,984
chr10	102787088	.	ATG	A	12130.57	PASS	AB=0.957;AC=30;AF=0.536;AN=56;BaseQRankSum=11.262;DP=905;FS=15.664;HRun=0;HaplotypeScore=153.6270;InbreedingCoeff=0.7768;MQ=58.11;MQ0=12;MQRankSum=1.172;QD=23.55;ReadPosRankSum=5.476;VQSLOD=4.8022;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,35:52:99:1247,99,0	1/1:0,7:7:15.05:189,15,0	0/0:57,1:24:43.79:0,44,612	0/0:51,0:30:60.19:0,60,924	0/0:20,0:20:54.18:0,54,897	1/1:10,22:31:72.23:907,72,0	1/1:9,28:37:87.13:1066,87,0	0/0:4,0:4:2.97:0,3,20	1/1:9,38:47:92.97:1159,93,0	0/0:49,1:50:97.61:0,98,2147	0/0:13,0:13:30.10:0,30,494	0/0:57,0:57:99:0,157,2576	1/1:9,32:40:96.30:1198,96,0	1/1:5,45:51:99:1297,105,0	1/1:9,34:40:87.28:1094,87,0	0/0:37,1:38:58.41:0,58,1451	0/0:52,2:54:59.60:0,60,1993	1/1:7,21:27:22.75:609,23,0	0/0:8,0:8:5.91:0,6,48	0/0:3,0:3:2.86:0,3,25	0/1:24,0:24:8.55:9,0,18	1/1:1,27:28:54.17:681,54,0	1/1:10,11:21:38.70:477,39,0	1/1:7,41:48:99:1226,99,0	1/1:2,28:30:75.24:946,75,0	0/0:34,0:34:84.28:0,84,1362	1/1:3,0:3:0.86:2,1,0	0/1:19,2:21:24.51:25,0,665
chr10	102787179	.	A	ATG	19008.35	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-18.221;DP=1126;FS=2.527;HRun=0;HaplotypeScore=197.1980;InbreedingCoeff=0.9352;MQ=56.34;MQ0=6;MQRankSum=4.962;QD=30.61;ReadPosRankSum=3.342;VQSLOD=6.1308;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,48:54:99:1837,108,0	1/1:0,12:12:33.11:561,33,0	0/0:38,0:26:56.91:0,57,652	0/1:38,0:29:9.60:10,0,522	0/0:23,0:23:69.21:0,69,883	1/1:2,26:29:56.98:931,57,0	1/1:9,45:55:75.07:1275,75,0	0/0:29,0:29:75.15:0,75,923	1/1:10,57:66:99:1783,105,0	0/0:53,0:53:99:0,132,1664	0/0:18,0:18:24.12:0,24,561	0/0:51,0:50:99:0,105,1337	1/1:9,46:54:99:1782,105,0	1/1:9,32:42:84.18:1401,84,0	1/1:4,48:52:96.33:1633,96,0	0/0:42,0:42:99:0,108,1389	1/1:6,41:48:99:1781,105,0	1/1:14,20:34:70.27:1265,70,0	0/0:28,0:26:57.18:0,57,741	0/0:13,0:13:36.12:0,36,468	0/0:139,0:137:99:0,186,2373	1/1:12,20:31:57.18:937,57,0	1/1:4,14:18:36.12:606,36,0	1/1:14,40:53:99:2047,126,0	1/1:7,22:29:69.24:1158,69,0	0/0:38,0:38:99:0,105,1343	0/0:17,0:17:45.62:0,46,583	0/0:16,0:16:42.11:0,42,525
chr10	102787212	.	AGT	A	2926.53	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.361;DP=1044;FS=0.000;HRun=0;HaplotypeScore=222.1082;InbreedingCoeff=0.9881;MQ=56.86;MQ0=4;MQRankSum=-3.376;QD=15.99;ReadPosRankSum=-0.260;VQSLOD=3.2530;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,1:44:93.21:0,93,1522	0/0:9,0:9:15.05:0,15,251	0/0:45,0:20:33.26:0,33,529	0/0:43,0:20:28.29:0,28,386	0/0:26,0:26:72.19:0,72,1138	0/0:33,0:33:67.08:0,67,1055	0/0:43,1:42:72.22:0,72,1172	1/1:6,25:30:63.10:739,63,0	0/0:59,1:59:89.11:0,89,1962	0/0:57,1:58:99:0,118,2486	0/0:24,0:24:63.20:0,63,1029	0/0:39,0:39:55.45:0,55,1360	0/0:44,1:44:46.15:0,46,1286	0/0:49,0:49:99:0,114,1890	0/0:53,0:53:99:0,123,2024	0/0:40,0:40:99:0,114,1894	0/0:50,0:50:89.98:0,90,1626	0/0:30,0:30:64.32:0,64,1184	1/1:4,14:15:41.69:455,42,0	1/1:3,7:10:12.02:137,12,0	1/1:25,85:107:99:1428,116,0	0/0:26,0:25:54.17:0,54,868	0/0:19,0:19:42.13:0,42,670	0/0:56,0:56:99:0,126,2033	0/0:20,0:20:54.17:0,54,872	0/0:34,0:34:96.30:0,96,1527	1/1:6,8:14:27.08:339,27,0	0/0:10,0:10:24.08:0,24,401
chr10	102787275	.	A	ATGTGTG	2195.32	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=2.944;DP=977;FS=3.924;HRun=0;HaplotypeScore=258.2543;InbreedingCoeff=0.6675;MQ=57.16;MQ0=16;MQRankSum=-8.218;QD=9.15;ReadPosRankSum=-4.429;VQSLOD=1.8852;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:43.37:0,43,1295	0/0:7,0:7:18.06:0,18,389	0/1:71,0:18:14.99:15,0,249	0/1:80,0:22:14.34:14,0,242	0/0:17,0:17:30.10:0,30,626	0/0:28,0:28:63.17:0,63,1276	0/0:30,0:31:66.12:0,66,1304	1/1:40,0:39:60.02:1273,60,0	0/0:47,0:47:88.72:0,89,1654	0/0:40,0:40:69.24:0,69,1473	0/0:28,0:28:60.14:0,60,1153	0/0:49,0:49:99:0,120,2379	0/0:39,0:39:89.75:0,90,1773	0/0:42,0:43:99:0,102,1877	0/0:35,0:36:75.23:0,75,1486	0/0:39,0:39:93.30:0,93,1914	0/0:41,0:41:75.86:0,76,1438	0/0:34,0:34:73.62:0,74,1248	1/1:17,3:19:24:556,24,0	1/1:4,5:12:1.83:91,2,0	0/0:33,9:43:4.65:0,5,39	0/0:35,0:36:75.22:0,75,1534	0/0:17,0:17:36.11:0,36,704	0/0:55,0:55:99:0,121,2516	0/0:27,0:27:57.10:0,57,1021	0/0:35,0:34:90.25:0,90,1832	1/1:7,5:15:12.04:402,12,0	0/0:8,0:7:18.06:0,18,388
chr10	102787358	.	ATGTG	A	725.62	PASS	AB=0.943;AC=3;AF=0.054;AN=56;BaseQRankSum=-0.449;DP=871;FS=0.000;HRun=0;HaplotypeScore=214.8002;InbreedingCoeff=0.4820;MQ=56.56;MQ0=17;MQRankSum=0.630;QD=10.08;ReadPosRankSum=0.979;VQSLOD=2.5472;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:44:83:0,83,1194	0/0:2,0:10:26.10:0,26,375	0/0:57,0:11:2.94:0,3,18	0/0:67,0:24:22.77:0,23,249	0/0:29,0:31:74.61:0,75,1495	0/0:12,0:28:0.66:0,1,278	0/0:18,0:25:43.37:0,43,655	0/0:32,0:29:32.98:0,33,569	0/0:23,0:34:64.74:0,65,933	0/0:41,0:44:82.56:0,83,1803	0/0:14,0:14:18.06:0,18,431	0/1:31,2:33:26.87:27,0,1414	0/0:16,0:28:60.05:0,60,909	0/0:16,0:36:77.74:0,78,1267	0/0:15,0:30:76.23:0,76,1139	0/0:20,0:22:41.88:0,42,944	1/1:12,24:39:42.56:804,43,0	0/0:19,0:30:54.46:0,54,771	0/0:19,0:18:32.75:0,33,694	0/0:18,0:18:31.66:0,32,711	0/0:40,0:42:39.13:0,39,953	0/0:19,0:34:35.25:0,35,759	0/0:8,0:22:29.03:0,29,472	0/0:36,0:56:99:0,113,1683	0/0:14,0:21:27.06:0,27,381	0/0:29,0:30:65.96:0,66,1510	0/0:12,0:12:24.08:0,24,538	0/0:8,0:8:12.51:0,13,268
chr10	102787365	.	T	TGC	581.04	PASS	AB=0.994;AC=11;AF=0.196;AN=56;BaseQRankSum=15.351;DP=867;FS=1.006;HRun=0;HaplotypeScore=178.0354;InbreedingCoeff=-0.0503;MQ=53.63;MQ0=19;MQRankSum=0.725;QD=1.94;ReadPosRankSum=10.530;VQSLOD=1.2401;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:7.30:0,7,225	1/1:9,0:9:11.27:47,11,0	0/0:62,0:7:20.92:0,21,164	0/0:62,0:20:26.29:0,26,296	0/0:31,0:31:81.03:0,81,1042	0/1:27,0:27:5.34:5,0,79	0/0:25,0:25:8.97:0,9,292	0/0:32,0:29:86.90:0,87,878	0/1:35,0:35:64.84:65,0,236	0/0:49,0:48:99:0,138,1653	0/0:11,0:11:33.04:0,33,398	0/0:33,0:33:89.94:0,90,1140	0/1:25,0:25:54.79:55,0,78	0/1:36,0:37:73.28:73,0,168	0/1:30,0:30:99:373,0,102	0/0:23,0:23:60.06:0,60,764	0/0:38,0:38:74.36:0,74,526	0/0:30,0:30:1.39:0,1,318	0/0:19,0:16:45.01:0,45,552	0/0:17,0:17:33.08:0,33,461	0/0:36,5:40:44.93:0,45,641	0/1:35,0:35:31.65:32,0,302	0/1:22,0:21:16.11:16,0,57	0/1:55,0:54:44.88:45,0,360	0/1:23,0:23:18.40:18,0,118	0/0:32,0:32:87.01:0,87,1137	0/0:14,0:14:30.07:0,30,411	0/0:6,0:6:16.28:0,16,207
chr10	102787570	.	C	CT	388.87	PASS	AB=0.735;AC=8;AF=0.143;AN=56;BaseQRankSum=8.466;DP=520;FS=12.193;HRun=2;HaplotypeScore=74.4043;InbreedingCoeff=0.6446;MQ=76.48;MQ0=0;MQRankSum=-5.630;QD=8.10;ReadPosRankSum=-0.229;VQSLOD=-0.3355;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,108,1301	0/0:5,0:5:15.05:0,15,186	0/0:10,0:10:20.47:0,20,251	0/0:17,0:17:42.11:0,42,490	0/0:11,0:11:30.09:0,30,371	0/0:16,0:16:42.10:0,42,493	0/0:36,0:36:99:0,105,1225	0/1:16,4:20:90.91:140,0,91	0/0:30,0:30:78.25:0,78,966	0/0:22,0:22:63.18:0,63,756	0/0:15,0:15:33.08:0,33,386	0/0:34,0:34:99:0,99,1170	0/0:18,0:18:54.13:0,54,638	0/0:30,0:30:90.27:0,90,1101	0/0:12,0:12:33.09:0,33,396	0/0:17,0:16:51.14:0,51,618	0/0:27,0:27:72.23:0,72,892	0/0:34,0:34:93.23:0,93,1120	1/1:1,4:5:11.64:107,12,0	1/1:0,2:3:8.99:75,9,0	0/1:6,8:14:4:112,0,4	0/0:20,0:20:60.17:0,60,730	0/0:7,0:7:18.04:0,18,210	0/0:34,0:33:96.28:0,96,1164	0/0:12,0:12:30.08:0,30,358	0/0:15,0:15:45.13:0,45,545	1/1:1,5:6:1.38:90,1,0	0/0:9,0:9:27.08:0,27,334
chr10	102787575	.	C	CTAATGTTTCAA	6408.21	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.695;DP=538;FS=25.584;HRun=0;HaplotypeScore=181.9110;InbreedingCoeff=0.9583;MQ=72.21;MQ0=0;MQRankSum=-8.980;QD=91.55;ReadPosRankSum=-1.187;VQSLOD=2.8534;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,3964	0/0:5,0:5:15.05:0,15,550	0/0:9,0:9:23.91:0,24,734	0/0:14,0:14:42.14:0,42,1359	0/0:10,0:10:30.10:0,30,1017	0/0:16,0:16:48.16:0,48,1514	0/0:35,0:35:99:0,105,3524	1/1:21,4:25:6.09:2506,6,0	0/0:31,0:31:84.29:0,84,2859	0/0:22,0:22:66.21:0,66,2182	0/0:14,0:14:42.14:0,42,1257	0/0:31,0:31:90.31:0,90,3306	0/0:20,0:20:60.17:0,60,1979	0/0:31,0:31:90.30:0,90,3151	0/0:11,0:11:33.11:0,33,1156	0/0:17,0:16:51.18:0,51,1860	0/0:27,0:27:81.28:0,81,2799	0/0:33,0:33:93.32:0,93,3270	1/1:6,4:10:19.74:745,20,0	1/1:2,2:5:12.04:550,12,0	1/1:12,8:20:33.11:1305,33,0	0/0:22,0:22:63.21:0,63,2202	0/0:5,0:5:15.05:0,15,443	0/0:36,0:34:99:0,99,3360	0/0:11,0:11:33.11:0,33,1116	0/0:17,0:17:48.16:0,48,1499	1/1:5,4:10:30.10:1303,30,0	0/0:9,0:9:27.09:0,27,1007
chr10	102787698	.	AGAAAAGCAAAGTT	A	2747.75	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.328;DP=564;FS=14.860;HRun=0;HaplotypeScore=208.9697;InbreedingCoeff=0.9693;MQ=86.43;MQ0=0;MQRankSum=-5.885;QD=72.31;ReadPosRankSum=-0.436;VQSLOD=1.6831;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.31:0,90,5872	0/0:5,0:5:12.04:0,12,796	0/0:21,0:21:60.16:0,60,3123	0/0:23,0:23:56.28:0,56,2911	0/0:31,0:31:90.28:0,90,5679	0/0:17,0:17:45.15:0,45,2799	0/0:33,0:32:87.29:0,87,5371	1/1:1,7:8:21.07:797,21,0	0/0:24,0:24:72.25:0,72,4628	0/0:30,0:30:87.29:0,87,5195	0/0:13,0:13:39.13:0,39,2430	0/0:39,0:39:99:0,117,7132	0/0:26,0:26:72.25:0,72,4454	0/0:26,0:26:78.27:0,78,4878	0/0:14,0:14:36.09:0,36,2029	0/0:23,0:23:69.24:0,69,4141	0/0:30,0:30:78.27:0,78,4608	0/0:23,0:23:66.18:0,66,3737	1/1:2,4:6:12.02:305,12,0	1/1:1,6:7:12.51:484,13,0	1/1:3,7:9:12.04:483,12,0	0/0:20,0:20:60.12:0,60,3540	0/0:17,0:17:48.16:0,48,2863	0/0:34,0:34:96.79:0,97,5602	0/0:15,0:14:45.15:0,45,2973	0/0:23,0:23:69.24:0,69,4143	1/1:0,7:7:21.07:847,21,0	0/0:8,0:8:24.08:0,24,1453
chr10	102787761	.	A	ATGTGTGTGTGTGTG	3710.90	PASS	AB=0.972;AC=22;AF=0.393;AN=56;BaseQRankSum=11.019;DP=660;FS=0.465;HRun=0;HaplotypeScore=269.5818;InbreedingCoeff=0.0370;MQ=62.21;MQ0=15;MQRankSum=-8.791;QD=9.82;ReadPosRankSum=-3.476;VQSLOD=1.8986;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:7.65:0,8,326	0/1:11,0:10:96.29:96,0,157	0/0:34,0:19:38.87:0,39,628	0/0:26,0:14:25.75:0,26,326	0/0:33,0:33:70.32:0,70,2234	0/1:27,0:26:87.73:88,0,173	0/1:30,0:29:99:168,0,207	1/1:28,0:25:51.87:646,52,0	0/1:23,0:22:99:112,0,265	0/0:36,0:35:84.51:0,85,2427	0/0:16,0:16:38.94:0,39,949	0/0:37,0:37:99:0,105,2713	0/1:13,2:27:99:388,0,206	0/1:27,0:27:99:191,0,221	0/1:22,0:22:99:297,0,110	0/0:22,0:22:54.03:0,54,1397	0/1:21,0:20:99:276,0,176	0/1:16,0:16:99:342,0,230	1/1:13,0:11:19.90:239,20,0	1/1:14,0:14:8.56:147,9,0	1/1:25,0:22:3.01:58,3,0	0/1:29,0:26:99:367,0,165	0/0:6,0:6:5.99:0,6,48	0/1:31,0:30:23.61:24,0,175	0/1:17,0:16:99:117,0,260	0/0:25,0:25:56.91:0,57,1748	1/1:17,0:16:16.59:155,17,0	0/0:13,0:13:33.07:0,33,793
chr10	102787764	.	C	CGTGTGTGTGTGTGTGT	5252.31	PASS	AB=1.000;AC=36;AF=0.667;AN=54;BaseQRankSum=1.520;DP=680;FS=2.784;HRun=0;HaplotypeScore=278.2809;InbreedingCoeff=0.6462;MQ=56.46;MQ0=18;MQRankSum=-4.873;QD=11.39;ReadPosRankSum=-3.548;VQSLOD=3.2036;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:32:60.83:78,0,61	1/1:10,0:9:3.01:120,3,0	1/1:30,0:15:2.74:12,3,0	./.	0/0:34,0:34:6.60:0,7,1840	1/1:25,0:24:9.02:181,9,0	0/1:28,0:27:0.61:339,0,1	1/1:29,0:26:15.05:371,15,0	1/1:23,0:22:12.50:315,12,0	0/0:32,0:35:58.31:0,58,1914	0/0:13,0:17:20.89:0,21,649	0/0:33,0:36:66.22:0,66,2354	1/1:26,0:26:12.12:560,12,0	1/1:24,0:24:6.02:296,6,0	1/1:18,5:27:6.02:417,6,0	0/0:19,0:20:33:0,33,1175	1/1:13,0:26:12.04:348,12,0	1/1:16,0:16:18.06:726,18,0	1/1:17,0:13:18.02:300,18,0	1/1:15,0:15:8.30:148,8,0	1/1:25,0:22:9.03:158,9,0	1/1:29,0:26:17.34:533,17,0	0/0:4,4:13:0:0,0,0	1/1:31,0:30:10.25:122,10,0	1/1:13,0:27:3.01:147,3,0	0/0:24,0:25:21.98:0,22,1442	1/1:17,0:16:6.90:80,7,0	0/0:9,0:12:26.96:0,27,795
chr10	102788416	.	CCTG	C	5053.24	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.894;DP=575;FS=1.839;HRun=0;HaplotypeScore=82.3450;InbreedingCoeff=0.9985;MQ=74.55;MQ0=0;MQRankSum=-4.146;QD=45.12;ReadPosRankSum=-0.285;VQSLOD=6.3443;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,141,3247	0/0:9,0:9:27.09:0,27,638	0/0:17,0:17:29.93:0,30,776	0/0:11,0:11:33.09:0,33,703	0/0:15,0:15:45.15:0,45,1028	0/0:17,0:17:51.17:0,51,1180	0/0:32,0:32:96.32:0,96,2169	1/1:1,32:33:90.29:1551,90,0	0/0:26,0:26:75.24:0,75,1709	0/0:25,0:25:72.25:0,72,1666	0/0:11,0:11:30.07:0,30,616	0/0:16,0:16:48.16:0,48,1108	0/0:21,0:21:60.19:0,60,1346	0/0:18,0:18:54.17:0,54,1225	0/0:28,0:28:84.29:0,84,1970	0/0:13,0:13:39.13:0,39,922	0/0:29,0:29:87.28:0,87,1959	0/0:23,0:23:66.21:0,66,1491	1/1:0,14:14:39.13:682,39,0	1/1:0,21:21:51.17:899,51,0	1/1:1,27:28:69.17:1181,69,0	0/0:16,0:16:48.15:0,48,1080	0/0:14,0:14:42.14:0,42,976	0/0:31,0:31:90.31:0,90,2085	0/0:8,0:8:24.08:0,24,568	0/0:25,0:25:75.26:0,75,1751	1/1:0,16:16:42.14:740,42,0	0/0:8,0:8:24.07:0,24,520
chr10	102788682	.	CCA	C	466.15	PASS	AB=0.876;AC=14;AF=0.250;AN=56;BaseQRankSum=5.961;DP=681;FS=2.020;HRun=0;HaplotypeScore=89.5257;InbreedingCoeff=-0.3537;MQ=63.26;MQ0=4;MQRankSum=1.120;QD=1.36;ReadPosRankSum=0.305;VQSLOD=1.6066;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,1:42:1.03:0,1,599	0/0:12,0:12:15.05:0,15,230	0/0:38,0:17:0.94:0,1,2	0/0:28,0:10:3.01:0,3,39	0/0:16,0:16:26.94:0,27,343	0/1:12,5:18:82.71:83,0,216	0/1:31,5:36:62.66:63,0,398	0/0:21,0:20:15.02:0,15,156	0/0:22,0:24:21.76:0,22,451	0/1:17,2:19:46.13:46,0,160	0/1:9,1:10:21.88:22,0,122	0/1:16,4:20:25.70:26,0,500	0/1:18,2:20:14.94:15,0,356	0/1:13,1:14:1.76:2,0,383	0/1:31,4:35:72.15:72,0,754	0/1:21,1:24:55.20:55,0,535	0/1:32,3:35:32.54:33,0,823	0/1:24,2:26:20.91:21,0,522	0/0:19,0:19:9:0,9,89	0/0:16,0:16:2.02:0,2,60	0/0:44,0:43:5.99:0,6,49	0/0:20,0:20:26.82:0,27,473	0/0:14,0:14:20.74:0,21,263	0/1:48,6:54:28.57:29,0,1223	0/0:22,0:22:24.08:0,24,367	0/1:19,3:22:93.31:93,0,346	0/0:20,0:20:15.01:0,15,154	0/1:6,3:10:52.81:53,0,103
chr10	102788687	.	C	CACACAT	1620.08	PASS	AB=0.665;AC=8;AF=0.143;AN=56;BaseQRankSum=-1.176;DP=773;FS=2.733;HRun=0;HaplotypeScore=166.2946;InbreedingCoeff=0.4960;MQ=59.38;MQ0=4;MQRankSum=-2.175;QD=10.59;ReadPosRankSum=-2.769;VQSLOD=2.6185;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,101,1238	0/0:11,0:11:24.01:0,24,412	0/0:44,0:17:26.41:0,26,244	0/0:36,0:11:14.21:0,14,162	0/0:19,0:19:41.89:0,42,575	0/0:18,0:18:44.54:0,45,591	0/0:37,0:37:75.08:0,75,1066	1/1:20,0:24:62.90:736,63,0	0/0:25,0:25:59.75:0,60,884	0/0:23,0:23:56.50:0,56,619	0/0:12,0:12:18.93:0,19,278	0/0:26,0:26:54.04:0,54,937	0/0:23,0:22:60.46:0,60,821	0/0:16,0:16:44.09:0,44,730	0/0:39,0:39:99:0,107,1659	0/0:27,0:27:71.93:0,72,1065	0/0:37,0:37:96.12:0,96,1664	0/0:27,0:27:60.76:0,61,1098	1/1:8,11:20:39.11:451,39,0	0/1:2,13:18:17.95:96,0,18	0/1:12,40:53:2.18:142,0,2	0/0:24,0:24:62.03:0,62,870	0/0:16,0:16:35.88:0,36,437	0/0:57,0:57:99:0,146,2289	0/0:29,0:29:63.02:0,63,862	0/0:29,0:29:79.42:0,79,982	0/1:6,18:25:14.38:297,0,14	0/1:11,0:11:46.60:47,0,298
chr10	102789107	.	CT	C	2083.23	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.063;DP=625;FS=0.415;HRun=10;HaplotypeScore=66.2688;InbreedingCoeff=0.9867;MQ=78.87;MQ0=0;MQRankSum=-2.623;QD=18.44;ReadPosRankSum=-0.082;VQSLOD=4.1133;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,1:41:88.07:0,88,1174	0/0:9,0:9:23.80:0,24,245	0/0:19,0:19:34.19:0,34,315	0/0:18,0:17:15.18:0,15,204	0/0:36,0:36:72.18:0,72,788	0/0:20,0:20:51.13:0,51,557	0/0:20,1:21:28.09:0,28,538	1/1:7,13:20:12.89:286,13,0	0/0:15,0:15:45.12:0,45,498	0/0:11,0:11:18.04:0,18,193	0/0:20,0:20:51.13:0,51,557	0/0:27,0:27:75.19:0,75,823	0/0:23,1:24:37.31:0,37,622	0/0:21,0:22:53.98:0,54,578	0/0:16,0:16:48.13:0,48,531	0/0:26,0:26:66.18:0,66,730	0/0:38,1:39:79.23:0,79,1101	0/0:28,0:29:80.94:0,81,838	1/1:5,21:26:62.94:538,63,0	1/1:3,23:26:62.97:547,63,0	1/1:1,14:15:38.99:339,39,0	0/0:24,0:24:63.17:0,63,697	0/0:13,0:15:36.39:0,36,372	0/0:27,0:27:71.96:0,72,761	0/0:14,0:14:30.07:0,30,325	0/0:29,0:29:63.14:0,63,676	1/1:1,25:26:62.98:547,63,0	0/0:10,0:10:21.04:0,21,223
chr10	102789928	.	GTTGGTTGA	G	7169.05	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=17.077;DP=673;FS=8.038;HRun=0;HaplotypeScore=179.6751;InbreedingCoeff=0.0545;MQ=63.87;MQ0=7;MQRankSum=-8.250;QD=15.79;ReadPosRankSum=2.788;VQSLOD=3.2273;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:99:145,0,153	0/1:8,0:8:12.17:98,0,12	0/0:28,0:23:47.99:0,48,609	0/0:30,0:25:68.25:0,68,918	0/0:29,0:29:84.16:0,84,2474	0/1:28,0:28:69.02:406,0,69	0/1:29,0:29:38.17:38,0,258	1/1:3,29:32:86.97:895,87,0	0/1:36,0:36:99:530,0,168	0/0:31,0:31:84.21:0,84,2369	0/0:19,0:18:42.07:0,42,1332	0/0:15,0:15:45.12:0,45,1520	0/1:23,0:23:99:236,0,124	0/1:14,0:14:88.90:159,0,89	0/1:29,0:29:99:439,0,111	0/0:24,0:24:72.16:0,72,2451	0/1:20,0:20:99:214,0,145	1/1:8,0:8:9.03:109,9,0	1/1:4,27:29:81.04:1382,81,0	1/1:1,19:20:56.66:974,57,0	1/1:1,30:31:17.62:249,18,0	0/1:26,0:25:82.21:82,0,179	0/1:18,0:18:26.93:288,0,27	0/1:32,0:32:99:189,0,122	0/1:18,0:18:99:147,0,154	0/0:27,0:27:74.36:0,74,2289	1/1:0,21:21:21.07:590,21,0	0/0:16,0:16:45.95:0,46,1199
chr10	102789932	.	GTTGATTGATTGA	G	10281.18	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=6.156;DP=659;FS=5.430;HRun=0;HaplotypeScore=208.3964;InbreedingCoeff=0.9587;MQ=59.29;MQ0=9;MQRankSum=-11.274;QD=34.73;ReadPosRankSum=1.867;VQSLOD=4.1566;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,21:30:24.08:666,24,0	1/1:2,7:9:8.71:314,9,0	0/0:27,0:22:33.05:0,33,862	0/0:32,0:27:29.20:0,29,880	0/0:28,0:28:69.16:0,69,3143	1/1:5,22:27:39.13:1329,39,0	1/1:11,17:28:15.05:421,15,0	0/0:29,0:29:33.03:0,33,407	1/1:10,27:37:51.17:1748,51,0	0/0:28,0:28:51.18:0,51,2791	0/0:15,0:14:30.10:0,30,1652	0/0:16,0:16:39.13:0,39,1956	1/1:7,16:23:23.97:772,24,0	1/1:6,8:13:15.05:524,15,0	1/1:7,20:27:39.13:1363,39,0	0/0:24,0:24:57.20:0,57,3108	0/0:9,0:21:6.73:0,7,61	1/1:0,8:8:9.03:314,9,0	0/0:31,0:28:49.38:0,49,375	0/0:20,0:20:38.56:0,39,234	0/0:30,0:30:13.12:0,13,69	1/1:6,20:25:27.09:620,27,0	1/1:3,14:17:29.59:971,30,0	1/1:8,24:32:21.03:649,21,0	1/1:6,12:18:21.07:592,21,0	0/0:25,0:25:57.18:0,57,2845	0/0:21,0:21:14.70:0,15,45	0/0:16,0:16:33.11:0,33,1379
chr10	102792475	.	GCACA	G	6900.93	PASS	AB=0.625;AC=25;AF=0.446;AN=56;BaseQRankSum=1.403;DP=916;FS=3.880;HRun=0;HaplotypeScore=236.1633;InbreedingCoeff=0.7679;MQ=51.32;MQ0=18;MQRankSum=-0.100;QD=16.51;ReadPosRankSum=2.945;VQSLOD=4.0794;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,28:45:51.17:799,51,0	0/1:5,5:10:0.41:149,0,0	0/0:41,0:19:5.45:0,5,75	0/0:41,0:18:9.03:0,9,120	0/0:30,0:28:10.26:0,10,221	1/1:8,24:32:67.88:958,68,0	1/1:14,10:26:12.94:287,13,0	0/0:43,0:46:70.82:0,71,1034	1/1:9,20:29:45.14:694,45,0	0/0:55,0:55:99:0,117,2209	0/0:25,0:26:23.71:0,24,473	0/0:32,0:36:68:0,68,1510	1/1:8,16:25:38.13:616,38,0	1/1:9,22:31:44.98:630,45,0	1/1:5,11:18:20.98:325,21,0	0/0:19,0:20:36.12:0,36,835	0/1:12,2:37:23.36:23,0,155	1/1:10,15:23:8.70:541,9,0	0/0:14,0:17:24.04:0,24,373	0/0:16,0:32:37.01:0,37,645	0/0:29,0:60:86.91:0,87,1372	1/1:16,21:34:27:376,27,0	0/1:9,15:23:13.93:243,0,14	1/1:18,30:49:60.04:975,60,0	1/1:7,16:24:26.72:285,27,0	0/0:43,1:45:9.03:0,9,1402	0/0:10,0:16:27.09:0,27,493	0/0:11,0:14:15.05:0,15,362
chr10	102792638	.	ACAC	A	942.44	PASS	AB=0.972;AC=19;AF=0.339;AN=56;BaseQRankSum=7.459;DP=882;FS=35.825;HRun=0;HaplotypeScore=282.6403;InbreedingCoeff=-0.3155;MQ=30.05;MQ0=147;MQRankSum=-3.311;QD=2.01;ReadPosRankSum=-1.809;VQSLOD=1.3823;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:25:14.08:14,0,171	0/1:6,2:7:18.30:18,0,41	0/0:102,0:6:6.18:0,6,56	0/0:95,0:5:5.99:0,6,90	1/1:22,0:17:3.19:13,3,0	0/0:18,1:19:29.41:0,29,217	0/0:15,0:13:5.15:0,5,79	0/1:44,2:31:99:237,0,127	0/0:21,0:15:16.50:0,17,71	0/1:39,1:30:74.17:147,0,74	0/1:21,0:21:21.60:22,0,89	0/0:26,0:23:11.34:0,11,200	0/0:13,0:8:10.51:0,11,159	0/0:23,0:18:23.14:0,23,267	0/1:20,0:12:60.32:60,0,91	0/1:17,0:12:12.51:91,0,13	0/1:17,0:12:70.98:71,0,90	0/1:21,0:17:83.96:84,0,131	0/1:38,1:21:66.45:66,0,111	0/1:24,1:17:24.56:40,0,25	0/1:87,0:66:99:175,0,162	0/1:30,3:24:14.32:14,0,124	0/0:21,4:19:18:0,18,130	0/0:37,1:31:24.83:0,25,150	0/0:32,1:27:0.97:0,1,217	0/1:34,0:18:35.87:36,0,142	0/1:8,0:5:0.96:1,0,29	1/1:1,0:1:0.89:2,1,0
chr10	102792645	.	AC	A	4542.97	PASS	AB=0.744;AC=43;AF=0.768;AN=56;BaseQRankSum=-2.720;DP=738;FS=71.810;HRun=2;HaplotypeScore=214.6413;InbreedingCoeff=0.0460;MQ=29.06;MQ0=148;MQRankSum=2.690;QD=8.26;ReadPosRankSum=2.444;VQSLOD=0.5357;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,4:22:1.55:175,2,0	1/1:4,2:5:8.92:110,9,0	0/0:89,0:4:6.18:0,6,47	0/0:88,0:6:6.94:0,7,98	1/1:13,5:14:3.94:34,4,0	0/1:5,9:14:14.75:269,0,15	1/1:7,4:10:6.09:113,6,0	0/1:24,13:25:35.72:400,0,36	1/1:9,10:13:3.62:255,4,0	0/1:20,10:20:69.77:209,0,70	1/1:8,7:15:14.50:133,15,0	1/1:12,11:20:17.63:299,18,0	0/0:7,3:5:0.70:0,1,41	1/1:8,13:16:18.01:192,18,0	1/1:9,7:9:15.04:169,15,0	1/1:9,3:7:16.47:177,16,0	0/1:12,2:9:27.09:97,0,27	0/1:11,8:15:12.47:238,0,12	1/1:32,3:18:9.53:185,10,0	1/1:10,7:10:1.39:11,1,0	1/1:56,18:53:41.60:367,42,0	0/1:15,14:21:58.34:122,0,58	1/1:14,9:18:0.48:73,0,0	0/1:24,5:22:6.46:66,0,6	1/1:13,12:19:35.77:407,36,0	1/1:20,7:13:10.16:243,10,0	1/1:5,3:5:15.01:163,15,0	1/1:0,1:1:3.01:36,3,0
chr10	102792649	.	CA	C	1021.35	PASS	AB=0.997;AC=33;AF=0.589;AN=56;BaseQRankSum=-6.441;DP=644;FS=182.085;HRun=1;HaplotypeScore=195.8557;InbreedingCoeff=-0.0381;MQ=28.18;MQ0=143;MQRankSum=2.520;QD=2.21;ReadPosRankSum=2.031;VQSLOD=-0.3637;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:16:9.45:9,0,61	0/1:4,0:3:6.53:28,0,7	0/0:80,1:3:6.49:0,6,80	0/1:77,0:6:1.87:2,0,70	1/1:15,0:12:1.56:5,2,0	0/1:11,0:11:24.20:103,0,24	1/1:8,1:8:7.48:45,7,0	0/1:34,0:24:99:113,0,177	0/1:18,0:12:1.84:104,0,2	0/1:24,1:15:36.72:37,0,191	0/1:12,0:12:16.78:17,0,61	1/1:18,1:16:8.73:117,9,0	0/0:9,0:4:2.93:0,3,48	1/1:18,0:13:13.33:71,13,0	1/1:15,0:8:12.06:57,12,0	1/1:7,1:5:9.81:68,10,0	0/0:11,0:6:3.81:0,4,105	0/1:18,0:14:56.95:83,0,57	0/1:33,0:16:22.89:23,0,76	0/0:13,1:8:0.26:0,0,1	0/0:63,1:45:13.83:0,14,167	0/1:28,0:20:17.20:17,0,85	1/1:17,1:13:4.77:36,5,0	0/1:23,0:16:2.01:2,0,21	1/1:21,0:15:25.08:145,25,0	0/1:25,0:11:19.76:20,0,60	1/1:7,0:4:11.17:64,11,0	1/1:1,0:1:2.88:15,3,0
chr10	102792653	.	CA	C	1243.31	PASS	AB=0.984;AC=24;AF=0.429;AN=56;BaseQRankSum=1.630;DP=568;FS=5.701;HRun=1;HaplotypeScore=174.7623;InbreedingCoeff=-0.1822;MQ=30.16;MQ0=134;MQRankSum=-0.066;QD=3.54;ReadPosRankSum=3.062;VQSLOD=0.4989;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:13:33.71:34,0,64	1/1:4,0:3:5.67:62,6,0	0/0:71,0:2:5.23:0,5,45	0/0:71,0:7:6.44:0,6,124	0/1:11,0:8:0.06:1,0,0	0/1:11,0:11:46.37:102,0,46	0/1:8,1:8:8.81:9,0,9	0/1:29,0:22:99:147,0,124	0/1:16,0:11:1.68:87,0,2	0/1:22,0:13:41.45:41,0,167	0/1:12,0:12:20.73:21,0,35	1/1:16,1:14:22.50:256,22,0	0/0:8,0:3:2.91:0,3,48	0/0:15,0:12:5.43:0,5,25	0/1:12,0:7:12.19:42,0,12	1/1:8,0:5:7.35:66,7,0	0/1:11,0:6:17.20:17,0,113	0/1:16,0:12:59.38:102,0,59	0/1:27,2:14:80.97:83,0,81	0/0:14,0:8:0.26:0,0,1	0/1:60,0:42:95.76:97,0,96	0/0:19,2:15:7.79:0,8,60	0/0:14,0:10:5.38:0,5,15	0/1:17,2:13:0.65:14,0,1	0/1:18,0:14:9.54:100,0,10	0/1:23,0:9:41.29:41,0,48	1/1:7,0:4:11.44:72,11,0	0/0:1,0:1:1.25:0,1,3
chr10	102792655	.	CA	C	1483.72	PASS	AB=0.786;AC=32;AF=0.593;AN=54;BaseQRankSum=-3.152;DP=499;FS=97.425;HRun=1;HaplotypeScore=165.1725;InbreedingCoeff=-0.0057;MQ=30.64;MQ0=111;MQRankSum=0.950;QD=4.28;ReadPosRankSum=4.193;VQSLOD=-0.4565;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,2:13:23.64:24,0,52	1/1:2,2:3:6.01:74,6,0	0/1:70,0:2:19.31:19,0,33	0/0:66,0:5:7.26:0,7,75	0/1:7,2:8:0.04:1,0,0	0/1:2,4:7:32.76:133,0,33	1/1:6,0:5:0.47:1,0,0	0/1:13,0:19:63.39:231,0,63	1/1:5,3:10:9.49:112,9,0	0/1:14,1:12:85.85:87,0,86	1/1:5,2:9:4.98:42,5,0	1/1:5,8:13:18.94:223,19,0	0/0:6,0:3:2.93:0,3,48	0/1:5,6:11:0.52:21,0,1	1/1:7,3:6:1.64:46,2,0	1/1:4,0:3:6.01:86,6,0	0/1:10,0:6:9.06:9,0,99	0/1:8,3:12:53.27:139,0,53	0/1:24,1:12:45.77:68,0,46	0/0:6,2:6:0.47:0,0,1	0/0:47,4:39:28.88:0,29,199	0/1:12,3:11:0.62:1,0,9	0/0:6,2:9:0.94:0,1,2	1/1:14,0:13:0.47:1,0,0	1/1:6,5:9:11.22:146,11,0	0/1:15,1:8:2.09:90,0,2	1/1:5,2:4:4.25:70,4,0	./.
chr10	102792669	.	CGTG	C	370.80	PASS	AB=0.593;AC=23;AF=0.605;AN=38;BaseQRankSum=1.466;DP=170;FS=1.949;HRun=0;HaplotypeScore=65.8493;InbreedingCoeff=0.3309;MQ=44.13;MQ0=41;MQRankSum=1.414;QD=5.70;ReadPosRankSum=-1.106;VQSLOD=1.8857;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,4:5:0.47:1,0,0	./.	./.	0/0:36,0:5:5.98:0,6,143	1/1:0,2:2:0.89:2,1,0	0/0:1,4:5:3.01:0,3,73	./.	0/0:2,0:2:3.01:0,3,53	./.	1/1:1,2:2:6.02:95,6,0	1/1:0,4:4:2.94:18,3,0	./.	0/0:1,0:1:3.01:0,3,74	1/1:0,6:6:3.01:37,3,0	0/1:0,3:3:0:0,0,0	./.	0/0:3,0:1:3.01:0,3,74	0/1:4,3:5:58.41:58,0,70	1/1:1,1:2:5.98:57,6,0	0/1:1,2:2:0:0,0,0	1/1:5,8:14:8.68:81,9,0	./.	0/1:0,3:3:0:0,0,0	0/1:2,1:3:0:0,0,0	./.	1/1:1,1:1:3.01:39,3,0	1/1:0,2:2:6.02:89,6,0	./.
chr10	102792763	.	C	CAT	234.02	PASS	AB=0.951;AC=5;AF=0.089;AN=56;BaseQRankSum=8.221;DP=701;FS=75.212;HRun=0;HaplotypeScore=236.9774;InbreedingCoeff=0.1184;MQ=30.57;MQ0=44;MQRankSum=-3.656;QD=2.34;ReadPosRankSum=-1.670;VQSLOD=-0.3758;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:29.11:0,29,426	0/0:11,0:9:6.02:0,6,82	0/0:57,0:1:2.98:0,3,22	0/0:43,0:3:1.28:0,1,11	0/0:17,0:17:26.64:0,27,350	0/0:18,0:16:23.11:0,23,388	0/0:22,0:21:8.68:0,9,464	0/1:54,7:50:99:253,0,958	0/0:18,0:17:27.73:0,28,452	0/0:29,0:26:66.37:0,66,885	0/0:13,0:12:5.47:0,5,91	0/0:30,0:28:18.63:0,19,510	0/0:13,0:12:23.70:0,24,353	0/1:21,1:21:25.44:25,0,441	0/1:15,0:12:13.80:14,0,72	0/0:14,0:12:17.88:0,18,309	0/0:21,0:21:37.68:0,38,471	0/0:15,0:15:6.95:0,7,364	0/0:28,0:12:18.36:0,18,219	0/0:18,0:15:9.79:0,10,140	0/0:77,0:62:21.34:0,21,336	0/0:15,0:13:14.85:0,15,219	0/0:15,0:14:14.86:0,15,164	0/0:38,0:34:12.67:0,13,147	0/0:16,0:16:26.80:0,27,396	0/0:31,1:32:38.61:0,39,910	0/0:7,0:7:17.39:0,17,184	1/1:2,0:2:3.01:51,3,0
chr10	102792781	.	A	AC	190.74	PASS	AB=0.968;AC=12;AF=0.214;AN=56;BaseQRankSum=10.157;DP=923;FS=93.653;HRun=1;HaplotypeScore=327.4450;InbreedingCoeff=-0.1439;MQ=34.15;MQ0=52;MQRankSum=-6.248;QD=0.45;ReadPosRankSum=-3.884;VQSLOD=-0.4895;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:36:67.06:67,0,413	0/0:9,0:7:6.02:0,6,78	0/0:50,0:2:3.01:0,3,39	0/0:63,0:7:5.83:0,6,55	0/0:21,0:21:38.55:0,39,482	0/0:25,0:24:17.99:0,18,409	0/0:29,0:28:29.69:0,30,533	0/1:85,0:68:99:107,0,1541	0/1:25,1:23:53.75:54,0,245	0/0:40,1:36:11.26:0,11,892	0/0:18,2:18:10.88:0,11,154	0/0:40,0:35:32.80:0,33,638	0/1:19,1:19:6.34:6,0,370	0/0:31,1:29:10.56:0,11,586	0/0:22,0:18:12.49:0,12,273	0/1:19,2:17:8.71:9,0,349	0/1:33,0:32:22.03:22,0,568	0/1:22,0:22:4.25:4,0,390	0/0:26,0:15:34.55:0,35,409	0/0:23,0:21:16.22:0,16,231	0/1:98,6:81:8.85:9,0,194	0/0:21,0:18:23.86:0,24,297	0/0:18,0:17:17.14:0,17,202	0/1:50,0:47:12.09:12,0,176	0/1:20,2:21:11.84:12,0,357	0/0:42,1:41:23.92:0,24,970	0/0:11,0:11:25.06:0,25,333	1/1:5,0:5:1.44:28,1,0
chr10	102792813	.	C	CCA	5966.55	PASS	AB=0.908;AC=25;AF=0.446;AN=56;BaseQRankSum=-1.639;DP=1159;FS=34.984;HRun=0;HaplotypeScore=446.3414;InbreedingCoeff=-0.3859;MQ=38.99;MQ0=70;MQRankSum=-1.508;QD=6.49;ReadPosRankSum=3.288;VQSLOD=2.9912;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:39,6:42:24.95:501,0,25	0/1:11,0:11:26.22:46,0,26	0/1:73,0:9:6.21:6,0,26	0/1:84,0:12:11.17:11,0,77	0/0:29,0:28:29.74:0,30,375	0/1:27,6:32:64.03:483,0,64	0/1:41,3:42:64.58:395,0,65	0/1:72,3:58:50.92:51,0,880	0/1:28,2:28:35.87:259,0,36	0/0:51,0:44:88.23:0,88,1131	0/0:30,0:27:18.52:0,19,278	0/0:42,0:41:60.27:0,60,687	0/1:26,7:28:79.84:433,0,80	0/1:32,8:37:47.07:509,0,47	1/1:24,11:30:0.42:414,0,0	0/0:29,0:24:35.65:0,36,370	0/1:34,4:37:29.57:615,0,30	1/1:23,8:29:32.54:642,33,0	0/1:34,1:22:99:154,0,195	0/1:34,7:39:53.19:192,0,53	0/1:95,6:88:99:123,0,126	0/1:19,5:23:39.03:259,0,39	1/1:14,3:16:8.02:235,8,0	0/1:49,9:54:58.28:216,0,58	0/1:19,5:23:42.52:263,0,43	0/0:54,0:50:85.54:0,86,1104	0/1:15,1:16:98.80:158,0,99	0/1:12,0:11:1.77:2,0,148
chr10	102792823	.	ACAC	A	2763.86	PASS	AB=0.954;AC=21;AF=0.375;AN=56;BaseQRankSum=3.859;DP=1216;FS=14.966;HRun=0;HaplotypeScore=475.7733;InbreedingCoeff=-0.3107;MQ=37.02;MQ0=103;MQRankSum=-1.575;QD=4.00;ReadPosRankSum=-0.287;VQSLOD=0.1935;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:45,1:41:24.20:338,0,24	1/1:13,0:13:20.56:124,21,0	0/0:103,0:8:11.95:0,12,115	0/0:99,0:11:9.28:0,9,151	0/0:27,0:25:28.50:0,28,671	0/1:32,1:32:62.56:327,0,63	0/1:38,5:39:37.17:234,0,37	0/0:66,2:53:73.48:0,73,1666	0/1:29,3:29:75.83:130,0,76	0/0:56,0:49:77.48:0,77,1891	0/0:33,0:30:10.62:0,11,423	0/0:46,0:43:71.64:0,72,1209	0/1:33,2:30:75.02:75,0,89	0/1:37,3:36:75.65:252,0,76	0/1:35,1:31:13.37:237,0,13	0/0:30,0:26:15.22:0,15,642	0/1:37,0:35:71.64:189,0,72	0/1:33,1:32:14.73:263,0,15	0/1:35,1:23:99:108,0,322	0/1:43,1:42:50.76:51,0,99	0/1:106,2:86:30.45:30,0,170	0/1:21,1:20:73.56:137,0,74	1/1:17,0:14:9.51:94,10,0	0/1:57,5:55:17.86:103,0,18	0/1:22,3:23:45.08:140,0,45	0/0:62,0:52:44.29:0,44,1883	0/1:14,1:15:65.78:66,0,141	0/1:12,0:12:34.28:34,0,316
chr10	102792831	.	CCA	C	2991.49	PASS	AB=0.867;AC=33;AF=0.589;AN=56;BaseQRankSum=1.264;DP=1178;FS=6.626;HRun=0;HaplotypeScore=457.3466;InbreedingCoeff=0.2244;MQ=34.78;MQ0=107;MQRankSum=-1.566;QD=3.66;ReadPosRankSum=0.155;VQSLOD=0.7786;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,8:38:30.88:158,0,31	1/1:11,0:14:3.25:59,3,0	0/0:102,0:6:3.01:0,3,50	0/1:101,0:8:16.56:17,0,44	0/0:27,0:26:17.29:0,17,350	0/1:20,7:32:45.78:125,0,46	0/1:29,7:37:38.96:92,0,39	1/1:43,11:44:15.86:604,16,0	0/1:20,7:27:17.58:102,0,18	0/0:57,0:50:35.71:0,36,774	0/0:33,0:32:17.62:0,18,249	0/0:41,0:44:15.66:0,16,362	1/1:26,4:27:5:125,5,0	0/1:22,10:32:33.51:150,0,34	1/1:24,10:31:5.52:113,6,0	0/0:32,0:28:2.71:0,3,274	1/1:24,5:35:29.68:373,30,0	1/1:21,8:30:33.20:286,33,0	1/1:29,4:19:23.82:275,24,0	1/1:27,12:39:2.54:85,3,0	1/1:78,20:82:13.66:178,14,0	0/1:18,3:21:2.34:66,0,2	1/1:17,3:15:6.80:109,7,0	0/1:39,13:51:0.86:86,0,1	1/1:21,4:23:4.55:31,5,0	0/0:60,0:49:30.54:0,31,832	1/1:10,1:11:14.01:124,14,0	0/1:13,0:14:14.63:15,0,220
chr10	102792844	.	CAG	C	2836.08	PASS	AB=0.975;AC=43;AF=0.768;AN=56;BaseQRankSum=7.908;DP=1092;FS=16.707;HRun=0;HaplotypeScore=418.4388;InbreedingCoeff=0.1448;MQ=31.88;MQ0=96;MQRankSum=-5.666;QD=2.93;ReadPosRankSum=-1.393;VQSLOD=0.5460;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,2:30:11.30:117,11,0	1/1:15,0:16:25.99:161,26,0	0/0:92,0:4:4.88:0,5,70	0/1:95,0:5:1.78:2,0,47	0/1:31,1:29:0.11:0,0,260	0/1:28,0:27:0.39:123,0,0	0/1:37,0:35:12.87:98,0,13	1/1:47,0:38:6.11:270,6,0	1/1:26,2:26:6.45:136,6,0	0/1:48,1:44:97.79:98,0,579	0/0:32,0:32:14.37:0,14,223	0/1:46,0:44:99:134,0,263	1/1:25,2:22:22.09:151,22,0	1/1:34,0:32:13.19:122,13,0	1/1:33,1:29:28.96:145,29,0	0/1:28,1:24:48.58:49,0,280	1/1:36,2:36:30.06:234,30,0	1/1:25,0:24:37.46:205,37,0	1/1:21,0:14:28.20:179,28,0	1/1:35,1:37:9.42:45,9,0	1/1:84,1:69:6.11:55,6,0	1/1:23,1:22:21.09:134,21,0	1/1:19,1:16:11.91:65,12,0	1/1:57,2:50:7.54:121,8,0	1/1:20,1:19:5.69:62,6,0	0/1:62,1:50:99:116,0,675	1/1:7,1:9:15.23:90,15,0	0/1:16,0:16:80.43:80,0,168
chr10	102792846	.	GAC	G	471.21	PASS	AB=0.984;AC=20;AF=0.357;AN=56;BaseQRankSum=4.506;DP=1074;FS=6.653;HRun=0;HaplotypeScore=426.1481;InbreedingCoeff=0.1121;MQ=30.89;MQ0=93;MQRankSum=-3.641;QD=1.10;ReadPosRankSum=-0.560;VQSLOD=0.7068;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:32:8.39:0,8,36	1/1:18,0:17:3.73:23,4,0	0/0:89,0:4:11.65:0,12,86	0/0:96,0:4:5.85:0,6,58	0/1:31,1:29:14.67:15,0,202	0/0:30,0:29:7.11:0,7,76	0/0:38,0:34:9.49:0,9,55	1/1:35,10:36:0.46:279,0,0	0/1:28,0:26:1.14:1,0,52	0/0:47,1:42:6.53:0,7,563	0/0:31,0:31:17.21:0,17,208	0/1:43,1:41:36.04:36,0,272	0/1:28,0:23:8.53:9,0,38	0/0:35,0:33:1.71:0,2,22	0/0:32,0:28:0.19:0,0,6	0/0:29,0:24:18.12:0,18,356	0/1:32,1:32:4.38:4,0,64	0/1:27,0:25:0.86:1,0,46	1/1:19,2:14:16.07:156,16,0	0/0:34,3:35:5.24:0,5,27	0/0:67,8:68:0.25:0,0,2	0/1:26,0:23:5.43:5,0,11	1/1:22,0:16:0.31:1,0,0	0/1:54,0:48:6.93:7,0,8	0/1:23,0:21:6.12:6,0,6	0/0:60,0:47:49.44:0,49,826	1/1:7,1:8:9.34:57,9,0	0/1:16,1:16:15.47:15,0,181
chr10	102792863	.	ACG	A	1766.02	PASS	AB=0.961;AC=34;AF=0.607;AN=56;BaseQRankSum=9.498;DP=946;FS=26.703;HRun=0;HaplotypeScore=358.9067;InbreedingCoeff=-0.0942;MQ=29.36;MQ0=57;MQRankSum=-5.751;QD=2.54;ReadPosRankSum=-2.121;VQSLOD=0.9149;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,2:24:11.39:11,0,40	1/1:15,0:14:19.23:100,19,0	0/0:63,0:5:5.32:0,5,49	0/0:82,0:2:5.86:0,6,37	0/0:33,0:32:4.51:0,5,141	0/1:25,1:26:50.29:50,0,77	0/1:40,0:36:6.70:44,0,7	1/1:42,1:35:23.45:300,23,0	0/1:21,2:24:19.49:35,0,19	0/1:45,0:40:99:132,0,535	0/1:29,0:29:1.99:2,0,146	0/1:41,0:37:99:128,0,191	0/1:24,0:21:16.37:48,0,16	1/1:27,0:27:22.13:128,22,0	1/1:26,0:23:9.91:46,10,0	0/1:26,0:23:0.02:0,0,377	0/1:18,4:23:68.32:68,0,98	0/1:20,0:18:18.10:57,0,18	1/1:10,2:9:17.82:160,18,0	1/1:31,6:34:11.98:85,12,0	0/0:69,1:50:2.72:0,3,18	1/1:28,0:25:10.45:71,10,0	1/1:23,0:16:5.91:39,6,0	0/1:36,2:32:11.48:43,0,11	1/1:22,0:19:2.67:51,3,0	0/1:63,1:53:95.34:95,0,709	1/1:10,1:10:8.79:108,9,0	0/1:16,0:15:99:130,0,175
chr10	102792864	.	CG	C	2459.96	PASS	AB=0.828;AC=22;AF=0.393;AN=56;BaseQRankSum=12.432;DP=929;FS=164.480;HRun=1;HaplotypeScore=339.4475;InbreedingCoeff=-0.6452;MQ=29.57;MQ0=53;MQRankSum=-7.654;QD=3.99;ReadPosRankSum=0.524;VQSLOD=0.0131;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,6:24:99:111,0,181	0/1:6,6:14:2.49:173,0,2	0/0:65,0:5:15.03:0,15,173	0/0:77,1:2:6.02:0,6,94	0/0:28,6:33:26.71:0,27,308	0/1:21,3:26:99:112,0,200	0/1:30,7:35:99:121,0,117	0/0:44,0:36:49.75:0,50,509	0/1:19,5:24:56.65:197,0,57	0/1:37,8:41:99:198,0,819	0/1:22,6:30:6.28:6,0,193	0/1:36,3:37:99:160,0,410	0/1:22,3:21:99:188,0,125	0/1:20,5:26:61.33:84,0,61	0/1:23,0:21:67.97:85,0,68	0/1:21,1:21:15.72:16,0,511	0/1:20,2:22:99:116,0,311	0/1:13,3:16:95.31:95,0,104	0/1:11,1:9:24.92:27,0,25	0/1:27,7:31:20.62:21,0,30	0/0:63,5:49:2.38:0,2,41	0/1:20,8:26:67.85:72,0,68	0/0:17,5:16:2.49:0,2,32	0/1:27,7:31:37.45:58,0,37	0/1:13,9:19:14.84:112,0,15	0/1:50,14:53:99:436,0,1025	0/1:10,1:10:45.76:46,0,75	0/1:10,5:15:99:177,0,215
chr10	102792869	.	ACACACAC	A	1191.77	PASS	AB=0.980;AC=20;AF=0.370;AN=54;BaseQRankSum=1.802;DP=957;FS=1.376;HRun=0;HaplotypeScore=385.9066;InbreedingCoeff=-0.0243;MQ=29.05;MQ0=73;MQRankSum=-3.591;QD=2.51;ReadPosRankSum=-0.733;VQSLOD=1.1130;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,1:22:51.09:55,0,51	0/0:16,0:14:19.54:0,20,144	0/0:59,0:4:3.01:0,3,78	./.	0/0:35,0:33:14.81:0,15,295	0/1:26,1:25:2.81:3,0,13	0/1:34,2:32:91.28:125,0,91	0/1:49,1:37:19.40:436,0,19	0/0:25,1:24:9.38:0,9,124	0/0:47,0:41:76.04:0,76,1613	0/1:32,0:31:2.63:3,0,436	0/0:45,0:40:9.04:0,9,514	0/1:28,0:25:72.40:72,0,134	0/1:25,0:25:45.12:70,0,45	0/1:25,0:21:1.26:1,0,79	0/0:24,0:21:26.69:0,27,915	0/1:23,1:23:61.16:143,0,61	0/1:16,0:16:10.86:11,0,56	1/1:20,1:11:5.52:192,6,0	1/1:32,3:31:7.34:46,7,0	1/1:63,6:51:2.05:12,2,0	0/0:30,1:26:12.67:0,13,107	0/0:24,0:17:1.98:0,2,13	0/0:33,0:27:2:0,2,4	0/1:26,0:22:41.23:41,0,133	0/0:71,0:57:44.52:0,45,1787	1/1:11,1:11:9.70:128,10,0	0/1:16,0:16:6.70:7,0,317
chr10	102792890	.	C	CAGA	2443.56	PASS	AB=0.916;AC=15;AF=0.268;AN=56;BaseQRankSum=2.407;DP=979;FS=9.127;HRun=0;HaplotypeScore=296.1263;InbreedingCoeff=-0.1699;MQ=29.38;MQ0=171;MQRankSum=-4.044;QD=6.19;ReadPosRankSum=-0.509;VQSLOD=1.3380;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,3:21:75.10:193,0,75	0/0:22,0:14:10.65:0,11,77	0/0:65,0:2:5.38:0,5,63	0/0:76,0:3:2.60:0,3,10	0/0:36,0:29:24.02:0,24,412	0/1:20,3:18:35.63:36,0,62	0/1:43,2:37:99:503,0,155	0/1:44,0:23:57.79:58,0,455	0/1:20,9:26:67.72:275,0,68	0/0:56,0:39:47.16:0,47,1377	0/0:34,0:32:5.64:0,6,344	0/0:38,0:32:74.13:0,74,1106	0/1:22,2:20:9.55:421,0,10	0/1:23,4:24:43.11:364,0,43	0/1:16,3:18:90.30:159,0,90	0/0:20,0:16:35.38:0,35,754	0/1:26,1:23:82.03:229,0,82	1/1:10,3:11:11.86:163,12,0	0/0:35,0:7:14.42:0,14,135	0/1:26,0:22:15.02:15,0,58	0/0:67,0:44:8.58:0,9,112	0/0:28,0:21:12.20:0,12,125	0/0:23,0:17:3.93:0,4,21	0/1:34,1:25:3.66:20,0,4	0/1:31,0:25:52.07:62,0,52	0/0:68,0:50:99:0,107,1838	0/1:14,0:13:5.02:104,0,5	0/0:9,0:8:5.56:0,6,231
chr10	102792906	.	C	CCA	1477.90	PASS	AB=0.964;AC=24;AF=0.429;AN=56;BaseQRankSum=5.690;DP=992;FS=2.664;HRun=0;HaplotypeScore=258.3684;InbreedingCoeff=-0.2617;MQ=32.72;MQ0=166;MQRankSum=-6.481;QD=2.06;ReadPosRankSum=-4.135;VQSLOD=1.7058;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:25:38.68:39,0,302	0/0:12,0:8:2.84:0,3,38	0/1:76,0:3:10.98:11,0,13	0/1:100,0:4:0:0,0,0	0/0:32,0:26:28.12:0,28,381	0/1:26,0:21:32.53:33,0,239	0/0:53,0:46:7.45:0,7,567	0/1:36,7:26:99:371,0,103	0/1:31,0:29:23.31:23,0,317	0/0:46,0:32:47.13:0,47,620	0/0:23,0:21:7.95:0,8,182	0/0:35,0:31:71.20:0,71,847	0/1:25,0:22:42.62:43,0,399	0/1:25,0:23:42.32:42,0,300	0/1:19,0:18:26.13:26,0,184	0/0:24,0:21:45.14:0,45,569	0/1:26,0:23:99:106,0,302	0/1:17,1:16:13.76:14,0,327	0/1:29,0:14:99:127,0,111	1/1:21,3:18:0.18:84,0,0	0/1:72,17:63:6:362,0,6	1/1:30,0:25:0.99:7,1,0	0/1:20,0:19:14.95:15,0,18	0/1:46,0:39:36.89:37,0,383	0/1:25,0:21:1.22:1,0,107	0/0:49,0:36:61.39:0,61,788	1/1:10,7:15:0.51:280,1,0	1/1:5,0:4:0.84:5,1,0
chr10	102792927	.	CACGTG	C	346.91	PASS	AB=0.959;AC=10;AF=0.179;AN=56;BaseQRankSum=9.515;DP=989;FS=18.009;HRun=0;HaplotypeScore=247.3855;InbreedingCoeff=-0.0192;MQ=37.57;MQ0=81;MQRankSum=-6.194;QD=1.84;ReadPosRankSum=-4.700;VQSLOD=0.5561;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:31:46.74:0,47,1655	0/1:6,1:5:48.73:49,0,183	0/0:101,0:11:33.11:0,33,753	0/0:112,0:7:11.53:0,12,305	0/0:25,0:24:35.92:0,36,1127	0/0:21,0:19:36.14:0,36,801	0/0:41,0:38:75.14:0,75,2373	0/0:36,0:32:34.18:0,34,2004	0/0:32,0:29:51.11:0,51,1536	0/1:38,0:34:23.26:23,0,2292	0/1:18,0:17:33:33,0,535	0/0:28,0:28:69.19:0,69,2118	0/0:27,0:25:35.61:0,36,1792	0/0:23,0:23:41.60:0,42,1303	0/0:20,0:20:30.34:0,30,827	0/0:22,0:22:66.18:0,66,1866	0/0:28,0:27:39.50:0,40,1541	0/0:24,0:22:56.54:0,57,1336	0/1:23,0:20:5.40:5,0,1041	0/1:21,0:19:68.57:69,0,274	0/0:110,0:91:79.92:0,80,2123	0/1:32,3:34:1.72:2,0,498	0/1:19,2:20:42.08:42,0,102	0/0:54,0:50:47.35:0,47,2475	0/1:24,1:24:99:208,0,275	0/0:39,0:34:93.32:0,93,2865	0/0:21,0:21:54.09:0,54,1590	1/1:1,0:1:3.01:52,3,0
chr10	102792928	.	ACGTG	A	258.46	PASS	AB=0.966;AC=11;AF=0.196;AN=56;BaseQRankSum=10.123;DP=989;FS=16.864;HRun=0;HaplotypeScore=237.7797;InbreedingCoeff=-0.0855;MQ=38.13;MQ0=79;MQRankSum=-7.095;QD=1.22;ReadPosRankSum=-5.616;VQSLOD=0.1518;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:30:57.10:0,57,1532	0/1:6,0:4:2.45:2,0,156	0/0:99,0:11:32.13:0,32,563	0/0:112,0:7:11.41:0,11,238	0/0:25,0:23:35.86:0,36,932	0/1:21,0:19:42.61:43,0,610	0/0:40,0:37:74.85:0,75,2013	0/1:35,1:32:19.08:19,0,1631	0/0:32,0:30:37.10:0,37,1310	0/0:39,0:35:31.20:0,31,1921	0/0:18,0:17:6.66:0,7,464	0/0:28,0:28:62.18:0,62,1706	0/1:27,0:25:14.14:14,0,1445	0/0:22,0:22:4.01:0,4,1000	0/0:20,0:20:19.66:0,20,655	0/0:22,0:22:60.20:0,60,1492	0/1:29,0:28:28.56:29,0,1161	0/0:27,0:25:12.26:0,12,1170	0/1:21,2:20:99:108,0,833	0/1:18,4:20:54.36:54,0,288	0/0:105,0:91:81.96:0,82,1846	0/0:34,0:33:13.38:0,13,462	0/1:20,1:20:5.64:6,0,94	0/0:57,0:53:48.83:0,49,2230	0/1:26,0:25:99:108,0,229	0/0:38,0:33:93.31:0,93,2352	0/0:20,1:21:54.05:0,54,1305	1/1:1,0:1:2.84:14,3,0
chr10	102792929	.	CGTG	C	391.49	PASS	AB=0.871;AC=10;AF=0.179;AN=56;BaseQRankSum=9.799;DP=961;FS=12.901;HRun=0;HaplotypeScore=218.5142;InbreedingCoeff=-0.0317;MQ=38.68;MQ0=77;MQRankSum=-6.685;QD=2.15;ReadPosRankSum=-4.695;VQSLOD=0.4459;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:29:58.81:0,59,1438	0/1:5,1:4:48.73:49,0,135	0/0:100,0:11:33.11:0,33,625	0/0:113,0:7:11.53:0,12,247	0/0:21,3:23:35.92:0,36,841	0/0:18,1:18:13.72:0,14,619	0/0:39,0:36:77.80:0,78,1886	0/0:33,0:30:49.30:0,49,1665	0/0:27,2:29:33.31:0,33,1192	0/1:36,1:33:78.27:78,0,1717	0/1:15,1:16:32.82:33,0,405	0/0:28,0:28:66.09:0,66,1537	0/0:23,2:24:5.80:0,6,1378	0/0:19,1:21:14.79:0,15,954	0/0:18,2:20:11.28:0,11,635	0/0:21,0:21:60.20:0,60,1374	0/0:23,1:28:5.07:0,5,1189	0/0:24,0:24:58.64:0,59,1207	0/1:18,1:18:0.19:0,0,892	0/1:17,1:19:64.93:65,0,274	0/0:94,0:86:89.01:0,89,1935	0/1:28,4:33:1.06:1,0,420	0/1:16,3:19:48.85:49,0,70	0/0:54,1:54:17.05:0,17,2150	0/1:20,4:25:99:192,0,197	0/0:35,0:32:93.31:0,93,2196	0/0:20,0:21:54.01:0,54,1247	1/1:0,1:1:3.01:56,3,0
chr10	102792965	.	ACAC	A	302.73	PASS	AB=0.854;AC=4;AF=0.071;AN=56;BaseQRankSum=7.722;DP=1150;FS=71.981;HRun=0;HaplotypeScore=245.1568;InbreedingCoeff=-0.0829;MQ=47.00;MQ0=63;MQRankSum=-7.185;QD=2.73;ReadPosRankSum=-3.069;VQSLOD=-0.3656;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:41:99:0,105,2189	0/1:4,2:5:86.25:86,0,123	0/0:74,0:7:8.50:0,9,116	0/0:101,0:19:42.39:0,42,537	0/0:22,1:20:29.22:0,29,650	0/0:28,0:23:49.77:0,50,1006	0/0:47,0:46:99:0,120,2521	0/0:57,0:37:85.41:0,85,1885	0/0:32,0:29:65.56:0,66,1263	0/0:55,1:45:50.12:0,50,2172	0/1:26,2:24:14.11:14,0,528	0/0:34,0:32:87.28:0,87,1898	0/0:26,0:24:57.20:0,57,1274	0/0:29,0:27:33.92:0,34,1297	0/0:28,0:26:60.12:0,60,1192	0/0:26,0:24:63.22:0,63,1396	0/0:30,0:26:33.25:0,33,1014	0/0:37,0:36:96.69:0,97,2080	0/0:47,0:30:60.11:0,60,1270	0/0:28,0:25:19.52:0,20,652	0/0:120,0:109:99:0,162,3467	0/1:35,7:37:99:156,0,837	0/0:16,4:17:6.87:0,7,324	0/0:78,0:72:99:0,155,3298	0/1:30,5:30:99:154,0,468	0/0:39,0:32:84.29:0,84,1839	0/0:23,0:23:63.16:0,63,1328	0/0:9,0:7:18.05:0,18,364
chr10	102793017	.	G	GACAC	3180.07	PASS	AB=0.972;AC=9;AF=0.161;AN=56;BaseQRankSum=10.559;DP=945;FS=4.580;HRun=0;HaplotypeScore=216.8538;InbreedingCoeff=0.6546;MQ=46.88;MQ0=28;MQRankSum=3.155;QD=13.53;ReadPosRankSum=-2.174;VQSLOD=2.3627;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:47:90.10:0,90,1390	0/0:9,0:9:20.97:0,21,367	0/1:41,0:8:17.33:17,0,75	0/0:54,0:12:20.13:0,20,317	0/0:27,0:26:20.56:0,21,345	0/0:21,0:21:42.14:0,42,723	0/0:57,0:57:99:0,106,1673	0/1:36,0:25:54.61:317,0,55	0/0:32,0:31:60.10:0,60,944	0/0:38,0:34:72:0,72,1049	0/0:19,0:19:17.97:0,18,264	0/0:28,0:28:70.15:0,70,1222	0/0:26,0:26:60.11:0,60,951	0/0:34,0:34:57.42:0,57,1028	0/0:28,0:26:38.10:0,38,739	0/0:23,0:23:54.08:0,54,835	0/0:33,0:32:84.27:0,84,1439	0/0:50,0:49:99:0,107,1978	0/1:20,1:19:2.70:310,0,3	1/1:14,3:17:24.04:410,24,0	1/1:85,14:99:99:1813,131,0	0/0:37,0:36:51.09:0,51,888	0/0:16,0:15:24.08:0,24,419	0/0:59,0:58:99:0,113,1907	0/0:24,0:21:20.36:0,20,373	0/0:30,0:25:72.12:0,72,1194	1/1:10,4:14:23.56:470,24,0	0/0:11,0:11:33.11:0,33,583
chr10	102793023	.	CAG	C	1110.35	PASS	AB=0.972;AC=9;AF=0.161;AN=56;BaseQRankSum=7.386;DP=928;FS=5.717;HRun=0;HaplotypeScore=189.2176;InbreedingCoeff=0.5557;MQ=47.23;MQ0=31;MQRankSum=-0.477;QD=4.85;ReadPosRankSum=-6.164;VQSLOD=0.5658;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:45:82.10:0,82,1557	0/0:9,0:9:21.07:0,21,395	0/1:39,0:8:4.03:4,0,120	0/0:54,0:16:1.38:0,1,346	0/0:28,0:27:25.01:0,25,430	0/0:21,0:21:44.93:0,45,779	0/0:52,0:53:81.77:0,82,1740	0/1:30,3:21:99:150,0,123	0/0:32,0:31:66:0,66,1177	0/0:37,0:33:73.94:0,74,1235	0/0:18,0:18:18.06:0,18,347	0/0:26,0:26:70.47:0,70,1286	0/0:27,0:27:63.14:0,63,1066	0/0:33,0:33:60.31:0,60,1151	0/0:27,0:25:38.71:0,39,788	0/0:25,0:25:66.08:0,66,1040	0/0:33,0:32:67.59:0,68,1475	0/0:47,0:46:99:0,131,2054	1/1:22,1:19:3.52:232,4,0	1/1:16,0:15:18.15:155,18,0	1/1:99,3:99:60.86:661,61,0	0/0:33,0:32:50.79:0,51,926	0/0:20,0:19:30.05:0,30,499	0/0:59,0:58:99:0,106,2005	0/0:24,0:22:23.93:0,24,421	0/0:32,0:26:78.20:0,78,1254	0/1:16,0:16:7.87:54,0,8	0/0:11,0:11:33.10:0,33,597
chr10	102793954	.	GCACACA	G	2881.65	PASS	AB=0.890;AC=36;AF=0.692;AN=52;BaseQRankSum=7.966;DP=629;FS=16.048;HRun=0;HaplotypeScore=138.7075;InbreedingCoeff=0.5618;MQ=58.51;MQ0=9;MQRankSum=-7.065;QD=6.98;ReadPosRankSum=1.738;VQSLOD=1.4931;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,8:46:6.02:116,6,0	1/1:7,0:9:6.02:82,6,0	./.	./.	0/1:12,1:14:36.23:36,0,525	1/1:14,1:16:9.01:145,9,0	1/1:28,6:34:3.01:61,3,0	0/0:23,0:20:4.56:0,5,33	1/1:8,13:21:26.10:489,26,0	0/0:20,0:20:21.04:0,21,387	0/0:9,0:9:6.02:0,6,143	0/0:34,1:38:5.46:0,5,1198	1/1:16,5:21:18.53:345,19,0	1/1:12,10:27:29.81:462,30,0	1/1:7,9:19:12.01:162,12,0	0/0:24,0:25:36.12:0,36,1081	1/1:15,1:30:10.44:106,10,0	0/1:17,1:18:28.74:111,0,29	1/1:14,0:14:6.01:84,6,0	1/1:6,0:10:5.89:57,6,0	1/1:48,0:48:5.50:26,6,0	1/1:4,3:8:3.01:61,3,0	1/1:7,2:9:2.76:61,3,0	1/1:26,13:39:14.79:303,15,0	1/1:7,3:13:12:160,12,0	0/0:18,0:17:35.76:0,36,584	1/1:7,0:12:15.03:192,15,0	0/0:14,0:19:24.06:0,24,459
chr10	102794226	.	T	TC	11209.43	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=2.579;DP=728;FS=1.648;HRun=4;HaplotypeScore=99.7105;InbreedingCoeff=0.9986;MQ=84.09;MQ0=0;MQRankSum=-3.773;QD=33.87;ReadPosRankSum=3.558;VQSLOD=4.9182;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,32:39:84.28:1148,84,0	1/1:2,12:14:30.10:410,30,0	0/0:24,0:24:54.09:0,54,576	0/0:21,0:21:45.10:0,45,491	0/0:21,0:21:60.17:0,60,680	1/1:0,21:21:63.21:859,63,0	1/1:4,34:38:96.32:1306,96,0	0/0:29,0:29:75.21:0,75,850	1/1:0,35:36:99:1348,99,0	0/0:25,0:25:66.16:0,66,722	0/0:12,0:12:33.09:0,33,374	0/0:34,0:34:99:0,99,1120	1/1:2,21:23:56.95:779,57,0	1/1:2,20:22:59.96:813,60,0	1/1:1,16:17:48.16:657,48,0	0/0:21,0:21:60.17:0,60,679	0/0:46,0:46:99:0,132,1453	1/1:2,20:22:20.23:642,20,0	0/0:26,0:26:63.17:0,63,701	0/0:18,0:18:54.15:0,54,606	0/0:55,0:55:99:0,147,1586	1/1:0,18:18:48.16:655,48,0	1/1:1,11:12:20.43:255,20,0	1/1:4,39:42:99:1518,111,0	1/1:4,22:26:60.20:820,60,0	0/0:27,0:27:75.21:0,75,849	0/0:13,0:13:39.10:0,39,430	0/0:25,0:25:69.19:0,69,781
chr10	102794336	.	TAAGGCA	T	5405.38	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.388;DP=634;FS=35.641;HRun=0;HaplotypeScore=140.3382;InbreedingCoeff=0.9949;MQ=79.23;MQ0=0;MQRankSum=-11.672;QD=54.60;ReadPosRankSum=-3.413;VQSLOD=2.3858;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,4831	0/0:6,0:6:15.05:0,15,537	0/0:14,0:14:39.09:0,39,1037	0/0:20,0:20:57.16:0,57,1607	0/0:15,0:15:45.15:0,45,1664	0/0:18,0:18:54.19:0,54,1915	0/0:30,0:30:90.31:0,90,3379	1/1:0,26:26:72.20:1596,72,0	0/0:27,0:27:81.26:0,81,2940	0/0:24,0:24:72.24:0,72,2496	0/0:17,0:17:51.18:0,51,1829	0/0:40,0:40:99:0,120,4256	0/0:21,0:21:63.20:0,63,2188	0/0:22,0:22:66.23:0,66,2446	0/0:19,0:19:57.20:0,57,2127	0/0:23,0:23:69.24:0,69,2535	0/0:40,0:40:99:0,120,4352	0/0:26,0:26:78.27:0,78,2897	1/1:0,15:15:45.15:1128,45,0	1/1:0,18:18:39.13:998,39,0	1/1:0,22:21:21.07:533,21,0	0/0:19,0:19:54.19:0,54,1965	0/0:14,0:14:42.14:0,42,1580	0/0:38,0:38:99:0,111,4051	0/0:23,0:23:65.96:0,66,2330	0/0:27,0:27:81.28:0,81,3012	1/1:0,18:18:45.15:1150,45,0	0/0:8,0:8:24.08:0,24,903
chr10	102796125	.	CA	C	2269.01	PASS	AB=0.814;AC=39;AF=0.696;AN=56;BaseQRankSum=5.050;DP=515;FS=15.765;HRun=15;HaplotypeScore=63.9379;InbreedingCoeff=0.2436;MQ=71.67;MQ0=0;MQRankSum=-0.750;QD=5.16;ReadPosRankSum=4.625;VQSLOD=0.7770;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,27:37:18.37:349,18,0	1/1:2,4:7:10.87:64,11,0	0/1:11,0:9:6.61:7,0,41	0/0:14,2:17:18.01:0,18,166	0/1:6,0:6:3.23:3,0,76	1/1:4,9:14:5.04:136,5,0	0/1:5,9:14:23.12:124,0,23	1/1:11,1:28:32.92:105,33,0	1/1:6,9:15:5.67:38,6,0	0/0:24,1:27:38.13:0,38,354	0/1:10,1:11:0.40:0,0,107	0/0:5,0:15:2.84:0,3,14	1/1:7,7:14:11.63:77,12,0	0/1:13,8:21:29.12:59,0,29	0/1:14,10:25:3.13:95,0,3	0/1:9,3:12:26.54:27,0,41	1/1:11,19:31:36.45:235,36,0	1/1:9,15:26:30.47:184,30,0	1/1:5,0:17:19.52:55,20,0	1/1:8,0:14:11.45:34,11,0	1/1:6,2:26:31.62:114,32,0	1/1:4,10:14:2.83:130,3,0	0/1:7,5:13:29.97:79,0,30	1/1:9,21:30:44.02:288,44,0	1/1:6,10:18:26.78:164,27,0	0/1:16,2:18:5.59:6,0,193	1/1:3,0:17:22.51:66,23,0	0/0:8,1:14:1.59:0,2,113
chr10	102796252	.	CTGTGTG	C	327.64	PASS	AB=0.912;AC=16;AF=0.308;AN=52;BaseQRankSum=5.284;DP=582;FS=2.633;HRun=0;HaplotypeScore=119.6916;InbreedingCoeff=0.5253;MQ=63.55;MQ0=17;MQRankSum=-2.782;QD=2.20;ReadPosRankSum=1.214;VQSLOD=2.2453;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:15.05:0,15,386	0/0:6,0:6:6.02:0,6,142	./.	./.	0/1:11,2:14:12.98:14,0,13	0/0:13,0:12:9.03:0,9,269	0/0:32,0:31:18.86:0,19,346	0/0:23,0:23:1.55:0,2,4	0/0:16,0:15:18.06:0,18,479	0/0:21,0:23:4.17:0,4,34	1/1:6,0:9:0.87:2,1,0	1/1:17,0:22:4.34:28,4,0	0/0:16,0:15:15.05:0,15,350	0/0:17,0:17:17.83:0,18,262	0/0:16,0:22:15.05:0,15,348	1/1:6,1:11:7.79:112,8,0	1/1:30,0:33:13.60:146,14,0	0/0:25,0:23:29.72:0,30,657	0/0:20,0:20:0.89:0,1,2	1/1:9,4:13:3.01:60,3,0	0/0:45,10:54:2.71:0,3,20	0/0:14,0:15:14.96:0,15,412	0/0:19,0:19:12.02:0,12,192	0/0:24,0:24:34.34:0,34,869	0/0:13,0:14:15.05:0,15,351	1/1:19,0:17:2.13:4,2,0	1/1:18,1:20:6.76:80,7,0	0/1:7,0:7:12.51:30,0,13
chr10	102796828	.	A	AC	1333.16	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.982;DP=595;FS=2.244;HRun=3;HaplotypeScore=69.3991;InbreedingCoeff=0.9812;MQ=80.29;MQ0=0;MQRankSum=-3.662;QD=36.03;ReadPosRankSum=3.605;VQSLOD=4.3309;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:75.23:0,75,897	0/0:6,0:6:15.03:0,15,169	0/0:16,0:16:33.09:0,33,385	0/0:14,0:14:36.11:0,36,431	0/0:11,0:11:30.09:0,30,359	0/0:22,0:22:66.20:0,66,791	0/0:33,0:33:96.29:0,96,1150	0/0:24,0:24:60.17:0,60,701	0/0:14,0:14:42.13:0,42,504	0/0:17,0:17:45.14:0,45,540	0/0:14,0:14:36.11:0,36,432	0/0:24,0:24:66.20:0,66,789	0/0:21,0:21:60.18:0,60,720	0/0:26,0:26:75.23:0,75,898	0/0:18,0:18:48.15:0,48,576	0/0:20,0:20:60.16:0,60,697	1/1:2,35:37:99:1428,102,0	0/0:33,0:33:93.29:0,93,1115	0/0:26,0:26:69.20:0,69,819	0/0:16,0:16:42.11:0,42,488	0/0:51,0:51:99:0,144,1701	0/0:19,0:19:54.16:0,54,636	0/0:8,0:8:24.07:0,24,286	0/0:19,0:19:57.17:0,57,683	0/0:23,0:23:63.19:0,63,756	0/0:18,0:18:48.14:0,48,566	0/0:23,0:23:66.19:0,66,779	0/0:11,0:11:33.06:0,33,380
chr10	102797034	.	T	TG	1028.21	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.608;DP=656;FS=4.992;HRun=2;HaplotypeScore=72.2237;InbreedingCoeff=0.9977;MQ=83.08;MQ0=0;MQRankSum=-2.988;QD=32.13;ReadPosRankSum=1.206;VQSLOD=3.5112;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1385	0/0:10,0:10:27.08:0,27,334	0/0:17,0:17:45.14:0,45,550	0/0:22,0:22:47.33:0,47,537	0/0:23,0:23:69.19:0,69,831	0/0:23,0:22:63.20:0,63,781	0/0:34,0:34:93.23:0,93,1100	0/0:24,0:24:69.21:0,69,847	0/0:26,0:26:78.25:0,78,967	0/0:36,0:36:99:0,108,1299	0/0:14,0:13:39.08:0,39,466	0/0:28,0:28:81.21:0,81,973	0/0:14,0:14:39.11:0,39,470	0/0:26,0:26:78.21:0,78,929	0/0:21,0:21:63.17:0,63,756	0/0:21,0:21:63.19:0,63,768	1/1:1,31:32:78.26:1123,78,0	0/0:24,0:24:72.23:0,72,890	0/0:18,0:18:47.81:0,48,556	0/0:10,0:10:27:0,27,314	0/0:46,0:46:99:0,129,1577	0/0:22,0:22:63.18:0,63,766	0/0:14,0:14:39.11:0,39,470	0/0:32,0:32:93.28:0,93,1141	0/0:18,0:17:54.16:0,54,656	0/0:27,0:27:69.22:0,69,855	0/0:22,0:22:66.21:0,66,817	0/0:13,0:13:39.12:0,39,483
chr10	102801040	.	A	AAAAAAG	11728.11	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-1.966;DP=563;FS=5.010;HRun=0;HaplotypeScore=101.0844;InbreedingCoeff=0.9430;MQ=54.25;MQ0=7;MQRankSum=-10.073;QD=30.78;ReadPosRankSum=3.086;VQSLOD=4.2201;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,23:32:37.59:1071,38,0	1/1:1,8:10:18.05:581,18,0	0/0:8,0:6:10.92:0,11,106	0/0:10,0:7:15.17:0,15,102	0/0:36,0:36:86.70:0,87,1422	1/1:2,3:5:12:311,12,0	1/1:3,15:16:15.03:484,15,0	1/1:24,0:23:37.16:462,37,0	1/1:0,11:13:12.04:387,12,0	0/0:18,0:17:25:0,25,675	0/0:26,0:26:60.90:0,61,1182	0/0:24,0:24:66.05:0,66,1079	1/1:1,16:19:18.53:581,19,0	1/1:5,14:20:11.97:311,12,0	1/1:2,14:18:30.10:962,30,0	0/0:15,0:15:36.10:0,36,668	1/1:3,26:30:14.62:1246,15,0	1/1:8,17:25:16.61:598,17,0	1/1:28,1:26:64.76:767,65,0	1/1:23,0:23:54.19:877,54,0	1/1:13,0:12:21.07:415,21,0	1/1:2,21:25:9.40:926,9,0	1/1:4,12:17:16.51:384,17,0	1/1:2,13:17:12.01:310,12,0	1/1:4,25:30:29.11:876,29,0	0/0:29,0:28:44.14:0,44,884	1/1:10,0:9:9.02:179,9,0	0/0:16,0:16:45.03:0,45,651
chr10	102801041	.	A	AAAAAG	10015.14	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=1.153;DP=569;FS=2.293;HRun=0;HaplotypeScore=103.8837;InbreedingCoeff=0.6468;MQ=56.43;MQ0=7;MQRankSum=-10.001;QD=26.08;ReadPosRankSum=3.421;VQSLOD=4.5551;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:39.01:742,39,0	1/1:10,0:10:18.05:389,18,0	0/0:8,0:6:14.08:0,14,177	0/0:12,0:9:16.56:0,17,153	0/0:35,0:35:96.11:0,96,1481	1/1:5,0:5:1.37:184,1,0	0/1:18,0:16:2.55:306,0,3	1/1:5,18:27:56.65:811,57,0	1/1:13,0:13:12.04:259,12,0	0/0:19,0:18:48.51:0,49,728	0/0:26,0:26:64.11:0,64,1176	0/0:24,0:24:66.08:0,66,1086	1/1:20,0:20:17.50:388,18,0	1/1:18,0:18:2.50:185,2,0	1/1:17,0:17:30.10:643,30,0	0/0:15,0:15:39.10:0,39,661	1/1:30,0:30:0.30:816,0,0	0/1:25,0:25:34.59:363,0,35	1/1:4,26:27:79.40:1233,79,0	1/1:2,21:24:50.86:1273,51,0	1/1:2,10:13:21.07:562,21,0	0/1:24,0:23:18.40:587,0,18	1/1:18,0:17:9.97:250,10,0	1/1:17,0:17:3.01:182,3,0	1/1:31,0:30:6.82:587,7,0	0/0:30,0:29:69.69:0,70,1038	1/1:1,9:10:8.94:253,9,0	0/0:16,0:16:45.06:0,45,699
chr10	102801263	.	A	AGCACAC	6401.54	PASS	AB=0.808;AC=20;AF=0.357;AN=56;BaseQRankSum=10.324;DP=683;FS=16.086;HRun=0;HaplotypeScore=200.9782;InbreedingCoeff=-0.4000;MQ=59.70;MQ0=12;MQRankSum=-4.244;QD=12.83;ReadPosRankSum=-2.003;VQSLOD=2.7761;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:55,0:61:99:657,0,547	0/1:1,0:4:17.94:147,0,18	0/0:39,0:14:36.22:0,36,360	0/0:40,0:23:59.12:0,59,618	0/0:15,0:15:32.97:0,33,476	0/1:9,0:11:39.57:287,0,40	0/1:21,0:37:99:284,0,369	0/1:16,0:16:99:161,0,232	0/1:19,0:24:99:266,0,226	0/0:9,0:9:21.05:0,21,345	0/0:8,0:8:21.02:0,21,307	0/0:21,0:23:69.11:0,69,1020	0/1:20,0:37:99:369,0,162	0/1:22,0:30:99:474,0,186	0/1:23,0:28:99:570,0,128	0/0:22,0:23:66.11:0,66,1162	0/1:21,0:25:99:467,0,248	0/1:13,0:17:60.02:315,0,60	0/1:9,0:9:99:174,0,110	0/1:7,0:9:35.93:122,0,36	0/1:76,0:82:99:1053,0,316	0/1:17,0:22:99:191,0,138	0/1:6,0:12:40.77:41,0,58	0/1:20,1:44:99:294,0,194	0/1:12,0:16:99:105,0,163	0/0:17,0:20:33.43:0,33,628	1/1:12,0:14:22.36:424,22,0	0/0:7,0:7:21.04:0,21,383
chr10	102801347	.	G	GCATA	11364.39	PASS	AB=0.766;AC=36;AF=0.692;AN=52;BaseQRankSum=-9.230;DP=820;FS=17.281;HRun=0;HaplotypeScore=158.4233;InbreedingCoeff=0.6205;MQ=53.32;MQ0=11;MQRankSum=2.478;QD=18.51;ReadPosRankSum=2.193;VQSLOD=3.7955;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:21,28:50:23.50:1038,23,0	1/1:2,8:11:17.97:410,18,0	./.	./.	0/0:32,0:32:57.17:0,57,844	1/1:7,9:16:15.05:298,15,0	0/1:33,8:41:8.88:670,0,9	1/1:42,0:40:17.94:195,18,0	0/1:13,17:30:7.68:808,0,8	0/0:46,0:46:92.66:0,93,1340	0/0:15,0:15:21.07:0,21,328	1/1:10,18:28:36.12:850,36,0	1/1:33,1:37:34.60:421,35,0	1/1:16,16:32:30.10:695,30,0	1/1:13,14:27:33.58:779,34,0	0/0:17,0:18:36.12:0,36,537	1/1:14,22:37:33.58:780,34,0	1/1:10,11:22:19.31:428,19,0	1/1:17,6:22:18.06:423,18,0	1/1:7,14:22:15.05:346,15,0	1/1:30,47:80:17.13:1370,17,0	1/1:10,16:27:21.54:496,22,0	1/1:10,0:12:3.01:49,3,0	0/1:34,0:34:69.59:77,0,70	0/1:8,17:25:60.51:605,0,61	0/0:23,0:23:39.13:0,39,606	1/1:5,11:17:27.09:625,27,0	0/0:12,0:12:33.08:0,33,484
chr10	102801895	.	C	CCT	868.73	PASS	AB=0.983;AC=31;AF=0.674;AN=46;BaseQRankSum=1.081;DP=574;FS=23.386;HRun=0;HaplotypeScore=114.2439;InbreedingCoeff=0.3056;MQ=66.36;MQ0=14;MQRankSum=-1.257;QD=2.04;ReadPosRankSum=-1.801;VQSLOD=0.6355;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:22:1.18:1,0,17	1/1:6,0:5:3.01:33,3,0	./.	0/1:39,0:21:0:0,0,0	./.	0/0:15,0:15:0.24:0,0,8	1/1:27,1:27:9.84:74,10,0	1/1:36,0:36:14.41:90,14,0	1/1:18,0:18:7.49:40,7,0	0/1:14,0:13:0:0,0,0	./.	0/0:23,0:23:9.58:0,10,80	1/1:13,0:12:7.62:41,8,0	1/1:29,0:28:5.95:60,6,0	1/1:20,1:20:2.99:25,3,0	0/0:14,0:15:11.86:0,12,110	1/1:25,0:25:9.02:109,9,0	0/1:13,2:14:8.66:120,0,9	1/1:26,0:26:7.95:92,8,0	0/1:14,0:14:0:0,0,0	1/1:35,0:34:6:52,6,0	0/0:13,0:13:3:0,3,28	./.	1/1:23,1:24:17.10:158,17,0	./.	0/1:20,0:20:22.03:43,0,22	1/1:15,0:15:8.51:48,9,0	0/1:20,0:17:15.84:16,0,32
chr10	102801946	.	G	GTC	1638.64	PASS	AB=0.638;AC=25;AF=0.446;AN=56;BaseQRankSum=0.685;DP=484;FS=11.148;HRun=0;HaplotypeScore=78.8129;InbreedingCoeff=0.7676;MQ=58.73;MQ0=17;MQRankSum=1.432;QD=9.10;ReadPosRankSum=-0.072;VQSLOD=2.1519;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:26:52.23:0,52,655	1/1:1,2:3:3.01:49,3,0	0/0:36,0:13:15.57:0,16,209	0/0:62,0:17:13.26:0,13,171	0/0:12,0:11:18.06:0,18,221	1/1:6,9:15:8.21:105,8,0	1/1:6,12:16:9.03:147,9,0	0/0:25,0:25:54.15:0,54,644	1/1:6,10:17:2.99:49,3,0	0/0:13,0:14:35.72:0,36,386	0/0:10,0:10:18.03:0,18,206	0/0:17,0:17:27.06:0,27,332	1/1:4,7:10:6.49:99,6,0	1/1:4,10:14:12.01:181,12,0	1/1:6,12:17:9.03:147,9,0	0/0:17,0:16:27.08:0,27,328	1/1:5,9:14:12.04:196,12,0	1/1:4,5:9:3.01:49,3,0	0/0:14,0:14:32.77:0,33,379	0/0:6,0:5:12.04:0,12,148	0/0:22,0:21:51.11:0,51,614	1/1:5,8:13:6.33:94,6,0	1/1:1,9:10:15.05:245,15,0	0/1:13,16:28:5.89:386,0,6	1/1:1,6:7:5.85:94,6,0	0/0:16,0:15:24.05:0,24,295	0/0:12,0:11:20.86:0,21,238	0/0:10,0:8:9.03:0,9,111
chr10	102802152	.	C	CTG	136.66	PASS	AB=0.833;AC=6;AF=0.111;AN=54;BaseQRankSum=5.719;DP=567;FS=6.551;HRun=0;HaplotypeScore=130.8983;InbreedingCoeff=-0.1302;MQ=62.67;MQ0=20;MQRankSum=-5.520;QD=1.25;ReadPosRankSum=-3.158;VQSLOD=1.2599;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,5:24:9.03:0,9,125	0/1:13,1:14:34.64:35,0,277	0/0:28,0:16:34.80:0,35,424	0/0:47,0:27:47.63:0,48,548	0/0:15,0:15:45.15:0,45,688	0/0:15,5:16:3.74:0,4,215	0/0:26,13:36:54.58:0,55,790	0/0:24,0:22:53.72:0,54,750	0/0:20,2:21:17.88:0,18,217	0/0:16,0:13:39.12:0,39,572	0/0:11,0:11:21.06:0,21,298	0/0:14,0:14:30.10:0,30,458	0/1:14,2:14:20:20,0,341	0/1:13,6:14:3.68:4,0,125	0/1:24,6:30:24.47:24,0,329	0/0:22,0:22:50.99:0,51,757	0/1:12,3:15:30.86:31,0,271	0/1:10,5:15:99:141,0,259	0/0:15,0:13:35.31:0,35,470	0/0:22,0:21:45.15:0,45,688	0/0:17,0:17:36.11:0,36,528	0/0:17,6:22:15.05:0,15,227	0/0:15,2:16:17.84:0,18,253	0/0:19,1:19:15.03:0,15,207	0/0:13,6:17:18.06:0,18,275	0/0:27,0:27:81.28:0,81,1237	0/0:8,0:8:20.96:0,21,291	./.
chr10	102802174	.	CTG	C	241.88	PASS	AB=0.926;AC=7;AF=0.125;AN=56;BaseQRankSum=3.489;DP=516;FS=4.147;HRun=0;HaplotypeScore=129.2003;InbreedingCoeff=0.0670;MQ=40.46;MQ0=29;MQRankSum=-5.771;QD=3.61;ReadPosRankSum=-3.377;VQSLOD=1.8128;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:27:8.86:0,9,93	0/0:11,0:11:17.73:0,18,197	0/1:5,0:2:0.99:1,0,9	0/1:9,0:4:0.99:1,0,9	0/0:24,0:23:49.06:0,49,714	0/0:21,0:15:0.11:0,0,45	0/0:31,0:28:30.52:0,31,340	0/1:22,3:19:99:159,0,216	0/0:21,0:20:2.96:0,3,26	0/0:20,0:15:44.97:0,45,661	0/0:10,0:10:15.05:0,15,229	0/0:14,0:14:29.86:0,30,366	0/0:13,0:11:13.99:0,14,104	0/0:23,0:18:8.96:0,9,82	0/0:25,0:25:5.98:0,6,60	0/0:20,0:20:21.36:0,21,588	0/0:18,0:16:15.25:0,15,141	0/0:18,0:17:3.04:0,3,190	0/1:10,3:11:95.47:95,0,185	0/0:16,2:16:23.99:0,24,268	0/0:12,4:14:18.04:0,18,250	0/0:22,1:22:2.93:0,3,49	0/0:20,0:18:14.99:0,15,145	0/0:23,0:21:2.32:0,2,23	0/0:21,1:19:5.85:0,6,50	0/0:26,0:25:69.56:0,70,1059	0/1:11,1:12:33.12:33,0,99	1/1:3,0:3:5.99:65,6,0
chr10	102802185	.	TCACACACACACACACA	T	757.65	PASS	AB=0.835;AC=14;AF=0.318;AN=44;BaseQRankSum=5.651;DP=495;FS=1.432;HRun=0;HaplotypeScore=189.3221;InbreedingCoeff=0.3087;MQ=36.62;MQ0=34;MQRankSum=-4.660;QD=5.30;ReadPosRankSum=-1.166;VQSLOD=2.7037;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:10,0:10:0.47:1,0,0	./.	./.	0/0:23,0:22:24.08:0,24,1375	1/1:20,2:15:3.01:125,3,0	0/0:26,0:23:3.01:0,3,173	0/0:23,0:17:12.85:0,13,176	./.	0/0:21,0:15:29.58:0,30,1240	0/0:15,0:13:9.03:0,9,560	0/0:11,0:12:14.56:0,15,940	1/1:7,4:10:2.63:89,3,0	0/1:14,6:16:0:0,0,0	0/0:14,10:26:0.25:0,0,0	0/0:24,0:25:38.40:0,38,2511	0/1:15,0:14:15.14:63,0,15	1/1:17,1:18:10.08:462,10,0	0/1:13,0:13:73.85:74,0,86	0/0:13,0:11:5.98:0,6,60	0/0:18,0:15:2.30:0,2,50	./.	./.	0/0:20,0:21:1.29:0,1,3	1/1:16,0:16:0.47:1,0,0	0/0:26,0:25:42.14:0,42,2134	0/1:6,0:10:61.96:62,0,85	0/0:3,0:3:6.02:0,6,383
chr10	102802524	.	G	GACACAC	2634.17	PASS	AB=0.759;AC=33;AF=0.688;AN=48;BaseQRankSum=-0.476;DP=497;FS=2.118;HRun=0;HaplotypeScore=123.6914;InbreedingCoeff=0.5088;MQ=63.78;MQ0=14;MQRankSum=-3.732;QD=8.16;ReadPosRankSum=-3.732;VQSLOD=1.3683;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,4:24:3.95:0,4,62	1/1:6,0:6:9.01:108,9,0	./.	./.	0/0:8,0:10:17.27:0,17,272	1/1:15,3:19:8.83:174,9,0	1/1:12,1:17:2.53:37,3,0	1/1:20,0:20:6.90:86,7,0	1/1:17,0:20:3.01:38,3,0	0/0:13,0:14:5.85:0,6,45	0/0:8,0:10:13.70:0,14,257	0/0:17,0:24:1.77:0,2,4	1/1:6,1:11:6.02:134,6,0	1/1:19,2:27:5.65:133,6,0	1/1:12,3:21:8.16:211,8,0	0/0:15,0:16:23.80:0,24,429	0/1:15,0:20:42.49:329,0,42	1/1:12,0:20:5.23:85,5,0	1/1:11,1:12:12.04:323,12,0	./.	1/1:19,0:17:12.03:266,12,0	1/1:14,3:18:3.01:96,3,0	1/1:7,8:15:2.54:95,3,0	1/1:35,0:32:21.06:417,21,0	1/1:9,0:11:3.01:38,3,0	0/0:11,0:11:2.88:0,3,42	1/1:17,0:21:10.23:218,10,0	./.
chr10	102802679	.	G	GA	6841.80	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-7.634;DP=484;FS=0.780;HRun=7;HaplotypeScore=47.4168;InbreedingCoeff=0.9687;MQ=68.19;MQ0=0;MQRankSum=0.282;QD=28.16;ReadPosRankSum=3.242;VQSLOD=5.3099;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:75.23:899,75,0	1/1:0,12:12:24.07:290,24,0	0/0:9,0:7:11.80:0,12,113	0/0:8,0:6:3.17:0,3,39	0/0:33,0:33:96.11:0,96,910	1/1:0,19:19:45.14:542,45,0	1/1:2,7:9:18.06:217,18,0	0/0:21,0:21:54.08:0,54,521	1/1:3,13:16:22.64:418,23,0	0/0:15,0:15:39.06:0,39,376	0/0:15,0:15:38.40:0,38,346	0/0:13,0:13:39.06:0,39,376	1/1:0,10:10:24.07:290,24,0	1/1:1,19:20:57.17:684,57,0	1/1:4,16:20:45.14:544,45,0	0/0:20,0:20:57.09:0,57,550	1/1:3,26:28:69.21:830,69,0	1/1:0,15:15:45.14:542,45,0	0/0:24,0:24:54.06:0,54,514	0/0:19,0:18:39.04:0,39,371	0/0:13,0:13:27.01:0,27,249	1/1:2,11:13:30.09:362,30,0	1/1:5,17:22:45.14:539,45,0	1/1:3,12:15:27.08:322,27,0	1/1:1,12:13:30.09:362,30,0	0/0:24,0:24:57.06:0,57,543	0/0:21,0:21:54.08:0,54,520	0/0:6,0:6:18.03:0,18,173
chr10	102804394	.	A	AGTG	444.53	PASS	AB=0.923;AC=21;AF=0.583;AN=36;BaseQRankSum=-2.649;DP=320;FS=0.000;HRun=0;HaplotypeScore=41.4162;InbreedingCoeff=0.3289;MQ=53.98;MQ0=33;MQRankSum=0.129;QD=4.15;ReadPosRankSum=-0.231;VQSLOD=1.4140;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,1:9:3.01:57,3,0	1/1:4,0:4:5.98:70,6,0	./.	./.	./.	./.	1/1:19,0:18:3.48:45,3,0	./.	1/1:6,0:6:3.01:35,3,0	./.	0/0:5,0:5:3.01:0,3,38	0/0:8,0:8:8.88:0,9,75	1/1:8,3:10:3.01:57,3,0	1/1:5,2:7:3.01:57,3,0	1/1:3,0:3:3:26,3,0	0/0:9,0:7:3.01:0,3,39	1/1:13,3:16:3.01:57,3,0	0/1:11,1:12:32.77:51,0,33	./.	./.	0/0:32,0:32:2.97:0,3,21	./.	./.	1/1:7,1:8:3.01:57,3,0	1/1:6,4:8:3.01:57,3,0	0/0:18,0:10:15.05:0,15,194	0/0:6,0:5:2.98:0,3,21	0/0:8,0:8:3.01:0,3,39
chr10	102805929	.	T	TAC	3644.23	PASS	AB=0.798;AC=22;AF=0.407;AN=54;BaseQRankSum=-7.479;DP=791;FS=0.468;HRun=0;HaplotypeScore=122.0918;InbreedingCoeff=0.0909;MQ=59.97;MQ0=11;MQRankSum=0.389;QD=8.42;ReadPosRankSum=-1.519;VQSLOD=3.2354;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,7:26:0.17:378,0,0	1/1:5,8:12:15.05:217,15,0	./.	0/0:37,0:18:5.72:0,6,30	0/1:31,0:31:5.38:5,0,327	0/1:18,4:23:61.68:76,0,62	0/1:17,8:26:37.92:161,0,38	0/1:32,0:38:27.16:53,0,27	1/1:20,5:25:24.06:329,24,0	0/0:42,0:44:35.89:0,36,396	0/0:28,0:31:35.68:0,36,542	0/0:19,0:22:36.29:0,36,312	0/1:16,11:27:1.69:124,0,2	0/1:14,13:28:0.81:123,0,1	0/1:18,14:32:26.39:461,0,26	0/0:34,0:36:41.91:0,42,442	0/1:17,13:30:99:281,0,145	0/1:8,7:15:76.85:160,0,77	0/1:9,0:10:8.05:18,0,8	0/0:21,0:35:32.82:0,33,170	0/0:19,0:30:16.33:0,16,75	0/1:22,4:25:34.53:266,0,35	1/1:21,3:24:23.94:279,24,0	1/1:12,19:33:2.83:465,3,0	0/1:11,13:24:42.43:248,0,42	0/0:33,0:34:48.80:0,49,450	0/0:18,0:35:28.13:0,28,143	0/0:9,0:12:32.57:0,33,297
chr10	102810148	.	GC	G	3769.02	PASS	AB=0.726;AC=33;AF=0.589;AN=56;BaseQRankSum=0.933;DP=440;FS=18.240;HRun=11;HaplotypeScore=54.2148;InbreedingCoeff=0.3901;MQ=79.29;MQ0=0;MQRankSum=-0.829;QD=11.15;ReadPosRankSum=5.037;VQSLOD=1.0891;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,23:34:10.59:436,11,0	1/1:4,0:4:1.17:20,1,0	0/0:14,0:11:11.75:0,12,90	0/1:20,0:16:14.80:15,0,122	0/0:17,0:17:26.41:0,26,249	1/1:1,12:13:20.97:172,21,0	0/1:11,10:21:5.09:166,0,5	0/0:12,0:12:0:0,0,0	1/1:3,13:16:4.32:218,4,0	0/0:14,0:14:19.40:0,19,189	0/0:5,0:5:5.96:0,6,44	0/0:16,1:17:17.42:0,17,345	1/1:3,7:10:14.91:123,15,0	1/1:7,15:22:32.04:366,32,0	0/1:2,8:11:11.97:109,0,12	0/1:7,3:10:50.01:50,0,110	1/1:3,20:24:26.98:417,27,0	1/1:3,18:23:46.01:356,46,0	1/1:4,7:12:22.90:166,23,0	0/1:13,3:16:3.61:92,0,4	1/1:13,19:32:44.88:366,45,0	0/1:4,11:15:22.19:145,0,22	0/1:5,5:10:16.84:83,0,17	1/1:3,15:19:15.02:319,15,0	1/1:9,6:15:5.32:48,5,0	0/0:9,0:9:12.03:0,12,128	1/1:6,3:10:17.69:102,18,0	0/0:13,0:14:14.97:0,15,121
chr10	102811268	.	CT	C	17192.16	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=13.999;DP=688;FS=0.953;HRun=1;HaplotypeScore=90.8818;InbreedingCoeff=0.9990;MQ=86.27;MQ0=1;MQRankSum=-3.832;QD=37.21;ReadPosRankSum=2.551;VQSLOD=5.2984;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,50:50:99:1814,132,0	1/1:0,7:7:21.07:294,21,0	0/0:18,0:18:53.21:0,53,799	0/0:26,0:26:78.19:0,78,1174	0/0:18,0:18:51.11:0,51,744	1/1:0,26:26:75.25:1048,75,0	1/1:0,37:37:96.32:1338,96,0	1/1:0,15:15:45.07:585,45,0	1/1:0,21:21:51.17:706,51,0	0/0:24,0:24:69.23:0,69,1099	0/0:18,0:18:51.14:0,51,768	0/0:20,0:20:60.16:0,60,886	1/1:1,30:30:84.28:1169,84,0	1/1:0,28:28:75.25:1041,75,0	1/1:0,24:24:63.21:881,63,0	0/0:26,0:26:78.24:0,78,1202	0/0:41,0:41:99:0,123,1889	1/1:0,34:34:93.31:1296,93,0	1/1:0,21:21:63.17:831,63,0	1/1:0,11:11:33.11:461,33,0	1/1:1,41:42:99:1360,99,0	1/1:0,21:21:54.14:725,54,0	1/1:0,8:8:24.08:331,24,0	1/1:0,45:45:99:1720,123,0	1/1:0,21:21:57.19:797,57,0	0/0:24,0:24:72.24:0,72,1129	1/1:0,20:20:57.17:797,57,0	0/0:11,0:11:33.07:0,33,499
chr10	102812988	.	AC	A	11232.59	PASS	AB=0.931;AC=45;AF=0.804;AN=56;BaseQRankSum=-5.759;DP=594;FS=16.231;HRun=2;HaplotypeScore=96.0718;InbreedingCoeff=0.0400;MQ=60.12;MQ0=7;MQRankSum=-1.477;QD=19.64;ReadPosRankSum=-5.337;VQSLOD=2.5932;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:11,21:31:75.31:879,75,0	1/1:1,2:3:8.99:97,9,0	0/1:24,2:8:32.86:42,0,33	0/1:23,1:15:23.74:24,0,55	0/1:21,0:20:45.18:59,0,45	1/1:6,8:14:42:475,42,0	1/1:5,13:18:54.06:629,54,0	1/1:3,21:24:39.89:622,40,0	1/1:10,8:17:51.06:560,51,0	0/1:19,1:20:30.40:130,0,30	0/1:22,0:22:47.42:63,0,47	0/1:22,0:22:4.08:4,0,50	1/1:9,10:19:50.86:567,51,0	1/1:9,7:16:38.94:389,39,0	1/1:7,6:13:36.04:380,36,0	0/0:22,0:22:16.94:0,17,60	0/1:46,0:46:33.93:34,0,152	1/1:8,18:25:72.12:835,72,0	1/1:9,15:23:66.09:743,66,0	1/1:11,15:26:71.72:770,72,0	1/1:3,11:14:35.99:400,36,0	1/1:2,10:12:35.94:393,36,0	1/1:8,13:21:34.20:637,34,0	1/1:6,15:21:56.83:597,57,0	1/1:7,21:28:83.94:905,84,0	0/1:25,0:25:8.35:150,0,8	1/1:13,12:25:61.83:750,62,0	0/1:3,6:9:5.79:100,0,6
chr10	102813035	.	CA	C	7887.82	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=2.163;DP=682;FS=27.533;HRun=10;HaplotypeScore=103.3372;InbreedingCoeff=0.9761;MQ=61.63;MQ0=14;MQRankSum=1.784;QD=19.01;ReadPosRankSum=2.567;VQSLOD=3.7641;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,26:35:61.33:588,61,0	1/1:0,9:9:17.98:156,18,0	0/0:52,0:24:26.72:0,27,256	0/0:51,1:19:12.19:0,12,118	0/0:30,0:29:76.09:0,76,829	1/1:1,6:7:15:130,15,0	1/1:2,15:18:41.03:345,41,0	1/1:20,9:28:48.98:454,49,0	1/1:5,14:19:44.98:390,45,0	0/0:24,0:24:66.16:0,66,715	0/0:21,0:21:51.07:0,51,549	0/0:15,1:16:19.06:0,19,427	1/1:1,8:9:23.99:208,24,0	1/1:2,15:17:32.99:286,33,0	1/1:3,17:20:35.98:313,36,0	0/0:21,1:22:32.33:0,32,559	1/1:10,27:38:48.23:665,48,0	1/1:10,14:22:33.12:421,33,0	1/1:6,23:26:62.98:545,63,0	1/1:7,22:29:74.95:646,75,0	1/1:6,4:10:6.91:119,7,0	1/1:0,20:20:53.98:468,54,0	1/1:4,17:21:50.98:443,51,0	1/1:3,23:26:50.39:531,50,0	1/1:6,26:32:69.85:661,70,0	0/0:27,0:27:69.18:0,69,760	1/1:1,21:22:59.98:519,60,0	0/0:20,0:20:48.11:0,48,521
chr10	102813890	.	T	TG	8098.21	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-3.510;DP=537;FS=0.868;HRun=0;HaplotypeScore=191.8665;InbreedingCoeff=0.9104;MQ=68.13;MQ0=0;MQRankSum=-2.256;QD=19.85;ReadPosRankSum=5.690;VQSLOD=4.9961;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,20:42:85.18:794,85,0	1/1:5,4:9:15.30:145,15,0	0/0:14,0:14:27.57:0,28,195	0/0:17,0:17:21.62:0,22,198	0/0:19,0:19:28.91:0,29,139	1/1:4,8:12:25.90:215,26,0	1/1:3,23:26:61.52:397,62,0	1/1:1,20:21:62.61:464,63,0	1/1:15,11:26:65.24:603,65,0	0/0:16,0:16:21.26:0,21,87	0/0:11,0:11:17.19:0,17,68	0/0:28,0:28:30.45:0,30,179	1/1:3,7:10:29.30:199,29,0	1/1:16,7:23:56.13:586,56,0	1/1:20,6:26:60.60:712,61,0	0/1:18,0:18:0.86:1,0,121	1/1:13,3:16:47.76:487,48,0	1/1:18,13:31:53.31:619,53,0	1/1:5,13:18:47.95:473,48,0	1/1:5,6:11:19.47:200,19,0	1/1:16,12:28:12.92:187,13,0	1/1:10,7:17:36.45:342,36,0	1/1:2,7:9:13.28:112,13,0	1/1:20,6:26:62.64:693,63,0	1/1:9,8:17:28.91:358,29,0	0/0:22,0:22:25.46:0,25,85	1/1:11,11:22:62.06:512,62,0	0/0:2,0:2:1.72:0,2,4
chr10	102817607	.	GGGA	G	381.33	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.032;DP=571;FS=0.000;HRun=0;HaplotypeScore=79.9066;InbreedingCoeff=0.9814;MQ=83.73;MQ0=0;MQRankSum=-1.926;QD=29.33;ReadPosRankSum=2.492;VQSLOD=3.3255;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:66.23:0,66,1439	0/0:9,0:9:24.08:0,24,509	0/0:16,0:16:39.02:0,39,704	0/0:23,0:23:51.17:0,51,884	0/0:19,0:19:51.17:0,51,1082	0/0:15,0:15:45.14:0,45,924	0/0:24,0:24:57.20:0,57,1226	0/0:28,0:28:78.26:0,78,1659	0/0:22,0:22:57.20:0,57,1229	0/0:28,0:28:72.25:0,72,1550	0/0:21,0:21:60.21:0,60,1275	0/0:25,0:25:63.22:0,63,1327	0/0:25,0:25:69.24:0,69,1496	0/0:23,0:23:60.21:0,60,1309	0/0:19,0:19:51.17:0,51,1115	0/0:23,0:23:66.20:0,66,1386	1/1:1,12:13:30.10:476,30,0	0/0:13,1:14:33.11:0,33,714	0/0:17,0:17:45.15:0,45,969	0/0:17,0:17:45.15:0,45,971	0/0:23,0:23:63.22:0,63,1354	0/0:20,0:20:54.19:0,54,1157	0/0:26,0:26:60.19:0,60,1244	0/0:36,0:36:99:0,99,2005	0/0:17,0:17:45.15:0,45,984	0/0:12,0:11:33.11:0,33,721	0/0:23,0:23:63.22:0,63,1339	0/0:5,0:5:15.05:0,15,328
chr10	102817781	.	GCA	G	1218.25	PASS	AB=0.985;AC=34;AF=0.654;AN=52;BaseQRankSum=-1.140;DP=404;FS=7.835;HRun=0;HaplotypeScore=75.2787;InbreedingCoeff=0.2768;MQ=55.70;MQ0=17;MQRankSum=-0.096;QD=3.99;ReadPosRankSum=1.612;VQSLOD=1.3654;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:0.94:0,1,2	0/1:10,0:10:0:0,0,0	./.	./.	1/1:14,1:14:13.64:212,14,0	0/1:13,0:12:0:0,0,0	0/1:15,0:15:0:0,0,0	0/0:10,0:10:2.91:0,3,20	1/1:19,0:18:0.50:2,0,0	1/1:19,1:19:29.35:267,29,0	0/1:9,1:10:25.14:55,0,25	1/1:17,0:16:23.63:213,24,0	1/1:11,0:11:3.26:14,3,0	1/1:15,0:14:2.84:14,3,0	0/0:12,0:12:0.47:0,0,1	1/1:15,1:14:9.36:83,9,0	1/1:11,1:12:5.27:46,5,0	0/1:10,0:10:4:19,0,4	0/0:10,0:10:2.37:0,2,8	1/1:13,0:13:5.44:23,5,0	0/0:16,0:13:0.47:0,0,1	0/1:17,0:16:21.43:21,0,33	1/1:12,0:12:1.55:4,2,0	1/1:28,0:27:0.89:2,1,0	1/1:22,0:22:2.84:14,3,0	1/1:17,2:17:13.87:243,14,0	0/0:10,0:10:1.55:0,2,4	1/1:9,1:8:9.02:98,9,0
chr10	102817788	.	CACACACACACACACACACACACACAT	C	1669.93	PASS	AB=0.992;AC=26;AF=0.481;AN=54;BaseQRankSum=-3.024;DP=408;FS=16.070;HRun=0;HaplotypeScore=218.7248;InbreedingCoeff=-0.0279;MQ=49.51;MQ0=22;MQRankSum=1.331;QD=5.92;ReadPosRankSum=1.116;VQSLOD=1.2241;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:30.04:30,0,47	0/0:7,0:7:6.28:0,6,41	./.	0/1:12,0:7:0:0,0,0	0/0:18,0:17:3.23:0,3,1722	0/1:11,0:11:17.96:19,0,18	0/1:15,0:15:56.86:57,0,231	0/1:12,0:10:45.03:60,0,45	0/1:17,0:16:6.16:6,0,95	0/1:21,0:20:27.54:28,0,1274	0/0:14,0:12:8.40:0,8,765	0/0:22,0:21:26.65:0,27,1825	1/1:12,0:12:0.10:231,0,0	1/1:17,0:16:3.01:144,3,0	0/0:12,0:12:6:0,6,72	0/1:18,0:16:39.64:40,0,636	0/0:14,0:13:24.08:0,24,1404	0/1:12,0:10:72.85:273,0,73	1/1:8,0:8:5.68:37,6,0	1/1:2,10:12:5.10:399,5,0	1/1:17,0:13:5.63:46,6,0	1/1:15,0:14:5.54:265,6,0	0/1:11,0:11:12.74:18,0,13	0/1:26,0:25:8.69:76,0,9	1/1:23,0:23:3.01:65,3,0	0/0:20,0:18:35.95:0,36,2269	0/1:8,1:9:10.69:35,0,11	0/0:10,0:8:12.04:0,12,891
chr10	102817790	.	CACACACACACACACACACACACAT	C	2311.08	PASS	AB=0.991;AC=34;AF=0.630;AN=54;BaseQRankSum=-3.339;DP=392;FS=34.506;HRun=0;HaplotypeScore=194.2165;InbreedingCoeff=0.2285;MQ=48.85;MQ0=22;MQRankSum=2.861;QD=7.76;ReadPosRankSum=4.284;VQSLOD=1.4926;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:13:11.96:93,12,0	1/1:6,1:7:7.54:52,8,0	./.	0/1:12,0:7:0:0,0,0	0/1:18,0:17:17.29:17,0,1488	1/1:10,0:10:2.65:24,3,0	0/1:15,0:15:56.87:57,0,170	0/1:11,0:9:41.76:60,0,42	0/1:15,0:14:4.23:74,0,4	0/1:20,0:19:30.23:30,0,1059	0/0:15,0:12:1.59:0,2,642	0/0:21,0:20:26.39:0,26,1545	1/1:11,1:12:19.24:346,19,0	1/1:15,1:15:3.01:189,3,0	0/0:9,1:10:2.83:0,3,20	0/1:17,0:15:40:40,0,567	0/0:14,0:13:24.08:0,24,1191	0/1:12,1:11:64.95:347,0,65	1/1:8,0:8:5.68:37,6,0	1/1:12,0:12:5.10:333,5,0	1/1:17,0:13:8.97:71,9,0	1/1:13,1:13:23.04:347,23,0	1/1:11,0:11:8.98:72,9,0	1/1:25,0:24:17.90:136,18,0	1/1:22,1:23:3.01:91,3,0	0/0:19,0:17:35.95:0,36,2010	1/1:9,0:9:9.39:64,9,0	0/0:8,0:6:12.04:0,12,776
chr10	102817792	.	CACACACACACACACACACACAT	C	2583.51	PASS	AB=0.990;AC=37;AF=0.685;AN=54;BaseQRankSum=-4.029;DP=388;FS=37.214;HRun=0;HaplotypeScore=178.6347;InbreedingCoeff=0.2565;MQ=48.64;MQ0=23;MQRankSum=2.805;QD=8.47;ReadPosRankSum=5.106;VQSLOD=1.2882;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,1:13:14.97:138,15,0	1/1:7,0:7:9.47:97,9,0	./.	0/1:11,0:6:0:0,0,0	0/1:18,0:17:17.30:17,0,1290	1/1:9,0:9:5.99:49,6,0	0/1:15,0:15:56.89:57,0,123	0/1:11,0:9:24.98:61,0,25	1/1:15,0:14:17.87:131,18,0	0/1:21,0:20:41.53:42,0,1016	0/0:15,0:12:1.59:0,2,560	0/0:21,0:20:5.66:0,6,1295	1/1:11,1:12:19.55:359,20,0	1/1:7,9:15:3.01:156,3,0	1/1:8,0:8:5.92:41,6,0	0/1:17,0:15:40:40,0,472	0/0:14,0:13:24.08:0,24,1045	0/1:12,1:11:37.19:403,0,37	1/1:8,0:8:5.68:37,6,0	1/1:12,0:12:5.23:305,5,0	1/1:17,0:12:8.97:71,9,0	1/1:14,0:13:23.21:314,23,0	1/1:11,0:11:9.45:72,9,0	1/1:24,1:24:17.97:180,18,0	1/1:5,18:23:3.01:117,3,0	0/0:19,0:17:35.85:0,36,1717	1/1:9,0:9:9.80:65,10,0	0/0:8,0:6:12.04:0,12,677
chr10	102817876	.	C	CAA	3700.95	PASS	AB=0.882;AC=40;AF=0.714;AN=56;BaseQRankSum=4.116;DP=535;FS=6.331;HRun=15;HaplotypeScore=124.7421;InbreedingCoeff=0.6593;MQ=64.30;MQ0=1;MQRankSum=-3.235;QD=9.09;ReadPosRankSum=-5.041;VQSLOD=0.2242;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:6,3:18:14.98:128,15,0	1/1:6,0:8:17.92:142,18,0	0/1:16,0:13:12.03:12,0,35	0/1:16,0:13:13.04:13,0,33	0/1:13,0:14:4.54:5,0,89	1/1:6,3:22:10.21:86,10,0	1/1:7,12:22:25.19:241,25,0	1/1:19,0:19:16.10:129,16,0	1/1:6,10:18:20.64:182,21,0	0/0:20,0:21:13.69:0,14,106	0/0:19,0:23:18.64:0,19,183	0/0:22,0:26:23.62:0,24,168	1/1:6,0:17:16.01:107,16,0	1/1:14,0:15:17.98:162,18,0	1/1:6,14:23:15.64:144,16,0	0/0:29,0:29:36.96:0,37,278	1/1:5,11:19:12.03:132,12,0	1/1:3,8:12:8.99:95,9,0	1/1:15,0:17:27.01:249,27,0	1/1:32,0:32:44.09:406,44,0	1/1:8,0:8:14.95:124,15,0	1/1:13,0:24:19.87:279,20,0	0/1:2,5:20:5.94:152,0,6	1/1:12,11:23:18.52:219,19,0	1/1:21,3:26:50.43:495,50,0	0/0:16,0:18:25.17:0,25,172	1/1:16,0:15:20.71:198,21,0	0/0:8,0:10:20.35:0,20,142
chr10	102819316	.	T	TATAC	4453.67	PASS	AB=0.998;AC=26;AF=0.481;AN=54;BaseQRankSum=5.375;DP=758;FS=1.368;HRun=0;HaplotypeScore=141.9110;InbreedingCoeff=0.1302;MQ=65.31;MQ0=2;MQRankSum=0.193;QD=8.11;ReadPosRankSum=-5.170;VQSLOD=2.2070;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:49,1:50:54.49:93,0,54	0/1:11,0:11:12.07:12,0,12	./.	0/0:21,0:15:2.99:0,3,23	0/0:24,0:24:42.06:0,42,538	0/1:13,0:13:7.74:8,0,13	0/1:29,0:29:7.62:8,0,14	1/1:38,0:37:29.76:215,30,0	0/1:36,0:36:10.37:10,0,66	0/0:26,0:26:42.13:0,42,616	0/0:31,0:32:45.06:0,45,563	0/0:25,0:25:45.11:0,45,654	0/1:26,0:26:3.87:4,0,58	0/1:27,0:27:20.84:25,0,21	0/1:31,0:31:15.02:15,0,109	0/0:21,0:21:39.11:0,39,563	1/1:20,0:20:1.82:5,2,0	0/1:22,0:22:12.03:13,0,12	1/1:22,11:34:36.07:684,36,0	1/1:7,13:21:33.11:778,33,0	1/1:22,30:55:78.27:1776,78,0	0/1:21,0:21:9.66:13,0,10	1/1:32,0:32:6.80:56,7,0	0/1:31,0:31:21.67:22,0,22	0/1:27,0:27:14.08:14,0,95	0/0:33,0:33:57.17:0,57,814	1/1:11,13:25:30.10:704,30,0	0/0:10,0:11:27.02:0,27,331
chr10	102819354	.	T	TAC	7126.17	PASS	AB=0.837;AC=30;AF=0.536;AN=56;BaseQRankSum=-5.714;DP=755;FS=4.839;HRun=0;HaplotypeScore=85.6447;InbreedingCoeff=0.4465;MQ=59.04;MQ0=24;MQRankSum=-0.048;QD=14.03;ReadPosRankSum=8.697;VQSLOD=3.6135;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,33:45:32.41:996,32,0	1/1:2,11:11:18.06:297,18,0	0/1:32,0:15:1.50:1,0,437	0/0:30,0:13:22.78:0,23,273	0/0:32,0:32:78.23:0,78,960	1/1:2,13:13:18.06:297,18,0	1/1:9,14:17:15.05:248,15,0	0/0:45,0:45:99:0,99,1224	0/1:6,22:25:4.37:462,0,4	0/0:28,0:28:75.23:0,75,928	0/0:26,0:26:57.16:0,57,698	0/0:20,0:20:57.18:0,57,712	1/1:7,21:25:23.26:394,23,0	1/1:7,21:24:39.85:690,40,0	1/1:8,26:27:10.64:705,11,0	0/0:24,0:24:66.20:0,66,812	1/1:5,0:30:1.82:5,2,0	0/1:7,20:23:15.69:276,0,16	0/1:26,0:26:35.79:36,0,438	0/1:25,0:25:80.70:81,0,314	0/1:42,0:41:99:232,0,126	1/1:2,12:14:27.09:440,27,0	1/1:4,20:23:57.19:923,57,0	1/1:4,16:20:39.13:644,39,0	0/1:5,19:23:13.44:323,0,13	0/0:27,0:29:59.84:0,60,878	0/1:23,0:23:77.61:78,0,199	0/0:12,0:12:27.04:0,27,296
chr10	102820311	.	GCT	G	11293.89	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=4.355;DP=683;FS=4.884;HRun=0;HaplotypeScore=104.1926;InbreedingCoeff=0.9818;MQ=87.66;MQ0=17;MQRankSum=-3.643;QD=25.84;ReadPosRankSum=3.710;VQSLOD=5.5829;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,29:37:75.23:917,75,0	1/1:3,7:9:15.05:183,15,0	0/0:62,0:40:18.67:0,19,518	0/0:77,0:49:32.67:0,33,600	0/0:9,0:9:20.98:0,21,284	1/1:2,19:21:48.15:587,48,0	1/1:4,18:22:48.15:587,48,0	1/1:7,20:27:60.15:697,60,0	1/1:5,23:27:63.20:770,63,0	0/0:19,0:19:39.13:0,39,632	0/0:9,0:9:21.07:0,21,339	0/0:20,0:20:45.15:0,45,719	1/1:5,16:21:38.91:476,39,0	1/1:2,14:15:36.09:440,36,0	1/1:5,19:24:54.17:660,54,0	0/0:19,0:19:54.18:0,54,871	1/1:3,31:34:90.28:1100,90,0	1/1:2,26:28:72.06:857,72,0	1/1:6,9:15:27.07:317,27,0	1/1:2,9:11:15.05:183,15,0	1/1:9,45:55:99:1283,105,0	1/1:4,11:14:30.09:367,30,0	1/1:4,4:8:9.03:110,9,0	1/1:6,33:39:87.27:1063,87,0	1/1:2,9:11:27.08:330,27,0	0/0:19,0:19:45.15:0,45,720	1/1:0,13:13:30.04:367,30,0	0/0:7,0:7:17.98:0,18,211
chr10	102820661	.	G	GAC	3526.20	PASS	AB=0.847;AC=23;AF=0.442;AN=52;BaseQRankSum=-3.985;DP=675;FS=4.786;HRun=0;HaplotypeScore=99.6889;InbreedingCoeff=-0.2833;MQ=70.90;MQ0=8;MQRankSum=-1.625;QD=6.98;ReadPosRankSum=0.879;VQSLOD=2.7466;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:30,4:34:56.61:240,0,57	0/1:5,0:5:34.79:35,0,47	./.	./.	0/0:9,0:8:12.03:0,12,131	1/1:20,12:33:6.94:242,7,0	0/1:22,12:36:99:313,0,114	1/1:32,0:32:3.01:32,3,0	0/1:15,11:26:9.09:283,0,9	0/1:17,0:17:5.69:6,0,183	0/0:2,0:4:5.85:0,6,47	0/0:16,0:17:26.89:0,27,266	0/1:14,10:24:62.41:210,0,62	0/1:14,8:22:17.69:164,0,18	1/1:9,19:29:6.38:486,6,0	0/0:38,1:40:12.17:0,12,483	0/0:18,0:20:26.98:0,27,304	0/1:27,4:31:79.30:221,0,79	0/0:19,0:19:2.34:0,2,8	0/1:15,0:15:59.33:64,0,59	0/1:42,1:43:16.34:242,0,16	0/1:16,7:24:18.15:164,0,18	1/1:8,9:16:0.94:82,1,0	0/1:24,22:47:64.76:467,0,65	0/1:7,6:14:17.69:162,0,18	0/1:21,0:22:21.68:22,0,101	0/1:30,0:30:91.75:92,0,157	0/0:12,0:10:18.03:0,18,187
chr10	102820701	.	C	CAA	2364.62	PASS	AB=0.964;AC=20;AF=0.357;AN=56;BaseQRankSum=3.791;DP=771;FS=4.423;HRun=3;HaplotypeScore=116.4468;InbreedingCoeff=0.0420;MQ=67.56;MQ0=9;MQRankSum=0.692;QD=4.93;ReadPosRankSum=-0.622;VQSLOD=-0.2478;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:39:18.02:18,0,496	0/0:9,0:9:5.62:0,6,189	0/0:30,0:19:47.98:0,48,509	0/0:36,0:27:70.61:0,71,683	0/0:15,0:14:38.99:0,39,387	0/1:27,0:26:72.99:73,0,154	0/1:35,0:35:88.41:88,0,408	1/1:25,0:25:62.95:559,63,0	0/1:25,0:25:95.18:95,0,239	0/0:31,0:31:71.98:0,72,731	0/0:12,0:12:29.96:0,30,261	0/0:22,0:22:63:0,63,644	0/1:29,0:29:40.34:40,0,422	0/1:24,0:24:34.80:35,0,286	0/1:35,0:35:99:144,0,346	0/0:37,0:37:86.16:0,86,1079	0/0:33,0:33:86.87:0,87,844	0/1:31,0:30:28.25:28,0,460	1/1:13,0:13:38.99:348,39,0	1/1:2,11:13:25.92:303,26,0	1/1:7,38:51:27.07:442,27,0	0/1:26,0:26:36.29:36,0,293	0/0:24,0:23:5.31:0,5,270	0/1:54,0:54:99:127,0,540	0/1:21,0:21:28.62:29,0,267	0/0:24,0:24:66:0,66,622	0/1:8,24:32:31.44:182,0,31	0/0:18,0:16:32.96:0,33,361
chr10	102821799	.	TACACACACACACACACACTCACACACAC	T	9191.57	PASS	AB=0.935;AC=31;AF=0.554;AN=56;BaseQRankSum=6.686;DP=525;FS=0.000;HRun=0;HaplotypeScore=270.6555;InbreedingCoeff=0.3613;MQ=67.83;MQ0=5;MQRankSum=-6.954;QD=25.75;ReadPosRankSum=3.385;VQSLOD=3.2339;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,26:39:12.04:870,12,0	1/1:5,8:13:6.02:435,6,0	0/0:33,0:21:7.64:0,8,475	0/1:34,0:26:22.19:22,0,740	0/0:24,0:24:38.77:0,39,2944	1/1:1,16:19:18.06:1264,18,0	0/1:4,11:15:99:212,0,322	0/1:17,0:17:50.58:51,0,1462	1/1:3,10:13:3.01:218,3,0	0/0:23,0:22:60.21:0,60,5879	0/0:11,0:11:21.05:0,21,2091	0/0:11,0:11:30.10:0,30,3452	1/1:4,11:15:12.04:735,12,0	1/1:2,12:15:12.04:850,12,0	1/1:4,11:15:9.03:653,9,0	0/1:31,1:32:99:146,0,6696	0/0:17,0:17:6.60:0,7,2400	1/1:2,9:11:6.02:435,6,0	0/1:9,0:9:13.89:14,0,663	0/1:20,0:20:27.76:28,0,1535	0/1:23,0:22:78.84:79,0,1796	1/1:2,11:14:9.03:632,9,0	1/1:2,11:13:11.74:850,12,0	1/1:3,14:17:6.02:435,6,0	1/1:4,16:22:18.06:1264,18,0	0/0:24,0:24:42.12:0,42,3584	0/0:15,0:15:8.63:0,9,2020	0/0:10,0:9:12:0,12,1136
chr10	102821818	.	TCA	T	528.62	PASS	AB=0.996;AC=35;AF=0.625;AN=56;BaseQRankSum=8.361;DP=497;FS=12.715;HRun=0;HaplotypeScore=108.4466;InbreedingCoeff=0.2051;MQ=51.76;MQ0=14;MQRankSum=-6.087;QD=1.40;ReadPosRankSum=2.514;VQSLOD=1.2101;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:28:12.25:58,12,0	1/1:8,0:8:5.68:28,6,0	0/0:20,0:7:2.04:0,2,6	0/0:27,0:18:0.47:0,0,1	0/0:16,10:26:9.03:0,9,126	1/1:18,0:18:17.04:84,17,0	0/1:12,0:12:8.10:8,0,15	0/0:20,0:19:0.88:0,1,2	1/1:10,0:10:2.84:14,3,0	0/1:28,0:27:24.56:25,0,309	0/1:9,0:9:10.24:10,0,167	0/0:18,0:18:27.72:0,28,390	1/1:14,0:12:8.52:42,9,0	1/1:13,0:13:11.36:56,11,0	1/1:11,0:11:8.52:42,9,0	0/1:30,0:30:39.22:39,0,493	0/1:22,0:22:23.53:24,0,69	1/1:9,0:9:5.68:28,6,0	0/1:9,0:9:1.65:2,0,14	0/1:19,0:19:5.16:22,0,5	0/1:31,0:29:2:2,0,20	1/1:14,0:12:8.52:42,9,0	1/1:11,0:11:8.99:43,9,0	1/1:14,0:14:5.68:28,6,0	1/1:19,0:18:17.04:84,17,0	0/1:27,0:27:5.12:5,0,410	1/1:19,0:18:1.54:5,2,0	0/0:9,0:8:14.97:0,15,172
chr10	102826397	.	T	TGACA	919.08	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.549;DP=699;FS=0.000;HRun=0;HaplotypeScore=109.1554;InbreedingCoeff=0.9395;MQ=67.64;MQ0=0;MQRankSum=-0.941;QD=38.29;ReadPosRankSum=-1.087;VQSLOD=3.0487;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:60.12:0,60,962	0/0:15,0:15:33.10:0,33,518	0/0:22,0:21:28.02:0,28,387	0/0:12,0:12:8.76:0,9,111	0/0:26,0:26:60.17:0,60,944	0/0:17,0:17:45.09:0,45,690	0/0:21,0:21:33.10:0,33,518	0/0:29,0:28:45.13:0,45,655	0/0:34,0:34:69.24:0,69,1144	0/0:41,0:41:90.29:0,90,1417	0/0:14,0:14:27.09:0,27,441	0/0:23,0:23:54.17:0,54,853	0/0:29,0:29:69.24:0,69,1141	0/0:24,0:24:60.20:0,60,987	0/0:35,0:35:81.25:0,81,1294	0/0:25,0:25:69.21:0,69,1086	1/1:5,19:24:42.14:1014,42,0	0/0:18,0:18:38.62:0,39,562	0/0:16,0:15:30.09:0,30,472	0/0:40,0:40:81.24:0,81,1314	0/0:28,0:28:66.23:0,66,1094	0/0:17,0:17:36.12:0,36,593	0/0:29,0:29:57.18:0,57,919	0/0:33,0:33:72.25:0,72,1187	0/0:17,0:17:45.13:0,45,698	0/0:26,0:26:57.16:0,57,919	0/0:31,0:31:63.22:0,63,1045	0/0:21,0:21:63.22:0,63,1045
chr10	102828431	.	T	TA	10394.12	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-14.459;DP=575;FS=14.599;HRun=8;HaplotypeScore=52.0427;InbreedingCoeff=0.9987;MQ=84.82;MQ0=0;MQRankSum=-1.325;QD=27.94;ReadPosRankSum=1.278;VQSLOD=4.0248;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:60.13:674,60,0	1/1:0,9:9:27.08:312,27,0	0/0:21,0:21:48.01:0,48,438	0/0:22,0:22:37.23:0,37,325	0/0:20,0:20:56.99:0,57,513	1/1:2,19:21:57.17:658,57,0	1/1:2,13:15:36.11:415,36,0	1/1:3,22:25:66.15:729,66,0	1/1:3,16:19:45.13:519,45,0	0/0:31,0:31:81.02:0,81,737	0/0:25,0:25:69.03:0,69,630	0/0:19,0:19:48.02:0,48,439	1/1:2,15:17:30.09:346,30,0	1/1:1,16:17:42.12:485,42,0	1/1:2,25:27:66.20:762,66,0	0/0:29,0:29:75.03:0,75,684	1/1:0,23:22:66.20:762,66,0	1/1:3,10:13:24.07:277,24,0	1/1:8,16:24:48.13:545,48,0	1/1:1,24:25:69.12:766,69,0	1/1:1,15:17:45:499,45,0	1/1:4,21:25:60.18:692,60,0	1/1:1,13:14:39.12:450,39,0	1/1:0,9:10:23.90:257,24,0	1/1:0,16:16:48.14:554,48,0	0/0:25,0:25:72.02:0,72,656	1/1:5,25:30:60.18:693,60,0	0/0:11,0:11:24.01:0,24,220
chr10	102830524	.	T	TG	5415.07	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=15.287;DP=576;FS=0.000;HRun=4;HaplotypeScore=135.3982;InbreedingCoeff=0.9294;MQ=93.75;MQ0=0;MQRankSum=-4.519;QD=15.43;ReadPosRankSum=-1.659;VQSLOD=3.3728;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,18:27:10.52:263,11,0	1/1:6,7:13:5.42:180,5,0	0/0:27,0:27:63.16:0,63,700	0/0:27,0:27:64.73:0,65,718	0/0:18,0:18:54.15:0,54,613	1/1:13,20:34:29.56:545,30,0	1/1:9,11:20:26.93:432,27,0	1/1:17,3:21:21.73:204,22,0	1/1:7,14:21:34.69:436,35,0	0/0:28,0:28:81.22:0,81,910	0/0:17,0:17:51.15:0,51,578	0/0:17,0:17:45.13:0,45,510	1/1:7,19:26:36.57:442,37,0	1/1:9,7:16:17.86:303,18,0	1/1:6,17:23:35.97:556,36,0	0/0:26,0:26:75.20:0,75,841	0/0:31,0:31:93.07:0,93,1014	1/1:2,16:18:36.07:440,36,0	1/1:10,1:15:31.61:213,32,0	1/1:7,1:10:11.75:95,12,0	1/1:14,0:17:2.29:14,2,0	1/1:8,5:13:24.48:237,24,0	1/1:6,13:19:13.55:251,14,0	1/1:11,14:25:20.42:369,20,0	1/1:4,12:16:8.88:199,9,0	0/0:20,0:20:60.17:0,60,680	1/1:10,2:17:35.18:237,35,0	0/0:14,0:14:42.12:0,42,476
chr10	102831058	.	CTATTATTATTATTATTAT	C	3676.73	PASS	AB=0.632;AC=20;AF=0.526;AN=38;BaseQRankSum=4.635;DP=258;FS=2.358;HRun=0;HaplotypeScore=115.5177;InbreedingCoeff=0.4490;MQ=65.13;MQ0=1;MQRankSum=-5.106;QD=27.44;ReadPosRankSum=2.173;VQSLOD=2.6015;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,4:8:9.03:378,9,0	1/1:3,3:6:6.02:269,6,0	./.	./.	0/0:12,0:12:12.04:0,12,754	1/1:8,9:17:18.06:780,18,0	./.	0/0:31,0:39:3.27:0,3,55	1/1:3,3:6:3.01:127,3,0	0/0:8,0:8:3.01:0,3,254	0/0:9,0:9:3.01:0,3,46	./.	1/1:2,1:3:3.01:146,3,0	./.	1/1:2,4:6:6.02:291,6,0	0/0:3,0:3:9.03:0,9,511	0/1:4,0:11:18.01:63,0,18	1/1:16,8:25:4.92:343,5,0	0/1:8,0:16:31.40:380,0,31	./.	0/0:3,0:3:1.55:0,2,4	./.	./.	./.	1/1:6,6:12:6.02:271,6,0	0/0:2,0:5:12.04:0,12,890	1/1:10,0:23:15.05:629,15,0	0/0:9,0:9:21.07:0,21,1468
chr10	102831731	.	C	CCAGGAT	27862.43	PASS	AB=0.960;AC=39;AF=0.696;AN=56;BaseQRankSum=-7.105;DP=509;FS=1.951;HRun=0;HaplotypeScore=115.1004;InbreedingCoeff=0.9003;MQ=65.14;MQ0=0;MQRankSum=-14.492;QD=67.46;ReadPosRankSum=4.194;VQSLOD=5.5653;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,21:32:72.18:2468,72,0	1/1:1,7:9:20.80:759,21,0	0/0:13,0:13:33.11:0,33,788	0/0:12,0:12:29.77:0,30,650	0/0:9,0:9:27.08:0,27,592	1/1:2,8:10:27.09:975,27,0	1/1:9,15:27:66.23:2249,66,0	1/1:13,9:25:66.19:2028,66,0	1/1:6,7:19:33.11:1163,33,0	0/0:11,0:11:33.11:0,33,786	0/0:9,0:9:20.86:0,21,432	0/0:27,0:27:66.19:0,66,1464	1/1:4,18:27:69.24:2432,69,0	1/1:8,16:28:60.02:2038,60,0	1/1:2,15:19:48.08:1624,48,0	0/1:23,1:24:42.29:42,0,1470	1/1:8,27:36:93.32:3322,93,0	1/1:4,8:16:30.10:1084,30,0	1/1:12,6:19:48.14:1589,48,0	1/1:0,5:6:15.05:543,15,0	1/1:14,12:30:30.07:1012,30,0	1/1:9,11:20:24.06:861,24,0	1/1:3,6:11:15.05:518,15,0	1/1:13,15:28:46.02:1612,46,0	1/1:0,6:8:15.05:537,15,0	0/0:10,0:10:27.09:0,27,583	1/1:5,10:19:30.10:1007,30,0	0/0:5,0:5:12.04:0,12,254
chr10	102832176	.	C	CAA	5849.78	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=3.925;DP=545;FS=13.762;HRun=1;HaplotypeScore=158.5420;InbreedingCoeff=0.8687;MQ=54.95;MQ0=11;MQRankSum=-4.745;QD=16.29;ReadPosRankSum=-1.145;VQSLOD=0.7474;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:43,2:44:87.79:660,88,0	1/1:6,0:5:1.64:75,2,0	0/0:24,0:14:36.03:0,36,365	0/0:15,0:11:9.64:0,10,175	0/0:14,0:14:32.84:0,33,322	1/1:19,0:19:17.06:272,17,0	1/1:27,0:27:31.58:278,32,0	1/1:27,0:26:71.77:599,72,0	1/1:18,0:18:34.56:290,35,0	0/0:24,0:24:68.96:0,69,697	0/0:8,0:8:12.01:0,12,141	0/0:23,0:22:66.04:0,66,799	1/1:19,1:20:25.09:338,25,0	1/1:15,0:15:28.80:293,29,0	1/1:20,0:20:39.65:381,40,0	0/0:13,0:13:32.86:0,33,374	0/0:24,0:23:44.56:0,45,337	0/1:17,0:17:11.88:232,0,12	1/1:14,0:14:39.21:301,39,0	1/1:18,0:18:48.10:329,48,0	1/1:4,0:4:5.94:42,6,0	1/1:24,1:24:31.93:294,32,0	1/1:16,1:16:29.93:297,30,0	1/1:30,0:30:58.01:483,58,0	1/1:14,0:14:30.98:331,31,0	0/0:28,0:28:77.84:0,78,841	1/1:23,0:22:57.01:357,57,0	0/0:13,0:12:30.32:0,30,322
chr10	102832192	.	CACACACACACACACACAG	C	2225.47	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=5.656;DP=513;FS=2.292;HRun=0;HaplotypeScore=287.7892;InbreedingCoeff=0.6369;MQ=45.60;MQ0=20;MQRankSum=-6.394;QD=19.52;ReadPosRankSum=-1.976;VQSLOD=1.9351;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:25.17:0,25,936	0/0:7,0:6:9.03:0,9,374	0/0:12,0:3:3.01:0,3,45	0/0:14,0:7:5.22:0,5,179	0/0:12,0:12:24.08:0,24,1421	0/0:20,0:20:30.95:0,31,1324	0/0:26,0:26:13.67:0,14,500	1/1:18,0:16:14.87:113,15,0	0/1:18,0:18:7.97:8,0,734	0/0:20,0:20:54.18:0,54,3131	0/0:7,0:7:12.04:0,12,853	0/0:25,0:23:69.20:0,69,4760	0/0:17,0:17:36.95:0,37,1263	0/0:15,0:15:8.77:0,9,855	0/0:22,0:22:18.46:0,18,589	0/0:11,0:11:27.56:0,28,1901	0/1:21,0:20:3.04:3,0,353	0/0:16,0:16:19.58:0,20,1382	1/1:12,1:11:2.41:224,2,0	1/1:11,6:17:26.95:954,27,0	1/1:7,0:6:0.69:13,1,0	0/0:27,0:25:24.75:0,25,597	0/0:18,0:17:18.04:0,18,975	0/0:30,0:29:22.48:0,22,805	0/0:17,0:17:24.38:0,24,1094	0/0:27,0:26:78.26:0,78,4517	1/1:13,7:20:27.02:1066,27,0	0/0:13,0:11:27.08:0,27,1446
chr10	102832215	.	ACGCGCGCGCGCGAG	A	5962.05	PASS	AB=0.887;AC=33;AF=0.589;AN=56;BaseQRankSum=9.363;DP=439;FS=0.523;HRun=0;HaplotypeScore=225.0783;InbreedingCoeff=0.5509;MQ=60.39;MQ0=13;MQRankSum=-9.600;QD=19.42;ReadPosRankSum=5.555;VQSLOD=3.5223;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,12:37:13.87:280,14,0	1/1:5,2:6:9.03:163,9,0	0/1:8,0:7:2.75:3,0,23	0/0:12,0:9:3.55:0,4,55	0/0:12,0:12:15.05:0,15,627	1/1:12,5:17:12.64:370,13,0	1/1:13,7:20:3.95:124,4,0	1/1:12,0:10:17.39:219,17,0	1/1:15,0:15:2.90:427,3,0	0/0:17,0:17:36.12:0,36,1991	0/0:7,0:7:12.04:0,12,757	0/0:24,0:23:54.19:0,54,3332	1/1:13,2:15:16.32:707,16,0	1/1:8,2:10:8.38:421,8,0	1/1:13,5:18:1.71:329,2,0	0/0:10,0:10:24.08:0,24,1500	0/0:18,0:17:16.03:0,16,667	0/1:11,3:14:32.74:425,0,33	0/1:19,0:17:99:247,0,247	1/1:19,0:19:28.33:540,28,0	1/1:15,0:14:6.02:73,6,0	1/1:17,5:21:12.04:483,12,0	0/1:12,2:13:2.70:44,0,3	1/1:12,5:17:15.05:292,15,0	0/1:9,5:14:4.39:209,0,4	0/0:19,0:18:39:0,39,1969	1/1:14,0:13:25.66:606,26,0	0/0:12,0:10:21.07:0,21,1037
chr10	102832216	.	CGCGCGCGCGCGA	C	6255.81	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=9.142;DP=413;FS=0.537;HRun=0;HaplotypeScore=203.0528;InbreedingCoeff=0.6744;MQ=62.79;MQ0=12;MQRankSum=-9.165;QD=21.50;ReadPosRankSum=4.792;VQSLOD=3.8597;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:13.87:279,14,0	1/1:7,0:6:9.03:183,9,0	0/0:8,0:7:2.71:0,3,41	0/1:14,0:10:3.95:4,0,45	0/0:12,0:12:15.05:0,15,537	1/1:15,0:16:18.01:351,18,0	1/1:16,0:16:3.48:105,3,0	1/1:12,0:11:23.28:318,23,0	1/1:10,5:15:16.40:620,16,0	0/0:16,0:16:36.06:0,36,1663	0/0:7,0:7:12.04:0,12,660	0/0:23,0:22:57.20:0,57,3009	1/1:14,0:14:18.90:631,19,0	1/1:8,1:9:9.73:365,10,0	1/1:17,0:17:8.07:313,8,0	0/0:9,0:9:24.08:0,24,1289	0/0:18,0:17:16.79:0,17,601	0/1:13,0:13:3.51:384,0,4	0/1:19,0:17:74.25:347,0,74	1/1:19,0:19:28.65:584,29,0	1/1:15,0:14:6.02:98,6,0	1/1:17,0:18:12.04:416,12,0	1/1:10,0:9:3.01:56,3,0	1/1:15,0:15:15.05:306,15,0	1/1:13,0:13:9.50:218,9,0	0/0:18,0:17:36.58:0,37,1614	1/1:14,0:13:30.89:678,31,0	0/0:10,0:8:20.77:0,21,824
chr10	102832218	.	CGCGCGCGCG	C	3957.54	PASS	AB=0.962;AC=28;AF=0.500;AN=56;BaseQRankSum=10.326;DP=403;FS=1.073;HRun=0;HaplotypeScore=191.9522;InbreedingCoeff=0.2562;MQ=65.76;MQ0=9;MQRankSum=-9.662;QD=13.89;ReadPosRankSum=6.457;VQSLOD=2.1917;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,1:32:13.40:229,13,0	1/1:6,1:6:9.03:183,9,0	0/0:9,0:7:7.05:0,7,96	0/1:16,0:12:16.62:17,0,84	0/0:12,0:12:21.05:0,21,762	0/1:13,1:14:30.57:230,0,31	1/1:13,1:14:3.48:65,3,0	1/1:11,0:11:2.19:134,2,0	0/1:12,0:15:7.16:358,0,7	0/0:14,0:14:42.14:0,42,1564	0/0:8,0:8:15.05:0,15,630	0/0:21,0:20:57.20:0,57,2670	1/1:11,3:14:5.49:419,5,0	0/1:8,1:9:3.71:235,0,4	0/1:15,0:15:9.92:222,0,10	0/0:10,0:10:26.92:0,27,1204	0/0:17,0:17:17.29:0,17,681	0/1:12,0:12:66.45:232,0,66	0/1:19,0:18:99:141,0,207	1/1:19,0:19:28.57:336,29,0	1/1:16,0:15:5.99:50,6,0	0/1:18,1:18:2:240,0,2	0/1:10,0:9:3.81:50,0,4	1/1:11,4:15:15.05:280,15,0	0/1:13,0:13:8.99:179,0,9	0/0:17,0:16:48.13:0,48,1654	1/1:15,0:14:4.66:356,5,0	0/0:10,0:8:21.05:0,21,789
chr10	102832220	.	CGCGCGCGA	C	6753.77	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=8.894;DP=392;FS=6.568;HRun=0;HaplotypeScore=177.0582;InbreedingCoeff=0.7846;MQ=67.82;MQ0=6;MQRankSum=-9.365;QD=25.20;ReadPosRankSum=4.198;VQSLOD=3.5218;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:29:13.23:257,13,0	1/1:4,0:6:9.03:222,9,0	0/1:9,0:7:11.22:11,0,55	0/0:17,0:13:3.14:0,3,95	0/0:12,0:12:21.03:0,21,543	1/1:10,0:13:15.05:312,15,0	1/1:14,0:14:3.48:68,3,0	1/1:2,10:12:24.04:566,24,0	1/1:12,3:15:21.54:486,22,0	0/0:14,0:14:27.09:0,27,1056	0/0:7,0:7:12.04:0,12,464	0/0:21,0:21:57.20:0,57,2101	1/1:11,0:14:21.07:512,21,0	1/1:8,0:9:11.85:292,12,0	1/1:9,0:14:12.04:296,12,0	0/0:10,0:10:24.08:0,24,964	0/0:17,0:17:17.76:0,18,361	1/1:9,0:11:15.01:280,15,0	1/1:4,15:19:39.05:754,39,0	1/1:1,19:20:28.34:687,28,0	1/1:4,12:15:6.02:160,6,0	1/1:13,0:17:12.04:277,12,0	1/1:7,0:7:3.01:81,3,0	1/1:11,0:15:14.62:396,15,0	1/1:9,0:12:9.50:233,10,0	0/0:16,0:15:30.10:0,30,1025	1/1:1,14:15:36.10:863,36,0	0/0:10,0:8:15.04:0,15,487
chr10	102832222	.	CGCGCG	C	2478.30	PASS	AB=0.963;AC=35;AF=0.625;AN=56;BaseQRankSum=10.748;DP=376;FS=0.524;HRun=0;HaplotypeScore=176.0167;InbreedingCoeff=0.6087;MQ=71.29;MQ0=5;MQRankSum=-8.959;QD=9.50;ReadPosRankSum=7.255;VQSLOD=2.3232;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,1:26:13.33:147,13,0	1/1:6,0:6:9.02:95,9,0	0/0:10,0:8:6.68:0,7,96	0/1:18,0:14:44.81:45,0,46	0/0:12,0:12:21.05:0,21,510	1/1:11,2:13:14.98:186,15,0	1/1:9,4:13:3.48:36,3,0	1/1:12,0:12:2.97:170,3,0	1/1:15,0:15:15.83:221,16,0	0/0:13,0:13:39.12:0,39,1018	0/0:7,0:7:12.04:0,12,389	0/0:21,0:21:60.21:0,60,1780	1/1:12,0:12:18.88:234,19,0	1/1:8,0:8:8.22:129,8,0	1/1:14,0:14:8.02:132,8,0	0/0:10,0:10:26.92:0,27,804	0/0:17,0:17:17.94:0,18,447	0/1:7,1:8:24.84:124,0,25	0/1:18,0:18:99:163,0,101	1/1:19,0:20:27.86:236,28,0	1/1:16,0:15:4.66:57,5,0	1/1:15,0:15:12.04:139,12,0	1/1:7,0:7:3.01:30,3,0	1/1:14,0:14:15.04:158,15,0	1/1:10,0:10:5.93:92,6,0	0/0:15,0:14:39.60:0,40,1050	1/1:14,0:14:30.86:284,31,0	0/0:10,0:9:21.06:0,21,538
chr10	102832228	.	AG	A	554.29	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=9.783;DP=345;FS=1.164;HRun=1;HaplotypeScore=156.9651;InbreedingCoeff=0.6633;MQ=80.82;MQ0=1;MQRankSum=-9.243;QD=2.83;ReadPosRankSum=6.839;VQSLOD=-0.3155;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,6:18:12.31:64,12,0	1/1:2,3:5:8.73:50,9,0	0/0:13,0:12:15.72:0,16,168	0/0:20,0:16:1.92:0,2,100	0/0:10,0:10:18.06:0,18,273	1/1:6,7:13:14.26:73,14,0	1/1:7,5:12:2.82:14,3,0	0/1:12,0:12:9.83:10,0,57	1/1:18,0:18:6.55:34,7,0	0/0:11,0:11:33.11:0,33,512	0/0:6,0:6:12.04:0,12,189	0/0:22,0:22:63.12:0,63,906	1/1:2,6:8:20.02:104,20,0	1/1:4,2:6:11.28:56,11,0	1/1:7,5:12:11.55:62,12,0	0/0:11,0:11:27.09:0,27,426	0/0:19,0:19:11.83:0,12,125	1/1:3,3:6:11.16:54,11,0	0/0:15,0:15:1.95:0,2,87	1/1:20,0:20:7.40:19,7,0	1/1:12,0:12:4.07:12,4,0	1/1:5,7:12:10.82:46,11,0	1/1:5,1:6:2.90:16,3,0	1/1:5,8:13:14.32:76,14,0	1/1:5,3:8:8.71:49,9,0	0/0:13,0:13:36.02:0,36,507	0/1:15,0:14:8.65:15,0,9	0/0:8,0:8:14.84:0,15,224
chr10	102832230	.	C	CGCGCGCGCAT	446.85	PASS	AB=0.975;AC=4;AF=0.071;AN=56;BaseQRankSum=-1.065;DP=397;FS=24.488;HRun=0;HaplotypeScore=240.6812;InbreedingCoeff=0.3462;MQ=77.61;MQ0=1;MQRankSum=-2.922;QD=7.33;ReadPosRankSum=-1.363;VQSLOD=1.1717;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:12.98:0,13,270	0/0:6,0:6:9.03:0,9,193	0/0:14,0:13:18.07:0,18,248	0/1:18,0:16:4.37:4,0,149	0/0:10,0:10:12.04:0,12,246	0/0:14,0:14:15.05:0,15,335	0/0:16,0:16:9.47:0,9,120	0/0:13,0:13:32.69:0,33,573	0/0:18,0:18:24.33:0,24,496	0/0:13,0:13:24.05:0,24,628	0/0:7,0:7:9.03:0,9,291	0/0:21,0:21:48.15:0,48,1306	0/0:9,0:9:21.07:0,21,475	0/0:8,0:8:12.51:0,13,272	0/1:21,0:21:5.76:6,0,191	0/0:12,0:12:32.95:0,33,871	1/1:11,6:21:19.95:537,20,0	0/0:9,0:9:16.30:0,16,317	0/0:15,0:15:41.74:0,42,693	0/0:22,0:22:27.56:0,28,619	0/0:13,0:13:9.01:0,9,167	0/0:16,0:16:12.04:0,12,276	0/0:8,0:8:3.01:0,3,68	0/0:15,0:15:15.05:0,15,337	0/0:13,0:13:9.03:0,9,202	0/0:12,0:12:12.04:0,12,301	0/0:15,0:14:36.12:0,36,882	0/0:8,0:8:8.64:0,9,291
chr10	102833333	.	TA	T	16831.49	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=9.760;DP=724;FS=5.126;HRun=4;HaplotypeScore=79.5546;InbreedingCoeff=0.9975;MQ=90.75;MQ0=0;MQRankSum=-6.239;QD=32.87;ReadPosRankSum=2.674;VQSLOD=5.5943;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,39:43:99:1260,105,0	1/1:0,15:15:42.06:504,42,0	0/0:27,0:27:75.24:0,75,1002	0/0:31,0:31:68.84:0,69,902	0/0:27,0:27:78.25:0,78,1074	1/1:1,32:33:93.28:1116,93,0	1/1:1,23:24:66.20:792,66,0	1/1:2,35:37:99:1238,105,0	1/1:2,17:19:51.16:612,51,0	0/0:24,0:24:66.22:0,66,910	0/0:25,0:25:69.23:0,69,966	0/0:13,0:13:36.12:0,36,504	1/1:0,16:16:48.15:576,48,0	1/1:1,19:20:54.17:648,54,0	1/1:0,31:31:90.28:1080,90,0	0/0:33,0:33:99:0,99,1387	1/1:1,23:24:69.21:828,69,0	1/1:1,23:24:69.17:812,69,0	1/1:2,26:28:78.22:922,78,0	1/1:3,19:22:51.16:612,51,0	1/1:1,40:41:99:1368,114,0	1/1:2,28:30:81.25:972,81,0	1/1:0,25:25:72.22:864,72,0	1/1:0,23:23:69.21:828,69,0	1/1:3,22:25:60.18:720,60,0	0/0:27,0:27:78.26:0,78,1092	1/1:1,31:32:90.28:1080,90,0	0/0:5,0:5:15.05:0,15,210
chr10	102834454	.	GGTGTGTGT	G	1493.40	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.136;DP=673;FS=4.803;HRun=0;HaplotypeScore=164.5337;InbreedingCoeff=0.8367;MQ=63.22;MQ0=7;MQRankSum=-5.056;QD=12.44;ReadPosRankSum=-0.103;VQSLOD=2.5065;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:38:42.13:0,42,1256	0/0:17,0:16:24.08:0,24,845	0/0:31,0:16:3.01:0,3,67	0/0:43,0:29:8.99:0,9,119	0/0:21,0:21:45.09:0,45,1403	0/0:27,0:27:45.14:0,45,1539	0/0:25,0:25:42.14:0,42,1360	1/1:28,0:28:4.71:55,5,0	0/0:22,0:23:41.13:0,41,1158	0/0:22,0:23:36.12:0,36,1288	0/0:8,0:9:14.96:0,15,509	0/0:15,0:17:24.07:0,24,791	0/0:18,0:18:24.96:0,25,706	0/0:18,0:18:18.04:0,18,609	0/0:25,0:25:36.12:0,36,1173	0/0:20,0:21:39.05:0,39,1318	0/0:33,0:36:52.06:0,52,1827	0/0:30,0:31:39.13:0,39,1411	1/1:13,1:14:7.35:182,7,0	1/1:13,11:25:24.03:528,24,0	1/1:25,2:28:1.92:187,2,0	0/0:22,0:22:42.14:0,42,1361	0/0:18,0:20:33.11:0,33,1192	0/0:25,0:25:48.12:0,48,1765	0/0:26,0:26:38.91:0,39,1347	0/0:19,0:20:30.09:0,30,739	1/1:10,12:23:30:694,30,0	0/0:13,0:16:39.06:0,39,1055
chr10	102837421	.	TCA	T	1565.62	PASS	AB=0.823;AC=22;AF=0.423;AN=52;BaseQRankSum=4.789;DP=551;FS=7.333;HRun=0;HaplotypeScore=75.6775;InbreedingCoeff=0.1307;MQ=62.94;MQ0=7;MQRankSum=3.195;QD=4.77;ReadPosRankSum=1.535;VQSLOD=1.0069;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,7:32:6.91:146,0,7	1/1:3,5:8:9.02:97,9,0	./.	./.	0/1:15,0:15:4.73:5,0,144	0/1:12,8:20:17.71:116,0,18	0/1:12,5:17:9.70:145,0,10	0/0:24,0:24:14.75:0,15,110	0/1:15,5:20:35.73:56,0,36	0/0:18,0:17:15.77:0,16,152	0/0:12,0:12:14.96:0,15,138	0/0:21,0:21:18.06:0,18,255	1/1:8,6:14:12:131,12,0	0/1:13,7:21:22.68:126,0,23	1/1:13,12:27:26.74:257,27,0	0/1:17,6:23:99:101,0,199	1/1:12,0:25:28.41:140,28,0	0/1:15,5:20:71.48:94,0,71	0/0:7,0:10:11.87:0,12,85	0/0:4,0:11:3:0,3,26	0/0:20,0:36:9.01:0,9,95	1/1:8,3:11:6.02:65,6,0	0/0:6,0:12:3:0,3,26	1/1:34,5:40:6.62:215,7,0	0/1:13,1:14:30.63:31,0,35	0/1:17,3:20:11.70:12,0,208	0/0:14,0:14:18.85:0,19,169	0/0:6,0:6:6.02:0,6,89
chr10	102840200	.	TACAA	T	3995.99	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.977;DP=550;FS=28.674;HRun=0;HaplotypeScore=106.6326;InbreedingCoeff=0.9980;MQ=80.04;MQ0=0;MQRankSum=-11.601;QD=40.36;ReadPosRankSum=-3.906;VQSLOD=0.9161;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.29:0,84,2199	0/0:15,0:15:42.14:0,42,1120	0/0:17,0:17:42.11:0,42,1006	0/0:19,0:19:45.15:0,45,1135	0/0:21,0:21:63.17:0,63,1570	0/0:16,0:16:48.16:0,48,1242	0/0:30,0:30:81.28:0,81,2158	1/1:3,30:33:87.23:1521,87,0	0/0:16,0:16:48.16:0,48,1213	0/0:17,0:17:51.18:0,51,1351	0/0:10,0:10:30.10:0,30,767	0/0:27,0:27:69.24:0,69,1858	0/0:27,0:27:57.20:0,57,1479	0/0:27,0:27:69.24:0,69,1702	0/0:22,0:22:51.16:0,51,1266	0/0:24,0:24:66.22:0,66,1722	0/0:21,0:21:63.22:0,63,1700	0/0:16,0:16:48.16:0,48,1296	1/1:3,11:14:30.10:554,30,0	1/1:2,12:14:27.09:508,27,0	1/1:2,15:17:24.08:445,24,0	0/0:16,0:16:45.15:0,45,1158	0/0:11,0:11:33.11:0,33,838	0/0:30,0:30:75.26:0,75,1919	0/0:15,0:15:45.15:0,45,1178	0/0:17,0:17:48.16:0,48,1228	1/1:3,18:21:51.17:967,51,0	0/0:8,0:8:21.07:0,21,567
chr10	102840242	.	A	ACC	2037.01	PASS	AB=0.882;AC=28;AF=0.500;AN=56;BaseQRankSum=-6.541;DP=502;FS=1.602;HRun=10;HaplotypeScore=94.0393;InbreedingCoeff=0.5339;MQ=72.72;MQ0=0;MQRankSum=1.988;QD=6.68;ReadPosRankSum=-4.374;VQSLOD=-0.5571;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,3:30:22.98:267,23,0	1/1:4,6:10:6.02:89,6,0	0/1:10,0:11:13.33:13,0,39	0/1:12,0:12:25.57:26,0,46	0/0:18,0:20:23.43:0,23,252	1/1:11,2:14:18.87:177,19,0	0/1:15,3:32:2.92:211,0,3	0/1:26,0:26:6.29:6,0,115	1/1:9,1:10:17.97:166,18,0	0/0:10,0:10:14.97:0,15,152	0/0:10,0:11:29.77:0,30,272	0/0:21,0:21:32.83:0,33,328	1/1:6,9:15:2.94:45,3,0	0/1:15,0:16:20.38:178,0,20	1/1:6,14:20:5.51:54,6,0	0/0:20,0:23:47.24:0,47,432	1/1:24,0:24:28.96:256,29,0	1/1:14,3:17:42.84:398,43,0	0/0:23,0:23:27.56:0,28,238	0/0:15,0:15:34.90:0,35,212	0/0:29,0:29:50.12:0,50,268	1/1:11,0:11:9:94,9,0	1/1:6,9:17:8.44:63,8,0	0/1:16,11:28:19.80:52,0,20	1/1:12,0:12:14.51:146,15,0	0/0:13,0:14:20.63:0,21,175	0/0:21,0:21:46.79:0,47,293	0/0:10,0:10:23.79:0,24,226
chr10	102840876	.	GC	G	406.73	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.791;DP=684;FS=7.573;HRun=4;HaplotypeScore=69.3806;InbreedingCoeff=0.9432;MQ=79.88;MQ0=0;MQRankSum=-5.242;QD=23.93;ReadPosRankSum=0.501;VQSLOD=2.2088;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,147,2022	0/0:12,0:12:36.07:0,36,464	0/0:20,0:20:54.09:0,54,712	0/0:18,0:18:54.15:0,54,715	0/0:31,0:31:90.30:0,90,1255	0/0:20,0:20:57.19:0,57,798	0/0:32,0:32:93.29:0,93,1283	0/0:29,0:29:87.27:0,87,1188	0/0:29,0:29:78.25:0,78,1075	0/0:22,0:22:60.19:0,60,825	0/0:8,0:8:24.08:0,24,336	0/0:26,0:26:78.24:0,78,1073	0/0:24,0:24:72.23:0,72,990	0/0:34,0:34:96.31:0,96,1319	0/0:25,0:25:72.21:0,72,973	0/0:25,0:25:75.25:0,75,1048	1/1:0,17:17:42.13:502,42,0	0/0:12,0:12:36.12:0,36,504	0/0:18,0:18:48.14:0,48,645	0/0:24,0:24:72.24:0,72,1007	0/0:34,0:34:99:0,102,1427	0/0:30,0:30:84.28:0,84,1173	0/0:20,0:20:57.19:0,57,795	0/0:27,0:27:78.26:0,78,1087	0/0:21,0:21:57.19:0,57,787	0/0:37,0:37:99:0,102,1411	0/0:34,0:34:99:0,99,1311	0/0:3,0:3:9.03:0,9,126
chr10	102840888	.	G	GGCCCTAACACA	2551.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.453;DP=684;FS=9.983;HRun=0;HaplotypeScore=213.5964;InbreedingCoeff=0.9035;MQ=81.69;MQ0=0;MQRankSum=-7.033;QD=121.52;ReadPosRankSum=-0.198;VQSLOD=3.1403;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,156,5104	0/0:12,0:12:36.11:0,36,1150	0/0:21,0:21:57.17:0,57,1597	0/0:21,0:21:54.18:0,54,1633	0/0:32,0:32:96.28:0,96,3255	0/0:21,0:21:57.20:0,57,1997	0/0:33,0:33:99:0,99,3054	0/0:28,0:28:78.25:0,78,2539	0/0:26,0:26:75.26:0,75,2548	0/0:22,0:22:60.20:0,60,2040	0/0:9,0:9:24.05:0,24,783	0/0:27,0:27:78.25:0,78,2601	0/0:24,0:24:66.21:0,66,2248	0/0:28,0:28:84.25:0,84,2831	0/0:29,0:29:87.26:0,87,2939	0/0:24,0:24:69.20:0,69,2158	1/1:13,8:21:57.18:2647,57,0	0/0:14,0:14:42.14:0,42,1405	0/0:19,0:19:54.19:0,54,1755	0/0:24,0:24:72.25:0,72,2425	0/0:35,0:35:99:0,102,3456	0/0:31,0:31:84.27:0,84,2907	0/0:18,0:18:51.16:0,51,1678	0/0:28,0:28:81.26:0,81,2795	0/0:19,0:19:57.20:0,57,2009	0/0:31,0:31:87.30:0,87,2947	0/0:31,0:31:93.28:0,93,3078	0/0:2,0:2:6.02:0,6,133
chr10	102841456	.	CTG	C	240.35	PASS	AB=0.952;AC=5;AF=0.093;AN=54;BaseQRankSum=9.009;DP=948;FS=0.615;HRun=0;HaplotypeScore=213.2907;InbreedingCoeff=0.1567;MQ=43.81;MQ0=62;MQRankSum=-8.939;QD=1.82;ReadPosRankSum=-4.570;VQSLOD=1.4699;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:44:93.03:0,93,1641	0/0:18,0:15:8.22:0,8,299	./.	0/0:23,0:1:3:0,3,28	0/0:54,0:51:41.09:0,41,868	0/0:29,0:26:49.36:0,49,718	0/0:40,0:34:74.94:0,75,1311	0/1:59,0:19:57.70:200,0,58	0/0:24,0:22:45.84:0,46,945	0/0:57,0:50:83.41:0,83,1965	0/0:24,0:22:23.70:0,24,383	0/0:31,0:31:80.69:0,81,1398	0/0:30,0:29:73.06:0,73,1267	0/0:25,0:24:66.17:0,66,1164	0/0:27,0:25:63.16:0,63,1143	0/0:33,0:30:87.17:0,87,1540	1/1:8,1:6:2.94:18,3,0	0/0:32,0:31:89.97:0,90,1500	0/1:28,3:20:75.16:75,0,81	0/0:34,0:29:5.46:0,5,152	0/0:44,4:37:11.21:0,11,201	0/0:41,0:38:42.87:0,43,646	0/0:45,0:42:33.95:0,34,841	0/0:41,0:40:87.22:0,87,1595	0/0:31,0:28:33.96:0,34,620	0/0:51,0:47:99:0,120,1944	0/1:31,2:28:57.21:57,0,111	0/0:22,0:21:15.17:0,15,905
chr10	102841458	.	G	GTC	1259.65	PASS	AB=0.916;AC=8;AF=0.154;AN=52;BaseQRankSum=6.252;DP=976;FS=3.427;HRun=0;HaplotypeScore=216.7540;InbreedingCoeff=0.1331;MQ=43.55;MQ0=65;MQRankSum=-7.150;QD=4.48;ReadPosRankSum=-2.487;VQSLOD=2.8396;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:43:87.17:0,87,1090	0/1:18,0:15:0.47:0,0,171	./.	0/0:24,0:1:3.01:0,3,38	0/0:53,0:51:47.73:0,48,565	0/0:30,0:29:41.05:0,41,463	0/0:39,0:36:67.07:0,67,825	1/1:57,3:20:33.99:354,34,0	0/0:23,0:22:48.01:0,48,610	0/0:55,0:50:57.28:0,57,1348	0/0:25,0:23:21.07:0,21,267	0/0:30,0:30:77.99:0,78,949	0/0:29,0:28:64:0,64,828	0/0:25,0:24:56.98:0,57,725	0/0:30,0:28:57.18:0,57,725	0/0:33,0:30:78.23:0,78,970	./.	0/0:34,0:33:83.91:0,84,1001	0/1:32,3:22:13.62:421,0,14	0/1:28,3:29:42.40:42,0,124	0/1:40,8:39:69.06:69,0,115	0/1:41,1:38:14.14:14,0,366	0/0:44,0:43:50.86:0,51,615	0/0:41,0:40:81.26:0,81,1030	0/0:27,0:27:33.06:0,33,419	0/0:51,0:48:61.36:0,61,1218	0/1:23,8:30:35.31:491,0,35	0/0:25,0:24:23.38:0,23,649
chr10	102841522	.	G	GTC	165.20	PASS	AB=0.978;AC=8;AF=0.148;AN=54;BaseQRankSum=7.880;DP=1024;FS=42.393;HRun=0;HaplotypeScore=260.7576;InbreedingCoeff=0.1413;MQ=42.46;MQ0=73;MQRankSum=-4.845;QD=0.71;ReadPosRankSum=1.827;VQSLOD=1.1252;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:47:71.80:0,72,933	0/0:11,0:10:9.03:0,9,117	./.	0/1:41,0:7:9.98:15,0,10	0/0:50,0:46:36.96:0,37,668	0/0:37,0:32:26.41:0,26,779	0/0:46,0:42:90.29:0,90,1168	0/0:59,0:13:9:0,9,100	0/0:35,0:32:72.22:0,72,921	0/0:61,0:54:95.68:0,96,1408	0/0:40,0:37:38.91:0,39,474	0/0:41,0:39:82.56:0,83,1169	0/0:38,0:35:52.31:0,52,608	0/0:31,0:27:53.67:0,54,640	0/0:34,1:33:30.85:0,31,881	0/1:25,0:23:20.74:21,0,418	1/1:2,0:2:3.01:37,3,0	0/0:32,0:32:86.59:0,87,1067	0/1:38,1:19:21.55:51,0,22	0/0:32,1:26:7.97:0,8,51	0/1:43,2:32:0:0,0,0	0/0:39,1:35:19.45:0,19,501	0/0:37,0:34:39.05:0,39,506	0/0:44,0:42:96.30:0,96,1240	0/0:30,1:28:15.08:0,15,383	0/1:49,0:45:97.05:97,0,954	0/1:27,2:22:24.51:68,0,25	0/0:23,0:22:53.99:0,54,641
chr10	102841530	.	CTG	C	339.96	PASS	AB=0.902;AC=10;AF=0.185;AN=54;BaseQRankSum=8.830;DP=1006;FS=45.104;HRun=0;HaplotypeScore=247.6949;InbreedingCoeff=-0.0936;MQ=42.51;MQ0=67;MQRankSum=-3.465;QD=1.11;ReadPosRankSum=-0.739;VQSLOD=1.1444;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,4:44:40.84:0,41,1342	0/0:9,1:8:9.03:0,9,173	./.	0/1:46,1:6:8.13:8,0,18	0/1:40,7:43:71.14:71,0,911	0/0:34,2:31:29.76:0,30,1140	0/0:43,3:42:99:0,101,1764	0/0:57,0:10:14.98:0,15,181	0/0:34,1:33:75.13:0,75,1363	0/0:56,1:49:86.65:0,87,2136	0/0:37,3:37:37.39:0,37,672	0/0:36,2:36:93.29:0,93,1688	0/0:32,5:33:23.10:0,23,945	0/0:30,1:27:44.47:0,44,977	0/1:32,4:35:5.01:5,0,1283	0/1:21,4:23:32.98:33,0,704	1/1:1,0:1:2.50:9,2,0	0/0:34,1:35:57.09:0,57,1580	0/1:31,2:14:99:107,0,122	0/0:27,5:25:2.67:0,3,67	0/0:39,2:31:2.94:0,3,18	0/1:37,5:37:31.27:31,0,840	0/0:34,1:32:43.03:0,43,774	0/0:49,1:48:91.29:0,91,1776	0/0:30,4:31:1.19:0,1,640	0/1:44,7:47:99:120,0,1597	0/1:21,3:17:23.97:88,0,24	0/0:22,0:21:54.05:0,54,957
chr10	102841542	.	C	CTG	35.44	PASS	AB=0.944;AC=6;AF=0.107;AN=56;BaseQRankSum=5.218;DP=997;FS=29.533;HRun=0;HaplotypeScore=277.7480;InbreedingCoeff=0.1233;MQ=42.30;MQ0=55;MQRankSum=-0.579;QD=0.19;ReadPosRankSum=0.782;VQSLOD=0.8348;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:75.20:0,75,1104	0/0:10,0:8:12.04:0,12,174	0/0:21,0:1:0.47:0,0,1	0/0:54,0:10:6.99:0,7,38	0/0:42,2:41:2.04:0,2,570	0/0:34,0:32:54.61:0,55,863	0/0:42,1:40:99:0,102,1398	0/0:54,0:14:36.10:0,36,518	0/0:38,0:36:77.86:0,78,1052	0/1:57,5:56:23.31:23,0,1820	0/1:32,3:33:28.06:28,0,301	0/0:39,0:37:83.59:0,84,1182	0/0:32,3:31:8.53:0,9,700	0/0:30,2:29:31.50:0,31,758	0/0:39,0:37:81.16:0,81,1072	0/0:27,0:27:8.43:0,8,632	1/1:1,0:1:2.98:22,3,0	0/0:35,0:35:75:0,75,1250	0/0:29,0:16:23.94:0,24,255	0/0:29,0:25:23.35:0,23,258	0/0:38,1:30:2.97:0,3,34	0/1:35,2:34:59.82:60,0,591	0/0:37,2:36:55.21:0,55,674	0/1:50,1:48:19.64:20,0,1165	0/0:33,1:32:50.99:0,51,657	0/0:50,1:50:99:0,113,1573	0/0:21,0:15:13.19:0,13,91	0/0:21,1:21:47.29:0,47,587
chr10	102841776	.	C	CTG	142.91	PASS	AB=0.987;AC=7;AF=0.130;AN=54;BaseQRankSum=6.186;DP=1034;FS=68.217;HRun=0;HaplotypeScore=284.8687;InbreedingCoeff=0.0538;MQ=37.91;MQ0=52;MQRankSum=-5.386;QD=0.68;ReadPosRankSum=-3.327;VQSLOD=-0.6896;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:53:46.01:0,46,666	0/0:20,0:17:26.56:0,27,319	0/0:7,0:1:3.01:0,3,45	./.	0/0:44,0:43:57.15:0,57,827	0/0:38,0:34:56.61:0,57,732	0/0:34,0:29:38.78:0,39,533	0/0:81,0:37:99:0,109,1537	0/0:32,0:30:23.71:0,24,613	0/1:67,5:66:99:210,0,1596	0/0:33,0:31:42.01:0,42,588	0/0:34,1:33:56.86:0,57,871	0/1:36,0:34:0.84:1,0,855	0/1:38,0:34:2.02:2,0,446	0/0:34,1:31:14.86:0,15,228	0/1:33,0:31:12.21:12,0,575	1/1:3,0:2:1.72:4,2,0	0/1:28,0:27:13.47:13,0,674	0/0:39,0:19:3.69:0,4,561	0/0:33,0:30:39.73:0,40,576	0/0:50,0:43:62.84:0,63,854	0/0:40,1:34:20.97:0,21,304	0/0:32,0:32:42.13:0,42,638	0/0:42,0:38:36.02:0,36,550	0/0:45,1:40:46.43:0,46,750	0/0:66,0:60:27.74:0,28,1702	0/0:27,0:26:39.44:0,39,666	0/0:14,0:11:23.91:0,24,366
chr10	102841834	.	GTC	G	812.79	PASS	AB=0.921;AC=9;AF=0.161;AN=56;BaseQRankSum=3.081;DP=989;FS=0.000;HRun=0;HaplotypeScore=265.4196;InbreedingCoeff=0.6091;MQ=50.16;MQ0=33;MQRankSum=-1.778;QD=4.78;ReadPosRankSum=-0.222;VQSLOD=2.5946;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:67,0:62:99:0,108,1566	0/0:12,0:12:33.04:0,33,433	0/0:46,0:13:10.20:0,10,192	0/1:71,0:20:8.14:8,0,47	0/0:42,0:39:57.16:0,57,808	0/0:47,0:43:77.14:0,77,1057	0/0:39,0:36:72.24:0,72,1115	0/1:27,2:20:57.47:57,0,117	0/0:49,0:46:95.89:0,96,1312	0/0:58,0:51:99:0,141,1984	0/0:38,0:36:38.77:0,39,556	0/0:36,0:34:59.91:0,60,724	0/0:45,0:42:95.72:0,96,1332	0/0:32,0:29:34.03:0,34,544	0/0:32,0:31:50.99:0,51,663	0/0:35,0:35:72.08:0,72,962	0/0:6,0:5:5.92:0,6,39	0/0:24,0:23:58.07:0,58,839	0/1:19,5:12:6.77:240,0,7	1/1:6,5:10:15.01:173,15,0	1/1:16,9:19:23.83:268,24,0	0/0:35,0:33:53.85:0,54,694	0/0:25,0:22:21.07:0,21,321	0/0:56,0:54:56.85:0,57,917	0/0:31,0:31:71.32:0,71,1051	0/0:48,0:43:98.74:0,99,1526	1/1:4,6:10:23.61:222,24,0	0/0:16,0:14:36.06:0,36,508
chr10	102841890	.	GTC	G	109.22	PASS	AB=1.000;AC=10;AF=0.185;AN=54;BaseQRankSum=7.884;DP=886;FS=20.825;HRun=0;HaplotypeScore=256.4329;InbreedingCoeff=0.5710;MQ=43.13;MQ0=31;MQRankSum=-5.652;QD=0.67;ReadPosRankSum=-2.104;VQSLOD=1.0570;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:46:75.20:0,75,1143	0/0:19,0:18:21.21:0,21,443	./.	0/1:56,0:10:0.26:0,0,31	0/0:38,0:37:66.14:0,66,1022	0/0:39,0:37:42.47:0,42,744	0/0:33,1:28:40.83:0,41,639	1/1:28,2:13:9.80:140,10,0	0/0:54,0:53:49.50:0,50,1327	0/0:54,0:49:59.83:0,60,1444	0/0:28,0:27:26.93:0,27,399	0/0:37,0:37:17.81:0,18,945	0/0:23,0:22:14.36:0,14,507	0/0:32,0:31:8.81:0,9,563	0/0:26,0:26:8.46:0,8,259	0/1:42,0:41:10.91:11,0,949	0/0:2,0:2:3:0,3,28	0/0:23,0:23:47.37:0,47,790	1/1:11,2:4:4.47:43,4,0	1/1:10,0:10:0.44:1,0,0	1/1:11,2:9:5.89:37,6,0	0/0:58,0:54:49.32:0,49,830	0/0:27,0:24:24.05:0,24,370	0/0:50,0:47:71.93:0,72,1153	0/0:41,0:40:52.57:0,53,937	0/0:50,0:46:53.46:0,53,1359	0/0:6,0:6:8.79:0,9,74	0/0:10,0:9:12.04:0,12,189
chr10	102841896	.	CTCTCTCTT	C	538.51	PASS	AB=0.965;AC=17;AF=0.304;AN=56;BaseQRankSum=5.942;DP=888;FS=35.752;HRun=0;HaplotypeScore=309.8954;InbreedingCoeff=-0.3377;MQ=43.86;MQ0=26;MQRankSum=-6.199;QD=1.07;ReadPosRankSum=-5.260;VQSLOD=0.6702;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:43:47.87:0,48,1792	0/1:20,1:20:42.80:43,0,644	1/1:16,0:1:2.60:10,3,0	0/0:59,0:11:4.55:0,5,72	0/0:39,0:39:75:0,75,2138	0/1:37,2:37:19.48:19,0,1035	0/1:34,1:29:28.20:28,0,958	0/0:30,0:13:22.50:0,23,236	0/1:50,1:49:55.39:55,0,2136	0/1:53,2:51:85.93:86,0,3198	0/0:23,1:22:23.45:0,23,822	0/1:36,3:38:99:194,0,2208	0/1:26,2:27:49.63:50,0,656	0/1:29,2:30:21.58:22,0,846	0/1:22,2:24:65.93:66,0,342	0/1:39,2:40:11.05:11,0,2101	0/0:1,0:1:3.01:0,3,68	0/0:25,0:24:40.55:0,41,1541	0/0:8,0:4:9.03:0,9,182	0/1:10,0:10:26.71:27,0,69	0/1:15,0:11:23.43:23,0,42	0/0:57,2:54:35.79:0,36,1248	0/0:26,1:24:11.10:0,11,642	0/0:54,0:51:52.12:0,52,2183	0/1:40,1:40:37.91:38,0,1518	0/1:48,0:45:14.13:14,0,2721	0/1:8,0:8:7.35:7,0,117	0/0:10,0:10:11.74:0,12,406
chr10	102841900	.	CTCTT	C	504.14	PASS	AB=0.995;AC=20;AF=0.357;AN=56;BaseQRankSum=7.564;DP=880;FS=41.093;HRun=0;HaplotypeScore=268.3772;InbreedingCoeff=-0.3639;MQ=43.71;MQ0=26;MQRankSum=-5.958;QD=0.93;ReadPosRankSum=-5.796;VQSLOD=-0.4597;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,2:38:26.47:0,26,1196	0/1:21,0:20:31.05:31,0,411	1/1:18,0:1:1.55:4,2,0	0/0:64,0:12:11.35:0,11,74	0/0:40,0:40:74.99:0,75,1373	0/1:37,2:37:45.18:45,0,729	0/1:38,0:31:51.36:51,0,608	0/1:27,0:11:6.04:6,0,61	0/1:50,0:49:43.48:43,0,1497	0/1:52,0:48:42.20:42,0,1848	0/0:24,0:22:23.96:0,24,525	0/1:40,0:39:85.08:85,0,1343	0/1:26,1:26:71.25:71,0,413	0/1:33,0:32:22.87:23,0,630	0/1:23,0:23:31.20:31,0,221	0/1:41,0:40:41.65:42,0,1272	0/0:1,0:1:3.01:0,3,46	0/0:24,0:23:25.15:0,25,1048	0/0:7,0:4:8.90:0,9,70	0/1:10,0:10:19.46:27,0,19	1/1:13,0:10:2.46:30,2,0	0/0:55,2:52:0.50:0,1,928	0/0:28,1:27:12.02:0,12,471	0/0:45,3:48:6.42:0,6,1459	0/1:42,0:41:23.74:24,0,1016	0/1:45,0:42:77.88:78,0,1469	0/1:10,0:8:18.45:18,0,26	0/1:12,0:12:3.73:4,0,247
chr10	102841910	.	C	CTCTG	11486.44	PASS	AB=0.904;AC=32;AF=0.571;AN=56;BaseQRankSum=-2.849;DP=869;FS=10.416;HRun=0;HaplotypeScore=235.2925;InbreedingCoeff=0.6058;MQ=43.60;MQ0=29;MQRankSum=3.958;QD=21.51;ReadPosRankSum=-1.907;VQSLOD=2.7101;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:35,4:35:47.81:1020,48,0	1/1:19,2:20:16.84:342,17,0	0/0:16,0:1:1.82:0,2,5	0/0:63,0:13:1.60:0,2,73	0/0:43,0:41:56.73:0,57,849	1/1:41,1:40:21.24:749,21,0	1/1:37,2:31:51.02:817,51,0	1/1:26,0:11:14.34:175,14,0	1/1:38,7:43:47.77:1359,48,0	0/0:50,0:46:85.57:0,86,1373	0/0:21,0:19:20.91:0,21,230	0/0:40,0:38:5.85:0,6,885	1/1:25,3:27:15.56:821,16,0	1/1:25,6:31:41.43:711,41,0	0/1:9,14:24:1.08:48,0,1	0/0:37,0:37:19.71:0,20,851	1/1:3,0:1:4.99:25,5,0	1/1:20,6:25:33.40:1182,33,0	0/1:9,0:5:30.67:31,0,49	0/1:15,0:13:26.01:39,0,26	0/0:15,0:11:2.61:0,3,20	1/1:44,5:44:53.25:1217,53,0	1/1:32,2:32:28.22:561,28,0	1/1:47,4:49:74.36:1423,74,0	1/1:35,2:35:48.84:907,49,0	0/0:41,0:37:19.13:0,19,908	0/1:14,0:10:61.29:61,0,73	0/0:9,0:9:12.04:0,12,194
chr10	102841932	.	CTG	C	393.87	PASS	AB=0.896;AC=6;AF=0.107;AN=56;BaseQRankSum=2.669;DP=958;FS=7.194;HRun=0;HaplotypeScore=254.5738;InbreedingCoeff=-0.1337;MQ=43.51;MQ0=42;MQRankSum=-3.381;QD=2.34;ReadPosRankSum=-5.563;VQSLOD=0.6618;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:32:64.05:0,64,1008	0/0:20,0:19:26.83:0,27,355	0/1:33,0:4:9.52:10,0,45	0/0:66,0:10:0:0,0,93	0/0:49,0:47:72.19:0,72,1281	0/0:43,0:41:74.76:0,75,1155	0/0:36,0:27:53.30:0,53,803	0/1:35,0:18:99:123,0,273	0/0:43,0:41:57.86:0,58,1087	0/0:60,0:55:99:0,134,2136	0/0:26,0:24:21.04:0,21,470	0/0:42,0:40:68.52:0,69,1350	0/0:23,0:22:51.15:0,51,945	0/0:35,0:34:34.56:0,35,766	0/0:19,0:19:15:0,15,246	0/0:35,0:35:80.35:0,80,1294	0/0:4,0:2:6.01:0,6,61	0/0:38,0:37:67.58:0,68,1253	0/1:27,2:13:80.71:81,0,293	0/1:22,6:24:92.73:120,0,93	0/1:12,9:15:38.86:168,0,39	0/0:50,0:45:65.32:0,65,919	0/0:31,0:28:35.35:0,35,543	0/0:48,0:46:55.37:0,55,1167	0/0:34,0:32:20.09:0,20,586	0/0:43,0:39:99:0,105,1583	0/1:20,2:17:12.67:13,0,454	0/0:9,0:9:20.83:0,21,327
chr10	102841976	.	GTC	G	398.44	PASS	AB=0.909;AC=10;AF=0.185;AN=54;BaseQRankSum=9.391;DP=894;FS=4.297;HRun=0;HaplotypeScore=217.5640;InbreedingCoeff=0.2807;MQ=45.57;MQ0=40;MQRankSum=-2.256;QD=1.51;ReadPosRankSum=1.192;VQSLOD=2.6489;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,2:39:65.43:0,65,998	0/0:12,2:13:19.80:0,20,243	./.	0/1:52,0:9:0.03:0,0,0	0/0:41,0:39:48.15:0,48,742	0/0:38,3:39:87.21:0,87,1284	0/1:37,3:36:10.60:11,0,803	0/1:27,1:21:21.61:25,0,22	0/0:36,2:36:44.34:0,44,1109	0/0:45,2:44:18.07:0,18,1259	0/0:25,1:24:0.90:0,1,494	0/0:28,2:28:36.05:0,36,806	0/0:23,2:24:9.39:0,9,617	0/1:23,2:24:12.49:12,0,581	0/0:28,0:27:50.83:0,51,788	0/0:30,3:34:26.31:0,26,744	0/0:2,0:1:6.02:0,6,80	0/0:31,1:32:22.13:0,22,993	1/1:30,1:15:6.64:120,7,0	1/1:21,3:29:18.03:178,18,0	0/1:21,0:19:9.25:9,0,52	0/0:40,1:41:51.14:0,51,770	0/0:29,0:26:33.10:0,33,509	0/0:53,1:54:94.20:0,94,1465	0/0:31,0:30:36.12:0,36,553	0/0:43,3:43:68.40:0,68,1537	0/1:15,2:19:14.71:182,0,15	0/0:10,0:10:24.08:0,24,366
chr10	102842052	.	GTC	G	173.61	PASS	AB=0.906;AC=5;AF=0.089;AN=56;BaseQRankSum=1.421;DP=668;FS=4.915;HRun=0;HaplotypeScore=128.6740;InbreedingCoeff=0.3466;MQ=47.14;MQ0=34;MQRankSum=0.553;QD=2.28;ReadPosRankSum=-1.495;VQSLOD=2.0453;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:42:33.81:0,34,381	0/0:7,0:7:3:0,3,25	0/0:16,0:5:2.97:0,3,20	0/0:35,0:6:3:0,3,28	0/0:17,0:16:20.83:0,21,203	0/0:27,0:26:40.39:0,40,350	0/0:36,0:32:20.14:0,20,325	0/1:17,7:20:1.14:82,0,1	0/0:37,0:36:38.17:0,38,465	0/0:30,0:29:9.08:0,9,473	0/0:24,0:24:23.85:0,24,190	0/0:22,0:22:14.26:0,14,324	0/0:16,0:15:20.17:0,20,193	0/1:16,1:17:5.95:117,0,6	0/0:26,0:24:12.22:0,12,270	0/0:25,0:25:35.95:0,36,373	1/1:6,8:13:10.91:77,11,0	0/0:15,0:15:26.01:0,26,207	0/0:9,0:6:5.96:0,6,43	0/0:20,0:19:11.61:0,12,65	0/0:23,0:22:28.96:0,29,228	0/0:34,0:32:12.81:0,13,259	0/0:17,0:14:20.99:0,21,190	0/0:52,0:47:53.20:0,53,467	0/1:20,0:20:12.67:13,0,65	0/0:29,0:29:29.15:0,29,421	0/0:16,0:15:6.71:0,7,124	0/0:11,0:11:18.43:0,18,168
chr10	102842054	.	C	CTGTCTG	3168.17	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=3.782;DP=666;FS=16.375;HRun=0;HaplotypeScore=159.1458;InbreedingCoeff=0.9546;MQ=46.02;MQ0=32;MQRankSum=-3.472;QD=29.07;ReadPosRankSum=-2.199;VQSLOD=2.0773;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:40:57.39:0,57,1232	0/0:7,0:7:9.03:0,9,172	0/0:15,0:4:12.03:0,12,187	0/0:33,0:5:8.57:0,9,173	0/0:18,0:17:27.09:0,27,547	0/0:30,0:29:49.49:0,49,945	0/0:37,0:33:56.19:0,56,1189	1/1:26,0:22:50.91:604,51,0	0/0:37,0:36:52.39:0,52,1363	0/0:29,0:28:66.05:0,66,1326	0/0:24,0:24:29.25:0,29,640	0/0:22,0:22:54.19:0,54,1218	0/0:16,0:15:41.94:0,42,682	0/0:18,0:18:39.52:0,40,529	0/0:25,0:23:57.20:0,57,1162	0/0:25,0:25:47.89:0,48,835	1/1:16,0:14:11.21:82,11,0	0/0:15,0:15:20.67:0,21,316	1/1:8,1:7:17.50:333,18,0	1/1:18,1:19:18.55:484,19,0	1/1:22,0:22:26.23:986,26,0	0/0:35,0:33:49.06:0,49,927	0/0:17,0:14:23.74:0,24,460	0/0:49,0:44:67.63:0,68,1348	0/0:18,0:18:16.95:0,17,344	0/0:28,0:28:81.25:0,81,1606	1/1:11,4:14:29.56:863,30,0	0/0:13,0:13:33.38:0,33,544
chr10	102842381	.	C	CT	1164.32	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.933;DP=724;FS=0.698;HRun=1;HaplotypeScore=70.2302;InbreedingCoeff=0.9959;MQ=88.27;MQ0=0;MQRankSum=-2.438;QD=37.56;ReadPosRankSum=1.565;VQSLOD=4.2502;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,1829	0/0:9,0:9:21.07:0,21,273	0/0:25,0:25:69.22:0,69,891	0/0:34,0:34:95.77:0,96,1178	0/0:18,0:18:45.15:0,45,583	0/0:23,0:23:63.17:0,63,786	0/0:28,0:28:84.26:0,84,1075	0/0:34,0:34:96.30:0,96,1233	0/0:25,0:25:72.23:0,72,931	0/0:20,0:20:60.18:0,60,757	0/0:17,0:17:42.11:0,42,518	0/0:36,0:36:99:0,102,1324	0/0:33,0:33:96.31:0,96,1245	0/0:25,0:25:75.24:0,75,973	0/0:24,0:23:72.22:0,72,919	0/0:24,0:24:67.10:0,67,857	1/1:0,31:31:84.28:1259,84,0	0/0:21,0:21:60.19:0,60,776	0/0:23,0:23:69.22:0,69,895	0/0:27,0:27:75.24:0,75,971	0/0:39,0:39:62.45:0,62,1229	0/0:26,0:26:69.22:0,69,895	0/0:17,0:17:42.14:0,42,544	0/0:26,0:26:72.23:0,72,934	0/0:22,0:22:63.20:0,63,817	0/0:28,0:28:81.26:0,81,1039	0/0:26,0:26:78.24:0,78,998	0/0:15,0:15:44.87:0,45,537
chr10	102843366	.	TGTAAGACTTTA	T	3991.46	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.216;DP=605;FS=45.057;HRun=0;HaplotypeScore=185.0369;InbreedingCoeff=0.9781;MQ=88.21;MQ0=0;MQRankSum=-8.183;QD=64.38;ReadPosRankSum=-1.590;VQSLOD=1.6428;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,5960	0/0:14,0:14:42.13:0,42,2173	0/0:26,0:26:78.24:0,78,3861	0/0:19,0:19:54.19:0,54,2737	0/0:31,0:31:90.31:0,90,4767	0/0:23,0:23:66.23:0,66,3846	0/0:26,0:26:75.24:0,75,4001	1/1:0,9:9:27.08:660,27,0	0/0:28,0:28:81.28:0,81,4429	0/0:30,0:30:90.31:0,90,4815	0/0:21,0:21:63.22:0,63,3443	0/0:23,0:23:69.24:0,69,3712	0/0:26,0:26:75.26:0,75,4223	0/0:28,0:28:81.28:0,81,4285	0/0:30,0:30:90.31:0,90,4855	0/0:25,0:25:75.26:0,75,4177	1/1:0,14:14:12.04:435,12,0	0/0:24,0:24:72.25:0,72,3760	1/1:0,5:5:15.05:467,15,0	1/1:0,11:11:30.10:1088,30,0	1/1:2,9:10:9.03:269,9,0	0/0:26,0:26:78.27:0,78,4472	0/0:19,0:19:54.16:0,54,2904	0/0:18,0:18:51.18:0,51,2901	0/0:24,0:24:72.25:0,72,3917	0/0:26,0:26:75.26:0,75,4154	1/1:1,11:12:30.10:1073,30,0	0/0:20,0:20:60.21:0,60,3242
chr10	102844657	.	T	TACACAC	1053.02	PASS	AB=0.995;AC=27;AF=0.519;AN=52;BaseQRankSum=7.886;DP=428;FS=13.957;HRun=0;HaplotypeScore=106.6424;InbreedingCoeff=0.3345;MQ=67.44;MQ0=14;MQRankSum=-5.162;QD=4.07;ReadPosRankSum=-2.555;VQSLOD=0.5461;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:17:8.97:71,9,0	1/1:4,0:3:3.46:24,3,0	0/0:26,0:17:44.53:0,45,800	0/1:25,0:20:0.40:0,0,715	0/0:10,0:10:27.09:0,27,560	1/1:12,0:11:2.66:24,3,0	1/1:17,0:12:6.47:52,6,0	0/1:36,0:36:99:116,0,704	1/1:11,0:11:6.26:62,6,0	0/0:17,0:16:41.61:0,42,949	0/0:13,0:12:27.09:0,27,638	0/0:14,0:14:33.10:0,33,669	1/1:10,0:9:6.20:86,6,0	./.	./.	0/0:13,0:13:39.12:0,39,828	0/0:19,0:17:42.03:0,42,682	1/1:7,0:6:5.96:35,6,0	0/1:13,0:13:99:119,0,144	0/1:19,0:19:94.66:252,0,95	0/1:14,0:12:6.06:58,0,6	1/1:12,0:10:2.72:24,3,0	0/1:16,0:16:24.73:104,0,25	1/1:12,0:11:5.98:48,6,0	1/1:11,0:10:6.01:99,6,0	0/0:23,0:23:64.92:0,65,1232	0/1:19,0:19:55.64:56,0,108	0/0:16,0:12:36.12:0,36,791
chr10	102844661	.	T	TACACACAC	3097.14	PASS	AB=1.000;AC=27;AF=0.540;AN=50;BaseQRankSum=1.068;DP=430;FS=5.367;HRun=0;HaplotypeScore=111.4634;InbreedingCoeff=0.5886;MQ=61.86;MQ0=14;MQRankSum=-4.670;QD=11.82;ReadPosRankSum=-4.042;VQSLOD=0.3818;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:17:0:0,0,0	./.	0/0:23,0:14:15.04:0,15,271	0/1:24,0:18:4.23:4,0,187	0/0:11,0:11:18.06:0,18,436	0/0:13,0:12:0.47:0,0,1	0/1:17,0:12:0:0,0,0	1/1:40,0:40:65.68:907,66,0	1/1:11,0:11:2.42:37,2,0	0/1:20,0:19:6.31:6,0,830	0/0:13,0:12:27.09:0,27,696	0/0:15,0:15:27.06:0,27,513	1/1:8,0:7:2.70:68,3,0	./.	./.	0/0:13,0:13:30.09:0,30,725	0/0:19,0:17:40.85:0,41,436	1/1:6,0:5:6.46:63,6,0	1/1:13,0:13:23.95:468,24,0	1/1:19,0:19:39.13:1096,39,0	1/1:13,0:11:9.03:240,9,0	0/1:11,0:9:0:0,0,0	1/1:15,0:15:3.01:55,3,0	1/1:12,0:11:2.99:23,3,0	1/1:11,0:10:3.01:99,3,0	0/0:22,0:22:42.37:0,42,959	1/1:3,15:22:6.02:192,6,0	0/0:16,0:12:30.10:0,30,771
chr10	102844677	.	CAG	C	315.16	PASS	AB=1.000;AC=17;AF=0.386;AN=44;BaseQRankSum=-3.007;DP=397;FS=19.687;HRun=0;HaplotypeScore=82.6486;InbreedingCoeff=0.2173;MQ=44.89;MQ0=16;MQRankSum=2.350;QD=1.68;ReadPosRankSum=1.278;VQSLOD=0.1953;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:8,0:7:3.01:0,3,33	./.	./.	1/1:9,2:11:3:32,3,0	0/0:12,0:11:2.68:0,3,16	0/1:19,0:14:13.98:18,0,14	0/0:30,0:30:0.89:0,1,2	0/0:10,0:10:5.94:0,6,42	1/1:21,0:20:11.36:86,11,0	0/1:18,0:17:5.98:18,0,6	1/1:14,0:14:11.61:67,12,0	0/0:8,0:7:2.88:0,3,15	./.	0/0:10,0:10:2.99:0,3,24	./.	1/1:20,1:19:5.49:87,5,0	0/0:9,0:7:3.69:0,4,14	0/0:13,0:12:2.97:0,3,20	0/0:18,0:18:4.05:0,4,23	0/1:18,0:15:18.22:18,0,18	0/1:11,0:9:0:0,0,0	0/0:11,0:11:2.98:0,3,22	0/0:13,0:12:2.99:0,3,24	./.	1/1:18,1:19:11:90,11,0	0/1:20,0:20:14.81:15,0,29	1/1:16,0:12:2.88:15,3,0
chr10	102844737	.	TAGG	T	5809.05	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=9.577;DP=394;FS=0.445;HRun=0;HaplotypeScore=74.2425;InbreedingCoeff=0.8857;MQ=78.18;MQ0=4;MQRankSum=-10.218;QD=26.29;ReadPosRankSum=-0.348;VQSLOD=4.2408;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:18:48.16:779,48,0	1/1:0,8:8:24.08:392,24,0	0/1:38,0:27:5.40:5,0,1061	0/1:42,0:22:1.08:1,0,992	0/0:15,0:15:36.09:0,36,803	1/1:1,12:13:30.10:490,30,0	1/1:3,0:3:6:64,6,0	0/0:20,0:20:60.21:0,60,1296	1/1:0,13:13:39.13:635,39,0	0/0:20,0:20:60.21:0,60,1320	0/0:12,0:12:30.10:0,30,669	0/0:11,0:11:30.10:0,30,670	1/1:0,10:10:30.10:489,30,0	1/1:0,7:7:21.07:340,21,0	1/1:2,10:12:33.11:535,33,0	0/0:11,0:11:33.11:0,33,734	0/0:20,0:20:57.19:0,57,1234	1/1:1,6:7:18.06:294,18,0	0/0:9,0:9:24.08:0,24,514	0/0:12,0:12:33.11:0,33,737	0/0:8,0:8:21.07:0,21,469	1/1:3,11:14:29.86:460,30,0	1/1:2,10:12:27.56:442,28,0	1/1:1,9:10:21.07:342,21,0	1/1:0,11:11:33.11:539,33,0	0/0:13,0:13:36.12:0,36,797	0/0:14,0:14:30.10:0,30,658	0/0:8,0:8:24.08:0,24,536
chr10	102844838	.	GA	G	4962.75	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=13.526;DP=461;FS=11.758;HRun=6;HaplotypeScore=49.0569;InbreedingCoeff=0.9945;MQ=72.17;MQ0=0;MQRankSum=-1.543;QD=28.52;ReadPosRankSum=4.594;VQSLOD=4.4363;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:81.20:870,81,0	1/1:0,7:7:21.05:226,21,0	0/0:11,0:11:30.09:0,30,382	0/0:11,0:11:33.07:0,33,416	0/0:24,0:24:69.22:0,69,908	1/1:0,19:19:51.13:548,51,0	1/1:0,10:10:27.07:290,27,0	0/0:29,0:29:84.26:0,84,1080	1/1:2,9:11:27.07:290,27,0	0/0:21,0:21:54.18:0,54,709	0/0:15,0:15:39.13:0,39,513	0/0:19,0:19:48.15:0,48,617	1/1:1,13:14:36.09:387,36,0	1/1:1,6:7:12.03:129,12,0	1/1:0,11:11:33.08:353,33,0	0/0:24,0:24:69.22:0,69,908	0/0:19,0:19:48.16:0,48,631	1/1:1,15:16:39.10:419,39,0	0/0:16,0:16:48.16:0,48,632	0/0:18,0:18:48.11:0,48,611	0/0:12,0:12:36.12:0,36,472	1/1:1,14:15:39.10:419,39,0	1/1:0,12:12:33.08:355,33,0	1/1:0,10:10:27.07:290,27,0	1/1:2,12:14:36.09:387,36,0	0/0:24,0:24:72.22:0,72,929	0/0:31,0:31:90.28:0,90,1166	0/0:13,0:13:33.10:0,33,420
chr10	102845738	.	TTTG	T	951.48	PASS	AB=0.972;AC=18;AF=0.321;AN=56;BaseQRankSum=11.618;DP=543;FS=55.416;HRun=0;HaplotypeScore=129.8517;InbreedingCoeff=-0.3045;MQ=48.49;MQ0=6;MQRankSum=3.043;QD=2.69;ReadPosRankSum=8.026;VQSLOD=-0.4633;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:31:99:110,0,147	0/0:12,0:12:22.04:0,22,140	0/0:16,0:7:17.86:0,18,171	0/0:9,0:5:5.40:0,5,41	0/0:23,0:23:32.87:0,33,383	0/1:19,0:19:4.32:4,0,134	0/1:23,0:23:66.11:99,0,66	0/1:25,2:27:58.85:59,0,203	0/1:20,0:20:33:33,0,139	0/0:19,0:19:22.60:0,23,360	0/0:20,0:20:53.48:0,53,469	0/0:19,0:20:38.58:0,39,368	0/1:20,0:20:74.82:75,0,139	0/1:22,1:24:99:162,0,112	0/1:20,0:19:31.71:80,0,32	0/0:18,0:18:45.64:0,46,538	0/0:18,0:18:41.22:0,41,396	0/1:15,0:15:35.08:35,0,56	0/1:16,0:17:26.34:26,0,135	0/1:25,3:28:99:101,0,184	1/1:8,1:9:11.77:98,12,0	0/1:13,0:13:35.34:35,0,46	0/1:22,0:22:72.75:73,0,81	0/1:18,1:17:20.28:41,0,20	0/1:25,0:25:77.84:78,0,135	0/0:18,1:19:11.54:0,12,340	0/1:17,0:17:3.34:3,0,158	0/0:15,0:14:38.62:0,39,382
chr10	102846759	.	GGAGAGAGAGAGAGA	G	126.29	PASS	AB=1.000;AC=3;AF=0.056;AN=54;BaseQRankSum=2.874;DP=486;FS=4.969;HRun=0;HaplotypeScore=180.8221;InbreedingCoeff=0.2691;MQ=73.99;MQ0=4;MQRankSum=-2.550;QD=2.87;ReadPosRankSum=-0.967;VQSLOD=2.4389;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:11.94:0,12,378	0/0:11,0:11:8.72:0,9,59	0/0:31,0:24:3.01:0,3,62	./.	0/0:17,0:17:3.01:0,3,137	0/0:16,0:16:15.01:0,15,246	0/0:31,0:31:35.86:0,36,550	0/0:31,0:31:29.22:0,29,648	0/0:12,0:12:17.76:0,18,219	0/0:14,0:13:9.03:0,9,261	0/0:14,0:14:12.04:0,12,303	0/0:8,0:8:12.04:0,12,295	0/0:8,0:8:12.04:0,12,207	0/0:16,0:16:24.08:0,24,438	0/0:12,0:12:6.01:0,6,79	0/0:11,0:16:27.02:0,27,418	1/1:14,10:25:6.02:205,6,0	0/0:17,0:17:18:0,18,291	0/0:15,0:15:13.29:0,13,446	0/0:15,0:15:15.51:0,16,350	0/0:17,0:17:17.56:0,18,559	0/1:19,0:19:9.58:10,0,206	0/0:16,0:16:9.02:0,9,148	0/0:18,0:17:12.04:0,12,214	0/0:11,0:11:6:0,6,51	0/0:15,0:15:9.02:0,9,192	0/0:16,0:16:24.08:0,24,801	0/0:10,0:10:9.03:0,9,242
chr10	102847164	.	A	AG	12403.31	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-16.597;DP=823;FS=2.694;HRun=5;HaplotypeScore=84.0874;InbreedingCoeff=0.9999;MQ=69.77;MQ0=3;MQRankSum=-1.338;QD=32.90;ReadPosRankSum=4.460;VQSLOD=5.0902;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,40:42:89.02:1435,89,0	1/1:2,10:12:33.08:414,33,0	0/0:38,0:25:67.93:0,68,681	0/0:51,0:42:87.96:0,88,958	0/0:18,0:18:54.12:0,54,572	1/1:1,28:29:78.25:1026,78,0	1/1:3,33:36:87.28:1144,87,0	0/0:31,0:30:51.24:0,51,567	1/1:3,25:28:69.22:895,69,0	0/0:34,0:34:84.20:0,84,897	0/0:11,0:11:33.08:0,33,355	0/0:26,0:26:72.16:0,72,765	1/1:2,16:18:42.14:553,42,0	1/1:0,28:28:78.25:1026,78,0	1/1:1,30:31:81.26:1065,81,0	0/0:28,0:28:84.20:0,84,895	0/0:30,0:30:78.17:0,78,828	1/1:2,30:32:81.26:1066,81,0	0/0:25,0:25:57.05:0,57,596	0/0:22,0:22:63.14:0,63,668	0/0:48,0:48:99:0,138,1465	1/1:4,33:37:90.29:1182,90,0	1/1:6,16:22:43.71:624,44,0	1/1:5,35:40:99:1342,102,0	1/1:2,20:22:48.16:631,48,0	0/0:39,0:39:93.23:0,93,1000	0/0:31,0:31:87.22:0,87,935	0/0:13,0:13:39.10:0,39,419
chr10	102847790	.	TAC	T	482.30	PASS	AB=0.937;AC=25;AF=0.500;AN=50;BaseQRankSum=6.803;DP=548;FS=12.065;HRun=0;HaplotypeScore=96.7391;InbreedingCoeff=-0.1388;MQ=66.94;MQ0=13;MQRankSum=-2.243;QD=1.37;ReadPosRankSum=-1.429;VQSLOD=0.6680;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:5.53:0,6,236	1/1:8,0:8:5.64:32,6,0	./.	./.	0/1:7,3:10:14.69:15,0,145	0/0:12,0:13:12.01:0,12,132	0/0:20,0:20:7.46:0,7,204	0/1:15,0:22:0:0,0,0	0/1:17,0:17:28.06:35,0,28	0/1:19,3:22:32.42:32,0,140	0/1:14,1:15:28.06:28,0,239	0/1:14,1:16:71.28:71,0,98	0/1:7,0:7:8.37:8,0,36	1/1:17,0:17:0.72:25,1,0	0/1:18,0:18:32.30:32,0,40	0/0:12,0:12:6.02:0,6,85	1/1:24,0:27:2.84:14,3,0	0/1:23,0:21:58.38:58,0,92	1/1:15,0:13:8.48:41,8,0	1/1:23,0:24:14.20:70,14,0	./.	0/0:9,0:9:5.99:0,6,48	0/1:18,0:18:19.39:19,0,32	0/1:35,0:35:31.59:32,0,136	0/1:12,0:12:9.07:9,0,18	0/1:26,1:27:18.68:19,0,366	1/1:19,0:19:19.54:93,20,0	0/0:7,0:6:6.02:0,6,89
chr10	102847822	.	CACACACACACACAG	C	3533.74	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=2.931;DP=645;FS=7.386;HRun=0;HaplotypeScore=220.0431;InbreedingCoeff=0.2793;MQ=53.01;MQ0=24;MQRankSum=-3.686;QD=11.70;ReadPosRankSum=-3.761;VQSLOD=1.1979;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:47,0:47:6.98:7,0,3519	0/1:5,0:5:10.46:10,0,261	0/0:30,0:8:23.98:0,24,301	0/0:38,0:11:30.52:0,31,388	0/0:19,0:18:42.07:0,42,1532	0/1:18,0:18:11.72:12,0,1229	0/1:25,0:23:99:177,0,1480	1/1:24,0:23:59.63:663,60,0	0/0:20,0:20:14.44:0,14,688	0/0:32,0:31:92.93:0,93,3594	0/0:21,0:21:54.13:0,54,2287	0/0:25,0:25:61.97:0,62,2359	0/1:12,0:12:15.10:15,0,899	0/1:17,0:17:14.76:15,0,871	0/0:19,0:19:18.06:0,18,862	0/0:18,0:18:54:0,54,1319	0/1:23,0:23:99:238,0,196	0/1:27,0:25:55.70:56,0,2201	1/1:2,11:12:35.96:599,36,0	1/1:8,20:28:15.99:604,16,0	1/1:19,0:19:24.44:199,24,0	0/0:18,0:18:3.85:0,4,328	0/0:19,0:19:14.41:0,14,721	0/0:39,0:38:38.91:0,39,1987	0/1:15,0:15:17.19:17,0,749	0/0:38,0:38:99:0,104,4305	1/1:4,25:29:21.15:922,21,0	0/0:7,0:6:18.01:0,18,696
chr10	102847834	.	CAGAG	C	5172.78	PASS	AB=0.887;AC=30;AF=0.536;AN=56;BaseQRankSum=4.228;DP=663;FS=4.318;HRun=0;HaplotypeScore=136.2002;InbreedingCoeff=0.6679;MQ=63.71;MQ0=17;MQRankSum=-2.447;QD=13.47;ReadPosRankSum=3.391;VQSLOD=4.5358;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:47,0:48:68.55:1018,69,0	1/1:1,0:7:8.68:59,9,0	0/0:32,0:13:39.13:0,39,730	0/0:35,0:17:48.12:0,48,822	0/0:22,0:21:45.15:0,45,808	0/1:21,0:21:67.91:303,0,68	0/1:25,0:24:46.19:620,0,46	0/0:29,0:29:11:0,11,39	1/1:3,0:21:7.02:51,7,0	0/0:30,0:29:87.18:0,87,1669	0/0:21,0:21:54.17:0,54,1058	0/0:26,0:26:52.70:0,53,1120	1/1:11,2:15:8.20:414,8,0	1/1:17,1:20:41.85:615,42,0	1/1:2,13:18:11.89:114,12,0	0/0:18,0:18:54.18:0,54,951	0/0:24,0:24:40.94:0,41,571	1/1:24,3:31:65.56:1063,66,0	1/1:13,0:12:8.61:58,9,0	1/1:25,0:25:14.88:106,15,0	0/1:18,0:18:0.62:1,0,1	1/1:6,13:19:0.03:0,0,0	1/1:3,0:20:5.51:42,6,0	0/1:12,26:40:19.58:109,0,20	1/1:13,0:13:29.95:461,30,0	0/0:36,0:36:93.70:0,94,1885	1/1:27,0:27:20.47:138,20,0	0/0:6,0:5:15.05:0,15,293
chr10	102848219	.	C	CA	23344.69	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-15.978;DP=785;FS=7.709;HRun=1;HaplotypeScore=68.9332;InbreedingCoeff=1.0000;MQ=85.88;MQ0=0;MQRankSum=-2.996;QD=41.76;ReadPosRankSum=2.211;VQSLOD=5.2712;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,56:57:99:2293,154,0	1/1:0,15:15:39.13:578,39,0	0/0:33,0:33:99:0,99,1218	0/0:16,0:16:42.14:0,42,543	0/0:23,0:23:66.21:0,66,857	1/1:1,17:18:48.16:719,48,0	1/1:1,35:36:99:1484,99,0	1/1:2,22:25:66.22:989,66,0	1/1:0,15:15:45.15:675,45,0	0/0:33,0:33:96.30:0,96,1233	0/0:21,0:21:63.17:0,63,777	0/0:27,0:27:78.24:0,78,998	1/1:0,26:26:75.25:1124,75,0	1/1:0,29:29:78.26:1169,78,0	1/1:0,25:26:78.26:1151,78,0	0/0:21,0:21:63.20:0,63,817	1/1:1,45:46:99:2024,135,0	1/1:1,33:34:90.30:1349,90,0	1/1:1,24:25:75.23:1097,75,0	1/1:0,34:34:99:1480,99,0	1/1:0,42:42:99:1709,114,0	1/1:0,27:27:75.21:1099,75,0	1/1:1,21:22:60.20:899,60,0	1/1:0,36:35:99:1574,105,0	1/1:0,20:20:60.20:899,60,0	0/0:39,0:39:99:0,111,1417	1/1:0,26:26:69.23:1033,69,0	0/0:13,0:13:36.09:0,36,450
chr10	102851659	.	A	ATGTGTG	2027.55	PASS	AB=0.804;AC=24;AF=0.462;AN=52;BaseQRankSum=4.577;DP=735;FS=15.239;HRun=0;HaplotypeScore=160.1484;InbreedingCoeff=0.4398;MQ=64.51;MQ0=13;MQRankSum=0.491;QD=5.16;ReadPosRankSum=-0.069;VQSLOD=1.7367;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:43:15.04:193,15,0	1/1:2,0:8:7.86:114,8,0	./.	./.	0/0:18,0:18:26.99:0,27,464	1/1:10,0:23:12.04:154,12,0	1/1:16,0:39:10.72:164,11,0	0/0:35,0:35:6.44:0,6,106	0/1:27,0:29:40.93:174,0,41	0/0:30,0:32:9.78:0,10,444	0/0:23,0:23:30.06:0,30,497	0/0:23,0:22:27.05:0,27,451	1/1:12,0:19:8.62:114,9,0	0/1:10,0:20:50.68:54,0,51	1/1:10,13:25:11.06:278,11,0	0/0:31,0:30:42.13:0,42,820	0/1:28,0:29:6.16:6,0,722	1/1:10,0:26:13:189,13,0	0/0:14,0:14:2.63:0,3,75	0/0:29,0:29:30.55:0,31,550	0/0:27,0:26:36.07:0,36,637	0/1:15,0:28:17.06:68,0,17	0/1:6,0:23:15.75:176,0,16	1/1:12,0:34:24.08:306,24,0	1/1:10,0:29:6.08:180,6,0	0/0:25,0:29:10.57:0,11,391	0/0:28,0:27:47.33:0,47,852	0/1:13,0:13:46.47:46,0,237
chr10	102854284	.	A	ACAT	30598.71	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=18.555;DP=827;FS=0.905;HRun=0;HaplotypeScore=132.4219;InbreedingCoeff=0.9996;MQ=85.97;MQ0=0;MQRankSum=-8.586;QD=54.45;ReadPosRankSum=4.023;VQSLOD=6.9136;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,39:43:96.33:2249,96,0	1/1:1,9:11:30.10:690,30,0	0/0:35,0:35:90.28:0,90,1441	0/0:34,0:34:89.63:0,90,1396	0/0:40,0:40:99:0,117,2001	1/1:2,32:35:81.28:1834,81,0	1/1:3,19:23:60.21:1393,60,0	1/1:4,30:34:99:2240,99,0	1/1:3,27:30:69.24:1570,69,0	0/0:30,0:30:87.28:0,87,1505	0/0:25,0:25:72.23:0,72,1227	0/0:19,0:19:57.18:0,57,968	1/1:2,24:28:66.23:1506,66,0	1/1:3,31:35:78.27:1781,78,0	1/1:3,27:33:81.28:1845,81,0	0/0:29,0:29:87.28:0,87,1481	1/1:2,21:23:51.18:1204,51,0	1/1:2,19:21:48.16:1082,48,0	1/1:4,22:26:78.16:1594,78,0	1/1:3,23:29:69.24:1586,69,0	1/1:1,41:43:99:2545,111,0	1/1:3,28:32:72.25:1646,72,0	1/1:4,28:32:63.22:1465,63,0	1/1:3,23:27:57.20:1282,57,0	1/1:2,29:32:72.25:1684,72,0	0/0:44,0:44:99:0,123,2061	1/1:3,22:25:60.21:1403,60,0	0/0:9,0:9:24.06:0,24,370
chr10	102855640	.	TATATAC	T	173.57	PASS	AC=2;AF=0.045;AN=44;BaseQRankSum=-0.314;DP=432;FS=4.900;HRun=0;HaplotypeScore=116.5242;InbreedingCoeff=0.2824;MQ=61.22;MQ0=13;MQRankSum=0.203;QD=9.14;ReadPosRankSum=-2.309;VQSLOD=1.9837;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:23.85:0,24,590	0/0:7,0:5:3.01:0,3,74	./.	./.	0/0:20,0:20:9.01:0,9,214	0/0:19,0:18:5.79:0,6,143	./.	./.	0/0:9,0:9:12.04:0,12,296	0/0:25,0:25:15.05:0,15,418	0/0:15,0:15:12.01:0,12,240	0/0:12,0:12:12.04:0,12,359	0/0:10,0:10:3.18:0,3,143	0/0:14,0:13:9.03:0,9,222	0/0:19,0:19:3.01:0,3,66	0/0:11,0:11:6.02:0,6,169	0/0:13,0:13:12.04:0,12,270	0/0:21,0:17:14.68:0,15,243	0/0:14,0:13:8.39:0,8,156	0/0:23,0:23:18.03:0,18,315	./.	0/0:5,0:5:3.01:0,3,74	0/0:11,0:11:2.76:0,3,25	0/0:4,0:4:2.74:0,3,12	0/0:26,0:25:14.33:0,14,306	1/1:14,5:19:15.03:259,15,0	0/0:19,0:19:4.26:0,4,53	./.
chr10	102855669	.	A	ACAT	2868.26	PASS	AC=24;AF=0.444;AN=54;BaseQRankSum=-1.057;DP=407;FS=1.426;HRun=0;HaplotypeScore=80.9507;InbreedingCoeff=0.8209;MQ=46.19;MQ0=58;MQRankSum=1.623;QD=21.57;ReadPosRankSum=5.827;VQSLOD=2.9224;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,18:23:23.63:544,24,0	1/1:2,3:3:9.03:171,9,0	./.	0/0:9,0:2:0.44:0,0,1	0/0:10,0:10:27.08:0,27,420	1/1:7,8:14:5.57:136,6,0	1/1:4,0:4:6.02:111,6,0	0/0:102,0:25:63.18:0,63,938	1/1:2,6:8:12.04:272,12,0	0/0:16,0:16:42.13:0,42,676	0/0:12,0:12:36.11:0,36,575	0/0:10,0:10:24.07:0,24,370	1/1:2,6:8:5.59:136,6,0	1/1:4,10:13:9.03:204,9,0	0/0:12,0:12:27.09:0,27,448	0/0:7,0:7:21.07:0,21,350	0/0:14,0:14:21.44:0,21,495	1/1:14,6:16:36.12:695,36,0	0/0:15,0:9:27.09:0,27,443	0/0:14,0:14:42.13:0,42,654	0/0:5,0:5:12.02:0,12,174	1/1:1,2:3:3.01:68,3,0	1/1:5,2:7:2.56:67,3,0	1/1:2,0:2:3.01:56,3,0	1/1:15,8:22:29.96:606,30,0	0/0:17,0:17:51.15:0,51,756	0/0:12,0:12:18.06:0,18,297	0/0:15,0:14:39.13:0,39,632
chr10	102855672	.	TATA	T	547.14	PASS	AB=0.852;AC=10;AF=0.185;AN=54;BaseQRankSum=3.822;DP=411;FS=0.975;HRun=0;HaplotypeScore=92.0096;InbreedingCoeff=0.3474;MQ=47.19;MQ0=60;MQRankSum=-0.903;QD=7.60;ReadPosRankSum=0.156;VQSLOD=2.9240;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,2:23:26.62:0,27,259	0/1:5,1:4:20.61:94,0,21	./.	0/1:12,0:3:0.03:0,0,0	0/0:9,0:9:27.08:0,27,508	0/0:15,0:14:3.22:0,3,30	1/1:0,3:3:6.02:111,6,0	0/0:105,0:28:84.27:0,84,1260	0/0:8,0:8:11.94:0,12,105	0/0:16,0:16:48.16:0,48,905	0/0:12,0:12:36.11:0,36,656	0/0:8,0:8:24.07:0,24,483	0/0:8,0:8:3.59:0,4,48	0/0:12,0:11:9.02:0,9,89	0/0:11,0:11:27.09:0,27,466	0/0:7,0:7:21.07:0,21,394	0/0:14,0:14:36.10:0,36,637	0/1:12,6:14:68.31:68,0,340	0/0:18,0:10:30.10:0,30,528	0/0:15,0:15:42.14:0,42,829	0/0:5,0:5:12.02:0,12,174	0/0:3,0:3:3.01:0,3,30	1/1:2,5:7:3.01:43,3,0	1/1:0,2:2:3.01:56,3,0	0/1:13,6:23:63.34:306,0,63	0/0:17,0:17:13.57:0,14,562	0/0:11,0:11:18.06:0,18,322	0/0:14,0:13:39.13:0,39,640
chr10	102855718	.	TATA	T	552.66	PASS	AB=0.517;AC=15;AF=0.313;AN=48;BaseQRankSum=5.611;DP=274;FS=0.000;HRun=0;HaplotypeScore=85.8122;InbreedingCoeff=0.6621;MQ=61.16;MQ0=3;MQRankSum=-4.596;QD=6.66;ReadPosRankSum=-0.359;VQSLOD=2.4716;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,9:12:2.83:50,3,0	./.	0/0:10,0:4:9.03:0,9,171	0/0:25,0:9:5.42:0,5,67	0/0:6,0:6:18.06:0,18,316	0/1:2,14:16:0.10:0,0,0	1/1:0,1:1:3.01:50,3,0	0/0:44,0:44:99:0,120,2325	1/1:1,5:6:3.01:50,3,0	0/0:12,0:12:36.12:0,36,773	0/0:6,0:6:18.06:0,18,382	0/0:7,0:7:21.07:0,21,448	1/1:0,5:5:3.43:20,3,0	1/1:4,5:9:6:52,6,0	0/0:5,0:5:9.03:0,9,204	0/0:4,0:4:12.04:0,12,272	0/0:18,0:18:51.17:0,51,1102	1/1:3,12:15:30.06:469,30,0	0/0:12,0:11:33.11:0,33,748	0/0:2,0:2:5.99:0,6,89	./.	./.	0/1:0,4:4:0:0,0,0	./.	0/1:1,14:15:0.05:0,0,0	0/0:13,0:13:39.13:0,39,821	0/0:9,0:9:9.03:0,9,204	0/0:12,0:12:36.12:0,36,813
chr10	102855750	.	AAT	A	1757.45	PASS	AC=24;AF=0.444;AN=54;BaseQRankSum=4.727;DP=263;FS=1.329;HRun=0;HaplotypeScore=59.7866;InbreedingCoeff=0.8046;MQ=69.29;MQ0=1;MQRankSum=-4.477;QD=21.70;ReadPosRankSum=-0.591;VQSLOD=3.6514;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,7:10:18.06:229,18,0	1/1:0,4:4:6.02:76,6,0	0/0:3,0:4:6.01:0,6,74	0/0:12,0:7:5.99:0,6,65	0/0:10,0:10:27.09:0,27,448	1/1:2,11:13:21.07:267,21,0	1/1:1,2:3:9.01:100,9,0	0/0:8,0:35:64.72:0,65,565	1/1:1,2:3:6.02:76,6,0	0/0:12,0:12:36.12:0,36,601	0/0:8,0:8:18.06:0,18,301	0/0:5,0:5:15.05:0,15,248	1/1:2,2:4:6.02:76,6,0	1/1:1,3:4:6.02:76,6,0	0/0:2,0:5:9:0,9,79	0/0:7,0:7:21.06:0,21,327	0/0:22,0:22:63.21:0,63,1043	1/1:2,12:14:27.09:344,27,0	0/0:4,0:18:39.43:0,39,376	0/0:0,0:6:7.82:0,8,59	./.	1/1:2,1:3:6.01:64,6,0	1/1:0,3:3:5.89:76,6,0	1/1:0,1:1:3.01:38,3,0	1/1:2,16:18:42.13:534,42,0	0/0:13,0:13:36.10:0,36,533	0/0:0,0:4:6:0,6,53	0/0:20,0:20:51.17:0,51,853
chr10	102856221	.	TTCTTCCTCCTCCTTC	T	8432.32	PASS	AB=0.681;AC=22;AF=0.393;AN=56;BaseQRankSum=11.227;DP=552;FS=103.118;HRun=0;HaplotypeScore=208.2320;InbreedingCoeff=0.8099;MQ=52.75;MQ0=9;MQRankSum=-10.620;QD=55.11;ReadPosRankSum=-0.131;VQSLOD=1.3502;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,11:17:18.06:638,18,0	1/1:1,4:5:8.81:314,9,0	0/0:37,0:20:37.31:0,37,918	0/0:57,0:20:5.32:0,5,823	0/0:20,0:20:52.33:0,52,2768	1/1:3,11:14:21.07:800,21,0	1/1:4,14:18:12.59:601,13,0	0/0:36,0:36:75.18:0,75,3112	0/1:10,5:15:9.45:1050,0,9	0/0:23,0:23:63.22:0,63,3565	0/0:19,0:19:57.20:0,57,3322	0/0:22,0:22:63.20:0,63,3754	1/1:3,11:14:39.13:1490,39,0	0/1:4,7:11:99:564,0,202	0/0:14,0:14:33.11:0,33,1939	0/0:17,0:17:42.12:0,42,2309	0/0:13,0:13:36.11:0,36,1760	1/1:3,8:12:10.59:331,11,0	0/0:27,0:24:36.12:0,36,1543	0/0:19,0:19:45.15:0,45,2649	0/0:31,0:31:70.81:0,71,3892	1/1:2,7:9:9.03:389,9,0	1/1:5,7:12:24.08:867,24,0	1/1:4,9:12:21.07:747,21,0	1/1:5,7:12:18.06:643,18,0	0/0:21,0:21:48.16:0,48,2859	0/0:26,0:26:66.23:0,66,3938	0/0:15,0:15:42.11:0,42,2106
chr10	102856231	.	TCCTTC	T	1963.53	PASS	AB=0.952;AC=22;AF=0.393;AN=56;BaseQRankSum=12.879;DP=532;FS=59.181;HRun=0;HaplotypeScore=140.2484;InbreedingCoeff=0.6783;MQ=53.05;MQ0=9;MQRankSum=-10.570;QD=10.67;ReadPosRankSum=2.020;VQSLOD=0.6325;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,1:15:0.08:149,0,0	1/1:8,0:8:11.50:78,11,0	0/1:43,0:16:20.99:21,0,760	0/0:72,0:26:16.50:0,17,793	0/0:18,0:18:52.30:0,52,1411	1/1:13,0:13:12.93:161,13,0	1/1:17,0:17:1.53:131,2,0	0/0:32,0:32:90.21:0,90,2464	0/1:11,2:13:87.06:267,0,87	0/0:23,0:23:69.24:0,69,2055	0/0:19,0:19:57.20:0,57,1844	0/0:22,0:22:65.02:0,65,1981	1/1:12,2:14:38.96:396,39,0	0/1:9,0:9:94.13:114,0,94	0/0:13,0:13:39.13:0,39,1136	0/0:13,0:13:39.13:0,39,1276	0/0:13,0:13:36.05:0,36,981	1/1:10,0:11:10.85:139,11,0	0/0:17,0:15:45.13:0,45,1167	0/0:16,0:16:45.15:0,45,1383	0/0:28,0:28:78.71:0,79,2359	1/1:7,0:7:9.03:107,9,0	1/1:11,0:11:23.96:244,24,0	1/1:11,1:11:18.42:189,18,0	1/1:9,1:10:15.49:170,15,0	0/0:21,0:21:60.19:0,60,1719	0/0:24,0:24:66.23:0,66,2186	0/0:14,0:14:42.12:0,42,1199
chr10	102856273	.	CCT	C	80.02	PASS	AB=0.906;AC=8;AF=0.143;AN=56;BaseQRankSum=5.266;DP=457;FS=8.221;HRun=0;HaplotypeScore=147.2582;InbreedingCoeff=-0.1361;MQ=52.94;MQ0=14;MQRankSum=-3.220;QD=0.74;ReadPosRankSum=-3.356;VQSLOD=1.2498;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:18.06:0,18,337	0/1:10,1:11:18.87:19,0,459	0/0:47,0:12:19.87:0,20,359	0/0:61,0:26:21.16:0,21,703	0/0:21,0:21:60.19:0,60,1144	0/0:10,0:10:27.09:0,27,523	0/0:14,0:13:26.62:0,27,429	0/1:16,1:16:11.71:12,0,670	0/0:13,0:13:36.12:0,36,697	0/0:24,0:24:72.24:0,72,1388	0/0:19,0:19:57.20:0,57,1138	0/0:17,0:17:51.17:0,51,1017	0/0:13,0:13:39.13:0,39,781	0/0:4,0:4:8.96:0,9,138	0/0:12,0:12:36.11:0,36,677	0/0:17,0:17:48.16:0,48,963	0/1:7,0:7:7.88:8,0,10	0/0:7,0:7:14.94:0,15,259	0/0:13,0:12:30.10:0,30,586	0/1:16,1:17:12.04:12,0,672	0/0:12,0:12:32.14:0,32,588	0/1:9,1:10:15.19:15,0,313	0/1:11,2:12:43.58:44,0,453	0/0:6,0:6:15.05:0,15,278	0/1:8,4:12:93.07:93,0,392	0/0:15,0:15:45.15:0,45,856	0/1:19,2:21:6.01:6,0,930	0/0:8,0:8:24.08:0,24,487
chr10	102856290	.	CCT	C	501.56	PASS	AB=0.917;AC=14;AF=0.250;AN=56;BaseQRankSum=6.959;DP=352;FS=6.498;HRun=0;HaplotypeScore=124.4425;InbreedingCoeff=-0.1922;MQ=43.66;MQ0=14;MQRankSum=-4.058;QD=3.61;ReadPosRankSum=-4.862;VQSLOD=0.3791;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:8.79:0,9,52	0/1:9,1:10:34.78:35,0,98	0/0:30,0:9:18.02:0,18,320	0/0:32,0:10:11.05:0,11,374	0/0:17,0:17:51.09:0,51,981	0/0:6,0:6:5.64:0,6,58	0/1:9,0:8:19.37:19,0,46	0/1:12,2:13:35.10:104,0,35	0/1:9,1:10:45.27:45,0,100	0/0:22,0:22:66.23:0,66,1334	0/0:17,0:17:51.18:0,51,1030	0/0:14,0:14:39.13:0,39,767	0/1:12,0:12:4.38:4,0,62	0/0:4,0:4:8.88:0,9,96	0/0:9,0:9:27.09:0,27,530	0/0:17,0:17:51.18:0,51,1036	1/1:3,0:3:2.88:15,3,0	0/0:5,0:5:8.75:0,9,51	0/0:7,2:9:1.11:0,1,67	0/1:12,1:13:30.83:53,0,31	0/1:11,0:11:1.54:2,0,82	0/1:7,1:8:26.96:27,0,70	0/1:11,2:12:31.56:88,0,32	0/1:4,0:4:0.09:0,0,32	0/1:8,4:12:66.52:136,0,67	0/0:15,0:15:45.15:0,45,874	0/1:16,3:19:99:115,0,110	0/0:9,0:9:27.09:0,27,546
chr10	102856291	.	CTTTCT	C	4462.30	PASS	AB=0.944;AC=33;AF=0.589;AN=56;BaseQRankSum=11.173;DP=354;FS=32.291;HRun=0;HaplotypeScore=128.9664;InbreedingCoeff=0.7580;MQ=43.54;MQ0=14;MQRankSum=-9.627;QD=26.25;ReadPosRankSum=0.550;VQSLOD=2.3230;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,1:5:8.99:79,9,0	1/1:10,0:10:20.57:210,21,0	0/0:27,0:8:21.03:0,21,403	0/0:33,0:11:21.07:0,21,500	0/0:17,0:17:50.75:0,51,1409	1/1:5,1:6:13.85:177,14,0	1/1:8,1:8:16.59:199,17,0	0/1:16,0:14:22.66:268,0,23	1/1:9,1:10:24.78:193,25,0	0/0:22,0:22:66.23:0,66,2014	0/0:17,0:17:51.17:0,51,1497	0/0:14,0:14:42.09:0,42,1115	1/1:9,3:12:29.42:449,29,0	0/1:4,0:4:43.57:44,0,82	0/0:9,0:9:27.08:0,27,772	0/0:17,0:17:51.18:0,51,1567	1/1:3,0:3:3:29,3,0	1/1:5,0:5:9.02:105,9,0	0/1:8,2:9:1.05:301,0,1	1/1:8,5:13:32.48:578,32,0	1/1:11,0:11:24.25:382,24,0	1/1:8,0:8:19.33:151,19,0	1/1:11,2:12:21.03:265,21,0	1/1:4,0:4:12.04:188,12,0	1/1:11,1:12:25.60:259,26,0	0/0:15,0:15:42.14:0,42,1189	1/1:17,2:19:41.39:587,41,0	0/0:9,0:9:27.09:0,27,863
chr10	102856292	.	T	TC	5928.18	PASS	AB=0.655;AC=34;AF=0.607;AN=56;BaseQRankSum=12.688;DP=342;FS=32.268;HRun=2;HaplotypeScore=95.7325;InbreedingCoeff=0.7989;MQ=43.54;MQ0=15;MQRankSum=-10.688;QD=37.28;ReadPosRankSum=0.894;VQSLOD=2.5211;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,4:5:9.03:143,9,0	1/1:1,8:9:24.08:389,24,0	0/0:30,0:8:18.02:0,18,229	0/0:34,0:10:21.05:0,21,274	0/0:16,0:17:51.03:0,51,668	1/1:1,4:5:15.05:238,15,0	1/1:1,6:6:18.06:283,18,0	0/1:11,6:15:39.02:242,0,39	1/1:2,7:9:27.09:420,27,0	0/0:22,0:22:66.22:0,66,919	0/0:17,0:17:51.17:0,51,712	0/0:14,0:14:39.12:0,39,527	1/1:3,7:10:30.10:467,30,0	0/1:1,3:4:32.82:88,0,33	0/0:9,0:9:27.08:0,27,360	0/0:17,0:17:51.17:0,51,713	1/1:1,2:3:3.01:48,3,0	1/1:1,4:5:9.03:143,9,0	1/1:6,5:10:21.56:328,22,0	1/1:6,7:13:36.11:544,36,0	1/1:1,9:10:29.24:396,29,0	1/1:1,6:7:21.07:344,21,0	1/1:4,7:10:27:389,27,0	1/1:0,4:4:12.04:191,12,0	1/1:5,7:12:33.11:562,33,0	0/0:14,0:14:42.13:0,42,573	1/1:5,12:17:45.15:714,45,0	0/0:9,0:9:27.09:0,27,376
chr10	102856307	.	CCT	C	1045.26	PASS	AB=0.929;AC=26;AF=0.464;AN=56;BaseQRankSum=10.336;DP=293;FS=52.933;HRun=0;HaplotypeScore=97.7008;InbreedingCoeff=0.3580;MQ=38.79;MQ0=16;MQRankSum=-8.642;QD=8.23;ReadPosRankSum=0.363;VQSLOD=1.2999;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:5.18:20,5,0	1/1:7,1:8:19.34:160,19,0	0/0:32,0:7:18.06:0,18,360	0/0:27,0:8:24.08:0,24,436	0/0:16,0:15:45.11:0,45,872	0/1:5,0:5:10.65:11,0,12	0/1:6,0:5:22.96:35,0,23	0/1:15,0:13:27.55:28,0,36	1/1:8,1:9:17.98:144,18,0	0/0:19,0:19:57.20:0,57,1153	0/0:14,0:14:39.12:0,39,754	0/0:11,0:11:33.11:0,33,650	1/1:6,0:6:8.83:65,9,0	0/1:5,0:5:3.29:3,0,55	0/0:7,0:7:21.07:0,21,362	0/0:15,0:15:45.15:0,45,894	1/1:3,0:3:2.04:6,2,0	1/1:4,0:4:4.81:29,5,0	0/1:10,1:10:29.52:30,0,200	0/1:9,1:10:5.48:76,0,5	0/0:5,0:5:6.22:0,6,26	1/1:6,1:7:19.64:137,20,0	0/1:10,2:10:41.17:138,0,41	1/1:2,0:2:2.60:10,3,0	1/1:5,4:10:22.99:226,23,0	0/0:11,0:11:33.11:0,33,671	0/1:6,3:9:22.77:118,0,23	0/0:9,0:9:27.08:0,27,511
chr10	102856308	.	CTTTCT	C	2404.90	PASS	AB=0.891;AC=31;AF=0.554;AN=56;BaseQRankSum=11.816;DP=286;FS=72.375;HRun=0;HaplotypeScore=101.9156;InbreedingCoeff=0.5839;MQ=38.75;MQ0=17;MQRankSum=-8.880;QD=18.94;ReadPosRankSum=-1.363;VQSLOD=-0.2235;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:8.98:78,9,0	1/1:6,0:8:17.08:156,17,0	0/0:32,0:7:18.06:0,18,318	0/0:26,0:8:24.07:0,24,471	0/0:16,0:15:42.14:0,42,1100	1/1:4,0:4:7.26:63,7,0	0/1:6,0:5:2.89:89,0,3	1/1:6,10:13:35.24:510,35,0	1/1:6,0:8:18.78:121,19,0	0/0:19,0:19:57.19:0,57,1440	0/0:14,0:14:36.12:0,36,961	0/0:11,0:11:33.10:0,33,795	1/1:3,0:5:11.34:81,11,0	0/1:5,0:5:25.47:25,0,89	0/0:7,0:7:21.02:0,21,310	0/0:15,0:15:45.14:0,45,1189	1/1:3,0:3:3:29,3,0	1/1:2,0:4:7.25:58,7,0	0/1:9,2:10:99:252,0,119	1/1:6,4:10:26.51:498,27,0	0/1:5,0:5:10.39:17,0,10	1/1:7,0:7:19.11:145,19,0	0/1:7,0:9:34.63:118,0,35	1/1:2,0:2:3.89:33,4,0	1/1:9,0:10:17.45:100,17,0	0/0:11,0:11:33.11:0,33,920	1/1:8,0:8:19.04:237,19,0	0/0:8,0:8:24.08:0,24,671
chr10	102856685	.	A	AT	377.95	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=-0.554;DP=376;FS=19.634;HRun=1;HaplotypeScore=54.6374;InbreedingCoeff=0.8907;MQ=50.61;MQ0=13;MQRankSum=-0.235;QD=29.07;ReadPosRankSum=0.309;VQSLOD=2.0372;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:42.14:0,42,544	0/0:4,0:4:9.03:0,9,116	0/0:30,0:9:26.73:0,27,287	0/0:27,0:6:14.98:0,15,193	0/0:14,0:14:33.11:0,33,426	0/0:18,0:16:33.11:0,33,426	0/0:15,0:10:15.05:0,15,194	0/0:14,0:9:24.06:0,24,295	0/0:15,0:13:27.03:0,27,329	0/0:6,0:6:18.06:0,18,233	0/0:8,0:8:21.07:0,21,272	0/0:11,0:10:21.07:0,21,271	0/0:12,0:10:18.06:0,18,233	0/0:15,0:13:33.11:0,33,427	0/0:27,0:25:57.19:0,57,738	0/0:12,0:11:30.10:0,30,388	1/1:0,7:7:18.06:269,18,0	1/1:0,6:6:15.05:224,15,0	0/0:12,0:11:13.91:0,14,370	0/0:9,0:9:27.09:0,27,350	0/0:19,0:19:54.18:0,54,700	0/0:11,0:11:33.11:0,33,427	0/0:8,0:8:11.99:0,12,155	0/0:13,0:13:26.95:0,27,308	0/0:4,0:4:12.04:0,12,155	0/0:18,0:18:51.17:0,51,662	0/0:20,0:17:45.10:0,45,563	./.
chr10	102857009	.	C	CTT	248.04	PASS	AB=0.875;AC=8;AF=0.190;AN=42;BaseQRankSum=4.459;DP=99;FS=0.000;HRun=1;HaplotypeScore=45.6340;InbreedingCoeff=-0.0005;MQ=29.68;MQ0=12;MQRankSum=-0.844;QD=5.77;ReadPosRankSum=1.103;VQSLOD=-0.6245;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:1,0:1:2.98:0,3,22	./.	./.	0/0:9,0:8:3.01:0,3,45	0/0:1,0:1:0:0,0,0	0/0:2,0:2:2.60:0,3,10	0/0:4,0:4:5.70:0,6,32	0/0:2,0:1:2.50:0,2,9	0/0:6,0:5:14.88:0,15,172	0/0:5,0:5:9.02:0,9,119	0/0:5,0:5:14.55:0,15,162	0/0:3,0:3:6:0,6,52	0/0:4,0:3:8.95:0,9,71	./.	0/0:2,0:1:3.01:0,3,48	0/0:1,0:1:1.25:0,1,3	1/1:1,0:1:0.47:1,0,0	./.	0/1:3,2:5:15.34:112,0,15	./.	0/1:12,1:9:23.10:23,0,217	1/1:5,0:4:1.23:6,1,0	0/0:2,0:2:2.62:0,3,26	0/1:10,2:11:48.32:138,0,48	0/0:3,0:1:3.01:0,3,46	0/1:7,0:5:67.11:67,0,68	./.
chr10	102857787	.	A	AG	18598.89	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-17.259;DP=717;FS=0.946;HRun=1;HaplotypeScore=63.9447;InbreedingCoeff=0.9986;MQ=90.74;MQ0=0;MQRankSum=-4.999;QD=38.67;ReadPosRankSum=4.214;VQSLOD=5.4101;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,52:54:99:1880,126,0	1/1:0,9:9:27.09:404,27,0	0/0:26,0:26:72.18:0,72,894	0/0:30,0:30:84.19:0,84,1016	0/0:23,0:23:66.18:0,66,819	1/1:0,22:22:66.22:989,66,0	1/1:1,29:30:69.23:1034,69,0	1/1:0,28:28:84.18:1149,84,0	1/1:1,26:27:69.23:1033,69,0	0/0:35,0:34:99:0,102,1255	0/0:13,0:13:36.12:0,36,464	0/0:25,0:25:75.20:0,75,931	1/1:0,23:23:66.22:988,66,0	1/1:0,23:23:66.22:989,66,0	0/0:36,0:36:99:0,108,1373	0/0:18,0:18:54.17:0,54,688	1/1:0,33:33:78.26:1168,78,0	1/1:0,26:26:69.19:1008,69,0	1/1:0,18:18:51.16:745,51,0	1/1:2,31:33:84.28:1252,84,0	1/1:1,38:39:99:1572,105,0	1/1:0,22:23:63.21:931,63,0	1/1:0,13:13:33.11:494,33,0	1/1:1,25:26:66.22:989,66,0	1/1:0,17:17:42.14:629,42,0	0/0:24,0:24:66.21:0,66,855	1/1:0,37:37:90.30:1345,90,0	0/0:6,0:6:18.06:0,18,233
chr10	102859037	.	GT	G	14519.82	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=18.114;DP=742;FS=16.433;HRun=4;HaplotypeScore=127.0400;InbreedingCoeff=0.9996;MQ=85.49;MQ0=0;MQRankSum=-2.831;QD=30.12;ReadPosRankSum=3.915;VQSLOD=3.1007;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,58:65:99:1795,153,0	1/1:1,8:9:24.07:287,24,0	0/0:33,0:33:83.31:0,83,1102	0/0:27,0:26:50.95:0,51,827	0/0:19,0:19:57.19:0,57,795	1/1:2,13:15:39.04:448,39,0	1/1:0,21:21:48.15:575,48,0	1/1:1,28:29:78.20:919,78,0	1/1:2,28:30:78.24:934,78,0	0/0:26,0:26:72.22:0,72,962	0/0:18,0:18:54.17:0,54,737	0/0:22,1:23:33.96:0,34,869	1/1:1,24:25:65.98:770,66,0	1/1:1,33:34:96.16:1115,96,0	0/0:38,0:38:96.28:0,96,1292	0/0:31,0:31:90.25:0,90,1188	1/1:0,24:24:63.19:754,63,0	1/1:1,17:18:42.13:503,42,0	1/1:1,31:32:93.28:1114,93,0	1/1:4,18:22:54.12:627,54,0	1/1:3,39:42:99:1290,108,0	1/1:0,18:18:48.06:556,48,0	1/1:2,20:22:45.13:535,45,0	1/1:3,25:28:69.21:827,69,0	1/1:1,13:14:36.03:413,36,0	0/0:27,0:27:69.21:0,69,929	1/1:3,31:34:90.17:1060,90,0	0/0:18,0:18:54.18:0,54,752
chr10	102859281	.	GA	G	11943.22	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=12.934;DP=572;FS=0.671;HRun=2;HaplotypeScore=87.6815;InbreedingCoeff=0.9983;MQ=92.10;MQ0=1;MQRankSum=-4.040;QD=32.90;ReadPosRankSum=3.598;VQSLOD=4.9295;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:87.28:1128,87,0	1/1:1,9:10:27.09:349,27,0	0/0:24,0:24:66.20:0,66,921	0/0:31,0:31:84.08:0,84,1106	0/0:19,0:19:51.14:0,51,704	1/1:2,19:20:57.19:739,57,0	1/1:0,21:21:63.20:818,63,0	1/1:1,18:19:54.15:670,54,0	1/1:1,18:19:51.17:662,51,0	0/0:23,0:23:69.23:0,69,1016	0/0:12,0:12:36.12:0,36,532	0/0:30,0:30:90.28:0,90,1301	1/1:1,24:25:69.22:895,69,0	1/1:1,31:32:90.29:1167,90,0	0/0:24,0:24:72.24:0,72,1078	0/0:15,0:15:45.14:0,45,649	1/1:0,26:26:66.21:857,66,0	1/1:0,19:19:48.16:623,48,0	1/1:2,16:18:45.11:553,45,0	1/1:1,9:10:17.99:212,18,0	1/1:1,32:33:84.27:1090,84,0	1/1:2,11:13:27.09:351,27,0	1/1:1,13:14:30.10:389,30,0	1/1:0,18:18:45.15:584,45,0	1/1:0,15:15:33.11:428,33,0	0/0:20,0:20:60.19:0,60,880	1/1:1,14:15:33.11:428,33,0	0/0:11,0:11:33.11:0,33,488
chr10	102859957	.	TGG	T	8680.93	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=6.720;DP=561;FS=6.444;HRun=6;HaplotypeScore=76.9090;InbreedingCoeff=0.6428;MQ=64.59;MQ0=5;MQRankSum=0.407;QD=24.32;ReadPosRankSum=7.003;VQSLOD=2.5807;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,43:45:99:1359,102,0	1/1:0,8:8:18.06:240,18,0	0/0:24,0:17:43.55:0,44,649	0/0:20,0:15:18.78:0,19,599	0/0:20,0:20:54.15:0,54,900	1/1:1,23:24:60.20:800,60,0	1/1:4,30:34:72.23:960,72,0	0/1:16,0:15:16.26:30,0,16	1/1:1,18:19:51.17:680,51,0	0/0:28,0:27:78.25:0,78,1330	0/0:13,0:13:39.13:0,39,671	0/0:26,0:26:69.24:0,69,1235	1/1:2,14:15:33.11:440,33,0	1/1:5,18:22:54.17:709,54,0	0/0:16,0:16:42.14:0,42,721	0/0:11,0:11:27.98:0,28,488	0/0:17,0:15:28.25:0,28,219	1/1:3,21:24:48.16:640,48,0	0/1:19,0:19:31.95:78,0,32	0/1:15,0:15:22.68:74,0,23	0/1:30,0:30:21.60:178,0,22	1/1:1,15:16:36.12:478,36,0	1/1:3,18:21:54.18:720,54,0	1/1:1,20:21:54.18:718,54,0	1/1:2,13:15:39.13:519,39,0	0/0:20,0:20:51.17:0,51,908	0/1:11,0:11:22.75:58,0,23	0/0:9,0:9:24.05:0,24,373
chr10	102859961	.	GGGT	G	933.34	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=-2.102;DP=561;FS=0.539;HRun=0;HaplotypeScore=115.2118;InbreedingCoeff=0.6869;MQ=65.71;MQ0=4;MQRankSum=-0.835;QD=7.24;ReadPosRankSum=-5.193;VQSLOD=0.8672;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:30.83:0,31,129	0/0:8,0:8:4.90:0,5,10	0/0:24,0:15:35.54:0,36,768	0/0:21,0:16:40.74:0,41,810	0/0:19,0:19:51.14:0,51,979	0/0:24,0:24:17.30:0,17,35	0/0:31,0:31:23.86:0,24,84	1/1:16,1:16:4.93:152,5,0	0/0:19,0:19:13.18:0,13,28	0/0:30,0:29:81.25:0,81,1530	0/0:15,0:15:42.11:0,42,802	0/0:25,0:25:72.25:0,72,1448	0/0:17,0:17:15.32:0,15,83	0/0:21,0:21:7.71:0,8,41	0/0:16,0:16:45.07:0,45,818	0/0:13,0:13:11.44:0,11,586	0/1:19,0:17:41.87:42,0,76	0/0:23,0:23:19.74:0,20,90	1/1:13,2:15:34.95:262,35,0	1/1:17,0:17:18.97:127,19,0	1/1:27,4:31:38.03:350,38,0	0/1:16,0:17:6.55:34,0,7	0/0:19,0:19:13:0,13,28	0/0:22,0:22:11.39:0,11,46	0/0:13,0:13:5.82:0,6,15	0/0:17,0:17:51.18:0,51,1061	1/1:13,0:13:7.58:137,8,0	0/0:8,0:8:21.06:0,21,425
chr10	102859962	.	GGT	G	5430.12	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=12.481;DP=556;FS=10.218;HRun=0;HaplotypeScore=88.9443;InbreedingCoeff=0.9624;MQ=65.81;MQ0=3;MQRankSum=-1.689;QD=14.60;ReadPosRankSum=3.966;VQSLOD=4.2266;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:47,0:47:44.28:537,44,0	1/1:8,0:8:17.39:99,17,0	0/0:24,0:15:42.60:0,43,625	0/0:21,0:16:12.10:0,12,595	0/0:18,0:18:51.15:0,51,796	1/1:24,0:24:57.97:325,58,0	1/1:31,0:31:48.37:352,48,0	1/1:15,2:16:23.68:237,24,0	1/1:18,0:18:49.50:296,49,0	0/0:27,0:27:81.08:0,81,1228	0/0:15,0:15:42.11:0,42,657	0/0:25,0:25:72.23:0,72,1144	1/1:17,0:17:11.10:159,11,0	1/1:19,1:20:31.54:302,32,0	0/0:16,0:16:45.06:0,45,669	0/0:13,0:13:11.44:0,11,473	1/1:19,0:17:22.25:139,22,0	1/1:23,0:23:6.53:211,7,0	1/1:4,11:15:35.82:373,36,0	1/1:11,5:16:24.42:284,24,0	1/1:21,10:31:65.73:758,66,0	1/1:17,0:17:35.12:219,35,0	1/1:18,1:19:52.18:302,52,0	1/1:22,1:23:11.60:275,12,0	1/1:13,0:13:37.85:239,38,0	0/0:17,0:17:51.17:0,51,851	1/1:14,0:14:34.32:324,34,0	0/0:8,0:8:21.06:0,21,343
chr10	102859963	.	GT	G	1540.73	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-3.483;DP=551;FS=0.000;HRun=1;HaplotypeScore=92.8996;InbreedingCoeff=0.9563;MQ=66.92;MQ0=2;MQRankSum=-1.500;QD=14.14;ReadPosRankSum=-7.736;VQSLOD=0.0132;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:56.73:0,57,252	0/0:8,0:8:11.71:0,12,40	0/0:24,1:16:37.73:0,38,523	0/0:21,0:16:28.42:0,28,474	0/0:18,0:18:51.14:0,51,633	0/0:23,0:23:41.68:0,42,139	0/0:31,0:31:56.29:0,56,205	1/1:15,1:16:27.75:213,28,0	0/0:18,0:18:28.06:0,28,97	0/0:27,0:27:81.06:0,81,983	0/0:14,0:14:42.11:0,42,523	0/0:25,0:25:72.18:0,72,884	0/0:17,0:17:25.19:0,25,96	0/0:20,0:20:19.43:0,19,113	0/0:15,0:15:45.07:0,45,531	0/0:13,0:13:14.42:0,14,396	1/1:15,2:15:33.03:250,33,0	0/0:23,0:23:40.46:0,40,160	1/1:13,1:14:35.79:265,36,0	1/1:13,2:15:26.80:194,27,0	1/1:29,2:31:63.88:474,64,0	0/0:17,0:17:5.59:0,6,42	0/0:19,0:19:29.94:0,30,115	0/0:24,0:24:28.06:0,28,161	0/0:13,0:13:10.93:0,11,59	0/0:17,0:17:51.16:0,51,661	1/1:12,4:16:40.54:332,41,0	0/0:7,0:7:21.05:0,21,260
chr10	102861473	.	ATG	A	467.92	PASS	AB=0.778;AC=25;AF=0.500;AN=50;BaseQRankSum=0.144;DP=686;FS=1.956;HRun=0;HaplotypeScore=141.8324;InbreedingCoeff=0.5235;MQ=64.64;MQ0=21;MQRankSum=-2.225;QD=1.55;ReadPosRankSum=1.057;VQSLOD=2.3191;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:26.66:0,27,260	0/0:6,0:7:5.99:0,6,51	./.	./.	1/1:19,3:22:6.01:62,6,0	0/0:14,0:20:3:0,3,26	0/0:21,0:30:3:0,3,26	./.	0/0:17,0:18:11.78:0,12,110	1/1:20,1:20:5.46:41,5,0	1/1:12,1:15:8.59:58,9,0	1/1:20,5:24:1.06:57,1,0	0/0:22,0:22:14.91:0,15,130	0/0:21,0:27:5.59:0,6,35	1/1:19,0:29:17.73:76,18,0	1/1:13,4:17:20.64:179,21,0	1/1:32,0:35:5.68:28,6,0	0/0:11,0:10:6.38:0,6,53	1/1:29,0:28:2.84:14,3,0	1/1:20,0:20:2.68:11,3,0	1/1:45,0:44:1.63:5,2,0	0/0:27,0:27:2.99:0,3,25	0/0:15,0:18:5.94:0,6,42	0/0:29,0:40:7.79:0,8,58	0/0:14,0:13:5.99:0,6,61	1/1:17,3:19:8.29:72,8,0	1/1:17,0:17:0.40:1,0,0	0/1:5,2:7:25.95:26,0,38
chr10	102861513	.	GTGTGTGTGTGTA	G	1692.35	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-1.006;DP=618;FS=10.199;HRun=0;HaplotypeScore=215.4927;InbreedingCoeff=0.8158;MQ=55.30;MQ0=26;MQRankSum=-0.761;QD=12.72;ReadPosRankSum=0.352;VQSLOD=1.2936;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:81.23:0,81,2214	0/0:9,0:9:12.02:0,12,410	0/0:23,0:11:33.03:0,33,332	0/0:40,0:23:51.33:0,51,524	0/0:17,0:15:28.96:0,29,747	0/0:15,0:14:15.04:0,15,436	0/0:28,0:25:36.51:0,37,827	1/1:19,0:18:24.64:348,25,0	0/0:18,0:18:35.99:0,36,774	0/0:17,0:17:44.43:0,44,830	0/0:14,0:14:33.06:0,33,723	0/0:31,0:30:68.53:0,69,1358	0/0:17,0:17:38.23:0,38,993	0/0:19,0:19:29.83:0,30,410	0/1:22,0:22:99:342,0,155	0/0:20,0:20:54.25:0,54,1555	0/0:31,0:31:42.61:0,43,378	0/0:11,0:9:26.97:0,27,479	1/1:9,1:9:16.33:239,16,0	1/1:5,18:22:6.10:111,6,0	1/1:42,0:39:54.85:696,55,0	0/0:29,0:28:26.85:0,27,440	0/0:17,0:17:17.33:0,17,477	0/0:37,0:36:61.14:0,61,863	0/0:17,0:16:26.83:0,27,691	0/0:19,0:18:47.23:0,47,1137	1/1:9,8:17:5.42:124,5,0	0/0:7,0:7:15.05:0,15,594
chr10	102862726	.	A	AG	14843.60	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-13.769;DP=609;FS=1.101;HRun=4;HaplotypeScore=54.9816;InbreedingCoeff=0.9991;MQ=81.94;MQ0=0;MQRankSum=-2.886;QD=34.76;ReadPosRankSum=1.712;VQSLOD=5.3719;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,48:49:99:1880,138,0	1/1:1,9:10:24.08:328,24,0	0/0:20,0:20:51.14:0,51,576	0/0:11,0:11:23.60:0,24,264	0/0:19,0:19:51.08:0,51,553	1/1:0,28:28:72.24:984,72,0	1/1:2,21:23:54.18:739,54,0	1/1:3,23:26:69.20:911,69,0	1/1:3,20:23:57.19:779,57,0	0/0:23,0:23:66.18:0,66,742	0/0:17,0:17:39.10:0,39,435	0/0:26,0:26:72.20:0,72,816	1/1:4,21:25:66.22:899,66,0	1/1:2,15:17:42.14:574,42,0	1/1:1,29:30:84.28:1149,84,0	0/0:22,0:22:57.13:0,57,627	1/1:0,23:23:60.20:821,60,0	1/1:1,17:18:48.16:656,48,0	1/1:2,15:18:48.10:598,48,0	1/1:1,12:13:30.10:410,30,0	1/1:4,19:23:45.15:616,45,0	1/1:1,18:19:42.03:548,42,0	1/1:2,11:13:30.10:408,30,0	1/1:1,23:24:69.23:944,69,0	1/1:1,21:22:51.17:697,51,0	0/0:27,0:27:75.19:0,75,833	1/1:0,23:23:66.22:903,66,0	0/0:17,0:17:45.13:0,45,510
chr10	102863129	.	AG	A	5538.41	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.172;DP=667;FS=2.433;HRun=3;HaplotypeScore=63.6203;InbreedingCoeff=0.9991;MQ=77.36;MQ0=0;MQRankSum=-3.873;QD=33.77;ReadPosRankSum=0.387;VQSLOD=5.3217;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,1758	0/0:7,0:7:21.07:0,21,302	0/0:18,0:18:51.15:0,51,687	0/0:12,0:12:36.07:0,36,465	0/0:17,0:17:45.15:0,45,647	0/0:26,0:26:78.25:0,78,1104	0/0:28,0:28:84.26:0,84,1184	1/1:3,19:22:54.17:669,54,0	0/0:27,0:27:81.27:0,81,1157	0/0:29,0:29:87.28:0,87,1230	0/0:14,0:14:39.12:0,39,537	0/0:31,0:31:93.31:0,93,1337	0/0:17,0:17:51.17:0,51,724	0/0:37,0:37:99:0,105,1491	1/1:3,32:35:93.29:1151,93,0	0/0:13,0:13:39.12:0,39,543	0/0:40,0:40:99:0,117,1661	0/0:22,0:22:66.21:0,66,932	1/1:1,16:17:45.14:557,45,0	1/1:0,17:17:51.16:632,51,0	1/1:0,49:49:99:1637,132,0	0/0:28,0:28:75.25:0,75,1080	0/0:19,0:19:51.17:0,51,734	0/0:31,0:31:93.31:0,93,1338	0/0:13,0:13:39.13:0,39,562	0/0:16,0:16:48.16:0,48,691	1/1:0,24:24:72.23:892,72,0	0/0:13,0:13:39.10:0,39,525
chr10	102863405	.	CA	C	3500.99	PASS	AB=0.797;AC=40;AF=0.714;AN=56;BaseQRankSum=7.187;DP=602;FS=3.172;HRun=15;HaplotypeScore=77.1463;InbreedingCoeff=0.2554;MQ=73.35;MQ0=2;MQRankSum=-2.587;QD=6.51;ReadPosRankSum=4.340;VQSLOD=3.0295;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:10,19:30:15.20:271,0,15	1/1:7,7:15:22.61:140,23,0	0/1:27,1:19:8.29:8,0,78	0/0:21,0:15:8.80:0,9,54	0/1:17,3:23:6.54:7,0,211	1/1:2,8:14:31.79:177,32,0	1/1:4,14:21:44.49:267,44,0	1/1:7,11:22:37.23:214,37,0	0/1:9,12:22:2.38:209,0,2	0/1:20,2:22:2.18:2,0,214	0/1:14,1:17:2.94:3,0,157	0/0:25,1:27:24.74:0,25,336	1/1:12,9:22:30.81:195,31,0	0/1:11,7:20:30.01:79,0,30	0/1:10,12:26:29.81:197,0,30	0/1:17,1:18:2:2,0,224	1/1:9,0:28:38.63:112,39,0	1/1:8,12:23:29.60:171,30,0	1/1:7,11:25:24.86:229,25,0	1/1:5,11:17:37.40:236,37,0	1/1:5,14:21:31.19:247,31,0	1/1:12,11:24:11.83:175,12,0	1/1:3,11:15:10.54:174,11,0	1/1:3,10:14:5.27:152,5,0	1/1:10,6:18:15.79:89,16,0	0/1:22,3:26:4.81:5,0,351	1/1:14,7:26:8.08:138,8,0	0/0:13,2:16:3.38:0,3,243
chr10	102864009	.	CCA	C	226.63	PASS	AB=0.875;AC=14;AF=0.280;AN=50;BaseQRankSum=1.523;DP=606;FS=3.071;HRun=0;HaplotypeScore=93.0145;InbreedingCoeff=0.0162;MQ=73.01;MQ0=39;MQRankSum=-0.201;QD=1.14;ReadPosRankSum=1.634;VQSLOD=1.8386;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:36:8.04:0,8,59	0/0:7,0:7:6:0,6,61	./.	./.	0/0:18,3:21:15.04:0,15,193	0/0:21,1:21:5.49:0,5,34	0/1:24,0:23:6.08:26,0,6	./.	0/0:9,0:13:11.95:0,12,98	0/1:16,3:19:87.43:87,0,104	0/1:7,1:10:23.13:23,0,60	0/1:11,7:18:40.35:40,0,193	0/0:15,0:15:11.47:0,11,91	0/0:9,0:11:6.01:0,6,62	1/1:9,0:14:5.68:28,6,0	0/1:10,5:13:49.28:49,0,97	0/1:34,2:32:42.34:42,0,282	0/0:20,0:21:22.56:0,23,225	0/0:14,0:12:1.25:0,1,3	1/1:10,0:18:5.68:28,6,0	0/0:40,0:32:2.94:0,3,18	0/1:10,0:11:20.05:20,0,75	0/0:13,0:12:9.75:0,10,96	0/0:24,1:38:15.87:0,16,384	0/0:18,0:18:6.95:0,7,117	0/1:20,0:20:11.11:11,0,169	1/1:4,0:6:2.67:14,3,0	0/0:17,0:17:3.29:0,3,78
chr10	102864505	.	C	CA	577.92	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.459;DP=421;FS=17.498;HRun=1;HaplotypeScore=55.2547;InbreedingCoeff=0.8256;MQ=94.21;MQ0=0;MQRankSum=-1.501;QD=30.42;ReadPosRankSum=-0.255;VQSLOD=1.9275;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.21:0,78,976	0/0:9,0:9:27.09:0,27,350	0/0:14,0:14:2.75:0,3,268	0/0:25,0:25:33.40:0,33,552	0/0:17,0:17:48.13:0,48,605	0/0:18,0:18:54.18:0,54,700	0/0:24,0:24:72.18:0,72,890	0/0:19,0:19:57.18:0,57,728	0/0:19,0:19:57.17:0,57,723	0/0:20,0:20:57.16:0,57,712	0/0:7,0:7:21.07:0,21,272	0/0:14,0:14:39.13:0,39,505	0/0:12,0:12:27.09:0,27,350	0/0:11,0:11:30.10:0,30,388	0/0:8,0:8:24.05:0,24,283	0/0:13,0:13:39.13:0,39,506	1/1:1,18:19:45.15:673,45,0	0/0:14,0:14:39.10:0,39,486	0/0:8,0:8:24.08:0,24,311	0/0:13,0:13:39.11:0,39,492	0/0:12,0:12:36.10:0,36,453	0/0:14,0:14:42.12:0,42,520	0/0:13,0:13:36.12:0,36,467	0/0:13,0:13:30.03:0,30,354	0/0:16,0:16:48.15:0,48,610	0/0:21,0:21:60.19:0,60,778	0/0:13,0:13:36.10:0,36,451	0/0:6,0:6:15:0,15,161
chr10	102864582	.	G	GAGAGAA	4238.18	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=5.560;DP=517;FS=1.470;HRun=0;HaplotypeScore=129.1299;InbreedingCoeff=0.6431;MQ=62.53;MQ0=15;MQRankSum=-4.769;QD=15.14;ReadPosRankSum=-1.616;VQSLOD=3.6659;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:33:32.67:373,33,0	1/1:10,0:10:29.52:267,30,0	0/0:30,0:9:1.13:0,1,55	0/0:66,0:21:26.25:0,26,200	0/0:8,0:8:20.97:0,21,214	1/1:15,0:13:23.89:230,24,0	0/1:24,0:24:8.49:132,0,8	0/1:23,0:22:82.16:82,0,297	1/1:17,0:17:8.09:350,8,0	0/0:12,0:12:29.28:0,29,383	0/0:10,0:9:15.01:0,15,169	0/0:17,0:17:44.92:0,45,434	1/1:15,0:15:5.90:147,6,0	1/1:13,0:13:34.01:285,34,0	0/0:16,0:16:26.93:0,27,216	0/0:23,0:23:62.38:0,62,620	1/1:21,7:28:73.37:1156,73,0	1/1:12,0:11:32.74:308,33,0	0/1:19,0:19:24.28:24,0,272	0/0:9,0:9:6.94:0,7,52	0/0:14,0:14:14.99:0,15,126	1/1:15,0:14:23.36:213,23,0	1/1:9,0:9:14.61:102,15,0	1/1:17,0:17:12.37:235,12,0	1/1:15,0:14:27.45:235,27,0	0/0:23,0:23:44.22:0,44,398	0/1:14,0:14:97.83:98,0,146	0/0:9,0:9:23.72:0,24,228
chr10	102865608	.	CTGTGTG	C	5275.30	PASS	AB=0.638;AC=30;AF=0.536;AN=56;BaseQRankSum=12.983;DP=876;FS=3.923;HRun=0;HaplotypeScore=238.5467;InbreedingCoeff=0.6734;MQ=52.35;MQ0=19;MQRankSum=-6.692;QD=11.27;ReadPosRankSum=1.490;VQSLOD=3.4136;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,20:35:49.56:184,0,50	1/1:1,8:9:20.78:308,21,0	0/0:60,0:20:9.02:0,9,105	0/0:73,0:22:12.01:0,12,213	0/0:23,0:24:57.19:0,57,1435	1/1:7,16:24:44.87:657,45,0	1/1:6,18:24:23.28:382,23,0	0/0:31,0:44:9.84:0,10,163	1/1:7,19:27:29.81:559,30,0	0/0:49,0:48:90.27:0,90,2393	0/0:19,0:19:36.12:0,36,1040	0/0:31,0:33:66.21:0,66,1818	1/1:7,26:33:53.80:952,54,0	1/1:9,13:22:29.65:413,30,0	1/1:15,2:48:16.48:74,16,0	0/0:35,0:37:93.32:0,93,2604	0/1:14,12:27:12.18:374,0,12	0/1:9,12:21:10.66:357,0,11	0/0:14,0:21:9.19:0,9,117	1/1:8,1:27:20.62:110,21,0	0/1:20,0:48:3.10:3,0,68	1/1:17,17:33:10.63:269,11,0	1/1:5,13:18:23.84:262,24,0	1/1:14,10:24:2.71:58,3,0	1/1:9,12:23:8.62:290,9,0	0/0:30,0:30:65.24:0,65,1650	1/1:5,0:22:12.65:24,13,0	0/0:12,0:16:30.08:0,30,721
chr10	102865883	.	GGTGTGT	G	2318.20	PASS	AB=0.874;AC=23;AF=0.411;AN=56;BaseQRankSum=6.513;DP=877;FS=7.139;HRun=0;HaplotypeScore=217.9999;InbreedingCoeff=0.4856;MQ=53.63;MQ0=20;MQRankSum=-6.752;QD=4.97;ReadPosRankSum=-1.635;VQSLOD=1.3512;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,11:30:5.87:81,6,0	1/1:10,1:12:9.50:178,10,0	0/1:45,0:22:0:0,0,0	0/0:54,0:32:0:0,0,0	0/0:18,0:22:33.10:0,33,762	1/1:22,5:27:12.89:156,13,0	1/1:27,12:39:15.96:261,16,0	0/0:38,0:36:9.03:0,9,181	1/1:18,15:35:26.99:486,27,0	0/0:37,0:36:57.19:0,57,1279	0/0:22,0:24:24.07:0,24,521	0/0:26,0:31:45.11:0,45,1034	0/1:18,7:26:10.46:152,0,10	1/1:23,10:33:23.95:346,24,0	0/1:33,1:36:3.80:4,0,1163	0/0:23,0:28:35.27:0,35,857	0/1:16,0:24:32.42:32,0,35	0/1:21,1:23:70.30:98,0,70	0/0:20,0:16:21.07:0,21,577	0/0:25,0:29:33.08:0,33,735	0/0:66,0:67:71.24:0,71,1871	1/1:18,17:34:9.03:183,9,0	0/1:24,2:27:13.23:158,0,13	0/1:37,6:41:27.05:191,0,27	1/1:18,7:25:8.63:182,9,0	0/0:25,0:30:53.84:0,54,1184	0/0:11,0:13:20.19:0,20,314	0/0:18,0:17:30.10:0,30,830
chr10	102867082	.	G	GA	8013.49	PASS	AB=0.933;AC=52;AF=0.929;AN=56;BaseQRankSum=-0.423;DP=417;FS=6.146;HRun=1;HaplotypeScore=142.2146;InbreedingCoeff=-0.0718;MQ=66.24;MQ0=0;MQRankSum=-4.583;QD=19.22;ReadPosRankSum=5.044;VQSLOD=5.0809;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:21.45:180,21,0	1/1:8,0:8:23.99:206,24,0	0/1:13,4:17:69.40:113,0,69	0/1:11,1:12:25.30:131,0,25	1/1:22,0:22:52.70:446,53,0	1/1:19,0:19:50.98:444,51,0	1/1:16,0:16:31.56:242,32,0	1/1:20,0:20:17.98:305,18,0	1/1:13,0:13:32.94:279,33,0	1/1:20,0:20:34.73:391,35,0	1/1:16,0:16:38.98:342,39,0	1/1:13,0:13:26.97:234,27,0	1/1:21,0:21:47.95:434,48,0	1/1:6,0:6:14.98:134,15,0	1/1:20,0:20:22.06:329,22,0	1/1:12,0:11:29.95:254,30,0	1/1:7,0:7:17.98:153,18,0	0/1:5,0:5:5.97:77,0,6	0/1:9,0:9:6.29:130,0,6	1/1:18,0:18:47.91:404,48,0	1/1:9,0:9:12.82:95,13,0	1/1:21,0:21:51.38:435,51,0	1/1:20,0:20:47.75:403,48,0	1/1:10,0:10:23.98:210,24,0	1/1:25,0:25:62.91:540,63,0	1/1:15,0:14:35.72:291,36,0	1/1:27,0:27:74.96:646,75,0	1/1:7,0:7:20.93:166,21,0
chr10	102867405	.	TA	T	9262.02	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=12.069;DP=624;FS=0.975;HRun=1;HaplotypeScore=74.5162;InbreedingCoeff=0.9987;MQ=86.74;MQ0=0;MQRankSum=-4.916;QD=36.32;ReadPosRankSum=3.123;VQSLOD=5.2527;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,49:49:99:1881,135,0	1/1:0,14:14:39.13:527,39,0	0/0:22,0:22:45.22:0,45,634	0/0:26,0:26:71.87:0,72,889	0/0:18,0:18:48.11:0,48,683	1/1:0,11:11:27.09:371,27,0	1/1:0,19:19:48.16:670,48,0	0/0:28,0:28:84.24:0,84,1255	1/1:0,15:15:42.14:586,42,0	0/0:28,0:28:81.26:0,81,1228	0/0:17,0:17:51.15:0,51,750	0/0:23,0:23:69.19:0,69,1028	1/1:0,16:16:36.10:502,36,0	1/1:0,22:22:57.19:795,57,0	0/0:39,0:39:99:0,117,1826	0/0:27,0:27:81.22:0,81,1194	0/0:21,0:21:60.09:0,60,846	1/1:0,14:14:42.14:586,42,0	0/0:18,0:18:51.11:0,51,706	0/0:18,0:18:53.64:0,54,785	0/0:35,0:35:99:0,105,1570	1/1:0,32:32:89.82:1195,90,0	1/1:0,20:20:45.07:585,45,0	1/1:0,21:21:51.17:709,51,0	1/1:0,22:22:63.21:855,63,0	0/0:20,0:20:60.19:0,60,935	0/0:23,0:23:69.22:0,69,1074	0/0:6,0:6:18.06:0,18,287
chr10	102871007	.	AGGAG	A	254.20	PASS	AC=12;AF=0.667;AN=18;BaseQRankSum=-1.931;DP=148;FS=0.000;HRun=0;HaplotypeScore=21.9615;MQ=76.33;MQ0=5;MQRankSum=0.382;QD=4.71;ReadPosRankSum=0.000;VQSLOD=0.9526;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:6:56,6,0	./.	./.	./.	./.	./.	1/1:9,0:9:3.01:45,3,0	./.	./.	./.	./.	0/0:4,0:4:2.96:0,3,19	1/1:7,1:8:3.01:47,3,0	1/1:6,3:9:3.01:47,3,0	./.	./.	./.	./.	./.	0/0:3,0:2:0.47:0,0,1	./.	./.	./.	1/1:8,2:10:3.01:47,3,0	1/1:2,3:5:6.02:95,6,0	./.	0/0:4,0:4:2.99:0,3,24	./.
chr10	102874143	.	T	TA	11149.50	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=9.204;DP=476;FS=2.522;HRun=1;HaplotypeScore=126.4608;InbreedingCoeff=0.9616;MQ=68.54;MQ0=0;MQRankSum=-13.954;QD=39.96;ReadPosRankSum=2.052;VQSLOD=4.5299;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:81.05:1127,81,0	1/1:1,13:14:39.13:583,39,0	0/0:10,0:10:25.78:0,26,275	0/0:17,0:16:37.67:0,38,511	0/0:3,0:3:6.02:0,6,78	1/1:3,24:27:78.14:1103,78,0	1/1:2,22:24:66.22:986,66,0	0/0:28,0:28:84.25:0,84,1065	1/1:0,18:18:54.18:806,54,0	0/0:5,0:5:12.04:0,12,156	0/0:6,0:6:12.04:0,12,156	0/0:10,0:10:30.10:0,30,389	1/1:0,25:25:75.16:1071,75,0	1/1:4,24:28:84.10:1144,84,0	0/0:18,0:18:54.18:0,54,700	0/0:8,0:8:24.08:0,24,310	1/1:1,24:25:75.25:1108,75,0	1/1:0,13:13:39.13:582,39,0	0/0:14,0:14:39.07:0,39,486	0/0:8,0:8:24.08:0,24,311	0/0:34,0:34:85.36:0,85,1081	1/1:0,15:15:45.06:621,45,0	1/1:4,16:20:56.93:725,57,0	1/1:0,29:29:66.30:986,66,0	1/1:3,6:9:23.97:307,24,0	0/0:10,0:10:27.07:0,27,336	0/0:23,0:23:54.18:0,54,700	0/0:3,0:3:6.02:0,6,77
chr10	102874153	.	ACCC	A	2354.58	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=13.010;DP=458;FS=2.764;HRun=4;HaplotypeScore=171.6921;InbreedingCoeff=0.9361;MQ=65.22;MQ0=1;MQRankSum=-12.806;QD=8.47;ReadPosRankSum=1.749;VQSLOD=-0.2514;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,1:28:41.06:230,41,0	1/1:13,0:13:31.94:155,32,0	0/0:8,0:8:18.02:0,18,218	0/0:13,0:11:18.82:0,19,362	0/0:1,0:1:3.01:0,3,50	1/1:28,0:28:56.52:287,57,0	1/1:25,0:25:25.38:208,25,0	0/0:22,0:22:63.08:0,63,789	1/1:22,0:22:50.82:251,51,0	0/0:4,0:4:12.01:0,12,201	0/0:4,0:4:12.04:0,12,230	0/0:10,0:11:33.02:0,33,460	1/1:29,2:31:49.80:350,50,0	1/1:26,1:27:31.90:233,32,0	0/0:20,0:20:57.07:0,57,637	0/0:7,0:7:21.05:0,21,344	1/1:23,0:23:9.70:154,10,0	1/1:12,1:13:29.28:165,29,0	0/0:10,0:10:30.02:0,30,306	0/0:8,0:8:7.61:0,8,174	0/0:34,0:34:85.07:0,85,839	1/1:12,1:13:17.99:117,18,0	1/1:18,0:18:38.85:175,39,0	1/1:29,1:30:32.65:180,33,0	1/1:7,0:7:16.57:76,17,0	0/0:10,0:10:23.98:0,24,320	0/0:22,0:22:53.91:0,54,527	0/0:4,0:4:9.03:0,9,208
chr10	102874158	.	ACC	A	8404.37	PASS	AB=0.938;AC=39;AF=0.722;AN=54;BaseQRankSum=4.472;DP=436;FS=0.799;HRun=11;HaplotypeScore=137.4145;InbreedingCoeff=0.7824;MQ=65.98;MQ0=1;MQRankSum=-4.986;QD=21.44;ReadPosRankSum=2.958;VQSLOD=3.4190;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,17:26:41.72:391,42,0	1/1:3,9:12:33.04:333,33,0	0/0:8,0:7:5.90:0,6,47	0/1:14,0:12:59.49:59,0,60	./.	1/1:2,23:25:57.03:590,57,0	1/1:7,20:27:52.31:546,52,0	1/1:8,12:20:38.89:390,39,0	1/1:5,15:20:45.09:478,45,0	0/0:3,0:3:3:0,3,27	0/0:5,0:5:3.01:0,3,46	0/0:10,0:10:16.79:0,17,165	1/1:8,21:29:69.11:722,69,0	1/1:8,20:28:63.01:647,63,0	1/1:4,17:21:45.03:479,45,0	0/0:6,0:6:14.64:0,15,193	1/1:10,11:21:38.89:379,39,0	1/1:2,9:11:30.03:307,30,0	1/1:5,7:12:33.04:336,33,0	1/1:2,7:9:20.89:206,21,0	1/1:2,27:29:65.95:699,66,0	1/1:4,8:12:29.82:274,30,0	1/1:4,14:18:41.89:428,42,0	1/1:10,19:29:47.82:504,48,0	1/1:1,6:7:18.05:191,18,0	0/0:7,0:7:6.79:0,7,44	1/1:4,17:21:42.10:446,42,0	0/0:4,0:4:9.01:0,9,116
chr10	102874166	.	C	CA	2889.88	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=3.623;DP=463;FS=0.000;HRun=0;HaplotypeScore=152.0926;InbreedingCoeff=0.8461;MQ=66.81;MQ0=1;MQRankSum=-6.100;QD=7.07;ReadPosRankSum=7.104;VQSLOD=2.9878;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,1:26:21.29:171,21,0	1/1:13,0:13:24.27:111,24,0	0/0:12,0:11:20.87:0,21,179	0/1:18,0:14:3.58:4,0,130	0/0:2,0:2:3:0,3,26	1/1:27,0:27:43.35:168,43,0	1/1:27,0:27:26.78:150,27,0	1/1:16,1:17:45.52:247,46,0	1/1:19,0:19:34.07:127,34,0	0/0:3,0:3:3:0,3,28	0/0:5,0:5:11.99:0,12,116	0/0:11,0:11:25.53:0,26,233	1/1:26,1:27:28.28:159,28,0	1/1:28,1:29:30.83:134,31,0	1/1:20,0:20:21.13:170,21,0	0/0:8,0:8:21:0,21,234	1/1:23,0:23:45.78:232,46,0	1/1:16,0:16:26.96:134,27,0	1/1:11,0:11:30.10:170,30,0	1/1:9,0:9:14.63:53,15,0	1/1:32,0:32:72.45:370,72,0	1/1:13,1:14:14.85:136,15,0	1/1:18,0:18:12.40:77,12,0	1/1:28,0:28:39.72:159,40,0	1/1:12,0:12:22.36:103,22,0	0/0:9,0:9:10.17:0,10,72	1/1:23,0:23:43.03:211,43,0	0/0:4,0:4:9.01:0,9,107
chr10	102875300	.	A	AT	6932.72	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-9.843;DP=760;FS=0.660;HRun=3;HaplotypeScore=71.8959;InbreedingCoeff=0.9984;MQ=93.92;MQ0=0;MQRankSum=-4.269;QD=38.73;ReadPosRankSum=-1.956;VQSLOD=4.2200;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1332	0/0:15,0:15:45.14:0,45,540	0/0:31,1:32:80.36:0,80,948	0/0:34,0:34:72.03:0,72,954	0/0:29,0:29:75.21:0,75,887	0/0:23,0:23:69.19:0,69,808	0/0:36,0:36:99:0,102,1201	1/1:4,28:32:84.27:1158,84,0	0/0:27,0:27:75.19:0,75,872	0/0:29,0:29:84.26:0,84,1008	0/0:19,0:19:57.16:0,57,673	0/0:31,0:31:93.26:0,93,1090	0/0:32,0:32:93.27:0,93,1104	0/0:27,0:27:78.23:0,78,924	1/1:0,24:24:66.22:924,66,0	0/0:23,0:23:69.21:0,69,824	0/0:30,0:30:84.24:0,84,996	0/0:22,0:22:54.16:0,54,648	1/1:0,27:27:81.27:1131,81,0	1/1:2,23:25:69.23:966,69,0	1/1:2,46:48:99:1787,129,0	0/0:29,0:29:81.24:0,81,960	0/0:23,0:23:63.19:0,63,756	0/0:28,0:28:81.25:0,81,972	0/0:20,0:19:57.15:0,57,671	0/0:25,0:25:75.23:0,75,900	1/1:0,23:23:69.23:966,69,0	0/0:8,0:8:18.05:0,18,216
chr10	102877970	.	T	TA	2478.04	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-7.602;DP=578;FS=4.453;HRun=11;HaplotypeScore=67.9789;InbreedingCoeff=0.8729;MQ=74.97;MQ0=0;MQRankSum=1.639;QD=15.20;ReadPosRankSum=-3.798;VQSLOD=3.0997;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:85.67:0,86,653	0/0:4,0:4:11.95:0,12,93	0/0:21,0:19:26.58:0,27,162	0/1:17,0:18:8.35:22,0,8	0/0:25,0:25:62.70:0,63,484	0/0:12,0:12:26.87:0,27,209	0/0:23,0:24:61.76:0,62,467	1/1:7,22:29:50.80:563,51,0	0/0:20,0:20:50.79:0,51,392	0/0:20,0:21:49.35:0,49,363	0/0:11,0:11:17.84:0,18,137	0/0:15,0:15:26.86:0,27,207	0/0:14,0:14:35.84:0,36,278	0/0:16,0:16:38.82:0,39,302	1/1:6,15:22:38.44:370,38,0	0/0:20,0:20:41.78:0,42,323	0/0:27,0:29:79.74:0,80,609	0/0:21,0:24:50.84:0,51,358	1/1:8,24:34:82.62:779,83,0	1/1:6,11:17:9.75:259,10,0	1/1:6,11:19:29.89:288,30,0	0/0:15,0:16:38.77:0,39,296	0/0:18,2:20:14.28:0,14,288	0/0:27,0:27:43.02:0,43,497	0/0:23,0:24:55.81:0,56,422	0/0:29,0:30:66.95:0,67,500	1/1:5,18:24:22.88:384,23,0	0/0:6,0:6:5.97:0,6,46
chr10	102880401	.	G	GAAACA	19790.58	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-4.364;DP=722;FS=1.749;HRun=0;HaplotypeScore=137.2510;InbreedingCoeff=0.9714;MQ=74.75;MQ0=0;MQRankSum=-6.386;QD=39.90;ReadPosRankSum=-0.871;VQSLOD=4.9277;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,32:46:80.53:2213,81,0	1/1:5,5:10:15.05:428,15,0	0/0:32,0:27:10.76:0,11,184	0/0:38,0:33:33.76:0,34,482	0/0:29,0:29:69.22:0,69,1227	1/1:4,13:19:36.12:1015,36,0	1/1:11,19:30:51.18:1447,51,0	1/1:32,0:32:51.03:868,51,0	1/1:11,17:28:42.14:1197,42,0	0/0:23,0:23:57.19:0,57,1025	0/0:8,0:8:6.02:0,6,111	0/0:23,0:23:51.17:0,51,945	1/1:4,16:21:48.16:1363,48,0	1/1:8,10:18:27.09:771,27,0	1/1:18,0:33:45.15:972,45,0	0/0:26,0:26:45.14:0,45,790	1/1:8,14:23:33.11:921,33,0	1/1:7,11:19:24.08:686,24,0	1/1:19,0:29:39.05:677,39,0	1/1:16,0:36:60.20:1177,60,0	1/1:16,0:23:15.05:288,15,0	1/1:8,16:24:51.17:1250,51,0	1/1:14,6:22:30.57:785,31,0	1/1:10,21:32:57.20:1627,57,0	1/1:6,12:19:30.10:857,30,0	0/0:29,0:29:68.75:0,69,1253	1/1:6,0:30:56.88:1248,57,0	0/0:17,0:17:45.11:0,45,799
chr10	102882163	.	CCT	C	282.80	PASS	AB=0.938;AC=13;AF=0.232;AN=56;BaseQRankSum=4.779;DP=465;FS=7.495;HRun=0;HaplotypeScore=104.2001;InbreedingCoeff=-0.2036;MQ=28.19;MQ0=16;MQRankSum=-0.002;QD=1.19;ReadPosRankSum=-0.941;VQSLOD=1.3475;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:3.70:0,4,179	0/0:9,1:9:10.14:0,10,95	0/0:51,0:3:12.04:0,12,171	0/1:51,0:4:16.32:16,0,59	0/0:24,2:24:2.65:0,3,48	0/1:16,2:16:11.64:12,0,53	0/0:15,0:14:1.39:0,1,84	0/1:20,0:13:13.02:13,0,173	0/1:6,0:5:6.19:6,0,8	0/1:30,2:28:99:163,0,377	1/1:10,0:9:1.39:4,1,0	0/0:7,0:7:11.83:0,12,139	0/0:8,0:7:8.91:0,9,75	0/0:6,0:4:2.04:0,2,6	0/0:5,0:4:0:0,0,0	0/0:7,0:7:2.14:0,2,58	0/0:9,0:9:4.26:0,4,61	0/1:2,1:3:15.81:16,0,19	0/1:13,1:12:41.67:42,0,186	0/1:13,0:12:2.73:3,0,52	0/1:19,0:15:2.71:3,0,12	0/1:13,3:13:6.18:6,0,25	0/0:15,1:15:3.86:0,4,28	0/0:15,2:16:2.44:0,2,10	0/0:13,3:15:5.33:0,5,52	0/1:33,2:32:99:125,0,446	0/0:2,0:2:5.98:0,6,70	0/0:5,0:5:11.14:0,11,110
chr10	102882164	.	CTCCTCT	C	1147.09	PASS	AB=0.964;AC=26;AF=0.464;AN=56;BaseQRankSum=4.208;DP=481;FS=1.283;HRun=0;HaplotypeScore=118.0157;InbreedingCoeff=-0.2980;MQ=28.21;MQ0=17;MQRankSum=-1.898;QD=3.64;ReadPosRankSum=-1.548;VQSLOD=2.0782;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:23:22.48:95,0,22	0/1:10,0:9:3.72:12,0,4	0/0:55,0:4:11.83:0,12,216	0/0:53,0:4:5.85:0,6,88	0/0:25,1:24:2.63:0,3,107	0/1:17,1:16:6.44:107,0,6	0/1:15,0:14:21.66:77,0,22	0/1:18,0:13:10.86:76,0,11	0/1:7,0:6:1.09:3,0,1	0/1:33,0:29:99:252,0,635	1/1:10,0:9:1.18:3,1,0	0/0:9,0:8:6.09:0,6,146	1/1:8,0:7:3.92:55,4,0	1/1:7,0:4:4.51:24,5,0	0/0:5,0:4:0:0,0,0	0/1:7,1:8:1.90:2,0,162	0/1:10,0:9:17.55:18,0,30	1/1:3,0:3:2.37:11,2,0	0/1:14,0:12:36.33:36,0,41	0/1:14,1:14:16.62:68,0,17	0/1:19,0:15:5.24:5,0,23	0/1:16,1:14:20.69:62,0,21	0/1:14,0:15:2.06:76,0,2	0/0:17,0:16:1.27:0,1,4	0/1:15,1:15:14.34:14,0,25	0/1:34,2:34:99:258,0,708	0/1:2,0:2:2.78:3,0,57	0/1:5,0:5:30.54:31,0,187
chr10	102882167	.	CTCT	C	195.85	PASS	AB=0.989;AC=19;AF=0.339;AN=56;BaseQRankSum=3.604;DP=553;FS=0.624;HRun=0;HaplotypeScore=129.5017;InbreedingCoeff=-0.2774;MQ=28.21;MQ0=22;MQRankSum=-1.545;QD=0.64;ReadPosRankSum=-0.706;VQSLOD=1.8947;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:26:29.07:29,0,114	0/1:11,0:10:8.51:9,0,17	0/0:61,0:4:12.04:0,12,195	0/0:65,0:4:2.98:0,3,68	0/0:22,2:24:3.17:0,3,69	0/1:20,0:16:19.29:19,0,66	0/1:16,0:15:16.59:17,0,98	0/1:21,0:15:6.05:6,0,124	0/1:9,0:8:2:2,0,31	0/1:40,0:35:69.80:70,0,517	1/1:11,0:11:1.26:4,1,0	0/1:10,0:10:1.35:1,0,98	0/1:9,0:8:3.60:4,0,13	0/1:9,0:6:1.88:2,0,23	0/0:6,0:5:2.38:0,2,24	0/1:9,0:9:13.56:14,0,75	0/0:11,0:10:2.79:0,3,51	0/0:3,0:3:5.24:0,5,21	0/1:16,0:12:5.03:5,0,181	0/1:16,0:15:5.68:6,0,63	0/0:22,0:16:5.74:0,6,37	1/1:18,0:15:9.39:61,9,0	0/1:18,2:19:12.65:17,0,13	0/0:22,0:20:5.35:0,5,58	0/0:17,0:16:2.97:0,3,30	0/1:41,1:39:66.70:67,0,586	0/0:2,0:2:1.07:0,1,31	0/0:7,0:7:6.93:0,7,152
chr10	102882173	.	CTCT	C	1200.26	PASS	AB=0.884;AC=19;AF=0.339;AN=56;BaseQRankSum=4.866;DP=669;FS=16.470;HRun=0;HaplotypeScore=148.1976;InbreedingCoeff=-0.4185;MQ=31.88;MQ0=31;MQRankSum=-3.302;QD=3.42;ReadPosRankSum=2.815;VQSLOD=1.4096;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:35:14.55:15,0,306	0/1:13,2:14:46.29:46,0,70	0/0:76,0:5:14.62:0,15,214	0/0:87,0:8:7.15:0,7,115	0/0:27,3:25:2.58:0,3,74	0/0:24,1:21:17.28:0,17,229	0/1:20,1:18:42.94:43,0,145	0/1:15,1:13:39.40:39,0,148	0/1:12,0:10:6.21:6,0,92	0/1:39,7:42:99:379,0,806	0/0:17,2:18:8.02:0,8,85	0/1:13,0:12:47.87:48,0,204	1/1:11,1:10:9.49:101,9,0	0/1:9,2:7:18.96:19,0,104	0/0:7,0:6:5.40:0,5,107	0/1:9,0:10:7.99:8,0,148	0/1:10,2:10:62.14:98,0,62	0/0:4,0:3:6.91:0,7,102	0/1:15,2:12:35.17:35,0,151	0/1:16,4:19:12.20:12,0,88	0/0:20,2:16:4.56:0,5,62	0/0:22,3:22:16.12:0,16,178	0/1:24,2:27:36.50:36,0,153	0/0:21,0:19:5.36:0,5,135	0/1:17,1:18:22:22,0,56	0/1:44,4:45:99:316,0,961	0/1:1,1:2:26.22:49,0,26	0/1:5,1:7:82.61:83,0,175
chr10	102882180	.	CT	C	1148.91	PASS	AB=0.925;AC=20;AF=0.357;AN=56;BaseQRankSum=9.049;DP=793;FS=5.090;HRun=1;HaplotypeScore=167.3550;InbreedingCoeff=-0.5800;MQ=33.99;MQ0=42;MQRankSum=-4.952;QD=2.43;ReadPosRankSum=3.606;VQSLOD=-0.1427;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:41,1:36:47.06:47,0,363	0/1:15,2:16:38.23:38,0,195	0/0:89,0:7:16.83:0,17,184	0/0:103,0:10:6.72:0,7,111	0/0:31,1:29:2.35:0,2,48	0/1:30,1:25:60.37:60,0,179	0/1:22,2:21:48:48,0,156	0/1:26,2:19:48.41:48,0,98	0/1:12,0:10:18.72:19,0,41	0/1:52,5:52:99:332,0,774	0/1:22,2:23:32.73:33,0,40	0/1:15,0:14:16.17:16,0,174	0/1:11,2:11:72.04:74,0,72	0/0:9,2:7:10.52:0,11,118	0/1:8,0:8:11.56:12,0,61	0/1:11,0:11:69.76:70,0,102	0/1:10,2:10:61.07:61,0,149	0/0:4,0:3:1.59:0,2,79	0/1:16,2:12:45.33:45,0,116	0/1:25,5:27:58.31:58,0,231	0/0:23,2:19:9.70:0,10,128	0/0:32,1:30:33.13:0,33,390	0/1:30,2:32:46.79:47,0,148	0/0:21,0:18:5.40:0,5,95	0/1:23,3:25:35.74:36,0,85	0/1:57,2:54:99:151,0,824	0/1:2,1:3:3.42:36,0,3	0/1:10,1:11:70.76:71,0,156
chr10	102882192	.	CCT	C	899.60	PASS	AB=0.875;AC=11;AF=0.196;AN=56;BaseQRankSum=9.970;DP=930;FS=8.165;HRun=0;HaplotypeScore=197.3763;InbreedingCoeff=-0.2669;MQ=36.87;MQ0=51;MQRankSum=-4.488;QD=2.78;ReadPosRankSum=4.712;VQSLOD=1.7357;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,1:36:25.54:0,26,777	0/1:16,1:15:18.74:19,0,371	0/0:103,0:11:12.02:0,12,142	0/0:143,0:18:17.12:0,17,217	0/0:33,4:34:5.45:0,5,100	0/1:31,3:28:99:102,0,491	0/1:24,4:25:68.13:68,0,443	0/0:30,0:19:23.78:0,24,322	0/1:9,4:11:88.19:103,0,88	0/1:48,13:58:99:260,0,1282	0/1:25,4:29:38.19:38,0,189	0/1:16,0:15:31.77:32,0,220	0/0:15,0:13:24.11:0,24,320	0/0:9,0:6:9.03:0,9,156	0/0:10,0:10:18.05:0,18,273	0/1:10,3:13:53.29:53,0,203	0/0:15,0:14:24.07:0,24,364	0/0:5,0:4:11.98:0,12,146	0/0:29,1:22:18.84:0,19,808	0/0:31,2:30:14.97:0,15,487	0/0:31,0:25:30.31:0,30,459	0/0:36,2:34:36.18:0,36,705	0/0:34,1:36:22.75:0,23,340	0/0:22,1:20:11.99:0,12,192	0/1:30,4:32:47.31:47,0,525	0/1:56,11:62:99:277,0,1333	0/0:3,0:3:6.01:0,6,89	0/1:10,2:12:46.10:46,0,295
chr10	102882210	.	TC	T	56.52	PASS	AB=0.942;AC=7;AF=0.125;AN=56;BaseQRankSum=7.054;DP=809;FS=0.692;HRun=2;HaplotypeScore=182.5587;InbreedingCoeff=-0.1577;MQ=42.00;MQ0=44;MQRankSum=-3.237;QD=0.36;ReadPosRankSum=1.882;VQSLOD=-0.5936;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:31:2.11:2,0,678	0/0:9,0:8:6.05:0,6,151	0/0:103,0:12:23.70:0,24,295	0/0:152,0:25:33.95:0,34,422	0/0:23,0:22:6.02:0,6,85	0/0:20,1:17:8.05:0,8,352	0/0:17,1:17:15.01:0,15,488	0/0:24,0:19:26.87:0,27,375	0/0:10,0:9:17.91:0,18,192	0/0:56,1:55:4.42:0,4,1126	0/0:22,0:24:15.47:0,15,180	0/1:14,0:14:3.33:3,0,169	0/1:12,2:12:17.91:18,0,233	0/0:4,0:4:9.02:0,9,115	0/0:11,0:10:17.98:0,18,258	0/0:14,0:14:23.65:0,24,312	0/0:17,2:17:5.33:0,5,449	0/1:7,0:6:19.84:20,0,155	0/0:22,0:18:45.14:0,45,625	0/0:23,1:21:18.90:0,19,290	0/0:34,0:32:23.36:0,23,317	0/0:28,0:26:30.10:0,30,422	0/0:26,0:26:14.35:0,14,208	0/0:18,0:17:23.25:0,23,277	0/1:28,1:27:2.54:3,0,302	0/1:50,0:48:90.32:90,0,951	0/1:2,1:3:31.95:32,0,34	0/0:12,0:12:1.42:0,1,281
chr10	102882211	.	C	CCT	784.98	PASS	AB=0.961;AC=16;AF=0.286;AN=56;BaseQRankSum=8.097;DP=779;FS=5.833;HRun=0;HaplotypeScore=187.8628;InbreedingCoeff=-0.2715;MQ=41.26;MQ0=44;MQRankSum=-4.527;QD=2.71;ReadPosRankSum=2.807;VQSLOD=2.1205;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,2:27:30.53:0,31,470	0/1:8,1:8:36.17:79,0,36	0/0:102,0:13:18.04:0,18,198	0/0:148,0:23:16.70:0,17,202	0/0:25,0:24:2.71:0,3,39	0/1:17,1:15:33.60:34,0,169	0/1:16,1:17:21.03:21,0,238	0/0:22,0:17:25.96:0,26,269	0/1:10,0:9:10.35:10,0,38	0/1:53,0:50:99:150,0,422	0/0:23,0:23:11.26:0,11,101	0/1:10,0:10:5.13:5,0,139	0/0:11,1:10:8.17:0,8,179	0/0:4,0:4:5.96:0,6,43	0/1:11,0:10:18.82:19,0,141	0/1:14,0:14:90.31:90,0,192	0/0:17,0:15:23.02:0,23,321	0/1:7,0:6:1.52:2,0,38	0/0:22,0:17:16.52:0,17,300	0/1:22,0:19:5:5,0,108	0/0:31,0:28:15.58:0,16,174	0/0:27,1:25:20.42:0,20,224	0/1:20,4:24:17.57:18,0,96	0/0:18,0:17:14.11:0,14,104	0/1:23,4:25:94:114,0,94	0/1:50,1:48:99:334,0,412	1/1:3,0:3:2.60:10,3,0	0/1:13,0:13:42.76:43,0,88
chr10	102882219	.	TCC	T	1059.18	PASS	AB=0.905;AC=14;AF=0.250;AN=56;BaseQRankSum=9.710;DP=742;FS=0.000;HRun=3;HaplotypeScore=168.3077;InbreedingCoeff=-0.3492;MQ=39.85;MQ0=49;MQRankSum=-5.339;QD=2.89;ReadPosRankSum=0.903;VQSLOD=-0.3334;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,2:29:38.12:0,38,730	0/1:7,1:8:6.02:56,0,6	0/1:92,3:11:1.82:2,0,180	0/0:141,2:25:4.30:0,4,206	0/0:22,3:22:1.20:0,1,55	0/1:14,0:13:44.79:45,0,238	0/1:17,1:17:13.19:13,0,335	0/0:22,0:19:19.22:0,19,330	0/1:7,4:10:17.96:76,0,18	0/1:38,10:44:99:405,0,585	0/1:20,3:23:49.03:49,0,176	0/0:10,1:10:2.02:0,2,219	0/0:10,0:8:16.53:0,17,250	0/0:3,0:3:6.43:0,6,44	0/0:11,0:10:25.26:0,25,335	0/1:11,3:14:56.27:56,0,273	0/0:19,0:18:17.90:0,18,422	0/0:7,0:6:14.50:0,14,124	0/0:19,1:15:0.55:0,1,373	0/1:19,1:16:28.13:28,0,148	0/0:34,0:29:19.69:0,20,293	0/0:18,2:18:20.60:0,21,321	0/1:19,2:20:30.06:30,0,116	0/0:14,1:15:16.47:0,16,175	0/1:19,5:22:78.53:79,0,157	0/1:43,5:45:99:289,0,463	0/1:5,0:5:27.08:27,0,40	0/1:15,0:14:49.91:50,0,168
chr10	102882292	.	CCTT	C	409.71	PASS	AB=0.862;AC=11;AF=0.196;AN=56;BaseQRankSum=6.858;DP=615;FS=2.146;HRun=0;HaplotypeScore=110.7757;InbreedingCoeff=-0.2500;MQ=34.88;MQ0=39;MQRankSum=-2.638;QD=2.17;ReadPosRankSum=-2.082;VQSLOD=1.6866;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,5:19:82.72:83,0,488	0/0:9,0:9:11.45:0,11,330	0/0:96,0:18:34.05:0,34,772	0/0:117,1:25:17.02:0,17,929	0/0:15,0:14:27.08:0,27,527	0/0:18,3:16:36.86:0,37,741	0/1:18,5:22:99:201,0,544	0/1:26,0:20:30.64:31,0,899	0/1:11,3:14:11.96:12,0,410	0/0:19,0:17:47.99:0,48,1096	0/0:7,0:7:14.84:0,15,286	0/0:15,0:13:36.10:0,36,707	0/1:14,1:12:43.89:44,0,453	0/1:8,2:10:11.34:11,0,404	0/1:7,3:9:0.21:0,0,350	0/0:9,0:9:24.03:0,24,472	0/1:16,7:20:66.15:66,0,604	0/1:9,0:8:27.83:28,0,412	0/1:13,1:12:30.06:30,0,411	0/0:7,0:8:18.39:0,18,252	0/0:20,1:21:40.41:0,40,762	0/0:13,0:10:15.04:0,15,267	0/0:15,2:18:27.71:0,28,444	0/1:14,6:18:43.98:44,0,63	0/0:13,1:14:33.11:0,33,718	0/0:25,0:24:52.94:0,53,1515	0/0:5,0:7:0.91:0,1,173	0/0:3,0:3:6.02:0,6,144
chr10	102882298	.	TC	T	799.11	PASS	AB=0.866;AC=15;AF=0.268;AN=56;BaseQRankSum=7.573;DP=618;FS=1.319;HRun=2;HaplotypeScore=100.9078;InbreedingCoeff=-0.2161;MQ=37.11;MQ0=44;MQRankSum=-2.790;QD=3.34;ReadPosRankSum=-2.256;VQSLOD=-0.5330;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,6:20:99:124,0,168	0/1:7,1:8:13.61:14,0,123	0/0:92,0:19:29.08:0,29,539	0/0:109,0:25:53.66:0,54,649	0/0:18,0:15:17.96:0,18,262	0/0:18,3:16:19.20:0,19,207	0/1:16,8:23:99:223,0,255	0/1:28,2:21:44.71:45,0,408	0/1:11,4:15:22.28:22,0,128	0/0:20,0:17:47.88:0,48,620	0/0:9,0:8:12.04:0,12,175	0/0:16,0:14:32.32:0,32,430	0/1:13,2:11:72.14:72,0,183	0/1:9,3:11:45.32:45,0,102	0/1:11,1:11:11.56:12,0,71	0/0:11,0:11:21.07:0,21,310	0/1:17,4:18:99:112,0,226	0/1:10,2:10:42.56:43,0,254	0/1:12,1:13:99:114,0,258	0/0:8,0:7:8.82:0,9,116	0/1:22,4:23:4.25:4,0,205	0/0:14,0:10:5.81:0,6,53	0/0:12,3:15:5.76:0,6,60	1/1:10,10:17:8.50:98,9,0	0/0:11,2:13:17.97:0,18,205	0/0:28,0:25:38.33:0,38,792	0/1:7,0:6:28.65:29,0,66	0/0:5,0:4:9.03:0,9,126
chr10	102882299	.	C	CT	1412.67	PASS	AB=0.861;AC=15;AF=0.268;AN=56;BaseQRankSum=5.798;DP=625;FS=0.000;HRun=1;HaplotypeScore=103.0062;InbreedingCoeff=-0.2159;MQ=35.56;MQ0=45;MQRankSum=-3.216;QD=5.84;ReadPosRankSum=-2.268;VQSLOD=-0.5169;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,5:20:99:224,0,166	0/1:7,1:8:32.84:33,0,118	0/0:91,0:19:34.46:0,34,542	0/0:108,0:25:53.32:0,53,639	0/0:18,0:16:18.04:0,18,232	0/0:20,1:16:19.05:0,19,174	0/1:22,2:23:99:340,0,184	0/1:26,6:23:99:124,0,372	0/1:15,0:15:23.21:23,0,131	0/0:21,0:18:48.11:0,48,618	0/0:9,0:8:12.04:0,12,164	0/0:14,1:14:33.08:0,33,433	0/1:13,2:11:99:124,0,173	0/1:11,1:11:55.69:71,0,56	0/1:8,4:11:37.10:37,0,71	0/0:12,0:12:21.07:0,21,292	0/1:14,5:16:99:125,0,179	0/1:11,1:10:63.29:63,0,208	0/1:11,4:14:99:171,0,244	0/0:7,1:7:9:0,9,97	0/1:24,2:23:1.67:2,0,164	0/0:12,3:11:5.81:0,6,53	0/0:15,0:15:5.47:0,5,59	1/1:18,2:17:8.41:93,8,0	0/0:14,0:14:17.97:0,18,200	0/0:28,0:26:24.10:0,24,778	0/1:5,2:7:62.13:140,0,62	0/0:5,0:4:9.03:0,9,119
chr10	102882818	.	A	AACACACACAC	2287.30	PASS	AB=0.849;AC=26;AF=0.591;AN=44;BaseQRankSum=3.467;DP=509;FS=3.508;HRun=0;HaplotypeScore=159.0294;InbreedingCoeff=0.6234;MQ=54.72;MQ0=14;MQRankSum=-5.564;QD=9.82;ReadPosRankSum=-2.612;VQSLOD=2.4064;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:6.02:123,6,0	1/1:8,2:9:15.05:530,15,0	./.	./.	0/0:10,0:11:17.60:0,18,653	1/1:13,0:16:3.01:88,3,0	1/1:20,0:20:6.02:124,6,0	1/1:29,0:29:15.94:271,16,0	1/1:9,3:12:2.92:17,3,0	0/0:36,0:36:47.28:0,47,1140	0/0:9,0:9:15.05:0,15,364	0/0:32,0:32:53.58:0,54,1610	1/1:16,6:22:20.43:691,20,0	1/1:26,1:26:9:287,9,0	1/1:10,0:10:5.61:54,6,0	0/1:22,0:28:38.36:38,0,850	0/0:10,0:12:12.01:0,12,114	1/1:0,0:5:3.01:104,3,0	1/1:13,0:14:6.01:67,6,0	0/1:7,0:10:0:0,0,0	0/0:10,0:9:3.01:0,3,89	./.	./.	./.	./.	0/0:27,0:27:21.35:0,21,1245	1/1:7,0:9:5.76:55,6,0	0/0:8,0:8:9.03:0,9,212
chr10	102882852	.	CG	C	926.36	PASS	AB=0.995;AC=22;AF=0.423;AN=52;BaseQRankSum=10.201;DP=526;FS=4.183;HRun=1;HaplotypeScore=159.9857;InbreedingCoeff=0.0211;MQ=53.92;MQ0=27;MQRankSum=-9.212;QD=3.98;ReadPosRankSum=-2.508;VQSLOD=-0.6000;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,2:19:14.96:139,15,0	0/1:13,0:12:59.88:60,0,110	0/0:37,0:16:46.30:0,46,647	0/0:44,0:27:61.29:0,61,831	0/0:21,0:20:54.15:0,54,807	0/1:16,0:16:11.18:62,0,11	1/1:14,2:15:20.49:184,20,0	0/1:19,0:17:99:137,0,206	0/1:15,0:15:24.21:84,0,24	0/0:40,0:40:99:0,114,1673	0/0:13,0:13:39.13:0,39,604	0/0:37,0:37:99:0,105,1597	0/1:15,1:14:40.93:88,0,41	0/1:19,0:18:14.01:97,0,14	0/1:12,0:10:14.78:15,0,17	0/0:34,0:34:65.05:0,65,1168	0/1:9,0:9:1.32:1,0,143	0/1:3,0:3:13.08:14,0,13	0/1:12,0:11:60.04:60,0,96	./.	0/0:12,1:9:3.41:0,3,42	0/1:13,0:13:16.03:16,0,20	./.	1/1:17,0:16:1.67:21,2,0	1/1:13,0:12:2.98:22,3,0	0/0:35,0:35:99:0,100,1430	1/1:11,0:11:5.30:88,5,0	0/1:5,0:5:0.79:1,0,87
chr10	102885432	.	AG	A	740.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.043;DP=581;FS=5.284;HRun=3;HaplotypeScore=80.8535;InbreedingCoeff=0.9912;MQ=80.10;MQ0=0;MQRankSum=-3.297;QD=29.60;ReadPosRankSum=3.536;VQSLOD=3.2802;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1464	0/0:14,0:14:42.14:0,42,600	0/0:14,0:14:42.03:0,42,570	0/0:19,0:19:48.14:0,48,645	0/0:23,0:23:63.17:0,63,867	0/0:19,0:19:48.16:0,48,691	0/0:23,0:23:69.23:0,69,986	0/0:22,0:22:57.18:0,57,805	0/0:24,0:24:72.19:0,72,970	0/0:22,0:22:63.19:0,63,888	0/0:15,0:15:45.12:0,45,605	0/0:20,0:20:60.20:0,60,862	0/0:14,0:14:42.13:0,42,586	0/0:25,0:25:75.25:0,75,1072	0/0:25,0:25:72.23:0,72,1021	0/0:18,0:18:54.18:0,54,776	1/1:1,24:25:72.21:835,72,0	0/0:29,0:29:87.28:0,87,1234	0/0:16,0:16:48.12:0,48,617	0/0:25,0:25:72.20:0,72,978	0/0:34,0:34:93.31:0,93,1338	0/0:16,0:16:45.15:0,45,647	0/0:11,0:11:30.10:0,30,426	0/0:25,0:25:72.23:0,72,1019	0/0:11,0:11:33.10:0,33,458	0/0:22,0:22:66.22:0,66,950	0/0:28,0:28:81.27:0,81,1165	0/0:6,0:6:18.06:0,18,259
chr10	102886150	.	A	AT	5037.65	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-13.628;DP=626;FS=9.272;HRun=7;HaplotypeScore=59.1301;InbreedingCoeff=0.9925;MQ=70.84;MQ0=1;MQRankSum=-0.055;QD=31.49;ReadPosRankSum=-0.727;VQSLOD=4.3206;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.07:0,63,601	0/0:12,0:12:30.01:0,30,281	0/0:26,0:22:11.48:0,11,369	0/0:29,0:22:41.73:0,42,403	0/0:24,0:24:60.07:0,60,569	0/0:27,0:27:78.09:0,78,741	0/0:17,0:17:51.08:0,51,491	1/1:3,30:32:90.25:1061,90,0	0/0:22,0:22:54.07:0,54,521	0/0:29,0:29:81.13:0,81,782	0/0:14,0:14:42.07:0,42,405	0/0:25,0:25:66.09:0,66,632	0/0:14,0:14:42.07:0,42,405	0/0:20,0:20:60.07:0,60,568	1/1:3,19:22:57.17:689,57,0	0/0:20,0:20:54.08:0,54,521	0/0:23,0:23:69.11:0,69,666	0/0:25,0:25:66.08:0,66,631	1/1:1,24:25:72.22:865,72,0	1/1:3,31:34:93.21:1090,93,0	1/1:3,10:13:30.09:362,30,0	0/0:31,0:31:75.10:0,75,719	0/0:21,0:21:60.09:0,60,579	0/0:13,0:13:35.42:0,35,327	0/0:19,0:19:51.08:0,51,492	0/0:20,0:20:39.05:0,39,377	1/1:3,30:33:81.24:971,81,0	0/0:11,0:11:27.03:0,27,261
chr10	102887652	.	TC	T	6222.40	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=16.494;DP=750;FS=3.184;HRun=3;HaplotypeScore=79.7518;InbreedingCoeff=0.9994;MQ=80.80;MQ0=0;MQRankSum=-6.463;QD=34.57;ReadPosRankSum=-1.462;VQSLOD=4.7747;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,138,1983	0/0:8,0:8:24.08:0,24,346	0/0:22,0:22:60.17:0,60,828	0/0:21,0:21:60.20:0,60,840	0/0:31,0:31:93.30:0,93,1314	0/0:21,0:21:60.19:0,60,844	0/0:36,0:36:99:0,108,1531	1/1:0,31:31:93.28:1140,93,0	0/0:25,0:25:69.21:0,69,974	0/0:26,0:26:72.24:0,72,1037	0/0:17,0:17:48.16:0,48,683	0/0:30,0:30:90.30:0,90,1294	0/0:23,0:23:69.23:0,69,991	0/0:17,0:17:51.16:0,51,715	1/1:2,28:30:84.26:1041,84,0	0/0:32,0:32:96.31:0,96,1365	0/0:34,0:34:99:0,102,1467	0/0:26,0:26:75.24:0,75,1062	1/1:2,19:21:57.17:695,57,0	1/1:0,25:25:72.23:892,72,0	1/1:2,44:46:99:1525,123,0	0/0:19,0:19:57.19:0,57,821	0/0:30,0:30:84.27:0,84,1190	0/0:39,0:39:99:0,114,1642	0/0:28,0:28:84.25:0,84,1161	0/0:26,0:26:75.23:0,75,1028	1/1:0,27:27:75.24:929,75,0	0/0:9,0:9:27.08:0,27,369
chr10	102888739	.	CACACAG	C	465.81	PASS	AB=0.954;AC=6;AF=0.115;AN=52;BaseQRankSum=5.920;DP=1264;FS=2.838;HRun=0;HaplotypeScore=196.8815;InbreedingCoeff=-0.1368;MQ=36.37;MQ0=221;MQRankSum=-1.735;QD=1.63;ReadPosRankSum=-4.543;VQSLOD=1.1283;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:69,0:51:65.83:0,66,762	0/0:18,0:12:10.85:0,11,113	./.	./.	0/0:24,0:17:27.81:0,28,342	0/0:36,0:29:7.75:0,8,245	0/0:86,0:57:46.32:0,46,573	0/0:47,0:22:30.71:0,31,174	0/0:59,0:45:47.33:0,47,683	0/0:73,0:46:79.79:0,80,796	0/0:34,0:25:28.69:0,29,530	0/0:53,0:34:21.07:0,21,740	0/0:50,0:34:46.11:0,46,564	0/0:54,0:43:44.71:0,45,761	0/0:56,0:38:36.73:0,37,428	0/0:50,0:38:50.44:0,50,630	0/1:55,0:40:23.32:23,0,354	0/0:49,0:37:52.49:0,52,935	0/1:27,0:20:32.93:33,0,211	0/1:27,1:14:55.44:55,0,103	0/1:132,1:93:99:402,0,190	0/0:41,0:31:22.53:0,23,303	0/0:21,0:15:11.60:0,12,207	0/0:58,0:46:35.42:0,35,619	0/0:35,0:28:24.10:0,24,551	0/0:65,0:36:77:0,77,880	0/1:16,7:20:27.30:58,0,27	0/1:19,0:15:16.96:17,0,392
chr10	102888745	.	GAC	G	281.31	PASS	AB=0.969;AC=14;AF=0.269;AN=52;BaseQRankSum=3.268;DP=1205;FS=5.263;HRun=0;HaplotypeScore=152.7646;InbreedingCoeff=-0.2353;MQ=36.66;MQ0=197;MQRankSum=0.405;QD=0.45;ReadPosRankSum=-0.469;VQSLOD=2.0921;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:66,2:51:27.66:28,0,285	0/0:16,0:10:5.82:0,6,81	./.	./.	0/1:24,0:18:56.85:57,0,174	0/1:32,1:26:19.25:19,0,162	0/1:83,0:55:8.62:9,0,365	0/0:46,0:22:9.44:0,9,104	0/0:53,2:45:0.13:0,0,378	0/0:65,1:46:19.31:0,19,274	0/0:29,0:21:8.45:0,8,365	0/1:50,1:34:13.69:14,0,366	0/1:43,1:31:20.16:20,0,277	0/0:53,0:43:32.64:0,33,472	0/1:41,9:35:39.96:85,0,40	0/1:49,2:38:69.15:69,0,245	0/0:52,0:41:32.60:0,33,327	0/0:46,2:38:26.13:0,26,633	0/0:29,0:23:7.54:0,8,39	1/1:23,0:12:2.59:10,3,0	0/1:126,0:93:1.64:2,0,60	0/0:36,0:27:15.05:0,15,223	0/0:20,0:16:17.85:0,18,229	0/0:54,0:42:20.46:0,20,285	0/1:29,2:27:93.38:93,0,285	0/0:62,0:35:27.97:0,28,470	0/1:20,0:17:2.39:2,0,20	0/1:20,0:16:11.44:11,0,123
chr10	102888924	.	G	GACA	5167.64	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-8.649;DP=524;FS=6.842;HRun=0;HaplotypeScore=74.6885;InbreedingCoeff=0.9984;MQ=88.11;MQ0=0;MQRankSum=-2.629;QD=50.66;ReadPosRankSum=-1.692;VQSLOD=6.5582;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1820	0/0:7,0:7:21.07:0,21,350	0/0:22,0:22:55.69:0,56,849	0/0:21,0:21:51.04:0,51,772	0/0:19,0:19:57.18:0,57,921	0/0:14,0:14:39.13:0,39,645	0/0:20,0:20:57.15:0,57,873	1/1:4,11:17:45.13:889,45,0	0/0:17,0:17:48.16:0,48,799	0/0:23,0:23:60.20:0,60,966	0/0:9,0:9:24.07:0,24,376	0/0:21,0:21:63.22:0,63,1049	0/0:18,0:18:51.17:0,51,836	0/0:17,0:17:48.13:0,48,731	1/1:0,15:15:42.14:951,42,0	0/0:19,0:19:48.16:0,48,799	0/0:31,0:31:81.21:0,81,1262	0/0:22,0:22:54.18:0,54,889	1/1:1,9:11:33.08:659,33,0	1/1:3,14:18:36.08:765,36,0	1/1:3,25:29:55.13:1225,55,0	0/0:26,0:26:72.22:0,72,1150	0/0:19,0:19:57.18:0,57,925	0/0:19,0:19:54.18:0,54,893	0/0:15,0:15:42.10:0,42,642	0/0:13,0:13:30.10:0,30,500	1/1:2,9:11:30.10:678,30,0	0/0:12,0:12:36.12:0,36,599
chr10	102896561	.	ATG	A	2219.85	PASS	AB=0.911;AC=16;AF=0.296;AN=54;BaseQRankSum=5.616;DP=1020;FS=35.098;HRun=0;HaplotypeScore=125.2983;InbreedingCoeff=0.3038;MQ=45.24;MQ0=102;MQRankSum=3.815;QD=5.58;ReadPosRankSum=1.916;VQSLOD=1.6162;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,1:40:31.55:0,32,910	0/0:14,0:11:16.08:0,16,378	./.	0/0:74,0:7:3.89:0,4,35	0/0:28,0:25:30.09:0,30,447	0/1:26,1:21:3.04:3,0,399	0/0:54,2:50:5.83:0,6,1020	0/1:53,5:37:20.50:329,0,21	0/1:29,0:29:59.15:59,0,471	0/0:49,1:34:22.34:0,22,739	0/1:14,1:13:6.08:6,0,401	0/0:39,0:31:35.37:0,35,802	0/1:25,1:22:16.83:17,0,213	0/0:26,0:22:9.82:0,10,511	1/1:18,10:25:23.95:298,24,0	0/0:26,0:24:39.98:0,40,575	0/0:45,1:38:19.12:0,19,1121	0/0:28,0:21:34.36:0,34,520	1/1:25,15:23:18.79:315,19,0	0/1:15,10:25:4.07:349,0,4	1/1:61,40:81:27.39:693,27,0	0/0:23,0:21:0.19:0,0,461	0/1:25,1:25:3.06:3,0,376	0/0:62,1:53:42.47:0,42,1009	0/0:27,0:22:29.67:0,30,467	0/0:37,0:22:23.24:0,23,501	1/1:4,6:10:24.07:287,24,0	0/1:8,2:7:30.13:30,0,42
chr10	102896718	.	GTGTGTGTA	G	2854.86	PASS	AB=0.932;AC=26;AF=0.464;AN=56;BaseQRankSum=1.833;DP=759;FS=0.000;HRun=0;HaplotypeScore=181.7303;InbreedingCoeff=0.3634;MQ=44.41;MQ0=79;MQRankSum=1.403;QD=6.36;ReadPosRankSum=2.080;VQSLOD=2.5901;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:29:2.88:227,3,0	1/1:7,1:8:11.96:95,12,0	0/0:25,0:15:30.98:0,31,356	0/0:27,0:13:4.19:0,4,270	0/0:22,0:22:51.51:0,52,406	1/1:21,0:19:14.50:154,15,0	0/1:41,0:34:65.08:323,0,65	0/0:36,0:28:35.47:0,35,301	1/1:27,0:28:13.38:211,13,0	0/0:29,0:24:50.94:0,51,489	0/0:13,0:13:9.42:0,9,306	0/1:28,0:23:9.19:9,0,335	0/1:15,17:27:55.67:64,0,56	1/1:20,0:18:26.48:206,26,0	0/0:24,0:19:29.99:0,30,305	0/0:17,0:17:2:0,2,130	0/1:40,0:30:99:111,0,180	1/1:20,0:16:6.25:280,6,0	0/1:20,0:11:12.40:12,0,142	0/1:18,0:16:34.46:34,0,191	0/0:61,0:36:29.17:0,29,189	1/1:21,0:18:14.95:245,15,0	0/1:17,2:17:1.08:126,0,1	1/1:51,0:46:49.70:601,50,0	1/1:18,0:13:26.98:319,27,0	0/0:31,0:28:23.20:0,23,420	0/1:22,0:18:30.13:30,0,136	0/0:17,0:11:23.94:0,24,257
chr10	102897610	.	G	GAC	1360.78	PASS	AB=0.892;AC=22;AF=0.423;AN=52;BaseQRankSum=-4.172;DP=637;FS=9.451;HRun=0;HaplotypeScore=93.9155;InbreedingCoeff=0.2188;MQ=62.11;MQ0=8;MQRankSum=0.797;QD=3.91;ReadPosRankSum=0.536;VQSLOD=1.7880;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:50.47:158,0,50	0/1:9,3:13:6.88:80,0,7	./.	./.	1/1:10,0:10:5.99:48,6,0	0/1:18,2:21:85.50:190,0,85	1/1:19,15:34:15.05:222,15,0	0/1:30,0:30:0.16:0,0,0	0/0:15,0:21:8.42:0,8,41	0/0:15,0:18:6.31:0,6,41	0/0:14,0:14:8.98:0,9,74	0/0:11,0:12:5.85:0,6,46	1/1:10,4:15:5.65:88,6,0	0/1:18,7:26:26.44:39,0,26	0/0:13,0:19:7.60:0,8,60	0/1:19,1:24:17.71:18,0,188	0/0:21,0:39:25.56:0,26,125	0/1:25,5:30:95.04:301,0,95	0/0:18,0:18:3.44:0,3,20	0/0:6,0:13:8.52:0,9,42	0/0:34,0:49:8.52:0,9,42	1/1:12,0:12:5.99:50,6,0	0/1:12,2:14:35.01:35,0,35	1/1:29,14:45:14.85:203,15,0	1/1:14,4:17:6.02:89,6,0	1/1:21,0:20:0.47:1,0,0	0/0:8,0:10:11.03:0,11,50	0/0:11,0:10:8.23:0,8,72
chr10	102898386	.	GCA	G	8746.98	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.785;DP=1120;FS=15.666;HRun=0;HaplotypeScore=148.9558;InbreedingCoeff=0.9999;MQ=58.91;MQ0=11;MQRankSum=-1.737;QD=32.28;ReadPosRankSum=0.229;VQSLOD=5.6108;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:98.39:0,98,1667	0/0:14,0:14:36.12:0,36,617	0/0:50,0:27:69.21:0,69,1104	0/0:58,0:35:84.04:0,84,1330	0/0:26,0:26:66.23:0,66,1123	0/0:27,0:27:72.25:0,72,1235	0/0:38,0:38:96:0,96,1659	1/1:5,34:39:98.51:1241,99,0	0/0:49,0:49:99:0,135,2288	0/0:51,0:51:99:0,151,2572	0/0:28,0:28:78.25:0,78,1301	0/0:54,0:54:99:0,157,2644	0/0:38,0:38:99:0,111,1875	0/0:38,0:38:93.30:0,93,1561	1/1:3,55:56:99:1893,144,0	0/0:54,0:54:99:0,147,2493	0/0:38,0:38:96.31:0,96,1600	0/0:34,0:34:63.94:0,64,1081	1/1:4,20:24:60.19:789,60,0	1/1:3,36:38:93.30:1223,93,0	1/1:3,76:79:99:2576,199,0	0/0:43,0:43:99:0,126,2148	0/0:29,0:29:73.99:0,74,1371	0/0:39,1:40:71.74:0,72,1799	0/0:38,0:38:99:0,111,1894	0/0:41,0:41:99:0,108,1836	1/1:3,29:31:78.25:1025,78,0	0/0:16,0:16:33.11:0,33,556
chr10	102900441	.	A	AC	1952.49	PASS	AB=0.743;AC=6;AF=0.107;AN=56;BaseQRankSum=3.493;DP=629;FS=13.145;HRun=0;HaplotypeScore=101.2543;InbreedingCoeff=-0.1202;MQ=59.18;MQ0=11;MQRankSum=-5.015;QD=13.56;ReadPosRankSum=0.461;VQSLOD=4.2756;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:83.25:0,83,1070	0/0:8,0:8:24.07:0,24,320	0/0:36,0:19:43.44:0,43,446	0/0:32,0:12:23.88:0,24,262	0/0:19,0:19:57.17:0,57,764	0/0:19,0:18:54.15:0,54,694	0/0:16,0:16:48.14:0,48,639	0/1:28,3:31:99:115,0,824	0/0:13,0:13:39.12:0,39,529	0/0:26,0:26:69.14:0,69,896	0/0:21,0:21:63.19:0,63,850	0/0:24,0:24:69.22:0,69,946	0/0:13,0:13:39.11:0,39,515	0/0:16,0:16:48.13:0,48,636	0/1:13,12:25:99:441,0,384	0/0:19,0:19:54.16:0,54,723	0/0:26,0:26:74.97:0,75,924	0/0:30,0:30:87.29:0,87,1214	0/1:18,8:25:99:333,0,430	0/1:13,14:27:99:691,0,207	0/1:7,3:9:99:131,0,142	0/0:17,0:17:48.15:0,48,656	0/0:24,0:23:66.20:0,66,901	0/0:20,0:20:59.76:0,60,758	0/0:28,0:28:81.26:0,81,1117	0/0:35,0:33:95.31:0,95,1255	0/1:13,12:25:99:366,0,308	0/0:13,0:12:36.12:0,36,503
chr10	102900446	.	CA	C	2163.95	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.940;DP=614;FS=0.000;HRun=9;HaplotypeScore=100.1030;InbreedingCoeff=0.9949;MQ=58.44;MQ0=10;MQRankSum=-5.576;QD=15.46;ReadPosRankSum=-0.526;VQSLOD=3.4344;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:62.37:0,62,835	0/0:8,0:8:24.06:0,24,268	0/0:34,0:17:22.84:0,23,287	0/0:28,0:12:25.18:0,25,216	0/0:19,0:19:51.14:0,51,579	0/0:16,0:15:45.13:0,45,519	0/0:17,0:17:51.14:0,51,578	1/1:13,18:31:61.79:554,62,0	0/0:13,0:13:30.08:0,30,332	0/0:24,0:24:69.20:0,69,796	0/0:21,0:21:54.16:0,54,623	0/0:23,0:24:66.03:0,66,739	0/0:12,0:12:36.11:0,36,415	0/0:16,0:16:45.13:0,45,519	1/1:11,16:27:63.50:476,64,0	0/0:19,0:19:51.14:0,51,579	0/0:26,0:26:75.16:0,75,836	0/0:31,0:31:83.92:0,84,943	1/1:16,9:24:37.90:292,38,0	1/1:14,10:24:57.79:400,58,0	1/1:5,5:9:15:137,15,0	0/0:17,0:17:25.08:0,25,433	0/0:21,0:22:53.96:0,54,582	0/0:23,0:23:56.92:0,57,615	0/0:27,0:27:78.23:0,78,900	0/0:34,0:32:68.83:0,69,1046	1/1:15,8:23:62.31:493,62,0	0/0:13,0:12:36.11:0,36,415
chr10	102900447	.	A	AAAAAAAAC	4353.45	PASS	AB=0.867;AC=7;AF=0.125;AN=56;BaseQRankSum=8.704;DP=620;FS=0.000;HRun=0;HaplotypeScore=179.6901;InbreedingCoeff=0.1382;MQ=59.31;MQ0=10;MQRankSum=-7.032;QD=30.88;ReadPosRankSum=-3.512;VQSLOD=3.6186;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:71.51:0,72,1730	0/0:8,0:8:24.07:0,24,573	0/0:35,0:18:22.28:0,22,432	0/0:29,0:12:9.29:0,9,310	0/0:20,0:20:51.16:0,51,1042	0/0:16,0:15:45.15:0,45,1104	0/0:19,0:19:51.15:0,51,1073	0/1:31,0:31:47.01:265,0,47	0/0:11,0:11:30.09:0,30,681	0/0:24,0:24:69.23:0,69,1452	0/0:20,0:20:57.19:0,57,1319	0/0:24,0:24:66.22:0,66,1436	0/0:13,0:13:36.12:0,36,851	0/0:16,0:16:45.15:0,45,1050	0/1:21,6:27:76.33:1029,0,76	0/0:20,0:20:51.15:0,51,1003	0/0:27,0:27:75.18:0,75,1360	0/0:32,0:32:84.27:0,84,1949	1/1:23,2:24:4.36:729,4,0	0/1:17,7:24:8.54:1241,0,9	0/1:11,0:10:18.35:44,0,18	0/0:16,0:16:13.19:0,13,915	0/0:23,0:22:54.17:0,54,1294	0/0:24,0:24:17.80:0,18,1132	0/0:28,0:28:78.27:0,78,1877	0/0:35,0:33:68.87:0,69,2110	0/1:15,8:23:34.07:1045,0,34	0/0:13,0:12:36.12:0,36,832
chr10	102903592	.	C	CAG	860.01	PASS	AB=0.795;AC=4;AF=0.077;AN=52;BaseQRankSum=-3.892;DP=776;FS=15.595;HRun=0;HaplotypeScore=135.8218;InbreedingCoeff=-0.0870;MQ=52.19;MQ0=16;MQRankSum=-4.645;QD=5.70;ReadPosRankSum=-3.537;VQSLOD=1.7027;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:39:83.24:0,83,1113	0/0:11,0:11:33.11:0,33,470	./.	./.	0/0:25,0:25:66.21:0,66,922	0/0:23,0:23:62.11:0,62,796	0/0:28,0:26:66.22:0,66,945	0/1:38,20:45:99:683,0,865	0/0:35,0:35:70.16:0,70,949	0/0:30,0:29:78.24:0,78,1080	0/0:28,0:28:69.23:0,69,987	0/0:22,0:22:63.20:0,63,870	0/0:24,0:24:69.22:0,69,954	0/0:30,0:30:84.28:0,84,1200	0/1:25,7:28:67.38:67,0,430	0/0:29,0:29:81.27:0,81,1148	0/0:33,0:32:86.30:0,86,1189	0/0:30,0:30:68.53:0,69,1138	0/1:21,5:18:99:120,0,437	0/1:25,10:32:98.44:98,0,461	0/0:19,9:24:15.48:0,15,211	0/0:27,0:26:60.20:0,60,856	0/0:30,0:29:81.25:0,81,1134	0/0:48,0:48:99:0,111,1552	0/0:21,0:21:54.18:0,54,766	0/0:30,0:29:47.28:0,47,1042	0/0:27,5:28:8.18:0,8,779	0/0:13,0:13:33.06:0,33,427
chr10	102903720	.	GGGAC	G	1754.02	PASS	AB=0.995;AC=19;AF=0.339;AN=56;BaseQRankSum=17.218;DP=761;FS=3.439;HRun=0;HaplotypeScore=195.2129;InbreedingCoeff=0.3848;MQ=62.13;MQ0=12;MQRankSum=1.470;QD=6.29;ReadPosRankSum=2.135;VQSLOD=2.9080;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,1:29:7.29:165,7,0	0/1:8,0:8:27.42:52,0,27	0/0:43,0:20:22.58:0,23,1113	0/0:55,0:30:18.43:0,18,976	0/0:36,0:36:99:0,108,3078	0/1:15,0:15:8.72:125,0,9	0/1:17,0:17:85.42:85,0,118	0/0:45,0:44:99:0,132,3578	0/1:17,0:17:13.20:54,0,13	0/0:29,0:29:87.30:0,87,2428	0/0:34,0:34:99:0,99,2740	0/0:23,0:23:69.24:0,69,1967	0/1:19,0:19:6.80:124,0,7	1/1:19,0:19:47.97:274,48,0	0/0:32,0:31:75.21:0,75,1970	0/0:25,0:25:72.25:0,72,2043	1/1:24,1:25:4.41:195,4,0	0/1:26,0:26:29.12:29,0,42	0/0:23,0:23:69.24:0,69,1893	0/0:15,0:15:45.13:0,45,1142	0/0:34,0:31:90.31:0,90,2409	0/1:26,1:27:9.98:246,0,10	1/1:22,2:24:6.85:144,7,0	1/1:35,0:35:42.60:218,43,0	1/1:18,0:18:1.33:223,1,0	0/0:31,0:31:93.32:0,93,2642	0/0:34,0:32:96.33:0,96,2705	0/0:22,0:22:66.23:0,66,1823
chr10	102903724	.	C	CAG	9466.95	PASS	AB=0.615;AC=25;AF=0.446;AN=56;BaseQRankSum=17.488;DP=778;FS=0.657;HRun=0;HaplotypeScore=157.1718;InbreedingCoeff=0.8601;MQ=63.40;MQ0=12;MQRankSum=-4.972;QD=31.04;ReadPosRankSum=2.705;VQSLOD=6.6946;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:31:30.30:769,30,0	1/1:4,8:12:1.26:329,1,0	0/0:41,0:20:40.88:0,41,636	0/0:56,0:33:0.06:0,0,552	0/0:35,0:35:99:0,105,1607	1/1:2,14:16:25.16:713,25,0	0/1:9,14:24:31.34:346,0,31	0/0:46,0:45:99:0,126,1796	1/1:2,16:19:42.07:737,42,0	0/0:29,0:29:81.25:0,81,1180	0/0:35,0:35:99:0,102,1508	0/0:23,0:23:69.23:0,69,1054	1/1:6,15:21:42.13:704,42,0	1/1:0,18:18:54.12:930,54,0	0/0:29,0:28:66.22:0,66,1001	0/0:25,0:25:72.21:0,72,1056	1/1:4,20:24:39.52:916,40,0	1/1:2,26:28:25.23:844,25,0	0/0:21,0:21:63.19:0,63,940	0/0:17,0:17:47.99:0,48,656	0/0:30,0:27:78.26:0,78,1191	1/1:4,24:28:36.02:758,36,0	1/1:6,22:28:54.08:885,54,0	1/1:6,30:37:54.65:1012,55,0	1/1:4,15:19:22.70:524,23,0	0/0:30,0:30:90.31:0,90,1378	0/0:34,0:32:96.31:0,96,1442	0/0:22,0:22:62.87:0,63,952
chr10	102904149	.	CA	C	3811.96	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.348;DP=614;FS=3.257;HRun=7;HaplotypeScore=67.4388;InbreedingCoeff=0.9978;MQ=77.83;MQ0=0;MQRankSum=-2.968;QD=27.42;ReadPosRankSum=-0.715;VQSLOD=4.1620;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.26:0,81,1014	0/0:13,0:13:36.12:0,36,453	0/0:21,0:22:56.65:0,57,651	0/0:10,0:10:21:0,21,238	0/0:40,0:40:99:0,111,1383	0/0:15,0:15:36.11:0,36,450	0/0:16,0:16:36.12:0,36,453	1/1:2,25:27:75.14:752,75,0	0/0:19,0:19:51.16:0,51,642	0/0:27,0:27:78.24:0,78,970	0/0:20,0:20:57.17:0,57,706	0/0:18,0:18:45.14:0,45,566	0/0:19,0:19:57.18:0,57,717	0/0:25,0:25:69.21:0,69,855	1/1:3,21:24:60.14:612,60,0	0/0:28,0:28:81.24:0,81,995	0/0:25,0:25:69.22:0,69,868	0/0:14,0:14:39.12:0,39,489	1/1:1,16:17:48.11:490,48,0	1/1:2,19:21:60.14:612,60,0	1/1:2,19:21:51.11:520,51,0	0/0:23,0:23:63.19:0,63,780	0/0:35,0:35:96.27:0,96,1169	0/0:7,0:7:21.06:0,21,252	0/0:28,0:28:72.22:0,72,885	0/0:32,0:32:87.27:0,87,1081	1/1:2,27:29:81.18:826,81,0	0/0:11,0:11:24.08:0,24,302
chr10	102904779	.	T	TATA	1682.55	PASS	AB=0.725;AC=26;AF=0.619;AN=42;BaseQRankSum=-3.883;DP=225;FS=13.084;HRun=0;HaplotypeScore=35.0741;InbreedingCoeff=0.3832;MQ=73.53;MQ0=1;MQRankSum=-0.493;QD=15.16;ReadPosRankSum=-2.054;VQSLOD=1.2332;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,4:13:9.03:172,9,0	1/1:3,3:6:6.02:115,6,0	./.	./.	./.	1/1:3,3:6:6.91:116,7,0	1/1:3,1:4:3.01:57,3,0	0/0:26,0:25:1.76:0,2,7	1/1:6,1:8:7.27:118,7,0	1/1:4,2:6:6.02:115,6,0	0/1:4,3:7:30.28:106,0,30	0/0:9,0:9:9.03:0,9,114	1/1:1,3:4:9.03:172,9,0	1/1:1,0:2:3.01:39,3,0	1/1:4,0:4:6.01:85,6,0	0/0:8,0:8:3.01:0,3,39	1/1:10,0:17:6.02:76,6,0	0/1:12,6:18:18.24:323,0,18	0/0:8,0:9:2.98:0,3,21	0/0:4,0:6:5.94:0,6,41	0/0:7,0:10:8.93:0,9,63	./.	./.	1/1:4,0:4:3.01:43,3,0	1/1:4,7:12:15.05:287,15,0	./.	./.	0/0:9,0:9:2.82:0,3,181
chr10	102905779	.	C	CTGTGTG	5125.51	PASS	AB=0.746;AC=37;AF=0.685;AN=54;BaseQRankSum=2.187;DP=993;FS=4.005;HRun=0;HaplotypeScore=261.0002;InbreedingCoeff=0.6519;MQ=57.90;MQ0=10;MQRankSum=-6.940;QD=7.37;ReadPosRankSum=-3.846;VQSLOD=2.8483;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,22:66:2.86:40,3,0	1/1:7,0:16:6.02:76,6,0	1/1:40,0:25:0.47:1,0,0	./.	0/0:19,0:17:29.82:0,30,479	1/1:16,4:20:3.01:90,3,0	1/1:29,10:43:8.71:215,9,0	1/1:41,0:40:39.61:365,40,0	1/1:27,20:53:16.26:761,16,0	0/0:54,0:54:50.87:0,51,819	0/0:26,0:28:46.20:0,46,747	0/0:47,0:53:90.82:0,91,1469	1/1:23,3:40:27.09:548,27,0	1/1:11,9:22:4.26:190,4,0	1/1:41,0:44:14.55:332,15,0	0/0:36,0:38:69.57:0,70,1219	1/1:15,1:33:17.99:373,18,0	1/1:11,10:24:24.08:746,24,0	1/1:25,0:24:17.41:221,17,0	1/1:23,1:22:11.71:159,12,0	0/1:57,0:56:43:70,0,43	0/1:8,9:20:0.17:1,0,0	1/1:15,9:26:3.01:39,3,0	1/1:28,14:45:6.02:194,6,0	0/1:11,12:30:2.96:221,0,3	0/0:40,0:44:58.99:0,59,1029	1/1:25,0:25:22.35:485,22,0	0/0:10,0:12:18.02:0,18,250
chr10	102905814	.	T	TGTGTGCGC	4462.51	PASS	AB=1.000;AC=21;AF=0.389;AN=54;BaseQRankSum=10.924;DP=808;FS=2.963;HRun=0;HaplotypeScore=252.2747;InbreedingCoeff=0.1487;MQ=50.71;MQ0=6;MQRankSum=-7.273;QD=9.43;ReadPosRankSum=-0.726;VQSLOD=3.3134;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:21.66:0,22,553	0/1:15,0:15:5.12:5,0,139	0/0:3,0:2:2.74:0,3,12	./.	0/0:28,0:28:65.17:0,65,1047	0/1:20,0:20:2.89:3,0,411	0/1:44,0:44:80.19:80,0,853	1/1:33,0:32:59.64:580,60,0	0/1:41,0:41:99:273,0,347	0/0:44,0:43:99:0,108,2001	0/0:25,0:25:66.20:0,66,1349	0/0:52,0:52:99:0,119,2562	0/1:33,0:33:99:236,0,261	0/1:20,0:20:89.94:90,0,297	1/1:24,1:30:37.18:560,37,0	0/0:35,0:35:93.11:0,93,1791	0/1:23,0:23:99:186,0,249	0/1:22,0:22:99:372,0,307	1/1:27,0:26:59.06:654,59,0	1/1:29,2:29:17.82:340,18,0	0/1:42,0:39:22.06:168,0,22	0/0:18,0:18:11.67:0,12,188	0/0:24,0:23:10.60:0,11,380	0/1:42,0:42:47.33:47,0,450	0/1:29,0:29:74.01:74,0,311	0/0:33,0:33:83.02:0,83,1697	1/1:16,3:21:31.97:793,32,0	0/0:12,0:12:29.99:0,30,580
chr10	102905827	.	A	ACG	2468.99	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=4.627;DP=683;FS=7.304;HRun=0;HaplotypeScore=148.3651;InbreedingCoeff=0.8879;MQ=57.95;MQ0=1;MQRankSum=-4.346;QD=17.39;ReadPosRankSum=-4.463;VQSLOD=2.0627;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:48.16:0,48,725	0/0:14,0:14:27.09:0,27,388	0/0:11,0:9:17.64:0,18,214	0/1:12,0:10:0.01:0,0,155	0/0:22,0:22:51.16:0,51,753	0/0:17,0:17:42.13:0,42,617	0/0:39,0:39:86.09:0,86,1309	1/1:3,17:20:48.04:607,48,0	0/0:34,0:34:55.22:0,55,771	0/0:37,0:37:96.32:0,96,1436	0/0:22,0:22:63.19:0,63,916	0/0:45,0:45:99:0,111,1668	0/0:28,0:28:41.79:0,42,717	0/0:20,0:20:45.12:0,45,627	1/1:3,22:25:35.38:474,35,0	0/0:25,0:25:75.21:0,75,1052	0/0:27,0:27:56.33:0,56,757	0/0:24,0:24:59.36:0,59,785	1/1:1,20:21:62.39:1023,62,0	1/1:2,17:19:11.07:171,11,0	1/1:2,24:27:6.02:115,6,0	0/0:18,0:18:4.52:0,5,269	0/0:21,0:21:27.64:0,28,453	0/0:33,0:33:49.73:0,50,701	0/0:30,0:30:38.19:0,38,586	0/0:26,0:26:75.19:0,75,1092	1/1:0,16:16:15.05:256,15,0	0/0:10,0:10:27.09:0,27,413
chr10	102911481	.	T	TGTGCGACAA	39316.48	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-4.862;DP=521;FS=0.391;HRun=0;HaplotypeScore=142.2735;InbreedingCoeff=0.9825;MQ=91.05;MQ0=0;MQRankSum=-16.019;QD=105.41;ReadPosRankSum=-1.038;VQSLOD=4.8990;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,18:34:78.11:3241,78,0	1/1:2,7:10:27.09:1217,27,0	0/0:35,0:35:96.09:0,96,2480	0/0:21,0:21:60.20:0,60,1631	0/0:14,0:14:33.10:0,33,930	1/1:3,13:18:48.11:2162,48,0	1/1:10,11:21:63.18:2638,63,0	1/1:18,12:32:87.30:3791,87,0	1/1:7,16:24:66.23:2972,66,0	0/0:15,0:15:39.10:0,39,1183	0/0:15,0:15:42.14:0,42,1316	0/0:18,0:18:51.18:0,51,1599	1/1:9,11:20:57.10:2358,57,0	1/1:5,14:21:57.11:2414,57,0	1/1:5,13:21:57.15:2656,57,0	0/0:12,0:11:36.12:0,36,1137	1/1:11,9:24:48.16:2076,48,0	1/1:9,12:25:66.18:2923,66,0	1/1:9,1:16:45.07:1394,45,0	1/1:2,0:2:6.01:174,6,0	1/1:22,8:36:59.74:1973,60,0	1/1:7,9:17:48.03:1670,48,0	1/1:3,7:10:27.05:1203,27,0	1/1:6,7:15:36.12:1588,36,0	1/1:4,7:12:32.98:1060,33,0	0/0:7,0:7:21.07:0,21,605	1/1:7,8:15:38.92:1809,39,0	0/0:11,0:11:33.11:0,33,1043
chr10	102913837	.	GGC	G	30.84	PASS	AB=0.896;AC=8;AF=0.148;AN=54;BaseQRankSum=1.889;DP=238;FS=26.928;HRun=0;HaplotypeScore=46.7462;InbreedingCoeff=-0.0683;MQ=82.11;MQ0=0;MQRankSum=-3.000;QD=0.62;ReadPosRankSum=0.521;VQSLOD=0.2755;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:3.76:0,4,191	0/1:1,2:3:5.97:38,0,6	0/0:18,0:18:18.77:0,19,220	0/1:6,0:5:3.56:4,0,49	./.	0/0:6,0:6:2.98:0,3,24	0/0:11,0:11:23.76:0,24,184	0/0:8,0:8:8.96:0,9,73	0/1:8,0:8:14.12:14,0,36	0/0:9,0:9:11.96:0,12,96	1/1:5,0:5:0.47:1,0,0	0/0:7,0:7:11.94:0,12,92	0/0:5,0:5:5.20:0,5,43	0/0:7,0:7:11.34:0,11,117	0/0:5,0:5:2.95:0,3,20	0/0:11,0:11:12.83:0,13,111	0/1:12,0:12:29.50:29,0,64	0/1:6,1:7:24.16:24,0,49	0/0:9,0:9:11.10:0,11,74	0/0:4,0:4:11.92:0,12,86	0/0:14,0:14:17.88:0,18,135	0/1:8,1:9:35.34:35,0,63	0/0:3,0:3:1.49:0,1,47	0/0:18,0:18:21.20:0,21,245	0/0:5,0:5:10.45:0,10,57	0/0:8,0:8:7.05:0,7,57	0/0:9,1:10:14.81:0,15,122	0/0:8,0:8:6.11:0,6,55
chr10	102914106	.	T	TG	2917.22	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-0.371;DP=601;FS=7.962;HRun=7;HaplotypeScore=114.7293;InbreedingCoeff=0.9341;MQ=80.41;MQ0=0;MQRankSum=-0.602;QD=26.05;ReadPosRankSum=-1.880;VQSLOD=2.1459;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:89.62:0,90,840	0/0:5,0:5:9.01:0,9,87	0/0:20,0:20:17.15:0,17,256	0/0:11,0:11:1.18:0,1,102	0/0:17,0:17:36.02:0,36,339	0/0:23,0:23:63.09:0,63,608	0/0:26,0:26:72.11:0,72,695	1/1:5,18:23:48.12:557,48,0	0/0:24,0:24:69.10:0,69,662	0/0:18,0:18:51.08:0,51,492	0/0:14,0:14:39.05:0,39,370	0/0:26,0:26:75.11:0,75,719	0/0:25,0:25:60.08:0,60,579	0/0:31,0:31:81.09:0,81,772	0/0:13,0:13:36.06:0,36,348	0/0:18,0:18:51.05:0,51,481	0/0:26,0:26:66.10:0,66,637	0/0:31,0:31:90.12:0,90,861	1/1:2,17:19:48.15:578,48,0	1/1:2,15:17:42.13:507,42,0	1/1:2,32:34:78.24:942,78,0	0/0:28,0:28:66.09:0,66,637	0/0:17,0:17:39.05:0,39,376	0/0:18,0:18:50.98:0,51,464	0/0:22,0:22:48.04:0,48,456	0/0:29,0:29:81.12:0,81,778	1/1:2,17:19:42.13:507,42,0	0/0:14,0:14:33:0,33,308
chr10	102915407	.	G	GGTGTGT	7135.46	PASS	AB=1.000;AC=37;AF=0.712;AN=52;BaseQRankSum=5.500;DP=715;FS=33.820;HRun=0;HaplotypeScore=225.8703;InbreedingCoeff=0.7547;MQ=58.87;MQ0=3;MQRankSum=-7.139;QD=13.67;ReadPosRankSum=-1.746;VQSLOD=2.7267;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:41,4:46:14.04:315,14,0	1/1:9,2:11:3.01:58,3,0	0/1:23,0:14:10.97:11,0,25	./.	0/0:16,0:18:2:0,2,284	1/1:24,1:26:14.66:216,15,0	1/1:24,5:31:26.10:515,26,0	1/1:21,0:18:8.94:89,9,0	1/1:22,5:26:33.01:776,33,0	0/0:35,0:38:32.76:0,33,570	0/0:8,0:9:12.03:0,12,193	0/0:28,0:30:48.16:0,48,921	1/1:18,4:23:17.88:381,18,0	1/1:26,2:28:30.46:659,30,0	1/1:26,0:24:14.44:232,14,0	0/0:22,0:26:54.18:0,54,1067	1/1:28,0:37:23.36:1031,23,0	1/1:26,6:32:49.52:959,50,0	1/1:22,0:22:20.01:325,20,0	./.	1/1:33,0:33:5.95:67,6,0	1/1:22,4:27:5.86:108,6,0	1/1:17,1:18:3.01:75,3,0	1/1:38,7:46:23.54:482,24,0	1/1:16,5:22:20.78:391,21,0	0/0:27,0:27:29.16:0,29,495	1/1:22,0:20:35.89:444,36,0	0/0:11,0:14:26.99:0,27,436
chr10	102915431	.	T	TGCGTGC	2959.47	PASS	AB=0.955;AC=28;AF=0.519;AN=54;BaseQRankSum=8.415;DP=592;FS=23.606;HRun=0;HaplotypeScore=171.7148;InbreedingCoeff=0.4762;MQ=51.11;MQ0=5;MQRankSum=-8.645;QD=7.49;ReadPosRankSum=-0.405;VQSLOD=1.1627;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:8.27:188,8,0	1/1:6,0:6:2.45:19,2,0	0/0:19,0:10:18.06:0,18,336	0/0:20,0:12:20.72:0,21,299	0/0:16,0:16:30.53:0,31,483	0/1:14,5:20:8.16:14,0,8	0/1:36,0:36:40.52:187,0,41	0/1:17,0:14:17.04:17,0,17	1/1:22,0:22:12.04:328,12,0	0/0:21,0:21:54.11:0,54,950	0/0:8,0:8:18.05:0,18,308	0/0:28,0:28:81.20:0,81,1418	1/1:20,0:20:11.51:217,12,0	1/1:23,0:23:13.06:416,13,0	1/1:28,0:26:8.38:49,8,0	0/0:25,0:25:69.22:0,69,1337	1/1:31,0:31:19.61:448,20,0	1/1:30,0:30:23.11:699,23,0	1/1:15,0:15:17.38:115,17,0	./.	0/0:29,0:29:0.58:0,1,3	0/1:24,0:24:8.37:68,0,8	1/1:12,0:12:3:25,3,0	1/1:37,0:37:14.83:227,15,0	0/1:17,0:17:5.93:72,0,6	0/0:15,0:15:36.03:0,36,615	0/1:23,0:22:47.75:62,0,48	0/0:13,0:13:30.08:0,30,539
chr10	102915433	.	CGT	C	315.18	PASS	AB=0.945;AC=6;AF=0.111;AN=54;BaseQRankSum=0.632;DP=604;FS=40.628;HRun=0;HaplotypeScore=143.5145;InbreedingCoeff=-0.1161;MQ=53.20;MQ0=5;MQRankSum=0.404;QD=2.10;ReadPosRankSum=-1.724;VQSLOD=1.1385;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:25.82:0,26,153	0/0:7,0:7:6.17:0,6,32	0/0:22,0:14:35.86:0,36,488	0/0:19,1:13:26.35:0,26,328	0/0:15,0:15:35.88:0,36,511	0/0:18,0:18:16.46:0,16,103	0/0:36,0:36:11.25:0,11,107	0/1:18,0:15:33.92:227,0,34	0/0:25,0:24:40.07:0,40,241	0/0:21,0:21:56.38:0,56,908	0/0:8,0:8:20.73:0,21,301	0/0:29,0:29:86.33:0,86,1270	0/0:22,0:22:21.64:0,22,174	0/0:25,0:25:35.46:0,35,215	0/1:26,2:26:19.11:19,0,35	0/0:25,0:25:71.07:0,71,1150	0/1:20,11:31:52.41:52,0,160	0/0:29,0:29:38.66:0,39,388	0/1:16,0:16:78.01:78,0,97	./.	0/1:33,0:33:16.57:53,0,17	0/0:24,0:24:24.13:0,24,130	0/0:11,0:11:11.23:0,11,61	0/0:38,0:38:29.10:0,29,183	0/0:17,0:17:14.69:0,15,121	0/0:13,0:13:36.11:0,36,602	0/1:23,0:22:1.04:1,0,177	0/0:13,0:13:35.10:0,35,452
chr10	102915435	.	T	TGCGCGC	3442.84	PASS	AB=0.626;AC=29;AF=0.537;AN=54;BaseQRankSum=7.459;DP=634;FS=25.896;HRun=0;HaplotypeScore=171.7847;InbreedingCoeff=0.5177;MQ=54.15;MQ0=5;MQRankSum=-6.522;QD=7.52;ReadPosRankSum=-0.006;VQSLOD=0.8066;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,20:38:5.28:197,5,0	0/0:2,4:7:0.47:0,0,1	0/0:20,0:12:33.08:0,33,566	0/0:20,0:12:20.22:0,20,406	0/0:13,0:13:30.57:0,31,622	1/1:14,2:16:2.80:13,3,0	0/1:12,23:42:42.35:218,0,42	0/1:5,0:17:11.66:112,0,12	1/1:9,15:24:12.04:391,12,0	0/0:20,0:20:45.15:0,45,983	0/0:8,0:8:21.06:0,21,407	0/0:30,0:30:81.25:0,81,1621	1/1:13,9:24:11.45:180,11,0	1/1:13,14:30:17.42:437,17,0	1/1:15,0:25:5.68:34,6,0	0/0:26,0:26:69.21:0,69,1448	1/1:19,0:29:38.58:564,39,0	1/1:12,14:28:33.11:781,33,0	0/1:9,0:18:22.47:96,0,22	./.	1/1:12,0:35:6.59:25,7,0	1/1:6,18:26:2.96:88,3,0	0/1:7,7:16:0:0,0,0	1/1:21,18:42:8.85:216,9,0	1/1:12,5:20:3.01:55,3,0	0/0:13,0:13:30.09:0,30,627	0/1:11,0:20:36.88:37,0,131	0/0:11,0:11:27.09:0,27,597
chr10	102916056	.	CCT	C	7308.92	PASS	AB=0.983;AC=47;AF=0.839;AN=56;BaseQRankSum=9.492;DP=482;FS=14.407;HRun=0;HaplotypeScore=216.8310;InbreedingCoeff=-0.1924;MQ=71.27;MQ0=4;MQRankSum=-6.633;QD=15.16;ReadPosRankSum=10.472;VQSLOD=2.8000;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:26.62:284,27,0	1/1:5,0:5:14.93:114,15,0	0/1:19,2:21:99:106,0,156	0/1:16,0:16:51.60:155,0,52	1/1:22,1:23:48.35:394,48,0	1/1:20,1:21:56.16:449,56,0	0/1:20,0:20:55.05:210,0,55	0/1:24,0:24:28.88:319,0,29	1/1:13,0:13:10.68:213,11,0	1/1:20,0:19:56.69:427,57,0	0/1:14,1:15:1.14:226,0,1	1/1:17,0:17:11.64:268,12,0	1/1:19,0:19:29.47:289,29,0	1/1:24,0:24:44.58:424,45,0	0/1:16,0:14:3.63:210,0,4	1/1:11,0:11:3.27:173,3,0	1/1:12,0:12:25.93:189,26,0	0/1:21,0:20:40.25:221,0,40	0/1:16,0:16:24.23:234,0,24	1/1:17,0:17:44.69:329,45,0	0/1:15,0:14:18.23:104,0,18	1/1:18,0:18:5.60:259,6,0	1/1:21,0:21:34.12:364,34,0	1/1:9,0:9:11.91:85,12,0	1/1:19,0:19:30.64:344,31,0	1/1:23,0:23:48.29:445,48,0	1/1:18,0:18:45.87:338,46,0	1/1:7,0:7:17.90:134,18,0
chr10	102916062	.	CT	C	10298.82	PASS	AB=0.927;AC=53;AF=0.946;AN=56;BaseQRankSum=2.627;DP=452;FS=3.259;HRun=1;HaplotypeScore=206.5174;InbreedingCoeff=-0.0644;MQ=74.04;MQ0=4;MQRankSum=-4.445;QD=22.79;ReadPosRankSum=7.873;VQSLOD=4.4957;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:40.90:408,41,0	1/1:6,0:6:4.13:136,4,0	0/1:19,3:22:76.29:119,0,76	0/1:16,2:18:34.90:122,0,35	1/1:22,0:22:48.60:572,49,0	1/1:19,0:19:48.85:511,49,0	1/1:17,0:17:21.70:331,22,0	1/1:20,0:21:34.76:470,35,0	1/1:11,0:11:33.08:348,33,0	1/1:21,0:20:47.58:523,48,0	1/1:15,0:15:36.09:385,36,0	1/1:14,0:14:41.81:396,42,0	1/1:17,0:17:47.62:465,48,0	1/1:22,0:22:52.07:575,52,0	1/1:14,0:12:35.67:353,36,0	1/1:9,0:9:26.89:257,27,0	1/1:15,0:15:27.53:281,28,0	0/1:19,0:18:8.91:240,0,9	1/1:15,0:15:24.21:331,24,0	1/1:17,0:17:38.72:466,39,0	1/1:9,0:8:18.03:182,18,0	1/1:15,0:15:35.12:434,35,0	1/1:20,0:20:57.15:617,57,0	1/1:9,0:9:6.53:123,7,0	1/1:19,0:20:37.20:459,37,0	1/1:21,0:21:61.34:541,61,0	1/1:17,0:18:34.76:474,35,0	1/1:7,0:7:20.39:180,20,0
chr10	102916121	.	A	AC	504.71	PASS	AB=0.823;AC=10;AF=0.179;AN=56;BaseQRankSum=-0.562;DP=440;FS=0.000;HRun=10;HaplotypeScore=113.0691;InbreedingCoeff=0.2595;MQ=67.85;MQ0=0;MQRankSum=0.473;QD=3.88;ReadPosRankSum=-3.839;VQSLOD=0.0744;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:22:38.98:0,39,279	0/0:6,0:6:14.98:0,15,123	0/1:27,0:24:24.49:24,0,107	0/1:11,0:10:3.17:3,0,88	0/0:10,0:11:25.99:0,26,183	0/0:13,0:13:29.95:0,30,246	0/0:21,0:22:17.68:0,18,274	0/1:17,3:20:12.66:67,0,13	0/0:15,0:17:34.01:0,34,256	0/0:17,0:17:32.90:0,33,265	0/0:11,0:12:19.84:0,20,138	0/0:18,0:19:38.85:0,39,310	0/0:13,0:13:22.77:0,23,174	0/0:16,0:17:13.77:0,14,232	0/1:3,6:10:9.82:80,0,10	0/0:13,0:15:33.95:0,34,258	0/0:24,0:25:52.93:0,53,421	0/0:16,0:17:43.97:0,44,350	1/1:11,0:11:14.94:131,15,0	0/1:11,6:17:9.50:81,0,9	1/1:11,6:17:3.08:210,3,0	0/0:15,0:17:34:0,34,253	0/0:11,0:12:19.99:0,20,153	0/0:8,0:9:17.01:0,17,128	0/0:20,0:20:42.95:0,43,322	0/0:14,0:15:20:0,20,153	0/1:11,6:17:37.40:52,0,37	0/0:11,0:11:17.95:0,18,144
chr10	102918550	.	CT	C	1073.02	PASS	AB=0.678;AC=19;AF=0.339;AN=56;BaseQRankSum=4.422;DP=535;FS=16.908;HRun=16;HaplotypeScore=98.2573;InbreedingCoeff=0.2192;MQ=70.45;MQ0=0;MQRankSum=-1.090;QD=4.16;ReadPosRankSum=6.182;VQSLOD=-0.1423;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,12:30:8.99:103,0,9	1/1:4,8:13:11.53:71,12,0	0/0:28,0:23:28.19:0,28,168	0/0:22,0:12:9.41:0,9,65	0/0:27,1:28:32.87:0,33,371	0/1:9,13:23:18.73:116,0,19	0/1:9,13:22:16.53:129,0,17	0/0:19,0:31:47.53:0,48,283	1/1:7,11:18:4.12:91,4,0	0/0:16,4:20:5.32:0,5,231	0/1:8,1:9:3.04:3,0,84	0/0:18,0:18:24.77:0,25,191	0/1:5,10:15:1.72:101,0,2	0/1:7,6:14:14.31:31,0,14	0/0:4,0:16:11.45:0,11,59	0/0:11,0:14:9.46:0,9,157	1/1:6,0:20:22.31:65,22,0	1/1:6,15:21:6.95:154,7,0	0/0:10,0:15:5.57:0,6,118	0/0:10,0:20:31.90:0,32,193	0/0:10,0:16:8.65:0,9,46	0/1:7,13:21:38.45:125,0,38	1/1:4,11:16:14.89:93,15,0	0/1:11,4:16:12.54:31,0,13	0/1:8,11:20:21.87:133,0,22	0/0:14,1:15:2.76:0,3,112	0/0:15,0:17:16.89:0,17,167	0/0:12,1:16:3.23:0,3,220
chr10	102919615	.	A	ACAT	6849.73	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-8.828;DP=641;FS=2.298;HRun=0;HaplotypeScore=96.3129;InbreedingCoeff=0.9962;MQ=86.60;MQ0=0;MQRankSum=-7.392;QD=58.54;ReadPosRankSum=-2.262;VQSLOD=6.2324;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,2563	0/0:15,0:15:42.13:0,42,705	0/0:19,0:19:51.17:0,51,870	0/0:28,0:28:64.47:0,64,1148	0/0:12,0:12:36.12:0,36,628	0/0:19,0:19:57.19:0,57,993	0/0:35,0:35:99:0,105,1707	1/1:6,21:31:90.25:1948,90,0	0/0:11,0:11:33.11:0,33,582	0/0:25,0:25:75.26:0,75,1319	0/0:17,0:17:51.17:0,51,899	0/0:26,0:26:78.25:0,78,1348	0/0:21,0:21:57.17:0,57,965	0/0:23,0:23:69.22:0,69,1185	0/0:28,0:28:81.28:0,81,1428	0/0:16,0:16:48.15:0,48,818	0/0:31,0:31:93.30:0,93,1592	0/0:30,0:30:87.30:0,87,1533	1/1:5,10:16:48.16:1125,48,0	1/1:1,14:15:42.14:975,42,0	1/1:1,30:31:66.22:1560,66,0	0/0:20,0:20:60.19:0,60,1031	0/0:21,0:21:60.16:0,60,1015	0/0:18,0:18:54.18:0,54,942	0/0:26,0:26:75.24:0,75,1263	0/0:28,0:28:78.27:0,78,1376	1/1:5,15:24:53.75:1242,54,0	0/0:5,0:5:15.05:0,15,265
chr10	102920452	.	CCCTT	C	221.23	PASS	AB=0.903;AC=9;AF=0.173;AN=52;BaseQRankSum=1.785;DP=308;FS=2.319;HRun=0;HaplotypeScore=54.7312;InbreedingCoeff=0.3683;MQ=55.28;MQ0=10;MQRankSum=1.197;QD=4.25;ReadPosRankSum=-0.294;VQSLOD=1.3077;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:33.45:0,33,324	0/0:6,0:6:8.97:0,9,70	./.	./.	0/0:12,0:11:27:0,27,341	0/0:13,0:13:24.05:0,24,362	0/0:18,0:17:30.87:0,31,399	0/0:6,0:4:2.98:0,3,21	0/0:20,0:20:0.07:0,0,269	0/1:10,7:15:24.27:169,0,24	1/1:4,3:7:3.01:47,3,0	0/0:11,0:11:15:0,15,157	0/0:19,0:19:30.05:0,30,393	1/1:14,0:12:11.97:99,12,0	1/1:2,0:2:2.94:18,3,0	0/0:14,0:14:21.03:0,21,316	0/1:11,0:11:12.44:12,0,69	0/0:9,0:8:17.37:0,17,145	0/0:5,0:3:3:0,3,28	0/1:1,0:1:0:0,0,0	0/0:9,0:8:15.01:0,15,135	0/0:18,0:18:24.06:0,24,434	0/0:13,0:12:24.04:0,24,357	0/0:14,0:14:0.05:0,0,244	0/0:15,0:14:17.96:0,18,215	0/0:15,0:15:33.04:0,33,535	0/0:2,0:2:6:0,6,53	0/0:5,0:3:5.95:0,6,58
chr10	102920936	.	CTGTG	C	3011.85	PASS	AB=0.874;AC=15;AF=0.268;AN=56;BaseQRankSum=7.285;DP=836;FS=5.795;HRun=0;HaplotypeScore=134.7236;InbreedingCoeff=0.6560;MQ=57.10;MQ0=22;MQRankSum=-1.601;QD=10.35;ReadPosRankSum=0.379;VQSLOD=2.6098;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,1:40:29.40:0,29,1415	0/0:9,0:9:15.03:0,15,307	0/0:47,0:15:6.02:0,6,114	0/0:59,0:16:6.02:0,6,127	0/0:22,0:22:39.13:0,39,892	0/0:13,0:14:35.80:0,36,619	0/1:38,1:44:30.56:31,0,1249	1/1:26,3:28:15.03:212,15,0	0/0:27,0:30:59.67:0,60,1255	0/0:22,0:22:24.55:0,25,433	0/0:10,0:10:21.06:0,21,432	0/0:33,0:38:31.56:0,32,1500	0/0:25,0:27:47.90:0,48,1017	0/0:34,1:37:17.84:0,18,1252	1/1:18,19:39:54.17:845,54,0	0/0:33,0:34:77.74:0,78,1617	0/0:25,0:29:50.58:0,51,969	0/0:19,1:24:13.96:0,14,948	1/1:14,6:20:15.16:300,15,0	1/1:11,10:22:24.08:381,24,0	1/1:48,31:79:21.75:888,22,0	0/0:21,0:21:36.11:0,36,759	0/1:11,1:14:27.25:27,0,301	0/0:35,0:38:81.01:0,81,1818	0/1:13,1:17:9.89:10,0,611	0/0:20,1:23:1.41:0,1,819	1/1:12,13:26:33.11:508,33,0	0/0:18,0:21:33.25:0,33,675
chr10	102921651	.	C	CGACCT	2265.07	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.291;DP=753;FS=0.000;HRun=0;HaplotypeScore=135.9780;InbreedingCoeff=0.9838;MQ=79.61;MQ0=0;MQRankSum=-0.897;QD=73.07;ReadPosRankSum=1.023;VQSLOD=5.1975;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,154,3355	0/0:5,0:5:15.05:0,15,314	0/0:22,0:22:57.20:0,57,1208	0/0:20,0:20:42.14:0,42,924	0/0:20,0:20:57.15:0,57,1202	0/0:26,0:26:78.27:0,78,1702	0/0:34,0:34:99:0,99,2207	0/0:29,0:29:87.27:0,87,1794	0/0:34,0:34:96.33:0,96,2120	0/0:16,0:16:36.12:0,36,802	0/0:12,0:12:33.11:0,33,729	0/0:36,0:36:99:0,99,2180	0/0:40,0:40:99:0,114,2474	0/0:22,0:22:66.23:0,66,1449	1/1:3,25:31:75.26:2360,75,0	0/0:27,0:27:78.27:0,78,1725	0/0:36,0:36:99:0,105,2297	0/0:28,0:28:81.28:0,81,1804	0/0:27,0:27:72.24:0,72,1547	0/0:17,0:17:48.16:0,48,1050	0/0:52,0:52:99:0,147,3037	0/0:18,0:18:51.13:0,51,1041	0/0:14,0:14:33.11:0,33,717	0/0:39,0:39:99:0,117,2536	0/0:20,0:19:54.19:0,54,1204	0/0:38,0:38:99:0,111,2414	0/0:21,0:21:60.21:0,60,1305	0/0:17,0:17:39.13:0,39,851
chr10	102922021	.	GACAA	G	1888.81	PASS	AB=0.986;AC=17;AF=0.304;AN=56;BaseQRankSum=8.272;DP=486;FS=31.327;HRun=0;HaplotypeScore=93.4980;InbreedingCoeff=-0.0546;MQ=56.32;MQ0=19;MQRankSum=2.960;QD=6.67;ReadPosRankSum=6.323;VQSLOD=0.1494;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:22.57:243,0,23	0/1:9,0:9:11.15:86,0,11	0/0:26,0:6:2.70:0,3,80	0/1:21,0:7:20.02:20,0,21	0/0:10,0:10:22.98:0,23,380	0/1:22,2:23:12.77:189,0,13	1/1:19,0:19:21.80:150,22,0	0/0:29,0:29:58.67:0,59,1024	0/1:10,0:10:38.16:119,0,38	0/0:10,0:10:29.96:0,30,495	0/0:11,0:11:26.87:0,27,418	0/0:11,0:11:20.49:0,20,394	0/1:5,0:5:4.97:86,0,5	0/1:11,0:10:32.93:112,0,33	0/0:13,0:13:27.26:0,27,449	0/0:13,0:13:30:0,30,503	0/1:34,0:28:35.76:180,0,36	0/1:29,2:28:54.21:268,0,54	0/0:21,0:19:57:0,57,827	0/0:14,0:15:34.30:0,34,630	0/1:9,0:7:2.53:3,0,38	0/1:12,0:12:25.25:57,0,25	0/1:16,0:16:31.79:152,0,32	1/1:19,0:18:24.58:184,25,0	0/1:30,0:28:31.37:209,0,31	0/0:16,0:16:30.58:0,31,699	0/0:17,0:17:44.54:0,45,699	0/0:11,0:9:18.06:0,18,327
chr10	102922023	.	CAAAA	C	4216.71	PASS	AB=0.867;AC=26;AF=0.464;AN=56;BaseQRankSum=2.806;DP=498;FS=9.382;HRun=17;HaplotypeScore=89.4760;InbreedingCoeff=0.8347;MQ=56.26;MQ0=19;MQRankSum=2.943;QD=15.73;ReadPosRankSum=7.488;VQSLOD=1.2644;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,23:32:52.06:634,52,0	1/1:3,6:9:8.95:216,9,0	0/0:27,0:6:6.49:0,6,79	0/1:20,0:7:32.64:37,0,33	0/0:13,0:13:30.09:0,30,494	1/1:12,10:23:37.08:444,37,0	1/1:4,15:19:20.72:266,21,0	0/0:26,0:31:72.44:0,72,1207	0/1:7,2:9:3.57:122,0,4	0/0:11,0:13:33.06:0,33,557	0/0:9,0:12:27.56:0,28,496	0/0:11,0:11:26.53:0,27,432	1/1:3,2:5:8.94:96,9,0	1/1:9,2:10:14.64:142,15,0	0/0:13,0:14:30.07:0,30,518	0/0:13,0:14:30.10:0,30,564	1/1:15,16:26:29.55:338,30,0	1/1:17,11:27:45.97:540,46,0	0/0:18,0:20:51.13:0,51,859	0/0:15,0:15:45.06:0,45,738	0/0:9,0:7:9.24:0,9,123	1/1:4,6:12:16.16:178,16,0	1/1:10,5:16:26.38:310,26,0	1/1:6,13:18:24.96:306,25,0	1/1:9,20:28:31.64:589,32,0	0/0:16,0:18:44.86:0,45,684	0/0:18,0:19:51.10:0,51,854	0/0:8,0:9:18.03:0,18,312
chr10	102922909	.	A	ATGTG	474.76	PASS	AB=0.990;AC=20;AF=0.417;AN=48;BaseQRankSum=4.784;DP=541;FS=0.000;HRun=0;HaplotypeScore=116.2532;InbreedingCoeff=0.6016;MQ=64.49;MQ0=11;MQRankSum=-1.270;QD=2.12;ReadPosRankSum=-0.518;VQSLOD=1.8321;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:18:9.03:143,9,0	1/1:7,0:7:3:25,3,0	0/0:29,0:22:3.01:0,3,33	0/0:22,0:15:3.01:0,3,35	0/0:15,0:17:25.44:0,25,446	1/1:24,0:20:3.01:54,3,0	0/1:24,0:23:0:0,0,0	0/0:31,0:31:15.05:0,15,178	1/1:18,0:16:9.03:152,9,0	0/1:24,0:23:2.45:2,0,545	0/0:16,0:16:21.07:0,21,301	0/0:25,0:23:36.11:0,36,516	1/1:23,0:20:9.49:102,9,0	./.	./.	0/0:19,0:19:33.08:0,33,464	1/1:19,0:16:6.02:70,6,0	./.	0/0:14,0:14:9.03:0,9,107	0/0:21,0:21:21.84:0,22,261	0/0:17,0:15:6.48:0,6,62	0/1:13,0:12:0:0,0,0	1/1:12,0:8:3:25,3,0	0/1:20,0:17:0:0,0,0	1/1:19,0:17:3.01:51,3,0	0/0:17,0:17:14.60:0,15,269	./.	0/0:17,0:17:27.08:0,27,380
chr10	102922940	.	TGTGAGA	T	581.68	PASS	AB=0.918;AC=11;AF=0.212;AN=52;BaseQRankSum=0.629;DP=529;FS=6.024;HRun=0;HaplotypeScore=97.3445;InbreedingCoeff=0.2312;MQ=37.64;MQ0=41;MQRankSum=1.973;QD=4.47;ReadPosRankSum=-1.432;VQSLOD=1.3912;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:18:8.98:0,9,72	0/0:2,0:2:3:0,3,25	1/1:3,0:1:2.04:6,2,0	0/0:7,0:2:2.99:0,3,23	0/0:21,0:19:39.02:0,39,665	0/0:21,0:17:9.02:0,9,101	0/0:22,0:17:0.28:0,0,1	1/1:18,0:16:26.97:282,27,0	0/0:25,0:19:8.96:0,9,70	0/0:34,0:30:60.71:0,61,1241	0/1:16,0:16:25.82:26,0,173	0/0:32,0:29:50.37:0,50,920	0/0:23,0:19:17.47:0,17,152	./.	0/0:27,0:26:0:0,0,0	0/0:26,0:26:59.18:0,59,930	0/1:19,0:14:20.89:21,0,137	./.	0/1:17,0:10:26.79:134,0,27	0/1:19,2:19:59.97:153,0,60	1/1:15,0:9:8.98:73,9,0	0/0:15,0:14:0:0,0,0	0/0:13,0:9:5.99:0,6,50	0/0:22,0:16:6.02:0,6,73	0/0:18,0:16:3:0,3,25	0/0:30,0:25:44.79:0,45,1267	0/1:11,10:19:24.60:25,0,48	0/0:11,0:11:29.96:0,30,451
chr10	102922981	.	GAC	G	262.48	PASS	AB=0.841;AC=16;AF=0.320;AN=50;BaseQRankSum=6.371;DP=509;FS=4.603;HRun=0;HaplotypeScore=108.1446;InbreedingCoeff=-0.0283;MQ=36.55;MQ0=40;MQRankSum=-2.600;QD=1.05;ReadPosRankSum=-1.920;VQSLOD=1.5769;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,5:13:2.94:18,3,0	0/0:4,0:4:3.01:0,3,31	./.	./.	0/0:26,0:22:51.03:0,51,857	0/1:18,5:20:9.82:10,0,72	0/1:15,5:15:0.40:0,0,1	0/0:40,0:35:84.07:0,84,688	0/1:17,3:16:5.78:6,0,21	0/0:27,0:22:61:0,61,998	0/0:20,0:20:30.05:0,30,465	0/0:23,0:21:27.14:0,27,755	0/1:9,6:12:36.22:210,0,36	0/1:6,2:5:0:0,0,0	1/1:17,4:20:0.67:2,1,0	0/0:23,0:23:54.61:0,55,932	0/1:13,0:8:31.61:32,0,45	0/1:6,5:8:26.59:42,0,27	0/1:13,0:9:37.16:37,0,135	0/1:18,4:19:11.35:11,0,124	./.	0/0:11,8:19:3.01:0,3,51	0/0:5,4:8:0:0,0,0	0/1:24,1:20:12.97:13,0,90	0/1:10,6:15:0:0,0,0	0/0:34,0:29:37.60:0,38,1310	0/1:17,3:18:7.42:7,0,63	0/0:9,0:9:24.08:0,24,435
chr10	102922983	.	C	CAG	321.23	PASS	AB=0.945;AC=18;AF=0.346;AN=52;BaseQRankSum=6.447;DP=523;FS=6.518;HRun=0;HaplotypeScore=111.4411;InbreedingCoeff=0.2537;MQ=38.41;MQ0=38;MQRankSum=-2.442;QD=1.54;ReadPosRankSum=-2.885;VQSLOD=0.8104;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:13:3.01:37,3,0	./.	0/1:5,0:2:0:0,0,0	0/1:7,0:1:0:0,0,0	0/0:25,0:22:54.09:0,54,675	0/0:24,0:21:2.88:0,3,40	1/1:22,0:17:2.84:37,3,0	0/0:40,0:35:39.37:0,39,276	1/1:17,3:16:2.90:16,3,0	0/0:26,0:22:60.15:0,60,766	0/0:20,0:20:30.10:0,30,392	0/0:24,0:22:45.09:0,45,572	0/1:12,3:12:18.98:182,0,19	0/0:8,0:5:0:0,0,0	1/1:21,0:20:2.84:29,3,0	0/0:25,0:25:51.17:0,51,678	0/1:12,1:8:28.59:29,0,34	1/1:11,0:8:5.75:42,6,0	0/1:13,0:9:22.08:22,0,41	0/1:24,0:20:30.49:30,0,55	0/0:21,0:14:0:0,0,0	0/0:19,1:20:2.95:0,3,40	0/1:9,1:9:0:0,0,0	0/1:22,3:20:36.01:36,0,62	./.	0/0:33,0:28:68.93:0,69,890	0/0:19,0:18:8.30:0,8,67	0/0:10,0:10:21.07:0,21,279
chr10	102922991	.	C	CAG	455.62	PASS	AB=0.873;AC=12;AF=0.214;AN=56;BaseQRankSum=5.317;DP=524;FS=4.411;HRun=0;HaplotypeScore=111.8010;InbreedingCoeff=0.0126;MQ=39.78;MQ0=32;MQRankSum=-6.176;QD=2.39;ReadPosRankSum=1.771;VQSLOD=1.7858;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,4:13:0:0,0,0	0/1:1,2:5:14.82:31,0,15	0/0:7,0:2:2.96:0,3,34	0/1:12,0:1:0:0,0,0	0/0:25,0:22:51.17:0,51,678	0/0:20,4:22:5.85:0,6,67	0/1:15,5:15:0.17:0,0,0	0/1:41,0:36:99:321,0,198	0/1:13,5:15:13.64:46,0,14	0/0:27,0:24:57.16:0,57,722	0/0:18,0:18:27.09:0,27,358	0/0:23,0:21:51.17:0,51,672	0/1:13,2:13:9.01:9,0,40	0/0:13,0:10:2.93:0,3,20	0/1:14,2:15:0:0,0,0	0/0:24,0:24:60.19:0,60,789	0/1:12,1:10:47.77:48,0,63	0/1:11,1:9:37.11:37,0,64	0/1:10,1:11:17.69:81,0,18	0/0:18,0:19:23.16:0,23,186	0/0:19,0:15:2.99:0,3,24	0/0:16,2:18:5.92:0,6,56	0/1:10,0:9:0:0,0,0	0/0:24,2:21:7.68:0,8,63	0/1:11,4:14:0:0,0,0	0/0:36,0:31:72.20:0,72,932	0/0:11,0:14:0.69:0,1,37	0/0:15,0:15:33.04:0,33,386
chr10	102922995	.	GAGAC	G	733.01	PASS	AB=0.867;AC=8;AF=0.143;AN=56;BaseQRankSum=3.487;DP=533;FS=9.789;HRun=0;HaplotypeScore=125.9996;InbreedingCoeff=0.0945;MQ=40.74;MQ0=30;MQRankSum=-4.318;QD=5.73;ReadPosRankSum=-0.886;VQSLOD=1.4297;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:12:2.97:0,3,20	0/0:6,0:6:4.36:0,4,33	0/0:8,0:2:4.72:0,5,20	0/0:15,0:2:2.22:0,2,8	0/0:23,0:21:54.17:0,54,1346	0/0:23,0:22:5.92:0,6,73	1/1:23,0:18:0.25:1,0,0	0/1:33,13:41:99:632,0,660	0/0:18,0:15:6:0,6,66	0/0:29,0:26:69.06:0,69,1347	0/0:17,0:17:30.10:0,30,775	0/0:24,0:22:53.89:0,54,1087	0/0:16,0:14:20.76:0,21,214	0/0:11,0:9:2.62:0,3,24	0/0:17,0:15:2.60:0,3,7	0/0:25,0:25:69.69:0,70,1587	0/1:16,0:13:11.32:11,0,66	0/0:12,0:9:14.94:0,15,132	0/1:11,2:11:99:144,0,217	0/0:19,3:19:26.86:0,27,406	0/0:18,2:16:5.76:0,6,78	0/0:18,0:18:5.96:0,6,49	0/0:10,0:9:0:0,0,0	0/0:24,0:20:1.91:0,2,64	1/1:16,0:15:2.50:10,2,0	0/0:33,0:29:77.59:0,78,1705	0/1:11,3:14:45.90:46,0,91	0/0:15,0:15:42.13:0,42,882
chr10	102923111	.	ATTC	A	604.02	PASS	AB=0.990;AC=18;AF=0.321;AN=56;BaseQRankSum=9.657;DP=632;FS=5.677;HRun=0;HaplotypeScore=138.6657;InbreedingCoeff=0.0048;MQ=69.28;MQ0=3;MQRankSum=-4.466;QD=2.03;ReadPosRankSum=1.875;VQSLOD=1.7909;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:8.45:0,8,78	0/1:7,0:7:12.63:13,0,16	0/0:26,0:19:6.01:0,6,86	0/0:29,0:25:38.99:0,39,476	0/0:31,0:31:57.17:0,57,1016	0/1:18,0:18:26.50:74,0,27	0/1:22,0:20:16.45:21,0,16	0/0:35,0:35:13.49:0,13,161	0/1:16,0:14:9.58:80,0,10	0/1:38,2:40:31.06:31,0,1534	0/1:22,2:24:28.80:29,0,862	0/0:27,0:26:63.20:0,63,1188	1/1:10,0:10:4.86:52,5,0	1/1:12,0:12:6.18:47,6,0	0/0:21,0:21:18.27:0,18,142	0/0:22,0:22:45.14:0,45,828	0/0:24,0:23:34.75:0,35,411	0/0:11,0:11:0.91:0,1,19	1/1:22,0:22:4.60:43,5,0	0/0:29,0:29:12.91:0,13,138	0/1:18,0:18:0.09:0,0,0	0/1:31,0:31:18.32:146,0,18	0/1:19,0:19:16.18:16,0,61	0/1:16,0:15:12.82:13,0,30	0/1:19,0:18:3.91:131,0,4	0/0:30,0:29:66.22:0,66,1250	0/1:23,0:22:22.97:66,0,23	0/0:26,0:25:63.17:0,63,1091
chr10	102923139	.	TTCC	T	3547.78	PASS	AB=0.905;AC=31;AF=0.554;AN=56;BaseQRankSum=10.100;DP=501;FS=0.000;HRun=0;HaplotypeScore=110.2607;InbreedingCoeff=0.4811;MQ=47.18;MQ0=20;MQRankSum=-4.472;QD=12.85;ReadPosRankSum=-1.015;VQSLOD=2.6780;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:16:4.90:104,0,5	0/1:5,1:6:7.23:67,0,7	0/0:8,0:2:3.01:0,3,52	0/0:15,0:13:26.37:0,26,306	0/0:27,0:27:71.96:0,72,1117	1/1:11,3:14:32.79:330,33,0	1/1:6,6:9:2.23:61,2,0	0/1:33,0:25:30.95:93,0,31	1/1:9,2:10:20.63:233,21,0	0/0:40,0:40:81.17:0,81,1897	0/0:23,0:21:28.86:0,29,1020	0/0:25,0:24:72.08:0,72,1342	1/1:6,2:5:15.01:166,15,0	1/1:5,3:7:17.73:171,18,0	1/1:16,2:18:14.44:194,14,0	0/0:23,0:22:63.13:0,63,1021	0/1:18,0:17:16.03:16,0,167	1/1:2,1:3:6.45:52,6,0	0/1:15,3:18:29.54:191,0,30	1/1:19,2:21:17.30:232,17,0	0/1:6,2:8:1.20:89,0,1	1/1:16,5:19:53.88:585,54,0	1/1:11,3:14:19.67:174,20,0	0/1:11,3:11:24.79:48,0,25	1/1:9,4:11:30.07:382,30,0	0/0:35,0:32:93.15:0,93,1523	1/1:16,3:17:34.91:360,35,0	0/0:29,0:28:75.17:0,75,1408
chr10	102923154	.	T	TTCC	2190.72	PASS	AB=1.000;AC=28;AF=0.519;AN=54;BaseQRankSum=10.654;DP=389;FS=11.971;HRun=0;HaplotypeScore=97.1880;InbreedingCoeff=0.4746;MQ=45.51;MQ0=25;MQRankSum=-6.608;QD=11.53;ReadPosRankSum=-2.472;VQSLOD=2.0970;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:9:11.54:66,12,0	0/1:5,0:5:30.35:30,0,53	./.	0/0:3,0:2:3.01:0,3,33	0/0:24,0:22:60.19:0,60,992	1/1:8,1:9:23.04:182,23,0	0/1:11,0:5:10.05:36,0,10	1/1:10,15:17:24.02:396,24,0	1/1:8,1:8:17.79:183,18,0	0/0:34,0:34:99:0,99,1569	0/0:24,0:22:63.16:0,63,1003	0/0:22,0:21:63.22:0,63,1071	1/1:6,0:3:6:71,6,0	1/1:8,0:7:12:162,12,0	0/1:13,0:12:46.50:47,0,130	0/0:22,0:21:60.19:0,60,995	1/1:14,0:14:21.77:417,22,0	1/1:2,0:2:2.03:5,2,0	0/0:10,0:10:7.15:0,7,89	0/1:16,0:16:46.56:47,0,59	0/0:6,0:6:8.89:0,9,85	1/1:14,2:14:16.05:365,16,0	1/1:9,0:9:11:62,11,0	0/1:14,0:11:5.61:60,0,6	1/1:8,1:7:20.95:227,21,0	0/0:26,0:23:69.23:0,69,1152	0/1:12,0:10:30.39:30,0,80	0/0:25,0:24:72.23:0,72,1193
chr10	102923160	.	CTCT	C	593.70	PASS	AB=0.990;AC=22;AF=0.423;AN=52;BaseQRankSum=8.864;DP=362;FS=9.928;HRun=0;HaplotypeScore=101.4312;InbreedingCoeff=0.3437;MQ=45.30;MQ0=23;MQRankSum=-5.607;QD=4.18;ReadPosRankSum=-3.999;VQSLOD=-0.0574;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:9:10.84:31,0,11	0/1:3,0:4:10.03:10,0,31	./.	./.	0/0:24,0:22:54.17:0,54,1110	0/1:8,0:8:2.50:26,0,2	0/1:10,1:5:12.74:31,0,13	1/1:20,0:14:27.24:119,27,0	1/1:8,2:8:14.56:110,15,0	0/0:31,0:31:87.22:0,87,1672	0/0:23,0:21:45.11:0,45,852	0/0:23,0:22:63.22:0,63,1292	1/1:3,2:2:6.02:70,6,0	1/1:5,2:6:6.52:55,7,0	0/0:12,0:11:12.86:0,13,123	0/0:23,0:22:66.20:0,66,1353	0/0:14,0:14:0.70:0,1,74	0/1:2,0:2:0.02:0,0,0	0/1:9,0:9:31.97:32,0,87	0/1:14,0:14:1.76:2,0,14	0/0:6,0:6:3.97:0,4,19	1/1:12,2:12:3.55:128,4,0	1/1:5,2:7:5.54:27,6,0	0/0:13,2:12:0.12:0,0,39	1/1:8,0:6:8.48:54,8,0	0/0:25,0:22:57.20:0,57,1248	0/1:12,0:10:3.44:63,0,3	0/0:24,0:23:66.20:0,66,1391
chr10	102923163	.	T	TTCC	1552.34	PASS	AB=1.000;AC=28;AF=0.538;AN=52;BaseQRankSum=10.182;DP=341;FS=28.719;HRun=0;HaplotypeScore=92.8652;InbreedingCoeff=0.2815;MQ=44.74;MQ0=24;MQRankSum=-7.259;QD=9.03;ReadPosRankSum=-4.745;VQSLOD=-0.4891;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,9:9:12.04:195,12,0	0/1:4,0:4:23.54:24,0,46	./.	./.	0/0:24,0:22:54.17:0,54,885	1/1:6,1:7:14.98:157,15,0	0/1:9,0:3:12.73:31,0,13	1/1:16,0:10:26.59:164,27,0	1/1:7,2:7:15:185,15,0	0/0:31,0:31:90.23:0,90,1413	0/0:20,0:18:48.11:0,48,710	0/0:23,0:22:66.22:0,66,1087	1/1:5,0:2:6.02:71,6,0	1/1:5,1:5:8.65:105,9,0	0/1:10,0:9:52.99:53,0,94	0/0:25,0:24:72.19:0,72,1123	0/1:13,0:13:8.18:96,0,8	0/0:1,0:1:0:0,0,0	0/1:9,0:8:60.32:73,0,60	1/1:12,0:12:1.10:27,1,0	0/1:6,0:6:25.62:26,0,55	1/1:13,1:12:24.34:228,24,0	1/1:6,0:6:5.88:53,6,0	0/1:15,0:12:20.97:21,0,44	1/1:7,0:6:9.02:118,9,0	0/0:22,0:19:57.20:0,57,972	0/1:12,0:10:12.60:104,0,13	0/0:23,0:22:66.20:0,66,1091
chr10	102923169	.	CTCT	C	686.63	PASS	AB=0.955;AC=25;AF=0.521;AN=48;BaseQRankSum=8.993;DP=304;FS=36.912;HRun=0;HaplotypeScore=84.8289;InbreedingCoeff=0.4354;MQ=44.46;MQ0=24;MQRankSum=-8.702;QD=6.13;ReadPosRankSum=-3.223;VQSLOD=-0.0121;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:8:25.08:46,0,25	1/1:4,0:4:7.17:45,7,0	./.	./.	0/0:21,0:19:39.33:0,39,787	1/1:6,0:6:6.43:56,6,0	./.	1/1:9,0:5:11.39:68,11,0	1/1:8,0:6:11.96:101,12,0	0/0:31,0:31:79.37:0,79,1273	0/0:17,0:15:42.14:0,42,764	0/0:22,0:21:51.14:0,51,802	1/1:3,2:2:6.02:67,6,0	1/1:4,0:3:5.22:32,5,0	0/0:7,0:6:2.09:0,2,12	0/0:25,0:24:72.21:0,72,1345	0/0:13,0:13:16.15:0,16,158	./.	0/1:8,0:7:21.55:22,0,37	1/1:2,8:10:9.03:106,9,0	0/1:5,0:5:10.68:11,0,11	1/1:9,0:7:11.96:115,12,0	1/1:6,0:6:5.47:25,5,0	0/1:11,2:10:21.91:75,0,22	1/1:5,0:3:3.94:23,4,0	0/0:25,0:22:63.02:0,63,1058	0/1:9,1:8:13.45:68,0,13	0/0:23,0:22:63.14:0,63,1006
chr10	102923217	.	TTCC	T	797.95	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=2.910;DP=367;FS=11.289;HRun=0;HaplotypeScore=90.8353;InbreedingCoeff=0.5745;MQ=42.74;MQ0=24;MQRankSum=-6.729;QD=6.09;ReadPosRankSum=-2.094;VQSLOD=1.3257;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:12:10.53:11,0,109	1/1:2,0:2:0.47:1,0,0	0/0:4,0:1:3:0,3,26	0/0:4,0:2:5.99:0,6,51	0/0:21,0:19:49.29:0,49,666	0/0:12,0:11:20.84:0,21,173	0/0:13,0:7:14.82:0,15,112	1/1:31,0:23:36.25:279,36,0	0/0:12,0:10:20.82:0,21,159	0/0:31,0:29:71.60:0,72,1141	0/0:16,0:15:42.09:0,42,641	0/0:16,0:16:48.03:0,48,705	0/0:9,0:9:23.40:0,23,196	0/0:14,0:11:32.80:0,33,282	1/1:12,0:12:23.51:101,24,0	0/0:28,0:27:80.91:0,81,1218	0/1:13,0:10:3.64:4,0,146	0/0:4,0:4:1.06:0,1,67	1/1:10,1:9:17.95:166,18,0	1/1:9,1:9:14.94:97,15,0	1/1:4,0:4:5.91:38,6,0	0/0:7,0:6:11.85:0,12,82	0/1:9,0:8:2.25:2,0,79	0/1:13,0:12:14.97:15,0,93	0/0:4,0:3:5.96:0,6,53	0/0:26,0:26:54.62:0,55,949	1/1:7,5:11:26.73:263,27,0	0/0:15,0:13:32.98:0,33,339
chr10	102923238	.	TTCC	T	1955.59	PASS	AB=0.995;AC=26;AF=0.464;AN=56;BaseQRankSum=4.554;DP=428;FS=5.424;HRun=0;HaplotypeScore=108.8052;InbreedingCoeff=0.1423;MQ=44.47;MQ0=15;MQRankSum=-4.516;QD=8.05;ReadPosRankSum=-6.237;VQSLOD=0.4184;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:17:69.03:69,0,111	1/1:5,0:5:8.76:56,9,0	0/0:20,0:7:20.81:0,21,278	0/0:17,0:8:14.17:0,14,240	0/0:20,0:19:57.12:0,57,1050	0/1:15,0:14:33.80:34,0,80	0/1:16,0:13:54.46:96,0,54	1/1:22,0:16:39.98:283,40,0	0/1:11,0:9:3.18:3,0,87	0/0:25,0:23:63.99:0,64,1140	0/0:20,0:20:56.43:0,56,939	0/0:23,0:22:62.45:0,62,1091	0/1:15,1:16:87.74:99,0,88	0/1:17,0:14:13.53:14,0,157	1/1:1,16:17:27.09:435,27,0	0/0:28,0:27:81.15:0,81,1404	0/1:13,0:12:36.91:37,0,92	0/1:8,0:7:32.58:33,0,34	1/1:11,0:9:23.96:222,24,0	1/1:9,0:9:16.13:118,16,0	1/1:5,0:5:10.18:68,10,0	0/1:7,0:7:23.25:23,0,45	0/1:13,0:12:45.18:77,0,45	0/1:17,0:17:52.39:70,0,52	0/1:9,0:9:15.91:71,0,16	0/0:26,0:26:75.15:0,75,1416	1/1:14,0:13:33.49:340,33,0	0/0:5,0:5:15.05:0,15,339
chr10	102923278	.	CT	C	8376.63	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=11.637;DP=614;FS=5.810;HRun=1;HaplotypeScore=97.2386;InbreedingCoeff=0.9897;MQ=56.24;MQ0=7;MQRankSum=-0.519;QD=34.61;ReadPosRankSum=3.261;VQSLOD=4.7445;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:60.20:834,60,0	1/1:0,4:4:9.03:125,9,0	0/0:50,0:18:42.79:0,43,543	0/0:60,0:27:59.45:0,59,768	0/0:26,0:26:78.13:0,78,1084	1/1:0,21:21:51.17:710,51,0	1/1:1,22:23:54.18:752,54,0	0/0:21,0:21:36.19:0,36,667	1/1:0,19:19:48.16:661,48,0	0/0:17,0:17:50.85:0,51,669	0/0:18,0:18:48.11:0,48,648	0/0:26,0:26:75.23:0,75,1086	1/1:0,21:21:54.14:721,54,0	1/1:0,19:19:51.17:709,51,0	0/0:25,0:25:54.15:0,54,764	0/0:29,0:28:81.25:0,81,1177	1/1:5,20:25:74.82:979,75,0	1/1:0,19:19:48.16:658,48,0	0/0:20,0:20:51.12:0,51,695	0/0:14,0:14:36.04:0,36,471	0/0:19,0:19:49.50:0,50,781	1/1:1,17:17:36.12:499,36,0	1/1:0,11:11:33.07:436,33,0	1/1:0,20:20:51.13:687,51,0	1/1:0,17:17:45.11:605,45,0	0/0:20,0:19:57.19:0,57,854	0/0:20,0:20:57.09:0,57,767	0/0:7,0:6:15.05:0,15,224
chr10	102924230	.	TC	T	5196.59	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.055;DP=711;FS=2.360;HRun=5;HaplotypeScore=70.5109;InbreedingCoeff=0.9994;MQ=85.22;MQ0=0;MQRankSum=-2.371;QD=30.93;ReadPosRankSum=-0.646;VQSLOD=5.2003;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,1564	0/0:10,0:10:27.06:0,27,349	0/0:27,0:27:72.24:0,72,969	0/0:21,0:21:53.56:0,54,696	0/0:24,0:24:72.23:0,72,967	0/0:18,0:18:54.18:0,54,739	0/0:24,0:24:72.24:0,72,984	1/1:2,22:24:63.16:705,63,0	0/0:21,0:21:63.19:0,63,845	0/0:28,0:28:78.25:0,78,1054	0/0:10,0:10:24.08:0,24,327	0/0:22,0:22:66.21:0,66,876	0/0:31,0:31:93.28:0,93,1234	0/0:21,0:21:60.20:0,60,821	1/1:0,30:30:84.24:953,84,0	0/0:26,0:26:75.25:0,75,1026	0/0:44,0:44:99:0,123,1683	0/0:15,0:15:42.14:0,42,574	1/1:0,17:17:51.15:578,51,0	1/1:2,28:30:75.21:850,75,0	1/1:1,36:37:96.27:1089,96,0	0/0:27,0:27:75.25:0,75,1018	0/0:24,0:24:69.23:0,69,938	0/0:26,0:26:78.26:0,78,1067	0/0:27,0:27:78.26:0,78,1066	0/0:22,0:22:63.21:0,63,861	1/1:0,30:30:90.26:1021,90,0	0/0:33,0:33:90.28:0,90,1210
chr10	102925081	.	GCCCTCC	G	695.89	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=4.617;DP=242;FS=1.901;HRun=0;HaplotypeScore=51.7158;InbreedingCoeff=0.6780;MQ=73.06;MQ0=0;MQRankSum=2.327;QD=12.65;ReadPosRankSum=-2.597;VQSLOD=1.5974;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:38.99:0,39,722	0/0:2,0:2:6.02:0,6,132	0/0:8,0:6:11.79:0,12,156	0/0:12,0:10:15.51:0,16,244	0/0:4,0:4:8.45:0,8,152	0/0:11,0:11:18.49:0,18,267	0/0:30,0:30:84.13:0,84,1757	1/1:2,11:14:29.95:309,30,0	0/0:6,0:6:15.04:0,15,317	0/0:11,0:11:24.07:0,24,579	0/0:9,0:9:23.82:0,24,498	0/0:10,0:10:23.80:0,24,457	0/0:6,0:6:15.05:0,15,379	0/0:5,0:5:11.95:0,12,195	0/0:2,0:2:6.02:0,6,132	0/0:2,0:2:6.02:0,6,130	0/0:6,0:6:15.02:0,15,293	0/0:4,0:4:12.03:0,12,245	0/1:7,0:7:24.20:79,0,24	1/1:0,9:9:20.04:188,20,0	1/1:1,8:10:3.01:32,3,0	0/0:5,0:5:12.02:0,12,278	0/0:9,0:9:20.70:0,21,444	0/0:7,0:7:12.48:0,12,246	0/0:8,0:8:21.06:0,21,489	0/0:10,0:10:30.07:0,30,549	1/1:12,0:15:27.67:243,28,0	0/0:3,0:3:9.01:0,9,197
chr10	102925084	.	CT	C	640.03	PASS	AB=0.893;AC=12;AF=0.214;AN=56;BaseQRankSum=4.892;DP=239;FS=5.165;HRun=1;HaplotypeScore=32.2382;InbreedingCoeff=0.4608;MQ=69.40;MQ0=0;MQRankSum=1.742;QD=8.77;ReadPosRankSum=-1.254;VQSLOD=0.4985;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:14.69:0,15,252	0/0:2,0:2:5.79:0,6,35	0/0:7,0:5:14.34:0,14,78	0/0:11,0:9:14.68:0,15,140	0/1:5,0:5:7.44:7,0,48	0/0:10,0:10:17.97:0,18,146	0/0:29,0:29:75.55:0,76,577	1/1:13,0:13:29.91:237,30,0	0/1:7,0:7:6.98:7,0,78	0/0:11,0:11:23.96:0,24,212	0/0:9,0:9:22.24:0,22,171	0/1:9,0:9:9.46:9,0,125	0/0:6,0:6:14.92:0,15,117	0/0:5,0:5:11.88:0,12,93	0/0:2,0:2:5.68:0,6,36	0/0:2,0:2:1.54:0,2,22	0/0:6,0:6:1.54:0,2,61	0/0:4,0:4:11.98:0,12,97	0/1:2,6:8:3.72:78,0,4	1/1:9,0:9:21.26:143,21,0	1/1:10,0:10:2.99:23,3,0	0/0:5,0:5:11.71:0,12,82	0/0:9,0:9:8.95:0,9,133	0/0:8,0:8:12.12:0,12,115	0/0:8,0:8:20.99:0,21,186	0/0:12,0:12:33.01:0,33,296	1/1:12,0:12:35.91:294,36,0	0/0:3,0:3:8.97:0,9,70
chr10	102926544	.	A	AGTGTGT	2467.39	PASS	AB=0.686;AC=21;AF=0.389;AN=54;BaseQRankSum=-2.973;DP=786;FS=1.532;HRun=0;HaplotypeScore=160.5556;InbreedingCoeff=0.4089;MQ=51.98;MQ0=14;MQRankSum=-3.984;QD=6.56;ReadPosRankSum=-1.865;VQSLOD=2.3381;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:11.67:0,12,112	1/1:12,1:16:6.02:135,6,0	./.	0/0:40,0:3:2.84:0,3,35	0/0:3,0:5:9.03:0,9,144	0/1:15,1:20:0.39:31,0,0	0/1:38,2:62:99:153,0,196	1/1:25,0:23:20.07:423,20,0	0/0:14,0:27:13.05:0,13,191	0/0:16,0:18:21.06:0,21,325	0/0:6,0:7:6.02:0,6,94	0/0:26,0:28:30.10:0,30,578	0/0:17,0:27:2.05:0,2,4	0/1:12,2:30:99:132,0,116	1/1:11,9:26:26.27:810,26,0	0/0:20,0:20:42.13:0,42,766	0/1:19,0:38:65.93:109,0,66	0/1:21,0:33:36.99:37,0,132	1/1:17,0:17:9.92:196,10,0	1/1:7,2:12:5.17:129,5,0	1/1:31,2:38:3.01:39,3,0	0/0:18,1:26:1.67:0,2,4	1/1:16,0:19:3.48:39,3,0	0/0:39,20:64:0.41:0,0,38	0/0:27,3:33:10.80:0,11,187	0/0:17,0:16:18.06:0,18,366	1/1:11,7:21:18.05:405,18,0	0/0:11,0:11:8.80:0,9,127
chr10	102926649	.	GGTGTGTGT	G	2361.65	PASS	AB=0.873;AC=17;AF=0.327;AN=52;BaseQRankSum=2.431;DP=590;FS=61.342;HRun=0;HaplotypeScore=132.4902;InbreedingCoeff=0.0595;MQ=48.17;MQ0=13;MQRankSum=-6.455;QD=7.67;ReadPosRankSum=2.063;VQSLOD=0.1545;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,8:29:99:196,0,103	0/1:8,1:9:76.32:143,0,76	./.	./.	0/0:9,0:8:12.04:0,12,420	1/1:13,9:20:12.04:289,12,0	0/1:25,9:34:22.39:548,0,22	0/0:20,0:18:18.05:0,18,460	0/1:12,5:18:99:502,0,113	0/0:18,0:19:30.08:0,30,1008	0/0:6,0:6:9.03:0,9,310	0/0:21,0:21:48.16:0,48,1865	0/1:14,4:18:99:214,0,105	0/1:23,1:23:15.95:101,0,16	0/0:11,0:18:36.11:0,36,727	0/0:10,0:11:27.09:0,27,954	0/1:14,0:16:16.56:17,0,257	0/1:19,1:15:99:110,0,171	0/0:16,0:19:24.08:0,24,631	0/0:3,0:10:3.71:0,4,12	0/0:41,0:55:23.99:0,24,632	1/1:14,7:17:3.01:76,3,0	1/1:4,3:8:2.71:67,3,0	0/1:38,2:35:92.22:210,0,92	1/1:13,7:20:3.01:50,3,0	0/0:8,0:7:15.05:0,15,588	0/0:7,0:7:9.03:0,9,313	0/0:13,0:14:30.01:0,30,1015
chr10	102926661	.	T	TGTGT	703.42	PASS	AB=0.998;AC=15;AF=0.288;AN=52;BaseQRankSum=-2.209;DP=578;FS=21.905;HRun=0;HaplotypeScore=130.0818;InbreedingCoeff=0.1804;MQ=47.26;MQ0=19;MQRankSum=-1.077;QD=2.46;ReadPosRankSum=-1.660;VQSLOD=0.9070;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:29:15.41:0,15,126	0/1:6,0:6:39.93:40,0,47	./.	./.	0/0:10,0:9:9.49:0,9,118	0/0:20,0:17:6.95:0,7,58	0/1:35,0:33:21.78:22,0,137	0/1:13,0:11:0:0,0,0	0/1:25,0:24:29.55:30,0,132	0/0:17,0:15:20.45:0,20,240	0/0:4,0:4:9.02:0,9,115	0/0:25,0:24:42.13:0,42,639	0/1:21,0:17:59.85:60,0,71	0/0:19,0:17:1.88:0,2,7	0/0:19,0:19:21.50:0,21,196	0/0:13,0:12:15.04:0,15,205	0/1:20,0:19:12.74:113,0,13	0/1:22,0:17:0.42:0,0,22	1/1:18,0:15:13.81:201,14,0	0/1:13,0:13:0:0,0,0	1/1:56,0:48:13.44:117,13,0	0/0:24,0:20:3:0,3,28	0/0:10,0:10:2.44:0,2,8	0/1:44,0:38:44.71:111,0,45	0/0:20,0:19:0:0,0,0	0/0:13,0:12:3:0,3,47	1/1:6,5:11:8.77:154,9,0	0/0:13,0:12:11.14:0,11,248
chr10	102926877	.	A	AGG	3144.48	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-9.690;DP=539;FS=13.094;HRun=6;HaplotypeScore=67.8706;InbreedingCoeff=0.9987;MQ=75.79;MQ0=0;MQRankSum=-0.322;QD=36.99;ReadPosRankSum=-0.849;VQSLOD=1.9954;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,1279	0/0:10,0:10:24.05:0,24,270	0/0:20,0:20:39.83:0,40,409	0/0:15,0:14:32.31:0,32,322	0/0:16,0:16:45.14:0,45,548	0/0:24,0:24:63.19:0,63,768	0/0:29,0:29:81.23:0,81,974	1/1:8,14:22:39.58:629,40,0	0/0:13,0:13:39.12:0,39,475	0/0:15,0:15:36.10:0,36,439	0/0:19,0:19:51.16:0,51,620	0/0:30,0:30:87.22:0,87,1013	0/0:15,0:15:42.12:0,42,500	0/0:18,0:18:45.12:0,45,537	0/0:28,0:28:78.24:0,78,948	0/0:18,0:18:54.17:0,54,658	0/0:32,0:32:93.29:0,93,1134	0/0:15,0:15:39.12:0,39,475	1/1:2,14:16:42.12:650,42,0	1/1:1,9:10:24.08:392,24,0	1/1:1,22:23:57.19:961,57,0	0/0:13,0:13:36.11:0,36,437	0/0:12,0:12:36.11:0,36,432	0/0:19,0:19:48.10:0,48,558	0/0:22,0:22:63.19:0,63,768	0/0:22,0:22:60.18:0,60,721	1/1:0,13:13:42.14:689,42,0	0/0:10,0:10:30.09:0,30,366
chr10	102928468	.	AG	A	4768.08	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.926;DP=634;FS=1.515;HRun=6;HaplotypeScore=64.8461;InbreedingCoeff=0.9997;MQ=86.24;MQ0=1;MQRankSum=-1.976;QD=29.25;ReadPosRankSum=1.428;VQSLOD=5.6051;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,108,1389	0/0:10,0:10:30.10:0,30,392	0/0:20,0:20:57.17:0,57,725	0/0:23,0:23:50.66:0,51,696	0/0:17,0:17:51.15:0,51,655	0/0:16,0:16:48.16:0,48,631	0/0:24,0:24:63.20:0,63,826	1/1:2,27:29:81.20:870,81,0	0/0:29,0:29:81.25:0,81,1046	0/0:21,0:21:54.18:0,54,706	0/0:11,0:11:30.08:0,30,374	0/0:23,0:23:60.20:0,60,790	0/0:22,0:22:66.20:0,66,848	0/0:27,0:27:81.25:0,81,1040	1/1:2,28:28:81.20:870,81,0	0/0:24,0:24:66.20:0,66,852	0/0:19,0:19:51.15:0,51,656	0/0:22,0:22:57.17:0,57,734	1/1:2,18:20:54.14:580,54,0	1/1:2,17:19:48.12:515,48,0	1/1:1,44:45:99:1386,129,0	0/0:16,0:16:45.14:0,45,582	0/0:11,0:11:30.10:0,30,393	0/0:26,0:26:78.24:0,78,1008	0/0:20,0:20:57.18:0,57,747	0/0:28,0:28:78.21:0,78,999	1/1:2,18:20:51.13:548,51,0	0/0:22,0:22:63.16:0,63,781
chr10	102928667	.	ACACG	A	3901.91	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.314;DP=708;FS=4.847;HRun=0;HaplotypeScore=115.4220;InbreedingCoeff=0.9542;MQ=60.66;MQ0=9;MQRankSum=0.803;QD=24.09;ReadPosRankSum=-0.228;VQSLOD=3.2789;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:81.23:0,81,1732	0/0:11,0:11:33.11:0,33,747	0/0:14,0:2:3.01:0,3,37	0/0:28,0:11:14.12:0,14,308	0/0:14,0:14:18.06:0,18,394	0/0:15,0:15:33.10:0,33,747	0/0:56,0:56:99:0,108,2384	1/1:13,17:30:51.11:737,51,0	0/0:27,0:27:51.17:0,51,1168	0/0:27,0:26:51.17:0,51,1182	0/0:11,0:11:30.10:0,30,698	0/0:30,0:30:66.23:0,66,1572	0/0:21,0:21:45.15:0,45,1054	0/0:33,0:33:60.16:0,60,1369	1/1:5,26:30:54.18:899,54,0	0/0:25,0:25:63.22:0,63,1541	0/0:33,0:33:75.20:0,75,1715	0/0:26,0:26:60.21:0,60,1403	1/1:9,8:16:24.08:372,24,0	1/1:6,16:22:24.08:399,24,0	1/1:6,39:45:71.33:1196,71,0	0/0:24,0:24:57.20:0,57,1374	0/0:22,0:22:48.16:0,48,1166	0/0:33,0:33:72.04:0,72,1753	0/0:21,0:21:36.10:0,36,809	0/0:26,0:25:60.20:0,60,1282	1/1:6,11:17:18.06:300,18,0	0/0:10,0:10:15.05:0,15,348
chr10	102930126	.	TG	T	8944.98	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=20.909;DP=716;FS=0.288;HRun=1;HaplotypeScore=138.7785;InbreedingCoeff=0.9908;MQ=91.33;MQ0=0;MQRankSum=-5.254;QD=31.50;ReadPosRankSum=5.706;VQSLOD=4.3756;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,36:43:99:1282,107,0	1/1:0,8:8:17.72:233,18,0	0/0:35,0:35:99:0,105,1640	0/0:28,0:28:84.28:0,84,1316	0/0:19,0:19:57.18:0,57,882	1/1:2,15:17:40.21:454,40,0	1/1:2,11:13:37.89:452,38,0	0/0:36,0:36:99:0,105,1629	1/1:2,15:17:45.14:574,45,0	0/0:27,0:27:81.28:0,81,1290	0/0:18,0:18:54.18:0,54,863	0/0:41,0:41:99:0,120,1905	1/1:3,26:29:84.24:1050,84,0	1/1:4,26:30:70.99:871,71,0	0/0:29,0:29:87.28:0,87,1368	0/0:26,0:26:78.27:0,78,1237	1/1:1,31:32:84.23:1061,84,0	1/1:1,30:31:78.20:990,78,0	0/0:17,0:17:51.16:0,51,784	0/0:25,0:25:75.26:0,75,1193	0/0:70,0:70:99:0,208,3227	1/1:1,15:16:42.09:525,42,0	1/1:2,13:15:32.47:395,32,0	1/1:5,23:28:77.43:943,77,0	1/1:0,4:4:9.03:117,9,0	0/0:22,0:22:66.23:0,66,1056	0/0:22,0:22:66.23:0,66,1054	0/0:17,0:17:51.17:0,51,815
chr10	102930128	.	C	CTT	10273.17	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=20.412;DP=726;FS=6.796;HRun=1;HaplotypeScore=152.9613;InbreedingCoeff=0.9951;MQ=92.85;MQ0=0;MQRankSum=-6.229;QD=35.92;ReadPosRankSum=3.225;VQSLOD=5.0469;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:39,5:43:99:1498,117,0	1/1:8,0:8:20.77:254,21,0	0/0:39,0:39:99:0,105,1561	0/0:29,0:29:84.28:0,84,1267	0/0:20,0:20:57.18:0,57,850	1/1:16,2:18:48.10:657,48,0	1/1:11,2:13:39.13:578,39,0	0/0:33,0:33:93.28:0,93,1365	1/1:15,1:16:48.11:635,48,0	0/0:28,0:28:81.27:0,81,1240	0/0:21,0:21:57.15:0,57,847	0/0:42,0:42:99:0,117,1769	1/1:30,0:30:87.23:1102,87,0	1/1:27,3:30:87.07:1078,87,0	0/0:29,0:29:87.30:0,87,1331	0/0:27,0:27:72.23:0,72,1080	1/1:31,1:32:84.24:1081,84,0	1/1:30,0:30:78.25:1074,78,0	0/0:16,0:16:42.14:0,42,622	0/0:25,0:25:72.24:0,72,1100	0/0:68,0:68:99:0,199,3023	1/1:16,1:17:49.60:566,50,0	1/1:15,1:16:42.03:511,42,0	1/1:26,2:28:81.22:1109,81,0	1/1:4,0:4:11.99:131,12,0	0/0:22,0:22:66.21:0,66,991	0/0:22,0:22:66.22:0,66,1011	0/0:19,0:19:57.15:0,57,827
chr10	102931423	.	ATCAAGC	A	13099.24	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=17.288;DP=584;FS=0.000;HRun=0;HaplotypeScore=141.4342;InbreedingCoeff=0.9964;MQ=92.64;MQ0=0;MQRankSum=-18.469;QD=55.51;ReadPosRankSum=3.830;VQSLOD=5.0190;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:27:57.20:1330,57,0	1/1:0,6:6:18.06:432,18,0	0/0:26,0:26:61.93:0,62,2302	0/0:31,0:31:78.74:0,79,2515	0/0:14,0:14:42.14:0,42,1504	1/1:1,19:20:57.20:1352,57,0	1/1:6,18:24:48.16:1149,48,0	0/0:40,0:40:99:0,120,4138	1/1:0,23:23:66.23:1583,66,0	0/0:14,0:14:42.14:0,42,1514	0/0:12,0:12:36.12:0,36,1292	0/0:23,0:23:69.24:0,69,2487	1/1:1,17:18:48.16:1153,48,0	1/1:0,20:20:54.19:1297,54,0	0/0:22,0:22:63.22:0,63,2213	0/0:21,0:21:63.22:0,63,2272	1/1:2,23:25:57.20:1365,57,0	1/1:2,19:21:48.16:1135,48,0	0/0:19,0:19:57.16:0,57,1851	0/0:25,0:25:69.24:0,69,2382	0/0:42,0:42:99:0,126,4467	1/1:0,8:8:18.06:430,18,0	1/1:0,15:15:33.11:793,33,0	1/1:3,14:17:17.88:432,18,0	1/1:0,12:12:27.09:648,27,0	0/0:28,0:28:81.28:0,81,2857	0/0:16,0:16:48.15:0,48,1622	0/0:15,0:14:42.14:0,42,1448
chr10	102932914	.	CCCTGGCTTGGAGCT	C	26190.44	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=16.008;DP=486;FS=0.000;HRun=0;HaplotypeScore=230.2495;InbreedingCoeff=0.9672;MQ=79.86;MQ0=0;MQRankSum=-15.645;QD=80.59;ReadPosRankSum=4.870;VQSLOD=4.1774;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:33.11:1379,33,0	1/1:0,9:9:24.04:842,24,0	0/0:16,0:16:48.16:0,48,2584	0/0:24,0:24:66.16:0,66,3944	0/0:15,0:15:45.14:0,45,2901	1/1:0,23:23:48.16:1949,48,0	1/1:0,22:22:39.13:1712,39,0	1/1:0,16:16:47.94:1158,48,0	1/1:0,24:24:51.18:2208,51,0	0/0:19,0:19:54.19:0,54,3616	0/0:13,0:13:36.12:0,36,2274	0/0:31,0:31:93.32:0,93,6586	1/1:1,26:27:54.19:2383,54,0	1/1:0,18:18:39.13:1687,39,0	1/1:0,22:22:57.20:2490,57,0	0/0:19,0:19:57.20:0,57,4075	1/1:0,17:17:36.12:1475,36,0	1/1:0,3:3:3.01:133,3,0	1/1:0,10:10:29.95:667,30,0	1/1:0,18:18:33.11:1391,33,0	1/1:1,13:14:14.91:606,15,0	1/1:0,12:12:30.10:1302,30,0	1/1:0,17:17:21.07:928,21,0	1/1:0,11:11:21.07:857,21,0	1/1:0,12:12:33.11:1433,33,0	0/0:17,0:17:51.16:0,51,3038	1/1:0,26:26:36.12:1591,36,0	0/0:7,0:7:17.96:0,18,1301
chr10	102933523	.	CA	C	9351.04	PASS	AB=0.818;AC=25;AF=0.446;AN=56;BaseQRankSum=12.165;DP=561;FS=0.656;HRun=1;HaplotypeScore=54.2556;InbreedingCoeff=0.9142;MQ=83.73;MQ0=0;MQRankSum=-0.362;QD=35.02;ReadPosRankSum=2.698;VQSLOD=4.6696;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,43:43:99:1514,110,0	1/1:0,11:11:30.10:407,30,0	0/0:18,0:18:51.11:0,51,699	0/0:17,0:17:45.06:0,45,574	0/0:19,0:19:57.18:0,57,887	1/1:0,18:18:48.16:671,48,0	1/1:0,21:21:57.19:797,57,0	0/0:22,0:22:63.18:0,63,907	1/1:0,25:25:66.22:923,66,0	0/0:16,0:16:48.16:0,48,750	0/0:12,0:12:36.12:0,36,573	0/0:29,0:29:87.28:0,87,1362	1/1:0,23:23:60.20:838,60,0	0/0:24,0:24:69.24:0,69,1099	0/0:18,0:18:54.17:0,54,840	0/1:7,2:9:17.88:18,0,312	1/1:0,21:21:57.19:797,57,0	1/1:0,30:30:78.26:1087,78,0	0/0:12,0:12:36.12:0,36,576	0/0:23,0:23:69.22:0,69,1070	0/0:28,0:27:84.29:0,84,1331	1/1:0,10:10:27.09:377,27,0	1/1:0,11:11:27.09:371,27,0	1/1:0,28:28:63.21:881,63,0	1/1:0,17:17:48.16:671,48,0	0/0:25,0:25:75.24:0,75,1175	0/0:29,0:29:87.30:0,87,1384	0/0:2,0:2:6.02:0,6,96
chr10	102935153	.	C	CCAGTT	32072.95	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-10.891;DP=611;FS=5.902;HRun=0;HaplotypeScore=103.7117;InbreedingCoeff=0.9974;MQ=81.95;MQ0=1;MQRankSum=-10.744;QD=73.73;ReadPosRankSum=4.375;VQSLOD=6.5216;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,36:45:99:3200,111,0	1/1:2,4:6:15.05:479,15,0	0/0:23,0:22:60.18:0,60,1213	0/0:27,0:27:69.21:0,69,1378	0/0:17,0:17:48.10:0,48,932	1/1:0,13:13:39.13:1231,39,0	1/1:6,14:21:54.14:1580,54,0	1/1:5,19:30:84.25:2284,84,0	1/1:3,17:21:57.19:1757,57,0	0/0:24,0:24:66.11:0,66,1328	0/0:20,0:20:57.14:0,57,1127	0/0:18,0:18:51.17:0,51,1102	1/1:1,19:23:45.15:1450,45,0	1/1:3,13:16:45.15:1303,45,0	1/1:4,21:25:75.26:2168,75,0	0/0:17,0:17:51.15:0,51,1035	1/1:4,37:44:99:3372,105,0	1/1:0,18:19:54.19:1718,54,0	1/1:8,13:25:72.24:1985,72,0	1/1:6,13:20:48.16:1253,48,0	1/1:5,15:22:47.17:1292,47,0	1/1:3,14:21:54.02:1391,54,0	1/1:4,15:21:48.16:1321,48,0	1/1:2,16:19:39.60:1201,40,0	1/1:3,14:18:45.02:1203,45,0	0/0:19,0:19:51.17:0,51,1104	1/1:4,18:26:63.22:1883,63,0	0/0:11,0:11:33.11:0,33,707
chr10	102935544	.	TTC	T	14312.04	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=10.995;DP=720;FS=9.946;HRun=0;HaplotypeScore=109.5891;InbreedingCoeff=0.9952;MQ=81.17;MQ0=3;MQRankSum=-3.526;QD=29.69;ReadPosRankSum=5.201;VQSLOD=6.3291;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,32:38:65.55:952,66,0	1/1:1,5:6:15.05:193,15,0	0/0:41,1:38:35.19:0,35,1049	0/0:52,0:44:62.62:0,63,1120	0/0:17,0:17:45.14:0,45,725	1/1:3,18:21:48.16:617,48,0	1/1:2,21:23:57.18:731,57,0	1/1:4,27:31:78.13:927,78,0	1/1:4,25:29:72.23:926,72,0	0/0:20,1:21:18.56:0,19,804	0/0:8,0:8:24.08:0,24,405	0/0:28,0:28:81.26:0,81,1328	1/1:2,24:26:63.20:810,63,0	1/1:4,22:26:60.20:772,60,0	1/1:0,19:18:51.17:656,51,0	0/0:30,1:31:42.65:0,43,1246	1/1:3,39:41:99:1428,111,0	1/1:1,21:22:54.18:695,54,0	1/1:4,14:18:39.11:487,39,0	1/1:2,17:19:42.10:523,42,0	1/1:8,31:39:84.27:1081,84,0	1/1:2,21:23:57.14:714,57,0	1/1:5,11:16:27.56:348,28,0	1/1:2,29:31:72.23:927,72,0	1/1:4,24:28:60.19:771,60,0	0/0:29,0:29:75.25:0,75,1243	1/1:3,22:25:60.15:753,60,0	0/0:9,0:9:21.04:0,21,302
chr10	102936334	.	T	TG	14266.79	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=17.743;DP=708;FS=10.070;HRun=5;HaplotypeScore=145.0791;InbreedingCoeff=0.9977;MQ=77.48;MQ0=6;MQRankSum=-4.816;QD=30.48;ReadPosRankSum=1.883;VQSLOD=2.9251;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,22:25:60.19:784,60,0	1/1:0,8:8:24.08:316,24,0	0/0:25,0:25:66.15:0,66,700	0/0:38,0:38:87.11:0,87,915	0/0:22,0:22:57.12:0,57,602	1/1:2,17:18:42.14:553,42,0	1/1:3,29:32:72.23:945,72,0	1/1:6,16:22:51.13:636,51,0	1/1:4,23:26:42.93:890,43,0	0/0:31,0:31:87.22:0,87,935	0/0:18,0:18:48.12:0,48,515	0/0:31,0:31:87.20:0,87,926	1/1:3,28:31:84.27:1102,84,0	1/1:2,27:27:69.22:906,69,0	1/1:2,25:26:66.21:868,66,0	0/0:24,0:24:63.16:0,63,677	1/1:4,33:37:96.31:1261,96,0	1/1:1,30:31:84.27:1105,84,0	1/1:2,12:13:39.07:485,39,0	1/1:3,18:21:45.13:577,45,0	1/1:4,55:58:99:1552,120,0	1/1:4,15:19:36.12:469,36,0	1/1:3,14:16:36.11:459,36,0	1/1:3,18:21:45.14:581,45,0	1/1:3,15:18:42.13:543,42,0	0/0:42,0:42:99:0,102,1086	1/1:1,8:8:18.06:236,18,0	0/0:9,0:9:21.05:0,21,226
chr10	102936449	.	TGCC	T	1111.55	PASS	AB=0.996;AC=11;AF=0.196;AN=56;BaseQRankSum=-3.501;DP=575;FS=1.827;HRun=0;HaplotypeScore=196.5383;InbreedingCoeff=-0.0325;MQ=72.04;MQ0=0;MQRankSum=-2.241;QD=4.56;ReadPosRankSum=-5.664;VQSLOD=0.9758;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:37.94:0,38,393	0/0:10,0:10:19.89:0,20,135	0/0:18,0:18:54.18:0,54,1127	0/0:20,0:20:48.06:0,48,964	0/0:15,0:15:42.14:0,42,873	0/0:21,0:20:50.01:0,50,366	0/1:32,0:32:99:274,0,202	0/1:23,1:24:76.63:77,0,153	0/0:22,0:21:49.18:0,49,360	0/0:17,0:17:51.17:0,51,1121	0/0:10,0:10:30.10:0,30,643	0/0:27,0:27:75.26:0,75,1696	0/0:11,0:11:31.54:0,32,201	0/0:18,0:18:3.16:0,3,165	0/0:20,0:20:25.69:0,26,246	0/0:21,0:21:57.20:0,57,1217	1/1:2,9:11:30.10:461,30,0	0/1:15,0:15:91.96:92,0,121	0/1:15,0:15:32.86:33,0,65	0/0:17,0:17:44.28:0,44,219	0/1:41,0:41:99:132,0,337	0/1:27,0:27:26.80:27,0,196	0/1:20,0:20:39.90:40,0,178	0/1:32,0:32:99:110,0,276	0/1:27,0:27:20.96:21,0,180	0/0:22,0:22:63.21:0,63,1359	0/0:13,0:13:31.91:0,32,212	0/0:19,0:19:57.19:0,57,1250
chr10	102936481	.	CTG	C	17100.37	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=15.221;DP=637;FS=0.326;HRun=0;HaplotypeScore=139.4759;InbreedingCoeff=0.9986;MQ=68.85;MQ0=2;MQRankSum=-6.856;QD=38.34;ReadPosRankSum=2.580;VQSLOD=6.4990;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:34:87.29:1280,87,0	1/1:1,14:15:42.14:607,42,0	0/0:26,1:26:63.22:0,63,1128	0/0:34,0:33:81.26:0,81,1440	0/0:18,0:18:54.19:0,54,1007	1/1:2,19:19:42.14:618,42,0	1/1:1,29:30:78.26:1147,78,0	1/1:3,22:25:66.21:953,66,0	1/1:0,21:21:60.20:883,60,0	0/0:21,0:21:60.21:0,60,1116	0/0:6,0:6:18.06:0,18,337	0/0:27,0:27:81.28:0,81,1497	1/1:1,18:18:45.15:662,45,0	1/1:0,25:25:66.18:947,66,0	1/1:1,24:25:69.23:1016,69,0	0/0:14,0:14:42.14:0,42,787	1/1:2,10:12:29.67:419,30,0	1/1:1,16:17:39.13:574,39,0	1/1:4,11:15:33.11:486,33,0	1/1:0,18:18:51.17:751,51,0	1/1:0,40:40:99:1458,99,0	1/1:2,26:28:75.25:1105,75,0	1/1:1,24:24:72.24:1060,72,0	1/1:1,36:37:99:1546,105,0	1/1:1,25:26:72.22:1060,72,0	0/0:26,0:26:78.27:0,78,1456	1/1:0,13:13:36.12:529,36,0	0/0:18,0:18:51.14:0,51,891
chr10	102936565	.	TTC	T	272.14	PASS	AB=0.951;AC=14;AF=0.269;AN=52;BaseQRankSum=0.842;DP=503;FS=8.220;HRun=0;HaplotypeScore=105.7810;InbreedingCoeff=-0.0396;MQ=58.62;MQ0=26;MQRankSum=0.295;QD=1.45;ReadPosRankSum=1.295;VQSLOD=1.5363;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:11:6.02:0,6,87	0/1:5,1:6:24.09:24,0,81	./.	0/0:64,0:24:0:0,0,0	0/1:13,1:14:18.12:18,0,149	0/0:19,1:18:6.85:0,7,181	0/1:17,1:18:10.03:10,0,201	0/1:22,0:20:18.90:19,0,90	0/0:14,0:14:12.03:0,12,156	0/1:17,2:19:26.45:26,0,372	0/0:10,0:10:15:0,15,194	0/1:19,0:19:9.93:10,0,220	0/0:14,0:13:8.62:0,9,94	0/1:13,1:13:18.05:18,0,143	0/0:16,0:14:5.84:0,6,43	1/1:8,9:17:18.93:201,19,0	0/1:17,0:17:6.61:21,0,7	0/1:15,0:15:22.02:22,0,155	0/0:14,0:12:14.95:0,15,136	1/1:12,0:10:5.80:34,6,0	./.	0/1:14,1:14:18.05:18,0,161	0/0:8,0:7:3:0,3,25	0/0:25,0:25:15.04:0,15,226	0/0:14,0:14:5.98:0,6,48	0/0:19,0:19:23.91:0,24,271	0/0:12,0:10:10.97:0,11,78	0/0:21,0:18:27.03:0,27,342
chr10	102936629	.	T	TTC	2960.46	PASS	AB=0.874;AC=29;AF=0.518;AN=56;BaseQRankSum=9.448;DP=543;FS=13.559;HRun=0;HaplotypeScore=187.9875;InbreedingCoeff=0.0960;MQ=46.45;MQ0=22;MQRankSum=-8.875;QD=7.51;ReadPosRankSum=-8.468;VQSLOD=-0.1137;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:10,4:14:14.13:181,0,14	1/1:5,1:6:7.27:84,7,0	0/1:43,0:8:0.80:1,0,105	0/1:71,1:13:19.71:20,0,28	0/0:26,0:25:54.17:0,54,696	1/1:14,10:22:27.61:492,28,0	0/1:9,3:13:10.02:176,0,10	0/1:23,0:23:36.03:36,0,194	1/1:8,4:11:9.57:234,10,0	0/0:33,0:32:50.99:0,51,818	0/0:16,0:15:42.33:0,42,497	0/0:25,0:25:54.16:0,54,696	1/1:6,4:10:20.41:236,20,0	1/1:12,1:12:19.21:187,19,0	0/1:12,6:16:9.66:234,0,10	0/0:16,0:16:18.42:0,18,411	0/1:10,2:11:49.26:49,0,78	0/1:15,4:19:45.37:228,0,45	0/1:15,0:12:71.91:72,0,78	0/1:11,3:13:30.49:174,0,30	0/1:10,3:13:2.91:85,0,3	1/1:13,3:16:6.06:263,6,0	0/1:15,1:15:6.98:73,0,7	0/1:16,3:19:13.44:25,0,13	1/1:9,3:12:3.82:174,4,0	0/0:17,0:17:44.87:0,45,539	1/1:3,2:5:9.03:118,9,0	0/0:16,0:16:39.52:0,40,445
chr10	102936637	.	CTG	C	3608.24	PASS	AB=0.893;AC=34;AF=0.607;AN=56;BaseQRankSum=10.404;DP=520;FS=0.000;HRun=0;HaplotypeScore=193.4197;InbreedingCoeff=0.5090;MQ=46.22;MQ0=20;MQRankSum=-9.932;QD=10.77;ReadPosRankSum=-4.706;VQSLOD=2.0757;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,3:16:26.58:218,27,0	1/1:2,1:3:6.02:78,6,0	0/0:40,0:7:14.76:0,15,203	0/1:69,0:14:26.40:26,0,40	0/0:28,0:28:71.77:0,72,1167	1/1:17,5:21:52.77:577,53,0	1/1:13,0:13:2.90:113,3,0	0/1:15,4:18:99:114,0,139	1/1:9,2:11:25.17:285,25,0	0/0:28,0:27:52.96:0,53,1229	0/0:17,0:16:24.09:0,24,718	0/0:23,0:23:60.09:0,60,1044	1/1:11,3:14:15.43:231,15,0	1/1:11,4:14:22.51:275,23,0	1/1:14,3:16:9.87:219,10,0	0/0:13,0:13:23.18:0,23,650	0/1:14,0:12:30.48:35,0,30	1/1:18,1:19:21.19:280,21,0	0/1:9,3:9:85.34:109,0,85	0/1:13,2:14:3.44:164,0,3	1/1:11,2:13:16.57:120,17,0	1/1:9,6:15:28.31:304,28,0	1/1:7,8:14:12.01:116,12,0	0/1:14,3:17:25.27:25,0,39	1/1:7,3:10:19.60:209,20,0	0/0:19,0:19:22.29:0,22,779	1/1:4,1:5:9.03:108,9,0	0/0:16,0:15:39.07:0,39,642
chr10	102936650	.	T	TTG	1270.33	PASS	AB=0.929;AC=28;AF=0.500;AN=56;BaseQRankSum=11.647;DP=498;FS=9.708;HRun=0;HaplotypeScore=206.7115;InbreedingCoeff=0.0509;MQ=49.06;MQ0=24;MQRankSum=-9.083;QD=3.69;ReadPosRankSum=-0.645;VQSLOD=1.8199;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:21.09:126,21,0	1/1:4,0:4:0.47:1,0,0	0/1:36,0:7:7.22:7,0,113	0/1:71,0:13:4.74:5,0,36	0/0:29,0:29:75.13:0,75,1184	0/1:21,0:20:50.61:92,0,51	1/1:10,0:10:2.97:18,3,0	0/0:11,0:10:2.28:0,2,89	0/1:13,0:13:19.82:73,0,20	0/0:27,0:26:81.26:0,81,1250	0/0:17,0:16:45.15:0,45,731	0/0:22,0:22:63.21:0,63,1012	0/1:14,0:13:28.45:28,0,61	0/1:17,0:17:8.98:9,0,56	1/1:15,4:19:16.34:278,16,0	0/0:14,0:14:39.12:0,39,605	0/1:7,5:10:99:122,0,101	0/1:16,1:17:72.36:136,0,72	0/1:10,4:9:57.59:212,0,58	1/1:13,0:12:10.28:49,10,0	0/1:11,2:13:5.09:7,0,5	1/1:14,0:14:9.59:65,10,0	0/1:11,0:10:14.39:42,0,14	0/1:10,2:12:11.43:89,0,11	1/1:10,0:10:0.09:26,0,0	0/0:19,0:19:57.19:0,57,916	1/1:5,1:6:1.46:54,1,0	0/0:15,0:14:37.37:0,37,586
chr10	102936661	.	GTTTCTC	G	6387.29	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=12.873;DP=499;FS=0.000;HRun=0;HaplotypeScore=217.6557;InbreedingCoeff=0.8030;MQ=58.05;MQ0=16;MQRankSum=-13.400;QD=25.96;ReadPosRankSum=1.308;VQSLOD=4.4016;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,3:17:30.10:489,30,0	1/1:3,0:3:8.96:106,9,0	0/0:35,0:14:7.06:0,7,158	0/0:67,0:20:11.30:0,11,153	0/0:29,0:29:78.18:0,78,2157	1/1:14,0:14:35.33:503,35,0	1/1:9,1:10:27.09:395,27,0	1/1:16,0:13:33.08:448,33,0	1/1:13,0:13:32.30:390,32,0	0/0:28,0:28:66.87:0,67,2403	0/0:17,0:17:33.12:0,33,1109	0/0:22,0:22:56.15:0,56,1637	1/1:16,0:15:20.72:479,21,0	1/1:14,0:14:32.94:436,33,0	1/1:22,0:22:24.22:577,24,0	0/0:14,0:14:39.13:0,39,1137	1/1:8,0:10:15.20:218,15,0	1/1:11,4:15:40.50:588,40,0	0/1:12,0:9:10.84:281,0,11	1/1:14,1:14:21.07:314,21,0	1/1:15,0:15:9.22:149,9,0	1/1:9,0:9:14.93:223,15,0	1/1:10,0:10:12.42:168,12,0	0/1:13,0:13:38.79:54,0,39	1/1:9,0:9:17.99:250,18,0	0/0:23,0:23:69.20:0,69,1816	1/1:11,0:11:24.01:319,24,0	0/0:14,0:13:35.09:0,35,759
chr10	102936663	.	TTCTCTC	T	10179.39	PASS	AB=0.813;AC=37;AF=0.661;AN=56;BaseQRankSum=12.698;DP=507;FS=0.412;HRun=0;HaplotypeScore=206.2267;InbreedingCoeff=0.8637;MQ=57.72;MQ0=17;MQRankSum=-13.811;QD=40.39;ReadPosRankSum=-2.641;VQSLOD=4.1956;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,12:16:44.94:728,45,0	1/1:1,2:3:9.03:166,9,0	0/0:35,0:13:4.51:0,5,173	0/0:75,0:21:16.61:0,17,295	0/0:27,0:29:68.91:0,69,2010	1/1:4,11:15:42.05:778,42,0	1/1:1,9:10:30.07:592,30,0	1/1:7,13:17:45.15:881,45,0	1/1:4,9:13:29.92:568,30,0	0/0:27,0:27:72.25:0,72,2313	0/0:16,0:16:36.12:0,36,1005	0/0:21,0:21:45.15:0,45,1455	1/1:3,13:15:39.08:735,39,0	1/1:3,11:14:18.67:660,19,0	1/1:4,19:23:62.93:1023,63,0	0/0:13,0:14:39.13:0,39,1164	1/1:10,2:10:4.35:320,4,0	1/1:11,5:16:26.30:699,26,0	1/1:4,7:9:21.07:453,21,0	1/1:5,10:14:32.98:547,33,0	1/1:8,7:15:20.94:278,21,0	1/1:2,7:9:23.48:372,23,0	1/1:5,5:10:20.97:301,21,0	0/1:10,3:13:32.20:133,0,32	1/1:2,7:9:23.93:396,24,0	0/0:21,0:23:60.20:0,60,1752	1/1:0,11:11:33:550,33,0	0/0:13,0:13:24.08:0,24,674
chr10	102936669	.	C	CTCTCTGTT	14418.09	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=11.864;DP=549;FS=6.119;HRun=0;HaplotypeScore=220.0094;InbreedingCoeff=0.8494;MQ=59.26;MQ0=18;MQRankSum=-14.019;QD=52.62;ReadPosRankSum=-4.253;VQSLOD=3.3823;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:44.92:915,45,0	1/1:3,0:3:9.03:226,9,0	0/0:47,0:17:14.17:0,14,267	0/0:85,0:23:10.96:0,11,360	0/0:29,0:29:72.70:0,73,1807	1/1:15,0:15:45.04:1316,45,0	1/1:10,0:10:30.06:793,30,0	1/1:29,0:25:60.20:1139,60,0	1/1:13,0:13:36.01:931,36,0	0/0:26,0:26:78.26:0,78,1987	0/0:17,0:17:45.13:0,45,949	0/0:19,0:19:51.11:0,51,1271	1/1:19,0:18:44.99:1057,45,0	1/1:17,0:17:5.53:980,6,0	1/1:25,0:25:68.86:1432,69,0	0/0:14,0:14:42.13:0,42,1036	0/1:11,0:9:84.07:263,0,84	1/1:13,3:16:22.92:882,23,0	1/1:13,0:11:0.93:442,1,0	1/1:19,0:18:38.96:894,39,0	1/1:13,2:15:23.95:462,24,0	1/1:8,0:8:23.99:627,24,0	1/1:9,0:9:23.95:484,24,0	1/1:9,5:14:20.60:235,21,0	1/1:9,0:9:23.93:613,24,0	0/0:25,0:25:69.22:0,69,1631	1/1:13,0:13:38.99:726,39,0	0/0:13,0:13:24.08:0,24,601
chr10	102936697	.	GTCTC	G	5216.35	PASS	AB=0.696;AC=23;AF=0.411;AN=56;BaseQRankSum=10.250;DP=638;FS=4.133;HRun=0;HaplotypeScore=240.0431;InbreedingCoeff=0.9013;MQ=57.74;MQ0=14;MQRankSum=-10.640;QD=30.87;ReadPosRankSum=2.482;VQSLOD=4.5557;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,15:22:11.07:603,11,0	1/1:1,2:3:9.03:133,9,0	0/0:64,0:26:28.32:0,28,602	0/0:76,0:26:23.06:0,23,445	0/0:25,0:25:65.90:0,66,1570	1/1:7,9:16:30.01:414,30,0	1/1:9,3:12:20.89:250,21,0	0/0:54,0:49:99:0,132,1913	1/1:1,13:14:39.13:622,39,0	0/0:22,0:22:60.20:0,60,1492	0/0:11,0:11:33.11:0,33,871	0/0:18,0:18:45.14:0,45,985	1/1:3,20:23:60.20:944,60,0	1/1:3,16:19:31.21:797,31,0	0/0:32,0:32:84.26:0,84,1056	0/0:20,0:20:60.19:0,60,1438	0/0:13,0:13:31.89:0,32,681	0/1:9,7:16:49.20:301,0,49	0/0:28,0:27:69.23:0,69,1086	0/0:25,0:25:63.18:0,63,786	0/0:28,0:26:45.10:0,45,598	1/1:2,7:9:21.07:319,21,0	1/1:2,7:9:15.01:225,15,0	1/1:5,9:14:10.23:174,10,0	1/1:3,9:12:27.09:436,27,0	0/0:28,0:28:75.25:0,75,1853	0/0:16,0:16:47.97:0,48,561	0/0:9,0:9:24.08:0,24,561
chr10	102936707	.	GTC	G	7277.42	PASS	AB=0.696;AC=35;AF=0.625;AN=56;BaseQRankSum=11.771;DP=672;FS=1.288;HRun=0;HaplotypeScore=202.9599;InbreedingCoeff=0.8931;MQ=56.16;MQ0=16;MQRankSum=-10.446;QD=19.41;ReadPosRankSum=-1.593;VQSLOD=4.6667;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,17:25:13.75:367,14,0	1/1:1,5:6:6.01:61,6,0	0/0:62,0:21:7.82:0,8,105	0/0:81,3:26:14.21:0,14,158	0/0:25,0:25:54.09:0,54,843	1/1:7,8:15:25.69:233,26,0	1/1:5,10:15:8.36:90,8,0	1/1:41,11:47:78.21:931,78,0	1/1:2,16:18:30.22:358,30,0	0/0:21,0:21:54.09:0,54,781	0/0:13,0:13:39.12:0,39,607	0/0:16,0:16:30.10:0,30,486	1/1:1,23:24:63.06:618,63,0	1/1:1,17:19:50.90:500,51,0	1/1:14,18:32:72.23:886,72,0	0/0:21,0:21:57.19:0,57,921	0/0:20,0:20:5.72:0,6,562	0/1:9,7:16:1.58:173,0,2	1/1:20,8:27:36.11:441,36,0	1/1:10,17:27:60.19:737,60,0	1/1:7,22:27:35.99:443,36,0	1/1:5,9:14:26.96:269,27,0	1/1:2,7:9:18.43:171,18,0	1/1:8,9:17:23.75:225,24,0	1/1:0,9:10:26.85:255,27,0	0/0:27,0:27:71.82:0,72,1109	1/1:4,15:19:42.13:517,42,0	0/0:8,0:8:18.06:0,18,293
chr10	102936969	.	T	TG	242.37	PASS	AB=0.745;AC=7;AF=0.125;AN=56;BaseQRankSum=0.311;DP=441;FS=3.295;HRun=11;HaplotypeScore=82.2135;InbreedingCoeff=0.0606;MQ=75.80;MQ0=1;MQRankSum=-0.303;QD=2.79;ReadPosRankSum=-2.812;VQSLOD=-0.5043;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:24:32.84:0,33,225	0/0:5,0:5:2.77:0,3,23	0/0:16,0:17:12.08:0,12,102	0/0:14,0:13:1.34:0,1,24	0/0:13,0:16:14.98:0,15,87	0/0:13,1:14:9.42:0,9,70	0/0:26,1:29:8.43:0,8,219	1/1:13,0:13:0.89:3,1,0	0/0:14,0:16:30.16:0,30,202	0/0:11,0:13:10:0,10,58	0/0:12,0:12:11.92:0,12,93	0/0:17,0:19:18.94:0,19,128	0/0:11,0:13:22.49:0,22,168	0/0:21,0:21:20.81:0,21,162	0/0:8,0:8:11.93:0,12,93	0/0:17,1:18:2.41:0,2,202	0/1:9,16:24:24.70:132,0,25	0/0:23,0:25:47.82:0,48,351	0/1:8,6:14:23.64:120,0,24	0/1:7,0:7:0:0,0,0	0/1:8,3:10:14.17:52,0,14	0/0:12,0:16:15.07:0,15,87	0/0:8,0:8:2.97:0,3,23	0/0:26,0:28:49.81:0,50,377	0/0:11,0:11:15.35:0,15,117	0/0:13,0:14:16.72:0,17,107	0/1:7,10:17:14.23:44,0,14	0/0:10,0:11:22.70:0,23,157
chr10	102938303	.	C	CAG	12474.12	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=15.668;DP=484;FS=40.822;HRun=0;HaplotypeScore=139.7160;InbreedingCoeff=0.9923;MQ=78.43;MQ0=0;MQRankSum=-15.177;QD=43.92;ReadPosRankSum=5.979;VQSLOD=2.4127;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:54.19:1007,54,0	1/1:2,5:7:21.07:372,21,0	0/0:15,0:15:39.13:0,39,565	0/0:21,0:21:60.04:0,60,770	0/0:17,0:17:45.15:0,45,661	1/1:1,8:9:24.08:449,24,0	1/1:2,15:17:45.15:841,45,0	1/1:3,17:20:47.95:865,48,0	1/1:0,12:12:36.12:672,36,0	0/0:26,0:26:72.21:0,72,1001	0/0:12,0:12:30.10:0,30,442	0/0:32,0:32:90.28:0,90,1287	1/1:6,19:25:63.17:1134,63,0	1/1:0,15:15:42.14:784,42,0	1/1:2,11:13:36.12:672,36,0	0/0:26,0:26:72.24:0,72,1057	1/1:2,5:7:15.05:280,15,0	1/1:1,12:13:36.12:673,36,0	1/1:3,9:12:24.08:449,24,0	1/1:6,8:14:21.03:356,21,0	1/1:1,14:15:39.13:729,39,0	1/1:3,9:12:21.07:392,21,0	1/1:5,6:11:15.05:280,15,0	1/1:1,17:18:32.78:616,33,0	1/1:4,18:22:57.20:1064,57,0	0/0:36,0:36:99:0,108,1573	1/1:2,18:20:45.15:840,45,0	0/0:15,0:15:45.15:0,45,662
chr10	102938368	.	C	CGCCTCATAACCCAGCG	18979.17	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=6.273;DP=383;FS=14.689;HRun=0;HaplotypeScore=193.0699;InbreedingCoeff=0.9279;MQ=91.11;MQ0=0;MQRankSum=-14.378;QD=113.65;ReadPosRankSum=-3.157;VQSLOD=3.1433;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,5:17:33.11:2148,33,0	1/1:5,2:7:15.01:847,15,0	0/0:19,0:19:14.12:0,14,1379	0/0:21,0:21:27.61:0,28,1461	0/0:19,0:19:51.17:0,51,2281	1/1:3,1:4:6.02:352,6,0	1/1:2,1:4:12.04:833,12,0	1/1:13,0:13:26.96:820,27,0	1/1:4,1:5:12.04:629,12,0	0/0:35,0:35:99:0,102,4450	0/0:21,0:21:60.63:0,61,2586	0/0:36,0:36:99:0,102,4631	1/1:7,3:10:24.08:1229,24,0	1/1:4,4:8:21.07:1362,21,0	1/1:6,0:6:15.05:785,15,0	0/0:32,0:32:84.27:0,84,3552	1/1:4,2:6:15.05:756,15,0	1/1:6,1:7:15.05:1077,15,0	1/1:8,1:9:27.09:1331,27,0	1/1:12,4:16:39.13:1900,39,0	1/1:5,0:5:6.02:139,6,0	1/1:4,1:5:12.04:358,12,0	1/1:6,2:8:15.01:544,15,0	1/1:4,2:6:8.99:492,9,0	1/1:14,4:19:36.04:1579,36,0	0/0:21,0:21:60.12:0,60,2289	1/1:4,8:12:24.08:1796,24,0	0/0:12,0:12:30.10:0,30,1266
chr10	102938433	.	GTTGGCTTACA	G	4590.56	PASS	AB=0.600;AC=33;AF=0.635;AN=52;BaseQRankSum=10.584;DP=262;FS=18.754;HRun=0;HaplotypeScore=106.0188;InbreedingCoeff=0.7132;MQ=91.11;MQ0=1;MQRankSum=-10.270;QD=83.46;ReadPosRankSum=2.726;VQSLOD=3.4634;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:3.01:102,3,0	1/1:0,3:3:6.02:203,6,0	0/0:19,0:17:51.17:0,51,2027	0/0:28,0:24:72.18:0,72,3046	0/0:14,0:14:42.14:0,42,2136	./.	1/1:0,3:3:9.03:262,9,0	./.	1/1:0,5:5:12.04:406,12,0	0/0:32,0:32:96.31:0,96,4687	0/0:10,0:10:30.09:0,30,1492	0/0:39,0:39:99:0,117,6134	1/1:1,2:3:9.03:304,9,0	1/1:0,4:4:12.04:403,12,0	1/1:0,6:6:12.04:405,12,0	0/0:22,0:22:66.23:0,66,3597	1/1:0,1:1:3.01:102,3,0	1/1:0,2:2:6.02:204,6,0	0/1:1,2:3:99:192,0,143	1/1:0,4:4:12.04:357,12,0	1/1:0,4:4:9.03:307,9,0	1/1:0,1:1:3.01:103,3,0	1/1:0,4:4:9.03:302,9,0	1/1:0,1:1:3.01:101,3,0	1/1:0,8:8:21.07:635,21,0	0/0:29,0:29:87.28:0,87,4560	1/1:0,2:2:6.02:203,6,0	0/0:13,0:13:39.13:0,39,2144
chr10	102938491	.	AC	A	4775.44	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=12.917;DP=306;FS=6.554;HRun=1;HaplotypeScore=82.9478;InbreedingCoeff=0.9308;MQ=66.74;MQ0=0;MQRankSum=-11.667;QD=27.29;ReadPosRankSum=3.361;VQSLOD=4.5041;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:45.13:518,45,0	1/1:0,5:5:15.04:170,15,0	0/0:9,0:9:24.08:0,24,352	0/0:10,0:9:26.02:0,26,330	0/0:13,0:13:39.13:0,39,623	1/1:0,3:3:6.01:63,6,0	1/1:0,13:13:33.09:375,33,0	1/1:0,9:9:21.06:247,21,0	1/1:3,7:10:22.83:231,23,0	0/0:20,0:20:60.15:0,60,879	0/0:8,0:8:24.05:0,24,356	0/0:26,0:26:75.22:0,75,1151	1/1:1,10:11:27.54:306,28,0	1/1:1,11:12:33.56:380,34,0	1/1:1,5:6:9.02:99,9,0	0/0:14,0:14:39.12:0,39,601	1/1:0,4:4:9.02:100,9,0	1/1:0,8:8:24.07:264,24,0	1/1:2,3:5:9.50:110,9,0	1/1:3,5:8:18.04:198,18,0	1/1:0,22:22:47.95:539,48,0	1/1:1,10:11:26.43:272,26,0	1/1:1,8:9:15.04:168,15,0	1/1:0,2:2:6.02:67,6,0	1/1:0,15:15:42.12:497,42,0	0/0:21,0:21:63.21:0,63,987	1/1:0,5:5:15.04:172,15,0	0/0:10,0:10:27.09:0,27,417
chr10	102938567	.	TC	T	936.66	PASS	AB=0.520;AC=23;AF=0.548;AN=42;BaseQRankSum=7.191;DP=242;FS=7.775;HRun=3;HaplotypeScore=56.6580;InbreedingCoeff=0.7728;MQ=94.29;MQ0=5;MQRankSum=-7.505;QD=14.19;ReadPosRankSum=0.279;VQSLOD=2.0421;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,10:12:18.06:233,18,0	1/1:0,3:2:2.93:38,3,0	0/0:25,0:24:32.63:0,33,699	0/0:33,0:31:76.14:0,76,1027	0/0:11,0:11:33.11:0,33,517	1/1:0,2:2:3.01:39,3,0	1/1:3,3:7:12.01:134,12,0	1/1:1,2:3:6.02:78,6,0	./.	0/0:16,0:16:48.16:0,48,726	0/0:9,0:9:27.09:0,27,419	0/0:28,0:28:84.27:0,84,1304	./.	1/1:0,2:2:3.01:36,3,0	./.	0/0:12,0:12:36.12:0,36,556	1/1:0,1:1:3.01:39,3,0	1/1:0,4:5:12.04:156,12,0	./.	1/1:0,3:3:6.02:77,6,0	0/1:1,12:12:0.01:0,0,0	1/1:0,7:6:12.04:155,12,0	./.	./.	1/1:0,7:7:9.03:117,9,0	0/0:17,0:17:51.17:0,51,813	./.	0/0:11,0:11:33.09:0,33,493
chr10	102938576	.	CT	C	463.44	PASS	AB=1.000;AC=20;AF=0.455;AN=44;BaseQRankSum=6.237;DP=237;FS=3.161;HRun=1;HaplotypeScore=59.3916;InbreedingCoeff=0.6089;MQ=94.63;MQ0=1;MQRankSum=-5.737;QD=8.74;ReadPosRankSum=-0.341;VQSLOD=0.8353;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,6:10:10.95:145,11,0	1/1:0,2:2:2.93:37,3,0	0/0:28,2:27:56.12:0,56,1062	0/0:33,0:31:82.46:0,82,1144	0/0:12,0:12:36.10:0,36,526	1/1:1,1:2:2.96:19,3,0	1/1:0,4:4:9.03:112,9,0	0/1:2,0:2:9.50:10,0,17	./.	0/0:17,0:17:48.16:0,48,744	0/0:8,0:8:24.07:0,24,355	0/0:28,0:28:84.27:0,84,1302	./.	1/1:1,1:2:2.92:17,3,0	./.	0/0:11,0:11:33.11:0,33,527	0/0:4,0:4:11.85:0,12,79	1/1:1,2:3:6.02:78,6,0	./.	0/0:3,0:3:2.97:0,3,21	1/1:12,0:12:0.46:1,0,0	1/1:3,3:6:11.76:112,12,0	./.	./.	1/1:1,6:7:6.02:76,6,0	0/0:16,0:16:48.16:0,48,755	0/1:3,0:3:9.43:14,0,9	0/0:14,0:14:36.12:0,36,563
chr10	102938598	.	CCCA	C	1107.84	PASS	AC=32;AF=0.615;AN=52;BaseQRankSum=7.608;DP=241;FS=3.531;HRun=0;HaplotypeScore=60.2032;InbreedingCoeff=0.6812;MQ=85.61;MQ0=1;MQRankSum=-7.442;QD=13.35;ReadPosRankSum=-2.360;VQSLOD=2.8289;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,2:8:2.95:19,3,0	1/1:0,2:2:6.02:95,6,0	0/0:25,0:24:42.24:0,42,1155	0/0:30,0:29:76.12:0,76,1651	0/0:7,0:7:18.06:0,18,419	./.	1/1:2,3:5:5.96:70,6,0	1/1:0,5:5:14.96:167,15,0	1/1:3,1:4:2.98:21,3,0	0/0:9,0:9:27.09:0,27,628	0/0:5,0:5:15.05:0,15,349	0/0:29,0:29:84.28:0,84,1864	1/1:2,0:2:2.97:20,3,0	1/1:0,4:4:3.01:51,3,0	0/0:2,0:2:0.94:0,1,2	0/0:12,0:12:33.11:0,33,769	1/1:2,3:5:12:164,12,0	1/1:2,3:5:11.19:175,11,0	1/1:1,2:3:3.01:51,3,0	1/1:2,0:2:3:26,3,0	1/1:4,11:14:2.90:51,3,0	./.	1/1:0,4:4:2.97:20,3,0	1/1:1,3:4:2.96:19,3,0	1/1:3,3:6:14.96:192,15,0	0/0:13,0:13:39.13:0,39,870	1/1:1,8:9:9.03:151,9,0	0/0:20,0:20:57.10:0,57,1094
chr10	102938600	.	CA	C	429.68	PASS	AC=32;AF=0.615;AN=52;BaseQRankSum=8.196;DP=229;FS=3.495;HRun=1;HaplotypeScore=48.6176;InbreedingCoeff=0.6871;MQ=82.51;MQ0=1;MQRankSum=-7.493;QD=5.44;ReadPosRankSum=-2.816;VQSLOD=-0.5254;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,2:8:2.96:19,3,0	1/1:2,0:2:5.88:43,6,0	0/0:22,0:21:40.26:0,40,749	0/0:28,0:27:75.20:0,75,1072	0/0:7,0:7:18.06:0,18,269	./.	1/1:3,1:4:5.80:33,6,0	1/1:5,0:5:14.54:92,15,0	1/1:1,2:3:2.98:21,3,0	0/0:9,0:9:27.09:0,27,403	0/0:6,0:6:18.05:0,18,250	0/0:28,0:28:81.18:0,81,1164	1/1:3,0:3:5.96:44,6,0	1/1:4,0:4:2.80:13,3,0	0/0:2,0:2:0.94:0,1,2	0/0:11,0:11:33.11:0,33,494	1/1:4,0:5:11.29:58,11,0	1/1:5,0:5:11.23:80,11,0	1/1:5,0:5:2.84:14,3,0	1/1:1,0:1:3:26,3,0	1/1:11,1:11:2.05:13,2,0	./.	1/1:4,0:4:2.97:20,3,0	1/1:3,0:3:2.96:19,3,0	1/1:5,1:6:14.33:79,14,0	0/0:13,0:13:39.12:0,39,562	1/1:8,1:9:8.35:39,8,0	0/0:19,0:19:51.06:0,51,670
chr10	102938726	.	G	GA	4749	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=13.581;DP=326;FS=96.860;HRun=1;HaplotypeScore=85.2130;InbreedingCoeff=0.9001;MQ=89.36;MQ0=0;MQRankSum=-13.268;QD=27.77;ReadPosRankSum=-2.059;VQSLOD=-0.0168;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:32.96:437,33,0	1/1:0,1:1:3.01:45,3,0	0/0:22,0:22:59.33:0,59,763	0/0:11,0:11:29.96:0,30,327	0/0:14,0:14:42.11:0,42,527	1/1:0,6:6:12.04:178,12,0	1/1:5,15:20:35.87:431,36,0	1/1:4,16:20:42.06:579,42,0	1/1:3,5:8:18.02:243,18,0	0/0:27,0:27:80.92:0,81,1000	0/0:16,0:16:48.16:0,48,621	0/0:26,0:26:78.24:0,78,994	1/1:0,8:8:18.06:268,18,0	1/1:2,12:14:33.11:491,33,0	1/1:2,10:12:21:286,21,0	0/0:13,0:13:36.10:0,36,452	1/1:4,9:13:23.95:298,24,0	1/1:0,8:8:14.98:197,15,0	1/1:1,3:4:8.99:109,9,0	1/1:1,5:6:18.02:243,18,0	1/1:0,4:4:6.02:89,6,0	1/1:0,10:10:27.06:376,27,0	1/1:0,3:3:8.99:108,9,0	1/1:2,4:6:6.02:88,6,0	1/1:1,4:5:14.96:174,15,0	0/0:14,0:14:39.13:0,39,506	1/1:1,3:4:8.63:108,9,0	0/0:12,0:12:30.10:0,30,389
chr10	102938761	.	G	GCCA	10005.60	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=9.946;DP=385;FS=90.778;HRun=0;HaplotypeScore=92.0448;InbreedingCoeff=0.9389;MQ=79.65;MQ0=0;MQRankSum=-14.237;QD=43.13;ReadPosRankSum=1.056;VQSLOD=1.6742;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:18:21.07:481,21,0	1/1:0,1:1:3.01:69,3,0	0/0:19,0:19:51.15:0,51,807	0/0:19,0:19:57.19:0,57,953	0/0:13,0:13:39.12:0,39,629	1/1:2,4:6:15.04:297,15,0	1/1:4,26:30:54.19:1239,54,0	1/1:7,23:31:63.12:1250,63,0	1/1:0,8:8:24.08:551,24,0	0/0:22,0:22:66.22:0,66,1105	0/0:13,0:13:36.12:0,36,609	0/0:21,0:21:63.19:0,63,1034	1/1:1,7:8:21.07:481,21,0	1/1:3,8:12:24.08:520,24,0	1/1:2,11:14:33.10:713,33,0	0/0:17,0:17:51.16:0,51,842	1/1:3,14:18:39.13:895,39,0	1/1:1,11:13:27.09:621,27,0	1/1:3,7:12:27.07:554,27,0	1/1:0,6:8:15.05:343,15,0	1/1:2,7:10:12.03:231,12,0	1/1:2,9:11:27.09:616,27,0	1/1:1,3:5:6.02:138,6,0	1/1:2,9:11:18.06:412,18,0	1/1:2,6:8:15:294,15,0	0/0:20,0:20:53.54:0,54,851	1/1:3,4:8:14.87:300,15,0	0/0:9,0:9:27.09:0,27,460
chr10	102939109	.	CGAGTGTGGATTAGGCTCTTACT	C	25046.85	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=16.321;DP=564;FS=9.760;HRun=0;HaplotypeScore=395.4988;InbreedingCoeff=0.9225;MQ=89.65;MQ0=0;MQRankSum=-15.462;QD=78.03;ReadPosRankSum=6.290;VQSLOD=2.7240;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,14:27:42.14:2410,42,0	1/1:1,3:4:12.02:570,12,0	0/0:29,0:29:84.29:0,84,5738	0/0:26,0:26:69.23:0,69,4936	0/0:17,0:17:51.18:0,51,5099	1/1:5,5:10:15.05:919,15,0	1/1:10,7:17:21.07:1285,21,0	1/1:17,0:17:3:28,3,0	1/1:8,9:17:27.09:1580,27,0	0/0:33,0:33:99:0,99,9429	0/0:18,0:18:54.19:0,54,5332	0/0:52,0:52:99:0,154,14364	1/1:10,12:22:36.12:2205,36,0	1/1:10,11:21:36.11:2011,36,0	1/1:8,19:27:51.18:3115,51,0	0/0:35,0:35:93.32:0,93,8884	1/1:13,9:22:21.02:1286,21,0	1/1:4,7:11:21.07:1286,21,0	1/1:10,2:12:6.01:208,6,0	1/1:5,7:12:6.02:368,6,0	1/1:16,11:27:15.03:727,15,0	1/1:5,11:16:30.09:1678,30,0	1/1:2,6:8:18.04:943,18,0	1/1:9,7:16:20.38:1282,20,0	1/1:10,7:17:24.06:1310,24,0	0/0:29,0:29:87.30:0,87,8344	1/1:6,12:18:29.87:1837,30,0	0/0:4,0:4:12.04:0,12,1057
chr10	102939143	.	CG	C	6705.26	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=16.382;DP=607;FS=2.765;HRun=4;HaplotypeScore=261.4770;InbreedingCoeff=0.9889;MQ=83.30;MQ0=0;MQRankSum=-16.358;QD=31.93;ReadPosRankSum=5.051;VQSLOD=2.5460;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:72.22:860,72,0	1/1:0,5:5:15.05:179,15,0	0/0:30,0:30:84.27:0,84,1141	0/0:26,0:26:66.18:0,66,892	0/0:25,0:25:66.22:0,66,922	1/1:0,14:14:42.13:500,42,0	1/1:0,26:26:72.22:860,72,0	0/0:26,0:26:75.24:0,75,1032	1/1:0,19:19:48.62:574,49,0	0/0:37,0:37:99:0,111,1523	0/0:24,0:24:66.20:0,66,890	0/0:35,0:35:99:0,102,1377	1/1:1,16:17:48.15:573,48,0	1/1:0,20:20:58.73:685,59,0	0/0:29,0:29:84.28:0,84,1169	0/0:33,0:33:90.30:0,90,1257	0/0:21,0:21:54.18:0,54,752	1/1:1,21:22:63.19:753,63,0	0/0:12,0:12:36.12:0,36,502	0/0:11,0:11:27.09:0,27,376	0/0:30,0:30:57.12:0,57,745	1/1:0,19:19:45.14:538,45,0	1/1:0,10:10:21.06:250,21,0	1/1:0,15:15:42.13:501,42,0	1/1:0,13:13:36.11:430,36,0	0/0:33,0:33:99:0,99,1376	0/0:22,0:22:60.11:0,60,836	0/0:3,0:3:9.03:0,9,126
chr10	102939176	.	GCT	G	8928	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=17.387;DP=635;FS=12.849;HRun=0;HaplotypeScore=238.9522;InbreedingCoeff=0.9933;MQ=63.61;MQ0=0;MQRankSum=-17.254;QD=36.89;ReadPosRankSum=1.575;VQSLOD=3.0170;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:32:75.25:1092,75,0	1/1:2,7:9:18.06:265,18,0	0/0:13,0:13:33.58:0,34,574	0/0:13,0:13:36.05:0,36,540	0/0:19,0:19:57.20:0,57,1065	1/1:1,16:17:48.16:706,48,0	1/1:3,31:34:90.30:1323,90,0	0/0:25,0:25:75.26:0,75,1390	1/1:3,18:21:51.17:750,51,0	0/0:30,0:30:90.31:0,90,1674	0/0:21,0:21:54.17:0,54,974	0/0:35,0:35:99:0,105,1919	1/1:1,22:23:66.22:961,66,0	1/1:2,18:20:54.18:794,54,0	0/0:37,0:37:99:0,105,1964	0/0:31,0:31:93.32:0,93,1742	0/0:28,0:28:75.21:0,75,1356	1/1:2,17:19:48.16:706,48,0	0/0:12,0:12:30.10:0,30,561	0/0:21,0:21:57.20:0,57,1066	0/0:43,0:43:96.33:0,96,1787	1/1:2,24:26:63.21:925,63,0	1/1:5,6:11:18.05:243,18,0	1/1:1,17:18:48.16:704,48,0	1/1:0,12:12:33.10:459,33,0	0/0:33,0:33:90.31:0,90,1672	0/0:28,0:28:84.29:0,84,1571	0/0:4,0:4:12.04:0,12,224
chr10	102939185	.	G	GC	8603.11	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=17.781;DP=650;FS=14.555;HRun=3;HaplotypeScore=210.8966;InbreedingCoeff=0.9959;MQ=69.43;MQ0=0;MQRankSum=-17.033;QD=33.48;ReadPosRankSum=-0.733;VQSLOD=1.4329;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:30:66.18:897,66,0	1/1:0,8:8:21.07:293,21,0	0/0:15,0:15:30.04:0,30,328	0/0:13,0:13:33.07:0,33,372	0/0:19,0:19:54.16:0,54,647	1/1:0,20:20:54.18:748,54,0	1/1:4,30:34:87.25:1194,87,0	0/0:20,0:20:60.18:0,60,719	1/1:0,23:23:60.20:838,60,0	0/0:30,0:30:87.27:0,87,1043	0/0:17,0:17:45.14:0,45,540	0/0:37,0:37:99:0,102,1223	1/1:2,26:29:75.20:1011,75,0	1/1:2,18:20:54.14:732,54,0	0/0:38,0:38:99:0,105,1256	0/0:32,0:32:96.28:0,96,1141	0/0:31,0:31:84.26:0,84,1007	1/1:1,19:20:48.16:670,48,0	0/0:12,0:12:33.10:0,33,395	0/0:21,0:21:57.17:0,57,680	0/0:45,0:45:99:0,105,1256	1/1:3,23:27:63.21:866,63,0	1/1:2,9:11:18.06:251,18,0	1/1:1,18:19:42.10:564,42,0	1/1:2,14:16:39.13:538,39,0	0/0:31,0:31:90.27:0,90,1068	0/0:27,0:27:81.25:0,81,972	0/0:5,0:5:15.05:0,15,180
chr10	102939643	.	A	AAGGG	17355.39	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=3.909;DP=675;FS=10.369;HRun=0;HaplotypeScore=124.6010;InbreedingCoeff=0.9881;MQ=73.64;MQ0=0;MQRankSum=-5.133;QD=35.49;ReadPosRankSum=4.436;VQSLOD=4.7338;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:54.12:641,54,0	1/1:5,0:5:12.04:146,12,0	0/0:17,0:16:34.43:0,34,547	0/0:14,0:14:13.22:0,13,442	0/0:13,0:13:33.09:0,33,574	1/1:17,0:17:39.12:475,39,0	1/1:35,0:35:78.24:953,78,0	1/1:6,16:25:63.07:1127,63,0	1/1:27,0:27:72.23:880,72,0	0/0:31,0:31:84.21:0,84,1254	0/0:11,0:11:30.06:0,30,420	0/0:32,0:32:93.29:0,93,1659	1/1:33,0:33:84.19:1005,84,0	1/1:31,0:31:80.73:960,81,0	1/1:3,34:37:90.31:2185,90,0	0/0:35,0:35:99:0,102,1842	1/1:5,37:43:88.13:2154,88,0	1/1:26,0:26:60.19:734,60,0	1/1:4,19:24:60.15:1266,60,0	1/1:3,11:15:30.10:702,30,0	1/1:6,41:47:69.22:1731,69,0	1/1:22,0:22:32.99:400,33,0	1/1:20,0:20:45.13:538,45,0	1/1:25,0:25:38.72:475,39,0	1/1:16,0:16:39.08:457,39,0	0/0:27,0:27:78.18:0,78,1230	1/1:2,11:13:21.52:526,22,0	0/0:6,0:6:15.05:0,15,267
chr10	102939645	.	G	GGGA	18996.08	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-2.428;DP=670;FS=10.074;HRun=0;HaplotypeScore=104.9042;InbreedingCoeff=0.9196;MQ=72.86;MQ0=0;MQRankSum=-4.514;QD=39.09;ReadPosRankSum=5.675;VQSLOD=5.5846;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:33:57.13:1171,57,0	1/1:0,5:5:12.04:256,12,0	0/0:15,0:14:38.45:0,38,520	0/0:15,0:15:25.96:0,26,409	0/0:13,0:13:33.09:0,33,528	1/1:1,17:19:42.14:882,42,0	1/1:5,30:36:84.28:1756,84,0	1/1:25,2:27:30.19:681,30,0	1/1:3,27:31:78.27:1627,78,0	0/0:31,0:31:93.21:0,93,1252	0/0:11,0:11:33.04:0,33,409	0/0:33,0:33:93.29:0,93,1532	1/1:4,28:32:84.27:1743,84,0	1/1:6,27:33:84.10:1737,84,0	1/1:34,0:34:89.08:1181,89,0	0/0:34,0:34:99:0,102,1688	1/1:39,0:39:88.17:1214,88,0	1/1:1,25:29:60.20:1283,60,0	1/1:20,0:20:39.64:630,40,0	1/1:16,0:16:30.02:357,30,0	1/1:42,0:42:69.20:950,69,0	1/1:1,18:21:33.05:701,33,0	1/1:0,16:18:45.15:950,45,0	1/1:0,23:23:38.63:805,39,0	1/1:0,14:15:39.13:814,39,0	0/0:27,0:27:81.19:0,81,1216	0/1:13,0:13:10.13:259,0,10	0/0:5,0:5:15.05:0,15,255
chr10	102939647	.	G	GA	3977.72	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=15.017;DP=660;FS=8.688;HRun=0;HaplotypeScore=130.1381;InbreedingCoeff=0.6930;MQ=74.08;MQ0=0;MQRankSum=-6.087;QD=8.48;ReadPosRankSum=9.372;VQSLOD=2.3272;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:32.32:234,32,0	1/1:5,0:5:11.19:53,11,0	0/0:16,0:15:39.06:0,39,470	0/0:16,0:16:41.79:0,42,438	0/0:13,0:13:36.09:0,36,462	1/1:19,0:19:36.79:174,37,0	1/1:32,0:32:35.34:305,35,0	0/1:28,0:28:99:167,0,143	1/1:30,0:30:66.99:322,67,0	0/0:33,0:33:96.22:0,96,1129	0/0:11,0:11:32.59:0,33,342	0/0:33,0:33:96.28:0,96,1290	1/1:30,2:32:55.49:350,55,0	1/1:29,2:31:48.68:327,49,0	1/1:34,0:34:46.65:313,47,0	0/0:34,0:34:99:0,102,1392	1/1:36,0:37:40.90:311,41,0	1/1:28,0:28:34.34:244,34,0	0/1:21,0:21:47.44:148,0,47	0/1:15,0:15:25.71:56,0,26	1/1:42,0:42:19.47:229,19,0	1/1:18,0:18:30.61:143,31,0	1/1:17,0:17:40.06:189,40,0	1/1:22,0:22:36.57:196,37,0	1/1:15,0:15:31.61:156,32,0	0/0:29,0:29:81.17:0,81,1014	0/1:12,0:12:19.80:60,0,20	0/0:6,0:6:15.05:0,15,209
chr10	102940319	.	C	CT	4439.81	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-12.261;DP=670;FS=2.547;HRun=8;HaplotypeScore=68.3100;InbreedingCoeff=0.9864;MQ=76.98;MQ0=0;MQRankSum=-1.339;QD=28.64;ReadPosRankSum=-3.658;VQSLOD=3.8556;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:93.51:0,94,852	0/0:11,0:11:30.02:0,30,275	0/0:23,0:22:20.98:0,21,298	0/0:14,0:13:18.34:0,18,187	0/0:29,0:29:75.03:0,75,686	0/0:21,0:21:57.02:0,57,522	0/0:19,0:19:57.03:0,57,522	1/1:2,34:36:99:1099,99,0	0/0:33,0:33:96.03:0,96,873	0/0:33,0:33:81.01:0,81,732	0/0:21,0:21:57.01:0,57,515	0/0:25,0:25:63.01:0,63,572	0/0:23,0:23:60.02:0,60,549	0/0:19,0:20:44.05:0,44,390	1/1:3,25:28:69.21:796,69,0	0/0:22,0:22:63.03:0,63,576	0/0:24,0:24:66.04:0,66,604	0/0:20,0:20:54.03:0,54,494	1/1:5,11:16:9.43:354,9,0	1/1:2,26:28:75.17:840,75,0	1/1:1,11:12:27.08:312,27,0	0/0:17,0:17:48.03:0,48,439	0/0:22,0:23:59.06:0,59,527	0/0:26,0:26:72.02:0,72,653	0/0:29,0:29:78.03:0,78,714	0/0:26,0:26:66.02:0,66,600	1/1:1,34:34:90.27:1038,90,0	0/0:19,0:19:45.68:0,46,459
chr10	102941244	.	CCT	C	74.94	PASS	AB=0.949;AC=6;AF=0.107;AN=56;BaseQRankSum=1.503;DP=790;FS=0.000;HRun=0;HaplotypeScore=206.7966;InbreedingCoeff=-0.0168;MQ=67.83;MQ0=12;MQRankSum=-0.984;QD=0.45;ReadPosRankSum=-0.045;VQSLOD=2.5749;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:11.45:0,11,118	0/0:17,0:17:17.88:0,18,150	0/0:40,0:25:3.48:0,3,35	0/1:62,1:34:20.56:21,0,92	0/0:17,0:17:33.02:0,33,422	0/0:35,0:34:11.87:0,12,108	0/0:26,0:23:6.05:0,6,46	0/0:55,0:55:49.69:0,50,431	0/0:29,0:28:21.95:0,22,169	0/1:29,3:33:37.55:38,0,736	0/0:13,0:13:27.09:0,27,419	0/0:28,0:28:48.15:0,48,694	0/0:33,0:33:24.72:0,25,225	0/0:24,0:23:20.85:0,21,173	0/0:28,0:27:20.82:0,21,147	0/0:36,0:36:28.43:0,28,827	0/0:22,0:22:21.12:0,21,148	0/0:17,0:17:29.26:0,29,279	0/0:29,0:28:22.25:0,22,204	0/0:20,0:20:2.98:0,3,22	0/0:24,0:21:4.39:0,4,40	0/0:18,0:18:3.93:0,4,45	0/0:23,0:22:0.53:0,1,21	0/0:33,0:32:4.35:0,4,29	1/1:18,0:18:1.17:2,1,0	0/1:30,4:33:99:112,0,596	0/0:23,0:23:16.83:0,17,121	0/1:18,0:18:7.49:7,0,339
chr10	102941273	.	TTC	T	4171.54	PASS	AB=0.909;AC=23;AF=0.411;AN=56;BaseQRankSum=7.343;DP=754;FS=74.694;HRun=0;HaplotypeScore=210.2214;InbreedingCoeff=0.0400;MQ=51.78;MQ0=11;MQRankSum=-1.400;QD=8.34;ReadPosRankSum=-6.653;VQSLOD=0.0536;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,1:35:67.12:102,0,67	0/1:18,1:19:72.08:152,0,72	0/1:24,0:10:7.35:7,0,170	0/1:45,1:26:6.89:7,0,464	0/0:20,0:20:54.17:0,54,821	0/1:27,2:29:71.07:227,0,71	0/1:30,3:29:5.73:324,0,6	0/1:19,22:41:27.48:666,0,27	0/1:26,6:31:25.06:407,0,25	0/0:37,0:37:87.15:0,87,1354	0/0:11,0:11:27.05:0,27,441	0/0:27,0:27:66.15:0,66,996	0/1:25,1:26:40.26:139,0,40	0/1:24,3:26:50.21:267,0,50	0/0:36,0:36:5.14:0,5,90	0/0:33,1:34:13.10:0,13,1195	0/1:16,2:19:64.10:221,0,64	0/1:15,4:20:4.88:260,0,5	0/1:22,0:22:47.79:154,0,48	0/0:20,1:21:13.93:0,14,66	1/1:25,0:23:27.36:255,27,0	1/1:16,3:19:24.80:273,25,0	1/1:25,0:25:2.19:233,2,0	1/1:27,5:31:20.25:253,20,0	1/1:22,1:23:21.74:226,22,0	0/0:30,0:29:64.13:0,64,1054	0/0:24,0:24:9.59:0,10,66	0/0:13,0:12:21.07:0,21,313
chr10	102941275	.	C	CTCTCTCTT	8002.54	PASS	AB=0.821;AC=35;AF=0.625;AN=56;BaseQRankSum=12.953;DP=771;FS=12.888;HRun=0;HaplotypeScore=267.2339;InbreedingCoeff=0.6035;MQ=51.25;MQ0=9;MQRankSum=-5.643;QD=14.58;ReadPosRankSum=-8.180;VQSLOD=0.9689;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,5:35:44.72:508,45,0	1/1:16,0:19:5.14:339,5,0	0/1:26,0:11:5.40:5,0,197	0/0:45,0:26:2.96:0,3,609	0/0:21,0:21:55.52:0,56,1180	1/1:28,2:29:55.40:572,55,0	1/1:31,1:28:59.83:430,60,0	0/1:39,0:39:9.98:467,0,10	1/1:31,2:34:63.67:641,64,0	0/0:39,0:39:99:0,105,2298	0/0:11,0:11:26.12:0,26,722	0/0:27,0:27:75.14:0,75,1500	1/1:22,3:26:38.81:654,39,0	1/1:21,5:26:54.27:539,54,0	0/1:15,0:44:96.56:193,0,97	0/0:35,0:35:83.90:0,84,2072	0/1:17,0:19:52.66:461,0,53	1/1:17,2:20:26.42:685,26,0	0/1:8,14:24:5.78:830,0,6	1/1:8,13:22:12.94:253,13,0	1/1:24,1:24:30.94:347,31,0	1/1:20,0:20:21.73:192,22,0	1/1:24,2:25:35.49:266,35,0	1/1:27,2:30:32.78:270,33,0	1/1:21,2:23:39.20:232,39,0	0/0:31,0:30:84.26:0,84,1894	1/1:10,0:24:10.11:122,10,0	0/0:13,0:12:24.03:0,24,534
chr10	102941299	.	T	TAC	8209.33	PASS	AB=0.589;AC=23;AF=0.411;AN=56;BaseQRankSum=6.281;DP=747;FS=6.890;HRun=0;HaplotypeScore=190.8695;InbreedingCoeff=0.9024;MQ=56.33;MQ0=4;MQRankSum=-0.615;QD=26.57;ReadPosRankSum=3.225;VQSLOD=5.6717;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,22:33:9.32:364,0,9	1/1:3,10:13:24.08:391,24,0	0/0:43,0:23:40.56:0,41,418	0/0:38,0:29:45.25:0,45,451	0/0:26,0:26:68.99:0,69,812	1/1:11,17:27:48.21:783,48,0	1/1:7,21:24:45.15:735,45,0	0/0:34,0:34:66.18:0,66,781	1/1:7,26:32:61.92:1071,62,0	0/0:40,0:40:91.80:0,92,1086	0/0:12,0:12:21.06:0,21,247	0/0:32,0:32:83.84:0,84,994	1/1:12,9:21:37.80:519,38,0	1/1:9,17:26:36.82:810,37,0	0/0:36,0:35:21.05:0,21,242	0/0:35,1:38:97.75:0,98,1116	0/0:6,0:15:15.86:0,16,78	1/1:6,16:24:39.13:616,39,0	0/0:15,0:14:11.91:0,12,311	0/0:19,0:19:24.08:0,24,294	0/0:27,0:27:54.17:0,54,664	1/1:6,19:25:44.71:733,45,0	1/1:7,16:22:4.81:599,5,0	1/1:12,19:30:50.72:805,51,0	1/1:7,16:23:47.96:783,48,0	0/0:31,0:32:54.09:0,54,896	0/0:20,0:20:11.81:0,12,135	0/0:10,0:10:21.07:0,21,258
chr10	102943223	.	CAA	C	11442.11	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=8.227;DP=668;FS=7.672;HRun=12;HaplotypeScore=87.6971;InbreedingCoeff=0.9795;MQ=71.11;MQ0=2;MQRankSum=-0.299;QD=23.16;ReadPosRankSum=3.520;VQSLOD=4.4486;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,46:56:99:1354,135,0	1/1:1,4:5:11.98:111,12,0	0/0:15,0:15:8.43:0,8,268	0/0:16,0:12:15.04:0,15,188	0/0:18,0:19:47.65:0,48,668	1/1:1,25:26:69.15:702,69,0	1/1:6,15:22:15.41:394,15,0	1/1:2,26:29:80.90:799,81,0	1/1:2,16:18:36.07:366,36,0	0/0:23,0:23:63.21:0,63,933	0/0:8,0:10:24.07:0,24,325	0/0:31,0:33:81.26:0,81,1170	1/1:3,26:29:71.64:711,72,0	1/1:6,18:24:51.06:518,51,0	1/1:3,18:22:44.83:510,45,0	0/0:17,0:17:51.17:0,51,761	1/1:3,24:26:57.11:580,57,0	1/1:2,24:26:57.10:580,57,0	1/1:2,12:15:38.80:371,39,0	1/1:4,19:23:47.59:487,48,0	1/1:4,25:29:66.13:671,66,0	1/1:1,25:26:72.13:732,72,0	1/1:4,13:18:26.79:327,27,0	1/1:7,48:55:99:1201,103,0	1/1:2,19:21:51.09:518,51,0	0/0:27,0:27:72.23:0,72,1047	1/1:1,21:22:44.83:510,45,0	0/0:12,0:12:33.11:0,33,491
chr10	102943788	.	TG	T	6613.13	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=8.744;DP=496;FS=13.798;HRun=2;HaplotypeScore=183.5781;InbreedingCoeff=0.9680;MQ=55.43;MQ0=3;MQRankSum=-8.682;QD=18.07;ReadPosRankSum=4.454;VQSLOD=3.2480;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,2:32:90.44:695,90,0	1/1:8,0:8:23.87:183,24,0	0/0:31,0:11:23.57:0,24,191	0/0:17,0:10:15.78:0,16,127	0/0:15,0:15:17.55:0,18,169	1/1:14,0:14:38.71:292,39,0	1/1:9,0:9:20.89:160,21,0	1/1:31,0:30:79.09:513,79,0	1/1:17,0:17:10.12:307,10,0	0/0:18,0:19:31.47:0,31,315	0/0:10,0:11:27.02:0,27,262	0/0:8,0:8:10.48:0,10,135	1/1:10,0:10:28.18:225,28,0	1/1:28,0:28:80.69:651,81,0	1/1:14,0:14:36.88:227,37,0	0/0:8,0:7:8.94:0,9,96	1/1:22,3:25:69.72:418,70,0	1/1:15,0:15:44.85:359,45,0	1/1:28,0:27:53.29:334,53,0	1/1:34,0:34:82.63:410,83,0	1/1:15,0:15:33.94:199,34,0	1/1:13,0:13:38.65:290,39,0	1/1:17,0:17:47.87:389,48,0	1/1:11,0:11:23.41:169,23,0	1/1:19,0:19:53.81:430,54,0	0/0:14,0:14:30.82:0,31,356	1/1:24,2:26:67.35:361,67,0	0/0:7,0:6:14.46:0,14,116
chr10	102943789	.	GGTTTTTTTTT	G	13098.70	PASS	AB=0.904;AC=30;AF=0.536;AN=56;BaseQRankSum=-3.571;DP=512;FS=8.355;HRun=0;HaplotypeScore=235.7153;InbreedingCoeff=0.4296;MQ=54.89;MQ0=3;MQRankSum=-6.089;QD=35.59;ReadPosRankSum=2.323;VQSLOD=3.4236;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,21:32:90.53:2126,91,0	1/1:1,7:8:24.08:641,24,0	0/0:32,0:11:30.95:0,31,339	0/0:16,0:10:20.99:0,21,284	0/0:15,0:15:37.63:0,38,1000	1/1:5,9:14:38.61:886,39,0	1/1:3,5:9:20.65:503,21,0	0/1:24,0:28:67.05:67,0,586	0/1:7,10:17:10.94:1022,0,11	0/0:21,0:21:59.90:0,60,1591	0/0:12,0:12:33.08:0,33,1100	0/0:10,0:10:27.08:0,27,1041	1/1:4,6:10:30.08:725,30,0	1/1:10,17:27:81.16:1882,81,0	0/1:15,0:15:57.61:58,0,614	0/0:10,0:9:27.08:0,27,933	0/1:25,0:25:99:130,0,537	1/1:7,7:15:45.05:964,45,0	0/1:28,0:28:52.60:53,0,788	0/1:34,0:35:16.93:17,0,1429	0/1:13,0:15:60.04:60,0,417	1/1:5,8:13:38.90:859,39,0	1/1:5,12:17:48.10:1219,48,0	1/1:4,7:11:22.63:531,23,0	1/1:5,14:19:54.04:1329,54,0	0/0:16,0:15:45.11:0,45,1487	0/1:25,0:26:25.65:26,0,1081	0/0:10,0:9:21:0,21,582
chr10	102943798	.	T	TG	2290.41	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-1.042;DP=548;FS=9.214;HRun=0;HaplotypeScore=207.3938;InbreedingCoeff=0.8607;MQ=48.85;MQ0=9;MQRankSum=-7.008;QD=13.80;ReadPosRankSum=1.241;VQSLOD=4.1643;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:59.99:0,60,243	0/0:8,0:8:19.58:0,20,76	0/0:57,0:14:26.35:0,26,203	0/0:29,0:12:2.55:0,3,75	0/0:20,0:20:45.11:0,45,394	0/0:12,0:12:23.32:0,23,93	0/0:9,0:9:13.25:0,13,53	1/1:27,12:34:45.72:575,46,0	0/0:16,0:16:39.29:0,39,181	0/0:23,0:23:67.63:0,68,535	0/0:15,0:15:38.98:0,39,366	0/0:11,0:11:29.31:0,29,242	0/0:9,0:9:19.46:0,19,93	0/0:22,0:22:41.42:0,41,188	0/0:15,0:15:41.67:0,42,243	0/0:15,0:14:38.13:0,38,307	0/1:27,0:27:5.24:5,0,156	0/0:12,0:12:24.48:0,24,85	1/1:13,15:27:57.59:447,58,0	1/1:7,25:32:66.19:633,66,0	1/1:9,5:14:35.40:248,35,0	0/0:11,0:11:23.45:0,23,100	0/0:13,0:13:29.50:0,30,128	0/0:10,0:10:14.87:0,15,67	0/0:17,0:17:35.22:0,35,151	0/0:18,0:17:50.23:0,50,444	1/1:10,16:26:69.97:558,70,0	0/0:11,0:11:21:0,21,195
chr10	102943799	.	T	TG	800.21	PASS	AB=0.990;AC=20;AF=0.357;AN=56;BaseQRankSum=4.072;DP=564;FS=15.788;HRun=0;HaplotypeScore=221.9473;InbreedingCoeff=0.3209;MQ=48.26;MQ0=9;MQRankSum=-2.748;QD=2.96;ReadPosRankSum=-5.291;VQSLOD=1.0962;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:5.88:116,6,0	1/1:9,0:9:6.09:64,6,0	0/0:57,0:14:6.48:0,6,102	0/1:30,0:13:3.03:3,0,78	0/0:20,0:20:45.49:0,45,395	1/1:12,0:12:10.01:95,10,0	0/1:13,0:13:3.47:22,0,3	0/0:37,2:34:24.06:0,24,131	0/1:17,0:16:30.54:35,0,31	0/0:23,0:23:67.70:0,68,549	0/0:15,0:15:39.02:0,39,373	0/0:11,0:11:29:0,29,243	0/1:9,0:9:6.37:18,0,6	0/1:23,0:23:2.47:95,0,2	0/0:15,0:15:41.43:0,41,232	0/0:15,0:14:38.12:0,38,306	1/1:13,13:26:42.42:294,42,0	1/1:12,0:12:8.20:92,8,0	0/1:24,3:26:8.46:8,0,41	0/0:30,1:31:36.45:0,36,149	0/0:13,1:14:8.30:0,8,35	0/1:12,0:12:1.36:46,0,1	0/1:14,0:14:13.99:17,0,14	0/1:14,0:14:8:30,0,8	0/1:19,0:19:8.17:39,0,8	0/0:17,0:16:47.21:0,47,413	0/0:26,0:26:22.84:0,23,99	0/0:11,0:11:21:0,21,195
chr10	102943801	.	T	TG	2956.63	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-1.349;DP=576;FS=5.278;HRun=0;HaplotypeScore=223.1971;InbreedingCoeff=0.9427;MQ=47.90;MQ0=9;MQRankSum=-7.128;QD=15.98;ReadPosRankSum=3.395;VQSLOD=3.9758;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:71.20:0,71,363	0/0:10,0:10:20.74:0,21,95	0/0:59,0:14:11.16:0,11,104	0/0:30,0:13:0.22:0,0,76	0/0:20,0:20:46.06:0,46,399	0/0:12,0:12:15.65:0,16,99	0/0:13,0:13:27.61:0,28,156	1/1:38,2:35:87.65:615,88,0	0/0:17,0:16:36.82:0,37,189	0/0:23,0:23:68.14:0,68,554	0/0:15,0:15:38.98:0,39,365	0/0:11,0:11:29.31:0,29,243	0/0:9,0:9:24.10:0,24,122	0/0:23,0:23:46.36:0,46,250	1/1:4,10:14:41.70:334,42,0	0/0:15,0:14:37.82:0,38,308	1/1:14,1:29:41.91:227,42,0	0/0:12,0:12:21.40:0,21,86	1/1:25,3:27:61.46:478,61,0	1/1:31,2:33:83.86:681,84,0	1/1:13,1:14:35.92:255,36,0	0/0:12,0:12:27.55:0,28,137	0/0:14,0:14:30.14:0,30,161	0/0:14,0:14:24.02:0,24,123	0/0:19,0:19:48.38:0,48,246	0/0:17,0:16:47.21:0,47,419	1/1:27,0:27:70.63:564,71,0	0/0:12,0:12:23.74:0,24,206
chr10	102943834	.	A	AT	6513	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=10.690;DP=516;FS=6.508;HRun=8;HaplotypeScore=178.8486;InbreedingCoeff=0.9105;MQ=57.33;MQ0=4;MQRankSum=-6.985;QD=16.74;ReadPosRankSum=2.939;VQSLOD=3.3009;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,30:37:81.20:917,81,0	1/1:2,14:16:36.11:416,36,0	0/0:26,0:12:9.29:0,9,79	0/1:28,0:13:6:6,0,91	0/0:17,0:17:42.02:0,42,384	1/1:2,9:11:21.06:242,21,0	1/1:3,16:19:36.11:415,36,0	1/1:12,0:21:41.13:205,41,0	1/1:5,15:19:42.12:484,42,0	0/0:12,0:12:20.98:0,21,187	0/0:15,0:15:26.98:0,27,247	0/0:11,0:11:23.89:0,24,220	1/1:4,8:12:27.08:311,27,0	1/1:2,15:17:42.12:484,42,0	1/1:8,0:15:17.04:87,17,0	0/0:18,0:18:32.92:0,33,297	1/1:9,22:31:60.18:690,60,0	1/1:3,8:11:21.06:242,21,0	1/1:9,0:20:31:154,31,0	1/1:11,0:25:37.71:206,38,0	1/1:5,0:11:15.76:76,16,0	1/1:2,10:12:27.08:308,27,0	1/1:5,7:12:18.05:208,18,0	1/1:2,19:21:42.12:483,42,0	1/1:7,13:21:36.04:385,36,0	0/0:17,0:16:26.98:0,27,247	1/1:11,0:23:37.07:194,37,0	0/0:10,0:10:11.96:0,12,109
chr10	102944853	.	G	GC	3147.97	PASS	AB=0.967;AC=36;AF=0.643;AN=56;BaseQRankSum=12.071;DP=363;FS=99.113;HRun=1;HaplotypeScore=195.1413;InbreedingCoeff=0.7125;MQ=73.15;MQ0=5;MQRankSum=-11.561;QD=17.69;ReadPosRankSum=0.203;VQSLOD=-0.2316;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,4:14:1.76:183,2,0	1/1:3,0:3:9.03:119,9,0	0/0:24,0:21:60.17:0,60,747	0/0:17,0:15:42.07:0,42,500	0/0:30,0:30:87.28:0,87,1128	0/1:9,0:9:17.65:197,0,18	1/1:6,0:6:14.78:169,15,0	0/1:13,1:13:9.28:280,0,9	1/1:4,3:7:8.99:104,9,0	0/0:17,0:17:51.16:0,51,659	0/0:16,0:16:48.16:0,48,622	0/0:18,0:18:54.18:0,54,700	1/1:9,0:9:1.18:59,1,0	1/1:6,0:6:11.37:98,11,0	1/1:15,0:15:7.29:291,7,0	0/0:21,0:20:60.18:0,60,764	1/1:9,0:9:18.06:242,18,0	1/1:5,1:5:6.02:80,6,0	1/1:7,0:7:9.81:165,10,0	1/1:13,0:13:25.11:268,25,0	1/1:14,0:13:21.02:252,21,0	1/1:11,0:11:25.77:256,26,0	1/1:7,0:7:14.96:160,15,0	1/1:5,1:6:6.02:73,6,0	1/1:10,0:10:11.54:144,12,0	0/0:30,0:30:87.28:0,87,1130	1/1:11,1:12:17.58:214,18,0	0/0:12,0:12:36.12:0,36,467
chr10	102951453	.	C	CGTGTGTGTGTGT	21842.59	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=7.297;DP=770;FS=1.335;HRun=0;HaplotypeScore=283.3513;InbreedingCoeff=0.8566;MQ=53.36;MQ0=7;MQRankSum=-14.219;QD=40.75;ReadPosRankSum=-4.381;VQSLOD=3.6069;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,7:36:21.06:1182,21,0	1/1:3,1:5:9.03:471,9,0	0/1:36,0:19:15.88:16,0,197	0/0:46,0:20:28.16:0,28,473	0/0:19,0:19:32.84:0,33,1131	1/1:18,6:27:27.09:1334,27,0	1/1:19,7:26:21.07:1179,21,0	1/1:38,0:38:45.14:1356,45,0	1/1:23,14:39:48.16:2771,48,0	0/0:25,0:25:57.15:0,57,1720	0/0:9,0:10:21.07:0,21,689	0/0:39,0:40:96.31:0,96,3168	1/1:17,8:29:33.11:1514,33,0	1/1:22,11:32:40.82:2403,41,0	1/1:17,0:35:36.12:1400,36,0	0/0:32,0:32:75.24:0,75,2457	1/1:19,7:28:27.09:1336,27,0	1/1:11,3:16:15.05:826,15,0	1/1:20,0:26:36.12:970,36,0	1/1:13,0:17:13.15:219,13,0	1/1:40,0:46:16.72:698,17,0	1/1:4,7:12:12.04:707,12,0	1/1:9,0:13:3.01:117,3,0	1/1:18,6:25:18.04:950,18,0	1/1:13,5:19:8.77:470,9,0	0/0:38,0:39:96.33:0,96,3184	1/1:15,0:29:54.19:1923,54,0	0/0:19,0:20:33.10:0,33,1073
chr10	102952910	.	GTCTCTCTC	G	314.72	PASS	AB=1.000;AC=10;AF=0.192;AN=52;BaseQRankSum=2.262;DP=604;FS=17.097;HRun=0;HaplotypeScore=150.3444;InbreedingCoeff=0.5907;MQ=68.32;MQ0=9;MQRankSum=-2.631;QD=2.08;ReadPosRankSum=1.153;VQSLOD=2.0384;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:5.46:5,0,1167	0/0:12,0:12:15.05:0,15,480	./.	./.	0/0:19,0:19:3.01:0,3,107	0/0:19,0:19:21.54:0,22,706	0/0:22,0:23:21.07:0,21,600	0/1:29,0:29:0.23:15,0,0	0/0:24,0:24:24.03:0,24,778	0/0:19,0:19:32.78:0,33,886	0/0:13,0:14:15.05:0,15,456	0/0:21,0:20:15.05:0,15,520	0/0:21,0:21:12.02:0,12,256	0/0:24,0:24:12.04:0,12,357	1/1:14,0:24:10.40:128,10,0	0/0:22,0:23:33.11:0,33,975	0/0:20,0:20:3.01:0,3,48	0/0:15,0:14:12.04:0,12,336	0/0:10,0:10:0.89:0,1,2	1/1:15,6:20:3:38,3,0	1/1:29,0:28:15.48:193,15,0	0/0:17,0:17:6.02:0,6,149	0/0:17,0:16:15.99:0,16,412	0/0:26,0:26:33.10:0,33,1031	0/0:18,0:18:12.03:0,12,299	0/0:20,0:21:36.12:0,36,1165	1/1:7,7:14:2.89:74,3,0	0/0:21,0:21:12.04:0,12,364
chr10	102952954	.	C	CTGTGTGTGTGTG	313.09	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=1.311;DP=629;FS=23.502;HRun=0;HaplotypeScore=198.5251;InbreedingCoeff=0.1333;MQ=58.70;MQ0=7;MQRankSum=-1.363;QD=2.85;ReadPosRankSum=-2.514;VQSLOD=0.6512;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:1.13:0,1,387	0/0:10,0:10:25.73:0,26,804	0/0:15,0:9:23.66:0,24,646	0/0:27,0:13:26.66:0,27,628	0/0:21,0:21:45.63:0,46,1412	0/0:16,0:15:22.37:0,22,692	0/1:25,0:25:25.90:26,0,416	0/0:21,0:21:51.03:0,51,1390	0/0:23,0:23:59.70:0,60,1719	0/0:20,0:20:22.22:0,22,1618	0/0:16,0:16:42.57:0,43,1286	0/0:19,0:19:44.54:0,45,1315	0/1:32,0:32:59.51:60,0,71	0/0:26,0:26:5.55:0,6,185	0/0:29,0:29:59.88:0,60,1949	0/0:29,0:29:56.95:0,57,2195	1/1:4,7:16:5.67:293,6,0	0/1:12,0:12:29.52:30,0,123	0/0:14,0:13:36.09:0,36,1183	0/0:20,0:20:32.99:0,33,1036	0/0:34,0:34:75.03:0,75,2573	0/0:19,0:18:34.06:0,34,1066	0/0:28,0:28:52.37:0,52,1331	0/1:25,0:24:27.16:27,0,653	0/0:20,0:20:6.02:0,6,142	0/0:25,0:25:67.94:0,68,1574	0/0:28,0:27:63.03:0,63,1923	0/0:15,0:13:36.12:0,36,1246
chr10	102952958	.	C	CTG	2520.11	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=2.595;DP=640;FS=5.790;HRun=0;HaplotypeScore=98.2258;InbreedingCoeff=0.8325;MQ=59.28;MQ0=5;MQRankSum=3.381;QD=7.66;ReadPosRankSum=2.707;VQSLOD=3.0184;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,31:43:5.75:106,6,0	1/1:10,0:10:23.93:267,24,0	0/0:17,0:11:32.81:0,33,263	0/1:29,0:14:6.91:7,0,98	0/0:22,0:22:53.89:0,54,435	1/1:14,0:14:18.78:140,19,0	1/1:3,22:25:15.61:225,16,0	0/0:25,0:25:59.87:0,60,509	1/1:22,1:23:55.03:503,55,0	0/0:22,0:22:53.93:0,54,493	0/0:14,0:14:38.96:0,39,325	0/0:20,0:20:41.94:0,42,361	1/1:4,29:33:3.04:54,3,0	1/1:5,22:28:5.97:106,6,0	0/0:30,0:30:59.77:0,60,486	0/0:26,0:26:50.32:0,50,579	1/1:14,0:15:14.74:117,15,0	1/1:4,10:14:3.01:53,3,0	0/0:14,0:13:35.98:0,36,315	0/0:21,0:21:41.79:0,42,337	0/0:35,0:35:86.07:0,86,696	1/1:18,0:17:41.85:346,42,0	1/1:28,0:28:39.52:380,40,0	1/1:5,22:26:22.89:376,23,0	1/1:2,18:21:3.01:53,3,0	0/0:23,0:23:44.84:0,45,397	0/0:29,0:28:62.42:0,62,482	0/0:13,0:12:34.52:0,35,254
chr10	102955910	.	TAC	T	2277.91	PASS	AB=0.959;AC=16;AF=0.286;AN=56;BaseQRankSum=4.884;DP=654;FS=24.219;HRun=0;HaplotypeScore=138.3655;InbreedingCoeff=-0.0979;MQ=78.04;MQ0=1;MQRankSum=0.056;QD=5.96;ReadPosRankSum=11.402;VQSLOD=0.1787;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:49,4:53:99:402,0,130	0/1:10,0:10:20.56:46,0,21	0/0:13,0:12:1.40:0,1,403	0/0:25,0:25:61.94:0,62,677	0/0:16,0:16:38.77:0,39,429	0/1:23,0:23:28.73:93,0,29	0/1:28,1:29:85.92:174,0,86	0/0:27,0:27:73.97:0,74,496	1/1:24,0:23:7.40:166,7,0	0/0:10,0:10:23.23:0,23,255	0/0:13,0:13:34.66:0,35,406	0/0:20,0:21:56.56:0,57,691	1/1:21,1:22:5.16:191,5,0	0/1:34,0:34:26.62:185,0,27	0/0:27,0:30:51.60:0,52,279	0/0:21,0:24:44.60:0,45,401	0/1:36,2:38:15.67:290,0,16	0/1:23,0:23:33.14:148,0,33	0/0:18,0:20:20.70:0,21,196	0/1:23,0:26:19.96:20,0,130	0/0:28,0:29:38.17:0,38,273	0/1:29,0:29:52.64:183,0,53	0/1:14,3:17:30.12:167,0,30	0/1:35,1:36:86.09:236,0,86	0/1:17,1:18:7.89:139,0,8	0/0:15,0:15:42.06:0,42,476	0/0:24,0:24:52.50:0,53,259	0/0:5,0:5:15.03:0,15,220
chr10	102955911	.	ACC	A	9640.70	PASS	AB=0.744;AC=40;AF=0.714;AN=56;BaseQRankSum=1.628;DP=650;FS=22.956;HRun=11;HaplotypeScore=116.1539;InbreedingCoeff=0.8205;MQ=77.52;MQ0=1;MQRankSum=-1.500;QD=17.69;ReadPosRankSum=4.919;VQSLOD=1.9521;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,36:53:99:1149,108,0	1/1:2,8:10:24.05:255,24,0	0/1:10,0:11:5.22:5,0,204	0/0:22,0:25:11.68:0,12,200	0/0:13,0:15:17.98:0,18,177	1/1:2,20:23:30.88:500,31,0	1/1:8,21:29:60.13:639,60,0	1/1:25,0:25:28.60:112,29,0	1/1:2,22:23:60.14:639,60,0	0/0:9,0:10:8.52:0,9,101	0/0:9,0:13:22.53:0,23,236	0/0:20,0:22:37.49:0,37,361	1/1:3,19:22:57.14:607,57,0	1/1:4,28:33:66.06:757,66,0	1/1:29,0:29:62.27:241,62,0	0/1:10,2:24:46.35:46,0,104	1/1:6,32:38:84.39:1065,84,0	1/1:4,19:23:57.13:607,57,0	1/1:20,0:20:33.55:130,34,0	1/1:27,0:27:54.50:211,55,0	1/1:29,0:29:46.62:179,47,0	1/1:5,23:29:56.86:587,57,0	1/1:8,9:17:39.04:403,39,0	1/1:9,27:36:78.16:830,78,0	1/1:3,15:18:45.11:478,45,0	0/0:15,0:15:15.02:0,15,170	1/1:24,0:24:51.93:201,52,0	0/0:5,0:5:14.51:0,15,151
chr10	102955919	.	CCCCA	C	5908.67	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-7.684;DP=621;FS=11.868;HRun=0;HaplotypeScore=154.4545;InbreedingCoeff=0.9848;MQ=73.64;MQ0=1;MQRankSum=-3.649;QD=38.87;ReadPosRankSum=0.064;VQSLOD=4.3593;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,116,834	0/0:8,0:8:23.81:0,24,167	0/0:11,0:10:22.92:0,23,397	0/0:18,0:18:10.27:0,10,466	0/0:14,0:14:21.51:0,22,308	0/0:27,0:27:60.84:0,61,453	0/0:23,0:23:62.50:0,62,441	1/1:7,15:22:48.02:682,48,0	0/0:24,0:23:68.51:0,69,491	0/0:13,0:13:21.01:0,21,347	0/0:11,0:11:24.07:0,24,438	0/0:21,0:21:51.04:0,51,707	0/0:21,0:21:59.97:0,60,416	0/0:33,0:33:83.18:0,83,634	1/1:4,25:29:75.19:1283,75,0	0/0:26,0:26:72.09:0,72,904	0/0:41,0:41:99:0,116,852	0/0:20,0:20:56.54:0,57,397	1/1:5,13:18:48.08:709,48,0	1/1:4,24:28:81.06:1234,81,0	1/1:1,27:28:54.18:947,54,0	0/0:26,0:26:55.11:0,55,378	0/0:16,0:16:44.70:0,45,331	0/0:33,0:33:89.36:0,89,656	0/0:18,0:18:50.61:0,51,388	0/0:16,0:16:39.03:0,39,491	1/1:0,27:27:60.21:1053,60,0	0/0:5,0:5:15.02:0,15,236
chr10	102955920	.	CCCA	C	2968.47	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.526;DP=612;FS=9.014;HRun=0;HaplotypeScore=152.1843;InbreedingCoeff=0.9803;MQ=74.68;MQ0=1;MQRankSum=-3.485;QD=20.47;ReadPosRankSum=-0.316;VQSLOD=2.9775;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,101,418	0/0:8,0:8:20.77:0,21,79	0/0:11,0:10:14.73:0,15,271	0/0:19,0:19:23.35:0,23,327	0/0:12,0:12:18.37:0,18,182	0/0:27,0:27:44.72:0,45,263	0/0:23,0:23:54.45:0,54,220	1/1:17,0:17:47.98:416,48,0	0/0:24,0:23:60.81:0,61,271	0/0:14,0:14:24:0,24,308	0/0:11,0:11:21.02:0,21,314	0/0:21,0:21:36.02:0,36,429	0/0:23,0:23:58.23:0,58,256	0/0:33,0:33:69.65:0,70,338	1/1:26,3:29:74.98:658,75,0	0/0:24,0:24:70.77:0,71,618	0/0:40,0:40:99:0,100,446	0/0:20,0:20:49.33:0,49,188	1/1:15,2:17:47.96:412,48,0	1/1:24,3:27:78.32:659,78,0	1/1:27,1:28:54.02:479,54,0	0/0:24,0:24:33.91:0,34,160	0/0:16,0:16:39.08:0,39,184	0/0:32,0:32:79.38:0,79,353	0/0:18,0:18:43.53:0,44,205	0/0:19,0:19:36.02:0,36,408	1/1:27,0:27:60.02:533,60,0	0/0:5,0:5:8.86:0,9,143
chr10	102956230	.	AT	A	2006.01	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=15.001;DP=608;FS=2.234;HRun=12;HaplotypeScore=134.0095;InbreedingCoeff=0.8224;MQ=69.56;MQ0=0;MQRankSum=-2.302;QD=4.47;ReadPosRankSum=2.965;VQSLOD=1.7453;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:39:54.88:170,55,0	1/1:8,0:8:14.26:41,14,0	0/0:18,0:16:9.81:0,10,89	0/0:10,0:9:6.44:0,6,52	0/0:23,0:23:25.05:0,25,568	1/1:10,0:10:20.37:59,20,0	1/1:22,0:22:36.21:108,36,0	1/1:33,0:33:49.92:145,50,0	1/1:20,0:20:32.58:94,33,0	0/0:17,2:19:1.61:0,2,375	0/0:15,0:15:39.07:0,39,391	0/0:18,0:19:50.91:0,51,484	1/1:19,0:19:24.44:71,24,0	1/1:23,0:23:42.67:136,43,0	1/1:30,0:30:50.16:152,50,0	0/0:25,0:25:42.90:0,43,616	0/1:27,0:27:12.96:170,0,13	1/1:22,0:22:21.59:87,22,0	1/1:26,0:26:49.52:146,50,0	1/1:26,0:26:43.91:144,44,0	1/1:26,0:26:29.23:90,29,0	1/1:26,0:26:43.88:135,44,0	1/1:17,0:17:32.76:110,33,0	1/1:22,0:22:30.55:89,31,0	1/1:22,0:22:42.25:133,42,0	0/0:21,1:22:27.53:0,28,439	1/1:30,0:29:42.01:128,42,0	0/0:7,1:8:0.75:0,1,172
chr10	102956239	.	TTTTA	T	5029.59	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=15.048;DP=623;FS=10.748;HRun=0;HaplotypeScore=161.4153;InbreedingCoeff=0.9424;MQ=67.90;MQ0=0;MQRankSum=-3.934;QD=11.40;ReadPosRankSum=4.460;VQSLOD=3.8101;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:41,1:42:61.82:434,62,0	1/1:8,1:9:23.08:160,23,0	0/0:15,0:13:26.13:0,26,425	0/0:10,0:9:16.99:0,17,226	0/0:23,0:23:69.21:0,69,1732	1/1:11,0:11:28.58:144,29,0	1/1:24,0:24:37.94:293,38,0	1/1:35,1:36:45.88:502,46,0	1/1:20,0:20:24.15:208,24,0	0/0:17,0:17:51.17:0,51,1235	0/0:16,0:16:45.15:0,45,1113	0/0:19,0:19:57.16:0,57,1374	1/1:16,1:17:34.51:215,35,0	1/1:21,1:22:55.31:307,55,0	1/1:30,1:31:50.89:363,51,0	0/0:24,0:24:72.23:0,72,1831	0/0:29,0:29:37.50:0,37,651	1/1:21,0:21:9.94:199,10,0	1/1:29,0:29:39.11:367,39,0	1/1:28,0:28:60.94:320,61,0	1/1:28,0:28:41.21:225,41,0	1/1:28,0:28:56.32:302,56,0	0/1:19,0:19:2.07:159,0,2	1/1:25,1:26:22.42:234,22,0	1/1:21,0:21:42.36:241,42,0	0/0:21,0:21:63.18:0,63,1412	1/1:27,2:29:56.70:359,57,0	0/0:8,0:8:24.08:0,24,563
chr10	102956240	.	TTTA	T	15216.59	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=7.926;DP=608;FS=4.657;HRun=0;HaplotypeScore=112.7964;InbreedingCoeff=0.9776;MQ=67.55;MQ0=0;MQRankSum=-5.667;QD=35.39;ReadPosRankSum=1.934;VQSLOD=5.7900;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,39:40:87.14:1223,87,0	1/1:1,8:9:24.02:333,24,0	0/0:15,0:13:22.46:0,22,287	0/0:9,0:8:4.94:0,5,127	0/0:23,0:23:65.40:0,65,1411	1/1:0,11:11:30.10:476,30,0	1/1:9,17:26:73.24:964,73,0	1/1:1,33:34:99:1332,99,0	1/1:0,19:19:48.16:761,48,0	0/0:17,0:17:48.16:0,48,983	0/0:16,0:16:45.13:0,45,910	0/0:18,0:18:54.17:0,54,1110	1/1:1,16:17:36.12:550,36,0	1/1:2,20:22:60.18:862,60,0	1/1:2,29:31:72.23:1089,72,0	0/0:23,0:23:69.22:0,69,1478	0/0:28,0:28:15.56:0,16,251	1/1:1,19:20:28.42:782,28,0	1/1:0,27:27:81.22:1197,81,0	1/1:1,24:25:69.01:917,69,0	1/1:0,27:27:48.07:688,48,0	1/1:1,27:28:68.52:960,69,0	1/1:1,18:19:46.32:653,46,0	1/1:1,24:25:45.15:696,45,0	1/1:1,20:21:60.15:859,60,0	0/0:21,0:21:63.18:0,63,1172	1/1:2,27:29:59.80:876,60,0	0/0:8,0:8:24.08:0,24,448
chr10	102956242	.	TA	T	6549.77	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=13.272;DP=607;FS=0.000;HRun=4;HaplotypeScore=123.4137;InbreedingCoeff=0.9822;MQ=68.30;MQ0=0;MQRankSum=-3.690;QD=14.33;ReadPosRankSum=3.369;VQSLOD=3.5079;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:40:76.03:452,76,0	1/1:9,0:9:23.41:138,23,0	0/0:15,0:13:9.38:0,9,85	0/0:10,0:9:10.64:0,11,96	0/0:25,0:25:71.63:0,72,848	1/1:11,0:11:29.24:171,29,0	1/1:25,0:25:67.74:446,68,0	1/1:34,0:34:94.05:594,94,0	1/1:19,0:19:46.79:273,47,0	0/0:17,0:17:45.97:0,46,512	0/0:15,0:15:39.12:0,39,485	0/0:17,0:17:48.12:0,48,581	1/1:17,0:17:35.07:203,35,0	1/1:22,0:22:49.67:291,50,0	1/1:31,0:31:67.76:401,68,0	0/0:22,0:22:64.75:0,65,795	1/1:7,21:28:69.83:844,70,0	1/1:20,0:20:49.67:289,50,0	1/1:27,0:27:76.25:466,76,0	1/1:25,0:25:52.59:311,53,0	1/1:27,0:27:43.88:262,44,0	1/1:28,0:28:61.29:360,61,0	1/1:19,0:19:37.96:224,38,0	1/1:25,0:25:43.85:257,44,0	1/1:21,0:21:48.27:269,48,0	0/0:21,0:21:55.96:0,56,647	1/1:29,0:29:52.35:301,52,0	0/0:8,0:8:15.52:0,16,192
chr10	102957384	.	GTC	G	5798.29	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=12.909;DP=790;FS=6.441;HRun=0;HaplotypeScore=269.0243;InbreedingCoeff=0.9300;MQ=54.58;MQ0=7;MQRankSum=-3.312;QD=11.79;ReadPosRankSum=1.562;VQSLOD=3.9577;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,1:31:8.93:65,9,0	1/1:16,0:16:29.22:219,29,0	0/0:49,0:24:62.48:0,62,731	0/0:53,0:34:45.83:0,46,755	0/0:27,0:27:51.02:0,51,1002	1/1:19,0:19:14.55:119,15,0	1/1:22,1:23:13.14:86,13,0	1/1:2,25:27:73.34:859,73,0	1/1:25,0:25:19.82:167,20,0	0/0:34,0:34:68.90:0,69,1159	0/0:14,0:14:42.14:0,42,739	0/0:26,0:26:59.31:0,59,1054	1/1:30,0:30:40.36:298,40,0	1/1:25,0:25:23.63:169,24,0	1/1:4,33:37:42.14:576,42,0	0/0:25,0:25:68.42:0,68,1131	0/0:27,1:27:0.89:0,1,328	1/1:24,0:24:46.73:331,47,0	1/1:3,14:16:39.07:470,39,0	1/1:0,28:28:39.11:535,39,0	1/1:2,29:31:27.09:370,27,0	1/1:38,0:38:11.93:89,12,0	1/1:25,0:25:23.94:190,24,0	1/1:20,0:21:8.97:70,9,0	1/1:34,1:35:11.93:89,12,0	0/0:29,0:29:74.21:0,74,1277	1/1:10,30:40:93.10:1097,93,0	0/0:11,0:11:26.26:0,26,298
chr10	102957388	.	CTCTG	C	4397.14	PASS	AB=0.992;AC=27;AF=0.482;AN=56;BaseQRankSum=4.886;DP=817;FS=4.968;HRun=0;HaplotypeScore=297.3062;InbreedingCoeff=0.7520;MQ=52.33;MQ0=10;MQRankSum=-3.226;QD=10.97;ReadPosRankSum=-3.858;VQSLOD=3.2781;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,17:31:8.95:88,9,0	1/1:2,14:16:29.49:478,29,0	0/0:57,0:24:47.67:0,48,1240	0/0:62,0:34:62.16:0,62,1389	0/0:28,0:28:77.89:0,78,1695	1/1:6,13:19:15.19:157,15,0	1/1:4,19:24:13.22:198,13,0	0/1:31,0:31:49.06:49,0,309	1/1:5,20:25:25.96:459,26,0	0/0:33,0:33:90.21:0,90,1941	0/0:15,0:15:45.15:0,45,1215	0/0:28,0:28:80.89:0,81,1823	1/1:5,25:31:45.04:725,45,0	1/1:5,21:26:26.85:376,27,0	0/0:36,2:38:33.19:0,33,117	0/0:27,0:27:75.22:0,75,1865	0/0:27,0:26:16.53:0,17,852	1/1:6,17:23:51.01:874,51,0	0/1:15,0:14:44.22:44,0,62	0/0:29,0:29:30.81:0,31,109	0/0:32,0:32:21.33:0,21,75	1/1:0,38:38:12.04:239,12,0	1/1:8,17:25:23.96:215,24,0	1/1:3,18:22:8.78:107,9,0	1/1:2,33:34:12.04:239,12,0	0/0:30,0:30:90.15:0,90,2151	0/1:39,1:40:99:148,0,131	0/0:10,0:10:30.06:0,30,607
chr10	102957390	.	CTG	C	2432.01	PASS	AB=0.952;AC=36;AF=0.643;AN=56;BaseQRankSum=13.630;DP=829;FS=2.884;HRun=0;HaplotypeScore=288.2174;InbreedingCoeff=0.7324;MQ=51.17;MQ0=10;MQRankSum=-3.713;QD=4.60;ReadPosRankSum=3.835;VQSLOD=2.2911;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:1.13:4,1,0	1/1:16,0:16:20:125,20,0	0/0:59,0:25:58.92:0,59,777	0/0:63,0:32:61.96:0,62,784	0/1:25,3:28:11.73:12,0,814	1/1:19,0:19:2.53:18,3,0	1/1:23,0:23:10.06:57,10,0	0/1:31,0:31:99:205,0,115	1/1:26,0:26:29.54:199,30,0	0/0:33,0:34:68.43:0,68,1061	0/0:15,0:15:45.14:0,45,717	0/0:28,1:29:31.73:0,32,963	1/1:30,0:30:35.29:216,35,0	1/1:26,0:26:17.64:109,18,0	1/1:39,0:39:40.72:230,41,0	0/0:28,0:28:72.18:0,72,1097	0/0:28,0:27:51.15:0,51,773	1/1:23,0:23:44.36:281,44,0	1/1:16,0:15:19.32:132,19,0	1/1:30,0:30:37.92:221,38,0	1/1:32,0:32:26.27:152,26,0	1/1:38,0:38:11.82:75,12,0	1/1:25,0:25:2.37:8,2,0	1/1:23,0:23:2.62:19,3,0	1/1:35,0:34:11.82:75,12,0	0/0:31,1:32:49.58:0,50,1217	1/1:37,1:38:72.50:501,73,0	0/0:12,0:12:29.95:0,30,340
chr10	102957412	.	ATGTG	A	3463.01	PASS	AB=0.673;AC=33;AF=0.635;AN=52;BaseQRankSum=9.530;DP=773;FS=7.497;HRun=0;HaplotypeScore=300.2834;InbreedingCoeff=0.6457;MQ=44.23;MQ0=15;MQRankSum=-4.574;QD=7.04;ReadPosRankSum=-3.181;VQSLOD=0.7574;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,13:34:15.01:228,15,0	1/1:9,7:16:17.59:285,18,0	./.	./.	0/0:22,0:22:9.34:0,9,488	1/1:3,10:13:3.21:44,3,0	1/1:18,8:27:7.27:96,7,0	1/1:28,0:28:9.01:84,9,0	1/1:9,14:26:33.09:462,33,0	0/0:23,0:22:35.86:0,36,723	0/0:16,0:16:21.06:0,21,400	0/0:25,0:27:50.61:0,51,895	1/1:21,13:34:21.07:334,21,0	0/1:9,17:27:17.67:204,0,18	1/1:20,0:29:0.35:1,0,0	0/0:27,1:30:3.26:0,3,827	1/1:18,0:25:20.22:181,20,0	0/1:11,13:24:0.28:363,0,0	1/1:16,0:16:9.01:89,9,0	0/1:19,0:27:0.13:0,0,0	0/0:25,0:26:3.01:0,3,53	1/1:24,12:37:6.02:91,6,0	1/1:9,12:22:9.03:141,9,0	1/1:14,17:32:23.86:372,24,0	1/1:20,10:30:3.01:48,3,0	0/0:33,0:35:53.37:0,53,910	1/1:12,0:38:47.89:441,48,0	0/0:10,0:11:20.81:0,21,430
chr10	102960146	.	A	ATTTAT	5597.40	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=-8.666;DP=358;FS=17.021;HRun=0;HaplotypeScore=60.1796;InbreedingCoeff=0.8426;MQ=69.38;MQ0=1;MQRankSum=-3.388;QD=43.06;ReadPosRankSum=3.404;VQSLOD=3.4354;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:19:21.07:640,21,0	1/1:0,3:4:9.03:257,9,0	0/1:14,0:9:12.80:13,0,263	0/0:24,0:14:18.52:0,19,318	0/0:23,0:23:66.20:0,66,1294	1/1:1,10:12:18.06:549,18,0	1/1:0,0:5:12.04:232,12,0	0/0:38,0:38:99:0,105,1905	1/1:0,7:8:21.07:618,21,0	0/0:14,0:14:42.12:0,42,777	0/0:11,0:11:30.09:0,30,533	0/0:12,0:12:36.10:0,36,656	1/1:0,8:8:18.06:549,18,0	1/1:1,5:6:6.02:183,6,0	0/0:10,0:10:30.09:0,30,568	0/0:9,0:9:18.04:0,18,313	0/0:16,0:16:42.10:0,42,770	1/1:1,16:17:33.11:1007,33,0	0/0:19,0:19:57.16:0,57,964	0/0:12,0:12:33.10:0,33,662	0/0:4,0:4:12.01:0,12,157	1/1:0,0:3:3.01:74,3,0	1/1:1,7:9:12.04:306,12,0	1/1:1,4:5:6.02:183,6,0	1/1:0,18:20:33.11:988,33,0	0/0:18,0:18:54.17:0,54,1044	0/0:14,0:14:39.12:0,39,726	0/0:3,0:3:9.03:0,9,192
chr10	102960774	.	GGATCT	G	478.16	PASS	AC=12;AF=0.375;AN=32;BaseQRankSum=5.473;DP=282;FS=4.759;HRun=0;HaplotypeScore=66.5960;InbreedingCoeff=0.7249;MQ=46.22;MQ0=14;MQRankSum=-5.182;QD=21.73;ReadPosRankSum=-4.403;VQSLOD=2.1637;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:22,0:2:6.02:0,6,114	./.	0/0:34,0:34:81.21:0,81,2508	./.	./.	./.	1/1:1,2:3:6.02:118,6,0	0/0:24,0:24:66.23:0,66,2013	0/0:30,0:30:72.25:0,72,2255	0/0:23,0:23:60.21:0,60,1879	./.	1/1:2,1:2:3.01:58,3,0	./.	0/0:16,0:15:39.13:0,39,1220	0/0:25,0:25:51.18:0,51,1588	0/0:4,0:2:3.01:0,3,94	./.	1/1:1,1:2:3.01:48,3,0	./.	./.	1/1:1,1:1:3.01:57,3,0	./.	1/1:3,2:5:6.02:128,6,0	0/0:24,0:24:66.23:0,66,2032	1/1:4,3:7:12.04:197,12,0	0/0:18,0:16:45.15:0,45,1401
chr10	102960845	.	TC	T	4359.69	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=14.631;DP=340;FS=18.525;HRun=2;HaplotypeScore=95.2125;InbreedingCoeff=0.9008;MQ=67.00;MQ0=0;MQRankSum=-12.477;QD=36.03;ReadPosRankSum=0.492;VQSLOD=2.9841;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:11:30.09:372,30,0	1/1:0,1:1:3.01:39,3,0	0/0:12,0:12:27.09:0,27,405	0/0:13,1:14:35.86:0,36,463	0/0:28,0:28:84.28:0,84,1249	1/1:0,9:9:27.09:348,27,0	1/1:1,5:6:18.05:223,18,0	1/1:0,9:9:27.09:348,27,0	1/1:1,6:7:18.06:231,18,0	0/0:30,0:30:90.29:0,90,1305	0/0:28,0:28:81.26:0,81,1192	0/0:20,0:20:60.19:0,60,872	1/1:0,6:6:18.06:232,18,0	1/1:0,7:7:21.07:271,21,0	1/1:0,4:4:12.04:155,12,0	0/0:17,0:17:48.16:0,48,719	0/0:26,0:26:75.25:0,75,1113	1/1:2,9:11:27:347,27,0	1/1:1,2:3:6.02:78,6,0	1/1:0,11:11:33.11:419,33,0	1/1:0,1:1:3.01:39,3,0	1/1:0,3:3:9.03:116,9,0	1/1:2,11:13:33.11:425,33,0	1/1:0,2:2:6.02:78,6,0	1/1:0,10:10:30.10:388,30,0	0/0:24,0:24:72.24:0,72,1061	1/1:1,6:7:21.06:252,21,0	0/0:19,0:19:57.17:0,57,826
chr10	102960846	.	CCT	C	2235.28	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=14.801;DP=347;FS=21.302;HRun=0;HaplotypeScore=109.0994;InbreedingCoeff=0.8724;MQ=66.69;MQ0=0;MQRankSum=-12.329;QD=17.88;ReadPosRankSum=0.814;VQSLOD=2.2476;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,1:11:29.65:227,30,0	1/1:1,0:1:2.98:22,3,0	0/0:12,0:11:27.09:0,27,541	0/0:14,0:14:36.06:0,36,662	0/0:29,0:29:87.30:0,87,1745	1/1:9,0:9:26.73:190,27,0	1/1:6,1:7:17.78:141,18,0	1/1:10,0:10:10.99:171,11,0	1/1:6,0:6:17.89:136,18,0	0/0:30,0:30:90.30:0,90,1757	0/0:28,0:28:81.28:0,81,1631	0/0:23,0:23:69.24:0,69,1328	1/1:8,0:8:3.30:92,3,0	1/1:8,0:8:20.83:147,21,0	1/1:6,0:6:11.87:81,12,0	0/0:17,0:17:48.16:0,48,975	0/0:26,0:26:75.26:0,75,1520	1/1:10,0:10:26.63:184,27,0	1/1:2,0:2:5.96:44,6,0	1/1:11,0:11:32.74:246,33,0	1/1:2,0:2:2.94:18,3,0	1/1:3,0:3:8.93:63,9,0	1/1:11,1:12:32.81:250,33,0	1/1:2,0:2:5.97:48,6,0	1/1:10,0:10:29.82:227,30,0	0/0:24,0:24:72.24:0,72,1429	1/1:6,1:7:20.46:162,20,0	0/0:19,0:19:57.20:0,57,1137
chr10	102961121	.	C	CAGGGG	15678.56	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=8.396;DP=459;FS=326.150;HRun=0;HaplotypeScore=113.9064;InbreedingCoeff=0.9708;MQ=82.30;MQ0=0;MQRankSum=-14.647;QD=71.59;ReadPosRankSum=-3.148;VQSLOD=-0.5134;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,13:21:42.14:1280,42,0	1/1:2,1:3:9.03:219,9,0	0/0:17,0:17:48.13:0,48,912	0/0:15,0:16:22.01:0,22,458	0/0:29,0:29:87.30:0,87,1888	1/1:7,10:17:48.15:1355,48,0	1/1:5,9:14:39.13:1217,39,0	1/1:7,16:24:54.19:1579,54,0	1/1:0,9:9:27.09:852,27,0	0/0:27,0:27:78.27:0,78,1673	0/0:19,0:19:57.17:0,57,1195	0/0:27,0:27:81.26:0,81,1719	1/1:4,8:12:33.11:957,33,0	1/1:2,8:10:27.09:819,27,0	1/1:6,15:21:60.16:1646,60,0	0/0:21,0:21:57.20:0,57,1238	0/0:30,0:30:84.29:0,84,1823	1/1:4,6:10:27.09:825,27,0	1/1:5,5:10:20.75:563,21,0	1/1:3,9:12:36.12:1077,36,0	1/1:4,1:5:8.99:154,9,0	1/1:2,8:10:30.10:886,30,0	1/1:0,5:5:9.03:279,9,0	1/1:7,7:14:17.53:484,18,0	1/1:3,7:10:30.08:732,30,0	0/0:37,0:37:99:0,99,2150	1/1:5,7:12:24.08:756,24,0	0/0:17,0:17:48.14:0,48,977
chr10	102961158	.	T	TC	9681.99	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=17.598;DP=547;FS=66.354;HRun=0;HaplotypeScore=111.3104;InbreedingCoeff=0.9925;MQ=80.89;MQ0=0;MQRankSum=-13.592;QD=33.62;ReadPosRankSum=-4.057;VQSLOD=-0.5850;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:33:87.01:1070,87,0	1/1:0,5:5:15.05:198,15,0	0/0:27,0:26:74.34:0,74,966	0/0:12,0:12:32.91:0,33,398	0/0:32,0:32:93.27:0,93,1230	1/1:2,13:15:32.59:409,33,0	1/1:5,11:16:33.51:415,34,0	1/1:5,15:20:54.57:680,55,0	1/1:0,11:11:30.10:396,30,0	0/0:32,0:32:93.30:0,93,1274	0/0:25,0:25:72.23:0,72,987	0/0:28,0:28:84.28:0,84,1174	1/1:0,17:17:48.16:632,48,0	1/1:1,9:10:27.03:342,27,0	1/1:4,19:23:63.07:791,63,0	0/0:19,0:19:57.19:0,57,797	0/0:31,0:31:90.28:0,90,1240	1/1:1,14:15:39.97:495,40,0	1/1:0,13:13:39.12:513,39,0	1/1:2,14:16:45.04:547,45,0	1/1:1,6:7:12.04:153,12,0	1/1:2,13:15:42:507,42,0	1/1:1,8:9:27.08:340,27,0	1/1:1,26:27:70.82:894,71,0	1/1:1,18:19:57.12:726,57,0	0/0:38,0:38:99:0,114,1564	1/1:3,14:17:45.09:574,45,0	0/0:15,0:15:45.15:0,45,627
chr10	102961649	.	AGG	A	21586.86	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=19.162;DP=719;FS=11.507;HRun=2;HaplotypeScore=173.7019;InbreedingCoeff=0.9979;MQ=68.26;MQ0=0;MQRankSum=-5.628;QD=44.42;ReadPosRankSum=3.351;VQSLOD=3.3807;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,58:58:99:2592,160,0	1/1:0,8:8:24.08:391,24,0	0/0:28,0:25:75.25:0,75,1437	0/0:27,0:27:67.47:0,67,1266	0/0:17,0:17:51.16:0,51,978	1/1:0,26:26:63.22:1027,63,0	1/1:1,27:28:34.31:1225,34,0	1/1:0,29:29:87.26:1368,87,0	1/1:0,22:22:60.20:979,60,0	0/0:23,0:23:69.23:0,69,1364	0/0:14,0:14:42.14:0,42,853	0/0:47,0:47:99:0,141,2795	1/1:0,33:33:96.33:1563,96,0	1/1:0,26:26:69.24:1124,69,0	1/1:0,29:29:78.27:1272,78,0	0/0:21,1:22:17.29:0,17,1210	0/0:21,0:21:60.21:0,60,1219	1/1:0,12:12:33.11:538,33,0	1/1:0,34:34:99:1590,99,0	1/1:0,20:20:51.17:831,51,0	1/1:0,37:37:99:1614,99,0	1/1:0,27:27:75.26:1222,75,0	1/1:0,14:14:36.12:587,36,0	1/1:0,39:39:99:1712,105,0	1/1:0,19:19:54.18:881,54,0	0/0:26,0:26:78.27:0,78,1583	1/1:1,24:25:66.22:1069,66,0	0/0:8,0:8:24:0,24,406
chr10	102962394	.	G	GGGTTCC	34836.93	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=15.207;DP=708;FS=3.861;HRun=0;HaplotypeScore=190.2792;InbreedingCoeff=0.9987;MQ=88.47;MQ0=0;MQRankSum=-20.255;QD=81.97;ReadPosRankSum=0.969;VQSLOD=5.5775;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,25:42:84.29:3008,84,0	1/1:2,6:8:18.06:601,18,0	0/0:42,0:42:99:0,117,2707	0/0:24,0:25:72.16:0,72,1706	0/0:30,0:30:87.30:0,87,2153	1/1:4,14:20:51.18:1870,51,0	1/1:9,17:32:72.25:2573,72,0	1/1:16,8:32:81.28:2731,81,0	1/1:2,15:25:54.19:2011,54,0	0/0:36,0:36:99:0,102,2555	0/0:13,0:13:36.10:0,36,871	0/0:30,0:30:87.27:0,87,2072	1/1:2,15:17:45.15:1666,45,0	1/1:5,19:26:72.25:2614,72,0	1/1:4,20:27:69.24:2566,69,0	0/0:35,0:35:62.45:0,62,2402	0/0:32,0:32:40.31:0,40,1256	1/1:5,11:19:42.14:1562,42,0	1/1:10,6:21:60.17:1815,60,0	1/1:1,14:21:51.17:1822,51,0	1/1:2,11:22:36.07:1181,36,0	1/1:8,15:27:69.24:2473,69,0	1/1:2,13:16:45.15:1559,45,0	1/1:6,14:25:45.15:1576,45,0	1/1:4,7:19:33.11:1074,33,0	0/0:28,0:28:84.28:0,84,2070	1/1:7,14:26:60.16:2133,60,0	0/0:12,0:12:33.09:0,33,688
chr10	102962447	.	CCTT	C	1232.92	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.646;DP=720;FS=8.970;HRun=0;HaplotypeScore=142.4158;InbreedingCoeff=0.9984;MQ=81.16;MQ0=0;MQRankSum=-0.255;QD=35.23;ReadPosRankSum=0.963;VQSLOD=4.4247;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,141,2976	0/0:12,0:12:26.77:0,27,618	0/0:27,0:27:76.66:0,77,1396	0/0:23,0:23:32.38:0,32,914	0/0:29,0:29:84.27:0,84,1890	0/0:22,0:22:57.16:0,57,1263	0/0:26,0:26:63.22:0,63,1415	0/0:28,0:27:81.27:0,81,1825	0/0:21,0:21:48.16:0,48,1075	0/0:27,0:27:80.95:0,81,1778	0/0:22,0:22:50.23:0,50,1352	0/0:37,0:37:99:0,108,2452	0/0:18,0:18:45.15:0,45,1018	0/0:27,0:27:75.18:0,75,1598	0/0:28,0:28:72.25:0,72,1658	0/0:29,0:29:87.21:0,87,1949	1/1:0,35:35:78.27:1328,78,0	0/0:20,0:20:57.17:0,57,1233	0/0:18,0:18:52.99:0,53,1140	0/0:20,0:20:41.82:0,42,805	0/0:22,0:22:51.18:0,51,1147	0/0:26,0:26:75.13:0,75,1560	0/0:19,0:19:51:0,51,945	0/0:33,0:33:87.29:0,87,1955	0/0:16,0:16:35.48:0,35,766	0/0:29,0:29:87.29:0,87,1962	0/0:33,0:33:93.25:0,93,1990	0/0:18,0:18:54.19:0,54,1245
chr10	102962851	.	A	AG	13651.42	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=18.359;DP=607;FS=9.414;HRun=1;HaplotypeScore=178.4565;InbreedingCoeff=0.9978;MQ=87.46;MQ0=0;MQRankSum=-15.465;QD=35.74;ReadPosRankSum=1.800;VQSLOD=3.2057;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:34:78.23:1089,78,0	1/1:2,5:7:18.06:254,18,0	0/0:22,0:22:62.78:0,63,764	0/0:32,0:32:83.39:0,83,1066	0/0:26,0:26:78.23:0,78,992	1/1:1,21:22:63.16:870,63,0	1/1:4,19:23:57.14:773,57,0	1/1:4,19:23:69.22:991,69,0	1/1:3,34:37:99:1469,105,0	0/0:15,0:15:43.68:0,44,526	0/0:10,0:10:26.92:0,27,325	0/0:23,0:23:69.22:0,69,894	1/1:6,18:24:60.09:764,60,0	1/1:3,23:26:72.16:987,72,0	1/1:2,22:24:69.23:1017,69,0	0/0:27,0:27:81.26:0,81,1050	0/0:33,0:33:99:0,99,1236	1/1:3,12:15:36.10:501,36,0	1/1:5,13:18:48.08:667,48,0	1/1:3,14:17:39.06:544,39,0	1/1:4,17:21:39.09:507,39,0	1/1:2,19:22:57.19:810,57,0	1/1:1,14:15:39.13:545,39,0	1/1:6,10:16:20.90:296,21,0	1/1:1,11:12:30.10:428,30,0	0/0:27,0:26:75.23:0,75,957	1/1:1,25:26:78.22:1139,78,0	0/0:10,0:10:30.08:0,30,373
chr10	102962885	.	TCA	T	10444.43	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=17.880;DP=512;FS=9.808;HRun=0;HaplotypeScore=147.1822;InbreedingCoeff=0.9815;MQ=88.58;MQ0=0;MQRankSum=-17.067;QD=34.70;ReadPosRankSum=-1.726;VQSLOD=5.3987;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:41.77:447,42,0	1/1:0,7:7:21.07:322,21,0	0/0:20,0:20:57.18:0,57,1063	0/0:30,0:30:87.22:0,87,1545	0/0:13,0:13:36.11:0,36,683	1/1:0,23:23:57.19:827,57,0	1/1:0,24:24:63.03:842,63,0	1/1:0,14:14:39.13:632,39,0	1/1:0,28:28:81.26:1269,81,0	0/0:17,0:17:48.16:0,48,925	0/0:12,0:12:36.11:0,36,694	0/0:30,0:30:90.27:0,90,1718	1/1:0,19:19:51.17:817,51,0	1/1:0,19:19:57.11:880,57,0	1/1:0,26:26:72.16:1133,72,0	0/0:21,0:21:63.22:0,63,1278	0/0:37,0:37:99:0,108,2148	1/1:0,18:18:39.06:602,39,0	1/1:1,16:17:44.98:622,45,0	1/1:1,10:11:23.90:265,24,0	1/1:0,16:16:23.60:262,24,0	1/1:0,15:15:26.72:268,27,0	1/1:0,4:4:6.02:77,6,0	1/1:0,14:14:17.95:283,18,0	1/1:0,9:9:23.99:297,24,0	0/0:19,0:19:54.19:0,54,1097	1/1:0,18:18:42:599,42,0	0/0:12,0:12:36.12:0,36,730
chr10	102963471	.	A	ATGAG	12062.70	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=3.500;DP=736;FS=0.000;HRun=0;HaplotypeScore=148.6636;InbreedingCoeff=0.9934;MQ=77.07;MQ0=4;MQRankSum=-4.748;QD=25.67;ReadPosRankSum=0.074;VQSLOD=4.2057;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:36.83:704,37,0	1/1:14,0:14:31.04:370,31,0	0/0:38,0:30:74.18:0,74,1154	0/0:45,0:35:62.32:0,62,1068	0/0:17,0:17:48.16:0,48,805	1/1:18,0:18:39.96:403,40,0	1/1:25,0:25:56:847,56,0	1/1:41,0:40:99:1670,105,0	1/1:30,0:30:62.77:628,63,0	0/0:23,0:23:54.18:0,54,925	0/0:13,0:13:36.12:0,36,587	0/0:24,0:24:60.20:0,60,963	1/1:31,0:31:69.53:670,70,0	1/1:24,0:24:56.69:601,57,0	1/1:33,0:33:21.07:440,21,0	0/0:29,0:29:26.26:0,26,1087	0/0:43,0:43:99:0,99,1465	1/1:31,0:31:73.36:1063,73,0	1/1:5,20:26:63.15:1090,63,0	1/1:4,7:13:24.08:407,24,0	1/1:10,29:39:24.08:597,24,0	1/1:21,0:21:41.99:504,42,0	1/1:15,0:15:23.60:248,24,0	1/1:35,0:35:55:894,55,0	1/1:25,0:25:59.71:623,60,0	0/0:23,0:23:60.20:0,60,969	1/1:3,14:18:12.04:304,12,0	0/0:11,0:11:27.08:0,27,418
chr10	102963480	.	T	TGAGTGATG	10233.79	PASS	AB=0.998;AC=23;AF=0.411;AN=56;BaseQRankSum=-5.356;DP=740;FS=2.594;HRun=0;HaplotypeScore=203.7292;InbreedingCoeff=0.0336;MQ=72.88;MQ0=18;MQRankSum=1.797;QD=22.10;ReadPosRankSum=4.666;VQSLOD=3.9030;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:34:53.03:666,0,53	0/1:12,0:14:74.17:300,0,74	0/0:47,0:27:74.18:0,74,1154	0/0:48,0:33:62.31:0,62,1068	0/0:20,0:20:57.17:0,57,1220	0/1:17,0:17:99:295,0,107	1/1:21,0:22:34.22:818,34,0	1/1:42,0:40:66.60:1625,67,0	0/1:25,0:25:99:470,0,176	0/0:24,0:24:66.22:0,66,1319	0/0:14,0:14:39.13:0,39,795	0/0:23,0:23:69.24:0,69,1323	0/1:29,0:29:99:499,0,194	0/1:25,0:25:99:468,0,157	1/1:2,32:35:21.07:793,21,0	0/0:29,0:29:35.29:0,35,1521	0/0:22,0:38:99:0,99,1800	1/1:30,0:30:10.59:1014,11,0	1/1:26,0:25:40.76:833,41,0	0/1:14,0:14:97.41:257,0,97	0/1:34,0:35:98.43:196,0,98	0/1:20,0:20:72.85:420,0,73	0/1:13,0:15:87.53:195,0,88	0/1:35,0:35:22.07:812,0,22	0/1:28,0:27:99:471,0,201	0/0:25,0:25:72.15:0,72,1282	0/1:17,0:17:70.35:102,0,70	0/0:8,0:9:27.09:0,27,658
chr10	102963482	.	AT	A	1039.83	PASS	AB=0.907;AC=22;AF=0.393;AN=56;BaseQRankSum=14.733;DP=740;FS=5.116;HRun=1;HaplotypeScore=149.9681;InbreedingCoeff=0.5538;MQ=71.11;MQ0=22;MQRankSum=-4.358;QD=2.86;ReadPosRankSum=1.600;VQSLOD=0.0532;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,8:33:14.01:55,0,14	1/1:9,5:14:15.44:70,15,0	0/0:45,0:26:75.03:0,75,1099	0/0:47,0:31:87.28:0,87,1285	0/0:20,0:20:57.19:0,57,900	1/1:9,8:17:27.04:115,27,0	0/1:21,2:23:6.14:77,0,6	0/1:42,0:39:63.51:64,0,260	1/1:14,12:26:12.26:108,12,0	0/0:24,0:24:66.22:0,66,1038	0/0:14,0:14:42.14:0,42,656	0/0:23,0:23:69.23:0,69,1083	1/1:13,16:29:45.20:195,45,0	1/1:14,11:25:19.70:134,20,0	0/0:34,0:34:26.39:0,26,195	0/0:28,0:28:80.73:0,81,1246	0/0:37,0:37:85:0,85,1004	0/1:28,2:30:1.96:78,0,2	0/1:28,0:25:19.08:19,0,291	0/0:15,0:15:33.26:0,33,299	0/0:35,0:35:38.70:0,39,371	1/1:11,8:19:8.32:68,8,0	1/1:7,7:14:2.63:36,3,0	0/1:25,10:35:65.84:66,0,71	1/1:14,14:28:28.25:155,28,0	0/0:28,0:28:84.16:0,84,1203	0/0:17,0:17:17.92:0,18,179	0/0:9,0:9:25.90:0,26,385
chr10	102963487	.	TG	T	609.18	PASS	AB=0.729;AC=11;AF=0.196;AN=56;BaseQRankSum=14.230;DP=747;FS=3.384;HRun=2;HaplotypeScore=149.9518;InbreedingCoeff=-0.2481;MQ=62.48;MQ0=26;MQRankSum=-10.973;QD=2.21;ReadPosRankSum=1.680;VQSLOD=-0.2070;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,8:33:27.61:28,0,246	0/1:8,5:13:20.63:21,0,141	0/0:46,0:20:60.11:0,60,821	0/0:45,0:24:60.20:0,60,869	0/0:22,0:22:63.21:0,63,928	0/1:11,8:19:88.30:88,0,143	0/0:18,2:20:8.05:0,8,356	0/0:43,0:40:99:0,120,1231	0/1:14,12:26:85.07:85,0,251	0/0:25,0:25:72.23:0,72,1024	0/0:14,0:14:42.13:0,42,600	0/0:24,0:24:69.22:0,69,995	0/1:14,16:30:99:123,0,205	0/1:15,11:26:99:110,0,252	0/0:36,0:36:39.13:0,39,568	0/0:27,0:27:81.27:0,81,1177	0/0:34,0:34:69.13:0,69,815	0/1:30,2:32:30.79:31,0,514	0/0:28,0:24:72.16:0,72,941	0/0:15,0:15:39.13:0,39,548	0/0:36,0:36:42.13:0,42,608	0/1:10,8:18:33.68:34,0,209	0/1:6,7:13:29.29:29,0,62	0/1:25,10:35:43.15:43,0,469	0/1:17,14:31:99:167,0,233	0/0:28,0:28:81.26:0,81,1171	0/0:18,0:18:21.06:0,21,295	0/0:10,0:10:28.32:0,28,385
chr10	102963874	.	T	TAGC	22108.04	PASS	AB=0.955;AC=37;AF=0.661;AN=56;BaseQRankSum=-2.939;DP=633;FS=1.424;HRun=0;HaplotypeScore=91.4203;InbreedingCoeff=0.9195;MQ=82.81;MQ0=0;MQRankSum=-5.519;QD=50.36;ReadPosRankSum=4.062;VQSLOD=7.1114;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:45:90.27:2151,90,0	1/1:0,5:5:12.04:295,12,0	0/0:25,0:25:54.73:0,55,1165	0/0:14,0:14:39.07:0,39,657	0/0:30,0:30:90.29:0,90,1637	1/1:0,17:18:45.15:1104,45,0	1/1:0,28:33:66.23:1623,66,0	1/1:0,16:21:57.05:1128,57,0	1/1:0,27:28:72.25:1766,72,0	0/0:28,0:28:84.29:0,84,1545	0/0:16,0:16:48.16:0,48,893	0/0:26,0:26:78.23:0,78,1358	1/1:0,14:16:36.12:870,36,0	1/1:0,28:29:69.24:1679,69,0	1/1:1,19:21:57.20:1390,57,0	0/1:20,1:21:10.39:10,0,1024	0/0:27,0:27:75.21:0,75,1329	1/1:0,22:22:60.21:1475,60,0	1/1:0,20:23:69.10:1426,69,0	1/1:0,8:10:15.05:370,15,0	1/1:1,44:49:71.23:1751,71,0	1/1:0,17:17:39.13:956,39,0	1/1:0,11:12:21.07:514,21,0	1/1:0,18:19:39.13:958,39,0	1/1:0,27:28:63.22:1543,63,0	0/0:18,0:18:51.17:0,51,936	1/1:2,19:22:45.15:1100,45,0	0/0:10,0:10:30.10:0,30,545
chr10	102964452	.	TAC	T	14298.73	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=12.638;DP=776;FS=15.180;HRun=0;HaplotypeScore=102.6425;InbreedingCoeff=0.9930;MQ=58.68;MQ0=11;MQRankSum=2.090;QD=27.50;ReadPosRankSum=2.538;VQSLOD=5.6636;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,30:34:63.20:802,63,0	1/1:0,15:15:42.13:534,42,0	0/0:25,0:5:12.04:0,12,178	0/0:28,0:16:28.64:0,29,377	0/0:23,0:24:63.22:0,63,1054	1/1:5,24:29:60.19:764,60,0	1/1:9,23:32:60.19:764,60,0	1/1:7,23:30:69.15:849,69,0	1/1:3,25:28:66.21:840,66,0	0/0:46,0:45:99:0,132,2174	0/0:18,0:18:45.14:0,45,718	0/0:33,0:33:75.26:0,75,1251	1/1:1,23:24:54.17:687,54,0	1/1:1,29:30:69.22:878,69,0	1/1:5,29:34:69.22:878,69,0	0/0:18,0:18:48.16:0,48,803	0/0:25,1:26:16:0,16,815	1/1:1,20:21:45.14:572,45,0	1/1:11,14:22:28.86:511,29,0	1/1:1,26:27:72.23:916,72,0	1/1:5,40:45:99:1336,105,0	1/1:1,20:21:51.16:649,51,0	1/1:2,21:23:45.14:573,45,0	1/1:2,30:32:72.23:916,72,0	1/1:3,32:35:84.27:1069,84,0	0/0:27,0:27:72.24:0,72,1159	1/1:4,29:33:60.19:760,60,0	0/0:10,0:10:24.08:0,24,402
chr10	102964611	.	CGT	C	125.13	PASS	AB=0.945;AC=10;AF=0.192;AN=52;BaseQRankSum=0.133;DP=570;FS=6.938;HRun=0;HaplotypeScore=96.5552;InbreedingCoeff=-0.0636;MQ=66.15;MQ0=12;MQRankSum=0.660;QD=0.78;ReadPosRankSum=2.413;VQSLOD=1.2443;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:41.73:0,42,450	0/0:3,0:3:2.99:0,3,24	./.	./.	0/0:15,0:15:21.04:0,21,270	0/0:17,0:17:24.05:0,24,267	0/0:16,0:16:8.98:0,9,89	0/0:32,0:31:18.72:0,19,125	0/0:17,0:17:24.52:0,25,281	0/0:23,0:23:21.07:0,21,292	0/1:18,0:18:7.73:8,0,94	1/1:20,0:19:5.60:37,6,0	0/1:13,2:15:44.72:45,0,113	0/1:19,0:19:21.97:22,0,204	0/0:31,0:31:17.93:0,18,144	0/1:13,0:13:9.50:10,0,203	0/0:19,0:24:9:0,9,78	0/0:24,1:24:44.94:0,45,459	0/0:20,0:20:17.92:0,18,148	0/0:23,0:23:14.99:0,15,129	0/0:12,0:15:2.85:0,3,23	0/1:16,1:17:49.61:50,0,91	0/1:16,4:20:46.78:47,0,116	0/1:16,0:16:3.81:4,0,183	0/1:21,1:22:37.71:38,0,203	0/0:18,0:18:12.08:0,12,171	0/0:15,0:15:11.80:0,12,108	0/0:16,0:16:9.03:0,9,133
chr10	102964652	.	G	GTGTGTGTA	5468.18	PASS	AB=0.993;AC=26;AF=0.464;AN=56;BaseQRankSum=-6.759;DP=547;FS=10.267;HRun=0;HaplotypeScore=155.7248;InbreedingCoeff=0.1036;MQ=57.65;MQ0=9;MQRankSum=0.239;QD=13.88;ReadPosRankSum=-1.745;VQSLOD=2.5044;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:40:99:399,0,377	1/1:3,0:3:8.96:97,9,0	0/0:20,0:11:25.58:0,26,237	0/0:27,0:10:29.91:0,30,274	0/0:13,0:13:3.23:0,3,343	0/1:15,0:16:99:155,0,269	0/1:16,0:16:16.88:191,0,17	1/1:33,0:31:81.13:670,81,0	0/1:24,0:24:99:252,0,325	0/0:21,0:21:44.50:0,44,502	0/0:17,0:17:31.22:0,31,319	0/0:13,0:13:17.77:0,18,152	0/1:11,0:11:44.42:44,0,200	0/1:19,0:19:99:121,0,193	1/1:11,2:28:17.96:493,18,0	0/0:15,0:15:40.60:0,41,551	0/1:20,0:19:70.38:72,0,70	0/1:30,0:29:99:242,0,452	1/1:18,0:17:32.41:421,32,0	1/1:28,2:30:62.81:884,63,0	1/1:15,0:16:17.87:196,18,0	0/1:18,0:18:99:176,0,155	0/1:18,0:18:99:133,0,228	0/1:18,0:17:99:180,0,198	0/1:22,0:20:99:209,0,144	0/0:20,0:20:40.93:0,41,386	1/1:4,9:13:18.27:531,18,0	0/0:7,0:7:17.83:0,18,320
chr10	102965230	.	GGT	G	14707.79	PASS	AB=0.917;AC=37;AF=0.661;AN=56;BaseQRankSum=13.541;DP=806;FS=1.410;HRun=0;HaplotypeScore=111.4874;InbreedingCoeff=0.9256;MQ=67.08;MQ0=1;MQRankSum=-0.713;QD=26.55;ReadPosRankSum=1.558;VQSLOD=5.6283;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,49:58:99:1562,126,0	1/1:5,9:14:27.08:334,27,0	0/0:34,0:25:51.84:0,52,698	0/0:26,0:20:37.02:0,37,549	0/0:27,2:29:29.06:0,29,991	1/1:6,23:29:22.35:737,22,0	1/1:5,32:37:55.25:839,55,0	1/1:10,24:34:69.22:855,69,0	1/1:6,17:23:57.18:707,57,0	0/0:29,0:29:66.22:0,66,1048	0/1:10,1:11:10.08:10,0,357	0/0:28,0:28:81.26:0,81,1302	1/1:4,22:26:63.20:781,63,0	1/1:2,18:20:57.18:707,57,0	1/1:10,32:42:95.81:1189,96,0	0/0:33,2:35:47.09:0,47,1291	0/0:30,0:30:78.27:0,78,1270	1/1:4,21:27:47.81:549,48,0	1/1:8,16:24:48.15:594,48,0	1/1:8,23:31:69.11:834,69,0	1/1:7,37:44:99:1227,99,0	1/1:3,28:31:78.25:967,78,0	1/1:3,14:18:32.94:386,33,0	1/1:4,27:32:78.08:944,78,0	1/1:6,19:25:51.16:632,51,0	0/0:27,0:27:66.23:0,66,1074	1/1:4,24:28:69.22:855,69,0	0/0:14,0:14:18.06:0,18,295
chr10	102966882	.	TGTTTGTTTGTTTGTTA	T	6502.18	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=3.044;DP=757;FS=0.493;HRun=0;HaplotypeScore=336.9123;InbreedingCoeff=0.9779;MQ=59.73;MQ0=2;MQRankSum=-7.833;QD=49.63;ReadPosRankSum=-0.462;VQSLOD=3.0591;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:84.25:0,84,3072	0/0:17,0:17:28.81:0,29,825	0/0:24,0:22:51.18:0,51,2767	0/0:25,0:23:18.19:0,18,2024	0/0:24,0:24:66.21:0,66,4586	0/0:26,0:26:57.20:0,57,2216	0/0:23,0:23:54.18:0,54,1988	1/1:14,0:14:9.01:155,9,0	0/0:25,0:25:33.11:0,33,1233	0/0:34,0:34:87.30:0,87,5800	0/0:22,0:22:60.20:0,60,3988	0/0:28,0:28:78.27:0,78,5503	0/0:31,0:31:56.76:0,57,2045	0/0:25,0:25:63.22:0,63,2454	1/1:8,24:31:36.12:1626,36,0	0/0:34,0:34:93.32:0,93,6214	0/0:20,0:20:18.95:0,19,386	0/0:26,0:26:36.12:0,36,1445	1/1:6,8:12:24.01:400,24,0	1/1:8,19:27:44.51:1477,45,0	1/1:9,2:11:12.02:405,12,0	0/0:34,0:34:36.21:0,36,2637	0/0:29,0:29:63.28:0,63,2336	0/0:44,0:44:81.28:0,81,3178	0/0:32,0:32:84.29:0,84,4908	0/0:46,0:46:99:0,123,7927	1/1:8,25:33:54.19:2440,54,0	0/0:12,0:11:27.09:0,27,1767
chr10	102966890	.	TGTTTGTTA	T	3553.08	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=6.682;DP=749;FS=3.601;HRun=0;HaplotypeScore=231.2415;InbreedingCoeff=0.7046;MQ=58.72;MQ0=2;MQRankSum=-7.886;QD=14.04;ReadPosRankSum=-5.476;VQSLOD=1.4422;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:26.46:0,26,316	0/1:16,0:16:2.61:3,0,59	0/0:26,0:24:63.12:0,63,1536	0/0:24,0:22:25.45:0,25,1034	0/0:23,0:23:66.20:0,66,2536	0/0:26,0:26:51.75:0,52,274	0/1:21,0:21:81.93:82,0,245	1/1:19,0:19:23.86:194,24,0	0/0:21,0:21:28.83:0,29,156	0/0:32,0:32:96.28:0,96,3126	0/0:21,0:21:60.16:0,60,2146	0/0:27,0:27:81.24:0,81,2911	0/0:33,0:33:45.64:0,46,247	0/0:27,0:27:57.47:0,57,304	1/1:28,0:26:36.12:701,36,0	0/0:33,0:33:96.24:0,96,3251	1/1:2,18:20:12.43:205,12,0	0/0:27,0:27:30.31:0,30,177	1/1:13,0:11:20.81:203,21,0	1/1:25,0:25:44.95:687,45,0	1/1:18,0:17:32.28:296,32,0	0/1:34,0:34:99:122,0,232	0/0:29,0:29:53.11:0,53,328	0/0:48,0:48:58.02:0,58,387	0/1:31,0:31:6.55:7,0,1966	0/0:46,0:46:99:0,126,4246	1/1:28,0:28:54.19:1053,54,0	0/0:11,0:10:24.08:0,24,957
chr10	102966894	.	TGTTA	T	12657.54	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=12.818;DP=734;FS=5.753;HRun=0;HaplotypeScore=146.3780;InbreedingCoeff=0.9097;MQ=59.58;MQ0=2;MQRankSum=-2.961;QD=26.37;ReadPosRankSum=4.266;VQSLOD=4.1251;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,38:42:78.22:1407,78,0	1/1:2,11:13:19.18:306,19,0	0/0:29,0:27:70.75:0,71,1092	0/0:25,0:23:31.11:0,31,726	0/0:23,0:23:66.18:0,66,1526	1/1:1,28:29:54.19:1021,54,0	1/1:13,10:23:65.85:831,66,0	1/1:12,0:13:11.52:228,12,0	1/1:2,18:20:30.10:550,30,0	0/0:33,0:33:99:0,99,1944	0/0:22,0:22:63.13:0,63,1314	0/0:28,0:28:84.19:0,84,1785	1/1:3,28:31:48.16:903,48,0	1/1:1,24:25:60.21:1134,60,0	1/1:25,0:23:36.07:366,36,0	0/0:34,0:34:99:0,102,1972	1/1:20,0:20:12.85:110,13,0	1/1:1,26:27:39.03:696,39,0	1/1:9,0:8:20.78:175,21,0	1/1:19,0:20:44.91:407,45,0	1/1:17,0:16:42.05:317,42,0	1/1:2,30:32:86.50:1115,87,0	1/1:1,29:30:56.78:1026,57,0	1/1:1,47:48:78.13:1397,78,0	0/1:31,0:31:99:119,0,815	0/0:47,0:47:99:0,132,2653	1/1:25,0:25:54.12:550,54,0	0/0:13,0:12:33.04:0,33,639
chr10	102967678	.	A	ATGTG	4874.58	PASS	AB=0.983;AC=38;AF=0.679;AN=56;BaseQRankSum=5.663;DP=732;FS=2.338;HRun=0;HaplotypeScore=209.1430;InbreedingCoeff=0.7630;MQ=56.64;MQ0=3;MQRankSum=-5.853;QD=9.60;ReadPosRankSum=-2.365;VQSLOD=3.7982;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:34:0.16:0,0,0	1/1:6,0:6:3.01:52,3,0	0/0:25,0:19:1.21:0,1,163	0/0:29,0:19:8.61:0,9,89	0/0:21,0:23:13.10:0,13,341	1/1:28,0:27:8.07:72,8,0	1/1:29,0:27:18.06:289,18,0	1/1:36,2:38:51.03:633,51,0	1/1:16,0:17:15.05:235,15,0	0/1:26,0:29:1.45:1,0,424	0/0:25,0:25:30.09:0,30,460	0/0:29,0:30:30.11:0,30,626	1/1:22,0:22:12.75:132,13,0	1/1:28,0:29:8.88:110,9,0	1/1:26,0:29:21.05:336,21,0	0/0:29,0:30:48.13:0,48,699	1/1:19,0:22:9.63:376,10,0	1/1:16,0:16:12.04:193,12,0	1/1:21,3:23:23.26:333,23,0	1/1:11,0:12:18.05:262,18,0	1/1:41,2:44:33.47:552,33,0	1/1:29,0:29:18.02:217,18,0	1/1:33,0:33:15.03:210,15,0	1/1:21,0:22:5.81:53,6,0	1/1:20,0:21:9.02:117,9,0	0/0:34,0:34:5.88:0,6,342	1/1:13,2:19:42.13:701,42,0	0/0:28,0:28:48.15:0,48,747
chr10	102967726	.	T	TTG	11830.60	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=2.788;DP=600;FS=1.169;HRun=0;HaplotypeScore=148.7630;InbreedingCoeff=0.9615;MQ=60.85;MQ0=1;MQRankSum=-8.487;QD=31.13;ReadPosRankSum=-2.084;VQSLOD=6.0035;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,16:28:53.18:800,53,0	1/1:1,2:4:7.26:140,7,0	0/0:28,0:24:4.42:0,4,368	0/0:30,0:23:18.25:0,18,410	0/0:18,0:18:48.14:0,48,595	1/1:4,10:14:30.10:498,30,0	1/1:6,11:17:38.90:586,39,0	1/1:8,27:35:81.25:1307,81,0	1/1:9,8:17:29.87:439,30,0	0/0:29,0:29:69.19:0,69,818	0/0:16,0:16:36.09:0,36,432	0/0:29,0:29:75.20:0,75,895	1/1:7,8:15:28.93:470,29,0	1/1:6,14:20:53.82:776,54,0	1/1:2,26:28:66.22:1075,66,0	0/0:30,0:30:81.23:0,81,983	1/1:8,10:18:20.44:373,20,0	1/1:4,8:12:29.98:437,30,0	1/1:5,23:28:65.93:1006,66,0	1/1:2,13:16:32.96:484,33,0	1/1:10,25:38:57.10:916,57,0	1/1:9,7:16:31.35:459,31,0	1/1:4,14:19:45.07:710,45,0	1/1:10,11:21:18.53:300,19,0	1/1:5,7:12:29.91:406,30,0	0/0:23,0:23:57.17:0,57,702	1/1:5,17:22:39.13:649,39,0	0/0:17,0:17:39.12:0,39,492
chr10	102967762	.	T	TTG	8129.43	PASS	AB=0.707;AC=23;AF=0.411;AN=56;BaseQRankSum=-1.043;DP=723;FS=19.033;HRun=0;HaplotypeScore=140.9223;InbreedingCoeff=0.8975;MQ=57.84;MQ0=11;MQRankSum=-3.428;QD=30.22;ReadPosRankSum=-1.084;VQSLOD=4.6036;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,12:29:17.94:703,0,18	1/1:0,8:7:21.07:347,21,0	0/0:42,0:23:42.51:0,43,494	0/0:45,0:21:31.65:0,32,331	0/0:19,0:19:39.11:0,39,474	1/1:2,17:20:36.11:558,36,0	1/1:6,24:30:16.63:765,17,0	0/0:30,0:30:48.15:0,48,597	1/1:6,15:24:13.79:745,14,0	0/0:28,0:28:60.19:0,60,739	0/0:19,0:19:51.16:0,51,637	0/0:28,0:28:72.22:0,72,886	1/1:3,16:19:42.14:691,42,0	1/1:7,23:30:60.20:972,60,0	0/0:31,0:31:81.23:0,81,996	0/0:35,0:35:84.22:0,84,1018	0/0:4,0:22:23.18:0,23,143	1/1:7,15:22:33.11:532,33,0	0/0:19,0:19:45.13:0,45,547	0/0:19,0:19:39.12:0,39,488	0/0:54,0:56:83.48:0,83,901	1/1:6,13:19:48.16:770,48,0	1/1:4,12:16:39.10:525,39,0	1/1:12,16:28:57.66:893,58,0	1/1:4,16:21:39.13:629,39,0	0/0:32,0:32:81.24:0,81,999	0/0:17,0:17:30.10:0,30,373	0/0:10,0:10:3.01:0,3,38
chr10	102967877	.	ATG	A	3512.81	PASS	AB=0.894;AC=28;AF=0.519;AN=54;BaseQRankSum=5.493;DP=820;FS=0.438;HRun=0;HaplotypeScore=150.5539;InbreedingCoeff=0.4034;MQ=52.19;MQ0=19;MQRankSum=-0.282;QD=7.49;ReadPosRankSum=3.146;VQSLOD=3.4972;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,23:37:50.48:518,50,0	0/1:6,9:15:5.14:122,0,5	./.	0/0:30,0:14:6:0,6,56	0/1:39,1:41:19.85:20,0,748	1/1:23,8:31:36.08:392,36,0	1/1:13,17:31:9.18:151,9,0	0/0:46,0:45:15.69:0,16,66	1/1:8,15:22:30.09:342,30,0	0/0:36,0:35:37.36:0,37,716	0/0:12,0:12:21.07:0,21,317	0/0:34,0:34:51.09:0,51,686	1/1:12,8:20:18.05:203,18,0	1/1:3,13:17:20.89:219,21,0	1/1:34,0:32:2.18:15,2,0	0/1:36,3:40:80.95:81,0,841	0/0:20,0:20:22.18:0,22,196	0/1:16,4:20:38.30:254,0,38	0/0:30,0:27:0.07:0,0,55	0/0:31,0:26:1.61:0,2,41	0/0:47,0:40:1.24:0,1,3	1/1:13,15:29:19.82:243,20,0	1/1:10,17:28:24.61:253,25,0	1/1:12,27:39:3.26:448,3,0	1/1:7,14:22:4.56:238,5,0	0/0:35,0:35:68.85:0,69,915	0/1:27,0:26:6.27:6,0,68	0/1:13,0:13:8.76:9,0,196
chr10	102967884	.	T	TGAGAG	3062.85	PASS	AB=0.819;AC=5;AF=0.089;AN=56;BaseQRankSum=-2.466;DP=813;FS=3.150;HRun=0;HaplotypeScore=191.7243;InbreedingCoeff=-0.0983;MQ=51.33;MQ0=21;MQRankSum=-4.785;QD=17.11;ReadPosRankSum=-2.182;VQSLOD=3.1837;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:81.25:0,81,1305	0/0:15,0:15:24.78:0,25,367	0/0:30,0:13:33.09:0,33,570	0/0:28,0:12:30.09:0,30,562	0/0:38,0:38:99:0,99,2066	0/0:27,0:27:51.11:0,51,784	0/0:34,0:34:49.37:0,49,983	0/1:29,13:44:99:834,0,803	0/0:25,0:24:45.59:0,46,662	0/0:38,0:37:99:0,108,2333	0/0:10,0:10:27.09:0,27,599	0/0:32,0:32:79.33:0,79,1728	0/0:17,0:17:30.08:0,30,434	0/0:18,0:18:24.08:0,24,370	0/1:29,3:30:99:346,0,634	0/0:39,0:39:99:0,105,2193	0/0:21,0:21:34.79:0,35,579	0/0:19,0:19:54.18:0,54,1007	0/1:17,10:27:99:1003,0,578	0/0:28,1:24:36.11:0,36,653	0/1:45,4:41:99:226,0,257	0/0:31,0:30:57.06:0,57,1037	0/0:29,0:29:38.57:0,39,634	0/0:42,0:41:73.46:0,73,1179	0/0:20,0:20:33.10:0,33,484	0/0:34,0:34:93.31:0,93,2019	0/1:18,5:22:99:771,0,301	0/0:17,0:17:39.13:0,39,834
chr10	102968505	.	A	AC	5611.28	PASS	AB=0.568;AC=21;AF=0.375;AN=56;BaseQRankSum=-14.328;DP=687;FS=1.109;HRun=8;HaplotypeScore=100.9942;InbreedingCoeff=0.7724;MQ=70.93;MQ0=2;MQRankSum=-0.256;QD=20.78;ReadPosRankSum=1.327;VQSLOD=4.6279;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,23:31:45.13:516,45,0	1/1:1,10:11:30.09:346,30,0	0/0:24,1:19:40.46:0,40,348	0/0:24,0:21:12.24:0,12,239	0/0:26,0:26:63.02:0,63,576	0/1:2,10:12:6.41:187,0,6	1/1:5,27:32:57.17:657,57,0	0/0:6,0:29:47.96:0,48,193	1/1:4,19:23:45.13:519,45,0	0/0:24,0:24:66.04:0,66,604	0/0:23,0:23:60.03:0,60,548	0/0:18,0:18:48:0,48,430	0/1:7,23:30:28.03:465,0,28	1/1:6,23:29:25.88:589,26,0	0/0:3,0:23:36.67:0,37,108	0/0:31,0:31:86.92:0,87,783	0/0:3,0:28:43.83:0,44,131	1/1:3,20:23:20.68:492,21,0	0/0:2,0:25:32.12:0,32,124	0/0:3,0:28:44.59:0,45,131	0/0:1,0:46:71.30:0,71,210	0/1:6,13:19:24.09:247,0,24	1/1:3,11:14:8.87:342,9,0	1/1:2,29:31:53.80:870,54,0	1/1:1,14:15:33.10:381,33,0	0/0:30,0:30:72.01:0,72,658	0/0:0,0:25:44.62:0,45,132	0/0:10,0:10:30.02:0,30,275
chr10	102969939	.	ATGTGTG	A	413.72	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.399;DP=687;FS=4.713;HRun=0;HaplotypeScore=157.0665;InbreedingCoeff=0.9903;MQ=75.53;MQ0=11;MQRankSum=-4.062;QD=19.70;ReadPosRankSum=-1.397;VQSLOD=3.0660;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:72.25:0,72,2444	0/0:10,0:10:21.07:0,21,732	0/0:43,0:23:27.15:0,27,953	0/0:39,0:23:35.97:0,36,992	0/0:16,0:16:45.15:0,45,1492	0/0:20,0:19:41.17:0,41,1297	0/0:42,0:42:99:0,108,3630	0/0:24,0:24:39.13:0,39,1081	0/0:26,0:26:63.22:0,63,2108	0/0:24,0:24:60.10:0,60,1965	0/0:22,0:22:57.15:0,57,1861	0/0:21,0:22:63.22:0,63,2122	0/0:22,0:22:54.66:0,55,1840	0/0:20,0:19:39.12:0,39,1236	0/0:38,0:38:90.24:0,90,2916	0/0:31,0:31:81.28:0,81,2814	1/1:5,16:21:27.56:508,28,0	0/0:20,0:20:48.16:0,48,1600	0/0:19,0:20:48.15:0,48,1445	0/0:10,0:10:24.08:0,24,837	0/0:23,0:22:48.64:0,49,1588	0/0:24,0:24:69.24:0,69,2353	0/0:12,0:11:26.70:0,27,924	0/0:44,0:44:99:0,115,3908	0/0:17,0:16:33.11:0,33,1141	0/0:23,0:23:66.23:0,66,2250	0/0:23,0:22:55.13:0,55,1706	0/0:14,0:14:36.12:0,36,1253
chr10	102971160	.	GC	G	3429.55	PASS	AB=0.869;AC=44;AF=0.786;AN=56;BaseQRankSum=2.452;DP=477;FS=2.249;HRun=12;HaplotypeScore=62.3594;InbreedingCoeff=0.2617;MQ=83.46;MQ0=1;MQRankSum=-0.399;QD=7.85;ReadPosRankSum=3.103;VQSLOD=2.4352;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,17:33:24:155,24,0	1/1:3,4:7:4.14:43,4,0	0/1:26,1:20:20.42:20,0,67	0/1:18,1:15:36.54:37,0,57	0/1:12,3:15:27.37:27,0,55	1/1:3,8:14:24.01:157,24,0	1/1:8,17:30:54.68:377,55,0	1/1:6,9:16:22.80:160,23,0	1/1:7,11:19:19.94:145,20,0	0/0:17,1:18:1.77:0,2,177	0/1:6,4:10:28.68:29,0,67	0/0:10,0:11:8.90:0,9,69	1/1:3,9:15:27.01:180,27,0	1/1:5,17:23:28.91:215,29,0	1/1:10,10:20:22.92:169,23,0	0/1:8,4:12:28.50:28,0,87	1/1:3,0:24:39.47:114,39,0	1/1:1,11:13:28.93:215,29,0	1/1:2,9:14:28.59:200,29,0	1/1:9,8:17:19.93:143,20,0	1/1:8,17:26:36.87:270,37,0	1/1:3,13:18:30.95:219,31,0	1/1:3,4:8:7.99:52,8,0	1/1:6,12:19:31.90:238,32,0	1/1:3,11:14:9.80:71,10,0	0/0:11,0:11:11.96:0,12,109	1/1:6,8:17:24.49:156,24,0	0/1:7,0:7:9.01:9,0,72
chr10	102972406	.	C	CGT	11739.85	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=10.263;DP=872;FS=1.349;HRun=0;HaplotypeScore=265.5473;InbreedingCoeff=0.8958;MQ=53.64;MQ0=6;MQRankSum=1.900;QD=19.34;ReadPosRankSum=3.102;VQSLOD=4.9236;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:55,0:54:70.98:352,71,0	1/1:17,0:17:25.56:163,26,0	0/0:30,0:14:18.03:0,18,185	0/0:30,0:15:23.28:0,23,251	0/0:27,0:27:75.18:0,75,1081	1/1:17,0:17:9.04:89,9,0	1/1:34,0:34:32.56:283,33,0	1/1:4,27:31:93.25:1489,93,0	1/1:26,0:26:12.78:177,13,0	0/0:39,0:39:99:0,105,1533	0/0:25,0:25:69.08:0,69,914	0/0:36,0:36:86.52:0,87,1196	1/1:26,0:26:10.47:272,10,0	1/1:36,0:35:37.14:292,37,0	1/1:13,18:31:49.75:958,50,0	0/0:32,0:32:70.02:0,70,1120	0/1:23,0:23:11.46:11,0,68	1/1:14,1:15:33.36:158,33,0	1/1:8,4:12:30:431,30,0	1/1:12,15:27:63.19:1119,63,0	1/1:41,58:99:99:3567,203,0	1/1:35,0:35:62.01:476,62,0	1/1:23,0:23:39.56:312,40,0	1/1:39,0:39:69.40:381,69,0	1/1:44,0:44:83.42:646,83,0	0/0:43,0:43:99:0,111,1633	1/1:8,9:17:36.02:563,36,0	0/0:3,0:3:8.98:0,9,108
chr10	102972425	.	GT	G	177.19	PASS	AB=0.750;AC=1;AF=0.018;AN=56;BaseQRankSum=0.786;DP=935;FS=0.000;HRun=2;HaplotypeScore=277.8330;InbreedingCoeff=-0.0188;MQ=54.18;MQ0=16;MQRankSum=-2.836;QD=7.38;ReadPosRankSum=-0.159;VQSLOD=0.4301;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,1:57:99:0,108,1468	0/0:15,0:15:36.09:0,36,495	0/0:42,1:16:25.30:0,25,474	0/0:44,0:20:44.98:0,45,557	0/0:30,0:30:84.17:0,84,1146	0/0:19,0:19:48.11:0,48,678	0/0:41,0:41:99:0,101,1233	0/0:37,0:37:88.06:0,88,1176	0/0:27,0:27:75.06:0,75,999	0/0:41,0:41:99:0,120,1698	0/0:25,0:25:52.15:0,52,786	0/0:32,0:32:84.56:0,85,1087	0/0:26,0:26:76.33:0,76,941	0/0:40,0:39:80.63:0,81,1117	0/0:29,0:29:66.05:0,66,799	0/0:30,0:29:86.07:0,86,1209	0/1:16,8:24:99:252,0,239	0/0:20,0:20:54.13:0,54,722	0/0:15,0:15:42.14:0,42,564	0/0:25,0:25:62.32:0,62,845	0/0:99,0:99:99:0,234,2988	0/0:37,0:37:77.52:0,78,973	0/0:23,0:23:53.44:0,53,658	0/0:45,0:45:98.35:0,98,1233	0/0:40,0:40:72.80:0,73,922	0/0:50,0:50:99:0,119,1957	0/0:14,1:15:35.95:0,36,406	0/0:5,0:5:14.99:0,15,178
chr10	102972502	.	T	TG	26390.24	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-15.837;DP=1049;FS=0.502;HRun=1;HaplotypeScore=177.3009;InbreedingCoeff=0.9999;MQ=60.81;MQ0=0;MQRankSum=-1.044;QD=38.81;ReadPosRankSum=3.004;VQSLOD=4.3909;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,57:61:99:1796,116,0	1/1:1,26:27:78.20:1208,78,0	0/0:44,0:42:82.82:0,83,1511	0/0:45,0:44:99:0,101,1554	0/0:32,0:32:69.20:0,69,931	1/1:0,26:26:75.19:1169,75,0	1/1:2,37:39:69.02:1104,69,0	1/1:1,42:43:99:1899,126,0	1/1:1,32:33:96.22:1502,96,0	0/0:66,0:66:99:0,196,2706	0/0:22,0:22:44.77:0,45,630	0/0:48,0:48:99:0,144,1915	1/1:0,34:34:99:1534,99,0	1/1:1,35:36:90.31:1429,90,0	1/1:0,29:29:78.20:1216,78,0	0/0:43,0:42:99:0,126,1760	1/1:0,26:26:63.21:998,63,0	1/1:2,20:22:61.76:957,62,0	1/1:1,17:18:51.17:809,51,0	1/1:0,32:32:84.29:1344,84,0	1/1:11,82:93:99:3492,225,0	1/1:0,35:35:80.46:1294,80,0	1/1:0,26:26:60.20:956,60,0	1/1:2,44:46:99:1813,114,0	1/1:0,33:33:75.26:1199,75,0	0/0:59,0:59:99:0,175,2380	1/1:0,21:21:42.14:670,42,0	0/0:10,0:10:30.07:0,30,399
chr10	102973843	.	G	GTGTGTGTGTGTGTGTA	7382.14	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=3.114;DP=577;FS=1.490;HRun=0;HaplotypeScore=243.4076;InbreedingCoeff=0.9879;MQ=69.72;MQ0=1;MQRankSum=-8.404;QD=53.88;ReadPosRankSum=-3.722;VQSLOD=3.6559;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,4843	0/0:7,0:7:21.05:0,21,783	0/0:19,0:16:44.50:0,44,921	0/0:28,0:26:60.01:0,60,1704	0/0:19,0:19:54.16:0,54,2180	0/0:20,0:20:57.20:0,57,2417	0/0:16,0:16:45.13:0,45,1420	1/1:29,0:25:72.15:1532,72,0	0/0:25,0:25:75.17:0,75,2685	0/0:27,0:27:75.22:0,75,2598	0/0:17,0:17:51.17:0,51,1918	0/0:27,0:27:81.20:0,81,3075	0/0:14,0:14:39.12:0,39,1696	0/0:19,0:19:54.14:0,54,2067	1/1:19,0:19:18.03:610,18,0	0/0:24,0:24:72.23:0,72,2869	1/1:11,11:26:36.12:2383,36,0	0/0:26,0:26:69.16:0,69,2423	1/1:13,0:13:35.95:784,36,0	1/1:16,0:16:14.98:520,15,0	1/1:15,0:15:11.39:189,11,0	0/0:18,0:18:54.16:0,54,2188	0/0:15,0:15:45.14:0,45,1590	0/0:27,0:27:78.26:0,78,3033	0/0:14,0:14:39.09:0,39,1372	0/0:21,0:21:60.17:0,60,2301	1/1:19,0:19:42.13:1363,42,0	0/0:8,0:8:24.08:0,24,988
chr10	102974294	.	TCA	T	6284.36	PASS	AB=0.839;AC=38;AF=0.679;AN=56;BaseQRankSum=9.285;DP=645;FS=1.360;HRun=0;HaplotypeScore=84.9383;InbreedingCoeff=0.6686;MQ=58.44;MQ0=14;MQRankSum=3.620;QD=13.31;ReadPosRankSum=4.100;VQSLOD=4.7660;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:30:39.77:195,40,0	1/1:4,5:9:15.04:175,15,0	0/0:30,0:7:11.89:0,12,113	0/0:36,0:10:2.93:0,3,97	0/1:27,7:33:35.68:36,0,804	1/1:9,25:33:51.15:595,51,0	1/1:9,18:26:27.08:315,27,0	1/1:12,9:21:27.04:290,27,0	1/1:6,12:17:24.07:280,24,0	0/1:24,3:27:4.89:5,0,833	0/1:20,0:20:13.02:13,0,514	0/0:13,0:13:21.07:0,21,329	1/1:3,13:17:38.54:433,39,0	1/1:8,9:17:21.06:245,21,0	1/1:5,23:29:59.75:678,60,0	0/0:24,0:24:50.76:0,51,757	0/0:29,0:29:38.85:0,39,301	1/1:7,16:24:32.76:343,33,0	1/1:6,13:18:33.02:348,33,0	0/1:11,14:27:6.55:360,0,7	1/1:9,14:23:33.82:366,34,0	1/1:4,12:17:23.54:279,24,0	1/1:4,13:17:23.92:280,24,0	1/1:8,7:15:18.05:210,18,0	1/1:1,15:16:27.08:315,27,0	0/0:32,0:32:74.86:0,75,998	1/1:8,19:26:45.05:525,45,0	0/0:9,0:9:18.53:0,19,283
chr10	102974298	.	A	ACT	656.30	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.162;DP=651;FS=0.975;HRun=0;HaplotypeScore=109.8892;InbreedingCoeff=0.9133;MQ=58.07;MQ0=15;MQRankSum=0.656;QD=23.44;ReadPosRankSum=1.494;VQSLOD=4.2845;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:63.68:0,64,436	0/0:9,0:9:22.15:0,22,161	0/0:32,0:7:11.03:0,11,146	0/0:39,0:12:32.89:0,33,340	0/0:34,0:33:87.05:0,87,1091	0/0:31,0:30:56.70:0,57,420	0/0:26,0:25:47.06:0,47,370	0/0:25,0:24:59.53:0,60,470	0/0:18,0:17:32.85:0,33,250	0/0:29,0:29:84.12:0,84,1105	0/0:22,0:22:53.98:0,54,698	0/0:12,0:12:36.05:0,36,444	0/0:17,0:17:41.74:0,42,306	0/0:15,0:15:35.84:0,36,274	0/0:28,0:28:65.33:0,65,481	0/0:24,0:24:69.13:0,69,923	1/1:2,26:28:39.13:751,39,0	0/0:25,0:24:44.66:0,45,324	0/0:22,0:21:62.05:0,62,467	0/0:26,0:26:62.69:0,63,497	0/0:24,0:22:41.72:0,42,304	0/0:18,0:18:9.73:0,10,224	0/0:17,0:17:29.57:0,30,224	0/0:16,0:16:32.86:0,33,250	0/0:16,0:16:29.61:0,30,212	0/0:30,0:30:90.13:0,90,1177	0/0:26,0:25:62.67:0,63,476	0/0:10,0:10:27.51:0,28,344
chr10	102974484	.	A	AT	7909.08	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-13.658;DP=565;FS=2.893;HRun=9;HaplotypeScore=55.5640;InbreedingCoeff=0.9931;MQ=70.00;MQ0=0;MQRankSum=-0.856;QD=26.81;ReadPosRankSum=2.638;VQSLOD=5.2750;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,35:38:99:1080,99,0	1/1:2,18:21:47.96:512,48,0	0/0:10,0:10:17.21:0,17,136	0/0:11,0:11:12.11:0,12,119	0/0:30,0:30:74.96:0,75,651	1/1:0,15:15:42.11:465,42,0	1/1:0,20:20:47.96:512,48,0	0/0:25,0:25:59.98:0,60,521	1/1:1,16:18:47.96:512,48,0	0/0:19,0:19:47.99:0,48,416	0/0:24,0:24:68.97:0,69,595	0/0:16,0:16:38.98:0,39,339	1/1:4,17:21:48.13:531,48,0	1/1:2,12:14:30.08:332,30,0	1/1:4,10:14:33.07:354,33,0	0/0:18,0:18:47.97:0,48,413	1/1:3,26:29:49.15:770,49,0	1/1:5,25:30:72.19:796,72,0	0/0:23,0:23:56.93:0,57,484	0/0:22,0:22:56.98:0,57,495	0/0:23,0:23:59.99:0,60,521	1/1:1,16:17:45.04:471,45,0	1/1:1,15:16:42.11:465,42,0	1/1:4,26:31:75.04:811,75,0	1/1:0,10:10:27.07:299,27,0	0/0:17,0:18:44:0,44,365	0/0:24,0:24:56.98:0,57,494	0/0:7,0:7:18:0,18,156
chr10	102977184	.	CCAGGACTGGGTTCCTTGAACTGCAAGG	C	44.44	PASS	AC=2;AF=0.042;AN=48;BaseQRankSum=3.848;DP=599;FS=6.878;HRun=0;HaplotypeScore=373.3210;InbreedingCoeff=0.6553;MQ=54.92;MQ0=28;MQRankSum=3.817;QD=5.56;ReadPosRankSum=-3.134;VQSLOD=0.8057;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,6092	0/0:16,0:16:41.92:0,42,1984	0/0:25,0:5:15.05:0,15,602	0/0:13,0:2:6.02:0,6,350	0/0:37,0:36:99:0,99,4747	0/0:19,0:18:51.18:0,51,2584	0/0:32,0:31:87.30:0,87,3957	0/0:1,0:1:3.01:0,3,77	0/0:32,0:32:93.28:0,93,4723	0/0:35,0:34:99:0,99,5441	0/0:21,0:21:60.20:0,60,3009	0/0:19,0:19:44.99:0,45,2192	0/0:24,0:21:57.20:0,57,3328	0/0:25,0:24:69.24:0,69,3705	./.	0/0:37,0:37:99:0,99,5145	0/0:1,0:1:3.01:0,3,57	0/0:28,0:26:63.22:0,63,3189	./.	1/1:2,6:6:14.87:132,15,0	./.	0/0:35,0:35:84.28:0,84,3731	0/0:26,0:26:63.19:0,63,2707	0/0:31,0:31:84.29:0,84,4475	0/0:27,0:27:72.25:0,72,3656	0/0:42,0:41:99:0,123,6251	./.	0/0:12,0:12:36.12:0,36,1968
chr10	102978182	.	T	TTCTG	6960.52	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=10.801;DP=729;FS=2.366;HRun=0;HaplotypeScore=150.5163;InbreedingCoeff=0.7681;MQ=72.04;MQ0=2;MQRankSum=-13.614;QD=24.17;ReadPosRankSum=-1.451;VQSLOD=4.6958;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:11.21:594,11,0	0/1:15,0:15:46.70:308,0,47	0/0:39,0:31:8.14:0,8,95	0/0:34,0:27:32.79:0,33,398	0/0:18,0:18:33.11:0,33,523	1/1:24,0:24:15.17:650,15,0	0/1:25,0:25:6.86:264,0,7	0/0:50,0:50:60.15:0,60,812	1/1:35,0:35:25.19:821,25,0	0/0:29,0:29:54.18:0,54,861	0/0:21,0:22:39.10:0,39,552	0/0:25,0:25:48.08:0,48,709	0/1:23,0:23:28.71:583,0,29	1/1:23,0:23:39.13:738,39,0	0/0:33,0:33:60.18:0,60,909	0/0:21,0:22:36.10:0,36,529	1/1:3,17:20:45.15:1078,45,0	1/1:16,0:16:15.05:274,15,0	0/0:28,0:27:26.67:0,27,372	0/0:36,0:36:87.28:0,87,1365	0/0:32,0:32:63.21:0,63,1003	1/1:15,0:15:18.06:335,18,0	1/1:13,0:13:26.74:512,27,0	1/1:19,0:19:15.05:284,15,0	1/1:23,0:23:31.53:519,32,0	0/0:32,0:32:63.20:0,63,963	0/0:29,0:29:48.15:0,48,739	0/0:11,0:11:27.09:0,27,427
chr10	102978195	.	T	TCTGC	9429.01	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=12.980;DP=767;FS=1.520;HRun=0;HaplotypeScore=147.0175;InbreedingCoeff=0.8971;MQ=65.13;MQ0=6;MQRankSum=-12.934;QD=28.57;ReadPosRankSum=3.564;VQSLOD=4.6398;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,39:48:51.34:945,51,0	1/1:5,13:18:25.77:495,26,0	0/0:45,0:29:57.44:0,57,664	0/0:45,0:34:66.84:0,67,947	0/0:18,0:18:48.10:0,48,749	1/1:13,12:24:57.43:1071,57,0	1/1:2,19:24:18.46:393,18,0	0/0:51,0:51:99:0,135,1795	1/1:6,29:36:49.98:1161,50,0	0/0:26,0:26:72.16:0,72,1181	0/0:19,0:19:57.10:0,57,848	0/0:25,0:25:75.14:0,75,1114	1/1:10,12:22:49.82:924,50,0	1/1:1,23:24:42.08:986,42,0	0/0:32,0:32:90.18:0,90,1373	0/0:22,0:22:60.11:0,60,853	0/1:26,0:26:99:644,0,147	1/1:4,15:20:23.95:491,24,0	0/0:20,0:19:48.10:0,48,673	0/0:34,0:34:93.29:0,93,1688	0/0:36,0:36:99:0,102,1505	1/1:3,14:19:2.15:423,2,0	1/1:1,16:18:26.55:666,27,0	1/1:4,16:21:18.06:452,18,0	1/1:6,21:28:39.03:778,39,0	0/0:33,0:33:96.24:0,96,1484	0/0:22,0:22:66.14:0,66,1049	0/0:9,0:9:27.09:0,27,511
chr10	102978905	.	GA	G	6271.55	PASS	AB=0.814;AC=37;AF=0.661;AN=56;BaseQRankSum=9.546;DP=629;FS=0.726;HRun=10;HaplotypeScore=89.1299;InbreedingCoeff=0.7845;MQ=73.15;MQ0=0;MQRankSum=-2.959;QD=13.60;ReadPosRankSum=1.732;VQSLOD=5.0438;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:80.97:703,81,0	1/1:0,10:10:20.99:182,21,0	0/1:17,1:18:8.04:8,0,172	0/1:11,1:11:21.10:21,0,47	0/0:18,1:20:15.90:0,16,386	1/1:5,21:26:56.98:495,57,0	1/1:3,19:22:50.94:436,51,0	1/1:3,0:21:35.43:106,35,0	1/1:3,23:26:61.80:526,62,0	0/0:26,0:26:63.16:0,63,682	0/0:24,0:24:58.04:0,58,632	0/0:17,0:17:48.09:0,48,511	1/1:4,17:23:12.87:317,13,0	1/1:3,19:22:56.89:480,57,0	1/1:4,0:30:48.88:144,49,0	0/0:22,0:22:63.14:0,63,675	0/0:5,0:20:51.57:0,52,288	1/1:2,21:23:53.99:469,54,0	1/1:1,1:21:39.91:134,40,0	1/1:1,0:24:34.70:111,35,0	1/1:3,0:22:30.33:89,30,0	1/1:6,17:23:47.96:416,48,0	1/1:4,26:30:74.66:629,75,0	1/1:0,21:21:56.99:495,57,0	0/1:6,18:24:4.80:338,0,5	0/0:29,0:29:69.17:0,69,750	1/1:1,0:33:59.07:174,59,0	0/0:10,0:10:21.04:0,21,222
chr10	102979074	.	TCCTCTTCTGG	T	13206.05	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=16.378;DP=673;FS=1.591;HRun=0;HaplotypeScore=209.6120;InbreedingCoeff=0.9810;MQ=55.73;MQ0=2;MQRankSum=-17.690;QD=47.00;ReadPosRankSum=-0.758;VQSLOD=4.6500;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,35:36:46.03:1008,46,0	1/1:0,11:11:26.12:879,26,0	0/0:20,0:13:27.09:0,27,940	0/0:24,0:12:26.06:0,26,874	0/0:20,0:20:60.19:0,60,2961	1/1:0,23:23:51.09:1380,51,0	1/1:0,26:26:42.10:1197,42,0	0/0:34,0:34:99:0,99,4659	1/1:0,29:29:69.19:2138,69,0	0/0:17,0:17:51.17:0,51,2436	0/0:27,0:27:78.27:0,78,3913	0/0:22,0:22:63.19:0,63,3062	1/1:0,18:18:35.99:923,36,0	1/1:0,21:21:54.06:1501,54,0	0/0:22,0:22:66.21:0,66,3262	0/0:17,0:17:51.18:0,51,2659	0/0:27,0:27:81.17:0,81,4124	1/1:0,20:20:33.11:1047,33,0	0/0:15,0:14:33.11:0,33,1438	0/0:36,0:36:99:0,108,5401	0/0:39,0:39:99:0,117,6007	1/1:1,28:29:53.06:1142,53,0	1/1:1,22:23:29.54:798,30,0	1/1:3,23:26:4.78:196,5,0	1/1:1,18:19:41.97:997,42,0	0/0:32,0:32:96.32:0,96,4555	0/0:28,0:26:84.27:0,84,4058	0/0:12,0:12:36.12:0,36,1775
chr10	102979546	.	TCA	T	5388.07	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.666;DP=585;FS=4.655;HRun=0;HaplotypeScore=72.7663;InbreedingCoeff=0.9999;MQ=91.49;MQ0=1;MQRankSum=-1.981;QD=43.10;ReadPosRankSum=-0.530;VQSLOD=6.0069;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,2422	0/0:14,0:14:42.14:0,42,841	0/0:27,0:27:81.10:0,81,1441	0/0:22,0:22:45.72:0,46,1022	0/0:28,0:28:78.25:0,78,1531	0/0:18,0:18:54.19:0,54,1085	0/0:29,0:29:87.28:0,87,1685	1/1:0,27:27:78.27:1262,78,0	0/0:12,0:12:36.11:0,36,680	0/0:23,0:23:66.12:0,66,1340	0/0:15,0:15:45.15:0,45,886	0/0:18,0:18:54.19:0,54,1086	0/0:20,0:20:60.19:0,60,1182	0/0:26,0:26:78.25:0,78,1536	1/1:0,19:19:51.12:802,51,0	0/0:23,0:23:69.21:0,69,1320	0/0:23,0:23:69.20:0,69,1327	0/0:23,0:23:69.24:0,69,1384	1/1:0,16:16:48.16:781,48,0	1/1:0,14:14:36.12:587,36,0	1/1:0,30:30:75.26:1223,75,0	0/0:18,0:18:54.16:0,54,1025	0/0:16,0:16:45.15:0,45,914	0/0:15,0:15:45.15:0,45,900	0/0:16,0:16:42.14:0,42,853	0/0:20,0:20:57.20:0,57,1137	1/1:0,19:18:45.15:734,45,0	0/0:14,0:14:42.14:0,42,825
chr10	102979930	.	C	CAGAC	3954.10	PASS	AB=1.000;AC=39;AF=0.722;AN=54;BaseQRankSum=7.777;DP=594;FS=15.706;HRun=0;HaplotypeScore=135.4372;InbreedingCoeff=0.8354;MQ=47.45;MQ0=24;MQRankSum=0.682;QD=8.54;ReadPosRankSum=0.262;VQSLOD=2.0585;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:38:23.27:284,23,0	1/1:9,0:9:6.48:85,6,0	0/0:12,0:9:23.94:0,24,232	0/0:11,0:7:16.72:0,17,175	0/0:21,0:19:29.91:0,30,234	1/1:26,0:25:32.98:347,33,0	1/1:37,0:33:44.24:356,44,0	1/1:21,0:21:21.79:174,22,0	1/1:27,0:26:28.47:265,28,0	0/0:16,0:14:21.01:0,21,191	0/1:15,0:13:1.08:1,0,161	0/0:21,0:21:33.25:0,33,291	1/1:22,0:22:33.80:316,34,0	1/1:19,0:18:16.19:144,16,0	1/1:8,1:23:3.01:54,3,0	0/0:18,0:16:32.54:0,33,411	1/1:20,0:18:17.90:131,18,0	1/1:22,0:21:46.39:402,46,0	1/1:24,0:24:38.79:340,39,0	1/1:18,0:17:18.45:150,18,0	1/1:14,0:38:3:25,3,0	1/1:13,0:12:14.99:148,15,0	1/1:21,0:19:20.97:173,21,0	1/1:35,0:33:26.15:255,26,0	1/1:19,0:19:21.03:255,21,0	0/0:29,0:29:50.49:0,50,443	1/1:1,0:12:2.96:50,3,0	./.
chr10	102980125	.	GT	G	8987.69	PASS	AB=0.944;AC=37;AF=0.661;AN=56;BaseQRankSum=11.108;DP=631;FS=1.095;HRun=8;HaplotypeScore=78.3767;InbreedingCoeff=0.9514;MQ=69.73;MQ0=3;MQRankSum=-1.188;QD=21.05;ReadPosRankSum=0.591;VQSLOD=5.0760;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,36:39:99:956,99,0	1/1:1,9:10:24.04:231,24,0	0/0:33,0:23:18.39:0,18,335	0/1:32,2:22:1.41:1,0,194	0/0:16,1:17:19.17:0,19,514	1/1:3,14:17:36.05:348,36,0	1/1:6,22:28:45.06:435,45,0	1/1:3,29:32:87.12:833,87,0	1/1:3,29:32:72.11:695,72,0	0/0:24,0:24:65.88:0,66,786	0/0:18,0:18:51.16:0,51,616	0/0:22,0:22:63.19:0,63,761	1/1:1,17:18:45.07:434,45,0	1/1:1,14:15:39.06:377,39,0	1/1:3,13:16:30.05:290,30,0	0/0:14,0:14:36.09:0,36,422	0/0:26,0:26:66.20:0,66,797	1/1:1,23:24:60.09:579,60,0	1/1:2,8:10:24.02:225,24,0	1/1:2,18:19:51.08:490,51,0	1/1:1,17:18:42.07:406,42,0	1/1:2,16:18:44.65:430,45,0	1/1:1,17:18:48.08:464,48,0	1/1:5,31:36:84.13:811,84,0	1/1:3,22:25:56.98:550,57,0	0/0:38,0:38:99:0,111,1330	1/1:0,17:17:45.07:435,45,0	0/0:12,0:12:33.06:0,33,373
chr10	102981202	.	GT	G	2329.42	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.504;DP=597;FS=19.095;HRun=10;HaplotypeScore=68.9112;InbreedingCoeff=0.9484;MQ=80.89;MQ0=2;MQRankSum=-0.865;QD=18.49;ReadPosRankSum=-1.024;VQSLOD=2.3860;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:27:49.12:0,49,753	0/0:16,0:17:50.97:0,51,545	0/0:23,0:22:1.94:0,2,321	0/0:26,0:25:33.35:0,33,332	0/0:14,1:15:13.05:0,13,363	0/0:24,0:24:72.03:0,72,777	0/0:24,0:24:54.15:0,54,597	1/1:6,25:32:67.78:562,68,0	0/0:24,1:26:39.95:0,40,649	0/0:27,0:29:74.49:0,74,752	0/0:18,0:19:50.97:0,51,543	0/0:14,0:14:39.11:0,39,431	0/0:21,1:22:37.12:0,37,638	0/0:24,0:24:60.15:0,60,655	1/1:1,26:27:71.98:625,72,0	0/0:17,0:17:48.12:0,48,523	0/0:32,0:32:90.20:0,90,970	0/0:18,0:18:39.09:0,39,422	1/1:3,13:16:41.81:348,42,0	1/1:5,19:24:50.91:434,51,0	1/1:1,10:11:29.99:260,30,0	0/0:17,0:17:15.05:0,15,362	0/0:20,0:20:54.06:0,54,581	0/0:26,0:26:75.20:0,75,830	0/0:14,0:14:39.11:0,39,431	0/0:29,0:29:52.20:0,52,768	1/1:2,14:16:32.97:286,33,0	0/0:6,0:6:15.04:0,15,166
chr10	102982672	.	TGA	T	9811.29	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=11.623;DP=757;FS=2.512;HRun=0;HaplotypeScore=102.1505;InbreedingCoeff=0.9987;MQ=77.10;MQ0=0;MQRankSum=-7.905;QD=29.20;ReadPosRankSum=3.417;VQSLOD=6.4757;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,62:71:99:2100,166,0	1/1:1,11:12:27.09:344,27,0	0/0:32,0:30:59.69:0,60,789	0/0:42,0:38:56.28:0,56,886	0/0:32,0:32:87.27:0,87,1396	1/1:4,26:30:69.22:878,69,0	1/1:3,19:22:51.16:649,51,0	0/0:28,0:28:54.17:0,54,858	1/1:2,19:21:57.18:725,57,0	0/0:22,0:22:60.20:0,60,971	0/0:25,0:25:66.23:0,66,1104	0/0:30,0:30:78.27:0,78,1305	1/1:3,23:26:60.19:763,60,0	1/1:3,20:23:57.18:725,57,0	0/0:3,0:27:63.03:0,63,560	0/0:22,1:23:18.18:0,18,855	0/0:27,0:27:72.23:0,72,1178	1/1:5,24:29:60.19:764,60,0	0/0:14,0:14:30.10:0,30,502	0/0:25,0:25:72.21:0,72,1138	0/0:29,0:29:69.22:0,69,1122	1/1:3,17:20:48.15:611,48,0	1/1:3,25:28:66.21:840,66,0	1/1:6,27:33:71.87:916,72,0	1/1:5,16:21:39.12:496,39,0	0/0:25,0:24:57.19:0,57,932	0/0:24,0:24:57.19:0,57,953	0/0:16,0:16:45.15:0,45,753
chr10	102983697	.	A	AC	1029.23	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.310;DP=625;FS=0.000;HRun=1;HaplotypeScore=59.8563;InbreedingCoeff=0.9996;MQ=84.32;MQ0=0;MQRankSum=-2.657;QD=34.31;ReadPosRankSum=1.148;VQSLOD=3.4399;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1475	0/0:12,0:12:36.12:0,36,467	0/0:22,0:22:62.68:0,63,773	0/0:20,0:20:53.56:0,54,595	0/0:18,0:18:51.17:0,51,661	0/0:19,0:19:57.19:0,57,740	0/0:28,0:28:84.20:0,84,1040	0/0:29,0:29:81.26:0,81,1052	0/0:27,0:27:78.25:0,78,1011	0/0:23,0:23:66.21:0,66,857	0/0:16,0:16:48.16:0,48,623	0/0:23,0:23:66.21:0,66,857	0/0:15,0:15:45.13:0,45,570	0/0:25,0:25:75.24:0,75,973	0/0:24,0:24:66.20:0,66,843	0/0:21,0:21:63.20:0,63,815	1/1:1,29:30:75.25:1124,75,0	0/0:18,0:18:54.18:0,54,698	0/0:14,0:14:39.13:0,39,504	0/0:25,0:25:75.24:0,75,972	0/0:27,0:27:81.26:0,81,1047	0/0:19,0:19:57.18:0,57,735	0/0:21,0:21:63.20:0,63,818	0/0:29,0:28:87.28:0,87,1128	0/0:20,0:20:60.19:0,60,778	0/0:29,0:29:87.28:0,87,1129	0/0:20,0:19:60.20:0,60,779	0/0:12,0:12:36.12:0,36,464
chr10	102984365	.	A	ACCTT	18084.76	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-15.510;DP=815;FS=0.000;HRun=0;HaplotypeScore=125.5922;InbreedingCoeff=0.9999;MQ=75.46;MQ0=0;MQRankSum=-7.386;QD=51.09;ReadPosRankSum=2.096;VQSLOD=5.8632;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,29:44:78.27:1972,78,0	1/1:1,12:14:32.73:808,33,0	0/0:23,0:23:55.73:0,56,880	0/0:23,0:23:48.13:0,48,763	0/0:32,0:32:84.29:0,84,1442	1/1:8,18:27:54.19:1344,54,0	1/1:12,24:38:63.22:1592,63,0	0/0:29,0:29:66.22:0,66,1112	1/1:8,23:31:75.26:1802,75,0	0/0:27,0:27:81.25:0,81,1337	0/0:15,0:15:39.13:0,39,674	0/0:22,0:22:60.18:0,60,983	1/1:8,26:35:81.28:2027,81,0	1/1:9,25:35:69.24:1725,69,0	0/0:34,0:34:87.30:0,87,1497	0/0:41,0:41:99:0,114,1912	0/0:39,0:39:93.30:0,93,1579	1/1:7,12:22:36.12:910,36,0	0/0:25,0:25:48.15:0,48,776	0/0:25,0:25:60.21:0,60,1029	0/0:52,0:52:99:0,129,2136	1/1:4,18:25:60.16:1457,60,0	1/1:5,15:20:48.12:1110,48,0	1/1:6,21:30:50.84:1289,51,0	1/1:4,28:33:84.29:2049,84,0	0/0:27,0:27:69.24:0,69,1192	0/0:34,0:34:96.31:0,96,1628	0/0:13,0:13:33.11:0,33,570
chr10	102984611	.	GCAGT	G	14345.55	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=18.553;DP=688;FS=1.645;HRun=0;HaplotypeScore=138.9403;InbreedingCoeff=0.9999;MQ=80.00;MQ0=0;MQRankSum=-13.125;QD=49.98;ReadPosRankSum=1.846;VQSLOD=5.4137;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:37:96.33:1841,96,0	1/1:3,11:14:33.11:639,33,0	0/0:27,0:27:75.26:0,75,1978	0/0:22,0:22:57.20:0,57,1421	0/0:23,0:23:57.20:0,57,1535	1/1:1,17:18:54.13:977,54,0	1/1:4,23:26:66.23:1279,66,0	0/0:31,0:31:87.30:0,87,2278	1/1:7,24:31:84.25:1520,84,0	0/0:31,0:31:84.29:0,84,2256	0/0:22,0:22:63.22:0,63,1715	0/0:28,0:28:84.29:0,84,2225	1/1:2,30:32:87.26:1648,87,0	1/1:3,26:29:78.27:1511,78,0	0/0:38,0:38:99:0,114,3122	0/0:22,0:22:66.20:0,66,1685	0/0:17,0:17:51.18:0,51,1374	1/1:1,20:21:54.19:1047,54,0	0/0:22,0:21:63.22:0,63,1652	0/0:30,0:30:87.30:0,87,2383	0/0:18,0:18:54.19:0,54,1479	1/1:2,24:26:75.21:1411,75,0	1/1:1,11:12:33.07:601,33,0	1/1:2,22:24:57.15:1058,57,0	1/1:1,15:16:42.14:813,42,0	0/0:31,0:31:84.28:0,84,2144	0/0:28,0:28:84.29:0,84,2276	0/0:11,0:11:33.11:0,33,904
chr10	102984668	.	AATG	A	11577.72	PASS	AB=0.762;AC=24;AF=0.429;AN=56;BaseQRankSum=18.629;DP=701;FS=2.048;HRun=0;HaplotypeScore=151.1373;InbreedingCoeff=0.8541;MQ=67.97;MQ0=0;MQRankSum=-11.491;QD=37.47;ReadPosRankSum=2.981;VQSLOD=5.6608;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:31:84.26:1382,84,0	1/1:0,13:13:36.12:616,36,0	0/0:33,0:31:90.44:0,90,1854	0/0:34,0:34:83.78:0,84,1855	0/0:29,0:29:84.29:0,84,1808	1/1:3,18:21:57.16:916,57,0	1/1:11,12:22:51.07:822,51,0	0/0:31,0:31:93.32:0,93,2012	1/1:2,26:28:66.22:1084,66,0	0/0:35,0:35:99:0,105,2374	0/0:21,0:21:60.20:0,60,1291	0/0:29,0:29:87.28:0,87,1878	1/1:5,17:22:60.20:967,60,0	0/1:3,29:32:99:1123,0,105	0/0:30,0:30:90.31:0,90,1978	0/0:17,0:17:51.17:0,51,1140	0/1:21,0:21:89.90:170,0,90	1/1:1,20:21:45.15:793,45,0	0/0:22,0:21:63.22:0,63,1354	0/0:28,0:28:81.26:0,81,1705	0/0:25,0:25:72.25:0,72,1535	1/1:3,24:27:60.15:914,60,0	1/1:0,17:17:36.10:617,36,0	1/1:2,19:21:48.16:811,48,0	1/1:1,31:32:81.27:1363,81,0	0/0:24,0:24:69.24:0,69,1563	0/0:21,0:21:60.21:0,60,1372	0/0:13,0:13:39.13:0,39,833
chr10	102985189	.	C	CT	5669.93	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-15.969;DP=704;FS=1.580;HRun=3;HaplotypeScore=96.3870;InbreedingCoeff=0.9936;MQ=79.86;MQ0=0;MQRankSum=-2.308;QD=37.55;ReadPosRankSum=-2.384;VQSLOD=3.8771;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,126,1484	0/0:10,0:10:27.08:0,27,323	0/0:25,0:25:65.71:0,66,697	0/0:25,0:25:69.04:0,69,716	0/0:23,0:23:66.19:0,66,780	0/0:25,0:24:75.23:0,75,900	0/0:28,0:28:81.25:0,81,972	1/1:3,26:29:75.23:1028,75,0	0/0:20,0:20:57.16:0,57,672	0/0:31,0:31:78.21:0,78,910	0/0:16,0:16:42.13:0,42,504	0/0:26,0:26:78.23:0,78,925	0/0:25,0:25:69.19:0,69,804	0/0:27,0:27:78.21:0,78,905	1/1:2,25:27:69.23:966,69,0	0/0:23,0:23:69.21:0,69,827	0/0:33,0:33:96.29:0,96,1152	0/0:23,0:23:60.16:0,60,707	1/1:0,21:21:63.19:862,63,0	1/1:0,21:21:60.20:840,60,0	1/1:2,29:31:81.27:1134,81,0	0/0:29,0:29:81.25:0,81,967	0/0:22,0:22:63.19:0,63,755	0/0:39,0:39:99:0,108,1280	0/0:22,0:22:63.19:0,63,756	0/0:29,0:29:78.24:0,78,936	1/1:0,21:22:60.20:838,60,0	0/0:4,0:4:12.04:0,12,144
chr10	102988041	.	CGTGTGTGT	C	8150.21	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=5.993;DP=780;FS=1.363;HRun=0;HaplotypeScore=217.4361;InbreedingCoeff=0.9155;MQ=54.15;MQ0=9;MQRankSum=-14.502;QD=27.35;ReadPosRankSum=-0.719;VQSLOD=4.5387;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,16:40:15.05:383,15,0	1/1:3,7:10:18.06:459,18,0	0/0:16,0:5:3.01:0,3,62	0/0:25,0:6:6.02:0,6,185	0/0:17,0:19:30.10:0,30,1068	1/1:6,15:22:30.10:745,30,0	1/1:20,10:32:1.15:428,1,0	0/0:27,0:33:54.15:0,54,1556	1/1:7,21:28:40.79:1142,41,0	0/0:32,0:34:54.19:0,54,1950	0/0:19,0:19:36.12:0,36,1288	0/0:30,0:32:63.20:0,63,2381	1/1:8,14:22:42.14:942,42,0	1/1:14,21:38:45.15:1043,45,0	0/0:16,0:32:33.11:0,33,1163	0/0:30,0:32:60.18:0,60,2186	0/0:17,0:39:80.05:0,80,1790	1/1:3,9:12:18.06:459,18,0	0/0:19,0:25:37.37:0,37,1188	0/0:19,0:32:41.70:0,42,1502	0/0:37,0:74:99:0,105,3377	1/1:9,15:24:27.09:689,27,0	1/1:4,16:21:30.17:754,30,0	1/1:11,9:22:8.97:209,9,0	1/1:7,19:27:35.63:897,36,0	0/0:28,0:31:63.21:0,63,2309	0/0:13,0:25:45.15:0,45,1628	0/0:10,0:10:19.88:0,20,363
chr10	102991551	.	AAT	A	807.90	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=7.430;DP=519;FS=2.791;HRun=0;HaplotypeScore=66.0373;InbreedingCoeff=0.6476;MQ=72.66;MQ0=3;MQRankSum=-2.343;QD=16.49;ReadPosRankSum=0.437;VQSLOD=3.1776;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,2068	0/0:7,0:7:19.62:0,20,314	0/0:30,0:16:26.80:0,27,365	0/1:20,0:10:18.01:18,0,106	0/0:25,0:25:72.20:0,72,1185	0/0:17,0:17:51.14:0,51,824	0/0:16,0:16:48.13:0,48,773	0/0:24,0:24:69.22:0,69,1133	0/0:23,0:23:66.16:0,66,1036	0/0:16,0:16:45.13:0,45,714	0/0:12,0:12:30.08:0,30,472	0/0:14,0:14:42.14:0,42,725	0/0:19,0:19:57.13:0,57,856	0/0:11,0:11:33.10:0,33,540	0/0:11,0:11:33.11:0,33,569	0/0:14,0:14:42.12:0,42,661	1/1:3,26:29:63.13:895,63,0	0/0:18,0:18:51.65:0,52,881	0/0:16,0:16:44.93:0,45,627	0/0:13,0:13:39.13:0,39,669	0/0:20,0:20:57.08:0,57,820	0/0:10,0:10:30.06:0,30,437	0/0:18,0:18:54.17:0,54,902	0/0:18,0:18:54.15:0,54,896	0/0:19,0:19:54.18:0,54,931	0/0:18,0:18:51.17:0,51,871	0/0:19,0:18:56.88:0,57,861	0/0:21,0:21:60.07:0,60,892
chr10	102992983	.	TACACACACACACAC	T	2649.25	PASS	AB=0.728;AC=20;AF=0.400;AN=50;BaseQRankSum=7.900;DP=599;FS=5.071;HRun=0;HaplotypeScore=172.7556;InbreedingCoeff=0.4385;MQ=42.65;MQ0=42;MQRankSum=-6.667;QD=10.86;ReadPosRankSum=1.875;VQSLOD=2.2864;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,20:33:2.68:0,3,106	1/1:1,2:3:2.88:119,3,0	0/0:54,0:16:10.28:0,10,362	0/0:67,0:14:18.06:0,18,830	0/0:16,0:17:39.13:0,39,2385	0/0:6,7:13:2.49:0,2,5	1/1:11,22:33:9.03:339,9,0	./.	1/1:8,11:19:11.73:336,12,0	0/0:19,0:18:42.13:0,42,2030	0/0:10,0:10:21.07:0,21,1321	0/0:19,0:18:48.16:0,48,2882	0/1:10,9:17:27.33:579,0,27	1/1:19,8:27:5.67:232,6,0	0/1:25,0:28:0:0,0,1	0/0:8,0:7:18.06:0,18,1117	0/1:5,0:16:99:374,0,253	0/1:11,6:16:99:260,0,124	1/1:5,0:9:1.69:189,2,0	0/0:2,0:14:0:0,0,0	1/1:25,0:31:1.07:3,1,0	1/1:8,9:17:0.59:1,1,0	./.	0/0:17,10:24:2.97:0,3,20	./.	0/0:15,0:14:36.11:0,36,1756	1/1:5,0:15:11.83:367,12,0	0/0:11,0:11:18.06:0,18,881
chr10	102992995	.	CACACACACACACACACACACACGAGAGAGAGAGA	C	1811.21	PASS	AB=1.000;AC=8;AF=0.148;AN=54;BaseQRankSum=3.268;DP=501;FS=10.271;HRun=0;HaplotypeScore=226.8084;InbreedingCoeff=0.4870;MQ=38.64;MQ0=52;MQRankSum=-2.305;QD=26.64;ReadPosRankSum=1.207;VQSLOD=0.8645;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:7.30:0,7,264	0/0:2,0:2:2.04:0,2,6	0/0:38,0:7:21.06:0,21,876	0/0:55,0:9:21.07:0,21,1389	0/0:17,0:16:39.13:0,39,3989	0/0:10,0:10:4.84:0,5,54	0/1:36,0:31:22.96:23,0,212	1/1:3,0:2:6.01:74,6,0	0/0:18,0:18:18.31:0,18,287	0/0:19,0:18:51.18:0,51,4208	0/0:11,0:11:27.09:0,27,2257	0/0:21,0:20:56:0,56,4881	0/0:22,0:20:40.58:0,41,1068	0/0:20,0:19:21.56:0,22,633	0/0:3,18:22:1.25:0,1,2	0/0:11,0:9:27.09:0,27,2611	0/1:14,0:14:99:688,0,488	0/0:14,0:14:25.11:0,25,707	1/1:5,0:5:15.01:478,15,0	0/0:12,0:12:0:0,0,0	0/0:22,0:12:1.25:0,1,3	0/0:15,0:13:5.95:0,6,189	./.	0/0:23,0:21:6.02:0,6,221	0/0:13,0:13:3.01:0,3,100	0/0:19,0:18:54.19:0,54,4294	1/1:10,0:10:11.58:684,12,0	0/0:9,0:8:21.07:0,21,1458
chr10	102993005	.	C	CGTGT	977.74	PASS	AB=0.984;AC=8;AF=0.160;AN=50;BaseQRankSum=0.437;DP=493;FS=0.000;HRun=0;HaplotypeScore=110.8620;InbreedingCoeff=0.2914;MQ=37.32;MQ0=51;MQRankSum=-4.087;QD=9.22;ReadPosRankSum=-4.123;VQSLOD=1.4994;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:2.85:0,3,62	0/0:4,0:4:2.13:0,2,28	0/0:22,0:3:8.99:0,9,145	0/0:34,0:7:18.06:0,18,360	0/0:18,0:17:39.13:0,39,785	./.	0/0:36,0:31:11.47:0,11,145	1/1:8,4:10:23.20:590,23,0	0/0:17,0:17:0.29:0,0,111	0/0:19,0:18:48.16:0,48,975	0/0:9,0:9:21.07:0,21,416	0/0:23,0:22:56.72:0,57,1080	0/0:18,0:15:24.26:0,24,332	0/0:17,0:15:8.81:0,9,106	0/1:24,0:24:0.22:1,0,0	0/0:12,0:10:30.10:0,30,626	0/1:17,2:19:99:207,0,200	0/0:15,0:14:21.05:0,21,339	0/1:8,0:8:7.43:236,0,7	0/1:14,0:14:0.09:0,0,0	0/0:25,1:13:0:0,0,0	0/1:16,0:14:0.01:0,0,0	./.	0/0:23,0:21:3.01:0,3,63	./.	0/0:18,0:17:51.17:0,51,1017	0/1:13,0:13:58.72:59,0,70	0/0:9,0:7:18.06:0,18,375
chr10	102993016	.	ACGAGAGAG	A	144.32	PASS	AB=1.000;AC=5;AF=0.096;AN=52;BaseQRankSum=2.985;DP=494;FS=1.149;HRun=0;HaplotypeScore=125.2596;InbreedingCoeff=0.2907;MQ=38.50;MQ0=40;MQRankSum=-1.305;QD=2.19;ReadPosRankSum=0.900;VQSLOD=2.5488;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:2.84:0,3,9	0/0:5,0:5:1.46:0,1,4	0/0:5,0:2:2.80:0,3,13	0/0:5,0:2:2.92:0,3,17	0/0:17,0:16:31.94:0,32,430	0/0:12,0:12:0.36:0,0,1	0/0:42,0:37:14.87:0,15,347	0/0:16,0:14:35.08:0,35,150	0/0:18,0:18:5.77:0,6,178	0/0:16,0:15:34.05:0,34,544	0/1:10,0:10:3.84:4,0,175	0/0:23,0:23:27.12:0,27,578	0/0:22,0:18:19.65:0,20,483	0/0:20,0:18:10.83:0,11,406	0/1:25,0:25:0.40:0,0,1	0/0:14,0:12:32.77:0,33,423	0/0:21,0:19:8.45:0,8,50	0/0:18,0:17:33.72:0,34,772	0/1:12,0:11:32.79:144,0,33	0/0:16,0:16:0:0,0,0	0/0:30,0:16:0:0,0,0	0/0:17,0:15:0:0,0,0	./.	0/0:23,0:21:3.01:0,3,95	./.	0/0:19,0:17:16.81:0,17,521	1/1:15,4:19:0.93:84,1,0	0/0:6,0:4:7.96:0,8,45
chr10	102993751	.	A	ACTT	8635.52	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=8.419;DP=346;FS=1.791;HRun=0;HaplotypeScore=150.0641;InbreedingCoeff=0.8959;MQ=57.65;MQ0=25;MQRankSum=-6.892;QD=39.61;ReadPosRankSum=3.765;VQSLOD=6.0386;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:11:30.10:537,30,0	1/1:4,0:3:9.02:130,9,0	0/0:30,0:12:22.87:0,23,301	0/1:18,0:5:5.90:6,0,44	0/0:18,0:16:30.58:0,31,413	1/1:5,0:5:15.01:236,15,0	1/1:14,0:13:33.09:577,33,0	1/1:12,0:12:34.32:573,34,0	1/1:9,0:9:27.09:478,27,0	0/0:16,0:15:36.76:0,37,508	0/0:18,0:17:37.08:0,37,493	0/0:6,0:6:15.92:0,16,191	1/1:15,0:15:45.14:781,45,0	1/1:6,0:6:18.06:326,18,0	1/1:14,0:13:39.13:672,39,0	0/0:7,0:7:15.52:0,16,234	1/1:11,0:10:19.42:384,19,0	1/1:8,0:7:15.04:259,15,0	1/1:8,0:6:18.06:331,18,0	1/1:8,0:7:21.07:366,21,0	1/1:6,0:6:15.01:226,15,0	1/1:11,4:15:21:367,21,0	1/1:8,0:8:21.05:377,21,0	1/1:5,0:4:8.99:114,9,0	1/1:23,0:23:63.16:1119,63,0	0/0:21,0:20:37.94:0,38,542	1/1:16,0:16:45.13:777,45,0	0/0:12,0:11:18.54:0,19,237
chr10	102993941	.	T	TAC	1767.54	PASS	AB=0.820;AC=26;AF=0.565;AN=46;BaseQRankSum=-3.415;DP=527;FS=0.986;HRun=0;HaplotypeScore=88.6376;InbreedingCoeff=0.4961;MQ=74.57;MQ0=12;MQRankSum=1.083;QD=6.52;ReadPosRankSum=-0.890;VQSLOD=2.6698;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,13:37:37.70:242,0,38	1/1:4,0:4:3.01:42,3,0	./.	./.	0/0:21,0:20:9.02:0,9,97	1/1:18,0:18:9:91,9,0	1/1:20,4:26:11.80:177,12,0	./.	1/1:4,5:11:9.03:133,9,0	0/0:17,0:18:3:0,3,32	./.	0/0:10,0:14:17.42:0,17,138	1/1:18,0:17:3.01:37,3,0	1/1:5,1:9:3.01:45,3,0	0/0:12,0:19:14.20:0,14,70	0/0:15,0:15:18.04:0,18,194	1/1:19,0:19:23.66:194,24,0	0/1:7,6:14:14.23:204,0,14	0/0:10,0:13:8.52:0,9,42	0/0:12,0:16:11.50:0,11,63	./.	1/1:19,1:19:20.94:198,21,0	1/1:8,4:12:3.01:44,3,0	1/1:23,14:39:26.83:399,27,0	1/1:16,1:17:3.48:46,3,0	0/1:15,2:16:4.50:75,0,4	0/1:9,0:9:0:0,0,0	0/0:10,0:11:11.70:0,12,93
chr10	102994525	.	CAACT	C	1937.70	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=3.974;DP=421;FS=21.943;HRun=0;HaplotypeScore=92.5143;InbreedingCoeff=0.9950;MQ=88.02;MQ0=0;MQRankSum=-5.164;QD=35.88;ReadPosRankSum=-0.867;VQSLOD=1.3215;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,105,2692	0/0:9,0:9:27.09:0,27,657	0/0:13,0:13:39.13:0,39,1026	0/0:18,0:18:42.14:0,42,1010	0/0:13,0:13:39.13:0,39,1035	0/0:11,0:11:33.11:0,33,880	0/0:22,0:22:63.22:0,63,1679	1/1:2,10:12:27.07:442,27,0	0/0:19,0:19:51.18:0,51,1360	0/0:9,0:9:27.09:0,27,721	0/0:8,0:8:24.08:0,24,640	0/0:12,0:12:36.12:0,36,954	0/0:18,0:18:51.18:0,51,1344	0/0:10,0:10:30.10:0,30,768	0/0:13,0:13:39.13:0,39,1033	0/0:10,0:10:30.10:0,30,800	0/0:26,0:26:75.22:0,75,1888	0/0:27,0:27:74.75:0,75,1914	1/1:0,6:6:18.06:336,18,0	1/1:2,7:9:21.07:371,21,0	1/1:2,12:13:27.09:459,27,0	0/0:13,0:13:36.11:0,36,905	0/0:15,0:15:42.14:0,42,1086	0/0:28,0:28:72.20:0,72,1791	0/0:17,0:17:51.18:0,51,1300	0/0:16,0:16:48.16:0,48,1145	1/1:2,11:13:26.96:504,27,0	./.
chr10	102995505	.	CG	C	5482.37	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-5.566;DP=587;FS=11.092;HRun=4;HaplotypeScore=114.7642;InbreedingCoeff=0.9986;MQ=87.78;MQ0=0;MQRankSum=-0.443;QD=32.63;ReadPosRankSum=-0.764;VQSLOD=3.2103;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,1415	0/0:11,0:11:33.11:0,33,455	0/0:21,0:21:45.01:0,45,594	0/0:24,0:24:62.59:0,63,853	0/0:14,0:14:39.13:0,39,546	0/0:12,0:12:27.09:0,27,376	0/0:24,0:24:66.15:0,66,862	1/1:3,20:23:57.17:684,57,0	0/0:27,0:27:69.19:0,69,944	0/0:20,0:20:51.17:0,51,712	0/0:15,0:15:42.14:0,42,587	0/0:21,0:21:51.16:0,51,697	0/0:23,0:23:60.20:0,60,834	0/0:26,0:26:69.22:0,69,944	1/1:3,30:33:93.24:1097,93,0	0/0:17,0:17:48.15:0,48,655	0/0:25,0:25:63.20:0,63,864	0/0:15,0:15:36.12:0,36,500	1/1:2,21:23:66.20:789,66,0	1/1:2,18:20:54.16:646,54,0	1/1:0,45:45:99:1439,120,0	0/0:16,0:16:33.11:0,33,458	0/0:8,0:8:21.04:0,21,258	0/0:18,0:18:45.15:0,45,628	0/0:22,0:22:51.14:0,51,677	0/0:10,0:10:27.08:0,27,362	1/1:0,24:24:69.21:827,69,0	0/0:13,0:13:39.11:0,39,527
chr10	102995559	.	G	GGTAA	15135.22	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=16.087;DP=599;FS=10.514;HRun=0;HaplotypeScore=158.1402;InbreedingCoeff=0.9995;MQ=90.88;MQ0=0;MQRankSum=-18.506;QD=66.09;ReadPosRankSum=-1.324;VQSLOD=5.5658;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,21:35:84.08:1897,84,0	1/1:3,6:9:24.08:598,24,0	0/0:23,0:23:60.19:0,60,1075	0/0:33,0:33:83.06:0,83,1470	0/0:23,0:23:66.23:0,66,1244	1/1:3,15:18:54.19:1415,54,0	1/1:7,18:25:63.17:1635,63,0	0/0:22,0:22:54.17:0,54,952	1/1:2,21:23:63.21:1686,63,0	0/0:24,0:24:63.22:0,63,1190	0/0:19,0:19:48.16:0,48,911	0/0:21,0:21:54.16:0,54,955	1/1:4,13:17:42.14:1083,42,0	1/1:5,18:23:60.21:1582,60,0	0/0:28,0:28:84.28:0,84,1553	0/0:12,0:12:33.10:0,33,595	0/0:20,0:20:54.19:0,54,1004	1/1:3,10:13:33.07:774,33,0	0/0:34,0:34:96.29:0,96,1732	0/0:17,0:17:48.16:0,48,903	0/0:43,0:43:99:0,120,2228	1/1:2,13:15:42.14:1120,42,0	1/1:4,13:17:45.11:1077,45,0	1/1:4,10:14:30.07:714,30,0	1/1:2,17:20:60.16:1554,60,0	0/0:14,0:14:36.12:0,36,676	0/0:21,0:20:54.17:0,54,992	0/0:16,0:16:45.15:0,45,855
chr10	102995592	.	C	CA	7298.96	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=17.546;DP=574;FS=2.509;HRun=0;HaplotypeScore=127.1458;InbreedingCoeff=0.9983;MQ=83.25;MQ0=0;MQRankSum=-15.567;QD=34.27;ReadPosRankSum=1.924;VQSLOD=4.5255;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,37:38:60.18:944,60,0	1/1:1,7:8:24.08:375,24,0	0/0:20,0:20:57.17:0,57,773	0/0:20,0:20:57.17:0,57,765	0/0:26,0:26:78.26:0,78,1081	1/1:0,18:18:45.15:696,45,0	1/1:0,16:16:36.12:573,36,0	0/0:32,0:32:87.29:0,87,1214	1/1:0,12:12:36.12:573,36,0	0/0:30,0:30:90.30:0,90,1243	0/0:17,0:17:51.17:0,51,712	0/0:24,0:24:72.24:0,72,1006	1/1:1,14:15:36.12:572,36,0	1/1:0,23:23:57.19:907,57,0	0/0:25,0:25:75.25:0,75,1046	0/0:12,0:12:36.11:0,36,486	0/0:19,0:19:54.18:0,54,753	1/1:0,15:15:39.13:616,39,0	0/0:31,0:31:87.27:0,87,1184	0/0:17,0:17:51.17:0,51,712	0/0:38,0:38:99:0,105,1465	1/1:0,14:14:36.12:573,36,0	1/1:0,17:17:18.06:286,18,0	1/1:0,15:15:27.09:420,27,0	1/1:1,21:22:48.16:764,48,0	0/0:15,0:15:45.15:0,45,627	0/0:21,0:20:57.19:0,57,782	0/0:14,0:14:42.14:0,42,587
chr10	102995718	.	GA	G	7003.24	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=13.624;DP=590;FS=5.440;HRun=5;HaplotypeScore=60.9653;InbreedingCoeff=0.9993;MQ=84.99;MQ0=0;MQRankSum=-4.816;QD=29.43;ReadPosRankSum=3.444;VQSLOD=5.4682;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,45:47:99:1361,120,0	1/1:1,10:11:24.07:272,24,0	0/0:22,0:22:48.06:0,48,601	0/0:17,0:17:39.08:0,39,494	0/0:33,0:33:84.27:0,84,1121	1/1:2,26:28:75.21:850,75,0	1/1:1,22:23:60.17:678,60,0	0/0:34,0:34:99:0,99,1295	1/1:1,15:16:42.12:476,42,0	0/0:25,0:25:69.23:0,69,944	0/0:15,0:15:45.15:0,45,616	0/0:9,0:9:27.09:0,27,368	1/1:0,22:22:57.16:646,57,0	1/1:0,12:12:36.10:408,36,0	0/0:20,0:20:57.17:0,57,749	0/0:12,0:12:36.11:0,36,476	0/0:30,0:30:87.29:0,87,1188	1/1:0,15:15:39.11:442,39,0	0/0:29,0:29:75.24:0,75,1010	0/0:26,0:26:78.26:0,78,1066	0/0:12,0:12:36.12:0,36,492	1/1:4,18:22:51.14:578,51,0	1/1:0,14:14:33.09:374,33,0	1/1:1,9:10:27.07:304,27,0	1/1:0,18:18:54.15:613,54,0	0/0:26,0:26:78.26:0,78,1066	0/0:27,0:25:78.26:0,78,1066	0/0:15,0:15:45.15:0,45,614
chr10	102996431	.	TAC	T	688.77	PASS	AB=0.897;AC=18;AF=0.321;AN=56;BaseQRankSum=0.032;DP=296;FS=1.444;HRun=0;HaplotypeScore=44.6673;InbreedingCoeff=0.3835;MQ=88.17;MQ0=1;MQRankSum=-2.560;QD=5.89;ReadPosRankSum=-0.801;VQSLOD=2.5061;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:25.25:204,25,0	1/1:2,0:2:6.01:59,6,0	0/0:21,0:19:31.44:0,31,473	0/0:16,0:16:31.88:0,32,329	0/0:5,0:5:3.01:0,3,48	0/1:14,0:14:13.82:33,0,14	0/1:4,16:22:5.08:118,0,5	0/0:18,0:18:53.94:0,54,577	0/1:9,0:9:15.28:88,0,15	0/0:4,0:4:6:0,6,55	0/0:5,0:5:9.03:0,9,132	0/0:13,0:13:32.83:0,33,401	0/1:13,0:14:14.92:54,0,15	0/1:9,0:9:11.08:63,0,11	0/0:17,0:17:23.98:0,24,256	0/0:7,0:7:17.01:0,17,187	0/0:19,0:19:20.86:0,21,219	0/1:8,0:9:8.24:50,0,8	0/0:14,0:14:30.25:0,30,352	0/0:2,0:2:2.90:0,3,16	0/0:17,0:17:31.69:0,32,339	1/1:3,0:3:5.99:49,6,0	1/1:1,0:1:1.25:3,1,0	1/1:14,0:14:9.89:81,10,0	1/1:6,0:6:9.63:58,10,0	0/0:9,0:9:18.43:0,18,144	0/0:10,0:10:24.05:0,24,308	0/0:2,0:2:6:0,6,62
chr10	102996433	.	CA	C	1039.48	PASS	AB=0.766;AC=26;AF=0.464;AN=56;BaseQRankSum=1.447;DP=291;FS=0.000;HRun=1;HaplotypeScore=42.3912;InbreedingCoeff=0.6821;MQ=86.87;MQ0=1;MQRankSum=-1.863;QD=7.93;ReadPosRankSum=-1.497;VQSLOD=0.1206;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:27.97:217,28,0	1/1:2,0:2:6.01:56,6,0	0/0:20,0:18:0.89:0,1,374	0/0:15,0:15:8.04:0,8,243	0/1:3,2:5:4.36:4,0,34	1/1:16,0:16:24.04:172,24,0	1/1:22,1:23:9.62:76,10,0	0/0:18,0:18:48.85:0,49,471	1/1:9,0:9:12.63:109,13,0	0/0:5,0:5:8.98:0,9,75	0/0:4,0:4:8.72:0,9,87	0/0:14,0:14:29.90:0,30,303	1/1:15,0:15:17.46:122,17,0	1/1:9,0:9:7.64:97,8,0	0/0:16,0:16:23.90:0,24,200	0/0:7,0:7:17.05:0,17,141	0/0:18,0:18:20.73:0,21,170	1/1:7,0:7:11.77:84,12,0	0/0:12,1:13:8.46:0,8,276	0/0:2,0:2:0:0,0,0	0/0:15,1:16:5.67:0,6,242	1/1:4,0:4:6:52,6,0	1/1:1,0:1:3.01:30,3,0	1/1:14,0:14:13.25:108,13,0	1/1:5,0:5:11.99:102,12,0	0/1:7,2:9:4.80:5,0,106	0/0:10,0:10:23.21:0,23,204	0/0:2,0:2:6:0,6,59
chr10	102997747	.	G	GA	736.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.775;DP=643;FS=7.771;HRun=8;HaplotypeScore=138.9272;InbreedingCoeff=0.8833;MQ=70.29;MQ0=1;MQRankSum=1.766;QD=25.39;ReadPosRankSum=-0.320;VQSLOD=2.0026;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:85.36:0,85,539	0/0:10,0:10:26.26:0,26,163	0/0:22,0:21:42.01:0,42,384	0/0:11,0:11:6.96:0,7,164	0/0:25,0:25:60.02:0,60,549	0/0:25,0:24:60.01:0,60,320	0/0:19,0:19:40.77:0,41,222	0/0:37,0:37:90.04:0,90,822	0/0:26,0:26:34.40:0,34,348	0/0:24,0:24:63.03:0,63,574	0/0:18,1:19:12.77:0,13,357	0/0:26,0:26:75.04:0,75,686	0/0:17,0:17:40.45:0,40,225	0/0:22,0:22:46.12:0,46,265	0/0:27,0:27:72.04:0,72,658	0/0:26,0:26:75.02:0,75,681	1/1:4,25:29:72.21:831,72,0	0/0:22,0:22:17.58:0,18,227	0/0:25,0:25:39.31:0,39,509	0/0:20,0:20:51.02:0,51,467	0/0:27,0:27:66.03:0,66,604	0/0:20,0:20:46.61:0,47,274	0/0:20,0:20:19.18:0,19,216	0/0:33,0:33:61.14:0,61,404	0/0:25,0:25:59.43:0,59,341	0/0:19,0:19:45:0,45,404	0/0:14,0:14:36.02:0,36,330	0/0:9,0:9:27.01:0,27,247
chr10	102997755	.	AC	A	2305.34	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=16.191;DP=645;FS=13.479;HRun=1;HaplotypeScore=135.2533;InbreedingCoeff=0.9774;MQ=72.06;MQ0=1;MQRankSum=-0.229;QD=8.09;ReadPosRankSum=1.200;VQSLOD=-0.1466;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:46,0:46:86.89:465,87,0	1/1:11,0:11:6.89:86,7,0	0/0:22,0:21:56.69:0,57,684	0/0:17,0:17:8.83:0,9,339	0/0:24,0:24:69.17:0,69,884	1/1:22,1:22:32.34:193,32,0	1/1:17,0:17:30.11:178,30,0	0/0:38,0:38:99:0,111,1367	1/1:28,0:28:38.01:234,38,0	0/0:23,0:23:68.42:0,68,889	0/0:18,0:18:54.02:0,54,659	0/0:27,0:27:81.21:0,81,1034	1/1:16,0:16:18.36:100,18,0	1/1:20,1:21:24.28:170,24,0	0/0:27,0:27:78.23:0,78,1027	0/0:25,0:25:75.23:0,75,1004	0/0:29,0:29:81.64:0,82,496	1/1:22,0:22:35.03:187,35,0	0/0:24,0:24:72.08:0,72,899	0/0:21,0:21:60.15:0,60,762	0/0:24,0:24:72.21:0,72,947	1/1:21,0:21:38.26:203,38,0	1/1:19,0:19:27.18:129,27,0	1/1:34,0:34:68.25:340,68,0	1/1:25,2:27:37.47:248,37,0	0/0:18,0:18:54.12:0,54,674	0/0:14,0:14:42.11:0,42,538	0/0:9,0:9:27.09:0,27,363
chr10	102997769	.	TC	T	9516.36	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=18.400;DP=619;FS=13.892;HRun=1;HaplotypeScore=102.0807;InbreedingCoeff=0.9999;MQ=76.87;MQ0=0;MQRankSum=-5.383;QD=36.46;ReadPosRankSum=5.517;VQSLOD=3.4601;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:44:99:1635,117,0	1/1:0,11:11:33.11:461,33,0	0/0:18,0:18:54.17:0,54,829	0/0:22,0:22:61.64:0,62,872	0/0:20,0:20:60.20:0,60,958	1/1:0,23:23:63.21:881,63,0	1/1:0,20:20:51.17:713,51,0	0/0:29,0:29:87.20:0,87,1311	1/1:0,27:27:72.24:1005,72,0	0/0:25,0:25:75.26:0,75,1194	0/0:20,0:20:60.20:0,60,950	0/0:28,0:28:81.26:0,81,1256	1/1:0,14:14:39.13:545,39,0	1/1:0,19:19:51.17:712,51,0	0/0:29,0:29:87.27:0,87,1341	0/0:21,0:21:63.18:0,63,959	0/0:31,0:31:90.31:0,90,1432	1/1:0,19:19:48.12:671,48,0	0/0:19,0:19:57.19:0,57,906	0/0:21,0:21:57.19:0,57,910	0/0:25,0:25:72.23:0,72,1127	1/1:0,15:15:39.13:545,39,0	1/1:0,16:16:39.13:545,39,0	1/1:0,30:30:87.29:1216,87,0	1/1:0,23:23:42.14:587,42,0	0/0:20,0:20:60.20:0,60,959	0/0:14,0:14:42.14:0,42,670	0/0:16,0:16:45.12:0,45,671
chr10	102997880	.	GAA	G	4792.13	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=17.115;DP=519;FS=13.177;HRun=2;HaplotypeScore=128.2678;InbreedingCoeff=0.9947;MQ=81.38;MQ0=0;MQRankSum=-15.762;QD=30.14;ReadPosRankSum=1.497;VQSLOD=3.6090;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:57.17:691,57,0	1/1:1,6:7:20.99:216,21,0	0/0:21,0:21:42.74:0,43,1101	0/0:13,0:14:35.97:0,36,631	0/0:26,0:26:75.26:0,75,1488	1/1:1,11:12:36.06:403,36,0	1/1:2,10:12:36.05:402,36,0	0/0:30,0:30:90.29:0,90,1728	1/1:2,16:18:50.78:572,51,0	0/0:28,0:28:81.27:0,81,1581	0/0:18,0:18:54.17:0,54,1036	0/0:27,0:27:81.28:0,81,1619	1/1:1,19:20:56.94:621,57,0	1/1:0,11:11:30.09:348,30,0	0/0:26,0:26:78.25:0,78,1506	0/0:19,0:19:57.20:0,57,1131	0/0:30,0:30:90.31:0,90,1765	1/1:0,5:5:15.05:185,15,0	0/0:23,0:23:69.22:0,69,1312	0/0:20,0:20:60.18:0,60,1121	0/0:37,0:37:99:0,111,2216	1/1:3,15:18:44.73:432,45,0	1/1:0,9:9:14.83:153,15,0	1/1:1,14:15:36.02:393,36,0	1/1:0,11:11:33.06:376,33,0	0/0:15,0:15:42.14:0,42,838	0/0:14,0:14:42.14:0,42,839	0/0:12,0:12:36.12:0,36,708
chr10	102997883	.	GA	G	1204.91	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=16.579;DP=521;FS=5.977;HRun=2;HaplotypeScore=130.3398;InbreedingCoeff=0.9872;MQ=83.04;MQ0=0;MQRankSum=-16.169;QD=7.98;ReadPosRankSum=3.764;VQSLOD=1.2825;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:49:216,49,0	1/1:0,6:6:15.21:64,15,0	0/0:22,0:23:64.09:0,64,966	0/0:15,0:15:31.76:0,32,546	0/0:26,0:26:78.27:0,78,1241	1/1:0,11:11:30.22:136,30,0	1/1:1,10:11:24.76:113,25,0	0/0:31,0:31:93.32:0,93,1477	1/1:1,16:17:38.58:176,39,0	0/0:29,0:29:87.29:0,87,1370	0/0:19,0:19:54.17:0,54,840	0/0:28,0:28:84.29:0,84,1336	1/1:0,19:19:30.91:160,31,0	1/1:0,11:11:26.60:112,27,0	0/0:24,0:24:72.25:0,72,1151	0/0:21,0:21:60.18:0,60,902	0/0:31,0:31:93.30:0,93,1461	1/1:0,5:5:14.47:79,14,0	0/0:23,0:23:69.24:0,69,1094	0/0:19,0:19:57.19:0,57,907	0/0:39,0:39:99:0,114,1811	1/1:2,15:17:25.64:103,26,0	1/1:1,8:9:9.72:39,10,0	1/1:0,14:14:26.37:111,26,0	1/1:0,11:11:27.49:123,27,0	0/0:15,0:15:45.15:0,45,719	0/0:14,0:14:42.14:0,42,671	0/0:13,0:13:39.12:0,39,600
chr10	102997887	.	AGG	A	4712.98	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=16.969;DP=524;FS=4.401;HRun=3;HaplotypeScore=129.0968;InbreedingCoeff=0.9940;MQ=82.92;MQ0=0;MQRankSum=-16.038;QD=30.80;ReadPosRankSum=3.279;VQSLOD=4.6635;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:54.17:651,54,0	1/1:0,6:6:18.05:211,18,0	0/0:23,0:23:44.36:0,44,1101	0/0:15,0:15:35.90:0,36,677	0/0:25,0:25:75.25:0,75,1417	1/1:0,11:11:33.10:402,33,0	1/1:2,10:12:33.07:380,33,0	0/0:29,0:29:84.26:0,84,1479	1/1:1,16:17:48.13:564,48,0	0/0:30,0:30:87.30:0,87,1672	0/0:19,0:19:57.20:0,57,1100	0/0:27,0:27:81.28:0,81,1551	1/1:0,19:19:51.13:592,51,0	1/1:0,11:11:30.09:366,30,0	0/0:24,0:24:69.24:0,69,1333	0/0:19,0:19:57.20:0,57,1100	0/0:35,0:35:99:0,105,2021	1/1:1,5:6:15.05:192,15,0	0/0:22,0:22:66.23:0,66,1264	0/0:20,0:20:57.17:0,57,1036	0/0:38,0:38:99:0,111,2001	1/1:0,16:16:39.08:451,39,0	1/1:0,9:9:14.83:152,15,0	1/1:1,14:15:33.09:383,33,0	1/1:0,11:11:30.09:368,30,0	0/0:17,0:17:51.17:0,51,980	0/0:15,0:15:45.14:0,45,837	0/0:13,0:13:39.13:0,39,753
chr10	102998832	.	TG	T	6646.21	PASS	AB=0.963;AC=26;AF=0.464;AN=56;BaseQRankSum=4.786;DP=693;FS=4.377;HRun=10;HaplotypeScore=87.7756;InbreedingCoeff=0.8545;MQ=66.46;MQ0=0;MQRankSum=-0.944;QD=18.16;ReadPosRankSum=7.182;VQSLOD=4.9374;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,34:38:86.98:755,87,0	1/1:1,13:14:41.99:364,42,0	0/1:26,1:23:26.50:27,0,288	0/0:12,0:10:16.32:0,16,198	0/0:26,2:29:19.88:0,20,641	1/1:4,16:20:17.81:384,18,0	1/1:6,19:25:44.99:391,45,0	0/0:15,0:21:24.06:0,24,174	1/1:3,24:27:65.97:573,66,0	0/0:27,2:29:11.04:0,11,571	0/0:26,0:26:47.53:0,48,534	0/0:25,0:25:48.08:0,48,504	1/1:1,18:19:53.99:469,54,0	1/1:0,31:31:86.98:755,87,0	0/0:19,1:20:12.92:0,13,354	0/0:17,0:17:36.08:0,36,383	0/0:13,0:40:72.17:0,72,477	1/1:2,28:30:74.98:651,75,0	0/0:21,1:23:18.90:0,19,420	0/0:13,0:25:32.79:0,33,253	0/0:10,0:15:26.31:0,26,188	1/1:6,24:30:68.98:599,69,0	1/1:6,22:28:56.98:494,57,0	1/1:3,17:20:47.98:417,48,0	1/1:2,29:32:89.02:761,89,0	0/1:24,1:25:7.09:7,0,353	0/0:12,0:29:28.91:0,29,185	0/0:16,0:16:39.11:0,39,431
chr10	102999188	.	C	CAAATATGT	25698.54	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=3.118;DP=641;FS=4.842;HRun=0;HaplotypeScore=167.8802;InbreedingCoeff=0.9996;MQ=76.17;MQ0=0;MQRankSum=-19.412;QD=95.18;ReadPosRankSum=1.230;VQSLOD=5.6048;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,17:42:75.26:3207,75,0	1/1:3,12:15:45.15:1855,45,0	0/0:23,0:23:60.18:0,60,1491	0/0:20,0:20:51.14:0,51,1185	0/0:10,0:10:30.10:0,30,849	1/1:3,15:22:51.18:2217,51,0	1/1:12,10:25:54.19:2130,54,0	0/0:24,0:24:66.23:0,66,1812	1/1:8,13:21:54.19:2338,54,0	0/0:24,0:24:72.24:0,72,1940	0/0:13,0:13:33.11:0,33,919	0/0:26,0:26:72.22:0,72,1840	1/1:6,19:28:72.25:3144,72,0	1/1:11,13:26:66.23:2795,66,0	0/0:30,0:30:84.29:0,84,2288	0/0:23,0:23:66.18:0,66,1654	0/0:31,0:31:87.26:0,87,2326	1/1:6,11:19:42.14:1803,42,0	0/0:21,0:21:57.20:0,57,1583	0/0:24,0:24:63.20:0,63,1683	0/0:48,0:48:99:0,135,3777	1/1:7,7:15:33.11:1298,33,0	1/1:3,12:17:39.61:1677,40,0	1/1:4,11:17:30.10:1252,30,0	1/1:7,13:22:48.16:1981,48,0	0/0:18,0:18:48.16:0,48,1351	0/0:27,0:26:78.25:0,78,2146	0/0:9,0:9:27.09:0,27,746
chr10	103000504	.	G	GC	14975.05	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=18.966;DP=756;FS=7.574;HRun=1;HaplotypeScore=122.4850;InbreedingCoeff=0.9998;MQ=85.65;MQ0=0;MQRankSum=1.119;QD=41.71;ReadPosRankSum=3.321;VQSLOD=3.7562;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,64:64:99:2830,190,0	1/1:0,10:10:30.10:449,30,0	0/0:27,0:27:66.18:0,66,812	0/0:23,0:23:60.07:0,60,702	0/0:19,0:19:54.16:0,54,685	1/1:0,19:19:54.18:807,54,0	1/1:5,40:45:99:1683,114,0	0/0:18,0:18:51.17:0,51,660	1/1:2,23:25:69.23:1034,69,0	0/0:23,0:23:63.20:0,63,817	0/0:21,0:21:54.13:0,54,682	0/0:29,0:29:87.27:0,87,1115	1/1:1,24:25:63.15:943,63,0	1/1:0,25:25:72.24:1077,72,0	0/0:32,0:32:93.30:0,93,1206	0/0:27,0:27:72.23:0,72,933	0/0:38,0:38:99:0,108,1369	1/1:1,38:39:99:1662,111,0	0/0:14,0:14:39.08:0,39,487	0/0:18,0:18:54.16:0,54,686	0/0:46,0:46:99:0,132,1668	1/1:2,29:31:84.28:1255,84,0	1/1:0,11:11:30.10:449,30,0	1/1:0,44:44:99:1842,123,0	1/1:0,21:21:63.21:944,63,0	0/0:30,0:30:90.29:0,90,1166	0/0:20,0:20:60.19:0,60,771	0/0:12,0:12:36.12:0,36,466
chr10	103001102	.	GTGTA	G	6336.42	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=17.737;DP=549;FS=0.348;HRun=0;HaplotypeScore=187.2749;InbreedingCoeff=0.9894;MQ=65.10;MQ0=0;MQRankSum=-16.380;QD=32.00;ReadPosRankSum=4.088;VQSLOD=4.8977;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,15:24:40.35:532,40,0	1/1:2,8:10:30.02:411,30,0	0/0:19,0:19:57.14:0,57,1136	0/0:22,0:20:36.52:0,37,1010	0/0:25,0:25:72.25:0,72,1883	1/1:5,19:24:62.63:845,63,0	1/1:3,14:17:45.07:598,45,0	0/0:35,0:35:99:0,99,2607	1/1:3,17:20:48.15:715,48,0	0/0:30,0:30:90.30:0,90,2361	0/0:19,0:19:54.19:0,54,1462	0/0:15,0:15:45.15:0,45,1260	1/1:7,5:12:20.99:273,21,0	1/1:4,19:23:63.20:938,63,0	0/0:19,0:19:57.20:0,57,1530	0/0:16,0:16:48.15:0,48,1250	0/0:28,0:28:84.29:0,84,2318	1/1:5,3:8:20.93:229,21,0	0/0:17,0:17:51.16:0,51,1270	0/0:21,0:21:63.22:0,63,1806	0/0:28,0:28:84.27:0,84,2298	1/1:2,12:14:39.06:527,39,0	1/1:7,11:18:35.99:429,36,0	1/1:4,4:8:8.99:125,9,0	1/1:4,16:20:48.14:715,48,0	0/0:23,0:23:69.24:0,69,1904	0/0:28,0:28:84.29:0,84,2345	0/0:6,0:6:18.06:0,18,479
chr10	103001105	.	TA	T	848.48	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=15.603;DP=549;FS=3.925;HRun=2;HaplotypeScore=171.8873;InbreedingCoeff=0.8095;MQ=65.00;MQ0=0;MQRankSum=-15.569;QD=4.51;ReadPosRankSum=6.846;VQSLOD=0.6409;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:1.76:51,2,0	1/1:10,0:10:20.06:71,20,0	0/0:18,0:18:13.04:0,13,535	0/0:22,0:20:13.22:0,13,431	0/0:26,0:26:75.25:0,75,1124	1/1:22,1:23:43.84:204,44,0	0/1:16,0:16:0.34:60,0,0	0/0:34,0:34:99:0,99,1448	1/1:19,0:19:28.27:119,28,0	0/0:31,0:31:87.29:0,87,1284	0/0:19,0:19:54.18:0,54,808	0/0:15,0:15:45.15:0,45,674	1/1:12,0:12:12.48:44,12,0	1/1:22,1:23:53.36:218,53,0	0/0:20,0:20:60.20:0,60,897	0/0:16,0:16:45.15:0,45,675	0/0:28,0:28:84.24:0,84,1234	1/1:5,1:6:3.38:15,3,0	0/0:21,0:21:57.17:0,57,816	0/0:21,0:21:63.21:0,63,944	0/0:29,0:29:87.28:0,87,1285	1/1:14,0:14:12.33:69,12,0	0/1:17,0:17:12.71:34,0,13	1/1:6,2:8:8.47:52,8,0	1/1:19,0:19:28.21:119,28,0	0/0:24,0:24:72.03:0,72,1048	0/0:31,0:31:93.32:0,93,1392	0/0:6,0:6:18.06:0,18,270
chr10	103001109	.	TATGTATCCCA	T	11590.41	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=17.367;DP=516;FS=5.005;HRun=0;HaplotypeScore=222.3874;InbreedingCoeff=0.9724;MQ=65.67;MQ0=0;MQRankSum=-16.412;QD=77.79;ReadPosRankSum=5.822;VQSLOD=4.4379;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:39.13:1024,39,0	1/1:0,8:8:24.08:687,24,0	0/0:17,0:17:29.32:0,29,1015	0/0:19,0:17:8.95:0,9,1122	0/0:27,0:27:75.24:0,75,3727	1/1:1,19:20:60.20:1587,60,0	1/1:1,13:14:42.14:1143,42,0	0/0:34,0:34:96.32:0,96,4871	1/1:0,17:17:48.16:1349,48,0	0/0:31,0:31:93.32:0,93,4823	0/0:19,0:19:54.19:0,54,2887	0/0:16,0:16:48.16:0,48,2472	1/1:0,5:5:15.05:427,15,0	1/1:2,19:21:63.21:1697,63,0	0/0:22,0:22:66.23:0,66,3367	0/0:15,0:15:45.14:0,45,2284	0/0:29,0:29:84.29:0,84,4337	1/1:1,3:4:9.03:261,9,0	0/0:21,0:21:63.22:0,63,3312	0/0:23,0:23:69.24:0,69,3606	0/0:28,0:28:84.29:0,84,4430	1/1:0,12:12:36.12:987,36,0	1/1:0,11:11:33.11:865,33,0	1/1:2,4:6:8.83:215,9,0	1/1:0,16:16:48.16:1348,48,0	0/0:25,0:25:75.26:0,75,3892	0/0:32,0:32:96.33:0,96,5023	0/0:9,0:9:27.09:0,27,1371
chr10	103001161	.	G	GGTTTGGACTA	27570.07	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-3.437;DP=655;FS=20.797;HRun=0;HaplotypeScore=217.4748;InbreedingCoeff=0.9991;MQ=71.52;MQ0=0;MQRankSum=-19.270;QD=98.46;ReadPosRankSum=-0.773;VQSLOD=3.2281;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,15:28:54.18:2423,54,0	1/1:3,5:11:21.07:877,21,0	0/0:23,0:23:66.16:0,66,1892	0/0:19,0:19:45.54:0,46,1226	0/0:32,0:32:93.30:0,93,2934	1/1:6,17:31:69.24:3267,69,0	1/1:6,12:24:51.17:2361,51,0	0/0:27,0:27:78.23:0,78,2043	1/1:5,17:28:63.21:2919,63,0	0/0:29,0:29:87.28:0,87,2680	0/0:21,0:21:54.17:0,54,1698	0/0:19,0:19:54.17:0,54,1629	1/1:1,9:18:27.09:1451,27,0	1/1:8,11:28:57.19:2480,57,0	0/0:20,0:20:60.19:0,60,1907	0/0:19,0:19:57.20:0,57,1906	0/0:21,0:21:63.19:0,63,2040	1/1:2,10:15:33.11:1654,33,0	0/0:20,0:20:57.18:0,57,1594	0/0:29,0:29:84.27:0,84,2752	0/0:22,0:22:63.22:0,63,2026	1/1:2,18:24:60.20:2976,60,0	1/1:4,17:24:60.20:2735,60,0	1/1:3,9:13:27.05:1047,27,0	1/1:11,19:36:81.27:3380,81,0	0/0:30,0:30:87.30:0,87,2904	0/0:33,0:32:96.23:0,96,2780	0/0:11,0:11:33.11:0,33,1108
chr10	103002545	.	G	GA	9184.36	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=-4.394;DP=551;FS=25.460;HRun=0;HaplotypeScore=64.1478;InbreedingCoeff=0.8701;MQ=72.05;MQ0=1;MQRankSum=-2.243;QD=30.31;ReadPosRankSum=5.212;VQSLOD=3.3166;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,50:52:99:1833,126,0	1/1:0,6:6:12.04:176,12,0	0/1:23,0:17:29.31:29,0,323	0/1:25,0:18:4.60:5,0,365	0/0:22,0:22:66.18:0,66,863	1/1:0,18:18:48.16:699,48,0	1/1:3,25:28:66.21:963,66,0	0/0:20,0:20:57.15:0,57,723	1/1:0,17:17:45.15:654,45,0	0/0:21,0:21:60.08:0,60,755	0/0:19,0:19:54.12:0,54,699	0/0:15,0:15:45.12:0,45,579	1/1:0,11:11:30.10:429,30,0	1/1:0,15:15:39.13:567,39,0	0/0:17,0:17:48.13:0,48,621	0/0:12,0:12:36.06:0,36,435	0/0:31,0:31:93.29:0,93,1265	1/1:0,35:35:90.30:1307,90,0	0/0:8,0:8:24.07:0,24,316	0/0:17,0:17:45.08:0,45,542	0/0:16,0:16:42.11:0,42,552	1/1:1,13:14:33.10:465,33,0	1/1:0,16:16:45.15:654,45,0	1/1:2,24:26:60.19:877,60,0	1/1:0,17:17:36.12:526,36,0	0/0:22,0:22:66.21:0,66,902	0/0:15,0:15:45.06:0,45,552	0/0:13,0:13:39.10:0,39,495
chr10	103002705	.	T	TCAGTGGG	12138.43	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=7.652;DP=526;FS=7.211;HRun=0;HaplotypeScore=127.8160;InbreedingCoeff=0.9768;MQ=89.48;MQ0=0;MQRankSum=-15.102;QD=64.57;ReadPosRankSum=-1.379;VQSLOD=4.6494;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,13:19:21.07:681,21,0	1/1:1,5:6:15.05:448,15,0	0/0:25,0:25:57.20:0,57,1383	0/0:22,0:22:62.62:0,63,1359	0/0:13,0:13:36.12:0,36,872	1/1:7,15:22:45.15:1595,45,0	1/1:7,14:23:41.51:1337,42,0	0/0:22,0:22:57.20:0,57,1339	1/1:4,10:14:30.10:987,30,0	0/0:27,0:27:66.22:0,66,1545	0/0:17,0:17:45.14:0,45,1045	0/0:27,0:27:72.23:0,72,1695	1/1:5,15:20:48.16:1699,48,0	1/1:4,9:13:33.11:1071,33,0	0/0:34,0:34:81.28:0,81,1970	0/0:16,0:16:45.14:0,45,1046	0/0:27,0:27:57.20:0,57,1396	1/1:4,2:6:6.02:233,6,0	0/0:11,0:11:30.10:0,30,681	0/0:10,0:10:27.09:0,27,674	0/0:29,0:29:72.25:0,72,1743	1/1:2,12:15:36.12:1396,36,0	1/1:4,10:14:21.07:808,21,0	1/1:5,8:13:11.50:465,11,0	1/1:6,15:22:39.09:1418,39,0	0/0:27,0:27:75.25:0,75,1822	0/0:18,0:18:51.18:0,51,1273	0/0:13,0:13:39.13:0,39,974
chr10	103002772	.	C	CTGTGTGTGTGTGTG	3569.05	PASS	AB=1.000;AC=35;AF=0.648;AN=54;BaseQRankSum=3.133;DP=498;FS=2.568;HRun=0;HaplotypeScore=174.5127;InbreedingCoeff=0.6164;MQ=59.62;MQ0=45;MQRankSum=-5.394;QD=11.19;ReadPosRankSum=-2.999;VQSLOD=1.8900;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:13:3.01:64,3,0	1/1:6,0:7:6:293,6,0	0/1:66,0:25:7.39:7,0,301	0/0:71,0:23:21.12:0,21,298	0/0:11,0:11:18.06:0,18,631	1/1:16,0:14:3.01:131,3,0	1/1:18,0:18:3.47:49,3,0	1/1:17,0:16:14.96:182,15,0	1/1:12,0:13:12.04:484,12,0	0/0:13,0:12:21.04:0,21,558	0/0:9,0:9:9.03:0,9,288	0/0:20,0:20:51.18:0,51,1824	1/1:17,0:17:11.99:324,12,0	1/1:17,0:16:6.02:246,6,0	1/1:32,0:32:19.22:465,19,0	0/0:8,0:8:12.04:0,12,457	1/1:6,7:14:6.49:224,6,0	1/1:6,0:6:3.01:149,3,0	1/1:18,0:16:4.62:416,5,0	1/1:10,0:10:3.01:125,3,0	1/1:22,0:20:5.98:70,6,0	1/1:9,0:9:2.26:24,2,0	0/0:7,0:7:0.47:0,0,1	1/1:7,0:5:0.25:1,0,0	./.	0/0:21,0:20:36.07:0,36,1110	1/1:13,0:12:11.99:315,12,0	0/0:12,0:11:24.08:0,24,952
chr10	103004658	.	T	TAC	562.69	PASS	AB=0.967;AC=24;AF=0.500;AN=48;BaseQRankSum=0.273;DP=536;FS=5.321;HRun=0;HaplotypeScore=117.1978;InbreedingCoeff=0.2031;MQ=58.59;MQ0=7;MQRankSum=-0.643;QD=1.77;ReadPosRankSum=-1.457;VQSLOD=1.9728;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:31:6.62:22,0,7	1/1:10,0:9:9.02:48,9,0	./.	./.	0/1:10,0:11:4.36:4,0,130	./.	0/1:22,0:21:0.07:0,0,0	1/1:24,0:23:5.83:47,6,0	1/1:22,0:21:7.46:49,7,0	0/1:21,0:20:65.17:65,0,158	0/1:12,0:12:10.21:10,0,198	0/0:20,0:23:44.24:0,44,417	1/1:17,0:17:4.98:24,5,0	0/1:16,0:16:0.39:0,0,0	0/1:13,14:28:17.59:335,0,18	0/0:11,0:12:26.27:0,26,258	0/0:31,0:30:34.80:0,35,296	1/1:15,0:14:5.74:30,6,0	0/1:15,0:14:6.68:7,0,26	0/0:13,0:12:3.21:0,3,13	0/0:32,0:32:5.49:0,5,24	1/1:15,0:15:4.44:29,4,0	./.	0/1:23,0:23:0.07:0,0,0	1/1:14,0:13:0.26:1,0,0	0/1:18,0:18:32.96:33,0,219	0/0:17,0:17:8.23:0,8,36	0/0:11,0:8:16.31:0,16,129
chr10	103004686	.	CACACAG	C	868.51	PASS	AB=0.957;AC=28;AF=0.560;AN=50;BaseQRankSum=6.115;DP=561;FS=9.480;HRun=0;HaplotypeScore=143.0001;InbreedingCoeff=0.2902;MQ=47.42;MQ0=11;MQRankSum=-2.245;QD=2.35;ReadPosRankSum=-4.662;VQSLOD=0.2994;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:32:2.46:61,0,2	1/1:8,0:7:3.77:41,4,0	./.	./.	0/0:18,0:17:36.06:0,36,680	./.	1/1:23,0:22:11.31:65,11,0	0/1:9,10:17:25.50:155,0,26	1/1:22,0:21:6.65:57,7,0	0/0:32,0:30:80.70:0,81,1437	0/0:15,0:15:32.77:0,33,931	0/0:24,0:23:36.97:0,37,1305	0/1:20,0:20:20.43:72,0,20	1/1:15,0:15:13.86:69,14,0	0/0:24,0:24:45.07:0,45,904	0/0:12,0:12:30.56:0,31,824	0/1:39,0:38:93.69:94,0,673	0/1:15,0:14:20.91:21,0,36	1/1:18,0:17:3.77:170,4,0	1/1:14,0:14:3.46:26,3,0	0/1:53,0:51:4.65:31,0,5	1/1:17,0:16:3.03:25,3,0	0/1:10,0:9:0.21:0,0,0	1/1:25,0:24:5.43:46,5,0	1/1:17,0:15:3:27,3,0	0/0:24,0:22:61.36:0,61,1198	1/1:10,2:11:8.93:63,9,0	0/1:10,0:7:12.03:12,0,317
chr10	103004688	.	CACAG	C	1536.70	PASS	AB=0.928;AC=30;AF=0.600;AN=50;BaseQRankSum=7.847;DP=552;FS=15.001;HRun=0;HaplotypeScore=132.6630;InbreedingCoeff=0.4940;MQ=47.36;MQ0=11;MQRankSum=-2.791;QD=4.20;ReadPosRankSum=-3.458;VQSLOD=0.3525;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:32:12.24:82,12,0	1/1:8,0:7:10.73:73,11,0	./.	./.	0/0:18,0:17:36.01:0,36,464	./.	1/1:22,0:21:12.01:67,12,0	1/1:19,0:17:10.08:158,10,0	1/1:22,0:21:13.75:72,14,0	0/0:32,0:30:56.65:0,57,1091	0/0:15,0:15:32.60:0,33,689	0/0:24,0:23:36.93:0,37,956	0/1:20,0:20:0.30:73,0,0	1/1:15,0:15:17.11:81,17,0	0/0:24,0:24:44.94:0,45,659	0/0:11,0:11:9.24:0,9,581	0/1:38,0:37:99:277,0,221	0/1:14,0:13:12.17:28,0,12	1/1:7,12:18:9.88:333,10,0	1/1:3,11:14:3.48:58,3,0	0/1:12,40:50:4.56:105,0,5	1/1:17,0:16:7.35:50,7,0	0/1:9,0:8:0.13:0,0,0	1/1:25,0:24:5.94:47,6,0	1/1:17,0:15:3:26,3,0	0/0:24,0:22:38.59:0,39,871	1/1:4,8:11:9.03:170,9,0	0/1:10,0:7:12.04:12,0,244
chr10	103004690	.	CAG	C	1647.23	PASS	AB=1.000;AC=33;AF=0.660;AN=50;BaseQRankSum=8.586;DP=546;FS=19.186;HRun=0;HaplotypeScore=119.6799;InbreedingCoeff=0.6748;MQ=47.32;MQ0=11;MQRankSum=-1.386;QD=4.58;ReadPosRankSum=-2.530;VQSLOD=0.6386;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:31:13.51:87,14,0	1/1:8,0:7:13.31:86,13,0	./.	./.	0/0:18,0:17:27.99:0,28,305	./.	1/1:22,0:21:12.36:68,12,0	1/1:17,0:15:10.05:143,10,0	1/1:21,1:21:16.02:97,16,0	0/0:33,0:31:34.39:0,34,792	0/0:16,0:16:22.26:0,22,483	0/0:24,0:23:30.32:0,30,639	1/1:20,0:20:15.55:90,16,0	1/1:15,0:15:17.65:94,18,0	0/0:24,0:24:35.59:0,36,410	0/0:11,0:11:15.06:0,15,419	1/1:31,7:37:37.53:623,38,0	1/1:14,0:13:9.40:51,9,0	1/1:19,0:18:6.26:218,6,0	1/1:13,0:13:3.46:25,3,0	0/1:51,0:49:4.60:40,0,5	1/1:17,0:16:6.87:50,7,0	0/1:9,0:8:0.07:0,0,0	1/1:25,0:24:5.94:46,6,0	1/1:17,0:15:2.93:26,3,0	0/0:24,0:22:53.56:0,54,643	1/1:11,0:10:8.98:72,9,0	0/1:10,0:7:12.04:12,0,174
chr10	103004703	.	ACGCGCGCGCGCGCG	A	2416.70	PASS	AC=22;AF=0.423;AN=52;BaseQRankSum=7.121;DP=534;FS=0.725;HRun=0;HaplotypeScore=187.6988;InbreedingCoeff=0.8101;MQ=55.56;MQ0=5;MQRankSum=-8.251;QD=12.85;ReadPosRankSum=-0.966;VQSLOD=2.5893;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,16:25:3.01:67,3,0	1/1:1,5:5:9.03:253,9,0	./.	0/0:13,0:6:7.95:0,8,205	0/0:21,0:20:45.15:0,45,2688	./.	1/1:7,8:17:9.24:353,9,0	0/0:24,0:22:17.94:0,18,1986	1/1:9,9:19:12.93:409,13,0	0/0:34,0:33:92.88:0,93,4885	0/0:17,0:17:45.12:0,45,2458	0/0:22,0:21:54.17:0,54,3143	1/1:6,13:20:15.52:573,16,0	1/1:1,10:16:20.72:560,21,0	0/0:19,0:19:42.09:0,42,2250	0/0:10,0:10:30.10:0,30,1851	0/0:37,0:37:79.47:0,79,5457	1/1:2,10:15:12.04:365,12,0	0/0:19,0:19:21.32:0,21,1889	0/0:11,0:11:13.97:0,14,884	0/0:56,0:54:29.26:0,29,1672	1/1:3,11:14:3.71:6,4,0	1/1:1,12:13:0.47:1,0,0	1/1:7,12:22:1.16:3,1,0	1/1:3,10:14:0.94:2,1,0	0/0:25,0:24:68.18:0,68,3496	0/0:12,0:11:12.04:0,12,691	0/0:6,0:4:12.04:0,12,854
chr10	103004957	.	CA	C	8343.69	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=10.274;DP=576;FS=1.010;HRun=3;HaplotypeScore=60.2713;InbreedingCoeff=0.9992;MQ=98.17;MQ0=0;MQRankSum=-8.075;QD=32.59;ReadPosRankSum=4.660;VQSLOD=4.9539;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,47:46:99:1576,129,0	1/1:0,7:7:21.07:260,21,0	0/0:20,0:20:57.17:0,57,762	0/0:43,0:43:99:0,114,1444	0/0:17,0:17:51.17:0,51,729	1/1:0,21:21:63.13:760,63,0	1/1:1,18:19:45.14:557,45,0	0/0:20,0:19:57.17:0,57,771	1/1:1,24:25:63.20:779,63,0	0/0:21,0:21:57.15:0,57,777	0/0:12,0:12:36.12:0,36,515	0/0:20,0:20:54.16:0,54,739	1/1:1,24:25:63.20:779,63,0	1/1:0,21:21:60.15:723,60,0	0/0:21,0:21:63.20:0,63,884	0/0:16,0:16:48.16:0,48,686	0/0:24,1:25:35.06:0,35,861	1/1:0,20:20:51.16:631,51,0	0/0:20,0:20:60.17:0,60,807	0/0:10,0:10:27.09:0,27,386	0/0:27,0:27:72.21:0,72,1005	1/1:2,23:25:60.14:740,60,0	1/1:1,15:16:42.11:520,42,0	1/1:0,17:17:48.07:573,48,0	1/1:1,12:13:36.11:445,36,0	0/0:18,0:18:54.17:0,54,758	0/0:18,0:18:54.18:0,54,773	0/0:12,0:12:36.12:0,36,515
chr10	103005030	.	C	CGT	949.70	PASS	AB=0.961;AC=24;AF=0.462;AN=52;BaseQRankSum=-1.095;DP=567;FS=2.235;HRun=0;HaplotypeScore=100.7315;InbreedingCoeff=0.4230;MQ=71.92;MQ0=11;MQRankSum=0.865;QD=3.39;ReadPosRankSum=-1.628;VQSLOD=2.3920;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:28.47:28,0,30	1/1:5,2:7:3.01:44,3,0	./.	0/1:31,0:25:0:0,0,0	0/0:14,0:14:8.19:0,8,112	1/1:20,0:19:6.01:69,6,0	0/0:22,0:21:2.99:0,3,23	./.	1/1:31,1:32:6:68,6,0	1/1:17,0:17:2.97:20,3,0	0/0:8,0:8:3:0,3,32	0/0:29,0:29:6:0,6,65	1/1:29,0:29:18.34:163,18,0	1/1:24,0:24:5.51:69,6,0	0/0:18,0:21:17.32:0,17,119	0/0:18,0:19:18.34:0,18,175	0/0:24,0:26:0.52:0,1,21	0/1:22,5:27:7.93:227,0,8	0/0:13,0:13:0:0,0,0	0/1:7,0:7:0:0,0,0	0/0:30,0:30:6.62:0,7,29	1/1:9,0:9:3.01:43,3,0	1/1:4,0:4:5.99:49,6,0	1/1:29,1:30:24.01:252,24,0	1/1:13,0:12:6.01:68,6,0	0/0:15,0:15:5.14:0,5,62	0/0:17,0:17:0:0,0,0	0/0:9,0:9:3:0,3,32
chr10	103005114	.	G	GT	4764.50	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-10.775;DP=526;FS=2.905;HRun=1;HaplotypeScore=60.0981;InbreedingCoeff=0.9859;MQ=101.33;MQ0=0;MQRankSum=-3.028;QD=41.07;ReadPosRankSum=0.023;VQSLOD=5.2844;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,1269	0/0:3,0:3:9.03:0,9,117	0/0:34,0:34:96.30:0,96,1215	0/0:28,0:28:81.22:0,81,1009	0/0:15,0:15:45.15:0,45,584	0/0:13,0:13:36.12:0,36,467	0/0:29,0:29:84.27:0,84,1089	1/1:2,21:22:63.19:906,63,0	0/0:15,0:15:45.15:0,45,583	0/0:15,0:15:42.14:0,42,545	0/0:14,0:14:39.13:0,39,506	0/0:16,0:16:48.16:0,48,622	0/0:21,0:21:63.20:0,63,818	0/0:13,0:13:39.13:0,39,506	1/1:3,15:18:45.15:675,45,0	0/0:15,0:15:42.14:0,42,544	0/0:22,0:22:60.19:0,60,778	0/0:13,0:13:33.11:0,33,428	1/1:1,13:14:42.14:630,42,0	1/1:1,9:10:24.08:360,24,0	1/1:2,40:42:99:1790,120,0	0/0:6,0:6:18.06:0,18,233	0/0:13,0:13:36.12:0,36,466	0/0:41,0:41:99:0,111,1441	0/0:13,0:13:36.12:0,36,467	0/0:21,0:21:60.19:0,60,779	1/1:1,8:9:27.09:404,27,0	0/0:13,0:13:39.13:0,39,506
chr10	103005817	.	AAAC	A	9283.05	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=18.902;DP=636;FS=2.151;HRun=0;HaplotypeScore=135.7613;InbreedingCoeff=0.9993;MQ=57.85;MQ0=0;MQRankSum=3.222;QD=36.26;ReadPosRankSum=2.386;VQSLOD=5.7324;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:56.83:753,57,0	1/1:2,7:9:24.07:307,24,0	0/0:25,0:19:41.32:0,41,940	0/0:23,0:21:51.08:0,51,1016	0/0:24,0:24:69.22:0,69,1510	1/1:0,21:21:60.19:895,60,0	1/1:5,16:20:51.10:639,51,0	0/0:27,0:26:69.24:0,69,1534	1/1:4,20:24:66.17:864,66,0	0/0:31,0:31:93.32:0,93,2093	0/0:24,0:24:69.24:0,69,1550	0/0:18,0:18:54.17:0,54,1179	1/1:2,21:23:69.19:969,69,0	1/1:3,8:11:30.07:401,30,0	0/0:25,0:25:72.25:0,72,1636	0/0:26,0:26:78.27:0,78,1741	1/1:2,24:26:69.21:977,69,0	1/1:5,19:24:63.17:896,63,0	0/0:27,0:26:75.26:0,75,1682	0/0:23,0:23:66.23:0,66,1500	0/0:22,0:22:66.21:0,66,1419	1/1:3,20:23:57.16:793,57,0	1/1:2,17:19:51.12:662,51,0	1/1:3,20:23:60.55:853,61,0	1/1:4,7:11:23.85:274,24,0	0/0:35,0:34:93.32:0,93,2091	0/0:34,0:33:96.33:0,96,2180	0/0:16,0:15:45.15:0,45,1021
chr10	103005823	.	G	GTT	12153.31	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=19.039;DP=626;FS=1.330;HRun=0;HaplotypeScore=115.8063;InbreedingCoeff=0.9994;MQ=57.62;MQ0=0;MQRankSum=2.453;QD=48.23;ReadPosRankSum=2.489;VQSLOD=5.9306;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:54.18:955,54,0	1/1:1,8:9:27.09:466,27,0	0/0:26,0:20:60.19:0,60,920	0/0:18,0:16:43:0,43,585	0/0:22,0:22:66.18:0,66,992	1/1:1,21:22:63.17:1125,63,0	1/1:2,16:17:51.16:824,51,0	0/0:27,0:25:69.24:0,69,1112	1/1:3,19:23:69.22:1120,69,0	0/0:31,0:31:93.31:0,93,1487	0/0:24,0:24:66.23:0,66,1077	0/0:17,0:17:51.12:0,51,737	1/1:4,21:25:69.23:1235,69,0	1/1:1,8:9:27.09:462,27,0	0/0:28,0:28:78.22:0,78,1241	0/0:26,0:26:78.27:0,78,1271	1/1:3,24:27:75.20:1274,75,0	1/1:4,19:23:66.23:1224,66,0	0/0:28,0:27:78.24:0,78,1214	0/0:26,0:26:75.26:0,75,1220	0/0:24,0:24:72.23:0,72,1147	1/1:3,20:22:57.19:1015,57,0	1/1:5,17:21:57.17:917,57,0	1/1:4,20:24:65.99:1157,66,0	1/1:1,7:8:24.06:380,24,0	0/0:31,0:30:90.31:0,90,1456	0/0:31,0:30:93.32:0,93,1502	0/0:15,0:14:42.14:0,42,679
chr10	103006131	.	TAGCCCTTCCCCAGTGATTC	T	18240.40	PASS	AB=0.540;AC=22;AF=0.393;AN=56;BaseQRankSum=15.456;DP=541;FS=2.264;HRun=0;HaplotypeScore=303.0243;InbreedingCoeff=0.8385;MQ=58.25;MQ0=1;MQRankSum=-14.221;QD=100.78;ReadPosRankSum=4.974;VQSLOD=3.9812;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:3,17:20:99:2363,0,192	1/1:0,9:9:21.07:1152,21,0	0/0:24,0:18:48.16:0,48,2800	0/0:30,0:24:69.24:0,69,4214	0/0:15,0:15:45.15:0,45,3889	0/1:2,12:14:99:1702,0,209	1/1:8,15:21:36.12:1975,36,0	0/0:23,0:22:60.21:0,60,4476	1/1:4,12:15:23.29:1159,23,0	0/0:17,0:17:47.75:0,48,3933	0/0:15,0:15:45.15:0,45,3837	0/0:28,0:28:81.28:0,81,7332	1/1:2,5:7:9.03:494,9,0	1/1:4,19:22:51.18:2798,51,0	0/0:14,0:14:42.14:0,42,3512	0/0:13,0:13:39.13:0,39,3431	0/0:39,0:39:99:0,105,8071	1/1:4,10:14:27.09:1411,27,0	0/0:18,0:15:36.12:0,36,2710	0/0:20,0:20:60.15:0,60,4448	0/0:49,0:49:99:0,138,11375	1/1:2,11:12:27.09:1333,27,0	1/1:3,14:17:41.86:1954,42,0	1/1:5,10:14:17.83:746,18,0	1/1:2,8:10:21.07:1152,21,0	0/0:16,0:16:45.15:0,45,4139	0/0:25,0:24:75.24:0,75,5802	0/0:13,0:13:39.13:0,39,3130
chr10	103007318	.	T	TCACACACACACA	2091.44	PASS	AB=0.939;AC=23;AF=0.426;AN=54;BaseQRankSum=-1.366;DP=755;FS=0.000;HRun=0;HaplotypeScore=231.4901;InbreedingCoeff=0.0867;MQ=53.46;MQ0=38;MQRankSum=-7.017;QD=4.01;ReadPosRankSum=-4.453;VQSLOD=1.6633;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:36:5.93:6,0,135	./.	1/1:78,0:11:2.22:7,2,0	0/0:89,0:15:3.01:0,3,80	0/0:16,0:14:24.08:0,24,701	0/0:16,0:17:14.93:0,15,205	0/1:40,0:40:6.32:6,0,83	1/1:18,0:18:30.02:544,30,0	0/1:34,0:34:65.83:66,0,179	0/0:17,0:21:29.77:0,30,709	0/0:12,0:13:5.23:0,5,415	0/0:16,0:17:33.10:0,33,807	0/1:18,0:18:50.01:50,0,162	0/1:26,0:26:55.68:56,0,94	0/1:8,0:25:1.32:49,0,1	0/0:24,0:29:53.80:0,54,1410	0/1:28,0:27:31.48:82,0,31	0/1:21,0:21:45.35:45,0,248	1/1:21,0:21:27.69:708,28,0	1/1:6,0:6:2.04:6,2,0	0/1:35,13:62:0:1,0,0	0/0:23,0:23:13.98:0,14,161	0/1:15,0:15:35.98:36,0,59	0/1:38,0:37:23.79:37,0,24	0/1:11,0:12:0:0,0,0	0/1:22,0:26:2.95:3,0,422	1/1:17,0:16:21.01:549,21,0	0/0:5,0:5:9.01:0,9,185
chr10	103007352	.	A	ACACC	2511.90	PASS	AB=0.948;AC=20;AF=0.370;AN=54;BaseQRankSum=2.363;DP=756;FS=18.367;HRun=0;HaplotypeScore=162.3497;InbreedingCoeff=0.2599;MQ=61.04;MQ0=25;MQRankSum=-6.777;QD=6.51;ReadPosRankSum=-0.564;VQSLOD=1.6025;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,3:42:59.08:258,0,59	0/0:6,0:6:5.81:0,6,32	0/0:48,0:20:50.22:0,50,522	0/0:62,0:26:65.79:0,66,690	0/0:19,0:19:50.89:0,51,649	1/1:14,1:18:3.84:144,4,0	1/1:31,5:36:16.54:303,17,0	0/1:35,0:34:30.15:30,0,415	0/1:20,4:25:37.11:342,0,37	0/0:31,0:31:80.04:0,80,888	0/0:18,0:18:41.81:0,42,531	0/0:21,0:21:59.90:0,60,788	0/1:16,2:20:65.44:220,0,65	0/1:21,1:22:64.11:64,0,116	0/1:27,0:27:68.46:68,0,203	0/0:27,0:27:72:0,72,1094	0/1:26,0:25:17.73:18,0,67	1/1:18,6:25:11.55:664,12,0	0/0:33,0:33:22.27:0,22,499	0/0:7,0:10:11.98:0,12,100	0/0:49,0:47:47.83:0,48,393	1/1:21,5:26:15.28:286,15,0	1/1:20,2:23:0.64:39,1,0	1/1:32,6:37:11.79:236,12,0	./.	0/0:25,0:24:68.98:0,69,734	0/1:19,0:22:18.44:18,0,191	0/0:8,0:8:20.94:0,21,218
chr10	103007353	.	CCTAG	C	2351.40	PASS	AB=0.806;AC=18;AF=0.321;AN=56;BaseQRankSum=10.742;DP=726;FS=0.999;HRun=0;HaplotypeScore=147.3877;InbreedingCoeff=-0.2669;MQ=61.93;MQ0=25;MQRankSum=-10.122;QD=5.17;ReadPosRankSum=0.788;VQSLOD=2.6244;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:42:7.17:7,0,240	1/1:0,6:6:9.03:149,9,0	0/0:45,0:20:39.10:0,39,1059	0/1:57,0:25:12.30:12,0,1307	0/0:18,0:18:51.18:0,51,1299	0/1:6,11:17:34.82:35,0,245	0/1:34,0:34:5.92:6,0,197	0/1:24,5:28:99:158,0,1569	0/1:23,3:26:99:161,0,148	0/0:32,0:32:96.33:0,96,2345	0/0:17,0:17:42.14:0,42,1105	0/0:21,0:21:63.20:0,63,1581	0/1:6,14:20:47.18:474,0,47	0/1:19,2:21:99:245,0,101	0/0:26,0:26:2.98:0,3,808	0/0:26,0:26:69.23:0,69,1699	0/1:4,19:24:28.16:389,0,28	0/1:10,12:25:99:446,0,338	0/1:24,4:32:99:252,0,1517	0/0:10,0:10:11.91:0,12,309	0/0:42,0:40:53.93:0,54,1282	0/1:20,3:23:44.47:44,0,69	0/1:22,1:23:19.11:19,0,36	0/1:29,7:35:36.97:37,0,87	0/1:2,11:13:0:0,0,0	0/0:25,0:24:75.26:0,75,1784	0/1:19,0:22:75.34:75,0,976	0/0:8,0:8:21.05:0,21,457
chr10	103007354	.	CTAGACGCACACACATA	C	6038.69	PASS	AB=0.690;AC=22;AF=0.393;AN=56;BaseQRankSum=9.250;DP=717;FS=2.508;HRun=0;HaplotypeScore=238.7109;InbreedingCoeff=0.6899;MQ=63.63;MQ0=24;MQRankSum=-10.569;QD=20.20;ReadPosRankSum=-2.705;VQSLOD=3.4744;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:5,34:39:28.75:119,0,29	1/1:6,0:6:18.02:404,18,0	0/0:47,0:22:66.22:0,66,2567	0/0:57,0:26:71.47:0,71,3103	0/0:19,0:19:54.14:0,54,2823	1/1:17,0:17:36.01:515,36,0	1/1:6,24:31:19.49:189,19,0	0/0:30,0:29:78.30:0,78,2683	1/1:9,17:26:16.15:543,16,0	0/0:33,0:33:99:0,99,4673	0/0:17,0:17:42.14:0,42,2640	0/0:21,0:21:60.19:0,60,3206	1/1:19,0:19:38.75:1163,39,0	0/1:5,15:20:8.93:448,0,9	0/0:26,0:26:34.55:0,35,1719	0/0:27,0:27:72.67:0,73,3607	0/1:25,0:24:13.24:600,0,13	1/1:24,0:25:69.01:1382,69,0	0/0:31,0:31:83.93:0,84,3309	0/0:11,0:11:17.93:0,18,767	0/0:42,0:40:56.94:0,57,2746	1/1:8,13:21:14.87:409,15,0	1/1:7,16:23:5.55:39,6,0	0/1:16,18:33:7.66:109,0,8	1/1:13,0:13:9.03:119,9,0	0/0:25,0:24:75.16:0,75,3643	0/0:25,0:24:57.19:0,57,2725	0/0:6,0:6:18.06:0,18,1115
chr10	103007356	.	AGACG	A	1253.40	PASS	AB=0.974;AC=14;AF=0.250;AN=56;BaseQRankSum=11.876;DP=713;FS=0.000;HRun=0;HaplotypeScore=151.3982;InbreedingCoeff=-0.0909;MQ=67.55;MQ0=20;MQRankSum=-11.458;QD=4.46;ReadPosRankSum=2.433;VQSLOD=2.2597;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:12.04:0,12,270	1/1:6,0:6:8.52:91,9,0	0/0:47,0:25:33.75:0,34,1550	0/0:56,0:30:83.99:0,84,2007	0/0:18,0:18:51.18:0,51,1386	0/1:17,0:17:17.14:17,0,279	0/0:31,0:31:12.58:0,13,228	0/1:33,0:32:51.73:52,0,2023	0/1:26,0:26:75.01:75,0,137	0/0:33,0:33:96.06:0,96,2596	0/0:17,0:17:42.14:0,42,1179	0/0:20,0:20:60.21:0,60,1572	0/1:19,0:19:44.02:306,0,44	0/1:19,0:19:20.94:128,0,21	0/0:26,0:26:20.61:0,21,1003	0/0:26,0:26:69.20:0,69,1825	0/1:22,2:24:25.63:240,0,26	0/1:23,1:24:99:239,0,442	0/1:28,3:31:99:172,0,1715	0/0:12,0:12:17.92:0,18,517	0/0:41,0:39:57.20:0,57,1633	0/1:21,0:21:28.62:29,0,63	0/1:23,0:23:0.90:1,0,69	0/0:33,0:32:5.86:0,6,118	0/1:13,0:13:0:0,0,0	0/0:25,0:24:75.11:0,75,1880	0/1:22,3:24:54.50:55,0,1319	0/0:6,0:6:18.06:0,18,521
chr10	103007361	.	CACACACATA	C	1350.82	PASS	AB=0.921;AC=12;AF=0.214;AN=56;BaseQRankSum=10.489;DP=712;FS=8.347;HRun=0;HaplotypeScore=202.3666;InbreedingCoeff=-0.0817;MQ=71.10;MQ0=11;MQRankSum=-10.837;QD=5.61;ReadPosRankSum=0.539;VQSLOD=1.8499;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:39:5.11:5,0,129	0/1:8,0:8:56.77:88,0,57	0/0:48,0:32:96.33:0,96,4040	0/0:51,0:31:93.32:0,93,4079	0/0:18,0:18:54.19:0,54,2491	0/1:18,2:20:99:113,0,167	0/0:29,0:29:14.77:0,15,96	0/0:36,0:36:99:0,105,3974	0/1:24,2:26:38.12:205,0,38	0/0:33,0:33:99:0,99,4474	0/0:17,0:17:45.15:0,45,2187	0/0:21,0:21:63.22:0,63,2748	0/1:14,3:17:23.72:343,0,24	0/1:16,2:18:67.71:115,0,68	0/0:28,0:28:41.83:0,42,1929	0/0:24,0:24:66.23:0,66,3049	0/1:26,0:26:99:137,0,132	0/1:23,4:27:99:295,0,545	0/0:30,0:30:83.51:0,84,3355	0/0:15,0:15:29.31:0,29,1193	0/0:45,0:44:63.69:0,64,3075	0/1:17,3:20:24.47:131,0,24	0/0:22,0:22:2.73:0,3,53	0/1:27,4:31:10.63:11,0,33	1/1:9,0:9:8.90:60,9,0	0/0:22,0:21:66.23:0,66,3198	0/0:25,0:24:57.13:0,57,2509	0/0:7,0:7:21.07:0,21,1017
chr10	103008195	.	A	AACAAGT	21658.58	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-5.669;DP=691;FS=1.738;HRun=0;HaplotypeScore=143.5094;InbreedingCoeff=0.9914;MQ=76.67;MQ0=0;MQRankSum=-19.563;QD=78.47;ReadPosRankSum=2.116;VQSLOD=5.6174;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,29:42:84.29:2854,84,0	1/1:0,4:4:9.03:301,9,0	0/0:24,0:24:66.22:0,66,1451	0/0:15,0:15:33.06:0,33,718	0/0:19,0:19:54.19:0,54,1277	1/1:0,14:15:39.13:1385,39,0	1/1:4,17:22:60.21:2068,60,0	0/0:29,0:29:75.23:0,75,1662	1/1:11,22:35:81.24:2663,81,0	0/0:31,0:31:81.25:0,81,1739	0/0:17,0:17:45.14:0,45,999	0/0:36,0:36:99:0,108,2481	1/1:3,11:15:39.13:1320,39,0	1/1:8,20:30:78.27:2645,78,0	0/0:25,0:25:75.24:0,75,1726	0/0:30,0:30:84.27:0,84,1908	1/1:4,17:22:48.16:1616,48,0	1/1:3,9:13:36.12:1280,36,0	0/0:34,0:34:99:0,99,2105	0/0:29,0:29:87.30:0,87,2026	0/0:53,0:53:99:0,153,3445	1/1:3,15:18:51.09:1638,51,0	1/1:5,7:14:21.07:745,21,0	1/1:10,16:27:42.62:1477,43,0	1/1:5,14:19:51.13:1667,51,0	0/0:31,0:31:90.29:0,90,2040	0/0:25,0:25:72.23:0,72,1644	0/0:17,0:17:45.15:0,45,1063
chr10	103008560	.	T	TC	13354	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=16.947;DP=607;FS=5.564;HRun=0;HaplotypeScore=126.1784;InbreedingCoeff=1.0000;MQ=80.96;MQ0=0;MQRankSum=-8.302;QD=43.93;ReadPosRankSum=2.519;VQSLOD=3.9492;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:25:75.26:1196,75,0	1/1:1,15:16:45.11:688,45,0	0/0:18,0:18:50.79:0,51,632	0/0:18,0:18:38.18:0,38,659	0/0:20,0:20:57.19:0,57,793	1/1:2,15:17:45.15:718,45,0	1/1:2,32:34:96.26:1531,96,0	0/0:27,0:26:81.26:0,81,1117	1/1:2,27:29:75.26:1195,75,0	0/0:19,0:19:57.19:0,57,784	0/0:14,0:14:39.10:0,39,506	0/0:17,0:17:51.17:0,51,713	1/1:1,28:29:84.29:1337,84,0	1/1:1,19:20:57.19:907,57,0	0/0:24,0:24:63.21:0,63,881	0/0:23,0:23:69.23:0,69,965	1/1:0,29:29:81.28:1294,81,0	1/1:1,28:29:81.28:1294,81,0	0/0:15,0:15:42.14:0,42,588	0/0:23,0:23:69.21:0,69,933	0/0:31,0:30:87.27:0,87,1198	1/1:0,16:16:45.15:704,45,0	1/1:2,13:15:45.13:689,45,0	1/1:0,25:25:59.25:953,59,0	1/1:1,18:19:54.18:848,54,0	0/0:18,0:18:54.18:0,54,755	0/0:23,0:23:63.11:0,63,881	0/0:13,0:13:39.13:0,39,545
chr10	103008620	.	A	AC	2838.08	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=17.984;DP=609;FS=0.332;HRun=0;HaplotypeScore=263.4497;InbreedingCoeff=0.9491;MQ=47.30;MQ0=3;MQRankSum=-14.249;QD=11.09;ReadPosRankSum=7.015;VQSLOD=3.3806;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,7:19:22.55:164,23,0	1/1:13,7:20:41.65:307,42,0	0/0:28,0:18:32.32:0,32,456	0/0:12,0:9:1.02:0,1,199	0/0:25,0:25:60.97:0,61,798	1/1:9,9:17:35.32:227,35,0	1/1:20,8:28:47.54:324,48,0	0/0:20,0:19:41.48:0,41,296	1/1:21,8:29:66.35:417,66,0	0/0:32,0:31:90.22:0,90,1136	0/0:24,0:24:63.99:0,64,779	0/0:13,0:13:39.02:0,39,415	1/1:19,4:23:54.63:330,55,0	1/1:14,7:21:34.16:235,34,0	0/0:24,0:24:59.93:0,60,770	0/0:23,0:23:52.39:0,52,626	0/0:26,0:24:32.73:0,33,274	1/1:15,6:20:44.30:341,44,0	0/0:20,0:19:48.76:0,49,419	0/0:16,0:16:31.60:0,32,249	0/0:13,0:12:29.41:0,29,228	1/1:11,6:17:39.16:254,39,0	1/1:15,7:22:22.71:175,23,0	1/1:13,8:20:4.98:126,5,0	1/1:11,5:15:28.26:163,28,0	0/0:32,0:32:96.17:0,96,1121	0/0:23,0:22:62.30:0,62,485	0/0:22,0:22:58.99:0,59,652
chr10	103008623	.	A	AAC	3607.16	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=18.177;DP=605;FS=2.780;HRun=0;HaplotypeScore=272.0548;InbreedingCoeff=0.8846;MQ=47.16;MQ0=3;MQRankSum=-15.749;QD=13.12;ReadPosRankSum=6.283;VQSLOD=3.2781;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,7:21:21.48:221,21,0	1/1:13,7:20:36.88:358,37,0	0/0:26,0:15:26.14:0,26,418	0/0:12,0:9:15.04:0,15,187	0/0:26,0:26:71.72:0,72,866	1/1:9,9:17:9.65:266,10,0	1/1:21,8:29:49.49:410,49,0	0/1:18,0:17:14.17:14,0,120	1/1:20,8:28:69.96:444,70,0	0/0:31,0:30:90.20:0,90,1161	0/0:22,0:22:55.02:0,55,726	0/0:13,0:13:38.99:0,39,416	1/1:18,4:22:46.86:232,47,0	1/1:15,7:22:34.83:238,35,0	0/0:24,0:24:63.18:0,63,816	0/0:22,0:22:50.59:0,51,644	0/0:28,0:26:6.91:0,7,196	1/1:14,6:19:39.44:434,39,0	0/0:19,0:18:41.26:0,41,305	0/0:18,0:18:19.30:0,19,271	0/0:12,0:11:3.57:0,4,162	1/1:11,6:17:21.41:238,21,0	1/1:15,7:22:53.34:329,53,0	1/1:13,8:20:22.16:150,22,0	1/1:11,5:15:41.39:272,41,0	0/0:31,0:31:88.76:0,89,1089	0/0:23,0:22:32.53:0,33,360	0/0:23,0:23:62.96:0,63,689
chr10	103008626	.	AAC	A	3688.12	PASS	AB=0.983;AC=34;AF=0.607;AN=56;BaseQRankSum=12.198;DP=594;FS=9.796;HRun=0;HaplotypeScore=255.9110;InbreedingCoeff=0.8055;MQ=47.31;MQ0=3;MQRankSum=-12.142;QD=10.27;ReadPosRankSum=-1.320;VQSLOD=1.5796;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:18:18.09:98,18,0	1/1:17,0:17:27.57:127,28,0	0/0:25,0:15:4.10:0,4,335	0/0:12,0:8:14.57:0,15,153	0/0:26,0:26:66.01:0,66,873	1/1:17,0:16:19.55:79,20,0	1/1:27,0:27:23.24:158,23,0	1/1:13,8:20:43.22:440,43,0	1/1:25,0:25:40.84:180,41,0	0/0:32,0:31:90.06:0,90,1181	0/0:22,0:22:59.43:0,59,827	0/0:12,0:12:29.54:0,30,382	1/1:18,0:18:21.18:100,21,0	1/1:21,0:21:5.04:79,5,0	0/0:25,0:25:66:0,66,745	0/0:21,0:21:48.04:0,48,646	0/1:27,1:26:42.28:42,0,250	1/1:19,0:18:28.63:162,29,0	1/1:14,4:17:41.13:380,41,0	1/1:11,7:18:46.42:454,46,0	1/1:11,2:12:29.20:276,29,0	1/1:16,0:16:30.42:143,30,0	1/1:22,0:22:16.42:144,16,0	1/1:21,0:20:28.57:117,29,0	0/1:16,0:15:16.18:43,0,16	0/0:32,0:32:83.19:0,83,1087	1/1:12,11:23:63.60:667,64,0	0/0:28,0:28:54.51:0,55,693
chr10	103008627	.	AC	A	6202.68	PASS	AB=0.966;AC=35;AF=0.625;AN=56;BaseQRankSum=15.939;DP=591;FS=1.896;HRun=1;HaplotypeScore=238.7463;InbreedingCoeff=0.9016;MQ=47.39;MQ0=3;MQRankSum=-13.921;QD=17.33;ReadPosRankSum=1.591;VQSLOD=4.8182;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,7:18:43.17:295,43,0	1/1:11,6:17:50.08:346,50,0	0/0:24,1:15:19.75:0,20,292	0/0:12,0:8:4.30:0,4,108	0/0:26,0:26:62.43:0,62,684	1/1:12,5:16:43.95:271,44,0	1/1:16,11:27:72.88:508,73,0	1/1:20,1:20:53.19:390,53,0	1/1:13,12:25:73.06:505,73,0	0/0:32,0:31:87.95:0,88,913	0/0:22,0:22:53.55:0,54,620	0/0:11,0:11:28.02:0,28,272	1/1:6,12:18:49.56:342,50,0	1/1:12,9:21:54.14:335,54,0	0/0:25,0:25:66.06:0,66,689	0/0:20,0:20:47.18:0,47,507	0/1:27,1:26:72.19:72,0,160	1/1:13,6:19:49.58:407,50,0	1/1:16,2:17:45.98:389,46,0	1/1:17,1:18:47.99:350,48,0	1/1:13,0:12:29.43:216,29,0	1/1:10,6:16:47.21:336,47,0	1/1:12,10:22:62.60:438,63,0	1/1:12,9:20:41.71:294,42,0	1/1:12,4:15:40.36:252,40,0	0/0:31,1:32:59.36:0,59,874	1/1:21,1:21:62.15:457,62,0	0/0:28,0:28:43.35:0,43,540
chr10	103008628	.	C	CA	6614.57	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=18.077;DP=591;FS=0.000;HRun=11;HaplotypeScore=241.5897;InbreedingCoeff=0.6936;MQ=47.25;MQ0=3;MQRankSum=-16.543;QD=19.57;ReadPosRankSum=4.108;VQSLOD=2.4570;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,8:19:48.26:532,48,0	1/1:9,8:17:49.96:535,50,0	0/0:24,0:14:32.54:0,33,334	0/0:12,0:8:14.83:0,15,152	0/0:25,0:26:68.78:0,69,751	1/1:8,9:16:45.31:535,45,0	1/1:18,9:27:77.37:738,77,0	0/1:22,0:21:8.45:28,0,8	1/1:16,9:25:73.24:710,73,0	0/0:31,0:30:87.17:0,87,996	0/0:22,0:22:60.16:0,60,704	0/0:10,0:10:30:0,30,324	1/1:13,5:18:45.69:411,46,0	1/1:12,9:21:54.89:512,55,0	0/0:26,0:26:57.17:0,57,679	0/0:20,0:20:48.04:0,48,546	0/1:28,0:26:20.68:21,0,307	1/1:9,11:19:55.37:569,55,0	0/1:18,0:17:3.76:13,0,4	0/1:18,0:18:20.76:21,0,47	0/1:12,0:11:2.31:8,0,2	1/1:10,6:16:46.59:467,47,0	1/1:11,11:22:65.57:655,66,0	1/1:12,9:20:42.85:336,43,0	1/1:5,11:15:44.40:525,44,0	0/0:32,0:32:86.56:0,87,955	0/0:22,0:21:8.29:0,8,29	0/0:28,0:28:56.69:0,57,639
chr10	103008629	.	AAAC	A	4171.34	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=18.624;DP=597;FS=0.000;HRun=0;HaplotypeScore=266.0513;InbreedingCoeff=0.9797;MQ=47.37;MQ0=3;MQRankSum=-16.386;QD=17.38;ReadPosRankSum=5.028;VQSLOD=2.8824;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,2:19:48.44:339,48,0	1/1:14,3:17:48.38:320,48,0	0/0:23,0:14:18.29:0,18,490	0/0:12,0:8:14.40:0,14,203	0/0:27,0:27:68.41:0,68,1382	1/1:14,3:16:44.79:266,45,0	1/1:23,4:27:78.07:553,78,0	0/0:22,0:21:45.89:0,46,325	1/1:21,4:25:68.47:461,68,0	0/0:33,0:32:93.31:0,93,1848	0/0:22,0:22:60.21:0,60,1348	0/0:10,0:10:30.10:0,30,633	1/1:17,1:18:44.71:276,45,0	1/1:19,2:21:40.19:301,40,0	0/0:27,0:27:60.20:0,60,1114	0/0:20,0:20:48.15:0,48,954	0/0:29,0:27:6.31:0,6,835	1/1:20,0:19:54.88:395,55,0	0/0:19,0:18:19.49:0,19,269	0/0:18,0:18:30.99:0,31,268	0/0:14,0:13:30.03:0,30,264	1/1:12,4:16:45.65:336,46,0	1/1:21,1:22:62.34:397,62,0	1/1:21,0:20:41.02:296,41,0	1/1:16,0:15:41.81:230,42,0	0/0:31,0:31:90.29:0,90,1829	0/0:22,0:21:15.70:0,16,341	0/0:28,0:28:62.99:0,63,1222
chr10	103008632	.	C	CA	4055.82	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=18.781;DP=593;FS=1.460;HRun=3;HaplotypeScore=251.4484;InbreedingCoeff=0.9891;MQ=49.56;MQ0=2;MQRankSum=-16.516;QD=16.62;ReadPosRankSum=5.325;VQSLOD=2.9427;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,13:19:47.24:317,47,0	1/1:6,12:18:44.81:297,45,0	0/0:22,0:15:24.07:0,24,279	0/0:11,0:7:9.48:0,9,96	0/0:27,0:27:65.83:0,66,789	1/1:4,13:16:47.08:319,47,0	1/1:9,18:27:70.76:511,71,0	0/0:24,0:23:51.34:0,51,455	1/1:11,15:26:67.85:425,68,0	0/0:33,0:32:90.25:0,90,1062	0/0:22,0:22:60.18:0,60,719	0/0:10,0:10:30.09:0,30,359	1/1:4,14:18:46.40:276,46,0	1/1:6,15:21:58.05:337,58,0	0/0:24,0:24:54.16:0,54,645	0/0:20,0:20:42.04:0,42,487	0/0:28,0:26:13.56:0,14,510	1/1:3,15:18:45.66:359,46,0	0/0:16,0:16:40.74:0,41,389	0/0:20,0:20:46.26:0,46,449	0/0:14,0:13:33.05:0,33,346	1/1:8,9:17:47.24:291,47,0	1/1:7,16:23:58.39:377,58,0	1/1:5,16:20:43.24:289,43,0	1/1:3,14:16:43.11:259,43,0	0/0:30,0:30:86.73:0,87,992	0/0:23,0:23:60.75:0,61,577	0/0:24,0:24:60.10:0,60,706
chr10	103008633	.	AAAC	A	3660.35	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=18.796;DP=596;FS=0.000;HRun=0;HaplotypeScore=270.4060;InbreedingCoeff=0.9760;MQ=49.48;MQ0=2;MQRankSum=-16.486;QD=14.94;ReadPosRankSum=4.367;VQSLOD=2.4436;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,2:19:44.95:277,45,0	1/1:18,0:18:45.28:259,45,0	0/0:22,0:15:31.66:0,32,470	0/0:10,0:7:6.79:0,7,123	0/0:27,0:27:70.98:0,71,1377	1/1:16,1:16:41.02:222,41,0	1/1:25,2:27:69.29:462,69,0	0/0:24,0:23:51.57:0,52,461	1/1:22,4:26:66.98:424,67,0	0/0:32,0:31:92.34:0,92,1817	0/0:22,0:22:60.21:0,60,1353	0/0:10,0:10:30.10:0,30,649	1/1:16,2:18:47.01:287,47,0	1/1:18,3:21:41.20:248,41,0	0/0:23,0:23:54.18:0,54,1016	0/0:20,0:20:42.11:0,42,875	0/0:29,0:27:7.46:0,7,935	1/1:19,0:18:46.02:332,46,0	0/0:16,0:16:40.46:0,40,408	0/0:20,0:20:49.56:0,50,422	0/0:13,0:12:32.07:0,32,343	1/1:15,2:17:45.54:291,46,0	1/1:20,3:23:57.69:303,58,0	1/1:20,1:20:39.74:309,40,0	1/1:17,1:17:45.65:247,46,0	0/0:30,0:30:90.31:0,90,1818	0/0:25,0:24:26.79:0,27,538	0/0:26,0:26:66.22:0,66,1271
chr10	103008636	.	C	CA	5618.53	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=18.837;DP=588;FS=1.451;HRun=3;HaplotypeScore=239.3301;InbreedingCoeff=0.9674;MQ=52.23;MQ0=2;MQRankSum=-16.883;QD=24.01;ReadPosRankSum=3.814;VQSLOD=4.0658;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:45.35:384,45,0	1/1:13,4:17:47.29:467,47,0	0/0:21,0:13:28.65:0,29,254	0/0:10,0:7:0.95:0,1,59	0/0:28,0:28:70.87:0,71,768	1/1:17,0:16:46.91:419,47,0	1/1:21,3:24:67.94:610,68,0	0/0:24,0:23:49.37:0,49,417	1/1:20,4:24:68.34:675,68,0	0/0:32,0:31:86.14:0,86,985	0/0:23,0:23:60.11:0,60,691	0/0:10,0:10:30.09:0,30,356	1/1:14,5:19:50.07:518,50,0	1/1:18,3:21:50.82:456,51,0	0/0:24,0:24:60.03:0,60,655	0/0:19,0:19:35.78:0,36,431	0/0:30,0:28:34.10:0,34,550	1/1:13,5:17:44.36:415,44,0	0/0:15,0:15:41.85:0,42,408	0/0:20,0:20:46.59:0,47,399	0/0:14,0:13:35.74:0,36,345	1/1:15,1:16:46.43:428,46,0	1/1:21,0:21:54.85:446,55,0	1/1:16,3:18:41.58:378,42,0	1/1:16,1:17:49.40:425,49,0	0/0:31,0:31:92.73:0,93,1030	0/0:26,0:25:69.50:0,70,662	0/0:26,0:26:69.14:0,69,817
chr10	103008639	.	AC	A	4576.76	PASS	AB=0.982;AC=34;AF=0.607;AN=56;BaseQRankSum=15.376;DP=584;FS=8.361;HRun=1;HaplotypeScore=239.0595;InbreedingCoeff=0.6630;MQ=52.65;MQ0=2;MQRankSum=-12.718;QD=11.89;ReadPosRankSum=1.654;VQSLOD=3.2316;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,16:20:50.20:353,50,0	1/1:4,12:16:37.46:304,37,0	0/0:20,0:12:1.74:0,2,196	0/0:11,0:7:7.62:0,8,68	0/0:28,0:28:39.44:0,39,648	1/1:3,15:17:47.80:328,48,0	1/1:5,18:23:63.87:451,64,0	0/1:23,0:22:15.39:55,0,15	1/1:8,16:24:59.65:427,60,0	0/0:31,0:30:75.50:0,75,953	0/0:23,0:23:46.53:0,47,641	0/0:10,0:10:30.01:0,30,327	1/1:7,12:19:37.35:296,37,0	1/1:6,15:21:46.45:315,46,0	0/1:24,1:25:22.05:39,0,22	0/0:17,0:17:37.75:0,38,462	0/1:28,1:27:41.13:41,0,54	1/1:7,11:18:42.86:335,43,0	0/1:15,0:15:7.85:8,0,29	1/1:18,1:19:24.49:115,24,0	1/1:14,0:13:14.28:49,14,0	1/1:3,13:16:45.52:336,46,0	1/1:3,18:21:55.80:417,56,0	1/1:7,12:18:32.80:238,33,0	1/1:4,15:18:51.42:391,51,0	0/0:32,0:32:87.61:0,88,844	1/1:26,0:25:11.87:78,12,0	0/0:27,0:27:62.91:0,63,759
chr10	103008640	.	CA	C	2531.27	PASS	AB=0.911;AC=30;AF=0.536;AN=56;BaseQRankSum=8.334;DP=588;FS=1.199;HRun=11;HaplotypeScore=244.2379;InbreedingCoeff=0.3765;MQ=51.76;MQ0=2;MQRankSum=-4.902;QD=6.56;ReadPosRankSum=2.108;VQSLOD=-0.4664;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:13.72:52,14,0	0/1:16,0:16:18.18:38,0,18	0/0:18,1:11:2.04:0,2,183	0/0:11,0:7:8.99:0,9,81	0/0:26,2:29:16.49:0,16,529	1/1:18,0:17:14.09:43,14,0	0/1:23,0:23:10.11:36,0,10	0/1:8,14:21:23.83:263,0,24	0/1:24,0:24:17.91:31,0,18	0/0:31,0:32:80.32:0,80,774	0/0:21,1:23:29.30:0,29,488	0/0:10,0:10:21.05:0,21,224	0/1:20,0:20:26.66:27,0,59	0/1:21,0:21:20:27,0,20	1/1:1,20:25:56.08:417,56,0	0/0:17,0:17:36.54:0,37,375	0/1:16,15:29:2.03:334,0,2	0/1:18,0:18:15.01:36,0,15	1/1:8,7:15:31.38:222,31,0	1/1:4,15:19:21.65:296,22,0	1/1:4,10:13:32.89:260,33,0	1/1:16,0:16:8.16:52,8,0	1/1:21,0:21:8.91:70,9,0	1/1:19,0:18:3.22:31,3,0	1/1:19,0:18:13.92:75,14,0	0/0:32,1:33:50.40:0,50,678	1/1:10,15:25:58.01:417,58,0	0/0:25,1:27:47.56:0,48,718
chr10	103008665	.	G	GT	6654.44	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=16.590;DP=560;FS=0.334;HRun=1;HaplotypeScore=170.1552;InbreedingCoeff=0.9976;MQ=80.13;MQ0=1;MQRankSum=-15.537;QD=31.84;ReadPosRankSum=3.197;VQSLOD=4.5474;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:38.71:419,39,0	1/1:0,13:13:39.04:489,39,0	0/0:19,0:18:45.09:0,45,574	0/0:21,0:20:57.05:0,57,735	0/0:23,0:23:69.20:0,69,917	1/1:0,22:22:63.12:804,63,0	1/1:1,21:22:53.76:669,54,0	0/0:29,0:29:84.27:0,84,1144	1/1:0,17:17:45:576,45,0	0/0:24,0:24:72.21:0,72,971	0/0:16,0:16:48.16:0,48,671	0/0:11,0:11:33.08:0,33,425	1/1:1,14:16:41.87:519,42,0	1/1:0,15:15:41.97:538,42,0	0/0:23,0:23:63.21:0,63,879	0/0:17,0:17:48.16:0,48,668	0/0:23,0:22:59.95:0,60,787	1/1:0,14:14:39.13:521,39,0	0/0:15,0:15:35.99:0,36,463	0/0:26,0:26:75.20:0,75,1021	0/0:20,0:20:57.16:0,57,777	1/1:0,14:14:29.96:364,30,0	1/1:1,20:23:62.67:786,63,0	1/1:1,11:12:14.99:198,15,0	1/1:2,21:23:59.98:772,60,0	0/0:32,0:32:93.28:0,93,1279	0/0:24,0:24:69.23:0,69,962	0/0:28,0:28:84.28:0,84,1173
chr10	103009394	.	T	TC	711.90	PASS	AB=0.930;AC=23;AF=0.411;AN=56;BaseQRankSum=0.417;DP=416;FS=7.867;HRun=10;HaplotypeScore=56.4057;InbreedingCoeff=0.3461;MQ=52.79;MQ0=17;MQRankSum=0.293;QD=4.04;ReadPosRankSum=-1.837;VQSLOD=-0.3058;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:21,2:20:14.95:35,0,15	1/1:6,0:6:9.02:94,9,0	0/0:42,0:18:20.95:0,21,171	0/0:32,0:16:29.36:0,29,223	0/0:18,0:18:8.84:0,9,66	0/1:8,2:10:15.02:36,0,15	0/1:10,2:12:19.34:65,0,19	0/1:16,0:16:10.44:10,0,23	1/1:11,2:13:23.91:205,24,0	0/0:12,0:12:8.92:0,9,74	0/1:3,0:3:0:0,0,0	0/0:8,0:8:14.25:0,14,122	0/1:8,1:9:9.68:35,0,10	0/1:14,0:14:29.37:38,0,29	1/1:10,0:14:14.66:86,15,0	0/0:9,0:9:11.95:0,12,98	0/0:21,0:20:3.58:0,4,20	1/1:9,0:10:2.98:22,3,0	0/0:16,0:16:5.45:0,5,47	0/0:18,0:21:4.76:0,5,47	0/0:19,0:16:7.47:0,7,42	1/1:8,6:14:6.01:63,6,0	1/1:7,7:14:5.59:57,6,0	1/1:8,2:10:9:81,9,0	1/1:2,5:7:6.01:63,6,0	0/0:15,0:16:15.78:0,16,147	0/0:13,1:13:3.92:0,4,55	0/0:9,0:9:11.94:0,12,98
chr10	103009400	.	C	CA	169.42	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=4.207;DP=387;FS=21.435;HRun=0;HaplotypeScore=58.3018;InbreedingCoeff=0.4079;MQ=50.73;MQ0=21;MQRankSum=0.613;QD=4.34;ReadPosRankSum=2.832;VQSLOD=1.6436;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:18:33.89:0,34,274	0/1:6,0:6:3.20:3,0,37	0/0:32,0:11:27.51:0,28,342	0/0:28,0:14:42.07:0,42,510	0/0:16,0:16:36.02:0,36,352	0/0:11,0:11:18.67:0,19,167	0/0:12,0:11:14.54:0,15,156	0/0:15,0:15:30.24:0,30,247	0/0:13,0:12:0.05:0,0,82	0/0:13,0:12:26.98:0,27,276	0/0:3,0:3:6:0,6,52	0/0:9,0:9:23.97:0,24,277	0/0:9,0:9:12.98:0,13,150	0/0:13,0:13:25.70:0,26,231	1/1:6,9:15:23.55:252,24,0	0/0:9,0:9:21.48:0,21,242	0/0:18,0:17:10.60:0,11,98	0/0:10,0:9:10.98:0,11,91	0/0:10,0:10:18.77:0,19,214	0/0:21,0:21:34.67:0,35,299	0/0:17,0:14:20.94:0,21,197	0/1:12,0:12:17.33:17,0,35	0/0:15,0:13:5.45:0,5,63	0/0:12,0:11:2.28:0,2,26	1/1:6,0:6:3.37:10,3,0	0/0:17,0:16:32.76:0,33,358	0/0:13,0:12:27.58:0,28,284	0/0:10,0:9:24.01:0,24,265
chr10	103009403	.	C	CT	237.23	PASS	AB=0.924;AC=14;AF=0.250;AN=56;BaseQRankSum=6.090;DP=391;FS=56.608;HRun=0;HaplotypeScore=66.6367;InbreedingCoeff=0.0342;MQ=49.20;MQ0=25;MQRankSum=-2.329;QD=1.60;ReadPosRankSum=0.770;VQSLOD=-0.4651;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:22:28.65:0,29,215	0/1:6,0:6:12.97:19,0,13	0/0:29,0:10:23.75:0,24,242	0/0:26,0:12:34:0,34,372	0/0:15,0:15:20.97:0,21,207	0/0:11,0:11:5.24:0,5,76	0/0:11,0:10:4.37:0,4,52	0/1:11,5:16:30.61:138,0,31	0/1:13,0:12:14.16:14,0,51	0/0:10,0:9:18:0,18,180	0/0:3,0:3:3:0,3,26	0/0:10,0:10:21.93:0,22,252	0/0:9,0:9:5.77:0,6,52	0/0:13,1:14:16.41:0,16,118	0/1:15,0:16:30.38:39,0,30	0/0:11,0:11:21.50:0,21,232	0/0:19,0:17:6.37:0,6,40	0/0:10,0:9:9.43:0,9,68	0/1:14,0:14:77.42:79,0,77	0/1:21,1:21:31.58:32,0,51	0/1:16,5:18:0.91:1,0,32	1/1:9,0:9:5.33:23,5,0	0/0:13,0:10:0.08:0,0,11	1/1:11,0:11:0.67:8,1,0	1/1:6,0:6:4.72:17,5,0	0/0:17,0:15:4.31:0,4,291	0/1:12,0:12:10.61:11,0,114	0/0:9,0:7:18.02:0,18,205
chr10	103009408	.	CTGTGTGTG	C	601.73	PASS	AC=16;AF=0.333;AN=48;BaseQRankSum=2.926;DP=317;FS=7.430;HRun=0;HaplotypeScore=63.1535;InbreedingCoeff=0.5794;MQ=44.56;MQ0=24;MQRankSum=-4.762;QD=7.08;ReadPosRankSum=2.615;VQSLOD=0.4376;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,1:15:6.02:139,6,0	1/1:2,2:4:2.80:74,3,0	0/0:24,0:8:3.01:0,3,42	0/0:22,0:10:6.02:0,6,118	0/0:10,0:10:18.06:0,18,723	1/1:3,9:12:6.02:151,6,0	1/1:5,3:7:3.01:76,3,0	0/0:14,0:14:10.27:0,10,184	1/1:6,1:6:3.01:76,3,0	0/0:8,0:7:9.03:0,9,289	0/0:3,0:3:3.01:0,3,107	0/0:11,0:11:15.05:0,15,502	./.	1/1:5,1:6:3.01:76,3,0	0/0:19,0:19:18.44:0,18,257	0/0:9,0:9:12.04:0,12,490	1/1:20,0:18:4.51:82,5,0	0/0:6,0:5:0:0,0,0	0/0:12,0:12:10.80:0,11,131	0/0:18,0:17:17.65:0,18,383	0/0:20,0:18:11.60:0,12,180	./.	1/1:8,1:6:3.01:76,3,0	./.	./.	0/0:19,0:17:20.27:0,20,528	0/0:7,0:6:6.02:0,6,135	0/0:7,0:5:3.01:0,3,118
chr10	103011769	.	T	TA	12895.74	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-3.266;DP=564;FS=1.178;HRun=6;HaplotypeScore=61.1708;InbreedingCoeff=0.9413;MQ=67.05;MQ0=0;MQRankSum=-0.244;QD=32.00;ReadPosRankSum=1.510;VQSLOD=5.3058;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,40:41:99:1359,108,0	1/1:2,13:15:39.12:491,39,0	0/0:7,0:6:5.81:0,6,81	0/0:6,0:6:1.07:0,1,13	0/0:39,0:39:99:0,99,1010	1/1:2,24:26:63.20:793,63,0	1/1:0,8:8:21.07:264,21,0	1/1:2,32:34:96.28:1181,96,0	1/1:1,14:15:39.12:491,39,0	0/0:21,0:21:60.13:0,60,606	0/0:22,0:22:63.11:0,63,627	0/0:11,0:11:27.06:0,27,275	1/1:0,17:17:48.15:604,48,0	1/1:1,10:11:33.11:415,33,0	1/1:2,19:21:42.13:528,42,0	0/0:13,0:13:36.07:0,36,361	1/1:1,22:23:57.18:717,57,0	1/1:1,35:36:87.28:1094,87,0	1/1:6,21:27:66.19:816,66,0	1/1:2,32:35:99:1220,99,0	1/1:1,7:8:18.06:226,18,0	1/1:0,8:8:20.98:243,21,0	1/1:0,12:12:24.08:302,24,0	1/1:0,6:6:18.06:226,18,0	1/1:2,25:27:66.21:830,66,0	0/0:34,0:35:90.19:0,90,918	1/1:4,29:33:87.28:1094,87,0	0/0:7,0:7:18.04:0,18,183
chr10	103014095	.	A	ACATGTAATGGCC	42530.30	PASS	AB=0.955;AC=39;AF=0.696;AN=56;BaseQRankSum=-10.600;DP=576;FS=3.027;HRun=0;HaplotypeScore=150.7291;InbreedingCoeff=0.8998;MQ=78.21;MQ0=0;MQRankSum=-17.090;QD=107.94;ReadPosRankSum=1.439;VQSLOD=5.0176;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,12:24:51.18:2741,51,0	1/1:2,4:9:18.06:1083,18,0	0/0:17,0:17:51.18:0,51,1824	0/0:22,0:22:60.21:0,60,2063	0/0:26,0:26:78.27:0,78,2842	1/1:1,13:22:42.14:2620,42,0	1/1:2,10:24:33.11:2048,33,0	1/1:7,2:21:63.18:2164,63,0	1/1:2,12:17:39.13:2433,39,0	0/0:24,0:24:72.24:0,72,2588	0/0:28,0:28:84.29:0,84,3183	0/0:20,0:20:57.18:0,57,2079	1/1:2,8:20:27.09:1681,27,0	1/1:2,13:20:45.15:2563,45,0	1/1:7,18:27:66.23:3825,66,0	0/1:20,1:20:99:124,0,2253	1/1:2,7:13:27.09:1556,27,0	1/1:2,3:9:15.05:829,15,0	1/1:5,7:16:42.11:2162,42,0	1/1:5,11:29:50.98:2354,51,0	1/1:1,5:15:9.03:332,9,0	1/1:3,9:17:39.13:1978,39,0	1/1:1,12:21:41.67:2372,42,0	1/1:3,3:11:14.76:935,15,0	1/1:4,18:27:66.23:3745,66,0	0/0:31,0:31:93.32:0,93,3533	1/1:5,20:30:84.29:4986,84,0	0/0:14,0:14:42.14:0,42,1620
chr10	103014198	.	A	AACACAC	1381.97	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=0.629;DP=609;FS=7.925;HRun=0;HaplotypeScore=141.2591;InbreedingCoeff=0.8860;MQ=64.78;MQ0=8;MQRankSum=-3.394;QD=8.75;ReadPosRankSum=-4.648;VQSLOD=-0.5138;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:41:63.04:0,63,1109	0/0:17,0:17:40.35:0,40,629	1/1:29,0:13:2.69:9,3,0	./.	0/0:20,0:21:32.41:0,32,542	0/0:17,0:21:38.97:0,39,682	0/0:24,0:26:33.07:0,33,489	1/1:22,0:21:27.05:486,27,0	0/0:21,0:23:45.02:0,45,720	0/0:28,0:27:47.57:0,48,656	0/0:14,0:16:27.07:0,27,482	0/0:20,0:20:18.15:0,18,746	0/0:19,0:19:24.53:0,25,640	0/0:15,0:15:33.01:0,33,509	0/0:9,0:18:11.67:0,12,133	0/0:14,0:15:30.07:0,30,514	0/0:7,0:14:6.02:0,6,84	0/0:19,0:21:33.05:0,33,582	1/1:14,0:15:15.47:182,15,0	1/1:9,14:28:3.01:98,3,0	1/1:32,0:33:20.84:346,21,0	0/0:18,0:18:39.06:0,39,631	0/0:10,0:10:21.07:0,21,381	0/0:29,0:29:47.83:0,48,871	0/0:16,0:18:42.13:0,42,779	0/0:17,0:18:36.02:0,36,602	1/1:14,10:30:15.94:428,16,0	0/0:15,0:15:18.44:0,18,394
chr10	103015069	.	TGA	T	8966.66	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=2.621;DP=1070;FS=18.620;HRun=0;HaplotypeScore=188.4795;InbreedingCoeff=1.0000;MQ=63.03;MQ0=2;MQRankSum=-0.549;QD=32.97;ReadPosRankSum=-0.164;VQSLOD=4.5734;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:47:99:0,114,2074	0/0:13,0:13:39.09:0,39,698	0/0:41,0:29:74.34:0,74,1186	0/0:43,0:40:80.66:0,81,1375	0/0:22,0:22:66.19:0,66,1164	0/0:32,0:32:69.24:0,69,1321	0/0:48,0:48:99:0,123,2166	1/1:1,40:41:99:1631,119,0	0/0:46,0:46:99:0,111,2071	0/0:64,0:64:99:0,186,3261	0/0:20,0:20:57.17:0,57,1018	0/0:43,0:42:99:0,123,2189	0/0:61,0:61:99:0,144,2636	0/0:39,0:39:93.30:0,93,1740	1/1:0,38:38:93.32:1420,93,0	0/0:48,0:48:99:0,144,2633	0/0:23,0:23:57.12:0,57,970	0/0:32,0:32:87.22:0,87,1601	1/1:1,22:23:69.11:931,69,0	1/1:0,29:29:60.28:917,60,0	1/1:6,94:100:99:2651,169,0	0/0:23,0:23:57.67:0,58,1089	0/0:26,0:26:47.34:0,47,859	0/0:42,0:42:86.96:0,87,1643	0/0:33,0:33:84.24:0,84,1505	0/0:40,0:40:99:0,120,2163	1/1:0,41:41:93.32:1418,93,0	0/0:12,0:12:36.12:0,36,681
chr10	103015138	.	CGTGCGTGTGTGTGTGTGT	C	6285.77	PASS	AB=0.777;AC=26;AF=0.464;AN=56;BaseQRankSum=5.532;DP=835;FS=17.394;HRun=0;HaplotypeScore=319.4009;InbreedingCoeff=0.1993;MQ=55.13;MQ0=12;MQRankSum=-2.886;QD=12.25;ReadPosRankSum=-0.398;VQSLOD=1.8408;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:37:0.56:388,1,0	1/1:6,1:7:4.16:240,4,0	0/0:36,0:19:43.64:0,44,424	0/0:58,0:36:78.67:0,79,866	0/0:10,0:10:29.93:0,30,967	1/1:2,22:25:17.73:572,18,0	0/1:7,34:42:10.28:219,0,10	0/1:13,0:31:99:439,0,349	1/1:1,29:30:17.92:514,18,0	0/0:45,0:44:99:0,122,3599	0/0:18,0:18:50.98:0,51,2270	0/0:42,0:41:98.55:0,99,4649	1/1:4,31:36:23.91:905,24,0	0/1:3,30:34:99:648,0,230	0/1:19,0:23:87.49:87,0,180	0/0:30,0:30:71.23:0,71,2769	0/1:5,22:27:37.62:179,0,38	0/1:16,0:16:96.04:237,0,96	0/1:15,0:15:8.91:159,0,9	0/1:18,0:23:92.70:93,0,96	0/1:57,0:56:5.51:351,0,6	1/1:1,23:24:2.68:76,3,0	1/1:0,32:33:12.52:327,13,0	0/0:6,29:36:2.49:0,2,85	1/1:22,6:30:45.63:569,46,0	0/0:26,0:25:68.85:0,69,2034	0/1:18,0:20:56.13:283,0,56	0/0:21,0:21:58.86:0,59,2527
chr10	103015142	.	CGT	C	227.78	PASS	AB=0.959;AC=18;AF=0.375;AN=48;BaseQRankSum=5.114;DP=810;FS=0.000;HRun=0;HaplotypeScore=184.4891;InbreedingCoeff=0.0538;MQ=54.47;MQ0=12;MQRankSum=-3.468;QD=0.62;ReadPosRankSum=3.652;VQSLOD=2.5702;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:36:0:0,0,0	0/1:7,0:7:8.14:8,0,15	./.	./.	0/0:10,0:10:6.02:0,6,87	1/1:24,0:24:5.68:28,6,0	0/0:38,0:38:0.47:0,0,1	0/0:32,0:31:2.37:0,2,8	0/0:29,0:29:0.93:0,1,3	0/0:43,1:47:41.02:0,41,411	0/1:18,4:22:79.43:79,0,84	0/0:42,0:43:25.91:0,26,412	1/1:33,0:33:11.48:53,11,0	0/1:32,0:32:29.99:30,0,33	0/0:22,0:22:0.44:0,0,0	0/1:26,2:28:34.73:35,0,298	1/1:27,0:27:3.31:15,3,0	0/0:16,0:16:2.38:0,2,34	./.	0/0:22,0:23:8.47:0,8,53	./.	0/1:24,0:24:0.16:0,0,0	1/1:33,0:33:0.36:1,0,0	0/1:32,0:32:0.08:0,0,0	0/0:31,0:32:2.43:0,2,13	0/1:25,2:26:43.83:44,0,128	0/1:22,0:21:13.95:17,0,14	0/1:18,2:21:41.18:41,0,282
chr10	103016610	.	A	ACC	3048.80	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.157;DP=522;FS=3.797;HRun=6;HaplotypeScore=115.6717;InbreedingCoeff=0.9841;MQ=90.92;MQ0=0;MQRankSum=-6.512;QD=30.19;ReadPosRankSum=-1.056;VQSLOD=2.8832;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:60.17:0,60,730	0/0:7,0:7:18.02:0,18,202	0/0:34,0:32:86.44:0,86,1004	0/0:30,0:28:51.38:0,51,653	0/0:18,0:18:45.12:0,45,535	0/0:14,0:14:42.13:0,42,511	0/0:28,0:28:63.17:0,63,755	1/1:7,15:22:39.06:623,39,0	0/0:22,0:22:57.10:0,57,660	0/0:25,0:25:69.21:0,69,833	0/0:11,0:11:24.07:0,24,292	0/0:13,0:13:30.09:0,30,366	0/0:14,0:14:33.10:0,33,401	0/0:17,0:17:30.06:0,30,353	1/1:2,0:5:9.01:87,9,0	0/0:18,0:18:42.10:0,42,500	0/0:35,0:35:78.22:0,78,947	0/0:18,0:18:36.05:0,36,409	1/1:13,9:22:42.12:645,42,0	1/1:4,7:11:27.09:443,27,0	1/1:2,13:15:30.10:507,30,0	0/0:11,0:11:33.09:0,33,390	0/0:19,0:19:44.67:0,45,542	0/0:22,0:22:45.12:0,45,536	0/0:9,0:9:24.07:0,24,292	0/0:17,0:17:39.11:0,39,464	1/1:8,16:23:57.18:929,57,0	0/0:8,0:8:21.06:0,21,256
chr10	103016628	.	CGCA	C	269.04	PASS	AB=0.856;AC=5;AF=0.089;AN=56;BaseQRankSum=5.621;DP=504;FS=13.430;HRun=0;HaplotypeScore=138.8272;InbreedingCoeff=0.1139;MQ=70.33;MQ0=4;MQRankSum=-4.755;QD=4.20;ReadPosRankSum=-2.446;VQSLOD=1.5723;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:58.82:0,59,1043	0/0:7,0:7:18.05:0,18,302	0/0:46,0:28:83.09:0,83,1948	0/0:30,0:19:57.06:0,57,1262	0/0:18,0:18:54.19:0,54,1310	0/0:22,0:22:58.49:0,58,960	0/0:27,0:27:65.27:0,65,1135	0/0:15,0:15:34.90:0,35,209	0/0:19,0:19:54.03:0,54,807	0/0:26,0:26:78.27:0,78,1910	0/0:10,0:10:27.06:0,27,525	0/0:11,0:11:33.11:0,33,771	0/0:13,0:13:32.97:0,33,491	0/0:14,0:14:19.17:0,19,341	0/1:5,0:5:2.43:11,0,2	0/0:12,0:12:29.94:0,30,737	0/0:32,0:32:74.74:0,75,1166	0/0:17,0:17:39.13:0,39,886	0/1:10,1:11:44.65:45,0,54	0/1:6,4:10:5.94:92,0,6	0/1:15,1:16:13.71:14,0,30	0/0:10,0:10:26.88:0,27,358	0/0:23,0:23:59.91:0,60,953	0/0:17,0:17:24.06:0,24,421	0/0:12,0:12:32.96:0,33,579	0/0:22,0:22:63.22:0,63,1495	0/1:13,9:21:21.09:222,0,21	0/0:6,0:6:15.05:0,15,349
chr10	103016633	.	CACAG	C	1194.06	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=13.003;DP=558;FS=3.993;HRun=0;HaplotypeScore=151.5210;InbreedingCoeff=0.2860;MQ=63.61;MQ0=5;MQRankSum=-8.820;QD=4.51;ReadPosRankSum=-0.923;VQSLOD=2.3282;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:36:35.90:0,36,286	0/1:5,0:5:8.22:8,0,38	0/0:43,0:25:65.96:0,66,655	0/0:27,0:16:24.42:0,24,311	0/0:22,0:22:60.09:0,60,1129	0/1:23,0:23:10.78:11,0,167	0/0:29,0:29:19.10:0,19,283	1/1:17,0:17:20.48:214,20,0	0/1:25,0:25:43.14:43,0,126	0/0:30,0:30:90.15:0,90,1486	0/0:8,0:8:18.04:0,18,428	0/0:12,0:12:29.43:0,29,553	0/1:15,0:15:33.30:33,0,46	0/1:14,0:14:31.95:48,0,32	1/1:8,1:8:6:62,6,0	0/0:14,0:14:36.05:0,36,610	0/1:35,0:35:36.97:37,0,158	0/0:20,0:20:26.36:0,26,248	1/1:17,1:18:6.21:231,6,0	1/1:11,1:12:14.78:133,15,0	1/1:16,1:16:17.93:140,18,0	0/1:12,0:12:9.24:9,0,60	0/1:25,0:24:24.11:24,0,151	0/0:20,0:20:11.96:0,12,97	0/1:14,0:14:38.13:38,0,93	0/0:26,0:26:69.10:0,69,1201	1/1:24,0:23:24.16:352,24,0	0/0:6,0:6:17.36:0,17,240
chr10	103016634	.	ACAG	A	269.90	PASS	AB=0.909;AC=7;AF=0.125;AN=56;BaseQRankSum=5.188;DP=567;FS=0.786;HRun=0;HaplotypeScore=149.6732;InbreedingCoeff=0.0522;MQ=63.60;MQ0=5;MQRankSum=-6.424;QD=2.55;ReadPosRankSum=-2.572;VQSLOD=2.2945;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:35.28:0,35,740	0/0:5,0:5:12.66:0,13,170	0/0:43,0:25:75.26:0,75,1541	0/0:28,0:16:48.16:0,48,895	0/0:24,0:24:65.76:0,66,1366	0/0:23,0:23:37.88:0,38,608	0/0:29,0:29:39.23:0,39,717	0/1:16,1:17:15.74:16,0,167	0/0:25,0:25:34.44:0,34,452	0/0:31,0:31:93.32:0,93,2019	0/0:8,0:8:18.06:0,18,431	0/0:12,0:12:30.10:0,30,662	0/0:14,0:14:17.15:0,17,205	0/1:14,0:14:3.16:3,0,124	0/1:10,0:9:0.09:8,0,0	0/0:15,0:15:38.72:0,39,787	0/0:36,0:36:42.67:0,43,617	0/0:20,0:20:43.97:0,44,705	0/1:16,1:17:15.22:112,0,15	0/1:8,3:12:8.05:63,0,8	0/0:17,0:16:13.01:0,13,44	0/1:12,0:12:5.41:5,0,180	0/0:25,0:25:33.59:0,34,541	0/0:21,0:21:12.04:0,12,248	0/0:14,0:14:26.83:0,27,361	0/0:26,0:26:75.20:0,75,1496	0/1:15,7:23:24.53:182,0,25	0/0:7,0:7:21.01:0,21,321
chr10	103016637	.	GACACAC	G	3003.41	PASS	AB=0.846;AC=28;AF=0.538;AN=52;BaseQRankSum=8.219;DP=580;FS=0.000;HRun=0;HaplotypeScore=164.0156;InbreedingCoeff=0.5143;MQ=59.82;MQ0=8;MQRankSum=-7.773;QD=9.16;ReadPosRankSum=-0.268;VQSLOD=2.4005;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,21:38:0.42:38,0,0	1/1:2,2:5:6.02:123,6,0	./.	0/0:31,0:16:5.98:0,6,66	0/0:23,0:24:49.41:0,49,1345	1/1:11,11:23:17.99:326,18,0	0/1:16,13:30:62:128,0,62	1/1:16,0:16:1.31:3,1,0	1/1:8,15:25:26.88:466,27,0	0/0:33,0:33:66.15:0,66,1623	0/0:8,0:9:15.05:0,15,489	0/0:11,0:12:24.07:0,24,629	1/1:5,9:16:17.97:287,18,0	1/1:7,7:14:12.04:225,12,0	0/0:11,0:10:8.88:0,9,63	0/0:16,0:17:18.12:0,18,765	1/1:19,0:37:26.96:350,27,0	0/1:11,7:19:32.55:93,0,33	0/1:18,0:18:28.21:77,0,28	0/1:13,0:13:13.09:114,0,13	./.	1/1:3,8:12:9.03:161,9,0	1/1:11,14:25:21.46:368,21,0	0/0:12,10:22:3.01:0,3,38	1/1:7,6:14:10.69:142,11,0	0/0:25,0:28:63.19:0,63,1463	1/1:22,0:21:2.64:288,3,0	0/0:5,0:7:18.06:0,18,375
chr10	103016699	.	CACA	C	4415.26	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.194;DP=590;FS=4.043;HRun=0;HaplotypeScore=126.4399;InbreedingCoeff=0.9977;MQ=70.14;MQ0=2;MQRankSum=-3.634;QD=37.10;ReadPosRankSum=1.156;VQSLOD=5.5204;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:51.09:0,51,1051	0/0:7,0:7:21.07:0,21,484	0/0:17,0:14:36.12:0,36,684	0/0:30,0:23:55.86:0,56,976	0/0:17,0:17:51.16:0,51,1131	0/0:20,0:20:48.16:0,48,1105	0/0:21,0:21:42.08:0,42,874	1/1:1,25:26:75.26:1276,75,0	0/0:26,0:26:57:0,57,1116	0/0:27,0:27:75.25:0,75,1685	0/0:17,0:17:51.18:0,51,1173	0/0:14,0:14:42.10:0,42,876	0/0:28,0:28:66.22:0,66,1505	0/0:23,0:23:69.24:0,69,1524	1/1:0,14:14:27.09:460,27,0	0/0:20,0:20:60.21:0,60,1383	0/0:27,0:26:60.16:0,60,1284	0/0:22,0:22:63.17:0,63,1378	1/1:1,14:15:42.14:713,42,0	1/1:1,17:18:33.11:562,33,0	1/1:3,14:17:27.09:460,27,0	0/0:24,0:24:63.06:0,63,1299	0/0:25,0:24:57.07:0,57,1146	0/0:22,0:22:29.94:0,30,642	0/0:23,0:23:60.16:0,60,1308	0/0:28,0:28:75.22:0,75,1515	1/1:2,27:29:57.08:944,57,0	0/0:7,0:7:21.07:0,21,484
chr10	103017995	.	G	GAGAT	22003.94	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-14.886;DP=630;FS=6.415;HRun=0;HaplotypeScore=80.4184;InbreedingCoeff=0.9948;MQ=77.52;MQ0=0;MQRankSum=-3.076;QD=48.04;ReadPosRankSum=3.927;VQSLOD=5.1491;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:48.16:1219,48,0	1/1:3,7:10:18.06:457,18,0	0/0:24,0:22:32.64:0,33,393	0/0:25,0:25:52.75:0,53,745	0/0:27,0:27:75.17:0,75,1214	1/1:2,30:33:75.26:1858,75,0	1/1:6,16:22:24.08:588,24,0	1/1:8,20:30:75.09:1121,75,0	1/1:2,19:21:36.12:914,36,0	0/0:15,0:15:39.10:0,39,599	0/0:21,0:21:54.12:0,54,794	0/0:23,0:23:63.17:0,63,1012	1/1:3,19:24:33.11:834,33,0	1/1:6,18:25:54.19:1348,54,0	1/1:5,32:37:81.28:2057,81,0	0/0:18,0:18:42.11:0,42,670	1/1:3,24:29:60.21:1523,60,0	1/1:6,15:21:36.12:914,36,0	1/1:3,12:15:39.12:783,39,0	1/1:3,16:19:42.14:1024,42,0	1/1:2,42:44:96.33:2437,96,0	1/1:2,11:13:24.08:609,24,0	1/1:1,9:12:24.08:589,24,0	1/1:3,23:26:54.19:1371,54,0	1/1:2,10:12:24.08:609,24,0	0/0:14,0:14:39.12:0,39,629	1/1:3,30:36:69.24:1751,69,0	0/0:5,0:5:15.05:0,15,261
chr10	103018459	.	GGTGT	G	3573.05	PASS	AB=0.881;AC=33;AF=0.635;AN=52;BaseQRankSum=5.886;DP=707;FS=5.367;HRun=0;HaplotypeScore=143.7324;InbreedingCoeff=0.6198;MQ=54.23;MQ0=17;MQRankSum=-2.605;QD=8.71;ReadPosRankSum=-1.092;VQSLOD=2.5458;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,8:37:23.98:302,24,0	0/1:6,1:8:33.15:66,0,33	./.	./.	0/0:21,0:30:41.85:0,42,614	0/1:23,3:26:84.45:84,0,324	1/1:18,5:24:18.05:253,18,0	0/0:26,0:25:2.98:0,3,50	1/1:15,6:20:20.27:268,20,0	0/0:23,0:23:21.06:0,21,417	0/0:18,0:18:23.99:0,24,454	0/0:27,0:30:31.82:0,32,561	1/1:21,5:29:24.06:336,24,0	1/1:12,0:14:9.02:121,9,0	1/1:14,0:27:18.01:164,18,0	0/1:17,1:18:31.76:32,0,222	0/0:34,1:36:3.97:0,4,840	1/1:14,4:18:26.36:382,26,0	1/1:14,0:17:4.03:83,4,0	1/1:9,0:14:5.90:42,6,0	1/1:42,0:42:5.64:39,6,0	1/1:16,5:23:18.05:243,18,0	1/1:9,8:17:27.08:383,27,0	1/1:25,11:38:32.99:476,33,0	1/1:9,2:14:11.99:149,12,0	0/0:20,0:21:20.57:0,21,400	1/1:6,0:14:15.88:149,16,0	0/0:12,0:13:20.76:0,21,297
chr10	103020089	.	C	CTA	6887.90	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=1.192;DP=582;FS=3.081;HRun=0;HaplotypeScore=83.6528;InbreedingCoeff=0.9606;MQ=72.65;MQ0=15;MQRankSum=-1.350;QD=16.40;ReadPosRankSum=4.647;VQSLOD=4.8303;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:65.42:507,65,0	1/1:7,0:7:14.66:111,15,0	0/0:36,0:24:62.68:0,63,553	0/0:41,0:25:66.01:0,66,647	0/0:9,0:9:20.96:0,21,170	1/1:17,0:17:40.44:317,40,0	1/1:31,0:31:67.18:584,67,0	1/1:21,0:21:60.02:536,60,0	1/1:21,0:21:52.70:390,53,0	0/0:12,0:12:29.11:0,29,248	0/0:12,0:12:28.63:0,29,232	0/0:21,0:19:44.94:0,45,386	1/1:16,0:16:40.30:302,40,0	1/1:23,0:23:53.20:403,53,0	1/1:4,19:24:6.02:77,6,0	0/0:14,0:14:38.55:0,39,318	1/1:26,0:26:14.84:179,15,0	1/1:21,0:21:49.90:330,50,0	1/1:14,0:14:35.81:297,36,0	1/1:15,0:15:41.39:317,41,0	1/1:45,0:45:83.89:753,84,0	1/1:19,0:18:41.93:345,42,0	1/1:13,0:13:26.58:198,27,0	1/1:44,0:43:97.07:765,97,0	1/1:12,0:12:29.56:227,30,0	0/0:12,0:12:35.75:0,36,282	1/1:14,0:14:34.81:248,35,0	0/0:5,0:5:5.97:0,6,45
chr10	103020090	.	TAC	T	1218.39	PASS	AB=0.913;AC=32;AF=0.667;AN=48;BaseQRankSum=0.615;DP=599;FS=1.070;HRun=0;HaplotypeScore=97.3098;InbreedingCoeff=0.3225;MQ=70.26;MQ0=15;MQRankSum=0.880;QD=3.23;ReadPosRankSum=0.906;VQSLOD=2.1027;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,5:38:3.95:34,4,0	1/1:5,2:7:3:32,3,0	./.	./.	0/1:9,1:10:25.79:26,0,35	1/1:16,1:18:5.83:40,6,0	1/1:31,0:31:12.03:124,12,0	0/0:22,0:22:1.25:0,1,3	1/1:19,2:21:8.76:95,9,0	0/0:13,0:13:3:0,3,26	0/1:13,0:13:25.71:26,0,38	0/0:21,0:19:5.58:0,6,85	1/1:15,1:16:5.70:63,6,0	1/1:23,1:24:9.01:88,9,0	0/0:23,0:24:6:0,6,52	1/1:14,0:14:3:32,3,0	0/0:9,0:32:15.45:0,15,171	1/1:19,1:21:11.14:108,11,0	./.	1/1:14,0:15:6.01:64,6,0	0/1:44,1:45:2.10:117,0,2	1/1:19,0:18:2.99:25,3,0	0/1:9,4:13:21.82:42,0,22	1/1:37,7:43:27.54:286,28,0	1/1:12,1:13:8.88:73,9,0	0/0:13,0:13:8.97:0,9,88	1/1:13,2:15:9.02:95,9,0	./.
chr10	103020921	.	TA	T	2139.73	PASS	AB=0.950;AC=15;AF=0.268;AN=56;BaseQRankSum=4.720;DP=584;FS=2.269;HRun=11;HaplotypeScore=79.8415;InbreedingCoeff=0.7385;MQ=77.83;MQ0=0;MQRankSum=0.203;QD=12.16;ReadPosRankSum=-0.812;VQSLOD=3.4699;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,3:50:82.85:0,83,1263	0/0:5,0:5:3.01:0,3,32	0/1:20,0:20:2.05:2,0,258	0/1:13,0:13:5.64:6,0,69	0/0:20,0:20:45.11:0,45,478	0/0:26,3:29:7.33:0,7,683	0/0:24,0:24:63.11:0,63,651	1/1:3,17:21:46.97:375,47,0	0/0:17,0:17:45.08:0,45,463	0/0:20,1:22:22.81:0,23,413	0/0:9,0:9:21:0,21,211	0/0:20,1:22:35.51:0,36,572	0/0:14,2:17:20.26:0,20,393	0/0:16,0:16:48.06:0,48,486	1/1:3,17:20:18.96:362,19,0	0/1:13,3:17:10.37:10,0,288	0/0:25,0:25:69.07:0,69,719	0/0:20,0:20:51.13:0,51,544	1/1:5,14:20:40.96:326,41,0	1/1:5,23:28:39.93:535,40,0	1/1:1,12:13:29.96:246,30,0	0/0:16,1:18:23.29:0,23,423	0/0:24,0:24:51.13:0,51,543	0/0:22,0:24:50.96:0,51,526	0/0:23,1:24:29.47:0,29,508	0/0:29,1:30:47.53:0,48,706	1/1:3,21:24:56.90:465,57,0	0/0:12,0:12:30.08:0,30,320
chr10	103022340	.	GCA	G	2558.15	PASS	AB=0.975;AC=30;AF=0.536;AN=56;BaseQRankSum=5.884;DP=542;FS=2.225;HRun=0;HaplotypeScore=105.7246;InbreedingCoeff=0.2230;MQ=60.31;MQ0=19;MQRankSum=-0.599;QD=6.08;ReadPosRankSum=0.569;VQSLOD=3.3619;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:20:7.99:50,8,0	0/1:6,0:6:29.10:29,0,46	0/0:11,0:5:3:0,3,28	0/0:10,0:3:3:0,3,25	0/0:16,0:17:42.14:0,42,658	1/1:16,0:15:8.91:65,9,0	1/1:30,0:30:15.02:96,15,0	1/1:13,21:29:56.80:573,57,0	0/1:13,0:13:10.65:15,0,11	0/0:22,1:23:23.98:0,24,817	0/1:11,1:12:6.45:6,0,357	0/1:14,2:16:11.10:11,0,514	0/1:13,0:13:7.18:50,0,7	0/1:17,0:19:28.46:28,0,51	0/0:18,0:17:21.95:0,22,150	0/0:14,0:14:9.24:0,9,407	1/1:5,0:44:56.82:279,57,0	1/1:21,0:19:7.39:83,7,0	1/1:12,14:24:37.95:395,38,0	1/1:4,13:17:23.17:263,23,0	1/1:7,15:18:26.91:303,27,0	0/1:21,0:18:34:41,0,34	0/1:16,0:14:9.72:10,0,40	0/1:19,0:18:49.97:50,0,50	0/0:20,0:20:3.89:0,4,15	0/1:30,2:32:8.63:9,0,938	1/1:2,16:20:35.77:387,36,0	0/0:8,0:8:15.05:0,15,241
chr10	103022357	.	CACAG	C	1583.15	PASS	AB=0.982;AC=24;AF=0.444;AN=54;BaseQRankSum=3.864;DP=585;FS=0.973;HRun=0;HaplotypeScore=130.6095;InbreedingCoeff=0.2832;MQ=52.54;MQ0=24;MQRankSum=1.047;QD=4.37;ReadPosRankSum=0.391;VQSLOD=2.5056;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:21:7.67:100,8,0	1/1:5,1:6:5.10:31,5,0	./.	0/0:9,0:1:3.01:0,3,38	0/0:21,0:21:56.84:0,57,979	1/1:19,0:18:7.38:51,7,0	1/1:30,3:32:12.06:224,12,0	0/1:40,0:33:42.23:42,0,361	1/1:10,0:10:1.90:32,2,0	0/0:30,0:29:84.02:0,84,1348	0/0:16,0:16:45.01:0,45,743	0/0:22,0:22:27.62:0,28,957	1/1:12,0:12:7.41:89,7,0	0/1:18,1:19:30.01:66,0,30	0/0:18,0:16:23.96:0,24,216	0/0:12,0:12:30.07:0,30,613	0/1:51,0:51:99:485,0,100	1/1:26,2:26:9.09:127,9,0	0/1:24,0:21:67.40:67,0,202	0/1:21,0:21:14.99:15,0,271	0/0:29,0:23:14.96:0,15,316	0/1:18,2:17:22.33:94,0,22	0/1:20,0:18:4.54:94,0,5	0/0:20,0:19:8.63:0,9,48	1/1:13,0:13:15.59:142,16,0	0/0:32,0:32:66.56:0,67,1569	0/1:21,0:21:99:107,0,222	0/0:9,0:9:13.56:0,14,450
chr10	103022359	.	CAG	C	2353.18	PASS	AB=0.924;AC=27;AF=0.500;AN=54;BaseQRankSum=6.569;DP=586;FS=2.348;HRun=0;HaplotypeScore=112.3708;InbreedingCoeff=0.2391;MQ=52.18;MQ0=24;MQRankSum=1.959;QD=6.24;ReadPosRankSum=2.176;VQSLOD=3.1242;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,8:20:14.81:163,15,0	0/1:4,1:5:5.56:100,0,6	./.	0/0:10,0:1:3.01:0,3,38	0/0:22,0:22:56.84:0,57,829	1/1:13,6:18:18.01:209,18,0	1/1:26,7:32:34.68:411,35,0	0/1:41,0:34:99:102,0,220	1/1:5,5:10:3.50:60,4,0	0/0:29,0:28:71.61:0,72,1057	0/0:16,0:16:18.97:0,19,543	0/0:23,0:23:28.76:0,29,775	1/1:10,2:12:20:194,20,0	0/1:15,4:19:10:166,0,10	1/1:16,0:14:12.59:147,13,0	0/0:10,0:10:28.62:0,29,448	0/0:52,0:52:39.88:0,40,291	1/1:4,24:26:21.61:217,22,0	0/1:25,0:22:74.56:75,0,106	0/1:21,0:21:84.89:85,0,100	0/1:30,0:24:55.75:56,0,92	0/1:16,4:17:6.32:119,0,6	1/1:15,5:18:1.06:112,1,0	0/1:15,4:18:23.42:119,0,23	1/1:9,5:14:5.60:100,6,0	0/0:32,0:32:63.39:0,63,1155	0/1:21,0:21:54.58:101,0,55	0/0:9,0:9:2.80:0,3,310
chr10	103022361	.	GAC	G	802.51	PASS	AB=0.990;AC=17;AF=0.327;AN=52;BaseQRankSum=5.283;DP=594;FS=5.446;HRun=0;HaplotypeScore=130.2554;InbreedingCoeff=0.2243;MQ=51.01;MQ0=24;MQRankSum=2.391;QD=3.40;ReadPosRankSum=3.579;VQSLOD=2.3793;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:20:7.99:49,8,0	0/1:7,0:7:22.24:29,0,22	./.	./.	0/0:22,0:22:57.17:0,57,868	0/1:20,0:19:0.29:51,0,0	0/1:33,0:32:3.72:76,0,4	0/0:42,0:35:63.13:0,63,685	0/1:9,0:9:10.95:15,0,11	0/0:30,0:29:69.04:0,69,1001	0/0:16,0:16:4.10:0,4,528	0/0:23,0:23:32.70:0,33,837	1/1:12,0:12:10.86:64,11,0	0/1:19,0:19:28.43:28,0,51	1/1:13,3:14:36.10:447,36,0	0/0:11,0:11:27.06:0,27,372	0/0:54,0:54:91.15:0,91,782	1/1:28,0:26:6.97:82,7,0	0/0:25,0:22:10.38:0,10,335	0/0:20,1:21:17.41:0,17,336	0/0:32,0:26:46.29:0,46,419	0/1:19,0:16:8.75:42,0,9	0/0:20,0:18:2.15:0,2,44	0/1:19,0:18:46.48:46,0,48	0/0:15,0:15:4.41:0,4,16	0/0:32,0:32:42.35:0,42,988	0/1:18,2:20:29.92:30,0,230	0/1:10,0:10:7.30:7,0,341
chr10	103022381	.	T	TACACAC	1274.82	PASS	AB=0.708;AC=21;AF=0.389;AN=54;BaseQRankSum=3.163;DP=611;FS=3.225;HRun=0;HaplotypeScore=155.3939;InbreedingCoeff=0.6436;MQ=50.69;MQ0=19;MQRankSum=-0.117;QD=5.36;ReadPosRankSum=-3.609;VQSLOD=1.3865;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,10:23:0.89:2,1,0	1/1:8,0:8:18.01:235,18,0	0/0:13,0:7:15.03:0,15,229	0/0:14,0:2:3.01:0,3,63	0/0:25,0:25:48.16:0,48,995	./.	1/1:22,11:36:11.52:226,12,0	0/0:45,0:38:38.41:0,38,831	1/1:12,0:12:12.03:160,12,0	0/0:23,0:22:51.17:0,51,1017	0/0:20,0:22:39.13:0,39,793	0/0:19,0:22:48.15:0,48,856	1/1:3,8:11:3.01:85,3,0	1/1:6,9:16:5.99:92,6,0	0/1:18,0:18:28.64:29,0,64	0/0:10,0:10:21.06:0,21,403	0/0:55,0:55:99:0,100,2096	1/1:26,0:25:17.95:271,18,0	0/0:17,0:17:2.16:0,2,400	0/0:18,0:19:36.12:0,36,693	0/0:27,0:23:41.98:0,42,816	0/1:10,16:23:0.46:1,0,0	1/1:17,0:15:9.01:219,9,0	0/1:7,12:21:14.59:97,0,15	1/1:13,2:15:4.48:40,4,0	0/0:25,0:25:39.09:0,39,769	0/0:22,0:22:45.11:0,45,856	0/0:10,0:10:27.08:0,27,529
chr10	103023036	.	TAC	T	287.88	PASS	AB=0.928;AC=13;AF=0.241;AN=54;BaseQRankSum=6.155;DP=614;FS=9.608;HRun=0;HaplotypeScore=80.8472;InbreedingCoeff=-0.0879;MQ=63.60;MQ0=9;MQRankSum=-1.325;QD=1.20;ReadPosRankSum=0.575;VQSLOD=0.7944;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,3:25:5.63:0,6,426	0/1:11,1:12:6.45:6,0,238	./.	0/0:21,0:15:0:0,0,0	0/0:33,1:33:15.70:0,16,674	0/1:14,2:17:17.40:17,0,328	0/1:25,1:26:3.28:3,0,357	0/1:20,0:20:14.93:18,0,15	0/0:25,0:24:44.83:0,45,580	0/0:30,0:30:20.24:0,20,507	0/1:27,2:29:92.11:92,0,581	0/0:21,0:21:45.14:0,45,646	0/1:10,4:14:6.30:6,0,312	0/0:15,1:16:27.08:0,27,384	1/1:5,1:24:33.31:177,33,0	0/0:18,0:18:36.10:0,36,523	0/0:15,0:16:17.88:0,18,173	0/0:20,1:21:2.46:0,2,431	0/0:19,0:19:13.95:0,14,183	0/0:26,0:26:24.01:0,24,291	0/0:27,0:26:32.93:0,33,403	0/1:22,1:24:12.42:12,0,373	0/1:16,1:17:28.23:28,0,235	0/1:13,1:14:18.35:18,0,166	0/0:22,1:23:11.77:0,12,596	0/1:25,1:26:15.66:16,0,556	0/1:17,0:17:39.33:39,0,247	0/0:31,2:34:15.21:0,15,1122
chr10	103023117	.	G	GGT	1754.85	PASS	AB=0.920;AC=20;AF=0.357;AN=56;BaseQRankSum=-1.269;DP=631;FS=7.882;HRun=0;HaplotypeScore=118.3085;InbreedingCoeff=0.3270;MQ=69.05;MQ0=6;MQRankSum=2.321;QD=6.20;ReadPosRankSum=1.327;VQSLOD=2.3334;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:5.27:134,0,5	1/1:11,0:11:0.94:2,1,0	0/0:27,0:16:12:0,12,136	0/0:38,0:21:6.02:0,6,68	0/0:22,0:24:29.90:0,30,312	1/1:17,0:17:3.91:46,4,0	0/1:35,0:35:7.14:48,0,7	0/0:17,0:17:10.80:0,11,60	1/1:20,0:20:7.41:205,7,0	0/0:33,0:34:44.96:0,45,491	0/0:20,0:23:26.57:0,27,246	0/0:13,0:17:38.42:0,38,350	0/1:15,0:15:6.14:81,0,6	0/1:19,0:19:3.09:3,0,3	0/1:19,10:29:57.01:492,0,57	0/0:16,0:19:29.75:0,30,300	0/1:10,16:25:50.99:594,0,51	0/1:18,0:18:1.67:41,0,2	0/0:11,0:11:5.68:0,6,28	0/0:17,0:17:20.32:0,20,112	0/0:46,0:46:49.43:0,49,282	0/1:21,0:21:1.53:93,0,2	1/1:17,0:17:3.02:92,3,0	1/1:12,0:11:3.56:10,4,0	1/1:20,0:20:0.38:71,0,0	0/0:28,0:29:26.89:0,27,279	0/0:20,0:20:31.87:0,32,175	0/0:25,0:24:21.06:0,21,238
chr10	103023143	.	TGTGTAC	T	2832.44	PASS	AB=0.999;AC=20;AF=0.357;AN=56;BaseQRankSum=-0.352;DP=647;FS=7.904;HRun=0;HaplotypeScore=166.5033;InbreedingCoeff=-0.1199;MQ=61.15;MQ0=8;MQRankSum=-0.112;QD=7.41;ReadPosRankSum=-3.237;VQSLOD=1.4821;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:99:352,0,585	0/1:7,0:7:27.88:28,0,175	0/0:29,0:16:41.15:0,41,789	0/0:29,0:12:28.31:0,28,369	0/0:19,0:19:48.15:0,48,1256	0/1:23,0:23:99:188,0,566	0/1:31,0:31:99:278,0,756	1/1:15,1:16:3.62:501,4,0	0/1:18,0:18:53:53,0,347	0/0:33,0:33:90.29:0,90,2268	0/0:20,0:19:54.17:0,54,1365	0/0:20,0:20:59.64:0,60,1326	0/1:14,0:14:77.78:78,0,339	0/1:18,0:18:40.76:41,0,557	0/0:25,0:25:75.26:0,75,2028	0/0:26,0:26:68.96:0,69,1677	0/0:24,0:23:63.22:0,63,1700	0/1:19,0:18:99:113,0,511	1/1:2,9:10:30.10:474,30,0	0/1:24,0:24:23.44:48,0,23	0/1:62,1:63:42.03:106,0,42	0/1:26,0:26:99:259,0,648	0/1:20,0:20:99:132,0,471	0/1:14,0:13:62.03:62,0,301	0/1:21,0:21:99:127,0,646	0/0:26,0:26:66.22:0,66,1592	1/1:27,1:28:28.55:168,29,0	0/0:14,0:13:30.10:0,30,889
chr10	103023145	.	TGTAC	T	5461.58	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=-3.204;DP=641;FS=8.114;HRun=0;HaplotypeScore=137.0684;InbreedingCoeff=0.0991;MQ=63.67;MQ0=8;MQRankSum=1.722;QD=14.33;ReadPosRankSum=-3.209;VQSLOD=3.2082;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:99:423,0,151	0/1:7,0:7:36.16:36,0,54	0/0:30,0:17:40.32:0,40,605	0/0:27,0:12:15.98:0,16,281	0/0:18,0:18:42.14:0,42,901	0/1:23,0:23:99:272,0,175	0/1:34,0:34:99:459,0,265	1/1:1,16:17:48.09:640,48,0	0/1:17,0:17:79.35:136,0,79	0/0:31,0:31:81.23:0,81,1587	0/0:21,0:20:51.15:0,51,1005	0/0:21,0:21:31.76:0,32,988	0/1:15,0:15:99:161,0,109	0/1:19,0:19:99:123,0,186	0/0:27,0:27:78.27:0,78,1603	0/0:25,0:25:62.40:0,62,1293	0/0:24,0:23:60.20:0,60,1177	0/1:19,0:18:99:135,0,154	1/1:11,0:10:30.10:426,30,0	1/1:4,19:23:20.95:390,21,0	1/1:3,56:59:48.16:895,48,0	0/1:26,0:26:99:304,0,221	0/1:19,0:19:99:167,0,141	0/1:14,0:13:87.21:113,0,87	0/1:22,0:22:99:184,0,214	0/0:23,0:23:60.20:0,60,1205	1/1:2,25:27:32.91:597,33,0	0/0:13,0:12:27.09:0,27,648
chr10	103023147	.	TAC	T	7314.13	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=5.267;DP=629;FS=0.331;HRun=0;HaplotypeScore=109.9875;InbreedingCoeff=0.9900;MQ=66.38;MQ0=7;MQRankSum=1.662;QD=19.45;ReadPosRankSum=-0.589;VQSLOD=4.9728;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,3:30:62.71:840,63,0	1/1:5,0:5:10.38:103,10,0	0/0:32,0:19:46.76:0,47,718	0/0:27,0:14:22.29:0,22,408	0/0:17,0:17:44.94:0,45,790	1/1:22,1:23:46.39:513,46,0	1/1:31,2:33:64.88:720,65,0	1/1:17,0:17:47.90:592,48,0	1/1:16,2:18:36.24:546,36,0	0/0:30,0:30:87.19:0,87,1524	0/0:19,0:19:49.76:0,50,776	0/0:20,0:20:48.40:0,48,864	1/1:14,0:14:18.35:364,18,0	1/1:17,2:19:34.98:405,35,0	0/0:27,0:27:77.67:0,78,1109	0/0:23,0:23:66.01:0,66,1125	0/0:23,0:22:38.06:0,38,686	1/1:15,5:20:41.42:437,41,0	1/1:11,0:10:30.06:398,30,0	1/1:20,0:20:20.59:152,21,0	1/1:59,0:59:26.25:326,26,0	1/1:26,2:28:53.02:706,53,0	1/1:18,0:18:32.08:408,32,0	1/1:11,2:12:19.03:203,19,0	1/1:21,1:22:31.40:358,31,0	0/0:24,0:24:69.11:0,69,1112	1/1:26,0:26:32.73:242,33,0	0/0:11,0:10:27.09:0,27,515
chr10	103023670	.	T	TCACACACA	2522.94	PASS	AB=1.000;AC=33;AF=0.611;AN=54;BaseQRankSum=4.184;DP=460;FS=21.605;HRun=0;HaplotypeScore=127.2130;InbreedingCoeff=0.7351;MQ=50.85;MQ0=10;MQRankSum=-3.668;QD=10.21;ReadPosRankSum=-2.295;VQSLOD=0.6782;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:11.05:126,11,0	1/1:6,0:5:3.01:31,3,0	0/0:36,0:17:9.02:0,9,222	0/0:28,0:12:11.36:0,11,164	0/0:17,0:17:30.09:0,30,704	1/1:12,0:10:1.25:3,1,0	1/1:13,0:12:3.01:74,3,0	1/1:20,0:18:12.04:243,12,0	1/1:10,1:10:15.05:349,15,0	0/0:22,0:22:39.09:0,39,729	0/0:17,0:17:18.06:0,18,431	0/0:19,0:20:21.07:0,21,494	1/1:10,0:10:5.99:48,6,0	1/1:9,0:9:1.55:4,2,0	0/0:16,0:16:17.94:0,18,393	0/0:19,0:18:27.08:0,27,624	1/1:9,0:8:3.01:87,3,0	1/1:7,0:7:9.03:204,9,0	1/1:19,1:17:30.07:711,30,0	1/1:17,0:17:9.03:246,9,0	0/1:21,0:20:0:0,0,0	./.	1/1:12,0:12:7.25:37,7,0	1/1:17,0:17:5.01:31,5,0	1/1:15,0:14:2.96:92,3,0	0/0:14,0:14:27.17:0,27,586	1/1:21,2:21:23.09:427,23,0	0/0:12,0:12:30.10:0,30,734
chr10	103023699	.	C	CAGAGAGAGAGAG	2073.96	PASS	AB=0.906;AC=28;AF=0.560;AN=50;BaseQRankSum=0.113;DP=431;FS=0.955;HRun=0;HaplotypeScore=139.7357;InbreedingCoeff=0.6533;MQ=40.66;MQ0=18;MQRankSum=-5.574;QD=10.37;ReadPosRankSum=-1.864;VQSLOD=2.0721;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,2:15:0.47:1,0,0	1/1:2,0:2:3.01:130,3,0	./.	0/0:33,0:9:6.02:0,6,176	0/0:21,0:20:24.05:0,24,732	./.	1/1:13,0:12:5.99:79,6,0	1/1:23,0:19:16.80:314,17,0	1/1:10,3:12:9.03:368,9,0	0/0:26,0:25:37.84:0,38,992	0/0:16,0:16:21.04:0,21,506	0/0:12,0:14:18.06:0,18,591	1/1:5,0:5:3.01:105,3,0	1/1:9,0:9:6.02:144,6,0	0/1:18,0:18:0:0,0,0	0/0:20,0:18:20.85:0,21,693	1/1:5,0:3:2.50:9,2,0	1/1:10,0:10:7.27:258,7,0	1/1:15,0:14:15.03:501,15,0	1/1:18,0:17:6.02:88,6,0	1/1:16,0:14:5.97:44,6,0	./.	0/0:10,2:14:1.16:0,1,2	0/0:11,2:13:0.47:0,0,1	0/1:10,0:12:0:0,0,0	0/0:17,0:17:15.05:0,15,504	1/1:16,1:18:6.02:193,6,0	0/0:12,0:13:12.02:0,12,313
chr10	103023725	.	G	GAGAGAGAG	1700.39	PASS	AB=1.000;AC=33;AF=0.660;AN=50;BaseQRankSum=3.309;DP=457;FS=1.911;HRun=0;HaplotypeScore=104.3951;InbreedingCoeff=0.6657;MQ=64.80;MQ0=16;MQRankSum=-6.017;QD=7.14;ReadPosRankSum=-3.739;VQSLOD=1.2515;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:11:4.07:12,4,0	1/1:3,0:3:3.01:105,3,0	1/1:47,0:20:0.92:2,1,0	0/0:49,0:19:6.82:0,7,130	0/0:26,0:25:24.05:0,24,537	1/1:15,0:14:2.04:6,2,0	1/1:9,0:8:5.98:124,6,0	1/1:21,0:19:15.91:270,16,0	1/1:12,0:10:9.01:242,9,0	0/0:25,0:24:38.02:0,38,784	0/0:13,0:13:21.04:0,21,418	0/0:13,0:13:18.06:0,18,423	0/1:4,0:4:0:0,0,0	1/1:6,0:6:5.84:114,6,0	1/1:17,0:17:2.90:30,3,0	0/0:22,0:19:21.07:0,21,505	./.	1/1:6,0:6:9.02:218,9,0	1/1:20,0:18:13.86:360,14,0	1/1:16,0:16:6.02:88,6,0	1/1:14,0:12:5.97:45,6,0	./.	1/1:8,0:8:2.04:6,2,0	1/1:7,0:7:2.04:6,2,0	./.	0/0:17,0:17:15.05:0,15,365	1/1:20,0:18:14.06:240,14,0	0/0:18,0:18:9.56:0,10,225
chr10	103023840	.	CAA	C	1990.73	PASS	AB=0.701;AC=23;AF=0.411;AN=56;BaseQRankSum=-1.256;DP=514;FS=17.795;HRun=15;HaplotypeScore=77.0213;InbreedingCoeff=0.7959;MQ=59.47;MQ0=25;MQRankSum=1.827;QD=10.05;ReadPosRankSum=7.047;VQSLOD=0.4520;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:9,18:28:4.87:343,0,5	1/1:5,2:7:5.90:51,6,0	0/1:24,0:11:0.98:1,0,98	0/0:25,1:14:21.03:0,21,157	0/0:24,0:25:44.50:0,45,503	1/1:3,11:13:23.98:211,24,0	1/1:7,6:13:19.71:149,20,0	0/0:19,0:34:73.58:0,74,617	1/1:5,6:9:20.97:182,21,0	0/0:27,0:26:59.03:0,59,639	0/0:17,0:18:39.92:0,40,453	0/0:10,0:10:23.55:0,24,277	1/1:5,2:7:13.52:108,14,0	1/1:2,5:8:8.77:123,9,0	0/0:13,0:15:27.02:0,27,303	0/0:16,0:16:38.54:0,39,447	0/0:18,1:24:6.80:0,7,119	1/1:7,12:18:29.70:250,30,0	0/0:8,0:11:14.08:0,14,185	0/0:13,0:18:40.76:0,41,324	0/0:9,0:10:14.47:0,14,114	1/1:5,5:13:27.26:207,27,0	0/1:4,7:11:5.19:114,0,5	1/1:8,15:22:35.61:300,36,0	1/1:4,5:10:14.59:161,15,0	0/0:22,0:24:49.83:0,50,579	0/0:18,0:20:32.94:0,33,305	0/0:17,0:15:38.50:0,39,421
chr10	103023854	.	AAG	A	451.01	PASS	AB=0.950;AC=15;AF=0.268;AN=56;BaseQRankSum=5.937;DP=516;FS=41.266;HRun=0;HaplotypeScore=87.5159;InbreedingCoeff=-0.1546;MQ=73.55;MQ0=15;MQRankSum=-0.459;QD=2.08;ReadPosRankSum=4.538;VQSLOD=-0.0843;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:21.72:22,0,100	0/1:3,1:4:18.87:27,0,19	0/1:48,0:25:11.34:11,0,237	0/0:41,0:24:28.51:0,29,278	0/0:21,0:20:32.36:0,32,483	0/1:15,0:13:6.94:38,0,7	0/1:10,1:11:21.77:55,0,22	0/0:33,0:32:13.96:0,14,368	0/1:10,0:8:2.81:88,0,3	0/0:27,0:27:52.10:0,52,685	0/0:16,0:16:21.26:0,21,381	0/0:12,0:11:28.88:0,29,322	0/1:5,2:7:27.56:73,0,28	1/1:8,1:9:3.49:60,3,0	0/0:15,0:15:34.16:0,34,325	0/0:18,0:17:49.83:0,50,508	0/0:22,0:20:6.83:0,7,182	0/1:19,0:18:20.78:21,0,85	0/1:11,0:11:5.59:6,0,199	0/0:20,0:18:25.11:0,25,320	0/0:12,0:11:20.85:0,21,185	0/1:13,1:13:37.92:62,0,38	0/1:10,0:10:14.96:15,0,43	0/1:22,0:20:15.89:59,0,16	0/1:10,1:11:39.77:69,0,40	0/0:22,0:22:59.55:0,60,688	0/0:21,0:18:5.30:0,5,276	0/0:18,0:15:31.40:0,31,412
chr10	103024025	.	G	GC	8506.72	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-12.846;DP=476;FS=3.733;HRun=6;HaplotypeScore=43.6716;InbreedingCoeff=0.9565;MQ=91.55;MQ0=0;MQRankSum=-3.071;QD=31.51;ReadPosRankSum=2.602;VQSLOD=5.2700;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,30:34:81.26:1019,81,0	1/1:1,2:3:6.02:74,6,0	0/0:18,0:18:45.02:0,45,452	0/0:30,0:29:60.23:0,60,577	0/0:18,0:18:51.11:0,51,518	1/1:1,24:24:60.19:755,60,0	1/1:0,15:15:36.12:453,36,0	1/1:2,28:30:81.23:990,81,0	1/1:3,13:16:39.12:490,39,0	0/0:9,0:9:21.05:0,21,214	0/0:11,0:11:30.06:0,30,303	0/0:14,0:14:36.08:0,36,367	1/1:2,9:11:24.08:302,24,0	1/1:1,12:13:36.12:453,36,0	0/0:12,0:12:30.06:0,30,306	0/0:12,0:12:33.08:0,33,337	0/0:31,0:31:84.19:0,84,856	1/1:0,19:19:45.14:563,45,0	1/1:1,24:25:72.23:905,72,0	1/1:2,12:14:33.06:396,33,0	1/1:2,19:21:51.16:634,51,0	1/1:0,4:4:12.04:151,12,0	1/1:0,2:2:6.02:75,6,0	1/1:0,22:22:60.19:755,60,0	1/1:0,4:4:9.03:113,9,0	0/0:32,0:32:87.19:0,87,887	1/1:2,10:12:30.10:377,30,0	0/0:19,0:19:57.12:0,57,579
chr10	103024699	.	G	GCTCTCT	1792.81	PASS	AB=1.000;AC=37;AF=0.740;AN=50;BaseQRankSum=-0.564;DP=615;FS=33.086;HRun=0;HaplotypeScore=155.4503;InbreedingCoeff=0.2981;MQ=67.10;MQ0=15;MQRankSum=-3.016;QD=4.24;ReadPosRankSum=-3.478;VQSLOD=-0.3618;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:39:5.87:116,6,0	1/1:6,0:6:3.01:41,3,0	./.	./.	0/0:25,0:25:3.01:0,3,60	0/1:16,0:16:18.13:18,0,32	0/0:19,0:28:10.13:0,10,93	1/1:27,0:27:15.80:111,16,0	1/1:17,0:17:5.94:77,6,0	1/1:25,0:25:10.06:79,10,0	1/1:21,0:21:11.51:159,12,0	0/0:22,0:23:9.02:0,9,147	1/1:15,0:15:14.65:215,15,0	1/1:15,0:15:6.01:76,6,0	0/0:15,0:19:2.68:0,3,11	0/0:9,0:9:1.83:0,2,167	0/1:21,0:19:16.56:17,0,119	1/1:12,0:11:2.98:22,3,0	1/1:19,0:19:19.84:263,20,0	1/1:20,0:20:2.68:11,3,0	./.	1/1:25,0:25:2.34:68,2,0	1/1:13,0:13:2.28:22,2,0	1/1:25,8:37:4.37:92,4,0	1/1:14,0:14:8.99:90,9,0	0/1:32,0:32:20.21:20,0,136	1/1:28,0:28:26.97:435,27,0	1/1:16,0:14:1.83:4,2,0
chr10	103028187	.	TG	T	7799.14	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-1.913;DP=589;FS=0.766;HRun=9;HaplotypeScore=68.0482;InbreedingCoeff=0.9941;MQ=69.43;MQ0=7;MQRankSum=-0.953;QD=20.10;ReadPosRankSum=3.239;VQSLOD=5.4498;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,29:41:72.84:690,73,0	1/1:5,8:11:24.01:219,24,0	0/0:17,0:13:13.20:0,13,122	0/0:24,0:19:21.33:0,21,246	0/0:25,0:25:55.30:0,55,638	1/1:2,15:17:42.02:384,42,0	1/1:7,11:15:26.84:233,27,0	1/1:3,17:20:51:456,51,0	1/1:2,13:15:33.02:302,33,0	0/0:30,0:30:65.18:0,65,355	0/0:30,0:30:72.99:0,73,480	0/0:19,0:19:20.70:0,21,470	1/1:1,13:14:33.02:302,33,0	1/1:2,11:13:36.02:329,36,0	1/1:3,18:21:51.03:467,51,0	0/0:17,0:17:33.10:0,33,381	1/1:4,12:16:39.02:357,39,0	1/1:4,21:24:59.91:536,60,0	1/1:5,14:18:45:406,45,0	1/1:7,14:22:50.06:445,50,0	1/1:4,18:22:45.02:412,45,0	1/1:4,16:18:48.03:439,48,0	1/1:6,14:19:48.03:438,48,0	1/1:5,19:23:27.36:416,27,0	1/1:6,20:25:60.03:549,60,0	0/0:23,1:24:32.49:0,32,604	1/1:4,17:21:33.74:421,34,0	0/0:15,0:15:39.11:0,39,447
chr10	103029337	.	AC	A	11760.36	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=12.267;DP=733;FS=5.439;HRun=2;HaplotypeScore=73.8785;InbreedingCoeff=0.9718;MQ=78.20;MQ0=0;MQRankSum=-1.986;QD=35.96;ReadPosRankSum=3.966;VQSLOD=5.5010;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:40:99:1480,114,0	1/1:0,14:14:42.14:545,42,0	0/0:17,0:17:51.12:0,51,700	0/0:19,0:19:1.98:0,2,613	0/0:17,0:17:48.15:0,48,694	1/1:0,27:27:75.24:974,75,0	1/1:0,34:34:90.29:1169,90,0	0/0:29,0:29:81.25:0,81,1158	1/1:0,32:32:93.30:1207,93,0	0/0:27,0:27:81.27:0,81,1210	0/0:13,0:13:39.13:0,39,583	0/0:35,0:35:99:0,105,1551	1/1:0,24:24:69.22:895,69,0	1/1:1,26:27:69.22:895,69,0	0/0:34,0:34:99:0,102,1526	0/0:20,0:20:60.20:0,60,888	0/0:45,0:44:99:0,135,1955	1/1:0,24:24:66.21:857,66,0	0/0:22,0:22:66.19:0,66,926	0/0:22,0:22:66.22:0,66,988	0/0:38,0:38:99:0,114,1667	1/1:0,22:22:60.20:779,60,0	1/1:0,19:19:54.18:701,54,0	1/1:1,39:40:99:1402,108,0	1/1:0,24:24:66.21:857,66,0	0/0:27,0:27:78.26:0,78,1145	0/0:27,0:27:81.27:0,81,1212	0/0:14,0:14:42.13:0,42,604
chr10	103029424	.	A	AT	3072.62	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-12.271;DP=669;FS=8.392;HRun=7;HaplotypeScore=67.4830;InbreedingCoeff=0.9916;MQ=74.92;MQ0=0;MQRankSum=-0.273;QD=26.26;ReadPosRankSum=-1.807;VQSLOD=3.4506;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,141,1343	0/0:10,0:10:27.03:0,27,256	0/0:11,0:11:21.55:0,22,257	0/0:17,0:17:32.98:0,33,298	0/0:22,0:22:57.09:0,57,550	0/0:20,0:20:54.09:0,54,521	0/0:27,0:26:69.10:0,69,666	1/1:6,28:35:84.07:943,84,0	0/0:28,0:28:78.13:0,78,753	0/0:30,0:30:75.10:0,75,720	0/0:17,0:17:48.08:0,48,463	0/0:35,0:35:90.10:0,90,856	0/0:25,0:25:69.11:0,69,666	0/0:15,0:15:42.07:0,42,406	0/0:26,0:25:75.10:0,75,719	0/0:19,0:19:54.07:0,54,516	0/0:33,0:33:84.07:0,84,793	0/0:29,0:29:75.05:0,75,708	1/1:4,16:20:48.03:513,48,0	1/1:0,7:7:12.04:145,12,0	1/1:7,27:34:53.05:894,53,0	0/0:23,0:23:69.02:0,69,648	0/0:23,0:23:60.08:0,60,575	0/0:28,0:28:81.10:0,81,770	0/0:17,0:17:39.04:0,39,371	0/0:25,0:24:63.02:0,63,593	1/1:2,19:21:63.19:750,63,0	0/0:21,0:21:56.99:0,57,526
chr10	103031366	.	C	CT	8439.55	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-0.063;DP=586;FS=0.000;HRun=4;HaplotypeScore=75.6221;InbreedingCoeff=0.8980;MQ=71.92;MQ0=1;MQRankSum=1.263;QD=20.69;ReadPosRankSum=1.910;VQSLOD=4.0941;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:61.44:800,61,0	1/1:3,7:10:17.97:211,18,0	0/1:17,0:10:5.38:5,0,89	0/0:18,0:12:2.92:0,3,39	0/0:15,0:15:33.04:0,33,335	1/1:3,14:17:33.11:437,33,0	1/1:6,28:34:73.47:935,73,0	1/1:24,0:24:55.39:400,55,0	1/1:11,5:16:35.54:368,36,0	0/0:28,0:28:68.26:0,68,701	0/0:22,0:22:47.57:0,48,502	0/0:17,0:17:51.08:0,51,527	1/1:3,24:27:51.16:658,51,0	1/1:3,13:16:27.89:394,28,0	1/1:3,17:20:31.65:393,32,0	0/0:11,0:11:24.03:0,24,243	0/0:27,0:27:8.14:0,8,156	1/1:14,8:22:50.08:541,50,0	1/1:26,0:26:67.04:472,67,0	1/1:17,0:17:48.08:308,48,0	1/1:21,0:21:53.11:340,53,0	1/1:6,15:21:43.31:465,43,0	1/1:5,10:17:26.95:305,27,0	1/1:1,21:22:45.15:610,45,0	1/1:9,15:24:40.14:454,40,0	0/0:24,0:24:68.99:0,69,725	1/1:25,0:25:55.38:343,55,0	0/0:16,0:16:38.59:0,39,396
chr10	103031370	.	TA	T	1210.81	PASS	AB=0.891;AC=12;AF=0.214;AN=56;BaseQRankSum=-0.008;DP=582;FS=4.152;HRun=14;HaplotypeScore=95.6139;InbreedingCoeff=0.7137;MQ=69.77;MQ0=1;MQRankSum=-0.116;QD=9.04;ReadPosRankSum=-0.627;VQSLOD=2.9077;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:38:73.58:0,74,464	0/1:7,1:9:2.96:3,0,70	0/0:18,0:11:11.63:0,12,90	0/1:13,1:9:10.93:11,0,25	0/0:14,1:15:10.24:0,10,220	0/0:15,0:16:35.24:0,35,220	0/0:30,0:35:75.97:0,76,456	1/1:8,12:20:26.97:240,27,0	0/0:15,0:15:29.45:0,29,194	0/0:24,1:27:45.04:0,45,522	0/0:17,2:20:11.17:0,11,349	0/0:15,2:17:0.87:0,1,289	0/0:26,0:27:49.83:0,50,304	0/0:15,0:16:34.59:0,35,208	0/0:18,0:20:32.16:0,32,193	0/0:8,1:9:0.43:0,0,142	0/0:7,0:27:51.62:0,52,299	0/0:20,0:23:31.61:0,32,294	1/1:9,15:24:35.42:292,35,0	1/1:7,12:19:27.39:245,27,0	1/1:2,20:22:50.48:344,50,0	0/0:19,0:21:41.56:0,42,264	0/0:15,1:17:10.05:0,10,155	0/0:21,0:21:44.26:0,44,279	0/0:19,0:24:43.40:0,43,248	0/0:23,0:25:62.84:0,63,558	1/1:4,17:25:40.67:249,41,0	0/0:15,0:17:35.78:0,36,305
chr10	103031639	.	T	TA	10313.59	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-14.817;DP=557;FS=4.115;HRun=7;HaplotypeScore=53.4883;InbreedingCoeff=0.9200;MQ=74.98;MQ0=0;MQRankSum=0.624;QD=27.80;ReadPosRankSum=-1.212;VQSLOD=5.1200;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,43:47:99:1341,111,0	1/1:1,7:8:18.06:217,18,0	0/0:12,0:12:17.23:0,17,150	0/1:13,0:13:14.26:14,0,50	0/0:25,0:25:69.11:0,69,666	1/1:0,19:19:57.17:689,57,0	1/1:4,16:20:42.13:507,42,0	1/1:6,32:38:93.26:1099,93,0	1/1:1,13:14:36.11:435,36,0	0/0:32,0:32:93.15:0,93,898	0/0:22,0:22:66.11:0,66,637	0/0:20,0:20:57.08:0,57,546	1/1:2,12:14:33.10:398,33,0	1/1:0,17:17:45.10:527,45,0	1/1:2,19:21:51.16:616,51,0	0/0:15,0:15:42.07:0,42,406	0/0:20,0:20:60.07:0,60,572	1/1:5,16:21:48.15:580,48,0	1/1:4,9:13:29.96:341,30,0	1/1:4,17:21:54.17:652,54,0	1/1:3,15:18:45.14:543,45,0	1/1:1,16:17:42.13:507,42,0	1/1:4,14:18:45.14:541,45,0	1/1:3,13:16:33.10:399,33,0	1/1:4,15:19:45.14:544,45,0	0/0:30,0:30:84.13:0,84,811	1/1:4,13:16:30.09:362,30,0	0/0:9,0:9:24.04:0,24,232
chr10	103032471	.	G	GT	9295.73	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-5.985;DP=529;FS=7.122;HRun=8;HaplotypeScore=59.1033;InbreedingCoeff=0.9608;MQ=81.51;MQ0=0;MQRankSum=-1.180;QD=28.08;ReadPosRankSum=1.279;VQSLOD=5.3257;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:60.18:692,60,0	1/1:2,5:7:15.04:173,15,0	0/0:17,0:17:22.10:0,22,161	0/0:18,0:16:29.45:0,29,218	0/0:31,0:31:72.03:0,72,658	1/1:2,11:13:2.63:284,3,0	1/1:0,19:19:45.13:519,45,0	1/1:7,31:39:80.37:1055,80,0	1/1:2,10:12:27.08:312,27,0	0/0:25,0:24:69.03:0,69,631	0/0:12,0:12:33.02:0,33,302	0/0:19,0:19:54.03:0,54,494	1/1:1,17:18:45.05:519,45,0	1/1:2,12:14:36.11:414,36,0	1/1:1,11:12:33.10:381,33,0	0/0:10,0:10:27:0,27,242	0/0:14,0:14:39.02:0,39,357	1/1:3,24:27:72.21:831,72,0	1/1:6,18:24:29.69:587,30,0	1/1:0,25:25:69.10:754,69,0	1/1:0,3:3:9.03:104,9,0	1/1:2,13:15:39.07:435,39,0	1/1:2,19:21:48.13:544,48,0	1/1:0,13:13:39.12:450,39,0	1/1:1,16:17:45.13:519,45,0	0/0:30,0:30:81.02:0,81,734	1/1:12,16:28:66.14:721,66,0	0/0:22,0:22:47.96:0,48,429
chr10	103032548	.	AT	A	2141.44	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.475;DP=539;FS=14.574;HRun=11;HaplotypeScore=84.4582;InbreedingCoeff=0.8806;MQ=65.49;MQ0=0;MQRankSum=0.560;QD=18.78;ReadPosRankSum=-1.716;VQSLOD=2.7734;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:67.31:0,67,682	0/0:10,1:11:5.43:0,5,263	0/0:8,0:7:0.80:0,1,90	0/0:5,0:5:5.34:0,5,24	0/0:29,0:31:68.95:0,69,697	0/0:16,1:17:17.46:0,17,391	0/0:8,1:11:23.88:0,24,231	1/1:4,20:24:61.13:489,61,0	0/0:12,0:12:30.08:0,30,320	0/0:27,1:29:38.35:0,38,598	0/0:19,0:20:50.96:0,51,525	0/0:12,0:12:23.89:0,24,238	0/0:21,0:21:60.14:0,60,633	0/0:17,0:17:36.08:0,36,375	0/0:5,0:15:37.42:0,37,215	0/0:10,0:10:27.05:0,27,275	0/0:18,2:20:29.44:0,29,500	0/0:28,0:29:72:0,72,742	1/1:7,18:25:27.95:436,28,0	1/1:5,20:25:65.89:539,66,0	1/1:2,9:12:29:228,29,0	0/0:23,0:25:62.06:0,62,657	0/0:22,1:24:23.47:0,23,449	0/0:12,0:12:30.06:0,30,313	0/0:24,1:25:8.74:0,9,455	0/0:26,1:27:32.50:0,32,551	1/1:3,25:28:77.13:623,77,0	0/0:20,0:21:53.96:0,54,551
chr10	103032641	.	TG	T	5564.50	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=13.766;DP=617;FS=2.712;HRun=5;HaplotypeScore=87.7016;InbreedingCoeff=0.9933;MQ=71.07;MQ0=5;MQRankSum=-1.076;QD=16.46;ReadPosRankSum=1.355;VQSLOD=4.5526;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:50.59:215,51,0	1/1:10,0:10:16.44:78,16,0	0/0:35,0:21:31.62:0,32,428	0/0:34,0:17:23.64:0,24,358	0/0:26,0:26:75.22:0,75,987	1/1:17,0:17:44.68:213,45,0	1/1:14,0:14:35.77:169,36,0	1/1:1,14:15:41.93:392,42,0	1/1:24,0:24:50.51:237,51,0	0/0:32,0:32:93.24:0,93,1177	0/0:12,0:12:36.07:0,36,437	0/0:23,0:23:69.23:0,69,941	1/1:16,0:16:12.56:143,13,0	1/1:15,0:15:30.73:152,31,0	1/1:23,0:23:47.72:236,48,0	0/0:16,0:16:45.13:0,45,584	0/0:40,0:40:99:0,114,1486	1/1:19,0:19:46.69:215,47,0	1/1:11,20:31:87.11:902,87,0	1/1:6,16:22:60.11:637,60,0	1/1:1,13:14:33.03:358,33,0	1/1:18,0:18:30.59:179,31,0	1/1:17,1:19:42.60:213,43,0	1/1:17,0:17:37.67:159,38,0	1/1:8,1:9:25.39:128,25,0	0/0:36,0:36:99:0,102,1287	1/1:4,26:30:84.23:939,84,0	0/0:24,0:24:63.20:0,63,843
chr10	103032645	.	G	GT	5723.19	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=6.833;DP=619;FS=5.093;HRun=0;HaplotypeScore=87.3038;InbreedingCoeff=0.9908;MQ=67.45;MQ0=5;MQRankSum=-0.264;QD=24.35;ReadPosRankSum=2.286;VQSLOD=5.8559;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:29:58.73:626,59,0	1/1:0,10:10:20.89:217,21,0	0/0:37,0:19:29.02:0,29,566	0/0:33,0:16:41.67:0,42,476	0/0:26,0:26:78.09:0,78,1056	1/1:1,17:18:43.16:495,43,0	1/1:1,13:14:38.28:410,38,0	0/0:15,0:15:24.80:0,25,116	1/1:4,21:26:54.89:574,55,0	0/0:31,0:31:93.31:0,93,1285	0/0:12,0:12:36.12:0,36,496	0/0:24,0:24:69.23:0,69,964	1/1:3,14:17:21.66:372,22,0	1/1:2,14:16:32.93:345,33,0	1/1:2,21:23:42.88:569,43,0	0/0:15,0:15:45.14:0,45,613	0/0:40,0:40:99:0,117,1576	1/1:1,19:20:47.88:533,48,0	0/0:30,0:30:33.96:0,34,203	0/0:20,0:20:41.88:0,42,181	0/0:13,0:13:28.86:0,29,127	1/1:2,15:17:9.62:329,10,0	1/1:7,12:19:48.49:537,48,0	1/1:0,17:17:42.11:455,42,0	1/1:2,7:9:21.51:259,22,0	0/0:35,0:35:99:0,105,1413	0/0:30,0:29:75.79:0,76,319	0/0:23,0:23:69.20:0,69,925
chr10	103032930	.	CGTG	C	1118.16	PASS	AB=1.000;AC=25;AF=0.543;AN=46;BaseQRankSum=0.663;DP=347;FS=7.698;HRun=0;HaplotypeScore=53.6394;InbreedingCoeff=0.5558;MQ=83.16;MQ0=2;MQRankSum=-1.129;QD=6.66;ReadPosRankSum=3.386;VQSLOD=0.9038;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,3:19:9.03:117,9,0	1/1:5,0:5:3.01:39,3,0	./.	./.	0/0:11,0:11:9.03:0,9,151	1/1:10,2:12:3.01:39,3,0	1/1:11,2:13:6.02:78,6,0	0/0:8,0:8:0:0,0,0	1/1:8,4:12:9.03:117,9,0	0/1:15,0:15:25.33:25,0,133	0/0:7,0:7:12.04:0,12,197	0/0:21,0:21:18.06:0,18,319	1/1:10,3:12:6.02:78,6,0	1/1:8,4:12:15.05:196,15,0	./.	0/0:11,0:11:12.04:0,12,229	0/0:13,0:13:6.49:0,6,75	1/1:16,3:19:9.03:117,9,0	0/0:8,0:8:3.01:0,3,44	./.	0/0:24,0:24:3.01:0,3,39	1/1:6,3:9:6.02:78,6,0	1/1:5,2:7:2.89:39,3,0	1/1:14,7:21:21.07:274,21,0	1/1:5,6:11:6.02:78,6,0	0/0:11,0:11:9.03:0,9,163	0/0:7,0:7:2.96:0,3,19	./.
chr10	103033320	.	A	AG	10499.87	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-17.959;DP=820;FS=3.168;HRun=3;HaplotypeScore=74.0828;InbreedingCoeff=0.9996;MQ=81.11;MQ0=0;MQRankSum=-9.023;QD=35.23;ReadPosRankSum=5.002;VQSLOD=5.3561;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,46:48:99:1721,123,0	1/1:0,10:10:24.08:336,24,0	0/0:31,0:32:92.08:0,92,1068	0/0:18,0:18:47.95:0,48,532	0/0:23,0:23:66.19:0,66,781	1/1:1,26:27:63.21:882,63,0	1/1:0,24:24:66.22:924,66,0	0/0:39,0:39:99:0,102,1215	1/1:1,35:36:93.31:1302,93,0	0/0:40,0:40:99:0,111,1304	0/0:18,0:18:54.17:0,54,648	0/0:49,0:49:99:0,135,1605	1/1:2,18:20:48.16:672,48,0	1/1:2,31:33:87.29:1218,87,0	0/0:32,0:32:90.28:0,90,1080	0/0:44,1:45:87.36:0,87,1447	0/0:33,0:33:93.28:0,93,1115	1/1:4,11:15:30.10:420,30,0	0/0:22,0:22:51.15:0,51,603	0/0:17,0:17:48.13:0,48,564	0/0:85,0:85:99:0,238,2825	1/1:2,23:25:66.22:924,66,0	1/1:0,16:16:48.16:672,48,0	1/1:1,27:28:66.22:924,66,0	1/1:3,13:16:36.12:504,36,0	0/0:28,0:28:81.25:0,81,972	0/0:18,0:18:45.14:0,45,540	0/0:23,0:23:66.20:0,66,792
chr10	103033763	.	TATCA	T	14168.78	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=12.832;DP=647;FS=13.223;HRun=0;HaplotypeScore=158.1879;InbreedingCoeff=0.9987;MQ=60.54;MQ0=0;MQRankSum=0.386;QD=36.14;ReadPosRankSum=3.387;VQSLOD=4.6458;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,15:21:47.14:737,47,0	1/1:5,10:15:42.10:711,42,0	0/0:26,0:26:49.44:0,49,1184	0/0:21,0:20:47.95:0,48,869	0/0:34,0:34:96.26:0,96,2232	1/1:4,16:20:45:831,45,0	1/1:8,7:15:22.38:413,22,0	1/1:5,39:44:99:1666,117,0	1/1:9,13:22:45.12:758,45,0	0/0:34,0:34:96.31:0,96,2391	0/0:23,0:23:54.16:0,54,1308	0/0:20,0:20:57.15:0,57,1271	1/1:3,18:21:37.69:723,38,0	1/1:3,10:13:21.07:391,21,0	1/1:5,17:22:36.12:671,36,0	0/0:25,0:25:75.23:0,75,1811	0/0:23,0:23:62.94:0,63,1562	1/1:4,8:12:30.88:478,31,0	1/1:7,6:11:30.08:473,30,0	1/1:6,20:26:39.18:757,39,0	1/1:7,14:21:50.98:846,51,0	1/1:12,13:25:38.86:656,39,0	1/1:7,19:26:60.16:1062,60,0	1/1:6,16:22:29.43:609,29,0	1/1:5,16:21:48.13:819,48,0	0/0:29,0:29:78.13:0,78,1978	1/1:6,27:33:90.03:1568,90,0	0/0:20,0:20:60.16:0,60,1380
chr10	103033823	.	TATCTATCTATCTATC	T	183.86	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=2.684;DP=594;FS=1.268;HRun=0;HaplotypeScore=272.4880;InbreedingCoeff=0.3988;MQ=51.83;MQ0=4;MQRankSum=-3.600;QD=2.55;ReadPosRankSum=-1.513;VQSLOD=2.3392;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:19:1.67:2,0,111	0/0:5,0:5:6.02:0,6,99	0/0:23,0:12:8.93:0,9,156	0/0:15,0:7:9.03:0,9,286	0/0:23,0:23:60.19:0,60,2779	0/0:14,0:14:15.05:0,15,242	0/0:9,0:9:6.02:0,6,97	0/0:36,0:36:43.68:0,44,457	0/0:28,0:28:30.03:0,30,489	0/0:33,0:33:82.47:0,82,3542	0/0:16,0:16:36.10:0,36,1777	0/0:27,0:27:72.20:0,72,3789	0/0:16,0:16:8.02:0,8,114	0/0:13,0:13:3.01:0,3,50	1/1:9,19:28:11.95:219,12,0	0/0:33,0:33:81.24:0,81,4399	0/0:20,0:20:8.48:0,8,447	0/1:9,0:9:28.96:29,0,261	0/0:17,0:17:44.98:0,45,1174	0/0:37,0:37:57.62:0,58,2298	0/0:16,0:16:29.86:0,30,788	1/1:14,0:14:3.01:46,3,0	0/0:28,0:28:2.95:0,3,46	0/0:15,0:15:0:0,0,0	0/0:15,0:15:6.02:0,6,93	0/0:32,0:31:60.20:0,60,3128	0/0:35,0:33:69.24:0,69,2595	0/0:16,0:16:36.12:0,36,2201
chr10	103033831	.	TATCTATC	T	3004.18	PASS	AB=0.938;AC=25;AF=0.446;AN=56;BaseQRankSum=5.038;DP=596;FS=37.306;HRun=0;HaplotypeScore=192.3938;InbreedingCoeff=0.3349;MQ=52.16;MQ0=4;MQRankSum=-7.647;QD=9.75;ReadPosRankSum=-5.044;VQSLOD=-0.4984;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,7:19:69.96:108,0,70	1/1:2,5:7:6.02:150,6,0	0/0:21,0:11:17.72:0,18,247	0/0:17,0:10:21.07:0,21,471	0/0:23,0:23:63.22:0,63,2197	1/1:5,11:16:15.05:374,15,0	1/1:1,6:7:5.77:149,6,0	0/1:36,0:36:23.45:578,0,23	1/1:3,26:29:29.70:748,30,0	0/0:32,0:32:81.19:0,81,2572	0/0:15,0:15:42.14:0,42,1269	0/0:27,0:27:78.25:0,78,2433	1/1:3,16:19:12.93:243,13,0	1/1:1,13:14:2.93:75,3,0	0/0:27,0:27:9.11:0,9,213	0/0:32,0:32:87.30:0,87,2981	0/1:18,0:18:14.29:14,0,232	0/1:7,2:9:94.80:217,0,95	0/1:20,0:20:99:207,0,154	0/1:39,0:39:13.08:13,0,360	0/1:16,0:16:43.47:43,0,112	1/1:3,9:12:2.52:45,3,0	1/1:7,21:28:2.60:74,3,0	0/0:3,8:11:0:0,0,0	1/1:5,12:17:5.50:149,6,0	0/0:34,0:33:87.30:0,87,2581	0/0:34,0:33:68.59:0,69,502	0/0:14,0:14:39.13:0,39,1359
chr10	103033835	.	TATC	T	5752.22	PASS	AB=0.988;AC=32;AF=0.571;AN=56;BaseQRankSum=10.792;DP=569;FS=9.208;HRun=0;HaplotypeScore=145.9584;InbreedingCoeff=0.6329;MQ=50.98;MQ0=4;MQRankSum=-3.115;QD=17.48;ReadPosRankSum=0.720;VQSLOD=4.0042;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,1:18:46.26:61,0,46	1/1:7,0:7:6:54,6,0	0/0:22,0:13:22.73:0,23,314	0/0:16,0:8:21.07:0,21,361	0/0:24,0:24:66.23:0,66,1388	1/1:16,0:16:15.01:135,15,0	1/1:7,0:7:5.94:54,6,0	1/1:4,28:32:81.27:1224,81,0	1/1:28,0:28:29.69:269,30,0	0/0:33,0:33:86.27:0,86,1684	0/0:14,0:14:42.14:0,42,807	0/0:27,0:27:81.26:0,81,1558	1/1:19,0:19:11.86:145,12,0	1/1:14,0:14:2.82:27,3,0	0/0:26,0:26:20.94:0,21,247	0/0:31,0:31:90.31:0,90,1876	0/1:16,0:16:36.04:36,0,93	0/1:9,0:9:37.43:109,0,37	1/1:2,16:18:51.17:816,51,0	1/1:6,30:36:66.15:1086,66,0	1/1:6,8:14:25.99:454,26,0	1/1:11,0:11:2.87:46,3,0	1/1:24,0:24:2.52:27,3,0	0/1:11,0:11:0.02:0,0,0	1/1:14,0:14:5.76:61,6,0	0/0:33,0:32:93.32:0,93,1770	1/1:2,31:33:69.24:1148,69,0	0/0:14,0:14:39.13:0,39,832
chr10	103033838	.	C	CT	2435.99	PASS	AB=0.798;AC=31;AF=0.554;AN=56;BaseQRankSum=11.090;DP=552;FS=16.947;HRun=1;HaplotypeScore=135.3824;InbreedingCoeff=0.6362;MQ=51.12;MQ0=4;MQRankSum=-3.996;QD=7.96;ReadPosRankSum=-0.044;VQSLOD=-0.3389;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,4:16:12.43:92,0,12	0/0:5,0:5:0.94:0,1,2	0/0:24,0:14:21.95:0,22,313	0/0:15,0:7:21.07:0,21,284	0/0:25,0:25:72.21:0,72,973	1/1:11,1:12:7.96:41,8,0	1/1:6,1:7:2.80:15,3,0	1/1:29,0:29:75.97:1063,76,0	1/1:27,2:29:5.12:40,5,0	0/0:31,1:32:48.13:0,48,1204	0/0:14,0:14:42.14:0,42,587	0/0:27,0:27:81.26:0,81,1116	1/1:17,2:19:10.72:125,11,0	1/1:16,1:17:2.39:19,2,0	0/0:26,0:26:11.89:0,12,183	0/0:31,0:31:93.31:0,93,1299	0/1:4,8:15:61.94:186,0,62	1/1:7,1:8:4.09:89,4,0	1/1:18,1:19:38.30:432,38,0	1/1:31,2:33:32.69:188,33,0	1/1:11,3:14:17.29:174,17,0	1/1:9,0:9:2.34:45,2,0	1/1:21,1:22:2.54:15,3,0	0/1:10,0:10:0.02:0,0,0	1/1:12,2:14:5.69:30,6,0	0/0:34,0:33:96.31:0,96,1328	1/1:31,0:30:30.44:73,30,0	0/0:13,0:13:39.13:0,39,545
chr10	103033881	.	ATC	A	228.12	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.157;DP=627;FS=5.642;HRun=0;HaplotypeScore=145.7226;InbreedingCoeff=0.8742;MQ=66.37;MQ0=0;MQRankSum=-1.550;QD=16.29;ReadPosRankSum=2.145;VQSLOD=3.6984;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:29.99:0,30,540	0/0:8,0:8:12.04:0,12,232	0/0:28,0:26:65.51:0,66,1136	0/0:19,0:19:44.66:0,45,796	0/0:35,0:35:99:0,102,1918	0/0:21,0:21:39.13:0,39,753	0/0:10,0:10:21.03:0,21,367	0/0:40,0:40:99:0,117,2177	0/0:33,0:33:42.14:0,42,768	0/0:32,0:32:93.30:0,93,1731	0/0:18,0:18:54.17:0,54,987	0/0:25,0:25:75.26:0,75,1448	0/0:36,0:36:63.21:0,63,1170	0/0:19,0:19:18.01:0,18,309	0/0:29,0:29:30.10:0,30,579	0/0:23,0:23:66.23:0,66,1275	1/1:1,13:14:20.56:320,21,0	0/0:20,0:20:45.15:0,45,868	0/0:13,0:13:36.12:0,36,689	0/0:27,0:27:69.23:0,69,1324	0/0:15,0:15:30.10:0,30,580	0/0:19,0:19:41.97:0,42,811	0/0:21,0:21:27.09:0,27,506	0/0:12,0:12:8.86:0,9,174	0/0:17,0:17:12.03:0,12,232	0/0:32,0:32:96.33:0,96,1834	0/0:36,0:35:75.24:0,75,1356	0/0:9,0:9:27.09:0,27,522
chr10	103033939	.	C	CT	1650.36	PASS	AB=0.781;AC=17;AF=0.304;AN=56;BaseQRankSum=9.312;DP=635;FS=1.434;HRun=1;HaplotypeScore=173.9492;InbreedingCoeff=-0.4369;MQ=54.06;MQ0=6;MQRankSum=-5.824;QD=4.51;ReadPosRankSum=-2.353;VQSLOD=-0.6765;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,5:19:24.02:24,0,152	0/1:7,6:13:99:167,0,138	0/1:22,1:12:9.20:9,0,351	0/0:18,0:17:35.86:0,36,465	0/0:37,0:37:99:0,105,1434	0/1:22,3:25:91.52:92,0,298	0/1:8,5:13:36.17:36,0,90	0/1:22,8:30:99:312,0,689	0/0:16,5:21:15.52:0,16,345	0/0:34,0:33:99:0,99,1343	0/0:29,0:28:81.27:0,81,1133	0/0:18,0:18:51.17:0,51,713	0/1:32,2:34:77.55:78,0,591	0/1:8,3:11:67.41:99,0,67	0/1:7,0:23:19.55:20,0,253	0/0:30,0:30:90.29:0,90,1240	0/1:9,4:13:99:119,0,169	0/1:19,4:24:87.74:88,0,398	0/1:9,1:17:99:161,0,202	0/1:16,4:36:90.56:91,0,314	0/0:4,0:21:11.87:0,12,140	0/1:14,4:18:99:106,0,286	0/1:10,6:16:99:154,0,261	0/0:8,2:11:11.96:0,12,165	0/1:19,2:21:99:208,0,138	0/0:34,1:32:45.63:0,46,1197	0/1:17,2:26:48.85:49,0,417	0/0:12,0:13:36.54:0,37,481
chr10	103034355	.	CGGTA	C	17700.49	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=10.864;DP=614;FS=2.492;HRun=0;HaplotypeScore=114.6520;InbreedingCoeff=0.9983;MQ=82.56;MQ0=0;MQRankSum=-4.690;QD=40.41;ReadPosRankSum=5.489;VQSLOD=5.0651;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,34:39:74.54:1378,75,0	1/1:1,14:15:27.09:497,27,0	0/0:14,0:14:36.09:0,36,853	0/0:24,0:24:54.31:0,54,1255	0/0:21,0:21:60.21:0,60,1549	1/1:1,19:20:54.18:993,54,0	1/1:3,22:25:60.21:1100,60,0	1/1:6,19:25:54.18:974,54,0	1/1:1,19:20:48.16:883,48,0	0/0:17,0:17:45.15:0,45,1181	0/0:18,0:18:51.18:0,51,1341	0/0:19,0:19:54.19:0,54,1391	1/1:1,13:14:36.12:661,36,0	1/1:4,20:24:51.17:938,51,0	1/1:2,10:12:24.08:441,24,0	0/0:21,0:21:60.21:0,60,1514	1/1:1,35:36:87.26:1565,87,0	1/1:0,28:28:69.24:1269,69,0	1/1:1,10:11:21.07:386,21,0	1/1:1,25:26:66.23:1213,66,0	1/1:7,31:38:78.74:1436,79,0	1/1:2,12:14:24.08:441,24,0	1/1:2,14:16:36.12:656,36,0	1/1:3,34:37:72.25:1324,72,0	1/1:2,12:14:27.09:497,27,0	0/0:20,0:20:54.19:0,54,1410	1/1:3,21:24:57.20:1048,57,0	0/0:22,0:22:66.20:0,66,1617
chr10	103035757	.	CTGTG	C	2710.45	PASS	AB=0.706;AC=23;AF=0.442;AN=52;BaseQRankSum=4.051;DP=659;FS=0.604;HRun=0;HaplotypeScore=100.5192;InbreedingCoeff=0.8621;MQ=61.75;MQ0=25;MQRankSum=0.665;QD=10.19;ReadPosRankSum=1.586;VQSLOD=2.9795;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,12:39:18.05:282,18,0	1/1:6,5:11:12.04:188,12,0	./.	./.	0/0:22,0:28:23.80:0,24,462	1/1:17,7:24:11.50:168,12,0	1/1:19,10:28:18.06:282,18,0	0/0:17,0:17:15.05:0,15,332	1/1:7,6:14:12.03:169,12,0	0/0:24,0:24:30.01:0,30,501	0/0:15,0:17:26.55:0,27,435	0/0:11,0:11:12.01:0,12,192	1/1:20,6:28:18.05:243,18,0	1/1:8,6:12:14.75:207,15,0	0/0:17,0:26:18.95:0,19,349	0/0:18,0:18:26.83:0,27,546	0/0:22,1:30:23.43:0,23,162	0/1:14,10:23:14.32:304,0,14	0/0:14,0:16:9.03:0,9,193	0/0:20,0:28:9.03:0,9,157	0/0:17,0:26:12.04:0,12,232	1/1:11,8:20:21.06:309,21,0	1/1:10,5:16:15.04:216,15,0	1/1:14,7:22:18.05:262,18,0	1/1:13,9:24:21.06:290,21,0	0/0:13,0:13:12.03:0,12,236	0/0:15,0:24:18.41:0,18,348	0/0:12,0:12:18.53:0,19,398
chr10	103036260	.	CAT	C	282.77	PASS	AB=0.776;AC=2;AF=0.036;AN=56;BaseQRankSum=-4.422;DP=338;FS=22.650;HRun=0;HaplotypeScore=155.3536;InbreedingCoeff=0.0263;MQ=88.88;MQ0=0;MQRankSum=5.726;QD=6.15;ReadPosRankSum=-2.551;VQSLOD=1.2024;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:20.22:0,20,84	0/0:3,0:3:8.52:0,9,42	0/1:11,5:15:99:145,0,248	0/1:22,7:29:95.89:225,0,96	0/0:16,0:16:12.91:0,13,50	0/0:15,0:15:24.61:0,25,95	0/0:7,0:7:2.69:0,3,8	0/0:15,0:15:43.92:0,44,281	0/0:9,0:9:12.20:0,12,45	0/0:6,0:6:16.12:0,16,97	0/0:6,0:6:2.22:0,2,7	0/0:9,0:9:9.78:0,10,36	0/0:10,0:10:7.09:0,7,25	0/0:9,0:9:12.81:0,13,56	0/0:20,0:20:21.58:0,22,87	0/0:14,0:14:27.52:0,28,110	0/0:13,0:13:14.65:0,15,55	0/0:4,0:4:11.47:0,11,66	0/0:12,0:12:34.95:0,35,210	0/0:7,0:7:15.32:0,15,68	0/0:11,0:11:11.57:0,12,69	0/0:15,0:15:12.11:0,12,53	0/0:12,0:12:14.61:0,15,68	0/0:11,0:10:5.26:0,5,15	0/0:12,0:12:17.53:0,18,69	0/0:17,0:17:48.33:0,48,255	0/0:17,0:17:28.55:0,29,126	0/0:4,0:4:11.35:0,11,62
chr10	103036265	.	GT	G	7168.19	PASS	AB=0.742;AC=54;AF=0.964;AN=56;BaseQRankSum=-1.147;DP=318;FS=19.325;HRun=1;HaplotypeScore=122.9174;InbreedingCoeff=-0.0684;MQ=92.91;MQ0=0;MQRankSum=-6.085;QD=22.54;ReadPosRankSum=2.746;VQSLOD=3.7331;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:18:32.90:351,33,0	1/1:1,1:2:6.02:72,6,0	0/1:12,8:19:99:279,0,232	0/1:21,9:29:99:305,0,232	1/1:0,14:14:14.87:209,15,0	1/1:1,14:15:30.06:397,30,0	1/1:0,5:5:5.71:83,6,0	1/1:0,13:13:39.13:543,39,0	1/1:0,8:8:15.05:209,15,0	1/1:1,5:6:18.06:248,18,0	1/1:0,6:6:3.01:42,3,0	1/1:0,9:9:17.97:207,18,0	1/1:0,8:8:12:145,12,0	1/1:0,8:8:17.93:185,18,0	1/1:0,19:19:32.98:395,33,0	1/1:1,12:13:38.98:458,39,0	1/1:1,12:13:20.64:272,21,0	1/1:0,4:4:12.01:147,12,0	1/1:1,9:10:30.09:403,30,0	1/1:0,7:7:15.05:209,15,0	1/1:3,7:10:8.52:85,9,0	1/1:0,14:14:12.04:167,12,0	1/1:1,11:12:12.02:151,12,0	1/1:0,9:9:4.36:60,4,0	1/1:0,11:11:23.95:269,24,0	1/1:0,16:16:48.16:670,48,0	1/1:0,14:14:33.07:439,33,0	1/1:0,4:4:12.04:168,12,0
chr10	103037115	.	A	ACCCT	792.46	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.283;DP=562;FS=2.217;HRun=0;HaplotypeScore=93.6863;InbreedingCoeff=0.9408;MQ=76.85;MQ0=0;MQRankSum=-1.088;QD=28.30;ReadPosRankSum=-0.779;VQSLOD=3.0087;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:60.14:0,60,919	0/0:6,0:6:18.06:0,18,294	0/0:19,0:18:14.44:0,14,400	0/0:21,0:22:14.34:0,14,329	0/0:20,0:20:57.16:0,57,898	0/0:20,0:20:42.14:0,42,699	0/0:34,0:34:60.17:0,60,952	0/0:18,0:18:18.06:0,18,300	0/0:31,0:31:84.27:0,84,1373	0/0:20,0:20:39.13:0,39,645	0/0:14,0:14:33.11:0,33,549	0/0:19,0:19:48.15:0,48,774	0/0:17,0:17:45.14:0,45,719	0/0:22,0:22:54.18:0,54,898	0/0:18,0:18:30.10:0,30,499	0/0:18,0:18:45.14:0,45,723	1/1:14,13:28:36.12:887,36,0	0/0:17,0:17:36.12:0,36,599	0/0:20,0:20:18.44:0,18,391	0/0:23,0:23:66.23:0,66,1096	0/0:19,0:19:48.16:0,48,799	0/0:14,0:14:33.10:0,33,523	0/0:12,0:12:33.11:0,33,549	0/0:23,0:22:42.14:0,42,699	0/0:25,0:25:66.19:0,66,1045	0/0:15,0:14:27.09:0,27,447	0/0:23,0:23:57.15:0,57,858	0/0:13,0:13:33.11:0,33,549
chr10	103038261	.	G	GCACA	4515.60	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=12.183;DP=829;FS=7.720;HRun=0;HaplotypeScore=201.7404;InbreedingCoeff=0.1032;MQ=55.12;MQ0=9;MQRankSum=-3.372;QD=9.55;ReadPosRankSum=-0.837;VQSLOD=2.8965;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:38:27.28:27,0,272	0/1:13,0:13:63.68:64,0,102	0/0:32,0:19:48.13:0,48,778	0/0:30,0:14:35.84:0,36,433	0/0:28,0:27:59.80:0,60,667	0/1:19,0:18:15.98:16,0,305	0/0:26,0:26:4.60:0,5,529	1/1:27,0:29:2.66:351,3,0	0/1:32,0:31:55.05:55,0,442	0/0:37,0:37:99:0,105,1712	0/0:14,0:14:36.04:0,36,586	0/0:48,0:48:99:0,126,2192	0/1:22,0:22:91.58:92,0,190	0/1:33,0:32:93.98:94,0,411	0/1:38,0:38:99:330,0,471	0/0:30,0:30:80.85:0,81,1411	0/1:33,0:32:99:412,0,101	0/1:22,0:22:99:108,0,226	1/1:13,0:15:6.89:185,7,0	1/1:4,17:28:25.16:504,25,0	1/1:72,11:95:46.88:1889,47,0	0/0:21,0:21:1.71:0,2,300	0/0:15,0:15:0.59:0,1,148	0/0:26,0:25:12.30:0,12,182	0/1:28,0:27:23.25:23,0,485	0/0:31,0:31:87.13:0,87,1344	1/1:7,11:26:21.88:366,22,0	0/0:18,0:18:54.17:0,54,899
chr10	103038263	.	G	GCACACACACACA	5754.78	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=2.611;DP=879;FS=2.075;HRun=0;HaplotypeScore=299.1284;InbreedingCoeff=0.4233;MQ=54.96;MQ0=10;MQRankSum=-3.614;QD=10.37;ReadPosRankSum=-4.226;VQSLOD=2.5821;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:40:20.24:331,20,0	1/1:3,0:15:9.03:350,9,0	0/0:30,0:17:6.01:0,6,75	0/1:29,0:14:45.33:74,0,45	0/0:13,0:27:29.54:0,30,490	1/1:19,0:18:12.04:231,12,0	1/1:16,9:37:3.01:165,3,0	0/1:34,0:34:53.79:308,0,54	1/1:15,14:38:12.04:645,12,0	0/0:32,0:35:60.02:0,60,1508	0/0:13,0:13:32.77:0,33,650	0/0:43,0:46:87.31:0,87,2353	1/1:6,11:27:16.30:712,16,0	1/1:12,18:37:12.04:645,12,0	1/1:17,0:37:22.96:322,23,0	0/0:26,0:30:57.17:0,57,1581	0/0:6,0:33:27.24:0,27,107	1/1:12,8:25:16.19:530,16,0	0/1:14,0:13:71:173,0,71	0/1:25,0:25:24.15:24,0,68	0/1:96,0:95:99:800,0,337	1/1:10,9:21:3.01:176,3,0	0/0:5,9:23:0.36:0,0,1	0/0:14,11:35:0.47:0,0,2	1/1:13,2:33:6.01:213,6,0	0/0:27,0:31:49.25:0,49,1144	0/1:23,0:23:15.63:57,0,16	0/0:16,0:18:33.11:0,33,776
chr10	103039003	.	GAA	G	6881.39	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-2.416;DP=592;FS=5.669;HRun=12;HaplotypeScore=86.6205;InbreedingCoeff=0.9215;MQ=71.15;MQ0=2;MQRankSum=-1.000;QD=23.01;ReadPosRankSum=5.212;VQSLOD=4.6549;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,35:45:99:975,101,0	1/1:2,10:13:29.79:287,30,0	0/1:13,0:11:2.10:2,0,252	0/0:12,0:11:14.75:0,15,165	0/0:20,0:20:54.18:0,54,801	1/1:3,25:29:62.84:622,63,0	1/1:5,25:30:69.14:702,69,0	0/0:11,0:36:67.19:0,67,252	1/1:1,26:27:75.17:763,75,0	0/0:21,0:22:56.67:0,57,796	0/0:14,0:16:35.54:0,36,437	0/0:31,0:32:90.30:0,90,1326	1/1:1,13:14:36.06:366,36,0	1/1:1,13:13:33.07:336,33,0	0/0:3,0:19:29.94:0,30,105	0/0:13,0:14:38.62:0,39,546	1/1:4,17:21:51.10:518,51,0	1/1:3,20:23:57.11:580,57,0	0/0:7,1:16:1.57:0,2,142	0/0:3,0:20:42.30:0,42,148	0/0:5,0:32:60.96:0,61,228	1/1:1,15:17:44.82:439,45,0	1/1:4,20:24:56.70:579,57,0	1/1:1,17:18:42.09:427,42,0	1/1:0,10:11:29.81:287,30,0	0/0:18,0:20:54.17:0,54,773	0/0:1,1:21:14.91:0,15,118	0/0:10,0:13:31.57:0,32,379
chr10	103039521	.	A	AC	13878.97	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=18.851;DP=615;FS=7.426;HRun=0;HaplotypeScore=115.0702;InbreedingCoeff=0.9999;MQ=89.82;MQ0=0;MQRankSum=-7.018;QD=42.06;ReadPosRankSum=2.662;VQSLOD=4.3455;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,42:44:99:1768,111,0	1/1:0,12:12:33.11:525,33,0	0/0:31,0:31:70.73:0,71,1145	0/0:21,0:21:57.09:0,57,748	0/0:17,0:17:48.16:0,48,671	1/1:0,25:25:72.25:1145,72,0	1/1:3,19:22:60.20:954,60,0	0/0:27,0:27:81.26:0,81,1104	1/1:2,20:22:54.18:848,54,0	0/0:23,0:23:69.22:0,69,937	0/0:15,0:15:45.15:0,45,628	0/0:14,0:14:42.11:0,42,553	1/1:4,16:20:45.15:697,45,0	1/1:1,18:19:51.17:811,51,0	1/1:0,12:12:33.11:519,33,0	0/0:17,0:17:48.16:0,48,671	1/1:2,37:39:99:1661,105,0	1/1:0,32:32:93.32:1481,93,0	0/0:25,0:25:75.25:0,75,1045	0/0:18,0:18:54.18:0,54,755	0/0:17,0:17:51.17:0,51,713	1/1:0,21:21:60.20:948,60,0	1/1:3,18:21:54.18:856,54,0	1/1:1,21:22:54.18:859,54,0	1/1:1,18:19:51.17:808,51,0	0/0:24,0:24:72.24:0,72,1006	0/0:24,0:23:69.23:0,69,964	0/0:12,0:12:36.12:0,36,503
chr10	103040071	.	GGAATGAATGAATGAATGAAT	G	12417.02	PASS	AB=0.704;AC=30;AF=0.536;AN=56;BaseQRankSum=10.478;DP=669;FS=6.982;HRun=0;HaplotypeScore=350.6234;InbreedingCoeff=0.5975;MQ=67.49;MQ0=1;MQRankSum=-10.455;QD=31.60;ReadPosRankSum=3.042;VQSLOD=2.1567;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,15:32:21.16:1207,21,0	1/1:9,6:15:12.38:798,12,0	0/0:29,0:25:13.04:0,13,492	0/0:15,0:12:6.01:0,6,245	0/0:39,0:39:84.28:0,84,6363	1/1:10,16:26:33.11:1765,33,0	1/1:14,0:14:6.02:167,6,0	0/1:18,0:28:10.97:11,0,239	1/1:17,11:28:21.07:1123,21,0	0/0:24,0:24:42.14:0,42,3471	0/0:19,0:19:45.15:0,45,3836	0/0:30,0:31:69.22:0,69,5441	1/1:10,5:15:12.04:642,12,0	1/1:11,9:20:24.08:1282,24,0	0/0:17,0:30:44.78:0,45,469	0/0:20,0:20:48.16:0,48,3834	1/1:15,0:26:1.42:407,1,0	1/1:9,7:16:4.93:630,5,0	0/1:16,0:28:99:435,0,138	0/1:13,0:26:99:374,0,187	0/0:18,0:22:12.03:0,12,150	1/1:17,8:25:18.06:962,18,0	1/1:12,11:23:16.41:1113,16,0	1/1:9,5:14:3.01:160,3,0	1/1:9,10:19:15.05:802,15,0	0/0:27,0:27:57.20:0,57,4722	0/1:22,0:37:99:540,0,243	0/0:20,0:20:36.12:0,36,3038
chr10	103041031	.	TAC	T	4940.90	PASS	AB=0.793;AC=25;AF=0.446;AN=56;BaseQRankSum=11.188;DP=897;FS=3.848;HRun=0;HaplotypeScore=264.5024;InbreedingCoeff=0.9356;MQ=50.72;MQ0=14;MQRankSum=-4.805;QD=13.04;ReadPosRankSum=0.731;VQSLOD=4.5020;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,15:32:24.04:289,24,0	1/1:9,4:13:17.89:162,18,0	0/0:44,0:17:17.97:0,18,196	0/0:52,0:19:24.03:0,24,354	0/0:26,0:27:60.19:0,60,945	1/1:13,13:27:53.96:613,54,0	1/1:32,7:40:12.84:329,13,0	0/0:30,0:28:48.15:0,48,727	1/1:34,13:45:59.93:667,60,0	0/0:60,0:63:99:0,156,2375	0/0:16,0:16:45.15:0,45,725	0/0:46,1:47:68.93:0,69,1560	1/1:17,13:29:63.05:693,63,0	1/1:22,12:32:38.40:396,38,0	1/1:15,14:29:50.97:576,51,0	0/0:31,0:31:63.20:0,63,993	0/0:29,0:28:42.38:0,42,576	0/1:17,6:20:4.47:260,0,4	0/0:15,0:12:26.96:0,27,401	0/0:19,0:19:36.05:0,36,487	0/0:83,0:77:49.71:0,50,762	1/1:15,8:23:18.01:199,18,0	1/1:6,8:14:21.05:238,21,0	1/1:27,13:39:15.01:166,15,0	1/1:11,13:24:33.05:352,33,0	0/0:40,1:39:50.85:0,51,1227	0/0:11,0:11:21:0,21,283	0/0:10,0:10:27.09:0,27,428
chr10	103041048	.	A	ATG	5079.45	PASS	AB=0.791;AC=17;AF=0.304;AN=56;BaseQRankSum=11.500;DP=974;FS=6.637;HRun=0;HaplotypeScore=289.2050;InbreedingCoeff=0.2547;MQ=44.40;MQ0=37;MQRankSum=-4.370;QD=13.09;ReadPosRankSum=3.595;VQSLOD=3.6600;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,8:31:0.58:190,0,1	0/1:10,5:15:39.73:288,0,40	0/0:59,0:11:26.68:0,27,386	0/0:80,0:20:47.35:0,47,693	0/0:25,0:25:66.56:0,67,1061	0/1:25,3:28:19.76:448,0,20	1/1:25,16:39:3.90:515,4,0	0/0:34,0:27:62.67:0,63,822	0/1:29,17:44:29.92:706,0,30	0/0:70,0:67:99:0,198,3083	0/0:17,0:17:51.17:0,51,822	0/0:47,0:47:99:0,135,2105	0/1:25,8:32:54.94:645,0,55	1/1:21,11:30:35.74:494,36,0	1/1:26,5:31:30.91:609,31,0	0/0:27,0:27:72.25:0,72,1163	0/0:33,1:33:47.76:0,48,619	0/1:19,4:20:99:246,0,161	0/0:21,0:12:33.06:0,33,468	0/0:20,0:20:36.01:0,36,471	0/0:80,0:68:54.99:0,55,771	0/1:15,7:22:21.24:143,0,21	1/1:17,3:20:11.91:240,12,0	0/1:21,13:34:23.98:163,0,24	0/1:21,7:28:27.46:393,0,27	0/0:48,0:45:99:0,126,1935	0/0:12,0:12:23.53:0,24,321	0/0:11,0:11:33.11:0,33,527
chr10	103041050	.	ATG	A	2261.30	PASS	AB=0.904;AC=26;AF=0.464;AN=56;BaseQRankSum=15.877;DP=966;FS=0.357;HRun=0;HaplotypeScore=294.2908;InbreedingCoeff=0.4055;MQ=44.04;MQ0=37;MQRankSum=-5.789;QD=4.69;ReadPosRankSum=1.781;VQSLOD=2.4995;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,1:31:25.63:29,0,26	1/1:10,4:14:19.17:155,19,0	0/0:62,0:12:29.61:0,30,274	0/0:82,1:22:50.65:0,51,723	0/0:25,0:25:69.18:0,69,1226	0/1:22,5:27:9.94:154,0,10	1/1:34,7:39:4.26:183,4,0	0/1:31,2:26:17.32:17,0,746	1/1:40,4:42:46.80:353,47,0	0/0:70,0:67:99:0,199,3632	0/0:17,0:17:51.17:0,51,988	0/0:47,0:47:99:0,134,2483	1/1:27,5:31:37.29:321,37,0	1/1:29,4:31:40.87:276,41,0	0/1:25,5:30:0.90:118,0,1	0/0:27,0:27:81.28:0,81,1542	0/1:32,2:33:36.33:36,0,346	1/1:20,4:21:29.09:272,29,0	0/1:19,2:12:55.94:56,0,350	0/0:15,3:18:26.91:0,27,313	0/0:68,8:64:9.95:0,10,632	0/1:17,4:21:12.83:82,0,13	1/1:16,4:20:5.84:100,6,0	1/1:29,6:34:3.40:123,3,0	1/1:23,4:27:16.59:169,17,0	0/0:47,0:44:99:0,111,2234	0/1:11,1:12:13.80:14,0,193	0/0:11,0:11:33.11:0,33,622
chr10	103041052	.	G	GCACA	7696.86	PASS	AB=0.882;AC=36;AF=0.643;AN=56;BaseQRankSum=13.107;DP=981;FS=0.357;HRun=0;HaplotypeScore=309.7169;InbreedingCoeff=0.7978;MQ=43.67;MQ0=39;MQRankSum=-6.985;QD=13.18;ReadPosRankSum=-2.506;VQSLOD=3.0752;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:30:17.10:202,17,0	1/1:14,0:14:18.42:286,18,0	0/0:63,0:12:17.73:0,18,226	0/0:85,0:21:52.02:0,52,750	0/0:25,0:25:60.44:0,60,1071	1/1:28,0:28:36.85:515,37,0	1/1:41,2:41:36.48:664,36,0	0/1:27,4:24:99:294,0,173	1/1:44,0:42:56.57:837,57,0	0/0:72,0:69:99:0,183,3112	0/0:17,0:17:42.13:0,42,705	0/0:47,0:47:99:0,126,2180	1/1:32,0:31:39.57:693,40,0	1/1:34,0:32:44.79:630,45,0	1/1:29,0:29:36.09:591,36,0	0/0:28,0:28:72.23:0,72,1236	1/1:31,3:33:31.01:447,31,0	1/1:25,0:22:33.02:367,33,0	1/1:22,0:12:13.08:175,13,0	1/1:18,0:18:18.05:308,18,0	0/1:69,10:68:22.57:445,0,23	1/1:23,0:23:7.06:146,7,0	1/1:20,0:20:17.64:281,18,0	1/1:36,0:35:11.26:237,11,0	1/1:27,0:27:31.61:414,32,0	0/0:48,0:45:99:0,123,2129	1/1:8,3:11:4.28:165,4,0	0/0:11,0:11:30.10:0,30,533
chr10	103041054	.	ACACACATG	A	8204.79	PASS	AB=0.925;AC=35;AF=0.625;AN=56;BaseQRankSum=15.389;DP=988;FS=5.371;HRun=0;HaplotypeScore=344.6317;InbreedingCoeff=0.7764;MQ=43.42;MQ0=39;MQRankSum=-6.423;QD=14.07;ReadPosRankSum=-3.045;VQSLOD=2.5115;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,8:31:15.13:271,15,0	1/1:11,3:14:20.85:267,21,0	0/0:64,0:13:21.07:0,21,441	0/0:85,0:20:51.30:0,51,1308	0/0:25,0:25:66.68:0,67,2310	1/1:18,11:29:41.43:805,41,0	1/1:39,4:41:21.37:134,21,0	0/1:31,0:24:99:164,0,280	1/1:29,13:41:55.07:1098,55,0	0/0:73,0:70:99:0,193,6674	0/0:18,0:18:45.14:0,45,1501	0/0:49,0:49:99:0,132,4743	1/1:24,10:34:52.13:1030,52,0	1/1:24,10:32:37.87:630,38,0	1/1:16,12:28:32.91:646,33,0	0/0:28,0:28:75.24:0,75,2762	1/1:29,5:33:29.57:483,30,0	0/1:20,4:21:18.10:386,0,18	1/1:22,1:13:19.09:279,19,0	1/1:13,6:19:20.24:274,20,0	0/1:71,7:67:0.98:420,0,1	1/1:18,4:22:11.40:100,11,0	1/1:13,7:20:14.08:221,14,0	1/1:26,10:35:9.10:95,9,0	1/1:14,12:26:10.58:570,11,0	0/0:49,0:46:99:0,129,4776	1/1:8,3:11:17.85:331,18,0	0/0:11,0:11:30.10:0,30,1162
chr10	103041060	.	ATG	A	3931.57	PASS	AB=0.964;AC=21;AF=0.375;AN=56;BaseQRankSum=13.083;DP=961;FS=8.757;HRun=0;HaplotypeScore=290.0212;InbreedingCoeff=-0.3182;MQ=41.08;MQ0=48;MQRankSum=-6.796;QD=7.15;ReadPosRankSum=0.665;VQSLOD=2.0182;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,1:28:2.35:154,2,0	0/1:14,0:14:30.90:87,0,31	0/0:68,1:8:19.76:0,20,231	0/0:94,2:21:45.41:0,45,765	0/0:24,0:24:66.12:0,66,1220	0/1:25,0:25:99:386,0,116	0/1:41,1:40:99:120,0,170	0/1:26,2:21:39.43:39,0,445	1/1:41,0:40:11.13:559,11,0	0/0:69,0:66:99:0,196,3773	0/0:17,0:17:48.15:0,48,861	0/0:50,0:50:99:0,141,2665	0/1:31,1:32:99:373,0,105	0/1:34,0:32:99:233,0,104	0/1:27,0:27:7.47:361,0,7	0/0:26,0:26:78.25:0,78,1503	0/1:31,2:32:33.81:325,0,34	0/1:18,4:21:41.26:216,0,41	0/1:22,1:12:99:104,0,125	0/1:16,0:16:55.55:182,0,56	0/1:70,2:61:99:280,0,205	0/1:20,1:21:31.25:31,0,79	0/1:16,1:17:24.16:64,0,24	0/1:34,0:33:27.89:28,0,52	0/1:26,1:27:11.90:232,0,12	0/0:48,0:45:99:0,132,2575	0/1:12,1:13:72.19:157,0,72	0/0:10,0:10:30.10:0,30,587
chr10	103041072	.	A	AT	3629.19	PASS	AB=0.862;AC=33;AF=0.589;AN=56;BaseQRankSum=14.525;DP=978;FS=16.636;HRun=0;HaplotypeScore=280.4763;InbreedingCoeff=0.5759;MQ=44.07;MQ0=60;MQRankSum=-10.918;QD=6.68;ReadPosRankSum=0.420;VQSLOD=2.2335;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,11:29:18.33:236,18,0	0/1:12,2:14:16.04:43,0,16	0/0:85,0:6:15.05:0,15,210	0/0:106,0:30:62.26:0,62,729	0/0:29,0:29:72.17:0,72,1001	1/1:10,11:21:26.68:313,27,0	1/1:32,6:38:10.14:113,10,0	0/1:29,0:23:99:158,0,100	1/1:22,14:34:15.52:436,16,0	0/0:63,0:59:99:0,165,2169	0/0:14,0:14:42.14:0,42,587	0/0:52,0:52:99:0,150,2075	1/1:22,11:33:36.93:366,37,0	1/1:17,15:32:20.63:295,21,0	1/1:16,12:28:24.73:273,25,0	0/0:26,0:26:78.18:0,78,1065	1/1:24,5:31:0.05:175,0,0	1/1:16,6:21:23.69:251,24,0	1/1:17,3:12:12.94:132,13,0	1/1:10,6:15:7.50:79,8,0	0/1:62,12:61:14.65:286,0,15	0/1:18,4:24:5.20:5,0,15	1/1:8,7:16:7.07:75,7,0	0/1:18,12:30:12.44:68,0,12	1/1:13,12:26:23.06:266,23,0	0/0:50,0:47:99:0,132,1740	1/1:12,2:14:7.67:59,8,0	0/0:10,0:10:30.10:0,30,415
chr10	103041073	.	C	CATG	11842.42	PASS	AB=0.659;AC=37;AF=0.661;AN=56;BaseQRankSum=6.958;DP=953;FS=28.723;HRun=0;HaplotypeScore=244.7135;InbreedingCoeff=0.8554;MQ=44.55;MQ0=62;MQRankSum=-7.304;QD=22.73;ReadPosRankSum=-0.761;VQSLOD=3.3395;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,5:27:21.06:455,21,0	1/1:3,6:10:18.03:364,18,0	0/0:86,0:6:15.04:0,15,279	0/0:103,0:28:61.66:0,62,876	0/0:27,0:27:72.21:0,72,1327	1/1:12,9:21:39.13:875,39,0	1/1:11,23:34:17.56:343,18,0	0/1:14,13:23:99:902,0,192	1/1:20,11:31:50.49:1076,50,0	0/0:62,0:58:99:0,163,2928	0/0:14,0:14:42.14:0,42,778	0/0:52,0:52:99:0,153,2767	1/1:12,18:32:56.25:1231,56,0	1/1:21,9:29:39.01:852,39,0	1/1:13,14:27:27.06:616,27,0	0/0:26,0:26:78.23:0,78,1417	1/1:8,17:25:2.19:750,2,0	1/1:10,10:19:32.07:874,32,0	1/1:12,10:12:30.10:704,30,0	1/1:8,8:15:12.04:228,12,0	1/1:43,26:61:8.91:760,9,0	1/1:9,16:26:14.34:320,14,0	1/1:11,7:18:8.82:200,9,0	1/1:15,12:29:17.69:373,18,0	1/1:14,11:26:30.38:649,30,0	0/0:49,0:46:99:0,129,2386	1/1:2,8:11:12.26:269,12,0	0/0:10,0:10:30.10:0,30,555
chr10	103041155	.	ACACG	A	11192.83	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=-5.637;DP=936;FS=12.244;HRun=0;HaplotypeScore=208.1716;InbreedingCoeff=0.8712;MQ=50.12;MQ0=31;MQRankSum=-1.301;QD=24.87;ReadPosRankSum=-0.137;VQSLOD=3.6732;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,16:46:73.25:1108,73,0	1/1:6,3:9:23.72:322,24,0	0/0:28,0:3:8.22:0,8,38	0/1:40,0:8:0.34:0,0,23	0/0:17,0:17:30.06:0,30,516	1/1:15,6:21:45.34:626,45,0	1/1:25,10:35:53.90:778,54,0	0/0:28,0:22:23.29:0,23,251	1/1:22,16:37:90.27:1494,90,0	0/0:35,0:34:97.33:0,97,1687	0/0:12,0:12:27.92:0,28,602	0/0:52,0:51:99:0,121,2371	1/1:21,3:24:50.16:612,50,0	1/1:28,27:52:99:1698,99,0	0/0:32,0:31:67.98:0,68,487	0/0:24,0:24:56.52:0,57,1124	0/1:39,0:36:35.07:35,0,37	1/1:17,16:30:86.23:1339,86,0	0/0:27,0:16:20.59:0,21,145	0/0:17,0:14:33.85:0,34,238	0/0:153,0:139:99:0,236,1583	1/1:11,8:19:36.10:580,36,0	1/1:6,5:11:10.03:234,10,0	1/1:32,21:50:99:1530,105,0	1/1:13,12:24:54.13:835,54,0	0/0:32,0:26:70:0,70,1318	0/0:23,0:23:48.71:0,49,316	0/0:5,0:5:15.03:0,15,281
chr10	103041159	.	GCACGCA	G	846.20	PASS	AB=0.983;AC=16;AF=0.286;AN=56;BaseQRankSum=12.490;DP=925;FS=1.033;HRun=0;HaplotypeScore=265.0571;InbreedingCoeff=0.0913;MQ=50.16;MQ0=31;MQRankSum=-0.729;QD=2.22;ReadPosRankSum=3.377;VQSLOD=2.1915;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:45,0:44:3.16:112,0,3	0/1:8,0:8:17.38:24,0,17	0/0:27,0:4:11.63:0,12,193	0/0:43,0:7:7.94:0,8,52	0/0:15,0:15:33.08:0,33,820	0/1:20,1:21:15.12:15,0,129	0/1:33,1:34:12.61:148,0,13	0/0:25,0:20:5.68:0,6,261	1/1:34,1:35:10.02:98,10,0	0/0:37,0:35:75.98:0,76,2476	0/0:13,0:13:32.64:0,33,810	0/0:50,0:49:99:0,128,3259	0/1:24,0:25:62.45:62,0,116	0/1:49,3:49:18.58:73,0,19	0/0:32,0:31:53.89:0,54,817	0/0:25,0:25:63.17:0,63,1701	0/0:39,0:36:21.49:0,21,660	0/1:34,0:30:74.60:148,0,75	0/0:22,0:11:3.16:0,3,203	0/1:17,0:14:3.47:3,0,304	0/0:155,1:143:99:0,129,2511	1/1:19,0:19:4.38:97,4,0	1/1:11,0:11:8.03:75,8,0	0/1:54,0:51:94.31:94,0,138	0/1:26,0:25:47.21:58,0,47	0/0:32,0:26:73.12:0,73,1959	0/0:22,0:22:47.58:0,48,476	0/0:5,0:5:15.03:0,15,422
chr10	103041161	.	ACG	A	6586.91	PASS	AB=0.974;AC=30;AF=0.536;AN=56;BaseQRankSum=14.073;DP=940;FS=5.130;HRun=0;HaplotypeScore=192.6000;InbreedingCoeff=0.2779;MQ=50.24;MQ0=31;MQRankSum=1.295;QD=8.96;ReadPosRankSum=9.072;VQSLOD=3.2359;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:45,1:46:17.32:330,0,17	1/1:8,0:8:11.19:113,11,0	0/0:28,0:4:11.63:0,12,157	0/1:41,0:7:6.93:7,0,19	0/0:14,0:14:33.08:0,33,532	0/1:21,0:21:54.51:139,0,55	1/1:33,0:33:26.19:245,26,0	0/1:24,1:20:83.82:84,0,105	1/1:35,0:34:70.17:434,70,0	0/0:38,0:36:35.80:0,36,1483	0/0:12,0:12:32.99:0,33,476	0/0:51,0:50:99:0,131,2081	0/1:24,2:26:93.35:148,0,93	1/1:51,1:49:44.27:522,44,0	1/1:32,0:31:46.23:325,46,0	0/0:25,0:25:23.55:0,24,960	1/1:17,21:36:98.96:1352,99,0	0/1:34,0:31:11.63:300,0,12	0/1:21,0:10:8.36:76,0,8	1/1:17,0:15:3.38:153,3,0	1/1:162,0:148:99:1311,171,0	1/1:19,0:19:26.18:205,26,0	0/1:12,0:12:28.50:52,0,29	0/1:55,3:55:80.84:351,0,81	0/1:28,0:27:11.91:190,0,12	0/0:32,0:26:75.78:0,76,1237	1/1:22,0:22:15.62:250,16,0	0/0:5,0:5:15.03:0,15,233
chr10	103041163	.	GCA	G	6956.81	PASS	AB=0.986;AC=29;AF=0.518;AN=56;BaseQRankSum=11.132;DP=935;FS=6.736;HRun=0;HaplotypeScore=191.1155;InbreedingCoeff=0.0683;MQ=49.64;MQ0=30;MQRankSum=1.753;QD=9.25;ReadPosRankSum=9.111;VQSLOD=3.2170;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:46,0:45:70.70:71,0,106	0/1:8,0:8:6.86:24,0,7	0/0:26,0:4:9.03:0,9,139	0/0:40,0:3:0:0,0,0	0/0:13,0:13:30.07:0,30,424	0/1:21,0:21:29.02:29,0,138	0/1:35,0:35:55.41:59,0,55	1/1:24,2:19:22.31:290,22,0	1/1:34,2:35:17.14:145,17,0	0/1:36,3:37:14.12:14,0,1230	0/0:11,0:11:29.64:0,30,387	0/0:52,1:52:99:0,128,1818	0/1:26,0:26:5.88:6,0,225	0/1:53,0:50:10.83:153,0,11	1/1:12,18:29:69.09:837,69,0	0/1:21,2:23:44.80:45,0,798	1/1:38,0:35:75.18:590,75,0	0/1:35,0:32:99:130,0,109	1/1:13,7:9:15.05:189,15,0	1/1:8,9:15:36.10:437,36,0	1/1:68,90:144:99:3139,235,0	0/1:20,0:20:12.10:70,0,12	0/1:12,0:12:31.62:32,0,53	0/1:58,0:56:81.78:82,0,290	0/1:28,1:28:50.82:51,0,127	0/0:33,0:27:66.64:0,67,1029	1/1:8,14:22:45.61:563,46,0	0/0:7,0:7:18.01:0,18,230
chr10	103041243	.	CGCACAT	C	56.92	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.796;DP=1102;FS=5.096;HRun=0;HaplotypeScore=299.9317;InbreedingCoeff=0.9316;MQ=52.53;MQ0=21;MQRankSum=-3.104;QD=2.85;ReadPosRankSum=-1.539;VQSLOD=1.8011;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:92.84:0,93,2834	0/0:15,0:15:39.13:0,39,1100	0/0:64,0:11:26.75:0,27,683	0/0:61,0:10:21.07:0,21,581	0/0:30,0:30:81.28:0,81,2670	0/0:22,0:22:38.81:0,39,1089	0/0:45,0:45:99:0,102,3106	0/0:30,0:30:75.22:0,75,2147	0/0:33,0:31:60.01:0,60,1791	0/0:71,0:71:99:0,211,6548	0/0:23,0:22:66.23:0,66,2153	0/0:52,0:51:99:0,147,4665	0/0:35,0:34:75.05:0,75,2091	0/0:36,0:35:59.29:0,59,1693	1/1:5,15:18:9.03:140,9,0	0/0:27,0:27:81.28:0,81,2681	0/0:39,0:37:99:0,99,3099	0/0:31,0:31:89.97:0,90,2446	0/0:24,0:16:24.08:0,24,770	0/0:14,0:14:32.84:0,33,900	0/0:132,0:131:99:0,283,8874	0/0:34,0:34:63.35:0,63,1707	0/0:20,0:20:45.15:0,45,1426	0/0:73,0:72:99:0,155,4593	0/0:38,0:36:69.24:0,69,2312	0/0:44,0:44:99:0,112,3920	0/0:20,0:20:41.65:0,42,1367	0/0:19,0:19:54.16:0,54,1588
chr10	103041276	.	G	GCA	17088.73	PASS	AB=0.810;AC=35;AF=0.625;AN=56;BaseQRankSum=15.382;DP=965;FS=9.156;HRun=0;HaplotypeScore=190.3626;InbreedingCoeff=0.8810;MQ=56.18;MQ0=14;MQRankSum=1.766;QD=29.21;ReadPosRankSum=4.615;VQSLOD=5.8999;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,33:42:36.79:1278,37,0	1/1:2,10:12:2.20:329,2,0	0/0:44,0:21:57.16:0,57,730	0/0:45,0:30:70.82:0,71,999	0/0:26,0:26:72.21:0,72,954	1/1:5,11:16:26.81:425,27,0	1/1:7,33:40:59.81:1257,60,0	1/1:10,13:21:28.81:719,29,0	1/1:9,28:36:78.01:1174,78,0	0/0:76,0:75:99:0,204,2679	0/0:21,0:21:60.18:0,60,795	0/0:49,0:49:99:0,138,1866	1/1:14,20:33:61.34:911,61,0	1/1:3,30:35:60.68:1002,61,0	0/0:29,0:28:44.72:0,45,341	0/0:29,0:29:75.58:0,76,1072	1/1:13,23:34:78.27:1291,78,0	1/1:9,23:32:44.82:1114,45,0	0/1:13,4:15:36.43:159,0,36	1/1:1,13:14:24.08:402,24,0	1/1:38,77:113:99:3481,201,0	1/1:5,23:28:6.62:438,7,0	1/1:6,15:21:33.56:520,34,0	1/1:8,42:49:68.90:1434,69,0	1/1:0,24:23:51.17:853,51,0	0/0:42,0:42:99:0,108,1431	1/1:2,7:9:18.06:301,18,0	0/0:18,0:18:51.14:0,51,658
chr10	103042046	.	CTTTCTTTTTT	C	396.11	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=-2.444;DP=562;FS=13.869;HRun=0;HaplotypeScore=209.4886;InbreedingCoeff=0.2388;MQ=57.14;MQ0=17;MQRankSum=-4.657;QD=4.21;ReadPosRankSum=-3.559;VQSLOD=1.0182;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:23:19.24:0,19,1529	1/1:1,7:8:15.05:451,15,0	0/0:22,0:7:11.98:0,12,181	0/0:13,0:7:5.96:0,6,64	0/0:33,0:32:79.23:0,79,2012	0/0:19,0:18:10.68:0,11,1293	0/0:22,0:22:12.92:0,13,1308	0/0:23,0:23:37.06:0,37,554	0/0:14,0:14:38.70:0,39,927	0/0:19,0:19:55.05:0,55,1701	0/0:14,0:14:35.11:0,35,1019	0/0:19,0:19:45.15:0,45,1463	0/1:16,0:14:6.50:6,0,926	0/1:20,0:17:31.89:32,0,1179	0/0:14,0:13:25.41:0,25,909	0/0:9,0:9:21.05:0,21,691	0/0:27,0:25:71.44:0,71,2350	0/0:33,0:32:31.12:0,31,1993	0/0:29,0:28:63.81:0,64,1767	0/0:21,0:21:51:0,51,1449	0/0:9,0:9:15.31:0,15,199	0/0:23,0:22:51.13:0,51,1367	0/0:22,0:20:10.80:0,11,1098	0/1:22,0:22:4.65:5,0,1187	0/1:28,0:26:21.32:21,0,1747	0/0:19,0:19:51.13:0,51,1413	0/0:20,0:20:33.98:0,34,1104	0/0:17,0:17:30.04:0,30,901
chr10	103042053	.	T	TC	6291.60	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=9.281;DP=563;FS=0.772;HRun=0;HaplotypeScore=109.9376;InbreedingCoeff=0.9480;MQ=57.45;MQ0=17;MQRankSum=4.099;QD=16.34;ReadPosRankSum=7.356;VQSLOD=6.5290;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,19:23:57.47:459,57,0	0/0:7,0:7:13.16:0,13,59	0/0:23,0:8:13.95:0,14,100	0/0:13,0:7:9.70:0,10,60	0/0:33,0:32:80.41:0,80,718	1/1:7,13:19:49.52:391,50,0	1/1:10,11:20:43.40:362,43,0	1/1:4,12:16:34.07:272,34,0	1/1:3,9:12:13.37:252,13,0	0/0:22,0:22:59.78:0,60,696	0/0:15,0:15:36.52:0,37,369	0/0:18,0:18:47.88:0,48,519	1/1:7,9:14:32.50:292,33,0	1/1:10,11:18:44.55:351,45,0	1/1:7,6:12:30.67:255,31,0	0/0:11,0:11:25.45:0,25,258	1/1:11,16:25:48.90:504,49,0	1/1:15,18:32:63.10:557,63,0	1/1:8,0:25:54.70:449,55,0	1/1:4,2:25:43.87:283,44,0	1/1:2,8:10:11.66:106,12,0	1/1:10,13:22:46.29:378,46,0	1/1:12,12:22:27.83:348,28,0	1/1:10,12:22:49.02:369,49,0	1/1:12,18:28:71.34:589,71,0	0/0:23,0:23:64.74:0,65,602	1/1:6,1:20:2.24:76,2,0	0/0:13,0:13:25.60:0,26,297
chr10	103042055	.	T	TTC	615.27	PASS	AB=0.986;AC=11;AF=0.196;AN=56;BaseQRankSum=2.314;DP=556;FS=13.144;HRun=0;HaplotypeScore=135.5147;InbreedingCoeff=0.0438;MQ=58.34;MQ0=16;MQRankSum=-1.176;QD=3.08;ReadPosRankSum=0.021;VQSLOD=1.5480;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,1:23:37.04:37,0,53	0/0:7,0:7:14.69:0,15,87	0/0:24,0:9:17.42:0,17,116	0/1:12,0:6:17.96:18,0,24	0/0:30,0:30:78.58:0,79,780	0/1:20,0:19:14.48:14,0,39	0/1:21,0:20:15.88:16,0,52	0/0:16,0:16:30.54:0,31,241	0/0:12,0:12:13.92:0,14,37	0/0:24,0:24:62.74:0,63,749	0/0:14,0:14:37.10:0,37,375	0/0:18,0:18:47.97:0,48,564	0/1:15,0:13:0.11:0,0,36	0/1:21,0:18:24.01:24,0,63	0/1:13,0:12:4.48:158,0,4	0/0:11,0:11:29.83:0,30,318	1/1:12,16:26:55.24:476,55,0	0/0:33,0:32:27.45:0,27,154	0/0:23,0:22:22.06:0,22,188	0/0:24,1:25:5.73:0,6,104	0/0:10,0:10:9.90:0,10,92	0/1:22,1:22:11.85:12,0,70	0/0:21,0:19:10.20:0,10,69	0/0:21,0:21:9.94:0,10,51	0/0:32,0:30:11.99:0,12,90	0/0:23,0:23:65.66:0,66,634	0/1:20,1:21:3.48:3,0,91	0/0:12,0:12:24.02:0,24,312
chr10	103042056	.	T	TC	1866.27	PASS	AB=0.684;AC=20;AF=0.357;AN=56;BaseQRankSum=9.499;DP=552;FS=3.317;HRun=0;HaplotypeScore=119.4143;InbreedingCoeff=0.6251;MQ=58.46;MQ0=15;MQRankSum=2.721;QD=7.21;ReadPosRankSum=7.089;VQSLOD=3.3135;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,18:25:6.60:209,7,0	0/0:7,0:7:12.41:0,12,49	0/0:23,0:8:20.61:0,21,177	0/0:11,0:6:8.36:0,8,56	0/0:30,0:30:77.78:0,78,738	1/1:6,13:18:23.11:200,23,0	1/1:10,11:20:0.30:156,0,0	0/0:16,0:16:33.11:0,33,211	1/1:2,9:11:21.81:155,22,0	0/0:22,0:22:62.78:0,63,721	0/0:14,0:14:37.34:0,37,353	0/0:18,0:18:47.94:0,48,535	1/1:6,9:13:29.44:157,29,0	0/1:13,9:19:16.21:127,0,16	0/1:7,6:12:22.27:50,0,22	0/0:11,0:11:28.48:0,28,290	0/0:28,0:26:2.21:0,2,106	0/1:17,17:33:0.63:218,0,1	0/0:22,0:22:31.77:0,32,224	0/0:25,0:25:50.94:0,51,273	0/0:10,0:10:14.80:0,15,100	0/1:12,11:22:26.86:128,0,27	1/1:9,12:19:11.33:165,11,0	1/1:8,12:20:31.26:214,31,0	1/1:17,15:30:31.44:283,31,0	0/0:23,0:23:64.54:0,65,618	0/0:21,0:21:28.22:0,28,176	0/0:12,0:12:22.62:0,23,280
chr10	103042059	.	T	TC	43.72	PASS	AB=0.667;AC=1;AF=0.018;AN=56;BaseQRankSum=0.404;DP=543;FS=6.634;HRun=0;HaplotypeScore=124.9559;InbreedingCoeff=0.0362;MQ=58.75;MQ0=15;MQRankSum=2.408;QD=3.64;ReadPosRankSum=0.711;VQSLOD=2.8227;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:26:67.73:0,68,507	0/0:7,0:7:11.50:0,12,60	0/0:24,0:9:6.62:0,7,76	0/0:11,0:6:7.77:0,8,59	0/0:30,0:30:79.78:0,80,724	0/0:18,0:17:44.17:0,44,334	0/0:20,0:19:49.26:0,49,361	0/0:16,0:16:35.92:0,36,229	0/0:10,0:10:30:0,30,261	0/0:22,0:22:63.57:0,64,726	0/0:12,0:12:31.71:0,32,301	0/0:18,0:18:47.93:0,48,520	0/0:16,0:14:38.60:0,39,303	0/0:21,0:18:49.28:0,49,383	0/1:6,6:11:13.30:118,0,13	0/0:11,0:11:28.47:0,28,291	0/0:28,0:27:68.43:0,68,577	0/0:34,0:33:81.83:0,82,577	0/0:19,0:19:52.46:0,52,384	0/0:24,0:24:52.92:0,53,400	0/0:10,0:10:17.73:0,18,118	0/0:22,0:21:53.33:0,53,417	0/0:23,0:21:47.52:0,48,376	0/0:22,0:22:50.53:0,51,411	0/0:32,0:30:71.15:0,71,575	0/0:21,0:21:61.97:0,62,587	0/0:19,0:19:36.21:0,36,284	0/0:12,0:12:22.62:0,23,280
chr10	103043415	.	C	CG	25187.94	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-18.967;DP=825;FS=3.130;HRun=0;HaplotypeScore=74.3665;InbreedingCoeff=0.9998;MQ=90.63;MQ0=0;MQRankSum=-6.585;QD=43.88;ReadPosRankSum=3.318;VQSLOD=5.4124;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:44:99:1911,120,0	1/1:1,14:15:45.15:710,45,0	0/0:24,0:24:54.97:0,55,795	0/0:39,0:39:99:0,104,1175	0/0:27,0:27:81.27:0,81,1129	1/1:0,17:17:51.17:814,51,0	1/1:2,40:42:99:1719,108,0	1/1:0,31:30:93.27:1411,93,0	1/1:0,28:28:84.29:1339,84,0	0/0:31,0:31:93.29:0,93,1258	0/0:20,0:20:60.20:0,60,839	0/0:31,0:31:93.31:0,93,1299	1/1:0,30:30:87.30:1387,87,0	1/1:0,22:22:66.23:1053,66,0	1/1:0,40:40:99:1820,114,0	0/0:33,0:33:96.31:0,96,1326	1/1:1,33:34:93.32:1483,93,0	1/1:0,32:32:90.31:1436,90,0	1/1:2,22:24:66.21:1028,66,0	1/1:0,32:32:90.31:1436,90,0	1/1:0,50:50:99:2150,135,0	1/1:1,36:37:99:1628,102,0	1/1:0,19:19:57.19:909,57,0	1/1:1,39:40:96.33:1532,96,0	1/1:0,20:20:45.15:718,45,0	0/0:37,0:37:99:0,108,1453	1/1:0,17:17:45.15:706,45,0	0/0:9,0:9:27.09:0,27,377
chr10	103045868	.	GAC	G	443.50	PASS	AB=0.985;AC=10;AF=0.192;AN=52;BaseQRankSum=5.799;DP=967;FS=7.304;HRun=0;HaplotypeScore=239.5537;InbreedingCoeff=-0.0596;MQ=53.84;MQ0=20;MQRankSum=-0.529;QD=1.28;ReadPosRankSum=-5.363;VQSLOD=0.0123;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:47,0:47:46.28:59,0,46	0/0:12,0:12:2.92:0,3,17	0/1:62,1:14:21.82:22,0,123	0/0:63,0:23:28.55:0,29,314	0/0:43,0:43:99:0,104,1572	0/0:27,0:27:4.78:0,5,18	./.	0/1:61,0:61:14.03:14,0,252	0/1:29,0:29:41.22:41,0,72	0/0:52,0:52:99:0,111,2152	0/1:16,1:17:23.87:24,0,603	0/0:36,0:35:83.80:0,84,1215	0/0:28,0:28:16.27:0,16,72	0/0:23,0:23:2.91:0,3,18	0/0:33,0:33:1.79:0,2,5	0/0:28,0:28:65.23:0,65,1002	0/1:37,1:38:35.38:112,0,35	0/1:25,0:25:71.39:109,0,71	0/0:28,0:26:19.75:0,20,182	0/0:26,0:26:6.21:0,6,39	0/0:58,0:54:12:0,12,79	1/1:31,0:31:8.69:93,9,0	./.	0/1:35,1:36:24.28:107,0,24	0/0:33,0:33:1.55:0,2,4	0/0:45,0:45:99:0,107,1582	0/0:21,0:21:29.57:0,30,220	0/0:16,1:17:5.27:0,5,563
chr10	103045870	.	C	CACACACACAG	10083.13	PASS	AB=0.690;AC=35;AF=0.625;AN=56;BaseQRankSum=3.866;DP=997;FS=20.577;HRun=0;HaplotypeScore=301.7727;InbreedingCoeff=0.7247;MQ=52.89;MQ0=22;MQRankSum=-7.228;QD=15.30;ReadPosRankSum=-5.316;VQSLOD=1.9469;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:40,8:48:9.88:531,10,0	1/1:4,7:13:2.93:77,3,0	0/1:61,0:12:20.66:21,0,208	0/0:63,0:22:18.57:0,19,389	0/0:41,0:41:99:0,108,2825	1/1:3,24:29:2.37:154,2,0	0/1:7,21:32:0.11:0,0,0	1/1:62,0:62:99:2151,130,0	1/1:26,4:30:29.99:698,30,0	0/0:51,0:51:99:0,138,3841	0/0:17,0:17:51.16:0,51,1290	0/0:35,0:34:85.79:0,86,2216	1/1:0,25:29:11.81:481,12,0	1/1:3,20:27:2.84:74,3,0	0/0:7,28:38:0.72:0,1,2	0/0:30,0:30:26.37:0,26,1851	1/1:38,2:40:59.81:1174,60,0	1/1:21,5:25:15.89:1183,16,0	1/1:29,0:27:59.77:1106,60,0	1/1:23,1:24:15.78:164,16,0	1/1:60,0:56:28.85:431,29,0	1/1:25,7:32:22.24:415,22,0	0/1:2,18:21:0.01:0,0,1	1/1:36,1:37:30.50:640,31,0	1/1:6,26:36:2.64:71,3,0	0/0:46,0:46:99:0,105,2688	1/1:21,0:21:26.69:714,27,0	0/0:17,0:17:45.06:0,45,1033
chr10	103045872	.	C	CACACACAG	9835.01	PASS	AB=0.977;AC=29;AF=0.518;AN=56;BaseQRankSum=-0.937;DP=1013;FS=29.499;HRun=0;HaplotypeScore=289.8912;InbreedingCoeff=0.4882;MQ=50.73;MQ0=25;MQRankSum=-6.297;QD=16.23;ReadPosRankSum=-3.557;VQSLOD=2.6437;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:47,1:48:31.96:237,0,32	1/1:12,0:12:3.01:39,3,0	0/0:64,0:10:3.89:0,4,207	0/0:63,0:20:23.89:0,24,428	0/0:42,0:42:99:0,111,2590	1/1:28,0:28:3.01:105,3,0	0/1:29,1:30:0.10:0,0,0	1/1:60,0:60:99:3070,143,0	1/1:29,0:29:5.71:354,6,0	0/0:52,0:52:99:0,147,3533	0/0:17,0:17:51.16:0,51,1180	0/0:36,0:35:82.48:0,82,2029	1/1:28,0:28:11.27:285,11,0	0/1:30,0:29:26.01:26,0,42	0/0:38,0:38:4.51:0,5,28	0/0:30,0:30:58.55:0,59,1664	1/1:43,0:43:57.34:814,57,0	0/1:27,1:27:14.38:711,0,14	1/1:7,22:34:83.35:1855,83,0	1/1:15,9:24:16.93:224,17,0	1/1:57,4:57:44.35:547,44,0	0/1:33,1:34:23.52:214,0,24	0/1:20,1:21:0.21:0,0,0	1/1:38,0:38:23.62:310,24,0	0/1:33,0:33:20.08:27,0,20	0/0:46,0:46:99:0,123,2687	1/1:3,19:23:26.66:1016,27,0	0/0:18,0:18:45.10:0,45,969
chr10	103045879	.	A	AGACACACA	9518.07	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=-0.790;DP=951;FS=28.052;HRun=0;HaplotypeScore=284.3149;InbreedingCoeff=0.5464;MQ=49.52;MQ0=23;MQRankSum=-6.638;QD=16.91;ReadPosRankSum=-4.591;VQSLOD=2.2827;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:43:31.86:237,0,32	1/1:10,0:10:3.01:39,3,0	0/0:61,0:8:3.89:0,4,207	0/0:54,0:18:23.89:0,24,428	0/0:44,0:44:99:0,111,2590	1/1:24,0:24:2.82:105,3,0	0/1:26,0:26:0.10:0,0,0	1/1:19,31:63:99:2979,129,0	1/1:29,0:29:5.71:354,6,0	0/0:54,0:54:99:0,150,3614	0/0:19,0:19:51.16:0,51,1180	0/0:34,0:34:82.48:0,82,2029	1/1:26,0:26:11.27:285,11,0	0/1:30,0:29:26.01:26,0,42	0/0:32,0:32:4.51:0,5,28	0/0:27,0:27:50.32:0,50,1656	1/1:35,0:35:39.23:787,39,0	1/1:24,0:23:8.80:720,9,0	1/1:31,0:31:53.83:1689,54,0	1/1:23,0:23:16.54:224,17,0	1/1:58,0:55:38.36:505,38,0	0/1:34,0:34:23.52:214,0,24	0/1:22,0:22:0.27:0,0,0	1/1:36,0:36:23.62:310,24,0	0/1:28,0:28:20.08:27,0,20	0/0:46,0:46:99:0,123,2687	1/1:21,0:21:26.66:1016,27,0	0/0:17,0:17:45.10:0,45,969
chr10	103046046	.	GACAC	G	9342.38	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=11.041;DP=1096;FS=54.102;HRun=0;HaplotypeScore=257.7959;InbreedingCoeff=0.9952;MQ=56.58;MQ0=16;MQRankSum=2.820;QD=22.35;ReadPosRankSum=4.018;VQSLOD=2.4848;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,29:51:68.90:1077,69,0	1/1:2,10:12:18.02:322,18,0	0/0:50,0:15:22.24:0,22,538	0/0:88,0:38:81.41:0,81,1507	0/0:26,0:26:75.26:0,75,1828	1/1:7,16:23:32.98:521,33,0	1/1:5,28:34:40.79:696,41,0	0/0:65,0:65:99:0,181,4263	1/1:0,30:30:29.97:504,30,0	0/0:55,0:55:99:0,150,3473	0/0:21,0:21:54.17:0,54,1286	0/0:47,0:47:99:0,129,3056	1/1:1,23:23:21.44:344,21,0	1/1:4,41:45:53.91:981,54,0	0/0:33,0:33:77.47:0,77,1967	0/0:39,0:39:50.73:0,51,2409	1/1:13,26:42:91.47:1574,91,0	1/1:6,15:22:30.07:761,30,0	0/0:24,0:23:63.14:0,63,1399	0/0:22,0:22:59.94:0,60,1471	0/0:107,0:108:99:0,231,5647	1/1:7,31:37:24.03:412,24,0	1/1:5,14:18:15.05:273,15,0	1/1:18,30:50:75.20:1242,75,0	1/1:4,24:28:28.16:635,28,0	0/0:54,0:54:99:0,154,3831	0/0:31,0:31:75.26:0,75,1803	0/0:14,0:14:33.11:0,33,863
chr10	103046052	.	CACA	C	1799.79	PASS	AB=0.993;AC=20;AF=0.357;AN=56;BaseQRankSum=17.466;DP=1053;FS=54.331;HRun=0;HaplotypeScore=258.2948;InbreedingCoeff=0.5125;MQ=56.14;MQ0=13;MQRankSum=3.224;QD=4.54;ReadPosRankSum=7.713;VQSLOD=0.7348;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:48,1:49:22.68:205,0,23	1/1:11,0:11:15.93:86,16,0	0/0:44,0:13:37.04:0,37,681	0/0:88,0:44:99:0,104,2114	0/0:28,0:28:84.29:0,84,1969	1/1:16,0:16:6.21:111,6,0	0/1:32,0:32:0.36:151,0,0	0/0:64,0:64:99:0,193,4510	0/1:32,0:32:65.54:103,0,66	0/0:54,0:54:99:0,154,3645	0/0:19,0:19:54.06:0,54,1298	0/0:48,0:48:99:0,135,3212	0/1:26,0:25:52.92:70,0,53	0/1:43,1:44:17.80:221,0,18	0/0:32,0:32:78.19:0,78,1890	0/0:37,0:37:89.67:0,90,2460	1/1:43,0:43:11.98:317,12,0	0/1:22,0:22:82.13:148,0,82	0/0:24,0:24:69.22:0,69,1551	0/0:22,0:22:60.88:0,61,1419	0/0:101,0:104:99:0,242,5691	1/1:35,0:34:17.79:103,18,0	1/1:15,2:16:14.49:78,14,0	1/1:43,0:43:12.97:255,13,0	1/1:26,0:26:2.51:143,3,0	0/0:53,0:53:99:0,157,3795	0/0:29,0:29:74.83:0,75,1816	0/0:11,0:11:33.11:0,33,813
chr10	103046159	.	GAGACACACAC	G	5798.38	PASS	AB=0.873;AC=23;AF=0.411;AN=56;BaseQRankSum=8.160;DP=1026;FS=4.624;HRun=0;HaplotypeScore=389.6117;InbreedingCoeff=0.7373;MQ=53.24;MQ0=10;MQRankSum=-7.245;QD=19.20;ReadPosRankSum=-2.193;VQSLOD=2.0581;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,4:31:9.19:152,0,9	1/1:5,3:8:11.89:278,12,0	0/0:55,0:19:28.12:0,28,477	0/0:97,0:35:46.36:0,46,914	0/0:32,0:32:87.30:0,87,3618	1/1:10,13:23:20.49:468,20,0	1/1:22,8:28:6.87:922,7,0	0/0:51,0:49:99:0,108,1579	1/1:14,8:22:11.77:301,12,0	0/0:60,0:60:99:0,166,6368	0/0:21,0:21:57.17:0,57,2112	0/0:59,0:59:99:0,147,5780	1/1:11,13:24:41.96:989,42,0	1/1:15,18:33:22.34:701,22,0	0/0:39,0:39:90.13:0,90,3771	0/0:46,0:46:66.68:0,67,4337	0/1:20,3:23:21.39:614,0,21	0/1:14,3:17:84.23:301,0,84	0/0:30,0:23:42.12:0,42,982	0/0:31,0:31:46.45:0,46,1266	0/0:117,0:112:99:0,135,4205	1/1:11,10:21:21.14:487,21,0	1/1:8,5:13:6.46:50,6,0	1/1:29,5:34:10.78:277,11,0	1/1:11,12:23:11.23:259,11,0	0/0:42,0:42:99:0,114,4504	0/0:19,0:19:39.13:0,39,1344	0/0:23,0:23:57.20:0,57,2617
chr10	103046168	.	A	ACACT	3152.09	PASS	AB=0.900;AC=18;AF=0.321;AN=56;BaseQRankSum=7.834;DP=1008;FS=7.202;HRun=0;HaplotypeScore=326.2841;InbreedingCoeff=0.3569;MQ=50.97;MQ0=16;MQRankSum=-5.773;QD=10.33;ReadPosRankSum=-3.355;VQSLOD=0.8879;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,3:29:2.32:147,2,0	0/1:9,1:11:6.86:126,0,7	0/0:57,0:14:28.35:0,28,387	0/0:87,0:27:51.35:0,51,709	0/0:31,0:31:87.30:0,87,1671	0/1:21,3:24:19.29:254,0,19	1/1:27,1:27:22.86:527,23,0	0/0:44,0:43:99:0,104,1786	0/1:17,3:20:6.15:192,0,6	0/0:65,0:64:99:0,175,3253	0/0:21,0:21:63.17:0,63,1087	0/0:60,0:60:99:0,156,2878	0/1:25,2:27:13.07:497,0,13	1/1:28,1:29:12.87:247,13,0	0/0:40,0:40:95.78:0,96,1790	0/0:46,0:46:75.67:0,76,2202	0/1:20,4:24:84.87:391,0,85	0/1:18,1:19:76.72:145,0,77	0/0:25,0:17:45.10:0,45,785	0/0:28,0:27:50.63:0,51,904	0/0:113,0:106:99:0,145,2528	0/1:19,1:20:2.51:327,0,3	1/1:13,0:13:4.23:45,4,0	0/1:35,4:39:9.20:254,0,9	1/1:20,1:21:10.97:178,11,0	0/0:43,0:43:99:0,121,2251	0/0:19,0:19:42.10:0,42,719	0/0:22,0:22:60.19:0,60,1126
chr10	103046185	.	GAC	G	3693.55	PASS	AB=0.691;AC=24;AF=0.429;AN=56;BaseQRankSum=11.171;DP=975;FS=7.961;HRun=0;HaplotypeScore=282.4644;InbreedingCoeff=0.8370;MQ=47.84;MQ0=22;MQRankSum=-5.369;QD=11.99;ReadPosRankSum=-5.723;VQSLOD=1.4795;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:15,12:27:4.28:104,0,4	1/1:2,8:10:15.03:188,15,0	0/0:69,0:17:31.74:0,32,527	0/0:88,0:28:24.38:0,24,557	0/0:32,0:32:81.26:0,81,1323	1/1:7,21:28:23.82:297,24,0	1/1:7,17:24:29.77:381,30,0	0/0:28,0:26:26.97:0,27,270	1/1:4,9:13:15.92:192,16,0	0/0:56,3:58:68.23:0,68,2093	0/0:20,0:20:54.17:0,54,870	0/0:57,0:56:99:0,129,2052	1/1:3,29:32:53.63:639,54,0	1/1:2,24:26:23.89:299,24,0	0/0:40,3:43:19.44:0,19,1391	0/0:38,1:39:70.19:0,70,1693	0/1:15,13:29:33.45:324,0,33	1/1:12,11:23:33.15:444,33,0	0/0:16,0:11:19.27:0,19,185	0/0:22,1:22:28.97:0,29,281	0/0:99,0:93:72.18:0,72,783	1/1:3,22:25:30.04:382,30,0	1/1:3,8:11:2.97:38,3,0	1/1:21,16:37:20.98:253,21,0	1/1:4,19:23:11.94:153,12,0	0/0:43,0:43:32.76:0,33,1532	0/0:25,0:25:41.62:0,42,396	0/0:23,1:24:25.03:0,25,943
chr10	103046285	.	G	GAC	5308.83	PASS	AB=0.734;AC=20;AF=0.357;AN=56;BaseQRankSum=6.147;DP=1012;FS=9.459;HRun=0;HaplotypeScore=314.7900;InbreedingCoeff=-0.1237;MQ=47.11;MQ0=42;MQRankSum=-4.621;QD=9.03;ReadPosRankSum=-6.246;VQSLOD=2.2572;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:27,22:50:24.76:460,0,25	1/1:4,4:8:12.04:198,12,0	0/0:55,0:10:27.04:0,27,307	0/0:74,0:14:13.28:0,13,147	0/0:34,0:34:57.06:0,57,647	1/1:6,4:10:8:64,8,0	0/1:24,17:39:99:491,0,109	0/1:25,18:39:99:708,0,183	0/1:18,20:38:75.49:363,0,75	0/0:53,0:48:99:0,132,1626	0/0:25,0:25:57.18:0,57,712	0/0:54,0:54:99:0,144,1762	0/1:18,15:32:50.39:366,0,50	0/1:32,13:45:99:342,0,125	0/0:26,0:26:48.14:0,48,600	0/0:33,0:33:45.32:0,45,798	0/1:21,10:32:35.07:441,0,35	0/1:17,8:26:99:362,0,100	0/1:23,9:23:99:414,0,150	0/1:20,6:25:39.80:183,0,40	0/1:56,20:76:92.21:315,0,92	0/1:24,13:37:99:206,0,226	0/1:13,9:22:43.75:181,0,44	1/1:27,5:32:8.62:135,9,0	0/1:18,15:33:74.77:81,0,75	0/0:36,0:34:90.04:0,90,1049	0/0:15,0:15:30.18:0,30,329	0/0:14,0:15:44.97:0,45,528
chr10	103046299	.	G	GAC	711.28	PASS	AB=0.993;AC=20;AF=0.357;AN=56;BaseQRankSum=12.868;DP=976;FS=35.038;HRun=0;HaplotypeScore=315.8704;InbreedingCoeff=0.1233;MQ=48.57;MQ0=42;MQRankSum=-8.933;QD=1.35;ReadPosRankSum=1.591;VQSLOD=1.3437;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:40:12.19:54,12,0	0/1:8,0:8:0.76:17,0,1	0/0:66,0:14:33.52:0,34,361	0/0:72,0:17:36.40:0,36,356	0/0:29,0:29:75.09:0,75,973	1/1:13,0:12:1.72:4,2,0	0/1:41,0:37:13.57:14,0,95	0/1:39,0:36:81.76:82,0,345	1/1:34,1:35:7.31:32,7,0	0/0:57,0:57:99:0,160,2147	0/0:20,0:20:60.18:0,60,799	0/0:54,0:54:99:0,147,1972	0/1:33,0:32:39.26:161,0,39	0/1:41,1:42:35.09:35,0,45	0/0:21,0:21:38.99:0,39,629	0/0:32,0:32:77.45:0,77,1105	0/1:30,1:31:99:180,0,163	1/1:22,0:21:6.93:56,7,0	0/1:32,0:25:80.11:80,0,142	0/1:23,0:22:5.43:29,0,5	0/1:75,2:73:41.57:42,0,129	0/1:33,0:33:26.56:72,0,27	0/0:21,0:21:2.91:0,3,9	0/1:24,0:24:2.54:16,0,3	0/1:33,0:33:1.19:4,0,1	0/0:40,0:38:99:0,105,1364	0/0:16,0:16:30.18:0,30,312	0/0:21,0:21:63.13:0,63,785
chr10	103046351	.	A	AACACACAC	7538.30	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=7.433;DP=933;FS=3.454;HRun=0;HaplotypeScore=292.4804;InbreedingCoeff=0.7392;MQ=49.08;MQ0=18;MQRankSum=-8.564;QD=10.88;ReadPosRankSum=-7.046;VQSLOD=2.1246;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:41:27.02:290,27,0	1/1:13,0:14:14.96:245,15,0	0/1:59,0:19:24.62:25,0,292	0/1:45,0:23:23.67:24,0,255	0/0:30,0:31:69.20:0,69,1554	1/1:21,0:21:23.69:305,24,0	1/1:28,0:24:29.90:298,30,0	1/1:39,0:33:35.99:546,36,0	1/1:30,0:32:38.96:592,39,0	0/0:45,0:48:83.88:0,84,2062	0/0:24,0:25:51.15:0,51,1169	0/0:36,0:37:87.28:0,87,2063	1/1:32,0:35:52.43:782,52,0	1/1:16,0:25:3.01:43,3,0	1/1:10,1:28:9.02:114,9,0	0/0:34,0:38:96.19:0,96,2142	1/1:28,4:34:44.18:894,44,0	1/1:19,0:19:17.99:262,18,0	1/1:22,2:16:10.28:291,10,0	1/1:6,16:25:37.37:840,37,0	1/1:69,1:69:30.83:579,31,0	1/1:13,0:30:8.89:96,9,0	1/1:13,0:35:5.97:61,6,0	1/1:26,0:26:6.01:77,6,0	1/1:30,0:29:44.63:490,45,0	0/0:35,0:36:79:0,79,1942	1/1:9,13:24:23.20:686,23,0	0/0:25,0:25:45.10:0,45,992
chr10	103047328	.	CG	C	9149.83	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=7.708;DP=519;FS=0.361;HRun=7;HaplotypeScore=57.6027;InbreedingCoeff=0.9962;MQ=86.46;MQ0=0;MQRankSum=-2.704;QD=26.52;ReadPosRankSum=2.963;VQSLOD=5.4820;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,24:30:66.12:665,66,0	1/1:1,7:8:18.04:184,18,0	0/0:20,0:20:45.81:0,46,569	0/0:17,0:17:42.12:0,42,508	0/0:21,0:21:48.13:0,48,585	1/1:3,17:20:51.11:520,51,0	1/1:2,21:23:54.12:551,54,0	1/1:7,23:30:69.14:697,69,0	1/1:2,13:15:39.08:397,39,0	0/0:16,0:16:45.14:0,45,556	0/0:15,0:15:39.11:0,39,477	0/0:17,0:17:48.15:0,48,600	1/1:0,17:17:51.12:520,51,0	1/1:1,14:15:42.09:428,42,0	1/1:0,13:13:39.09:398,39,0	0/0:19,0:19:57.17:0,57,704	1/1:3,22:25:66.12:664,66,0	1/1:0,18:18:54.12:550,54,0	1/1:1,5:6:15.03:153,15,0	1/1:3,19:22:54.11:550,54,0	1/1:1,12:13:36.08:367,36,0	1/1:3,17:20:54.12:550,54,0	1/1:1,17:18:51.12:520,51,0	1/1:1,16:17:51.12:520,51,0	1/1:1,13:14:39.09:398,39,0	0/0:27,0:27:75.24:0,75,943	1/1:4,17:20:51.11:520,51,0	0/0:22,0:22:66.21:0,66,830
chr10	103047405	.	GA	G	4404.68	PASS	AB=0.799;AC=27;AF=0.482;AN=56;BaseQRankSum=-1.919;DP=485;FS=3.504;HRun=11;HaplotypeScore=72.7943;InbreedingCoeff=0.7616;MQ=82.32;MQ0=0;MQRankSum=-1.714;QD=15.62;ReadPosRankSum=4.486;VQSLOD=5.6668;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,17:25:28.99:419,29,0	1/1:3,6:9:20.95:168,21,0	0/1:27,1:20:17.72:18,0,119	0/0:22,1:16:5.52:0,6,207	0/0:14,0:14:36.04:0,36,371	1/1:3,17:21:49.97:400,50,0	1/1:4,21:25:59.92:493,60,0	0/0:7,0:21:44.27:0,44,258	1/1:5,11:16:35.90:292,36,0	0/0:16,0:16:39.09:0,39,409	0/0:13,0:13:27.06:0,27,280	0/0:9,0:9:18.03:0,18,185	1/1:5,10:15:32.92:270,33,0	1/1:9,11:20:3.91:239,4,0	0/0:12,0:14:29.04:0,29,312	0/0:19,0:20:40.95:0,41,460	1/1:3,14:18:44.94:369,45,0	1/1:4,21:26:29.98:442,30,0	0/1:3,1:8:6.55:7,0,54	0/0:11,0:19:30.78:0,31,179	0/0:7,0:15:40.52:0,41,259	1/1:5,9:15:34.37:260,34,0	0/1:4,12:16:16.51:253,0,17	1/1:0,18:19:52.98:425,53,0	1/1:6,14:20:43.97:351,44,0	0/0:13,0:14:26.26:0,26,240	0/0:9,0:17:36.36:0,36,232	0/0:6,0:8:20.70:0,21,180
chr10	103047498	.	GTT	G	10252.43	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=3.480;DP=473;FS=1.326;HRun=7;HaplotypeScore=66.8658;InbreedingCoeff=0.9954;MQ=82.20;MQ0=2;MQRankSum=-2.296;QD=31.07;ReadPosRankSum=3.328;VQSLOD=4.8088;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:22:66.17:810,66,0	1/1:6,5:11:30.08:359,30,0	0/0:24,0:20:15.30:0,15,449	0/0:18,0:16:29.92:0,30,404	0/0:18,0:18:51.17:0,51,865	1/1:0,27:27:60.19:764,60,0	1/1:2,12:14:36.11:459,36,0	1/1:6,24:30:68.94:840,69,0	1/1:4,9:13:30.09:377,30,0	0/0:17,0:16:45.15:0,45,771	0/0:10,0:10:24.08:0,24,397	0/0:12,0:12:33.11:0,33,577	1/1:2,13:15:42.13:534,42,0	1/1:0,19:18:42.07:514,42,0	0/0:3,0:11:26.32:0,26,103	0/0:19,0:19:48.16:0,48,819	1/1:6,16:22:57.18:718,57,0	1/1:1,14:15:42.13:534,42,0	1/1:0,18:18:54.17:677,54,0	1/1:7,14:21:57.15:696,57,0	1/1:1,22:23:51.16:650,51,0	1/1:1,11:12:30.09:380,30,0	1/1:2,19:21:44.66:572,45,0	1/1:2,10:11:24.08:306,24,0	1/1:0,17:17:36.12:459,36,0	0/0:7,0:7:21.06:0,21,325	1/1:4,14:18:48.15:604,48,0	0/0:7,0:7:21.07:0,21,362
chr10	103050027	.	TC	T	2486.10	PASS	AB=0.606;AC=19;AF=0.380;AN=50;BaseQRankSum=7.434;DP=370;FS=19.642;HRun=2;HaplotypeScore=58.6639;InbreedingCoeff=0.7407;MQ=48.16;MQ0=33;MQRankSum=1.750;QD=18.15;ReadPosRankSum=4.222;VQSLOD=2.3993;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,4:6:9.02:102,9,0	./.	0/0:33,0:9:21.54:0,22,275	0/0:32,0:11:20.55:0,21,212	0/0:5,0:5:6.02:0,6,88	./.	0/1:7,13:15:12.62:284,0,13	0/0:2,0:2:6.02:0,6,90	1/1:4,10:11:27.09:347,27,0	0/0:13,0:10:21.05:0,21,288	0/0:4,0:4:6.01:0,6,71	0/0:34,0:27:60.16:0,60,866	1/1:5,5:8:13.87:193,14,0	1/1:5,12:14:26.91:350,27,0	0/0:11,1:8:20.93:0,21,241	0/0:18,0:17:51.13:0,51,739	1/1:6,16:21:3.72:517,4,0	1/1:8,12:18:36.10:452,36,0	0/0:5,0:3:6.02:0,6,89	0/0:6,0:5:9.03:0,9,134	0/0:27,2:21:26.53:0,27,342	1/1:4,2:5:3.01:39,3,0	./.	1/1:3,13:14:25.42:347,25,0	1/1:2,2:3:3.01:39,3,0	0/0:18,0:17:48.13:0,48,710	0/0:6,0:6:15.05:0,15,218	0/0:10,0:9:27.09:0,27,404
chr10	103050211	.	CCTGCCT	C	5939.38	PASS	AB=0.608;AC=29;AF=0.558;AN=52;BaseQRankSum=6.722;DP=535;FS=51.660;HRun=0;HaplotypeScore=93.8096;InbreedingCoeff=0.7643;MQ=45.55;MQ0=60;MQRankSum=-8.136;QD=17.84;ReadPosRankSum=4.161;VQSLOD=2.2120;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,20:27:61.11:605,0,61	1/1:2,10:12:18.06:364,18,0	0/0:10,0:2:6.02:0,6,164	0/0:13,0:6:8.42:0,8,162	0/0:10,0:10:27.09:0,27,733	1/1:2,11:13:15.05:319,15,0	1/1:21,21:37:21.07:447,21,0	1/1:4,12:13:33.02:462,33,0	1/1:1,23:24:33.11:702,33,0	0/0:18,0:15:29.58:0,30,740	0/0:7,0:3:6.02:0,6,200	0/0:41,0:34:73.60:0,74,2122	1/1:3,21:24:36.12:766,36,0	1/1:13,21:30:15.05:299,15,0	1/1:7,10:12:18.06:383,18,0	0/0:13,0:9:24.08:0,24,715	1/1:20,7:26:32.94:511,33,0	1/1:10,21:30:12.04:255,12,0	1/1:13,6:8:12:255,12,0	0/0:3,5:5:0:0,0,0	./.	0/0:3,12:13:0.80:0,1,2	1/1:6,8:12:2.42:63,2,0	1/1:18,6:22:10.16:250,10,0	./.	0/0:19,0:12:27.09:0,27,693	1/1:0,5:5:12.04:256,12,0	0/0:8,0:6:15.05:0,15,390
chr10	103052539	.	T	TCACACACACACA	7307.58	PASS	AB=1.000;AC=34;AF=0.630;AN=54;BaseQRankSum=4.564;DP=583;FS=4.689;HRun=0;HaplotypeScore=234.0479;InbreedingCoeff=0.6624;MQ=56.58;MQ0=14;MQRankSum=-7.387;QD=20.76;ReadPosRankSum=-5.310;VQSLOD=2.4414;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:5.87:85,6,0	1/1:6,0:6:9.03:339,9,0	0/0:44,0:19:9.03:0,9,106	0/0:48,0:21:2.98:0,3,22	0/0:11,0:13:27.06:0,27,682	1/1:19,0:19:4.09:158,4,0	0/1:22,0:22:44.53:195,0,45	1/1:27,0:25:22.63:519,23,0	1/1:27,0:27:18.06:742,18,0	0/0:29,0:26:36.57:0,37,952	0/0:10,0:11:21.07:0,21,704	0/0:21,0:21:45.11:0,45,1141	1/1:13,0:13:15.05:486,15,0	0/1:25,0:24:86.31:494,0,86	1/1:18,0:18:9.03:254,9,0	0/0:23,0:25:66.21:0,66,2056	./.	1/1:15,0:14:11.99:364,12,0	1/1:7,2:10:18.06:552,18,0	1/1:11,1:13:6.02:325,6,0	1/1:33,2:35:10.11:265,10,0	1/1:16,0:15:6.02:149,6,0	1/1:9,0:9:2.85:155,3,0	1/1:22,0:22:8.28:466,8,0	1/1:21,0:21:9.03:223,9,0	0/0:18,0:18:32.89:0,33,1055	1/1:10,4:16:27.09:1537,27,0	0/0:10,0:11:27.09:0,27,885
chr10	103052566	.	C	CAGAG	1607.25	PASS	AB=0.991;AC=26;AF=0.464;AN=56;BaseQRankSum=11.030;DP=673;FS=2.261;HRun=0;HaplotypeScore=211.3252;InbreedingCoeff=0.5989;MQ=63.32;MQ0=9;MQRankSum=-3.847;QD=4.92;ReadPosRankSum=0.713;VQSLOD=2.1991;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:47,0:48:9.73:100,10,0	1/1:7,0:7:6.01:70,6,0	0/0:44,0:21:57.18:0,57,930	0/0:42,0:21:35.92:0,36,652	0/0:18,0:18:42.11:0,42,671	1/1:23,0:22:8.29:114,8,0	0/1:24,0:24:26.57:40,0,27	0/0:25,0:23:50.09:0,50,796	1/1:30,0:30:31.53:279,32,0	0/0:26,0:24:60.19:0,60,991	0/0:17,0:17:42.13:0,42,672	0/0:22,0:22:54.17:0,54,904	1/1:14,0:15:16.38:182,16,0	0/1:26,0:26:39.98:120,0,40	0/0:27,0:27:7.59:0,8,492	0/0:30,0:30:87.21:0,87,1481	1/1:4,5:10:8.95:155,9,0	1/1:17,0:17:12.67:118,13,0	0/1:19,0:19:3.80:4,0,543	0/0:18,0:17:0.65:0,1,238	0/0:40,0:40:31.84:0,32,754	1/1:25,0:24:10.87:144,11,0	1/1:14,0:15:2.82:74,3,0	1/1:21,0:22:10.88:143,11,0	1/1:24,0:24:8.20:108,8,0	0/0:23,0:23:54.17:0,54,923	0/1:19,0:19:99:156,0,223	0/0:14,0:14:36.12:0,36,624
chr10	103054993	.	A	AT	419.66	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=8.582;DP=816;FS=15.334;HRun=0;HaplotypeScore=83.8482;InbreedingCoeff=0.7962;MQ=47.00;MQ0=68;MQRankSum=-5.085;QD=4.66;ReadPosRankSum=-2.789;VQSLOD=1.1888;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:40:99:0,105,1450	0/0:14,0:12:24.08:0,24,336	0/0:34,0:7:21.06:0,21,273	0/0:40,0:9:27.09:0,27,368	0/0:25,0:24:57.19:0,57,797	0/0:17,0:16:45.14:0,45,612	0/0:41,0:30:81.27:0,81,1132	1/1:10,3:6:8.84:55,9,0	0/0:31,0:28:66.22:0,66,923	0/0:40,0:29:87.24:0,87,1182	0/0:19,0:16:39.13:0,39,545	0/0:35,0:30:69.16:0,69,915	0/0:36,0:30:81.27:0,81,1132	0/0:38,0:35:81.27:0,81,1132	0/0:44,0:42:90.30:0,90,1257	0/0:33,0:32:81.27:0,81,1124	0/0:35,0:33:75.25:0,75,1049	0/0:25,0:21:48.16:0,48,670	0/1:15,0:11:25.60:26,0,52	1/1:19,0:19:2.98:22,3,0	1/1:13,11:21:18.37:150,18,0	0/0:32,0:26:66.22:0,66,921	0/0:27,0:25:63.18:0,63,845	0/0:40,0:34:81.25:0,81,1115	0/0:18,0:14:42.12:0,42,569	0/0:41,0:35:99:0,102,1426	1/1:8,11:18:49.25:319,49,0	0/0:14,0:14:33.11:0,33,459
chr10	103055013	.	GCTGGGAGAGCATCATGA	G	248.58	PASS	AB=1.000;AC=6;AF=0.115;AN=52;BaseQRankSum=5.008;DP=779;FS=0.000;HRun=0;HaplotypeScore=237.8332;InbreedingCoeff=0.4722;MQ=42.97;MQ0=104;MQRankSum=-2.877;QD=2.99;ReadPosRankSum=-4.438;VQSLOD=1.5509;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:32:48.16:0,48,1468	0/0:14,0:11:12.04:0,12,429	./.	./.	0/0:25,0:23:15.05:0,15,443	0/0:19,0:18:27.08:0,27,905	0/0:42,0:21:9.03:0,9,176	1/1:10,9:11:26.86:264,27,0	0/0:27,0:22:18.06:0,18,586	0/0:31,0:19:18.06:0,18,565	0/0:16,0:13:6.02:0,6,250	0/0:30,0:25:15.52:0,16,504	0/0:29,0:23:12.03:0,12,267	0/0:35,0:32:21.07:0,21,554	0/0:41,0:39:30.10:0,30,1027	0/0:31,0:28:30.10:0,30,1037	0/0:37,0:34:42.12:0,42,1324	0/0:25,0:20:21.04:0,21,741	0/1:17,0:11:5.44:5,0,78	1/1:20,0:20:3.01:39,3,0	0/1:27,0:22:59.62:60,0,84	0/0:25,0:19:9.02:0,9,242	0/0:21,0:19:21.07:0,21,606	0/0:44,0:37:59.66:0,60,1747	0/0:17,0:12:12.04:0,12,310	0/0:40,0:31:30.10:0,30,962	0/0:13,0:11:11.96:0,12,118	0/0:18,0:18:30.10:0,30,1123
chr10	103055030	.	A	AG	671.79	PASS	AB=0.835;AC=6;AF=0.115;AN=52;BaseQRankSum=9.132;DP=719;FS=16.064;HRun=1;HaplotypeScore=71.3219;InbreedingCoeff=0.5822;MQ=40.99;MQ0=113;MQRankSum=-2.690;QD=8.19;ReadPosRankSum=-1.214;VQSLOD=-0.6280;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:28:69.23:0,69,964	0/0:15,0:12:24.08:0,24,336	./.	./.	0/0:19,0:17:27.07:0,27,360	0/0:15,0:14:30.10:0,30,419	0/0:32,0:10:24.08:0,24,335	0/1:18,5:15:6.43:249,0,6	0/0:28,0:23:48.12:0,48,647	0/0:25,0:14:39.13:0,39,545	0/0:7,0:4:6.02:0,6,84	0/0:26,0:21:33.07:0,33,461	0/0:24,0:18:39.11:0,39,525	0/0:32,0:30:54.15:0,54,718	0/0:39,0:37:66.21:0,66,903	0/0:34,0:31:66.16:0,66,905	0/0:39,0:36:72.20:0,72,969	0/0:26,0:21:33.11:0,33,462	1/1:20,0:14:14.50:215,15,0	0/0:21,0:21:2.94:0,3,23	0/1:23,5:24:41.65:178,0,42	0/0:20,0:14:15.05:0,15,210	0/0:14,0:14:27.08:0,27,360	0/0:40,0:32:84.23:0,84,1152	0/0:14,0:8:21.07:0,21,283	0/0:29,0:18:54.18:0,54,755	1/1:5,5:9:19.06:160,19,0	0/0:17,0:17:39.13:0,39,543
chr10	103055132	.	GCTGGGAGAGCATCATGA	G	1002.12	PASS	AC=10;AF=0.200;AN=50;BaseQRankSum=4.554;DP=732;FS=21.465;HRun=0;HaplotypeScore=179.0616;InbreedingCoeff=0.8022;MQ=40.43;MQ0=90;MQRankSum=-2.690;QD=10.44;ReadPosRankSum=-2.778;VQSLOD=0.9876;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:20:12.03:0,12,343	0/0:11,0:9:12.04:0,12,412	./.	./.	0/0:19,0:16:15.05:0,15,532	0/0:16,0:14:18.05:0,18,515	./.	1/1:16,9:24:21.07:347,21,0	0/0:34,0:30:24.97:0,25,795	0/0:38,0:19:24.08:0,24,799	0/0:15,0:12:3.01:0,3,125	0/0:41,0:38:21.07:0,21,648	0/0:39,0:32:27.09:0,27,863	0/0:33,0:28:27.08:0,27,705	0/0:47,0:42:30.10:0,30,865	0/0:36,0:34:30.05:0,30,903	0/0:32,0:23:33.07:0,33,996	0/0:25,0:22:18.06:0,18,517	1/1:7,0:7:6.02:81,6,0	1/1:10,0:10:3.01:56,3,0	1/1:36,0:33:12.05:270,12,0	0/0:21,0:15:12.04:0,12,440	0/0:10,0:8:12.04:0,12,339	0/0:38,0:27:27.05:0,27,697	0/0:25,0:15:30.10:0,30,805	0/0:28,0:17:21.07:0,21,766	1/1:18,0:18:15.05:399,15,0	0/0:2,0:2:3.01:0,3,117
chr10	103059787	.	G	GCGACACAGCCT	14606.70	PASS	AB=0.750;AC=55;AF=0.982;AN=56;BaseQRankSum=0.585;DP=248;FS=10.322;HRun=0;HaplotypeScore=279.3918;InbreedingCoeff=-0.0653;MQ=53.48;MQ0=0;MQRankSum=-1.610;QD=58.90;ReadPosRankSum=1.220;VQSLOD=3.0668;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:16.87:650,17,0	1/1:4,0:4:6.02:198,6,0	1/1:1,1:4:12.03:445,12,0	0/1:2,0:3:24.29:144,0,24	1/1:7,0:7:3:25,3,0	1/1:12,0:12:12.51:559,13,0	1/1:8,0:8:15.05:730,15,0	1/1:6,0:6:17.98:370,18,0	1/1:8,0:8:21.07:783,21,0	1/1:12,0:12:27.08:813,27,0	1/1:5,0:5:9.03:182,9,0	1/1:14,0:14:21.07:862,21,0	1/1:14,0:14:30.99:1236,31,0	1/1:16,0:16:27.09:1138,27,0	1/1:13,0:13:18.06:583,18,0	1/1:19,0:19:42.13:1634,42,0	1/1:9,0:9:6.02:275,6,0	1/1:7,0:7:15.05:679,15,0	1/1:10,0:10:24.03:514,24,0	1/1:3,0:3:6.02:123,6,0	1/1:5,0:5:6.02:100,6,0	1/1:8,0:8:12.04:319,12,0	1/1:6,0:6:12.02:184,12,0	1/1:6,0:6:3.01:157,3,0	1/1:7,0:7:3.01:64,3,0	1/1:12,0:12:24.06:923,24,0	1/1:13,0:13:18.06:768,18,0	1/1:4,0:4:5.98:147,6,0
chr10	103063795	.	TACAC	T	536.12	PASS	AB=0.959;AC=22;AF=0.440;AN=50;BaseQRankSum=2.714;DP=396;FS=7.121;HRun=0;HaplotypeScore=74.1844;InbreedingCoeff=0.3603;MQ=67.24;MQ0=11;MQRankSum=1.236;QD=3.23;ReadPosRankSum=-0.030;VQSLOD=0.1278;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,1:28:5.99:69,6,0	1/1:3,3:6:3.01:46,3,0	./.	./.	0/0:13,0:13:9.03:0,9,175	1/1:15,0:13:5.96:44,6,0	1/1:15,6:21:8.98:92,9,0	0/0:15,0:14:0:0,0,0	1/1:9,0:10:1.25:42,1,0	0/0:11,0:11:9.02:0,9,154	./.	0/0:16,0:16:3.01:0,3,50	0/0:12,1:12:0.47:0,0,1	1/1:8,0:7:3.01:45,3,0	0/0:17,0:17:19.31:0,19,311	0/0:10,0:10:24.08:0,24,480	0/0:27,0:27:26.79:0,27,416	1/1:9,0:10:2.22:7,2,0	0/1:11,0:11:32.27:32,0,68	0/1:6,0:6:41.94:42,0,51	0/0:31,0:30:15.04:0,15,228	1/1:4,2:6:3.01:46,3,0	1/1:7,0:7:6.01:74,6,0	0/1:24,2:26:13.92:84,0,14	0/1:9,1:10:3.41:65,0,3	0/0:8,0:7:9.02:0,9,128	0/0:10,0:10:1.72:0,2,57	0/0:12,0:14:14.76:0,15,223
chr10	103066059	.	TACACAC	T	1991.67	PASS	AB=0.635;AC=27;AF=0.482;AN=56;BaseQRankSum=9.110;DP=815;FS=0.616;HRun=0;HaplotypeScore=233.9522;InbreedingCoeff=0.8192;MQ=54.33;MQ0=4;MQRankSum=-9.624;QD=4.97;ReadPosRankSum=-0.525;VQSLOD=2.5291;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,31:42:6.30:35,6,0	1/1:4,4:8:0.72:2,1,0	0/0:23,0:10:16.23:0,16,356	0/0:27,0:10:18.06:0,18,488	0/0:19,0:19:51.16:0,51,1582	1/1:2,17:21:21.06:436,21,0	1/1:9,35:43:4.66:127,5,0	0/0:20,0:23:51.17:0,51,1279	1/1:6,15:21:13.45:258,13,0	0/0:31,0:31:78.26:0,78,2280	0/0:21,0:22:33.11:0,33,970	0/0:32,0:36:78.25:0,78,2357	1/1:5,12:17:11.66:149,12,0	1/1:9,28:37:18.96:380,19,0	1/1:7,13:21:5.14:68,5,0	0/0:17,0:20:48.15:0,48,1434	1/1:10,0:33:20.73:293,21,0	1/1:13,29:43:23.18:423,23,0	0/0:28,0:29:65.99:0,66,1630	0/0:24,0:25:45.63:0,46,1281	0/0:81,0:85:99:0,186,5348	1/1:6,25:31:3.39:8,3,0	1/1:3,14:17:1.83:4,2,0	0/1:17,22:39:0.08:1,0,0	1/1:3,21:24:2.08:5,2,0	0/0:28,0:31:82.69:0,83,2436	0/0:16,0:16:39.13:0,39,1087	0/0:24,0:25:69.12:0,69,2009
chr10	103066500	.	T	TC	7908.77	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-9.266;DP=583;FS=5.533;HRun=7;HaplotypeScore=63.0352;InbreedingCoeff=0.9997;MQ=64.40;MQ0=0;MQRankSum=-1.119;QD=29.84;ReadPosRankSum=1.311;VQSLOD=5.4571;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,32:38:98.16:1171,98,0	1/1:2,11:13:29.88:361,30,0	0/0:17,0:16:39.02:0,39,361	0/0:18,0:17:33.45:0,33,298	0/0:28,0:28:78.11:0,78,746	1/1:7,16:23:51.16:613,51,0	1/1:3,24:27:54.17:652,54,0	0/0:21,0:21:51.07:0,51,490	1/1:3,8:12:27.08:318,27,0	0/0:22,0:22:54.06:0,54,513	0/0:17,0:17:45.06:0,45,429	0/0:23,0:23:60.07:0,60,567	1/1:2,16:18:51.15:605,51,0	1/1:3,16:19:48.15:580,48,0	0/0:17,0:17:51.08:0,51,492	0/0:20,0:20:51.05:0,51,483	0/0:31,0:31:81.09:0,81,772	1/1:6,24:30:78.23:923,78,0	0/0:16,0:16:45.07:0,45,433	0/0:15,0:15:42.05:0,42,402	0/0:27,0:27:72.11:0,72,695	1/1:5,24:29:66.19:785,66,0	1/1:0,18:18:54.17:652,54,0	1/1:1,20:21:60.18:714,60,0	1/1:3,14:17:45.13:534,45,0	0/0:16,0:16:41.43:0,41,385	0/0:18,0:17:54.09:0,54,520	0/0:12,0:12:36.06:0,36,348
chr10	103066575	.	G	GA	6413.40	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=7.271;DP=589;FS=1.066;HRun=10;HaplotypeScore=107.5080;InbreedingCoeff=0.8964;MQ=64.06;MQ0=1;MQRankSum=-6.507;QD=20.96;ReadPosRankSum=-1.188;VQSLOD=4.2096;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,28:39:99:994,99,0	1/1:4,8:12:24.06:255,24,0	0/1:18,0:14:48.20:48,0,62	0/0:13,0:13:7.99:0,8,102	0/0:32,0:33:93.86:0,94,736	1/1:3,18:22:35.26:541,35,0	1/1:8,11:19:7.99:390,8,0	0/0:18,0:19:49.96:0,50,396	1/1:4,14:19:50.87:497,51,0	0/0:28,0:28:74.40:0,74,601	0/0:17,0:17:50.94:0,51,419	0/0:24,0:24:62.88:0,63,510	1/1:8,11:20:41.97:428,42,0	1/1:2,3:5:9.02:96,9,0	1/1:6,21:27:74.99:760,75,0	0/0:19,0:19:53.92:0,54,440	1/1:8,1:24:53.09:300,53,0	1/1:4,19:23:35.47:570,35,0	0/0:16,0:16:35.93:0,36,295	0/0:28,1:29:36.11:0,36,484	0/0:21,0:21:50.88:0,51,412	1/1:8,19:27:32.49:543,32,0	1/1:6,17:25:13.53:497,14,0	1/1:6,9:15:24.91:245,25,0	1/1:3,7:10:24.05:250,24,0	0/0:29,1:30:38.93:0,39,511	0/0:21,0:20:41.91:0,42,341	0/0:12,0:12:20.93:0,21,170
chr10	103066606	.	C	CA	18398.82	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-3.803;DP=630;FS=1.805;HRun=0;HaplotypeScore=76.1008;InbreedingCoeff=0.9999;MQ=76.16;MQ0=0;MQRankSum=-2.733;QD=43.50;ReadPosRankSum=-0.921;VQSLOD=4.8862;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:41:99:1694,111,0	1/1:3,9:12:36.12:559,36,0	0/0:15,0:13:35.88:0,36,437	0/0:18,0:18:42.58:0,43,556	0/0:36,0:36:99:0,105,1425	1/1:1,18:19:57.19:894,57,0	1/1:0,18:18:51.17:815,51,0	1/1:0,28:26:81.28:1292,81,0	1/1:1,17:19:54.14:805,54,0	0/0:29,0:29:87.28:0,87,1203	0/0:27,0:27:78.26:0,78,1079	0/0:22,0:22:66.22:0,66,918	1/1:0,19:19:54.18:855,54,0	1/1:0,17:17:48.16:756,48,0	1/1:1,20:20:60.20:930,60,0	0/0:13,0:13:39.13:0,39,546	1/1:1,21:22:57.19:903,57,0	1/1:1,24:25:72.25:1150,72,0	1/1:3,16:19:51.14:763,51,0	1/1:2,31:33:87.30:1390,87,0	1/1:1,22:24:69.23:1083,69,0	1/1:2,22:24:66.22:1039,66,0	1/1:0,23:23:66.22:1048,66,0	1/1:2,16:18:45.15:718,45,0	1/1:1,16:17:48.16:753,48,0	0/0:32,0:32:93.31:0,93,1301	1/1:0,22:23:60.20:951,60,0	0/0:15,0:15:45.15:0,45,629
chr10	103068219	.	TGGG	T	7225.92	PASS	AB=0.931;AC=25;AF=0.446;AN=56;BaseQRankSum=7.140;DP=575;FS=27.497;HRun=11;HaplotypeScore=89.8773;InbreedingCoeff=0.8760;MQ=67.82;MQ0=0;MQRankSum=-2.700;QD=22.37;ReadPosRankSum=11.772;VQSLOD=-0.2051;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:10,32:43:80.12:1010,80,0	1/1:2,7:9:21.07:274,21,0	0/0:10,0:10:18.02:0,18,258	0/0:13,0:12:19.61:0,20,223	0/0:17,0:18:14.59:0,15,178	1/1:7,12:19:30.07:391,30,0	1/1:5,27:32:57.17:749,57,0	0/0:17,0:17:18:0,18,226	1/1:4,14:18:36.10:472,36,0	0/0:17,0:18:15.03:0,15,219	0/0:3,0:4:6.01:0,6,72	0/0:27,0:27:42.45:0,42,690	1/1:5,21:26:51.05:657,51,0	1/1:3,25:28:57.16:749,57,0	0/0:20,0:21:21.07:0,21,417	0/1:25,1:27:6.38:6,0,420	0/0:23,0:29:17.09:0,17,276	1/1:3,31:34:69.19:907,69,0	0/0:16,0:18:31.26:0,31,385	0/0:11,0:11:18.05:0,18,285	0/0:37,0:37:69.11:0,69,952	1/1:6,17:23:51.14:637,51,0	1/1:4,11:15:24.05:308,24,0	1/1:2,23:25:42.13:541,42,0	1/1:7,16:24:42.03:525,42,0	0/0:14,0:16:6.01:0,6,78	0/0:9,0:10:18.02:0,18,272	0/0:1,0:3:3.01:0,3,43
chr10	103068228	.	GGGT	G	2885.51	PASS	AB=0.958;AC=14;AF=0.250;AN=56;BaseQRankSum=14.018;DP=518;FS=28.535;HRun=0;HaplotypeScore=96.2816;InbreedingCoeff=0.0167;MQ=64.66;MQ0=0;MQRankSum=-0.621;QD=9.75;ReadPosRankSum=14.863;VQSLOD=-0.0280;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:39,2:41:9.81:407,0,10	1/1:9,1:10:1.74:158,2,0	0/0:9,0:9:20.99:0,21,275	0/0:10,0:9:17.15:0,17,215	0/0:12,0:12:23.45:0,23,325	0/1:14,2:16:29.56:167,0,30	0/1:31,0:31:24.16:294,0,24	0/0:16,0:16:32.96:0,33,397	1/1:15,1:16:15.97:210,16,0	0/0:14,0:14:35.34:0,35,415	0/0:3,0:3:6.02:0,6,92	0/0:21,0:21:50.18:0,50,752	0/1:25,2:27:36.04:299,0,36	0/1:30,1:31:22.38:304,0,22	0/0:18,0:18:44.97:0,45,659	0/0:20,0:20:36.46:0,36,641	0/0:19,0:19:36.44:0,36,482	0/1:39,0:39:99:320,0,131	0/0:21,0:21:53.63:0,54,590	0/0:9,0:9:20.97:0,21,325	0/0:30,0:30:63.03:0,63,897	0/1:23,2:25:20.72:293,0,21	0/1:13,0:13:18.56:117,0,19	0/1:26,1:27:18.81:238,0,19	0/1:19,1:20:4.32:237,0,4	0/0:10,0:10:20.96:0,21,200	0/0:8,0:8:21.03:0,21,333	0/0:2,0:2:2.98:0,3,22
chr10	103069082	.	AG	A	7275.63	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=19.066;DP=658;FS=21.438;HRun=1;HaplotypeScore=149.8323;InbreedingCoeff=0.9984;MQ=85.51;MQ0=0;MQRankSum=-17.353;QD=33.22;ReadPosRankSum=0.221;VQSLOD=2.7098;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:40:86.97:1185,87,0	1/1:0,9:9:27.09:376,27,0	0/0:27,0:27:80.93:0,81,1227	0/0:27,0:26:68.65:0,69,1086	0/0:24,0:24:72.22:0,72,1126	1/1:0,13:13:33.11:448,33,0	1/1:0,19:19:48.16:657,48,0	0/0:36,0:36:99:0,105,1677	1/1:0,24:24:66.22:904,66,0	0/0:34,0:34:99:0,102,1552	0/0:21,0:21:63.20:0,63,984	0/0:23,0:23:66.23:0,66,1055	1/1:0,19:19:54.18:736,54,0	1/1:0,14:14:39.13:544,39,0	0/0:21,0:21:63.20:0,63,984	0/0:25,0:25:75.23:0,75,1150	0/0:46,0:46:99:0,138,2175	1/1:0,9:9:24.08:334,24,0	0/0:27,0:27:81.28:0,81,1284	0/0:18,0:18:54.17:0,54,833	0/0:43,0:43:99:0,129,2056	1/1:0,18:18:45.15:628,45,0	1/1:0,24:24:54.18:753,54,0	1/1:0,16:16:18.05:251,18,0	1/1:0,14:14:33.10:461,33,0	0/0:31,0:31:93.32:0,93,1483	0/0:19,0:19:57.16:0,57,877	0/0:17,0:17:51.17:0,51,813
chr10	103069574	.	A	ACACG	2782.67	PASS	AB=0.752;AC=22;AF=0.393;AN=56;BaseQRankSum=11.473;DP=521;FS=34.812;HRun=0;HaplotypeScore=131.4894;InbreedingCoeff=0.8516;MQ=59.12;MQ0=2;MQRankSum=-9.919;QD=19.88;ReadPosRankSum=0.373;VQSLOD=1.7312;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,1:12:11.05:134,11,0	1/1:4,3:7:9.02:208,9,0	0/0:28,0:19:57.20:0,57,1069	0/0:30,0:25:60.20:0,60,1079	0/0:29,0:29:87.27:0,87,1529	1/1:10,2:12:9.03:192,9,0	1/1:9,3:12:9.63:145,10,0	0/0:23,0:23:63.19:0,63,1083	1/1:9,7:16:24.08:532,24,0	0/0:21,0:21:60.21:0,60,1133	0/0:18,0:18:51.17:0,51,945	0/0:27,0:27:81.26:0,81,1504	1/1:8,5:13:21.07:473,21,0	1/1:7,5:12:21.05:443,21,0	0/0:18,0:18:54.17:0,54,993	0/0:23,0:23:69.22:0,69,1269	0/0:28,0:28:63.22:0,63,1174	1/1:6,2:8:6.02:131,6,0	0/0:21,0:21:57.20:0,57,1063	0/0:25,0:25:72.23:0,72,1325	0/0:23,0:23:60.21:0,60,1129	0/1:10,3:13:0.03:170,0,0	0/1:5,4:9:3.04:100,0,3	1/1:6,5:11:10.08:116,10,0	1/1:10,5:15:9.09:348,9,0	0/0:21,0:21:60.19:0,60,1070	0/0:34,0:34:99:0,99,1779	0/0:12,0:12:36.12:0,36,664
chr10	103069591	.	G	GACAA	2196.28	PASS	AB=0.695;AC=18;AF=0.321;AN=56;BaseQRankSum=12.479;DP=500;FS=11.726;HRun=0;HaplotypeScore=129.0574;InbreedingCoeff=0.5622;MQ=57.60;MQ0=2;MQRankSum=-11.967;QD=18.77;ReadPosRankSum=-3.369;VQSLOD=2.2164;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:4,4:8:2.60:71,0,3	1/1:3,3:6:2.67:163,3,0	0/0:27,0:20:54.15:0,54,838	0/0:24,0:19:47.92:0,48,700	0/0:22,0:22:63.09:0,63,934	0/1:9,3:12:0.13:150,0,0	1/1:7,6:13:16.55:218,17,0	0/0:21,0:21:60.13:0,60,893	0/1:7,9:16:15.68:308,0,16	0/0:30,0:30:84.22:0,84,1404	0/0:19,0:19:57.20:0,57,1047	0/0:28,0:28:81.22:0,81,1382	1/1:1,6:7:18.03:388,18,0	0/1:3,4:7:17.71:218,0,18	0/0:19,0:19:57.15:0,57,969	0/0:26,0:26:75.17:0,75,1201	0/0:27,0:27:72.19:0,72,1222	1/1:4,2:6:9:162,9,0	0/0:27,0:27:72.10:0,72,1050	0/0:27,0:27:81.22:0,81,1365	0/0:23,0:23:63.07:0,63,958	0/1:6,4:10:9.10:128,0,9	0/1:6,4:10:8.19:55,0,8	1/1:3,7:10:14.92:165,15,0	1/1:6,6:12:14.45:358,14,0	0/0:19,0:19:56.98:0,57,890	0/0:31,0:31:90.26:0,90,1574	0/0:13,0:13:39.08:0,39,640
chr10	103069621	.	AC	A	2599.55	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=13.239;DP=444;FS=14.361;HRun=1;HaplotypeScore=92.3803;InbreedingCoeff=0.9446;MQ=71.53;MQ0=0;MQRankSum=-12.825;QD=27.36;ReadPosRankSum=-1.167;VQSLOD=2.0647;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:4:6.02:83,6,0	1/1:0,4:4:9.03:122,9,0	0/0:21,0:20:60.10:0,60,815	0/0:13,0:13:21.13:0,21,409	0/0:23,0:23:69.19:0,69,971	1/1:0,9:9:21.07:292,21,0	1/1:1,13:14:36.04:457,36,0	0/0:26,0:26:75.21:0,75,1049	1/1:0,11:11:15.05:208,15,0	0/0:33,0:33:96.31:0,96,1403	0/0:18,0:18:54.13:0,54,745	0/0:27,0:27:81.27:0,81,1210	1/1:0,8:8:18.06:246,18,0	1/1:1,6:7:12:145,12,0	0/0:12,0:12:36.09:0,36,498	0/0:27,0:27:81.27:0,81,1209	0/0:24,0:24:72.14:0,72,1007	1/1:0,3:3:6.02:83,6,0	0/0:28,0:28:84.26:0,84,1199	0/0:19,0:19:57.18:0,57,831	0/0:18,0:18:54.17:0,54,787	1/1:0,10:10:30.06:395,30,0	1/1:1,6:7:21.03:270,21,0	1/1:0,7:7:9.03:125,9,0	1/1:1,10:11:30.06:395,30,0	0/0:23,0:23:69.19:0,69,956	0/0:24,0:24:72.21:0,72,1033	0/0:13,0:13:36.10:0,36,517
chr10	103069649	.	A	AAG	3868.84	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=13.179;DP=467;FS=8.023;HRun=0;HaplotypeScore=100.8841;InbreedingCoeff=0.9217;MQ=75.34;MQ0=0;MQRankSum=-12.912;QD=35.17;ReadPosRankSum=0.170;VQSLOD=5.6511;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:4:6.02:110,6,0	1/1:1,2:3:9.03:150,9,0	0/0:20,0:20:10.35:0,10,643	0/0:18,0:18:38.77:0,39,476	0/0:26,0:26:78.21:0,78,1105	1/1:1,9:10:24.08:442,24,0	1/1:2,14:16:42.09:732,42,0	0/0:29,0:29:78.21:0,78,1032	1/1:3,10:13:15.05:276,15,0	0/0:35,0:35:96.31:0,96,1380	0/0:23,0:23:69.22:0,69,997	0/0:25,0:25:75.25:0,75,1103	1/1:3,7:10:15.05:270,15,0	1/1:4,6:10:11.97:184,12,0	0/0:17,0:17:51.15:0,51,714	0/0:23,0:23:66.20:0,66,930	0/0:20,0:20:60.17:0,60,844	1/1:0,3:3:6.02:110,6,0	0/0:19,0:19:54.15:0,54,756	0/0:17,0:17:51.16:0,51,732	0/0:21,0:21:63.17:0,63,868	1/1:1,12:13:33.11:599,33,0	1/1:1,7:9:21.07:380,21,0	1/1:2,4:6:3.01:53,3,0	1/1:2,11:13:33.04:563,33,0	0/0:29,0:29:84.26:0,84,1200	0/0:17,0:17:48.12:0,48,648	0/0:18,0:18:54.13:0,54,714
chr10	103069708	.	T	TGGAGGG	4473.24	PASS	AC=22;AF=0.407;AN=54;BaseQRankSum=11.130;DP=398;FS=21.786;HRun=0;HaplotypeScore=101.1325;InbreedingCoeff=0.8957;MQ=103.42;MQ0=0;MQRankSum=-11.403;QD=53.89;ReadPosRankSum=1.813;VQSLOD=3.3261;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:4:3.01:93,3,0	1/1:0,2:2:3.01:93,3,0	0/0:32,0:32:87.30:0,87,1970	0/0:23,0:23:65.47:0,65,1281	0/0:18,0:18:51.18:0,51,1229	1/1:1,4:5:6.02:187,6,0	1/1:3,4:7:12.04:318,12,0	0/0:14,0:14:33.11:0,33,813	1/1:1,5:6:15.05:471,15,0	0/0:19,0:19:57.20:0,57,1382	0/0:15,0:15:45.15:0,45,1086	0/0:23,0:23:66.22:0,66,1492	1/1:1,7:8:18.06:520,18,0	1/1:6,6:13:30.06:733,30,0	0/0:20,0:20:57.20:0,57,1404	0/0:25,0:25:75.24:0,75,1718	0/0:18,0:18:54.18:0,54,1253	1/1:0,1:1:3.01:95,3,0	0/0:22,0:22:66.23:0,66,1575	0/0:16,0:16:48.16:0,48,1175	0/0:23,0:23:69.24:0,69,1594	1/1:6,11:17:30.10:853,30,0	1/1:3,6:11:18.06:523,18,0	./.	1/1:2,7:9:21.07:588,21,0	0/0:11,0:11:33.11:0,33,813	0/0:17,0:17:48.15:0,48,1103	0/0:18,0:18:51.18:0,51,1256
chr10	103069710	.	TG	T	454.05	PASS	AB=0.583;AC=20;AF=0.370;AN=54;BaseQRankSum=10.730;DP=401;FS=14.400;HRun=5;HaplotypeScore=74.8527;InbreedingCoeff=0.7984;MQ=104.56;MQ0=0;MQRankSum=-10.689;QD=5.97;ReadPosRankSum=2.866;VQSLOD=-0.2579;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:4:2.92:17,3,0	0/1:0,2:2:0.84:12,0,1	0/0:31,0:31:77.85:0,78,968	0/0:25,0:25:61.63:0,62,749	0/0:18,0:18:51.14:0,51,660	1/1:1,4:5:5.88:36,6,0	1/1:1,4:5:8.80:53,9,0	0/0:15,0:15:42.13:0,42,557	1/1:0,5:5:14.46:80,14,0	0/0:22,0:22:63.19:0,63,815	0/0:16,0:16:48.14:0,48,625	0/0:23,0:23:60.20:0,60,820	1/1:1,7:8:14.81:72,15,0	0/1:6,6:12:8.09:61,0,8	0/0:20,0:20:57.08:0,57,779	0/0:24,0:24:63.20:0,63,846	0/0:18,0:18:51.15:0,51,680	1/1:0,1:1:2.96:19,3,0	0/0:23,0:23:63.20:0,63,846	0/0:17,0:17:51.17:0,51,694	0/0:23,0:23:63.19:0,63,830	1/1:4,11:15:25.79:135,26,0	1/1:5,5:10:14.74:68,15,0	./.	1/1:2,7:9:17.39:96,17,0	0/0:14,0:14:39.09:0,39,509	0/0:17,0:17:48.16:0,48,656	0/0:18,0:18:51.17:0,51,698
chr10	103069770	.	GAGAAAA	G	4761.68	PASS	AC=22;AF=0.407;AN=54;BaseQRankSum=11.938;DP=400;FS=82.069;HRun=0;HaplotypeScore=102.7471;InbreedingCoeff=0.9629;MQ=73.53;MQ0=0;MQRankSum=-12.261;QD=53.50;ReadPosRankSum=5.185;VQSLOD=1.3523;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,13:18:42.14:1005,42,0	./.	0/0:18,0:17:42.10:0,42,953	0/0:24,0:16:26.75:0,27,724	0/0:13,0:13:39.12:0,39,1191	1/1:1,6:7:18.06:436,18,0	1/1:2,3:5:15.02:280,15,0	0/0:24,0:24:69.65:0,70,1951	1/1:0,9:9:27.09:621,27,0	0/0:17,0:17:45.13:0,45,1264	0/0:15,0:15:42.10:0,42,1112	0/0:19,0:19:57.15:0,57,1688	1/1:1,4:5:9.03:219,9,0	1/1:1,12:13:39.09:877,39,0	0/0:17,0:17:39.07:0,39,897	0/0:21,0:21:60.16:0,60,1729	0/0:22,0:22:66.23:0,66,2283	1/1:0,3:3:9.03:208,9,0	0/0:27,0:27:78.24:0,78,2060	0/0:18,0:18:52.70:0,53,1521	0/0:19,0:19:57.15:0,57,1715	1/1:1,6:7:18.02:357,18,0	1/1:1,6:7:12:220,12,0	1/1:0,9:9:10.99:269,11,0	1/1:0,6:6:12.04:269,12,0	0/0:16,0:15:48.16:0,48,1375	0/0:20,0:20:60.13:0,60,1713	0/0:16,0:16:39.11:0,39,1278
chr10	103069771	.	AG	A	1084.99	PASS	AC=22;AF=0.407;AN=54;BaseQRankSum=11.977;DP=412;FS=58.951;HRun=1;HaplotypeScore=80.4164;InbreedingCoeff=0.9539;MQ=73.67;MQ0=0;MQRankSum=-11.414;QD=12.62;ReadPosRankSum=4.084;VQSLOD=-0.2717;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:40.79:268,41,0	./.	0/0:19,0:18:43.05:0,43,422	0/0:26,0:17:20.26:0,20,266	0/0:14,0:14:35.82:0,36,422	1/1:7,0:7:17.78:119,18,0	1/1:5,0:5:12.84:73,13,0	0/0:26,0:26:41.72:0,42,729	1/1:9,0:9:23.14:160,23,0	0/0:16,0:16:45.10:0,45,534	0/0:15,0:15:45.02:0,45,477	0/0:22,0:22:56.48:0,56,702	1/1:4,0:4:8.90:60,9,0	1/1:14,0:14:37.95:247,38,0	0/0:18,0:18:18.88:0,19,242	0/0:20,2:22:18.51:0,19,635	0/0:23,0:23:66.17:0,66,841	1/1:3,0:3:8.61:52,9,0	0/0:26,1:27:17.64:0,18,695	0/0:19,0:19:50.92:0,51,612	0/0:19,0:19:57.04:0,57,670	1/1:7,0:7:17.54:114,18,0	1/1:7,0:7:10.94:66,11,0	1/1:9,0:9:10.42:63,10,0	1/1:6,0:6:11.84:77,12,0	0/0:20,0:19:46.54:0,47,491	0/0:20,0:20:53.78:0,54,598	0/0:15,1:16:39.03:0,39,478
chr10	103069870	.	G	GA	8121.55	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=18.425;DP=597;FS=4.945;HRun=2;HaplotypeScore=99.7584;InbreedingCoeff=0.9942;MQ=83.98;MQ0=0;MQRankSum=-8.886;QD=34.56;ReadPosRankSum=2.676;VQSLOD=4.9962;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,40:47:99:1377,99,0	1/1:1,10:12:27.06:366,27,0	0/0:24,0:24:66.17:0,66,779	0/0:19,0:19:54.12:0,54,638	0/0:23,0:23:66.21:0,66,817	1/1:1,10:11:30.10:431,30,0	1/1:0,30:30:75.12:1010,75,0	0/0:23,0:22:63.18:0,63,761	1/1:0,14:14:42.14:604,42,0	0/0:25,0:25:69.22:0,69,856	0/0:10,0:10:30.09:0,30,372	0/0:26,0:26:78.25:0,78,966	1/1:2,16:18:42.14:604,42,0	1/1:1,23:24:63.14:862,63,0	0/0:18,0:18:48.15:0,48,595	0/0:17,1:18:11.09:0,11,589	0/0:27,0:27:75.21:0,75,914	1/1:1,12:13:36.12:518,36,0	0/0:27,0:27:75.23:0,75,919	0/0:32,0:32:93.29:0,93,1153	0/0:47,0:47:99:0,132,1617	1/1:0,12:12:30.06:408,30,0	1/1:2,10:12:30.10:431,30,0	1/1:1,21:22:63.21:905,63,0	1/1:1,19:19:42.14:605,42,0	0/0:16,0:16:42.13:0,42,520	0/0:15,0:15:36.07:0,36,428	0/0:12,0:12:36.11:0,36,442
chr10	103069963	.	T	TG	980.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.305;DP=656;FS=1.499;HRun=6;HaplotypeScore=132.4828;InbreedingCoeff=0.9934;MQ=87.58;MQ0=0;MQRankSum=0.033;QD=28.02;ReadPosRankSum=-0.833;VQSLOD=1.6834;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,117,1193	0/0:7,0:7:21.05:0,21,214	0/0:29,0:28:72.16:0,72,733	0/0:23,0:23:50.27:0,50,530	0/0:19,0:19:50.87:0,51,519	0/0:19,0:19:48.09:0,48,483	0/0:31,0:31:84.17:0,84,849	0/0:35,0:35:83.89:0,84,826	0/0:21,0:21:60.14:0,60,611	0/0:21,0:21:48.10:0,48,485	0/0:14,0:14:39.07:0,39,388	0/0:20,0:20:57.13:0,57,581	0/0:23,0:23:63.14:0,63,641	0/0:18,0:18:39.09:0,39,398	0/0:17,0:17:51.12:0,51,520	0/0:17,0:17:42.07:0,42,421	1/1:3,32:35:87.23:1076,87,0	0/0:34,0:34:90.15:0,90,900	0/0:27,0:27:72.16:0,72,734	0/0:20,0:20:38.73:0,39,373	0/0:32,0:32:87.19:0,87,888	0/0:9,0:9:24.05:0,24,245	0/0:18,0:18:33.07:0,33,336	0/0:30,0:30:84.19:0,84,857	0/0:26,0:26:72.16:0,72,733	0/0:27,0:27:63.13:0,63,642	0/0:20,0:20:48.09:0,48,483	0/0:15,0:15:45.10:0,45,458
chr10	103070989	.	AAT	A	1421.34	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.990;DP=774;FS=0.665;HRun=0;HaplotypeScore=90.2349;InbreedingCoeff=0.9997;MQ=79.57;MQ0=0;MQRankSum=-1.606;QD=37.40;ReadPosRankSum=1.441;VQSLOD=5.8458;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,2190	0/0:14,0:14:42.14:0,42,811	0/0:33,0:33:93.31:0,93,1676	0/0:30,0:30:87.26:0,87,1568	0/0:21,0:21:63.22:0,63,1204	0/0:24,0:24:72.25:0,72,1389	0/0:35,0:35:99:0,102,1904	0/0:22,0:22:66.22:0,66,1240	0/0:35,0:35:99:0,102,1951	0/0:23,0:23:69.22:0,69,1301	0/0:17,0:17:51.16:0,51,936	0/0:25,0:25:75.24:0,75,1414	0/0:26,0:26:78.25:0,78,1471	0/0:29,0:29:84.27:0,84,1577	1/1:0,38:38:99:1516,99,0	0/0:30,0:30:87.30:0,87,1667	0/0:31,0:31:90.29:0,90,1664	0/0:20,0:20:60.21:0,60,1145	0/0:36,0:36:99:0,108,1974	0/0:24,0:24:72.25:0,72,1391	0/0:51,0:51:99:0,154,2943	0/0:20,0:20:57.20:0,57,1101	0/0:23,0:23:63.22:0,63,1191	0/0:37,0:37:99:0,111,2144	0/0:22,0:22:66.20:0,66,1240	0/0:30,0:30:90.31:0,90,1737	0/0:29,0:28:87.30:0,87,1679	0/0:11,0:11:33.08:0,33,569
chr10	103072886	.	C	CTTT	4722.25	PASS	AB=0.940;AC=28;AF=0.500;AN=56;BaseQRankSum=4.626;DP=563;FS=1.026;HRun=15;HaplotypeScore=121.6180;InbreedingCoeff=0.7365;MQ=49.42;MQ0=12;MQRankSum=-6.726;QD=15.18;ReadPosRankSum=-4.901;VQSLOD=2.0090;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,18:48:75.05:970,75,0	1/1:5,1:9:15.05:217,15,0	0/1:20,0:12:6.77:7,0,12	0/0:17,0:8:0.49:0,0,19	0/0:31,0:34:23.36:0,23,392	1/1:10,0:16:23.96:274,24,0	1/1:12,3:23:47.23:463,47,0	0/0:31,0:34:41.97:0,42,369	1/1:8,1:13:21.97:263,22,0	0/0:23,0:25:23.71:0,24,236	0/0:15,0:16:9.72:0,10,114	0/0:11,0:12:13.34:0,13,115	1/1:17,0:15:19.25:195,19,0	1/1:20,1:28:40.10:458,40,0	0/0:19,0:20:1.11:0,1,129	0/0:8,0:7:8.86:0,9,88	1/1:14,1:20:12.06:155,12,0	1/1:17,1:20:30.71:338,31,0	0/0:14,0:12:12.66:0,13,113	0/0:16,0:14:9.92:0,10,114	0/0:12,0:11:2.78:0,3,29	1/1:7,2:14:32.81:397,33,0	1/1:11,5:18:31.50:347,32,0	1/1:8,6:15:18.04:242,18,0	1/1:11,2:18:32.96:387,33,0	0/1:19,0:22:10.12:10,0,191	0/0:21,0:22:6.30:0,6,144	0/0:11,0:12:23.89:0,24,224
chr10	103072906	.	C	CT	1158.63	PASS	AB=0.870;AC=13;AF=0.241;AN=54;BaseQRankSum=-0.378;DP=523;FS=0.620;HRun=9;HaplotypeScore=75.9168;InbreedingCoeff=0.6728;MQ=41.81;MQ0=25;MQRankSum=-4.049;QD=7.06;ReadPosRankSum=-2.386;VQSLOD=1.0047;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:42:42.78:0,43,519	0/0:8,0:7:8.87:0,9,69	0/1:10,0:6:0:1,0,0	./.	0/0:33,0:31:47.92:0,48,413	0/0:13,0:12:11.96:0,12,104	0/0:26,0:21:34.33:0,34,301	1/1:20,17:32:42:425,42,0	0/0:15,0:15:23.69:0,24,207	0/0:20,0:19:23.77:0,24,201	0/0:14,0:12:8.97:0,9,78	0/0:13,3:15:2.83:0,3,161	0/0:13,0:11:14.91:0,15,130	0/0:28,0:26:37.67:0,38,333	0/1:9,16:20:1.19:111,0,1	0/0:8,0:6:8.95:0,9,78	0/0:21,0:18:22.14:0,22,205	0/1:23,0:22:6.41:6,0,181	1/1:9,9:13:21.02:214,21,0	1/1:6,11:14:3.84:240,4,0	1/1:6,2:6:3.01:33,3,0	0/0:13,0:13:17.74:0,18,156	0/0:15,0:15:11.94:0,12,101	0/0:14,0:14:11.15:0,11,124	0/0:21,0:21:16.60:0,17,175	0/0:15,0:15:20.96:0,21,182	1/1:7,18:19:27.06:289,27,0	0/0:13,0:13:29.97:0,30,258
chr10	103073579	.	T	TG	593.72	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.413;DP=672;FS=10.153;HRun=7;HaplotypeScore=63.5063;InbreedingCoeff=0.9948;MQ=94.05;MQ0=0;MQRankSum=-2.287;QD=28.27;ReadPosRankSum=0.838;VQSLOD=3.9641;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,1212	0/0:10,0:10:27.04:0,27,260	0/0:29,0:30:60.05:0,60,568	0/0:30,0:30:63.02:0,63,591	0/0:27,0:27:66.09:0,66,629	0/0:38,0:38:99:0,108,1015	0/0:22,0:22:57.04:0,57,534	0/0:21,0:21:51.06:0,51,482	0/0:24,0:24:66.09:0,66,631	0/0:21,0:21:57.05:0,57,542	0/0:24,0:24:65.93:0,66,620	0/0:24,0:24:63.07:0,63,601	0/0:15,0:15:42.04:0,42,398	0/0:22,0:22:63.07:0,63,596	1/1:1,20:21:57.17:689,57,0	0/0:27,0:27:72.09:0,72,685	0/0:26,0:26:72.11:0,72,695	0/0:21,0:21:51.07:0,51,488	0/0:26,0:26:66.09:0,66,630	0/0:26,0:26:69.11:0,69,665	0/0:24,0:24:66.10:0,66,637	0/0:21,0:21:60.08:0,60,574	0/0:19,0:19:51.08:0,51,492	0/0:38,0:38:99:0,108,1033	0/0:14,0:14:36.06:0,36,348	0/0:26,0:26:66.10:0,66,637	0/0:24,0:24:72.12:0,72,695	0/0:7,0:7:21.03:0,21,203
chr10	103073680	.	A	AT	2373.05	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-8.557;DP=578;FS=7.513;HRun=9;HaplotypeScore=56.1465;InbreedingCoeff=0.9989;MQ=83.11;MQ0=0;MQRankSum=-0.646;QD=22.60;ReadPosRankSum=-1.673;VQSLOD=3.8539;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,108,930	0/0:11,0:11:29.99:0,30,260	0/0:16,0:16:31.52:0,32,263	0/0:18,0:18:41.46:0,41,330	0/0:26,0:26:59.97:0,60,521	0/0:26,1:27:35.75:0,36,528	0/0:12,0:12:23.99:0,24,208	1/1:1,17:18:42.11:465,42,0	0/0:22,0:22:56.98:0,57,495	0/0:32,0:32:80.98:0,81,703	0/0:19,0:19:47.99:0,48,416	0/0:20,0:20:50.97:0,51,443	0/0:14,0:14:32.98:0,33,286	0/0:23,0:23:62.95:0,63,542	0/0:24,0:24:65.98:0,66,573	0/0:18,0:18:50.99:0,51,442	0/0:11,0:12:32.03:0,32,266	0/0:22,0:22:59.98:0,60,521	1/1:7,16:23:48.13:531,48,0	1/1:3,20:23:31.06:558,31,0	1/1:3,13:16:30.08:332,30,0	0/0:20,0:20:53.98:0,54,469	0/0:21,0:21:62.97:0,63,543	0/0:15,0:15:44.95:0,45,383	0/0:13,0:13:38.99:0,39,338	0/0:30,0:30:80.95:0,81,694	1/1:4,21:24:60.16:664,60,0	0/0:16,0:16:44.92:0,45,391
chr10	103074941	.	TA	T	5886.62	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=15.036;DP=643;FS=3.937;HRun=11;HaplotypeScore=87.9577;InbreedingCoeff=0.9130;MQ=63.93;MQ0=0;MQRankSum=-0.704;QD=13.59;ReadPosRankSum=-0.669;VQSLOD=4.9446;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,32:40:56.92:664,57,0	1/1:1,10:11:23.96:197,24,0	0/0:7,0:5:5.89:0,6,60	0/1:13,0:11:8.19:8,0,77	0/0:23,1:24:41.50:0,41,632	1/1:1,22:23:56.93:468,57,0	1/1:6,24:30:65.89:542,66,0	1/1:4,0:27:42.53:125,43,0	1/1:2,24:26:68.91:567,69,0	0/0:25,0:26:72.01:0,72,747	0/0:28,1:30:47.35:0,47,680	0/0:19,0:19:51.13:0,51,544	1/1:2,15:17:35.94:295,36,0	1/1:5,14:19:22.96:341,23,0	1/1:2,0:21:36.66:106,37,0	0/0:22,1:23:41.52:0,42,647	0/0:34,0:34:90.20:0,90,945	1/1:0,14:14:38.95:320,39,0	1/1:9,0:23:32.35:94,32,0	1/1:5,0:26:39.85:114,40,0	1/1:1,0:22:42.78:124,43,0	1/1:5,18:23:56.93:468,57,0	1/1:3,18:23:22.99:374,23,0	1/1:2,14:16:41.95:345,42,0	1/1:1,24:26:67.95:548,68,0	0/0:29,1:30:29.49:0,29,519	1/1:0,0:33:65.19:188,65,0	0/0:17,0:17:48.12:0,48,512
chr10	103075975	.	C	CT	1414.38	PASS	AB=0.887;AC=35;AF=0.625;AN=56;BaseQRankSum=0.815;DP=482;FS=1.871;HRun=14;HaplotypeScore=59.6733;InbreedingCoeff=0.5991;MQ=60.38;MQ0=4;MQRankSum=-3.335;QD=4.46;ReadPosRankSum=-3.446;VQSLOD=0.5791;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:30:8.96:38,9,0	1/1:2,0:4:2.84:14,3,0	0/0:16,0:14:4.92:0,5,65	0/1:11,1:10:4.77:5,0,41	0/0:17,0:20:30.84:0,31,173	1/1:10,0:15:5.68:29,6,0	1/1:20,0:23:17.04:86,17,0	1/1:16,13:30:12.06:328,12,0	1/1:9,0:14:2.84:15,3,0	0/0:14,0:14:23.53:0,24,153	0/0:8,0:9:13.81:0,14,82	0/0:21,0:21:32.28:0,32,208	1/1:8,0:12:2.84:14,3,0	1/1:11,0:12:11.76:75,12,0	1/1:5,15:20:33:290,33,0	0/0:11,0:13:12.79:0,13,69	0/0:32,0:37:78.86:0,79,481	1/1:18,0:26:7.40:33,7,0	1/1:10,9:19:13.72:237,14,0	1/1:14,2:16:0.52:108,1,0	0/1:9,5:14:22.89:64,0,23	1/1:16,0:16:4.09:18,4,0	0/1:9,0:6:0:0,0,0	1/1:12,0:11:3.31:16,3,0	1/1:7,1:11:5.84:41,6,0	0/0:20,1:24:23.57:0,24,131	1/1:5,14:18:7.73:192,8,0	0/0:9,0:10:22.66:0,23,139
chr10	103076514	.	T	TG	7502.26	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-15.900;DP=540;FS=0.699;HRun=7;HaplotypeScore=46.2971;InbreedingCoeff=0.9802;MQ=76.93;MQ0=0;MQRankSum=-1.388;QD=29.42;ReadPosRankSum=2.434;VQSLOD=5.2031;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:54.17:652,54,0	1/1:2,11:13:33.10:399,33,0	0/0:15,0:14:22.93:0,23,211	0/0:11,0:11:24.03:0,24,230	0/0:14,0:14:39.02:0,39,365	1/1:1,20:21:54.17:652,54,0	1/1:1,17:18:45.14:544,45,0	0/0:27,0:27:69.05:0,69,652	1/1:1,18:20:54.03:631,54,0	0/0:15,0:15:39.05:0,39,373	0/0:17,0:17:48.08:0,48,463	0/0:15,0:15:36.02:0,36,336	1/1:4,15:19:42.13:507,42,0	1/1:0,17:17:45.14:544,45,0	0/0:18,0:18:51.08:0,51,492	0/0:15,0:15:42.06:0,42,406	0/0:22,0:22:60.09:0,60,579	1/1:2,30:32:90.28:1087,90,0	0/0:18,0:18:33.03:0,33,315	0/0:21,0:21:54.08:0,54,520	0/0:17,0:17:44.99:0,45,416	1/1:2,20:22:48.15:578,48,0	1/1:3,10:14:4.56:278,5,0	1/1:2,24:26:63.19:761,63,0	1/1:2,27:29:72.22:870,72,0	0/0:24,0:24:69.11:0,69,666	0/0:25,0:25:72.06:0,72,681	0/0:10,0:10:30.02:0,30,282
chr10	103077138	.	A	AT	2996.77	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.259;DP=640;FS=5.638;HRun=9;HaplotypeScore=61.5974;InbreedingCoeff=0.9876;MQ=67.02;MQ0=2;MQRankSum=-0.556;QD=22.20;ReadPosRankSum=-3.583;VQSLOD=3.1086;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,1111	0/0:15,0:15:38.99:0,39,338	0/0:17,0:14:26.51:0,27,207	0/0:7,0:7:12:0,12,104	0/0:14,0:14:35.89:0,36,302	0/0:22,1:23:32.65:0,33,501	0/0:28,0:28:71.96:0,72,625	1/1:13,28:40:90.22:982,90,0	0/0:22,0:22:53.97:0,54,469	0/0:25,1:26:35.79:0,36,539	0/0:15,1:16:14.81:0,15,357	0/0:21,0:21:53.97:0,54,468	0/0:25,0:25:68.98:0,69,599	0/0:24,0:24:65.98:0,66,573	0/0:18,0:18:47.97:0,48,417	0/0:24,0:24:62.97:0,63,547	0/0:34,0:34:89.95:0,90,776	0/0:25,0:25:62.89:0,63,547	1/1:7,19:26:33.84:582,34,0	1/1:4,16:21:21.54:413,22,0	1/1:2,16:18:42.11:464,42,0	0/0:22,0:22:58.54:0,59,499	0/0:15,0:15:44.47:0,44,369	0/0:19,0:19:53.94:0,54,462	0/0:22,0:22:59.87:0,60,506	0/0:19,0:19:53.97:0,54,467	1/1:2,26:29:66.18:730,66,0	0/0:23,0:24:68.02:0,68,578
chr10	103077566	.	TCTAA	T	10126.52	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=17.030;DP=579;FS=1.078;HRun=0;HaplotypeScore=119.6919;InbreedingCoeff=0.9996;MQ=86.09;MQ0=0;MQRankSum=-5.272;QD=44.22;ReadPosRankSum=3.386;VQSLOD=5.5870;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:75.26:1424,75,0	1/1:0,12:12:27.09:512,27,0	0/0:20,0:20:51.17:0,51,1270	0/0:20,0:20:51.17:0,51,1284	0/0:25,0:25:69.24:0,69,1863	1/1:2,25:27:60.21:1139,60,0	1/1:2,14:16:33.11:622,33,0	0/0:25,0:25:72.25:0,72,1939	1/1:1,16:17:42.14:797,42,0	0/0:27,0:27:69.24:0,69,1819	0/0:23,0:23:69.24:0,69,1860	0/0:15,0:15:42.14:0,42,1132	1/1:1,14:15:36.12:683,36,0	1/1:1,14:15:33.11:626,33,0	0/0:18,0:18:51.18:0,51,1376	0/0:24,0:24:72.25:0,72,1905	0/0:29,0:29:81.28:0,81,2182	1/1:0,10:10:30.10:569,30,0	0/0:10,0:10:30.09:0,30,742	0/0:37,0:37:99:0,108,2763	0/0:16,0:16:48.12:0,48,1199	1/1:1,23:24:57.20:1081,57,0	1/1:1,21:22:50.87:966,51,0	1/1:3,19:22:51.17:968,51,0	1/1:0,16:16:39.13:740,39,0	0/0:24,0:24:66.23:0,66,1779	0/0:26,0:26:75.24:0,75,1955	0/0:11,0:11:33.08:0,33,795
chr10	103077790	.	TTTG	T	1626.68	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=6.953;DP=576;FS=5.370;HRun=0;HaplotypeScore=127.2325;InbreedingCoeff=0.4341;MQ=69.74;MQ0=0;MQRankSum=-1.423;QD=7.10;ReadPosRankSum=-4.943;VQSLOD=0.9678;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:71.83:0,72,879	0/0:10,0:10:3.25:0,3,234	0/0:12,0:12:33.06:0,33,565	0/0:14,0:14:33.92:0,34,393	0/0:31,0:31:90.20:0,90,1698	0/1:19,0:19:23.28:23,0,333	0/0:13,0:13:11.66:0,12,284	1/1:38,1:39:85.07:500,85,0	0/0:15,0:15:30.24:0,30,278	0/0:22,0:22:66.20:0,66,1252	0/0:25,0:25:72.16:0,72,1396	0/0:22,0:22:28.36:0,28,913	0/1:20,0:20:32.64:33,0,297	0/0:23,0:23:5.95:0,6,443	0/0:13,0:13:1.44:0,1,186	0/0:20,0:20:57.15:0,57,993	0/1:28,0:28:10:11,0,10	0/1:9,0:9:29.51:30,0,133	1/1:19,2:21:20.55:306,21,0	1/1:22,1:23:61.22:395,61,0	1/1:9,0:9:22.50:115,22,0	0/0:16,0:16:35.87:0,36,355	0/1:20,0:20:5.80:6,0,353	0/0:25,0:25:29.13:0,29,478	0/1:21,0:21:95.03:95,0,225	0/0:30,0:30:84.26:0,84,1621	1/1:18,2:20:42.22:298,42,0	0/0:15,0:15:45.14:0,45,873
chr10	103077791	.	TTG	T	4561.37	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=5.352;DP=567;FS=1.926;HRun=0;HaplotypeScore=104.3732;InbreedingCoeff=0.1755;MQ=69.03;MQ0=0;MQRankSum=-2.866;QD=12.92;ReadPosRankSum=-5.755;VQSLOD=3.5608;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:41:37.38:37,0,339	0/0:10,0:10:1.95:0,2,105	0/0:12,0:12:33.09:0,33,485	0/0:14,0:13:14.05:0,14,277	0/0:31,0:31:93.19:0,93,1388	0/1:19,0:19:39.78:40,0,141	0/1:13,0:13:3.88:4,0,104	1/1:5,32:37:99:1338,103,0	0/1:14,0:14:19.46:19,0,83	0/0:22,0:22:66.04:0,66,996	0/0:24,0:24:72.09:0,72,1120	0/0:21,0:21:50.91:0,51,782	0/1:20,0:20:71.57:72,0,115	0/1:24,0:24:33.23:33,0,187	0/1:13,0:13:32.43:32,0,60	0/0:19,0:19:56.84:0,57,804	1/1:25,2:27:52.73:303,53,0	0/1:9,0:9:40.82:41,0,46	1/1:10,11:21:39.82:647,40,0	1/1:1,22:23:65.91:791,66,0	1/1:0,9:9:24.08:357,24,0	0/0:17,0:17:10.90:0,11,154	0/1:18,0:18:26.93:27,0,158	0/1:25,0:25:56:56,0,179	0/1:20,0:20:81.25:156,0,81	0/0:29,0:29:84.10:0,84,1316	1/1:3,17:20:45.12:608,45,0	0/0:15,0:15:45.11:0,45,715
chr10	103077792	.	TG	T	5057.61	PASS	AB=0.947;AC=37;AF=0.661;AN=56;BaseQRankSum=7.599;DP=567;FS=2.585;HRun=1;HaplotypeScore=94.2058;InbreedingCoeff=0.8415;MQ=69.92;MQ0=0;MQRankSum=-2.180;QD=13.42;ReadPosRankSum=-4.926;VQSLOD=2.0944;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:40,1:41:25.39:290,25,0	1/1:10,0:10:2.97:28,3,0	0/0:12,0:12:33.01:0,33,377	0/0:16,0:15:24.64:0,25,240	0/0:31,0:31:93.01:0,93,1082	1/1:19,0:19:1.34:132,1,0	1/1:12,1:13:11.17:98,11,0	1/1:33,4:37:99:842,102,0	1/1:12,2:14:15.49:171,15,0	0/0:22,0:22:64.29:0,64,764	0/0:25,0:25:75.06:0,75,899	0/0:21,0:21:50.40:0,50,604	1/1:19,1:20:21.88:218,22,0	1/1:21,3:24:6.99:197,7,0	1/1:12,1:13:17.93:158,18,0	0/0:20,0:20:49.89:0,50,613	1/1:2,24:26:57.16:754,57,0	1/1:9,0:9:6.47:96,6,0	1/1:19,0:19:49.02:374,49,0	1/1:23,0:23:65.61:492,66,0	1/1:9,0:9:23.85:183,24,0	1/1:17,0:17:4.32:73,4,0	0/1:17,1:18:0.42:115,0,0	1/1:25,0:25:25.42:234,25,0	1/1:19,1:20:29.58:272,30,0	0/0:28,0:28:84.08:0,84,1036	1/1:20,0:20:44.54:330,45,0	0/0:15,0:15:45.10:0,45,560
chr10	103078218	.	G	GGGTTCC	32415.88	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-8.707;DP=586;FS=1.082;HRun=0;HaplotypeScore=107.4091;InbreedingCoeff=0.9970;MQ=80.79;MQ0=0;MQRankSum=-17.298;QD=84.42;ReadPosRankSum=-0.914;VQSLOD=5.4901;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,23:37:84.24:2867,84,0	1/1:1,3:5:15.05:489,15,0	0/0:20,0:20:39.15:0,39,1080	0/0:24,0:24:60.68:0,61,1435	0/0:29,0:29:87.28:0,87,2075	1/1:2,14:20:45.15:1610,45,0	1/1:8,15:24:72.23:2460,72,0	1/1:9,17:33:96.33:3239,96,0	1/1:2,22:29:75.26:2735,75,0	0/0:34,0:34:99:0,99,2465	0/0:19,0:19:57.20:0,57,1425	0/0:25,0:25:75.26:0,75,1895	1/1:5,18:25:63.22:2256,63,0	1/1:1,16:24:54.18:1875,54,0	1/1:3,17:21:57.20:2049,57,0	0/0:15,0:15:45.15:0,45,1125	1/1:3,13:17:33.11:1068,33,0	1/1:2,14:17:42.14:1541,42,0	1/1:1,10:15:42.14:1342,42,0	1/1:2,16:19:54.18:1653,54,0	1/1:5,14:22:48.16:1417,48,0	1/1:0,10:11:30.10:991,30,0	1/1:2,12:18:38.80:1123,39,0	1/1:0,12:14:26.07:1011,26,0	1/1:1,11:12:27.09:937,27,0	0/0:22,0:22:66.23:0,66,1642	1/1:2,14:20:51.17:1754,51,0	0/0:14,0:14:42.14:0,42,1077
chr10	103079616	.	C	CCGA	19807.23	PASS	AB=0.813;AC=38;AF=0.679;AN=56;BaseQRankSum=-1.596;DP=597;FS=0.397;HRun=0;HaplotypeScore=77.8779;InbreedingCoeff=0.8314;MQ=50.21;MQ0=22;MQRankSum=-2.296;QD=43.15;ReadPosRankSum=2.062;VQSLOD=6.2988;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:31:63.22:1448,63,0	1/1:0,6:6:18.06:423,18,0	0/0:17,0:4:6.02:0,6,80	0/1:31,0:6:4.65:5,0,113	0/0:19,0:18:33.10:0,33,582	1/1:2,18:19:51.18:1203,51,0	1/1:5,31:35:87.30:1988,87,0	1/1:8,0:21:35.29:828,35,0	1/1:2,22:25:63.21:1427,63,0	0/0:18,0:17:44.92:0,45,699	0/0:10,0:9:21.07:0,21,368	0/0:25,0:25:69.23:0,69,1191	1/1:1,19:21:48.01:1131,48,0	1/1:2,30:32:90.31:2075,90,0	1/1:5,0:26:63.17:901,63,0	0/0:16,0:15:42.14:0,42,739	1/1:2,0:27:16.28:800,16,0	1/1:2,23:25:72.25:1683,72,0	1/1:5,0:13:10.24:436,10,0	0/1:2,0:5:10.02:89,0,10	1/1:7,0:40:51.80:1004,52,0	1/1:2,6:9:12.04:282,12,0	1/1:0,11:10:17.65:424,18,0	1/1:1,38:39:96.80:2267,97,0	1/1:2,12:14:30.10:708,30,0	0/0:22,0:20:54.18:0,54,953	1/1:1,0:19:24.18:684,24,0	0/0:11,0:11:33.11:0,33,582
chr10	103079806	.	AGTGTGT	A	1198.44	PASS	AB=0.879;AC=19;AF=0.380;AN=50;BaseQRankSum=0.250;DP=545;FS=8.970;HRun=0;HaplotypeScore=100.2313;InbreedingCoeff=0.6313;MQ=61.48;MQ0=26;MQRankSum=0.658;QD=6.58;ReadPosRankSum=0.821;VQSLOD=0.9159;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,12:19:0:0,0,0	1/1:9,0:9:6.02:102,6,0	0/0:49,0:7:3.01:0,3,41	./.	0/0:17,0:17:26.59:0,27,622	1/1:9,0:9:3:29,3,0	1/1:25,0:26:15.04:262,15,0	0/0:19,0:17:15:0,15,234	1/1:9,0:23:3.01:44,3,0	0/0:25,0:24:33.02:0,33,694	0/0:6,0:6:9.03:0,9,225	0/0:16,0:15:29.80:0,30,576	0/1:23,0:22:2.61:15,0,3	./.	0/0:23,0:23:33.11:0,33,812	0/0:17,0:16:26.76:0,27,275	0/0:21,0:21:11.42:0,11,254	1/1:12,0:11:21.03:357,21,0	0/0:9,0:8:6.02:0,6,127	0/0:10,0:9:14.65:0,15,321	0/0:40,0:37:54.17:0,54,1212	./.	1/1:16,0:16:2.51:37,3,0	1/1:25,0:28:23.72:405,24,0	1/1:4,0:9:5.93:80,6,0	0/0:10,0:8:8.98:0,9,91	0/0:21,0:21:26.68:0,27,560	0/1:4,0:4:17.96:35,0,18
chr10	103079830	.	TGTGTGTGAGA	T	1248.26	PASS	AB=0.950;AC=17;AF=0.315;AN=54;BaseQRankSum=0.542;DP=397;FS=10.085;HRun=0;HaplotypeScore=92.2831;InbreedingCoeff=0.2085;MQ=47.77;MQ0=24;MQRankSum=0.185;QD=7.34;ReadPosRankSum=0.096;VQSLOD=0.8090;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:11.80:0,12,212	1/1:1,0:4:6.02:90,6,0	0/0:15,0:2:3.01:0,3,41	./.	0/0:12,0:12:0.90:0,1,627	1/1:10,0:9:1.93:31,2,0	0/1:18,0:17:34.02:243,0,34	0/0:13,0:9:17.92:0,18,252	0/1:19,0:19:31.50:31,0,69	0/0:16,0:14:33.06:0,33,821	0/0:4,0:4:9.03:0,9,225	0/1:18,0:17:5.46:5,0,815	0/1:16,0:15:2.89:14,0,3	0/1:3,14:16:0:0,0,0	0/0:22,0:22:33.08:0,33,827	0/0:13,0:12:26.76:0,27,396	0/0:18,0:18:19.73:0,20,488	0/1:15,0:13:36.50:333,0,37	0/0:7,0:5:9.03:0,9,173	0/0:7,0:6:14.98:0,15,365	0/0:34,0:31:56.75:0,57,1250	0/1:7,0:6:0:0,0,0	1/1:0,10:10:2.36:83,2,0	0/1:23,0:23:65.89:351,0,66	1/1:9,0:9:12.01:183,12,0	0/0:6,0:4:12.03:0,12,197	0/0:14,0:14:26.68:0,27,603	0/1:4,0:3:32.18:32,0,43
chr10	103079832	.	TGTGTGAGA	T	907.85	PASS	AB=1.000;AC=20;AF=0.370;AN=54;BaseQRankSum=3.738;DP=380;FS=6.626;HRun=0;HaplotypeScore=85.6263;InbreedingCoeff=0.0378;MQ=48.26;MQ0=22;MQRankSum=-1.020;QD=4.43;ReadPosRankSum=-0.306;VQSLOD=1.0672;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:11.92:0,12,178	1/1:3,0:3:6.02:96,6,0	0/0:12,0:2:2.97:0,3,20	./.	0/0:12,0:12:0.85:0,1,413	1/1:4,6:9:2.15:78,2,0	0/1:18,0:17:34.55:129,0,35	0/0:13,0:9:11.94:0,12,124	0/1:18,0:18:51.35:60,0,51	0/0:15,0:13:28.44:0,28,553	0/0:4,0:4:9.03:0,9,150	0/1:18,0:17:8.35:8,0,520	0/1:16,0:15:13.12:39,0,13	0/1:17,0:16:0:0,0,0	0/0:22,0:22:11.11:0,11,522	0/0:11,0:10:3.84:0,4,176	0/1:18,0:18:12.71:13,0,259	0/1:15,0:13:39.47:214,0,39	0/0:7,0:5:9:0,9,105	0/0:7,0:6:14.60:0,15,243	0/0:31,0:28:54.02:0,54,803	0/1:7,0:6:0:0,0,0	1/1:10,0:10:2.49:49,2,0	0/1:21,0:21:60.53:188,0,61	1/1:9,0:9:12.03:136,12,0	0/1:7,0:5:13.49:13,0,114	0/1:14,0:14:2.23:2,0,335	0/1:4,0:3:2.66:31,0,3
chr10	103079836	.	TGA	T	417.55	PASS	AB=0.978;AC=30;AF=0.600;AN=50;BaseQRankSum=3.167;DP=344;FS=1.513;HRun=0;HaplotypeScore=61.7378;InbreedingCoeff=0.0409;MQ=48.41;MQ0=19;MQRankSum=1.436;QD=1.78;ReadPosRankSum=1.550;VQSLOD=1.5984;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:11.66:0,12,82	1/1:3,0:3:2.86:24,3,0	./.	./.	1/1:11,0:11:2.96:20,3,0	1/1:10,0:9:2.90:17,3,0	0/1:16,0:15:13.96:59,0,14	0/0:11,0:8:0.47:0,0,1	0/1:17,1:18:16.14:34,0,16	0/0:16,0:14:8.89:0,9,81	./.	0/1:18,0:17:32.93:41,0,33	0/0:15,0:14:0:0,0,0	0/1:17,0:16:0:0,0,0	0/1:18,2:21:5.87:88,0,6	1/1:9,0:8:2.33:8,2,0	0/1:18,0:18:25.01:44,0,25	0/1:14,0:12:14.70:32,0,15	1/1:6,0:4:3:27,3,0	1/1:6,0:5:3.01:33,3,0	1/1:25,0:22:2.96:19,3,0	0/0:7,0:6:0:0,0,0	1/1:11,0:11:2.74:15,3,0	0/0:18,0:19:6.01:0,6,59	1/1:8,0:9:8.69:47,9,0	0/1:6,0:4:5.05:5,0,32	1/1:10,2:12:3.01:32,3,0	1/1:5,0:4:0.05:2,0,0
chr10	103080015	.	AGGGGCGGG	A	838.23	PASS	AB=1.000;AC=25;AF=0.568;AN=44;BaseQRankSum=3.182;DP=258;FS=7.905;HRun=0;HaplotypeScore=64.7604;InbreedingCoeff=0.4960;MQ=75.51;MQ0=6;MQRankSum=-3.502;QD=7.42;ReadPosRankSum=4.753;VQSLOD=0.2887;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,1:10:4.72:133,5,0	1/1:5,0:5:2.97:20,3,0	0/0:41,0:14:11.23:0,11,258	0/0:42,0:19:27.68:0,28,420	./.	1/1:11,0:11:3.01:43,3,0	1/1:7,1:9:0.75:88,1,0	0/0:6,0:6:8.93:0,9,112	1/1:5,0:5:3.01:73,3,0	0/0:6,0:6:8.98:0,9,132	./.	./.	1/1:5,2:8:4.73:56,5,0	1/1:1,1:2:6.02:156,6,0	0/0:5,0:5:3.01:0,3,40	./.	0/1:21,0:21:31.01:31,0,83	1/1:6,0:5:2.68:11,3,0	0/0:3,0:3:6.01:0,6,115	./.	./.	1/1:7,0:7:5.72:29,6,0	1/1:8,0:9:6.91:136,7,0	1/1:8,0:8:11.93:116,12,0	1/1:10,0:11:7.58:98,8,0	0/0:7,0:7:5.93:0,6,40	0/0:5,0:5:5.90:0,6,37	0/0:6,0:6:5.93:0,6,41
chr10	103080016	.	GGGGC	G	843.52	PASS	AB=1.000;AC=29;AF=0.604;AN=48;BaseQRankSum=3.223;DP=206;FS=8.095;HRun=0;HaplotypeScore=44.3961;InbreedingCoeff=0.4990;MQ=82.35;MQ0=6;MQRankSum=-3.520;QD=9.70;ReadPosRankSum=4.476;VQSLOD=0.6677;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:5.93:84,6,0	1/1:0,0:2:2.98:21,3,0	0/0:42,0:14:3.65:0,4,109	0/0:43,0:19:22.66:0,23,204	0/1:5,0:5:0:0,0,0	1/1:2,2:4:3.01:55,3,0	1/1:5,0:5:8.94:94,9,0	0/0:6,0:6:8.91:0,9,66	1/1:0,1:1:3.01:54,3,0	0/0:5,0:5:8.96:0,9,84	./.	./.	1/1:4,0:4:5.96:84,6,0	1/1:2,0:2:6.02:86,6,0	1/1:3,0:3:0.89:2,1,0	0/1:7,0:7:0:0,0,0	0/1:21,0:21:54.13:100,0,54	1/1:1,2:3:2.99:23,3,0	0/0:2,0:2:6.01:0,6,64	./.	./.	1/1:2,0:3:5.89:38,6,0	1/1:4,0:5:8.82:97,9,0	1/1:4,3:7:11.98:155,12,0	1/1:3,4:7:7.84:102,8,0	0/0:6,0:6:5.93:0,6,40	0/0:3,0:3:5.89:0,6,37	0/0:6,0:6:5.93:0,6,41
chr10	103080019	.	GC	G	414.17	PASS	AB=1.000;AC=25;AF=0.568;AN=44;BaseQRankSum=3.164;DP=191;FS=0.000;HRun=1;HaplotypeScore=36.0591;InbreedingCoeff=0.5021;MQ=84.30;MQ0=6;MQRankSum=-2.070;QD=4.71;ReadPosRankSum=2.617;VQSLOD=0.4068;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:4:5.99:50,6,0	1/1:2,0:2:3:25,3,0	0/0:40,1:13:1.41:0,1,57	0/1:43,0:19:15.66:16,0,91	./.	1/1:3,1:4:3:26,3,0	1/1:5,0:5:8.98:72,9,0	0/0:5,0:5:8.93:0,9,66	1/1:1,0:1:3:25,3,0	0/0:3,0:3:8.96:0,9,71	./.	./.	1/1:4,0:4:5.70:31,6,0	1/1:1,1:2:5.92:42,6,0	0/0:3,0:3:1.82:0,2,5	./.	0/0:20,0:20:25:0,25,125	1/1:3,0:2:3:26,3,0	0/0:2,0:2:5.96:0,6,45	./.	./.	1/1:3,0:3:5.93:42,6,0	1/1:4,1:5:8.87:66,9,0	1/1:6,0:6:11.95:95,12,0	1/1:5,1:6:6:51,6,0	0/0:6,0:6:5.93:0,6,39	0/0:2,0:2:5.90:0,6,36	0/0:6,0:6:5.93:0,6,40
chr10	103080652	.	TA	T	1060.43	PASS	AB=0.817;AC=21;AF=0.375;AN=56;BaseQRankSum=5.254;DP=499;FS=8.793;HRun=15;HaplotypeScore=60.7046;InbreedingCoeff=0.0544;MQ=79.06;MQ0=3;MQRankSum=0.197;QD=3.53;ReadPosRankSum=1.175;VQSLOD=-0.2331;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,2:35:62.14:0,62,615	0/1:6,0:7:10.36:10,0,65	0/0:23,0:16:11.29:0,11,117	0/0:21,0:18:28.24:0,28,161	0/1:9,3:13:11.22:11,0,146	0/0:14,1:15:11.99:0,12,103	0/1:22,3:26:10.02:10,0,180	1/1:9,18:27:6.32:287,6,0	0/0:11,1:14:13.38:0,13,212	0/1:16,4:20:38.01:38,0,179	0/1:9,5:14:31.95:32,0,138	0/0:12,0:12:14.98:0,15,126	0/0:13,0:13:20.95:0,21,171	0/0:13,0:14:11.99:0,12,101	0/1:4,7:12:6.57:82,0,7	0/0:15,2:17:22.70:0,23,315	0/1:18,4:23:18.51:19,0,210	0/1:9,3:12:24.81:25,0,178	0/1:10,7:17:23.13:102,0,23	1/1:6,13:21:36.38:223,36,0	1/1:5,11:20:34.66:194,35,0	0/0:9,0:11:20.80:0,21,162	0/1:10,1:13:2.28:2,0,120	0/0:20,4:24:9.38:0,9,314	0/1:16,2:18:5.65:6,0,192	0/1:24,2:26:4.23:4,0,206	1/1:9,10:20:28.44:179,28,0	0/1:9,2:11:11.81:12,0,139
chr10	103082788	.	CTT	C	3522.47	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=3.952;DP=479;FS=5.311;HRun=13;HaplotypeScore=78.5794;InbreedingCoeff=0.9663;MQ=73.10;MQ0=5;MQRankSum=-6.049;QD=19.46;ReadPosRankSum=0.649;VQSLOD=3.1230;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,19:28:53.89:570,54,0	1/1:4,4:8:12.01:116,12,0	0/0:53,0:21:16.49:0,16,308	0/0:42,0:19:21.74:0,22,151	0/0:14,0:15:33:0,33,378	1/1:6,6:13:17.94:224,18,0	1/1:6,9:15:36:337,36,0	0/0:19,0:19:38.91:0,39,458	1/1:5,8:13:28.19:255,28,0	0/0:13,0:14:33.81:0,34,390	0/0:14,0:17:45.09:0,45,590	0/0:14,0:16:44.30:0,44,565	1/1:5,5:10:21.01:201,21,0	1/1:3,9:12:33.02:318,33,0	0/0:10,0:11:22.93:0,23,274	0/0:13,0:13:35.83:0,36,434	0/0:29,0:29:74.50:0,74,931	1/1:7,5:11:17.99:174,18,0	0/0:11,0:14:32.58:0,33,393	0/0:12,0:13:20.41:0,20,220	0/0:5,0:6:6.02:0,6,84	1/1:8,10:18:32.97:363,33,0	1/1:10,6:17:31.49:286,31,0	1/1:11,7:18:28.24:270,28,0	1/1:3,13:16:42.06:407,42,0	0/0:12,0:12:24.07:0,24,330	0/0:17,0:16:33.87:0,34,358	0/0:4,0:4:9.03:0,9,130
chr10	103082800	.	TTC	T	866.19	PASS	AB=0.973;AC=18;AF=0.321;AN=56;BaseQRankSum=7.504;DP=496;FS=2.323;HRun=0;HaplotypeScore=91.0153;InbreedingCoeff=0.2816;MQ=68.03;MQ0=8;MQRankSum=-5.605;QD=4.81;ReadPosRankSum=3.141;VQSLOD=2.3497;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:95.28:122,0,95	1/1:5,0:5:9.38:40,9,0	0/0:67,0:19:21.34:0,21,317	0/0:54,0:19:25.06:0,25,199	0/0:15,0:15:31.94:0,32,329	0/1:14,0:14:47.74:48,0,95	1/1:13,0:13:8.81:101,9,0	0/0:16,0:15:2.46:0,2,335	0/1:15,1:16:69.02:69,0,69	0/0:15,0:15:16.68:0,17,431	0/0:16,0:16:45.06:0,45,604	0/0:18,0:18:52.76:0,53,551	0/1:9,0:9:26.01:83,0,26	1/1:11,0:11:28.66:118,29,0	0/0:10,0:10:7.20:0,7,218	0/0:16,0:16:31.80:0,32,489	0/0:32,0:32:90.04:0,90,1035	0/1:11,0:10:20.84:21,0,57	0/0:18,0:17:18.30:0,18,323	0/1:12,0:12:0.48:0,0,174	0/0:6,0:6:8.85:0,9,78	1/1:17,0:17:10.61:107,11,0	0/1:14,0:14:21.03:56,0,21	0/1:13,3:15:14.02:124,0,14	1/1:14,0:14:34.63:156,35,0	0/0:10,0:10:27.07:0,27,353	0/0:19,0:16:3.79:0,4,271	0/0:4,0:4:9.01:0,9,114
chr10	103082809	.	TC	T	2841.19	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=4.638;DP=467;FS=0.484;HRun=9;HaplotypeScore=80.9858;InbreedingCoeff=0.7977;MQ=73.09;MQ0=9;MQRankSum=-5.724;QD=12.91;ReadPosRankSum=3.053;VQSLOD=3.5276;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,17:25:50.45:457,50,0	1/1:6,0:6:5.99:55,6,0	0/0:70,1:25:31.15:0,31,281	0/0:59,0:22:8.56:0,9,95	0/0:6,0:10:19.85:0,20,116	1/1:1,13:14:42.02:381,42,0	1/1:3,12:15:26.12:244,26,0	1/1:13,0:12:1.26:4,1,0	1/1:4,13:17:46.45:392,46,0	0/0:11,0:11:24.05:0,24,263	0/0:9,0:9:20.62:0,21,197	0/0:16,0:16:33.51:0,34,341	1/1:5,4:9:14.97:130,15,0	1/1:7,4:11:17.69:142,18,0	1/1:9,0:9:3.47:10,3,0	0/0:14,0:14:41.48:0,41,442	0/0:29,0:29:79.20:0,79,843	1/1:2,9:11:21.01:191,21,0	0/0:15,0:14:0.29:0,0,35	1/1:11,0:11:3.55:9,4,0	1/1:4,0:4:1.55:4,2,0	1/1:5,13:18:33.01:301,33,0	1/1:3,9:12:25.57:222,26,0	1/1:4,11:15:28.30:239,28,0	1/1:6,9:15:29.03:250,29,0	0/0:10,0:10:21.04:0,21,220	1/1:15,0:12:3.50:11,3,0	0/0:2,0:2:2.92:0,3,18
chr10	103082816	.	CCCA	C	922.14	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=-1.052;DP=474;FS=0.000;HRun=0;HaplotypeScore=96.2287;InbreedingCoeff=0.7072;MQ=74.19;MQ0=9;MQRankSum=0.099;QD=5.04;ReadPosRankSum=-5.639;VQSLOD=0.0378;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:28.18:0,28,312	0/0:7,0:7:8.52:0,9,56	0/1:62,0:25:1.86:2,0,417	0/1:55,0:17:2.77:3,0,153	0/0:9,0:9:3.28:0,3,227	0/0:15,0:15:34.14:0,34,271	0/0:19,0:19:17.82:0,18,305	1/1:8,1:8:14.95:141,15,0	0/0:17,0:17:45.75:0,46,308	0/0:12,0:12:26.27:0,26,412	0/0:11,0:11:17.95:0,18,256	0/0:16,0:16:38.69:0,39,513	0/0:10,0:10:14.99:0,15,139	0/0:12,0:12:30.95:0,31,259	1/1:9,0:9:25.48:218,25,0	0/0:16,0:16:48.07:0,48,708	0/0:33,0:33:78.62:0,79,1472	0/0:11,0:11:9.36:0,9,142	1/1:12,0:11:1.85:156,2,0	1/1:13,0:13:29.77:247,30,0	1/1:1,7:8:3.01:47,3,0	0/0:17,0:17:32.41:0,32,217	0/0:13,0:13:22.01:0,22,163	0/0:20,0:19:34.18:0,34,244	0/0:14,0:14:19.02:0,19,146	0/0:13,0:13:30.02:0,30,427	1/1:11,3:11:26.85:277,27,0	0/0:2,0:2:2.99:0,3,31
chr10	103082818	.	CA	C	1860.80	PASS	AB=0.964;AC=36;AF=0.643;AN=56;BaseQRankSum=8.838;DP=459;FS=3.934;HRun=1;HaplotypeScore=77.7714;InbreedingCoeff=0.1617;MQ=78.82;MQ0=8;MQRankSum=-5.410;QD=4.68;ReadPosRankSum=1.984;VQSLOD=0.7296;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,2:21:26.07:186,26,0	0/1:6,0:6:6.95:7,0,18	0/1:63,0:29:7.11:7,0,299	0/1:47,5:17:16.46:16,0,92	0/0:10,0:10:4.53:0,5,110	1/1:16,0:16:3.18:72,3,0	0/1:18,0:18:65.73:66,0,83	1/1:9,0:8:14.92:115,15,0	1/1:17,0:17:36.50:180,37,0	0/0:11,0:11:22.23:0,22,254	0/0:10,0:10:1.91:0,2,124	0/1:15,0:15:2.58:3,0,194	0/1:9,0:9:38.33:38,0,50	0/1:9,3:12:44.98:73,0,45	1/1:8,1:9:25.40:186,25,0	0/0:16,0:16:29.69:0,30,384	0/1:32,1:33:4.88:5,0,715	0/1:12,0:12:17.40:51,0,17	1/1:9,2:10:24.54:165,25,0	1/1:1,12:13:29.70:205,30,0	1/1:8,0:8:2.98:21,3,0	1/1:13,0:13:22.30:117,22,0	1/1:12,0:12:0.63:81,1,0	0/1:20,1:20:75.83:108,0,76	1/1:12,1:13:25.27:130,25,0	0/0:14,0:14:29.17:0,29,280	1/1:13,0:10:26.80:195,27,0	1/1:1,0:1:2.37:8,2,0
chr10	103083143	.	G	GA	3846.82	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=0.877;DP=615;FS=15.863;HRun=8;HaplotypeScore=63.2144;InbreedingCoeff=0.9919;MQ=77.94;MQ0=0;MQRankSum=0.925;QD=29.14;ReadPosRankSum=-2.491;VQSLOD=1.7625;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:60.01:0,60,549	0/0:6,0:6:12:0,12,110	0/0:17,0:17:25.66:0,26,240	0/0:17,0:17:32.90:0,33,277	0/0:24,0:24:66.03:0,66,604	0/0:28,0:28:81.04:0,81,741	0/0:21,0:21:48.02:0,48,439	1/1:8,29:37:87.23:983,87,0	0/0:26,0:26:63.01:0,63,577	0/0:26,0:27:62.06:0,62,553	0/0:17,0:17:42.01:0,42,384	0/0:19,0:19:45.01:0,45,412	0/0:20,0:20:51.02:0,51,467	0/0:19,0:19:45.02:0,45,412	0/0:22,0:22:63.03:0,63,577	0/0:29,0:29:75.03:0,75,686	0/0:27,0:27:78.04:0,78,714	0/0:21,0:20:60:0,60,541	1/1:1,13:14:39.09:435,39,0	1/1:2,26:28:75.18:849,75,0	1/1:2,14:16:42.12:485,42,0	0/0:25,0:25:69.02:0,69,627	0/0:18,0:18:42.02:0,42,384	0/0:28,0:28:69.03:0,69,631	0/0:10,0:10:27.01:0,27,247	0/0:28,0:28:81.02:0,81,734	1/1:5,32:36:96.26:1095,96,0	0/0:9,0:9:27.01:0,27,247
chr10	103083780	.	T	TAC	1814.89	PASS	AB=0.721;AC=31;AF=0.596;AN=52;BaseQRankSum=-0.408;DP=606;FS=15.389;HRun=0;HaplotypeScore=104.9898;InbreedingCoeff=0.2776;MQ=56.88;MQ0=7;MQRankSum=0.875;QD=4.38;ReadPosRankSum=1.900;VQSLOD=1.4714;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:26.93:35,0,27	1/1:6,0:6:3.35:42,3,0	./.	./.	0/0:27,0:27:20.65:0,21,183	1/1:25,0:25:6.02:89,6,0	0/1:15,11:26:90.66:156,0,91	1/1:16,0:16:9.37:83,9,0	0/1:13,6:20:26.90:39,0,27	0/0:28,0:28:23.89:0,24,216	0/0:18,0:19:14.87:0,15,145	0/0:14,0:15:8.85:0,9,80	1/1:8,5:15:3.01:45,3,0	1/1:5,8:13:2.66:45,3,0	0/1:7,7:15:20.17:203,0,20	0/0:16,0:17:15.01:0,15,162	1/1:13,1:32:18:160,18,0	0/1:8,8:19:17.90:165,0,18	1/1:12,0:12:9.20:61,9,0	1/1:26,0:26:2.70:24,3,0	1/1:45,0:40:15.43:162,15,0	1/1:18,8:26:5.47:88,5,0	1/1:9,10:19:6.02:87,6,0	0/1:24,18:42:49.94:282,0,50	0/1:10,13:23:2.06:121,0,2	0/0:22,0:22:8.97:0,9,99	1/1:10,0:10:9.49:103,9,0	0/0:18,0:18:18.04:0,18,194
chr10	103084091	.	C	CACATACAT	4544	PASS	AB=0.820;AC=29;AF=0.558;AN=52;BaseQRankSum=3.787;DP=907;FS=0.425;HRun=0;HaplotypeScore=228.8257;InbreedingCoeff=0.4788;MQ=62.28;MQ0=3;MQRankSum=-8.585;QD=7.59;ReadPosRankSum=-2.533;VQSLOD=2.9941;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,11:48:32.81:174,0,33	1/1:6,8:14:11.99:284,12,0	./.	./.	0/0:29,0:29:42.07:0,42,827	1/1:13,15:31:15.05:386,15,0	1/1:12,15:33:3.01:53,3,0	0/1:32,0:31:4.59:124,0,5	0/1:17,21:40:47.89:636,0,48	1/1:21,0:44:42.86:566,43,0	0/1:7,0:18:51.05:140,0,51	0/0:27,0:27:51.17:0,51,1139	1/1:11,14:28:12.04:420,12,0	1/1:12,16:31:24.07:525,24,0	1/1:55,0:55:15.22:218,15,0	0/0:50,0:51:99:0,99,2056	0/0:24,0:24:48.04:0,48,1030	1/1:9,5:20:6:146,6,0	0/1:10,0:10:0.02:0,0,23	0/0:30,0:30:1.08:0,1,602	0/1:65,0:64:5.82:6,0,1451	1/1:41,0:41:53.09:409,53,0	1/1:5,9:17:6.01:106,6,0	0/1:23,8:34:0:0,0,0	1/1:16,19:38:20.95:351,21,0	0/0:35,0:38:50.26:0,50,1622	0/0:43,0:43:69.73:0,70,1424	0/0:20,0:22:38.24:0,38,804
chr10	103084126	.	ATACT	A	1369.67	PASS	AB=0.968;AC=12;AF=0.214;AN=56;BaseQRankSum=4.414;DP=894;FS=4.342;HRun=0;HaplotypeScore=173.4859;InbreedingCoeff=-0.0894;MQ=54.85;MQ0=9;MQRankSum=-6.783;QD=3.62;ReadPosRankSum=-8.658;VQSLOD=0.1209;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:25.50:0,25,538	0/1:12,0:12:17.59:18,0,189	0/0:21,0:8:2.38:0,2,83	0/0:14,0:9:10.28:0,10,153	0/0:33,0:33:83.24:0,83,1251	0/1:25,0:25:14.08:14,0,324	0/0:40,0:40:23.57:0,24,502	1/1:42,0:40:12.50:509,12,0	0/0:38,0:38:1.01:0,1,598	0/0:38,0:38:30.37:0,30,1491	0/0:19,0:19:40.82:0,41,591	0/0:30,0:30:84.18:0,84,1644	0/0:27,0:27:23.85:0,24,361	0/1:30,0:30:27.69:28,0,410	0/1:35,23:58:99:165,0,720	0/0:46,0:46:99:0,114,2872	0/0:24,0:25:72.02:0,72,1325	0/0:23,0:22:32.19:0,32,307	0/1:11,0:8:8.70:106,0,9	0/1:28,1:29:99:227,0,458	0/1:53,0:53:99:134,0,1207	0/1:33,0:33:99:164,0,569	0/0:23,0:23:11.39:0,11,366	0/0:32,0:32:47.81:0,48,424	0/1:44,0:44:31.14:31,0,585	0/0:44,0:43:74.78:0,75,2161	0/1:41,0:41:99:127,0,1173	0/0:20,0:19:15.05:0,15,934
chr10	103085136	.	A	AAC	27680.94	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-18.142;DP=766;FS=0.883;HRun=0;HaplotypeScore=75.9364;InbreedingCoeff=1.0000;MQ=88.38;MQ0=1;MQRankSum=-3.940;QD=55.47;ReadPosRankSum=2.740;VQSLOD=5.4586;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,49:49:99:2680,132,0	1/1:0,13:13:39.13:792,39,0	0/0:31,0:31:93.09:0,93,1446	0/0:23,0:23:40.61:0,41,878	0/0:24,0:24:69.21:0,69,1099	1/1:1,18:20:57.19:1133,57,0	1/1:3,27:31:87.30:1700,87,0	1/1:2,33:37:99:2114,111,0	1/1:0,31:31:93.32:1889,93,0	0/0:28,0:28:78.27:0,78,1266	0/0:21,0:21:60.20:0,60,979	0/0:31,0:31:93.32:0,93,1513	1/1:2,19:21:57.20:1157,57,0	1/1:2,25:28:75.26:1500,75,0	0/0:26,0:26:78.27:0,78,1271	0/0:34,0:34:99:0,102,1637	1/1:0,20:22:48.16:975,48,0	1/1:1,20:21:51.18:1027,51,0	1/1:0,24:25:75.25:1488,75,0	1/1:0,29:29:87.30:1767,87,0	1/1:1,38:40:99:2316,114,0	1/1:0,27:28:78.15:1584,78,0	1/1:0,19:19:51.18:1036,51,0	1/1:1,38:40:99:2011,99,0	1/1:2,16:18:54.18:1048,54,0	0/0:28,0:28:84.29:0,84,1369	1/1:0,27:26:72.25:1462,72,0	0/0:21,0:21:63.22:0,63,1027
chr10	103086119	.	CGG	C	2465.17	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.900;DP=448;FS=0.977;HRun=10;HaplotypeScore=68.1636;InbreedingCoeff=0.9350;MQ=72.34;MQ0=0;MQRankSum=1.397;QD=22.62;ReadPosRankSum=4.431;VQSLOD=3.0055;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:42.09:0,42,575	0/0:5,0:5:9.02:0,9,120	0/0:14,0:15:18.91:0,19,202	0/0:10,0:7:8.76:0,9,90	0/0:12,0:13:29.59:0,30,437	0/0:15,0:15:33.10:0,33,499	0/0:18,0:20:53.12:0,53,707	1/1:6,11:17:32.84:354,33,0	0/0:14,0:15:38.62:0,39,575	0/0:11,0:12:26.58:0,27,390	0/0:5,0:5:12.04:0,12,190	0/0:17,0:17:48.13:0,48,708	0/0:11,0:11:21.07:0,21,332	0/0:18,0:18:45.13:0,45,660	0/0:3,1:19:5.51:0,6,121	0/0:10,0:13:32.59:0,33,454	0/0:9,0:19:18.02:0,18,168	0/0:19,0:20:41.61:0,42,579	1/1:3,14:17:42.04:457,42,0	1/1:2,13:15:39.09:425,39,0	1/1:4,42:46:96.18:1069,96,0	0/0:12,0:12:27.04:0,27,376	0/0:15,0:17:42.50:0,43,603	0/0:17,0:17:45.15:0,45,707	0/0:13,0:14:32.60:0,33,467	0/0:14,0:14:24.08:0,24,381	1/1:2,12:14:30.05:334,30,0	0/0:11,0:11:33.06:0,33,436
chr10	103086897	.	GAA	G	6548.91	PASS	AB=0.567;AC=25;AF=0.446;AN=56;BaseQRankSum=3.332;DP=615;FS=6.411;HRun=12;HaplotypeScore=83.8092;InbreedingCoeff=0.9453;MQ=72.86;MQ0=2;MQRankSum=-2.028;QD=21.26;ReadPosRankSum=8.635;VQSLOD=3.7128;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,31:39:43.48:732,43,0	1/1:0,11:11:29.99:291,30,0	0/0:17,0:18:31.65:0,32,406	0/0:15,0:15:15.99:0,16,254	0/0:21,0:21:53.63:0,54,694	1/1:6,25:30:58.83:608,59,0	1/1:1,21:22:57.12:577,57,0	0/0:12,0:27:42.48:0,42,344	1/1:2,21:24:41.78:543,42,0	0/0:20,0:22:47.61:0,48,603	0/0:17,0:17:42.13:0,42,598	0/0:25,0:25:69.19:0,69,951	0/1:4,13:17:2.57:323,0,3	1/1:6,15:21:20.14:401,20,0	0/0:4,0:17:36.02:0,36,330	0/0:17,0:17:51.15:0,51,724	1/1:5,27:32:68.85:671,69,0	1/1:5,23:30:68.59:664,69,0	0/0:11,0:23:51.11:0,51,506	0/0:6,0:16:38.93:0,39,376	0/0:1,0:15:27.02:0,27,252	1/1:4,19:23:51.08:517,51,0	1/1:3,11:14:10.88:283,11,0	1/1:3,18:21:42.72:480,43,0	1/1:3,19:22:45.07:458,45,0	0/0:23,0:26:61.84:0,62,767	0/0:3,0:22:36.03:0,36,336	0/0:21,0:24:71.17:0,71,917
chr10	103087093	.	GAAAAAAA	G	9270.68	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=9.602;DP=556;FS=0.373;HRun=16;HaplotypeScore=141.4510;InbreedingCoeff=0.9961;MQ=69.71;MQ0=3;MQRankSum=-14.796;QD=37.99;ReadPosRankSum=9.688;VQSLOD=2.1398;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:48.11:980,48,0	1/1:0,10:10:27.09:552,27,0	0/0:33,0:16:14.94:0,15,267	0/0:18,0:16:29.89:0,30,438	0/0:21,0:22:49.18:0,49,1458	1/1:2,12:14:20.91:429,21,0	1/1:1,21:22:45.14:919,45,0	0/0:20,0:23:51.18:0,51,1499	1/1:2,12:14:30.03:613,30,0	0/0:27,0:27:63.21:0,63,1675	0/0:14,0:14:33.10:0,33,816	0/0:16,0:16:45.15:0,45,1389	1/1:2,14:16:32.68:674,33,0	1/1:1,15:16:35.86:691,36,0	0/0:4,0:13:30.10:0,30,718	0/0:11,0:14:39.13:0,39,1306	1/1:3,27:31:57.11:1165,57,0	1/1:2,22:24:42.11:858,42,0	0/0:22,0:26:66.17:0,66,1698	0/0:16,0:17:48.16:0,48,1396	0/0:16,0:16:45.14:0,45,1330	1/1:2,14:16:35.83:645,36,0	1/1:3,10:13:24.01:479,24,0	1/1:6,15:21:23.93:490,24,0	1/1:1,17:19:39.11:776,39,0	0/0:25,0:28:78.27:0,78,2095	0/0:29,0:32:87.30:0,87,2380	0/0:7,0:11:33.11:0,33,890
chr10	103087496	.	CCTCT	C	1790.59	PASS	AB=0.955;AC=24;AF=0.462;AN=52;BaseQRankSum=1.684;DP=545;FS=15.159;HRun=0;HaplotypeScore=110.8524;InbreedingCoeff=0.6404;MQ=73.14;MQ0=27;MQRankSum=-1.407;QD=9.04;ReadPosRankSum=1.266;VQSLOD=2.0383;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:4,1:5:2.80:46,3,0	./.	0/0:56,0:30:2.74:0,3,12	0/0:20,0:20:17.79:0,18,281	1/1:6,2:12:17.83:193,18,0	1/1:11,5:14:9.03:139,9,0	0/0:32,0:32:6.49:0,6,86	1/1:12,2:17:19.60:238,20,0	0/0:11,0:11:8.82:0,9,153	0/0:12,0:11:3.01:0,3,70	0/0:9,0:10:14.73:0,15,189	1/1:4,5:11:12.02:149,12,0	1/1:11,2:13:19.92:225,20,0	0/0:24,0:24:3.76:0,4,17	0/0:22,0:22:35.55:0,36,578	0/0:7,0:9:9.02:0,9,121	1/1:10,8:18:15.13:263,15,0	0/0:23,0:22:17.34:0,17,240	0/0:13,0:12:6.02:0,6,105	0/0:24,0:25:13.24:0,13,144	1/1:13,3:17:8.85:140,9,0	1/1:12,3:15:9.03:139,9,0	1/1:13,6:18:12.04:186,12,0	1/1:9,3:12:9.08:157,9,0	0/1:19,0:19:26.70:27,0,246	0/0:19,0:20:20.80:0,21,276	0/1:22,1:21:77.63:78,0,129
chr10	103088325	.	A	AT	2512.14	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-8.760;DP=564;FS=4.815;HRun=8;HaplotypeScore=55.2417;InbreedingCoeff=0.9947;MQ=79.82;MQ0=0;MQRankSum=-1.019;QD=22.43;ReadPosRankSum=-1.454;VQSLOD=3.5246;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,954	0/0:9,0:9:24.01:0,24,220	0/0:16,0:16:35.96:0,36,317	0/0:12,0:13:31.52:0,32,254	0/0:10,0:10:26.98:0,27,241	0/0:21,0:21:48.02:0,48,439	0/0:25,0:25:60.01:0,60,545	1/1:12,27:39:78.22:890,78,0	0/0:16,0:16:42.02:0,42,384	0/0:18,0:18:45.01:0,45,409	0/0:11,0:11:33.01:0,33,299	0/0:21,0:21:51.02:0,51,467	0/0:33,0:33:90.02:0,90,819	0/0:23,0:23:47.98:0,48,439	0/0:21,0:21:54.02:0,54,494	0/0:27,0:27:72.01:0,72,653	0/0:26,0:26:72.02:0,72,654	0/0:17,0:17:50.99:0,51,459	1/1:5,11:16:36.07:388,36,0	1/1:1,9:12:32.76:340,33,0	1/1:5,20:25:23.67:516,24,0	0/0:15,0:15:45:0,45,401	0/0:11,0:11:33.02:0,33,302	0/0:37,0:37:99:0,105,952	0/0:20,0:20:59.78:0,60,533	0/0:21,0:21:56.90:0,57,499	1/1:3,17:20:48.14:554,48,0	0/0:5,0:5:15.01:0,15,137
chr10	103089550	.	A	ACC	2029.21	PASS	AB=0.616;AC=31;AF=0.554;AN=56;BaseQRankSum=3.105;DP=492;FS=11.660;HRun=9;HaplotypeScore=78.7134;InbreedingCoeff=0.6000;MQ=76.22;MQ0=2;MQRankSum=-3.151;QD=6.79;ReadPosRankSum=-0.341;VQSLOD=-0.4415;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,11:24:17.54:227,18,0	1/1:4,3:7:5.99:67,6,0	0/0:38,0:31:45.08:0,45,417	0/0:28,0:24:7.41:0,7,327	0/0:13,0:13:30:0,30,305	1/1:5,9:13:3.01:46,3,0	1/1:7,7:18:22.02:205,22,0	1/1:8,0:18:22.33:77,22,0	1/1:4,10:15:14.54:193,15,0	0/0:21,0:21:48.54:0,49,491	0/0:12,0:12:27:0,27,273	0/0:22,0:22:42.02:0,42,431	1/1:2,11:13:12.04:185,12,0	1/1:1,12:13:9.03:137,9,0	0/0:12,0:12:36.08:0,36,377	0/0:18,0:18:48.09:0,48,495	1/1:2,0:38:64.88:222,65,0	1/1:3,13:18:17.02:181,17,0	0/1:5,0:16:7.42:48,0,7	0/1:7,0:14:23.42:40,0,23	0/1:5,0:19:11.18:33,0,11	1/1:4,10:15:17.95:275,18,0	1/1:5,2:7:2.81:46,3,0	1/1:6,13:20:10.90:183,11,0	0/1:6,10:16:9.04:68,0,9	0/0:20,0:20:51.02:0,51,520	0/1:5,0:12:0.11:0,0,55	0/0:7,0:7:15.02:0,15,160
chr10	103089691	.	GGTGTGT	G	5919.67	PASS	AB=0.700;AC=31;AF=0.554;AN=56;BaseQRankSum=6.792;DP=526;FS=8.027;HRun=0;HaplotypeScore=165.6451;InbreedingCoeff=0.6910;MQ=54.06;MQ0=2;MQRankSum=-6.881;QD=18.27;ReadPosRankSum=-0.028;VQSLOD=3.8824;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:23:12.04:223,12,0	1/1:1,5:6:12.04:232,12,0	0/0:22,0:9:15.05:0,15,273	0/0:22,0:11:13.04:0,13,354	0/0:26,0:28:63.20:0,63,1783	1/1:0,18:17:18.05:334,18,0	1/1:16,12:28:22.26:530,22,0	0/1:7,0:16:1.41:1,0,14	1/1:6,6:12:27.08:486,27,0	0/0:21,0:21:51.16:0,51,1507	0/0:15,0:16:42.11:0,42,1090	0/0:20,0:25:54.15:0,54,1306	1/1:4,8:12:30.10:642,30,0	1/1:7,13:19:33.11:685,33,0	0/0:6,0:14:12.67:0,13,233	0/0:13,0:16:39.13:0,39,1093	1/1:19,15:33:57.08:1034,57,0	1/1:12,4:16:2.93:505,3,0	0/1:14,1:18:46.17:46,0,77	0/1:7,1:15:57.06:57,0,57	1/1:6,0:32:1.04:4,1,0	1/1:5,9:14:12.04:245,12,0	1/1:3,15:18:3.01:65,3,0	1/1:13,7:20:23.84:487,24,0	1/1:8,13:21:22.99:343,23,0	0/0:24,0:25:61.08:0,61,1789	0/0:5,0:6:2.30:0,2,28	0/0:7,0:7:21.07:0,21,688
chr10	103089705	.	T	TGC	1464.09	PASS	AB=0.940;AC=17;AF=0.304;AN=56;BaseQRankSum=5.613;DP=562;FS=22.621;HRun=0;HaplotypeScore=165.1110;InbreedingCoeff=0.2644;MQ=46.86;MQ0=6;MQRankSum=-2.850;QD=5.23;ReadPosRankSum=-0.661;VQSLOD=1.2726;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:31:9.67:12,0,10	0/1:11,0:11:8.62:38,0,9	0/0:20,0:6:15.02:0,15,178	0/0:22,0:8:9.74:0,10,178	0/0:29,0:29:72.08:0,72,908	0/1:18,0:17:0.26:0,0,50	1/1:23,4:27:17.48:263,17,0	0/0:16,0:15:38.47:0,38,254	1/1:18,0:18:10.93:161,11,0	0/0:24,0:23:66.01:0,66,847	0/0:15,0:15:45.04:0,45,551	0/0:25,0:25:60.51:0,61,739	0/1:16,2:18:18.90:147,0,19	0/1:24,1:24:6.13:232,0,6	0/0:13,0:13:31.77:0,32,210	0/0:15,0:15:45.02:0,45,566	1/1:28,2:30:17.53:295,18,0	0/1:15,4:19:38.05:174,0,38	0/0:14,0:13:5.10:0,5,194	0/0:13,0:13:7.98:0,8,143	0/0:34,0:33:8.83:0,9,57	0/1:16,0:16:2.08:42,0,2	1/1:18,0:18:3.01:33,3,0	0/1:18,4:22:28.75:138,0,29	0/1:22,0:22:15.95:99,0,16	0/0:27,0:26:75.16:0,75,988	0/0:3,0:3:5.93:0,6,56	0/0:12,0:12:36:0,36,413
chr10	103089723	.	TGCGTGTGTGTGTGC	T	3886.59	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=11.152;DP=540;FS=2.341;HRun=0;HaplotypeScore=218.5123;InbreedingCoeff=0.8209;MQ=43.51;MQ0=9;MQRankSum=-8.708;QD=10.80;ReadPosRankSum=0.600;VQSLOD=2.1153;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:40:9.23:100,9,0	1/1:12,0:12:6.02:112,6,0	0/0:11,0:3:2.97:0,3,20	0/0:13,0:3:3.01:0,3,83	0/0:26,0:26:59.99:0,60,2313	1/1:19,0:18:18.04:259,18,0	1/1:23,0:23:25.93:217,26,0	1/1:15,0:14:12.04:161,12,0	1/1:23,0:22:15.05:199,15,0	0/0:20,0:19:42.14:0,42,1756	0/0:13,0:13:39.13:0,39,1730	0/0:22,0:22:47.64:0,48,1671	1/1:18,0:17:23.98:378,24,0	1/1:25,0:23:15.03:220,15,0	0/0:12,0:12:21.07:0,21,672	0/0:20,0:20:57.18:0,57,2289	1/1:23,5:28:38.14:942,38,0	1/1:19,0:18:15:174,15,0	1/1:9,0:8:15.46:165,15,0	1/1:14,0:14:15.01:249,15,0	1/1:32,0:31:7.05:72,7,0	1/1:16,0:16:3.48:60,3,0	1/1:15,0:15:2.68:11,3,0	1/1:29,0:27:23.34:339,23,0	1/1:18,0:18:8.35:131,8,0	0/0:29,0:28:72.12:0,72,2322	1/1:4,0:2:5.98:95,6,0	0/0:13,0:13:36.11:0,36,1873
chr10	103089727	.	TGTGTGTGTGCGC	T	4565.68	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=10.931;DP=544;FS=0.483;HRun=0;HaplotypeScore=203.8257;InbreedingCoeff=0.8387;MQ=43.90;MQ0=11;MQRankSum=-8.587;QD=12.61;ReadPosRankSum=-0.411;VQSLOD=3.6961;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:39,1:39:9.23:137,9,0	1/1:12,0:12:6.02:99,6,0	0/0:10,0:2:2.97:0,3,20	0/0:14,0:3:3.01:0,3,56	0/0:27,0:27:58.73:0,59,2044	1/1:17,1:17:18.06:345,18,0	1/1:25,0:25:32.28:390,32,0	1/1:15,0:14:18.05:235,18,0	1/1:26,0:25:18.05:233,18,0	0/0:17,0:16:42.14:0,42,1528	0/0:14,0:14:42.14:0,42,1508	0/0:21,0:21:47.40:0,47,1272	1/1:20,0:19:21.39:435,21,0	1/1:24,1:23:15:277,15,0	0/0:13,0:13:24.08:0,24,622	0/0:24,0:23:66.21:0,66,2034	1/1:29,0:29:45.09:733,45,0	1/1:18,0:17:18.03:283,18,0	1/1:7,0:6:17.98:203,18,0	1/1:14,1:14:15.02:336,15,0	1/1:32,0:31:11.71:167,12,0	1/1:16,0:16:3.90:51,4,0	1/1:11,0:11:2.22:7,2,0	1/1:30,1:29:23.93:397,24,0	1/1:18,0:18:9.50:143,10,0	0/0:28,0:27:75.13:0,75,2035	1/1:4,0:2:6.02:96,6,0	0/0:13,0:13:36.11:0,36,1619
chr10	103089729	.	TGTGTGTGCGC	T	6399.59	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=10.373;DP=549;FS=0.977;HRun=0;HaplotypeScore=187.6299;InbreedingCoeff=0.7980;MQ=44.04;MQ0=11;MQRankSum=-7.879;QD=16.71;ReadPosRankSum=-1.105;VQSLOD=3.9983;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,23:38:11.83:236,12,0	1/1:3,9:12:6.02:191,6,0	0/0:7,0:1:2.96:0,3,19	0/1:16,0:3:11.92:12,0,85	0/0:27,0:27:58.90:0,59,1861	1/1:11,6:16:21.07:524,21,0	1/1:23,4:27:38.28:865,38,0	1/1:14,0:13:20.86:317,21,0	1/1:7,19:25:17.89:291,18,0	0/0:17,0:16:42.14:0,42,1475	0/0:14,0:14:42.14:0,42,1474	0/0:21,0:21:47.38:0,47,1411	1/1:12,8:19:41.95:732,42,0	1/1:15,10:23:15.05:310,15,0	0/0:15,0:15:23.29:0,23,555	0/0:24,0:23:66.21:0,66,2164	1/1:28,0:28:44.94:636,45,0	1/1:8,11:18:10.30:352,10,0	1/1:4,4:7:20.94:270,21,0	1/1:8,7:14:15.02:336,15,0	1/1:34,0:33:14.34:167,14,0	1/1:6,10:16:6.02:136,6,0	1/1:9,2:11:3.01:51,3,0	1/1:14,17:29:23.53:469,24,0	1/1:12,6:18:12.04:321,12,0	0/0:28,0:27:75.13:0,75,2026	1/1:5,1:3:4.99:184,5,0	0/0:13,0:13:36.11:0,36,1477
chr10	103089735	.	TGC	T	1578.16	PASS	AB=0.930;AC=30;AF=0.536;AN=56;BaseQRankSum=11.209;DP=538;FS=2.837;HRun=0;HaplotypeScore=152.9353;InbreedingCoeff=0.3052;MQ=44.35;MQ0=9;MQRankSum=-6.964;QD=4.25;ReadPosRankSum=0.276;VQSLOD=2.8040;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:36:8.20:40,0,8	1/1:11,0:11:5.68:29,6,0	0/0:8,0:1:2.92:0,3,17	0/1:18,0:5:36.66:37,0,44	0/0:25,0:25:45.25:0,45,660	0/1:17,0:16:23.56:62,0,24	1/1:22,7:29:14.39:244,14,0	1/1:11,1:12:9.64:141,10,0	0/1:26,0:25:1.32:90,0,1	0/0:18,0:17:1.80:0,2,519	0/0:17,0:17:23:0,23,613	0/0:20,0:20:42.96:0,43,653	1/1:20,1:20:7.71:151,8,0	1/1:23,0:21:14.34:76,14,0	0/0:16,0:16:24:0,24,262	0/0:24,0:23:35.13:0,35,840	1/1:13,14:27:44.68:439,45,0	0/1:16,0:16:29.19:54,0,29	1/1:8,0:7:18.43:102,18,0	0/1:15,0:14:15.40:34,0,15	0/1:26,2:27:27.24:27,0,32	1/1:16,0:16:5.87:35,6,0	1/1:10,0:10:2.94:18,3,0	1/1:27,0:25:5.17:50,5,0	1/1:18,1:19:11.63:88,12,0	0/0:26,0:25:40.75:0,41,716	0/1:3,6:7:9.68:47,0,10	0/0:13,0:13:5.12:0,5,483
chr10	103089739	.	CGT	C	435.52	PASS	AB=0.985;AC=24;AF=0.429;AN=56;BaseQRankSum=8.241;DP=529;FS=3.706;HRun=0;HaplotypeScore=149.1552;InbreedingCoeff=-0.3158;MQ=44.96;MQ0=8;MQRankSum=-4.617;QD=1.10;ReadPosRankSum=5.284;VQSLOD=2.4180;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:37:4.12:4,0,37	1/1:10,0:10:5.60:26,6,0	0/0:13,0:6:14.96:0,15,138	0/0:21,0:7:16.96:0,17,154	0/0:23,1:24:0.73:0,1,372	0/1:16,0:15:34.19:34,0,54	0/1:30,0:30:42:42,0,47	0/0:11,0:11:10.09:0,10,68	0/1:25,0:24:25.13:25,0,33	0/1:16,1:16:33.87:34,0,404	0/0:17,1:18:6.88:0,7,545	0/1:24,0:24:25.37:25,0,519	0/1:20,0:19:13.62:14,0,98	0/1:20,0:19:13.68:26,0,14	0/0:12,0:20:15:0,15,149	0/1:24,0:23:5.59:6,0,633	0/1:28,0:28:12.84:150,0,13	0/1:14,0:14:13.97:14,0,79	0/1:8,0:7:10.69:11,0,11	0/1:14,0:13:14.86:15,0,41	0/0:26,0:25:10.83:0,11,123	1/1:14,0:14:2.80:13,3,0	0/1:8,0:8:0:0,0,0	0/1:24,0:22:14.28:27,0,14	1/1:18,0:18:8.52:42,9,0	0/1:21,2:23:31.50:31,0,419	0/1:10,0:7:17.43:17,0,46	0/1:10,2:12:34.50:35,0,434
chr10	103090235	.	G	GGTTT	1829.93	PASS	AB=0.678;AC=18;AF=0.321;AN=56;BaseQRankSum=6.450;DP=595;FS=1.822;HRun=0;HaplotypeScore=128.3768;InbreedingCoeff=-0.0042;MQ=74.97;MQ0=2;MQRankSum=-3.735;QD=5.79;ReadPosRankSum=-5.666;VQSLOD=0.2439;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:22:20.78:133,0,21	0/1:5,0:12:69.30:107,0,69	0/0:28,0:20:10.09:0,10,296	0/1:20,0:14:19.71:20,0,53	0/0:16,0:17:10.18:0,10,554	1/1:2,0:23:22:312,22,0	0/1:11,0:23:78.96:79,0,209	0/0:14,0:23:16.15:0,16,443	1/1:4,1:21:10:305,10,0	0/0:27,0:30:12.85:0,13,805	0/1:20,0:22:7.53:8,0,389	0/0:19,0:24:52.06:0,52,983	0/1:4,0:12:46.71:47,0,50	0/1:11,0:20:99:263,0,123	0/1:3,0:18:17.03:17,0,184	0/0:17,0:18:25.81:0,26,557	0/0:12,0:25:47.88:0,48,518	0/1:12,0:29:67.01:67,0,263	0/0:10,0:23:59.22:0,59,743	0/0:11,0:23:43.50:0,43,536	0/0:9,0:19:44.97:0,45,549	1/1:7,0:20:11.11:327,11,0	0/1:9,0:25:97.25:136,0,97	0/1:5,0:25:21.80:67,0,22	0/1:14,0:24:99:117,0,104	0/0:14,0:16:24.66:0,25,527	0/0:6,0:20:21.58:0,22,518	0/0:8,0:9:23.91:0,24,367
chr10	103090818	.	G	GCC	910.03	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.826;DP=482;FS=0.000;HRun=7;HaplotypeScore=69.0484;InbreedingCoeff=0.9375;MQ=70.40;MQ0=0;MQRankSum=-1.490;QD=12.47;ReadPosRankSum=-2.222;VQSLOD=-0.3008;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:87.22:0,87,999	0/0:6,0:6:15.04:0,15,174	0/0:17,0:17:39:0,39,396	0/0:17,0:13:25.44:0,25,318	0/0:13,0:13:32.99:0,33,373	0/0:17,0:17:48.10:0,48,542	0/0:13,0:13:30.05:0,30,334	1/1:10,9:17:23.41:212,23,0	0/0:17,0:17:36.08:0,36,419	0/0:10,0:10:30.04:0,30,333	0/0:7,0:7:15.03:0,15,174	0/0:37,0:37:99:0,99,1110	0/0:14,0:14:39.09:0,39,432	0/0:17,0:17:42.08:0,42,455	0/0:23,0:23:66.20:0,66,768	0/0:9,0:9:27.08:0,27,314	0/0:36,0:36:96.24:0,96,1103	0/0:27,0:27:72.14:0,72,809	1/1:4,9:13:23.55:321,24,0	1/1:0,6:6:3.48:49,3,0	1/1:6,18:24:18.06:295,18,0	0/0:7,0:7:14.92:0,15,174	0/0:9,0:9:20.63:0,21,234	0/0:35,0:35:87.21:0,87,999	0/0:14,0:14:38.97:0,39,410	0/0:14,0:14:36.06:0,36,404	1/1:1,9:10:12:196,12,0	0/0:15,0:15:42.10:0,42,469
chr10	103093161	.	AC	A	3183.70	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.439;DP=708;FS=2.331;HRun=6;HaplotypeScore=120.1811;InbreedingCoeff=0.9796;MQ=67.70;MQ0=7;MQRankSum=-4.430;QD=21.22;ReadPosRankSum=3.393;VQSLOD=2.1962;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:27:0,27,299	0/0:7,0:7:12.04:0,12,157	0/0:42,0:33:81.18:0,81,1056	0/0:44,0:30:75.09:0,75,930	0/0:20,0:20:48.14:0,48,592	0/0:16,0:16:17.77:0,18,154	0/0:29,0:29:38.62:0,39,463	1/1:4,30:25:63.15:675,63,0	0/0:30,0:30:54.17:0,54,694	0/0:24,0:24:72.18:0,72,891	0/0:11,0:10:30.07:0,30,364	0/0:29,0:29:84.24:0,84,1046	0/0:28,0:28:44.71:0,45,542	0/0:29,0:29:48.04:0,48,557	0/0:46,0:44:99:0,103,1190	0/0:22,0:22:66.19:0,66,824	0/0:28,0:28:59.19:0,59,717	0/0:15,0:15:18.06:0,18,235	1/1:1,23:21:54.09:559,54,0	1/1:2,14:15:39.49:394,39,0	1/1:8,42:46:99:1044,108,0	0/0:22,0:22:19.63:0,20,340	0/0:9,0:9:11.93:0,12,150	0/0:30,0:30:23.96:0,24,260	0/0:17,0:17:32.80:0,33,377	0/0:24,0:24:66.19:0,66,832	1/1:5,21:26:68.76:687,69,0	0/0:12,0:12:36.11:0,36,466
chr10	103093168	.	AAC	A	587.95	PASS	AB=0.983;AC=13;AF=0.232;AN=56;BaseQRankSum=0.152;DP=735;FS=4.004;HRun=0;HaplotypeScore=145.8672;InbreedingCoeff=0.0852;MQ=64.18;MQ0=13;MQRankSum=0.813;QD=2.23;ReadPosRankSum=1.591;VQSLOD=2.6452;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:25:16.66:23,0,17	0/0:7,0:7:3.89:0,4,28	0/0:47,0:31:7.01:0,7,180	0/0:46,0:26:19.83:0,20,255	0/0:20,0:21:33.06:0,33,438	0/1:14,0:14:5.85:12,0,6	0/0:29,0:29:3.01:0,3,7	0/0:42,0:33:29.82:0,30,326	0/1:26,0:26:8.04:8,0,33	0/0:26,0:26:60.18:0,60,905	0/1:13,0:12:2.20:2,0,438	0/1:28,1:28:13.40:13,0,719	0/0:26,0:27:10.39:0,10,88	0/1:27,0:27:8.43:8,0,38	1/1:16,26:41:38.19:628,38,0	0/1:22,1:24:1.32:1,0,613	0/0:17,0:34:19.32:0,19,127	0/0:10,0:15:16.61:0,17,141	0/0:25,0:22:23.87:0,24,155	0/1:16,0:15:2.73:3,0,86	0/0:56,0:51:60.39:0,60,450	0/0:21,0:21:5.82:0,6,20	0/0:8,0:8:1.25:0,1,3	1/1:31,0:30:1.26:16,1,0	0/1:16,0:16:8.85:9,0,26	0/0:24,0:24:12.87:0,13,671	0/0:26,0:27:52.17:0,52,418	0/0:14,1:15:0.69:0,1,384
chr10	103093185	.	A	ACACT	6322.03	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=6.516;DP=755;FS=2.879;HRun=0;HaplotypeScore=144.5276;InbreedingCoeff=0.2262;MQ=51.83;MQ0=22;MQRankSum=-4.393;QD=16.25;ReadPosRankSum=0.789;VQSLOD=4.7994;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:26.69:27,0,31	0/1:11,0:11:24.70:25,0,25	0/0:40,0:17:35.57:0,36,468	0/0:47,0:19:35.16:0,35,407	0/0:18,0:18:42.03:0,42,543	0/1:20,0:20:25.70:26,0,26	0/0:29,0:29:11.68:0,12,69	1/1:40,6:37:89.85:1031,90,0	0/1:28,0:28:34.81:35,0,37	0/0:29,0:27:63.79:0,64,1135	0/0:15,0:14:38.72:0,39,630	0/0:32,0:31:87.18:0,87,1203	0/1:24,0:23:27.88:132,0,28	0/0:24,0:24:9.15:0,9,66	0/0:32,0:30:62.39:0,62,670	0/0:25,0:25:66.14:0,66,1002	0/1:35,0:35:99:128,0,256	0/1:17,0:17:2.54:3,0,145	1/1:16,5:19:18.07:681,18,0	1/1:6,6:12:26.19:608,26,0	1/1:34,26:52:51.13:1920,51,0	0/1:23,0:23:47.35:47,0,55	0/1:15,0:15:11.06:12,0,11	0/0:40,0:39:4.11:0,4,38	0/1:18,0:18:25.76:26,0,33	0/0:21,0:21:57.16:0,57,956	1/1:11,14:29:74.18:1622,74,0	0/0:14,0:14:42.01:0,42,544
chr10	103093190	.	C	CACACACACAT	5060.07	PASS	AB=0.906;AC=27;AF=0.482;AN=56;BaseQRankSum=-2.996;DP=790;FS=0.000;HRun=0;HaplotypeScore=207.3536;InbreedingCoeff=0.5562;MQ=51.68;MQ0=25;MQRankSum=-7.618;QD=11.19;ReadPosRankSum=-0.377;VQSLOD=3.7398;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:4,20:37:41.56:338,0,42	1/1:0,8:11:8.78:292,9,0	0/1:38,0:14:71.25:71,0,184	0/1:49,0:15:53.64:54,0,380	0/0:18,0:18:38.94:0,39,676	1/1:1,17:22:12.04:456,12,0	1/1:4,21:30:14.93:382,15,0	0/0:37,0:32:10.34:0,10,378	1/1:4,21:33:15.05:505,15,0	0/0:30,0:28:42.25:0,42,1713	0/0:16,0:15:38.98:0,39,1013	0/0:33,0:32:80.05:0,80,1825	1/1:4,17:27:21.02:849,21,0	1/1:2,14:28:12.04:349,12,0	0/0:31,0:29:65.92:0,66,1456	0/0:25,0:25:72.97:0,73,1628	0/1:37,0:37:99:115,0,255	1/1:15,1:16:41.78:613,42,0	0/0:21,0:18:16.80:0,17,204	0/1:16,0:15:26.06:26,0,48	0/0:59,0:52:39.84:0,40,510	1/1:1,18:27:12.04:379,12,0	1/1:1,13:16:3.01:88,3,0	1/1:5,27:40:6.49:183,6,0	1/1:1,16:23:9.03:360,9,0	0/0:21,0:21:54.18:0,54,1230	0/0:33,0:33:9.90:0,10,333	0/0:14,0:14:30.04:0,30,643
chr10	103093191	.	ACT	A	555.99	PASS	AB=0.990;AC=17;AF=0.304;AN=56;BaseQRankSum=7.322;DP=757;FS=2.677;HRun=0;HaplotypeScore=148.6464;InbreedingCoeff=-0.0916;MQ=51.39;MQ0=25;MQRankSum=-5.695;QD=1.38;ReadPosRankSum=-1.658;VQSLOD=2.6427;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:24.84:57,0,25	0/1:11,0:11:12.59:25,0,13	0/1:36,0:14:72.01:72,0,164	0/1:49,0:15:50.75:51,0,336	0/0:16,0:16:38.74:0,39,548	0/1:21,0:21:29.65:53,0,30	0/1:27,0:27:9.39:50,0,9	0/0:34,0:30:3.13:0,3,705	0/1:32,0:33:4.56:55,0,5	0/0:32,0:30:34.78:0,35,1127	0/0:16,0:15:31.28:0,31,646	0/0:32,0:31:56.59:0,57,1124	0/1:23,0:23:7.42:7,0,118	1/1:25,0:25:7.92:65,8,0	0/1:31,0:29:27.41:132,0,27	0/0:25,0:25:58.87:0,59,965	0/0:34,0:34:39.11:0,39,406	0/0:17,0:17:19.21:0,19,313	0/0:21,0:18:14.41:0,14,331	0/1:14,1:14:35.11:35,0,147	0/0:59,0:52:14.58:0,15,705	0/1:26,1:27:18.99:19,0,77	0/1:15,0:15:5.50:6,0,27	1/1:34,0:33:5.59:50,6,0	0/1:23,0:23:33.30:40,0,33	0/0:21,0:21:54.09:0,54,849	0/0:31,2:33:33.24:0,33,672	0/0:14,0:14:18.53:0,19,413
chr10	103093221	.	T	TCA	2652.49	PASS	AB=0.911;AC=10;AF=0.179;AN=56;BaseQRankSum=7.993;DP=760;FS=0.000;HRun=0;HaplotypeScore=145.1131;InbreedingCoeff=0.6741;MQ=53.09;MQ0=19;MQRankSum=-7.568;QD=14.99;ReadPosRankSum=-1.653;VQSLOD=3.3567;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:32,1:32:20.23:20,0,305	0/0:9,0:9:8.87:0,9,117	0/0:47,0:8:10.57:0,11,101	0/0:57,1:17:33.37:0,33,313	0/0:18,0:18:45.04:0,45,565	0/0:15,0:15:12.04:0,12,156	0/0:31,0:31:53.15:0,53,676	0/1:19,4:19:12.07:418,0,12	0/0:34,0:34:30.70:0,31,396	0/0:30,0:30:81.21:0,81,1004	0/0:16,0:15:33.10:0,33,420	0/0:28,0:28:72.22:0,72,922	0/0:24,0:23:44.92:0,45,546	0/0:22,0:22:21.07:0,21,271	0/0:31,0:31:75.23:0,75,954	0/0:27,0:28:72.20:0,72,907	0/0:37,0:37:78.25:0,78,1006	0/0:20,0:20:54.17:0,54,701	1/1:11,10:15:1.28:262,1,0	1/1:8,14:22:28.96:466,29,0	1/1:31,18:43:19.85:500,20,0	0/0:27,0:26:62.77:0,63,739	0/0:16,0:16:24.05:0,24,285	0/0:38,0:37:36.11:0,36,463	0/0:22,0:22:18.06:0,18,232	0/0:19,0:19:51.16:0,51,652	1/1:7,22:29:72.21:1145,72,0	0/0:11,0:10:30.10:0,30,386
chr10	103093265	.	ACT	A	3731.50	PASS	AB=0.760;AC=8;AF=0.143;AN=56;BaseQRankSum=13.740;DP=842;FS=0.835;HRun=0;HaplotypeScore=142.4460;InbreedingCoeff=0.2995;MQ=56.01;MQ0=22;MQRankSum=-4.694;QD=16.15;ReadPosRankSum=-1.208;VQSLOD=3.4820;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:55.29:0,55,1382	0/0:15,0:15:35.83:0,36,692	0/1:41,0:11:10.45:10,0,216	0/0:46,0:12:2.17:0,2,114	0/0:26,0:26:75.14:0,75,1292	0/0:16,0:16:42.13:0,42,764	0/0:33,0:33:90.04:0,90,1365	0/1:27,12:28:99:340,0,566	0/0:31,0:31:57.20:0,57,1093	0/0:27,0:27:78.21:0,78,1285	0/0:17,0:17:51.13:0,51,874	0/0:26,0:26:72.15:0,72,1150	0/0:30,0:30:69.13:0,69,1317	0/0:29,0:29:72.02:0,72,1335	0/0:27,0:26:72.23:0,72,1349	0/0:27,0:27:69.19:0,69,1213	0/0:45,0:45:99:0,105,2020	0/0:23,0:23:69.06:0,69,1148	0/1:12,12:18:99:392,0,113	1/1:2,23:25:1.10:762,1,0	0/1:23,39:57:99:959,0,146	0/0:25,0:25:50.33:0,50,1139	0/0:24,0:24:53.85:0,54,1002	0/0:37,0:37:48:0,48,923	0/0:24,0:24:51.16:0,51,950	0/0:28,0:28:59.34:0,59,1381	1/1:4,34:38:37.08:1267,37,0	0/0:14,0:14:42.05:0,42,651
chr10	103093375	.	C	CTCTATA	4673.45	PASS	AB=1.000;AC=29;AF=0.558;AN=52;BaseQRankSum=5.280;DP=526;FS=2.932;HRun=0;HaplotypeScore=124.2877;InbreedingCoeff=0.6041;MQ=63.34;MQ0=6;MQRankSum=-2.371;QD=16.12;ReadPosRankSum=1.139;VQSLOD=4.4674;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,20:24:3.01:67,3,0	1/1:1,2:4:5.85:95,6,0	0/0:12,0:11:24.04:0,24,372	0/0:15,0:11:19.25:0,19,330	0/0:27,0:26:63.15:0,63,1229	1/1:0,15:16:3.48:110,3,0	1/1:16,0:16:30.05:574,30,0	1/1:18,0:18:4.81:197,5,0	1/1:1,7:9:3.01:45,3,0	0/0:32,0:30:87.16:0,87,1655	0/0:12,0:12:21.06:0,21,414	0/0:20,0:20:52.72:0,53,1080	1/1:0,13:13:3.01:71,3,0	./.	0/0:23,0:23:12.48:0,12,170	0/0:16,0:16:40.32:0,40,827	1/1:25,1:26:64.01:1579,64,0	1/1:3,21:24:21.07:603,21,0	0/1:13,0:12:38.84:56,0,39	0/1:22,0:22:38.45:122,0,38	0/1:25,0:24:30.80:31,0,153	1/1:10,0:9:15.02:342,15,0	1/1:1,0:22:6.35:77,6,0	1/1:26,0:26:34.37:589,34,0	./.	0/0:25,0:25:69.13:0,69,1273	1/1:17,0:16:11.14:117,11,0	0/0:22,0:20:51.07:0,51,802
chr10	103093381	.	ATATATGTGTGTGTGTGTGTGTGTG	A	303.16	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.353;DP=496;FS=7.086;HRun=0;HaplotypeScore=237.0175;InbreedingCoeff=0.3842;MQ=58.39;MQ0=8;MQRankSum=-2.686;QD=13.78;ReadPosRankSum=0.551;VQSLOD=1.5715;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:19:6.02:0,6,307	0/0:5,0:5:6.02:0,6,584	0/0:8,0:7:19.69:0,20,299	0/0:12,0:8:24.05:0,24,429	0/0:28,0:26:63.04:0,63,3196	0/0:13,0:13:3.01:0,3,274	0/0:14,0:14:27.09:0,27,1385	0/0:13,0:13:39.11:0,39,781	0/0:12,0:12:5.38:0,5,319	0/0:33,0:31:84.27:0,84,3408	0/0:12,0:12:18.06:0,18,954	0/0:20,0:20:57.18:0,57,4192	0/0:12,0:12:5.81:0,6,188	0/0:8,0:8:6.02:0,6,630	1/1:0,22:22:6.02:383,6,0	0/0:18,0:18:48.16:0,48,2905	0/0:25,0:25:69.23:0,69,2869	0/0:23,0:22:24.08:0,24,1665	0/0:11,0:10:24.08:0,24,1008	0/0:22,0:22:39.09:0,39,1721	0/0:27,0:26:60.18:0,60,3042	0/0:10,0:9:14.68:0,15,430	0/0:19,0:19:6.37:0,6,595	0/0:25,0:24:36.12:0,36,2137	0/0:22,0:22:3.01:0,3,279	0/0:22,0:22:66.21:0,66,3934	0/0:18,0:17:41.36:0,41,1103	0/0:20,0:17:42.14:0,42,2355
chr10	103094177	.	A	AAC	869.30	PASS	AB=0.821;AC=20;AF=0.400;AN=50;BaseQRankSum=-3.156;DP=479;FS=3.349;HRun=0;HaplotypeScore=74.3415;InbreedingCoeff=0.0915;MQ=64.64;MQ0=15;MQRankSum=1.118;QD=3.44;ReadPosRankSum=-2.270;VQSLOD=1.7097;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,5:38:35.24:35,0,47	1/1:7,1:8:3.01:44,3,0	./.	./.	0/0:16,0:16:5.79:0,6,45	1/1:12,7:21:6.02:89,6,0	0/1:17,4:20:23.21:79,0,23	./.	0/1:11,7:18:14.18:203,0,14	0/0:8,0:10:8.69:0,9,60	0/0:8,0:9:2.84:0,3,14	0/0:6,0:6:3:0,3,32	1/1:10,0:10:12.45:114,12,0	0/1:10,0:14:20.18:20,0,26	0/0:6,0:14:17.04:0,17,84	0/1:10,1:11:35.24:35,0,47	0/0:15,0:19:2.53:0,3,14	0/1:19,1:21:5.33:48,0,5	0/0:14,0:13:2.22:0,2,7	0/0:8,0:10:5.68:0,6,28	1/1:14,0:14:0.47:1,0,0	1/1:11,0:10:3.01:44,3,0	1/1:16,1:18:5.61:81,6,0	0/1:20,8:31:17.21:143,0,17	0/1:10,3:15:5.12:80,0,5	0/0:14,0:14:6:0,6,58	0/0:11,0:21:25.52:0,26,125	0/0:13,0:14:20.88:0,21,207
chr10	103094262	.	C	CA	1574.74	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.218;DP=461;FS=2.468;HRun=9;HaplotypeScore=53.8813;InbreedingCoeff=0.9440;MQ=76.25;MQ0=0;MQRankSum=-1.354;QD=21.00;ReadPosRankSum=-3.025;VQSLOD=3.1214;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:86.97:0,87,755	0/0:11,0:11:32.99:0,33,286	0/0:14,0:15:24.60:0,25,172	0/0:9,0:8:14.03:0,14,108	0/0:23,0:23:59.97:0,60,521	0/0:16,0:16:38.88:0,39,329	0/0:19,0:19:53.99:0,54,468	1/1:6,25:31:74.61:773,75,0	0/0:19,0:19:47.96:0,48,413	0/0:17,0:17:44.98:0,45,390	0/0:16,0:16:38.95:0,39,332	0/0:15,0:15:35.98:0,36,312	0/0:8,0:8:24:0,24,208	0/0:10,0:10:20.96:0,21,182	0/0:20,1:21:14.78:0,15,357	0/0:15,0:15:38.98:0,39,338	0/0:29,0:29:83.94:0,84,722	0/0:20,1:21:17.78:0,18,383	1/1:4,7:12:20.12:259,20,0	1/1:1,12:13:33.05:352,33,0	1/1:2,1:3:3.01:33,3,0	0/0:14,0:14:38.99:0,39,339	0/0:15,0:15:38.96:0,39,335	0/0:17,0:17:47.99:0,48,417	0/0:17,0:17:44.99:0,45,391	0/0:18,0:18:50.98:0,51,441	1/1:5,10:16:32.71:326,33,0	0/0:8,0:8:24:0,24,208
chr10	103094367	.	A	ATTTG	4541.18	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.407;DP=667;FS=3.581;HRun=0;HaplotypeScore=105.5304;InbreedingCoeff=0.9797;MQ=67.95;MQ0=2;MQRankSum=-0.724;QD=37.22;ReadPosRankSum=-3.135;VQSLOD=3.9197;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:81.84:0,82,1435	0/0:4,0:4:9.02:0,9,123	0/0:27,0:21:13.93:0,14,226	0/0:25,0:23:34.70:0,35,578	0/0:20,0:21:48.12:0,48,700	0/0:20,0:21:45.08:0,45,675	0/0:21,0:21:30.09:0,30,458	1/1:18,16:35:48.13:924,48,0	0/0:22,0:22:57.19:0,57,923	0/0:21,0:21:57.19:0,57,898	0/0:24,0:24:45.14:0,45,708	0/0:18,0:18:42.13:0,42,652	0/0:21,0:21:48.16:0,48,753	0/0:25,0:25:56.93:0,57,803	0/0:27,0:27:66.09:0,66,959	0/0:21,0:21:42.13:0,42,657	0/0:38,0:38:77.92:0,78,1196	0/0:27,0:27:45.15:0,45,728	1/1:10,4:15:17.79:254,18,0	1/1:6,21:31:66.01:1326,66,0	1/1:1,18:19:45.15:1092,45,0	0/0:23,0:24:48.14:0,48,713	0/0:21,0:21:42.11:0,42,630	0/0:19,0:19:54.18:0,54,870	0/0:27,0:27:42.14:0,42,683	0/0:33,0:33:84.28:0,84,1336	1/1:4,17:21:39.13:945,39,0	0/0:19,0:19:42.13:0,42,659
chr10	103095596	.	T	TG	7034.10	PASS	AB=0.774;AC=35;AF=0.625;AN=56;BaseQRankSum=-1.054;DP=597;FS=0.000;HRun=9;HaplotypeScore=80.2515;InbreedingCoeff=0.6303;MQ=75.61;MQ0=0;MQRankSum=-2.677;QD=16.83;ReadPosRankSum=-0.432;VQSLOD=4.7636;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,25:33:49.15:761,49,0	0/1:4,4:8:17.03:57,0,17	0/1:22,0:21:29.10:29,0,139	0/1:14,0:14:5.80:6,0,95	0/0:21,0:21:44.96:0,45,391	1/1:4,13:17:33.09:365,33,0	1/1:10,22:32:8.05:544,8,0	1/1:19,0:19:37.35:194,37,0	1/1:6,23:30:48.12:523,48,0	0/0:24,1:25:23.79:0,24,436	0/0:9,0:9:23.98:0,24,208	0/0:30,2:32:14.60:0,15,585	1/1:1,9:10:21.06:232,21,0	1/1:6,14:20:13.05:372,13,0	0/0:26,0:26:68.97:0,69,599	0/0:30,0:30:74.93:0,75,644	1/1:5,22:27:63.17:697,63,0	1/1:2,20:22:60.16:664,60,0	1/1:17,0:17:43.24:244,43,0	1/1:19,0:19:47.03:285,47,0	1/1:27,0:27:55.78:333,56,0	1/1:2,12:15:29.91:313,30,0	0/1:8,8:16:5:179,0,5	1/1:5,17:22:2.06:479,2,0	0/1:7,19:26:3.90:416,0,4	0/0:26,0:27:59.01:0,59,498	1/1:21,0:21:55.90:340,56,0	0/0:8,0:9:20.02:0,20,162
chr10	103095598	.	G	GA	4366.17	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=9.359;DP=583;FS=3.173;HRun=0;HaplotypeScore=84.9889;InbreedingCoeff=0.1141;MQ=75.34;MQ0=0;MQRankSum=-1.620;QD=12.06;ReadPosRankSum=5.723;VQSLOD=5.2326;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:51.98:121,0,52	0/0:9,0:9:0.70:0,1,83	0/0:22,0:20:53.98:0,54,531	0/0:15,0:15:34.23:0,34,284	0/0:21,0:21:60.13:0,60,752	0/1:16,0:16:40.68:49,0,41	0/1:31,0:31:48.39:48,0,196	1/1:1,18:19:54.10:681,54,0	0/1:30,0:30:54.65:55,0,62	0/0:27,0:27:65.81:0,66,887	0/0:9,0:9:27.08:0,27,361	0/0:30,0:30:75.94:0,76,1114	0/1:11,0:11:0.91:30,0,1	0/1:17,0:17:43.34:43,0,61	0/0:26,0:26:78.23:0,78,1040	0/0:29,0:29:84.22:0,84,1117	0/1:29,0:29:84.73:85,0,86	0/1:24,0:24:41.36:82,0,41	1/1:0,17:17:51.15:695,51,0	1/1:0,17:17:48.16:685,48,0	1/1:1,26:27:57.18:815,57,0	0/1:14,0:14:18.85:32,0,19	0/1:11,0:11:20.24:20,0,43	0/1:22,0:22:66.22:66,0,113	0/1:24,0:24:43.37:43,0,134	0/0:24,0:24:68.17:0,68,874	1/1:0,21:21:57.19:815,57,0	0/0:9,0:9:27:0,27,320
chr10	103096269	.	TATCC	T	9345.17	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=13.147;DP=752;FS=18.930;HRun=0;HaplotypeScore=133.6183;InbreedingCoeff=0.9950;MQ=76.20;MQ0=1;MQRankSum=-2.744;QD=29.02;ReadPosRankSum=6.605;VQSLOD=2.9881;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,20:32:33.11:549,33,0	1/1:3,4:7:12.04:200,12,0	0/0:47,0:39:51.43:0,51,1315	0/0:42,0:38:64.44:0,64,1413	0/0:14,0:14:36.12:0,36,877	1/1:10,26:36:72.25:1198,72,0	1/1:6,13:19:24.08:399,24,0	0/0:30,0:30:48.16:0,48,1142	1/1:6,26:32:63.22:1048,63,0	0/0:32,0:32:72.22:0,72,1632	0/0:11,0:11:23.87:0,24,514	0/0:34,0:34:93.31:0,93,2168	1/1:4,22:26:51.12:817,51,0	1/1:9,19:28:45.15:749,45,0	0/0:36,0:36:75.25:0,75,1760	0/0:29,0:29:78.24:0,78,1822	1/1:3,26:29:57.19:948,57,0	1/1:5,10:15:27.09:449,27,0	0/0:21,0:21:48.14:0,48,1011	0/0:22,0:22:51.13:0,51,1095	0/0:43,0:43:99:0,99,2410	1/1:6,21:27:54.12:867,54,0	1/1:1,19:20:45.15:736,45,0	1/1:10,21:31:39.13:649,39,0	1/1:3,17:20:45.15:736,45,0	0/0:35,0:35:93.32:0,93,2272	0/0:19,0:19:42.12:0,42,883	0/0:15,0:15:36.12:0,36,833
chr10	103096310	.	CATCT	C	1156.62	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.174;DP=747;FS=1.736;HRun=0;HaplotypeScore=166.7110;InbreedingCoeff=0.9851;MQ=59.93;MQ0=5;MQRankSum=0.158;QD=28.92;ReadPosRankSum=3.417;VQSLOD=3.5013;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:21:25.96:0,26,583	0/0:6,0:6:18.06:0,18,442	0/0:34,0:28:51.17:0,51,1177	0/0:31,0:26:32.61:0,33,695	0/0:15,0:15:27.09:0,27,678	0/0:30,0:30:66.21:0,66,1563	0/0:22,0:22:42.14:0,42,976	0/0:43,0:43:99:0,111,2692	0/0:37,0:37:84.29:0,84,2050	0/0:35,0:35:93.31:0,93,2227	0/0:15,0:15:39.13:0,39,888	0/0:34,0:34:96.33:0,96,2271	0/0:29,0:29:75.24:0,75,1805	0/0:24,0:24:54.19:0,54,1337	1/1:4,36:40:71.98:1251,72,0	0/0:35,0:35:90.31:0,90,2247	0/0:37,0:38:82.82:0,83,1926	0/0:17,0:17:45.15:0,45,1134	0/0:18,0:16:33.11:0,33,809	0/0:18,0:17:45.15:0,45,1107	0/0:46,0:46:99:0,111,2666	0/0:30,0:30:60.21:0,60,1441	0/0:20,0:20:39.13:0,39,983	0/0:27,0:29:50.89:0,51,1243	0/0:12,0:12:21.07:0,21,503	0/0:29,0:29:78.27:0,78,1950	0/0:23,0:23:63.22:0,63,1564	0/0:15,0:15:42.14:0,42,1067
chr10	103097968	.	ATG	A	1223.14	PASS	AB=0.976;AC=19;AF=0.339;AN=56;BaseQRankSum=7.743;DP=299;FS=8.827;HRun=0;HaplotypeScore=87.9947;InbreedingCoeff=-0.0862;MQ=55.32;MQ0=0;MQRankSum=-7.236;QD=6.24;ReadPosRankSum=8.599;VQSLOD=1.2295;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:92.56:107,0,93	0/1:4,0:4:16.33:19,0,16	0/1:7,0:7:12.05:12,0,133	0/1:3,0:3:1.46:1,0,4	0/0:3,0:3:2.99:0,3,24	1/1:9,1:10:8.23:127,8,0	0/1:17,0:17:49.05:118,0,49	0/0:9,0:9:11.70:0,12,152	0/1:18,1:19:40.76:178,0,41	0/0:11,0:11:12.78:0,13,159	0/0:3,0:3:5.99:0,6,49	0/0:11,0:13:22.72:0,23,216	0/1:15,0:15:30.10:134,0,30	1/1:17,2:19:9.33:240,9,0	0/0:7,0:7:14.95:0,15,185	0/0:8,0:8:9.92:0,10,133	0/1:10,0:10:20.06:74,0,20	0/1:13,0:12:38.88:39,0,73	0/1:6,1:8:12.67:13,0,105	0/1:8,0:8:0.29:0,0,55	0/0:23,0:24:19.49:0,19,250	0/1:15,1:16:81.61:101,0,82	0/0:6,0:6:0.81:0,1,78	1/1:17,0:17:7.84:134,8,0	0/1:9,0:9:22.83:84,0,23	0/0:12,0:12:32.51:0,33,242	0/0:4,0:5:13.69:0,14,87	0/0:2,0:2:2.99:0,3,24
chr10	103097969	.	TGG	T	3854.56	PASS	AB=0.712;AC=32;AF=0.615;AN=52;BaseQRankSum=-3.690;DP=297;FS=2.805;HRun=11;HaplotypeScore=81.4145;InbreedingCoeff=0.4320;MQ=53.38;MQ0=0;MQRankSum=-3.170;QD=16.13;ReadPosRankSum=5.171;VQSLOD=2.5028;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,8:20:38.08:380,38,0	1/1:2,2:4:5.97:64,6,0	0/0:7,0:7:4.54:0,5,52	0/0:2,0:2:2.84:0,3,14	./.	1/1:3,7:10:27.05:278,27,0	1/1:11,6:18:40.48:412,40,0	0/1:4,1:10:16.44:16,0,27	1/1:6,12:18:42.10:445,42,0	0/1:7,0:11:12.97:13,0,58	0/0:4,0:5:8.99:0,9,75	0/0:11,0:15:30.18:0,30,160	1/1:3,11:14:36.09:383,36,0	1/1:6,12:18:51.11:533,51,0	0/0:7,0:7:12.03:0,12,165	0/1:3,1:7:15.30:21,0,15	1/1:3,6:9:21.05:223,21,0	1/1:8,5:12:21.04:217,21,0	0/1:5,0:8:11.78:12,0,38	0/1:4,1:8:10.19:23,0,10	0/1:20,0:23:3.09:3,0,11	1/1:8,7:15:27.06:285,27,0	1/1:4,1:6:3:32,3,0	1/1:6,12:18:7.44:292,7,0	1/1:3,6:9:21.05:223,21,0	0/0:11,0:12:12.48:0,12,43	0/0:3,0:5:10.16:0,10,37	./.
chr10	103097979	.	GGT	G	1627.52	PASS	AB=0.929;AC=18;AF=0.333;AN=54;BaseQRankSum=5.987;DP=325;FS=6.375;HRun=0;HaplotypeScore=101.0353;InbreedingCoeff=-0.1096;MQ=52.98;MQ0=0;MQRankSum=-8.314;QD=7.94;ReadPosRankSum=9.039;VQSLOD=1.7659;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:27,4:31:99:215,0,234	1/1:3,0:3:5.59:27,6,0	0/1:6,0:6:13.94:14,0,29	./.	0/0:4,0:4:2.99:0,3,24	0/1:10,0:10:18.60:78,0,19	0/1:17,4:21:81.65:211,0,82	0/0:17,0:17:36.08:0,36,326	1/1:15,3:18:6.57:206,7,0	0/0:12,1:13:5.18:0,5,187	0/0:5,0:5:11.59:0,12,85	0/0:15,1:16:30.69:0,31,274	0/1:15,1:16:38.42:137,0,38	0/1:18,3:21:37.26:268,0,37	0/0:7,0:7:14.12:0,14,180	0/1:7,0:7:10.73:11,0,116	0/1:10,1:11:20.46:104,0,20	0/1:11,2:12:86.16:98,0,86	0/0:10,0:10:16.37:0,16,97	0/1:7,0:7:2.10:2,0,39	0/0:22,0:22:22.64:0,23,156	1/1:8,3:11:10.93:184,11,0	0/0:5,0:5:0.64:0,1,67	0/1:18,2:20:79.67:131,0,80	0/1:9,1:10:37.46:99,0,37	0/0:12,0:12:33.67:0,34,242	0/0:4,0:4:9.19:0,9,50	0/0:3,0:3:2.97:0,3,24
chr10	103098473	.	CTTGCTGCTGGCATTCCCAGCATTCT	C	891.06	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=3.447;DP=716;FS=9.740;HRun=0;HaplotypeScore=438.9009;InbreedingCoeff=0.7243;MQ=78.91;MQ0=1;MQRankSum=0.608;QD=4.71;ReadPosRankSum=0.241;VQSLOD=0.5348;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:69.21:0,69,4151	0/0:12,0:12:21.06:0,21,1164	0/1:26,0:26:4.55:5,0,120	0/0:27,0:26:10.28:0,10,163	0/0:23,0:23:33.11:0,33,1648	0/0:21,0:21:27.09:0,27,1134	0/0:41,0:41:69.23:0,69,4608	1/1:31,5:36:15.04:225,15,0	0/0:23,0:23:42.14:0,42,2713	0/0:31,0:31:30.09:0,30,1705	0/0:12,0:12:24.07:0,24,1560	0/0:23,0:23:39.12:0,39,3126	0/0:27,0:27:51.17:0,51,4024	0/0:38,0:38:75.22:0,75,3858	0/1:32,0:32:62.05:62,0,3904	0/0:20,0:20:33.11:0,33,3046	0/0:33,0:33:69.24:0,69,6235	0/0:25,0:25:42.12:0,42,2962	1/1:19,4:22:12.03:173,12,0	1/1:5,9:14:6.02:77,6,0	1/1:45,0:45:33.10:476,33,0	0/0:23,0:23:30.10:0,30,2023	0/0:16,0:16:33.10:0,33,1318	0/0:32,0:32:57.16:0,57,3532	0/0:10,0:10:21.07:0,21,1813	0/0:35,0:35:51.17:0,51,3209	1/1:13,0:13:3.01:38,3,0	0/0:17,0:17:36.12:0,36,2890
chr10	103101367	.	G	GC	10626.70	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-12.630;DP=631;FS=13.160;HRun=5;HaplotypeScore=64.1878;InbreedingCoeff=0.9994;MQ=85.89;MQ0=0;MQRankSum=-1.971;QD=34.39;ReadPosRankSum=2.999;VQSLOD=4.2174;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,43:46:99:1412,108,0	1/1:0,8:8:24.08:310,24,0	0/0:28,0:28:57.59:0,58,671	0/0:20,0:20:45.08:0,45,472	0/0:23,0:23:62.99:0,63,647	1/1:1,19:19:51.17:670,51,0	1/1:1,26:27:69.22:908,69,0	0/0:25,0:24:60.13:0,60,631	1/1:0,19:19:54.18:710,54,0	0/0:21,0:21:56.93:0,57,593	0/0:10,0:10:27.07:0,27,290	0/0:26,0:26:69.17:0,69,741	1/1:1,16:17:45.15:591,45,0	1/1:5,24:29:78.25:1018,78,0	0/0:24,0:24:72.17:0,72,766	0/0:17,0:17:45.11:0,45,484	1/1:0,33:33:90.29:1184,90,0	1/1:1,31:32:90.29:1184,90,0	0/0:12,0:12:30.05:0,30,313	0/0:17,0:17:48.12:0,48,516	0/0:39,0:40:99:0,110,1145	1/1:2,18:20:48.16:629,48,0	1/1:0,13:13:33.11:431,33,0	1/1:0,26:26:69.22:908,69,0	1/1:1,18:19:51.17:671,51,0	0/0:29,0:29:75.18:0,75,800	0/0:18,0:18:51.13:0,51,548	0/0:12,0:12:33.08:0,33,355
chr10	103101896	.	GCACACA	G	2568.14	PASS	AB=1.000;AC=29;AF=0.580;AN=50;BaseQRankSum=6.528;DP=528;FS=2.424;HRun=0;HaplotypeScore=126.3245;InbreedingCoeff=0.7962;MQ=74.33;MQ0=11;MQRankSum=-6.986;QD=9.34;ReadPosRankSum=-0.014;VQSLOD=2.5331;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:2.99:0,3,24	1/1:4,3:7:6:120,6,0	./.	./.	0/0:12,0:12:21.05:0,21,465	0/0:20,0:20:1.55:0,2,4	1/1:13,7:21:9.03:160,9,0	0/1:34,0:32:0:0,0,0	1/1:6,7:15:18.06:341,18,0	0/0:19,0:18:27.09:0,27,578	0/0:19,0:20:29.19:0,29,686	0/0:11,0:14:18.06:0,18,383	1/1:7,2:10:9.03:162,9,0	1/1:10,12:20:27.07:497,27,0	1/1:12,0:19:15.05:209,15,0	0/0:16,0:17:24.08:0,24,600	0/0:15,0:17:15.04:0,15,327	1/1:11,3:15:12.04:220,12,0	1/1:17,0:20:9.03:126,9,0	1/1:16,0:23:12.04:167,12,0	./.	1/1:8,5:13:3.90:38,4,0	1/1:11,0:12:12.04:189,12,0	1/1:20,3:24:8.92:114,9,0	1/1:10,3:14:6.91:118,7,0	0/0:12,0:12:17.18:0,17,307	1/1:16,0:26:20.90:293,21,0	0/0:8,0:14:12.04:0,12,281
chr10	103102731	.	CA	C	5849.22	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=10.761;DP=599;FS=11.526;HRun=9;HaplotypeScore=63.6806;InbreedingCoeff=0.9231;MQ=78.65;MQ0=0;MQRankSum=-0.272;QD=21.35;ReadPosRankSum=3.099;VQSLOD=5.0853;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:30:63.03:576,63,0	1/1:0,12:12:36.02:329,36,0	0/0:29,0:28:56.71:0,57,522	0/1:13,0:11:12.85:13,0,127	0/0:44,0:44:99:0,120,1356	1/1:0,16:16:42.02:384,42,0	1/1:0,21:21:48.03:439,48,0	0/0:32,0:32:81.19:0,81,905	1/1:1,13:14:36.02:329,36,0	0/0:22,0:22:63.16:0,63,708	0/0:26,0:26:66.19:0,66,756	0/0:15,0:16:44.95:0,45,488	1/1:1,14:15:27.01:247,27,0	1/1:1,22:23:51.03:466,51,0	0/0:15,0:16:47.95:0,48,514	0/0:13,1:14:8.66:0,9,335	1/1:1,22:23:57.03:521,57,0	1/1:0,17:17:48.03:439,48,0	0/0:17,0:17:45.11:0,45,501	0/0:34,0:35:93.08:0,93,1028	0/0:21,0:21:60.18:0,60,692	1/1:4,19:23:54.02:494,54,0	1/1:2,26:28:75.04:685,75,0	1/1:3,11:14:36.01:325,36,0	1/1:2,23:25:66.03:603,66,0	0/0:22,0:22:52.26:0,52,564	0/0:22,0:22:57.15:0,57,638	0/0:8,0:9:26.91:0,27,291
chr10	103103313	.	ACTCTCTCTCT	A	1389.46	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-1.292;DP=541;FS=0.000;HRun=0;HaplotypeScore=180.1835;InbreedingCoeff=0.7490;MQ=63.66;MQ0=10;MQRankSum=0.284;QD=11.39;ReadPosRankSum=0.539;VQSLOD=2.6030;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:48.16:0,48,1203	0/0:4,0:4:9.03:0,9,293	0/0:30,0:20:18.95:0,19,576	0/0:47,0:24:26.88:0,27,694	0/0:13,0:13:21.07:0,21,817	0/0:11,0:13:15.05:0,15,345	0/0:25,0:25:33.98:0,34,713	1/1:20,3:23:21.05:433,21,0	0/0:19,0:19:36.12:0,36,821	0/0:20,0:20:48.16:0,48,1735	0/0:14,0:14:21.06:0,21,784	0/0:22,0:22:54.17:0,54,2215	0/0:16,0:16:26.43:0,26,432	0/0:10,0:10:9.03:0,9,295	1/1:19,4:23:24.04:635,24,0	0/0:21,0:21:39.60:0,40,1491	0/0:30,0:31:60.01:0,60,1392	0/0:19,0:21:36.92:0,37,954	1/1:15,0:12:2.98:22,3,0	1/1:4,2:6:6.01:116,6,0	1/1:18,4:21:8.08:231,8,0	0/0:9,0:9:3.48:0,3,81	0/0:11,0:10:12.04:0,12,289	0/0:28,0:28:20.26:0,20,486	0/1:20,0:20:14.81:15,0,461	0/0:20,0:20:33.11:0,33,1176	1/1:7,0:13:8.73:107,9,0	0/0:7,0:7:11.99:0,12,337
chr10	103103341	.	TCTCACACA	T	2198.22	PASS	AB=0.995;AC=32;AF=0.571;AN=56;BaseQRankSum=4.274;DP=535;FS=0.468;HRun=0;HaplotypeScore=152.9794;InbreedingCoeff=0.2328;MQ=42.90;MQ0=22;MQRankSum=1.086;QD=5.20;ReadPosRankSum=0.277;VQSLOD=2.5502;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:44,0:42:41.88:333,42,0	0/1:6,0:6:36.62:77,0,37	0/1:11,0:4:1.71:2,0,31	0/1:18,0:6:18.66:19,0,48	0/0:15,0:15:16.10:0,16,566	1/1:14,1:15:4.95:72,5,0	1/1:29,0:29:22.81:179,23,0	0/1:19,0:15:10.12:10,0,330	1/1:22,0:22:31.55:234,32,0	0/1:17,0:17:65.92:66,0,614	0/1:13,0:13:3.49:3,0,242	0/0:28,0:27:66.49:0,66,1160	1/1:15,0:14:20.19:217,20,0	0/1:15,0:14:3:29,0,3	0/1:27,0:26:23.24:23,0,392	0/0:22,0:22:10.70:0,11,995	1/1:28,1:28:42.58:319,43,0	1/1:21,1:21:49.39:396,49,0	0/0:8,0:4:6.02:0,6,123	0/0:14,0:14:3.95:0,4,322	0/1:26,0:22:11.35:11,0,219	1/1:17,0:16:2.96:20,3,0	1/1:20,1:20:11.97:97,12,0	1/1:28,0:27:20.64:162,21,0	1/1:20,0:20:7.56:98,8,0	0/0:20,0:19:1.97:0,2,641	0/1:8,0:8:11.84:12,0,122	0/0:5,0:4:12.04:0,12,382
chr10	103103343	.	TCACACA	T	105.54	PASS	AB=0.968;AC=11;AF=0.229;AN=48;BaseQRankSum=4.960;DP=540;FS=1.062;HRun=0;HaplotypeScore=151.1109;InbreedingCoeff=0.3272;MQ=42.67;MQ0=23;MQRankSum=-3.808;QD=0.77;ReadPosRankSum=-0.677;VQSLOD=2.4958;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:6,0:6:6.02:86,6,0	./.	./.	0/0:16,0:15:15.05:0,15,404	0/0:14,1:15:0.40:0,0,26	0/0:28,1:29:5.85:0,6,36	0/0:20,0:16:29.93:0,30,426	0/1:22,0:22:5.51:6,0,26	0/1:17,0:17:9.46:9,0,420	0/0:13,0:13:8.98:0,9,139	0/0:28,0:27:45.08:0,45,817	1/1:15,0:14:5.41:31,5,0	0/1:14,1:14:25.48:25,0,50	0/0:28,0:27:20.17:0,20,436	0/0:23,0:23:30.10:0,30,725	0/0:29,0:28:4.45:0,4,70	1/1:22,0:21:5.50:70,5,0	0/0:8,0:4:6.02:0,6,155	0/0:14,0:14:14.99:0,15,360	0/0:29,0:25:11.80:0,12,246	./.	0/1:21,0:20:0:0,0,0	0/0:28,0:26:0:0,0,0	0/1:17,2:19:2.39:2,0,10	0/0:20,0:19:13.86:0,14,539	0/0:9,0:9:11.50:0,11,162	0/0:5,0:4:12.04:0,12,319
chr10	103103375	.	A	ATG	491	PASS	AB=0.750;AC=14;AF=0.250;AN=56;BaseQRankSum=6.966;DP=473;FS=0.000;HRun=0;HaplotypeScore=99.0881;InbreedingCoeff=0.2710;MQ=38.63;MQ0=31;MQRankSum=-6.020;QD=3.99;ReadPosRankSum=-1.489;VQSLOD=2.2403;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,7:19:0.97:0,1,2	1/1:0,3:3:6.02:83,6,0	0/0:18,0:2:6.02:0,6,87	0/0:24,0:1:3.01:0,3,45	0/0:19,0:18:33.09:0,33,482	0/1:6,5:11:16.70:17,0,33	1/1:10,6:16:8.80:72,9,0	0/0:28,0:26:51.76:0,52,831	0/1:7,6:12:26.89:47,0,27	0/0:19,0:18:51.13:0,51,719	0/0:9,0:9:12.04:0,12,171	0/0:24,0:23:50.75:0,51,783	1/1:5,3:7:11.76:74,12,0	0/1:10,3:13:31.77:32,0,56	0/0:36,0:34:42.39:0,42,649	0/0:19,0:19:44.53:0,45,689	0/1:15,3:17:22.12:75,0,22	0/1:5,6:10:22.38:219,0,22	0/0:13,0:7:14.99:0,15,172	0/0:21,0:20:12.17:0,12,232	0/0:39,0:32:27.51:0,28,340	0/1:7,2:8:0.21:0,0,0	0/1:5,4:9:0:0,0,0	0/0:10,9:17:0:0,0,0	0/1:9,3:12:15.87:21,0,16	0/0:18,0:18:54.15:0,54,804	0/0:10,0:10:14.78:0,15,172	0/0:13,0:12:36.08:0,36,530
chr10	103103382	.	TACAC	T	92.09	PASS	AB=0.935;AC=12;AF=0.231;AN=52;BaseQRankSum=5.909;DP=499;FS=0.000;HRun=0;HaplotypeScore=105.1672;InbreedingCoeff=0.3966;MQ=39.40;MQ0=29;MQRankSum=-4.739;QD=1.01;ReadPosRankSum=1.847;VQSLOD=1.8786;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,2:18:2.30:10,2,0	1/1:3,0:3:6.02:96,6,0	0/0:25,0:4:9.01:0,9,106	0/0:36,0:3:9.02:0,9,102	0/0:18,0:18:38.86:0,39,650	0/0:9,2:11:2.89:0,3,21	0/0:10,2:12:0:0,0,0	0/0:37,0:35:61.09:0,61,1354	1/1:13,0:12:2.06:13,2,0	0/0:22,0:21:42.78:0,43,827	0/0:10,0:10:15.05:0,15,231	0/0:25,0:24:59.51:0,60,922	1/1:6,0:5:2.84:9,3,0	0/1:10,1:11:16.66:21,0,17	0/0:36,0:34:47.95:0,48,964	0/0:20,0:20:48.14:0,48,943	0/1:13,1:13:9.66:14,0,10	0/1:7,1:8:36.20:57,0,36	0/0:18,0:12:27.03:0,27,419	0/0:21,0:20:26.59:0,27,529	0/0:38,0:31:26.61:0,27,519	./.	./.	0/1:16,0:15:0:0,0,0	0/0:6,5:11:2.55:0,3,21	0/0:21,0:21:59.71:0,60,903	0/0:11,0:11:20.05:0,20,257	0/0:17,0:16:29.13:0,29,679
chr10	103103428	.	T	TACACAC	658.29	PASS	AB=0.613;AC=7;AF=0.125;AN=56;BaseQRankSum=0.043;DP=566;FS=0.902;HRun=0;HaplotypeScore=156.6331;InbreedingCoeff=0.7814;MQ=52.36;MQ0=10;MQRankSum=-2.743;QD=9.02;ReadPosRankSum=-3.430;VQSLOD=2.0475;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:50.94:0,51,963	0/0:2,0:2:6.02:0,6,127	0/0:27,0:12:21.01:0,21,281	0/0:45,0:26:12.04:0,12,436	0/0:22,0:22:53.40:0,53,1053	0/0:7,0:7:12.04:0,12,245	0/0:18,0:18:29.75:0,30,488	1/1:35,0:31:24.87:306,25,0	0/0:10,0:10:20.90:0,21,351	0/0:21,0:21:42.14:0,42,853	0/0:15,0:14:36.12:0,36,711	0/0:25,0:26:63.15:0,63,1190	0/0:12,0:13:26.89:0,27,440	0/0:7,0:7:12.02:0,12,198	0/0:13,0:37:15.47:0,15,27	0/0:19,0:19:39.13:0,39,761	0/0:29,0:29:35.49:0,35,772	0/0:12,0:12:30.10:0,30,588	1/1:6,0:9:18.03:326,18,0	0/1:7,0:19:0.02:0,0,0	0/0:23,21:49:0.47:0,0,1	0/0:3,0:4:5.88:0,6,123	0/0:10,0:10:21.06:0,21,380	0/0:25,0:24:35.95:0,36,593	0/0:12,0:13:18.03:0,18,290	0/0:26,0:26:60.19:0,60,1173	1/1:2,0:9:6.02:157,6,0	0/0:18,0:17:42.14:0,42,888
chr10	103103519	.	GCA	G	5673.15	PASS	AB=0.930;AC=36;AF=0.643;AN=56;BaseQRankSum=8.011;DP=627;FS=3.104;HRun=0;HaplotypeScore=136.1370;InbreedingCoeff=0.3266;MQ=52.83;MQ0=26;MQRankSum=2.225;QD=11.97;ReadPosRankSum=3.933;VQSLOD=4.7090;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,26:35:48.14:562,48,0	1/1:3,6:10:20.73:204,21,0	0/0:40,0:9:7.78:0,8,71	0/0:45,0:14:3.12:0,3,19	0/0:15,1:15:3.92:0,4,461	1/1:5,15:21:48.14:559,48,0	1/1:7,5:15:11.97:136,12,0	0/1:32,2:33:34.20:34,0,270	1/1:3,14:17:33.10:387,33,0	1/1:6,17:23:51.03:606,51,0	0/0:17,1:18:6.97:0,7,559	0/1:23,2:24:19.14:19,0,638	1/1:7,5:12:16.29:178,16,0	1/1:4,12:16:27.08:316,27,0	1/1:8,20:27:50.98:576,51,0	0/1:15,2:17:9.50:10,0,347	0/1:33,3:36:39.23:39,0,546	1/1:4,12:15:33.10:387,33,0	0/1:15,1:12:14.15:14,0,164	0/0:19,0:19:36.84:0,37,458	0/1:39,2:40:22.46:22,0,137	1/1:1,13:14:30.09:352,30,0	1/1:6,16:23:41.91:471,42,0	1/1:8,16:23:32.96:386,33,0	1/1:6,13:20:30.09:351,30,0	0/1:15,3:16:60.32:60,0,480	0/0:14,0:15:19.33:0,19,317	0/1:10,0:9:3.73:4,0,218
chr10	103103917	.	AT	A	6200.76	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=10.429;DP=428;FS=1.387;HRun=9;HaplotypeScore=42.7874;InbreedingCoeff=0.9363;MQ=74.70;MQ0=0;MQRankSum=0.269;QD=21.68;ReadPosRankSum=0.270;VQSLOD=5.2707;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:54.03:494,54,0	1/1:0,5:5:15.01:137,15,0	0/0:12,0:11:1.16:0,1,57	0/0:9,0:7:7.81:0,8,105	0/0:17,0:17:42.12:0,42,481	1/1:5,13:19:38.05:336,38,0	1/1:2,9:11:24.01:220,24,0	1/1:4,27:31:81.02:735,81,0	1/1:2,6:8:18.01:165,18,0	0/0:21,0:21:57.15:0,57,647	0/0:14,0:14:36.07:0,36,401	0/0:9,0:9:27.08:0,27,311	1/1:5,9:14:27.01:247,27,0	1/1:0,14:14:42.02:384,42,0	1/1:1,7:8:18.01:165,18,0	0/0:9,0:9:18.05:0,18,208	1/1:2,20:22:51.02:467,51,0	1/1:2,21:23:54.03:494,54,0	1/1:7,15:22:45.01:412,45,0	1/1:1,10:11:30.01:271,30,0	1/1:3,8:11:18.01:165,18,0	1/1:2,4:6:12:109,12,0	1/1:1,13:14:36.02:329,36,0	1/1:1,6:7:15.01:137,15,0	1/1:2,18:20:54.02:494,54,0	0/0:22,0:22:63.19:0,63,727	1/1:2,17:19:48.02:439,48,0	0/0:28,0:28:84.25:0,84,968
chr10	103104213	.	CT	C	1733.37	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.290;DP=620;FS=2.750;HRun=9;HaplotypeScore=63.1422;InbreedingCoeff=0.9407;MQ=63.17;MQ0=6;MQRankSum=-2.927;QD=17.33;ReadPosRankSum=-1.063;VQSLOD=3.6000;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,99,1120	0/0:10,0:10:21.06:0,21,243	0/0:26,0:10:19.87:0,20,209	0/0:20,0:14:0.51:0,1,144	0/0:25,0:25:63.15:0,63,694	0/0:20,0:20:57.17:0,57,658	0/0:24,0:25:69.04:0,69,776	1/1:7,21:28:59.95:537,60,0	0/0:22,0:21:51.10:0,51,573	0/0:23,1:24:41.23:0,41,654	0/0:19,0:19:33.08:0,33,364	0/0:28,0:27:66.17:0,66,739	0/0:19,0:19:48.09:0,48,529	0/0:20,0:20:54.15:0,54,615	0/0:17,1:18:18.16:0,18,458	0/0:14,0:14:42.09:0,42,463	0/0:33,1:34:59.15:0,59,943	0/0:33,0:33:84.19:0,84,933	1/1:2,11:13:30.01:273,30,0	1/1:2,19:21:41.99:384,42,0	1/1:4,13:17:36.02:329,36,0	0/0:14,0:14:33.09:0,33,372	0/0:14,0:14:42.10:0,42,467	0/0:32,0:32:87.20:0,87,980	0/0:19,0:19:39.12:0,39,450	0/0:22,0:22:51.14:0,51,580	1/1:2,19:21:41.92:384,42,0	0/0:22,0:22:48.14:0,48,554
chr10	103105622	.	GAGTACAGATA	G	18977.61	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=17.405;DP=657;FS=9.997;HRun=0;HaplotypeScore=215.4218;InbreedingCoeff=0.9913;MQ=96.36;MQ0=1;MQRankSum=-19.879;QD=74.42;ReadPosRankSum=2.345;VQSLOD=3.4587;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:72.25:2128,72,0	1/1:2,3:5:9.03:279,9,0	0/0:27,0:27:66.18:0,66,2908	0/0:46,0:46:99:0,126,5746	0/0:22,0:22:66.23:0,66,3473	1/1:2,24:26:69.24:2094,69,0	1/1:3,24:27:63.22:2092,63,0	0/0:31,0:31:81.26:0,81,3693	1/1:1,20:21:57.20:1890,57,0	0/0:31,0:31:90.31:0,90,4655	0/0:19,0:19:51.16:0,51,2300	0/0:24,0:24:72.22:0,72,3115	1/1:1,21:22:56.92:1900,57,0	1/1:0,17:17:45.15:1490,45,0	0/0:40,0:40:99:0,117,5928	0/0:19,0:19:57.20:0,57,2966	1/1:2,16:18:31.82:1008,32,0	1/1:1,11:12:30.10:948,30,0	0/0:19,0:19:57.20:0,57,2744	0/0:19,0:19:54.19:0,54,2704	0/0:32,0:32:90.31:0,90,4792	1/1:1,19:20:54.19:1599,54,0	1/1:2,23:25:60.21:1714,60,0	1/1:3,11:13:21.07:527,21,0	1/1:2,18:20:42.14:1309,42,0	0/0:28,0:28:81.28:0,81,4143	0/0:29,0:29:87.26:0,87,4327	0/0:16,0:16:48.16:0,48,2541
chr10	103105740	.	C	CA	5187.69	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-12.268;DP=656;FS=0.370;HRun=1;HaplotypeScore=68.5178;InbreedingCoeff=0.9969;MQ=80.40;MQ0=0;MQRankSum=-2.034;QD=40.21;ReadPosRankSum=-1.224;VQSLOD=4.8761;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,111,1396	0/0:13,0:13:39.13:0,39,505	0/0:24,0:24:67.74:0,68,822	0/0:35,0:34:87.21:0,87,1054	0/0:11,0:11:30.10:0,30,389	0/0:19,0:19:57.19:0,57,740	0/0:33,0:33:93.28:0,93,1190	1/1:5,21:26:63.21:938,63,0	0/0:25,0:25:69.22:0,69,888	0/0:28,0:27:81.26:0,81,1052	0/0:8,0:8:21.07:0,21,273	0/0:22,0:22:60.19:0,60,779	0/0:16,0:16:48.16:0,48,618	0/0:17,0:17:45.13:0,45,569	0/0:28,0:28:84.26:0,84,1078	0/0:28,0:28:84.27:0,84,1090	0/0:45,0:45:99:0,132,1697	0/0:29,0:29:84.27:0,84,1090	1/1:1,19:20:60.18:858,60,0	1/1:1,20:21:57.15:829,57,0	1/1:0,39:39:99:1619,108,0	0/0:17,0:17:48.16:0,48,623	0/0:7,0:7:18.06:0,18,234	0/0:33,0:33:90.28:0,90,1153	0/0:19,0:19:51.17:0,51,659	0/0:18,0:18:54.16:0,54,686	1/1:0,23:23:63.21:944,63,0	0/0:10,0:10:30.10:0,30,389
chr10	103106150	.	ATTT	A	9993.15	PASS	AB=0.535;AC=37;AF=0.661;AN=56;BaseQRankSum=6.302;DP=578;FS=3.156;HRun=13;HaplotypeScore=107.0305;InbreedingCoeff=0.8781;MQ=64.41;MQ0=7;MQRankSum=-3.511;QD=24.49;ReadPosRankSum=3.226;VQSLOD=4.2283;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,28:38:72.12:875,72,0	1/1:2,9:11:27.06:328,27,0	0/0:29,0:10:18.01:0,18,208	0/0:15,0:8:7.20:0,7,59	0/0:16,0:15:39.12:0,39,702	1/1:2,15:18:40.44:508,40,0	1/1:4,21:26:60.05:711,60,0	1/1:7,17:24:26.76:575,27,0	1/1:4,20:24:54.13:657,54,0	0/0:26,0:28:72.16:0,72,1232	0/0:11,0:11:24.08:0,24,448	0/0:20,0:21:51.17:0,51,934	1/1:5,8:13:18.01:219,18,0	1/1:4,18:22:45.09:547,45,0	0/1:3,1:22:14.79:15,0,22	0/0:16,0:18:42.12:0,42,744	1/1:5,26:32:70.49:854,70,0	1/1:3,19:22:54.07:624,54,0	1/1:7,18:25:54.11:655,54,0	1/1:3,13:16:33.06:401,33,0	1/1:6,12:18:17.96:219,18,0	1/1:3,10:13:27.01:328,27,0	1/1:1,16:18:48.07:565,48,0	1/1:3,20:23:57.16:693,57,0	1/1:0,21:23:58.45:708,58,0	0/0:24,0:24:54.13:0,54,934	1/1:1,18:19:42.12:511,42,0	0/0:3,0:3:3.01:0,3,58
chr10	103106831	.	TA	T	2097.80	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.177;DP=558;FS=3.676;HRun=11;HaplotypeScore=57.0033;InbreedingCoeff=0.8983;MQ=69.89;MQ0=1;MQRankSum=0.592;QD=15.20;ReadPosRankSum=-0.434;VQSLOD=4.0768;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,1:30:59.63:0,60,825	0/0:9,0:9:24.06:0,24,256	0/0:15,0:14:20.45:0,20,168	0/0:12,0:8:7.54:0,8,119	0/0:38,0:38:96.24:0,96,1020	0/0:14,0:14:33.07:0,33,344	0/0:19,0:19:45.11:0,45,480	1/1:10,27:37:51.19:613,51,0	0/0:18,0:18:42.08:0,42,432	0/0:17,0:17:35.92:0,36,366	0/0:10,0:11:29.91:0,30,302	0/0:17,1:18:20.50:0,20,423	0/0:14,0:14:36.09:0,36,384	0/0:13,0:13:26.27:0,26,287	0/0:20,0:20:40.18:0,40,165	0/0:13,0:13:36.09:0,36,384	0/0:26,0:26:72.18:0,72,767	0/0:17,2:19:4.85:0,5,463	1/1:6,14:20:12.93:310,13,0	1/1:1,28:29:80.85:659,81,0	1/1:3,13:17:3.15:214,3,0	0/0:18,1:19:20.47:0,20,421	0/0:21,0:21:44.51:0,45,474	0/0:14,0:14:14.48:0,14,359	0/0:16,0:16:36.07:0,36,374	0/0:29,0:29:71.65:0,72,732	1/1:10,25:35:55.58:466,56,0	0/0:14,0:14:39.10:0,39,416
chr10	103106839	.	A	AT	517.45	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.415;DP=529;FS=8.769;HRun=0;HaplotypeScore=61.1941;InbreedingCoeff=0.9302;MQ=66.37;MQ0=1;MQRankSum=-0.414;QD=25.87;ReadPosRankSum=2.055;VQSLOD=4.3069;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.20:0,90,1166	0/0:8,0:8:24.08:0,24,334	0/0:9,0:7:19.46:0,19,222	0/0:15,0:10:8.38:0,8,146	0/0:34,0:34:99:0,102,1390	0/0:14,0:14:42.10:0,42,521	0/0:21,0:21:63.15:0,63,785	0/0:37,0:37:99:0,110,806	0/0:16,0:16:48.12:0,48,606	0/0:14,0:14:39.12:0,39,529	0/0:14,0:14:39.04:0,39,476	0/0:17,0:17:51.09:0,51,656	0/0:13,0:13:39.12:0,39,528	0/0:10,0:10:30.10:0,30,407	1/1:0,20:20:45.15:612,45,0	0/0:15,0:15:42.12:0,42,554	0/0:26,0:26:78.23:0,78,1050	0/0:21,0:21:63.06:0,63,782	0/0:18,0:18:50.41:0,50,360	0/0:29,0:29:85.75:0,86,554	0/0:15,0:15:35.48:0,35,247	0/0:15,0:15:45.10:0,45,604	0/0:20,0:20:60.16:0,60,768	0/0:13,0:13:39.08:0,39,520	0/0:14,0:14:39.10:0,39,507	0/0:29,0:29:83.79:0,84,1080	0/0:27,0:27:62.17:0,62,415	0/0:14,0:14:42.13:0,42,568
chr10	103110037	.	TG	T	12209.94	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=13.260;DP=672;FS=0.582;HRun=1;HaplotypeScore=66.7903;InbreedingCoeff=0.9999;MQ=83.31;MQ0=0;MQRankSum=-4.261;QD=39.90;ReadPosRankSum=5.304;VQSLOD=5.1395;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:87.28:1203,87,0	1/1:0,11:11:33.11:462,33,0	0/0:32,0:32:61.91:0,62,1359	0/0:29,0:29:81.25:0,81,1188	0/0:33,0:33:99:0,99,1553	1/1:0,26:26:78.26:1091,78,0	1/1:0,26:26:72.24:1007,72,0	0/0:27,0:27:78.26:0,78,1224	1/1:0,19:19:54.18:755,54,0	0/0:24,0:24:69.24:0,69,1103	0/0:14,0:14:42.13:0,42,646	0/0:25,0:25:75.26:0,75,1198	1/1:1,21:22:63.21:877,63,0	1/1:0,15:15:39.13:546,39,0	0/0:39,0:39:99:0,117,1864	0/0:20,0:20:60.20:0,60,957	1/1:0,34:34:96.32:1343,96,0	1/1:0,23:23:66.22:923,66,0	0/0:19,0:19:57.19:0,57,881	0/0:24,0:24:72.25:0,72,1147	0/0:21,0:21:60.20:0,60,959	1/1:0,28:28:81.27:1132,81,0	1/1:0,19:19:57.19:796,57,0	1/1:0,25:25:69.23:965,69,0	1/1:0,27:27:81.23:1111,81,0	0/0:24,0:24:69.24:0,69,1103	0/0:23,0:23:69.24:0,69,1099	0/0:12,0:12:36.12:0,36,575
chr10	103110728	.	C	CA	3720.82	PASS	AB=0.794;AC=37;AF=0.661;AN=56;BaseQRankSum=-0.838;DP=452;FS=11.362;HRun=12;HaplotypeScore=52.4414;InbreedingCoeff=0.4051;MQ=53.65;MQ0=13;MQRankSum=-3.459;QD=10.03;ReadPosRankSum=0.176;VQSLOD=1.3630;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,20:30:4.39:365,4,0	0/1:6,4:10:9.88:76,0,10	0/0:8,0:6:7.99:0,8,71	0/1:9,0:8:31.81:32,0,47	0/1:11,1:11:9.28:9,0,95	1/1:5,11:17:1.29:206,1,0	1/1:6,13:19:14.15:299,14,0	1/1:9,3:20:34.91:226,35,0	0/1:7,8:14:0.87:154,0,1	0/0:22,1:23:25.59:0,26,333	0/0:14,0:14:29.81:0,30,218	0/0:8,0:8:8.91:0,9,66	1/1:1,7:8:15.02:145,15,0	1/1:1,14:14:24.03:229,24,0	1/1:4,1:10:14.52:97,15,0	0/0:8,0:7:17.89:0,18,131	1/1:5,22:27:51.08:496,51,0	1/1:2,19:20:20.16:358,20,0	1/1:10,1:13:20.08:118,20,0	1/1:7,1:10:11.36:57,11,0	1/1:4,0:10:11.36:57,11,0	0/1:3,7:9:6.88:102,0,7	0/1:7,3:8:12.89:50,0,13	1/1:10,15:26:23:370,23,0	1/1:2,7:9:15.02:146,15,0	0/0:19,0:19:29.80:0,30,219	1/1:9,1:20:8.94:108,9,0	0/1:19,2:19:23.82:24,0,168
chr10	103110936	.	TA	T	3625.85	PASS	AB=0.823;AC=27;AF=0.482;AN=56;BaseQRankSum=1.176;DP=426;FS=0.852;HRun=11;HaplotypeScore=50.2105;InbreedingCoeff=0.8305;MQ=55.41;MQ0=13;MQRankSum=1.869;QD=16.71;ReadPosRankSum=4.808;VQSLOD=4.1715;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,33:38:86.88:714,87,0	1/1:0,4:5:11.03:80,11,0	0/1:3,0:2:0.84:1,0,12	0/0:2,0:2:6.01:0,6,60	0/1:11,1:12:0.62:1,0,188	1/1:4,21:24:56.92:468,57,0	1/1:0,10:11:26.01:203,26,0	0/0:11,0:25:52.17:0,52,285	1/1:1,10:11:26.95:222,27,0	0/0:21,0:21:48.11:0,48,505	0/0:14,0:14:30.06:0,30,312	0/0:13,0:13:30.08:0,30,320	1/1:3,19:22:56.91:468,57,0	0/1:2,10:12:1.99:192,0,2	0/0:14,0:15:38.85:0,39,371	0/0:12,0:12:33.08:0,33,351	1/1:4,13:17:34.99:277,35,0	1/1:2,11:12:29.01:227,29,0	0/0:5,0:17:40.24:0,40,220	0/0:2,0:14:28.56:0,29,147	0/0:0,0:12:31.43:0,31,161	1/1:0,5:5:14.98:123,15,0	1/1:3,9:13:22.93:178,23,0	1/1:4,11:13:2.44:227,2,0	1/1:2,11:13:29.95:246,30,0	0/0:20,0:18:51.11:0,51,535	0/0:5,0:18:42.53:0,43,227	0/0:19,0:18:54.14:0,54,576
chr10	103112409	.	AACACACAC	A	1069.13	PASS	AB=0.884;AC=22;AF=0.423;AN=52;BaseQRankSum=4.390;DP=540;FS=0.000;HRun=0;HaplotypeScore=131.6363;InbreedingCoeff=0.5846;MQ=67.11;MQ0=15;MQRankSum=-5.410;QD=4.86;ReadPosRankSum=-0.931;VQSLOD=2.2200;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:26.61:0,27,362	1/1:4,0:4:3.01:56,3,0	./.	./.	0/0:15,0:15:11.68:0,12,427	1/1:13,9:22:12.04:279,12,0	1/1:15,5:19:3.01:75,3,0	0/0:20,0:17:12.93:0,13,380	1/1:11,8:20:18:374,18,0	0/0:25,0:25:33.09:0,33,906	0/0:13,0:13:18.06:0,18,627	0/0:18,0:18:14.92:0,15,398	1/1:7,4:11:3.01:75,3,0	1/1:6,5:11:11.95:170,12,0	0/0:14,0:19:5.95:0,6,123	0/0:17,0:18:24.08:0,24,778	1/1:21,3:24:0.47:1,0,0	0/1:12,0:14:3.83:4,0,100	0/0:15,0:16:9.92:0,10,309	0/1:12,0:11:0:0,0,0	0/0:30,0:27:15.50:0,16,437	0/1:16,0:21:0.02:0,0,0	1/1:5,0:10:0.30:2,0,0	1/1:26,9:33:6.02:149,6,0	0/1:12,0:13:43.85:44,0,55	0/0:25,0:25:32.32:0,32,934	0/0:15,0:14:15.05:0,15,501	0/0:5,0:4:9.03:0,9,327
chr10	103114234	.	C	CCA	2829.69	PASS	AB=0.538;AC=9;AF=0.161;AN=56;BaseQRankSum=-10.678;DP=577;FS=13.447;HRun=0;HaplotypeScore=91.1213;InbreedingCoeff=0.8557;MQ=73.97;MQ0=13;MQRankSum=0.406;QD=26.20;ReadPosRankSum=-1.698;VQSLOD=3.5977;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:66.05:0,66,730	0/0:13,0:12:33.08:0,33,393	0/0:47,0:32:53.32:0,53,584	0/0:39,0:32:30.15:0,30,420	0/0:13,0:12:33.10:0,33,408	0/0:10,0:10:21.07:0,21,259	0/0:22,0:22:51.15:0,51,621	1/1:10,16:26:45.09:656,45,0	0/0:17,0:17:45.12:0,45,542	0/0:17,0:16:39.06:0,39,443	0/0:12,0:12:30.09:0,30,372	0/0:20,0:18:48.06:0,48,548	0/0:12,0:11:26.89:0,27,294	0/0:23,0:23:51.13:0,51,616	0/0:16,0:18:47.80:0,48,537	0/0:13,0:13:33.09:0,33,397	0/0:42,0:41:99:0,105,1288	0/0:21,0:21:57.10:0,57,673	1/1:6,10:14:30.10:487,30,0	0/1:2,12:14:4.11:425,0,4	1/1:12,35:45:84.29:1369,84,0	0/0:9,0:9:21.07:0,21,259	0/0:15,0:15:36.11:0,36,446	0/0:39,0:38:93.25:0,93,1123	0/0:10,0:9:27.02:0,27,302	0/0:22,0:22:60.17:0,60,723	1/1:2,3:5:3.01:49,3,0	0/0:7,0:7:20.10:0,20,194
chr10	103114794	.	TGGGG	T	7695.77	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=1.470;DP=456;FS=9.827;HRun=13;HaplotypeScore=86.8501;InbreedingCoeff=0.9065;MQ=69.28;MQ0=0;MQRankSum=-2.313;QD=27.68;ReadPosRankSum=10.267;VQSLOD=1.8413;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:29:69.14:1002,69,0	1/1:3,7:10:12.03:159,12,0	0/0:18,0:17:32.47:0,32,501	0/0:15,0:9:16.88:0,17,279	0/0:1,0:2:2.57:0,3,37	1/1:6,9:15:23.63:278,24,0	1/1:7,23:30:50.72:680,51,0	0/0:7,0:7:15.05:0,15,298	1/1:1,19:21:46.35:637,46,0	0/0:7,0:8:12.53:0,13,234	0/0:7,0:9:6.47:0,6,90	0/0:12,0:13:21.07:0,21,440	1/1:6,17:23:45.10:658,45,0	1/1:4,17:21:39.06:569,39,0	0/0:5,0:15:20.59:0,21,146	0/0:8,0:10:15.05:0,15,321	1/1:2,30:32:72.24:1053,72,0	1/1:2,36:38:84.24:1229,84,0	0/0:7,0:8:15.05:0,15,268	0/0:4,0:5:6.02:0,6,81	0/0:29,0:32:34.94:0,35,611	1/1:7,7:14:17.93:224,18,0	1/1:1,5:6:9.01:131,9,0	1/1:4,27:31:63.06:921,63,0	1/1:0,8:8:12:152,12,0	0/0:12,0:12:18.05:0,18,298	0/0:17,0:17:21.07:0,21,392	0/0:5,0:6:9.03:0,9,168
chr10	103115214	.	TA	T	2064.83	PASS	AB=0.808;AC=29;AF=0.518;AN=56;BaseQRankSum=2.451;DP=542;FS=5.549;HRun=15;HaplotypeScore=69.1968;InbreedingCoeff=0.7349;MQ=69.77;MQ0=1;MQRankSum=0.813;QD=7.32;ReadPosRankSum=6.028;VQSLOD=2.7376;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:22:42.43:261,42,0	1/1:2,4:7:11.79:77,12,0	0/0:16,1:12:4.88:0,5,16	0/0:14,0:12:11.44:0,11,103	0/0:20,3:24:13.55:0,14,222	1/1:4,12:21:45.55:260,46,0	0/1:5,5:10:5.24:46,0,5	0/0:28,0:34:48.89:0,49,326	1/1:3,10:15:33.58:204,34,0	0/0:34,1:35:29.95:0,30,373	0/1:20,2:24:0.04:0,0,138	0/0:20,0:22:26.77:0,27,211	1/1:6,8:15:22.66:140,23,0	1/1:9,3:12:4.93:37,5,0	1/1:5,0:14:11.48:33,11,0	0/0:11,1:12:1.71:0,2,133	1/1:8,16:25:14.95:223,15,0	1/1:6,13:19:25.65:171,26,0	0/0:8,0:16:23.35:0,23,145	0/0:4,0:16:32.37:0,32,180	0/0:14,0:22:33.72:0,34,198	1/1:4,9:15:21.63:127,22,0	1/1:5,10:16:6.67:150,7,0	1/1:5,16:24:47.38:287,47,0	1/1:9,12:23:39.37:242,39,0	0/0:26,4:31:10.17:0,10,315	0/0:8,0:17:17.46:0,17,108	0/1:17,3:20:15.38:15,0,242
chr10	103115486	.	T	TGTTCTG	32142.44	PASS	AB=0.938;AC=39;AF=0.696;AN=56;BaseQRankSum=-7.902;DP=640;FS=6.774;HRun=0;HaplotypeScore=128.3264;InbreedingCoeff=0.9148;MQ=77.73;MQ0=0;MQRankSum=-18.194;QD=72.89;ReadPosRankSum=-0.025;VQSLOD=5.0540;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,23:32:90.25:2793,90,0	1/1:1,7:10:24.08:740,24,0	0/0:23,0:23:63.14:0,63,1247	0/0:20,0:20:45.10:0,45,925	0/0:17,0:17:51.18:0,51,1165	1/1:4,19:23:60.20:1992,60,0	1/1:7,24:32:81.28:2653,81,0	1/1:16,15:37:93.26:2667,93,0	1/1:5,14:20:42.08:1376,42,0	0/0:28,0:28:84.27:0,84,1858	0/0:27,0:27:72.23:0,72,1571	0/0:31,0:31:90.31:0,90,2076	1/1:2,14:19:45.15:1500,45,0	1/1:3,16:20:57.20:1875,57,0	1/1:3,19:24:60.20:2043,60,0	0/1:14,1:15:60.50:61,0,866	1/1:5,17:24:39.13:1268,39,0	1/1:4,11:16:33.11:1112,33,0	1/1:6,17:25:72.20:2392,72,0	1/1:1,9:11:27.09:918,27,0	1/1:14,14:29:51.17:1500,51,0	1/1:3,14:18:42.14:1310,42,0	1/1:4,8:13:33.11:986,33,0	1/1:6,20:27:48.16:1568,48,0	1/1:6,6:12:27.09:802,27,0	0/0:37,0:37:99:0,105,2382	1/1:4,25:34:74.95:2585,75,0	0/0:16,0:16:48.16:0,48,1119
chr10	103117166	.	TG	T	12334.75	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=13.177;DP=649;FS=2.446;HRun=1;HaplotypeScore=66.3631;InbreedingCoeff=0.9958;MQ=83.61;MQ0=0;MQRankSum=-7.280;QD=38.19;ReadPosRankSum=3.575;VQSLOD=5.5653;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,49:49:99:1930,138,0	1/1:0,4:4:12.04:167,12,0	0/0:23,0:23:69.21:0,69,1009	0/0:20,0:20:54.09:0,54,753	0/0:17,0:17:48.16:0,48,767	1/1:1,20:21:54.18:755,54,0	1/1:0,18:18:51.17:713,51,0	0/0:32,0:32:96.31:0,96,1493	1/1:0,29:29:72.24:1007,72,0	0/0:28,0:28:84.27:0,84,1296	0/0:14,0:14:42.13:0,42,648	0/0:27,0:27:81.28:0,81,1293	1/1:0,28:28:69.18:965,69,0	1/1:0,25:25:66.22:922,66,0	1/1:0,26:26:78.26:1091,78,0	0/0:25,0:25:75.26:0,75,1199	1/1:0,25:25:72.24:1007,72,0	1/1:0,21:21:57.19:797,57,0	0/0:28,0:27:81.25:0,81,1270	0/0:12,0:12:36.12:0,36,576	0/0:21,0:21:63.21:0,63,1005	1/1:0,19:19:51.17:713,51,0	1/1:0,15:15:42.14:587,42,0	1/1:0,24:24:72.24:1007,72,0	1/1:0,19:19:48.16:671,48,0	0/0:29,0:29:87.30:0,87,1386	0/0:33,0:33:96.31:0,96,1510	0/0:17,0:17:51.16:0,51,791
chr10	103117941	.	G	GA	7846.18	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-3.070;DP=634;FS=1.007;HRun=7;HaplotypeScore=72.4497;InbreedingCoeff=0.9968;MQ=71.28;MQ0=0;MQRankSum=-0.558;QD=29.17;ReadPosRankSum=3.360;VQSLOD=5.4056;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:35:90.27:1074,90,0	1/1:0,11:12:33.10:397,33,0	0/0:10,0:10:21.03:0,21,199	0/0:12,0:11:15.01:0,15,220	0/0:31,0:31:87.13:0,87,840	1/1:0,24:24:66.20:797,66,0	1/1:5,26:31:69.20:824,69,0	0/0:32,0:32:90.14:0,90,869	1/1:0,16:16:45.14:544,45,0	0/0:39,0:39:99:0,102,980	0/0:9,0:9:24.01:0,24,224	0/0:28,0:28:72.08:0,72,688	1/1:3,19:22:48.15:580,48,0	1/1:5,21:26:57.17:688,57,0	0/0:33,0:33:93.14:0,93,898	0/0:13,0:13:33.05:0,33,319	0/0:28,1:29:40.75:0,41,686	1/1:1,22:23:66.20:796,66,0	0/0:13,0:13:39.05:0,39,372	0/0:27,0:27:66.05:0,66,636	0/0:28,0:28:75.06:0,75,709	1/1:2,15:18:41.99:482,42,0	1/1:5,19:24:48.15:579,48,0	1/1:1,20:21:54.17:652,54,0	1/1:2,15:16:36.11:432,36,0	0/0:26,0:26:75.12:0,75,724	0/0:21,0:21:57.02:0,57,526	0/0:14,0:14:42.07:0,42,406
chr10	103118249	.	TAC	T	1436.45	PASS	AB=0.949;AC=27;AF=0.482;AN=56;BaseQRankSum=6.497;DP=693;FS=23.591;HRun=0;HaplotypeScore=171.3975;InbreedingCoeff=0.3945;MQ=47.50;MQ0=13;MQRankSum=-1.715;QD=3.40;ReadPosRankSum=3.378;VQSLOD=0.8145;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:32.54:33,0,58	0/0:13,0:13:2.95:0,3,19	0/0:23,0:13:17.85:0,18,217	0/0:31,0:19:15.08:0,15,101	0/0:22,0:22:53.69:0,54,812	1/1:11,0:10:2.97:21,3,0	1/1:40,0:36:15.50:125,15,0	0/1:23,5:26:3.02:283,0,3	1/1:24,0:22:3.73:22,4,0	0/0:28,0:27:54.65:0,55,834	0/0:10,0:10:18.06:0,18,286	0/0:40,1:41:74.84:0,75,1579	0/1:26,0:24:1.91:85,0,2	1/1:23,0:20:2.96:19,3,0	0/0:15,0:15:2.74:0,3,12	0/0:21,0:21:51.12:0,51,762	0/0:34,0:34:3.13:0,3,65	1/1:16,0:16:9.78:92,10,0	0/1:20,3:20:30.84:152,0,31	1/1:6,9:15:12.04:144,12,0	1/1:21,55:73:34.79:404,35,0	0/1:18,0:17:0:0,0,0	1/1:21,0:21:3.39:22,3,0	0/1:25,0:23:13.99:34,0,14	1/1:18,0:18:2.96:19,3,0	0/0:32,0:32:66.22:0,66,1032	1/1:3,7:10:11.81:144,12,0	0/1:18,2:19:17.67:18,0,689
chr10	103118260	.	A	ACGCGCGCG	111.70	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=3.875;DP=692;FS=5.059;HRun=0;HaplotypeScore=232.0914;InbreedingCoeff=0.4115;MQ=42.61;MQ0=14;MQRankSum=-3.583;QD=4.47;ReadPosRankSum=-2.046;VQSLOD=1.9466;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:30.03:0,30,661	0/0:15,0:14:9.93:0,10,170	0/0:20,0:9:27.07:0,27,654	0/0:26,0:12:32.98:0,33,779	0/0:23,0:23:66.21:0,66,1781	0/0:11,0:9:8.97:0,9,225	0/0:41,1:37:29.93:0,30,832	0/0:28,0:26:66.18:0,66,1365	0/0:21,0:19:12.04:0,12,278	0/0:25,0:23:62:0,62,1692	0/0:9,0:9:24.08:0,24,657	0/0:43,0:43:99:0,123,3454	0/0:29,1:28:34.41:0,34,563	0/0:26,0:23:12.93:0,13,223	1/1:9,1:10:2.99:131,3,0	0/0:20,0:20:57.20:0,57,1627	0/0:28,0:28:38.80:0,39,368	0/1:15,0:15:72.30:72,0,766	0/0:27,0:24:43.86:0,44,1040	0/0:17,0:16:11.27:0,11,251	0/0:77,0:72:36.12:0,36,747	0/0:18,0:17:0.34:0,0,1	0/0:20,0:19:14.77:0,15,362	0/0:22,2:21:15.05:0,15,384	0/0:21,1:21:6.49:0,6,157	0/0:29,0:29:81.26:0,81,2228	0/0:13,0:12:25.28:0,25,426	0/0:23,0:22:63.20:0,63,1682
chr10	103118267	.	CACAT	C	479.96	PASS	AB=0.981;AC=22;AF=0.393;AN=56;BaseQRankSum=1.245;DP=698;FS=3.962;HRun=0;HaplotypeScore=185.4811;InbreedingCoeff=0.1954;MQ=40.58;MQ0=18;MQRankSum=-3.073;QD=1.33;ReadPosRankSum=-6.066;VQSLOD=0.7787;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:29,1:30:36.11:36,0,52	1/1:14,1:14:3.47:26,3,0	0/0:20,0:8:8.88:0,9,228	0/1:29,0:11:23.70:24,0,73	0/0:23,0:23:41.94:0,42,1158	1/1:11,0:9:2.83:24,3,0	1/1:40,0:34:19.15:142,19,0	0/0:26,0:24:19.84:0,20,276	0/1:22,1:21:12.68:18,0,13	0/0:28,0:26:72.09:0,72,1366	0/0:12,0:12:27.03:0,27,547	0/0:41,0:41:99:0,109,2580	0/1:27,1:26:24.63:69,0,25	0/0:26,0:23:0.16:0,0,2	0/0:11,0:11:3.45:0,3,21	0/0:19,0:19:54.17:0,54,1305	0/1:19,0:19:26.72:84,0,27	0/1:15,0:15:8.57:61,0,9	0/1:25,0:23:1.75:2,0,254	0/1:19,0:18:3.22:3,0,53	0/0:80,0:75:34.25:0,34,243	0/1:19,1:19:0.13:0,0,0	1/1:20,1:20:11.57:99,12,0	1/1:23,0:20:2.62:24,3,0	1/1:28,0:27:1.58:22,2,0	0/0:28,0:28:84.21:0,84,1748	0/1:14,0:13:7.82:8,0,113	0/0:23,0:22:60.13:0,60,1384
chr10	103118269	.	CAT	C	1899.78	PASS	AB=0.921;AC=30;AF=0.536;AN=56;BaseQRankSum=6.384;DP=686;FS=6.265;HRun=0;HaplotypeScore=164.2349;InbreedingCoeff=0.3889;MQ=40.42;MQ0=19;MQRankSum=-3.474;QD=3.94;ReadPosRankSum=-3.476;VQSLOD=1.8429;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,6:29:3.92:146,0,4	1/1:10,5:14:3.47:26,3,0	0/0:19,0:7:8.67:0,9,170	0/1:32,0:11:17.70:18,0,116	0/0:22,0:22:18.11:0,18,819	1/1:6,5:9:6:71,6,0	1/1:21,19:34:35.81:407,36,0	0/1:21,1:20:28.13:28,0,130	0/1:13,9:20:9.46:61,0,9	0/0:28,0:26:72.09:0,72,1049	0/0:11,0:11:27.03:0,27,417	0/0:42,0:42:92.99:0,93,1853	1/1:14,12:24:11.27:255,11,0	1/1:18,8:23:3.32:45,3,0	0/0:11,0:11:3.48:0,3,31	0/0:19,0:19:54.16:0,54,951	0/1:19,0:19:9.36:60,0,9	1/1:9,6:15:27.44:309,27,0	0/1:21,0:20:49.10:49,0,146	1/1:18,0:17:10.88:48,11,0	1/1:78,1:75:25.50:149,25,0	0/1:17,3:19:0.14:0,0,0	1/1:18,3:20:15:146,15,0	1/1:13,10:20:9.02:116,9,0	1/1:23,5:27:6.01:68,6,0	0/0:28,0:28:84.19:0,84,1302	0/1:14,0:13:10.78:87,0,11	0/0:23,0:22:28.55:0,29,918
chr10	103118293	.	CAT	C	480.01	PASS	AB=0.782;AC=19;AF=0.339;AN=56;BaseQRankSum=7.718;DP=642;FS=5.091;HRun=0;HaplotypeScore=162.5296;InbreedingCoeff=0.3728;MQ=39.67;MQ0=16;MQRankSum=-5.593;QD=1.46;ReadPosRankSum=-3.112;VQSLOD=1.7951;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,7:19:0.15:0,0,0	0/1:18,3:20:18.21:26,0,18	0/0:34,1:6:12.95:0,13,282	0/0:42,0:9:24.08:0,24,456	0/0:15,0:15:20.10:0,20,625	0/0:7,5:11:5.02:0,5,20	1/1:11,14:21:2.83:45,3,0	0/0:15,0:14:19.25:0,19,123	0/0:13,7:20:8.50:0,8,57	0/0:27,0:26:78.18:0,78,1239	0/0:8,0:8:21.07:0,21,404	0/0:34,0:34:99:0,99,1806	0/1:17,8:25:33.81:150,0,34	1/1:23,4:24:1.45:3,1,0	0/0:15,3:17:3.48:0,3,40	0/0:20,0:20:60.19:0,60,1117	0/1:14,4:18:83.92:84,0,84	1/1:13,4:17:14.76:165,15,0	0/0:16,0:14:14.20:0,14,183	1/1:19,0:18:5.98:46,6,0	1/1:58,1:56:3.15:26,3,0	0/1:14,4:17:0:0,0,0	0/1:9,3:12:0:0,0,0	0/1:10,9:16:0.10:0,0,0	0/1:23,13:35:0.10:0,0,0	0/0:32,0:32:76.05:0,76,1601	0/1:11,3:14:53.92:79,0,54	0/0:19,0:19:57.10:0,57,905
chr10	103118295	.	T	TGC	259.04	PASS	AB=0.923;AC=15;AF=0.288;AN=52;BaseQRankSum=6.029;DP=627;FS=0.000;HRun=0;HaplotypeScore=161.0712;InbreedingCoeff=0.2513;MQ=39.59;MQ0=14;MQRankSum=-5.154;QD=1.17;ReadPosRankSum=-2.083;VQSLOD=2.2863;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,1:18:0:0,0,0	0/1:18,2:19:23.30:43,0,23	0/0:35,0:6:15.05:0,15,244	0/0:42,0:9:24.08:0,24,391	0/0:13,0:13:39.10:0,39,584	0/1:11,1:11:3.15:3,0,19	0/0:21,2:19:2.65:0,3,11	0/1:12,0:11:15.58:16,0,168	1/1:14,5:19:8.51:172,9,0	0/0:27,0:26:78.12:0,78,1155	0/0:8,0:8:21.07:0,21,341	0/0:34,0:34:99:0,99,1563	0/1:20,4:24:23.35:57,0,23	0/1:25,1:23:0:0,0,1	1/1:15,0:17:2.94:18,3,0	0/0:21,0:21:60.20:0,60,959	0/1:17,3:21:58.67:59,0,154	0/0:16,0:16:20.15:0,20,138	0/0:16,0:14:9.18:0,9,193	1/1:19,0:18:2.95:20,3,0	0/0:53,0:50:0.66:0,1,3	./.	./.	0/1:16,3:17:0:0,0,0	0/0:34,5:38:0:0,0,0	0/0:31,0:31:93.27:0,93,1398	0/1:13,0:13:0.24:0,0,23	0/0:18,0:18:54.12:0,54,777
chr10	103118300	.	ACG	A	134.04	PASS	AB=0.984;AC=17;AF=0.340;AN=50;BaseQRankSum=8.309;DP=633;FS=4.210;HRun=0;HaplotypeScore=161.6761;InbreedingCoeff=0.3016;MQ=39.40;MQ0=14;MQRankSum=-6.684;QD=0.45;ReadPosRankSum=-2.555;VQSLOD=2.0517;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,1:18:0:0,0,0	0/1:22,0:21:14.49:28,0,14	0/0:40,0:7:15.75:0,16,243	0/0:45,0:9:24:0,24,393	0/0:14,0:14:21.13:0,21,624	0/0:14,0:13:2.83:0,3,24	1/1:25,0:21:2.40:9,2,0	0/0:11,0:11:16.51:0,17,189	1/1:16,0:17:5.03:13,5,0	0/0:25,0:25:73.06:0,73,1251	0/0:9,0:9:24.08:0,24,419	0/0:34,0:34:96.33:0,96,1745	0/1:23,1:24:0.19:33,0,0	1/1:18,2:20:1.34:3,1,0	./.	0/0:22,0:22:65.74:0,66,1102	0/0:24,0:24:6.39:0,6,148	0/1:13,0:13:41.20:41,0,58	0/1:17,0:15:23.97:24,0,202	1/1:20,0:19:2.88:25,3,0	0/1:50,0:47:0.04:1,0,0	./.	./.	0/1:19,1:17:0:0,0,0	0/1:39,0:37:0.10:0,0,0	0/0:29,0:29:84.23:0,84,1489	0/1:14,0:14:45.25:87,0,45	0/0:16,0:16:47.32:0,47,829
chr10	103118302	.	GCA	G	85.79	PASS	AB=0.985;AC=14;AF=0.269;AN=52;BaseQRankSum=5.778;DP=636;FS=1.028;HRun=0;HaplotypeScore=164.9544;InbreedingCoeff=0.2792;MQ=39.23;MQ0=14;MQRankSum=-4.776;QD=0.30;ReadPosRankSum=-1.687;VQSLOD=2.1552;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:0.15:0,0,0	0/1:23,0:23:1.79:2,0,56	0/0:40,0:7:12.89:0,13,204	0/0:46,0:9:21.04:0,21,337	0/0:13,0:13:36.12:0,36,636	0/0:12,1:12:2.83:0,3,19	1/1:27,0:23:2.76:27,3,0	0/0:9,0:10:25.14:0,25,292	0/0:19,0:19:8.54:0,9,45	0/0:25,0:25:72.21:0,72,1179	0/0:9,0:9:24.06:0,24,374	0/0:35,0:35:99:0,102,1601	0/1:25,0:25:9.22:77,0,9	1/1:23,0:21:0.60:1,1,0	0/1:18,0:17:0:0,0,0	0/0:22,0:22:60.16:0,60,1026	0/0:24,0:24:1.05:0,1,121	0/1:12,2:14:45.06:45,0,78	0/0:16,0:14:24.07:0,24,293	0/1:22,0:21:0.07:0,0,0	0/1:45,0:42:0.05:0,0,0	./.	./.	0/1:20,0:17:0:0,0,0	0/1:38,1:37:0.10:0,0,0	0/0:28,0:28:81.25:0,81,1386	0/1:14,0:14:37.85:38,0,114	0/0:16,0:16:45.15:0,45,803
chr10	103118306	.	ACG	A	144.77	PASS	AB=0.961;AC=17;AF=0.354;AN=48;BaseQRankSum=8.161;DP=610;FS=2.805;HRun=0;HaplotypeScore=153.8006;InbreedingCoeff=0.3285;MQ=39.14;MQ0=14;MQRankSum=-8.188;QD=0.52;ReadPosRankSum=-2.407;VQSLOD=2.5312;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:0:0,0,0	0/1:21,0:20:9.24:13,0,9	0/0:40,0:8:2.87:0,3,145	0/0:47,0:10:18.04:0,18,267	0/0:12,0:12:36.12:0,36,633	0/0:12,0:11:0.76:0,1,2	1/1:25,2:23:2.39:9,2,0	0/0:10,0:10:17.92:0,18,164	1/1:19,0:19:6.55:17,7,0	0/0:25,0:25:63.19:0,63,1040	0/0:7,0:7:18.05:0,18,299	0/0:34,0:34:84.21:0,84,1406	1/1:24,0:23:3.65:45,4,0	1/1:23,0:21:0.88:2,1,0	0/1:17,0:16:0:0,0,0	0/0:19,0:19:54.18:0,54,970	0/1:21,3:24:21.97:76,0,22	0/1:13,0:13:16.28:44,0,16	0/0:16,0:15:17.30:0,17,199	./.	1/1:38,0:35:0.43:2,0,0	./.	./.	./.	0/1:35,2:37:0.10:0,0,0	0/0:27,0:27:78.23:0,78,1280	0/1:13,1:14:61.93:62,0,99	0/0:15,0:15:45.13:0,45,790
chr10	103118308	.	G	GCA	194.87	PASS	AB=0.974;AC=13;AF=0.271;AN=48;BaseQRankSum=6.104;DP=610;FS=8.390;HRun=0;HaplotypeScore=153.3448;InbreedingCoeff=0.3954;MQ=38.95;MQ0=15;MQRankSum=-5.829;QD=0.79;ReadPosRankSum=-1.828;VQSLOD=1.9281;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:0:0,0,0	0/1:22,0:21:23.29:61,0,23	0/0:39,0:7:3.05:0,3,124	0/0:46,0:10:18.06:0,18,255	0/0:12,0:12:36.12:0,36,544	0/0:11,1:11:0.38:0,0,1	1/1:24,0:21:2.88:27,3,0	0/0:7,0:7:17.69:0,18,160	1/1:20,0:20:9.78:118,10,0	0/0:23,0:23:63.09:0,63,896	0/0:7,0:7:21.06:0,21,299	0/0:32,0:32:84.27:0,84,1253	1/1:23,2:24:3.81:36,4,0	0/1:24,0:24:0.04:1,0,0	0/1:17,1:17:0:0,0,0	0/0:19,0:19:57.18:0,57,845	0/1:23,1:24:21.19:21,0,80	0/0:13,0:13:13.53:0,14,88	0/0:17,0:15:27.95:0,28,270	./.	0/1:31,0:29:0:0,0,0	./.	./.	./.	0/1:43,1:41:0.01:0,0,0	0/0:26,0:26:78.22:0,78,1100	0/1:13,1:14:55:55,0,135	0/0:15,0:15:45.15:0,45,686
chr10	103118313	.	C	CAT	161.69	PASS	AB=0.979;AC=9;AF=0.167;AN=54;BaseQRankSum=5.232;DP=639;FS=5.903;HRun=0;HaplotypeScore=162.2997;InbreedingCoeff=0.2819;MQ=38.31;MQ0=14;MQRankSum=-4.588;QD=0.82;ReadPosRankSum=-0.939;VQSLOD=2.3303;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:0:0,0,0	0/1:26,0:25:57.93:58,0,59	0/0:33,0:7:18.38:0,18,218	0/0:46,0:9:20.93:0,21,253	0/0:14,0:14:36.08:0,36,505	1/1:14,0:13:2.80:17,3,0	0/0:26,0:23:3.59:0,4,12	0/0:4,0:4:12:0,12,139	0/1:22,0:22:4.20:143,0,4	0/0:21,0:21:63.13:0,63,900	0/0:7,0:7:21.06:0,21,298	0/0:30,0:30:87.23:0,87,1245	0/1:26,0:24:19.61:40,0,20	0/0:34,0:32:2.32:0,2,10	0/1:17,3:19:0.10:0,0,0	0/0:19,0:19:57.16:0,57,825	0/0:23,1:24:8.82:0,9,223	0/0:15,0:15:21.76:0,22,215	0/0:16,0:14:29:0,29,293	0/1:23,0:22:0:0,0,1	0/0:32,0:30:4.53:0,5,15	./.	0/0:16,1:16:0:0,0,0	0/0:20,0:18:0:0,0,0	0/1:51,1:48:0:0,0,0	0/0:24,0:24:72.23:0,72,1074	0/1:15,0:15:13.72:14,0,184	0/0:15,0:15:45.13:0,45,665
chr10	103118316	.	ACG	A	101.94	PASS	AB=0.972;AC=17;AF=0.354;AN=48;BaseQRankSum=7.500;DP=637;FS=0.000;HRun=0;HaplotypeScore=156.0370;InbreedingCoeff=0.1808;MQ=38.39;MQ0=12;MQRankSum=-7.550;QD=0.28;ReadPosRankSum=-2.092;VQSLOD=2.3133;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:0:0,0,0	0/1:24,2:26:16.22:16,0,39	0/1:29,0:7:7.94:8,0,178	0/0:43,0:10:26.22:0,26,270	0/0:14,0:14:30.10:0,30,570	0/0:14,1:14:0.32:0,0,1	0/1:25,1:23:0.27:0,0,0	0/0:4,0:4:9.03:0,9,135	1/1:20,2:22:3.02:9,3,0	0/0:20,0:20:57.19:0,57,1060	0/0:6,0:6:18.06:0,18,343	0/0:30,0:30:84.27:0,84,1512	1/1:24,2:24:2.49:17,2,0	1/1:33,1:32:0.33:3,0,0	0/1:24,1:24:0:0,0,0	0/0:19,0:19:51.17:0,51,947	0/1:26,0:26:3.92:4,0,214	0/1:13,1:14:69.45:81,0,69	0/1:16,0:14:17.52:18,0,58	./.	0/1:29,0:27:0.04:0,0,0	./.	./.	./.	0/1:52,2:50:0.14:0,0,0	0/0:24,0:24:69.17:0,69,1281	0/1:14,1:15:63.14:63,0,72	0/0:14,0:14:42.14:0,42,782
chr10	103118318	.	GCA	G	72.57	PASS	AB=0.953;AC=11;AF=0.220;AN=50;BaseQRankSum=6.170;DP=624;FS=3.777;HRun=0;HaplotypeScore=150.6890;InbreedingCoeff=0.1915;MQ=38.31;MQ0=15;MQRankSum=-5.807;QD=0.27;ReadPosRankSum=-1.953;VQSLOD=2.5446;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,1:17:0.11:0,0,0	0/1:23,0:23:0.13:0,0,29	0/0:29,0:6:6.79:0,7,159	0/0:41,0:9:23.67:0,24,261	0/0:12,0:12:30.09:0,30,546	0/0:14,1:14:0.35:0,0,1	0/1:21,5:21:0.03:0,0,0	0/0:3,0:3:8.99:0,9,103	0/0:21,0:21:8.43:0,8,39	0/0:19,0:19:57.18:0,57,1036	0/0:6,0:6:18.06:0,18,347	0/0:30,0:30:87.24:0,87,1504	0/1:25,0:23:13.57:48,0,14	1/1:32,3:33:0.07:1,0,0	0/1:24,1:24:0:0,0,0	0/0:17,0:17:51.11:0,51,842	0/1:26,0:26:9.14:9,0,122	0/1:13,1:14:44.23:73,0,44	0/0:15,0:13:2.06:0,2,127	./.	0/0:27,0:25:0:0,0,0	./.	./.	0/0:18,0:17:0:0,0,0	0/1:56,2:54:0.01:0,0,0	0/0:24,0:24:69.23:0,69,1288	0/1:13,1:14:38.56:39,0,142	0/0:15,0:15:44.49:0,44,782
chr10	103118320	.	ACGCG	A	479.89	PASS	AB=0.916;AC=17;AF=0.327;AN=52;BaseQRankSum=7.776;DP=634;FS=2.657;HRun=0;HaplotypeScore=159.5364;InbreedingCoeff=0.2495;MQ=38.41;MQ0=14;MQRankSum=-7.460;QD=1.40;ReadPosRankSum=-2.080;VQSLOD=2.6445;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:0:0,0,0	0/1:22,0:23:33.27:33,0,53	0/0:29,0:8:16.14:0,16,212	0/0:39,0:10:17.83:0,18,294	0/0:14,0:14:36.05:0,36,796	0/0:14,1:15:0.40:0,0,1	0/0:26,1:22:5.70:0,6,25	0/0:3,0:3:6.01:0,6,70	0/1:19,2:21:10.63:11,0,26	0/0:20,0:20:57.15:0,57,1394	0/0:6,0:6:18.06:0,18,484	0/0:31,0:31:84.21:0,84,1953	1/1:20,2:24:11.05:73,11,0	1/1:33,0:33:0.65:3,1,0	0/1:24,1:24:0:0,0,0	0/0:17,0:17:45.13:0,45,1069	0/1:23,2:26:34.37:34,0,313	0/1:13,1:14:77.85:156,0,78	1/1:13,1:13:1.14:187,1,0	0/1:19,3:22:0:0,0,0	0/1:24,2:24:0:0,0,0	./.	./.	0/1:17,1:17:0:0,0,0	0/1:50,4:55:0.01:1,0,0	0/0:23,0:23:66.23:0,66,1688	0/1:12,1:14:43.94:106,0,44	0/0:16,0:16:48.12:0,48,1133
chr10	103118324	.	GCGCACA	G	299.32	PASS	AB=0.954;AC=12;AF=0.240;AN=50;BaseQRankSum=7.183;DP=628;FS=1.674;HRun=0;HaplotypeScore=163.7000;InbreedingCoeff=0.2961;MQ=37.10;MQ0=15;MQRankSum=-7.298;QD=1.29;ReadPosRankSum=-0.996;VQSLOD=2.5023;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:0:0,0,0	0/1:23,1:23:55.47:56,0,55	0/0:29,0:7:18.06:0,18,492	0/0:43,0:7:18.06:0,18,611	0/0:15,0:15:36.12:0,36,1175	0/0:16,1:16:0.32:0,0,1	0/0:24,1:19:5.52:0,6,31	0/0:2,0:2:6.02:0,6,65	0/1:16,5:21:4.96:107,0,5	0/0:19,0:19:54.19:0,54,1840	0/0:6,0:6:18.06:0,18,653	0/0:31,0:31:87.30:0,87,2544	1/1:22,3:24:5.32:32,5,0	1/1:37,0:35:1.51:4,2,0	1/1:21,2:22:2.04:6,2,0	0/0:18,0:18:48.16:0,48,1515	0/0:26,0:26:8.22:0,8,223	0/1:15,0:15:83.70:122,0,84	0/1:10,0:10:49.51:90,0,50	0/0:22,0:21:0:0,0,0	0/0:21,0:20:0:0,0,0	./.	./.	./.	0/1:59,3:56:0.02:0,0,0	0/0:24,0:24:72.19:0,72,2323	0/0:14,0:14:3.54:0,4,124	0/0:16,0:16:48.16:0,48,1584
chr10	103118332	.	ACG	A	222.05	PASS	AB=0.963;AC=15;AF=0.300;AN=50;BaseQRankSum=7.564;DP=669;FS=9.658;HRun=0;HaplotypeScore=155.6624;InbreedingCoeff=0.2865;MQ=35.15;MQ0=16;MQRankSum=-7.490;QD=0.68;ReadPosRankSum=-2.074;VQSLOD=1.8315;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,2:12:0:0,0,0	0/1:26,2:27:12.47:27,0,12	0/0:27,0:7:14.30:0,14,307	0/0:43,0:6:18.06:0,18,343	0/0:14,0:14:36.11:0,36,637	0/0:18,0:17:0.22:0,0,0	1/1:26,0:20:3.65:14,4,0	0/0:5,0:5:11.72:0,12,86	0/0:21,0:21:0.32:0,0,16	0/0:20,0:20:59.20:0,59,1038	0/0:8,0:8:23.91:0,24,379	0/0:30,0:30:84.04:0,84,1320	1/1:25,1:24:16.46:91,16,0	1/1:38,2:37:6.26:22,6,0	0/1:24,0:22:0:0,0,0	0/0:16,0:16:48.14:0,48,811	0/1:25,0:25:14.82:15,0,219	0/1:18,0:18:27.41:104,0,27	0/1:17,0:17:62.87:63,0,123	0/0:27,1:26:0.47:0,0,1	0/1:29,0:28:0:1,0,0	./.	./.	./.	0/1:61,4:59:0.13:0,0,0	0/0:26,0:26:75.07:0,75,1237	0/1:14,1:15:17.91:18,0,159	0/0:16,0:16:31.67:0,32,791
chr10	103118334	.	GCA	G	86.79	PASS	AB=0.978;AC=11;AF=0.220;AN=50;BaseQRankSum=7.286;DP=678;FS=7.501;HRun=0;HaplotypeScore=158.7919;InbreedingCoeff=0.3035;MQ=35.02;MQ0=16;MQRankSum=-6.893;QD=0.32;ReadPosRankSum=0.160;VQSLOD=2.2421;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/1:27,1:27:16.22:32,0,16	0/0:28,0:7:20.51:0,21,288	0/0:43,0:6:18.06:0,18,319	0/0:15,0:15:36.11:0,36,608	0/0:17,1:17:0.34:0,0,1	1/1:25,0:22:4.77:18,5,0	0/0:5,0:5:7.22:0,7,62	0/1:20,1:21:7.56:8,0,25	0/0:21,0:21:60.20:0,60,1028	0/0:8,0:8:24.08:0,24,406	0/0:29,0:29:78.27:0,78,1341	0/1:24,1:24:4.47:20,0,4	1/1:40,0:37:4.38:21,4,0	0/1:24,0:22:0:0,0,0	0/0:15,0:15:42.14:0,42,747	0/1:25,0:25:4.30:4,0,160	0/1:19,0:19:99:104,0,105	0/0:18,0:21:10.26:0,10,260	0/0:27,0:26:0.47:0,0,1	0/0:31,0:28:0:0,0,0	./.	./.	0/0:18,1:16:0:0,0,0	0/1:63,0:59:0.01:0,0,0	0/0:26,0:26:72.22:0,72,1211	0/0:14,0:14:9.15:0,9,87	0/0:16,0:16:44.49:0,44,676
chr10	103118335	.	CACACAT	C	517.79	PASS	AB=0.991;AC=15;AF=0.313;AN=48;BaseQRankSum=7.931;DP=677;FS=12.502;HRun=0;HaplotypeScore=175.5332;InbreedingCoeff=0.1743;MQ=35.09;MQ0=14;MQRankSum=-7.648;QD=1.51;ReadPosRankSum=0.407;VQSLOD=2.1828;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/1:27,1:27:25.56:100,0,26	0/0:27,0:7:17.65:0,18,461	0/0:41,0:6:18.06:0,18,489	0/0:15,0:15:33.10:0,33,973	0/0:18,0:17:0.47:0,0,1	0/1:29,0:24:6.73:7,0,9	0/0:5,0:5:5.99:0,6,53	0/1:21,0:21:28.43:103,0,28	0/0:21,0:21:57.19:0,57,1823	0/0:8,0:8:24.08:0,24,756	0/0:29,0:29:78:0,78,2482	0/1:26,0:24:6.05:37,0,6	1/1:40,0:37:3.52:10,4,0	1/1:24,0:22:1.91:6,2,0	0/0:15,0:15:42.14:0,42,1350	0/1:26,0:26:2.85:3,0,206	0/1:19,0:19:39.24:223,0,39	0/1:21,0:21:99:118,0,144	./.	0/1:31,0:28:0.16:0,0,0	./.	./.	0/0:18,0:16:0:0,0,0	0/1:62,3:59:0.01:0,0,0	0/0:26,0:26:72.25:0,72,2214	1/1:14,0:14:3.82:38,4,0	0/0:16,0:16:36.09:0,36,942
chr10	103118337	.	CACAT	C	575.83	PASS	AB=0.989;AC=16;AF=0.333;AN=48;BaseQRankSum=8.864;DP=675;FS=17.430;HRun=0;HaplotypeScore=166.2436;InbreedingCoeff=0.3493;MQ=35.02;MQ0=14;MQRankSum=-8.123;QD=1.66;ReadPosRankSum=0.299;VQSLOD=1.6013;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/1:28,0:27:9.92:75,0,10	0/0:27,0:7:16.27:0,16,335	0/0:39,0:6:18.06:0,18,385	0/0:15,0:15:33.10:0,33,787	0/0:18,0:17:0.45:0,0,1	0/1:31,0:26:7.81:17,0,8	0/0:4,0:4:5.91:0,6,54	1/1:21,0:21:17.63:107,18,0	0/0:21,0:21:57.19:0,57,1435	0/0:8,0:8:24.08:0,24,592	0/0:27,0:27:78:0,78,1956	1/1:26,0:24:7.48:55,7,0	1/1:39,1:37:6.73:25,7,0	0/1:22,2:22:0.13:0,0,0	0/0:15,0:15:42.14:0,42,1066	0/1:26,0:26:10.89:11,0,102	0/1:19,0:19:11.92:198,0,12	0/1:21,0:21:70.92:180,0,71	./.	0/1:28,0:25:0.09:0,0,0	./.	./.	0/0:17,1:16:0:0,0,0	0/1:67,1:62:0.01:0,0,0	0/0:27,0:27:75.25:0,75,1775	1/1:14,1:15:2.20:49,2,0	0/0:16,0:16:36.05:0,36,727
chr10	103118339	.	CAT	C	684.06	PASS	AB=0.844;AC=19;AF=0.396;AN=48;BaseQRankSum=9.537;DP=660;FS=22.971;HRun=0;HaplotypeScore=156.3223;InbreedingCoeff=0.3981;MQ=35.10;MQ0=14;MQRankSum=-8.950;QD=1.97;ReadPosRankSum=-0.143;VQSLOD=1.2712;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:16,12:27:12.47:149,12,0	0/0:24,0:7:15.50:0,15,253	0/0:37,0:6:18.06:0,18,295	0/0:14,0:14:33.10:0,33,594	0/0:13,5:17:0.32:0,0,1	1/1:20,9:24:5.20:35,5,0	0/1:4,1:5:6.37:34,0,6	1/1:10,11:21:0.75:78,1,0	0/0:21,0:21:60.19:0,60,1070	0/0:8,0:8:24.08:0,24,444	0/0:28,0:28:81:0,81,1461	1/1:18,7:23:9:98,9,0	1/1:23,17:37:6.19:26,6,0	0/1:10,14:22:0:0,0,0	0/0:16,0:16:45.11:0,45,788	0/1:22,4:26:49.96:64,0,50	0/1:17,2:19:11.26:218,0,11	0/1:20,1:21:69.19:74,0,69	./.	0/1:25,3:25:0:0,0,0	./.	./.	0/0:13,4:15:0:0,0,0	0/1:51,15:60:0.01:0,0,0	0/0:25,0:25:75.24:0,75,1327	1/1:14,1:15:0.58:51,1,0	0/0:14,0:14:36.05:0,36,554
chr10	103118340	.	A	ACG	54.54	PASS	AB=1.000;AC=11;AF=0.220;AN=50;BaseQRankSum=5.390;DP=648;FS=24.839;HRun=0;HaplotypeScore=155.2762;InbreedingCoeff=0.1301;MQ=35.07;MQ0=14;MQRankSum=-5.134;QD=0.22;ReadPosRankSum=1.581;VQSLOD=0.9094;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:0:0,0,0	0/1:28,0:27:20.21:20,0,46	0/0:25,0:7:16.30:0,16,247	0/0:36,0:6:18.06:0,18,259	0/0:14,0:14:33.10:0,33,509	0/1:17,0:16:0.12:0,0,0	0/1:29,0:24:7.14:7,0,14	0/0:4,0:4:8.95:0,9,80	0/1:21,0:21:31.85:47,0,32	0/0:20,0:20:60.20:0,60,940	0/0:8,0:8:24.08:0,24,390	0/0:28,0:28:81.26:0,81,1290	0/1:25,0:23:20.62:21,0,26	1/1:40,0:37:1.63:13,2,0	0/1:24,0:22:0:0,0,0	0/0:16,0:16:45.14:0,45,709	0/0:26,0:26:25.49:0,25,196	0/0:19,0:19:3.98:0,4,143	0/1:20,0:20:40.05:40,0,221	./.	0/1:27,0:24:0.07:0,0,0	./.	./.	0/0:17,0:15:0:0,0,0	0/0:62,3:59:0.47:0,0,2	0/0:25,0:25:75.23:0,75,1159	0/1:12,0:12:22.21:22,0,49	0/0:12,0:12:36.09:0,36,536
chr10	103118341	.	T	TGC	458.75	PASS	AB=0.963;AC=15;AF=0.300;AN=50;BaseQRankSum=7.166;DP=666;FS=43.436;HRun=0;HaplotypeScore=160.2085;InbreedingCoeff=0.0252;MQ=34.78;MQ0=14;MQRankSum=-6.941;QD=1.48;ReadPosRankSum=-1.080;VQSLOD=0.7251;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,2:12:0:0,0,0	0/1:25,3:27:26.25:120,0,26	0/0:25,0:7:17.81:0,18,230	0/0:35,0:5:15.05:0,15,216	0/0:13,0:13:33.09:0,33,490	0/1:16,0:16:0.12:0,0,0	0/1:28,1:25:1.40:1,0,14	0/1:10,0:11:14.73:15,0,35	0/1:18,2:22:24.90:178,0,25	0/0:20,0:20:60.20:0,60,946	0/0:8,0:8:24.06:0,24,366	0/0:28,0:28:81.21:0,81,1258	0/1:18,6:23:9.05:62,0,9	1/1:36,4:37:1.69:15,2,0	1/1:24,1:24:0.37:0,0,0	0/0:16,0:16:45.13:0,45,682	0/1:26,0:26:5.99:6,0,153	0/1:20,0:20:36.27:36,0,90	0/1:21,0:22:97.63:98,0,172	./.	0/1:29,0:27:0.07:0,0,0	./.	./.	0/0:15,1:15:0:0,0,0	0/0:63,5:62:0.47:0,0,2	0/0:25,0:25:75.24:0,75,1166	0/1:11,0:12:12.05:48,0,12	0/0:10,0:10:30.07:0,30,438
chr10	103118346	.	ACACG	A	427.70	PASS	AB=0.974;AC=12;AF=0.240;AN=50;BaseQRankSum=7.560;DP=693;FS=3.394;HRun=0;HaplotypeScore=177.8871;InbreedingCoeff=0.1547;MQ=34.63;MQ0=17;MQRankSum=-6.232;QD=1.30;ReadPosRankSum=-0.156;VQSLOD=2.5659;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,1:14:0:0,0,0	0/1:28,2:28:0.89:1,0,25	0/0:19,0:5:14.89:0,15,176	0/0:30,0:5:14.78:0,15,251	0/0:15,0:15:33.08:0,33,702	0/0:16,1:17:0.46:0,0,1	0/1:33,2:31:3.89:25,0,4	0/0:13,0:13:29.30:0,29,339	0/1:22,1:24:15.46:18,0,15	0/0:21,0:20:60.18:0,60,1388	0/0:8,0:8:21.07:0,21,464	0/0:29,0:29:78.72:0,79,1837	0/1:23,1:22:5.94:43,0,6	1/1:37,0:34:5.37:26,5,0	0/0:26,0:24:2.74:0,3,18	0/0:16,0:16:39.13:0,39,1007	0/1:27,0:27:0.18:0,0,88	0/1:20,0:20:47.40:236,0,47	0/1:32,0:31:99:173,0,232	0/0:26,0:23:0.47:0,0,1	0/0:33,0:29:1.08:0,1,3	./.	./.	./.	0/1:69,0:67:0.14:0,0,0	0/0:25,0:24:69.17:0,69,1530	0/1:14,0:14:9.67:27,0,10	0/0:8,0:8:24.06:0,24,515
chr10	103118348	.	ACG	A	323.18	PASS	AB=0.992;AC=11;AF=0.220;AN=50;BaseQRankSum=7.609;DP=681;FS=6.504;HRun=0;HaplotypeScore=165.8052;InbreedingCoeff=0.2581;MQ=34.73;MQ0=16;MQRankSum=-6.748;QD=1.19;ReadPosRankSum=-1.818;VQSLOD=1.6865;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:14:0:0,0,0	0/1:30,0:28:9.23:29,0,9	0/0:18,0:5:13.07:0,13,120	0/0:29,0:5:15.05:0,15,248	0/0:15,0:15:33.08:0,33,559	0/0:17,0:17:0.46:0,0,1	0/1:33,0:31:4.98:12,0,5	0/0:12,1:13:17.56:0,18,310	0/0:23,0:23:5.89:0,6,46	0/0:22,0:21:62.96:0,63,1057	0/0:7,0:7:21.07:0,21,390	0/0:29,0:29:57.23:0,57,1335	0/1:22,0:21:5.62:88,0,6	1/1:36,1:34:5.97:29,6,0	0/0:26,0:24:2.70:0,3,18	0/0:15,0:15:39.12:0,39,717	0/0:24,3:27:1.83:0,2,232	0/1:18,0:19:49.09:156,0,49	0/1:30,1:30:78.45:78,0,296	0/0:22,1:21:0.47:0,0,1	0/0:33,1:30:0.66:0,1,2	./.	./.	./.	0/1:67,2:64:0.29:0,0,0	0/0:26,0:25:72.13:0,72,1195	1/1:12,1:13:2.23:54,2,0	0/0:8,0:8:23.96:0,24,378
chr10	103118350	.	GCA	G	168.30	PASS	AB=0.986;AC=13;AF=0.250;AN=52;BaseQRankSum=6.758;DP=690;FS=16.695;HRun=0;HaplotypeScore=170.5908;InbreedingCoeff=0.0981;MQ=34.71;MQ0=17;MQRankSum=-5.053;QD=0.48;ReadPosRankSum=0.312;VQSLOD=1.9614;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:2.80:0,3,13	0/1:29,0:28:13.38:13,0,15	0/0:15,0:5:2.83:0,3,45	0/0:28,0:5:14.99:0,15,194	0/0:14,0:14:30.09:0,30,480	0/0:17,0:17:0.47:0,0,1	0/1:33,0:31:1.33:1,0,6	0/1:15,0:15:4.46:4,0,189	0/1:23,0:23:1.45:1,0,59	0/0:22,0:21:60.20:0,60,977	0/0:8,0:8:24.07:0,24,369	0/0:28,0:28:72.72:0,73,1209	0/1:23,0:21:2.33:30,0,2	1/1:38,0:35:3.10:7,3,0	0/0:26,0:25:2.88:0,3,31	0/0:14,0:14:36.12:0,36,623	0/0:28,0:28:27.40:0,27,211	0/1:19,0:20:97.13:97,0,130	0/1:33,1:32:71.66:72,0,371	0/0:26,0:24:3:0,3,25	0/1:33,0:30:0.12:0,0,0	./.	./.	0/1:17,0:15:0:0,0,0	0/1:66,3:64:0:0,0,0	0/0:27,0:26:66.07:0,66,1039	0/1:13,0:13:13.06:56,0,13	0/0:9,0:9:21.04:0,21,325
chr10	103118358	.	ACG	A	555.61	PASS	AB=0.900;AC=16;AF=0.296;AN=54;BaseQRankSum=8.334;DP=717;FS=56.287;HRun=0;HaplotypeScore=183.6278;InbreedingCoeff=0.2283;MQ=34.44;MQ0=14;MQRankSum=-7.434;QD=1.36;ReadPosRankSum=-3.832;VQSLOD=-0.5616;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,4:14:2.74:0,3,14	1/1:23,8:29:11.52:94,12,0	0/0:11,0:2:3.01:0,3,36	0/0:21,1:5:9.92:0,10,152	0/0:12,0:12:27.09:0,27,500	0/0:15,4:18:0.47:0,0,1	0/1:34,7:37:18.39:21,0,18	0/1:19,0:19:67.10:112,0,67	0/1:17,6:23:9.16:74,0,9	0/0:24,0:22:39.23:0,39,1043	0/0:10,0:10:27.03:0,27,397	0/0:30,0:30:86.37:0,86,1420	1/1:19,3:20:7.18:97,7,0	1/1:25,14:36:6.73:26,7,0	0/0:19,7:25:2.75:0,3,27	0/0:13,0:13:36.12:0,36,693	0/0:28,2:29:21.43:0,21,319	0/1:18,2:20:77.08:118,0,77	0/1:43,1:40:87.21:87,0,459	0/0:24,1:26:3.89:0,4,32	0/1:36,2:34:0:0,0,0	./.	0/1:19,7:24:0.12:0,0,0	0/1:20,2:20:0:0,0,0	0/1:52,16:63:0.29:0,0,0	0/0:24,0:23:66.20:0,66,1133	0/1:15,0:15:11.24:67,0,11	0/0:7,0:7:21.07:0,21,357
chr10	103118359	.	C	CAT	172.62	PASS	AB=0.984;AC=12;AF=0.222;AN=54;BaseQRankSum=6.555;DP=714;FS=3.933;HRun=0;HaplotypeScore=188.0665;InbreedingCoeff=0.1308;MQ=34.48;MQ0=15;MQRankSum=-5.213;QD=0.54;ReadPosRankSum=-2.883;VQSLOD=2.2419;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:2.74:0,3,12	0/0:29,1:28:13.47:0,13,52	0/0:12,0:2:3.01:0,3,39	0/0:22,0:4:12.04:0,12,175	0/0:12,0:12:27.09:0,27,438	0/1:20,0:19:0.12:0,0,0	0/1:39,1:37:6.90:48,0,7	0/0:20,0:20:52.93:0,53,392	0/1:23,0:23:2.77:3,0,27	0/0:23,0:21:63.16:0,63,939	0/0:9,0:9:24.06:0,24,359	0/0:31,0:31:86.95:0,87,1243	0/1:22,0:20:14.85:57,0,15	1/1:36,1:34:3.88:14,4,0	0/0:22,4:25:2.87:0,3,30	0/0:13,0:13:36.12:0,36,584	0/1:30,0:29:66.06:66,0,240	0/1:21,0:20:76.66:77,0,87	0/0:44,0:40:6.96:0,7,697	0/0:28,0:26:4.05:0,4,23	0/0:37,0:33:1.03:0,1,3	./.	0/1:24,1:23:0:0,0,0	0/1:24,0:22:0:0,0,0	0/1:64,1:61:0:0,0,0	0/0:24,0:23:65.91:0,66,968	0/1:13,1:14:26.22:26,0,43	0/0:7,0:7:21.03:0,21,305
chr10	103118360	.	GCA	G	181.49	PASS	AB=0.963;AC=12;AF=0.231;AN=52;BaseQRankSum=6.664;DP=721;FS=25.878;HRun=0;HaplotypeScore=186.7262;InbreedingCoeff=0.3158;MQ=34.49;MQ0=18;MQRankSum=-6.065;QD=0.70;ReadPosRankSum=-3.514;VQSLOD=0.5526;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:15:2.84:0,3,14	1/1:29,1:28:10.11:128,10,0	./.	0/0:24,0:4:11.99:0,12,150	0/0:12,0:12:27.08:0,27,488	0/0:19,1:19:3.40:0,3,17	0/0:40,0:37:3.94:0,4,50	0/1:20,0:20:11.94:12,0,160	0/1:18,5:23:4.29:110,0,4	0/0:23,0:21:58.62:0,59,1061	0/0:9,0:9:24.07:0,24,388	0/0:30,0:30:87.23:0,87,1526	1/1:19,3:20:2.07:30,2,0	1/1:36,0:34:2.31:6,2,0	0/0:26,2:27:8.83:0,9,67	0/0:13,0:13:36.12:0,36,695	0/0:31,0:29:48.82:0,49,382	0/1:21,0:20:15.55:16,0,180	0/0:44,0:40:17.28:0,17,638	0/0:27,0:27:4.26:0,4,48	0/0:39,0:34:1.13:0,1,3	./.	0/1:25,0:23:0.12:0,0,0	0/0:23,1:22:2.90:0,3,17	0/1:64,3:61:0:0,0,0	0/0:24,0:23:63.21:0,63,1144	0/1:13,0:14:1.30:1,0,63	0/0:7,0:7:21.04:0,21,361
chr10	103118362	.	ACG	A	286.28	PASS	AB=0.977;AC=18;AF=0.333;AN=54;BaseQRankSum=7.723;DP=722;FS=15.010;HRun=0;HaplotypeScore=186.9871;InbreedingCoeff=0.2399;MQ=34.73;MQ0=17;MQRankSum=-5.405;QD=0.73;ReadPosRankSum=-4.661;VQSLOD=0.2506;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:16:2.74:0,3,14	1/1:30,0:28:0.88:93,1,0	1/1:10,0:1:1.55:4,2,0	0/0:23,0:5:7.85:0,8,96	0/0:12,0:12:24.08:0,24,446	0/0:20,0:19:3.22:0,3,13	0/1:41,0:37:4.98:30,0,5	0/1:18,2:20:73.17:73,0,232	1/1:23,0:23:8.14:55,8,0	0/0:23,0:21:56.82:0,57,987	0/0:9,0:9:23.71:0,24,347	0/0:30,0:30:84.20:0,84,1535	1/1:22,0:20:0.66:92,1,0	1/1:35,1:34:2.23:7,2,0	0/0:27,0:26:0.05:0,0,1	0/0:13,0:13:36.12:0,36,675	0/0:31,0:29:11.95:0,12,197	0/1:19,0:18:21.18:21,0,109	0/1:44,0:40:8.40:8,0,373	0/0:29,2:29:3.81:0,4,23	0/1:39,1:35:0:0,0,0	./.	0/1:24,0:22:0.12:0,0,0	0/0:24,0:22:2.72:0,3,12	0/1:61,5:60:0.29:0,0,0	0/0:24,0:23:65.23:0,65,1031	0/1:15,0:15:35.32:35,0,44	0/0:7,0:7:17.69:0,18,314
chr10	103118374	.	A	ACACACG	661.48	PASS	AB=0.942;AC=10;AF=0.179;AN=56;BaseQRankSum=2.413;DP=767;FS=6.794;HRun=0;HaplotypeScore=212.5029;InbreedingCoeff=0.0719;MQ=36.84;MQ0=19;MQRankSum=-4.067;QD=2.85;ReadPosRankSum=-2.301;VQSLOD=1.7277;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:19:5.79:0,6,44	0/1:30,0:27:15.44:15,0,34	0/0:11,0:3:2.96:0,3,19	0/0:22,0:4:11.99:0,12,137	0/0:11,0:11:21.07:0,21,502	0/0:20,0:19:8.09:0,8,63	0/0:50,0:41:0.17:0,0,127	0/1:19,1:22:99:315,0,393	0/0:22,0:22:7.18:0,7,52	0/0:28,0:26:63.25:0,63,1183	0/0:8,0:8:24.08:0,24,512	0/0:29,0:28:81.28:0,81,1911	0/0:25,0:23:1.78:0,2,129	0/0:39,0:36:8.97:0,9,67	0/1:29,0:28:1.17:1,0,23	0/0:17,0:17:42.09:0,42,771	0/0:29,0:29:18.21:0,18,205	0/1:25,0:24:18.11:18,0,271	0/1:37,1:32:99:281,0,176	1/1:29,0:28:8.35:57,8,0	1/1:42,1:39:4.35:56,4,0	0/0:44,0:41:2.99:0,3,24	0/0:26,0:24:8.03:0,8,56	0/0:29,0:27:2.73:0,3,16	0/0:68,0:62:8.86:0,9,93	0/0:23,0:21:60.02:0,60,1224	0/1:11,3:14:40.28:52,0,40	0/0:9,0:9:27.05:0,27,488
chr10	103118378	.	A	ACG	584.73	PASS	AB=0.990;AC=20;AF=0.357;AN=56;BaseQRankSum=4.991;DP=779;FS=19.849;HRun=0;HaplotypeScore=187.1718;InbreedingCoeff=0.0749;MQ=38.76;MQ0=17;MQRankSum=-1.023;QD=1.22;ReadPosRankSum=-1.337;VQSLOD=1.4258;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:23:4.82:0,5,23	0/1:30,0:27:15.81:30,0,16	0/0:11,0:2:3:0,3,27	0/0:24,0:6:13.86:0,14,177	0/0:10,0:10:21.06:0,21,300	1/1:22,0:21:8.10:63,8,0	0/1:50,0:41:1.47:110,0,1	0/1:24,0:22:28.97:29,0,186	0/1:21,1:22:18.44:38,0,18	0/0:27,0:25:72.16:0,72,934	0/0:8,0:8:22.21:0,22,295	0/0:31,0:30:87.24:0,87,1238	0/1:23,0:21:18.04:18,0,52	0/0:41,0:38:8.41:0,8,27	0/0:29,0:28:2.58:0,3,46	0/0:17,0:17:41.99:0,42,581	0/1:34,2:34:99:222,0,130	0/1:27,0:26:99:109,0,113	0/1:33,0:27:18.45:18,0,195	0/1:31,0:29:8.01:8,0,32	0/0:42,0:39:8.12:0,8,53	1/1:42,1:41:2.80:13,3,0	1/1:26,0:24:0.25:14,0,0	1/1:29,0:28:2.82:38,3,0	1/1:66,2:62:4.92:30,5,0	0/0:23,0:22:65.97:0,66,853	0/1:15,0:15:1.92:2,0,42	0/0:10,0:10:29.97:0,30,390
chr10	103118382	.	A	ACG	149.54	PASS	AB=0.967;AC=6;AF=0.107;AN=56;BaseQRankSum=5.280;DP=796;FS=23.946;HRun=0;HaplotypeScore=187.8188;InbreedingCoeff=0.0232;MQ=39.19;MQ0=18;MQRankSum=-5.442;QD=1.22;ReadPosRankSum=-0.998;VQSLOD=1.2272;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:21:5.67:0,6,65	0/1:29,0:26:43.87:48,0,44	0/0:16,0:3:3.01:0,3,32	0/0:31,0:8:18.50:0,19,203	0/0:10,0:10:21.05:0,21,299	0/0:22,0:21:8.05:0,8,70	0/0:50,0:41:10.65:0,11,89	0/1:27,2:27:99:158,0,199	1/1:22,0:22:0.89:15,1,0	0/0:25,0:23:66.04:0,66,872	0/0:10,0:10:26.96:0,27,337	0/0:32,0:31:90.23:0,90,1266	0/0:21,0:19:4.75:0,5,124	0/0:41,0:38:10.34:0,10,103	0/0:29,0:28:14.73:0,15,105	0/0:16,0:16:42.12:0,42,596	0/0:37,0:35:23.52:0,24,252	0/1:29,0:28:2.44:2,0,217	0/0:30,0:25:0.56:0,1,276	0/0:32,0:30:14.39:0,14,127	0/0:40,5:42:13.84:0,14,101	0/0:44,0:41:3.01:0,3,33	0/0:28,0:26:8.92:0,9,108	0/0:29,0:28:2.10:0,2,7	0/0:64,0:60:9.02:0,9,105	0/0:25,0:24:66.04:0,66,865	0/1:13,1:14:33.34:33,0,108	0/0:11,0:11:33.02:0,33,423
chr10	103118392	.	GCA	G	2445.16	PASS	AB=0.836;AC=35;AF=0.625;AN=56;BaseQRankSum=4.822;DP=755;FS=14.801;HRun=0;HaplotypeScore=150.3319;InbreedingCoeff=0.4559;MQ=42.48;MQ0=18;MQRankSum=-0.753;QD=4.30;ReadPosRankSum=-0.711;VQSLOD=2.1137;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,20:22:3.01:38,3,0	1/1:20,6:23:2.38:37,2,0	0/0:24,0:4:9.82:0,10,68	0/0:42,0:14:28.83:0,29,382	0/1:15,0:15:7.04:7,0,382	1/1:8,12:19:8.86:113,9,0	1/1:17,29:39:14.25:188,14,0	1/1:8,11:17:22.11:345,22,0	1/1:12,6:18:5.92:70,6,0	0/0:26,0:25:55.78:0,56,979	0/0:11,0:11:28.88:0,29,376	0/0:30,1:30:31.56:0,32,1028	1/1:11,7:16:4.47:73,4,0	1/1:19,15:32:4.69:74,5,0	0/1:28,0:27:20.34:85,0,20	0/0:17,0:17:39.10:0,39,593	1/1:12,24:34:8.48:212,8,0	0/1:9,16:24:41.33:193,0,41	1/1:11,10:18:8.47:314,8,0	1/1:27,5:30:26.87:309,27,0	1/1:37,3:38:20.85:253,21,0	1/1:30,16:43:3.01:38,3,0	1/1:16,9:23:8.86:113,9,0	1/1:8,20:27:2.90:38,3,0	0/1:35,18:51:10.85:67,0,11	0/0:24,0:23:25.75:0,26,894	0/1:11,2:14:12.72:70,0,13	0/0:11,0:11:27.90:0,28,372
chr10	103119374	.	CA	C	1225.77	PASS	AB=0.818;AC=11;AF=0.196;AN=56;BaseQRankSum=0.197;DP=405;FS=3.240;HRun=11;HaplotypeScore=72.6240;InbreedingCoeff=0.7082;MQ=62.32;MQ0=10;MQRankSum=3.684;QD=14.25;ReadPosRankSum=-2.068;VQSLOD=3.5855;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:13:8.91:0,9,51	0/0:5,0:5:11.80:0,12,74	0/1:7,1:7:13.04:13,0,56	0/0:18,0:13:20.54:0,21,178	0/0:23,0:25:56.80:0,57,564	0/0:13,0:13:33.12:0,33,198	0/0:4,0:4:8.56:0,9,48	1/1:4,14:17:41.89:339,42,0	0/0:5,0:11:2.27:0,2,13	0/0:30,2:33:53.30:0,53,727	0/0:19,1:20:23.31:0,23,437	0/0:19,0:19:48.05:0,48,488	0/0:9,0:7:10.14:0,10,61	0/0:9,0:7:3.44:0,3,22	0/0:5,0:11:11.62:0,12,69	0/0:13,0:12:33.03:0,33,331	0/0:19,0:19:22.58:0,23,135	0/0:12,0:12:23.12:0,23,122	1/1:3,15:17:15.95:332,16,0	1/1:0,15:16:43.98:350,44,0	1/1:4,8:11:20.98:172,21,0	0/0:7,0:7:9.22:0,9,48	0/0:10,0:8:2.68:0,3,11	0/0:5,0:5:2.94:0,3,18	0/0:16,0:13:25.79:0,26,131	0/0:17,1:18:29.32:0,29,476	1/1:2,11:12:23.93:191,24,0	0/0:24,1:24:41.46:0,41,627
chr10	103119381	.	A	AAAAAAAAAG	4661.48	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=11.973;DP=410;FS=2.128;HRun=0;HaplotypeScore=138.8884;InbreedingCoeff=0.8751;MQ=65.67;MQ0=6;MQRankSum=-10.348;QD=32.15;ReadPosRankSum=-0.432;VQSLOD=4.7410;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:13:17.09:243,17,0	1/1:5,0:5:12.01:170,12,0	0/0:12,0:10:18.73:0,19,273	0/0:19,0:14:36.66:0,37,497	0/0:29,0:29:72.07:0,72,1471	1/1:13,0:13:39.09:583,39,0	1/1:6,0:6:12.01:142,12,0	0/0:17,0:17:48.51:0,49,763	1/1:7,0:7:6.02:132,6,0	0/0:32,0:32:87.22:0,87,1898	0/0:19,0:19:54.03:0,54,1222	0/0:17,0:17:25.40:0,25,1084	1/1:10,0:8:14.29:160,14,0	1/1:8,0:6:17.41:169,17,0	0/1:11,0:11:7.82:341,0,8	0/0:13,0:12:36.05:0,36,825	1/1:11,9:20:23.17:942,23,0	1/1:13,0:13:36.05:696,36,0	0/0:23,0:23:65.94:0,66,990	0/0:17,0:17:50.62:0,51,800	0/0:11,0:11:21.07:0,21,430	1/1:7,0:8:21.03:289,21,0	1/1:2,0:6:3.01:40,3,0	1/1:3,0:3:9.03:260,9,0	1/1:16,0:14:21.21:493,21,0	0/0:20,0:20:57.09:0,57,1223	0/0:12,0:11:24.05:0,24,450	0/0:24,0:23:61.37:0,61,1559
chr10	103119670	.	C	CTG	28940.93	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-18.639;DP=807;FS=5.196;HRun=0;HaplotypeScore=87.5767;InbreedingCoeff=0.9687;MQ=87.93;MQ0=0;MQRankSum=-5.281;QD=51.68;ReadPosRankSum=3.894;VQSLOD=5.7490;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,45:46:99:2364,116,0	1/1:1,10:11:24.08:463,24,0	0/0:27,0:27:65.76:0,66,1034	0/0:31,0:31:75.28:0,75,1254	0/0:34,0:34:96.31:0,96,1443	1/1:0,24:24:69.24:1332,69,0	1/1:0,31:31:90.31:1738,90,0	1/1:1,40:41:99:2250,120,0	1/1:1,36:37:96.33:1854,96,0	0/0:34,0:34:96.33:0,96,1469	0/0:22,0:22:60.20:0,60,917	0/0:22,0:22:63.20:0,63,944	1/1:2,18:20:48.16:927,48,0	1/1:0,25:25:72.25:1390,72,0	1/1:1,33:34:87.30:1681,87,0	0/0:21,1:22:2.25:0,2,815	1/1:1,42:43:99:2143,111,0	1/1:0,25:25:72.25:1390,72,0	1/1:2,18:21:57.17:1063,57,0	1/1:1,22:22:57.20:1100,57,0	1/1:1,61:62:99:3360,175,0	1/1:1,19:21:48.16:926,48,0	1/1:2,14:16:32.99:637,33,0	1/1:1,33:34:96.33:1854,96,0	1/1:0,23:23:63.22:1215,63,0	0/0:33,0:33:99:0,99,1493	1/1:1,22:23:66.23:1253,66,0	0/0:22,0:22:66.13:0,66,897
chr10	103122442	.	GCA	G	777.32	PASS	AB=0.888;AC=29;AF=0.630;AN=46;BaseQRankSum=3.608;DP=543;FS=8.586;HRun=0;HaplotypeScore=116.3785;InbreedingCoeff=-0.0372;MQ=53.29;MQ0=11;MQRankSum=-1.040;QD=2.13;ReadPosRankSum=0.432;VQSLOD=1.8292;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,2:5:3.01:32,3,0	./.	0/0:28,0:3:0.47:0,0,1	0/0:14,0:14:24.54:0,25,341	0/1:6,5:11:27.18:150,0,27	./.	0/0:25,0:24:5.84:0,6,42	./.	0/1:21,0:21:12.71:13,0,512	0/1:20,0:20:45.98:46,0,209	0/1:26,0:26:51.41:51,0,426	1/1:14,5:19:18.92:193,19,0	0/1:5,14:19:25.64:26,0,39	1/1:7,0:9:5.64:27,6,0	0/1:17,0:17:26.75:27,0,313	0/1:24,0:24:9.27:9,0,221	0/1:18,9:28:43.29:93,0,43	1/1:22,0:22:0.47:1,0,0	1/1:12,0:12:2.65:11,3,0	1/1:46,0:46:2.49:16,2,0	1/1:14,5:20:1.82:5,2,0	./.	1/1:18,1:18:15.50:163,15,0	1/1:6,9:15:2.98:23,3,0	0/1:20,0:20:5.54:6,0,368	1/1:10,0:10:5.52:25,6,0	0/0:11,0:11:15.51:0,16,203
chr10	103122469	.	TACACACACACAC	T	2546.70	PASS	AC=26;AF=0.500;AN=52;BaseQRankSum=-0.823;DP=583;FS=11.485;HRun=0;HaplotypeScore=212.3041;InbreedingCoeff=0.8220;MQ=47.32;MQ0=17;MQRankSum=-2.161;QD=9.68;ReadPosRankSum=-3.977;VQSLOD=0.3378;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:35:17.38:203,17,0	1/1:4,2:6:14.64:242,15,0	./.	./.	0/0:23,0:20:26.78:0,27,881	1/1:10,5:15:13.58:278,14,0	1/1:20,0:20:24.01:340,24,0	0/0:28,0:26:7.33:0,7,51	1/1:22,2:24:8.24:70,8,0	0/0:24,0:24:50.58:0,51,1557	0/0:13,0:22:21.07:0,21,950	0/0:24,0:25:33.51:0,34,1011	1/1:13,5:18:17.08:324,17,0	1/1:19,3:22:10.54:168,11,0	1/1:13,0:15:6.49:152,6,0	0/0:10,0:11:12.04:0,12,606	0/0:28,0:28:40.78:0,41,1639	1/1:25,4:28:26.17:601,26,0	0/0:19,0:17:25.16:0,25,185	0/0:15,0:15:5.52:0,6,69	0/0:46,0:46:16.18:0,16,165	1/1:19,3:23:3.01:89,3,0	1/1:14,5:18:3.01:44,3,0	1/1:18,0:18:2.05:9,2,0	1/1:13,3:15:15.92:226,16,0	0/0:23,0:22:43.27:0,43,1344	0/0:13,0:13:4.46:0,4,43	0/0:8,0:17:17.66:0,18,675
chr10	103123217	.	T	TACAC	5218.49	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-2.982;DP=968;FS=3.939;HRun=0;HaplotypeScore=152.4986;InbreedingCoeff=0.9362;MQ=61.78;MQ0=25;MQRankSum=0.141;QD=18.31;ReadPosRankSum=-0.432;VQSLOD=4.4615;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,122,1874	0/0:11,0:10:21.07:0,21,349	0/1:66,0:28:0.95:1,0,635	0/0:72,0:34:41.56:0,42,556	0/0:28,0:28:57.09:0,57,859	0/0:32,0:32:72.09:0,72,1090	0/0:34,0:35:63.16:0,63,958	1/1:11,15:29:12.19:798,12,0	0/0:42,0:44:99:0,99,1541	0/0:30,0:30:54.15:0,54,825	0/0:25,0:26:48.14:0,48,745	0/0:33,0:33:66.18:0,66,1021	0/0:19,0:20:54.16:0,54,840	0/0:35,0:35:87.25:0,87,1364	0/0:34,0:34:87.02:0,87,1303	0/0:28,0:28:75.26:0,75,1240	1/1:9,0:43:54.30:249,54,0	0/0:33,0:33:42.53:0,43,1022	1/1:15,10:23:32.74:470,33,0	1/1:7,19:29:41.50:973,41,0	1/1:17,34:54:71.45:1546,71,0	0/0:24,0:24:57.18:0,57,915	0/0:29,0:29:60.19:0,60,945	0/0:39,0:39:93.26:0,93,1439	0/0:24,0:24:60.20:0,60,959	0/0:32,0:32:41.77:0,42,1087	1/1:10,23:33:50.92:1182,51,0	0/0:16,0:16:45.07:0,45,632
chr10	103123792	.	CTACACATGTGCACACAT	C	3542.75	PASS	AB=1.000;AC=26;AF=0.481;AN=54;BaseQRankSum=7.915;DP=912;FS=6.355;HRun=0;HaplotypeScore=387.6501;InbreedingCoeff=0.6387;MQ=64.79;MQ0=3;MQRankSum=-7.968;QD=9.11;ReadPosRankSum=0.804;VQSLOD=0.6343;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:2.69:0,3,7	1/1:13,0:13:6.02:173,6,0	0/0:51,0:38:0:0,0,0	0/0:79,0:51:3.01:0,3,79	0/0:20,0:20:36.11:0,36,1763	1/1:36,0:36:6.32:149,6,0	0/0:23,0:23:4.37:0,4,14	1/1:29,0:29:9.01:151,9,0	1/1:34,0:34:18.06:519,18,0	0/0:48,0:48:69.24:0,69,3575	0/0:23,0:23:42.14:0,42,2201	0/0:39,0:39:69.24:0,69,3514	1/1:25,0:25:24.08:655,24,0	1/1:38,0:38:21.07:601,21,0	0/1:32,0:32:66:66,0,116	0/0:40,0:40:75.24:0,75,4131	1/1:11,10:20:3.48:139,3,0	1/1:21,0:20:14.16:384,14,0	1/1:19,0:18:5.95:69,6,0	0/1:25,0:25:0:0,0,0	0/0:48,0:46:0.80:0,1,3	./.	0/0:26,0:26:1.25:0,1,3	1/1:32,0:32:0.47:1,0,0	1/1:32,0:32:6.02:173,6,0	0/0:35,0:35:60.21:0,60,3150	1/1:32,0:32:27.08:462,27,0	0/0:21,0:21:42.14:0,42,2500
chr10	103123829	.	CACATGTGCACACATT	C	8525.19	PASS	AB=0.716;AC=30;AF=0.536;AN=56;BaseQRankSum=9.360;DP=823;FS=0.389;HRun=0;HaplotypeScore=262.1759;InbreedingCoeff=0.3529;MQ=53.47;MQ0=12;MQRankSum=-9.010;QD=17.58;ReadPosRankSum=0.065;VQSLOD=3.4357;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,30:34:1.30:95,1,0	1/1:0,12:12:18.06:454,18,0	0/0:44,0:10:7.20:0,7,101	0/0:58,0:17:25.06:0,25,317	0/0:29,0:29:78.24:0,78,2790	0/1:9,26:35:7.87:525,0,8	1/1:20,0:20:10.38:621,10,0	1/1:16,0:16:24.02:310,24,0	1/1:3,29:32:0.78:990,1,0	0/0:47,0:47:99:0,126,4981	0/0:23,0:23:69.23:0,69,3125	0/0:41,0:41:99:0,111,4581	1/1:2,21:23:35.94:1185,36,0	1/1:2,33:35:6.84:1178,7,0	0/1:31,0:31:26.14:143,0,26	0/0:34,0:34:96.31:0,96,4819	0/1:21,0:20:92.47:92,0,170	1/1:15,0:15:15.29:687,15,0	1/1:15,0:14:32.93:367,33,0	1/1:17,0:17:11.11:100,11,0	0/1:44,0:42:6.81:87,0,7	0/1:1,27:28:15.97:258,0,16	0/1:3,16:19:28.77:84,0,29	0/1:7,23:30:26.75:71,0,27	0/1:4,24:28:14.27:435,0,14	0/0:37,0:37:99:0,102,4272	1/1:30,0:30:44.21:844,44,0	0/0:25,0:25:73.48:0,73,3193
chr10	103123831	.	CATGTGCACACATT	C	7115.07	PASS	AB=0.955;AC=27;AF=0.482;AN=56;BaseQRankSum=12.087;DP=819;FS=3.962;HRun=0;HaplotypeScore=246.4141;InbreedingCoeff=0.2682;MQ=53.33;MQ0=12;MQRankSum=-8.775;QD=14.79;ReadPosRankSum=0.542;VQSLOD=3.6456;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:0.12:21,0,0	1/1:12,0:12:17.51:274,18,0	0/0:44,0:10:16.42:0,16,182	0/0:59,0:18:34.46:0,34,511	0/0:30,0:30:81.26:0,81,3057	0/1:34,1:35:29.84:303,0,30	0/1:20,0:20:5.68:177,0,6	1/1:18,0:18:9.18:471,9,0	0/1:32,0:32:27.51:608,0,28	0/0:46,0:46:99:0,131,5155	0/0:23,0:23:69.24:0,69,3208	0/0:41,0:41:99:0,111,4708	1/1:22,1:23:25.52:841,26,0	0/1:35,0:35:8.72:720,0,9	1/1:29,0:29:10.21:286,10,0	0/0:34,0:34:96.32:0,96,4701	0/1:21,0:20:80.87:81,0,289	1/1:15,0:15:5.74:475,6,0	1/1:5,9:13:24.16:709,24,0	1/1:0,17:17:10.75:286,11,0	0/1:6,38:42:6.92:141,0,7	0/1:28,0:28:31.86:79,0,32	0/1:18,0:18:17.62:18,0,49	0/1:29,0:29:4.17:4,0,50	0/1:27,0:27:35.23:226,0,35	0/0:36,0:36:99:0,108,4489	1/1:2,28:30:42.89:1395,43,0	0/0:25,0:25:74.74:0,75,3303
chr10	103123832	.	ATGTG	A	2124.76	PASS	AB=0.967;AC=13;AF=0.232;AN=56;BaseQRankSum=9.279;DP=808;FS=3.187;HRun=0;HaplotypeScore=182.0023;InbreedingCoeff=-0.1172;MQ=53.36;MQ0=12;MQRankSum=-8.043;QD=7.43;ReadPosRankSum=2.828;VQSLOD=2.8262;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,2:34:8.79:0,9,118	0/1:12,0:12:63.48:63,0,97	0/0:43,0:10:20.04:0,20,514	0/0:60,0:18:38.10:0,38,866	0/0:29,0:29:81.26:0,81,2283	0/1:30,3:33:37.54:38,0,389	0/0:15,4:19:36.77:0,37,922	0/1:20,0:20:95.09:95,0,1059	0/1:32,1:33:99:194,0,356	0/0:45,0:45:99:0,132,3755	0/0:23,0:23:69.24:0,69,1960	0/0:41,0:41:99:0,114,3224	0/1:23,0:23:99:221,0,215	0/1:34,0:34:99:273,0,359	1/1:1,26:27:38.06:809,38,0	0/0:34,0:34:96.32:0,96,2668	0/1:20,0:19:1.41:1,0,503	0/1:10,5:15:99:205,0,532	0/1:14,0:13:8.16:8,0,298	0/0:17,0:17:3.74:0,4,18	0/0:41,0:41:11.65:0,12,134	0/0:28,0:28:17.54:0,18,311	0/0:17,0:17:2.92:0,3,87	0/0:28,0:28:8.97:0,9,228	0/1:25,0:25:75.22:75,0,283	0/0:37,0:37:99:0,111,3175	0/1:30,0:30:99:295,0,235	0/0:25,0:25:75.26:0,75,2171
chr10	103123841	.	CATT	C	1520.58	PASS	AB=0.980;AC=14;AF=0.250;AN=56;BaseQRankSum=11.244;DP=835;FS=0.496;HRun=0;HaplotypeScore=179.8994;InbreedingCoeff=-0.1455;MQ=52.31;MQ0=17;MQRankSum=-7.192;QD=4.61;ReadPosRankSum=1.231;VQSLOD=2.4002;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:15.70:0,16,182	0/1:12,0:12:74.63:90,0,75	0/0:56,0:13:29.80:0,30,474	0/0:65,0:23:50.69:0,51,770	0/0:27,0:27:72.23:0,72,1643	0/1:32,1:33:43.52:44,0,316	0/0:17,3:20:31.51:0,32,535	0/0:20,0:20:57.13:0,57,1028	0/1:33,1:34:99:132,0,291	0/0:40,0:40:99:0,111,2603	0/0:24,0:24:66.20:0,66,1503	0/0:37,0:37:99:0,102,2311	0/1:23,0:23:99:149,0,165	0/1:34,0:34:99:201,0,291	1/1:27,5:32:41.58:603,42,0	0/0:34,0:34:90.31:0,90,2054	0/1:23,1:24:22.68:23,0,447	0/1:15,3:18:75.80:76,0,365	0/0:14,0:13:7.83:0,8,358	0/1:17,0:17:13.68:105,0,14	0/0:42,1:42:14.98:0,15,186	0/1:29,0:28:28.80:29,0,239	0/1:18,0:18:11.05:11,0,63	0/0:27,0:27:9.97:0,10,179	0/1:26,0:26:52.51:53,0,284	0/0:35,0:35:99:0,105,2233	0/1:30,0:30:99:167,0,207	0/0:27,0:27:81.28:0,81,1857
chr10	103123842	.	AT	A	654.93	PASS	AB=0.997;AC=11;AF=0.196;AN=56;BaseQRankSum=11.129;DP=837;FS=1.104;HRun=2;HaplotypeScore=168.3917;InbreedingCoeff=-0.0442;MQ=52.25;MQ0=18;MQRankSum=-7.091;QD=2.64;ReadPosRankSum=2.049;VQSLOD=0.0227;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:11.47:0,11,108	0/1:12,0:12:26.60:27,0,36	0/0:59,1:15:30.02:0,30,362	0/0:63,2:23:50.59:0,51,550	0/0:27,0:27:69.23:0,69,1034	0/0:32,1:33:5.13:0,5,182	0/0:18,2:20:40.63:0,41,328	0/0:20,0:20:57.12:0,57,725	0/1:33,1:34:34.25:34,0,167	0/0:39,0:39:99:0,114,1686	0/0:24,0:24:63.21:0,63,944	0/0:38,0:38:99:0,102,1484	0/1:23,0:23:27.47:27,0,90	0/1:34,0:34:82.41:82,0,155	1/1:5,24:31:43.56:506,44,0	0/0:34,0:34:90.30:0,90,1332	0/1:24,0:24:5.80:6,0,272	0/1:16,0:16:31.18:31,0,224	0/0:14,0:13:31.07:0,31,375	0/1:17,0:17:16.06:50,0,16	0/0:43,0:42:14.05:0,14,130	0/0:29,0:28:2.50:0,3,136	0/0:18,0:18:7.75:0,8,62	0/0:27,0:27:9.49:0,9,112	0/1:26,0:26:17.05:17,0,157	0/0:35,0:35:99:0,102,1426	0/1:31,0:31:24.02:24,0,174	0/0:27,0:27:81.26:0,81,1193
chr10	103123844	.	T	TAC	3744.94	PASS	AB=0.983;AC=26;AF=0.464;AN=56;BaseQRankSum=8.510;DP=854;FS=6.532;HRun=0;HaplotypeScore=169.5840;InbreedingCoeff=0.2379;MQ=51.37;MQ0=18;MQRankSum=-6.520;QD=7.74;ReadPosRankSum=-3.884;VQSLOD=2.0961;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:38:23.85:102,0,24	1/1:12,0:12:12.72:200,13,0	0/0:60,0:15:11.86:0,12,116	0/0:63,0:23:32.82:0,33,291	0/0:25,0:25:54.16:0,54,636	0/1:31,2:33:14.46:315,0,14	1/1:6,15:22:23.75:552,24,0	1/1:13,1:25:32.98:285,33,0	0/1:34,0:34:22.72:204,0,23	0/0:40,0:40:84.24:0,84,981	0/0:25,0:25:57.14:0,57,649	0/0:35,0:37:75.01:0,75,828	1/1:24,0:24:14.23:244,14,0	0/1:34,0:34:25.28:254,0,25	1/1:31,0:31:21.70:126,22,0	0/0:31,0:34:68.99:0,69,757	0/0:22,0:24:14.88:0,15,268	1/1:7,10:18:1.18:239,1,0	1/1:14,1:15:27.45:301,27,0	1/1:17,0:17:11.88:101,12,0	0/1:43,1:43:21.29:91,0,21	0/1:30,1:30:14.21:260,0,14	0/1:20,0:20:26.57:86,0,27	0/1:28,0:28:26.65:71,0,27	0/1:26,0:26:56.79:168,0,57	0/0:29,0:33:83.57:0,84,895	0/1:30,1:31:32.63:145,0,33	0/0:27,0:27:58.23:0,58,641
chr10	103124615	.	T	TA	2206.71	PASS	AC=34;AF=0.654;AN=52;BaseQRankSum=11.697;DP=308;FS=17.512;HRun=0;HaplotypeScore=67.6636;InbreedingCoeff=0.9231;MQ=57.88;MQ0=2;MQRankSum=-9.731;QD=12.90;ReadPosRankSum=1.437;VQSLOD=3.2743;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,6:18:34.70:250,35,0	1/1:3,1:4:8.89:61,9,0	0/0:10,0:10:6.32:0,6,139	0/0:7,0:5:12.90:0,13,135	0/0:21,0:21:54.79:0,55,675	1/1:6,4:10:21.75:157,22,0	1/1:2,4:5:10.51:94,11,0	1/1:18,2:17:23.30:238,23,0	1/1:6,1:7:17.14:105,17,0	0/0:16,0:16:45.06:0,45,531	0/0:17,0:17:51.01:0,51,625	0/0:21,0:21:60.16:0,60,772	1/1:3,0:3:8.93:66,9,0	1/1:8,3:11:20.17:133,20,0	1/1:6,3:9:23.13:155,23,0	0/0:16,0:16:48.15:0,48,650	1/1:14,4:17:37.64:254,38,0	1/1:10,6:16:35.26:252,35,0	1/1:9,3:12:17.87:137,18,0	1/1:4,3:7:13.37:97,13,0	./.	1/1:4,0:4:8.80:57,9,0	1/1:4,0:4:8.02:39,8,0	./.	1/1:8,3:11:27.12:182,27,0	0/0:16,0:16:48.12:0,48,595	1/1:8,2:10:22.73:135,23,0	0/0:11,0:11:27.13:0,27,343
chr10	103124617	.	T	TA	666.87	PASS	AB=0.795;AC=20;AF=0.385;AN=52;BaseQRankSum=8.297;DP=299;FS=13.307;HRun=0;HaplotypeScore=72.1548;InbreedingCoeff=-0.0163;MQ=57.83;MQ0=2;MQRankSum=-5.411;QD=4.17;ReadPosRankSum=-0.038;VQSLOD=1.8825;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,5:17:4.28:109,0,4	0/1:3,1:4:10.92:22,0,11	0/0:10,0:10:19.12:0,19,179	0/0:7,0:5:12.87:0,13,130	0/0:22,0:22:57.82:0,58,705	0/1:6,3:10:15.85:71,0,16	0/1:2,4:5:6.44:36,0,6	0/1:16,2:15:23.29:62,0,23	0/1:5,1:6:19.03:23,0,19	0/0:16,0:16:45.06:0,45,534	0/0:17,0:17:51.07:0,51,639	0/0:20,0:20:57.17:0,57,750	0/0:2,0:2:1.68:0,2,10	1/1:7,1:10:4.34:60,4,0	0/1:6,3:9:15.69:50,0,16	0/0:17,0:17:48.15:0,48,653	0/1:13,3:16:35.25:36,0,35	0/1:10,6:16:16.07:100,0,16	1/1:8,2:11:0.33:71,0,0	1/1:3,3:6:14.44:90,14,0	./.	1/1:3,0:3:2.87:17,3,0	0/1:4,0:4:4.12:21,0,4	./.	0/1:8,2:11:19.32:46,0,19	0/0:14,0:14:42.12:0,42,543	0/1:9,0:11:11.90:12,0,23	0/0:13,0:13:33.13:0,33,394
chr10	103125404	.	TACACACACAC	T	2641.97	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=3.175;DP=652;FS=3.517;HRun=0;HaplotypeScore=249.1309;InbreedingCoeff=0.5420;MQ=62.61;MQ0=9;MQRankSum=-3.551;QD=6.86;ReadPosRankSum=-0.047;VQSLOD=2.6059;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:32:8.98:72,9,0	1/1:7,0:7:8.92:64,9,0	0/0:47,0:25:9:0,9,83	0/0:35,0:19:12.17:0,12,119	0/0:16,0:19:36.05:0,36,714	0/1:12,0:12:2.65:37,0,3	1/1:23,0:23:3.88:20,4,0	1/1:33,0:32:16.94:410,17,0	0/1:19,0:19:4.12:37,0,4	0/0:29,0:28:69.18:0,69,1713	0/0:17,0:18:45.10:0,45,1470	0/0:19,0:21:42.10:0,42,1347	1/1:16,0:16:7.87:62,8,0	1/1:25,0:25:20.78:144,21,0	0/0:29,0:29:14.69:0,15,136	0/0:18,0:22:51.16:0,51,1745	0/1:21,0:21:58.86:219,0,59	0/1:17,0:17:35.11:48,0,35	1/1:6,11:16:26.87:468,27,0	1/1:3,13:16:11.96:203,12,0	1/1:46,3:50:35.99:461,36,0	1/1:17,0:17:22.01:143,22,0	0/1:20,0:20:22.88:57,0,23	1/1:34,0:34:12.42:95,12,0	0/1:13,0:13:16.99:20,0,17	0/0:36,0:38:69.11:0,69,1435	1/1:1,9:13:15:285,15,0	0/0:9,0:9:21.04:0,21,513
chr10	103125425	.	A	ACT	432.61	PASS	AB=0.965;AC=14;AF=0.250;AN=56;BaseQRankSum=7.225;DP=608;FS=2.438;HRun=0;HaplotypeScore=172.2004;InbreedingCoeff=0.0947;MQ=44.30;MQ0=28;MQRankSum=-3.599;QD=2.13;ReadPosRankSum=2.101;VQSLOD=2.7211;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:11.92:0,12,88	0/1:6,0:6:1.08:1,0,30	0/0:27,0:4:9:0,9,85	0/1:23,0:6:2.72:3,0,105	0/0:21,0:21:44.96:0,45,444	0/1:11,1:12:15.16:42,0,15	0/1:31,1:28:1.70:2,0,30	0/0:36,0:29:81.23:0,81,667	0/1:13,0:13:9.49:38,0,9	0/0:40,0:37:99:0,105,1210	0/0:22,0:21:57.07:0,57,731	0/0:22,0:22:48.05:0,48,562	1/1:11,0:11:6.53:49,7,0	0/1:22,1:24:1.91:2,0,74	1/1:13,12:25:14.91:142,15,0	0/0:28,0:26:42.50:0,42,697	0/0:19,0:19:42.04:0,42,510	0/1:14,1:16:55.02:97,0,55	0/0:16,0:12:33.32:0,33,236	0/0:17,0:17:14.81:0,15,104	0/0:53,0:48:53.49:0,53,521	0/1:10,0:10:15.88:105,0,16	0/1:18,1:19:51.13:60,0,51	0/0:25,0:24:10.76:0,11,77	0/0:10,1:10:5.96:0,6,45	0/0:41,0:40:99:0,108,1027	0/1:12,0:12:34.45:40,0,34	0/0:8,0:8:21.05:0,21,295
chr10	103125427	.	A	ACT	1485.50	PASS	AB=0.978;AC=29;AF=0.518;AN=56;BaseQRankSum=5.171;DP=602;FS=2.339;HRun=0;HaplotypeScore=164.3463;InbreedingCoeff=0.4259;MQ=44.09;MQ0=31;MQRankSum=-2.210;QD=4.15;ReadPosRankSum=-3.290;VQSLOD=2.6288;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,3:18:8.51:71,9,0	1/1:3,3:6:8.93:65,9,0	0/0:23,0:3:9:0,9,83	0/0:21,0:5:12.48:0,12,118	0/0:21,0:21:44.96:0,45,445	1/1:9,3:12:5.99:50,6,0	0/1:27,5:27:12.63:13,0,29	0/1:40,0:30:99:192,0,244	1/1:5,8:13:11.95:114,12,0	0/0:40,0:37:71.96:0,72,1156	0/0:23,0:22:57.09:0,57,735	0/0:22,0:22:51.04:0,51,587	1/1:3,8:11:17.88:155,18,0	1/1:19,4:23:8.52:152,9,0	0/1:25,0:25:8.58:9,0,21	0/0:28,0:26:47.09:0,47,729	0/0:20,0:20:42.05:0,42,510	1/1:14,1:15:4.39:199,4,0	0/1:17,0:12:48.41:48,0,87	0/1:17,0:17:26.47:26,0,28	0/1:54,0:49:60.92:61,0,144	1/1:9,1:10:24.01:262,24,0	1/1:10,7:17:13.80:135,14,0	1/1:21,3:23:12.85:95,13,0	1/1:9,2:10:4.24:29,4,0	0/0:38,0:37:99:0,111,1039	0/1:12,0:12:5.39:5,0,36	0/0:8,0:8:21.05:0,21,294
chr10	103125430	.	C	CAT	563.48	PASS	AB=0.796;AC=14;AF=0.250;AN=56;BaseQRankSum=6.936;DP=593;FS=10.804;HRun=0;HaplotypeScore=157.3787;InbreedingCoeff=0.5191;MQ=43.80;MQ0=34;MQRankSum=-2.653;QD=4.11;ReadPosRankSum=0.435;VQSLOD=2.4958;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,3:14:5.87:0,6,37	0/1:3,3:6:3.09:12,0,3	0/0:21,0:3:6:0,6,66	0/0:22,0:5:9.47:0,9,95	0/0:20,0:20:41.97:0,42,421	1/1:9,3:12:0.18:49,0,0	0/1:25,5:25:5.68:6,0,48	0/0:41,0:28:68.86:0,69,630	1/1:5,7:12:8.88:61,9,0	0/0:41,0:37:99:0,106,1203	0/0:22,0:21:56.97:0,57,723	0/0:23,0:23:54.02:0,54,606	1/1:3,8:11:7.82:91,8,0	0/0:18,4:22:6.51:0,7,56	1/1:26,0:26:11.93:121,12,0	0/0:28,0:26:43.37:0,43,706	0/0:20,0:20:39.04:0,39,480	0/1:13,1:14:66.20:114,0,66	0/0:17,0:12:32.60:0,33,243	0/0:17,0:17:8.91:0,9,72	0/0:56,0:48:54.13:0,54,558	1/1:9,1:10:11.92:199,12,0	0/1:10,6:16:0.98:70,0,1	0/0:19,3:21:4.24:0,4,15	0/0:8,2:9:1.23:0,1,5	0/0:40,0:39:99:0,108,1010	0/0:12,0:12:9.17:0,9,45	0/0:8,0:8:21.05:0,21,294
chr10	103125447	.	ACT	A	474.04	PASS	AB=0.871;AC=16;AF=0.333;AN=48;BaseQRankSum=7.683;DP=522;FS=1.306;HRun=0;HaplotypeScore=136.0195;InbreedingCoeff=0.3967;MQ=41.14;MQ0=55;MQRankSum=-1.426;QD=2.87;ReadPosRankSum=-5.391;VQSLOD=0.7333;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,2:8:0.47:0,0,1	./.	./.	./.	0/0:21,0:21:3.08:0,3,434	./.	0/0:20,6:20:5.97:0,6,132	0/0:38,0:16:22.29:0,22,728	0/0:3,6:9:0.47:0,0,1	0/0:36,0:32:57.12:0,57,1393	0/0:22,0:21:37.29:0,37,861	0/0:27,0:27:46.26:0,46,1032	1/1:6,4:10:5.94:45,6,0	1/1:11,3:13:2.74:12,3,0	1/1:7,12:19:2.64:16,3,0	0/0:34,0:31:77.22:0,77,1227	1/1:22,0:22:16.63:191,17,0	0/1:7,4:11:59.83:92,0,60	0/0:17,0:8:9.84:0,10,98	0/0:19,0:19:5.40:0,5,32	0/1:56,0:46:99:131,0,258	0/1:2,1:3:0:0,0,0	1/1:6,3:9:2.60:10,3,0	0/0:10,2:11:0:0,0,1	1/1:4,2:5:3:25,3,0	0/0:37,0:36:53.95:0,54,1522	0/1:15,0:15:17.85:93,0,18	0/0:8,0:7:20.94:0,21,344
chr10	103125454	.	T	TAC	391.16	PASS	AB=0.982;AC=19;AF=0.380;AN=50;BaseQRankSum=4.150;DP=612;FS=2.901;HRun=0;HaplotypeScore=156.6929;InbreedingCoeff=0.3240;MQ=40.94;MQ0=56;MQRankSum=1.202;QD=1.38;ReadPosRankSum=-4.733;VQSLOD=0.9792;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,1:21:0.40:0,0,1	0/1:6,0:5:0:0,0,0	./.	./.	0/0:22,0:22:33.52:0,34,393	1/1:13,0:12:1.70:22,2,0	0/1:30,5:29:0.60:142,0,1	0/0:41,0:16:30.08:0,30,376	1/1:16,0:16:3.44:24,3,0	0/0:34,0:30:71.87:0,72,874	0/0:21,0:20:42.86:0,43,488	0/0:28,0:28:72.11:0,72,898	0/0:9,0:9:0.87:0,1,2	1/1:25,0:25:6.31:50,6,0	1/1:21,0:25:1.22:3,1,0	0/0:38,0:35:78.59:0,79,1020	0/1:20,0:20:29.64:62,0,30	0/0:14,0:13:5.86:0,6,54	0/0:18,0:6:15.01:0,15,180	0/1:21,0:21:13.30:41,0,13	0/1:59,0:50:99:102,0,171	./.	0/1:16,0:16:0:0,0,0	1/1:18,0:18:2.99:23,3,0	1/1:13,0:12:2.67:26,3,0	0/0:35,1:35:37.43:0,37,981	0/1:14,0:14:36.29:36,0,70	0/0:12,0:11:31.18:0,31,310
chr10	103125495	.	ACT	A	5189.21	PASS	AB=0.593;AC=27;AF=0.482;AN=56;BaseQRankSum=12.784;DP=718;FS=2.866;HRun=0;HaplotypeScore=113.7145;InbreedingCoeff=0.8879;MQ=50.70;MQ0=19;MQRankSum=0.399;QD=19.01;ReadPosRankSum=2.806;VQSLOD=5.2876;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:31:25.69:389,26,0	1/1:1,8:8:12.04:183,12,0	0/0:42,0:14:38.91:0,39,626	0/0:64,1:22:5.98:0,6,218	0/0:29,0:29:64.91:0,65,1065	1/1:0,17:17:27.09:412,27,0	0/1:11,24:32:7.68:591,0,8	0/0:36,0:27:78.11:0,78,1184	1/1:3,18:21:33.58:496,34,0	0/0:30,0:29:81.67:0,82,1385	0/0:18,0:18:51.16:0,51,947	0/0:31,0:31:84.06:0,84,1415	1/1:0,11:11:30.10:440,30,0	1/1:2,17:18:26.97:412,27,0	1/1:2,20:22:24.06:367,24,0	0/0:33,0:32:93.29:0,93,1690	1/1:0,28:28:42.14:639,42,0	1/1:3,13:15:33.11:502,33,0	0/0:9,0:6:17.84:0,18,270	0/0:16,0:16:33.58:0,34,637	0/0:67,0:63:99:0,129,2263	1/1:1,16:17:26.63:412,27,0	1/1:1,11:12:9.01:116,9,0	1/1:2,19:21:8.94:137,9,0	1/1:0,14:14:6.14:92,6,0	0/0:38,0:38:99:0,111,1981	0/0:16,0:16:48.15:0,48,883	0/0:14,0:13:39.06:0,39,691
chr10	103125553	.	TCACACTGACA	T	2347.96	PASS	AB=0.878;AC=25;AF=0.446;AN=56;BaseQRankSum=10.538;DP=895;FS=4.831;HRun=0;HaplotypeScore=226.8291;InbreedingCoeff=0.7629;MQ=56.81;MQ0=31;MQRankSum=-3.661;QD=9.32;ReadPosRankSum=-1.318;VQSLOD=2.3684;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,2:26:19.33:402,19,0	1/1:9,1:8:3.48:51,3,0	0/0:102,0:27:36.80:0,37,1042	0/0:124,0:30:33.83:0,34,816	0/0:25,0:25:54.19:0,54,2351	1/1:19,1:19:11.55:161,12,0	1/1:25,2:25:23.66:350,24,0	0/0:49,0:46:99:0,102,3408	1/1:17,4:21:24.03:401,24,0	0/0:39,0:38:90.30:0,90,3954	0/0:21,0:21:54.19:0,54,2139	0/0:29,0:29:66.23:0,66,2674	1/1:11,1:11:20.83:250,21,0	0/1:10,4:13:0.11:0,0,1	0/1:20,4:23:6.01:105,0,6	0/0:25,0:25:51.16:0,51,2095	0/0:29,0:28:45.03:0,45,1262	1/1:18,3:20:37.15:560,37,0	0/0:22,0:19:51.17:0,51,2013	0/0:28,0:28:75.26:0,75,3069	0/0:86,0:86:99:0,161,6186	1/1:19,3:21:11.68:169,12,0	1/1:6,1:6:3.01:44,3,0	1/1:16,5:21:2.09:47,2,0	1/1:13,0:13:0.94:3,1,0	0/0:39,0:39:99:0,99,4214	0/0:23,0:23:54.19:0,54,2161	0/1:14,0:14:0.20:0,0,818
chr10	103125568	.	CTG	C	633.76	PASS	AB=0.963;AC=24;AF=0.429;AN=56;BaseQRankSum=10.828;DP=848;FS=0.000;HRun=0;HaplotypeScore=135.7440;InbreedingCoeff=0.5713;MQ=53.96;MQ0=31;MQRankSum=-1.341;QD=2.99;ReadPosRankSum=-4.415;VQSLOD=0.3241;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:12.58:99,13,0	0/1:9,0:7:7.57:19,0,8	0/0:111,2:25:59.36:0,59,964	0/0:118,1:26:46.25:0,46,742	0/0:23,0:23:66.22:0,66,1262	1/1:14,0:13:6.35:51,6,0	1/1:21,1:22:16.81:115,17,0	0/0:47,0:46:99:0,138,2664	1/1:19,0:19:7.01:107,7,0	0/0:37,0:37:99:0,111,2117	0/0:21,0:21:63.22:0,63,1215	0/0:29,0:29:78.27:0,78,1545	1/1:11,0:10:17.70:137,18,0	1/1:12,1:12:1.60:4,2,0	0/1:18,2:19:39.96:40,0,53	0/0:22,0:22:63.20:0,63,1231	0/0:27,0:26:45.15:0,45,783	0/1:16,1:16:35.18:98,0,35	0/0:23,0:21:63.10:0,63,1158	0/0:35,0:35:99:0,99,1923	0/0:76,0:76:99:0,183,3558	1/1:18,0:18:9.45:75,9,0	1/1:5,1:5:2.98:22,3,0	1/1:18,0:18:2.99:24,3,0	1/1:12,0:12:2.68:18,3,0	0/0:39,0:39:99:0,117,2297	0/0:24,0:24:69.24:0,69,1315	0/1:7,0:7:16.43:16,0,345
chr10	103125596	.	CAT	C	436.44	PASS	AB=0.966;AC=17;AF=0.315;AN=54;BaseQRankSum=9.265;DP=744;FS=30.343;HRun=0;HaplotypeScore=155.1875;InbreedingCoeff=0.3531;MQ=45.38;MQ0=31;MQRankSum=-7.095;QD=2.06;ReadPosRankSum=-2.169;VQSLOD=1.0474;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:3.46:26,3,0	1/1:12,0:11:5.07:34,5,0	0/0:55,0:7:14.27:0,14,85	0/0:66,0:6:13.20:0,13,130	0/0:16,0:16:45.15:0,45,818	0/0:17,0:16:1.93:0,2,14	0/1:23,1:24:19.77:34,0,20	0/0:50,0:43:74.20:0,74,1644	1/1:12,0:12:2.58:37,3,0	0/0:41,0:41:99:0,120,1909	0/0:19,0:19:54.14:0,54,905	0/0:30,0:30:78.24:0,78,1374	0/1:7,0:7:5.74:32,0,6	0/1:24,1:25:18.02:26,0,18	0/1:25,0:24:28.49:55,0,28	0/0:34,0:34:96.22:0,96,1701	1/1:14,5:18:21.38:202,21,0	0/1:13,0:12:19.08:66,0,19	0/0:29,0:26:72.16:0,72,1186	0/0:40,0:40:99:0,105,1818	0/0:54,0:54:99:0,119,2053	1/1:19,0:18:5.99:50,6,0	./.	0/1:17,1:18:0.14:0,0,0	0/1:13,0:13:3.42:35,0,3	0/0:42,0:42:99:0,100,1908	0/0:20,0:20:42.72:0,43,976	0/0:10,0:9:5.29:0,5,248
chr10	103125616	.	CAT	C	1972.40	PASS	AB=0.985;AC=32;AF=0.571;AN=56;BaseQRankSum=12.701;DP=676;FS=37.351;HRun=0;HaplotypeScore=151.4801;InbreedingCoeff=0.3106;MQ=50.74;MQ0=24;MQRankSum=-2.578;QD=4.88;ReadPosRankSum=-0.883;VQSLOD=1.5539;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:8.98:71,9,0	1/1:6,3:9:9.42:70,9,0	0/0:33,0:7:10.26:0,10,124	0/0:46,0:11:9.93:0,10,222	0/0:19,0:19:54.12:0,54,855	1/1:16,2:17:1:51,1,0	1/1:20,1:21:3.56:161,4,0	0/1:49,0:41:99:124,0,342	1/1:10,0:10:11.83:103,12,0	0/0:45,0:44:99:0,127,1859	0/0:18,0:18:54.12:0,54,873	0/0:31,0:31:68.63:0,69,1083	0/1:8,0:8:0.24:76,0,0	0/1:24,3:27:30.08:120,0,30	1/1:22,1:23:0.87:131,1,0	0/0:39,0:39:99:0,105,1766	1/1:20,0:20:27.81:242,28,0	1/1:12,0:11:13.92:104,14,0	0/1:27,0:24:61.64:62,0,182	0/1:36,0:36:99:169,0,177	0/1:46,1:46:99:209,0,168	1/1:9,3:11:14.97:122,15,0	1/1:9,0:9:9.43:69,9,0	1/1:14,2:16:2.94:24,3,0	1/1:14,0:14:5.78:106,6,0	0/0:41,0:40:92.59:0,93,1590	0/1:21,0:21:24.04:138,0,24	0/1:6,0:5:3.94:4,0,215
chr10	103125618	.	TAC	T	2786.91	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=6.330;DP=668;FS=0.000;HRun=0;HaplotypeScore=148.7484;InbreedingCoeff=0.4915;MQ=51.17;MQ0=23;MQRankSum=-0.322;QD=10.13;ReadPosRankSum=2.658;VQSLOD=3.1767;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:0.93:0,1,2	0/1:8,0:8:4.63:5,0,17	0/0:33,0:7:4.39:0,4,127	0/0:47,0:12:32.38:0,32,396	0/0:20,0:20:45.14:0,45,686	0/0:16,0:16:7.81:0,8,54	0/1:18,0:19:6.82:7,0,69	1/1:26,17:36:47.87:532,48,0	0/1:11,0:11:14.28:14,0,19	0/0:45,0:45:96.15:0,96,1362	0/0:18,0:18:42.14:0,42,663	0/0:29,1:30:27.66:0,28,858	0/1:7,0:7:0.40:0,0,36	0/0:28,0:28:5.37:0,5,126	1/1:25,0:25:2.79:23,3,0	0/0:39,0:39:96.30:0,96,1469	0/1:18,0:18:10:55,0,10	0/0:12,0:11:8.73:0,9,79	1/1:13,13:23:39.04:432,39,0	1/1:11,24:36:66:760,66,0	1/1:18,25:42:56.78:670,57,0	0/0:13,0:13:5.73:0,6,48	0/0:10,0:10:7.54:0,8,51	0/1:17,0:17:0.16:0,0,0	0/0:13,0:13:4.86:0,5,36	0/0:41,0:40:80.94:0,81,1233	1/1:5,14:21:44.24:463,44,0	0/0:6,0:5:12.04:0,12,190
chr10	103126929	.	T	TG	11836.61	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=17.001;DP=613;FS=0.983;HRun=1;HaplotypeScore=80.7103;InbreedingCoeff=0.9998;MQ=86.24;MQ0=0;MQRankSum=-4.274;QD=35.98;ReadPosRankSum=4.038;VQSLOD=5.1454;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,42:44:99:1492,106,0	1/1:0,9:9:27.09:385,27,0	0/0:20,0:20:56.55:0,57,742	0/0:19,0:19:57.13:0,57,714	0/0:13,0:13:39.12:0,39,526	1/1:0,13:13:39.13:555,39,0	1/1:1,34:35:78.26:1106,78,0	0/0:25,0:25:72.24:0,72,1002	1/1:0,31:31:81.27:1145,81,0	0/0:19,0:19:57.18:0,57,782	0/0:17,0:17:51.16:0,51,687	0/0:25,0:25:72.24:0,72,1005	1/1:0,27:27:69.23:978,69,0	1/1:0,26:26:72.24:1019,72,0	1/1:1,18:19:50.77:721,51,0	0/0:20,0:20:54.18:0,54,755	1/1:2,25:27:67.11:940,67,0	1/1:0,16:16:42.14:592,42,0	0/0:13,0:13:39.13:0,39,543	0/0:14,0:14:39.13:0,39,546	0/0:40,0:40:99:0,117,1585	1/1:1,19:20:56.78:775,57,0	1/1:0,16:16:44.97:608,45,0	1/1:1,15:15:39.13:550,39,0	1/1:4,26:30:69.23:970,69,0	0/0:23,0:23:69.23:0,69,963	0/0:20,0:20:60.20:0,60,836	0/0:16,0:16:48.16:0,48,668
chr10	103127459	.	GC	G	7362.55	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=16.431;DP=551;FS=70.797;HRun=1;HaplotypeScore=105.2792;InbreedingCoeff=0.9966;MQ=81.99;MQ0=0;MQRankSum=-15.235;QD=34.89;ReadPosRankSum=-1.048;VQSLOD=-0.6381;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:45.10:604,45,0	1/1:0,5:5:15.05:209,15,0	0/0:22,0:22:65.53:0,66,936	0/0:23,0:23:59.46:0,59,950	0/0:31,0:31:90.27:0,90,1385	1/1:1,11:12:30.02:379,30,0	1/1:0,15:15:42.09:562,42,0	0/0:32,0:32:96.25:0,96,1422	1/1:3,13:16:45.06:570,45,0	0/0:39,0:39:99:0,111,1713	0/0:21,0:21:63.17:0,63,933	0/0:24,0:24:72.23:0,72,1122	1/1:0,18:18:48.09:641,48,0	1/1:1,18:19:48.05:643,48,0	1/1:0,12:12:33.11:460,33,0	0/0:15,0:15:45.15:0,45,719	1/1:0,14:14:36.12:502,36,0	1/1:0,13:13:39.13:548,39,0	0/0:19,0:19:55.43:0,55,867	0/0:31,0:31:93.29:0,93,1432	0/0:42,0:42:99:0,126,2013	1/1:1,16:17:45.08:603,45,0	1/1:0,15:15:39.13:544,39,0	1/1:0,19:19:39.04:519,39,0	1/1:1,17:18:45.01:579,45,0	0/0:18,0:18:54.16:0,54,818	0/0:17,0:16:51.10:0,51,716	0/0:6,0:6:18.06:0,18,279
chr10	103127486	.	TCCAA	T	6295.41	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=15.205;DP=491;FS=116.625;HRun=0;HaplotypeScore=131.8590;InbreedingCoeff=0.9684;MQ=82.23;MQ0=0;MQRankSum=-14.546;QD=38.86;ReadPosRankSum=2.241;VQSLOD=1.8625;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,15:20:33.11:652,33,0	1/1:3,1:4:6.02:118,6,0	0/0:16,0:16:39.11:0,39,1013	0/0:24,0:24:49.39:0,49,1515	0/0:25,0:25:75.26:0,75,2072	1/1:0,8:8:15.05:293,15,0	1/1:1,9:10:15.05:299,15,0	0/0:35,0:35:99:0,99,2706	1/1:0,13:13:33.11:646,33,0	0/0:30,0:30:84.29:0,84,2301	0/0:20,0:20:60.21:0,60,1632	0/0:23,0:23:69.24:0,69,1930	1/1:2,18:20:48.16:958,48,0	1/1:3,12:15:30.09:558,30,0	1/1:2,6:8:18.06:354,18,0	0/0:16,0:16:48.16:0,48,1343	1/1:2,10:12:12.04:239,12,0	1/1:5,5:10:18.04:316,18,0	0/0:16,0:16:48.16:0,48,1278	0/0:36,0:36:99:0,102,2704	0/0:42,0:42:99:0,126,3350	1/1:2,11:13:33.11:653,33,0	1/1:1,6:7:15.04:256,15,0	1/1:0,9:9:12.04:239,12,0	1/1:1,12:13:36.12:715,36,0	0/0:18,0:18:51.18:0,51,1399	0/0:16,0:16:48.16:0,48,1296	0/0:12,0:12:36.12:0,36,1007
chr10	103127542	.	AGG	A	4074.10	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=14.133;DP=362;FS=104.151;HRun=4;HaplotypeScore=92.8028;InbreedingCoeff=0.9211;MQ=61.98;MQ0=0;MQRankSum=-13.596;QD=34.53;ReadPosRankSum=1.451;VQSLOD=-0.6451;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:33.11:484,33,0	1/1:1,1:3:6.02:88,6,0	0/0:7,0:6:9.14:0,9,175	0/0:8,0:8:11.81:0,12,218	0/0:14,0:14:39.12:0,39,699	1/1:0,10:10:30.10:440,30,0	1/1:1,7:8:18.06:264,18,0	0/0:31,0:31:84.23:0,84,1421	1/1:2,9:11:24.08:337,24,0	0/0:17,0:17:51.17:0,51,955	0/0:16,0:16:42.13:0,42,722	0/0:24,0:24:69.24:0,69,1274	1/1:0,9:9:27.09:396,27,0	1/1:2,7:9:18.06:263,18,0	1/1:0,8:8:24.08:352,24,0	0/0:10,0:10:27.09:0,27,506	1/1:2,6:8:6.02:88,6,0	1/1:1,2:3:6.02:88,6,0	0/0:16,0:16:48.16:0,48,864	0/0:18,0:18:51.15:0,51,893	0/0:32,0:32:93.32:0,93,1741	1/1:1,6:7:15.05:220,15,0	1/1:0,4:4:12.04:176,12,0	1/1:2,4:6:6.02:88,6,0	1/1:2,18:20:54.18:791,54,0	0/0:22,0:22:66.20:0,66,1150	0/0:14,0:14:42.13:0,42,756	0/0:15,0:15:45.13:0,45,780
chr10	103127688	.	CTGA	C	505.59	PASS	AB=0.782;AC=11;AF=0.196;AN=56;BaseQRankSum=7.471;DP=399;FS=59.375;HRun=0;HaplotypeScore=127.3338;InbreedingCoeff=-0.0975;MQ=81.06;MQ0=2;MQRankSum=-5.407;QD=6.74;ReadPosRankSum=3.902;VQSLOD=0.3612;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,2:10:42.57:43,0,177	0/1:10,1:11:20.94:21,0,607	0/0:22,0:17:43.95:0,44,725	0/0:20,0:16:33.68:0,34,590	0/0:22,0:22:54.17:0,54,1215	1/1:5,1:6:3.01:52,3,0	0/0:3,0:3:9.03:0,9,212	0/0:24,0:24:57.18:0,57,1300	0/1:3,2:5:83.29:83,0,97	0/0:25,0:25:75.25:0,75,1687	0/0:11,0:11:33.11:0,33,780	0/0:18,0:18:54.19:0,54,1262	0/1:4,1:5:46.85:47,0,48	0/1:3,1:4:31.68:32,0,116	0/1:1,4:5:55.67:185,0,56	0/0:15,0:15:36.12:0,36,829	0/1:8,4:12:58.21:126,0,58	0/1:6,3:9:27.31:27,0,61	0/0:12,0:12:36.12:0,36,794	0/0:16,0:16:45.15:0,45,1032	0/0:25,0:25:75.23:0,75,1677	0/0:24,0:24:60.21:0,60,1415	0/0:19,0:19:48.16:0,48,1109	0/1:7,1:8:36.79:37,0,128	0/0:23,0:22:60.21:0,60,1397	0/0:23,0:23:57.08:0,57,1299	0/0:20,0:20:57.20:0,57,1270	0/0:1,0:1:3.01:0,3,71
chr10	103127708	.	TTTTTTG	T	4122.40	PASS	AB=0.787;AC=20;AF=0.357;AN=56;BaseQRankSum=7.025;DP=459;FS=159.742;HRun=0;HaplotypeScore=156.8998;InbreedingCoeff=0.4316;MQ=61.11;MQ0=2;MQRankSum=-10.810;QD=21.14;ReadPosRankSum=2.132;VQSLOD=0.5253;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,18:23:58.92:965,59,0	0/1:6,1:7:37.15:37,0,142	0/0:23,0:13:36.11:0,36,587	0/0:16,0:12:24.03:0,24,329	0/0:21,0:21:63.19:0,63,1644	0/1:7,3:10:99:170,0,121	0/1:5,5:10:6.27:326,0,6	0/0:24,0:24:69.20:0,69,1408	1/1:3,3:6:18:240,18,0	0/0:26,0:26:75.25:0,75,1939	0/0:18,0:18:54.16:0,54,1364	0/0:19,0:19:53.89:0,54,1391	0/1:1,5:6:37.81:210,0,38	1/1:3,5:8:23.96:337,24,0	1/1:2,10:12:36.03:601,36,0	0/0:18,0:18:51.16:0,51,1295	0/1:7,8:15:0.57:382,0,1	1/1:3,6:9:21:275,21,0	0/0:17,0:17:51.16:0,51,1081	0/0:15,0:15:45.13:0,45,915	0/0:21,0:21:60.15:0,60,1193	0/1:21,0:21:16.67:17,0,339	0/1:18,2:20:91.22:91,0,282	1/1:12,7:19:33.64:364,34,0	0/1:25,4:27:99:107,0,528	0/0:25,0:25:75.23:0,75,1607	0/0:17,0:17:48.15:0,48,1013	0/0:4,0:4:12.04:0,12,329
chr10	103127785	.	GTCC	G	7265.94	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=14.448;DP=458;FS=7.693;HRun=0;HaplotypeScore=89.0168;InbreedingCoeff=0.9705;MQ=62.53;MQ0=0;MQRankSum=-9.012;QD=37.26;ReadPosRankSum=4.562;VQSLOD=5.6908;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:60.20:979,60,0	1/1:0,2:3:3.01:49,3,0	0/0:16,0:16:39.10:0,39,824	0/0:23,0:23:69.10:0,69,1402	0/0:14,0:14:39.13:0,39,813	1/1:0,8:9:24.08:380,24,0	1/1:2,12:14:30.10:490,30,0	0/0:25,0:25:69.24:0,69,1542	1/1:1,8:9:24.08:392,24,0	0/0:14,0:14:39.13:0,39,871	0/0:18,0:18:42.14:0,42,918	0/0:10,0:10:30.10:0,30,670	1/1:0,8:9:21.07:342,21,0	1/1:1,10:11:27.09:440,27,0	1/1:2,10:12:24.08:376,24,0	0/0:18,0:18:54.19:0,54,1206	1/1:0,22:22:63.22:1027,63,0	1/1:1,14:15:39.13:637,39,0	0/0:17,0:17:48.15:0,48,978	0/0:23,0:23:63.22:0,63,1351	0/0:34,0:34:99:0,102,2244	1/1:2,12:14:21.07:343,21,0	1/1:1,7:8:15.05:245,15,0	1/1:1,31:32:78.27:1274,78,0	1/1:2,9:11:18.06:294,18,0	0/0:20,0:20:60.20:0,60,1299	0/0:22,0:22:63.22:0,63,1407	0/0:9,0:9:27.07:0,27,559
chr10	103127954	.	TTTTTTG	T	3527.80	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=15.617;DP=506;FS=8.691;HRun=0;HaplotypeScore=128.6276;InbreedingCoeff=0.8441;MQ=63.49;MQ0=1;MQRankSum=-13.349;QD=15.47;ReadPosRankSum=9.244;VQSLOD=0.8680;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:2:322,0,2	1/1:5,0:5:14.96:124,15,0	0/0:18,0:15:32.16:0,32,716	0/0:14,0:6:9.03:0,9,189	0/0:27,0:27:78.18:0,78,2126	1/1:18,1:19:48:453,48,0	1/1:21,1:22:14.30:412,14,0	0/0:26,0:26:78.26:0,78,2278	1/1:12,0:12:7.48:215,7,0	0/0:25,0:25:72.23:0,72,1928	0/0:23,0:23:69.21:0,69,1931	0/0:15,0:15:42.12:0,42,1160	1/1:22,0:22:22.16:312,22,0	1/1:9,1:10:14.97:170,15,0	1/1:22,0:21:19.18:289,19,0	0/0:20,0:20:57.17:0,57,1540	1/1:25,0:25:8.12:210,8,0	1/1:20,0:20:19.10:285,19,0	0/0:9,0:9:27.09:0,27,852	0/0:25,0:25:75.20:0,75,1879	0/0:11,0:11:33.06:0,33,932	1/1:9,1:10:7.11:216,7,0	1/1:9,0:9:4.18:161,4,0	1/1:17,0:17:9.99:197,10,0	0/1:10,0:10:0.03:162,0,0	0/0:31,0:31:92.99:0,93,2294	0/0:21,0:21:54.17:0,54,1587	0/0:13,0:13:39:0,39,1128
chr10	103127955	.	TTTTTG	T	8068.29	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=13.006;DP=491;FS=10.732;HRun=0;HaplotypeScore=101.6391;InbreedingCoeff=0.9897;MQ=62.97;MQ0=1;MQRankSum=-13.799;QD=37.35;ReadPosRankSum=8.634;VQSLOD=3.2888;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:35.10:808,35,0	1/1:0,5:5:15.01:256,15,0	0/0:18,0:15:31.92:0,32,586	0/0:13,0:5:12.03:0,12,176	0/0:29,0:29:81.14:0,81,1827	1/1:1,18:19:48.16:925,48,0	1/1:1,18:19:48.12:885,48,0	0/0:25,0:25:75.21:0,75,1896	1/1:1,9:10:30.06:552,30,0	0/0:24,0:24:66.21:0,66,1548	0/0:22,0:22:63.22:0,63,1578	0/0:14,0:14:39.12:0,39,963	1/1:0,21:21:39.13:763,39,0	1/1:1,9:10:15.02:276,15,0	1/1:0,22:22:36.08:707,36,0	0/0:21,0:21:60.14:0,60,1315	1/1:1,20:21:26.09:530,26,0	1/1:0,19:19:36.08:669,36,0	0/0:10,0:10:30.10:0,30,752	0/0:26,0:26:75.18:0,75,1591	0/0:10,0:10:30.07:0,30,794	1/1:1,9:10:23.94:375,24,0	1/1:0,9:9:21.03:413,21,0	1/1:5,13:18:29.86:475,30,0	1/1:1,8:9:24.04:434,24,0	0/0:29,0:29:77.99:0,78,1849	0/0:21,0:21:54.15:0,54,1337	0/0:13,0:13:38.98:0,39,958
chr10	103127956	.	TTTTG	T	4960.53	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=15.037;DP=495;FS=8.725;HRun=0;HaplotypeScore=105.4161;InbreedingCoeff=0.9918;MQ=65.81;MQ0=1;MQRankSum=-14.220;QD=22.97;ReadPosRankSum=8.897;VQSLOD=2.6165;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,2:24:36.33:522,36,0	1/1:5,0:5:15:158,15,0	0/0:20,0:17:37.82:0,38,511	0/0:14,0:6:14.84:0,15,154	0/0:31,0:31:86.87:0,87,1548	1/1:19,0:19:48.14:550,48,0	1/1:19,0:19:48.10:535,48,0	0/0:26,0:26:77.05:0,77,1578	1/1:9,1:10:30.09:363,30,0	0/0:23,0:23:60.04:0,60,1201	0/0:21,0:21:63.18:0,63,1275	0/0:15,0:15:42.12:0,42,817	1/1:21,0:21:39.11:443,39,0	1/1:10,0:10:15.02:172,15,0	1/1:22,0:21:36.08:411,36,0	0/0:22,0:22:60.14:0,60,1087	1/1:21,0:21:26.63:309,27,0	1/1:19,0:19:36.06:398,36,0	0/0:11,0:11:33.10:0,33,654	0/0:26,0:26:72.17:0,72,1305	0/0:11,0:11:33.06:0,33,706	1/1:10,0:10:23.95:246,24,0	1/1:9,0:9:21.04:241,21,0	1/1:18,0:18:32.81:319,33,0	1/1:8,1:9:24.07:294,24,0	0/0:26,0:26:77.95:0,78,1530	0/0:20,0:20:51.12:0,51,1080	0/0:13,0:13:38.98:0,39,802
chr10	103128173	.	A	AT	16780.45	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=18.677;DP=737;FS=0.557;HRun=0;HaplotypeScore=98.5585;InbreedingCoeff=0.9994;MQ=86.56;MQ0=0;MQRankSum=-5.059;QD=44.63;ReadPosRankSum=4.665;VQSLOD=4.5138;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,65:66:99:2733,172,0	1/1:1,7:8:21.07:333,21,0	0/0:25,0:25:72.69:0,73,966	0/0:29,0:29:71.97:0,72,955	0/0:22,0:22:66.20:0,66,904	1/1:0,18:18:54.18:862,54,0	1/1:0,30:30:87.30:1390,87,0	0/0:29,0:29:84.27:0,84,1146	1/1:0,28:28:81.28:1294,81,0	0/0:27,0:27:75.24:0,75,1033	0/0:15,0:15:45.14:0,45,612	0/0:23,0:23:69.22:0,69,947	1/1:0,20:20:54.18:863,54,0	1/1:1,21:22:66.19:1028,66,0	1/1:0,33:33:99:1581,99,0	0/0:26,0:26:78.26:0,78,1090	1/1:1,32:33:84.29:1343,84,0	1/1:0,34:34:99:1581,99,0	0/0:24,0:24:69.22:0,69,938	0/0:18,0:18:54.18:0,54,754	0/0:47,0:47:99:0,141,1953	1/1:0,16:16:45.15:714,45,0	1/1:0,14:14:42.14:663,42,0	1/1:0,35:35:96.33:1534,96,0	1/1:0,19:19:54.18:861,54,0	0/0:36,0:36:99:0,108,1494	0/0:26,0:26:69.20:0,69,931	0/0:14,0:14:36.12:0,36,503
chr10	103128447	.	AC	A	5284.37	PASS	AB=0.920;AC=29;AF=0.518;AN=56;BaseQRankSum=16.222;DP=540;FS=27.376;HRun=3;HaplotypeScore=155.8412;InbreedingCoeff=0.9389;MQ=77.70;MQ0=0;MQRankSum=-15.307;QD=23.08;ReadPosRankSum=3.504;VQSLOD=2.8172;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,16:20:33.10:405,33,0	1/1:1,13:14:33.10:407,33,0	0/0:17,0:16:48.16:0,48,679	0/0:16,0:16:34.66:0,35,462	0/0:31,0:31:87.29:0,87,1249	1/1:0,14:14:33.10:407,33,0	1/1:0,16:16:30.09:370,30,0	0/0:32,0:32:90.30:0,90,1291	1/1:1,13:13:27.08:333,27,0	0/0:24,0:24:72.23:0,72,998	0/0:19,0:19:54.15:0,54,713	0/0:20,0:20:57.18:0,57,802	1/1:0,13:12:33.10:403,33,0	1/1:1,16:17:39.12:482,39,0	1/1:0,11:10:27.08:329,27,0	0/1:21,2:23:5.25:5,0,838	1/1:1,11:12:27.08:334,27,0	1/1:1,11:12:30.09:359,30,0	0/0:30,0:30:84.26:0,84,1175	0/0:26,0:26:78.25:0,78,1101	0/0:25,0:25:75.23:0,75,1053	1/1:3,9:12:21.07:259,21,0	1/1:0,9:9:12.04:149,12,0	1/1:1,13:14:20.96:261,21,0	1/1:2,26:28:63.20:779,63,0	0/0:20,0:20:57.18:0,57,803	0/0:33,0:33:96.32:0,96,1371	0/0:18,0:18:54.18:0,54,777
chr10	103128456	.	CTCCGATATAAAATGA	C	16954.44	PASS	AB=0.955;AC=29;AF=0.518;AN=56;BaseQRankSum=16.604;DP=506;FS=25.608;HRun=0;HaplotypeScore=254.4104;InbreedingCoeff=0.9197;MQ=78.25;MQ0=0;MQRankSum=-16.414;QD=87.39;ReadPosRankSum=5.002;VQSLOD=2.7822;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,8:15:27.07:1100,27,0	1/1:3,7:10:21.07:942,21,0	0/0:15,0:15:42.14:0,42,2175	0/0:16,0:16:46.04:0,46,2209	0/0:35,0:35:99:0,102,6595	1/1:2,12:14:36.12:1546,36,0	1/1:5,8:13:30.09:1099,30,0	0/0:30,0:30:90.26:0,90,5439	1/1:1,12:12:30.10:1277,30,0	0/0:23,0:23:69.24:0,69,5125	0/0:18,0:18:51.17:0,51,3389	0/0:20,0:20:60.21:0,60,3995	1/1:1,12:12:33.11:1478,33,0	1/1:3,13:16:39.13:1750,39,0	1/1:2,9:10:27.09:1208,27,0	0/1:20,1:21:74.79:75,0,3994	1/1:4,4:8:15.05:578,15,0	1/1:0,9:9:27.09:1208,27,0	0/0:27,0:27:75.24:0,75,4737	0/0:27,0:27:81.28:0,81,5731	0/0:25,0:25:75.24:0,75,4868	1/1:0,9:9:27.09:1062,27,0	1/1:1,7:8:18.06:645,18,0	1/1:4,6:10:12.04:540,12,0	1/1:5,19:24:57.20:2447,57,0	0/0:22,0:22:66.23:0,66,4254	0/0:36,0:36:99:0,102,6880	0/0:18,0:18:51.17:0,51,3826
chr10	103128566	.	GAGTGGCCCA	G	10980.17	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=15.729;DP=484;FS=0.000;HRun=0;HaplotypeScore=152.1444;InbreedingCoeff=0.9829;MQ=87.11;MQ0=0;MQRankSum=-15.613;QD=65.75;ReadPosRankSum=3.865;VQSLOD=4.8249;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:15:30.10:902,30,0	1/1:0,11:11:30.10:903,30,0	0/0:23,0:23:51.22:0,51,2597	0/0:16,0:16:37.94:0,38,1684	0/0:20,0:20:60.21:0,60,2798	1/1:1,3:4:9.03:276,9,0	1/1:2,12:14:30.10:913,30,0	0/0:29,0:29:78.27:0,78,3414	1/1:3,8:11:21.07:643,21,0	0/0:26,0:26:78.27:0,78,3578	0/0:17,0:17:48.13:0,48,2078	0/0:18,0:18:54.19:0,54,2480	1/1:3,5:8:12.04:367,12,0	1/1:2,12:14:36.12:1086,36,0	1/1:2,17:18:45.15:1361,45,0	0/0:29,0:29:81.26:0,81,3798	1/1:1,10:11:24.08:735,24,0	1/1:1,7:8:15.05:459,15,0	0/0:21,0:21:60.21:0,60,2788	0/0:22,0:22:66.23:0,66,3135	0/0:28,0:28:84.29:0,84,3993	1/1:2,13:15:39.13:1115,39,0	1/1:3,11:14:33.11:936,33,0	1/1:2,9:11:18.06:550,18,0	1/1:2,10:12:24.08:735,24,0	0/0:37,0:37:99:0,108,4832	0/0:23,0:23:69.24:0,69,3323	0/0:8,0:8:24.08:0,24,1168
chr10	103129575	.	AGT	A	5946.73	PASS	AB=0.919;AC=29;AF=0.518;AN=56;BaseQRankSum=11.565;DP=678;FS=6.388;HRun=0;HaplotypeScore=135.3788;InbreedingCoeff=0.8878;MQ=57.67;MQ0=7;MQRankSum=-0.112;QD=18.02;ReadPosRankSum=6.291;VQSLOD=4.5785;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,17:24:17.68:199,18,0	1/1:1,10:12:29.93:346,30,0	0/0:46,1:24:33.59:0,34,411	0/0:46,0:25:33.23:0,33,320	0/0:23,1:24:12.79:0,13,676	1/1:2,23:25:60.19:738,60,0	1/1:3,18:22:32.78:406,33,0	0/0:26,0:26:48.13:0,48,744	1/1:3,18:20:34.23:382,34,0	0/0:26,0:26:63.21:0,63,1019	0/0:18,0:18:48.13:0,48,724	0/0:20,0:20:54.18:0,54,881	1/1:2,14:16:39.12:480,39,0	1/1:6,8:15:17.88:186,18,0	1/1:3,19:22:42.13:517,42,0	0/0:18,0:18:51.17:0,51,817	1/1:3,12:15:29.96:369,30,0	1/1:5,10:15:39.08:462,39,0	0/0:15,0:14:0.51:0,1,360	0/0:21,0:21:51.12:0,51,774	0/0:36,1:37:65.38:0,65,1504	1/1:6,19:26:50.99:605,51,0	1/1:6,22:29:12.38:279,12,0	1/1:7,23:30:32.80:405,33,0	1/1:4,18:23:47.36:561,47,0	0/1:31,3:34:10.28:10,0,1181	0/0:23,0:23:51.17:0,51,828	0/0:23,1:26:13.92:0,14,718
chr10	103129626	.	A	AGTGAGGGTCAGGTCAGAGC	37173.93	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=7.130;DP=715;FS=36.910;HRun=0;HaplotypeScore=353.1656;InbreedingCoeff=0.9950;MQ=57.36;MQ0=5;MQRankSum=-17.666;QD=113.68;ReadPosRankSum=-6.272;VQSLOD=2.5420;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:23,6:32:63.69:4185,64,0	1/1:9,6:16:42.13:2799,42,0	0/0:37,0:20:48.16:0,48,1543	0/0:55,0:33:47.63:0,48,1974	0/0:18,0:18:48.16:0,48,2353	1/1:15,6:22:42.14:2319,42,0	1/1:25,4:30:72.23:3799,72,0	0/0:37,0:36:99:0,99,4487	1/1:15,11:27:66.23:4284,66,0	0/0:22,0:22:60.21:0,60,2929	0/0:20,0:20:60.21:0,60,2965	0/0:24,0:24:69.24:0,69,3237	1/1:19,4:23:54.19:3515,54,0	1/1:11,13:25:48.16:2844,48,0	1/1:22,3:25:51.16:2466,51,0	0/0:24,0:24:69.24:0,69,3590	1/1:9,7:17:45.15:2850,45,0	1/1:8,4:12:30.10:2378,30,0	0/0:14,0:14:36.11:0,36,1527	0/0:17,0:17:45.13:0,45,2103	0/0:44,0:44:99:0,126,6042	1/1:12,8:21:27.09:1441,27,0	1/1:19,3:23:12.80:775,13,0	1/1:17,7:26:17.73:1202,18,0	1/1:15,10:26:45.13:2318,45,0	0/0:26,0:26:69.22:0,69,3307	0/0:31,0:31:75.24:0,75,3601	0/0:17,0:17:51.18:0,51,2733
chr10	103129795	.	CCA	C	11449.86	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=12.511;DP=602;FS=10.130;HRun=0;HaplotypeScore=78.4878;InbreedingCoeff=0.9977;MQ=83.75;MQ0=3;MQRankSum=-3.876;QD=36.94;ReadPosRankSum=4.297;VQSLOD=7.0226;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,42:43:99:1514,99,0	1/1:2,5:7:15.04:229,15,0	0/0:23,0:23:62.94:0,63,1026	0/0:16,0:16:45.14:0,45,792	0/0:19,0:19:50.96:0,51,829	1/1:0,17:17:45.15:688,45,0	1/1:0,18:18:48.16:733,48,0	0/0:17,0:17:42.14:0,42,772	1/1:0,21:21:51.17:780,51,0	0/0:24,0:24:72.22:0,72,1279	0/0:15,0:15:36.12:0,36,654	0/0:18,0:18:51.16:0,51,915	1/1:0,18:18:48.16:733,48,0	1/1:0,26:26:57.19:860,57,0	1/1:1,15:15:42.14:642,42,0	0/0:17,0:17:51.15:0,51,888	1/1:0,40:39:99:1515,99,0	1/1:0,19:19:42.14:643,42,0	0/0:20,0:20:60.13:0,60,986	0/0:14,0:14:36.07:0,36,618	0/0:36,0:36:99:0,105,1880	1/1:0,13:13:33.11:505,33,0	1/1:2,16:18:44.91:686,45,0	1/1:0,29:29:66.22:1001,66,0	1/1:0,24:24:60.20:918,60,0	0/0:29,0:29:87.30:0,87,1605	0/0:24,0:24:72.23:0,72,1297	0/0:20,0:20:60.21:0,60,1118
chr10	103130321	.	C	CAGT	27312.27	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-16.705;DP=735;FS=0.956;HRun=0;HaplotypeScore=101.9938;InbreedingCoeff=0.9993;MQ=90.20;MQ0=0;MQRankSum=-8.533;QD=54.73;ReadPosRankSum=3.410;VQSLOD=7.0044;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,44:50:99:2541,108,0	1/1:2,7:10:21.07:496,21,0	0/0:31,0:31:87.25:0,87,1460	0/0:33,0:33:93.21:0,93,1580	0/0:30,0:30:87.30:0,87,1527	1/1:0,19:19:45.15:1064,45,0	1/1:4,23:28:72.25:1681,72,0	1/1:8,24:35:99:2081,99,0	1/1:1,26:28:72.25:1668,72,0	0/0:27,0:27:81.27:0,81,1399	0/0:21,0:21:57.20:0,57,1000	0/0:26,0:26:72.22:0,72,1214	1/1:2,22:25:66.23:1552,66,0	1/1:1,23:24:57.20:1346,57,0	1/1:5,27:32:78.27:1841,78,0	0/0:30,0:30:87.30:0,87,1535	1/1:0,23:23:60.21:1417,60,0	1/1:3,25:28:72.25:1701,72,0	1/1:2,15:17:48.16:1131,48,0	1/1:3,19:23:36.12:850,36,0	1/1:0,33:33:84.29:1987,84,0	1/1:3,21:24:45.15:1064,45,0	1/1:1,23:26:39.13:922,39,0	1/1:1,18:20:42.14:993,42,0	1/1:2,18:22:51.18:1206,51,0	0/0:18,0:18:54.17:0,54,920	1/1:5,27:32:75.26:1773,75,0	0/0:20,0:20:60.17:0,60,1009
chr10	103132363	.	CTGTG	C	1280.95	PASS	AB=0.758;AC=25;AF=0.500;AN=50;BaseQRankSum=2.802;DP=481;FS=2.844;HRun=0;HaplotypeScore=83.6018;InbreedingCoeff=0.5282;MQ=67.50;MQ0=9;MQRankSum=0.869;QD=5.67;ReadPosRankSum=0.624;VQSLOD=2.0456;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,1:27:5.40:57,5,0	1/1:3,2:5:2.91:46,3,0	./.	./.	0/0:14,0:14:24.08:0,24,480	1/1:10,5:15:12.04:187,12,0	1/1:13,5:18:14.97:205,15,0	0/0:25,0:25:3.01:0,3,55	1/1:9,3:12:9.03:140,9,0	0/0:20,0:20:22.31:0,22,449	0/0:14,0:20:24.08:0,24,458	0/0:13,0:13:18.06:0,18,415	1/1:7,1:9:6.01:75,6,0	1/1:5,4:9:6.02:94,6,0	0/0:12,0:13:2.74:0,3,12	0/1:13,2:15:37.79:38,0,100	1/1:26,0:26:3.01:40,3,0	0/1:13,6:19:22.88:156,0,23	0/0:15,0:16:8.35:0,8,65	0/0:17,0:17:5.75:0,6,55	0/0:28,0:27:6.01:0,6,98	./.	1/1:16,3:19:3.01:47,3,0	1/1:16,5:20:11.67:181,12,0	1/1:9,8:17:12.04:187,12,0	0/0:21,0:21:9.03:0,9,186	0/1:5,1:12:0.66:1,0,51	0/0:8,0:8:12.04:0,12,283
chr10	103133055	.	C	CA	1345.34	PASS	AB=0.934;AC=30;AF=0.556;AN=54;BaseQRankSum=9.693;DP=430;FS=1.820;HRun=3;HaplotypeScore=70.0612;InbreedingCoeff=0.5248;MQ=44.42;MQ0=6;MQRankSum=-4.131;QD=4.72;ReadPosRankSum=-2.798;VQSLOD=-0.5864;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:22:15.27:76,15,0	./.	0/0:10,0:8:24.07:0,24,287	0/0:20,0:12:26.67:0,27,297	0/0:20,0:20:48.01:0,48,553	1/1:15,0:8:6.95:59,7,0	0/1:13,0:9:2.80:43,0,3	1/1:17,4:15:1.90:146,2,0	1/1:6,0:3:0.77:2,1,0	0/0:14,0:14:42.13:0,42,504	0/0:10,0:10:30.08:0,30,349	0/0:12,0:12:36.11:0,36,432	1/1:20,0:17:18.87:137,19,0	1/1:11,0:10:5.29:22,5,0	1/1:9,0:8:5.87:21,6,0	0/0:11,0:11:33.10:0,33,396	0/1:21,1:22:9.71:26,0,10	1/1:21,1:18:5.80:44,6,0	1/1:11,16:24:4.37:306,4,0	1/1:11,5:14:18.89:197,19,0	0/1:6,7:13:27.81:116,0,28	0/1:6,0:5:0:0,0,0	1/1:15,0:12:6.35:24,6,0	0/1:11,0:11:0.86:54,0,1	0/1:11,0:6:9.41:17,0,9	0/0:21,0:21:63.19:0,63,756	1/1:2,14:17:20.95:237,21,0	0/0:22,0:21:63.19:0,63,754
chr10	103133059	.	C	CAAACAAACAAACAAAA	872.10	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=6.581;DP=419;FS=10.364;HRun=0;HaplotypeScore=171.4720;InbreedingCoeff=-0.0831;MQ=41.77;MQ0=8;MQRankSum=-8.590;QD=3.95;ReadPosRankSum=-2.847;VQSLOD=1.5172;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:20:37.93:58,0,38	1/1:6,0:5:2.97:20,3,0	0/0:11,0:8:20.99:0,21,354	0/0:17,0:10:26.83:0,27,458	0/0:18,0:18:51.01:0,51,1732	0/1:15,0:8:27.43:27,0,41	0/1:13,0:9:0.12:0,0,5	0/0:16,0:10:20.52:0,21,265	0/1:6,0:3:6.61:7,0,24	0/0:15,0:15:42.11:0,42,1492	0/0:10,0:10:30.06:0,30,986	0/0:14,0:14:42.07:0,42,1125	0/1:19,0:16:21.92:122,0,22	0/1:12,0:11:17.65:42,0,18	0/0:9,0:8:2.06:0,2,143	0/0:12,0:12:33.09:0,33,1122	1/1:2,11:22:9.02:453,9,0	0/1:23,0:18:14.12:14,0,27	0/1:27,0:24:64.53:65,0,623	0/1:15,0:12:23.27:23,0,374	0/0:13,0:13:13:0,13,548	0/0:5,0:4:8.98:0,9,80	0/1:12,0:9:29.19:29,0,93	0/1:12,0:12:44.84:121,0,45	0/1:12,0:7:48.13:48,0,65	0/0:21,0:21:63.20:0,63,2358	0/0:15,0:15:22.77:0,23,403	0/0:22,0:21:54.43:0,54,1774
chr10	103133961	.	A	AGAG	2072.66	PASS	AB=0.552;AC=37;AF=0.661;AN=56;BaseQRankSum=5.126;DP=431;FS=7.085;HRun=0;HaplotypeScore=92.5774;InbreedingCoeff=0.8136;MQ=77.12;MQ0=0;MQRankSum=-2.004;QD=6.58;ReadPosRankSum=2.637;VQSLOD=1.9118;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:41.44:157,41,0	1/1:12,0:12:25.94:100,26,0	0/0:17,0:17:33.98:0,34,440	0/0:13,0:14:15.23:0,15,329	0/0:3,0:3:8.98:0,9,80	1/1:8,0:8:18.17:70,18,0	1/1:28,0:28:44.73:224,45,0	0/1:3,9:16:3.59:128,0,4	1/1:16,0:16:30.40:114,30,0	0/0:15,0:15:20.95:0,21,279	0/0:10,0:11:17.99:0,18,247	0/0:13,0:13:32.98:0,33,432	1/1:17,0:17:37.79:146,38,0	1/1:20,0:20:31.57:150,32,0	1/1:8,0:8:2.87:24,3,0	0/0:19,0:20:7.74:0,8,494	1/1:6,4:19:3.85:22,4,0	1/1:17,0:17:28.18:106,28,0	1/1:6,9:16:31.94:361,32,0	1/1:4,0:4:6:53,6,0	1/1:13,1:23:14.94:120,15,0	1/1:13,0:14:20.81:80,21,0	1/1:8,0:8:7.79:30,8,0	1/1:32,0:32:62.93:256,63,0	1/1:14,0:14:23.43:90,23,0	0/0:11,0:11:27.06:0,27,365	1/1:2,1:16:3.01:49,3,0	0/0:12,0:12:24.03:0,24,391
chr10	103133962	.	G	GA	6528.38	PASS	AB=0.986;AC=32;AF=0.571;AN=56;BaseQRankSum=-8.856;DP=410;FS=2.415;HRun=1;HaplotypeScore=57.0135;InbreedingCoeff=0.6458;MQ=76.83;MQ0=0;MQRankSum=-2.210;QD=22.06;ReadPosRankSum=4.686;VQSLOD=5.1140;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:48.15:668,48,0	1/1:0,11:11:30.10:417,30,0	0/0:16,0:16:11.54:0,12,365	0/0:14,0:14:29.44:0,29,295	0/0:3,0:3:8.84:0,9,68	1/1:0,10:10:21.07:293,21,0	1/1:1,25:26:62.20:859,62,0	0/1:16,0:16:57.67:67,0,58	1/1:1,14:15:36.12:497,36,0	0/0:16,0:16:20.96:0,21,236	0/0:12,0:12:20.65:0,21,227	0/0:13,0:13:36.01:0,36,402	1/1:0,16:16:45.15:616,45,0	1/1:1,18:19:36.11:500,36,0	0/0:4,0:4:3.44:0,3,21	0/1:16,1:17:23.86:24,0,381	0/0:14,0:14:2.75:0,3,23	1/1:0,15:15:33.11:457,33,0	0/1:13,0:13:0.60:114,0,1	0/1:5,0:5:17.11:25,0,17	1/1:21,1:22:14.71:119,15,0	1/1:1,14:15:23.81:335,24,0	1/1:1,9:10:12.04:159,12,0	1/1:2,30:32:72.20:982,72,0	1/1:0,13:13:27.09:376,27,0	0/0:11,0:11:27.06:0,27,312	1/1:13,0:13:2.96:20,3,0	0/0:11,0:11:30.04:0,30,368
chr10	103135217	.	C	CA	4278.04	PASS	AB=0.722;AC=19;AF=0.339;AN=56;BaseQRankSum=-7.643;DP=1099;FS=75.501;HRun=1;HaplotypeScore=315.4320;InbreedingCoeff=-0.5089;MQ=55.25;MQ0=0;MQRankSum=-6.751;QD=5.20;ReadPosRankSum=-4.342;VQSLOD=0.8929;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:43,19:61:99:125,0,957	0/1:12,9:21:99:119,0,375	0/0:23,0:22:56.95:0,57,716	0/0:37,0:35:93.10:0,93,1109	0/0:28,0:28:81.09:0,81,995	0/1:16,16:32:99:129,0,483	0/1:23,20:43:99:181,0,521	0/1:28,14:42:99:486,0,917	0/1:41,19:59:8.90:9,0,1178	0/0:46,0:46:99:0,135,1737	0/0:18,0:18:51.15:0,51,647	0/0:33,0:33:96.06:0,96,1190	0/1:35,20:55:99:123,0,1121	0/1:31,20:51:59.39:59,0,984	0/1:40,39:79:99:572,0,954	0/0:32,0:32:96.30:0,96,1232	0/1:27,11:38:99:140,0,701	0/1:22,5:27:99:214,0,481	0/1:19,10:29:99:409,0,577	0/1:16,27:43:99:268,0,292	0/1:32,7:39:99:135,0,369	0/1:27,19:46:99:254,0,749	0/1:22,21:43:99:200,0,563	0/1:33,14:47:99:165,0,448	0/1:12,21:33:99:301,0,357	0/0:39,0:39:99:0,117,1520	0/1:18,13:30:99:387,0,466	0/0:21,0:21:63.20:0,63,818
chr10	103135757	.	T	TA	758.85	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.471;DP=664;FS=1.920;HRun=1;HaplotypeScore=81.6020;InbreedingCoeff=0.9974;MQ=93.78;MQ0=1;MQRankSum=-3.480;QD=31.62;ReadPosRankSum=0.285;VQSLOD=3.3343;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1453	0/0:10,0:10:30.08:0,30,375	0/0:27,0:27:79.93:0,80,908	0/0:31,0:31:78.16:0,78,886	0/0:21,0:21:57.18:0,57,728	0/0:20,0:20:54.17:0,54,692	0/0:26,0:26:78.23:0,78,984	0/0:31,0:31:84.26:0,84,1076	0/0:24,0:24:72.20:0,72,916	0/0:24,0:24:72.23:0,72,923	0/0:18,0:18:54.16:0,54,687	0/0:14,0:14:42.12:0,42,531	0/0:26,0:26:78.22:0,78,982	0/0:18,0:18:54.18:0,54,700	1/1:1,23:24:57.19:854,57,0	0/0:25,0:25:75.24:0,75,973	0/0:26,0:26:72.21:0,72,918	0/0:33,0:32:96.31:0,96,1242	0/0:20,0:20:60.18:0,60,765	0/0:39,0:39:99:0,114,1462	0/0:29,0:29:84.26:0,84,1071	0/0:24,0:24:72.21:0,72,918	0/0:16,0:16:45.15:0,45,584	0/0:21,0:21:63.19:0,63,803	0/0:18,0:18:51.17:0,51,660	0/0:21,0:21:63.19:0,63,792	0/0:29,0:29:84.24:0,84,1060	0/0:10,0:10:24.08:0,24,311
chr10	103136432	.	CA	C	606.33	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.661;DP=591;FS=0.919;HRun=2;HaplotypeScore=57.7340;InbreedingCoeff=0.9384;MQ=78.96;MQ0=0;MQRankSum=-1.892;QD=31.91;ReadPosRankSum=1.754;VQSLOD=3.3890;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1483	0/0:8,0:8:21.07:0,21,315	0/0:13,0:12:36.07:0,36,498	0/0:15,0:15:39.12:0,39,536	0/0:17,0:17:48.16:0,48,714	0/0:17,0:17:45.14:0,45,650	0/0:20,0:20:60.20:0,60,894	0/0:17,0:17:51.17:0,51,743	0/0:15,0:15:42.14:0,42,629	0/0:26,0:26:72.21:0,72,1041	0/0:16,0:16:48.12:0,48,690	0/0:34,0:34:99:0,102,1502	0/0:25,0:25:75.24:0,75,1105	0/0:25,0:25:72.24:0,72,1078	1/1:0,19:19:54.18:701,54,0	0/0:14,0:14:42.14:0,42,629	0/0:42,0:42:99:0,126,1862	0/0:27,0:27:81.27:0,81,1208	0/0:20,0:20:57.19:0,57,850	0/0:10,0:10:24.08:0,24,359	0/0:62,0:62:99:0,184,2728	0/0:14,0:14:39.13:0,39,584	0/0:11,0:11:33.11:0,33,490	0/0:33,0:33:96.28:0,96,1377	0/0:21,0:21:63.21:0,63,933	0/0:25,0:25:72.24:0,72,1079	0/0:9,0:8:27.09:0,27,404	0/0:3,0:3:9.03:0,9,130
chr10	103139275	.	A	AGAGGGGG	7820.89	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-0.832;DP=515;FS=11.130;HRun=0;HaplotypeScore=118.7737;InbreedingCoeff=0.9832;MQ=74.48;MQ0=0;MQRankSum=-12.329;QD=59.25;ReadPosRankSum=-3.206;VQSLOD=3.2690;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.11:0,51,1030	0/0:3,0:3:9.03:0,9,224	0/0:12,0:12:24.07:0,24,495	0/0:10,0:10:20.93:0,21,342	0/0:10,0:10:27.09:0,27,641	0/0:14,0:14:36.11:0,36,846	0/0:23,0:23:48.11:0,48,938	1/1:14,4:21:45.13:1446,45,0	0/0:23,0:23:69.18:0,69,1514	0/0:21,0:21:57.19:0,57,1314	0/0:11,0:11:33.11:0,33,679	0/0:17,0:17:45.14:0,45,1041	0/0:19,0:19:57.18:0,57,1362	0/0:28,0:28:84.29:0,84,2064	1/1:8,9:21:36.12:1242,36,0	0/0:22,0:22:60.19:0,60,1416	0/0:28,0:28:81.26:0,81,1904	0/0:19,0:19:51.17:0,51,1249	1/1:5,5:16:44.98:1451,45,0	1/1:5,3:8:15.05:518,15,0	1/1:15,20:45:38.25:1204,38,0	0/0:14,0:14:33.10:0,33,770	0/0:15,0:15:42.12:0,42,987	0/0:29,0:29:75.24:0,75,1782	0/0:10,0:10:27.09:0,27,646	0/0:23,0:23:66.22:0,66,1535	1/1:4,14:21:54.18:1958,54,0	0/0:14,0:14:39.08:0,39,858
chr10	103140189	.	C	CCA	5085.25	PASS	AB=0.774;AC=31;AF=0.596;AN=52;BaseQRankSum=-4.448;DP=717;FS=0.504;HRun=0;HaplotypeScore=116.8986;InbreedingCoeff=0.1183;MQ=67.31;MQ0=16;MQRankSum=-2.234;QD=9.61;ReadPosRankSum=0.014;VQSLOD=4.6030;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,9:39:99:454,0,136	0/1:5,4:9:39.09:161,0,39	./.	0/0:58,0:27:2.80:0,3,31	0/0:16,0:17:32.91:0,33,341	0/1:19,1:19:76.43:148,0,76	0/1:28,12:41:59.53:426,0,60	1/1:19,0:21:16.86:120,17,0	0/1:14,12:27:48.57:332,0,49	0/1:26,2:28:12.82:13,0,263	./.	0/0:15,0:17:26.74:0,27,263	1/1:12,12:24:21.07:315,21,0	0/1:14,11:26:36.28:491,0,36	1/1:13,0:26:29.03:242,29,0	0/0:21,1:24:2.15:0,2,419	1/1:25,20:47:27.80:913,28,0	0/1:15,11:29:63.98:390,0,64	1/1:15,0:16:15.32:109,15,0	1/1:10,0:11:2.80:13,3,0	1/1:48,0:56:17.12:173,17,0	1/1:11,6:17:15.05:228,15,0	1/1:9,6:15:6.02:91,6,0	0/1:26,13:40:67.85:318,0,68	1/1:9,3:12:3.01:46,3,0	0/0:13,0:16:20.39:0,20,188	1/1:9,0:15:12:104,12,0	0/0:2,0:2:3.01:0,3,34
chr10	103140416	.	A	AT	2148.79	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=-2.295;DP=535;FS=5.044;HRun=9;HaplotypeScore=71.6255;InbreedingCoeff=0.8338;MQ=67.88;MQ0=4;MQRankSum=0.089;QD=15.57;ReadPosRankSum=-2.305;VQSLOD=3.4599;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:83.95:0,84,728	0/0:7,0:7:17.99:0,18,156	0/1:17,0:11:6.86:7,0,137	0/0:16,0:12:7.49:0,7,124	0/0:22,0:22:53.95:0,54,462	0/0:15,0:15:35.98:0,36,312	0/0:18,0:18:47.95:0,48,413	1/1:10,17:26:51.30:502,51,0	0/0:15,0:15:35.98:0,36,312	0/0:18,0:18:41.95:0,42,358	0/0:16,0:15:35.46:0,35,292	0/0:15,0:15:38.98:0,39,338	0/0:10,0:10:23.99:0,24,208	0/1:15,0:14:0.16:0,0,219	0/0:17,0:17:44.99:0,45,390	0/0:8,0:8:20.99:0,21,182	0/0:43,0:43:99:0,114,984	0/0:26,0:26:71.97:0,72,624	1/1:6,9:15:30.06:320,30,0	1/1:1,16:17:44.97:463,45,0	1/1:4,18:22:42.11:465,42,0	0/0:19,0:19:41.95:0,42,359	0/0:24,0:24:62.93:0,63,536	0/0:18,0:18:38.96:0,39,338	0/0:14,0:14:38.83:0,39,335	0/0:28,0:28:68.31:0,68,574	1/1:2,22:25:48.67:568,49,0	0/0:13,0:14:35.03:0,35,292
chr10	103140584	.	C	CAGGAACT	33168.74	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-6.792;DP=528;FS=0.762;HRun=0;HaplotypeScore=109.4400;InbreedingCoeff=0.9991;MQ=85.05;MQ0=0;MQRankSum=-16.467;QD=90.38;ReadPosRankSum=-0.039;VQSLOD=5.6000;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,20:31:71.96:2392,72,0	1/1:6,6:12:36.12:1129,36,0	0/0:23,0:23:44.31:0,44,1075	0/0:27,0:27:59.50:0,59,1309	0/0:17,0:17:45.15:0,45,1152	1/1:5,23:30:75.19:2751,75,0	1/1:2,14:19:48.16:1929,48,0	1/1:8,8:17:51.15:1721,51,0	1/1:1,13:14:42.14:1688,42,0	0/0:19,0:19:57.19:0,57,1428	0/0:15,0:15:45.14:0,45,1113	0/0:17,0:17:48.15:0,48,1211	1/1:2,11:14:36.12:1399,36,0	1/1:4,11:17:42.14:1540,42,0	1/1:4,11:16:42.14:1598,42,0	0/0:12,0:12:36.12:0,36,943	1/1:11,12:25:56.94:1887,57,0	1/1:3,8:11:27.09:1086,27,0	1/1:10,5:17:51.17:1599,51,0	1/1:7,11:19:48.16:1600,48,0	1/1:10,6:16:36.12:1219,36,0	1/1:4,8:13:36.05:1114,36,0	1/1:4,18:23:60.21:2262,60,0	1/1:9,11:24:44.57:1765,45,0	1/1:3,13:17:45.15:1727,45,0	0/0:24,0:24:63.22:0,63,1635	1/1:4,22:29:72.18:2764,72,0	0/0:7,0:7:21.07:0,21,486
chr10	103143187	.	A	AAG	3828.22	PASS	AB=0.979;AC=27;AF=0.482;AN=56;BaseQRankSum=11.395;DP=557;FS=0.345;HRun=0;HaplotypeScore=117.9880;InbreedingCoeff=0.1718;MQ=56.48;MQ0=7;MQRankSum=-11.700;QD=9.97;ReadPosRankSum=6.045;VQSLOD=3.2019;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,1:28:35.09:237,0,35	1/1:13,0:13:22.87:188,23,0	0/0:27,0:11:3.89:0,4,49	0/0:15,0:8:7.15:0,7,46	0/0:22,0:22:56.83:0,57,607	1/1:17,0:17:21.31:185,21,0	0/1:20,1:21:10.31:229,0,10	1/1:15,1:13:9.20:145,9,0	0/1:18,0:16:64.86:128,0,65	0/0:28,0:28:62.94:0,63,680	0/0:15,0:15:36.21:0,36,316	0/0:16,0:16:45.01:0,45,441	0/1:11,1:11:21.10:100,0,21	1/1:15,0:16:3.74:185,4,0	0/1:20,0:20:27.65:179,0,28	0/0:19,0:19:41.95:0,42,440	0/1:21,1:22:25.35:170,0,25	0/1:28,1:29:64.45:319,0,64	0/1:24,0:21:14.04:254,0,14	1/1:21,0:20:13.75:257,14,0	0/1:8,0:8:6.22:75,0,6	1/1:18,0:19:32:245,32,0	1/1:23,0:22:22.39:244,22,0	0/1:22,0:22:27.95:110,0,28	0/1:34,0:33:32.67:310,0,33	0/0:16,0:16:44.61:0,45,481	1/1:20,0:20:25.76:269,26,0	0/0:15,0:15:44.40:0,44,431
chr10	103143203	.	G	GA	333.02	PASS	AB=0.600;AC=1;AF=0.018;AN=56;BaseQRankSum=0.574;DP=548;FS=5.841;HRun=3;HaplotypeScore=114.1964;InbreedingCoeff=-0.0191;MQ=54.78;MQ0=6;MQRankSum=-0.244;QD=18.50;ReadPosRankSum=-0.059;VQSLOD=2.8291;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:81.12:0,81,913	0/0:11,0:11:33.08:0,33,366	0/0:25,0:10:25.61:0,26,270	0/0:15,0:9:14.37:0,14,115	0/0:23,0:23:69.21:0,69,820	0/0:16,0:16:45.13:0,45,527	0/0:20,0:21:37.24:0,37,606	0/0:17,0:14:39.11:0,39,445	0/0:11,0:10:30.07:0,30,333	0/0:27,0:27:78.24:0,78,928	0/0:17,0:17:45.14:0,45,539	0/0:15,0:15:39.03:0,39,466	0/0:11,0:10:26.98:0,27,276	0/0:17,0:17:51.15:0,51,598	0/1:6,12:18:99:407,0,137	0/0:19,0:19:51.16:0,51,611	0/0:23,0:23:60.15:0,60,679	0/0:28,0:28:52.72:0,53,858	0/0:26,0:24:69.19:0,69,791	0/0:23,0:22:62.75:0,63,684	0/0:9,0:9:21.06:0,21,250	0/0:15,0:15:39.07:0,39,434	0/0:23,0:22:58.18:0,58,622	0/0:24,0:24:51.14:0,51,583	0/0:27,0:26:72.21:0,72,837	0/0:21,0:21:63.19:0,63,754	0/0:21,0:21:57.09:0,57,614	0/0:13,0:13:30.92:0,31,323
chr10	103143207	.	GA	G	706.84	PASS	AB=0.823;AC=16;AF=0.286;AN=56;BaseQRankSum=9.355;DP=552;FS=14.799;HRun=4;HaplotypeScore=108.8794;InbreedingCoeff=-0.3958;MQ=55.67;MQ0=6;MQRankSum=-7.536;QD=2.17;ReadPosRankSum=2.383;VQSLOD=-0.6580;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,5:31:24.74:25,0,840	0/1:7,4:11:85.94:86,0,259	0/0:24,0:10:26.42:0,26,364	0/1:16,0:10:6.88:7,0,168	0/0:23,0:23:63.18:0,63,868	0/0:16,1:17:4.85:0,5,575	0/1:15,5:20:84.15:84,0,508	0/1:14,4:16:47.89:48,0,435	0/1:8,4:11:74.66:75,0,258	0/0:27,0:27:75.24:0,75,1040	0/0:17,0:17:45.12:0,45,604	0/0:15,0:15:40.95:0,41,547	0/1:8,4:11:82.48:82,0,179	0/0:17,1:18:17.52:0,18,628	0/1:14,4:18:43.36:43,0,342	0/0:18,0:18:48.16:0,48,669	0/1:20,4:24:54.38:54,0,627	0/1:25,6:31:97.88:98,0,821	0/0:26,1:25:6.41:0,6,863	0/1:18,6:23:43.71:44,0,623	0/0:8,0:8:24.08:0,24,329	0/1:11,3:14:27.51:28,0,377	0/1:16,6:21:53.30:53,0,487	0/1:18,4:22:1.81:2,0,525	0/1:23,5:27:22.54:23,0,749	0/0:22,0:22:66.22:0,66,914	0/1:17,4:21:99:110,0,485	0/0:11,0:11:30.99:0,31,417
chr10	103144352	.	G	GTA	517.26	PASS	AB=0.975;AC=13;AF=0.232;AN=56;BaseQRankSum=9.910;DP=635;FS=19.486;HRun=0;HaplotypeScore=129.4886;InbreedingCoeff=-0.3015;MQ=52.12;MQ0=22;MQRankSum=-0.324;QD=1.93;ReadPosRankSum=-3.505;VQSLOD=0.2881;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:52.56:53,0,105	0/1:13,0:13:28.74:29,0,101	0/0:33,0:14:35.13:0,35,319	0/0:35,0:15:32.09:0,32,330	0/0:15,0:15:39.02:0,39,432	0/1:13,7:19:41.30:41,0,74	0/1:31,0:29:18.92:19,0,271	0/0:31,0:31:18.58:0,19,393	0/1:20,0:20:16.13:16,0,89	0/0:35,0:35:99:0,102,1053	0/0:12,0:12:23.97:0,24,215	0/0:24,0:24:59.93:0,60,568	0/1:13,0:13:91.33:91,0,104	0/1:23,0:23:78.08:78,0,149	0/0:18,0:17:5.65:0,6,115	0/0:19,0:19:30.46:0,30,413	0/1:21,0:21:41.20:41,0,108	0/1:19,0:19:53.59:54,0,197	0/0:25,0:23:23.45:0,23,310	0/0:9,0:9:10.98:0,11,88	0/0:63,0:60:49.29:0,49,549	0/1:19,0:18:48.90:101,0,49	0/1:12,0:13:11.88:53,0,12	0/1:29,0:28:66.93:67,0,116	0/1:21,0:20:28.16:28,0,105	0/0:31,0:31:87.16:0,87,727	0/0:8,0:7:15.01:0,15,92	0/0:9,0:9:26.97:0,27,259
chr10	103145043	.	GTTCAACAGGGAGAAACAAGA	G	30254.18	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=16.687;DP=415;FS=1.696;HRun=0;HaplotypeScore=251.5161;InbreedingCoeff=0.9717;MQ=93.95;MQ0=0;MQRankSum=-15.521;QD=136.28;ReadPosRankSum=5.888;VQSLOD=4.3267;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:39.13:2153,39,0	1/1:1,14:15:39.13:2195,39,0	0/0:23,0:24:72.25:0,72,4569	0/0:22,0:22:63.22:0,63,4572	0/0:24,0:24:72.25:0,72,6687	1/1:0,16:16:45.15:2620,45,0	1/1:0,15:15:39.13:2270,39,0	1/1:0,8:8:24.07:1020,24,0	1/1:0,17:17:39.13:2202,39,0	0/0:26,0:26:78.23:0,78,6582	0/0:24,0:24:72.25:0,72,6674	0/0:24,0:24:72.25:0,72,6289	1/1:0,13:13:36.12:2095,36,0	1/1:0,14:15:42.14:2444,42,0	1/1:0,8:8:20.91:1222,21,0	0/0:17,0:17:51.18:0,51,4882	1/1:0,13:13:33.11:1921,33,0	1/1:0,8:8:21.07:1020,21,0	1/1:0,9:9:27.06:1150,27,0	1/1:0,8:8:12.04:698,12,0	1/1:0,11:11:9:523,9,0	1/1:0,6:6:18.06:1048,18,0	1/1:0,9:9:18.06:1047,18,0	1/1:0,8:8:8.58:419,9,0	1/1:0,15:15:39.13:2111,39,0	0/0:22,0:22:66.23:0,66,6083	1/1:0,12:12:36.12:2095,36,0	0/0:10,0:10:27.09:0,27,2654
chr10	103145773	.	TG	T	10763.65	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=5.113;DP=618;FS=0.000;HRun=8;HaplotypeScore=69.6152;InbreedingCoeff=0.9972;MQ=76.32;MQ0=0;MQRankSum=-1.745;QD=24.30;ReadPosRankSum=4.491;VQSLOD=5.3472;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,41:46:99:1148,120,0	1/1:0,10:11:29.08:267,29,0	0/0:14,0:14:32.76:0,33,341	0/0:19,0:19:47.70:0,48,505	0/0:24,0:24:56.81:0,57,654	1/1:0,19:19:48.07:462,48,0	1/1:0,18:18:42.07:406,42,0	1/1:8,19:27:54.05:516,54,0	1/1:0,23:23:63.10:608,63,0	0/0:25,0:24:63.17:0,63,737	0/0:22,0:22:57.16:0,57,670	0/0:22,0:22:54.16:0,54,642	1/1:4,23:27:60.09:579,60,0	1/1:1,21:22:54.09:521,54,0	1/1:0,15:15:42.07:405,42,0	0/0:17,0:17:39.10:0,39,458	1/1:2,28:30:84.13:811,84,0	1/1:1,19:20:57.09:550,57,0	1/1:0,15:15:45.07:434,45,0	1/1:1,18:19:45.07:434,45,0	1/1:1,29:30:84.13:811,84,0	1/1:2,28:29:72.12:695,72,0	1/1:2,11:13:27.04:261,27,0	1/1:6,26:32:72.11:695,72,0	1/1:0,18:18:54.09:521,54,0	0/0:27,0:27:75.23:0,75,905	1/1:2,26:28:66.10:637,66,0	0/0:5,0:5:15.05:0,15,181
chr10	103145926	.	TCC	T	3992.89	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=0.333;DP=550;FS=0.000;HRun=3;HaplotypeScore=97.2499;InbreedingCoeff=0.6969;MQ=60.64;MQ0=46;MQRankSum=-1.650;QD=9.64;ReadPosRankSum=-2.320;VQSLOD=-0.4839;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:25:44.72:343,45,0	1/1:8,0:7:10.23:78,10,0	0/0:23,0:10:1.70:0,2,24	0/1:40,0:18:26.60:27,0,54	0/0:22,0:21:28.08:0,28,319	1/1:23,0:20:32.80:275,33,0	1/1:17,0:13:13.77:170,14,0	1/1:12,11:17:44.84:357,45,0	1/1:19,0:18:8.44:148,8,0	0/0:31,0:30:7.60:0,8,454	0/0:13,0:10:13.61:0,14,134	0/0:15,0:14:23.73:0,24,271	1/1:24,0:20:7.32:145,7,0	0/1:13,0:12:2.41:70,0,2	1/1:9,0:8:20.89:161,21,0	0/1:16,0:15:5.06:5,0,373	1/1:23,1:24:39.22:274,39,0	1/1:19,0:17:31.76:259,32,0	1/1:16,0:14:39.84:304,40,0	1/1:12,0:12:24.43:197,24,0	1/1:21,0:19:14.87:112,15,0	1/1:10,0:8:11.94:91,12,0	1/1:15,0:15:29.89:236,30,0	1/1:33,1:32:17.95:153,18,0	1/1:13,0:11:17.35:119,17,0	0/0:16,0:14:20.58:0,21,302	1/1:28,1:27:59.18:470,59,0	0/0:16,0:14:18.46:0,18,254
chr10	103145969	.	CTG	C	518.31	PASS	AB=0.972;AC=22;AF=0.440;AN=50;BaseQRankSum=4.741;DP=478;FS=47.432;HRun=0;HaplotypeScore=89.9042;InbreedingCoeff=-0.0225;MQ=37.18;MQ0=35;MQRankSum=-0.447;QD=1.73;ReadPosRankSum=-1.095;VQSLOD=-0.1579;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:20:2.68:0,3,11	0/0:7,0:7:0.96:0,1,6	./.	./.	0/1:19,0:18:53.63:54,0,181	0/1:18,0:13:7.77:32,0,8	0/0:22,0:15:5.53:0,6,31	0/0:28,0:26:51.71:0,52,378	0/1:17,0:17:9.56:11,0,10	0/1:27,1:27:99:157,0,188	1/1:15,0:14:2.71:13,3,0	0/0:18,0:16:26.44:0,26,280	0/1:23,0:22:4.39:4,0,48	0/0:16,0:16:1.27:0,1,60	0/0:16,0:16:5.98:0,6,47	0/0:14,0:13:13.21:0,13,241	0/1:24,0:23:5.48:31,0,5	0/1:17,0:15:32.24:104,0,32	0/1:22,0:20:54.66:55,0,198	1/1:6,0:6:4.95:26,5,0	./.	1/1:15,0:12:5.91:38,6,0	1/1:11,0:11:2.99:23,3,0	1/1:36,0:32:2.96:21,3,0	1/1:16,0:16:2.69:8,3,0	0/1:9,3:10:58.21:58,0,143	0/1:19,1:20:29.34:29,0,115	0/0:15,0:11:25.88:0,26,413
chr10	103145975	.	CTCTCTG	C	713.23	PASS	AB=1.000;AC=12;AF=0.240;AN=50;BaseQRankSum=2.962;DP=495;FS=19.367;HRun=0;HaplotypeScore=112.1513;InbreedingCoeff=0.1820;MQ=36.93;MQ0=32;MQRankSum=-0.765;QD=4.17;ReadPosRankSum=-0.824;VQSLOD=0.8369;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:21:2.50:0,2,9	0/0:7,0:7:2.84:0,3,14	./.	./.	0/0:19,0:18:8.83:0,9,518	0/1:21,0:16:12.87:13,0,53	0/0:21,0:15:7.82:0,8,72	0/0:28,0:25:50.46:0,50,435	0/0:19,0:19:2.08:0,2,47	1/1:7,20:26:47.15:741,47,0	0/0:2,13:15:0:0,0,0	0/0:19,0:17:23.23:0,23,458	0/1:24,0:23:6.89:7,0,146	0/0:17,0:17:4.92:0,5,141	0/0:16,0:16:6.02:0,6,132	0/0:14,0:14:32.12:0,32,668	0/0:23,0:22:4.98:0,5,73	0/1:17,0:15:9.85:10,0,119	0/1:21,0:19:12.69:13,0,108	1/1:7,0:7:0.47:1,0,0	./.	1/1:18,0:15:5.58:32,6,0	0/1:14,0:13:0:0,0,0	0/0:36,0:32:2.98:0,3,21	0/0:16,0:16:1.25:0,1,3	0/0:14,0:11:26.43:0,26,534	0/1:22,0:22:23.79:24,0,75	0/0:15,0:11:21.07:0,21,542
chr10	103145979	.	CTG	C	362.42	PASS	AB=0.996;AC=18;AF=0.375;AN=48;BaseQRankSum=6.277;DP=489;FS=50.884;HRun=0;HaplotypeScore=99.6919;InbreedingCoeff=-0.1775;MQ=37.00;MQ0=28;MQRankSum=-1.470;QD=1.31;ReadPosRankSum=-2.135;VQSLOD=-0.4597;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:23:2.04:0,2,6	0/0:7,0:7:2.47:0,2,9	./.	./.	0/1:20,0:19:6.68:7,0,444	0/1:20,0:15:33.20:33,0,42	0/0:20,0:15:5.69:0,6,69	0/0:27,0:24:60.83:0,61,844	0/1:20,0:19:19.59:20,0,43	0/1:24,0:24:53.92:151,0,54	0/1:14,0:14:0.06:0,0,0	0/0:18,0:16:21.67:0,22,413	0/1:24,0:23:19.42:19,0,112	0/1:18,0:18:15.76:16,0,86	0/0:17,0:17:6.02:0,6,115	0/0:15,0:15:36.08:0,36,552	0/1:21,0:20:20.41:20,0,46	0/1:16,0:15:36.74:37,0,120	0/1:18,1:17:41.55:42,0,416	1/1:7,0:7:1.95:6,2,0	./.	1/1:19,0:17:5.87:45,6,0	./.	0/0:33,3:32:2.80:0,3,13	1/1:18,0:18:2.94:18,3,0	0/1:14,0:11:42.52:43,0,337	0/1:22,0:22:43.41:43,0,241	0/0:14,0:11:23.37:0,23,440
chr10	103145997	.	CTG	C	851.35	PASS	AB=0.991;AC=19;AF=0.413;AN=46;BaseQRankSum=6.221;DP=488;FS=1.409;HRun=0;HaplotypeScore=93.3531;InbreedingCoeff=0.3566;MQ=36.66;MQ0=27;MQRankSum=-4.865;QD=3.22;ReadPosRankSum=-2.505;VQSLOD=1.9380;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:24:1.82:5,2,0	0/0:7,0:7:2.50:0,2,9	./.	./.	0/0:24,0:21:32.54:0,33,522	0/0:19,0:15:2.17:0,2,17	0/1:33,0:29:18.54:19,0,117	1/1:23,5:25:53.04:419,53,0	0/1:21,1:20:0.99:1,0,12	0/1:25,0:25:50.29:50,0,217	1/1:17,0:16:2.85:21,3,0	0/0:18,0:15:22.48:0,22,353	0/0:18,1:18:8.33:0,8,82	0/0:19,0:19:5.93:0,6,63	0/0:17,0:17:6.02:0,6,116	0/0:13,0:13:27.08:0,27,474	0/1:22,0:21:5.27:5,0,10	0/0:12,0:12:14.84:0,15,134	1/1:8,3:9:22.94:164,23,0	1/1:5,5:10:1.69:5,2,0	./.	0/0:19,0:18:0:0,0,0	./.	1/1:32,0:29:3.41:19,3,0	./.	0/1:20,0:16:16.43:16,0,389	1/1:8,10:18:30.92:274,31,0	0/0:10,0:8:20.82:0,21,213
chr10	103146003	.	CTCTCTCTCTG	C	516.28	PASS	AB=0.914;AC=13;AF=0.271;AN=48;BaseQRankSum=3.482;DP=490;FS=0.770;HRun=0;HaplotypeScore=118.9573;InbreedingCoeff=0.3608;MQ=37.51;MQ0=28;MQRankSum=-3.458;QD=3.23;ReadPosRankSum=1.033;VQSLOD=2.2935;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:26:2.37:8,2,0	1/1:6,0:6:2.74:12,3,0	./.	./.	0/0:24,0:21:33.58:0,34,1123	0/1:20,0:16:0:0,0,0	0/0:33,0:29:1.86:0,2,150	0/1:15,8:19:99:377,0,131	1/1:22,0:20:2.05:26,2,0	0/0:27,0:26:37.30:0,37,908	0/0:17,0:16:2.99:0,3,63	0/0:18,0:15:24.97:0,25,778	0/0:20,0:19:3.01:0,3,49	0/0:18,0:18:4.83:0,5,104	0/0:16,0:16:8.06:0,8,206	0/0:13,0:13:30.10:0,30,948	0/0:22,0:21:5.45:0,5,28	0/0:10,0:10:5.23:0,5,63	0/1:12,0:11:15.51:106,0,16	0/0:10,0:10:0.47:0,0,1	./.	0/0:21,0:21:5.21:0,5,59	./.	1/1:28,0:25:3.19:14,3,0	0/0:21,0:21:2.22:0,2,7	0/0:20,0:16:45.07:0,45,987	1/1:21,0:21:15.28:102,15,0	0/0:9,0:7:9.01:0,9,228
chr10	103146011	.	CTG	C	658.27	PASS	AB=0.943;AC=21;AF=0.420;AN=50;BaseQRankSum=4.726;DP=486;FS=2.451;HRun=0;HaplotypeScore=92.4651;InbreedingCoeff=0.3449;MQ=39.15;MQ0=26;MQRankSum=-3.408;QD=2.68;ReadPosRankSum=-1.005;VQSLOD=2.1341;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:27:2.96:19,3,0	1/1:6,0:6:2.22:7,2,0	./.	./.	0/0:26,0:22:26.68:0,27,500	1/1:19,0:17:0.47:1,0,0	0/1:33,0:30:50.48:86,0,50	1/1:17,5:17:34.62:284,35,0	1/1:21,1:20:1.25:3,1,0	0/0:28,0:27:18.87:0,19,496	0/0:17,0:16:5.88:0,6,43	0/0:17,0:15:20.62:0,21,272	0/0:20,0:19:2.47:0,2,37	0/1:20,0:20:27.75:32,0,28	0/0:18,0:18:4.24:0,4,85	0/0:14,0:14:29.97:0,30,406	0/1:26,0:25:9.20:9,0,13	0/0:9,0:9:5.94:0,6,44	1/1:10,3:11:11.46:175,11,0	0/1:6,4:10:0.13:0,0,0	./.	0/0:20,0:20:4.49:0,4,22	0/0:18,0:17:2.74:0,3,12	1/1:27,0:23:3.41:19,3,0	0/0:20,0:20:2.88:0,3,15	0/0:20,0:17:44.37:0,44,436	1/1:8,8:16:12.79:162,13,0	0/1:4,0:3:10.23:10,0,48
chr10	103146013	.	G	GTCTCTC	840.92	PASS	AB=0.861;AC=28;AF=0.583;AN=48;BaseQRankSum=1.839;DP=485;FS=2.630;HRun=0;HaplotypeScore=106.2207;InbreedingCoeff=0.3345;MQ=39.52;MQ0=26;MQRankSum=-1.976;QD=2.64;ReadPosRankSum=-2.026;VQSLOD=1.8290;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:27:3.01:32,3,0	1/1:0,6:7:3.48:36,3,0	./.	./.	0/0:27,0:23:26.05:0,26,692	0/1:8,0:19:0.01:0,0,0	1/1:32,0:30:23.13:253,23,0	1/1:18,0:13:5.11:148,5,0	1/1:24,0:22:2.63:16,3,0	0/0:22,0:21:50.88:0,51,778	0/0:17,0:16:6.03:0,6,60	0/0:18,0:16:23.87:0,24,434	1/1:5,14:19:6.42:91,6,0	1/1:6,12:19:2.53:74,3,0	0/0:19,0:19:8.45:0,8,58	0/0:12,0:12:27.09:0,27,532	0/1:7,16:24:31.35:48,0,31	1/1:9,0:9:3.01:91,3,0	0/1:13,0:11:43.82:49,0,44	1/1:9,0:9:2.96:19,3,0	./.	1/1:22,0:22:2.87:49,3,0	0/1:2,15:18:0.13:0,0,0	1/1:29,0:26:3.01:64,3,0	./.	0/0:18,0:15:39.03:0,39,590	0/1:17,0:17:11.57:12,0,36	0/1:4,0:3:9.96:10,0,119
chr10	103146017	.	C	CTCTCTCTG	1177.67	PASS	AB=0.855;AC=29;AF=0.558;AN=52;BaseQRankSum=1.993;DP=500;FS=5.821;HRun=0;HaplotypeScore=119.8436;InbreedingCoeff=0.4568;MQ=40.04;MQ0=27;MQRankSum=-2.473;QD=3.75;ReadPosRankSum=-1.656;VQSLOD=1.7923;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:3.01:32,3,0	1/1:8,0:8:6.46:58,6,0	./.	./.	0/0:21,0:23:41.26:0,41,829	0/0:23,0:20:2.97:0,3,21	1/1:34,0:32:12.35:405,12,0	1/1:20,0:13:5.11:148,5,0	1/1:5,17:23:3.01:53,3,0	0/0:22,0:21:53.84:0,54,798	0/0:18,0:18:5.56:0,6,98	0/0:18,0:16:26.99:0,27,554	1/1:20,0:19:6.42:92,6,0	1/1:19,0:19:8.73:143,9,0	0/0:8,0:20:8.05:0,8,57	0/0:9,0:12:30.08:0,30,630	1/1:24,0:23:7.60:73,8,0	1/1:0,9:10:3.01:135,3,0	0/1:13,0:12:49.58:50,0,50	1/1:4,0:10:2.96:19,3,0	1/1:6,0:8:0.47:1,0,0	0/1:5,16:22:10.56:11,0,19	0/0:19,0:18:0.47:0,0,1	1/1:30,1:27:4.35:110,4,0	1/1:22,0:21:2.37:8,2,0	0/0:19,0:16:38.99:0,39,692	0/1:9,0:17:5.90:6,0,23	0/0:4,0:3:7.58:0,8,133
chr10	103147220	.	G	GGCT	3498.23	PASS	AB=0.938;AC=34;AF=0.607;AN=56;BaseQRankSum=16.423;DP=528;FS=1.585;HRun=0;HaplotypeScore=180.7831;InbreedingCoeff=0.7033;MQ=93.06;MQ0=0;MQRankSum=-11.397;QD=9.72;ReadPosRankSum=5.850;VQSLOD=3.0580;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:44,0:44:96.81:512,97,0	1/1:6,0:6:10.64:51,11,0	0/0:32,0:32:87.07:0,87,1419	0/0:24,0:23:63.07:0,63,954	0/0:13,0:13:27.09:0,27,486	1/1:12,1:13:25.11:143,25,0	0/1:29,0:29:9.03:240,0,9	0/1:22,0:22:99:124,0,117	1/1:15,0:15:32.02:149,32,0	0/0:19,0:19:54.18:0,54,1005	0/0:12,0:12:24.08:0,24,447	0/0:25,0:25:75.26:0,75,1397	1/1:27,0:27:67.36:322,67,0	1/1:14,0:14:27.67:138,28,0	1/1:14,0:14:32.13:146,32,0	0/0:16,0:16:48.15:0,48,858	1/1:25,0:25:59.51:275,60,0	1/1:18,0:18:8.38:154,8,0	0/1:22,0:22:11.37:202,0,11	1/1:15,0:15:26.71:120,27,0	1/1:33,0:32:63.99:282,64,0	0/1:6,3:9:7.89:82,0,8	1/1:8,1:9:16.87:103,17,0	1/1:21,0:21:42.88:204,43,0	1/1:11,0:11:24.90:124,25,0	0/0:18,0:18:48.16:0,48,890	1/1:13,0:13:14.62:128,15,0	0/0:9,0:9:27.09:0,27,503
chr10	103147222	.	C	CTACA	25105.12	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=0.648;DP=568;FS=7.941;HRun=0;HaplotypeScore=121.7203;InbreedingCoeff=0.9915;MQ=88.90;MQ0=0;MQRankSum=-12.395;QD=62.14;ReadPosRankSum=2.957;VQSLOD=6.9527;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,39:48:99:2783,102,0	1/1:1,6:8:12.01:327,12,0	0/0:31,0:31:84.28:0,84,1521	0/0:22,0:22:34.10:0,34,858	0/0:10,0:10:27.09:0,27,513	1/1:1,9:12:27.09:738,27,0	1/1:5,26:35:63.22:1717,63,0	1/1:8,17:25:75.24:1850,75,0	1/1:4,16:22:45.15:1196,45,0	0/0:22,0:22:54.19:0,54,1042	0/0:9,0:9:24.08:0,24,457	0/0:26,0:26:75.26:0,75,1454	1/1:4,24:30:84.25:2214,84,0	1/1:3,12:16:33.11:901,33,0	1/1:4,12:18:36.12:984,36,0	0/0:17,0:17:51.15:0,51,913	1/1:1,25:31:66.23:1805,66,0	1/1:4,16:20:57.20:1558,57,0	1/1:6,19:26:74.28:1897,74,0	1/1:1,12:13:30.10:820,30,0	1/1:2,30:32:75.26:2039,75,0	1/1:3,3:9:18.06:486,18,0	1/1:1,5:7:18.06:492,18,0	1/1:2,20:23:48.16:1312,48,0	1/1:1,10:12:27.09:738,27,0	0/0:18,0:18:48.15:0,48,853	1/1:4,12:16:48.10:1249,48,0	0/0:9,0:9:27.09:0,27,523
chr10	103148029	.	AC	A	5835.59	PASS	AB=0.812;AC=40;AF=0.714;AN=56;BaseQRankSum=0.405;DP=485;FS=4.348;HRun=10;HaplotypeScore=61.4992;InbreedingCoeff=0.5530;MQ=74.51;MQ0=0;MQRankSum=-2.624;QD=13.73;ReadPosRankSum=5.131;VQSLOD=4.9284;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,19:27:22.66:440,23,0	1/1:3,5:9:20.03:162,20,0	0/0:18,0:19:25.63:0,26,274	0/0:13,0:13:24.04:0,24,240	0/0:9,0:9:5.93:0,6,50	1/1:6,7:13:4.29:189,4,0	1/1:3,19:22:50.50:463,50,0	1/1:10,0:26:15.59:57,16,0	1/1:2,13:15:35.99:312,36,0	0/1:11,1:12:14:14,0,88	0/0:7,0:7:9.02:0,9,99	0/1:14,2:16:19.03:19,0,258	1/1:4,10:14:35.99:312,36,0	0/1:6,7:13:9.19:158,0,9	1/1:5,14:19:24.64:298,25,0	0/1:8,3:11:51.09:51,0,172	1/1:7,29:36:98.97:858,99,0	1/1:10,27:37:80.97:703,81,0	1/1:6,0:16:24.41:73,24,0	1/1:4,0:10:13.02:44,13,0	1/1:5,0:33:42.29:124,42,0	1/1:3,16:19:50.97:442,51,0	1/1:3,8:11:20.99:182,21,0	1/1:8,22:30:65.98:573,66,0	1/1:1,10:11:26.99:234,27,0	0/0:5,0:6:5.08:0,5,90	1/1:3,0:25:42.48:125,42,0	0/0:6,0:6:5.07:0,5,94
chr10	103148487	.	C	CGAGTGAGTG	8079.56	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-3.375;DP=554;FS=1.059;HRun=0;HaplotypeScore=144.2783;InbreedingCoeff=0.9949;MQ=80.48;MQ0=0;MQRankSum=-11.784;QD=98.53;ReadPosRankSum=-2.122;VQSLOD=4.4119;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,114,3099	0/0:13,0:13:36.12:0,36,994	0/0:16,0:16:30.10:0,30,797	0/0:15,0:15:30.10:0,30,825	0/0:16,0:16:42.14:0,42,1243	0/0:19,0:19:57.20:0,57,1688	0/0:26,0:26:66.19:0,66,1763	1/1:14,3:18:45.14:1813,45,0	0/0:23,0:23:69.24:0,69,2027	0/0:15,0:15:39.13:0,39,1139	0/0:13,0:13:30.10:0,30,889	0/0:16,0:16:42.14:0,42,1229	0/0:18,0:18:45.14:0,45,1206	0/0:19,0:19:54.19:0,54,1600	0/0:21,0:21:51.18:0,51,1479	0/0:18,0:18:54.19:0,54,1584	0/0:35,0:35:96.33:0,96,2791	0/0:34,0:34:93.32:0,93,2692	1/1:6,5:12:33.08:1374,33,0	1/1:7,7:15:24.08:1119,24,0	1/1:7,4:13:15.05:712,15,0	0/0:15,0:15:33.11:0,33,972	0/0:14,0:14:27.09:0,27,764	0/0:38,0:38:99:0,102,2974	0/0:11,0:11:30.10:0,30,889	0/0:14,0:14:39.13:0,39,1155	1/1:8,15:24:65.76:3060,66,0	0/0:20,0:20:57.20:0,57,1687
chr10	103150786	.	ACCACCCC	A	18919.17	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=8.657;DP=524;FS=29.798;HRun=0;HaplotypeScore=136.1064;InbreedingCoeff=0.9940;MQ=65.23;MQ0=0;MQRankSum=-12.652;QD=48.26;ReadPosRankSum=8.731;VQSLOD=2.2834;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,37:38:69.24:1795,69,0	1/1:0,15:15:32.91:801,33,0	0/0:16,0:15:39.01:0,39,718	0/0:15,0:14:19.97:0,20,447	0/0:15,0:15:35.70:0,36,843	1/1:0,24:24:57.11:1371,57,0	1/1:0,25:25:57.20:1487,57,0	1/1:2,29:31:78.69:1209,79,0	1/1:0,11:11:30.10:783,30,0	0/0:17,0:17:39.08:0,39,693	0/0:7,0:7:15.04:0,15,421	0/0:16,0:16:45.08:0,45,1598	1/1:0,12:12:27.09:704,27,0	1/1:0,18:18:42.14:1092,42,0	1/1:1,23:24:57.20:1487,57,0	0/0:20,0:20:60.18:0,60,1596	1/1:0,20:20:36.08:882,36,0	1/1:2,17:19:27.09:693,27,0	1/1:3,18:21:54.01:938,54,0	1/1:1,17:18:35.91:701,36,0	1/1:3,21:24:18.06:469,18,0	1/1:2,17:19:42.14:1087,42,0	1/1:2,18:20:33.53:783,34,0	1/1:0,13:13:21.07:548,21,0	1/1:2,11:14:27.09:681,27,0	0/0:15,0:15:45.12:0,45,1178	1/1:0,26:26:54.18:1409,54,0	0/0:11,0:11:33.07:0,33,1049
chr10	103152613	.	G	GCACA	3073.34	PASS	AB=0.826;AC=28;AF=0.538;AN=52;BaseQRankSum=-3.263;DP=621;FS=5.034;HRun=0;HaplotypeScore=120.4957;InbreedingCoeff=0.2732;MQ=65.73;MQ0=8;MQRankSum=1.754;QD=7.27;ReadPosRankSum=-1.981;VQSLOD=2.0956;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:38:13.02:159,13,0	1/1:6,0:6:3.01:38,3,0	./.	./.	0/0:13,0:15:12.03:0,12,165	1/1:9,6:18:8.76:153,9,0	1/1:21,7:33:26.17:423,26,0	1/1:15,0:15:2.97:20,3,0	1/1:14,5:22:14.71:293,15,0	0/1:16,0:15:7.96:8,0,65	0/0:8,0:9:9.02:0,9,120	0/1:16,0:17:3.42:3,0,84	1/1:7,8:18:21.28:386,21,0	0/1:12,8:23:22.44:407,0,22	0/1:12,0:21:25.77:26,0,141	0/0:11,0:11:6.49:0,6,90	0/1:31,9:50:6.29:524,0,6	1/1:14,13:29:11.88:281,12,0	0/0:9,0:12:3:0,3,28	0/0:6,0:14:9.01:0,9,84	0/0:28,0:43:6.01:0,6,56	1/1:14,6:23:3.01:71,3,0	0/1:9,1:11:0:0,0,0	0/1:28,6:40:66.41:267,0,66	1/1:11,8:22:6.02:141,6,0	0/1:17,0:17:42.51:43,0,147	0/0:11,0:21:11.93:0,12,111	0/0:5,0:6:6.01:0,6,74
chr10	103152888	.	CA	C	5496.03	PASS	AB=1.000;AC=54;AF=0.964;AN=56;BaseQRankSum=1.156;DP=483;FS=0.000;HRun=1;HaplotypeScore=166.4925;InbreedingCoeff=-0.0550;MQ=76.17;MQ0=4;MQRankSum=-4.399;QD=11.38;ReadPosRankSum=6.083;VQSLOD=3.1679;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:72.58:367,73,0	1/1:7,0:7:19.19:93,19,0	0/1:17,0:17:23.18:23,0,76	0/1:11,0:11:36.19:36,0,48	1/1:6,0:6:4:40,4,0	1/1:18,0:18:40.19:206,40,0	1/1:25,0:25:50.91:301,51,0	1/1:33,0:33:51.62:368,52,0	1/1:26,0:25:44.44:303,44,0	1/1:11,1:11:10.50:103,10,0	1/1:4,1:5:0.32:21,0,0	1/1:17,1:18:45.38:244,45,0	1/1:25,0:25:62.88:340,63,0	1/1:24,0:24:63.60:343,64,0	1/1:24,0:24:63.13:316,63,0	1/1:17,0:16:39.26:201,39,0	1/1:25,0:24:65.01:325,65,0	1/1:19,0:19:50.64:254,51,0	1/1:15,0:14:29.32:173,29,0	1/1:11,0:11:25.68:145,26,0	1/1:26,0:26:41.02:202,41,0	1/1:12,1:13:18.68:167,19,0	1/1:4,0:3:5.93:40,6,0	1/1:20,0:20:36.40:204,36,0	1/1:16,0:16:39.81:209,40,0	1/1:15,0:14:36.19:187,36,0	1/1:16,0:16:43.34:243,43,0	1/1:3,0:3:8.47:42,8,0
chr10	103152890	.	C	CCA	8938.44	PASS	AB=1.000;AC=54;AF=0.964;AN=56;BaseQRankSum=-1.456;DP=497;FS=0.000;HRun=0;HaplotypeScore=169.1107;InbreedingCoeff=-0.0495;MQ=77.37;MQ0=4;MQRankSum=-3.980;QD=17.98;ReadPosRankSum=0.910;VQSLOD=4.6775;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:72.56:657,73,0	1/1:7,0:7:17.71:112,18,0	0/1:17,0:17:54.68:153,0,55	0/1:13,0:13:55.88:108,0,56	1/1:7,0:7:8.92:71,9,0	1/1:20,0:20:41.30:260,41,0	1/1:25,0:25:62.13:470,62,0	1/1:29,2:31:85.99:697,86,0	1/1:24,1:24:66.39:452,66,0	1/1:11,1:11:23.34:149,23,0	1/1:7,0:7:6.01:82,6,0	1/1:18,0:18:47.23:335,47,0	1/1:24,0:24:67.95:496,68,0	1/1:24,0:24:64.90:472,65,0	1/1:24,0:24:64.90:459,65,0	1/1:16,1:16:41.46:350,41,0	1/1:25,0:24:68.08:534,68,0	1/1:18,0:18:53.23:376,53,0	1/1:15,1:15:38.30:340,38,0	1/1:13,0:13:29.75:265,30,0	1/1:28,0:28:45:422,45,0	1/1:15,0:15:30.03:258,30,0	1/1:2,3:4:5.78:31,6,0	1/1:19,0:19:44.47:365,44,0	1/1:18,0:18:44.53:390,45,0	1/1:17,0:16:38.30:277,38,0	1/1:17,0:17:43.93:284,44,0	1/1:3,0:3:8.92:74,9,0
chr10	103155222	.	C	CTT	12115.62	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-13.230;DP=647;FS=16.257;HRun=9;HaplotypeScore=73.4738;InbreedingCoeff=0.9832;MQ=72.70;MQ0=0;MQRankSum=-1.542;QD=34.13;ReadPosRankSum=1.370;VQSLOD=3.7505;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,45:53:99:1901,126,0	1/1:2,14:16:36.12:554,36,0	0/0:13,0:13:7.71:0,8,195	0/0:9,0:9:15.02:0,15,151	0/0:16,0:16:42.07:0,42,447	1/1:3,15:18:36.12:554,36,0	1/1:3,26:31:72.24:1097,72,0	0/0:31,0:31:72.13:0,72,759	1/1:1,20:22:53.67:794,54,0	0/0:31,0:31:84.19:0,84,894	0/0:14,0:14:42.11:0,42,447	0/0:23,0:23:68.91:0,69,714	1/1:3,19:22:22.27:753,22,0	1/1:3,25:29:69.23:1054,69,0	1/1:4,15:20:42.14:629,42,0	0/0:14,0:14:39.08:0,39,415	1/1:1,23:27:65.08:910,65,0	1/1:2,17:20:47.65:702,48,0	0/0:33,0:33:78.13:0,78,810	0/0:19,0:19:54.13:0,54,575	0/0:28,0:28:63.12:0,63,670	1/1:3,22:26:68.68:995,69,0	1/1:3,15:21:44.12:618,44,0	1/1:1,25:29:71.21:1033,71,0	1/1:5,13:20:12.62:523,13,0	0/0:19,0:19:48.09:0,48,511	0/0:29,0:31:92.69:0,93,941	0/0:11,0:11:33.08:0,33,351
chr10	103155631	.	C	CA	13608.41	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=17.161;DP=660;FS=14.998;HRun=1;HaplotypeScore=90.1117;InbreedingCoeff=0.9996;MQ=82.40;MQ0=1;MQRankSum=-2.540;QD=38.44;ReadPosRankSum=2.983;VQSLOD=3.7778;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,43:45:99:1694,117,0	1/1:1,11:12:33.11:476,33,0	0/0:19,0:19:38.43:0,38,484	0/0:19,0:18:36.47:0,36,318	0/0:16,0:16:45.13:0,45,570	1/1:1,20:21:60.20:868,60,0	1/1:1,29:30:84.28:1217,84,0	0/0:23,0:23:69.20:0,69,870	1/1:1,23:24:63.21:912,63,0	0/0:25,0:25:72.23:0,72,924	0/0:23,0:23:66.21:0,66,844	0/0:25,0:25:75.21:0,75,943	1/1:2,27:29:74.91:1059,75,0	1/1:0,28:28:78.26:1125,78,0	1/1:1,16:17:36.12:522,36,0	0/0:23,1:24:28.46:0,28,838	1/1:1,32:33:90.30:1301,90,0	1/1:1,28:29:78.22:1103,78,0	0/0:20,0:20:54.16:0,54,688	0/0:20,0:20:60.17:0,60,751	0/0:27,0:27:81.22:0,81,1017	1/1:0,25:25:66.22:945,66,0	1/1:0,11:11:27.09:391,27,0	1/1:0,28:28:81.27:1172,81,0	1/1:1,21:22:57.19:825,57,0	0/0:26,0:26:78.25:0,78,1012	0/0:29,0:29:81.26:0,81,1051	0/0:10,0:10:30.10:0,30,389
chr10	103158246	.	ATGTATG	A	69.89	PASS	AB=0.672;AC=1;AF=0.018;AN=56;BaseQRankSum=3.413;DP=1064;FS=0.000;HRun=0;HaplotypeScore=249.7454;InbreedingCoeff=-0.0182;MQ=56.11;MQ0=3;MQRankSum=0.741;QD=1.63;ReadPosRankSum=-0.542;VQSLOD=2.2887;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:86.62:0,87,2382	0/0:19,0:19:57.17:0,57,1789	0/0:30,0:20:57.19:0,57,1377	0/0:38,0:25:75.03:0,75,1631	0/0:37,0:37:99:0,108,3198	0/0:39,0:39:99:0,111,3452	0/0:31,0:31:83.19:0,83,2254	0/0:72,0:66:99:0,187,4089	0/0:44,0:44:89.85:0,90,2753	0/0:49,0:48:99:0,144,4496	0/0:20,0:20:54.16:0,54,1615	0/0:38,0:38:99:0,105,3339	0/0:39,0:39:99:0,117,3475	0/0:42,0:42:99:0,117,3529	0/1:22,21:43:81.14:144,0,81	0/0:45,0:45:99:0,123,3801	0/0:33,0:33:90.04:0,90,2730	0/0:22,0:22:57.13:0,57,1622	0/0:15,0:13:39.12:0,39,975	0/0:39,0:39:99:0,111,3579	0/0:95,0:95:99:0,269,8227	0/0:32,0:32:95.65:0,96,2838	0/0:30,0:30:84.26:0,84,2464	0/0:39,0:39:93.10:0,93,2656	0/0:33,0:33:99:0,99,2945	0/0:49,0:49:99:0,141,4329	0/0:36,0:36:99:0,108,3089	0/0:17,0:17:48.16:0,48,1490
chr10	103158355	.	A	ATGTG	8125.68	PASS	AB=0.737;AC=27;AF=0.482;AN=56;BaseQRankSum=-8.400;DP=1044;FS=2.294;HRun=0;HaplotypeScore=194.3123;InbreedingCoeff=0.7542;MQ=55.95;MQ0=19;MQRankSum=-1.469;QD=15.33;ReadPosRankSum=0.603;VQSLOD=4.2657;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,21:40:27.88:547,28,0	1/1:4,7:13:11.75:230,12,0	0/0:43,0:23:2.74:0,3,12	0/0:61,0:23:8.92:0,9,99	0/0:28,0:30:39.12:0,39,573	0/1:11,21:34:0.27:920,0,0	1/1:15,22:38:19.42:573,19,0	0/1:25,0:45:31.11:31,0,183	0/1:17,1:46:8.54:89,0,9	0/0:29,0:32:38.05:0,38,617	0/0:25,0:25:48.15:0,48,730	0/0:37,0:40:59.37:0,59,1138	1/1:10,12:24:18.05:317,18,0	1/1:19,30:54:51.31:1136,51,0	1/1:13,26:47:29.79:400,30,0	0/0:59,0:60:99:0,114,1669	1/1:3,13:19:32.58:677,33,0	1/1:9,9:20:21.51:343,22,0	0/0:11,0:16:2.18:0,2,99	0/0:14,0:26:37.29:0,37,359	0/0:37,0:71:52.15:0,52,621	1/1:11,18:34:8.57:218,9,0	1/1:9,18:27:27.09:652,27,0	1/1:14,30:53:56.87:1197,57,0	1/1:6,24:32:33.11:797,33,0	0/0:37,0:41:32.30:0,32,800	0/0:9,0:35:44.59:0,45,418	0/0:27,0:30:35.11:0,35,462
chr10	103159832	.	G	GCA	922.05	PASS	AB=0.972;AC=32;AF=0.615;AN=52;BaseQRankSum=1.753;DP=686;FS=0.948;HRun=0;HaplotypeScore=169.7059;InbreedingCoeff=0.1069;MQ=38.84;MQ0=4;MQRankSum=0.711;QD=1.77;ReadPosRankSum=-1.983;VQSLOD=2.5162;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:2.05:0,2,10	0/0:11,0:11:0.89:0,1,2	./.	./.	0/1:28,0:28:16.91:18,0,17	1/1:14,5:19:3.01:46,3,0	1/1:27,7:34:0.94:3,1,0	1/1:29,1:26:10.37:105,10,0	1/1:33,0:33:10.99:115,11,0	0/0:35,0:35:34.77:0,35,373	0/0:16,0:16:2.22:0,2,11	0/1:35,0:35:9.97:10,0,38	1/1:26,0:26:6.56:25,7,0	0/1:27,0:27:0.11:0,0,6	0/1:38,0:38:8.29:62,0,8	0/1:30,0:29:21.21:21,0,34	1/1:16,0:16:3.87:24,4,0	1/1:15,0:15:12.02:145,12,0	0/1:16,0:13:26.20:40,0,26	0/1:21,2:23:0:0,0,0	0/1:43,0:41:4.39:201,0,4	1/1:24,0:24:6.48:70,6,0	1/1:16,0:16:6:73,6,0	1/1:27,0:27:6.02:86,6,0	0/1:18,6:24:0:1,0,0	0/0:25,0:25:2.74:0,3,109	1/1:8,0:8:1.25:3,1,0	0/1:9,0:9:9.49:9,0,29
chr10	103161098	.	CTGTGTGTGTG	C	11721.30	PASS	AB=0.627;AC=35;AF=0.625;AN=56;BaseQRankSum=11.211;DP=702;FS=33.622;HRun=0;HaplotypeScore=223.3408;InbreedingCoeff=0.6821;MQ=54.67;MQ0=5;MQRankSum=-12.759;QD=25.93;ReadPosRankSum=1.659;VQSLOD=2.7465;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,16:34:27.09:789,27,0	1/1:9,2:11:3.01:91,3,0	0/0:51,0:32:24.52:0,25,661	0/0:45,0:20:14.64:0,15,470	0/0:19,0:20:42.13:0,42,1669	1/1:9,9:21:27.09:776,27,0	1/1:15,16:33:18.06:524,18,0	1/1:14,0:14:0.32:24,0,0	1/1:6,16:26:45.15:1297,45,0	0/0:18,0:25:57.19:0,57,2063	0/0:13,0:12:18.06:0,18,701	0/0:26,0:28:72.25:0,72,3452	1/1:7,23:32:63.21:1766,63,0	1/1:9,12:23:36.12:1048,36,0	0/1:9,1:21:72.01:272,0,72	0/0:25,0:26:54.19:0,54,2366	1/1:16,15:31:24.08:727,24,0	0/1:12,15:28:99:766,0,101	1/1:17,11:27:36.07:833,36,0	1/1:9,9:18:14.72:454,15,0	1/1:34,13:48:6.49:161,6,0	1/1:2,11:14:15.05:433,15,0	0/1:6,11:17:27.39:348,0,27	1/1:10,15:27:12.04:321,12,0	1/1:5,9:14:12.01:363,12,0	0/0:21,0:25:54.19:0,54,2427	1/1:1,10:11:24.08:727,24,0	0/0:16,0:17:49.31:0,49,1736
chr10	103161945	.	C	CA	5189.41	PASS	AB=0.754;AC=26;AF=0.481;AN=54;BaseQRankSum=-6.617;DP=617;FS=4.391;HRun=11;HaplotypeScore=63.4028;InbreedingCoeff=0.6131;MQ=58.09;MQ0=15;MQRankSum=1.897;QD=13.44;ReadPosRankSum=2.574;VQSLOD=5.1122;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,40:52:89.78:867,90,0	1/1:3,7:11:23.72:210,24,0	0/1:24,1:10:31.10:31,0,51	0/1:18,0:8:8.66:9,0,33	0/0:26,2:28:41.29:0,41,503	0/1:5,12:19:4.56:306,0,5	0/1:8,14:20:26.18:157,0,26	0/0:23,0:24:33.61:0,34,373	1/1:5,17:22:23.88:227,24,0	0/0:26,0:26:65.21:0,65,492	0/0:18,1:19:17.34:0,17,313	0/0:13,0:13:29.82:0,30,227	1/1:12,10:21:44.99:435,45,0	1/1:7,13:21:9.65:258,10,0	./.	0/0:11,0:12:28.93:0,29,215	1/1:7,23:30:54.10:546,54,0	1/1:7,22:28:24.53:401,25,0	0/0:25,0:23:48.03:0,48,350	0/0:23,0:23:56.73:0,57,436	0/1:12,5:15:3.56:4,0,159	1/1:6,10:17:26.89:258,27,0	0/1:7,14:21:4.39:322,0,4	1/1:5,24:30:39.72:570,40,0	1/1:3,23:28:44.60:590,45,0	0/0:23,2:25:15.09:0,15,353	0/0:25,0:25:29.07:0,29,405	0/0:11,0:10:20.83:0,21,156
chr10	103164853	.	G	GA	2383.10	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-7.434;DP=610;FS=8.315;HRun=9;HaplotypeScore=66.9455;InbreedingCoeff=0.9993;MQ=85.56;MQ0=0;MQRankSum=-0.668;QD=23.14;ReadPosRankSum=-2.786;VQSLOD=3.2745;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,102,886	0/0:13,0:13:29.99:0,30,260	0/0:29,0:29:29.63:0,30,358	0/0:15,0:15:25.43:0,25,198	0/0:20,0:20:50.96:0,51,439	0/0:19,0:19:50.99:0,51,443	0/0:22,0:22:62.97:0,63,543	1/1:4,19:23:57.12:612,57,0	0/0:16,0:17:44.02:0,44,371	0/0:22,0:22:53.98:0,54,469	0/0:15,0:15:38.95:0,39,331	0/0:22,0:22:53.96:0,54,469	0/0:17,0:17:41.97:0,42,365	0/0:27,0:27:71.96:0,72,621	0/0:22,0:22:59.97:0,60,517	0/0:24,0:24:68.97:0,69,595	0/0:29,0:29:74.97:0,75,651	0/0:14,0:14:41.95:0,42,358	1/1:5,16:21:37.99:472,38,0	1/1:1,17:18:47.98:479,48,0	1/1:3,21:24:54.15:597,54,0	0/0:16,0:16:38.99:0,39,339	0/0:22,0:22:38.08:0,38,337	0/0:31,0:31:80.98:0,81,703	0/0:19,0:19:47.72:0,48,416	0/0:31,0:31:56.93:0,57,495	1/1:4,13:17:36.10:398,36,0	0/0:21,0:21:53.97:0,54,469
chr10	103171146	.	C	CA	10981.71	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=7.328;DP=719;FS=5.376;HRun=6;HaplotypeScore=87.8747;InbreedingCoeff=0.9949;MQ=83.90;MQ0=0;MQRankSum=-0.803;QD=30.50;ReadPosRankSum=4.729;VQSLOD=5.1640;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,56:62:99:1764,141,0	1/1:1,11:12:27.09:338,27,0	0/0:27,0:25:24.27:0,24,418	0/0:36,0:34:68.20:0,68,613	0/0:23,0:23:69.12:0,69,687	1/1:0,16:16:45.14:563,45,0	1/1:4,29:33:66.21:827,66,0	0/0:30,0:30:72.11:0,72,711	1/1:1,25:26:66.21:827,66,0	0/0:25,0:25:72.11:0,72,711	0/0:18,0:18:54.12:0,54,550	0/0:24,0:24:63.08:0,63,614	1/1:5,24:29:63.20:783,63,0	1/1:1,13:14:11.56:456,12,0	1/1:1,27:28:75.24:939,75,0	0/0:21,0:21:63.12:0,63,629	1/1:1,23:24:69.22:864,69,0	1/1:0,22:22:60.19:751,60,0	0/0:19,0:19:44.62:0,45,425	0/0:26,0:26:60.09:0,60,592	0/0:46,0:46:99:0,126,1254	1/1:4,20:25:63.03:765,63,0	1/1:2,17:19:48.15:601,48,0	1/1:3,30:33:81.26:1014,81,0	1/1:1,16:17:39.12:488,39,0	0/0:24,0:24:72.11:0,72,710	0/0:27,0:27:63.09:0,63,625	0/0:12,0:12:35.95:0,36,328
chr10	103175556	.	TTC	T	481.54	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.150;DP=499;FS=3.754;HRun=0;HaplotypeScore=78.9427;InbreedingCoeff=0.9261;MQ=73.01;MQ0=0;MQRankSum=-2.129;QD=28.33;ReadPosRankSum=0.873;VQSLOD=4.5156;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:63.19:0,63,1014	0/0:9,0:9:24.04:0,24,377	0/0:29,0:26:72.24:0,72,1154	0/0:19,0:18:41.84:0,42,680	0/0:16,0:16:39.13:0,39,662	0/0:21,0:21:57.18:0,57,951	0/0:17,0:17:42.14:0,42,713	0/0:30,0:30:65.43:0,65,1052	0/0:17,0:17:36.11:0,36,591	0/0:12,0:12:27.08:0,27,430	0/0:15,0:15:42.14:0,42,702	0/0:19,0:19:45.11:0,45,715	0/0:16,0:16:30.10:0,30,514	0/0:14,0:14:36.12:0,36,586	1/1:3,14:17:45.13:576,45,0	0/0:19,0:19:47.17:0,47,765	0/0:25,0:25:60.18:0,60,994	0/0:16,0:16:33.07:0,33,531	0/0:6,0:6:15.05:0,15,257	0/0:13,0:13:27.09:0,27,463	0/0:28,0:28:60:0,60,926	0/0:14,0:14:36.12:0,36,617	0/0:16,0:16:42.14:0,42,685	0/0:27,0:27:61.03:0,61,1025	0/0:19,0:19:39.12:0,39,624	0/0:18,0:18:48.15:0,48,773	0/0:17,0:17:33.11:0,33,558	0/0:4,0:4:9.01:0,9,126
chr10	103175587	.	TTC	T	123.62	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.822;DP=435;FS=1.209;HRun=0;HaplotypeScore=105.3452;InbreedingCoeff=0.6952;MQ=62.75;MQ0=14;MQRankSum=-0.827;QD=7.73;ReadPosRankSum=0.734;VQSLOD=3.4792;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:58.17:0,58,876	0/0:9,0:9:12.46:0,12,169	0/0:21,0:12:36.09:0,36,686	0/0:18,0:15:34.72:0,35,741	0/0:18,0:18:51.17:0,51,1014	0/0:19,0:18:46.30:0,46,732	0/0:10,0:10:17.98:0,18,283	0/0:19,0:18:47.35:0,47,842	0/0:14,0:13:27.05:0,27,440	0/0:11,0:11:30.10:0,30,590	0/0:14,0:14:42.14:0,42,832	0/0:10,0:9:27.05:0,27,477	0/0:14,0:14:31.12:0,31,424	0/0:13,0:13:30:0,30,420	1/1:12,4:16:4.56:202,5,0	0/0:21,0:21:54.19:0,54,1094	0/0:20,0:20:45.49:0,45,664	0/0:11,0:10:24.08:0,24,424	0/0:6,0:5:15.04:0,15,222	0/0:17,0:17:34.16:0,34,493	0/0:20,0:19:28.21:0,28,427	0/0:15,0:15:35.52:0,36,565	0/0:21,0:21:38.87:0,39,487	0/0:23,0:23:28.71:0,29,452	0/0:11,0:11:28.33:0,28,474	0/0:14,0:13:18:0,18,757	0/0:17,0:17:24.82:0,25,599	0/0:6,0:6:5.48:0,5,121
chr10	103175591	.	TACACACAC	T	1993.03	PASS	AB=0.684;AC=25;AF=0.500;AN=50;BaseQRankSum=5.859;DP=473;FS=6.854;HRun=0;HaplotypeScore=135.8791;InbreedingCoeff=0.4737;MQ=58.07;MQ0=20;MQRankSum=-7.228;QD=8.30;ReadPosRankSum=-1.313;VQSLOD=1.2564;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,7:9:2.66:74,3,0	./.	0/0:16,0:13:0:0,0,0	0/0:19,0:20:42.62:0,43,1432	1/1:12,11:22:12.04:295,12,0	1/1:6,5:11:2.57:61,3,0	0/0:18,0:16:2.08:0,2,6	0/1:8,7:13:13.95:69,0,14	0/0:15,0:14:24.08:0,24,791	0/0:17,0:17:33.11:0,33,1230	0/0:12,0:11:15.05:0,15,541	1/1:6,9:15:12.04:290,12,0	1/1:4,7:11:5.97:150,6,0	0/0:16,0:16:12.51:0,13,221	0/0:23,0:22:30.06:0,30,1007	1/1:14,9:23:8.61:224,9,0	1/1:8,5:12:6.02:150,6,0	0/1:3,0:5:14.05:63,0,14	0/1:6,3:18:8.47:53,0,8	./.	1/1:10,7:17:9.03:217,9,0	1/1:7,16:22:5.87:148,6,0	0/1:16,7:24:0:0,0,0	1/1:6,8:14:12.04:296,12,0	0/0:13,0:13:24.55:0,25,810	0/1:11,0:18:7.28:72,0,7	0/0:5,0:6:9.03:0,9,266
chr10	103175670	.	G	GTA	423.43	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.935;DP=599;FS=2.816;HRun=0;HaplotypeScore=104.4814;InbreedingCoeff=0.9092;MQ=62.82;MQ0=0;MQRankSum=-2.873;QD=19.25;ReadPosRankSum=-2.952;VQSLOD=3.1835;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:51.15:0,51,663	0/0:9,0:9:17.91:0,18,224	0/0:12,0:10:8.24:0,8,44	0/0:11,0:7:13.56:0,14,134	0/0:22,0:22:57.19:0,57,758	0/0:20,0:20:39.11:0,39,502	0/0:25,0:25:63.21:0,63,838	0/0:38,0:37:96.29:0,96,1228	0/0:22,0:22:50.97:0,51,647	0/0:22,0:22:54.18:0,54,718	0/0:25,0:25:63.12:0,63,785	0/0:18,0:18:45.11:0,45,565	0/0:20,0:20:48.13:0,48,606	0/0:18,0:18:45.11:0,45,567	1/1:1,21:22:29.98:518,30,0	0/0:27,0:27:72.21:0,72,927	0/0:27,0:27:57.19:0,57,757	0/0:23,0:23:54.11:0,54,677	0/0:15,0:15:39.13:0,39,519	0/0:25,0:25:47.69:0,48,604	0/0:18,0:18:39.10:0,39,487	0/0:22,0:22:47.63:0,48,612	0/0:33,0:33:92.86:0,93,1184	0/0:17,0:17:29.76:0,30,381	0/0:21,0:21:45.12:0,45,570	0/0:22,0:22:66.21:0,66,865	0/0:23,0:23:51.17:0,51,677	0/0:15,0:15:45.07:0,45,532
chr10	103175767	.	T	TG	4527.85	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-12.452;DP=625;FS=9.316;HRun=3;HaplotypeScore=61.8565;InbreedingCoeff=0.9999;MQ=75.68;MQ0=0;MQRankSum=-0.094;QD=32.57;ReadPosRankSum=-0.690;VQSLOD=4.4306;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:83.04:0,83,971	0/0:14,0:14:39.07:0,39,431	0/0:18,0:19:50.59:0,51,498	0/0:18,0:17:38.76:0,39,372	0/0:19,0:19:51.14:0,51,591	0/0:22,0:22:63.08:0,63,696	0/0:27,0:27:72.18:0,72,828	1/1:3,36:39:99:1406,108,0	0/0:19,0:19:51.08:0,51,558	0/0:28,0:28:81.20:0,81,916	0/0:26,0:26:68.96:0,69,713	0/0:17,0:17:42.27:0,42,531	0/0:22,0:22:60.12:0,60,669	0/0:19,0:19:57.07:0,57,629	1/1:2,21:23:36.91:531,37,0	0/0:33,0:33:87.17:0,87,980	0/0:25,0:25:75.11:0,75,819	0/0:28,0:28:77.52:0,78,845	1/1:1,17:18:51.11:662,51,0	1/1:0,18:18:50.98:635,51,0	1/1:0,20:20:42.14:586,42,0	0/0:16,0:16:45.12:0,45,527	0/0:15,0:15:42.11:0,42,490	0/0:26,0:26:78.16:0,78,885	0/0:26,0:26:67.09:0,67,766	0/0:22,0:22:63.14:0,63,707	1/1:1,20:21:51.17:708,51,0	0/0:13,0:13:38.99:0,39,387
chr10	103177300	.	GCCAGGCTAGATCGA	G	1821.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.918;DP=692;FS=0.000;HRun=0;HaplotypeScore=262.9197;InbreedingCoeff=0.9932;MQ=79.89;MQ0=0;MQRankSum=-6.197;QD=107.13;ReadPosRankSum=2.418;VQSLOD=3.0975;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,129,8269	0/0:10,0:10:30.08:0,30,1495	0/0:13,0:13:33.11:0,33,1661	0/0:22,0:22:48.37:0,48,2614	0/0:20,0:20:54.17:0,54,2715	0/0:17,0:17:48.16:0,48,3178	0/0:30,0:30:87.28:0,87,5515	0/0:30,0:30:63.21:0,63,3588	0/0:24,0:24:60.18:0,60,3604	0/0:23,0:23:66.19:0,66,4228	0/0:17,0:17:51.18:0,51,3358	0/0:36,0:36:99:0,105,6658	0/0:23,0:23:69.24:0,69,4519	0/0:19,0:19:57.20:0,57,3537	1/1:1,16:17:48.16:1916,48,0	0/0:28,0:28:78.27:0,78,4959	0/0:42,0:41:99:0,123,7964	0/0:24,0:24:63.22:0,63,4317	0/0:13,0:13:24.08:0,24,1560	0/0:22,0:22:57.19:0,57,3500	0/0:58,0:58:99:0,157,10029	0/0:21,0:21:60.21:0,60,4013	0/0:17,0:17:42.14:0,42,2713	0/0:27,0:27:78.27:0,78,5194	0/0:18,0:18:54.19:0,54,3672	0/0:37,0:37:99:0,99,6434	0/0:27,0:26:81.28:0,81,5251	0/0:9,0:9:21.07:0,21,1027
chr10	103178233	.	C	CAGAGAGAGAG	3549.44	PASS	AB=0.955;AC=32;AF=0.667;AN=48;BaseQRankSum=-1.570;DP=584;FS=0.000;HRun=0;HaplotypeScore=168.4020;InbreedingCoeff=0.5131;MQ=66.65;MQ0=7;MQRankSum=-3.206;QD=8.74;ReadPosRankSum=-3.345;VQSLOD=1.6009;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:37:3.01:58,3,0	./.	./.	0/1:52,0:23:0:0,0,0	0/0:20,0:23:10.27:0,10,203	1/1:25,0:25:21.07:536,21,0	0/1:19,0:19:76.51:204,0,77	1/1:19,0:19:18.06:478,18,0	1/1:18,5:31:5.80:185,6,0	0/0:16,0:15:9.02:0,9,127	0/0:9,0:9:3.01:0,3,89	0/0:21,0:26:15.04:0,15,413	1/1:14,2:18:6.49:205,6,0	1/1:11,2:13:6.02:238,6,0	1/1:22,0:20:9.02:203,9,0	0/0:20,0:22:30.10:0,30,733	1/1:10,5:16:12.51:467,13,0	1/1:13,0:13:5.98:126,6,0	1/1:21,0:21:17.29:392,17,0	./.	1/1:30,0:29:8.65:116,9,0	./.	1/1:5,0:5:2.68:11,3,0	1/1:23,4:30:2.75:50,3,0	0/1:14,2:18:0.44:0,0,0	0/1:19,0:20:16.68:17,0,103	1/1:15,0:15:12.04:263,12,0	0/0:18,0:20:17.18:0,17,497
chr10	103180987	.	AC	A	6244.85	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=10.796;DP=625;FS=3.932;HRun=9;HaplotypeScore=72.5842;InbreedingCoeff=0.9911;MQ=66.26;MQ0=1;MQRankSum=-1.268;QD=20.47;ReadPosRankSum=4.636;VQSLOD=5.4308;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,23:31:66.03:604,66,0	1/1:1,12:13:24.01:220,24,0	0/0:23,1:15:32.45:0,32,335	0/0:20,0:17:20.44:0,20,167	0/0:14,0:14:36.06:0,36,393	1/1:2,11:13:33.01:302,33,0	1/1:5,31:37:80.07:720,80,0	0/0:18,0:18:23.98:0,24,243	1/1:3,18:21:13.41:377,13,0	0/0:21,0:21:45.13:0,45,519	0/0:9,0:9:15.52:0,16,175	0/0:28,0:28:69.20:0,69,794	1/1:5,13:18:33.01:302,33,0	1/1:2,22:24:66.03:603,66,0	0/0:23,0:23:57.16:0,57,650	0/0:22,0:22:66.16:0,66,735	1/1:3,21:24:54.01:494,54,0	1/1:0,28:28:81.04:741,81,0	0/0:14,0:14:17.38:0,17,322	0/0:12,0:12:30.06:0,30,328	0/0:58,1:62:99:0,117,1533	1/1:1,18:19:42.02:384,42,0	1/1:4,13:17:32.91:291,33,0	1/1:5,28:33:72.03:659,72,0	1/1:3,24:27:60.03:548,60,0	0/0:23,0:23:60.13:0,60,655	0/0:20,0:20:51.11:0,51,566	0/0:7,0:7:18.04:0,18,197
chr10	103181689	.	AT	A	8741.24	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=20.275;DP=656;FS=0.000;HRun=6;HaplotypeScore=142.0758;InbreedingCoeff=0.9855;MQ=80.74;MQ0=0;MQRankSum=-3.288;QD=27.23;ReadPosRankSum=5.673;VQSLOD=2.7837;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,53:58:99:1553,147,0	1/1:1,11:12:29.92:322,30,0	0/0:21,0:21:48.04:0,48,550	0/0:17,0:17:45.13:0,45,547	0/0:23,0:23:60.19:0,60,777	1/1:0,17:17:51.13:548,51,0	1/1:0,23:23:60.15:643,60,0	0/0:34,0:34:96.29:0,96,1223	1/1:1,13:14:36.09:387,36,0	0/0:32,0:32:93.29:0,93,1211	0/0:27,0:27:78.24:0,78,1009	0/0:25,0:25:63.20:0,63,828	1/1:0,21:21:57.14:613,57,0	1/1:0,19:19:48.12:515,48,0	0/0:26,0:26:72.22:0,72,933	0/0:16,0:16:48.12:0,48,600	1/1:1,30:31:78.19:838,78,0	1/1:2,34:36:90.22:967,90,0	0/0:15,0:15:42.11:0,42,514	0/0:32,0:32:90.28:0,90,1169	0/0:15,0:15:42.12:0,42,538	1/1:1,24:25:66.12:696,66,0	1/1:2,22:24:51.13:548,51,0	1/1:0,27:27:69.07:725,69,0	1/1:0,14:14:36.09:387,36,0	0/0:23,0:23:66.21:0,66,857	0/0:26,0:26:75.23:0,75,972	0/0:3,0:3:6.02:0,6,79
chr10	103182204	.	GT	G	6417.86	PASS	AB=0.778;AC=36;AF=0.643;AN=56;BaseQRankSum=12.241;DP=591;FS=8.316;HRun=13;HaplotypeScore=86.3725;InbreedingCoeff=0.8638;MQ=76.27;MQ0=0;MQRankSum=-0.444;QD=15.85;ReadPosRankSum=4.760;VQSLOD=5.3067;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,32:38:88.98:651,89,0	1/1:1,9:11:25.88:181,26,0	0/0:22,1:19:18.45:0,18,151	0/1:10,0:9:3.78:4,0,20	0/0:21,1:22:33.33:0,33,450	1/1:5,20:25:56.53:415,57,0	1/1:2,19:21:53.63:394,54,0	1/1:7,22:31:60.42:422,60,0	1/1:0,14:14:41.76:306,42,0	0/0:18,0:19:44.87:0,45,411	0/0:21,0:21:50.96:0,51,474	0/0:24,2:26:44.11:0,44,557	1/1:2,15:18:46.76:334,47,0	1/1:2,12:14:29.77:219,30,0	0/0:23,0:23:41.33:0,41,461	0/0:18,2:20:10.37:0,10,315	1/1:5,23:29:79.50:568,79,0	1/1:4,13:17:23.77:175,24,0	0/1:4,15:19:5.10:248,0,5	1/1:4,11:15:26.41:178,26,0	1/1:5,5:10:11.86:87,12,0	1/1:5,16:21:50.53:365,51,0	1/1:7,21:28:65.48:479,65,0	1/1:3,15:18:44.50:328,45,0	1/1:6,36:42:99:725,101,0	0/0:25,1:26:35.08:0,35,474	1/1:3,18:23:48.56:340,49,0	0/0:6,0:6:8.93:0,9,68
chr10	103182505	.	AAGG	A	13073.51	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=15.989;DP=680;FS=0.000;HRun=0;HaplotypeScore=115.8103;InbreedingCoeff=0.9998;MQ=89.30;MQ0=0;MQRankSum=-10.517;QD=40.73;ReadPosRankSum=4.892;VQSLOD=6.0544;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:39:99:1672,102,0	1/1:0,9:9:27.09:460,27,0	0/0:30,0:30:78.11:0,78,1418	0/0:34,0:32:45.35:0,45,1314	0/0:22,0:22:63.22:0,63,1451	1/1:0,26:26:63.22:1073,63,0	1/1:1,21:22:54.18:918,54,0	0/0:30,0:30:87.30:0,87,1920	1/1:2,21:23:54.12:887,54,0	0/0:23,0:23:69.22:0,69,1501	0/0:13,0:13:36.12:0,36,783	0/0:31,0:31:93.31:0,93,2020	1/1:1,30:31:81.75:1381,82,0	1/1:0,27:27:69.24:1175,69,0	0/0:31,0:31:93.32:0,93,2144	0/0:23,0:23:63.22:0,63,1450	1/1:0,22:22:54.18:921,54,0	1/1:0,21:21:39.13:665,39,0	0/0:24,0:24:72.25:0,72,1610	0/0:20,0:20:57.20:0,57,1314	0/0:25,0:25:75.26:0,75,1658	1/1:1,20:21:45.04:703,45,0	1/1:0,19:20:51.17:869,51,0	1/1:3,23:26:55.96:969,56,0	1/1:1,33:34:81.28:1379,81,0	0/0:23,0:23:69.23:0,69,1550	0/0:20,0:20:60.21:0,60,1363	0/0:10,0:10:30.10:0,30,646
chr10	103186460	.	ACACAC	A	2273.89	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=1.484;DP=729;FS=5.949;HRun=0;HaplotypeScore=147.1984;InbreedingCoeff=0.9870;MQ=60.23;MQ0=23;MQRankSum=-4.436;QD=20.12;ReadPosRankSum=-1.850;VQSLOD=2.9293;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:79.59:0,80,1859	0/0:12,0:12:27.09:0,27,586	0/0:46,0:8:18.53:0,19,347	0/0:28,0:10:19.68:0,20,236	0/0:19,0:19:51.17:0,51,1271	0/0:22,0:22:50.88:0,51,1043	0/0:20,0:20:54.18:0,54,1181	1/1:10,11:19:54.06:597,54,0	0/0:24,0:23:63.20:0,63,1414	0/0:23,0:23:66.22:0,66,1757	0/0:13,0:13:36.12:0,36,949	0/0:47,0:47:99:0,129,3174	0/0:21,0:21:60.19:0,60,1132	0/0:24,0:24:57.64:0,58,1204	0/0:23,0:23:27.09:0,27,446	0/0:29,0:29:75.25:0,75,1731	0/0:47,0:47:99:0,105,2241	0/0:32,0:32:75.25:0,75,1593	1/1:8,16:24:51.12:808,51,0	1/1:3,8:10:12.04:213,12,0	1/1:22,20:36:18.04:307,18,0	0/0:22,0:22:39.13:0,39,911	0/0:19,0:19:39.13:0,39,783	0/0:31,0:31:72.24:0,72,1547	0/0:29,0:29:51.17:0,51,1032	0/0:29,0:29:84.27:0,84,2016	1/1:2,13:15:27.09:521,27,0	0/0:10,0:10:30.10:0,30,709
chr10	103186465	.	C	CCA	7649.33	PASS	AB=0.628;AC=22;AF=0.393;AN=56;BaseQRankSum=-11.214;DP=723;FS=3.426;HRun=0;HaplotypeScore=96.3528;InbreedingCoeff=0.3746;MQ=58.91;MQ0=24;MQRankSum=2.621;QD=19.46;ReadPosRankSum=3.538;VQSLOD=5.1265;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,27:47:14.58:737,15,0	1/1:4,7:11:18.06:285,18,0	0/0:50,0:10:9.03:0,9,106	0/0:29,0:8:7.15:0,7,29	0/0:18,0:18:27.07:0,27,309	0/1:7,14:22:34.96:440,0,35	1/1:4,17:21:26.94:648,27,0	0/1:12,0:18:5.42:31,0,5	1/1:6,18:23:12.60:678,13,0	0/0:25,0:25:54.16:0,54,638	0/0:13,0:13:21.05:0,21,237	0/0:40,0:44:92.60:0,93,1005	0/1:9,12:22:45.73:437,0,46	0/1:10,15:25:31.96:482,0,32	1/1:0,0:23:25.88:199,26,0	0/0:27,0:27:57.16:0,57,662	0/1:9,34:43:37.38:1146,0,37	1/1:7,26:35:43.56:848,44,0	0/0:16,0:21:8.74:0,9,95	0/0:8,0:10:8.39:0,8,39	0/0:24,0:32:13.94:0,14,64	0/1:7,16:23:19.65:395,0,20	1/1:8,8:16:26.92:380,27,0	0/1:16,16:33:22.75:596,0,23	0/1:12,16:28:62:347,0,62	0/0:30,0:30:63.17:0,63,725	0/0:13,0:14:22.38:0,22,103	0/0:9,0:10:23.90:0,24,262
chr10	103186962	.	TCACACACACACACACA	T	506.56	PASS	AB=0.857;AC=5;AF=0.093;AN=54;BaseQRankSum=4.533;DP=486;FS=1.420;HRun=0;HaplotypeScore=179.1624;InbreedingCoeff=0.4087;MQ=70.93;MQ0=23;MQRankSum=-2.697;QD=13.69;ReadPosRankSum=-0.295;VQSLOD=2.7241;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:33.58:0,34,1882	0/0:4,0:4:6.02:0,6,272	0/0:32,0:20:3.01:0,3,94	0/0:36,0:28:3.01:0,3,64	0/0:6,0:5:9.03:0,9,469	0/0:18,0:17:21.07:0,21,1070	0/0:33,0:32:29.58:0,30,1389	1/1:13,4:17:9.49:171,9,0	0/0:18,0:16:9.90:0,10,286	0/0:9,0:8:9.02:0,9,434	0/0:7,0:7:3.01:0,3,157	0/0:13,0:13:18.06:0,18,1052	0/0:15,0:14:30.10:0,30,1417	0/0:23,0:22:27.55:0,28,1179	0/0:9,0:10:6.91:0,7,211	0/0:16,0:15:18.51:0,19,792	0/0:24,0:23:47.37:0,47,2272	0/0:22,0:21:39.09:0,39,1730	0/1:10,0:12:15.94:120,0,16	./.	0/0:18,0:17:5.05:0,5,78	0/0:14,0:14:6:0,6,95	0/0:12,0:11:12.03:0,12,612	0/0:37,0:34:35.70:0,36,2140	0/0:17,0:17:15.05:0,15,866	0/0:19,0:19:30.10:0,30,1416	1/1:4,4:8:9.03:330,9,0	0/0:7,0:5:3.01:0,3,203
chr10	103187190	.	AT	A	1898.22	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.790;DP=487;FS=0.000;HRun=5;HaplotypeScore=61.8963;InbreedingCoeff=0.9868;MQ=76.40;MQ0=3;MQRankSum=0.192;QD=18.98;ReadPosRankSum=0.510;VQSLOD=2.9725;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.08:0,66,809	0/0:5,0:5:12.03:0,12,149	0/0:42,0:18:22.74:0,23,274	0/0:28,0:18:27.16:0,27,247	0/0:20,0:20:57.15:0,57,729	0/0:27,0:27:75.17:0,75,952	0/0:8,0:8:21.06:0,21,265	1/1:5,26:31:75:658,75,0	0/0:8,0:8:21.07:0,21,287	0/0:20,0:20:54.17:0,54,725	0/0:17,0:17:48.15:0,48,640	0/0:12,0:12:36.08:0,36,430	0/0:11,0:11:30.09:0,30,393	0/0:13,0:13:27.08:0,27,352	0/0:19,0:19:54.13:0,54,664	0/0:14,0:14:39.11:0,39,505	0/0:16,0:16:42.07:0,42,520	0/0:19,0:19:36.69:0,37,677	1/1:3,19:22:54.72:479,55,0	1/1:6,16:22:55.77:482,56,0	1/1:0,10:10:18.01:165,18,0	0/0:11,0:11:24.04:0,24,279	0/0:14,0:14:42.12:0,42,540	0/0:16,0:16:45.07:0,45,560	0/0:18,0:18:54.17:0,54,721	0/0:16,0:16:39.05:0,39,470	1/1:0,15:15:32.98:288,33,0	0/0:8,0:8:24.08:0,24,328
chr10	103187442	.	GT	G	7322.86	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=5.599;DP=582;FS=6.692;HRun=9;HaplotypeScore=77.4973;InbreedingCoeff=0.9974;MQ=69.66;MQ0=8;MQRankSum=-3.727;QD=22.12;ReadPosRankSum=1.168;VQSLOD=5.7084;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,14:21:49.42:440,49,0	1/1:1,7:8:24:216,24,0	0/0:61,2:23:25.45:0,25,264	0/0:57,1:23:24.71:0,25,392	0/0:21,0:21:54.02:0,54,593	1/1:7,12:19:44.98:400,45,0	1/1:4,9:13:29.95:265,30,0	1/1:5,34:38:99:892,102,0	1/1:4,10:14:39:351,39,0	0/0:22,0:22:63:0,63,677	0/0:19,0:19:54.13:0,54,595	0/0:18,0:18:43.36:0,43,478	1/1:1,9:10:27.01:247,27,0	1/1:6,6:12:19.49:219,19,0	1/1:13,0:13:33.43:181,33,0	0/0:18,0:18:45.11:0,45,499	1/1:9,17:26:62.89:557,63,0	1/1:6,11:17:41.94:369,42,0	1/1:5,21:25:62.93:552,63,0	1/1:2,23:25:65.94:587,66,0	1/1:5,13:19:26.42:242,26,0	1/1:1,9:10:27.01:247,27,0	1/1:1,14:15:45.02:411,45,0	1/1:5,10:15:45.02:407,45,0	1/1:2,17:19:54.03:493,54,0	0/0:19,0:19:57.14:0,57,642	1/1:0,10:10:27.01:247,27,0	0/0:12,0:12:36.09:0,36,404
chr10	103187468	.	G	GT	2922.85	PASS	AB=0.796;AC=26;AF=0.464;AN=56;BaseQRankSum=2.804;DP=666;FS=6.715;HRun=12;HaplotypeScore=93.7357;InbreedingCoeff=0.3097;MQ=57.44;MQ0=26;MQRankSum=-6.299;QD=6.58;ReadPosRankSum=0.987;VQSLOD=2.4225;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,21:27:16.80:293,17,0	0/1:3,9:12:16.77:177,0,17	0/1:93,0:18:5.55:6,0,64	0/1:84,0:23:26.35:30,0,26	0/0:25,1:26:27.04:0,27,360	1/1:5,10:16:10.98:250,11,0	1/1:5,5:10:18.02:170,18,0	0/0:34,0:34:46.66:0,47,330	0/1:8,10:18:5.69:263,0,6	0/1:20,2:22:12.04:12,0,231	0/1:13,2:16:20.55:21,0,185	0/0:20,1:24:30.44:0,30,358	0/1:6,5:11:38.60:143,0,39	1/1:7,4:11:2.14:182,2,0	0/0:1,0:17:28.33:0,28,83	0/0:20,0:21:40.77:0,41,288	1/1:9,13:22:11.18:269,11,0	1/1:8,10:20:29.71:255,30,0	0/0:24,1:24:26.27:0,26,332	0/0:24,0:25:46.68:0,47,334	0/1:14,1:14:28:28,0,145	0/1:6,4:10:0.77:154,0,1	1/1:5,10:15:33.03:312,33,0	1/1:8,8:16:18.02:170,18,0	0/1:9,14:24:27.70:383,0,28	0/0:22,0:22:47.66:0,48,348	0/0:15,0:15:32.75:0,33,237	0/0:11,0:11:25.89:0,26,181
chr10	103187731	.	AGAAG	A	7417.18	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.256;DP=723;FS=3.604;HRun=0;HaplotypeScore=124.5124;InbreedingCoeff=0.9998;MQ=87.36;MQ0=0;MQRankSum=-9.771;QD=49.78;ReadPosRankSum=-1.589;VQSLOD=5.4992;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,3949	0/0:10,0:10:30.10:0,30,830	0/0:24,0:24:66.19:0,66,1593	0/0:28,0:28:78.25:0,78,1951	0/0:24,0:24:72.25:0,72,1965	0/0:23,0:23:66.17:0,66,1599	0/0:31,0:31:90.31:0,90,2439	1/1:1,29:30:87.27:1660,87,0	0/0:21,0:21:63.17:0,63,1664	0/0:27,0:27:81.28:0,81,2240	0/0:15,0:15:45.14:0,45,1189	0/0:22,0:22:66.23:0,66,1776	0/0:30,0:30:87.28:0,87,2330	0/0:37,0:37:99:0,111,2987	0/0:30,0:30:87.29:0,87,2377	0/0:35,0:35:99:0,105,2806	0/0:20,0:20:57.20:0,57,1573	0/0:17,0:17:51.12:0,51,1259	1/1:1,21:22:63.15:1165,63,0	1/1:1,27:28:78.27:1519,78,0	1/1:0,38:38:78.09:1485,78,0	0/0:19,0:19:57.20:0,57,1564	0/0:17,0:17:51.16:0,51,1317	0/0:38,0:38:99:0,114,3131	0/0:23,0:23:66.23:0,66,1829	0/0:23,0:23:66.23:0,66,1840	1/1:0,31:31:81.28:1588,81,0	0/0:10,0:10:30.10:0,30,839
chr10	103188792	.	AG	A	3582.26	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.712;DP=508;FS=3.004;HRun=4;HaplotypeScore=51.9074;InbreedingCoeff=0.9917;MQ=92.63;MQ0=0;MQRankSum=-2.378;QD=31.70;ReadPosRankSum=-0.620;VQSLOD=3.6008;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.30:0,93,1283	0/0:4,0:4:12.04:0,12,168	0/0:20,0:20:54.15:0,54,702	0/0:22,0:22:46.19:0,46,614	0/0:16,0:16:39.13:0,39,545	0/0:25,0:25:72.23:0,72,983	0/0:23,0:23:63.21:0,63,881	1/1:4,12:16:36.08:417,36,0	0/0:15,0:15:36.12:0,36,504	0/0:15,0:15:36.11:0,36,490	0/0:11,0:11:30.10:0,30,420	0/0:27,0:27:78.26:0,78,1091	0/0:8,0:8:24.08:0,24,336	0/0:14,0:14:42.14:0,42,588	0/0:14,0:14:42.14:0,42,587	0/0:11,0:11:33.11:0,33,461	0/0:24,0:24:69.23:0,69,966	0/0:25,0:25:72.24:0,72,1008	1/1:1,15:16:45.14:539,45,0	1/1:1,8:9:27.08:322,27,0	1/1:2,50:52:99:1656,138,0	0/0:12,0:12:33.10:0,33,444	0/0:11,0:11:33.11:0,33,458	0/0:25,0:25:66.22:0,66,924	0/0:12,0:12:36.12:0,36,504	0/0:16,0:16:48.16:0,48,672	1/1:2,18:20:54.17:648,54,0	0/0:12,0:12:36.12:0,36,504
chr10	103189900	.	TGCCCACGTTAG	T	2579.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.431;DP=754;FS=0.728;HRun=0;HaplotypeScore=235.3537;InbreedingCoeff=0.9972;MQ=84.57;MQ0=0;MQRankSum=-7.508;QD=75.87;ReadPosRankSum=1.161;VQSLOD=3.5176;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,172,9216	0/0:9,0:9:27.09:0,27,1483	0/0:31,0:31:87.26:0,87,4090	0/0:17,0:17:26.10:0,26,1746	0/0:25,0:25:75.26:0,75,4155	0/0:31,0:30:84.29:0,84,4644	0/0:23,0:23:63.18:0,63,3094	0/0:47,0:47:99:0,126,6268	0/0:37,0:37:99:0,108,6102	0/0:29,0:29:84.29:0,84,4221	0/0:17,0:17:51.18:0,51,2523	0/0:25,0:25:75.26:0,75,4148	0/0:22,0:22:66.23:0,66,3628	0/0:22,0:22:63.22:0,63,3569	1/1:5,29:34:75.26:2674,75,0	0/0:31,0:31:93.30:0,93,5051	0/0:24,0:24:69.24:0,69,3707	0/0:20,0:20:60.21:0,60,3127	0/0:24,0:24:72.25:0,72,3643	0/0:22,0:22:66.23:0,66,3344	0/0:44,0:44:99:0,129,7006	0/0:26,0:26:72.25:0,72,3886	0/0:15,0:15:45.15:0,45,2570	0/0:27,0:27:78.27:0,78,4097	0/0:17,0:17:51.15:0,51,2789	0/0:30,0:30:90.29:0,90,4492	0/0:36,0:35:99:0,99,5271	0/0:10,0:10:30.10:0,30,1530
chr10	103190833	.	AACACAC	A	237.46	PASS	AB=0.947;AC=19;AF=0.475;AN=40;BaseQRankSum=1.979;DP=505;FS=7.434;HRun=0;HaplotypeScore=99.8911;InbreedingCoeff=0.4244;MQ=74.24;MQ0=10;MQRankSum=-1.030;QD=1.29;ReadPosRankSum=0.352;VQSLOD=1.1185;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,2:26:3.01:55,3,0	./.	./.	./.	0/0:10,0:10:9.03:0,9,156	1/1:14,0:14:0.47:1,0,0	1/1:25,0:24:5.03:60,5,0	./.	1/1:5,3:8:3.01:60,3,0	0/0:13,0:12:3.48:0,3,38	0/0:7,0:6:6:0,6,65	0/0:16,0:16:3.01:0,3,96	./.	./.	1/1:17,0:20:3.01:42,3,0	0/0:14,0:14:15.05:0,15,330	1/1:16,1:17:3.01:60,3,0	1/1:16,0:16:2.99:23,3,0	0/1:17,0:18:13.15:35,0,13	./.	0/0:60,0:61:26.76:0,27,333	./.	1/1:7,0:7:2.22:7,2,0	1/1:32,0:32:2.99:25,3,0	0/0:12,0:12:2.99:0,3,23	0/0:25,0:25:12.02:0,12,210	0/0:13,0:13:12.04:0,12,159	0/0:4,0:4:3.01:0,3,71
chr10	103191115	.	A	ATTGGTTGG	6993.72	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-8.211;DP=580;FS=1.194;HRun=0;HaplotypeScore=126.3913;InbreedingCoeff=0.9336;MQ=56.89;MQ0=15;MQRankSum=-8.742;QD=28.66;ReadPosRankSum=-1.723;VQSLOD=4.0654;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,2:15:15.94:469,16,0	1/1:4,6:11:15.05:611,15,0	0/0:42,0:17:9.03:0,9,192	0/0:35,0:21:18.05:0,18,312	0/0:14,0:14:24.06:0,24,499	1/1:9,10:21:9.03:369,9,0	1/1:15,6:21:6.02:154,6,0	0/0:21,0:29:18.10:0,18,169	1/1:7,9:16:12.04:480,12,0	0/0:16,0:16:15.05:0,15,354	0/0:15,0:15:24.08:0,24,550	0/0:18,0:18:27.09:0,27,660	1/1:7,11:19:21.07:856,21,0	1/1:11,14:26:27.09:1105,27,0	0/0:11,0:22:18.01:0,18,299	0/0:19,0:19:48.15:0,48,1079	1/1:15,10:26:12.04:404,12,0	1/1:18,1:19:17.62:563,18,0	0/0:16,0:20:15.04:0,15,250	0/0:10,0:20:24.08:0,24,426	0/0:3,0:16:21.07:0,21,369	1/1:5,10:18:15.05:554,15,0	1/1:10,0:10:11.96:218,12,0	1/1:8,9:17:12.04:410,12,0	1/1:10,9:22:21.07:801,21,0	0/0:29,0:29:42.14:0,42,983	0/0:6,0:29:53.34:0,53,843	0/0:8,0:7:18.04:0,18,400
chr10	103191248	.	CACACACAA	C	637.13	PASS	AB=0.914;AC=5;AF=0.089;AN=56;BaseQRankSum=0.642;DP=794;FS=12.941;HRun=0;HaplotypeScore=191.1882;InbreedingCoeff=-0.0078;MQ=53.41;MQ0=36;MQRankSum=-0.555;QD=4.30;ReadPosRankSum=-2.345;VQSLOD=1.5953;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:46:83.90:0,84,1877	0/0:9,0:8:21.05:0,21,502	0/0:45,0:12:18.43:0,18,131	0/0:64,0:13:30.83:0,31,281	0/0:31,0:31:87.22:0,87,2601	0/0:17,0:16:24.18:0,24,1042	0/0:26,0:26:45.12:0,45,1120	0/0:22,0:21:43.71:0,44,828	0/1:17,0:15:29.89:30,0,804	0/0:24,0:22:54.18:0,54,1726	0/0:17,0:17:44.89:0,45,1045	0/0:28,0:28:70.06:0,70,1823	0/1:25,0:25:26.09:26,0,1185	0/1:33,0:32:16.46:16,0,1986	0/1:7,21:24:4.38:596,0,4	0/0:19,0:19:51.16:0,51,1881	0/0:38,0:38:14.39:0,14,2366	0/0:36,0:34:11.30:0,11,1739	0/0:17,0:14:32.80:0,33,580	0/0:26,0:26:78.07:0,78,2295	0/0:37,0:36:99:0,99,2773	0/0:28,0:28:5.39:0,5,1843	0/0:25,0:24:54.60:0,55,1571	0/1:45,0:43:85.40:85,0,1972	0/0:23,0:23:11.13:0,11,969	0/0:28,0:26:72.14:0,72,1837	0/0:24,0:24:72.21:0,72,2197	0/0:12,0:12:29.81:0,30,744
chr10	103191937	.	CA	C	5783.22	PASS	AB=0.875;AC=37;AF=0.685;AN=54;BaseQRankSum=5.708;DP=491;FS=3.677;HRun=11;HaplotypeScore=55.5810;InbreedingCoeff=0.8597;MQ=62.67;MQ0=8;MQRankSum=0.368;QD=16.29;ReadPosRankSum=2.306;VQSLOD=5.8725;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,28:37:75.96:603,76,0	1/1:2,3:5:8.99:74,9,0	0/0:7,0:6:9.44:0,9,77	0/0:9,0:8:6.47:0,6,57	0/0:17,1:20:26.33:0,26,469	1/1:2,9:11:26.96:222,27,0	1/1:3,15:16:38.95:320,39,0	1/1:3,17:20:47.92:394,48,0	1/1:1,10:10:20.96:172,21,0	0/1:12,2:14:13.09:13,0,283	0/0:3,0:3:9.02:0,9,96	0/0:19,0:19:51.13:0,51,543	1/1:4,11:14:26.95:222,27,0	1/1:1,11:12:29.97:246,30,0	./.	0/0:21,0:21:57.10:0,57,584	1/1:1,26:27:74.91:616,75,0	1/1:9,14:21:22.48:258,22,0	1/1:6,20:25:7.88:406,8,0	1/1:1,15:16:38.94:319,39,0	1/1:1,20:21:53.94:443,54,0	1/1:6,10:15:23.94:197,24,0	1/1:5,12:17:26.96:222,27,0	1/1:3,18:21:47.94:394,48,0	1/1:4,16:19:35.94:296,36,0	0/0:29,0:28:58.96:0,59,613	1/1:4,17:21:44.93:368,45,0	0/0:28,0:27:47.82:0,48,711
chr10	103192217	.	TG	T	645.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.444;DP=635;FS=0.821;HRun=2;HaplotypeScore=66.9415;InbreedingCoeff=0.9974;MQ=84.36;MQ0=1;MQRankSum=-0.212;QD=30.72;ReadPosRankSum=1.602;VQSLOD=3.2907;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1613	0/0:12,0:12:36.09:0,36,497	0/0:31,1:30:51.46:0,51,1124	0/0:39,1:35:69.02:0,69,910	0/0:16,0:16:48.16:0,48,717	0/0:14,0:14:42.14:0,42,627	0/0:44,0:44:99:0,132,1977	0/0:21,0:21:63.20:0,63,922	0/0:19,0:19:54.18:0,54,809	0/0:15,0:15:45.14:0,45,641	0/0:8,0:8:24.08:0,24,358	0/0:35,0:35:99:0,105,1552	0/0:22,0:22:66.21:0,66,958	0/0:13,0:13:39.12:0,39,560	1/1:0,21:21:57.19:740,57,0	0/0:29,0:29:87.28:0,87,1283	0/0:35,0:34:99:0,99,1465	0/0:23,0:23:69.15:0,69,984	0/0:23,0:23:63.21:0,63,941	0/0:15,0:15:42.14:0,42,619	0/0:29,0:29:81.26:0,81,1193	0/0:16,0:16:48.14:0,48,689	0/0:13,0:13:33.11:0,33,492	0/0:29,0:29:81.26:0,81,1192	0/0:16,0:16:48.16:0,48,719	0/0:25,0:25:75.24:0,75,1086	0/0:20,0:19:57.16:0,57,813	0/0:14,0:14:42.14:0,42,613
chr10	103193084	.	TGTGCATGC	T	784.52	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.532;DP=1012;FS=2.187;HRun=0;HaplotypeScore=258.1752;InbreedingCoeff=0.9989;MQ=71.51;MQ0=3;MQRankSum=-3.812;QD=34.11;ReadPosRankSum=-0.578;VQSLOD=3.2031;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:68,0:68:99:0,192,7041	0/0:11,0:11:30.09:0,30,1048	0/0:39,0:30:33.08:0,33,1179	0/0:54,0:37:82.83:0,83,1897	0/0:23,0:23:69.24:0,69,2481	0/0:24,0:24:66.23:0,66,2375	0/0:43,0:43:99:0,111,3818	0/0:40,0:40:99:0,114,3454	0/0:29,0:29:84.29:0,84,3543	0/0:46,0:46:99:0,138,5445	0/0:14,0:14:39.13:0,39,1423	0/0:50,0:50:99:0,144,5531	0/0:40,0:40:99:0,114,4138	0/0:41,0:41:99:0,117,4150	1/1:11,12:23:33.11:879,33,0	0/0:40,0:40:99:0,120,4277	0/0:47,0:47:99:0,126,4684	0/0:30,0:30:84.29:0,84,3082	0/0:47,0:47:99:0,129,3788	0/0:25,0:25:75.23:0,75,2513	0/0:102,0:102:99:0,292,10988	0/0:22,0:22:57.19:0,57,1951	0/0:22,0:22:66.23:0,66,2325	0/0:36,0:35:99:0,99,3777	0/0:22,0:22:63.22:0,63,2550	0/0:31,0:31:93.32:0,93,3708	0/0:20,0:20:60.21:0,60,1994	0/0:22,0:22:60.20:0,60,2512
chr10	103193134	.	C	CATGT	1726.65	PASS	AB=0.989;AC=4;AF=0.071;AN=56;BaseQRankSum=4.425;DP=1060;FS=4.761;HRun=0;HaplotypeScore=231.1484;InbreedingCoeff=0.4420;MQ=62.27;MQ0=11;MQRankSum=-4.441;QD=16.29;ReadPosRankSum=-8.224;VQSLOD=1.0769;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:64:99:0,183,3423	0/0:8,0:8:23.97:0,24,360	0/0:56,0:39:51.78:0,52,1434	0/0:85,0:55:99:0,118,1871	0/0:26,0:26:75.26:0,75,1524	0/0:16,0:16:45.12:0,45,850	0/0:49,0:49:99:0,136,2649	0/1:42,0:43:77.98:78,0,661	0/0:25,0:25:72.10:0,72,1247	0/0:42,0:42:99:0,121,2222	0/0:14,0:14:42.09:0,42,797	0/0:46,0:46:99:0,138,2742	0/0:39,0:39:99:0,114,2285	0/0:37,0:37:99:0,105,1976	1/1:9,36:45:85.51:1731,86,0	0/0:36,0:36:99:0,102,2032	0/0:54,0:54:99:0,150,2916	0/0:33,0:33:99:0,99,1896	0/1:18,0:17:32.99:33,0,295	0/0:19,0:19:8.09:0,8,447	0/0:119,0:119:99:0,149,2781	0/0:20,0:20:57.11:0,57,1096	0/0:23,0:23:69.19:0,69,1372	0/0:40,0:39:99:0,117,2243	0/0:24,0:24:72.21:0,72,1397	0/0:33,0:33:96.28:0,96,1888	0/0:29,0:29:35.12:0,35,710	0/0:15,0:15:45.03:0,45,806
chr10	103193224	.	G	GTGTGTC	226.95	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.843;DP=944;FS=5.133;HRun=0;HaplotypeScore=215.6485;InbreedingCoeff=0.9654;MQ=66.23;MQ0=11;MQRankSum=-0.982;QD=6.48;ReadPosRankSum=-3.314;VQSLOD=1.6468;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,120,2422	0/0:14,0:14:39.10:0,39,736	0/0:53,0:26:43.85:0,44,700	0/0:54,0:35:58.37:0,58,1076	0/0:37,0:37:99:0,108,2310	0/0:23,0:23:60.10:0,60,1144	0/0:27,0:27:75.08:0,75,1510	0/0:42,0:42:99:0,101,1715	0/0:38,0:38:99:0,111,2218	0/0:50,0:50:99:0,144,3020	0/0:27,0:27:69.08:0,69,1381	0/0:28,0:28:81.20:0,81,1642	0/0:36,0:36:99:0,102,2002	0/0:39,0:39:99:0,108,2178	1/1:21,14:35:11.88:313,12,0	0/0:38,0:38:99:0,105,2142	0/0:38,0:38:99:0,107,2032	0/0:28,0:28:84.27:0,84,1720	0/0:28,0:27:72.17:0,72,1119	0/0:27,0:27:75.17:0,75,1434	0/0:58,0:58:99:0,150,2926	0/0:30,0:30:90.22:0,90,1755	0/0:25,0:25:66.98:0,67,1289	0/0:36,0:36:99:0,105,1934	0/0:26,0:26:75.25:0,75,1638	0/0:31,0:31:84.24:0,84,1761	0/0:22,0:22:66.13:0,66,1274	0/0:8,0:8:24.06:0,24,484
chr10	103193300	.	TGAGA	T	1060.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.860;DP=714;FS=3.000;HRun=0;HaplotypeScore=117.1325;InbreedingCoeff=0.9423;MQ=67.48;MQ0=0;MQRankSum=-3.676;QD=34.21;ReadPosRankSum=1.243;VQSLOD=3.9143;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,2457	0/0:18,0:19:47.95:0,48,1157	0/0:17,0:13:23.86:0,24,435	0/0:20,0:18:29.58:0,30,641	0/0:30,0:30:81.23:0,81,1902	0/0:11,0:11:30.10:0,30,763	0/0:28,0:28:72.25:0,72,1792	0/0:26,0:26:54.16:0,54,1209	0/0:23,0:23:60.21:0,60,1523	0/0:42,0:42:99:0,105,2545	0/0:28,0:28:81.27:0,81,2007	0/0:25,0:25:72.24:0,72,1781	0/0:34,0:34:93.32:0,93,2366	0/0:19,0:19:48.16:0,48,1214	1/1:6,25:31:66.23:1155,66,0	0/0:23,0:23:63.22:0,63,1576	0/0:36,0:36:84.29:0,84,2131	0/0:33,0:33:93.30:0,93,2314	0/0:17,0:17:39.13:0,39,944	0/0:34,0:34:93.28:0,93,2202	0/0:22,0:22:60.21:0,60,1521	0/0:17,0:17:45.13:0,45,1008	0/0:31,0:31:81.25:0,81,1957	0/0:28,0:28:75.26:0,75,1896	0/0:34,0:34:87.30:0,87,2208	0/0:28,0:28:75.26:0,75,1904	0/0:18,0:18:54.19:0,54,1353	0/0:3,0:3:9.03:0,9,229
chr10	103193399	.	T	TTG	1071.86	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.950;DP=581;FS=4.100;HRun=0;HaplotypeScore=71.3622;InbreedingCoeff=0.9978;MQ=71.59;MQ0=0;MQRankSum=-2.291;QD=41.23;ReadPosRankSum=0.630;VQSLOD=4.9777;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.29:0,93,1278	0/0:14,0:14:33.11:0,33,461	0/0:12,0:12:30.10:0,30,400	0/0:17,0:17:43.39:0,43,582	0/0:22,0:22:63.20:0,63,865	0/0:16,0:16:45.15:0,45,629	0/0:22,0:22:60.19:0,60,821	0/0:34,0:34:90.29:0,90,1231	0/0:21,0:21:60.20:0,60,840	0/0:24,0:24:66.22:0,66,917	0/0:17,0:17:45.15:0,45,629	0/0:22,0:22:63.21:0,63,878	0/0:16,0:16:48.16:0,48,670	0/0:14,0:14:42.14:0,42,587	1/1:8,18:26:66.23:1167,66,0	0/0:13,0:13:39.12:0,39,529	0/0:25,0:25:75.25:0,75,1046	0/0:24,0:24:54.17:0,54,736	0/0:18,0:18:51.17:0,51,714	0/0:37,0:37:99:0,111,1553	0/0:11,0:11:27.07:0,27,360	0/0:14,0:14:36.12:0,36,504	0/0:18,0:18:42.13:0,42,570	0/0:14,0:14:39.12:0,39,526	0/0:26,0:26:75.25:0,75,1049	0/0:22,0:22:57.19:0,57,798	0/0:32,0:32:93.31:0,93,1293	0/0:18,0:18:54.18:0,54,755
chr10	103198975	.	CTGTT	C	9096.34	PASS	AB=0.945;AC=29;AF=0.518;AN=56;BaseQRankSum=10.063;DP=720;FS=1.162;HRun=0;HaplotypeScore=124.0819;InbreedingCoeff=0.7921;MQ=69.72;MQ0=2;MQRankSum=1.774;QD=22.13;ReadPosRankSum=1.481;VQSLOD=4.4116;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,24:35:66.22:1047,66,0	1/1:5,9:14:18.06:286,18,0	0/0:27,0:21:9.03:0,9,185	0/0:24,0:21:23.96:0,24,416	0/0:24,0:24:42.14:0,42,973	1/1:14,19:33:54.18:857,54,0	1/1:12,11:23:30.06:476,30,0	0/0:23,0:23:18.05:0,18,323	1/1:6,23:29:51.17:810,51,0	0/0:17,0:33:57.18:0,57,965	0/0:20,0:20:45.14:0,45,1022	0/0:23,0:23:48.16:0,48,1109	1/1:8,16:24:42.14:667,42,0	1/1:11,14:25:39.13:611,39,0	0/0:23,0:23:36.12:0,36,589	0/0:28,1:29:9.56:0,10,1176	1/1:10,16:26:45.15:714,45,0	1/1:13,10:23:12.12:411,12,0	0/0:22,0:22:33.10:0,33,740	0/1:22,1:23:2.48:2,0,942	0/1:24,2:26:5.52:6,0,792	1/1:12,19:31:57.15:869,57,0	1/1:4,17:21:41.20:665,41,0	1/1:8,16:24:39.13:619,39,0	1/1:12,24:36:66.23:1048,66,0	0/0:25,1:26:3.54:0,4,1047	0/0:34,0:35:87.28:0,87,2004	0/1:17,1:18:8.49:8,0,818
chr10	103198982	.	T	TTTGC	1386.79	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.774;DP=725;FS=10.179;HRun=0;HaplotypeScore=155.7423;InbreedingCoeff=0.6477;MQ=65.52;MQ0=4;MQRankSum=0.460;QD=25.21;ReadPosRankSum=1.418;VQSLOD=2.8545;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:96.16:0,96,1004	0/0:17,0:17:41.91:0,42,393	0/0:24,0:18:42.04:0,42,424	0/0:26,0:20:49.69:0,50,615	0/0:25,0:25:66.08:0,66,936	0/0:28,0:28:81.13:0,81,843	0/0:20,0:20:54.05:0,54,547	0/0:22,0:22:62.98:0,63,648	0/0:28,0:28:66.13:0,66,708	0/1:31,0:31:99:508,0,256	0/0:22,0:22:66.12:0,66,946	0/0:23,0:23:69.09:0,69,1045	0/0:22,0:22:57.02:0,57,615	0/0:27,0:27:72.05:0,72,710	1/1:1,23:24:39.03:985,39,0	0/0:29,0:29:84.18:0,84,1230	0/0:26,0:26:68.84:0,69,710	0/0:24,0:24:56.93:0,57,541	0/0:20,0:20:59.90:0,60,784	0/0:29,0:29:69.14:0,69,1024	0/0:26,0:26:72.58:0,73,971	0/0:32,0:31:86.77:0,87,871	0/0:23,0:23:55.13:0,55,573	0/0:22,0:22:57.09:0,57,597	0/0:37,0:37:99:0,99,1032	0/0:23,0:23:69.16:0,69,1034	0/0:37,0:37:65.22:0,65,1605	0/0:23,0:23:66.03:0,66,810
chr10	103203724	.	GTT	G	3733.86	PASS	AB=0.640;AC=25;AF=0.446;AN=56;BaseQRankSum=-1.958;DP=510;FS=0.865;HRun=15;HaplotypeScore=109.4496;InbreedingCoeff=0.9079;MQ=66.43;MQ0=7;MQRankSum=-1.186;QD=17.45;ReadPosRankSum=4.214;VQSLOD=2.9381;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:47.82:422,48,0	1/1:7,6:13:32.84:277,33,0	0/0:46,0:14:17.22:0,17,122	0/0:42,0:16:16.13:0,16,124	0/0:7,0:21:37.35:0,37,199	1/1:12,11:23:35.42:302,35,0	1/1:5,9:13:23.30:194,23,0	0/0:25,0:27:35.05:0,35,392	1/1:2,13:15:35.91:317,36,0	0/0:14,0:19:10.05:0,10,63	0/0:12,0:17:32.78:0,33,216	0/0:4,0:6:13.13:0,13,52	1/1:7,4:11:14.87:127,15,0	1/1:4,6:10:20.75:182,21,0	0/0:15,0:15:10.38:0,10,213	0/0:5,0:6:11.49:0,11,108	1/1:5,19:24:59.84:526,60,0	1/1:6,16:21:41.70:375,42,0	0/0:17,0:17:37.61:0,38,320	0/0:17,0:17:38.89:0,39,362	0/0:7,0:7:10.72:0,11,79	1/1:1,13:14:38.03:323,38,0	0/1:7,9:16:6.52:226,0,7	1/1:3,11:14:24.82:213,25,0	1/1:6,12:18:29.80:251,30,0	0/0:14,0:23:47.75:0,48,291	0/0:17,0:20:49.71:0,50,448	0/0:5,0:10:24.47:0,24,183
chr10	103203725	.	T	TG	1560.06	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-0.108;DP=521;FS=0.932;HRun=3;HaplotypeScore=120.7436;InbreedingCoeff=0.9208;MQ=63.94;MQ0=7;MQRankSum=-5.798;QD=14.58;ReadPosRankSum=-1.976;VQSLOD=2.4425;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:53.94:0,54,452	0/0:13,0:13:35.66:0,36,280	0/0:48,0:14:18.02:0,18,184	0/0:44,0:14:4.31:0,4,155	0/0:24,0:23:56.85:0,57,471	0/0:23,0:23:41.62:0,42,387	0/0:14,0:13:34.96:0,35,278	1/1:28,0:27:52.44:352,52,0	0/0:15,0:15:38.96:0,39,326	0/0:19,0:19:48.03:0,48,439	0/0:16,0:16:23.54:0,24,338	0/0:7,0:7:17.98:0,18,150	0/0:10,0:10:23.93:0,24,194	0/0:10,0:10:22.01:0,22,219	1/1:5,10:15:38.76:307,39,0	0/0:10,0:10:14.83:0,15,160	0/0:24,0:24:68.52:0,69,561	0/0:22,0:21:53.95:0,54,456	1/1:15,4:18:14.10:265,14,0	1/1:10,7:17:23.07:346,23,0	1/1:6,1:7:2.90:45,3,0	0/0:15,0:15:38.96:0,39,325	0/0:16,0:16:44.97:0,45,385	0/0:14,0:14:32.95:0,33,274	0/0:17,0:17:32.89:0,33,301	0/0:23,0:23:44.44:0,44,525	1/1:16,5:21:20.33:424,20,0	0/0:10,0:10:23.96:0,24,221
chr10	103203735	.	T	TG	1544.84	PASS	AB=0.982;AC=25;AF=0.446;AN=56;BaseQRankSum=2.624;DP=577;FS=9.732;HRun=0;HaplotypeScore=117.1691;InbreedingCoeff=-0.0055;MQ=54.38;MQ0=18;MQRankSum=-3.723;QD=4.00;ReadPosRankSum=3.347;VQSLOD=2.7155;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:13.30:145,13,0	0/1:14,0:14:27.73:47,0,28	0/0:73,0:15:11.41:0,11,147	0/1:55,0:10:2.25:2,0,117	0/0:30,0:28:72.98:0,73,588	0/1:20,0:20:47.52:55,0,48	0/1:13,0:12:1.53:46,0,2	0/1:29,0:28:99:109,0,324	0/1:20,0:20:1.77:80,0,2	0/0:13,0:13:35.86:0,36,287	0/0:18,0:18:53.88:0,54,482	0/0:9,0:9:26.87:0,27,209	0/1:11,0:11:16.78:35,0,17	0/1:9,0:9:16.15:16,0,17	1/1:7,10:16:44.29:294,44,0	0/0:11,0:11:29.79:0,30,286	1/1:27,0:26:12.84:139,13,0	0/1:23,0:23:26.34:106,0,26	0/1:18,0:18:54.88:158,0,55	0/1:14,0:15:68.69:69,0,95	0/1:6,0:7:32.46:32,0,34	1/1:21,0:21:36.15:145,36,0	0/1:14,0:14:8.52:93,0,9	0/1:16,0:14:13.15:43,0,13	1/1:15,0:15:5.65:82,6,0	0/0:25,0:25:71.79:0,72,621	0/1:19,0:19:25.93:26,0,73	0/0:12,0:12:29.90:0,30,261
chr10	103203738	.	TTG	T	907.42	PASS	AB=0.991;AC=23;AF=0.411;AN=56;BaseQRankSum=5.057;DP=587;FS=9.329;HRun=0;HaplotypeScore=124.3993;InbreedingCoeff=-0.2343;MQ=53.02;MQ0=22;MQRankSum=-0.146;QD=2.06;ReadPosRankSum=3.287;VQSLOD=1.5750;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:17.46:59,0,17	1/1:13,1:14:7.29:163,7,0	0/1:76,1:14:18.62:19,0,73	0/1:58,0:11:32.69:33,0,89	0/1:30,0:28:28.96:29,0,194	1/1:17,2:19:7.13:150,7,0	0/1:13,0:12:18.03:38,0,18	0/0:31,0:29:24.52:0,25,558	0/1:19,1:20:25.43:73,0,25	0/1:12,0:12:23.23:23,0,61	0/1:17,0:17:0.67:1,0,220	0/1:9,0:9:3.76:4,0,52	0/1:9,0:9:12.22:12,0,28	1/1:7,1:8:14.62:82,15,0	0/0:17,0:16:35.06:0,35,363	0/1:12,0:12:27.88:28,0,65	0/1:26,1:26:15.35:118,0,15	0/1:23,0:22:36.01:48,0,36	0/0:20,0:19:41.93:0,42,372	0/0:15,0:15:32.67:0,33,392	0/0:7,0:7:11.71:0,12,110	0/1:22,0:22:34.52:35,0,40	0/1:16,0:16:28.81:29,0,55	0/1:17,0:15:29.17:34,0,29	0/1:14,1:15:12.42:100,0,12	0/0:25,0:25:31.31:0,31,302	0/0:20,0:20:18.46:0,18,295	0/0:12,0:12:17.22:0,17,187
chr10	103205094	.	CATGTGTGTGTGTGT	C	4281.74	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=2.970;DP=526;FS=3.497;HRun=0;HaplotypeScore=183.0765;InbreedingCoeff=0.6875;MQ=73.08;MQ0=12;MQRankSum=-2.126;QD=14.82;ReadPosRankSum=5.146;VQSLOD=3.3370;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:56.57:408,57,0	1/1:4,0:4:8.90:62,9,0	0/0:30,0:23:48.37:0,48,543	0/0:28,0:20:38.34:0,38,392	0/0:14,0:13:33:0,33,783	1/1:1,16:16:5.77:184,6,0	1/1:16,0:15:35.81:314,36,0	0/0:27,0:25:68.79:0,69,591	1/1:2,10:11:5.77:258,6,0	0/0:14,0:14:32.98:0,33,402	0/0:8,0:8:21:0,21,433	0/0:20,0:20:53.27:0,53,1434	1/1:0,16:16:2.16:129,2,0	1/1:18,0:19:47.67:481,48,0	0/1:27,0:27:99:420,0,258	0/0:21,0:21:60:0,60,1195	1/1:22,0:21:50.22:348,50,0	1/1:2,0:12:3.01:73,3,0	0/1:18,0:18:36.05:36,0,284	0/0:8,0:7:8.99:0,9,75	0/0:37,0:37:56.93:0,57,596	1/1:18,2:20:38.80:394,39,0	1/1:10,0:8:20.87:156,21,0	1/1:30,0:30:64.87:486,65,0	1/1:20,0:20:46.69:418,47,0	0/0:17,0:17:50.95:0,51,559	0/1:18,0:18:99:115,0,237	0/0:13,0:12:32.94:0,33,588
chr10	103205095	.	ATGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	A	1893.41	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=4.936;DP=542;FS=8.765;HRun=0;HaplotypeScore=337.9401;InbreedingCoeff=0.5731;MQ=69.68;MQ0=12;MQRankSum=-2.977;QD=21.52;ReadPosRankSum=0.920;VQSLOD=0.9814;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:31.92:0,32,1623	0/0:4,0:4:3.01:0,3,184	0/0:29,0:22:6.02:0,6,172	0/0:26,0:18:3.01:0,3,72	0/0:17,0:16:18.06:0,18,1864	0/0:18,0:17:6.02:0,6,304	0/0:17,0:16:12.04:0,12,570	0/1:26,0:24:0.49:4,0,0	0/0:12,0:11:6.02:0,6,230	0/0:18,0:18:29.57:0,30,1670	0/0:6,0:8:9.03:0,9,865	0/0:19,0:19:27.09:0,27,2782	0/0:17,0:17:6.11:0,6,123	0/0:20,0:19:24.08:0,24,1211	1/1:20,7:27:18.06:1374,18,0	0/0:22,0:22:33.11:0,33,2758	0/0:23,0:22:25.90:0,26,1227	0/0:16,0:14:9.03:0,9,313	1/1:16,0:18:5.69:220,6,0	./.	0/0:37,0:37:0.77:0,1,311	0/0:20,0:20:12.04:0,12,602	0/0:11,0:9:12.03:0,12,521	0/0:30,0:30:51.17:0,51,2812	0/0:20,0:20:23.82:0,24,1017	0/0:19,0:19:21.02:0,21,1187	1/1:14,0:17:6.02:419,6,0	0/0:14,0:14:15.05:0,15,1404
chr10	103208457	.	CAAA	C	2587.99	PASS	AB=0.818;AC=24;AF=0.429;AN=56;BaseQRankSum=4.541;DP=465;FS=28.104;HRun=20;HaplotypeScore=115.8319;InbreedingCoeff=0.7932;MQ=59.58;MQ0=11;MQRankSum=-3.074;QD=13.14;ReadPosRankSum=7.535;VQSLOD=-0.4995;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,4:18:17.07:100,0,17	1/1:2,9:11:23.68:220,24,0	0/0:35,0:13:14.32:0,14,87	0/0:28,0:12:1.72:0,2,5	0/0:21,0:23:30.50:0,30,378	1/1:5,13:17:32.28:304,32,0	1/1:6,10:16:20.03:193,20,0	0/0:21,0:20:33.14:0,33,207	1/1:6,16:23:34.47:392,34,0	0/0:13,0:14:21.03:0,21,236	0/0:16,0:16:25.17:0,25,257	0/0:7,0:7:15:0,15,181	1/1:2,5:7:14.71:138,15,0	1/1:8,5:13:17.27:156,17,0	0/0:16,0:17:39:0,39,408	0/0:16,1:18:13.73:0,14,420	0/1:13,4:16:12.90:142,0,13	1/1:11,6:17:26.01:237,26,0	0/0:15,0:14:21.40:0,21,154	0/0:12,0:12:17.55:0,18,111	0/0:4,0:4:0:0,0,1	1/1:3,13:16:35.93:331,36,0	1/1:4,8:12:20.49:191,20,0	1/1:5,6:11:14.13:137,14,0	1/1:6,11:16:28.85:263,29,0	0/0:15,0:15:27.74:0,28,257	0/0:23,0:24:31.10:0,31,418	0/0:14,0:15:24.85:0,25,274
chr10	103208495	.	CAA	C	141.75	PASS	AB=0.925;AC=5;AF=0.089;AN=56;BaseQRankSum=1.098;DP=540;FS=0.000;HRun=9;HaplotypeScore=163.5770;InbreedingCoeff=0.2603;MQ=44.42;MQ0=19;MQRankSum=-5.240;QD=1.89;ReadPosRankSum=-3.706;VQSLOD=-0.5532;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:45.53:0,46,315	0/0:6,0:6:8.98:0,9,74	0/0:32,0:11:12.20:0,12,293	0/0:27,0:9:20.88:0,21,271	0/0:19,0:18:38.73:0,39,557	0/0:22,0:22:41.16:0,41,342	0/0:18,0:17:29.10:0,29,225	0/1:31,2:32:34.65:88,0,35	0/0:19,0:18:36.96:0,37,284	0/0:30,0:29:79.70:0,80,1181	0/0:12,0:12:27.05:0,27,397	0/0:5,0:5:15.05:0,15,237	0/0:15,0:15:36.71:0,37,265	0/0:18,0:17:30.76:0,31,249	0/0:22,0:22:37.59:0,38,361	0/0:20,0:18:48.94:0,49,702	0/0:22,0:21:31.25:0,31,259	0/0:19,0:19:21.28:0,21,177	0/1:21,1:16:36.98:51,0,37	0/1:12,2:13:58.61:65,0,59	1/1:5,1:6:6.77:53,7,0	0/0:20,0:21:30.41:0,30,293	0/0:16,0:17:27.78:0,28,216	0/0:16,0:15:28.07:0,28,200	0/0:17,0:15:28.41:0,28,246	0/0:28,0:25:66.20:0,66,1020	0/0:23,0:23:27.65:0,28,208	0/0:13,0:14:31.62:0,32,432
chr10	103208496	.	A	AAAC	10476.07	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=8.833;DP=547;FS=1.239;HRun=0;HaplotypeScore=146.7153;InbreedingCoeff=0.7366;MQ=47.15;MQ0=19;MQRankSum=-9.465;QD=27.64;ReadPosRankSum=1.821;VQSLOD=5.2434;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:20:36.18:717,36,0	1/1:5,0:5:9.02:148,9,0	0/0:34,0:12:13.72:0,14,283	0/0:28,0:10:18.17:0,18,193	0/0:19,0:18:44.95:0,45,608	1/1:21,1:22:62.64:936,63,0	1/1:18,0:17:38.77:619,39,0	1/1:34,0:33:29.84:771,30,0	1/1:19,0:18:40.52:736,41,0	0/0:30,0:29:80.11:0,80,1218	0/0:12,0:12:27.05:0,27,394	0/0:5,0:5:15.05:0,15,244	1/1:15,0:15:41.64:646,42,0	1/1:18,2:20:35.50:696,35,0	0/1:22,0:22:12.56:13,0,118	0/1:21,0:19:12.90:13,0,643	1/1:17,5:22:31.89:670,32,0	1/1:19,0:19:50.99:700,51,0	1/1:23,0:17:18.95:208,19,0	1/1:14,0:13:22.38:304,22,0	1/1:6,0:6:17.86:178,18,0	1/1:21,0:21:51.06:891,51,0	1/1:17,0:17:48.03:768,48,0	1/1:16,0:15:32.60:502,33,0	1/1:16,0:15:36:632,36,0	0/0:27,0:25:69.20:0,69,1082	0/1:25,0:25:45.44:329,0,45	0/0:12,0:12:6.88:0,7,415
chr10	103208498	.	A	AC	4066.15	PASS	AB=0.926;AC=32;AF=0.571;AN=56;BaseQRankSum=10.985;DP=534;FS=1.630;HRun=0;HaplotypeScore=141.3012;InbreedingCoeff=0.6421;MQ=47.98;MQ0=19;MQRankSum=-10.437;QD=11.85;ReadPosRankSum=4.289;VQSLOD=4.5991;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,12:20:22.06:277,22,0	1/1:1,2:3:8.99:75,9,0	0/0:33,0:12:24.96:0,25,284	0/0:30,0:11:23.14:0,23,258	0/0:19,0:18:48.02:0,48,580	1/1:12,9:21:53.65:380,54,0	1/1:8,8:15:35.34:259,35,0	0/1:32,0:31:5.81:319,0,6	1/1:8,9:16:14.56:283,15,0	0/0:30,0:29:83.60:0,84,1064	0/0:10,0:10:30.02:0,30,375	0/0:5,0:5:15.05:0,15,203	1/1:7,9:16:30.29:205,30,0	1/1:12,8:19:13.48:211,13,0	0/1:21,0:21:20.97:21,0,107	0/0:20,1:19:29.57:0,30,621	1/1:10,11:21:19:321,19,0	1/1:13,6:19:46.10:302,46,0	0/1:23,0:17:0.62:114,0,1	0/1:12,2:13:2.85:86,0,3	1/1:5,1:6:17.67:117,18,0	1/1:9,9:18:31.88:351,32,0	1/1:8,9:17:39.08:279,39,0	1/1:11,5:15:17.17:184,17,0	0/1:8,7:14:1.64:266,0,2	0/0:31,0:28:72.19:0,72,933	0/1:26,0:26:17.24:17,0,184	0/0:12,0:12:34.82:0,35,408
chr10	103208502	.	AAAC	A	2083.91	PASS	AB=0.930;AC=23;AF=0.411;AN=56;BaseQRankSum=1.693;DP=540;FS=2.215;HRun=0;HaplotypeScore=163.4564;InbreedingCoeff=-0.0128;MQ=49.47;MQ0=15;MQRankSum=-2.423;QD=6.02;ReadPosRankSum=-8.790;VQSLOD=0.2910;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:22:7.26:7,0,46	0/0:3,0:3:4.69:0,5,16	0/0:33,0:13:23.56:0,24,393	0/0:31,0:12:0.97:0,1,309	0/0:17,0:17:47.65:0,48,752	0/1:20,2:22:30.96:158,0,31	0/1:13,4:16:16.07:118,0,16	1/1:31,0:30:66.46:434,66,0	0/1:16,1:16:32.97:33,0,39	0/0:32,0:31:76.13:0,76,1440	0/0:10,0:10:26.09:0,26,452	0/0:5,0:5:15.04:0,15,240	0/1:16,0:16:31.25:31,0,47	0/1:18,3:20:36.55:37,0,56	0/1:23,0:23:73.25:94,0,73	0/0:21,0:19:36.05:0,36,827	0/1:20,0:20:29.55:99,0,30	1/1:17,2:19:9.92:248,10,0	1/1:20,0:16:15.16:278,15,0	1/1:13,0:12:2.84:62,3,0	1/1:6,0:6:13.24:74,13,0	0/1:17,3:20:5.32:188,0,5	0/1:15,2:17:16.19:172,0,16	0/1:15,2:16:33.54:34,0,40	0/1:14,2:15:22.85:60,0,23	0/0:31,0:28:76.08:0,76,1233	0/1:27,0:27:22.92:134,0,23	0/0:11,0:11:30.93:0,31,488
chr10	103208504	.	AC	A	6316	PASS	AB=0.952;AC=40;AF=0.714;AN=56;BaseQRankSum=14.054;DP=536;FS=11.449;HRun=1;HaplotypeScore=130.3501;InbreedingCoeff=0.8242;MQ=50.40;MQ0=15;MQRankSum=-10.189;QD=16.03;ReadPosRankSum=0.054;VQSLOD=3.8226;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,8:22:42.04:316,42,0	1/1:2,0:2:5.90:36,6,0	0/0:32,0:14:16.12:0,16,281	0/1:25,3:12:6.50:6,0,171	0/0:17,0:17:29.14:0,29,450	1/1:16,5:21:59.08:460,59,0	1/1:15,1:15:37.98:248,38,0	1/1:9,22:30:83.14:795,83,0	1/1:13,3:15:44.19:301,44,0	0/0:33,0:32:43.97:0,44,881	0/0:11,0:11:28.98:0,29,298	0/0:5,0:5:13.27:0,13,135	1/1:11,5:16:41.52:335,42,0	1/1:20,1:20:43.86:275,44,0	1/1:24,0:24:48.37:285,48,0	0/1:23,0:21:9.67:10,0,439	1/1:18,2:20:30.08:285,30,0	1/1:12,7:19:50.51:447,51,0	1/1:15,4:15:42.85:369,43,0	1/1:9,3:11:25.71:213,26,0	1/1:4,2:6:14.82:130,15,0	1/1:16,5:21:56.11:408,56,0	1/1:13,4:17:46.88:377,47,0	1/1:13,3:15:21.61:268,22,0	1/1:11,4:14:41.09:273,41,0	0/0:33,0:30:77.48:0,77,807	1/1:22,5:27:62.98:477,63,0	0/0:11,0:11:23.28:0,23,277
chr10	103208507	.	A	AAC	5094	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=9.001;DP=550;FS=8.715;HRun=0;HaplotypeScore=146.1384;InbreedingCoeff=0.9060;MQ=52.22;MQ0=13;MQRankSum=-8.110;QD=21.22;ReadPosRankSum=7.226;VQSLOD=4.1291;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,12:24:32.10:449,32,0	1/1:0,2:2:6.02:74,6,0	0/0:31,0:15:19.88:0,20,390	0/0:25,0:12:25.13:0,25,294	0/0:18,0:18:51.13:0,51,724	1/1:12,8:21:47.21:511,47,0	1/1:10,8:17:26.19:341,26,0	0/0:33,0:32:54.13:0,54,435	1/1:6,9:14:22.12:413,22,0	0/0:34,0:33:96:0,96,1323	0/0:11,0:11:30.09:0,30,433	0/0:4,0:4:12.03:0,12,163	1/1:6,8:16:22.58:366,23,0	1/1:12,8:20:42.87:412,43,0	0/0:23,0:23:56.68:0,57,512	0/0:22,1:21:26.12:0,26,780	1/1:12,9:22:22.91:425,23,0	1/1:13,5:19:16.18:317,16,0	0/0:21,0:17:48.36:0,48,335	0/0:13,0:12:16.04:0,16,111	0/1:6,0:6:10.86:11,0,22	1/1:13,9:22:50.40:548,50,0	1/1:10,9:19:40.06:408,40,0	1/1:12,5:17:24.49:377,24,0	1/1:8,6:14:38.15:442,38,0	0/0:35,0:32:90.18:0,90,1235	0/0:28,0:28:55.07:0,55,366	0/0:11,0:11:12.97:0,13,395
chr10	103208768	.	CTG	C	1752.29	PASS	AB=0.928;AC=26;AF=0.500;AN=52;BaseQRankSum=3.462;DP=637;FS=1.331;HRun=0;HaplotypeScore=84.4643;InbreedingCoeff=0.5413;MQ=59.22;MQ0=28;MQRankSum=0.235;QD=5.75;ReadPosRankSum=1.327;VQSLOD=2.6141;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,5:26:6.01:65,6,0	1/1:8,0:8:6.01:65,6,0	./.	./.	0/1:20,0:19:37.58:38,0,151	0/1:15,1:27:5.40:5,0,212	0/0:23,0:28:30.06:0,30,364	0/0:24,0:23:4.56:0,5,43	1/1:11,7:17:12.03:130,12,0	0/0:35,0:34:24.08:0,24,350	0/0:14,0:14:3.01:0,3,44	0/0:18,0:20:15.95:0,16,381	1/1:15,6:21:21.05:227,21,0	1/1:12,3:15:11.86:111,12,0	1/1:9,0:19:19.31:83,19,0	0/1:13,1:14:17.36:17,0,163	1/1:18,9:31:38.05:329,38,0	1/1:20,4:25:14.87:144,15,0	0/0:14,0:14:2.90:0,3,16	0/0:17,0:17:2.84:0,3,27	0/0:35,0:30:10.80:0,11,120	0/1:10,3:13:35.40:56,0,35	1/1:12,4:18:14.70:125,15,0	1/1:15,13:27:30.08:324,30,0	1/1:8,9:18:23.73:222,24,0	0/0:21,0:22:12.03:0,12,154	0/0:12,0:16:13.24:0,13,119	0/0:7,0:7:8.99:0,9,92
chr10	103209870	.	TAC	T	417	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.900;DP=605;FS=0.000;HRun=0;HaplotypeScore=100.8310;InbreedingCoeff=0.9659;MQ=69.51;MQ0=0;MQRankSum=-1.298;QD=21.95;ReadPosRankSum=-0.038;VQSLOD=3.9335;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:81.26:0,81,1350	0/0:4,0:4:12.04:0,12,206	0/0:14,0:12:28.64:0,29,413	0/0:22,0:16:30.07:0,30,401	0/0:31,0:30:90.31:0,90,1543	0/0:26,0:26:50.77:0,51,874	0/0:18,0:18:42.09:0,42,638	0/0:39,0:39:99:0,102,1590	0/0:19,0:19:39.09:0,39,589	0/0:29,0:28:78.27:0,78,1335	0/0:33,0:33:90.26:0,90,1462	0/0:17,0:17:48.15:0,48,792	0/0:22,0:22:57.17:0,57,924	0/0:18,0:18:33.11:0,33,566	1/1:6,13:18:39.13:512,39,0	0/0:17,0:17:48.15:0,48,797	0/0:26,0:26:54.17:0,54,893	0/0:26,0:26:66.23:0,66,1131	0/0:20,0:20:54.17:0,54,877	0/0:23,0:23:66.20:0,66,1077	0/0:11,0:11:27.06:0,27,408	0/0:14,0:14:27.09:0,27,463	0/0:20,0:20:45.14:0,45,743	0/0:12,0:12:27.09:0,27,450	0/0:28,0:28:63.20:0,63,1052	0/0:22,0:22:54.18:0,54,919	0/0:19,0:19:51.15:0,51,838	0/0:17,0:17:42.14:0,42,720
chr10	103209894	.	CAT	C	248.10	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=1.432;DP=585;FS=0.000;HRun=0;HaplotypeScore=110.7703;InbreedingCoeff=0.5448;MQ=67.29;MQ0=0;MQRankSum=-1.529;QD=7.30;ReadPosRankSum=-0.453;VQSLOD=2.9610;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:71.11:0,71,718	0/0:6,0:6:18.04:0,18,193	0/0:16,0:12:8.39:0,8,116	0/0:17,0:9:5.50:0,6,42	0/0:34,1:35:49.06:0,49,1230	0/0:29,0:29:53.78:0,54,586	0/0:18,0:18:35.37:0,35,397	0/0:38,0:38:93.27:0,93,1410	0/0:21,0:21:39.11:0,39,436	0/0:35,0:34:93.20:0,93,1335	0/0:29,0:29:78.25:0,78,1266	0/0:14,0:14:36.10:0,36,549	0/0:16,0:16:36.06:0,36,377	0/0:13,0:13:21:0,21,183	1/1:5,14:19:27.07:330,27,0	0/0:17,0:17:42.12:0,42,652	0/0:23,0:24:38.03:0,38,319	0/0:26,0:26:56.98:0,57,580	0/0:17,0:17:36.11:0,36,558	0/0:26,0:26:66.18:0,66,1018	0/0:12,0:12:33.11:0,33,548	0/0:13,0:13:25.11:0,25,231	0/0:23,0:23:44.12:0,44,447	0/0:6,0:6:8.89:0,9,112	0/0:24,0:24:54.12:0,54,578	0/0:21,0:21:63.18:0,63,950	0/0:19,0:19:57.14:0,57,856	0/1:15,0:15:23.59:24,0,261
chr10	103209906	.	T	TAGAG	10051.17	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-10.488;DP=612;FS=6.029;HRun=0;HaplotypeScore=102.1652;InbreedingCoeff=0.8924;MQ=70.75;MQ0=0;MQRankSum=-0.498;QD=34.90;ReadPosRankSum=6.509;VQSLOD=4.3745;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,30:38:54.19:1366,54,0	1/1:1,8:10:15.05:381,15,0	0/0:17,0:15:18.04:0,18,236	0/0:16,0:8:5.63:0,6,55	0/0:31,0:31:75.26:0,75,1275	1/1:4,24:28:46.39:1216,46,0	1/1:5,13:18:27.43:687,27,0	0/0:41,0:41:99:0,102,1725	1/1:1,22:23:39.13:990,39,0	0/0:35,0:34:81.27:0,81,1342	0/0:30,0:30:87.06:0,87,1400	0/0:13,0:13:36.11:0,36,594	1/1:3,17:20:27.09:685,27,0	1/1:0,0:12:21.07:410,21,0	0/0:17,0:17:30.09:0,30,379	0/0:16,0:16:42.13:0,42,700	1/1:1,0:23:36.12:709,36,0	1/1:8,19:27:42.14:1026,42,0	0/0:16,0:16:45.14:0,45,709	0/0:27,0:27:69.22:0,69,1148	0/0:15,0:15:45.14:0,45,734	1/1:2,13:15:15.05:381,15,0	1/1:3,23:26:33.11:837,33,0	1/1:1,3:4:6.02:152,6,0	1/1:4,20:24:45.15:1143,45,0	0/0:27,0:26:66.21:0,66,1107	0/0:23,0:23:57.17:0,57,935	0/1:20,0:20:67.81:68,0,359
chr10	103210213	.	A	ACT	1198.98	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=5.356;DP=746;FS=4.342;HRun=0;HaplotypeScore=110.7393;InbreedingCoeff=0.6488;MQ=92.50;MQ0=0;MQRankSum=-4.362;QD=19.98;ReadPosRankSum=0.886;VQSLOD=4.0536;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.26:0,84,1310	0/0:9,0:9:27.09:0,27,440	0/0:36,0:35:99:0,105,1507	0/0:30,0:30:84.14:0,84,1211	0/0:29,0:29:84.27:0,84,1340	0/0:14,0:14:39.11:0,39,582	0/0:23,0:23:66.18:0,66,1010	0/0:44,0:44:54.28:0,54,582	0/0:32,0:32:96.31:0,96,1521	0/0:39,0:39:99:0,114,1834	0/0:20,0:20:54.13:0,54,784	0/0:35,0:35:99:0,102,1608	0/0:27,0:27:81.28:0,81,1316	0/0:33,0:33:99:0,99,1564	1/1:3,33:36:77.75:1283,78,0	0/0:31,0:31:90.26:0,90,1371	0/0:35,0:35:99:0,105,1628	0/0:19,0:19:54.13:0,54,823	0/1:23,0:24:21.70:22,0,266	0/0:21,0:21:59.56:0,60,431	0/0:38,0:38:96.08:0,96,681	0/0:20,0:20:57.17:0,57,872	0/0:17,0:17:48.12:0,48,684	0/0:26,0:26:78.17:0,78,1184	0/0:17,0:17:51.15:0,51,781	0/0:30,0:30:87.28:0,87,1369	0/0:21,0:21:35.21:0,35,395	0/0:12,0:12:36.12:0,36,583
chr10	103211616	.	TA	T	1167.24	PASS	AB=0.867;AC=11;AF=0.196;AN=56;BaseQRankSum=-0.629;DP=385;FS=0.547;HRun=11;HaplotypeScore=92.9874;InbreedingCoeff=0.6943;MQ=66.28;MQ0=0;MQRankSum=4.414;QD=13.57;ReadPosRankSum=-1.219;VQSLOD=3.5096;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:29.10:0,29,172	0/0:7,0:7:17.67:0,18,124	0/1:10,2:12:35.93:36,0,87	0/0:8,0:6:11.81:0,12,97	0/0:19,0:20:51.12:0,51,538	0/0:17,0:17:28.47:0,28,185	0/0:4,0:4:2.90:0,3,16	1/1:8,18:26:53.53:421,54,0	0/0:14,0:14:29.85:0,30,153	0/0:15,1:16:17.46:0,17,385	0/0:21,0:22:38.24:0,38,365	0/0:11,0:11:32.98:0,33,336	0/0:15,0:15:36.80:0,37,220	0/0:9,0:9:11.73:0,12,88	0/0:4,0:10:16.92:0,17,98	0/0:13,0:14:35.91:0,36,353	0/0:17,0:17:34.43:0,34,229	0/0:6,0:6:1.16:0,1,54	1/1:9,10:20:40.94:320,41,0	1/1:0,14:14:41.97:352,42,0	1/1:0,3:2:5.99:49,6,0	0/0:4,0:4:9.66:0,10,53	0/0:5,0:5:11.71:0,12,79	0/0:11,0:11:17.46:0,17,109	0/0:24,0:24:40.27:0,40,252	0/0:20,2:22:7.83:0,8,479	1/1:1,9:10:2.42:151,2,0	0/0:28,2:30:37.98:0,38,737
chr10	103211626	.	A	AGG	1576.27	PASS	AB=0.985;AC=22;AF=0.393;AN=56;BaseQRankSum=10.668;DP=393;FS=19.273;HRun=0;HaplotypeScore=106.7206;InbreedingCoeff=0.4695;MQ=69.11;MQ0=0;MQRankSum=-6.452;QD=9.98;ReadPosRankSum=3.121;VQSLOD=1.9375;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:16.20:174,16,0	0/1:6,0:6:15.60:16,0,77	0/0:11,0:10:29.86:0,30,308	0/0:10,0:9:27:0,27,344	0/0:20,0:20:54.18:0,54,872	1/1:14,1:15:1.89:234,2,0	1/1:3,0:3:5.81:49,6,0	0/0:26,0:26:42.21:0,42,613	1/1:13,0:13:28:155,28,0	0/0:22,0:22:63.19:0,63,967	0/0:18,0:18:45.62:0,46,685	0/0:13,0:13:39.13:0,39,608	0/1:17,0:17:25.26:226,0,25	1/1:6,1:7:17.56:105,18,0	0/0:11,0:11:20.86:0,21,233	0/0:16,0:16:45.15:0,45,703	1/1:19,1:20:1.80:205,2,0	1/1:6,0:6:8.22:49,8,0	0/1:17,0:17:17.22:17,0,322	0/0:17,0:17:50.89:0,51,447	0/0:6,0:5:8.99:0,9,84	0/1:6,0:6:13.49:124,0,13	0/1:4,0:4:9.51:10,0,27	0/1:9,1:10:7.88:118,0,8	1/1:19,1:20:47.07:286,47,0	0/0:24,0:24:72.19:0,72,1056	0/0:12,0:12:29.94:0,30,278	0/0:29,0:29:62.66:0,63,1174
chr10	103211627	.	A	AGGG	8138.33	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=5.088;DP=418;FS=14.667;HRun=3;HaplotypeScore=113.8212;InbreedingCoeff=0.9790;MQ=68.41;MQ0=0;MQRankSum=-8.293;QD=49.03;ReadPosRankSum=0.853;VQSLOD=3.6695;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,13:20:39.09:751,39,0	1/1:4,3:7:14.72:245,15,0	0/0:11,0:11:30.05:0,30,360	0/0:10,0:9:27.08:0,27,363	0/0:20,0:20:51.17:0,51,814	1/1:3,13:16:48.16:941,48,0	1/1:4,2:6:9.03:159,9,0	0/0:27,0:27:69.07:0,69,802	1/1:3,12:15:41.93:828,42,0	0/0:22,0:22:63.21:0,63,984	0/0:16,0:16:39.13:0,39,608	0/0:14,0:14:39.13:0,39,621	1/1:4,15:19:44.99:927,45,0	1/1:2,6:8:24.08:495,24,0	0/0:10,0:10:23.83:0,24,278	0/0:16,0:16:48.15:0,48,726	1/1:2,18:20:48.16:980,48,0	1/1:4,4:8:21.07:425,21,0	0/0:16,0:16:45.10:0,45,514	0/0:18,0:18:51.13:0,51,599	0/0:6,0:5:12.02:0,12,133	1/1:2,5:7:21.03:378,21,0	1/1:2,3:5:12.03:222,12,0	1/1:7,6:13:27.09:535,27,0	1/1:4,18:22:60.21:1253,60,0	0/0:24,0:24:63.21:0,63,970	0/0:13,0:13:30.08:0,30,359	0/0:28,0:28:75.25:0,75,1181
chr10	103211686	.	ACACAC	A	8614.93	PASS	AB=0.969;AC=34;AF=0.607;AN=56;BaseQRankSum=13.532;DP=481;FS=9.065;HRun=0;HaplotypeScore=121.3256;InbreedingCoeff=0.6990;MQ=55.28;MQ0=24;MQRankSum=-11.803;QD=29.71;ReadPosRankSum=5.160;VQSLOD=3.5885;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:45.14:945,45,0	1/1:0,3:3:9.03:200,9,0	0/0:32,0:16:44.38:0,44,816	0/0:29,0:18:22.08:0,22,944	0/0:23,0:23:69.24:0,69,2095	1/1:1,15:15:39.13:868,39,0	1/1:0,18:18:42.14:907,42,0	0/1:28,0:24:68.41:198,0,68	1/1:3,14:16:24.07:492,24,0	0/0:25,0:25:72.24:0,72,2080	0/0:11,0:11:27.09:0,27,822	0/0:20,0:20:60.20:0,60,1643	1/1:2,11:13:36.10:752,36,0	1/1:1,9:10:15.04:294,15,0	1/1:3,0:13:19.84:311,20,0	0/0:14,0:14:39.13:0,39,1246	1/1:8,9:16:38.75:720,39,0	1/1:3,16:17:36.12:743,36,0	0/1:13,0:12:29.11:49,0,29	0/1:22,0:21:10.31:75,0,10	1/1:20,0:17:13.95:36,14,0	1/1:0,8:8:18.06:401,18,0	1/1:0,3:3:3.01:69,3,0	1/1:6,15:17:36.59:758,37,0	1/1:1,12:13:30.74:777,31,0	0/0:22,0:21:62.02:0,62,1813	0/1:6,0:6:1.02:20,0,1	0/0:15,0:15:45.15:0,45,1302
chr10	103211688	.	ACAC	A	6951.94	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=13.965;DP=483;FS=8.956;HRun=0;HaplotypeScore=113.9466;InbreedingCoeff=0.9559;MQ=57.55;MQ0=24;MQRankSum=-11.003;QD=23.89;ReadPosRankSum=4.770;VQSLOD=4.5043;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:45.08:453,45,0	1/1:3,0:3:9.02:91,9,0	0/0:33,0:17:45.42:0,45,649	0/0:28,0:18:47.06:0,47,728	0/0:24,0:24:72.22:0,72,1613	1/1:16,0:15:39.08:396,39,0	1/1:18,0:18:42.10:447,42,0	1/1:8,20:23:33.19:692,33,0	1/1:17,0:16:24.04:238,24,0	0/0:25,0:25:71.92:0,72,1516	0/0:10,0:10:27.09:0,27,608	0/0:20,0:20:59.67:0,60,1211	1/1:13,0:13:36.05:355,36,0	1/1:10,0:10:15.03:148,15,0	1/1:4,11:14:15.03:292,15,0	0/0:13,0:13:39.13:0,39,925	1/1:19,0:18:41.52:430,42,0	1/1:19,0:17:36.08:380,36,0	1/1:1,12:13:33.01:468,33,0	1/1:4,18:21:54.13:841,54,0	1/1:3,15:16:27.09:474,27,0	1/1:8,0:8:18.04:183,18,0	1/1:3,0:3:3.01:32,3,0	1/1:21,0:17:36.04:376,36,0	1/1:12,0:12:36.07:365,36,0	0/0:24,0:23:67.20:0,67,1397	1/1:3,4:6:18.05:289,18,0	0/0:15,0:15:45.15:0,45,963
chr10	103211690	.	AC	A	3507.08	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=14.915;DP=479;FS=8.861;HRun=1;HaplotypeScore=111.6404;InbreedingCoeff=0.9495;MQ=59.78;MQ0=24;MQRankSum=-11.027;QD=12.26;ReadPosRankSum=5.524;VQSLOD=1.8441;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:43.72:268,44,0	1/1:3,0:3:8.71:48,9,0	0/0:32,0:17:44.13:0,44,510	0/0:28,0:18:35.54:0,36,546	0/0:23,0:23:69.23:0,69,1071	1/1:15,1:15:37.82:212,38,0	1/1:18,0:18:40.95:253,41,0	1/1:21,4:20:48.28:363,48,0	1/1:15,1:15:20.34:113,20,0	0/0:26,0:26:73.03:0,73,1037	0/0:10,0:10:26.99:0,27,414	0/0:21,0:21:59.67:0,60,854	1/1:11,1:12:31.72:173,32,0	1/1:9,0:9:11.61:64,12,0	1/1:16,0:15:13.43:123,13,0	0/0:14,0:14:42.13:0,42,636	1/1:15,4:18:40.91:302,41,0	1/1:19,0:17:35.24:245,35,0	1/1:12,2:13:32.42:217,32,0	1/1:22,0:21:49.95:310,50,0	1/1:16,2:16:26.40:167,26,0	1/1:8,0:8:17.48:98,17,0	1/1:3,0:3:2.94:18,3,0	1/1:19,2:17:32.77:223,33,0	1/1:13,0:13:37.91:225,38,0	0/0:24,0:23:65.34:0,65,961	1/1:6,0:5:14.58:84,15,0	0/0:15,0:15:45.15:0,45,668
chr10	103211693	.	C	CAAA	3467.31	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=13.049;DP=493;FS=10.100;HRun=5;HaplotypeScore=132.5260;InbreedingCoeff=0.9439;MQ=62.55;MQ0=24;MQRankSum=-10.290;QD=11.64;ReadPosRankSum=1.850;VQSLOD=-0.1903;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,1:30:48.06:275,48,0	1/1:3,0:3:7.24:25,7,0	0/0:31,0:17:30.11:0,30,398	0/0:28,0:18:40.38:0,40,452	0/0:26,0:26:63.18:0,63,906	1/1:16,0:15:32.42:120,32,0	1/1:19,0:19:34.65:171,35,0	1/1:28,0:23:46.47:461,46,0	1/1:16,0:15:16.60:56,17,0	0/0:25,0:25:66.21:0,66,940	0/0:9,0:9:14.84:0,15,221	0/0:21,0:21:57.18:0,57,807	1/1:13,0:13:31.04:129,31,0	1/1:9,0:9:9.49:31,9,0	1/1:16,0:15:36.14:180,36,0	0/0:14,0:14:42.14:0,42,616	1/1:19,1:19:41.53:382,42,0	1/1:21,1:20:44.13:337,44,0	1/1:15,0:14:37.02:340,37,0	1/1:19,0:18:43.50:235,44,0	1/1:18,0:16:28.55:184,29,0	1/1:9,0:9:20.47:97,20,0	1/1:3,0:3:0.47:1,0,0	1/1:21,1:18:30.66:213,31,0	1/1:14,0:14:33:175,33,0	0/0:25,0:24:60.17:0,60,826	1/1:6,0:5:13.14:57,13,0	0/0:16,0:16:44.36:0,44,609
chr10	103212761	.	AAGGAAGGAAGGGAGGGAGGAAGGAAGGAAGGG	A	598.30	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=0.467;DP=535;FS=1.194;HRun=0;HaplotypeScore=334.8468;InbreedingCoeff=0.1007;MQ=48.68;MQ0=18;MQRankSum=-0.850;QD=5.34;ReadPosRankSum=-1.403;VQSLOD=1.7095;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:19:99:146,0,466	0/0:8,0:8:12.04:0,12,423	0/0:3,0:3:5.95:0,6,47	0/0:6,0:4:9.03:0,9,316	0/0:22,0:22:57.15:0,57,4271	0/1:21,0:21:5.45:5,0,468	0/1:18,0:18:8.95:9,0,325	0/0:19,0:13:29.99:0,30,660	0/1:13,0:13:7.87:8,0,294	0/0:26,0:23:57.20:0,57,5124	0/0:19,0:19:57.20:0,57,5124	0/0:20,0:20:51.18:0,51,4636	0/0:14,0:13:6.12:0,6,962	0/0:19,0:17:19.88:0,20,421	1/1:2,23:25:6.02:400,6,0	0/0:23,0:23:66.23:0,66,5706	0/1:15,0:15:99:150,0,694	0/0:24,0:24:9.43:0,9,293	0/0:15,0:11:20.10:0,20,554	0/0:24,0:23:45.09:0,45,1432	0/0:9,0:7:5.88:0,6,38	0/0:20,0:20:42.14:0,42,1107	0/0:18,0:17:10.09:0,10,505	0/0:24,0:23:18.06:0,18,444	0/0:36,0:35:51.15:0,51,1283	0/0:27,0:27:75.26:0,75,6724	0/0:33,0:30:69.10:0,69,1826	0/0:14,0:12:36.12:0,36,3305
chr10	103212770	.	AGGG	A	949.81	PASS	AB=0.952;AC=12;AF=0.214;AN=56;BaseQRankSum=6.691;DP=532;FS=0.000;HRun=3;HaplotypeScore=105.1790;InbreedingCoeff=0.5584;MQ=46.44;MQ0=22;MQRankSum=-7.027;QD=5.90;ReadPosRankSum=0.294;VQSLOD=-0.6304;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:23.04:23,0,231	0/0:8,0:7:9.08:0,9,100	0/0:3,0:3:9.02:0,9,110	0/0:5,0:3:9.03:0,9,191	0/0:22,0:22:62.58:0,63,1304	0/0:21,0:21:23.75:0,24,309	0/0:17,0:17:14.93:0,15,178	1/1:20,0:13:1.35:45,1,0	0/0:14,0:14:19.07:0,19,198	0/0:26,0:23:69.24:0,69,1556	0/0:21,0:20:60.21:0,60,1397	0/0:19,0:19:54.17:0,54,1238	0/0:14,0:13:30.48:0,30,349	0/0:18,0:16:15.29:0,15,94	0/1:23,0:23:3.74:4,0,12	0/0:23,0:23:69.24:0,69,1604	0/1:12,0:13:19.85:20,0,360	0/0:23,0:23:22.55:0,23,257	0/1:12,1:8:1.75:141,0,2	1/1:13,14:26:33.67:336,34,0	1/1:9,0:7:11:56,11,0	0/0:21,0:21:42.12:0,42,474	0/0:17,0:16:21.71:0,22,150	0/0:20,0:19:21.05:0,21,314	0/0:38,0:37:41.14:0,41,347	0/0:25,0:25:75.26:0,75,1791	1/1:21,16:32:27.44:486,27,0	0/0:15,0:13:39.13:0,39,934
chr10	103212774	.	AGGG	A	635.83	PASS	AB=0.939;AC=12;AF=0.214;AN=56;BaseQRankSum=12.218;DP=538;FS=2.476;HRun=3;HaplotypeScore=104.5875;InbreedingCoeff=0.0703;MQ=46.43;MQ0=23;MQRankSum=-10.602;QD=3.18;ReadPosRankSum=5.271;VQSLOD=-0.4091;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:19:34.32:34,0,166	0/0:10,0:8:1.25:0,1,93	0/0:5,0:3:5.75:0,6,76	0/0:8,0:4:12.04:0,12,229	0/0:22,0:22:59.55:0,60,1254	0/0:21,0:21:20.86:0,21,215	0/0:17,0:17:10.30:0,10,142	0/1:17,4:13:66.35:66,0,71	0/0:16,0:15:7.93:0,8,135	0/0:27,0:24:72.24:0,72,1604	0/0:22,0:21:63.22:0,63,1443	0/0:18,0:18:51.18:0,51,1215	0/0:13,0:12:17.81:0,18,221	0/1:19,0:17:3.32:3,0,29	1/1:23,0:23:4.17:20,4,0	0/0:23,0:23:69.19:0,69,1553	0/1:13,0:13:22.49:22,0,330	0/0:20,0:20:13.75:0,14,130	0/1:12,1:8:22.90:69,0,23	1/1:26,3:28:9.05:247,9,0	0/1:7,1:6:8.36:34,0,8	0/0:20,0:20:20.65:0,21,371	0/1:18,0:17:19.29:19,0,45	0/0:19,0:18:18.06:0,18,256	0/0:37,0:36:9.17:0,9,294	0/0:26,0:26:78.26:0,78,1798	0/1:29,6:29:51.78:268,0,52	0/0:14,0:13:39.13:0,39,931
chr10	103212776	.	GGAGGA	G	1775.48	PASS	AB=0.969;AC=10;AF=0.179;AN=56;BaseQRankSum=7.509;DP=545;FS=2.392;HRun=0;HaplotypeScore=115.8534;InbreedingCoeff=0.6881;MQ=46.46;MQ0=25;MQRankSum=-8.304;QD=13.55;ReadPosRankSum=-0.527;VQSLOD=3.2630;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:4.33:0,4,233	0/0:10,0:8:9.13:0,9,117	0/0:7,0:4:8.92:0,9,131	0/0:8,0:4:12.04:0,12,206	0/0:22,0:22:66.15:0,66,1567	0/0:19,0:19:17.65:0,18,226	0/0:19,0:19:14.97:0,15,224	1/1:20,0:12:12.22:139,12,0	0/0:16,0:15:11.06:0,11,159	0/0:28,0:25:72.25:0,72,1951	0/0:22,0:21:63.20:0,63,1748	0/0:18,0:18:51.17:0,51,1501	0/0:13,0:12:26.75:0,27,301	0/0:19,0:17:15.03:0,15,93	0/1:23,0:23:11.70:20,0,12	0/0:22,0:22:66.22:0,66,1882	0/0:13,0:13:20.55:0,21,466	0/0:20,0:20:16.83:0,17,172	0/1:14,1:9:7.86:194,0,8	1/1:17,14:30:68.68:745,69,0	1/1:8,0:6:8.95:67,9,0	0/0:20,0:20:36.15:0,36,465	0/0:18,0:17:19.97:0,20,144	0/0:19,0:18:18.06:0,18,298	0/0:38,0:37:39.24:0,39,397	0/0:26,0:26:78.25:0,78,2180	1/1:18,16:29:57.25:773,57,0	0/0:14,0:13:39.13:0,39,1103
chr10	103212780	.	GA	G	420.15	PASS	AB=0.904;AC=7;AF=0.125;AN=56;BaseQRankSum=7.151;DP=543;FS=6.616;HRun=2;HaplotypeScore=94.1703;InbreedingCoeff=0.1479;MQ=46.13;MQ0=26;MQRankSum=-6.600;QD=3.31;ReadPosRankSum=1.383;VQSLOD=0.2229;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:20:20.35:0,20,149	0/0:10,0:8:11.70:0,12,116	0/0:8,0:4:9.03:0,9,130	0/0:7,0:3:6.02:0,6,90	0/0:21,0:21:63.09:0,63,836	0/0:19,0:19:17.98:0,18,199	0/0:19,0:19:18.01:0,18,231	0/1:14,4:10:8.65:9,0,210	0/0:16,0:15:11.87:0,12,138	0/0:27,0:24:72.21:0,72,1012	0/0:23,0:22:66.22:0,66,983	0/0:20,0:20:50.90:0,51,761	0/0:15,0:14:32.63:0,33,343	0/0:19,0:17:20.39:0,20,162	0/1:23,0:23:0.76:1,0,34	0/0:21,0:21:63.20:0,63,922	0/0:13,0:13:20.91:0,21,380	0/0:18,0:19:14.87:0,15,149	0/1:14,1:9:32.52:33,0,82	0/1:29,3:31:7.08:242,0,7	1/1:4,1:3:4.07:12,4,0	0/0:19,0:19:38.46:0,38,411	0/0:18,0:17:24.11:0,24,164	0/0:19,0:19:18.06:0,18,262	0/0:38,0:37:49.26:0,49,381	0/0:27,0:27:78.25:0,78,1144	0/1:28,6:28:33.13:239,0,33	0/0:15,0:14:39.13:0,39,582
chr10	103212785	.	AAGGAAGGG	A	5088.82	PASS	AB=0.911;AC=33;AF=0.589;AN=56;BaseQRankSum=11.712;DP=544;FS=1.534;HRun=0;HaplotypeScore=123.3448;InbreedingCoeff=0.4682;MQ=45.84;MQ0=23;MQRankSum=-10.526;QD=13.50;ReadPosRankSum=3.076;VQSLOD=3.7709;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:18:12.03:262,12,0	1/1:5,6:9:9.02:187,9,0	0/0:9,0:4:9.03:0,9,260	0/0:7,0:3:3.01:0,3,113	0/0:21,0:21:54.64:0,55,1657	1/1:2,15:17:3.01:75,3,0	0/1:4,16:20:10.95:84,0,11	0/1:20,0:12:61.23:61,0,85	1/1:4,13:15:3.01:82,3,0	0/0:24,0:22:63.08:0,63,2036	0/0:24,0:23:57.15:0,57,1801	0/0:22,0:22:57.14:0,57,1551	1/1:10,4:13:27.01:425,27,0	1/1:2,17:17:18.06:446,18,0	1/1:23,0:23:4.83:42,5,0	0/0:20,0:20:54.14:0,54,1586	1/1:12,1:13:17.55:177,18,0	1/1:6,14:20:3.01:82,3,0	1/1:12,0:7:8.37:124,8,0	0/1:33,0:32:9.61:526,0,10	0/1:6,0:5:25.57:26,0,32	1/1:3,16:19:26.25:496,26,0	1/1:1,17:17:15.80:473,16,0	1/1:8,12:20:2.98:21,3,0	1/1:7,31:37:7.33:895,7,0	0/0:26,0:26:69.20:0,69,2099	0/1:36,0:29:13.73:604,0,14	0/0:14,0:14:30.07:0,30,931
chr10	103212808	.	A	AAAAG	5750.11	PASS	AB=1.000;AC=36;AF=0.692;AN=52;BaseQRankSum=-1.300;DP=532;FS=0.000;HRun=0;HaplotypeScore=106.4555;InbreedingCoeff=0.4713;MQ=45.14;MQ0=12;MQRankSum=0.036;QD=14.02;ReadPosRankSum=1.648;VQSLOD=4.0967;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:23:21.07:0,21,318	1/1:8,0:7:6.02:125,6,0	./.	./.	1/1:10,10:20:26.88:366,27,0	0/0:17,0:17:12.02:0,12,157	0/0:21,0:21:14.91:0,15,178	1/1:28,0:21:29.73:206,30,0	1/1:17,0:15:9.03:162,9,0	1/1:12,10:22:33.04:455,33,0	1/1:24,0:27:54.13:931,54,0	1/1:18,0:18:24.06:436,24,0	1/1:11,0:11:15.04:271,15,0	1/1:18,0:16:5.81:47,6,0	1/1:27,0:26:5.87:52,6,0	1/1:13,0:13:15.03:261,15,0	1/1:10,0:10:13.81:196,14,0	0/0:14,0:14:2.99:0,3,24	0/0:13,0:10:2.19:0,2,21	0/1:31,0:31:65.35:65,0,102	0/1:12,0:11:29.32:63,0,29	1/1:17,0:17:12.04:230,12,0	0/0:16,0:16:8.53:0,9,131	0/1:24,0:23:10.31:608,0,10	1/1:31,0:31:12.04:272,12,0	1/1:28,0:27:39.12:772,39,0	0/1:37,0:30:57.94:58,0,152	1/1:11,0:11:12.01:175,12,0
chr10	103214331	.	TG	T	645.27	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.611;DP=662;FS=1.821;HRun=2;HaplotypeScore=72.0209;InbreedingCoeff=0.9989;MQ=94.26;MQ0=0;MQRankSum=-1.420;QD=32.26;ReadPosRankSum=0.494;VQSLOD=3.4735;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.29:0,87,1304	0/0:9,0:9:27.09:0,27,405	0/0:30,0:29:53.71:0,54,1003	0/0:30,0:30:43.80:0,44,838	0/0:27,0:27:81.27:0,81,1212	0/0:23,0:23:63.21:0,63,944	0/0:21,0:21:63.21:0,63,937	0/0:31,0:31:93.30:0,93,1354	0/0:23,0:23:69.23:0,69,1034	0/0:22,0:22:66.20:0,66,967	0/0:21,0:21:57.16:0,57,814	0/0:21,0:21:63.17:0,63,916	0/0:20,0:20:60.19:0,60,879	0/0:20,0:20:60.20:0,60,899	1/1:0,20:20:57.19:740,57,0	0/0:19,0:19:57.19:0,57,854	0/0:30,0:30:84.22:0,84,1214	0/0:25,0:25:75.25:0,75,1123	0/0:28,0:28:84.22:0,84,1212	0/0:29,0:29:87.26:0,87,1255	0/0:15,0:15:45.15:0,45,674	0/0:22,0:22:63.21:0,63,941	0/0:28,0:28:84.28:0,84,1259	0/0:22,0:22:66.22:0,66,989	0/0:22,0:22:66.22:0,66,984	0/0:30,0:30:90.30:0,90,1349	0/0:29,0:29:84.24:0,84,1228	0/0:16,0:16:48.16:0,48,719
chr10	103214654	.	AAAAG	A	9788.01	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=11.595;DP=556;FS=0.000;HRun=0;HaplotypeScore=100.7022;InbreedingCoeff=0.9965;MQ=64.58;MQ0=0;MQRankSum=-1.593;QD=38.84;ReadPosRankSum=4.247;VQSLOD=5.0434;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,37:41:99:1785,105,0	1/1:1,8:9:20.60:331,21,0	0/0:17,0:13:29.59:0,30,593	0/0:15,0:12:26.87:0,27,521	0/0:14,0:14:33.11:0,33,816	1/1:5,11:16:33.11:571,33,0	1/1:2,28:29:66.23:1142,66,0	0/0:41,0:41:87.30:0,87,2149	1/1:4,8:12:27.09:467,27,0	0/0:24,0:24:66.23:0,66,1624	0/0:17,0:17:39.13:0,39,985	0/0:11,0:11:27.09:0,27,683	1/1:1,14:15:36.12:623,36,0	1/1:2,16:18:42.14:727,42,0	0/0:22,0:22:54.19:0,54,1357	0/0:18,0:18:48.16:0,48,1180	1/1:5,19:24:44:873,44,0	1/1:6,21:27:66.23:1142,66,0	0/0:17,0:17:39.13:0,39,983	0/0:22,0:22:45.14:0,45,1079	0/0:21,0:21:54.18:0,54,1357	1/1:1,6:7:15.05:259,15,0	1/1:3,11:14:30.10:519,30,0	1/1:3,18:21:38.98:674,39,0	1/1:4,14:18:39.13:675,39,0	0/0:24,0:24:66.23:0,66,1643	0/0:28,0:28:72.25:0,72,1742	0/0:13,0:13:33.11:0,33,834
chr10	103215486	.	GA	G	1241.20	PASS	AB=0.875;AC=13;AF=0.250;AN=52;BaseQRankSum=-0.077;DP=385;FS=5.687;HRun=8;HaplotypeScore=72.3491;InbreedingCoeff=0.8309;MQ=40.35;MQ0=17;MQRankSum=-4.058;QD=12.80;ReadPosRankSum=1.233;VQSLOD=3.1662;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:51.56:0,52,570	0/0:10,0:10:21.01:0,21,227	./.	./.	0/0:17,0:17:33.07:0,33,365	0/0:20,1:21:19.21:0,19,500	0/0:15,0:14:30.07:0,30,339	1/1:6,9:15:10.66:237,11,0	0/0:9,0:8:18.01:0,18,199	0/0:17,0:17:27.46:0,27,413	0/0:14,0:12:24.07:0,24,288	0/0:16,0:15:36.08:0,36,407	0/0:15,0:15:40.65:0,41,386	0/0:9,0:9:10.23:0,10,95	1/1:10,11:21:15.13:266,15,0	0/0:12,0:12:29.26:0,29,316	0/0:21,0:19:42.54:0,43,460	0/0:22,0:20:33.95:0,34,368	1/1:4,14:18:38.96:376,39,0	1/1:4,10:14:27.03:260,27,0	1/1:4,3:3:3:29,3,0	0/0:11,0:11:27.08:0,27,326	0/0:10,0:8:21.06:0,21,253	0/0:17,0:16:14.99:0,15,155	0/0:14,0:14:18.47:0,18,201	0/0:12,0:12:27.06:0,27,305	1/1:5,10:14:23.78:230,24,0	0/1:5,1:3:19.89:20,0,36
chr10	103216092	.	GCA	G	8765.48	PASS	AB=0.824;AC=40;AF=0.714;AN=56;BaseQRankSum=6.730;DP=705;FS=0.399;HRun=0;HaplotypeScore=136.4736;InbreedingCoeff=0.6367;MQ=58.93;MQ0=17;MQRankSum=-0.207;QD=16.86;ReadPosRankSum=4.251;VQSLOD=4.4620;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,36:52:72.21:827,72,0	1/1:1,8:10:23.90:260,24,0	0/0:46,0:19:33.70:0,34,409	0/0:44,0:22:34.24:0,34,436	0/0:16,0:16:24.08:0,24,376	1/1:5,11:16:21.02:255,21,0	1/1:4,13:18:32.51:354,33,0	1/1:16,21:36:63.19:756,63,0	1/1:8,23:32:61.43:736,61,0	0/0:23,1:24:11.81:0,12,673	0/1:8,1:9:18.42:18,0,195	0/0:24,0:23:45.14:0,45,665	1/1:8,12:21:38.15:410,38,0	1/1:8,14:22:26.96:327,27,0	1/1:8,0:27:59.06:282,59,0	0/0:29,0:29:39.83:0,40,995	1/1:8,25:32:66.03:779,66,0	1/1:12,10:22:22.62:399,23,0	1/1:8,4:12:23.52:246,24,0	1/1:5,11:16:30.04:336,30,0	1/1:16,59:73:99:1403,104,0	1/1:3,8:11:18.05:218,18,0	1/1:3,2:5:3.01:37,3,0	0/1:9,23:33:3.89:446,0,4	1/1:5,8:12:4.09:231,4,0	0/1:22,3:25:48.21:48,0,724	1/1:6,11:16:33.10:391,33,0	0/1:11,1:12:6.31:6,0,343
chr10	103216136	.	TACACAC	T	3854.41	PASS	AB=0.872;AC=33;AF=0.611;AN=54;BaseQRankSum=7.024;DP=581;FS=1.697;HRun=0;HaplotypeScore=187.0335;InbreedingCoeff=0.5387;MQ=56.39;MQ0=7;MQRankSum=-9.006;QD=9.52;ReadPosRankSum=-3.701;VQSLOD=2.2185;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,3:34:5.86:92,0,6	1/1:7,2:10:8.99:124,9,0	./.	0/1:31,0:18:0.87:1,0,18	0/0:5,0:6:8.23:0,8,268	1/1:5,5:10:11.96:138,12,0	0/0:13,0:21:6.82:0,7,85	1/1:18,1:19:17.77:162,18,0	1/1:13,10:25:36.46:566,36,0	0/0:14,0:16:33.42:0,33,591	0/0:8,0:10:20.10:0,20,472	0/0:25,0:26:52.45:0,52,1492	1/1:8,6:15:20.24:335,20,0	1/1:15,2:17:8.53:79,9,0	1/1:17,0:23:2.51:51,3,0	0/0:32,0:34:72.22:0,72,1982	1/1:21,5:26:14.47:514,14,0	1/1:18,5:23:10.09:370,10,0	0/1:10,3:13:34.77:228,0,35	0/1:5,3:8:10.97:66,0,11	0/1:50,2:52:51.56:106,0,52	1/1:8,3:12:5.14:43,5,0	1/1:4,10:14:3.02:121,3,0	1/1:25,7:33:11.78:126,12,0	1/1:6,10:20:18.39:307,18,0	0/0:14,0:14:27.08:0,27,735	1/1:7,7:15:19.61:425,20,0	0/0:15,0:17:39.09:0,39,865
chr10	103216209	.	G	GT	2753.98	PASS	AB=0.913;AC=11;AF=0.196;AN=56;BaseQRankSum=-9.554;DP=652;FS=0.849;HRun=10;HaplotypeScore=100.9631;InbreedingCoeff=0.8850;MQ=69.72;MQ0=0;MQRankSum=-0.262;QD=17.00;ReadPosRankSum=-3.128;VQSLOD=2.8198;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:38:91.83:0,92,737	0/0:11,0:11:26.96:0,27,222	0/0:17,0:17:29.80:0,30,228	0/0:14,0:16:17.71:0,18,124	0/0:23,1:24:24.67:0,25,404	0/1:19,2:21:10.19:10,0,320	0/0:20,0:20:56.92:0,57,467	1/1:7,28:36:59.33:787,59,0	0/0:33,0:33:39.81:0,40,523	0/0:27,0:28:64.94:0,65,523	0/0:15,0:15:35.95:0,36,295	0/0:21,0:21:50.92:0,51,418	0/0:15,0:15:38.88:0,39,313	0/0:25,0:25:65.68:0,66,532	0/0:2,0:27:49.01:0,49,155	0/0:19,0:19:44.93:0,45,369	0/0:27,0:26:59.89:0,60,492	0/0:28,0:28:63.12:0,63,518	1/1:6,17:23:48.12:512,48,0	1/1:9,12:22:32.05:488,32,0	1/1:14,24:38:78.14:806,78,0	0/0:15,0:15:32.90:0,33,264	0/0:15,0:15:25.95:0,26,203	0/0:29,0:29:77.44:0,77,618	0/0:18,0:19:34.96:0,35,277	0/0:30,0:30:74.86:0,75,610	1/1:4,18:22:11.45:327,11,0	0/0:16,0:16:35.91:0,36,291
chr10	103217633	.	GTCCCCCTC	G	13643.77	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=10.921;DP=460;FS=1.351;HRun=0;HaplotypeScore=133.3139;InbreedingCoeff=0.9819;MQ=68.66;MQ0=0;MQRankSum=-13.932;QD=47.21;ReadPosRankSum=1.145;VQSLOD=4.6840;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:20:45.14:1115,45,0	1/1:1,6:7:21.04:496,21,0	0/0:18,0:14:30.04:0,30,626	0/0:24,0:22:24.16:0,24,1073	0/0:25,0:25:63.18:0,63,2361	1/1:2,14:16:39.13:1001,39,0	1/1:4,17:21:30.64:1206,31,0	1/1:22,5:27:66.04:947,66,0	1/1:0,19:19:51.18:1343,51,0	0/0:21,0:21:57.20:0,57,2404	0/0:19,0:19:54.17:0,54,2183	0/0:19,0:19:57.18:0,57,2266	1/1:1,16:17:39.13:1027,39,0	1/1:3,9:12:21.07:512,21,0	1/1:4,7:11:23.97:512,24,0	0/0:15,0:15:42.10:0,42,1676	1/1:6,12:18:26.94:588,27,0	1/1:1,12:13:21.07:513,21,0	1/1:5,11:16:33.04:552,33,0	1/1:2,7:9:21.05:450,21,0	1/1:0,10:10:12.03:265,12,0	1/1:1,9:11:24.08:630,24,0	1/1:3,13:16:33.11:869,33,0	1/1:3,9:12:9.03:237,9,0	1/1:4,10:14:27.09:683,27,0	0/0:19,0:19:48.12:0,48,1509	1/1:8,11:19:33.01:697,33,0	0/0:11,0:11:27.09:0,27,1056
chr10	103219188	.	T	TTCCTCCC	4910.62	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-6.929;DP=665;FS=2.575;HRun=0;HaplotypeScore=145.4178;InbreedingCoeff=0.9878;MQ=67.60;MQ0=0;MQRankSum=-9.006;QD=34.58;ReadPosRankSum=-2.140;VQSLOD=4.0288;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,99,2054	0/0:18,0:18:33.10:0,33,699	0/0:20,0:17:28.99:0,29,689	0/0:14,0:15:11.07:0,11,173	0/0:20,0:20:57.20:0,57,1317	0/0:21,0:21:42.12:0,42,898	0/0:32,0:32:66.20:0,66,1465	1/1:28,2:33:21.82:513,22,0	0/0:19,0:19:39.12:0,39,870	0/0:23,0:23:48.15:0,48,1041	0/0:23,0:23:57.18:0,57,1228	0/0:17,0:17:42.13:0,42,945	0/0:31,0:31:78.25:0,78,1737	0/0:24,0:24:57.17:0,57,1245	0/0:25,0:25:66.21:0,66,1462	0/0:24,0:24:57.19:0,57,1295	0/0:19,0:19:51.18:0,51,1179	0/0:23,0:23:45.13:0,45,973	1/1:16,6:25:27.09:718,27,0	1/1:7,9:20:33.11:1199,33,0	1/1:10,7:24:18.06:590,18,0	0/0:16,0:16:30.10:0,30,704	0/0:22,0:22:57.18:0,57,1275	0/0:26,0:26:60.18:0,60,1364	0/0:15,0:15:39.11:0,39,821	0/0:32,0:32:69.22:0,69,1454	1/1:13,24:40:51.65:1891,52,0	0/0:15,0:15:36.12:0,36,848
chr10	103220266	.	GGTGTGTGT	G	1759.88	PASS	AB=0.679;AC=26;AF=0.542;AN=48;BaseQRankSum=7.406;DP=635;FS=2.613;HRun=0;HaplotypeScore=238.0008;InbreedingCoeff=0.5219;MQ=60.53;MQ0=8;MQRankSum=-7.726;QD=4.96;ReadPosRankSum=1.637;VQSLOD=2.7612;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,11:30:0:0,0,0	1/1:5,3:8:6.02:132,6,0	0/0:27,0:18:9.03:0,9,288	0/0:23,0:16:9.03:0,9,255	0/0:17,0:21:48.15:0,48,1618	1/1:8,13:23:1.82:5,2,0	1/1:23,11:37:12.32:263,12,0	./.	1/1:8,14:25:6.02:132,6,0	0/0:17,0:18:39.11:0,39,1371	0/0:16,0:19:24.07:0,24,730	0/0:26,0:28:60.19:0,60,2255	1/1:7,12:20:12.04:304,12,0	0/1:14,16:33:13.76:69,0,14	0/1:13,3:29:7.42:7,0,46	0/0:19,0:22:51.18:0,51,1826	./.	0/1:13,7:21:99:339,0,101	1/1:9,0:17:9.03:168,9,0	1/1:8,0:25:3.01:56,3,0	./.	1/1:10,13:24:0.01:0,0,0	1/1:4,7:11:0.94:1,1,0	./.	1/1:11,12:24:0.47:1,0,0	0/0:20,0:22:36.11:0,36,1262	1/1:11,0:27:24.08:441,24,0	0/0:7,0:6:12.03:0,12,398
chr10	103220901	.	CCCT	C	452.61	PASS	AB=0.635;AC=4;AF=0.074;AN=54;BaseQRankSum=2.053;DP=393;FS=6.132;HRun=0;HaplotypeScore=46.4708;InbreedingCoeff=0.2117;MQ=44.27;MQ0=47;MQRankSum=-2.659;QD=9.05;ReadPosRankSum=-2.156;VQSLOD=1.3959;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:15:33.85:0,34,607	0/0:5,0:4:9.03:0,9,185	0/0:8,0:1:3.01:0,3,64	0/0:10,0:4:12:0,12,123	0/0:19,0:15:36.03:0,36,707	0/0:17,0:15:30.05:0,30,413	0/0:12,0:9:15.05:0,15,297	0/1:4,11:11:32.50:321,0,32	0/0:9,0:7:11.92:0,12,178	0/0:19,0:15:38.95:0,39,682	0/0:14,0:12:29.97:0,30,558	0/0:12,0:11:22.63:0,23,413	0/0:8,0:7:18.06:0,18,342	0/0:4,0:2:6.02:0,6,116	0/0:2,0:5:3.01:0,3,65	0/0:8,0:8:18.05:0,18,351	0/0:26,0:22:60.17:0,60,1102	0/0:35,0:29:72.22:0,72,1481	0/1:10,8:11:64.79:154,0,65	./.	0/0:8,7:9:6.02:0,6,95	0/0:5,0:5:12:0,12,229	0/0:11,0:8:9.03:0,9,174	0/0:6,0:5:9.03:0,9,160	0/0:14,0:9:21.54:0,22,484	0/0:14,0:6:17.83:0,18,204	1/1:3,14:13:5.93:81,6,0	0/0:18,0:14:33.08:0,33,667
chr10	103222868	.	TAGA	T	3626.50	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.822;DP=520;FS=12.355;HRun=0;HaplotypeScore=87.6302;InbreedingCoeff=0.9662;MQ=75.50;MQ0=0;MQRankSum=-2.781;QD=36.26;ReadPosRankSum=1.954;VQSLOD=3.5660;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,111,2281	0/0:2,0:2:6.02:0,6,131	0/0:22,0:21:42.60:0,43,766	0/0:16,0:16:28.20:0,28,641	0/0:20,0:20:51.18:0,51,1114	0/0:17,0:17:51.17:0,51,1076	0/0:32,0:32:93.32:0,93,1992	1/1:1,13:14:39.13:597,39,0	0/0:15,0:15:33.11:0,33,706	0/0:14,0:14:39.13:0,39,852	0/0:12,0:12:33.11:0,33,688	0/0:19,0:19:51.13:0,51,1066	0/0:10,0:10:24.08:0,24,501	0/0:20,0:20:48.16:0,48,1048	1/1:0,20:20:45.15:712,45,0	0/0:15,0:15:42.14:0,42,917	0/0:39,0:39:99:0,111,2291	0/0:17,0:17:51.16:0,51,1054	1/1:1,13:14:39.13:606,39,0	1/1:3,14:17:36.12:570,36,0	1/1:1,30:31:63.21:999,63,0	0/0:14,0:14:39.13:0,39,817	0/0:10,0:10:27.09:0,27,563	0/0:23,0:23:63.22:0,63,1353	0/0:24,0:24:60.17:0,60,1259	0/0:23,0:23:66.23:0,66,1438	1/1:0,4:4:9.03:142,9,0	0/0:13,0:13:36.08:0,36,690
chr10	103224611	.	AGC	A	823.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.394;DP=638;FS=0.000;HRun=0;HaplotypeScore=76.9540;InbreedingCoeff=0.9667;MQ=82.65;MQ0=0;MQRankSum=-2.703;QD=35.81;ReadPosRankSum=2.381;VQSLOD=5.9478;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,2279	0/0:18,0:18:51.17:0,51,964	0/0:12,0:12:29.85:0,30,510	0/0:23,0:23:63.21:0,63,1164	0/0:19,0:19:54.14:0,54,991	0/0:15,0:15:45.15:0,45,868	0/0:38,0:38:99:0,114,2201	0/0:20,0:20:57.19:0,57,1056	0/0:17,0:17:51.17:0,51,984	0/0:15,0:15:39.13:0,39,751	0/0:8,0:8:24.08:0,24,463	0/0:37,0:37:99:0,111,2090	0/0:26,0:26:72.25:0,72,1375	0/0:34,0:34:96.32:0,96,1799	1/1:1,22:23:60.20:918,60,0	0/0:15,0:15:42.14:0,42,787	0/0:34,0:34:99:0,102,1938	0/0:20,0:20:57.20:0,57,1100	0/0:17,0:17:48.16:0,48,926	0/0:14,0:14:42.14:0,42,781	0/0:75,0:75:99:0,223,4117	0/0:15,0:15:45.15:0,45,857	0/0:9,0:9:27.08:0,27,488	0/0:33,0:33:93.79:0,94,1779	0/0:14,0:14:36.12:0,36,695	0/0:20,0:20:60.21:0,60,1158	0/0:23,0:23:69.24:0,69,1328	0/0:4,0:4:12.04:0,12,210
chr10	103225611	.	C	CTCCCCCAG	9104.62	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-8.033;DP=262;FS=3.500;HRun=0;HaplotypeScore=62.5742;InbreedingCoeff=0.8722;MQ=97.40;MQ0=0;MQRankSum=-10.671;QD=68.46;ReadPosRankSum=2.923;VQSLOD=4.3448;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,12:20:30.57:1162,31,0	1/1:0,2:2:6.02:255,6,0	0/0:21,0:21:35.98:0,36,678	0/0:10,0:10:21.07:0,21,430	0/0:5,0:5:15.05:0,15,368	1/1:4,5:10:15.05:636,15,0	1/1:6,4:11:9.03:383,9,0	0/0:11,0:11:27.09:0,27,714	1/1:3,8:11:24.07:920,24,0	0/0:12,0:12:27.09:0,27,719	0/0:5,0:5:9.03:0,9,236	0/0:10,0:10:18.06:0,18,479	1/1:2,7:9:24.08:1002,24,0	1/1:10,13:23:36.12:1530,36,0	0/0:1,0:1:3.01:0,3,80	0/0:3,0:3:9.03:0,9,240	1/1:4,4:8:9.03:383,9,0	1/1:3,5:8:15.05:639,15,0	0/0:9,0:9:24.08:0,24,615	0/0:5,0:5:12.04:0,12,320	0/0:16,0:16:36.12:0,36,959	1/1:3,5:8:15.05:638,15,0	1/1:1,5:8:14.96:638,15,0	1/1:6,1:7:8.48:280,8,0	1/1:3,5:8:15.05:638,15,0	0/0:5,0:5:4.26:0,4,157	0/0:8,0:8:18.06:0,18,479	0/0:8,0:8:9.03:0,9,240
chr10	103225846	.	CTTT	C	1456.46	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.540;DP=376;FS=27.886;HRun=11;HaplotypeScore=64.9562;InbreedingCoeff=0.9189;MQ=78.18;MQ0=0;MQRankSum=-1.589;QD=24.27;ReadPosRankSum=-0.871;VQSLOD=0.1426;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:37:87.27:0,87,1671	0/0:2,0:2:3.01:0,3,61	0/0:12,0:13:26.98:0,27,367	0/0:13,0:13:12.99:0,13,220	0/0:9,0:12:36.01:0,36,524	0/0:11,0:12:33.10:0,33,594	0/0:18,0:18:51.11:0,51,939	1/1:4,13:17:39.08:496,39,0	0/0:16,0:16:45.13:0,45,812	0/0:18,0:18:39.13:0,39,788	0/0:10,0:10:30.09:0,30,572	0/0:11,0:12:36.11:0,36,648	0/0:15,0:15:42.08:0,42,720	0/0:10,0:10:24.08:0,24,469	0/0:1,0:3:5.98:0,6,46	0/0:12,0:12:33.07:0,33,626	0/0:21,0:21:63.20:0,63,1237	0/0:20,0:20:54.16:0,54,1051	1/1:0,9:9:23.31:264,23,0	1/1:0,7:7:18.04:236,18,0	1/1:7,15:22:36.03:473,36,0	0/0:11,0:11:27.08:0,27,512	0/0:8,0:8:18.06:0,18,364	0/0:19,0:19:54.18:0,54,1070	0/0:15,0:15:45.11:0,45,869	0/0:9,0:9:24.07:0,24,449	1/1:1,4:5:12.03:158,12,0	0/0:9,0:9:27.09:0,27,546
chr10	103225945	.	CAGAGAGAG	C	2070.50	PASS	AB=0.902;AC=20;AF=0.455;AN=44;BaseQRankSum=6.116;DP=433;FS=5.514;HRun=0;HaplotypeScore=113.1188;InbreedingCoeff=0.6909;MQ=77.61;MQ0=6;MQRankSum=-6.012;QD=9.24;ReadPosRankSum=0.652;VQSLOD=2.0645;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,7:41:18.68:351,0,19	./.	0/1:36,0:26:0:0,0,0	./.	0/0:11,0:11:6.02:0,6,168	1/1:13,1:16:9.03:184,9,0	1/1:17,5:23:8.99:208,9,0	0/0:25,0:24:12.93:0,13,419	1/1:15,6:22:17.27:360,17,0	0/0:13,0:14:15.03:0,15,370	./.	0/0:10,0:10:21.07:0,21,809	1/1:7,0:16:15.05:279,15,0	1/1:8,4:14:12.04:240,12,0	0/0:18,0:18:9.48:0,9,202	0/0:7,0:9:12.04:0,12,378	1/1:11,7:19:18.06:393,18,0	1/1:10,1:10:3.01:75,3,0	0/0:10,0:10:10.07:0,10,229	./.	0/0:21,0:21:24.05:0,24,673	./.	./.	1/1:13,5:18:3:75,3,0	1/1:7,1:8:3.01:72,3,0	0/0:14,0:14:18.06:0,18,475	0/0:11,0:11:18.06:0,18,615	0/0:3,0:4:9.01:0,9,210
chr10	103226245	.	T	TG	1063.70	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-5.730;DP=318;FS=25.727;HRun=8;HaplotypeScore=40.1738;InbreedingCoeff=0.8799;MQ=88.26;MQ0=1;MQRankSum=0.056;QD=17.44;ReadPosRankSum=-3.374;VQSLOD=1.2993;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.03:0,57,522	0/0:2,0:2:6:0,6,55	0/0:15,0:15:26.98:0,27,241	0/0:11,0:12:14.87:0,15,162	0/0:14,0:13:33.01:0,33,301	0/0:11,0:11:18:0,18,164	0/0:19,0:19:36:0,36,329	1/1:4,10:14:27.07:302,27,0	0/0:17,0:17:45.02:0,45,412	0/0:9,0:9:21:0,21,192	0/0:3,0:3:9:0,9,82	0/0:13,0:13:33.01:0,33,302	0/0:12,0:12:27.01:0,27,247	0/0:9,0:9:18:0,18,162	1/1:0,0:3:8.52:43,9,0	0/0:14,0:14:33.01:0,33,302	0/0:16,0:16:42.02:0,42,384	0/0:11,0:11:27.01:0,27,247	1/1:4,5:9:14.99:146,15,0	1/1:0,3:3:6.02:69,6,0	1/1:4,22:25:48.11:540,48,0	0/0:3,0:3:9:0,9,82	0/0:2,0:2:6:0,6,55	0/0:16,0:16:33:0,33,302	0/0:16,0:16:24.01:0,24,220	0/0:13,0:13:30.01:0,30,274	1/1:1,5:6:12.04:138,12,0	0/0:9,0:9:14.99:0,15,137
chr10	103226485	.	T	TTATC	6471.03	PASS	AB=0.737;AC=30;AF=0.577;AN=52;BaseQRankSum=3.023;DP=393;FS=0.000;HRun=0;HaplotypeScore=115.1033;InbreedingCoeff=0.8345;MQ=61.09;MQ0=3;MQRankSum=-6.203;QD=25.99;ReadPosRankSum=-2.032;VQSLOD=4.3408;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,8:14:21.03:423,21,0	1/1:2,5:7:11.97:291,12,0	0/0:16,0:11:13.79:0,14,232	0/0:16,0:14:24:0,24,312	0/0:17,0:17:27.09:0,27,439	1/1:8,12:20:30.08:672,30,0	1/1:13,7:20:15.02:268,15,0	1/1:22,1:23:6.01:101,6,0	1/1:3,6:9:17.53:326,18,0	0/0:13,0:13:27.08:0,27,420	0/0:6,0:6:12.02:0,12,171	0/0:8,0:8:18.06:0,18,295	1/1:6,5:11:21.07:426,21,0	1/1:4,14:17:30.09:678,30,0	0/0:16,0:16:27.05:0,27,430	0/0:8,0:8:15.03:0,15,214	1/1:11,10:21:27.09:630,27,0	0/1:13,10:22:7.05:829,0,7	1/1:10,4:14:27.04:544,27,0	1/1:3,4:7:3.01:73,3,0	./.	./.	0/1:5,2:7:0:0,0,0	1/1:10,9:18:12:239,12,0	1/1:7,11:18:12.03:243,12,0	0/0:20,0:20:42.14:0,42,687	1/1:6,12:18:30.10:727,30,0	0/0:17,0:17:36.12:0,36,590
chr10	103226521	.	TGTGC	T	1978.73	PASS	AB=0.978;AC=25;AF=0.463;AN=54;BaseQRankSum=9.770;DP=470;FS=1.607;HRun=0;HaplotypeScore=152.8378;InbreedingCoeff=0.2679;MQ=52.46;MQ0=10;MQRankSum=-4.855;QD=6.78;ReadPosRankSum=7.428;VQSLOD=2.1732;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:0.81:89,0,1	0/0:8,1:9:2.31:0,2,73	0/0:38,0:15:24.91:0,25,286	0/0:49,0:23:54.52:0,55,627	0/0:11,0:11:27.03:0,27,409	0/1:14,2:16:50.82:104,0,51	1/1:20,1:18:24.75:163,25,0	0/1:17,0:17:49.94:283,0,50	0/1:11,0:11:50.44:68,0,50	0/0:15,0:15:41.95:0,42,664	0/0:3,0:3:9.03:0,9,114	0/0:16,0:16:45.12:0,45,791	1/1:13,1:14:13.56:109,14,0	0/1:23,1:23:14.74:200,0,15	0/1:16,0:15:26.13:30,0,26	0/0:6,0:6:15.04:0,15,208	0/1:19,1:20:46.37:59,0,46	0/1:27,0:27:45.33:204,0,45	1/1:19,0:18:13.41:232,13,0	1/1:5,0:5:2.60:10,3,0	1/1:28,0:24:30.42:205,30,0	./.	1/1:5,0:4:2.66:15,3,0	0/1:19,0:18:52.10:52,0,55	1/1:15,1:16:14.44:105,14,0	0/0:16,0:15:36.11:0,36,527	1/1:17,0:17:29.12:234,29,0	0/0:14,0:14:30.08:0,30,428
chr10	103226523	.	TGC	T	4191.55	PASS	AB=0.759;AC=24;AF=0.444;AN=54;BaseQRankSum=7.454;DP=467;FS=2.790;HRun=0;HaplotypeScore=132.8691;InbreedingCoeff=0.1395;MQ=52.42;MQ0=11;MQRankSum=-3.750;QD=14.07;ReadPosRankSum=4.998;VQSLOD=3.7765;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:7,10:17:20.92:271,0,21	0/1:3,6:9:28.97:181,0,29	0/0:38,0:14:0.87:0,1,346	0/0:49,0:22:47.73:0,48,687	0/0:11,0:11:27.03:0,27,426	1/1:4,12:16:2.13:311,2,0	1/1:6,15:18:33.72:470,34,0	0/1:17,0:17:25.77:80,0,26	0/1:4,9:13:75.33:290,0,75	0/0:15,0:15:41.91:0,42,669	0/0:3,0:3:9.03:0,9,152	0/0:17,0:17:23.25:0,23,719	1/1:3,11:14:17.77:364,18,0	1/1:5,20:23:18.59:576,19,0	0/1:15,1:15:24.31:24,0,62	0/0:5,0:5:15.02:0,15,209	0/1:9,12:21:32.84:399,0,33	0/1:11,15:26:12.72:651,0,13	0/1:16,1:16:25.86:64,0,26	0/0:5,0:5:1.19:0,1,3	1/1:28,0:24:8.62:75,9,0	./.	1/1:1,4:4:2.90:46,3,0	0/1:7,12:18:33.35:145,0,33	1/1:2,14:16:14.64:193,15,0	0/0:16,0:15:36.11:0,36,608	0/1:18,0:18:5.15:52,0,5	0/0:10,0:10:30.09:0,30,496
chr10	103226529	.	T	TGC	2026.09	PASS	AB=0.760;AC=9;AF=0.167;AN=54;BaseQRankSum=0.092;DP=480;FS=2.076;HRun=0;HaplotypeScore=143.6638;InbreedingCoeff=0.7460;MQ=49.88;MQ0=15;MQRankSum=-1.540;QD=22.02;ReadPosRankSum=-0.569;VQSLOD=3.7576;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:26.98:0,27,279	0/0:9,0:9:18.02:0,18,196	0/0:34,0:10:24.04:0,24,309	0/0:46,0:17:35.73:0,36,432	0/0:9,0:9:21.06:0,21,283	0/0:18,0:18:35.93:0,36,328	0/0:24,0:21:26.95:0,27,306	0/1:13,5:19:41.14:487,0,41	0/0:14,0:13:32.79:0,33,352	0/0:15,0:15:42.13:0,42,585	0/0:3,0:3:6.02:0,6,86	0/0:20,0:20:57.12:0,57,723	0/0:13,0:13:29.86:0,30,268	0/0:27,0:25:50.57:0,51,492	0/0:14,0:13:26.81:0,27,335	0/0:5,0:5:15.04:0,15,197	0/0:22,0:22:47.60:0,48,488	0/0:26,0:26:58.96:0,59,589	1/1:7,11:17:41.62:575,42,0	1/1:4,1:5:3.01:55,3,0	1/1:10,21:26:22.97:545,23,0	./.	0/0:6,0:5:3.38:0,3,35	0/0:22,0:21:23.90:0,24,226	0/0:17,0:17:15.89:0,16,147	0/0:15,0:14:33.08:0,33,423	1/1:7,12:19:27.75:519,28,0	0/0:11,0:11:33.03:0,33,393
chr10	103226531	.	CGTGT	C	1925.19	PASS	AB=0.826;AC=9;AF=0.167;AN=54;BaseQRankSum=1.696;DP=486;FS=2.838;HRun=0;HaplotypeScore=155.9739;InbreedingCoeff=0.7388;MQ=47.27;MQ0=18;MQRankSum=-0.381;QD=21.88;ReadPosRankSum=0.420;VQSLOD=3.6560;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:23.15:0,23,251	0/0:9,0:9:17.40:0,17,253	0/0:36,0:9:24.06:0,24,319	0/0:44,0:16:37.31:0,37,439	0/0:9,0:9:21.07:0,21,399	0/0:18,0:18:28.30:0,28,305	0/0:28,0:25:23.43:0,23,108	0/1:15,4:19:99:473,0,151	0/0:14,0:13:25.31:0,25,340	0/0:15,0:15:42.13:0,42,842	0/0:3,0:3:6.02:0,6,86	0/0:22,0:22:63.11:0,63,1148	0/0:13,0:13:15.06:0,15,168	0/0:27,0:25:21.15:0,21,364	0/0:14,0:13:17.52:0,18,164	0/0:6,0:6:18.03:0,18,323	0/0:23,0:23:41.55:0,42,606	0/0:25,0:25:60.96:0,61,591	1/1:14,1:15:37.33:499,37,0	1/1:2,2:4:3.01:35,3,0	1/1:29,1:26:27.71:508,28,0	./.	0/0:6,0:5:2.34:0,2,8	0/0:24,0:23:23.94:0,24,356	0/0:17,0:17:11.47:0,11,70	0/0:14,0:13:36.11:0,36,567	1/1:16,3:19:39.12:564,39,0	0/0:11,0:11:33.08:0,33,494
chr10	103227306	.	T	TA	629.32	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.750;DP=598;FS=5.318;HRun=9;HaplotypeScore=65.9553;InbreedingCoeff=0.8548;MQ=78.11;MQ0=2;MQRankSum=-0.083;QD=26.22;ReadPosRankSum=-0.785;VQSLOD=4.0016;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:86.95:0,87,752	0/0:7,0:7:21:0,21,182	0/0:31,0:20:29.30:0,29,226	0/0:26,0:21:4.61:0,5,136	0/0:33,0:33:92.89:0,93,789	0/0:24,0:24:53.97:0,54,469	0/0:12,0:12:29.99:0,30,260	0/0:26,0:26:65.98:0,66,570	0/0:17,0:17:44.98:0,45,391	0/0:24,0:24:62.97:0,63,545	0/0:30,0:30:83.97:0,84,726	0/0:18,0:18:47.99:0,48,417	0/0:11,0:11:29.97:0,30,256	0/0:26,0:26:67.79:0,68,578	1/1:1,23:23:66.17:724,66,0	0/0:13,0:13:32.99:0,33,286	0/0:28,0:28:74.93:0,75,641	0/0:24,0:24:62.94:0,63,540	0/0:32,0:32:80.96:0,81,702	0/0:26,0:26:33.97:0,34,515	0/0:8,0:8:21:0,21,182	0/0:7,0:7:14.98:0,15,128	0/0:23,0:23:44.96:0,45,386	0/0:6,0:6:18:0,18,156	0/0:23,0:23:65.94:0,66,562	0/0:24,0:24:68.98:0,69,599	0/0:22,0:22:62.97:0,63,543	0/0:18,0:18:50.99:0,51,442
chr10	103229163	.	G	GT	145.91	PASS	AC=16;AF=0.889;AN=18;DP=33;FS=0.000;HRun=0;HaplotypeScore=21.2014;MQ=39.32;MQ0=0;QD=8.11;VQSLOD=2.9962;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	./.	1/1:1,2:3:2.98:21,3,0	1/1:2,0:2:2.96:19,3,0	0/0:4,0:4:0:0,0,0	1/1:2,0:2:3:25,3,0	1/1:3,0:3:5.99:49,6,0	./.	./.	./.	./.	./.	1/1:0,1:1:2.98:21,3,0	./.	./.	1/1:0,0:1:2.94:18,3,0	./.	1/1:2,1:3:5:26,5,0	./.	1/1:3,0:3:5.89:39,6,0	./.	./.
chr10	103230294	.	CAA	C	1630.73	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=5.456;DP=472;FS=4.547;HRun=14;HaplotypeScore=65.9513;InbreedingCoeff=0.8933;MQ=53.81;MQ0=20;MQRankSum=-1.075;QD=15.53;ReadPosRankSum=1.185;VQSLOD=2.7966;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:30:45.58:0,46,808	0/0:9,0:11:17.55:0,18,217	0/0:10,0:6:0.66:0,1,79	0/0:5,0:4:2.96:0,3,40	0/0:16,0:15:28.28:0,28,304	0/0:13,0:13:24.08:0,24,337	0/0:14,1:17:16.30:0,16,448	1/1:8,19:26:53.70:483,54,0	0/0:16,0:15:35.91:0,36,397	0/0:9,0:8:15.05:0,15,210	0/0:15,0:20:41.56:0,42,491	0/0:10,0:10:23.97:0,24,289	0/0:9,0:10:20.33:0,20,209	0/0:19,0:20:47.85:0,48,498	./.	0/0:8,0:11:24.08:0,24,323	0/0:35,0:36:87.44:0,87,1065	0/0:29,0:31:70.29:0,70,841	1/1:8,12:20:29.46:351,29,0	1/1:3,11:15:32.69:289,33,0	1/1:4,12:16:26.69:234,27,0	0/0:8,0:7:15.01:0,15,176	0/0:10,0:12:26.55:0,27,271	0/0:27,0:29:52.93:0,53,660	0/0:10,0:11:29.53:0,30,362	0/0:17,0:17:44.58:0,45,550	1/1:6,16:21:47.97:444,48,0	0/0:16,0:16:29.54:0,30,366
chr10	103230873	.	G	GT	466.69	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.630;DP=632;FS=4.314;HRun=2;HaplotypeScore=63.6911;InbreedingCoeff=0.9965;MQ=66.22;MQ0=3;MQRankSum=-3.293;QD=22.22;ReadPosRankSum=-0.524;VQSLOD=3.3275;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,129,1551	0/0:8,0:8:24.08:0,24,297	0/0:17,0:13:33.56:0,34,427	0/0:26,0:22:51.15:0,51,615	0/0:30,0:30:87.27:0,87,1078	0/0:16,0:16:45.14:0,45,558	0/0:28,0:28:78.23:0,78,945	0/0:27,0:26:75.23:0,75,919	0/0:23,0:23:69.20:0,69,841	0/0:20,0:20:60.18:0,60,736	0/0:21,0:21:63.20:0,63,780	0/0:22,0:22:60.18:0,60,732	0/0:14,0:14:36.11:0,36,445	0/0:16,0:16:48.15:0,48,594	1/1:3,18:21:60.03:562,60,0	0/0:30,0:30:84.26:0,84,1041	0/0:39,0:39:99:0,114,1363	0/0:21,0:21:60.15:0,60,727	0/0:17,0:16:45.13:0,45,546	0/0:18,0:18:51.10:0,51,600	0/0:34,0:34:96.30:0,96,1190	0/0:9,0:9:27.07:0,27,321	0/0:17,0:17:48.15:0,48,595	0/0:28,0:28:81.23:0,81,980	0/0:15,0:15:45.14:0,45,558	0/0:21,0:21:63.19:0,63,771	0/0:31,0:31:87.26:0,87,1065	0/0:16,0:16:48.15:0,48,595
chr10	103230876	.	C	CAGT	955.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.846;DP=636;FS=2.029;HRun=0;HaplotypeScore=89.7657;InbreedingCoeff=0.9968;MQ=68.31;MQ0=2;MQRankSum=-2.980;QD=45.50;ReadPosRankSum=0.849;VQSLOD=5.5417;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,2404	0/0:8,0:8:24.08:0,24,448	0/0:20,0:15:45.14:0,45,783	0/0:25,0:22:56.92:0,57,1033	0/0:30,0:30:87.30:0,87,1607	0/0:18,0:18:51.16:0,51,901	0/0:27,0:27:81.28:0,81,1482	0/0:27,0:26:78.27:0,78,1440	0/0:22,0:22:66.23:0,66,1229	0/0:22,0:22:60.20:0,60,1091	0/0:21,0:21:63.22:0,63,1134	0/0:21,0:21:63.20:0,63,1131	0/0:14,0:14:39.13:0,39,721	0/0:16,0:16:48.16:0,48,895	1/1:3,18:21:39.77:1050,40,0	0/0:29,0:29:87.30:0,87,1621	0/0:39,0:39:99:0,114,2042	0/0:21,0:21:60.21:0,60,1117	0/0:16,0:16:42.14:0,42,783	0/0:18,0:18:48.16:0,48,858	0/0:35,0:35:99:0,102,1857	0/0:9,0:9:27.09:0,27,498	0/0:17,0:17:48.16:0,48,894	0/0:29,0:29:84.27:0,84,1513	0/0:15,0:15:45.15:0,45,839	0/0:23,0:23:66.20:0,66,1158	0/0:29,0:29:87.30:0,87,1620	0/0:17,0:17:51.17:0,51,938
chr10	103230999	.	A	AAC	450.12	PASS	AB=0.960;AC=12;AF=0.214;AN=56;BaseQRankSum=3.556;DP=496;FS=9.098;HRun=0;HaplotypeScore=73.6459;InbreedingCoeff=-0.2923;MQ=67.01;MQ0=1;MQRankSum=-0.334;QD=2.45;ReadPosRankSum=2.250;VQSLOD=0.4791;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:99:102,0,150	0/1:8,0:9:46.40:46,0,50	0/0:21,0:13:23.36:0,23,185	0/1:22,0:15:12.49:12,0,163	0/0:22,0:22:52.33:0,52,523	0/0:8,0:8:1.95:0,2,82	0/1:12,0:11:26.26:26,0,99	0/0:27,0:26:36.09:0,36,361	0/1:10,0:10:30.84:31,0,90	0/0:33,0:33:77.17:0,77,837	0/0:23,0:23:66.03:0,66,642	0/0:20,0:20:41:0,41,415	0/1:7,0:7:10.06:10,0,15	0/1:15,0:15:30.06:30,0,127	0/0:19,0:19:37.39:0,37,248	0/0:15,0:15:35.78:0,36,387	0/1:20,0:19:36.20:36,0,172	0/1:7,0:7:43.72:44,0,49	0/0:14,0:14:18.22:0,18,184	0/1:24,0:24:29.59:30,0,66	0/0:13,0:13:11.25:0,11,71	0/1:6,9:16:73.16:123,0,73	0/0:13,0:13:16:0,16,186	0/0:16,0:16:0.87:0,1,82	0/1:17,0:17:99:106,0,131	0/0:30,0:30:88.13:0,88,812	0/0:23,0:23:17.19:0,17,160	0/0:15,0:15:37.83:0,38,376
chr10	103231000	.	A	AC	355.54	PASS	AB=0.962;AC=10;AF=0.179;AN=56;BaseQRankSum=1.685;DP=503;FS=18.414;HRun=0;HaplotypeScore=68.8772;InbreedingCoeff=-0.2061;MQ=67.86;MQ0=1;MQRankSum=-3.205;QD=2.49;ReadPosRankSum=1.196;VQSLOD=1.1485;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:94.44:94,0,170	0/1:10,0:10:44.57:45,0,53	0/0:22,0:14:16.18:0,16,153	0/0:22,0:15:22.65:0,23,176	0/0:22,0:22:59.60:0,60,519	0/0:5,3:8:11.70:0,12,95	0/1:13,0:12:26.19:26,0,103	0/0:28,0:27:61.62:0,62,453	0/1:11,0:11:30.76:31,0,93	0/0:33,0:33:91.80:0,92,893	0/0:23,0:23:66:0,66,636	0/0:19,0:19:48.78:0,49,442	0/1:3,5:8:0.12:0,0,16	0/1:15,0:15:30.01:30,0,131	0/0:19,0:19:47.17:0,47,324	0/0:15,0:15:43.41:0,43,406	0/1:19,0:18:36.58:37,0,177	0/1:7,0:7:35.55:36,0,62	0/0:14,0:14:35.69:0,36,259	0/0:24,0:24:56.03:0,56,302	0/0:13,0:13:16.38:0,16,108	0/1:17,0:17:78.52:99,0,79	0/0:13,0:13:16.02:0,16,188	0/0:13,4:17:16.17:0,16,130	0/1:17,0:17:98.37:98,0,161	0/0:31,0:31:88.10:0,88,797	0/0:23,0:23:26.80:0,27,199	0/0:14,0:14:36.07:0,36,347
chr10	103232198	.	C	CCG	1419.78	PASS	AB=0.900;AC=30;AF=0.556;AN=54;BaseQRankSum=-1.281;DP=174;FS=0.000;HRun=0;HaplotypeScore=41.5974;InbreedingCoeff=0.4245;MQ=57.73;MQ0=22;MQRankSum=-0.348;QD=11.36;ReadPosRankSum=1.862;VQSLOD=2.6166;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:6:2.84:14,3,0	0/0:3,0:3:3.85:0,4,22	0/1:15,0:4:0.16:0,0,55	0/0:12,0:7:5.78:0,6,65	1/1:8,6:14:14.05:191,14,0	0/0:3,0:3:5.91:0,6,38	0/0:3,0:3:2.97:0,3,20	0/1:8,1:8:25.28:58,0,25	0/0:1,0:1:2.97:0,3,20	1/1:5,2:6:10.44:152,10,0	0/1:4,3:7:7.91:38,0,8	1/1:3,1:4:5.90:88,6,0	0/0:6,0:6:0.96:0,1,55	0/0:2,0:2:5.91:0,6,38	0/0:5,0:4:8.35:0,8,31	1/1:2,3:4:11.98:125,12,0	1/1:7,0:5:5.92:39,6,0	0/0:5,0:5:4.96:0,5,19	1/1:2,2:4:12.03:146,12,0	1/1:2,3:4:9.02:118,9,0	1/1:7,1:8:8.06:59,8,0	./.	0/1:3,0:3:10.05:10,0,32	1/1:6,0:4:2.97:20,3,0	0/0:4,0:4:5.92:0,6,38	1/1:9,4:12:29.78:297,30,0	1/1:4,1:5:9.03:116,9,0	1/1:3,3:4:9.03:119,9,0
chr10	103232213	.	AC	A	1720.12	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.245;DP=205;FS=21.133;HRun=1;HaplotypeScore=57.3501;InbreedingCoeff=0.4364;MQ=69.19;MQ0=23;MQRankSum=-2.684;QD=10.49;ReadPosRankSum=-0.704;VQSLOD=-0.0785;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,2:11:9.28:55,9,0	1/1:4,1:4:11.56:66,12,0	0/0:25,0:10:13.99:0,14,162	0/0:16,0:9:4.72:0,5,45	1/1:7,6:12:22.28:105,22,0	1/1:6,1:7:14.77:76,15,0	1/1:4,1:5:10.40:61,10,0	1/1:1,1:7:13.59:135,14,0	1/1:4,0:3:5.77:27,6,0	1/1:3,4:7:15.64:110,16,0	1/1:1,1:1:2.74:12,3,0	1/1:0,2:2:5.93:49,6,0	1/1:2,0:2:5.93:40,6,0	1/1:3,0:3:5.88:36,6,0	1/1:4,0:4:8.87:58,9,0	1/1:3,5:7:17.39:122,17,0	1/1:7,0:5:7.72:43,8,0	1/1:5,0:4:5.96:52,6,0	1/1:3,3:6:17.71:139,18,0	1/1:4,2:5:10.86:52,11,0	1/1:5,1:6:12.85:65,13,0	1/1:4,1:4:5.85:34,6,0	1/1:3,0:3:2.92:17,3,0	1/1:10,0:8:11.61:59,12,0	1/1:9,1:10:20.95:107,21,0	1/1:3,5:8:18.54:145,19,0	1/1:6,3:9:6.53:105,7,0	1/1:4,5:5:6.07:67,6,0
chr10	103232215	.	AGG	A	3073.86	PASS	AB=0.615;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.800;DP=203;FS=11.761;HRun=2;HaplotypeScore=55.5013;InbreedingCoeff=0.4182;MQ=71.79;MQ0=21;MQRankSum=-4.425;QD=18.74;ReadPosRankSum=0.069;VQSLOD=-0.1334;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:11:10.27:114,10,0	1/1:0,5:4:12.03:143,12,0	0/0:22,0:11:15.82:0,16,223	0/0:16,0:9:4.67:0,5,41	1/1:4,9:12:27.76:209,28,0	1/1:6,1:7:20.86:167,21,0	1/1:5,1:6:11.01:117,11,0	1/1:5,2:7:18.48:184,18,0	1/1:4,0:3:8.92:63,9,0	1/1:0,7:7:18.03:210,18,0	1/1:1,1:1:2.99:24,3,0	1/1:0,2:2:6.02:69,6,0	1/1:2,0:2:5.98:46,6,0	1/1:0,3:3:6.02:74,6,0	1/1:0,4:4:9.03:117,9,0	1/1:3,5:7:17.92:157,18,0	1/1:5,2:5:8.98:83,9,0	1/1:2,3:4:6.01:65,6,0	1/1:3,3:6:18.01:182,18,0	1/1:5,1:5:14.93:125,15,0	1/1:2,4:6:13.24:134,13,0	1/1:0,5:4:6.02:72,6,0	1/1:0,3:3:3.01:36,3,0	1/1:1,9:8:14.59:138,15,0	1/1:5,5:10:26.89:253,27,0	0/1:3,5:8:6.14:150,0,6	1/1:8,0:9:18.56:150,19,0	1/1:3,5:5:11.54:112,12,0
chr10	103233466	.	TC	T	1319.93	PASS	AB=1.000;AC=31;AF=0.775;AN=40;BaseQRankSum=-0.141;DP=102;FS=6.285;HRun=1;HaplotypeScore=51.6211;InbreedingCoeff=0.2777;MQ=83.31;MQ0=3;MQRankSum=-2.862;QD=19.13;ReadPosRankSum=1.316;VQSLOD=3.6922;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:8:20.94:174,21,0	./.	0/0:8,0:6:0.64:0,1,113	0/0:14,0:4:6.31:0,6,89	./.	1/1:2,5:7:20.92:185,21,0	1/1:0,1:1:2.97:20,3,0	1/1:0,5:4:11.96:112,12,0	1/1:1,1:2:6:52,6,0	0/1:2,0:2:3.86:15,0,4	./.	0/1:5,0:5:10.96:11,0,14	1/1:1,1:2:3:27,3,0	1/1:0,2:2:6:54,6,0	1/1:0,3:2:6.01:63,6,0	0/1:2,0:2:4.21:15,0,4	1/1:3,10:12:29.96:270,30,0	1/1:0,4:4:12.02:122,12,0	1/1:0,3:3:8.99:92,9,0	./.	1/1:1,0:1:2.96:19,3,0	./.	./.	1/1:0,5:5:12.03:141,12,0	./.	0/0:3,0:3:4.29:0,4,18	1/1:1,2:3:6.49:67,6,0	./.
chr10	103233472	.	TC	T	983.45	PASS	AB=0.889;AC=31;AF=0.775;AN=40;BaseQRankSum=0.547;DP=111;FS=14.026;HRun=3;HaplotypeScore=51.9993;InbreedingCoeff=0.3630;MQ=77.21;MQ0=3;MQRankSum=-3.816;QD=12.77;ReadPosRankSum=0.577;VQSLOD=0.9650;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,8:9:17.88:129,18,0	./.	0/0:7,0:4:11.87:0,12,139	0/0:17,0:5:11.20:0,11,162	./.	1/1:2,2:7:17.53:109,18,0	./.	1/1:5,0:4:8.92:88,9,0	1/1:1,1:3:5.95:42,6,0	0/1:1,0:2:6.66:13,0,7	./.	0/1:5,0:5:9.65:10,0,22	1/1:3,1:4:5.96:43,6,0	1/1:0,2:2:5.97:44,6,0	1/1:0,2:2:5.86:37,6,0	0/1:2,0:2:8.12:12,0,8	1/1:5,10:14:32.80:244,33,0	1/1:3,3:6:11.97:95,12,0	1/1:3,0:3:6.02:71,6,0	./.	1/1:0,0:1:2.96:19,3,0	./.	./.	1/1:1,3:5:11.74:72,12,0	./.	0/0:2,0:2:5.49:0,5,24	1/1:3,0:3:6.90:67,7,0	1/1:1,0:1:2.98:22,3,0
chr10	103234352	.	A	AACACACAC	3870.60	PASS	AC=28;AF=0.538;AN=52;BaseQRankSum=-1.161;DP=727;FS=7.601;HRun=0;HaplotypeScore=209.2533;InbreedingCoeff=0.7844;MQ=52.35;MQ0=26;MQRankSum=-7.296;QD=11.35;ReadPosRankSum=-5.215;VQSLOD=-0.2367;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,5:36:3.01:37,3,0	1/1:12,0:12:6.02:190,6,0	./.	./.	0/0:16,0:17:12.04:0,12,276	1/1:16,0:20:6.49:180,6,0	1/1:33,0:36:17.08:373,17,0	1/1:22,0:22:2.22:7,2,0	1/1:15,3:20:9.03:278,9,0	0/0:19,0:21:6.99:0,7,505	0/0:9,0:9:5.98:0,6,95	0/0:21,0:22:39.57:0,40,810	1/1:9,7:17:9.03:287,9,0	1/1:13,2:15:6.49:215,6,0	0/0:9,0:14:3.01:0,3,56	0/0:25,0:27:41.93:0,42,819	1/1:23,9:36:15.05:388,15,0	1/1:16,3:19:9.03:313,9,0	0/0:20,0:20:17.79:0,18,305	0/0:22,0:22:30.57:0,31,552	0/0:44,0:43:30.62:0,31,501	1/1:19,1:26:12.04:357,12,0	1/1:12,4:14:6.02:222,6,0	1/1:31,1:31:24.02:470,24,0	1/1:17,4:21:15.52:553,16,0	0/0:20,0:21:9.59:0,10,216	0/0:25,0:25:45.43:0,45,758	0/0:23,0:26:17.09:0,17,824
chr10	103234354	.	CA	C	241.70	PASS	AB=0.748;AC=4;AF=0.071;AN=56;BaseQRankSum=7.346;DP=743;FS=2.951;HRun=2;HaplotypeScore=130.7855;InbreedingCoeff=-0.0788;MQ=50.31;MQ0=28;MQRankSum=0.613;QD=2.12;ReadPosRankSum=3.969;VQSLOD=-0.1701;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:36:53.14:0,53,643	0/0:11,0:11:15.05:0,15,199	0/0:64,0:20:57.04:0,57,674	0/0:57,0:18:51.16:0,51,651	0/0:17,0:17:50.16:0,50,618	0/0:21,0:20:35.58:0,36,394	0/0:36,0:36:66.47:0,66,824	0/0:20,0:20:45.15:0,45,270	0/0:19,0:19:30.09:0,30,371	0/0:23,0:23:58.31:0,58,767	0/0:8,0:8:21.07:0,21,293	0/0:24,0:24:67.59:0,68,924	0/0:18,0:17:15.51:0,16,173	0/0:16,0:15:25.39:0,25,271	0/0:14,0:14:18.94:0,19,231	0/0:30,0:30:73.53:0,74,1033	0/0:38,0:37:45.86:0,46,481	0/0:20,0:20:48.11:0,48,592	0/1:16,5:21:69.58:70,0,130	0/1:13,6:22:54.91:55,0,99	0/1:34,8:43:45.85:46,0,224	0/0:27,0:26:51.07:0,51,614	0/0:17,0:14:19.76:0,20,227	0/0:33,0:31:59.84:0,60,737	0/0:28,0:25:50.57:0,51,561	0/0:21,0:20:57.35:0,57,728	0/1:13,13:27:64.37:181,0,64	0/0:28,0:28:65.90:0,66,915
chr10	103235070	.	A	AT	975.82	PASS	AB=0.905;AC=16;AF=0.286;AN=56;BaseQRankSum=7.487;DP=546;FS=6.099;HRun=12;HaplotypeScore=64.0660;InbreedingCoeff=0.5220;MQ=59.55;MQ0=3;MQRankSum=0.997;QD=4.52;ReadPosRankSum=-0.441;VQSLOD=1.1297;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,1:30:21.83:0,22,451	0/0:15,0:15:32.77:0,33,241	0/0:12,0:10:23.83:0,24,173	0/0:12,0:7:10.63:0,11,61	0/1:15,1:16:2.16:2,0,148	0/0:12,0:12:23.83:0,24,175	0/1:21,3:26:26.81:27,0,299	1/1:18,0:18:22.40:111,22,0	0/0:28,0:29:58.02:0,58,408	0/0:15,1:20:6.69:0,7,185	0/0:19,0:20:39.84:0,40,274	0/0:13,0:13:19.62:0,20,127	0/0:19,0:21:42.80:0,43,296	0/0:27,1:28:21.43:0,21,321	0/1:10,0:10:8.26:8,0,110	0/0:12,0:12:28.82:0,29,199	0/0:33,1:36:52.40:0,52,530	0/0:11,0:13:33.88:0,34,231	1/1:17,0:15:17.82:165,18,0	1/1:24,0:24:49.22:282,49,0	1/1:28,0:28:49.81:285,50,0	0/0:20,0:20:47.69:0,48,348	0/0:16,0:16:32.75:0,33,241	0/1:20,2:23:8.89:9,0,248	0/1:17,7:24:18.37:18,0,205	0/0:19,0:18:29.16:0,29,216	1/1:21,0:21:43.48:248,43,0	0/1:8,1:9:2.32:2,0,148
chr10	103235081	.	T	TC	2726.31	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-6.622;DP=529;FS=6.095;HRun=0;HaplotypeScore=61.7406;InbreedingCoeff=0.9927;MQ=55.04;MQ0=20;MQRankSum=1.833;QD=26.99;ReadPosRankSum=0.636;VQSLOD=3.7463;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.15:0,87,1101	0/0:13,0:13:36.09:0,36,475	0/0:16,0:8:24.06:0,24,309	0/0:20,0:6:13.38:0,13,109	0/0:21,0:21:52.88:0,53,556	0/0:14,0:14:30.08:0,30,381	0/0:24,0:23:57.11:0,57,727	1/1:1,16:16:41.92:445,42,0	0/0:24,0:24:66.07:0,66,831	0/0:22,0:22:51.19:0,51,554	0/0:16,0:15:41.97:0,42,530	0/0:10,0:10:27.88:0,28,306	0/0:18,0:18:50.92:0,51,612	0/0:21,0:21:56.38:0,56,713	0/0:9,0:9:21.53:0,22,273	0/0:12,0:12:34.32:0,34,403	0/0:30,0:30:85.74:0,86,1109	0/0:14,0:14:41.93:0,42,492	1/1:1,16:16:43.01:545,43,0	1/1:1,22:23:54.05:665,54,0	1/1:5,20:25:51.13:672,51,0	0/0:23,0:22:60.04:0,60,732	0/0:14,0:14:42.05:0,42,519	0/0:24,0:24:48.36:0,48,663	0/0:23,0:23:34.60:0,35,532	0/0:16,0:15:45.06:0,45,526	1/1:0,17:18:45.09:574,45,0	0/0:11,0:11:28.76:0,29,377
chr10	103239393	.	CAAT	C	5523.78	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.552;DP=697;FS=8.905;HRun=0;HaplotypeScore=134.7363;InbreedingCoeff=0.9997;MQ=66.99;MQ0=1;MQRankSum=-3.670;QD=46.81;ReadPosRankSum=1.880;VQSLOD=6.7470;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,3219	0/0:13,0:13:39.13:0,39,961	0/0:24,0:24:66.15:0,66,1371	0/0:24,0:24:71.98:0,72,1448	0/0:25,0:25:66.19:0,66,1493	0/0:20,0:20:57.12:0,57,1297	0/0:20,0:20:60.21:0,60,1470	1/1:0,17:17:51.16:891,51,0	0/0:27,0:27:81.09:0,81,1685	0/0:31,0:31:93.32:0,93,2277	0/0:18,0:18:54.07:0,54,1170	0/0:26,0:26:78.15:0,78,1761	0/0:19,0:19:57.11:0,57,1295	0/0:17,0:17:50.96:0,51,955	0/0:30,0:30:90.14:0,90,1987	0/0:24,0:24:72.20:0,72,1695	0/0:35,0:35:99:0,105,2537	0/0:22,0:22:66.23:0,66,1627	1/1:0,11:11:27.09:502,27,0	1/1:0,18:18:45.15:837,45,0	1/1:0,43:42:96.33:1787,96,0	0/0:36,0:36:99:0,108,2479	0/0:21,0:21:60.09:0,60,1318	0/0:31,0:31:90.29:0,90,2144	0/0:18,0:18:54.19:0,54,1309	0/0:27,0:27:81.28:0,81,1994	1/1:0,29:29:81.28:1507,81,0	0/0:23,0:23:69.24:0,69,1660
chr10	103239941	.	G	GGA	10888.06	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-8.244;DP=823;FS=0.313;HRun=0;HaplotypeScore=143.4110;InbreedingCoeff=0.9796;MQ=90.34;MQ0=7;MQRankSum=-0.501;QD=36.41;ReadPosRankSum=3.569;VQSLOD=6.4601;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:33:81.28:1328,81,0	1/1:2,10:12:30.10:492,30,0	0/0:83,0:52:56.44:0,56,746	0/0:95,0:66:99:0,117,1268	0/0:27,0:27:57.15:0,57,680	1/1:7,21:29:23:898,23,0	1/1:6,18:24:51.17:837,51,0	0/0:38,0:37:69.21:0,69,845	1/1:5,28:33:81.28:1324,81,0	0/0:26,0:26:66.21:0,66,818	0/0:21,0:21:39.12:0,39,484	0/0:22,0:22:54.14:0,54,644	1/1:5,17:22:45.15:738,45,0	1/1:2,14:16:39.13:638,39,0	0/0:26,0:26:60.19:0,60,744	0/0:19,0:19:42.13:0,42,521	0/0:31,0:31:84.24:0,84,1027	1/1:6,18:25:54.66:886,55,0	0/0:18,0:18:45.14:0,45,558	0/0:24,0:24:57.18:0,57,707	0/0:31,0:31:57.18:0,57,706	1/1:6,25:32:66.23:1081,66,0	1/1:4,24:28:68.87:1130,69,0	1/1:3,21:24:57.19:935,57,0	1/1:4,16:20:4.94:601,5,0	0/0:22,0:22:51.15:0,51,621	0/0:31,0:31:44.97:0,45,558	0/0:8,0:8:15.04:0,15,186
chr10	103240908	.	G	GTT	11038.10	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-16.908;DP=560;FS=3.813;HRun=4;HaplotypeScore=60.2629;InbreedingCoeff=0.9573;MQ=83.13;MQ0=0;MQRankSum=-2.363;QD=46.97;ReadPosRankSum=1.197;VQSLOD=3.8905;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:38:99:1783,99,0	1/1:1,5:6:15.05:270,15,0	0/0:17,0:16:5.52:0,6,439	0/0:16,0:16:41.86:0,42,498	0/0:24,0:24:69.23:0,69,920	1/1:0,19:19:42.14:757,42,0	1/1:1,22:23:60.21:1077,60,0	0/0:25,0:25:75.25:0,75,997	1/1:1,15:16:39.13:702,39,0	0/0:16,0:16:45.15:0,45,600	0/0:8,0:8:24.07:0,24,305	0/0:24,0:24:69.20:0,69,889	1/1:0,14:14:42.14:756,42,0	1/1:1,15:16:45.15:810,45,0	0/0:19,0:19:57.19:0,57,760	0/0:21,1:22:3.14:0,3,666	0/0:37,0:37:99:0,102,1359	1/1:2,29:31:84.29:1512,84,0	0/0:27,0:27:69.22:0,69,915	0/0:23,0:23:63.17:0,63,800	0/0:23,0:23:69.21:0,69,903	1/1:0,14:15:42.14:724,42,0	1/1:1,14:15:39.13:703,39,0	1/1:1,21:23:60.21:1080,60,0	1/1:1,17:19:48.16:865,48,0	0/0:17,0:17:51.15:0,51,665	0/0:20,0:20:51.17:0,51,680	0/0:7,0:7:21.07:0,21,280
chr10	103241088	.	CTT	C	1682.37	PASS	AB=0.742;AC=31;AF=0.554;AN=56;BaseQRankSum=4.293;DP=472;FS=4.306;HRun=17;HaplotypeScore=80.4557;InbreedingCoeff=0.5582;MQ=71.88;MQ0=2;MQRankSum=0.015;QD=6.32;ReadPosRankSum=5.132;VQSLOD=0.0379;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:18,12:32:6.43:268,0,6	0/1:3,1:7:5.42:17,0,5	0/0:24,0:10:8.16:0,8,47	0/0:30,1:21:6.68:0,7,102	0/0:15,0:21:41.34:0,41,359	1/1:9,5:14:15.75:121,16,0	1/1:12,4:18:17.12:118,17,0	1/1:6,0:17:18.36:87,18,0	1/1:6,9:15:3.10:125,3,0	0/0:18,0:20:40.14:0,40,400	0/0:11,0:12:14.38:0,14,139	0/0:11,1:12:5.71:0,6,213	1/1:4,4:8:14.66:102,15,0	1/1:2,5:9:14.33:94,14,0	0/0:13,0:13:31.78:0,32,308	0/0:17,0:18:35.42:0,35,370	0/0:23,1:30:24.12:0,24,587	1/1:11,8:19:35.71:282,36,0	1/1:8,0:17:2.22:54,2,0	0/1:15,0:24:9.82:53,0,10	1/1:3,1:4:5.64:35,6,0	1/1:5,2:7:5.72:47,6,0	0/1:13,5:19:29.02:110,0,29	1/1:3,4:8:8.34:59,8,0	1/1:16,7:24:26.89:212,27,0	0/0:25,0:25:50.13:0,50,479	1/1:9,0:16:21.78:92,22,0	0/1:7,1:8:3.71:4,0,136
chr10	103242830	.	TGAGC	T	742.52	PASS	AB=0.856;AC=11;AF=0.196;AN=56;BaseQRankSum=8.233;DP=779;FS=2.285;HRun=0;HaplotypeScore=207.4759;InbreedingCoeff=-0.2434;MQ=51.03;MQ0=31;MQRankSum=-6.975;QD=2.35;ReadPosRankSum=-1.504;VQSLOD=2.6623;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,10:26:42.77:43,0,307	0/1:7,1:7:2.90:3,0,375	0/0:15,0:4:5.83:0,6,64	0/0:17,0:5:9.03:0,9,206	0/0:19,0:19:45.14:0,45,1048	0/1:17,2:15:99:102,0,287	0/1:49,3:36:19.07:19,0,1223	0/0:20,0:16:36.12:0,36,958	0/1:30,7:34:99:161,0,1176	0/0:23,0:23:63.22:0,63,1661	0/0:15,0:14:33.11:0,33,878	0/0:36,0:36:99:0,105,2791	0/1:19,6:23:99:120,0,498	0/1:31,6:31:99:275,0,920	0/0:28,0:28:78.27:0,78,2078	0/0:27,0:27:81.28:0,81,2046	0/0:31,0:31:90.31:0,90,2398	0/1:20,3:23:93.76:94,0,1259	0/0:24,0:17:45.15:0,45,1119	0/0:18,0:18:42.14:0,42,1066	0/0:118,0:115:99:0,316,8296	0/0:11,5:14:20.92:0,21,539	0/1:18,1:16:19.80:20,0,443	0/1:34,12:46:23.09:23,0,873	0/1:13,5:17:28.77:29,0,554	0/0:26,0:25:75.26:0,75,1938	0/0:19,0:19:54.17:0,54,1364	0/0:11,0:11:24.05:0,24,528
chr10	103243061	.	GTGAGCACTCCAA	G	872.48	PASS	AB=0.995;AC=16;AF=0.296;AN=54;BaseQRankSum=9.213;DP=623;FS=11.375;HRun=0;HaplotypeScore=224.2421;InbreedingCoeff=0.3359;MQ=47.29;MQ0=43;MQRankSum=-9.249;QD=3.76;ReadPosRankSum=-2.937;VQSLOD=1.1786;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,1:17:4.63:139,5,0	./.	1/1:25,0:2:4.07:11,4,0	0/0:25,0:1:2.94:0,3,18	0/0:14,0:14:35.98:0,36,659	0/1:19,0:12:14.12:101,0,14	1/1:29,0:20:8.43:48,8,0	0/0:21,0:18:45.08:0,45,689	0/1:29,1:28:99:166,0,135	0/0:23,0:22:40.15:0,40,1006	0/0:9,0:8:17.90:0,18,317	0/0:29,0:29:78.03:0,78,1940	0/1:21,0:18:63.61:93,0,64	0/1:17,0:16:33.31:112,0,33	0/0:29,0:29:75.15:0,75,2091	0/0:21,0:21:53.98:0,54,1356	0/0:23,0:22:63.09:0,63,1936	1/1:13,2:15:13.75:312,14,0	0/0:30,0:23:39.01:0,39,967	0/0:12,0:12:29.90:0,30,1076	0/0:63,0:58:99:0,139,4031	0/1:17,0:11:1.33:1,0,76	1/1:11,0:7:2.99:24,3,0	0/0:19,2:19:2.47:0,2,16	0/1:23,0:20:27.49:27,0,40	0/0:27,0:27:71.01:0,71,1360	0/0:22,0:22:62.49:0,62,2398	0/0:17,0:17:41.16:0,41,2094
chr10	103243178	.	TGAGC	T	983.34	PASS	AB=0.707;AC=9;AF=0.173;AN=52;BaseQRankSum=7.684;DP=607;FS=0.714;HRun=0;HaplotypeScore=132.6588;InbreedingCoeff=-0.1248;MQ=44.90;MQ0=42;MQRankSum=-7.839;QD=5.78;ReadPosRankSum=-2.458;VQSLOD=2.2792;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,6:9:54.43:54,0,136	0/1:10,4:10:87.54:88,0,452	./.	./.	0/0:17,0:13:24.08:0,24,637	0/1:10,5:10:52.89:53,0,299	0/1:19,6:15:35.32:35,0,674	0/0:21,0:13:39.13:0,39,1037	0/1:6,18:17:99:375,0,204	0/0:21,0:20:57.20:0,57,1519	0/0:14,0:14:36.06:0,36,884	0/0:41,0:40:99:0,117,3027	0/1:9,11:17:99:235,0,217	0/1:8,14:20:98.48:218,0,98	0/0:32,0:32:90.27:0,90,2320	0/0:24,0:24:72.25:0,72,1888	0/0:16,0:16:39.13:0,39,1033	0/1:7,3:4:46.84:47,0,150	0/0:30,0:18:48.16:0,48,1214	0/0:17,0:15:27.09:0,27,650	0/0:73,0:70:99:0,205,5279	0/0:7,5:7:0.16:0,0,1	0/0:8,2:5:3.01:0,3,80	0/1:13,10:20:2.56:11,0,3	0/0:16,11:16:6.73:0,7,178	0/0:26,0:24:69.24:0,69,1836	0/0:18,0:16:42.14:0,42,1101	0/0:4,0:4:3.01:0,3,80
chr10	103244720	.	A	AC	11262.84	PASS	AB=0.923;AC=25;AF=0.446;AN=56;BaseQRankSum=18.614;DP=680;FS=1.651;HRun=0;HaplotypeScore=89.3657;InbreedingCoeff=0.9291;MQ=77.74;MQ0=0;MQRankSum=0.553;QD=34.65;ReadPosRankSum=2.971;VQSLOD=4.6410;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,46:46:99:1776,132,0	1/1:0,9:9:27.02:345,27,0	0/0:12,0:12:33.11:0,33,459	0/0:18,0:18:51.07:0,51,623	0/0:24,0:24:72.13:0,72,868	1/1:1,24:25:62.20:867,62,0	1/1:2,23:25:63.17:835,63,0	0/0:33,0:33:99:0,99,1353	1/1:1,30:31:93.26:1236,93,0	0/0:25,0:25:75.21:0,75,978	0/0:23,0:23:69.16:0,69,878	0/0:19,0:19:57.18:0,57,773	1/1:3,25:28:70.96:943,71,0	1/1:0,28:28:78.25:1044,78,0	0/0:28,0:28:78.24:0,78,1058	0/1:22,2:24:16.49:16,0,711	0/0:24,0:24:66.19:0,66,882	1/1:1,25:26:63.21:857,63,0	0/0:22,0:22:60.19:0,60,816	0/0:23,0:23:62.71:0,63,836	0/0:22,0:22:66.22:0,66,922	1/1:0,15:15:45.15:615,45,0	1/1:0,18:18:54.18:740,54,0	1/1:0,25:25:72.24:972,72,0	1/1:0,25:25:75.25:1018,75,0	0/0:39,0:39:99:0,111,1466	0/0:26,0:25:78.20:0,78,1050	0/0:17,0:17:45.15:0,45,629
chr10	103245881	.	CG	C	7038.38	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=12.492;DP=568;FS=11.366;HRun=6;HaplotypeScore=61.7287;InbreedingCoeff=0.9996;MQ=85.80;MQ0=0;MQRankSum=-2.256;QD=28.04;ReadPosRankSum=4.127;VQSLOD=4.8070;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:41:99:1191,111,0	1/1:1,14:15:39.10:419,39,0	0/0:21,0:21:51.05:0,51,628	0/0:19,0:18:47.96:0,48,525	0/0:15,0:15:42.12:0,42,536	1/1:0,24:24:72.12:759,72,0	1/1:4,23:27:54.13:580,54,0	0/0:18,0:18:54.13:0,54,667	1/1:1,12:13:36.09:386,36,0	0/0:19,0:19:54.17:0,54,700	0/0:8,0:8:24.06:0,24,301	0/0:25,0:25:69.19:0,69,874	1/1:0,12:12:36.09:387,36,0	1/1:0,13:13:39.10:417,39,0	0/0:14,0:14:39.11:0,39,498	0/0:22,0:22:63.19:0,63,814	0/0:29,0:29:84.27:0,84,1105	1/1:0,20:20:54.14:580,54,0	0/0:17,0:17:39.13:0,39,508	0/0:17,0:17:45.13:0,45,574	0/0:33,0:33:87.18:0,87,1062	1/1:4,23:27:69.17:741,69,0	1/1:0,20:20:57.14:612,57,0	1/1:2,20:22:42.10:451,42,0	1/1:1,16:17:48.12:516,48,0	0/0:28,0:28:78.20:0,78,958	0/0:19,0:19:51.14:0,51,654	0/0:13,0:13:33.11:0,33,434
chr10	103245977	.	CGTCTCTCT	C	315.85	PASS	AB=0.619;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.595;DP=524;FS=4.842;HRun=0;HaplotypeScore=166.8033;InbreedingCoeff=0.6584;MQ=55.35;MQ0=7;MQRankSum=0.137;QD=5.01;ReadPosRankSum=-2.099;VQSLOD=1.8558;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:21.88:0,22,234	0/0:9,0:9:8.52:0,9,63	0/0:20,0:12:0.47:0,0,1	0/0:30,0:14:0:0,0,0	0/0:21,0:21:33.09:0,33,1082	0/0:20,0:20:13.75:0,14,112	0/0:24,0:24:16.58:0,17,155	0/0:27,0:26:0:0,0,0	0/0:18,0:18:11.43:0,11,131	0/0:26,0:26:24.02:0,24,498	0/0:13,0:13:24.05:0,24,513	0/0:18,0:18:33.09:0,33,1095	0/0:14,0:14:11.89:0,12,106	0/0:13,0:13:5.50:0,6,43	0/0:17,0:17:24.07:0,24,576	0/0:10,0:10:12.04:0,12,346	0/0:36,0:36:63.14:0,63,1835	0/0:14,0:14:13.32:0,13,100	1/1:9,5:13:12.01:180,12,0	1/1:11,0:10:8.99:139,9,0	1/1:25,0:25:11.98:122,12,0	0/0:13,0:13:6.02:0,6,73	0/0:12,0:12:7.72:0,8,46	0/0:23,0:23:10.73:0,11,80	0/0:20,0:20:10.84:0,11,88	0/0:19,0:19:24.08:0,24,742	0/1:5,8:13:0.11:0,0,0	0/0:10,0:10:2.98:0,3,22
chr10	103246002	.	GTC	G	5139.50	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=14.861;DP=543;FS=1.779;HRun=0;HaplotypeScore=125.4702;InbreedingCoeff=0.9286;MQ=51.88;MQ0=13;MQRankSum=0.201;QD=21.33;ReadPosRankSum=-2.017;VQSLOD=4.9763;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,16:44:87.26:1081,87,0	1/1:0,6:6:11.60:164,12,0	0/0:8,0:1:0:0,0,0	0/0:16,0:3:3.01:0,3,53	0/0:24,0:24:51.16:0,51,876	1/1:9,11:20:30.05:355,30,0	1/1:15,13:28:56.83:730,57,0	0/0:26,0:24:63.14:0,63,914	1/1:7,12:19:39.01:475,39,0	0/0:21,0:20:51.16:0,51,813	0/0:13,0:13:33.11:0,33,579	0/0:24,0:23:63.19:0,63,1061	1/1:9,5:14:29.82:341,30,0	1/1:5,7:12:15.05:194,15,0	0/0:19,0:18:48.16:0,48,828	0/0:10,0:10:30.08:0,30,476	0/0:36,0:35:93.28:0,93,1562	1/1:7,8:15:39.12:491,39,0	0/0:16,0:13:21.91:0,22,365	0/0:16,0:15:35.41:0,35,512	0/0:28,0:28:53.81:0,54,828	1/1:1,10:11:6.02:83,6,0	1/1:9,9:18:27.08:341,27,0	1/1:20,11:30:35.33:448,35,0	1/1:12,9:21:35.92:436,36,0	0/0:18,0:18:51.15:0,51,841	0/0:19,0:18:26.96:0,27,461	0/0:8,0:8:21.01:0,21,268
chr10	103246024	.	GTCTC	G	5444.60	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=10.998;DP=541;FS=9.838;HRun=0;HaplotypeScore=132.8132;InbreedingCoeff=0.9338;MQ=56.26;MQ0=6;MQRankSum=-0.269;QD=23.47;ReadPosRankSum=2.027;VQSLOD=4.1130;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,11:45:72.08:1222,72,0	1/1:3,4:7:12:168,12,0	0/0:15,0:4:3.01:0,3,75	0/0:17,0:5:6.02:0,6,110	0/0:24,0:24:59.69:0,60,1435	1/1:12,8:20:26.89:406,27,0	1/1:18,9:26:38.44:679,38,0	0/0:26,0:25:69.17:0,69,1451	1/1:12,7:19:33.10:531,33,0	0/0:17,0:16:42.14:0,42,1046	0/0:11,0:11:18.06:0,18,462	0/0:25,0:24:69.14:0,69,1600	1/1:7,3:10:17.71:244,18,0	1/1:10,3:13:15.03:263,15,0	0/0:17,0:17:45.15:0,45,1147	0/0:12,0:12:33.11:0,33,807	0/0:37,0:37:99:0,102,2379	1/1:10,5:15:36.07:580,36,0	0/0:21,0:20:41.75:0,42,797	0/0:14,0:14:32.25:0,32,706	0/0:26,0:29:59.52:0,60,1325	1/1:5,5:10:5.99:48,6,0	1/1:7,7:14:17.95:313,18,0	1/1:21,8:27:26.66:467,27,0	1/1:18,4:22:29.67:523,30,0	0/0:18,0:18:45.15:0,45,992	0/0:20,0:19:35.62:0,36,843	0/0:6,0:6:15.03:0,15,268
chr10	103246028	.	C	CTG	4644.32	PASS	AB=0.779;AC=19;AF=0.339;AN=56;BaseQRankSum=10.365;DP=564;FS=28.218;HRun=0;HaplotypeScore=119.1733;InbreedingCoeff=0.5199;MQ=57.53;MQ0=6;MQRankSum=1.027;QD=18.88;ReadPosRankSum=5.571;VQSLOD=3.2094;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,28:44:7.88:1128,8,0	0/1:8,0:8:37.83:100,0,38	0/0:15,0:4:3.01:0,3,43	0/0:18,0:6:5.96:0,6,65	0/0:24,0:24:60.19:0,60,891	1/1:10,9:19:1.20:294,1,0	0/1:14,15:29:6.33:468,0,6	0/0:29,0:28:78.05:0,78,984	0/1:10,9:19:41.73:365,0,42	0/0:16,0:15:45.13:0,45,665	0/0:11,0:11:20.87:0,21,299	0/0:26,0:25:75.13:0,75,1034	0/1:5,7:12:32.89:202,0,33	1/1:6,7:13:15.05:244,15,0	0/0:18,0:18:48.15:0,48,711	0/0:12,0:12:33.10:0,33,482	0/0:39,0:39:99:0,108,1527	1/1:6,10:16:12.39:504,12,0	0/0:21,0:20:50.85:0,51,606	0/0:12,0:12:13.72:0,14,407	0/0:31,0:31:66.07:0,66,892	0/1:13,1:14:13.06:61,0,13	1/1:8,7:15:18.06:315,18,0	1/1:13,19:30:26.57:450,27,0	1/1:7,15:23:29.76:513,30,0	0/0:20,0:20:57.16:0,57,795	0/0:20,0:19:35.98:0,36,517	0/0:6,0:6:15.03:0,15,206
chr10	103247214	.	A	AG	11624.95	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=6.346;DP=623;FS=2.987;HRun=0;HaplotypeScore=85.8102;InbreedingCoeff=0.9953;MQ=84.31;MQ0=0;MQRankSum=-1.643;QD=43.70;ReadPosRankSum=0.711;VQSLOD=5.2440;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:39:99:1600,102,0	1/1:0,8:8:21.07:333,21,0	0/0:22,0:22:57.99:0,58,741	0/0:19,0:18:45.09:0,45,576	0/0:19,0:19:57.19:0,57,797	1/1:0,15:16:39.13:617,39,0	1/1:2,41:43:99:1918,120,0	0/0:20,0:20:60.20:0,60,826	1/1:0,24:24:69.24:1103,69,0	0/0:26,0:26:78.26:0,78,1091	0/0:10,0:10:30.10:0,30,419	0/0:26,0:26:78.23:0,78,1053	1/1:2,25:27:72.25:1150,72,0	1/1:0,30:30:84.29:1343,84,0	0/0:24,0:24:63.21:0,63,881	0/0:14,0:14:42.14:0,42,587	0/0:31,0:31:93.28:0,93,1279	1/1:1,20:21:60.20:959,60,0	0/0:25,0:25:75.18:0,75,951	0/0:5,0:5:15.05:0,15,210	0/0:75,0:75:99:0,220,3036	1/1:0,10:10:27.01:401,27,0	1/1:0,8:8:21.07:334,21,0	1/1:0,21:21:60.20:959,60,0	1/1:0,19:19:57.19:909,57,0	0/0:16,0:16:39.13:0,39,546	0/0:19,0:19:57.17:0,57,774	0/0:6,0:6:18.06:0,18,250
chr10	103248054	.	G	GGT	334.70	PASS	AB=0.996;AC=19;AF=0.365;AN=52;BaseQRankSum=-3.241;DP=508;FS=9.624;HRun=0;HaplotypeScore=80.6443;InbreedingCoeff=0.1939;MQ=69.14;MQ0=6;MQRankSum=0.521;QD=1.56;ReadPosRankSum=0.615;VQSLOD=0.6854;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:2.76:0,3,14	./.	./.	0/0:27,0:18:0:0,0,0	0/0:18,0:18:2.99:0,3,24	1/1:6,8:15:0.09:39,0,0	0/1:33,0:32:99:118,0,99	1/1:24,0:24:1.92:7,2,0	0/0:15,0:15:3.44:0,3,33	0/0:9,0:9:2.11:0,2,31	0/1:7,0:7:0:0,0,0	0/0:18,0:18:11.78:0,12,92	0/1:12,0:12:14.61:34,0,15	1/1:9,5:15:6.02:88,6,0	0/0:10,0:10:8.96:0,9,69	1/1:5,4:10:3.01:44,3,0	0/1:36,1:37:29.67:30,0,80	0/0:14,0:17:8.64:0,9,47	0/0:18,0:18:8.96:0,9,77	0/0:9,0:10:2.84:0,3,14	0/0:36,0:50:8.52:0,9,42	1/1:11,0:11:3:25,3,0	1/1:7,1:8:3.01:44,3,0	0/0:22,7:30:8.55:0,9,58	0/1:11,0:11:19.83:36,0,20	0/1:21,0:21:0:0,0,0	0/1:10,0:10:0:0,0,0	0/0:7,0:7:2.99:0,3,24
chr10	103249551	.	ACGCG	A	7316.27	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=15.399;DP=674;FS=3.239;HRun=0;HaplotypeScore=125.7194;InbreedingCoeff=0.9738;MQ=63.01;MQ0=1;MQRankSum=-2.508;QD=24.07;ReadPosRankSum=8.358;VQSLOD=3.8372;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:5,41:46:67.11:1185,67,0	1/1:2,10:12:24.08:430,24,0	0/0:11,0:9:3.66:0,4,39	0/0:16,0:15:18.04:0,18,245	0/0:21,0:22:59.45:0,59,821	1/1:2,14:16:27.09:484,27,0	1/1:4,32:36:18.53:322,19,0	0/0:29,0:29:73.52:0,74,1179	1/1:1,18:19:30.10:523,30,0	0/0:20,0:20:45.07:0,45,909	0/0:18,0:17:42.01:0,42,813	0/0:26,0:26:63.12:0,63,1353	1/1:2,21:23:30.10:520,30,0	1/1:4,24:28:32.88:591,33,0	0/0:11,0:11:30.02:0,30,599	0/0:16,0:16:42.01:0,42,837	0/0:27,0:27:75.08:0,75,1565	1/1:2,28:30:39.13:699,39,0	0/0:27,0:27:64.71:0,65,952	0/0:12,0:12:29.97:0,30,559	0/0:77,0:77:99:0,198,4101	1/1:2,17:19:24.08:430,24,0	1/1:5,9:14:17.93:317,18,0	1/1:3,29:32:57.20:1021,57,0	1/1:5,24:29:45.15:795,45,0	0/0:23,0:23:62.89:0,63,1085	0/0:16,0:16:44.68:0,45,1155	0/0:19,0:19:48.03:0,48,846
chr10	103249991	.	CA	C	6969.53	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=14.654;DP=524;FS=15.385;HRun=3;HaplotypeScore=76.0667;InbreedingCoeff=0.9964;MQ=82.02;MQ0=0;MQRankSum=0.704;QD=32.12;ReadPosRankSum=1.657;VQSLOD=3.5955;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:39:99:1300,105,0	1/1:0,8:8:21.07:260,21,0	0/0:17,0:16:39.09:0,39,503	0/0:25,0:24:58.04:0,58,766	0/0:12,0:12:33.11:0,33,475	1/1:1,14:15:36.11:445,36,0	1/1:3,23:26:60.19:740,60,0	0/0:20,0:20:57.18:0,57,799	1/1:0,16:16:45.14:557,45,0	0/0:7,0:7:18.05:0,18,242	0/0:12,0:12:33.11:0,33,471	0/0:22,0:22:57.01:0,57,800	1/1:1,11:12:30.09:371,30,0	1/1:1,6:7:21.07:260,21,0	0/0:23,0:23:69.15:0,69,945	0/0:23,0:23:69.23:0,69,986	0/0:38,0:38:99:0,114,1572	1/1:2,20:22:60.19:743,60,0	0/0:16,0:16:48.16:0,48,691	0/0:18,0:18:54.10:0,54,729	0/0:29,0:29:84.24:0,84,1186	1/1:2,21:23:63.20:778,63,0	1/1:2,13:15:36.11:439,36,0	1/1:0,23:23:57.18:705,57,0	1/1:0,11:11:30.09:370,30,0	0/0:20,0:20:60.18:0,60,843	0/0:18,0:18:51.17:0,51,726	0/0:7,0:7:18.06:0,18,255
chr10	103250714	.	GGA	G	5418.50	PASS	AB=0.966;AC=42;AF=0.750;AN=56;BaseQRankSum=-5.026;DP=340;FS=14.267;HRun=0;HaplotypeScore=155.6196;InbreedingCoeff=-0.1521;MQ=53.46;MQ0=0;MQRankSum=-1.744;QD=16.13;ReadPosRankSum=-2.877;VQSLOD=3.2524;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:35.81:422,36,0	1/1:3,0:3:8.17:67,8,0	0/1:12,1:6:27.86:28,0,135	0/1:14,0:4:29.99:30,0,72	0/1:12,0:12:3:137,0,3	1/1:16,0:16:33.18:465,33,0	1/1:19,0:19:31.13:532,31,0	0/1:12,1:12:9.10:278,0,9	1/1:19,0:19:39.27:479,39,0	1/1:13,1:14:9.17:306,9,0	1/1:9,0:9:7.76:127,8,0	0/1:8,0:8:7.17:122,0,7	1/1:9,0:9:14.18:190,14,0	1/1:16,0:16:15.81:276,16,0	0/1:2,0:2:10.14:36,0,10	0/0:4,0:4:7.23:0,7,27	1/1:5,0:5:11.62:109,12,0	1/1:5,0:5:12.32:83,12,0	0/1:7,4:11:18.14:197,0,18	0/1:18,0:18:17.85:237,0,18	0/1:10,0:9:8.74:101,0,9	1/1:17,0:16:14.18:292,14,0	1/1:16,0:16:19.21:145,19,0	1/1:17,0:17:23.64:251,24,0	1/1:12,0:12:17.60:211,18,0	0/1:24,0:23:99:196,0,104	0/1:11,0:11:28.59:89,0,29	0/1:7,0:7:10.40:16,0,10
chr10	103250715	.	G	GGAAA	2661.20	PASS	AB=0.882;AC=19;AF=0.339;AN=56;BaseQRankSum=10.707;DP=365;FS=51.169;HRun=0;HaplotypeScore=207.0971;InbreedingCoeff=-0.5076;MQ=52.66;MQ0=0;MQRankSum=-6.508;QD=9.97;ReadPosRankSum=0.184;VQSLOD=1.1656;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,2:17:99:163,0,189	0/1:3,1:4:17.31:122,0,17	0/0:11,0:6:17.31:0,17,207	0/0:14,0:4:9.88:0,10,95	0/1:10,2:12:87.33:127,0,87	0/1:12,3:16:99:143,0,261	0/1:18,2:20:99:142,0,287	0/0:13,0:12:14.91:0,15,253	0/1:17,2:20:99:152,0,217	0/1:14,0:16:71.52:72,0,270	0/1:6,3:9:61.63:225,0,62	0/0:10,0:10:7.97:0,8,139	0/1:9,1:10:99:118,0,113	0/1:13,3:16:99:161,0,99	0/0:3,0:3:4.25:0,4,32	0/0:4,0:4:1.70:0,2,30	0/1:5,0:5:15.16:15,0,52	0/1:5,0:5:3:3,0,106	0/1:11,1:12:20.57:21,0,161	0/1:20,0:20:66.29:66,0,224	0/0:10,0:9:16.46:0,16,167	0/1:19,2:20:99:129,0,139	0/1:12,4:17:51.45:324,0,51	0/0:17,0:17:15.53:0,16,159	0/1:12,3:15:68.69:302,0,69	0/1:23,2:24:99:245,0,350	0/0:12,0:12:8.38:0,8,151	0/1:4,3:7:3.34:284,0,3
chr10	103250716	.	A	AG	7990.97	PASS	AB=0.867;AC=53;AF=0.946;AN=56;BaseQRankSum=-5.816;DP=376;FS=2.354;HRun=2;HaplotypeScore=172.5749;InbreedingCoeff=-0.0613;MQ=52.55;MQ0=1;MQRankSum=-0.037;QD=21.25;ReadPosRankSum=1.831;VQSLOD=4.7553;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,14:20:34.64:419,35,0	1/1:2,2:4:6.04:62,6,0	0/1:15,0:8:24.48:24,0,124	0/1:17,0:4:30.59:31,0,70	1/1:2,10:12:23.10:238,23,0	1/1:5,11:16:42.25:498,42,0	1/1:7,14:21:33.44:575,33,0	1/1:4,9:12:29.99:429,30,0	1/1:5,15:20:43.45:484,43,0	1/1:9,7:16:34.27:431,34,0	1/1:4,5:9:17.62:176,18,0	1/1:1,9:10:23.96:308,24,0	1/1:4,7:12:22.37:243,22,0	1/1:8,7:16:25.58:297,26,0	0/1:1,2:3:5.79:36,0,6	1/1:0,4:4:9.03:113,9,0	1/1:0,4:5:11.87:144,12,0	1/1:0,5:5:15.05:216,15,0	1/1:9,4:13:29.47:343,29,0	1/1:8,12:20:37.20:453,37,0	1/1:2,8:9:24.05:301,24,0	1/1:10,10:20:38.64:413,39,0	1/1:7,8:17:16.30:154,16,0	1/1:4,14:18:25.20:292,25,0	1/1:8,6:15:18.65:220,19,0	1/1:9,16:24:47.97:603,48,0	1/1:3,9:12:29.81:405,30,0	1/1:5,2:7:9.69:84,10,0
chr10	103250719	.	A	AG	613.64	PASS	AB=0.972;AC=19;AF=0.339;AN=56;BaseQRankSum=1.608;DP=390;FS=2.308;HRun=0;HaplotypeScore=196.3437;InbreedingCoeff=-0.3331;MQ=53.98;MQ0=1;MQRankSum=-7.534;QD=2.43;ReadPosRankSum=4.625;VQSLOD=2.7210;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:3.48:0,3,122	0/0:5,0:5:3.49:0,3,12	0/0:17,0:8:17.92:0,18,248	0/1:21,0:6:7.69:8,0,61	0/1:12,0:12:11.56:12,0,53	0/1:17,0:17:11.13:11,0,25	0/0:20,0:20:7.85:0,8,78	0/0:13,0:12:7.99:0,8,102	0/1:18,1:19:9.13:69,0,9	0/1:17,1:18:57.35:57,0,99	0/0:9,0:9:4.40:0,4,22	0/1:10,0:10:17.59:18,0,32	0/1:10,1:11:48.25:62,0,48	0/1:14,1:16:21.71:60,0,22	0/0:4,0:4:3.49:0,3,34	0/0:4,0:4:7.18:0,7,49	0/1:6,0:6:22.16:66,0,22	1/1:5,0:5:3.72:11,4,0	0/1:14,0:14:20.30:20,0,109	0/1:20,1:21:34.13:81,0,34	0/1:11,0:10:36.21:36,0,48	0/1:21,0:20:71.88:72,0,72	0/0:17,1:18:11.64:0,12,133	0/0:19,0:19:10.68:0,11,105	0/1:14,0:14:9.11:9,0,17	0/1:24,2:25:98.61:99,0,139	1/1:10,1:11:3.45:75,3,0	0/0:6,0:6:0.05:0,0,14
chr10	103250725	.	GGAC	G	1321.98	PASS	AB=0.860;AC=18;AF=0.321;AN=56;BaseQRankSum=13.063;DP=426;FS=71.314;HRun=0;HaplotypeScore=220.0872;InbreedingCoeff=-0.4579;MQ=57.09;MQ0=2;MQRankSum=-8.700;QD=4.59;ReadPosRankSum=2.524;VQSLOD=0.2946;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,3:25:93.91:94,0,842	0/1:3,2:5:61.46:61,0,121	0/0:23,0:11:32.15:0,32,526	0/0:29,0:10:26.93:0,27,385	0/1:10,2:12:55.61:56,0,480	0/1:16,2:18:78.70:79,0,641	0/1:19,3:22:15.11:15,0,1001	0/1:15,0:14:0.78:1,0,711	0/1:19,2:21:90.36:90,0,589	0/1:17,1:19:95.66:96,0,662	0/1:8,4:12:99:155,0,226	0/0:9,1:10:10.45:0,10,483	0/1:10,2:12:56.43:56,0,394	0/1:13,2:15:99:105,0,425	0/1:5,0:5:6.37:6,0,169	0/0:5,0:5:15:0,15,312	0/0:6,0:6:12.30:0,12,247	0/0:6,0:6:18.06:0,18,392	0/0:13,1:14:12.35:0,12,712	0/1:19,3:22:97.68:98,0,745	0/0:11,0:10:21.96:0,22,512	0/1:17,5:21:99:100,0,594	0/1:12,5:17:99:153,0,518	0/0:23,0:23:44.70:0,45,883	0/1:8,6:14:99:187,0,292	0/1:22,3:24:98.18:98,0,977	0/0:10,1:11:18.64:0,19,556	0/1:6,1:7:27.33:27,0,162
chr10	103251970	.	CACACACACACAT	C	6098.74	PASS	AB=0.953;AC=22;AF=0.393;AN=56;BaseQRankSum=13.844;DP=940;FS=107.320;HRun=0;HaplotypeScore=331.5321;InbreedingCoeff=0.8310;MQ=49.69;MQ0=39;MQRankSum=-0.789;QD=21.55;ReadPosRankSum=-1.375;VQSLOD=-0.3417;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:45,2:47:24.55:427,0,25	1/1:11,5:16:27.01:421,27,0	0/0:23,0:14:9.92:0,10,113	0/0:24,0:9:14.65:0,15,124	0/0:32,0:32:90.31:0,90,3820	1/1:9,2:10:24.08:658,24,0	1/1:29,0:29:36.11:572,36,0	0/0:55,0:34:78.09:0,78,1183	1/1:17,4:21:32.65:590,33,0	0/0:69,0:66:99:0,172,5639	0/0:20,0:19:48.14:0,48,1626	0/0:40,0:40:87.29:0,87,3202	1/1:18,1:16:30.09:649,30,0	1/1:20,5:23:42.14:1038,42,0	0/0:49,0:47:99:0,102,3336	0/0:43,0:43:99:0,111,4471	0/0:45,0:45:99:0,117,3662	1/1:15,1:15:18.84:339,19,0	0/0:32,0:18:35.64:0,36,1246	0/0:34,0:33:60.18:0,60,1811	0/0:101,0:96:99:0,220,7301	1/1:21,5:25:18.01:234,18,0	1/1:15,3:18:14.71:250,15,0	0/1:33,2:35:34.04:589,0,34	1/1:2,18:20:11.46:333,11,0	0/0:35,0:35:84.26:0,84,2773	0/0:41,0:39:99:0,102,3169	0/0:14,0:13:36.12:0,36,1430
chr10	103252082	.	TATAC	T	3465.63	PASS	AB=0.857;AC=23;AF=0.411;AN=56;BaseQRankSum=13.786;DP=1136;FS=14.071;HRun=0;HaplotypeScore=254.7700;InbreedingCoeff=0.8892;MQ=44.33;MQ0=79;MQRankSum=-10.147;QD=9.76;ReadPosRankSum=0.699;VQSLOD=1.2346;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,2:16:10.73:76,11,0	1/1:8,5:13:16.24:211,16,0	0/0:15,0:2:2.98:0,3,21	0/0:13,0:1:2.96:0,3,19	0/0:28,0:27:75.26:0,75,2038	1/1:11,13:19:15.03:287,15,0	1/1:24,9:27:33.22:468,33,0	0/0:113,0:62:99:0,168,3724	1/1:20,21:35:13.02:193,13,0	0/0:76,0:66:99:0,154,4658	0/0:22,0:21:63.18:0,63,1509	0/0:50,0:50:99:0,132,3474	1/1:21,23:40:51.09:857,51,0	1/1:26,16:32:32.43:520,32,0	0/0:63,0:58:99:0,156,3844	0/0:60,0:60:99:0,166,4331	0/0:52,0:48:99:0,137,3098	0/1:10,2:7:1.21:2,0,1	0/0:43,0:27:66.14:0,66,1435	0/0:23,0:22:51.16:0,51,1310	0/0:109,0:102:99:0,244,5988	1/1:24,18:35:21.07:413,21,0	1/1:26,7:30:12.45:150,12,0	1/1:17,6:21:8.49:91,8,0	1/1:19,12:28:11.96:198,12,0	0/0:53,0:47:99:0,129,3359	0/0:40,0:37:99:0,111,2677	0/0:20,0:20:56.77:0,57,1306
chr10	103252083	.	ATAC	A	861.37	PASS	AB=0.791;AC=16;AF=0.286;AN=56;BaseQRankSum=12.583;DP=1141;FS=17.628;HRun=0;HaplotypeScore=251.7349;InbreedingCoeff=0.4672;MQ=44.33;MQ0=78;MQRankSum=-9.175;QD=2.50;ReadPosRankSum=0.372;VQSLOD=0.8609;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,8:17:6.18:19,0,6	1/1:9,4:13:4.35:59,4,0	0/0:16,0:3:3.01:0,3,47	0/0:13,0:1:3.01:0,3,47	0/0:28,0:27:75.73:0,76,1821	1/1:18,6:18:14.55:92,15,0	0/1:29,4:27:19.15:103,0,19	0/0:112,0:62:99:0,171,3700	0/1:36,5:35:19.44:47,0,19	0/0:76,0:66:99:0,192,4402	0/0:24,0:23:69.24:0,69,1529	0/0:50,0:50:99:0,135,3193	1/1:32,12:40:33.54:332,34,0	1/1:32,10:32:4.87:136,5,0	0/0:63,0:58:99:0,160,3692	0/0:61,0:61:99:0,169,3990	0/0:52,0:48:99:0,140,3092	0/0:12,1:8:5.90:0,6,41	0/0:42,0:26:66.23:0,66,1497	0/0:23,0:22:51.18:0,51,1224	0/0:107,0:100:99:0,246,5680	1/1:32,10:35:20.73:138,21,0	0/1:15,18:30:2.78:47,0,3	0/1:21,3:22:11.71:12,0,31	0/1:19,11:27:1.11:51,0,1	0/0:56,0:49:99:0,135,3154	0/0:41,0:38:99:0,114,2603	0/0:20,0:20:57.20:0,57,1264
chr10	103252084	.	TAC	T	1482.91	PASS	AC=24;AF=0.444;AN=54;BaseQRankSum=13.263;DP=1152;FS=14.307;HRun=0;HaplotypeScore=237.0142;InbreedingCoeff=0.8638;MQ=44.28;MQ0=83;MQRankSum=-10.466;QD=4.15;ReadPosRankSum=1.067;VQSLOD=1.4629;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,4:17:10.40:59,10,0	1/1:11,2:13:13.22:131,13,0	./.	0/0:14,0:2:2.68:0,3,11	0/0:28,1:28:78.25:0,78,1279	1/1:21,3:18:14.99:140,15,0	1/1:30,4:28:24.79:250,25,0	0/0:114,0:63:99:0,138,2105	1/1:34,6:34:11.96:98,12,0	0/0:77,0:68:99:0,175,2921	0/0:24,0:23:60.16:0,60,916	0/0:50,0:50:99:0,123,2041	1/1:41,3:40:47.04:356,47,0	1/1:36,5:31:32.58:278,33,0	0/0:63,0:58:99:0,141,2293	0/0:61,0:61:99:0,163,2655	0/0:51,0:47:99:0,125,1837	1/1:12,1:8:0.09:25,0,0	0/0:44,0:27:57.12:0,57,825	0/0:23,0:22:48.16:0,48,795	0/0:108,0:100:99:0,216,3475	1/1:31,11:35:21:199,21,0	1/1:31,3:31:4.61:39,5,0	1/1:20,4:22:1.42:25,1,0	1/1:27,3:27:11.62:88,12,0	0/0:59,0:50:99:0,129,2058	0/0:41,0:38:99:0,105,1594	0/0:20,0:20:42.13:0,42,687
chr10	103252114	.	CAT	C	62.33	PASS	AB=0.844;AC=5;AF=0.089;AN=56;BaseQRankSum=5.531;DP=1163;FS=19.273;HRun=0;HaplotypeScore=260.1492;InbreedingCoeff=-0.0983;MQ=45.19;MQ0=73;MQRankSum=-4.673;QD=0.51;ReadPosRankSum=-2.297;VQSLOD=0.9027;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,6:18:19.37:19,0,130	0/1:12,3:14:29.54:30,0,139	0/0:34,0:9:14.14:0,14,327	0/0:30,0:8:24.08:0,24,454	0/0:37,0:37:99:0,99,1774	0/0:20,3:18:23.72:0,24,332	0/0:42,0:34:53.75:0,54,836	0/0:95,0:62:99:0,159,2539	0/0:30,0:24:15.04:0,15,204	0/0:74,0:68:99:0,192,3458	0/0:32,0:32:90.23:0,90,1553	0/0:57,0:57:99:0,143,2477	0/1:34,5:35:97.58:98,0,511	0/0:34,7:35:38.12:0,38,460	0/0:66,0:62:99:0,175,3137	0/0:59,0:59:99:0,157,2832	0/0:44,0:40:99:0,110,1863	0/1:14,2:11:21.36:21,0,157	0/0:42,0:20:30.92:0,31,845	0/0:27,0:26:75.22:0,75,1327	0/0:103,0:94:99:0,228,3978	0/0:43,4:41:24.08:0,24,345	0/0:17,5:19:11.60:0,12,231	0/0:23,2:19:22.42:0,22,184	0/1:28,6:30:8.74:9,0,189	0/0:52,0:44:99:0,120,2164	0/0:43,0:40:99:0,117,2165	0/0:13,0:13:36.12:0,36,693
chr10	103252158	.	A	AAC	2946.91	PASS	AB=0.898;AC=21;AF=0.375;AN=56;BaseQRankSum=13.998;DP=1005;FS=17.866;HRun=0;HaplotypeScore=249.3496;InbreedingCoeff=0.7571;MQ=53.16;MQ0=15;MQRankSum=-12.792;QD=10.68;ReadPosRankSum=-5.043;VQSLOD=1.2353;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,3:16:0.37:152,0,0	1/1:9,6:15:21.07:328,21,0	0/0:41,0:12:25.52:0,26,238	0/0:49,0:17:37.20:0,37,372	0/0:30,0:30:71.93:0,72,870	1/1:8,1:8:6.02:88,6,0	1/1:27,6:28:29.97:320,30,0	0/0:58,0:56:99:0,117,1394	1/1:16,6:22:26.94:314,27,0	0/0:60,0:60:99:0,135,1651	0/0:35,0:35:86.59:0,87,1022	0/0:55,0:55:99:0,123,1445	1/1:23,2:25:10.45:166,10,0	1/1:19,6:24:2.68:237,3,0	0/0:58,0:58:99:0,155,1894	0/0:57,0:57:99:0,156,1886	0/0:38,0:38:37.98:0,38,1107	0/1:15,1:15:31.68:276,0,32	0/0:28,0:20:48.14:0,48,579	0/0:30,0:30:81.24:0,81,989	0/0:87,0:86:99:0,189,2242	1/1:28,7:35:21.42:334,21,0	1/1:14,8:22:27.30:403,27,0	0/1:25,3:23:49.94:121,0,50	1/1:20,9:26:29.26:413,29,0	0/0:44,0:45:99:0,129,1541	0/0:40,0:40:93.21:0,93,1114	0/0:18,0:18:42.12:0,42,508
chr10	103252198	.	T	TAC	2586.04	PASS	AB=0.976;AC=25;AF=0.446;AN=56;BaseQRankSum=12.593;DP=929;FS=11.053;HRun=0;HaplotypeScore=193.2309;InbreedingCoeff=0.8549;MQ=50.45;MQ0=37;MQRankSum=-10.370;QD=12.08;ReadPosRankSum=1.255;VQSLOD=2.7805;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,4:6:9.03:155,9,0	1/1:3,6:9:18.06:290,18,0	0/0:38,0:15:15.12:0,15,224	0/1:37,0:12:13.97:14,0,255	0/0:26,0:26:63.17:0,63,801	1/1:3,2:4:6.02:104,6,0	1/1:3,10:11:18.06:309,18,0	0/0:81,0:71:99:0,193,2427	1/1:6,8:13:15.05:259,15,0	0/0:46,0:46:99:0,126,1639	0/0:28,0:28:78.26:0,78,1032	0/0:57,0:56:99:0,123,1721	1/1:11,2:13:6.02:104,6,0	1/1:8,7:14:15.05:259,15,0	0/0:60,0:60:99:0,159,2096	0/0:68,0:68:99:0,184,2371	0/0:48,0:47:99:0,128,1709	1/1:8,5:11:8.57:250,9,0	0/0:40,0:25:63.18:0,63,808	0/0:34,0:34:87.26:0,87,1138	0/0:94,0:89:99:0,214,2801	1/1:18,6:24:18.05:310,18,0	1/1:12,7:19:18.03:276,18,0	1/1:15,3:15:5.04:58,5,0	1/1:13,9:19:24.08:414,24,0	0/0:43,0:41:99:0,114,1499	0/0:31,0:31:66.18:0,66,838	0/0:19,0:19:57.15:0,57,722
chr10	103252228	.	C	CAT	5575.67	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=12.771;DP=983;FS=11.195;HRun=0;HaplotypeScore=179.7138;InbreedingCoeff=0.9912;MQ=53.69;MQ0=20;MQRankSum=-10.151;QD=25.58;ReadPosRankSum=-8.540;VQSLOD=2.2744;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:6,8:11:21.07:344,21,0	1/1:9,2:11:26.92:329,27,0	0/0:50,0:16:32.13:0,32,395	0/0:41,0:16:14.29:0,14,252	0/0:29,0:28:81.19:0,81,1062	1/1:3,6:8:18.04:288,18,0	1/1:14,6:16:33:476,33,0	0/0:62,0:59:99:0,150,1947	1/1:9,8:14:33.11:565,33,0	0/0:58,0:58:99:0,147,1988	0/0:29,0:29:87.20:0,87,1136	0/0:55,0:55:99:0,147,1959	1/1:7,9:16:41.68:596,42,0	1/1:12,8:16:26.85:389,27,0	0/0:60,0:60:99:0,180,2402	0/0:65,0:65:99:0,174,2375	0/0:53,1:53:99:0,106,2041	1/1:10,6:14:13.78:321,14,0	0/0:35,0:29:77:0,77,976	0/0:35,0:33:90.25:0,90,1226	0/0:107,0:104:99:0,277,3576	1/1:12,12:21:33.11:553,33,0	1/1:12,12:23:51.04:714,51,0	1/1:11,21:30:40.24:691,40,0	1/1:11,4:14:18.06:309,18,0	0/0:39,0:39:99:0,117,1626	0/0:26,0:26:69.15:0,69,876	0/0:19,0:19:50.71:0,51,654
chr10	103252390	.	AACACACACATAT	A	8497.14	PASS	AB=0.952;AC=25;AF=0.446;AN=56;BaseQRankSum=11.273;DP=902;FS=11.536;HRun=0;HaplotypeScore=329.6010;InbreedingCoeff=0.3071;MQ=46.92;MQ0=30;MQRankSum=-11.553;QD=19.67;ReadPosRankSum=-9.798;VQSLOD=0.9644;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:24:67.01:342,0,67	1/1:6,1:7:11.92:92,12,0	0/0:58,0:13:27.09:0,27,597	0/0:56,0:24:47.93:0,48,1363	0/0:30,0:30:84.27:0,84,4041	0/1:20,1:20:99:234,0,152	1/1:23,4:26:2.37:258,2,0	1/1:36,0:29:51.14:891,51,0	0/1:38,3:35:99:799,0,315	0/0:58,0:58:99:0,153,6762	0/0:25,0:25:66.23:0,66,3125	0/0:37,0:37:87.27:0,87,3534	0/1:31,1:31:99:684,0,191	0/1:22,4:26:99:397,0,140	0/0:47,0:47:99:0,123,5711	0/0:43,0:43:99:0,108,4848	0/0:39,0:39:90.24:0,90,3703	0/1:13,0:11:99:181,0,107	1/1:8,9:15:24.05:522,24,0	1/1:2,28:30:51.09:1406,51,0	1/1:39,7:45:59.71:848,60,0	0/1:19,2:21:99:159,0,169	0/1:21,0:21:99:204,0,175	1/1:22,1:19:8.96:150,9,0	0/1:25,2:27:99:175,0,184	0/0:53,0:54:99:0,138,5889	1/1:9,8:17:42.13:1154,42,0	0/0:23,0:23:63.19:0,63,3028
chr10	103252398	.	CAT	C	1913.63	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=8.771;DP=876;FS=4.855;HRun=0;HaplotypeScore=211.7531;InbreedingCoeff=0.6254;MQ=45.17;MQ0=38;MQRankSum=-3.344;QD=7.30;ReadPosRankSum=-6.292;VQSLOD=1.3408;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:22:27.72:0,28,176	0/0:5,0:5:2.99:0,3,25	0/0:60,0:13:16.45:0,16,406	0/0:58,1:21:53.84:0,54,803	0/0:32,0:32:87.28:0,87,1545	0/0:19,0:18:23.49:0,23,176	0/0:24,1:25:8.53:0,9,84	1/1:27,13:28:59.79:622,60,0	0/0:38,0:32:27.42:0,27,245	0/0:55,0:55:99:0,159,2714	0/0:26,0:25:72.14:0,72,1235	0/0:36,0:36:96.26:0,96,1598	0/1:30,0:29:8.34:8,0,237	0/1:26,0:26:5.83:6,0,135	0/0:45,0:45:99:0,135,2279	0/0:42,0:42:99:0,114,1921	0/0:37,0:37:99:0,102,1568	0/1:13,0:11:3.55:4,0,77	1/1:17,0:12:22.38:219,22,0	1/1:29,0:29:40.91:462,41,0	1/1:31,8:38:36.49:405,36,0	0/0:15,0:15:18.47:0,18,158	0/0:21,0:21:14.09:0,14,132	1/1:22,1:20:3.41:34,3,0	0/1:29,0:29:22.44:22,0,132	0/0:50,0:50:99:0,144,2462	1/1:12,4:16:29.21:316,29,0	0/0:23,0:23:68.39:0,68,1147
chr10	103252478	.	AAC	A	7937.49	PASS	AB=0.814;AC=24;AF=0.429;AN=56;BaseQRankSum=2.088;DP=960;FS=7.510;HRun=0;HaplotypeScore=194.2003;InbreedingCoeff=0.8746;MQ=53.49;MQ0=20;MQRankSum=0.094;QD=17.60;ReadPosRankSum=3.454;VQSLOD=4.1252;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,22:44:61.61:978,62,0	1/1:6,7:12:24.07:288,24,0	0/0:28,0:14:23.73:0,24,221	0/0:41,0:12:17.83:0,18,239	0/0:27,0:27:60.20:0,60,893	0/1:11,9:19:7.57:337,0,8	1/1:32,18:50:19.74:759,20,0	0/0:18,0:34:44.46:0,44,354	1/1:20,25:42:72.64:1048,73,0	0/0:27,0:27:69.23:0,69,1024	0/0:20,0:22:45.15:0,45,691	0/0:39,1:41:51.32:0,51,1197	1/1:17,18:35:75.22:890,75,0	1/1:20,14:31:56.32:636,56,0	0/0:43,3:46:23.91:0,24,1248	0/1:36,2:38:2.21:2,0,1339	0/0:48,2:50:6.69:0,7,1456	1/1:9,15:21:19.27:543,19,0	0/0:26,0:20:35.01:0,35,293	0/0:11,0:17:34.79:0,35,284	0/0:52,0:68:82.76:0,83,670	1/1:16,15:31:42.83:607,43,0	1/1:12,8:20:33.10:395,33,0	1/1:27,36:63:99:1175,105,0	1/1:14,15:29:18.94:280,19,0	0/0:30,1:31:39.08:0,39,986	0/0:3,0:23:26.86:0,27,236	0/0:24,0:24:60.20:0,60,929
chr10	103254447	.	A	AG	8034.49	PASS	AB=0.929;AC=25;AF=0.446;AN=56;BaseQRankSum=13.244;DP=628;FS=6.789;HRun=1;HaplotypeScore=80.9395;InbreedingCoeff=0.9321;MQ=71.13;MQ0=1;MQRankSum=-1.120;QD=31.51;ReadPosRankSum=5.347;VQSLOD=4.1441;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:90.30:1340,90,0	1/1:0,12:12:33.11:493,33,0	0/0:29,0:20:27.85:0,28,398	0/0:23,0:15:28.86:0,29,318	0/0:24,0:24:72.04:0,72,879	1/1:1,16:17:42.14:615,42,0	1/1:1,17:18:36.12:538,36,0	0/0:28,0:28:74.37:0,74,850	1/1:1,13:14:36.12:537,36,0	0/0:27,0:27:78.24:0,78,979	0/0:32,0:32:93.21:0,93,1131	0/0:17,0:17:51.14:0,51,645	1/1:1,14:15:33.10:473,33,0	1/1:0,17:17:39.13:582,39,0	0/0:21,0:21:57.18:0,57,737	0/1:24,2:26:11.39:11,0,811	0/0:29,1:30:45.01:0,45,968	1/1:2,14:16:33.10:474,33,0	0/0:25,0:25:72.20:0,72,871	0/0:24,0:24:72.18:0,72,865	0/0:14,0:14:42.11:0,42,515	1/1:0,13:13:29.93:392,30,0	1/1:2,29:31:65.97:882,66,0	1/1:2,16:18:45.15:670,45,0	1/1:0,24:24:69.23:1026,69,0	0/0:36,0:36:99:0,102,1274	0/0:30,0:30:90.25:0,90,1100	0/0:12,0:12:36.12:0,36,465
chr10	103254448	.	G	GGA	3509.31	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=16.631;DP=626;FS=7.462;HRun=0;HaplotypeScore=108.7698;InbreedingCoeff=0.9950;MQ=71.13;MQ0=1;MQRankSum=-0.959;QD=15.53;ReadPosRankSum=5.633;VQSLOD=2.8912;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:88.68:564,89,0	1/1:12,0:12:32.52:206,33,0	0/0:30,0:20:42.70:0,43,526	0/0:23,0:15:28.58:0,29,387	0/0:25,0:25:72.04:0,72,1080	1/1:17,0:17:40.65:251,41,0	1/1:18,0:18:16.58:203,17,0	0/0:27,0:28:79.72:0,80,1075	1/1:14,0:14:17.29:207,17,0	0/0:27,0:27:81.25:0,81,1244	0/0:30,0:31:93.29:0,93,1422	0/0:17,0:17:51.15:0,51,800	1/1:14,1:15:32.58:249,33,0	1/1:17,0:17:38.43:244,38,0	0/0:22,0:22:60.17:0,60,939	0/0:26,0:26:40.60:0,41,1054	0/0:28,0:30:71.02:0,71,1203	1/1:14,1:15:16.52:228,17,0	0/0:25,0:25:72.21:0,72,1049	0/0:24,0:24:72.20:0,72,1067	0/0:14,0:14:42.13:0,42,646	1/1:12,0:12:29.50:184,29,0	1/1:29,1:30:64.98:447,65,0	1/1:17,1:18:25.54:298,26,0	1/1:24,0:24:67.86:427,68,0	0/0:36,0:36:99:0,105,1605	0/0:30,0:30:90.28:0,90,1362	0/0:12,0:12:36.12:0,36,580
chr10	103254923	.	G	GAATA	2038.03	PASS	AC=30;AF=0.625;AN=48;BaseQRankSum=3.589;DP=267;FS=0.776;HRun=0;HaplotypeScore=56.0429;InbreedingCoeff=0.6792;MQ=57.04;MQ0=1;MQRankSum=-1.371;QD=13.23;ReadPosRankSum=-0.277;VQSLOD=2.4270;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,11:21:17.89:367,18,0	1/1:7,2:9:3.01:71,3,0	./.	./.	0/0:9,0:10:15.04:0,15,216	1/1:9,13:22:30.10:711,30,0	1/1:2,1:3:3.01:71,3,0	1/1:27,0:26:0.47:1,0,0	1/1:0,2:2:3.01:56,3,0	0/0:10,0:10:21.07:0,21,328	0/0:10,0:10:15.05:0,15,230	0/0:3,0:3:6.01:0,6,72	1/1:3,4:7:3.01:71,3,0	1/1:4,2:6:6.02:142,6,0	0/0:6,0:6:6.02:0,6,94	0/0:7,0:7:12.04:0,12,185	0/0:19,0:20:42.14:0,42,631	1/1:10,7:18:12.04:284,12,0	./.	1/1:4,1:8:9:117,9,0	1/1:7,0:7:5.99:50,6,0	1/1:2,0:2:3:25,3,0	1/1:1,2:3:3.48:72,3,0	./.	1/1:7,0:7:9:98,9,0	0/0:13,0:13:12.04:0,12,186	1/1:10,0:12:6:73,6,0	0/0:19,0:19:42.14:0,42,639
chr10	103256783	.	TGG	T	5516.80	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=3.236;DP=713;FS=7.968;HRun=8;HaplotypeScore=115.6455;InbreedingCoeff=0.9995;MQ=92.16;MQ0=0;MQRankSum=-0.206;QD=31.17;ReadPosRankSum=5.251;VQSLOD=4.0165;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,120,1954	0/0:8,0:8:24.08:0,24,404	0/0:29,0:30:77.70:0,78,1184	0/0:33,0:33:82.12:0,82,1274	0/0:30,0:30:81.27:0,81,1335	0/0:24,0:24:59.69:0,60,961	0/0:25,0:25:72.24:0,72,1191	0/0:4,0:27:61.43:0,61,245	1/1:0,25:25:75.24:915,75,0	0/0:22,0:22:60.21:0,60,1013	0/0:19,0:19:48.16:0,48,799	1/1:6,21:27:63.20:768,63,0	1/1:0,23:23:60.19:732,60,0	1/1:4,23:27:69.21:841,69,0	0/0:23,0:23:62.70:0,63,1015	0/0:21,0:21:54.17:0,54,886	0/0:28,0:28:75.21:0,75,1233	0/0:31,0:31:87.27:0,87,1419	0/0:4,0:19:40.41:0,40,153	0/0:1,0:22:44.64:0,45,156	0/0:5,0:52:99:0,111,417	1/1:1,15:16:39.12:475,39,0	1/1:3,15:18:45.14:541,45,0	1/1:3,38:41:99:1244,102,0	0/0:17,0:18:50.65:0,51,796	0/0:16,0:16:42.14:0,42,710	0/0:4,0:31:49.04:0,49,190	0/0:12,0:12:33.11:0,33,558
chr10	103256790	.	GGT	G	1945.25	PASS	AB=0.947;AC=13;AF=0.232;AN=56;BaseQRankSum=7.989;DP=708;FS=7.143;HRun=0;HaplotypeScore=124.5336;InbreedingCoeff=0.8830;MQ=93.20;MQ0=0;MQRankSum=-6.585;QD=11.05;ReadPosRankSum=6.264;VQSLOD=2.5209;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,2264	0/0:8,0:8:24.08:0,24,432	0/0:32,0:32:89.94:0,90,1472	0/0:33,0:33:91.09:0,91,1488	0/0:28,0:28:81.26:0,81,1476	0/0:22,0:22:65.88:0,66,1158	0/0:30,0:30:90.20:0,90,1467	0/0:27,0:27:75.94:0,76,464	1/1:25,0:25:70.83:365,71,0	0/0:20,0:20:60.20:0,60,1097	0/0:19,0:19:51.15:0,51,899	1/1:24,2:26:1.26:288,1,0	1/1:24,0:24:35.21:287,35,0	1/1:25,1:26:33:342,33,0	0/0:23,0:23:68.67:0,69,1175	0/0:19,0:19:51.16:0,51,940	0/0:29,0:29:81.17:0,81,1449	0/0:28,0:28:84.27:0,84,1572	0/0:23,0:23:67.44:0,67,466	0/0:22,0:22:53.45:0,53,288	0/0:48,0:48:99:0,121,647	0/1:17,1:18:4.20:159,0,4	1/1:15,2:17:30.59:248,31,0	1/1:40,0:40:59.56:440,60,0	0/0:19,0:19:54.02:0,54,911	0/0:15,0:15:42.14:0,42,792	0/0:29,0:29:73.88:0,74,408	0/0:13,0:13:39.05:0,39,678
chr10	103257090	.	C	CCACA	5052.52	PASS	AB=0.774;AC=27;AF=0.482;AN=56;BaseQRankSum=0.694;DP=666;FS=7.537;HRun=0;HaplotypeScore=137.0855;InbreedingCoeff=0.3803;MQ=62.60;MQ0=16;MQRankSum=1.984;QD=11.92;ReadPosRankSum=-0.828;VQSLOD=3.9913;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:43:18.20:369,0,18	1/1:8,4:13:9.01:182,9,0	0/0:39,0:13:3.01:0,3,48	0/0:50,0:23:3.01:0,3,34	0/0:17,0:21:14.07:0,14,306	1/1:4,6:13:14.52:240,15,0	1/1:19,13:39:26.78:468,27,0	0/1:25,0:23:28.50:64,0,28	1/1:10,13:25:38.60:811,39,0	0/0:10,0:17:1.27:0,1,40	0/0:4,0:10:6.01:0,6,56	1/1:11,12:27:23.22:305,23,0	1/1:8,11:22:21.50:451,21,0	1/1:5,11:19:20.79:394,21,0	0/0:19,0:22:41.15:0,41,568	0/0:21,0:24:45.10:0,45,621	0/0:18,0:21:33.01:0,33,478	1/1:14,0:15:20.99:296,21,0	0/1:19,0:22:28.11:59,0,28	0/1:6,0:11:22.58:23,0,81	0/1:33,0:53:97.36:97,0,187	0/0:9,0:9:18.05:0,18,246	1/1:13,0:13:17.84:239,18,0	0/1:11,26:43:20.66:835,0,21	1/1:3,2:8:8.50:96,8,0	0/0:18,0:19:14.63:0,15,259	0/1:11,0:24:47.54:125,0,48	0/0:10,0:10:20.06:0,20,243
chr10	103257155	.	AACACACAC	A	3824.35	PASS	AB=0.819;AC=27;AF=0.500;AN=54;BaseQRankSum=4.640;DP=472;FS=0.000;HRun=0;HaplotypeScore=135.8930;InbreedingCoeff=0.4689;MQ=51.61;MQ0=14;MQRankSum=-6.491;QD=13.96;ReadPosRankSum=2.271;VQSLOD=2.3564;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,9:23:7.19:66,0,7	1/1:3,1:5:6.02:131,6,0	./.	0/0:47,0:14:3.01:0,3,51	0/0:12,0:12:18.06:0,18,687	1/1:10,7:17:32.92:641,33,0	0/1:19,4:20:49.84:324,0,50	1/1:18,0:15:3.01:30,3,0	0/1:15,1:16:8.32:107,0,8	0/0:11,0:10:9:0,9,112	0/0:5,0:5:3.01:0,3,122	1/1:9,6:15:15.01:317,15,0	1/1:5,5:10:12.04:301,12,0	1/1:8,2:11:7.73:215,8,0	0/0:18,0:18:24.08:0,24,767	0/0:8,0:8:6.02:0,6,247	0/0:22,0:24:45.15:0,45,1544	0/1:9,6:15:99:219,0,186	0/1:11,0:12:40.36:130,0,40	1/1:3,0:7:9.03:164,9,0	1/1:41,0:44:15.72:149,16,0	0/0:5,0:5:6.02:0,6,198	0/0:3,0:6:6.42:0,6,44	1/1:26,3:28:17.70:367,18,0	1/1:4,2:7:9.03:226,9,0	0/0:9,0:9:15.05:0,15,487	1/1:12,0:20:24.08:439,24,0	0/0:5,0:10:24.08:0,24,741
chr10	103257706	.	C	CAA	2944.43	PASS	AB=0.867;AC=24;AF=0.429;AN=56;BaseQRankSum=7.422;DP=407;FS=6.050;HRun=13;HaplotypeScore=80.9431;InbreedingCoeff=0.7844;MQ=62.37;MQ0=6;MQRankSum=-5.211;QD=17.95;ReadPosRankSum=-4.093;VQSLOD=1.8971;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,9:29:15.21:596,15,0	1/1:2,1:3:6.02:81,6,0	0/0:17,0:6:1.85:0,2,12	0/0:21,0:6:2.87:0,3,21	0/0:14,0:17:35.27:0,35,284	1/1:7,8:16:29.58:359,30,0	1/1:4,3:8:17.53:188,18,0	0/0:12,0:19:17.91:0,18,74	1/1:9,4:14:23.62:262,24,0	0/0:14,0:14:17.76:0,18,158	0/0:9,0:12:21.28:0,21,220	1/1:12,0:11:14.39:137,14,0	1/1:7,1:10:21.40:196,21,0	1/1:11,4:15:32.97:334,33,0	0/0:17,0:17:35.81:0,36,313	0/0:11,0:11:20.85:0,21,185	0/0:37,0:39:85.43:0,85,719	1/1:9,4:11:26.92:270,27,0	0/0:7,0:13:19.99:0,20,89	0/0:3,0:15:28.60:0,29,119	0/0:0,0:3:7.79:0,8,29	0/0:7,0:7:11.92:0,12,106	1/1:6,3:9:14.99:164,15,0	0/1:7,2:11:3.06:163,0,3	1/1:7,6:14:15.09:390,15,0	0/0:22,0:26:32.03:0,32,388	0/0:2,0:11:24.52:0,25,104	0/1:10,0:10:15.25:15,0,66
chr10	103257728	.	G	GA	6307.13	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=7.378;DP=500;FS=0.814;HRun=7;HaplotypeScore=66.5228;InbreedingCoeff=0.9563;MQ=55.92;MQ0=9;MQRankSum=-7.947;QD=27.30;ReadPosRankSum=0.614;VQSLOD=5.4900;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:28:72.02:794,72,0	1/1:0,3:3:9.03:109,9,0	0/0:46,0:12:14.40:0,14,92	0/0:41,0:12:12.08:0,12,128	0/0:19,0:20:54.03:0,54,510	1/1:3,12:15:36.11:434,36,0	1/1:2,9:11:27.08:326,27,0	1/1:8,12:19:32.99:376,33,0	1/1:1,13:14:39.12:471,39,0	0/0:21,0:21:51.06:0,51,493	0/0:16,0:16:48.07:0,48,461	1/1:3,8:11:27.05:311,27,0	1/1:4,6:10:26.28:284,26,0	1/1:1,15:16:39.12:468,39,0	0/0:16,0:16:36.05:0,36,346	0/0:10,0:10:21.03:0,21,203	0/0:41,0:41:99:0,105,1013	1/1:7,9:14:23.82:250,24,0	1/1:5,6:11:24.06:278,24,0	1/1:3,15:18:45.14:540,45,0	1/1:3,1:4:3.01:32,3,0	0/0:7,0:7:17.98:0,18,174	1/1:2,6:8:21.06:253,21,0	1/1:2,10:12:27.07:307,27,0	1/1:2,14:16:47.60:536,48,0	0/0:26,0:26:74.30:0,74,693	1/1:4,14:17:45.14:540,45,0	0/0:20,0:20:60.10:0,60,579
chr10	103257746	.	GA	G	1652.49	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.751;DP=560;FS=4.570;HRun=8;HaplotypeScore=87.8791;InbreedingCoeff=0.9794;MQ=62.89;MQ0=10;MQRankSum=-4.600;QD=22.95;ReadPosRankSum=-2.081;VQSLOD=3.3334;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:53.99:0,54,614	0/0:6,0:6:18.05:0,18,213	0/0:72,1:25:30.31:0,30,274	0/0:56,0:24:33.49:0,33,346	0/0:20,0:20:60.14:0,60,680	0/0:21,0:21:54.08:0,54,609	0/0:14,0:14:30.09:0,30,362	1/1:1,24:25:66.05:627,66,0	0/0:17,0:17:45.14:0,45,540	0/0:20,0:20:57.17:0,57,688	0/0:16,0:16:42.13:0,42,505	0/0:9,0:9:27.08:0,27,326	0/0:10,0:10:30.04:0,30,345	0/0:13,0:13:30.09:0,30,362	0/0:15,0:15:45.12:0,45,526	0/0:8,0:8:21.06:0,21,253	0/0:42,0:42:99:0,114,1363	0/0:12,0:11:27.04:0,27,310	1/1:2,4:6:12.01:112,12,0	1/1:1,13:14:39.06:375,39,0	1/1:0,5:5:12.01:114,12,0	0/0:6,0:6:18.05:0,18,212	0/0:10,0:10:27.03:0,27,294	0/0:13,0:13:33.10:0,33,395	0/0:20,0:20:60.18:0,60,723	0/0:30,0:30:75.22:0,75,888	1/1:4,18:21:63.07:594,63,0	0/0:29,0:29:74.51:0,75,979
chr10	103258522	.	G	GGGACTCTGT	39383.26	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-3.017;DP=586;FS=5.447;HRun=0;HaplotypeScore=168.5378;InbreedingCoeff=0.9960;MQ=77.37;MQ0=0;MQRankSum=-17.459;QD=99.70;ReadPosRankSum=-1.299;VQSLOD=4.5674;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,13:28:60.21:2677,60,0	1/1:4,10:15:33.11:1514,33,0	0/0:21,0:20:51.15:0,51,1426	0/0:25,0:24:36.59:0,37,1546	0/0:11,0:11:33.09:0,33,829	1/1:2,8:10:24.08:1155,24,0	1/1:25,13:40:90.31:3919,90,0	1/1:20,13:34:96.33:4083,96,0	1/1:5,8:14:30.10:1441,30,0	0/0:24,0:24:60.21:0,60,1780	0/0:8,0:8:24.08:0,24,727	1/1:12,14:28:69.24:3057,69,0	1/1:8,12:21:54.18:2517,54,0	1/1:12,20:36:87.30:3975,87,0	0/0:20,0:20:54.19:0,54,1637	0/0:12,0:12:36.11:0,36,1026	0/0:32,0:32:90.29:0,90,2645	1/1:12,7:19:45.15:2116,45,0	1/1:8,16:24:69.24:3136,69,0	1/1:5,4:13:20.91:949,21,0	1/1:23,25:49:75.26:3426,75,0	0/0:11,0:11:27.09:0,27,818	1/1:3,4:8:15.05:691,15,0	1/1:11,14:28:33.11:1561,33,0	1/1:7,7:14:33.11:1483,33,0	0/0:18,0:18:51.18:0,51,1495	1/1:1,11:13:36.12:1683,36,0	0/0:9,0:9:27.09:0,27,818
chr10	103260716	.	CTAGA	C	3629.98	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.922;DP=734;FS=8.103;HRun=0;HaplotypeScore=176.9541;InbreedingCoeff=0.9993;MQ=89.89;MQ0=0;MQRankSum=-13.796;QD=42.21;ReadPosRankSum=-2.117;VQSLOD=3.2822;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,172,4930	0/0:13,0:13:39.13:0,39,1114	0/0:26,0:26:78.27:0,78,2196	0/0:35,0:35:99:0,102,2700	0/0:21,0:21:60.21:0,60,1719	0/0:25,0:25:72.25:0,72,2079	0/0:33,0:33:99:0,99,2688	1/1:1,11:12:36.08:559,36,0	0/0:40,0:40:99:0,120,3400	0/0:34,0:34:99:0,102,2884	0/0:13,0:13:39.13:0,39,1118	0/0:30,0:30:90.31:0,90,2609	0/0:24,0:24:72.25:0,72,2049	0/0:27,0:27:78.24:0,78,2147	0/0:32,0:32:96.33:0,96,2738	0/0:26,0:26:78.27:0,78,2211	0/0:41,0:41:99:0,123,3505	0/0:29,0:29:87.27:0,87,2442	1/1:1,8:9:24.08:394,24,0	1/1:0,22:22:63.21:978,63,0	1/1:3,23:26:69.02:934,69,0	0/0:28,0:28:84.29:0,84,2427	0/0:30,0:30:90.31:0,90,2573	0/0:32,0:32:96.31:0,96,2692	0/0:17,0:17:51.18:0,51,1478	0/0:25,0:25:75.26:0,75,2172	1/1:1,16:17:48.16:764,48,0	0/0:10,0:10:30.10:0,30,869
chr10	103260723	.	TACG	T	2880.74	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.202;DP=753;FS=11.250;HRun=0;HaplotypeScore=172.7333;InbreedingCoeff=0.9996;MQ=90.50;MQ0=0;MQRankSum=-13.076;QD=33.50;ReadPosRankSum=-1.762;VQSLOD=3.4451;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,169,4053	0/0:12,0:12:36.12:0,36,885	0/0:30,0:30:61.68:0,62,1704	0/0:34,0:34:92.49:0,92,1739	0/0:22,0:22:66.20:0,66,1549	0/0:24,0:24:69.24:0,69,1661	0/0:34,0:34:99:0,102,2454	1/1:0,11:11:33.11:462,33,0	0/0:40,0:40:99:0,120,2815	0/0:35,0:35:99:0,105,2502	0/0:13,0:13:39.13:0,39,941	0/0:34,0:34:99:0,102,2432	0/0:23,0:23:69.24:0,69,1695	0/0:24,0:24:69.24:0,69,1697	0/0:36,0:36:99:0,108,2551	0/0:27,0:27:81.23:0,81,1881	0/0:41,0:41:99:0,120,2800	0/0:29,0:29:87.30:0,87,2056	1/1:1,8:9:27.07:362,27,0	1/1:1,22:23:63.20:830,63,0	1/1:1,23:26:63.04:750,63,0	0/0:29,0:29:87.30:0,87,2105	0/0:33,0:33:96.27:0,96,2202	0/0:34,0:34:99:0,99,2231	0/0:19,0:19:54.13:0,54,1216	0/0:25,0:25:72.22:0,72,1652	1/1:1,16:17:48.15:653,48,0	0/0:13,0:13:36.12:0,36,868
chr10	103261307	.	T	TAC	149.85	PASS	AB=0.639;AC=11;AF=0.275;AN=40;BaseQRankSum=3.622;DP=1051;FS=3.238;HRun=0;HaplotypeScore=53.0012;InbreedingCoeff=0.3760;MQ=30.66;MQ0=268;MQRankSum=1.439;QD=0.58;ReadPosRankSum=-1.912;VQSLOD=0.9331;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,13:14:26.46:26,0,65	./.	./.	./.	0/0:41,0:33:24.05:0,24,281	./.	0/1:14,21:9:0:0,0,0	0/0:27,0:2:6:0,6,62	./.	0/0:87,0:61:99:0,150,1892	0/0:37,0:31:21.05:0,21,255	1/1:18,24:25:3.01:51,3,0	1/1:19,28:20:3.01:51,3,0	1/1:24,16:20:5.95:43,6,0	0/0:72,0:52:45.12:0,45,549	0/0:52,0:42:48.06:0,48,531	0/0:33,0:19:2.92:0,3,17	0/1:6,11:10:29.50:92,0,29	0/0:12,0:1:3:0,3,25	./.	./.	0/0:62,0:42:45.12:0,45,550	0/1:9,12:12:0:0,0,0	0/1:12,15:9:0:0,0,0	./.	0/0:56,0:33:81.24:0,81,1004	0/0:38,0:15:3.01:0,3,38	0/0:19,0:17:30.10:0,30,385
chr10	103261385	.	CGT	C	84.09	PASS	AB=0.800;AC=11;AF=0.289;AN=38;BaseQRankSum=4.956;DP=646;FS=3.322;HRun=0;HaplotypeScore=37.6164;InbreedingCoeff=0.6351;MQ=38.25;MQ0=93;MQRankSum=-0.077;QD=1.29;ReadPosRankSum=-3.677;VQSLOD=0.2965;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,1:6:3.87:23,4,0	./.	0/0:55,0:3:1.51:0,2,30	0/0:45,0:1:0:0,0,0	0/0:18,0:15:18.06:0,18,362	./.	1/1:9,0:4:1.49:84,1,0	0/0:23,0:18:54.18:0,54,988	./.	0/0:71,0:63:99:0,184,3611	0/0:29,0:25:36.12:0,36,695	./.	1/1:12,2:5:5.94:43,6,0	1/1:17,1:7:2.94:18,3,0	0/0:50,0:42:36.06:0,36,671	0/0:44,0:36:45.05:0,45,814	0/0:32,0:18:10.14:0,10,140	1/1:3,0:2:3.01:34,3,0	0/0:5,0:4:12.04:0,12,218	./.	./.	0/0:40,0:35:62.93:0,63,1199	./.	0/1:6,2:4:0:1,0,0	./.	0/0:37,0:30:90.26:0,90,1734	./.	0/0:20,0:19:18.06:0,18,364
chr10	103261415	.	CATAT	C	170.78	PASS	AB=1.000;AC=19;AF=0.396;AN=48;BaseQRankSum=6.131;DP=684;FS=1.102;HRun=0;HaplotypeScore=73.7882;InbreedingCoeff=0.6493;MQ=34.14;MQ0=152;MQRankSum=3.188;QD=1.15;ReadPosRankSum=-4.769;VQSLOD=0.3207;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:6:0.89:2,1,0	1/1:6,1:4:5.98:46,6,0	./.	./.	0/0:18,0:15:15.05:0,15,373	1/1:21,1:9:8.99:78,9,0	./.	0/0:34,0:21:59.35:0,59,1439	1/1:25,1:8:6.01:68,6,0	0/0:47,0:38:99:0,114,2735	0/0:29,0:24:27.04:0,27,462	./.	1/1:16,1:6:2.98:22,3,0	1/1:24,0:13:2.92:25,3,0	0/0:49,0:37:36.10:0,36,775	0/0:39,0:31:33.10:0,33,828	0/0:24,0:11:12:0,12,271	1/1:5,2:4:2.94:18,3,0	0/0:6,0:5:15.05:0,15,378	0/0:15,0:9:18.05:0,18,408	0/0:44,0:31:47.97:0,48,853	0/0:36,0:28:36.12:0,36,913	0/1:19,0:12:21.83:22,0,49	1/1:9,1:6:2.96:23,3,0	1/1:5,0:2:2.99:23,3,0	0/0:41,0:30:87.28:0,87,2063	0/0:16,0:8:9.01:0,9,176	0/0:26,0:25:36.06:0,36,765
chr10	103261419	.	T	TAC	539.12	PASS	AB=0.619;AC=19;AF=0.396;AN=48;BaseQRankSum=4.934;DP=710;FS=6.342;HRun=0;HaplotypeScore=72.9962;InbreedingCoeff=0.7863;MQ=34.99;MQ0=156;MQRankSum=4.038;QD=3.35;ReadPosRankSum=-4.848;VQSLOD=-0.5535;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:5,8:7:0:0,0,0	1/1:4,3:4:6.02:88,6,0	./.	./.	0/0:19,0:16:12.02:0,12,140	1/1:8,16:11:9.03:147,9,0	./.	0/0:33,0:20:48.61:0,49,604	1/1:4,24:10:6.01:67,6,0	0/0:48,0:38:87.23:0,87,1048	0/0:30,0:25:21.04:0,21,242	./.	1/1:7,12:8:6:69,6,0	1/1:11,13:14:3:25,3,0	0/0:50,0:38:27.04:0,27,315	0/0:39,0:31:30.03:0,30,316	0/0:26,0:12:15.03:0,15,176	1/1:4,5:6:3.01:41,3,0	0/0:6,0:5:12.04:0,12,154	0/0:16,0:10:18.04:0,18,218	0/0:45,0:33:51.15:0,51,633	0/0:39,0:31:30.06:0,30,342	1/1:6,12:12:6.01:101,6,0	1/1:6,6:8:8.97:71,9,0	1/1:3,4:4:9.01:98,9,0	0/0:41,0:30:75.16:0,75,903	0/0:17,0:9:12.01:0,12,126	0/0:24,0:24:33.04:0,33,364
chr10	103261481	.	T	TAC	19798.49	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-11.508;DP=1043;FS=1.465;HRun=0;HaplotypeScore=152.8476;InbreedingCoeff=0.9995;MQ=51.30;MQ0=50;MQRankSum=-1.575;QD=34.49;ReadPosRankSum=0.144;VQSLOD=6.0679;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,23:31:71.43:1128,71,0	1/1:1,17:16:36.12:607,36,0	0/0:50,0:26:65.19:0,65,856	0/0:41,0:21:48.14:0,48,594	0/0:44,0:43:99:0,114,1450	1/1:4,37:37:84.29:1396,84,0	1/1:7,11:15:42.13:666,42,0	1/1:14,30:40:22.08:1394,22,0	1/1:11,24:27:60.19:980,60,0	0/0:51,0:49:99:0,141,1756	0/0:40,0:37:99:0,105,1349	1/1:5,33:36:72.24:1186,72,0	1/1:6,34:35:84.29:1413,84,0	1/1:4,28:30:54.18:910,54,0	0/0:60,0:56:99:0,144,1801	0/0:38,0:37:84.24:0,84,1050	0/0:26,0:23:60.17:0,60,748	1/1:5,20:23:66.23:1093,66,0	1/1:2,12:14:36.12:585,36,0	1/1:6,29:33:84.29:1416,84,0	1/1:11,70:77:99:2946,142,0	0/0:44,0:40:99:0,108,1389	1/1:6,31:36:65.72:1113,66,0	1/1:2,19:19:36.12:606,36,0	1/1:4,26:28:69.24:1164,69,0	0/0:54,0:49:99:0,135,1712	1/1:2,24:26:72.24:1194,72,0	0/0:20,0:19:57.19:0,57,733
chr10	103262430	.	T	TAA	1547.74	PASS	AB=0.969;AC=12;AF=0.214;AN=56;BaseQRankSum=-1.887;DP=559;FS=10.116;HRun=14;HaplotypeScore=85.4392;InbreedingCoeff=0.8001;MQ=77.39;MQ0=3;MQRankSum=-1.528;QD=9.16;ReadPosRankSum=-3.777;VQSLOD=0.2486;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:30.42:0,30,444	0/0:9,0:9:23.91:0,24,193	0/1:40,0:27:4.88:5,0,153	0/1:24,0:14:13.12:13,0,34	0/0:19,0:21:23.67:0,24,281	0/0:16,0:16:26.73:0,27,226	0/0:17,0:17:35.70:0,36,301	1/1:6,15:25:53.44:601,53,0	0/0:11,0:11:26.94:0,27,226	0/0:27,0:29:56.49:0,56,498	0/0:16,0:19:38.28:0,38,299	0/0:14,0:14:20.63:0,21,175	0/0:17,0:17:41.80:0,42,344	0/0:12,0:13:23.53:0,24,187	0/0:7,0:8:14.68:0,15,112	0/0:11,0:11:23.96:0,24,200	0/0:43,0:43:99:0,102,847	0/0:18,0:19:53.67:0,54,438	1/1:13,3:18:24.31:223,24,0	1/1:4,8:16:28.76:300,29,0	1/1:2,8:12:24.07:303,24,0	0/0:9,0:11:17.66:0,18,179	0/0:12,0:14:18.03:0,18,179	0/0:23,0:24:41.69:0,42,392	0/0:17,0:18:16.18:0,16,267	0/0:24,0:24:52.36:0,52,450	1/1:13,13:31:17.26:281,17,0	0/0:17,0:20:20.76:0,21,259
chr10	103262675	.	AGAGAGG	A	1869.73	PASS	AB=0.961;AC=25;AF=0.446;AN=56;BaseQRankSum=9.678;DP=462;FS=1.721;HRun=0;HaplotypeScore=121.8128;InbreedingCoeff=0.6963;MQ=50.83;MQ0=29;MQRankSum=-9.185;QD=8.74;ReadPosRankSum=-4.447;VQSLOD=1.0359;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,14:24:41.36:404,41,0	0/0:3,0:3:0:0,0,0	0/0:16,0:11:1.67:0,2,232	0/0:35,0:9:12.29:0,12,244	0/0:21,0:18:39.13:0,39,813	1/1:11,4:15:11.18:154,11,0	1/1:11,11:21:17.72:225,18,0	0/0:14,0:13:20.36:0,20,117	1/1:15,6:19:18.73:157,19,0	0/0:23,0:23:50.05:0,50,1133	0/0:14,0:12:30.10:0,30,703	1/1:13,4:16:6.44:81,6,0	1/1:6,7:10:11.72:254,12,0	1/1:5,4:9:10.43:136,10,0	0/0:13,0:12:32.24:0,32,611	0/0:19,0:17:23.21:0,23,708	0/0:30,0:29:75.42:0,75,1469	1/1:3,3:6:12.04:242,12,0	0/1:11,0:10:32.23:32,0,54	1/1:17,0:16:2.47:15,2,0	0/0:12,0:11:2.66:0,3,7	0/0:13,0:13:12.87:0,13,341	1/1:3,11:14:17.95:176,18,0	0/1:13,2:11:0:0,0,0	1/1:9,6:15:15.02:150,15,0	0/0:27,0:25:49.23:0,49,1190	0/1:14,0:14:6.74:40,0,7	0/0:8,0:6:18.06:0,18,343
chr10	103262681	.	G	GGA	1446.47	PASS	AB=1.000;AC=24;AF=0.462;AN=52;BaseQRankSum=10.416;DP=462;FS=0.000;HRun=0;HaplotypeScore=108.3217;InbreedingCoeff=0.7641;MQ=52.50;MQ0=28;MQRankSum=-8.319;QD=8.08;ReadPosRankSum=-5.157;VQSLOD=1.8471;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,5:24:41.78:408,42,0	./.	0/0:21,0:12:14.86:0,15,170	0/0:40,0:10:1.79:0,2,161	0/0:26,0:23:51.16:0,51,640	1/1:11,0:11:12.50:138,13,0	1/1:24,1:24:17.88:203,18,0	0/0:18,0:16:30.75:0,31,224	1/1:16,1:16:13.64:120,14,0	0/0:23,0:23:56.38:0,56,688	0/0:14,0:12:30.10:0,30,378	1/1:12,1:12:6.48:63,6,0	1/1:13,0:10:13.36:148,13,0	1/1:8,0:8:11.76:88,12,0	0/0:17,0:16:19.47:0,19,455	0/0:17,0:15:39.08:0,39,474	0/0:33,0:32:79.19:0,79,928	1/1:3,2:5:12.04:163,12,0	0/1:11,0:10:21.86:22,0,53	1/1:13,0:12:0.45:1,0,0	0/1:10,0:9:0:0,0,0	0/0:14,0:14:16.28:0,16,212	1/1:14,0:14:17.92:159,18,0	./.	1/1:14,0:14:12:126,12,0	0/0:28,0:26:62.42:0,62,770	0/0:10,0:10:2.28:0,2,12	0/0:8,0:6:18.06:0,18,225
chr10	103262692	.	GAAACAGAGAC	G	1060.61	PASS	AB=1.000;AC=23;AF=0.442;AN=52;BaseQRankSum=10.609;DP=475;FS=12.223;HRun=0;HaplotypeScore=150.3535;InbreedingCoeff=0.4279;MQ=54.26;MQ0=19;MQRankSum=-10.571;QD=5.58;ReadPosRankSum=-3.299;VQSLOD=1.2358;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:28.64:133,29,0	./.	0/0:28,0:14:31.56:0,32,516	0/0:54,0:11:24.74:0,25,392	0/0:25,0:22:57.18:0,57,2070	1/1:9,0:9:0.81:50,1,0	0/1:21,0:20:9.93:10,0,77	1/1:17,0:15:22.15:360,22,0	0/1:16,0:15:3.55:41,0,4	0/0:27,0:27:47.16:0,47,2485	0/0:16,0:15:33.10:0,33,1117	0/1:10,0:10:3.47:18,0,3	1/1:12,0:9:2.58:111,3,0	0/1:8,0:8:18.23:18,0,58	0/0:18,0:17:5.48:0,5,1778	0/0:21,0:20:57.17:0,57,2185	0/0:35,0:34:60.69:0,61,3340	0/1:6,0:6:10.31:36,0,10	1/1:10,1:10:6.46:230,6,0	1/1:10,2:12:2.47:24,2,0	0/1:10,0:10:0:0,0,0	0/0:11,0:11:18.32:0,18,756	0/1:16,0:16:5.28:35,0,5	./.	1/1:10,0:10:4.46:35,4,0	0/0:30,0:29:77.72:0,78,3073	1/1:6,2:8:8.37:129,8,0	0/0:10,0:9:27.09:0,27,1075
chr10	103262706	.	CAG	C	1255.75	PASS	AB=0.778;AC=22;AF=0.407;AN=54;BaseQRankSum=9.233;DP=451;FS=10.566;HRun=0;HaplotypeScore=119.9453;InbreedingCoeff=0.4325;MQ=52.05;MQ0=7;MQRankSum=-8.629;QD=7.02;ReadPosRankSum=-0.976;VQSLOD=2.6591;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,14:23:8.61:77,0,9	./.	0/0:23,0:11:19.18:0,19,264	0/0:46,0:10:8.46:0,8,138	0/0:26,0:24:66.21:0,66,1170	1/1:3,4:7:5.91:86,6,0	1/1:4,17:21:21.06:286,21,0	1/1:6,12:16:37.21:416,37,0	1/1:5,7:12:2.80:37,3,0	0/0:24,0:24:69.24:0,69,1252	0/0:12,0:12:30.09:0,30,510	0/1:9,4:12:10.20:65,0,10	1/1:2,7:8:11.98:169,12,0	1/1:5,7:12:6.42:75,6,0	0/0:18,0:18:54.17:0,54,948	0/0:20,0:20:57.19:0,57,1025	0/0:33,0:33:87.20:0,87,1473	0/1:3,4:7:22.26:154,0,22	0/1:8,0:8:12.16:12,0,32	0/1:8,0:8:0:0,0,0	1/1:12,1:13:0.47:2,0,0	0/0:12,0:12:27.09:0,27,475	0/0:3,10:13:0:0,0,0	0/1:8,3:11:0:0,0,0	0/1:1,8:9:0:0,0,0	0/0:33,0:33:96.31:0,96,1691	0/1:7,1:8:24.92:41,0,25	0/0:9,0:9:27.09:0,27,495
chr10	103262710	.	GAC	G	1130.60	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=11.662;DP=434;FS=15.391;HRun=0;HaplotypeScore=118.6595;InbreedingCoeff=0.6949;MQ=51.59;MQ0=6;MQRankSum=-10.854;QD=4.98;ReadPosRankSum=-4.695;VQSLOD=0.1020;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:11.89:102,12,0	1/1:1,0:1:2.97:20,3,0	0/0:17,0:8:0.97:0,1,240	0/1:45,0:9:9.59:10,0,80	0/0:26,0:24:66.23:0,66,1248	1/1:7,0:7:5.89:50,6,0	1/1:21,0:21:20.88:166,21,0	1/1:17,0:15:41.31:285,41,0	1/1:10,2:12:5.98:63,6,0	0/0:24,0:24:72.23:0,72,1327	0/0:13,0:13:30.10:0,30,567	1/1:12,1:12:17.28:116,17,0	1/1:8,0:7:14.96:122,15,0	1/1:12,0:12:17.65:110,18,0	0/0:19,0:19:57.19:0,57,1060	0/0:20,0:20:56.93:0,57,1052	0/0:31,0:31:84.23:0,84,1513	1/1:7,0:7:12.65:96,13,0	1/1:6,0:6:11.54:85,12,0	0/1:6,0:6:0.07:0,0,0	1/1:12,0:12:0.47:2,0,0	0/0:12,0:12:27.08:0,27,488	0/1:11,0:11:0:0,0,0	1/1:10,1:11:8.85:56,9,0	1/1:9,0:9:2.94:18,3,0	0/0:34,0:34:99:0,102,1842	1/1:8,0:8:1.42:22,1,0	0/0:9,0:9:27.09:0,27,516
chr10	103262712	.	CAG	C	435.32	PASS	AB=0.933;AC=19;AF=0.339;AN=56;BaseQRankSum=8.937;DP=447;FS=28.063;HRun=0;HaplotypeScore=128.9518;InbreedingCoeff=0.2432;MQ=48.39;MQ0=6;MQRankSum=-8.011;QD=2.09;ReadPosRankSum=-1.904;VQSLOD=0.6647;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:24:7.72:10,0,8	0/0:2,0:2:1.84:0,2,12	0/0:18,0:7:16.24:0,16,232	0/1:44,0:8:25.90:26,0,45	0/0:26,0:24:66.20:0,66,1176	1/1:9,0:9:4.33:14,4,0	1/1:22,0:22:14.98:77,15,0	1/1:13,4:15:2.74:156,3,0	1/1:12,0:12:3.85:27,4,0	0/0:24,0:24:72.25:0,72,1283	0/0:12,0:12:30.10:0,30,537	0/1:13,0:12:7.26:42,0,7	0/1:10,0:9:3.93:40,0,4	0/1:14,0:14:0.76:16,0,1	0/0:19,0:19:57.20:0,57,1038	0/0:20,0:20:54.19:0,54,990	0/0:33,0:33:85.52:0,86,1499	0/1:7,0:7:7.45:7,0,24	0/1:2,4:6:23.53:147,0,24	0/0:3,2:5:2.94:0,3,18	0/0:9,2:11:2.08:0,2,15	0/0:14,0:14:30.09:0,30,513	0/0:11,0:11:0:0,0,0	1/1:12,0:12:0.34:1,0,0	0/1:9,0:9:0:0,0,0	0/0:35,0:35:99:0,102,1817	0/1:6,2:8:21.20:23,0,21	0/0:9,0:9:27.09:0,27,495
chr10	103262728	.	CAG	C	826.38	PASS	AB=0.775;AC=19;AF=0.339;AN=56;BaseQRankSum=8.237;DP=465;FS=0.622;HRun=0;HaplotypeScore=141.8383;InbreedingCoeff=0.3881;MQ=45.56;MQ0=5;MQRankSum=-8.007;QD=5.01;ReadPosRankSum=-3.346;VQSLOD=2.3644;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,11:20:7.12:91,0,7	1/1:5,0:5:1.18:15,1,0	0/0:11,0:3:8.98:0,9,109	0/0:25,0:4:2.84:0,3,55	0/0:24,0:23:60.21:0,60,1061	1/1:9,1:9:7.22:77,7,0	0/1:8,13:21:0.83:180,0,1	0/0:24,0:20:41.06:0,41,431	1/1:8,5:13:3.02:31,3,0	0/0:27,0:27:69.24:0,69,1206	0/0:12,0:12:24.08:0,24,411	0/1:12,3:14:32.19:135,0,32	1/1:7,6:12:10.31:152,10,0	1/1:9,4:13:5.08:63,5,0	0/0:21,0:21:63.17:0,63,1017	0/0:24,0:24:69.16:0,69,1110	0/0:31,1:32:90.29:0,90,1538	0/1:5,4:9:17.62:157,0,18	0/0:17,0:15:25.30:0,25,397	0/0:9,0:9:2.84:0,3,14	0/1:13,0:13:6.09:6,0,8	0/0:12,0:12:27.09:0,27,485	0/1:4,6:10:0:0,0,0	1/1:9,5:14:10.05:70,10,0	0/0:7,7:14:2.66:0,3,6	0/0:37,0:37:99:0,99,1717	0/1:8,0:8:13.51:14,0,114	0/0:11,0:11:30.09:0,30,518
chr10	103262740	.	GAC	G	742.40	PASS	AB=0.941;AC=27;AF=0.500;AN=54;BaseQRankSum=12.704;DP=470;FS=0.000;HRun=0;HaplotypeScore=148.1566;InbreedingCoeff=0.5652;MQ=42.72;MQ0=5;MQRankSum=-11.226;QD=3.23;ReadPosRankSum=1.359;VQSLOD=2.4927;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,3:22:15.66:54,0,16	1/1:5,0:5:13.20:64,13,0	0/0:13,0:4:12.04:0,12,190	0/0:20,0:10:9.49:0,9,310	0/0:29,0:28:72.23:0,72,1278	1/1:10,4:13:1.92:62,2,0	0/1:21,2:23:26.39:35,0,26	0/1:23,0:19:27.20:27,0,174	1/1:10,1:11:13.82:73,14,0	0/0:26,0:26:75.26:0,75,1358	0/0:14,0:14:33.11:0,33,565	1/1:13,1:14:18.60:167,19,0	1/1:12,2:13:7.64:106,8,0	1/1:11,4:15:21.86:117,22,0	0/0:18,0:18:54.17:0,54,1010	0/0:22,0:22:66.21:0,66,1196	0/0:35,0:35:99:0,99,1831	0/1:8,1:9:4.50:4,0,29	0/1:16,0:14:0.43:0,0,185	1/1:10,0:10:7.02:32,7,0	1/1:13,0:13:5:17,5,0	0/0:12,0:12:30.08:0,30,525	./.	1/1:15,1:16:17.28:113,17,0	1/1:12,4:16:7.93:32,8,0	0/0:36,0:36:99:0,102,1851	1/1:8,0:8:5:30,5,0	0/0:9,0:9:27.09:0,27,520
chr10	103262742	.	C	CAG	3974.17	PASS	AB=0.963;AC=28;AF=0.500;AN=56;BaseQRankSum=12.338;DP=473;FS=1.994;HRun=0;HaplotypeScore=153.1965;InbreedingCoeff=0.6847;MQ=42.78;MQ0=5;MQRankSum=-11.729;QD=17.43;ReadPosRankSum=-1.544;VQSLOD=3.4722;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,10:22:35.24:628,35,0	1/1:1,5:6:15.05:251,15,0	0/0:13,0:5:15.05:0,15,207	0/0:20,0:11:9.48:0,9,282	0/0:29,0:28:72.19:0,72,973	1/1:6,8:13:15.03:248,15,0	0/1:19,4:23:21.37:237,0,21	0/1:22,0:18:12.09:12,0,123	1/1:6,5:11:26.41:332,26,0	0/0:26,0:26:69.23:0,69,973	0/0:13,0:13:32.12:0,32,414	1/1:4,11:15:36.12:605,36,0	1/1:6,6:11:23.08:311,23,0	1/1:9,7:16:18.74:412,19,0	0/0:19,0:19:54.16:0,54,753	0/0:22,0:22:63.21:0,63,901	0/0:36,0:36:99:0,102,1393	1/1:5,4:9:5.63:210,6,0	0/1:16,0:14:12.67:13,0,148	0/1:10,0:10:0.53:30,0,1	1/1:14,0:14:2.56:24,3,0	0/0:12,0:12:27.09:0,27,382	1/1:5,1:6:8.86:122,9,0	1/1:8,8:16:18.06:287,18,0	1/1:9,6:15:19.57:253,20,0	0/0:36,0:36:90.30:0,90,1288	0/0:9,0:9:11.16:0,11,35	0/0:9,0:9:27.09:0,27,385
chr10	103262744	.	GAC	G	3738.96	PASS	AB=0.794;AC=29;AF=0.537;AN=54;BaseQRankSum=13.197;DP=439;FS=2.662;HRun=0;HaplotypeScore=115.5803;InbreedingCoeff=0.7332;MQ=44.32;MQ0=5;MQRankSum=-11.705;QD=19.47;ReadPosRankSum=2.619;VQSLOD=3.9816;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:13:13.11:293,13,0	1/1:6,0:6:15.05:220,15,0	0/0:14,0:5:15.05:0,15,239	0/0:24,0:14:35.89:0,36,485	0/0:30,0:30:78.20:0,78,1306	1/1:13,0:12:15.05:220,15,0	1/1:14,0:14:4.20:125,4,0	0/1:13,11:20:99:385,0,106	1/1:7,0:7:15.05:220,15,0	0/0:26,0:26:69.23:0,69,1253	0/0:14,0:14:35.12:0,35,528	1/1:13,0:13:30.10:428,30,0	1/1:8,0:8:18.06:259,18,0	1/1:12,0:12:21.07:307,21,0	0/0:19,0:19:57.20:0,57,1069	0/0:22,0:22:66.21:0,66,1196	0/0:37,0:37:99:0,105,1851	1/1:7,0:7:18.03:208,18,0	0/1:9,7:14:99:285,0,125	1/1:5,6:11:9:88,9,0	1/1:7,7:14:8.05:94,8,0	0/0:12,0:12:30.09:0,30,531	./.	0/1:14,0:14:3.04:249,0,3	1/1:10,0:10:9.03:133,9,0	0/0:37,0:37:99:0,99,1816	1/1:4,5:9:10.70:227,11,0	0/0:9,0:9:27.09:0,27,510
chr10	103262754	.	GAC	G	540.78	PASS	AB=0.956;AC=27;AF=0.482;AN=56;BaseQRankSum=11.917;DP=468;FS=2.919;HRun=0;HaplotypeScore=139.4696;InbreedingCoeff=0.5428;MQ=48.65;MQ0=3;MQRankSum=-8.752;QD=2.52;ReadPosRankSum=3.693;VQSLOD=2.0025;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,1:21:1.76:44,0,2	1/1:6,0:6:11.87:43,12,0	0/0:21,0:8:21.06:0,21,343	0/0:29,0:17:44.96:0,45,643	0/0:26,0:26:66.22:0,66,1204	1/1:16,0:15:12:42,12,0	0/1:16,0:16:2.82:18,0,3	0/1:26,1:22:53.66:54,0,221	1/1:7,0:7:12.58:46,13,0	0/0:26,0:26:75.13:0,75,1311	0/0:13,0:13:33.09:0,33,551	1/1:14,1:15:23.70:97,24,0	1/1:10,0:10:16.92:64,17,0	1/1:15,0:15:20.45:89,20,0	0/0:21,0:21:63.22:0,63,1164	0/0:21,0:21:63.19:0,63,1162	0/0:37,0:37:99:0,108,1955	1/1:7,1:8:1.90:46,2,0	0/1:10,1:10:26.16:26,0,69	1/1:11,0:11:3.24:28,3,0	0/1:13,0:13:2.05:2,0,10	0/0:15,0:15:39.12:0,39,647	0/1:5,1:5:0.91:19,0,1	1/1:13,0:13:8.95:56,9,0	1/1:11,0:11:5.92:24,6,0	0/0:33,0:33:99:0,99,1790	0/1:8,0:8:5.37:37,0,5	0/0:11,0:11:33.11:0,33,598
chr10	103262756	.	C	CAG	1563.25	PASS	AB=0.948;AC=31;AF=0.554;AN=56;BaseQRankSum=12.441;DP=482;FS=2.121;HRun=0;HaplotypeScore=140.9338;InbreedingCoeff=0.7341;MQ=48.71;MQ0=4;MQRankSum=-8.742;QD=7.04;ReadPosRankSum=2.649;VQSLOD=3.5499;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:21:9.81:65,10,0	1/1:7,0:7:9.58:42,10,0	0/0:24,0:9:23.94:0,24,306	0/0:29,0:17:42.02:0,42,514	0/0:25,0:25:66.21:0,66,925	1/1:16,0:15:13.09:79,13,0	0/1:18,0:18:1.95:12,0,2	0/1:22,5:22:54.35:374,0,54	1/1:7,0:7:12.55:48,13,0	0/0:25,0:25:72.24:0,72,1027	0/0:13,0:13:33.06:0,33,428	1/1:15,0:15:17.87:116,18,0	1/1:10,0:10:15.01:108,15,0	1/1:15,0:15:21.49:100,21,0	0/0:22,0:22:63.21:0,63,902	0/0:22,0:22:63.20:0,63,885	0/0:38,0:38:99:0,102,1457	0/1:8,0:8:18.22:50,0,18	1/1:11,1:11:17.98:179,18,0	1/1:8,2:10:5.99:56,6,0	1/1:10,2:12:3.86:23,4,0	0/0:17,0:17:36.12:0,36,512	1/1:7,0:6:8.84:76,9,0	1/1:16,0:16:11.01:54,11,0	1/1:11,0:11:10.88:82,11,0	0/0:34,0:34:96.30:0,96,1337	1/1:7,2:8:24.07:311,24,0	0/0:11,0:11:30.10:0,30,429
chr10	103262769	.	A	AG	730.02	PASS	AB=0.986;AC=20;AF=0.357;AN=56;BaseQRankSum=13.755;DP=539;FS=7.926;HRun=1;HaplotypeScore=157.6208;InbreedingCoeff=0.1125;MQ=52.21;MQ0=3;MQRankSum=-10.278;QD=2.97;ReadPosRankSum=5.370;VQSLOD=-0.2115;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,1:23:5.40:104,0,5	1/1:8,0:8:0.53:26,1,0	0/0:31,0:12:26.70:0,27,303	0/0:30,0:23:49.17:0,49,691	0/0:25,0:25:66.20:0,66,842	1/1:17,0:16:12.83:89,13,0	0/1:23,1:24:34.27:54,0,34	0/1:24,0:21:47.04:103,0,47	0/1:14,0:14:6.38:6,0,46	0/0:24,0:24:66.21:0,66,857	0/0:14,0:14:39.13:0,39,506	0/1:17,0:17:0.67:51,0,1	0/1:12,0:12:4.88:42,0,5	1/1:15,0:15:19.78:92,20,0	0/0:20,0:20:60.20:0,60,779	0/0:26,0:25:72.22:0,72,919	0/0:40,0:40:99:0,111,1387	0/1:9,0:9:29.40:45,0,29	1/1:13,0:13:7.74:87,8,0	0/1:13,0:13:8.65:9,0,31	0/0:21,0:21:15.42:0,15,82	0/0:20,0:20:51.17:0,51,659	0/1:10,0:9:14.50:32,0,14	0/1:18,2:20:23.56:97,0,24	0/1:15,0:15:23.33:26,0,23	0/0:30,0:30:90.28:0,90,1145	0/1:11,0:10:32.07:42,0,32	0/0:12,0:12:36.10:0,36,452
chr10	103262770	.	GACA	G	6370.02	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=16.010;DP=535;FS=16.554;HRun=0;HaplotypeScore=148.6646;InbreedingCoeff=0.9936;MQ=53.88;MQ0=3;MQRankSum=-8.168;QD=24.22;ReadPosRankSum=-2.046;VQSLOD=3.6771;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,12:21:45.21:490,45,0	1/1:2,6:8:18.04:278,18,0	0/0:34,0:14:26.90:0,27,615	0/0:31,0:24:68.75:0,69,1025	0/0:24,0:24:66.21:0,66,1343	1/1:2,15:16:15.04:247,15,0	1/1:15,10:25:32.35:337,32,0	1/1:18,4:20:47.65:531,48,0	1/1:7,7:14:32.85:376,33,0	0/0:23,0:23:69.24:0,69,1555	0/0:14,0:14:39.13:0,39,773	1/1:3,14:17:39.02:586,39,0	1/1:4,8:12:30:441,30,0	1/1:2,13:15:26.99:411,27,0	0/0:20,0:20:60.20:0,60,1401	0/0:26,0:25:78.25:0,78,1640	0/0:39,0:39:99:0,111,2292	1/1:4,5:9:25.56:332,26,0	1/1:10,4:14:35.92:446,36,0	1/1:7,6:13:20.97:193,21,0	1/1:15,4:19:23.86:148,24,0	0/0:19,0:19:54.18:0,54,969	1/1:7,3:9:17.89:214,18,0	1/1:11,9:20:54.02:580,54,0	1/1:5,10:15:29.76:319,30,0	0/0:30,0:30:90.29:0,90,1931	1/1:6,5:10:32.99:442,33,0	0/0:12,0:12:36.12:0,36,770
chr10	103262775	.	G	GA	8275.29	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=12.085;DP=557;FS=24.484;HRun=1;HaplotypeScore=134.1640;InbreedingCoeff=0.9986;MQ=56.65;MQ0=2;MQRankSum=-10.298;QD=29.14;ReadPosRankSum=-4.677;VQSLOD=2.0141;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,9:21:50.58:596,51,0	1/1:6,4:10:26.97:341,27,0	0/0:35,0:16:27.93:0,28,449	0/0:35,0:28:57.09:0,57,802	0/0:21,0:21:54.14:0,54,671	1/1:17,0:17:44.62:407,45,0	1/1:12,16:29:59.69:662,60,0	1/1:6,19:23:60.16:800,60,0	1/1:7,8:15:39:521,39,0	0/0:19,0:19:57.19:0,57,740	0/0:15,0:15:42.12:0,42,519	1/1:14,3:17:47.98:607,48,0	1/1:9,3:12:33.04:431,33,0	1/1:13,4:17:33:447,33,0	0/0:21,0:21:57.15:0,57,698	0/0:27,0:26:81.21:0,81,1020	0/0:39,0:39:99:0,108,1340	1/1:5,3:9:24.07:321,24,0	1/1:4,11:15:39.10:513,39,0	1/1:7,8:15:29.92:330,30,0	1/1:4,16:20:42.02:419,42,0	0/0:20,0:20:60.18:0,60,763	1/1:3,8:10:21.02:268,21,0	1/1:11,12:23:51.17:698,51,0	1/1:10,6:16:39.01:504,39,0	0/0:27,0:27:78.21:0,78,950	1/1:6,5:10:33.08:410,33,0	0/0:14,0:14:33.11:0,33,428
chr10	103263944	.	TACACACACACACACAC	T	4131.88	PASS	AB=0.880;AC=23;AF=0.411;AN=56;BaseQRankSum=7.686;DP=529;FS=15.977;HRun=0;HaplotypeScore=216.1372;InbreedingCoeff=0.7094;MQ=66.43;MQ0=9;MQRankSum=-6.610;QD=19.77;ReadPosRankSum=1.069;VQSLOD=1.5652;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,4:31:6.02:262,6,0	1/1:6,2:8:3.01:131,3,0	0/0:29,0:19:3.01:0,3,58	0/0:33,0:24:3.01:0,3,47	0/0:19,0:19:30.10:0,30,1982	1/1:8,4:12:12.04:504,12,0	0/1:19,3:22:27.07:125,0,27	0/0:22,0:22:15:0,15,212	1/1:4,6:10:12.04:524,12,0	0/0:21,0:21:33.45:0,33,990	0/0:5,0:7:5.97:0,6,336	1/1:9,5:14:6.49:262,6,0	1/1:11,5:16:17.40:765,17,0	1/1:11,6:17:12.04:524,12,0	0/0:24,0:23:18.06:0,18,1197	0/0:18,0:18:36.12:0,36,2374	0/0:29,0:29:30.09:0,30,1694	1/1:19,5:23:5.04:260,5,0	0/0:16,0:15:14.31:0,14,225	0/0:10,0:13:9.03:0,9,175	0/0:31,0:32:20.10:0,20,686	0/0:11,0:11:21.07:0,21,1291	1/1:4,5:9:6.49:263,6,0	1/1:31,4:35:9.02:381,9,0	1/1:6,3:9:3.01:131,3,0	0/0:16,0:16:31.35:0,31,1718	0/0:12,0:17:15.05:0,15,313	0/0:9,0:10:18.06:0,18,1081
chr10	103264711	.	C	CAGCAAAACCTGTTAGA	1841.19	PASS	AB=0.764;AC=20;AF=0.909;AN=22;BaseQRankSum=-2.969;DP=38;FS=17.258;HRun=0;HaplotypeScore=28.1286;InbreedingCoeff=-0.2321;MQ=129.12;MQ0=0;MQRankSum=-1.263;QD=61.37;ReadPosRankSum=-1.604;VQSLOD=0.7774;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:5,1:8:44.31:461,0,44	0/1:3,0:4:10.60:437,0,11	1/1:2,0:2:6.02:183,6,0	./.	./.	./.	1/1:3,0:3:3.01:119,3,0	1/1:1,0:1:3:28,3,0	./.	./.	./.	1/1:2,0:2:6.02:163,6,0	./.	1/1:2,0:2:3.01:105,3,0	1/1:2,0:2:6.02:152,6,0	./.	./.	./.	1/1:2,0:2:6:147,6,0	1/1:1,0:1:3:25,3,0	./.	./.	./.	1/1:3,0:3:9:105,9,0	./.	./.
chr10	103266425	.	AGGCC	A	9671.77	PASS	AB=0.974;AC=47;AF=0.839;AN=56;BaseQRankSum=-1.879;DP=513;FS=1.812;HRun=0;HaplotypeScore=169.4599;InbreedingCoeff=-0.1498;MQ=55.89;MQ0=1;MQRankSum=-4.343;QD=18.85;ReadPosRankSum=-1.996;VQSLOD=4.5870;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:38:17.85:196,18,0	1/1:16,0:16:21.95:260,22,0	0/1:14,0:11:15.54:16,0,22	0/1:8,0:6:2.94:6,0,3	0/1:17,2:19:72.36:259,0,72	1/1:21,0:21:21.07:257,21,0	1/1:20,0:20:12.04:154,12,0	1/1:3,19:21:57.11:829,57,0	1/1:14,0:14:15.05:186,15,0	0/1:29,0:29:29.40:750,0,29	1/1:3,16:19:39.13:633,39,0	1/1:27,0:27:33:405,33,0	1/1:15,0:15:18.06:219,18,0	1/1:22,0:22:21.06:253,21,0	0/1:17,2:19:60.94:485,0,61	0/1:15,0:15:5.67:410,0,6	0/1:26,0:26:99:311,0,213	1/1:8,0:8:24.03:298,24,0	1/1:0,12:12:30.10:475,30,0	1/1:0,16:16:42.11:578,42,0	1/1:2,9:11:9.03:120,9,0	0/1:19,1:20:99:286,0,107	1/1:19,0:19:18.06:219,18,0	1/1:21,0:21:45:549,45,0	1/1:21,0:21:18.06:221,18,0	0/1:18,0:17:57.65:314,0,58	1/1:10,10:20:60.17:868,60,0	1/1:3,0:3:9.03:117,9,0
chr10	103266426	.	GGCCGGAAGGAAGGAAGGAAT	G	15091.22	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-7.724;DP=510;FS=0.000;HRun=0;HaplotypeScore=264.6176;InbreedingCoeff=0.0688;MQ=55.92;MQ0=1;MQRankSum=-6.400;QD=30.99;ReadPosRankSum=0.980;VQSLOD=3.4970;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,35:38:21.07:1072,21,0	1/1:0,16:16:28.23:1093,28,0	0/1:12,0:9:9.24:9,0,64	0/1:8,0:6:4.72:5,0,37	0/1:19,0:19:26.94:27,0,2221	1/1:0,21:21:21.07:1195,21,0	1/1:0,20:20:12.04:683,12,0	1/1:21,0:20:57.14:849,57,0	1/1:0,14:14:15.05:853,15,0	0/1:29,0:29:99:425,0,2065	0/1:19,0:19:2.36:2,0,959	1/1:0,26:26:32.85:1883,33,0	1/1:0,15:15:18.06:1027,18,0	1/1:0,22:22:21.07:1196,21,0	0/1:21,0:21:99:147,0,1901	0/1:15,0:15:62.09:62,0,1556	0/1:26,0:26:99:197,0,3285	1/1:8,0:8:19.39:463,19,0	1/1:12,0:12:27.33:382,27,0	0/1:16,0:16:81.02:115,0,81	0/1:11,0:11:29.17:29,0,41	0/0:20,0:20:31.96:0,32,2473	1/1:0,19:19:17.65:1026,18,0	1/1:21,0:21:45.13:767,45,0	1/1:0,21:21:18.06:1023,18,0	0/1:17,0:16:99:234,0,1180	1/1:20,0:20:37.65:326,38,0	0/0:3,0:3:9.02:0,9,168
chr10	103270253	.	ATGTGTG	A	1856.44	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.605;DP=833;FS=3.681;HRun=0;HaplotypeScore=194.5818;InbreedingCoeff=0.8155;MQ=57.11;MQ0=10;MQRankSum=-1.378;QD=15.73;ReadPosRankSum=-2.591;VQSLOD=2.4364;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:45:69.67:0,70,1832	0/0:10,0:12:27.09:0,27,684	0/0:26,0:15:3.01:0,3,66	0/0:26,0:13:2.88:0,3,15	0/0:23,0:26:69.23:0,69,1809	0/0:30,0:30:75.23:0,75,1983	0/0:25,0:28:51.16:0,51,1041	1/1:26,21:44:45.13:821,45,0	0/0:27,0:27:55.63:0,56,1433	0/0:33,0:32:71.32:0,71,1616	0/0:21,0:28:27.25:0,27,931	0/0:23,0:23:45.05:0,45,1131	0/0:39,0:40:78.25:0,78,2179	0/0:18,0:24:35.69:0,36,778	0/0:39,0:40:99:0,99,2626	0/0:30,0:31:69.24:0,69,2010	0/0:32,0:33:69.73:0,70,1872	0/0:28,0:29:54.10:0,54,1431	1/1:13,2:12:6.70:127,7,0	1/1:9,22:30:7.14:304,7,0	0/0:26,20:46:2.82:0,3,15	0/0:25,0:27:54.17:0,54,1456	0/0:43,0:44:92.58:0,93,2489	0/0:23,0:24:42.14:0,42,1202	0/0:12,0:18:17.32:0,17,856	0/0:10,0:28:46.63:0,47,655	1/1:5,19:24:36.12:752,36,0	0/0:7,0:25:33.09:0,33,405
chr10	103270381	.	GTA	G	10207.84	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=7.397;DP=890;FS=3.147;HRun=0;HaplotypeScore=131.2335;InbreedingCoeff=0.9999;MQ=61.15;MQ0=4;MQRankSum=0.293;QD=30.75;ReadPosRankSum=5.412;VQSLOD=6.8509;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,18:35:40.45:798,40,0	1/1:3,12:15:36.12:494,36,0	0/0:24,0:20:35.29:0,35,584	0/0:31,0:27:57.04:0,57,751	0/0:37,0:37:99:0,108,1763	1/1:3,31:34:78.26:1071,78,0	1/1:0,14:14:33.11:453,33,0	0/0:43,0:43:99:0,117,1951	1/1:0,39:39:99:1395,102,0	0/0:51,0:51:99:0,141,2342	0/0:31,0:31:87.27:0,87,1475	1/1:1,27:28:61.08:826,61,0	1/1:1,40:41:99:1358,99,0	1/1:4,22:26:57.19:782,57,0	0/0:49,0:49:99:0,141,2404	0/0:43,0:43:99:0,123,2172	0/0:31,0:31:69.08:0,69,1313	1/1:5,21:26:72.15:946,72,0	0/0:14,0:13:36.11:0,36,606	0/0:46,0:46:99:0,129,2267	0/0:40,0:40:99:0,108,1818	0/0:34,0:34:93.29:0,93,1565	1/1:0,28:27:57.10:783,57,0	1/1:6,13:18:48.15:641,48,0	1/1:1,25:26:48.16:659,48,0	0/0:35,0:35:99:0,99,1737	0/0:29,0:28:81.16:0,81,1301	0/0:20,0:20:54.10:0,54,857
chr10	103271351	.	A	AGAG	10496.32	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-15.547;DP=696;FS=16.032;HRun=0;HaplotypeScore=91.7199;InbreedingCoeff=0.9926;MQ=64.62;MQ0=0;MQRankSum=-2.897;QD=35.34;ReadPosRankSum=3.894;VQSLOD=4.2447;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,37:47:78.27:1595,78,0	1/1:5,7:12:24.08:480,24,0	0/0:29,0:20:32.41:0,32,384	0/0:24,0:18:13.44:0,13,277	0/0:22,0:22:48.15:0,48,673	1/1:6,13:20:30.10:590,30,0	1/1:5,18:24:39.13:797,39,0	0/0:25,0:24:39.12:0,39,531	1/1:3,25:29:60.21:1215,60,0	0/0:25,0:25:63.20:0,63,876	0/0:16,0:16:27.05:0,27,350	1/1:6,14:20:39:748,39,0	1/1:6,17:24:29.89:608,30,0	1/1:5,13:18:27.09:553,27,0	0/0:28,0:28:57.16:0,57,786	0/0:31,0:31:78.11:0,78,1059	0/0:29,0:29:17.92:0,18,879	1/1:5,19:24:39.13:781,39,0	0/0:24,0:24:44.89:0,45,541	0/0:21,0:21:54.10:0,54,713	0/0:40,0:40:99:0,99,1388	0/0:26,0:26:60.16:0,60,826	1/1:5,12:18:30.10:614,30,0	1/1:8,34:43:84.29:1719,84,0	1/1:4,13:18:39.13:796,39,0	0/0:30,0:30:72.23:0,72,1023	0/0:21,0:20:57.19:0,57,821	0/0:6,0:6:15.05:0,15,217
chr10	103272054	.	TA	T	6699.77	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=7.633;DP=604;FS=2.823;HRun=6;HaplotypeScore=72.3802;InbreedingCoeff=0.9996;MQ=75.80;MQ0=0;MQRankSum=0.194;QD=25.77;ReadPosRankSum=4.848;VQSLOD=5.1164;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:35:87.22:933,87,0	1/1:0,13:13:30.08:322,30,0	0/0:15,0:15:33.10:0,33,415	0/0:20,0:20:52.99:0,53,628	0/0:13,0:13:33.11:0,33,434	1/1:1,12:13:36.09:387,36,0	1/1:2,29:31:75.19:806,75,0	0/0:25,0:25:57.17:0,57,723	1/1:2,18:20:42.11:451,42,0	0/0:35,0:35:78.19:0,78,978	0/0:14,0:14:41.97:0,42,472	1/1:2,16:18:42.11:451,42,0	1/1:4,24:28:69.17:740,69,0	1/1:2,18:20:45.11:484,45,0	0/0:27,0:27:74.99:0,75,867	0/0:28,0:28:81.10:0,81,988	0/0:21,0:21:63.20:0,63,818	1/1:2,19:21:42.11:451,42,0	0/0:11,0:11:33.11:0,33,434	0/0:20,0:20:57.10:0,57,707	0/0:29,0:29:81.20:0,81,1028	0/0:23,0:23:57.19:0,57,749	1/1:2,32:34:81.19:870,81,0	1/1:0,12:12:30.07:322,30,0	1/1:0,15:15:45.11:484,45,0	0/0:32,0:32:96.28:0,96,1240	0/0:22,0:22:63.13:0,63,790	0/0:9,0:9:27.07:0,27,340
chr10	103273115	.	A	AACACACACAC	3877.25	PASS	AB=1.000;AC=33;AF=0.660;AN=50;BaseQRankSum=1.930;DP=602;FS=8.253;HRun=0;HaplotypeScore=198.6568;InbreedingCoeff=0.5641;MQ=63.77;MQ0=14;MQRankSum=-5.702;QD=10.15;ReadPosRankSum=-4.666;VQSLOD=0.3302;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:36:0.54:181,1,0	./.	./.	./.	0/0:16,0:19:11.87:0,12,199	1/1:11,0:13:2.99:92,3,0	1/1:23,0:24:7.83:270,8,0	1/1:27,0:27:28.34:604,28,0	1/1:23,0:25:12.09:349,12,0	0/0:12,0:12:3.34:0,3,118	0/0:9,0:9:6.02:0,6,162	1/1:26,0:30:11.86:334,12,0	1/1:16,4:21:3.90:149,4,0	1/1:28,0:28:17.81:400,18,0	0/0:30,0:30:22.70:0,23,544	0/1:19,0:21:48.38:48,0,607	0/0:27,0:25:23.44:0,23,685	1/1:13,0:12:10.78:260,11,0	1/1:17,0:16:4.41:26,4,0	1/1:10,0:8:3.01:96,3,0	1/1:27,0:28:6.49:127,6,0	0/0:24,0:24:18.19:0,18,364	1/1:17,0:14:3.01:91,3,0	1/1:26,4:33:2.92:147,3,0	1/1:12,0:17:5.66:236,6,0	0/0:19,0:20:14.09:0,14,275	1/1:16,0:15:18.05:467,18,0	0/0:3,0:3:1.63:0,2,6
chr10	103274038	.	T	TA	977.63	PASS	AB=0.854;AC=13;AF=0.232;AN=56;BaseQRankSum=-3.755;DP=539;FS=0.517;HRun=14;HaplotypeScore=62.4218;InbreedingCoeff=0.4675;MQ=73.04;MQ0=0;MQRankSum=-0.921;QD=5.85;ReadPosRankSum=-4.097;VQSLOD=1.2495;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:55.90:0,56,364	0/1:6,1:7:15.40:15,0,34	0/1:19,0:15:7.01:7,0,15	0/0:17,0:13:7.69:0,8,43	0/0:19,0:22:15.40:0,15,196	0/0:19,0:19:35.42:0,35,231	0/0:19,0:19:40.70:0,41,257	1/1:12,21:34:28.33:455,28,0	0/0:18,1:23:18.96:0,19,227	0/0:10,0:10:19.25:0,19,110	0/0:23,0:26:33.29:0,33,198	0/0:20,0:22:16.95:0,17,228	0/0:14,0:14:26.51:0,27,172	0/0:19,1:21:8.06:0,8,167	0/0:17,0:17:35.41:0,35,228	0/1:13,2:16:12.20:12,0,175	0/0:26,0:27:60.54:0,61,375	0/0:17,2:19:14.98:0,15,220	1/1:8,8:18:9.42:199,9,0	1/1:3,9:14:23.55:161,24,0	1/1:5,8:13:12:106,12,0	0/0:16,0:17:34.37:0,34,212	0/0:12,2:15:4.85:0,5,136	0/0:16,1:18:14.08:0,14,208	0/0:17,3:23:15.90:0,16,210	0/1:15,1:17:10.93:11,0,142	0/1:6,22:28:8.87:181,0,9	0/0:11,0:14:17.31:0,17,162
chr10	103276552	.	GA	G	742.46	PASS	AB=0.786;AC=13;AF=0.232;AN=56;BaseQRankSum=2.924;DP=526;FS=22.415;HRun=14;HaplotypeScore=67.1684;InbreedingCoeff=0.2755;MQ=58.39;MQ0=6;MQRankSum=1.496;QD=4.01;ReadPosRankSum=2.374;VQSLOD=0.0349;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,1:35:27.37:0,27,438	0/0:11,0:13:17.79:0,18,145	0/0:7,0:4:8.83:0,9,64	0/1:5,2:5:25.55:26,0,30	0/0:20,0:20:16.96:0,17,130	0/0:14,0:14:18.01:0,18,163	0/0:15,0:18:6.67:0,7,238	0/1:8,15:29:29.96:206,0,30	0/0:12,0:13:23.77:0,24,192	0/1:20,2:22:11.22:11,0,179	0/1:12,2:12:0.43:0,0,124	0/0:21,0:21:46.08:0,46,371	0/0:20,0:20:40.14:0,40,328	0/1:18,4:22:2.18:2,0,247	0/0:16,1:17:18.46:0,18,305	0/0:20,1:20:27.27:0,27,361	0/0:38,2:40:49.17:0,49,548	0/0:20,1:22:35.89:0,36,472	0/1:6,8:13:26.39:117,0,26	1/1:3,10:13:26.75:185,27,0	1/1:12,16:30:17.24:247,17,0	0/0:19,0:23:28.42:0,28,302	0/0:17,0:18:2.64:0,3,197	0/0:11,1:18:17.81:0,18,260	0/0:12,2:14:3.43:0,3,171	0/1:11,1:13:9.50:10,0,95	1/1:11,8:20:12.61:96,13,0	0/0:4,0:3:6:0,6,52
chr10	103279278	.	GAGGA	G	2159.08	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=3.067;DP=334;FS=9.163;HRun=0;HaplotypeScore=79.2123;InbreedingCoeff=0.8646;MQ=77.48;MQ0=4;MQRankSum=-5.475;QD=32.23;ReadPosRankSum=-3.650;VQSLOD=1.8205;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.09:0,48,1101	0/0:4,0:4:12.04:0,12,292	0/0:23,0:17:18.51:0,19,432	0/0:36,0:23:16.71:0,17,495	0/0:13,0:13:36.12:0,36,965	0/0:8,0:8:21.06:0,21,506	0/0:15,0:14:36.05:0,36,731	1/1:2,22:24:63.15:1123,63,0	0/0:3,0:3:9.03:0,9,243	0/0:20,0:20:57.20:0,57,1513	0/0:7,0:7:21.07:0,21,531	0/0:10,0:10:30.10:0,30,777	0/0:3,0:3:9.03:0,9,232	0/0:9,0:9:27.08:0,27,673	0/0:1,0:1:3.01:0,3,81	0/0:9,0:9:27.09:0,27,676	0/0:11,0:11:24.06:0,24,549	0/0:20,0:20:51.16:0,51,1304	1/1:1,13:14:39.08:651,39,0	1/1:0,2:2:3.01:57,3,0	1/1:1,17:18:15.05:246,15,0	0/0:4,0:4:12.04:0,12,324	0/0:9,0:9:24.07:0,24,557	0/0:15,0:15:42.14:0,42,1132	0/0:6,0:6:15:0,15,285	0/0:15,0:15:45.15:0,45,1188	1/1:6,3:9:21:246,21,0	0/0:8,0:8:21.03:0,21,505
chr10	103279311	.	AACC	A	1686.41	PASS	AB=0.996;AC=26;AF=0.464;AN=56;BaseQRankSum=-2.453;DP=399;FS=3.424;HRun=0;HaplotypeScore=104.4821;InbreedingCoeff=-0.0553;MQ=58.76;MQ0=15;MQRankSum=-1.106;QD=5.60;ReadPosRankSum=-5.486;VQSLOD=0.5455;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:56.69:228,0,57	0/0:5,0:4:10.11:0,10,63	0/1:30,0:13:21.07:21,0,74	0/0:27,0:11:9.63:0,10,71	0/1:12,0:12:10.78:11,0,98	0/1:8,0:7:44.50:44,0,50	0/0:23,0:22:18.25:0,18,292	1/1:20,4:22:41.50:314,42,0	0/1:12,0:10:60.06:72,0,60	0/1:26,0:24:14.19:14,0,227	0/1:11,0:10:32.93:33,0,80	0/0:8,0:8:10.39:0,10,85	0/0:2,0:1:2.22:0,2,7	0/1:9,0:8:6.54:7,0,34	1/1:5,0:5:7.86:30,8,0	0/1:8,0:8:4.44:107,0,4	0/1:16,0:16:25.70:26,0,100	0/1:15,0:14:27.84:28,0,117	1/1:12,4:15:31.87:392,32,0	1/1:0,2:2:6.02:70,6,0	1/1:8,1:8:19.39:164,19,0	0/0:5,0:5:5.26:0,5,81	0/0:11,0:9:12.41:0,12,92	0/1:22,0:22:19.30:19,0,131	0/0:16,0:15:13.76:0,14,182	0/1:25,0:24:42.27:42,0,160	1/1:2,7:9:15.05:182,15,0	0/1:9,0:9:24.45:58,0,24
chr10	103279313	.	CCAAA	C	860.88	PASS	AB=0.951;AC=11;AF=0.196;AN=56;BaseQRankSum=-0.586;DP=401;FS=1.937;HRun=0;HaplotypeScore=114.8061;InbreedingCoeff=0.4672;MQ=57.38;MQ0=16;MQRankSum=-2.871;QD=8.78;ReadPosRankSum=-4.409;VQSLOD=1.5011;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:32:50.03:0,50,530	0/0:5,0:4:11.49:0,11,143	0/1:32,0:12:17.05:17,0,49	0/0:28,0:11:6.81:0,7,72	0/0:12,0:12:11.30:0,11,292	0/0:7,0:6:17.06:0,17,191	0/0:22,0:22:52.49:0,52,879	0/1:19,4:21:55.43:257,0,55	0/0:12,0:10:7.05:0,7,249	0/0:30,0:28:60.95:0,61,801	0/0:10,0:9:10.45:0,10,270	0/0:9,0:9:22.51:0,23,321	0/0:2,0:1:3.01:0,3,46	0/0:9,0:8:20.08:0,20,251	0/0:4,0:5:8.65:0,9,61	0/1:8,0:8:13.18:13,0,68	0/0:18,0:17:16.50:0,17,439	0/0:12,0:13:19.96:0,20,386	1/1:12,2:14:5.67:265,6,0	1/1:2,0:2:6:56,6,0	1/1:6,3:8:10.01:221,10,0	0/0:5,0:5:15.04:0,15,230	0/0:11,0:9:25.86:0,26,326	0/0:20,0:21:18.94:0,19,360	0/0:16,0:15:41.92:0,42,548	0/0:25,0:25:54.32:0,54,551	1/1:8,1:9:15.03:185,15,0	0/0:8,0:8:1.54:0,2,132
chr10	103279314	.	CA	C	294.45	PASS	AB=0.934;AC=14;AF=0.250;AN=56;BaseQRankSum=1.409;DP=411;FS=7.442;HRun=14;HaplotypeScore=103.1873;InbreedingCoeff=0.1702;MQ=56.96;MQ0=16;MQRankSum=-2.583;QD=1.95;ReadPosRankSum=-1.823;VQSLOD=-0.2242;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,8:32:10.69:260,0,11	0/0:5,0:4:11.90:0,12,94	0/0:35,0:12:5.38:0,5,24	0/1:27,1:10:5.54:6,0,12	0/0:10,2:12:0.87:0,1,92	0/1:6,1:6:25.53:26,0,47	0/0:23,0:22:14.56:0,15,317	0/1:24,0:22:11.20:11,0,31	0/0:12,0:10:13.02:0,13,111	0/0:30,1:29:17.86:0,18,243	0/0:10,0:9:13.09:0,13,70	0/0:9,0:9:18.09:0,18,138	0/0:2,0:1:2.99:0,3,24	0/0:9,0:8:10.03:0,10,75	1/1:5,0:5:10.71:58,11,0	0/0:8,0:8:7.11:0,7,50	0/0:18,0:17:30.46:0,30,204	0/1:14,0:13:16.98:17,0,141	0/1:15,0:14:7.70:22,0,8	0/1:3,0:3:2.18:4,0,2	1/1:9,0:8:4.44:12,4,0	0/1:4,1:5:7.72:8,0,62	0/0:12,0:10:0.91:0,1,38	0/0:22,0:22:29.17:0,29,151	0/0:16,0:15:28.38:0,28,196	0/0:26,1:26:27.68:0,28,314	1/1:9,0:9:7.58:21,8,0	0/0:5,0:9:11.80:0,12,85
chr10	103281902	.	G	GA	1346.41	PASS	AB=0.897;AC=19;AF=0.339;AN=56;BaseQRankSum=0.410;DP=547;FS=6.008;HRun=13;HaplotypeScore=66.9797;InbreedingCoeff=0.0495;MQ=59.00;MQ0=10;MQRankSum=-2.084;QD=4.18;ReadPosRankSum=-2.832;VQSLOD=0.5758;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:41,2:46:35.12:35,0,386	0/0:7,0:9:7.07:0,7,44	0/1:19,0:5:2.79:3,0,21	0/0:8,0:4:3.39:0,3,18	0/0:21,0:22:32.80:0,33,227	0/0:16,0:17:37.70:0,38,252	0/1:22,3:28:30.65:31,0,218	1/1:15,8:23:4.23:320,4,0	0/1:15,1:18:0.13:0,0,119	0/0:16,1:17:6.82:0,7,180	0/0:12,0:12:23.77:0,24,164	0/1:13,1:14:4.11:4,0,120	0/1:9,0:10:21.41:21,0,50	0/0:20,0:20:38.61:0,39,267	0/0:25,1:28:36.52:0,37,387	0/0:25,1:25:0.35:0,0,248	0/1:26,2:30:17.51:18,0,300	0/1:13,2:17:18.93:19,0,160	1/1:18,10:26:41.55:387,42,0	1/1:2,14:16:33.04:306,33,0	0/1:3,5:8:1.02:122,0,1	0/1:14,0:16:4.38:4,0,125	0/0:10,0:11:6.43:0,6,130	0/0:31,1:33:54.26:0,54,357	0/0:18,0:20:45.67:0,46,298	0/1:18,2:21:19.29:19,0,158	0/1:10,5:15:0.11:209,0,0	0/1:10,3:12:7.03:7,0,102
chr10	103282335	.	TTTTC	T	2299.69	PASS	AB=0.928;AC=20;AF=0.417;AN=48;BaseQRankSum=5.055;DP=579;FS=0.000;HRun=0;HaplotypeScore=99.4102;InbreedingCoeff=0.7341;MQ=65.72;MQ0=6;MQRankSum=1.576;QD=9.58;ReadPosRankSum=1.890;VQSLOD=2.3180;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,13:27:21.07:306,21,0	1/1:5,10:15:23.58:362,24,0	./.	./.	0/0:29,0:29:33.09:0,33,693	1/1:13,10:23:14.92:227,15,0	./.	./.	1/1:9,10:19:15.05:227,15,0	0/0:22,0:21:21.07:0,21,463	0/0:15,0:15:18.05:0,18,341	1/1:8,9:17:3.01:45,3,0	1/1:5,11:16:21.07:318,21,0	1/1:8,4:12:9.03:136,9,0	0/0:14,0:14:15.03:0,15,284	0/1:24,1:25:6.34:6,0,592	0/0:29,0:28:39.09:0,39,777	0/1:30,0:34:15.76:131,0,16	0/0:23,0:22:15.04:0,15,199	0/0:18,0:18:23.97:0,24,290	0/0:15,0:15:3.01:0,3,38	0/0:18,0:18:18.05:0,18,358	1/1:9,11:20:23.56:362,24,0	1/1:19,13:32:24.08:363,24,0	0/0:24,0:24:33.11:0,33,728	0/0:27,0:27:39.12:0,39,749	0/0:21,0:20:18.03:0,18,227	0/0:17,0:17:3.01:0,3,56
chr10	103282391	.	CT	C	1028.27	PASS	AB=0.889;AC=10;AF=0.179;AN=56;BaseQRankSum=5.077;DP=492;FS=4.063;HRun=10;HaplotypeScore=73.4685;InbreedingCoeff=0.6234;MQ=61.38;MQ0=7;MQRankSum=-0.053;QD=9.52;ReadPosRankSum=0.272;VQSLOD=2.6166;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:36.20:0,36,281	0/0:13,0:13:21.65:0,22,110	0/1:9,0:4:0.29:0,0,21	0/1:4,0:4:14.07:14,0,72	0/0:25,1:26:48.96:0,49,724	0/0:17,0:17:25.23:0,25,194	0/0:21,0:20:38.90:0,39,411	1/1:7,19:20:11.76:327,12,0	0/0:16,0:16:28.01:0,28,227	0/0:19,0:18:51.14:0,51,564	0/0:13,0:13:30.96:0,31,326	0/0:18,0:18:29.11:0,29,304	0/0:20,0:20:41.33:0,41,338	0/0:13,0:13:30.18:0,30,282	0/0:13,1:14:10.05:0,10,339	0/0:20,1:21:21.10:0,21,436	0/0:25,0:24:63:0,63,638	0/0:29,1:29:27.40:0,27,517	1/1:3,13:15:23.47:308,23,0	1/1:23,0:23:34.45:365,34,0	0/1:1,4:5:4.20:66,0,4	0/0:12,0:12:33.08:0,33,357	0/0:16,1:17:5.40:0,5,152	0/0:23,0:22:49.28:0,49,392	0/0:18,0:18:51.12:0,51,550	0/0:23,0:22:51.14:0,51,564	0/1:25,0:24:0.95:101,0,1	0/0:5,0:5:12.03:0,12,132
chr10	103282392	.	T	TTTCTTTC	2650.63	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=-0.967;DP=497;FS=8.565;HRun=0;HaplotypeScore=119.9113;InbreedingCoeff=0.7958;MQ=61.24;MQ0=7;MQRankSum=-0.548;QD=23.88;ReadPosRankSum=-0.493;VQSLOD=2.4840;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:42.13:0,42,632	0/0:13,0:13:29.42:0,29,530	0/1:9,0:4:1.81:2,0,20	0/1:5,0:4:14.07:14,0,72	0/0:26,0:26:52.10:0,52,1167	0/0:18,0:18:30.04:0,30,473	0/0:21,0:20:38.90:0,39,410	1/1:26,0:20:11.90:327,12,0	0/0:16,0:16:33.10:0,33,499	0/0:19,0:18:51.62:0,52,848	0/0:13,0:13:36.98:0,37,545	0/0:18,0:18:30.08:0,30,359	0/0:21,0:21:48.15:0,48,721	0/0:13,0:13:33.10:0,33,449	0/0:15,0:15:13.06:0,13,543	0/0:20,0:20:25.11:0,25,823	0/0:25,0:24:63.87:0,64,1021	0/0:30,0:29:16.84:0,17,749	1/1:16,0:15:45:630,45,0	1/1:1,21:24:54.09:1168,54,0	1/1:5,0:5:12.01:116,12,0	0/0:12,0:12:33.10:0,33,568	0/0:17,0:17:12.04:0,12,596	0/0:23,0:22:57.07:0,57,838	0/0:18,0:18:54.15:0,54,1033	0/0:23,0:22:57.17:0,57,978	1/1:2,23:25:20.89:566,21,0	0/0:5,0:5:12.03:0,12,178
chr10	103284214	.	GAC	G	3104.94	PASS	AB=0.900;AC=11;AF=0.196;AN=56;BaseQRankSum=10.489;DP=672;FS=9.263;HRun=0;HaplotypeScore=80.8262;InbreedingCoeff=0.9109;MQ=73.47;MQ0=5;MQRankSum=-1.440;QD=19.90;ReadPosRankSum=-0.642;VQSLOD=3.2077;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:90.06:0,90,1324	0/0:9,0:9:20.74:0,21,310	0/0:26,1:25:13.10:0,13,663	0/0:25,0:25:54.13:0,54,785	0/0:22,1:23:22.37:0,22,900	0/0:26,1:27:40.36:0,40,1167	0/0:26,0:26:66.14:0,66,965	1/1:8,19:27:54.15:655,54,0	0/0:19,1:20:19.38:0,19,859	0/0:24,0:24:43.01:0,43,690	0/0:9,0:9:21.07:0,21,344	0/0:27,0:27:69.21:0,69,1112	0/0:17,0:17:51.11:0,51,805	0/0:29,0:29:81.25:0,81,1293	0/0:30,0:30:81.28:0,81,1340	0/0:18,0:18:48.16:0,48,775	0/0:24,1:24:66.23:0,66,1091	0/1:24,3:25:3.37:3,0,994	1/1:6,14:20:42.05:485,42,0	1/1:4,13:16:36.07:436,36,0	1/1:5,46:50:99:1437,114,0	0/0:26,0:26:72.25:0,72,1195	0/0:19,0:19:48.15:0,48,759	0/0:20,0:20:48.16:0,48,790	0/0:24,0:24:66.21:0,66,1070	0/0:25,0:25:55.16:0,55,933	1/1:5,9:14:20.57:264,21,0	0/0:28,0:28:78.27:0,78,1277
chr10	103284743	.	CCG	C	625.67	PASS	AC=8;AF=0.200;AN=40;BaseQRankSum=2.194;DP=86;FS=5.093;HRun=0;HaplotypeScore=14.5258;InbreedingCoeff=0.6080;MQ=90.15;MQ0=2;MQRankSum=-2.508;QD=24.06;ReadPosRankSum=-0.801;VQSLOD=2.8824;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:12.04:0,12,215	0/0:1,0:1:3.01:0,3,53	0/0:10,0:5:12.48:0,12,120	0/0:8,0:5:8.83:0,9,66	0/0:1,0:1:3.01:0,3,54	./.	0/0:4,0:4:10.54:0,11,131	1/1:1,9:10:25.96:377,26,0	0/0:4,0:4:9.01:0,9,128	0/0:1,0:1:3.01:0,3,53	./.	0/0:3,0:3:9.01:0,9,131	0/0:3,0:3:9.03:0,9,161	./.	0/0:3,0:3:9.02:0,9,132	0/0:2,0:2:6.02:0,6,108	./.	./.	1/1:0,4:4:12.04:177,12,0	./.	1/1:1,7:8:9.03:132,9,0	0/0:5,0:5:12.02:0,12,163	0/0:1,0:1:3.01:0,3,54	0/0:4,0:4:9.02:0,9,132	0/0:2,0:2:6.02:0,6,107	./.	1/1:4,0:4:6.89:70,7,0	./.
chr10	103285504	.	GCGCACACACACA	G	2136.75	PASS	AB=0.967;AC=16;AF=0.296;AN=54;BaseQRankSum=9.628;DP=407;FS=21.449;HRun=0;HaplotypeScore=135.5987;InbreedingCoeff=-0.3592;MQ=54.76;MQ0=14;MQRankSum=-6.748;QD=8.31;ReadPosRankSum=0.680;VQSLOD=0.9119;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:34:10.81:11,0,366	0/1:7,0:7:33.32:33,0,60	./.	0/0:6,0:3:2.22:0,2,7	0/0:13,0:13:29.91:0,30,1148	0/1:20,0:20:55.84:212,0,56	0/1:23,0:23:77.96:78,0,198	0/1:12,0:10:80.02:80,0,260	0/1:8,0:8:35.89:219,0,36	0/0:17,0:17:23.14:0,23,804	0/0:15,0:13:29.95:0,30,612	0/1:11,1:12:14.93:305,0,15	0/1:5,4:9:0.27:261,0,0	0/1:11,0:10:41.44:175,0,41	0/0:8,0:8:15.05:0,15,838	0/0:7,0:7:21.06:0,21,962	0/0:29,0:29:51.18:0,51,2771	0/1:17,0:17:79.84:218,0,80	0/0:7,0:7:7.40:0,7,129	0/1:6,0:6:56.39:56,0,129	0/1:30,0:28:99:243,0,738	0/0:10,0:10:18.03:0,18,438	0/1:11,0:10:36.74:229,0,37	0/1:24,0:22:58.42:67,0,58	0/1:16,0:16:88.09:88,0,210	0/0:17,0:17:33:0,33,729	0/1:14,0:14:13.12:13,0,781	0/0:17,0:17:44.77:0,45,1336
chr10	103285506	.	GCACACACACA	G	3522.28	PASS	AB=0.753;AC=22;AF=0.423;AN=52;BaseQRankSum=5.708;DP=411;FS=19.584;HRun=0;HaplotypeScore=122.3477;InbreedingCoeff=0.6890;MQ=53.99;MQ0=14;MQRankSum=-7.024;QD=19.04;ReadPosRankSum=3.156;VQSLOD=1.2124;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,10:32:58.93:90,0,59	1/1:4,3:7:3.48:90,3,0	./.	./.	0/0:13,0:13:21.07:0,21,916	1/1:7,13:20:18.06:538,18,0	1/1:12,9:21:6.02:180,6,0	0/0:18,0:16:30.10:0,30,972	1/1:3,5:8:15.05:441,15,0	0/0:13,0:18:20.43:0,20,525	0/0:16,0:14:12.01:0,12,377	1/1:6,7:13:14.79:389,15,0	1/1:7,1:9:11.71:347,12,0	1/1:7,5:10:4.53:340,5,0	0/0:12,0:12:24.08:0,24,1053	0/0:8,0:9:24.08:0,24,959	0/0:26,0:27:52.52:0,53,2163	1/1:8,6:15:15.05:428,15,0	0/0:8,0:8:9.31:0,9,138	0/0:7,0:7:3.01:0,3,139	0/0:31,0:29:21.03:0,21,762	0/0:9,0:9:12.03:0,12,285	1/1:4,4:8:8.04:331,8,0	1/1:11,10:19:3.01:90,3,0	0/1:11,6:17:8.95:257,0,9	0/0:14,0:14:21.06:0,21,589	0/0:15,0:14:18.06:0,18,792	0/0:18,0:18:30.10:0,30,1181
chr10	103289630	.	C	CA	6722.65	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.368;DP=743;FS=0.000;HRun=0;HaplotypeScore=92.7103;InbreedingCoeff=0.9994;MQ=89.73;MQ0=2;MQRankSum=-2.425;QD=44.23;ReadPosRankSum=-1.631;VQSLOD=4.2156;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:81.27:0,81,1133	0/0:10,0:10:30.10:0,30,419	0/0:39,0:40:97.99:0,98,1418	0/0:27,0:26:63.16:0,63,826	0/0:30,0:30:90.29:0,90,1241	0/0:21,0:21:57.19:0,57,797	0/0:28,0:28:72.22:0,72,988	1/1:2,43:45:99:2108,132,0	0/0:22,0:22:54.18:0,54,755	0/0:26,0:26:78.26:0,78,1073	0/0:15,0:15:42.14:0,42,587	0/0:30,0:29:84.27:0,84,1158	0/0:24,0:24:69.69:0,70,949	0/0:26,0:26:57.19:0,57,798	0/0:26,0:26:72.24:0,72,1005	0/0:35,0:35:99:0,99,1386	0/0:27,0:27:81.25:0,81,1111	0/0:35,0:34:96.30:0,96,1319	1/1:2,21:23:66.21:1033,66,0	1/1:0,16:16:36.12:576,36,0	1/1:0,50:50:99:2155,135,0	0/0:21,0:21:57.19:0,57,799	0/0:25,0:25:66.18:0,66,905	0/0:28,0:28:57.19:0,57,797	0/0:25,0:24:66.21:0,66,907	0/0:27,0:27:78.25:0,78,1075	1/1:0,17:17:54.18:850,54,0	0/0:8,0:8:24.08:0,24,335
chr10	103289665	.	C	CGT	3449.77	PASS	AB=0.765;AC=24;AF=0.429;AN=56;BaseQRankSum=-4.095;DP=769;FS=3.736;HRun=0;HaplotypeScore=136.7600;InbreedingCoeff=0.0670;MQ=67.40;MQ0=6;MQRankSum=-2.109;QD=6.83;ReadPosRankSum=-1.336;VQSLOD=3.3361;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,14:38:73.18:73,0,86	0/1:8,3:12:33.62:34,0,88	0/0:36,0:28:2.74:0,3,30	0/0:38,0:25:2.93:0,3,18	0/0:17,0:23:20.05:0,20,117	0/1:16,6:22:18.15:167,0,18	0/1:17,12:33:92.68:276,0,93	1/1:34,0:34:22.45:167,22,0	0/1:14,12:27:48.20:280,0,48	0/0:26,0:30:38.45:0,38,422	0/0:15,0:15:14.85:0,15,226	0/1:16,12:28:35.40:334,0,35	1/1:11,1:22:24.43:204,24,0	0/1:10,1:30:5.58:113,0,6	0/0:7,0:21:28.41:0,28,139	0/0:13,0:34:24.76:0,25,199	0/0:29,0:33:62.67:0,63,644	1/1:18,13:33:3.91:214,4,0	1/1:23,1:26:17.65:174,18,0	0/1:19,1:20:23.13:70,0,23	0/1:57,0:56:6.19:46,0,6	0/1:8,0:21:15.44:15,0,63	1/1:11,12:23:20.58:318,21,0	0/1:11,21:33:21.88:540,0,22	0/1:17,8:26:99:280,0,151	0/0:13,0:26:12.81:0,13,91	1/1:16,0:16:11.37:145,11,0	0/0:4,0:6:5.68:0,6,28
chr10	103289698	.	GTC	G	1492.02	PASS	AB=0.994;AC=13;AF=0.232;AN=56;BaseQRankSum=6.618;DP=863;FS=10.337;HRun=0;HaplotypeScore=137.8522;InbreedingCoeff=0.2473;MQ=54.30;MQ0=33;MQRankSum=0.636;QD=5.67;ReadPosRankSum=-2.444;VQSLOD=2.3825;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:85.63:0,86,864	0/0:11,0:11:18.02:0,18,268	0/0:78,0:16:19.27:0,19,200	0/0:94,0:28:26.82:0,27,252	0/1:15,0:14:25.55:26,0,124	0/0:16,0:16:24.02:0,24,260	0/0:38,0:38:61.78:0,62,820	1/1:40,0:40:74.54:581,75,0	0/0:27,0:27:47.79:0,48,512	0/0:31,0:31:63.81:0,64,968	0/0:16,0:16:29.48:0,29,431	0/0:22,0:21:47.91:0,48,531	0/0:16,0:16:14.04:0,14,218	0/0:26,0:26:38.19:0,38,320	0/1:24,0:24:30.92:31,0,163	0/1:32,0:32:55.70:56,0,157	0/0:37,0:37:76.40:0,76,1314	0/0:24,0:23:30.08:0,30,318	0/1:20,1:21:33.49:167,0,33	0/1:21,0:20:25.78:117,0,26	1/1:52,3:52:2.68:319,3,0	0/0:27,0:26:7.47:0,7,217	0/0:22,0:22:26.75:0,27,437	0/0:39,0:39:83.74:0,84,881	0/0:25,0:25:36.11:0,36,658	0/1:29,0:28:52.59:53,0,310	1/1:19,0:19:37.14:300,37,0	0/1:6,0:6:6.53:7,0,80
chr10	103289700	.	C	CTG	3080.92	PASS	AB=0.850;AC=10;AF=0.179;AN=56;BaseQRankSum=-1.827;DP=855;FS=15.647;HRun=0;HaplotypeScore=139.9674;InbreedingCoeff=0.7193;MQ=54.69;MQ0=33;MQRankSum=-4.931;QD=17.71;ReadPosRankSum=-2.729;VQSLOD=2.3705;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:92.75:0,93,1168	0/0:9,0:9:16.17:0,16,202	0/0:84,0:18:35.65:0,36,384	0/0:94,0:29:47.33:0,47,460	0/0:15,0:14:33.11:0,33,444	0/0:16,0:16:14.11:0,14,187	0/0:36,0:36:66.27:0,66,852	1/1:10,28:38:82.09:1053,82,0	0/0:27,0:27:5.53:0,6,406	0/0:31,0:31:75.02:0,75,972	0/0:15,0:15:33.11:0,33,446	0/1:21,0:20:5.15:5,0,298	0/0:15,0:15:0.06:0,0,157	0/0:26,0:26:30.34:0,30,337	0/0:23,0:23:54.16:0,54,699	0/0:33,0:33:80.82:0,81,998	0/0:36,0:36:90.20:0,90,1307	0/0:24,0:24:24.27:0,24,328	1/1:15,5:20:39.22:565,39,0	0/1:12,9:20:8.06:257,0,8	1/1:48,6:51:42.28:827,42,0	0/0:28,0:27:50.13:0,50,601	0/0:24,0:24:41.68:0,42,431	0/0:36,0:36:36.01:0,36,611	0/0:24,0:24:41.41:0,41,441	0/0:27,0:26:66.20:0,66,864	1/1:17,3:19:32.25:539,32,0	0/0:6,0:6:18.06:0,18,229
chr10	103290499	.	A	ATATGCTGTC	7181.13	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-4.769;DP=677;FS=14.321;HRun=0;HaplotypeScore=194.4304;InbreedingCoeff=0.9814;MQ=79.11;MQ0=1;MQRankSum=-11.635;QD=71.81;ReadPosRankSum=-2.907;VQSLOD=3.3041;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.25:0,78,2329	0/0:11,0:11:33.11:0,33,1043	0/0:24,0:23:57.14:0,57,1517	0/0:27,0:25:53.77:0,54,1250	0/0:19,0:19:51.16:0,51,1467	0/0:12,0:12:36.12:0,36,1138	0/0:35,0:35:99:0,105,3155	1/1:8,20:30:81.25:3425,81,0	0/0:36,0:36:99:0,105,3169	0/0:22,0:22:63.22:0,63,1927	0/0:19,0:19:57.18:0,57,1598	0/0:35,0:35:99:0,100,2960	0/0:30,0:30:90.25:0,90,2526	0/0:25,0:25:75.26:0,75,2307	0/0:34,0:34:96.31:0,96,2862	0/0:33,0:33:87.26:0,87,2512	0/0:16,0:16:45.12:0,45,1349	0/0:36,0:36:99:0,99,2988	1/1:4,11:17:48.16:1945,48,0	1/1:1,16:18:18.06:814,18,0	1/1:13,11:24:11.35:408,11,0	0/0:15,0:15:45.15:0,45,1365	0/0:18,0:18:54.17:0,54,1533	0/0:44,0:44:99:0,126,3656	0/0:23,0:23:63.22:0,63,1900	0/0:24,0:24:72.23:0,72,2130	1/1:0,9:10:12.04:588,12,0	0/0:8,0:8:21.07:0,21,664
chr10	103290529	.	CGTGCGT	C	506.72	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=5.720;DP=664;FS=6.163;HRun=0;HaplotypeScore=137.1283;InbreedingCoeff=0.8335;MQ=59.46;MQ0=18;MQRankSum=-5.303;QD=25.34;ReadPosRankSum=-1.115;VQSLOD=3.0211;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:84.15:0,84,2490	0/0:10,0:10:30.10:0,30,927	0/0:49,0:22:57.59:0,58,1266	0/0:57,0:26:65.90:0,66,1421	0/0:10,0:10:26.96:0,27,630	0/0:14,0:14:42.13:0,42,1314	0/0:50,0:49:99:0,138,3632	1/1:3,2:5:8.99:162,9,0	0/0:33,0:33:90.29:0,90,2707	0/0:21,0:21:63.17:0,63,1875	0/0:13,0:13:39.13:0,39,1135	0/0:31,0:31:78.49:0,78,2271	0/0:24,0:23:60.21:0,60,1928	0/0:22,0:22:63.21:0,63,1791	0/0:26,0:26:69.10:0,69,2146	0/0:28,0:28:78.24:0,78,2499	0/0:28,0:28:58.10:0,58,1823	0/0:38,0:38:99:0,111,3338	1/1:5,3:5:15:276,15,0	./.	0/0:15,6:19:2.17:0,2,5	0/0:13,0:13:33.09:0,33,874	0/0:16,0:16:42.62:0,43,1339	0/0:43,0:43:99:0,129,4015	0/0:20,0:20:57.20:0,57,1936	0/0:26,0:26:75.18:0,75,2133	1/1:4,3:7:1.16:189,1,0	0/0:9,0:8:21.07:0,21,717
chr10	103290533	.	CGTGT	C	432.78	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=6.325;DP=666;FS=7.445;HRun=0;HaplotypeScore=112.8015;InbreedingCoeff=0.9217;MQ=57.92;MQ0=21;MQRankSum=-5.697;QD=22.78;ReadPosRankSum=-0.626;VQSLOD=2.8078;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:84.17:0,84,1947	0/0:10,0:10:30.05:0,30,713	0/0:48,0:19:52.34:0,52,730	0/0:60,0:23:62.24:0,62,883	0/0:11,0:11:30.01:0,30,454	0/0:13,0:13:39.12:0,39,1010	0/0:49,0:48:99:0,138,2785	1/1:4,0:4:11.96:143,12,0	0/0:36,0:36:99:0,104,2193	0/0:20,0:20:59.99:0,60,1450	0/0:14,0:14:42.09:0,42,905	0/0:28,0:28:81.56:0,82,1780	0/0:27,0:26:69.16:0,69,1540	0/0:25,0:25:71.65:0,72,1410	0/0:30,0:30:81.16:0,81,1809	0/0:28,0:28:75.21:0,75,1959	0/0:28,0:28:76.27:0,76,1479	0/0:42,0:42:99:0,126,2621	1/1:6,1:5:14.98:226,15,0	./.	0/0:11,4:14:0.85:0,1,1	0/0:11,0:11:27.07:0,27,634	0/0:16,0:16:42.59:0,43,1053	0/0:43,0:43:99:0,129,3107	0/0:20,0:20:60.02:0,60,1555	0/0:25,0:25:72.17:0,72,1637	1/1:5,1:7:12.96:196,13,0	0/0:10,0:9:24.06:0,24,592
chr10	103291783	.	G	GA	2071.59	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.587;DP=668;FS=1.381;HRun=11;HaplotypeScore=82.4441;InbreedingCoeff=0.9723;MQ=77.01;MQ0=0;MQRankSum=1.087;QD=18.83;ReadPosRankSum=-2.840;VQSLOD=3.4597;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:50.18:0,50,671	0/0:7,0:7:11.92:0,12,93	0/0:22,0:21:19.10:0,19,167	0/0:16,0:15:13.88:0,14,91	0/0:34,1:35:53.19:0,53,590	0/0:15,0:16:40.89:0,41,308	0/0:20,0:22:42.90:0,43,314	1/1:8,18:27:59.88:574,60,0	0/0:29,0:31:78.73:0,79,586	0/0:28,0:28:62.71:0,63,487	0/0:23,0:23:47.08:0,47,388	0/0:23,0:25:54.82:0,55,404	0/0:26,0:26:76.24:0,76,578	0/0:30,0:30:76.48:0,76,601	0/0:20,0:21:55.82:0,56,424	0/0:27,0:27:59.72:0,60,464	0/0:34,0:34:89.65:0,90,696	0/0:24,0:26:38.15:0,38,383	1/1:10,15:25:12.94:443,13,0	1/1:1,14:15:39:375,39,0	1/1:5,13:21:49.37:443,49,0	0/0:25,0:25:59.74:0,60,461	0/0:20,0:20:38.82:0,39,302	0/0:26,1:28:28.29:0,28,390	0/0:26,1:28:14.27:0,14,411	0/0:19,0:20:31.15:0,31,235	1/1:3,18:22:41.92:411,42,0	0/0:6,0:6:14.93:0,15,116
chr10	103292819	.	A	ATT	7282.21	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-12.738;DP=531;FS=0.000;HRun=9;HaplotypeScore=60.4542;InbreedingCoeff=0.9701;MQ=74.65;MQ0=2;MQRankSum=-1.555;QD=34.51;ReadPosRankSum=2.393;VQSLOD=4.9079;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,23:29:65.71:978,66,0	1/1:1,3:4:6.02:92,6,0	0/0:13,0:13:23.96:0,24,230	0/0:13,0:13:7.08:0,7,141	0/0:30,0:31:68.86:0,69,706	1/1:6,26:33:74.74:1117,75,0	1/1:0,5:5:15.05:231,15,0	0/0:28,0:28:63.06:0,63,656	1/1:3,13:16:36.12:554,36,0	0/0:22,0:22:63.14:0,63,664	0/0:19,0:19:48.10:0,48,502	1/1:2,16:18:42.14:647,42,0	1/1:2,9:13:26.06:340,26,0	1/1:2,14:17:44.64:646,45,0	0/0:16,0:16:42.10:0,42,447	0/0:17,0:17:51.13:0,51,543	0/0:34,0:33:87.20:0,87,926	1/1:3,15:18:39.13:600,39,0	0/0:13,0:13:33.08:0,33,351	0/0:24,0:24:63.14:0,63,670	0/0:16,0:17:44.84:0,45,459	0/0:17,0:17:42.08:0,42,447	1/1:2,21:24:60:869,60,0	1/1:2,8:10:21.07:323,21,0	1/1:0,21:22:59.69:884,60,0	0/0:19,0:20:42.05:0,42,502	0/0:22,0:23:56.83:0,57,587	0/0:13,0:13:33.05:0,33,351
chr10	103293760	.	TTGCC	T	6076.45	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.463;DP=639;FS=2.827;HRun=0;HaplotypeScore=109.9301;InbreedingCoeff=0.9861;MQ=78.83;MQ0=0;MQRankSum=-13.325;QD=51.50;ReadPosRankSum=-2.000;VQSLOD=4.8387;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.22:0,63,1721	0/0:9,0:9:27.09:0,27,731	0/0:21,0:21:51.18:0,51,1322	0/0:17,0:16:39.13:0,39,956	0/0:30,0:30:90.31:0,90,2457	0/0:25,0:24:75.26:0,75,2011	0/0:16,0:16:48.16:0,48,1308	1/1:3,32:35:96.33:1841,96,0	0/0:19,0:19:54.19:0,54,1446	0/0:27,0:27:78.27:0,78,2089	0/0:14,0:14:42.14:0,42,1151	0/0:31,0:31:93.32:0,93,2537	0/0:26,0:26:78.27:0,78,2137	0/0:33,0:33:96.32:0,96,2530	0/0:25,0:25:69.24:0,69,1860	0/0:29,0:29:84.27:0,84,2226	0/0:23,0:23:69.24:0,69,1889	0/0:30,0:30:87.30:0,87,2321	1/1:2,16:18:48.16:930,48,0	1/1:0,28:28:78.27:1506,78,0	1/1:0,5:5:9.03:174,9,0	0/0:18,0:18:54.17:0,54,1420	0/0:25,0:25:69.24:0,69,1846	0/0:16,0:16:48.16:0,48,1309	0/0:18,0:18:54.19:0,54,1464	0/0:34,0:34:99:0,99,2690	1/1:2,30:32:84.29:1626,84,0	0/0:13,0:13:39.13:0,39,1030
chr10	103297158	.	TTC	T	6890.13	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.858;DP=820;FS=3.830;HRun=0;HaplotypeScore=98.7581;InbreedingCoeff=0.9999;MQ=94.98;MQ0=1;MQRankSum=-2.732;QD=42.80;ReadPosRankSum=-0.546;VQSLOD=6.1460;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,2082	0/0:10,0:10:30.10:0,30,572	0/0:43,0:43:99:0,126,2306	0/0:31,0:31:90.31:0,90,1611	0/0:24,0:24:72.25:0,72,1382	0/0:31,0:31:84.29:0,84,1621	0/0:22,0:22:66.21:0,66,1228	1/1:0,44:44:99:1938,132,0	0/0:35,0:35:99:0,105,1975	0/0:28,0:28:81.28:0,81,1517	0/0:16,0:16:48.16:0,48,926	0/0:35,0:35:99:0,99,1813	0/0:32,0:32:93.30:0,93,1749	0/0:26,0:26:72.25:0,72,1390	0/0:39,0:39:99:0,114,2160	0/0:39,0:38:99:0,114,2120	0/0:32,0:32:96.30:0,96,1817	0/0:24,0:24:72.25:0,72,1379	1/1:2,17:19:51.17:775,51,0	1/1:0,28:28:84.29:1286,84,0	1/1:0,29:29:81.28:1240,81,0	0/0:23,0:23:66.20:0,66,1198	0/0:21,0:21:63.22:0,63,1217	0/0:25,0:25:75.26:0,75,1448	0/0:27,0:27:81.28:0,81,1553	0/0:36,0:36:99:0,108,2076	1/1:2,39:41:99:1650,108,0	0/0:23,0:23:66.23:0,66,1273
chr10	103299055	.	GAGTGGGAGGGGA	G	7037.80	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.484;DP=533;FS=7.902;HRun=0;HaplotypeScore=181.2461;InbreedingCoeff=0.9959;MQ=87.80;MQ0=0;MQRankSum=-11.444;QD=76.50;ReadPosRankSum=0.979;VQSLOD=4.2596;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.20:0,57,3422	0/0:7,0:7:21.07:0,21,1249	0/0:21,0:21:51.17:0,51,2743	0/0:25,0:25:75.26:0,75,4087	0/0:20,0:20:60.21:0,60,3461	0/0:20,0:20:57.20:0,57,3494	0/0:19,0:19:54.19:0,54,3129	1/1:6,18:24:51.18:1836,51,0	0/0:19,0:19:57.18:0,57,3155	0/0:19,0:19:57.20:0,57,3270	0/0:10,0:10:30.10:0,30,1759	0/0:25,0:25:75.24:0,75,4054	0/0:20,0:20:60.21:0,60,3621	0/0:26,0:26:78.27:0,78,4252	0/0:21,0:21:63.22:0,63,3905	0/0:32,0:32:93.32:0,93,5450	0/0:21,0:21:63.22:0,63,3541	0/0:28,0:28:81.28:0,81,4710	1/1:2,7:9:21.07:748,21,0	1/1:4,24:28:69.24:2543,69,0	1/1:4,7:11:18.06:585,18,0	0/0:14,0:14:42.14:0,42,2351	0/0:14,0:14:42.13:0,42,2298	0/0:18,0:18:54.19:0,54,3087	0/0:11,0:11:33.10:0,33,1775	0/0:21,0:21:60.21:0,60,3537	1/1:3,17:20:36.12:1325,36,0	0/0:11,0:11:33.11:0,33,2047
chr10	103300133	.	T	TG	6076.45	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.234;DP=712;FS=0.000;HRun=0;HaplotypeScore=76.2713;InbreedingCoeff=0.9999;MQ=75.80;MQ0=0;MQRankSum=-2.948;QD=44.68;ReadPosRankSum=-1.356;VQSLOD=4.4936;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,1891	0/0:13,0:13:36.12:0,36,503	0/0:18,0:18:51:0,51,613	0/0:16,0:16:38.43:0,38,437	0/0:30,0:30:90.29:0,90,1241	0/0:19,0:19:57.19:0,57,784	0/0:24,0:24:66.20:0,66,904	1/1:3,30:33:96.26:1425,96,0	0/0:23,0:23:69.23:0,69,964	0/0:29,0:29:87.29:0,87,1217	0/0:20,0:20:60.20:0,60,839	0/0:35,0:35:99:0,105,1453	0/0:26,0:26:78.26:0,78,1090	0/0:33,0:33:99:0,99,1364	0/0:30,0:30:90.29:0,90,1242	0/0:22,0:22:66.19:0,66,886	0/0:35,0:35:99:0,105,1448	0/0:22,0:22:66.20:0,66,899	1/1:0,13:13:39.13:624,39,0	1/1:2,28:30:81.28:1294,81,0	1/1:1,36:37:99:1679,105,0	0/0:22,0:22:66.22:0,66,922	0/0:25,0:25:75.25:0,75,1048	0/0:28,0:28:84.25:0,84,1139	0/0:19,0:19:57.19:0,57,797	0/0:29,0:29:87.27:0,87,1185	1/1:0,23:23:66.23:1055,66,0	0/0:12,0:12:36.12:0,36,503
chr10	103300574	.	A	AAGAAAAAAAAG	5003.07	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-4.791;DP=552;FS=0.000;HRun=0;HaplotypeScore=153.7810;InbreedingCoeff=0.9152;MQ=60.40;MQ0=12;MQRankSum=-6.271;QD=47.20;ReadPosRankSum=-3.324;VQSLOD=4.0082;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:81.23:0,81,2216	0/0:8,0:8:18.04:0,18,336	0/0:49,0:17:26.93:0,27,418	0/0:39,0:7:0.81:0,1,53	0/0:29,0:29:81.20:0,81,1963	0/0:13,0:13:36.11:0,36,1019	0/0:14,0:14:33.10:0,33,890	1/1:12,0:22:50.61:1143,51,0	0/0:12,0:12:33.10:0,33,922	0/0:17,0:17:48.13:0,48,1079	0/0:9,0:9:24.06:0,24,462	0/0:20,0:19:51.13:0,51,1172	0/0:13,0:13:27.07:0,27,737	0/0:16,0:15:42.13:0,42,1119	0/0:7,0:7:15:0,15,270	0/0:17,0:17:42.08:0,42,1021	0/0:32,0:32:90.19:0,90,2372	0/0:28,0:28:72.08:0,72,1773	1/1:8,0:15:40.31:876,40,0	1/1:4,11:27:27.09:883,27,0	1/1:1,3:12:6.02:328,6,0	0/0:12,0:12:36.10:0,36,903	0/0:16,0:16:36.57:0,37,885	0/0:15,0:15:36.09:0,36,938	0/0:16,0:16:42.13:0,42,1251	0/0:17,0:17:48.13:0,48,1111	1/1:2,17:28:32.83:1773,33,0	0/0:12,0:12:30.04:0,30,657
chr10	103303907	.	TTA	T	2571.82	PASS	AB=0.537;AC=9;AF=0.161;AN=56;BaseQRankSum=4.833;DP=557;FS=10.317;HRun=0;HaplotypeScore=81.0171;InbreedingCoeff=0.8907;MQ=81.25;MQ0=3;MQRankSum=0.138;QD=24.49;ReadPosRankSum=0.615;VQSLOD=4.1034;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,107,1666	0/0:6,0:6:18.04:0,18,293	0/0:53,0:27:9.18:0,9,342	0/0:40,0:21:41.17:0,41,358	0/0:30,0:30:87.02:0,87,1167	0/0:23,0:23:66.15:0,66,1002	0/0:14,0:14:41.81:0,42,622	1/1:17,5:24:38.89:638,39,0	0/0:8,0:8:23.97:0,24,301	0/0:18,0:18:52.89:0,53,731	0/0:16,0:16:42.98:0,43,607	0/0:17,0:17:46.94:0,47,772	0/0:12,0:12:35.14:0,35,595	0/0:17,0:17:39.46:0,39,597	0/0:30,0:30:90.20:0,90,1475	0/0:20,0:20:58.35:0,58,961	0/0:23,0:23:65.95:0,66,920	0/0:11,0:11:22.65:0,23,455	1/1:5,16:24:64.41:722,64,0	1/1:1,23:25:65.03:700,65,0	1/1:0,10:10:12.04:184,12,0	0/0:3,0:3:9.03:0,9,168	0/0:11,0:11:33.08:0,33,516	0/0:9,0:9:24.04:0,24,424	0/0:8,0:8:21.06:0,21,346	0/0:24,0:24:60.09:0,60,934	0/1:3,17:21:0.99:489,0,1	0/0:23,0:23:58.16:0,58,935
chr10	103303908	.	TA	T	448.05	PASS	AB=0.925;AC=14;AF=0.250;AN=56;BaseQRankSum=9.212;DP=557;FS=4.915;HRun=15;HaplotypeScore=78.2284;InbreedingCoeff=0.3899;MQ=81.85;MQ0=3;MQRankSum=-0.508;QD=1.91;ReadPosRankSum=-0.106;VQSLOD=-0.5834;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,3:36:23.73:0,24,557	0/1:6,0:6:3.35:3,0,80	0/1:54,0:27:16.64:17,0,74	0/0:41,1:23:2.28:0,2,143	0/1:24,5:30:30.64:31,0,350	0/0:20,1:23:28.23:0,28,331	0/0:14,0:14:15.15:0,15,230	1/1:23,0:23:4.66:76,5,0	0/0:8,0:8:17.93:0,18,148	0/0:15,3:18:0.36:0,0,233	0/0:14,0:15:22.48:0,22,216	0/0:15,0:17:25.58:0,26,335	0/0:12,0:12:29.87:0,30,246	0/1:12,5:17:0.66:1,0,178	0/0:30,0:30:65.45:0,65,553	0/0:20,0:20:46.39:0,46,417	0/0:19,3:23:9.24:0,9,304	0/0:10,0:11:20.80:0,21,165	1/1:24,0:24:44.36:204,44,0	1/1:25,0:25:33.09:134,33,0	1/1:10,0:10:10.28:40,10,0	0/0:3,0:3:8.99:0,9,76	0/0:10,0:10:23.89:0,24,198	0/0:9,0:9:23.94:0,24,203	0/0:6,0:8:14.84:0,15,120	0/1:22,2:24:9.67:10,0,283	0/1:22,0:21:6.59:94,0,7	0/0:21,0:23:50.33:0,50,391
chr10	103304147	.	GT	G	2841.72	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=10.835;DP=599;FS=2.487;HRun=3;HaplotypeScore=59.5663;InbreedingCoeff=0.9341;MQ=70.00;MQ0=1;MQRankSum=-1.061;QD=24.08;ReadPosRankSum=-2.327;VQSLOD=2.4160;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.24:0,87,1181	0/0:10,0:10:27.09:0,27,387	0/1:10,0:8:0.74:1,0,37	0/0:10,0:10:17.74:0,18,173	0/0:38,0:38:99:0,106,1340	0/0:17,0:17:51.16:0,51,713	0/0:19,0:19:57.08:0,57,755	1/1:4,25:30:72.94:849,73,0	0/0:19,0:19:51.09:0,51,690	0/0:20,0:20:58.07:0,58,788	0/0:27,0:27:80.19:0,80,1012	0/0:24,0:24:72.18:0,72,958	0/0:22,0:22:66.21:0,66,927	0/0:17,0:17:51.17:0,51,731	0/0:26,0:26:77.61:0,78,1051	0/0:29,0:29:79.83:0,80,1117	0/0:24,0:24:71.89:0,72,918	0/0:16,0:16:48.13:0,48,648	1/1:2,21:23:57.15:640,57,0	1/1:3,16:19:45.74:519,46,0	1/1:2,6:8:24.04:269,24,0	0/0:18,0:18:51.12:0,51,661	0/0:20,0:20:60.14:0,60,805	0/0:16,0:16:48.11:0,48,645	0/0:33,0:33:97.53:0,98,1313	0/0:32,0:32:93.25:0,93,1205	1/1:1,27:28:60.19:738,60,0	0/0:15,0:15:45.15:0,45,642
chr10	103304150	.	TA	T	502.76	PASS	AB=0.944;AC=9;AF=0.161;AN=56;BaseQRankSum=13.525;DP=613;FS=2.034;HRun=11;HaplotypeScore=67.1640;InbreedingCoeff=0.5385;MQ=68.28;MQ0=1;MQRankSum=-0.095;QD=4.12;ReadPosRankSum=-0.815;VQSLOD=0.6075;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:84.10:0,84,855	0/0:9,1:10:5.43:0,5,256	0/1:8,2:8:18.45:39,0,18	0/0:8,0:8:15:0,15,137	0/0:37,2:39:62.57:0,63,865	0/0:17,0:17:48.12:0,48,512	0/0:22,0:22:60.09:0,60,608	0/1:31,0:31:45.15:133,0,45	0/0:19,0:19:47.79:0,48,491	0/0:18,1:19:29.50:0,29,519	0/0:28,0:28:71.15:0,71,718	0/0:25,0:25:66.16:0,66,697	0/0:22,0:22:63.16:0,63,672	0/0:18,0:18:54.12:0,54,568	0/0:27,0:27:72.16:0,72,754	0/0:27,1:28:53.57:0,54,775	0/0:24,0:24:63.15:0,63,667	0/0:16,0:16:42.04:0,42,425	0/1:25,0:25:50.90:97,0,51	1/1:19,0:19:5.83:116,6,0	1/1:8,0:8:16.21:72,16,0	0/0:17,0:17:39.10:0,39,416	0/0:20,0:20:54.14:0,54,575	0/0:16,0:16:45.10:0,45,472	0/0:32,1:33:62.58:0,63,871	0/0:34,0:35:84.01:0,84,861	1/1:29,0:29:16.75:197,17,0	0/0:15,0:15:45.10:0,45,472
chr10	103304951	.	TGAGAGAGAGAGA	T	6186.02	PASS	AB=0.686;AC=21;AF=0.375;AN=56;BaseQRankSum=8.155;DP=549;FS=1.875;HRun=0;HaplotypeScore=151.7712;InbreedingCoeff=0.6949;MQ=62.83;MQ0=7;MQRankSum=-10.198;QD=27.99;ReadPosRankSum=2.125;VQSLOD=4.3555;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,22:32:7.59:393,0,8	1/1:3,4:7:3.01:105,3,0	0/0:20,0:10:2.99:0,3,24	0/0:37,0:18:11.35:0,11,84	0/0:16,0:16:36.07:0,36,1431	1/1:5,11:17:24.08:818,24,0	1/1:6,13:19:9.03:313,9,0	0/0:26,0:24:14.52:0,15,299	1/1:8,14:23:25.07:980,25,0	0/0:22,0:22:42.12:0,42,1672	0/0:14,0:16:29.65:0,30,987	1/1:2,11:13:15.02:524,15,0	1/1:7,12:19:12.24:723,12,0	1/1:6,13:19:21.07:734,21,0	0/0:12,0:22:30.08:0,30,1303	0/0:7,0:20:21.06:0,21,1009	0/0:30,0:31:58.65:0,59,2325	0/1:9,3:12:17.46:472,0,17	0/0:15,0:14:29.98:0,30,1256	0/0:9,0:9:6.02:0,6,238	0/0:8,0:12:9.02:0,9,356	0/0:13,0:13:27.08:0,27,903	0/1:10,10:20:2.66:202,0,3	1/1:8,11:18:6.02:210,6,0	1/1:8,12:21:21.07:713,21,0	0/0:10,0:23:57.09:0,57,2536	0/0:15,0:25:12.97:0,13,457	0/0:8,0:20:27.04:0,27,1037
chr10	103306319	.	T	TTAAAAA	3044.97	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-1.919;DP=542;FS=1.075;HRun=0;HaplotypeScore=118.0654;InbreedingCoeff=0.9877;MQ=68.97;MQ0=1;MQRankSum=-5.402;QD=33.83;ReadPosRankSum=-1.478;VQSLOD=2.8861;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,2420	0/0:8,0:8:15.03:0,15,294	0/0:25,0:11:20.39:0,20,145	0/0:19,0:14:19.08:0,19,196	0/0:26,0:27:65.99:0,66,1117	0/0:22,0:22:61.98:0,62,1131	0/0:13,0:13:30.10:0,30,620	1/1:23,1:24:49.17:698,49,0	0/0:13,0:13:27.01:0,27,421	0/0:25,0:25:58.42:0,58,1111	0/0:23,0:23:63.16:0,63,1093	0/0:20,0:20:38.12:0,38,656	0/0:24,0:24:65.56:0,66,1020	0/0:13,0:14:33.08:0,33,576	0/0:26,0:26:69.07:0,69,1303	0/0:11,0:11:30.07:0,30,549	0/0:30,0:30:81.23:0,81,1606	0/0:18,0:18:51.17:0,51,1067	1/1:22,1:22:51.02:857,51,0	1/1:14,1:15:17.56:493,18,0	1/1:7,0:7:17.99:392,18,0	0/0:12,0:12:33.04:0,33,540	0/0:13,0:13:29.45:0,29,534	0/0:9,0:9:21.06:0,21,418	0/0:11,0:11:27.07:0,27,493	0/0:26,0:26:69.16:0,69,1196	1/1:20,1:21:33.04:780,33,0	0/0:18,0:18:50.93:0,51,919
chr10	103306320	.	T	TAAAAATA	4941.26	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-5.192;DP=569;FS=0.456;HRun=0;HaplotypeScore=133.3882;InbreedingCoeff=0.9807;MQ=67.57;MQ0=1;MQRankSum=-5.322;QD=43.73;ReadPosRankSum=-3.445;VQSLOD=4.1929;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:45:99:0,132,2648	0/0:8,0:8:15.04:0,15,325	0/0:24,0:10:18.95:0,19,135	0/0:19,0:14:16.01:0,16,233	0/0:28,0:28:49.41:0,49,1238	0/0:21,0:22:61.93:0,62,1233	0/0:11,0:12:30.10:0,30,680	1/1:10,14:34:80.81:1656,81,0	0/0:11,0:12:29.97:0,30,478	0/0:23,0:25:58.38:0,58,1222	0/0:19,0:22:63.12:0,63,1193	0/0:19,0:20:47.63:0,48,760	0/0:24,0:25:48.92:0,49,1057	0/0:15,0:15:35.95:0,36,599	0/0:27,0:28:71.86:0,72,1431	0/0:12,0:12:30:0,30,595	0/0:30,0:30:81.23:0,81,1743	0/0:17,0:18:51.17:0,51,1167	1/1:9,11:25:62.46:1316,62,0	1/1:5,7:18:23.91:652,24,0	1/1:3,5:10:17.99:462,18,0	0/0:10,0:12:33.05:0,33,586	0/0:12,0:13:12.10:0,12,570	0/0:7,0:9:21.06:0,21,461	0/0:9,0:11:27.02:0,27,541	0/0:25,0:28:72.05:0,72,1269	1/1:5,12:25:29.80:855,30,0	0/0:18,0:18:50.49:0,50,989
chr10	103308438	.	AAGAGAG	A	2080.98	PASS	AB=0.898;AC=23;AF=0.411;AN=56;BaseQRankSum=3.746;DP=585;FS=29.601;HRun=0;HaplotypeScore=145.8625;InbreedingCoeff=0.4274;MQ=65.19;MQ0=8;MQRankSum=-7.654;QD=6.85;ReadPosRankSum=1.951;VQSLOD=1.2866;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,4:20:11.87:70,0,12	1/1:7,1:9:10.28:159,10,0	0/0:35,0:21:2.37:0,2,8	0/1:49,0:25:0:0,0,0	0/0:28,0:31:44.94:0,45,774	1/1:14,6:20:14.92:177,15,0	1/1:10,7:17:3.01:61,3,0	0/0:25,0:25:2.90:0,3,16	1/1:8,10:18:29.97:460,30,0	0/0:21,0:21:34.92:0,35,749	0/0:14,0:14:27.06:0,27,587	1/1:14,3:20:24.03:338,24,0	1/1:8,11:20:25.96:667,26,0	0/1:6,3:10:8.98:55,0,9	0/0:25,0:25:26.79:0,27,568	0/0:13,0:23:21.07:0,21,564	0/0:14,0:16:21.07:0,21,513	0/1:9,5:14:14.16:55,0,14	0/1:18,0:18:48.50:48,0,239	0/0:22,0:22:30.10:0,30,515	0/1:26,0:26:10.77:11,0,261	0/0:16,0:17:18.03:0,18,310	1/1:19,0:19:3:28,3,0	1/1:18,3:21:8.98:129,9,0	0/0:8,1:11:2.49:0,2,9	0/0:25,0:26:55.06:0,55,1144	0/1:23,0:23:6.27:6,0,222	0/0:14,0:14:21.02:0,21,471
chr10	103310150	.	C	CA	4808.82	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.270;DP=678;FS=3.963;HRun=2;HaplotypeScore=66.5630;InbreedingCoeff=0.9999;MQ=79.49;MQ0=0;MQRankSum=-1.261;QD=41.46;ReadPosRankSum=-1.667;VQSLOD=4.3774;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,1271	0/0:11,0:11:33.11:0,33,427	0/0:18,0:18:33.26:0,33,597	0/0:19,0:20:53.62:0,54,629	0/0:42,0:42:99:0,126,1635	0/0:22,0:22:60.19:0,60,779	0/0:19,0:19:48.14:0,48,608	1/1:2,21:23:60.19:878,60,0	0/0:25,0:25:69.22:0,69,895	0/0:32,0:32:96.31:0,96,1246	0/0:28,0:28:81.25:0,81,1037	0/0:21,0:21:60.19:0,60,778	0/0:17,0:17:51.15:0,51,648	0/0:22,0:22:60.19:0,60,779	0/0:29,0:29:81.25:0,81,1037	0/0:30,0:30:87.27:0,87,1115	0/0:25,0:25:72.23:0,72,934	0/0:19,0:19:57.16:0,57,723	1/1:2,16:18:51.17:763,51,0	1/1:0,20:20:57.16:830,57,0	1/1:0,17:17:48.16:719,48,0	0/0:28,0:28:81.25:0,81,1037	0/0:23,0:23:69.22:0,69,895	0/0:22,0:22:66.21:0,66,856	0/0:27,0:27:78.25:0,78,1012	0/0:30,0:30:87.26:0,87,1104	1/1:1,37:38:99:1618,108,0	0/0:15,0:15:45.15:0,45,584
chr10	103310965	.	T	TAA	3549.03	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-6.306;DP=552;FS=15.000;HRun=8;HaplotypeScore=69.7725;InbreedingCoeff=0.9938;MQ=72.59;MQ0=1;MQRankSum=-0.156;QD=33.48;ReadPosRankSum=-3.935;VQSLOD=1.5281;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:87.78:0,88,959	0/0:10,0:10:30.08:0,30,334	0/0:19,0:19:28.29:0,28,330	0/0:12,0:11:16.69:0,17,198	0/0:30,0:30:50.12:0,50,756	0/0:21,0:21:55:0,55,593	0/0:14,0:14:36.09:0,36,400	1/1:8,19:28:56.65:808,57,0	0/0:13,0:13:27.04:0,27,291	0/0:22,0:22:40.05:0,40,559	0/0:27,0:28:46.12:0,46,644	0/0:20,0:20:60.16:0,60,669	0/0:17,0:17:51.13:0,51,564	0/0:17,0:17:44.57:0,45,458	0/0:25,0:25:75.17:0,75,817	0/0:24,0:24:69.18:0,69,769	0/0:23,0:23:60.15:0,60,669	0/0:19,0:19:51.12:0,51,558	1/1:3,16:19:48.16:755,48,0	1/1:2,14:17:44.56:575,45,0	1/1:1,9:9:21.07:333,21,0	0/0:15,0:15:39.07:0,39,415	0/0:15,0:15:36.49:0,36,420	0/0:20,0:20:51.12:0,51,568	0/0:16,0:16:45.12:0,45,500	0/0:25,0:25:63.14:0,63,699	1/1:2,27:31:72.07:1077,72,0	0/0:7,0:7:17.71:0,18,200
chr10	103313441	.	GA	G	1073.17	PASS	AB=0.888;AC=15;AF=0.268;AN=56;BaseQRankSum=5.314;DP=529;FS=8.642;HRun=13;HaplotypeScore=90.7550;InbreedingCoeff=0.4524;MQ=70.17;MQ0=0;MQRankSum=-0.440;QD=5.68;ReadPosRankSum=-0.239;VQSLOD=1.9542;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,2:36:30.14:0,30,566	0/0:9,1:10:2.11:0,2,177	0/1:16,1:15:8.20:8,0,68	0/0:14,0:11:14.70:0,15,111	0/0:29,2:32:11.37:0,11,369	0/0:18,1:20:22.98:0,23,362	0/0:14,0:14:24.26:0,24,235	1/1:11,13:24:37.60:267,38,0	0/0:11,0:11:2.24:0,2,177	0/0:19,0:19:29.88:0,30,276	0/1:12,3:16:25.74:26,0,225	0/0:21,1:22:6.15:0,6,341	0/1:14,2:16:19.67:20,0,216	0/0:15,0:15:18.92:0,19,174	0/1:21,2:23:6.18:6,0,339	0/0:14,0:14:25.28:0,25,236	0/0:27,0:27:69.89:0,70,687	0/0:15,0:15:39.02:0,39,365	1/1:12,4:16:0.33:97,0,0	1/1:8,17:26:58.86:402,59,0	1/1:4,4:8:8.93:66,9,0	0/0:15,2:18:21.13:0,21,324	0/0:15,0:15:39.05:0,39,375	0/0:12,0:12:24.37:0,24,216	0/0:23,2:26:24.19:0,24,561	0/0:19,0:19:23.93:0,24,227	1/1:12,12:25:53.02:348,53,0	0/1:14,2:16:1.77:2,0,300
chr10	103313478	.	TTTCTTTTTTTC	T	2697.57	PASS	AB=0.960;AC=8;AF=0.143;AN=56;BaseQRankSum=6.429;DP=537;FS=10.295;HRun=0;HaplotypeScore=187.3241;InbreedingCoeff=0.7430;MQ=57.02;MQ0=13;MQRankSum=-4.748;QD=29.64;ReadPosRankSum=-1.661;VQSLOD=2.0737;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:92.85:0,93,3246	0/0:13,0:13:39.09:0,39,1519	0/0:25,0:8:15.43:0,15,160	0/0:20,0:6:11.87:0,12,124	0/0:31,0:30:83.63:0,84,3132	0/0:16,0:16:45.14:0,45,1874	0/0:18,0:18:51.14:0,51,1721	0/1:20,0:20:5.20:312,0,5	0/0:13,0:12:35.87:0,36,1210	0/0:22,0:22:50.12:0,50,1967	0/0:21,0:20:59.93:0,60,2154	0/0:21,0:21:56.63:0,57,2021	0/0:13,0:13:39.08:0,39,1116	0/0:15,0:15:33.09:0,33,1171	0/0:15,0:15:45.14:0,45,1784	0/0:7,0:7:12.01:0,12,452	0/0:27,0:27:72.58:0,73,2679	0/0:15,0:15:39.07:0,39,1315	0/1:21,2:23:6.39:660,0,6	1/1:23,0:23:54.81:745,55,0	1/1:4,0:3:8.95:68,9,0	0/0:11,0:11:30.07:0,30,1183	0/0:18,0:18:49.42:0,49,1409	0/0:14,0:14:42.10:0,42,1440	0/0:30,0:30:81.10:0,81,3124	0/0:22,0:22:63.16:0,63,2150	1/1:19,2:21:56.46:1062,56,0	0/0:21,0:20:57.13:0,57,2109
chr10	103313480	.	TCTTTTTTTC	T	3019.26	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.531;DP=535;FS=9.348;HRun=0;HaplotypeScore=164.9397;InbreedingCoeff=0.9039;MQ=56.62;MQ0=15;MQRankSum=-5.401;QD=33.55;ReadPosRankSum=-2.841;VQSLOD=2.2019;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:87.71:0,88,2689	0/0:13,0:13:39.08:0,39,1272	0/0:26,0:8:14.34:0,14,154	0/0:21,0:6:13.63:0,14,98	0/0:32,0:31:83.80:0,84,2600	0/0:15,0:15:45.15:0,45,1572	0/0:18,0:18:51.07:0,51,1448	1/1:21,0:22:48.24:465,48,0	0/0:13,0:12:35.86:0,36,1036	0/0:22,0:22:32.78:0,33,1641	0/0:22,0:21:62.92:0,63,1806	0/0:21,0:21:59.84:0,60,1744	0/0:14,0:14:42.09:0,42,1021	0/0:15,0:15:33.09:0,33,942	0/0:15,0:15:45.14:0,45,1473	0/0:6,0:6:12.02:0,12,377	0/0:27,0:26:56.57:0,57,2219	0/0:15,0:15:42:0,42,1165	1/1:21,1:23:0.01:743,0,0	1/1:17,2:21:59.24:857,59,0	1/1:4,0:3:8.94:68,9,0	0/0:10,0:10:30.09:0,30,990	0/0:18,0:18:50.84:0,51,1167	0/0:15,0:15:45.02:0,45,1245	0/0:28,0:28:80.91:0,81,2619	0/0:21,0:21:63.18:0,63,1857	1/1:16,3:20:20.83:1046,21,0	0/0:21,0:20:57.11:0,57,1761
chr10	103313488	.	TC	T	1310.41	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=8.549;DP=533;FS=0.847;HRun=1;HaplotypeScore=92.1611;InbreedingCoeff=0.8069;MQ=50.46;MQ0=22;MQRankSum=-9.150;QD=11.91;ReadPosRankSum=-4.913;VQSLOD=0.1419;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:71.04:0,71,617	0/0:11,0:10:28.54:0,29,278	0/0:22,0:5:7.46:0,7,38	0/0:18,1:5:1.57:0,2,21	0/0:33,0:32:27.67:0,28,480	0/0:15,0:15:44.31:0,44,412	0/0:20,0:20:55.34:0,55,472	1/1:27,1:27:65.79:439,66,0	0/0:12,0:11:26.48:0,26,237	0/0:21,1:22:24.84:0,25,427	0/0:22,0:21:57.27:0,57,524	0/0:23,0:23:40.25:0,40,403	0/0:12,0:12:35.78:0,36,297	0/0:15,0:15:12.53:0,13,218	0/0:16,0:16:11.10:0,11,301	0/0:8,0:8:12.03:0,12,95	0/0:24,0:23:40.92:0,41,505	0/0:17,0:15:24.53:0,25,285	1/1:19,2:20:26.84:333,27,0	1/1:18,2:20:57.18:405,57,0	1/1:4,0:3:2.98:21,3,0	0/0:13,0:13:19.38:0,19,226	0/1:16,0:16:1.28:1,0,245	0/0:15,0:15:28.67:0,29,296	0/0:28,0:28:76.87:0,77,730	0/0:19,0:18:47.51:0,48,505	1/1:20,1:20:15.84:275,16,0	0/0:19,0:16:44.75:0,45,408
chr10	103314703	.	A	AG	3419.90	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.619;DP=593;FS=14.853;HRun=4;HaplotypeScore=57.7524;InbreedingCoeff=0.9877;MQ=75.40;MQ0=1;MQRankSum=0.260;QD=35.62;ReadPosRankSum=-2.786;VQSLOD=1.5282;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:81.21:0,81,906	0/0:7,0:7:12.03:0,12,136	0/0:16,0:15:13.70:0,14,309	0/0:17,0:14:33.06:0,33,357	0/0:28,0:28:71.69:0,72,791	0/0:12,0:12:36.10:0,36,408	0/0:24,0:24:63.18:0,63,714	1/1:2,25:27:75.22:985,75,0	0/0:18,0:18:51.11:0,51,556	0/0:28,0:28:69.19:0,69,782	0/0:18,0:18:48.14:0,48,544	0/0:26,0:26:69.20:0,69,782	0/0:13,0:13:33.09:0,33,374	0/0:21,0:21:63.16:0,63,703	0/0:23,0:23:63.18:0,63,715	0/0:30,0:30:84.24:0,84,953	0/0:36,0:36:96.27:0,96,1089	0/0:27,0:27:75.19:0,75,839	1/1:1,15:16:45.15:615,45,0	1/1:0,18:18:48.16:656,48,0	1/1:4,13:17:36.12:492,36,0	0/0:12,0:12:36.09:0,36,400	0/0:20,0:20:60.16:0,60,670	0/0:29,0:29:81.20:0,81,897	0/0:23,0:23:57.14:0,57,636	0/0:22,0:22:60.16:0,60,673	1/1:0,17:18:51.14:671,51,0	0/0:15,0:15:45.13:0,45,510
chr10	103315329	.	CTT	C	2392.98	PASS	AB=0.574;AC=8;AF=0.143;AN=56;BaseQRankSum=10.361;DP=534;FS=24.908;HRun=7;HaplotypeScore=75.3923;InbreedingCoeff=0.6650;MQ=76.03;MQ0=2;MQRankSum=-3.984;QD=23.69;ReadPosRankSum=-0.295;VQSLOD=0.9792;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.26:0,93,1562	0/0:7,0:7:21.06:0,21,340	0/0:23,0:19:1.63:0,2,517	0/0:14,0:12:23.87:0,24,306	0/0:23,0:23:69.22:0,69,1172	0/0:24,0:24:72.25:0,72,1259	0/0:15,0:15:42.09:0,42,643	0/1:8,21:29:75.77:661,0,76	0/0:13,0:13:36.12:0,36,630	0/0:23,0:23:66.22:0,66,1130	0/0:10,0:10:27.09:0,27,441	0/0:19,0:19:54.17:0,54,877	0/0:14,0:14:39.13:0,39,678	0/0:16,0:16:45.14:0,45,735	0/0:25,0:25:72.24:0,72,1231	0/0:20,0:20:57.18:0,57,964	0/0:32,0:32:93.29:0,93,1556	0/0:28,0:28:75.24:0,75,1274	1/1:1,15:16:24.15:514,24,0	0/1:5,16:21:13.91:519,0,14	1/1:2,13:15:24.07:306,24,0	0/0:13,0:13:39.12:0,39,652	0/0:13,0:13:39.13:0,39,682	0/0:13,0:12:36.12:0,36,630	0/0:27,0:27:75.23:0,75,1235	0/0:20,0:20:54.18:0,54,943	1/1:4,16:20:28.33:547,28,0	0/0:7,0:7:18.06:0,18,315
chr10	103315371	.	G	GTT	855.69	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.420;DP=559;FS=2.003;HRun=6;HaplotypeScore=87.8727;InbreedingCoeff=0.9496;MQ=69.88;MQ0=4;MQRankSum=-8.702;QD=10.70;ReadPosRankSum=0.104;VQSLOD=-0.1837;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:89.99:0,90,1358	0/0:10,0:10:30.01:0,30,415	0/0:29,0:23:52.12:0,52,609	0/0:21,0:15:24.41:0,24,361	0/0:24,0:23:66.19:0,66,996	0/0:21,0:21:60.19:0,60,945	0/0:23,0:23:54.18:0,54,853	1/1:18,5:23:35.14:334,35,0	0/0:14,0:14:42.11:0,42,613	0/0:31,0:31:90.25:0,90,1342	0/0:16,0:16:42.14:0,42,662	0/0:21,0:21:60.17:0,60,864	0/0:17,0:17:51.17:0,51,819	0/0:14,0:13:39.13:0,39,621	0/0:23,0:23:69.22:0,69,1077	0/0:20,0:20:60.10:0,60,940	0/0:41,0:41:99:0,111,1723	0/0:27,0:27:75.26:0,75,1197	1/1:14,4:15:26.11:235,26,0	1/1:20,2:22:31.39:245,31,0	1/1:4,0:4:2.94:26,3,0	0/0:17,0:17:45.38:0,45,636	0/0:16,0:16:48.16:0,48,751	0/0:18,0:17:48.16:0,48,776	0/0:19,0:19:56.55:0,57,860	0/0:17,0:17:48.16:0,48,751	1/1:8,3:11:13.60:181,14,0	0/0:6,0:6:18.06:0,18,283
chr10	103317161	.	C	CTAGGACAGGCTG	12375.20	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-3.150;DP=786;FS=2.616;HRun=0;HaplotypeScore=259.8810;InbreedingCoeff=0.9990;MQ=86.94;MQ0=0;MQRankSum=-13.528;QD=115.66;ReadPosRankSum=-2.590;VQSLOD=3.9442;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,157,5895	0/0:12,0:12:36.12:0,36,1387	0/0:31,0:31:90.30:0,90,3101	0/0:31,0:31:81.23:0,81,2603	0/0:21,0:21:63.20:0,63,2266	0/0:26,0:26:75.24:0,75,2752	0/0:29,0:29:87.28:0,87,3103	1/1:16,10:27:75.26:4090,75,0	0/0:31,0:31:87.30:0,87,3297	0/0:25,0:25:72.24:0,72,2546	0/0:24,0:24:69.24:0,69,2647	0/0:39,0:39:99:0,108,4221	0/0:25,0:25:75.24:0,75,2780	0/0:30,0:30:87.30:0,87,3375	0/0:48,0:48:99:0,144,5436	0/0:43,0:42:99:0,129,4854	0/0:38,0:38:99:0,114,4440	0/0:24,0:24:54.36:0,54,2683	1/1:8,3:14:36.12:1697,36,0	1/1:13,9:26:42.14:2434,42,0	1/1:4,9:18:24.08:1404,24,0	0/0:30,0:30:87.26:0,87,3170	0/0:23,0:23:69.24:0,69,2638	0/0:35,0:35:99:0,105,3811	0/0:17,0:17:51.14:0,51,1818	0/0:37,0:37:99:0,108,4094	1/1:11,8:22:50.96:2749,51,0	0/0:8,0:8:24.08:0,24,951
chr10	103317878	.	TG	T	3635.75	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.102;DP=663;FS=9.405;HRun=4;HaplotypeScore=45.3474;InbreedingCoeff=0.9575;MQ=47.75;MQ0=53;MQRankSum=4.568;QD=30.55;ReadPosRankSum=-1.330;VQSLOD=2.6839;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:14:36.12:0,36,504	0/0:9,0:5:15.05:0,15,210	0/0:32,0:3:9.03:0,9,126	0/0:27,0:2:6.02:0,6,74	0/0:35,0:28:81.27:0,81,1134	0/0:28,0:20:60.19:0,60,823	0/0:12,0:8:24.08:0,24,335	1/1:1,30:26:78.24:935,78,0	0/0:25,0:20:45.11:0,45,608	0/0:27,0:21:60.20:0,60,840	0/0:24,0:19:57.19:0,57,789	0/0:25,0:21:60.16:0,60,813	0/0:32,0:29:87.27:0,87,1200	0/0:17,0:14:21.07:0,21,294	0/0:20,0:17:48.12:0,48,650	0/0:26,0:23:63.21:0,63,881	0/0:20,0:12:27.09:0,27,378	0/0:23,0:20:48.13:0,48,651	1/1:0,10:9:27.08:324,27,0	1/1:1,27:27:75.23:900,75,0	1/1:2,13:12:33.10:396,33,0	0/0:19,0:16:48.15:0,48,655	0/0:32,0:25:72.24:0,72,1006	0/0:14,0:12:33.11:0,33,462	0/0:26,0:18:57.19:0,57,798	0/0:29,0:23:69.23:0,69,966	1/1:2,33:31:90.28:1080,90,0	0/0:26,0:23:57.66:0,58,799
chr10	103318606	.	TTC	T	15871.63	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=14.730;DP=633;FS=0.000;HRun=0;HaplotypeScore=92.0286;InbreedingCoeff=0.9988;MQ=84.45;MQ0=3;MQRankSum=-4.156;QD=38.15;ReadPosRankSum=2.903;VQSLOD=6.9710;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,42:44:99:1546,105,0	1/1:0,8:8:21.07:309,21,0	0/0:21,0:21:54.18:0,54,982	0/0:19,0:20:26.31:0,26,764	0/0:20,0:20:57.18:0,57,1024	1/1:0,25:24:72.24:1060,72,0	1/1:0,25:25:60.20:884,60,0	1/1:1,25:25:72.23:1039,72,0	1/1:0,25:25:66.22:972,66,0	0/0:25,0:25:75.26:0,75,1388	0/0:8,0:8:24.08:0,24,449	1/1:0,28:28:71.98:1060,72,0	1/1:1,22:23:57.19:839,57,0	1/1:1,25:26:60.20:884,60,0	0/0:29,0:29:87.30:0,87,1623	0/0:24,0:24:69.22:0,69,1260	0/0:31,0:31:90.31:0,90,1673	1/1:0,23:23:60.20:883,60,0	1/1:0,17:17:51.17:751,51,0	1/1:0,20:20:60.20:883,60,0	1/1:0,39:39:99:1536,105,0	0/0:14,0:14:42.14:0,42,787	1/1:0,19:19:51.17:751,51,0	1/1:0,24:23:57.19:839,57,0	1/1:0,22:21:60.20:883,60,0	0/0:16,0:16:48.16:0,48,895	1/1:2,20:22:51.04:751,51,0	0/0:9,0:9:27.09:0,27,506
chr10	103319691	.	A	AAG	6683.76	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-14.358;DP=731;FS=2.573;HRun=0;HaplotypeScore=84.1451;InbreedingCoeff=0.9981;MQ=83.06;MQ0=1;MQRankSum=-1.043;QD=49.15;ReadPosRankSum=-0.137;VQSLOD=5.6545;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,120,1678	0/0:6,0:6:18.06:0,18,252	0/0:24,0:24:69.23:0,69,958	0/0:24,0:24:54.87:0,55,700	0/0:38,0:38:99:0,105,1453	0/0:23,0:23:69.23:0,69,963	0/0:27,0:27:75.22:0,75,1013	1/1:2,33:38:99:1850,108,0	0/0:18,0:18:54.17:0,54,740	0/0:37,0:37:99:0,102,1429	0/0:16,0:16:45.15:0,45,630	0/0:29,0:29:87.11:0,87,1168	0/0:27,0:27:72.24:0,72,1008	0/0:12,0:12:33.11:0,33,462	0/0:29,0:29:87.29:0,87,1218	0/0:36,0:36:99:0,102,1413	0/0:35,0:34:96.32:0,96,1345	0/0:20,0:20:60.16:0,60,816	1/1:1,21:22:63.22:1130,63,0	1/1:1,23:23:63.22:1118,63,0	1/1:1,31:32:87.30:1567,87,0	0/0:25,0:25:60.20:0,60,840	0/0:34,0:34:87.26:0,87,1181	0/0:25,0:25:69.23:0,69,966	0/0:20,0:20:54.18:0,54,746	0/0:26,0:26:72.24:0,72,1008	1/1:1,18:20:57.20:1019,57,0	0/0:19,0:19:57.19:0,57,798
chr10	103320110	.	G	GA	4708.79	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.070;DP=624;FS=4.672;HRun=0;HaplotypeScore=69.2944;InbreedingCoeff=0.9990;MQ=85.34;MQ0=0;MQRankSum=-0.992;QD=40.59;ReadPosRankSum=-1.235;VQSLOD=4.9535;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1425	0/0:7,0:7:21.07:0,21,294	0/0:20,0:20:50.22:0,50,659	0/0:19,0:19:47.33:0,47,672	0/0:24,0:24:72.22:0,72,973	0/0:20,0:20:60.17:0,60,804	0/0:37,0:37:99:0,111,1552	1/1:1,26:27:78.21:1090,78,0	0/0:22,0:22:63.16:0,63,841	0/0:20,0:20:60.20:0,60,839	0/0:12,0:12:33.10:0,33,446	0/0:28,0:28:84.28:0,84,1170	0/0:18,0:18:54.15:0,54,735	0/0:26,0:26:78.25:0,78,1074	0/0:26,0:26:72.24:0,72,1007	0/0:21,0:21:63.20:0,63,859	0/0:40,0:40:99:0,120,1615	0/0:16,0:16:48.14:0,48,652	1/1:2,19:21:60.12:880,60,0	1/1:0,16:16:45.12:651,45,0	1/1:0,28:28:81.27:1212,81,0	0/0:21,0:21:57.19:0,57,797	0/0:17,0:17:45.15:0,45,629	0/0:22,0:22:66.22:0,66,921	0/0:17,0:17:51.12:0,51,648	0/0:26,0:26:78.26:0,78,1090	1/1:4,20:24:60.18:876,60,0	0/0:15,0:15:45.12:0,45,608
chr10	103320305	.	TGA	T	6479.81	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.074;DP=746;FS=0.335;HRun=0;HaplotypeScore=89.4241;InbreedingCoeff=0.9976;MQ=86.77;MQ0=1;MQRankSum=-1.582;QD=42.91;ReadPosRankSum=0.371;VQSLOD=6.2070;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,172,3250	0/0:6,0:6:18.06:0,18,347	0/0:27,0:27:65.85:0,66,1179	0/0:24,0:24:57.16:0,57,1026	0/0:27,0:27:78.25:0,78,1464	0/0:20,0:20:57.20:0,57,1100	0/0:36,0:36:99:0,105,1975	1/1:0,32:32:96.31:1445,96,0	0/0:24,0:24:72.25:0,72,1374	0/0:28,0:28:84.29:0,84,1605	0/0:8,0:8:24.08:0,24,456	0/0:34,0:34:93.31:0,93,1756	0/0:21,0:21:63.20:0,63,1147	0/0:28,0:28:81.28:0,81,1553	0/0:34,0:34:99:0,102,1970	0/0:23,0:23:69.24:0,69,1333	0/0:34,0:34:99:0,102,1937	0/0:32,0:32:96.33:0,96,1814	1/1:0,23:23:69.20:994,69,0	1/1:0,20:20:60.20:917,60,0	1/1:0,63:63:99:2573,169,0	0/0:32,0:32:96.32:0,96,1810	0/0:21,0:21:63.22:0,63,1217	0/0:28,0:28:84.29:0,84,1623	0/0:13,0:13:39.13:0,39,754	0/0:24,0:24:72.25:0,72,1387	1/1:0,13:12:36.12:551,36,0	0/0:13,0:13:39.13:0,39,753
chr10	103323533	.	TGTG	T	4798.03	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.909;DP=751;FS=0.387;HRun=0;HaplotypeScore=108.4979;InbreedingCoeff=0.9990;MQ=72.92;MQ0=0;MQRankSum=-7.126;QD=37.78;ReadPosRankSum=-1.394;VQSLOD=5.2501;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,157,3440	0/0:14,0:14:42.14:0,42,938	0/0:29,0:29:82.80:0,83,1629	0/0:23,0:23:50.67:0,51,979	0/0:26,0:26:75.26:0,75,1634	0/0:26,0:26:75.26:0,75,1675	0/0:28,0:28:81.75:0,82,1810	1/1:4,30:34:90.29:1436,90,0	0/0:29,0:29:84.29:0,84,1815	0/0:30,0:30:81.26:0,81,1653	0/0:26,0:26:75.24:0,75,1607	0/0:34,0:34:99:0,102,2262	0/0:17,0:17:45.15:0,45,973	0/0:26,0:26:63.22:0,63,1382	0/0:34,0:34:99:0,99,2212	0/0:36,0:36:99:0,105,2292	0/0:30,0:30:81.28:0,81,1809	0/0:41,0:41:99:0,120,2613	1/1:3,12:15:33.11:535,33,0	1/1:2,27:29:72.11:1103,72,0	1/1:0,28:28:63.17:999,63,0	0/0:26,0:26:78.27:0,78,1690	0/0:22,0:22:63.22:0,63,1405	0/0:29,0:29:87.25:0,87,1837	0/0:19,0:19:48.16:0,48,1055	0/0:19,0:19:54.19:0,54,1175	1/1:0,21:21:48.08:725,48,0	0/0:7,0:7:21.07:0,21,469
chr10	103325711	.	AC	A	693.03	PASS	AB=0.653;AC=8;AF=0.143;AN=56;BaseQRankSum=6.986;DP=495;FS=11.541;HRun=2;HaplotypeScore=61.5121;InbreedingCoeff=0.7678;MQ=68.67;MQ0=0;MQRankSum=-6.752;QD=19.25;ReadPosRankSum=-2.795;VQSLOD=1.8965;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.19:0,57,833	0/0:6,0:6:18.06:0,18,266	0/0:19,0:15:12.64:0,13,288	0/0:11,0:8:14.96:0,15,177	0/0:18,0:18:54.18:0,54,798	0/0:25,0:24:69.22:0,69,993	0/0:14,0:14:36.12:0,36,532	1/1:0,11:11:27.08:335,27,0	0/0:17,0:17:42.13:0,42,589	0/0:22,0:22:63.20:0,63,898	0/0:20,0:20:60.17:0,60,847	0/0:21,0:21:60.16:0,60,854	0/0:14,0:14:36.10:0,36,511	0/0:25,0:25:69.15:0,69,992	0/0:22,0:22:63.21:0,63,932	0/0:23,0:23:66.04:0,66,938	0/0:29,0:29:87.21:0,87,1242	0/0:26,0:26:72.19:0,72,1037	0/1:1,4:4:0.79:105,0,1	1/1:3,8:10:12.41:256,12,0	1/1:1,2:3:2.85:20,3,0	0/0:21,0:21:60.14:0,60,805	0/0:15,0:15:38.97:0,39,512	0/0:25,0:24:66.22:0,66,974	0/0:24,0:24:72.24:0,72,1065	0/0:28,0:28:84.25:0,84,1187	0/1:4,2:6:2.42:119,0,2	0/0:14,0:14:42.14:0,42,620
chr10	103325723	.	G	GCTGA	2214.42	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.614;DP=500;FS=21.803;HRun=0;HaplotypeScore=87.4739;InbreedingCoeff=0.9393;MQ=73.13;MQ0=0;MQRankSum=-8.204;QD=58.27;ReadPosRankSum=-2.832;VQSLOD=2.1378;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.17:0,57,1047	0/0:7,0:7:21.05:0,21,366	0/0:15,0:14:29.41:0,29,549	0/0:11,0:9:21.07:0,21,392	0/0:20,0:20:57.18:0,57,1015	0/0:23,0:22:54.19:0,54,1025	0/0:11,0:11:30.10:0,30,569	1/1:3,12:15:36.12:947,36,0	0/0:14,0:14:42.14:0,42,778	0/0:23,0:23:69.24:0,69,1301	0/0:22,0:22:66.23:0,66,1253	0/0:20,0:20:54.19:0,54,1021	0/0:15,0:15:36.12:0,36,683	0/0:26,0:26:72.25:0,72,1356	0/0:21,0:21:57.18:0,57,1043	0/0:23,0:23:66.23:0,66,1253	0/0:29,0:29:87.26:0,87,1577	0/0:27,0:27:75.24:0,75,1377	1/1:2,1:3:9.03:209,9,0	1/1:4,7:11:30.05:656,30,0	1/1:2,1:3:3.01:80,3,0	0/0:21,0:21:63.22:0,63,1196	0/0:10,0:10:27.09:0,27,512	0/0:31,0:30:87.28:0,87,1586	0/0:29,0:29:78.26:0,78,1448	0/0:27,0:27:75.26:0,75,1409	1/1:0,6:6:18.06:485,18,0	0/0:15,0:15:42.14:0,42,798
chr10	103325883	.	T	TA	3914.42	PASS	AB=0.900;AC=36;AF=0.643;AN=56;BaseQRankSum=-4.064;DP=538;FS=0.448;HRun=13;HaplotypeScore=74.5259;InbreedingCoeff=0.6688;MQ=68.91;MQ0=1;MQRankSum=-1.934;QD=10.25;ReadPosRankSum=-2.618;VQSLOD=2.5034;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,36:46:86.04:794,86,0	1/1:1,5:6:9.01:84,9,0	0/1:9,0:7:8.36:8,0,20	0/0:13,0:12:5.47:0,5,29	0/0:15,0:16:25.82:0,26,170	1/1:10,17:26:47.85:431,48,0	1/1:4,18:22:39.04:362,39,0	1/1:18,0:18:19.76:99,20,0	1/1:2,12:15:12.06:135,12,0	0/1:19,0:19:13.97:14,0,186	0/0:17,0:18:34.65:0,35,232	1/1:7,17:24:9.40:222,9,0	1/1:3,14:18:14.18:161,14,0	1/1:6,15:21:29.86:257,30,0	0/1:20,0:21:4.93:5,0,226	0/0:16,2:19:9.80:0,10,203	0/0:35,0:38:63.28:0,63,423	1/1:8,23:31:24.36:353,24,0	1/1:12,0:12:13.69:62,14,0	1/1:8,0:8:6.84:29,7,0	1/1:14,0:14:16.88:70,17,0	0/0:20,0:21:37.55:0,38,250	1/1:1,13:14:21.91:197,22,0	0/1:9,17:27:2.29:254,0,2	1/1:5,16:21:36.45:323,36,0	0/0:28,0:28:50.41:0,50,349	1/1:9,0:9:11.19:53,11,0	0/0:3,0:3:8.92:0,9,62
chr10	103325890	.	A	AAAAAAC	3860.03	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-5.868;DP=575;FS=19.875;HRun=0;HaplotypeScore=136.1548;InbreedingCoeff=0.8660;MQ=68.74;MQ0=1;MQRankSum=-4.158;QD=38.99;ReadPosRankSum=-3.142;VQSLOD=1.7151;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:81.85:0,82,838	0/0:7,0:7:14.97:0,15,125	0/1:9,0:7:7.77:8,0,142	0/0:11,0:10:9.78:0,10,41	0/0:15,0:15:39.03:0,39,631	0/0:27,0:27:16.83:0,17,515	0/0:21,0:21:42.05:0,42,386	1/1:6,11:25:43.18:1172,43,0	0/0:20,0:20:32.43:0,32,295	0/0:21,0:21:49.51:0,50,795	0/0:20,0:20:57.12:0,57,909	0/0:22,0:22:39.48:0,39,381	0/0:19,0:19:32.98:0,33,307	0/0:19,0:19:39.44:0,39,354	0/0:20,0:20:55.71:0,56,958	0/0:20,0:20:45.12:0,45,792	0/0:40,0:40:99:0,99,1602	0/0:34,0:34:60.86:0,61,564	1/1:3,15:21:54.03:1276,54,0	1/1:1,4:6:14.72:318,15,0	1/1:3,16:21:24.07:687,24,0	0/0:21,0:21:54.09:0,54,863	0/0:14,0:14:22.27:0,22,196	0/0:25,0:25:44.55:0,45,462	0/0:20,0:20:41.15:0,41,343	0/0:30,0:30:84.14:0,84,1304	1/1:2,10:17:15.03:399,15,0	0/0:3,0:3:9.03:0,9,185
chr10	103326981	.	GA	G	8283.54	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=12.231;DP=647;FS=4.097;HRun=2;HaplotypeScore=65.6209;InbreedingCoeff=0.9994;MQ=79.02;MQ0=0;MQRankSum=-1.101;QD=33.95;ReadPosRankSum=3.020;VQSLOD=5.3283;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:40:99:1285,99,0	1/1:0,8:8:21.07:273,21,0	0/0:17,0:17:47.32:0,47,683	0/0:22,0:22:60.08:0,60,781	0/0:37,0:37:99:0,108,1610	1/1:0,15:15:33.11:428,33,0	1/1:0,25:25:57.19:740,57,0	0/0:30,0:30:90.26:0,90,1290	1/1:0,24:24:66.21:857,66,0	0/0:18,0:18:54.18:0,54,793	0/0:18,0:18:54.14:0,54,783	1/1:1,15:16:48.15:618,48,0	1/1:0,14:14:39.13:506,39,0	1/1:0,14:14:42.14:543,42,0	0/0:24,0:24:72.21:0,72,1052	0/0:27,0:27:81.27:0,81,1212	0/0:34,0:34:99:0,99,1461	1/1:0,27:27:75.24:971,75,0	0/0:27,0:27:75.22:0,75,1080	0/0:22,0:22:66.14:0,66,939	0/0:44,0:44:99:0,129,1883	0/0:17,0:17:51.12:0,51,737	1/1:0,18:18:42.14:545,42,0	1/1:0,25:25:75.24:973,75,0	1/1:0,18:18:42.14:545,42,0	0/0:23,0:23:69.23:0,69,1034	0/0:31,0:31:93.32:0,93,1392	0/0:12,0:12:36.11:0,36,516
chr10	103327068	.	GA	G	2632.66	PASS	AB=0.647;AC=23;AF=0.411;AN=56;BaseQRankSum=8.183;DP=470;FS=0.838;HRun=12;HaplotypeScore=58.1896;InbreedingCoeff=0.9148;MQ=68.56;MQ0=1;MQRankSum=1.404;QD=14.96;ReadPosRankSum=3.225;VQSLOD=4.4834;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,17:25:26.30:384,26,0	1/1:5,5:10:20.89:159,21,0	0/0:11,0:11:2.98:0,3,31	0/0:11,0:8:13.51:0,14,122	0/0:17,2:20:21.65:0,22,373	1/1:5,12:17:35.86:279,36,0	1/1:7,14:21:11.34:271,11,0	0/0:19,0:20:38.91:0,39,379	1/1:3,11:14:32.86:255,33,0	0/0:13,0:15:38.87:0,39,365	0/0:13,2:15:15.82:0,16,332	1/1:3,4:7:11.92:93,12,0	1/1:3,11:14:32.87:255,33,0	1/1:1,6:7:17.93:139,18,0	0/0:19,0:19:48.10:0,48,487	0/0:12,0:15:35.90:0,36,349	0/0:29,0:31:78.71:0,79,762	1/1:5,15:20:44.81:348,45,0	0/0:22,1:25:36.34:0,36,490	0/0:19,0:19:35.89:0,36,339	0/0:22,0:22:45.08:0,45,452	0/0:13,0:14:26.88:0,27,253	0/1:5,6:11:1.52:160,0,2	1/1:7,11:18:32.85:255,33,0	1/1:2,10:12:32.86:253,33,0	0/0:26,0:26:54.10:0,54,540	0/0:22,0:21:45.58:0,46,453	0/0:8,0:8:21:0,21,202
chr10	103327154	.	G	GAAA	688.03	PASS	AB=0.889;AC=6;AF=0.107;AN=56;BaseQRankSum=6.806;DP=529;FS=0.680;HRun=0;HaplotypeScore=111.5582;InbreedingCoeff=0.2411;MQ=66.53;MQ0=23;MQRankSum=-4.455;QD=11.10;ReadPosRankSum=-3.477;VQSLOD=2.6684;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:32.18:0,32,561	0/0:5,0:5:14.98:0,15,198	0/0:70,0:18:29.31:0,29,403	0/0:66,0:20:7.83:0,8,218	0/0:18,0:18:39.12:0,39,649	0/0:13,0:12:30.09:0,30,452	0/0:23,0:23:66.18:0,66,950	0/1:17,1:20:54.19:171,0,54	0/0:15,0:15:41.60:0,42,508	0/0:16,0:16:39.10:0,39,621	0/0:15,0:14:39.11:0,39,623	0/0:10,0:10:26.98:0,27,330	0/0:12,0:12:32.13:0,32,416	0/0:6,0:6:14.90:0,15,183	0/0:13,0:13:36.07:0,36,572	0/0:15,0:15:42.13:0,42,710	0/0:36,0:36:99:0,105,1755	0/0:24,0:24:72.13:0,72,1027	0/1:9,0:10:53.85:153,0,54	0/1:6,0:6:29.79:86,0,30	0/1:5,2:7:12.70:38,0,13	0/0:14,0:14:19.38:0,19,598	0/0:12,0:12:36.08:0,36,485	0/0:16,0:17:48.99:0,49,710	0/0:17,0:16:41.51:0,42,535	0/0:19,0:19:54.16:0,54,837	1/1:15,3:19:14.34:368,14,0	0/0:9,0:9:24.08:0,24,421
chr10	103327155	.	G	GA	2429.11	PASS	AB=0.876;AC=31;AF=0.554;AN=56;BaseQRankSum=0.053;DP=547;FS=3.261;HRun=14;HaplotypeScore=95.5977;InbreedingCoeff=0.3042;MQ=66.60;MQ0=22;MQRankSum=-2.765;QD=6.98;ReadPosRankSum=-2.931;VQSLOD=2.3164;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,3:21:12.51:216,13,0	1/1:0,4:5:14.84:120,15,0	0/0:72,0:19:16.60:0,17,106	0/1:63,0:20:23.24:23,0,31	0/0:18,0:19:5.85:0,6,134	0/1:6,4:11:52.41:89,0,52	0/1:18,5:23:39.10:161,0,39	1/1:23,0:24:39.68:220,40,0	1/1:11,4:15:30.14:235,30,0	0/0:14,0:14:20.55:0,21,131	0/0:14,0:14:25.07:0,25,157	0/1:8,1:10:1.98:115,0,2	1/1:9,4:13:12.75:182,13,0	1/1:5,1:6:11.98:100,12,0	0/0:12,0:14:8.01:0,8,127	0/1:13,1:15:16.09:16,0,135	0/0:29,0:36:60.88:0,61,368	0/1:17,4:24:12.73:241,0,13	1/1:11,0:13:28.72:166,29,0	1/1:6,0:8:14.36:76,14,0	1/1:7,0:8:5.80:33,6,0	0/1:14,1:17:18.99:19,0,111	1/1:9,4:13:3.75:170,4,0	0/1:14,3:17:53.63:136,0,54	0/1:15,3:17:17.22:96,0,17	0/0:18,0:19:30.93:0,31,183	1/1:18,0:22:39.34:209,39,0	0/0:10,0:10:20.39:0,20,126
chr10	103327173	.	GA	G	1035.89	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=2.657;DP=510;FS=0.000;HRun=9;HaplotypeScore=79.4812;InbreedingCoeff=0.9117;MQ=71.49;MQ0=14;MQRankSum=-4.161;QD=15.23;ReadPosRankSum=-0.365;VQSLOD=3.6649;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:48.09:0,48,539	0/0:8,0:8:15.03:0,15,163	0/0:52,1:22:12.03:0,12,300	0/0:44,1:17:26.47:0,26,324	0/0:23,0:23:57.16:0,57,649	0/0:14,0:14:30.03:0,30,319	0/0:17,0:17:11.54:0,12,342	1/1:8,15:23:41.61:383,42,0	0/0:13,0:13:20.68:0,21,187	0/0:16,0:16:42.11:0,42,469	0/0:18,0:18:48.13:0,48,546	0/0:13,0:13:24.53:0,25,267	0/0:11,0:11:23.98:0,24,250	0/0:6,0:6:18.04:0,18,197	0/0:12,0:12:27.04:0,27,284	0/0:15,0:15:39.10:0,39,441	0/0:36,0:36:99:0,99,1112	0/0:22,0:22:57.02:0,57,586	1/1:2,12:14:36.01:329,36,0	1/1:1,5:6:6.60:102,7,0	1/1:0,4:4:2.99:27,3,0	0/0:17,0:17:42.12:0,42,485	0/0:17,0:17:42.60:0,43,486	0/0:18,0:18:45.08:0,45,481	0/0:15,0:14:29.91:0,30,317	0/0:20,0:20:48.14:0,48,554	1/1:6,15:21:38.86:356,39,0	0/0:12,0:12:36.07:0,36,388
chr10	103327228	.	C	CT	2426.49	PASS	AB=0.682;AC=27;AF=0.482;AN=56;BaseQRankSum=-5.714;DP=439;FS=7.775;HRun=13;HaplotypeScore=61.6328;InbreedingCoeff=0.6358;MQ=70.50;MQ0=1;MQRankSum=3.301;QD=9.94;ReadPosRankSum=-0.030;VQSLOD=2.4910;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,19:26:0.55:261,1,0	1/1:2,8:11:15.32:123,15,0	0/0:10,0:8:1.22:0,1,3	0/0:11,0:10:12.89:0,13,79	0/0:17,0:17:26.57:0,27,181	1/1:2,20:23:32.87:293,33,0	0/1:2,8:10:8.57:72,0,9	1/1:10,23:34:27.84:517,28,0	1/1:1,9:10:12.01:111,12,0	0/0:12,0:12:16.82:0,17,118	0/0:12,0:13:15.89:0,16,94	1/1:4,11:15:0.44:147,0,0	1/1:4,7:11:7.68:81,8,0	1/1:3,6:10:8.85:70,9,0	0/0:11,1:14:3.95:0,4,163	0/0:17,1:18:7.74:0,8,197	0/1:25,3:29:16.98:17,0,309	1/1:5,8:15:38.61:315,39,0	0/0:20,0:22:48.63:0,49,317	0/0:9,0:9:16.26:0,16,103	1/1:4,4:8:6.73:44,7,0	0/0:12,0:13:25.67:0,26,166	1/1:10,4:14:18:160,18,0	1/1:6,7:13:35.99:315,36,0	0/1:4,10:14:5.57:96,0,6	0/0:21,0:21:34.11:0,34,225	0/0:19,0:20:48.86:0,49,314	0/0:12,0:12:10.89:0,11,201
chr10	103328563	.	TA	T	5711.22	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=8.461;DP=424;FS=0.831;HRun=8;HaplotypeScore=52.0918;InbreedingCoeff=0.9433;MQ=74.58;MQ0=1;MQRankSum=0.731;QD=23.70;ReadPosRankSum=2.075;VQSLOD=5.4459;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,32:36:81.13:782,81,0	1/1:0,6:6:15.02:145,15,0	0/0:17,0:11:24.94:0,25,218	0/0:13,1:13:3:0,3,116	0/0:21,0:22:60.05:0,60,703	1/1:0,26:26:57.09:550,57,0	1/1:0,5:5:15.02:145,15,0	1/1:2,20:22:57.06:544,57,0	1/1:0,8:8:21.03:203,21,0	0/0:20,0:20:57.17:0,57,688	0/0:10,0:10:24.07:0,24,290	1/1:0,6:6:18.03:174,18,0	1/1:0,11:11:24:232,24,0	1/1:1,12:13:27.01:261,27,0	0/0:10,0:10:30.09:0,30,362	0/0:16,0:16:39.11:0,39,460	0/0:31,0:31:84.26:0,84,1009	1/1:1,19:20:57.09:550,57,0	1/1:4,15:18:45.01:419,45,0	1/1:0,13:13:39.06:375,39,0	1/1:3,0:3:6.01:58,6,0	0/0:9,0:9:27.08:0,27,324	1/1:0,9:9:21.03:202,21,0	1/1:0,3:3:9.01:87,9,0	1/1:2,21:23:57.09:550,57,0	0/0:25,0:25:69.12:0,69,800	1/1:3,15:18:45.07:434,45,0	0/0:8,0:8:24.07:0,24,290
chr10	103329397	.	T	TC	714.22	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=5.181;DP=280;FS=24.265;HRun=0;HaplotypeScore=26.7456;InbreedingCoeff=0.8043;MQ=49.13;MQ0=6;MQRankSum=-3.836;QD=26.45;ReadPosRankSum=0.074;VQSLOD=1.9608;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:75.25:0,75,1048	0/0:4,0:4:12.04:0,12,168	0/0:13,0:3:9.03:0,9,124	0/0:18,0:4:12.04:0,12,156	0/0:5,0:5:15.05:0,15,207	0/0:13,0:13:39.13:0,39,544	0/0:11,0:11:30.10:0,30,419	1/1:1,5:5:12.04:192,12,0	0/0:12,0:12:36.12:0,36,499	0/0:8,0:8:21.07:0,21,294	0/0:4,0:4:12.04:0,12,168	0/0:12,0:12:36.12:0,36,503	0/0:5,0:5:15.05:0,15,210	0/0:7,0:7:18.06:0,18,252	0/0:7,1:8:18.06:0,18,251	0/0:2,0:2:3.01:0,3,42	0/0:29,2:30:75.25:0,75,1047	0/0:20,0:20:42.14:0,42,587	1/1:0,7:6:9.03:144,9,0	1/1:0,6:5:12.04:191,12,0	./.	0/0:5,0:5:12.04:0,12,168	0/0:11,0:11:30.10:0,30,419	0/0:17,0:17:42.14:0,42,587	0/0:1,0:1:3.01:0,3,42	0/0:8,0:8:24.06:0,24,318	1/1:1,7:8:21.07:334,21,0	0/0:3,0:3:9.03:0,9,123
chr10	103332229	.	C	CT	6566.48	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=2.423;DP=705;FS=17.922;HRun=3;HaplotypeScore=71.9967;InbreedingCoeff=0.9992;MQ=72.60;MQ0=0;MQRankSum=0.270;QD=40.29;ReadPosRankSum=-2.587;VQSLOD=2.3309;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.27:0,93,1187	0/0:13,0:12:36.12:0,36,467	0/0:8,0:8:23.90:0,24,266	0/0:13,0:13:39.12:0,39,483	0/0:33,0:33:90.29:0,90,1168	0/0:23,0:23:63.20:0,63,817	0/0:39,0:39:99:0,117,1504	1/1:4,32:36:96.30:1399,96,0	0/0:16,0:16:48.16:0,48,623	0/0:30,0:30:84.27:0,84,1078	0/0:15,0:15:42.12:0,42,530	0/0:21,0:21:57.19:0,57,740	0/0:22,0:22:66.19:0,66,827	0/0:23,0:23:69.21:0,69,878	0/0:41,0:41:99:0,123,1597	0/0:28,0:28:84.27:0,84,1091	0/0:42,0:42:99:0,126,1633	0/0:25,0:25:75.24:0,75,972	1/1:2,21:23:69.20:1002,69,0	1/1:1,27:28:72.15:999,72,0	1/1:2,42:44:99:1799,120,0	0/0:27,0:27:72.23:0,72,932	0/0:21,0:21:63.20:0,63,803	0/0:30,0:30:90.29:0,90,1169	0/0:16,0:16:48.16:0,48,623	0/0:16,0:16:48.16:0,48,623	1/1:2,29:31:93.28:1367,93,0	0/0:9,0:9:27.09:0,27,351
chr10	103332581	.	A	AGAACAACAACAAC	6004.58	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=3.152;DP=522;FS=0.000;HRun=0;HaplotypeScore=180.4271;InbreedingCoeff=0.9494;MQ=50.38;MQ0=37;MQRankSum=-7.221;QD=68.23;ReadPosRankSum=5.933;VQSLOD=4.0387;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:95.87:0,96,1855	0/0:7,0:6:18.05:0,18,311	0/0:39,0:8:10.54:0,11,125	0/0:29,0:4:6.02:0,6,196	0/0:25,0:25:66.75:0,67,1031	0/0:23,0:18:45.11:0,45,834	0/0:18,0:12:19.75:0,20,361	1/1:18,0:16:35.84:1178,36,0	0/0:17,0:17:42.12:0,42,1071	0/0:19,0:19:53.52:0,54,1221	0/0:9,0:9:18:0,18,370	0/0:16,0:16:45.12:0,45,996	0/0:16,0:16:27:0,27,515	0/0:14,0:14:33.07:0,33,607	0/0:20,0:19:45.03:0,45,812	0/0:13,0:11:27.08:0,27,589	0/0:19,0:18:36.06:0,36,564	0/0:20,0:20:43.61:0,44,950	1/1:10,0:6:18.06:474,18,0	1/1:2,13:28:44.37:2350,44,0	1/1:7,0:5:11.67:185,12,0	0/0:7,0:7:18.03:0,18,309	0/0:13,0:13:33.48:0,33,496	0/0:22,0:22:38.37:0,38,859	0/0:13,0:12:33.08:0,33,574	0/0:16,0:14:39.07:0,39,834	1/1:3,8:22:36.12:1816,36,0	0/0:15,0:13:33.10:0,33,755
chr10	103334030	.	GGAGAGAGA	G	1179.38	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=5.624;DP=361;FS=4.796;HRun=0;HaplotypeScore=112.8831;InbreedingCoeff=0.5304;MQ=45.81;MQ0=18;MQRankSum=-5.184;QD=9.91;ReadPosRankSum=-0.499;VQSLOD=2.1858;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:15.02:0,15,379	0/0:4,0:4:3.01:0,3,85	0/0:15,0:7:2.92:0,3,17	./.	0/0:10,0:12:10.92:0,11,243	0/1:9,0:9:5.32:5,0,172	0/1:18,0:17:1.29:1,0,224	1/1:17,0:13:12.03:227,12,0	0/0:6,0:6:6.02:0,6,178	0/1:14,0:13:18.62:19,0,461	0/0:12,0:13:12.17:0,12,335	0/0:11,0:12:7.28:0,7,346	0/0:10,0:9:18.06:0,18,492	0/0:13,0:13:12.02:0,12,244	0/0:13,0:13:24.55:0,25,804	0/0:6,0:8:12.41:0,12,349	0/0:22,0:23:36.12:0,36,1217	0/0:14,0:14:23.99:0,24,576	1/1:6,5:9:17.75:226,18,0	1/1:4,6:10:11.59:207,12,0	1/1:19,0:19:2.61:49,3,0	0/0:7,0:7:12.04:0,12,338	0/0:7,0:7:4.89:0,5,64	0/0:15,0:16:8.83:0,9,107	0/0:11,0:11:12.44:0,12,245	0/0:8,0:8:18.06:0,18,565	1/1:8,12:20:28.19:604,28,0	0/0:2,0:2:6.02:0,6,158
chr10	103334053	.	G	GAGAGAC	2008.69	PASS	AB=0.858;AC=26;AF=0.481;AN=54;BaseQRankSum=0.067;DP=376;FS=5.445;HRun=0;HaplotypeScore=122.1976;InbreedingCoeff=0.2184;MQ=35.55;MQ0=22;MQRankSum=-2.546;QD=8.58;ReadPosRankSum=-0.408;VQSLOD=1.5388;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,3:29:0.63:370,1,0	0/1:4,2:6:12.15:93,0,12	0/0:18,0:3:3:0,3,26	0/1:30,0:3:0.86:1,0,15	0/0:13,0:12:2.27:0,2,106	0/1:7,0:10:21.07:108,0,21	0/1:14,5:18:2.78:94,0,3	0/1:13,0:9:5.99:18,0,6	1/1:2,4:6:3.01:99,3,0	0/0:15,0:14:27.61:0,28,310	0/0:15,0:15:8.52:0,9,158	0/1:2,9:11:8.74:285,0,9	1/1:7,1:7:9.89:152,10,0	1/1:5,8:15:13.88:238,14,0	0/0:15,0:15:17.45:0,17,321	0/0:9,0:9:18.79:0,19,218	0/0:16,0:16:33:0,33,514	1/1:2,10:15:17.55:463,18,0	0/1:11,0:9:19.99:81,0,20	1/1:10,0:11:1.54:5,2,0	0/0:15,0:14:0.53:0,1,2	0/0:14,0:14:9.53:0,10,107	1/1:2,3:7:2.72:83,3,0	1/1:7,7:14:2.82:44,3,0	1/1:8,1:8:1.23:3,1,0	0/0:9,0:9:10.99:0,11,184	0/1:19,0:20:30.50:30,0,65	./.
chr10	103334065	.	CAG	C	368.93	PASS	AB=0.861;AC=15;AF=0.278;AN=54;BaseQRankSum=5.148;DP=325;FS=4.728;HRun=0;HaplotypeScore=86.9746;InbreedingCoeff=-0.4220;MQ=39.77;MQ0=12;MQRankSum=-4.529;QD=1.97;ReadPosRankSum=-4.301;VQSLOD=-0.2792;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,2:23:29.24:29,0,88	0/1:3,2:5:22.51:64,0,23	0/0:19,0:4:3.01:0,3,51	0/0:26,0:4:2.28:0,2,58	0/0:11,0:11:4.36:0,4,99	0/1:5,5:10:46.81:97,0,47	0/1:9,6:15:19.86:41,0,20	0/0:8,0:7:0.58:0,1,51	0/0:5,0:5:2.97:0,3,20	0/1:13,1:13:18.93:19,0,423	0/1:13,0:13:40.38:40,0,88	0/1:10,2:12:7.56:8,0,109	0/0:7,0:6:9:0,9,104	0/1:12,3:15:21.32:21,0,113	0/1:11,1:12:19.68:20,0,276	0/1:6,3:9:63.23:63,0,180	0/0:12,0:12:33.07:0,33,504	0/0:14,1:15:21.06:0,21,275	0/0:11,0:10:14.94:0,15,240	0/1:10,1:11:11.42:11,0,77	0/1:14,0:14:0.01:1,0,0	0/1:11,1:12:20.45:20,0,137	0/0:5,1:6:4.83:0,5,46	0/0:10,0:10:2.01:0,2,21	0/0:5,1:6:2.32:0,2,12	0/1:7,1:8:20.75:21,0,189	0/1:12,2:14:50.88:51,0,133	./.
chr10	103334651	.	C	CT	8205.88	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-13.598;DP=591;FS=37.232;HRun=5;HaplotypeScore=61.1312;InbreedingCoeff=0.9691;MQ=76.99;MQ0=1;MQRankSum=-1.014;QD=33.09;ReadPosRankSum=3.429;VQSLOD=2.4787;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,43:45:99:1537,117,0	1/1:0,12:12:36.12:474,36,0	0/0:37,0:29:31.37:0,31,462	0/0:25,0:17:20.20:0,20,236	0/0:16,0:16:45.11:0,45,483	1/1:1,21:22:60.20:790,60,0	1/1:2,22:23:57.19:750,57,0	0/0:25,0:25:63.13:0,63,667	1/1:3,16:19:45.15:592,45,0	0/0:22,0:22:57.13:0,57,607	0/0:17,0:17:42.10:0,42,450	1/1:3,12:15:29.96:395,30,0	1/1:2,16:18:36.12:474,36,0	1/1:2,14:16:39.13:508,39,0	0/0:20,0:20:54.12:0,54,572	0/0:14,1:15:2.63:0,3,379	0/0:24,0:23:60.15:0,60,644	1/1:1,31:32:90.29:1182,90,0	0/0:31,0:31:93.23:0,93,993	0/0:18,0:18:45.11:0,45,484	0/0:25,0:25:69.17:0,69,742	0/0:15,0:15:45.11:0,45,483	1/1:3,9:12:33.06:400,33,0	1/1:1,18:19:48.16:632,48,0	1/1:0,14:14:36.12:474,36,0	0/0:23,0:23:63.16:0,63,677	0/0:26,0:26:62.89:0,63,656	0/0:4,0:4:11.99:0,12,109
chr10	103336002	.	C	CAATAATAAT	1076.43	PASS	AB=1.000;AC=20;AF=0.500;AN=40;BaseQRankSum=0.400;DP=195;FS=0.000;HRun=0;HaplotypeScore=57.0816;InbreedingCoeff=0.6646;MQ=64.46;MQ0=2;MQRankSum=-3.310;QD=16.31;ReadPosRankSum=-0.872;VQSLOD=1.5463;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:9.92:280,10,0	0/1:5,0:5:0:0,0,0	./.	./.	0/0:4,0:4:3:0,3,25	1/1:2,0:5:8.96:132,9,0	./.	0/0:19,0:18:8.91:0,9,101	1/1:6,0:6:5.90:38,6,0	0/0:10,0:10:6.01:0,6,108	./.	1/1:4,0:4:2.97:20,3,0	1/1:6,0:6:6.02:112,6,0	1/1:4,0:4:5.98:120,6,0	0/0:8,0:8:9.03:0,9,244	0/0:9,0:9:12.04:0,12,326	0/0:21,0:21:45.15:0,45,1090	1/1:10,0:9:14.91:243,15,0	0/0:10,0:10:9.03:0,9,188	./.	0/1:3,0:3:0:0,0,0	./.	./.	1/1:1,0:1:2.04:6,2,0	1/1:1,2:7:6.02:270,6,0	0/0:11,0:11:15.05:0,15,341	0/0:16,0:16:30.05:0,30,546	./.
chr10	103336026	.	TA	T	1886.06	PASS	AB=1.000;AC=11;AF=0.220;AN=50;BaseQRankSum=2.767;DP=182;FS=0.628;HRun=2;HaplotypeScore=28.6803;InbreedingCoeff=0.6749;MQ=60.66;MQ0=3;MQRankSum=-0.369;QD=30.92;ReadPosRankSum=-1.684;VQSLOD=2.6828;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39.11:0,39,513	0/0:4,0:4:12.01:0,12,144	./.	0/1:4,0:3:5.03:5,0,23	0/0:4,0:3:9.03:0,9,126	0/0:5,0:5:9.02:0,9,116	./.	1/1:0,28:27:81.24:1030,81,0	0/0:4,0:4:12.04:0,12,175	0/0:4,0:4:12.04:0,12,172	0/0:2,0:2:6.02:0,6,86	0/0:2,0:2:6.02:0,6,86	0/0:4,0:4:12.03:0,12,152	0/0:7,0:7:21.06:0,21,276	0/0:3,0:3:9.03:0,9,135	0/0:6,0:6:18.06:0,18,261	0/0:27,0:27:81.27:0,81,1185	0/0:12,0:11:33.03:0,33,424	1/1:0,10:10:30.10:387,30,0	1/1:0,3:3:6.02:74,6,0	1/1:0,1:1:3.01:39,3,0	./.	0/0:2,0:2:6.02:0,6,85	0/0:1,0:1:3.01:0,3,45	0/0:8,0:8:11.98:0,12,114	0/0:7,0:7:21.07:0,21,311	1/1:0,15:15:39.13:506,39,0	0/0:4,0:4:12.04:0,12,163
chr10	103336224	.	TA	T	7353.52	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=12.912;DP=463;FS=1.295;HRun=8;HaplotypeScore=48.8972;InbreedingCoeff=0.9912;MQ=61.17;MQ0=1;MQRankSum=-0.180;QD=24.27;ReadPosRankSum=0.124;VQSLOD=5.3263;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:90.14:869,90,0	1/1:0,8:8:24.04:232,24,0	0/0:10,0:8:23.86:0,24,252	0/0:13,0:11:21.54:0,22,255	0/0:11,0:11:30.09:0,30,362	1/1:0,8:8:21.03:203,21,0	1/1:6,14:19:32.84:303,33,0	1/1:5,37:42:99:1057,111,0	1/1:2,8:10:21.02:197,21,0	0/0:15,0:15:39.12:0,39,471	0/0:8,0:8:24.07:0,24,290	1/1:1,9:10:21.03:203,21,0	1/1:0,13:13:39.06:377,39,0	1/1:2,14:16:42.07:405,42,0	0/0:14,0:14:33.09:0,33,387	0/0:14,0:14:42.13:0,42,507	0/0:30,0:30:87.27:0,87,1051	1/1:3,30:33:87.14:840,87,0	1/1:2,15:17:42.07:405,42,0	1/1:2,15:17:45.06:428,45,0	1/1:0,18:18:51.08:492,51,0	0/0:7,0:7:21.06:0,21,254	1/1:0,6:6:18.03:174,18,0	1/1:2,12:14:13.14:270,13,0	1/1:1,8:9:24.04:232,24,0	0/0:21,0:21:54.11:0,54,623	1/1:4,26:30:69.10:666,69,0	0/0:16,0:16:48.15:0,48,580
chr10	103336913	.	C	CCTGT	2598.48	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=3.733;DP=322;FS=17.791;HRun=0;HaplotypeScore=72.2978;InbreedingCoeff=0.6341;MQ=64.74;MQ0=38;MQRankSum=-6.075;QD=15.75;ReadPosRankSum=-0.284;VQSLOD=1.4449;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,13:24:23.88:559,24,0	1/1:4,0:4:9.03:176,9,0	0/0:30,0:11:16.91:0,17,300	0/0:38,0:16:27.82:0,28,301	0/0:5,0:5:12.04:0,12,232	1/1:8,0:7:12.04:273,12,0	1/1:6,7:12:0.47:1,0,0	0/1:12,0:9:25.08:25,0,36	1/1:9,4:9:13.29:270,13,0	0/0:5,0:4:12.04:0,12,231	0/0:6,0:6:9.03:0,9,169	1/1:4,5:10:15.05:411,15,0	1/1:4,4:7:9.03:238,9,0	1/1:5,2:5:4.26:54,4,0	0/0:16,0:14:26.10:0,26,551	0/0:7,0:7:21.03:0,21,358	0/0:12,0:12:33.11:0,33,632	1/1:0,7:9:16.23:433,16,0	0/1:8,0:6:42.09:42,0,49	1/1:4,0:1:3:28,3,0	0/1:7,0:7:3.22:3,0,19	0/0:9,0:8:15.05:0,15,299	0/1:7,0:7:0.23:0,0,0	1/1:8,12:21:7.65:142,8,0	1/1:2,4:6:6.02:137,6,0	0/0:9,0:8:18.06:0,18,350	0/0:10,0:8:14.81:0,15,135	0/0:9,0:5:11.84:0,12,152
chr10	103336914	.	C	CTGT	1139.64	PASS	AB=0.919;AC=22;AF=0.393;AN=56;BaseQRankSum=6.073;DP=322;FS=30.981;HRun=0;HaplotypeScore=73.5196;InbreedingCoeff=0.5738;MQ=62.87;MQ0=42;MQRankSum=-4.815;QD=8.20;ReadPosRankSum=0.708;VQSLOD=0.5705;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,3:21:20.69:249,21,0	1/1:4,0:4:8.95:98,9,0	0/0:29,0:10:16.58:0,17,287	0/0:38,0:16:25.56:0,26,358	0/0:6,0:6:11.79:0,12,222	1/1:8,0:7:12.03:135,12,0	0/1:13,0:11:0.03:0,0,1	0/0:11,0:8:10.09:0,10,103	0/1:12,1:9:8.63:122,0,9	0/0:5,0:4:12.04:0,12,222	0/0:7,0:6:9.03:0,9,168	1/1:7,3:10:15.05:199,15,0	1/1:8,1:6:9.03:114,9,0	1/1:8,0:6:3:31,3,0	0/0:16,0:14:34.05:0,34,592	0/0:8,0:8:21.03:0,21,352	0/0:12,0:12:33.11:0,33,612	1/1:11,0:11:2.99:177,3,0	0/1:7,0:6:10.16:10,0,92	1/1:4,0:1:2.22:7,2,0	0/0:7,0:7:5.99:0,6,53	0/0:9,0:8:15.05:0,15,280	0/0:6,0:6:0.08:0,0,0	0/1:19,1:21:22.53:84,0,23	1/1:6,0:6:6.02:95,6,0	0/0:9,0:8:20.99:0,21,347	0/0:10,0:8:14.53:0,15,141	0/0:10,0:4:11.89:0,12,151
chr10	103337077	.	CTCT	C	3160.19	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.742;DP=502;FS=5.267;HRun=0;HaplotypeScore=76.5213;InbreedingCoeff=0.9669;MQ=83.06;MQ0=0;MQRankSum=-1.974;QD=34.73;ReadPosRankSum=0.021;VQSLOD=3.7161;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,2171	0/0:5,0:5:12.04:0,12,262	0/0:17,0:15:39.03:0,39,631	0/0:20,0:20:48.11:0,48,887	0/0:15,0:15:45.14:0,45,920	0/0:19,0:19:45.13:0,45,903	0/0:21,0:21:60.16:0,60,1265	1/1:3,20:23:60.15:894,60,0	0/0:16,0:16:45.15:0,45,928	0/0:13,0:13:39.10:0,39,770	0/0:19,0:19:51.16:0,51,1073	0/0:14,0:14:42.14:0,42,891	0/0:17,0:17:51.16:0,51,1072	0/0:17,0:16:45.14:0,45,918	0/0:22,0:22:66.21:0,66,1353	0/0:15,0:15:42.14:0,42,917	0/0:36,0:36:99:0,105,2246	0/0:25,0:25:72.25:0,72,1561	1/1:3,13:16:39.06:564,39,0	1/1:1,5:6:6.02:95,6,0	1/1:0,32:32:75.16:1187,75,0	0/0:11,0:11:33.11:0,33,692	0/0:12,0:12:30.10:0,30,632	0/0:28,0:28:66.21:0,66,1386	0/0:7,0:7:21.07:0,21,432	0/0:13,0:13:39.13:0,39,781	1/1:1,13:14:39.09:590,39,0	0/0:12,0:12:33.11:0,33,699
chr10	103337239	.	T	TG	13428.36	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-8.579;DP=514;FS=0.000;HRun=0;HaplotypeScore=51.5879;InbreedingCoeff=0.9929;MQ=98.52;MQ0=0;MQRankSum=-4.054;QD=43.60;ReadPosRankSum=1.544;VQSLOD=5.1011;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:90.31:1438,90,0	1/1:0,5:5:15.05:229,15,0	0/0:23,0:22:66.17:0,66,853	0/0:32,0:32:95.12:0,95,1199	0/0:17,0:17:48.12:0,48,643	1/1:1,16:17:36.12:575,36,0	1/1:1,21:21:63.21:1006,63,0	1/1:0,30:30:90.29:1396,90,0	1/1:0,16:16:45.15:719,45,0	0/0:16,0:16:48.15:0,48,656	0/0:16,0:16:48.14:0,48,636	1/1:0,13:13:27.09:432,27,0	1/1:0,18:18:51.17:815,51,0	1/1:1,13:14:39.13:619,39,0	0/0:23,0:23:66.22:0,66,923	0/0:15,0:15:45.15:0,45,629	0/0:34,0:34:99:0,102,1406	1/1:0,27:27:78.27:1246,78,0	1/1:0,19:19:57.18:883,57,0	1/1:0,13:13:36.12:575,36,0	1/1:0,19:19:54.18:862,54,0	0/0:7,0:7:18.06:0,18,252	1/1:1,13:14:33.11:525,33,0	1/1:0,25:25:69.24:1103,69,0	1/1:0,7:7:18.06:287,18,0	0/0:16,0:16:48.15:0,48,642	1/1:0,16:16:45.15:719,45,0	0/0:7,0:7:15.05:0,15,210
chr10	103337340	.	ACT	A	4423.64	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.089;DP=601;FS=0.830;HRun=0;HaplotypeScore=74.4334;InbreedingCoeff=0.9973;MQ=89.58;MQ0=0;MQRankSum=-2.660;QD=38.80;ReadPosRankSum=-1.350;VQSLOD=6.3824;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,2182	0/0:7,0:7:21.07:0,21,391	0/0:24,0:24:63.22:0,63,1147	0/0:23,0:23:54.18:0,54,919	0/0:33,0:33:96.33:0,96,1778	0/0:23,0:23:66.23:0,66,1236	0/0:25,0:25:72.21:0,72,1341	1/1:1,26:27:75.23:1066,75,0	0/0:19,0:19:57.20:0,57,1052	0/0:32,0:32:96.33:0,96,1790	0/0:34,0:34:99:0,99,1835	0/0:17,0:17:51.17:0,51,955	0/0:12,0:12:36.09:0,36,591	0/0:12,0:12:36.12:0,36,662	0/0:21,0:21:60.21:0,60,1113	0/0:17,0:17:51.17:0,51,955	0/0:31,0:31:93.32:0,93,1741	0/0:26,0:26:78.27:0,78,1460	1/1:1,7:8:21.07:309,21,0	1/1:0,14:14:33.11:486,33,0	1/1:1,44:45:99:1767,120,0	0/0:21,0:21:60.21:0,60,1123	0/0:15,0:15:42.14:0,42,785	0/0:20,0:20:57.20:0,57,1068	0/0:12,0:12:27.09:0,27,496	0/0:16,0:16:48.16:0,48,892	1/1:0,20:20:54.18:795,54,0	0/0:8,0:8:24.08:0,24,438
chr10	103337673	.	C	CA	4896.27	PASS	AB=0.661;AC=32;AF=0.571;AN=56;BaseQRankSum=6.776;DP=573;FS=0.390;HRun=11;HaplotypeScore=79.3213;InbreedingCoeff=0.7588;MQ=48.24;MQ0=30;MQRankSum=-7.118;QD=15.85;ReadPosRankSum=-1.627;VQSLOD=4.9420;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,18:23:18.60:375,0,19	1/1:2,6:8:15.03:152,15,0	0/0:14,0:4:3.41:0,3,19	0/0:22,0:5:3.74:0,4,34	0/0:21,1:21:33.22:0,33,269	1/1:8,14:20:30.04:296,30,0	1/1:1,9:9:17.87:166,18,0	1/1:7,15:22:44.92:437,45,0	1/1:4,7:11:12.02:122,12,0	0/0:28,0:28:46.80:0,47,351	0/0:22,0:20:47.77:0,48,369	1/1:7,5:14:23.77:219,24,0	1/1:5,11:16:27.05:274,27,0	1/1:5,11:17:36.75:344,37,0	0/0:27,0:27:68.72:0,69,532	0/0:23,0:22:47.78:0,48,371	0/0:37,3:39:22.80:0,23,539	1/1:8,14:22:0.32:339,0,0	1/1:11,8:18:38.40:356,38,0	1/1:10,12:22:33.06:332,33,0	0/1:6,3:8:42.84:43,0,73	0/0:19,0:20:40.87:0,41,305	1/1:9,15:24:18.67:350,19,0	1/1:3,13:15:9.96:252,10,0	1/1:5,14:20:39.14:341,39,0	0/0:27,0:26:50.86:0,51,410	1/1:9,19:25:33.61:497,34,0	0/0:16,0:11:20.91:0,21,163
chr10	103337695	.	GA	G	1603.85	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=1.804;DP=601;FS=5.340;HRun=9;HaplotypeScore=91.1613;InbreedingCoeff=0.9712;MQ=60.93;MQ0=20;MQRankSum=-4.462;QD=16.37;ReadPosRankSum=-1.844;VQSLOD=3.3742;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:75.16:0,75,831	0/0:9,0:9:18.94:0,19,209	0/0:35,0:13:26.21:0,26,280	0/0:37,0:11:28.59:0,29,283	0/0:19,0:18:48.14:0,48,554	0/0:18,0:17:33.10:0,33,378	0/0:17,0:16:33.08:0,33,369	1/1:5,19:22:51.01:467,51,0	0/0:10,0:10:15.04:0,15,173	0/0:22,1:23:38.73:0,39,692	0/0:25,0:24:60.17:0,60,684	0/0:16,0:16:36.58:0,37,417	0/0:17,0:17:30.08:0,30,340	0/0:19,0:19:48.14:0,48,554	0/0:22,0:22:54.15:0,54,614	0/0:23,0:22:60.16:0,60,682	0/0:37,0:37:93.28:0,93,1073	0/0:24,0:24:55.94:0,56,614	1/1:5,12:17:36:327,36,0	1/1:7,13:20:36:329,36,0	1/1:2,10:12:21.01:192,21,0	0/0:19,0:19:45.13:0,45,518	0/0:22,0:22:50.18:0,50,559	0/0:17,0:17:36.01:0,36,400	0/0:17,1:18:8.68:0,9,353	0/0:28,1:29:53.32:0,53,825	1/1:8,17:23:51.01:464,51,0	0/0:14,1:14:11.65:0,12,387
chr10	103338188	.	A	ATC	9537	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-13.548;DP=578;FS=3.540;HRun=0;HaplotypeScore=62.9377;InbreedingCoeff=0.9652;MQ=60.26;MQ0=10;MQRankSum=1.415;QD=40.24;ReadPosRankSum=4.454;VQSLOD=6.4987;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,35:39:73.80:1311,74,0	1/1:0,7:7:21.07:368,21,0	0/0:19,0:14:33.11:0,33,437	0/0:20,0:14:0.59:0,1,258	0/0:20,0:20:54.16:0,54,712	1/1:2,12:13:27.09:473,27,0	1/1:2,18:19:48.16:841,48,0	0/0:21,0:20:57.15:0,57,737	1/1:1,19:20:51.17:894,51,0	0/0:20,0:20:57.19:0,57,771	0/0:13,0:13:39.13:0,39,528	1/1:1,16:17:45.15:789,45,0	1/1:2,20:22:41.98:727,42,0	1/1:1,13:14:33.11:578,33,0	0/0:15,0:15:39.12:0,39,512	0/0:15,0:14:42.14:0,42,568	0/0:37,0:37:99:0,105,1420	1/1:2,23:25:63.21:1085,63,0	0/0:29,0:25:72.23:0,72,958	0/0:29,0:29:81.27:0,81,1094	0/0:31,0:31:81.27:0,81,1094	0/0:24,0:24:66.22:0,66,890	1/1:3,14:17:45.15:786,45,0	1/1:1,14:14:36.12:631,36,0	1/1:1,23:24:60.21:1052,60,0	0/0:21,0:21:57.18:0,57,756	0/0:18,0:18:48.16:0,48,649	0/0:9,0:9:27.09:0,27,365
chr10	103338329	.	GAA	G	4568.63	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=9.252;DP=507;FS=13.136;HRun=11;HaplotypeScore=81.4302;InbreedingCoeff=0.9835;MQ=62.50;MQ0=3;MQRankSum=-1.015;QD=24.17;ReadPosRankSum=6.912;VQSLOD=2.7673;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:60.13:639,60,0	1/1:0,4:4:12.03:128,12,0	0/0:9,0:6:14.84:0,15,183	0/0:8,0:5:9.03:0,9,123	0/0:25,0:26:62.66:0,63,880	1/1:4,11:14:27.03:287,27,0	1/1:3,16:22:53.34:515,53,0	0/0:18,0:19:47.64:0,48,675	1/1:1,7:8:18.04:192,18,0	0/0:20,0:20:51.16:0,51,761	0/0:18,0:19:40.68:0,41,582	1/1:0,13:13:36.09:383,36,0	1/1:4,12:16:30.06:319,30,0	1/1:1,16:16:39.09:415,39,0	0/0:13,0:14:32.59:0,33,450	0/0:18,0:18:45.08:0,45,619	0/0:54,0:54:99:0,144,2152	1/1:1,15:15:36.09:383,36,0	0/0:19,0:20:56.52:0,57,713	0/0:12,0:14:27.08:0,27,372	0/0:9,0:9:26.98:0,27,338	0/0:16,0:16:42.13:0,42,627	1/1:0,20:20:51.13:543,51,0	1/1:4,13:17:39.09:414,39,0	1/1:1,14:15:33.07:351,33,0	0/0:18,0:18:48.11:0,48,692	0/0:24,0:23:51.14:0,51,751	0/0:28,0:28:71.65:0,72,999
chr10	103338970	.	G	GC	17552.30	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-16.257;DP=684;FS=0.293;HRun=1;HaplotypeScore=62.0574;InbreedingCoeff=0.9588;MQ=86.61;MQ0=0;MQRankSum=-3.809;QD=40.54;ReadPosRankSum=1.680;VQSLOD=5.4361;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:39:99:1663,111,0	1/1:0,6:6:12.04:171,12,0	0/0:25,0:24:69.21:0,69,861	0/0:28,0:28:60.25:0,60,925	0/0:21,0:21:60.19:0,60,776	1/1:0,15:15:36.12:539,36,0	1/1:0,27:27:78.26:1168,78,0	1/1:1,35:36:99:1549,105,0	1/1:0,20:20:57.19:853,57,0	0/0:19,0:19:57.18:0,57,729	0/0:7,0:7:21.06:0,21,260	1/1:1,28:29:84.28:1258,84,0	1/1:0,18:18:45.15:674,45,0	1/1:1,22:23:54.18:809,54,0	0/0:22,0:22:66.20:0,66,843	0/0:29,2:30:0.36:0,0,974	0/0:39,0:39:99:0,114,1464	1/1:0,26:26:72.24:1072,72,0	1/1:3,26:29:84.26:1226,84,0	1/1:1,21:22:60.20:898,60,0	1/1:0,45:47:99:1821,123,0	0/0:14,0:14:42.14:0,42,543	1/1:1,11:12:36.12:533,36,0	1/1:1,37:38:99:1483,99,0	1/1:0,16:16:48.16:719,48,0	0/0:31,0:31:90.29:0,90,1166	1/1:3,27:30:75.25:1116,75,0	0/0:14,0:14:42.14:0,42,545
chr10	103339154	.	C	CG	9820.27	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-15.169;DP=635;FS=14.222;HRun=2;HaplotypeScore=63.8575;InbreedingCoeff=0.9894;MQ=79.74;MQ0=1;MQRankSum=-3.390;QD=34.58;ReadPosRankSum=4.274;VQSLOD=3.8580;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,34:38:72.24:1036,72,0	1/1:3,12:15:26.83:388,27,0	0/0:16,0:16:39.12:0,39,465	0/0:19,0:19:45.12:0,45,529	0/0:11,0:11:33.08:0,33,385	1/1:1,12:13:30.10:432,30,0	1/1:0,24:24:72.23:1019,72,0	0/0:22,0:22:48.09:0,48,566	1/1:0,27:27:72.24:1036,72,0	0/0:25,0:25:66.21:0,66,817	0/0:21,0:21:45.70:0,46,576	1/1:3,25:28:66.22:949,66,0	1/1:2,22:25:63.21:902,63,0	1/1:0,25:25:75.25:1079,75,0	0/0:17,0:17:48.15:0,48,595	0/0:24,0:24:72.21:0,72,879	0/0:36,0:36:99:0,99,1227	1/1:1,29:30:78.26:1123,78,0	0/0:19,0:19:54.17:0,54,669	0/0:23,0:23:60.16:0,60,715	0/0:52,0:52:99:0,150,1843	0/0:12,0:12:35.60:0,36,418	1/1:1,7:8:15.05:216,15,0	1/1:2,30:32:72.24:1036,72,0	1/1:3,16:19:42.14:605,42,0	0/0:22,0:21:63.19:0,63,770	0/0:29,0:29:87.26:0,87,1059	0/0:3,0:3:9.03:0,9,112
chr10	103339967	.	TGGGTG	T	3466.03	PASS	AC=24;AF=0.444;AN=54;BaseQRankSum=6.507;DP=324;FS=14.772;HRun=0;HaplotypeScore=77.3682;InbreedingCoeff=0.8909;MQ=81.94;MQ0=1;MQRankSum=-9.025;QD=24.94;ReadPosRankSum=-0.448;VQSLOD=2.1448;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,10:25:24.08:370,24,0	1/1:2,2:4:3.01:57,3,0	0/0:18,0:12:20.72:0,21,396	0/0:26,0:19:23.24:0,23,433	./.	1/1:1,11:12:21.07:395,21,0	1/1:11,7:18:21.07:400,21,0	0/0:19,0:19:18.06:0,18,488	1/1:2,5:6:9.03:150,9,0	0/0:5,0:5:6.02:0,6,171	0/0:7,0:7:15.04:0,15,373	1/1:5,13:18:33.11:628,33,0	1/1:4,3:7:12.04:228,12,0	1/1:5,7:12:21.07:400,21,0	0/0:6,0:6:15.05:0,15,435	0/0:9,0:9:21.07:0,21,609	0/0:19,0:19:27.09:0,27,718	1/1:2,6:8:18.06:321,18,0	0/0:9,0:9:12.04:0,12,338	0/0:9,0:9:12.04:0,12,345	0/0:29,0:29:57.20:0,57,1583	0/0:6,0:6:15.05:0,15,434	1/1:8,1:9:9.03:141,9,0	1/1:7,9:15:18.02:261,18,0	1/1:1,2:3:6.02:114,6,0	0/0:7,0:7:18.06:0,18,484	0/0:8,0:8:24.08:0,24,695	0/0:4,0:4:9.03:0,9,261
chr10	103340094	.	A	AG	416.96	PASS	AB=0.968;AC=20;AF=0.357;AN=56;BaseQRankSum=7.162;DP=301;FS=26.605;HRun=0;HaplotypeScore=67.6148;InbreedingCoeff=0.3992;MQ=83.99;MQ0=3;MQRankSum=-1.222;QD=2.94;ReadPosRankSum=4.195;VQSLOD=0.9841;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,1:24:42.25:45,0,42	1/1:0,2:2:2.99:23,3,0	0/1:16,0:13:1.91:2,0,245	0/0:19,0:18:11.69:0,12,379	0/0:9,0:10:17.98:0,18,161	0/1:11,0:11:21.69:27,0,22	0/1:19,0:19:28.69:99,0,29	0/0:10,0:10:27.06:0,27,330	0/1:9,2:10:7.41:7,0,11	0/0:6,0:6:16.28:0,16,184	0/0:8,0:8:24.05:0,24,277	1/1:7,0:7:5.79:38,6,0	1/1:4,0:4:5.92:40,6,0	1/1:7,0:7:5.78:32,6,0	0/0:17,0:17:36.05:0,36,415	0/0:9,0:9:21.02:0,21,290	0/0:13,0:12:27.04:0,27,308	0/1:12,0:12:26.90:45,0,27	0/0:10,0:10:27.06:0,27,315	0/0:1,0:1:3.01:0,3,41	0/0:29,0:28:72.01:0,72,837	0/0:2,0:2:6.02:0,6,83	1/1:8,0:8:11.81:92,12,0	1/1:12,1:13:28.69:138,29,0	1/1:6,0:6:1.52:3,2,0	0/0:5,0:7:18:0,18,196	0/0:10,0:10:24.02:0,24,260	0/0:8,0:8:15.03:0,15,171
chr10	103340096	.	G	GA	1604.51	PASS	AB=0.881;AC=24;AF=0.429;AN=56;BaseQRankSum=5.007;DP=310;FS=0.594;HRun=0;HaplotypeScore=75.3710;InbreedingCoeff=0.5949;MQ=83.26;MQ0=3;MQRankSum=-1.741;QD=9.27;ReadPosRankSum=3.998;VQSLOD=3.5762;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,5:25:15.31:195,15,0	1/1:2,0:2:2.89:16,3,0	0/1:19,0:15:18.46:18,0,157	0/1:18,0:17:14.74:15,0,228	0/0:9,0:9:12:0,12,114	0/1:4,6:10:14.30:105,0,14	1/1:17,7:24:21.80:352,22,0	0/0:11,0:11:17.99:0,18,155	0/1:8,1:8:1.18:68,0,1	0/0:6,0:6:9.02:0,9,98	0/0:7,0:7:17.97:0,18,191	1/1:6,5:11:5.97:72,6,0	1/1:1,4:5:6.01:79,6,0	1/1:1,5:6:6.01:79,6,0	0/0:13,0:13:24:0,24,246	0/0:10,0:10:21.48:0,21,222	0/0:12,0:11:20.23:0,20,189	1/1:10,2:12:26.10:208,26,0	0/0:9,0:9:17.95:0,18,144	0/0:1,0:1:3:0,3,26	0/0:30,0:29:59.16:0,59,491	0/0:3,0:3:6.01:0,6,68	1/1:3,6:9:12.03:152,12,0	1/1:5,12:16:30:376,30,0	1/1:6,0:6:8.89:67,9,0	0/0:6,0:6:14.94:0,15,120	0/0:10,0:10:13.51:0,14,115	0/0:10,0:10:10.23:0,10,75
chr10	103340285	.	CA	C	413.98	PASS	AB=0.887;AC=8;AF=0.143;AN=56;BaseQRankSum=-0.338;DP=321;FS=1.664;HRun=2;HaplotypeScore=45.7837;InbreedingCoeff=0.0713;MQ=81.98;MQ0=0;MQRankSum=-0.600;QD=5.17;ReadPosRankSum=-2.048;VQSLOD=-0.0276;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:41.28:0,41,341	1/1:3,0:3:2.96:19,3,0	0/1:13,0:13:22.93:23,0,194	0/0:15,0:15:27.93:0,28,266	0/0:9,0:9:24.08:0,24,332	0/0:15,0:15:32.44:0,32,242	0/0:13,0:13:26.92:0,27,215	0/1:13,1:14:8.26:42,0,8	0/0:7,0:7:17.76:0,18,136	0/0:8,0:8:20.96:0,21,221	0/0:6,0:6:18.05:0,18,236	0/0:12,0:12:2.64:0,3,122	0/0:6,0:6:11.90:0,12,94	0/0:5,0:8:17.62:0,18,133	0/0:9,0:9:27.04:0,27,338	0/0:9,0:9:27.06:0,27,331	0/0:29,0:29:84.21:0,84,1126	0/0:21,0:21:34.17:0,34,251	0/1:14,3:17:10.72:184,0,11	0/1:3,1:4:13.63:18,0,14	0/1:17,2:19:24.36:169,0,24	0/0:6,0:6:18.03:0,18,217	0/0:7,0:7:11.91:0,12,88	0/0:7,0:7:9.21:0,9,79	0/0:5,0:5:11.37:0,11,86	0/0:11,0:11:33.08:0,33,403	0/1:8,2:10:18.16:91,0,18	0/0:8,0:8:24.08:0,24,332
chr10	103340933	.	A	AG	2006.24	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-9.563;DP=313;FS=14.796;HRun=6;HaplotypeScore=32.5712;InbreedingCoeff=0.8815;MQ=100.54;MQ0=0;MQRankSum=-1.558;QD=29.94;ReadPosRankSum=-0.063;VQSLOD=2.1032;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.18:0,81,826	0/0:4,0:4:12.03:0,12,122	0/0:14,0:14:19.19:0,19,251	0/0:21,0:21:50.34:0,50,473	0/0:8,0:8:18.04:0,18,184	0/0:10,0:10:30.05:0,30,296	0/0:24,0:24:66.15:0,66,673	1/1:3,11:14:33.11:413,33,0	0/0:9,0:9:24.01:0,24,234	0/0:16,0:16:45.10:0,45,459	0/0:2,0:2:6:0,6,55	0/0:10,0:10:30.02:0,30,286	0/0:2,0:2:6.01:0,6,61	0/0:7,0:7:21.05:0,21,214	0/0:8,0:8:21.04:0,21,214	0/0:7,0:7:18.04:0,18,184	0/0:13,0:13:33.06:0,33,330	0/0:10,0:10:30.07:0,30,306	1/1:0,10:10:30.08:363,30,0	1/1:1,1:2:3.01:38,3,0	1/1:4,30:34:87.28:1094,87,0	0/0:5,0:5:12.03:0,12,122	0/0:7,0:7:15.03:0,15,153	0/0:17,0:17:42.05:0,42,418	0/0:6,0:6:14.99:0,15,142	0/0:8,0:8:24.05:0,24,242	1/1:0,7:7:21.07:264,21,0	0/0:8,0:8:24.05:0,24,245
chr10	103341211	.	GAT	G	9054.06	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=9.806;DP=450;FS=1.674;HRun=0;HaplotypeScore=89.7617;InbreedingCoeff=0.9511;MQ=59.75;MQ0=14;MQRankSum=-1.235;QD=43.32;ReadPosRankSum=1.810;VQSLOD=6.5212;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:84.29:1366,84,0	1/1:0,3:3:9.03:147,9,0	0/0:14,0:9:27.06:0,27,457	0/0:20,0:14:42.14:0,42,814	0/0:5,0:5:15.03:0,15,268	1/1:1,14:15:45.07:671,45,0	1/1:1,27:26:63.17:998,63,0	0/0:24,0:21:57.19:0,57,1115	1/1:0,13:13:36.12:586,36,0	0/0:14,0:13:36.12:0,36,709	0/0:6,0:6:18.06:0,18,361	1/1:1,15:14:42.14:685,42,0	1/1:0,19:19:57.19:924,57,0	1/1:1,15:15:42.14:670,42,0	0/0:15,0:15:45.15:0,45,913	0/0:16,0:16:48.16:0,48,973	0/0:29,0:29:84.29:0,84,1690	1/1:0,27:27:69.24:1114,69,0	0/0:25,0:21:54.10:0,54,1014	0/0:5,0:4:12.04:0,12,243	0/0:28,0:28:81.23:0,81,1600	0/0:1,0:1:3.01:0,3,61	1/1:0,3:3:9.03:146,9,0	1/1:0,33:32:87.30:1406,87,0	1/1:1,7:7:21.07:342,21,0	0/0:11,0:11:33.11:0,33,669	0/0:14,0:14:36.09:0,36,617	0/0:14,0:14:42.14:0,42,852
chr10	103341284	.	A	AAAG	10194.23	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=4.011;DP=409;FS=2.606;HRun=0;HaplotypeScore=93.5868;InbreedingCoeff=0.8991;MQ=70.61;MQ0=5;MQRankSum=-6.429;QD=35.90;ReadPosRankSum=2.326;VQSLOD=5.6320;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,23:37:87.02:1613,87,0	1/1:0,2:2:3.01:63,3,0	0/0:10,0:7:13.58:0,14,168	0/0:14,0:14:33.47:0,33,399	0/0:2,0:2:6.02:0,6,92	1/1:3,20:24:48.16:977,48,0	1/1:6,18:24:60.18:1156,60,0	1/1:5,3:18:38.08:445,38,0	1/1:4,8:11:30.05:550,30,0	0/0:13,0:13:39.07:0,39,455	0/0:3,0:3:6.01:0,6,74	1/1:5,4:8:17.97:255,18,0	1/1:5,5:10:23.92:379,24,0	1/1:8,6:15:29.98:484,30,0	0/0:15,0:15:39.10:0,39,540	0/0:13,0:13:39.12:0,39,561	0/0:27,0:27:78.18:0,78,1107	1/1:4,21:25:63.18:1283,63,0	1/1:3,0:11:30.07:429,30,0	1/1:6,0:9:11.07:149,11,0	1/1:6,1:22:29.13:411,29,0	0/0:5,0:5:15.03:0,15,172	1/1:0,1:1:2.97:20,3,0	1/1:8,27:34:75.17:1522,75,0	1/1:1,2:3:8.99:113,9,0	0/0:14,0:14:39.11:0,39,544	1/1:2,2:19:24.08:345,24,0	0/0:9,0:9:24.04:0,24,323
chr10	103341561	.	TG	T	979.55	PASS	AB=0.750;AC=10;AF=0.179;AN=56;BaseQRankSum=5.522;DP=516;FS=15.675;HRun=2;HaplotypeScore=82.8009;InbreedingCoeff=0.4878;MQ=50.40;MQ0=69;MQRankSum=-5.491;QD=10.10;ReadPosRankSum=-1.182;VQSLOD=0.0675;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:32:15.98:0,16,149	0/0:5,0:4:0.20:0,0,72	0/0:54,0:15:38.94:0,39,466	0/0:61,0:17:41.06:0,41,494	0/0:11,0:9:21.07:0,21,291	0/0:25,0:20:31.41:0,31,255	0/0:31,0:27:25.58:0,26,223	1/1:3,15:15:45.14:568,45,0	0/1:8,2:7:12.95:52,0,13	0/0:20,0:19:53.65:0,54,667	0/0:10,0:9:20.97:0,21,249	0/0:12,0:7:8.97:0,9,70	0/0:7,0:7:8.98:0,9,84	0/0:11,0:7:10.77:0,11,71	0/0:7,0:7:17.03:0,17,179	0/0:11,0:9:29.53:0,30,345	0/0:28,0:28:72.18:0,72,954	0/1:11,1:10:29.47:29,0,34	0/1:6,5:8:8.49:119,0,8	1/1:4,9:12:18.15:200,18,0	0/1:5,20:22:1.89:3,0,2	0/0:3,0:3:6.01:0,6,70	0/0:11,0:6:5.97:0,6,44	0/0:26,0:23:14.95:0,15,145	0/0:13,0:12:11.38:0,11,71	0/0:21,1:22:55.66:0,56,781	1/1:3,5:6:14.53:162,15,0	0/0:13,0:13:37.58:0,38,433
chr10	103341562	.	GGT	G	652.58	PASS	AB=0.920;AC=30;AF=0.600;AN=50;BaseQRankSum=5.576;DP=520;FS=1.714;HRun=0;HaplotypeScore=88.2261;InbreedingCoeff=0.3395;MQ=50.07;MQ0=70;MQRankSum=-5.834;QD=2.46;ReadPosRankSum=0.137;VQSLOD=2.0338;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:33:11.22:53,11,0	1/1:5,0:4:8.43:40,8,0	./.	./.	0/0:11,0:9:6.02:0,6,89	1/1:25,0:20:25.47:123,25,0	1/1:30,0:27:22.42:106,22,0	./.	1/1:10,0:7:5.32:26,5,0	0/1:18,1:18:26.49:26,0,38	0/1:10,0:9:13.98:14,0,71	1/1:13,0:8:5.68:28,6,0	1/1:7,0:7:5.68:28,6,0	1/1:11,0:7:11.12:52,11,0	1/1:6,1:7:6.02:65,6,0	0/1:10,1:9:20.69:21,0,113	0/0:26,1:27:6.85:0,7,463	1/1:12,0:10:2.84:14,3,0	0/0:9,0:6:2.92:0,3,17	0/0:10,0:11:1.18:0,1,2	0/0:23,0:21:5:0,5,27	0/0:3,0:3:3.01:0,3,45	1/1:11,0:6:5.68:28,6,0	1/1:28,0:25:8.34:42,8,0	1/1:13,0:12:14.11:67,14,0	0/0:22,0:22:9.43:0,9,249	0/0:7,0:6:2.68:0,3,11	0/1:10,3:13:77.14:77,0,158
chr10	103341567	.	GTGTGTGTGT	G	4590.81	PASS	AB=0.633;AC=22;AF=0.393;AN=56;BaseQRankSum=6.029;DP=533;FS=0.000;HRun=0;HaplotypeScore=110.7324;InbreedingCoeff=0.7390;MQ=46.73;MQ0=75;MQRankSum=-7.796;QD=22.73;ReadPosRankSum=2.921;VQSLOD=3.5971;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,26:31:27.04:610,27,0	1/1:1,3:3:9.03:291,9,0	0/0:55,0:11:9.27:0,9,288	0/0:67,0:13:34.94:0,35,436	0/0:12,0:10:24.08:0,24,761	1/1:3,16:20:33.11:920,33,0	1/1:3,25:27:26.84:820,27,0	0/0:21,0:18:50.26:0,50,799	0/1:5,6:8:88.54:89,0,148	0/0:20,0:19:57.18:0,57,1234	0/0:10,0:9:21.07:0,21,822	1/1:5,6:7:6.02:135,6,0	1/1:0,5:5:6.49:196,6,0	1/1:2,8:8:12.04:386,12,0	0/0:9,0:9:21.07:0,21,461	0/0:10,0:8:27.09:0,27,738	0/0:26,0:26:70.46:0,70,2317	0/1:5,7:11:71.07:170,0,71	0/0:14,0:10:22.74:0,23,450	0/0:8,0:9:16.72:0,17,138	0/0:27,0:25:11.05:0,11,232	0/0:3,0:3:3.01:0,3,152	1/1:3,5:6:6.49:196,6,0	1/1:3,22:24:8.61:293,9,0	1/1:0,13:13:15.05:486,15,0	0/0:22,0:22:63.21:0,63,2007	0/0:11,0:9:18.02:0,18,419	0/0:13,0:13:39.13:0,39,1267
chr10	103342995	.	T	TAC	569.15	PASS	AB=0.886;AC=24;AF=0.522;AN=46;BaseQRankSum=-2.614;DP=528;FS=4.278;HRun=0;HaplotypeScore=86.6702;InbreedingCoeff=0.4858;MQ=57.32;MQ0=4;MQRankSum=0.417;QD=2.15;ReadPosRankSum=-1.699;VQSLOD=1.4872;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,5:32:6.02:88,6,0	1/1:7,2:10:3.01:44,3,0	./.	./.	./.	1/1:16,0:15:8.89:91,9,0	1/1:42,0:42:8.74:102,9,0	0/1:20,0:20:0:0,0,0	0/1:12,4:17:34.99:35,0,55	0/0:16,0:16:2.74:0,3,12	0/0:3,0:5:5.68:0,6,28	1/1:16,2:18:3.01:44,3,0	1/1:7,5:14:6.02:88,6,0	1/1:18,3:21:3.01:44,3,0	0/0:19,0:24:11.36:0,11,56	0/0:14,0:17:8.52:0,9,42	0/0:20,0:25:11.36:0,11,56	0/0:15,0:15:7.19:0,7,49	0/0:17,0:15:2.88:0,3,15	./.	./.	0/0:10,0:11:2.84:0,3,14	1/1:10,4:15:3.01:45,3,0	1/1:14,4:20:9.03:132,9,0	1/1:20,0:20:0.47:1,0,0	1/1:19,0:19:0.94:1,1,0	0/0:11,0:13:8.28:0,8,38	0/0:5,0:9:11.07:0,11,49
chr10	103343048	.	G	GA	4060.16	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-0.233;DP=522;FS=1.460;HRun=1;HaplotypeScore=82.8656;InbreedingCoeff=0.9757;MQ=77.77;MQ0=5;MQRankSum=-1.652;QD=38.67;ReadPosRankSum=-2.696;VQSLOD=3.1068;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:48.16:0,48,669	0/0:10,0:10:15.05:0,15,208	0/0:38,0:24:66.07:0,66,857	0/0:38,0:27:65.97:0,66,801	0/0:12,0:12:21.07:0,21,294	0/0:15,0:14:36.12:0,36,503	0/0:25,0:25:65.88:0,66,922	1/1:4,29:30:78.27:1247,78,0	0/0:19,0:19:51.15:0,51,693	0/0:17,0:17:42.14:0,42,588	0/0:10,0:10:24.08:0,24,336	0/0:15,0:15:35.76:0,36,503	0/0:9,0:9:15.05:0,15,209	0/0:11,0:11:27.09:0,27,378	0/0:24,0:24:69.22:0,69,944	0/0:13,0:13:39.13:0,39,545	0/0:35,0:34:99:0,102,1425	0/0:21,0:21:63.21:0,63,872	1/1:1,10:11:33.11:511,33,0	1/1:0,12:12:27.23:432,27,0	1/1:0,30:30:69.33:1103,69,0	0/0:11,0:11:27.09:0,27,378	0/0:9,0:9:8.54:0,9,125	0/0:22,0:22:48.16:0,48,670	0/0:16,0:16:42.14:0,42,587	0/0:12,0:12:36.12:0,36,501	1/1:2,17:17:48.16:766,48,0	0/0:15,0:15:33.11:0,33,461
chr10	103344114	.	CGT	C	4337.94	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.741;DP=547;FS=1.900;HRun=0;HaplotypeScore=69.8576;InbreedingCoeff=0.9994;MQ=82.78;MQ0=0;MQRankSum=-1.939;QD=46.64;ReadPosRankSum=-0.480;VQSLOD=5.8871;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1946	0/0:10,0:10:30.10:0,30,609	0/0:12,0:13:36.11:0,36,674	0/0:21,0:21:58.01:0,58,1046	0/0:27,0:27:81.28:0,81,1636	0/0:15,0:15:45.15:0,45,883	0/0:22,0:22:66.23:0,66,1294	1/1:1,21:22:63.22:1022,63,0	0/0:19,0:19:57.20:0,57,1137	0/0:21,0:21:60.21:0,60,1216	0/0:11,0:11:33.11:0,33,670	0/0:23,0:23:69.22:0,69,1288	0/0:18,0:18:54.19:0,54,1072	0/0:22,0:22:66.23:0,66,1336	0/0:15,0:15:45.15:0,45,894	0/0:21,0:21:63.22:0,63,1263	0/0:33,0:33:99:0,99,2009	0/0:17,0:17:51.17:0,51,1021	1/1:0,15:15:45.15:721,45,0	1/1:0,13:13:39.13:636,39,0	1/1:0,32:32:87.30:1419,87,0	0/0:20,0:20:60.21:0,60,1209	0/0:16,0:16:45.15:0,45,913	0/0:27,0:27:81.28:0,81,1598	0/0:13,0:13:39.13:0,39,791	0/0:27,0:27:81.28:0,81,1614	1/1:0,11:11:33.11:538,33,0	0/0:9,0:9:27.09:0,27,548
chr10	103344639	.	ATGTT	A	9471.59	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=13.360;DP=537;FS=6.595;HRun=0;HaplotypeScore=115.0646;InbreedingCoeff=0.9016;MQ=67.03;MQ0=1;MQRankSum=-6.061;QD=28.62;ReadPosRankSum=0.778;VQSLOD=4.2099;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,32:43:87.30:1439,87,0	1/1:0,6:6:15.05:252,15,0	0/1:19,0:18:9.37:9,0,210	0/0:17,0:11:18.06:0,18,387	0/0:22,0:22:50.94:0,51,1147	1/1:3,21:24:48.16:795,48,0	1/1:4,8:12:18.06:302,18,0	1/1:10,10:20:42.05:597,42,0	1/1:7,10:17:27.09:442,27,0	0/0:23,0:23:63.10:0,63,1373	0/0:14,0:14:36.12:0,36,886	1/1:3,13:16:36.12:580,36,0	1/1:3,8:11:18.06:302,18,0	1/1:5,10:15:24.08:382,24,0	0/0:25,0:24:63.17:0,63,1357	0/0:27,0:27:66.19:0,66,1528	0/0:36,0:36:93.28:0,93,2222	1/1:5,23:28:60.21:1007,60,0	1/1:13,9:21:30.05:447,30,0	1/1:3,7:10:24.04:371,24,0	1/1:11,4:15:18.01:247,18,0	0/0:8,0:8:18.06:0,18,414	1/1:4,13:17:20.93:398,21,0	1/1:5,6:11:7.10:241,7,0	1/1:3,16:19:48.16:806,48,0	0/0:30,0:30:57.18:0,57,1312	1/1:6,20:26:51.17:854,51,0	0/0:4,0:4:9.03:0,9,222
chr10	103344666	.	G	GATT	3125.83	PASS	AB=0.632;AC=9;AF=0.161;AN=56;BaseQRankSum=7.850;DP=494;FS=47.793;HRun=0;HaplotypeScore=112.5164;InbreedingCoeff=0.7955;MQ=49.70;MQ0=18;MQRankSum=-10.919;QD=35.93;ReadPosRankSum=-4.261;VQSLOD=1.5940;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,105,1663	0/0:8,0:7:18.06:0,18,284	0/0:8,0:2:6.02:0,6,85	0/0:5,0:3:6.02:0,6,74	0/0:22,0:20:54.18:0,54,855	0/0:20,0:20:45.15:0,45,711	0/0:13,0:10:21.07:0,21,301	1/1:15,10:20:54.18:1001,54,0	0/0:16,0:14:36.12:0,36,577	0/0:20,0:20:54.18:0,54,864	0/0:18,0:18:48.16:0,48,785	0/0:15,0:15:30.10:0,30,444	0/0:11,0:10:21.07:0,21,342	0/0:13,0:13:21.03:0,21,297	0/0:25,0:23:69.22:0,69,1095	0/0:26,0:26:75.21:0,75,1140	0/0:39,0:38:99:0,108,1752	0/0:25,0:23:60.20:0,60,974	1/1:11,11:15:33.11:555,33,0	0/1:5,7:12:16.87:546,0,17	1/1:5,3:8:15.04:204,15,0	0/0:6,0:6:12.03:0,12,159	0/0:13,0:13:23.86:0,24,377	0/0:12,0:11:27.08:0,27,422	0/0:25,0:24:51.17:0,51,823	0/0:21,0:21:60.19:0,60,936	1/1:9,11:19:54.14:981,54,0	0/0:4,0:4:9.03:0,9,142
chr10	103344860	.	A	ATT	5222.29	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=15.484;DP=540;FS=17.078;HRun=7;HaplotypeScore=89.2149;InbreedingCoeff=0.9920;MQ=64.05;MQ0=0;MQRankSum=-5.112;QD=15.78;ReadPosRankSum=1.419;VQSLOD=1.5915;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:41:74.58:262,75,0	1/1:0,0:7:14.97:53,15,0	0/0:20,0:20:38.67:0,39,394	0/0:14,0:13:27.04:0,27,301	0/0:31,0:31:90.21:0,90,1011	1/1:4,0:21:39.93:140,40,0	1/1:0,0:17:29.94:105,30,0	1/1:4,24:29:75.21:1134,75,0	1/1:0,0:19:44.92:158,45,0	0/0:22,0:22:51.12:0,51,586	0/0:18,0:18:51.13:0,51,584	1/1:1,0:29:52.40:184,52,0	1/1:3,0:14:27.32:96,27,0	1/1:2,0:12:22.18:78,22,0	0/0:25,0:25:72.21:0,72,835	0/0:15,0:15:45.13:0,45,524	0/0:26,0:25:60.12:0,60,673	1/1:1,0:17:14.81:87,15,0	1/1:4,12:15:33.07:490,33,0	1/1:3,17:21:51.14:803,51,0	1/1:3,15:18:36.12:591,36,0	0/0:14,0:14:42.11:0,42,478	1/1:0,0:14:32.44:114,32,0	1/1:2,0:22:34.93:123,35,0	1/1:1,0:15:32.44:114,32,0	0/0:19,0:19:51.14:0,51,593	1/1:1,16:19:42.14:689,42,0	0/0:5,0:5:15.04:0,15,173
chr10	103345134	.	T	TG	15199.22	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=1.403;DP=713;FS=0.291;HRun=3;HaplotypeScore=83.3842;InbreedingCoeff=0.9988;MQ=82.81;MQ0=0;MQRankSum=-3.117;QD=35.60;ReadPosRankSum=1.011;VQSLOD=5.2266;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,41:46:99:1554,111,0	1/1:1,12:13:35.99:477,36,0	0/0:24,0:24:66.18:0,66,772	0/0:23,0:23:60.04:0,60,665	0/0:30,0:30:80.61:0,81,970	1/1:0,20:20:54.18:756,54,0	1/1:2,24:26:72.24:1008,72,0	1/1:6,23:29:69.21:931,69,0	1/1:1,29:30:75.21:1028,75,0	0/0:24,0:24:69.21:0,69,828	0/0:19,0:19:54.12:0,54,631	1/1:0,27:27:72.24:1008,72,0	1/1:0,19:19:54.16:756,54,0	1/1:1,18:19:45.12:609,45,0	0/0:34,0:34:93.26:0,93,1094	0/0:28,0:28:81.25:0,81,972	0/0:38,0:38:99:0,111,1331	1/1:0,23:23:63.17:860,63,0	1/1:3,28:31:84.20:1117,84,0	1/1:0,16:16:42.14:588,42,0	1/1:3,32:35:78.26:1092,78,0	0/0:27,0:27:78.21:0,78,910	1/1:0,14:14:42.14:587,42,0	1/1:4,39:43:99:1470,105,0	1/1:2,13:15:38.64:519,39,0	0/0:33,0:33:84.21:0,84,992	1/1:0,21:21:60.20:840,60,0	0/0:6,0:6:18.06:0,18,216
chr10	103346136	.	GT	G	4962.71	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.383;DP=728;FS=4.204;HRun=2;HaplotypeScore=92.2974;InbreedingCoeff=0.9997;MQ=75.70;MQ0=0;MQRankSum=-0.858;QD=36.49;ReadPosRankSum=-2.138;VQSLOD=4.3304;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,154,2265	0/0:12,0:12:36.12:0,36,534	0/0:17,0:17:51.16:0,51,719	0/0:20,0:20:50.04:0,50,731	0/0:25,0:25:75.25:0,75,1119	0/0:21,0:21:57.18:0,57,824	0/0:30,0:30:90.30:0,90,1333	1/1:1,22:23:66.20:840,66,0	0/0:26,0:26:75.25:0,75,1092	0/0:37,0:36:99:0,108,1598	0/0:18,0:18:54.18:0,54,806	0/0:33,0:33:90.30:0,90,1336	0/0:22,0:22:66.18:0,66,943	0/0:24,0:24:72.23:0,72,1030	0/0:32,0:32:93.29:0,93,1333	0/0:28,0:28:84.28:0,84,1248	0/0:26,0:26:75.21:0,75,1097	0/0:36,0:36:99:0,102,1504	1/1:0,21:21:63.20:817,63,0	1/1:0,23:23:66.21:854,66,0	1/1:0,43:43:99:1597,123,0	0/0:27,0:27:81.27:0,81,1209	0/0:20,0:20:60.20:0,60,899	0/0:32,0:32:96.31:0,96,1401	0/0:19,0:19:57.16:0,57,811	0/0:27,0:27:78.26:0,78,1169	1/1:1,25:26:66.21:854,66,0	0/0:9,0:9:27.07:0,27,382
chr10	103346353	.	AAAAAG	A	6967.50	PASS	AB=0.895;AC=25;AF=0.446;AN=56;BaseQRankSum=11.425;DP=546;FS=10.531;HRun=0;HaplotypeScore=105.2021;InbreedingCoeff=0.9104;MQ=59.49;MQ0=7;MQRankSum=-3.953;QD=29.78;ReadPosRankSum=5.692;VQSLOD=3.9317;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:31:30.05:1253,30,0	1/1:1,3:4:9.03:170,9,0	0/0:20,0:16:31.57:0,32,452	0/0:26,0:18:14.95:0,15,897	0/0:27,0:26:66.23:0,66,1799	1/1:4,14:18:33.07:567,33,0	1/1:7,13:18:36.12:680,36,0	0/0:29,0:27:75.17:0,75,1833	1/1:3,9:12:24.04:411,24,0	0/0:30,0:28:72.23:0,72,1815	0/0:17,0:17:48.16:0,48,1249	1/1:7,13:16:24.08:453,24,0	1/1:5,13:18:30.10:567,30,0	1/1:6,7:12:11.98:221,12,0	0/0:17,0:17:45.15:0,45,1294	0/1:15,2:17:71.22:71,0,939	0/0:23,0:23:60.16:0,60,1516	1/1:9,17:25:45.15:850,45,0	0/0:16,0:16:45.12:0,45,1212	0/0:19,0:19:54.18:0,54,1388	0/0:12,0:10:21.07:0,21,582	0/0:22,0:21:54.18:0,54,1461	1/1:2,13:15:30.02:493,30,0	1/1:5,18:22:48.16:891,48,0	1/1:6,11:17:18.06:340,18,0	0/0:20,0:20:54.18:0,54,1369	0/0:23,0:23:60.20:0,60,1590	0/0:10,0:9:27.09:0,27,688
chr10	103346949	.	C	CCT	419.35	PASS	AB=0.882;AC=6;AF=0.107;AN=56;BaseQRankSum=0.783;DP=778;FS=0.000;HRun=0;HaplotypeScore=65.2406;InbreedingCoeff=0.0744;MQ=30.80;MQ0=363;MQRankSum=-2.322;QD=7.62;ReadPosRankSum=0.004;VQSLOD=2.7935;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:19:30.99:0,31,418	0/0:9,0:8:17.85:0,18,208	0/0:24,0:6:9.84:0,10,85	0/0:21,0:9:13.29:0,13,169	0/0:8,0:7:12.04:0,12,168	0/0:108,0:6:5.85:0,6,61	0/0:37,0:27:71.92:0,72,1007	0/1:5,0:5:35.98:46,0,36	0/0:30,0:13:24.08:0,24,336	0/0:19,0:17:39.13:0,39,542	0/0:15,0:14:8.77:0,9,126	0/0:61,0:19:45.15:0,45,624	0/0:68,0:26:62.75:0,63,863	0/0:44,0:14:32.66:0,33,458	0/0:46,0:18:19.54:0,20,414	0/0:54,0:17:15.03:0,15,594	0/0:35,0:24:56.38:0,56,779	0/0:29,0:21:47.43:0,47,608	0/1:2,2:4:33.23:99,0,33	1/1:3,3:6:3.01:54,3,0	0/1:21,4:16:54.72:147,0,55	0/0:12,0:10:11.78:0,12,164	0/0:5,0:3:3.01:0,3,42	0/0:42,0:33:69.04:0,69,942	0/0:11,0:8:14.88:0,15,177	0/0:20,0:12:27.52:0,28,308	0/1:15,0:11:52.48:192,0,52	0/0:2,0:1:3.01:0,3,42
chr10	103346951	.	TCTGC	T	413.31	PASS	AB=0.870;AC=7;AF=0.125;AN=56;BaseQRankSum=0.697;DP=846;FS=0.000;HRun=0;HaplotypeScore=73.0096;InbreedingCoeff=0.0353;MQ=28.80;MQ0=444;MQRankSum=-2.487;QD=3.83;ReadPosRankSum=-0.279;VQSLOD=1.1812;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:18:30.57:0,31,415	0/0:9,0:8:18.58:0,19,210	0/0:20,0:5:9.84:0,10,85	0/0:19,0:8:13.29:0,13,173	0/0:8,0:7:12.04:0,12,168	0/0:121,0:6:6.41:0,6,59	0/0:39,0:27:72.19:0,72,1008	0/1:2,2:4:36:47,0,36	0/0:38,0:13:25.64:0,26,364	0/0:17,0:15:39.13:0,39,551	0/0:15,0:14:8.55:0,9,126	0/0:75,0:19:45.15:0,45,632	0/0:76,0:27:25.53:0,26,825	0/0:57,0:14:34.47:0,34,473	0/1:57,0:16:3.49:3,0,390	0/0:61,0:17:6.60:0,7,582	0/0:36,0:24:58.06:0,58,785	0/0:30,0:21:50.91:0,51,688	0/1:4,0:4:35.73:96,0,36	1/1:5,0:5:3.01:53,3,0	0/1:23,0:14:44.36:143,0,44	0/0:11,0:10:12.04:0,12,159	0/0:5,0:3:2.81:0,3,41	0/0:43,0:34:67.68:0,68,931	0/0:11,0:8:14.55:0,15,176	0/0:23,0:11:26.78:0,27,332	0/1:8,7:11:55.11:192,0,55	0/0:2,0:1:3.01:0,3,45
chr10	103347011	.	TCTGC	T	745.32	PASS	AB=0.888;AC=5;AF=0.114;AN=44;BaseQRankSum=3.182;DP=966;FS=16.068;HRun=0;HaplotypeScore=61.2418;InbreedingCoeff=-0.1178;MQ=14.08;MQ0=702;MQRankSum=-0.429;QD=5.29;ReadPosRankSum=1.255;VQSLOD=0.1938;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:1:3.01:0,3,45	0/0:2,0:1:3.01:0,3,42	./.	./.	./.	0/0:125,0:4:9.03:0,9,132	0/1:35,0:11:75.06:75,0,152	0/1:14,14:23:99:611,0,181	0/0:75,0:13:18.56:0,19,274	0/0:14,0:5:15.05:0,15,219	0/0:7,0:5:3.48:0,3,43	0/0:105,0:12:23.05:0,23,316	0/0:74,0:8:15.52:0,16,204	0/0:86,0:4:9.03:0,9,156	0/0:75,0:9:11.08:0,11,205	0/0:63,0:16:24.10:0,24,449	0/0:34,0:15:33.11:0,33,457	0/1:35,0:20:4.87:5,0,480	0/1:27,3:10:99:124,0,225	./.	0/0:39,1:16:3.28:0,3,21	0/0:3,0:2:0:0,0,0	./.	0/0:41,0:21:13.88:0,14,103	0/0:5,0:4:3.01:0,3,42	0/0:53,0:4:12.04:0,12,160	0/1:11,2:7:34.64:35,0,170	./.
chr10	103347027	.	CCT	C	82.66	PASS	AB=0.967;AC=9;AF=0.196;AN=46;BaseQRankSum=2.854;DP=694;FS=2.290;HRun=0;HaplotypeScore=68.7112;InbreedingCoeff=-0.0190;MQ=18.98;MQ0=380;MQRankSum=-0.483;QD=0.33;ReadPosRankSum=-3.975;VQSLOD=0.8132;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:2:1.25:3,1,0	0/0:3,0:2:3.01:0,3,49	./.	./.	./.	0/0:55,0:7:4.72:0,5,68	0/0:35,0:16:15.87:0,16,369	0/0:33,0:25:59.06:0,59,915	0/1:43,1:14:25.17:25,0,180	0/0:18,0:7:11.40:0,11,197	0/0:7,0:6:3.01:0,3,50	0/1:58,3:15:72.71:73,0,229	0/0:47,0:10:16.94:0,17,232	0/1:49,2:9:73.13:73,0,188	0/0:45,0:15:33.47:0,33,564	0/0:37,0:20:43.78:0,44,682	0/0:28,0:13:29.56:0,30,450	0/1:30,2:18:8.54:9,0,363	0/0:39,0:18:47.38:0,47,746	0/0:8,0:5:2.63:0,3,48	0/0:39,0:17:3.48:0,3,51	1/1:7,0:4:0.14:1,0,0	./.	0/1:40,0:19:3.28:3,0,33	0/0:5,0:2:3.01:0,3,49	0/0:22,0:5:14.63:0,15,177	0/0:11,0:8:15.60:0,16,280	./.
chr10	103347110	.	CCTCTGCCT	C	384.89	PASS	AB=0.894;AC=11;AF=0.229;AN=48;BaseQRankSum=2.773;DP=486;FS=5.484;HRun=0;HaplotypeScore=93.1418;InbreedingCoeff=0.0662;MQ=27.76;MQ0=176;MQRankSum=-3.359;QD=2.15;ReadPosRankSum=0.178;VQSLOD=1.3773;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:5:0.47:2,0,0	./.	./.	./.	0/0:9,0:5:6.49:0,6,211	0/0:7,2:4:3.01:0,3,65	0/1:27,2:20:69.08:69,0,127	0/0:19,0:6:2.97:0,3,21	0/0:17,0:8:0.59:0,1,73	0/0:18,0:5:9.01:0,9,130	./.	1/1:24,9:21:9.03:243,9,0	1/1:17,2:15:2.75:45,3,0	0/1:20,7:21:39.49:39,0,54	0/0:20,0:14:15.82:0,16,464	0/0:22,0:20:48.15:0,48,1381	0/0:37,0:28:57.18:0,57,1769	0/1:19,3:12:38.21:38,0,75	0/0:23,0:6:9.01:0,9,104	0/0:4,0:2:2.98:0,3,22	0/0:43,0:20:2.36:0,2,7	0/0:9,0:3:3.01:0,3,43	0/0:9,1:4:0:0,0,0	0/1:20,4:15:56.62:57,0,134	0/0:22,2:6:1.83:0,2,72	0/0:22,0:10:18.06:0,18,493	0/1:7,0:5:14.98:15,0,98	0/0:2,0:2:6.02:0,6,180
chr10	103347116	.	CCT	C	168.48	PASS	AB=0.936;AC=9;AF=0.180;AN=50;BaseQRankSum=3.510;DP=480;FS=2.844;HRun=0;HaplotypeScore=75.3667;InbreedingCoeff=-0.1322;MQ=27.69;MQ0=189;MQRankSum=-3.633;QD=1.04;ReadPosRankSum=1.125;VQSLOD=1.4924;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,1:5:2.07:0,2,32	0/0:9,0:3:4.74:0,5,104	./.	./.	0/0:10,0:6:9.03:0,9,162	0/0:8,0:4:3.01:0,3,35	0/1:25,0:16:35.10:35,0,71	0/0:22,0:6:12.49:0,12,112	0/0:17,0:8:10.27:0,10,124	0/0:20,0:6:11.55:0,12,212	0/0:3,0:1:3.01:0,3,54	0/1:28,0:18:69.24:69,0,127	0/0:16,3:15:15.23:0,15,246	0/1:24,1:19:23.68:24,0,106	0/0:20,0:13:25.31:0,25,378	0/0:22,0:20:51.17:0,51,877	0/0:37,0:29:66.22:0,66,1132	0/1:19,0:9:24.13:24,0,144	0/1:23,3:6:27.14:27,0,125	1/1:3,1:1:2.96:19,3,0	0/0:35,6:17:3.60:0,4,7	0/0:8,0:3:3.01:0,3,46	./.	0/1:23,1:15:51.13:51,0,213	0/0:26,0:6:2.70:0,3,48	0/0:22,0:11:23.98:0,24,362	0/1:7,4:8:46.48:46,0,130	0/0:2,0:2:6.02:0,6,107
chr10	103347124	.	CCT	C	351.09	PASS	AB=0.906;AC=10;AF=0.200;AN=50;BaseQRankSum=3.878;DP=463;FS=1.189;HRun=0;HaplotypeScore=70.3089;InbreedingCoeff=-0.1358;MQ=26.96;MQ0=190;MQRankSum=-4.007;QD=2.07;ReadPosRankSum=0.652;VQSLOD=1.6813;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,1:3:32.94:33,0,81	0/0:9,1:4:1.72:0,2,49	./.	./.	0/0:10,0:6:15.05:0,15,249	0/0:8,0:3:3.01:0,3,54	0/1:18,1:12:38.46:38,0,179	0/0:23,0:4:5:0,5,26	0/1:15,2:8:31.70:32,0,98	0/0:21,0:8:11.55:0,12,213	./.	0/1:21,1:13:31.53:32,0,42	1/1:13,2:12:3.40:52,3,0	0/1:21,2:16:36.60:59,0,37	0/0:16,0:9:19.31:0,19,325	0/0:21,0:19:49.34:0,49,811	0/0:38,0:30:75.24:0,75,1335	0/1:17,3:12:61.36:88,0,61	0/0:24,0:5:8.94:0,9,93	0/0:6,1:4:5.65:0,6,78	0/0:32,1:16:2.36:0,2,7	0/0:9,0:2:6.02:0,6,106	0/0:14,0:5:0:0,0,0	0/1:22,2:14:26.50:26,0,107	0/0:28,1:8:2.98:0,3,54	0/0:22,0:10:27.09:0,27,484	0/1:11,3:8:83.69:121,0,84	0/0:2,0:2:6.02:0,6,108
chr10	103347126	.	TCTCTGC	T	133.60	PASS	AB=0.950;AC=6;AF=0.125;AN=48;BaseQRankSum=3.022;DP=473;FS=4.537;HRun=0;HaplotypeScore=82.4436;InbreedingCoeff=0.1354;MQ=26.57;MQ0=201;MQRankSum=-3.348;QD=1.44;ReadPosRankSum=1.049;VQSLOD=1.3135;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:3:9.01:0,9,107	0/0:9,0:3:3.01:0,3,38	./.	./.	0/0:10,0:6:15.52:0,16,316	0/0:8,0:3:3.01:0,3,41	0/1:19,0:12:16.38:16,0,188	1/1:26,0:6:7.24:59,7,0	0/0:18,0:8:10.27:0,10,121	0/0:25,0:8:17.04:0,17,291	./.	0/1:22,0:13:29.92:115,0,30	0/0:16,0:13:7.40:0,7,47	0/0:22,0:17:7.52:0,8,83	0/0:15,0:9:18.06:0,18,407	0/0:21,0:20:39.13:0,39,978	0/0:39,0:30:69.23:0,69,1764	0/0:20,0:11:14.92:0,15,146	./.	0/0:8,0:5:5.98:0,6,59	0/0:30,4:15:1.85:0,2,6	0/0:9,0:2:3.01:0,3,42	0/1:14,0:5:0:0,0,0	0/0:23,0:13:8.70:0,9,94	0/0:29,0:7:2.49:0,2,42	0/0:22,0:11:30.10:0,30,671	0/1:9,3:6:51.39:51,0,142	0/0:2,0:2:6.02:0,6,186
chr10	103347138	.	CCT	C	103.91	PASS	AB=0.874;AC=6;AF=0.120;AN=50;BaseQRankSum=3.567;DP=418;FS=1.665;HRun=0;HaplotypeScore=62.1403;InbreedingCoeff=0.0478;MQ=27.38;MQ0=170;MQRankSum=-1.993;QD=1.19;ReadPosRankSum=0.849;VQSLOD=1.3670;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:5:12.04:0,12,206	0/0:5,0:1:3.01:0,3,50	./.	./.	0/0:8,0:6:12.04:0,12,216	0/0:9,1:5:3.01:0,3,37	0/0:14,2:11:13.57:0,14,151	0/0:21,0:5:15.05:0,15,251	0/0:15,2:7:7.27:0,7,111	0/0:19,0:5:15.05:0,15,262	./.	0/0:17,0:12:11.43:0,11,115	0/1:11,3:11:32.10:32,0,54	0/1:18,3:16:34.53:35,0,82	0/0:13,0:8:16.02:0,16,271	0/0:17,0:15:42.14:0,42,744	0/0:41,0:32:66.23:0,66,1187	0/1:19,4:14:1.98:2,0,196	0/0:15,0:1:3.01:0,3,42	0/0:8,1:6:2.58:0,3,37	0/0:31,0:16:4.89:0,5,43	0/0:7,0:2:3.01:0,3,54	0/0:12,0:4:2.94:0,3,50	0/1:17,1:10:26.62:27,0,96	0/0:25,1:7:5.05:0,5,74	0/0:22,0:12:33.11:0,33,571	1/1:8,3:5:11.40:122,11,0	0/0:3,0:2:6.02:0,6,108
chr10	103347146	.	CCT	C	270.91	PASS	AB=0.871;AC=10;AF=0.208;AN=48;BaseQRankSum=3.512;DP=394;FS=0.000;HRun=0;HaplotypeScore=55.0525;InbreedingCoeff=-0.0088;MQ=29.18;MQ0=140;MQRankSum=-3.208;QD=2.02;ReadPosRankSum=-0.939;VQSLOD=1.1813;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:4:11.97:0,12,173	./.	./.	./.	0/0:5,0:5:12.04:0,12,215	0/0:9,2:5:5.95:0,6,55	0/1:15,2:13:45.04:45,0,105	0/0:20,0:5:15.05:0,15,255	0/0:10,2:4:6.02:0,6,106	0/0:17,0:5:15.05:0,15,263	./.	0/1:19,1:13:41.54:93,0,42	0/1:13,4:12:47.80:48,0,58	1/1:16,4:15:3.18:95,3,0	0/0:13,0:8:24.08:0,24,396	0/0:16,0:14:42.14:0,42,714	0/0:42,0:37:88.52:0,89,1505	0/1:17,6:15:78.83:79,0,115	0/0:17,0:3:5.95:0,6,61	1/1:6,1:5:0.47:1,0,0	0/0:23,2:13:3.48:0,3,39	0/0:5,0:1:3.01:0,3,54	0/0:10,0:5:2.94:0,3,18	0/1:17,3:12:26.66:27,0,104	0/0:17,1:5:8.96:0,9,94	0/0:20,0:14:39.07:0,39,655	0/1:9,1:4:4.84:5,0,8	0/0:4,0:2:6.02:0,6,105
chr10	103347156	.	TCTGC	T	288.47	PASS	AB=0.952;AC=8;AF=0.154;AN=52;BaseQRankSum=4.863;DP=821;FS=7.902;HRun=0;HaplotypeScore=70.8894;InbreedingCoeff=0.3532;MQ=22.42;MQ0=532;MQRankSum=-5.295;QD=1.89;ReadPosRankSum=-0.208;VQSLOD=0.6131;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:6:17.99:0,18,264	0/0:5,0:2:3.01:0,3,33	./.	./.	0/0:8,0:6:15.52:0,16,371	0/0:95,0:7:12.03:0,12,257	0/0:24,0:13:10.31:0,10,301	0/1:25,3:5:9.40:143,0,9	0/0:48,0:8:15.15:0,15,269	0/0:19,0:6:15.01:0,15,253	0/0:9,0:3:2.60:0,3,42	0/0:75,0:14:25.73:0,26,535	0/0:60,0:10:16.02:0,16,264	0/0:70,0:13:12.06:0,12,224	0/1:59,0:11:43.98:44,0,539	0/0:46,0:15:13.09:0,13,664	0/0:43,0:35:87.18:0,87,1911	0/0:25,1:17:0.57:0,1,322	0/0:27,0:3:5.95:0,6,88	0/0:3,1:5:0:0,0,0	1/1:37,2:18:4:14,4,0	0/0:5,0:1:3.01:0,3,82	0/0:7,0:3:3.22:0,3,13	0/0:32,0:19:12.90:0,13,225	1/1:18,0:6:1.54:4,2,0	0/0:40,0:15:40.95:0,41,763	1/1:6,3:4:12.03:201,12,0	0/0:5,0:3:9.03:0,9,165
chr10	103347168	.	TCTGC	T	295.13	PASS	AB=0.887;AC=6;AF=0.111;AN=54;BaseQRankSum=4.686;DP=1062;FS=38.873;HRun=0;HaplotypeScore=72.8598;InbreedingCoeff=0.2172;MQ=22.78;MQ0=708;MQRankSum=-4.961;QD=1.81;ReadPosRankSum=-0.762;VQSLOD=-0.0789;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:9:25.33:0,25,378	0/0:6,0:4:9.03:0,9,129	0/0:1,0:1:3.01:0,3,42	./.	0/0:13,0:7:17.09:0,17,375	0/0:131,0:8:21.07:0,21,414	0/1:37,0:22:6.92:7,0,621	0/0:28,1:7:18.01:0,18,199	0/1:66,0:11:43.57:44,0,326	0/0:21,0:4:12.04:0,12,233	0/0:10,0:4:6.02:0,6,84	0/0:102,0:15:10.58:0,11,548	0/0:77,0:17:28.33:0,28,478	0/0:95,0:13:15.85:0,16,258	0/0:78,0:13:16.90:0,17,623	0/0:61,0:20:53.16:0,53,915	0/0:48,0:37:77.19:0,77,2000	0/0:30,0:18:32.98:0,33,506	0/0:37,0:3:6.02:0,6,133	0/1:5,1:4:0:0,0,0	1/1:45,0:20:13.31:146,13,0	0/0:7,0:2:6.02:0,6,124	0/0:7,0:2:3.48:0,3,37	0/0:35,0:22:22.74:0,23,394	0/0:14,0:4:9.01:0,9,107	0/0:68,0:15:30.12:0,30,796	0/1:5,4:5:17.31:212,0,17	0/0:4,0:1:3.01:0,3,81
chr10	103348159	.	A	AGAG	5743.67	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=3.013;DP=653;FS=22.127;HRun=0;HaplotypeScore=130.2777;InbreedingCoeff=0.9866;MQ=82.31;MQ0=0;MQRankSum=-4.989;QD=41.92;ReadPosRankSum=0.289;VQSLOD=4.3769;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:72.18:0,72,1064	0/0:8,0:8:21.07:0,21,343	0/0:25,0:25:57.50:0,57,879	0/0:16,0:16:44.88:0,45,641	0/0:15,0:15:24.01:0,24,354	0/0:17,0:17:33.11:0,33,536	0/0:27,0:27:42.11:0,42,631	1/1:2,24:28:78.17:1410,78,0	0/0:24,0:24:39.13:0,39,605	0/0:23,0:23:60.20:0,60,952	0/0:9,0:9:11.92:0,12,139	0/0:29,0:29:51.05:0,51,743	0/0:21,0:21:42.09:0,42,650	0/0:26,0:26:45.11:0,45,638	0/0:29,0:29:60.16:0,60,906	0/0:31,0:31:63.18:0,63,931	0/0:46,0:46:99:0,114,1729	0/0:25,0:25:48.09:0,48,727	1/1:5,14:19:51.08:926,51,0	1/1:2,18:20:33.32:682,33,0	1/1:3,39:44:74.85:1654,75,0	0/0:17,0:17:14.98:0,15,219	0/0:13,0:13:24.08:0,24,390	0/0:20,0:20:42.08:0,42,602	0/0:16,0:16:26.63:0,27,407	0/0:28,0:28:69.17:0,69,1043	1/1:3,23:25:47.90:1071,48,0	0/0:11,0:11:30.05:0,30,412
chr10	103349263	.	G	GTT	3168.74	PASS	AB=0.673;AC=28;AF=0.500;AN=56;BaseQRankSum=4.150;DP=643;FS=0.801;HRun=13;HaplotypeScore=97.3498;InbreedingCoeff=0.4486;MQ=73.80;MQ0=0;MQRankSum=-0.789;QD=7.56;ReadPosRankSum=-1.878;VQSLOD=0.9629;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,4:43:37.71:234,0,38	1/1:2,0:5:8:54,8,0	0/1:22,0:20:3.10:3,0,121	0/0:11,0:10:4.97:0,5,94	0/0:26,0:26:41.21:0,41,368	0/1:5,0:16:6.64:37,0,7	0/1:16,0:31:62.57:91,0,63	1/1:17,10:30:47.30:475,47,0	1/1:9,1:20:13.45:86,13,0	0/0:25,0:30:28.90:0,29,323	0/0:17,0:17:18.61:0,19,307	0/1:10,0:20:10.95:28,0,11	1/1:4,0:19:29.67:102,30,0	0/1:4,1:23:1.99:100,0,2	0/0:23,0:24:53.55:0,54,456	0/0:17,0:20:44.02:0,44,344	0/0:27,0:31:24.10:0,24,412	1/1:6,2:26:38.46:194,38,0	1/1:11,4:17:20.21:208,20,0	1/1:6,23:29:65.61:723,66,0	1/1:11,18:30:36.58:477,37,0	0/0:15,0:17:32.32:0,32,261	0/1:5,0:9:12.38:12,0,17	1/1:6,0:32:4.22:122,4,0	0/1:10,2:27:39.31:128,0,39	0/0:35,0:40:40.81:0,41,442	1/1:4,13:19:24.03:294,24,0	0/0:6,0:8:14.60:0,15,162
chr10	103349891	.	GCCTCTCTC	G	2118.11	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=2.297;DP=519;FS=5.045;HRun=0;HaplotypeScore=123.6744;InbreedingCoeff=0.6755;MQ=68.98;MQ0=11;MQRankSum=1.517;QD=16.29;ReadPosRankSum=-1.041;VQSLOD=2.3147;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:85.76:0,86,842	0/0:10,0:10:22.70:0,23,184	0/0:23,0:14:25.13:0,25,280	0/0:33,0:19:2.73:0,3,385	0/0:17,0:17:43.28:0,43,754	0/0:12,0:12:35.21:0,35,274	0/0:21,0:21:18.34:0,18,374	1/1:23,0:22:63.02:656,63,0	0/0:19,0:18:5.89:0,6,362	0/0:15,0:15:44.72:0,45,895	0/0:10,0:9:15.01:0,15,266	0/0:17,0:17:23.95:0,24,215	0/0:9,0:8:20.38:0,20,147	0/1:13,0:13:6.95:7,0,328	0/0:24,0:24:69.96:0,70,1510	0/0:19,0:19:56.12:0,56,1224	0/0:22,0:22:63.04:0,63,1547	0/0:21,0:21:5.01:0,5,569	1/1:1,0:24:71.88:723,72,0	1/1:0,9:9:12.04:230,12,0	1/1:27,0:27:53.64:581,54,0	0/0:13,0:13:24.03:0,24,711	0/0:9,0:9:23.90:0,24,210	0/1:17,0:17:29.65:30,0,105	0/0:7,0:7:14.98:0,15,137	0/0:24,0:24:69.07:0,69,1532	1/1:1,15:15:3.01:62,3,0	0/0:19,0:15:41.93:0,42,914
chr10	103349925	.	CTCTCTCTT	C	2586.54	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=1.438;DP=542;FS=14.277;HRun=0;HaplotypeScore=119.9999;InbreedingCoeff=0.4427;MQ=56.14;MQ0=23;MQRankSum=0.532;QD=8.80;ReadPosRankSum=-1.747;VQSLOD=0.6494;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:39:61.37:616,61,0	1/1:6,0:6:14.78:114,15,0	0/1:20,0:6:3.98:4,0,25	0/0:40,0:10:1.03:0,1,46	0/0:15,0:15:29.42:0,29,468	1/1:18,0:18:30.42:249,30,0	1/1:21,0:21:44.83:539,45,0	0/0:23,0:22:0.21:0,0,271	1/1:7,16:22:3.01:61,3,0	0/0:19,0:19:43.43:0,43,931	0/0:14,0:12:21:0,21,384	1/1:20,0:20:2.80:13,3,0	1/1:13,0:12:26.69:231,27,0	0/1:15,0:15:1.87:207,0,2	0/0:20,0:20:48.04:0,48,1284	0/0:20,0:20:52.69:0,53,1123	0/0:23,0:23:60.07:0,60,1653	0/1:18,0:18:89.50:294,0,90	0/1:15,0:14:80.03:80,0,106	0/1:17,0:17:74.83:75,0,129	0/1:24,0:24:81.36:81,0,188	0/0:16,0:16:42.08:0,42,903	1/1:9,0:8:8.99:74,9,0	1/1:1,27:28:3.01:81,3,0	1/1:6,0:6:7.36:56,7,0	0/0:22,0:21:54.14:0,54,1519	0/0:17,0:16:6.30:0,6,130	0/0:18,0:11:20.76:0,21,615
chr10	103349927	.	CTCTCTT	C	2169.86	PASS	AB=0.992;AC=27;AF=0.482;AN=56;BaseQRankSum=3.123;DP=544;FS=7.125;HRun=0;HaplotypeScore=108.5533;InbreedingCoeff=0.4932;MQ=57.21;MQ0=23;MQRankSum=0.527;QD=7.33;ReadPosRankSum=-2.392;VQSLOD=1.0893;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:37:60.63:476,61,0	1/1:6,0:6:10.56:110,11,0	0/1:23,0:9:5.65:6,0,32	0/0:40,0:9:1.01:0,1,46	0/0:15,0:15:29.42:0,29,405	1/1:18,0:18:32.45:254,32,0	1/1:21,0:21:48.85:388,49,0	0/0:22,0:22:2.21:0,2,247	1/1:23,0:22:3.01:47,3,0	0/0:19,0:19:26.97:0,27,716	0/0:14,0:12:21:0,21,331	1/1:1,18:19:3.01:56,3,0	1/1:14,0:13:28.28:212,28,0	1/1:15,0:15:32.56:267,33,0	0/0:21,0:21:53.97:0,54,1109	0/0:20,0:20:46.50:0,47,895	0/0:22,0:22:60.01:0,60,1297	0/1:19,0:19:81.78:220,0,82	0/1:15,0:14:67.34:67,0,106	0/1:19,0:19:26.75:27,0,152	0/1:24,0:24:39.51:40,0,189	0/0:17,0:17:44.94:0,45,759	1/1:8,0:7:8.87:74,9,0	1/1:27,0:27:3.01:49,3,0	1/1:6,0:6:11.28:74,11,0	0/0:22,0:21:53.97:0,54,1211	0/0:16,0:15:6.22:0,6,130	0/0:19,0:12:23.65:0,24,549
chr10	103350078	.	TTTC	T	7094.63	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=11.979;DP=540;FS=3.731;HRun=0;HaplotypeScore=90.2912;InbreedingCoeff=0.9738;MQ=67.03;MQ0=1;MQRankSum=-2.727;QD=21.43;ReadPosRankSum=0.864;VQSLOD=4.3040;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,26:34:51.16:694,51,0	1/1:0,7:7:18.06:259,18,0	0/0:21,0:13:18.04:0,18,266	0/0:24,0:22:39.13:0,39,734	0/0:21,0:21:54.17:0,54,981	1/1:5,16:20:42.14:574,42,0	1/1:9,23:32:39.13:543,39,0	1/1:20,0:18:18.04:214,18,0	1/1:3,18:21:39.13:539,39,0	0/0:17,0:17:42.14:0,42,836	0/0:8,0:8:15.05:0,15,280	1/1:5,15:17:24.08:331,24,0	1/1:6,5:11:21.07:302,21,0	1/1:2,20:22:39.13:534,39,0	0/0:25,0:25:57.17:0,57,1060	0/0:24,0:24:42.14:0,42,832	0/0:28,1:28:60.20:0,60,1161	1/1:8,4:10:15.05:210,15,0	1/1:9,0:9:6.02:83,6,0	1/1:16,0:16:33.11:448,33,0	1/1:24,0:18:24.08:336,24,0	0/0:11,0:11:22.88:0,23,391	1/1:2,13:15:24:315,24,0	1/1:13,25:36:66.19:880,66,0	1/1:5,9:14:27.09:389,27,0	0/0:22,0:22:48.16:0,48,896	1/1:15,0:13:33.10:445,33,0	0/0:6,0:6:18.06:0,18,354
chr10	103350093	.	CT	C	322.27	PASS	AB=0.784;AC=8;AF=0.143;AN=56;BaseQRankSum=5.041;DP=539;FS=2.308;HRun=2;HaplotypeScore=110.0668;InbreedingCoeff=0.3539;MQ=53.40;MQ0=6;MQRankSum=-1.313;QD=3.79;ReadPosRankSum=2.457;VQSLOD=0.7769;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:15.10:0,15,118	0/0:9,0:9:4.90:0,5,73	0/0:30,0:6:18.06:0,18,261	0/0:36,0:19:48.09:0,48,683	0/0:21,0:21:60.20:0,60,890	0/0:19,1:19:9.98:0,10,62	0/0:28,0:28:14.82:0,15,164	0/1:13,6:17:35.39:35,0,114	0/0:24,0:24:19.58:0,20,217	0/0:17,0:17:48.16:0,48,715	0/0:8,0:8:21.07:0,21,306	0/0:21,0:16:12.28:0,12,114	0/0:8,0:8:1.83:0,2,40	0/0:26,0:26:24.94:0,25,263	0/0:24,0:24:72.17:0,72,1001	0/0:22,0:22:60.18:0,60,835	0/0:27,0:26:75.25:0,75,1082	0/0:12,0:10:10.39:0,10,106	0/1:6,2:6:19.33:19,0,27	1/1:3,9:11:26.79:146,27,0	1/1:5,15:14:1.07:111,1,0	0/0:11,0:11:30.10:0,30,436	0/0:15,0:15:7.04:0,7,70	0/0:38,0:36:23.52:0,24,166	0/1:11,0:11:0:2,0,0	0/0:22,0:22:63.21:0,63,927	0/1:4,11:13:9.24:139,0,9	0/0:6,0:6:18.06:0,18,270
chr10	103350108	.	CGT	C	798.21	PASS	AB=0.982;AC=28;AF=0.583;AN=48;BaseQRankSum=-1.734;DP=531;FS=3.566;HRun=0;HaplotypeScore=116.3366;InbreedingCoeff=0.2601;MQ=48.81;MQ0=21;MQRankSum=0.812;QD=2.45;ReadPosRankSum=-3.174;VQSLOD=1.7403;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:29:0.18:0,0,29	1/1:9,0:10:11.09:61,11,0	./.	./.	1/1:19,0:19:5.46:25,5,0	0/1:21,1:21:40.02:40,0,57	0/0:24,0:24:3.01:0,3,36	./.	0/1:26,0:25:20.61:39,0,21	1/1:17,2:19:7.83:64,8,0	1/1:2,4:6:6.02:63,6,0	0/0:20,0:14:6.02:0,6,76	1/1:9,0:8:0.05:19,0,0	0/1:24,1:25:22.49:22,0,84	1/1:20,1:21:8.84:70,9,0	1/1:15,5:19:14.70:129,15,0	1/1:25,1:26:26.65:240,27,0	0/1:16,0:13:7.95:8,0,60	0/0:5,0:4:3.01:0,3,35	0/0:14,0:13:6.01:0,6,70	./.	1/1:10,0:9:5.84:39,6,0	0/0:13,0:13:9.02:0,9,98	0/1:33,1:31:2.06:2,0,87	0/0:10,0:10:3.01:0,3,37	1/1:24,2:24:9.02:95,9,0	0/0:12,0:10:3.01:0,3,40	1/1:4,1:4:3.01:32,3,0
chr10	103350155	.	GTGTGTGT	G	2437.08	PASS	AB=0.985;AC=34;AF=0.607;AN=56;BaseQRankSum=4.455;DP=506;FS=70.333;HRun=0;HaplotypeScore=127.3328;InbreedingCoeff=0.6356;MQ=45.70;MQ0=70;MQRankSum=-3.847;QD=7.39;ReadPosRankSum=-0.088;VQSLOD=-0.6727;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,1:24:9.57:337,0,10	1/1:4,2:4:6.02:144,6,0	0/0:22,0:9:25.31:0,25,297	0/0:26,0:12:29.90:0,30,323	0/0:14,0:16:1.46:0,1,157	1/1:16,1:12:6.02:110,6,0	1/1:21,0:12:10.26:135,10,0	1/1:28,0:27:48.02:523,48,0	1/1:22,1:16:11.97:168,12,0	0/0:10,0:9:21.07:0,21,363	0/0:10,0:10:13.29:0,13,198	1/1:21,0:13:3.92:73,4,0	1/1:8,0:5:8.62:90,9,0	1/1:21,1:14:9.03:153,9,0	0/0:15,0:15:35.99:0,36,562	0/0:19,0:18:33.05:0,33,456	0/0:32,0:31:54.34:0,54,923	1/1:9,11:14:6.02:144,6,0	1/1:4,0:3:3.01:38,3,0	1/1:8,0:8:0.63:1,1,0	1/1:20,0:8:4.77:31,5,0	0/1:9,0:8:27.98:28,0,140	1/1:18,0:13:9.02:102,9,0	1/1:51,0:29:30.56:389,31,0	1/1:8,0:4:5.92:58,6,0	0/0:18,0:18:33.11:0,33,525	1/1:13,0:11:14.31:108,14,0	0/0:6,0:5:9.03:0,9,168
chr10	103350161	.	GT	G	1589.66	PASS	AB=0.742;AC=16;AF=0.286;AN=56;BaseQRankSum=3.211;DP=481;FS=25.124;HRun=2;HaplotypeScore=88.4899;InbreedingCoeff=-0.2404;MQ=49.53;MQ0=70;MQRankSum=-4.112;QD=6.02;ReadPosRankSum=2.403;VQSLOD=-0.6629;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:17,15:23:46.06:316,0,46	0/1:5,1:4:4.07:20,0,4	0/0:28,0:14:41.79:0,42,488	0/0:35,0:21:56.92:0,57,666	0/0:11,0:11:14.94:0,15,191	0/1:9,4:8:33.53:34,0,93	0/1:13,9:12:48.57:168,0,49	0/1:16,12:27:40.30:478,0,40	0/1:11,8:11:38.53:76,0,39	0/0:12,0:11:28.47:0,28,336	0/0:11,0:11:21.13:0,21,221	0/1:10,5:9:62.95:63,0,75	0/1:4,4:4:18.64:64,0,19	0/0:12,6:10:1.91:0,2,104	0/0:14,0:13:32.54:0,33,379	0/0:20,0:18:38.82:0,39,403	0/0:28,3:31:34.54:0,35,701	0/1:16,3:13:13.29:13,0,54	0/1:3,1:3:29.12:29,0,49	0/0:6,2:8:5.84:0,6,82	1/1:14,3:7:3.59:10,4,0	0/0:9,0:8:17.74:0,18,175	0/1:10,7:12:57.81:64,0,58	0/1:16,30:24:8.21:291,0,8	0/1:4,4:4:29.48:51,0,29	0/0:13,1:14:36.48:0,36,421	0/1:9,1:9:29.72:68,0,30	0/0:6,0:5:11.56:0,12,108
chr10	103350178	.	T	TGAG	1158.35	PASS	AB=0.716;AC=5;AF=0.089;AN=56;BaseQRankSum=6.844;DP=444;FS=3.522;HRun=0;HaplotypeScore=90.8644;InbreedingCoeff=-0.1100;MQ=53.18;MQ0=51;MQRankSum=-6.824;QD=18.68;ReadPosRankSum=-1.052;VQSLOD=3.1768;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:21:61.09:0,61,1101	0/0:5,0:3:9.03:0,9,151	0/0:30,0:17:41.42:0,41,666	0/0:45,0:30:81.23:0,81,1430	0/0:8,0:8:17.92:0,18,305	0/0:11,0:6:15.03:0,15,224	0/0:20,0:12:33.11:0,33,578	0/1:17,6:25:99:415,0,428	0/0:15,0:8:20.99:0,21,315	0/0:11,0:11:33.11:0,33,615	0/0:10,0:10:27.09:0,27,502	0/0:9,0:4:12.04:0,12,223	0/0:12,0:9:21.07:0,21,360	0/0:12,0:6:8.52:0,9,120	0/0:16,0:15:45.15:0,45,828	0/0:16,0:16:48.16:0,48,891	0/0:28,0:28:81.28:0,81,1487	0/0:17,0:12:12.03:0,12,175	0/1:4,0:3:56.14:56,0,101	0/1:5,4:10:80.45:323,0,80	0/1:5,1:7:99:167,0,149	0/0:5,0:5:15.05:0,15,280	0/0:11,0:8:17.98:0,18,268	0/0:43,0:22:48.05:0,48,787	0/0:12,0:8:18.06:0,18,334	0/0:13,0:13:36.12:0,36,671	0/1:1,8:10:26.24:314,0,26	0/0:4,0:4:9.03:0,9,150
chr10	103350326	.	TTTTTTTTTTG	T	1154.16	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=6.681;DP=359;FS=2.359;HRun=0;HaplotypeScore=106.5954;InbreedingCoeff=0.1164;MQ=66.96;MQ0=10;MQRankSum=-5.039;QD=7.85;ReadPosRankSum=4.079;VQSLOD=1.8377;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:21:89.75:90,0,245	0/0:9,0:9:18.43:0,18,212	0/0:32,0:10:15.31:0,15,251	0/0:20,0:11:17.12:0,17,159	0/0:14,0:14:32.98:0,33,1157	0/1:13,0:13:99:120,0,251	0/1:12,0:11:58.68:59,0,123	1/1:10,2:10:8.25:238,8,0	0/0:5,0:5:6.20:0,6,47	0/0:13,0:12:32.14:0,32,931	0/0:9,0:9:27.08:0,27,859	0/1:14,0:13:31.77:32,0,50	0/1:5,0:4:22.66:66,0,23	0/0:4,0:4:8.76:0,9,58	0/0:9,0:9:21:0,21,653	0/0:13,0:13:29.77:0,30,935	0/0:37,0:34:78.60:0,79,2750	0/1:18,0:15:80.47:80,0,216	1/1:10,1:9:9.91:220,10,0	1/1:7,3:9:2.93:209,3,0	0/1:8,0:8:18.14:23,0,18	0/0:4,0:4:9.02:0,9,174	0/0:8,0:8:10.47:0,10,104	0/1:12,0:12:98.81:99,0,166	0/1:7,0:7:10.56:69,0,11	0/0:24,0:23:45.15:0,45,1830	1/1:3,0:2:2.86:16,3,0	0/0:11,0:10:22.32:0,22,799
chr10	103350335	.	TG	T	776.08	PASS	AB=0.983;AC=26;AF=0.464;AN=56;BaseQRankSum=7.055;DP=359;FS=3.814;HRun=1;HaplotypeScore=62.7565;InbreedingCoeff=0.0567;MQ=62.90;MQ0=12;MQRankSum=-6.367;QD=3.63;ReadPosRankSum=-0.794;VQSLOD=-0.0983;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:28:49.90:150,0,50	0/1:9,0:9:11.08:11,0,63	0/1:32,1:9:2.96:3,0,66	0/0:19,1:10:14.01:0,14,65	0/0:14,0:14:18.58:0,19,206	0/1:12,2:13:81.37:81,0,99	0/1:11,0:10:12.08:48,0,12	1/1:12,0:10:5.40:82,5,0	0/1:5,0:5:10.61:11,0,18	0/0:14,0:13:12.97:0,13,221	0/0:9,0:9:14:0,14,185	0/0:11,0:11:1.64:0,2,42	0/1:6,0:5:1.96:34,0,2	0/1:5,0:5:25.37:25,0,30	0/0:7,0:7:5.80:0,6,90	0/0:14,0:14:8.22:0,8,184	0/0:37,1:35:0.72:0,1,320	0/1:17,1:15:32.25:113,0,32	1/1:9,0:7:7.82:74,8,0	1/1:7,0:7:6.56:37,7,0	1/1:9,0:9:11:87,11,0	0/1:5,0:5:5.89:6,0,34	1/1:9,0:9:16.44:78,16,0	0/1:13,0:13:19.51:20,0,53	1/1:5,0:5:11.27:56,11,0	0/0:18,0:17:29.76:0,30,290	1/1:3,0:2:2.98:21,3,0	0/1:11,0:10:10.42:10,0,143
chr10	103350339	.	TTTTTTGTTC	T	3184.54	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=4.286;DP=348;FS=3.349;HRun=0;HaplotypeScore=93.5569;InbreedingCoeff=0.7431;MQ=60.20;MQ0=14;MQRankSum=-4.184;QD=18.96;ReadPosRankSum=-3.240;VQSLOD=1.5456;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,5:27:65.86:845,66,0	1/1:3,5:8:2.97:20,3,0	0/0:29,0:7:11.50:0,12,159	0/0:19,0:9:9.60:0,10,44	0/0:14,0:14:32.80:0,33,966	1/1:14,1:14:23.38:390,23,0	1/1:8,3:9:18.39:258,18,0	1/1:13,0:10:10.74:126,11,0	1/1:4,0:4:5.97:59,6,0	0/0:13,0:12:24.07:0,24,760	0/0:9,0:9:6.07:0,6,570	1/1:1,10:11:3.01:86,3,0	1/1:5,1:5:14.97:235,15,0	1/1:4,0:4:5.99:61,6,0	0/0:8,0:8:18.04:0,18,542	0/0:15,0:15:17.24:0,17,883	0/0:38,0:35:66.43:0,66,2441	1/1:17,1:15:34.32:431,34,0	1/1:9,0:7:6.49:119,6,0	1/1:6,0:5:8.98:117,9,0	1/1:10,0:10:3.53:27,4,0	0/0:6,0:5:8.92:0,9,200	1/1:6,0:6:14.65:101,15,0	1/1:9,2:11:4.34:285,4,0	1/1:3,2:5:12:219,12,0	0/0:19,0:18:48.01:0,48,1650	0/1:3,0:3:9.35:9,0,14	0/0:10,0:9:24.01:0,24,647
chr10	103350447	.	GT	G	2734.41	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=5.831;DP=492;FS=2.490;HRun=10;HaplotypeScore=64.4696;InbreedingCoeff=0.8837;MQ=64.59;MQ0=13;MQRankSum=1.373;QD=12.66;ReadPosRankSum=2.230;VQSLOD=3.5877;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,34:36:77.97:677,78,0	1/1:1,5:6:15:130,15,0	0/0:33,0:15:21.86:0,22,201	0/1:42,0:18:27.04:27,0,107	0/0:20,2:22:34.10:0,34,601	1/1:3,14:17:32.99:286,33,0	1/1:1,13:14:29.94:260,30,0	0/0:19,1:18:39.11:0,39,431	1/1:1,6:7:15:130,15,0	0/0:13,0:12:33.09:0,33,365	0/0:15,0:15:42.11:0,42,463	1/1:1,3:4:6:52,6,0	1/1:5,10:15:17.98:156,18,0	1/1:0,4:3:6:52,6,0	0/0:11,0:11:27.05:0,27,289	0/0:12,0:12:33.06:0,33,353	0/0:44,1:44:85.71:0,86,1145	1/1:2,19:21:41.98:364,42,0	0/0:29,0:26:60.12:0,60,649	0/0:18,0:18:41.46:0,41,426	0/0:9,0:7:14.71:0,15,144	0/0:5,0:5:12.03:0,12,133	1/1:5,16:21:40.59:362,41,0	1/1:4,9:13:23.99:208,24,0	1/1:3,12:15:29.89:251,30,0	0/0:12,0:12:27.07:0,27,297	0/0:19,0:17:39.11:0,39,431	0/0:12,0:11:17.36:0,17,245
chr10	103350549	.	A	AT	4529.91	PASS	AB=0.571;AC=33;AF=0.589;AN=56;BaseQRankSum=-3.743;DP=378;FS=12.356;HRun=9;HaplotypeScore=49.5302;InbreedingCoeff=0.8415;MQ=71.13;MQ0=2;MQRankSum=-2.929;QD=22.88;ReadPosRankSum=0.999;VQSLOD=4.8273;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,18:23:37.11:637,37,0	1/1:0,2:2:6.02:66,6,0	0/0:25,0:17:37.12:0,37,309	0/0:22,0:16:7.85:0,8,190	0/0:13,0:13:32.98:0,33,284	1/1:2,14:15:36.09:394,36,0	1/1:1,12:13:30.08:330,30,0	1/1:4,10:13:35.85:352,36,0	1/1:0,14:14:36.08:389,36,0	0/0:20,0:20:47.97:0,48,416	0/0:18,0:18:47.90:0,48,394	1/1:1,7:8:18.05:195,18,0	1/1:2,6:8:19.60:203,20,0	0/1:2,6:8:4.02:118,0,4	0/0:14,0:14:35.97:0,36,311	0/0:13,0:13:35.99:0,36,311	0/0:28,0:28:77.93:0,78,664	1/1:2,11:13:27.07:299,27,0	1/1:5,8:11:24.06:265,24,0	1/1:4,5:9:21.01:210,21,0	1/1:6,2:7:5.05:39,5,0	0/0:11,0:11:29.99:0,30,260	1/1:2,12:14:21.06:232,21,0	1/1:0,12:12:30.08:332,30,0	1/1:0,8:8:24.06:265,24,0	0/0:15,0:15:41.99:0,42,364	1/1:4,8:11:0.55:203,1,0	0/0:1,0:1:3:0,3,26
chr10	103350564	.	A	AT	1421.66	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=3.858;DP=386;FS=9.537;HRun=8;HaplotypeScore=62.5763;InbreedingCoeff=0.9271;MQ=76.49;MQ0=0;MQRankSum=-4.985;QD=22.57;ReadPosRankSum=-3.722;VQSLOD=2.3388;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:68.99:0,69,631	0/0:2,0:2:6:0,6,55	0/0:17,0:15:27.29:0,27,193	0/0:20,0:20:32.68:0,33,242	0/0:12,0:12:27.01:0,27,247	0/0:16,0:15:39.02:0,39,356	0/0:13,0:13:29.99:0,30,269	1/1:5,12:16:36.10:408,36,0	0/0:16,0:16:39.02:0,39,356	0/0:21,0:21:60.03:0,60,549	0/0:18,0:18:48.02:0,48,439	0/0:7,0:7:17.99:0,18,159	0/0:10,0:10:24:0,24,219	0/0:8,0:8:15:0,15,137	0/0:11,0:11:30:0,30,270	0/0:13,0:13:36.01:0,36,329	0/0:29,0:29:77.94:0,78,697	0/0:13,0:13:35.98:0,36,317	1/1:5,9:13:30.06:325,30,0	1/1:2,8:10:27.07:302,27,0	1/1:1,6:6:16.60:177,17,0	0/0:14,0:14:33:0,33,297	0/0:13,0:13:24.01:0,24,220	0/0:12,0:12:24.01:0,24,220	0/0:13,0:12:33.02:0,33,302	0/0:16,0:16:45.02:0,45,412	1/1:4,11:13:33.98:382,34,0	0/0:1,0:1:3:0,3,27
chr10	103350770	.	TC	T	4968.60	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=20.205;DP=669;FS=0.000;HRun=1;HaplotypeScore=138.3384;InbreedingCoeff=0.9991;MQ=78.23;MQ0=0;MQRankSum=-7.905;QD=19.48;ReadPosRankSum=2.537;VQSLOD=5.0761;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,7:44:99:915,108,0	1/1:6,2:8:19.35:138,19,0	0/0:27,0:27:77.85:0,78,1170	0/0:22,0:21:63.11:0,63,895	0/0:27,0:27:78.24:0,78,1199	1/1:18,3:20:58.48:515,58,0	1/1:9,17:26:64.91:376,65,0	0/0:32,0:32:93.30:0,93,1443	1/1:19,2:21:46.10:461,46,0	0/0:33,0:33:96.33:0,96,1529	0/0:24,0:24:63.21:0,63,1007	1/1:17,7:24:63.60:503,64,0	1/1:13,7:20:36.44:341,36,0	1/1:9,2:11:31.40:258,31,0	0/0:39,0:39:99:0,117,1843	0/0:26,0:25:78.25:0,78,1224	0/0:28,0:28:81.28:0,81,1295	1/1:14,5:19:43.16:330,43,0	0/0:21,0:21:63.21:0,63,1008	0/0:17,0:17:45.15:0,45,719	0/0:40,0:40:99:0,120,1894	0/0:19,0:19:57.19:0,57,901	1/1:12,5:17:40.20:304,40,0	1/1:28,3:31:64.67:542,65,0	1/1:9,4:13:35.83:285,36,0	0/0:21,0:21:63.21:0,63,985	0/0:20,0:20:57.19:0,57,911	0/0:18,0:18:54.18:0,54,862
chr10	103350773	.	C	CA	6411.06	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=19.923;DP=669;FS=1.699;HRun=0;HaplotypeScore=132.8426;InbreedingCoeff=0.9993;MQ=79.78;MQ0=0;MQRankSum=-4.313;QD=25.34;ReadPosRankSum=2.979;VQSLOD=5.3900;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:36,7:43:99:1154,113,0	1/1:6,2:8:20.62:179,21,0	0/0:28,0:28:80.44:0,80,1033	0/0:22,0:21:60.08:0,60,755	0/0:27,0:27:78.26:0,78,1089	1/1:16,3:18:53.72:540,54,0	1/1:9,17:26:71.86:519,72,0	0/0:32,0:32:93.28:0,93,1241	1/1:18,2:20:59.67:589,60,0	0/0:34,0:34:99:0,99,1380	0/0:24,0:24:63.21:0,63,881	1/1:16,7:23:67.51:635,68,0	1/1:14,7:21:53.59:510,54,0	1/1:10,2:12:35.64:346,36,0	0/0:39,0:39:99:0,114,1593	0/0:26,0:24:75.25:0,75,1049	0/0:29,0:29:81.19:0,81,1089	1/1:15,5:20:44.61:419,45,0	0/0:20,0:20:60.20:0,60,839	0/0:18,0:18:42.14:0,42,587	0/0:40,0:40:99:0,120,1660	0/0:19,0:19:54.18:0,54,755	1/1:12,5:17:44.40:421,44,0	1/1:29,3:32:74.49:781,74,0	1/1:8,4:12:35.23:319,35,0	0/0:20,0:20:60.19:0,60,824	0/0:20,0:20:57.19:0,57,797	0/0:18,0:18:54.14:0,54,731
chr10	103351503	.	C	CTTT	4659.48	PASS	AB=0.983;AC=27;AF=0.482;AN=56;BaseQRankSum=-6.405;DP=476;FS=0.000;HRun=12;HaplotypeScore=78.0241;InbreedingCoeff=0.7437;MQ=72.09;MQ0=1;MQRankSum=-1.628;QD=17.92;ReadPosRankSum=-2.025;VQSLOD=3.0327;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,16:23:27.09:488,27,0	1/1:4,3:7:15.02:229,15,0	0/1:13,0:12:11.51:12,0,26	0/0:11,0:12:13.02:0,13,132	0/0:12,0:11:4.43:0,4,139	1/1:3,15:19:22.61:357,23,0	1/1:6,10:16:21.07:386,21,0	0/1:8,0:33:19.32:19,0,291	1/1:3,7:8:6.02:110,6,0	0/0:14,0:15:27.72:0,28,323	0/0:10,0:11:25.54:0,26,298	1/1:5,11:17:24.08:438,24,0	1/1:9,4:9:18.04:245,18,0	1/1:0,11:11:6.02:110,6,0	0/0:15,0:15:39.08:0,39,437	0/0:12,0:12:26.79:0,27,273	0/0:22,0:25:47.21:0,47,485	1/1:4,19:25:51.17:908,51,0	0/0:7,0:24:25.78:0,26,210	0/0:3,0:22:49.36:0,49,292	0/0:7,0:28:35.63:0,36,252	0/0:12,0:14:23.75:0,24,221	1/1:3,7:10:9.03:165,9,0	1/1:3,13:17:30.06:493,30,0	1/1:6,13:19:39.13:695,39,0	0/1:18,0:19:4.71:5,0,186	0/0:3,0:13:23.49:0,23,142	0/0:12,0:12:30.03:0,30,336
chr10	103353051	.	T	TC	1169.32	PASS	AC=20;AF=0.455;AN=44;BaseQRankSum=-0.652;DP=437;FS=0.000;HRun=7;HaplotypeScore=41.7791;InbreedingCoeff=0.7826;MQ=23.08;MQ0=208;MQRankSum=-2.172;QD=7.13;ReadPosRankSum=0.703;VQSLOD=-0.4581;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,19:5:6.02:72,6,0	1/1:1,8:6:15.05:181,15,0	./.	./.	0/0:14,0:14:12.01:0,12,116	./.	1/1:5,13:3:5.98:56,6,0	./.	1/1:1,15:11:15.05:181,15,0	0/0:19,0:17:39:0,39,367	0/0:12,0:7:9.01:0,9,87	1/1:3,17:14:18.06:217,18,0	1/1:4,13:11:12.04:145,12,0	1/1:3,18:15:15.04:181,15,0	0/0:17,0:9:12.02:0,12,116	0/0:13,0:9:15:0,15,145	0/0:16,0:2:3:0,3,29	./.	0/0:23,0:12:33.05:0,33,319	0/0:16,0:12:33.05:0,33,317	./.	0/0:10,0:8:3:0,3,29	1/1:2,8:8:8.82:108,9,0	1/1:4,11:6:3.01:36,3,0	1/1:2,11:11:15:165,15,0	0/0:27,0:17:42.06:0,42,405	0/0:12,0:7:6.01:0,6,58	0/0:5,0:3:6.01:0,6,58
chr10	103369313	.	GA	G	3491.56	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.450;DP=655;FS=0.396;HRun=4;HaplotypeScore=76.2434;InbreedingCoeff=0.9996;MQ=83.04;MQ0=0;MQRankSum=0.717;QD=30.36;ReadPosRankSum=-1.063;VQSLOD=3.3343;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1444	0/0:10,0:10:30.07:0,30,385	0/0:27,0:26:70.39:0,70,823	0/0:25,0:25:62.37:0,62,664	0/0:27,0:27:81.24:0,81,1093	0/0:15,0:15:42.14:0,42,587	0/0:23,0:23:69.16:0,69,879	1/1:0,31:31:84.13:918,84,0	0/0:18,0:18:54.11:0,54,670	0/0:30,0:30:84.28:0,84,1170	0/0:11,0:11:27.08:0,27,362	0/0:29,0:29:84.27:0,84,1147	0/0:18,0:18:51.16:0,51,695	0/0:26,0:26:78.23:0,78,1036	0/0:24,0:24:72.18:0,72,922	0/0:28,0:28:84.28:0,84,1171	0/0:37,0:37:99:0,108,1422	0/0:24,0:24:72.19:0,72,962	1/1:0,15:15:45.08:509,45,0	1/1:0,13:13:36.07:411,36,0	1/1:0,22:22:51.16:611,51,0	0/0:21,0:21:63.16:0,63,857	0/0:22,0:22:66.08:0,66,811	0/0:22,0:22:66.13:0,66,820	0/0:25,0:25:75.19:0,75,965	0/0:23,0:23:66.22:0,66,919	1/1:4,30:34:87.27:1042,87,0	0/0:15,0:15:45.12:0,45,584
chr10	103370115	.	CA	C	15428.37	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=11.309;DP=671;FS=0.000;HRun=1;HaplotypeScore=72.3440;InbreedingCoeff=0.9984;MQ=86.03;MQ0=0;MQRankSum=-2.942;QD=38.86;ReadPosRankSum=0.704;VQSLOD=5.3312;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:44:99:1759,126,0	1/1:0,6:6:18.06:252,18,0	0/0:26,0:26:74.46:0,74,1120	0/0:20,0:20:38.21:0,38,704	0/0:17,0:17:48.16:0,48,760	1/1:0,20:20:60.20:838,60,0	1/1:0,26:26:75.25:1048,75,0	1/1:0,30:29:84.25:1136,84,0	1/1:0,18:18:51.17:713,51,0	0/0:28,0:28:84.28:0,84,1324	0/0:21,0:21:63.19:0,63,959	1/1:0,26:26:66.22:922,66,0	1/1:0,13:13:36.12:501,36,0	1/1:0,17:17:45.15:629,45,0	0/0:39,0:39:99:0,117,1796	0/0:20,1:21:22.25:0,22,918	0/0:31,0:31:93.23:0,93,1379	1/1:0,26:26:69.23:965,69,0	1/1:4,21:25:75.21:1007,75,0	1/1:1,24:25:72.24:994,72,0	1/1:2,23:25:69.23:962,69,0	0/0:20,0:20:60.20:0,60,959	1/1:0,20:20:51.17:712,51,0	1/1:0,28:28:81.27:1131,81,0	1/1:0,23:23:60.20:839,60,0	0/0:28,0:28:84.29:0,84,1342	1/1:2,23:25:75.24:1022,75,0	0/0:23,0:23:69.24:0,69,1103
chr10	103370183	.	CA	C	4645.16	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.108;DP=783;FS=7.843;HRun=2;HaplotypeScore=89.4617;InbreedingCoeff=0.9990;MQ=68.03;MQ0=0;MQRankSum=-6.720;QD=34.93;ReadPosRankSum=-2.787;VQSLOD=3.5830;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,2089	0/0:7,0:7:21.07:0,21,314	0/0:24,0:24:59.81:0,60,790	0/0:27,0:27:75.07:0,75,1005	0/0:20,0:20:60.20:0,60,899	0/0:23,0:23:69.22:0,69,1006	0/0:29,0:29:84.26:0,84,1235	1/1:1,27:28:81.24:1024,81,0	0/0:34,0:34:99:0,102,1508	0/0:31,0:31:93.32:0,93,1394	0/0:28,0:28:81.27:0,81,1214	0/0:29,0:29:78.25:0,78,1148	0/0:20,0:20:57.18:0,57,834	0/0:20,0:20:57.18:0,57,820	0/0:43,0:43:99:0,129,1932	0/0:28,0:28:84.28:0,84,1259	0/0:40,0:40:99:0,120,1746	0/0:19,0:19:57.19:0,57,854	1/1:2,24:26:72.23:935,72,0	1/1:0,28:28:69.22:895,69,0	1/1:0,22:22:57.19:740,57,0	0/0:32,0:32:96.27:0,96,1395	0/0:17,0:17:42.14:0,42,628	0/0:46,0:46:99:0,135,2023	0/0:24,0:24:69.23:0,69,1033	0/0:36,0:36:99:0,108,1618	1/1:0,29:29:81.26:1052,81,0	0/0:24,0:24:72.23:0,72,1060
chr10	103370503	.	T	TC	239.25	PASS	AB=0.793;AC=2;AF=0.036;AN=56;BaseQRankSum=4.199;DP=693;FS=4.238;HRun=2;HaplotypeScore=73.8424;InbreedingCoeff=-0.0380;MQ=69.52;MQ0=0;MQRankSum=-4.365;QD=4.88;ReadPosRankSum=-1.892;VQSLOD=0.0154;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,1696	0/0:5,0:5:15.05:0,15,183	0/1:17,8:23:99:256,0,216	0/1:19,5:24:72.51:73,0,510	0/0:12,0:12:30.09:0,30,371	0/0:20,0:20:54.17:0,54,670	0/0:25,0:25:75.24:0,75,929	0/0:36,0:36:93.29:0,93,1153	0/0:32,0:32:96.29:0,96,1174	0/0:26,0:26:69.21:0,69,846	0/0:10,0:10:30.09:0,30,372	0/0:25,0:25:75.24:0,75,930	0/0:21,0:21:63.20:0,63,781	0/0:22,0:22:63.20:0,63,781	0/0:31,0:31:87.27:0,87,1079	0/0:28,0:28:81.22:0,81,967	0/0:28,0:28:84.24:0,84,1026	0/0:27,0:27:75.23:0,75,928	0/0:27,1:28:38.01:0,38,884	0/0:16,0:16:36.11:0,36,446	0/0:41,0:41:99:0,114,1413	0/0:17,0:17:48.14:0,48,583	0/0:6,0:6:18.06:0,18,223	0/0:47,0:47:99:0,132,1604	0/0:13,0:13:39.12:0,39,483	0/0:35,0:35:87.27:0,87,1078	0/0:34,0:34:99:0,99,1223	0/0:11,0:11:33.10:0,33,409
chr10	103370695	.	TG	T	2487.07	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.996;DP=313;FS=25.225;HRun=1;HaplotypeScore=34.0562;InbreedingCoeff=0.9493;MQ=75.38;MQ0=0;MQRankSum=0.001;QD=35.53;ReadPosRankSum=-1.101;VQSLOD=1.3760;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:42.14:0,42,671	0/0:7,0:7:21.07:0,21,326	0/0:8,0:8:21.04:0,21,308	0/0:5,0:5:5.94:0,6,96	0/0:7,0:7:21.07:0,21,336	0/0:10,0:10:30.10:0,30,480	0/0:17,0:17:51.17:0,51,815	1/1:0,20:20:60.19:816,60,0	0/0:7,0:7:21.07:0,21,336	0/0:5,0:5:15.05:0,15,240	0/0:9,0:9:27.09:0,27,432	0/0:16,0:16:48.16:0,48,767	0/0:13,0:13:39.12:0,39,600	0/0:10,0:10:30.10:0,30,477	0/0:16,0:16:48.16:0,48,767	0/0:12,0:12:36.11:0,36,550	0/0:25,0:24:75.26:0,75,1193	0/0:15,0:15:45.15:0,45,719	1/1:0,12:12:36.12:503,36,0	1/1:0,9:9:21.07:294,21,0	1/1:0,14:14:36.12:504,36,0	0/0:6,0:6:15.05:0,15,240	0/0:3,0:3:9.03:0,9,144	0/0:10,0:10:30.10:0,30,478	0/0:7,0:7:21.07:0,21,336	0/0:12,0:12:33.11:0,33,526	1/1:0,15:15:39.13:545,39,0	0/0:9,0:9:27.09:0,27,432
chr10	103370759	.	G	GCGCGA	2350.14	PASS	AB=1.000;AC=27;AF=0.563;AN=48;BaseQRankSum=-0.854;DP=163;FS=5.742;HRun=0;HaplotypeScore=46.5507;InbreedingCoeff=0.7187;MQ=87.65;MQ0=1;MQRankSum=-6.802;QD=29.75;ReadPosRankSum=0.231;VQSLOD=2.3181;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:9.01:132,9,0	1/1:2,0:2:2.97:20,3,0	0/0:17,0:12:32.80:0,33,503	0/0:12,0:8:23.99:0,24,325	0/0:4,0:4:3.01:0,3,57	1/1:5,0:5:12.04:232,12,0	1/1:11,2:14:30.10:555,30,0	./.	1/1:3,3:6:15.03:325,15,0	0/1:2,0:2:0:0,0,0	0/0:3,0:3:6.02:0,6,89	1/1:2,2:5:6.02:161,6,0	1/1:2,4:6:9.03:203,9,0	1/1:5,3:9:12.04:250,12,0	0/0:10,0:9:15.05:0,15,234	0/0:5,0:5:15.02:0,15,212	0/0:20,0:20:34.87:0,35,494	1/1:4,1:5:12.04:244,12,0	./.	./.	./.	0/0:2,0:2:3.01:0,3,58	1/1:3,0:3:6:86,6,0	1/1:1,4:5:6.02:133,6,0	1/1:1,3:7:3.01:79,3,0	0/0:4,0:4:6.02:0,6,94	1/1:5,0:5:11.61:104,12,0	0/0:3,0:3:9.03:0,9,176
chr10	103370765	.	C	CG	413.57	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=6.615;DP=214;FS=2.184;HRun=0;HaplotypeScore=61.7390;InbreedingCoeff=0.6479;MQ=88.35;MQ0=1;MQRankSum=-5.625;QD=9.19;ReadPosRankSum=0.352;VQSLOD=3.3730;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:12.04:0,12,150	0/0:3,0:3:3.01:0,3,42	0/0:19,0:15:39.37:0,39,468	0/0:14,0:10:26.21:0,26,352	0/0:6,0:6:9.03:0,9,124	0/0:4,0:4:12.04:0,12,166	0/0:10,0:10:30.05:0,30,380	1/1:6,1:7:17.53:178,18,0	0/0:7,0:7:20.93:0,21,252	0/0:5,0:5:11.40:0,11,129	0/0:2,0:2:6.02:0,6,84	0/0:3,0:3:6.02:0,6,72	0/0:5,0:5:12.04:0,12,164	0/0:11,0:11:20.96:0,21,211	0/0:11,0:11:24.08:0,24,335	0/0:8,0:8:24.07:0,24,319	0/0:19,0:19:51.17:0,51,713	0/0:5,0:5:15.05:0,15,206	1/1:4,0:4:8.76:85,9,0	0/1:4,0:4:0:0,0,0	1/1:14,2:16:3.01:37,3,0	0/0:3,0:3:6.02:0,6,84	0/0:4,0:4:9.03:0,9,126	0/0:7,0:7:5.51:0,6,51	0/0:7,0:7:2.38:0,2,19	0/0:6,0:6:9.03:0,9,125	1/1:10,4:14:23.74:254,24,0	0/0:3,0:3:9.03:0,9,126
chr10	103371931	.	GT	G	3761.86	PASS	AB=0.538;AC=9;AF=0.161;AN=56;BaseQRankSum=13.357;DP=686;FS=2.810;HRun=4;HaplotypeScore=90.6590;InbreedingCoeff=0.9128;MQ=76.70;MQ0=0;MQRankSum=-1.582;QD=28.94;ReadPosRankSum=-2.343;VQSLOD=2.3858;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,1929	0/0:8,0:8:24.08:0,24,336	0/0:14,0:14:30.09:0,30,399	0/0:14,0:15:32.78:0,33,378	0/0:16,0:16:48.16:0,48,671	0/0:21,0:21:60.20:0,60,839	0/0:38,0:38:99:0,111,1555	1/1:5,21:26:63.19:756,63,0	0/0:25,0:25:72.24:0,72,1006	0/0:30,0:30:81.25:0,81,1093	0/0:8,0:8:18.06:0,18,252	0/0:26,0:26:75.24:0,75,1035	0/0:29,0:29:81.26:0,81,1118	0/0:30,0:30:90.30:0,90,1255	0/0:26,0:26:75.22:0,75,1015	0/0:25,0:25:75.25:0,75,1050	0/0:42,0:42:99:0,126,1707	0/0:24,0:24:72.24:0,72,1008	1/1:6,12:18:36.11:430,36,0	0/1:2,12:14:2.79:382,0,3	1/1:4,53:57:99:1653,138,0	0/0:27,0:27:81.27:0,81,1132	0/0:12,0:12:30.10:0,30,418	0/0:44,0:44:99:0,129,1797	0/0:10,0:10:30.10:0,30,420	0/0:29,0:29:81.27:0,81,1133	1/1:0,15:15:45.14:540,45,0	0/0:9,0:9:27.09:0,27,378
chr10	103372257	.	ACTGTCAGCAAGCC	A	569.17	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=2.900;DP=386;FS=0.000;HRun=0;HaplotypeScore=138.0549;InbreedingCoeff=0.8270;MQ=87.56;MQ0=0;MQRankSum=-2.648;QD=28.46;ReadPosRankSum=-2.961;VQSLOD=2.4590;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.15:0,48,2296	0/0:3,0:3:6.02:0,6,321	0/0:15,0:15:42.14:0,42,2112	0/0:15,0:14:32.98:0,33,1393	0/0:11,0:11:33.08:0,33,1161	0/0:15,0:15:45.15:0,45,2511	0/0:23,0:23:66.65:0,67,3150	1/1:6,0:6:9.02:111,9,0	0/0:21,0:21:57.18:0,57,2765	0/0:32,0:32:87.18:0,87,4848	0/0:6,0:6:15.05:0,15,989	0/0:13,0:13:36.07:0,36,1215	0/0:18,0:18:48.16:0,48,2650	0/0:19,0:19:57.18:0,57,3040	0/0:24,0:24:72.25:0,72,4165	0/0:14,0:14:39.13:0,39,2181	0/0:31,0:31:90.27:0,90,5030	0/0:15,0:15:45.01:0,45,1989	1/1:2,4:6:11.77:141,12,0	1/1:0,4:4:8.99:249,9,0	0/0:1,17:18:0.47:0,0,1	0/0:12,0:12:36.09:0,36,1891	0/0:2,0:2:3:0,3,25	0/0:12,0:12:30.10:0,30,1697	0/0:9,0:9:24.08:0,24,1380	0/0:14,0:14:42.13:0,42,2224	1/1:3,1:4:9.03:209,9,0	0/0:6,0:6:18.06:0,18,1061
chr10	103372286	.	CCT	C	2297.50	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-0.877;DP=342;FS=67.774;HRun=0;HaplotypeScore=50.3698;InbreedingCoeff=0.8646;MQ=79.12;MQ0=0;MQRankSum=-1.646;QD=13.51;ReadPosRankSum=-9.090;VQSLOD=-0.6287;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,1:18:17.94:149,18,0	1/1:2,0:2:5.83:34,6,0	0/0:8,0:8:23.83:0,24,210	0/0:16,0:15:27.32:0,27,261	0/0:9,0:9:24.07:0,24,388	1/1:5,0:5:15:130,15,0	1/1:26,0:26:61.94:469,62,0	1/1:3,1:4:2.96:19,3,0	1/1:12,1:13:17.03:209,17,0	0/0:33,0:33:81.16:0,81,1180	0/0:6,0:6:15.05:0,15,233	1/1:13,1:14:20.77:186,21,0	1/1:15,1:16:38.75:351,39,0	1/1:12,0:12:32.92:274,33,0	0/0:26,0:26:75.21:0,75,1152	0/0:17,0:17:51.09:0,51,744	0/0:28,0:28:78.06:0,78,1202	1/1:16,1:17:33.40:275,33,0	1/1:2,0:2:2.60:10,3,0	1/1:5,0:5:8.38:48,8,0	1/1:13,0:13:3:26,3,0	0/0:11,0:11:33.10:0,33,486	1/1:4,0:4:8.74:57,9,0	1/1:6,0:6:14.99:128,15,0	1/1:5,0:5:8.99:76,9,0	0/0:14,0:14:36.12:0,36,553	1/1:6,2:8:10.28:72,10,0	0/0:4,0:4:12.04:0,12,152
chr10	103372287	.	CT	C	2440.76	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-0.176;DP=345;FS=62.918;HRun=1;HaplotypeScore=46.4410;InbreedingCoeff=0.8638;MQ=77.99;MQ0=0;MQRankSum=-3.729;QD=14.19;ReadPosRankSum=-8.890;VQSLOD=-0.5539;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,1:17:18.44:150,18,0	1/1:2,0:2:5.83:34,6,0	0/0:9,0:9:18.70:0,19,184	0/0:15,0:14:12.15:0,12,178	0/0:8,0:8:24.08:0,24,299	1/1:5,0:5:15:130,15,0	1/1:22,4:26:63.06:516,63,0	1/1:5,0:5:2.94:19,3,0	1/1:11,2:13:25.19:200,25,0	0/0:33,0:33:81.03:0,81,940	0/0:6,0:6:15.02:0,15,173	1/1:13,1:14:23.19:188,23,0	1/1:17,0:17:44.88:371,45,0	1/1:12,0:12:32.93:275,33,0	0/0:25,0:25:75.10:0,75,883	0/0:19,0:19:54.05:0,54,609	0/0:29,0:29:80.71:0,81,932	1/1:15,3:18:33.41:289,33,0	1/1:2,0:2:2.60:10,3,0	1/1:5,0:5:8.35:48,8,0	1/1:13,0:13:3:26,3,0	0/0:11,0:11:33.05:0,33,364	1/1:2,2:4:9.02:103,9,0	1/1:6,0:6:14.99:128,15,0	1/1:5,0:5:8.99:77,9,0	0/0:14,0:14:36.09:0,36,427	1/1:7,1:8:12.40:92,12,0	0/0:4,0:4:11.97:0,12,95
chr10	103372294	.	C	CA	758.64	PASS	AB=0.652;AC=23;AF=0.426;AN=54;BaseQRankSum=4.398;DP=352;FS=6.434;HRun=0;HaplotypeScore=71.5317;InbreedingCoeff=0.7607;MQ=74.78;MQ0=0;MQRankSum=-2.520;QD=5.79;ReadPosRankSum=-5.064;VQSLOD=1.0570;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,8:15:0:0,0,0	1/1:2,0:2:3:25,3,0	0/0:7,0:7:20.45:0,20,186	0/0:14,0:13:17.67:0,18,229	0/0:11,0:11:30.07:0,30,383	1/1:6,0:6:5.99:50,6,0	1/1:21,0:21:29.81:233,30,0	0/0:6,0:6:3:0,3,27	1/1:11,0:11:9.38:85,9,0	0/0:30,0:30:81.23:0,81,1043	0/0:7,0:7:15.02:0,15,189	1/1:20,1:21:11.28:87,11,0	1/1:11,0:12:13.29:104,13,0	1/1:4,0:4:8.68:74,9,0	0/0:27,0:27:72.18:0,72,936	0/0:19,0:19:54.04:0,54,679	0/0:32,0:32:87.22:0,87,1128	1/1:22,0:22:26.57:215,27,0	0/0:5,0:5:12:0,12,103	1/1:5,0:5:0.15:0,0,0	0/0:19,0:19:3:0,3,26	0/0:12,0:12:30.09:0,30,395	1/1:5,0:5:5.09:20,5,0	1/1:7,0:7:5.99:50,6,0	./.	0/0:15,0:15:36.11:0,36,489	0/0:13,0:13:17.70:0,18,126	0/0:1,0:1:3:0,3,25
chr10	103372488	.	T	TCAGC	2444.01	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=2.755;DP=468;FS=2.952;HRun=0;HaplotypeScore=92.1217;InbreedingCoeff=0.8811;MQ=87.56;MQ0=0;MQRankSum=-6.122;QD=26.86;ReadPosRankSum=-2.078;VQSLOD=2.9181;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:39.12:0,39,624	0/0:4,0:4:12.03:0,12,178	0/0:33,0:33:63.01:0,63,868	0/0:20,0:20:35.96:0,36,474	0/0:6,0:6:9:0,9,101	0/0:11,0:11:21.06:0,21,330	0/0:35,0:35:81.21:0,81,1262	1/1:7,14:24:51.09:983,51,0	0/0:15,0:15:30.10:0,30,509	0/0:13,0:13:21.07:0,21,356	0/0:4,0:4:6.02:0,6,102	0/0:16,0:16:39.13:0,39,649	0/0:18,0:18:39.12:0,39,632	0/0:17,0:17:39.13:0,39,661	0/0:25,0:25:54.18:0,54,916	0/0:26,0:26:66.20:0,66,1084	0/0:21,0:21:39.08:0,39,603	0/0:28,0:28:66.20:0,66,1080	1/1:6,1:8:8.97:120,9,0	1/1:0,9:9:17.81:448,18,0	1/1:32,14:46:44.87:834,45,0	0/0:2,0:2:3.01:0,3,51	0/0:6,0:6:15.05:0,15,254	0/0:19,0:19:54.18:0,54,916	0/0:11,0:11:18.06:0,18,305	0/0:16,0:16:27.08:0,27,434	1/1:1,3:4:9.03:224,9,0	0/0:9,0:9:21.07:0,21,356
chr10	103372546	.	T	TG	6143.96	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.448;DP=709;FS=1.139;HRun=0;HaplotypeScore=98.0373;InbreedingCoeff=0.9976;MQ=92.82;MQ0=0;MQRankSum=-5.207;QD=45.51;ReadPosRankSum=-0.479;VQSLOD=4.2661;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,1749	0/0:7,0:7:21.07:0,21,293	0/0:30,0:30:86.90:0,87,1119	0/0:30,0:30:81.19:0,81,1031	0/0:22,0:22:63.18:0,63,847	0/0:19,0:19:54.15:0,54,721	0/0:32,0:32:96.23:0,96,1223	1/1:0,23:23:69.24:1104,69,0	0/0:33,0:33:93.31:0,93,1295	0/0:48,0:48:99:0,141,1939	0/0:14,0:14:39.13:0,39,545	0/0:37,0:37:99:0,108,1491	0/0:31,0:31:90.30:0,90,1258	0/0:21,0:21:63.21:0,63,878	0/0:33,0:33:99:0,99,1384	0/0:24,0:24:72.23:0,72,989	0/0:24,0:24:66.22:0,66,923	0/0:17,0:17:45.11:0,45,592	1/1:0,27:27:78.27:1241,78,0	1/1:0,8:8:24.08:382,24,0	1/1:1,64:65:99:2842,181,0	0/0:18,0:18:51.17:0,51,713	0/0:12,0:12:36.09:0,36,468	0/0:31,0:31:93.27:0,93,1262	0/0:15,0:15:45.15:0,45,628	0/0:25,0:25:75.24:0,75,1032	1/1:0,12:12:36.12:575,36,0	0/0:7,0:7:21.07:0,21,294
chr10	103372762	.	C	CTG	4673	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.658;DP=711;FS=1.901;HRun=0;HaplotypeScore=87.8254;InbreedingCoeff=0.9997;MQ=94.30;MQ0=0;MQRankSum=-4.377;QD=45.81;ReadPosRankSum=-1.944;VQSLOD=5.5706;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,153,2244	0/0:11,0:11:33.11:0,33,485	0/0:40,0:40:99:0,114,1568	0/0:25,0:25:69.21:0,69,967	0/0:33,0:33:93.25:0,93,1340	0/0:19,0:19:57.19:0,57,839	0/0:27,0:27:78.26:0,78,1147	1/1:1,23:25:75.20:1301,75,0	0/0:28,0:28:81.26:0,81,1173	0/0:27,0:27:81.27:0,81,1183	0/0:17,0:17:45.15:0,45,660	0/0:19,0:19:54.18:0,54,795	0/0:30,0:30:90.30:0,90,1322	0/0:15,0:15:45.14:0,45,643	0/0:34,0:34:96.30:0,96,1371	0/0:32,0:32:96.32:0,96,1412	0/0:28,0:28:84.26:0,84,1213	0/0:23,0:23:69.23:0,69,1013	1/1:2,11:14:33.03:519,33,0	1/1:1,17:18:45.15:842,45,0	1/1:1,24:25:57.19:1065,57,0	0/0:28,0:28:78.25:0,78,1128	0/0:22,0:22:63.21:0,63,925	0/0:33,0:32:99:0,99,1435	0/0:22,0:22:63.19:0,63,885	0/0:32,0:32:93.23:0,93,1342	1/1:1,19:20:51.17:946,51,0	0/0:11,0:11:30.10:0,30,440
chr10	103373372	.	GGTGTGTGTGTGT	G	4244.59	PASS	AB=0.810;AC=23;AF=0.411;AN=56;BaseQRankSum=8.645;DP=556;FS=5.419;HRun=0;HaplotypeScore=166.7487;InbreedingCoeff=0.7608;MQ=65.97;MQ0=11;MQRankSum=-7.342;QD=18.62;ReadPosRankSum=2.085;VQSLOD=3.5020;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,12:38:12:302,12,0	1/1:2,0:3:3.01:84,3,0	0/0:24,0:16:3.01:0,3,34	0/0:26,0:18:2.90:0,3,16	0/0:13,0:13:12.04:0,12,478	1/1:8,9:18:15.05:478,15,0	1/1:16,10:26:8.84:309,9,0	0/0:26,0:26:30.09:0,30,1004	1/1:12,6:19:18.06:600,18,0	0/0:9,0:10:18.06:0,18,759	0/0:7,0:7:9.03:0,9,348	0/1:13,4:16:10.12:173,0,10	1/1:14,8:23:27.09:912,27,0	1/1:13,7:20:9.03:310,9,0	0/0:24,0:24:39.12:0,39,1730	0/0:19,0:21:36.11:0,36,1667	0/0:28,0:28:53.19:0,53,2563	1/1:9,10:19:12.04:373,12,0	0/0:18,0:16:12.02:0,12,349	0/0:11,0:11:9.03:0,9,409	0/0:35,0:46:14.98:0,15,311	0/0:19,0:19:15.01:0,15,623	1/1:4,7:11:11.99:327,12,0	1/1:9,6:16:3.01:84,3,0	1/1:11,3:15:9.03:291,9,0	0/0:27,0:27:32.46:0,32,1227	0/0:13,0:13:21.07:0,21,735	0/0:11,0:11:21.07:0,21,974
chr10	103373562	.	GAC	G	13323.48	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=13.356;DP=640;FS=12.591;HRun=0;HaplotypeScore=82.9761;InbreedingCoeff=0.9900;MQ=89.02;MQ0=1;MQRankSum=-3.355;QD=34.52;ReadPosRankSum=3.740;VQSLOD=6.8687;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,41:44:99:1418,99,0	1/1:0,6:6:18.06:258,18,0	0/0:25,0:25:72.09:0,72,1204	0/0:30,0:31:75.14:0,75,1238	0/0:26,0:26:66.23:0,66,1210	1/1:1,23:23:57.19:817,57,0	1/1:2,23:25:51.17:731,51,0	1/1:1,30:31:90.29:1271,90,0	1/1:1,21:22:51.17:731,51,0	0/0:18,0:18:54.17:0,54,939	0/0:9,0:9:24.08:0,24,427	1/1:0,22:22:63.21:902,63,0	1/1:3,22:25:60.20:852,60,0	1/1:1,18:19:42.13:602,42,0	0/0:30,0:30:90.31:0,90,1636	0/0:27,0:26:81.28:0,81,1484	0/0:32,0:32:90.28:0,90,1592	1/1:0,13:13:30.10:430,30,0	1/1:1,15:16:44.74:612,45,0	1/1:0,13:13:30.10:429,30,0	1/1:2,40:42:99:1462,102,0	0/0:30,0:30:84.26:0,84,1506	1/1:0,17:17:38.88:533,39,0	1/1:1,29:30:72.24:1032,72,0	1/1:2,18:20:39.13:559,39,0	0/0:23,0:23:66.23:0,66,1210	1/1:0,17:17:48.16:687,48,0	0/0:3,0:3:9.03:0,9,165
chr10	103373971	.	GGGGTGTGTGCT	G	21727.37	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=16.464;DP=563;FS=0.348;HRun=0;HaplotypeScore=201.4468;InbreedingCoeff=0.9880;MQ=87.63;MQ0=0;MQRankSum=-15.996;QD=66.24;ReadPosRankSum=1.713;VQSLOD=4.3059;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,30:37:66.22:2106,66,0	1/1:2,4:6:9.03:318,9,0	0/0:29,0:29:63.25:0,63,3640	0/0:25,0:25:63.04:0,63,2960	0/0:12,0:12:36.12:0,36,2005	1/1:0,25:25:57.19:1864,57,0	1/1:3,19:22:51.18:1785,51,0	1/1:6,15:21:45.14:1360,45,0	1/1:3,14:17:36.12:1198,36,0	0/0:22,0:22:66.23:0,66,3619	0/0:13,0:13:30.10:0,30,1432	1/1:1,17:18:45.15:1585,45,0	1/1:1,21:22:57.19:1903,57,0	1/1:4,24:28:66.23:2325,66,0	0/0:29,0:29:87.30:0,87,4519	0/0:31,0:31:78.27:0,78,4319	0/0:30,0:30:90.31:0,90,4650	1/1:3,7:10:18.06:635,18,0	1/1:3,12:15:36.12:1105,36,0	1/1:2,8:10:24.08:633,24,0	1/1:11,16:27:27.09:590,27,0	0/0:15,0:15:39.13:0,39,2155	1/1:2,11:13:30.10:1058,30,0	1/1:3,17:20:21.07:658,21,0	1/1:3,11:14:27.09:873,27,0	0/0:22,0:22:66.23:0,66,3672	1/1:3,20:23:51.18:1731,51,0	0/0:7,0:7:18.06:0,18,996
chr10	103374309	.	CTGTG	C	4270.76	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=4.992;DP=320;FS=1.641;HRun=0;HaplotypeScore=140.0161;InbreedingCoeff=0.8362;MQ=49.59;MQ0=1;MQRankSum=-1.987;QD=25.73;ReadPosRankSum=-0.008;VQSLOD=4.2986;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:36.12:579,36,0	1/1:3,1:3:3.01:47,3,0	0/0:15,0:8:4.72:0,5,180	0/0:10,0:11:12.03:0,12,208	0/0:15,0:14:6.02:0,6,132	1/1:0,5:5:9.03:144,9,0	1/1:4,6:10:18.06:290,18,0	1/1:5,3:8:9.03:147,9,0	1/1:4,4:8:9.03:142,9,0	0/0:11,0:11:33.06:0,33,734	0/0:16,0:14:11.07:0,11,264	1/1:3,7:10:18.06:283,18,0	1/1:1,6:7:9.03:144,9,0	1/1:2,9:11:21.07:335,21,0	0/0:20,0:20:33.11:0,33,738	0/0:16,0:16:33.06:0,33,698	0/0:16,0:16:27.04:0,27,557	1/1:0,6:6:15.05:233,15,0	1/1:4,3:7:9.03:148,9,0	1/1:5,9:11:15.05:238,15,0	1/1:5,6:11:12.04:193,12,0	0/0:14,0:13:18.06:0,18,400	1/1:3,4:7:9.03:144,9,0	1/1:2,4:6:3.01:48,3,0	1/1:5,20:24:51.17:818,51,0	0/0:17,0:14:28.41:0,28,692	1/1:5,8:13:21.07:337,21,0	0/0:3,0:3:9.03:0,9,207
chr10	103374697	.	T	TA	6981.69	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=7.853;DP=511;FS=3.912;HRun=8;HaplotypeScore=76.3321;InbreedingCoeff=0.9120;MQ=62.37;MQ0=3;MQRankSum=-0.428;QD=25.39;ReadPosRankSum=0.695;VQSLOD=5.6611;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:20:36.11:415,36,0	1/1:3,7:10:21.06:243,21,0	0/0:24,0:8:7.10:0,7,30	0/0:21,0:14:3.73:0,4,57	0/0:29,0:29:72.88:0,73,646	1/1:1,20:19:48.14:554,48,0	1/1:2,5:7:9.03:104,9,0	1/1:2,16:18:45.08:488,45,0	1/1:4,19:22:29.73:596,30,0	0/0:27,0:27:78.04:0,78,710	0/0:22,0:22:48:0,48,433	1/1:1,14:14:33.10:381,33,0	1/1:2,11:13:27.08:310,27,0	1/1:2,14:16:30.09:346,30,0	0/0:24,0:23:63.02:0,63,569	0/0:27,0:27:77.99:0,78,693	0/0:12,0:12:32.92:0,33,281	1/1:2,9:11:0.43:219,0,0	1/1:4,17:21:51.10:557,51,0	1/1:3,14:17:39.06:435,39,0	1/1:1,13:14:33.10:381,33,0	0/0:21,0:21:53.94:0,54,480	1/1:5,18:23:57.17:655,57,0	1/1:0,13:12:32.91:332,33,0	1/1:1,21:22:60.18:689,60,0	0/0:25,0:25:68.93:0,69,605	1/1:0,10:10:24.07:277,24,0	0/0:4,0:4:9:0,9,82
chr10	103376202	.	G	GGT	8615.25	PASS	AC=34;AF=0.654;AN=52;BaseQRankSum=3.324;DP=266;FS=8.765;HRun=0;HaplotypeScore=73.3875;InbreedingCoeff=0.8624;MQ=61.80;MQ0=0;MQRankSum=-7.665;QD=40.07;ReadPosRankSum=3.203;VQSLOD=6.4901;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,12:24:54.08:870,54,0	1/1:1,2:3:9.03:153,9,0	0/0:14,0:12:31.72:0,32,384	0/0:12,0:9:18.06:0,18,244	./.	1/1:5,7:12:30.10:510,30,0	1/1:9,11:21:54.18:897,54,0	1/1:12,5:16:33.10:527,33,0	1/1:9,11:20:51.17:855,51,0	0/0:3,0:3:6.02:0,6,85	0/0:3,0:3:6.02:0,6,86	1/1:4,11:15:45.08:723,45,0	1/1:7,7:14:36.11:584,36,0	1/1:5,9:14:42.07:673,42,0	0/0:1,0:1:3.01:0,3,43	0/0:7,0:7:12.04:0,12,171	0/0:2,0:2:6.02:0,6,86	1/1:4,1:5:12.04:210,12,0	1/1:2,4:6:15.05:257,15,0	1/1:4,5:9:27.02:440,27,0	1/1:9,7:16:33.03:503,33,0	0/0:4,0:4:12.03:0,12,155	1/1:4,4:8:15.05:223,15,0	1/1:7,6:13:18.05:298,18,0	1/1:2,2:4:12.04:197,12,0	0/0:2,0:2:6.01:0,6,71	1/1:2,12:14:39.13:695,39,0	./.
chr10	103376204	.	TGG	T	3666.98	PASS	AB=0.904;AC=29;AF=0.558;AN=52;BaseQRankSum=4.403;DP=258;FS=4.736;HRun=3;HaplotypeScore=88.0444;InbreedingCoeff=0.5264;MQ=63.28;MQ0=0;MQRankSum=-7.307;QD=17.38;ReadPosRankSum=6.054;VQSLOD=1.0329;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,3:21:53.31:449,53,0	1/1:3,0:3:8.96:86,9,0	0/0:13,0:11:32.85:0,33,456	0/0:12,0:9:20.76:0,21,313	./.	1/1:10,1:11:28.09:238,28,0	1/1:19,2:21:43.08:359,43,0	0/1:13,3:15:23.43:228,0,23	1/1:19,1:20:15.22:334,15,0	0/0:2,0:2:6.02:0,6,101	0/0:2,0:2:6.02:0,6,101	1/1:15,0:15:24.38:220,24,0	1/1:12,2:14:32.58:275,33,0	0/1:15,0:15:19.37:163,0,19	0/0:1,0:1:3.01:0,3,58	0/0:8,0:8:21.02:0,21,334	0/0:2,0:2:6.02:0,6,101	1/1:3,2:5:11.67:97,12,0	1/1:5,0:5:13.69:86,14,0	1/1:7,1:9:23.81:200,24,0	0/1:13,4:17:10.23:241,0,10	0/0:4,0:4:12.03:0,12,155	0/1:8,0:8:7.85:71,0,8	0/1:11,2:13:3.58:181,0,4	1/1:3,1:4:11.97:129,12,0	0/0:2,0:2:6.02:0,6,115	1/1:12,2:14:38.76:309,39,0	./.
chr10	103376212	.	TG	T	4804.44	PASS	AC=34;AF=0.654;AN=52;BaseQRankSum=4.171;DP=246;FS=5.555;HRun=5;HaplotypeScore=81.2376;InbreedingCoeff=0.7754;MQ=66.22;MQ0=1;MQRankSum=-7.447;QD=23.90;ReadPosRankSum=3.320;VQSLOD=4.0084;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,13:18:32.97:370,33,0	1/1:0,3:3:9.03:100,9,0	0/0:10,0:8:15.02:0,15,165	0/0:13,0:10:15.71:0,16,150	0/0:2,0:2:3.01:0,3,40	1/1:1,8:9:24.07:270,24,0	1/1:4,19:23:48.13:538,48,0	1/1:2,8:10:21.01:237,21,0	1/1:3,16:19:41.98:468,42,0	./.	0/0:1,0:1:3.01:0,3,41	1/1:1,15:16:48.14:541,48,0	1/1:4,8:12:24.06:270,24,0	1/1:4,13:17:47.62:509,48,0	0/0:2,0:2:3.01:0,3,40	0/0:12,0:12:30.03:0,30,368	0/0:2,0:2:6.02:0,6,81	1/1:2,3:5:8.60:101,9,0	1/1:2,6:8:21.06:234,21,0	1/1:1,7:8:18.05:201,18,0	1/1:4,14:17:26.75:304,27,0	0/0:1,0:1:3.01:0,3,40	1/1:2,5:7:8.79:101,9,0	1/1:4,8:12:8.70:95,9,0	1/1:0,3:3:9.03:102,9,0	0/0:1,0:1:3.01:0,3,41	1/1:3,10:13:32.68:365,33,0	./.
chr10	103376217	.	GT	G	1950.93	PASS	AB=1.000;AC=29;AF=0.558;AN=52;BaseQRankSum=8.383;DP=236;FS=11.792;HRun=1;HaplotypeScore=89.1616;InbreedingCoeff=0.4408;MQ=62.81;MQ0=1;MQRankSum=-8.450;QD=10.21;ReadPosRankSum=6.804;VQSLOD=0.1436;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:72.37:118,0,72	1/1:3,0:3:8.70:48,9,0	0/0:7,0:5:15.03:0,15,204	0/0:10,0:9:18.86:0,19,219	0/0:2,0:2:3.01:0,3,46	0/1:11,0:11:14.65:100,0,15	1/1:20,1:21:25.88:252,26,0	0/1:10,0:10:47.77:59,0,48	0/1:19,0:19:23.58:183,0,24	./.	0/0:1,0:1:3.01:0,3,46	1/1:15,1:16:47.16:318,47,0	1/1:9,1:10:9.76:119,10,0	1/1:17,1:18:24.85:255,25,0	0/0:2,0:2:6.01:0,6,71	0/0:15,0:15:42.09:0,42,548	0/0:2,0:2:6.02:0,6,92	1/1:4,0:4:8.75:56,9,0	1/1:7,0:7:18.21:96,18,0	0/1:8,0:8:19.34:83,0,19	1/1:16,0:15:24.84:126,25,0	0/0:2,0:2:6.01:0,6,71	1/1:5,0:5:8.45:56,8,0	1/1:10,0:10:7.99:35,8,0	1/1:3,0:3:8.30:41,8,0	0/0:3,0:3:9.01:0,9,100	1/1:11,0:11:32:191,32,0	./.
chr10	103376862	.	GT	G	13550.75	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=13.638;DP=578;FS=6.214;HRun=1;HaplotypeScore=140.5415;InbreedingCoeff=0.9963;MQ=76.20;MQ0=0;MQRankSum=-11.682;QD=36.23;ReadPosRankSum=1.417;VQSLOD=4.1271;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:29:78.10:985,78,0	1/1:0,11:11:27.09:376,27,0	0/0:24,0:24:51.85:0,52,797	0/0:26,0:27:61.53:0,62,839	0/0:11,0:11:33.09:0,33,481	1/1:2,24:26:75.23:1012,75,0	1/1:0,20:20:60.20:837,60,0	1/1:0,33:33:94.93:1248,95,0	1/1:5,27:32:92.22:1198,92,0	0/0:15,0:15:45.14:0,45,653	0/0:5,0:5:15.05:0,15,230	1/1:4,30:33:99:1316,99,0	1/1:2,11:13:36.11:485,36,0	1/1:2,23:25:75.20:1008,75,0	0/0:39,0:39:99:0,114,1694	0/0:20,1:21:18.48:0,18,826	0/0:20,0:20:57.06:0,57,823	1/1:3,11:13:39.06:495,39,0	1/1:0,27:27:75.12:999,75,0	1/1:0,13:13:36.12:501,36,0	1/1:0,14:14:33.06:438,33,0	0/0:11,0:11:33.11:0,33,497	1/1:0,19:19:29.92:396,30,0	1/1:0,20:20:42.14:585,42,0	1/1:2,18:20:54.13:711,54,0	0/0:19,0:19:57.14:0,57,788	1/1:2,22:24:69.23:961,69,0	0/0:12,0:12:36.12:0,36,542
chr10	103376906	.	T	TC	5852.60	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=12.948;DP=650;FS=53.627;HRun=1;HaplotypeScore=298.7010;InbreedingCoeff=0.9347;MQ=64.80;MQ0=0;MQRankSum=-13.807;QD=13.80;ReadPosRankSum=-5.388;VQSLOD=1.2500;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,40:45:27.75:223,28,0	1/1:2,9:11:18.04:266,18,0	0/0:37,0:29:74.50:0,74,966	0/0:36,0:33:82.28:0,82,1034	0/0:14,0:14:36.10:0,36,453	1/1:3,20:22:14.88:125,15,0	1/1:5,23:28:2.56:135,3,0	1/1:7,21:26:78.25:1126,78,0	1/1:8,30:39:53.95:643,54,0	0/0:15,0:15:45.15:0,45,584	0/0:6,0:6:18.06:0,18,234	1/1:8,30:38:42:495,42,0	1/1:2,16:18:25.14:373,25,0	1/1:2,27:29:26.92:319,27,0	0/0:36,0:36:99:0,105,1362	0/0:18,1:19:37.18:0,37,668	0/0:23,0:23:66.21:0,66,856	1/1:4,8:11:23.43:320,23,0	1/1:4,15:19:31.45:688,31,0	1/1:8,15:23:8.81:84,9,0	1/1:9,8:17:9.03:134,9,0	0/0:12,0:12:36.12:0,36,466	1/1:3,20:23:11.87:105,12,0	1/1:7,13:20:8.44:59,8,0	1/1:5,14:19:14.78:100,15,0	0/0:12,0:12:36.11:0,36,456	1/1:10,22:31:22.20:659,22,0	0/0:16,0:16:43.19:0,43,504
chr10	103376913	.	ATG	A	463.23	PASS	AB=0.829;AC=15;AF=0.268;AN=56;BaseQRankSum=7.940;DP=743;FS=2.830;HRun=0;HaplotypeScore=361.1661;InbreedingCoeff=0.1023;MQ=54.42;MQ0=4;MQRankSum=-8.125;QD=1.28;ReadPosRankSum=2.337;VQSLOD=1.5617;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,16:57:9.51:0,10,42	0/1:8,3:11:12.55:13,0,41	0/0:47,0:31:62.40:0,62,1142	0/0:39,0:30:63.21:0,63,1051	0/0:14,0:14:42.14:0,42,744	0/0:13,9:23:2.76:0,3,13	0/1:15,16:32:16.02:19,0,16	0/1:35,2:34:99:116,0,133	0/1:27,14:45:23.51:63,0,24	0/0:18,0:18:54.17:0,54,862	0/0:7,0:7:18.06:0,18,308	1/1:24,16:41:1.61:139,2,0	0/1:13,10:23:31.60:42,0,32	1/1:14,13:33:1.14:37,1,0	0/0:39,0:39:99:0,108,1813	0/0:20,1:21:60.19:0,60,1025	0/0:26,0:26:72.15:0,72,1139	0/1:14,2:15:1.54:2,0,17	0/1:18,1:17:1.35:91,0,1	0/1:22,0:22:0.08:0,0,0	0/0:24,0:24:2.54:0,3,12	0/0:12,0:12:30.09:0,30,501	0/0:5,15:22:2.74:0,3,12	0/1:14,7:24:0:0,0,0	0/1:11,10:22:0.02:0,0,0	0/0:15,0:15:45.15:0,45,788	0/1:33,2:34:75.65:76,0,138	0/0:15,0:15:23.38:0,23,526
chr10	103376917	.	GTGTATA	G	1609.43	PASS	AB=0.871;AC=22;AF=0.393;AN=56;BaseQRankSum=9.921;DP=727;FS=13.987;HRun=0;HaplotypeScore=376.1243;InbreedingCoeff=0.1147;MQ=49.49;MQ0=6;MQRankSum=-10.038;QD=3.44;ReadPosRankSum=-1.754;VQSLOD=0.5493;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:49,7:56:43.91:44,0,60	0/1:9,2:11:9.22:73,0,9	0/0:51,0:31:75.21:0,75,2137	0/0:35,0:25:72.24:0,72,2059	0/0:14,0:14:42.14:0,42,1461	1/1:19,4:22:2.93:24,3,0	0/1:27,4:32:2.79:93,0,3	0/1:32,1:33:36.76:285,0,37	0/1:36,6:43:2.98:238,0,3	0/0:18,0:18:54.18:0,54,1749	0/0:6,0:6:18.06:0,18,598	1/1:30,7:38:11.68:132,12,0	0/1:21,3:23:26.73:144,0,27	0/1:28,3:31:16.88:17,0,44	0/0:38,0:38:99:0,108,3546	0/0:22,0:22:63.20:0,63,2124	0/0:26,0:26:69.17:0,69,2156	0/1:13,2:14:45.89:153,0,46	0/1:11,3:14:43.88:198,0,44	1/1:15,4:21:2.64:17,3,0	1/1:15,8:24:4.50:21,4,0	0/0:11,0:11:27.09:0,27,962	1/1:19,3:22:2.39:19,2,0	0/1:20,4:24:0.05:0,0,0	0/0:17,5:22:0:0,0,1	0/0:15,0:15:45.15:0,45,1548	0/1:26,7:34:99:312,0,221	0/1:15,0:15:0.29:0,0,1008
chr10	103376921	.	A	ATG	2069.05	PASS	AB=0.854;AC=28;AF=0.500;AN=56;BaseQRankSum=12.260;DP=699;FS=27.700;HRun=0;HaplotypeScore=335.7381;InbreedingCoeff=0.7303;MQ=46.81;MQ0=8;MQRankSum=-11.580;QD=4.90;ReadPosRankSum=0.289;VQSLOD=1.6107;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:40,14:54:13.22:58,0,13	1/1:11,0:11:16.55:95,17,0	0/0:55,0:31:80.61:0,81,1124	0/0:38,0:25:72.02:0,72,1000	0/0:15,0:15:45.15:0,45,687	1/1:20,2:21:2.80:13,3,0	1/1:27,3:30:6.16:116,6,0	1/1:16,14:26:43.76:630,44,0	1/1:38,3:41:33.41:260,33,0	0/0:19,0:19:54.17:0,54,797	0/0:6,0:6:18.06:0,18,274	1/1:32,3:34:23.35:185,23,0	1/1:19,3:21:14.97:142,15,0	1/1:22,6:28:7.04:76,7,0	0/0:38,0:38:99:0,108,1585	0/0:22,0:22:63.20:0,63,942	0/0:24,0:24:63.17:0,63,935	1/1:15,0:14:25.39:269,25,0	1/1:13,0:11:16.47:132,16,0	0/1:17,4:21:0.17:0,0,0	0/0:18,4:22:1.94:0,2,6	0/0:10,0:10:30.08:0,30,437	1/1:20,2:22:2.60:10,3,0	0/1:19,4:24:0:0,0,0	0/1:19,1:20:0.01:0,0,0	0/0:15,0:15:45.15:0,45,689	1/1:29,5:33:2.96:272,3,0	0/0:13,0:13:26.33:0,26,457
chr10	103376927	.	GTACA	G	1336.43	PASS	AB=0.976;AC=22;AF=0.393;AN=56;BaseQRankSum=11.241;DP=776;FS=11.305;HRun=0;HaplotypeScore=371.5164;InbreedingCoeff=0.4072;MQ=43.70;MQ0=10;MQRankSum=-9.757;QD=3.04;ReadPosRankSum=1.187;VQSLOD=0.8219;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:55,0:55:1.44:39,0,1	1/1:12,0:12:16.51:126,17,0	0/0:61,0:30:62.26:0,62,1807	0/0:44,0:27:78.25:0,78,1914	0/0:15,0:15:45.14:0,45,1190	1/1:24,0:23:2.50:9,2,0	0/1:33,0:33:43.08:43,0,111	0/1:34,5:34:99:149,0,932	1/1:41,1:42:10.47:229,10,0	0/0:19,0:19:57.19:0,57,1503	0/0:7,0:7:21.07:0,21,572	1/1:37,0:36:30.84:400,31,0	0/1:26,0:23:6.56:172,0,7	1/1:33,0:33:9.81:123,10,0	0/0:36,0:36:99:0,105,2922	0/0:22,0:22:63.22:0,63,1763	0/0:26,0:26:69.24:0,69,1807	0/1:17,0:16:99:141,0,114	0/1:18,1:17:58.76:59,0,290	0/0:25,1:26:4.72:0,5,55	0/1:29,1:30:0.15:9,0,0	0/0:12,0:12:33.11:0,33,876	1/1:23,0:23:2.50:10,2,0	1/1:28,0:28:0.46:1,0,0	0/1:22,0:22:0:0,0,0	0/0:17,0:17:51.16:0,51,1279	0/0:35,1:36:22.28:0,22,211	0/0:11,2:13:7.76:0,8,736
chr10	103376928	.	TAC	T	500.88	PASS	AB=0.783;AC=15;AF=0.268;AN=56;BaseQRankSum=9.370;DP=748;FS=7.989;HRun=0;HaplotypeScore=343.8960;InbreedingCoeff=0.1404;MQ=43.97;MQ0=11;MQRankSum=-7.512;QD=1.59;ReadPosRankSum=2.125;VQSLOD=0.8698;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,16:51:5.90:0,6,35	1/1:9,3:12:0.64:41,1,0	0/0:63,0:30:46.66:0,47,1253	0/0:45,0:27:80.29:0,80,1408	0/0:15,0:15:42.14:0,42,811	0/0:15,7:20:1.21:0,1,3	0/1:15,16:31:19.41:19,0,134	0/0:34,0:29:18.19:0,18,703	0/1:23,15:38:69.10:88,0,69	0/0:22,0:22:66.20:0,66,1202	0/0:8,0:8:24.08:0,24,445	1/1:19,16:35:6.93:193,7,0	0/1:16,10:23:63.01:67,0,63	0/1:18,13:31:9.83:49,0,10	0/0:36,0:36:99:0,105,2019	0/0:21,1:22:63.22:0,63,1217	0/0:26,0:26:69.24:0,69,1303	0/1:12,2:14:40.04:40,0,110	0/1:16,0:14:61.82:62,0,184	0/0:22,0:22:2.51:0,3,51	1/1:30,0:30:1.50:9,2,0	0/0:12,0:12:33.11:0,33,619	0/0:8,15:23:1.47:0,1,4	0/1:19,8:27:0:0,0,0	0/1:11,10:21:0.02:0,0,0	0/0:17,0:17:45.15:0,45,869	0/1:31,3:33:74.34:74,0,113	0/0:13,0:13:20.22:0,20,539
chr10	103376939	.	G	GTACA	2728.27	PASS	AB=0.969;AC=22;AF=0.393;AN=56;BaseQRankSum=11.163;DP=802;FS=9.090;HRun=0;HaplotypeScore=367.0729;InbreedingCoeff=0.4876;MQ=38.74;MQ0=13;MQRankSum=-9.053;QD=6.54;ReadPosRankSum=4.667;VQSLOD=0.8310;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:58,2:60:27.54:200,0,28	1/1:8,4:12:15:355,15,0	0/0:57,0:27:74.37:0,74,1431	0/0:41,0:22:60.21:0,60,1176	0/0:14,0:14:42.13:0,42,803	1/1:24,2:24:3.01:84,3,0	0/1:38,0:38:12.23:92,0,12	0/0:55,0:47:75.57:0,76,1183	1/1:35,4:39:26.76:534,27,0	0/0:20,0:20:60.21:0,60,1199	0/0:10,0:10:30.10:0,30,599	1/1:36,2:36:22.57:396,23,0	1/1:21,2:21:20.33:368,20,0	1/1:31,1:32:9.02:161,9,0	0/0:36,0:36:99:0,105,2071	0/0:22,0:22:63.22:0,63,1258	0/0:30,0:30:78.20:0,78,1446	0/1:16,2:18:87.80:199,0,88	0/1:24,0:20:99:166,0,263	1/1:24,0:24:4.25:18,4,0	0/0:30,0:30:5.22:0,5,42	0/0:11,0:11:30.10:0,30,574	1/1:22,1:23:5.15:91,5,0	0/0:29,1:30:0.20:0,0,1	0/1:24,0:24:0:0,0,0	0/0:16,0:16:48.16:0,48,950	0/1:33,2:34:99:252,0,355	0/0:13,0:13:20.62:0,21,546
chr10	103376951	.	ATG	A	1150.55	PASS	AB=0.927;AC=22;AF=0.393;AN=56;BaseQRankSum=9.806;DP=787;FS=0.507;HRun=0;HaplotypeScore=323.0528;InbreedingCoeff=0.2363;MQ=42.63;MQ0=13;MQRankSum=-10.192;QD=2.29;ReadPosRankSum=0.693;VQSLOD=1.8259;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:53,6:59:27.95:59,0,28	0/1:11,0:11:0.70:1,0,27	0/0:50,0:26:57.09:0,57,880	0/0:44,1:25:61.87:0,62,1018	0/0:14,0:14:33.11:0,33,562	1/1:25,1:24:2.04:6,2,0	1/1:38,2:40:14.65:146,15,0	0/1:42,7:44:99:299,0,271	0/1:35,3:38:4.72:95,0,5	0/0:21,0:20:60.21:0,60,1036	0/0:12,0:12:36.12:0,36,613	0/1:37,2:37:28.88:69,0,29	0/1:24,1:22:37.12:75,0,37	1/1:27,6:33:6.02:78,6,0	0/0:32,0:32:87.30:0,87,1492	0/0:19,0:19:48.14:0,48,791	0/0:29,0:30:72.22:0,72,1198	1/1:17,1:18:0.85:112,1,0	0/1:23,4:24:99:121,0,166	1/1:24,0:24:5.86:56,6,0	1/1:26,3:29:2.38:10,2,0	0/0:13,0:13:33.11:0,33,563	0/0:16,3:19:2.68:0,3,11	0/1:22,5:27:0:0,0,1	0/1:26,1:27:0.02:0,0,0	0/0:18,0:18:51.17:0,51,859	0/1:29,1:29:99:183,0,112	0/0:12,0:12:30.10:0,30,498
chr10	103376953	.	GTGTGTGTA	G	5125.95	PASS	AB=0.718;AC=24;AF=0.429;AN=56;BaseQRankSum=9.852;DP=786;FS=12.183;HRun=0;HaplotypeScore=350.4764;InbreedingCoeff=0.4167;MQ=42.85;MQ0=11;MQRankSum=-10.848;QD=10.93;ReadPosRankSum=-0.026;VQSLOD=2.0461;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,33:61:58.50:169,0,59	1/1:6,4:10:4.52:221,5,0	0/0:47,0:27:60.10:0,60,1622	0/0:46,0:26:73.61:0,74,1927	0/0:13,0:13:33.11:0,33,1072	1/1:10,16:25:3.01:42,3,0	1/1:12,27:39:14.87:371,15,0	0/1:36,13:44:99:1304,0,284	1/1:17,21:38:23.38:482,23,0	0/0:21,0:20:60.21:0,60,2276	0/0:12,0:12:36.12:0,36,1376	0/1:18,21:37:19.61:264,0,20	0/1:11,13:22:12.35:230,0,12	1/1:18,16:34:5.63:102,6,0	0/0:32,0:32:87.30:0,87,3423	0/0:18,0:18:48.14:0,48,1625	0/0:28,0:28:72.23:0,72,2865	1/1:8,10:18:17.71:455,18,0	0/1:23,3:23:99:528,0,128	1/1:7,17:24:5.58:158,6,0	1/1:22,8:30:8.19:63,8,0	0/0:12,0:12:33.11:0,33,1210	1/1:16,4:20:5.70:90,6,0	0/0:24,6:30:0.13:0,0,1	0/0:10,17:27:0:0,0,0	0/0:19,0:19:54.19:0,54,2200	0/1:16,14:29:99:648,0,142	0/0:12,0:12:29.80:0,30,1078
chr10	103376967	.	A	ATG	75.29	PASS	AB=0.945;AC=8;AF=0.143;AN=56;BaseQRankSum=7.295;DP=742;FS=4.142;HRun=0;HaplotypeScore=283.9202;InbreedingCoeff=0.0372;MQ=46.51;MQ0=7;MQRankSum=-7.576;QD=0.32;ReadPosRankSum=-2.513;VQSLOD=2.0626;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:54,1:55:2.34:2,0,51	0/0:11,1:12:1.96:0,2,105	0/0:32,0:23:59.98:0,60,781	0/0:45,0:34:89.33:0,89,1056	0/0:10,0:10:24.08:0,24,330	0/0:22,3:23:2.84:0,3,14	0/1:34,0:34:11.27:11,0,36	0/0:50,0:46:58.66:0,59,614	0/0:32,2:34:15.12:0,15,147	0/0:26,0:25:66.15:0,66,858	0/0:15,0:15:39.13:0,39,535	0/1:29,1:28:6.89:30,0,7	0/0:24,3:24:1.83:0,2,174	1/1:28,6:34:5.67:36,6,0	0/0:35,0:35:99:0,99,1341	0/0:16,0:16:45.14:0,45,601	0/0:30,0:30:78.03:0,78,1024	0/0:16,0:16:4.40:0,4,185	0/1:27,2:25:74.90:75,0,209	0/1:19,4:23:4.49:4,0,78	0/0:29,0:29:2.80:0,3,24	0/0:13,0:13:39.12:0,39,519	0/0:15,0:15:7.63:0,8,47	0/0:27,1:28:2.91:0,3,25	0/0:23,0:23:8.91:0,9,106	0/0:21,0:21:63.21:0,63,866	0/1:25,2:26:37.68:38,0,175	0/0:8,0:8:24.08:0,24,330
chr10	103377100	.	TC	T	9439.25	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=8.642;DP=502;FS=0.404;HRun=7;HaplotypeScore=50.6076;InbreedingCoeff=0.9563;MQ=77.03;MQ0=0;MQRankSum=-5.194;QD=25.17;ReadPosRankSum=0.818;VQSLOD=5.1915;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,35:38:93.21:947,93,0	1/1:0,9:9:27.06:275,27,0	0/0:14,0:14:15.26:0,15,304	0/0:11,0:11:24.06:0,24,286	0/0:10,0:10:27.09:0,27,338	1/1:0,19:19:48.11:490,48,0	1/1:4,18:22:48.10:485,48,0	1/1:9,26:35:81.15:814,81,0	1/1:0,25:25:69.15:703,69,0	0/0:9,0:9:27.09:0,27,337	0/0:4,0:4:6.02:0,6,75	1/1:2,26:28:66.15:672,66,0	1/1:2,15:17:33.07:336,33,0	1/1:2,16:18:48.11:489,48,0	0/0:21,0:21:54.16:0,54,666	0/0:10,1:11:3.16:0,3,347	0/0:15,0:15:42.13:0,42,528	1/1:2,19:21:57.13:582,57,0	1/1:2,21:23:63.06:617,63,0	1/1:2,17:19:45.10:459,45,0	1/1:1,28:29:72.16:735,72,0	0/0:7,0:7:21.07:0,21,264	1/1:3,12:15:33.07:337,33,0	1/1:0,20:20:54.12:551,54,0	1/1:0,17:17:48.11:489,48,0	0/0:17,0:17:48.15:0,48,604	1/1:3,17:20:45.10:459,45,0	0/0:8,0:8:24.03:0,24,283
chr10	103377751	.	A	AC	4224.04	PASS	AB=1.000;AC=35;AF=0.673;AN=52;BaseQRankSum=1.792;DP=352;FS=3.502;HRun=6;HaplotypeScore=64.2434;InbreedingCoeff=0.7818;MQ=77.17;MQ0=0;MQRankSum=-2.486;QD=15.88;ReadPosRankSum=4.350;VQSLOD=4.5535;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,21:27:48.15:588,48,0	1/1:3,3:6:6.02:75,6,0	0/0:15,0:12:11.82:0,12,174	0/0:11,0:10:9.40:0,9,178	./.	1/1:5,12:17:33.10:410,33,0	1/1:7,18:25:12.51:147,13,0	1/1:15,4:19:21.04:237,21,0	1/1:3,8:11:6.91:77,7,0	0/0:6,0:6:6.46:0,6,54	0/0:8,0:8:11.99:0,12,107	1/1:5,16:21:35.95:446,36,0	1/1:9,10:19:45.32:467,45,0	1/1:3,11:14:21.07:258,21,0	0/1:9,0:9:2.10:2,0,138	0/0:17,0:17:23.58:0,24,292	0/0:11,0:11:13.21:0,13,105	1/1:5,4:9:18.93:214,19,0	1/1:2,6:7:18.06:226,18,0	1/1:3,11:14:21.07:258,21,0	1/1:6,14:20:23.83:275,24,0	0/0:6,0:6:2.97:0,3,20	1/1:2,5:7:3.48:38,3,0	1/1:4,17:21:21.06:254,21,0	1/1:2,10:12:15.03:175,15,0	0/0:5,0:5:9.01:0,9,86	1/1:3,4:7:6.49:76,6,0	./.
chr10	103377763	.	C	CT	1492.63	PASS	AB=0.974;AC=25;AF=0.481;AN=52;BaseQRankSum=3.643;DP=280;FS=104.416;HRun=0;HaplotypeScore=60.4266;InbreedingCoeff=0.2397;MQ=81.22;MQ0=1;MQRankSum=-0.342;QD=7.50;ReadPosRankSum=6.340;VQSLOD=-0.2400;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,1:20:41.26:251,41,0	0/1:4,0:4:0.94:15,0,1	0/0:21,0:16:5.05:0,5,175	0/0:16,0:12:22.90:0,23,279	./.	1/1:9,2:11:17.57:174,18,0	0/1:21,0:21:31.82:32,0,59	0/1:10,0:10:6.15:36,0,6	0/1:7,0:7:2.68:64,0,3	0/0:6,0:6:5.48:0,5,45	0/0:3,0:3:9.01:0,9,93	1/1:16,1:17:21.99:271,22,0	0/1:13,1:14:19.28:162,0,19	1/1:10,1:11:12.62:201,13,0	0/0:10,0:10:18.88:0,19,223	0/0:10,0:10:27.05:0,27,312	0/0:11,0:11:29.72:0,30,264	0/1:8,0:8:23.18:56,0,23	1/1:12,0:11:8.47:71,8,0	0/1:10,0:10:9.58:90,0,10	0/1:20,0:20:6.81:69,0,7	0/0:2,0:2:3:0,3,27	1/1:5,0:5:3.31:14,3,0	1/1:16,0:16:1.21:100,1,0	1/1:8,0:8:10.25:46,10,0	0/0:2,0:2:3.01:0,3,42	0/1:4,0:5:9.66:10,0,17	./.
chr10	103378273	.	TCCCTCCCTCCCTC	T	2610.91	PASS	AB=0.987;AC=21;AF=0.389;AN=54;BaseQRankSum=8.621;DP=193;FS=9.048;HRun=0;HaplotypeScore=116.5015;InbreedingCoeff=0.0217;MQ=52.69;MQ0=0;MQRankSum=-5.370;QD=17.41;ReadPosRankSum=6.322;VQSLOD=0.8784;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:96.38:170,0,96	1/1:3,0:3:6.02:100,6,0	0/0:6,0:5:8.96:0,9,91	0/0:9,0:5:10.74:0,11,185	0/0:3,0:3:6.02:0,6,134	0/1:5,0:5:8.94:130,0,9	0/1:15,0:15:37.87:38,0,121	1/1:13,0:13:8.48:26,8,0	0/1:11,0:11:13.75:186,0,14	0/0:3,0:3:9.03:0,9,127	0/0:3,0:3:3.01:0,3,43	0/1:14,0:14:43.37:223,0,43	0/1:10,0:10:14.44:277,0,14	0/1:7,0:7:86.06:86,0,98	0/0:1,0:1:3.01:0,3,199	0/0:2,0:2:6.02:0,6,241	0/0:2,0:2:6.02:0,6,109	0/1:9,0:9:84.50:127,0,84	1/1:7,1:8:5.05:114,5,0	1/1:0,4:4:12.04:428,12,0	0/1:5,1:6:1.17:102,0,1	0/0:5,0:5:15.05:0,15,373	0/1:9,0:9:15.45:90,0,15	0/0:6,0:6:0.84:0,1,2	0/1:7,0:7:15.71:130,0,16	0/0:3,0:3:9.02:0,9,113	1/1:7,5:12:18.91:547,19,0	./.
chr10	103378277	.	TCCCTCCCTC	T	3601.75	PASS	AB=0.891;AC=30;AF=0.556;AN=54;BaseQRankSum=7.748;DP=180;FS=13.858;HRun=0;HaplotypeScore=100.0080;InbreedingCoeff=0.6680;MQ=61.57;MQ0=0;MQRankSum=-6.168;QD=27.08;ReadPosRankSum=5.284;VQSLOD=2.0265;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:13,5:18:0.71:300,0,1	1/1:1,2:3:6.02:155,6,0	0/0:6,0:5:14.98:0,15,175	0/0:12,0:8:24.03:0,24,289	0/0:3,0:3:6.02:0,6,85	1/1:3,3:6:9.50:237,10,0	1/1:10,2:12:4.51:115,5,0	1/1:8,0:8:12.74:39,13,0	1/1:6,4:10:12.46:312,12,0	0/0:3,0:3:9.03:0,9,125	0/0:2,0:2:3.01:0,3,42	1/1:9,5:14:12.95:404,13,0	1/1:4,6:10:18.53:466,19,0	1/1:5,2:7:5.41:152,5,0	0/0:1,0:1:3.01:0,3,147	0/0:3,0:3:9.03:0,9,231	0/0:3,0:3:9.03:0,9,127	1/1:6,3:9:12.31:253,12,0	1/1:5,0:5:9.88:89,10,0	1/1:4,0:4:12.04:256,12,0	0/1:4,0:4:1.17:58,0,1	0/0:5,0:5:12.04:0,12,270	1/1:6,2:8:6.49:156,6,0	0/0:5,1:6:0.43:0,0,1	1/1:2,4:6:7.64:267,8,0	0/0:3,0:3:9.03:0,9,125	1/1:9,0:9:22.54:341,23,0	./.
chr10	103378290	.	TAGC	T	3002.93	PASS	AC=34;AF=0.630;AN=54;BaseQRankSum=9.803;DP=177;FS=38.735;HRun=0;HaplotypeScore=82.0776;InbreedingCoeff=0.8996;MQ=80.41;MQ0=0;MQRankSum=-10.004;QD=24.61;ReadPosRankSum=5.093;VQSLOD=1.6596;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:34.93:330,35,0	1/1:0,2:2:6.02:81,6,0	0/0:8,0:8:24.08:0,24,529	0/0:14,0:11:33.11:0,33,785	0/0:4,0:4:12.04:0,12,290	1/1:0,5:5:15.01:181,15,0	1/1:2,8:10:24.79:168,25,0	1/1:0,10:10:23.98:202,24,0	1/1:0,8:8:23.87:238,24,0	0/0:4,0:4:12.04:0,12,296	0/0:3,0:3:9.03:0,9,222	1/1:0,11:11:32.66:307,33,0	1/1:1,6:7:20.96:258,21,0	1/1:0,5:5:14.87:134,15,0	0/0:3,0:3:9.03:0,9,222	0/0:7,0:7:21.07:0,21,517	0/0:6,0:6:18.06:0,18,443	1/1:2,4:6:14.99:175,15,0	1/1:0,6:6:15.01:149,15,0	1/1:0,5:5:14.98:185,15,0	1/1:2,3:5:11.75:93,12,0	0/0:3,0:3:9.03:0,9,217	1/1:0,7:7:20.85:208,21,0	1/1:0,6:6:5.86:35,6,0	1/1:0,6:6:16.04:159,16,0	0/0:3,0:3:9.03:0,9,222	1/1:0,9:9:27.03:307,27,0	./.
chr10	103378643	.	A	AATT	24286.57	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-14.594;DP=679;FS=6.503;HRun=0;HaplotypeScore=86.9405;InbreedingCoeff=0.9953;MQ=85.48;MQ0=0;MQRankSum=-7.540;QD=61.96;ReadPosRankSum=2.066;VQSLOD=6.3838;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:34:93.25:2173,93,0	1/1:1,3:4:12.04:263,12,0	0/0:25,0:25:75.18:0,75,1277	0/0:23,0:23:66.16:0,66,1093	0/0:29,0:29:81.26:0,81,1478	1/1:0,21:21:63.22:1514,63,0	1/1:1,20:24:57.20:1379,57,0	1/1:3,32:40:99:2614,120,0	1/1:1,18:19:51.18:1237,51,0	0/0:32,0:32:87.27:0,87,1526	0/0:14,0:14:42.01:0,42,637	1/1:1,19:21:51.18:1251,51,0	1/1:0,21:24:57.20:1369,57,0	1/1:1,24:25:66.23:1571,66,0	0/0:36,0:36:99:0,108,1975	0/0:33,0:33:99:0,99,1742	0/0:32,0:32:90.31:0,90,1665	1/1:1,25:27:66.23:1626,66,0	1/1:2,14:17:47.75:1033,48,0	1/1:1,14:17:45.09:1048,45,0	1/1:1,24:26:62.79:1390,63,0	0/0:23,0:23:66.21:0,66,1187	1/1:0,15:15:39.13:953,39,0	1/1:2,24:30:63.22:1512,63,0	1/1:0,24:24:69.24:1681,69,0	0/0:31,0:31:87.26:0,87,1491	1/1:0,23:24:69.24:1672,69,0	0/0:9,0:9:24.08:0,24,447
chr10	103379815	.	CACACACACACAT	C	6187.67	PASS	AB=0.974;AC=26;AF=0.464;AN=56;BaseQRankSum=13.868;DP=787;FS=2.820;HRun=0;HaplotypeScore=257.4311;InbreedingCoeff=0.3749;MQ=58.54;MQ0=7;MQRankSum=-8.736;QD=13.22;ReadPosRankSum=4.294;VQSLOD=3.2474;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:53,1:54:36.87:270,0,37	1/1:7,0:7:11.96:195,12,0	0/0:19,0:12:29.09:0,29,459	0/0:30,0:20:53.17:0,53,774	0/0:20,0:20:28.68:0,29,504	1/1:26,0:26:13.12:632,13,0	1/1:29,1:30:6.57:453,7,0	0/1:32,0:32:99:245,0,104	1/1:26,1:27:9.11:507,9,0	0/0:35,0:34:95.07:0,95,2729	0/0:17,0:17:42.09:0,42,1836	1/1:27,1:28:16.86:369,17,0	1/1:23,1:24:23.56:501,24,0	1/1:34,0:34:8.76:736,9,0	0/0:47,0:47:80:0,80,2871	0/0:36,0:36:81.17:0,81,3257	0/0:40,0:40:99:0,117,5068	0/1:16,0:16:11.78:169,0,12	1/1:19,0:19:5.73:497,6,0	1/1:19,0:19:15.94:298,16,0	0/1:54,2:55:28.26:313,0,28	0/0:22,0:22:38.15:0,38,1437	0/1:12,1:13:15.12:164,0,15	0/1:37,0:36:99:158,0,189	0/1:21,1:22:29.46:293,0,29	0/0:38,0:37:99:0,108,2849	0/1:23,1:24:20.14:387,0,20	0/0:15,0:15:35.96:0,36,1073
chr10	103379817	.	CACACACACAT	C	9864.59	PASS	AB=0.550;AC=32;AF=0.571;AN=56;BaseQRankSum=12.358;DP=773;FS=3.383;HRun=0;HaplotypeScore=220.6034;InbreedingCoeff=0.8168;MQ=61.67;MQ0=7;MQRankSum=-9.274;QD=21.82;ReadPosRankSum=2.696;VQSLOD=3.6408;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,44:52:11.85:380,12,0	1/1:0,7:7:11.96:319,12,0	0/0:20,0:13:32.08:0,32,439	0/0:30,0:21:56.16:0,56,734	0/0:19,0:19:25.69:0,26,421	1/1:4,21:25:33.11:1106,33,0	1/1:3,26:29:21.07:684,21,0	1/1:28,0:28:53.95:492,54,0	1/1:4,20:24:24.08:785,24,0	0/0:35,0:34:95.15:0,95,2299	0/0:19,0:19:45.05:0,45,1571	1/1:2,28:30:20.94:519,21,0	1/1:3,21:24:23.26:752,23,0	1/1:2,31:33:38.77:1305,39,0	0/0:47,0:47:80.08:0,80,2371	0/0:36,0:36:75.20:0,75,2717	0/0:40,0:40:99:0,117,4304	1/1:1,14:15:4.35:296,4,0	1/1:2,16:18:47.88:760,48,0	1/1:1,17:18:15.94:505,16,0	1/1:52,1:52:56.62:543,57,0	0/0:23,0:23:41.34:0,41,1250	1/1:2,12:14:5.75:180,6,0	0/1:8,29:36:99:287,0,146	0/1:3,18:21:7.74:367,0,8	0/0:37,0:36:99:0,105,2411	1/1:6,18:24:17.92:584,18,0	0/0:15,0:15:35.96:0,36,910
chr10	103380154	.	AGAACC	A	2309.03	PASS	AB=0.925;AC=31;AF=0.596;AN=52;BaseQRankSum=5.838;DP=336;FS=12.188;HRun=0;HaplotypeScore=48.9907;InbreedingCoeff=0.1709;MQ=31.11;MQ0=79;MQRankSum=-6.024;QD=9.66;ReadPosRankSum=-1.774;VQSLOD=0.2217;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:13:27.08:417,27,0	1/1:3,0:2:6.02:110,6,0	./.	./.	0/1:10,0:9:9.18:9,0,172	0/1:8,5:9:31.19:153,0,31	1/1:15,0:7:15.05:221,15,0	1/1:14,1:1:3.01:58,3,0	0/1:5,0:4:10.57:103,0,11	0/0:14,0:12:7.03:0,7,539	0/0:7,0:4:9.03:0,9,183	0/1:9,0:6:22.58:147,0,23	1/1:8,0:5:12.04:171,12,0	0/1:8,0:6:14.91:31,0,15	0/0:21,0:17:37.30:0,37,543	0/0:21,0:14:17.58:0,18,379	0/1:36,0:28:91.41:91,0,373	1/1:14,0:7:15.01:189,15,0	0/1:16,2:4:15.46:88,0,15	0/1:4,3:6:46.35:46,0,75	1/1:5,0:2:3.01:53,3,0	0/1:10,0:7:28.55:29,0,173	1/1:10,0:6:13.59:165,14,0	1/1:8,1:7:5.79:90,6,0	1/1:10,0:8:17.59:181,18,0	0/0:13,0:5:15.02:0,15,198	1/1:6,8:10:8.90:132,9,0	0/0:14,0:10:10.90:0,11,196
chr10	103380158	.	CCA	C	568.83	PASS	AB=0.973;AC=31;AF=0.554;AN=56;BaseQRankSum=7.229;DP=328;FS=26.116;HRun=0;HaplotypeScore=45.4731;InbreedingCoeff=0.1136;MQ=35.80;MQ0=81;MQRankSum=-4.733;QD=2.26;ReadPosRankSum=-1.601;VQSLOD=-0.0592;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:12:16.59:104,17,0	1/1:2,0:2:5.93:39,6,0	0/0:8,0:3:5.67:0,6,27	0/0:7,0:2:0.47:0,0,1	0/1:9,0:8:2.62:3,0,38	0/1:13,0:9:8.12:45,0,8	1/1:14,0:7:12.68:76,13,0	1/1:16,0:1:2.94:18,3,0	0/1:5,0:4:10.91:19,0,11	0/1:11,2:12:11.39:11,0,233	0/0:8,0:5:11.96:0,12,121	0/1:9,0:6:5.86:43,0,6	1/1:8,0:5:11.77:74,12,0	0/0:7,0:5:3.83:0,4,20	0/0:18,0:14:20.47:0,20,166	0/1:20,0:13:24.70:25,0,122	0/1:32,1:25:44.96:45,0,125	1/1:12,0:5:11.47:69,11,0	0/1:19,0:5:4.08:11,0,4	0/1:7,0:6:7.34:7,0,32	1/1:4,0:1:1.25:3,1,0	0/1:9,1:7:12.36:12,0,42	1/1:8,0:4:6.78:39,7,0	1/1:8,0:6:4.64:28,5,0	0/1:8,0:6:10.08:25,0,10	0/0:13,0:5:6.92:0,7,40	1/1:14,0:10:6.75:37,7,0	0/0:15,0:11:16.69:0,17,140
chr10	103380373	.	C	CT	1288.34	PASS	AC=20;AF=0.400;AN=50;BaseQRankSum=-0.967;DP=251;FS=8.525;HRun=2;HaplotypeScore=40.7677;InbreedingCoeff=0.8025;MQ=48.20;MQ0=27;MQRankSum=-1.232;QD=19.23;ReadPosRankSum=2.783;VQSLOD=3.1211;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,10:16:25.39:275,25,0	1/1:1,3:4:9.50:123,10,0	0/0:17,0:6:5.79:0,6,42	./.	0/0:11,0:10:14.68:0,15,122	1/1:2,9:11:27.52:351,28,0	1/1:1,1:2:3.01:43,3,0	0/0:27,0:19:47.90:0,48,416	1/1:1,3:3:9.03:122,9,0	0/0:16,0:16:42.04:0,42,453	0/0:7,0:6:17.82:0,18,147	1/1:1,6:6:11.25:132,11,0	1/1:0,2:2:3.01:42,3,0	1/1:2,1:2:3.01:43,3,0	0/0:11,0:10:12.37:0,12,161	0/0:12,0:12:29.59:0,30,315	0/0:22,0:20:35.60:0,36,379	1/1:3,4:6:18.05:227,18,0	0/0:16,0:12:35.85:0,36,293	0/0:9,0:7:20.94:0,21,175	0/0:4,0:4:8.99:0,9,77	0/0:1,0:1:3.01:0,3,36	./.	./.	1/1:4,4:6:11.96:115,12,0	0/0:13,0:12:32.81:0,33,278	0/0:5,0:5:8.91:0,9,67	0/0:6,0:4:9:0,9,81
chr10	103380375	.	TAA	T	878.11	PASS	AB=0.710;AC=13;AF=0.250;AN=52;BaseQRankSum=-3.178;DP=256;FS=3.277;HRun=15;HaplotypeScore=41.8351;InbreedingCoeff=0.5017;MQ=50.84;MQ0=23;MQRankSum=-0.419;QD=9.44;ReadPosRankSum=1.277;VQSLOD=0.9749;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:41.92:0,42,411	0/0:4,0:4:11.99:0,12,117	0/0:16,0:7:7.79:0,8,62	./.	0/1:7,2:10:11.40:11,0,122	0/0:12,0:12:29.96:0,30,284	0/0:3,0:3:8.93:0,9,69	1/1:10,16:19:47.59:391,48,0	0/0:4,0:3:9.01:0,9,88	0/0:17,0:17:36.11:0,36,473	0/0:7,0:6:11.48:0,11,111	0/0:8,0:7:14.99:0,15,150	0/0:2,0:2:3.01:0,3,30	0/0:3,0:2:3.48:0,3,31	0/0:11,0:10:18:0,18,211	0/0:10,0:12:36.04:0,36,429	0/0:19,0:19:38.57:0,39,473	0/0:4,0:6:18.02:0,18,173	0/1:11,5:14:33.02:128,0,33	1/1:3,5:7:5.82:97,6,0	1/1:0,4:4:8.98:79,9,0	0/0:1,0:1:3.01:0,3,41	0/0:1,0:1:2.80:0,3,13	./.	0/0:5,0:6:11.96:0,12,98	1/1:5,8:12:23.93:211,24,0	0/1:2,3:5:11.21:44,0,11	1/1:3,3:4:9:79,9,0
chr10	103380453	.	A	AGGCACTG	14016.84	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=5.610;DP=325;FS=22.225;HRun=0;HaplotypeScore=90.3399;InbreedingCoeff=0.9437;MQ=85.98;MQ0=0;MQRankSum=-13.243;QD=85.47;ReadPosRankSum=0.441;VQSLOD=3.5184;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,9:18:33.11:1162,33,0	1/1:0,4:5:15.01:509,15,0	0/0:19,0:19:57.20:0,57,1415	0/0:9,0:9:24.08:0,24,564	0/0:12,0:12:30.10:0,30,736	1/1:5,2:7:6.02:245,6,0	1/1:10,7:17:48.08:1604,48,0	1/1:11,6:17:51.13:1876,51,0	1/1:1,6:6:18.06:708,18,0	0/0:15,0:15:45.15:0,45,1100	0/0:12,0:12:36.12:0,36,959	1/1:2,5:7:18.06:733,18,0	1/1:1,1:2:3.01:123,3,0	1/1:1,8:9:24.08:978,24,0	0/0:18,0:18:54.19:0,54,1394	0/0:15,0:15:45.15:0,45,1152	0/0:24,0:24:69.24:0,69,1808	1/1:3,2:6:15.05:581,15,0	1/1:2,8:11:30.10:1063,30,0	1/1:1,8:9:21.07:855,21,0	1/1:4,10:14:27.09:1050,27,0	0/0:9,0:9:24.08:0,24,621	1/1:3,6:9:18.06:734,18,0	1/1:3,6:9:16.92:650,17,0	1/1:4,6:10:15.05:613,15,0	0/0:22,0:22:63.22:0,63,1671	1/1:1,5:5:15.05:533,15,0	0/0:6,0:6:18.06:0,18,485
chr10	103380494	.	G	GT	3081.47	PASS	AB=0.951;AC=40;AF=0.714;AN=56;BaseQRankSum=8.763;DP=382;FS=6.825;HRun=12;HaplotypeScore=79.1892;InbreedingCoeff=0.3634;MQ=66.55;MQ0=1;MQRankSum=-4.652;QD=9.31;ReadPosRankSum=-2.335;VQSLOD=2.2996;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:56.06:382,56,0	1/1:4,0:4:5.50:26,5,0	0/0:10,0:8:16.70:0,17,113	0/1:7,0:8:0.53:4,0,1	0/1:12,1:13:8.37:8,0,110	1/1:9,0:9:20.73:141,21,0	1/1:25,0:25:61.41:382,61,0	1/1:26,0:26:59.47:308,59,0	1/1:7,0:7:17.60:111,18,0	0/1:11,0:11:10.44:10,0,127	0/1:12,0:12:6.90:7,0,91	1/1:12,0:12:32.17:198,32,0	1/1:6,0:6:17.52:105,18,0	1/1:9,0:9:17.77:126,18,0	0/0:19,0:19:38.70:0,39,283	0/0:14,0:14:23.59:0,24,175	0/1:29,5:34:62.42:62,0,415	1/1:7,0:7:20.49:124,20,0	1/1:19,0:19:39.93:211,40,0	0/1:5,0:5:13.33:17,0,13	1/1:22,0:22:55.61:354,56,0	0/1:9,0:9:11.33:11,0,71	1/1:11,0:11:17.63:111,18,0	1/1:21,0:21:46.86:292,47,0	1/1:9,0:9:23.25:139,23,0	0/1:17,2:19:22.57:23,0,129	1/1:8,0:8:17.60:110,18,0	0/0:8,0:8:8.87:0,9,66
chr10	103380497	.	T	TG	7199.50	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-2.279;DP=381;FS=18.978;HRun=0;HaplotypeScore=57.7668;InbreedingCoeff=0.9616;MQ=64.52;MQ0=1;MQRankSum=-8.311;QD=31.72;ReadPosRankSum=2.021;VQSLOD=3.3418;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:57.16:738,57,0	1/1:1,2:3:8.99:94,9,0	0/0:10,0:8:20.98:0,21,249	0/0:7,0:6:7.47:0,7,81	0/0:12,0:12:28.69:0,29,345	1/1:1,9:10:23.99:292,24,0	1/1:1,23:24:69.09:857,69,0	1/1:1,27:28:78.07:923,78,0	1/1:0,7:7:18.06:233,18,0	0/0:12,0:12:30.82:0,31,349	0/0:12,0:12:30.90:0,31,333	1/1:0,13:13:33.11:431,33,0	1/1:0,7:7:18.06:238,18,0	1/1:1,6:7:18.04:231,18,0	0/0:18,0:18:52.39:0,52,654	0/0:13,0:13:39.09:0,39,468	0/0:34,0:34:77.67:0,78,1079	1/1:0,8:8:21.07:277,21,0	1/1:6,11:17:33.68:567,34,0	1/1:3,1:4:7.37:91,7,0	1/1:1,23:24:61.01:761,61,0	0/0:8,0:8:22.28:0,22,233	1/1:2,8:10:23.94:268,24,0	1/1:1,19:20:48.14:632,48,0	1/1:0,10:10:24.08:316,24,0	0/0:20,0:20:47.84:0,48,542	1/1:1,8:9:21.02:252,21,0	0/0:8,0:8:24:0,24,247
chr10	103381769	.	CAG	C	17728.45	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=16.142;DP=707;FS=4.111;HRun=0;HaplotypeScore=103.3590;InbreedingCoeff=0.9998;MQ=87.59;MQ0=0;MQRankSum=-10.306;QD=43.99;ReadPosRankSum=1.730;VQSLOD=6.2351;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,45:45:99:1902,117,0	1/1:0,12:12:30.10:469,30,0	0/0:29,0:29:84.18:0,84,1636	0/0:27,0:27:81.27:0,81,1544	0/0:25,0:25:72.25:0,72,1461	1/1:3,22:25:75.26:1214,75,0	1/1:0,24:24:69.24:1120,69,0	1/1:0,25:25:75.21:1141,75,0	1/1:0,29:29:84.29:1365,84,0	0/0:26,0:26:78.27:0,78,1579	0/0:14,0:14:39.13:0,39,746	1/1:0,26:26:78.27:1269,78,0	1/1:0,21:21:54.18:880,54,0	1/1:4,10:14:39.13:626,39,0	0/0:44,0:44:99:0,123,2374	0/0:50,0:50:99:0,150,2964	0/0:37,0:37:99:0,111,2242	1/1:0,14:14:36.12:587,36,0	1/1:0,29:28:81.28:1300,81,0	1/1:0,13:13:36.12:586,36,0	1/1:0,44:44:99:1953,120,0	0/0:11,0:11:30.10:0,30,591	1/1:0,18:18:48.16:778,48,0	1/1:0,21:21:39.13:636,39,0	1/1:0,18:18:51.17:830,51,0	0/0:28,0:28:84.28:0,84,1664	1/1:0,25:25:66.23:1075,66,0	0/0:13,0:13:39.13:0,39,792
chr10	103381868	.	G	GCCCTAGATTTTGATC	61987.16	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=1.947;DP=768;FS=15.388;HRun=0;HaplotypeScore=311.6077;InbreedingCoeff=0.9987;MQ=62.49;MQ0=0;MQRankSum=-21.156;QD=142.17;ReadPosRankSum=-5.156;VQSLOD=3.0804;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:36,15:51:99:5483,99,0	1/1:7,3:9:21.07:1202,21,0	0/0:18,0:18:54.17:0,54,1970	0/0:14,0:14:36.12:0,36,1243	0/0:25,0:25:69.66:0,70,2835	1/1:9,14:24:63.22:4320,63,0	1/1:19,10:29:78.27:4088,78,0	1/1:29,3:36:99:4852,99,0	1/1:10,22:34:96.33:6325,96,0	0/0:33,0:33:93.31:0,93,3748	0/0:12,0:12:36.12:0,36,1302	1/1:11,11:25:60.21:3847,60,0	1/1:18,14:32:87.28:5423,87,0	1/1:9,14:26:69.24:4446,69,0	0/0:51,0:51:99:0,150,6438	0/0:71,0:71:69.94:0,70,8264	0/0:38,0:38:99:0,108,4387	1/1:7,4:11:27.06:1434,27,0	1/1:9,6:17:51.18:3054,51,0	1/1:7,13:22:63.17:3192,63,0	1/1:16,3:19:24.17:1153,24,0	0/0:34,0:34:99:0,99,4144	1/1:9,7:16:42.14:2051,42,0	1/1:15,11:26:31.75:1308,32,0	1/1:11,12:25:63.22:3556,63,0	0/0:25,0:25:72.25:0,72,2982	1/1:12,19:33:93.32:6256,93,0	0/0:11,0:11:27.09:0,27,1182
chr10	103382083	.	CGTTTGTTT	C	2484.85	PASS	AB=0.967;AC=18;AF=0.321;AN=56;BaseQRankSum=3.338;DP=518;FS=23.666;HRun=0;HaplotypeScore=164.9986;InbreedingCoeff=-0.3021;MQ=70.50;MQ0=2;MQRankSum=-0.375;QD=9.90;ReadPosRankSum=-3.400;VQSLOD=0.3805;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:99:132,0,374	0/1:7,0:7:47.47:47,0,78	0/0:25,0:21:42.39:0,42,727	0/0:23,0:17:28.85:0,29,679	0/0:23,0:23:66.22:0,66,2244	0/1:15,0:15:99:107,0,320	0/1:17,0:15:94.43:94,0,400	0/1:16,20:34:86.65:747,0,87	0/1:7,0:7:6.50:7,0,197	0/0:23,0:23:57.18:0,57,1768	0/0:11,0:11:30.10:0,30,1057	0/1:13,0:13:99:200,0,332	0/1:17,0:17:70.65:71,0,564	0/1:4,0:4:30.78:31,0,104	0/0:37,0:37:99:0,102,3352	0/0:33,0:33:84.24:0,84,2901	0/0:38,0:38:99:0,105,3451	0/1:20,0:18:96.93:97,0,243	0/1:15,0:14:99:215,0,171	0/1:16,0:16:99:309,0,261	1/1:7,0:6:12.02:143,12,0	0/0:16,0:16:38.98:0,39,1195	0/1:10,0:10:99:147,0,134	0/1:9,0:8:6.96:7,0,71	0/1:22,0:20:99:169,0,416	0/0:28,0:28:78.25:0,78,2702	0/1:12,0:12:99:126,0,181	0/0:10,0:10:30.10:0,30,960
chr10	103382087	.	TG	T	1905.73	PASS	AB=0.947;AC=22;AF=0.393;AN=56;BaseQRankSum=11.165;DP=535;FS=0.377;HRun=1;HaplotypeScore=106.7393;InbreedingCoeff=0.0791;MQ=62.99;MQ0=2;MQRankSum=-5.859;QD=6.88;ReadPosRankSum=-3.284;VQSLOD=-0.6838;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,2:22:48.05:133,0,48	1/1:7,1:7:8.45:78,8,0	0/0:22,0:17:34.46:0,34,502	0/0:19,0:13:32.65:0,33,388	0/0:22,0:22:66.19:0,66,958	0/1:18,1:18:40.28:144,0,40	0/1:16,0:14:69.74:70,0,94	1/1:38,1:36:9.63:411,10,0	0/1:7,1:8:32.66:33,0,80	0/0:24,0:24:63.86:0,64,889	0/0:10,0:10:30.10:0,30,451	0/1:17,0:17:86.70:111,0,87	0/1:18,1:19:63.85:96,0,64	0/1:7,0:6:10.95:11,0,41	0/0:36,0:36:99:0,105,1520	0/0:30,0:30:87.22:0,87,1255	0/0:39,0:39:83.27:0,83,1480	0/1:16,2:16:39.71:144,0,40	1/1:16,1:17:4.33:168,4,0	0/1:21,1:21:37.21:137,0,37	1/1:8,0:7:11.76:96,12,0	0/0:16,0:16:35.56:0,36,497	0/1:10,1:11:4.55:90,0,5	0/1:10,0:8:30.86:47,0,31	0/1:21,2:20:90.44:161,0,90	0/0:28,0:28:80.58:0,81,1154	1/1:12,0:12:24.78:159,25,0	0/0:12,0:11:30.09:0,30,433
chr10	103382090	.	TTG	T	2349.36	PASS	AB=0.956;AC=25;AF=0.446;AN=56;BaseQRankSum=9.491;DP=536;FS=18.399;HRun=0;HaplotypeScore=111.9071;InbreedingCoeff=0.3432;MQ=58.75;MQ0=2;MQRankSum=-8.475;QD=8.42;ReadPosRankSum=-5.039;VQSLOD=1.0908;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:24:21.36:222,21,0	0/1:6,0:5:1.69:60,0,2	0/0:19,0:14:36.67:0,37,297	0/0:17,0:11:23.57:0,24,233	0/0:24,0:24:68.81:0,69,853	0/1:17,2:18:4.75:228,0,5	1/1:15,0:13:4.18:179,4,0	0/1:42,1:40:34.15:309,0,34	0/1:7,1:8:8.90:81,0,9	0/0:24,0:24:69.14:0,69,848	0/0:13,0:13:33.04:0,33,448	1/1:18,0:18:10.12:284,10,0	0/1:18,1:19:19.12:163,0,19	1/1:7,0:6:5.25:47,5,0	0/0:37,0:37:99:0,101,1260	0/0:30,0:30:87.13:0,87,1216	0/0:37,0:37:99:0,100,1329	1/1:16,1:15:2.05:132,2,0	0/1:16,0:15:28.61:58,0,29	0/1:25,1:24:46:133,0,46	1/1:6,0:4:7.73:47,8,0	0/0:16,0:16:31.28:0,31,456	0/1:10,1:11:4.02:115,0,4	1/1:9,0:7:17.96:170,18,0	1/1:21,1:19:33.16:253,33,0	0/0:28,0:28:75.22:0,75,1030	0/1:13,0:13:28.13:56,0,28	0/0:12,0:11:32.10:0,32,307
chr10	103382091	.	TG	T	2473.25	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=14.267;DP=534;FS=3.202;HRun=1;HaplotypeScore=103.0218;InbreedingCoeff=0.9074;MQ=57.73;MQ0=3;MQRankSum=-11.071;QD=8.90;ReadPosRankSum=-4.792;VQSLOD=-0.6913;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:24:44.27:237,44,0	1/1:4,2:5:6.55:52,7,0	0/0:19,0:14:20.48:0,20,236	0/0:17,0:10:23.46:0,23,203	0/0:24,0:24:65.25:0,65,647	1/1:19,0:18:18.90:218,19,0	1/1:15,0:13:25.62:147,26,0	1/1:41,2:40:24.56:386,25,0	0/1:8,0:8:2.53:73,0,3	0/0:24,0:24:69.12:0,69,717	0/0:13,0:13:33:0,33,357	1/1:18,0:18:36.35:228,36,0	1/1:18,1:19:26.54:163,27,0	1/1:7,0:6:11.22:48,11,0	0/0:37,0:37:92.17:0,92,959	0/0:30,0:30:85.95:0,86,934	0/0:36,0:36:79.87:0,80,993	1/1:16,1:15:10.14:158,10,0	1/1:15,0:14:13.14:133,13,0	1/1:26,0:24:24.83:216,25,0	1/1:6,0:4:8.25:50,8,0	0/0:16,0:16:25.70:0,26,347	1/1:10,1:11:16.30:118,16,0	1/1:8,1:7:17.11:112,17,0	1/1:20,2:19:37.47:212,37,0	0/0:28,0:28:76.53:0,77,822	1/1:13,0:13:25.05:143,25,0	0/0:12,0:11:18.58:0,19,189
chr10	103382092	.	G	GTT	1840.22	PASS	AB=0.886;AC=30;AF=0.536;AN=56;BaseQRankSum=6.813;DP=538;FS=3.491;HRun=13;HaplotypeScore=119.6344;InbreedingCoeff=0.6238;MQ=57.24;MQ0=3;MQRankSum=-10.283;QD=6.53;ReadPosRankSum=-4.387;VQSLOD=0.1019;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:17,5:23:8.04:194,8,0	1/1:4,2:6:5.05:77,5,0	0/0:19,0:14:6.92:0,7,43	0/0:16,0:10:4.98:0,5,55	0/0:21,0:24:38.27:0,38,400	0/1:16,3:20:16.98:181,0,17	1/1:8,6:13:8.44:198,8,0	0/1:44,0:41:33.06:40,0,33	0/1:7,1:8:6.74:76,0,7	0/0:22,0:23:41.87:0,42,369	0/0:13,0:13:26.93:0,27,237	1/1:13,5:18:11.79:274,12,0	1/1:16,3:19:9.38:159,9,0	1/1:6,1:6:11.22:97,11,0	0/0:36,0:37:67.50:0,67,541	0/0:30,0:31:74.73:0,75,639	0/0:32,0:36:65.15:0,65,645	1/1:12,1:14:13.88:68,14,0	1/1:17,0:16:14.79:88,15,0	1/1:26,0:24:28.34:147,28,0	1/1:5,0:3:1.36:2,1,0	0/0:12,0:16:9.73:0,10,207	0/1:9,2:11:0.95:36,0,1	1/1:5,4:7:12.04:158,12,0	1/1:13,8:19:21.90:226,22,0	0/0:25,0:28:38.74:0,39,424	1/1:13,0:13:6.25:17,6,0	0/0:7,0:11:19.63:0,20,160
chr10	103383763	.	T	TAAA	8842.93	PASS	AB=0.555;AC=31;AF=0.554;AN=56;BaseQRankSum=8.370;DP=614;FS=0.000;HRun=11;HaplotypeScore=110.4112;InbreedingCoeff=0.7577;MQ=73.76;MQ0=0;MQRankSum=-2.202;QD=23.39;ReadPosRankSum=0.017;VQSLOD=3.5149;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,36:52:93.25:1662,93,0	1/1:2,7:10:25.90:455,26,0	0/0:20,0:18:6.69:0,7,171	0/0:14,0:13:14.89:0,15,151	0/0:21,0:22:48:0,48,544	1/1:6,19:27:57.16:963,57,0	1/1:5,16:23:38.70:640,39,0	0/1:8,0:30:20.23:111,0,20	1/1:5,12:19:4.04:577,4,0	0/0:40,0:40:87.06:0,87,1007	0/0:12,0:13:29.98:0,30,322	1/1:4,12:17:27.09:508,27,0	1/1:7,17:28:50.90:843,51,0	1/1:8,11:21:39.09:645,39,0	0/0:26,0:26:69.17:0,69,806	0/0:17,0:18:48.05:0,48,533	0/0:25,0:26:63.05:0,63,719	1/1:5,10:19:33.07:554,33,0	1/1:7,0:20:9.32:27,9,0	1/1:4,0:22:18.27:41,18,0	0/1:2,0:19:13.37:19,0,13	0/0:14,0:14:36.04:0,36,420	1/1:9,7:17:25.33:435,25,0	1/1:2,17:22:44.85:804,45,0	1/1:4,12:18:34.87:554,35,0	0/0:28,0:28:57.02:0,57,665	0/1:3,0:14:6.28:6,0,24	0/0:14,0:14:30.01:0,30,350
chr10	103384834	.	T	TC	18730.21	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-16.139;DP=768;FS=0.282;HRun=1;HaplotypeScore=68.8889;InbreedingCoeff=0.9998;MQ=81.63;MQ0=0;MQRankSum=-1.732;QD=39.27;ReadPosRankSum=0.320;VQSLOD=5.2881;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,41:42:99:1618,108,0	1/1:1,12:13:36.12:539,36,0	0/0:24,0:24:59.79:0,60,759	0/0:23,0:23:55.45:0,55,643	0/0:29,0:29:69.22:0,69,883	1/1:0,18:18:48.16:719,48,0	1/1:3,39:42:99:1618,108,0	1/1:3,38:41:99:1611,108,0	1/1:0,25:25:69.23:1033,69,0	0/0:25,0:25:72.22:0,72,921	0/0:18,0:18:36.05:0,36,446	1/1:1,24:25:66.18:964,66,0	1/1:0,29:29:87.24:1276,87,0	1/1:0,22:22:63.21:944,63,0	0/0:40,0:40:99:0,117,1519	0/0:35,1:36:57.52:0,58,1241	0/0:25,0:25:75.19:0,75,938	1/1:2,23:25:57.19:854,57,0	1/1:1,23:24:66.22:989,66,0	1/1:0,25:25:69.23:1026,69,0	1/1:0,47:47:99:1896,132,0	0/0:24,0:24:60.20:0,60,779	1/1:0,15:15:36.12:539,36,0	1/1:4,24:28:33.31:995,33,0	1/1:0,31:31:78.26:1167,78,0	0/0:35,0:35:99:0,102,1299	1/1:0,25:25:63.21:944,63,0	0/0:12,0:12:27.09:0,27,350
chr10	103384977	.	G	GGTGT	16274.48	PASS	AB=0.800;AC=34;AF=0.607;AN=56;BaseQRankSum=-3.220;DP=723;FS=12.155;HRun=0;HaplotypeScore=124.9255;InbreedingCoeff=0.8610;MQ=64.21;MQ0=3;MQRankSum=-3.782;QD=34.12;ReadPosRankSum=3.463;VQSLOD=4.4910;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,24:33:63.22:1567,63,0	1/1:0,9:9:15.05:373,15,0	0/0:37,0:27:46.51:0,47,766	0/0:25,0:18:25.47:0,25,363	0/0:18,0:18:36.12:0,36,603	0/1:12,16:28:5.45:999,0,5	1/1:12,22:36:48.16:1192,48,0	1/1:18,12:29:36.12:840,36,0	1/1:9,13:22:27.09:668,27,0	0/0:27,0:27:54.18:0,54,879	0/0:16,0:16:42.13:0,42,672	1/1:7,17:25:32.97:821,33,0	1/1:6,14:22:29.57:622,30,0	1/1:9,10:21:26.56:546,27,0	0/0:30,0:30:66.21:0,66,1083	0/1:26,1:27:23.26:23,0,750	0/0:35,0:35:63.20:0,63,1000	1/1:11,17:29:54.19:1341,54,0	1/1:10,7:18:24.08:557,24,0	1/1:8,13:22:42.14:1042,42,0	1/1:18,33:59:85.99:1883,86,0	0/0:24,0:24:57.19:0,57,951	1/1:7,13:21:32.99:819,33,0	1/1:4,21:27:53.65:1219,54,0	1/1:8,7:18:26.83:603,27,0	0/0:20,0:21:54.16:0,54,852	1/1:7,22:30:50.91:1161,51,0	0/0:13,0:13:15.05:0,15,253
chr10	103385483	.	CGGG	C	4973.77	PASS	AB=1.000;AC=25;AF=0.463;AN=54;BaseQRankSum=3.753;DP=392;FS=5.077;HRun=17;HaplotypeScore=98.1942;InbreedingCoeff=0.6725;MQ=71.04;MQ0=0;MQRankSum=-1.617;QD=22.30;ReadPosRankSum=6.935;VQSLOD=3.8700;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,21:29:55.24:559,55,0	1/1:2,6:8:17.72:173,18,0	0/0:22,0:10:11.92:0,12,114	0/1:7,0:6:14.47:24,0,14	0/0:4,0:4:3.01:0,3,34	1/1:8,15:23:49.58:520,50,0	1/1:6,11:17:31.26:335,31,0	0/0:14,0:13:3.47:0,3,26	1/1:3,13:16:32.36:337,32,0	0/0:6,0:6:0:0,0,0	0/0:6,0:6:3.01:0,3,50	1/1:5,16:21:49.37:521,49,0	1/1:4,16:20:47.32:491,47,0	1/1:0,20:20:57.13:584,57,0	0/0:12,0:12:6.26:0,6,83	0/0:17,0:17:12.02:0,12,150	0/0:10,0:10:9.03:0,9,116	1/1:5,19:24:52.80:551,53,0	0/0:16,0:16:6.39:0,6,43	0/0:7,0:7:0:0,0,0	0/0:26,0:27:29.17:0,29,250	./.	1/1:2,4:6:8.86:91,9,0	1/1:0,16:16:45.10:461,45,0	1/1:4,12:16:32.40:326,32,0	0/0:4,0:4:0:0,0,0	0/0:19,0:19:2.92:0,3,30	0/0:2,0:2:3.01:0,3,49
chr10	103385485	.	G	GT	3773.19	PASS	AC=34;AF=0.630;AN=54;BaseQRankSum=2.120;DP=380;FS=42.614;HRun=0;HaplotypeScore=98.5625;InbreedingCoeff=0.8288;MQ=72.38;MQ0=0;MQRankSum=-3.236;QD=12.37;ReadPosRankSum=5.047;VQSLOD=2.2978;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:52.52:309,53,0	1/1:9,0:9:18.74:93,19,0	0/0:23,0:10:6.70:0,7,110	0/0:11,0:9:4.26:0,4,46	0/0:4,0:4:2.92:0,3,17	1/1:22,2:24:42.75:265,43,0	1/1:17,0:17:45.39:237,45,0	1/1:14,2:15:25.52:203,26,0	1/1:16,0:16:36.90:197,37,0	0/0:4,0:4:11.98:0,12,104	0/0:4,0:4:6:0,6,51	1/1:23,0:23:51.32:274,51,0	1/1:19,0:19:51.53:256,52,0	1/1:20,0:20:45.97:202,46,0	0/0:8,0:8:8.03:0,8,44	0/0:9,0:9:12.25:0,12,77	0/0:7,0:7:14.94:0,15,119	1/1:24,0:24:68.90:382,69,0	1/1:14,2:16:33.18:278,33,0	1/1:7,0:7:11.90:91,12,0	1/1:22,7:29:59.11:452,59,0	./.	1/1:7,0:7:12.84:67,13,0	1/1:16,0:16:40.27:188,40,0	1/1:16,0:16:41.32:222,41,0	0/0:3,0:3:5.99:0,6,50	1/1:3,16:19:7.44:59,7,0	0/0:1,0:1:3:0,3,26
chr10	103386926	.	T	TGTGTGCGTGCGTGCGTGTATGTGTGC	29630.63	PASS	AB=0.649;AC=21;AF=0.375;AN=56;BaseQRankSum=3.333;DP=772;FS=4.834;HRun=0;HaplotypeScore=398.8040;InbreedingCoeff=0.7316;MQ=68.15;MQ0=0;MQRankSum=-15.571;QD=82.77;ReadPosRankSum=5.543;VQSLOD=2.7458;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:40:0.07:1850,0,0	1/1:8,0:17:21.54:2219,22,0	0/0:17,0:16:41.16:0,41,1507	0/0:23,0:23:59.73:0,60,1816	0/0:25,0:25:69.22:0,69,3658	0/1:13,0:27:5.93:1187,0,6	1/1:20,0:34:39.11:2914,39,0	0/0:26,0:26:75.24:0,75,3241	1/1:10,0:33:41.96:4338,42,0	0/0:32,0:32:93.31:0,93,5392	0/0:12,0:12:30.10:0,30,1694	0/1:10,0:27:44.91:1130,0,45	1/1:16,0:38:51.18:5303,51,0	1/1:14,1:33:30.10:3283,30,0	0/0:32,0:32:93.25:0,93,4745	0/0:25,0:25:75.23:0,75,4344	0/0:46,0:46:99:0,138,7085	1/1:14,0:32:46.52:3131,47,0	0/0:19,0:19:57.20:0,57,2488	0/0:19,0:19:57.18:0,57,3152	0/0:52,0:52:99:0,147,7522	0/0:26,0:26:72.25:0,72,4239	1/1:3,0:19:14.98:1668,15,0	1/1:11,0:31:7.24:696,7,0	0/1:14,0:27:17.91:1913,0,18	0/0:22,0:22:66.23:0,66,3519	0/0:31,0:30:93.18:0,93,5163	0/0:7,0:7:17.98:0,18,540
chr10	103388897	.	CCG	C	6633.76	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=10.627;DP=415;FS=6.352;HRun=0;HaplotypeScore=51.6911;InbreedingCoeff=0.9751;MQ=80.28;MQ0=2;MQRankSum=-1.530;QD=35.47;ReadPosRankSum=5.379;VQSLOD=6.8556;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:36.12:529,36,0	1/1:0,5:5:15.05:221,15,0	0/0:12,0:12:30.05:0,30,523	0/0:9,0:9:7.91:0,8,275	0/0:8,0:8:21.05:0,21,350	1/1:0,15:14:33.11:486,33,0	1/1:0,19:19:51.17:748,51,0	0/0:17,0:17:47.95:0,48,712	1/1:0,16:16:33.10:485,33,0	0/0:11,0:11:32.95:0,33,472	0/0:7,0:7:18.06:0,18,329	1/1:0,25:25:63.21:923,63,0	1/1:0,8:8:18.06:265,18,0	1/1:0,18:18:48.16:706,48,0	0/0:13,0:13:39.13:0,39,700	0/0:10,0:10:27.08:0,27,463	0/0:35,0:35:99:0,105,1846	1/1:1,26:26:69.22:994,69,0	0/0:14,0:14:38.99:0,39,606	0/0:12,0:12:32.96:0,33,466	0/0:33,0:33:93.27:0,93,1605	0/0:3,0:3:9.03:0,9,164	1/1:1,9:10:17.99:264,18,0	1/1:1,14:15:36.12:529,36,0	1/1:1,12:13:33.11:485,33,0	0/0:17,0:17:48.03:0,48,687	0/0:17,0:17:51.17:0,51,919	0/0:10,0:10:30.10:0,30,547
chr10	103389267	.	CAA	C	5169.97	PASS	AB=0.923;AC=25;AF=0.446;AN=56;BaseQRankSum=11.316;DP=495;FS=12.138;HRun=11;HaplotypeScore=77.7954;InbreedingCoeff=0.8703;MQ=73.64;MQ0=2;MQRankSum=1.202;QD=21.91;ReadPosRankSum=6.129;VQSLOD=2.7443;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,42:50:99:1333,129,0	1/1:1,6:7:15.03:160,15,0	0/1:11,1:12:38.82:39,0,116	0/0:9,1:8:5.93:0,6,63	0/0:15,1:16:7.18:0,7,481	1/1:3,21:23:54.13:575,54,0	1/1:5,15:23:26.70:378,27,0	0/0:11,0:26:40.52:0,41,150	1/1:1,10:12:29.81:299,30,0	0/0:14,0:14:33.07:0,33,438	0/0:13,0:13:39.13:0,39,599	1/1:0,23:23:54.14:575,54,0	1/1:1,6:7:14.85:141,15,0	1/1:3,9:13:9.19:235,9,0	0/0:23,0:23:63.20:0,63,942	0/0:20,0:20:57.18:0,57,856	0/0:35,0:35:98.81:0,99,1459	1/1:2,13:15:24.06:254,24,0	0/0:8,0:18:31.06:0,31,136	0/0:1,0:8:14.97:0,15,51	0/0:6,0:26:46.33:0,46,247	0/0:3,0:3:9.03:0,9,138	1/1:2,4:6:9.01:96,9,0	1/1:2,22:24:60.13:639,60,0	1/1:3,16:19:42.09:447,42,0	0/0:17,0:17:39.12:0,39,577	0/0:4,0:17:32.91:0,33,113	0/0:13,0:13:30.10:0,30,461
chr10	103390308	.	GCTGAGCCCTGTTGTTACCCC	G	7946.87	PASS	AB=0.786;AC=29;AF=0.580;AN=50;BaseQRankSum=10.015;DP=424;FS=7.200;HRun=0;HaplotypeScore=226.3717;InbreedingCoeff=0.7689;MQ=85.04;MQ0=0;MQRankSum=-9.325;QD=32.57;ReadPosRankSum=3.302;VQSLOD=2.9703;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,11:29:5.50:477,6,0	./.	0/0:15,0:15:24.08:0,24,836	0/0:17,0:17:33.11:0,33,1970	0/0:4,0:4:6.02:0,6,508	1/1:5,8:13:12.04:642,12,0	1/1:18,8:26:4.34:319,4,0	./.	1/1:6,9:15:18.06:965,18,0	0/0:21,0:21:45.15:0,45,3676	./.	1/1:14,11:25:11.87:643,12,0	1/1:6,3:9:9.03:483,9,0	1/1:11,5:16:2.84:161,3,0	0/0:17,0:17:48.15:0,48,3614	0/0:16,0:16:39.13:0,39,3075	0/0:28,0:28:60.18:0,60,4633	1/1:19,10:29:21.07:1126,21,0	1/1:9,4:13:12.01:504,12,0	1/1:1,3:4:6.02:216,6,0	0/1:16,6:22:12.22:43,0,12	0/0:14,0:14:30.10:0,30,2342	1/1:3,3:6:12.04:477,12,0	1/1:16,8:24:13.29:766,13,0	1/1:3,5:8:15.05:804,15,0	0/0:30,0:30:63.22:0,63,5196	1/1:2,3:5:6.02:322,6,0	0/0:5,0:5:15.05:0,15,1142
chr10	103390526	.	C	CT	2420.75	PASS	AB=1.000;AC=31;AF=0.574;AN=54;BaseQRankSum=13.710;DP=393;FS=1.924;HRun=2;HaplotypeScore=124.6325;InbreedingCoeff=0.8905;MQ=69.05;MQ0=0;MQRankSum=-13.691;QD=9.88;ReadPosRankSum=0.589;VQSLOD=1.5962;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,2:29:48.85:300,49,0	./.	0/0:8,0:8:15.05:0,15,184	0/0:9,0:9:18.01:0,18,198	0/0:14,0:14:39.05:0,39,483	1/1:15,0:15:34.37:177,34,0	1/1:15,2:17:40.20:255,40,0	1/1:16,0:16:40.94:270,41,0	1/1:11,2:13:28.77:177,29,0	0/0:19,0:19:54.15:0,54,652	0/0:4,0:4:9.03:0,9,112	1/1:17,0:17:28.61:144,29,0	1/1:11,0:11:28.52:141,29,0	1/1:20,1:21:48.15:233,48,0	0/0:18,0:18:54.17:0,54,662	0/0:10,0:10:27.06:0,27,310	0/0:34,0:34:99:0,102,1265	1/1:19,0:19:40.31:217,40,0	1/1:10,0:10:26.36:164,26,0	1/1:4,0:4:11.52:62,12,0	1/1:30,2:32:30.49:193,30,0	0/0:9,0:9:27.08:0,27,335	1/1:11,0:11:11.58:63,12,0	0/1:11,0:11:24.28:24,0,26	1/1:10,0:10:22.84:141,23,0	0/0:19,0:19:54.05:0,54,638	1/1:9,0:8:14.45:77,14,0	0/0:3,0:3:9.03:0,9,112
chr10	103390528	.	TCACGCGGCC	T	14302.10	PASS	AB=0.524;AC=31;AF=0.574;AN=54;BaseQRankSum=13.967;DP=363;FS=1.360;HRun=0;HaplotypeScore=131.3912;InbreedingCoeff=0.9040;MQ=72.55;MQ0=0;MQRankSum=-14.335;QD=66.83;ReadPosRankSum=1.280;VQSLOD=4.6303;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:48.11:1400,48,0	./.	0/0:9,0:9:21.07:0,21,641	0/0:9,0:9:17.94:0,18,623	0/0:14,0:14:39.13:0,39,1735	1/1:0,13:14:39.13:1190,39,0	1/1:2,14:16:39.13:1167,39,0	1/1:2,13:15:36.06:1061,36,0	1/1:3,9:12:27.09:802,27,0	0/0:19,0:19:57.20:0,57,2625	0/0:3,0:3:9.03:0,9,354	1/1:1,16:17:30.10:948,30,0	1/1:0,11:11:30.10:948,30,0	1/1:1,18:19:51.18:1611,51,0	0/0:18,0:18:54.19:0,54,2598	0/0:10,0:10:30.08:0,30,1259	0/0:34,0:34:99:0,102,5159	1/1:0,15:15:42.14:1321,42,0	1/1:2,7:9:21.07:664,21,0	1/1:0,4:4:12.04:379,12,0	1/1:3,20:23:36.13:816,36,0	0/0:9,0:9:27.09:0,27,1287	1/1:0,10:10:21.07:514,21,0	0/1:1,10:11:99:282,0,137	1/1:0,8:8:24.08:704,24,0	0/0:19,0:19:57.19:0,57,2629	1/1:0,8:8:18.02:494,18,0	0/0:5,0:5:15.05:0,15,608
chr10	103391223	.	CCACGGGCTCTTCAG	C	5758.38	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.682;DP=559;FS=6.107;HRun=0;HaplotypeScore=213.5974;InbreedingCoeff=0.9908;MQ=85.93;MQ0=0;MQRankSum=-8.575;QD=61.26;ReadPosRankSum=-0.830;VQSLOD=3.8597;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.33:0,96,5958	0/0:10,0:10:27.05:0,27,1573	0/0:21,0:21:63.22:0,63,3330	0/0:19,0:19:57.20:0,57,3175	0/0:19,0:19:54.19:0,54,3794	0/0:13,0:13:39.12:0,39,2436	0/0:25,0:25:75.22:0,75,4732	1/1:10,7:17:21.04:629,21,0	0/0:20,0:20:54.19:0,54,3619	0/0:21,0:21:57.20:0,57,3770	0/0:4,0:4:12.03:0,12,569	0/0:22,0:22:63.20:0,63,4094	0/0:18,0:18:54.19:0,54,3602	0/0:19,0:19:57.19:0,57,3536	0/0:16,0:16:48.16:0,48,2869	0/0:18,0:18:51.17:0,51,3416	0/0:47,0:47:99:0,138,8947	0/0:40,0:40:99:0,111,6903	1/1:5,15:20:45.14:1705,45,0	1/1:1,13:14:33.07:1119,33,0	1/1:7,19:26:30.49:1040,30,0	0/0:16,0:16:45.15:0,45,2918	0/0:11,0:11:33.11:0,33,2247	0/0:24,0:24:69.19:0,69,4058	0/0:16,0:16:48.16:0,48,3186	0/0:23,0:23:69.24:0,69,4723	1/1:4,13:17:30.57:1266,31,0	0/0:8,0:8:24.08:0,24,1536
chr10	103391432	.	GGGCGTGGAGTTGGT	G	10266.58	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=13.282;DP=450;FS=2.189;HRun=0;HaplotypeScore=179.7065;InbreedingCoeff=0.9626;MQ=85.00;MQ0=0;MQRankSum=-13.492;QD=62.22;ReadPosRankSum=3.758;VQSLOD=4.4020;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,9:20:18.06:640,18,0	1/1:1,2:3:6.02:242,6,0	0/0:17,0:17:18.04:0,18,585	0/0:18,0:18:39.04:0,39,1460	0/0:13,0:13:33.11:0,33,1561	1/1:2,10:12:27.09:1087,27,0	1/1:8,8:16:24.08:966,24,0	0/0:24,0:24:45.15:0,45,2559	1/1:2,16:18:45.15:1812,45,0	0/0:19,0:19:54.19:0,54,3370	0/0:13,0:13:33.11:0,33,2089	1/1:6,12:18:30.10:1208,30,0	1/1:7,7:14:24.08:966,24,0	1/1:6,10:16:27.09:1087,27,0	0/0:10,0:10:27.09:0,27,1708	0/0:20,0:20:57.18:0,57,3386	0/0:22,0:22:60.21:0,60,3979	1/1:6,7:13:16.30:654,16,0	0/0:24,0:24:39.13:0,39,2250	0/0:17,0:17:30.10:0,30,1909	0/0:27,0:27:66.23:0,66,4238	0/0:11,0:11:30.10:0,30,1690	1/1:6,3:9:6.02:190,6,0	1/1:9,7:15:15.05:572,15,0	1/1:2,8:10:21.07:845,21,0	0/0:18,0:18:42.14:0,42,2227	0/0:12,0:12:36.12:0,36,2180	0/0:20,0:20:42.12:0,42,2437
chr10	103392737	.	G	GGGTACGGCAGGGTAGTCTAGGAAG	2204.68	PASS	AB=0.714;AC=33;AF=0.971;AN=34;BaseQRankSum=-2.706;DP=39;FS=6.340;HRun=0;HaplotypeScore=31.9630;InbreedingCoeff=-0.1910;MQ=150.80;MQ0=0;MQRankSum=-1.570;QD=62.99;ReadPosRankSum=-1.570;VQSLOD=1.1293;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:3.01:48,3,0	1/1:1,0:1:3.01:42,3,0	1/1:3,0:8:17.02:992,17,0	0/1:3,1:5:36.53:630,0,37	1/1:1,0:1:2.97:20,3,0	./.	1/1:1,0:1:3.01:40,3,0	1/1:2,0:2:6:53,6,0	1/1:1,0:1:3.01:50,3,0	./.	1/1:2,0:2:5.96:45,6,0	1/1:2,0:2:2.97:20,3,0	1/1:1,0:1:3:25,3,0	./.	1/1:2,0:2:5.98:70,6,0	1/1:1,0:1:3.01:40,3,0	./.	./.	./.	./.	1/1:1,0:1:2.99:23,3,0	1/1:2,0:2:3:25,3,0	./.	./.	1/1:1,0:1:3.01:42,3,0	1/1:1,0:1:3.01:123,3,0	./.	./.
chr10	103395079	.	A	AC	1967.83	PASS	AB=0.529;AC=9;AF=0.161;AN=56;BaseQRankSum=-2.945;DP=376;FS=0.000;HRun=7;HaplotypeScore=49.8828;InbreedingCoeff=0.8409;MQ=93.97;MQ0=0;MQRankSum=-4.314;QD=25.56;ReadPosRankSum=0.049;VQSLOD=3.7624;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:51.08:0,51,492	0/0:2,0:2:6.01:0,6,58	0/0:17,0:17:23.99:0,24,220	0/0:20,0:20:39.05:0,39,377	0/0:9,0:9:24.04:0,24,232	0/0:17,0:16:48.07:0,48,459	0/0:17,0:16:42.01:0,42,396	1/1:1,9:10:21.02:227,21,0	0/0:7,0:7:21.03:0,21,203	0/0:18,0:18:51.08:0,51,492	0/0:17,0:17:33.02:0,33,311	0/0:10,0:10:27.04:0,27,261	0/0:14,0:14:36.05:0,36,347	0/0:15,0:15:42.03:0,42,397	0/0:15,0:15:45.06:0,45,429	0/0:17,0:17:45.06:0,45,430	0/0:6,0:6:9.01:0,9,87	0/0:9,0:9:21.03:0,21,203	1/1:5,10:15:36.08:418,36,0	0/1:1,8:9:7.91:196,0,8	1/1:1,23:24:57.17:688,57,0	0/0:6,0:6:18.03:0,18,174	0/0:10,0:10:30.05:0,30,289	0/0:14,0:14:36.06:0,36,348	0/0:12,0:12:33.06:0,33,324	0/0:18,0:18:54.09:0,54,521	1/1:2,17:19:51.14:602,51,0	0/0:7,0:7:14.74:0,15,139
chr10	103395131	.	C	CTA	3948.05	PASS	AB=0.994;AC=22;AF=0.393;AN=56;BaseQRankSum=-3.734;DP=493;FS=10.817;HRun=0;HaplotypeScore=71.3263;InbreedingCoeff=0.1609;MQ=61.30;MQ0=18;MQRankSum=-0.663;QD=14.05;ReadPosRankSum=-1.193;VQSLOD=2.4210;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:11.32:231,0,11	0/1:5,0:5:3.70:32,0,4	0/0:31,0:9:17.03:0,17,168	0/0:34,0:6:8.98:0,9,83	0/0:19,0:19:39.98:0,40,380	0/1:20,0:20:23.94:184,0,24	0/1:19,0:17:16.06:166,0,16	1/1:4,23:27:68.85:620,69,0	0/1:11,0:11:16.86:74,0,17	0/0:21,0:21:56.96:0,57,561	0/0:19,0:19:53.92:0,54,505	0/1:15,0:15:56.20:65,0,56	0/1:16,0:16:37:59,0,37	0/1:15,0:14:1.40:154,0,1	0/0:23,0:23:60.05:0,60,740	0/0:16,0:16:36.02:0,36,442	0/0:15,0:15:31.95:0,32,377	0/1:16,0:16:33.22:98,0,33	1/1:9,3:11:27:293,27,0	1/1:11,5:16:33.04:460,33,0	1/1:22,5:25:40.20:629,40,0	0/0:11,0:11:8.65:0,9,244	0/1:13,1:14:12.47:135,0,12	0/1:12,0:12:28.31:60,0,28	0/1:12,0:12:17.25:49,0,17	0/0:18,0:17:47.94:0,48,468	1/1:17,6:23:40.46:638,40,0	0/0:5,0:5:11.96:0,12,94
chr10	103395132	.	TAC	T	206.21	PASS	AB=0.905;AC=13;AF=0.232;AN=56;BaseQRankSum=1.030;DP=499;FS=3.192;HRun=0;HaplotypeScore=84.1760;InbreedingCoeff=-0.3154;MQ=61.19;MQ0=18;MQRankSum=1.431;QD=1.01;ReadPosRankSum=-0.642;VQSLOD=1.6708;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:1.55:2,0,183	0/1:4,2:6:48.75:57,0,49	0/0:31,0:9:3.48:0,3,42	0/0:35,0:7:3.01:0,3,40	0/1:16,3:19:15.32:15,0,194	0/1:19,1:20:33.70:34,0,243	0/0:18,0:16:21.05:0,21,217	0/0:27,0:27:15.04:0,15,171	0/1:11,0:11:13.35:13,0,146	0/0:22,0:22:18.06:0,18,260	0/0:20,0:20:20.91:0,21,261	0/1:15,1:16:0.30:0,0,288	0/1:16,0:16:3.26:3,0,247	0/1:14,1:14:6.46:6,0,122	0/1:21,2:23:18.61:19,0,582	0/0:15,0:15:21.91:0,22,320	0/1:11,4:15:66.55:67,0,325	0/1:15,2:17:36.46:36,0,224	0/0:12,0:11:6:0,6,55	0/0:16,0:16:21.03:0,21,206	0/0:28,0:26:33.06:0,33,331	0/0:9,0:11:12.03:0,12,162	0/0:13,0:14:6.90:0,7,169	0/1:11,1:13:32.93:33,0,158	0/1:9,2:11:56.76:57,0,131	0/0:18,0:17:0.99:0,1,162	0/0:22,0:22:42.08:0,42,443	0/0:6,0:6:2.99:0,3,24
chr10	103395244	.	G	GTC	806.70	PASS	AB=0.964;AC=19;AF=0.396;AN=48;BaseQRankSum=-0.431;DP=685;FS=3.449;HRun=0;HaplotypeScore=96.0017;InbreedingCoeff=0.0568;MQ=62.00;MQ0=12;MQRankSum=0.307;QD=2.65;ReadPosRankSum=2.760;VQSLOD=1.9511;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:41:18.58:19,0,25	1/1:6,0:6:2.88:23,3,0	./.	./.	0/0:17,0:17:5.60:0,6,40	0/1:22,0:22:13.07:24,0,13	0/0:26,0:24:11.24:0,11,64	./.	0/1:26,0:25:61.88:62,0,67	0/0:17,0:17:15.08:0,15,118	0/0:19,0:19:3.65:0,4,76	0/1:21,0:21:90.34:96,0,90	0/1:16,0:16:57.12:67,0,57	0/0:29,0:29:15.27:0,15,104	0/0:30,0:30:27.77:0,28,280	0/0:24,0:28:13.11:0,13,113	0/1:13,9:22:23.11:79,0,23	0/1:25,0:25:31.66:32,0,53	1/1:18,0:16:9.02:101,9,0	1/1:16,0:15:3:26,3,0	1/1:32,0:30:20.97:181,21,0	0/0:20,0:21:13.54:0,14,145	0/0:8,0:8:2.98:0,3,21	0/0:42,0:41:3.98:0,4,123	0/1:12,0:12:9.37:14,0,9	0/1:25,1:22:45.63:46,0,60	1/1:20,0:20:21.03:195,21,0	./.
chr10	103395290	.	CTT	C	3963.24	PASS	AB=0.965;AC=26;AF=0.464;AN=56;BaseQRankSum=-1.058;DP=556;FS=3.968;HRun=3;HaplotypeScore=84.1617;InbreedingCoeff=0.3275;MQ=56.04;MQ0=8;MQRankSum=-0.258;QD=11.13;ReadPosRankSum=-0.220;VQSLOD=0.4322;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:38,1:38:9.79:262,10,0	1/1:4,0:4:11.98:98,12,0	0/0:33,0:20:3.82:0,4,346	0/1:38,0:21:16.94:17,0,138	0/0:7,0:7:14.60:0,15,126	1/1:17,0:16:23.35:299,23,0	1/1:23,2:23:31.81:397,32,0	1/1:20,0:19:51.83:434,52,0	0/1:17,3:20:13.16:309,0,13	0/0:14,0:14:22.74:0,23,327	0/0:13,0:13:15.66:0,16,212	0/1:21,2:23:28.12:331,0,28	0/1:17,0:17:30.18:198,0,30	0/1:18,0:18:34.91:192,0,35	0/0:39,0:39:99:0,103,1157	0/0:23,0:23:39.78:0,40,446	0/0:24,0:24:51.03:0,51,513	0/1:21,1:22:27.05:164,0,27	1/1:12,0:12:16.94:218,17,0	0/0:1,4:5:0.47:0,0,1	1/1:28,0:28:32.96:263,33,0	0/0:21,0:21:30.36:0,30,354	0/1:3,0:3:10.04:41,0,10	0/1:35,1:36:24.39:304,0,24	1/1:7,0:7:0.27:73,0,0	0/0:17,0:15:26.25:0,26,393	1/1:27,0:27:42.28:364,42,0	0/0:4,0:3:5.98:0,6,48
chr10	103395292	.	T	TCTC	422.50	PASS	AB=0.967;AC=10;AF=0.179;AN=56;BaseQRankSum=1.542;DP=546;FS=1.936;HRun=0;HaplotypeScore=108.6666;InbreedingCoeff=-0.0437;MQ=56.32;MQ0=7;MQRankSum=-0.355;QD=2.20;ReadPosRankSum=-3.879;VQSLOD=1.2263;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:39:46.65:47,0,147	0/0:4,0:4:8.30:0,8,39	0/0:36,0:20:36.05:0,36,778	0/0:39,0:22:47.97:0,48,602	0/0:5,0:5:15.04:0,15,231	0/0:17,0:16:34.42:0,34,194	0/0:24,0:23:27.45:0,27,249	0/0:21,0:20:46.24:0,46,216	0/0:20,0:20:38.08:0,38,225	0/0:14,0:14:36.06:0,36,524	0/0:11,0:11:27.05:0,27,389	0/1:23,0:23:90.27:90,0,158	0/1:17,0:18:26.05:26,0,148	0/1:18,0:18:3.60:4,0,199	0/0:37,0:37:99:0,105,1835	0/0:21,0:21:48.14:0,48,765	0/0:22,0:22:51.04:0,51,829	0/1:20,0:20:7.45:7,0,161	0/1:11,0:12:31.24:31,0,42	1/1:4,1:5:3.01:47,3,0	0/1:30,0:30:36.55:189,0,37	0/0:18,0:18:45.49:0,45,651	0/0:3,0:3:8.59:0,9,51	0/0:35,0:35:25.43:0,25,280	0/0:7,0:7:17.34:0,17,103	0/0:17,0:16:43.86:0,44,617	0/1:22,3:26:99:118,0,136	0/0:3,0:2:6.02:0,6,110
chr10	103395446	.	G	GTTT	2575.70	PASS	AB=0.591;AC=28;AF=0.500;AN=56;BaseQRankSum=12.874;DP=647;FS=7.353;HRun=4;HaplotypeScore=132.7928;InbreedingCoeff=0.5537;MQ=65.78;MQ0=1;MQRankSum=-1.138;QD=7.06;ReadPosRankSum=-1.102;VQSLOD=-0.5707;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:28:0.62:68,0,1	1/1:1,1:13:20.62:174,21,0	0/0:19,0:11:4.90:0,5,273	0/0:15,0:13:24.05:0,24,366	0/0:33,0:33:92.72:0,93,1488	0/1:3,1:15:7.59:72,0,8	0/1:6,0:16:21.23:63,0,21	1/1:11,16:30:39.52:393,40,0	1/1:16,0:25:2.90:125,3,0	0/0:35,0:35:99:0,99,1629	0/0:23,0:23:48.78:0,49,1015	1/1:11,0:23:21.60:179,22,0	1/1:4,0:14:10.23:57,10,0	1/1:7,0:23:3.78:91,4,0	0/0:28,0:28:73.82:0,74,1180	0/0:25,0:25:63.21:0,63,1066	0/0:31,0:31:93.30:0,93,1574	0/1:7,0:19:12.40:134,0,12	1/1:7,0:18:15.53:246,16,0	1/1:9,14:25:17.41:413,17,0	1/1:7,13:22:15.58:133,16,0	0/0:24,0:24:50.62:0,51,1130	1/1:9,0:20:24.66:158,25,0	0/1:8,1:30:21.37:150,0,21	0/1:6,1:14:7.52:49,0,8	0/0:26,0:26:78.26:0,78,1324	1/1:8,13:21:17:274,17,0	0/0:23,0:23:65.67:0,66,1075
chr10	103395447	.	G	GT	3920.98	PASS	AB=0.918;AC=38;AF=0.679;AN=56;BaseQRankSum=10.973;DP=637;FS=11.065;HRun=13;HaplotypeScore=102.8079;InbreedingCoeff=0.6301;MQ=64.70;MQ0=1;MQRankSum=-1.009;QD=8.64;ReadPosRankSum=-2.272;VQSLOD=1.1825;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:23.03:274,23,0	1/1:14,0:14:21.78:113,22,0	0/0:18,0:10:4.39:0,4,60	0/1:16,0:13:10.09:10,0,33	0/1:30,3:34:10.99:11,0,362	1/1:16,0:16:9.19:142,9,0	1/1:14,0:14:1.54:132,2,0	1/1:34,0:28:30:192,30,0	1/1:25,0:25:38.81:355,39,0	0/0:35,0:35:30.88:0,31,339	0/0:21,2:23:23.95:0,24,306	1/1:22,0:22:46.90:369,47,0	1/1:13,0:13:17.69:138,18,0	1/1:22,0:22:24.13:263,24,0	0/0:27,0:27:46.14:0,46,303	0/1:20,5:25:41.92:42,0,185	0/0:23,1:30:46.80:0,47,415	1/1:19,0:19:20.57:341,21,0	1/1:18,0:15:17.06:86,17,0	1/1:26,0:25:33.81:228,34,0	1/1:21,0:21:14.34:79,14,0	0/0:23,0:23:42.99:0,43,302	1/1:20,0:20:46.30:362,46,0	1/1:30,0:31:43.10:511,43,0	1/1:14,0:14:10.78:161,11,0	0/0:25,0:26:61.48:0,61,416	1/1:20,0:20:20.05:106,20,0	0/1:20,2:23:6.19:6,0,244
chr10	103397625	.	T	TG	15356.17	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-14.636;DP=656;FS=1.782;HRun=4;HaplotypeScore=55.7484;InbreedingCoeff=0.9947;MQ=58.87;MQ0=3;MQRankSum=3.127;QD=35.06;ReadPosRankSum=1.922;VQSLOD=5.3835;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,39:44:99:1477,108,0	1/1:0,6:6:18.06:246,18,0	0/0:21,0:17:51.13:0,51,562	0/0:11,0:7:18.05:0,18,204	0/0:21,0:21:63.18:0,63,714	1/1:0,29:29:75.25:1018,75,0	1/1:5,24:29:66.22:902,66,0	1/1:3,24:27:72.17:927,72,0	1/1:2,20:22:60.20:821,60,0	0/0:13,0:13:36.09:0,36,398	0/0:22,0:22:66.19:0,66,748	1/1:1,22:23:60.20:821,60,0	1/1:1,21:22:54.18:739,54,0	1/1:1,16:17:39.13:533,39,0	0/0:24,0:24:69.20:0,69,781	0/0:19,1:20:16.12:0,16,571	0/0:38,0:38:99:0,114,1293	1/1:4,20:24:57.19:780,57,0	1/1:2,24:26:72.24:982,72,0	1/1:0,24:24:69.23:943,69,0	1/1:4,47:51:99:1847,135,0	0/0:22,0:22:63.18:0,63,712	1/1:1,18:19:45.02:612,45,0	1/1:2,32:34:87.29:1190,87,0	1/1:0,20:20:54.18:739,54,0	0/0:19,0:19:54.15:0,54,612	1/1:0,21:21:57.19:779,57,0	0/0:7,0:7:18.05:0,18,204
chr10	103398069	.	T	TA	7054.39	PASS	AB=0.659;AC=30;AF=0.536;AN=56;BaseQRankSum=-8.509;DP=526;FS=2.062;HRun=10;HaplotypeScore=61.5682;InbreedingCoeff=0.6215;MQ=70.84;MQ0=0;MQRankSum=-1.711;QD=21.51;ReadPosRankSum=-0.509;VQSLOD=5.6066;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:8,15:22:1.15:399,0,1	0/1:3,8:11:22.22:197,0,22	0/0:10,0:11:20:0,20,154	0/1:15,0:13:13.02:13,0,134	0/0:28,0:28:50.89:0,51,419	0/1:10,18:28:1.82:584,0,2	0/1:5,11:16:34.83:281,0,35	0/1:6,18:23:13.83:469,0,14	1/1:3,14:17:36.09:384,36,0	0/0:15,0:16:37.65:0,38,276	0/0:22,0:22:50.89:0,51,416	1/1:4,14:17:50.88:482,51,0	1/1:6,9:16:42.39:421,42,0	1/1:6,7:14:26.19:287,26,0	0/0:26,0:26:68.81:0,69,559	0/0:12,0:12:32.94:0,33,271	0/0:33,0:34:97.91:0,98,791	1/1:4,9:14:29.91:302,30,0	1/1:2,10:12:30.07:314,30,0	1/1:7,18:26:57.07:592,57,0	1/1:2,11:13:8.44:295,8,0	0/0:15,0:18:43:0,43,329	1/1:3,16:19:48.08:500,48,0	1/1:2,7:9:15.04:160,15,0	1/1:5,20:25:35.51:583,36,0	0/0:21,0:22:55.91:0,56,442	1/1:4,22:28:75.18:792,75,0	0/0:9,0:9:23.97:0,24,197
chr10	103398983	.	GGAGTTAA	G	11982.03	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=11.830;DP=451;FS=29.644;HRun=0;HaplotypeScore=117.2856;InbreedingCoeff=0.9707;MQ=78.65;MQ0=0;MQRankSum=-11.104;QD=53.02;ReadPosRankSum=2.207;VQSLOD=3.0092;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,13:18:36.12:919,36,0	1/1:0,11:11:33.11:845,33,0	0/0:16,0:16:36.32:0,36,1182	0/0:21,0:21:54.50:0,54,1378	0/0:25,0:25:72.25:0,72,2641	1/1:1,12:13:30.10:769,30,0	1/1:0,8:8:14.92:384,15,0	1/1:4,23:27:69.20:1512,69,0	1/1:2,10:12:27.09:692,27,0	0/0:22,0:22:63.22:0,63,2481	0/0:25,0:25:72.23:0,72,2670	1/1:1,11:12:30.10:768,30,0	1/1:0,5:5:9.03:231,9,0	1/1:0,5:5:12.04:307,12,0	0/0:18,0:18:51.18:0,51,1831	0/0:22,0:22:66.23:0,66,2436	0/0:11,0:11:33.11:0,33,1075	1/1:2,6:8:15.05:384,15,0	1/1:0,11:11:30.08:648,30,0	1/1:1,32:30:75.26:1817,75,0	1/1:1,9:10:15.05:384,15,0	0/0:9,0:9:27.09:0,27,1070	1/1:1,8:8:21.07:538,21,0	1/1:0,7:7:8.95:171,9,0	1/1:1,19:18:35.75:921,36,0	0/0:27,0:27:75.25:0,75,2619	1/1:3,14:17:27.09:692,27,0	0/0:29,0:29:81.19:0,81,2933
chr10	103399119	.	GTGTGTTCTC	G	9486.42	PASS	AB=0.841;AC=36;AF=0.643;AN=56;BaseQRankSum=9.968;DP=1191;FS=10.391;HRun=0;HaplotypeScore=427.2598;InbreedingCoeff=-0.1561;MQ=52.25;MQ0=16;MQRankSum=-9.980;QD=9.35;ReadPosRankSum=2.258;VQSLOD=1.8055;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:30:59.11:611,59,0	0/1:2,14:16:22.11:179,0,22	0/0:72,0:50:71.19:0,71,1493	0/0:66,0:43:45.09:0,45,1614	0/1:39,0:39:99:158,0,1724	0/1:10,22:31:29.24:125,0,29	1/1:29,0:26:28.05:251,28,0	1/1:99,0:87:99:1088,159,0	0/1:35,1:32:26.38:287,0,26	0/1:72,0:72:99:386,0,3898	0/0:37,0:37:0.20:0,0,1662	1/1:13,17:29:6.79:193,7,0	0/1:7,31:37:29.48:130,0,29	1/1:40,1:35:24.28:789,24,0	0/1:51,0:51:99:142,0,1846	0/1:49,0:49:99:554,0,2733	0/1:49,0:49:99:244,0,2764	1/1:24,0:18:9.77:300,10,0	1/1:11,19:27:50.54:688,51,0	1/1:7,39:45:50.69:785,51,0	1/1:47,0:44:34.19:196,34,0	0/1:35,0:35:99:166,0,1675	1/1:4,30:34:27.01:602,27,0	1/1:25,1:25:11.50:110,12,0	0/1:8,27:35:66.20:531,0,66	0/1:62,0:62:99:490,0,3876	0/1:8,31:38:18.98:370,0,19	0/1:22,0:22:99:111,0,1655
chr10	103399121	.	G	GTATTCTGTA	7619.87	PASS	AB=0.957;AC=22;AF=0.393;AN=56;BaseQRankSum=14.283;DP=1224;FS=3.902;HRun=0;HaplotypeScore=454.8477;InbreedingCoeff=-0.6702;MQ=51.13;MQ0=16;MQRankSum=-10.823;QD=8.11;ReadPosRankSum=0.290;VQSLOD=1.7248;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,1:30:99:263,0,575	0/1:18,0:18:14.54:15,0,125	0/0:73,0:49:99:0,133,2617	0/0:66,0:43:99:0,103,1886	0/1:40,0:40:99:191,0,1399	0/1:35,0:33:99:140,0,271	0/1:31,0:28:99:134,0,686	0/1:97,0:86:99:934,0,1379	0/1:22,12:36:70.62:71,0,411	0/1:76,0:76:99:789,0,3034	0/1:36,0:36:99:177,0,1523	0/1:30,0:29:99:204,0,267	0/1:39,0:37:13.10:13,0,196	0/1:41,0:35:99:497,0,713	0/1:36,18:60:99:232,0,1885	0/1:50,3:53:99:853,0,2475	0/1:47,2:49:99:319,0,2618	0/1:23,0:17:99:125,0,466	0/1:30,0:27:99:586,0,579	0/1:46,0:45:73.55:74,0,777	0/0:46,0:43:18.41:0,18,816	0/1:36,0:36:99:376,0,1270	0/0:34,0:34:0.06:0,0,148	0/0:26,0:25:38.67:0,39,550	0/1:35,0:35:69.76:70,0,175	0/1:49,16:68:99:1244,0,3247	0/0:39,0:38:13.71:0,14,281	0/1:22,0:22:99:317,0,1147
chr10	103399148	.	GTGTTCTCTA	G	6720.10	PASS	AB=0.970;AC=24;AF=0.429;AN=56;BaseQRankSum=-3.294;DP=1424;FS=6.968;HRun=0;HaplotypeScore=598.2311;InbreedingCoeff=-0.7468;MQ=49.31;MQ0=46;MQRankSum=-6.405;QD=5.86;ReadPosRankSum=-5.851;VQSLOD=-0.1595;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:30:99:191,0,109	0/1:20,0:20:99:107,0,148	0/1:65,1:27:9.99:10,0,923	0/0:72,2:38:69.86:0,70,1380	0/1:52,13:65:62.01:62,0,1998	0/1:34,0:31:74.51:75,0,211	0/1:24,0:20:78.83:79,0,249	0/0:111,0:92:76.81:0,77,2147	0/1:36,0:29:99:177,0,202	0/1:76,34:110:99:814,0,4514	0/1:31,21:52:99:135,0,1635	0/1:37,0:33:99:183,0,422	0/1:49,0:47:99:234,0,243	0/1:41,0:34:99:458,0,298	0/1:73,0:73:99:618,0,1387	0/1:66,0:66:99:417,0,2596	0/0:40,0:40:37.59:0,38,2002	0/1:23,0:16:56.63:153,0,57	0/1:37,0:32:99:185,0,485	0/1:63,0:59:99:639,0,376	0/1:45,0:40:99:172,0,357	0/0:33,18:51:14.74:0,15,1927	0/1:43,0:42:99:442,0,281	0/1:25,0:24:49.85:50,0,103	0/1:44,0:44:99:565,0,232	0/1:84,0:83:99:523,0,4002	0/1:42,0:41:99:331,0,217	0/1:31,0:31:99:101,0,1551
chr10	103400656	.	A	AT	12346.43	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-10.800;DP=618;FS=3.165;HRun=5;HaplotypeScore=65.7781;InbreedingCoeff=0.9975;MQ=83.81;MQ0=0;MQRankSum=-1.920;QD=33.10;ReadPosRankSum=-0.035;VQSLOD=5.3276;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:72.23:947,72,0	1/1:0,7:7:18.06:237,18,0	0/0:19,0:19:43.57:0,44,460	0/0:18,0:18:42:0,42,417	0/0:25,0:25:72.18:0,72,774	1/1:1,23:24:63.20:829,63,0	1/1:2,17:19:39.13:513,39,0	1/1:4,31:36:90.19:1115,90,0	1/1:4,18:22:54.18:710,54,0	0/0:31,0:31:84.20:0,84,897	0/0:12,0:12:36.09:0,36,386	1/1:0,21:21:60.20:789,60,0	1/1:0,21:21:54.17:710,54,0	1/1:2,19:21:51.17:671,51,0	0/0:28,0:28:75.19:0,75,806	0/0:20,0:20:54.10:0,54,562	0/0:35,0:35:99:0,102,1077	1/1:1,14:15:33.11:434,33,0	1/1:3,17:20:54.15:679,54,0	1/1:1,31:32:93.26:1203,93,0	1/1:2,24:26:72.23:943,72,0	0/0:25,0:25:69.17:0,69,742	1/1:2,23:25:54.18:711,54,0	1/1:0,19:19:51.17:671,51,0	1/1:0,12:12:30.10:395,30,0	0/0:25,0:25:66.14:0,66,696	1/1:1,22:23:60.20:788,60,0	0/0:7,0:7:18.04:0,18,193
chr10	103400999	.	CA	C	15228.88	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=12.058;DP=712;FS=0.580;HRun=2;HaplotypeScore=69.6382;InbreedingCoeff=0.9998;MQ=81.44;MQ0=0;MQRankSum=-3.436;QD=35.42;ReadPosRankSum=2.379;VQSLOD=5.4170;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,56:57:99:2025,157,0	1/1:0,9:9:27.05:331,27,0	0/0:17,0:17:45.15:0,45,641	0/0:20,0:20:51.17:0,51,745	0/0:26,0:26:75.24:0,75,1099	1/1:1,13:14:39.13:500,39,0	1/1:0,19:19:48.16:623,48,0	1/1:0,18:18:54.18:700,54,0	1/1:0,30:30:87.28:1130,87,0	0/0:36,0:36:99:0,105,1554	0/0:14,0:14:42.14:0,42,630	1/1:0,30:30:78.25:1013,78,0	1/1:0,21:21:63.20:817,63,0	1/1:0,16:16:39.13:506,39,0	0/0:31,0:31:90.29:0,90,1320	0/0:32,1:33:60.37:0,60,1399	0/0:39,0:39:99:0,114,1663	1/1:0,20:20:60.20:779,60,0	1/1:1,24:25:75.17:923,75,0	1/1:1,31:32:87.28:1129,87,0	1/1:1,51:52:99:1752,135,0	0/0:22,0:22:66.21:0,66,965	1/1:0,22:22:63.20:818,63,0	1/1:1,23:24:63.20:818,63,0	1/1:0,18:18:48.16:623,48,0	0/0:32,0:32:93.31:0,93,1388	1/1:1,22:23:57.19:740,57,0	0/0:12,0:12:36.12:0,36,531
chr10	103402747	.	A	AAG	12463.75	PASS	AB=0.560;AC=32;AF=0.615;AN=52;BaseQRankSum=12.273;DP=588;FS=45.756;HRun=0;HaplotypeScore=85.9261;InbreedingCoeff=0.7939;MQ=43.18;MQ0=31;MQRankSum=-9.176;QD=36.13;ReadPosRankSum=-1.658;VQSLOD=2.4476;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:26:45.15:912,45,0	1/1:0,16:16:48.16:971,48,0	./.	./.	0/0:21,0:20:51.17:0,51,832	1/1:2,11:14:30.10:561,30,0	1/1:8,5:8:12.04:238,12,0	1/1:5,17:10:27.06:507,27,0	1/1:2,13:13:0.49:634,0,0	0/0:31,0:29:78.22:0,78,1240	0/0:15,0:15:42.14:0,42,685	1/1:2,19:21:45.15:889,45,0	1/1:6,21:23:3.57:903,4,0	1/1:1,8:8:9.03:182,9,0	0/0:35,0:30:81.28:0,81,1307	0/0:29,0:27:75.26:0,75,1220	0/0:36,0:34:90.31:0,90,1463	1/1:3,16:11:33.11:670,33,0	1/1:3,18:19:54.19:1097,54,0	1/1:1,12:12:30.10:608,30,0	0/1:8,24:27:40.47:979,0,40	0/0:21,0:20:57.19:0,57,926	1/1:4,13:15:30.10:607,30,0	0/1:5,23:21:0.78:845,0,1	1/1:2,15:16:45.15:889,45,0	0/0:34,0:33:96.33:0,96,1554	1/1:3,23:23:48.16:970,48,0	0/0:5,0:5:12.04:0,12,196
chr10	103403584	.	T	TGTGC	567.36	PASS	AB=0.994;AC=15;AF=0.268;AN=56;BaseQRankSum=3.096;DP=432;FS=0.000;HRun=0;HaplotypeScore=112.5291;InbreedingCoeff=0.1089;MQ=37.53;MQ0=3;MQRankSum=-0.416;QD=3.38;ReadPosRankSum=1.343;VQSLOD=2.0723;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:2.96:0,3,19	0/0:8,0:8:2.98:0,3,21	0/0:5,0:4:5.95:0,6,49	0/0:6,0:4:6:0,6,65	0/0:9,0:9:0:0,0,0	0/1:12,0:12:3.45:3,0,34	0/0:29,0:29:11.70:0,12,90	1/1:16,0:14:2.65:95,3,0	0/0:16,0:15:2.05:0,2,23	0/0:23,0:23:47.58:0,48,306	0/1:14,0:14:18.95:25,0,19	0/0:30,0:29:2.67:0,3,25	0/0:21,0:21:3:0,3,25	0/1:21,0:22:27.96:28,0,63	0/0:15,0:14:0:0,0,0	0/1:19,0:19:19.39:25,0,19	0/1:14,0:14:41.77:102,0,42	0/1:8,0:8:29.93:34,0,30	1/1:13,0:13:4.46:169,4,0	0/0:4,13:17:0:0,0,0	0/1:17,0:16:0.08:114,0,0	1/1:16,0:16:2.57:31,3,0	0/0:8,0:8:3:0,3,25	0/0:17,0:17:9.46:0,9,75	0/0:12,0:12:0:0,0,0	0/0:18,0:18:0.95:0,1,154	1/1:17,0:17:13.89:76,14,0	0/0:8,0:7:6.29:0,6,33
chr10	103403586	.	T	TGC	153.43	PASS	AB=0.948;AC=8;AF=0.148;AN=54;BaseQRankSum=0.401;DP=404;FS=1.122;HRun=0;HaplotypeScore=94.5828;InbreedingCoeff=0.0918;MQ=34.72;MQ0=3;MQRankSum=0.082;QD=1.65;ReadPosRankSum=0.713;VQSLOD=1.8504;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:2.96:0,3,19	0/0:7,0:7:2.98:0,3,21	0/0:2,0:2:5.95:0,6,49	0/0:4,0:3:6:0,6,65	0/0:7,0:7:0:0,0,0	0/1:12,0:12:3.32:3,0,34	0/0:28,0:28:11.42:0,11,89	0/1:15,0:13:17.40:67,0,17	0/0:15,0:14:2.99:0,3,25	0/0:21,0:21:47.76:0,48,301	0/0:14,0:14:3.47:0,3,26	0/0:29,0:28:2.99:0,3,25	0/0:21,0:21:3:0,3,25	0/0:21,0:21:8.92:0,9,74	0/0:13,0:12:0:0,0,0	0/1:18,0:18:1.11:1,0,20	0/0:14,0:14:0.30:0,0,59	0/1:7,0:7:13.12:13,0,37	0/1:6,3:9:23.58:48,0,24	0/0:16,0:16:0:0,0,0	0/1:14,1:14:2.42:61,0,2	0/0:16,0:16:0.47:0,0,2	0/0:8,0:8:3:0,3,25	0/0:17,0:17:9.89:0,10,75	./.	0/0:17,0:17:32.04:0,32,206	1/1:17,0:17:13.78:76,14,0	0/0:8,0:7:6.32:0,6,35
chr10	103405343	.	GGTGT	G	2052.09	PASS	AB=0.688;AC=21;AF=0.404;AN=52;BaseQRankSum=0.191;DP=337;FS=4.110;HRun=0;HaplotypeScore=82.6936;InbreedingCoeff=0.5958;MQ=47.44;MQ0=12;MQRankSum=0.288;QD=13.59;ReadPosRankSum=0.578;VQSLOD=3.1295;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,6:20:18.06:280,18,0	./.	./.	0/0:16,0:11:2.60:0,3,10	0/0:7,0:9:6.02:0,6,105	1/1:6,7:11:6.02:94,6,0	1/1:9,5:14:22.62:318,23,0	0/0:21,0:18:6:0,6,70	1/1:5,4:10:15.04:216,15,0	0/0:18,0:21:41.61:0,42,610	0/0:10,0:12:19.88:0,20,375	1/1:0,2:4:6.01:75,6,0	1/1:3,8:11:24.07:358,24,0	1/1:3,7:12:18:217,18,0	0/0:7,0:17:12.04:0,12,223	0/0:11,0:12:18.06:0,18,365	0/1:18,1:23:44.24:44,0,753	0/1:5,1:12:50.54:72,0,51	0/0:7,0:6:6.01:0,6,67	0/0:8,0:7:8.99:0,9,99	0/0:8,0:9:7.57:0,8,96	0/0:13,0:12:24.55:0,25,488	1/1:6,3:9:14.05:224,14,0	1/1:3,7:10:12.04:188,12,0	0/1:4,5:10:18.14:154,0,18	0/0:16,0:17:20.80:0,21,303	0/0:6,0:7:10.85:0,11,142	0/0:1,0:2:5.49:0,5,24
chr10	103405457	.	TCCTTCTG	T	12333.26	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=11.639;DP=421;FS=72.557;HRun=0;HaplotypeScore=116.8201;InbreedingCoeff=0.9621;MQ=84.90;MQ0=1;MQRankSum=-13.855;QD=58.45;ReadPosRankSum=2.172;VQSLOD=2.0589;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:25:36.12:980,36,0	1/1:0,2:2:6.02:167,6,0	0/0:22,0:20:55.32:0,55,1661	0/0:39,0:34:73.52:0,74,2147	0/0:14,0:14:42.14:0,42,1687	1/1:0,15:15:24.08:646,24,0	1/1:5,18:23:66.21:1704,66,0	1/1:0,20:18:48.15:1189,48,0	1/1:0,14:14:36.12:1005,36,0	0/0:13,0:13:39.13:0,39,1580	0/0:12,0:12:36.12:0,36,1335	1/1:0,11:11:30.10:818,30,0	1/1:0,19:19:48.16:1334,48,0	1/1:0,9:9:18.06:503,18,0	0/0:22,0:22:63.22:0,63,2527	0/0:15,0:15:45.15:0,45,1872	0/0:37,0:37:99:0,111,4382	1/1:0,14:14:33.11:922,33,0	1/1:0,8:8:24.07:611,24,0	1/1:0,9:9:18.06:503,18,0	1/1:0,11:11:12.04:288,12,0	0/0:11,0:11:30.10:0,30,1137	1/1:0,5:5:15.05:419,15,0	1/1:0,9:9:8.98:251,9,0	1/1:0,6:6:12.04:335,12,0	0/0:16,0:16:48.15:0,48,1911	1/1:0,10:10:24.08:660,24,0	0/0:8,0:8:24.08:0,24,1007
chr10	103406466	.	A	AT	5384.47	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=10.430;DP=413;FS=2.424;HRun=5;HaplotypeScore=77.2326;InbreedingCoeff=0.9416;MQ=71.69;MQ0=7;MQRankSum=-10.068;QD=24.70;ReadPosRankSum=-1.210;VQSLOD=3.5661;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,6:14:21.91:249,22,0	1/1:1,5:6:16.86:187,17,0	0/0:32,0:24:53.29:0,53,490	0/0:17,0:9:18.26:0,18,170	0/0:17,0:17:42.10:0,42,450	1/1:6,12:18:34.81:430,35,0	1/1:4,3:7:18.03:199,18,0	1/1:2,22:24:63.18:773,63,0	1/1:4,4:8:14.61:133,15,0	0/0:17,0:17:51.13:0,51,547	0/0:15,0:15:39.10:0,39,419	1/1:7,3:10:10.84:109,11,0	1/1:5,4:9:10.04:119,10,0	1/1:5,8:13:25.72:308,26,0	0/0:13,0:13:36.09:0,36,386	0/0:9,0:9:24.06:0,24,258	0/0:33,0:33:93.23:0,93,997	1/1:6,11:17:31.10:388,31,0	1/1:7,15:20:51.59:625,52,0	1/1:3,10:13:33.10:414,33,0	1/1:3,2:5:6.02:68,6,0	0/0:6,0:6:9.02:0,9,96	1/1:1,2:6:6.02:74,6,0	1/1:4,4:8:21.04:250,21,0	1/1:2,14:16:43.37:483,43,0	0/0:24,0:24:63.15:0,63,671	1/1:4,18:22:48.14:576,48,0	0/0:12,0:12:27.07:0,27,290
chr10	103406470	.	TTA	T	1351.52	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=10.183;DP=402;FS=19.100;HRun=0;HaplotypeScore=95.7350;InbreedingCoeff=0.8035;MQ=67.48;MQ0=7;MQRankSum=-5.793;QD=6.47;ReadPosRankSum=-2.693;VQSLOD=1.1847;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,2:16:25.92:211,26,0	1/1:5,1:6:10.60:84,11,0	0/0:29,0:20:44.50:0,45,701	0/0:18,0:10:13.59:0,14,203	0/0:16,0:16:47.70:0,48,691	1/1:16,2:18:16.36:189,16,0	1/1:7,0:7:6.83:45,7,0	1/1:28,0:28:0.04:188,0,0	1/1:4,4:8:8.40:90,8,0	0/0:17,0:17:51.17:0,51,830	0/0:15,0:15:42.11:0,42,660	1/1:4,5:9:6.60:59,7,0	1/1:4,2:6:7.46:95,7,0	1/1:8,3:12:9.18:83,9,0	0/0:13,0:13:39.12:0,39,634	0/0:9,0:9:27.09:0,27,444	0/0:33,0:33:99:0,99,1538	1/1:11,5:16:14.94:115,15,0	1/1:22,0:20:3.21:76,3,0	1/1:14,0:14:9.41:77,9,0	0/0:4,0:4:4.94:0,5,15	0/0:5,0:5:15.01:0,15,176	1/1:5,0:5:2.36:14,2,0	1/1:7,0:7:13.71:100,14,0	1/1:16,0:16:7.15:68,7,0	0/0:24,0:24:69.20:0,69,1089	1/1:19,0:19:11.54:67,12,0	0/0:10,0:10:27.09:0,27,456
chr10	103406472	.	A	ATTTT	7048.12	PASS	AB=0.975;AC=36;AF=0.643;AN=56;BaseQRankSum=13.309;DP=406;FS=1.343;HRun=7;HaplotypeScore=93.6026;InbreedingCoeff=0.8117;MQ=68.34;MQ0=7;MQRankSum=-9.346;QD=27.11;ReadPosRankSum=-2.645;VQSLOD=1.5345;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,4:16:29.66:523,30,0	1/1:4,2:6:18.03:296,18,0	0/1:30,0:21:8.40:8,0,354	0/1:18,0:11:9.14:9,0,96	0/0:15,0:16:41.99:0,42,575	1/1:8,8:17:46.04:942,46,0	1/1:3,2:7:12.04:223,12,0	1/1:19,0:28:29.27:470,29,0	1/1:6,2:8:15.05:280,15,0	0/0:18,0:18:48.13:0,48,694	0/0:15,0:15:39.11:0,39,584	1/1:6,2:8:12.04:236,12,0	1/1:3,3:6:14.74:313,15,0	1/1:5,7:12:27.09:606,27,0	0/0:13,0:13:39.10:0,39,565	0/0:12,0:12:24.01:0,24,344	0/0:33,0:33:84.20:0,84,1242	1/1:10,7:17:39.04:758,39,0	1/1:10,0:20:49.24:350,49,0	1/1:5,0:14:38.70:294,39,0	1/1:2,0:4:8.92:73,9,0	0/0:5,0:5:9.01:0,9,116	1/1:4,1:5:6.01:97,6,0	1/1:5,2:7:12.02:195,12,0	1/1:3,13:16:45.13:972,45,0	0/0:24,0:24:66.19:0,66,979	1/1:6,0:18:50.57:402,51,0	0/0:10,0:10:27.09:0,27,412
chr10	103407129	.	TTGA	T	9362.91	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=15.611;DP=689;FS=9.944;HRun=0;HaplotypeScore=133.3111;InbreedingCoeff=0.9621;MQ=69.98;MQ0=0;MQRankSum=-12.561;QD=24.57;ReadPosRankSum=1.741;VQSLOD=4.2344;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,23:32:69.23:988,69,0	1/1:1,6:7:15.05:216,15,0	0/0:27,0:24:23.61:0,24,313	0/0:29,0:28:40.47:0,40,651	0/0:31,0:30:50.42:0,50,1308	1/1:11,8:19:33.05:433,33,0	1/1:3,18:20:39.09:537,39,0	1/1:12,16:28:48.16:684,48,0	1/1:10,16:26:45.15:647,45,0	0/0:37,0:37:87.30:0,87,1775	0/0:21,1:22:1.97:0,2,813	1/1:13,18:31:57.19:820,57,0	1/1:7,21:28:45.15:647,45,0	1/1:13,16:28:51.17:734,51,0	0/0:49,1:49:74.21:0,74,2281	0/0:28,0:28:62.10:0,62,1225	0/0:24,0:24:66.23:0,66,1343	1/1:4,7:11:21.07:302,21,0	1/1:11,7:17:21.07:299,21,0	1/1:7,12:19:36.12:518,36,0	1/1:17,10:26:39.13:561,39,0	0/0:27,0:27:63.22:0,63,1247	1/1:11,12:22:36.12:509,36,0	1/1:9,18:27:48.16:666,48,0	1/1:7,7:14:24.07:327,24,0	0/0:27,0:27:75.26:0,75,1524	1/1:6,14:20:33.11:475,33,0	0/0:6,0:6:12.04:0,12,245
chr10	103407172	.	AGAGGAGGAG	A	5884.92	PASS	AB=0.984;AC=22;AF=0.393;AN=56;BaseQRankSum=12.333;DP=1300;FS=56.867;HRun=0;HaplotypeScore=287.3597;InbreedingCoeff=0.0797;MQ=35.74;MQ0=199;MQRankSum=-10.501;QD=7.69;ReadPosRankSum=-0.475;VQSLOD=2.0140;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:76,2:43:25:454,25,0	1/1:14,0:6:14.93:194,15,0	0/0:29,0:17:2.16:0,2,293	0/0:21,0:15:34.89:0,35,416	0/0:43,0:33:49.83:0,50,924	0/1:33,0:20:6.26:270,0,6	0/1:52,1:21:99:240,0,186	0/1:56,0:15:60.93:145,0,61	0/1:40,1:27:39.51:487,0,40	0/0:65,0:46:99:0,111,2428	0/0:34,0:23:62.97:0,63,939	0/1:38,1:32:38.47:755,0,38	1/1:45,2:31:54.76:818,55,0	0/1:42,0:27:42.74:464,0,43	0/0:73,0:52:99:0,117,2112	0/0:62,0:47:99:0,106,2187	0/0:75,0:51:56.28:0,56,1324	0/1:43,0:26:99:249,0,103	0/1:38,2:12:15.77:264,0,16	1/1:19,13:28:8.97:230,9,0	0/1:85,1:37:93.65:174,0,94	0/0:50,0:36:46.79:0,47,1188	0/1:28,1:21:44.70:285,0,45	0/1:70,0:42:99:284,0,107	0/1:26,0:20:99:140,0,276	0/0:68,0:41:99:0,99,1901	1/1:29,2:20:13.32:432,13,0	0/0:11,0:9:16.82:0,17,217
chr10	103407196	.	GGAGGAA	G	1492.99	PASS	AB=0.988;AC=20;AF=0.370;AN=54;BaseQRankSum=9.607;DP=1716;FS=39.835;HRun=0;HaplotypeScore=237.6030;InbreedingCoeff=-0.1560;MQ=25.06;MQ0=465;MQRankSum=-9.323;QD=1.36;ReadPosRankSum=1.844;VQSLOD=1.2148;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:99,2:41:98.15:196,0,98	1/1:16,0:3:5.69:47,6,0	./.	0/0:4,0:3:3:0,3,26	0/0:50,0:31:39.55:0,40,787	0/1:46,0:23:79.52:80,0,97	0/1:82,0:20:46.03:46,0,348	0/1:126,0:14:22.41:22,0,92	0/1:56,1:20:99:153,0,113	0/0:87,0:44:86.03:0,86,2267	0/0:32,0:20:30.10:0,30,699	0/1:50,0:23:99:109,0,183	1/1:52,0:26:3.16:259,3,0	0/1:56,2:24:99:119,0,152	0/0:105,0:59:71.04:0,71,1770	0/0:83,0:51:87.39:0,87,1933	0/0:104,0:58:35.11:0,35,1543	0/1:75,0:35:50.97:51,0,234	0/1:55,0:13:73.24:120,0,73	1/1:27,0:20:13.70:152,14,0	0/1:126,1:42:0.37:0,0,249	0/1:57,0:34:1.80:2,0,954	0/1:31,1:20:64.06:80,0,64	0/1:98,0:41:75.70:76,0,208	0/0:38,0:24:6.20:0,6,213	0/0:94,0:42:87.67:0,88,1863	0/1:30,1:17:48.97:142,0,49	0/0:17,0:12:12.51:0,13,201
chr10	103407199	.	GGAA	G	1175.52	PASS	AB=0.959;AC=15;AF=0.278;AN=54;BaseQRankSum=8.996;DP=1753;FS=31.475;HRun=0;HaplotypeScore=214.7273;InbreedingCoeff=-0.2372;MQ=24.15;MQ0=500;MQRankSum=-8.512;QD=1.51;ReadPosRankSum=-1.959;VQSLOD=1.2641;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:101,2:40:99:122,0,152	0/1:17,0:3:6.31:6,0,18	./.	0/0:2,0:1:3:0,3,26	0/0:50,1:30:43.05:0,43,717	0/1:47,2:25:82.94:83,0,176	0/1:79,3:19:29.52:30,0,318	0/0:138,0:13:7.75:0,8,208	0/0:56,0:19:8.01:0,8,243	0/0:85,2:43:58.49:0,58,1873	0/0:31,0:17:29.90:0,30,596	0/1:53,0:22:23.95:24,0,366	0/1:52,2:26:49.51:50,0,185	0/1:54,3:23:99:160,0,146	0/0:106,0:57:84.95:0,85,1688	0/0:82,0:49:86.37:0,86,1599	0/0:103,4:57:21.69:0,22,1367	0/1:77,0:36:16.43:16,0,252	0/1:53,0:15:28.12:28,0,114	1/1:28,0:20:14.69:120,15,0	0/0:133,0:42:2.48:0,2,146	0/0:59,0:36:20.56:0,21,1025	0/1:28,6:21:61.69:251,0,62	0/1:102,0:41:15.85:16,0,205	0/1:29,10:25:99:354,0,117	0/0:102,1:43:86.31:0,86,1657	0/1:29,0:15:70.02:70,0,89	0/0:15,0:10:12.51:0,13,251
chr10	103407202	.	AGAG	A	348.47	PASS	AB=0.996;AC=8;AF=0.154;AN=52;BaseQRankSum=8.286;DP=1802;FS=6.325;HRun=0;HaplotypeScore=222.8699;InbreedingCoeff=0.0177;MQ=23.48;MQ0=543;MQRankSum=-6.621;QD=0.95;ReadPosRankSum=-1.508;VQSLOD=1.6072;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:98,1:37:49.45:49,0,155	0/0:17,0:3:7.79:0,8,54	./.	./.	0/0:52,0:29:32.26:0,32,631	0/0:50,2:25:7.77:0,8,274	0/0:86,0:18:18.92:0,19,234	0/0:155,0:12:21.02:0,21,139	0/0:57,1:20:21.22:0,21,295	0/0:86,1:43:70.12:0,70,1522	0/0:31,0:16:23.95:0,24,514	0/0:55,0:22:16.92:0,17,477	0/0:54,0:24:26.81:0,27,324	0/1:55,0:21:60.24:60,0,217	0/0:108,1:57:87.19:0,87,1454	0/0:81,0:48:74.87:0,75,1399	0/0:109,0:56:8.50:0,8,1221	0/1:80,1:37:55.25:55,0,332	0/0:50,0:14:11.60:0,12,158	1/1:27,0:19:4.39:38,4,0	0/0:140,1:44:14.78:0,15,205	0/0:63,0:39:48.10:0,48,914	0/1:34,0:21:99:100,0,146	0/0:104,2:40:10.29:0,10,226	0/1:39,0:25:99:163,0,192	0/0:105,0:43:89.92:0,90,1535	0/1:30,0:16:13.22:13,0,164	0/0:18,0:11:16.85:0,17,260
chr10	103407205	.	G	GGAA	1828.89	PASS	AB=0.992;AC=18;AF=0.346;AN=52;BaseQRankSum=9.618;DP=1857;FS=40.487;HRun=0;HaplotypeScore=216.3337;InbreedingCoeff=-0.2936;MQ=23.17;MQ0=577;MQRankSum=-7.845;QD=1.67;ReadPosRankSum=1.823;VQSLOD=1.5209;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:101,0:37:99:130,0,191	0/1:16,0:3:10.97:82,0,11	./.	./.	0/0:52,0:30:23.41:0,23,503	0/1:50,0:24:41.43:41,0,225	0/1:87,0:16:31.30:31,0,266	0/1:168,0:12:8.22:8,0,113	0/1:60,1:21:62.04:196,0,62	0/0:88,0:40:93.04:0,93,1457	0/0:31,0:17:29.89:0,30,452	0/1:58,0:21:99:253,0,181	1/1:54,0:24:26.35:393,26,0	0/1:54,0:21:99:116,0,185	0/0:108,2:56:76.30:0,76,1262	0/0:85,0:49:96.16:0,96,1332	0/0:115,0:59:61.38:0,61,1145	0/1:86,2:41:99:129,0,293	0/1:51,0:14:99:112,0,113	0/1:28,0:19:1.13:66,0,1	0/0:146,0:46:28.87:0,29,380	0/1:59,1:37:37.54:38,0,795	0/1:34,0:20:56.03:56,0,138	0/1:108,2:41:99:119,0,145	0/1:40,0:25:42:42,0,358	0/0:111,0:45:99:0,102,1460	0/1:29,0:15:99:176,0,143	0/0:20,0:13:21:0,21,261
chr10	103407265	.	GGAA	G	824.49	PASS	AB=0.981;AC=19;AF=0.365;AN=52;BaseQRankSum=9.673;DP=1784;FS=49.177;HRun=0;HaplotypeScore=209.3344;InbreedingCoeff=-0.4382;MQ=22.47;MQ0=431;MQRankSum=-8.371;QD=0.71;ReadPosRankSum=0.395;VQSLOD=0.9108;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:113,0:42:11.69:12,0,502	0/1:17,2:8:99:106,0,110	./.	./.	0/0:43,0:22:26.76:0,27,462	0/1:55,0:29:72.66:73,0,248	0/1:76,5:23:99:225,0,217	1/1:74,0:2:2.60:10,3,0	0/1:72,2:29:23.79:24,0,389	0/0:83,0:36:80.34:0,80,1459	0/0:36,0:14:24.07:0,24,474	0/1:67,0:27:54.58:55,0,166	0/1:53,0:31:21.52:22,0,389	0/1:56,0:23:7.25:7,0,305	0/0:91,1:53:57.02:0,57,1435	0/0:83,0:44:55.39:0,55,907	0/0:131,1:71:50.83:0,51,1616	0/1:82,1:41:23.36:23,0,532	0/1:26,1:9:35.93:36,0,188	0/1:28,1:18:73.41:73,0,247	0/1:160,4:49:37.92:38,0,605	0/0:47,0:25:42.10:0,42,868	0/1:31,1:22:99:158,0,141	0/1:110,1:53:59.95:60,0,360	0/1:41,0:22:22.37:22,0,145	0/0:111,2:48:64.19:0,64,1893	0/1:40,0:18:22.32:22,0,227	0/1:36,0:18:12.10:12,0,249
chr10	103407274	.	GGAA	G	2440.19	PASS	AB=0.926;AC=18;AF=0.346;AN=52;BaseQRankSum=9.042;DP=1850;FS=52.709;HRun=0;HaplotypeScore=211.5325;InbreedingCoeff=-0.4081;MQ=22.53;MQ0=435;MQRankSum=-6.426;QD=2.12;ReadPosRankSum=1.725;VQSLOD=1.2894;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:111,4:43:99:127,0,355	0/1:21,2:10:75.88:125,0,76	./.	./.	0/0:46,0:26:38.67:0,39,672	0/1:47,9:29:99:357,0,231	0/1:78,6:25:99:289,0,189	1/1:67,1:2:4.57:55,5,0	0/1:67,6:28:99:122,0,287	0/0:93,0:43:48.91:0,49,1359	0/0:38,0:14:21.07:0,21,452	0/1:64,7:28:99:268,0,233	0/1:48,7:32:99:209,0,368	0/1:55,4:26:99:107,0,315	0/0:95,1:56:72.15:0,72,1666	0/0:78,0:41:6.51:0,7,851	0/0:136,2:75:74.36:0,74,1816	0/1:81,1:41:48.01:48,0,366	0/0:35,0:9:5.45:0,5,195	0/1:23,5:17:99:238,0,176	0/1:167,2:54:63.71:64,0,549	0/0:48,0:27:45.11:0,45,944	0/1:23,6:21:99:237,0,177	0/1:114,3:55:74.41:74,0,568	0/1:38,3:21:92.96:140,0,93	0/0:124,0:50:68.56:0,69,1909	0/1:38,4:18:99:124,0,193	0/1:37,0:16:12.11:12,0,206
chr10	103407277	.	AGAG	A	1202.06	PASS	AB=0.996;AC=16;AF=0.308;AN=52;BaseQRankSum=9.862;DP=1865;FS=67.326;HRun=0;HaplotypeScore=216.8347;InbreedingCoeff=-0.3121;MQ=22.66;MQ0=424;MQRankSum=-7.786;QD=1.15;ReadPosRankSum=1.936;VQSLOD=0.4964;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:115,0:42:49.52:50,0,453	0/1:22,1:10:69.65:94,0,70	./.	./.	0/0:51,0:28:41.27:0,41,632	0/1:56,0:29:99:201,0,258	0/1:87,1:26:99:142,0,140	1/1:67,0:2:4.56:36,5,0	0/1:74,0:27:62.62:63,0,335	0/0:90,2:43:24.62:0,25,1376	0/0:41,0:15:21.07:0,21,417	0/1:72,0:29:99:165,0,215	0/1:57,0:32:99:115,0,363	0/1:58,0:27:55.81:56,0,360	0/0:87,0:52:84.15:0,84,1688	0/0:81,1:44:11.12:0,11,922	0/0:135,0:73:94.52:0,95,1676	0/0:84,0:42:16.45:0,16,470	0/0:37,0:9:14.59:0,15,244	0/1:26,0:17:99:124,0,268	0/1:170,0:55:22.97:23,0,564	0/0:48,0:26:45.14:0,45,866	0/1:31,0:20:99:133,0,115	0/1:125,0:58:14.39:14,0,415	0/1:46,0:23:78.19:78,0,152	0/0:125,0:50:95.06:0,95,1821	0/1:39,0:16:63.05:63,0,221	0/0:36,0:16:6.21:0,6,203
chr10	103407367	.	GGAA	G	161.07	PASS	AB=0.997;AC=9;AF=0.167;AN=54;BaseQRankSum=6.325;DP=2373;DS;FS=8.784;HRun=0;HaplotypeScore=178.4998;InbreedingCoeff=-0.0615;MQ=20.93;MQ0=818;MQRankSum=-4.757;QD=0.35;ReadPosRankSum=-4.400;VQSLOD=0.7164;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:167,0:61:59.74:0,60,819	0/1:19,0:9:7.38:7,0,32	1/1:5,0:1:3.01:31,3,0	0/0:6,0:3:4.57:0,5,56	0/0:64,1:30:42.72:0,43,604	0/1:56,0:17:6.47:6,0,103	0/0:76,0:6:11.72:0,12,86	./.	0/0:80,0:20:20.15:0,20,229	0/1:128,3:45:99:129,0,1324	0/0:59,1:25:23.84:0,24,349	0/0:69,0:13:8.75:0,9,66	0/0:74,0:23:3.16:0,3,26	0/0:72,0:19:9.71:0,10,204	0/0:128,0:55:45.12:0,45,1021	0/0:113,1:47:80.74:0,81,1409	0/0:165,0:91:99:0,115,1940	0/1:109,0:38:13.09:13,0,545	0/0:52,0:5:8.33:0,8,164	0/1:47,0:28:45.64:46,0,167	0/0:223,1:67:49.85:0,50,825	0/0:101,0:48:66.15:0,66,1457	0/1:51,0:21:24.75:25,0,93	0/0:147,0:58:12.06:0,12,554	0/1:45,0:17:32.48:32,0,104	0/0:153,2:48:7.67:0,8,1504	0/0:31,0:8:5.98:0,6,88	0/0:34,0:13:4.38:0,4,242
chr10	103407403	.	GGAT	G	96.29	PASS	AB=0.990;AC=12;AF=0.250;AN=48;BaseQRankSum=6.652;DP=1254;DS;FS=1.907;HRun=0;HaplotypeScore=115.4686;InbreedingCoeff=0.0921;MQ=27.52;MQ0=312;MQRankSum=-3.041;QD=0.29;ReadPosRankSum=-1.292;VQSLOD=1.8973;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:79,0:31:4.37:0,4,382	./.	0/0:49,0:6:9.10:0,9,214	0/0:56,0:13:6.46:0,6,230	0/0:43,1:29:33.36:0,33,609	./.	0/0:26,0:1:2.90:0,3,16	./.	0/0:28,0:9:11.86:0,12,88	0/0:89,0:37:55.92:0,56,1513	0/0:30,2:20:22.38:0,22,380	0/0:18,0:4:2.96:0,3,19	./.	1/1:30,2:9:2.97:20,3,0	0/0:60,1:38:35.94:0,36,770	0/0:67,1:37:52.31:0,52,1349	0/0:102,3:63:63.07:0,63,1415	0/1:57,1:17:30.30:42,0,30	1/1:14,1:3:0.47:1,0,0	0/1:22,0:13:9.22:9,0,112	0/0:106,3:36:13.29:0,13,133	0/0:62,0:40:48.62:0,49,1166	0/1:20,0:9:7.64:8,0,64	0/1:54,2:20:6.61:27,0,7	0/0:18,0:11:4.74:0,5,131	0/1:86,1:36:66:66,0,1036	1/1:14,1:4:3:28,3,0	0/1:22,0:13:21.73:22,0,158
chr10	103407448	.	GGAA	G	108.77	PASS	AB=0.970;AC=14;AF=0.280;AN=50;BaseQRankSum=6.392;DP=1040;FS=5.553;HRun=0;HaplotypeScore=131.0799;InbreedingCoeff=-0.0497;MQ=27.68;MQ0=202;MQRankSum=-5.816;QD=0.21;ReadPosRankSum=-1.959;VQSLOD=1.7016;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:65,6:31:56.93:57,0,157	0/1:8,1:5:1.83:2,0,48	0/0:18,0:2:3.01:0,3,44	0/1:25,0:5:10.07:14,0,10	0/0:47,0:32:39.73:0,40,629	./.	1/1:25,0:4:2.96:19,3,0	./.	0/1:31,1:9:9.01:9,0,84	0/1:77,1:42:35.88:36,0,1251	0/0:35,1:20:8.38:0,8,595	./.	1/1:20,0:9:5.62:29,6,0	0/0:23,1:9:5.40:0,5,120	0/0:62,1:40:61.90:0,62,1106	0/0:53,0:28:40.82:0,41,622	0/1:90,3:56:21.74:22,0,1070	0/0:34,0:11:7.78:0,8,66	0/0:23,0:3:2.98:0,3,21	0/0:23,0:12:8.66:0,9,50	0/1:75,0:26:22.68:28,0,23	0/0:38,0:23:3.32:0,3,531	0/1:13,0:10:0.79:1,0,77	0/1:55,3:24:14.83:15,0,40	0/0:15,0:9:2.94:0,3,18	0/0:70,1:33:10.67:0,11,981	0/1:11,0:4:1.25:12,0,1	0/0:16,0:13:26.47:0,26,378
chr10	103407463	.	GGAC	G	626.67	PASS	AB=0.971;AC=25;AF=0.500;AN=50;BaseQRankSum=4.328;DP=916;FS=10.686;HRun=0;HaplotypeScore=122.5313;InbreedingCoeff=-0.1071;MQ=29.58;MQ0=148;MQRankSum=-6.333;QD=0.98;ReadPosRankSum=-4.904;VQSLOD=-0.0960;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:55,3:22:21.61:62,0,22	0/1:9,0:7:17.16:45,0,17	0/0:30,0:2:6.01:0,6,73	0/1:36,0:10:3.82:4,0,10	0/0:45,2:29:33.20:0,33,379	0/1:19,1:5:0:0,0,0	1/1:19,3:6:8.05:38,8,0	./.	0/1:25,1:8:8.54:9,0,76	0/1:71,3:42:99:201,0,568	0/1:37,1:20:7.39:7,0,298	1/1:14,1:3:2.94:18,3,0	1/1:20,0:13:11.44:62,11,0	0/1:28,0:10:4.84:5,0,41	0/0:51,2:37:20.67:0,21,596	0/1:48,1:28:45.15:45,0,260	0/0:70,3:49:15.63:0,16,569	0/0:24,0:9:2.04:0,2,6	./.	1/1:9,0:4:2.74:12,3,0	1/1:57,0:22:0.91:78,1,0	0/1:31,0:21:27.10:27,0,254	0/1:13,0:8:27.19:27,0,30	0/1:50,3:27:7.04:44,0,7	./.	0/1:66,1:32:78.46:78,0,483	1/1:5,0:3:2.50:9,2,0	0/0:15,0:11:3.48:0,3,204
chr10	103407475	.	GGAA	G	404.53	PASS	AB=0.942;AC=16;AF=0.308;AN=52;BaseQRankSum=7.908;DP=980;FS=3.631;HRun=0;HaplotypeScore=138.3094;InbreedingCoeff=-0.0509;MQ=27.99;MQ0=160;MQRankSum=-5.686;QD=0.81;ReadPosRankSum=-0.131;VQSLOD=2.7203;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:50,3:23:39.72:40,0,54	0/1:8,0:6:5.51:6,0,55	0/0:27,0:1:3.01:0,3,65	0/1:33,0:10:0.02:0,0,55	0/1:53,4:32:23.49:23,0,618	0/0:25,1:8:8.92:0,9,43	0/1:30,0:13:34.67:63,0,35	./.	0/0:33,2:10:8.55:0,9,156	0/1:88,3:47:82.12:82,0,1329	0/0:35,1:19:9.73:0,10,493	1/1:19,0:4:5.97:47,6,0	0/1:22,1:13:26.64:27,0,32	0/1:28,2:11:17.74:36,0,18	0/0:58,1:38:51.65:0,52,1281	0/0:49,2:24:11.87:0,12,607	0/0:73,4:50:33.57:0,34,1261	0/1:18,4:9:0.01:0,0,0	./.	0/0:10,0:4:2.96:0,3,19	0/1:52,6:20:39.78:82,0,40	0/0:41,1:24:31.08:0,31,649	0/1:13,1:8:9.42:60,0,9	0/1:49,6:27:1.93:69,0,2	0/0:11,0:5:0:0,0,0	0/0:68,1:37:34.59:0,35,1249	1/1:6,0:4:2.22:7,2,0	0/0:17,1:13:15.66:0,16,319
chr10	103407481	.	GGAA	G	1052.30	PASS	AB=0.948;AC=21;AF=0.404;AN=52;BaseQRankSum=9.123;DP=1014;FS=2.470;HRun=0;HaplotypeScore=139.8807;InbreedingCoeff=-0.1928;MQ=26.14;MQ0=178;MQRankSum=-5.921;QD=1.51;ReadPosRankSum=-1.851;VQSLOD=2.1229;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:50,4:21:38.64:143,0,39	0/1:8,0:6:19.07:73,0,19	0/0:24,0:1:3.01:0,3,49	0/1:29,0:9:8.08:8,0,37	0/1:57,2:32:34.82:35,0,587	0/0:23,3:8:9.07:0,9,47	0/1:32,1:14:44.85:73,0,45	./.	0/1:36,2:12:3.23:3,0,132	0/1:89,6:50:99:200,0,1445	0/1:34,2:19:62.96:63,0,521	0/1:20,1:5:19.46:32,0,19	0/1:23,1:13:2.84:40,0,3	0/1:24,6:12:18.74:165,0,19	0/1:58,1:38:1.79:2,0,1327	0/0:54,1:26:34.20:0,34,636	0/0:74,3:49:45.98:0,46,1382	0/0:19,2:8:3.01:0,3,42	./.	1/1:10,1:4:5.95:54,6,0	0/1:53,4:20:8.80:9,0,70	0/0:44,2:25:20.25:0,20,660	1/1:13,2:9:8.49:191,8,0	0/1:52,5:28:2.28:71,0,2	0/0:11,0:5:0:0,0,0	0/1:63,5:34:18.29:18,0,1388	1/1:5,0:3:2.94:18,3,0	0/0:18,0:12:10.43:0,10,321
chr10	103407487	.	G	GGGA	701.79	PASS	AB=0.988;AC=12;AF=0.231;AN=52;BaseQRankSum=4.733;DP=1072;FS=27.641;HRun=0;HaplotypeScore=164.2266;InbreedingCoeff=0.0325;MQ=25.68;MQ0=190;MQRankSum=-4.890;QD=2.60;ReadPosRankSum=-4.062;VQSLOD=-0.0195;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:57,0:23:77.09:98,0,77	0/0:8,0:6:6.95:0,7,68	0/0:23,0:1:3:0,3,25	0/0:28,0:8:8.02:0,8,65	0/0:67,0:35:39.23:0,39,613	1/1:28,1:10:8.01:152,8,0	0/1:33,4:16:25.47:380,0,25	./.	0/1:36,0:11:27.52:28,0,145	0/0:94,0:50:99:0,103,1727	0/0:39,0:20:29.84:0,30,479	0/1:20,0:5:43.28:65,0,43	0/1:28,0:15:3.58:4,0,84	0/1:29,0:12:25.08:25,0,161	0/0:61,0:40:86.34:0,86,1346	0/0:54,0:27:31.08:0,31,619	0/0:81,0:52:56.31:0,56,1213	0/0:21,0:8:3.01:0,3,53	./.	1/1:12,0:5:3.44:20,3,0	0/0:57,0:20:13.90:0,14,153	0/0:50,0:26:40.13:0,40,621	0/1:15,0:9:22.55:23,0,58	0/0:58,1:29:8.79:0,9,70	0/0:11,0:5:0:0,0,0	0/0:69,0:35:56.01:0,56,1361	0/1:6,0:4:31.63:49,0,32	0/0:21,0:13:24.42:0,24,425
chr10	103407490	.	G	GGAA	128.04	PASS	AB=0.987;AC=16;AF=0.308;AN=52;BaseQRankSum=6.037;DP=1087;FS=6.101;HRun=0;HaplotypeScore=170.4948;InbreedingCoeff=-0.1787;MQ=25.62;MQ0=198;MQRankSum=-4.255;QD=0.24;ReadPosRankSum=-2.866;VQSLOD=1.9644;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:55,0:24:27.17:27,0,118	0/0:9,0:6:14.38:0,14,134	1/1:22,0:1:2.04:6,2,0	0/0:24,0:8:4.06:0,4,23	0/1:65,0:34:37.55:38,0,433	0/1:30,1:12:14.09:14,0,61	0/1:41,0:18:50.74:55,0,51	./.	0/1:37,1:13:3.46:3,0,145	0/1:93,1:51:37.42:37,0,1236	0/1:38,0:19:3.93:4,0,379	0/1:20,1:5:3.83:4,0,10	0/0:26,1:14:14.09:0,14,135	0/1:31,0:13:16.50:16,0,72	0/0:62,0:40:83.88:0,84,1133	0/0:56,1:29:34.80:0,35,545	0/0:81,0:51:54.04:0,54,1067	0/0:20,1:8:3.01:0,3,51	./.	0/1:13,0:7:11.05:30,0,11	0/0:55,0:18:3.80:0,4,105	0/0:51,0:26:19.49:0,19,493	0/1:16,0:9:17.32:17,0,46	0/1:58,0:28:3.68:4,0,25	1/1:11,0:5:2.22:7,2,0	0/0:71,0:37:23.10:0,23,1124	0/0:6,0:4:2.55:0,3,18	0/0:21,0:13:14.58:0,15,316
chr10	103407496	.	GGAA	G	406.75	PASS	AB=0.983;AC=16;AF=0.320;AN=50;BaseQRankSum=8.241;DP=1074;FS=6.332;HRun=0;HaplotypeScore=155.8474;InbreedingCoeff=-0.1739;MQ=25.73;MQ0=201;MQRankSum=-6.327;QD=0.75;ReadPosRankSum=-1.686;VQSLOD=1.9098;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:55,0:24:36.37:107,0,36	0/1:9,0:6:7.76:8,0,24	./.	0/1:19,0:7:0.63:1,0,12	0/0:64,0:32:3.48:0,3,597	0/0:30,1:12:14.69:0,15,104	0/1:40,0:18:44:44,0,115	./.	0/1:37,0:12:17.42:17,0,166	0/1:92,3:51:73.70:74,0,1403	0/0:37,0:19:9.27:0,9,541	0/1:21,0:5:18.83:19,0,19	0/1:26,0:14:15.70:16,0,47	0/1:33,0:16:17.26:17,0,53	0/1:60,2:40:12.36:12,0,1028	0/0:56,0:30:37.97:0,38,664	0/0:81,1:51:40.16:0,40,1369	0/0:19,0:8:5.98:0,6,54	./.	0/0:14,0:7:6.38:0,6,39	0/1:48,0:17:11.09:11,0,90	0/0:52,2:29:1.51:0,2,614	1/1:14,1:9:13.99:106,14,0	1/1:56,0:29:8.20:56,8,0	0/0:12,0:6:1.25:0,1,3	0/0:68,1:37:5:0,5,1414	0/0:7,0:5:5.86:0,6,35	0/1:18,2:13:61.82:62,0,305
chr10	103407517	.	G	GGGA	166.06	PASS	AB=0.985;AC=11;AF=0.212;AN=52;BaseQRankSum=5.332;DP=903;FS=24.685;HRun=0;HaplotypeScore=139.8977;InbreedingCoeff=-0.1350;MQ=24.38;MQ0=146;MQRankSum=-1.166;QD=0.63;ReadPosRankSum=-1.396;VQSLOD=1.0915;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:18:92.09:92,0,159	0/1:6,0:4:4.35:4,0,96	0/0:28,0:3:2.61:0,3,41	0/0:25,0:6:14.83:0,15,246	0/0:55,0:30:19.19:0,19,519	0/1:26,1:12:74.91:75,0,135	0/1:30,0:17:17.68:18,0,409	./.	0/1:35,0:11:24.25:24,0,204	0/0:79,0:45:99:0,116,1803	0/0:26,0:11:20.88:0,21,316	0/1:24,0:8:10.21:10,0,65	0/1:28,0:16:7.64:8,0,142	0/0:27,0:13:14.67:0,15,247	0/0:49,0:33:53.29:0,53,968	0/0:45,0:25:21.64:0,22,675	0/0:63,0:39:59.81:0,60,1050	0/1:16,1:6:45.15:48,0,45	./.	0/0:12,0:8:12.02:0,12,175	0/0:38,0:17:7.52:0,8,76	0/0:44,0:24:42.14:0,42,719	0/0:12,0:7:11.94:0,12,110	0/1:42,2:22:5.41:5,0,62	1/1:13,0:8:0.34:12,0,0	0/0:55,0:33:87.49:0,87,1296	0/0:6,1:5:9.02:0,9,110	0/0:14,0:9:21.07:0,21,325
chr10	103407520	.	GGAA	G	100.28	PASS	AB=0.978;AC=11;AF=0.204;AN=54;BaseQRankSum=6.438;DP=857;FS=0.000;HRun=0;HaplotypeScore=126.7007;InbreedingCoeff=-0.0622;MQ=24.61;MQ0=136;MQRankSum=-2.594;QD=0.29;ReadPosRankSum=-0.404;VQSLOD=2.2186;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:18:43.51:44,0,84	0/0:6,0:4:6.02:0,6,85	0/0:29,0:3:6.28:0,6,35	0/0:26,0:6:15.05:0,15,230	0/1:51,0:27:22.86:23,0,349	0/0:23,2:12:23.35:0,23,191	0/0:29,0:16:13.45:0,13,260	./.	0/0:30,3:11:2.58:0,3,118	0/0:75,0:42:57.94:0,58,1575	0/0:24,0:9:18.41:0,18,266	0/0:24,0:8:1.71:0,2,34	0/0:24,0:12:16.99:0,17,190	0/1:27,0:14:12.19:12,0,136	0/1:45,3:32:46.80:47,0,703	0/1:42,2:25:51.84:52,0,718	0/0:57,1:37:48.96:0,49,941	0/0:17,0:7:2.92:0,3,21	0/1:17,0:2:0:0,0,0	0/1:12,0:8:0.31:0,0,78	0/0:38,0:17:5.02:0,5,48	0/0:41,1:23:41.90:0,42,656	0/0:11,0:6:6.16:0,6,27	0/1:41,1:21:20.01:28,0,20	1/1:13,0:8:4.73:16,5,0	0/1:50,1:32:7.36:7,0,1131	0/0:8,0:5:8.94:0,9,93	0/0:14,0:9:18.04:0,18,304
chr10	103407526	.	GGAA	G	337.68	PASS	AB=0.970;AC=14;AF=0.259;AN=54;BaseQRankSum=5.317;DP=771;FS=0.000;HRun=0;HaplotypeScore=118.0917;InbreedingCoeff=-0.1493;MQ=24.87;MQ0=107;MQRankSum=-2.883;QD=0.97;ReadPosRankSum=0.335;VQSLOD=2.1042;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:17:51.14:51,0,63	0/1:4,1:3:13.97:32,0,14	0/0:30,0:3:6.49:0,6,100	0/0:28,0:6:15.05:0,15,345	0/1:44,1:22:15.21:15,0,267	0/0:20,1:11:11.21:0,11,122	0/0:27,1:16:24.35:0,24,197	./.	0/1:29,2:11:34.58:35,0,64	0/0:67,1:39:16.99:0,17,1289	0/0:19,0:7:12.51:0,13,242	0/1:22,1:8:37.88:38,0,47	0/0:21,1:11:14.97:0,15,105	0/1:23,0:14:50.26:71,0,50	0/1:44,0:31:27.41:27,0,668	0/1:41,2:25:54.58:55,0,725	0/0:47,1:30:19.38:0,19,799	0/1:15,0:7:0.77:1,0,14	0/0:16,0:5:8.99:0,9,94	1/1:9,1:7:5.98:70,6,0	0/1:31,0:16:4.37:4,0,76	0/0:40,0:23:40.15:0,40,634	0/0:9,0:5:7.95:0,8,46	0/1:36,1:18:9.48:9,0,43	0/1:10,0:6:3.65:75,0,4	0/0:47,1:30:3.88:0,4,1111	0/0:7,0:5:6:0,6,58	0/0:13,0:8:11.92:0,12,226
chr10	103407529	.	A	AGAG	970.63	PASS	AB=0.955;AC=21;AF=0.389;AN=54;BaseQRankSum=4.877;DP=719;FS=64.206;HRun=0;HaplotypeScore=114.9700;InbreedingCoeff=0.0687;MQ=25.32;MQ0=93;MQRankSum=-2.145;QD=2.88;ReadPosRankSum=0.116;VQSLOD=-0.5132;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,2:16:0.77:146,0,1	0/1:5,0:3:25.93:32,0,26	0/0:31,0:3:5.91:0,6,62	0/0:28,0:6:14.83:0,15,241	0/0:39,0:18:2.52:0,3,209	0/1:18,2:11:16.02:94,0,16	0/1:23,4:16:2.68:200,0,3	./.	1/1:28,1:11:6.63:76,7,0	0/0:62,1:36:67.21:0,67,1055	0/0:17,0:7:11.90:0,12,149	0/1:20,1:7:12.27:89,0,12	0/1:21,1:11:57.14:82,0,57	0/1:19,2:12:17.63:129,0,18	0/0:43,0:31:3.84:0,4,454	0/1:41,0:25:58.01:58,0,487	0/0:44,0:27:20.48:0,20,480	1/1:14,0:6:1.72:4,2,0	0/0:12,0:5:8.75:0,9,51	1/1:9,0:7:5.94:41,6,0	0/1:28,0:16:4.96:5,0,51	0/0:36,0:23:39.54:0,40,506	0/1:8,0:4:3.20:3,0,44	0/0:34,0:16:3.06:0,3,43	1/1:8,1:6:8.98:107,9,0	0/1:48,0:30:14.07:14,0,758	1/1:6,1:5:5.81:48,6,0	0/0:13,0:8:9.02:0,9,132
chr10	103407727	.	G	GGAA	466.25	PASS	AB=0.897;AC=21;AF=0.438;AN=48;BaseQRankSum=3.816;DP=202;FS=29.637;HRun=0;HaplotypeScore=54.6856;InbreedingCoeff=0.1907;MQ=28.76;MQ0=4;MQRankSum=-1.712;QD=4.28;ReadPosRankSum=-1.783;VQSLOD=-0.1335;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,1:6:4.07:114,0,4	1/1:2,0:2:2.82:20,3,0	./.	0/0:2,0:2:0:0,0,0	0/0:11,0:9:6.02:0,6,37	0/1:3,1:1:0:0,0,0	0/0:1,0:1:0:0,0,0	0/1:10,0:4:9.91:28,0,10	0/1:8,4:6:6.04:83,0,6	0/1:15,0:10:12.99:13,0,113	0/0:7,0:5:5.96:0,6,45	1/1:4,3:5:6.25:90,6,0	./.	1/1:10,0:9:8.91:61,9,0	0/1:11,0:9:0.66:1,0,73	0/0:15,0:11:20.70:0,21,122	0/0:11,0:9:14.15:0,14,85	1/1:5,0:4:2.88:22,3,0	0/1:6,0:4:10.80:11,0,34	1/1:2,0:1:2.50:9,2,0	0/1:5,1:6:5.67:30,0,6	0/0:11,0:5:8.81:0,9,52	./.	./.	1/1:3,1:3:5.98:76,6,0	0/0:18,0:11:25.38:0,25,152	0/1:5,2:4:11.63:50,0,12	0/0:12,0:11:23.74:0,24,161
chr10	103407745	.	G	GGAT	135.69	PASS	AB=0.976;AC=19;AF=0.339;AN=56;BaseQRankSum=6.864;DP=342;FS=5.992;HRun=0;HaplotypeScore=69.7111;InbreedingCoeff=-0.1334;MQ=29.43;MQ0=8;MQRankSum=-3.737;QD=0.66;ReadPosRankSum=1.593;VQSLOD=0.6242;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:10:23.69:27,0,24	1/1:3,0:3:4.57:16,5,0	1/1:10,0:1:0.47:1,0,0	0/0:9,0:3:5.95:0,6,65	0/0:15,0:13:14.88:0,15,152	0/1:8,0:2:0.15:0,0,8	0/0:7,0:7:0.47:0,0,1	0/0:11,0:5:6.82:0,7,69	0/1:13,0:8:10.89:11,0,151	0/1:27,0:20:7.20:7,0,484	0/0:12,0:9:9.03:0,9,137	0/1:14,0:9:22.46:44,0,22	0/1:11,0:8:2.22:2,0,19	1/1:13,0:12:7.49:26,7,0	0/0:17,0:14:27.68:0,28,351	0/1:19,1:16:15.41:15,0,447	0/1:12,2:12:49.50:49,0,152	0/1:5,0:4:4.63:7,0,5	0/0:10,0:6:3.22:0,3,55	0/1:8,0:6:7.88:8,0,14	0/0:8,0:8:2.43:0,2,33	0/0:19,0:11:2.13:0,2,189	0/0:7,0:5:2.96:0,3,19	0/0:4,0:4:3.86:0,4,23	0/1:12,0:11:23.29:25,0,23	0/1:22,1:16:23.34:23,0,513	0/1:9,0:5:13.66:14,0,19	0/0:16,0:15:39.11:0,39,626
chr10	103407757	.	A	AGAG	4080.35	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=3.152;DP=425;FS=1.115;HRun=0;HaplotypeScore=74.3247;InbreedingCoeff=0.8909;MQ=48.63;MQ0=8;MQRankSum=-4.810;QD=20.71;ReadPosRankSum=-1.205;VQSLOD=3.3417;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,7:13:27.05:477,27,0	1/1:0,7:9:5.84:129,6,0	0/0:20,0:8:15.03:0,15,174	0/0:17,0:10:17.37:0,17,206	0/0:20,0:18:30.03:0,30,402	1/1:5,4:3:9.03:181,9,0	1/1:0,14:14:3.01:56,3,0	1/1:13,0:8:9.02:121,9,0	1/1:7,6:8:12.04:203,12,0	0/0:29,0:22:24.03:0,24,677	0/0:17,0:15:26.93:0,27,338	1/1:12,6:13:27.08:444,27,0	1/1:9,5:10:20.94:294,21,0	1/1:0,14:13:9.03:194,9,0	0/0:18,0:15:24.94:0,25,382	0/0:20,0:16:28.78:0,29,448	0/0:19,0:17:12.44:0,12,307	1/1:3,3:5:15.05:302,15,0	1/1:8,3:8:17.96:287,18,0	1/1:10,2:11:18.04:224,18,0	1/1:6,3:9:15.04:179,15,0	0/0:20,0:13:27.01:0,27,342	1/1:6,2:7:18.04:207,18,0	1/1:2,4:6:6.02:95,6,0	1/1:10,3:12:33.11:502,33,0	0/0:27,0:19:36.38:0,36,614	1/1:7,5:8:8.88:186,9,0	0/0:20,0:19:51.16:0,51,768
chr10	103409226	.	G	GA	1199.63	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=3.732;DP=430;FS=9.714;HRun=9;HaplotypeScore=116.9756;InbreedingCoeff=0.9220;MQ=45.86;MQ0=20;MQRankSum=-6.544;QD=15.00;ReadPosRankSum=-4.522;VQSLOD=1.6558;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:24:44.83:0,45,361	0/0:6,0:6:8.95:0,9,67	./.	./.	0/0:19,1:22:25.09:0,25,422	0/0:16,0:15:29.90:0,30,237	0/0:16,0:16:26.97:0,27,230	1/1:11,10:20:41.44:490,41,0	0/0:12,0:12:29.93:0,30,249	0/0:20,0:20:44.95:0,45,384	0/0:18,0:18:41.94:0,42,357	0/0:7,1:7:14.95:0,15,119	0/0:16,0:14:32.86:0,33,260	0/0:13,0:13:29.96:0,30,252	0/0:20,0:20:56.99:0,57,495	0/0:16,0:16:38.98:0,39,338	0/0:30,0:30:67.26:0,67,680	0/0:19,0:16:8.14:0,8,141	1/1:11,9:18:31.88:324,32,0	1/1:9,2:11:19.37:141,19,0	1/1:2,6:6:9.02:99,9,0	0/0:15,0:15:38.02:0,38,315	0/0:5,0:5:5.97:0,6,44	0/0:18,0:15:23.92:0,24,197	0/0:16,1:16:29.01:0,29,236	0/0:13,0:13:35.98:0,36,312	1/1:6,13:19:30.05:313,30,0	0/0:5,0:5:14.94:0,15,122
chr10	103409232	.	A	AAAAAG	1415.62	PASS	AB=1.000;AC=8;AF=0.154;AN=52;BaseQRankSum=2.914;DP=441;FS=13.186;HRun=0;HaplotypeScore=142.5182;InbreedingCoeff=0.6533;MQ=45.89;MQ0=20;MQRankSum=-4.787;QD=13.88;ReadPosRankSum=-5.037;VQSLOD=0.5355;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:23:44.99:0,45,519	0/0:5,0:5:8.54:0,9,143	./.	./.	0/0:25,0:25:33.19:0,33,975	0/0:15,0:14:29.09:0,29,378	0/0:14,0:14:25.81:0,26,235	1/1:26,0:24:49.09:552,49,0	0/0:11,0:11:30.50:0,30,330	0/0:20,0:20:54.09:0,54,738	0/0:17,0:17:45.08:0,45,668	0/0:7,0:6:15.03:0,15,200	0/0:17,0:15:33.03:0,33,428	0/0:11,0:11:28.72:0,29,284	0/0:20,0:20:57.12:0,57,862	0/0:17,0:17:45.09:0,45,707	0/0:31,0:31:67.41:0,67,1184	0/0:13,0:10:8.17:0,8,167	1/1:26,0:23:25.43:347,25,0	1/1:3,18:23:38.72:595,39,0	0/1:8,0:7:14.42:39,0,14	0/0:16,0:15:42.10:0,42,645	0/0:5,0:5:6.02:0,6,98	0/0:17,0:13:23.95:0,24,224	0/0:17,0:15:29.05:0,29,270	0/0:15,0:15:42.04:0,42,524	0/1:19,0:18:23.51:33,0,24	0/0:6,0:6:17.95:0,18,209
chr10	103409262	.	AAGAG	A	5129.47	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=12.411;DP=526;FS=0.354;HRun=0;HaplotypeScore=149.0277;InbreedingCoeff=0.6709;MQ=52.81;MQ0=8;MQRankSum=-6.850;QD=16.13;ReadPosRankSum=-4.986;VQSLOD=3.3006;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,7:24:62.79:568,63,0	1/1:4,3:7:21.04:219,21,0	0/0:11,0:4:11.95:0,12,102	0/0:10,0:6:1.29:0,1,38	0/0:25,0:25:69:0,69,1225	1/1:7,9:15:41.87:402,42,0	1/1:12,2:14:38.82:318,39,0	1/1:36,0:34:83.41:659,83,0	1/1:7,3:10:23.90:217,24,0	0/0:25,0:25:72.16:0,72,1090	0/0:23,0:23:59.73:0,60,1005	1/1:9,4:13:38.62:347,39,0	1/1:11,6:17:21:242,21,0	1/1:14,2:16:44.78:373,45,0	0/0:22,0:22:63.09:0,63,1137	0/0:17,0:17:51:0,51,943	0/0:28,0:27:77.99:0,78,1252	1/1:17,1:15:22.49:265,22,0	0/1:24,0:22:96.64:221,0,97	0/1:31,0:31:99:191,0,279	0/1:8,0:8:41.94:42,0,82	0/0:16,0:16:48.02:0,48,852	1/1:0,15:15:11.91:110,12,0	1/1:23,1:21:50.67:414,51,0	1/1:17,2:18:44.89:405,45,0	0/0:19,0:19:57.04:0,57,810	0/1:23,0:23:99:136,0,271	0/0:12,0:12:30.05:0,30,474
chr10	103409272	.	GAAAGAAAGAAAA	G	7941.80	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=12.608;DP=533;FS=6.250;HRun=0;HaplotypeScore=218.4226;InbreedingCoeff=0.6297;MQ=54.72;MQ0=5;MQRankSum=-6.788;QD=25.45;ReadPosRankSum=-1.433;VQSLOD=3.2339;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:28:27.83:1059,28,0	1/1:8,0:8:21.52:448,22,0	0/0:15,0:7:21.05:0,21,451	0/0:11,0:7:10.14:0,10,156	0/0:24,0:24:66.22:0,66,3118	1/1:15,0:14:39.02:914,39,0	1/1:16,0:16:38.88:520,39,0	0/1:32,0:30:99:319,0,407	1/1:8,0:8:24.03:464,24,0	0/0:23,0:23:69.24:0,69,2919	0/0:25,0:25:71.83:0,72,2983	1/1:15,0:15:38.99:662,39,0	1/1:6,11:17:20.92:753,21,0	1/1:15,0:15:37.17:534,37,0	0/0:25,0:25:75.26:0,75,3153	0/0:17,0:17:48.16:0,48,2497	0/0:32,0:31:96.32:0,96,3466	1/1:20,0:17:35.88:512,36,0	0/1:15,0:14:99:108,0,577	0/1:31,0:31:99:105,0,1855	0/1:9,0:9:69.94:70,0,372	0/0:16,0:16:48.16:0,48,2201	1/1:17,0:17:12:270,12,0	1/1:23,0:20:53.81:564,54,0	1/1:15,0:15:44.81:600,45,0	0/0:21,0:21:63.22:0,63,2533	0/1:25,0:25:41.04:41,0,1573	0/0:12,0:12:36.12:0,36,1709
chr10	103409276	.	GAAAGAAAA	G	5913.49	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=12.462;DP=539;FS=4.847;HRun=0;HaplotypeScore=185.7975;InbreedingCoeff=0.6317;MQ=58.19;MQ0=5;MQRankSum=-4.637;QD=19.01;ReadPosRankSum=-0.476;VQSLOD=3.9854;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,7:27:40.80:725,41,0	1/1:5,3:8:20.49:289,20,0	0/0:21,0:11:23.14:0,23,493	0/0:14,0:9:11.34:0,11,186	0/0:24,0:24:63.20:0,63,2347	1/1:7,9:15:42.48:645,42,0	1/1:11,2:13:35.93:357,36,0	0/1:33,0:31:99:434,0,120	1/1:7,3:10:29.90:364,30,0	0/0:22,0:22:66.23:0,66,2289	0/0:27,0:27:78.08:0,78,2384	1/1:10,4:14:35.96:444,36,0	1/1:11,6:17:21.07:480,21,0	1/1:10,2:12:28.77:331,29,0	0/0:25,0:25:75.26:0,75,2509	0/0:17,0:17:51.16:0,51,1876	0/0:29,0:28:87.29:0,87,2684	1/1:17,1:16:38.02:333,38,0	0/1:18,0:17:99:159,0,320	0/1:34,0:34:99:167,0,1014	0/1:11,0:11:83.48:83,0,250	0/0:16,0:16:48.16:0,48,1606	1/1:13,2:15:12.28:180,12,0	1/1:21,1:19:50.68:438,51,0	1/1:12,2:14:35.66:403,36,0	0/0:21,0:21:63.21:0,63,2034	0/1:25,0:25:81.28:81,0,897	0/0:12,0:12:36.12:0,36,1289
chr10	103410025	.	CACA	C	15484.60	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=13.216;DP=587;FS=11.955;HRun=0;HaplotypeScore=117.6515;InbreedingCoeff=0.9940;MQ=70.91;MQ0=4;MQRankSum=-10.109;QD=41.29;ReadPosRankSum=4.013;VQSLOD=6.0684;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:29:66.07:1115,66,0	1/1:0,12:14:30.09:488,30,0	0/0:17,0:17:44.98:0,45,603	0/0:27,0:22:43.41:0,43,1106	0/0:23,0:23:66.20:0,66,1409	1/1:0,20:20:54.19:1004,54,0	1/1:0,27:27:60.16:1057,60,0	1/1:0,22:22:51.16:894,51,0	1/1:0,23:23:51.17:949,51,0	0/0:19,0:19:57.18:0,57,1135	0/0:6,0:6:18.04:0,18,332	1/1:0,25:25:69.24:1248,69,0	1/1:0,13:13:33.11:613,33,0	1/1:0,22:22:63.15:1134,63,0	0/0:16,0:16:48.16:0,48,1072	0/0:13,0:13:39.13:0,39,846	0/0:38,0:38:99:0,114,2358	1/1:1,33:33:87.77:1608,88,0	1/1:0,19:19:54.17:937,54,0	1/1:0,10:10:15.05:279,15,0	1/1:0,31:31:58.55:1032,59,0	0/0:12,0:12:33.11:0,33,674	1/1:1,10:10:15:242,15,0	1/1:0,32:33:68.76:1284,69,0	1/1:0,17:17:27.09:502,27,0	0/0:26,0:26:75.25:0,75,1606	1/1:0,23:23:60.21:1098,60,0	0/0:15,0:15:45.15:0,45,999
chr10	103411086	.	G	GCCCCGAGTTCTGGA	48404.33	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-5.895;DP=665;FS=2.853;HRun=0;HaplotypeScore=192.7643;InbreedingCoeff=0.9904;MQ=77.16;MQ0=0;MQRankSum=-18.238;QD=112.31;ReadPosRankSum=0.215;VQSLOD=4.9887;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,15:53:87.30:5164,87,0	1/1:6,4:13:27.09:1373,27,0	0/0:28,0:28:75.24:0,75,2237	0/0:16,0:16:42.07:0,42,1313	0/0:28,0:28:72.21:0,72,2556	1/1:12,18:35:84.29:5556,84,0	1/1:16,6:38:57.19:3357,57,0	1/1:21,0:21:57.19:2918,57,0	1/1:9,10:22:57.20:3602,57,0	0/0:26,0:26:72.23:0,72,2686	0/0:13,0:13:30.09:0,30,1074	1/1:10,19:38:78.27:5088,78,0	1/1:6,8:26:42.14:2391,42,0	1/1:10,13:30:66.23:4288,66,0	0/0:21,0:21:60.21:0,60,2494	0/0:14,0:14:39.13:0,39,1606	0/0:37,0:37:99:0,108,4085	1/1:7,3:17:21.07:1377,21,0	1/1:14,7:29:75.23:3801,75,0	1/1:2,9:16:27.09:1716,27,0	1/1:12,2:26:24.08:1398,24,0	0/0:22,0:22:63.21:0,63,2199	1/1:2,3:12:15.05:1001,15,0	1/1:2,5:14:18.06:1140,18,0	1/1:3,1:6:12.04:781,12,0	0/0:22,0:22:63.21:0,63,2259	1/1:10,10:35:54.15:3452,54,0	0/0:7,0:7:21.07:0,21,880
chr10	103412819	.	GTA	G	7204.06	PASS	AB=0.931;AC=36;AF=0.643;AN=56;BaseQRankSum=13.466;DP=496;FS=1.303;HRun=0;HaplotypeScore=80.7639;InbreedingCoeff=0.8763;MQ=69.63;MQ0=0;MQRankSum=0.824;QD=20.94;ReadPosRankSum=2.877;VQSLOD=5.1083;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,23:30:63.17:788,63,0	1/1:1,11:12:27.09:338,27,0	0/0:8,0:7:8.89:0,9,101	0/0:7,0:5:8.64:0,9,65	0/1:13,1:14:1.25:1,0,498	1/1:1,20:21:39.12:488,39,0	1/1:2,11:13:24.08:300,24,0	1/1:10,21:33:68.86:799,69,0	1/1:1,10:12:26.92:314,27,0	0/0:16,0:16:42.14:0,42,671	0/0:25,1:26:25.69:0,26,918	1/1:6,15:21:30.10:375,30,0	1/1:2,9:11:27.09:338,27,0	1/1:3,9:12:24.08:300,24,0	0/0:15,0:15:42.14:0,42,684	0/0:22,0:22:57.18:0,57,903	0/0:26,1:26:25.71:0,26,885	1/1:3,10:13:21.07:263,21,0	1/1:3,13:17:41.95:485,42,0	1/1:6,19:25:45.14:563,45,0	1/1:4,10:15:20.90:239,21,0	0/0:10,0:10:15.05:0,15,241	1/1:3,15:19:32.93:389,33,0	1/1:4,11:15:7.19:211,7,0	1/1:4,22:26:38.96:488,39,0	0/0:21,0:21:51.17:0,51,818	1/1:2,20:22:42.13:525,42,0	0/1:12,1:13:1.45:1,0,471
chr10	103413086	.	TTC	T	186.52	PASS	AB=0.923;AC=12;AF=0.231;AN=52;BaseQRankSum=1.404;DP=501;FS=13.937;HRun=0;HaplotypeScore=69.4638;InbreedingCoeff=-0.1419;MQ=60.93;MQ0=11;MQRankSum=-1.169;QD=0.95;ReadPosRankSum=1.182;VQSLOD=0.1747;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:2.94:0,3,26	0/0:5,0:7:5.87:0,6,41	1/1:33,0:12:0.47:1,0,0	./.	0/0:11,0:10:2.60:0,3,10	0/1:15,0:16:5.13:5,0,61	0/0:21,0:20:15.01:0,15,177	0/0:17,0:17:6.02:0,6,78	0/0:23,0:22:2.73:0,3,24	0/0:8,0:8:7.27:0,7,92	./.	0/0:17,0:16:5.94:0,6,65	0/0:24,0:23:1.25:0,1,34	0/1:16,0:16:22.16:22,0,40	0/1:15,1:16:23.60:24,0,80	0/1:22,3:25:61.80:62,0,307	0/1:16,4:20:38.55:39,0,261	0/0:14,0:13:5.99:0,6,50	0/0:16,0:16:6.02:0,6,84	0/1:10,1:11:18.77:27,0,19	0/1:35,0:35:14.56:15,0,195	0/0:12,0:12:9.03:0,9,134	0/0:15,0:15:3:0,3,26	0/0:20,0:21:8.29:0,8,48	0/0:14,0:14:3:0,3,26	1/1:11,2:13:6.01:65,6,0	0/0:11,0:10:9.03:0,9,128	0/1:10,2:10:35.60:56,0,36
chr10	103413843	.	GTCACACA	G	6144.92	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.936;DP=731;FS=9.696;HRun=0;HaplotypeScore=167.2176;InbreedingCoeff=0.9967;MQ=76.41;MQ0=0;MQRankSum=-11.082;QD=50.37;ReadPosRankSum=-3.266;VQSLOD=3.2761;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,3710	0/0:9,0:9:24.08:0,24,912	0/0:33,0:32:96.32:0,96,2988	0/0:29,0:29:53.40:0,53,2363	0/0:26,0:26:78.27:0,78,3038	0/0:29,0:29:84.27:0,84,3170	0/0:23,0:22:69.24:0,69,2610	1/1:1,22:23:66.23:1473,66,0	0/0:30,0:30:90.31:0,90,3180	0/0:42,0:41:99:0,120,4504	0/0:18,0:18:54.19:0,54,2139	0/0:27,0:27:66.23:0,66,2470	0/0:26,0:26:75.26:0,75,2767	0/0:23,0:23:69.24:0,69,2588	0/0:25,0:25:72.25:0,72,2810	0/0:20,0:20:60.21:0,60,2275	0/0:35,0:35:99:0,105,3889	0/0:26,0:26:78.27:0,78,2880	1/1:3,24:27:72.25:1674,72,0	1/1:2,16:18:33.11:842,33,0	1/1:3,22:25:21.07:532,21,0	0/0:24,0:24:72.25:0,72,2800	0/0:22,0:22:60.18:0,60,2226	0/0:31,0:31:93.30:0,93,3402	0/0:33,0:33:99:0,99,3626	0/0:36,0:36:99:0,105,3902	1/1:1,28:29:63.22:1625,63,0	0/0:6,0:6:18.06:0,18,720
chr10	103415790	.	CAAAGAAAGAAAG	C	3844.62	PASS	AB=0.786;AC=22;AF=0.407;AN=54;BaseQRankSum=4.933;DP=606;FS=5.590;HRun=0;HaplotypeScore=182.5304;InbreedingCoeff=0.8089;MQ=71.93;MQ0=7;MQRankSum=-2.068;QD=15.82;ReadPosRankSum=0.010;VQSLOD=2.4532;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:6.36:468,6,0	1/1:12,0:12:15.05:293,15,0	0/0:18,0:16:3:0,3,25	./.	0/0:31,0:31:42.11:0,42,1177	1/1:9,20:29:15.05:502,15,0	1/1:16,0:16:21.07:460,21,0	0/0:29,0:27:21.07:0,21,400	1/1:7,14:21:12.04:401,12,0	0/0:37,0:37:72.24:0,72,2615	0/0:20,0:20:39.13:0,39,1389	1/1:9,10:18:9.03:268,9,0	1/1:12,12:24:5.89:204,6,0	1/1:8,13:21:15.05:505,15,0	0/0:21,0:20:27.08:0,27,1014	0/0:24,0:23:36.12:0,36,1375	0/0:20,0:18:30.02:0,30,1043	0/1:3,0:12:12.89:70,0,13	0/0:19,0:17:29.10:0,29,1015	0/0:26,0:26:54.18:0,54,1828	0/0:9,0:9:18.06:0,18,516	0/0:11,0:25:12.82:0,13,321	0/1:29,0:29:0:0,0,0	1/1:21,0:19:20.78:368,21,0	1/1:6,11:17:9.03:306,9,0	0/0:17,0:17:27.09:0,27,1053	0/0:36,0:32:54.14:0,54,1581	0/0:15,0:15:41.17:0,41,1427
chr10	103415823	.	AAAGAAAGAAAGAAAGG	A	4643.71	PASS	AB=1.000;AC=20;AF=0.370;AN=54;BaseQRankSum=5.228;DP=598;FS=0.467;HRun=0;HaplotypeScore=190.3097;InbreedingCoeff=0.7894;MQ=46.37;MQ0=93;MQRankSum=-4.396;QD=21.11;ReadPosRankSum=-0.503;VQSLOD=3.8051;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:23:8.89:298,0,9	1/1:8,0:7:15.05:358,15,0	0/0:1,0:1:3:0,3,25	./.	0/0:26,0:25:65.74:0,66,1566	1/1:33,0:27:28.64:664,29,0	1/1:17,0:15:29.77:532,30,0	0/0:28,0:24:45.55:0,46,571	1/1:21,0:17:17.95:520,18,0	0/0:33,0:28:78.17:0,78,3064	0/0:27,0:16:48.14:0,48,1712	1/1:17,0:13:14.50:352,15,0	1/1:20,0:17:14.81:299,15,0	1/1:17,0:15:21.02:646,21,0	0/0:17,0:15:41.77:0,42,1270	0/0:28,0:26:42.55:0,43,1953	0/0:22,0:16:44.83:0,45,1302	0/1:15,0:13:24.07:121,0,24	0/0:25,0:17:41.01:0,41,1348	0/0:27,0:22:60.15:0,60,2139	0/0:13,0:8:23.89:0,24,640	0/0:22,0:22:30.50:0,30,603	0/0:4,21:23:0.47:0,0,1	1/1:28,0:20:32.11:462,32,0	1/1:16,0:14:14.47:391,14,0	0/0:25,0:23:68.84:0,69,1602	0/0:41,0:26:68.93:0,69,1991	0/0:18,0:14:41.17:0,41,1655
chr10	103416559	.	G	GGA	3709.44	PASS	AB=0.782;AC=24;AF=0.429;AN=56;BaseQRankSum=-3.541;DP=378;FS=17.911;HRun=0;HaplotypeScore=75.8194;InbreedingCoeff=-0.7789;MQ=47.52;MQ0=0;MQRankSum=-5.837;QD=11.01;ReadPosRankSum=2.989;VQSLOD=1.6188;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:18,3:21:99:127,0,360	0/1:3,2:5:96.33:96,0,100	0/0:4,1:4:9.03:0,9,124	0/1:5,1:6:52.96:53,0,164	0/1:16,4:20:90.26:90,0,183	0/1:6,5:10:99:201,0,182	0/1:16,1:17:41.25:41,0,239	0/1:12,3:14:99:143,0,153	0/1:3,4:7:64.89:175,0,65	0/1:15,9:24:99:460,0,431	0/1:10,7:17:49.62:263,0,50	0/1:8,4:12:95.23:207,0,95	0/1:7,4:10:99:169,0,172	0/0:8,0:8:2.28:0,2,67	0/1:13,6:19:99:242,0,348	0/1:15,2:17:88.52:89,0,434	0/1:18,2:20:71.79:72,0,590	0/1:7,2:9:94.69:95,0,157	0/1:14,3:17:99:151,0,391	0/1:6,4:10:76.06:100,0,76	0/0:14,0:14:16.96:0,17,147	0/1:13,5:18:99:199,0,181	0/1:6,4:9:12.43:161,0,12	0/0:14,0:14:9.46:0,9,100	0/1:7,3:10:34.78:186,0,35	0/1:23,4:27:99:176,0,729	0/1:6,3:8:99:110,0,136	0/1:2,3:4:79.74:104,0,80
chr10	103418705	.	GCTCA	G	1149.44	PASS	AB=0.780;AC=11;AF=0.196;AN=56;BaseQRankSum=10.919;DP=830;FS=0.576;HRun=0;HaplotypeScore=225.6028;InbreedingCoeff=-0.2307;MQ=55.13;MQ0=6;MQRankSum=-10.426;QD=3.47;ReadPosRankSum=-1.007;VQSLOD=2.4509;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,7:44:4.41:4,0,1072	0/1:8,3:12:97.02:97,0,410	0/0:51,0:29:80.74:0,81,1875	0/0:50,0:28:66.37:0,66,1463	0/0:32,0:32:90.24:0,90,2554	0/1:20,10:30:29.88:30,0,666	0/1:28,14:43:99:223,0,725	0/0:33,2:34:60.50:0,60,2697	0/1:19,8:28:47.90:48,0,1168	0/0:31,0:31:87.05:0,87,2503	0/0:19,0:19:54.19:0,54,1549	0/1:29,6:36:10.97:11,0,939	0/1:20,9:30:99:242,0,1196	0/1:22,6:29:5.78:6,0,1274	0/0:30,0:30:84.29:0,84,2418	0/0:16,0:16:48.16:0,48,1383	0/0:37,0:37:99:0,105,3039	0/1:19,6:27:99:281,0,1373	0/1:13,3:17:99:167,0,939	0/0:18,3:24:18.06:0,18,493	0/0:34,4:39:45.82:0,46,1265	0/0:19,0:19:51.16:0,51,1475	0/0:24,3:28:23.35:0,23,1028	0/0:14,4:18:17.70:0,18,486	0/0:16,6:22:20.46:0,20,608	0/0:28,0:28:81.28:0,81,2308	0/1:24,7:33:99:184,0,1373	0/0:13,0:13:39.13:0,39,1130
chr10	103418721	.	GCA	G	1263.12	PASS	AB=0.894;AC=13;AF=0.232;AN=56;BaseQRankSum=10.090;DP=859;FS=7.861;HRun=0;HaplotypeScore=221.5337;InbreedingCoeff=-0.3172;MQ=54.16;MQ0=7;MQRankSum=-7.381;QD=2.97;ReadPosRankSum=-0.429;VQSLOD=1.6992;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:45,2:47:34.74:35,0,400	0/1:11,0:11:13.04:13,0,130	0/0:53,0:23:13.49:0,13,851	0/0:52,0:27:34.84:0,35,665	0/0:28,0:28:75.64:0,76,1426	0/1:30,3:33:83.60:84,0,308	0/1:43,3:46:99:144,0,236	0/1:31,12:39:99:332,0,1409	0/0:23,3:26:21.42:0,21,518	0/0:28,0:28:77.84:0,78,1360	0/0:18,0:18:54.18:0,54,1040	0/1:35,4:38:69.60:70,0,554	0/1:27,3:30:99:154,0,444	0/1:27,2:29:33.98:34,0,449	0/0:32,0:32:90.14:0,90,1711	0/0:15,0:15:45.15:0,45,857	0/0:42,0:42:99:0,120,2245	0/1:25,1:26:57.74:58,0,553	0/1:19,2:19:57.35:57,0,615	0/0:14,12:26:9.03:0,9,145	0/1:25,21:45:67.55:68,0,340	0/0:21,0:21:57.16:0,57,1044	0/0:29,0:29:5.18:0,5,481	0/0:25,0:24:7.85:0,8,199	0/1:24,0:24:25.85:26,0,298	0/0:21,0:21:63.21:0,63,1208	0/1:18,12:30:99:343,0,357	0/0:16,0:16:45.15:0,45,845
chr10	103419212	.	CA	C	5309.44	PASS	AB=0.833;AC=35;AF=0.625;AN=56;BaseQRankSum=12.734;DP=439;FS=0.882;HRun=10;HaplotypeScore=64.1011;InbreedingCoeff=0.9021;MQ=76.36;MQ0=0;MQRankSum=-1.144;QD=18.96;ReadPosRankSum=1.662;VQSLOD=5.7850;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:19:41.03:344,41,0	1/1:0,6:6:12:104,12,0	0/0:12,0:10:14.22:0,14,160	0/0:12,0:11:8.89:0,9,78	0/0:21,0:21:54.13:0,54,588	1/1:2,17:19:44.99:391,45,0	1/1:2,6:8:17.99:156,18,0	1/1:4,23:27:68.92:588,69,0	1/1:1,14:15:35.99:313,36,0	0/0:13,0:13:33.09:0,33,365	0/0:16,2:18:22.07:0,22,465	1/1:1,7:8:20.99:182,21,0	1/1:1,19:20:47.99:417,48,0	1/1:2,10:12:23.99:208,24,0	0/0:20,0:20:48.10:0,48,512	0/1:4,1:5:16.95:17,0,57	0/0:30,0:30:81.20:0,81,887	1/1:1,20:22:47:391,47,0	1/1:1,16:17:47.82:401,48,0	1/1:1,17:18:44.97:391,45,0	1/1:5,9:14:20.99:182,21,0	0/0:7,0:7:15.04:0,15,166	1/1:3,13:16:20.98:262,21,0	1/1:3,14:17:23.98:208,24,0	1/1:0,13:13:35.99:313,36,0	0/0:18,0:18:48.12:0,48,525	1/1:2,22:24:50.66:443,51,0	0/0:8,0:8:21.06:0,21,232
chr10	103420767	.	CCACA	C	3905.44	PASS	AB=0.768;AC=32;AF=0.615;AN=52;BaseQRankSum=4.253;DP=494;FS=18.437;HRun=0;HaplotypeScore=87.7120;InbreedingCoeff=0.6962;MQ=65.27;MQ0=12;MQRankSum=-0.766;QD=14.36;ReadPosRankSum=1.670;VQSLOD=1.9784;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,7:21:27.08:390,27,0	1/1:3,1:4:5.98:68,6,0	./.	0/0:37,0:12:3.01:0,3,72	0/0:7,0:9:7.21:0,7,86	0/1:6,4:12:0.46:132,0,0	1/1:15,9:25:0.15:310,0,0	1/1:13,3:16:5.06:70,5,0	1/1:7,0:12:18.02:168,18,0	0/0:16,0:20:44.04:0,44,642	0/0:12,0:15:17.26:0,17,223	1/1:6,5:12:21.02:287,21,0	1/1:6,4:9:9.03:143,9,0	1/1:11,10:21:30.06:449,30,0	0/0:16,0:22:38.34:0,38,754	0/0:15,0:16:23.75:0,24,453	0/0:26,0:31:38.60:0,39,805	1/1:6,7:13:8.20:386,8,0	./.	1/1:2,0:2:3:27,3,0	1/1:33,8:41:30.43:410,30,0	0/1:17,3:20:23.69:24,0,408	1/1:5,2:7:9.03:143,9,0	1/1:22,9:32:26.57:520,27,0	1/1:9,3:13:12.03:168,12,0	0/0:10,0:10:24.06:0,24,515	1/1:6,4:9:15:211,15,0	0/0:10,0:13:20.54:0,21,336
chr10	103420851	.	A	ACTGGGCTGGGCTGGG	10115.20	PASS	AB=0.963;AC=34;AF=0.630;AN=54;BaseQRankSum=0.684;DP=422;FS=6.345;HRun=0;HaplotypeScore=173.2184;InbreedingCoeff=0.7051;MQ=85.94;MQ0=3;MQRankSum=-8.417;QD=40.46;ReadPosRankSum=-3.463;VQSLOD=3.1677;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,1:19:18.06:732,18,0	1/1:3,3:6:12.04:819,12,0	0/0:25,0:20:23.56:0,24,495	0/1:45,0:39:73.22:73,0,879	0/0:21,0:21:42.13:0,42,1654	1/1:8,3:11:18.06:982,18,0	1/1:28,1:29:24.05:1257,24,0	1/1:9,0:9:3.01:78,3,0	1/1:8,4:13:18.06:1128,18,0	0/0:19,0:19:39.13:0,39,1530	0/0:13,0:13:12.04:0,12,501	1/1:11,0:11:9.03:444,9,0	1/1:6,3:8:15.05:888,15,0	1/1:11,2:13:18.06:1099,18,0	0/0:23,0:23:51.18:0,51,2001	0/1:17,1:18:99:173,0,1497	0/0:27,0:27:57.20:0,57,2342	1/1:8,1:8:12.04:681,12,0	1/1:5,0:5:5.05:89,5,0	./.	1/1:18,0:18:4.50:55,5,0	0/0:15,0:15:27.08:0,27,1027	1/1:9,1:10:9.03:390,9,0	1/1:11,1:12:6.02:423,6,0	1/1:6,1:7:12.04:606,12,0	0/0:20,0:20:42.14:0,42,1642	1/1:4,0:4:6.02:195,6,0	0/0:6,0:6:15.05:0,15,627
chr10	103420937	.	G	GAA	4659.55	PASS	AB=0.673;AC=30;AF=0.536;AN=56;BaseQRankSum=-1.613;DP=497;FS=16.570;HRun=12;HaplotypeScore=77.4503;InbreedingCoeff=0.5738;MQ=74.90;MQ0=1;MQRankSum=-2.413;QD=16.12;ReadPosRankSum=-1.158;VQSLOD=1.7848;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:34:52.96:694,53,0	1/1:1,5:6:15.05:210,15,0	0/0:15,0:16:17.67:0,18,129	0/1:12,1:13:11.40:18,0,11	0/0:27,0:29:50.49:0,50,503	1/1:1,9:11:23.57:303,24,0	0/1:9,12:22:34.12:349,0,34	0/1:6,1:11:11.77:61,0,12	1/1:7,2:10:20.47:203,20,0	0/0:26,0:26:53.96:0,54,483	0/0:12,0:12:29.96:0,30,271	1/1:7,5:14:31.42:330,31,0	1/1:2,12:14:21.07:287,21,0	1/1:8,5:14:27.01:320,27,0	0/0:24,0:27:59.39:0,59,513	0/0:22,0:22:54:0,54,499	0/0:23,0:23:56.96:0,57,511	1/1:2,18:23:42.14:589,42,0	0/1:4,0:16:19.66:68,0,20	1/1:3,2:14:26.93:176,27,0	0/1:9,0:27:11.76:96,0,12	0/0:17,0:19:38.61:0,39,387	1/1:6,11:17:26.89:350,27,0	1/1:1,13:14:33.06:440,33,0	1/1:4,9:14:11.53:135,12,0	0/0:21,0:21:32.87:0,33,305	0/1:5,0:13:30.90:31,0,35	0/0:12,0:12:20.94:0,21,193
chr10	103422590	.	TC	T	4188	PASS	AB=0.991;AC=53;AF=0.946;AN=56;BaseQRankSum=-3.458;DP=522;FS=0.000;HRun=5;HaplotypeScore=54.6575;InbreedingCoeff=0.4065;MQ=55.72;MQ0=82;MQRankSum=2.581;QD=10.32;ReadPosRankSum=3.487;VQSLOD=0.2299;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:2.94:18,3,0	1/1:7,0:7:14.96:123,15,0	0/1:106,1:15:15.81:16,0,70	0/0:115,1:19:21.17:0,21,131	1/1:1,7:8:17.70:113,18,0	1/1:8,0:8:18.36:140,18,0	1/1:8,0:8:17.86:135,18,0	1/1:3,11:14:32.87:260,33,0	1/1:9,0:9:23.89:191,24,0	1/1:1,6:7:17.83:133,18,0	1/1:1,5:5:14.77:94,15,0	1/1:12,0:12:23.81:183,24,0	1/1:9,0:9:12.27:78,12,0	1/1:13,0:13:35.73:274,36,0	1/1:7,0:6:14.99:129,15,0	1/1:2,0:2:2.99:27,3,0	1/1:13,0:12:32.80:250,33,0	1/1:13,0:10:23.70:156,24,0	1/1:4,10:14:29.87:235,30,0	1/1:3,7:8:14.84:100,15,0	1/1:3,0:3:8.93:69,9,0	1/1:1,6:7:11.86:79,12,0	1/1:6,0:6:2.97:23,3,0	1/1:14,0:12:26.19:193,26,0	1/1:8,0:8:14.98:132,15,0	1/1:2,10:11:29.91:242,30,0	1/1:10,0:7:15.38:113,15,0	1/1:60,0:41:85.34:682,85,0
chr10	103422594	.	CCAAAAAAAAAAAAAAAAAAAAAAA	C	3482.23	PASS	AB=0.967;AC=38;AF=0.679;AN=56;BaseQRankSum=-0.452;DP=534;FS=8.153;HRun=0;HaplotypeScore=170.9026;InbreedingCoeff=-0.1331;MQ=48.23;MQ0=102;MQRankSum=4.237;QD=11.23;ReadPosRankSum=3.066;VQSLOD=2.1786;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:18:3.01:177,3,0	1/1:5,0:5:14.97:123,15,0	0/0:105,0:12:12.18:0,12,346	0/0:119,0:18:32.81:0,33,453	0/1:8,0:7:61.24:61,0,339	1/1:7,0:7:9.54:128,10,0	1/1:6,0:7:20.84:157,21,0	0/1:13,0:12:90.98:163,0,91	1/1:8,0:8:22.72:172,23,0	0/1:8,0:8:48.45:48,0,983	0/1:7,0:6:41.43:41,0,688	1/1:11,0:11:7.11:160,7,0	0/1:6,0:6:5.97:45,0,6	1/1:12,0:12:34.56:255,35,0	0/1:7,0:6:99:111,0,277	0/1:3,0:3:17.99:18,0,562	0/1:16,0:15:99:145,0,1259	1/1:13,0:10:10.77:108,11,0	0/1:10,0:10:7.11:185,0,7	1/1:9,0:7:14.84:100,15,0	0/1:3,0:3:17.32:41,0,17	1/1:6,0:6:11.87:79,12,0	0/1:1,0:6:0.18:151,0,0	1/1:14,0:11:26.43:193,26,0	1/1:5,0:5:15:132,15,0	0/1:15,0:14:99:151,0,1337	0/1:11,0:6:7.74:8,0,130	0/1:80,0:46:99:531,0,1700
chr10	103423291	.	TC	T	9073.05	PASS	AB=0.964;AC=35;AF=0.625;AN=56;BaseQRankSum=7.502;DP=478;FS=6.547;HRun=1;HaplotypeScore=54.0060;InbreedingCoeff=0.9189;MQ=78.02;MQ0=1;MQRankSum=1.804;QD=29.27;ReadPosRankSum=2.491;VQSLOD=4.3102;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:31:81.23:1103,81,0	1/1:0,6:6:18.06:251,18,0	0/1:26,1:21:16.48:16,0,290	0/0:15,0:10:14.99:0,15,167	0/0:16,0:16:48.16:0,48,649	1/1:0,12:12:30.10:406,30,0	1/1:0,21:21:48.16:668,48,0	1/1:0,15:15:38.54:490,39,0	1/1:0,14:14:36.12:501,36,0	0/0:19,0:19:57.18:0,57,762	0/0:9,0:9:27.06:0,27,338	1/1:0,20:20:45.15:626,45,0	1/1:1,14:15:33.07:438,33,0	1/1:1,17:18:39.13:531,39,0	0/0:11,0:11:33.10:0,33,442	0/0:13,0:13:39.05:0,39,490	0/0:31,0:31:93.27:0,93,1232	1/1:0,29:29:72.24:1002,72,0	1/1:0,24:24:63.16:796,63,0	1/1:0,12:12:32.95:373,33,0	1/1:0,10:10:27.09:375,27,0	0/0:14,0:14:42.12:0,42,564	1/1:0,9:9:15.05:209,15,0	1/1:1,14:15:33.07:438,33,0	1/1:2,10:12:30.66:440,31,0	0/0:16,0:16:42.09:0,42,566	1/1:1,18:19:26.14:410,26,0	0/0:24,0:24:72.19:0,72,935
chr10	103423987	.	CT	C	380.80	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.745;DP=486;FS=11.780;HRun=1;HaplotypeScore=60.2806;InbreedingCoeff=0.8336;MQ=55.64;MQ0=39;MQRankSum=-2.882;QD=10.58;ReadPosRankSum=-4.038;VQSLOD=-0.6042;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:41.85:0,42,670	0/0:8,0:8:21.51:0,22,306	0/0:54,0:13:27.81:0,28,405	0/0:78,0:9:20.94:0,21,288	0/0:11,0:11:33.11:0,33,527	0/0:16,0:16:32.51:0,33,512	0/0:15,0:15:30.15:0,30,469	1/1:1,10:11:21.38:184,21,0	0/0:11,0:11:24.55:0,25,384	0/0:21,0:21:60.17:0,60,893	0/0:8,0:8:18.06:0,18,273	0/0:16,0:16:39.02:0,39,559	0/0:9,0:9:20.62:0,21,334	0/0:14,0:13:35.97:0,36,570	0/0:12,0:12:30.10:0,30,465	0/0:21,0:21:63.20:0,63,967	0/0:18,0:17:39.08:0,39,585	0/0:10,0:10:30.09:0,30,457	1/1:3,5:8:2.83:127,3,0	1/1:8,2:9:8.49:127,8,0	0/0:6,7:9:2.39:0,2,27	0/0:10,0:10:27:0,27,380	0/0:7,0:7:6.02:0,6,96	0/0:23,0:23:57.16:0,57,909	0/0:11,0:11:21:0,21,332	0/0:24,0:24:69.68:0,70,1032	1/1:6,1:7:12.44:84,12,0	0/0:19,0:14:30.09:0,30,463
chr10	103423989	.	CCT	C	87.23	PASS	AB=0.962;AC=11;AF=0.289;AN=38;BaseQRankSum=0.548;DP=502;FS=3.703;HRun=0;HaplotypeScore=65.6593;InbreedingCoeff=-0.0898;MQ=53.37;MQ0=43;MQRankSum=1.145;QD=0.59;ReadPosRankSum=0.435;VQSLOD=1.4513;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:1.77:0,2,4	0/1:8,0:8:5.28:5,0,29	./.	./.	0/0:11,0:11:23.97:0,24,328	0/0:18,0:18:1.98:0,2,10	0/0:15,0:15:4.73:0,5,25	./.	0/0:13,0:12:0:0,0,0	0/1:22,0:22:14.53:15,0,175	1/1:7,0:7:3.01:32,3,0	0/1:19,0:19:11.77:12,0,40	0/0:10,0:10:1.36:0,1,2	0/0:17,0:16:2.99:0,3,24	0/0:12,0:13:4.61:0,5,125	0/1:22,1:23:9.04:9,0,242	0/1:18,0:16:23.58:24,0,192	0/0:12,0:12:7.32:0,7,48	./.	./.	./.	0/1:7,2:9:54.07:54,0,72	./.	0/0:26,0:26:13.36:0,13,122	./.	0/1:22,0:23:16.52:17,0,120	./.	1/1:18,2:15:2.51:32,3,0
chr10	103424028	.	CTGTCTCTGTCTCTG	C	2880.88	PASS	AB=0.992;AC=17;AF=0.354;AN=48;BaseQRankSum=0.890;DP=369;FS=16.761;HRun=0;HaplotypeScore=132.9373;InbreedingCoeff=0.2559;MQ=52.86;MQ0=15;MQRankSum=1.642;QD=17.57;ReadPosRankSum=-2.314;VQSLOD=1.0368;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:22:22.33:697,22,0	0/1:3,0:3:37.80:38,0,63	0/0:14,0:4:12.04:0,12,259	0/0:36,0:17:40.12:0,40,723	0/0:23,0:23:44.03:0,44,1691	1/1:16,0:15:23.87:309,24,0	1/1:20,0:20:33.29:577,33,0	./.	0/1:13,0:12:29.13:362,0,29	0/0:19,0:19:26.05:0,26,916	0/0:9,0:9:0.33:0,0,341	0/1:17,0:18:11.39:243,0,11	0/1:8,0:8:3.50:76,0,3	0/1:16,0:16:85.20:265,0,85	0/0:13,0:13:30.10:0,30,1134	0/0:20,0:20:47.99:0,48,1773	0/0:24,0:23:59.25:0,59,2350	0/1:7,0:7:12.48:12,0,99	./.	./.	0/0:2,0:1:0.47:0,0,1	0/0:16,0:15:17.12:0,17,919	1/1:1,8:9:0.73:1,1,0	0/1:25,0:25:99:344,0,314	1/1:6,0:6:6.02:111,6,0	0/0:14,0:14:3.37:0,3,922	./.	0/0:9,0:7:10.58:0,11,346
chr10	103424053	.	TCTCCTCCGG	T	1501.95	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.794;DP=441;FS=4.263;HRun=0;HaplotypeScore=136.2340;InbreedingCoeff=0.8396;MQ=70.79;MQ0=6;MQRankSum=-4.383;QD=44.18;ReadPosRankSum=-2.072;VQSLOD=2.7260;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.21:0,60,2323	0/0:5,0:5:12.04:0,12,529	0/0:33,0:22:66.23:0,66,2527	0/0:46,0:31:78.27:0,78,2973	0/0:23,0:23:57.19:0,57,2423	0/0:11,0:11:33.11:0,33,1237	0/0:21,0:21:57.20:0,57,2188	1/1:2,9:10:27.06:691,27,0	0/0:16,0:16:38.91:0,39,1482	0/0:16,0:16:39.13:0,39,1637	0/0:11,0:11:27.98:0,28,1282	0/0:11,0:11:17.34:0,17,840	0/0:6,0:6:18.06:0,18,737	0/0:16,0:16:39.97:0,40,1537	0/0:17,0:17:42.14:0,42,1926	0/0:19,0:19:51.15:0,51,2159	0/0:28,0:28:75.26:0,75,3426	0/0:14,0:14:39.13:0,39,1737	1/1:4,4:6:15.04:341,15,0	1/1:0,6:6:3.01:89,3,0	0/0:8,10:17:0.32:0,0,2	0/0:13,0:12:24.07:0,24,1018	0/0:9,0:9:5.17:0,5,277	0/0:26,0:26:66.18:0,66,2625	0/0:5,0:5:15.05:0,15,626	0/0:17,0:17:45.13:0,45,1793	1/1:2,7:9:18.06:528,18,0	0/0:4,0:3:9.03:0,9,364
chr10	103424976	.	TAA	T	1947.16	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.906;DP=581;FS=5.486;HRun=10;HaplotypeScore=83.4810;InbreedingCoeff=0.9873;MQ=67.62;MQ0=0;MQRankSum=-10.084;QD=20.71;ReadPosRankSum=-1.613;VQSLOD=2.6300;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,1546	0/0:10,0:10:21.07:0,21,333	0/0:15,0:10:17.88:0,18,215	0/0:11,0:8:18.06:0,18,251	0/0:31,0:31:84.28:0,84,1311	0/0:30,0:31:86.72:0,87,1271	0/0:24,0:24:57.19:0,57,902	1/1:7,26:32:75.18:828,75,0	0/0:23,0:23:66.20:0,66,1000	0/0:28,0:28:66.21:0,66,1008	0/0:33,0:33:84.29:0,84,1326	0/0:18,0:18:48.16:0,48,762	0/0:14,0:14:33.11:0,33,524	0/0:18,0:18:48.16:0,48,760	0/0:13,0:13:33.07:0,33,497	0/0:16,0:16:42.11:0,42,640	0/0:39,0:40:99:0,108,1643	0/0:11,0:11:33.11:0,33,520	1/1:4,14:18:42.11:468,42,0	1/1:7,14:21:31.09:364,31,0	1/1:4,3:7:12.03:133,12,0	0/0:15,0:15:30.10:0,30,476	0/0:29,0:29:75.21:0,75,1162	0/0:15,0:15:42.14:0,42,667	0/0:27,0:27:75.26:0,75,1190	0/0:11,0:11:30.10:0,30,475	1/1:5,10:14:28.73:326,29,0	0/0:18,0:18:48.16:0,48,756
chr10	103424990	.	A	AT	2585.56	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.125;DP=574;FS=4.118;HRun=5;HaplotypeScore=80.8444;InbreedingCoeff=0.9620;MQ=59.61;MQ0=2;MQRankSum=-13.514;QD=24.86;ReadPosRankSum=-4.782;VQSLOD=1.1592;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1095	0/0:9,0:9:27.05:0,27,282	0/0:14,0:8:14.50:0,15,129	0/0:10,0:5:11.22:0,11,90	0/0:30,0:30:75.17:0,75,797	0/0:31,0:31:90.20:0,90,954	0/0:28,0:28:75.14:0,75,786	1/1:20,23:41:93.65:1088,94,0	0/0:21,0:21:63.14:0,63,667	0/0:21,0:21:51.13:0,51,548	0/0:29,0:29:81.19:0,81,863	0/0:15,0:15:42.10:0,42,451	0/0:11,0:11:33.08:0,33,354	0/0:20,0:20:57.14:0,57,610	0/0:10,0:10:27.07:0,27,290	0/0:17,0:17:45.11:0,45,483	0/0:38,0:38:99:0,102,1076	0/0:15,0:15:42.11:0,42,451	1/1:3,13:16:38.24:505,38,0	1/1:5,15:20:51.16:631,51,0	1/1:1,5:6:6.02:69,6,0	0/0:13,0:13:33.08:0,33,355	0/0:29,0:29:75.17:0,75,798	0/0:15,0:15:39.10:0,39,419	0/0:27,0:27:72.18:0,72,773	0/0:13,0:13:39.10:0,39,419	1/1:9,8:18:41.87:461,42,0	0/0:19,0:19:45.11:0,45,483
chr10	103424993	.	TTTC	T	1380.38	PASS	AB=0.909;AC=6;AF=0.107;AN=56;BaseQRankSum=9.566;DP=587;FS=21.921;HRun=0;HaplotypeScore=106.8766;InbreedingCoeff=0.1868;MQ=57.58;MQ0=2;MQRankSum=-10.178;QD=12.78;ReadPosRankSum=-4.166;VQSLOD=1.1327;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,2159	0/0:10,0:10:30.10:0,30,561	0/0:15,0:8:20.53:0,21,288	0/0:10,0:4:11.22:0,11,90	0/0:29,0:29:81.27:0,81,1624	0/0:30,0:30:90.30:0,90,1843	0/0:28,0:28:81.24:0,81,1566	0/1:35,10:43:99:782,0,133	0/0:22,0:22:66.19:0,66,1255	0/0:22,0:22:63.20:0,63,1237	0/0:29,0:29:81.26:0,81,1520	0/0:15,0:15:42.13:0,42,755	0/0:12,0:12:36.12:0,36,678	0/0:21,0:21:60.20:0,60,1179	0/0:12,0:12:36.11:0,36,690	0/0:16,0:16:45.14:0,45,891	0/0:40,0:40:99:0,108,2140	0/0:16,0:16:48.10:0,48,893	0/1:17,0:17:96.25:264,0,96	0/1:18,2:20:31:176,0,31	1/1:6,0:6:6.02:74,6,0	0/0:13,0:13:33.10:0,33,624	0/0:29,0:29:87.26:0,87,1671	0/0:14,0:14:39.13:0,39,791	0/0:26,0:26:75.24:0,75,1378	0/0:15,0:15:45.15:0,45,956	0/1:18,2:20:90.11:207,0,90	0/0:19,0:19:45.15:0,45,974
chr10	103425198	.	G	GGA	2081.83	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-0.224;DP=441;FS=1.228;HRun=0;HaplotypeScore=63.7458;InbreedingCoeff=0.9376;MQ=65.72;MQ0=8;MQRankSum=0.027;QD=26.02;ReadPosRankSum=-2.844;VQSLOD=3.5584;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:71.34:0,71,842	0/0:8,0:8:21.07:0,21,285	0/0:21,0:16:30.19:0,30,444	0/0:26,0:13:30.54:0,31,354	0/0:18,0:18:51.11:0,51,629	0/0:17,0:16:31.96:0,32,369	0/0:18,0:18:42.10:0,42,524	1/1:30,0:30:81.10:1180,81,0	0/0:11,0:11:26.20:0,26,326	0/0:16,0:16:35.98:0,36,408	0/0:15,0:15:42.04:0,42,493	0/0:11,0:10:20.96:0,21,229	0/0:11,0:10:21.01:0,21,243	0/0:13,0:13:21.04:0,21,247	0/0:15,0:15:21.88:0,22,263	0/0:14,0:14:39.11:0,39,511	0/0:21,0:21:45.15:0,45,626	0/0:6,0:6:6.05:0,6,31	1/1:1,8:9:23.96:314,24,0	1/1:2,14:16:36:447,36,0	1/1:1,14:15:6.02:108,6,0	0/0:16,0:16:35.69:0,36,367	0/0:9,0:9:24.02:0,24,275	0/0:20,0:20:33.36:0,33,368	0/0:16,0:15:35.42:0,35,400	0/0:19,0:18:48.05:0,48,589	1/1:1,9:9:12.04:199,12,0	0/0:10,0:9:27.07:0,27,336
chr10	103425206	.	G	GGA	1060.86	PASS	AB=0.938;AC=28;AF=0.583;AN=48;BaseQRankSum=-1.438;DP=477;FS=0.000;HRun=0;HaplotypeScore=73.4763;InbreedingCoeff=0.0992;MQ=61.90;MQ0=17;MQRankSum=1.053;QD=3.44;ReadPosRankSum=0.962;VQSLOD=1.5273;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:61.73:96,0,62	./.	./.	./.	0/1:19,0:19:0:0,0,0	1/1:13,3:15:3.48:46,3,0	0/1:19,0:20:19.90:20,0,62	0/0:20,0:28:5.85:0,6,41	0/1:13,0:12:57.96:114,0,58	0/0:12,0:12:5.98:0,6,54	0/0:16,0:18:5.85:0,6,47	0/1:17,1:18:19.49:177,0,19	0/0:12,1:12:2.92:0,3,21	0/1:20,1:20:10.31:66,0,10	0/1:6,13:19:20.99:123,0,21	0/1:16,0:16:13.90:14,0,66	0/0:19,0:24:17.65:0,18,145	1/1:0,6:6:6.02:90,6,0	1/1:6,0:6:4.56:17,5,0	1/1:15,0:14:3.93:12,4,0	1/1:16,0:15:2.44:6,2,0	0/0:10,0:13:5.78:0,6,32	1/1:13,0:13:14.60:109,15,0	1/1:12,13:25:2.11:125,2,0	1/1:14,2:15:3.01:45,3,0	1/1:17,7:23:11.98:114,12,0	1/1:10,0:9:7.02:34,7,0	./.
chr10	103425875	.	TCACATA	T	4833.34	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.936;DP=709;FS=8.706;HRun=0;HaplotypeScore=149.0892;InbreedingCoeff=0.9961;MQ=65.76;MQ0=1;MQRankSum=-7.428;QD=38.06;ReadPosRankSum=-1.303;VQSLOD=4.0813;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:87.24:0,87,2578	0/0:10,0:10:30.04:0,30,684	0/0:36,0:26:63:0,63,1798	0/0:30,0:24:69.03:0,69,1480	0/0:30,0:29:81.15:0,81,2262	0/0:27,0:27:78.20:0,78,2258	0/0:29,0:29:81.25:0,81,2499	1/1:4,25:29:65.97:989,66,0	0/0:19,0:19:48.12:0,48,1449	0/0:19,0:19:57.17:0,57,1628	0/0:16,0:16:48.13:0,48,1402	0/0:30,0:30:78.24:0,78,2538	0/0:28,0:28:84.26:0,84,2675	0/0:33,0:33:99:0,99,3168	0/0:30,0:30:87.19:0,87,2311	0/0:26,0:26:75.20:0,75,2257	0/0:29,0:29:87.14:0,87,2413	0/0:18,0:18:49.13:0,49,1559	1/1:2,19:21:56.94:817,57,0	1/1:1,25:26:48.16:1078,48,0	1/1:1,17:18:15.05:279,15,0	0/0:20,0:20:60.16:0,60,1730	0/0:19,0:19:57.18:0,57,1779	0/0:30,0:30:87.27:0,87,2746	0/0:22,0:22:63.19:0,63,1956	0/0:34,0:34:93.26:0,93,2715	1/1:2,31:33:72:1670,72,0	0/0:12,0:12:36.11:0,36,1095
chr10	103425880	.	TAC	T	530.72	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=12.616;DP=717;FS=16.317;HRun=0;HaplotypeScore=108.2037;InbreedingCoeff=0.6895;MQ=64.75;MQ0=2;MQRankSum=-10.998;QD=4.50;ReadPosRankSum=1.178;VQSLOD=1.5659;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:85.80:0,86,1292	0/0:9,0:9:15.05:0,15,239	0/0:39,0:26:45.11:0,45,680	0/0:34,0:26:39.13:0,39,617	0/0:26,1:26:29.82:0,30,955	0/0:28,0:28:60.20:0,60,962	0/0:30,2:32:11.48:0,11,1154	0/1:25,0:25:13.18:80,0,13	0/0:18,0:18:37.32:0,37,626	0/0:21,0:21:48.16:0,48,773	0/0:16,0:16:39.13:0,39,626	0/0:27,0:27:72.23:0,72,1131	0/0:29,0:29:78.27:0,78,1242	0/0:33,0:33:90.29:0,90,1425	0/0:30,0:30:54.18:0,54,869	0/0:27,0:27:63.17:0,63,983	0/0:29,0:29:69.24:0,69,1107	0/0:18,1:19:6.20:0,6,720	1/1:19,0:19:20.53:92,21,0	1/1:25,0:25:28.81:177,29,0	0/1:17,0:17:13.49:25,0,13	0/0:20,0:20:45.15:0,45,722	0/0:20,0:20:51.16:0,51,793	0/0:32,0:32:83.93:0,84,1289	0/0:23,0:23:56.94:0,57,915	0/0:33,0:33:81.25:0,81,1270	1/1:31,0:31:67.10:310,67,0	0/0:17,0:17:45.15:0,45,696
chr10	103428313	.	GT	G	3743.47	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=6.889;DP=522;FS=9.793;HRun=1;HaplotypeScore=100.8349;InbreedingCoeff=0.5373;MQ=70.98;MQ0=5;MQRankSum=-5.155;QD=20.80;ReadPosRankSum=-2.818;VQSLOD=2.2549;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:17.38:0,17,200	0/1:3,0:3:16.29:16,0,17	0/0:29,0:26:75.14:0,75,925	0/0:25,0:21:60.08:0,60,719	0/0:8,0:8:21.07:0,21,314	0/1:12,0:12:4.03:4,0,55	0/0:27,0:27:2.04:0,2,137	1/1:0,22:22:66.15:792,66,0	0/0:21,0:21:24.28:0,24,149	0/0:17,0:17:48.11:0,48,617	0/0:13,0:13:39.06:0,39,449	0/0:29,0:29:12.14:0,12,185	0/0:13,0:13:5.63:0,6,85	0/1:14,0:14:18.13:18,0,69	0/0:14,0:14:42.09:0,42,553	0/0:17,0:17:51.10:0,51,639	0/0:25,0:25:72.19:0,72,985	0/0:20,0:20:2.20:0,2,126	1/1:0,16:13:36:439,36,0	1/1:2,13:13:24.03:291,24,0	1/1:2,61:61:99:1481,111,0	0/0:11,0:11:30.08:0,30,428	0/0:12,0:12:1.18:0,1,76	0/1:16,0:16:11.36:11,0,77	0/0:7,0:7:18.20:0,18,76	0/0:16,0:16:47.88:0,48,647	1/1:1,18:18:51.17:690,51,0	0/0:9,0:9:24.07:0,24,315
chr10	103428850	.	T	TTACTCGGTCG	5669.22	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-1.528;DP=513;FS=0.602;HRun=0;HaplotypeScore=149.9932;InbreedingCoeff=0.9436;MQ=77.46;MQ0=0;MQRankSum=-9.006;QD=103.08;ReadPosRankSum=-2.158;VQSLOD=4.8447;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,3948	0/0:2,0:2:6.02:0,6,210	0/0:8,0:8:24.08:0,24,780	0/0:16,0:16:41.93:0,42,1190	0/0:20,0:20:57.20:0,57,1948	0/0:14,0:14:42.14:0,42,1352	0/0:26,0:26:78.27:0,78,2687	1/1:6,10:18:54.16:2567,54,0	0/0:18,0:18:54.18:0,54,1702	0/0:22,0:22:60.11:0,60,1907	0/0:10,0:10:27.08:0,27,847	0/0:24,0:24:72.25:0,72,2431	0/0:15,0:15:42.13:0,42,1293	0/0:25,0:25:69.24:0,69,2381	0/0:15,0:15:45.15:0,45,1572	0/0:18,0:18:54.17:0,54,1772	0/0:37,0:37:99:0,105,3565	0/0:35,0:35:99:0,105,3423	1/1:5,1:6:15.01:628,15,0	1/1:4,8:13:30.03:1210,30,0	1/1:2,5:9:6.02:291,6,0	0/0:10,0:10:30.10:0,30,973	0/0:21,0:21:60.10:0,60,1738	0/0:29,0:29:81.26:0,81,2690	0/0:18,0:18:54.10:0,54,1715	0/0:26,0:26:78.24:0,78,2545	1/1:2,5:9:18.06:973,18,0	0/0:7,0:7:21.07:0,21,734
chr10	103429092	.	TTGTG	T	7328.15	PASS	AB=0.802;AC=30;AF=0.536;AN=56;BaseQRankSum=8.205;DP=865;FS=2.298;HRun=0;HaplotypeScore=172.4954;InbreedingCoeff=0.6951;MQ=51.65;MQ0=34;MQRankSum=-1.795;QD=13.70;ReadPosRankSum=0.607;VQSLOD=4.1313;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,11:35:44.88:630,45,0	1/1:7,5:12:12.04:193,12,0	0/0:45,0:14:11.89:0,12,125	0/0:63,0:20:8.98:0,9,88	0/0:14,0:14:17.93:0,18,375	1/1:13,4:17:32.93:452,33,0	1/1:32,7:38:38.96:724,39,0	0/1:44,0:37:54.59:117,0,55	1/1:16,8:22:37.81:496,38,0	0/0:33,0:33:54.39:0,54,1307	0/0:10,0:10:12.03:0,12,221	1/1:22,7:28:39.81:519,40,0	1/1:15,11:25:39.13:598,39,0	1/1:12,15:26:48.11:715,48,0	0/0:37,0:34:51.16:0,51,1100	0/0:14,0:14:19.31:0,19,394	0/0:38,0:43:91.74:0,92,1665	0/1:17,9:24:17.48:540,0,17	1/1:22,0:21:14.82:138,15,0	1/1:4,0:15:17.44:132,17,0	0/1:41,0:101:8.40:64,0,8	0/0:24,0:26:39.02:0,39,746	1/1:11,5:16:31.22:388,31,0	1/1:28,21:48:38.27:766,38,0	1/1:18,8:26:24.19:753,24,0	0/0:36,0:35:52.18:0,52,1402	0/1:12,0:12:16.48:102,0,16	0/0:6,0:7:15.05:0,15,293
chr10	103429120	.	GTGTA	G	3605.93	PASS	AB=0.981;AC=18;AF=0.321;AN=56;BaseQRankSum=11.212;DP=914;FS=11.425;HRun=0;HaplotypeScore=196.7127;InbreedingCoeff=-0.1779;MQ=48.37;MQ0=29;MQRankSum=-2.411;QD=7.66;ReadPosRankSum=6.205;VQSLOD=1.4291;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:29:99:287,0,218	1/1:7,0:7:7:139,7,0	0/0:62,0:13:29.99:0,30,324	0/1:84,0:12:7:7,0,214	0/0:16,0:16:39.83:0,40,622	0/1:20,1:21:88.51:248,0,89	0/1:43,1:43:99:317,0,286	0/0:49,0:41:63.57:0,64,921	0/1:18,0:18:6.13:222,0,6	0/0:40,0:40:99:0,108,1737	0/0:13,0:12:26.94:0,27,348	0/1:22,2:23:99:267,0,99	1/1:21,0:19:1.28:358,1,0	0/1:28,1:28:54.31:411,0,54	0/0:34,0:31:69.35:0,69,1434	0/0:15,0:15:42.03:0,42,649	0/0:40,0:39:99:0,114,2024	0/1:25,1:20:99:277,0,151	0/1:31,0:21:9.58:10,0,187	0/1:17,0:17:11.33:11,0,124	0/0:97,0:93:47.17:0,47,577	0/0:27,0:27:65.77:0,66,1011	0/1:19,0:18:99:155,0,121	0/1:59,0:55:99:369,0,289	0/1:25,1:26:36.93:478,0,37	0/0:43,0:41:80.35:0,80,1897	0/1:12,0:11:49.78:50,0,75	0/0:7,0:7:21:0,21,334
chr10	103429142	.	TTG	T	5886.07	PASS	AB=0.703;AC=13;AF=0.232;AN=56;BaseQRankSum=9.067;DP=1122;FS=15.547;HRun=0;HaplotypeScore=197.4081;InbreedingCoeff=-0.3039;MQ=50.90;MQ0=30;MQRankSum=3.971;QD=11.73;ReadPosRankSum=6.856;VQSLOD=3.1757;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,16:37:99:581,0,121	0/1:5,1:6:35.54:87,0,36	0/1:84,0:12:21.78:22,0,170	0/0:94,1:14:14.75:0,15,150	0/0:25,0:25:60.12:0,60,886	0/1:10,16:27:99:401,0,135	0/1:20,25:42:83.02:829,0,83	0/0:46,0:42:63.41:0,63,919	0/1:14,24:39:43.61:487,0,44	0/0:45,0:45:96.65:0,97,1527	0/0:19,0:16:42.08:0,42,636	0/1:11,19:27:99:565,0,172	0/1:17,10:26:99:295,0,174	0/1:21,14:33:99:571,0,169	0/0:45,0:41:99:0,99,1450	0/0:20,0:20:57.18:0,57,914	0/0:42,0:41:99:0,102,1560	0/1:28,14:35:99:457,0,418	0/0:32,0:29:48.03:0,48,671	0/0:27,0:27:31.27:0,31,672	0/0:110,0:105:99:0,136,2162	0/0:36,0:36:60.03:0,60,1361	0/1:9,11:20:65.10:310,0,65	0/1:32,46:71:99:911,0,178	0/1:13,15:28:55.53:370,0,56	0/0:45,1:44:42.37:0,42,1360	0/0:17,0:17:39.06:0,39,597	0/0:14,0:13:15.48:0,15,425
chr10	103429156	.	GTA	G	2240.57	PASS	AB=0.952;AC=14;AF=0.250;AN=56;BaseQRankSum=14.470;DP=1131;FS=22.595;HRun=0;HaplotypeScore=190.7596;InbreedingCoeff=-0.3354;MQ=51.12;MQ0=61;MQRankSum=0.763;QD=4.34;ReadPosRankSum=6.783;VQSLOD=1.1860;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,2:36:99:242,0,266	0/1:3,2:5:45.72:73,0,46	0/1:63,0:7:21.78:22,0,196	0/0:64,1:8:1.02:0,1,158	0/0:25,0:25:72.18:0,72,1204	0/1:28,1:29:99:152,0,274	0/1:49,1:46:99:325,0,231	0/0:46,0:32:83.94:0,84,1191	0/1:43,2:44:99:201,0,273	0/0:45,0:43:99:0,101,1953	0/0:22,0:19:31.90:0,32,770	0/1:38,1:36:99:215,0,421	0/1:26,2:26:99:125,0,336	0/1:33,1:31:99:240,0,316	0/0:45,0:39:99:0,99,1677	0/0:28,0:27:72.12:0,72,1156	0/0:45,0:42:99:0,108,1828	0/1:42,2:34:99:177,0,621	0/0:35,0:20:56.96:0,57,920	0/0:27,0:27:53.12:0,53,870	0/0:126,0:116:99:0,194,2973	0/0:40,1:41:77.85:0,78,1797	0/1:22,1:22:99:139,0,116	0/1:76,1:68:99:335,0,333	0/1:23,0:23:99:144,0,102	0/0:47,0:42:93.89:0,94,1688	0/0:17,0:17:45.12:0,45,748	0/1:15,0:14:2.33:2,0,526
chr10	103429276	.	T	TTG	3068.77	PASS	AB=0.905;AC=20;AF=0.385;AN=52;BaseQRankSum=-7.586;DP=1192;FS=19.316;HRun=0;HaplotypeScore=200.3760;InbreedingCoeff=-0.6352;MQ=45.70;MQ0=156;MQRankSum=2.770;QD=3.89;ReadPosRankSum=0.599;VQSLOD=1.5767;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,4:21:53.50:54,0,152	0/0:5,0:4:6.02:0,6,75	./.	./.	0/1:31,6:32:99:282,0,353	0/1:17,1:16:99:147,0,146	0/1:40,1:35:96.19:96,0,280	0/0:74,0:40:65.12:0,65,985	0/1:37,5:42:99:150,0,604	0/1:48,3:43:99:182,0,445	0/1:20,2:17:50.31:108,0,50	0/1:37,2:35:38.47:38,0,498	0/1:36,4:33:99:120,0,579	0/1:26,6:30:99:288,0,363	0/1:42,5:61:99:165,0,624	0/1:18,6:34:99:196,0,313	0/1:30,4:29:99:239,0,262	0/1:41,7:40:99:137,0,417	0/0:40,0:12:33.09:0,33,392	0/0:33,0:30:78.20:0,78,929	0/0:130,0:109:99:0,243,2839	0/1:26,3:24:99:127,0,160	0/1:17,3:16:99:121,0,205	0/1:58,10:64:99:313,0,716	0/1:21,1:19:90.52:91,0,179	0/1:38,6:38:99:332,0,342	0/0:28,0:28:78.18:0,78,926	0/1:4,3:12:36.25:36,0,56
chr10	103429425	.	G	GGAGA	8056.17	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=-8.043;DP=832;FS=1.374;HRun=0;HaplotypeScore=139.8230;InbreedingCoeff=0.9163;MQ=57.98;MQ0=19;MQRankSum=1.849;QD=20.45;ReadPosRankSum=-0.645;VQSLOD=4.6645;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,19:38:29.56:609,30,0	1/1:5,0:5:6.02:116,6,0	0/1:67,0:19:6.50:6,0,86	0/0:68,0:32:20.61:0,21,233	0/0:16,0:16:29.90:0,30,469	1/1:11,15:29:20.54:390,21,0	1/1:15,23:45:55.51:1143,56,0	0/0:31,0:27:39.11:0,39,536	1/1:17,5:24:35.59:699,36,0	0/0:32,0:33:63.20:0,63,964	0/0:19,0:22:45.11:0,45,621	1/1:9,17:27:25.49:653,25,0	1/1:6,10:19:32.58:682,33,0	1/1:5,19:28:41.55:908,42,0	0/0:30,0:30:60.12:0,60,928	0/0:27,0:28:51.16:0,51,793	0/0:31,0:31:66.19:0,66,1021	1/1:6,16:24:26.77:584,27,0	0/0:18,0:16:23.59:0,24,359	0/0:16,0:19:42.06:0,42,601	0/0:54,0:56:99:0,105,1610	0/0:25,0:24:42.14:0,42,679	1/1:7,12:21:17.58:370,18,0	1/1:18,14:40:80.95:1601,81,0	1/1:11,10:23:12.04:292,12,0	0/0:26,0:26:62.98:0,63,895	0/0:23,0:25:39.12:0,39,582	0/0:7,0:6:15:0,15,183
chr10	103432636	.	TG	T	1784.20	PASS	AB=0.780;AC=30;AF=0.556;AN=54;BaseQRankSum=2.605;DP=316;FS=8.203;HRun=12;HaplotypeScore=43.0439;InbreedingCoeff=0.2337;MQ=79.96;MQ0=1;MQRankSum=0.877;QD=7.37;ReadPosRankSum=6.765;VQSLOD=0.7293;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,7:24:28.40:185,28,0	0/0:2,0:2:0:0,0,0	0/0:12,1:12:5.83:0,6,35	0/0:13,0:12:9.59:0,10,78	0/0:7,0:8:11.98:0,12,98	1/1:2,6:9:13.99:99,14,0	1/1:5,22:29:65.87:482,66,0	./.	1/1:3,3:6:5.96:46,6,0	0/0:5,0:5:0:0,0,0	0/0:9,0:9:2.97:0,3,30	1/1:6,4:10:11.18:92,11,0	1/1:7,7:14:11.91:93,12,0	1/1:4,5:9:11.95:93,12,0	0/1:11,2:13:7.76:8,0,90	0/0:9,0:9:12.01:0,12,110	0/1:14,3:17:25.51:26,0,96	0/1:7,6:13:48.01:132,0,48	0/1:6,2:8:28.67:55,0,29	1/1:6,4:11:4.98:29,5,0	1/1:12,8:20:20.38:148,20,0	0/1:7,1:8:11.21:11,0,79	1/1:2,3:6:8:52,8,0	1/1:3,10:13:23.90:186,24,0	0/1:5,5:11:13.47:82,0,13	0/0:8,0:8:3.01:0,3,30	0/1:12,6:18:2.49:119,0,2	0/1:2,1:3:14.24:14,0,44
chr10	103432813	.	G	GA	6214.87	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-9.101;DP=440;FS=0.889;HRun=8;HaplotypeScore=59.1309;InbreedingCoeff=0.8830;MQ=89.73;MQ0=5;MQRankSum=-0.030;QD=22.68;ReadPosRankSum=0.799;VQSLOD=5.2927;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:10:24.07:277,24,0	1/1:0,5:5:15.04:173,15,0	0/1:48,0:24:3.09:3,0,174	0/0:55,1:33:25.41:0,25,286	0/0:13,0:13:36.02:0,36,329	1/1:6,13:19:24.07:277,24,0	1/1:1,13:14:36.11:415,36,0	1/1:4,27:31:81.23:926,81,0	1/1:2,4:6:9.63:106,10,0	0/0:8,0:8:21.01:0,21,192	0/0:20,0:20:54.02:0,54,494	1/1:0,8:8:21.06:242,21,0	1/1:1,9:10:29.96:327,30,0	1/1:0,8:8:18.04:208,18,0	0/0:10,0:10:30.02:0,30,274	0/0:5,0:5:15.01:0,15,137	0/0:13,1:14:4.38:0,4,286	1/1:1,15:16:45.13:518,45,0	1/1:6,28:34:81.23:924,81,0	1/1:2,12:14:30.09:346,30,0	1/1:0,4:4:6.02:69,6,0	0/0:8,0:8:23.99:0,24,210	1/1:2,8:10:24.07:277,24,0	1/1:0,2:2:6.02:69,6,0	1/1:1,20:21:57.17:658,57,0	0/0:14,0:14:33:0,33,302	1/1:2,12:14:36.02:398,36,0	0/0:16,0:16:48.03:0,48,439
chr10	103437038	.	GGTTT	G	7385.60	PASS	AB=0.596;AC=22;AF=0.393;AN=56;BaseQRankSum=13.335;DP=642;FS=18.081;HRun=0;HaplotypeScore=105.9354;InbreedingCoeff=0.8529;MQ=68.54;MQ0=1;MQRankSum=1.603;QD=29.42;ReadPosRankSum=5.241;VQSLOD=3.4621;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,25:37:9.13:556,0,9	1/1:3,5:8:12.04:199,12,0	0/0:33,0:28:30.56:0,31,588	0/0:17,0:15:30.10:0,30,636	0/0:19,0:19:42.14:0,42,984	1/1:7,17:24:48.16:796,48,0	1/1:6,16:22:39.09:617,39,0	0/0:24,0:24:30.10:0,30,733	1/1:3,13:16:36.12:597,36,0	0/0:28,0:28:48.16:0,48,1146	0/0:17,0:17:36.12:0,36,881	1/1:0,17:17:48.16:796,48,0	1/1:5,15:19:45.15:745,45,0	1/1:3,15:18:39.13:647,39,0	0/0:33,0:33:87.26:0,87,2010	0/0:26,0:26:69.24:0,69,1697	0/0:19,0:19:51.17:0,51,1245	0/1:8,17:25:35.88:694,0,36	0/0:20,0:20:42.14:0,42,1025	0/0:30,0:30:66.23:0,66,1621	0/0:23,0:23:48.16:0,48,1163	0/0:25,0:25:60.21:0,60,1418	1/1:4,15:19:27.06:447,27,0	1/1:5,19:24:39.13:647,39,0	1/1:6,15:21:39.13:647,39,0	0/0:32,0:32:78.26:0,78,1847	0/0:27,1:28:19.53:0,20,1563	0/0:17,0:17:51.18:0,51,1253
chr10	103438146	.	CAAA	C	1628.58	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=2.942;DP=486;FS=1.843;HRun=14;HaplotypeScore=87.9018;InbreedingCoeff=0.9408;MQ=47.77;MQ0=50;MQRankSum=-6.200;QD=17.14;ReadPosRankSum=-1.911;VQSLOD=2.4147;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:12:15.24:0,15,158	0/0:5,0:6:12.04:0,12,170	0/0:23,0:3:8.53:0,9,56	0/0:17,0:10:9.95:0,10,125	0/0:25,0:24:60.13:0,60,970	0/0:8,0:9:21.07:0,21,306	0/0:18,0:17:30.01:0,30,377	1/1:9,17:26:47.48:534,47,0	0/0:11,0:9:18.06:0,18,263	0/0:28,0:28:72.12:0,72,1195	0/0:24,0:24:51.13:0,51,873	0/0:13,0:14:24.04:0,24,317	0/0:11,0:12:21.07:0,21,300	0/0:14,0:13:27.09:0,27,381	0/0:23,0:22:42.14:0,42,772	0/0:16,0:15:42.14:0,42,723	0/0:18,0:14:33.11:0,33,565	0/0:25,0:20:42.95:0,43,525	1/1:6,7:11:17.98:210,18,0	1/1:5,12:17:35.97:405,36,0	1/1:8,6:7:15.03:164,15,0	0/0:8,0:9:18.04:0,18,279	0/0:13,0:14:30.10:0,30,415	0/0:11,0:11:15.05:0,15,218	0/0:11,0:11:21.07:0,21,296	0/0:26,0:26:63.13:0,63,1022	1/1:8,13:21:44.99:489,45,0	0/0:8,0:7:12:0,12,189
chr10	103438160	.	A	AAT	3866.60	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=3.115;DP=420;FS=10.000;HRun=0;HaplotypeScore=69.3417;InbreedingCoeff=0.8823;MQ=60.90;MQ0=22;MQRankSum=-6.417;QD=16.18;ReadPosRankSum=-0.364;VQSLOD=2.2516;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,9:12:15.12:129,15,0	1/1:1,5:8:14.96:199,15,0	0/0:28,0:6:6.54:0,7,77	0/1:19,0:12:17.99:18,0,154	0/0:22,0:21:55.77:0,56,593	1/1:1,5:7:17.89:253,18,0	1/1:0,12:13:23.97:368,24,0	1/1:23,0:22:51.62:237,52,0	1/1:0,7:7:11.83:164,12,0	0/0:24,0:24:54.08:0,54,662	0/0:19,0:19:50.71:0,51,573	1/1:4,5:8:15.03:221,15,0	1/1:6,2:11:22.32:228,22,0	1/1:3,10:14:27:357,27,0	0/0:22,0:22:54.04:0,54,595	0/0:17,0:16:42.09:0,42,481	0/0:16,0:14:35.67:0,36,379	1/1:8,9:19:21.65:379,22,0	1/1:9,0:8:21.06:113,21,0	1/1:18,0:16:23.46:137,23,0	1/1:10,0:8:18.90:108,19,0	0/0:8,0:8:23.76:0,24,219	1/1:1,10:13:27.02:392,27,0	1/1:6,4:9:14.98:182,15,0	1/1:2,9:13:20.34:266,20,0	0/0:21,0:21:59.31:0,59,622	1/1:18,0:18:21.14:116,21,0	0/0:4,0:4:9.01:0,9,113
chr10	103439604	.	CTG	C	6362.77	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=15.287;DP=1010;FS=24.304;HRun=0;HaplotypeScore=118.6875;InbreedingCoeff=0.9520;MQ=62.17;MQ0=5;MQRankSum=1.884;QD=25.35;ReadPosRankSum=-1.550;VQSLOD=3.4096;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,1:47:86.91:0,87,1842	0/0:12,0:12:24.08:0,24,392	0/0:38,0:23:22.31:0,22,292	0/0:33,0:28:41.82:0,42,465	0/0:28,1:29:38.34:0,38,1128	0/0:25,2:28:7.42:0,7,1116	0/0:51,1:52:99:0,111,2291	1/1:10,24:33:75.13:877,75,0	0/0:38,0:38:96.31:0,96,1537	0/0:39,0:40:77.78:0,78,1611	0/0:20,1:21:20.26:0,20,810	0/0:42,0:42:99:0,105,1674	0/0:29,0:29:66.19:0,66,1027	0/0:31,0:31:75.26:0,75,1217	0/0:36,0:36:90.29:0,90,1447	0/0:37,1:38:62.40:0,62,1496	0/0:33,2:35:59.37:0,59,1441	0/0:38,0:38:59.67:0,60,1456	1/1:5,18:23:51.14:602,51,0	1/1:4,21:25:60.19:736,60,0	1/1:21,109:132:99:3187,222,0	0/0:39,1:41:56.39:0,56,1368	0/0:17,1:18:5.22:0,5,596	0/0:45,1:45:86.50:0,86,1908	0/0:21,1:22:26.28:0,26,907	0/0:29,0:29:35.47:0,35,1065	1/1:5,31:36:78.25:960,78,0	0/0:16,0:16:48.14:0,48,757
chr10	103440711	.	CTT	C	2991.30	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-0.193;DP=540;FS=0.421;HRun=13;HaplotypeScore=72.2025;InbreedingCoeff=0.9346;MQ=65.89;MQ0=12;MQRankSum=3.151;QD=13.66;ReadPosRankSum=6.288;VQSLOD=2.1823;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,27:32:47.16:488,47,0	1/1:1,7:8:18.01:175,18,0	0/0:14,0:7:11.75:0,12,87	0/0:10,0:7:7.26:0,7,74	0/0:21,1:24:36.52:0,37,731	1/1:2,10:11:24.03:233,24,0	1/1:6,12:18:14.85:195,15,0	0/0:18,0:35:55.87:0,56,466	1/1:4,13:17:10.27:242,10,0	0/0:19,0:20:41.87:0,42,509	0/0:17,0:19:38.57:0,39,490	1/1:6,12:18:20.95:252,21,0	1/1:5,10:14:20.77:187,21,0	1/1:5,13:17:27.03:262,27,0	0/0:18,0:17:33.09:0,33,442	0/0:20,0:21:44.51:0,45,511	0/0:34,0:33:78.15:0,78,1045	1/1:1,18:19:30.05:290,30,0	0/0:16,0:25:50.96:0,51,481	0/0:4,0:18:40.56:0,41,363	0/0:6,0:18:29.97:0,30,269	0/0:14,0:14:30.07:0,30,381	1/1:4,19:23:25.87:260,26,0	1/1:3,20:23:48.04:465,48,0	1/1:1,10:12:11.94:166,12,0	0/0:23,0:23:41.60:0,42,520	0/0:8,0:16:33:0,33,363	0/0:8,0:9:0.74:0,1,124
chr10	103441838	.	TACACACAC	T	143.18	PASS	AB=0.870;AC=7;AF=0.135;AN=52;BaseQRankSum=1.157;DP=490;FS=0.000;HRun=0;HaplotypeScore=112.7301;InbreedingCoeff=0.6273;MQ=69.57;MQ0=7;MQRankSum=-1.837;QD=2.31;ReadPosRankSum=1.094;VQSLOD=1.8304;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:40:57.20:0,57,2068	0/0:8,0:9:15.05:0,15,551	./.	./.	0/0:10,0:12:21.06:0,21,549	0/0:18,0:18:27.08:0,27,788	0/0:19,0:19:21.06:0,21,654	0/1:17,3:20:0:0,0,0	0/0:10,0:10:12.04:0,12,382	0/0:15,0:15:25.33:0,25,813	0/0:6,0:6:6.02:0,6,164	0/0:14,0:14:15.05:0,15,588	0/0:16,0:16:27.04:0,27,825	0/0:9,0:9:14.79:0,15,441	0/0:19,0:21:27.09:0,27,949	0/0:15,0:16:36.11:0,36,1020	0/0:29,0:31:45.36:0,45,1194	0/0:18,0:18:27.09:0,27,906	1/1:18,0:18:3:27,3,0	1/1:6,3:9:3.01:75,3,0	0/0:23,6:28:2.04:0,2,6	0/0:8,0:8:9.03:0,9,178	0/0:3,0:3:3.01:0,3,123	0/0:24,0:29:36.12:0,36,1127	0/0:14,0:15:15.05:0,15,487	0/0:16,0:16:21.91:0,22,423	1/1:8,7:14:5.63:149,6,0	0/0:9,0:9:21.07:0,21,687
chr10	103446559	.	AGTGTGT	A	3209.60	PASS	AB=0.776;AC=23;AF=0.426;AN=54;BaseQRankSum=8.765;DP=551;FS=0.564;HRun=0;HaplotypeScore=119.3764;InbreedingCoeff=0.8524;MQ=65.41;MQ0=12;MQRankSum=-9.645;QD=14.02;ReadPosRankSum=2.744;VQSLOD=2.9857;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:32,13:45:5.15:266,0,5	1/1:3,0:3:3.01:62,3,0	./.	0/0:20,0:16:6.02:0,6,191	0/0:13,0:13:27.07:0,27,749	1/1:5,7:13:18.06:350,18,0	1/1:11,10:21:12.04:246,12,0	0/0:24,0:23:18.06:0,18,452	1/1:4,11:16:27.09:534,27,0	0/0:16,0:15:21.96:0,22,561	0/0:8,0:9:14.24:0,14,433	1/1:8,8:16:18.06:350,18,0	1/1:6,13:19:29.95:615,30,0	1/1:9,7:15:12.04:246,12,0	0/0:19,0:20:38.13:0,38,840	0/0:20,0:22:42.14:0,42,1187	0/0:27,0:28:54.66:0,55,1535	1/1:16,9:25:11.09:245,11,0	0/0:15,0:17:27.09:0,27,657	0/0:16,0:17:27.09:0,27,784	0/0:38,0:41:63.20:0,63,1513	0/0:14,0:16:39.13:0,39,1172	1/1:2,6:8:11.87:221,12,0	1/1:18,9:29:8.81:122,9,0	1/1:10,8:18:9.03:161,9,0	0/0:19,0:19:36.11:0,36,958	0/0:19,0:16:21.07:0,21,579	0/0:6,0:7:12.04:0,12,344
chr10	103447923	.	GTCTCTCTCTC	G	2169.90	PASS	AB=0.944;AC=21;AF=0.477;AN=44;BaseQRankSum=5.315;DP=561;FS=6.342;HRun=0;HaplotypeScore=145.1144;InbreedingCoeff=0.5663;MQ=64.58;MQ0=20;MQRankSum=-3.331;QD=10.64;ReadPosRankSum=1.502;VQSLOD=2.0416;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:22:9.03:112,9,0	./.	./.	0/0:53,0:20:0.47:0,0,1	0/0:23,0:23:3.01:0,3,122	1/1:15,0:14:3.01:80,3,0	0/1:16,1:16:69.78:152,0,70	./.	1/1:14,6:19:14.72:338,15,0	0/0:14,0:13:21.07:0,21,731	0/0:22,0:22:3.01:0,3,66	1/1:15,4:21:18.06:492,18,0	1/1:16,0:19:9.03:209,9,0	1/1:13,8:21:21.07:576,21,0	0/0:11,0:10:6.02:0,6,183	0/0:20,0:20:30.10:0,30,1181	0/0:23,0:23:24.08:0,24,762	1/1:11,0:12:6.02:146,6,0	./.	./.	1/1:29,0:26:2.99:23,3,0	0/0:17,0:17:6:0,6,115	./.	0/0:17,5:22:0:0,0,0	1/1:12,0:12:3.01:51,3,0	0/0:23,0:23:19.87:0,20,610	1/1:11,0:14:6.02:140,6,0	0/0:21,0:20:0.89:0,1,2
chr10	103452084	.	G	GTCTCTC	1420.45	PASS	AB=1.000;AC=27;AF=0.563;AN=48;BaseQRankSum=-1.946;DP=623;FS=43.920;HRun=0;HaplotypeScore=141.2264;InbreedingCoeff=0.7017;MQ=73.95;MQ0=19;MQRankSum=-1.614;QD=3.84;ReadPosRankSum=-4.305;VQSLOD=-0.7525;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,3:40:0.89:2,1,0	1/1:6,0:6:3.01:74,3,0	1/1:57,0:27:0.47:1,0,0	./.	0/0:2,0:2:2.37:0,2,8	1/1:24,0:24:15.03:305,15,0	1/1:27,0:26:6.02:81,6,0	1/1:28,0:28:12.58:107,13,0	0/0:30,0:30:30.99:0,31,557	0/0:11,0:13:18:0,18,230	./.	1/1:23,0:23:9:147,9,0	1/1:18,0:18:9.03:166,9,0	1/1:24,0:24:12.04:232,12,0	0/0:16,0:16:7.43:0,7,197	0/0:23,0:23:14.66:0,15,300	0/0:20,0:22:12.88:0,13,248	1/1:18,0:20:13.89:231,14,0	1/1:24,0:24:10.45:63,10,0	0/1:11,0:11:0:0,0,0	1/1:35,0:36:8.90:139,9,0	0/0:5,0:6:9.03:0,9,162	./.	1/1:25,0:30:3.01:39,3,0	./.	0/0:16,0:17:8.12:0,8,143	0/0:15,0:20:11.58:0,12,153	0/0:9,0:7:6.02:0,6,102
chr10	103453285	.	CTA	C	17852.32	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=13.980;DP=692;FS=0.916;HRun=0;HaplotypeScore=102.5244;InbreedingCoeff=0.9986;MQ=87.29;MQ0=1;MQRankSum=-4.273;QD=42.71;ReadPosRankSum=3.326;VQSLOD=6.6822;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,51:51:99:2153,132,0	1/1:0,8:8:17.87:294,18,0	0/0:26,0:26:75.20:0,75,1382	0/0:21,0:21:63.19:0,63,1145	0/0:23,0:23:69.22:0,69,1354	1/1:0,21:21:54.18:881,54,0	1/1:0,25:25:54.18:881,54,0	1/1:0,27:27:81.28:1313,81,0	1/1:0,22:22:51.17:831,51,0	0/0:28,0:27:84.29:0,84,1693	0/0:15,0:15:45.15:0,45,873	1/1:0,29:29:75.26:1224,75,0	1/1:0,17:17:48.16:783,48,0	1/1:0,34:34:93.32:1516,93,0	0/0:27,0:27:81.28:0,81,1645	0/0:33,0:33:99:0,99,2001	0/0:30,0:30:90.28:0,90,1774	1/1:0,20:20:48.16:783,48,0	1/1:0,19:19:54.18:881,54,0	1/1:0,29:28:72.25:1175,72,0	1/1:0,25:25:66.23:1075,66,0	0/0:34,0:34:99:0,102,2060	1/1:0,21:21:54.18:882,54,0	1/1:0,16:16:48.16:783,48,0	1/1:0,20:20:57.19:930,57,0	0/0:28,0:28:84.29:0,84,1679	1/1:0,34:34:90.31:1468,90,0	0/0:9,0:9:27.09:0,27,525
chr10	103454701	.	T	TTAAA	1466.84	PASS	AC=14;AF=0.333;AN=42;BaseQRankSum=-6.209;DP=238;FS=3.665;HRun=0;HaplotypeScore=41.8761;InbreedingCoeff=0.5713;MQ=61.34;MQ0=5;MQRankSum=2.497;QD=19.05;ReadPosRankSum=0.777;VQSLOD=2.9984;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:18.04:0,18,214	./.	./.	./.	./.	0/0:8,0:8:9.02:0,9,100	./.	0/0:28,0:24:2.97:0,3,20	0/0:4,0:4:6.02:0,6,67	1/1:7,0:7:3.01:56,3,0	1/1:9,2:11:6.02:141,6,0	0/0:3,0:3:2.37:0,2,8	0/0:3,0:3:6.01:0,6,64	0/0:3,0:3:3.01:0,3,31	1/1:4,2:6:6.02:141,6,0	1/1:0,3:3:6.02:141,6,0	1/1:9,15:24:39.09:847,39,0	0/0:16,0:16:27.01:0,27,285	0/0:14,0:13:3.01:0,3,46	0/0:4,0:4:6.02:0,6,90	0/0:4,0:4:3.01:0,3,46	./.	./.	0/0:5,0:5:0:0,0,0	0/0:11,0:11:12.04:0,12,148	1/1:12,1:13:3.01:70,3,0	0/0:7,0:7:9.03:0,9,136	1/1:3,5:13:9.03:211,9,0
chr10	103454748	.	TATC	T	2823.19	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=5.093;DP=250;FS=8.076;HRun=0;HaplotypeScore=53.7099;InbreedingCoeff=0.8878;MQ=62.05;MQ0=4;MQRankSum=-4.033;QD=33.61;ReadPosRankSum=2.872;VQSLOD=3.5733;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,10:15:27.83:495,28,0	1/1:1,3:4:12.03:141,12,0	0/0:13,0:10:27.05:0,27,547	0/0:4,0:3:8.51:0,9,109	0/0:8,0:8:21.07:0,21,491	1/1:4,3:7:12.82:283,13,0	1/1:1,3:4:12.02:139,12,0	0/0:26,0:22:62.43:0,62,991	1/1:2,5:7:21.06:271,21,0	0/0:7,0:7:21.07:0,21,480	0/0:5,0:5:15.05:0,15,366	1/1:2,2:4:8.54:99,9,0	1/1:0,2:2:6.02:85,6,0	1/1:0,1:1:3.01:45,3,0	0/0:6,0:6:18.06:0,18,406	0/0:6,0:6:15.05:0,15,369	0/0:22,0:22:60.20:0,60,1400	1/1:13,10:23:52.12:928,52,0	0/0:12,0:11:33.03:0,33,536	0/0:14,0:14:42.13:0,42,718	0/0:5,0:5:15.05:0,15,270	0/0:4,0:4:9.03:0,9,209	1/1:0,2:2:6.01:60,6,0	1/1:1,3:4:8.99:79,9,0	1/1:4,7:11:24.84:413,25,0	0/0:6,0:6:18.06:0,18,433	0/0:12,0:12:33.10:0,33,572	0/0:16,0:16:30.10:0,30,736
chr10	103455542	.	TCA	T	2250.35	PASS	AB=0.965;AC=25;AF=0.446;AN=56;BaseQRankSum=7.341;DP=646;FS=21.785;HRun=0;HaplotypeScore=97.8141;InbreedingCoeff=0.0297;MQ=63.05;MQ0=18;MQRankSum=0.244;QD=5.00;ReadPosRankSum=-3.613;VQSLOD=0.2629;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,21:26:3.01:46,3,0	0/1:14,1:15:34.19:59,0,34	0/1:39,0:13:10.54:11,0,121	0/1:51,0:20:37.15:37,0,52	0/0:23,0:22:17.86:0,18,358	1/1:21,0:21:16.53:311,17,0	0/1:31,0:30:99:277,0,114	0/1:11,21:28:31.91:375,0,32	0/1:11,0:11:12.29:120,0,12	0/0:29,0:29:72.41:0,72,733	0/0:12,0:12:1.89:0,2,189	0/1:22,0:21:55.58:58,0,56	0/1:25,0:25:1.11:1,0,15	0/1:14,0:13:3.65:69,0,4	0/0:39,0:39:45.96:0,46,686	0/0:11,0:11:9.87:0,10,332	0/1:30,0:30:0.42:0,0,676	0/1:18,0:17:30.16:107,0,30	1/1:14,0:14:20.81:260,21,0	1/1:19,0:19:47.77:366,48,0	1/1:10,1:10:3.01:46,3,0	0/0:21,0:21:24.04:0,24,384	0/1:16,0:16:17.44:17,0,22	0/1:28,0:27:51.22:51,0,190	0/0:14,0:14:2.97:0,3,20	0/0:28,0:28:62.34:0,62,745	1/1:3,23:26:6.02:211,6,0	0/0:19,0:19:41.03:0,41,423
chr10	103455544	.	A	ACT	5466.13	PASS	AB=0.787;AC=32;AF=0.571;AN=56;BaseQRankSum=1.831;DP=653;FS=2.695;HRun=0;HaplotypeScore=92.8108;InbreedingCoeff=0.7738;MQ=63.98;MQ0=18;MQRankSum=1.595;QD=14.35;ReadPosRankSum=0.665;VQSLOD=4.7917;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:2.60:0,3,10	1/1:3,12:15:9.01:126,9,0	0/0:39,0:13:23.30:0,23,288	0/1:53,0:21:1.15:1,0,212	0/0:23,0:22:49.64:0,50,600	1/1:21,0:21:45.15:711,45,0	1/1:28,4:31:57.17:884,57,0	1/1:33,0:29:60.20:926,60,0	1/1:11,1:12:26.94:347,27,0	0/0:29,0:29:47.83:0,48,765	0/0:12,0:12:24.08:0,24,309	1/1:6,17:22:7.58:107,8,0	0/1:7,19:27:6.70:11,0,7	1/1:14,0:13:18.01:249,18,0	0/0:37,0:37:78.03:0,78,955	0/0:12,0:12:30.08:0,30,377	0/0:29,0:29:64.55:0,65,881	1/1:17,1:17:39.12:600,39,0	1/1:14,0:14:25.07:401,25,0	1/1:20,0:20:45.62:673,46,0	1/1:3,9:11:2.74:12,3,0	0/0:21,0:21:45.09:0,45,548	1/1:8,9:19:2.03:6,2,0	1/1:12,14:25:17.93:272,18,0	1/1:4,11:15:3.01:49,3,0	0/0:28,0:28:75.23:0,75,974	1/1:26,0:26:6.75:92,7,0	0/0:18,0:18:39.10:0,39,475
chr10	103456447	.	ACCCAGTCATCCCTCCAGTCATTCATCCC	A	6241.40	PASS	AB=0.971;AC=17;AF=0.304;AN=56;BaseQRankSum=4.912;DP=822;FS=4.556;HRun=0;HaplotypeScore=490.8856;InbreedingCoeff=-0.4192;MQ=50.15;MQ0=50;MQRankSum=-8.503;QD=12.48;ReadPosRankSum=-3.060;VQSLOD=1.0869;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:34:99:543,0,1295	0/1:17,0:17:99:476,0,633	0/0:35,0:4:8.90:0,9,76	0/1:27,0:3:0.93:1,0,11	0/0:26,0:24:72.20:0,72,2169	0/1:29,0:28:99:295,0,1397	0/1:31,0:27:99:145,0,520	0/1:47,0:33:99:500,0,153	0/1:25,0:25:99:335,0,1385	0/0:40,0:34:99:0,102,3042	0/0:15,0:14:41.35:0,41,1092	0/1:24,0:24:99:371,0,958	0/1:31,0:30:99:539,0,804	0/1:23,0:22:99:366,0,789	0/0:49,0:49:99:0,147,4838	0/0:28,0:28:84.24:0,84,3187	0/0:36,0:36:99:0,108,3643	0/1:18,0:17:99:309,0,697	0/1:11,12:18:99:365,0,199	0/1:21,0:20:99:192,0,437	0/1:51,0:46:99:115,0,2106	0/0:31,0:26:71.40:0,71,1675	0/0:24,0:22:20.59:0,21,413	0/1:35,0:34:99:498,0,1520	0/1:26,0:24:99:789,0,379	0/0:29,0:29:86.38:0,86,2302	0/1:27,0:27:99:403,0,1110	0/0:9,0:9:27.02:0,27,742
chr10	103457141	.	A	ATC	998.74	PASS	AB=0.931;AC=33;AF=0.688;AN=48;BaseQRankSum=3.768;DP=724;FS=35.317;HRun=0;HaplotypeScore=167.2927;InbreedingCoeff=0.4398;MQ=62.88;MQ0=10;MQRankSum=-3.647;QD=2.06;ReadPosRankSum=-2.017;VQSLOD=1.2083;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:26:6:60,6,0	./.	./.	./.	0/0:25,0:25:3:0,3,32	1/1:41,0:41:2.85:24,3,0	1/1:28,0:26:2.60:11,3,0	1/1:47,0:46:18:173,18,0	1/1:27,0:27:6.01:64,6,0	0/0:27,0:26:2.62:0,3,19	0/1:18,0:18:0:0,0,0	./.	1/1:30,0:30:19.81:159,20,0	1/1:27,0:27:9.39:50,9,0	0/0:28,0:30:14.87:0,15,143	0/0:27,0:30:25.08:0,25,230	0/1:17,5:23:19.32:122,0,19	1/1:11,0:11:9.46:84,9,0	1/1:31,0:29:10.57:97,11,0	1/1:34,0:33:6:51,6,0	1/1:15,0:15:3.01:39,3,0	0/0:28,0:27:6:0,6,64	1/1:25,0:25:2.99:23,3,0	1/1:25,0:24:8.93:68,9,0	1/1:23,0:21:5.98:61,6,0	1/1:25,0:25:0.94:1,1,0	0/1:28,0:25:0.10:54,0,0	0/0:22,0:21:0.76:0,1,28
chr10	103457153	.	C	CTT	4898.23	PASS	AB=0.967;AC=26;AF=0.464;AN=56;BaseQRankSum=10.495;DP=708;FS=10.011;HRun=1;HaplotypeScore=119.1184;InbreedingCoeff=0.2828;MQ=50.77;MQ0=15;MQRankSum=-0.375;QD=10.60;ReadPosRankSum=-0.659;VQSLOD=0.6381;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:31:42.03:270,0,42	1/1:12,0:11:26.98:235,27,0	0/0:16,0:8:19.27:0,19,192	0/0:26,0:13:25.99:0,26,228	0/0:23,0:23:62.80:0,63,522	1/1:37,0:37:46.14:514,46,0	0/1:31,0:29:39.90:318,0,40	0/1:46,0:45:99:500,0,178	0/1:24,0:24:2.07:295,0,2	0/0:28,0:26:71.80:0,72,636	0/0:17,0:17:38.93:0,39,317	1/1:14,0:13:7.99:236,8,0	0/1:32,0:32:99:306,0,121	1/1:26,0:26:43.10:319,43,0	0/0:30,0:29:74.95:0,75,702	0/0:30,0:30:77.91:0,78,773	0/1:25,0:25:10.30:10,0,253	0/1:13,0:12:82.40:82,0,97	0/1:28,0:26:99:301,0,103	1/1:32,0:30:29.54:378,30,0	1/1:15,0:15:4.77:159,5,0	0/0:29,0:28:62.91:0,63,557	1/1:27,0:27:12.67:428,13,0	0/1:11,11:21:23.87:24,0,51	1/1:19,0:17:31.94:287,32,0	0/0:29,0:29:86.82:0,87,748	0/1:26,0:23:31.51:236,0,32	0/0:18,0:17:48.26:0,48,391
chr10	103458230	.	GCTTCTGCTTCTGCTT	G	2901.64	PASS	AB=0.979;AC=17;AF=0.304;AN=56;BaseQRankSum=14.327;DP=618;FS=2.117;HRun=0;HaplotypeScore=247.2988;InbreedingCoeff=-0.3933;MQ=53.18;MQ0=42;MQRankSum=-5.945;QD=8.22;ReadPosRankSum=7.420;VQSLOD=1.7286;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:28:99:244,0,125	0/1:11,0:11:7.25:187,0,7	0/0:16,0:12:36.12:0,36,720	0/0:14,0:8:15.02:0,15,253	0/0:30,0:27:66.18:0,66,1183	0/1:23,0:17:32.03:160,0,32	0/1:25,0:24:91.64:290,0,92	0/1:16,19:34:71.69:325,0,72	0/1:17,0:17:29.68:177,0,30	0/0:28,0:23:62.16:0,62,1120	0/0:20,0:14:32.91:0,33,400	0/1:20,0:18:83.08:176,0,83	0/1:11,0:10:32.47:109,0,32	0/1:23,0:22:56.65:264,0,57	0/0:29,0:25:65.25:0,65,1281	0/0:23,0:20:40.68:0,41,1045	0/0:23,0:19:48.16:0,48,986	0/1:23,0:22:99:267,0,174	0/1:14,0:13:57.06:57,0,68	0/1:9,0:7:6.76:17,0,7	0/1:18,0:17:55.99:83,0,56	0/0:27,0:21:54.06:0,54,949	0/1:14,0:14:99:103,0,152	0/1:32,0:26:99:245,0,162	0/1:19,0:18:99:242,0,104	0/0:24,0:18:54.12:0,54,1060	0/1:26,0:22:58.71:117,0,59	0/0:31,0:29:81.24:0,81,1638
chr10	103458245	.	TCTG	T	3556.69	PASS	AB=0.897;AC=31;AF=0.554;AN=56;BaseQRankSum=9.476;DP=689;FS=6.811;HRun=0;HaplotypeScore=114.9125;InbreedingCoeff=0.7095;MQ=39.11;MQ0=129;MQRankSum=-5.922;QD=8.65;ReadPosRankSum=0.605;VQSLOD=2.8109;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:26:22.88:250,23,0	1/1:11,0:11:27.12:189,27,0	0/0:9,0:5:11.79:0,12,101	0/0:9,0:3:3.01:0,3,48	0/0:35,0:25:29.82:0,30,247	1/1:24,0:15:35.05:243,35,0	1/1:28,0:20:51.33:371,51,0	0/1:40,0:28:23:125,0,23	1/1:15,0:14:32.42:231,32,0	0/0:36,0:23:46.44:0,46,372	0/0:24,0:12:13.31:0,13,140	1/1:22,0:17:31.77:211,32,0	1/1:12,0:10:13.51:127,14,0	1/1:24,0:19:44.65:332,45,0	0/0:32,0:24:34.32:0,34,300	0/0:19,0:14:15.64:0,16,231	0/0:21,0:13:26.69:0,27,183	1/1:25,0:19:18.55:272,19,0	0/1:10,8:11:12.60:129,0,13	1/1:20,0:17:9.20:72,9,0	1/1:19,0:14:2.04:104,2,0	0/0:27,0:13:13.09:0,13,201	1/1:21,0:19:15.13:113,15,0	0/1:39,0:22:15.32:249,0,15	1/1:25,0:21:31.96:257,32,0	0/0:33,0:21:31.29:0,31,371	1/1:29,0:23:34.88:281,35,0	0/0:33,0:27:74.14:0,74,501
chr10	103458251	.	TCTG	T	6453.40	PASS	AC=54;AF=1.000;AN=54;BaseQRankSum=-1.781;DP=715;FS=0.000;HRun=0;HaplotypeScore=99.9270;InbreedingCoeff=-0.0070;MQ=36.71;MQ0=166;MQRankSum=-0.220;QD=9.11;ReadPosRankSum=1.145;VQSLOD=4.1089;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:44,0:28:34.10:276,34,0	1/1:11,0:11:28.25:196,28,0	1/1:8,0:4:6.49:63,6,0	./.	1/1:18,18:23:45.90:271,46,0	1/1:23,0:13:31.51:195,32,0	1/1:31,0:20:54.52:363,55,0	1/1:35,0:22:26.28:158,26,0	1/1:14,0:13:35.77:240,36,0	1/1:19,16:21:34.59:331,35,0	1/1:15,10:13:6.98:43,7,0	1/1:23,0:16:29.15:193,29,0	1/1:12,0:9:21.80:145,22,0	1/1:24,0:18:41.66:310,42,0	1/1:30,0:22:43.98:350,44,0	1/1:20,0:14:30.83:254,31,0	1/1:22,0:11:26.92:215,27,0	1/1:24,0:18:33.34:261,33,0	1/1:20,0:12:26.13:154,26,0	1/1:25,0:17:26.57:104,27,0	1/1:24,0:15:19.86:127,20,0	1/1:29,0:15:29.65:213,30,0	1/1:23,0:18:31.31:164,31,0	1/1:46,0:23:25.28:278,25,0	1/1:27,0:22:44.46:290,44,0	1/1:34,0:20:47.59:350,48,0	1/1:29,0:22:42.07:296,42,0	1/1:34,0:27:74.84:613,75,0
chr10	103458341	.	TCTCCTTCTC	T	70.40	PASS	AB=1.000;AC=12;AF=0.240;AN=50;BaseQRankSum=-2.837;DP=695;FS=0.000;HRun=0;HaplotypeScore=119.2166;InbreedingCoeff=0.2737;MQ=20.59;MQ0=279;MQRankSum=-0.980;QD=0.31;ReadPosRankSum=-2.127;VQSLOD=1.7185;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:17:3.53:0,4,41	0/0:15,0:10:1.91:0,2,48	./.	./.	0/1:26,0:17:1.13:1,0,62	0/0:31,0:18:12.41:0,12,112	0/0:26,0:17:20.20:0,20,157	./.	0/0:30,0:15:3.37:0,3,26	0/0:30,0:20:9.11:0,9,96	0/0:19,0:15:11.34:0,11,136	0/1:28,0:13:4.62:5,0,26	0/0:20,0:13:3.99:0,4,9	0/0:29,0:12:10.32:0,10,64	0/0:29,0:20:23.74:0,24,242	0/0:17,0:12:8.87:0,9,68	0/0:34,0:9:7.47:0,7,42	0/0:12,0:6:10.53:0,11,97	0/1:18,0:6:0:0,0,0	1/1:19,6:10:2.82:15,3,0	1/1:32,0:9:1.41:8,1,0	0/1:29,0:13:6.25:20,0,6	0/1:26,0:19:4.28:4,0,23	0/0:48,0:16:13.12:0,13,82	0/1:22,0:15:0.35:0,0,30	0/0:36,0:16:23.10:0,23,274	1/1:21,0:14:11.95:133,12,0	0/0:27,0:4:6.01:0,6,64
chr10	103458380	.	CCTT	C	107.73	PASS	AB=0.931;AC=8;AF=0.154;AN=52;BaseQRankSum=4.746;DP=581;FS=6.889;HRun=0;HaplotypeScore=103.9867;InbreedingCoeff=-0.2070;MQ=26.76;MQ0=172;MQRankSum=-2.934;QD=0.62;ReadPosRankSum=2.028;VQSLOD=1.2813;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:12:17.43:17,0,84	0/1:6,3:7:23.83:39,0,24	./.	./.	0/0:22,0:15:27.56:0,28,430	0/1:27,0:16:49.70:50,0,179	0/1:33,0:15:52.56:53,0,211	0/0:18,0:2:6.02:0,6,72	0/0:28,3:17:36.05:0,36,443	0/0:29,0:21:55.40:0,55,770	0/0:14,0:11:24.08:0,24,428	0/1:14,2:9:18.36:18,0,74	0/0:16,0:12:27.02:0,27,347	0/1:19,3:14:10.59:11,0,158	0/0:27,0:20:51.17:0,51,854	0/0:15,0:12:24.08:0,24,385	0/0:23,0:10:5.19:0,5,98	0/0:12,0:10:8.45:0,8,189	0/0:10,0:2:3.01:0,3,44	0/0:20,0:9:9.03:0,9,136	0/0:35,0:20:20.94:0,21,316	0/0:25,0:14:32.90:0,33,442	0/1:22,0:17:13:13,0,175	0/0:18,2:11:14.57:0,15,142	0/1:12,1:9:36.22:36,0,98	0/0:41,0:20:54.18:0,54,942	0/0:32,0:25:50.14:0,50,564	0/0:18,0:6:12.04:0,12,203
chr10	103458386	.	CCTT	C	543.26	PASS	AB=0.952;AC=9;AF=0.173;AN=52;BaseQRankSum=2.504;DP=581;FS=31.567;HRun=0;HaplotypeScore=110.2500;InbreedingCoeff=0.0037;MQ=26.89;MQ0=166;MQRankSum=-1.800;QD=3.25;ReadPosRankSum=-1.746;VQSLOD=0.1667;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:12:42.41:122,0,42	1/1:8,1:7:11.99:112,12,0	./.	./.	0/0:21,0:14:29.60:0,30,394	0/1:21,4:15:99:167,0,130	0/1:33,0:14:43.30:43,0,299	0/0:20,0:3:8.24:0,8,96	0/0:34,0:20:26.33:0,26,417	0/0:30,0:22:53.94:0,54,744	0/0:12,0:9:23.81:0,24,364	0/1:13,2:8:36.40:41,0,36	0/0:17,0:13:30.01:0,30,335	0/1:22,0:14:98.48:98,0,178	0/0:29,0:22:53.68:0,54,825	0/0:14,0:11:24.08:0,24,383	0/0:21,0:10:9.19:0,9,96	0/0:13,0:11:10.65:0,11,169	0/0:12,0:2:3.01:0,3,44	0/0:20,0:9:9.03:0,9,134	0/0:33,0:19:17.83:0,18,303	0/0:26,0:14:38.58:0,39,408	0/1:20,2:17:60.47:60,0,136	0/0:19,0:10:15.84:0,16,167	0/1:10,0:8:34.39:39,0,34	0/0:44,0:23:63.17:0,63,1054	0/0:31,0:23:41.92:0,42,514	0/0:18,0:6:12.04:0,12,201
chr10	103458392	.	CCTT	C	718.01	PASS	AB=0.884;AC=10;AF=0.192;AN=52;BaseQRankSum=-0.205;DP=578;FS=39.156;HRun=0;HaplotypeScore=123.4345;InbreedingCoeff=-0.0291;MQ=27.33;MQ0=154;MQRankSum=-2.890;QD=3.64;ReadPosRankSum=-3.618;VQSLOD=-0.4317;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,6:13:67.32:166,0,67	1/1:5,3:7:11.07:135,11,0	./.	./.	0/0:20,0:13:24.04:0,24,366	0/1:21,3:14:99:184,0,124	0/1:30,2:15:64.42:64,0,408	0/0:20,0:4:10.28:0,10,131	0/1:33,1:20:15.89:16,0,415	0/0:30,0:22:55.57:0,56,806	0/0:12,0:9:17.85:0,18,301	0/1:13,2:8:35.24:55,0,35	0/0:19,0:15:17.15:0,17,256	0/1:20,3:15:99:126,0,243	0/0:29,0:23:53.81:0,54,796	0/0:14,0:12:26.82:0,27,339	0/0:21,0:10:8.53:0,9,121	0/0:13,0:11:12.05:0,12,162	0/0:14,0:5:8.98:0,9,107	0/0:19,0:10:11.76:0,12,120	0/0:34,0:19:17.57:0,18,304	0/0:26,0:15:35.59:0,36,418	0/1:17,4:16:70.02:70,0,149	0/0:19,1:11:19.25:0,19,181	0/1:8,2:8:45.73:46,0,47	0/0:43,0:23:63.21:0,63,1066	0/0:30,0:22:41.68:0,42,467	0/0:17,0:7:15.05:0,15,246
chr10	103458448	.	CCCCTCTTT	C	6564.52	PASS	AB=0.963;AC=31;AF=0.554;AN=56;BaseQRankSum=0.948;DP=353;FS=34.010;HRun=0;HaplotypeScore=168.8699;InbreedingCoeff=0.3475;MQ=58.22;MQ0=12;MQRankSum=-3.064;QD=29.31;ReadPosRankSum=1.212;VQSLOD=2.8234;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,6:7:15:354,15,0	1/1:1,2:2:6.02:153,6,0	0/0:42,0:16:35:0,35,505	0/0:29,0:8:16.47:0,16,208	0/0:10,0:10:24.05:0,24,358	1/1:3,10:10:30.04:710,30,0	1/1:5,6:8:20.97:384,21,0	0/0:7,0:7:14.96:0,15,187	1/1:5,14:16:48.07:1179,48,0	0/1:25,0:23:32.81:33,0,654	0/0:6,0:6:12.01:0,12,158	1/1:1,10:11:33.07:876,33,0	1/1:2,6:7:17.55:442,18,0	1/1:1,8:9:27.09:719,27,0	0/0:17,0:17:44.78:0,45,614	0/1:12,0:11:40.68:41,0,252	0/1:11,0:10:27.27:27,0,321	0/1:3,3:5:23.80:264,0,24	0/0:6,0:6:18.06:0,18,295	0/1:7,0:7:1.39:1,0,194	0/1:20,0:16:42.48:42,0,96	0/0:10,0:9:27.06:0,27,402	1/1:2,8:9:24.07:567,24,0	1/1:1,6:6:18.06:502,18,0	1/1:0,3:3:9.03:203,9,0	0/1:18,0:14:25.32:25,0,362	0/1:16,0:14:22.22:22,0,217	0/1:7,0:6:18.44:18,0,164
chr10	103458452	.	T	TC	3029.63	PASS	AB=0.997;AC=36;AF=0.643;AN=56;BaseQRankSum=-7.909;DP=335;FS=43.823;HRun=5;HaplotypeScore=147.0793;InbreedingCoeff=0.3787;MQ=58.92;MQ0=13;MQRankSum=-1.203;QD=12.12;ReadPosRankSum=-1.641;VQSLOD=-0.4860;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:7:19.88:24,0,20	0/1:3,0:2:2.24:26,0,2	0/1:40,1:15:1.55:2,0,181	0/0:30,0:7:13.25:0,13,67	1/1:9,0:9:15.02:150,15,0	0/1:13,0:10:15.02:15,0,52	0/0:9,0:7:7.48:0,7,29	1/1:4,0:4:3:25,3,0	0/0:19,0:16:13.54:0,14,106	1/1:19,5:23:60.22:657,60,0	1/1:6,0:6:12.02:120,12,0	0/0:11,0:11:2.53:0,3,52	0/1:8,0:7:6.75:7,0,21	0/1:9,0:9:6.71:7,0,23	1/1:16,0:16:45.04:440,45,0	1/1:7,4:10:18.04:188,18,0	1/1:11,0:10:16.17:255,16,0	0/0:6,0:5:9.28:0,9,42	1/1:5,1:6:17.93:172,18,0	1/1:6,0:6:15.04:160,15,0	1/1:8,10:15:8.39:69,8,0	1/1:8,1:8:23.88:219,24,0	0/0:10,0:9:6.40:0,6,24	0/1:7,0:6:14.06:18,0,14	0/1:3,0:3:6.10:7,0,6	1/1:12,3:11:30.01:306,30,0	1/1:10,5:13:19.65:182,20,0	1/1:7,0:6:15.04:160,15,0
chr10	103458453	.	CTT	C	4522.94	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=0.108;DP=322;FS=6.098;HRun=7;HaplotypeScore=145.0991;InbreedingCoeff=0.7192;MQ=61.12;MQ0=11;MQRankSum=-5.262;QD=18.24;ReadPosRankSum=4.311;VQSLOD=1.9135;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:7:11.44:77,11,0	1/1:3,0:2:5.99:58,6,0	0/0:40,1:16:22.32:0,22,227	0/0:28,0:7:10.44:0,10,86	1/1:0,6:9:15.04:187,15,0	1/1:13,0:10:22.73:135,23,0	1/1:9,0:7:11.60:94,12,0	./.	1/1:19,0:16:36.44:191,36,0	1/1:5,19:23:57.79:655,58,0	1/1:1,4:5:9.01:112,9,0	1/1:11,0:11:28.32:154,28,0	1/1:8,0:7:14.24:82,14,0	1/1:9,0:9:22.49:119,22,0	1/1:4,12:16:36.11:452,36,0	1/1:2,6:7:18.06:218,18,0	1/1:4,7:10:23.29:269,23,0	1/1:5,0:4:8.34:37,8,0	1/1:3,3:6:11.25:118,11,0	1/1:0,6:6:15.03:187,15,0	1/1:10,4:11:5.10:71,5,0	1/1:2,7:8:20.98:238,21,0	1/1:10,0:9:20.32:175,20,0	1/1:7,0:6:16.99:102,17,0	1/1:3,0:3:8.45:43,8,0	1/1:3,11:11:27.08:335,27,0	1/1:5,9:13:19.30:228,19,0	1/1:0,7:6:15.05:184,15,0
chr10	103458467	.	CCCAT	C	10957.30	PASS	AB=0.947;AC=52;AF=0.929;AN=56;BaseQRankSum=-2.855;DP=335;FS=4.046;HRun=0;HaplotypeScore=140.5870;InbreedingCoeff=0.5181;MQ=61.88;MQ0=10;MQRankSum=-4.371;QD=36.28;ReadPosRankSum=2.266;VQSLOD=5.2106;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:27.04:395,27,0	1/1:4,0:4:12.04:183,12,0	0/0:33,0:11:15.63:0,16,312	0/1:30,3:11:4.75:5,0,109	1/1:8,0:8:24.08:347,24,0	1/1:14,0:12:33.11:560,33,0	1/1:12,0:12:30.10:486,30,0	1/1:1,4:5:3.01:42,3,0	1/1:14,0:13:39.13:741,39,0	1/1:25,0:24:66.11:1018,66,0	1/1:5,0:5:15.05:246,15,0	1/1:12,0:12:30.10:575,30,0	1/1:9,0:8:18.06:326,18,0	1/1:10,0:10:30.10:560,30,0	1/1:13,0:13:39.13:635,39,0	1/1:9,0:8:24.08:379,24,0	1/1:11,0:9:24.08:390,24,0	0/1:7,0:7:1.55:193,0,2	1/1:6,0:6:18.05:260,18,0	1/1:7,0:7:21.07:330,21,0	1/1:12,0:11:21.07:327,21,0	1/1:9,0:8:18.06:298,18,0	1/1:10,0:10:27.09:431,27,0	1/1:10,0:9:27.09:486,27,0	1/1:4,0:4:12.04:227,12,0	1/1:21,0:18:54.18:895,54,0	1/1:11,0:10:19.31:311,19,0	1/1:8,0:7:18.06:310,18,0
chr10	103458468	.	C	CT	4543.83	PASS	AB=0.762;AC=52;AF=0.929;AN=56;BaseQRankSum=-0.393;DP=322;FS=7.603;HRun=0;HaplotypeScore=148.7443;InbreedingCoeff=0.4728;MQ=63.22;MQ0=9;MQRankSum=-3.784;QD=15.56;ReadPosRankSum=3.137;VQSLOD=6.6238;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,9:12:23.75:165,24,0	1/1:0,3:4:5.82:79,6,0	0/0:28,0:11:13.23:0,13,168	0/1:29,0:11:10.13:10,0,73	1/1:1,7:8:20.87:188,21,0	1/1:1,13:12:22.99:187,23,0	1/1:3,11:14:27.91:203,28,0	1/1:4,1:5:0.47:1,0,0	1/1:0,14:13:38.25:243,38,0	1/1:2,20:22:56.21:479,56,0	1/1:1,4:5:15.02:155,15,0	1/1:3,9:12:29.45:183,29,0	1/1:2,7:8:17.26:101,17,0	1/1:0,10:10:29.49:189,29,0	1/1:0,13:13:29.02:247,29,0	1/1:0,8:8:23.85:176,24,0	1/1:1,10:9:23.91:184,24,0	0/1:2,5:7:4.26:74,0,4	1/1:0,5:5:14.92:118,15,0	1/1:1,7:8:21.44:187,21,0	1/1:3,8:11:17.80:125,18,0	1/1:1,6:7:17.96:155,18,0	1/1:1,9:10:26.73:222,27,0	1/1:1,9:9:23.18:147,23,0	1/1:1,3:4:11.88:88,12,0	1/1:5,14:18:46.17:376,46,0	1/1:2,8:10:18.36:138,18,0	1/1:1,7:7:15.87:125,16,0
chr10	103458469	.	CAT	C	4981.25	PASS	AB=0.615;AC=51;AF=0.911;AN=56;BaseQRankSum=-0.959;DP=326;FS=1.275;HRun=0;HaplotypeScore=151.5572;InbreedingCoeff=0.6329;MQ=63.27;MQ0=9;MQRankSum=-4.004;QD=18.80;ReadPosRankSum=1.529;VQSLOD=4.6580;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,9:13:29.78:214,30,0	1/1:0,4:4:11.98:107,12,0	0/0:29,0:11:10.56:0,11,206	0/0:29,0:11:8.33:0,8,84	1/1:1,7:8:23.58:172,24,0	1/1:1,13:12:30.65:215,31,0	1/1:3,11:14:32.08:223,32,0	1/1:4,1:5:2.97:20,3,0	1/1:0,14:13:38.60:264,39,0	1/1:1,20:22:59.42:495,59,0	1/1:1,4:5:14.97:127,15,0	1/1:4,9:13:32.66:223,33,0	1/1:2,7:8:17.56:113,18,0	1/1:0,10:10:29.74:208,30,0	1/1:0,13:13:36.72:272,37,0	1/1:0,8:8:23.90:185,24,0	1/1:1,10:9:23.95:193,24,0	0/1:3,5:8:16.81:96,0,17	1/1:0,5:5:14.90:118,15,0	1/1:2,7:9:26.91:212,27,0	1/1:3,8:11:20.23:139,20,0	1/1:2,6:8:20.97:179,21,0	1/1:1,9:10:26.48:177,26,0	1/1:1,9:9:25.97:169,26,0	1/1:1,3:4:11.93:97,12,0	1/1:5,14:18:53.26:449,53,0	1/1:2,8:10:20.84:161,21,0	1/1:1,7:7:17.99:153,18,0
chr10	103459912	.	T	TTGTGTGTGTG	8281.84	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-4.553;DP=696;FS=15.021;HRun=0;HaplotypeScore=174.8872;InbreedingCoeff=0.8822;MQ=56.21;MQ0=8;MQRankSum=-10.820;QD=19.00;ReadPosRankSum=-3.163;VQSLOD=2.7449;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,15:36:17.89:453,18,0	1/1:7,7:15:3.01:150,3,0	0/0:30,0:20:23.92:0,24,496	0/0:32,0:24:26.98:0,27,518	0/0:19,0:20:38.31:0,38,936	1/1:15,12:33:15.05:501,15,0	1/1:13,21:37:15.05:589,15,0	1/1:31,0:30:23.44:362,23,0	1/1:15,8:25:14.43:593,14,0	0/0:31,0:31:63.12:0,63,1558	0/0:21,0:21:45.15:0,45,1312	1/1:9,10:19:23.87:1118,24,0	1/1:11,9:21:8.69:366,9,0	1/1:12,9:24:14.72:513,15,0	0/0:17,0:17:33.06:0,33,860	0/0:16,0:16:30.09:0,30,785	0/0:37,0:37:75.26:0,75,2127	1/1:16,1:18:18.06:652,18,0	1/1:20,0:17:9.03:119,9,0	1/1:19,0:31:1.42:42,1,0	1/1:20,0:19:20.51:318,21,0	0/0:21,0:21:50.03:0,50,1294	1/1:8,8:19:21.07:601,21,0	1/1:16,14:33:11.39:540,11,0	1/1:8,17:27:36.12:1235,36,0	0/0:28,0:28:57.61:0,58,1481	1/1:15,0:25:3.01:131,3,0	0/0:6,0:6:15.05:0,15,436
chr10	103461927	.	A	AT	21262.30	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-17.773;DP=754;FS=3.156;HRun=0;HaplotypeScore=69.5055;InbreedingCoeff=0.9994;MQ=89.30;MQ0=0;MQRankSum=-2.749;QD=43.93;ReadPosRankSum=4.319;VQSLOD=5.3620;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,58:61:99:2446,154,0	1/1:0,7:7:21.07:336,21,0	0/0:32,0:32:93.21:0,93,1234	0/0:23,0:23:51.21:0,51,817	0/0:21,0:21:60.20:0,60,839	1/1:1,14:15:39.13:623,39,0	1/1:1,35:36:99:1583,99,0	1/1:0,32:32:93.32:1483,93,0	1/1:0,35:35:99:1630,102,0	0/0:30,0:30:87.29:0,87,1217	0/0:20,0:20:57.16:0,57,761	1/1:1,31:32:84.29:1343,84,0	1/1:0,23:23:57.19:909,57,0	1/1:0,34:34:96.33:1535,96,0	0/0:31,0:31:93.31:0,93,1301	0/0:19,0:19:57.18:0,57,780	0/0:27,0:27:78.26:0,78,1091	1/1:0,39:39:99:1774,111,0	1/1:0,17:17:51.17:795,51,0	1/1:0,19:19:54.18:863,54,0	1/1:0,46:46:99:2158,135,0	0/0:17,0:17:51.16:0,51,696	1/1:0,17:17:44.80:716,45,0	1/1:0,25:25:75.26:1199,75,0	1/1:0,19:19:45.15:719,45,0	0/0:36,0:36:99:0,105,1440	1/1:1,26:27:72.24:1151,72,0	0/0:14,0:14:39.13:0,39,545
chr10	103462750	.	C	CG	1059.25	PASS	AB=0.879;AC=12;AF=0.214;AN=56;BaseQRankSum=-2.277;DP=498;FS=0.568;HRun=9;HaplotypeScore=84.9698;InbreedingCoeff=0.7298;MQ=72.56;MQ0=0;MQRankSum=-0.302;QD=9.29;ReadPosRankSum=-2.732;VQSLOD=1.8575;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:33:39.85:0,40,546	0/0:11,0:11:17.99:0,18,156	0/0:9,0:9:5.91:0,6,102	0/0:16,0:16:26.12:0,26,182	0/0:15,0:15:29.98:0,30,259	0/0:20,0:20:59.97:0,60,516	0/0:31,0:31:74.90:0,75,635	1/1:6,13:19:26.93:260,27,0	0/0:16,2:18:14.72:0,15,345	0/0:15,0:16:25.99:0,26,207	0/0:8,0:8:17.90:0,18,141	0/0:17,0:18:28.92:0,29,222	0/0:13,0:13:29.86:0,30,249	0/0:19,2:21:8.80:0,9,303	0/0:31,0:31:65.94:0,66,572	0/0:8,0:8:20.03:0,20,162	0/0:37,0:37:95.87:0,96,817	0/0:31,0:31:57.83:0,58,577	1/1:7,10:17:29.94:302,30,0	1/1:2,2:4:6.02:66,6,0	1/1:17,10:27:36.66:384,37,0	0/0:9,0:9:14.92:0,15,111	0/1:5,1:6:4.79:5,0,89	0/1:24,3:27:28.51:29,0,455	0/0:9,0:9:23.86:0,24,196	0/0:17,0:17:7.69:0,8,235	1/1:6,8:14:18.02:187,18,0	0/0:11,0:11:17.98:0,18,156
chr10	103466196	.	CA	C	614.48	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.630;DP=667;FS=0.863;HRun=1;HaplotypeScore=114.4616;InbreedingCoeff=0.9992;MQ=83.11;MQ0=0;MQRankSum=-2.221;QD=27.93;ReadPosRankSum=1.497;VQSLOD=3.5591;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,2151	0/0:13,0:13:39.09:0,39,570	0/0:23,0:23:51.93:0,52,769	0/0:21,0:21:53.54:0,54,714	0/0:20,0:20:60.16:0,60,872	0/0:30,0:30:90.30:0,90,1404	0/0:32,0:32:96.27:0,96,1475	0/0:27,0:27:78.25:0,78,1203	1/1:0,22:22:51.17:709,51,0	0/0:22,0:22:66.22:0,66,1044	0/0:17,0:17:48.09:0,48,697	0/0:27,0:27:81.15:0,81,1194	0/0:32,0:32:93.32:0,93,1475	0/0:34,0:34:99:0,102,1567	0/0:21,0:21:63.16:0,63,913	0/0:23,0:23:66.20:0,66,1001	0/0:29,0:29:84.25:0,84,1293	0/0:35,0:35:99:0,102,1524	0/0:21,0:21:63.20:0,63,969	0/0:10,0:10:30.10:0,30,479	0/0:44,0:44:99:0,129,1917	0/0:22,0:22:66.21:0,66,1027	0/0:12,0:12:36.08:0,36,498	0/0:19,0:19:57.19:0,57,900	0/0:17,0:17:48.14:0,48,742	0/0:16,0:16:48.16:0,48,765	0/0:20,0:17:60.14:0,60,876	0/0:13,0:13:39.13:0,39,617
chr10	103466782	.	AGT	A	419.85	PASS	AB=0.931;AC=16;AF=0.296;AN=54;BaseQRankSum=5.267;DP=688;FS=4.753;HRun=0;HaplotypeScore=90.3879;InbreedingCoeff=-0.1354;MQ=57.11;MQ0=20;MQRankSum=3.760;QD=1.28;ReadPosRankSum=0.937;VQSLOD=1.4776;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,5:46:0.05:0,0,386	0/1:9,0:9:44.45:44,0,90	./.	0/0:37,0:11:1.25:0,1,3	0/1:23,0:23:1.17:1,0,365	1/1:11,0:21:17.04:84,17,0	1/1:20,0:29:11.36:55,11,0	0/0:35,0:35:26.97:0,27,278	0/1:16,0:18:26.01:26,0,160	0/1:21,3:25:27.55:28,0,381	0/0:11,0:10:9.02:0,9,114	0/0:22,0:22:29.98:0,30,365	0/1:24,0:24:8.99:9,0,377	0/1:13,2:14:8.98:9,0,266	0/1:22,0:22:17.06:17,0,451	0/0:23,0:23:36.06:0,36,462	0/1:45,3:46:51.04:51,0,468	0/0:24,5:29:0.43:0,0,330	0/0:17,0:15:9.85:0,10,87	0/0:9,0:15:11.74:0,12,88	0/0:34,0:33:5.15:0,5,65	0/0:21,0:20:3.14:0,3,367	0/1:17,3:20:95.90:96,0,293	0/1:30,3:33:61.53:62,0,556	0/1:13,1:14:21.02:21,0,101	0/1:20,4:23:68.50:68,0,219	0/0:9,0:19:18.06:0,18,154	0/0:10,0:9:21:0,21,287
chr10	103468008	.	TC	T	2355.61	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.964;DP=537;FS=12.470;HRun=7;HaplotypeScore=59.4881;InbreedingCoeff=0.9898;MQ=82.72;MQ0=0;MQRankSum=-1.269;QD=23.09;ReadPosRankSum=-0.007;VQSLOD=2.5975;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.25:0,81,1011	0/0:12,0:12:24.08:0,24,302	0/0:25,0:24:47.02:0,47,681	0/0:9,0:9:23.96:0,24,260	0/0:10,0:10:24.06:0,24,288	0/0:17,0:17:48.14:0,48,588	0/0:26,0:26:66.21:0,66,830	1/1:1,19:20:57.13:581,57,0	0/0:15,0:15:42.13:0,42,528	0/0:14,0:14:33.09:0,33,393	0/0:10,0:10:24.08:0,24,301	0/0:30,0:30:75.23:0,75,929	0/0:22,0:22:57.17:0,57,705	0/0:28,0:28:63.20:0,63,792	0/0:20,0:21:60.01:0,60,709	0/0:20,0:20:60.18:0,60,741	0/0:27,0:27:72.22:0,72,894	0/0:23,0:23:66.21:0,66,829	1/1:1,11:12:30.03:297,30,0	1/1:1,6:7:11.84:122,12,0	1/1:5,35:40:96.21:979,96,0	0/0:16,0:16:42.13:0,42,528	0/0:11,0:11:30.10:0,30,377	0/0:22,0:22:66.21:0,66,830	0/0:14,0:14:36.10:0,36,440	0/0:22,0:22:51.16:0,51,642	1/1:1,22:23:54.12:550,54,0	0/0:10,0:10:24.08:0,24,302
chr10	103472495	.	C	CATTATTATT	5251.42	PASS	AB=1.000;AC=31;AF=0.674;AN=46;BaseQRankSum=3.164;DP=354;FS=7.112;HRun=0;HaplotypeScore=118.8299;InbreedingCoeff=0.5846;MQ=80.92;MQ0=0;MQRankSum=-6.670;QD=24.31;ReadPosRankSum=-5.875;VQSLOD=1.4286;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:9,2:15:15.05:516,15,0	1/1:4,1:5:6.02:209,6,0	./.	./.	0/1:18,0:18:17.63:18,0,312	1/1:4,2:6:9.03:348,9,0	./.	1/1:45,0:44:66.15:1477,66,0	1/1:7,1:8:3.01:135,3,0	0/0:8,0:10:2.49:0,2,5	0/0:9,0:14:4.98:0,5,10	1/1:8,0:9:3.01:117,3,0	1/1:7,1:8:3.01:135,3,0	1/1:13,1:14:9.03:359,9,0	0/0:14,0:14:12.03:0,12,270	0/0:6,0:8:15.05:0,15,390	0/0:24,0:26:41.62:0,42,1068	1/1:18,6:25:12.04:485,12,0	1/1:15,0:15:10.28:287,10,0	1/1:9,0:9:6.49:149,6,0	1/1:7,0:7:3.01:97,3,0	./.	./.	1/1:3,0:3:3.01:76,3,0	1/1:12,0:14:15.05:482,15,0	0/0:11,0:11:6.02:0,6,135	1/1:15,0:15:12.04:361,12,0	0/0:13,0:14:15.05:0,15,368
chr10	103474620	.	G	GGTGT	2584.76	PASS	AB=0.928;AC=35;AF=0.673;AN=52;BaseQRankSum=4.727;DP=572;FS=4.993;HRun=0;HaplotypeScore=137.9041;InbreedingCoeff=0.5735;MQ=64.88;MQ0=15;MQRankSum=-3.241;QD=6.29;ReadPosRankSum=-2.861;VQSLOD=1.9110;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:42:19.35:417,19,0	1/1:10,0:10:6.02:116,6,0	./.	./.	0/0:21,0:21:12.04:0,12,186	1/1:22,0:23:22.89:420,23,0	1/1:17,1:22:5.98:122,6,0	1/1:31,0:30:6.96:73,7,0	1/1:11,0:13:2.76:52,3,0	0/1:22,0:22:25.52:26,0,125	0/0:13,0:12:5.60:0,6,93	1/1:5,1:13:8.77:135,9,0	1/1:10,4:15:6.02:141,6,0	1/1:9,1:13:10.80:157,11,0	0/0:14,0:14:15.04:0,15,210	0/0:12,0:15:17.72:0,18,253	0/1:36,0:35:13.41:13,0,522	1/1:13,0:15:13.21:150,13,0	1/1:20,0:20:15.05:258,15,0	1/1:19,0:20:5.81:101,6,0	1/1:29,0:28:8.92:88,9,0	0/0:18,0:18:24.07:0,24,334	1/1:8,2:10:5.49:24,5,0	1/1:22,9:35:17.53:307,18,0	0/1:13,1:17:0:1,0,0	0/0:25,0:25:12.40:0,12,209	1/1:12,0:13:9.97:158,10,0	0/0:1,0:1:3.01:0,3,47
chr10	103475200	.	CA	C	10999.05	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=11.922;DP=666;FS=3.342;HRun=1;HaplotypeScore=68.3321;InbreedingCoeff=0.9999;MQ=96.80;MQ0=0;MQRankSum=-9.187;QD=36.91;ReadPosRankSum=5.250;VQSLOD=5.2304;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,49:49:99:1788,129,0	1/1:0,13:13:36.12:503,36,0	0/0:30,0:30:87.27:0,87,1315	0/0:33,0:33:86.41:0,86,1244	0/0:16,0:16:45.14:0,45,692	1/1:0,17:17:48.16:670,48,0	1/1:0,28:28:75.25:1043,75,0	0/0:23,0:23:69.21:0,69,1040	1/1:0,21:21:57.19:796,57,0	0/0:15,0:15:39.13:0,39,603	0/0:16,0:16:45.09:0,45,625	1/1:0,21:21:60.20:837,60,0	1/1:0,22:22:54.18:754,54,0	1/1:0,18:18:51.17:712,51,0	0/0:23,0:23:69.22:0,69,1078	0/0:18,0:18:54.18:0,54,863	0/0:29,0:29:87.30:0,87,1391	1/1:0,24:24:60.20:838,60,0	0/0:21,0:21:63.19:0,63,958	0/0:19,0:19:51.17:0,51,813	0/0:48,0:48:99:0,144,2226	0/0:18,0:18:45.15:0,45,717	1/1:0,17:17:39.09:545,39,0	1/1:0,49:49:99:1802,129,0	1/1:0,19:19:51.17:713,51,0	0/0:22,0:22:54.17:0,54,819	0/0:24,0:24:72.25:0,72,1151	0/0:13,0:13:39.13:0,39,623
chr10	103475722	.	CTGTGTGTGTGTGTGTGTG	C	1089.84	PASS	AB=0.769;AC=15;AF=0.326;AN=46;BaseQRankSum=4.703;DP=419;FS=25.901;HRun=0;HaplotypeScore=200.5958;InbreedingCoeff=0.5432;MQ=70.36;MQ0=13;MQRankSum=-3.504;QD=11.01;ReadPosRankSum=-0.418;VQSLOD=1.1317;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:27,0:20:3.01:0,3,39	0/0:16,0:16:15.05:0,15,1086	1/1:8,5:13:3.01:145,3,0	1/1:17,0:16:0.89:2,1,0	0/0:17,0:16:6.47:0,6,112	1/1:12,2:15:9.03:256,9,0	0/0:6,0:6:3.90:0,4,174	0/1:7,0:10:0.70:1,0,191	./.	1/1:6,4:9:12.04:533,12,0	1/1:12,1:13:6.02:211,6,0	0/0:16,0:16:18.06:0,18,1317	0/0:11,0:14:6.49:0,6,368	0/0:27,0:27:42.14:0,42,2426	0/0:17,0:17:3.48:0,3,160	0/0:10,0:10:11.52:0,12,156	0/0:6,0:7:15.05:0,15,352	0/0:33,0:30:27.09:0,27,798	0/0:13,0:12:3.01:0,3,249	1/1:5,1:7:3.01:55,3,0	1/1:14,0:14:3:25,3,0	./.	0/0:15,0:15:24.08:0,24,1194	0/0:7,0:6:6.02:0,6,117	0/0:6,0:6:3.01:0,3,253
chr10	103475866	.	C	CT	4874.51	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-3.043;DP=508;FS=6.365;HRun=10;HaplotypeScore=77.9535;InbreedingCoeff=0.9293;MQ=71.53;MQ0=1;MQRankSum=-0.369;QD=22.06;ReadPosRankSum=1.606;VQSLOD=5.7724;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,25:33:41.52:638,42,0	1/1:2,5:7:9.02:96,9,0	0/0:20,0:15:16.58:0,17,115	0/0:13,0:10:7.46:0,7,65	0/0:18,0:19:49.98:0,50,400	1/1:0,13:13:33.08:352,33,0	1/1:5,16:21:14.44:330,14,0	0/0:13,0:13:16.81:0,17,56	1/1:3,8:11:24.06:254,24,0	0/0:23,0:23:58.96:0,59,474	0/0:20,0:20:53.91:0,54,441	1/1:2,16:18:44.91:450,45,0	1/1:2,10:12:30.08:320,30,0	1/1:4,13:19:26.87:436,27,0	0/0:21,0:21:52.74:0,53,423	0/0:13,0:14:36.82:0,37,281	0/0:30,0:31:79.91:0,80,642	1/1:2,23:25:38.88:616,39,0	0/0:20,0:19:24.85:0,25,98	0/0:24,0:24:25.05:0,25,64	0/0:9,0:9:5.60:0,6,13	0/0:9,0:9:23.96:0,24,196	1/1:4,9:13:2.42:231,2,0	1/1:2,24:27:62.78:653,63,0	1/1:1,20:21:48.08:499,48,0	0/0:18,0:20:55.01:0,55,430	0/0:14,0:14:14:0,14,36	0/0:15,0:15:38.93:0,39,318
chr10	103475876	.	TC	T	2000.60	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=3.339;DP=500;FS=11.401;HRun=2;HaplotypeScore=85.1437;InbreedingCoeff=0.8804;MQ=67.23;MQ0=3;MQRankSum=-0.253;QD=21.28;ReadPosRankSum=-0.675;VQSLOD=2.2847;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:73.94:0,74,585	0/0:6,0:6:11.96:0,12,93	0/1:19,0:11:8.83:9,0,111	0/0:13,0:10:13.37:0,13,128	0/0:20,0:20:52.97:0,53,700	0/0:16,0:16:38.83:0,39,298	0/0:18,0:18:44.77:0,45,346	1/1:1,11:12:35.82:373,36,0	0/0:11,0:11:32.68:0,33,236	0/0:21,0:20:50.55:0,51,768	0/0:20,0:20:57.16:0,57,741	0/0:20,0:19:47.79:0,48,374	0/0:10,0:10:29.89:0,30,228	0/0:18,0:18:46.57:0,47,349	0/0:21,0:21:27.89:0,28,727	0/0:16,0:16:44.48:0,44,543	0/0:34,0:34:83.89:0,84,1117	0/0:27,0:27:74.74:0,75,589	1/1:1,15:15:45:488,45,0	1/1:1,24:25:57.18:730,57,0	1/1:0,7:7:12.04:153,12,0	0/0:11,0:11:33.05:0,33,374	0/0:13,0:13:32.91:0,33,283	0/0:27,0:27:71.67:0,72,541	0/0:19,0:19:50.80:0,51,388	0/0:20,0:20:54.38:0,54,667	1/1:0,15:15:33.11:424,33,0	0/0:14,0:14:42.12:0,42,551
chr10	103476125	.	G	GC	4459.05	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.036;DP=517;FS=0.393;HRun=4;HaplotypeScore=64.0484;InbreedingCoeff=0.9903;MQ=73.28;MQ0=0;MQRankSum=-1.511;QD=36.85;ReadPosRankSum=-2.522;VQSLOD=4.1102;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:48.12:0,48,533	0/0:5,0:5:15.04:0,15,170	0/0:7,0:7:18.02:0,18,183	0/0:12,0:12:24.05:0,24,255	0/0:13,0:13:30.08:0,30,340	0/0:24,0:24:63.18:0,63,711	0/0:28,0:28:81.20:0,81,898	1/1:1,39:40:99:1562,117,0	0/0:25,0:25:72.21:0,72,816	0/0:20,0:20:48.13:0,48,538	0/0:7,0:7:18.05:0,18,201	0/0:22,0:22:66.17:0,66,738	0/0:25,0:25:63.18:0,63,713	0/0:26,0:26:69.20:0,69,783	0/0:21,0:21:63.14:0,63,700	0/0:22,0:22:57.16:0,57,646	0/0:18,0:18:51.15:0,51,579	0/0:22,0:22:63.18:0,63,714	1/1:1,17:18:48.12:616,48,0	1/1:0,10:10:30.10:399,30,0	1/1:2,23:25:63.21:861,63,0	0/0:10,0:10:24.05:0,24,263	0/0:8,0:8:24.07:0,24,272	0/0:24,0:24:63.14:0,63,700	0/0:14,0:14:42.12:0,42,475	0/0:14,0:14:24.06:0,24,272	1/1:2,26:27:75.25:1021,75,0	0/0:10,0:10:30.09:0,30,340
chr10	103477096	.	TC	T	2303.52	PASS	AB=0.800;AC=11;AF=0.196;AN=56;BaseQRankSum=6.479;DP=432;FS=6.024;HRun=6;HaplotypeScore=44.5877;InbreedingCoeff=0.8308;MQ=64.93;MQ0=1;MQRankSum=0.054;QD=19.20;ReadPosRankSum=0.362;VQSLOD=2.7847;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:39.58:0,40,494	0/0:8,0:8:20.99:0,21,237	0/0:7,0:7:12.04:0,12,153	0/1:3,1:4:5.20:5,0,70	0/0:7,0:7:15.04:0,15,183	0/0:12,0:12:30.08:0,30,379	0/0:27,0:27:75.23:0,75,962	1/1:9,5:14:9.89:91,10,0	0/0:7,0:7:21.07:0,21,276	0/0:13,0:13:36.08:0,36,418	0/0:8,0:8:18.03:0,18,195	0/0:18,0:18:54.17:0,54,697	0/0:18,0:18:48.15:0,48,615	0/0:29,0:29:84.26:0,84,1086	0/0:16,0:16:42.14:0,42,551	0/0:10,0:10:30.09:0,30,383	0/0:34,0:34:93.29:0,93,1204	0/0:19,0:19:51.16:0,51,666	1/1:4,16:20:48.55:490,49,0	1/1:0,4:4:2.74:32,3,0	1/1:8,56:63:99:1432,120,0	0/0:8,0:8:24.06:0,24,301	0/0:9,0:9:27.04:0,27,289	0/0:16,0:16:45.15:0,45,592	0/0:14,0:14:33.09:0,33,405	0/0:9,0:9:27.08:0,27,340	1/1:0,14:14:38.99:419,39,0	0/0:4,0:4:9.03:0,9,118
chr10	103477540	.	GTA	G	2833.24	PASS	AB=0.889;AC=23;AF=0.500;AN=46;BaseQRankSum=7.570;DP=289;FS=4.354;HRun=0;HaplotypeScore=53.4806;InbreedingCoeff=0.8114;MQ=78.29;MQ0=1;MQRankSum=0.443;QD=21.79;ReadPosRankSum=-0.285;VQSLOD=3.3198;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,12:19:36.09:428,36,0	1/1:2,4:6:9.03:104,9,0	./.	0/0:21,0:12:6.88:0,7,63	0/0:18,0:18:33.11:0,33,535	1/1:10,7:17:42.08:468,42,0	1/1:3,2:5:9.03:105,9,0	0/0:14,0:13:11.70:0,12,121	1/1:2,4:6:15.05:186,15,0	0/0:12,0:12:18.06:0,18,296	0/0:8,0:8:15.05:0,15,251	1/1:4,3:7:15.03:170,15,0	1/1:3,5:8:21.07:257,21,0	1/1:7,5:12:24.04:260,24,0	0/0:15,0:15:36.11:0,36,571	0/1:7,1:8:23.16:23,0,157	0/0:21,0:21:51.15:0,51,784	1/1:6,15:21:42.13:518,42,0	0/0:8,0:8:6.02:0,6,76	./.	./.	./.	1/1:3,4:7:12.04:141,12,0	./.	1/1:2,11:13:30.09:361,30,0	0/0:17,0:17:42.14:0,42,697	0/0:4,0:4:3:0,3,25	0/0:10,0:10:24.08:0,24,397
chr10	103477554	.	GTA	G	2767.14	PASS	AC=22;AF=0.458;AN=48;BaseQRankSum=8.066;DP=258;FS=4.434;HRun=0;HaplotypeScore=52.2428;InbreedingCoeff=0.8551;MQ=74.82;MQ0=1;MQRankSum=-0.223;QD=24.49;ReadPosRankSum=1.103;VQSLOD=3.9476;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,10:18:39.09:450,39,0	1/1:4,1:5:6.02:74,6,0	./.	0/0:19,0:11:5.23:0,5,47	0/0:15,0:15:36.11:0,36,562	1/1:4,12:16:21.06:247,21,0	1/1:1,2:3:6.02:67,6,0	0/0:16,0:15:16.39:0,16,151	1/1:2,4:6:15.05:183,15,0	0/0:8,0:8:18.06:0,18,298	0/0:10,0:10:30.10:0,30,467	1/1:4,3:7:18.04:207,18,0	1/1:2,5:7:18.06:217,18,0	1/1:3,5:8:24.07:285,24,0	0/0:12,0:12:30.10:0,30,496	0/0:5,0:5:11.78:0,12,154	0/0:19,0:19:39.13:0,39,639	1/1:8,15:23:50.51:689,51,0	0/0:2,0:2:6.02:0,6,77	./.	0/0:1,0:1:0.47:0,0,1	./.	1/1:0,6:6:11.85:140,12,0	./.	1/1:4,9:13:33.10:400,33,0	0/0:17,0:17:42.14:0,42,694	0/0:2,0:2:3:0,3,26	0/0:10,0:10:27.08:0,27,419
chr10	103478458	.	CT	C	5081.90	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=19.420;DP=623;FS=0.646;HRun=2;HaplotypeScore=218.8213;InbreedingCoeff=0.9804;MQ=77.12;MQ0=0;MQRankSum=-18.961;QD=14.95;ReadPosRankSum=3.324;VQSLOD=4.7214;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:35:78.46:559,78,0	1/1:1,9:10:26.54:180,27,0	0/0:22,0:22:54.88:0,55,778	0/0:25,0:25:65.68:0,66,865	0/0:18,0:18:54.16:0,54,769	1/1:2,12:15:31.14:246,31,0	1/1:5,16:23:41.38:324,41,0	1/1:10,18:30:46.05:389,46,0	1/1:3,26:30:69.35:502,69,0	0/0:29,0:29:87.29:0,87,1303	0/0:19,0:19:57.19:0,57,854	1/1:2,25:32:65.34:487,65,0	1/1:1,9:11:18.67:183,19,0	1/1:3,11:14:32.65:223,33,0	0/0:31,0:31:90.30:0,90,1349	0/0:24,1:25:50.25:0,50,1012	0/0:25,0:25:72.20:0,72,1054	1/1:2,5:8:5.62:84,6,0	1/1:5,16:23:30.50:323,30,0	1/1:4,22:26:65.42:458,65,0	1/1:2,10:14:22.05:164,22,0	0/0:30,0:30:87.28:0,87,1284	1/1:3,14:21:50.22:341,50,0	1/1:2,10:18:18.38:135,18,0	1/1:4,12:16:38.73:282,39,0	0/0:30,0:30:90.30:0,90,1349	1/1:3,10:14:20.69:202,21,0	0/0:29,0:29:84.28:0,84,1259
chr10	103478461	.	ATGG	A	9282.78	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=19.932;DP=560;FS=0.000;HRun=0;HaplotypeScore=210.6336;InbreedingCoeff=0.9967;MQ=78.60;MQ0=0;MQRankSum=-19.766;QD=33.39;ReadPosRankSum=3.123;VQSLOD=5.1949;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:81.09:992,81,0	1/1:0,9:9:26.82:316,27,0	0/0:20,0:20:57.17:0,57,1314	0/0:24,0:24:69.24:0,69,1573	0/0:18,0:18:54.19:0,54,1329	1/1:1,12:13:38.49:464,38,0	1/1:1,16:17:49.40:607,49,0	1/1:1,18:19:52.48:699,52,0	1/1:2,26:28:83.38:964,83,0	0/0:32,0:32:93.32:0,93,2227	0/0:21,0:21:63.22:0,63,1525	1/1:2,25:27:78.21:929,78,0	1/1:1,9:10:24.85:334,25,0	1/1:1,11:12:33.10:410,33,0	0/0:30,0:30:90.31:0,90,2221	0/0:24,1:25:36.40:0,36,1711	0/0:24,0:24:72.25:0,72,1768	1/1:1,5:6:14.68:178,15,0	1/1:2,16:18:38.71:601,39,0	1/1:0,22:22:66.21:832,66,0	1/1:2,10:12:25.21:265,25,0	0/0:29,0:29:87.30:0,87,2145	1/1:3,14:17:50.74:588,51,0	1/1:6,10:16:28.56:257,29,0	1/1:0,12:12:36.12:459,36,0	0/0:31,0:31:93.31:0,93,2182	1/1:1,10:11:31.65:387,32,0	0/0:28,0:28:84.29:0,84,2071
chr10	103478466	.	CT	C	2888.20	PASS	AB=0.583;AC=33;AF=0.589;AN=56;BaseQRankSum=20.134;DP=585;FS=0.641;HRun=1;HaplotypeScore=217.4605;InbreedingCoeff=0.9355;MQ=80.69;MQ0=0;MQRankSum=-18.880;QD=9.72;ReadPosRankSum=3.392;VQSLOD=1.5729;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:32:78.36:329,78,0	1/1:1,9:10:27.37:126,27,0	0/0:23,0:23:66.18:0,66,973	0/0:20,0:20:59.85:0,60,844	0/0:20,0:20:60.18:0,60,913	1/1:2,12:14:35.52:170,36,0	1/1:3,16:19:47.41:208,47,0	1/1:1,18:19:35.61:268,36,0	1/1:3,26:29:69.10:297,69,0	0/0:33,0:33:99:0,99,1584	0/0:20,0:20:60.20:0,60,959	1/1:3,25:28:65.80:282,66,0	1/1:2,9:11:22.19:97,22,0	1/1:0,11:11:29.49:123,29,0	0/0:31,0:31:93.30:0,93,1458	0/0:27,1:28:72.50:0,72,1262	0/0:25,0:25:75.26:0,75,1194	0/1:2,5:7:4.72:44,0,5	1/1:4,16:20:23.12:276,23,0	1/1:2,22:24:61.95:266,62,0	1/1:4,10:14:11.24:70,11,0	0/0:31,0:31:93.30:0,93,1464	1/1:3,14:17:44.01:174,44,0	1/1:8,10:18:22.19:105,22,0	1/1:0,12:12:32.54:139,33,0	0/0:27,0:27:81.28:0,81,1296	1/1:2,10:12:14.49:141,14,0	0/0:30,0:30:90.31:0,90,1439
chr10	103478469	.	A	AT	9760.77	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=19.853;DP=637;FS=3.886;HRun=1;HaplotypeScore=208.0291;InbreedingCoeff=0.9994;MQ=80.40;MQ0=0;MQRankSum=-19.129;QD=28.37;ReadPosRankSum=1.141;VQSLOD=4.5070;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,27:36:99:982,101,0	1/1:1,9:10:27.05:280,27,0	0/0:26,0:26:75.17:0,75,871	0/0:20,0:20:57.15:0,57,711	0/0:19,0:19:54.18:0,54,701	1/1:3,12:15:42.07:415,42,0	1/1:8,16:24:69.15:759,69,0	1/1:10,18:28:84.23:989,84,0	1/1:5,30:35:92.64:934,93,0	0/0:33,0:33:99:0,99,1274	0/0:20,0:20:57.16:0,57,712	1/1:5,25:30:86.57:833,87,0	1/1:2,11:13:33.02:344,33,0	1/1:3,11:14:42.08:424,42,0	0/0:30,0:30:90.28:0,90,1153	0/0:27,1:28:54.89:0,55,1021	0/0:25,0:25:75.24:0,75,973	1/1:4,5:9:27:276,27,0	1/1:2,19:21:63.19:775,63,0	1/1:3,25:28:81.11:812,81,0	1/1:3,13:16:31.16:280,31,0	0/0:31,0:31:93.30:0,93,1207	1/1:3,15:18:48.09:489,48,0	1/1:2,13:15:25.58:306,26,0	1/1:5,12:17:42.09:438,42,0	0/0:28,0:28:81.26:0,81,1052	1/1:4,11:14:39.04:425,39,0	0/0:33,0:33:99:0,99,1241
chr10	103479995	.	TACCC	T	15037.67	PASS	AB=0.545;AC=23;AF=0.411;AN=56;BaseQRankSum=13.266;DP=762;FS=12.460;HRun=0;HaplotypeScore=139.0865;InbreedingCoeff=0.9262;MQ=80.25;MQ0=0;MQRankSum=-7.564;QD=45.99;ReadPosRankSum=4.726;VQSLOD=5.1392;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,42:43:99:1976,102,0	1/1:0,20:20:51.15:916,51,0	0/0:27,0:27:78.19:0,78,1917	0/0:34,0:34:98.54:0,99,2562	0/0:26,0:26:72.25:0,72,1847	1/1:2,31:33:81.28:1514,81,0	1/1:0,20:20:42.14:792,42,0	0/0:22,0:21:57.19:0,57,1444	1/1:1,28:29:75.18:1424,75,0	0/0:35,0:35:99:0,102,1723	0/0:15,0:15:42.14:0,42,780	1/1:0,22:22:57.20:1104,57,0	1/1:0,26:26:72.25:1373,72,0	1/1:1,23:24:54.19:1046,54,0	0/0:30,0:30:90.30:0,90,2395	0/0:33,0:33:99:0,99,2691	0/0:30,0:30:87.30:0,87,2341	1/1:4,20:24:69.24:1324,69,0	0/0:27,0:27:78.26:0,78,1946	0/0:22,0:22:51.17:0,51,1302	0/0:32,0:32:87.30:0,87,2261	0/0:24,0:24:72.25:0,72,1894	1/1:1,32:33:81.28:1509,81,0	0/1:5,25:30:83.79:982,0,84	1/1:2,21:23:57.19:1078,57,0	0/0:20,0:20:57.10:0,57,1334	0/0:39,0:39:99:0,114,2996	0/0:19,0:19:54.19:0,54,1472
chr10	103480098	.	A	AAACCAACT	24438.65	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-5.170;DP=856;FS=2.388;HRun=0;HaplotypeScore=222.0703;InbreedingCoeff=0.9737;MQ=71.06;MQ0=0;MQRankSum=-13.350;QD=46.73;ReadPosRankSum=-1.712;VQSLOD=4.5632;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,7:38:51.17:1447,51,0	1/1:5,6:11:21.06:772,21,0	0/0:27,0:25:35.04:0,35,524	0/0:41,0:41:4.91:0,5,1119	0/0:20,0:20:42.14:0,42,927	1/1:13,11:25:15.05:624,15,0	1/1:30,11:41:90.18:2796,90,0	1/1:38,0:31:60.20:1578,60,0	1/1:11,12:29:27.09:1123,27,0	0/0:35,0:35:60.19:0,60,1469	0/0:21,0:21:42.14:0,42,1024	1/1:4,26:38:48.10:1900,48,0	1/1:21,9:31:69.19:2328,69,0	1/1:15,9:24:51.15:1779,51,0	0/0:35,0:35:87.28:0,87,2084	0/0:38,0:38:93.31:0,93,2198	0/0:51,0:51:99:0,123,2784	1/1:24,6:30:12.43:1074,12,0	1/1:13,12:29:54.14:1802,54,0	1/1:11,9:26:24.03:811,24,0	1/1:31,5:36:51.03:1452,51,0	0/0:30,0:30:54.15:0,54,1196	1/1:8,16:29:24.88:808,25,0	1/1:34,6:40:66.16:1661,66,0	1/1:16,6:21:27.09:983,27,0	0/0:22,0:22:40.33:0,40,898	1/1:9,15:35:36.12:1501,36,0	0/0:12,0:12:27.09:0,27,697
chr10	103480389	.	CAACCACCAACA	C	7586.18	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.814;DP=846;FS=6.242;HRun=0;HaplotypeScore=270.4434;InbreedingCoeff=0.9998;MQ=68.41;MQ0=1;MQRankSum=-8.309;QD=50.24;ReadPosRankSum=-1.671;VQSLOD=3.7140;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,7014	0/0:10,0:10:30.09:0,30,1342	0/0:21,0:21:57.20:0,57,2203	0/0:34,0:34:93.85:0,94,4247	0/0:18,0:18:48.14:0,48,2142	0/0:30,0:30:86.11:0,86,4591	0/0:24,0:25:66.06:0,66,3122	1/1:9,33:42:98.93:2090,99,0	0/0:31,0:31:90.31:0,90,4369	0/0:41,0:41:99:0,114,5826	0/0:15,0:15:45.14:0,45,1823	0/0:36,0:36:99:0,105,5206	0/0:28,0:28:81.28:0,81,4273	0/0:44,0:44:99:0,129,6340	0/0:29,0:29:84.27:0,84,4298	0/0:40,0:40:99:0,114,5830	0/0:31,0:31:90.31:0,90,4543	0/0:38,0:38:59.48:0,59,5398	1/1:4,17:21:51.04:992,51,0	1/1:2,23:25:51.02:1483,51,0	1/1:17,14:31:37.89:1464,38,0	0/0:25,0:25:63.19:0,63,3056	0/0:26,0:26:66.23:0,66,3512	0/0:43,0:42:99:0,114,6021	0/0:32,0:32:87.07:0,87,3777	0/0:34,0:33:93.32:0,93,4795	1/1:4,28:32:45.15:1558,45,0	0/0:16,0:16:42.12:0,42,2098
chr10	103483519	.	CTCCT	C	6392.59	PASS	AB=0.649;AC=28;AF=0.538;AN=52;BaseQRankSum=10.290;DP=677;FS=28.049;HRun=0;HaplotypeScore=127.9450;InbreedingCoeff=0.7307;MQ=56.90;MQ0=6;MQRankSum=-0.508;QD=16.18;ReadPosRankSum=3.881;VQSLOD=2.9358;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,22:47:31.03:776,31,0	1/1:2,4:7:9.02:122,9,0	./.	./.	0/0:19,0:19:33.10:0,33,712	1/1:15,6:21:15.04:224,15,0	0/1:17,13:30:21.74:217,0,22	0/0:12,0:12:2.04:0,2,6	1/1:12,19:30:42.14:658,42,0	0/0:29,0:29:36.12:0,36,787	0/0:6,0:13:25.12:0,25,336	1/1:10,15:25:36.12:565,36,0	1/1:6,21:27:29.62:470,30,0	1/1:9,23:32:48.16:751,48,0	0/0:28,0:28:63.21:0,63,1374	0/0:36,0:36:72.25:0,72,1625	0/0:42,0:42:82.72:0,83,1999	1/1:11,17:27:33.11:517,33,0	0/1:11,0:33:81.82:82,0,109	1/1:2,0:23:5.99:54,6,0	0/0:14,0:14:3:0,3,26	0/0:17,0:17:42.14:0,42,975	1/1:4,10:14:21.24:330,21,0	1/1:8,26:34:66.22:1035,66,0	1/1:6,16:22:36.12:564,36,0	0/0:31,0:31:60.21:0,60,1383	1/1:3,0:21:2.79:28,3,0	0/0:7,0:7:9.03:0,9,213
chr10	103483538	.	CT	C	1311.76	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=8.715;DP=684;FS=0.000;HRun=2;HaplotypeScore=114.2171;InbreedingCoeff=0.7581;MQ=58.83;MQ0=8;MQRankSum=-0.677;QD=12.86;ReadPosRankSum=-3.304;VQSLOD=1.3906;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:71.83:0,72,771	0/0:8,0:8:13.14:0,13,174	0/0:16,0:6:15.05:0,15,213	0/0:23,2:10:12.55:0,13,205	0/0:25,0:25:75.24:0,75,1071	0/0:19,0:19:39.01:0,39,475	0/0:23,0:23:34.49:0,34,383	1/1:2,15:17:18.63:462,19,0	0/0:29,1:30:35.23:0,35,321	0/0:24,0:24:44.64:0,45,974	0/0:19,0:19:51.12:0,51,649	0/0:25,0:25:37.71:0,38,392	0/0:22,0:22:11.87:0,12,61	0/0:34,0:34:41.52:0,42,414	0/0:30,0:30:90.28:0,90,1292	0/0:29,0:29:87.29:0,87,1270	0/0:47,0:47:99:0,141,1977	0/0:28,0:27:35.43:0,35,340	1/1:25,1:25:9.40:532,9,0	0/1:23,0:23:42.11:140,0,42	1/1:6,12:18:9.92:314,10,0	0/0:21,0:21:63.20:0,63,914	0/0:18,0:18:27.95:0,28,295	0/0:32,0:32:34.54:0,35,257	0/0:21,0:21:25.66:0,26,218	0/0:31,0:31:90.30:0,90,1311	1/1:18,0:18:2.37:8,2,0	0/0:11,0:10:30.10:0,30,429
chr10	103484947	.	TTG	T	121.03	PASS	AB=0.909;AC=7;AF=0.140;AN=50;BaseQRankSum=1.500;DP=488;FS=0.000;HRun=0;HaplotypeScore=80.7641;InbreedingCoeff=-0.0540;MQ=54.62;MQ0=12;MQRankSum=0.388;QD=1.18;ReadPosRankSum=1.647;VQSLOD=1.2475;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:5.98:0,6,46	0/0:7,0:7:6.01:0,6,60	./.	./.	0/0:18,0:17:5.99:0,6,52	0/0:13,0:13:2.99:0,3,24	1/1:11,3:15:8.82:66,9,0	0/0:19,0:19:1.25:0,1,3	0/0:12,0:10:6:0,6,67	0/1:19,0:17:19.89:25,0,20	0/0:10,0:10:3.01:0,3,44	0/0:16,0:16:5.98:0,6,64	0/1:9,1:15:19.93:20,0,60	0/0:14,0:23:6.44:0,6,47	0/0:14,2:16:9.03:0,9,132	0/1:13,3:16:29.87:81,0,30	0/1:18,2:17:22.40:22,0,79	0/0:17,0:16:8.24:0,8,95	0/0:17,0:17:2.97:0,3,20	0/0:21,0:21:8.80:0,9,71	0/0:28,0:26:15.01:0,15,159	0/0:14,0:14:3.01:0,3,44	0/0:8,0:7:3.01:0,3,44	0/0:35,0:33:5.76:0,6,88	0/1:14,3:18:20.05:26,0,20	0/0:23,0:23:4.25:0,4,29	./.	0/0:8,0:6:3.01:0,3,42
chr10	103489478	.	T	TC	3818.30	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-0.938;DP=666;FS=1.241;HRun=7;HaplotypeScore=81.3681;InbreedingCoeff=0.9953;MQ=77.25;MQ0=0;MQRankSum=-3.378;QD=27.67;ReadPosRankSum=-4.054;VQSLOD=2.4134;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,1029	0/0:8,0:8:20.44:0,20,202	0/0:16,0:16:36.05:0,36,343	0/0:20,0:20:22.77:0,23,437	0/0:23,0:23:60.05:0,60,570	0/0:35,0:36:98.19:0,98,933	0/0:18,0:18:42.06:0,42,406	1/1:5,11:15:39.11:462,39,0	0/0:30,0:30:90.12:0,90,859	0/0:29,0:29:87.12:0,87,833	0/0:16,0:16:45.07:0,45,434	0/0:18,0:18:48.08:0,48,463	0/0:25,0:25:69.09:0,69,660	0/0:24,0:24:69.11:0,69,666	0/0:32,0:32:90.12:0,90,860	0/0:18,0:18:54.08:0,54,516	0/0:27,0:27:72.11:0,72,695	0/0:13,0:13:36.06:0,36,348	1/1:5,23:28:43.23:791,43,0	1/1:4,15:19:16.16:466,16,0	1/1:13,25:39:81.22:942,81,0	0/0:17,0:17:44.92:0,45,406	0/0:19,0:19:48.03:0,48,454	0/0:30,0:30:87.04:0,87,816	0/0:18,0:18:51.07:0,51,488	0/0:28,0:28:84.14:0,84,811	1/1:6,30:36:99:1156,99,0	0/0:24,0:24:72.12:0,72,695
chr10	103489519	.	TA	T	3733.77	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.645;DP=664;FS=2.283;HRun=3;HaplotypeScore=84.5119;InbreedingCoeff=0.9990;MQ=85.24;MQ0=0;MQRankSum=-5.305;QD=30.36;ReadPosRankSum=-2.281;VQSLOD=2.5325;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.27:0,93,1292	0/0:8,0:8:21.07:0,21,298	0/0:23,0:23:63.16:0,63,831	0/0:22,0:22:64.70:0,65,826	0/0:17,0:17:48.11:0,48,666	0/0:29,0:29:87.24:0,87,1195	0/0:22,0:22:63.19:0,63,887	1/1:1,26:27:78.22:941,78,0	0/0:25,0:25:75.23:0,75,1045	0/0:35,0:35:99:0,105,1404	0/0:19,0:19:54.17:0,54,760	0/0:25,0:25:75.23:0,75,1047	0/0:28,0:28:84.25:0,84,1158	0/0:29,0:29:87.22:0,87,1210	0/0:29,0:29:84.23:0,84,1124	0/0:25,0:25:75.25:0,75,1078	0/0:26,0:26:78.22:0,78,1097	0/0:15,0:15:45.14:0,45,628	1/1:3,11:14:42.10:485,42,0	1/1:0,27:27:66.17:799,66,0	1/1:2,17:19:42.10:490,42,0	0/0:22,0:22:60.16:0,60,837	0/0:20,0:20:51.14:0,51,690	0/0:25,0:25:75.23:0,75,1045	0/0:21,0:21:51.15:0,51,691	0/0:29,0:29:87.28:0,87,1222	1/1:1,35:36:84.20:1018,84,0	0/0:15,0:15:45.15:0,45,645
chr10	103494031	.	A	ATT	11582.51	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-12.197;DP=634;FS=0.000;HRun=9;HaplotypeScore=70.2116;InbreedingCoeff=0.9779;MQ=79.25;MQ0=1;MQRankSum=-1.679;QD=32.81;ReadPosRankSum=2.543;VQSLOD=4.9892;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,27:35:69.23:1043,69,0	1/1:0,6:6:18.06:277,18,0	0/0:11,0:11:24.06:0,24,255	0/0:18,0:18:33.40:0,33,334	0/0:27,0:28:59.82:0,60,618	1/1:2,19:26:65.18:906,65,0	1/1:2,22:26:50.66:738,51,0	1/1:3,20:24:63.16:904,63,0	1/1:3,14:17:42.14:629,42,0	0/0:26,0:27:62.84:0,63,649	0/0:28,0:28:72.15:0,72,766	1/1:2,14:17:4.19:476,4,0	1/1:2,15:17:38.96:594,39,0	1/1:4,12:17:32.60:470,33,0	0/0:35,0:37:87.04:0,87,1036	0/0:29,0:29:72.14:0,72,766	0/0:39,0:39:99:0,108,1139	1/1:1,18:19:54.18:831,54,0	1/1:7,13:21:39.13:579,39,0	1/1:2,13:17:41.55:550,42,0	1/1:6,19:27:53.67:794,54,0	0/0:24,0:24:66.16:0,66,702	1/1:5,13:20:41.07:545,41,0	1/1:1,19:24:65.69:926,66,0	1/1:4,14:19:44.12:618,44,0	0/0:20,0:22:47.81:0,48,546	1/1:1,17:20:47.65:701,48,0	0/0:16,0:17:35.52:0,36,333
chr10	103496021	.	G	GTTTA	2927.21	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=3.304;DP=528;FS=2.199;HRun=0;HaplotypeScore=102.1195;InbreedingCoeff=0.7059;MQ=65.22;MQ0=0;MQRankSum=0.059;QD=22.69;ReadPosRankSum=-4.153;VQSLOD=2.4391;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:29.23:0,29,733	0/1:12,0:12:31.88:32,0,99	0/0:18,0:14:29.39:0,29,432	0/0:11,0:8:16.60:0,17,246	0/0:29,0:29:74.81:0,75,1309	0/0:10,0:10:23.96:0,24,241	0/0:13,0:13:21.06:0,21,231	1/1:18,13:32:38.69:748,39,0	0/1:6,0:6:5.96:6,0,134	0/0:27,0:27:75.25:0,75,1326	0/0:21,0:21:60.19:0,60,1057	0/0:12,0:12:21.93:0,22,227	0/0:10,0:10:27.07:0,27,287	0/1:14,0:14:10.89:11,0,314	0/0:19,0:19:51.09:0,51,749	0/0:16,0:16:45.14:0,45,789	0/0:37,0:37:99:0,108,1855	0/0:36,0:36:83.52:0,84,857	1/1:5,19:25:54.74:930,55,0	1/1:10,4:14:27.23:405,27,0	1/1:4,3:7:18.02:337,18,0	0/0:13,0:13:36.04:0,36,556	0/0:14,0:14:17.84:0,18,214	0/0:7,0:7:9.02:0,9,115	0/0:28,0:28:39.06:0,39,591	0/0:35,0:34:96.25:0,96,1621	1/1:4,14:18:23.28:639,23,0	0/0:16,0:16:48.13:0,48,812
chr10	103496452	.	ATGTGTGTGTG	A	3643.98	PASS	AB=0.619;AC=25;AF=0.481;AN=52;BaseQRankSum=6.045;DP=714;FS=2.189;HRun=0;HaplotypeScore=210.5118;InbreedingCoeff=0.6552;MQ=47.88;MQ0=17;MQRankSum=-7.914;QD=9.82;ReadPosRankSum=-1.682;VQSLOD=2.6837;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,21:33:35.19:85,0,35	1/1:5,4:10:2.97:20,3,0	./.	./.	0/0:13,0:13:27.09:0,27,1114	0/0:8,10:19:2.53:0,3,22	1/1:12,22:35:9.92:310,10,0	1/1:16,17:32:38.44:604,38,0	0/1:8,20:28:2.46:440,0,2	0/0:31,0:30:48.15:0,48,1591	0/0:12,0:14:30.10:0,30,1075	1/1:6,23:30:12.46:290,12,0	1/1:3,15:18:11.62:365,12,0	1/1:10,23:33:8.66:192,9,0	0/0:20,0:23:50.74:0,51,1935	0/0:21,0:24:51.15:0,51,2347	0/0:24,0:28:48.15:0,48,1574	1/1:11,13:23:18.06:543,18,0	1/1:19,4:21:12.03:291,12,0	0/1:2,9:11:0:0,0,0	0/0:47,37:85:8.25:0,8,61	0/0:21,0:21:30.09:0,30,1127	0/1:8,4:12:0:1,0,0	0/1:24,29:54:0:1,0,0	1/1:9,4:13:2.95:25,3,0	0/0:23,0:25:49.04:0,49,1667	1/1:4,6:11:18.06:476,18,0	0/0:4,0:4:6.02:0,6,302
chr10	103497368	.	CT	C	3697.65	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.203;DP=669;FS=4.179;HRun=2;HaplotypeScore=84.0492;InbreedingCoeff=0.9928;MQ=86.67;MQ0=0;MQRankSum=-2.794;QD=34.56;ReadPosRankSum=0.132;VQSLOD=3.9036;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1596	0/0:11,0:11:33.11:0,33,492	0/0:17,0:16:48.15:0,48,680	0/0:35,0:35:96.15:0,96,1293	0/0:25,0:25:66.21:0,66,967	0/0:34,0:34:96.28:0,96,1393	0/0:36,0:36:99:0,105,1477	1/1:1,19:20:54.16:687,54,0	0/0:24,0:24:72.23:0,72,1058	0/0:22,0:22:63.21:0,63,929	0/0:27,0:27:78.26:0,78,1168	0/0:30,0:30:87.26:0,87,1258	0/0:23,0:23:66.17:0,66,942	0/0:20,0:20:60.17:0,60,843	0/0:25,0:25:75.25:0,75,1120	0/0:20,0:20:57.16:0,57,797	0/0:30,0:30:87.28:0,87,1283	0/0:26,0:26:75.21:0,75,1073	1/1:0,18:18:54.15:673,54,0	1/1:1,16:17:48.09:602,48,0	1/1:0,29:29:75.24:973,75,0	0/0:23,0:23:69.21:0,69,996	0/0:20,0:20:60.18:0,60,859	0/0:30,0:30:90.25:0,90,1268	0/0:14,0:14:42.14:0,42,627	0/0:30,0:30:87.29:0,87,1286	1/1:2,21:23:62.67:763,63,0	0/0:4,0:4:12.04:0,12,180
chr10	103498053	.	CTGGCCAGCGGTGTGAGGGAGT	C	8682.62	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.737;DP=647;FS=17.911;HRun=0;HaplotypeScore=356.3202;InbreedingCoeff=0.9987;MQ=86.44;MQ0=0;MQRankSum=-9.581;QD=131.55;ReadPosRankSum=1.183;VQSLOD=3.7172;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,163,13522	0/0:13,0:13:35.10:0,35,2914	0/0:22,0:22:62.88:0,63,4088	0/0:28,0:28:72.25:0,72,5341	0/0:24,0:24:69.22:0,69,5244	0/0:18,0:18:54.19:0,54,4579	0/0:24,0:24:72.25:0,72,6075	1/1:0,8:8:24.08:911,24,0	0/0:28,0:28:84.29:0,84,7302	0/0:26,0:26:78.27:0,78,6663	0/0:10,0:10:30.10:0,30,2478	0/0:32,0:32:96.33:0,96,8709	0/0:34,0:34:99:0,102,9245	0/0:34,0:34:99:0,102,8775	0/0:37,0:37:99:0,111,10114	0/0:29,0:29:84.29:0,84,8036	0/0:25,0:25:75.23:0,75,6802	0/0:28,0:28:84.29:0,84,7380	1/1:0,9:9:27.07:1475,27,0	1/1:0,11:11:27.05:1473,27,0	1/1:0,22:22:42.14:2134,42,0	0/0:16,0:16:48.16:0,48,4126	0/0:10,0:10:30.09:0,30,1895	0/0:31,0:31:93.28:0,93,8001	0/0:16,0:16:48.16:0,48,4646	0/0:27,0:27:78.27:0,78,5581	1/1:0,16:16:45.15:2689,45,0	0/0:14,0:14:42.14:0,42,3996
chr10	103498500	.	T	TC	4203.04	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-13.039;DP=687;FS=0.814;HRun=4;HaplotypeScore=91.8489;InbreedingCoeff=0.9907;MQ=86.57;MQ0=1;MQRankSum=-2.930;QD=33.09;ReadPosRankSum=-2.706;VQSLOD=2.7230;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,114,1281	0/0:4,0:4:12.03:0,12,136	0/0:22,0:22:54.15:0,54,610	0/0:24,0:23:54.12:0,54,596	0/0:26,0:26:78.22:0,78,884	0/0:23,0:23:66.16:0,66,729	0/0:37,0:37:99:0,105,1191	1/1:5,16:21:45.14:598,45,0	0/0:25,0:25:72.20:0,72,817	0/0:21,0:21:57.16:0,57,646	0/0:11,0:11:27.08:0,27,306	0/0:26,0:26:75.21:0,75,851	0/0:23,0:23:66.19:0,66,748	0/0:24,0:24:66.19:0,66,749	0/0:30,0:30:84.24:0,84,953	0/0:26,0:26:72.20:0,72,816	0/0:43,0:43:99:0,111,1239	0/0:29,0:29:72.20:0,72,817	1/1:5,13:18:39.13:533,39,0	1/1:0,23:23:60.20:819,60,0	1/1:3,42:44:99:1475,108,0	0/0:18,0:18:51.14:0,51,579	0/0:13,0:13:33.09:0,33,370	0/0:43,0:43:99:0,111,1219	0/0:19,0:19:45.13:0,45,511	0/0:21,0:21:54.15:0,54,612	1/1:0,20:20:57.19:777,57,0	0/0:7,0:7:18.05:0,18,204
chr10	103499352	.	TA	T	909.35	PASS	AB=0.754;AC=18;AF=0.321;AN=56;BaseQRankSum=0.691;DP=574;FS=5.113;HRun=16;HaplotypeScore=80.7762;InbreedingCoeff=0.2899;MQ=69.17;MQ0=2;MQRankSum=0.058;QD=3.70;ReadPosRankSum=5.095;VQSLOD=0.6682;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:20,7:29:21.71:124,0,22	1/1:5,5:10:8.54:54,9,0	0/0:16,0:12:4.02:0,4,69	0/0:14,1:10:5.66:0,6,32	0/0:21,0:22:18.29:0,18,141	0/1:9,13:23:0.68:91,0,1	1/1:5,8:13:16.74:106,17,0	0/0:14,0:22:32.98:0,33,175	0/1:10,7:17:24.03:69,0,24	0/0:19,0:20:28.67:0,29,191	0/0:12,2:16:2.51:0,3,205	1/1:9,5:14:12.71:87,13,0	1/1:12,2:15:9.71:58,10,0	0/1:12,4:16:48.95:49,0,68	0/0:20,0:20:32.81:0,33,233	0/0:21,0:21:35.79:0,36,278	0/0:32,1:34:32.27:0,32,463	0/1:16,13:31:49.41:161,0,49	0/0:12,0:19:11.60:0,12,132	0/0:10,0:33:56.55:0,57,359	0/0:6,0:6:7.56:0,8,35	0/0:25,2:27:7.09:0,7,255	0/1:12,2:15:37.28:38,0,37	1/1:6,13:20:28.39:167,28,0	0/1:12,8:20:22.55:76,0,23	0/1:21,2:23:10.41:10,0,116	0/0:13,0:34:21.26:0,21,118	0/0:19,0:19:22.89:0,23,188
chr10	103500169	.	CAGTAG	C	12521.59	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=13.069;DP=643;FS=7.356;HRun=0;HaplotypeScore=164.4090;InbreedingCoeff=0.9987;MQ=79.94;MQ0=0;MQRankSum=-19.139;QD=49.89;ReadPosRankSum=4.498;VQSLOD=4.8109;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,46:54:99:2404,111,0	1/1:1,6:7:18.06:380,18,0	0/0:23,0:23:66.21:0,66,1844	0/0:17,0:17:51.11:0,51,1411	0/0:25,0:25:69.71:0,70,2184	1/1:2,21:23:57.20:1220,57,0	1/1:2,14:16:36.12:770,36,0	0/0:28,0:28:75.26:0,75,1689	1/1:1,15:16:42.14:911,42,0	0/0:31,0:31:90.31:0,90,2801	0/0:20,0:20:60.21:0,60,1891	1/1:1,23:24:66.23:1432,66,0	1/1:1,12:13:36.12:781,36,0	1/1:2,23:25:60.21:1302,60,0	0/0:28,0:28:81.28:0,81,2523	0/0:28,0:28:78.25:0,78,2359	0/0:43,0:43:99:0,123,3888	1/1:4,18:22:42.14:912,42,0	0/0:23,0:23:57.01:0,57,1207	0/0:13,0:13:33.11:0,33,773	0/0:27,0:27:81.25:0,81,1734	0/0:13,0:13:39.13:0,39,1192	1/1:2,12:14:36.12:732,36,0	1/1:3,18:21:35.28:766,35,0	1/1:1,15:16:42.14:911,42,0	0/0:32,0:32:96.33:0,96,2909	0/0:28,0:28:78.27:0,78,1816	0/0:13,0:13:39.13:0,39,1236
chr10	103501116	.	CTAGGGG	C	1902.85	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.790;DP=595;FS=23.931;HRun=0;HaplotypeScore=139.6305;InbreedingCoeff=0.9844;MQ=84.95;MQ0=0;MQRankSum=-10.084;QD=30.69;ReadPosRankSum=-0.456;VQSLOD=1.4618;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,4410	0/0:7,0:7:21.07:0,21,763	0/0:19,0:19:57.20:0,57,1894	0/0:21,0:21:63.17:0,63,2042	0/0:15,0:15:42.14:0,42,1574	0/0:15,0:15:45.15:0,45,1680	0/0:31,0:31:93.32:0,93,3419	1/1:4,7:11:27.07:418,27,0	0/0:20,0:20:60.21:0,60,2154	0/0:24,0:24:69.24:0,69,2425	0/0:11,0:11:33.11:0,33,1123	0/0:30,0:30:90.31:0,90,3303	0/0:32,0:32:93.32:0,93,3398	0/0:29,0:29:87.28:0,87,3132	0/0:23,0:23:69.24:0,69,2532	0/0:16,0:16:48.16:0,48,1743	0/0:41,0:41:99:0,120,4411	0/0:36,0:36:99:0,108,3983	1/1:1,3:4:9.03:163,9,0	1/1:0,8:8:24.08:394,24,0	1/1:3,23:26:29.69:460,30,0	0/0:21,0:21:63.21:0,63,2208	0/0:14,0:14:39.13:0,39,1400	0/0:31,0:31:93.28:0,93,3409	0/0:16,0:16:48.16:0,48,1769	0/0:26,0:26:78.27:0,78,2881	1/1:1,12:13:39.12:639,39,0	0/0:14,0:14:42.14:0,42,1442
chr10	103501125	.	A	ACC	1849.73	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.619;DP=621;FS=24.216;HRun=1;HaplotypeScore=102.1863;InbreedingCoeff=0.9979;MQ=84.77;MQ0=0;MQRankSum=-11.174;QD=23.41;ReadPosRankSum=-2.504;VQSLOD=0.3315;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,1971	0/0:7,0:7:21.07:0,21,342	0/0:24,0:24:65.98:0,66,942	0/0:17,0:18:54.01:0,54,798	0/0:17,0:17:48.15:0,48,758	0/0:13,0:13:39.13:0,39,633	0/0:37,0:37:99:0,105,1647	1/1:4,7:10:24.08:329,24,0	0/0:18,0:18:54.16:0,54,855	0/0:22,0:22:63.21:0,63,1000	0/0:9,0:9:26.94:0,27,382	0/0:28,0:28:84.29:0,84,1367	0/0:32,0:32:93.28:0,93,1457	0/0:30,0:30:90.29:0,90,1444	0/0:23,0:23:63.22:0,63,1021	0/0:14,0:14:42.14:0,42,685	0/0:39,0:39:99:0,114,1827	0/0:39,0:39:99:0,117,1869	1/1:9,3:12:30.05:442,30,0	1/1:3,8:11:27.06:314,27,0	1/1:8,23:31:36.03:433,36,0	0/0:18,0:18:54.18:0,54,875	0/0:12,0:12:36.09:0,36,535	0/0:36,0:36:99:0,108,1687	0/0:19,0:19:54.17:0,54,853	0/0:29,0:29:84.26:0,84,1343	1/1:2,11:14:42.11:508,42,0	0/0:14,0:14:42.03:0,42,626
chr10	103502605	.	C	CCCAT	7057.28	PASS	AB=0.714;AC=23;AF=0.426;AN=54;BaseQRankSum=-10.564;DP=866;FS=5.593;HRun=0;HaplotypeScore=133.2790;InbreedingCoeff=0.8784;MQ=60.73;MQ0=17;MQRankSum=1.880;QD=19.60;ReadPosRankSum=-3.248;VQSLOD=3.8859;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:21,16:36:30.57:712,31,0	1/1:7,3:10:12.04:282,12,0	./.	0/0:35,0:19:2.68:0,3,11	0/0:28,0:28:33.10:0,33,488	1/1:17,12:29:9.03:211,9,0	1/1:27,4:29:33.02:608,33,0	0/0:32,0:29:14.99:0,15,190	1/1:14,22:37:42.14:987,42,0	0/0:51,0:50:72.24:0,72,1091	0/0:25,0:25:39.13:0,39,613	1/1:15,19:35:39.13:906,39,0	1/1:25,9:34:24.08:559,24,0	1/1:17,19:38:33.11:771,33,0	0/0:31,0:31:59.36:0,59,883	0/0:28,0:28:14.61:0,15,785	0/0:33,0:31:45.54:0,46,723	1/1:8,19:28:25.90:574,26,0	0/0:28,0:26:27.09:0,27,415	0/0:24,0:24:36.09:0,36,512	0/0:56,0:55:93.29:0,93,1412	0/0:25,0:24:48.12:0,48,675	0/1:12,7:20:32.09:239,0,32	1/1:13,15:29:36.12:854,36,0	1/1:19,9:28:15.05:355,15,0	0/0:25,0:24:45.14:0,45,686	0/0:32,0:31:45.14:0,45,685	0/0:14,0:14:30.10:0,30,471
chr10	103504017	.	T	TA	3767.62	PASS	AB=0.806;AC=35;AF=0.625;AN=56;BaseQRankSum=-2.462;DP=655;FS=0.868;HRun=14;HaplotypeScore=99.7008;InbreedingCoeff=0.6745;MQ=68.22;MQ0=3;MQRankSum=0.687;QD=8.72;ReadPosRankSum=-3.627;VQSLOD=2.0423;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,12:31:22.90:378,23,0	1/1:6,3:10:16.08:120,16,0	0/1:24,0:17:10.98:11,0,43	0/0:19,0:14:8.15:0,8,47	0/0:25,0:25:4.67:0,5,226	1/1:7,15:23:14.46:234,14,0	1/1:7,16:24:6.25:282,6,0	1/1:19,7:27:13.59:217,14,0	1/1:5,11:16:21:185,21,0	0/0:26,0:27:25.40:0,25,159	0/1:19,4:23:25.86:26,0,152	1/1:16,1:22:18.12:160,18,0	1/1:18,11:29:24.12:303,24,0	1/1:24,4:29:25.33:285,25,0	0/0:29,1:29:37.97:0,38,249	0/0:28,1:31:26.09:0,26,289	0/0:34,0:35:65.12:0,65,411	1/1:7,17:25:22.71:270,23,0	1/1:8,13:21:19.51:269,20,0	1/1:7,10:18:21.90:197,22,0	1/1:7,6:12:12:105,12,0	0/0:22,1:25:5.79:0,6,143	1/1:12,9:20:31.34:251,31,0	0/1:9,16:26:30.77:153,0,31	1/1:11,21:32:13.73:244,14,0	0/0:20,1:21:11.85:0,12,203	1/1:8,8:16:7.40:77,7,0	0/0:9,0:10:10.77:0,11,63
chr10	103505314	.	ACTCT	A	466.73	PASS	AB=0.988;AC=20;AF=0.417;AN=48;BaseQRankSum=-0.481;DP=659;FS=18.691;HRun=0;HaplotypeScore=117.9370;InbreedingCoeff=0.1954;MQ=57.69;MQ0=14;MQRankSum=2.789;QD=1.66;ReadPosRankSum=2.711;VQSLOD=1.2265;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:14.43:0,14,241	0/0:13,0:13:3.41:0,3,20	./.	0/0:35,0:21:2.37:0,2,8	1/1:25,0:23:3.30:12,3,0	0/1:17,0:17:27.19:27,0,65	1/1:22,0:20:11.72:119,12,0	0/0:51,0:49:10.21:0,10,87	0/1:28,0:27:28.82:29,0,195	0/1:23,1:25:5.33:47,0,5	0/1:15,0:15:9.56:36,0,10	0/0:16,0:16:6.02:0,6,106	0/1:28,0:28:17.72:18,0,226	0/0:31,0:30:4.53:0,5,98	1/1:21,0:22:10.39:131,10,0	./.	1/1:12,7:18:3.01:47,3,0	0/0:11,0:10:3.01:0,3,60	0/0:28,0:27:5.99:0,6,74	./.	0/0:28,0:28:8.86:0,9,154	1/1:25,0:24:1.23:63,1,0	./.	0/0:21,0:21:11.60:0,12,197	1/1:19,0:19:0.47:1,0,0	0/1:20,0:19:15.71:16,0,16	0/0:20,0:19:11.15:0,11,101	1/1:17,0:15:5.30:67,5,0
chr10	103505362	.	TCACACA	T	895.19	PASS	AB=0.778;AC=7;AF=0.125;AN=56;BaseQRankSum=2.947;DP=583;FS=1.747;HRun=0;HaplotypeScore=140.8040;InbreedingCoeff=0.6609;MQ=45.10;MQ0=45;MQRankSum=-5.813;QD=14.92;ReadPosRankSum=-0.935;VQSLOD=3.1300;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:34:53.23:0,53,1093	0/0:14,0:14:23.76:0,24,481	0/0:10,0:4:12.04:0,12,342	0/0:11,0:2:6.02:0,6,120	0/0:19,0:18:29.70:0,30,569	0/0:20,0:20:18.46:0,18,351	0/0:25,0:22:16.09:0,16,354	1/1:14,17:25:16.44:656,16,0	0/0:32,0:30:47.61:0,48,917	0/0:22,0:21:37.70:0,38,819	0/0:19,0:18:30.04:0,30,646	0/0:10,0:26:7.44:0,7,114	0/0:29,0:28:46.52:0,47,1038	0/0:25,0:24:18.62:0,19,531	0/0:31,0:30:57.43:0,57,1312	0/0:27,0:26:51.17:0,51,1240	0/0:26,0:23:27.28:0,27,899	0/0:5,0:4:6.02:0,6,170	0/1:5,2:6:4.10:200,0,4	1/1:4,9:12:3.01:45,3,0	0/0:11,12:20:5.99:0,6,49	0/0:23,0:19:38.39:0,38,693	0/0:14,0:14:12.04:0,12,308	0/0:28,0:27:46.77:0,47,1074	0/0:13,0:12:14.11:0,14,376	0/0:26,0:20:48.91:0,49,906	1/1:8,1:8:6.02:123,6,0	0/0:14,0:9:21.04:0,21,457
chr10	103505550	.	GCT	G	8071.33	PASS	AB=0.934;AC=36;AF=0.643;AN=56;BaseQRankSum=15.181;DP=918;FS=6.854;HRun=0;HaplotypeScore=150.9741;InbreedingCoeff=0.7188;MQ=58.11;MQ0=17;MQRankSum=1.186;QD=12.87;ReadPosRankSum=-0.044;VQSLOD=4.1891;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,26:39:5.47:626,5,0	1/1:5,6:11:12.04:144,12,0	0/0:31,0:12:0.08:0,0,110	0/0:40,0:20:8.92:0,9,87	0/0:21,1:21:6.10:0,6,509	1/1:4,19:23:24.07:287,24,0	1/1:10,30:38:57.13:672,57,0	1/1:20,2:15:1.25:3,1,0	1/1:9,30:38:63.01:721,63,0	0/1:38,2:39:65.24:65,0,910	0/0:18,0:18:36.12:0,36,574	1/1:6,21:22:24.07:288,24,0	1/1:9,23:31:41.96:481,42,0	1/1:7,33:36:42.03:503,42,0	0/1:49,4:33:23.04:23,0,722	0/0:45,1:28:32.37:0,32,706	0/0:28,1:29:36.17:0,36,938	1/1:3,14:17:33.10:395,33,0	1/1:7,12:13:21.01:235,21,0	1/1:11,16:29:61.33:667,61,0	1/1:18,57:73:63.79:1016,64,0	0/0:45,2:48:6.75:0,7,1120	1/1:8,12:22:33.10:396,33,0	1/1:13,43:56:77.86:873,78,0	1/1:3,17:19:33.10:396,33,0	0/0:36,0:30:39.44:0,39,938	1/1:7,11:16:24.07:280,24,0	0/0:20,1:21:18.57:0,19,656
chr10	103506062	.	TCA	T	4947.24	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=9.279;DP=765;FS=0.377;HRun=0;HaplotypeScore=127.3891;InbreedingCoeff=0.9970;MQ=59.50;MQ0=14;MQRankSum=3.654;QD=20.53;ReadPosRankSum=3.334;VQSLOD=5.3723;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,23:28:42.07:551,42,0	1/1:1,9:10:21.07:272,21,0	0/0:40,0:19:42.03:0,42,605	0/0:49,0:31:43.40:0,43,657	0/0:25,0:22:55:0,55,807	1/1:8,17:25:36.01:468,36,0	1/1:3,17:18:30.10:390,30,0	0/0:45,0:44:99:0,108,1554	1/1:7,20:27:32.01:505,32,0	0/0:33,0:32:84.23:0,84,1333	0/0:15,0:15:36.11:0,36,571	1/1:5,9:14:20.73:271,21,0	1/1:1,22:23:63.12:804,63,0	1/1:6,17:23:36.12:472,36,0	0/0:33,0:33:75.26:0,75,1268	0/0:29,0:28:34.36:0,34,888	0/0:25,0:25:66.18:0,66,1064	1/1:9,3:12:20.93:232,21,0	0/0:24,0:18:33.09:0,33,476	0/0:21,0:21:51.16:0,51,827	0/0:67,0:67:99:0,147,2353	0/0:36,0:36:79.91:0,80,1285	1/1:5,14:19:24.08:315,24,0	1/1:6,18:23:30.02:394,30,0	1/1:4,11:15:20.54:275,21,0	0/0:42,0:42:99:0,112,1729	0/0:15,0:12:36.12:0,36,616	0/0:25,0:25:72.14:0,72,1105
chr10	103506125	.	CCT	C	2508.05	PASS	AB=0.892;AC=34;AF=0.654;AN=52;BaseQRankSum=8.305;DP=458;FS=0.759;HRun=0;HaplotypeScore=81.7143;InbreedingCoeff=0.3795;MQ=45.70;MQ0=44;MQRankSum=-0.018;QD=8.22;ReadPosRankSum=0.213;VQSLOD=3.2634;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,1:18:17.71:186,18,0	0/1:3,0:2:17.98:28,0,18	./.	./.	0/0:9,0:7:6.02:0,6,77	1/1:15,1:15:26.20:290,26,0	1/1:21,0:19:15.67:178,16,0	1/1:23,0:20:38.62:267,39,0	1/1:11,4:14:14.43:148,14,0	0/1:16,0:12:32.38:32,0,169	0/1:12,0:12:18.89:19,0,118	1/1:13,0:12:6.35:84,6,0	1/1:15,0:13:24.05:266,24,0	1/1:13,2:15:20.02:190,20,0	0/1:16,0:16:11.58:12,0,225	0/0:19,0:17:6.78:0,7,214	0/0:16,0:13:18.04:0,18,231	1/1:4,12:15:5.76:69,6,0	1/1:13,0:7:11.75:79,12,0	1/1:10,0:10:4.55:28,5,0	0/0:34,0:33:0:0,0,0	0/0:16,0:15:21.05:0,21,278	0/1:1,5:6:0.06:0,0,0	1/1:23,1:23:35.76:369,36,0	1/1:14,0:12:26.93:297,27,0	0/1:16,5:20:87.77:88,0,163	1/1:14,0:14:6.12:44,6,0	0/0:11,0:7:6.02:0,6,89
chr10	103506145	.	TCTCA	T	1389.63	PASS	AB=1.000;AC=12;AF=0.222;AN=54;BaseQRankSum=-0.738;DP=498;FS=4.437;HRun=0;HaplotypeScore=93.8089;InbreedingCoeff=0.5415;MQ=54.78;MQ0=31;MQRankSum=0.041;QD=11.12;ReadPosRankSum=-2.361;VQSLOD=2.5117;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:16.01:0,16,171	0/0:4,0:3:5.50:0,6,74	0/0:31,0:9:13.55:0,14,156	0/0:41,0:8:18.50:0,19,206	0/0:12,0:12:17.97:0,18,345	0/0:16,0:16:28.17:0,28,246	0/0:19,0:17:19.66:0,20,111	1/1:2,24:27:74.74:771,75,0	0/0:21,0:20:18.69:0,19,256	0/0:21,0:18:27.76:0,28,557	0/0:17,0:17:41.85:0,42,582	0/1:10,0:10:31.17:31,0,70	0/0:16,0:15:36.54:0,37,217	0/1:13,0:13:4.30:4,0,137	0/0:21,0:21:51.90:0,52,730	0/0:18,0:16:14.06:0,14,600	0/0:14,0:12:30.04:0,30,594	0/0:19,0:19:20.54:0,21,136	1/1:13,1:12:30.02:365,30,0	1/1:9,6:14:29.88:246,30,0	./.	0/0:15,0:15:36.01:0,36,660	0/0:6,0:6:2.63:0,3,19	0/1:21,0:21:10.39:10,0,166	0/0:20,0:18:49.24:0,49,327	0/0:22,0:22:13.86:0,14,616	1/1:1,12:14:8.72:119,9,0	0/1:11,0:8:4.81:5,0,220
chr10	103506426	.	AAAT	A	1105.59	PASS	AB=1.000;AC=11;AF=0.229;AN=48;BaseQRankSum=1.271;DP=200;FS=11.220;HRun=0;HaplotypeScore=36.9478;InbreedingCoeff=0.4897;MQ=65.19;MQ0=0;MQRankSum=5.573;QD=14.36;ReadPosRankSum=-0.386;VQSLOD=1.3126;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:8.34:0,8,114	0/0:3,0:3:6.02:0,6,77	0/0:10,0:7:6.02:0,6,94	./.	0/0:7,0:7:5.98:0,6,73	0/0:7,0:7:9.03:0,9,106	0/0:4,0:4:3.01:0,3,39	1/1:17,18:35:51.17:707,51,0	0/0:6,0:6:9.03:0,9,116	0/0:5,0:5:3.01:0,3,60	0/0:2,0:2:3.01:0,3,60	0/0:3,0:3:3.01:0,3,39	0/0:3,0:3:3.01:0,3,33	0/0:6,0:6:6.01:0,6,63	./.	0/0:6,0:6:12.04:0,12,240	0/0:11,0:11:27.07:0,27,491	0/1:12,0:12:3.35:3,0,101	1/1:4,9:13:24.08:334,24,0	1/1:5,3:8:3.01:35,3,0	1/1:1,3:4:6.02:84,6,0	./.	./.	0/0:2,0:2:3.01:0,3,31	0/0:6,0:6:6.02:0,6,77	0/0:8,0:8:9.03:0,9,180	1/1:2,3:5:6.02:84,6,0	0/0:13,0:13:36.12:0,36,671
chr10	103506452	.	AT	A	143.85	PASS	AB=0.854;AC=6;AF=0.111;AN=54;BaseQRankSum=1.731;DP=186;FS=4.437;HRun=2;HaplotypeScore=32.5471;InbreedingCoeff=0.1124;MQ=55.47;MQ0=0;MQRankSum=-4.460;QD=4.23;ReadPosRankSum=-0.024;VQSLOD=0.5101;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:1.20:12,1,0	0/0:3,0:3:2.49:0,2,6	0/0:4,0:3:9.03:0,9,131	./.	0/0:7,0:7:21.04:0,21,267	0/1:5,0:5:11.44:11,0,57	0/0:2,0:2:1.25:0,1,3	0/0:36,0:36:77.49:0,77,820	0/0:5,0:5:3.38:0,3,8	0/0:3,0:3:9.03:0,9,132	0/0:3,0:3:9.02:0,9,113	0/0:1,0:1:0.89:0,1,2	0/1:4,0:4:14.07:14,0,36	0/1:4,2:6:23.23:90,0,23	0/0:2,0:2:6.02:0,6,87	0/0:5,0:5:15.05:0,15,223	0/0:16,0:16:48.15:0,48,688	0/1:4,4:8:37.68:125,0,38	0/0:10,0:10:23.11:0,23,124	0/0:6,0:6:14.38:0,14,145	0/0:6,0:6:13.47:0,13,145	0/0:1,0:1:3.01:0,3,44	0/0:2,0:2:3.76:0,4,17	0/0:1,0:1:2.50:0,2,9	0/0:7,0:7:2.13:0,2,5	0/0:8,0:8:24.07:0,24,336	0/0:8,0:8:19.49:0,19,232	0/0:16,0:16:48.13:0,48,667
chr10	103506453	.	T	TAATAATAATAAA	2908.74	PASS	AC=24;AF=0.444;AN=54;BaseQRankSum=-1.151;DP=196;FS=14.518;HRun=0;HaplotypeScore=64.1928;InbreedingCoeff=0.7714;MQ=55.85;MQ0=0;MQRankSum=-5.155;QD=46.17;ReadPosRankSum=2.616;VQSLOD=2.0025;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,5:12:6.05:527,6,0	1/1:0,2:3:6.02:376,6,0	0/0:4,0:3:9.03:0,9,124	./.	0/0:7,0:7:20.91:0,21,182	1/1:5,0:6:14.93:160,15,0	1/1:0,0:3:3.01:110,3,0	0/0:36,0:36:79.71:0,80,627	1/1:1,4:7:9.03:567,9,0	0/0:3,0:3:9.02:0,9,166	0/0:3,0:3:9:0,9,128	1/1:0,1:2:3.01:189,3,0	1/1:3,0:4:12:143,12,0	1/1:6,0:6:18:203,18,0	0/0:2,0:2:5.99:0,6,50	0/0:5,0:5:15.04:0,15,502	0/0:16,0:16:48.03:0,48,988	1/1:8,0:8:21:338,21,0	0/0:11,0:11:28.59:0,29,721	0/0:7,0:7:14.30:0,14,101	0/0:6,0:6:15.02:0,15,272	0/0:1,0:1:3:0,3,25	1/1:2,0:2:5.84:41,6,0	1/1:1,0:1:3.01:70,3,0	1/1:1,5:9:6.02:378,6,0	0/0:8,0:8:24.03:0,24,452	0/0:8,0:8:20.99:0,21,318	0/0:16,0:16:48.07:0,48,1033
chr10	103507470	.	G	GCA	16504.49	PASS	AB=0.967;AC=25;AF=0.446;AN=56;BaseQRankSum=12.677;DP=1348;FS=9.951;HRun=0;HaplotypeScore=198.2474;InbreedingCoeff=0.9305;MQ=55.88;MQ0=6;MQRankSum=3.390;QD=26.66;ReadPosRankSum=5.688;VQSLOD=5.2005;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,44:48:81.28:1366,81,0	1/1:4,22:25:57.20:962,57,0	0/0:40,0:30:62.61:0,63,764	0/0:33,0:17:26.83:0,27,302	0/0:33,0:33:72.13:0,72,925	1/1:1,23:23:45.15:759,45,0	1/1:11,26:36:60.21:1012,60,0	0/0:48,0:48:96.29:0,96,1212	1/1:7,57:67:66.74:1662,67,0	0/0:106,0:106:99:0,295,3751	0/0:39,0:39:96.27:0,96,1235	1/1:9,61:70:99:2010,120,0	1/1:11,60:72:99:2009,120,0	1/1:15,50:64:99:1855,114,0	0/0:74,0:74:99:0,171,2171	0/1:57,2:59:13.69:14,0,1458	0/0:31,0:31:69.20:0,69,884	1/1:3,28:29:63.22:1062,63,0	0/0:27,0:27:66.19:0,66,815	0/0:33,0:33:93.29:0,93,1182	0/0:114,0:113:99:0,286,3649	0/0:52,0:52:99:0,105,1336	1/1:7,35:45:90.31:1517,90,0	1/1:7,31:37:60.21:1009,60,0	1/1:6,31:37:75.26:1266,75,0	0/0:53,0:52:99:0,144,1853	0/0:25,0:25:54.18:0,54,694	0/0:20,0:20:54.17:0,54,695
chr10	103512416	.	ATCTT	A	8593.87	PASS	AB=0.565;AC=33;AF=0.589;AN=56;BaseQRankSum=12.336;DP=440;FS=9.976;HRun=0;HaplotypeScore=74.1520;InbreedingCoeff=0.9052;MQ=65.42;MQ0=0;MQRankSum=-1.361;QD=31.14;ReadPosRankSum=1.677;VQSLOD=3.8954;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,28:34:63.22:1082,63,0	1/1:2,7:9:21.07:360,21,0	0/0:7,0:6:6.02:0,6,151	0/0:8,0:6:9.50:0,9,156	0/0:20,0:20:54.13:0,54,1238	1/1:4,16:20:42.14:721,42,0	0/1:6,20:26:4.79:685,0,5	1/1:7,8:14:30.10:489,30,0	1/1:4,9:12:24.08:412,24,0	0/0:15,0:15:36.12:0,36,870	0/0:13,0:13:39.13:0,39,977	1/1:4,15:19:36.12:604,36,0	1/1:2,8:10:21.07:361,21,0	1/1:5,8:13:15.05:257,15,0	0/0:14,0:14:33.07:0,33,772	0/0:12,0:12:30.10:0,30,719	0/0:33,0:33:87.28:0,87,2130	1/1:7,20:26:42.14:721,42,0	1/1:4,15:19:42.14:700,42,0	1/1:2,12:14:36.12:605,36,0	1/1:6,10:16:20.67:360,21,0	0/0:6,0:6:15.05:0,15,309	1/1:2,6:8:11.57:205,12,0	1/1:4,7:11:12.04:206,12,0	1/1:2,10:12:27.09:464,27,0	0/0:22,0:22:57.20:0,57,1430	1/1:1,9:10:21.07:360,21,0	0/0:14,0:14:39.13:0,39,966
chr10	103512781	.	CT	C	5608.54	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=9.631;DP=429;FS=3.078;HRun=8;HaplotypeScore=43.1327;InbreedingCoeff=0.9469;MQ=68.05;MQ0=4;MQRankSum=-2.238;QD=19.54;ReadPosRankSum=3.586;VQSLOD=4.4575;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,26:32:51.07:492,51,0	1/1:0,7:7:14.97:135,15,0	0/0:16,0:8:17.61:0,18,160	0/1:9,0:5:0.78:1,0,63	0/0:11,0:11:30.06:0,30,329	1/1:1,19:20:45.07:434,45,0	1/1:2,16:18:42.07:405,42,0	1/1:5,16:21:50.81:455,51,0	1/1:0,10:10:30.05:290,30,0	0/0:16,1:17:19.16:0,19,498	0/0:18,0:18:51.12:0,51,583	1/1:0,8:8:24.04:232,24,0	1/1:0,11:11:24.04:232,24,0	1/1:0,15:15:39.06:376,39,0	0/0:8,0:8:15.01:0,15,156	0/0:6,0:6:15.01:0,15,149	0/0:15,0:15:39.12:0,39,471	1/1:3,24:27:57.09:550,57,0	1/1:6,13:16:36.04:347,36,0	1/1:2,14:15:33:310,33,0	1/1:3,13:16:27.04:261,27,0	0/0:8,0:8:21.06:0,21,252	1/1:4,8:12:23.98:222,24,0	1/1:0,16:16:33.05:318,33,0	1/1:1,9:10:19.51:200,20,0	0/0:25,0:25:72.20:0,72,850	1/1:1,19:20:36.06:348,36,0	0/0:18,0:18:54.17:0,54,652
chr10	103513160	.	T	TACAC	226.84	PASS	AB=1.000;AC=9;AF=0.281;AN=32;BaseQRankSum=-0.854;DP=315;FS=10.843;HRun=0;HaplotypeScore=56.5675;InbreedingCoeff=0.4080;MQ=67.10;MQ0=25;MQRankSum=0.525;QD=3.02;ReadPosRankSum=-1.051;VQSLOD=0.2258;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:11:0.35:0,0,1	./.	./.	./.	0/0:7,0:7:3.01:0,3,43	0/0:12,0:12:0.94:0,1,2	0/0:9,0:9:2.70:0,3,31	./.	./.	0/0:10,0:8:2.20:0,2,27	./.	./.	./.	0/0:6,0:6:3:0,3,28	1/1:18,0:16:5.64:48,6,0	1/1:9,0:9:6.01:67,6,0	0/0:18,0:17:5.90:0,6,48	0/0:17,0:15:3:0,3,27	0/0:7,0:7:0:0,0,0	./.	0/1:26,0:23:0:0,0,0	./.	./.	0/0:13,0:11:0.47:0,0,1	./.	1/1:10,3:14:12.89:188,13,0	0/0:9,0:8:2.97:0,3,20	1/1:8,0:8:3.93:24,4,0
chr10	103513259	.	CA	C	3742.52	PASS	AB=0.816;AC=34;AF=0.607;AN=56;BaseQRankSum=6.590;DP=414;FS=0.000;HRun=12;HaplotypeScore=49.6457;InbreedingCoeff=0.8166;MQ=66.74;MQ0=0;MQRankSum=0.191;QD=14.34;ReadPosRankSum=3.964;VQSLOD=3.9310;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,25:32:12.85:456,13,0	1/1:0,10:11:28.93:215,29,0	0/1:20,0:15:1.53:2,0,58	0/0:20,0:10:20.95:0,21,195	0/0:13,1:14:9.79:0,10,265	1/1:3,12:16:1.27:144,1,0	1/1:2,7:10:11.58:154,12,0	1/1:4,14:18:30.74:311,31,0	1/1:4,7:11:20.91:162,21,0	0/0:21,0:21:60:0,60,585	0/0:13,0:13:33.06:0,33,331	1/1:1,10:11:29.88:232,30,0	1/1:2,7:10:25.92:188,26,0	1/1:1,8:9:23.90:186,24,0	0/0:12,0:12:30.04:0,30,293	0/0:13,0:13:36.03:0,36,356	0/0:20,0:21:56.89:0,57,534	1/1:4,13:18:34.89:261,35,0	1/1:3,8:11:23.82:180,24,0	1/1:1,3:4:8.96:70,9,0	0/1:5,7:12:18.53:58,0,19	0/0:6,0:6:12.01:0,12,117	1/1:4,11:15:11.84:231,12,0	1/1:1,22:24:52.83:400,53,0	1/1:3,9:13:25.94:191,26,0	0/0:19,1:20:21.86:0,22,398	1/1:2,14:16:38.85:302,39,0	0/0:13,0:13:39.02:0,39,369
chr10	103513575	.	AGTGTGTGTGT	A	814.75	PASS	AB=0.949;AC=21;AF=0.500;AN=42;BaseQRankSum=3.984;DP=494;FS=1.037;HRun=0;HaplotypeScore=139.3253;InbreedingCoeff=0.4820;MQ=64.40;MQ0=11;MQRankSum=-3.383;QD=3.57;ReadPosRankSum=1.279;VQSLOD=2.6294;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:37,5:37:6.59:12,0,7	./.	./.	./.	0/0:12,0:11:18.06:0,18,699	./.	0/1:27,0:27:31.42:31,0,95	./.	1/1:22,0:22:8.98:74,9,0	0/0:19,0:18:21.07:0,21,617	0/0:12,0:12:15.05:0,15,622	0/1:19,1:19:21.44:72,0,21	1/1:13,0:13:3.01:56,3,0	1/1:14,4:18:3.01:88,3,0	0/0:21,0:22:24.08:0,24,950	0/0:15,0:17:21.07:0,21,864	0/0:29,0:28:45:0,45,1822	1/1:19,1:18:9.03:157,9,0	./.	1/1:7,0:10:6.02:125,6,0	./.	0/0:6,0:6:6.02:0,6,230	1/1:7,0:10:6.02:138,6,0	1/1:15,1:16:3.01:58,3,0	1/1:13,3:16:3.01:87,3,0	0/0:11,0:11:12.04:0,12,443	1/1:9,0:14:3.01:70,3,0	0/0:20,0:19:18.06:0,18,752
chr10	103513880	.	CT	C	1383.16	PASS	AB=0.793;AC=13;AF=0.232;AN=56;BaseQRankSum=5.376;DP=528;FS=4.735;HRun=13;HaplotypeScore=67.9523;InbreedingCoeff=0.3189;MQ=69.52;MQ0=1;MQRankSum=-0.365;QD=7.90;ReadPosRankSum=-0.586;VQSLOD=2.5412;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,2:40:18.93:0,19,469	0/0:1,0:1:3:0,3,29	0/0:17,0:14:19.64:0,20,147	0/1:11,1:10:16.11:16,0,41	0/1:9,1:10:3.90:4,0,118	0/0:15,1:19:13.81:0,14,264	0/0:17,0:21:42.77:0,43,387	1/1:11,18:29:50.52:365,51,0	0/0:20,0:20:45.05:0,45,427	0/0:14,0:16:13.93:0,14,260	0/1:7,3:11:48.53:49,0,94	0/0:21,2:23:26.15:0,26,407	0/0:19,0:19:29.83:0,30,271	0/0:13,0:17:29.86:0,30,267	0/0:24,0:24:22.22:0,22,347	0/0:13,2:15:36.04:0,36,341	0/0:34,1:35:39.24:0,39,615	0/0:16,1:18:15.53:0,16,284	0/1:12,13:27:20.03:259,0,20	1/1:1,12:13:29.76:219,30,0	1/1:5,11:16:29.78:219,30,0	0/0:12,2:14:2.06:0,2,164	0/0:17,1:18:20.58:0,21,335	0/1:16,2:18:1.34:1,0,294	0/0:17,0:18:41.87:0,42,379	0/0:12,1:16:10.95:0,11,242	0/1:8,25:33:7.28:407,0,7	0/1:4,1:6:7.05:7,0,82
chr10	103515124	.	CTT	C	12430.35	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=14.015;DP=673;FS=5.763;HRun=8;HaplotypeScore=83.0122;InbreedingCoeff=0.9997;MQ=77.28;MQ0=4;MQRankSum=-1.410;QD=29.74;ReadPosRankSum=2.878;VQSLOD=4.9256;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,42:44:99:1280,105,0	1/1:0,9:9:27.08:329,27,0	0/0:23,0:23:57.18:0,57,928	0/0:16,0:16:36.01:0,36,516	0/0:25,0:25:72.25:0,72,1215	1/1:1,21:22:60.19:732,60,0	1/1:2,28:30:72.22:878,72,0	1/1:5,24:29:72.19:855,72,0	1/1:2,25:26:60.19:732,60,0	0/0:27,0:27:75.26:0,75,1261	0/0:16,0:16:42.14:0,42,708	1/1:0,28:28:75.24:915,75,0	1/1:1,14:15:33.10:402,33,0	1/1:2,27:29:72.22:878,72,0	0/0:19,0:19:57.18:0,57,907	0/0:24,0:24:63.21:0,63,1040	0/0:51,0:51:99:0,150,2508	1/1:0,17:16:45.14:549,45,0	1/1:0,12:12:33.08:390,33,0	1/1:0,19:19:51.15:617,51,0	1/1:3,33:36:81.25:988,81,0	0/0:20,0:21:62.70:0,63,1024	1/1:1,17:18:42.13:507,42,0	1/1:4,32:35:78.24:952,78,0	1/1:1,23:24:63.20:768,63,0	0/0:22,0:22:57.20:0,57,964	1/1:0,22:22:54.17:659,54,0	0/0:11,0:11:30.10:0,30,501
chr10	103516783	.	A	AGGG	9720.31	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-4.591;DP=510;FS=6.206;HRun=7;HaplotypeScore=82.6754;InbreedingCoeff=0.9852;MQ=81.67;MQ0=1;MQRankSum=-5.034;QD=31.66;ReadPosRankSum=-0.833;VQSLOD=3.0504;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,15:19:30.10:621,30,0	1/1:1,6:8:18.04:334,18,0	0/0:12,0:12:27.07:0,27,362	0/0:20,0:20:36.10:0,36,488	0/0:21,0:21:51.16:0,51,695	1/1:5,12:19:33.09:645,33,0	1/1:4,16:23:38.94:808,39,0	1/1:11,4:19:26.98:382,27,0	1/1:3,20:24:51.15:1018,51,0	0/0:23,0:23:63.20:0,63,835	0/0:18,0:18:45.13:0,45,614	1/1:4,13:20:41.13:731,41,0	1/1:7,8:16:21.01:354,21,0	1/1:3,9:17:33.05:556,33,0	0/0:7,0:7:18.04:0,18,229	0/0:15,0:15:45.12:0,45,580	0/0:28,0:28:75.24:0,75,1021	1/1:5,16:23:60.13:1094,60,0	1/1:8,2:13:24.02:341,24,0	1/1:4,7:14:17.66:325,18,0	1/1:8,12:21:8.98:187,9,0	0/0:25,0:25:69.18:0,69,902	1/1:2,9:12:21.07:435,21,0	1/1:4,20:26:48.14:957,48,0	1/1:2,12:16:21.07:435,21,0	0/0:17,0:17:48.09:0,48,618	1/1:3,12:16:24.08:497,24,0	0/0:17,0:17:48.15:0,48,654
chr10	103518338	.	G	GCCC	3679.26	PASS	AB=0.753;AC=34;AF=0.607;AN=56;BaseQRankSum=2.229;DP=424;FS=3.021;HRun=9;HaplotypeScore=71.4630;InbreedingCoeff=0.7573;MQ=76.32;MQ0=0;MQRankSum=-1.000;QD=14.32;ReadPosRankSum=-4.147;VQSLOD=-0.1332;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:10,9:20:18.06:344,18,0	1/1:2,3:5:5.99:76,6,0	0/1:21,0:21:9.99:10,0,254	0/0:16,0:17:14.95:0,15,171	0/0:15,0:15:42.13:0,42,529	1/1:10,1:12:20.73:310,21,0	1/1:8,9:24:33.08:496,33,0	1/1:8,0:9:7.25:72,7,0	0/1:2,8:11:22.88:185,0,23	0/0:21,0:21:42.09:0,42,531	0/0:8,0:8:21.06:0,21,265	1/1:7,10:18:13.79:183,14,0	1/1:7,4:11:9:119,9,0	1/1:2,9:11:18.06:305,18,0	0/0:13,0:13:30.07:0,30,379	0/0:16,0:16:29.99:0,30,379	0/0:30,0:31:90.22:0,90,1117	1/1:4,20:26:36.08:638,36,0	1/1:6,0:19:26.85:171,27,0	1/1:2,0:4:4.23:26,4,0	1/1:4,0:23:37.10:278,37,0	0/0:13,0:13:21.04:0,21,265	1/1:1,3:6:9.02:146,9,0	1/1:7,1:12:6.01:97,6,0	1/1:6,4:11:6:82,6,0	0/0:22,0:22:51.10:0,51,643	1/1:3,0:13:20.42:143,20,0	0/0:11,0:11:24.03:0,24,303
chr10	103521082	.	CA	C	5775.82	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=12.534;DP=582;FS=0.000;HRun=10;HaplotypeScore=59.6056;InbreedingCoeff=0.9566;MQ=81.30;MQ0=0;MQRankSum=0.292;QD=21.39;ReadPosRankSum=3.003;VQSLOD=5.6757;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,34:40:95.10:832,95,0	1/1:0,3:3:9:78,9,0	0/0:17,0:16:29.53:0,30,323	0/0:17,0:17:1.28:0,1,139	0/0:20,0:20:54.11:0,54,578	1/1:2,17:19:47.99:417,48,0	1/1:4,20:24:56.98:495,57,0	0/0:24,1:26:48.96:0,49,737	1/1:1,22:23:56.99:495,57,0	0/0:21,1:22:31.09:0,31,566	0/0:22,0:22:60.16:0,60,664	1/1:2,26:28:71.98:625,72,0	1/1:4,14:18:41.99:365,42,0	1/1:1,22:23:62.99:547,63,0	0/0:22,0:22:60.15:0,60,657	0/0:12,0:12:36.10:0,36,398	0/0:25,1:26:49.13:0,49,756	1/1:0,28:28:74.99:651,75,0	0/0:21,0:21:48.11:0,48,510	0/0:12,0:12:30.08:0,30,332	0/0:30,0:30:84.22:0,84,921	0/0:22,0:22:63.14:0,63,679	1/1:2,16:18:41.98:365,42,0	1/1:5,25:30:68.98:599,69,0	1/1:2,14:16:12.36:309,12,0	0/0:16,0:16:45.11:0,45,491	0/0:15,0:15:45.12:0,45,498	0/0:12,0:12:36.07:0,36,382
chr10	103522453	.	GTGGGTGTCTTGA	G	175.13	PASS	AB=1.000;AC=7;AF=0.135;AN=52;BaseQRankSum=4.491;DP=573;FS=7.865;HRun=0;HaplotypeScore=93.2283;InbreedingCoeff=0.6116;MQ=36.85;MQ0=130;MQRankSum=0.368;QD=5.31;ReadPosRankSum=-2.521;VQSLOD=0.6061;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:17:38.82:0,39,468	0/0:9,0:5:6.02:0,6,105	./.	./.	0/0:27,0:17:26.44:0,26,422	0/0:25,0:13:27.96:0,28,470	0/0:26,0:9:5.14:0,5,103	0/0:12,0:10:12.02:0,12,158	0/0:18,0:12:12.01:0,12,166	0/0:26,0:12:28.30:0,28,530	0/0:18,0:11:21.77:0,22,328	0/0:15,0:12:21.06:0,21,316	0/0:15,0:11:27.05:0,27,397	0/0:23,0:21:33.11:0,33,620	0/0:18,0:15:30.09:0,30,608	0/0:14,0:10:20.73:0,21,402	0/0:16,0:10:18.06:0,18,323	0/0:23,0:18:42.14:0,42,737	0/1:6,0:3:44.95:45,0,75	1/1:5,4:7:6.02:70,6,0	1/1:11,0:8:9.03:143,9,0	0/0:20,0:14:27.05:0,27,395	0/0:8,0:4:9.03:0,9,143	0/0:14,0:10:21.07:0,21,360	0/0:25,0:14:36.12:0,36,565	0/0:35,0:20:52.25:0,52,897	1/1:7,0:5:2.87:41,3,0	0/0:28,0:22:51.17:0,51,867
chr10	103524989	.	C	CA	6403.01	PASS	AB=0.984;AC=32;AF=0.571;AN=56;BaseQRankSum=-9.009;DP=509;FS=6.498;HRun=3;HaplotypeScore=63.2890;InbreedingCoeff=0.7674;MQ=78.37;MQ0=3;MQRankSum=-2.854;QD=20.07;ReadPosRankSum=1.346;VQSLOD=4.2526;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:54.18:719,54,0	1/1:0,6:5:12.04:160,12,0	0/0:32,0:22:55.14:0,55,462	0/0:23,0:17:17.20:0,17,236	0/0:15,0:15:38.98:0,39,413	1/1:2,16:18:45.15:598,45,0	1/1:2,11:14:21.01:259,21,0	1/1:35,0:35:44.65:366,45,0	1/1:1,6:8:21.07:279,21,0	0/0:11,0:11:27:0,27,280	0/0:14,0:14:35.72:0,36,364	1/1:0,17:17:45.15:599,45,0	1/1:0,22:22:45.15:599,45,0	1/1:0,15:15:32.78:440,33,0	0/0:14,0:14:42.10:0,42,478	0/1:14,1:15:13.39:13,0,316	0/0:31,0:31:90.17:0,90,1016	1/1:2,14:16:38.71:518,39,0	1/1:23,0:21:26.16:170,26,0	0/1:16,0:16:0.38:89,0,0	0/1:14,0:14:3.78:38,0,4	0/0:16,0:16:41.70:0,42,462	1/1:5,17:22:36.12:474,36,0	1/1:2,12:14:33.11:439,33,0	1/1:3,24:27:45.15:599,45,0	0/0:28,0:28:66.14:0,66,728	0/1:14,0:14:6.41:42,0,6	0/0:5,0:5:12.04:0,12,143
chr10	103525156	.	CGT	C	8505.60	PASS	AB=0.963;AC=36;AF=0.643;AN=56;BaseQRankSum=7.744;DP=690;FS=1.247;HRun=0;HaplotypeScore=109.7984;InbreedingCoeff=0.8362;MQ=67.82;MQ0=7;MQRankSum=-0.339;QD=18.21;ReadPosRankSum=2.938;VQSLOD=5.2382;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,7:20:32.91:357,33,0	1/1:1,2:4:8.86:85,9,0	0/0:38,0:23:14.97:0,15,206	0/0:43,0:36:46.71:0,47,648	0/1:18,0:19:2.61:3,0,400	1/1:7,7:14:30.05:345,30,0	1/1:13,10:23:48:536,48,0	1/1:28,7:35:47.29:491,47,0	1/1:9,16:25:48.11:572,48,0	0/1:41,0:41:10.26:10,0,786	0/0:18,1:19:15.39:0,15,693	1/1:5,14:19:45.13:534,45,0	1/1:8,16:25:53.94:619,54,0	1/1:13,13:26:50.72:567,51,0	0/0:24,0:25:52.08:0,52,942	0/0:21,0:22:31.01:0,31,648	0/0:31,1:32:42.15:0,42,1037	1/1:15,14:28:65.62:736,66,0	1/1:11,28:39:76.11:891,76,0	1/1:8,7:15:29.92:334,30,0	1/1:24,27:51:78.17:899,78,0	0/0:16,0:16:42.09:0,42,605	1/1:3,15:18:36.11:429,36,0	1/1:12,10:21:32.76:343,33,0	1/1:11,10:22:39.12:459,39,0	0/0:21,1:21:3.51:0,4,541	1/1:10,4:13:26.91:295,27,0	0/0:5,0:5:11.71:0,12,154
chr10	103525207	.	GTA	G	2764.55	PASS	AB=0.959;AC=22;AF=0.423;AN=52;BaseQRankSum=11.797;DP=768;FS=3.389;HRun=0;HaplotypeScore=158.2576;InbreedingCoeff=0.0352;MQ=49.19;MQ0=56;MQRankSum=1.039;QD=5.12;ReadPosRankSum=2.750;VQSLOD=3.3291;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:34:37.60:245,38,0	0/1:9,0:8:5.80:37,0,6	./.	./.	0/0:15,0:14:38.92:0,39,625	1/1:18,0:18:32.63:167,33,0	0/1:45,0:41:66.48:66,0,92	0/1:59,0:42:99:128,0,171	0/1:34,0:33:62.52:164,0,63	0/0:41,0:32:83.34:0,83,1383	0/0:16,0:14:22.09:0,22,542	0/1:31,0:30:72.12:144,0,72	0/1:32,0:30:39.84:213,0,40	1/1:28,0:26:3.64:180,4,0	0/0:32,0:29:80.80:0,81,1280	0/0:26,0:24:62.30:0,62,1038	0/0:41,0:40:86.19:0,86,1761	0/1:28,0:28:32.93:176,0,33	0/1:28,1:25:99:148,0,129	1/1:16,0:14:10.97:48,11,0	0/1:52,20:63:58.94:594,0,59	0/0:19,0:18:47.70:0,48,748	0/1:23,0:23:65.95:89,0,66	1/1:41,1:42:24.55:258,25,0	0/1:25,0:25:21.87:118,0,22	0/0:31,1:25:31.48:0,31,854	0/1:9,4:10:44.61:164,0,45	0/0:6,0:5:12.01:0,12,163
chr10	103525209	.	ATG	A	7379.68	PASS	AB=1.000;AC=33;AF=0.635;AN=52;BaseQRankSum=10.696;DP=771;FS=12.357;HRun=0;HaplotypeScore=143.5405;InbreedingCoeff=0.9132;MQ=49.35;MQ0=55;MQRankSum=-1.933;QD=13.67;ReadPosRankSum=-2.219;VQSLOD=3.8900;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,30:35:57.65:714,58,0	1/1:4,5:8:11.99:150,12,0	./.	./.	0/0:15,0:14:31.92:0,32,492	1/1:7,11:18:30.06:362,30,0	1/1:16,29:41:17.12:223,17,0	1/1:57,0:42:53.98:561,54,0	1/1:14,20:33:41.95:511,42,0	0/0:41,0:32:75.26:0,75,1213	0/0:15,0:13:27.09:0,27,442	1/1:13,18:31:44.97:527,45,0	1/1:17,14:29:51.06:616,51,0	1/1:13,16:27:39.59:482,40,0	0/0:30,0:27:63.20:0,63,988	0/0:28,0:26:57.18:0,57,891	0/0:43,0:42:99:0,102,1539	1/1:10,18:28:34.58:597,35,0	1/1:25,3:24:41.94:422,42,0	1/1:14,2:14:12.02:135,12,0	1/1:73,2:65:19.40:343,19,0	0/0:20,0:19:40:0,40,592	1/1:14,7:21:30.98:369,31,0	1/1:9,32:42:63.03:762,63,0	1/1:6,19:25:41.72:497,42,0	0/0:32,0:25:47.92:0,48,710	0/1:14,0:11:3.34:108,0,3	0/0:6,0:5:6.02:0,6,96
chr10	103525211	.	GTGTGTGTGTGTGTA	G	4957.67	PASS	AB=1.000;AC=19;AF=0.365;AN=52;BaseQRankSum=1.897;DP=768;FS=2.410;HRun=0;HaplotypeScore=287.6593;InbreedingCoeff=0.2052;MQ=49.39;MQ0=55;MQRankSum=-2.484;QD=10.66;ReadPosRankSum=-5.418;VQSLOD=2.6075;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:23.57:0,24,1288	0/0:8,0:7:12.02:0,12,311	./.	./.	0/0:15,0:14:31.92:0,32,1109	0/1:19,0:19:99:112,0,552	0/1:45,0:41:14.11:14,0,277	1/1:25,28:38:84.10:1097,84,0	0/1:34,0:33:99:171,0,438	0/0:41,0:32:75.26:0,75,2998	0/0:14,0:12:27.09:0,27,884	0/1:31,0:30:92.49:92,0,592	0/1:31,0:29:49.11:49,0,577	0/1:28,0:26:72.57:73,0,608	0/0:31,0:28:65.94:0,66,2497	0/0:28,0:26:57.20:0,57,2187	0/0:43,0:42:99:0,105,3971	0/1:29,0:29:99:146,0,683	1/1:25,1:21:45.09:707,45,0	1/1:8,9:15:12.02:135,12,0	1/1:75,0:65:63.19:1754,63,0	0/0:20,0:19:42.14:0,42,1657	0/1:22,0:22:74.45:74,0,524	0/1:41,0:41:7.15:7,0,1576	0/0:25,0:25:5.42:0,5,1027	0/0:33,0:26:51.17:0,51,2254	1/1:14,0:11:5.16:527,5,0	0/0:6,0:5:6.02:0,6,168
chr10	103525225	.	A	ATG	1618.32	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=6.253;DP=767;FS=22.608;HRun=0;HaplotypeScore=146.6060;InbreedingCoeff=0.8605;MQ=49.01;MQ0=54;MQRankSum=-3.127;QD=9.81;ReadPosRankSum=-4.458;VQSLOD=1.1827;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:81.69:0,82,968	0/0:8,0:7:12.04:0,12,148	0/0:14,0:1:3.01:0,3,38	0/0:13,0:2:1.80:0,2,5	0/0:17,0:17:39.12:0,39,475	0/0:20,0:20:25.26:0,25,333	0/0:38,0:34:20.46:0,20,229	1/1:50,0:36:50.87:483,51,0	0/0:31,0:30:26.63:0,27,319	0/0:40,0:33:63.97:0,64,926	0/0:14,0:12:27.08:0,27,330	0/0:29,0:28:44.96:0,45,524	0/0:27,0:25:50.20:0,50,539	0/0:24,0:22:33.10:0,33,397	0/0:27,0:24:60.17:0,60,744	0/0:26,0:24:59.19:0,59,698	0/0:41,0:40:99:0,101,1236	0/0:30,0:30:60.11:0,60,689	1/1:28,0:22:32.28:349,32,0	./.	1/1:66,4:61:59.52:715,60,0	0/0:19,0:19:41.83:0,42,478	0/0:18,0:18:27.01:0,27,309	0/0:41,0:41:69.19:0,69,824	0/0:24,0:24:41.53:0,42,521	0/0:32,0:26:57.18:0,57,711	1/1:14,3:14:25.29:228,25,0	0/0:4,0:3:3.01:0,3,38
chr10	103525459	.	A	AAGG	5218.76	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-9.718;DP=733;FS=1.375;HRun=0;HaplotypeScore=103.6254;InbreedingCoeff=0.9587;MQ=69.53;MQ0=1;MQRankSum=-0.618;QD=34.79;ReadPosRankSum=-1.209;VQSLOD=5.2569;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:90.28:0,90,1292	0/0:5,0:5:6.02:0,6,88	0/0:26,0:19:30.09:0,30,396	0/0:30,0:25:9.18:0,9,320	0/0:11,0:12:21.04:0,21,284	0/0:16,0:16:39.12:0,39,553	0/0:30,0:31:51.35:0,51,963	1/1:7,13:21:39.12:727,39,0	0/0:21,0:21:48.13:0,48,662	0/0:26,0:26:54.18:0,54,771	0/0:14,0:14:33.11:0,33,482	0/0:50,0:50:99:0,105,1517	0/0:26,0:26:75.21:0,75,1034	0/0:33,0:33:81.22:0,81,1145	0/0:25,0:25:60.20:0,60,876	0/0:29,0:29:72.66:0,73,964	0/0:30,0:30:81.25:0,81,1147	0/0:31,0:31:75.19:0,75,1016	1/1:15,9:26:42.07:722,42,0	1/1:7,13:20:36.11:709,36,0	1/1:16,42:63:99:2266,111,0	0/0:17,0:17:33.11:0,33,483	0/0:17,0:17:42.13:0,42,598	0/0:47,0:47:99:0,111,1584	0/0:20,0:20:42.13:0,42,595	0/0:29,0:29:60.19:0,60,844	1/1:5,15:20:39.13:794,39,0	0/0:7,0:7:15.05:0,15,217
chr10	103525960	.	A	AGT	2929.77	PASS	AB=0.818;AC=29;AF=0.518;AN=56;BaseQRankSum=-0.101;DP=690;FS=0.000;HRun=0;HaplotypeScore=117.7462;InbreedingCoeff=0.2491;MQ=67.95;MQ0=11;MQRankSum=1.575;QD=5.53;ReadPosRankSum=-2.121;VQSLOD=2.8342;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,16:38:12.94:346,13,0	0/1:5,3:10:4.48:82,0,4	0/1:35,0:19:0:0,0,0	0/1:44,0:25:0:1,0,0	0/0:19,0:20:32.92:0,33,342	1/1:17,5:23:9.03:135,9,0	0/1:22,6:30:26.64:204,0,27	1/1:26,0:25:17.55:128,18,0	0/1:14,3:18:62.20:118,0,62	0/0:26,0:26:17.53:0,18,190	0/0:8,0:8:9.02:0,9,99	0/1:14,9:26:47.16:308,0,47	1/1:14,3:17:18.04:242,18,0	0/1:19,5:24:47.38:162,0,47	0/0:14,0:15:8.84:0,9,71	0/0:20,0:23:33.22:0,33,326	0/1:35,1:36:9.79:10,0,378	0/1:17,6:23:81.10:117,0,81	1/1:16,0:17:8.41:50,8,0	1/1:13,0:13:6.90:70,7,0	1/1:43,0:43:20.45:172,20,0	0/0:18,0:20:26.90:0,27,278	1/1:17,8:26:4.09:212,4,0	0/1:15,14:34:96.70:536,0,97	0/1:15,6:23:10.17:165,0,10	0/0:18,0:21:11.04:0,11,74	1/1:13,0:21:6.94:54,7,0	0/0:25,0:27:38.92:0,39,402
chr10	103526306	.	TA	T	1564.29	PASS	AB=0.947;AC=12;AF=0.214;AN=56;BaseQRankSum=6.994;DP=617;FS=6.940;HRun=12;HaplotypeScore=74.7967;InbreedingCoeff=0.7806;MQ=75.22;MQ0=0;MQRankSum=0.956;QD=11.34;ReadPosRankSum=0.105;VQSLOD=3.0845;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:35:80.98:0,81,800	0/0:10,2:13:9.66:0,10,265	0/0:20,0:19:15.81:0,16,280	0/1:12,0:10:9.87:10,0,25	0/0:22,2:25:7.46:0,7,419	0/0:20,0:20:42.97:0,43,428	0/1:15,2:17:1.39:1,0,345	1/1:6,17:23:41.79:319,42,0	0/0:16,1:18:9.75:0,10,307	0/0:25,0:25:57.07:0,57,560	0/0:20,1:22:15.71:0,16,321	0/0:23,0:26:53.76:0,54,504	0/0:21,0:21:54:0,54,511	0/0:28,1:29:42.84:0,43,594	0/0:21,0:22:44.21:0,44,471	0/0:24,0:25:56.95:0,57,562	0/0:35,2:37:46.68:0,47,827	0/0:9,0:9:21.03:0,21,207	1/1:5,17:22:23.35:364,23,0	1/1:3,18:21:44.79:348,45,0	1/1:6,13:18:11.38:271,11,0	0/0:21,1:22:9.83:0,10,281	0/0:25,0:25:60.06:0,60,587	0/0:30,1:31:42.88:0,43,611	0/0:18,0:18:44.86:0,45,418	0/0:25,0:26:56.92:0,57,547	1/1:5,18:23:55.81:424,56,0	0/0:8,0:9:23.87:0,24,222
chr10	103529401	.	A	AGT	907.12	PASS	AB=0.874;AC=28;AF=0.583;AN=48;BaseQRankSum=-0.008;DP=547;FS=1.022;HRun=0;HaplotypeScore=83.2179;InbreedingCoeff=0.1499;MQ=71.48;MQ0=19;MQRankSum=-1.833;QD=2.99;ReadPosRankSum=0.560;VQSLOD=1.7228;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:14.60:140,15,0	1/1:8,2:10:2.75:44,3,0	./.	./.	0/0:13,0:13:3.01:0,3,32	./.	0/1:10,4:16:22.71:61,0,23	./.	1/1:14,3:16:6.02:81,6,0	0/0:25,0:24:1.06:0,1,28	0/1:8,0:8:25.69:36,0,26	1/1:11,5:16:2.90:44,3,0	1/1:11,2:16:3.01:44,3,0	0/1:16,0:16:31.09:54,0,31	0/0:17,0:17:3.48:0,3,33	0/0:17,0:17:14.83:0,15,118	0/1:21,0:22:6.28:6,0,85	0/1:18,3:23:3.19:79,0,3	1/1:16,0:14:3:26,3,0	1/1:14,0:14:5.99:51,6,0	1/1:26,0:23:2.98:22,3,0	0/0:15,0:15:12:0,12,112	1/1:16,0:16:9.03:119,9,0	0/1:18,9:32:16.76:160,0,17	1/1:19,0:19:6.01:62,6,0	0/0:21,0:21:1.27:0,1,28	1/1:10,0:10:3:25,3,0	0/0:20,0:19:6.01:0,6,64
chr10	103531121	.	TAC	T	2183.35	PASS	AB=0.841;AC=32;AF=0.571;AN=56;BaseQRankSum=11.424;DP=805;FS=2.544;HRun=0;HaplotypeScore=145.1514;InbreedingCoeff=0.3151;MQ=54.44;MQ0=11;MQRankSum=-6.326;QD=3.56;ReadPosRankSum=4.327;VQSLOD=2.3959;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:54,0:54:4.09:18,4,0	1/1:16,0:17:1.78:69,2,0	0/0:26,0:12:2.98:0,3,21	0/0:29,0:23:6:0,6,70	0/0:18,0:18:3.48:0,3,555	1/1:23,0:23:3.37:9,3,0	1/1:28,0:28:3.15:14,3,0	0/1:13,14:27:43.89:378,0,44	1/1:32,0:31:19.92:99,20,0	0/0:28,0:26:25.21:0,25,771	0/0:15,0:15:19.83:0,20,547	0/1:30,0:30:2.44:52,0,2	1/1:35,0:35:21.47:101,21,0	1/1:32,0:33:14.16:69,14,0	0/1:23,3:27:4.47:4,0,796	0/0:31,1:32:82.24:0,82,1175	0/1:34,4:38:23.20:23,0,991	0/1:34,0:34:30.77:35,0,31	0/1:12,10:21:6.36:238,0,6	1/1:4,10:15:14.88:155,15,0	1/1:14,46:62:68.37:723,68,0	0/1:27,1:28:0.09:0,0,745	1/1:19,0:19:3.49:16,3,0	1/1:46,0:46:2.84:14,3,0	1/1:19,0:19:14.73:65,15,0	0/0:32,0:32:16.85:0,17,807	0/1:8,14:22:10.02:275,0,10	0/0:11,0:11:27.09:0,27,410
chr10	103531130	.	ACACACACACACACACG	A	6625.11	PASS	AB=0.561;AC=21;AF=0.375;AN=56;BaseQRankSum=11.213;DP=794;FS=0.000;HRun=0;HaplotypeScore=250.0552;InbreedingCoeff=0.7089;MQ=52.92;MQ0=16;MQRankSum=-10.464;QD=18.40;ReadPosRankSum=6.015;VQSLOD=2.7186;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,46:52:9.48:288,9,0	0/1:2,15:17:6.02:936,0,6	0/0:28,0:5:5.98:0,6,63	0/0:32,0:14:24.07:0,24,374	0/0:19,0:19:57.18:0,57,2690	1/1:3,18:21:9.86:274,10,0	1/1:7,25:31:3.29:139,3,0	0/0:29,0:29:78.16:0,78,1596	1/1:4,31:34:21.07:870,21,0	0/0:28,0:26:73.09:0,73,3487	0/0:16,0:16:48.16:0,48,2682	1/1:4,22:26:20.32:716,20,0	1/1:1,33:34:24.08:994,24,0	1/1:3,27:30:15.05:692,15,0	0/0:29,0:29:78.25:0,78,3706	0/0:29,0:29:84.29:0,84,5412	0/0:38,0:38:99:0,106,5492	0/1:11,21:32:53.01:529,0,53	0/0:20,0:19:50.81:0,51,1186	0/0:14,0:13:15.05:0,15,745	0/0:67,0:67:99:0,105,4055	0/0:28,0:28:66.23:0,66,3646	1/1:1,18:19:6.02:260,6,0	0/1:8,37:45:15.97:141,0,16	1/1:6,11:17:18.06:785,18,0	0/0:29,0:29:84.28:0,84,3457	0/0:19,0:19:24.93:0,25,1332	0/0:9,0:9:27.09:0,27,1927
chr10	103533631	.	CTCTTTTCTTT	C	889.18	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=3.615;DP=694;FS=3.943;HRun=0;HaplotypeScore=217.0973;InbreedingCoeff=0.2256;MQ=48.37;MQ0=48;MQRankSum=0.304;QD=8.98;ReadPosRankSum=-1.017;VQSLOD=2.5160;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:14.87:0,15,131	0/0:7,0:7:2.97:0,3,20	0/0:60,0:6:0:0,0,0	0/0:91,0:15:2.84:0,3,9	1/1:13,19:32:50.90:884,51,0	0/0:10,0:10:5.87:0,6,35	0/0:17,0:17:2.04:0,2,38	0/0:32,0:21:3.45:0,3,23	0/0:18,0:19:2.74:0,3,18	0/0:37,0:36:69.24:0,69,2648	0/0:26,0:26:24.08:0,24,822	0/0:13,0:13:5.85:0,6,39	0/0:16,0:16:8.29:0,8,75	0/0:7,0:7:5.96:0,6,45	0/0:28,0:28:57.18:0,57,1959	0/0:13,0:27:33.10:0,33,753	0/0:25,0:25:45.15:0,45,1532	0/1:18,0:18:19.53:57,0,20	0/0:22,0:18:17.98:0,18,483	0/1:23,0:23:2.13:2,0,362	0/1:9,0:9:11.04:57,0,11	0/0:22,0:22:42.14:0,42,1410	0/0:7,0:20:0.47:0,0,1	0/1:17,0:16:0.94:1,0,23	0/0:21,0:21:12.61:0,13,96	0/0:33,0:33:57.20:0,57,2205	0/0:11,0:11:12.40:0,12,217	0/0:23,0:23:39.13:0,39,1727
chr10	103533654	.	T	TC	1604.08	PASS	AB=0.790;AC=14;AF=0.250;AN=56;BaseQRankSum=3.145;DP=601;FS=1.838;HRun=1;HaplotypeScore=116.1378;InbreedingCoeff=-0.2622;MQ=49.19;MQ0=35;MQRankSum=-4.716;QD=7.71;ReadPosRankSum=-3.788;VQSLOD=-0.5266;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,8:25:99:127,0,567	0/1:4,3:7:76.28:76,0,148	0/1:27,0:5:5.59:6,0,85	0/0:71,0:9:20.74:0,21,182	0/0:26,0:26:72.16:0,72,867	0/1:8,3:11:99:202,0,200	0/1:9,11:20:99:331,0,258	0/0:19,0:12:31.32:0,31,251	0/1:11,8:19:99:314,0,341	0/0:31,0:30:64.33:0,64,1164	0/0:22,0:22:66.20:0,66,885	0/1:10,2:12:59.16:59,0,378	0/1:6,5:11:99:161,0,221	0/1:3,3:6:88.54:125,0,89	0/0:29,0:29:87.27:0,87,1183	0/0:30,0:30:59.63:0,60,666	0/0:23,0:23:69.21:0,69,946	0/1:11,4:15:99:116,0,304	0/0:22,0:15:33.99:0,34,404	0/0:20,0:20:51.52:0,52,623	0/1:7,1:8:11.04:11,0,106	0/0:25,0:25:75.24:0,75,1030	0/1:13,0:13:0.01:0,0,0	0/1:13,5:17:95.78:96,0,431	0/1:12,4:16:99:131,0,446	0/0:38,0:38:99:0,111,1491	0/0:13,0:13:34.36:0,34,390	0/0:24,0:24:72.21:0,72,960
chr10	103533982	.	CG	C	11074.09	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=11.244;DP=664;FS=2.228;HRun=7;HaplotypeScore=71.4121;InbreedingCoeff=0.9997;MQ=90.11;MQ0=0;MQRankSum=-2.676;QD=26.00;ReadPosRankSum=2.267;VQSLOD=5.6330;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,46:51:99:1347,132,0	1/1:0,13:13:36.04:356,36,0	0/0:32,0:32:81.17:0,81,969	0/0:23,0:22:42.43:0,42,482	0/0:23,0:23:66.20:0,66,816	1/1:1,21:22:60.14:612,60,0	1/1:2,21:23:63.14:643,63,0	1/1:3,26:29:75.12:745,75,0	1/1:2,12:14:33.07:337,33,0	0/0:17,0:17:48.15:0,48,603	0/0:13,0:13:33.11:0,33,414	1/1:3,29:32:84.19:857,84,0	1/1:3,23:26:63.14:642,63,0	1/1:5,15:20:36.08:367,36,0	0/0:23,0:23:69.18:0,69,840	0/0:14,0:14:42.11:0,42,513	0/0:36,0:36:96.24:0,96,1174	1/1:1,28:29:81.18:826,81,0	1/1:3,21:24:60.13:612,60,0	1/1:0,18:18:42.09:428,42,0	1/1:2,27:29:78.17:796,78,0	0/0:21,0:21:54.15:0,54,662	1/1:2,20:22:51.12:520,51,0	1/1:4,27:31:81.18:826,81,0	1/1:0,22:22:54.12:550,54,0	0/0:25,0:25:69.20:0,69,836	1/1:0,21:21:60.14:612,60,0	0/0:11,0:11:27.06:0,27,313
chr10	103534288	.	CGT	C	899.38	PASS	AB=0.861;AC=13;AF=0.232;AN=56;BaseQRankSum=-1.012;DP=573;FS=4.182;HRun=0;HaplotypeScore=119.7404;InbreedingCoeff=0.3240;MQ=58.88;MQ0=2;MQRankSum=4.036;QD=5.00;ReadPosRankSum=-0.059;VQSLOD=2.8362;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:6.01:0,6,66	0/0:10,0:9:15:0,15,139	0/0:23,0:15:3.01:0,3,43	0/0:23,0:14:2.98:0,3,22	1/1:13,7:22:14.54:109,15,0	0/0:10,0:10:8.99:0,9,76	0/0:21,0:21:2.99:0,3,23	0/0:27,0:27:41.63:0,42,339	0/0:25,0:25:21:0,21,181	0/1:20,0:20:12.30:12,0,247	0/1:7,0:7:4.75:5,0,167	0/0:22,0:22:15.43:0,15,125	0/0:23,0:23:15:0,15,139	0/0:18,0:18:12:0,12,103	1/1:7,8:14:18.05:200,18,0	0/1:7,8:17:15.97:210,0,16	0/1:29,8:37:99:101,0,682	0/0:18,0:17:26.91:0,27,218	0/0:14,0:14:12.87:0,13,129	0/0:10,0:9:3:0,3,26	0/0:48,0:48:8.75:0,9,88	1/1:11,5:18:9.16:62,9,0	0/0:8,0:8:3:0,3,26	0/0:29,0:29:5.34:0,5,38	0/0:16,0:16:18:0,18,155	0/1:29,4:35:33.28:249,0,33	0/0:24,0:23:17.40:0,17,138	1/1:3,5:9:11.87:114,12,0
chr10	103534324	.	T	TGTGTGTGC	6976.79	PASS	AB=0.640;AC=31;AF=0.554;AN=56;BaseQRankSum=-2.146;DP=622;FS=1.538;HRun=0;HaplotypeScore=141.7370;InbreedingCoeff=0.7248;MQ=60.04;MQ0=2;MQRankSum=-7.350;QD=16.08;ReadPosRankSum=-2.801;VQSLOD=3.3929;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:36:9.03:141,9,0	0/1:7,0:15:6.87:344,0,7	0/0:11,0:7:0.88:0,1,18	0/0:16,0:7:3:0,3,26	0/0:16,0:16:33.02:0,33,482	1/1:2,17:21:6.02:260,6,0	0/1:4,23:32:0.04:0,0,0	1/1:30,0:30:83.33:1047,83,0	1/1:5,22:35:21.06:834,21,0	0/0:19,0:19:47.87:0,48,660	0/0:8,0:8:18.03:0,18,399	1/1:8,15:31:13.15:381,13,0	1/1:3,11:20:18.06:507,18,0	1/1:2,15:18:12.04:435,12,0	0/0:13,0:12:30.02:0,30,500	0/0:17,0:17:25.93:0,26,712	0/0:39,0:39:99:0,102,1995	1/1:5,13:20:8.11:793,8,0	0/1:7,0:11:1.83:274,0,2	1/1:6,0:13:5.98:136,6,0	1/1:35,0:35:30.25:250,30,0	0/0:14,0:14:27.42:0,27,342	1/1:6,9:15:6.02:237,6,0	1/1:7,27:43:5.14:167,5,0	1/1:4,21:34:18.05:636,18,0	0/0:25,0:25:74.15:0,74,1108	1/1:23,0:22:44.93:535,45,0	0/0:10,0:10:24.02:0,24,369
chr10	103536356	.	C	CAA	2639.72	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-0.769;DP=647;FS=0.000;HRun=11;HaplotypeScore=85.2724;InbreedingCoeff=0.9342;MQ=62.57;MQ0=10;MQRankSum=1.260;QD=22.18;ReadPosRankSum=-2.053;VQSLOD=2.8062;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:52:99:0,123,1208	0/0:9,0:9:18.01:0,18,174	0/0:9,0:5:0.83:0,1,2	0/0:4,0:3:7.55:0,8,55	0/0:20,0:22:44.24:0,44,385	0/0:19,0:21:35.88:0,36,448	0/0:31,0:33:74.71:0,75,752	1/1:7,10:19:28.62:353,29,0	0/0:18,0:22:35.40:0,35,414	0/0:35,0:36:51.66:0,52,675	0/0:8,0:8:15:0,15,145	0/0:25,0:27:53.70:0,54,556	0/0:25,0:25:56.69:0,57,523	0/0:20,0:22:53.47:0,53,475	0/0:16,0:16:31.23:0,31,294	0/0:23,0:23:60.02:0,60,576	0/0:36,0:39:86.70:0,87,868	0/0:17,0:16:39.02:0,39,370	1/1:5,10:19:40.05:445,40,0	1/1:6,15:22:44.64:601,45,0	1/1:5,20:30:58.14:729,58,0	0/0:28,0:29:59.97:0,60,630	0/0:20,0:22:32.05:0,32,418	0/0:33,0:34:83.71:0,84,854	0/0:15,0:16:35.99:0,36,399	0/0:30,0:30:66.01:0,66,636	1/1:4,19:28:50.49:685,50,0	0/0:7,0:7:11.98:0,12,116
chr10	103537437	.	C	CGTGTGT	2897.12	PASS	AB=1.000;AC=33;AF=0.660;AN=50;BaseQRankSum=1.955;DP=751;FS=0.000;HRun=0;HaplotypeScore=205.7271;InbreedingCoeff=0.6515;MQ=63.70;MQ0=12;MQRankSum=-4.572;QD=5.85;ReadPosRankSum=-1.726;VQSLOD=2.2866;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:36:2.58:25,3,0	./.	./.	./.	0/0:14,0:15:12.04:0,12,209	1/1:30,0:29:3.01:91,3,0	1/1:39,0:38:12.93:266,13,0	1/1:22,0:22:12.60:120,13,0	1/1:39,0:38:14.83:298,15,0	0/0:30,0:32:29.16:0,29,465	0/0:13,0:13:6.02:0,6,122	1/1:26,0:25:5.93:148,6,0	1/1:31,0:31:23.59:485,24,0	1/1:28,0:27:15.02:299,15,0	0/0:27,0:33:33.99:0,34,633	0/0:19,0:19:26.83:0,27,534	0/0:25,0:26:39.13:0,39,755	1/1:15,0:14:15.05:317,15,0	1/1:20,0:19:10.57:133,11,0	1/1:25,1:26:9.01:163,9,0	1/1:43,1:55:1.37:40,1,0	0/0:22,0:25:6:0,6,82	1/1:15,0:14:5.84:127,6,0	1/1:51,0:48:8.64:148,9,0	1/1:19,0:19:3.01:51,3,0	0/1:20,0:22:37.57:38,0,192	1/1:8,7:18:12.04:328,12,0	0/0:5,0:6:6.02:0,6,103
chr10	103539382	.	T	TCACACA	3859.79	PASS	AB=0.986;AC=26;AF=0.481;AN=54;BaseQRankSum=-3.322;DP=620;FS=0.619;HRun=0;HaplotypeScore=138.4096;InbreedingCoeff=0.6802;MQ=66.95;MQ0=19;MQRankSum=-4.061;QD=11.77;ReadPosRankSum=-2.969;VQSLOD=2.3568;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:28:2.14:37,2,0	1/1:10,0:10:12.02:263,12,0	./.	0/1:38,0:22:0:1,0,0	0/0:16,0:18:12.04:0,12,201	1/1:11,8:20:9.50:290,10,0	1/1:11,6:22:12.04:385,12,0	0/0:22,0:26:1.92:0,2,12	1/1:7,8:17:18.06:521,18,0	0/0:28,0:29:23.54:0,24,505	0/0:24,0:27:24.03:0,24,388	1/1:11,7:26:30.10:829,30,0	1/1:9,3:15:12.04:269,12,0	1/1:21,0:21:20.92:424,21,0	0/0:24,0:25:27.08:0,27,509	0/0:12,0:13:4.28:0,4,385	0/1:30,0:36:56.45:56,0,789	1/1:8,1:20:15.05:291,15,0	0/0:12,0:13:3.01:0,3,42	0/0:15,0:24:12.04:0,12,167	0/0:16,0:18:6:0,6,84	0/0:14,0:19:27.09:0,27,488	1/1:14,0:13:21.03:285,21,0	1/1:23,1:31:5.07:173,5,0	1/1:17,5:25:2.15:37,2,0	0/0:16,0:16:9.03:0,9,169	0/0:5,0:16:33.11:0,33,459	0/0:7,0:7:6.02:0,6,121
chr10	103539634	.	G	GGT	9431.45	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=1.312;DP=1084;FS=0.292;HRun=0;HaplotypeScore=151.6498;InbreedingCoeff=0.9997;MQ=71.52;MQ0=3;MQRankSum=1.910;QD=37.28;ReadPosRankSum=-0.098;VQSLOD=5.7856;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:66:99:0,147,1839	0/0:9,0:9:27.07:0,27,330	0/0:52,0:42:96.28:0,96,1186	0/0:36,0:27:45.18:0,45,719	0/0:20,0:20:42.12:0,42,521	0/0:19,0:18:51.16:0,51,649	0/0:36,0:36:87.28:0,87,1107	1/1:11,38:50:99:1918,120,0	0/0:53,0:53:99:0,132,1666	0/0:50,0:50:99:0,129,1642	0/0:24,0:24:56.74:0,57,724	0/0:51,0:51:99:0,115,1438	0/0:41,0:41:96.30:0,96,1209	0/0:43,0:43:99:0,114,1437	0/0:48,0:49:99:0,141,1770	0/0:53,0:53:99:0,135,1693	0/0:36,0:36:87.28:0,87,1107	0/0:22,0:22:54.17:0,54,687	1/1:8,15:20:45.14:711,45,0	1/1:3,24:27:63.21:1030,63,0	1/1:13,116:128:99:4821,257,0	0/0:33,0:34:93.12:0,93,1147	0/0:26,0:26:72.23:0,72,917	0/0:40,0:40:99:0,111,1385	0/0:17,0:17:42.11:0,42,518	0/0:39,0:39:99:0,108,1362	1/1:2,21:24:57.19:952,57,0	0/0:15,0:15:31.91:0,32,386
chr10	103539811	.	CGTGTGT	C	10219.92	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=13.924;DP=1032;FS=2.435;HRun=0;HaplotypeScore=272.9837;InbreedingCoeff=0.9559;MQ=53.07;MQ0=8;MQRankSum=-15.617;QD=23.82;ReadPosRankSum=3.240;VQSLOD=4.5252;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,34:58:1.46:792,1,0	1/1:8,13:21:32.98:705,33,0	0/0:54,0:27:33.11:0,33,823	0/0:44,0:30:50.99:0,51,1359	0/0:32,0:33:72.08:0,72,1992	1/1:6,22:28:39.13:802,39,0	1/1:9,18:28:27.09:577,27,0	0/0:33,0:32:36.11:0,36,900	1/1:6,34:41:60.20:1258,60,0	0/0:47,0:49:99:0,111,3269	0/0:27,0:27:57.16:0,57,1603	1/1:13,41:53:86.72:1856,87,0	1/1:8,33:41:69.23:1440,69,0	1/1:11,36:47:42.14:897,42,0	0/0:50,0:54:99:0,138,4172	0/0:41,0:44:99:0,117,3565	0/0:38,0:39:93.30:0,93,2827	1/1:6,7:14:21.07:427,21,0	0/0:15,0:15:33.10:0,33,792	0/0:23,0:26:9.02:0,9,201	0/0:44,0:43:21.04:0,21,399	0/0:38,0:40:96.33:0,96,2977	1/1:7,20:27:14.92:320,15,0	1/1:17,26:42:16.26:383,16,0	1/1:6,21:27:36.12:763,36,0	0/0:43,0:44:99:0,99,2831	0/0:22,0:29:32.83:0,33,677	0/0:25,0:27:66.21:0,66,1837
chr10	103540191	.	GTGCATGCA	G	4258.39	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=10.726;DP=699;FS=36.094;HRun=0;HaplotypeScore=177.0718;InbreedingCoeff=0.9473;MQ=56.64;MQ0=3;MQRankSum=-8.345;QD=29.17;ReadPosRankSum=-3.654;VQSLOD=2.3201;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:72.25:0,72,2932	0/0:13,0:13:30.10:0,30,1149	0/1:10,0:6:0:0,0,0	./.	0/0:20,0:20:51.18:0,51,1960	0/0:17,0:17:42.14:0,42,1487	0/0:25,0:25:45.15:0,45,1755	1/1:25,12:37:33.06:648,33,0	0/0:17,0:17:39.13:0,39,1628	0/0:43,0:44:99:0,108,4226	0/0:27,0:27:69.20:0,69,2566	0/0:29,0:29:63.22:0,63,2562	0/0:41,0:41:84.29:0,84,3303	0/0:24,0:24:42.14:0,42,1679	0/0:33,0:33:81.28:0,81,3015	0/0:21,0:21:51.18:0,51,1896	0/0:17,0:17:33.11:0,33,1262	0/0:21,0:21:37.94:0,38,1463	1/1:8,8:14:24.08:561,24,0	1/1:7,14:22:42.14:1068,42,0	1/1:16,4:20:9.03:185,9,0	0/0:28,0:28:75.25:0,75,2884	0/0:20,0:19:42.14:0,42,1493	0/0:25,0:25:51.18:0,51,1997	0/0:27,0:28:54.17:0,54,2020	0/0:39,0:40:99:0,102,3925	1/1:21,19:40:72.25:1796,72,0	0/0:18,0:18:45.13:0,45,1539
chr10	103540273	.	G	GTA	13109.67	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-6.333;DP=755;FS=1.662;HRun=0;HaplotypeScore=119.1287;InbreedingCoeff=0.9925;MQ=68.97;MQ0=6;MQRankSum=-1.883;QD=30.63;ReadPosRankSum=2.351;VQSLOD=6.8392;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,33:35:78.27:1326,78,0	1/1:2,9:11:27.09:459,27,0	0/0:17,0:14:20.36:0,20,305	0/0:24,0:23:26.07:0,26,315	0/0:20,0:20:54.18:0,54,702	1/1:2,19:22:54.18:918,54,0	1/1:0,12:12:36.12:612,36,0	1/1:42,0:41:10.28:482,10,0	1/1:2,28:30:69.24:1174,69,0	0/0:56,0:56:99:0,153,1978	0/0:28,0:28:66.21:0,66,857	1/1:5,26:31:66.23:1120,66,0	1/1:4,28:32:69.23:1157,69,0	1/1:2,25:27:66.23:1123,66,0	0/0:43,0:43:99:0,114,1452	0/0:30,0:30:87.28:0,87,1131	0/0:20,0:20:54.16:0,54,688	1/1:3,24:26:63.22:1071,63,0	1/1:18,0:18:38.85:300,39,0	1/1:24,0:24:38.85:300,39,0	1/1:17,0:17:38.85:300,39,0	0/0:24,0:24:69.21:0,69,881	1/1:3,20:21:48.16:816,48,0	1/1:2,15:16:39.13:663,39,0	1/1:1,17:18:36.12:612,36,0	0/0:40,0:40:99:0,105,1366	1/1:40,0:40:89.15:676,89,0	0/0:23,0:25:55.94:0,56,829
chr10	103540276	.	T	TATAC	9085.77	PASS	AB=0.997;AC=26;AF=0.464;AN=56;BaseQRankSum=6.088;DP=776;FS=4.577;HRun=0;HaplotypeScore=166.3954;InbreedingCoeff=0.4481;MQ=69.39;MQ0=6;MQRankSum=-1.063;QD=19.17;ReadPosRankSum=3.823;VQSLOD=4.5604;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:36:27.28:112,27,0	0/1:12,0:12:1.62:27,0,2	0/0:17,0:15:15.88:0,16,441	0/0:26,0:25:48.63:0,49,530	0/0:21,0:21:63.16:0,63,1077	0/1:22,0:22:9.21:54,0,9	0/1:13,0:13:0.14:37,0,0	1/1:2,36:42:99:2527,123,0	0/1:30,0:31:1.11:71,0,1	0/0:56,0:56:99:0,160,2947	0/0:25,0:25:69.22:0,69,1260	0/1:32,0:31:4.75:66,0,5	0/1:32,0:32:33.90:62,0,34	0/1:29,0:29:24.88:65,0,25	0/0:43,0:43:99:0,120,2195	0/0:30,0:30:90.29:0,90,1659	0/0:20,0:20:57.18:0,57,1027	0/1:26,0:25:1.77:65,0,2	1/1:1,18:22:63.13:1329,63,0	1/1:8,18:28:39.13:1052,39,0	1/1:1,17:22:39.13:1050,39,0	0/0:24,0:24:72.23:0,72,1309	1/1:22,0:20:7.28:59,7,0	1/1:19,0:18:23.62:67,24,0	0/1:20,0:20:20.11:34,0,20	0/0:39,0:39:99:0,111,2045	1/1:8,29:39:90.31:2405,90,0	0/1:25,0:25:2.57:3,0,1183
chr10	103543069	.	CT	C	5008.63	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=2.533;DP=461;FS=3.804;HRun=8;HaplotypeScore=64.8360;InbreedingCoeff=0.9791;MQ=71.43;MQ0=0;MQRankSum=2.792;QD=24.31;ReadPosRankSum=3.211;VQSLOD=5.7558;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:37:99:956,99,0	1/1:0,5:5:15.02:145,15,0	0/0:10,0:8:9.78:0,10,68	0/0:7,0:6:10.66:0,11,60	0/0:18,0:18:50.91:0,51,558	1/1:0,15:15:42.07:405,42,0	1/1:3,19:22:54.08:521,54,0	0/0:3,0:20:49.40:0,49,263	1/1:2,16:18:39.06:374,39,0	0/0:25,0:25:66.16:0,66,745	0/0:12,0:12:30.08:0,30,352	1/1:0,25:25:66.11:637,66,0	1/1:0,18:18:42.07:405,42,0	1/1:2,12:14:36.05:348,36,0	0/0:17,0:17:51.14:0,51,602	0/0:7,0:7:21.04:0,21,230	0/0:24,0:24:66.19:0,66,784	1/1:0,14:14:33.05:319,33,0	0/0:10,0:20:44.06:0,44,258	0/0:3,0:21:54.57:0,55,295	0/0:2,0:7:11.63:0,12,65	0/0:17,0:17:45.03:0,45,503	1/1:1,12:13:33.05:319,33,0	1/1:2,8:10:21.03:203,21,0	1/1:1,14:15:39.06:377,39,0	0/0:16,0:16:42.12:0,42,496	0/0:5,0:20:46.19:0,46,250	0/0:14,0:14:42.13:0,42,507
chr10	103543913	.	G	GGT	5765.02	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=4.952;DP=740;FS=1.649;HRun=0;HaplotypeScore=147.9456;InbreedingCoeff=0.6346;MQ=59.18;MQ0=28;MQRankSum=-3.752;QD=18.13;ReadPosRankSum=3.768;VQSLOD=5.2637;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,1:29:9.73:405,10,0	1/1:15,0:15:41.78:494,42,0	0/0:50,0:25:35.87:0,36,323	0/0:47,0:14:14.90:0,15,113	0/0:17,0:20:16.30:0,16,380	1/1:15,0:15:0.87:439,1,0	0/1:26,0:26:31.02:428,0,31	0/0:27,0:25:27.55:0,28,321	1/1:32,0:30:69.87:927,70,0	0/0:26,0:26:51.14:0,51,595	0/0:17,0:18:33.10:0,33,390	1/1:23,0:23:42.32:449,42,0	1/1:21,0:21:50.87:610,51,0	1/1:25,0:24:39.32:452,39,0	0/0:27,0:27:50.84:0,51,575	0/0:22,0:21:27.76:0,28,463	0/0:27,0:27:48.59:0,49,549	0/1:23,0:23:67.74:309,0,68	0/0:20,0:19:36.02:0,36,403	0/0:18,0:18:35.75:0,36,347	0/0:61,0:57:89.39:0,89,1013	0/0:20,0:20:40.34:0,40,446	1/1:21,0:21:29.90:361,30,0	1/1:32,3:33:6.71:493,7,0	1/1:20,0:17:5.83:358,6,0	0/0:39,0:38:88.47:0,88,944	0/1:22,0:22:15.78:16,0,258	0/1:10,0:9:24.81:25,0,169
chr10	103543931	.	TG	T	1883.60	PASS	AB=0.837;AC=21;AF=0.375;AN=56;BaseQRankSum=14.221;DP=774;FS=4.674;HRun=2;HaplotypeScore=157.2524;InbreedingCoeff=0.3709;MQ=49.75;MQ0=44;MQRankSum=-3.477;QD=5.44;ReadPosRankSum=2.836;VQSLOD=0.9203;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:26,9:32:5.77:138,6,0	1/1:9,5:14:29.32:167,29,0	0/0:40,0:15:35.36:0,35,411	0/0:38,0:6:15.51:0,16,159	0/0:24,0:24:46.92:0,47,593	0/1:12,4:16:10.16:120,0,10	0/1:21,7:28:43.28:183,0,43	0/0:21,1:18:51.10:0,51,617	1/1:26,9:31:17.08:227,17,0	0/0:29,1:29:66.88:0,67,880	0/0:18,0:18:39.13:0,39,550	1/1:10,11:21:32.79:251,33,0	1/1:17,8:23:10.68:154,11,0	0/1:18,8:23:12.80:211,0,13	0/0:30,0:30:63.79:0,64,807	0/0:23,1:23:25.69:0,26,591	0/0:36,0:36:2.83:0,3,905	0/1:14,9:22:99:226,0,132	0/1:21,0:20:23.75:24,0,454	0/0:22,0:22:0.96:0,1,232	0/0:52,2:45:81.83:0,82,1114	0/0:26,0:26:58.72:0,59,780	1/1:10,10:20:21.49:128,21,0	0/1:28,8:33:28.63:123,0,29	1/1:17,7:21:6.56:107,7,0	0/0:47,0:45:99:0,123,1485	0/1:21,1:22:13.75:14,0,207	0/0:15,2:16:5.46:0,5,351
chr10	103543932	.	GGTGTGTGT	G	3225.28	PASS	AB=0.933;AC=30;AF=0.577;AN=52;BaseQRankSum=10.275;DP=773;FS=5.196;HRun=0;HaplotypeScore=230.4993;InbreedingCoeff=0.4342;MQ=49.63;MQ0=44;MQRankSum=-8.337;QD=6.88;ReadPosRankSum=4.469;VQSLOD=2.2101;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:33:23.87:128,0,24	1/1:15,0:15:15.52:262,16,0	./.	./.	0/0:23,0:23:41.81:0,42,1118	1/1:16,0:16:3.95:30,4,0	1/1:24,0:25:0.88:55,1,0	1/1:22,0:18:2.89:16,3,0	0/1:35,0:32:3.64:280,0,4	0/0:23,0:29:45.92:0,46,991	0/0:15,0:18:26.93:0,27,979	1/1:21,0:21:3.91:266,4,0	1/1:26,0:24:9.04:258,9,0	1/1:26,0:23:15.30:201,15,0	0/0:30,0:30:57.61:0,58,1368	0/1:21,0:21:9.61:10,0,1096	0/0:34,0:36:57.36:0,57,1717	1/1:24,0:24:9.86:261,10,0	0/1:15,6:20:14.78:278,0,15	1/1:9,13:22:20.99:418,21,0	0/1:52,0:45:5.73:117,0,6	0/0:25,0:26:39.10:0,39,1136	1/1:20,0:20:5.15:152,5,0	0/1:37,0:34:99:119,0,101	1/1:20,0:21:12.30:188,12,0	0/0:47,0:45:60.66:0,61,1687	1/1:9,12:21:18.02:368,18,0	0/0:16,0:15:29.99:0,30,771
chr10	103543935	.	GTGTGTGTGT	G	4689.63	PASS	AB=0.939;AC=22;AF=0.393;AN=56;BaseQRankSum=14.608;DP=773;FS=12.361;HRun=0;HaplotypeScore=231.9424;InbreedingCoeff=0.2827;MQ=48.10;MQ0=53;MQRankSum=-3.514;QD=11.96;ReadPosRankSum=3.561;VQSLOD=1.7451;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,3:32:16.56:260,0,17	1/1:10,4:15:33.69:500,34,0	0/0:38,0:12:30.04:0,30,338	0/0:36,0:4:12.04:0,12,151	0/0:24,0:23:51.81:0,52,1747	0/1:14,1:15:5.15:140,0,5	0/1:23,1:25:51.33:211,0,51	0/0:23,0:18:46.36:0,46,606	1/1:31,4:33:13.47:554,13,0	0/0:31,0:30:90.27:0,90,2068	0/0:18,0:18:39.13:0,39,1399	1/1:12,5:20:22.36:444,22,0	1/1:21,2:23:21.53:498,22,0	0/1:21,4:21:9.24:385,0,9	0/0:30,0:30:81.71:0,82,2191	0/1:21,0:20:8.36:8,0,1613	0/0:37,0:37:93.05:0,93,2744	0/1:20,4:23:99:458,0,127	0/1:20,0:19:16.88:17,0,485	0/1:22,0:21:99:100,0,234	0/0:55,0:44:72.16:0,72,1006	0/0:27,0:27:66.22:0,66,1939	1/1:15,4:20:29.94:349,30,0	0/1:35,3:35:99:282,0,171	1/1:22,4:21:23.64:367,24,0	0/0:47,0:45:99:0,129,3160	0/1:21,0:21:99:116,0,201	0/0:13,0:13:28.44:0,28,1092
chr10	103544525	.	TG	T	2542.14	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.886;DP=585;FS=3.714;HRun=8;HaplotypeScore=59.8935;InbreedingCoeff=0.9887;MQ=83.90;MQ0=0;MQRankSum=-0.938;QD=20.84;ReadPosRankSum=-0.670;VQSLOD=3.5835;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,1184	0/0:5,0:5:12.04:0,12,145	0/0:18,0:18:47.80:0,48,526	0/0:16,1:17:15.01:0,15,367	0/0:18,0:18:51.14:0,51,603	0/0:19,0:19:42.11:0,42,494	0/0:27,0:27:72.21:0,72,858	1/1:4,19:23:54.06:516,54,0	0/0:23,0:23:63.16:0,63,745	0/0:25,0:25:63.19:0,63,760	0/0:20,0:20:60.15:0,60,681	0/0:22,0:22:63.14:0,63,735	0/0:21,0:21:57.13:0,57,662	0/0:19,0:19:54.17:0,54,652	0/0:18,0:18:51.16:0,51,616	0/0:28,0:28:81.22:0,81,946	0/0:26,0:26:78.23:0,78,932	0/0:8,0:8:24.07:0,24,290	1/1:6,17:23:51.07:492,51,0	1/1:1,19:20:48.08:464,48,0	1/1:6,29:35:78.12:753,78,0	0/0:14,0:14:39.08:0,39,445	0/0:15,0:15:42.10:0,42,484	0/0:22,0:22:54.11:0,54,624	0/0:20,0:20:57.16:0,57,677	0/0:24,0:24:60.17:0,60,714	1/1:3,18:21:51.08:493,51,0	0/0:18,0:18:45.13:0,45,532
chr10	103547623	.	TTAC	T	469.54	PASS	AB=0.778;AC=5;AF=0.089;AN=56;BaseQRankSum=5.749;DP=681;FS=24.803;HRun=0;HaplotypeScore=260.9501;InbreedingCoeff=-0.1072;MQ=86.52;MQ0=0;MQRankSum=-4.354;QD=3.56;ReadPosRankSum=1.732;VQSLOD=1.2317;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:44.96:0,45,850	0/1:7,8:15:99:171,0,415	0/0:32,0:32:90.71:0,91,1878	0/0:37,0:36:99:0,100,2156	0/0:22,4:26:58.46:0,58,1032	0/0:27,1:28:36.81:0,37,1594	0/0:26,0:26:72.16:0,72,1549	0/0:22,0:22:27.89:0,28,963	0/0:20,0:20:60.05:0,60,1327	0/1:37,5:41:89.60:90,0,2367	0/0:14,6:20:3.94:0,4,573	0/0:27,0:27:77.95:0,78,1576	0/0:41,0:41:99:0,117,2420	0/0:29,0:29:87.16:0,87,1836	0/0:23,0:23:63.02:0,63,1234	0/0:28,0:28:81.17:0,81,1776	0/0:19,0:19:53.92:0,54,1133	0/0:9,0:9:27.09:0,27,615	0/0:13,0:12:29.04:0,29,583	0/1:14,9:23:38.45:38,0,412	0/0:7,0:7:8.89:0,9,88	0/0:34,10:44:73.66:0,74,1843	0/0:18,5:23:22.41:0,22,954	0/0:13,0:13:27.09:0,27,631	0/0:29,8:37:23.84:0,24,1419	0/1:35,3:37:49.34:49,0,2200	0/0:9,0:9:27.08:0,27,470	0/1:8,6:14:99:239,0,446
chr10	103547655	.	AGGGG	A	9863	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.299;DP=355;FS=147.728;HRun=4;HaplotypeScore=186.0511;InbreedingCoeff=0.7382;MQ=105.08;MQ0=0;MQRankSum=-10.619;QD=33.21;ReadPosRankSum=6.771;VQSLOD=0.7844;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:6:18.04:211,18,0	1/1:0,2:2:6.02:76,6,0	0/0:23,0:23:36.92:0,37,437	0/0:32,1:35:9.31:0,9,684	1/1:2,14:16:41.99:491,42,0	1/1:0,13:13:39.12:468,39,0	1/1:2,10:12:33.09:394,33,0	1/1:0,9:8:24.08:354,24,0	1/1:1,14:15:39.12:455,39,0	1/1:3,12:15:45.13:637,45,0	1/1:0,9:9:24.02:250,24,0	1/1:2,13:15:42.08:474,42,0	1/1:4,22:26:75.16:852,75,0	1/1:1,19:20:60.18:748,60,0	1/1:1,12:13:36.10:411,36,0	1/1:1,14:15:42.13:497,42,0	1/1:4,6:10:21.02:242,21,0	1/1:1,2:3:4.62:99,5,0	1/1:0,5:4:12.04:171,12,0	1/1:0,8:8:21.06:242,21,0	1/1:0,3:3:6.49:79,6,0	1/1:4,19:23:69.16:836,69,0	1/1:0,9:9:24.06:263,24,0	1/1:2,4:6:3.01:35,3,0	1/1:1,13:14:42.07:475,42,0	1/1:1,12:13:39.13:526,39,0	1/1:0,8:8:24.07:276,24,0	1/1:2,7:9:27.02:303,27,0
chr10	103547659	.	GC	G	4581.54	PASS	AB=0.931;AC=54;AF=0.964;AN=56;BaseQRankSum=3.273;DP=349;FS=74.089;HRun=2;HaplotypeScore=187.8380;InbreedingCoeff=-0.0604;MQ=103.55;MQ0=0;MQRankSum=-3.150;QD=13.13;ReadPosRankSum=5.299;VQSLOD=1.4553;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:9.78:70,10,0	1/1:2,0:2:5.88:36,6,0	0/1:21,2:23:26.78:135,0,27	0/1:31,2:33:35.43:172,0,35	1/1:14,0:14:28.69:181,29,0	1/1:13,0:13:38.41:245,38,0	1/1:11,0:11:17.05:138,17,0	1/1:9,0:8:23.34:132,23,0	1/1:16,0:16:1.75:188,2,0	1/1:14,0:14:35.12:206,35,0	1/1:10,0:10:23.68:154,24,0	1/1:15,0:15:21.57:226,22,0	1/1:24,0:24:62.09:398,62,0	1/1:21,0:21:51.12:374,51,0	1/1:13,0:13:32.99:209,33,0	1/1:15,0:15:35.46:227,35,0	1/1:8,0:8:11.06:71,11,0	1/1:2,0:2:1.21:14,1,0	1/1:5,0:4:11.70:68,12,0	1/1:10,0:10:20.71:134,21,0	1/1:4,0:4:5.86:36,6,0	1/1:21,0:21:56.30:371,56,0	1/1:9,0:9:21.62:139,22,0	1/1:5,0:5:2.97:20,3,0	1/1:14,0:14:32.53:211,33,0	1/1:16,0:16:15.81:190,16,0	1/1:8,0:8:23.60:148,24,0	1/1:7,0:7:14:90,14,0
chr10	103547662	.	A	ACCG	10601.06	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-1.311;DP=356;FS=112.875;HRun=0;HaplotypeScore=177.0306;InbreedingCoeff=0.6072;MQ=99.25;MQ0=0;MQRankSum=-9.275;QD=32.52;ReadPosRankSum=6.298;VQSLOD=1.9238;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,6:8:18.06:289,18,0	1/1:0,2:2:6.02:86,6,0	0/1:22,0:22:1.02:1,0,249	0/0:30,0:30:62.18:0,62,382	1/1:2,13:16:36.59:527,37,0	1/1:0,13:13:39.13:527,39,0	1/1:0,10:10:30.10:437,30,0	1/1:1,9:9:24.08:378,24,0	1/1:4,14:18:45:577,45,0	1/1:2,12:14:36.12:532,36,0	1/1:1,9:10:24.06:289,24,0	1/1:3,13:16:45.05:558,45,0	1/1:2,22:24:66.22:883,66,0	1/1:3,17:22:57.19:744,57,0	1/1:0,12:12:36.12:495,36,0	1/1:1,14:15:42.14:610,42,0	1/1:2,6:8:17.89:239,18,0	1/1:0,2:2:5.93:63,6,0	1/1:1,5:5:12.04:180,12,0	1/1:2,8:10:21.07:274,21,0	1/1:2,3:5:5.71:76,6,0	1/1:2,19:21:57.18:725,57,0	1/1:0,8:8:24.08:325,24,0	1/1:3,4:7:3.01:40,3,0	1/1:1,13:14:39.10:548,39,0	1/1:4,12:16:39.12:534,39,0	1/1:2,8:10:24.08:316,24,0	1/1:0,7:7:21.07:350,21,0
chr10	103547855	.	CACA	C	1788.91	PASS	AB=0.715;AC=4;AF=0.071;AN=56;BaseQRankSum=9.149;DP=1177;FS=0.000;HRun=0;HaplotypeScore=181.1522;InbreedingCoeff=-0.0769;MQ=56.08;MQ0=13;MQRankSum=-4.027;QD=8.40;ReadPosRankSum=-1.472;VQSLOD=2.9533;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,3047	0/0:19,0:19:54.18:0,54,1120	0/0:33,0:18:54.05:0,54,1119	0/0:39,0:19:57.16:0,57,1124	0/0:32,0:32:87.17:0,87,1806	0/0:32,0:32:84.27:0,84,1875	0/0:40,0:40:99:0,114,2395	0/0:44,0:40:99:0,117,2459	0/0:57,0:57:99:0,169,3567	0/0:39,0:38:99:0,114,2400	0/0:18,0:18:48.16:0,48,1034	0/0:61,0:61:99:0,181,3787	0/0:67,0:67:99:0,199,4116	0/0:55,0:55:99:0,162,3448	0/0:55,0:55:99:0,166,3577	0/0:50,0:50:99:0,144,2972	0/0:38,0:38:99:0,114,2312	0/0:28,0:28:78.14:0,78,1624	0/1:21,7:26:99:249,0,959	0/1:31,14:45:99:539,0,1668	0/1:55,52:104:99:562,0,2979	0/0:47,0:47:99:0,135,2799	0/0:27,0:26:78.17:0,78,1588	0/0:57,0:57:99:0,118,3375	0/0:35,0:35:99:0,99,1976	0/0:32,0:31:93.23:0,93,2003	0/1:14,18:32:99:550,0,711	0/0:12,0:12:36.12:0,36,829
chr10	103549279	.	GA	G	1802.62	PASS	AB=0.917;AC=11;AF=0.196;AN=56;BaseQRankSum=-0.459;DP=450;FS=0.491;HRun=9;HaplotypeScore=84.2815;InbreedingCoeff=0.9292;MQ=76.47;MQ0=0;MQRankSum=-2.658;QD=18.78;ReadPosRankSum=-0.018;VQSLOD=3.5860;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,1147	0/0:5,0:5:15.04:0,15,173	0/0:15,0:15:21.05:0,21,229	0/0:15,0:17:36.10:0,36,403	0/0:9,0:9:27.06:0,27,300	0/0:15,0:15:45.06:0,45,491	0/0:21,0:21:51.15:0,51,589	1/1:2,22:24:63.03:577,63,0	0/0:23,0:23:63.02:0,63,668	0/0:12,0:12:33.08:0,33,371	0/0:11,0:11:27.08:0,27,312	0/0:13,0:13:36.07:0,36,400	0/0:15,0:15:39.11:0,39,446	0/0:15,0:15:42.08:0,42,469	0/0:24,0:24:66.10:0,66,723	0/0:18,0:18:51.04:0,51,545	0/0:18,0:18:45.09:0,45,496	0/0:10,0:10:27.08:0,27,312	1/1:5,19:23:57.02:522,57,0	1/1:2,12:14:33.01:302,33,0	1/1:0,10:10:27.01:247,27,0	0/0:17,0:17:45.06:0,45,490	0/0:17,0:17:42.09:0,42,471	0/0:16,0:16:42.89:0,43,442	0/1:10,1:11:0.53:1,0,195	0/0:19,0:19:45.12:0,45,510	1/1:2,11:13:36.02:329,36,0	0/0:7,0:7:15.04:0,15,173
chr10	103549683	.	TA	T	2282.08	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.468;DP=624;FS=1.750;HRun=10;HaplotypeScore=69.7523;InbreedingCoeff=0.9834;MQ=75.49;MQ0=0;MQRankSum=-2.586;QD=19.18;ReadPosRankSum=-0.298;VQSLOD=4.3634;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:57.13:0,57,620	0/0:17,0:17:45.10:0,45,486	0/0:14,0:14:21.05:0,21,224	0/0:15,0:15:24.11:0,24,272	0/0:22,1:23:11.34:0,11,560	0/0:22,1:23:34.10:0,34,597	0/0:13,3:16:13.04:0,13,364	1/1:5,21:26:32.77:506,33,0	0/0:21,0:21:54.15:0,54,597	0/0:38,0:38:99:0,99,1095	0/0:25,1:26:46.20:0,46,721	0/0:21,0:21:54.15:0,54,597	0/0:23,1:24:37.11:0,37,631	0/0:13,0:13:39.10:0,39,424	0/0:23,0:23:60.16:0,60,664	0/0:24,0:24:60.16:0,60,664	0/0:17,1:17:22.06:0,22,462	0/0:9,0:9:27.04:0,27,286	1/1:2,22:24:65.93:559,66,0	1/1:8,22:30:38.77:559,39,0	1/1:2,13:15:38.99:339,39,0	0/0:27,2:29:33.94:0,34,814	0/0:29,0:30:72.02:0,72,770	0/0:12,0:12:36.06:0,36,385	0/0:29,0:29:66.22:0,66,788	0/0:34,1:36:54.98:0,55,804	1/1:4,20:24:56.97:495,57,0	0/0:18,0:20:44.92:0,45,460
chr10	103549915	.	GCACACATGCACA	G	3215.58	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.842;DP=1087;FS=9.947;HRun=0;HaplotypeScore=361.1967;InbreedingCoeff=0.8963;MQ=57.40;MQ0=17;MQRankSum=-6.751;QD=31.22;ReadPosRankSum=-4.493;VQSLOD=1.3237;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:63:99:0,154,6841	0/0:14,0:14:39.13:0,39,1761	0/0:58,0:12:26.92:0,27,601	0/0:58,0:21:15.98:0,16,578	0/0:31,0:31:81.28:0,81,3936	0/0:18,0:18:48.15:0,48,2086	0/0:51,0:51:99:0,106,4071	1/1:15,21:35:50.25:1496,50,0	0/0:46,0:46:99:0,114,4961	0/0:60,0:59:99:0,153,7231	0/0:21,0:21:41.99:0,42,2006	0/0:42,0:42:99:0,111,4473	0/0:46,0:46:99:0,126,5476	0/0:37,0:37:93.32:0,93,4334	0/0:53,0:53:99:0,129,6471	0/0:42,0:42:99:0,105,5196	0/0:26,0:26:73.13:0,73,3802	0/0:25,0:25:72.21:0,72,2930	1/1:7,8:13:27.08:815,27,0	1/1:7,21:28:2.74:100,3,0	0/0:23,64:87:3.01:0,3,50	0/0:23,0:23:60.21:0,60,2937	0/0:25,0:25:66.21:0,66,2787	0/0:52,0:52:99:0,126,5682	0/0:30,0:30:84.29:0,84,3669	0/0:59,0:59:99:0,162,7551	1/1:5,19:24:26.18:955,26,0	0/0:16,0:16:45.15:0,45,2581
chr10	103549921	.	ATG	A	341.20	PASS	AB=0.875;AC=3;AF=0.054;AN=56;BaseQRankSum=10.333;DP=1061;FS=11.704;HRun=0;HaplotypeScore=187.4605;InbreedingCoeff=-0.0724;MQ=58.10;MQ0=15;MQRankSum=-8.959;QD=4.94;ReadPosRankSum=-1.751;VQSLOD=2.1279;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:70,0:69:99:0,178,3374	0/0:14,0:14:42.14:0,42,838	0/0:53,0:11:26.67:0,27,419	0/0:59,0:26:46.23:0,46,710	0/0:30,0:30:87.30:0,87,1721	0/0:20,0:20:57.20:0,57,1107	0/0:49,0:49:99:0,105,2507	0/1:22,11:34:99:278,0,258	0/0:44,0:44:99:0,126,2483	0/0:61,0:60:99:0,167,3328	0/0:17,0:17:51.15:0,51,927	0/0:42,0:42:99:0,123,2407	0/0:47,0:47:99:0,141,2763	0/0:37,0:37:99:0,108,2113	0/0:54,0:54:99:0,154,2978	0/0:39,0:39:99:0,114,2209	0/0:28,0:28:57.62:0,58,1543	0/0:24,0:24:68.86:0,69,1369	0/1:12,0:10:34.40:101,0,34	0/0:24,1:25:0.14:0,0,45	0/0:75,5:80:3.79:0,4,61	0/0:21,0:21:60.17:0,60,1168	0/0:25,0:25:66.22:0,66,1310	0/0:50,0:50:99:0,141,2741	0/0:28,0:28:84.29:0,84,1693	0/0:59,0:59:99:0,178,3487	0/1:20,3:23:49.91:62,0,50	0/0:15,0:15:45.15:0,45,898
chr10	103549927	.	A	ATG	737.29	PASS	AB=0.853;AC=5;AF=0.089;AN=56;BaseQRankSum=9.103;DP=1057;FS=3.243;HRun=0;HaplotypeScore=181.8452;InbreedingCoeff=0.2663;MQ=59.23;MQ0=13;MQRankSum=-5.121;QD=8.10;ReadPosRankSum=-4.218;VQSLOD=2.4779;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:69,0:68:99:0,177,2840	0/0:14,0:14:42.14:0,42,679	0/0:54,0:13:26.70:0,27,413	0/0:62,0:27:33.65:0,34,474	0/0:30,0:30:90.31:0,90,1455	0/0:22,0:22:60.16:0,60,939	0/0:51,0:51:99:0,112,2063	0/1:24,11:35:95.90:640,0,96	0/0:41,0:41:99:0,117,1891	0/0:53,0:52:99:0,151,2410	0/0:15,0:15:45.15:0,45,724	0/0:41,0:41:99:0,120,1940	0/0:48,0:48:99:0,144,2338	0/0:38,0:38:99:0,111,1757	0/0:59,0:59:99:0,163,2577	0/0:36,0:36:99:0,105,1703	0/0:30,0:30:82.83:0,83,1321	0/0:25,0:25:72.18:0,72,1109	0/1:10,0:10:5.67:150,0,6	1/1:22,1:23:2.85:24,3,0	0/0:70,4:77:3.01:0,3,49	0/0:23,0:23:66.21:0,66,1045	0/0:29,0:29:75.24:0,75,1192	0/0:47,0:47:99:0,135,2198	0/0:29,0:29:87.30:0,87,1397	0/0:56,0:56:99:0,169,2680	0/1:19,3:22:34.91:35,0,79	0/0:17,0:17:51.17:0,51,824
chr10	103550961	.	GACACACAC	G	500.88	PASS	AB=0.872;AC=13;AF=0.310;AN=42;BaseQRankSum=4.860;DP=472;FS=7.218;HRun=0;HaplotypeScore=116.9740;InbreedingCoeff=0.5157;MQ=69.84;MQ0=8;MQRankSum=-4.348;QD=3.53;ReadPosRankSum=-1.757;VQSLOD=1.3191;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:2.99:0,3,24	./.	./.	./.	./.	1/1:16,2:18:3.01:37,3,0	1/1:23,5:28:7.74:129,8,0	0/0:18,0:18:0.89:0,1,2	1/1:11,3:14:8.89:192,9,0	0/0:20,0:19:27.56:0,28,572	./.	1/1:21,1:23:5.30:126,5,0	1/1:10,0:11:3:56,3,0	0/0:17,1:18:0:0,0,0	0/0:16,0:15:11.66:0,12,342	0/0:20,0:20:18.06:0,18,376	0/0:18,0:18:21.19:0,21,717	1/1:11,2:13:2.83:63,3,0	0/0:16,0:16:4.57:0,5,85	0/0:5,0:5:3.01:0,3,42	0/0:38,0:37:24.04:0,24,562	0/0:13,0:13:9.03:0,9,169	./.	0/1:29,1:33:32.29:32,0,74	./.	0/0:11,0:10:6.02:0,6,135	0/0:7,0:7:12.93:0,13,326	0/0:6,0:6:9.03:0,9,302
chr10	103552837	.	GTGTGCA	G	1423.94	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=0.539;DP=809;FS=2.546;HRun=0;HaplotypeScore=178.6902;InbreedingCoeff=0.1621;MQ=57.41;MQ0=22;MQRankSum=-0.073;QD=3.97;ReadPosRankSum=-5.876;VQSLOD=0.8416;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:50,0:50:72.67:73,0,1007	0/0:11,0:11:21.07:0,21,445	0/0:49,0:20:4:0,4,698	0/0:41,0:15:23.05:0,23,428	0/0:16,0:15:45.15:0,45,1005	0/0:18,0:18:27.75:0,28,506	0/1:36,0:36:12.74:13,0,307	1/1:22,0:18:42.78:532,43,0	0/1:39,0:39:5.03:5,0,1345	0/0:24,0:23:58.37:0,58,1345	0/0:24,0:24:60.22:0,60,1615	0/0:26,0:26:24.04:0,24,1243	0/1:26,0:26:17.76:18,0,729	0/0:38,0:38:6.87:0,7,754	0/0:39,0:39:83.87:0,84,1872	0/0:19,0:19:57.18:0,57,1501	0/0:43,0:41:19.32:0,19,2001	0/1:29,0:28:99:99,0,732	1/1:14,0:13:31.34:422,31,0	0/1:15,0:14:21.53:251,0,22	0/1:66,0:65:27.65:28,0,28	0/1:19,0:19:6.52:7,0,500	0/0:14,0:13:23.95:0,24,409	0/0:45,0:44:39.97:0,40,1824	0/1:19,0:18:10.21:10,0,585	0/0:28,0:28:45.57:0,46,1460	1/1:3,21:24:8.69:134,9,0	0/0:15,0:15:7.05:0,7,538
chr10	103552839	.	GTGCA	G	2179.61	PASS	AB=0.995;AC=21;AF=0.375;AN=56;BaseQRankSum=2.423;DP=807;FS=9.081;HRun=0;HaplotypeScore=149.6010;InbreedingCoeff=0.0783;MQ=57.15;MQ0=22;MQRankSum=-0.040;QD=4.28;ReadPosRankSum=-5.051;VQSLOD=-0.6749;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:50,0:50:99:145,0,536	0/0:11,0:11:17.28:0,17,256	0/0:48,0:18:4:0,4,698	0/0:43,0:15:23.05:0,23,428	0/0:17,0:16:48.16:0,48,893	0/0:18,0:18:6.72:0,7,263	0/1:36,0:36:58.29:58,0,141	1/1:21,0:17:44.49:588,44,0	0/1:40,0:40:11.70:12,0,845	0/0:23,0:22:58.37:0,58,1159	0/0:24,0:24:59.73:0,60,1333	0/1:25,0:25:27.58:28,0,748	0/1:26,1:27:99:99,0,423	0/1:38,0:38:32:32,0,377	0/0:38,0:38:85.52:0,86,1559	0/0:19,0:19:57.16:0,57,1197	0/1:44,0:42:12.94:13,0,1601	0/1:30,0:29:99:153,0,374	1/1:13,0:12:33.98:469,34,0	1/1:15,0:14:6.03:323,6,0	1/1:62,3:64:13.36:186,13,0	0/1:18,0:18:20.61:21,0,420	0/0:15,0:14:3.13:0,3,200	0/1:45,1:45:84.97:85,0,1109	0/1:18,0:17:17.69:18,0,360	0/0:27,0:27:45.57:0,46,1241	1/1:22,1:23:9.02:132,9,0	0/0:15,0:15:6.58:0,7,470
chr10	103552841	.	GCA	G	3440.55	PASS	AB=0.924;AC=24;AF=0.429;AN=56;BaseQRankSum=4.373;DP=807;FS=12.007;HRun=0;HaplotypeScore=120.2179;InbreedingCoeff=-0.0601;MQ=56.71;MQ0=23;MQRankSum=0.422;QD=6.24;ReadPosRankSum=-3.520;VQSLOD=1.5279;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:47,2:49:99:272,0,181	0/1:10,1:11:56.76:57,0,101	0/0:46,2:17:4:0,4,698	0/0:44,0:12:23.05:0,23,428	0/0:18,0:17:51.11:0,51,786	0/1:15,3:18:89.10:89,0,131	0/1:29,7:36:71.98:153,0,72	1/1:4,17:17:44.60:593,45,0	0/1:40,1:41:59.67:60,0,376	0/0:22,0:21:58.36:0,58,1027	0/0:24,0:24:59.53:0,60,1118	0/1:24,2:26:84.22:84,0,369	0/1:24,3:27:99:192,0,115	0/1:31,4:35:99:132,0,175	0/0:33,4:37:85.02:0,85,1265	0/0:19,0:19:57.16:0,57,950	0/1:43,0:41:40.12:40,0,1402	0/1:28,3:30:99:267,0,145	1/1:1,13:13:39.08:531,39,0	1/1:15,0:14:25.88:349,26,0	1/1:5,57:61:15.87:178,16,0	0/1:18,0:18:15.16:15,0,465	0/1:12,3:14:68.40:68,0,99	0/1:44,4:47:99:218,0,556	0/1:18,0:17:68.46:68,0,103	0/0:29,0:29:26.50:0,26,1124	1/1:23,0:23:8.96:72,9,0	0/0:15,0:15:6.62:0,7,402
chr10	103552843	.	ATG	A	542.83	PASS	AB=0.985;AC=15;AF=0.278;AN=54;BaseQRankSum=5.318;DP=825;FS=2.618;HRun=0;HaplotypeScore=131.7805;InbreedingCoeff=-0.2706;MQ=56.17;MQ0=24;MQRankSum=-0.818;QD=1.15;ReadPosRankSum=1.496;VQSLOD=2.4397;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:48,0:49:17.78:18,0,525	0/0:12,0:12:21.63:0,22,258	./.	0/0:49,0:13:3.01:0,3,33	0/0:18,0:17:33.11:0,33,503	0/1:18,0:18:40.38:40,0,339	0/1:36,0:36:76.98:77,0,163	0/0:22,0:18:0.89:0,1,2	0/0:39,0:39:33.16:0,33,803	0/0:23,1:23:2.33:0,2,438	0/0:24,0:24:34:0,34,506	0/1:26,0:26:12.91:13,0,647	0/1:27,0:27:39.38:39,0,372	0/1:36,0:36:49.95:50,0,513	0/0:34,1:36:10.80:0,11,507	0/0:21,0:22:45.12:0,45,634	0/1:42,2:43:47.28:47,0,729	0/1:32,0:31:99:107,0,460	0/0:14,0:13:2.82:0,3,22	0/0:13,0:12:2.89:0,3,44	0/1:65,0:63:17.12:17,0,33	0/1:17,1:19:59.76:60,0,219	0/1:16,0:15:60.27:60,0,222	0/1:50,0:49:99:116,0,1192	0/0:19,0:18:26.90:0,27,390	0/1:28,1:29:14.84:15,0,333	1/1:24,0:24:7.73:33,8,0	0/0:14,0:14:17.75:0,18,198
chr10	103553981	.	AGG	A	2418.70	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=9.999;DP=443;FS=6.344;HRun=11;HaplotypeScore=72.0287;InbreedingCoeff=0.8343;MQ=71.71;MQ0=0;MQRankSum=-5.170;QD=18.19;ReadPosRankSum=7.583;VQSLOD=1.9852;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:19:25.84:0,26,315	0/0:3,0:3:3:0,3,25	0/0:9,0:7:15.05:0,15,228	0/1:14,0:14:7.70:8,0,231	0/0:6,0:7:9.02:0,9,116	0/0:14,0:15:29.51:0,30,351	0/0:17,0:19:42.03:0,42,552	1/1:7,21:28:57.05:600,57,0	0/0:12,0:14:29:0,29,314	0/0:17,0:18:31.79:0,32,385	0/0:9,0:9:12.01:0,12,142	0/0:14,0:14:29.76:0,30,370	0/0:14,0:14:17.08:0,17,232	0/0:16,0:16:38.58:0,39,514	0/0:14,0:14:35.60:0,36,494	0/0:15,0:16:37.39:0,37,445	0/0:24,0:24:54.11:0,54,738	0/0:17,0:17:39.27:0,39,560	1/1:7,12:19:32.93:351,33,0	1/1:1,13:14:35.97:357,36,0	1/1:6,24:30:56.95:594,57,0	0/0:11,0:12:23.53:0,24,266	0/0:8,0:8:12.87:0,13,131	0/0:23,0:23:38.37:0,38,509	0/0:9,0:9:15.04:0,15,210	0/0:20,0:22:35.13:0,35,394	1/1:6,21:27:66.12:685,66,0	0/0:8,0:8:18.04:0,18,254
chr10	103554054	.	A	AT	2661.12	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=1.934;DP=418;FS=22.492;HRun=7;HaplotypeScore=73.3799;InbreedingCoeff=0.9669;MQ=62.16;MQ0=1;MQRankSum=-8.729;QD=25.10;ReadPosRankSum=-4.052;VQSLOD=1.2352;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:75.08:0,75,711	0/0:6,0:6:11.48:0,11,108	0/0:7,0:7:21.03:0,21,202	0/0:8,0:8:18.86:0,19,157	0/0:16,0:16:45.07:0,45,435	0/0:13,0:13:29.78:0,30,289	0/0:22,0:22:47.57:0,48,458	1/1:8,27:32:81.21:962,81,0	0/0:8,0:7:18.03:0,18,173	0/0:14,0:14:42.07:0,42,406	0/0:7,0:7:18.02:0,18,174	0/0:18,0:18:17.55:0,18,374	0/0:13,0:13:26.80:0,27,258	0/0:12,0:12:15.97:0,16,170	0/0:7,0:7:12.01:0,12,116	0/0:12,0:12:30.04:0,30,290	0/0:28,0:28:81.13:0,81,782	0/0:18,0:18:39.51:0,40,402	1/1:8,16:22:57.13:654,57,0	1/1:1,20:20:51.16:616,51,0	1/1:3,9:12:23.99:257,24,0	0/0:9,0:9:18.02:0,18,173	0/0:10,0:10:30.05:0,30,289	0/0:16,0:16:32.74:0,33,318	0/0:13,0:13:17.77:0,18,174	0/0:17,0:17:51.08:0,51,493	1/1:2,12:14:30.07:347,30,0	0/0:7,0:7:18.02:0,18,174
chr10	103554064	.	A	AT	3614.77	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=7.887;DP=442;FS=0.448;HRun=10;HaplotypeScore=73.3223;InbreedingCoeff=0.8764;MQ=57.81;MQ0=4;MQRankSum=-4.109;QD=11.77;ReadPosRankSum=-0.369;VQSLOD=3.1565;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,6:32:38.92:363,39,0	1/1:1,0:5:11.36:57,11,0	0/0:6,0:6:5.97:0,6,49	0/1:9,0:7:8.06:8,0,57	0/0:17,0:19:16.47:0,16,280	1/1:6,0:15:22.89:120,23,0	1/1:5,0:25:48.65:254,49,0	1/1:15,17:29:8.02:475,8,0	1/1:3,1:10:17.15:86,17,0	0/0:14,0:14:26.92:0,27,221	0/0:8,0:8:20.86:0,21,172	1/1:3,1:24:45.27:248,45,0	1/1:1,0:14:22.86:115,23,0	1/1:8,3:11:8.75:62,9,0	0/0:8,0:8:17.94:0,18,140	0/0:10,0:11:17.91:0,18,145	0/0:32,0:31:77.89:0,78,640	1/1:6,1:19:33.45:180,33,0	1/1:6,15:20:44.94:459,45,0	1/1:5,19:23:42.10:445,42,0	1/1:4,6:10:12.03:128,12,0	0/0:8,0:8:17.96:0,18,147	1/1:2,0:9:20.07:105,20,0	1/1:2,1:15:25.73:146,26,0	1/1:4,1:13:17.34:108,17,0	0/0:17,1:19:14.93:0,15,308	1/1:7,8:15:24.06:256,24,0	0/0:10,0:10:20.96:0,21,172
chr10	103556584	.	T	TG	5970.45	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-14.047;DP=828;FS=7.041;HRun=4;HaplotypeScore=79.2712;InbreedingCoeff=1.0000;MQ=89.22;MQ0=0;MQRankSum=-3.704;QD=34.91;ReadPosRankSum=-0.785;VQSLOD=4.8547;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,126,1391	0/0:16,0:16:42.12:0,42,475	0/0:36,0:36:93.24:0,93,1034	0/0:27,0:27:46.61:0,47,773	0/0:45,0:45:99:0,132,1476	0/0:17,0:17:48.08:0,48,529	0/0:26,0:26:72.12:0,72,791	1/1:6,22:28:63.21:861,63,0	0/0:36,0:36:99:0,105,1173	0/0:32,0:32:96.26:0,96,1074	0/0:31,0:31:87.25:0,87,987	0/0:32,0:32:93.27:0,93,1054	0/0:24,0:24:66.16:0,66,730	0/0:22,0:22:66.14:0,66,733	0/0:28,0:28:84.24:0,84,953	0/0:22,0:22:66.17:0,66,739	0/0:31,0:31:90.23:0,90,1008	0/0:27,0:27:66.19:0,66,749	1/1:4,31:35:93.27:1237,93,0	1/1:3,30:33:87.25:1165,87,0	1/1:2,39:41:99:1395,102,0	0/0:31,0:31:93.27:0,93,1055	0/0:30,0:30:78.22:0,78,884	0/0:25,0:25:69.18:0,69,772	0/0:26,0:26:72.15:0,72,786	0/0:33,0:33:99:0,99,1108	1/1:1,33:34:96.32:1313,96,0	0/0:12,0:12:36.10:0,36,408
chr10	103556688	.	TCACAGAGA	T	7149.77	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=12.555;DP=814;FS=16.784;HRun=0;HaplotypeScore=207.0859;InbreedingCoeff=0.9105;MQ=68.12;MQ0=8;MQRankSum=-13.615;QD=19.02;ReadPosRankSum=-4.834;VQSLOD=2.1564;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:9,24:33:33.11:555,33,0	1/1:2,7:9:11.82:300,12,0	0/0:68,0:37:39.89:0,40,916	0/1:97,0:57:17.67:18,0,582	0/0:28,0:28:66.20:0,66,2404	1/1:3,18:21:33.11:659,33,0	1/1:5,14:19:18.06:404,18,0	0/0:32,0:32:36.12:0,36,1175	1/1:5,29:34:60.19:1296,60,0	0/0:33,0:33:81.28:0,81,3190	0/0:21,0:21:45.14:0,45,1599	1/1:5,22:27:51.17:1017,51,0	1/1:9,19:28:30.10:625,30,0	1/1:6,19:25:42.14:938,42,0	0/0:32,0:32:78.23:0,78,2776	0/0:20,0:20:42.14:0,42,1466	0/0:33,0:33:68.60:0,69,2680	1/1:14,1:15:15.19:357,15,0	0/0:20,0:20:42.14:0,42,1497	0/0:22,0:22:39.13:0,39,1469	0/0:42,0:42:72.19:0,72,2584	0/0:29,0:29:57.18:0,57,1973	1/1:6,12:18:12.04:268,12,0	1/1:11,19:30:11.95:198,12,0	1/1:3,17:20:27.09:515,27,0	0/0:36,0:36:78.25:0,78,2978	0/0:13,0:13:21.07:0,21,845	0/0:7,0:7:18.06:0,18,722
chr10	103556745	.	CAG	C	4553.72	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.324;DP=739;FS=33.861;HRun=0;HaplotypeScore=136.8064;InbreedingCoeff=0.9977;MQ=60.07;MQ0=4;MQRankSum=2.424;QD=32.30;ReadPosRankSum=1.018;VQSLOD=3.5792;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:30.10:0,30,525	0/0:12,0:12:20.81:0,21,367	0/0:48,0:33:82.91:0,83,1294	0/0:40,0:24:33.11:0,33,713	0/0:36,0:36:99:0,105,1923	0/0:13,0:13:24.08:0,24,438	0/0:16,0:16:30.08:0,30,503	1/1:3,31:34:84.19:1101,84,0	0/0:35,0:35:60.21:0,60,1096	0/0:30,0:30:87.29:0,87,1564	0/0:17,0:17:48.15:0,48,850	0/0:31,0:31:69.24:0,69,1262	0/0:27,0:27:60.19:0,60,1061	0/0:24,0:24:45.13:0,45,791	0/0:29,0:28:81.28:0,81,1474	0/0:23,0:23:69.22:0,69,1235	0/0:30,0:30:77.83:0,78,1332	0/0:16,0:16:48.14:0,48,835	1/1:7,17:22:57.18:797,57,0	1/1:0,24:24:66.22:944,66,0	1/1:4,37:40:78.60:1156,79,0	0/0:32,0:32:93.29:0,93,1641	0/0:24,0:24:42.14:0,42,760	0/0:29,0:29:33.10:0,33,593	0/0:26,0:26:42.14:0,42,763	0/0:28,0:28:72.25:0,72,1320	1/1:1,17:17:39.13:556,39,0	0/0:8,0:8:24.08:0,24,439
chr10	103557814	.	AGT	A	3841.55	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-0.004;DP=955;FS=0.795;HRun=0;HaplotypeScore=205.2951;InbreedingCoeff=0.9958;MQ=61.46;MQ0=8;MQRankSum=-0.241;QD=21.95;ReadPosRankSum=-0.112;VQSLOD=3.9302;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:84.29:0,84,1404	0/0:11,0:11:24.08:0,24,401	0/0:67,0:34:66.03:0,66,867	0/0:53,0:28:27.78:0,28,527	0/0:19,0:19:48.16:0,48,793	0/0:25,0:25:48.16:0,48,794	0/0:35,1:35:33.17:0,33,1115	1/1:13,8:19:30.09:370,30,0	0/0:42,0:42:87.03:0,87,1417	0/0:38,0:38:93.32:0,93,1536	0/0:30,0:30:69.24:0,69,1152	0/0:31,0:31:67.66:0,68,1084	0/0:28,0:28:63.67:0,64,1009	0/0:26,0:26:57.19:0,57,953	0/0:41,1:42:64.12:0,64,1581	0/0:27,0:27:66.70:0,67,1105	0/0:37,0:37:87.27:0,87,1406	0/0:39,0:39:84.29:0,84,1400	1/1:14,13:26:15.69:566,16,0	1/1:10,16:25:51.16:648,51,0	1/1:34,47:79:99:1741,135,0	0/0:26,0:26:63.20:0,63,1028	0/0:16,0:16:39.13:0,39,651	0/0:57,0:57:80.44:0,80,1344	0/0:31,0:31:66.13:0,66,1104	0/0:32,0:32:75.22:0,75,1215	1/1:8,12:17:28.71:517,29,0	0/0:19,0:19:57.16:0,57,898
chr10	103557862	.	GTGTGA	G	1115.26	PASS	AB=0.893;AC=13;AF=0.232;AN=56;BaseQRankSum=6.902;DP=838;FS=20.588;HRun=0;HaplotypeScore=196.8616;InbreedingCoeff=-0.1551;MQ=47.00;MQ0=32;MQRankSum=-6.792;QD=3.06;ReadPosRankSum=-0.664;VQSLOD=1.1281;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:40:19.55:0,20,564	0/1:9,0:9:92.01:92,0,191	1/1:42,0:3:7.27:80,7,0	0/1:53,0:8:34.12:104,0,34	0/0:16,0:13:30.10:0,30,667	0/1:24,1:23:99:120,0,397	0/0:33,1:31:38.65:0,39,563	0/1:37,4:38:99:340,0,978	0/1:39,1:39:46.63:47,0,787	0/0:35,0:34:90.28:0,90,1984	0/0:26,0:26:66.52:0,67,1573	0/1:29,1:29:76.44:76,0,679	0/1:23,0:23:10.78:11,0,431	0/0:14,1:15:21.54:0,22,326	0/0:41,0:40:99:0,111,2693	0/0:29,0:29:81.27:0,81,1967	0/0:25,0:25:21.76:0,22,1184	0/0:30,0:30:7.71:0,8,780	0/1:30,8:34:99:270,0,842	0/1:9,8:16:29.45:29,0,129	0/0:47,1:44:5.62:0,6,323	0/0:21,0:20:60.20:0,60,1351	0/1:12,7:17:44.41:44,0,303	0/0:50,0:50:35.89:0,36,537	0/0:16,0:16:1.78:0,2,199	0/0:29,0:29:79.15:0,79,1928	0/1:18,8:23:55.93:56,0,709	0/0:17,0:17:48.16:0,48,1010
chr10	103557867	.	A	ATGTGTGTG	2757.19	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=4.998;DP=852;FS=3.276;HRun=0;HaplotypeScore=222.9235;InbreedingCoeff=0.6045;MQ=48.86;MQ0=30;MQRankSum=-8.347;QD=4.29;ReadPosRankSum=-4.264;VQSLOD=1.3811;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,15:44:3.01:44,3,0	1/1:6,4:12:9.03:298,9,0	1/1:39,0:4:6.88:85,7,0	0/1:45,0:11:21.81:145,0,22	0/0:14,0:12:15.05:0,15,359	1/1:17,9:27:6.49:158,6,0	1/1:15,14:35:3.01:41,3,0	1/1:40,0:37:23.19:484,23,0	1/1:22,16:39:9.02:317,9,0	0/0:31,0:31:51.16:0,51,1152	0/0:22,0:24:49.04:0,49,1029	1/1:23,6:30:6.02:154,6,0	1/1:14,9:28:11.67:219,12,0	1/1:10,5:17:0.47:1,0,0	0/0:40,0:40:93.28:0,93,2036	0/0:24,0:28:60.20:0,60,1369	0/1:24,0:25:0.20:0,0,763	1/1:19,16:36:5.38:133,5,0	1/1:34,0:31:27.09:558,27,0	1/1:16,0:15:3.01:38,3,0	1/1:29,12:44:0.94:2,1,0	0/0:19,0:20:39.13:0,39,885	1/1:20,0:18:6.96:112,7,0	1/1:30,16:49:1.69:23,2,0	1/1:7,6:21:2.99:24,3,0	0/0:27,0:31:62.13:0,62,1435	1/1:25,0:23:6.49:103,6,0	0/0:17,0:17:15.05:0,15,383
chr10	103557879	.	G	GA	582.78	PASS	AB=0.847;AC=4;AF=0.071;AN=56;BaseQRankSum=6.475;DP=832;FS=3.853;HRun=0;HaplotypeScore=153.5452;InbreedingCoeff=-0.0914;MQ=52.04;MQ0=26;MQRankSum=-7.773;QD=4.22;ReadPosRankSum=-6.376;VQSLOD=2.1578;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:46,1:45:23.84:0,24,408	0/0:10,0:10:13.84:0,14,163	0/0:42,0:15:42.11:0,42,541	0/0:46,0:19:47.25:0,47,606	0/0:14,0:11:23.97:0,24,308	0/0:28,0:26:12.29:0,12,284	0/0:41,0:38:13.75:0,14,394	0/1:29,4:31:99:128,0,812	0/0:34,0:33:31.89:0,32,385	0/0:33,0:32:93.19:0,93,1251	0/0:23,0:23:59.86:0,60,785	0/0:31,0:30:44.21:0,44,615	0/0:28,0:28:29.21:0,29,303	0/0:18,0:18:11.08:0,11,239	0/0:45,0:43:99:0,118,1617	0/0:25,0:25:71.92:0,72,927	0/0:26,0:26:62.34:0,62,826	0/0:37,0:38:35.14:0,35,605	0/1:30,5:31:99:205,0,763	0/0:13,1:13:6.02:0,6,75	0/1:42,5:43:14.79:15,0,146	0/0:19,0:18:53.97:0,54,701	0/0:22,0:20:21.53:0,22,267	0/0:47,0:47:26.01:0,26,371	0/0:18,0:18:2.70:0,3,97	0/0:32,0:32:94.13:0,94,1194	0/1:14,9:20:25.83:343,0,26	0/0:13,0:13:36.12:0,36,499
chr10	103558167	.	C	CGTGT	1491.91	PASS	AB=0.933;AC=18;AF=0.333;AN=54;BaseQRankSum=-3.468;DP=560;FS=9.250;HRun=0;HaplotypeScore=102.3766;InbreedingCoeff=0.4422;MQ=62.29;MQ0=6;MQRankSum=-0.075;QD=6.60;ReadPosRankSum=-2.081;VQSLOD=1.2650;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:11.88:0,12,100	0/0:7,0:7:2.99:0,3,25	./.	0/0:23,0:18:0.47:0,0,1	0/0:16,0:16:5.52:0,6,182	0/1:15,0:15:9.02:41,0,9	0/0:17,0:17:8.21:0,8,74	1/1:35,0:35:23.12:212,23,0	0/1:24,0:24:26.36:26,0,81	0/0:19,0:18:1.07:0,1,132	0/1:17,0:17:18.58:19,0,232	0/0:17,0:17:7.24:0,7,53	1/1:7,0:7:3.46:25,3,0	0/0:21,0:21:2.99:0,3,25	0/0:15,0:15:32.79:0,33,396	0/0:15,0:16:24.40:0,24,336	0/0:31,0:35:43.66:0,44,817	0/0:23,0:23:11.99:0,12,101	1/1:24,0:23:10.03:229,10,0	0/1:12,7:19:24.17:134,0,24	1/1:15,18:36:12.04:286,12,0	0/0:12,0:12:27.44:0,27,354	1/1:9,0:9:9.82:76,10,0	0/0:25,0:25:26.88:0,27,216	1/1:14,0:14:0.66:113,1,0	0/0:28,0:29:30.60:0,31,459	1/1:10,15:26:21.54:502,22,0	0/0:11,0:12:17.85:0,18,257
chr10	103558198	.	GTGTA	G	2999.59	PASS	AB=0.848;AC=23;AF=0.411;AN=56;BaseQRankSum=-0.425;DP=560;FS=2.556;HRun=0;HaplotypeScore=90.2011;InbreedingCoeff=0.8367;MQ=60.86;MQ0=11;MQRankSum=-0.773;QD=13.21;ReadPosRankSum=-2.556;VQSLOD=2.9098;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:12.04:227,12,0	1/1:2,6:8:3.01:57,3,0	0/0:21,0:8:14.13:0,14,183	0/0:28,0:15:18.05:0,18,185	0/0:20,0:18:41.87:0,42,739	1/1:15,0:15:36.43:315,36,0	1/1:19,3:22:33.89:372,34,0	0/0:25,0:24:7.16:0,7,654	0/1:23,5:28:8.27:478,0,8	0/0:13,0:12:16.94:0,17,436	0/0:16,0:16:10.82:0,11,421	1/1:1,13:14:9.03:166,9,0	1/1:13,0:13:20.91:168,21,0	1/1:2,20:22:2.89:57,3,0	0/0:14,0:14:38.53:0,39,547	0/0:16,0:16:16.50:0,16,637	0/0:36,0:36:66.17:0,66,1688	1/1:5,17:22:14.08:212,14,0	0/0:16,0:15:11.39:0,11,353	0/0:16,0:15:14.93:0,15,223	0/0:36,0:36:35.64:0,36,481	0/0:16,0:16:21.57:0,22,769	1/1:15,0:15:26.93:223,27,0	1/1:1,22:23:27.09:488,27,0	1/1:22,0:22:47.50:450,48,0	0/0:23,0:23:50.31:0,50,1065	0/0:25,0:25:41.84:0,42,619	0/0:12,0:12:27.01:0,27,458
chr10	103558200	.	GTA	G	2158.56	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=1.755;DP=548;FS=7.666;HRun=0;HaplotypeScore=78.0602;InbreedingCoeff=0.6943;MQ=63.29;MQ0=9;MQRankSum=0.434;QD=8.05;ReadPosRankSum=-1.767;VQSLOD=1.9292;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:11.97:97,12,0	1/1:7,0:7:2.99:24,3,0	0/0:24,0:11:23.12:0,23,230	0/0:25,0:14:19.57:0,20,178	0/0:20,0:18:31.61:0,32,499	1/1:15,0:15:38.95:340,39,0	1/1:22,0:22:35.95:298,36,0	0/0:24,0:23:2.17:0,2,461	1/1:28,1:29:20.10:396,20,0	0/0:11,0:10:0.07:0,0,285	0/1:16,0:16:0.96:1,0,277	1/1:13,0:13:8.96:69,9,0	1/1:11,0:11:20.78:168,21,0	1/1:21,0:21:2.99:24,3,0	0/0:14,0:14:17.32:0,17,344	0/0:16,0:16:38.92:0,39,497	0/0:36,0:36:78.20:0,78,1157	1/1:20,1:21:13.78:99,14,0	0/1:16,0:15:13.19:13,0,198	0/1:16,0:15:2.95:3,0,169	0/0:34,0:34:38.73:0,39,384	0/0:16,0:16:4.47:0,4,476	1/1:13,0:13:26.92:217,27,0	1/1:23,0:23:26.92:213,27,0	1/1:20,2:22:47.47:398,47,0	0/0:23,0:23:39.36:0,39,697	0/0:26,0:26:44.62:0,45,445	0/0:11,0:11:16.72:0,17,308
chr10	103558330	.	CT	C	5497.61	PASS	AB=0.737;AC=24;AF=0.429;AN=56;BaseQRankSum=12.375;DP=526;FS=8.383;HRun=9;HaplotypeScore=63.1790;InbreedingCoeff=0.8345;MQ=71.89;MQ0=0;MQRankSum=0.016;QD=20.44;ReadPosRankSum=1.771;VQSLOD=5.5236;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,40:43:99:1043,114,0	1/1:1,2:3:6:55,6,0	0/1:16,1:14:14.99:15,0,223	0/0:16,0:11:2.70:0,3,153	0/0:14,0:14:33.10:0,33,381	1/1:4,18:22:51.02:467,51,0	1/1:1,26:27:66.03:604,66,0	0/0:21,0:21:48:0,48,546	1/1:1,18:19:48.02:439,48,0	0/0:11,0:11:27.08:0,27,312	0/0:13,0:13:33.10:0,33,381	1/1:0,12:12:33.02:302,33,0	0/1:1,8:9:4.66:193,0,5	1/1:2,17:19:44.99:405,45,0	0/0:15,0:15:42.11:0,42,475	0/0:12,0:13:35.97:0,36,396	0/0:31,0:30:81.24:0,81,934	1/1:4,21:25:51.01:467,51,0	0/0:20,0:21:50.97:0,51,554	0/0:12,0:12:30.08:0,30,336	0/0:28,0:28:72.13:0,72,804	0/0:12,0:12:30.07:0,30,328	1/1:2,17:19:38.89:357,39,0	1/1:2,24:26:57.03:522,57,0	1/1:1,27:28:69.04:631,69,0	0/0:22,0:22:60.18:0,60,692	0/0:18,0:18:45.13:0,45,519	0/0:9,0:9:21.06:0,21,242
chr10	103563292	.	ACG	A	1296.87	PASS	AB=0.990;AC=16;AF=0.286;AN=56;BaseQRankSum=13.643;DP=659;FS=0.000;HRun=0;HaplotypeScore=104.5737;InbreedingCoeff=-0.2218;MQ=57.91;MQ0=10;MQRankSum=3.093;QD=3.80;ReadPosRankSum=3.680;VQSLOD=2.2855;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:45,0:45:99:223,0,113	1/1:8,0:8:10.61:65,11,0	0/0:18,0:6:14.38:0,14,89	0/1:21,0:2:0.86:1,0,15	0/0:31,0:31:55.27:0,55,1022	0/1:18,0:18:48.17:48,0,89	0/1:22,0:22:95.92:96,0,97	0/0:35,0:33:71.50:0,71,950	0/1:18,0:18:99:103,0,106	0/0:27,0:26:0.19:0,0,779	0/0:25,0:25:60.15:0,60,923	0/1:22,0:22:61.74:145,0,62	0/1:20,1:21:41.35:164,0,41	0/1:22,0:22:88.98:89,0,105	0/0:21,0:21:24.69:0,25,679	0/1:13,1:14:20.79:21,0,549	0/0:28,3:31:71.37:0,71,1319	0/1:26,0:26:36.17:133,0,36	0/0:18,0:17:47.68:0,48,576	0/0:29,0:29:42.23:0,42,1040	0/1:31,1:31:2.43:2,0,1090	0/0:14,0:14:42.10:0,42,680	0/1:24,0:24:69.66:112,0,70	0/1:24,0:24:85.37:137,0,85	0/1:24,0:24:69.29:113,0,69	0/0:28,0:28:46.56:0,47,1056	0/0:20,0:19:22.74:0,23,832	0/0:20,0:20:40.97:0,41,915
chr10	103563294	.	GCA	G	5444.14	PASS	AB=0.857;AC=31;AF=0.574;AN=54;BaseQRankSum=5.478;DP=663;FS=0.775;HRun=0;HaplotypeScore=92.0874;InbreedingCoeff=0.2473;MQ=57.89;MQ0=10;MQRankSum=1.942;QD=11.27;ReadPosRankSum=2.032;VQSLOD=4.7128;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,31:45:59.63:837,60,0	1/1:1,7:8:17.89:189,18,0	0/0:17,1:5:2.80:0,3,13	./.	0/1:27,2:31:26.90:27,0,665	1/1:7,9:18:17.76:213,18,0	1/1:7,14:23:24.22:363,24,0	0/0:30,2:30:16.09:0,16,616	0/1:6,12:18:10.89:349,0,11	0/1:21,6:27:99:151,0,654	0/0:23,0:24:2.15:0,2,607	1/1:7,13:22:47.37:471,47,0	1/1:6,14:21:38.91:419,39,0	1/1:8,12:22:25.05:364,25,0	0/1:18,2:20:31.46:31,0,435	0/1:14,1:15:13.66:14,0,448	0/0:31,1:32:43.22:0,43,1069	1/1:6,19:26:13.47:497,13,0	0/0:17,0:16:24.08:0,24,362	0/1:27,3:30:41.77:42,0,732	0/1:28,6:33:99:120,0,956	0/0:15,0:15:39.13:0,39,589	1/1:6,17:24:38.95:434,39,0	1/1:5,16:24:3.64:450,4,0	1/1:4,17:23:41.79:448,42,0	0/1:26,3:29:9.80:10,0,727	0/1:20,2:21:16.04:16,0,601	0/0:19,2:21:19.19:0,19,728
chr10	103566528	.	G	GA	12634.33	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-0.949;DP=629;FS=4.802;HRun=4;HaplotypeScore=72.5169;InbreedingCoeff=0.9953;MQ=86.82;MQ0=1;MQRankSum=-2.912;QD=32.65;ReadPosRankSum=2.799;VQSLOD=5.6390;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,46:50:99:1580,117,0	1/1:1,6:7:18.02:223,18,0	0/0:31,0:29:59.13:0,59,594	0/0:25,0:24:59.37:0,59,541	0/0:20,0:20:51.12:0,51,565	1/1:0,19:19:33.11:447,33,0	1/1:0,20:20:48.16:649,48,0	1/1:5,30:35:90.24:1163,90,0	1/1:1,17:18:45.15:609,45,0	0/0:22,0:22:63.14:0,63,698	0/0:13,0:13:35.82:0,36,374	1/1:2,21:23:60.20:811,60,0	1/1:3,14:17:42.14:559,42,0	1/1:1,15:16:45.15:608,45,0	0/0:17,0:17:45.08:0,45,481	0/0:18,1:19:13.58:0,14,527	0/0:42,0:42:99:0,123,1335	1/1:2,23:25:60.16:792,60,0	1/1:2,21:23:63.10:744,63,0	1/1:0,14:14:39.13:527,39,0	1/1:3,31:34:72.24:973,72,0	0/0:17,0:17:48.04:0,48,496	1/1:0,14:14:42.14:567,42,0	1/1:1,30:31:72.24:973,72,0	1/1:0,19:19:45.15:609,45,0	0/0:27,0:27:78.21:0,78,874	1/1:7,15:22:63.17:801,63,0	0/0:8,0:8:24.07:0,24,272
chr10	103566620	.	AAGGACAGCCCC	A	6490.08	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.283;DP=581;FS=3.874;HRun=0;HaplotypeScore=202.7292;InbreedingCoeff=0.9914;MQ=88.19;MQ0=0;MQRankSum=-10.855;QD=66.91;ReadPosRankSum=-3.670;VQSLOD=3.5380;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,135,6977	0/0:7,0:7:11.96:0,12,656	0/0:22,0:22:60.12:0,60,2513	0/0:23,0:23:52.57:0,53,2097	0/0:19,0:19:54.17:0,54,2643	0/0:23,0:23:57.20:0,57,3079	0/0:28,0:28:78.25:0,78,3924	1/1:3,18:21:54.07:1232,54,0	0/0:20,0:20:57.18:0,57,2859	0/0:21,0:21:60.21:0,60,3280	0/0:7,0:7:21.06:0,21,1018	0/0:30,0:30:90.28:0,90,4629	0/0:13,0:13:36.12:0,36,2052	0/0:21,0:21:57.20:0,57,2978	0/0:20,0:20:57.17:0,57,2882	0/0:17,0:17:48.15:0,48,2491	0/0:28,0:28:81.19:0,81,3892	0/0:27,0:27:78.27:0,78,4285	1/1:0,11:11:33.05:718,33,0	1/1:0,16:16:47.99:1239,48,0	1/1:9,13:22:53.83:1148,54,0	0/0:14,0:14:39.12:0,39,2010	0/0:11,0:11:27.09:0,27,1467	0/0:27,0:27:66.18:0,66,3608	0/0:14,0:14:39.13:0,39,2198	0/0:23,0:23:63.21:0,63,3289	1/1:1,26:27:63.22:2153,63,0	0/0:20,0:20:60.21:0,60,3336
chr10	103568196	.	CGTGT	C	12097.22	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=7.500;DP=851;FS=1.504;HRun=0;HaplotypeScore=147.6464;InbreedingCoeff=0.9825;MQ=56.46;MQ0=13;MQRankSum=1.205;QD=23.26;ReadPosRankSum=3.067;VQSLOD=4.8917;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,17:39:57.18:916,57,0	1/1:2,10:12:18.06:301,18,0	0/0:33,0:9:15.04:0,15,231	0/0:51,0:11:8.99:0,9,129	0/0:20,0:21:47.42:0,47,886	1/1:10,13:22:39.12:625,39,0	1/1:9,19:30:18.78:460,19,0	1/1:14,23:37:65.93:907,66,0	1/1:11,13:24:52.92:859,53,0	0/0:40,0:45:99:0,104,1967	0/0:7,0:7:18.06:0,18,421	1/1:13,14:27:47.43:922,47,0	1/1:8,12:22:51.14:775,51,0	1/1:10,26:36:50.89:820,51,0	0/0:32,0:34:74.69:0,75,1556	0/0:25,0:25:48.36:0,48,1042	0/0:46,0:49:99:0,114,2455	1/1:15,11:26:48.03:896,48,0	1/1:11,13:23:44.10:647,44,0	1/1:6,19:25:27.09:452,27,0	1/1:24,49:75:57.18:928,57,0	0/0:27,0:28:68.96:0,69,1533	1/1:5,18:23:24.08:401,24,0	1/1:7,36:44:66.21:1102,66,0	1/1:9,21:30:13.83:481,14,0	0/0:23,0:25:59.18:0,59,1207	1/1:1,15:20:38.82:606,39,0	0/0:9,0:11:29.57:0,30,565
chr10	103568293	.	G	GTGTCTGTC	2709.36	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=2.774;DP=960;FS=0.504;HRun=0;HaplotypeScore=200.2543;InbreedingCoeff=0.8804;MQ=59.49;MQ0=8;MQRankSum=0.525;QD=8.29;ReadPosRankSum=-0.063;VQSLOD=2.6458;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,38:62:1.11:0,1,3	1/1:12,2:14:17.97:200,18,0	0/0:45,0:28:44.38:0,44,708	0/0:65,0:48:35.04:0,35,573	0/0:32,0:32:75.22:0,75,1727	1/1:5,26:37:0.89:2,1,0	1/1:42,0:42:23.67:545,24,0	0/0:34,0:34:41.99:0,42,609	1/1:8,0:33:41.95:345,42,0	0/0:40,0:40:84.27:0,84,1901	0/0:18,0:18:36.09:0,36,774	1/1:9,27:37:3.01:125,3,0	1/1:7,21:30:3:25,3,0	1/1:18,3:25:29.94:616,30,0	0/0:41,0:41:90.23:0,90,1994	0/0:35,0:35:72.17:0,72,1479	0/0:28,0:28:47.92:0,48,1051	1/1:13,17:32:10.28:265,10,0	0/0:24,0:23:33.06:0,33,671	0/0:20,0:20:35.90:0,36,651	0/0:56,0:56:99:0,105,2259	0/0:21,0:21:44.26:0,44,851	./.	1/1:41,4:42:20.89:427,21,0	1/1:19,7:25:20.99:355,21,0	0/0:48,0:48:90.28:0,90,1996	0/0:23,0:23:57.14:0,57,1253	0/0:14,0:13:21.04:0,21,433
chr10	103572180	.	G	GCT	6943.87	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=8.596;DP=764;FS=36.347;HRun=0;HaplotypeScore=163.7811;InbreedingCoeff=0.9652;MQ=71.18;MQ0=9;MQRankSum=-1.569;QD=21.84;ReadPosRankSum=1.296;VQSLOD=3.3101;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:41,2:43:7.28:609,7,0	1/1:7,1:8:18.06:275,18,0	0/0:48,0:28:62.40:0,62,709	0/0:62,0:36:53.60:0,54,602	0/0:22,0:22:48.15:0,48,603	1/1:24,2:25:39.13:586,39,0	1/1:34,1:34:39.04:580,39,0	0/0:23,0:23:60.19:0,60,754	1/1:22,4:25:39.11:545,39,0	0/0:28,0:28:75.23:0,75,935	0/0:14,0:14:24.06:0,24,289	1/1:31,3:34:77.02:1146,77,0	1/1:29,0:29:60.13:815,60,0	1/1:32,0:32:47.83:681,48,0	0/0:23,0:23:63.20:0,63,797	0/0:30,0:30:78.25:0,78,981	0/0:34,0:35:87.08:0,87,1053	1/1:14,2:16:30.10:482,30,0	0/0:24,0:24:54.17:0,54,678	0/0:22,0:22:27.09:0,27,341	0/0:38,0:38:42.12:0,42,516	0/0:18,0:18:36.11:0,36,454	1/1:19,1:21:23.87:344,24,0	1/1:29,0:29:4.30:526,4,0	1/1:15,3:18:24.06:354,24,0	0/0:22,0:22:51.16:0,51,648	0/0:28,0:28:57.08:0,57,702	0/0:9,0:9:18.06:0,18,227
chr10	103572191	.	CTGAG	C	2328.97	PASS	AB=0.978;AC=27;AF=0.482;AN=56;BaseQRankSum=12.740;DP=795;FS=12.138;HRun=0;HaplotypeScore=198.5119;InbreedingCoeff=0.6359;MQ=63.69;MQ0=10;MQRankSum=-3.268;QD=5.48;ReadPosRankSum=4.298;VQSLOD=1.7170;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:44,1:45:12.83:229,13,0	0/1:7,1:8:3.20:104,0,3	0/0:43,0:23:55.91:0,56,542	0/0:52,0:27:52.37:0,52,523	0/1:21,0:21:2.95:3,0,286	1/1:24,2:26:22.97:199,23,0	1/1:32,3:35:13.10:192,13,0	0/0:26,0:26:67.18:0,67,579	1/1:23,1:23:7.95:193,8,0	0/0:34,0:34:70.36:0,70,743	0/0:18,0:18:26.64:0,27,240	1/1:36,1:37:41.52:404,42,0	1/1:26,3:30:27.23:314,27,0	1/1:32,3:35:45.33:371,45,0	0/1:35,0:35:19.76:20,0,468	0/0:31,0:31:12.70:0,13,566	0/0:33,0:33:11.77:0,12,616	1/1:15,0:15:23.91:143,24,0	0/0:20,0:20:32.94:0,33,394	0/0:24,0:24:26.46:0,26,207	0/0:44,0:44:38.79:0,39,327	0/0:17,0:17:38.87:0,39,334	1/1:25,1:26:14.20:94,14,0	1/1:29,1:29:4.50:134,4,0	1/1:19,0:18:10.67:65,11,0	0/1:25,0:25:22.78:23,0,432	0/0:28,0:27:17.58:0,18,295	0/1:12,0:12:51.09:51,0,123
chr10	103572192	.	TGA	T	3786.89	PASS	AB=0.991;AC=31;AF=0.554;AN=56;BaseQRankSum=9.546;DP=785;FS=9.745;HRun=0;HaplotypeScore=170.9431;InbreedingCoeff=0.4159;MQ=62.59;MQ0=11;MQRankSum=-0.329;QD=7.32;ReadPosRankSum=6.138;VQSLOD=2.3210;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,32:43:3.22:306,3,0	1/1:7,1:8:13.71:111,14,0	0/0:42,0:22:55.91:0,56,542	0/0:51,0:26:53.24:0,53,532	0/1:20,0:20:27.05:27,0,134	1/1:9,17:26:1.88:247,2,0	1/1:12,23:34:7.89:175,8,0	0/0:26,0:26:67.18:0,67,580	1/1:7,16:22:29.72:387,30,0	0/1:34,0:34:15.15:15,0,436	0/0:18,0:18:9.14:0,9,157	1/1:25,12:37:24.10:343,24,0	1/1:7,23:30:26.02:451,26,0	1/1:6,28:34:45.80:586,46,0	0/1:35,0:35:14.84:15,0,294	0/1:30,0:30:34.30:34,0,294	0/1:33,1:34:99:100,0,262	1/1:10,4:14:14.66:190,15,0	0/0:20,0:20:56.48:0,56,436	0/0:23,0:23:26.60:0,27,207	0/0:44,0:43:38.80:0,39,329	0/0:16,0:16:13.40:0,13,221	1/1:8,18:26:14.58:217,15,0	1/1:6,22:28:29.23:370,29,0	1/1:7,12:18:10.92:145,11,0	0/1:27,1:28:23.56:24,0,264	0/0:28,0:27:51.21:0,51,350	0/1:12,0:12:44.80:45,0,81
chr10	103572194	.	AGT	A	4528.80	PASS	AB=0.688;AC=44;AF=0.846;AN=52;BaseQRankSum=3.006;DP=781;FS=2.903;HRun=0;HaplotypeScore=169.4066;InbreedingCoeff=0.2091;MQ=61.98;MQ0=13;MQRankSum=0.840;QD=7.01;ReadPosRankSum=0.774;VQSLOD=4.6432;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:43:31.76:195,32,0	1/1:7,0:8:8.61:47,9,0	./.	./.	1/1:9,9:20:26.74:257,27,0	0/1:24,0:25:13.14:101,0,13	1/1:32,0:35:19.16:106,19,0	0/1:14,0:25:0:0,0,0	1/1:22,0:22:29.21:189,29,0	1/1:19,14:34:16.08:400,16,0	0/1:7,7:16:36.36:57,0,36	1/1:29,0:36:42.39:247,42,0	1/1:29,0:30:16.32:242,16,0	1/1:32,0:34:46.48:283,46,0	0/1:12,21:37:37.32:380,0,37	0/1:12,14:29:0.54:362,0,1	1/1:16,17:35:8.02:458,8,0	1/1:10,0:14:17.47:102,17,0	1/1:15,0:19:8.52:42,9,0	0/1:10,0:23:0:0,0,0	0/0:28,0:43:2.99:0,3,25	1/1:11,5:16:9.02:99,9,0	1/1:23,0:25:14.51:98,15,0	1/1:27,1:28:26.76:199,27,0	1/1:16,0:18:8.91:60,9,0	1/1:15,14:30:46.66:424,47,0	1/1:12,0:24:11.36:56,11,0	1/1:9,1:12:16.72:123,17,0
chr10	103574294	.	CTTTGTCTT	C	6245.11	PASS	AB=0.906;AC=27;AF=0.482;AN=56;BaseQRankSum=1.922;DP=628;FS=2.062;HRun=0;HaplotypeScore=171.6349;InbreedingCoeff=0.5554;MQ=63.28;MQ0=10;MQRankSum=-11.672;QD=18.42;ReadPosRankSum=0.434;VQSLOD=4.2990;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,7:24:3.15:523,3,0	1/1:0,2:2:3.01:88,3,0	0/0:31,0:20:50.80:0,51,1185	0/0:54,0:40:48.55:0,49,2498	0/0:14,0:14:42.14:0,42,1471	1/1:2,17:19:15.05:396,15,0	1/1:2,21:23:18.06:483,18,0	0/1:44,0:43:99:150,0,806	1/1:0,28:28:39.13:1097,39,0	0/0:22,0:22:66.21:0,66,2380	0/0:11,0:11:30.10:0,30,1174	1/1:1,18:19:36.12:1010,36,0	1/1:0,16:16:30.10:874,30,0	1/1:8,7:18:27.09:693,27,0	0/0:26,0:26:78.25:0,78,2876	0/0:21,0:21:63.21:0,63,2274	0/0:28,0:28:84.29:0,84,3048	1/1:3,3:9:6.38:291,6,0	0/1:21,0:19:36.62:37,0,492	0/0:11,0:11:31.12:0,31,423	0/1:51,0:50:13.90:14,0,1363	0/0:14,0:14:39.13:0,39,1561	0/1:1,8:9:39.07:166,0,39	1/1:3,23:25:5.63:161,6,0	1/1:1,9:10:9.03:221,9,0	0/0:27,0:27:81.11:0,81,2112	0/1:18,0:17:43.09:43,0,552	0/0:27,0:27:54.12:0,54,1245
chr10	103574300	.	CTT	C	7537.88	PASS	AB=0.760;AC=32;AF=0.571;AN=56;BaseQRankSum=9.282;DP=613;FS=5.316;HRun=3;HaplotypeScore=109.1858;InbreedingCoeff=0.7923;MQ=61.69;MQ0=11;MQRankSum=-4.941;QD=21.98;ReadPosRankSum=1.420;VQSLOD=2.9183;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,7:24:11.10:348,11,0	1/1:2,0:2:3:29,3,0	0/0:32,0:21:31.55:0,32,649	0/0:54,0:37:79.17:0,79,1461	0/0:15,0:15:44.14:0,44,759	1/1:17,1:18:14.98:148,15,0	1/1:21,0:21:18.03:197,18,0	1/1:6,36:41:53.70:1597,54,0	1/1:29,0:29:39.02:385,39,0	0/0:20,0:20:60.20:0,60,1125	0/0:13,0:13:36.11:0,36,646	1/1:18,2:19:35.94:321,36,0	1/1:16,0:16:29.88:228,30,0	1/1:12,4:16:29.88:320,30,0	0/0:24,0:24:69.24:0,69,1317	0/0:21,0:21:63.22:0,63,1196	0/0:28,0:28:81.24:0,81,1464	1/1:6,3:9:6.03:161,6,0	1/1:5,17:20:42.28:708,42,0	0/1:1,12:13:21.58:339,0,22	1/1:2,48:49:99:1739,111,0	0/0:14,0:14:42.12:0,42,714	0/1:9,0:9:38.97:46,0,39	1/1:24,0:23:8.99:101,9,0	1/1:9,0:9:8.99:91,9,0	0/0:25,0:25:74.78:0,75,930	1/1:0,18:17:51.17:780,51,0	0/0:23,0:23:44.69:0,45,487
chr10	103574302	.	TTGTC	T	1008.07	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.717;DP=617;FS=5.778;HRun=0;HaplotypeScore=151.3409;InbreedingCoeff=0.5451;MQ=61.99;MQ0=12;MQRankSum=0.831;QD=21.00;ReadPosRankSum=3.749;VQSLOD=3.2488;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:19.40:0,19,161	0/0:2,0:2:0:0,0,0	0/0:31,0:19:22.99:0,23,400	0/0:54,0:37:34.06:0,34,643	0/0:15,0:15:30.10:0,30,623	0/0:18,0:18:2.60:0,3,26	0/0:22,0:22:6.07:0,6,72	0/0:41,0:40:66.14:0,66,759	0/0:29,0:29:3.88:0,4,28	0/0:20,0:20:36.12:0,36,777	0/0:13,0:13:21.07:0,21,456	0/0:20,0:19:4.81:0,5,30	0/0:17,0:17:0.95:0,1,40	0/0:17,0:17:9.23:0,9,101	0/0:23,0:23:60.21:0,60,1331	0/0:21,0:21:42.13:0,42,864	0/0:29,0:29:72.25:0,72,1527	0/0:9,0:9:6.89:0,7,60	0/0:21,0:19:24.07:0,24,287	0/0:13,0:13:18.05:0,18,212	0/0:49,0:48:84.23:0,84,934	0/0:15,0:15:36.12:0,36,788	0/0:9,0:9:2.48:0,2,45	0/0:26,0:25:8.43:0,8,101	0/0:9,0:9:2.97:0,3,27	1/1:10,15:25:45.13:685,45,0	0/0:19,0:18:48.02:0,48,492	1/1:7,16:23:27.09:441,27,0
chr10	103574397	.	CTG	C	4572.74	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=7.137;DP=414;FS=5.128;HRun=0;HaplotypeScore=69.5552;InbreedingCoeff=0.9880;MQ=61.18;MQ0=1;MQRankSum=-1.415;QD=29.69;ReadPosRankSum=1.394;VQSLOD=6.2425;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:48.16:634,48,0	1/1:0,6:6:12.04:165,12,0	0/0:22,0:20:48.10:0,48,688	0/0:23,0:19:41.21:0,41,650	0/0:12,0:12:33.10:0,33,543	1/1:4,12:16:45.11:563,45,0	1/1:1,12:13:15.05:206,15,0	0/0:29,0:29:84.27:0,84,1427	1/1:0,13:13:33.11:444,33,0	0/0:27,0:27:72.22:0,72,1194	0/0:8,0:8:21.05:0,21,343	1/1:0,12:12:33.11:445,33,0	1/1:7,8:15:36.08:442,36,0	1/1:1,11:12:27.09:367,27,0	0/0:12,0:12:36.10:0,36,586	0/0:14,0:14:36.12:0,36,638	0/0:27,0:27:66.65:0,67,1099	1/1:0,10:10:24.08:329,24,0	0/0:10,0:10:27.09:0,27,479	0/0:9,0:9:21.05:0,21,343	0/0:18,0:18:45.10:0,45,711	0/0:10,0:10:27.07:0,27,441	1/1:0,6:6:15.05:206,15,0	1/1:3,17:20:42.11:530,42,0	1/1:0,7:7:18.06:242,18,0	0/0:15,0:15:42.13:0,42,689	0/0:10,0:10:27.08:0,27,449	0/0:14,0:14:36.12:0,36,637
chr10	103574939	.	T	TTTG	6668.28	PASS	AB=0.634;AC=32;AF=0.571;AN=56;BaseQRankSum=9.639;DP=523;FS=0.783;HRun=0;HaplotypeScore=104.5604;InbreedingCoeff=0.8499;MQ=63.68;MQ0=8;MQRankSum=-7.795;QD=23.65;ReadPosRankSum=0.219;VQSLOD=4.4654;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,5:18:34.08:567,34,0	1/1:2,5:7:12.82:212,13,0	0/0:23,0:8:14.37:0,14,146	0/0:34,0:20:16.34:0,16,345	0/0:16,0:16:48.14:0,48,694	1/1:4,12:16:30.09:628,30,0	1/1:4,14:18:11.85:311,12,0	1/1:7,0:14:32.44:250,32,0	1/1:2,16:19:23.67:446,24,0	0/0:22,0:22:63.17:0,63,838	0/0:10,0:10:30.08:0,30,427	1/1:2,17:20:24.08:500,24,0	0/1:6,7:14:10.30:310,0,10	1/1:3,10:15:25.98:477,26,0	0/0:20,0:20:34.17:0,34,840	0/0:24,0:24:61.19:0,61,933	0/0:26,0:25:72.18:0,72,958	0/1:5,7:11:11.88:157,0,12	1/1:18,0:28:59.89:428,60,0	1/1:1,0:10:18:178,18,0	1/1:9,0:14:28.74:218,29,0	0/0:23,0:23:66.16:0,66,953	1/1:7,6:13:32.77:531,33,0	1/1:4,13:17:30.01:582,30,0	1/1:8,7:15:26.24:518,26,0	0/0:26,0:26:75.15:0,75,952	1/1:2,0:23:40.89:354,41,0	0/0:17,0:17:41.72:0,42,488
chr10	103574969	.	T	TTG	2223.68	PASS	AB=0.942;AC=21;AF=0.375;AN=56;BaseQRankSum=10.454;DP=523;FS=0.415;HRun=0;HaplotypeScore=121.1808;InbreedingCoeff=0.5940;MQ=62.48;MQ0=8;MQRankSum=-8.917;QD=11.06;ReadPosRankSum=1.130;VQSLOD=3.3469;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,1:17:6.24:82,6,0	1/1:6,0:6:11.77:106,12,0	0/0:18,0:3:2.58:0,3,45	0/0:35,0:18:16.43:0,16,185	0/0:21,0:21:59.50:0,59,797	1/1:12,1:13:25.60:255,26,0	1/1:10,2:12:1.46:159,1,0	0/0:22,0:22:48.94:0,49,595	1/1:22,1:23:35.93:295,36,0	0/0:24,0:24:72.20:0,72,1036	0/0:12,0:12:36.11:0,36,531	0/1:10,0:11:8.03:87,0,8	0/1:13,1:13:5.43:108,0,5	1/1:19,0:20:26.51:335,27,0	0/0:22,0:22:63.19:0,63,922	0/0:18,0:18:50.98:0,51,721	0/0:25,0:24:69.20:0,69,991	0/1:11,1:10:27.01:94,0,27	0/0:23,0:22:47.82:0,48,563	0/1:17,0:16:4.33:4,0,240	0/0:10,0:8:20.98:0,21,244	0/0:27,0:27:78.13:0,78,1106	1/1:8,6:15:23.34:359,23,0	0/1:14,1:14:7.96:209,0,8	1/1:13,10:25:17.33:325,17,0	0/0:29,0:29:84.27:0,84,1247	0/0:26,0:26:44.12:0,44,429	0/0:10,0:10:27.09:0,27,413
chr10	103574979	.	GT	G	985.37	PASS	AB=0.979;AC=10;AF=0.179;AN=56;BaseQRankSum=5.625;DP=514;FS=22.106;HRun=9;HaplotypeScore=109.0711;InbreedingCoeff=0.6778;MQ=62.53;MQ0=5;MQRankSum=-0.429;QD=8.57;ReadPosRankSum=-1.361;VQSLOD=0.2954;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:17:5.63:6,0,47	0/0:5,0:5:8.64:0,9,46	0/0:17,0:2:5.98:0,6,55	0/0:29,0:15:12.01:0,12,118	0/0:20,0:20:54.15:0,54,615	0/0:12,0:12:8.95:0,9,58	0/0:15,0:15:12.42:0,12,92	1/1:10,17:27:53.04:471,53,0	0/0:22,0:22:18.91:0,19,120	0/0:22,0:22:66.18:0,66,740	0/0:11,0:11:33.10:0,33,381	0/0:9,0:9:8.90:0,9,60	0/0:13,0:12:9.98:0,10,66	0/0:20,0:20:20.54:0,21,139	0/0:28,0:28:75.17:0,75,823	0/0:20,0:20:31.58:0,32,477	0/0:23,0:23:69.20:0,69,795	0/0:11,0:10:11.32:0,11,79	1/1:11,10:21:22.41:290,22,0	1/1:14,2:15:25.30:204,25,0	1/1:5,5:8:15.01:137,15,0	0/0:26,0:26:68.50:0,69,733	0/0:17,0:17:18.60:0,19,104	0/0:14,0:13:10.25:0,10,57	0/0:23,0:23:21.63:0,22,115	0/0:32,0:32:93.27:0,93,1066	0/1:22,1:23:40.34:40,0,91	0/0:10,0:10:18.05:0,18,208
chr10	103577505	.	A	AATAT	7899.76	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=0.500;DP=501;FS=2.954;HRun=0;HaplotypeScore=105.7909;InbreedingCoeff=0.9220;MQ=66.05;MQ0=3;MQRankSum=0.939;QD=28.11;ReadPosRankSum=0.328;VQSLOD=4.6468;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:24:36.12:919,36,0	1/1:3,10:13:24.08:612,24,0	0/0:17,0:15:6.92:0,7,188	0/0:19,0:16:6.22:0,6,134	0/0:19,0:19:45.10:0,45,723	1/1:2,19:20:39.13:995,39,0	1/1:3,7:11:21.07:533,21,0	1/1:7,0:35:75.41:377,75,0	1/1:2,9:13:23.87:535,24,0	0/0:17,0:17:51.15:0,51,809	0/0:16,0:16:33.10:0,33,547	1/1:2,5:7:6.02:153,6,0	1/1:0,11:11:24.08:612,24,0	1/1:2,1:3:3.01:77,3,0	0/0:21,0:21:54.17:0,54,906	0/0:13,0:13:36.12:0,36,606	0/0:37,0:37:90.15:0,90,1441	1/1:0,20:21:44.94:1046,45,0	1/1:5,0:22:50.43:238,50,0	1/1:4,0:30:56.14:261,56,0	1/1:1,0:7:13.99:64,14,0	0/0:26,0:26:63.20:0,63,1068	1/1:4,6:9:15.03:330,15,0	1/1:1,6:7:12.04:306,12,0	1/1:1,13:17:24.08:613,24,0	0/0:19,0:19:54.18:0,54,944	1/1:3,0:26:50.26:228,50,0	0/0:14,0:14:39.12:0,39,655
chr10	103577616	.	AC	A	5489.37	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=12.380;DP=512;FS=0.391;HRun=1;HaplotypeScore=73.2711;InbreedingCoeff=0.9911;MQ=70.03;MQ0=0;MQRankSum=-5.927;QD=34.96;ReadPosRankSum=3.774;VQSLOD=4.9970;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:57.19:796,57,0	1/1:0,6:6:15.05:210,15,0	0/0:16,0:16:48.14:0,48,727	0/0:12,0:12:36.12:0,36,575	0/0:35,0:35:99:0,105,1630	1/1:0,20:20:51.17:713,51,0	1/1:0,6:6:18.06:252,18,0	0/0:40,0:40:99:0,117,1843	1/1:0,16:16:39.10:524,39,0	0/0:30,0:30:90.31:0,90,1439	0/0:17,0:17:51.16:0,51,781	1/1:0,14:14:42.14:587,42,0	1/1:0,12:12:27.09:377,27,0	1/1:0,13:13:24.08:335,24,0	0/0:21,0:21:63.17:0,63,937	0/0:19,1:20:57.18:0,57,882	0/0:21,0:21:63.20:0,63,979	1/1:0,9:9:27.05:356,27,0	0/0:14,0:14:42.14:0,42,671	0/0:28,0:28:72.24:0,72,1149	0/0:9,0:9:21.07:0,21,335	0/0:22,0:22:66.23:0,66,1054	1/1:0,16:16:36.12:503,36,0	1/1:0,4:4:12:146,12,0	1/1:0,18:18:51.13:691,51,0	0/0:31,0:31:93.32:0,93,1487	0/0:22,0:22:60.20:0,60,953	0/0:17,0:17:51.17:0,51,812
chr10	103577732	.	G	GACA	9043.63	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-5.243;DP=514;FS=4.469;HRun=0;HaplotypeScore=76.0658;InbreedingCoeff=0.9978;MQ=58.14;MQ0=1;MQRankSum=-12.897;QD=55.82;ReadPosRankSum=2.639;VQSLOD=7.0063;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:51.18:1141,51,0	1/1:1,8:9:27.06:563,27,0	0/0:28,0:28:77.98:0,78,1178	0/0:31,0:29:83.93:0,84,1304	0/0:29,0:29:87.30:0,87,1444	1/1:0,13:13:36.12:814,36,0	1/1:0,16:15:39.13:882,39,0	0/0:24,0:23:66.23:0,66,1098	1/1:3,11:14:33.11:743,33,0	0/0:25,0:25:72.25:0,72,1195	0/0:14,0:14:42.14:0,42,697	1/1:1,20:21:54.19:1220,54,0	1/1:0,12:12:36.12:813,36,0	1/1:2,10:14:30.10:677,30,0	0/0:21,0:21:57.19:0,57,947	0/0:24,0:24:69.24:0,69,1149	0/0:35,0:35:99:0,99,1632	1/1:1,8:10:24.08:543,24,0	0/0:13,0:11:30.06:0,30,465	0/0:12,0:12:36.11:0,36,573	0/0:16,0:16:48.16:0,48,799	0/0:20,0:20:60.21:0,60,1000	1/1:0,9:10:27.09:610,27,0	1/1:1,9:10:18.02:358,18,0	1/1:0,12:12:30.10:679,30,0	0/0:33,0:33:99:0,99,1648	0/0:18,0:17:54.18:0,54,899	0/0:9,0:9:27.09:0,27,450
chr10	103578573	.	AGT	A	640.53	PASS	AB=0.940;AC=24;AF=0.462;AN=52;BaseQRankSum=1.979;DP=500;FS=4.489;HRun=0;HaplotypeScore=77.9707;InbreedingCoeff=0.2843;MQ=59.68;MQ0=18;MQRankSum=1.370;QD=2.53;ReadPosRankSum=-0.408;VQSLOD=1.4565;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:35.64:0,36,360	0/0:4,0:5:3:0,3,26	1/1:8,0:4:1.25:3,1,0	./.	1/1:11,0:11:3:32,3,0	0/1:16,1:17:14.09:14,0,200	0/0:19,0:24:3:0,3,26	0/0:32,0:31:5.93:0,6,40	0/0:17,0:20:2.78:0,3,26	1/1:18,4:21:12.03:128,12,0	1/1:8,2:10:3.01:32,3,0	./.	0/0:8,0:10:2.60:0,3,10	0/0:11,0:10:3:0,3,26	1/1:11,2:16:17.71:153,18,0	1/1:8,6:13:14.87:142,15,0	0/1:22,2:25:19.24:19,0,253	0/0:20,0:16:8.98:0,9,99	0/1:17,1:18:34.40:55,0,34	0/1:15,1:15:26.09:26,0,27	0/1:21,0:20:2.12:2,0,100	0/0:17,0:17:12.03:0,12,153	0/0:17,0:17:2.60:0,3,42	0/0:18,0:20:3:0,3,26	0/1:19,0:26:0:0,0,0	1/1:14,2:17:8.86:78,9,0	1/1:12,2:13:6.01:64,6,0	1/1:12,1:12:5.85:46,6,0
chr10	103579344	.	T	TGACCAAGAACCACTGCCCCCT	23941.82	PASS	AB=0.844;AC=52;AF=0.963;AN=54;BaseQRankSum=0.309;DP=251;FS=43.493;HRun=0;HaplotypeScore=311.1566;InbreedingCoeff=-0.0570;MQ=70.63;MQ0=0;MQRankSum=-3.135;QD=97.72;ReadPosRankSum=2.758;VQSLOD=2.9759;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:24.08:1274,24,0	1/1:4,0:4:9.03:607,9,0	0/1:5,0:5:56.15:315,0,56	0/1:6,1:11:0.53:1302,0,1	1/1:8,0:8:12.03:420,12,0	1/1:10,0:10:15.05:904,15,0	1/1:11,0:11:15.05:998,15,0	1/1:6,0:6:15.05:760,15,0	1/1:17,0:17:37.02:1594,37,0	1/1:8,0:8:12.04:529,12,0	1/1:5,0:5:15.04:594,15,0	1/1:10,0:10:18.06:817,18,0	1/1:12,0:12:18.06:1151,18,0	1/1:18,0:18:36.12:1896,36,0	1/1:10,0:10:18.06:757,18,0	1/1:7,0:7:15.05:672,15,0	1/1:5,0:5:12.04:547,12,0	1/1:6,0:6:3.01:199,3,0	1/1:3,0:3:6.02:208,6,0	1/1:9,0:9:21.07:752,21,0	1/1:14,0:14:27.55:1310,28,0	1/1:9,0:9:15.04:677,15,0	1/1:4,0:4:6.02:419,6,0	1/1:11,0:11:21.07:820,21,0	1/1:3,0:3:9.03:488,9,0	1/1:13,0:13:30.10:1776,30,0	1/1:14,0:14:42.14:2156,42,0	./.
chr10	103579771	.	AAC	A	4319.94	PASS	AB=0.926;AC=11;AF=0.196;AN=56;BaseQRankSum=7.438;DP=967;FS=0.712;HRun=0;HaplotypeScore=141.4852;InbreedingCoeff=0.8865;MQ=53.42;MQ0=11;MQRankSum=1.323;QD=19.55;ReadPosRankSum=-0.769;VQSLOD=4.9697;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,1:55:88.86:0,89,1908	0/0:12,0:12:26.45:0,26,394	0/0:31,0:16:37.86:0,38,509	0/0:52,0:24:44.82:0,45,682	0/0:27,0:27:69.19:0,69,1006	0/0:25,1:26:25.68:0,26,915	0/0:41,0:41:5.89:0,6,1070	1/1:14,32:46:87.20:1045,87,0	0/0:33,0:33:84.26:0,84,1329	0/0:36,0:36:60.44:0,60,1415	0/0:15,0:15:42.12:0,42,611	0/0:41,0:41:21.61:0,22,1331	0/0:29,0:29:72.24:0,72,1156	0/0:44,0:44:99:0,117,1823	0/0:29,0:29:66.14:0,66,1023	0/0:37,0:37:61.93:0,62,1456	0/0:42,0:42:99:0,114,1828	0/0:29,0:28:68.86:0,69,1080	1/1:7,10:15:30.05:357,30,0	1/1:7,21:28:51.03:585,51,0	1/1:33,44:73:99:1815,159,0	0/0:31,2:33:9.22:0,9,1070	0/0:21,0:21:54.16:0,54,845	0/0:50,0:50:94.89:0,95,2058	0/0:25,0:25:16.47:0,16,721	0/0:38,0:38:99:0,102,1547	1/1:6,22:28:42.13:516,42,0	0/1:23,2:25:2.81:3,0,995
chr10	103581529	.	C	CTT	2190	PASS	AB=0.671;AC=28;AF=0.500;AN=56;BaseQRankSum=7.420;DP=556;FS=2.344;HRun=12;HaplotypeScore=98.0275;InbreedingCoeff=0.2357;MQ=73.03;MQ0=0;MQRankSum=-2.813;QD=5.82;ReadPosRankSum=-2.662;VQSLOD=0.1065;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:11,1:47:26.94:241,0,27	1/1:1,0:4:2.50:9,2,0	0/1:18,0:14:6.03:6,0,68	0/1:15,0:14:41.23:41,0,45	0/0:16,0:23:37.11:0,37,359	0/1:8,0:21:31.32:31,0,66	0/1:7,0:21:23.81:79,0,24	1/1:8,10:20:35.86:346,36,0	1/1:4,0:16:13.32:50,13,0	0/0:15,0:15:28.95:0,29,250	0/0:10,0:12:16.29:0,16,172	1/1:5,0:18:22.46:78,22,0	0/1:5,0:21:6.12:52,0,6	0/1:5,0:14:32.05:37,0,32	0/0:24,0:28:40.85:0,41,540	0/0:19,0:22:23.74:0,24,264	0/0:22,0:24:53.64:0,54,530	0/1:6,4:22:24.28:180,0,24	1/1:12,4:19:31.50:290,32,0	1/1:5,6:14:22.92:201,23,0	1/1:9,7:16:12.94:148,13,0	0/0:15,0:16:40.48:0,40,366	0/1:5,1:24:32.55:158,0,33	1/1:5,0:20:2.56:67,3,0	0/1:8,0:24:21.68:100,0,22	0/0:30,0:30:47.89:0,48,444	1/1:6,12:19:4.66:268,5,0	0/0:8,0:10:16.80:0,17,149
chr10	103583627	.	G	GGTGT	1681.27	PASS	AB=0.941;AC=30;AF=0.600;AN=50;BaseQRankSum=0.293;DP=615;FS=2.067;HRun=0;HaplotypeScore=148.8673;InbreedingCoeff=0.3786;MQ=64.92;MQ0=7;MQRankSum=-2.390;QD=4.23;ReadPosRankSum=-1.838;VQSLOD=2.6377;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:9.03:172,9,0	1/1:7,0:7:3.01:67,3,0	./.	./.	0/0:20,0:20:3.01:0,3,45	0/1:14,0:14:0.27:0,0,0	0/1:35,0:35:10.84:153,0,11	1/1:26,0:25:2.96:19,3,0	1/1:12,0:12:9.03:171,9,0	0/0:25,0:25:10.05:0,10,158	0/0:11,0:11:3.01:0,3,46	1/1:13,0:17:6.02:109,6,0	1/1:14,0:14:5.96:43,6,0	1/1:24,0:23:6:112,6,0	0/0:20,0:22:8.63:0,9,99	0/0:11,0:10:6.02:0,6,92	0/0:24,0:29:25.67:0,26,295	1/1:23,0:23:35.97:466,36,0	./.	1/1:16,0:16:2.94:18,3,0	1/1:49,0:47:6.02:84,6,0	0/0:15,0:15:5.80:0,6,92	1/1:19,0:19:3.01:68,3,0	0/1:31,12:45:17.95:64,0,18	1/1:21,0:21:15.03:256,15,0	0/0:19,0:19:0.70:0,1,42	1/1:21,0:26:5.37:24,5,0	0/1:11,0:11:11.62:12,0,47
chr10	103584361	.	A	AGAG	735.74	PASS	AB=0.989;AC=14;AF=0.250;AN=56;BaseQRankSum=11.911;DP=716;FS=3.964;HRun=0;HaplotypeScore=199.9680;InbreedingCoeff=0.0480;MQ=41.83;MQ0=17;MQRankSum=-9.191;QD=3.27;ReadPosRankSum=-2.335;VQSLOD=2.4090;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:7.88:0,8,178	0/1:6,0:6:30.79:31,0,59	0/0:25,0:6:15.04:0,15,200	0/0:29,0:7:3.75:0,4,37	0/0:36,0:36:10.23:0,10,913	0/0:20,0:18:17.80:0,18,252	0/1:29,0:26:29.89:30,0,124	0/1:16,0:10:33.73:53,0,34	0/1:12,0:12:37.20:37,0,43	0/0:49,0:48:95.86:0,96,1600	0/1:24,0:24:1.21:1,0,418	0/0:24,0:23:27.48:0,27,331	0/0:23,0:23:9.23:0,9,290	0/0:17,0:17:4.06:0,4,59	0/0:42,0:41:99:0,120,1708	0/0:30,0:30:69.20:0,69,1030	0/0:35,0:35:41.84:0,42,1044	0/1:24,0:23:65.80:66,0,226	0/1:10,0:7:5.81:151,0,6	1/1:15,0:15:17.75:146,18,0	0/1:30,4:33:2:212,0,2	0/0:33,0:33:41.34:0,41,744	0/1:17,0:17:26.79:27,0,162	0/0:34,0:32:4.80:0,5,77	0/1:25,0:23:9.12:9,0,180	0/0:40,0:40:11.49:0,11,1270	1/1:12,0:11:9.10:127,9,0	0/0:8,0:7:0.17:0,0,186
chr10	103584367	.	GGAAGAA	G	3457.68	PASS	AB=0.982;AC=21;AF=0.375;AN=56;BaseQRankSum=9.996;DP=712;FS=6.520;HRun=0;HaplotypeScore=219.0979;InbreedingCoeff=-0.1799;MQ=41.59;MQ0=14;MQRankSum=-7.500;QD=8.64;ReadPosRankSum=-5.731;VQSLOD=0.6262;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:47,0:47:99:132,0,213	0/1:6,0:6:35.84:57,0,36	0/0:17,0:7:21.04:0,21,369	0/0:23,0:5:9.47:0,9,173	0/0:35,1:36:66.39:0,66,1557	0/1:17,0:15:87.47:87,0,228	0/1:27,1:24:99:194,0,122	0/1:15,0:8:24.03:126,0,24	0/1:15,0:15:46.70:353,0,47	0/0:56,1:56:2.13:0,2,3271	0/1:22,3:26:99:220,0,978	0/1:23,0:22:99:176,0,346	0/1:20,0:20:99:197,0,323	0/1:18,0:18:26.79:27,0,97	0/0:44,0:43:93.93:0,94,3099	0/0:29,0:29:75.23:0,75,2179	0/0:35,0:35:55.89:0,56,1985	0/1:23,1:23:99:153,0,312	0/1:10,0:7:8.21:206,0,8	1/1:11,3:14:38.90:511,39,0	1/1:15,18:32:38.14:438,38,0	0/1:31,1:32:99:115,0,1338	0/0:15,0:15:1.89:0,2,223	0/1:35,0:34:33.51:34,0,154	0/1:24,1:24:99:135,0,171	0/0:40,0:39:94.01:0,94,2709	1/1:12,0:11:21.21:296,21,0	0/0:13,0:13:18.53:0,19,566
chr10	103584373	.	A	AGAGGAG	12277.93	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=5.299;DP=708;FS=76.797;HRun=0;HaplotypeScore=191.5064;InbreedingCoeff=0.5513;MQ=41.87;MQ0=15;MQRankSum=-6.014;QD=25.37;ReadPosRankSum=-1.762;VQSLOD=1.1455;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,38:43:36.12:1133,36,0	1/1:4,1:6:4.29:302,4,0	0/0:21,0:8:18.03:0,18,315	0/0:25,0:6:14.81:0,15,185	0/0:35,0:35:48.18:0,48,996	1/1:13,4:16:36.04:812,36,0	1/1:21,5:23:29.22:706,29,0	0/1:15,0:7:25.30:68,0,25	1/1:11,5:16:42.12:1074,42,0	0/1:62,0:61:28.06:28,0,2386	0/1:25,0:25:99:310,0,663	1/1:18,8:25:63:1575,63,0	1/1:15,4:19:27.66:856,28,0	1/1:4,17:21:11.14:692,11,0	0/0:41,0:40:99:0,116,2062	0/0:29,0:29:75.18:0,75,1551	0/0:31,0:32:23.95:0,24,1255	1/1:14,6:22:49.06:1057,49,0	1/1:8,0:6:13.78:332,14,0	1/1:16,0:16:26.82:490,27,0	1/1:29,4:32:20.55:379,21,0	0/1:27,0:27:72.96:73,0,951	1/1:12,4:16:36.75:628,37,0	1/1:4,30:36:19.07:664,19,0	1/1:19,4:21:26.70:806,27,0	0/0:41,0:40:62.75:0,63,1862	1/1:11,0:11:3.43:278,3,0	0/1:14,0:14:13.78:14,0,441
chr10	103584526	.	GA	G	3536.49	PASS	AB=0.754;AC=17;AF=0.304;AN=56;BaseQRankSum=1.869;DP=672;FS=13.515;HRun=2;HaplotypeScore=256.0924;InbreedingCoeff=-0.1643;MQ=50.23;MQ0=11;MQRankSum=-3.590;QD=9.69;ReadPosRankSum=2.178;VQSLOD=-0.3532;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:4,18:22:2.47:502,0,2	0/1:12,8:19:88.37:169,0,88	0/0:27,0:13:10.04:0,10,361	0/0:29,0:13:25.51:0,26,272	0/1:24,0:24:22.93:23,0,431	0/1:14,5:19:88.70:110,0,89	0/1:20,16:34:99:339,0,193	0/0:39,0:27:62.68:0,63,791	0/1:11,8:18:0.89:251,0,1	0/0:37,0:35:93.02:0,93,1235	0/0:12,0:12:23.99:0,24,290	0/1:12,14:24:4.70:281,0,5	0/1:12,9:21:69.15:207,0,69	0/1:8,9:17:44.28:277,0,44	0/0:34,0:33:52.45:0,52,771	0/0:21,4:25:24.45:0,24,615	0/0:12,1:13:7.35:0,7,335	0/1:7,16:23:53.63:386,0,54	0/1:19,2:15:6.54:7,0,380	0/1:17,1:18:2.24:2,0,287	0/0:39,3:41:53.50:0,54,979	0/1:26,2:28:4.15:4,0,483	0/1:10,10:20:75.48:334,0,75	1/1:10,12:22:4.40:413,4,0	0/1:22,7:26:99:231,0,119	0/0:38,0:37:89.86:0,90,1252	0/0:5,0:5:8.33:0,8,170	0/0:5,0:5:2.91:0,3,94
chr10	103584531	.	GT	G	1130.93	PASS	AB=0.856;AC=20;AF=0.357;AN=56;BaseQRankSum=12.729;DP=520;FS=106.823;HRun=1;HaplotypeScore=191.0208;InbreedingCoeff=-0.5532;MQ=54.33;MQ0=8;MQRankSum=-8.552;QD=3.45;ReadPosRankSum=-2.710;VQSLOD=-0.1036;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:44.81:0,45,570	0/1:12,2:14:81.11:81,0,213	0/0:27,0:13:11.97:0,12,284	0/0:30,0:13:13.77:0,14,305	0/1:12,3:15:32.94:33,0,349	0/1:10,6:16:94.85:95,0,134	0/1:24,4:29:99:115,0,424	0/0:30,0:22:43.50:0,43,651	0/1:7,4:11:27.32:27,0,190	0/0:25,0:30:31.88:0,32,992	0/0:6,1:8:9.07:0,9,249	0/1:16,3:17:46.38:46,0,216	0/1:10,2:13:51.11:51,0,137	0/1:10,3:13:99:136,0,243	0/1:20,2:22:72.54:73,0,704	0/1:17,1:18:91.21:91,0,438	0/1:10,1:11:18.64:19,0,307	0/1:15,2:17:41.68:42,0,435	0/0:18,0:13:10.54:0,11,460	0/1:13,1:15:42.18:42,0,245	0/1:33,3:36:42.72:43,0,714	0/1:14,2:18:99:108,0,208	0/1:13,1:15:34.93:35,0,318	0/1:12,3:15:50.34:50,0,387	0/1:13,9:21:99:163,0,224	0/0:26,0:28:60.40:0,60,1138	0/1:5,0:5:3.07:3,0,177	0/1:1,1:2:35.88:36,0,42
chr10	103584623	.	A	AAG	650.16	PASS	AB=0.963;AC=13;AF=0.232;AN=56;BaseQRankSum=-0.153;DP=465;FS=8.032;HRun=0;HaplotypeScore=334.0523;InbreedingCoeff=-0.1495;MQ=29.96;MQ0=7;MQRankSum=-1.616;QD=3.80;ReadPosRankSum=0.749;VQSLOD=1.0521;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:46.70:47,0,48	0/1:5,0:5:8.22:8,0,43	0/0:11,0:3:6.02:0,6,97	0/0:14,0:3:6.01:0,6,74	0/0:17,1:18:5.23:0,5,372	0/1:11,0:12:99:115,0,115	0/1:9,0:8:1.57:2,0,40	0/0:21,0:16:42.09:0,42,483	0/1:15,0:15:48.74:117,0,49	0/1:38,2:40:99:126,0,867	0/0:17,0:16:9.64:0,10,208	0/1:17,0:17:46.39:92,0,46	0/1:18,0:18:23.62:24,0,160	0/1:15,2:17:99:125,0,198	0/0:31,0:32:59.16:0,59,704	0/0:24,0:24:26.30:0,26,520	0/0:13,0:13:32.62:0,33,277	0/0:7,0:7:17.44:0,17,109	0/0:14,0:12:32.97:0,33,393	0/1:5,0:5:8.34:74,0,8	0/0:29,0:29:30.19:0,30,398	0/0:23,1:23:20.05:0,20,527	0/1:10,0:10:10.87:11,0,88	0/0:10,0:10:14.47:0,14,58	1/1:5,0:5:3.09:55,3,0	0/0:43,0:41:99:0,115,1113	0/0:6,0:6:5.77:0,6,27	0/0:10,0:9:21.05:0,21,279
chr10	103584624	.	G	GC	2210.32	PASS	AB=0.892;AC=20;AF=0.357;AN=56;BaseQRankSum=3.824;DP=475;FS=56.082;HRun=0;HaplotypeScore=321.8129;InbreedingCoeff=-0.4519;MQ=29.99;MQ0=8;MQRankSum=-1.156;QD=7.13;ReadPosRankSum=2.924;VQSLOD=1.7584;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,3:15:66.75:144,0,67	0/1:6,0:5:19.15:19,0,33	0/0:12,0:3:9.03:0,9,124	0/0:18,0:3:6.02:0,6,74	0/0:15,0:18:14.71:0,15,326	0/1:11,1:12:99:131,0,128	0/1:8,1:8:16.29:29,0,16	0/0:21,0:16:42.13:0,42,522	0/1:11,4:15:84.17:164,0,84	0/1:41,1:40:99:107,0,812	0/0:16,0:17:18.09:0,18,164	0/1:15,2:17:99:139,0,107	0/1:13,6:19:99:230,0,146	0/1:17,0:17:81.59:82,0,156	0/1:24,7:32:99:380,0,507	0/1:17,6:24:99:315,0,429	0/1:12,3:15:99:147,0,183	0/1:7,0:7:2.07:2,0,112	0/0:14,0:12:33.09:0,33,378	0/1:5,0:5:19.16:19,0,26	0/0:28,1:29:25.03:0,25,328	0/0:23,0:23:47.14:0,47,524	0/1:8,1:10:20.79:21,0,101	0/1:9,1:10:32.17:32,0,35	1/1:5,0:5:0.10:4,0,0	0/1:36,6:42:99:382,0,888	0/1:5,1:6:18.41:18,0,45	0/0:10,0:9:21.06:0,21,267
chr10	103584625	.	A	AAG	1709.22	PASS	AB=0.878;AC=16;AF=0.286;AN=56;BaseQRankSum=2.985;DP=516;FS=7.507;HRun=0;HaplotypeScore=360.2031;InbreedingCoeff=-0.1652;MQ=29.78;MQ0=8;MQRankSum=-2.546;QD=8.06;ReadPosRankSum=-2.119;VQSLOD=2.0033;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,2:17:6.38:191,0,6	0/1:8,0:7:14.74:29,0,15	0/0:14,0:3:9.03:0,9,130	0/0:19,0:3:6:0,6,68	0/0:20,0:20:22.28:0,22,356	0/1:9,4:13:56.98:242,0,57	0/1:11,0:10:29.98:30,0,90	0/0:22,0:16:38.88:0,39,384	0/1:11,5:17:12:276,0,12	0/0:45,0:43:45.34:0,45,681	0/0:18,0:17:16.55:0,17,223	0/1:13,4:17:26.08:209,0,26	0/1:18,3:20:28.76:210,0,29	0/1:16,2:18:73.45:73,0,140	0/0:32,0:33:36.11:0,36,580	0/0:23,0:24:50.39:0,50,544	0/0:15,0:16:28.86:0,29,221	0/1:6,0:8:22.31:30,0,22	0/1:16,0:14:11.69:12,0,181	1/1:5,2:7:8.87:133,9,0	0/1:31,0:32:99:136,0,185	0/0:26,0:25:39.10:0,39,436	0/1:8,2:10:46.63:149,0,47	0/0:10,0:10:3.67:0,4,29	0/1:6,2:8:1.21:96,0,1	0/0:42,0:42:99:0,104,878	0/1:7,0:7:11.42:53,0,11	0/0:11,0:10:20.29:0,20,249
chr10	103584653	.	AGGAG	A	219.01	PASS	AB=0.847;AC=3;AF=0.054;AN=56;BaseQRankSum=3.857;DP=772;FS=50.035;HRun=0;HaplotypeScore=468.2856;InbreedingCoeff=-0.0597;MQ=32.77;MQ0=20;MQRankSum=-3.384;QD=4.56;ReadPosRankSum=1.470;VQSLOD=-0.1408;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,2:22:31.20:31,0,956	0/0:9,0:9:20.70:0,21,248	0/0:43,0:5:14.98:0,15,278	0/0:52,0:8:14.61:0,15,413	0/0:29,0:29:61.22:0,61,1374	0/0:20,0:20:13.80:0,14,929	0/0:26,1:25:38.26:0,38,684	0/0:16,0:13:35.15:0,35,476	0/0:26,1:27:17.66:0,18,1264	0/0:57,0:56:99:0,154,2834	0/0:28,0:27:69.57:0,70,1250	0/0:32,0:31:79.34:0,79,1347	0/0:20,0:19:35.38:0,35,879	0/0:26,0:27:74.23:0,74,1328	0/0:45,0:44:99:0,124,2494	0/0:32,0:32:95.78:0,96,2120	0/0:28,0:28:36.46:0,36,1661	0/1:8,4:12:99:227,0,162	0/0:24,0:16:44.77:0,45,787	0/0:8,0:8:17.23:0,17,243	0/0:43,0:42:27.81:0,28,797	0/0:36,0:34:58:0,58,1184	0/0:14,0:14:34.27:0,34,499	0/1:12,2:14:61.14:61,0,419	0/0:11,0:11:24.05:0,24,437	0/0:60,0:57:99:0,139,3707	0/0:18,0:18:45.07:0,45,898	0/0:15,0:15:45.12:0,45,1047
chr10	103584684	.	AGAG	A	2840.23	PASS	AB=0.885;AC=10;AF=0.179;AN=56;BaseQRankSum=0.264;DP=993;FS=12.584;HRun=0;HaplotypeScore=488.9691;InbreedingCoeff=0.4951;MQ=40.29;MQ0=19;MQRankSum=0.241;QD=14.42;ReadPosRankSum=-1.079;VQSLOD=2.8900;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:76.89:0,77,1420	0/0:14,0:14:35.98:0,36,470	0/0:32,0:12:13.13:0,13,309	0/0:25,0:7:8.70:0,9,188	0/0:39,0:38:30.60:0,31,807	0/1:30,0:29:12.77:13,0,812	0/0:45,0:42:75.55:0,76,1354	1/1:13,10:20:23.88:537,24,0	0/0:39,0:38:68.09:0,68,1131	0/0:73,0:70:7.20:0,7,1981	0/0:30,0:30:46.76:0,47,571	0/0:40,0:39:47.03:0,47,1046	0/0:26,0:24:32.68:0,33,469	0/0:43,0:41:88.89:0,89,1238	0/0:51,0:49:84.43:0,84,1310	0/0:46,0:45:86.79:0,87,1358	0/0:40,0:40:58.18:0,58,1574	0/1:18,0:18:3.81:4,0,525	0/1:22,4:22:29.03:336,0,29	1/1:8,3:11:3.16:263,3,0	1/1:43,19:58:81.29:1155,81,0	0/0:36,0:36:26.06:0,26,985	0/0:21,0:21:46.52:0,47,659	0/0:34,0:34:15.81:0,16,841	0/0:28,0:28:58.07:0,58,985	0/0:74,0:70:99:0,150,2329	0/1:14,13:26:5.41:683,0,5	0/0:23,0:23:53.92:0,54,1021
chr10	103589987	.	ATTT	A	6828.34	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=15.939;DP=608;FS=7.175;HRun=11;HaplotypeScore=130.1612;InbreedingCoeff=0.9680;MQ=64.82;MQ0=3;MQRankSum=-3.094;QD=20.95;ReadPosRankSum=4.152;VQSLOD=2.7914;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:35.17:426,35,0	1/1:12,0:12:26.87:215,27,0	0/0:21,0:11:26.31:0,26,313	0/0:19,0:15:27:0,27,317	0/0:34,0:34:93.26:0,93,1838	1/1:27,0:27:12.85:410,13,0	1/1:16,0:16:35.95:317,36,0	1/1:6,16:22:51.15:668,51,0	1/1:20,0:20:53.91:464,54,0	0/0:37,0:37:99:0,105,1941	0/0:22,0:23:66.20:0,66,1261	1/1:18,0:18:41.87:348,42,0	1/1:17,0:17:38.84:317,39,0	1/1:15,0:15:29.81:230,30,0	0/0:18,0:18:42.06:0,42,753	0/0:30,0:31:87.28:0,87,1662	0/0:35,0:34:90.27:0,90,1724	1/1:18,0:18:24.06:317,24,0	1/1:5,16:21:45.12:588,45,0	1/1:7,20:27:63.18:814,63,0	1/1:0,3:3:3:39,3,0	0/0:13,0:13:36.12:0,36,728	1/1:19,0:19:30.66:260,31,0	1/1:10,0:10:14.66:116,15,0	1/1:26,0:26:62.71:520,63,0	0/0:31,0:34:87.28:0,87,1620	1/1:5,18:23:60.18:778,60,0	0/0:16,0:17:45.13:0,45,855
chr10	103589996	.	TTTC	T	9614.87	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=14.278;DP=612;FS=7.433;HRun=0;HaplotypeScore=121.4230;InbreedingCoeff=0.8881;MQ=66.24;MQ0=4;MQRankSum=-8.332;QD=29.86;ReadPosRankSum=6.018;VQSLOD=4.8649;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:63.05:965,63,0	1/1:0,13:13:32.91:478,33,0	0/0:28,0:13:33.61:0,34,379	0/0:24,0:19:28.06:0,28,335	0/0:37,0:37:99:0,111,2156	1/1:0,27:27:57.19:924,57,0	1/1:0,17:17:36.12:582,36,0	1/1:21,0:21:26.34:302,26,0	1/1:0,22:22:54.18:870,54,0	0/0:35,0:35:99:0,105,2153	0/0:24,0:24:72.16:0,72,1421	1/1:0,18:18:45.11:700,45,0	1/1:0,15:15:39.13:631,39,0	1/1:0,13:13:33.07:505,33,0	0/0:19,0:19:57.04:0,57,990	0/0:31,0:31:93.26:0,93,1870	0/0:32,0:31:96.19:0,96,1962	1/1:1,19:20:45.10:701,45,0	1/1:22,0:22:26.66:314,27,0	0/1:28,0:28:0.44:412,0,0	0/1:6,0:6:11.36:11,0,23	0/0:15,0:15:45.07:0,45,887	1/1:0,17:17:29.31:529,29,0	1/1:0,7:7:15.05:243,15,0	1/1:0,23:23:69.11:1054,69,0	0/0:30,0:30:90.28:0,90,1793	1/1:26,0:26:14.25:394,14,0	0/0:15,0:15:45.14:0,45,949
chr10	103590000	.	GT	G	2035.18	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=1.907;DP=617;FS=15.016;HRun=8;HaplotypeScore=126.6636;InbreedingCoeff=0.8763;MQ=67.60;MQ0=4;MQRankSum=-6.992;QD=15.78;ReadPosRankSum=-4.022;VQSLOD=1.5633;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:65.27:0,65,478	0/0:14,0:14:35.56:0,36,255	0/0:28,0:14:12.88:0,13,115	0/1:25,0:20:25.18:25,0,199	0/0:36,0:36:90.26:0,90,1068	0/0:27,0:27:53.46:0,53,397	0/0:18,0:18:38.29:0,38,271	1/1:7,13:20:36.04:346,36,0	0/0:23,0:23:52.45:0,52,368	0/0:37,0:37:90.27:0,90,1071	0/0:24,0:24:69.20:0,69,816	0/0:19,0:19:43.82:0,44,301	0/0:15,0:15:35.18:0,35,251	0/0:13,0:13:29.79:0,30,228	0/0:19,0:19:51.03:0,51,563	0/0:29,0:29:78.22:0,78,920	0/0:31,0:31:93.29:0,93,1122	0/0:21,0:21:44.64:0,45,332	1/1:9,13:22:39.03:369,39,0	1/1:2,25:27:75.04:701,75,0	1/1:1,6:7:15.02:144,15,0	0/0:16,0:16:45.14:0,45,543	0/0:16,0:16:33.55:0,34,230	0/0:8,0:8:17.78:0,18,130	0/0:23,0:23:56.28:0,56,414	0/0:29,0:29:71.25:0,71,840	1/1:4,24:28:66.08:627,66,0	0/0:14,0:14:42.13:0,42,503
chr10	103592304	.	CT	C	9850.70	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=14.754;DP=669;FS=5.887;HRun=2;HaplotypeScore=64.2330;InbreedingCoeff=0.9993;MQ=70.26;MQ0=0;MQRankSum=-0.618;QD=35.95;ReadPosRankSum=3.016;VQSLOD=5.5343;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,57:57:99:1986,153,0	1/1:0,10:10:30.10:389,30,0	0/0:13,0:13:36.04:0,36,453	0/0:19,0:18:43.14:0,43,561	0/0:28,0:28:81.27:0,81,1214	1/1:0,17:17:42.14:545,42,0	1/1:1,23:24:63.20:818,63,0	0/0:31,0:31:93.27:0,93,1317	1/1:0,22:22:63.20:818,63,0	0/0:30,0:30:90.28:0,90,1280	0/0:20,0:20:60.19:0,60,881	1/1:0,22:22:63.20:818,63,0	1/1:0,14:14:39.13:506,39,0	1/1:1,20:21:60.19:779,60,0	0/0:35,0:35:99:0,105,1551	0/0:19,1:20:21.28:0,21,794	0/0:33,0:33:96.27:0,96,1390	1/1:0,22:22:60.19:778,60,0	0/0:24,0:24:66.21:0,66,969	0/0:24,0:24:72.22:0,72,1041	0/0:35,0:35:99:0,105,1555	0/0:24,0:24:72.23:0,72,1053	1/1:0,18:18:51.17:662,51,0	1/1:0,24:24:69.22:896,69,0	1/1:0,23:23:66.21:857,66,0	0/0:26,0:25:78.26:0,78,1169	0/0:23,0:22:69.23:0,69,1034	0/0:10,0:10:30.09:0,30,431
chr10	103592445	.	T	TG	11431.13	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=-17.224;DP=653;FS=0.940;HRun=4;HaplotypeScore=61.1930;InbreedingCoeff=0.9559;MQ=71.52;MQ0=0;MQRankSum=1.864;QD=35.39;ReadPosRankSum=3.347;VQSLOD=5.2202;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,50:50:99:1969,144,0	1/1:0,14:14:39.13:534,39,0	0/0:27,0:23:34.43:0,34,512	0/1:23,0:23:1.89:2,0,472	0/0:21,0:21:63.15:0,63,702	1/1:1,19:20:57.19:779,57,0	1/1:1,24:25:66.22:903,66,0	0/0:27,0:27:66.18:0,66,749	1/1:0,23:23:69.23:944,69,0	0/0:19,0:19:54.15:0,54,613	0/0:17,0:17:45.13:0,45,510	1/1:2,19:22:60.20:811,60,0	1/1:2,22:24:60.20:820,60,0	1/1:0,21:21:63.21:862,63,0	0/0:30,0:30:87.23:0,87,976	0/0:19,0:19:57.15:0,57,637	0/0:28,0:28:75.17:0,75,837	1/1:0,27:27:75.25:1026,75,0	0/0:21,0:20:57.15:0,57,631	0/0:22,0:22:60.17:0,60,680	0/0:17,0:17:45.13:0,45,511	0/0:24,0:24:69.20:0,69,783	1/1:1,23:24:72.24:975,72,0	1/1:1,28:29:78.26:1067,78,0	1/1:2,19:21:54.18:739,54,0	0/0:21,0:21:54.15:0,54,612	0/0:14,0:14:39.09:0,39,432	0/0:23,0:23:69.18:0,69,772
chr10	103593326	.	C	CAAAA	4668.67	PASS	AB=0.813;AC=34;AF=0.607;AN=56;BaseQRankSum=1.115;DP=521;FS=4.213;HRun=15;HaplotypeScore=104.0519;InbreedingCoeff=0.6866;MQ=44.86;MQ0=8;MQRankSum=-7.924;QD=13.42;ReadPosRankSum=-5.226;VQSLOD=0.7590;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:14,3:41:0.32:396,0,0	1/1:2,0:3:3.01:37,3,0	0/0:9,0:5:1.77:0,2,76	0/0:6,0:5:10.78:0,11,73	0/0:20,0:23:40.61:0,41,450	1/1:5,6:16:17.97:253,18,0	1/1:7,1:17:22.21:234,22,0	1/1:27,0:25:50.66:460,51,0	1/1:6,0:10:21.67:139,22,0	0/0:28,0:29:7.01:0,7,305	0/0:16,0:18:10.28:0,10,240	1/1:15,1:18:41.69:368,42,0	1/1:17,0:19:26.08:205,26,0	1/1:11,0:11:26.67:186,27,0	0/0:17,0:17:28.85:0,29,278	0/1:12,0:14:6.02:6,0,141	0/0:20,0:25:51.55:0,52,474	1/1:16,0:20:35.51:289,36,0	1/1:11,9:20:32.26:400,32,0	1/1:5,3:20:29.95:430,30,0	1/1:6,5:10:6.02:103,6,0	0/0:17,0:17:9.58:0,10,257	1/1:14,0:21:35.12:262,35,0	0/1:8,1:19:79.02:166,0,79	1/1:8,0:19:29.41:251,29,0	0/0:19,0:19:4.75:0,5,350	1/1:15,20:33:29.96:483,30,0	0/0:8,0:6:4.81:0,5,60
chr10	103595799	.	TTGTGTGTGTGTGTGTGTGTGTG	T	4215.55	PASS	AB=1.000;AC=19;AF=0.352;AN=54;BaseQRankSum=7.788;DP=604;FS=12.786;HRun=0;HaplotypeScore=264.7930;InbreedingCoeff=0.7688;MQ=69.47;MQ0=17;MQRankSum=-5.276;QD=21.62;ReadPosRankSum=1.202;VQSLOD=2.2596;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:33.11:0,33,2153	0/0:10,0:10:9.03:0,9,567	./.	0/0:36,0:20:5.05:0,5,69	1/1:12,2:14:8.98:180,9,0	0/0:17,0:24:21.07:0,21,1663	0/0:27,0:27:27.56:0,28,1593	0/1:24,0:23:13.35:13,0,21	0/0:19,0:19:30.10:0,30,2303	0/0:19,0:18:21.07:0,21,1220	0/0:16,0:16:21.07:0,21,1691	0/0:21,0:21:27.09:0,27,1987	0/0:16,0:23:29.46:0,29,1542	0/0:18,0:18:24.08:0,24,1736	1/1:6,10:16:12.04:653,12,0	1/1:12,6:19:18.06:981,18,0	0/0:33,0:32:40.63:0,41,2121	0/0:16,0:17:31.35:0,31,2395	0/0:15,0:15:7.42:0,7,27	1/1:11,0:14:3.01:113,3,0	1/1:39,0:39:2.50:45,3,0	1/1:7,10:17:12.04:694,12,0	0/0:12,0:12:15.05:0,15,1185	0/0:23,0:31:18.01:0,18,1133	0/0:15,0:15:21.07:0,21,1656	1/1:16,6:21:20.39:562,20,0	1/1:13,1:22:9.07:627,9,0	1/1:3,5:8:6.02:347,6,0
chr10	103597646	.	CG	C	1940.42	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=2.762;DP=601;FS=42.064;HRun=4;HaplotypeScore=73.0609;InbreedingCoeff=0.9605;MQ=82.75;MQ0=0;MQRankSum=-2.130;QD=20.86;ReadPosRankSum=4.657;VQSLOD=1.1930;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:84.17:0,84,1051	0/0:5,0:4:15.05:0,15,210	0/0:15,0:15:42.14:0,42,588	0/0:19,0:19:36.83:0,37,603	1/1:3,12:15:38.79:442,39,0	0/0:12,0:12:24.05:0,24,301	0/0:36,0:36:99:0,100,1178	0/0:22,0:23:56.34:0,56,382	0/0:12,0:12:33.03:0,33,376	0/0:21,0:21:42.13:0,42,553	0/0:12,0:12:30.09:0,30,405	0/0:23,0:23:56.92:0,57,623	0/0:30,0:30:75.16:0,75,957	0/0:28,0:28:63.14:0,63,784	1/1:4,11:15:24.07:284,24,0	1/1:6,14:20:30.09:358,30,0	0/0:22,0:22:66.15:0,66,823	0/0:27,0:27:78.22:0,78,1026	0/0:20,0:20:47.46:0,47,322	0/0:21,0:21:49.65:0,50,390	0/0:64,0:64:99:0,164,1244	1/1:1,7:8:18.06:216,18,0	0/0:12,0:12:24.07:0,24,319	0/0:44,0:44:99:0,129,1658	0/0:16,0:16:45.13:0,45,597	1/1:8,16:24:3.59:462,4,0	0/0:11,0:11:32.87:0,33,255	1/1:0,11:11:30.09:360,30,0
chr10	103599765	.	GGTGTGTGTGTGT	G	1887.24	PASS	AB=0.834;AC=12;AF=0.231;AN=52;BaseQRankSum=6.255;DP=575;FS=0.863;HRun=0;HaplotypeScore=179.3962;InbreedingCoeff=0.6149;MQ=58.96;MQ0=21;MQRankSum=-6.044;QD=13.98;ReadPosRankSum=1.014;VQSLOD=2.4221;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:39.13:0,39,1602	0/0:7,0:7:6.02:0,6,288	./.	./.	1/1:7,2:9:3.01:35,3,0	0/0:11,0:11:24.07:0,24,894	0/0:30,0:30:24.08:0,24,932	0/0:16,0:15:3.01:0,3,47	0/0:14,0:13:12.04:0,12,549	0/0:18,0:18:24.08:0,24,927	0/0:11,0:11:15.05:0,15,727	0/0:25,0:26:36.12:0,36,1604	0/0:13,0:13:12.51:0,13,433	0/0:16,0:16:12.01:0,12,343	0/1:22,7:28:9.44:366,0,9	1/1:19,2:23:15.05:475,15,0	0/0:23,0:26:40.38:0,40,2064	0/1:21,0:23:7.56:8,0,789	0/0:15,0:17:18.05:0,18,319	0/0:13,0:13:6.02:0,6,137	0/0:39,0:36:9.49:0,9,137	1/1:11,5:18:18.06:577,18,0	0/0:12,0:11:9.92:0,10,392	0/0:29,0:30:30.10:0,30,1166	0/0:14,0:12:6.91:0,7,213	1/1:19,4:23:15.05:380,15,0	0/0:15,0:20:21.05:0,21,297	1/1:5,2:7:6.02:205,6,0
chr10	103602408	.	G	GGA	240.97	PASS	AB=0.968;AC=26;AF=0.542;AN=48;BaseQRankSum=1.297;DP=299;FS=11.032;HRun=0;HaplotypeScore=53.2067;InbreedingCoeff=0.1136;MQ=47.73;MQ0=13;MQRankSum=-0.287;QD=1.21;ReadPosRankSum=-2.703;VQSLOD=-0.3457;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:36:79.87:80,0,164	0/0:3,0:2:3.01:0,3,32	./.	./.	./.	0/1:10,0:10:0.28:0,0,31	0/1:14,0:13:30.03:30,0,77	1/1:12,0:11:0.47:2,0,0	0/0:17,0:17:2.24:0,2,17	1/1:12,0:12:3.48:40,3,0	0/1:8,0:8:14.31:14,0,29	0/0:7,0:7:3.48:0,3,33	0/1:11,0:11:0.14:0,0,0	0/0:13,0:13:8.88:0,9,80	1/1:7,0:7:2.99:24,3,0	0/1:7,0:6:0.14:0,0,0	0/1:17,1:16:10.89:11,0,76	0/1:7,4:10:12.48:40,0,12	1/1:10,0:10:1.25:3,1,0	0/1:5,0:4:0:0,0,0	./.	1/1:7,0:7:6.01:65,6,0	0/0:7,0:7:6.44:0,6,46	0/0:15,0:15:12.03:0,12,130	1/1:15,0:15:3:26,3,0	1/1:7,0:7:0.47:1,0,0	1/1:4,0:4:3:25,3,0	0/1:4,0:3:0:0,0,0
chr10	103604910	.	G	GA	2927.34	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-9.780;DP=607;FS=5.879;HRun=9;HaplotypeScore=57.9693;InbreedingCoeff=0.8800;MQ=68.90;MQ0=12;MQRankSum=-0.949;QD=19.78;ReadPosRankSum=0.838;VQSLOD=4.1437;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:83.25:0,83,723	0/0:5,0:5:5.99:0,6,52	0/0:33,0:22:38.90:0,39,332	0/1:23,0:13:42.05:42,0,95	1/1:5,21:25:55.02:588,55,0	0/0:20,0:20:50.93:0,51,435	0/0:23,0:23:63.46:0,63,547	0/0:37,0:37:86.94:0,87,750	0/0:11,0:11:29.99:0,30,260	0/0:24,0:25:62.02:0,62,524	0/0:20,0:20:47.97:0,48,416	0/0:15,0:15:41.97:0,42,361	0/0:16,0:16:41.97:0,42,361	0/0:21,0:21:59.71:0,60,504	1/1:6,15:22:47.90:497,48,0	1/1:3,13:16:30.08:332,30,0	0/0:39,0:39:92.95:0,93,801	0/0:21,0:21:44.94:0,45,382	0/0:20,0:20:43.99:0,44,367	0/0:18,0:17:41.98:0,42,364	0/0:20,0:20:56.96:0,57,490	1/1:3,25:28:75.20:827,75,0	0/0:23,0:23:65.97:0,66,569	0/0:20,0:19:47.98:0,48,416	0/0:19,0:19:53.98:0,54,469	1/1:4,19:23:34.10:596,34,0	0/0:21,0:21:62.99:0,63,546	1/1:1,8:9:22.30:235,22,0
chr10	103605877	.	C	CA	3649.46	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-9.029;DP=554;FS=5.734;HRun=1;HaplotypeScore=66.0957;InbreedingCoeff=0.9969;MQ=97.24;MQ0=0;MQRankSum=-2.673;QD=35.43;ReadPosRankSum=1.301;VQSLOD=3.8172;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.14:0,72,845	0/0:8,0:8:21.05:0,21,258	0/0:38,0:38:99:0,108,1338	0/0:20,0:20:51.13:0,51,623	1/1:0,10:10:30.02:421,30,0	0/0:18,0:18:48.14:0,48,605	0/0:23,0:23:66.21:0,66,856	0/0:23,0:23:69.09:0,69,804	0/0:22,0:22:63.18:0,63,802	0/0:16,0:16:39.12:0,39,494	0/0:13,0:13:30.07:0,30,351	0/0:24,0:24:72.23:0,72,934	0/0:25,0:25:75.21:0,75,941	0/0:25,0:25:72.19:0,72,900	1/1:0,30:30:69.23:1034,69,0	1/1:2,26:28:36.28:1014,36,0	0/0:26,0:26:72.21:0,72,901	0/0:13,0:13:39.09:0,39,478	0/0:15,0:15:35.83:0,36,424	0/0:19,0:19:48.09:0,48,553	0/0:22,0:22:54.04:0,54,645	1/1:2,12:14:32.93:429,33,0	0/0:17,0:17:48:0,48,584	0/0:24,0:24:69.15:0,69,859	0/0:12,0:12:27.09:0,27,350	1/1:1,13:14:36.12:522,36,0	0/0:22,0:22:60.18:0,60,758	1/1:3,4:7:18.03:230,18,0
chr10	103605939	.	AAAC	A	3424.58	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.361;DP=840;FS=0.000;HRun=0;HaplotypeScore=166.0447;InbreedingCoeff=0.9604;MQ=69.28;MQ0=2;MQRankSum=3.680;QD=21.27;ReadPosRankSum=-1.185;VQSLOD=3.0483;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:75.26:0,75,1461	0/0:14,0:14:27.09:0,27,536	0/0:41,0:31:18.06:0,18,348	0/0:36,0:33:18.28:0,18,668	0/0:39,0:41:79.34:0,79,968	0/0:28,1:29:27.58:0,28,1253	0/0:22,0:22:57.17:0,57,1062	1/1:23,13:36:36.09:465,36,0	0/0:22,0:22:9.62:0,10,913	0/0:35,0:35:81.28:0,81,1612	0/0:20,0:20:48.13:0,48,882	0/0:28,0:28:57.20:0,57,1133	0/0:36,0:36:81.28:0,81,1594	0/0:31,0:31:66.23:0,66,1306	0/0:31,0:37:71.63:0,72,827	0/0:22,0:29:68.87:0,69,730	0/0:33,1:34:39.62:0,40,1489	0/0:22,0:22:42.14:0,42,830	1/1:21,10:31:30.08:398,30,0	1/1:6,18:25:48.13:646,48,0	1/1:9,25:34:66.22:916,66,0	0/0:32,0:34:86.98:0,87,1053	0/0:29,0:29:48.16:0,48,954	0/0:34,0:34:87.30:0,87,1730	0/0:22,0:22:45.15:0,45,890	0/0:35,0:35:77.37:0,77,919	1/1:10,25:35:72.24:1000,72,0	0/0:4,0:8:6.02:0,6,79
chr10	103605968	.	ATGG	A	1099.63	PASS	AB=0.809;AC=5;AF=0.089;AN=56;BaseQRankSum=9.321;DP=842;FS=26.160;HRun=0;HaplotypeScore=163.8975;InbreedingCoeff=-0.0982;MQ=64.41;MQ0=5;MQRankSum=-7.652;QD=5.85;ReadPosRankSum=-1.767;VQSLOD=0.9252;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.32:0,93,2258	0/0:12,0:12:32.78:0,33,808	0/0:47,0:29:76.73:0,77,1638	0/0:22,0:21:28.86:0,29,1216	0/1:35,6:39:70.26:70,0,1969	0/0:27,0:27:81.28:0,81,1943	0/0:25,0:25:75.24:0,75,1785	0/0:38,0:38:99:0,108,2107	0/0:22,1:23:30.31:0,30,1573	0/0:39,0:39:99:0,115,2726	0/0:18,0:18:54.16:0,54,1269	0/0:31,0:31:90.31:0,90,2185	0/0:30,0:30:90.31:0,90,2159	0/0:30,0:30:90.30:0,90,2124	0/1:28,8:36:99:171,0,1557	0/1:22,9:30:99:301,0,1047	0/0:35,0:35:99:0,102,2430	0/0:22,0:22:63.20:0,63,1449	0/0:28,0:27:77.33:0,77,1410	0/0:31,0:31:87.25:0,87,1417	0/0:39,0:39:98.94:0,99,1508	0/1:34,10:43:99:225,0,2129	0/0:23,0:23:69.22:0,69,1616	0/0:37,0:37:99:0,111,2686	0/0:22,0:22:66.22:0,66,1570	0/1:25,11:35:99:450,0,1307	0/0:35,0:35:98.43:0,98,1345	0/0:9,0:9:24.08:0,24,499
chr10	103609114	.	G	GCC	724.33	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=4.384;DP=279;FS=6.240;HRun=10;HaplotypeScore=44.1523;InbreedingCoeff=0.7767;MQ=76.13;MQ0=1;MQRankSum=-1.189;QD=9.53;ReadPosRankSum=-3.261;VQSLOD=-0.3962;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:31.85:0,32,309	0/0:1,0:1:3.01:0,3,31	0/0:11,0:11:14.99:0,15,146	0/0:15,0:16:0.76:0,1,95	1/1:6,0:6:8.94:78,9,0	0/0:2,0:3:5.75:0,6,42	0/0:11,0:11:15.47:0,15,153	1/1:9,5:14:6.94:71,7,0	0/0:14,0:14:39.06:0,39,396	0/0:12,0:12:29.79:0,30,286	0/0:8,0:8:21.01:0,21,207	0/0:10,0:10:24.03:0,24,244	0/0:7,0:7:18.03:0,18,183	0/0:10,0:11:29.81:0,30,286	1/1:7,0:7:12.01:112,12,0	1/1:6,0:6:12.02:114,12,0	0/0:32,0:32:72.07:0,72,731	0/0:18,0:18:41.99:0,42,404	1/1:3,2:5:6.02:90,6,0	1/1:0,2:2:2.79:38,3,0	1/1:10,8:18:8.87:132,9,0	1/1:4,0:4:9.01:85,9,0	0/0:3,0:4:8.75:0,9,73	0/0:17,0:17:30.51:0,31,377	0/0:9,0:9:27.06:0,27,274	1/1:5,0:5:3:26,3,0	1/1:2,1:6:13.51:116,14,0	1/1:3,0:3:6.01:57,6,0
chr10	103609124	.	C	CCCA	1424.58	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=1.517;DP=348;FS=16.856;HRun=0;HaplotypeScore=64.2698;InbreedingCoeff=0.5784;MQ=71.75;MQ0=1;MQRankSum=1.847;QD=12.39;ReadPosRankSum=-4.796;VQSLOD=0.8368;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:53.99:0,54,643	0/0:5,0:5:12:0,12,121	0/0:8,0:8:17.22:0,17,236	0/0:11,0:12:11.28:0,11,132	1/1:0,9:17:47.62:419,48,0	0/0:5,0:5:15:0,15,149	0/0:10,0:10:18.01:0,18,261	0/1:9,0:9:23.72:24,0,121	0/0:17,0:17:48.05:0,48,669	0/0:18,0:18:48.10:0,48,623	0/0:9,0:9:24.07:0,24,356	0/0:12,0:12:27.08:0,27,404	0/0:10,0:10:21.05:0,21,303	0/0:11,0:11:30.08:0,30,434	1/1:0,5:12:12.04:233,12,0	1/1:0,6:9:12.04:270,12,0	0/0:31,0:31:81.17:0,81,1213	0/0:19,0:19:51.01:0,51,659	0/0:7,0:7:3.94:0,4,95	0/1:11,0:11:7.73:8,0,57	0/1:19,0:19:30.56:31,0,120	1/1:1,9:15:26.84:324,27,0	0/0:6,0:6:4.04:0,4,157	0/0:15,0:15:30.53:0,31,583	0/0:15,0:15:33.09:0,33,478	1/1:1,0:7:17.97:154,18,0	0/1:10,0:10:11.50:11,0,14	1/1:0,5:6:6.02:136,6,0
chr10	103609336	.	TTA	T	279.62	PASS	AC=8;AF=0.235;AN=34;BaseQRankSum=4.002;DP=152;FS=10.788;HRun=0;HaplotypeScore=41.0215;InbreedingCoeff=0.4712;MQ=99.29;MQ0=7;MQRankSum=-1.933;QD=21.51;ReadPosRankSum=-0.559;VQSLOD=2.4967;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:9.03:0,9,156	0/0:2,0:2:6.02:0,6,101	0/0:19,0:8:0.83:0,1,43	0/0:64,0:21:19.07:0,19,150	1/1:0,3:3:3.01:40,3,0	0/0:2,0:2:6.02:0,6,104	./.	./.	./.	0/0:1,0:1:3.01:0,3,36	0/0:1,0:1:3.01:0,3,52	./.	./.	0/0:1,0:1:3.01:0,3,49	./.	./.	0/0:21,0:21:48.16:0,48,793	0/0:20,0:20:54.18:0,54,905	0/0:1,0:1:3:0,3,26	./.	./.	1/1:1,0:1:3.01:38,3,0	./.	0/0:1,0:1:3.01:0,3,52	0/0:2,0:2:6.02:0,6,104	1/1:0,2:2:6.02:76,6,0	./.	1/1:0,7:7:18.06:239,18,0
chr10	103609368	.	G	GAT	596.80	PASS	AB=0.806;AC=14;AF=0.333;AN=42;BaseQRankSum=2.401;DP=134;FS=12.347;HRun=0;HaplotypeScore=33.4145;InbreedingCoeff=0.2882;MQ=97.83;MQ0=0;MQRankSum=-1.624;QD=9.47;ReadPosRankSum=-1.869;VQSLOD=1.3143;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:9.03:0,9,108	0/0:2,0:2:6.02:0,6,72	1/1:7,0:6:0.47:1,0,0	0/1:27,0:15:2.47:2,0,17	0/1:2,2:5:29.94:42,0,30	0/0:4,0:4:12.04:0,12,144	./.	1/1:3,0:2:5.78:31,6,0	0/0:1,0:1:3.01:0,3,36	./.	0/0:3,0:3:9.03:0,9,108	0/0:4,0:4:6.02:0,6,72	0/0:1,0:3:8.69:0,9,64	0/0:2,0:2:6.02:0,6,72	./.	0/1:2,0:2:29.95:40,0,30	0/0:14,0:14:33.10:0,33,396	0/0:23,0:25:59.81:0,60,660	./.	./.	1/1:1,0:1:2.99:24,3,0	1/1:0,1:1:3.01:48,3,0	./.	0/0:2,0:2:6.02:0,6,72	0/0:4,0:6:12.02:0,12,131	1/1:0,4:4:12.04:189,12,0	./.	0/1:4,8:12:74.78:350,0,75
chr10	103610912	.	C	CTG	3448.29	PASS	AB=0.786;AC=21;AF=0.389;AN=54;BaseQRankSum=-3.606;DP=782;FS=8.939;HRun=0;HaplotypeScore=121.1006;InbreedingCoeff=0.0857;MQ=64.52;MQ0=7;MQRankSum=0.552;QD=7.55;ReadPosRankSum=2.251;VQSLOD=2.4724;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,3:38:61.60:62,0,172	0/0:7,0:9:14.38:0,14,105	./.	0/0:28,0:16:3.01:0,3,33	0/1:11,12:23:21.31:123,0,21	0/0:18,0:16:17.37:0,17,156	0/0:31,0:35:35.60:0,36,341	1/1:24,0:24:12.02:128,12,0	0/1:20,2:23:0.36:0,0,382	0/0:28,0:28:20.18:0,20,196	0/0:20,0:23:26.49:0,26,220	0/0:28,0:31:50.38:0,50,442	0/0:22,0:27:40.86:0,41,360	0/0:37,1:41:14.55:0,15,698	0/1:24,19:43:99:529,0,133	0/1:11,7:20:99:197,0,110	0/0:28,0:30:38.68:0,39,357	0/1:19,12:31:53.51:375,0,54	1/1:16,0:16:6:54,6,0	1/1:10,7:17:9.02:116,9,0	0/1:38,2:60:6.41:131,0,6	0/1:32,6:40:23.77:441,0,24	0/1:15,7:25:33.34:33,0,74	1/1:18,21:40:6.82:657,7,0	0/0:21,0:23:22.13:0,22,217	0/1:15,8:23:14.10:363,0,14	1/1:11,2:22:3.14:184,3,0	0/1:9,0:9:23.42:56,0,23
chr10	103612422	.	A	AAC	463.10	PASS	AB=0.896;AC=12;AF=0.250;AN=48;BaseQRankSum=-1.628;DP=488;FS=0.000;HRun=0;HaplotypeScore=83.4139;InbreedingCoeff=0.5207;MQ=64.87;MQ0=20;MQRankSum=0.886;QD=3.96;ReadPosRankSum=-0.474;VQSLOD=2.2029;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:31:18.16:0,18,274	0/0:5,0:6:5.85:0,6,46	./.	./.	1/1:11,6:18:9.03:121,9,0	0/0:15,0:15:17.22:0,17,155	0/0:11,0:10:8.66:0,9,65	0/0:20,0:20:1.81:0,2,7	0/0:15,0:16:8.85:0,9,79	0/0:15,0:21:7.11:0,7,48	0/0:10,0:19:11.32:0,11,56	0/0:10,0:9:16.57:0,17,157	0/0:5,0:6:8.85:0,9,79	0/0:10,0:10:9.01:0,9,90	1/1:13,3:18:3.01:44,3,0	0/1:14,3:19:21.84:78,0,22	0/0:31,0:31:33.25:0,33,335	0/0:31,0:31:23.53:0,24,227	0/0:14,0:11:3.48:0,3,33	0/0:9,0:15:15.76:0,16,69	./.	1/1:6,6:14:9.01:103,9,0	0/1:18,0:18:16.95:17,0,207	0/0:17,0:14:15.51:0,16,162	0/0:16,0:16:8.75:0,9,73	1/1:13,4:17:12.04:160,12,0	./.	1/1:4,6:13:6.02:89,6,0
chr10	103613366	.	A	ATGTGTG	6822.99	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-5.139;DP=730;FS=2.602;HRun=0;HaplotypeScore=184.2330;InbreedingCoeff=0.9047;MQ=59.58;MQ0=2;MQRankSum=-7.776;QD=26.34;ReadPosRankSum=-1.490;VQSLOD=4.5983;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:49:99:0,126,2628	0/0:3,0:3:9.03:0,9,194	0/0:40,0:21:12.19:0,12,327	0/0:38,0:29:9.84:0,10,494	1/1:4,6:12:9.03:187,9,0	0/0:22,0:22:54.19:0,54,1163	0/0:46,0:47:61.42:0,61,2215	1/1:27,0:27:46.68:1018,47,0	0/0:29,0:30:72.25:0,72,1489	0/0:24,0:25:49.46:0,49,978	0/0:15,0:15:39.13:0,39,839	0/0:29,0:30:84.29:0,84,1769	0/0:31,0:31:60.21:0,60,1291	0/0:27,0:27:69.24:0,69,1466	1/1:8,22:33:24.08:802,24,0	1/1:4,11:17:23.95:690,24,0	0/0:30,0:30:75.21:0,75,1516	0/0:22,0:24:57.16:0,57,1109	1/1:25,0:25:48.10:996,48,0	1/1:16,0:16:6.02:186,6,0	1/1:48,0:48:5.02:50,5,0	1/1:11,9:24:12.04:278,12,0	0/0:11,0:11:27.08:0,27,541	0/0:34,0:34:93.32:0,93,1933	0/0:14,0:14:36.12:0,36,774	1/1:7,19:31:7.62:1801,8,0	1/1:20,0:20:24.08:679,24,0	1/1:3,1:6:5.40:136,5,0
chr10	103613381	.	T	TGTGTGC	6905.42	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=-0.977;DP=717;FS=1.798;HRun=0;HaplotypeScore=178.5308;InbreedingCoeff=0.4623;MQ=62.68;MQ0=4;MQRankSum=-5.329;QD=26.77;ReadPosRankSum=-2.285;VQSLOD=4.4639;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,153,3206	0/0:4,0:4:12.02:0,12,245	0/0:30,0:20:19.56:0,20,541	0/0:40,0:31:39.15:0,39,727	0/1:14,0:14:31.84:126,0,32	0/0:24,0:24:69.16:0,69,1431	0/0:43,0:43:99:0,104,2688	1/1:3,17:27:74.98:1513,75,0	0/0:30,0:30:87.22:0,87,1796	0/0:22,0:22:60.18:0,60,1192	0/0:14,0:14:42.13:0,42,947	0/0:29,0:29:87.28:0,87,2035	0/0:24,0:24:69.19:0,69,1526	0/0:27,0:27:75.23:0,75,1704	0/1:35,0:35:99:617,0,103	0/1:17,0:17:24.92:567,0,25	0/0:30,0:30:87.13:0,87,1855	0/0:25,0:25:72.10:0,72,1380	1/1:4,18:24:65.96:1353,66,0	1/1:1,16:17:6.02:217,6,0	1/1:5,30:46:4.86:94,5,0	0/1:20,0:20:36.83:211,0,37	0/0:9,0:9:27.09:0,27,625	0/0:38,0:38:99:0,108,2349	0/0:18,0:18:51.11:0,51,1000	0/1:29,0:29:61.22:1312,0,61	1/1:1,18:22:23.95:804,24,0	0/1:5,0:5:2.25:91,0,2
chr10	103613639	.	AT	A	1770.62	PASS	AC=42;AF=0.913;AN=46;BaseQRankSum=1.486;DP=77;FS=9.603;HRun=1;HaplotypeScore=55.3441;InbreedingCoeff=0.2825;MQ=115.96;MQ0=1;MQRankSum=-4.733;QD=32.19;ReadPosRankSum=2.772;VQSLOD=2.3668;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,5:7:18.05:230,18,0	./.	0/0:9,0:7:0.93:0,1,47	0/0:12,0:11:14.10:0,14,118	./.	1/1:0,2:2:6.02:83,6,0	1/1:0,4:4:12.04:166,12,0	1/1:0,2:2:6.02:83,6,0	1/1:0,2:5:12.03:144,12,0	1/1:0,1:1:3.01:40,3,0	1/1:0,3:3:8.85:75,9,0	1/1:0,1:1:3.01:42,3,0	1/1:0,1:2:6.02:78,6,0	1/1:0,3:3:9.03:125,9,0	1/1:0,3:3:9.03:125,9,0	1/1:0,2:2:6.02:83,6,0	1/1:0,4:4:9.03:125,9,0	1/1:1,1:2:6.01:64,6,0	1/1:0,1:1:3.01:42,3,0	1/1:0,1:1:3.01:42,3,0	1/1:1,4:5:5.91:58,6,0	./.	1/1:1,1:2:6.01:66,6,0	1/1:0,2:2:6.02:83,6,0	1/1:0,2:2:6.02:83,6,0	./.	1/1:0,1:1:3.01:42,3,0	./.
chr10	103613657	.	TTC	T	1717.01	PASS	AB=0.800;AC=42;AF=0.913;AN=46;BaseQRankSum=4.377;DP=94;FS=21.992;HRun=0;HaplotypeScore=60.7142;InbreedingCoeff=0.0788;MQ=127.88;MQ0=2;MQRankSum=-4.377;QD=24.18;ReadPosRankSum=3.555;VQSLOD=2.1772;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:14.98:198,15,0	./.	0/0:23,0:15:27.68:0,28,376	0/1:20,0:15:13.67:14,0,228	./.	1/1:1,2:3:6.02:82,6,0	1/1:1,4:5:12.03:188,12,0	1/1:0,2:2:6.02:96,6,0	1/1:1,2:3:8.96:114,9,0	1/1:1,1:2:3.01:42,3,0	1/1:0,3:3:3.01:46,3,0	1/1:0,1:1:3.01:47,3,0	1/1:1,1:2:6.02:86,6,0	1/1:0,3:3:9.03:137,9,0	0/1:1,2:3:9.46:86,0,9	1/1:1,2:3:6.02:95,6,0	1/1:1,2:3:9.01:118,9,0	1/1:1,0:1:3.01:42,3,0	1/1:0,1:1:3.01:48,3,0	1/1:0,1:1:3.01:47,3,0	1/1:0,4:4:6.02:94,6,0	./.	1/1:1,0:1:2.97:20,3,0	1/1:0,2:2:6.02:94,6,0	1/1:0,2:2:6.02:91,6,0	./.	1/1:0,1:1:3.01:47,3,0	./.
chr10	103613667	.	TC	T	158.98	PASS	AC=12;AF=0.286;AN=42;BaseQRankSum=1.105;DP=121;FS=1.256;HRun=9;HaplotypeScore=65.9973;InbreedingCoeff=0.4648;MQ=109.77;MQ0=2;MQRankSum=-1.849;QD=6.91;ReadPosRankSum=0.803;VQSLOD=1.0684;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:11.98:0,12,108	./.	0/0:24,0:15:0.19:0,0,31	0/0:17,0:13:12.49:0,12,102	./.	./.	0/0:9,0:9:9:0,9,85	1/1:2,1:3:3:27,3,0	0/0:4,0:4:8.38:0,8,47	0/0:2,0:2:1.25:0,1,3	./.	0/0:2,0:2:5.50:0,6,44	0/0:4,0:4:8.98:0,9,79	0/0:3,0:3:3.38:0,3,11	0/0:3,0:3:2.97:0,3,20	0/0:3,0:3:5.38:0,5,41	0/0:3,0:3:2.74:0,3,12	0/0:1,0:1:2.68:0,3,11	1/1:1,2:3:5.97:47,6,0	1/1:1,3:4:3:27,3,0	1/1:1,7:8:8.75:80,9,0	./.	0/0:2,0:2:2.30:0,2,33	./.	1/1:1,1:2:3:26,3,0	0/0:2,0:1:3.01:0,3,35	1/1:0,3:3:9:80,9,0	./.
chr10	103613683	.	GC	G	1039.84	PASS	AB=0.821;AC=18;AF=0.360;AN=50;BaseQRankSum=3.407;DP=138;FS=0.000;HRun=5;HaplotypeScore=35.1644;InbreedingCoeff=0.5239;MQ=84.00;MQ0=1;MQRankSum=-0.806;QD=14.85;ReadPosRankSum=0.577;VQSLOD=1.7907;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:21.03:0,21,266	0/0:1,0:1:3:0,3,25	0/1:10,0:6:2.40:2,0,62	0/1:10,0:7:11.01:11,0,62	./.	0/0:4,0:4:12.03:0,12,147	0/0:12,0:12:33.07:0,33,429	1/1:0,5:5:15.04:170,15,0	0/0:3,0:3:3.01:0,3,40	./.	0/0:2,0:2:6.02:0,6,82	0/0:4,0:4:11.98:0,12,126	0/0:4,0:4:12.04:0,12,159	0/0:4,0:4:9.03:0,9,123	1/1:0,4:4:12.03:136,12,0	0/1:1,1:2:28.02:28,0,35	0/0:6,0:6:18.06:0,18,245	0/0:5,0:5:15.05:0,15,205	1/1:0,4:4:12.02:126,12,0	1/1:0,8:8:18.05:204,18,0	1/1:4,7:11:14.57:167,15,0	1/1:0,1:1:3.01:34,3,0	0/0:5,0:5:12.04:0,12,163	0/0:3,0:3:9.03:0,9,123	0/0:5,0:5:12.04:0,12,164	0/1:3,5:7:61.06:139,0,61	1/1:1,6:7:18.05:198,18,0	./.
chr10	103616647	.	GCA	G	3042.18	PASS	AB=0.786;AC=45;AF=0.833;AN=54;BaseQRankSum=3.251;DP=589;FS=9.463;HRun=0;HaplotypeScore=81.2111;InbreedingCoeff=0.0704;MQ=74.55;MQ0=8;MQRankSum=2.020;QD=6.01;ReadPosRankSum=0.506;VQSLOD=2.2419;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:24,14:38:18.05:195,18,0	1/1:3,1:5:11.86:111,12,0	./.	0/0:32,0:27:0:0,0,0	1/1:10,0:16:14.20:70,14,0	1/1:15,10:26:14.87:144,15,0	1/1:22,6:29:8.86:79,9,0	0/0:29,0:29:4.92:0,5,27	1/1:8,5:13:12.03:130,12,0	0/1:18,0:19:3.44:75,0,3	1/1:7,3:10:3.01:33,3,0	1/1:6,6:13:17.88:176,18,0	1/1:8,8:15:15.04:163,15,0	1/1:5,9:16:14.71:125,15,0	0/1:18,4:23:26.82:108,0,27	1/1:12,1:22:28.57:158,29,0	1/1:29,14:45:14.89:508,15,0	1/1:23,5:29:6.02:219,6,0	1/1:14,0:20:19.72:95,20,0	1/1:17,0:21:2.84:14,3,0	0/1:20,0:28:16.30:16,0,32	1/1:4,0:9:2.84:14,3,0	1/1:13,2:15:9.02:96,9,0	1/1:26,18:45:41.73:417,42,0	1/1:6,3:9:9.02:98,9,0	0/1:13,0:18:11.56:40,0,12	1/1:4,0:10:0.21:64,0,0	0/1:3,0:7:14.21:19,0,14
chr10	103618641	.	G	GTACATACATACA	14330.48	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=0.230;DP=700;FS=0.841;HRun=0;HaplotypeScore=223.9282;InbreedingCoeff=0.9654;MQ=68.71;MQ0=2;MQRankSum=-12.303;QD=47.30;ReadPosRankSum=-4.209;VQSLOD=3.4511;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:73.92:0,74,2564	0/0:10,0:10:12.04:0,12,341	0/0:37,0:30:10.83:0,11,197	0/0:19,0:18:9.03:0,9,153	1/1:9,7:17:11.66:658,12,0	0/0:14,0:14:27.06:0,27,775	0/0:15,0:15:24.08:0,24,693	1/1:53,0:52:60.15:1395,60,0	0/0:16,0:16:33.11:0,33,1127	0/0:46,0:46:90.23:0,90,2736	0/0:22,0:22:42.14:0,42,1393	0/0:19,0:19:39.11:0,39,1175	0/0:24,0:25:51.17:0,51,1628	0/0:18,0:18:33.10:0,33,1055	1/1:10,16:27:48.16:2799,48,0	1/1:9,15:24:33.11:1921,33,0	0/0:14,0:14:30.05:0,30,811	0/0:19,0:19:39.13:0,39,1244	1/1:14,0:20:27.96:630,28,0	1/1:15,0:33:42.14:1023,42,0	1/1:17,0:18:9.03:163,9,0	1/1:11,17:29:33.11:1772,33,0	0/0:29,0:30:69.12:0,69,1936	0/0:25,0:25:48.12:0,48,1567	0/0:20,0:21:54.13:0,54,1664	1/1:10,15:29:53.84:2015,54,0	1/1:16,0:37:48.76:1297,49,0	1/1:7,8:15:15.05:658,15,0
chr10	103618892	.	ATT	A	4104.79	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=7.429;DP=500;FS=4.880;HRun=5;HaplotypeScore=85.9998;InbreedingCoeff=0.9234;MQ=72.10;MQ0=12;MQRankSum=2.078;QD=23.59;ReadPosRankSum=-0.468;VQSLOD=1.7664;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:59.90:0,60,945	0/0:6,0:6:12.04:0,12,196	0/0:35,0:25:49.72:0,50,896	0/0:25,0:18:53.95:0,54,813	1/1:14,1:15:32.60:366,33,0	0/0:12,0:12:27.09:0,27,449	0/0:22,0:22:66.21:0,66,1087	1/1:2,8:9:24.06:299,24,0	0/0:19,0:18:6.82:0,7,663	0/0:22,0:22:60.20:0,60,1031	0/0:11,0:10:27.09:0,27,457	0/0:17,0:17:48.16:0,48,789	0/0:19,0:18:54.15:0,54,825	0/0:21,0:21:59.69:0,60,955	1/1:18,0:18:44.58:509,45,0	1/1:28,1:28:59.13:646,59,0	0/0:22,0:22:59.94:0,60,978	0/0:15,0:15:35.42:0,35,550	1/1:14,1:14:36.01:438,36,0	1/1:5,2:7:6.01:83,6,0	1/1:16,0:15:6.22:114,6,0	1/1:19,1:20:45.50:547,45,0	0/0:15,0:15:45.14:0,45,692	0/0:33,0:33:76.01:0,76,1140	0/0:9,0:9:27.04:0,27,413	1/1:4,17:21:4.43:633,4,0	1/1:15,0:14:32.86:375,33,0	1/1:7,1:8:8.94:95,9,0
chr10	103618897	.	TCACA	T	841.03	PASS	AC=26;AF=0.542;AN=48;BaseQRankSum=-5.416;DP=558;FS=0.000;HRun=0;HaplotypeScore=122.2888;InbreedingCoeff=0.5960;MQ=64.24;MQ0=15;MQRankSum=0.169;QD=3.32;ReadPosRankSum=-1.143;VQSLOD=1.8121;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/0:16,0:16:17.27:0,17,258	1/1:11,3:14:3.01:46,3,0	1/1:24,0:25:6.01:74,6,0	0/0:12,0:11:0:0,0,0	1/1:18,4:21:6.02:92,6,0	1/1:22,0:21:6.01:81,6,0	1/1:10,0:9:3:27,3,0	1/1:14,3:17:6.49:92,6,0	1/1:17,2:19:9.02:120,9,0	1/1:19,1:21:0.82:127,1,0	0/0:19,0:19:20.56:0,21,314	0/0:30,0:29:24.08:0,24,410	1/1:19,4:23:3.01:46,3,0	1/1:16,2:18:6.02:92,6,0	0/0:20,0:19:15.05:0,15,284	0/0:20,0:19:1.72:0,2,8	0/0:22,0:21:2.03:0,2,46	0/0:25,0:24:25.64:0,26,374	1/1:15,0:14:3.01:46,3,0	1/1:28,7:35:6.02:92,6,0	1/1:10,0:10:5.99:68,6,0	0/0:27,0:27:39.70:0,40,618	0/0:19,0:18:11.22:0,11,171	0/0:9,0:9:3.01:0,3,48
chr10	103618930	.	C	CAT	2034.66	PASS	AB=0.926;AC=15;AF=0.268;AN=56;BaseQRankSum=1.948;DP=565;FS=2.266;HRun=0;HaplotypeScore=100.4352;InbreedingCoeff=0.3036;MQ=52.09;MQ0=18;MQRankSum=0.308;QD=8.20;ReadPosRankSum=4.031;VQSLOD=3.4975;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:50.55:0,51,397	0/0:4,0:4:8.98:0,9,72	0/0:19,0:14:16.82:0,17,178	0/0:25,0:17:38.89:0,39,371	1/1:6,10:16:2.78:180,3,0	0/0:14,0:13:14.95:0,15,119	0/0:23,0:22:38.25:0,38,307	0/1:30,0:30:85.23:339,0,85	0/0:18,0:17:26.90:0,27,207	0/0:19,0:19:54.72:0,55,460	0/0:8,0:7:17.96:0,18,145	0/0:13,0:13:35.91:0,36,286	0/0:11,0:11:25.95:0,26,191	0/0:29,0:28:65.68:0,66,519	0/1:4,21:24:14.20:263,0,14	1/1:5,20:24:14.35:365,14,0	0/0:21,0:20:41.21:0,41,296	0/0:23,0:23:46.10:0,46,351	0/1:17,0:16:73.19:94,0,73	0/1:22,0:21:18.28:18,0,19	0/1:31,0:29:4.40:121,0,4	1/1:19,3:21:33.01:320,33,0	0/0:11,0:10:20.91:0,21,159	0/0:38,0:38:56.54:0,57,449	0/0:14,0:14:32.51:0,33,263	0/1:30,1:32:49.45:372,0,49	0/1:18,0:18:74.13:74,0,81	1/1:1,9:10:3.01:57,3,0
chr10	103619517	.	TC	T	4550.62	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.851;DP=728;FS=10.435;HRun=3;HaplotypeScore=72.6486;InbreedingCoeff=0.9988;MQ=90.44;MQ0=0;MQRankSum=-1.720;QD=34.22;ReadPosRankSum=-3.576;VQSLOD=3.1616;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:64:99:0,190,2721	0/0:7,0:7:21.07:0,21,301	0/0:28,0:28:84.26:0,84,1174	0/0:29,0:29:78.17:0,78,1067	0/0:19,0:19:57.19:0,57,819	0/0:16,0:16:45.15:0,45,648	0/0:33,0:33:96.32:0,96,1382	1/1:1,32:33:94.15:1130,94,0	0/0:21,0:21:63.21:0,63,907	0/0:28,0:28:84.28:0,84,1202	0/0:17,0:17:45.15:0,45,647	0/0:32,0:32:96.31:0,96,1362	0/0:29,0:29:87.29:0,87,1252	0/0:32,0:32:96.31:0,96,1364	0/0:22,0:22:66.22:0,66,950	0/0:23,0:23:69.22:0,69,977	0/0:41,0:41:99:0,123,1771	0/0:24,0:24:72.21:0,72,999	1/1:1,18:19:54.17:669,54,0	1/1:1,15:16:45.14:558,45,0	1/1:1,42:43:99:1451,117,0	0/0:24,0:24:72.24:0,72,1036	0/0:17,0:17:42.14:0,42,588	0/0:35,0:35:99:0,102,1464	0/0:17,0:17:51.17:0,51,734	0/0:28,0:28:81.27:0,81,1166	1/1:1,21:22:60.19:744,60,0	0/0:9,0:9:27.09:0,27,388
chr10	103620804	.	G	GC	549.83	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=8.543;DP=652;FS=26.243;HRun=1;HaplotypeScore=100.4901;InbreedingCoeff=0.8672;MQ=94.23;MQ0=0;MQRankSum=-8.653;QD=11.22;ReadPosRankSum=-2.964;VQSLOD=-0.0187;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,169,2180	0/0:17,0:17:48.16:0,48,623	0/0:38,0:38:99:0,111,1355	0/0:22,0:22:63.18:0,63,774	0/0:20,0:20:57.17:0,57,725	0/0:22,0:22:66.21:0,66,852	0/0:27,0:27:78.25:0,78,1012	1/1:8,1:9:24.79:240,25,0	0/0:36,0:36:99:0,105,1358	0/0:18,0:18:54.18:0,54,701	0/0:11,0:11:33.11:0,33,428	0/0:27,0:27:81.26:0,81,1052	0/0:22,0:22:66.20:0,66,842	0/0:19,0:19:57.17:0,57,726	0/0:20,0:20:60.20:0,60,779	0/0:30,0:30:90.28:0,90,1154	0/0:32,0:32:90.29:0,90,1168	0/0:28,0:28:84.27:0,84,1090	0/1:4,0:4:0.21:55,0,0	1/1:3,3:6:9.03:118,9,0	1/1:10,5:15:2.23:63,2,0	0/0:33,0:33:93.30:0,93,1202	0/0:16,0:16:48.16:0,48,623	0/0:32,0:32:93.28:0,93,1188	0/0:27,0:27:78.25:0,78,1012	0/0:32,0:32:93.30:0,93,1207	1/1:15,0:15:28.28:225,28,0	0/0:16,0:16:48.16:0,48,623
chr10	103621223	.	A	AAAAC	5919.91	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.279;DP=618;FS=2.598;HRun=0;HaplotypeScore=95.9452;InbreedingCoeff=0.9784;MQ=65.63;MQ0=0;MQRankSum=-3.816;QD=43.53;ReadPosRankSum=-2.947;VQSLOD=4.2251;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,112,1879	0/0:5,0:5:12.03:0,12,177	0/0:14,0:13:12.04:0,12,187	0/0:18,0:17:27.09:0,27,427	0/0:23,0:23:54.17:0,54,867	0/0:18,0:18:39.12:0,39,621	0/0:27,0:27:60.20:0,60,986	1/1:10,16:26:54.17:1127,54,0	0/0:17,0:17:36.12:0,36,596	0/0:18,0:18:42.14:0,42,666	0/0:12,0:12:33.06:0,33,483	0/0:26,0:26:60.19:0,60,971	0/0:24,0:24:63.22:0,63,1045	0/0:19,0:19:39.13:0,39,646	0/0:24,0:24:48.16:0,48,800	0/0:23,0:23:48.16:0,48,796	0/0:22,0:22:57.18:0,57,911	0/0:19,0:19:45.15:0,45,736	1/1:11,13:24:42.06:921,42,0	1/1:11,18:29:63.17:1456,63,0	1/1:9,16:25:42.14:1027,42,0	0/0:20,0:20:48.15:0,48,727	0/0:21,0:21:54.18:0,54,876	0/0:26,0:26:66.21:0,66,1062	0/0:28,0:28:69.24:0,69,1150	0/0:23,0:23:51.17:0,51,849	1/1:8,23:31:57.20:1389,57,0	0/0:4,0:4:12.04:0,12,200
chr10	103623967	.	GA	G	598.29	PASS	AB=0.776;AC=15;AF=0.278;AN=54;BaseQRankSum=3.809;DP=243;FS=6.805;HRun=1;HaplotypeScore=43.7739;InbreedingCoeff=0.4965;MQ=89.07;MQ0=1;MQRankSum=-1.636;QD=6.88;ReadPosRankSum=-1.333;VQSLOD=-0.0583;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:39.12:0,39,566	0/0:1,0:1:3.01:0,3,46	0/0:21,0:18:44.60:0,45,522	0/1:14,2:15:6.05:6,0,340	0/1:3,0:3:1.25:21,0,1	0/0:5,0:5:15.03:0,15,194	0/0:15,0:15:26.58:0,27,410	0/1:5,3:8:5.76:142,0,6	0/0:12,0:12:26.97:0,27,363	0/0:9,0:9:27:0,27,312	0/0:5,0:5:15.02:0,15,188	0/0:9,0:9:17.99:0,18,218	0/0:14,0:14:27.05:0,27,390	0/0:6,0:6:12.03:0,12,164	1/1:5,0:5:9:77,9,0	1/1:9,1:10:5.99:49,6,0	0/0:14,0:14:31.74:0,32,482	0/0:3,0:3:3:0,3,46	0/0:3,1:4:5.19:0,5,27	1/1:5,1:6:8.98:73,9,0	0/1:12,11:23:3.80:210,0,4	1/1:2,1:3:2.67:23,3,0	0/0:6,0:6:15.05:0,15,215	0/0:9,0:9:21.05:0,21,271	0/0:7,0:7:13.73:0,14,269	1/1:3,0:3:5.96:45,6,0	0/1:3,7:10:4.33:111,0,4	./.
chr10	103623972	.	GGT	G	1164.51	PASS	AB=1.000;AC=20;AF=0.370;AN=54;BaseQRankSum=5.837;DP=257;FS=1.962;HRun=0;HaplotypeScore=44.2658;InbreedingCoeff=0.7132;MQ=79.09;MQ0=1;MQRankSum=-2.472;QD=11.65;ReadPosRankSum=-3.525;VQSLOD=2.6167;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.10:0,54,733	0/0:1,0:1:3.01:0,3,51	0/0:21,0:18:32.66:0,33,453	0/1:13,0:12:3.35:3,0,191	0/1:5,0:5:3.43:41,0,3	0/0:9,0:9:27.04:0,27,355	0/0:16,0:16:32.47:0,32,475	1/1:11,0:11:16.41:197,16,0	0/0:13,0:13:21.82:0,22,408	0/0:7,0:7:15.02:0,15,204	0/0:3,0:3:9.02:0,9,127	0/0:8,0:8:3.14:0,3,180	0/0:14,0:14:35.09:0,35,460	0/0:6,0:6:18.03:0,18,255	1/1:10,0:10:22.33:200,22,0	1/1:1,10:11:5.98:54,6,0	0/0:14,0:14:41.47:0,41,570	0/0:3,0:3:8.80:0,9,70	1/1:3,0:3:1.77:3,2,0	1/1:5,0:5:6.89:65,7,0	1/1:23,0:23:41.14:421,41,0	1/1:6,0:6:12.47:111,12,0	0/0:7,0:7:18.05:0,18,266	0/0:8,0:8:21.03:0,21,281	0/0:8,0:8:19.17:0,19,248	1/1:2,0:2:2.96:19,3,0	1/1:11,0:11:9.12:233,9,0	./.
chr10	103623973	.	GT	G	988.80	PASS	AB=0.962;AC=22;AF=0.407;AN=54;BaseQRankSum=5.886;DP=258;FS=0.555;HRun=1;HaplotypeScore=41.1140;InbreedingCoeff=0.6818;MQ=78.03;MQ0=1;MQRankSum=-0.908;QD=9.24;ReadPosRankSum=-3.904;VQSLOD=-0.4010;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.01:0,57,619	0/0:2,0:2:2.99:0,3,39	0/0:22,0:19:28.96:0,29,368	0/1:11,1:11:4.72:5,0,168	1/1:5,0:5:1.55:44,2,0	0/0:9,0:9:27:0,27,287	0/0:17,0:17:14.68:0,15,394	1/1:8,3:11:16.64:177,17,0	0/0:13,0:13:21.89:0,22,332	0/0:6,0:6:15.02:0,15,174	0/0:3,0:3:9.02:0,9,104	0/1:9,0:9:14.38:14,0,146	0/0:14,0:14:34.49:0,34,368	0/0:6,0:6:18.02:0,18,208	1/1:8,1:9:22.47:200,22,0	1/1:10,1:11:5.96:44,6,0	0/0:14,0:14:41.42:0,41,453	0/0:3,0:3:8.80:0,9,69	1/1:2,1:3:0.11:1,0,0	1/1:2,1:3:8.48:58,8,0	1/1:13,11:24:46.01:344,46,0	1/1:7,0:7:14.65:122,15,0	0/0:7,0:7:18.04:0,18,211	0/0:8,0:8:21.02:0,21,237	0/0:8,0:8:20.06:0,20,195	1/1:2,0:2:2.96:19,3,0	1/1:4,7:11:8:146,8,0	./.
chr10	103626553	.	C	CAG	2122.85	PASS	AB=0.667;AC=11;AF=0.196;AN=56;BaseQRankSum=7.796;DP=702;FS=5.192;HRun=0;HaplotypeScore=101.8362;InbreedingCoeff=0.8166;MQ=49.69;MQ0=14;MQRankSum=1.555;QD=16.72;ReadPosRankSum=1.075;VQSLOD=3.4397;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:45:99:0,108,1420	0/0:10,0:10:27.09:0,27,359	0/0:11,0:2:6.02:0,6,80	0/0:12,0:2:6.02:0,6,80	1/1:7,14:18:21.07:363,21,0	0/0:24,0:24:63.21:0,63,837	0/0:28,0:28:75.22:0,75,981	0/0:71,0:69:99:0,117,1674	0/0:29,0:29:69.21:0,69,900	0/0:27,0:27:66.20:0,66,847	0/0:16,0:16:36.10:0,36,464	0/0:23,0:23:59.92:0,60,798	0/0:22,0:22:62.41:0,62,796	0/0:23,0:23:57.16:0,57,725	1/1:10,26:34:32.68:567,33,0	1/1:6,11:16:29.97:472,30,0	0/0:22,0:22:60.16:0,60,777	0/0:34,0:33:84.27:0,84,1112	0/0:23,0:18:33.02:0,33,387	0/0:19,2:21:33.11:0,33,434	0/0:30,0:30:30.05:0,30,339	1/1:15,18:31:24.07:388,24,0	0/0:21,0:19:42.06:0,42,522	0/0:47,0:45:90.07:0,90,1179	0/0:11,0:12:24.08:0,24,319	0/1:9,9:16:54.01:424,0,54	0/0:17,7:24:16.11:0,16,526	1/1:0,2:2:6.01:80,6,0
chr10	103626587	.	CAG	C	449.46	PASS	AB=0.974;AC=12;AF=0.214;AN=56;BaseQRankSum=9.655;DP=782;FS=0.000;HRun=0;HaplotypeScore=121.6144;InbreedingCoeff=0.3221;MQ=56.62;MQ0=16;MQRankSum=-3.918;QD=1.72;ReadPosRankSum=-4.606;VQSLOD=0.2968;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,117,2008	0/0:10,0:10:27.09:0,27,463	0/0:22,0:9:20.95:0,21,283	0/0:38,0:15:8.48:0,8,110	0/1:21,1:18:0.11:0,0,0	0/0:29,0:29:69.20:0,69,1132	0/0:22,0:22:63.13:0,63,997	0/1:56,0:54:99:116,0,1008	0/0:22,0:22:54.17:0,54,893	0/0:28,0:28:69.24:0,69,1189	0/0:15,0:14:33.11:0,33,562	0/0:22,0:22:57.01:0,57,948	0/0:26,0:26:75.21:0,75,1211	0/0:26,0:26:72.21:0,72,1160	1/1:27,4:29:2.94:18,3,0	0/1:20,3:22:8.35:42,0,8	0/0:30,0:30:84.24:0,84,1375	0/0:37,1:37:99:0,99,1606	0/1:19,0:13:45.55:46,0,179	0/0:27,0:27:13.26:0,13,181	0/0:37,0:35:6.02:0,6,91	1/1:33,4:35:2.87:26,3,0	0/0:19,0:17:42.11:0,42,651	0/0:47,0:46:99:0,108,1786	0/0:13,0:13:24.05:0,24,385	0/1:30,0:29:99:190,0,158	0/1:31,0:31:35.27:35,0,411	1/1:13,0:13:15.38:124,15,0
chr10	103626593	.	GAGACAGAGAC	G	4282.79	PASS	AB=0.770;AC=13;AF=0.232;AN=56;BaseQRankSum=11.618;DP=796;FS=2.133;HRun=0;HaplotypeScore=197.0495;InbreedingCoeff=0.3926;MQ=61.23;MQ0=17;MQRankSum=-5.486;QD=15.08;ReadPosRankSum=-3.278;VQSLOD=3.2694;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,132,5383	0/0:10,0:10:30.10:0,30,1098	0/0:28,0:11:5.92:0,6,465	0/1:48,0:22:0.56:1,0,269	0/0:8,14:18:0.47:0,0,1	0/0:26,0:26:72.21:0,72,2823	0/0:26,0:26:78.25:0,78,2714	0/1:29,24:51:99:929,0,644	0/0:20,1:21:60.19:0,60,2089	0/0:28,0:28:81.28:0,81,3053	0/0:16,0:15:39.13:0,39,1332	0/0:20,0:20:60.21:0,60,2275	0/0:25,0:25:75.24:0,75,3257	0/0:31,0:31:87.30:0,87,3283	1/1:7,24:29:3.38:53,3,0	1/1:5,15:19:7.97:261,8,0	0/0:31,0:31:90.16:0,90,3612	0/0:37,0:36:99:0,105,3780	0/1:8,9:13:99:329,0,139	0/0:9,17:26:13.26:0,13,237	0/0:35,0:33:6.02:0,6,117	1/1:10,25:33:2.76:26,3,0	0/0:20,0:18:51.17:0,51,1798	0/0:46,0:45:99:0,115,4974	0/0:14,0:14:30.10:0,30,1216	0/1:27,3:29:15.09:1604,0,15	0/1:10,20:30:99:502,0,342	1/1:1,17:18:21.04:578,21,0
chr10	103626603	.	C	CACAGAGAG	6634.18	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=7.614;DP=834;FS=0.838;HRun=0;HaplotypeScore=184.0152;InbreedingCoeff=0.8032;MQ=65.33;MQ0=17;MQRankSum=-7.506;QD=17.93;ReadPosRankSum=-6.270;VQSLOD=2.2703;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,135,2810	0/0:9,0:9:24.08:0,24,605	0/0:43,0:23:29.57:0,30,511	0/1:70,0:32:2.77:3,0,247	1/1:19,0:16:0.09:0,0,0	0/0:24,0:24:63.14:0,63,1405	0/0:28,0:28:81.15:0,81,1522	1/1:40,0:39:99:1388,102,0	0/0:25,0:25:63.12:0,63,1330	0/0:28,0:28:72.23:0,72,1727	0/0:20,0:19:41.87:0,42,813	0/0:21,0:21:51.15:0,51,1232	0/0:25,0:25:72.18:0,72,1729	0/0:33,0:33:81.23:0,81,1897	1/1:27,0:25:2.39:52,2,0	1/1:17,0:16:9.03:315,9,0	0/0:32,0:32:41.40:0,41,1972	0/0:38,0:37:67.04:0,67,1763	1/1:13,0:11:30.01:466,30,0	1/1:23,0:23:2.99:25,3,0	1/1:8,33:43:2.37:8,2,0	0/1:31,0:29:0.04:0,0,0	0/0:23,0:21:48.13:0,48,1063	0/0:44,0:43:89.47:0,89,2543	0/0:16,0:16:36.09:0,36,730	1/1:4,31:39:96.20:2838,96,0	1/1:29,0:29:35.42:932,35,0	1/1:17,0:17:18.06:608,18,0
chr10	103627258	.	TTTTCTTTCTTTCTTTC	T	479.68	PASS	AB=0.962;AC=9;AF=0.196;AN=46;BaseQRankSum=0.358;DP=627;FS=0.000;HRun=0;HaplotypeScore=242.5744;InbreedingCoeff=0.3567;MQ=55.20;MQ0=20;MQRankSum=1.186;QD=2.98;ReadPosRankSum=0.743;VQSLOD=2.3916;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:30:17.98:0,18,473	0/0:15,0:15:15.05:0,15,908	./.	./.	0/1:29,9:37:10.07:138,0,10	0/0:12,0:12:9.01:0,9,265	0/0:24,0:24:0:0,0,0	./.	0/0:19,0:18:9.03:0,9,199	0/0:30,0:28:36.11:0,36,1400	0/0:15,0:15:3.01:0,3,192	0/0:26,0:25:24.07:0,24,671	0/0:20,0:20:24.07:0,24,724	0/0:14,0:14:15.05:0,15,697	1/1:20,0:19:12.03:190,12,0	0/1:18,0:17:29.23:105,0,29	0/0:31,0:27:24.08:0,24,760	0/0:31,0:28:39.11:0,39,1332	0/1:25,0:20:0:0,0,0	./.	0/1:6,0:5:0:0,0,0	1/1:19,4:23:5.93:40,6,0	./.	0/0:30,0:26:27.08:0,27,808	0/0:31,0:33:48.14:0,48,1446	0/1:31,0:30:99:127,0,166	0/0:23,0:23:3.72:0,4,12	0/0:9,0:9:3.01:0,3,171
chr10	103631430	.	CCT	C	6238.52	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.213;DP=716;FS=12.649;HRun=0;HaplotypeScore=86.5170;InbreedingCoeff=0.9990;MQ=82.20;MQ0=0;MQRankSum=-2.437;QD=42.73;ReadPosRankSum=-0.435;VQSLOD=5.2870;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,162,3091	0/0:11,0:11:33.02:0,33,545	0/0:15,0:15:45.14:0,45,796	0/0:23,0:23:65.83:0,66,1066	0/0:25,0:25:75.18:0,75,1436	0/0:17,0:17:48.15:0,48,938	0/0:21,0:21:63.19:0,63,1193	1/1:0,33:33:95.94:1432,96,0	0/0:21,0:21:63.22:0,63,1263	0/0:24,0:24:72.25:0,72,1456	0/0:16,0:16:48.16:0,48,974	0/0:29,0:29:87.30:0,87,1765	0/0:24,0:24:72.23:0,72,1426	0/0:34,0:34:99:0,102,1964	0/0:32,0:32:96.33:0,96,1949	0/0:25,0:25:75.22:0,75,1402	0/0:34,0:34:99:0,102,1995	0/0:37,0:37:99:0,111,2235	1/1:0,32:32:89.95:1299,90,0	1/1:0,18:18:51.17:829,51,0	1/1:0,40:40:99:1706,105,0	0/0:27,0:27:81.28:0,81,1607	0/0:17,0:17:48.15:0,48,937	0/0:31,0:31:93.32:0,93,1835	0/0:16,0:16:45.13:0,45,844	0/0:29,0:29:87.29:0,87,1727	1/1:0,23:23:60.07:972,60,0	0/0:7,0:7:21.01:0,21,347
chr10	103632128	.	GGTGTGTGTGTGTGTGTGTGT	G	2587.69	PASS	AB=1.000;AC=11;AF=0.229;AN=48;BaseQRankSum=7.140;DP=320;FS=22.444;HRun=0;HaplotypeScore=141.3324;InbreedingCoeff=0.6479;MQ=67.45;MQ0=14;MQRankSum=-4.615;QD=36.97;ReadPosRankSum=0.800;VQSLOD=1.2491;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:11:6.02:0,6,392	0/0:5,0:5:6.02:0,6,349	./.	0/1:24,0:14:0:0,0,0	1/1:2,5:6:5.98:179,6,0	0/0:10,0:7:9.03:0,9,471	0/0:12,0:12:6.02:0,6,352	./.	0/0:5,0:5:6.02:0,6,471	0/0:13,0:13:18.06:0,18,988	0/0:5,0:5:3.01:0,3,251	0/0:8,0:8:10.60:0,11,625	0/0:5,0:5:12.04:0,12,859	0/0:4,0:3:6.02:0,6,558	1/1:4,7:12:18.06:936,18,0	1/1:2,6:8:15.05:777,15,0	0/0:24,0:23:36.12:0,36,2844	0/0:20,0:20:30.10:0,30,2425	0/0:10,0:9:6.91:0,7,177	0/0:5,0:5:3.01:0,3,93	0/0:37,0:38:31.82:0,32,1405	./.	./.	0/0:25,0:24:36.12:0,36,2691	0/0:4,0:4:6.02:0,6,268	1/1:6,8:13:17.11:682,17,0	0/0:6,0:9:12.04:0,12,585	1/1:2,2:3:3.01:159,3,0
chr10	103632211	.	C	CAT	34.51	PASS	AB=1.000;AC=5;AF=0.50;AN=10;BaseQRankSum=-1.231;DP=109;FS=3.979;HRun=0;HaplotypeScore=32.7476;MQ=78.61;MQ0=1;MQRankSum=1.231;QD=0.68;ReadPosRankSum=-0.358;VQSLOD=1.0844;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/1:11,0:7:0:0,0,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/1:8,0:8:0:0,0,0	./.	1/1:6,10:16:6.49:89,6,0	0/1:12,0:16:11.25:11,0,19	./.	./.	./.	./.	./.	0/0:7,0:7:0:0,0,0	./.	./.	./.	./.
chr10	103632640	.	G	GT	2485.07	PASS	AB=0.924;AC=14;AF=0.250;AN=56;BaseQRankSum=-5.735;DP=546;FS=0.427;HRun=10;HaplotypeScore=75.9857;InbreedingCoeff=0.7671;MQ=74.47;MQ0=6;MQRankSum=-0.547;QD=16.68;ReadPosRankSum=-1.044;VQSLOD=3.7098;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:55.01:0,55,654	0/0:3,0:3:5.99:0,6,49	0/0:38,0:20:19:0,19,159	0/0:35,1:20:10.34:0,10,127	1/1:8,18:26:53.76:523,54,0	0/0:12,0:12:35.96:0,36,295	0/0:18,0:19:49.97:0,50,400	0/1:17,1:18:1.88:2,0,192	0/0:18,0:17:41.30:0,41,337	0/0:14,0:14:29.96:0,30,246	0/0:15,0:15:35.95:0,36,295	0/0:15,0:15:20.87:0,21,169	0/0:20,0:21:52.70:0,53,412	0/0:21,3:24:3.89:0,4,316	1/1:5,11:16:24.95:257,25,0	1/1:2,19:22:44.53:507,45,0	0/0:32,0:33:85.39:0,85,676	0/0:12,0:12:32.79:0,33,255	0/0:25,0:25:10.87:0,11,282	0/0:13,0:13:15.98:0,16,175	0/1:8,1:9:27.69:28,0,95	1/1:2,13:15:8.44:295,8,0	0/0:15,0:15:16.94:0,17,202	0/0:13,0:13:29.95:0,30,246	0/0:15,0:15:35.92:0,36,291	1/1:3,26:29:75.34:731,75,0	0/0:18,0:18:17.84:0,18,134	1/1:0,13:14:32.91:327,33,0
chr10	103632654	.	G	GTTT	1454.80	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=2.586;DP=571;FS=0.000;HRun=13;HaplotypeScore=100.0995;InbreedingCoeff=0.8155;MQ=67.35;MQ0=7;MQRankSum=-0.586;QD=11.73;ReadPosRankSum=-2.477;VQSLOD=0.8248;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:39:84.34:0,84,824	0/0:3,0:3:9.01:0,9,87	0/0:39,0:16:14.21:0,14,121	0/1:37,0:17:23.47:23,0,79	0/0:22,0:23:33.16:0,33,328	0/0:13,0:14:39.01:0,39,395	0/0:21,0:21:44.70:0,45,460	1/1:6,13:20:38.54:498,39,0	0/0:19,0:18:54.11:0,54,564	0/0:13,0:13:26.89:0,27,272	0/0:15,0:15:29.82:0,30,305	0/0:12,0:13:29.77:0,30,265	0/0:22,0:23:28.53:0,29,286	0/0:20,0:21:31.64:0,32,354	0/0:15,0:15:29.84:0,30,281	0/0:25,0:26:59.12:0,59,539	0/0:35,0:35:89.74:0,90,911	0/0:12,0:13:15.61:0,16,143	1/1:18,3:22:32.53:346,33,0	1/1:5,10:17:29.99:408,30,0	1/1:7,0:12:12.01:150,12,0	0/0:19,0:19:28:0,28,248	0/0:14,0:14:1.57:0,2,130	0/0:11,0:14:36:0,36,362	0/0:16,0:17:38.77:0,39,366	0/0:33,0:33:41.73:0,42,383	1/1:5,10:16:15:204,15,0	0/0:18,0:18:23.49:0,23,219
chr10	103633169	.	T	TG	2861.45	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-8.038;DP=623;FS=6.378;HRun=8;HaplotypeScore=63.6427;InbreedingCoeff=0.9828;MQ=78.71;MQ0=0;MQRankSum=-0.673;QD=21.84;ReadPosRankSum=-1.458;VQSLOD=3.4372;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:84.03:0,84,768	0/0:12,0:12:36.02:0,36,329	0/0:15,0:15:29.98:0,30,266	0/0:16,0:16:21:0,21,192	0/0:14,0:14:36.02:0,36,328	0/0:15,0:15:42:0,42,378	0/0:25,0:25:54.02:0,54,494	1/1:9,17:26:8.61:334,9,0	0/0:25,0:25:72.03:0,72,659	0/0:17,0:17:48.02:0,48,438	0/0:8,0:8:24:0,24,214	0/0:27,0:27:63:0,63,568	0/0:31,0:31:84.02:0,84,763	0/0:24,0:24:57.01:0,57,521	0/0:31,0:31:84.04:0,84,769	0/0:19,0:19:51.03:0,51,466	0/0:40,0:40:99:0,99,906	0/0:29,0:29:66.02:0,66,604	1/1:3,9:12:27.04:288,27,0	1/1:3,11:14:27.08:311,27,0	1/1:17,47:64:99:1650,144,0	0/0:13,0:13:36.01:0,36,328	0/0:13,0:13:36.02:0,36,329	0/0:25,0:26:56.05:0,56,500	0/0:20,0:20:45.01:0,45,411	0/0:20,0:20:33.47:0,33,303	1/1:2,13:15:39.12:450,39,0	0/0:14,0:14:36.01:0,36,329
chr10	103633462	.	AGTGTGT	A	812.14	PASS	AB=0.909;AC=17;AF=0.315;AN=54;BaseQRankSum=6.307;DP=565;FS=8.709;HRun=0;HaplotypeScore=114.0863;InbreedingCoeff=0.4942;MQ=67.02;MQ0=9;MQRankSum=-1.766;QD=3.96;ReadPosRankSum=0.863;VQSLOD=1.7144;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:28:15.43:15,0,758	0/0:4,0:4:6.02:0,6,133	./.	0/0:32,0:22:3.01:0,3,45	1/1:12,4:16:3.01:42,3,0	0/0:13,0:14:12.04:0,12,289	0/0:30,0:29:27.09:0,27,696	0/1:36,0:35:42.84:43,0,55	0/0:17,0:17:17.81:0,18,498	0/0:21,0:21:24.08:0,24,569	0/0:9,0:9:12.01:0,12,271	0/0:18,0:21:15.05:0,15,348	0/0:20,0:20:27.09:0,27,668	0/0:15,0:15:27.09:0,27,728	1/1:9,6:15:11.53:224,12,0	1/1:11,7:19:15.05:285,15,0	0/0:27,0:32:38.23:0,38,818	0/0:20,0:22:29.29:0,29,735	0/0:17,0:16:3.01:0,3,45	0/0:13,0:18:0.39:0,0,19	1/1:32,0:36:6.14:67,6,0	1/1:13,2:15:2.97:20,3,0	0/0:13,0:15:12.04:0,12,271	0/0:37,0:37:48.16:0,48,1311	0/0:13,0:15:17.15:0,17,412	1/1:13,4:17:5.89:108,6,0	0/1:11,1:14:31.75:56,0,32	1/1:3,3:6:6.02:122,6,0
chr10	103634814	.	G	GCAGCAGCAA	2171.97	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=0.896;DP=576;FS=9.752;HRun=0;HaplotypeScore=144.2672;InbreedingCoeff=0.6066;MQ=54.77;MQ0=19;MQRankSum=-1.936;QD=9.78;ReadPosRankSum=-4.934;VQSLOD=-0.6031;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:70.50:0,71,685	0/0:6,0:6:14.80:0,15,135	0/0:19,0:6:9:0,9,100	0/0:11,0:2:2.96:0,3,19	1/1:10,0:9:14.89:117,15,0	0/0:16,0:16:34.62:0,35,285	0/0:42,0:42:99:0,110,1444	1/1:17,0:15:26.55:192,27,0	0/0:19,0:19:45.10:0,45,686	0/0:21,0:20:24.97:0,25,347	0/0:6,0:5:11.45:0,11,96	0/0:21,0:21:56.91:0,57,988	0/0:21,0:21:60.10:0,60,1078	0/0:35,0:35:99:0,99,1437	1/1:1,37:45:9.03:436,9,0	1/1:2,26:32:9.38:343,9,0	0/0:29,0:29:87.03:0,87,1499	0/0:20,0:20:60.09:0,60,1026	0/1:16,0:14:3.96:128,0,4	0/1:11,0:11:30.91:113,0,31	0/1:35,0:34:99:400,0,234	1/1:7,0:7:17.85:141,18,0	0/0:4,0:4:9.26:0,9,63	0/0:35,0:35:93.08:0,93,1461	0/0:13,0:11:22.73:0,23,175	1/1:18,0:16:5.97:214,6,0	0/1:24,0:24:99:146,0,530	1/1:6,0:6:14.99:134,15,0
chr10	103635719	.	T	TGGA	1651.34	PASS	AB=0.945;AC=13;AF=0.232;AN=56;BaseQRankSum=12.750;DP=1055;FS=5.090;HRun=0;HaplotypeScore=268.5482;InbreedingCoeff=-0.2998;MQ=56.23;MQ0=4;MQRankSum=-11.596;QD=3.48;ReadPosRankSum=-8.098;VQSLOD=-0.4231;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:52,3:55:30.30:30,0,1987	0/1:12,0:12:18.19:18,0,474	0/0:40,0:36:96.26:0,96,1524	0/0:43,0:40:99:0,115,1791	0/0:27,0:27:48.10:0,48,815	0/1:27,2:29:38.69:39,0,1146	0/1:33,5:38:99:158,0,1193	0/1:34,16:50:99:897,0,1370	0/0:52,0:52:11.26:0,11,1892	0/0:48,0:47:86.53:0,87,2100	0/1:28,2:29:46.60:47,0,945	0/1:45,0:45:99:104,0,1862	0/0:61,0:61:56.80:0,57,2491	0/1:42,0:42:99:101,0,1540	0/0:51,0:51:99:0,148,2463	0/1:41,0:41:9.38:9,0,1772	0/0:34,1:35:45.38:0,45,1526	0/1:20,1:21:79.20:79,0,704	0/1:28,4:30:99:251,0,881	0/0:40,0:37:99:0,102,1719	0/0:60,1:61:79.46:0,79,1947	0/0:34,0:34:87.27:0,87,1417	0/0:23,0:22:51.17:0,51,867	0/1:45,1:46:14.45:14,0,1605	0/0:32,0:32:78.27:0,78,1319	0/1:34,0:34:57.31:57,0,1319	0/0:21,0:21:60.16:0,60,966	0/0:12,0:12:36.12:0,36,598
chr10	103635727	.	ATAT	A	835.19	PASS	AB=0.876;AC=6;AF=0.107;AN=56;BaseQRankSum=9.356;DP=1026;FS=10.040;HRun=0;HaplotypeScore=207.8971;InbreedingCoeff=-0.1065;MQ=52.46;MQ0=6;MQRankSum=-8.034;QD=4.31;ReadPosRankSum=0.421;VQSLOD=1.6031;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,3:57:21.45:0,21,2902	0/0:11,0:11:33.11:0,33,780	0/0:33,0:28:76.65:0,77,1585	0/0:34,0:32:91.85:0,92,1879	0/0:27,0:27:63.15:0,63,1384	0/1:29,2:31:1.25:1,0,1646	0/1:31,5:36:79.46:79,0,1783	0/1:32,15:47:99:619,0,1850	0/0:49,0:49:99:0,144,3209	0/0:50,0:49:99:0,141,3124	0/1:27,2:28:6.26:6,0,1333	0/0:42,0:42:99:0,126,2960	0/0:62,0:62:99:0,171,3551	0/0:44,0:44:99:0,126,2760	0/0:52,0:52:99:0,153,3465	0/0:45,0:45:99:0,123,2768	0/0:29,1:30:34.95:0,35,1727	0/1:16,2:18:35.37:35,0,971	0/1:27,6:30:99:208,0,1275	0/0:39,0:36:99:0,99,2214	0/0:54,1:55:99:0,116,3061	0/0:33,0:33:93.28:0,93,2135	0/0:25,0:24:63.17:0,63,1405	0/0:44,1:45:99:0,107,2443	0/0:32,0:32:90.18:0,90,1943	0/0:34,0:34:99:0,99,2260	0/0:17,0:17:48.16:0,48,1132	0/0:13,0:13:29.17:0,29,812
chr10	103635822	.	C	CGTTGTGATGATTTTGGTGGTGATCC	114341.87	PASS	AB=0.710;AC=54;AF=0.964;AN=56;BaseQRankSum=-0.021;DP=726;FS=10.541;HRun=0;HaplotypeScore=754.9460;InbreedingCoeff=-0.0361;MQ=64.16;MQ0=0;MQRankSum=-4.724;QD=157.50;ReadPosRankSum=4.344;VQSLOD=2.0364;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:28:65.67:3948,66,0	1/1:15,0:15:39.09:1967,39,0	0/1:10,0:10:9.17:1534,0,9	0/1:10,1:12:79.16:1985,0,79	1/1:26,0:25:57.20:3656,57,0	1/1:18,0:17:51.06:2991,51,0	1/1:15,0:15:39.13:2156,39,0	1/1:20,0:20:54.18:3130,54,0	1/1:38,0:38:75.26:5252,75,0	1/1:47,0:47:99:7204,114,0	1/1:22,0:21:51.18:3666,51,0	1/1:41,0:41:93.30:6245,93,0	1/1:49,0:49:99:9350,138,0	1/1:27,0:27:81.21:5401,81,0	1/1:42,0:42:93.32:7348,93,0	1/1:43,0:43:99:7471,129,0	1/1:16,0:16:36.12:2116,36,0	1/1:11,0:11:30.07:1518,30,0	1/1:15,0:15:36.10:1210,36,0	1/1:23,0:23:48.16:3509,48,0	1/1:16,0:16:42.13:3079,42,0	1/1:39,0:39:99:7889,99,0	1/1:22,0:22:51.13:3594,51,0	1/1:22,0:22:42.14:1909,42,0	1/1:30,0:29:51.13:3825,51,0	1/1:35,0:34:96.59:6354,97,0	1/1:27,0:27:78.27:5000,78,0	1/1:4,0:4:12.04:1036,12,0
chr10	103637090	.	ATGTGTGTG	A	1376.74	PASS	AB=0.743;AC=17;AF=0.340;AN=50;BaseQRankSum=8.000;DP=789;FS=7.467;HRun=0;HaplotypeScore=207.4092;InbreedingCoeff=0.6910;MQ=63.57;MQ0=15;MQRankSum=-4.307;QD=5.21;ReadPosRankSum=2.459;VQSLOD=1.6080;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:57.20:0,57,1819	0/0:11,0:11:3.01:0,3,113	./.	./.	1/1:17,8:26:3.15:56,3,0	0/0:30,0:29:40:0,40,1196	0/0:20,0:25:30.54:0,31,767	0/1:17,0:33:0:0,0,0	0/0:37,0:37:60.46:0,60,1906	0/0:31,0:33:42.60:0,43,1026	0/0:25,0:25:30.51:0,31,946	0/0:35,0:35:48.16:0,48,1443	0/0:17,0:16:24.52:0,25,758	0/0:19,0:19:22.49:0,22,603	1/1:18,10:28:7.16:218,7,0	0/1:16,8:23:0.30:81,0,0	0/0:37,0:35:45.63:0,46,1455	0/0:29,0:29:25.60:0,26,648	1/1:12,0:18:9.03:168,9,0	1/1:12,0:16:5.23:107,5,0	./.	0/1:25,8:33:9.53:96,0,10	0/0:19,0:19:18.04:0,18,488	0/0:31,0:32:45.14:0,45,1436	0/0:26,0:28:33.05:0,33,791	1/1:31,9:39:29.17:409,29,0	1/1:8,0:21:12.04:223,12,0	1/1:16,4:20:1.54:183,2,0
chr10	103637372	.	CTG	C	5566.63	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.030;DP=787;FS=3.105;HRun=0;HaplotypeScore=148.4910;InbreedingCoeff=0.9999;MQ=57.70;MQ0=2;MQRankSum=-3.021;QD=36.87;ReadPosRankSum=-1.537;VQSLOD=6.0558;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:83.96:0,84,1527	0/0:12,0:12:36.11:0,36,643	0/0:28,0:24:57.44:0,57,886	0/0:28,0:22:63.46:0,63,1076	0/0:33,0:33:49.83:0,50,1033	0/0:30,0:28:78.27:0,78,1487	0/0:25,0:25:63.20:0,63,1132	1/1:2,38:35:99:1458,99,0	0/0:20,0:20:54.18:0,54,1025	0/0:45,0:44:99:0,129,2403	0/0:23,0:23:66.23:0,66,1273	0/0:22,0:21:57.18:0,57,1050	0/0:27,0:27:81.26:0,81,1517	0/0:34,0:34:96.33:0,96,1836	0/0:36,0:36:77.46:0,77,1439	0/0:26,0:26:66.20:0,66,1183	0/0:25,0:25:63.19:0,63,1163	0/0:23,0:23:54.33:0,54,1077	1/1:0,14:14:39.09:540,39,0	1/1:0,32:32:81.28:1239,81,0	1/1:1,36:37:87.29:1322,87,0	0/0:33,0:33:84.16:0,84,1620	0/0:28,0:28:72.21:0,72,1308	0/0:25,0:24:54.10:0,54,1003	0/0:34,0:34:96.31:0,96,1808	0/0:29,0:28:84.23:0,84,1510	1/1:0,28:27:66.22:1009,66,0	0/0:15,0:15:45.13:0,45,832
chr10	103637393	.	TTCC	T	651.01	PASS	AB=0.893;AC=7;AF=0.125;AN=56;BaseQRankSum=7.228;DP=740;FS=0.672;HRun=0;HaplotypeScore=182.1835;InbreedingCoeff=-0.1442;MQ=53.22;MQ0=8;MQRankSum=-4.561;QD=3.34;ReadPosRankSum=-4.603;VQSLOD=1.3526;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,2:35:66.80:0,67,1571	0/0:10,0:10:30.10:0,30,687	0/0:14,0:11:32.89:0,33,595	0/0:17,0:9:8.17:0,8,346	0/1:24,6:30:99:105,0,660	0/0:25,0:23:69.23:0,69,1553	0/1:19,1:20:99:104,0,633	0/0:41,0:29:54.43:0,54,1565	0/0:20,0:20:54.04:0,54,1097	0/0:45,0:44:99:0,132,2992	0/0:27,0:27:81.27:0,81,1842	0/0:25,0:23:69.18:0,69,1454	0/0:28,0:28:81.24:0,81,1855	0/0:36,0:36:99:0,102,2262	0/1:24,11:35:99:242,0,1090	0/1:18,4:22:50.68:51,0,965	0/0:21,3:24:8.31:0,8,1288	0/1:23,0:23:5.86:6,0,1272	0/0:13,0:11:30.10:0,30,679	0/0:34,0:34:99:0,102,1932	0/0:31,0:31:82.93:0,83,1657	0/1:33,1:34:52.31:52,0,1571	0/0:24,0:24:64.48:0,64,776	0/0:23,1:23:47.93:0,48,690	0/0:28,0:28:84.29:0,84,1911	0/1:24,4:28:99:219,0,1266	0/0:30,0:30:84.19:0,84,1681	0/0:12,0:11:33.11:0,33,720
chr10	103637396	.	CATCT	C	781.94	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=1.420;DP=738;FS=2.528;HRun=0;HaplotypeScore=198.9508;InbreedingCoeff=0.7777;MQ=53.26;MQ0=8;MQRankSum=3.614;QD=17.38;ReadPosRankSum=3.544;VQSLOD=3.2600;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:59.78:0,60,1029	0/0:10,0:10:12.04:0,12,242	./.	./.	0/0:29,0:29:9.71:0,10,91	0/0:25,0:23:42.14:0,42,952	0/0:22,0:21:13.99:0,14,104	0/0:39,0:27:2.16:0,2,17	0/0:21,0:21:33.10:0,33,649	0/0:44,0:43:81.27:0,81,1778	0/0:27,0:27:66.20:0,66,1355	0/0:25,0:23:39.13:0,39,810	0/0:28,0:28:48.13:0,48,1024	0/0:36,0:36:59.83:0,60,1189	0/0:35,0:35:18.40:0,18,91	0/0:22,0:22:16.77:0,17,162	0/0:24,0:24:24.06:0,24,477	0/0:23,0:23:42.57:0,43,841	0/0:16,0:14:19.18:0,19,250	0/0:33,0:33:20.59:0,21,559	0/0:32,0:32:29.63:0,30,461	0/0:34,0:34:13.55:0,14,114	1/1:15,6:21:39.11:552,39,0	1/1:19,5:23:24.05:349,24,0	0/0:28,0:28:33.10:0,33,633	0/0:32,0:30:55.18:0,55,538	0/0:32,0:32:43.05:0,43,699	0/0:12,0:11:3.01:0,3,44
chr10	103637436	.	C	CATCT	3966.05	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=6.490;DP=686;FS=0.000;HRun=0;HaplotypeScore=217.6315;InbreedingCoeff=0.8911;MQ=51.04;MQ0=5;MQRankSum=-3.853;QD=20.76;ReadPosRankSum=-3.716;VQSLOD=2.6408;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:50.08:0,50,813	0/0:5,0:5:3.01:0,3,51	0/0:15,0:12:27.34:0,27,299	0/0:7,0:3:8.95:0,9,91	1/1:32,0:32:39.10:585,39,0	0/0:34,0:33:75.17:0,75,1165	0/0:23,0:22:3.08:0,3,324	1/1:24,0:20:12.45:91,12,0	0/0:22,0:22:42.06:0,42,574	0/0:42,0:43:99:0,114,1876	0/0:29,0:29:57.06:0,57,915	0/0:24,0:22:38.95:0,39,531	0/0:22,0:22:54.13:0,54,817	0/0:30,0:30:54.18:0,54,896	1/1:35,1:36:52.98:751,53,0	1/1:23,0:23:45.15:700,45,0	0/0:14,0:14:30.52:0,31,450	0/0:21,0:21:31.77:0,32,556	0/0:16,0:14:8.49:0,8,112	0/0:37,0:37:30.50:0,31,333	0/0:17,0:17:25.21:0,25,223	1/1:22,2:24:27.09:409,27,0	0/0:24,0:24:42.11:0,42,609	0/0:17,0:17:17.98:0,18,297	0/0:26,0:26:42.03:0,42,628	1/1:41,1:40:81.20:1352,81,0	0/0:30,0:30:40.02:0,40,353	1/1:10,0:10:6.02:79,6,0
chr10	103637472	.	GTCTA	G	2753.81	PASS	AB=0.750;AC=33;AF=0.660;AN=50;BaseQRankSum=4.096;DP=629;FS=0.738;HRun=0;HaplotypeScore=191.3737;InbreedingCoeff=0.6658;MQ=51.93;MQ0=13;MQRankSum=4.022;QD=7.03;ReadPosRankSum=1.987;VQSLOD=2.6889;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,15:34:6.33:263,6,0	1/1:3,4:7:12.03:185,12,0	./.	./.	1/1:22,0:29:14.27:111,14,0	1/1:17,0:33:0.94:1,1,0	1/1:16,0:16:5.84:41,6,0	0/0:31,0:36:17.65:0,18,110	1/1:9,14:23:24.08:370,24,0	0/0:37,1:38:7.96:0,8,955	1/1:14,8:22:14.69:231,15,0	1/1:10,0:24:1.41:2,1,0	1/1:10,14:24:27.09:415,27,0	1/1:17,14:31:21.07:324,21,0	./.	1/1:16,0:18:3:28,3,0	0/0:14,0:14:15.02:0,15,258	0/0:18,0:18:27.41:0,27,423	0/0:11,0:10:2.98:0,3,21	0/0:25,0:25:2.70:0,3,26	0/0:12,0:12:0.47:0,0,1	0/1:12,0:18:0:0,0,0	1/1:9,16:25:24.08:370,24,0	1/1:10,4:14:8.93:118,9,0	1/1:12,3:29:17.34:184,17,0	1/1:26,0:33:26.99:243,27,0	0/0:21,0:21:2.94:0,3,18	1/1:1,0:7:3:28,3,0
chr10	103637502	.	CT	C	94.61	PASS	AB=0.815;AC=2;AF=0.036;AN=56;BaseQRankSum=6.467;DP=584;FS=5.428;HRun=1;HaplotypeScore=173.6209;InbreedingCoeff=0.0643;MQ=50.27;MQ0=17;MQRankSum=-5.801;QD=3.38;ReadPosRankSum=2.476;VQSLOD=0.3693;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:30.47:0,30,328	0/0:8,0:8:12.24:0,12,103	0/0:9,0:3:0.47:0,0,1	0/0:5,0:2:3.01:0,3,42	0/0:30,0:30:45.04:0,45,543	0/0:28,0:28:57.05:0,57,822	0/0:10,0:10:27.06:0,27,365	0/0:36,0:24:48.59:0,49,688	0/0:31,0:31:48.55:0,49,547	0/0:39,0:39:99:0,116,1759	0/0:14,0:14:23.02:0,23,245	0/0:19,0:18:24.08:0,24,330	0/0:23,0:23:38.02:0,38,373	0/0:23,0:23:37.96:0,38,407	0/0:28,0:28:63.20:0,63,930	0/0:13,0:13:27.99:0,28,452	0/0:11,0:11:33.11:0,33,502	0/0:13,1:14:0.19:0,0,441	0/1:9,1:6:46.36:46,0,155	0/0:17,9:24:4.47:0,4,53	0/0:11,4:13:3.06:0,3,24	0/0:24,0:24:48.16:0,48,716	0/0:26,0:26:42.54:0,43,476	0/0:14,0:14:12:0,12,122	0/0:31,0:31:70.85:0,71,913	0/0:27,0:26:43.52:0,44,706	0/1:11,7:17:99:136,0,184	0/0:18,0:16:20.03:0,20,301
chr10	103637535	.	G	GTCTA	779.74	PASS	AB=0.955;AC=10;AF=0.179;AN=56;BaseQRankSum=3.264;DP=619;FS=8.792;HRun=0;HaplotypeScore=212.4292;InbreedingCoeff=0.5512;MQ=48.58;MQ0=15;MQRankSum=-5.311;QD=6.29;ReadPosRankSum=-3.980;VQSLOD=0.7437;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:34:48.11:0,48,826	0/0:8,0:8:21.07:0,21,348	0/0:14,0:3:6.02:0,6,109	0/0:7,0:3:3.01:0,3,42	0/0:34,0:34:42.10:0,42,592	0/0:25,0:24:30.06:0,30,502	0/0:8,0:8:18.03:0,18,233	1/1:29,0:19:0.44:1,0,0	0/0:35,0:35:49.44:0,49,555	0/0:41,0:40:99:0,120,2081	0/0:13,0:13:33.10:0,33,543	0/1:23,0:21:9.46:9,0,47	0/0:22,0:22:51.12:0,51,836	0/0:31,0:31:72.21:0,72,1224	0/0:23,0:23:38.86:0,39,525	0/0:14,0:14:33.04:0,33,400	0/0:19,0:19:51.04:0,51,810	0/0:13,0:12:7.86:0,8,134	1/1:8,2:6:6.02:140,6,0	1/1:17,8:20:24.20:528,24,0	1/1:17,0:12:3.89:34,4,0	0/0:29,0:29:60.66:0,61,820	0/0:32,0:32:69.22:0,69,1182	0/0:14,0:13:15.05:0,15,266	0/0:32,0:32:51.16:0,51,880	0/0:30,0:29:77.21:0,77,1055	0/1:18,2:19:25.62:203,0,26	0/0:14,0:14:39.08:0,39,505
chr10	103637539	.	GTCTA	G	385.65	PASS	AB=1.000;AC=10;AF=0.192;AN=52;BaseQRankSum=4.324;DP=619;FS=5.563;HRun=0;HaplotypeScore=202.8437;InbreedingCoeff=0.4269;MQ=48.77;MQ0=18;MQRankSum=-2.877;QD=2.23;ReadPosRankSum=-1.923;VQSLOD=1.9974;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,6:37:36.38:462,36,0	0/0:8,0:8:6.02:0,6,142	./.	./.	0/0:31,0:31:6:0,6,56	0/0:24,0:23:35.81:0,36,754	0/0:8,0:8:0:0,0,0	0/0:28,0:18:5.93:0,6,40	0/1:37,0:37:3.32:3,0,83	0/0:42,0:41:78.25:0,78,1777	0/0:14,0:14:15.02:0,15,306	0/1:22,0:20:0.40:0,0,1	0/0:21,0:20:24.08:0,24,566	0/0:34,0:34:51.16:0,51,1128	1/1:23,0:23:1.36:3,1,0	0/0:14,0:14:6:0,6,56	0/1:19,0:19:10.85:11,0,653	1/1:14,0:13:2.96:20,3,0	0/0:8,0:5:5.60:0,6,43	0/0:29,0:23:10.94:0,11,30	0/1:18,0:12:0.22:0,0,0	0/0:29,0:29:4.82:0,5,37	0/0:32,0:32:42.11:0,42,875	0/0:11,0:10:9.03:0,9,213	0/0:31,0:31:42.10:0,42,835	0/0:29,0:28:10.67:0,11,154	0/0:22,0:21:16.16:0,16,138	0/0:14,0:14:1.29:0,1,3
chr10	103637581	.	CTGTT	C	4927.10	PASS	AB=0.948;AC=23;AF=0.411;AN=56;BaseQRankSum=9.802;DP=640;FS=5.625;HRun=0;HaplotypeScore=183.5280;InbreedingCoeff=0.2320;MQ=47.84;MQ0=21;MQRankSum=-1.867;QD=12.86;ReadPosRankSum=-0.712;VQSLOD=4.0977;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:26:0,26,615	0/0:9,0:9:27.09:0,27,465	0/0:12,0:1:3.01:0,3,31	0/0:10,0:1:3:0,3,28	0/1:24,0:24:25.55:70,0,26	0/0:21,0:20:59.90:0,60,1112	0/0:6,0:6:8.51:0,9,110	0/0:26,0:18:50.11:0,50,646	0/1:40,0:40:99:485,0,804	0/0:43,0:42:79.07:0,79,1465	0/0:18,0:18:51.17:0,51,965	1/1:21,3:22:51.11:654,51,0	0/1:15,2:16:99:105,0,361	0/0:23,11:34:19.31:0,19,861	1/1:23,0:23:8.20:151,8,0	0/1:19,1:20:51.22:241,0,51	0/0:21,0:21:53.82:0,54,812	1/1:6,14:19:0.73:142,1,0	0/1:9,2:8:24.01:137,0,24	1/1:33,9:39:46.80:755,47,0	1/1:15,4:14:23.30:196,23,0	1/1:26,1:27:16.38:412,16,0	0/1:29,0:29:33.05:33,0,500	0/1:13,3:15:99:104,0,156	0/0:21,0:21:60.21:0,60,1246	0/1:23,0:23:21.47:699,0,21	0/1:33,0:32:64.66:280,0,65	1/1:15,0:14:16.02:462,16,0
chr10	103637585	.	TTATCTATC	T	1589.17	PASS	AB=0.853;AC=13;AF=0.250;AN=52;BaseQRankSum=2.294;DP=659;FS=0.605;HRun=0;HaplotypeScore=232.4818;InbreedingCoeff=0.6579;MQ=47.97;MQ0=20;MQRankSum=-4.997;QD=7.75;ReadPosRankSum=-6.042;VQSLOD=0.8636;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:59.48:0,59,1605	0/0:9,0:9:21.07:0,21,728	./.	./.	1/1:15,9:24:20.43:345,20,0	0/0:22,0:21:47.90:0,48,1403	0/0:7,0:7:8.48:0,8,255	0/0:30,0:22:21.06:0,21,296	0/0:40,0:40:54.11:0,54,1719	0/1:26,0:40:21.10:21,0,418	0/0:21,0:21:51.18:0,51,1649	0/0:25,0:23:23.97:0,24,229	0/0:17,0:16:16.61:0,17,202	0/0:32,0:32:18.04:0,18,315	1/1:9,16:25:11.74:74,12,0	0/1:15,4:19:95.34:174,0,95	0/0:23,0:23:36.12:0,36,987	0/0:18,0:19:14.43:0,14,99	0/0:11,0:9:10.12:0,10,68	0/0:42,0:39:54.30:0,54,490	0/0:22,0:17:22.60:0,23,231	1/1:22,8:30:41.04:488,41,0	0/1:14,0:29:0.31:0,0,94	0/0:15,0:14:24.05:0,24,306	0/0:24,0:24:48.16:0,48,1609	1/1:20,3:23:25.54:578,26,0	0/0:34,0:34:43.70:0,44,523	1/1:14,0:13:2.98:75,3,0
chr10	103637663	.	C	CTGTA	4961.31	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=5.445;DP=813;FS=0.347;HRun=0;HaplotypeScore=213.8834;InbreedingCoeff=0.3913;MQ=57.16;MQ0=3;MQRankSum=-0.535;QD=13.34;ReadPosRankSum=0.564;VQSLOD=4.1856;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:75.08:0,75,1090	0/0:13,0:13:30.05:0,30,420	0/0:32,0:29:48:0,48,629	0/0:26,0:20:38.45:0,38,570	1/1:35,1:36:47.80:727,48,0	0/0:25,0:25:57.18:0,57,912	0/0:12,0:12:30.09:0,30,439	0/0:39,0:38:84.07:0,84,1056	0/0:37,0:37:84.26:0,84,1312	0/0:44,0:44:99:0,111,1732	0/0:36,0:36:81.04:0,81,1127	0/1:31,0:31:99:157,0,545	0/1:25,0:24:6.45:6,0,582	0/1:24,0:24:85.90:86,0,368	1/1:33,2:36:32.82:581,33,0	1/1:24,1:25:48.15:821,48,0	0/0:36,0:36:52.60:0,53,1160	0/0:24,0:24:42.09:0,42,598	0/0:8,0:7:5.46:0,5,185	0/1:46,0:46:83.43:83,0,570	0/1:22,0:21:3.04:3,0,324	1/1:31,0:31:41.89:621,42,0	0/1:29,0:28:41.85:42,0,653	0/1:19,0:19:99:194,0,143	0/0:32,0:32:87.21:0,87,1270	0/1:30,0:31:3.95:994,0,4	0/0:40,0:40:17.58:0,18,803	1/1:17,0:17:44.94:646,45,0
chr10	103637681	.	G	GTCTATCTATCTA	2625.12	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=1.281;DP=827;FS=4.454;HRun=0;HaplotypeScore=314.0324;InbreedingCoeff=0.6176;MQ=53.34;MQ0=18;MQRankSum=-4.234;QD=9.69;ReadPosRankSum=-5.829;VQSLOD=1.0738;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:90.80:0,91,2094	0/0:11,0:11:30.04:0,30,644	0/0:30,0:16:38.35:0,38,596	0/0:31,0:15:35.78:0,36,525	0/0:29,0:29:38.99:0,39,579	0/0:24,0:24:57.01:0,57,1638	0/0:20,0:20:57.15:0,57,1365	1/1:41,0:32:42.81:475,43,0	0/0:35,0:35:96.09:0,96,2209	0/0:41,0:41:99:0,120,2938	0/0:34,0:34:77.84:0,78,1859	0/0:32,0:32:75.20:0,75,981	0/0:27,0:26:47.85:0,48,642	0/0:23,0:23:45.12:0,45,600	0/1:37,0:36:7.15:7,0,360	0/1:28,0:28:99:124,0,571	0/0:34,0:32:72.08:0,72,2069	0/0:23,0:23:24.15:0,24,1013	1/1:5,3:6:9.48:282,9,0	1/1:32,6:39:32.19:368,32,0	1/1:20,0:19:17.87:251,18,0	0/0:27,0:27:35.75:0,36,486	0/0:28,0:27:75.16:0,75,1035	0/0:28,0:28:48.03:0,48,584	0/0:37,0:37:99:0,105,2698	0/1:37,0:37:99:506,0,1086	1/1:39,1:40:39.39:760,39,0	0/1:20,0:19:34.94:35,0,515
chr10	103637685	.	G	GTCTA	4410.05	PASS	AB=0.977;AC=30;AF=0.556;AN=54;BaseQRankSum=2.359;DP=813;FS=2.851;HRun=0;HaplotypeScore=194.1784;InbreedingCoeff=0.6789;MQ=53.26;MQ0=18;MQRankSum=-1.169;QD=9.21;ReadPosRankSum=-1.008;VQSLOD=3.7228;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:35.88:0,36,674	0/0:11,0:11:20.99:0,21,248	./.	0/0:31,0:14:5.99:0,6,52	1/1:28,0:28:3:25,3,0	0/0:24,0:24:39.12:0,39,584	0/0:20,0:21:33.07:0,33,438	1/1:35,0:26:19.08:131,19,0	0/0:35,0:35:47.72:0,48,655	0/0:41,0:41:54.17:0,54,816	0/0:32,0:32:41.99:0,42,619	1/1:15,16:32:33.11:781,33,0	1/1:14,13:27:9.01:212,9,0	1/1:10,14:25:18.06:426,18,0	1/1:37,0:36:14.85:121,15,0	1/1:29,0:29:14.97:142,15,0	0/0:33,0:32:34.08:0,34,656	0/1:23,0:23:3.95:4,0,307	1/1:8,0:5:6:76,6,0	1/1:39,0:39:49.96:455,50,0	1/1:18,0:17:17.97:247,18,0	0/1:26,0:26:0.21:0,0,0	0/1:26,3:28:14.34:419,0,14	1/1:8,21:29:11.15:756,11,0	0/0:34,0:34:60.19:0,60,904	0/1:37,0:37:10.29:267,0,10	1/1:36,0:37:21.04:321,21,0	1/1:19,0:18:3:27,3,0
chr10	103638008	.	CCTCTCTCTCTCTCTCT	C	768.23	PASS	AB=0.912;AC=12;AF=0.214;AN=56;BaseQRankSum=0.014;DP=557;FS=3.253;HRun=0;HaplotypeScore=212.7782;InbreedingCoeff=0.5787;MQ=69.49;MQ0=13;MQRankSum=-3.976;QD=5.05;ReadPosRankSum=-0.945;VQSLOD=2.4938;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:25.96:0,26,1354	0/0:17,0:17:14.46:0,14,326	0/0:23,0:15:2.98:0,3,21	0/1:36,0:19:0:0,0,0	1/1:15,0:15:14.89:148,15,0	0/0:19,0:20:24:0,24,336	0/0:22,0:22:23.95:0,24,300	0/0:27,0:27:8.22:0,8,61	0/0:13,0:13:15.04:0,15,820	0/0:14,0:14:18.04:0,18,547	0/1:8,0:8:0:0,0,0	0/0:6,0:11:12.01:0,12,466	0/0:13,0:14:24.50:0,24,1227	0/0:14,0:12:12.03:0,12,668	1/1:8,10:18:4.25:297,4,0	0/1:10,12:22:14.94:125,0,15	0/0:20,0:20:30.56:0,31,1322	0/0:22,0:22:36.01:0,36,1580	0/0:15,0:15:6:0,6,54	0/0:17,0:16:21.01:0,21,466	0/0:21,0:20:21.40:0,21,233	1/1:18,0:18:9.65:128,10,0	0/0:26,0:26:19.99:0,20,566	0/0:23,0:24:29.04:0,29,1416	0/0:22,0:22:30.07:0,30,928	0/1:18,0:16:99:152,0,144	0/0:20,0:19:21.03:0,21,587	1/1:17,0:14:8.59:68,9,0
chr10	103638485	.	C	CGAAT	6321.56	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-10.809;DP=787;FS=17.794;HRun=0;HaplotypeScore=117.7212;InbreedingCoeff=0.9638;MQ=67.08;MQ0=1;MQRankSum=1.323;QD=39.02;ReadPosRankSum=2.640;VQSLOD=3.7019;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,99,1519	0/0:13,0:13:33.07:0,33,493	0/0:20,0:16:27.05:0,27,351	0/0:13,0:13:11.39:0,11,101	1/1:2,25:27:62.99:1247,63,0	0/0:21,0:21:51.12:0,51,753	0/0:31,0:31:81.13:0,81,1231	0/0:36,0:36:72.09:0,72,969	0/0:50,0:50:99:0,123,1834	0/0:26,0:26:39.12:0,39,607	0/0:18,0:18:36.10:0,36,553	0/0:28,0:28:69.06:0,69,947	0/0:32,0:32:78.08:0,78,1118	0/0:34,0:34:90.23:0,90,1415	1/1:7,35:43:75.26:1854,75,0	1/1:7,21:29:5.82:1213,6,0	0/0:39,0:39:99:0,99,1564	0/0:19,0:19:42.09:0,42,619	0/0:26,0:26:39.03:0,39,523	0/0:31,0:31:78.13:0,78,1133	0/0:38,0:38:87.16:0,87,1297	1/1:10,18:29:46.14:807,46,0	0/0:21,0:21:48.15:0,48,768	0/0:34,0:34:78.23:0,78,1224	0/0:20,0:19:48.11:0,48,699	1/1:9,13:22:39.13:904,39,0	0/0:29,0:29:69.19:0,69,1089	1/1:5,7:12:12.04:297,12,0
chr10	103639584	.	A	AACACACACAC	3514.23	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=2.997;DP=733;FS=11.082;HRun=0;HaplotypeScore=225.2647;InbreedingCoeff=0.5762;MQ=66.99;MQ0=7;MQRankSum=-5.083;QD=10.55;ReadPosRankSum=-6.328;VQSLOD=-0.3034;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:43:30.22:0,30,1176	0/0:8,0:10:7.05:0,7,303	0/0:43,0:26:3:0,3,34	0/0:49,0:28:2.79:0,3,13	1/1:7,7:19:2.95:148,3,0	0/0:23,0:27:49.48:0,49,1168	0/0:33,0:35:3.90:0,4,1054	1/1:22,0:21:30.08:646,30,0	0/0:19,0:19:22.81:0,23,560	0/0:28,0:30:16.33:0,16,761	0/1:14,0:15:10.06:10,0,292	0/1:27,0:31:49.49:49,0,611	0/0:22,0:27:26.67:0,27,668	0/0:23,0:25:47.26:0,47,940	1/1:19,6:31:3.48:150,3,0	1/1:12,10:24:6.02:279,6,0	0/0:22,0:23:34.48:0,34,907	0/1:29,0:37:24.56:25,0,1071	1/1:17,0:17:22.61:490,23,0	1/1:13,0:13:6.02:93,6,0	1/1:39,0:37:20.95:275,21,0	1/1:21,6:30:3:129,3,0	0/0:11,0:13:18.06:0,18,498	0/0:38,0:42:64.39:0,64,1550	0/0:13,0:14:30.09:0,30,800	1/1:32,0:32:42.11:889,42,0	1/1:14,0:13:15.02:260,15,0	1/1:9,0:9:3.01:70,3,0
chr10	103640420	.	GCTTTT	G	405.23	PASS	AB=1.000;AC=10;AF=0.200;AN=50;BaseQRankSum=3.731;DP=621;FS=0.940;HRun=0;HaplotypeScore=133.2651;InbreedingCoeff=0.1591;MQ=63.97;MQ0=5;MQRankSum=-2.446;QD=2.41;ReadPosRankSum=-0.772;VQSLOD=2.5204;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:51.13:0,51,1067	0/0:9,0:9:12.02:0,12,218	./.	./.	0/0:24,0:24:9.02:0,9,102	0/0:24,0:24:18.05:0,18,375	0/0:21,0:20:9.03:0,9,217	./.	1/1:10,2:12:21.07:351,21,0	0/0:27,0:27:33.10:0,33,802	0/0:18,0:18:21.07:0,21,460	0/0:18,0:18:27.08:0,27,592	0/0:14,0:14:15.05:0,15,342	0/0:18,0:18:24.07:0,24,539	0/1:21,0:21:44.37:44,0,111	0/1:28,0:28:49.09:49,0,85	0/0:23,0:23:18.04:0,18,396	0/1:28,0:28:3.54:4,0,812	0/1:27,0:26:4.07:4,0,140	0/1:14,0:14:19.78:20,0,92	0/0:13,0:13:2.94:0,3,18	0/0:18,0:18:8.68:0,9,207	1/1:11,6:17:2.86:52,3,0	0/0:14,0:14:15.05:0,15,371	0/0:24,0:24:39.13:0,39,941	0/1:21,0:21:15.67:16,0,128	0/0:26,0:26:18.02:0,18,189	0/0:8,0:8:6.02:0,6,75
chr10	103640534	.	TTC	T	49.35	PASS	AB=0.902;AC=5;AF=0.089;AN=56;BaseQRankSum=2.153;DP=556;FS=27.028;HRun=0;HaplotypeScore=175.3645;InbreedingCoeff=-0.1076;MQ=46.85;MQ0=9;MQRankSum=-2.323;QD=0.50;ReadPosRankSum=-3.516;VQSLOD=0.2576;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:58.48:0,58,843	0/0:7,0:7:17.86:0,18,321	0/0:10,0:6:17.56:0,18,222	0/1:8,1:5:3.92:4,0,77	0/0:18,3:21:39.77:0,40,500	0/0:20,0:20:57.19:0,57,1028	0/0:20,1:20:57.14:0,57,917	0/0:30,0:22:50.57:0,51,474	0/0:19,0:18:28.51:0,29,800	0/0:23,0:23:65.41:0,65,1113	0/0:15,0:15:41.58:0,42,673	0/0:13,0:13:33:0,33,551	0/0:11,0:11:30.08:0,30,490	0/0:23,0:23:68.90:0,69,1024	0/0:26,2:28:2.44:0,2,416	0/1:13,9:22:32:32,0,426	0/0:28,0:28:71.02:0,71,1107	0/0:25,0:24:42.93:0,43,965	0/0:22,0:22:48.78:0,49,496	0/0:17,5:22:37.03:0,37,409	0/0:5,1:6:3.01:0,3,37	0/0:12,2:14:32.25:0,32,429	0/0:17,0:16:48.13:0,48,828	0/0:30,0:30:74.42:0,74,1291	0/0:28,0:28:60.30:0,60,1265	0/1:25,1:24:26.66:27,0,649	0/1:29,2:31:52.69:53,0,656	0/1:10,0:9:45.34:45,0,214
chr10	103640536	.	CCT	C	186.14	PASS	AB=0.979;AC=11;AF=0.212;AN=52;BaseQRankSum=6.109;DP=594;FS=1.766;HRun=0;HaplotypeScore=179.2108;InbreedingCoeff=0.0999;MQ=48.16;MQ0=14;MQRankSum=-3.848;QD=0.89;ReadPosRankSum=3.244;VQSLOD=2.5222;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,2:26:2.47:0,2,446	0/0:10,0:10:18.06:0,18,260	./.	0/1:12,0:6:0:0,0,0	1/1:23,0:23:1.25:3,1,0	0/0:22,0:24:51.13:0,51,701	0/0:21,0:20:27.04:0,27,357	0/0:30,0:25:2.96:0,3,19	0/0:19,1:19:2.47:0,2,460	0/0:23,0:23:30.25:0,30,418	0/0:16,0:16:21.07:0,21,298	0/0:15,0:15:24.08:0,24,356	0/0:12,0:13:15.98:0,16,390	0/1:22,1:24:64.41:64,0,244	0/0:29,0:28:19.72:0,20,199	0/0:22,0:22:3.20:0,3,69	0/0:32,0:32:48.08:0,48,667	0/1:24,1:24:31.10:31,0,409	0/1:21,0:21:9:9,0,36	1/1:23,0:23:5.99:52,6,0	./.	0/1:15,0:15:1.07:1,0,13	0/0:18,0:17:24.08:0,24,359	0/1:31,1:32:7.13:7,0,680	0/0:32,1:33:26.64:0,27,758	0/0:27,0:25:31.65:0,32,282	0/1:33,0:32:27.65:139,0,28	0/0:10,0:9:4.54:0,5,26
chr10	103640775	.	GAC	G	82.96	PASS	AB=0.967;AC=7;AF=0.125;AN=56;BaseQRankSum=13.355;DP=695;FS=0.000;HRun=0;HaplotypeScore=115.5514;InbreedingCoeff=0.1037;MQ=63.35;MQ0=6;MQRankSum=-2.378;QD=0.66;ReadPosRankSum=4.644;VQSLOD=1.7879;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,2402	0/0:7,0:7:21.06:0,21,345	0/0:31,0:21:47.06:0,47,851	0/0:35,0:27:71.79:0,72,1045	0/0:14,0:14:5.61:0,6,135	0/0:23,0:23:66.23:0,66,1132	0/0:29,0:29:78.25:0,78,1324	0/1:25,2:26:85.80:86,0,661	0/0:31,0:31:90.31:0,90,1572	0/0:26,0:26:78.27:0,78,1379	0/0:18,0:18:51.63:0,52,837	0/0:26,0:26:72.20:0,72,1169	0/0:27,0:27:78.25:0,78,1301	0/0:36,0:36:99:0,102,1723	0/1:31,0:31:15.16:15,0,152	0/1:18,0:18:8.21:8,0,76	0/0:37,1:38:93.32:0,93,1637	0/0:18,0:18:51.08:0,51,806	0/1:20,1:19:4.82:5,0,602	0/0:21,0:21:33.11:0,33,496	0/0:43,0:42:0.36:0,0,428	0/0:15,0:15:3.79:0,4,151	0/0:14,0:14:39.13:0,39,695	0/0:39,0:39:99:0,111,1921	0/0:14,0:14:39.13:0,39,697	0/0:19,0:19:16.91:0,17,412	0/1:18,1:19:70.98:71,0,416	1/1:9,0:9:7.09:18,7,0
chr10	103640777	.	CACAG	C	2653.12	PASS	AB=0.667;AC=13;AF=0.232;AN=56;BaseQRankSum=9.278;DP=700;FS=1.082;HRun=0;HaplotypeScore=133.0312;InbreedingCoeff=0.8467;MQ=62.36;MQ0=6;MQRankSum=0.382;QD=20.89;ReadPosRankSum=4.357;VQSLOD=3.5339;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,114,2703	0/0:7,0:7:18.06:0,18,409	0/0:32,0:22:12.04:0,12,235	0/0:35,0:27:27.09:0,27,470	1/1:4,10:14:15.03:227,15,0	0/0:24,0:24:48.16:0,48,1102	0/0:27,0:28:57.20:0,57,1324	0/0:24,0:25:35.84:0,36,428	0/0:31,0:31:66.23:0,66,1535	0/0:26,0:26:63.22:0,63,1474	0/0:18,0:18:30.57:0,31,695	0/0:25,0:25:51.17:0,51,1116	0/0:26,0:26:45.15:0,45,1076	0/0:37,0:37:69.24:0,69,1613	1/1:9,22:31:60.20:963,60,0	1/1:7,11:18:30.10:482,30,0	0/0:37,0:37:72.22:0,72,1679	0/0:18,0:18:39.13:0,39,851	0/0:20,0:22:31.22:0,31,409	1/1:19,0:22:0.94:2,1,0	0/0:33,0:44:17.82:0,18,216	1/1:7,8:15:24.08:375,24,0	0/0:15,0:15:36.12:0,36,798	0/0:39,0:39:90.25:0,90,1959	0/0:14,0:14:39.13:0,39,835	0/1:9,9:18:99:396,0,111	0/0:15,0:20:33.32:0,33,428	1/1:0,9:9:24.08:385,24,0
chr10	103640838	.	GCA	G	778.27	PASS	AB=0.901;AC=13;AF=0.232;AN=56;BaseQRankSum=4.677;DP=617;FS=0.603;HRun=0;HaplotypeScore=112.0069;InbreedingCoeff=0.3723;MQ=56.51;MQ0=9;MQRankSum=0.815;QD=4.45;ReadPosRankSum=-0.902;VQSLOD=2.6721;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,1:42:44.91:0,45,1172	0/0:9,0:9:21.06:0,21,315	0/0:26,0:7:5.21:0,5,132	0/0:30,0:11:20.24:0,20,193	0/0:4,0:8:5.80:0,6,40	0/1:24,1:25:41.78:42,0,825	0/1:27,4:31:38.44:38,0,850	1/1:15,9:24:30.70:366,31,0	0/0:26,0:27:22.16:0,22,719	0/0:26,1:27:23.63:0,24,767	0/0:20,0:20:42.09:0,42,577	0/0:25,0:25:57.17:0,57,870	0/0:21,0:21:54.07:0,54,754	0/0:30,1:31:8.45:0,8,1012	0/0:15,0:16:3.46:0,3,24	0/0:17,0:20:12.46:0,12,140	0/0:38,0:38:87.24:0,87,1329	0/0:16,0:16:48.11:0,48,721	1/1:9,1:7:8.76:57,9,0	1/1:4,8:13:5.85:78,6,0	1/1:15,11:26:17.72:218,18,0	0/0:8,0:11:2.99:0,3,24	0/0:17,0:17:48.13:0,48,716	0/0:43,0:43:60.61:0,61,1304	0/0:14,0:14:2.74:0,3,521	0/1:9,1:14:10.38:10,0,222	0/1:13,8:21:33.78:127,0,34	0/1:10,0:10:3.75:4,0,14
chr10	103640857	.	CGT	C	1433.90	PASS	AB=0.874;AC=16;AF=0.286;AN=56;BaseQRankSum=10.278;DP=652;FS=12.126;HRun=0;HaplotypeScore=109.7266;InbreedingCoeff=0.3997;MQ=50.95;MQ0=16;MQRankSum=-5.327;QD=7.88;ReadPosRankSum=-4.207;VQSLOD=1.7150;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,100,1775	0/0:9,0:9:24.08:0,24,455	0/0:49,0:13:38.67:0,39,600	0/0:48,1:17:47.90:0,48,799	0/1:7,0:7:7.52:70,0,8	0/0:25,0:25:71.13:0,71,1259	0/0:31,0:31:86.30:0,86,1518	0/1:20,9:29:99:253,0,337	0/0:20,0:20:60.03:0,60,1104	0/0:25,0:25:39.41:0,39,1202	0/0:22,0:22:57.19:0,57,1070	0/0:23,0:23:65.59:0,66,1222	0/0:19,0:19:51.17:0,51,994	0/0:27,0:27:77.54:0,78,1433	1/1:10,0:10:11.88:146,12,0	0/1:19,1:19:39.41:137,0,39	0/0:38,0:38:99:0,108,2027	0/0:20,0:20:57.02:0,57,1045	0/1:15,8:17:99:276,0,101	1/1:13,1:14:4.05:50,4,0	0/1:22,3:24:25.02:63,0,25	1/1:9,3:12:9:96,9,0	0/0:21,0:21:60.21:0,60,1148	0/0:39,0:39:99:0,111,2012	0/0:18,0:18:47.99:0,48,871	0/1:15,2:17:99:220,0,119	1/1:12,9:21:6.73:229,7,0	1/1:4,0:3:5.98:67,6,0
chr10	103641263	.	GAACAGA	G	6576.84	PASS	AB=0.545;AC=20;AF=0.357;AN=56;BaseQRankSum=16.103;DP=567;FS=20.997;HRun=0;HaplotypeScore=164.3268;InbreedingCoeff=0.8295;MQ=84.18;MQ0=0;MQRankSum=-14.923;QD=43.85;ReadPosRankSum=0.398;VQSLOD=3.4002;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,4695	0/0:14,0:14:42.14:0,42,1557	0/0:15,0:15:45.13:0,45,1508	0/0:24,0:24:72.21:0,72,2392	1/1:2,16:18:15.04:227,15,0	0/0:22,0:22:66.19:0,66,2051	0/0:27,0:27:81.28:0,81,2907	1/1:1,11:12:36.12:758,36,0	0/0:15,0:15:45.15:0,45,1694	0/0:21,0:21:63.22:0,63,2361	0/0:10,0:10:30.10:0,30,1089	0/0:40,0:40:99:0,120,4355	0/0:32,0:32:96.33:0,96,3330	0/0:29,0:29:87.30:0,87,3185	1/1:1,14:15:42.13:822,42,0	0/1:4,20:24:43.74:1204,0,44	0/0:24,0:24:72.25:0,72,2686	0/0:33,0:33:99:0,99,3608	1/1:0,10:10:27.09:559,27,0	1/1:3,12:15:32.76:594,33,0	1/1:0,8:8:12.04:251,12,0	1/1:2,12:14:15.05:273,15,0	0/0:20,0:20:60.21:0,60,2258	0/0:32,0:32:96.33:0,96,3457	0/0:15,0:15:45.15:0,45,1623	0/1:3,15:18:58.86:956,0,59	1/1:0,12:12:33.11:698,33,0	1/1:0,4:4:12.04:234,12,0
chr10	103641271	.	GAA	G	1546.46	PASS	AB=0.514;AC=20;AF=0.357;AN=56;BaseQRankSum=15.546;DP=554;FS=14.729;HRun=2;HaplotypeScore=132.2356;InbreedingCoeff=0.8433;MQ=87.88;MQ0=0;MQRankSum=-15.365;QD=11.37;ReadPosRankSum=2.773;VQSLOD=-0.5319;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,2499	0/0:15,0:15:45.14:0,45,873	0/0:19,0:19:57.19:0,57,1098	0/0:25,0:25:72.25:0,72,1443	1/1:0,16:16:8.77:64,9,0	0/0:20,0:20:60.18:0,60,1168	0/0:28,0:28:84.29:0,84,1707	1/1:0,11:11:32.72:227,33,0	0/0:15,0:15:45.15:0,45,900	0/0:25,0:25:75.25:0,75,1481	0/0:10,0:10:27.07:0,27,480	0/0:39,0:39:99:0,117,2331	0/0:29,0:29:87.30:0,87,1765	0/0:28,0:28:84.29:0,84,1705	1/1:0,14:14:35.64:210,36,0	0/1:1,20:21:1.71:288,0,2	0/0:26,0:26:78.24:0,78,1535	0/0:33,0:33:99:0,99,2004	1/1:1,8:9:23.82:169,24,0	1/1:0,12:12:26.32:154,26,0	1/1:0,8:8:11.73:71,12,0	1/1:1,12:13:5.82:46,6,0	0/0:20,0:20:60.21:0,60,1219	0/0:31,0:31:93.32:0,93,1878	0/0:14,0:14:42.14:0,42,854	0/1:1,15:16:13.58:243,0,14	1/1:0,12:12:32.29:197,32,0	1/1:0,4:4:11.83:85,12,0
chr10	103641274	.	CAG	C	2131.47	PASS	AB=0.516;AC=21;AF=0.375;AN=56;BaseQRankSum=15.954;DP=565;FS=9.921;HRun=0;HaplotypeScore=131.4473;InbreedingCoeff=0.8767;MQ=88.00;MQ0=0;MQRankSum=-14.779;QD=15.12;ReadPosRankSum=2.084;VQSLOD=3.3348;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,2589	0/0:14,0:14:42.10:0,42,789	0/0:21,0:21:60.05:0,60,1062	0/0:24,0:24:72.19:0,72,1342	1/1:0,16:16:8.93:92,9,0	0/0:20,0:20:60.19:0,60,1168	0/0:29,0:29:87.30:0,87,1741	1/1:0,13:13:38.86:301,39,0	0/0:16,0:16:45.14:0,45,878	0/0:24,0:24:72.24:0,72,1427	0/0:8,0:8:21.07:0,21,427	0/0:38,0:38:99:0,114,2313	0/0:32,0:32:96.31:0,96,1905	0/0:28,0:28:84.27:0,84,1666	1/1:2,14:16:43:310,43,0	1/1:2,20:22:3.02:411,3,0	0/0:26,0:26:78.24:0,78,1529	0/0:33,0:33:99:0,99,1990	1/1:0,8:8:23.95:194,24,0	1/1:0,12:12:26.85:198,27,0	1/1:2,8:10:14.90:109,15,0	1/1:0,12:12:9.83:68,10,0	0/0:20,0:20:60.21:0,60,1206	0/0:33,0:33:99:0,99,1930	0/0:14,0:14:42.14:0,42,853	0/1:1,15:16:13.15:297,0,13	1/1:0,12:12:32.83:246,33,0	1/1:0,4:4:11.97:116,12,0
chr10	103641791	.	T	TG	1406.75	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-7.521;DP=572;FS=0.582;HRun=6;HaplotypeScore=66.1627;InbreedingCoeff=0.9655;MQ=84.21;MQ0=1;MQRankSum=-2.943;QD=24.68;ReadPosRankSum=-1.749;VQSLOD=2.8348;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:96.20:0,96,979	0/0:6,0:6:18.04:0,18,183	0/0:16,0:15:32.74:0,33,310	0/0:21,0:21:39.56:0,40,463	0/0:11,0:11:30.05:0,30,299	0/0:23,0:23:46.25:0,46,615	0/0:35,0:35:90.17:0,90,909	1/1:3,5:8:12.03:140,12,0	0/0:27,0:27:75.15:0,75,755	0/0:23,0:23:51.09:0,51,508	0/0:13,0:13:39.08:0,39,394	0/0:32,0:32:90.20:0,90,918	0/0:16,0:16:39.08:0,39,398	0/0:35,0:35:99:0,102,1023	0/0:24,0:24:66.14:0,66,673	0/0:21,0:21:63.13:0,63,636	0/0:39,0:39:99:0,108,1101	0/0:22,0:22:57.12:0,57,581	1/1:2,5:7:15.05:188,15,0	1/1:2,3:5:9.03:113,9,0	1/1:3,28:31:75.24:943,75,0	0/0:15,0:15:45.09:0,45,451	0/0:13,0:13:36.07:0,36,362	0/0:36,0:36:99:0,102,1040	0/0:9,0:9:17.95:0,18,170	0/0:28,0:28:78.17:0,78,789	1/1:0,6:6:15.05:189,15,0	0/0:10,0:10:18.04:0,18,184
chr10	103642550	.	TA	T	5809.82	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.435;DP=616;FS=4.879;HRun=7;HaplotypeScore=71.6064;InbreedingCoeff=0.9996;MQ=84.22;MQ0=0;MQRankSum=-0.872;QD=25.82;ReadPosRankSum=-0.255;VQSLOD=5.4051;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1490	0/0:9,0:9:27.09:0,27,340	0/0:21,0:21:51.10:0,51,602	0/0:19,0:19:47.62:0,48,511	1/1:3,24:27:69.11:693,69,0	0/0:18,0:18:51.12:0,51,623	0/0:24,0:24:72.05:0,72,870	1/1:1,25:26:75.12:747,75,0	0/0:21,0:21:63.19:0,63,780	0/0:24,0:24:69.13:0,69,833	0/0:23,0:23:57.16:0,57,693	0/0:25,0:25:69.22:0,69,868	0/0:21,0:21:57.17:0,57,703	0/0:24,0:24:66.21:0,66,830	1/1:1,19:20:48.11:490,48,0	1/1:1,22:23:66.15:673,66,0	0/0:28,0:28:69.19:0,69,840	0/0:19,0:19:57.18:0,57,717	1/1:4,14:18:42.07:415,42,0	1/1:0,18:18:51.11:520,51,0	1/1:3,16:19:42.09:428,42,0	1/1:0,13:13:33.08:337,33,0	0/0:17,0:17:48.07:0,48,583	0/0:20,0:20:54.16:0,54,666	0/0:36,0:36:99:0,102,1283	1/1:3,21:24:28.38:591,28,0	1/1:1,26:27:60.13:609,60,0	1/1:0,10:10:30.07:306,30,0
chr10	103645947	.	GA	G	7259.78	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=11.417;DP=581;FS=3.221;HRun=4;HaplotypeScore=59.0994;InbreedingCoeff=0.9875;MQ=84.94;MQ0=0;MQRankSum=-7.025;QD=31.70;ReadPosRankSum=1.625;VQSLOD=5.4755;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.29:0,90,1243	0/0:6,0:6:18.06:0,18,252	0/0:26,0:26:60.84:0,61,864	0/0:22,1:22:37.57:0,38,717	1/1:0,6:6:18.06:216,18,0	0/0:27,0:27:78.25:0,78,1073	0/0:20,0:20:60.20:0,60,836	1/1:1,25:26:69.17:800,69,0	0/0:16,0:16:45.15:0,45,630	0/0:18,0:18:54.18:0,54,756	0/0:7,0:7:18.05:0,18,236	0/0:31,0:31:90.28:0,90,1229	0/0:21,0:21:63.21:0,63,878	0/0:20,0:20:60.20:0,60,840	1/1:0,28:28:78.08:936,78,0	1/1:2,34:36:96.29:1152,96,0	0/0:23,0:23:63.21:0,63,882	0/0:25,0:25:72.18:0,72,968	1/1:1,12:13:33.10:389,33,0	1/1:2,10:12:30.09:360,30,0	1/1:4,46:50:99:1476,123,0	1/1:0,8:8:21.06:252,21,0	0/0:16,0:16:42.13:0,42,569	0/0:24,0:24:66.22:0,66,922	0/0:16,0:16:45.15:0,45,630	1/1:0,19:19:57.16:673,57,0	1/1:0,27:27:75.18:899,75,0	1/1:1,3:4:9.03:108,9,0
chr10	103647118	.	C	CTGAG	17343.29	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-13.826;DP=751;FS=2.058;HRun=0;HaplotypeScore=121.4528;InbreedingCoeff=0.9987;MQ=82.93;MQ0=0;MQRankSum=-8.434;QD=60.43;ReadPosRankSum=-1.690;VQSLOD=6.1406;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,138,2541	0/0:12,0:12:36.12:0,36,661	0/0:32,0:32:84.24:0,84,1485	0/0:23,0:23:54.18:0,54,932	1/1:4,15:19:39.13:971,39,0	0/0:25,0:25:69.22:0,69,1255	0/0:30,0:30:84.29:0,84,1559	1/1:4,18:25:69.17:1634,69,0	0/0:22,0:22:63.22:0,63,1175	0/0:22,0:22:66.21:0,66,1142	0/0:11,0:11:30.10:0,30,548	0/0:35,0:35:99:0,105,1863	0/0:31,0:31:90.31:0,90,1677	0/0:31,0:31:90.28:0,90,1617	1/1:4,23:29:57.20:1482,57,0	1/1:7,29:36:90.24:2280,90,0	0/0:28,0:28:84.29:0,84,1566	0/0:39,0:39:99:0,111,1997	1/1:8,19:27:81.28:1996,81,0	1/1:4,18:22:51.18:1336,51,0	1/1:6,40:49:99:2711,105,0	1/1:4,13:19:36.12:959,36,0	0/0:16,0:16:48.15:0,48,864	0/0:41,0:41:99:0,108,2014	0/0:17,0:17:45.15:0,45,829	1/1:5,28:35:40.30:2241,40,0	1/1:2,17:19:47.91:1253,48,0	1/1:1,6:7:18.06:480,18,0
chr10	103650100	.	TC	T	6026.56	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=10.678;DP=605;FS=2.918;HRun=5;HaplotypeScore=81.1886;InbreedingCoeff=0.9979;MQ=73.94;MQ0=5;MQRankSum=-0.069;QD=27.15;ReadPosRankSum=2.438;VQSLOD=4.9002;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.27:0,84,1130	0/0:8,0:8:18.06:0,18,246	0/0:33,0:23:23.13:0,23,357	0/0:40,0:25:29.39:0,29,492	1/1:3,22:25:57.16:645,57,0	0/0:21,0:21:48.15:0,48,641	0/0:21,0:21:48.09:0,48,633	1/1:1,14:15:33.09:374,33,0	0/0:28,0:28:78.23:0,78,1034	0/0:17,0:16:33.11:0,33,448	0/0:15,0:15:42.13:0,42,559	0/0:25,0:25:72.21:0,72,962	0/0:20,0:20:54.16:0,54,719	0/0:18,0:18:54.17:0,54,721	1/1:4,16:20:42.59:476,43,0	1/1:1,13:14:33.09:374,33,0	0/0:17,0:17:45.12:0,45,596	0/0:21,0:21:63.19:0,63,843	1/1:2,10:12:30.09:340,30,0	1/1:2,10:11:24.07:272,24,0	1/1:7,37:43:99:1123,99,0	1/1:0,19:19:48.14:544,48,0	0/0:15,0:15:42.13:0,42,559	0/0:31,0:31:81:0,81,1097	0/0:20,0:19:48.14:0,48,624	1/1:1,18:19:54.09:585,54,0	1/1:0,22:22:57.07:646,57,0	1/1:1,19:20:57.16:646,57,0
chr10	103650605	.	TCCCAGC	T	2291.37	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=8.665;DP=361;FS=1.375;HRun=0;HaplotypeScore=82.2430;InbreedingCoeff=0.8405;MQ=82.80;MQ0=1;MQRankSum=-7.430;QD=23.15;ReadPosRankSum=0.872;VQSLOD=3.3887;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:18.06:0,18,581	0/0:4,0:4:9.03:0,9,290	0/0:16,0:15:17.09:0,17,353	0/1:14,0:13:40.23:40,0,182	1/1:6,8:14:11.95:131,12,0	0/0:11,0:11:24.08:0,24,744	0/0:14,0:14:27.09:0,27,895	0/0:9,0:9:12.04:0,12,349	0/0:11,0:11:21.06:0,21,621	0/0:13,0:13:18.06:0,18,580	0/0:6,0:6:12.04:0,12,391	0/0:10,0:10:27.09:0,27,832	0/0:11,0:11:18.06:0,18,543	0/0:15,0:15:39.13:0,39,1232	1/1:3,18:21:39.13:825,39,0	1/1:2,6:9:15.05:310,15,0	0/0:32,0:32:72.25:0,72,2359	0/0:13,0:13:33.11:0,33,1084	0/0:9,0:9:15.04:0,15,407	0/0:8,0:8:12.04:0,12,398	0/0:26,0:26:42.14:0,42,1337	1/1:5,7:12:21.07:444,21,0	0/0:7,0:7:12.02:0,12,321	0/0:12,0:12:21.07:0,21,697	0/0:12,0:12:24.08:0,24,793	1/1:7,8:15:21.07:409,21,0	0/0:11,0:11:18.06:0,18,584	1/1:3,11:14:15.05:317,15,0
chr10	103652030	.	C	CT	3046.15	PASS	AB=0.538;AC=11;AF=0.196;AN=56;BaseQRankSum=11.954;DP=536;FS=8.621;HRun=0;HaplotypeScore=102.2015;InbreedingCoeff=0.8751;MQ=70.20;MQ0=1;MQRankSum=-10.803;QD=27.69;ReadPosRankSum=1.030;VQSLOD=3.3599;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,1886	0/0:3,0:3:9.03:0,9,126	0/0:18,0:17:33.58:0,34,638	0/0:18,0:14:41.39:0,41,502	1/1:2,19:21:51.24:609,51,0	0/0:15,0:15:45.15:0,45,629	0/0:20,0:20:57.19:0,57,797	0/0:26,0:26:60:0,60,651	0/0:19,0:19:54.18:0,54,748	0/0:24,0:24:69.22:0,69,944	0/0:18,0:18:54.18:0,54,754	0/0:16,0:16:45.13:0,45,596	0/0:13,0:13:39.13:0,39,533	0/0:20,0:20:60.20:0,60,838	1/1:4,23:27:75.44:842,75,0	1/1:3,10:13:35.90:405,36,0	0/0:20,0:20:57.19:0,57,797	0/0:23,0:23:65.71:0,66,890	0/0:19,0:19:50.82:0,51,517	0/0:31,0:31:86.84:0,87,963	0/0:17,0:17:44.76:0,45,469	1/1:0,17:18:36.37:486,36,0	0/0:12,0:12:36.12:0,36,501	0/0:19,0:19:57.19:0,57,797	0/0:14,0:14:42.14:0,42,586	0/1:3,18:21:29.65:502,0,30	0/0:15,0:15:44.95:0,45,455	1/1:0,10:10:30.10:380,30,0
chr10	103652032	.	G	GT	4132.44	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=16.434;DP=539;FS=9.067;HRun=0;HaplotypeScore=97.9616;InbreedingCoeff=0.9150;MQ=70.12;MQ0=2;MQRankSum=-6.048;QD=19.31;ReadPosRankSum=1.178;VQSLOD=5.2561;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,1879	0/0:3,0:3:9.03:0,9,125	0/0:19,0:17:36.24:0,36,584	0/0:21,0:16:33:0,33,482	1/1:21,0:21:51.22:281,51,0	0/0:17,0:17:45.15:0,45,625	0/0:21,0:21:63.19:0,63,860	1/1:14,13:27:37.53:480,38,0	0/0:18,0:18:54.09:0,54,730	0/0:25,0:25:72.23:0,72,986	0/0:19,0:19:54.17:0,54,738	0/0:15,0:15:42.13:0,42,568	0/0:13,0:13:39.11:0,39,520	0/0:20,0:20:60.20:0,60,838	1/1:28,0:28:61.25:345,61,0	1/1:14,0:13:26.78:169,27,0	0/0:20,0:20:60.20:0,60,833	0/0:22,0:22:63.21:0,63,879	1/1:1,12:13:36.58:419,37,0	1/1:3,27:30:77.24:931,77,0	1/1:2,16:18:26.75:405,27,0	1/1:17,0:17:43.15:246,43,0	0/0:13,0:13:39.11:0,39,506	0/0:20,0:20:57.19:0,57,795	0/0:13,0:13:39.13:0,39,543	0/1:21,0:21:33.33:179,0,33	1/1:0,15:15:45.13:520,45,0	1/1:10,0:10:28.93:157,29,0
chr10	103652037	.	T	TTTTG	4691.54	PASS	AB=0.811;AC=12;AF=0.214;AN=56;BaseQRankSum=7.347;DP=561;FS=2.685;HRun=0;HaplotypeScore=130.5754;InbreedingCoeff=0.7555;MQ=67.19;MQ0=4;MQRankSum=-9.717;QD=30.66;ReadPosRankSum=-0.356;VQSLOD=4.9603;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,114,1819	0/0:3,0:3:3.01:0,3,49	0/0:20,0:17:20.22:0,20,327	0/0:21,0:16:17.70:0,18,194	1/1:12,10:30:51.04:916,51,0	0/0:17,0:17:33.09:0,33,504	0/0:21,0:21:48.14:0,48,734	0/1:27,0:26:7.28:7,0,95	0/0:19,0:19:48.15:0,48,743	0/0:24,0:24:60.14:0,60,890	0/0:18,0:18:27.01:0,27,371	0/0:15,0:15:36.11:0,36,535	0/0:11,0:11:27.09:0,27,441	0/0:19,0:19:51.17:0,51,812	1/1:8,17:31:54.18:1158,54,0	1/1:6,5:12:21.05:386,21,0	0/0:22,0:22:60.18:0,60,932	0/0:22,0:22:51.13:0,51,801	0/0:20,0:19:9.10:0,9,118	0/0:29,0:29:39.81:0,40,231	0/0:19,0:19:30.79:0,31,146	1/1:9,10:19:42.06:748,42,0	0/0:10,0:10:18.06:0,18,281	0/0:20,0:20:57.18:0,57,910	0/0:13,0:13:30.10:0,30,492	0/1:9,14:23:38.47:1009,0,38	0/0:19,0:19:47.23:0,47,226	1/1:3,7:10:21.07:468,21,0
chr10	103654177	.	T	TC	4083.35	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-0.276;DP=675;FS=9.466;HRun=6;HaplotypeScore=72.1923;InbreedingCoeff=0.9996;MQ=84.46;MQ0=1;MQRankSum=-1.576;QD=30.93;ReadPosRankSum=1.280;VQSLOD=3.9446;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,126,1275	0/0:14,0:14:39.09:0,39,398	0/0:23,0:23:51.04:0,51,496	0/0:21,0:21:47.61:0,48,480	1/1:2,13:15:36.12:452,36,0	0/0:29,0:29:75.16:0,75,765	0/0:20,0:20:51.10:0,51,514	0/0:27,0:27:63.13:0,63,638	0/0:33,0:33:96.22:0,96,979	0/0:23,0:23:69.16:0,69,704	0/0:15,0:15:33.07:0,33,336	0/0:27,0:27:81.18:0,81,826	0/0:29,0:29:81.16:0,81,818	0/0:34,0:34:96.21:0,96,979	1/1:1,21:22:54.17:679,54,0	1/1:4,20:25:60.02:732,60,0	0/0:23,0:23:57.12:0,57,582	0/0:26,0:26:69.13:0,69,697	0/0:18,0:18:42.09:0,42,428	0/0:23,0:23:57.09:0,57,568	0/0:23,0:22:60.12:0,60,606	1/1:1,17:18:48.15:597,48,0	0/0:20,0:20:54.12:0,54,550	0/0:11,0:11:33.04:0,33,327	0/0:28,0:28:75.16:0,75,764	1/1:2,29:31:26.03:944,26,0	0/0:26,0:26:66.15:0,66,673	1/1:2,19:21:54.17:679,54,0
chr10	103656520	.	GCT	G	1423.11	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.012;DP=536;FS=16.906;HRun=0;HaplotypeScore=105.0791;InbreedingCoeff=0.9233;MQ=72.88;MQ0=10;MQRankSum=-2.873;QD=25.41;ReadPosRankSum=1.194;VQSLOD=3.6706;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.29:0,84,1413	0/0:4,0:3:9.03:0,9,152	0/0:45,0:24:2.52:0,3,199	0/0:69,0:29:24.97:0,25,207	1/1:2,11:13:21.01:252,21,0	0/0:13,0:13:33.11:0,33,553	0/0:24,0:24:66.19:0,66,1072	0/0:25,0:25:56.98:0,57,880	0/0:17,0:17:51.14:0,51,812	0/0:26,0:25:63.20:0,63,1042	0/0:15,0:14:39.13:0,39,655	0/0:18,0:18:48.15:0,48,780	0/0:25,0:25:68.93:0,69,1152	0/0:21,0:21:51.04:0,51,828	1/1:3,11:13:30.01:386,30,0	1/1:2,11:13:32.94:428,33,0	0/0:23,0:23:32.37:0,32,955	0/0:12,0:12:23.83:0,24,304	0/0:9,0:9:23.41:0,23,356	0/0:6,0:6:18.05:0,18,280	0/0:22,0:22:35.77:0,36,520	1/1:2,3:5:9.03:111,9,0	0/0:12,0:12:36.12:0,36,607	0/0:32,0:32:42.82:0,43,1229	0/0:16,0:16:39.13:0,39,657	1/1:0,8:8:24.08:312,24,0	0/0:16,0:16:36.12:0,36,610	1/1:1,2:3:9.03:115,9,0
chr10	103656544	.	CCT	C	2407.02	PASS	AB=0.976;AC=25;AF=0.446;AN=56;BaseQRankSum=7.955;DP=565;FS=4.582;HRun=0;HaplotypeScore=98.3197;InbreedingCoeff=0.7675;MQ=62.90;MQ0=21;MQRankSum=-3.017;QD=10.99;ReadPosRankSum=-2.476;VQSLOD=2.7031;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:34:22.68:0,23,903	0/0:6,0:5:12.04:0,12,183	0/1:49,0:20:0.99:1,0,127	0/0:77,0:19:12.01:0,12,183	1/1:5,9:14:6.02:75,6,0	0/1:15,0:15:4.10:4,0,449	0/0:25,0:25:54.02:0,54,788	1/1:6,18:24:41.96:468,42,0	0/0:17,0:17:39.13:0,39,641	0/0:20,0:19:45.14:0,45,698	0/0:18,0:17:33.09:0,33,511	0/0:17,0:17:35.79:0,36,553	0/0:24,0:24:53.70:0,54,880	0/0:22,0:21:42.10:0,42,635	1/1:6,8:13:23.92:279,24,0	1/1:6,10:15:29.85:374,30,0	0/0:25,1:26:57.56:0,58,884	0/0:10,0:10:17.92:0,18,250	1/1:4,7:11:24.07:291,24,0	1/1:0,5:5:15.05:188,15,0	1/1:4,19:22:21.07:263,21,0	1/1:4,1:4:2.98:26,3,0	0/1:12,1:13:13.47:13,0,263	0/0:32,0:32:19.13:0,19,808	0/0:16,0:17:42.12:0,42,668	1/1:5,7:12:26.74:288,27,0	1/1:5,9:14:23.29:270,23,0	1/1:3,1:3:6.02:75,6,0
chr10	103656572	.	G	GCTCT	1012.53	PASS	AB=0.964;AC=31;AF=0.738;AN=42;BaseQRankSum=-1.968;DP=592;FS=1.379;HRun=0;HaplotypeScore=127.5968;InbreedingCoeff=0.1624;MQ=56.62;MQ0=18;MQRankSum=-0.541;QD=2.55;ReadPosRankSum=-1.519;VQSLOD=1.7373;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,13:42:6.02:112,6,0	1/1:8,0:8:3.01:45,3,0	./.	./.	0/0:18,0:19:5.75:0,6,74	0/1:14,0:15:2.79:3,0,43	0/1:22,0:23:9.16:9,0,43	./.	1/1:17,0:20:2.71:32,3,0	1/1:20,0:20:9.70:139,10,0	./.	1/1:19,4:22:3.01:70,3,0	1/1:23,0:22:1.25:3,1,0	1/1:24,0:32:2.80:13,3,0	0/1:12,0:12:0:0,0,0	1/1:16,0:16:5.95:61,6,0	1/1:22,0:21:12.78:249,13,0	1/1:11,0:11:9.03:143,9,0	./.	./.	0/1:16,0:16:0:0,0,0	1/1:9,0:9:2.74:12,3,0	0/1:22,0:21:0:0,0,0	0/1:25,8:36:4.26:64,0,4	1/1:20,0:20:3.01:47,3,0	0/1:19,0:17:18.61:120,0,19	0/0:10,0:10:2.60:0,3,10	./.
chr10	103656944	.	TG	T	4410.87	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.799;DP=709;FS=0.357;HRun=4;HaplotypeScore=86.0057;InbreedingCoeff=0.9993;MQ=81.07;MQ0=0;MQRankSum=-2.362;QD=30.85;ReadPosRankSum=2.437;VQSLOD=5.2439;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1555	0/0:8,0:8:24.08:0,24,334	0/0:18,0:18:39.55:0,40,605	0/0:22,0:23:49.11:0,49,573	1/1:3,29:32:72.15:843,72,0	0/0:21,0:21:60.20:0,60,839	0/0:35,0:35:95.86:0,96,1306	0/0:28,0:28:81.25:0,81,1102	0/0:30,0:30:90.29:0,90,1245	0/0:24,0:24:66.20:0,66,867	0/0:12,0:12:30.10:0,30,412	0/0:25,0:25:75.14:0,75,1003	0/0:28,0:28:84.27:0,84,1156	0/0:25,0:25:72.23:0,72,980	1/1:0,31:31:87.27:1044,87,0	1/1:1,21:22:57.17:684,57,0	0/0:25,0:25:75.23:0,75,1031	0/0:30,0:30:90.29:0,90,1240	0/0:27,0:27:78.25:0,78,1070	0/0:18,0:18:54.18:0,54,756	0/0:66,0:66:99:0,190,2538	1/1:1,22:23:57.13:665,57,0	0/0:11,0:11:30.06:0,30,396	0/0:30,0:30:81.27:0,81,1134	0/0:15,0:15:42.14:0,42,588	1/1:1,24:25:69.19:815,69,0	0/0:27,0:27:81.21:0,81,1062	1/1:0,10:10:30.09:360,30,0
chr10	103657221	.	GT	G	1646.40	PASS	AB=0.721;AC=10;AF=0.179;AN=56;BaseQRankSum=2.570;DP=651;FS=5.903;HRun=12;HaplotypeScore=96.0499;InbreedingCoeff=0.5458;MQ=70.68;MQ0=1;MQRankSum=0.315;QD=11.43;ReadPosRankSum=0.436;VQSLOD=3.2781;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,1:49:87.70:0,88,997	0/0:11,0:12:29.89:0,30,288	0/1:9,3:12:59.22:70,0,59	0/0:13,0:12:17.38:0,17,119	0/0:6,0:32:72.12:0,72,372	0/0:15,1:20:21.49:0,21,354	0/0:29,1:31:36.85:0,37,539	0/1:14,19:34:34.24:414,0,34	0/0:14,0:14:33.03:0,33,324	0/0:30,1:32:45.69:0,46,613	0/0:15,0:18:41.82:0,42,383	0/0:26,0:26:69.13:0,69,696	0/0:18,1:22:33.70:0,34,503	0/0:17,1:19:30.65:0,31,442	0/0:7,0:34:61.92:0,62,316	0/0:2,0:17:25.63:0,26,131	0/0:30,0:32:78.07:0,78,766	0/0:33,0:33:87.14:0,87,869	1/1:4,12:16:35.82:276,36,0	1/1:5,15:20:44.80:348,45,0	1/1:5,19:24:56.78:441,57,0	0/0:5,0:18:24.69:0,25,159	0/0:16,0:16:42.37:0,42,400	0/0:18,0:19:53.93:0,54,526	0/1:16,2:18:1.42:1,0,333	0/0:11,1:37:58.84:0,59,391	0/1:4,16:20:43.38:254,0,43	0/0:6,0:10:24.71:0,25,137
chr10	103658728	.	C	CATT	1190.49	PASS	AB=0.911;AC=21;AF=0.457;AN=46;BaseQRankSum=5.619;DP=295;FS=2.900;HRun=0;HaplotypeScore=52.3721;InbreedingCoeff=0.6076;MQ=59.70;MQ0=2;MQRankSum=-2.202;QD=11.13;ReadPosRankSum=-1.306;VQSLOD=2.8042;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:18:27.04:0,27,325	./.	./.	./.	1/1:12,0:12:6.02:73,6,0	0/0:26,0:26:45.15:0,45,593	0/0:8,0:8:3:0,3,25	0/0:33,0:33:20.40:0,20,152	1/1:6,4:10:6.02:116,6,0	./.	0/0:5,0:5:3.01:0,3,40	0/0:6,0:6:9.03:0,9,120	0/0:7,0:7:9.01:0,9,104	0/1:4,0:4:0:0,0,0	1/1:5,0:5:5.98:59,6,0	1/1:5,0:5:3.01:45,3,0	0/0:28,0:28:32.78:0,33,604	0/0:16,0:16:27.05:0,27,341	1/1:16,5:21:24.08:429,24,0	1/1:4,3:7:9:136,9,0	1/1:8,1:9:3.01:58,3,0	0/1:5,0:5:0:0,0,0	0/0:3,0:3:3.01:0,3,40	./.	0/0:15,0:15:27.08:0,27,344	1/1:5,0:5:6.02:77,6,0	0/1:7,4:10:11.96:161,0,12	1/1:13,0:12:15.05:194,15,0
chr10	103658755	.	T	TATTATC	1212.58	PASS	AB=1.000;AC=20;AF=0.385;AN=52;BaseQRankSum=8.082;DP=225;FS=0.000;HRun=0;HaplotypeScore=62.8042;InbreedingCoeff=0.4798;MQ=54.12;MQ0=3;MQRankSum=-2.176;QD=16.84;ReadPosRankSum=3.667;VQSLOD=2.2212;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:36.01:0,36,663	./.	0/1:6,0:3:0.86:1,0,16	0/0:2,0:1:2.97:0,3,20	1/1:3,5:8:11.31:243,11,0	0/0:24,0:24:66.15:0,66,1215	0/0:1,0:1:3.01:0,3,68	0/0:34,0:33:74.80:0,75,790	0/1:6,0:6:4.07:4,0,42	0/0:1,0:1:3:0,3,29	0/0:2,0:2:5.97:0,6,88	0/0:3,0:3:9.03:0,9,206	0/0:6,0:6:18.03:0,18,266	0/0:2,0:2:5.92:0,6,42	1/1:0,3:3:6.02:163,6,0	1/1:2,4:6:8.88:133,9,0	0/0:26,0:26:70.33:0,70,1268	0/0:17,0:17:48.05:0,48,770	0/1:17,0:17:70.49:70,0,129	1/1:4,0:4:5.48:25,5,0	1/1:1,0:1:2.74:12,3,0	1/1:1,0:1:2.94:18,3,0	0/0:3,0:3:6.01:0,6,96	./.	0/0:16,0:16:45.03:0,45,751	1/1:2,2:4:11.92:240,12,0	0/1:7,0:6:21.71:22,0,79	1/1:2,5:7:15.05:450,15,0
chr10	103658764	.	TATC	T	992.50	PASS	AB=0.991;AC=10;AF=0.185;AN=54;BaseQRankSum=6.297;DP=233;FS=0.000;HRun=0;HaplotypeScore=51.1787;InbreedingCoeff=0.0933;MQ=54.76;MQ0=1;MQRankSum=1.865;QD=12.41;ReadPosRankSum=-5.364;VQSLOD=1.8320;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:19.57:0,20,573	0/0:1,0:1:2.94:0,3,18	0/0:7,0:4:11.95:0,12,95	0/0:3,0:1:2.96:0,3,19	0/1:5,0:5:26.63:27,0,27	0/0:25,0:25:69.12:0,69,1119	0/0:3,0:3:8.99:0,9,74	1/1:3,32:34:95.11:831,95,0	0/0:7,0:7:15.01:0,15,175	0/0:2,0:2:6.01:0,6,57	0/0:4,0:4:11.93:0,12,113	0/0:3,0:3:9.03:0,9,201	0/0:8,0:8:18.02:0,18,275	0/0:2,0:2:6.01:0,6,79	0/0:3,0:3:2.38:0,2,16	0/1:5,0:5:10.07:27,0,10	0/0:25,0:25:75.07:0,75,1272	0/0:18,0:18:48.01:0,48,765	0/1:16,1:17:57.96:134,0,58	0/1:5,0:5:15.15:36,0,15	0/0:1,0:1:2.84:0,3,14	1/1:1,0:1:2.94:18,3,0	0/0:2,0:2:6.01:0,6,92	./.	0/0:18,0:18:51.02:0,51,776	0/1:4,0:4:24.39:27,0,24	0/1:8,0:7:33.26:33,0,64	0/0:7,0:7:14.59:0,15,88
chr10	103658769	.	TCAC	T	284.13	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=6.825;DP=234;FS=12.539;HRun=0;HaplotypeScore=55.4038;InbreedingCoeff=0.5598;MQ=59.21;MQ0=1;MQRankSum=-2.300;QD=3.89;ReadPosRankSum=-2.159;VQSLOD=0.0103;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:32.69:0,33,594	0/0:1,0:1:3.01:0,3,35	0/0:8,0:5:12:0,12,177	0/0:5,0:3:5.88:0,6,55	1/1:3,2:5:4.35:70,4,0	0/0:25,0:25:72.13:0,72,1278	0/0:3,0:3:6.02:0,6,99	1/1:33,0:32:19.39:135,19,0	0/0:7,0:7:15.05:0,15,287	0/0:2,0:2:6.02:0,6,110	0/0:4,0:4:12.02:0,12,155	0/0:3,0:3:9.03:0,9,207	0/0:7,0:7:21.05:0,21,384	0/0:2,0:2:6.02:0,6,106	1/1:3,0:3:3.41:18,3,0	1/1:2,2:4:6.02:77,6,0	0/0:28,0:28:81.11:0,81,1471	0/0:18,0:18:54.16:0,54,1008	0/1:16,0:16:17.44:17,0,189	0/0:5,0:5:4.67:0,5,83	0/0:2,0:2:6:0,6,65	1/1:0,1:1:3.01:37,3,0	0/0:2,0:2:6.02:0,6,118	./.	0/0:18,0:18:54.17:0,54,1006	1/1:2,2:4:7.74:79,8,0	0/0:8,0:7:6.91:0,7,185	1/1:7,0:7:1.63:4,2,0
chr10	103658782	.	CATCATA	C	274.71	PASS	AB=0.863;AC=8;AF=0.143;AN=56;BaseQRankSum=1.172;DP=250;FS=3.358;HRun=0;HaplotypeScore=72.1678;InbreedingCoeff=-0.0293;MQ=61.24;MQ0=0;MQRankSum=-2.581;QD=6.10;ReadPosRankSum=-2.360;VQSLOD=1.3554;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:44.59:0,45,1093	0/0:1,0:1:3.01:0,3,89	0/0:9,0:7:8.52:0,9,240	0/0:7,0:3:6.01:0,6,72	0/1:6,2:8:25.69:142,0,26	0/0:22,0:22:60.66:0,61,1965	0/0:2,0:2:6.02:0,6,216	0/0:32,0:32:4.88:0,5,533	0/0:7,0:7:18.05:0,18,567	0/0:3,0:3:9.02:0,9,244	0/0:3,0:3:9.03:0,9,298	0/0:4,0:4:12.03:0,12,349	0/0:7,0:7:21.07:0,21,747	0/0:3,0:3:9.02:0,9,188	0/0:4,0:4:2.92:0,3,17	0/1:2,2:4:11.20:104,0,11	0/0:31,0:31:93.22:0,93,2692	0/0:18,0:18:54.19:0,54,1756	0/1:16,0:16:12.94:13,0,409	0/0:6,0:6:14.82:0,15,169	0/1:3,0:3:15.96:16,0,107	1/1:1,0:1:2.92:17,3,0	0/0:2,0:2:6.02:0,6,192	0/0:1,0:1:2.99:0,3,24	0/0:18,0:18:54.19:0,54,1814	0/1:3,2:5:22.28:103,0,22	0/0:8,0:7:20.96:0,21,371	0/1:8,0:8:4.77:5,0,59
chr10	103659099	.	ATG	A	265.02	PASS	AB=0.953;AC=20;AF=0.476;AN=42;BaseQRankSum=5.477;DP=595;FS=0.000;HRun=0;HaplotypeScore=82.3237;InbreedingCoeff=0.3680;MQ=66.60;MQ0=21;MQRankSum=-0.332;QD=0.94;ReadPosRankSum=1.760;VQSLOD=1.2086;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:15.01:0,15,171	./.	./.	./.	1/1:11,0:12:2.84:14,3,0	0/0:21,0:20:12.46:0,12,114	1/1:36,0:38:2.78:13,3,0	./.	0/0:11,0:9:6.02:0,6,85	0/0:21,0:21:14.99:0,15,161	0/0:9,0:9:6:0,6,66	1/1:13,6:19:12.03:128,12,0	0/1:22,1:23:22.87:23,0,79	0/0:20,0:21:6:0,6,51	1/1:15,0:19:5.68:28,6,0	1/1:13,0:19:8.39:42,8,0	0/1:26,3:29:65.63:66,0,231	0/0:31,0:31:3.35:0,3,223	./.	0/0:13,0:13:0:0,0,0	1/1:51,0:49:2.84:14,3,0	1/1:15,0:17:2.84:14,3,0	./.	0/0:29,0:28:12.02:0,12,140	0/1:17,1:18:22.87:23,0,78	0/1:18,0:17:0:0,0,0	1/1:13,0:16:8.27:41,8,0	./.
chr10	103659673	.	CTG	C	3953.02	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.620;DP=664;FS=9.555;HRun=0;HaplotypeScore=102.8137;InbreedingCoeff=0.9998;MQ=89.59;MQ0=0;MQRankSum=-2.328;QD=37.29;ReadPosRankSum=1.698;VQSLOD=5.4936;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,178,3306	0/0:15,0:15:45.10:0,45,805	0/0:28,0:28:78.27:0,78,1412	0/0:21,0:21:57.15:0,57,1007	1/1:1,19:20:45.15:663,45,0	0/0:21,0:21:63.22:0,63,1180	0/0:27,0:27:81.26:0,81,1462	0/0:35,0:35:99:0,99,1851	0/0:21,0:21:60.19:0,60,1092	0/0:21,0:21:60.21:0,60,1112	0/0:15,0:15:45.13:0,45,809	0/0:27,0:27:78.26:0,78,1421	0/0:32,0:32:96.33:0,96,1778	0/0:26,0:26:75.26:0,75,1383	1/1:2,18:20:48.16:706,48,0	1/1:1,16:17:42.14:619,42,0	0/0:29,0:29:87.30:0,87,1619	0/0:16,0:16:48.12:0,48,856	0/0:28,0:28:75.26:0,75,1384	0/0:13,0:13:39.10:0,39,695	0/0:34,0:34:99:0,102,1902	1/1:0,19:19:51.17:751,51,0	0/0:11,0:11:30.10:0,30,546	0/0:36,0:36:99:0,108,2002	0/0:17,0:17:48.16:0,48,877	1/1:1,17:18:51.15:729,51,0	0/0:25,0:25:72.25:0,72,1340	1/1:1,11:12:33.11:486,33,0
chr10	103659716	.	CG	C	4827.71	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.148;DP=710;FS=1.570;HRun=3;HaplotypeScore=84.9758;InbreedingCoeff=0.9998;MQ=86.50;MQ0=0;MQRankSum=-1.455;QD=32.62;ReadPosRankSum=-0.482;VQSLOD=4.7825;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,166,2367	0/0:19,0:19:54.15:0,54,739	0/0:30,0:30:81.18:0,81,1087	0/0:16,0:16:40.92:0,41,516	0/0:24,0:24:69.23:0,69,980	0/0:26,0:26:75.24:0,75,1060	0/0:27,0:27:81.23:0,81,1139	1/1:2,21:23:60.11:711,60,0	0/0:23,0:23:66.22:0,66,936	0/0:21,0:21:63.20:0,63,888	0/0:20,0:20:54.17:0,54,759	0/0:22,0:22:63.20:0,63,888	0/0:29,0:29:84.26:0,84,1169	0/0:26,0:26:78.23:0,78,1063	0/0:18,0:18:51.13:0,51,708	0/0:16,0:16:45.15:0,45,648	0/0:33,0:33:99:0,99,1379	0/0:16,0:16:42.12:0,42,584	1/1:1,24:25:72.10:831,72,0	1/1:1,23:24:60.12:723,60,0	1/1:1,46:47:99:1560,126,0	0/0:19,0:19:54.17:0,54,758	0/0:20,0:20:60.16:0,60,835	0/0:39,0:39:99:0,117,1638	0/0:25,0:25:72.17:0,72,961	0/0:28,0:28:84.22:0,84,1137	1/1:0,29:29:81.25:1002,81,0	0/0:10,0:10:27.56:0,28,390
chr10	103659905	.	AC	A	3036.86	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.473;DP=622;FS=3.871;HRun=2;HaplotypeScore=66.1737;InbreedingCoeff=0.9919;MQ=82.15;MQ0=0;MQRankSum=-1.820;QD=34.12;ReadPosRankSum=3.250;VQSLOD=4.1842;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1572	0/0:13,0:13:36.11:0,36,519	0/0:22,0:22:48.28:0,48,672	0/0:15,2:17:11.40:0,11,449	1/1:0,17:17:44.93:558,45,0	0/0:20,0:20:57.19:0,57,853	0/0:28,0:28:84.27:0,84,1237	0/0:26,0:26:69.22:0,69,995	0/0:29,0:29:84.24:0,84,1198	0/0:22,0:22:66.22:0,66,988	0/0:15,0:15:39.12:0,39,564	0/0:26,0:26:78.26:0,78,1167	0/0:26,0:26:72.20:0,72,1015	0/0:20,0:20:57.19:0,57,853	1/1:0,18:18:54.18:701,54,0	1/1:0,13:13:39.13:506,39,0	0/0:38,0:38:99:0,111,1621	0/0:36,0:36:99:0,108,1594	0/0:23,0:23:63.18:0,63,920	0/0:17,0:17:51.17:0,51,754	0/0:42,0:42:99:0,120,1757	1/1:0,19:19:51.16:658,51,0	0/0:12,0:12:33.07:0,33,469	0/0:31,0:31:90.29:0,90,1314	0/0:15,0:15:45.15:0,45,673	1/1:1,14:15:42.12:530,42,0	0/0:19,0:19:57.18:0,57,833	1/1:0,7:7:21.07:273,21,0
chr10	103660444	.	TC	T	3631.93	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.717;DP=638;FS=4.311;HRun=2;HaplotypeScore=71.1347;InbreedingCoeff=0.9998;MQ=88.65;MQ0=0;MQRankSum=-0.730;QD=36.69;ReadPosRankSum=-1.994;VQSLOD=3.4842;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,1932	0/0:14,0:14:42.14:0,42,616	0/0:26,0:26:72.13:0,72,974	0/0:20,0:20:57.14:0,57,777	0/0:19,0:19:54.18:0,54,805	0/0:15,0:15:45.15:0,45,672	0/0:31,0:31:93.30:0,93,1373	1/1:0,20:20:60.17:750,60,0	0/0:22,0:22:66.21:0,66,969	0/0:22,0:22:66.21:0,66,967	0/0:14,0:14:42.13:0,42,608	0/0:26,0:26:78.25:0,78,1146	0/0:20,0:20:57.19:0,57,853	0/0:21,0:21:63.21:0,63,943	0/0:18,0:18:54.17:0,54,789	0/0:11,0:11:33.11:0,33,495	0/0:43,0:43:99:0,126,1869	0/0:32,0:32:90.30:0,90,1342	1/1:0,21:21:63.19:799,63,0	1/1:0,12:12:36.06:447,36,0	1/1:1,21:22:63.20:818,63,0	0/0:24,0:24:72.24:0,72,1060	0/0:17,0:17:51.16:0,51,741	0/0:31,0:31:90.29:0,90,1329	0/0:22,0:22:66.22:0,66,988	0/0:37,0:37:99:0,108,1600	1/1:0,24:24:63.20:818,63,0	0/0:11,0:11:33.11:0,33,495
chr10	103661651	.	GC	G	3528.22	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.039;DP=648;FS=4.525;HRun=1;HaplotypeScore=78.5329;InbreedingCoeff=0.9963;MQ=82.43;MQ0=0;MQRankSum=0.803;QD=37.94;ReadPosRankSum=2.528;VQSLOD=4.4004;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1559	0/0:9,0:9:27.09:0,27,430	0/0:18,0:18:54.17:0,54,802	0/0:19,0:18:51.05:0,51,670	1/1:1,10:11:30.09:406,30,0	0/0:14,0:14:42.14:0,42,665	0/0:27,0:27:81.28:0,81,1290	0/0:22,0:22:63.19:0,63,941	0/0:18,0:18:54.15:0,54,811	0/0:29,0:29:87.26:0,87,1362	0/0:17,0:17:51.17:0,51,815	0/0:27,0:27:78.22:0,78,1172	0/0:24,0:24:72.21:0,72,1103	0/0:24,0:24:72.23:0,72,1119	1/1:0,25:25:75.25:1048,75,0	1/1:0,15:15:36.07:480,36,0	0/0:46,0:46:99:0,138,2147	0/0:33,0:33:96.24:0,96,1479	0/0:29,0:29:84.13:0,84,1241	0/0:26,0:26:75.24:0,75,1174	0/0:57,0:57:99:0,162,2469	1/1:0,19:19:45.15:629,45,0	0/0:22,0:22:66.23:0,66,1053	0/0:38,0:38:99:0,114,1726	0/0:11,0:11:30.10:0,30,480	1/1:0,18:18:54.18:755,54,0	0/0:12,0:12:36.12:0,36,575	1/1:0,5:5:15.05:210,15,0
chr10	103663622	.	T	TGG	6887.40	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=13.291;DP=693;FS=13.993;HRun=6;HaplotypeScore=101.3680;InbreedingCoeff=0.9995;MQ=85.07;MQ0=0;MQRankSum=-1.734;QD=24.86;ReadPosRankSum=0.653;VQSLOD=2.7215;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,108,1317	0/0:11,0:11:27.08:0,27,329	0/0:15,0:15:32.60:0,33,313	0/0:30,0:30:56.85:0,57,652	1/1:3,22:26:60.20:980,60,0	0/0:23,0:23:63.18:0,63,757	0/0:30,0:30:84.23:0,84,1010	1/1:3,0:24:52.40:184,52,0	0/0:36,0:36:96.30:0,96,1171	0/0:24,0:24:63.19:0,63,768	0/0:12,0:12:30.09:0,30,366	0/0:28,0:28:69.20:0,69,842	0/0:28,0:28:78.23:0,78,938	0/0:26,0:26:75.24:0,75,915	1/1:2,24:26:66.23:1116,66,0	1/1:2,24:26:69.24:1167,69,0	0/0:34,0:34:96.27:0,96,1156	0/0:24,0:24:66.21:0,66,805	1/1:7,1:22:45.43:200,45,0	1/1:6,0:20:38.38:136,38,0	1/1:5,0:39:71.69:250,72,0	1/1:2,22:24:66.23:1111,66,0	0/0:12,0:12:33.10:0,33,403	0/0:21,0:20:54.16:0,54,658	0/0:21,0:21:54.17:0,54,659	1/1:4,22:26:32.62:1053,33,0	1/1:7,0:35:66.35:232,66,0	1/1:0,9:9:27.09:457,27,0
chr10	103663690	.	CG	C	2850.83	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.501;DP=633;FS=7.576;HRun=5;HaplotypeScore=75.3459;InbreedingCoeff=0.9882;MQ=87.34;MQ0=0;MQRankSum=-1.323;QD=25.01;ReadPosRankSum=-1.213;VQSLOD=2.2812;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,166,2236	0/0:4,0:4:12.04:0,12,164	0/0:19,0:19:48.08:0,48,605	0/0:25,0:26:14:0,14,696	0/0:22,0:22:63.20:0,63,845	0/0:22,0:22:63.21:0,63,860	0/0:27,0:27:78.24:0,78,1048	1/1:5,22:27:63.18:714,63,0	0/0:25,0:25:69.23:0,69,942	0/0:22,0:22:60.20:0,60,821	0/0:14,0:14:39.13:0,39,533	0/0:23,0:23:63.21:0,63,861	0/0:19,0:19:57.18:0,57,758	0/0:22,0:22:60.14:0,60,781	0/0:30,0:30:84.25:0,84,1103	0/0:27,0:27:75.24:0,75,1002	0/0:24,0:24:66.19:0,66,883	0/0:28,0:28:78.26:0,78,1066	1/1:3,16:19:47.35:517,47,0	1/1:1,17:18:39.11:441,39,0	1/1:5,25:30:74.86:820,75,0	0/0:22,0:22:60.19:0,60,803	0/0:16,0:16:45.15:0,45,615	0/0:26,0:26:78.26:0,78,1063	0/0:15,0:15:45.15:0,45,609	0/0:17,0:17:51.13:0,51,676	1/1:6,14:20:48.12:533,48,0	0/0:12,0:12:36.11:0,36,475
chr10	103667362	.	T	TCAAACAAA	8421.12	PASS	AB=0.675;AC=9;AF=0.167;AN=54;BaseQRankSum=-5.338;DP=871;FS=18.253;HRun=0;HaplotypeScore=239.7745;InbreedingCoeff=0.8559;MQ=64.75;MQ0=0;MQRankSum=-9.659;QD=46.27;ReadPosRankSum=-5.662;VQSLOD=2.3972;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:61:73.88:0,74,2164	0/0:10,0:10:24.03:0,24,451	0/0:32,0:27:14.61:0,15,168	0/0:35,0:33:21.07:0,21,445	1/1:20,11:33:36.05:855,36,0	0/0:19,0:19:39.12:0,39,886	0/0:34,0:34:54.16:0,54,1216	0/0:18,0:30:19.38:0,19,278	0/0:45,0:45:72.22:0,72,1669	0/0:38,0:38:51.17:0,51,1217	0/0:17,0:17:27.09:0,27,633	0/0:26,0:26:42.14:0,42,1007	0/0:27,0:27:51.14:0,51,1132	0/0:39,0:39:75.26:0,75,1860	1/1:18,23:43:57.20:2185,57,0	1/1:24,20:45:69.71:2687,70,0	0/0:34,0:34:67.46:0,67,1611	0/0:29,0:28:45.01:0,45,988	0/0:11,0:16:15.05:0,15,260	0/0:21,0:40:38.24:0,38,712	0/0:13,0:34:50.39:0,50,848	1/1:19,13:34:48.08:1224,48,0	0/0:26,0:26:27.07:0,27,583	0/0:47,0:47:83.51:0,84,1906	0/0:19,0:19:36.12:0,36,909	0/1:14,12:27:27.57:1471,0,28	0/0:12,0:31:57.18:0,57,954	./.
chr10	103671549	.	AGCC	A	4993.09	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.411;DP=615;FS=2.919;HRun=0;HaplotypeScore=94.2043;InbreedingCoeff=0.9965;MQ=76.35;MQ0=0;MQRankSum=-5.392;QD=38.12;ReadPosRankSum=1.374;VQSLOD=5.6391;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:99:0,111,2224	0/0:11,0:11:33.09:0,33,659	0/0:12,0:13:29.09:0,29,369	0/0:12,0:12:17.49:0,17,339	0/0:14,0:14:35.97:0,36,655	0/0:14,0:14:42.08:0,42,842	0/0:30,0:30:90.31:0,90,1974	1/1:0,26:26:75.24:1190,75,0	0/0:23,0:23:57.10:0,57,1148	0/0:16,0:16:45.13:0,45,904	0/0:9,0:9:20.99:0,21,373	0/0:23,0:23:66.18:0,66,1382	0/0:22,0:22:63.22:0,63,1401	0/0:29,0:29:87.23:0,87,1828	0/0:26,0:26:75.14:0,75,1531	0/0:13,0:13:39.09:0,39,798	0/0:35,0:35:99:0,99,2162	0/0:21,0:21:60.14:0,60,1251	1/1:3,19:22:57.16:876,57,0	1/1:0,18:18:51.17:822,51,0	1/1:4,38:42:75.26:1225,75,0	0/0:21,0:21:57.13:0,57,1177	0/0:18,0:18:45.06:0,45,908	0/0:39,0:39:99:0,114,2540	0/0:16,0:16:48.02:0,48,930	0/0:28,0:28:77.95:0,78,1512	1/1:3,20:23:54.18:881,54,0	0/0:11,0:11:30.10:0,30,670
chr10	103678045	.	A	ATGTGTG	3102.11	PASS	AB=0.692;AC=19;AF=0.352;AN=54;BaseQRankSum=-0.362;DP=1064;FS=1.707;HRun=0;HaplotypeScore=228.6382;InbreedingCoeff=0.6597;MQ=53.54;MQ0=36;MQRankSum=-3.702;QD=7.32;ReadPosRankSum=-2.613;VQSLOD=1.8110;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:61:63.57:0,64,1655	0/0:12,0:13:27.06:0,27,451	1/1:83,0:19:2.90:16,3,0	./.	1/1:21,4:25:14.16:246,14,0	0/0:23,0:25:39.59:0,40,719	0/0:41,0:46:57.12:0,57,994	0/1:22,0:33:19.68:116,0,20	0/0:42,0:43:71.75:0,72,1350	0/0:42,0:43:53.52:0,54,987	0/0:20,0:21:41.85:0,42,703	0/0:32,0:32:48.13:0,48,915	0/0:36,0:36:64.88:0,65,1096	0/0:44,0:45:68.66:0,69,1111	1/1:23,20:48:18.19:409,18,0	1/1:14,16:32:19.57:614,20,0	0/0:48,0:50:99:0,101,2018	0/0:37,0:37:69.18:0,69,1314	1/1:19,0:26:9.40:453,9,0	0/0:15,0:24:10.57:0,11,76	0/1:36,0:65:64.47:64,0,190	1/1:10,10:23:6.02:195,6,0	0/0:23,0:25:39.12:0,39,743	0/0:43,0:44:69.19:0,69,1596	0/0:21,0:20:24.08:0,24,494	1/1:22,15:40:45.07:1124,45,0	0/1:13,0:29:15.96:16,0,183	1/1:8,0:12:3.01:38,3,0
chr10	103678398	.	AACACACAC	A	1562.71	PASS	AB=0.936;AC=15;AF=0.300;AN=50;BaseQRankSum=3.397;DP=706;FS=4.300;HRun=0;HaplotypeScore=190.5127;InbreedingCoeff=0.3380;MQ=67.25;MQ0=15;MQRankSum=0.204;QD=6.51;ReadPosRankSum=0.082;VQSLOD=2.6214;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:64.83:0,65,1440	./.	./.	./.	1/1:13,1:14:2.69:199,3,0	0/0:21,0:21:20.45:0,20,451	0/0:37,0:36:33.28:0,33,591	0/0:22,0:21:3.56:0,4,13	0/0:33,0:33:46.01:0,46,927	0/0:29,0:29:38.60:0,39,675	0/0:14,0:13:13.02:0,13,379	0/0:28,0:31:35.88:0,36,674	0/0:15,0:16:30.49:0,30,686	0/0:24,0:24:30.05:0,30,784	1/1:20,15:38:6.59:286,7,0	1/1:13,12:24:5.79:88,6,0	0/0:17,0:18:22.86:0,23,529	0/0:17,0:17:33.55:0,34,817	0/1:18,0:17:9.85:10,0,18	0/1:11,1:13:99:163,0,144	0/1:54,0:54:62.10:138,0,62	1/1:12,15:27:5.61:198,6,0	0/0:19,0:19:24.54:0,25,591	0/0:31,0:33:54.11:0,54,1223	0/0:19,0:20:22.72:0,23,352	0/1:25,1:25:12.73:355,0,13	0/1:13,1:13:64.57:65,0,69	1/1:3,6:9:0.06:212,0,0
chr10	103679784	.	T	TGG	1765.35	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-0.933;DP=552;FS=1.717;HRun=8;HaplotypeScore=74.1524;InbreedingCoeff=0.9807;MQ=78.24;MQ0=1;MQRankSum=0.917;QD=18.58;ReadPosRankSum=-2.975;VQSLOD=1.5328;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.24:0,93,1033	0/0:10,0:10:30.08:0,30,329	0/0:25,0:21:19.39:0,19,405	0/0:22,0:21:45.18:0,45,413	0/0:24,0:24:66.18:0,66,734	0/0:16,0:16:36.09:0,36,401	0/0:20,0:21:44.82:0,45,479	1/1:8,15:25:49.41:570,49,0	0/0:28,0:28:69.16:0,69,759	0/0:32,0:33:74.83:0,75,789	0/0:16,0:16:42.11:0,42,467	0/0:24,0:24:57.13:0,57,625	0/0:23,0:23:60.14:0,60,669	0/0:12,0:12:27.07:0,27,301	0/0:21,0:21:57.02:0,57,616	0/0:19,0:19:39.08:0,39,434	0/0:36,0:36:87.15:0,87,1018	0/0:15,0:14:45.12:0,45,501	1/1:8,2:13:20.01:192,20,0	1/1:4,13:18:32.94:402,33,0	1/1:2,12:13:21.07:333,21,0	0/0:16,0:16:45.10:0,45,491	0/0:7,0:7:18.03:0,18,187	0/0:17,0:17:36.07:0,36,390	0/0:18,0:18:48.10:0,48,519	0/0:18,0:19:36.01:0,36,448	1/1:4,16:25:39.28:441,39,0	0/0:3,0:3:9.02:0,9,100
chr10	103679978	.	ACACACACACGCACACACACTCACACACACGCACACT	A	3420.59	PASS	AB=0.545;AC=11;AF=0.196;AN=56;BaseQRankSum=8.092;DP=867;FS=0.000;HRun=0;HaplotypeScore=587.7093;InbreedingCoeff=0.8381;MQ=53.13;MQ0=27;MQRankSum=-4.650;QD=30.01;ReadPosRankSum=1.080;VQSLOD=-0.3844;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,153,14635	0/0:12,0:12:24.04:0,24,1876	0/0:48,0:8:20.94:0,21,607	0/0:74,0:18:32.47:0,32,1509	0/1:4,20:24:0:0,0,0	0/0:22,0:22:57.20:0,57,6322	0/0:34,0:34:75.17:0,75,6808	0/0:34,0:33:74.91:0,75,4334	0/0:25,0:25:75.24:0,75,8204	0/0:29,0:29:66.23:0,66,6960	0/0:21,0:21:45.10:0,45,3960	0/0:28,0:28:72.20:0,72,7349	0/0:22,0:22:60.21:0,60,5866	0/0:29,0:29:75.26:0,75,8099	1/1:0,23:23:6.02:354,6,0	1/1:2,21:23:3.01:178,3,0	0/0:43,0:43:99:0,108,11360	0/0:32,0:31:90.29:0,90,8358	0/0:19,0:17:41.63:0,42,3591	0/0:14,0:13:24.08:0,24,2925	0/0:88,0:87:99:0,208,17338	1/1:2,13:15:3.01:176,3,0	0/0:23,0:23:57.20:0,57,6161	0/0:53,0:53:99:0,147,15081	0/0:23,0:23:57.14:0,57,5501	1/1:3,18:21:44.71:2032,45,0	0/0:24,0:24:60.20:0,60,5790	1/1:2,6:8:9.03:682,9,0
chr10	103680014	.	T	TCA	5438.34	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-8.735;DP=761;FS=2.780;HRun=0;HaplotypeScore=107.0071;InbreedingCoeff=0.7807;MQ=58.67;MQ0=7;MQRankSum=-0.737;QD=19.85;ReadPosRankSum=-4.238;VQSLOD=4.1427;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,120,1499	0/0:8,0:8:21.07:0,21,264	0/0:35,0:17:30.33:0,30,400	0/0:32,0:16:34.58:0,35,348	0/1:20,0:20:0:0,0,0	0/0:25,0:25:54.16:0,54,668	0/0:32,0:32:78.25:0,78,983	1/1:11,22:35:75.19:1141,75,0	0/0:32,0:32:59.73:0,60,997	0/0:34,0:34:90.29:0,90,1136	0/0:17,0:17:42:0,42,498	0/0:24,0:24:63.19:0,63,782	0/0:19,0:19:48.14:0,48,588	0/0:28,0:28:66.19:0,66,815	1/1:23,0:23:6.02:67,6,0	1/1:24,0:24:3.01:33,3,0	0/0:37,0:37:93.30:0,93,1172	0/0:28,0:28:55.22:0,55,868	1/1:9,17:28:56.63:870,57,0	1/1:5,15:18:24.08:399,24,0	1/1:10,46:57:82.56:1907,83,0	1/1:14,0:14:3.01:34,3,0	0/0:20,0:20:57.17:0,57,705	0/0:45,0:45:99:0,105,1324	0/0:22,0:22:51.16:0,51,643	0/1:22,0:22:25.84:153,0,26	1/1:3,18:21:48.16:798,48,0	0/1:8,0:8:0.24:37,0,0
chr10	103681501	.	A	ACAT	384.69	PASS	AB=0.667;AC=13;AF=0.271;AN=48;BaseQRankSum=7.124;DP=382;FS=1.970;HRun=0;HaplotypeScore=87.1528;InbreedingCoeff=0.7431;MQ=88.53;MQ0=0;MQRankSum=-4.995;QD=16.03;ReadPosRankSum=1.200;VQSLOD=3.5794;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1834	0/0:5,0:5:15.02:0,15,244	0/0:16,0:16:38.48:0,38,733	0/0:16,0:16:34.35:0,34,666	1/1:1,3:4:0.87:34,1,0	0/0:21,0:21:63.22:0,63,1174	0/0:37,0:37:99:0,108,1991	./.	0/0:18,0:18:51.17:0,51,951	0/0:23,0:23:69.23:0,69,1254	0/0:8,0:8:24.08:0,24,439	0/0:25,0:25:75.26:0,75,1398	0/0:24,0:24:72.25:0,72,1333	0/0:32,0:32:93.29:0,93,1654	1/1:2,4:5:12.04:200,12,0	1/1:3,1:4:5.83:72,6,0	0/0:23,0:23:66.21:0,66,1199	0/0:19,0:19:57.20:0,57,1062	./.	1/1:0,3:3:5.68:40,6,0	./.	1/1:0,3:3:9.02:106,9,0	0/0:11,0:11:30.10:0,30,549	0/0:28,0:28:84.27:0,84,1531	0/0:17,0:17:51.16:0,51,919	0/1:1,1:2:46.19:46,0,50	1/1:1,1:2:5.80:41,6,0	./.
chr10	103681502	.	G	GTGTGTTTGTGGGTGTATGTTGT	23162.05	PASS	AB=0.972;AC=22;AF=0.393;AN=56;BaseQRankSum=14.004;DP=497;FS=4.707;HRun=0;HaplotypeScore=305.4410;InbreedingCoeff=0.8313;MQ=79.14;MQ0=0;MQRankSum=-15.674;QD=149.43;ReadPosRankSum=-1.417;VQSLOD=3.8125;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,5218	0/0:6,0:6:15.05:0,15,678	0/0:16,0:16:45.14:0,45,1624	0/0:16,0:16:28.69:0,29,1612	1/1:15,3:18:31.31:872,31,0	0/0:22,0:22:63.22:0,63,3650	0/0:37,0:37:99:0,111,6012	1/1:8,0:8:21.07:1488,21,0	0/1:19,0:19:82.18:82,0,3063	0/0:23,0:23:69.24:0,69,3785	0/0:8,0:8:24.08:0,24,1316	0/0:25,0:25:75.26:0,75,4413	0/0:24,0:24:72.25:0,72,4096	0/0:33,0:33:96.30:0,96,5085	1/1:15,4:20:57.20:4650,57,0	1/1:21,1:22:66.21:4522,66,0	0/0:22,0:22:66.20:0,66,3670	0/0:19,0:19:57.20:0,57,3186	1/1:13,0:13:27.09:1771,27,0	1/1:6,3:9:24.08:1583,24,0	1/1:6,0:6:11.25:663,11,0	1/1:10,3:13:36.12:2222,36,0	0/0:11,0:11:33.10:0,33,1641	0/0:28,0:28:84.25:0,84,4785	0/0:17,0:17:48.16:0,48,2787	0/1:16,1:17:82.82:3656,0,83	1/1:5,1:6:18.06:1138,18,0	1/1:3,0:3:9.03:515,9,0
chr10	103684049	.	TG	T	2853.43	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.650;DP=552;FS=24.488;HRun=5;HaplotypeScore=73.8808;InbreedingCoeff=0.9886;MQ=87.88;MQ0=0;MQRankSum=-1.144;QD=27.70;ReadPosRankSum=-0.393;VQSLOD=1.7311;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.28:0,84,1148	0/0:4,0:4:12.04:0,12,164	0/0:18,0:18:39.12:0,39,486	0/0:25,0:25:62.80:0,63,828	1/1:0,12:12:15.04:170,15,0	0/0:16,0:16:45.14:0,45,599	0/0:26,0:26:69.22:0,69,928	0/0:24,0:24:66.21:0,66,889	0/0:25,0:25:75.25:0,75,1025	0/0:20,0:20:51.17:0,51,695	0/0:9,0:9:18.06:0,18,246	0/0:25,0:25:75.24:0,75,1010	0/0:18,0:18:54.18:0,54,738	0/0:25,0:25:75.24:0,75,1007	1/1:1,20:21:60.17:681,60,0	1/1:2,15:17:45.13:510,45,0	0/0:32,0:31:90.29:0,90,1217	0/0:15,0:15:45.14:0,45,600	0/0:15,0:15:42.14:0,42,563	0/0:18,0:18:30.10:0,30,409	0/0:30,0:30:84.27:0,84,1133	1/1:0,19:19:54.15:612,54,0	0/0:17,0:17:36.12:0,36,488	0/0:24,0:24:63.19:0,63,834	0/0:13,0:13:27.09:0,27,369	1/1:0,20:20:57.13:625,57,0	0/0:19,0:19:54.13:0,54,702	1/1:0,14:14:39.11:442,39,0
chr10	103684194	.	AGT	A	5246.11	PASS	AB=0.554;AC=21;AF=0.375;AN=56;BaseQRankSum=14.434;DP=899;FS=0.979;HRun=0;HaplotypeScore=181.6213;InbreedingCoeff=0.9472;MQ=59.09;MQ0=4;MQRankSum=-3.516;QD=14.78;ReadPosRankSum=3.256;VQSLOD=5.0171;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:60.18:0,60,964	0/0:19,0:19:42.14:0,42,697	0/0:33,0:24:50.94:0,51,708	0/0:35,0:32:39.23:0,39,921	1/1:8,22:28:51.16:640,51,0	0/0:33,0:33:69.21:0,69,1095	0/0:25,1:26:57.19:0,57,941	1/1:12,0:50:51.21:353,51,0	0/0:31,1:32:40.41:0,40,1198	0/0:51,0:51:99:0,121,1841	0/0:25,0:25:51.13:0,51,801	0/0:44,0:44:96.33:0,96,1569	0/0:43,0:43:99:0,108,1724	0/0:44,0:44:99:0,102,1637	1/1:4,29:33:66.21:832,66,0	1/1:5,18:23:27.09:341,27,0	0/0:25,0:25:61.95:0,62,985	0/0:22,0:22:35.44:0,35,826	1/1:7,0:22:7.52:126,8,0	1/1:3,0:35:71.02:349,71,0	1/1:5,0:36:61.72:305,62,0	1/1:5,25:29:45.14:564,45,0	0/0:19,0:19:42.14:0,42,691	0/0:30,2:31:37.38:0,37,1120	0/0:27,0:27:45.15:0,45,747	0/1:8,33:41:0.57:1049,0,1	1/1:4,0:16:19.89:98,20,0	1/1:7,28:35:32.41:589,32,0
chr10	103684337	.	TG	T	32.60	PASS	AB=0.973;AC=13;AF=0.232;AN=56;BaseQRankSum=9.530;DP=831;FS=93.243;HRun=1;HaplotypeScore=296.5310;InbreedingCoeff=-0.1814;MQ=41.83;MQ0=0;MQRankSum=-9.268;QD=0.09;ReadPosRankSum=-1.170;VQSLOD=-0.0424;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:2.07:0,2,119	0/0:12,2:14:7.78:0,8,248	0/0:26,1:18:12.68:0,13,608	0/0:19,0:10:30.09:0,30,434	0/1:25,0:24:1.75:2,0,125	0/1:35,0:35:10.77:11,0,182	0/0:24,0:24:25.63:0,26,393	0/0:33,0:29:78.60:0,79,1159	0/1:51,0:51:0.28:0,0,238	0/0:64,1:65:68.46:0,68,1538	1/1:18,1:19:2.10:20,2,0	0/1:46,0:46:17.69:18,0,176	0/1:41,0:41:17.96:18,0,294	0/0:40,0:40:0.12:0,0,368	0/1:38,0:36:8.27:8,0,145	0/1:30,0:27:0.94:1,0,86	0/0:16,0:16:6.01:0,6,239	0/0:15,0:15:20.80:0,21,242	0/0:27,0:26:65.39:0,65,872	0/0:22,1:21:2.07:0,2,210	0/0:39,0:39:40.79:0,41,685	0/0:29,3:30:1.70:0,2,152	0/1:14,2:16:26:26,0,39	0/0:25,0:24:2.65:0,3,245	0/1:10,2:12:1.94:2,0,128	0/0:44,1:44:32.24:0,32,1222	0/1:28,0:27:22.37:22,0,265	0/1:22,1:22:31.54:32,0,232
chr10	103685345	.	GGGGC	G	843.93	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.666;DP=267;FS=3.000;HRun=0;HaplotypeScore=51.9924;InbreedingCoeff=0.4812;MQ=75.07;MQ0=2;MQRankSum=-3.178;QD=9.93;ReadPosRankSum=-2.741;VQSLOD=1.8480;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:47.97:0,48,768	0/0:5,0:5:11.91:0,12,174	0/0:10,0:10:27.80:0,28,314	0/0:11,0:10:11.08:0,11,281	0/0:7,0:7:5.96:0,6,19	0/0:11,0:11:24.47:0,24,452	0/0:17,0:17:41.95:0,42,711	0/1:13,0:13:15.60:115,0,16	0/0:13,0:13:21.49:0,21,382	0/0:9,0:9:11.44:0,11,123	0/0:3,0:3:9.03:0,9,199	0/0:9,0:9:12.36:0,12,154	0/0:16,0:16:32.99:0,33,619	0/0:9,0:9:23.54:0,24,476	1/1:8,0:8:11.99:101,12,0	1/1:9,3:12:26.43:271,26,0	0/0:14,0:14:30.10:0,30,720	0/0:9,0:9:18.06:0,18,456	0/1:6,0:6:10.11:50,0,10	0/1:6,0:6:7.84:64,0,8	1/1:11,0:10:23.98:201,24,0	1/1:7,0:7:5.19:27,5,0	0/0:4,0:4:11.87:0,12,166	0/0:11,0:10:22.17:0,22,322	0/0:4,0:4:3.01:0,3,76	1/1:10,1:11:20.55:168,21,0	0/1:9,0:9:8.62:9,0,41	0/1:2,0:2:15.83:16,0,19
chr10	103685346	.	GGGC	G	1349.15	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-0.791;DP=268;FS=2.936;HRun=0;HaplotypeScore=46.1461;InbreedingCoeff=0.8402;MQ=75.05;MQ0=2;MQRankSum=-0.819;QD=14.66;ReadPosRankSum=-3.070;VQSLOD=2.7205;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:47.82:0,48,618	0/0:5,0:5:11.91:0,12,147	0/0:10,0:11:20.97:0,21,206	0/0:10,0:9:9.47:0,9,207	1/1:6,1:7:8.82:60,9,0	0/0:12,0:12:27.45:0,27,382	0/0:17,0:17:44.89:0,45,606	1/1:13,1:14:22.89:171,23,0	0/0:11,0:11:21.48:0,21,299	0/0:9,0:9:11.43:0,11,109	0/0:3,0:3:9.03:0,9,158	0/0:8,0:8:11.82:0,12,119	0/0:17,0:17:35.94:0,36,516	0/0:9,0:9:23.54:0,24,382	1/1:6,2:8:21.02:218,21,0	1/1:10,2:12:34.83:343,35,0	0/0:14,0:14:30.10:0,30,582	0/0:9,0:9:18.06:0,18,372	1/1:7,0:7:15.31:107,15,0	1/1:6,0:6:13.80:104,14,0	1/1:11,0:10:23.98:201,24,0	1/1:3,4:7:5.98:58,6,0	0/0:5,0:5:11.83:0,12,121	0/0:11,0:10:23.88:0,24,269	0/0:4,0:4:3.01:0,3,62	1/1:7,2:9:20.96:206,21,0	0/1:9,0:9:0.58:66,0,1	1/1:2,0:2:2.95:22,3,0
chr10	103685347	.	GGC	G	1218.50	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-0.664;DP=265;FS=3.881;HRun=0;HaplotypeScore=41.5560;InbreedingCoeff=0.8809;MQ=75.55;MQ0=2;MQRankSum=-0.332;QD=14.01;ReadPosRankSum=-2.849;VQSLOD=2.5493;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:47.75:0,48,492	0/0:5,0:5:12.38:0,12,120	0/0:10,0:10:17.33:0,17,168	0/0:11,0:10:10.78:0,11,172	1/1:7,0:7:7.07:39,7,0	0/0:13,0:13:30.21:0,30,299	0/0:16,0:16:44.20:0,44,488	1/1:10,2:12:23.90:193,24,0	0/0:11,0:11:20.83:0,21,225	0/0:11,0:11:17.41:0,17,146	0/0:3,0:3:9.03:0,9,119	0/0:8,0:8:11.68:0,12,105	0/0:17,0:17:35.52:0,36,385	0/0:9,0:9:23.43:0,23,276	1/1:8,0:8:22.21:177,22,0	1/1:11,1:12:34.68:259,35,0	0/0:13,0:13:30.09:0,30,446	0/0:9,0:9:18.06:0,18,289	1/1:7,0:7:15.34:107,15,0	1/1:6,0:6:13.80:104,14,0	1/1:10,0:9:23.97:201,24,0	1/1:7,0:7:5.87:36,6,0	0/0:5,0:5:11.77:0,12,89	0/0:12,0:11:26.86:0,27,252	0/0:4,0:4:3.01:0,3,49	1/1:6,1:7:20.88:156,21,0	1/1:8,1:9:15.85:136,16,0	1/1:2,0:2:2.98:22,3,0
chr10	103685348	.	GC	G	1145.15	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-0.447;DP=262;FS=6.389;HRun=1;HaplotypeScore=37.1337;InbreedingCoeff=0.8433;MQ=79.19;MQ0=2;MQRankSum=-2.608;QD=13.63;ReadPosRankSum=-1.009;VQSLOD=2.0050;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:50.41:0,50,406	0/0:5,0:5:11.87:0,12,94	0/0:12,0:12:23.90:0,24,194	0/0:9,1:10:1.14:0,1,103	1/1:7,0:7:4.26:33,4,0	0/0:14,0:14:29.31:0,29,252	0/0:15,1:16:21.86:0,22,357	1/1:12,0:12:23.90:193,24,0	0/0:11,0:11:12.92:0,13,130	0/0:12,0:12:21.53:0,22,156	0/0:3,0:3:8.79:0,9,65	0/0:7,0:7:11.61:0,12,86	0/0:16,0:16:35.51:0,36,279	0/0:9,0:9:23.37:0,23,210	1/1:8,0:8:19.24:159,19,0	1/1:12,0:12:34.18:224,34,0	0/0:13,0:13:29.85:0,30,312	0/0:9,0:9:18.06:0,18,217	1/1:0,6:6:15.34:107,15,0	1/1:5,0:5:13.80:104,14,0	1/1:10,0:9:23.98:201,24,0	1/1:5,0:6:5.56:30,6,0	0/0:5,0:5:11.71:0,12,70	0/0:12,0:11:26.79:0,27,206	0/0:2,0:2:3.01:0,3,37	1/1:7,0:7:20.64:139,21,0	1/1:9,0:9:17.92:141,18,0	1/1:2,0:2:2.98:22,3,0
chr10	103685787	.	TA	T	974.26	PASS	AB=0.747;AC=10;AF=0.179;AN=56;BaseQRankSum=6.767;DP=579;FS=0.915;HRun=13;HaplotypeScore=75.0257;InbreedingCoeff=0.4845;MQ=79.78;MQ0=4;MQRankSum=0.741;QD=7.11;ReadPosRankSum=-2.247;VQSLOD=2.2026;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,3:50:70.17:0,70,974	0/0:7,1:8:7.52:0,8,186	0/0:29,2:21:1.36:0,1,168	0/0:27,0:20:2.63:0,3,140	0/0:25,0:25:39.22:0,39,508	0/0:15,0:17:32.56:0,33,276	0/0:17,1:20:31.83:0,32,437	0/1:10,13:24:7.48:200,0,7	0/1:20,3:24:9.06:9,0,397	0/1:17,2:19:2.02:2,0,287	0/0:13,0:15:38.73:0,39,345	0/0:18,1:20:35.02:0,35,489	0/0:17,0:19:43.31:0,43,347	0/0:18,0:19:39.71:0,40,349	0/0:19,0:20:26.71:0,27,401	0/0:23,0:24:30.26:0,30,412	0/0:22,2:26:24.73:0,25,491	0/0:22,0:24:45.50:0,46,440	1/1:8,10:18:31.75:219,32,0	0/1:6,12:19:17.63:204,0,18	1/1:1,16:17:41.52:297,42,0	0/0:17,0:17:22.35:0,22,323	0/0:17,1:18:22.89:0,23,344	0/0:13,0:13:35.93:0,36,323	0/0:12,0:13:32.55:0,33,283	0/0:17,1:19:32.35:0,32,331	1/1:3,12:15:9.68:195,10,0	0/0:14,1:15:14.25:0,14,299
chr10	103687317	.	A	AC	6001.26	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-13.270;DP=557;FS=2.078;HRun=5;HaplotypeScore=52.2711;InbreedingCoeff=0.9842;MQ=86.57;MQ0=0;MQRankSum=-1.118;QD=34.10;ReadPosRankSum=-0.493;VQSLOD=4.9376;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1073	0/0:4,0:4:12.02:0,12,123	0/0:17,0:17:44.67:0,45,445	0/0:19,0:19:47.46:0,47,480	1/1:0,8:8:24.08:315,24,0	0/0:14,0:14:39.10:0,39,419	0/0:24,0:24:63.15:0,63,671	1/1:0,20:20:60.17:761,60,0	0/0:25,0:25:72.13:0,72,749	0/0:27,0:27:78.11:0,78,823	0/0:7,0:7:15.04:0,15,161	0/0:28,0:28:75.18:0,75,799	0/0:16,0:16:45.11:0,45,483	0/0:20,0:20:45.11:0,45,484	1/1:2,16:18:45.15:587,45,0	1/1:0,14:14:36.12:474,36,0	0/0:30,0:30:81.20:0,81,870	0/0:44,0:43:99:0,123,1288	1/1:4,12:16:33.11:434,33,0	1/1:0,9:9:24.08:315,24,0	1/1:3,40:43:99:1458,111,0	1/1:0,11:11:30.10:395,30,0	0/0:15,0:15:42.10:0,42,447	0/0:43,0:43:99:0,108,1151	0/0:13,0:13:36.09:0,36,387	1/1:1,16:17:48.16:631,48,0	1/1:2,14:16:38.96:513,39,0	1/1:0,4:4:9.03:118,9,0
chr10	103689402	.	CT	C	2866.86	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=9.442;DP=520;FS=0.000;HRun=1;HaplotypeScore=55.2366;InbreedingCoeff=0.9004;MQ=72.10;MQ0=0;MQRankSum=-0.731;QD=28.38;ReadPosRankSum=0.676;VQSLOD=3.2749;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,1545	0/0:5,0:5:15.03:0,15,202	0/1:10,0:10:2.97:3,0,320	0/0:12,0:12:5.13:0,5,226	1/1:1,11:12:24.07:320,24,0	0/0:12,0:12:35.95:0,36,425	0/0:23,0:23:66.14:0,66,883	0/0:23,0:23:56.99:0,57,732	0/0:13,0:13:39.08:0,39,519	0/0:18,0:18:54.04:0,54,709	0/0:9,0:9:21.07:0,21,309	0/0:25,0:25:75.24:0,75,1101	0/0:23,0:23:69.16:0,69,964	0/0:19,0:19:54.12:0,54,762	1/1:0,16:16:48.16:663,48,0	1/1:1,11:12:33.11:458,33,0	0/0:36,0:36:99:0,105,1550	0/0:32,0:32:93.21:0,93,1285	0/0:12,0:12:36.12:0,36,539	0/0:8,0:8:15.01:0,15,197	0/0:40,0:40:99:0,108,1571	1/1:9,8:17:35.13:432,35,0	0/0:14,0:14:36.11:0,36,514	0/0:26,0:26:78.25:0,78,1144	0/0:9,0:9:27.05:0,27,359	1/1:0,27:27:79.83:928,80,0	0/0:19,0:19:57.16:0,57,809	1/1:0,7:7:18.06:250,18,0
chr10	103691073	.	TTC	T	376.18	PASS	AB=0.935;AC=19;AF=0.352;AN=54;BaseQRankSum=4.132;DP=627;FS=6.876;HRun=0;HaplotypeScore=98.3757;InbreedingCoeff=-0.0285;MQ=63.08;MQ0=16;MQRankSum=1.689;QD=1.14;ReadPosRankSum=2.171;VQSLOD=1.1618;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:36:45.82:0,46,435	0/0:7,0:6:12.04:0,12,181	0/0:24,0:11:0:0,0,0	./.	1/1:23,0:23:5.94:41,6,0	0/1:19,0:20:8.91:9,0,334	0/1:29,0:28:2.61:3,0,302	0/0:28,0:27:6.36:0,6,29	0/1:25,2:28:47.26:47,0,481	0/0:33,0:34:15.95:0,16,325	0/1:16,0:18:57.34:67,0,57	0/0:18,0:17:32.24:0,32,422	0/1:23,2:24:34.32:34,0,291	0/1:16,2:17:45.98:46,0,151	1/1:12,0:12:2.97:21,3,0	1/1:18,0:18:5.72:58,6,0	0/0:24,0:24:4.98:0,5,569	0/0:17,0:17:29.97:0,30,385	0/0:17,0:15:8.91:0,9,75	0/0:15,0:15:5.91:0,6,53	0/0:20,0:19:8.98:0,9,74	0/1:20,0:20:4.94:5,0,122	0/1:16,2:18:17.91:18,0,164	0/1:25,4:30:99:108,0,700	0/1:30,1:32:42.77:43,0,495	0/1:17,0:16:8.42:8,0,57	0/0:20,0:19:4.09:0,4,10	1/1:22,0:22:2.98:21,3,0
chr10	103691167	.	G	GGGTGTGTGT	1435.96	PASS	AB=0.772;AC=8;AF=0.143;AN=56;BaseQRankSum=7.401;DP=684;FS=0.663;HRun=0;HaplotypeScore=208.4937;InbreedingCoeff=0.0357;MQ=64.45;MQ0=20;MQRankSum=-6.152;QD=9.84;ReadPosRankSum=-3.112;VQSLOD=1.8389;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:36:99:0,99,2136	0/0:4,0:4:12.04:0,12,252	0/0:50,0:21:59.86:0,60,735	0/0:48,0:30:80.04:0,80,1099	0/0:8,0:11:1.81:0,2,67	0/0:10,0:14:42.14:0,42,1017	0/0:23,0:28:77.15:0,77,1748	0/1:21,0:24:99:490,0,446	0/0:20,0:23:69.22:0,69,1642	0/0:25,0:25:69.22:0,69,1228	0/0:12,0:13:36.12:0,36,778	0/0:28,0:31:93.31:0,93,2311	0/0:27,0:29:84.28:0,84,1806	0/0:25,0:26:48.26:0,48,1698	0/1:14,0:23:32.26:32,0,233	0/1:9,0:24:99:311,0,156	0/0:27,0:32:82.91:0,83,2196	0/0:20,0:24:72.24:0,72,1851	0/1:15,0:20:99:181,0,458	1/1:6,0:11:5.54:26,6,0	0/0:17,1:25:7.68:0,8,109	0/0:11,0:16:9.03:0,9,110	0/0:19,0:21:60.19:0,60,1339	0/0:34,0:37:96.21:0,96,2496	0/0:25,0:26:75.25:0,75,1821	0/1:20,0:34:99:512,0,646	0/0:8,0:15:11.58:0,12,147	0/1:8,0:9:17.58:18,0,196
chr10	103693452	.	TTCAC	T	5060.11	PASS	AB=0.906;AC=20;AF=0.357;AN=56;BaseQRankSum=18.177;DP=769;FS=2.674;HRun=0;HaplotypeScore=194.8764;InbreedingCoeff=0.7786;MQ=66.99;MQ0=0;MQRankSum=-0.936;QD=15.02;ReadPosRankSum=1.036;VQSLOD=4.8113;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,135,3120	0/0:14,0:14:33.07:0,33,679	0/0:21,0:19:26.78:0,27,703	0/0:17,0:16:29.82:0,30,605	1/1:22,5:27:24.75:431,25,0	0/0:14,0:14:39.12:0,39,906	0/0:24,0:24:63.17:0,63,1421	1/1:29,8:37:26.86:844,27,0	0/0:32,0:32:81.25:0,81,1877	0/0:22,0:22:63.21:0,63,1480	0/0:18,0:18:42.13:0,42,963	0/0:34,0:34:87.26:0,87,2026	0/0:26,0:26:66.21:0,66,1599	0/0:32,0:32:84.25:0,84,1907	1/1:41,4:45:56.35:606,56,0	0/1:35,2:37:46.32:272,0,46	0/0:25,0:25:63.17:0,63,1459	0/0:30,0:30:84.25:0,84,1958	1/1:18,5:23:55.86:569,56,0	1/1:26,1:27:4.89:269,5,0	1/1:36,2:38:55.66:430,56,0	1/1:22,6:28:54:629,54,0	0/0:30,0:30:81.22:0,81,1868	0/0:22,0:22:66.15:0,66,1361	0/0:19,0:19:54.18:0,54,1311	1/1:34,6:40:10.78:688,11,0	0/1:16,3:19:36.40:207,0,36	1/1:15,1:16:0.65:116,1,0
chr10	103693835	.	G	GGGGA	767.21	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=4.151;DP=551;FS=3.829;HRun=0;HaplotypeScore=93.8106;InbreedingCoeff=0.1075;MQ=87.14;MQ0=0;MQRankSum=-1.936;QD=5.99;ReadPosRankSum=-3.022;VQSLOD=1.4268;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,122,1893	0/0:17,0:17:48.12:0,48,809	0/0:16,0:16:42.03:0,42,683	0/0:27,0:27:68.83:0,69,943	0/1:7,0:7:14.98:15,0,34	0/0:22,0:22:63.20:0,63,1136	0/0:27,0:27:81.21:0,81,1318	0/1:9,0:9:31.69:32,0,129	0/0:19,0:19:57.16:0,57,982	0/0:21,0:21:63.19:0,63,1083	0/0:20,0:20:60.16:0,60,1020	0/0:28,0:28:81.24:0,81,1409	0/0:18,0:18:54.16:0,54,937	0/0:23,0:23:60.20:0,60,1078	1/1:0,14:16:21.07:504,21,0	0/1:14,0:14:45.58:139,0,46	0/0:38,0:38:99:0,111,1825	0/0:22,0:22:66.16:0,66,1086	0/1:16,0:16:39.66:40,0,187	0/1:11,0:11:50.90:67,0,51	0/1:26,0:26:8.47:8,0,159	0/0:14,0:14:8.12:0,8,65	0/0:9,0:9:27.09:0,27,491	0/0:33,0:33:99:0,99,1616	0/0:28,0:28:81.19:0,81,1329	0/1:18,0:18:46.34:46,0,95	0/1:9,0:9:6.26:6,0,99	1/1:2,0:2:3.01:63,3,0
chr10	103695656	.	CTG	C	4659.12	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.974;DP=610;FS=0.393;HRun=0;HaplotypeScore=73.2467;InbreedingCoeff=0.9885;MQ=84.64;MQ0=1;MQRankSum=-2.272;QD=36.98;ReadPosRankSum=-0.856;VQSLOD=6.6334;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1898	0/0:5,0:5:15.05:0,15,277	0/0:14,0:14:36.10:0,36,576	0/0:23,0:23:66.16:0,66,1132	0/0:12,0:12:36.11:0,36,642	0/0:17,0:17:42.14:0,42,787	0/0:47,0:47:99:0,141,2563	1/1:1,27:28:72.23:1040,72,0	0/0:18,0:18:54.19:0,54,1009	0/0:16,0:16:42.14:0,42,787	0/0:10,0:10:30.07:0,30,498	0/0:30,0:30:90.29:0,90,1643	0/0:17,0:17:45.15:0,45,842	0/0:22,0:22:66.23:0,66,1205	0/0:26,0:26:75.24:0,75,1372	0/0:21,0:20:60.19:0,60,1078	0/0:45,0:45:99:0,132,2417	0/0:36,0:36:99:0,102,1827	1/1:2,14:16:42.14:615,42,0	1/1:1,10:11:24.08:353,24,0	1/1:3,49:51:99:1988,135,0	0/0:15,0:15:42.14:0,42,775	0/0:14,0:14:42.14:0,42,787	0/0:21,0:21:63.22:0,63,1170	0/0:17,0:17:45.15:0,45,823	0/0:17,0:17:48.16:0,48,899	1/1:1,18:19:45.15:663,45,0	0/0:6,0:6:12.04:0,12,199
chr10	103695848	.	ATC	A	902.41	PASS	AB=0.939;AC=28;AF=0.500;AN=56;BaseQRankSum=5.759;DP=574;FS=8.258;HRun=0;HaplotypeScore=96.9728;InbreedingCoeff=-0.0891;MQ=74.68;MQ0=3;MQRankSum=-1.290;QD=1.95;ReadPosRankSum=2.549;VQSLOD=1.0431;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:49,2:51:78.18:78,0,733	0/0:12,0:12:11.99:0,12,118	0/0:27,0:20:0:0,0,0	0/1:38,0:21:0:0,0,0	1/1:10,2:12:9.54:60,10,0	0/0:11,0:11:9.03:0,9,135	0/1:35,1:36:32.52:33,0,295	0/1:28,0:28:6.85:7,0,14	0/1:20,0:21:8.11:8,0,224	0/1:23,0:25:14.44:14,0,361	0/1:16,0:16:17.74:18,0,81	0/1:17,2:19:38.77:39,0,280	0/0:12,0:12:12:0,12,120	0/1:10,1:11:47.65:48,0,117	1/1:6,9:15:15.04:165,15,0	0/1:19,2:21:50.95:51,0,159	0/1:19,1:20:12.27:12,0,305	0/0:29,0:28:32.10:0,32,457	0/1:15,0:17:1.55:20,0,2	1/1:16,0:21:24.59:112,25,0	1/1:18,0:21:5.60:28,6,0	1/1:8,4:14:3.61:190,4,0	0/1:8,0:8:5.04:5,0,243	0/1:21,1:24:13.07:13,0,430	0/0:21,0:21:21.04:0,21,275	0/1:13,1:15:26.31:36,0,26	1/1:9,0:15:16.80:80,17,0	0/1:10,3:13:5.97:51,0,6
chr10	103695906	.	TTG	T	1121.93	PASS	AB=0.630;AC=9;AF=0.161;AN=56;BaseQRankSum=4.271;DP=650;FS=29.689;HRun=0;HaplotypeScore=144.5748;InbreedingCoeff=0.8528;MQ=67.06;MQ0=7;MQRankSum=-4.486;QD=16.26;ReadPosRankSum=-2.601;VQSLOD=1.6468;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,107,1651	0/0:8,0:8:23.76:0,24,334	0/0:57,0:36:74.65:0,75,1186	0/0:77,0:39:74.73:0,75,1119	0/0:17,1:18:15.50:0,16,213	0/0:21,0:21:45.14:0,45,730	0/0:28,0:28:78.22:0,78,1236	1/1:5,12:17:36.11:454,36,0	0/0:16,0:16:39.11:0,39,631	0/0:25,0:25:36.24:0,36,913	0/0:15,0:15:36.10:0,36,553	0/0:17,0:17:51.08:0,51,801	0/0:16,0:16:45.13:0,45,735	0/0:19,0:19:48.11:0,48,770	0/0:15,0:15:18.04:0,18,259	0/0:15,0:15:12.51:0,13,148	0/0:32,0:32:86.64:0,87,1363	0/0:27,0:27:62.84:0,63,986	1/1:0,11:11:33.07:398,33,0	1/1:6,8:14:5.99:60,6,0	1/1:4,6:10:8.98:117,9,0	0/0:21,0:21:14.13:0,14,318	0/0:16,0:16:20.29:0,20,422	0/0:36,0:36:77.83:0,78,1322	0/0:19,0:19:57.18:0,57,935	0/0:28,0:28:78.09:0,78,1229	0/1:7,10:17:2.99:247,0,3	0/0:11,0:11:30.10:0,30,492
chr10	103695922	.	C	CTGTG	1192.91	PASS	AB=0.875;AC=10;AF=0.179;AN=56;BaseQRankSum=4.900;DP=684;FS=11.582;HRun=0;HaplotypeScore=168.3668;InbreedingCoeff=0.5718;MQ=62.55;MQ0=14;MQRankSum=-8.340;QD=10.56;ReadPosRankSum=-3.614;VQSLOD=1.8771;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,105,1750	0/0:8,0:8:15.05:0,15,263	0/0:68,0:35:35.40:0,35,693	0/0:86,0:34:52.37:0,52,814	0/1:17,0:17:21.31:21,0,108	0/0:19,0:19:45.15:0,45,770	0/0:29,0:29:32.40:0,32,1085	1/1:10,6:16:36.09:702,36,0	0/0:17,0:17:42.11:0,42,695	0/0:23,0:22:54.17:0,54,911	0/0:16,0:16:27.56:0,28,467	0/0:20,0:20:48.15:0,48,815	0/0:21,0:20:57.19:0,57,993	0/0:20,0:20:39.13:0,39,679	0/0:15,0:15:8.89:0,9,69	1/1:13,0:13:3.54:13,4,0	0/0:31,0:31:84.22:0,84,1368	0/0:26,0:26:56.47:0,56,895	1/1:12,3:14:15.05:334,15,0	0/1:8,3:11:0:0,0,0	0/0:8,4:12:2.65:0,3,51	0/1:21,0:21:5.38:5,0,47	0/0:16,0:16:32.97:0,33,490	0/0:35,0:34:83.46:0,83,1407	0/0:21,0:21:48.16:0,48,841	0/0:32,0:32:19.64:0,20,753	0/1:11,8:19:1.95:260,0,2	0/0:13,0:13:12.24:0,12,227
chr10	103695941	.	T	TGCGTGC	2384.07	PASS	AB=0.770;AC=12;AF=0.214;AN=56;BaseQRankSum=-0.586;DP=637;FS=13.050;HRun=0;HaplotypeScore=154.7013;InbreedingCoeff=0.6131;MQ=51.42;MQ0=20;MQRankSum=-0.753;QD=17.93;ReadPosRankSum=-0.807;VQSLOD=2.3335;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:52:99:0,120,2023	0/0:7,0:7:18.06:0,18,363	0/0:40,0:13:29.23:0,29,529	0/0:58,0:12:33.04:0,33,468	1/1:6,10:19:5.89:130,6,0	0/0:21,0:21:48.63:0,49,887	0/0:32,0:32:75.12:0,75,1282	0/0:22,0:20:31.01:0,31,299	0/0:15,0:15:37.68:0,38,664	0/0:19,0:18:47.99:0,48,837	0/0:15,0:15:27.08:0,27,422	0/0:21,0:20:48.07:0,48,720	0/0:22,0:21:60.10:0,60,883	0/0:17,0:17:35.93:0,36,644	1/1:1,12:15:6.91:163,7,0	1/1:2,10:15:11.87:392,12,0	0/0:32,0:32:65.21:0,65,1650	0/0:23,0:22:38.33:0,38,946	0/0:16,0:13:25.49:0,25,187	0/1:7,0:6:0:0,0,0	0/0:20,0:17:2.31:0,2,20	0/1:2,0:20:4.42:299,0,4	0/0:14,0:14:23.97:0,24,453	0/0:39,0:37:83.90:0,84,1509	0/0:18,0:18:39.12:0,39,738	0/1:6,19:31:6.82:1205,0,7	0/1:18,0:17:55.09:55,0,148	1/1:8,0:8:21.06:297,21,0
chr10	103695943	.	T	TGC	179.39	PASS	AB=0.942;AC=8;AF=0.148;AN=54;BaseQRankSum=6.829;DP=623;FS=4.679;HRun=0;HaplotypeScore=117.6993;InbreedingCoeff=0.3415;MQ=51.16;MQ0=19;MQRankSum=-0.224;QD=1.78;ReadPosRankSum=2.351;VQSLOD=2.1779;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:51:97.17:0,97,1282	0/0:7,0:7:17.95:0,18,181	0/0:40,0:14:35.96:0,36,334	0/0:57,0:10:23.97:0,24,217	0/1:15,2:17:54.08:54,0,72	0/0:21,0:21:48.51:0,49,565	0/0:31,0:31:68.75:0,69,730	0/0:21,0:19:36.22:0,36,264	0/0:16,0:16:22.34:0,22,403	0/0:19,0:18:50.49:0,50,474	0/0:15,0:15:27.01:0,27,284	0/0:19,0:18:44.97:0,45,432	0/0:21,0:20:50.91:0,51,543	0/0:18,0:18:44.15:0,44,393	1/1:15,0:15:8.23:67,8,0	1/1:13,1:14:8.41:64,8,0	0/0:32,0:32:80.33:0,80,988	0/0:23,0:22:56.91:0,57,596	0/0:15,0:12:33.76:0,34,208	./.	0/0:19,0:16:5.86:0,6,43	0/1:18,3:21:32.67:46,0,33	0/0:14,0:14:23.99:0,24,256	0/0:41,0:39:84.34:0,84,898	0/0:17,0:17:38.97:0,39,420	0/1:26,0:26:70.07:70,0,111	0/0:17,0:16:20.62:0,21,144	0/1:8,0:8:14.08:14,0,66
chr10	103696496	.	A	AC	514.64	PASS	AB=0.804;AC=7;AF=0.125;AN=56;BaseQRankSum=7.794;DP=501;FS=12.678;HRun=0;HaplotypeScore=69.7618;InbreedingCoeff=0.1799;MQ=67.56;MQ0=20;MQRankSum=1.391;QD=4.29;ReadPosRankSum=-0.578;VQSLOD=1.8865;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:88.10:0,88,724	0/0:7,0:7:21.02:0,21,210	0/0:61,0:19:22.98:0,23,188	0/1:36,0:13:1.22:1,0,57	0/0:18,0:17:38.21:0,38,232	0/0:12,0:12:32.89:0,33,272	0/0:21,0:20:53.16:0,53,414	0/1:21,1:22:11.56:224,0,12	0/0:8,0:8:20.89:0,21,178	0/0:23,0:22:65.52:0,66,595	0/0:15,0:15:38.20:0,38,327	0/0:11,0:11:26.39:0,26,199	0/0:17,0:17:44.60:0,45,390	0/0:14,0:13:26.51:0,27,205	0/0:10,0:10:26.93:0,27,158	0/0:11,0:11:20.76:0,21,141	0/0:29,0:29:81.04:0,81,650	0/0:20,0:19:49.33:0,49,396	0/1:11,1:12:30.25:125,0,30	1/1:16,1:17:7.51:109,8,0	0/1:2,5:10:19.82:20,0,31	0/0:6,0:5:10.67:0,11,51	0/0:7,0:7:14.43:0,14,115	0/0:16,0:16:37.58:0,38,306	0/0:13,0:13:35.86:0,36,294	0/0:23,0:22:61.69:0,62,412	0/1:8,14:22:24.47:159,0,24	0/0:7,0:7:20.90:0,21,163
chr10	103696501	.	A	AC	812.20	PASS	AB=0.986;AC=10;AF=0.179;AN=56;BaseQRankSum=8.903;DP=505;FS=8.980;HRun=0;HaplotypeScore=72.6021;InbreedingCoeff=0.6896;MQ=70.33;MQ0=18;MQRankSum=-0.430;QD=6.83;ReadPosRankSum=-1.058;VQSLOD=2.1605;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:86.31:0,86,680	0/0:8,0:8:23.97:0,24,210	0/0:58,0:20:9.97:0,10,143	0/1:34,0:15:5.15:5,0,62	0/0:19,0:18:28.65:0,29,211	0/0:13,0:13:38.85:0,39,318	0/0:22,0:21:59.05:0,59,452	1/1:4,20:24:11.76:340,12,0	0/0:8,0:8:20.88:0,21,173	0/0:24,0:23:59.32:0,59,511	0/0:16,0:16:40.41:0,40,325	0/0:13,0:13:29.48:0,29,222	0/0:18,0:18:44.45:0,44,363	0/0:15,0:14:32.40:0,32,240	0/0:11,0:11:31.54:0,32,185	0/0:7,0:7:18.57:0,19,114	0/0:30,0:30:81.92:0,82,638	0/0:21,0:20:49.38:0,49,380	1/1:13,0:13:22.81:231,23,0	1/1:17,0:17:17.06:175,17,0	1/1:8,0:8:2.64:30,3,0	0/0:8,0:7:13.61:0,14,75	0/0:6,0:6:14.46:0,14,117	0/0:16,0:16:37.56:0,38,300	0/0:13,0:13:35.82:0,36,284	0/0:23,0:22:55.63:0,56,335	0/1:22,0:22:31.41:185,0,31	0/0:4,0:4:11.66:0,12,69
chr10	103697723	.	CTCCTGGCT	C	3622.66	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.414;DP=501;FS=1.179;HRun=0;HaplotypeScore=125.7938;InbreedingCoeff=0.9416;MQ=81.41;MQ0=0;MQRankSum=-7.641;QD=48.30;ReadPosRankSum=-0.590;VQSLOD=3.5189;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,4243	0/0:3,0:3:9.03:0,9,381	0/0:13,0:13:38.16:0,38,1374	0/0:16,0:16:36.06:0,36,1265	0/0:16,0:16:39.13:0,39,1680	0/0:23,0:23:69.24:0,69,2967	0/0:20,0:20:54.17:0,54,2059	1/1:5,14:19:42.13:925,42,0	0/0:16,0:16:45.15:0,45,1875	0/0:28,0:28:78.26:0,78,3075	0/0:7,0:7:21.07:0,21,807	0/0:28,0:28:81.28:0,81,3357	0/0:12,0:12:30.10:0,30,1254	0/0:12,0:12:36.12:0,36,1402	0/0:15,0:15:45.15:0,45,1859	0/0:19,0:19:54.19:0,54,2351	0/0:45,0:45:99:0,126,4998	0/0:38,0:38:99:0,114,4758	1/1:4,11:15:33.10:788,33,0	1/1:3,10:13:21.07:582,21,0	1/1:4,5:9:3.01:82,3,0	0/0:16,0:16:45.15:0,45,1783	0/0:10,0:10:30.10:0,30,1193	0/0:18,0:18:54.19:0,54,2314	0/0:11,0:11:33.11:0,33,1426	0/0:17,0:17:48.16:0,48,1979	1/1:1,18:19:44.94:1246,45,0	0/0:7,0:7:21.07:0,21,850
chr10	103698500	.	TC	T	5869.34	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=10.921;DP=612;FS=4.503;HRun=5;HaplotypeScore=62.1489;InbreedingCoeff=0.9803;MQ=82.68;MQ0=1;MQRankSum=-1.591;QD=28.63;ReadPosRankSum=-0.577;VQSLOD=4.7974;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1526	0/0:5,0:5:9.03:0,9,123	0/0:18,0:18:10.61:0,11,430	0/0:16,0:16:42.14:0,42,555	1/1:0,16:16:39.11:442,39,0	0/0:33,0:33:96.32:0,96,1311	0/0:32,0:32:93.29:0,93,1249	1/1:2,21:23:57.16:645,57,0	0/0:20,0:20:57.19:0,57,779	0/0:18,0:18:51.15:0,51,669	0/0:11,0:11:30.10:0,30,410	0/0:35,0:35:96.32:0,96,1307	0/0:22,0:22:63.18:0,63,839	0/0:31,0:31:84.25:0,84,1115	1/1:3,21:24:63.18:715,63,0	1/1:0,18:18:45.13:511,45,0	0/0:30,0:30:87.29:0,87,1189	0/0:36,0:36:99:0,99,1334	1/1:3,17:20:51.12:566,51,0	1/1:2,4:6:12.03:135,12,0	1/1:2,37:38:93.26:1055,93,0	1/1:0,10:10:23.99:272,24,0	0/0:9,0:9:24.06:0,24,309	0/0:28,0:28:78.26:0,78,1067	0/0:23,0:23:63.16:0,63,786	1/1:2,26:28:78.22:883,78,0	1/1:0,12:12:33.09:374,33,0	1/1:0,9:9:24.07:272,24,0
chr10	103702112	.	T	TAGA	15572.32	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-13.712;DP=606;FS=1.351;HRun=0;HaplotypeScore=78.6789;InbreedingCoeff=0.9965;MQ=88.76;MQ0=0;MQRankSum=-8.538;QD=60.36;ReadPosRankSum=-0.071;VQSLOD=6.5477;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,2248	0/0:10,0:10:30.10:0,30,505	0/0:22,0:22:60.19:0,60,972	0/0:25,0:25:62.96:0,63,956	1/1:2,24:26:63.22:1448,63,0	0/0:14,0:14:42.14:0,42,716	0/0:14,0:14:42.14:0,42,716	1/1:5,21:26:72.25:1654,72,0	0/0:27,0:27:78.27:0,78,1330	0/0:25,0:25:69.24:0,69,1177	0/0:20,0:20:57.20:0,57,972	0/0:20,0:20:54.17:0,54,895	0/0:14,0:14:42.14:0,42,716	0/0:17,0:17:51.17:0,51,870	1/1:2,15:17:42.14:968,42,0	1/1:2,20:23:57.20:1312,57,0	0/0:28,0:28:81.28:0,81,1373	0/0:28,0:28:81.28:0,81,1374	1/1:4,22:27:81.26:1784,81,0	1/1:3,24:28:75.22:1656,75,0	1/1:0,31:32:78.27:1786,78,0	1/1:0,20:20:60.21:1381,60,0	0/0:14,0:14:42.14:0,42,711	0/0:16,0:16:48.12:0,48,787	0/0:8,0:8:21.07:0,21,358	1/1:4,19:25:21.05:1434,21,0	1/1:3,26:29:81.23:1805,81,0	1/1:0,5:5:15.05:346,15,0
chr10	103702422	.	A	AAC	3862.83	PASS	AB=0.738;AC=20;AF=0.357;AN=56;BaseQRankSum=-3.534;DP=692;FS=4.580;HRun=0;HaplotypeScore=116.0488;InbreedingCoeff=0.5923;MQ=61.31;MQ0=6;MQRankSum=0.846;QD=12.83;ReadPosRankSum=-2.189;VQSLOD=2.8873;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:40:53.98:0,54,598	0/0:5,0:5:9.02:0,9,103	0/0:33,0:19:5.19:0,5,93	0/0:32,0:21:14.82:0,15,144	0/1:15,11:25:26.91:486,0,27	0/0:20,0:21:50.82:0,51,510	0/0:31,0:34:59.67:0,60,628	1/1:37,0:37:32.08:244,32,0	0/0:16,0:17:32.91:0,33,348	0/0:26,0:29:36.07:0,36,345	0/0:11,0:12:26.91:0,27,289	0/0:24,0:24:41.93:0,42,452	0/0:25,0:27:50.95:0,51,553	0/0:28,0:28:44.55:0,45,491	0/1:14,24:39:37:817,0,37	1/1:7,17:26:45.15:698,45,0	0/0:27,0:28:63.01:0,63,704	0/1:17,1:19:7.60:8,0,331	1/1:16,0:18:17.92:162,18,0	1/1:9,0:22:35.37:264,35,0	1/1:42,0:50:2.44:7,2,0	1/1:7,18:26:42.14:651,42,0	0/0:13,0:14:32.92:0,33,359	0/0:29,0:32:35.84:0,36,580	0/0:14,0:15:38.92:0,39,416	0/1:11,9:20:99:289,0,136	1/1:7,0:10:8.80:65,9,0	1/1:2,4:7:0.90:172,1,0
chr10	103703070	.	T	TAAA	4969.39	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=3.791;DP=580;FS=0.835;HRun=13;HaplotypeScore=142.8950;InbreedingCoeff=0.9436;MQ=70.98;MQ0=6;MQRankSum=-5.678;QD=24.36;ReadPosRankSum=-7.910;VQSLOD=0.5078;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:37:50.17:0,50,841	0/0:10,0:10:23.05:0,23,223	0/0:46,0:21:12.06:0,12,138	0/0:25,0:11:11.05:0,11,87	1/1:5,4:17:30.74:322,31,0	0/0:23,0:23:47.57:0,48,483	0/0:14,0:14:32.96:0,33,354	1/1:18,0:24:52.40:659,52,0	0/0:17,0:17:41.94:0,42,435	0/0:18,0:20:38.87:0,39,402	0/0:11,0:13:15.01:0,15,169	0/0:13,0:15:17.25:0,17,218	0/0:13,0:13:26.80:0,27,281	0/0:21,0:21:41.87:0,42,447	1/1:9,6:17:11.99:173,12,0	1/1:5,9:17:39:512,39,0	0/0:23,0:26:56.76:0,57,579	0/0:35,0:35:86.91:0,87,921	1/1:19,2:26:35.39:599,35,0	1/1:7,2:15:22.68:345,23,0	1/1:10,3:13:20.93:254,21,0	1/1:3,9:12:21.90:309,22,0	0/0:17,0:20:40.10:0,40,418	0/0:22,0:22:56.54:0,57,556	0/0:17,0:18:25.23:0,25,288	1/1:9,20:34:84.20:1229,84,0	1/1:8,2:18:24.08:368,24,0	1/1:4,1:11:0.46:199,0,0
chr10	103703469	.	CTGTGTG	C	395.78	PASS	AB=0.619;AC=13;AF=0.295;AN=44;BaseQRankSum=0.033;DP=335;FS=2.321;HRun=0;HaplotypeScore=70.2501;InbreedingCoeff=0.5719;MQ=67.19;MQ0=12;MQRankSum=-1.314;QD=5.91;ReadPosRankSum=-1.570;VQSLOD=1.6473;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:24:36.09:0,36,827	0/0:3,0:3:6.02:0,6,168	./.	./.	1/1:8,0:7:3:25,3,0	0/0:4,0:4:4.26:0,4,102	0/0:16,0:16:21.06:0,21,539	1/1:8,4:12:11.74:161,12,0	0/0:10,0:11:18.05:0,18,441	0/0:11,0:11:27.08:0,27,703	0/0:4,0:4:3.01:0,3,98	0/0:6,0:8:8.62:0,9,203	0/0:7,0:7:9.03:0,9,264	0/0:5,0:6:12.04:0,12,282	1/1:9,1:10:2.97:20,3,0	./.	0/0:18,0:22:36.10:0,36,981	0/0:8,0:10:18.05:0,18,360	1/1:6,0:6:5.97:47,6,0	./.	./.	./.	0/0:11,0:13:15.05:0,15,431	0/0:12,0:13:12.02:0,12,253	0/0:8,0:9:9.02:0,9,160	0/1:5,7:13:53.88:192,0,54	1/1:1,4:7:0.89:2,1,0	1/1:11,0:11:6.02:86,6,0
chr10	103704305	.	TAGACACACACAC	T	1126.19	PASS	AB=0.543;AC=11;AF=0.196;AN=56;BaseQRankSum=1.577;DP=479;FS=6.131;HRun=0;HaplotypeScore=144.7014;InbreedingCoeff=0.7683;MQ=68.77;MQ0=5;MQRankSum=-1.165;QD=14.08;ReadPosRankSum=-0.429;VQSLOD=2.1501;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:63.02:0,63,1710	0/0:7,0:7:20.95:0,21,410	0/0:20,0:15:31.02:0,31,335	0/0:32,0:18:25.63:0,26,279	1/1:11,0:11:29.56:339,30,0	0/0:15,0:15:35.99:0,36,547	0/0:21,0:21:62.99:0,63,1134	0/0:17,0:17:43.71:0,44,371	0/0:25,0:25:75.03:0,75,2245	0/0:18,0:18:54:0,54,849	0/0:8,0:7:20.96:0,21,298	0/0:18,0:18:50.08:0,50,1006	0/0:9,0:9:24.40:0,24,459	0/0:21,0:21:56.12:0,56,1156	1/1:0,11:11:6.02:228,6,0	0/1:3,16:19:99:108,0,174	0/0:30,0:30:72.88:0,73,1704	0/0:11,0:11:29.30:0,29,493	0/0:13,0:13:35.70:0,36,485	0/0:12,0:11:23.99:0,24,220	0/0:39,0:38:95.85:0,96,932	1/1:0,17:17:3.48:65,3,0	0/0:7,0:7:20.99:0,21,272	0/0:23,0:23:62.99:0,63,1457	0/0:7,0:6:11.96:0,12,233	1/1:16,0:16:44.94:478,45,0	0/0:19,0:19:50.86:0,51,604	1/1:0,5:5:3.01:66,3,0
chr10	103704307	.	GACAC	G	226.90	PASS	AB=0.961;AC=18;AF=0.375;AN=48;BaseQRankSum=4.185;DP=516;FS=7.125;HRun=0;HaplotypeScore=88.8478;InbreedingCoeff=0.2483;MQ=66.74;MQ0=6;MQRankSum=-1.078;QD=1.16;ReadPosRankSum=1.033;VQSLOD=1.0634;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:24.08:0,24,406	0/0:8,0:8:0:0,0,0	./.	./.	1/1:13,0:13:0.34:0,0,0	0/0:18,0:18:9.03:0,9,165	0/0:20,0:20:8.82:0,9,152	0/0:17,0:16:1.25:0,1,3	0/0:29,0:28:36.09:0,36,570	./.	0/0:8,0:7:3.01:0,3,69	0/0:21,0:21:6.01:0,6,67	0/0:12,0:12:6:0,6,61	0/1:21,0:21:24.83:25,0,203	1/1:12,0:12:6.01:56,6,0	0/1:20,0:20:21.84:22,0,64	0/1:30,4:34:80.43:80,0,304	0/1:10,1:11:32.79:63,0,33	1/1:14,0:14:3:27,3,0	1/1:11,0:12:3:28,3,0	./.	0/1:17,0:17:0:0,0,0	0/0:11,0:11:6.02:0,6,89	0/0:25,0:26:23.81:0,24,407	0/0:10,0:9:6.02:0,6,107	1/1:18,0:17:3:28,3,0	1/1:16,0:17:3:28,3,0	0/1:5,0:5:0:0,0,0
chr10	103706712	.	T	TG	3075.01	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-8.008;DP=598;FS=23.578;HRun=7;HaplotypeScore=65.1731;InbreedingCoeff=0.9910;MQ=75.08;MQ0=1;MQRankSum=-1.142;QD=24.80;ReadPosRankSum=2.359;VQSLOD=2.1252;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.13:0,87,838	0/0:10,0:10:30.05:0,30,289	0/0:19,0:19:16.18:0,16,293	0/0:20,0:19:16.34:0,16,349	1/1:1,14:15:36.11:435,36,0	0/0:11,0:11:30.05:0,30,290	0/0:30,0:30:78.11:0,78,753	0/0:24,0:24:60.07:0,60,574	0/0:21,0:21:51.07:0,51,492	0/0:23,0:23:51.08:0,51,492	0/0:6,0:6:18.03:0,18,174	0/0:30,0:30:84.13:0,84,810	0/0:20,0:20:54.08:0,54,520	0/0:21,0:21:54.08:0,54,521	1/1:2,26:28:60.14:706,60,0	1/1:3,24:27:63.19:761,63,0	0/0:25,0:25:69.03:0,69,654	0/0:28,0:28:72.11:0,72,695	0/0:14,0:14:36.06:0,36,348	0/0:10,0:10:18.02:0,18,168	0/0:60,0:61:99:0,147,1406	1/1:5,19:24:51.16:614,51,0	0/0:14,0:14:30.04:0,30,289	0/0:20,0:20:57.04:0,57,540	0/0:15,0:15:42.06:0,42,405	1/1:8,13:20:39.10:458,39,0	0/0:21,0:21:50.89:0,51,483	1/1:1,8:9:24.07:290,24,0
chr10	103709492	.	ATTT	A	2340.92	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=7.737;DP=386;FS=2.287;HRun=13;HaplotypeScore=59.1782;InbreedingCoeff=0.8984;MQ=68.91;MQ0=0;MQRankSum=-3.548;QD=22.95;ReadPosRankSum=1.653;VQSLOD=2.5213;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:18:51.15:0,51,946	0/0:5,0:5:12.04:0,12,231	0/1:14,0:9:4.13:4,0,252	0/0:17,0:11:21.01:0,21,309	0/0:23,0:23:57.20:0,57,1086	0/0:17,0:18:45.13:0,45,811	0/0:11,0:12:33.07:0,33,548	1/1:6,20:26:57.11:693,57,0	0/0:14,0:15:39.11:0,39,715	0/0:17,0:18:51.16:0,51,908	0/0:13,0:15:36.10:0,36,631	0/0:7,0:7:18.06:0,18,346	0/0:7,0:8:24.08:0,24,435	0/0:9,0:9:24.08:0,24,448	0/0:9,0:9:27.09:0,27,479	0/0:7,0:7:21.05:0,21,370	0/0:19,0:20:51.11:0,51,907	0/0:16,0:16:42.14:0,42,761	1/1:4,14:18:42.03:479,42,0	1/1:1,12:15:42.05:485,42,0	1/1:1,9:10:24.07:289,24,0	0/0:7,0:7:15.05:0,15,288	0/0:9,0:9:24.08:0,24,448	0/0:6,0:6:15.05:0,15,288	0/0:14,0:14:39.11:0,39,715	0/0:19,0:19:48.16:0,48,891	1/1:1,18:19:48.10:567,48,0	0/0:10,0:12:33.11:0,33,577
chr10	103709978	.	CA	C	4118.03	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.571;DP=615;FS=0.805;HRun=2;HaplotypeScore=58.2130;InbreedingCoeff=0.9998;MQ=91.92;MQ0=0;MQRankSum=-3.586;QD=36.12;ReadPosRankSum=-2.156;VQSLOD=3.1966;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.22:0,66,989	0/0:11,0:11:33.11:0,33,492	0/0:21,0:21:60.15:0,60,842	0/0:31,0:31:84.22:0,84,1126	0/0:33,0:33:93.30:0,93,1372	0/0:30,0:30:90.30:0,90,1346	0/0:16,0:16:48.16:0,48,720	1/1:1,30:31:90.28:1155,90,0	0/0:23,0:23:69.23:0,69,1033	0/0:32,0:32:96.32:0,96,1421	0/0:26,0:26:75.25:0,75,1123	0/0:17,0:17:51.17:0,51,765	0/0:16,0:16:48.16:0,48,718	0/0:20,0:20:60.18:0,60,860	0/0:13,0:13:39.13:0,39,584	0/0:19,0:19:57.19:0,57,854	0/0:28,0:28:81.27:0,81,1214	0/0:12,0:12:33.11:0,33,494	1/1:1,20:21:61.44:783,61,0	1/1:0,26:26:72.23:934,72,0	1/1:0,23:23:63.20:818,63,0	0/0:26,0:26:72.24:0,72,1072	0/0:19,0:19:57.19:0,57,854	0/0:20,0:20:57.18:0,57,834	0/0:21,0:21:60.17:0,60,856	0/0:32,0:32:93.31:0,93,1370	1/1:2,11:13:33.11:428,33,0	0/0:12,0:12:36.12:0,36,540
chr10	103711307	.	T	TG	2269.98	PASS	AB=0.942;AC=12;AF=0.214;AN=56;BaseQRankSum=16.316;DP=675;FS=0.714;HRun=0;HaplotypeScore=141.2307;InbreedingCoeff=-0.0634;MQ=77.37;MQ0=0;MQRankSum=-16.340;QD=9.19;ReadPosRankSum=-2.198;VQSLOD=3.5290;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,1901	0/0:15,0:15:45.15:0,45,629	0/0:22,0:22:58.02:0,58,703	0/0:21,0:18:45.13:0,45,590	0/1:23,0:23:99:146,0,336	0/0:23,0:23:66.20:0,66,892	0/0:28,0:28:84.26:0,84,1155	0/1:24,3:26:45.97:401,0,46	0/0:30,0:30:87.27:0,87,1193	0/0:27,0:27:81.27:0,81,1133	0/0:16,0:16:45.10:0,45,582	0/0:32,0:32:90.23:0,90,1201	0/0:38,0:38:99:0,108,1494	0/0:17,0:17:51.14:0,51,677	1/1:20,4:24:11.55:258,12,0	0/1:32,0:31:58.29:344,0,58	0/0:23,0:23:69.19:0,69,928	0/0:18,0:18:54.18:0,54,754	0/1:18,2:20:99:271,0,114	0/1:19,3:22:84.73:229,0,85	0/1:17,8:25:70.56:98,0,71	0/1:33,1:34:99:242,0,251	0/0:17,0:17:51.15:0,51,693	0/0:32,0:32:96.25:0,96,1286	0/0:21,0:21:63.18:0,63,844	0/1:21,0:21:26.57:254,0,27	0/1:17,0:17:83.95:176,0,84	0/1:2,0:2:6.18:6,0,32
chr10	103711309	.	A	ACTTGC	11487.66	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.829;DP=658;FS=4.437;HRun=0;HaplotypeScore=155.7926;InbreedingCoeff=0.9270;MQ=80.14;MQ0=0;MQRankSum=-16.346;QD=51.28;ReadPosRankSum=-3.389;VQSLOD=4.3602;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,3055	0/0:17,0:17:48.16:0,48,1065	0/0:23,0:23:61.90:0,62,1125	0/0:23,0:20:57.17:0,57,1151	1/1:7,16:23:1.29:769,1,0	0/0:22,0:22:66.23:0,66,1474	0/0:29,0:29:84.29:0,84,1881	1/1:12,14:25:51.01:1411,51,0	0/0:31,0:31:93.29:0,93,2006	0/0:29,0:29:87.27:0,87,1867	0/0:16,0:16:45.15:0,45,998	0/0:30,0:30:90.31:0,90,1924	0/0:38,0:38:99:0,114,2524	0/0:16,0:16:45.14:0,45,1003	1/1:8,12:20:23.62:1042,24,0	1/1:10,19:28:52.26:1616,52,0	0/0:23,0:23:69.22:0,69,1518	0/0:19,0:19:54.17:0,54,1215	1/1:6,10:16:28.77:1043,29,0	1/1:6,13:19:39.87:1057,40,0	1/1:16,7:23:6.23:496,6,0	1/1:11,21:32:36.51:1626,37,0	0/0:17,0:17:51.17:0,51,1142	0/0:32,0:32:96.33:0,96,2152	0/0:22,0:22:63.20:0,63,1383	1/1:8,12:20:37.80:1288,38,0	1/1:2,13:15:38.21:1060,38,0	1/1:0,1:1:3.01:81,3,0
chr10	103711310	.	A	AG	2931.14	PASS	AB=0.657;AC=19;AF=0.339;AN=56;BaseQRankSum=14.908;DP=657;FS=3.777;HRun=1;HaplotypeScore=125.5745;InbreedingCoeff=0.7537;MQ=80.14;MQ0=0;MQRankSum=-15.569;QD=13.26;ReadPosRankSum=0.060;VQSLOD=2.7252;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,1709	0/0:17,0:17:51.12:0,51,629	0/0:22,0:22:55.06:0,55,689	0/0:24,0:21:57.14:0,57,705	0/1:8,16:24:99:153,0,121	0/0:22,0:22:66.20:0,66,842	0/0:29,0:29:87.27:0,87,1115	1/1:11,13:23:54.21:461,54,0	0/0:31,0:31:90.28:0,90,1143	0/0:29,0:29:84.26:0,84,1061	0/0:16,0:16:48.14:0,48,609	0/0:30,0:30:90.28:0,90,1153	0/0:39,0:39:99:0,114,1468	0/0:15,0:15:45.14:0,45,571	1/1:8,12:20:38.30:302,38,0	1/1:10,19:28:37.01:452,37,0	0/0:24,0:24:66.20:0,66,843	0/0:20,0:20:54.14:0,54,683	1/1:6,10:16:34.73:313,35,0	1/1:5,13:18:21.38:284,21,0	0/1:16,7:23:4.58:88,0,5	0/1:11,21:32:65.81:341,0,66	0/0:17,0:17:51.17:0,51,662	0/0:32,0:32:96.29:0,96,1230	0/0:22,0:22:63.19:0,63,805	1/1:7,12:19:50.37:424,50,0	1/1:2,13:15:26.54:291,27,0	1/1:0,1:1:3:26,3,0
chr10	103711551	.	T	TAC	16285.09	PASS	AB=0.571;AC=21;AF=0.375;AN=56;BaseQRankSum=-21.577;DP=1190;FS=1.075;HRun=0;HaplotypeScore=146.5633;InbreedingCoeff=0.9226;MQ=59.86;MQ0=16;MQRankSum=-0.586;QD=35.56;ReadPosRankSum=0.491;VQSLOD=6.5264;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:72,0:72:99:0,159,2020	0/0:18,0:18:42.11:0,42,530	0/0:57,0:33:59.95:0,60,733	0/0:83,0:45:78.52:0,79,1029	1/1:1,33:34:62.92:1070,63,0	0/0:24,0:24:69.22:0,69,896	0/0:43,0:43:99:0,103,1351	1/1:12,39:51:99:1811,117,0	0/0:69,0:69:99:0,184,2334	0/0:41,0:41:99:0,108,1391	0/0:20,0:20:48.14:0,48,609	0/0:51,0:51:99:0,138,1792	0/0:46,0:46:99:0,123,1568	0/0:45,0:45:99:0,126,1568	1/1:0,40:41:96.33:1632,96,0	1/1:3,29:32:72.25:1225,72,0	0/0:48,0:48:99:0,126,1604	0/0:18,0:18:48.11:0,48,600	1/1:4,17:20:48.13:764,48,0	1/1:0,23:23:54.18:918,54,0	1/1:15,144:160:99:6225,368,0	1/1:4,30:36:51.17:868,51,0	0/0:26,0:26:69.21:0,69,883	0/0:46,0:46:99:0,114,1465	0/0:23,0:23:63.19:0,63,806	0/1:7,21:27:57.23:803,0,57	1/1:0,19:19:39.13:663,39,0	1/1:2,10:10:18.06:306,18,0
chr10	103712472	.	T	TATGCATTTATACA	36693.14	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=0.355;DP=739;FS=6.674;HRun=0;HaplotypeScore=265.4775;InbreedingCoeff=0.9997;MQ=80.70;MQ0=0;MQRankSum=-19.877;QD=141.67;ReadPosRankSum=-1.661;VQSLOD=3.8350;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,4332	0/0:9,0:9:27.07:0,27,908	0/0:29,0:29:75.04:0,75,2377	0/0:21,0:20:51.62:0,52,1470	1/1:10,19:31:66.23:3453,66,0	0/0:21,0:21:63.22:0,63,2445	0/0:45,0:45:99:0,126,4327	1/1:23,2:28:72.23:3414,72,0	0/0:39,0:39:99:0,117,4355	0/0:30,0:30:84.28:0,84,3071	0/0:19,0:19:57.20:0,57,2163	0/0:38,0:38:99:0,108,4191	0/0:35,0:35:99:0,105,3976	0/0:33,0:33:99:0,99,3875	1/1:11,19:30:90.31:5443,90,0	1/1:11,16:26:75.26:4680,75,0	0/0:35,0:35:99:0,105,3990	0/0:18,0:18:54.19:0,54,2055	1/1:13,6:23:60.12:2884,60,0	1/1:9,15:25:69.19:3887,69,0	1/1:14,3:20:33.11:1536,33,0	1/1:7,9:17:42.14:2422,42,0	0/0:15,0:15:39.13:0,39,1488	0/0:33,0:33:99:0,99,3499	0/0:17,0:17:45.14:0,45,1459	1/1:12,13:26:66.18:3726,66,0	1/1:10,9:22:60.21:3577,60,0	1/1:5,4:10:27.09:1672,27,0
chr10	103712518	.	AAGGAAGGG	A	3846.47	PASS	AB=0.918;AC=17;AF=0.304;AN=56;BaseQRankSum=8.609;DP=610;FS=8.897;HRun=0;HaplotypeScore=177.3452;InbreedingCoeff=0.5780;MQ=57.00;MQ0=12;MQRankSum=-11.966;QD=19.93;ReadPosRankSum=-1.799;VQSLOD=1.9398;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,123,3295	0/0:7,0:7:21.04:0,21,500	0/0:12,0:5:12.01:0,12,115	0/0:21,0:16:29.89:0,30,292	1/1:20,7:26:56.34:623,56,0	0/0:21,0:21:60.11:0,60,1397	0/0:39,0:39:99:0,104,1861	1/1:19,0:15:30.43:263,30,0	0/0:30,0:30:84.11:0,84,1633	0/0:28,0:26:72.14:0,72,1874	0/0:14,0:14:39.08:0,39,1168	0/0:28,0:28:78.16:0,78,2253	0/0:26,0:26:66.12:0,66,1485	0/0:19,0:19:54.11:0,54,1342	1/1:20,6:25:56.71:828,57,0	1/1:13,4:16:41.75:588,42,0	0/0:29,0:29:81.04:0,81,1684	0/0:21,0:21:52.14:0,52,1240	0/1:15,0:15:99:104,0,230	0/1:14,0:14:66.04:66,0,526	0/1:27,0:26:17.69:18,0,781	0/1:3,7:10:12.86:358,0,13	0/0:20,0:20:53.44:0,53,1440	0/0:37,0:36:98.58:0,99,2389	0/0:18,0:17:51.13:0,51,1383	1/1:13,4:15:35.87:608,36,0	0/1:14,0:13:62.78:63,0,498	1/1:6,1:7:20.96:329,21,0
chr10	103712662	.	C	CTTTTTTTT	4629.56	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=3.495;DP=506;FS=0.000;HRun=9;HaplotypeScore=136.4984;InbreedingCoeff=0.9563;MQ=77.47;MQ0=0;MQRankSum=-8.693;QD=30.06;ReadPosRankSum=-7.705;VQSLOD=-0.6202;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:90.15:0,90,1882	0/0:4,0:4:12.04:0,12,220	0/0:20,0:21:13.78:0,14,719	0/0:18,0:15:26.78:0,27,523	1/1:13,0:17:24.81:516,25,0	0/0:22,0:22:47.90:0,48,1038	0/0:21,0:22:57.05:0,57,1168	1/1:18,4:24:21.05:611,21,0	0/0:24,0:24:47.80:0,48,1071	0/0:18,0:18:48.04:0,48,1039	0/0:13,0:13:26.89:0,27,601	0/0:20,0:21:51.03:0,51,1056	0/0:23,0:23:60.06:0,60,1275	0/0:22,0:22:51.04:0,51,1113	1/1:7,1:14:15.05:467,15,0	1/1:7,1:13:15.05:501,15,0	0/0:25,0:25:75.26:0,75,1652	0/0:23,0:23:50.75:0,51,970	1/1:13,3:16:15.05:507,15,0	1/1:12,0:11:23.28:566,23,0	1/1:8,0:8:6.02:99,6,0	1/1:8,0:13:16.48:293,16,0	0/0:10,0:10:23.95:0,24,493	0/0:27,0:30:78.10:0,78,1570	0/0:22,0:22:56.76:0,57,1179	1/1:8,0:16:26.30:562,26,0	1/1:3,4:8:9.03:372,9,0	1/1:12,0:12:14.97:135,15,0
chr10	103714167	.	CGGGGGGGGGGGGGG	C	16737.13	PASS	AB=1.000;AC=23;AF=0.426;AN=54;BaseQRankSum=5.738;DP=333;FS=5.396;HRun=19;HaplotypeScore=159.1909;InbreedingCoeff=0.7751;MQ=60.45;MQ0=6;MQRankSum=-6.268;QD=71.22;ReadPosRankSum=8.221;VQSLOD=1.2396;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:0:0,0,0	0/0:2,0:2:0:0,0,0	0/0:26,0:9:21.07:0,21,512	0/0:13,0:6:6.02:0,6,166	1/1:4,28:32:78.04:2288,78,0	0/0:2,0:2:3.01:0,3,76	0/0:12,0:12:21.43:0,21,338	1/1:12,14:26:35.07:1065,35,0	0/0:7,0:8:18.06:0,18,1126	./.	0/1:2,0:2:0:0,0,0	0/0:7,0:6:15.05:0,15,886	0/0:1,0:1:3.01:0,3,186	0/0:4,0:4:9.03:0,9,520	1/1:7,17:24:45.03:1626,45,0	1/1:2,21:23:51.14:1846,51,0	0/0:7,0:7:9.01:0,9,372	0/0:5,0:5:9.03:0,9,431	1/1:1,13:14:39.02:1088,39,0	1/1:4,16:20:45.37:1455,45,0	1/1:3,5:8:9.01:327,9,0	1/1:3,22:25:59.90:1994,60,0	0/0:1,0:1:0:0,0,0	0/0:2,0:2:6.02:0,6,227	0/0:4,0:4:9.02:0,9,245	1/1:1,17:18:51.02:1682,51,0	1/1:5,29:34:78.12:2715,78,0	1/1:0,9:9:18.06:653,18,0
chr10	103714767	.	CAGAGAGAGACAGACTG	C	1983.39	PASS	AB=0.848;AC=13;AF=0.232;AN=56;BaseQRankSum=8.990;DP=826;FS=6.956;HRun=0;HaplotypeScore=328.0427;InbreedingCoeff=0.4742;MQ=67.76;MQ0=19;MQRankSum=-5.625;QD=11.74;ReadPosRankSum=-3.907;VQSLOD=0.0851;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.25:0,78,4620	0/0:11,0:11:33.10:0,33,1582	0/0:98,0:42:60.56:0,61,1811	0/0:135,0:56:95.06:0,95,2208	0/0:4,17:29:3.74:0,4,14	0/0:23,0:23:63.17:0,63,3185	0/0:23,0:23:60.17:0,60,3064	1/1:23,0:22:35.64:333,36,0	0/0:30,0:30:84.26:0,84,4502	0/0:28,0:28:84.23:0,84,3831	0/0:18,0:18:51.13:0,51,2486	0/0:23,0:23:68.99:0,69,3832	0/0:17,0:17:51.16:0,51,2543	0/0:19,0:19:57.18:0,57,3738	1/1:11,2:15:11.88:189,12,0	0/1:23,1:27:99:238,0,385	0/0:34,0:34:90.24:0,90,4932	0/0:26,0:26:78.25:0,78,4401	1/1:6,0:13:28.31:374,28,0	0/0:6,8:19:3.01:0,3,33	0/1:9,0:9:0.01:0,0,0	1/1:13,0:26:2.97:47,3,0	0/0:30,0:30:90.29:0,90,4833	0/0:39,0:39:99:0,111,6039	0/0:24,0:24:69.21:0,69,3304	0/1:20,2:22:99:569,0,337	0/1:3,15:22:48.11:385,0,48	0/1:8,0:8:11.11:11,0,142
chr10	103714781	.	CTG	C	851.60	PASS	AB=0.819;AC=14;AF=0.250;AN=56;BaseQRankSum=9.379;DP=770;FS=32.074;HRun=0;HaplotypeScore=170.6259;InbreedingCoeff=0.4383;MQ=78.06;MQ0=13;MQRankSum=-3.697;QD=5.26;ReadPosRankSum=-2.628;VQSLOD=0.9692;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.31:0,90,1828	0/0:12,0:12:36.12:0,36,707	0/0:103,0:49:50.43:0,50,1501	0/0:127,0:69:69.74:0,70,1556	1/1:17,11:27:2.72:31,3,0	0/0:23,0:23:66.23:0,66,1314	0/0:22,0:22:63.22:0,63,1273	0/0:12,0:11:4.25:0,4,341	0/0:24,0:24:69.24:0,69,1402	0/0:30,0:30:87.30:0,87,1698	0/0:17,0:17:51.17:0,51,1009	0/0:20,0:20:56.24:0,56,1142	0/0:18,0:18:54.18:0,54,1042	0/0:18,0:18:54.19:0,54,1096	1/1:7,5:12:5.88:36,6,0	0/1:16,9:25:64.45:126,0,64	0/0:33,0:33:93.29:0,93,1847	0/0:28,0:28:84.29:0,84,1697	0/1:7,2:9:41.65:197,0,42	1/1:8,5:13:3.01:32,3,0	0/1:8,0:8:0.03:0,0,0	0/1:2,17:19:0:0,0,0	0/0:27,0:27:81.28:0,81,1618	0/0:39,0:39:99:0,108,2125	0/0:23,0:23:69.22:0,69,1333	0/1:16,4:19:96.52:350,0,97	1/1:18,3:21:20.23:213,20,0	0/1:7,0:7:10.03:18,0,10
chr10	103715715	.	ATG	A	3500.95	PASS	AB=0.578;AC=21;AF=0.375;AN=56;BaseQRankSum=13.802;DP=811;FS=50.612;HRun=0;HaplotypeScore=151.6633;InbreedingCoeff=0.9053;MQ=52.82;MQ0=18;MQRankSum=-7.991;QD=15.03;ReadPosRankSum=1.326;VQSLOD=1.6841;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,117,1904	0/0:15,0:15:36.12:0,36,589	0/0:33,1:12:4.02:0,4,95	0/0:44,0:14:8.65:0,9,219	1/1:1,20:21:24.07:309,24,0	0/0:21,1:22:18.57:0,19,835	0/0:21,1:22:24.77:0,25,966	1/1:8,17:25:48.15:601,48,0	0/0:40,0:40:99:0,111,1849	0/0:45,0:45:99:0,123,2010	0/0:21,0:21:42.13:0,42,682	0/0:34,0:34:93.30:0,93,1527	0/0:40,0:40:99:0,105,1745	0/0:44,0:44:99:0,118,1881	1/1:2,18:20:14.66:192,15,0	1/1:6,12:18:21.03:269,21,0	0/0:37,0:37:93.32:0,93,1549	0/0:37,0:37:56.99:0,57,1367	1/1:7,7:12:30.04:349,30,0	1/1:10,15:26:18.05:218,18,0	1/1:5,36:40:26.89:344,27,0	1/1:5,13:18:8.99:97,9,0	0/0:28,0:28:75.24:0,75,1215	0/0:39,0:39:99:0,105,1739	0/0:31,0:31:81.27:0,81,1334	0/1:7,19:24:2.57:490,0,3	1/1:5,11:16:33.10:414,33,0	1/1:1,6:7:18.05:217,18,0
chr10	103715767	.	GCACA	G	136.55	PASS	AB=0.993;AC=10;AF=0.179;AN=56;BaseQRankSum=8.377;DP=886;FS=4.958;HRun=0;HaplotypeScore=166.3161;InbreedingCoeff=0.2603;MQ=47.74;MQ0=34;MQRankSum=-4.817;QD=1.08;ReadPosRankSum=0.270;VQSLOD=2.5135;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,129,3696	0/0:11,0:12:15.65:0,16,655	0/0:81,0:6:18.06:0,18,416	0/0:86,0:15:38.64:0,39,910	0/0:27,0:27:2.91:0,3,15	0/0:29,1:30:65.15:0,65,2336	0/0:33,0:33:99:0,99,2797	0/1:13,0:13:13.10:13,0,268	0/0:41,0:41:99:0,111,3112	0/0:39,0:39:99:0,105,2854	0/0:18,0:18:54.18:0,54,1481	0/0:33,0:32:93.31:0,93,2602	0/0:36,1:37:47.21:0,47,2938	0/0:45,0:45:99:0,133,3547	0/1:12,0:12:0:0,0,0	1/1:10,0:10:2.56:25,3,0	0/0:40,0:40:99:0,120,3412	0/0:34,1:36:48.66:0,49,2386	0/1:12,0:12:64.59:65,0,146	0/0:39,0:36:1.21:0,1,5	1/1:21,0:20:1.99:48,2,0	0/1:24,0:23:0.08:0,0,0	0/0:22,0:22:39.71:0,40,1498	0/0:63,1:65:99:0,172,4856	0/0:20,0:20:19.69:0,20,1319	0/1:21,1:22:87.20:87,0,571	0/1:12,0:11:22.29:22,0,40	0/0:6,0:6:5.81:0,6,84
chr10	103715808	.	T	TGC	459.40	PASS	AB=0.927;AC=10;AF=0.179;AN=56;BaseQRankSum=8.979;DP=947;FS=32.028;HRun=0;HaplotypeScore=165.5557;InbreedingCoeff=0.3472;MQ=46.67;MQ0=62;MQRankSum=-8.912;QD=3.26;ReadPosRankSum=-0.903;VQSLOD=1.4000;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,1871	0/0:8,0:8:21.07:0,21,310	0/0:73,0:9:21.21:0,21,205	0/0:92,0:7:10.56:0,11,118	0/0:23,1:23:0.47:0,0,1	0/0:30,0:29:83.85:0,84,1199	0/0:43,0:43:99:0,122,1749	0/0:31,0:20:13.72:0,14,191	0/0:52,0:52:99:0,147,1993	0/0:33,0:33:96.26:0,96,1402	0/0:19,0:18:51.17:0,51,777	0/0:41,0:41:99:0,117,1647	0/0:37,0:37:99:0,103,1388	0/0:46,0:45:99:0,129,1865	0/1:8,4:12:0.02:0,0,0	0/1:16,0:16:0.96:1,0,16	0/0:44,0:44:99:0,126,1802	0/0:38,0:38:99:0,103,1403	0/1:13,2:8:64.37:113,0,64	0/1:33,0:31:4.04:14,0,4	1/1:21,0:17:0.47:1,0,0	0/0:37,2:38:11.66:0,12,59	0/0:14,0:14:39.09:0,39,529	0/0:77,0:77:99:0,199,2852	0/0:17,0:17:47.74:0,48,675	1/1:25,2:27:14.85:365,15,0	0/1:12,1:12:11.78:77,0,12	0/1:4,0:4:12.18:12,0,20
chr10	103715810	.	T	TGC	1228.17	PASS	AB=0.819;AC=14;AF=0.250;AN=56;BaseQRankSum=10.547;DP=916;FS=47.613;HRun=0;HaplotypeScore=153.9432;InbreedingCoeff=0.4376;MQ=47.26;MQ0=60;MQRankSum=-10.153;QD=6.40;ReadPosRankSum=-2.210;VQSLOD=1.3968;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,1906	0/0:7,0:7:21.07:0,21,327	0/0:73,0:8:13.46:0,13,192	0/0:88,0:8:8.07:0,8,127	0/0:12,7:18:0.47:0,0,1	0/0:30,0:29:83.85:0,84,1268	0/0:44,0:44:99:0,125,1861	0/1:30,0:19:21.70:22,0,123	0/0:51,0:51:99:0,150,2096	0/0:34,0:34:82.94:0,83,1474	0/0:20,0:19:54.17:0,54,849	0/0:41,0:41:99:0,120,1731	0/0:34,0:34:99:0,102,1429	0/0:48,0:47:99:0,120,1940	0/1:10,2:12:0.02:0,0,0	1/1:12,1:13:4.94:22,5,0	0/0:42,0:42:99:0,123,1836	0/0:39,0:39:86.45:0,86,1452	0/1:12,0:7:10.99:164,0,11	0/1:17,10:26:4.04:14,0,4	1/1:19,1:16:0.47:1,0,0	0/1:18,19:36:3.02:3,0,27	0/0:14,0:14:39.08:0,39,511	0/0:77,0:77:99:0,198,2985	0/0:16,0:16:47.73:0,48,696	1/1:13,13:26:36.57:877,37,0	0/1:6,6:11:10.19:203,0,10	1/1:2,1:3:5.69:67,6,0
chr10	103715813	.	G	GCA	557.12	PASS	AB=0.949;AC=12;AF=0.214;AN=56;BaseQRankSum=9.774;DP=936;FS=28.590;HRun=0;HaplotypeScore=167.1870;InbreedingCoeff=0.1838;MQ=47.11;MQ0=62;MQRankSum=-9.463;QD=2.65;ReadPosRankSum=-2.217;VQSLOD=0.7957;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,1997	0/0:8,0:8:21.07:0,21,339	0/0:72,0:9:27.09:0,27,418	0/0:87,0:9:21.01:0,21,326	0/0:18,1:18:0.47:0,0,1	0/0:32,0:31:86.94:0,87,1342	0/0:45,0:45:99:0,132,2069	0/1:36,0:25:99:149,0,270	0/0:52,0:52:99:0,154,2473	0/0:35,0:35:68.43:0,68,1553	0/0:19,0:18:51.17:0,51,832	0/0:42,0:42:99:0,123,1960	0/0:37,0:37:99:0,108,1718	0/0:48,0:47:99:0,135,2179	0/1:13,0:12:0.02:0,0,0	0/1:9,4:13:8.73:70,0,9	0/0:39,0:39:99:0,114,1810	0/0:41,0:41:78.36:0,78,1575	0/1:14,0:8:78.81:89,0,79	0/1:29,0:28:3.65:14,0,4	1/1:23,0:19:0.42:1,0,0	0/1:36,3:38:6.25:6,0,27	0/0:13,0:13:36.11:0,36,557	0/0:77,0:77:99:0,199,3192	0/0:17,0:17:47.83:0,48,744	0/1:23,3:26:99:304,0,127	0/1:13,0:12:38.27:38,0,64	1/1:4,0:4:4.50:17,4,0
chr10	103715822	.	AGT	A	236.90	PASS	AB=0.818;AC=6;AF=0.107;AN=56;BaseQRankSum=7.729;DP=933;FS=2.705;HRun=0;HaplotypeScore=172.2443;InbreedingCoeff=0.1611;MQ=47.22;MQ0=57;MQRankSum=-7.271;QD=1.97;ReadPosRankSum=-0.309;VQSLOD=2.7550;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,123,2031	0/0:7,0:7:21.07:0,21,350	0/0:70,0:9:27.07:0,27,399	0/0:80,0:6:17.89:0,18,246	0/0:15,7:22:0.34:0,0,1	0/0:30,0:29:77.25:0,77,1264	0/0:49,0:49:99:0,123,2083	0/0:37,0:26:30.73:0,31,485	0/0:53,0:53:99:0,154,2606	0/0:35,0:35:87.14:0,87,1654	0/0:21,0:20:51.16:0,51,851	0/0:40,0:40:99:0,105,1786	0/0:41,0:41:99:0,123,2011	0/0:49,0:49:99:0,135,2207	0/1:13,0:12:0.01:0,0,0	0/0:16,0:16:11.97:0,12,150	0/0:33,0:33:90.30:0,90,1531	0/0:35,0:35:89.85:0,90,1577	0/0:20,0:10:14.44:0,14,170	0/0:14,8:22:2.69:0,3,11	0/1:21,1:19:0:0,0,1	0/1:24,19:42:6.03:6,0,51	0/0:13,0:13:30.10:0,30,510	0/0:77,0:77:99:0,190,3184	0/0:16,0:17:45.15:0,45,771	0/1:18,10:27:99:261,0,339	0/1:7,3:10:25.04:47,0,25	0/1:2,1:3:25.33:25,0,73
chr10	103715831	.	GCA	G	80.32	PASS	AB=0.911;AC=7;AF=0.125;AN=56;BaseQRankSum=7.559;DP=948;FS=1.886;HRun=0;HaplotypeScore=185.0231;InbreedingCoeff=0.2755;MQ=47.75;MQ0=47;MQRankSum=-6.471;QD=0.55;ReadPosRankSum=-3.690;VQSLOD=1.8419;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,111,2255	0/0:8,0:8:24.08:0,24,475	0/0:62,1:10:26.67:0,27,389	0/0:74,1:8:21.07:0,21,385	1/1:23,5:28:0.95:3,1,0	0/0:33,0:32:93.32:0,93,1778	0/0:51,0:51:99:0,144,2802	0/0:31,0:20:25.06:0,25,661	0/0:59,0:59:99:0,174,3257	0/0:39,0:39:99:0,103,2160	0/0:21,0:20:57.20:0,57,1123	0/0:39,0:39:99:0,114,2206	0/0:43,0:43:99:0,129,2542	0/0:49,0:49:99:0,141,2700	0/1:13,1:13:0.32:0,0,0	0/0:16,1:17:12.38:0,12,217	0/0:35,1:36:89.77:0,90,1905	0/0:36,0:36:78.24:0,78,1951	0/0:20,0:8:22.61:0,23,282	0/0:17,8:25:1.82:0,2,9	0/1:19,0:18:0.13:0,0,0	0/1:41,7:47:1.92:2,0,58	0/0:16,0:16:42.14:0,42,744	0/0:76,0:76:99:0,201,3905	0/0:17,1:18:40.76:0,41,771	0/1:22,4:26:99:153,0,472	0/1:8,1:9:4.32:4,0,91	0/0:3,0:3:3.30:0,3,80
chr10	103715833	.	A	ATG	245.12	PASS	AB=0.955;AC=10;AF=0.179;AN=56;BaseQRankSum=7.874;DP=962;FS=0.000;HRun=0;HaplotypeScore=192.4078;InbreedingCoeff=0.0485;MQ=47.84;MQ0=45;MQRankSum=-8.578;QD=0.93;ReadPosRankSum=-3.945;VQSLOD=0.9662;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,104,1318	0/0:8,0:8:24.07:0,24,301	0/1:61,1:10:7.51:8,0,184	0/0:71,0:8:21.07:0,21,266	0/0:27,4:31:0.47:0,0,1	0/0:34,0:33:93.27:0,93,1187	0/0:54,0:54:99:0,132,1689	0/1:29,0:19:30.53:31,0,226	0/0:60,0:60:99:0,168,2142	0/0:39,0:39:99:0,108,1355	0/0:21,0:20:51.17:0,51,669	0/0:40,0:40:99:0,105,1377	0/0:45,0:45:99:0,129,1663	0/0:49,0:49:99:0,132,1698	0/1:14,1:13:0:0,0,0	0/0:17,1:18:4.50:0,4,85	0/0:35,0:35:84.73:0,85,1125	0/0:37,0:37:30.27:0,30,1128	0/1:21,0:8:31.87:32,0,136	0/1:27,0:27:1.39:20,0,1	0/1:19,0:18:0.01:0,0,0	0/1:46,3:48:35.41:35,0,38	0/0:16,0:16:42.09:0,42,522	0/0:77,0:77:99:0,180,2288	0/0:16,0:18:37.91:0,38,453	0/1:26,2:28:99:179,0,202	0/1:10,0:10:12.34:12,0,87	0/1:2,1:3:20.95:57,0,21
chr10	103715837	.	GTGTGAGTGTGTGCA	G	325.70	PASS	AB=0.991;AC=7;AF=0.125;AN=56;BaseQRankSum=8.672;DP=971;FS=0.748;HRun=0;HaplotypeScore=357.9420;InbreedingCoeff=0.0614;MQ=48.18;MQ0=46;MQRankSum=-8.263;QD=2.67;ReadPosRankSum=-2.896;VQSLOD=1.2499;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,108,5703	0/0:9,0:9:27.08:0,27,1263	0/0:55,0:10:22.91:0,23,431	0/0:70,0:9:25.60:0,26,636	0/0:33,0:33:2.86:0,3,32	0/0:34,0:33:96.30:0,96,4837	0/0:53,0:53:99:0,141,7291	0/1:27,0:18:45.01:45,0,224	0/0:60,0:60:99:0,165,9500	0/0:43,0:43:44.74:0,45,5809	0/0:20,0:19:51.18:0,51,2674	0/0:43,0:43:99:0,117,6486	0/0:47,0:47:99:0,141,7445	0/0:49,0:49:99:0,141,7180	1/1:16,0:14:2.61:24,3,0	0/1:18,0:18:26.63:27,0,63	0/0:34,0:34:71.94:0,72,5249	0/0:37,0:37:21.05:0,21,5234	0/1:20,1:8:99:135,0,119	0/0:27,0:27:17.38:0,17,202	0/0:9,10:18:0.89:0,1,2	0/0:51,0:50:0.01:0,0,40	0/0:18,0:18:48.12:0,48,2342	0/0:79,0:79:99:0,199,10556	0/0:23,0:23:48.13:0,48,1945	0/1:29,0:28:99:189,0,603	0/1:11,0:11:30.04:30,0,99	0/0:3,0:3:2.41:0,2,24
chr10	103715839	.	G	GTGTGTT	1077.99	PASS	AB=0.921;AC=10;AF=0.179;AN=56;BaseQRankSum=11.839;DP=964;FS=1.645;HRun=0;HaplotypeScore=251.3357;InbreedingCoeff=0.4529;MQ=48.28;MQ0=42;MQRankSum=-11.747;QD=6.12;ReadPosRankSum=-9.479;VQSLOD=0.2359;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,2380	0/0:10,0:10:30.06:0,30,580	0/0:54,0:10:12.94:0,13,237	0/0:66,0:9:21.03:0,21,408	1/1:30,3:33:17.71:73,18,0	0/0:34,0:33:96.19:0,96,2063	0/0:52,0:52:99:0,138,3041	0/0:26,0:18:41.84:0,42,472	0/0:60,0:60:99:0,172,3871	0/0:44,0:44:99:0,119,2528	0/0:18,0:18:51.16:0,51,1133	0/0:42,0:42:99:0,117,2594	0/0:49,0:49:99:0,144,3156	0/0:49,0:49:99:0,141,3065	0/0:16,0:14:2.54:0,3,12	0/0:18,0:18:12.04:0,12,193	0/0:34,0:34:96.23:0,96,2069	0/0:37,0:37:68.12:0,68,2099	0/0:19,0:7:3.56:0,4,293	1/1:28,0:28:13.52:140,14,0	0/1:20,0:18:11.03:11,0,20	1/1:40,12:51:47.05:245,47,0	0/0:18,0:18:48.02:0,48,933	0/0:78,0:79:99:0,202,4255	0/0:23,0:23:49.90:0,50,802	0/1:27,2:28:99:602,0,430	0/1:11,0:11:30.79:31,0,189	0/1:2,1:3:60.35:134,0,60
chr10	103715840	.	TGA	T	119.21	PASS	AB=0.991;AC=6;AF=0.107;AN=56;BaseQRankSum=7.822;DP=954;FS=14.822;HRun=0;HaplotypeScore=196.1630;InbreedingCoeff=0.1113;MQ=48.24;MQ0=42;MQRankSum=-6.457;QD=1.07;ReadPosRankSum=-3.594;VQSLOD=1.0757;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,1938	0/0:10,0:10:30.06:0,30,478	0/1:53,0:10:0.90:1,0,183	0/0:63,2:9:21.04:0,21,346	0/0:30,3:33:2.91:0,3,19	0/0:34,0:33:96.27:0,96,1696	0/0:51,0:51:99:0,141,2514	0/0:25,0:18:22.73:0,23,270	0/0:59,1:60:99:0,172,3115	0/0:42,0:42:75.66:0,76,2005	0/0:17,0:17:51.14:0,51,885	0/0:41,0:41:99:0,117,2152	0/0:50,0:50:99:0,150,2646	0/0:49,0:49:99:0,132,2516	1/1:16,0:14:1.15:3,1,0	0/0:18,0:18:10.87:0,11,97	0/0:33,0:33:75.23:0,75,1582	0/0:34,1:35:60.38:0,60,1707	0/0:20,0:7:2.38:0,2,104	0/0:29,0:29:18.87:0,19,114	0/0:20,0:18:1.04:0,1,3	0/0:48,5:52:18.44:0,18,100	0/0:18,0:18:47.68:0,48,770	0/0:78,0:78:99:0,202,3525	0/0:23,0:23:30.56:0,31,606	0/1:27,1:27:99:144,0,388	0/1:11,0:11:38.82:39,0,54	0/1:3,0:3:34.20:34,0,41
chr10	103715845	.	GTGTGCA	G	958.07	PASS	AB=0.944;AC=10;AF=0.179;AN=56;BaseQRankSum=10.212;DP=938;FS=14.818;HRun=0;HaplotypeScore=252.8977;InbreedingCoeff=0.2277;MQ=48.27;MQ0=37;MQRankSum=-9.876;QD=5.60;ReadPosRankSum=-3.133;VQSLOD=0.6792;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.33:0,96,3023	0/0:10,0:10:30.10:0,30,889	0/0:50,0:8:15.05:0,15,292	0/0:61,0:11:27.05:0,27,478	0/0:30,2:32:0.63:0,1,20	0/0:32,0:31:84.29:0,84,2805	0/0:49,0:49:99:0,135,4261	0/1:18,1:14:99:191,0,110	0/0:60,0:60:99:0,162,5356	0/0:43,0:43:59.11:0,59,3309	0/0:16,0:16:48.15:0,48,1550	0/0:47,0:47:99:0,129,4016	0/0:51,0:51:99:0,144,4459	0/0:48,0:48:99:0,132,4186	1/1:11,4:13:2.97:23,3,0	0/1:13,5:18:17.68:158,0,18	0/0:30,0:30:84.01:0,84,2862	0/0:34,0:34:30.75:0,31,2896	1/1:21,0:9:4.79:214,5,0	0/0:30,0:30:19.75:0,20,175	0/0:21,0:20:0.32:0,0,1	0/1:50,2:51:35.03:35,0,38	0/0:17,0:17:42.14:0,42,1433	0/0:78,0:78:99:0,150,6084	0/0:22,0:22:33.05:0,33,1224	0/1:29,1:29:99:396,0,421	0/1:13,0:13:42.70:43,0,77	0/1:3,0:3:1.05:39,0,1
chr10	103715847	.	GTGCA	G	844.99	PASS	AB=0.971;AC=10;AF=0.179;AN=56;BaseQRankSum=9.639;DP=929;FS=5.127;HRun=0;HaplotypeScore=219.4392;InbreedingCoeff=0.0149;MQ=48.53;MQ0=35;MQRankSum=-9.018;QD=4.45;ReadPosRankSum=-1.161;VQSLOD=2.2217;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,2553	0/0:11,0:11:33.11:0,33,782	0/0:51,0:6:15.05:0,15,280	0/0:61,0:11:29.90:0,30,493	0/1:27,3:30:0.38:0,0,25	0/0:31,0:30:84.08:0,84,2190	0/0:48,0:48:99:0,138,3507	0/1:16,0:11:14.28:14,0,71	0/0:60,0:60:99:0,165,4305	0/0:42,1:43:26.03:0,26,2648	0/0:16,0:16:48.15:0,48,1235	0/0:47,0:47:99:0,129,3228	0/0:51,0:51:99:0,144,3591	0/0:50,0:50:99:0,138,3501	1/1:13,2:13:2.61:58,3,0	0/1:18,0:18:17.45:116,0,17	0/0:31,0:31:74.61:0,75,2237	0/0:35,0:35:41.35:0,41,2356	0/1:20,1:9:31.26:221,0,31	0/0:29,0:29:20.22:0,20,188	0/0:20,1:20:0.81:0,1,2	0/1:48,3:50:8.09:8,0,33	0/0:17,0:17:42.14:0,42,1143	0/0:79,0:79:99:0,156,4937	0/0:20,0:20:33.12:0,33,996	0/1:23,1:23:99:390,0,380	0/1:12,0:12:84.85:123,0,85	0/1:3,0:3:18.02:48,0,18
chr10	103715849	.	GCA	G	332.55	PASS	AB=0.908;AC=8;AF=0.143;AN=56;BaseQRankSum=10.494;DP=912;FS=3.745;HRun=0;HaplotypeScore=192.5648;InbreedingCoeff=0.0684;MQ=48.73;MQ0=31;MQRankSum=-9.572;QD=3.20;ReadPosRankSum=-1.644;VQSLOD=2.3444;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,1983	0/0:11,0:11:33.11:0,33,629	0/0:51,0:6:15.05:0,15,264	0/0:56,2:11:29.80:0,30,423	0/0:25,4:29:0.36:0,0,14	0/0:30,0:29:84.08:0,84,1638	0/0:48,0:48:99:0,138,2715	0/1:13,0:10:6.29:6,0,122	0/0:61,0:61:99:0,168,3280	0/0:43,1:44:98.07:0,98,2125	0/0:16,0:16:48.15:0,48,921	0/0:45,1:46:99:0,129,2436	0/0:49,0:49:99:0,144,2709	0/0:50,0:50:99:0,141,2718	1/1:10,3:12:2.65:24,3,0	0/1:18,0:18:10.74:34,0,11	0/0:30,1:31:71.61:0,72,1700	0/0:35,1:36:41.64:0,42,1835	0/1:17,1:9:25.13:70,0,25	0/0:22,3:27:11.19:0,11,118	0/0:20,0:20:0.73:0,1,2	0/0:46,2:49:4.76:0,5,54	0/0:16,0:16:42.14:0,42,851	0/0:76,0:76:99:0,156,3741	0/0:18,2:20:35.68:0,36,809	0/1:21,4:24:99:227,0,243	0/1:7,3:12:32.79:54,0,33	0/1:3,0:3:16.25:44,0,16
chr10	103715850	.	CATGT	C	673.35	PASS	AB=0.867;AC=8;AF=0.143;AN=56;BaseQRankSum=8.733;DP=907;FS=2.397;HRun=0;HaplotypeScore=216.4523;InbreedingCoeff=0.0800;MQ=48.68;MQ0=31;MQRankSum=-8.115;QD=6.07;ReadPosRankSum=-0.461;VQSLOD=2.7601;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,2710	0/0:11,0:11:33.10:0,33,836	0/0:51,0:6:15.02:0,15,296	0/0:58,0:11:30.02:0,30,574	0/0:28,1:29:0.16:0,0,26	0/0:30,0:29:78.34:0,78,2264	0/0:48,0:48:99:0,138,3723	0/0:13,0:10:3.19:0,3,162	0/0:58,0:58:99:0,169,4692	0/0:45,0:44:68.97:0,69,2886	0/0:15,0:15:45.15:0,45,1291	0/0:46,0:46:99:0,132,3492	0/0:50,0:50:99:0,144,3807	0/0:50,0:50:99:0,144,3800	1/1:11,3:12:2.61:40,3,0	0/1:13,5:18:18.01:135,0,18	0/0:32,0:32:92.51:0,93,2494	0/0:36,0:36:68.39:0,68,2654	0/1:16,2:9:65.29:194,0,65	0/0:27,0:27:26.24:0,26,246	0/1:17,3:20:0.08:0,0,0	0/0:46,4:49:4.46:0,4,50	0/0:16,0:16:42.14:0,42,1208	0/0:72,0:72:99:0,174,5274	0/0:21,0:21:47.89:0,48,1226	0/1:22,3:24:99:305,0,551	0/1:12,0:12:69.31:69,0,154	0/1:2,1:3:42.17:54,0,42
chr10	103715851	.	A	ATG	305.68	PASS	AB=0.871;AC=7;AF=0.125;AN=56;BaseQRankSum=7.634;DP=938;FS=1.647;HRun=0;HaplotypeScore=203.6876;InbreedingCoeff=0.2331;MQ=48.42;MQ0=31;MQRankSum=-7.511;QD=2.05;ReadPosRankSum=-5.009;VQSLOD=1.4856;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:87.28:0,87,1167	0/0:12,0:12:27.09:0,27,364	0/0:51,0:6:9.03:0,9,121	0/0:59,0:11:20.99:0,21,231	0/0:31,0:31:1.38:0,1,3	0/0:30,0:29:78.26:0,78,1053	0/0:49,0:49:99:0,123,1662	0/1:14,0:11:29.37:86,0,29	0/0:57,1:58:99:0,163,2169	0/0:43,0:43:90.68:0,91,1331	0/0:15,0:15:45.15:0,45,606	0/0:49,0:49:99:0,120,1613	0/0:50,0:50:99:0,129,1689	0/0:52,0:52:99:0,129,1698	0/0:17,0:16:2.35:0,2,9	0/0:19,0:19:0.64:0,1,39	0/0:35,0:35:89.88:0,90,1184	0/0:36,0:36:98.05:0,98,1250	0/1:15,2:9:30.44:105,0,30	0/0:27,0:29:2.68:0,3,53	0/1:21,2:23:0.01:0,0,0	1/1:50,1:51:16.03:95,16,0	0/0:16,0:16:42.13:0,42,552	0/0:70,0:71:99:0,184,2429	0/0:22,0:22:43.96:0,44,572	0/1:29,0:28:1.98:2,0,223	0/1:5,5:12:48.82:137,0,49	0/0:3,0:3:5.81:0,6,23
chr10	103715857	.	GCA	G	802.22	PASS	AB=0.849;AC=13;AF=0.232;AN=56;BaseQRankSum=10.983;DP=935;FS=6.826;HRun=0;HaplotypeScore=202.6784;InbreedingCoeff=0.2419;MQ=47.72;MQ0=35;MQRankSum=-9.806;QD=3.68;ReadPosRankSum=-4.612;VQSLOD=0.4656;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,99,1968	0/1:12,0:12:0.21:0,0,507	0/0:47,0:5:11.53:0,12,192	0/0:58,2:10:23.97:0,24,350	1/1:19,14:33:1.09:3,1,0	0/0:28,0:27:78.27:0,78,1506	0/0:49,0:49:99:0,141,2704	0/1:9,1:9:37.69:38,0,224	0/0:59,0:59:99:0,168,3280	0/0:44,0:43:99:0,103,2027	0/0:16,0:16:45.15:0,45,891	0/0:48,0:48:99:0,138,2701	0/0:50,0:50:99:0,147,2869	0/0:50,0:50:99:0,141,2663	0/0:17,2:18:2.39:0,2,13	0/1:22,1:23:13.84:14,0,21	0/0:35,0:35:99:0,102,1952	0/0:36,1:38:33.15:0,33,1849	0/1:12,1:9:16.01:16,0,188	1/1:13,15:28:17.02:245,17,0	0/0:23,2:23:0.67:0,1,2	1/1:30,25:53:22.26:137,22,0	0/0:18,0:18:48.15:0,48,893	0/0:67,0:68:99:0,183,3564	0/0:22,1:23:42.63:0,43,1010	0/1:20,8:28:99:322,0,415	0/1:7,5:12:35.01:107,0,35	0/1:2,2:4:31.73:72,0,32
chr10	103715866	.	TGA	T	331.33	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=10.928;DP=948;FS=14.585;HRun=0;HaplotypeScore=213.3454;InbreedingCoeff=0.2974;MQ=47.16;MQ0=40;MQRankSum=-10.026;QD=1.70;ReadPosRankSum=-3.348;VQSLOD=0.7869;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.24:0,93,1676	0/0:11,0:11:28.32:0,28,488	0/0:45,0:4:11.87:0,12,175	0/0:57,0:9:21.04:0,21,314	0/0:34,0:34:2.12:0,2,5	0/0:24,0:24:66.19:0,66,1184	0/0:51,0:51:99:0,143,2447	0/1:14,0:10:54.34:73,0,54	0/0:57,0:57:99:0,139,2541	0/0:38,0:37:87.47:0,87,1673	0/0:15,0:15:39.07:0,39,639	0/0:50,0:50:99:0,134,2370	0/0:53,0:53:99:0,133,2672	0/0:50,0:50:99:0,134,2347	0/0:23,1:23:5.48:0,5,68	1/1:26,0:26:9.32:49,9,0	0/0:36,0:36:81.37:0,81,1528	0/0:39,0:38:76.54:0,77,1559	0/1:17,0:15:99:110,0,103	1/1:30,2:32:4.68:48,5,0	0/0:27,0:25:1.25:0,1,3	1/1:52,3:52:1.62:19,2,0	0/0:16,0:16:45.13:0,45,798	0/0:66,1:67:99:0,178,3297	0/0:23,0:23:53.96:0,54,937	0/1:34,0:33:99:145,0,300	0/1:13,0:13:7.19:7,0,82	0/1:4,0:4:19.50:24,0,19
chr10	103715868	.	AGT	A	739.51	PASS	AB=0.850;AC=11;AF=0.196;AN=56;BaseQRankSum=9.710;DP=943;FS=12.469;HRun=0;HaplotypeScore=209.4729;InbreedingCoeff=0.2380;MQ=47.25;MQ0=43;MQRankSum=-10.377;QD=3.24;ReadPosRankSum=-2.671;VQSLOD=1.4324;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:90.29:0,90,1477	0/0:12,0:12:30.02:0,30,445	0/0:45,0:4:11.40:0,11,136	0/0:55,0:9:24.06:0,24,333	1/1:29,6:35:0.64:2,1,0	0/0:24,0:24:69.20:0,69,1108	0/0:53,0:53:99:0,132,2162	0/1:9,5:10:47.42:175,0,47	0/0:55,0:55:99:0,138,2261	0/0:37,0:36:71.30:0,71,1438	0/0:13,1:14:33.09:0,33,528	0/0:50,0:50:99:0,129,2080	0/0:55,0:55:99:0,151,2372	0/0:51,0:51:99:0,135,2179	0/0:20,4:23:5.78:0,6,86	1/1:18,7:25:8.35:76,8,0	0/0:33,0:33:87:0,87,1384	0/0:38,0:37:76.97:0,77,1341	0/1:9,10:15:53.64:319,0,54	0/1:31,1:32:2.22:6,0,2	0/0:15,12:25:0:0,0,0	0/1:52,2:51:2.51:3,0,3	0/0:16,0:16:42.14:0,42,709	0/0:66,1:67:99:0,175,2913	0/0:22,0:22:48.16:0,48,812	0/1:25,7:31:99:223,0,371	0/1:13,0:13:38.66:39,0,104	0/1:3,1:4:8.93:31,0,9
chr10	103715872	.	T	TGTGA	642.11	PASS	AB=0.926;AC=11;AF=0.196;AN=56;BaseQRankSum=9.348;DP=967;FS=10.864;HRun=0;HaplotypeScore=245.3845;InbreedingCoeff=0.3032;MQ=47.11;MQ0=43;MQRankSum=-9.591;QD=3.09;ReadPosRankSum=-5.185;VQSLOD=0.1334;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:90.71:0,91,1569	0/0:12,0:12:32.42:0,32,478	0/0:49,0:6:14.12:0,14,156	0/0:59,0:10:23.88:0,24,339	1/1:36,0:36:5.18:11,5,0	0/0:24,0:24:69.21:0,69,1230	0/0:56,0:56:99:0,153,2461	0/1:16,0:12:40.24:40,0,153	0/0:54,0:54:99:0,150,2623	0/0:40,0:39:99:0,101,1711	0/0:13,0:13:31.66:0,32,563	0/0:50,0:50:99:0,135,2351	0/0:56,0:56:99:0,157,2686	0/0:56,0:56:99:0,156,2571	0/0:17,7:23:5.99:0,6,108	0/1:19,6:25:52.27:70,0,52	0/0:32,0:32:81.23:0,81,1576	0/0:38,0:37:96.13:0,96,1588	0/0:19,0:15:43.20:0,43,461	0/0:35,0:35:8.11:0,8,91	1/1:28,0:25:0.71:2,1,0	1/1:51,2:50:20.08:95,20,0	0/0:16,0:16:42.14:0,42,764	0/0:69,0:69:99:0,183,3301	0/0:22,0:22:48.16:0,48,886	0/1:26,7:32:99:524,0,690	0/1:13,0:13:34.56:35,0,251	0/1:4,0:4:4.97:5,0,21
chr10	103715877	.	GTGCA	G	52.52	PASS	AB=0.958;AC=13;AF=0.232;AN=56;BaseQRankSum=9.039;DP=937;FS=5.005;HRun=0;HaplotypeScore=229.8375;InbreedingCoeff=0.2550;MQ=47.36;MQ0=39;MQRankSum=-7.809;QD=0.18;ReadPosRankSum=-2.716;VQSLOD=1.9198;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:87.30:0,87,2243	0/0:12,0:12:30.10:0,30,744	0/0:46,0:6:14.83:0,15,236	0/1:59,0:11:11.35:11,0,392	1/1:31,0:31:2.17:6,2,0	0/0:24,0:24:65.44:0,65,1602	0/0:51,0:51:99:0,135,3440	0/1:15,1:13:49.62:50,0,263	0/0:54,0:54:99:0,128,3452	0/1:40,0:39:1.88:2,0,2167	0/0:13,0:13:11.85:0,12,783	0/0:49,0:49:99:0,135,3332	0/0:56,0:56:99:0,156,3836	0/0:52,0:52:99:0,148,3782	0/0:26,0:25:5.41:0,5,109	1/1:22,0:22:7.63:30,8,0	0/0:32,0:32:80.23:0,80,2122	0/0:35,0:34:45.86:0,46,2203	0/0:20,0:16:40.49:0,40,415	0/1:30,4:34:12.74:13,0,47	0/0:26,2:25:0.20:0,0,1	0/1:46,0:44:2.99:3,0,4	0/0:15,0:15:44.52:0,45,1118	0/0:68,0:68:99:0,183,4629	0/0:23,0:23:50.90:0,51,1215	0/1:33,0:32:5.23:5,0,612	0/1:11,2:13:54.74:55,0,193	1/1:3,0:3:4.49:16,4,0
chr10	103715879	.	GCA	G	112.52	PASS	AB=0.945;AC=12;AF=0.214;AN=56;BaseQRankSum=8.167;DP=922;FS=6.400;HRun=0;HaplotypeScore=198.4596;InbreedingCoeff=0.1667;MQ=47.24;MQ0=40;MQRankSum=-6.865;QD=0.41;ReadPosRankSum=-3.559;VQSLOD=1.3116;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.30:0,87,1726	0/0:11,0:11:30.10:0,30,580	0/0:45,2:6:17.85:0,18,248	0/1:57,2:10:11.36:11,0,335	1/1:27,2:29:0.85:3,1,0	0/0:23,0:23:65.44:0,65,1235	0/0:52,0:52:99:0,147,2801	0/0:16,0:13:6.50:0,6,221	0/0:51,0:51:99:0,106,2628	0/1:35,2:36:39.44:39,0,1629	0/0:13,0:13:11.86:0,12,587	0/0:48,0:48:99:0,137,2580	0/0:55,0:55:99:0,151,2999	0/0:50,0:50:99:0,147,2818	0/0:23,0:23:5.46:0,5,92	0/1:20,2:22:21.18:44,0,21	0/0:29,1:30:77.81:0,78,1638	0/0:34,1:34:57.94:0,58,1729	0/0:21,0:17:32.94:0,33,190	0/1:30,4:34:20.84:21,0,26	0/0:29,1:27:0.20:0,0,1	1/1:44,1:43:0.09:4,0,0	0/0:15,0:15:44.52:0,45,842	0/0:70,0:70:99:0,196,3756	0/0:21,1:22:51.10:0,51,922	0/1:32,2:33:77.77:78,0,657	0/1:13,0:13:5.69:6,0,125	1/1:1,2:3:4.82:37,5,0
chr10	103715888	.	TGC	T	284.42	PASS	AB=0.993;AC=14;AF=0.250;AN=56;BaseQRankSum=9.177;DP=945;FS=14.506;HRun=0;HaplotypeScore=198.1442;InbreedingCoeff=0.4528;MQ=47.09;MQ0=45;MQRankSum=-8.663;QD=1.30;ReadPosRankSum=-0.224;VQSLOD=1.0103;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,1:41:99:0,108,1911	0/0:11,0:11:30.10:0,30,578	0/0:42,0:5:15.05:0,15,279	0/0:64,0:9:24.03:0,24,374	1/1:29,0:29:0.89:3,1,0	0/0:24,0:24:69.21:0,69,1299	0/0:55,0:55:99:0,156,3001	0/0:20,0:18:48.05:0,48,703	0/0:47,0:47:99:0,135,2569	0/0:39,0:38:80.02:0,80,1656	0/0:16,0:15:36.10:0,36,647	0/0:46,0:46:99:0,131,2597	0/0:51,1:52:99:0,108,2975	0/0:54,0:54:99:0,158,3083	1/1:23,0:23:0.44:1,0,0	0/1:22,0:22:20.49:20,0,53	0/0:28,0:28:81.03:0,81,1476	0/0:40,0:39:92.35:0,92,2101	0/1:23,0:18:94.67:95,0,481	1/1:39,0:39:7.54:66,8,0	0/1:32,1:29:0.04:0,0,0	0/0:44,0:42:1.62:0,2,8	0/0:15,0:15:44.89:0,45,855	0/0:63,2:65:99:0,180,3385	0/0:23,0:23:54.16:0,54,1022	0/1:35,0:33:99:100,0,750	1/1:11,0:11:4.46:122,4,0	1/1:3,0:3:2.68:11,3,0
chr10	103715894	.	T	TTTGA	320.23	PASS	AB=0.976;AC=7;AF=0.125;AN=56;BaseQRankSum=8.777;DP=999;FS=0.000;HRun=0;HaplotypeScore=234.9472;InbreedingCoeff=0.6463;MQ=46.52;MQ0=50;MQRankSum=-7.749;QD=2.09;ReadPosRankSum=-9.384;VQSLOD=0.1446;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,114,2191	0/0:16,0:16:42.09:0,42,750	0/0:46,0:6:15.05:0,15,273	0/0:67,0:9:21.04:0,21,365	1/1:28,0:28:18.85:89,19,0	0/0:25,0:24:69.66:0,70,1316	0/0:55,0:55:99:0,150,2870	0/0:41,0:36:77.43:0,77,1003	0/0:50,0:50:99:0,141,2685	0/0:40,0:39:99:0,100,1908	0/0:15,0:14:36.11:0,36,702	0/0:50,0:50:99:0,141,2833	0/0:55,0:55:99:0,160,3242	0/0:56,0:56:99:0,156,3030	0/0:24,0:24:5.92:0,6,56	0/0:21,0:21:6.96:0,7,85	0/0:27,0:27:63.23:0,63,1448	0/0:41,0:40:99:0,116,2290	0/0:23,0:16:41.69:0,42,590	0/1:40,1:41:58.82:85,0,59	1/1:40,0:33:0.29:1,0,0	1/1:40,4:42:32.68:273,33,0	0/0:16,0:16:48.15:0,48,966	0/0:62,0:62:99:0,171,3233	0/0:26,0:26:60.17:0,60,1145	0/0:33,0:30:85.72:0,86,1260	0/0:11,0:11:16.67:0,17,265	0/0:3,0:2:3.01:0,3,44
chr10	103715912	.	AGT	A	193.73	PASS	AB=0.908;AC=9;AF=0.167;AN=54;BaseQRankSum=6.959;DP=1062;FS=2.120;HRun=0;HaplotypeScore=203.5577;InbreedingCoeff=0.1756;MQ=45.58;MQ0=47;MQRankSum=-7.211;QD=0.68;ReadPosRankSum=-2.553;VQSLOD=2.5465;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:84.72:0,85,1392	0/0:17,0:17:45.15:0,45,770	0/0:39,0:6:8.99:0,9,113	0/0:69,0:9:18.05:0,18,238	./.	0/0:26,0:25:66.15:0,66,1048	0/0:55,0:55:99:0,138,2292	0/1:60,9:54:99:173,0,934	0/0:46,0:46:99:0,123,2001	0/0:54,0:51:99:0,131,2122	0/0:14,0:13:27.09:0,27,432	0/0:52,0:52:99:0,141,2352	0/0:52,0:52:99:0,135,2199	0/0:57,0:57:99:0,162,2580	0/0:22,3:24:0:0,0,0	0/0:20,0:20:4.56:0,5,65	0/0:30,0:30:87.30:0,87,1457	0/0:43,0:42:99:0,112,1795	0/1:32,3:24:22.55:23,0,546	1/1:24,18:42:2.54:10,3,0	0/1:54,0:44:7.97:16,0,8	1/1:34,3:36:0.11:1,0,0	0/0:18,0:18:50.11:0,50,764	0/0:62,0:63:99:0,160,2658	0/0:29,0:29:68.28:0,68,1154	0/1:34,2:31:5.86:6,0,555	0/1:8,3:11:61.58:83,0,62	0/0:5,0:4:7.23:0,7,41
chr10	103715922	.	AGT	A	339.44	PASS	AB=0.781;AC=7;AF=0.125;AN=56;BaseQRankSum=8.754;DP=1021;FS=6.008;HRun=0;HaplotypeScore=187.0948;InbreedingCoeff=0.1042;MQ=46.22;MQ0=44;MQRankSum=-8.241;QD=1.59;ReadPosRankSum=-3.198;VQSLOD=1.5821;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:87.77:0,88,1443	0/0:18,0:18:45.15:0,45,761	0/0:33,0:3:9.03:0,9,138	0/0:61,0:6:15.05:0,15,186	0/0:10,8:22:0:0,0,0	0/0:25,0:24:57.16:0,57,960	0/0:58,0:58:99:0,135,2255	0/1:66,5:56:68.45:68,0,806	0/0:45,0:45:99:0,114,1872	0/0:59,0:57:99:0,132,2214	0/0:11,0:11:24.08:0,24,402	0/0:51,0:51:99:0,138,2341	0/0:50,0:50:99:0,129,2098	0/0:56,1:57:99:0,111,2377	0/0:17,1:19:2.74:0,3,12	0/0:16,3:19:1.97:0,2,18	0/0:33,0:34:83.76:0,84,1350	0/0:40,0:40:99:0,114,1894	0/0:37,1:22:4.93:0,5,355	0/1:21,16:40:24.35:24,0,29	1/1:45,0:36:3.27:21,3,0	0/0:16,3:22:1.71:0,2,5	0/0:17,0:17:38.92:0,39,618	0/0:63,0:63:99:0,157,2579	0/0:28,0:28:71.05:0,71,1172	0/1:29,4:30:99:122,0,374	0/1:8,5:13:68.82:123,0,69	0/1:5,3:7:20.38:104,0,20
chr10	103715927	.	GTGTGTGCA	G	411.11	PASS	AB=0.944;AC=8;AF=0.143;AN=56;BaseQRankSum=7.666;DP=1014;FS=36.817;HRun=0;HaplotypeScore=273.0972;InbreedingCoeff=0.5460;MQ=46.38;MQ0=44;MQRankSum=-7.161;QD=3.24;ReadPosRankSum=-3.755;VQSLOD=0.6201;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:90.31:0,90,3297	0/0:17,0:17:45.15:0,45,1414	0/0:32,0:3:9.03:0,9,237	0/0:56,0:5:11.36:0,11,225	0/0:23,1:23:0:0,0,0	0/0:24,0:23:57.25:0,57,2273	0/0:57,0:57:99:0,135,4757	0/0:68,0:52:67.22:0,67,1293	0/0:46,0:46:99:0,126,4544	0/0:57,0:55:99:0,131,4769	0/0:9,0:9:24.08:0,24,869	0/0:52,0:52:99:0,147,5201	0/0:48,0:48:99:0,137,4651	0/0:57,0:57:99:0,160,5760	1/1:18,3:20:3:35,3,0	1/1:15,4:19:8.55:85,9,0	0/0:35,0:35:89.37:0,89,3257	0/0:40,0:40:99:0,117,4400	0/0:40,0:22:31.33:0,31,463	0/0:40,0:40:5.14:0,5,73	1/1:47,0:36:14.20:161,14,0	0/0:24,0:24:1.12:0,1,3	0/0:18,0:18:42.14:0,42,1432	0/0:64,0:64:99:0,163,5929	0/0:28,0:28:72.25:0,72,2447	0/1:28,4:28:99:254,0,745	0/0:14,0:14:6.89:0,7,206	0/1:8,0:7:7.82:8,0,144
chr10	103715933	.	GCA	G	153.05	PASS	AB=0.982;AC=10;AF=0.179;AN=56;BaseQRankSum=7.950;DP=968;FS=5.294;HRun=0;HaplotypeScore=180.1758;InbreedingCoeff=0.5684;MQ=47.26;MQ0=41;MQRankSum=-7.223;QD=1.24;ReadPosRankSum=-2.172;VQSLOD=1.9231;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,99,1905	0/0:17,0:17:45.13:0,45,807	0/0:34,0:3:9.03:0,9,175	0/0:47,1:5:13.86:0,14,216	0/0:20,0:19:0:0,0,1	0/0:24,0:23:64.46:0,64,1227	0/0:52,0:52:99:0,138,2690	0/0:62,0:46:66.46:0,66,821	0/0:48,0:48:99:0,135,2581	0/0:51,3:52:97.69:0,98,2665	0/0:10,0:10:27.09:0,27,518	0/0:53,0:53:99:0,160,3047	0/0:50,0:50:99:0,146,2721	0/0:57,0:57:99:0,165,3155	1/1:15,1:15:2.76:19,3,0	1/1:14,1:15:2.07:23,2,0	0/0:33,0:33:86.05:0,86,1808	0/0:41,0:41:99:0,123,2399	0/0:31,0:15:21.56:0,22,361	0/0:35,0:35:7.94:0,8,63	1/1:45,0:34:9.36:43,9,0	0/0:21,2:23:1.65:0,2,4	0/0:18,0:18:48.16:0,48,902	0/0:69,0:69:99:0,190,3595	0/0:28,0:28:74.06:0,74,1387	0/1:26,1:23:99:100,0,504	0/1:12,0:12:11.85:12,0,41	1/1:7,1:7:13.22:98,13,0
chr10	103715952	.	TGA	T	155.57	PASS	AB=0.958;AC=16;AF=0.286;AN=56;BaseQRankSum=8.373;DP=905;FS=6.266;HRun=0;HaplotypeScore=180.6900;InbreedingCoeff=0.4219;MQ=50.18;MQ0=32;MQRankSum=-7.371;QD=0.70;ReadPosRankSum=-3.118;VQSLOD=1.7434;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,111,1913	0/0:13,0:13:33.09:0,33,570	0/1:32,0:3:8.97:19,0,9	0/0:35,0:4:2.14:0,2,57	0/1:19,0:18:0:0,0,1	0/0:32,0:32:67.19:0,67,1432	0/0:53,0:53:99:0,133,2215	0/0:29,0:21:18.24:0,18,306	0/0:52,0:52:99:0,151,2661	0/0:52,0:52:99:0,143,2320	0/0:13,0:13:36.12:0,36,672	0/0:56,0:56:99:0,168,2876	0/0:47,0:47:99:0,135,2332	0/0:60,1:61:99:0,132,2778	1/1:17,0:16:2.92:18,3,0	1/1:14,2:16:0.07:25,0,0	0/0:39,0:39:99:0,99,1926	0/0:43,0:43:99:0,104,2091	0/1:18,0:8:8.43:8,0,54	1/1:30,0:30:0.68:10,1,0	1/1:32,0:23:5.49:24,5,0	0/1:17,2:19:0.07:0,0,0	0/0:20,0:20:57.11:0,57,928	0/0:74,0:74:99:0,204,3506	0/0:22,0:22:63.06:0,63,1045	0/1:19,1:17:25.09:25,0,93	1/1:10,0:10:22.64:151,23,0	0/1:7,1:8:12.21:25,0,12
chr10	103715965	.	GCGC	G	339.25	PASS	AB=0.754;AC=13;AF=0.232;AN=56;BaseQRankSum=9.157;DP=872;FS=5.920;HRun=0;HaplotypeScore=188.6998;InbreedingCoeff=0.5013;MQ=52.30;MQ0=20;MQRankSum=-8.813;QD=2.74;ReadPosRankSum=1.150;VQSLOD=2.3214;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,123,2948	0/0:14,0:14:42.14:0,42,1001	0/0:35,0:7:20.65:0,21,347	0/0:41,0:10:24.02:0,24,457	0/0:8,6:13:0.47:0,0,2	0/0:34,0:34:90.27:0,90,2125	0/0:53,0:53:99:0,133,3251	0/1:15,1:15:13.47:13,0,51	0/0:55,0:56:99:0,162,3859	0/0:54,0:54:99:0,159,3579	0/0:19,0:19:54.18:0,54,1217	0/0:57,0:57:99:0,172,4083	0/0:48,0:48:99:0,141,3300	0/0:62,0:62:99:0,174,3986	0/0:10,0:10:1.81:0,2,5	0/1:9,1:12:6.21:15,0,6	0/0:40,0:40:99:0,120,2841	0/0:45,1:46:99:0,117,3148	0/1:5,0:6:17.74:20,0,18	1/1:19,2:21:2.45:19,2,0	1/1:24,0:23:8.39:43,8,0	0/1:5,7:14:0.02:0,0,1	0/0:25,0:25:75.26:0,75,1812	0/0:72,0:72:99:0,205,4967	0/0:21,0:21:60.21:0,60,1472	0/1:5,2:7:67.24:67,0,84	1/1:7,1:9:21.05:124,21,0	1/1:3,4:8:20.61:197,21,0
chr10	103715967	.	GCA	G	852.97	PASS	AB=0.963;AC=19;AF=0.339;AN=56;BaseQRankSum=11.372;DP=863;FS=4.478;HRun=0;HaplotypeScore=171.0750;InbreedingCoeff=0.7826;MQ=52.57;MQ0=17;MQRankSum=-10.762;QD=5.92;ReadPosRankSum=-0.989;VQSLOD=3.1772;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,125,2282	0/0:14,0:14:42.01:0,42,755	0/0:37,1:8:18.11:0,18,254	0/0:37,0:10:21.92:0,22,318	0/1:14,0:14:0:0,0,1	0/0:30,0:30:84.29:0,84,1662	0/0:52,0:52:99:0,136,2527	1/1:16,2:15:13.34:99,13,0	0/0:55,0:55:99:0,144,2945	0/0:57,0:57:99:0,151,2760	0/0:19,0:19:51.16:0,51,922	0/0:56,0:56:99:0,166,3180	0/0:48,0:48:99:0,143,2492	0/0:58,0:58:99:0,146,3037	1/1:9,0:9:2.93:18,3,0	1/1:12,0:12:4.21:23,4,0	0/0:40,0:40:99:0,120,2234	0/0:45,0:45:74.22:0,74,2361	1/1:4,2:6:11.95:136,12,0	1/1:6,15:21:10.10:90,10,0	1/1:20,5:22:8.37:41,8,0	0/1:14,0:14:0.08:0,0,0	0/0:26,0:26:78.25:0,78,1434	0/0:74,1:75:99:0,213,4013	0/0:21,0:21:60.21:0,60,1190	0/1:7,1:7:43.92:106,0,44	1/1:3,6:9:24.01:333,24,0	1/1:8,0:8:23.69:193,24,0
chr10	103715976	.	T	TGA	332.33	PASS	AB=0.964;AC=13;AF=0.232;AN=56;BaseQRankSum=8.794;DP=937;FS=5.841;HRun=0;HaplotypeScore=206.9530;InbreedingCoeff=0.4162;MQ=53.82;MQ0=11;MQRankSum=-4.629;QD=1.70;ReadPosRankSum=-6.099;VQSLOD=0.2479;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,120,1726	0/0:15,0:15:45.14:0,45,666	0/0:42,0:15:35.97:0,36,492	0/0:42,0:17:25.64:0,26,359	1/1:16,4:20:3.59:26,4,0	0/0:36,0:36:93.12:0,93,1331	0/0:49,0:49:99:0,126,1871	0/1:32,0:29:18.89:19,0,32	0/0:51,0:51:99:0,141,2094	0/0:59,0:58:99:0,110,2083	0/0:19,0:19:54.17:0,54,803	0/0:57,0:57:99:0,168,2413	0/0:46,0:46:99:0,132,1941	0/0:52,0:52:99:0,152,2184	1/1:9,6:15:8.79:60,9,0	1/1:4,10:14:5.97:65,6,0	0/0:40,0:40:99:0,120,1806	0/0:44,0:44:99:0,117,1705	0/0:10,0:10:14.13:0,14,68	0/1:24,0:24:11.38:18,0,11	0/1:48,0:44:2.44:2,0,6	1/1:16,3:19:2.82:25,3,0	0/0:28,0:28:78.72:0,79,1171	0/0:75,0:75:99:0,171,2961	0/0:21,0:21:60.18:0,60,877	0/1:14,0:13:62.81:188,0,63	0/0:10,0:10:17.99:0,18,60	0/1:7,2:9:80.97:81,0,108
chr10	103715978	.	TGA	T	973	PASS	AB=0.939;AC=19;AF=0.339;AN=56;BaseQRankSum=13.175;DP=946;FS=3.456;HRun=0;HaplotypeScore=200.7542;InbreedingCoeff=0.6482;MQ=54.29;MQ0=11;MQRankSum=-7.991;QD=4.34;ReadPosRankSum=-5.669;VQSLOD=1.5952;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,100,1903	0/0:15,0:15:45.14:0,45,803	0/0:42,0:16:37.16:0,37,580	0/0:46,0:18:28.38:0,28,401	1/1:21,0:21:5.44:50,5,0	0/0:36,0:36:93.20:0,93,1527	0/0:48,0:48:99:0,122,2226	1/1:34,0:31:8.59:233,9,0	0/0:50,0:50:99:0,144,2562	0/0:57,0:56:99:0,121,2556	0/0:19,0:19:54.14:0,54,937	0/0:56,0:56:99:0,165,2861	0/0:44,0:44:99:0,126,2374	0/0:53,0:53:99:0,150,2602	1/1:16,0:16:9.38:64,9,0	0/1:12,2:14:12.13:25,0,12	0/0:41,0:41:99:0,123,2177	0/0:43,0:43:99:0,111,1905	0/1:11,0:11:31.05:51,0,31	1/1:23,0:23:11.64:95,12,0	1/1:51,0:46:5.62:142,6,0	1/1:18,2:19:3.80:27,4,0	0/0:29,0:29:81.10:0,81,1493	0/0:76,0:76:99:0,196,3614	0/0:21,0:21:57.11:0,57,963	0/1:15,1:15:60.79:161,0,61	1/1:9,0:9:6.64:176,7,0	1/1:8,1:9:8.47:135,8,0
chr10	103715980	.	A	AGT	1721.27	PASS	AB=0.950;AC=20;AF=0.357;AN=56;BaseQRankSum=9.753;DP=948;FS=29.128;HRun=0;HaplotypeScore=200.1096;InbreedingCoeff=0.7319;MQ=54.16;MQ0=10;MQRankSum=-8.386;QD=7.48;ReadPosRankSum=-7.560;VQSLOD=0.5429;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,99,1230	0/0:15,0:15:36.10:0,36,448	0/0:45,0:19:35.54:0,36,445	0/0:48,0:19:9.04:0,9,311	1/1:21,0:22:3.95:27,4,0	0/0:34,0:34:81.13:0,81,1040	0/0:48,0:48:99:0,114,1440	1/1:32,4:33:12.29:546,12,0	0/0:50,0:50:99:0,126,1578	0/0:55,0:54:99:0,100,1665	0/0:19,0:19:48.15:0,48,604	0/0:54,0:54:99:0,145,1864	0/0:45,0:45:99:0,129,1623	0/0:51,0:51:99:0,135,1708	1/1:17,0:17:3.78:27,4,0	1/1:14,0:15:3.89:29,4,0	0/0:42,0:42:99:0,111,1394	0/0:43,0:43:99:0,100,1256	1/1:6,9:15:16.97:316,17,0	1/1:22,1:23:7.93:143,8,0	1/1:40,6:42:33.05:492,33,0	1/1:21,0:20:1.76:5,2,0	0/0:31,0:31:84.07:0,84,1049	0/0:71,1:72:85.58:0,86,2180	0/0:21,0:21:48.16:0,48,617	0/1:16,0:15:21.21:95,0,21	0/1:8,1:9:5.77:121,0,6	1/1:9,0:9:19.31:110,19,0
chr10	103716390	.	TACATAGTGAG	T	5336.42	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.465;DP=598;FS=5.021;HRun=0;HaplotypeScore=184.8051;InbreedingCoeff=0.9848;MQ=68.90;MQ0=1;MQRankSum=-11.005;QD=58.00;ReadPosRankSum=1.327;VQSLOD=4.6266;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:84.29:0,84,4407	0/0:7,0:7:21.07:0,21,1017	0/0:14,0:14:30.10:0,30,1163	0/0:12,0:10:23.91:0,24,959	0/0:24,0:24:69.22:0,69,3442	0/0:20,0:20:60.21:0,60,3152	0/0:30,0:30:78.25:0,78,3946	1/1:10,16:26:42.14:1268,42,0	0/0:25,0:25:72.25:0,72,3746	0/0:26,0:26:63.22:0,63,3131	0/0:17,0:17:48.16:0,48,2449	0/0:26,0:26:72.25:0,72,3567	0/0:31,0:31:90.31:0,90,4556	0/0:22,0:22:63.22:0,63,3125	0/0:38,0:38:99:0,114,5538	0/0:27,0:27:81.27:0,81,4048	0/0:13,0:13:39.13:0,39,1958	0/0:16,0:16:45.15:0,45,2309	1/1:6,6:12:15.05:490,15,0	1/1:1,16:17:42.14:1366,42,0	1/1:4,9:13:16.30:451,16,0	0/0:24,0:24:66.20:0,66,3184	0/0:18,0:18:51.16:0,51,2499	0/0:19,0:19:51.18:0,51,2686	0/0:32,0:32:87.30:0,87,4362	0/0:25,0:25:63.22:0,63,3253	1/1:4,20:23:54.19:1762,54,0	0/0:6,0:6:12.04:0,12,632
chr10	103717291	.	TG	T	2489.38	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.883;DP=589;FS=0.414;HRun=8;HaplotypeScore=59.2218;InbreedingCoeff=0.9925;MQ=77.00;MQ0=0;MQRankSum=-1.877;QD=21.46;ReadPosRankSum=-1.023;VQSLOD=3.3726;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:87.26:0,87,1039	0/0:8,0:8:24.06:0,24,279	0/0:14,0:14:12.22:0,12,399	0/0:15,0:15:36.02:0,36,381	0/0:18,0:18:51.12:0,51,582	0/0:22,0:22:63.19:0,63,761	0/0:16,0:16:48.15:0,48,579	1/1:4,28:32:84.13:811,84,0	0/0:26,0:26:78.17:0,78,899	0/0:21,0:21:48.14:0,48,571	0/0:11,0:11:33.08:0,33,378	0/0:28,0:28:78.23:0,78,931	0/0:17,0:17:36.11:0,36,435	0/0:26,0:26:75.23:0,75,899	0/0:19,0:19:54.16:0,54,642	0/0:17,0:16:48.13:0,48,567	0/0:31,0:31:84.25:0,84,1005	0/0:25,0:25:66.19:0,66,787	1/1:3,12:15:36.05:348,36,0	1/1:4,17:21:48.06:464,48,0	1/1:6,23:29:57.09:550,57,0	0/0:23,0:23:63.15:0,63,726	0/0:15,0:15:36.07:0,36,399	0/0:33,0:33:84.25:0,84,1004	0/0:20,0:20:57.17:0,57,679	0/0:19,0:19:50.19:0,50,611	1/1:1,18:19:51.08:493,51,0	0/0:13,0:13:39.11:0,39,460
chr10	103718108	.	GGC	G	1501.18	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=8.514;DP=702;FS=3.062;HRun=0;HaplotypeScore=138.1496;InbreedingCoeff=0.7697;MQ=85.98;MQ0=13;MQRankSum=-0.084;QD=9.44;ReadPosRankSum=0.161;VQSLOD=3.3032;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,108,1472	0/0:7,0:7:20.96:0,21,285	0/0:58,0:35:56.02:0,56,744	0/0:93,0:56:46.71:0,47,853	0/0:20,0:19:29.58:0,30,211	0/0:24,0:24:32.92:0,33,777	0/0:15,0:15:45:0,45,626	1/1:4,20:24:40.70:430,41,0	0/0:23,0:23:39.36:0,39,919	0/0:25,0:25:63.07:0,63,861	0/0:16,0:16:44.98:0,45,613	0/0:15,0:15:44.86:0,45,521	0/0:22,0:21:37.06:0,37,709	0/0:13,0:13:36:0,36,537	0/1:22,0:22:30.06:30,0,210	0/0:20,0:20:41.95:0,42,505	0/0:23,0:23:65.89:0,66,913	0/0:17,0:17:47.90:0,48,715	1/1:23,0:22:41.25:398,41,0	1/1:23,1:24:21.06:333,21,0	1/1:24,0:24:12.28:203,12,0	0/0:24,0:24:37.05:0,37,275	0/0:10,0:10:17.28:0,17,349	0/0:33,0:33:81.11:0,81,1269	0/0:25,0:25:57.34:0,57,964	0/1:21,0:20:79.12:79,0,289	1/1:20,0:20:11.51:206,12,0	0/0:14,0:14:32.74:0,33,258
chr10	103718109	.	G	GCT	1038.59	PASS	AB=0.864;AC=8;AF=0.143;AN=56;BaseQRankSum=8.119;DP=713;FS=0.000;HRun=0;HaplotypeScore=147.0652;InbreedingCoeff=0.6612;MQ=84.81;MQ0=15;MQRankSum=-3.424;QD=9.03;ReadPosRankSum=0.116;VQSLOD=3.2997;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,102,1443	0/0:7,0:7:18.06:0,18,270	0/0:61,0:35:61.97:0,62,903	0/0:96,0:56:46.11:0,46,1105	0/0:20,0:19:29.87:0,30,425	0/0:24,0:24:69.10:0,69,919	0/0:17,0:17:43.07:0,43,682	0/1:25,0:24:8.11:84,0,8	0/0:25,0:25:69.23:0,69,1028	0/0:25,0:25:53.54:0,54,911	0/0:18,0:18:45.15:0,45,668	0/0:16,0:16:45.15:0,45,665	0/0:22,0:21:60.18:0,60,843	0/0:13,0:13:36.10:0,36,515	0/0:21,0:21:33.82:0,34,345	0/0:19,0:19:41.35:0,41,576	0/0:25,0:25:66.14:0,66,932	0/0:19,0:19:48.12:0,48,678	1/1:18,4:21:15.73:218,16,0	0/1:15,9:24:5.72:305,0,6	1/1:17,7:24:0.19:243,0,0	0/0:23,0:23:24.70:0,25,411	0/0:10,0:10:30.07:0,30,425	0/0:33,0:33:81.27:0,81,1208	0/0:25,0:25:69.23:0,69,1014	0/0:19,0:18:52.96:0,53,623	1/1:13,7:20:10.84:327,11,0	0/0:14,0:14:32.59:0,33,404
chr10	103718134	.	C	CTCTATCTCTA	4877.66	PASS	AB=0.901;AC=13;AF=0.232;AN=56;BaseQRankSum=-1.788;DP=770;FS=7.274;HRun=0;HaplotypeScore=234.8990;InbreedingCoeff=0.1663;MQ=67.68;MQ0=30;MQRankSum=-3.254;QD=17.17;ReadPosRankSum=-1.782;VQSLOD=2.8169;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,111,2456	0/0:7,0:7:21.07:0,21,511	0/0:55,0:18:11.05:0,11,240	0/0:92,0:37:58.54:0,59,606	0/0:3,20:30:1.77:0,2,5	0/1:21,0:21:15.87:16,0,850	0/0:18,0:18:38.73:0,39,731	0/1:38,0:35:88.64:345,0,89	0/0:23,0:23:31.38:0,31,1494	0/0:18,0:18:51.09:0,51,877	0/0:18,0:18:45.12:0,45,1074	0/0:15,0:15:42.12:0,42,904	0/0:22,0:21:58.08:0,58,1335	0/0:16,0:16:45.11:0,45,988	0/1:3,14:26:0.58:873,0,1	0/1:24,0:24:99:261,0,119	0/0:27,0:27:63.20:0,63,1513	0/0:20,0:20:48.11:0,48,996	0/1:30,0:28:1.37:623,0,1	0/1:27,0:27:16.41:307,0,16	0/1:33,0:33:16.87:370,0,17	1/1:5,18:27:6.49:287,6,0	0/0:17,0:17:14.65:0,15,787	0/0:38,0:38:93.16:0,93,1866	0/0:23,0:23:63.21:0,63,1511	0/1:7,17:26:99:995,0,137	0/1:24,0:24:96.23:483,0,96	1/1:0,7:7:6.02:316,6,0
chr10	103718146	.	A	ATCTCTATCTCTA	4493.08	PASS	AB=0.997;AC=18;AF=0.321;AN=56;BaseQRankSum=0.548;DP=742;FS=4.120;HRun=0;HaplotypeScore=251.0442;InbreedingCoeff=0.6621;MQ=66.71;MQ0=25;MQRankSum=-4.072;QD=12.87;ReadPosRankSum=-4.444;VQSLOD=2.3892;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:87.25:0,87,2054	0/0:8,0:8:18.06:0,18,481	0/0:40,0:14:3.42:0,3,32	0/1:83,0:35:12.92:13,0,35	0/0:31,0:31:0.31:0,0,1	0/0:19,0:19:26.08:0,26,616	0/0:18,0:18:23.62:0,24,408	1/1:38,0:37:35.93:387,36,0	0/0:21,0:21:51.16:0,51,1291	0/0:13,0:13:24.06:0,24,429	0/0:17,0:17:39.12:0,39,958	0/0:16,0:16:39.11:0,39,816	0/0:22,0:21:48.16:0,48,1088	0/0:20,0:20:36.09:0,36,826	1/1:25,0:25:21.07:676,21,0	1/1:16,10:27:24.05:426,24,0	0/0:24,0:24:54.10:0,54,1284	0/0:20,0:20:30.09:0,30,633	1/1:33,0:30:51.11:665,51,0	0/1:28,0:28:3.02:365,0,3	1/1:33,0:33:26.30:387,26,0	1/1:29,0:29:6.49:220,6,0	0/0:17,0:17:37.91:0,38,794	0/0:35,0:35:63.13:0,63,1404	0/0:24,0:24:48.16:0,48,1195	0/1:22,0:21:99:604,0,145	0/1:21,0:21:2.03:504,0,2	1/1:8,0:8:6.02:247,6,0
chr10	103720928	.	A	ACTCTCTCT	1433.67	PASS	AB=0.903;AC=13;AF=0.232;AN=56;BaseQRankSum=6.222;DP=653;FS=19.637;HRun=0;HaplotypeScore=182.2100;InbreedingCoeff=0.7390;MQ=62.31;MQ0=10;MQRankSum=-3.372;QD=8.01;ReadPosRankSum=-5.724;VQSLOD=-0.6200;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:85.93:0,86,1531	0/0:13,0:13:33.09:0,33,562	0/0:16,0:9:18.03:0,18,246	0/0:36,0:18:19.58:0,20,457	1/1:23,0:23:9.15:95,9,0	0/0:22,0:22:66.14:0,66,1019	0/0:37,0:37:99:0,99,1797	0/1:38,0:38:49.52:50,0,1194	0/0:22,0:22:61.70:0,62,1340	0/0:28,0:28:83.71:0,84,1298	0/0:12,0:12:32.67:0,33,471	0/0:21,0:21:60.19:0,60,1181	0/0:19,0:19:54.17:0,54,1112	0/0:12,0:12:33.07:0,33,637	0/1:10,6:17:0.08:0,0,0	1/1:19,1:20:20.91:490,21,0	0/0:22,0:22:66.16:0,66,1339	0/0:31,0:31:93.25:0,93,1751	0/0:22,0:21:14.74:0,15,687	0/0:18,0:17:33.53:0,34,518	0/0:28,0:27:45.20:0,45,603	1/1:27,0:27:15.32:121,15,0	0/0:15,0:15:27.07:0,27,466	0/0:43,0:43:99:0,117,2206	0/0:18,0:18:39.04:0,39,677	1/1:25,0:24:24.38:344,24,0	0/1:16,0:15:99:352,0,328	1/1:13,0:12:13.98:157,14,0
chr10	103720930	.	TCA	T	1026.77	PASS	AB=0.991;AC=11;AF=0.196;AN=56;BaseQRankSum=1.754;DP=646;FS=11.355;HRun=0;HaplotypeScore=96.5434;InbreedingCoeff=0.3298;MQ=60.88;MQ0=12;MQRankSum=-0.685;QD=6.26;ReadPosRankSum=-3.303;VQSLOD=1.6007;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:83.85:0,84,882	0/0:12,0:12:24.53:0,25,347	0/0:13,0:6:17.80:0,18,169	0/0:36,0:18:28.24:0,28,299	1/1:23,0:23:24.99:325,25,0	0/0:23,0:23:65.48:0,65,650	0/0:33,0:33:53.09:0,53,948	0/0:38,0:38:41.26:0,41,675	0/1:22,0:22:14.72:15,0,592	0/0:31,0:30:49.36:0,49,771	0/0:12,0:12:32.48:0,32,316	0/1:20,1:21:26.17:26,0,513	0/0:20,0:20:51.15:0,51,647	0/0:12,0:12:26.89:0,27,340	0/1:16,0:16:13.36:13,0,36	1/1:20,0:20:6.71:114,7,0	0/0:22,2:24:28.30:0,28,808	0/0:32,0:32:68.42:0,68,1054	0/0:22,0:20:46.44:0,46,435	0/0:19,0:18:11.11:0,11,241	0/0:27,0:26:53.73:0,54,441	0/1:25,0:25:18.06:237,0,18	0/0:13,1:14:27.23:0,27,253	0/0:44,0:44:68.20:0,68,1262	0/0:18,0:18:38.94:0,39,406	0/1:24,0:23:34.04:287,0,34	0/0:16,0:15:21.62:0,22,190	1/1:13,0:12:0.36:161,0,0
chr10	103721543	.	GT	G	527.12	PASS	AB=0.811;AC=12;AF=0.214;AN=56;BaseQRankSum=5.026;DP=524;FS=4.607;HRun=16;HaplotypeScore=76.8023;InbreedingCoeff=-0.0248;MQ=68.97;MQ0=3;MQRankSum=0.059;QD=2.51;ReadPosRankSum=1.724;VQSLOD=-0.3744;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,1:23:8.63:0,9,159	0/0:7,0:7:11.91:0,12,93	0/0:30,0:17:0.90:0,1,90	0/0:14,0:7:8.36:0,8,64	0/0:27,4:33:21.46:0,21,365	0/0:16,2:18:23.76:0,24,283	0/1:8,1:9:0.15:0,0,98	0/1:16,13:31:0.87:126,0,1	0/0:11,1:15:15.42:0,15,199	0/1:17,2:19:15.36:15,0,91	0/0:20,2:23:2.77:0,3,227	0/0:14,0:14:26.90:0,27,215	0/0:8,0:8:1.51:0,2,91	0/0:17,1:21:6.34:0,6,183	0/1:14,2:16:3.17:3,0,182	0/0:13,1:14:5.93:0,6,152	0/1:17,2:19:1.46:1,0,173	0/0:17,0:20:23.65:0,24,176	0/1:22,9:29:31.46:135,0,31	0/1:11,12:24:17.13:141,0,17	1/1:4,4:8:11.25:67,11,0	0/1:12,1:17:5.36:5,0,197	0/1:9,2:12:9.30:9,0,126	0/0:15,3:21:9.29:0,9,251	0/0:19,2:23:7.44:0,7,233	0/0:19,1:21:14.78:0,15,219	0/1:11,13:24:31.70:156,0,32	0/0:9,0:9:17.95:0,18,144
chr10	103723071	.	TAC	T	1511.02	PASS	AB=0.944;AC=24;AF=0.462;AN=52;BaseQRankSum=4.126;DP=635;FS=1.307;HRun=0;HaplotypeScore=107.8114;InbreedingCoeff=-0.1644;MQ=59.81;MQ0=14;MQRankSum=0.215;QD=3.61;ReadPosRankSum=0.570;VQSLOD=2.6847;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:37:9.61:10,0,317	0/1:8,0:8:37.78:38,0,105	./.	./.	1/1:15,6:21:2.87:81,3,0	0/1:22,0:21:11.20:11,0,181	0/1:25,3:27:17.90:18,0,107	0/0:36,0:36:2.84:0,3,14	0/1:12,4:17:38.71:39,0,265	0/1:25,0:25:37.28:37,0,181	0/0:8,0:7:8.81:0,9,83	0/1:13,2:15:75.82:76,0,127	0/1:22,0:22:60.20:60,0,254	0/1:13,1:14:40.81:41,0,126	1/1:21,15:37:35.93:371,36,0	1/1:12,10:26:44.45:410,44,0	0/1:27,0:27:34.07:34,0,203	0/1:16,0:15:3.03:3,0,109	0/0:22,0:21:20.34:0,20,168	0/0:21,0:21:6.45:0,6,49	0/0:42,0:41:26.96:0,27,243	1/1:16,2:17:11.77:109,12,0	0/0:6,0:6:4.52:0,5,48	0/1:33,3:35:99:100,0,332	0/1:16,1:17:14.60:15,0,130	0/1:23,3:25:12.37:148,0,12	0/0:15,0:15:11.78:0,12,89	1/1:3,1:5:4.38:72,4,0
chr10	103723091	.	C	CAG	1576.08	PASS	AB=0.923;AC=11;AF=0.196;AN=56;BaseQRankSum=2.867;DP=761;FS=5.516;HRun=0;HaplotypeScore=132.5564;InbreedingCoeff=-0.1088;MQ=52.58;MQ0=30;MQRankSum=-0.944;QD=5.05;ReadPosRankSum=3.619;VQSLOD=2.7827;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:99:0,103,999	0/0:14,0:14:41.97:0,42,387	0/0:23,0:5:8.91:0,9,62	0/0:26,0:9:27.02:0,27,263	0/1:20,0:20:50.25:50,0,117	0/0:29,0:28:65.15:0,65,588	0/0:35,0:34:49.97:0,50,566	0/1:36,0:31:99:313,0,164	0/0:18,0:17:41.90:0,42,432	0/0:23,0:23:66.24:0,66,648	0/0:11,0:10:29.97:0,30,296	0/0:22,0:22:53.85:0,54,515	0/0:28,0:28:74.63:0,75,701	0/0:24,0:24:65.86:0,66,603	0/1:40,0:39:99:257,0,130	0/1:32,0:32:99:161,0,139	0/0:32,0:32:83.57:0,84,756	0/0:18,0:16:34.03:0,34,289	0/1:11,10:20:63.66:180,0,64	1/1:26,1:26:2.04:148,2,0	0/1:73,2:74:80.21:361,0,80	0/1:18,0:16:59.78:60,0,80	0/0:15,0:15:35.96:0,36,331	0/0:45,0:43:99:0,105,1035	0/0:20,0:20:35.93:0,36,326	0/1:26,0:25:99:147,0,170	0/1:8,7:17:44.44:44,0,78	0/0:16,0:16:2.44:0,2,217
chr10	103723646	.	TACACACACAC	T	1315.56	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=6.248;DP=617;FS=0.975;HRun=0;HaplotypeScore=180.4262;InbreedingCoeff=0.7873;MQ=60.04;MQ0=4;MQRankSum=-5.800;QD=11.64;ReadPosRankSum=-1.331;VQSLOD=2.1012;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:43.27:0,43,1664	0/0:6,0:7:9.03:0,9,359	./.	0/0:37,0:27:3.48:0,3,44	0/0:22,0:23:39.12:0,39,1246	0/0:23,0:25:47.98:0,48,1830	0/0:18,0:19:21.07:0,21,799	0/1:17,0:16:0.93:9,0,1	0/0:19,0:24:34.36:0,34,1417	0/0:26,0:25:39.09:0,39,1292	0/0:16,0:20:42.14:0,42,1682	0/0:21,0:22:39.13:0,39,1444	0/0:15,0:15:24.55:0,25,937	0/0:17,0:23:30.10:0,30,817	0/0:18,0:18:27.09:0,27,1103	0/0:24,0:26:42.06:0,42,1417	0/0:20,0:20:33.11:0,33,1491	0/0:21,0:22:36.37:0,36,1066	1/1:7,2:9:2.84:62,3,0	1/1:12,14:26:21.07:623,21,0	1/1:37,2:37:3.75:91,4,0	0/0:20,0:20:27.09:0,27,1112	0/0:25,0:25:35.98:0,36,1419	0/0:22,0:21:42.14:0,42,1595	0/0:19,0:19:30.06:0,30,1316	0/0:19,0:18:27.09:0,27,984	1/1:13,7:22:24.08:674,24,0	0/0:13,0:13:21.07:0,21,848
chr10	103726078	.	GGTGTGT	G	458.91	PASS	AC=14;AF=0.292;AN=48;BaseQRankSum=3.484;DP=432;FS=1.162;HRun=0;HaplotypeScore=85.9846;InbreedingCoeff=0.6302;MQ=65.82;MQ0=14;MQRankSum=-1.360;QD=4.41;ReadPosRankSum=1.562;VQSLOD=1.7032;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:17.98:0,18,206	0/0:2,0:2:3.01:0,3,96	./.	./.	1/1:7,1:8:3.01:60,3,0	0/0:10,0:9:9.03:0,9,231	0/0:21,0:19:15.05:0,15,456	0/0:24,0:23:0:0,0,0	0/0:10,0:13:21.07:0,21,342	0/0:10,0:9:6.02:0,6,153	0/0:4,0:4:3.01:0,3,90	0/0:23,0:23:30.56:0,31,665	0/0:12,0:10:12.02:0,12,176	0/0:18,0:17:12.04:0,12,300	1/1:16,4:20:6.02:120,6,0	1/1:16,2:18:0.63:56,1,0	0/0:19,0:22:12.77:0,13,542	0/0:21,0:27:15.03:0,15,230	1/1:17,3:19:8.39:128,8,0	./.	1/1:14,0:15:6:67,6,0	1/1:7,2:8:6.91:111,7,0	0/0:5,0:6:8.13:0,8,287	0/0:25,0:25:39.13:0,39,967	0/0:12,0:14:21.07:0,21,417	0/0:13,0:12:0:0,0,1	1/1:13,1:14:3.01:60,3,0	./.
chr10	103728397	.	ATGTGCATGTGCG	A	2230.52	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=7.341;DP=602;FS=4.790;HRun=0;HaplotypeScore=229.6746;InbreedingCoeff=0.0013;MQ=71.46;MQ0=4;MQRankSum=-3.165;QD=11.99;ReadPosRankSum=-1.367;VQSLOD=2.3570;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:84.07:0,84,2162	0/0:7,0:7:21.02:0,21,601	0/0:25,0:21:42.68:0,43,463	0/0:28,0:21:36.30:0,36,489	0/1:22,0:22:52.53:53,0,82	0/0:21,0:21:51.03:0,51,1029	0/0:23,0:23:60.03:0,60,997	1/1:18,6:24:59.49:475,59,0	0/0:17,0:17:48.11:0,48,1836	0/0:15,0:15:45.08:0,45,700	0/0:17,0:17:51.11:0,51,1744	0/0:22,0:22:57.04:0,57,1410	0/0:19,0:19:54.01:0,54,1454	0/0:23,0:23:60.16:0,60,2277	0/1:13,0:13:44.90:425,0,45	0/1:12,0:12:49.93:229,0,50	0/0:40,0:40:99:0,105,2917	0/0:26,0:26:69.16:0,69,2521	0/1:21,0:21:99:266,0,109	0/1:17,0:17:99:242,0,120	0/1:28,0:28:99:173,0,246	0/0:19,0:19:17.98:0,18,150	0/0:17,0:17:45.08:0,45,1374	0/0:33,0:33:81.14:0,81,3033	0/0:29,0:28:81.16:0,81,2918	0/1:16,0:16:38.02:38,0,181	0/1:21,0:21:99:239,0,520	0/1:12,0:12:8.95:246,0,9
chr10	103728412	.	TGCGTGTGCGTGTGCGTGTGCGTGTGC	T	3167.74	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=3.231;DP=547;FS=7.115;HRun=0;HaplotypeScore=348.3389;InbreedingCoeff=0.9146;MQ=59.00;MQ0=5;MQRankSum=-5.230;QD=40.61;ReadPosRankSum=0.656;VQSLOD=0.9433;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:76.74:0,77,5483	0/0:7,0:7:21.07:0,21,1678	0/0:16,0:12:27.50:0,27,528	0/0:21,0:14:39.04:0,39,588	1/1:1,15:20:3.95:216,4,0	0/0:21,0:21:50.85:0,51,2677	0/0:31,0:30:83.93:0,84,4860	0/0:26,0:26:72.22:0,72,1565	0/0:16,0:16:48.12:0,48,4012	0/0:14,0:14:36.12:0,36,1843	0/0:19,0:19:57.16:0,57,4222	0/0:21,0:21:57.15:0,57,4163	0/0:17,0:17:45.09:0,45,3439	0/0:21,0:21:56.55:0,57,5318	1/1:5,0:12:30.07:1039,30,0	1/1:0,8:10:12.04:664,12,0	0/0:38,0:38:99:0,104,8024	0/0:23,0:23:66.21:0,66,5762	0/0:14,0:14:42.01:0,42,1853	0/0:17,0:17:26.16:0,26,1307	0/0:25,0:25:27.05:0,27,1176	1/1:11,0:14:9:125,9,0	0/0:19,0:19:51.17:0,51,3756	0/0:30,0:30:84.23:0,84,7373	0/0:31,0:30:93.25:0,93,7704	1/1:11,0:12:5.10:701,5,0	0/0:14,0:14:32.97:0,33,2164	1/1:0,7:10:12.04:591,12,0
chr10	103728418	.	TGCGTGTGCGTGTGCGTGTGC	T	3076.02	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=7.639;DP=544;FS=5.192;HRun=0;HaplotypeScore=283.8759;InbreedingCoeff=0.8228;MQ=55.09;MQ0=7;MQRankSum=-5.964;QD=30.76;ReadPosRankSum=-1.167;VQSLOD=2.0744;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:60.64:0,61,4242	0/0:7,0:7:21.07:0,21,1239	0/0:13,0:9:23.28:0,23,282	0/1:20,0:11:0.73:1,0,273	1/1:17,3:20:3.89:149,4,0	0/0:20,0:20:47.88:0,48,1832	0/0:30,0:30:81.11:0,81,3589	0/0:26,0:26:44.24:0,44,646	0/0:16,0:16:48.12:0,48,3021	0/0:15,0:15:42.10:0,42,1398	0/0:17,0:17:51.15:0,51,3118	0/0:18,0:18:48.16:0,48,2975	0/0:14,0:14:42.10:0,42,2526	0/0:23,0:23:62.57:0,63,4206	1/1:6,5:11:24.07:1082,24,0	1/1:10,2:12:12.93:588,13,0	0/0:36,0:36:99:0,99,5937	0/0:24,0:24:69.22:0,69,4440	0/0:15,0:15:36.86:0,37,1115	0/0:19,0:19:28.11:0,28,827	0/0:25,0:25:1.13:0,1,713	1/1:9,3:12:3.01:50,3,0	0/0:20,0:20:51.11:0,51,2711	0/0:33,0:32:87.28:0,87,5886	0/0:29,0:28:84.25:0,84,5688	1/1:13,1:14:36.11:729,36,0	0/0:14,0:14:29.43:0,29,1465	1/1:8,3:11:15.05:646,15,0
chr10	103728424	.	TGC	T	185.19	PASS	AB=0.969;AC=13;AF=0.232;AN=56;BaseQRankSum=8.566;DP=556;FS=0.000;HRun=0;HaplotypeScore=125.6929;InbreedingCoeff=0.3761;MQ=53.43;MQ0=6;MQRankSum=-5.777;QD=1.22;ReadPosRankSum=0.676;VQSLOD=2.0984;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.23:0,90,1589	0/0:7,0:7:21.05:0,21,360	0/0:9,0:5:11.77:0,12,139	0/0:23,1:10:18.61:0,19,249	1/1:22,0:22:2.97:14,3,0	0/0:18,0:18:41.91:0,42,693	0/0:29,0:28:72.21:0,72,1282	0/1:18,4:22:22.56:23,0,353	0/0:16,0:16:45.14:0,45,828	0/0:16,0:16:45.12:0,45,707	0/0:18,0:18:51.14:0,51,900	0/0:16,0:16:48.13:0,48,836	0/0:16,0:16:42.02:0,42,707	0/0:23,0:23:63.22:0,63,1183	1/1:10,0:10:19.97:103,20,0	1/1:14,0:14:0.12:44,0,0	0/0:39,0:39:90.62:0,91,1938	0/0:26,0:26:72.21:0,72,1308	0/0:16,0:16:7.96:0,8,210	0/1:20,0:20:6.04:6,0,268	0/1:26,0:26:4.88:5,0,183	0/1:13,0:13:5.79:19,0,6	0/0:19,0:19:48.12:0,48,863	0/0:35,0:34:96.26:0,96,1675	0/0:31,0:30:93.15:0,93,1592	0/1:14,0:14:18.48:74,0,18	0/0:14,0:14:28.28:0,28,359	1/1:11,0:11:1.72:45,2,0
chr10	103728426	.	C	CGT	383.12	PASS	AB=0.902;AC=9;AF=0.161;AN=56;BaseQRankSum=7.406;DP=559;FS=2.661;HRun=0;HaplotypeScore=131.7802;InbreedingCoeff=0.1943;MQ=52.27;MQ0=6;MQRankSum=-2.529;QD=3.14;ReadPosRankSum=-4.024;VQSLOD=1.2377;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.26:0,84,1127	0/0:7,0:7:15.05:0,15,206	0/0:5,0:3:5.88:0,6,56	0/0:24,0:9:17.80:0,18,189	0/0:22,0:22:2.27:0,2,13	0/0:19,0:19:36.12:0,36,487	0/0:27,0:26:66.20:0,66,887	0/1:22,0:22:99:137,0,162	0/0:15,0:15:42.14:0,42,576	0/0:15,0:15:33.10:0,33,439	0/0:15,0:15:45.12:0,45,595	0/0:17,0:17:42.14:0,42,574	0/0:14,0:14:35.98:0,36,466	0/0:23,0:23:63.11:0,63,824	0/0:13,0:13:14.16:0,14,64	0/1:14,0:14:27.17:27,0,28	0/0:40,0:40:99:0,99,1394	0/0:26,0:26:69.20:0,69,923	0/1:13,8:21:89.25:138,0,89	0/1:16,6:22:4.69:122,0,5	0/0:25,2:27:12.92:0,13,75	1/1:12,0:12:2.73:20,3,0	0/0:20,0:20:45.14:0,45,599	0/0:33,0:32:87.29:0,87,1187	0/0:32,0:31:87.26:0,87,1158	1/1:16,0:16:3.30:44,3,0	0/1:15,0:15:28.50:29,0,90	0/0:11,0:11:2.87:0,3,39
chr10	103728430	.	TGC	T	918.97	PASS	AB=0.935;AC=19;AF=0.339;AN=56;BaseQRankSum=11.866;DP=574;FS=4.644;HRun=0;HaplotypeScore=127.7148;InbreedingCoeff=0.5550;MQ=51.77;MQ0=6;MQRankSum=-3.151;QD=4.40;ReadPosRankSum=-0.732;VQSLOD=2.3982;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:86.46:0,86,1428	0/0:7,0:7:18.05:0,18,312	0/1:13,0:7:2.48:2,0,89	0/0:23,0:7:17.91:0,18,244	1/1:20,2:22:2.97:14,3,0	0/0:20,0:20:41.95:0,42,729	0/0:29,0:28:72.23:0,72,1262	0/1:18,4:22:99:100,0,144	0/0:15,0:15:45.15:0,45,820	0/0:13,0:13:33.11:0,33,616	0/0:17,0:17:47.38:0,47,822	0/0:18,0:18:54.07:0,54,893	0/0:14,0:14:36.10:0,36,624	0/0:24,0:24:66.04:0,66,1071	1/1:13,1:14:22.99:125,23,0	1/1:12,2:14:14.45:79,14,0	0/0:42,0:42:84.05:0,84,1693	0/0:27,0:27:78.12:0,78,1293	0/1:22,1:23:99:151,0,137	1/1:20,1:21:8.27:121,8,0	0/1:25,2:27:40.61:147,0,41	1/1:12,0:12:5.93:40,6,0	0/0:20,0:20:51.09:0,51,856	0/0:35,0:34:91.10:0,91,1592	0/0:30,0:29:87.28:0,87,1549	1/1:11,4:15:20.11:179,20,0	0/1:14,1:15:69.26:69,0,93	1/1:10,1:11:14.42:79,14,0
chr10	103728436	.	TGC	T	1254.31	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=12.060;DP=590;FS=22.844;HRun=0;HaplotypeScore=123.1128;InbreedingCoeff=0.6486;MQ=52.85;MQ0=6;MQRankSum=-5.416;QD=5.86;ReadPosRankSum=1.444;VQSLOD=1.3896;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:18.49:0,18,1086	0/0:6,0:6:18:0,18,255	0/1:18,0:11:0.04:0,0,219	0/0:22,0:5:7.87:0,8,143	1/1:20,2:22:3.10:21,3,0	0/0:20,0:20:23.81:0,24,550	0/0:32,0:31:57.72:0,58,1106	1/1:25,0:25:17.27:193,17,0	0/0:18,0:18:39.09:0,39,742	0/0:12,0:12:32.08:0,32,433	0/0:18,0:18:44.40:0,44,674	0/0:20,0:20:20.85:0,21,731	0/0:15,0:15:21.75:0,22,458	0/0:22,0:22:47.41:0,47,927	1/1:13,1:14:23.93:197,24,0	1/1:12,2:14:17.76:127,18,0	0/0:39,0:39:29.10:0,29,1352	0/0:27,0:27:45.15:0,45,1024	0/1:26,0:25:26.73:236,0,27	1/1:21,0:21:7.60:126,8,0	0/1:28,0:28:43.77:125,0,44	1/1:9,0:9:8.94:85,9,0	0/0:22,0:22:38.86:0,39,669	0/0:37,0:36:27.33:0,27,1313	0/0:30,0:29:11.80:0,12,1143	1/1:8,4:12:21.05:171,21,0	0/1:14,0:14:48.46:48,0,89	1/1:10,1:11:14.94:121,15,0
chr10	103728438	.	CGT	C	434.74	PASS	AB=0.920;AC=20;AF=0.357;AN=56;BaseQRankSum=8.628;DP=589;FS=8.232;HRun=0;HaplotypeScore=123.2362;InbreedingCoeff=-0.1483;MQ=52.96;MQ0=7;MQRankSum=-0.791;QD=1.13;ReadPosRankSum=3.863;VQSLOD=1.7887;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,5:36:99:105,0,861	0/0:6,0:6:12.04:0,12,178	0/0:19,0:11:21.43:0,21,265	0/0:21,0:3:9.01:0,9,116	1/1:22,0:22:2.16:6,2,0	0/1:16,2:18:3.11:3,0,401	0/1:27,2:32:51.98:52,0,806	0/0:25,0:25:7.99:0,8,85	0/1:18,1:19:4.71:5,0,527	0/0:12,0:12:18.06:0,18,286	0/0:16,0:16:32.41:0,32,479	0/1:20,2:22:23.36:23,0,573	0/1:13,1:15:19.78:20,0,326	0/0:22,0:22:1.07:0,1,710	0/1:14,0:14:4.74:50,0,5	0/1:15,0:15:15.23:17,0,15	0/1:34,5:39:58.22:58,0,1043	0/1:23,3:26:10.01:10,0,793	0/0:26,0:25:13.96:0,14,227	0/0:20,0:20:17.82:0,18,147	0/1:28,0:28:25.07:25,0,139	1/1:7,0:7:0.83:16,1,0	0/0:21,2:23:12.41:0,12,656	0/1:31,7:37:91.51:92,0,1009	0/1:27,4:30:65.28:65,0,907	0/1:11,0:11:2.64:3,0,73	0/0:14,0:14:20.98:0,21,269	1/1:11,0:11:10.53:39,11,0
chr10	103728671	.	GTTGT	G	7237.64	PASS	AB=0.962;AC=23;AF=0.411;AN=56;BaseQRankSum=16.397;DP=651;FS=10.270;HRun=0;HaplotypeScore=127.7314;InbreedingCoeff=0.7874;MQ=69.36;MQ0=0;MQRankSum=-5.481;QD=27.21;ReadPosRankSum=-1.314;VQSLOD=3.9233;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,105,2481	0/0:12,0:12:33.11:0,33,777	0/0:32,0:30:48.14:0,48,1029	0/0:27,0:23:43.39:0,43,1005	1/1:1,19:20:51.17:808,51,0	0/0:18,0:18:42.14:0,42,1001	0/0:26,0:26:60.19:0,60,1368	1/1:19,0:19:21.06:322,21,0	0/1:17,1:18:10.18:10,0,770	0/0:27,0:27:66.23:0,66,1586	0/1:14,1:15:19.20:19,0,630	0/0:29,0:29:66.20:0,66,1515	0/0:27,0:27:60.21:0,60,1388	0/0:21,0:22:51.12:0,51,1116	1/1:8,15:23:33.07:513,33,0	1/1:6,17:23:51.10:769,51,0	0/0:21,0:21:54.19:0,54,1293	0/0:17,0:17:44.87:0,45,980	1/1:19,0:18:24.08:392,24,0	0/1:25,0:25:13.18:833,0,13	1/1:39,0:39:81.06:1217,81,0	1/1:3,10:13:27.09:444,27,0	0/0:17,0:17:27.08:0,27,546	0/0:43,0:43:99:0,99,2305	0/0:23,0:23:57.20:0,57,1366	1/1:5,16:21:48.16:789,48,0	1/1:21,0:21:48.16:786,48,0	1/1:3,7:10:21.07:335,21,0
chr10	103728674	.	GTTT	G	2869.94	PASS	AB=0.867;AC=12;AF=0.214;AN=56;BaseQRankSum=17.379;DP=659;FS=11.920;HRun=3;HaplotypeScore=129.7964;InbreedingCoeff=-0.0611;MQ=67.86;MQ0=0;MQRankSum=-5.829;QD=12.16;ReadPosRankSum=2.526;VQSLOD=-0.4582;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,2907	0/0:12,0:12:36.12:0,36,836	0/0:33,0:31:93.31:0,93,1798	0/0:27,0:23:66.19:0,66,1325	0/1:20,0:20:51.39:160,0,51	0/0:21,0:21:63.15:0,63,1260	0/0:25,0:25:75.25:0,75,1657	0/1:14,6:20:99:160,0,110	0/0:18,0:18:43.39:0,43,1044	0/0:29,0:29:87.27:0,87,1905	0/0:15,0:15:34.36:0,34,833	0/0:26,0:26:78.27:0,78,1771	0/0:27,0:27:81.24:0,81,1698	0/0:23,0:23:69.15:0,69,1392	0/1:22,0:22:93.78:94,0,174	0/1:24,0:24:86.75:144,0,87	0/0:23,0:23:69.18:0,69,1473	0/0:18,0:18:51.15:0,51,1133	0/1:11,8:18:25.17:291,0,25	0/1:8,18:26:59.26:575,0,59	0/1:14,26:40:26.31:783,0,26	0/1:13,0:13:69.89:94,0,70	0/0:17,0:17:48.07:0,48,861	0/0:43,0:43:99:0,129,2767	0/0:22,0:22:66.21:0,66,1506	0/1:22,0:22:89.41:169,0,89	1/1:5,14:19:20.74:496,21,0	0/1:11,0:11:59.82:60,0,82
chr10	103728678	.	GT	G	819.96	PASS	AB=0.663;AC=5;AF=0.089;AN=56;BaseQRankSum=17.274;DP=685;FS=8.602;HRun=3;HaplotypeScore=114.9071;InbreedingCoeff=-0.1155;MQ=67.01;MQ0=1;MQRankSum=-3.303;QD=6.21;ReadPosRankSum=4.264;VQSLOD=0.1461;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,1751	0/0:14,0:14:42.11:0,42,566	0/0:34,0:32:93.30:0,93,1292	0/0:29,0:25:72.21:0,72,977	0/0:21,0:21:4.84:0,5,143	0/0:19,0:19:57.19:0,57,819	0/0:26,0:26:75.23:0,75,1041	0/1:15,6:21:55.41:55,0,303	0/0:18,0:18:47.55:0,48,683	0/0:29,0:29:84.28:0,84,1201	0/0:17,0:17:44.52:0,45,603	0/0:28,0:28:84.28:0,84,1196	0/0:25,0:25:75.24:0,75,1049	0/0:24,0:24:69.20:0,69,951	0/0:22,0:22:11.29:0,11,216	0/0:24,0:24:12.38:0,12,219	0/0:26,0:26:72.24:0,72,1024	0/0:18,0:18:51.13:0,51,711	0/1:14,8:20:56.92:142,0,57	0/1:9,18:27:99:225,0,99	0/1:16,26:42:99:320,0,167	0/0:18,0:18:9.05:0,9,142	0/0:16,0:16:45.06:0,45,601	0/0:42,0:42:99:0,114,1615	0/0:22,0:22:66.22:0,66,945	0/0:26,0:26:9.75:0,10,218	0/1:6,14:20:35.59:195,0,36	0/0:11,0:11:5.32:0,5,61
chr10	103728951	.	A	AGGGTTGCTGT	29058.53	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-3.639;DP=705;FS=10.354;HRun=0;HaplotypeScore=201.5074;InbreedingCoeff=0.9952;MQ=86.10;MQ0=0;MQRankSum=-19.085;QD=117.17;ReadPosRankSum=-2.191;VQSLOD=3.9786;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,147,4496	0/0:12,0:12:36.10:0,36,1142	0/0:30,0:30:78.18:0,78,2425	0/0:26,0:26:69.61:0,70,1991	1/1:7,17:27:60.16:2670,60,0	0/0:23,0:23:66.23:0,66,2182	0/0:37,0:37:99:0,105,3190	1/1:12,13:27:75.23:3469,75,0	0/0:26,0:26:78.27:0,78,2623	0/0:32,0:32:93.30:0,93,2914	0/0:13,0:13:36.12:0,36,1199	0/0:27,0:27:81.26:0,81,2632	0/0:21,0:21:57.20:0,57,1882	0/0:35,0:35:99:0,99,3308	1/1:7,21:31:84.29:4165,84,0	1/1:7,19:28:75.26:3755,75,0	0/0:38,0:37:99:0,106,3283	0/0:14,0:14:42.14:0,42,1379	1/1:5,4:10:23.75:946,24,0	1/1:4,9:16:36.08:1351,36,0	1/1:9,11:24:48.16:1979,48,0	1/1:6,17:27:69.24:3065,69,0	0/0:17,0:17:51.16:0,51,1647	0/0:32,0:32:96.33:0,96,3148	0/0:25,0:25:75.22:0,75,2262	1/1:9,10:19:57.20:2875,57,0	1/1:10,17:35:87.30:4224,87,0	1/1:1,3:4:12.04:559,12,0
chr10	103729325	.	GGAAGGAAGGAAA	G	3785.96	PASS	AB=0.848;AC=14;AF=0.250;AN=56;BaseQRankSum=11.927;DP=656;FS=12.928;HRun=0;HaplotypeScore=222.1198;InbreedingCoeff=0.3321;MQ=54.04;MQ0=5;MQRankSum=-5.228;QD=16.90;ReadPosRankSum=-0.486;VQSLOD=1.4443;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:66.17:0,66,2353	0/0:12,0:11:33.07:0,33,1067	0/0:9,0:6:5.99:0,6,51	0/0:5,0:3:2.99:0,3,24	1/1:4,16:20:32.57:343,33,0	0/0:28,0:28:78.08:0,78,2183	0/0:33,0:33:84.56:0,85,1862	0/1:25,0:26:99:130,0,112	0/0:29,0:29:78:0,78,2301	0/0:22,0:22:66.20:0,66,2094	0/0:14,0:14:30.07:0,30,1031	0/0:31,0:30:75.18:0,75,2558	0/0:34,0:34:93.21:0,93,3393	0/0:33,0:33:84.19:0,84,3126	1/1:3,26:29:30.57:1007,31,0	0/1:6,22:28:59.83:498,0,60	0/0:29,0:29:38.91:0,39,1537	0/0:27,0:27:24.01:0,24,807	0/1:17,0:15:87.26:87,0,105	0/1:15,0:15:76.88:77,0,245	0/0:23,0:24:3.45:0,3,23	1/1:5,17:21:29.82:564,30,0	0/0:12,0:12:35.43:0,35,868	0/0:28,0:28:78.12:0,78,2400	0/0:26,0:26:51.13:0,51,2161	0/1:6,20:26:99:936,0,120	0/1:28,0:28:35.81:36,0,250	1/1:2,11:13:3.01:108,3,0
chr10	103729333	.	GGAAA	G	2640.91	PASS	AB=0.883;AC=18;AF=0.321;AN=56;BaseQRankSum=14.537;DP=651;FS=13.178;HRun=0;HaplotypeScore=129.1012;InbreedingCoeff=0.5998;MQ=54.20;MQ0=6;MQRankSum=-5.998;QD=11.14;ReadPosRankSum=1.037;VQSLOD=2.5977;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:80.37:0,80,1380	0/0:12,0:11:33.05:0,33,548	0/0:5,0:4:5.99:0,6,51	0/0:4,0:1:2.99:0,3,24	1/1:18,0:18:32.45:215,32,0	0/0:27,0:27:81.06:0,81,1185	0/0:38,0:37:97.94:0,98,1157	0/1:28,0:28:54.43:224,0,54	0/0:31,0:30:92.88:0,93,1401	0/0:24,0:24:55.25:0,55,1123	0/0:13,0:13:33.05:0,33,590	0/0:30,0:29:81.09:0,81,1385	0/0:36,0:36:99:0,102,1930	0/0:30,0:30:84.13:0,84,1588	1/1:27,0:27:30.02:321,30,0	0/1:23,0:23:58.15:132,0,58	0/0:28,0:28:46.46:0,46,893	0/0:29,0:28:22.75:0,23,324	1/1:8,12:18:2.11:395,2,0	1/1:0,17:17:35.49:275,35,0	0/1:3,21:24:3.12:12,0,3	1/1:19,0:18:29.10:233,29,0	0/0:14,0:13:38.38:0,38,395	0/0:29,0:29:86.90:0,87,1252	0/0:27,0:27:78.04:0,78,1215	0/1:24,0:24:28.18:384,0,28	1/1:0,25:25:32.76:604,33,0	1/1:12,0:12:3.01:34,3,0
chr10	103729337	.	A	AGAAG	499.94	PASS	AB=1.000;AC=12;AF=0.222;AN=54;BaseQRankSum=5.356;DP=639;FS=3.244;HRun=0;HaplotypeScore=132.7099;InbreedingCoeff=0.4209;MQ=54.23;MQ0=6;MQRankSum=-2.678;QD=2.79;ReadPosRankSum=-4.248;VQSLOD=1.2569;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:68.48:0,68,989	0/0:12,0:11:18.05:0,18,259	./.	0/0:5,0:1:3.01:0,3,32	0/1:16,0:16:5.76:61,0,6	0/0:27,0:27:30.09:0,30,439	0/0:36,0:35:41.99:0,42,538	1/1:23,0:23:15.69:104,16,0	0/0:31,0:30:60.11:0,60,859	0/0:25,0:25:46.70:0,47,684	0/0:10,0:10:24.06:0,24,349	0/0:28,0:27:57.18:0,57,848	0/0:34,0:34:75.24:0,75,1140	0/0:30,0:30:57.16:0,57,842	0/0:26,0:26:11.83:0,12,150	0/0:24,0:24:12.60:0,13,117	0/0:28,0:28:42.03:0,42,613	1/1:11,17:28:6.02:142,6,0	0/1:21,0:19:54.43:74,0,54	1/1:17,0:17:11.63:72,12,0	1/1:24,0:24:0.89:2,1,0	0/0:18,0:17:5.43:0,5,59	0/0:14,0:13:9.03:0,9,139	0/0:32,0:32:51.11:0,51,696	0/0:28,0:28:48.14:0,48,709	0/1:23,0:23:75.37:96,0,75	0/1:26,0:26:58.38:99,0,58	0/0:11,0:11:2.04:0,2,6
chr10	103730205	.	G	GA	2319.24	PASS	AB=0.914;AC=11;AF=0.196;AN=56;BaseQRankSum=-9.362;DP=676;FS=0.000;HRun=9;HaplotypeScore=68.5938;InbreedingCoeff=0.8845;MQ=62.87;MQ0=6;MQRankSum=0.285;QD=15.36;ReadPosRankSum=-1.604;VQSLOD=3.4637;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,1144	0/0:10,0:10:20.99:0,21,182	0/0:19,0:11:10.42:0,10,113	0/0:13,0:6:17.59:0,18,140	0/0:23,0:22:53.94:0,54,461	0/0:19,0:19:47.98:0,48,417	0/0:30,0:31:79.86:0,80,670	1/1:8,26:32:66.16:721,66,0	0/0:22,0:22:59.98:0,60,521	0/0:25,0:24:65.90:0,66,564	0/0:18,0:18:44.98:0,45,388	0/0:28,0:28:71.94:0,72,617	0/0:24,0:24:53.95:0,54,468	0/0:27,0:27:71.94:0,72,613	0/0:29,0:30:83:0,83,703	0/0:17,0:17:44.97:0,45,387	0/0:39,0:40:97.98:0,98,838	0/0:35,0:34:79.52:0,80,755	1/1:7,18:24:31.08:556,31,0	1/1:3,15:18:16.06:394,16,0	1/1:4,12:16:26.76:298,27,0	0/0:21,0:21:56.98:0,57,493	0/0:19,0:19:44.97:0,45,390	0/1:29,3:32:7.56:8,0,609	0/0:22,0:22:59.98:0,60,520	0/0:29,0:28:80.91:0,81,694	1/1:5,20:26:27.93:519,28,0	0/0:6,0:6:14.99:0,15,129
chr10	103730554	.	GGAAAAAA	G	3096.32	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=4.379;DP=345;FS=2.664;HRun=0;HaplotypeScore=77.1204;InbreedingCoeff=0.8648;MQ=45.86;MQ0=14;MQRankSum=-5.502;QD=30.06;ReadPosRankSum=2.400;VQSLOD=2.7957;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:27:32.61:0,33,1084	0/0:2,0:2:6.02:0,6,200	0/0:20,0:4:12.04:0,12,263	0/0:15,0:4:12.04:0,12,265	1/1:3,7:10:18.06:439,18,0	0/0:13,0:13:21.06:0,21,761	0/0:9,0:9:18:0,18,447	1/1:14,0:14:26.85:319,27,0	0/0:14,0:14:27.06:0,27,700	0/0:12,0:11:21.06:0,21,623	0/0:7,0:7:12.03:0,12,367	0/0:16,0:16:36.06:0,36,930	0/0:11,0:11:18.06:0,18,584	0/0:11,0:11:15.03:0,15,511	1/1:8,6:13:30.06:521,30,0	1/1:6,3:9:15.04:317,15,0	0/0:25,0:24:39.08:0,39,1023	0/0:21,0:18:30.05:0,30,664	0/1:8,0:7:57.88:101,0,58	1/1:5,0:5:15:161,15,0	1/1:8,0:8:11.81:124,12,0	1/1:2,7:9:21.02:336,21,0	0/0:6,0:6:18.05:0,18,457	0/0:20,0:20:34.32:0,34,902	0/0:9,0:9:15.04:0,15,474	1/1:4,3:6:9.03:219,9,0	1/1:8,1:7:17.63:216,18,0	1/1:5,5:10:30.05:559,30,0
chr10	103730556	.	AAAAAAG	A	2953.51	PASS	AB=0.727;AC=21;AF=0.375;AN=56;BaseQRankSum=4.109;DP=374;FS=11.795;HRun=0;HaplotypeScore=78.9400;InbreedingCoeff=0.8841;MQ=45.53;MQ0=15;MQRankSum=-5.138;QD=29.54;ReadPosRankSum=4.102;VQSLOD=1.9133;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:28:35.74:0,36,1067	0/0:3,0:3:9.03:0,9,258	0/0:23,0:4:12.04:0,12,228	0/0:18,0:5:15.05:0,15,282	1/1:10,0:10:18.06:291,18,0	0/0:15,0:15:24.07:0,24,757	0/0:10,0:10:20.96:0,21,445	1/1:7,6:13:30:475,30,0	0/0:16,0:16:33.01:0,33,698	0/0:17,0:15:39.08:0,39,961	0/0:8,0:8:18.05:0,18,416	0/0:16,0:16:39.07:0,39,909	0/0:12,0:12:30.10:0,30,766	0/0:12,0:12:21.05:0,21,605	1/1:14,0:13:30.05:373,30,0	1/1:8,0:8:15.04:218,15,0	0/0:28,0:27:48.07:0,48,1082	0/0:24,0:21:36.07:0,36,676	0/1:5,3:7:54.40:245,0,54	1/1:1,4:5:15.01:289,15,0	1/1:4,3:7:12.03:185,12,0	1/1:9,0:9:19.18:197,19,0	0/0:6,0:6:18.05:0,18,403	0/0:22,0:22:37.33:0,37,811	0/0:13,0:13:27.08:0,27,671	1/1:6,1:6:9.03:146,9,0	1/1:6,3:8:24.02:363,24,0	1/1:10,0:10:30.03:386,30,0
chr10	103730577	.	CAAAA	C	1148.68	PASS	AB=0.711;AC=18;AF=0.321;AN=56;BaseQRankSum=7.498;DP=440;FS=1.148;HRun=16;HaplotypeScore=94.9364;InbreedingCoeff=0.5635;MQ=50.11;MQ0=20;MQRankSum=-6.982;QD=7.00;ReadPosRankSum=-2.861;VQSLOD=-0.7314;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:35:50.83:0,51,870	0/0:2,0:4:12.04:0,12,229	0/0:39,0:10:14.89:0,15,160	0/1:32,0:11:0.63:1,0,172	0/1:8,0:12:1.53:2,0,28	0/0:16,0:16:30.07:0,30,476	0/0:13,0:12:30.10:0,30,553	1/1:8,8:17:24.77:299,25,0	0/0:11,0:13:21.04:0,21,328	0/0:15,0:16:35.97:0,36,644	0/0:7,0:8:18.06:0,18,347	0/0:11,0:11:21.07:0,21,344	0/0:14,0:14:33.11:0,33,614	0/0:10,0:9:18.06:0,18,251	1/1:7,0:12:4.67:12,5,0	0/1:2,0:7:4.56:5,0,9	0/0:22,0:22:39.09:0,39,691	0/0:21,0:22:36.05:0,36,607	1/1:4,5:12:21.65:246,22,0	1/1:3,10:13:20.76:276,21,0	1/1:3,2:4:2.94:39,3,0	0/1:5,1:12:7.46:43,0,7	0/0:9,0:9:18.05:0,18,305	0/0:20,0:23:34:0,34,555	0/0:11,0:13:29.96:0,30,421	0/1:6,2:15:23.95:43,0,24	1/1:5,9:15:31.14:358,31,0	0/1:5,0:8:2.71:3,0,15
chr10	103730923	.	T	TCA	799.72	PASS	AB=0.845;AC=8;AF=0.148;AN=54;BaseQRankSum=0.430;DP=520;FS=4.183;HRun=0;HaplotypeScore=83.7070;InbreedingCoeff=-0.0183;MQ=63.34;MQ0=10;MQRankSum=1.112;QD=5.30;ReadPosRankSum=-1.444;VQSLOD=2.5852;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:20.89:0,21,212	0/0:7,0:9:11.87:0,12,113	./.	0/1:27,0:13:0:0,0,0	0/0:12,0:14:15.04:0,15,165	0/0:16,0:20:32.40:0,32,278	0/0:10,0:12:17.71:0,18,160	0/1:19,0:19:11.27:48,0,11	0/0:21,0:21:15.51:0,16,166	0/0:14,0:14:18.05:0,18,198	0/1:15,1:16:24.01:24,0,177	0/0:15,0:16:20.88:0,21,213	0/0:13,0:13:5.85:0,6,47	0/0:18,0:20:47.77:0,48,479	0/0:22,0:23:32.92:0,33,344	0/0:18,0:21:38.57:0,39,363	0/0:23,0:25:44.95:0,45,477	0/0:32,0:33:49.88:0,50,526	0/1:14,1:18:8.13:39,0,8	0/1:14,6:20:43.28:204,0,43	0/1:16,15:31:8.97:291,0,9	0/0:10,0:10:11.87:0,12,113	0/0:13,0:12:15.01:0,15,153	0/0:28,0:30:65.84:0,66,689	0/0:13,0:13:15.03:0,15,157	0/0:13,0:14:20.86:0,21,196	0/1:5,6:11:39.02:287,0,39	0/1:6,1:7:33.04:33,0,87
chr10	103735320	.	G	GA	3588.68	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-11.554;DP=586;FS=5.802;HRun=7;HaplotypeScore=55.6539;InbreedingCoeff=0.9840;MQ=72.43;MQ0=0;MQRankSum=-2.626;QD=28.26;ReadPosRankSum=-1.936;VQSLOD=3.6455;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.09:0,57,548	0/0:8,0:8:17.99:0,18,166	0/0:22,0:20:31.95:0,32,330	0/0:19,0:19:38.48:0,38,346	0/0:28,0:28:78.12:0,78,753	0/0:11,0:11:27.04:0,27,260	0/0:13,0:13:39.06:0,39,377	1/1:1,30:32:81.24:966,81,0	0/0:20,0:20:54.08:0,54,521	0/0:31,0:31:78.11:0,78,753	0/0:26,0:26:66.10:0,66,637	0/0:16,0:16:48.05:0,48,456	0/0:24,0:24:63.09:0,63,607	0/0:22,0:22:51.03:0,51,487	0/0:26,0:26:72.11:0,72,695	0/0:16,0:16:45.07:0,45,435	0/0:22,0:22:63.07:0,63,600	0/0:25,0:25:63.10:0,63,608	1/1:4,15:19:44.97:522,45,0	1/1:4,23:27:40.24:759,40,0	1/1:1,14:15:33.10:399,33,0	0/0:19,0:19:48.07:0,48,463	0/0:12,0:12:33.05:0,33,319	0/0:15,0:15:29.57:0,30,364	0/0:27,0:27:66.10:0,66,637	0/0:28,0:28:72.11:0,72,695	1/1:1,33:34:78.23:942,78,0	0/0:6,0:6:9.01:0,9,87
chr10	103735694	.	A	AT	5463.32	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-15.482;DP=615;FS=7.311;HRun=1;HaplotypeScore=59.2339;InbreedingCoeff=0.9994;MQ=77.51;MQ0=0;MQRankSum=-2.034;QD=42.03;ReadPosRankSum=-2.660;VQSLOD=4.0606;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,1890	0/0:9,0:9:24.04:0,24,293	0/0:20,0:20:59.64:0,60,657	0/0:26,0:26:66.21:0,66,848	0/0:21,0:21:63.18:0,63,790	0/0:15,0:15:45.12:0,45,555	0/0:32,0:32:93.27:0,93,1178	1/1:0,39:39:99:1624,114,0	0/0:19,0:19:54.13:0,54,668	0/0:18,0:18:48.15:0,48,613	0/0:20,0:20:60.20:0,60,778	0/0:18,0:18:51.07:0,51,621	0/0:20,0:20:57.16:0,57,722	0/0:29,0:29:87.27:0,87,1116	0/0:14,0:14:42.14:0,42,545	0/0:21,0:21:63.20:0,63,805	0/0:24,0:24:72.21:0,72,917	0/0:15,0:15:42.10:0,42,527	1/1:0,24:24:72.24:1079,72,0	1/1:1,20:21:60.16:874,60,0	1/1:4,28:32:84.28:1258,84,0	0/0:16,0:16:39.08:0,39,476	0/0:20,0:20:60.20:0,60,778	0/0:26,0:26:78.24:0,78,996	0/0:23,0:23:69.22:0,69,883	0/0:19,0:19:57.16:0,57,701	1/1:0,14:14:42.14:629,42,0	0/0:10,0:10:30.05:0,30,370
chr10	103737102	.	GA	G	5161.74	PASS	AB=0.944;AC=23;AF=0.411;AN=56;BaseQRankSum=11.333;DP=635;FS=9.832;HRun=10;HaplotypeScore=67.6383;InbreedingCoeff=0.8985;MQ=80.01;MQ0=2;MQRankSum=2.215;QD=17.50;ReadPosRankSum=0.258;VQSLOD=5.0539;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.08:0,42,445	0/0:6,0:6:18.05:0,18,199	0/0:40,2:30:0.82:0,1,377	0/1:32,1:26:8.43:8,0,296	1/1:3,23:26:40.12:468,40,0	0/0:29,0:29:71.94:0,72,749	0/0:23,0:23:48.10:0,48,512	1/1:6,36:42:99:880,105,0	0/0:7,0:7:21:0,21,199	0/0:27,1:28:49.14:0,49,765	0/0:27,0:27:69.17:0,69,747	0/0:16,0:17:38.15:0,38,451	0/0:25,0:25:66.12:0,66,707	0/0:16,0:16:39.11:0,39,431	1/1:3,17:21:44.02:371,44,0	1/1:0,9:9:24:208,24,0	0/0:23,0:23:57.13:0,57,619	0/0:21,0:21:57.15:0,57,631	1/1:3,23:26:68.93:586,69,0	1/1:4,21:25:62.98:546,63,0	1/1:5,11:16:20.99:182,21,0	1/1:2,24:26:65.93:565,66,0	0/0:29,0:29:72.16:0,72,772	0/0:13,0:13:33.09:0,33,365	0/0:18,1:19:28.08:0,28,528	1/1:4,16:20:17.80:383,18,0	1/1:5,29:34:68.98:599,69,0	1/1:1,15:16:41.99:365,42,0
chr10	103737302	.	AGAGG	A	8156.65	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=13.606;DP=668;FS=1.968;HRun=0;HaplotypeScore=119.9247;InbreedingCoeff=0.9979;MQ=70.79;MQ0=9;MQRankSum=1.604;QD=33.29;ReadPosRankSum=1.674;VQSLOD=4.6000;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:40:99:0,102,2280	0/0:8,0:8:24.07:0,24,518	0/0:36,0:20:40.08:0,40,539	0/0:56,0:33:43.57:0,44,593	1/1:3,13:16:18.06:319,18,0	0/0:24,0:24:63.17:0,63,1473	0/0:29,0:29:81.21:0,81,1766	1/1:2,20:22:60.05:714,60,0	0/0:21,0:21:60.15:0,60,1363	0/0:24,0:24:66.15:0,66,1245	0/0:20,0:20:51.16:0,51,1094	0/0:19,0:19:51.15:0,51,1204	0/0:19,0:18:51.13:0,51,1122	0/0:19,0:19:54.14:0,54,1266	1/1:1,24:25:54.18:896,54,0	1/1:2,14:16:33.11:577,33,0	0/0:22,0:22:60.16:0,60,1329	0/0:16,0:16:45.10:0,45,1051	1/1:3,16:19:47.99:683,48,0	1/1:2,29:31:69.18:1178,69,0	1/1:4,23:26:33.11:593,33,0	1/1:5,23:28:51.17:818,51,0	0/0:27,0:26:75.09:0,75,1388	0/0:20,0:20:50.69:0,51,1078	0/0:21,0:21:63.17:0,63,1330	1/1:2,22:24:66.15:1002,66,0	1/1:4,23:27:57.19:1001,57,0	1/1:0,10:10:21.07:377,21,0
chr10	103737306	.	GGAGGGA	G	1035.33	PASS	AB=0.989;AC=16;AF=0.286;AN=56;BaseQRankSum=15.225;DP=665;FS=2.504;HRun=0;HaplotypeScore=168.0645;InbreedingCoeff=0.5695;MQ=73.21;MQ0=9;MQRankSum=1.526;QD=4.39;ReadPosRankSum=4.096;VQSLOD=2.7539;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,3155	0/0:8,0:8:24.07:0,24,708	0/0:38,0:21:45.43:0,45,770	0/0:65,0:39:20.29:0,20,781	0/1:13,1:14:12.22:12,0,24	0/0:24,0:24:69.23:0,69,2121	0/0:29,0:29:84.26:0,84,2450	1/1:21,0:21:34.15:295,34,0	0/0:23,0:23:66.17:0,66,1924	0/0:24,0:24:66.15:0,66,1593	0/0:18,0:18:51.16:0,51,1506	0/0:17,0:17:51.15:0,51,1611	0/0:20,0:19:54.14:0,54,1584	0/0:18,0:18:54.18:0,54,1724	0/1:25,0:25:2.70:100,0,3	0/1:17,0:17:20.27:20,0,78	0/0:23,0:23:63.17:0,63,1801	0/0:16,0:16:45.10:0,45,1405	1/1:20,0:20:17.74:147,18,0	0/1:29,0:29:0.21:51,0,0	0/1:26,0:25:13.27:29,0,13	1/1:24,3:27:23.89:257,24,0	0/0:27,0:26:71.27:0,71,1862	0/0:19,0:19:49.05:0,49,1491	0/0:21,0:21:63.19:0,63,1794	1/1:22,0:22:27.38:142,27,0	1/1:23,1:24:35.19:154,35,0	0/1:11,0:11:17.35:17,0,24
chr10	103737310	.	GGA	G	690.81	PASS	AB=0.979;AC=16;AF=0.286;AN=56;BaseQRankSum=15.366;DP=680;FS=3.769;HRun=0;HaplotypeScore=123.9525;InbreedingCoeff=0.0144;MQ=71.39;MQ0=10;MQRankSum=0.989;QD=1.97;ReadPosRankSum=4.559;VQSLOD=1.7649;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,2:41:25.84:0,26,1421	0/0:8,0:8:15.05:0,15,246	0/0:43,0:20:26.30:0,26,374	0/1:64,1:40:5.41:5,0,332	0/1:14,0:14:19.83:29,0,20	0/0:24,1:25:32.04:0,32,1016	0/0:28,0:28:75.26:0,75,1222	0/1:22,0:22:26.61:27,0,58	0/0:23,0:23:60.20:0,60,970	0/0:25,1:26:16.95:0,17,678	0/0:18,0:18:36.11:0,36,563	0/0:20,0:20:54.16:0,54,825	0/0:20,0:19:48.16:0,48,753	0/0:17,2:19:10.97:0,11,683	0/1:27,0:27:45.78:80,0,46	0/1:16,0:16:47.93:48,0,64	0/0:23,0:23:60.17:0,60,909	0/0:14,0:14:39.10:0,39,611	0/1:18,0:18:14.49:47,0,14	0/1:30,0:30:2.57:106,0,3	0/1:27,0:26:46.23:56,0,46	1/1:27,0:27:32.42:138,32,0	0/1:25,3:27:20.20:20,0,728	0/1:15,3:18:40.78:41,0,638	0/0:21,0:21:48.14:0,48,761	0/1:23,0:23:11.10:66,0,11	1/1:24,0:24:45.31:160,45,0	0/1:11,0:11:24.42:37,0,24
chr10	103737944	.	GTATATATA	G	3459.43	PASS	AB=0.857;AC=11;AF=0.212;AN=52;BaseQRankSum=3.015;DP=275;FS=0.632;HRun=0;HaplotypeScore=71.7167;InbreedingCoeff=0.6347;MQ=65.09;MQ0=3;MQRankSum=-6.107;QD=32.95;ReadPosRankSum=-2.529;VQSLOD=2.4162;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:17:21.07:0,21,813	0/0:3,0:3:3.01:0,3,126	0/0:5,0:3:0.47:0,0,1	0/0:11,0:4:2.50:0,2,9	./.	0/0:8,0:12:24.08:0,24,917	0/0:1,0:2:3.01:0,3,65	1/1:19,17:38:57.14:1106,57,0	0/0:8,0:9:15.05:0,15,571	0/0:4,0:4:3.01:0,3,71	0/0:9,0:9:15.05:0,15,600	0/0:3,0:5:9.03:0,9,279	0/0:3,0:3:6.02:0,6,167	0/1:5,0:6:0.67:1,0,140	0/0:4,0:7:7.84:0,8,216	0/0:2,0:5:9.03:0,9,316	0/0:11,0:18:33.10:0,33,1026	0/0:14,0:19:42.14:0,42,1455	1/1:5,11:16:33.07:613,33,0	1/1:2,16:19:42.10:863,42,0	1/1:3,4:7:3.01:78,3,0	./.	0/0:3,0:4:5.99:0,6,49	0/0:5,0:5:6.02:0,6,218	0/0:8,0:8:21.07:0,21,749	0/0:4,0:7:9.03:0,9,293	1/1:2,17:19:33.11:799,33,0	0/0:6,0:11:18.06:0,18,621
chr10	103738688	.	GTTTT	G	942.10	PASS	AB=0.649;AC=8;AF=0.143;AN=56;BaseQRankSum=1.306;DP=605;FS=0.624;HRun=18;HaplotypeScore=113.9160;InbreedingCoeff=0.7113;MQ=71.76;MQ0=11;MQRankSum=-0.490;QD=10.35;ReadPosRankSum=2.792;VQSLOD=-0.3976;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:25:45.95:0,46,781	0/0:5,0:8:17.09:0,17,344	0/0:77,0:25:35.09:0,35,425	0/0:77,0:25:22.28:0,22,280	0/0:12,0:29:69.19:0,69,1094	0/0:19,0:19:39.13:0,39,754	0/0:11,0:13:21.02:0,21,315	1/1:13,6:21:21.51:232,22,0	0/0:13,0:14:36.54:0,37,607	0/0:26,0:27:46.37:0,46,755	0/0:16,0:20:48.06:0,48,795	0/0:6,0:6:17.98:0,18,303	0/0:9,0:9:24.08:0,24,428	0/0:10,0:18:47.74:0,48,783	0/0:7,0:13:30.10:0,30,523	0/0:7,0:11:27.07:0,27,460	0/0:15,0:18:36.12:0,36,663	0/0:17,0:19:48.16:0,48,945	1/1:12,7:23:18.39:226,18,0	0/1:10,12:24:5.46:280,0,5	0/1:5,4:10:27.73:61,0,28	0/0:4,0:9:15.05:0,15,281	0/0:19,0:24:57.19:0,57,1075	0/0:13,0:17:47.88:0,48,784	0/0:16,0:19:6.37:0,6,671	0/0:14,0:26:60.20:0,60,1050	1/1:3,9:13:25.11:295,25,0	0/0:6,0:15:30.10:0,30,567
chr10	103739802	.	G	GGA	12707.56	PASS	AB=0.542;AC=20;AF=0.357;AN=56;BaseQRankSum=1.309;DP=720;FS=0.000;HRun=0;HaplotypeScore=92.0171;InbreedingCoeff=0.8774;MQ=70.43;MQ0=2;MQRankSum=-0.802;QD=44.43;ReadPosRankSum=-1.713;VQSLOD=5.6744;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,163,2381	0/0:8,0:8:24.08:0,24,353	0/0:19,0:18:27.63:0,28,456	0/0:23,0:21:55.98:0,56,763	1/1:2,28:30:78.27:1442,78,0	0/0:21,0:21:60.17:0,60,860	0/0:20,0:20:60.18:0,60,845	1/1:2,25:28:74.66:1273,75,0	0/0:28,0:28:84.27:0,84,1210	0/0:28,0:28:84.28:0,84,1237	0/0:17,0:17:48.16:0,48,705	0/0:21,0:21:54.18:0,54,788	0/0:37,0:37:99:0,111,1611	0/0:23,0:23:66.22:0,66,972	1/1:5,30:35:67.55:1394,68,0	1/1:1,26:28:66.23:1236,66,0	0/0:31,0:31:87.27:0,87,1255	0/0:18,0:18:54.13:0,54,748	1/1:3,16:19:54.11:878,54,0	0/1:2,13:16:2.02:668,0,2	1/1:3,43:45:99:2079,111,0	1/1:1,20:22:60.21:1119,60,0	0/0:16,0:16:45.15:0,45,662	0/0:43,0:43:99:0,111,1634	0/0:27,0:27:78.25:0,78,1127	0/1:5,22:27:10.14:1159,0,10	1/1:0,26:26:66.23:1236,66,0	1/1:0,8:8:12.04:224,12,0
chr10	103740237	.	A	AT	5917.49	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-12.500;DP=481;FS=2.653;HRun=7;HaplotypeScore=44.9889;InbreedingCoeff=0.9807;MQ=70.03;MQ0=0;MQRankSum=-0.999;QD=28.31;ReadPosRankSum=-2.315;VQSLOD=4.5260;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.09:0,75,717	0/0:6,0:6:12.01:0,12,116	0/0:20,0:14:20.23:0,20,230	0/0:9,0:7:7.56:0,8,63	1/1:3,27:30:49.26:870,49,0	0/0:23,0:23:63.10:0,63,608	0/0:18,0:18:48.07:0,48,463	1/1:6,18:24:51.14:604,51,0	0/0:16,0:16:42.07:0,42,406	0/0:19,0:19:48.08:0,48,463	0/0:16,0:16:48.08:0,48,464	0/0:17,0:17:48.06:0,48,457	0/0:12,0:12:33.05:0,33,318	0/0:10,0:10:30.05:0,30,290	1/1:2,18:20:34.05:596,34,0	1/1:2,9:11:30.08:353,30,0	0/0:14,0:14:33.05:0,33,319	0/0:11,0:11:27.04:0,27,261	1/1:2,19:21:57.17:687,57,0	1/1:1,22:23:66.20:793,66,0	1/1:2,12:14:27.08:326,27,0	1/1:3,5:8:15.04:177,15,0	0/0:22,0:22:60.08:0,60,574	0/0:12,0:12:30.05:0,30,290	0/0:20,0:20:51.07:0,51,493	1/1:2,17:19:51.14:605,51,0	1/1:4,17:21:48.15:580,48,0	1/1:6,12:18:27.08:326,27,0
chr10	103740411	.	G	GGAGA	12154.64	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=-11.373;DP=654;FS=1.553;HRun=0;HaplotypeScore=111.8223;InbreedingCoeff=0.8539;MQ=78.23;MQ0=1;MQRankSum=-0.778;QD=35.03;ReadPosRankSum=-2.067;VQSLOD=4.1890;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:35:74.60:0,75,1023	0/0:14,0:14:39.13:0,39,641	0/1:30,0:25:45.10:45,0,168	0/1:27,0:22:46.50:46,0,231	1/1:11,13:25:35.06:877,35,0	0/0:13,0:14:30.10:0,30,471	0/0:23,0:25:66.19:0,66,1021	1/1:23,14:40:62.68:890,63,0	0/0:12,0:14:39.12:0,39,601	0/0:22,0:24:39.10:0,39,556	0/0:19,0:20:45.15:0,45,718	0/0:19,0:19:48.16:0,48,792	0/0:21,0:21:45.13:0,45,716	0/0:14,0:17:42.10:0,42,596	1/1:8,15:26:56.64:1275,57,0	1/1:3,16:21:56.93:1315,57,0	0/0:26,0:27:57.13:0,57,887	0/0:9,0:12:30.06:0,30,404	1/1:5,12:19:50.58:999,51,0	1/1:7,26:35:56.66:1273,57,0	1/1:4,10:17:38.60:830,39,0	1/1:5,16:21:42.14:1029,42,0	0/0:30,0:30:81.28:0,81,1332	0/0:16,0:20:57.17:0,57,855	0/0:14,0:15:30.09:0,30,474	1/1:9,26:41:99:1970,99,0	1/1:5,14:21:35.86:821,36,0	1/1:4,16:24:41.08:785,41,0
chr10	103741982	.	GTC	G	3078.09	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.250;DP=691;FS=3.233;HRun=0;HaplotypeScore=85.9931;InbreedingCoeff=0.9980;MQ=69.43;MQ0=9;MQRankSum=-0.831;QD=25.65;ReadPosRankSum=-0.587;VQSLOD=4.3533;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,129,2140	0/0:8,0:8:21.07:0,21,353	0/0:44,0:26:40.36:0,40,560	0/0:51,1:28:28.39:0,28,393	0/0:16,0:15:27.07:0,27,419	0/0:17,0:17:48.12:0,48,732	0/0:33,0:33:87.27:0,87,1387	1/1:12,30:42:87.25:1091,87,0	0/0:29,0:29:81.26:0,81,1348	0/0:25,0:25:75.26:0,75,1264	0/0:18,0:18:51.16:0,51,821	0/0:20,0:20:54.18:0,54,902	0/0:21,0:21:54.14:0,54,863	0/0:24,0:24:69.21:0,69,1096	0/0:23,0:23:66.21:0,66,1096	0/0:24,0:24:66.21:0,66,1083	0/0:20,0:20:45.15:0,45,752	0/0:17,0:17:51.17:0,51,867	1/1:2,15:17:47.87:569,48,0	1/1:2,15:17:27.09:345,27,0	1/1:3,21:24:54.18:702,54,0	0/0:21,0:21:57.17:0,57,894	0/0:14,0:13:30.03:0,30,446	0/0:46,0:47:99:0,114,1877	0/0:17,0:17:48.15:0,48,778	0/0:23,0:23:54.18:0,54,890	1/1:2,18:20:42.14:546,42,0	0/0:11,0:11:27.09:0,27,447
chr10	103743252	.	ATGTGTG	A	735.91	PASS	AB=0.783;AC=9;AF=0.173;AN=52;BaseQRankSum=4.834;DP=605;FS=6.828;HRun=0;HaplotypeScore=127.1659;InbreedingCoeff=0.4570;MQ=52.62;MQ0=13;MQRankSum=-3.344;QD=5.41;ReadPosRankSum=0.562;VQSLOD=1.7198;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:34:56.80:0,57,1549	0/0:8,0:8:6.02:0,6,174	./.	0/0:34,0:16:3.48:0,3,68	0/0:14,0:18:9.43:0,9,186	0/1:10,1:14:39.64:40,0,124	0/1:15,1:26:32.53:33,0,310	./.	0/0:22,0:23:35.16:0,35,1107	0/0:14,0:13:18.05:0,18,429	0/0:9,0:11:18.06:0,18,504	0/0:27,0:29:42.13:0,42,1084	0/0:24,0:24:48.16:0,48,1282	0/0:13,0:15:21.07:0,21,550	0/0:14,0:22:8.15:0,8,113	0/0:9,0:13:22.67:0,23,374	0/0:32,0:31:54.19:0,54,1680	0/0:23,0:26:36.12:0,36,840	0/1:17,3:19:11.56:84,0,12	1/1:4,6:10:12.04:221,12,0	1/1:36,13:49:5.69:117,6,0	0/0:19,0:19:12.51:0,13,255	0/0:5,0:6:6.02:0,6,176	0/0:26,0:31:45.11:0,45,1161	0/0:20,0:20:29.27:0,29,876	0/0:22,0:29:40.35:0,40,877	1/1:9,6:17:21.96:388,22,0	0/0:5,0:7:9.03:0,9,152
chr10	103744864	.	TG	T	926.50	PASS	AB=0.936;AC=18;AF=0.321;AN=56;BaseQRankSum=3.499;DP=483;FS=7.223;HRun=12;HaplotypeScore=57.5031;InbreedingCoeff=0.3209;MQ=67.98;MQ0=12;MQRankSum=-0.395;QD=4.21;ReadPosRankSum=1.261;VQSLOD=0.5387;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:28:16.75:0,17,278	0/1:6,0:6:7.93:8,0,62	0/1:44,1:18:8.43:8,0,114	0/0:31,0:9:7.35:0,7,94	0/1:16,0:16:0.76:1,0,160	0/0:14,0:14:2.71:0,3,153	0/0:16,0:16:40.07:0,40,350	1/1:6,5:12:13.06:118,13,0	0/0:11,2:13:0.51:0,1,159	0/0:13,0:13:14.95:0,15,140	0/0:21,0:22:3.40:0,3,267	0/1:12,2:14:0.77:1,0,145	0/0:14,0:15:17.50:0,17,205	0/0:10,1:11:1.79:0,2,123	0/0:17,0:17:26.96:0,27,254	0/0:15,0:15:6.14:0,6,244	0/0:23,0:23:36.88:0,37,516	0/0:10,0:10:21.04:0,21,213	1/1:3,10:14:28.83:205,29,0	1/1:8,12:20:29.79:226,30,0	1/1:0,14:14:23.91:186,24,0	0/1:10,0:10:0.47:0,0,50	0/0:18,1:19:13.50:0,14,163	0/0:16,0:16:33.04:0,33,321	0/1:15,2:17:17.52:18,0,72	0/1:7,2:9:21.87:25,0,22	1/1:11,9:20:34.30:284,34,0	0/1:21,2:22:16.02:16,0,341
chr10	103746915	.	A	AAAAC	2725.02	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-6.991;DP=697;FS=2.745;HRun=0;HaplotypeScore=113.0955;InbreedingCoeff=0.8769;MQ=61.29;MQ0=6;MQRankSum=4.450;QD=24.33;ReadPosRankSum=0.979;VQSLOD=3.6119;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:47:96.32:0,96,1512	0/0:9,0:8:12.04:0,12,193	0/0:23,0:8:21.03:0,21,286	0/0:20,0:9:6.02:0,6,96	0/0:27,0:28:69.20:0,69,1020	0/0:19,0:19:36.11:0,36,532	0/0:21,0:21:36.04:0,36,481	0/0:14,0:25:2.51:0,3,47	0/0:14,0:14:15.05:0,15,241	0/0:34,0:33:63.20:0,63,948	0/0:23,0:23:45.11:0,45,691	0/0:23,0:23:42.14:0,42,673	0/0:26,0:26:54.14:0,54,793	0/0:23,0:23:51.17:0,51,798	0/0:33,0:33:60.13:0,60,840	0/0:20,0:20:42.13:0,42,652	0/0:36,0:36:69.12:0,69,996	0/0:22,0:20:42.07:0,42,611	1/1:9,12:20:36.11:802,36,0	1/1:14,19:33:57.11:1214,57,0	1/1:11,21:35:24.08:576,24,0	0/0:19,0:19:30.08:0,30,439	0/0:14,0:14:24.06:0,24,343	0/0:39,0:39:69.22:0,69,1063	0/0:30,0:30:57.17:0,57,869	0/0:30,0:30:60.18:0,60,899	1/1:3,16:23:12.98:290,13,0	0/0:7,0:7:6.02:0,6,96
chr10	103749365	.	T	TGGG	5320.41	PASS	AB=0.636;AC=11;AF=0.196;AN=56;BaseQRankSum=7.818;DP=834;FS=51.193;HRun=1;HaplotypeScore=186.4651;InbreedingCoeff=-0.2055;MQ=52.39;MQ0=34;MQRankSum=-4.824;QD=18.04;ReadPosRankSum=1.276;VQSLOD=-0.4313;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,108,1662	0/0:13,0:13:39.12:0,39,628	0/0:24,0:11:24.06:0,24,381	0/0:37,0:24:63.14:0,63,998	0/1:5,5:16:66.73:197,0,67	0/0:28,0:27:57.18:0,57,895	0/0:41,0:41:99:0,111,1779	0/1:13,32:42:99:928,0,102	0/0:38,0:38:99:0,105,1636	0/0:43,0:43:99:0,120,1970	0/0:14,0:14:15.05:0,15,247	0/0:45,0:43:99:0,111,1677	0/0:32,0:32:96.30:0,96,1580	0/0:32,0:32:81.21:0,81,1258	0/1:6,22:29:6.19:690,0,6	0/1:9,13:21:19.55:253,0,20	0/0:41,0:41:96.20:0,96,1169	0/0:19,0:19:51.06:0,51,797	0/1:14,14:26:99:879,0,115	0/1:13,5:18:54:387,0,54	0/1:18,21:38:58.13:353,0,58	0/1:18,2:20:99:181,0,104	0/0:34,0:34:51.01:0,51,768	0/0:29,0:29:78.26:0,78,1331	0/0:24,0:24:48.15:0,48,771	0/1:9,17:25:99:745,0,209	0/1:8,13:21:99:282,0,185	0/1:3,8:12:91.70:425,0,92
chr10	103749374	.	G	GTGTGTGTGTA	7024.85	PASS	AB=0.938;AC=20;AF=0.357;AN=56;BaseQRankSum=4.021;DP=846;FS=52.300;HRun=0;HaplotypeScore=267.8968;InbreedingCoeff=0.8109;MQ=45.37;MQ0=36;MQRankSum=-4.269;QD=23.89;ReadPosRankSum=-0.825;VQSLOD=2.6082;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,102,1669	0/0:12,0:12:30.03:0,30,759	0/0:28,0:11:17.91:0,18,143	0/0:38,0:20:47.93:0,48,424	1/1:12,5:14:4.68:328,5,0	0/0:29,0:28:50.87:0,51,789	0/0:45,0:45:95.01:0,95,1987	0/1:42,0:38:30:239,0,30	0/0:34,0:35:92.83:0,93,1688	0/0:44,0:44:99:0,103,1703	0/0:12,0:12:11.95:0,12,244	0/0:45,0:43:87.28:0,87,1756	0/0:31,0:31:68.82:0,69,1331	0/0:28,0:28:63.55:0,64,1439	1/1:27,8:33:50.21:1305,50,0	1/1:28,2:28:23.84:479,24,0	0/0:44,0:44:81.47:0,81,1198	0/0:22,0:21:50.02:0,50,937	0/1:24,0:24:22.59:649,0,23	1/1:12,0:15:11.74:515,12,0	1/1:46,0:45:17.85:526,18,0	1/1:21,1:19:26.22:474,26,0	0/0:31,0:31:59.95:0,60,967	0/0:32,0:32:74.53:0,75,1686	0/0:26,0:26:45.04:0,45,925	1/1:26,1:23:22.03:938,22,0	1/1:15,0:16:32.16:808,32,0	1/1:9,3:11:32.89:764,33,0
chr10	103750051	.	G	GC	96.12	PASS	AB=0.910;AC=10;AF=0.192;AN=52;BaseQRankSum=3.975;DP=491;FS=1.344;HRun=0;HaplotypeScore=261.6498;InbreedingCoeff=-0.0268;MQ=32.79;MQ0=1;MQRankSum=-1.501;QD=0.41;ReadPosRankSum=1.139;VQSLOD=2.5641;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,1:24:9.68:0,10,100	0/1:12,0:12:2.66:6,0,3	./.	./.	0/0:23,6:29:3.89:0,4,45	0/0:10,0:10:4.55:0,5,27	0/0:11,0:11:2.99:0,3,25	0/1:10,7:17:81.16:81,0,82	0/0:15,1:16:7.14:0,7,33	0/1:35,3:37:1.72:2,0,304	0/0:16,3:19:1.92:0,2,5	0/0:10,5:15:11.65:0,12,52	0/0:19,1:20:15.81:0,16,63	0/1:13,1:13:13.85:14,0,19	0/0:11,2:12:9.07:0,9,80	0/0:16,1:17:13.99:0,14,65	0/0:6,0:6:3.67:0,4,75	0/0:7,0:7:11.80:0,12,95	0/1:7,4:9:13.75:50,0,14	0/1:38,3:41:3.32:3,0,37	0/0:7,1:7:0.47:0,0,1	0/1:27,1:28:0.81:1,0,21	0/0:25,2:27:0.95:0,1,4	0/1:12,0:12:0:0,0,0	0/1:38,1:39:3.86:4,0,4	0/1:23,2:25:43.68:44,0,166	0/0:17,0:17:11.65:0,12,79	0/0:12,1:13:5.61:0,6,92
chr10	103750055	.	G	GC	809.33	PASS	AB=0.909;AC=11;AF=0.204;AN=54;BaseQRankSum=4.619;DP=531;FS=11.497;HRun=0;HaplotypeScore=131.8032;InbreedingCoeff=-0.0494;MQ=34.12;MQ0=1;MQRankSum=-3.137;QD=3.70;ReadPosRankSum=4.188;VQSLOD=2.5980;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:5.53:0,6,214	0/0:12,0:12:10.81:0,11,110	./.	0/0:4,0:3:5.65:0,6,32	0/0:28,3:31:1.95:0,2,39	0/0:11,0:12:8.05:0,8,89	0/0:13,1:14:6.47:0,6,65	0/1:14,2:17:99:245,0,103	0/1:14,2:16:23.76:33,0,24	0/1:31,5:37:99:234,0,662	0/0:19,1:20:5.67:0,6,82	0/0:17,0:17:12.09:0,12,98	0/0:18,2:20:21.38:0,21,228	1/1:10,4:14:2.19:33,2,0	0/0:11,2:12:5.98:0,6,66	0/0:14,4:18:7.27:0,7,85	0/0:7,0:7:14.68:0,15,140	0/1:7,0:7:0.35:0,0,104	0/1:11,0:9:68.79:106,0,69	0/0:38,4:44:6.51:0,7,84	0/0:11,0:10:8.96:0,9,104	0/0:27,3:30:5.01:0,5,67	0/1:25,4:29:0.12:1,0,0	0/0:15,0:15:8.82:0,9,121	0/1:37,3:40:1.95:2,0,2	0/1:20,5:25:99:266,0,312	0/1:18,3:20:13.86:14,0,225	0/0:13,0:13:21.82:0,22,255
chr10	103750058	.	T	TGCA	864.14	PASS	AB=0.898;AC=8;AF=0.148;AN=54;BaseQRankSum=5.834;DP=565;FS=20.349;HRun=0;HaplotypeScore=157.6151;InbreedingCoeff=-0.0520;MQ=33.99;MQ0=1;MQRankSum=-6.065;QD=5.47;ReadPosRankSum=4.915;VQSLOD=1.0604;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:16.74:0,17,243	0/0:15,0:15:4.55:0,5,138	./.	0/0:5,0:4:8.82:0,9,117	0/0:30,3:33:6.15:0,6,93	0/0:14,0:14:6.69:0,7,153	0/0:14,1:15:15.41:0,15,195	0/1:19,2:21:99:148,0,139	0/1:15,2:17:41.28:61,0,41	0/1:34,5:38:99:265,0,753	0/0:19,1:20:9.31:0,9,112	0/0:17,0:17:14.22:0,14,168	0/0:18,2:20:24.17:0,24,315	1/1:13,4:16:3.51:58,4,0	0/0:12,2:13:5.81:0,6,67	0/0:15,4:19:5.73:0,6,105	0/0:7,0:7:19.82:0,20,284	0/0:8,0:8:17.93:0,18,182	0/1:14,0:12:17.93:18,0,145	0/0:40,4:44:7.81:0,8,99	0/0:13,0:12:17.75:0,18,266	0/0:29,3:32:9.44:0,9,153	0/0:25,4:29:2.06:0,2,48	0/0:16,0:16:11.69:0,12,208	0/0:38,3:41:9.16:0,9,25	0/1:22,5:27:99:350,0,281	0/1:19,3:22:92.71:93,0,357	0/0:13,0:13:33.68:0,34,301
chr10	103750061	.	G	GGTC	451.02	PASS	AB=0.978;AC=11;AF=0.204;AN=54;BaseQRankSum=4.562;DP=590;FS=19.390;HRun=0;HaplotypeScore=168.4240;InbreedingCoeff=-0.1522;MQ=35.56;MQ0=1;MQRankSum=-5.816;QD=1.84;ReadPosRankSum=3.252;VQSLOD=1.2463;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:16.32:0,16,247	0/0:16,0:16:3.35:0,3,150	./.	0/0:7,0:6:18.01:0,18,228	0/0:35,0:35:6.15:0,6,96	0/1:13,1:14:45.21:45,0,152	0/0:16,0:16:15.45:0,15,220	0/1:20,1:21:95.80:162,0,96	0/1:18,0:18:8.47:8,0,44	0/1:38,2:39:99:168,0,740	0/0:20,0:20:9.31:0,9,117	0/0:17,0:17:14.47:0,14,159	0/0:20,0:20:27.54:0,28,345	1/1:19,0:18:0.80:2,1,0	0/0:15,0:14:5.97:0,6,75	0/1:22,0:22:0.82:1,0,101	0/0:7,0:7:19.84:0,20,296	0/0:10,0:10:22.22:0,22,188	0/1:15,0:13:54.69:55,0,152	0/1:43,2:45:44.52:45,0,91	0/0:13,0:12:17.79:0,18,308	0/0:32,0:32:9.44:0,9,151	0/0:29,0:29:1.59:0,2,46	0/0:18,0:18:11.69:0,12,218	0/0:42,0:42:9.25:0,9,25	0/1:28,0:28:88.23:88,0,241	0/1:23,0:22:0.47:0,0,392	0/0:13,0:13:29.67:0,30,282
chr10	103750075	.	A	ACG	758.04	PASS	AB=0.861;AC=9;AF=0.161;AN=56;BaseQRankSum=8.772;DP=506;FS=53.155;HRun=0;HaplotypeScore=301.0611;InbreedingCoeff=-0.1774;MQ=54.93;MQ0=1;MQRankSum=-6.702;QD=4.51;ReadPosRankSum=1.761;VQSLOD=1.1100;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:63.99:0,64,1026	0/0:13,1:14:21.52:0,22,350	0/0:8,0:6:12.01:0,12,145	0/0:15,0:14:42.11:0,42,621	0/0:18,5:23:6.68:0,7,322	0/0:13,0:13:28.04:0,28,450	0/0:14,1:15:26.89:0,27,527	0/1:17,5:22:99:186,0,475	0/1:17,2:19:16.55:17,0,588	0/1:25,5:30:99:134,0,551	0/0:15,1:16:8.08:0,8,285	0/0:12,0:12:15.66:0,16,379	0/1:13,2:15:29.32:29,0,409	0/0:10,5:15:30.10:0,30,487	0/0:11,2:13:27.09:0,27,438	0/0:16,4:20:35.78:0,36,629	0/0:7,0:7:17.80:0,18,257	0/0:10,0:10:21.04:0,21,315	0/1:7,1:8:6.83:7,0,218	0/1:25,4:29:0.87:1,0,321	0/0:17,0:17:21.54:0,22,343	0/0:22,3:25:20.69:0,21,492	0/0:22,4:26:13:0,13,381	0/0:15,0:15:33.11:0,33,530	0/0:37,3:40:16.13:0,16,531	0/1:13,7:20:99:348,0,360	0/1:13,5:17:99:142,0,443	0/1:7,0:7:13.22:27,0,13
chr10	103750429	.	AG	A	9695.55	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=12.388;DP=745;FS=3.149;HRun=5;HaplotypeScore=73.6610;InbreedingCoeff=1.0000;MQ=86.19;MQ0=0;MQRankSum=-1.639;QD=28.60;ReadPosRankSum=2.003;VQSLOD=5.3229;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,1743	0/0:13,0:13:39.05:0,39,495	0/0:31,0:31:59.22:0,59,989	0/0:24,0:24:63.18:0,63,827	1/1:2,26:28:69.05:737,69,0	0/0:28,0:28:78.25:0,78,1049	0/0:23,0:23:66.22:0,66,900	1/1:2,35:37:99:1132,105,0	0/0:31,0:31:90.28:0,90,1211	0/0:29,0:29:78.22:0,78,1033	0/0:22,0:22:62.93:0,63,758	0/0:19,0:19:57.17:0,57,746	0/0:19,0:19:53.97:0,54,709	0/0:21,0:21:57.16:0,57,736	1/1:2,28:30:75.21:851,75,0	1/1:1,42:43:99:1191,105,0	0/0:18,0:18:54.05:0,54,645	0/0:12,0:12:36.09:0,36,460	1/1:2,19:21:54.14:605,54,0	1/1:2,29:31:75.01:788,75,0	1/1:1,24:25:66.19:748,66,0	1/1:0,33:33:90.17:992,90,0	0/0:22,0:22:56.69:0,57,634	0/0:22,0:22:66.20:0,66,872	0/0:29,0:29:84.14:0,84,1101	1/1:4,28:32:84.24:952,84,0	1/1:2,32:34:93.27:1054,93,0	1/1:0,25:25:57.16:646,57,0
chr10	103751831	.	ACCCC	A	218.54	PASS	AC=8;AF=0.333;AN=24;BaseQRankSum=-1.838;DP=51;FS=0.000;HRun=11;HaplotypeScore=14.0964;InbreedingCoeff=0.4904;MQ=94.91;MQ0=1;MQRankSum=-3.098;QD=24.28;ReadPosRankSum=1.208;VQSLOD=-0.3706;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:8,0:3:9.03:0,9,156	0/0:12,0:4:5.52:0,6,25	./.	./.	./.	0/0:0,0:1:0:0,0,0	0/0:2,0:2:6:0,6,99	./.	./.	./.	./.	./.	1/1:0,3:3:9.03:140,9,0	1/1:1,2:3:5.99:94,6,0	0/0:1,0:1:0:0,0,0	0/0:1,0:1:3.01:0,3,75	./.	./.	0/0:1,0:2:0:0,0,0	1/1:1,0:1:3.01:46,3,0	./.	./.	./.	1/1:1,1:2:5.71:32,6,0	./.	0/0:1,0:1:0:0,0,0
chr10	103752110	.	G	GC	963.67	PASS	AB=0.930;AC=19;AF=0.339;AN=56;BaseQRankSum=2.267;DP=426;FS=26.324;HRun=0;HaplotypeScore=139.1591;InbreedingCoeff=0.6949;MQ=80.16;MQ0=0;MQRankSum=-0.048;QD=6.83;ReadPosRankSum=-0.790;VQSLOD=1.4455;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:65.62:0,66,796	0/0:7,0:7:17.99:0,18,203	0/0:15,0:15:36.38:0,36,426	0/0:22,0:21:27.79:0,28,527	1/1:6,0:6:6.40:25,6,0	0/0:18,0:18:45.07:0,45,532	0/0:24,0:24:65.39:0,65,723	1/1:28,2:30:55.78:403,56,0	0/0:19,0:19:51.09:0,51,605	0/0:18,0:18:48.07:0,48,571	0/0:1,0:1:3.01:0,3,38	0/0:30,0:30:77.79:0,78,973	0/0:14,0:14:39.05:0,39,459	0/0:17,0:17:48.06:0,48,563	1/1:15,0:15:10.96:63,11,0	0/1:11,1:12:54.25:97,0,54	0/0:21,0:21:54.13:0,54,646	0/0:13,0:13:30.09:0,30,371	1/1:16,0:16:9.11:114,9,0	1/1:6,0:6:7.73:35,8,0	1/1:18,1:19:36.84:201,37,0	1/1:5,0:5:3.97:20,4,0	0/0:6,0:6:15.04:0,15,176	0/0:23,0:23:60.01:0,60,677	0/0:11,0:11:28.31:0,28,355	0/1:16,0:16:9.75:98,0,10	0/1:11,2:13:0.66:76,0,1	1/1:3,0:3:6.06:22,6,0
chr10	103752184	.	T	TC	8709.85	PASS	AB=0.533;AC=21;AF=0.375;AN=56;BaseQRankSum=-4.186;DP=595;FS=0.682;HRun=0;HaplotypeScore=122.5437;InbreedingCoeff=0.9448;MQ=91.22;MQ0=0;MQRankSum=-3.583;QD=41.48;ReadPosRankSum=-0.958;VQSLOD=3.9987;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,1592	0/0:6,0:6:15.05:0,15,208	0/0:25,0:25:72.18:0,72,964	0/0:29,0:29:78.26:0,78,1080	1/1:2,11:13:36.11:551,36,0	0/0:18,0:18:51.17:0,51,712	0/0:28,0:28:72.24:0,72,1007	1/1:1,33:33:99:1579,102,0	0/0:25,0:25:72.24:0,72,1006	0/0:14,0:14:42.13:0,42,573	0/0:7,0:7:21.07:0,21,294	0/0:24,0:24:69.23:0,69,962	0/0:17,0:17:51.17:0,51,712	0/0:26,0:26:75.25:0,75,1047	1/1:2,22:24:57.19:906,57,0	0/1:2,14:16:3.14:534,0,3	0/0:32,0:32:93.24:0,93,1242	0/0:33,0:33:96.30:0,96,1321	1/1:2,19:21:57.19:909,57,0	1/1:0,13:13:30.10:479,30,0	1/1:4,36:40:99:1724,111,0	1/1:0,9:9:21.07:335,21,0	0/0:12,0:12:33.11:0,33,461	0/0:35,0:35:90.30:0,90,1258	0/0:13,0:13:39.12:0,39,527	1/1:3,15:18:48.16:754,48,0	1/1:0,14:14:39.13:604,39,0	1/1:1,7:8:21.07:335,21,0
chr10	103752369	.	GTA	G	1797.49	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=2.457;DP=607;FS=9.619;HRun=0;HaplotypeScore=100.7470;InbreedingCoeff=0.3520;MQ=50.40;MQ0=10;MQRankSum=-3.826;QD=4.63;ReadPosRankSum=-3.791;VQSLOD=0.4175;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:42:23.33:23,0,541	0/1:7,0:7:12.38:39,0,12	0/0:18,0:9:3.07:0,3,121	0/1:27,0:12:11.67:12,0,141	1/1:10,0:10:11.98:99,12,0	0/0:15,0:15:10.76:0,11,247	0/1:33,0:33:15.62:16,0,390	1/1:28,0:27:63.92:435,64,0	0/1:22,0:22:14.02:14,0,432	0/1:24,0:24:31.12:31,0,454	0/0:18,0:16:17.73:0,18,163	0/0:26,0:26:33.05:0,33,398	0/1:25,0:25:10.87:11,0,338	0/0:26,0:26:37.30:0,37,477	1/1:25,0:25:3.01:148,3,0	1/1:14,0:14:21.72:161,22,0	0/0:52,0:51:76.94:0,77,1268	0/1:30,0:30:7.57:8,0,491	1/1:3,13:14:26.31:207,26,0	1/1:7,0:7:14.86:107,15,0	1/1:31,0:30:22.99:264,23,0	1/1:9,0:9:8.99:75,9,0	0/0:15,0:14:20.19:0,20,177	0/0:32,0:31:47.95:0,48,806	0/0:17,0:17:26.55:0,27,342	1/1:15,0:14:6.20:127,6,0	1/1:0,12:12:8.05:71,8,0	1/1:11,0:11:7.36:146,7,0
chr10	103752371	.	ATG	A	61.39	PASS	AB=0.966;AC=15;AF=0.300;AN=50;BaseQRankSum=1.938;DP=608;FS=1.947;HRun=0;HaplotypeScore=107.5849;InbreedingCoeff=0.0332;MQ=49.88;MQ0=11;MQRankSum=0.855;QD=0.24;ReadPosRankSum=-1.221;VQSLOD=2.1709;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:42:47.71:48,0,458	1/1:7,0:7:3.99:15,4,0	1/1:17,0:7:0.47:1,0,0	./.	0/1:10,0:10:0.55:1,0,19	0/0:15,0:15:18.06:0,18,248	0/1:29,6:35:46.29:46,0,181	0/0:27,0:26:9.34:0,9,41	0/0:22,0:22:22.80:0,23,321	0/1:24,0:24:7.53:8,0,437	0/0:17,0:15:8.85:0,9,114	0/0:23,0:25:12.39:0,12,213	0/1:24,0:24:11.28:11,0,200	0/1:26,1:27:0.06:0,0,274	0/0:25,0:25:17.96:0,18,163	0/1:14,0:14:16.01:28,0,16	0/0:50,2:51:43.09:0,43,938	0/1:25,4:29:7.05:7,0,376	0/1:16,0:14:0.23:0,0,20	./.	0/0:31,0:30:16.24:0,16,141	./.	0/0:15,0:14:2.72:0,3,44	0/0:33,0:32:22.08:0,22,586	0/0:17,0:18:14.58:0,15,201	0/0:14,0:13:9.65:0,10,95	1/1:13,0:13:1.99:21,2,0	0/0:11,0:11:8.93:0,9,82
chr10	103753487	.	CAGAGAG	C	436.38	PASS	AC=12;AF=0.300;AN=40;BaseQRankSum=4.805;DP=620;FS=16.628;HRun=0;HaplotypeScore=110.2030;InbreedingCoeff=0.6044;MQ=68.71;MQ0=18;MQRankSum=-1.698;QD=3.76;ReadPosRankSum=-0.601;VQSLOD=0.8466;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:11.51:0,12,199	0/0:9,0:9:15.02:0,15,276	./.	./.	1/1:17,0:16:3:25,3,0	./.	1/1:25,5:31:3.01:42,3,0	0/0:26,0:26:1.55:0,2,4	0/0:16,0:16:18.06:0,18,388	0/0:17,0:17:14.99:0,15,254	0/0:15,0:15:3:0,3,25	0/0:16,0:16:12.03:0,12,244	0/0:17,0:17:2.97:0,3,38	0/0:18,0:18:22.30:0,22,439	1/1:19,2:22:17.95:230,18,0	1/1:13,0:15:12.50:154,12,0	0/0:19,0:20:8.09:0,8,148	0/0:19,0:21:4.17:0,4,58	1/1:9,1:10:3.01:60,3,0	./.	./.	./.	0/0:8,0:8:3.01:0,3,43	0/0:29,0:30:25.71:0,26,707	0/0:20,0:20:9.03:0,9,175	./.	1/1:20,1:21:2.85:59,3,0	./.
chr10	103754507	.	C	CT	3707.95	PASS	AB=0.793;AC=22;AF=0.393;AN=56;BaseQRankSum=3.503;DP=502;FS=2.805;HRun=10;HaplotypeScore=61.9079;InbreedingCoeff=0.6461;MQ=73.22;MQ0=1;MQRankSum=-0.260;QD=16.12;ReadPosRankSum=-2.993;VQSLOD=3.3097;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:44.91:0,45,366	0/0:4,0:4:11.96:0,12,94	0/1:16,0:13:7.12:7,0,88	0/1:13,0:11:14.35:14,0,18	1/1:5,20:26:32.46:539,32,0	0/0:28,0:28:71.90:0,72,588	0/0:15,0:15:35.94:0,36,296	1/1:10,22:33:44.80:635,45,0	0/0:18,0:18:47.94:0,48,394	0/0:15,0:15:35.95:0,36,295	0/0:17,0:17:38.94:0,39,320	0/0:18,1:19:21.77:0,22,367	0/0:12,1:13:3.99:0,4,239	0/0:15,0:16:37.99:0,38,301	1/1:6,9:17:5.10:228,5,0	1/1:2,8:10:24.06:256,24,0	0/0:24,0:24:62.91:0,63,517	0/0:26,0:26:67.94:0,68,548	1/1:6,13:20:17.37:357,17,0	0/1:3,15:19:1.37:370,0,1	1/1:4,9:13:5.43:263,5,0	1/1:4,10:15:2.26:214,2,0	0/0:22,0:22:56.90:0,57,468	0/0:13,1:16:8.04:0,8,251	0/0:19,0:19:28.43:0,28,361	1/1:5,15:21:26.28:452,26,0	0/1:7,10:16:25.12:168,0,25	1/1:2,6:9:20.89:206,21,0
chr10	103755655	.	C	CACAT	5347.70	PASS	AB=0.795;AC=22;AF=0.423;AN=52;BaseQRankSum=-4.971;DP=969;FS=7.106;HRun=0;HaplotypeScore=169.7300;InbreedingCoeff=0.8296;MQ=59.09;MQ0=4;MQRankSum=-1.181;QD=12.89;ReadPosRankSum=-2.558;VQSLOD=3.5980;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:71.89:0,72,1091	0/0:18,0:18:24.08:0,24,372	./.	./.	1/1:11,17:29:36.12:848,36,0	0/0:23,0:23:54.18:0,54,837	0/0:29,0:29:28.61:0,29,670	1/1:59,0:58:21.96:235,22,0	0/0:44,0:44:60.16:0,60,889	0/0:71,0:71:99:0,114,1732	0/1:35,1:36:10.63:11,0,827	0/0:37,0:38:69.21:0,69,1011	0/0:52,0:52:93.32:0,93,1441	0/0:36,0:37:63.21:0,63,947	1/1:18,19:39:30.10:708,30,0	1/1:19,17:36:51.18:1185,51,0	0/0:25,0:25:36.03:0,36,529	0/0:24,0:24:36.12:0,36,562	1/1:15,0:22:18.50:215,19,0	1/1:11,0:27:23.29:216,23,0	1/1:28,1:48:2.04:6,2,0	0/1:14,23:37:0.27:806,0,0	0/0:34,0:35:69.20:0,69,996	0/0:17,0:17:14.73:0,15,355	0/0:46,0:47:64.93:0,65,1000	1/1:19,12:31:36.11:804,36,0	1/1:13,2:30:8.99:171,9,0	1/1:12,5:18:6.02:142,6,0
chr10	103757089	.	TACATCCTG	T	11486.15	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=16.490;DP=801;FS=3.993;HRun=0;HaplotypeScore=220.0888;InbreedingCoeff=0.9991;MQ=80.94;MQ0=0;MQRankSum=-17.180;QD=68.37;ReadPosRankSum=4.132;VQSLOD=4.9548;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,5928	0/0:11,0:11:30.10:0,30,1325	0/0:28,0:28:73.21:0,73,3053	0/0:32,0:32:90.29:0,90,3521	1/1:5,16:21:42.14:1188,42,0	0/0:20,0:20:48.16:0,48,2087	0/0:33,0:33:93.32:0,93,4041	0/0:35,0:35:96.33:0,96,4210	0/0:25,0:25:75.26:0,75,3197	0/0:36,0:36:99:0,105,4376	0/0:23,0:23:66.23:0,66,2677	0/0:38,0:38:99:0,108,4525	0/0:29,0:29:87.30:0,87,3783	0/0:34,0:34:96.33:0,96,4078	1/1:0,29:29:81.28:2246,81,0	1/1:3,36:39:96.33:2685,96,0	0/0:22,0:22:66.20:0,66,2569	0/0:15,0:15:42.14:0,42,1655	0/0:24,0:24:66.23:0,66,2716	0/0:22,0:22:57.20:0,57,2526	0/0:51,0:51:99:0,144,6025	1/1:2,32:34:84.29:2375,84,0	0/0:21,0:21:60.21:0,60,2515	0/0:32,0:32:93.32:0,93,4012	0/0:23,0:23:66.23:0,66,2925	1/1:5,32:37:49.13:2428,49,0	0/0:32,0:32:96.33:0,96,4089	1/1:1,7:8:21.07:564,21,0
chr10	103759225	.	GT	G	2279.35	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.711;DP=608;FS=10.568;HRun=6;HaplotypeScore=66.8815;InbreedingCoeff=0.9961;MQ=83.33;MQ0=1;MQRankSum=-1.824;QD=24.78;ReadPosRankSum=-3.208;VQSLOD=1.8638;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,1624	0/0:8,0:8:24.08:0,24,316	0/0:42,0:34:46.29:0,46,753	0/0:24,0:17:20.03:0,20,280	0/0:19,0:19:57.13:0,57,712	0/0:21,0:21:60.17:0,60,749	0/0:24,0:24:66.21:0,66,869	1/1:4,19:23:57.14:612,57,0	0/0:15,0:15:39.13:0,39,512	0/0:20,0:20:60.19:0,60,788	0/0:15,0:15:42.14:0,42,552	0/0:18,0:18:51.17:0,51,671	0/0:16,0:16:45.13:0,45,572	0/0:21,0:21:57.19:0,57,749	0/0:19,0:19:57.13:0,57,692	0/0:16,0:16:45.13:0,45,577	0/0:43,0:43:99:0,120,1547	0/0:42,0:42:99:0,117,1520	1/1:2,17:19:51.12:539,51,0	1/1:7,10:17:45.08:465,45,0	1/1:1,19:20:45.11:483,45,0	0/0:6,0:6:18.06:0,18,237	0/0:20,0:20:57.17:0,57,734	0/0:30,0:30:81.26:0,81,1064	0/0:15,0:15:39.13:0,39,513	0/0:27,0:27:69.21:0,69,894	1/1:1,12:13:33.08:354,33,0	0/0:9,0:9:27.09:0,27,355
chr10	103759328	.	CG	C	3729.26	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.244;DP=524;FS=5.003;HRun=4;HaplotypeScore=58.4437;InbreedingCoeff=0.9945;MQ=83.92;MQ0=0;MQRankSum=-1.886;QD=31.34;ReadPosRankSum=-0.538;VQSLOD=3.6899;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,143,1889	0/0:5,0:5:15.05:0,15,210	0/0:18,0:18:48.15:0,48,647	0/0:14,0:14:39.10:0,39,498	0/0:12,0:12:36.12:0,36,502	0/0:15,0:14:42.14:0,42,588	0/0:25,0:25:66.22:0,66,916	1/1:1,15:16:39.12:468,39,0	0/0:15,0:15:45.13:0,45,609	0/0:26,0:26:72.22:0,72,977	0/0:18,0:18:54.16:0,54,736	0/0:21,0:21:63.21:0,63,879	0/0:17,0:17:48.15:0,48,649	0/0:7,0:7:21.06:0,21,278	0/0:12,0:12:33.11:0,33,462	0/0:10,0:10:30.10:0,30,419	0/0:22,0:22:66.22:0,66,923	0/0:24,0:24:69.23:0,69,966	1/1:2,14:16:42.08:471,42,0	1/1:1,17:18:48.11:561,48,0	1/1:2,42:44:99:1402,117,0	0/0:13,0:13:39.13:0,39,546	0/0:13,0:13:30.10:0,30,419	0/0:22,0:22:57.15:0,57,776	0/0:22,0:22:60.17:0,60,803	0/0:17,0:17:42.13:0,42,573	1/1:0,25:25:69.21:827,69,0	0/0:8,0:8:24.08:0,24,335
chr10	103760246	.	AGCGTCAG	A	5521.64	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.366;DP=651;FS=2.814;HRun=0;HaplotypeScore=154.8491;InbreedingCoeff=0.9631;MQ=89.05;MQ0=0;MQRankSum=-11.062;QD=55.77;ReadPosRankSum=-0.833;VQSLOD=4.7149;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,136,4836	0/0:10,0:10:30.10:0,30,1169	0/0:23,0:23:66.23:0,66,2515	0/0:28,0:28:73.08:0,73,2206	1/1:5,11:16:27.03:662,27,0	0/0:18,0:18:54.17:0,54,2026	0/0:45,0:45:99:0,135,5289	0/0:22,0:22:57.20:0,57,2137	0/0:16,0:16:48.16:0,48,1909	0/0:25,0:25:75.26:0,75,2953	0/0:11,0:11:24.08:0,24,933	0/0:29,0:29:84.29:0,84,3348	0/0:21,0:21:63.22:0,63,2359	0/0:18,0:18:54.19:0,54,2206	1/1:2,20:22:48.16:1293,48,0	1/1:2,16:18:39.13:1051,39,0	0/0:53,0:53:99:0,154,6125	0/0:25,0:25:72.20:0,72,2692	0/0:22,0:22:66.22:0,66,2366	0/0:17,0:17:51.16:0,51,1788	0/0:31,0:31:90.27:0,90,3406	1/1:2,17:19:36.12:938,36,0	0/0:17,0:17:45.15:0,45,1709	0/0:36,0:35:99:0,108,4424	0/0:19,0:19:57.19:0,57,2168	1/1:4,19:23:57.20:1497,57,0	0/0:20,0:20:54.19:0,54,2140	1/1:0,1:1:3.01:81,3,0
chr10	103761548	.	C	CG	7993.76	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-2.944;DP=580;FS=4.400;HRun=0;HaplotypeScore=81.3835;InbreedingCoeff=0.9987;MQ=92.35;MQ0=0;MQRankSum=-8.018;QD=37.53;ReadPosRankSum=0.356;VQSLOD=4.9281;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,150,2028	0/0:7,0:7:21.07:0,21,293	0/0:22,0:22:57.14:0,57,744	0/0:31,0:31:87.18:0,87,1136	1/1:2,12:15:28.21:287,28,0	0/0:13,0:13:39.13:0,39,545	0/0:28,0:28:81.26:0,81,1115	1/1:1,29:30:81.28:1271,81,0	0/0:26,0:26:78.26:0,78,1090	0/0:23,0:23:66.22:0,66,917	0/0:11,0:11:33.11:0,33,460	0/0:29,0:29:87.29:0,87,1216	0/0:18,0:18:51.17:0,51,706	0/0:20,0:20:60.20:0,60,837	1/1:1,15:18:47.91:554,48,0	1/1:1,21:25:69.09:790,69,0	0/0:18,0:18:54.18:0,54,755	0/0:21,0:21:63.19:0,63,858	1/1:1,22:23:63.18:957,63,0	1/1:0,18:18:51.17:814,51,0	1/1:0,30:30:78:1245,78,0	1/1:0,10:10:27.96:310,28,0	0/0:16,0:16:39.13:0,39,545	0/0:20,1:21:28.82:0,29,805	0/0:11,0:11:33.10:0,33,445	1/1:0,12:12:36.09:461,36,0	1/1:0,24:24:63.21:1005,63,0	1/1:0,8:8:24.07:298,24,0
chr10	103761549	.	T	TTCCAC	5978.72	PASS	AB=0.955;AC=13;AF=0.232;AN=56;BaseQRankSum=6.861;DP=589;FS=2.048;HRun=0;HaplotypeScore=140.3020;InbreedingCoeff=0.8986;MQ=91.61;MQ0=0;MQRankSum=-12.609;QD=50.24;ReadPosRankSum=0.526;VQSLOD=5.3646;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,135,2700	0/0:7,0:7:18.06:0,18,361	0/0:21,0:21:48.13:0,48,848	0/0:32,0:32:75.26:0,75,1469	1/1:8,7:15:33.09:696,33,0	0/0:13,0:13:36.12:0,36,725	0/0:29,0:29:75.23:0,75,1420	0/0:32,0:32:62.83:0,63,738	0/0:26,0:26:78.25:0,78,1532	0/0:23,0:23:63.18:0,63,1224	0/0:11,0:11:30.10:0,30,604	0/0:30,0:30:75.26:0,75,1500	0/0:19,0:19:51.13:0,51,984	0/0:20,0:20:60.19:0,60,1172	1/1:8,12:20:51.16:1241,51,0	1/1:5,21:26:72.25:1851,72,0	0/0:18,0:18:48.16:0,48,966	0/0:20,0:20:48.16:0,48,966	0/0:21,0:21:60.17:0,60,737	0/0:18,0:18:48.10:0,48,568	0/0:29,0:29:66.68:0,67,817	1/1:4,7:11:30.10:764,30,0	0/0:16,0:16:48.14:0,48,864	0/1:20,1:21:19.57:20,0,1030	0/0:10,0:10:27.09:0,27,544	1/1:9,7:16:30.10:703,30,0	0/0:24,0:24:57.17:0,57,702	1/1:3,7:10:27.09:705,27,0
chr10	103761914	.	C	CTG	2540.35	PASS	AB=0.621;AC=10;AF=0.179;AN=56;BaseQRankSum=-8.469;DP=679;FS=4.757;HRun=0;HaplotypeScore=89.9711;InbreedingCoeff=0.7397;MQ=75.70;MQ0=1;MQRankSum=-1.645;QD=25.15;ReadPosRankSum=-0.070;VQSLOD=4.2918;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:96.30:0,96,1173	0/0:7,0:7:15.05:0,15,183	0/0:24,0:20:19.30:0,19,219	0/0:33,0:31:54.20:0,54,569	1/1:6,6:13:18.06:292,18,0	0/0:21,0:21:42.13:0,42,513	0/0:25,0:27:62.84:0,63,711	0/0:27,0:27:66.20:0,66,795	0/0:22,0:22:45.14:0,45,550	0/0:23,0:23:54.17:0,54,658	0/0:11,0:12:32.94:0,33,381	0/0:36,0:37:87.09:0,87,1028	0/0:29,0:30:69.05:0,69,820	0/0:28,0:28:75.23:0,75,917	1/1:4,19:23:45.02:730,45,0	0/1:2,12:15:37.23:450,0,37	0/0:31,0:31:52.75:0,53,789	0/0:33,0:34:60.17:0,60,930	0/0:28,0:28:54.17:0,54,658	0/0:13,0:13:21.07:0,21,257	0/0:54,0:54:99:0,108,1305	0/1:7,4:12:18.61:224,0,19	0/0:19,0:20:53.84:0,54,635	0/0:40,0:40:99:0,111,1318	0/0:7,0:7:15.05:0,15,183	1/1:10,18:28:54.14:816,54,0	0/0:21,0:21:60.19:0,60,733	1/1:4,5:9:12.04:195,12,0
chr10	103762297	.	AC	A	4418.06	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.235;DP=696;FS=1.211;HRun=2;HaplotypeScore=72.5487;InbreedingCoeff=0.9995;MQ=83.68;MQ0=0;MQRankSum=-0.939;QD=34.79;ReadPosRankSum=-2.417;VQSLOD=4.2613;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,154,2292	0/0:8,0:8:24.06:0,24,339	0/0:21,0:21:63.21:0,63,929	0/0:20,0:20:60.20:0,60,875	0/0:21,0:21:60.20:0,60,899	0/0:21,0:21:60.20:0,60,899	0/0:45,0:45:99:0,135,2001	1/1:0,28:28:84.25:1065,84,0	0/0:19,0:19:57.19:0,57,854	0/0:27,0:27:78.26:0,78,1169	0/0:18,0:18:51.17:0,51,764	0/0:29,0:29:87.29:0,87,1304	0/0:31,0:31:93.32:0,93,1392	0/0:25,0:25:72.24:0,72,1079	0/0:21,0:21:60.20:0,60,899	0/0:20,0:19:60.20:0,60,898	0/0:36,0:36:99:0,102,1502	0/0:17,0:17:51.17:0,51,764	1/1:1,19:20:57.18:731,57,0	1/1:3,18:21:48.05:584,48,0	1/1:0,29:29:78.20:993,78,0	0/0:18,0:18:54.18:0,54,808	0/0:27,0:27:81.27:0,81,1212	0/0:27,0:27:78.25:0,78,1150	0/0:31,0:31:93.32:0,93,1393	0/0:23,0:23:69.23:0,69,1034	1/1:2,27:29:81.12:1046,81,0	0/0:12,0:12:36.12:0,36,535
chr10	103763188	.	G	GTCTCTCTGTC	3580.13	PASS	AB=0.560;AC=11;AF=0.196;AN=56;BaseQRankSum=3.795;DP=693;FS=1.308;HRun=0;HaplotypeScore=193.3782;InbreedingCoeff=0.7972;MQ=58.03;MQ0=12;MQRankSum=-6.910;QD=26.32;ReadPosRankSum=-1.793;VQSLOD=2.6469;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,99,2485	0/0:15,0:15:36.02:0,36,879	0/0:23,0:11:6.01:0,6,99	0/0:31,0:20:27.07:0,27,423	1/1:2,23:26:5.21:134,5,0	0/0:23,0:22:57.19:0,57,1446	0/0:29,0:28:66.22:0,66,1554	0/0:44,0:42:69.68:0,70,1425	0/0:17,0:17:42.09:0,42,1037	0/0:27,0:27:63.22:0,63,1761	0/0:11,0:11:30.08:0,30,713	0/0:24,0:24:57.14:0,57,1493	0/0:20,0:20:36.08:0,36,975	0/0:28,0:28:75.26:0,75,2001	1/1:19,0:18:11.18:371,11,0	1/1:1,25:26:18.06:560,18,0	0/0:27,0:27:69.24:0,69,1954	0/0:17,0:17:45.08:0,45,1082	0/0:27,0:26:50.99:0,51,1098	0/0:18,0:18:54.18:0,54,1541	0/0:42,0:40:93.21:0,93,2222	1/1:6,18:24:15.05:409,15,0	0/0:15,0:15:36.12:0,36,978	0/0:39,0:39:93.29:0,93,2476	0/0:15,0:15:36.12:0,36,965	0/1:6,21:28:26.63:1845,0,27	0/0:26,0:26:72.23:0,72,2006	1/1:10,3:12:6.02:262,6,0
chr10	103763806	.	AT	A	3778.26	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.022;DP=645;FS=13.099;HRun=6;HaplotypeScore=72.8266;InbreedingCoeff=0.9961;MQ=84.03;MQ0=0;MQRankSum=-1.496;QD=25.53;ReadPosRankSum=-1.248;VQSLOD=2.3071;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,105,1366	0/0:10,0:10:30.10:0,30,394	0/0:20,0:20:42.09:0,42,515	0/0:18,0:18:42.13:0,42,514	0/0:27,0:27:72.23:0,72,946	0/0:24,0:24:72.23:0,72,947	0/0:24,0:24:72.22:0,72,933	1/1:2,23:25:66.14:698,66,0	0/0:19,0:19:51.06:0,51,642	0/0:34,0:34:96.31:0,96,1263	0/0:18,0:18:51.16:0,51,657	0/0:21,0:21:54.18:0,54,709	0/0:24,0:24:66.19:0,66,840	0/0:20,0:20:60.17:0,60,758	0/0:31,0:31:87.26:0,87,1118	0/0:24,0:24:60.20:0,60,789	0/0:17,0:17:45.13:0,45,577	0/0:15,0:15:36.03:0,36,435	1/1:6,17:22:48.12:516,48,0	1/1:5,29:34:81.13:856,81,0	1/1:0,26:26:71.93:774,72,0	0/0:29,0:29:78.24:0,78,1013	0/0:19,0:19:54.18:0,54,707	0/0:18,0:18:54.17:0,54,697	0/0:16,0:16:45.10:0,45,559	0/0:23,0:23:69.17:0,69,887	1/1:2,38:40:87.22:935,87,0	0/0:7,0:7:15.05:0,15,197
chr10	103765383	.	G	GGTGT	4759.62	PASS	AB=0.832;AC=21;AF=0.389;AN=54;BaseQRankSum=-2.216;DP=780;FS=0.445;HRun=0;HaplotypeScore=158.7661;InbreedingCoeff=0.7744;MQ=69.48;MQ0=8;MQRankSum=-1.301;QD=15.16;ReadPosRankSum=-3.634;VQSLOD=4.0353;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:50:84.02:0,84,1285	0/0:14,0:14:21.07:0,21,321	./.	0/0:45,0:31:2.92:0,3,17	1/1:14,11:26:17.74:432,18,0	0/0:27,0:28:44.60:0,45,795	0/0:19,0:20:4.98:0,5,322	1/1:34,0:31:40.69:426,41,0	0/0:28,0:31:49.68:0,50,886	0/0:36,0:36:10.52:0,11,757	0/0:13,0:13:21.07:0,21,334	0/0:31,0:35:69.05:0,69,1031	0/1:30,0:32:6.43:6,0,784	0/0:20,0:20:29.84:0,30,468	0/1:16,16:35:0.10:927,0,0	1/1:11,17:36:41.61:890,42,0	0/0:22,0:22:31.13:0,31,645	0/0:26,0:29:47.60:0,48,663	1/1:19,0:16:6.83:43,7,0	1/1:14,0:14:2.99:24,3,0	0/1:25,0:27:0:0,0,0	1/1:11,17:31:17.63:432,18,0	0/0:27,0:30:57.16:0,57,830	0/0:34,0:35:57.19:0,57,877	0/0:23,0:25:35.54:0,36,641	1/1:15,13:32:57.76:1013,58,0	1/1:16,0:16:16.03:193,16,0	1/1:1,8:10:17.85:373,18,0
chr10	103766830	.	ACGCGCG	A	2164.12	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=3.173;DP=443;FS=2.194;HRun=0;HaplotypeScore=106.6738;InbreedingCoeff=0.7782;MQ=73.20;MQ0=7;MQRankSum=-3.691;QD=22.08;ReadPosRankSum=0.839;VQSLOD=3.5211;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,2536	0/0:6,0:6:18.06:0,18,480	0/0:14,0:8:9.86:0,10,118	0/1:15,0:12:13.07:13,0,85	0/0:3,0:11:3:0,3,25	0/0:20,0:20:48.16:0,48,1359	0/0:30,0:30:69.02:0,69,1791	1/1:4,10:13:30.06:515,30,0	0/0:13,0:13:33.11:0,33,907	0/0:16,0:16:45.14:0,45,1002	0/0:11,0:9:20.95:0,21,344	0/0:11,0:11:33.10:0,33,825	0/0:11,0:10:29.82:0,30,707	0/0:15,0:15:33.11:0,33,847	0/0:13,0:12:2.96:0,3,19	0/0:10,0:10:9.02:0,9,143	0/0:25,0:25:48.15:0,48,1247	0/0:20,0:20:48.16:0,48,1321	1/1:10,5:15:27.09:592,27,0	1/1:5,4:9:9.03:207,9,0	1/1:20,7:26:12.04:239,12,0	0/0:14,0:12:23.79:0,24,199	0/0:9,0:9:24.08:0,24,711	0/0:27,0:27:73.09:0,73,2087	0/0:18,0:18:45.14:0,45,1139	0/0:12,0:12:28.27:0,28,363	1/1:7,10:17:36.08:766,36,0	./.
chr10	103766832	.	GCGCGCGCA	G	1994.79	PASS	AB=0.929;AC=11;AF=0.204;AN=54;BaseQRankSum=4.309;DP=444;FS=3.090;HRun=0;HaplotypeScore=119.9734;InbreedingCoeff=0.7791;MQ=68.84;MQ0=11;MQRankSum=-4.416;QD=22.41;ReadPosRankSum=0.948;VQSLOD=2.6654;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:99:0,105,3053	0/0:8,0:8:24.08:0,24,670	0/0:13,0:6:9.86:0,10,118	0/1:12,0:10:13.07:13,0,85	0/0:10,0:10:3:0,3,25	0/0:21,0:21:51.18:0,51,1629	0/0:30,0:30:76.03:0,76,2172	1/1:12,0:11:28.31:478,28,0	0/0:12,0:12:33.11:0,33,1057	0/0:17,0:17:47.27:0,47,1190	0/0:12,0:10:20.95:0,21,404	0/0:12,0:12:36.11:0,36,1021	0/0:12,0:11:32.83:0,33,865	0/0:15,0:15:33.11:0,33,943	0/0:12,0:11:2.96:0,3,19	0/0:9,0:9:9.02:0,9,154	0/0:26,0:25:52.05:0,52,1541	0/0:21,0:21:48.16:0,48,1516	1/1:12,1:12:27.09:551,27,0	1/1:7,1:8:9.03:188,9,0	1/1:23,3:25:11.78:182,12,0	0/0:14,0:12:23.79:0,24,199	0/0:10,0:10:27.09:0,27,941	0/0:29,0:28:76.10:0,76,2593	0/0:18,0:17:45.14:0,45,1284	0/0:12,0:12:28.27:0,28,435	1/1:17,0:17:36.08:752,36,0	./.
chr10	103766836	.	G	GCACACACACACA	313.51	PASS	AB=1.000;AC=7;AF=0.135;AN=52;BaseQRankSum=2.808;DP=453;FS=0.000;HRun=0;HaplotypeScore=162.5784;InbreedingCoeff=0.3742;MQ=63.77;MQ0=17;MQRankSum=0.341;QD=4.13;ReadPosRankSum=-2.211;VQSLOD=2.3438;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:90.56:0,91,1845	0/0:8,0:8:24:0,24,480	0/0:12,0:5:0.90:0,1,22	0/0:10,0:7:2.24:0,2,60	./.	0/0:23,0:23:52.68:0,53,1236	0/0:31,0:30:72.15:0,72,1553	0/1:11,0:10:7.99:46,0,8	0/0:14,0:14:39.10:0,39,760	0/0:19,0:19:50.85:0,51,885	0/0:13,0:11:16.29:0,16,251	0/0:12,0:12:30.02:0,30,744	0/0:13,0:12:30.56:0,31,731	0/0:16,0:16:32.89:0,33,686	0/0:4,7:11:1.72:0,2,4	0/0:4,0:9:3.01:0,3,111	0/1:28,0:27:8.41:8,0,1127	0/0:22,0:21:48.11:0,48,1184	0/1:12,0:11:21.73:52,0,22	0/0:11,0:10:6.07:0,6,36	0/0:25,0:24:5.27:0,5,36	1/1:14,0:12:13.84:105,14,0	0/0:11,0:10:27.01:0,27,766	0/0:29,0:28:67.11:0,67,2086	0/0:18,0:17:45.07:0,45,969	1/1:4,0:11:12.90:232,13,0	0/0:16,0:16:20.69:0,21,297	./.
chr10	103766838	.	GCA	G	252.36	PASS	AB=0.975;AC=18;AF=0.391;AN=46;BaseQRankSum=0.972;DP=456;FS=1.491;HRun=0;HaplotypeScore=85.9974;InbreedingCoeff=-0.2111;MQ=61.74;MQ0=20;MQRankSum=1.087;QD=0.98;ReadPosRankSum=-0.853;VQSLOD=1.7451;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:37:72.35:72,0,376	0/1:8,0:8:32.08:32,0,52	./.	./.	./.	0/1:23,0:23:40.49:40,0,177	0/1:29,0:28:18.37:18,0,222	0/0:12,0:11:8.30:0,8,42	0/1:15,0:15:35.98:36,0,94	0/1:21,0:21:36.15:36,0,91	0/0:13,0:11:6.01:0,6,69	0/1:10,1:11:15.51:16,0,127	0/1:14,0:13:17.50:17,0,121	0/0:16,0:15:8.75:0,9,120	0/1:11,0:10:0:0,0,0	1/1:8,1:8:3.01:34,3,0	0/0:21,6:26:2.53:0,3,243	0/1:16,6:21:6.58:7,0,224	0/1:11,0:10:2.92:3,0,5	1/1:11,0:10:1.25:3,1,0	0/0:31,0:29:0.52:0,1,3	./.	0/0:12,0:11:7.69:0,8,185	0/0:28,0:27:1.23:0,1,442	0/1:18,0:17:39.25:39,0,122	0/0:13,0:12:14.54:0,15,88	1/1:16,0:16:4.09:26,4,0	./.
chr10	103766873	.	CAGAGAGAGAGAGAGAGAGAGAG	C	970.78	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=1.581;DP=499;FS=0.000;HRun=0;HaplotypeScore=222.2408;InbreedingCoeff=0.6584;MQ=52.37;MQ0=25;MQRankSum=-4.612;QD=37.34;ReadPosRankSum=0.047;VQSLOD=2.4939;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:47:99:0,101,9383	0/0:7,0:7:21.07:0,21,1650	0/0:11,0:7:21.07:0,21,1578	0/0:14,0:6:12.93:0,13,915	1/1:7,0:5:1.25:3,1,0	0/0:18,0:18:36.12:0,36,3132	0/0:31,0:30:66.23:0,66,5841	0/0:14,0:13:0:0,0,0	0/0:16,0:16:42.14:0,42,3422	0/0:19,0:18:48.55:0,49,3859	0/0:16,0:14:30.10:0,30,2701	0/0:14,0:14:36.12:0,36,3240	0/0:17,0:16:42.62:0,43,3683	0/0:24,0:23:51.18:0,51,4465	0/0:9,0:8:6.49:0,6,550	0/0:11,0:8:12.04:0,12,1032	0/0:38,0:37:76.47:0,76,6355	0/0:26,0:25:57.20:0,57,4606	1/1:8,2:9:5.91:356,6,0	./.	0/0:17,9:23:3.01:0,3,227	0/0:11,0:11:3.01:0,3,64	0/0:17,0:16:42.14:0,42,3604	0/0:30,0:34:73.34:0,73,6048	0/0:19,0:18:45.15:0,45,4107	0/0:15,0:14:24.08:0,24,1862	1/1:5,4:9:12.04:718,12,0	0/0:4,0:3:6.02:0,6,402
chr10	103767561	.	A	AGGAGTCAG	15203.66	PASS	AB=0.800;AC=55;AF=0.982;AN=56;BaseQRankSum=0.622;DP=296;FS=7.733;HRun=0;HaplotypeScore=319.5321;InbreedingCoeff=-0.0422;MQ=51.66;MQ0=0;MQRankSum=-1.636;QD=51.36;ReadPosRankSum=1.005;VQSLOD=3.6399;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:15.05:398,15,0	1/1:6,0:6:3.01:102,3,0	1/1:1,1:4:11.97:377,12,0	0/1:3,0:3:7.52:155,0,8	1/1:8,0:8:9.02:185,9,0	1/1:12,0:12:12:352,12,0	1/1:14,0:14:30.08:883,30,0	1/1:13,0:13:33.09:838,33,0	1/1:12,0:12:30.10:938,30,0	1/1:12,0:12:26.43:740,26,0	1/1:10,0:10:12.04:320,12,0	1/1:12,0:12:29.79:852,30,0	1/1:14,0:14:25.90:807,26,0	1/1:15,0:15:36.12:1019,36,0	1/1:19,0:19:39.13:968,39,0	1/1:8,0:8:18.45:437,18,0	1/1:6,0:6:12:341,12,0	1/1:7,0:7:6:130,6,0	1/1:10,0:10:24.06:795,24,0	1/1:11,0:11:15.05:388,15,0	1/1:12,0:12:12.01:221,12,0	1/1:9,0:9:15.05:529,15,0	1/1:11,0:11:6.02:215,6,0	1/1:7,0:7:14.96:317,15,0	1/1:20,0:20:29.89:848,30,0	1/1:13,0:13:33.11:1166,33,0	1/1:13,0:13:18.06:574,18,0	1/1:4,0:4:9.03:306,9,0
chr10	103768404	.	TTTGC	T	9069.34	PASS	AB=0.511;AC=21;AF=0.375;AN=56;BaseQRankSum=19.113;DP=712;FS=5.338;HRun=0;HaplotypeScore=140.3153;InbreedingCoeff=0.9305;MQ=60.41;MQ0=0;MQRankSum=-16.014;QD=35.85;ReadPosRankSum=0.519;VQSLOD=4.3811;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,2501	0/0:11,0:11:30.10:0,30,777	0/0:28,0:26:56.72:0,57,1181	0/0:27,0:25:61.16:0,61,1270	1/1:1,14:15:39.02:612,39,0	0/0:23,0:23:60.12:0,60,1407	0/0:21,0:21:55.20:0,55,1030	1/1:3,25:28:72.05:1041,72,0	0/0:39,0:39:99:0,114,2552	0/0:35,0:35:98.98:0,99,2375	0/0:19,0:19:57.08:0,57,1357	0/0:21,0:21:57.10:0,57,1184	0/0:29,0:29:84.17:0,84,1754	0/0:19,0:19:57.15:0,57,1335	1/1:1,30:31:57.16:1026,57,0	1/1:2,37:39:78.27:1473,78,0	0/0:32,0:32:87.21:0,87,1977	0/0:20,0:20:54.09:0,54,1203	1/1:4,16:20:47.91:627,48,0	1/1:2,16:18:41.91:625,42,0	1/1:6,16:22:18.02:285,18,0	1/1:1,17:18:48.12:872,48,0	0/0:30,0:30:89.89:0,90,1943	0/0:49,0:49:99:0,99,3289	0/0:21,0:21:63.11:0,63,1251	0/1:1,23:24:8.74:1091,0,9	1/1:2,26:28:60.20:1115,60,0	1/1:1,9:10:18.03:304,18,0
chr10	103768668	.	ATG	A	7598.92	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.225;DP=741;FS=4.650;HRun=0;HaplotypeScore=127.2758;InbreedingCoeff=0.9946;MQ=73.63;MQ0=5;MQRankSum=-7.574;QD=29.92;ReadPosRankSum=-0.369;VQSLOD=6.6148;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:67,0:67:99:0,172,2769	0/0:15,0:15:42.13:0,42,675	0/0:25,1:26:17.93:0,18,806	0/0:24,0:22:34.74:0,35,694	1/1:4,22:26:60.19:768,60,0	0/0:20,0:20:60.21:0,60,1012	0/0:31,0:31:81.26:0,81,1333	1/1:3,21:24:63.18:784,63,0	0/0:33,0:33:81.28:0,81,1363	0/0:37,0:37:99:0,102,1710	0/0:23,0:23:66.23:0,66,1110	0/0:32,0:32:87.28:0,87,1439	0/0:21,0:21:54.13:0,54,830	0/0:26,0:26:66.23:0,66,1113	1/1:5,16:21:54.16:671,54,0	1/1:4,24:28:72.23:926,72,0	0/0:25,0:25:63.19:0,63,1022	0/0:32,0:32:78.27:0,78,1316	1/1:6,18:23:56.46:720,56,0	1/1:4,18:21:51.17:656,51,0	1/1:5,23:27:54.13:672,54,0	1/1:3,14:17:39.13:501,39,0	0/0:26,1:27:27.61:0,28,982	0/0:28,0:27:59.86:0,60,1011	0/0:20,0:20:45.15:0,45,736	1/1:8,19:27:12.57:705,13,0	1/1:4,23:26:66.21:848,66,0	1/1:1,9:10:27.09:347,27,0
chr10	103768716	.	ATGCCTGCCCC	A	16331.40	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=17.971;DP=665;FS=14.266;HRun=0;HaplotypeScore=239.6915;InbreedingCoeff=0.9986;MQ=85.74;MQ0=0;MQRankSum=-17.723;QD=77.03;ReadPosRankSum=1.523;VQSLOD=3.1097;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,151,7583	0/0:12,0:12:36.08:0,36,1643	0/0:31,0:31:93.29:0,93,4341	0/0:22,0:22:56.89:0,57,2738	1/1:3,12:15:27.09:894,27,0	0/0:20,0:20:60.20:0,60,2928	0/0:30,0:30:87.27:0,87,4165	1/1:8,14:22:51.16:1522,51,0	0/0:26,0:26:78.27:0,78,4029	0/0:37,0:37:99:0,105,5406	0/0:24,0:24:69.22:0,69,3429	0/0:27,0:27:78.24:0,78,3862	0/0:26,0:26:78.27:0,78,4155	0/0:29,0:29:87.30:0,87,4424	1/1:3,19:22:57.20:1883,57,0	1/1:3,26:29:75.26:2501,75,0	0/0:28,0:28:72.23:0,72,3484	0/0:25,0:25:63.64:0,64,2940	1/1:3,19:22:60.20:1880,60,0	1/1:2,14:16:42.14:1346,42,0	1/1:6,11:17:33.10:995,33,0	1/1:3,16:19:48.62:1520,49,0	0/0:18,0:18:51.18:0,51,2588	0/0:27,0:27:78.27:0,78,4064	0/0:18,0:18:48.16:0,48,2561	1/1:4,14:18:45.15:1453,45,0	1/1:3,21:24:57.20:1890,57,0	1/1:4,4:8:18.03:449,18,0
chr10	103769893	.	AT	A	186.57	PASS	AB=0.650;AC=16;AF=0.727;AN=22;BaseQRankSum=-1.893;DP=62;FS=6.640;HRun=1;HaplotypeScore=17.8768;InbreedingCoeff=0.2296;MQ=55.02;MQ0=7;MQRankSum=1.110;QD=5.04;ReadPosRankSum=1.240;VQSLOD=0.4994;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:3,0:3:5.78:0,6,78	0/0:3,0:1:2.22:0,2,7	./.	./.	1/1:2,1:3:3.01:40,3,0	./.	0/1:0,3:2:0:0,0,0	1/1:2,0:1:0.89:2,1,0	1/1:1,0:1:2.74:12,3,0	./.	./.	1/1:4,0:2:5.85:34,6,0	./.	./.	1/1:8,1:8:3.01:36,3,0	1/1:1,4:4:6.49:83,6,0	./.	./.	./.	./.	./.	./.	./.	0/1:3,1:3:12.24:32,0,12	./.	1/1:4,2:4:3.01:34,3,0
chr10	103770001	.	G	GA	795.89	PASS	AB=0.835;AC=9;AF=0.161;AN=56;BaseQRankSum=5.690;DP=719;FS=7.194;HRun=2;HaplotypeScore=63.7402;InbreedingCoeff=0.3043;MQ=35.88;MQ0=76;MQRankSum=0.675;QD=7.51;ReadPosRankSum=-2.716;VQSLOD=-0.3316;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:18:30.51:0,31,384	0/0:8,0:7:18.06:0,18,232	0/0:119,0:26:77.65:0,78,820	0/0:100,0:13:38.87:0,39,397	0/1:21,0:17:38.38:142,0,38	0/0:13,0:11:18.06:0,18,232	0/0:24,0:17:18.89:0,19,261	0/0:29,0:18:47.72:0,48,469	0/0:14,0:12:18.03:0,18,216	0/0:13,0:12:32.82:0,33,393	0/0:19,0:18:31.36:0,31,418	0/1:16,3:14:97.08:97,0,186	0/0:21,0:20:49.93:0,50,620	0/0:10,0:8:8.17:0,8,115	1/1:7,6:11:18.06:220,18,0	0/1:4,2:5:58.54:59,0,68	0/0:32,0:25:65.60:0,66,802	0/0:19,0:14:28.57:0,29,418	0/0:23,0:17:28.97:0,29,354	0/0:20,0:17:29.46:0,29,332	0/0:34,0:21:38.11:0,38,480	0/1:8,7:11:11.50:234,0,11	0/0:16,0:14:19.87:0,20,267	0/0:39,0:28:53.30:0,53,692	0/0:20,0:18:38.80:0,39,445	0/1:19,3:13:79.14:79,0,208	0/0:8,0:7:9.31:0,9,117	1/1:7,3:6:9.03:113,9,0
chr10	103770183	.	AT	A	1972.55	PASS	AB=0.800;AC=11;AF=0.196;AN=56;BaseQRankSum=8.408;DP=518;FS=11.802;HRun=10;HaplotypeScore=51.5592;InbreedingCoeff=0.8830;MQ=67.69;MQ0=0;MQRankSum=0.683;QD=16.44;ReadPosRankSum=-2.685;VQSLOD=2.1397;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.18:0,93,984	0/0:8,0:10:26.91:0,27,279	0/1:9,3:12:53.21:53,0,164	0/0:15,0:13:24:0,24,238	0/0:17,0:17:44.94:0,45,471	0/0:21,0:21:60.15:0,60,654	0/0:19,0:22:44.95:0,45,479	1/1:9,20:29:59.92:514,60,0	0/0:17,0:17:39.10:0,39,430	0/0:20,0:19:39.11:0,39,432	0/0:10,0:10:21.02:0,21,208	0/0:17,0:17:39.09:0,39,423	0/0:19,0:19:51.12:0,51,550	0/0:14,0:14:33.07:0,33,355	0/0:27,0:27:75.20:0,75,823	0/0:16,0:15:33.08:0,33,358	0/0:20,0:20:51.12:0,51,554	0/0:25,0:25:63.16:0,63,687	1/1:5,22:27:65.95:569,66,0	1/1:2,11:13:20.95:182,21,0	1/1:3,21:24:59.97:521,60,0	0/0:12,0:12:23.90:0,24,247	0/0:16,1:17:22.06:0,22,464	0/0:20,0:20:60.15:0,60,656	0/0:12,0:12:33.08:0,33,358	0/0:21,0:21:57.14:0,57,617	1/1:0,15:15:35.99:313,36,0	0/0:11,0:11:30.53:0,31,322
chr10	103773182	.	GCATGCACACACA	G	3058.13	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=7.617;DP=532;FS=7.595;HRun=0;HaplotypeScore=204.7921;InbreedingCoeff=0.7058;MQ=56.36;MQ0=24;MQRankSum=-5.935;QD=19.23;ReadPosRankSum=-0.272;VQSLOD=1.4859;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,106,3675	0/0:6,0:6:15.05:0,15,239	0/1:17,0:10:28.02:28,0,179	0/0:26,0:13:17.89:0,18,363	0/0:21,0:20:42.14:0,42,689	0/0:10,0:10:30.10:0,30,1191	0/0:25,0:25:66.50:0,66,1801	1/1:24,0:22:32.74:691,33,0	0/0:19,0:17:47.14:0,47,1409	0/0:15,0:15:42.06:0,42,1181	0/0:14,0:12:33.11:0,33,1220	0/0:26,0:26:75.26:0,75,2569	0/0:15,0:15:39.13:0,39,1359	0/0:19,0:19:57.18:0,57,1796	0/0:24,0:23:6.57:0,7,711	0/1:17,0:16:1.40:1,0,625	0/0:32,0:31:88.73:0,89,3274	0/0:17,0:14:35.55:0,36,1401	1/1:17,0:17:27.27:492,27,0	1/1:22,3:27:38.94:682,39,0	1/1:21,0:19:18.06:281,18,0	0/0:7,0:6:18.06:0,18,282	0/0:7,0:6:15.05:0,15,522	0/0:25,0:25:56.93:0,57,2264	0/0:19,0:18:39.12:0,39,1463	0/1:20,0:19:19.12:19,0,677	1/1:8,4:15:39.13:1043,39,0	0/0:4,0:4:12.04:0,12,207
chr10	103773184	.	ATG	A	2108.67	PASS	AB=0.842;AC=9;AF=0.161;AN=56;BaseQRankSum=6.533;DP=524;FS=10.639;HRun=0;HaplotypeScore=117.5894;InbreedingCoeff=0.6001;MQ=56.10;MQ0=25;MQRankSum=-3.016;QD=18.18;ReadPosRankSum=-0.300;VQSLOD=2.9153;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,104,1446	0/0:6,0:6:15.05:0,15,239	0/1:15,1:9:28.05:28,0,179	0/0:26,0:13:17.52:0,18,363	0/0:20,0:19:42.04:0,42,683	0/0:10,0:10:29.93:0,30,495	0/0:27,0:26:68.03:0,68,959	0/1:15,8:21:9.27:634,0,9	0/0:19,0:17:47.23:0,47,809	0/0:15,0:15:45.06:0,45,747	0/0:13,0:11:33.09:0,33,552	0/0:26,0:26:75.14:0,75,1210	0/0:14,0:14:39:0,39,615	0/0:20,0:20:57:0,57,873	0/0:24,0:23:50.92:0,51,826	0/0:16,0:15:42:0,42,637	0/0:32,0:31:86.39:0,86,1353	0/0:16,0:13:13.51:0,14,567	0/1:13,3:15:21.94:351,0,22	1/1:21,4:25:39.03:568,39,0	1/1:19,2:19:18.06:265,18,0	0/0:7,0:6:18.06:0,18,273	0/0:7,0:6:14.96:0,15,216	0/0:25,0:25:53.23:0,53,850	0/0:20,0:18:39:0,39,638	0/0:19,0:18:54.18:0,54,853	1/1:10,5:15:39.03:421,39,0	0/0:4,0:4:12.04:0,12,183
chr10	103773186	.	GCA	G	616.23	PASS	AB=0.919;AC=20;AF=0.435;AN=46;BaseQRankSum=4.355;DP=531;FS=0.677;HRun=0;HaplotypeScore=123.1250;InbreedingCoeff=-0.3188;MQ=54.98;MQ0=26;MQRankSum=-0.963;QD=1.77;ReadPosRankSum=3.283;VQSLOD=2.1168;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,4:43:99:173,0,424	./.	./.	0/0:25,0:12:0:0,0,0	0/0:18,0:19:2.74:0,3,12	0/1:9,1:10:11.67:12,0,224	0/1:26,1:27:75.17:75,0,234	0/0:23,0:21:12.88:0,13,68	0/0:18,0:16:12.67:0,13,181	0/1:17,0:17:29.57:30,0,126	0/1:14,0:12:6.16:6,0,205	0/1:23,1:25:39.75:40,0,297	0/1:17,0:17:1.49:1,0,387	0/1:18,1:19:19.70:20,0,245	0/0:19,0:22:2.64:0,3,36	1/1:15,0:15:0.47:1,0,0	0/1:31,2:33:68.76:69,0,512	0/1:15,1:13:26.73:27,0,223	0/1:13,0:14:7.65:17,0,8	1/1:22,0:25:2.42:13,2,0	./.	./.	0/1:6,1:7:35.58:36,0,36	0/1:19,5:25:99:102,0,319	0/1:17,3:19:9.17:9,0,245	0/0:19,0:18:17.42:0,17,106	1/1:15,0:15:22.42:118,22,0	./.
chr10	103773239	.	CCA	C	1956.09	PASS	AB=0.927;AC=12;AF=0.214;AN=56;BaseQRankSum=5.775;DP=662;FS=2.376;HRun=0;HaplotypeScore=129.5816;InbreedingCoeff=0.7950;MQ=51.93;MQ0=28;MQRankSum=0.722;QD=11.57;ReadPosRankSum=-0.311;VQSLOD=3.5890;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:38:60.19:0,60,954	0/0:7,0:7:15.05:0,15,245	0/0:34,0:9:27.04:0,27,351	0/0:46,0:11:23.05:0,23,234	0/0:4,0:24:32.57:0,33,293	0/0:19,0:19:43.03:0,43,680	0/0:28,0:29:48.16:0,48,782	1/1:16,10:19:30.08:357,30,0	0/0:19,0:19:11.71:0,12,692	0/0:22,0:20:48.13:0,48,742	0/0:16,0:16:30.10:0,30,484	0/0:24,0:23:51.17:0,51,831	0/0:19,0:19:37.36:0,37,566	0/0:28,0:28:66.20:0,66,1049	0/0:3,0:21:43.09:0,43,347	0/0:3,0:18:47.69:0,48,415	0/0:37,0:36:63.17:0,63,992	0/0:20,2:20:8.22:0,8,638	1/1:17,8:22:24.03:278,24,0	1/1:2,17:19:29.17:322,29,0	1/1:8,27:33:72.10:835,72,0	0/0:5,0:9:12.47:0,12,106	0/1:14,2:16:3.82:4,0,456	0/0:32,0:31:63.12:0,63,944	0/1:26,1:26:4.09:4,0,414	0/0:6,0:21:53.95:0,54,464	1/1:6,15:21:27.08:331,27,0	0/0:1,0:3:6:0,6,53
chr10	103773560	.	ATTAT	A	4938.98	PASS	AB=0.541;AC=11;AF=0.196;AN=56;BaseQRankSum=12.594;DP=550;FS=1.870;HRun=0;HaplotypeScore=91.1304;InbreedingCoeff=0.8799;MQ=77.74;MQ0=0;MQRankSum=-2.602;QD=42.21;ReadPosRankSum=2.446;VQSLOD=5.1669;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.22:0,63,1637	0/0:6,0:6:18.06:0,18,440	0/0:14,0:14:18.09:0,18,576	0/0:13,0:12:33.11:0,33,679	1/1:1,21:21:54.18:915,54,0	0/0:18,0:18:48.16:0,48,1219	0/0:13,0:13:36.12:0,36,933	0/0:31,0:31:81.28:0,81,2018	0/0:16,0:16:42.14:0,42,1061	0/0:30,0:30:90.31:0,90,2280	0/0:20,0:20:57.20:0,57,1427	0/0:21,0:21:60.18:0,60,1427	0/0:21,0:21:63.20:0,63,1510	0/0:17,0:17:45.15:0,45,1134	1/1:6,18:24:48.16:860,48,0	1/1:0,16:16:44.70:807,45,0	0/0:24,0:24:69.24:0,69,1733	0/0:17,0:17:45.15:0,45,1103	0/0:16,0:16:39.13:0,39,1012	0/0:26,0:26:63.22:0,63,1610	0/0:19,0:19:54.19:0,54,1403	1/1:0,16:16:42.10:721,42,0	0/0:25,0:25:69.22:0,69,1707	0/0:18,0:18:51.18:0,51,1275	0/0:22,0:22:57.18:0,57,1400	0/1:5,28:33:85.65:1367,0,86	0/0:23,0:23:69.24:0,69,1678	1/1:1,5:6:15.05:270,15,0
chr10	103776225	.	GTCA	G	5795.57	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.357;DP=598;FS=0.368;HRun=0;HaplotypeScore=131.2999;InbreedingCoeff=0.9823;MQ=83.30;MQ0=0;MQRankSum=-15.773;QD=41.40;ReadPosRankSum=3.145;VQSLOD=6.2142;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,190,4599	0/0:12,0:12:36.12:0,36,820	0/0:31,0:31:88.06:0,88,2041	0/0:29,0:29:77.73:0,78,1706	1/1:1,10:11:24.08:368,24,0	0/0:25,0:25:72.25:0,72,1752	0/0:36,0:36:99:0,108,2649	1/1:2,11:13:33.11:549,33,0	0/0:39,0:39:99:0,117,2884	0/0:25,0:25:75.26:0,75,1849	0/0:16,0:16:48.16:0,48,1135	0/0:27,0:27:81.28:0,81,1936	0/0:23,0:23:69.24:0,69,1699	0/0:20,0:20:57.20:0,57,1354	1/1:1,17:18:54.16:870,54,0	1/1:3,17:19:54.17:858,54,0	0/0:18,0:18:54.19:0,54,1330	0/0:24,0:24:69.24:0,69,1690	1/1:0,4:4:9.03:150,9,0	1/1:0,9:9:24.08:399,24,0	1/1:2,20:22:42.53:699,43,0	1/1:0,11:11:24.08:399,24,0	0/0:15,0:15:41.99:0,42,1035	0/0:28,0:28:84.29:0,84,2071	0/0:27,0:27:81.28:0,81,1972	1/1:0,12:12:36.12:598,36,0	1/1:3,14:17:50.50:754,51,0	1/1:0,3:3:9.03:150,9,0
chr10	103776229	.	A	AGG	3065.55	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.827;DP=613;FS=0.362;HRun=0;HaplotypeScore=132.2966;InbreedingCoeff=0.9923;MQ=82.11;MQ0=1;MQRankSum=-15.052;QD=21.29;ReadPosRankSum=2.430;VQSLOD=4.2551;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,190,3052	0/0:11,0:11:33.11:0,33,538	0/0:35,0:34:99:0,99,1500	0/0:30,0:28:74.28:0,74,1106	1/1:10,0:10:23.90:236,24,0	0/0:25,0:25:69.24:0,69,1125	0/0:35,0:35:99:0,102,1657	1/1:11,0:11:32.92:265,33,0	0/0:40,0:40:99:0,117,1900	0/0:28,0:28:81.27:0,81,1299	0/0:18,0:18:54.18:0,54,878	0/0:26,0:26:78.25:0,78,1248	0/0:24,0:24:67.11:0,67,1078	0/0:19,0:19:57.16:0,57,900	1/1:18,1:19:55.72:439,56,0	1/1:17,3:19:56.79:537,57,0	0/0:19,0:19:57.17:0,57,903	0/0:25,0:25:69.24:0,69,1111	1/1:4,0:4:11.99:106,12,0	1/1:11,0:11:25.87:189,26,0	1/1:20,2:22:41.41:345,41,0	1/1:11,0:11:23.91:211,24,0	0/0:15,0:15:42.61:0,43,686	0/0:29,0:29:87.30:0,87,1413	0/0:27,0:27:81.28:0,81,1322	1/1:12,0:12:35.84:273,36,0	1/1:15,3:18:52.47:504,52,0	1/1:3,3:6:15:184,15,0
chr10	103776388	.	TAC	T	1015.69	PASS	AB=0.907;AC=27;AF=0.540;AN=50;BaseQRankSum=4.639;DP=635;FS=13.916;HRun=0;HaplotypeScore=89.0433;InbreedingCoeff=-0.3433;MQ=62.99;MQ0=21;MQRankSum=0.951;QD=2.20;ReadPosRankSum=-0.877;VQSLOD=0.8906;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:32:7.40:7,0,263	0/0:8,0:9:5.99:0,6,50	./.	./.	1/1:11,8:20:11.78:123,12,0	0/0:14,0:14:3.36:0,3,211	0/1:24,4:28:45.95:46,0,132	./.	0/1:17,4:20:13.92:14,0,196	0/1:27,0:29:44.43:44,0,95	0/1:11,5:15:40.53:41,0,63	0/0:25,0:24:0.25:0,0,253	0/1:15,1:16:30.11:30,0,38	0/1:13,0:12:18.35:18,0,38	1/1:19,4:26:29.90:253,30,0	1/1:8,4:12:9.02:96,9,0	0/1:25,1:25:15.62:16,0,383	0/1:20,1:21:11.14:11,0,180	1/1:16,1:17:9:83,9,0	1/1:10,6:17:8.86:78,9,0	0/1:39,11:51:18.22:37,0,18	1/1:18,6:24:3.01:32,3,0	0/1:15,0:15:23.42:23,0,157	0/1:32,0:32:46.10:46,0,302	0/0:17,0:17:4.80:0,5,62	0/1:19,0:19:43.59:55,0,44	0/1:11,4:13:33.35:54,0,33	0/1:7,2:8:33.29:57,0,33
chr10	103777090	.	T	TG	14408.98	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=11.186;DP=810;FS=7.622;HRun=0;HaplotypeScore=123.2638;InbreedingCoeff=1.0000;MQ=82.54;MQ0=0;MQRankSum=-3.499;QD=41.64;ReadPosRankSum=0.675;VQSLOD=3.7657;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,171,2298	0/0:14,0:14:39.13:0,39,544	0/0:27,0:27:81.23:0,81,1070	0/0:28,0:28:63.20:0,63,865	1/1:0,27:27:60.20:959,60,0	0/0:22,0:21:57.19:0,57,796	0/0:30,0:30:84.19:0,84,1099	1/1:3,46:49:99:2248,141,0	0/0:27,0:27:75.23:0,75,1030	0/0:30,0:30:87.29:0,87,1209	0/0:21,0:21:63.21:0,63,881	0/0:32,0:32:87.29:0,87,1216	0/0:33,0:33:90.27:0,90,1223	0/0:15,0:15:39.10:0,39,509	1/1:2,34:36:90.31:1437,90,0	1/1:2,28:30:36.41:1155,36,0	0/0:25,0:25:72.24:0,72,1007	0/0:21,0:21:60.20:0,60,834	1/1:1,29:30:90.26:1410,90,0	1/1:1,23:24:69.24:1101,69,0	1/1:0,56:56:99:2446,154,0	1/1:0,26:26:51.16:815,51,0	0/0:28,0:28:60.20:0,60,839	0/0:22,0:22:57.19:0,57,797	0/0:26,0:26:72.24:0,72,1007	1/1:1,30:32:51.33:1363,51,0	1/1:2,19:21:54.18:852,54,0	1/1:0,15:15:39.13:623,39,0
chr10	103777260	.	T	TTTCATTTCT	2187.87	PASS	AB=0.800;AC=33;AF=0.971;AN=34;BaseQRankSum=-2.862;DP=38;FS=2.537;HRun=0;HaplotypeScore=22.0952;InbreedingCoeff=-0.1637;MQ=136.80;MQ0=0;MQRankSum=-2.118;QD=59.13;ReadPosRankSum=-1.202;VQSLOD=2.4932;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:6.02:165,6,0	./.	1/1:2,2:6:17.98:721,18,0	0/1:3,0:4:51.58:72,0,52	1/1:1,0:1:3.01:76,3,0	./.	./.	1/1:3,0:3:5.99:51,6,0	1/1:2,0:2:5.99:62,6,0	1/1:2,0:2:6.02:85,6,0	./.	1/1:1,0:1:3.01:108,3,0	1/1:1,0:1:3.01:107,3,0	./.	1/1:2,0:2:5.99:62,6,0	1/1:1,0:1:3.01:42,3,0	./.	./.	./.	./.	1/1:1,0:1:3.01:44,3,0	1/1:5,0:5:15.02:306,15,0	1/1:2,0:2:6.01:66,6,0	./.	1/1:1,0:1:3.01:126,3,0	./.	1/1:2,0:2:6.01:139,6,0	1/1:1,0:1:3.01:42,3,0
chr10	103777468	.	CATTT	C	6344.66	PASS	AB=0.654;AC=20;AF=0.357;AN=56;BaseQRankSum=11.406;DP=718;FS=20.091;HRun=0;HaplotypeScore=180.2179;InbreedingCoeff=0.8287;MQ=69.96;MQ0=1;MQRankSum=-8.016;QD=24.69;ReadPosRankSum=-0.520;VQSLOD=3.3176;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:57.70:0,58,959	0/0:14,0:14:38.33:0,38,834	0/0:23,0:20:45.67:0,46,1198	0/0:25,0:24:68.11:0,68,1385	1/1:5,17:22:8.96:200,9,0	0/0:39,0:39:56.35:0,56,1534	0/0:17,0:17:47.32:0,47,663	0/1:12,13:23:53.38:683,0,53	0/0:30,0:30:80.44:0,80,1443	0/0:60,0:60:99:0,170,4060	0/0:27,0:27:74.50:0,75,1302	0/0:30,0:30:77.47:0,77,1151	0/0:41,0:41:72.96:0,73,1274	0/0:24,0:24:45.59:0,46,763	1/1:7,21:28:61.28:516,61,0	1/1:7,12:19:25.80:492,26,0	0/0:11,0:11:18.06:0,18,457	0/0:13,0:13:36.08:0,36,827	0/1:6,7:13:7.94:458,0,8	1/1:13,11:24:55.55:484,56,0	1/1:13,6:19:47.23:330,47,0	1/1:7,32:39:87.19:759,87,0	0/0:39,0:39:97.84:0,98,1629	0/0:13,0:13:26.90:0,27,393	0/0:28,0:28:72:0,72,1308	1/1:8,20:28:51.17:1268,51,0	1/1:14,22:36:44.09:1040,44,0	1/1:0,4:4:6.02:115,6,0
chr10	103777561	.	C	CACTT	3091.59	PASS	AB=0.864;AC=10;AF=0.179;AN=56;BaseQRankSum=15.005;DP=1029;FS=38.649;HRun=0;HaplotypeScore=249.6354;InbreedingCoeff=-0.2191;MQ=50.90;MQ0=12;MQRankSum=-12.436;QD=7.67;ReadPosRankSum=4.755;VQSLOD=1.2635;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:75.25:0,75,1415	0/1:14,1:15:15.32:15,0,787	0/0:27,0:16:39.12:0,39,744	0/0:27,0:16:47.97:0,48,748	0/1:28,2:30:99:126,0,1238	0/0:40,0:40:99:0,117,2274	0/0:25,0:25:25.20:0,25,1100	0/0:36,0:31:81.28:0,81,1608	0/0:41,0:41:99:0,120,2319	0/1:51,5:56:99:460,0,2393	0/0:27,2:29:10.06:0,10,1255	0/0:37,0:37:99:0,109,2050	0/0:49,0:49:99:0,144,2806	0/0:37,0:37:99:0,105,2044	0/0:43,0:43:99:0,120,2375	0/0:37,0:37:99:0,108,2109	0/0:33,0:33:98.93:0,99,1896	0/0:27,0:27:81.28:0,81,1594	0/0:16,0:16:48.15:0,48,891	0/1:43,9:51:99:331,0,2267	0/0:62,0:62:99:0,167,3205	0/1:39,8:46:99:353,0,1971	0/1:21,13:34:99:596,0,1032	0/0:27,0:27:69.24:0,69,1375	0/1:37,13:50:99:410,0,1774	0/1:39,12:50:99:689,0,1810	0/1:34,2:36:59.91:60,0,1580	0/1:27,5:32:99:196,0,1464
chr10	103780303	.	AGT	A	4748.39	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.261;DP=713;FS=2.145;HRun=0;HaplotypeScore=89.9094;InbreedingCoeff=0.9999;MQ=79.58;MQ0=0;MQRankSum=-0.411;QD=37.10;ReadPosRankSum=0.038;VQSLOD=6.9439;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,105,1805	0/0:13,0:13:36.12:0,36,616	0/0:34,0:34:77.04:0,77,1237	0/0:35,0:35:84.14:0,84,1308	0/0:25,0:25:72.25:0,72,1249	0/0:20,0:20:54.18:0,54,935	0/0:22,0:22:63.22:0,63,1104	1/1:1,20:21:57.19:771,57,0	0/0:30,0:30:87.30:0,87,1525	0/0:20,0:20:54.18:0,54,922	0/0:18,0:18:51.16:0,51,867	0/0:32,0:32:81.28:0,81,1411	0/0:37,0:37:99:0,99,1692	0/0:30,0:30:84.29:0,84,1466	0/0:16,0:16:42.14:0,42,736	0/0:30,0:30:87.30:0,87,1514	0/0:28,0:27:72.25:0,72,1258	0/0:24,0:24:63.22:0,63,1104	1/1:1,12:13:36.12:486,36,0	1/1:0,27:27:81.27:1096,81,0	1/1:2,46:48:99:1705,126,0	0/0:23,0:23:66.23:0,66,1156	0/0:23,0:23:54.18:0,54,942	0/0:25,0:25:63.22:0,63,1098	0/0:16,0:16:42.14:0,42,736	0/0:28,0:28:81.25:0,81,1380	1/1:1,18:19:51.17:690,51,0	0/0:16,0:16:48.16:0,48,841
chr10	103783478	.	A	ATCG	12654.08	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-10.848;DP=664;FS=5.963;HRun=0;HaplotypeScore=96.5195;InbreedingCoeff=0.9997;MQ=90.25;MQ0=0;MQRankSum=-5.097;QD=55.50;ReadPosRankSum=-2.164;VQSLOD=6.1218;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:99:0,135,2284	0/0:15,0:15:36.12:0,36,614	0/0:27,0:27:69.24:0,69,1162	0/0:27,0:27:69.20:0,69,1095	1/1:2,19:22:51.17:1128,51,0	0/0:16,0:16:45.15:0,45,767	0/0:22,0:22:66.21:0,66,1092	1/1:11,19:30:81.28:1751,81,0	0/0:16,0:16:48.16:0,48,819	0/0:19,0:19:54.18:0,54,893	0/0:15,0:15:36.12:0,36,614	0/0:27,0:27:81.26:0,81,1355	0/0:26,0:26:78.25:0,78,1296	0/0:32,0:32:90.29:0,90,1503	1/1:3,20:23:60.21:1379,60,0	1/1:1,18:19:57.20:1309,57,0	0/0:45,0:45:99:0,132,2159	0/0:36,0:36:99:0,108,1841	1/1:5,6:12:33.10:679,33,0	1/1:4,16:21:45.15:1023,45,0	1/1:5,33:39:90.17:2050,90,0	1/1:5,11:17:30.10:689,30,0	0/0:18,0:18:51.17:0,51,869	0/0:24,0:24:69.24:0,69,1174	0/0:22,0:22:66.23:0,66,1125	1/1:3,16:22:60.16:1265,60,0	1/1:0,13:13:29.77:691,30,0	1/1:0,10:10:30.10:689,30,0
chr10	103784218	.	CCACACACACA	C	3450.98	PASS	AB=0.814;AC=19;AF=0.365;AN=52;BaseQRankSum=6.627;DP=690;FS=11.806;HRun=0;HaplotypeScore=186.1464;InbreedingCoeff=0.6534;MQ=63.78;MQ0=27;MQRankSum=-9.102;QD=15.41;ReadPosRankSum=-0.811;VQSLOD=1.6066;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:42:63.17:0,63,1875	0/0:5,0:5:9.02:0,9,264	./.	./.	1/1:8,6:14:9.03:252,9,0	0/0:17,0:20:39.13:0,39,1552	0/0:22,0:26:42.58:0,43,1341	0/1:22,3:25:41.21:45,0,41	0/0:16,0:23:35.64:0,36,545	0/0:12,0:11:22.89:0,23,765	0/0:9,0:9:6.02:0,6,284	0/0:17,0:21:29.67:0,30,966	0/0:13,0:17:36.12:0,36,1592	0/0:11,0:15:18.06:0,18,780	0/1:17,7:27:0.41:540,0,0	1/1:13,9:23:30.57:869,31,0	0/0:29,0:30:42.14:0,42,1457	0/0:21,0:21:33.01:0,33,1156	1/1:13,1:14:2.44:88,2,0	1/1:12,6:19:9.03:247,9,0	1/1:31,0:29:2.99:24,3,0	1/1:14,13:28:24.08:691,24,0	0/0:12,0:15:21.45:0,21,755	0/0:45,0:46:84.19:0,84,3085	0/0:21,0:29:51.18:0,51,1803	0/1:14,1:18:99:110,0,245	1/1:10,7:17:18.53:514,19,0	1/1:6,0:7:3.01:70,3,0
chr10	103785746	.	GT	G	5200.75	PASS	AB=0.993;AC=51;AF=0.911;AN=56;BaseQRankSum=-1.164;DP=381;FS=1.052;HRun=1;HaplotypeScore=236.3857;InbreedingCoeff=0.0831;MQ=55.20;MQ0=0;MQRankSum=-0.647;QD=13.65;ReadPosRankSum=5.115;VQSLOD=4.5651;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,1:16:29.33:199,29,0	1/1:5,1:6:12.65:80,13,0	0/1:4,0:4:1.02:1,0,27	0/1:9,0:8:20.59:30,0,21	1/1:8,0:8:8.68:53,9,0	1/1:16,0:16:40.81:247,41,0	0/1:18,0:18:5.52:225,0,6	0/1:18,0:18:20.22:168,0,20	1/1:11,1:12:33.26:223,33,0	1/1:19,2:21:60.44:411,60,0	1/1:4,0:4:8.68:53,9,0	0/1:25,1:26:1.44:303,0,1	1/1:18,0:18:49.82:319,50,0	1/1:15,0:15:20.58:221,21,0	1/1:14,0:14:29.47:186,29,0	1/1:21,0:21:32.63:293,33,0	1/1:21,1:22:58.52:374,59,0	1/1:20,0:19:27.51:224,28,0	1/1:11,0:9:21:110,21,0	1/1:12,1:13:29.36:200,29,0	1/1:11,0:11:17.56:106,18,0	1/1:5,0:5:14.64:92,15,0	1/1:11,0:11:17.50:127,18,0	1/1:13,1:14:32.56:230,33,0	1/1:10,0:10:26.09:174,26,0	1/1:17,0:17:46.36:275,46,0	1/1:15,0:14:31.80:197,32,0	1/1:5,1:6:11.62:81,12,0
chr10	103785889	.	TGAGAGAGAGA	T	127.72	PASS	AB=0.962;AC=5;AF=0.104;AN=48;BaseQRankSum=1.659;DP=461;FS=16.790;HRun=0;HaplotypeScore=140.1498;InbreedingCoeff=0.0589;MQ=43.51;MQ0=16;MQRankSum=-0.599;QD=1.77;ReadPosRankSum=-1.641;VQSLOD=1.5942;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:14.11:0,14,1066	0/0:5,0:5:3.01:0,3,119	./.	./.	0/1:18,0:18:14.48:82,0,14	0/0:5,0:5:2.13:0,2,24	0/0:35,0:32:6.49:0,6,109	0/0:12,0:11:0:0,0,0	0/0:17,0:18:3.90:0,4,94	0/0:22,0:22:28.85:0,29,429	./.	0/0:12,0:12:16.60:0,17,284	0/0:15,0:15:5.95:0,6,75	0/0:23,0:21:18.53:0,19,467	1/1:14,4:18:0.05:1,0,0	0/0:17,0:17:6.39:0,6,77	0/0:19,0:18:24:0,24,582	0/0:5,0:4:9.03:0,9,311	0/1:12,0:13:47.06:65,0,47	0/0:14,1:17:2.03:0,2,5	./.	0/0:21,5:28:6.87:0,7,50	0/0:12,0:11:6.49:0,6,153	0/0:20,0:16:15.04:0,15,402	0/0:16,0:15:6.01:0,6,136	0/1:22,0:21:11.28:75,0,11	0/0:11,0:12:6.01:0,6,75	0/0:8,0:7:8.93:0,9,67
chr10	103786436	.	T	TACAC	790.66	PASS	AB=0.974;AC=17;AF=0.327;AN=52;BaseQRankSum=-3.321;DP=619;FS=4.618;HRun=0;HaplotypeScore=119.0690;InbreedingCoeff=0.3898;MQ=62.87;MQ0=16;MQRankSum=-0.627;QD=4.62;ReadPosRankSum=-0.009;VQSLOD=2.2585;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:8.61:0,9,298	0/0:8,0:8:5.99:0,6,68	./.	./.	1/1:13,4:17:3.01:70,3,0	0/0:25,0:27:0.09:0,0,236	0/0:29,0:32:23.39:0,23,324	0/0:15,0:14:2.96:0,3,19	0/0:26,0:26:23.85:0,24,327	1/1:18,0:18:1.36:3,1,0	0/1:18,0:18:35.85:37,0,36	0/0:17,0:17:3.01:0,3,34	0/0:22,0:21:12.03:0,12,170	0/0:21,0:22:18.05:0,18,254	1/1:12,6:20:2.84:70,3,0	1/1:11,10:21:12.04:277,12,0	0/0:30,0:31:40.84:0,41,466	0/0:13,0:14:14.91:0,15,160	1/1:11,0:11:2.60:10,3,0	0/0:7,0:14:18.49:0,18,168	0/0:31,0:36:5.76:0,6,149	1/1:12,0:18:2.06:11,2,0	0/1:16,0:15:49.30:49,0,160	0/0:36,0:42:39.44:0,39,599	0/0:12,0:14:6.01:0,6,74	1/1:19,0:18:21.92:301,22,0	0/0:6,0:10:7.96:0,8,62	0/1:11,1:12:33.84:114,0,34
chr10	103791454	.	TTTTATTTATTTATTTA	T	375.81	PASS	AC=4;AF=0.105;AN=38;BaseQRankSum=3.392;DP=274;FS=0.000;HRun=0;HaplotypeScore=112.8471;InbreedingCoeff=0.4527;MQ=75.95;MQ0=2;MQRankSum=-2.042;QD=17.90;ReadPosRankSum=0.258;VQSLOD=2.2265;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:45.63:0,46,3118	./.	./.	./.	./.	0/0:8,0:8:15.05:0,15,801	0/0:5,0:5:3.01:0,3,226	0/0:29,0:28:27.08:0,27,738	./.	0/0:8,0:8:6.02:0,6,263	0/0:5,0:5:6.02:0,6,453	0/0:6,0:6:15.05:0,15,941	0/0:7,0:7:3.01:0,3,227	0/0:9,0:11:9.03:0,9,516	./.	1/1:11,1:12:3.01:57,3,0	0/0:31,0:31:64.45:0,64,3868	0/0:13,0:13:27.09:0,27,1609	0/0:12,0:12:9.03:0,9,553	./.	0/0:5,0:5:5.99:0,6,173	./.	0/0:6,0:6:3:0,3,27	0/0:3,0:3:3.01:0,3,227	0/0:10,0:10:9.03:0,9,568	1/1:5,4:9:12.02:415,12,0	0/0:14,0:17:15.05:0,15,933	./.
chr10	103791787	.	TTA	T	482.10	PASS	AB=0.636;AC=4;AF=0.167;AN=24;BaseQRankSum=1.050;DP=114;FS=7.731;HRun=0;HaplotypeScore=17.8612;InbreedingCoeff=-0.0587;MQ=64.61;MQ0=2;MQRankSum=2.008;QD=10.04;ReadPosRankSum=1.345;VQSLOD=1.6320;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:3.01:0,3,46	0/0:1,0:2:3:0,3,26	./.	./.	./.	./.	./.	0/0:6,0:6:3.01:0,3,37	0/0:1,0:1:3.01:0,3,46	0/0:2,0:2:3.01:0,3,46	1/1:2,0:2:2.50:9,2,0	./.	./.	0/0:1,0:1:3.01:0,3,46	0/0:3,0:3:2.68:0,3,11	./.	0/1:9,19:29:6.98:348,0,7	0/1:9,8:17:99:207,0,108	./.	./.	./.	./.	./.	./.	0/0:1,0:1:3.01:0,3,46	./.	./.	0/0:3,0:4:2.96:0,3,19
chr10	103792095	.	T	TTTTG	3849.64	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-6.485;DP=694;FS=0.505;HRun=0;HaplotypeScore=111.8762;InbreedingCoeff=0.8861;MQ=73.81;MQ0=4;MQRankSum=-2.089;QD=30.31;ReadPosRankSum=-3.240;VQSLOD=3.0981;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:75.26:0,75,1201	0/0:9,0:9:6.02:0,6,97	0/0:42,0:34:2.61:0,3,380	0/0:42,0:36:38.73:0,39,599	0/0:17,0:17:42.09:0,42,621	0/0:27,0:27:63.20:0,63,989	0/0:25,0:25:51.14:0,51,772	1/1:27,11:38:39.12:891,39,0	0/0:29,0:29:72.23:0,72,1131	0/0:30,0:30:66.21:0,66,1021	0/0:12,0:12:27.09:0,27,431	0/0:22,0:22:42.13:0,42,650	0/0:14,0:14:36.12:0,36,578	0/0:27,0:27:72.25:0,72,1155	0/0:22,0:22:42.14:0,42,677	0/0:28,0:28:51.15:0,51,796	0/0:36,0:36:60.13:0,60,1210	0/0:28,0:28:2.04:0,2,589	1/1:15,4:22:26.90:462,27,0	1/1:2,14:16:39.13:849,39,0	1/1:9,14:23:27.09:650,27,0	0/0:23,0:23:63.11:0,63,926	0/0:21,0:21:45.11:0,45,693	0/0:31,0:31:69.22:0,69,1085	0/0:12,0:12:27.06:0,27,393	0/0:25,0:25:57.19:0,57,899	1/1:7,19:28:42.14:996,42,0	0/0:8,0:8:12.04:0,12,193
chr10	103793686	.	GTT	G	2424.35	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.111;DP=454;FS=14.177;HRun=8;HaplotypeScore=73.4523;InbreedingCoeff=0.9873;MQ=80.18;MQ0=3;MQRankSum=0.456;QD=26.64;ReadPosRankSum=2.953;VQSLOD=1.8968;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.22:0,66,1079	0/0:9,0:9:24.06:0,24,371	0/0:42,0:27:12.53:0,13,600	0/0:28,0:24:30.18:0,30,380	1/1:0,24:24:66.16:784,66,0	0/0:17,0:17:48.16:0,48,804	0/0:16,0:16:42.13:0,42,683	0/0:20,0:20:41.49:0,41,543	0/0:14,0:14:36.12:0,36,604	0/0:11,0:11:30.10:0,30,502	0/0:17,0:17:48.16:0,48,809	0/0:17,0:18:47.65:0,48,756	0/0:17,0:17:45.15:0,45,754	0/0:16,0:16:39.13:0,39,655	1/1:4,16:20:30.08:366,30,0	1/1:0,13:13:39.12:476,39,0	0/0:18,0:18:48.16:0,48,811	0/0:16,0:15:45.11:0,45,680	0/0:13,0:13:32.84:0,33,452	0/0:12,0:12:30.96:0,31,379	0/0:12,0:12:27:0,27,341	1/1:1,15:16:27.07:329,27,0	0/0:11,0:11:30.09:0,30,483	0/0:15,0:15:39.12:0,39,622	0/0:5,0:5:15.05:0,15,246	1/1:0,11:11:33.10:401,33,0	0/0:10,0:10:18.06:0,18,240	1/1:0,7:7:21.07:256,21,0
chr10	103793694	.	T	TG	993.09	PASS	AB=0.962;AC=11;AF=0.196;AN=56;BaseQRankSum=2.473;DP=445;FS=10.063;HRun=9;HaplotypeScore=73.3173;InbreedingCoeff=0.8534;MQ=84.24;MQ0=3;MQRankSum=0.430;QD=10.56;ReadPosRankSum=-3.714;VQSLOD=1.0124;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:56.95:0,57,485	0/0:9,0:9:26.92:0,27,222	0/0:50,0:31:11.08:0,11,171	0/1:24,0:20:4.25:4,0,103	0/0:26,0:26:57.72:0,58,315	0/0:17,0:17:44.95:0,45,382	0/0:14,0:14:38.98:0,39,335	1/1:4,12:16:35.93:346,36,0	0/0:13,0:13:26.96:0,27,230	0/0:10,0:10:23.99:0,24,208	0/0:17,0:17:47.97:0,48,410	0/0:18,0:18:44.85:0,45,377	0/0:16,0:16:38.97:0,39,334	0/0:13,0:13:32.99:0,33,286	0/0:17,0:17:31.67:0,32,166	0/0:13,0:13:37.38:0,37,194	0/0:16,0:16:41.98:0,42,364	0/0:13,0:13:26.99:0,27,234	1/1:5,7:12:4.48:193,4,0	1/1:3,12:15:29.89:301,30,0	1/1:5,7:13:15:152,15,0	0/0:18,0:18:31.82:0,32,178	0/0:13,0:13:35.82:0,36,292	0/0:13,0:13:29.95:0,30,251	0/0:5,0:5:9:0,9,78	0/0:11,0:11:28.78:0,29,150	1/1:1,12:13:15.03:163,15,0	0/0:7,0:7:20.13:0,20,104
chr10	103794139	.	TTA	T	1431.21	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=1.695;DP=303;FS=20.814;HRun=0;HaplotypeScore=50.9200;InbreedingCoeff=0.6681;MQ=64.17;MQ0=13;MQRankSum=0.020;QD=17.89;ReadPosRankSum=-1.034;VQSLOD=1.4666;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:36.07:0,36,452	0/0:3,0:3:6.02:0,6,91	0/0:20,0:11:29.71:0,30,498	0/1:28,0:12:5.90:6,0,179	0/0:10,0:10:30.01:0,30,372	0/0:14,0:14:38.82:0,39,390	0/0:16,0:16:48.07:0,48,644	1/1:0,16:15:42.14:646,42,0	0/0:8,0:7:20.09:0,20,251	0/0:3,0:3:9.03:0,9,142	0/0:3,0:2:5.99:0,6,60	0/0:11,0:11:33.02:0,33,411	0/0:13,0:13:32.29:0,32,366	0/0:9,0:9:21.05:0,21,252	0/0:9,0:9:26.10:0,26,271	0/0:7,0:7:20.54:0,21,253	0/0:18,0:17:24.71:0,25,449	0/0:13,0:13:0.31:0,0,388	1/1:0,12:12:33.10:469,33,0	1/1:3,0:3:9.02:118,9,0	1/1:9,0:9:21.07:313,21,0	0/0:3,0:3:2.98:0,3,21	0/0:4,0:3:3.01:0,3,39	0/0:20,0:20:26.86:0,27,337	0/0:12,0:12:36.10:0,36,504	0/0:3,0:2:6.02:0,6,96	1/1:1,11:11:2.59:39,3,0	0/0:8,0:8:23.85:0,24,304
chr10	103794608	.	TC	T	1752.38	PASS	AB=0.919;AC=16;AF=0.286;AN=56;BaseQRankSum=6.083;DP=474;FS=9.848;HRun=10;HaplotypeScore=61.5406;InbreedingCoeff=0.5049;MQ=76.20;MQ0=0;MQRankSum=-1.469;QD=8.63;ReadPosRankSum=2.000;VQSLOD=1.2367;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,1:36:66.53:0,67,677	0/0:2,0:2:3.01:0,3,33	0/0:21,0:20:8.48:0,8,274	0/0:22,0:20:22.83:0,23,224	0/0:4,0:12:14.65:0,15,106	0/1:21,3:24:4:4,0,403	0/1:18,2:20:1.02:1,0,417	1/1:4,7:11:20.96:180,21,0	0/0:14,0:14:33.09:0,33,365	0/0:13,0:13:21.05:0,21,226	0/1:9,1:10:5:5,0,178	0/0:16,0:16:39.10:0,39,424	0/0:9,0:9:15.04:0,15,166	0/0:19,0:19:42.09:0,42,449	0/0:3,0:10:14.27:0,14,92	0/0:4,0:15:8.82:0,9,73	0/0:22,2:24:28.06:0,28,518	0/0:22,1:23:34.08:0,34,586	1/1:8,16:24:47:396,47,0	1/1:7,10:17:29.97:259,30,0	1/1:2,23:26:62.02:526,62,0	0/1:16,0:16:1.48:1,0,200	0/1:17,2:19:32.66:33,0,336	0/0:19,0:19:48.12:0,48,524	0/1:8,1:9:8:8,0,140	0/0:6,0:9:11.97:0,12,96	1/1:5,22:27:32.83:514,33,0	0/0:2,0:7:2.84:0,3,14
chr10	103796598	.	TCACACACACA	T	2904.42	PASS	AB=0.784;AC=12;AF=0.214;AN=56;BaseQRankSum=8.022;DP=642;FS=0.605;HRun=0;HaplotypeScore=183.2910;InbreedingCoeff=0.6916;MQ=64.30;MQ0=25;MQRankSum=-2.624;QD=22.00;ReadPosRankSum=0.359;VQSLOD=3.0252;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:50.81:0,51,1766	0/0:7,0:7:18:0,18,347	0/0:44,0:25:2.98:0,3,22	0/0:40,0:20:5.80:0,6,58	0/1:10,9:18:21.03:270,0,21	0/0:20,0:19:30.05:0,30,908	0/0:30,0:30:42.57:0,43,1428	0/0:28,0:28:41.52:0,42,436	0/0:19,0:18:42.04:0,42,1136	0/1:21,0:24:22.34:22,0,1224	0/0:18,0:18:23.67:0,24,900	0/0:22,0:23:39.08:0,39,1071	0/0:16,0:17:30.06:0,30,985	0/0:21,0:22:45.03:0,45,1312	1/1:3,18:21:32.94:991,33,0	1/1:0,19:19:27.09:811,27,0	0/0:29,0:29:44.98:0,45,1286	0/0:21,0:20:40.24:0,40,1086	0/0:16,0:16:14.98:0,15,342	0/0:21,0:20:20.90:0,21,560	0/0:23,0:21:48.04:0,48,1069	1/1:12,11:24:15.83:279,16,0	0/0:23,0:22:45:0,45,1008	0/0:30,0:34:66.02:0,66,2461	0/0:15,0:16:30.09:0,30,953	1/1:12,11:22:33.34:613,33,0	0/0:17,0:16:42.02:0,42,1384	1/1:0,2:2:3.01:90,3,0
chr10	103797133	.	A	ACGCACAGC	4465.73	PASS	AB=0.606;AC=11;AF=0.196;AN=56;BaseQRankSum=-7.332;DP=474;FS=13.877;HRun=0;HaplotypeScore=130.6566;InbreedingCoeff=0.7915;MQ=84.11;MQ0=0;MQRankSum=-8.925;QD=61.17;ReadPosRankSum=-0.325;VQSLOD=3.8997;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:63.22:0,63,1645	0/0:2,0:2:6.02:0,6,160	0/0:17,0:17:29.73:0,30,638	0/0:15,0:15:18.03:0,18,328	1/1:9,2:13:2.94:126,3,0	0/0:14,0:14:30.10:0,30,798	0/0:29,0:29:75.24:0,75,1909	0/0:23,0:23:39.12:0,39,698	0/0:14,0:14:36.10:0,36,900	0/0:21,0:21:60.13:0,60,1458	0/0:9,0:9:15.05:0,15,370	0/0:11,0:11:27.09:0,27,711	0/0:15,0:15:36.12:0,36,957	0/0:13,0:13:36.12:0,36,957	1/1:4,13:17:36.08:1358,36,0	1/1:5,6:13:12.04:509,12,0	0/0:35,0:35:87.26:0,87,2123	0/0:27,0:27:69.18:0,69,1720	0/0:12,0:12:27.09:0,27,495	0/0:15,0:15:45.14:0,45,807	0/0:36,0:36:93.30:0,93,1679	1/1:1,3:4:9.03:380,9,0	0/0:7,0:7:18.06:0,18,472	0/0:30,0:30:75.17:0,75,1846	0/0:8,0:8:24.08:0,24,638	0/1:7,12:20:34.57:1457,0,35	0/0:22,0:21:66.23:0,66,1210	1/1:0,5:6:15.05:636,15,0
chr10	103797140	.	GC	G	4048.80	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.370;DP=491;FS=5.893;HRun=2;HaplotypeScore=65.4598;InbreedingCoeff=0.9799;MQ=79.45;MQ0=0;MQRankSum=-1.672;QD=37.14;ReadPosRankSum=0.767;VQSLOD=4.2431;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.26:0,78,1169	0/0:3,0:3:9.03:0,9,135	0/0:18,0:18:42.12:0,42,560	0/0:9,0:9:21.06:0,21,293	0/0:21,0:21:39.45:0,39,511	0/0:11,0:11:33.11:0,33,494	0/0:28,0:28:81.27:0,81,1214	1/1:1,20:21:60.19:779,60,0	0/0:14,0:14:42.14:0,42,629	0/0:24,0:24:72.24:0,72,1077	0/0:9,0:9:21.06:0,21,295	0/0:12,0:12:36.12:0,36,538	0/0:18,0:18:48.15:0,48,698	0/0:12,0:12:36.12:0,36,539	0/0:14,0:14:38.78:0,39,359	0/0:12,0:12:17.91:0,18,155	0/0:31,0:31:93.32:0,93,1393	0/0:27,0:27:81.25:0,81,1185	1/1:0,10:10:30.10:390,30,0	1/1:0,15:15:45.15:584,45,0	1/1:0,40:40:99:1402,108,0	0/0:11,0:11:24:0,24,311	0/0:9,0:9:27.09:0,27,402	0/0:29,0:29:78.25:0,78,1148	0/0:11,0:11:33.10:0,33,476	0/0:24,0:24:68.86:0,69,764	1/1:0,23:23:69.22:894,69,0	0/0:7,0:7:17.88:0,18,131
chr10	103799648	.	G	GTTT	5080.49	PASS	AB=0.539;AC=20;AF=0.357;AN=56;BaseQRankSum=6.239;DP=597;FS=3.218;HRun=9;HaplotypeScore=98.5334;InbreedingCoeff=0.8463;MQ=78.66;MQ0=0;MQRankSum=-2.754;QD=19.77;ReadPosRankSum=-0.309;VQSLOD=2.7512;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1298	0/0:10,0:10:27.08:0,27,341	0/0:21,0:21:38.93:0,39,447	0/0:18,0:17:43.81:0,44,499	0/1:3,0:23:7.76:59,0,8	0/0:15,0:15:39.12:0,39,493	0/0:21,0:21:51.05:0,51,644	1/1:11,17:32:66.19:1175,66,0	0/0:16,0:17:43.72:0,44,566	0/0:23,0:23:60.17:0,60,756	0/0:21,0:21:51.10:0,51,641	0/0:22,0:22:54.15:0,54,682	0/0:29,0:29:78.20:0,78,970	0/0:18,0:18:51.16:0,51,644	1/1:4,0:33:11.59:46,12,0	0/1:3,0:19:15.59:16,0,19	0/0:32,0:33:90.16:0,90,1102	0/0:15,0:15:42.13:0,42,531	1/1:8,9:18:36.11:672,36,0	1/1:3,16:20:57.17:991,57,0	1/1:1,15:19:45.11:757,45,0	1/1:2,0:14:13.71:30,14,0	0/0:10,0:10:30.10:0,30,379	0/0:17,0:17:48.09:0,48,588	0/0:14,0:14:36.10:0,36,455	1/1:1,0:31:42.13:141,42,0	1/1:7,24:34:63.17:1150,63,0	1/1:4,0:13:12.96:44,13,0
chr10	103801152	.	GAC	G	6862.98	PASS	AB=0.963;AC=23;AF=0.411;AN=56;BaseQRankSum=13.166;DP=705;FS=12.225;HRun=0;HaplotypeScore=89.5142;InbreedingCoeff=0.9018;MQ=72.88;MQ0=5;MQRankSum=0.282;QD=23.91;ReadPosRankSum=-0.626;VQSLOD=4.6421;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,2:41:24.97:0,25,1365	0/0:12,0:12:30.08:0,30,462	0/0:32,0:24:44.95:0,45,541	0/1:25,1:25:13.09:13,0,536	1/1:2,15:16:33.10:406,33,0	0/0:30,0:30:63.19:0,63,998	0/0:27,0:27:66.03:0,66,1011	1/1:6,23:29:60.16:726,60,0	0/0:28,1:29:38.33:0,38,1096	0/0:23,0:23:54.18:0,54,849	0/0:13,1:14:2.22:0,2,550	0/0:25,0:25:69.22:0,69,1100	0/0:27,0:27:75.26:0,75,1212	0/0:33,0:33:90.31:0,90,1453	1/1:1,21:22:51.16:628,51,0	1/1:1,19:20:54.17:665,54,0	0/0:33,1:34:47.38:0,47,1284	0/0:19,0:19:45.15:0,45,734	1/1:7,14:22:44.95:517,45,0	1/1:7,16:23:42.13:517,42,0	1/1:4,32:36:81.25:997,81,0	1/1:3,24:26:57.18:701,57,0	0/0:25,0:25:60.19:0,60,951	0/0:25,0:25:66.21:0,66,1041	0/0:22,0:22:57.15:0,57,901	1/1:5,23:28:69.15:807,69,0	1/1:5,18:23:48.15:591,48,0	1/1:5,9:12:24.07:295,24,0
chr10	103802497	.	G	GCCTCCTCTC	1652.02	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=6.885;DP=464;FS=0.000;HRun=0;HaplotypeScore=144.9119;InbreedingCoeff=0.7227;MQ=69.80;MQ0=0;MQRankSum=-6.717;QD=17.03;ReadPosRankSum=-1.370;VQSLOD=2.4968;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:60.15:0,60,1486	0/0:3,0:3:6.02:0,6,170	0/0:17,0:16:4.88:0,5,127	0/0:29,0:25:19.62:0,20,498	0/0:8,0:8:12.04:0,12,337	0/0:11,0:11:27.07:0,27,637	0/0:20,0:20:45.09:0,45,951	1/1:25,0:25:14.95:311,15,0	0/0:20,0:20:51.16:0,51,1375	0/0:13,0:13:33.10:0,33,792	0/0:5,0:5:12.03:0,12,248	0/0:12,0:12:27.07:0,27,590	0/0:9,0:9:21.04:0,21,521	0/0:16,0:16:39.08:0,39,856	0/0:26,0:26:69.14:0,69,1609	0/0:20,0:20:51.15:0,51,1307	0/0:29,0:29:66.10:0,66,1541	0/0:22,0:22:51.13:0,51,1267	1/1:9,0:9:3.01:68,3,0	1/1:6,0:6:9.03:234,9,0	1/1:24,1:24:3:25,3,0	0/0:10,0:10:21.07:0,21,557	0/0:8,0:8:18.03:0,18,346	0/0:21,0:21:42.02:0,42,952	0/0:14,0:14:30.07:0,30,673	0/0:26,0:26:63.21:0,63,1716	1/1:4,12:17:27.09:1148,27,0	0/1:15,0:15:22.48:22,0,530
chr10	103802555	.	T	TC	649.24	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.199;DP=522;FS=20.009;HRun=2;HaplotypeScore=60.4090;InbreedingCoeff=0.9189;MQ=50.46;MQ0=11;MQRankSum=-5.103;QD=22.39;ReadPosRankSum=-2.331;VQSLOD=1.8303;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.27:0,81,1129	0/0:3,0:3:6.02:0,6,84	0/0:67,0:18:41.74:0,42,632	0/0:71,0:19:33.76:0,34,377	0/0:15,0:15:42.14:0,42,587	0/0:15,0:15:45.15:0,45,629	0/0:26,0:26:72.20:0,72,984	1/1:2,4:6:15.04:201,15,0	0/0:22,0:22:63.18:0,63,858	0/0:10,0:10:30.09:0,30,404	0/0:7,0:7:21.06:0,21,277	0/0:11,0:11:33.10:0,33,439	0/0:17,0:17:51.17:0,51,702	0/0:13,0:13:36.12:0,36,496	0/0:23,0:23:69.17:0,69,921	0/0:18,0:18:51.17:0,51,712	0/0:25,0:25:72.23:0,72,988	0/0:18,0:18:54.16:0,54,734	1/1:2,4:4:9.03:130,9,0	1/1:0,6:6:15.05:209,15,0	1/1:1,6:7:7.83:154,8,0	0/0:8,0:8:24.08:0,24,335	0/0:8,0:8:24.08:0,24,335	0/0:27,0:27:30.22:0,30,996	0/0:17,0:17:48.15:0,48,654	0/0:29,0:29:84.28:0,84,1174	1/1:1,3:4:8.56:115,9,0	0/0:13,0:13:34.01:0,34,474
chr10	103802575	.	CCTT	C	815.17	PASS	AB=0.583;AC=9;AF=0.161;AN=56;BaseQRankSum=6.327;DP=488;FS=6.994;HRun=0;HaplotypeScore=77.3577;InbreedingCoeff=0.8223;MQ=54.21;MQ0=11;MQRankSum=-5.140;QD=28.11;ReadPosRankSum=-2.225;VQSLOD=2.8531;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.23:0,78,1590	0/0:2,0:2:6.02:0,6,132	0/0:55,0:18:44.25:0,44,718	0/0:83,0:27:31.09:0,31,665	0/0:19,0:19:57.05:0,57,1067	0/0:14,0:14:39.13:0,39,846	0/0:20,0:20:51.14:0,51,1048	1/1:0,9:9:27.06:406,27,0	0/0:15,0:15:36.12:0,36,776	0/0:8,0:8:18.06:0,18,380	0/0:5,0:5:15.05:0,15,331	0/0:12,0:12:24.07:0,24,475	0/0:16,0:16:42.14:0,42,901	0/0:12,0:12:27.09:0,27,580	0/0:22,0:22:57.18:0,57,1213	0/0:20,0:20:51.13:0,51,1044	0/0:18,0:18:54.16:0,54,1147	0/0:16,0:16:36.12:0,36,775	1/1:2,3:4:9.03:144,9,0	1/1:1,2:3:6.02:96,6,0	0/1:1,5:7:4.23:132,0,4	0/0:10,0:10:24.08:0,24,524	0/0:9,0:9:24.07:0,24,485	0/0:24,0:24:55.61:0,56,1132	0/0:13,0:13:39.13:0,39,804	0/0:22,0:22:60.18:0,60,1194	1/1:1,4:5:12.04:189,12,0	0/0:13,0:13:24.08:0,24,509
chr10	103802639	.	C	CCT	442.78	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-2.453;DP=455;FS=2.391;HRun=0;HaplotypeScore=69.7512;InbreedingCoeff=0.8573;MQ=71.01;MQ0=16;MQRankSum=0.155;QD=17.03;ReadPosRankSum=-0.860;VQSLOD=3.4374;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.14:0,42,619	0/0:4,0:4:9.03:0,9,136	0/0:56,0:19:14.57:0,15,302	0/0:80,0:30:49.22:0,49,465	0/0:19,0:19:54.11:0,54,764	0/0:19,0:19:51.16:0,51,738	0/0:19,0:19:57.10:0,57,748	1/1:4,1:4:5.97:75,6,0	0/0:15,0:15:41.80:0,42,570	0/0:10,0:10:27.09:0,27,408	0/0:9,0:9:27.05:0,27,329	0/0:12,0:12:30.49:0,30,354	0/0:9,0:9:27.02:0,27,289	0/0:13,0:12:33.04:0,33,381	0/0:26,0:26:78.10:0,78,1045	0/0:22,0:22:63.14:0,63,871	0/0:13,0:13:36:0,36,449	0/0:10,0:10:30.05:0,30,355	1/1:3,1:3:6.02:108,6,0	1/1:0,4:4:9.02:134,9,0	1/1:0,7:7:12.04:218,12,0	0/0:15,0:15:40.35:0,40,547	0/0:8,0:8:21.07:0,21,315	0/0:12,0:12:20.91:0,21,271	0/0:5,0:5:15.04:0,15,208	0/0:20,0:20:54.17:0,54,787	1/1:3,3:5:3:55,3,0	0/0:17,0:17:47.92:0,48,520
chr10	103802969	.	T	TG	4063.54	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.271;DP=665;FS=1.260;HRun=4;HaplotypeScore=76.4030;InbreedingCoeff=0.9847;MQ=87.32;MQ0=0;MQRankSum=-3.865;QD=33.31;ReadPosRankSum=-3.019;VQSLOD=2.9313;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,1559	0/0:7,0:7:21.07:0,21,260	0/0:20,0:20:57.18:0,57,703	0/0:30,0:30:81.18:0,81,954	0/0:21,0:21:57.18:0,57,705	0/0:17,0:17:51.16:0,51,632	0/0:41,0:41:99:0,120,1472	1/1:4,27:30:76.39:950,76,0	0/0:29,0:29:78.24:0,78,958	0/0:29,0:29:84.26:0,84,1032	0/0:22,0:22:54.16:0,54,656	0/0:22,0:22:66.21:0,66,818	0/0:25,0:25:75.24:0,75,929	0/0:27,0:27:78.24:0,78,967	0/0:19,0:19:57.18:0,57,706	0/0:25,0:25:69.22:0,69,855	0/0:38,0:38:99:0,114,1398	0/0:22,0:22:63.17:0,63,765	1/1:2,20:22:57.60:728,58,0	1/1:0,14:14:39.04:499,39,0	1/1:0,27:27:72.05:964,72,0	0/0:27,0:27:75.23:0,75,920	0/0:7,0:7:21.07:0,21,260	0/0:17,0:17:45.14:0,45,558	0/0:19,0:19:57.18:0,57,702	0/0:30,0:30:81.25:0,81,998	1/1:3,25:28:69.23:921,69,0	0/0:6,0:6:9.03:0,9,112
chr10	103804486	.	TA	T	4983.76	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=10.331;DP=505;FS=0.357;HRun=6;HaplotypeScore=49.5750;InbreedingCoeff=0.9818;MQ=75.61;MQ0=0;MQRankSum=-4.182;QD=27.23;ReadPosRankSum=0.565;VQSLOD=4.9956;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.75:0,91,1168	0/0:7,0:7:21.04:0,21,258	0/0:23,0:23:53.96:0,54,730	0/0:19,0:20:53.38:0,53,669	1/1:0,11:11:30.03:310,30,0	0/0:12,0:12:36.11:0,36,460	0/0:38,0:38:99:0,105,1381	1/1:2,21:23:63.13:661,63,0	0/0:16,0:16:45.15:0,45,592	0/0:8,0:8:24.08:0,24,315	0/0:5,0:5:15.05:0,15,197	0/0:15,0:15:42.14:0,42,553	0/0:20,0:20:54.15:0,54,679	0/0:26,0:26:78.25:0,78,1026	1/1:2,19:21:51.13:548,51,0	1/1:0,17:17:39.10:419,39,0	0/0:26,0:26:63.20:0,63,829	0/0:17,0:17:51.15:0,51,655	1/1:2,11:13:30.07:322,30,0	1/1:0,7:7:18.04:193,18,0	1/1:2,39:41:99:1161,108,0	1/1:0,13:13:33.08:355,33,0	0/0:11,0:11:30.10:0,30,394	0/0:38,0:38:99:0,105,1366	0/0:8,0:8:24.08:0,24,316	1/1:2,15:17:8.72:434,9,0	1/1:2,14:16:42.11:451,42,0	1/1:0,4:4:12.03:129,12,0
chr10	103806491	.	T	TG	3735.55	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.333;DP=585;FS=2.390;HRun=6;HaplotypeScore=57.5688;InbreedingCoeff=0.9879;MQ=92.53;MQ0=0;MQRankSum=-2.093;QD=31.13;ReadPosRankSum=1.385;VQSLOD=4.3078;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1071	0/0:5,0:5:9.02:0,9,92	0/0:30,0:29:60.10:0,60,603	0/0:21,0:21:44.19:0,44,459	1/1:3,19:22:54.17:679,54,0	0/0:29,0:29:81.15:0,81,813	0/0:24,0:24:63.13:0,63,636	0/0:29,0:29:78.17:0,78,795	0/0:13,0:13:39.09:0,39,398	0/0:17,0:17:45.10:0,45,458	0/0:10,0:10:30.07:0,30,306	0/0:14,0:14:36.08:0,36,367	0/0:14,0:14:30.06:0,30,306	0/0:19,0:19:54.12:0,54,551	1/1:1,23:24:60.19:755,60,0	1/1:0,24:24:56.58:717,57,0	0/0:27,0:27:69.11:0,69,694	0/0:27,0:27:72.16:0,72,734	0/0:14,0:14:33.07:0,33,337	0/0:17,0:17:51.11:0,51,518	0/0:34,0:34:90.20:0,90,918	1/1:1,17:18:39.12:491,39,0	0/0:24,0:24:64.02:0,64,640	0/0:25,0:25:72.16:0,72,734	0/0:19,0:18:48.09:0,48,482	1/1:1,15:16:45.14:566,45,0	0/0:16,0:16:39.05:0,39,385	1/1:1,15:16:42.13:528,42,0
chr10	103808447	.	GA	G	2562	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=9.852;DP=572;FS=4.284;HRun=9;HaplotypeScore=56.1607;InbreedingCoeff=0.8767;MQ=71.62;MQ0=0;MQRankSum=-0.812;QD=19.71;ReadPosRankSum=-0.792;VQSLOD=3.8075;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,1142	0/0:8,0:8:18.05:0,18,208	0/0:12,0:11:17.93:0,18,170	0/1:10,0:10:8.55:9,0,100	0/0:19,0:19:42.60:0,43,486	0/0:19,0:19:51.15:0,51,589	0/0:25,0:25:72.21:0,72,831	1/1:3,20:23:59.99:540,60,0	0/0:12,1:13:8.64:0,9,353	0/0:17,0:17:48.14:0,48,554	0/0:14,0:14:39.12:0,39,450	0/0:22,0:22:63.17:0,63,709	0/0:14,0:14:36.09:0,36,406	0/0:25,0:25:69.18:0,69,776	0/0:13,0:13:30.09:0,30,346	0/0:10,0:10:27.08:0,27,311	0/0:44,0:44:99:0,129,1473	0/0:44,0:44:99:0,123,1406	1/1:3,14:17:42:378,42,0	1/1:1,12:13:30.01:275,30,0	1/1:4,49:53:99:1181,129,0	0/0:16,0:16:14.99:0,15,423	0/0:11,0:11:27.08:0,27,308	0/0:31,0:31:90.27:0,90,1038	0/0:20,0:20:47.80:0,48,540	0/0:22,0:22:57.16:0,57,649	1/1:0,14:14:39.02:357,39,0	0/0:6,0:6:15.04:0,15,173
chr10	103809031	.	GT	G	1029.41	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.838;DP=467;FS=7.393;HRun=8;HaplotypeScore=70.0833;InbreedingCoeff=0.8525;MQ=81.25;MQ0=4;MQRankSum=-1.022;QD=9.53;ReadPosRankSum=4.442;VQSLOD=1.2958;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:79.82:0,80,860	0/0:6,0:6:15:0,15,130	0/0:35,1:22:12.90:0,13,106	0/0:14,0:10:8.94:0,9,88	1/1:21,3:24:38.42:247,38,0	0/0:14,0:14:29.54:0,30,290	0/0:17,0:17:47.94:0,48,471	0/0:22,0:22:27.64:0,28,218	0/0:9,0:9:8.54:0,9,58	0/0:12,0:12:30.01:0,30,290	0/0:11,0:11:27.03:0,27,264	0/0:17,0:17:37.24:0,37,330	0/0:13,0:13:21.02:0,21,206	0/0:9,0:9:9.12:0,9,175	1/1:12,0:12:20.76:137,21,0	1/1:23,0:23:41.51:272,42,0	0/0:20,0:20:47.99:0,48,481	0/0:16,0:16:42.02:0,42,416	0/0:10,0:10:23.78:0,24,187	0/0:12,0:12:16.06:0,16,116	0/0:24,0:24:14.62:0,15,156	1/1:20,1:21:38.46:249,38,0	0/0:8,0:8:21.03:0,21,215	0/0:20,0:20:46.13:0,46,501	0/0:14,0:15:32.91:0,33,325	1/1:16,1:17:0.58:202,1,0	0/0:17,0:17:1.59:0,2,70	1/1:11,0:11:14.80:97,15,0
chr10	103809038	.	TTG	T	2606.01	PASS	AB=0.843;AC=13;AF=0.232;AN=56;BaseQRankSum=4.634;DP=489;FS=2.691;HRun=0;HaplotypeScore=69.1057;InbreedingCoeff=0.6327;MQ=76.38;MQ0=4;MQRankSum=0.406;QD=19.30;ReadPosRankSum=5.011;VQSLOD=3.5760;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,125,1375	0/0:9,0:8:19.72:0,20,187	0/0:33,0:19:0.91:0,1,132	0/0:17,0:11:5.03:0,5,87	1/1:3,18:22:44.76:508,45,0	0/0:14,0:14:38.45:0,38,466	0/0:19,0:19:56.94:0,57,723	0/0:18,0:18:27.02:0,27,294	0/0:12,0:12:19.72:0,20,109	0/0:13,0:13:31.59:0,32,357	0/0:10,0:10:27.03:0,27,327	0/0:16,0:16:47.76:0,48,492	0/0:10,0:10:29.93:0,30,365	0/0:11,0:11:29.63:0,30,324	1/1:0,11:11:21.04:309,21,0	1/1:0,21:21:42.14:617,42,0	0/0:22,0:22:63.41:0,63,769	0/0:16,0:16:45.09:0,45,644	0/1:15,0:15:69.35:69,0,160	0/1:12,0:12:4.88:5,0,124	0/0:23,1:24:19.89:0,20,255	1/1:2,23:25:44.65:603,45,0	0/0:8,0:8:2.86:0,3,257	0/0:24,0:24:59.70:0,60,829	0/0:17,0:17:50.45:0,50,565	0/1:2,16:18:14.21:453,0,14	0/0:18,0:18:39.13:0,39,206	1/1:0,11:11:15.05:220,15,0
chr10	103809039	.	TG	T	1934.03	PASS	AB=0.982;AC=29;AF=0.518;AN=56;BaseQRankSum=8.245;DP=492;FS=7.862;HRun=11;HaplotypeScore=65.0885;InbreedingCoeff=0.6238;MQ=75.47;MQ0=4;MQRankSum=-0.123;QD=6.60;ReadPosRankSum=3.969;VQSLOD=1.3540;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,3:43:17:0,17,483	0/0:9,0:8:7.25:0,7,59	0/1:33,0:19:14.76:15,0,74	0/1:16,0:10:0.94:1,0,16	1/1:22,0:22:33.83:175,34,0	0/0:14,0:14:23.87:0,24,216	0/0:18,0:19:33:0,33,313	1/1:9,9:18:0.49:165,0,0	1/1:2,10:12:14.98:123,15,0	0/0:12,0:12:7.59:0,8,87	0/0:9,0:9:9.02:0,9,95	0/1:19,0:19:3.57:4,0,147	0/0:10,0:10:9.02:0,9,128	0/1:9,1:10:3.49:3,0,137	1/1:11,0:11:20.12:106,20,0	1/1:21,0:21:40.25:212,40,0	0/0:22,0:22:38.98:0,39,365	0/0:17,0:17:27.05:0,27,279	1/1:12,3:15:23.89:184,24,0	1/1:5,6:12:17.77:136,18,0	1/1:8,16:24:35.93:291,36,0	1/1:25,0:25:43.01:228,43,0	0/1:8,0:8:9.16:9,0,83	0/0:24,3:27:24.72:0,25,412	0/0:17,0:17:33.28:0,33,263	1/1:18,0:18:2.79:138,3,0	1/1:4,14:18:32.96:270,33,0	1/1:11,0:11:14.38:76,14,0
chr10	103811308	.	A	AGC	158.52	PASS	AB=0.838;AC=7;AF=0.130;AN=54;BaseQRankSum=5.348;DP=136;FS=6.371;HRun=0;HaplotypeScore=29.5332;InbreedingCoeff=-0.2249;MQ=68.10;MQ0=0;MQRankSum=-3.119;QD=3.45;ReadPosRankSum=-0.205;VQSLOD=0.0445;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,1:11:4.02:0,4,432	./.	0/0:6,0:5:4.54:0,5,60	0/0:2,0:2:2.86:0,3,18	0/0:3,0:3:3.01:0,3,47	0/0:3,0:3:9.03:0,9,135	0/1:9,1:10:16.05:16,0,206	0/1:6,1:7:48.13:48,0,221	0/0:5,0:5:15.05:0,15,223	0/0:5,0:5:15.05:0,15,221	0/0:2,0:2:6.02:0,6,95	0/0:4,0:4:12.04:0,12,166	0/1:2,1:3:20.10:20,0,86	0/0:3,0:3:6.02:0,6,97	0/0:3,0:3:6.02:0,6,93	0/1:5,1:6:24.79:25,0,154	0/0:5,0:5:15.05:0,15,216	0/1:5,2:7:90.18:90,0,196	0/0:4,0:4:9.03:0,9,145	0/0:3,0:3:6.02:0,6,83	0/1:8,1:9:40.13:40,0,167	0/0:4,0:4:9.49:0,9,122	0/0:3,0:3:6.02:0,6,75	0/0:8,0:8:9.03:0,9,121	0/0:6,0:6:18.04:0,18,245	0/1:3,1:4:43.15:43,0,132	0/0:8,0:8:24.08:0,24,344	0/0:2,0:2:6.02:0,6,97
chr10	103812465	.	C	CA	1803.77	PASS	AB=0.735;AC=11;AF=0.196;AN=56;BaseQRankSum=-2.440;DP=609;FS=0.960;HRun=10;HaplotypeScore=73.5920;InbreedingCoeff=0.6891;MQ=75.97;MQ0=0;MQRankSum=-1.550;QD=14.66;ReadPosRankSum=-2.177;VQSLOD=3.4958;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,1:48:85.89:0,86,885	0/0:10,0:10:29.97:0,30,246	0/0:14,0:14:22.01:0,22,147	0/1:21,0:21:36.58:37,0,95	1/1:5,13:18:16.23:363,16,0	0/0:14,0:14:35.96:0,36,296	0/0:29,0:29:68.86:0,69,560	0/0:16,0:16:41.93:0,42,341	0/0:22,0:22:47.81:0,48,386	0/0:24,0:25:61.72:0,62,492	0/0:25,0:25:53.88:0,54,436	0/0:19,0:20:49.97:0,50,400	0/0:16,0:17:25.26:0,25,202	0/0:14,0:14:26.95:0,27,222	0/1:7,9:18:10.56:264,0,11	1/1:1,13:14:27.07:288,27,0	0/0:34,1:35:63.90:0,64,732	0/0:34,0:36:82.39:0,82,666	0/0:19,0:19:35.93:0,36,295	0/0:21,1:22:21.58:0,22,373	0/0:28,0:28:68.10:0,68,546	1/1:3,12:15:8.21:283,8,0	0/0:21,0:21:44:0,44,367	0/0:20,0:22:57.99:0,58,452	0/0:15,0:17:49:0,49,378	1/1:10,19:30:24.97:567,25,0	0/0:32,0:32:77.83:0,78,635	0/1:2,5:7:3.59:171,0,4
chr10	103812766	.	A	AC	5069.89	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-12.410;DP=690;FS=3.257;HRun=1;HaplotypeScore=64.6267;InbreedingCoeff=0.9995;MQ=71.81;MQ0=0;MQRankSum=0.486;QD=40.24;ReadPosRankSum=-1.780;VQSLOD=4.8045;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1539	0/0:11,0:11:33.11:0,33,428	0/0:21,0:21:57:0,57,720	0/0:15,0:15:27.50:0,27,520	0/0:19,0:19:57.18:0,57,734	0/0:20,0:20:57.15:0,57,698	0/0:26,0:26:78.22:0,78,971	1/1:1,26:27:75.20:1097,75,0	0/0:25,0:25:69.22:0,69,896	0/0:28,0:28:81.26:0,81,1051	0/0:18,0:18:51.17:0,51,660	0/0:26,0:26:78.24:0,78,997	0/0:25,0:25:72.23:0,72,934	0/0:28,0:28:84.27:0,84,1089	0/0:28,0:28:78.25:0,78,1010	0/0:21,0:21:63.20:0,63,818	0/0:47,0:47:99:0,135,1735	0/0:38,0:38:99:0,114,1448	1/1:1,21:22:57.16:830,57,0	1/1:1,13:14:33.11:493,33,0	1/1:0,42:42:99:1753,117,0	0/0:23,0:23:66.21:0,66,857	0/0:23,0:23:69.01:0,69,869	0/0:29,0:29:84.26:0,84,1075	0/0:16,0:16:48.16:0,48,622	0/0:26,0:26:75.23:0,75,959	1/1:0,21:21:60.20:897,60,0	0/0:10,0:10:30.10:0,30,390
chr10	103818429	.	AT	A	2198.93	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.935;DP=706;FS=9.562;HRun=1;HaplotypeScore=93.2919;InbreedingCoeff=0.9365;MQ=70.68;MQ0=0;MQRankSum=-10.249;QD=31.87;ReadPosRankSum=-0.778;VQSLOD=2.1380;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,2049	0/0:12,0:12:36.10:0,36,529	0/0:21,1:22:0.38:0,0,831	0/0:18,0:18:54.17:0,54,811	0/0:17,0:17:51.17:0,51,810	0/0:22,0:22:63.18:0,63,954	0/0:36,0:36:99:0,108,1702	1/1:0,16:16:48.13:626,48,0	0/0:30,0:30:90.29:0,90,1391	0/0:23,0:23:69.20:0,69,1019	0/0:16,0:16:48.15:0,48,725	0/0:32,0:32:96.33:0,96,1532	0/0:25,0:25:75.26:0,75,1197	0/0:45,0:45:99:0,135,2133	0/0:39,0:39:99:0,117,1846	0/0:30,0:30:90.29:0,90,1416	0/0:43,0:43:99:0,129,2061	0/0:23,0:23:66.22:0,66,1051	1/1:2,10:12:36.11:473,36,0	1/1:0,12:12:30.04:372,30,0	1/1:0,8:8:12.04:158,12,0	0/0:23,0:23:69.24:0,69,1103	0/0:27,0:27:78.24:0,78,1192	0/0:41,0:41:99:0,123,1894	0/0:25,0:25:75.24:0,75,1176	0/0:31,0:31:93.31:0,93,1463	1/1:1,20:21:57.10:743,57,0	0/0:13,0:13:39.06:0,39,593
chr10	103818436	.	G	GTC	3868.20	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.691;DP=719;FS=21.876;HRun=0;HaplotypeScore=115.3216;InbreedingCoeff=0.9994;MQ=69.02;MQ0=0;MQRankSum=-13.038;QD=44.98;ReadPosRankSum=-1.632;VQSLOD=2.3872;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,2293	0/0:13,0:13:39.12:0,39,602	0/0:19,0:19:35.99:0,36,714	0/0:18,0:18:51.13:0,51,736	0/0:16,0:16:48.16:0,48,783	0/0:22,0:22:63.22:0,63,1027	0/0:38,0:38:99:0,114,1831	1/1:5,13:18:51.16:942,51,0	0/0:27,0:27:81.28:0,81,1321	0/0:21,0:21:63:0,63,973	0/0:16,0:16:42.14:0,42,685	0/0:32,0:32:90.29:0,90,1432	0/0:24,0:24:72.25:0,72,1170	0/0:47,0:47:99:0,138,2220	0/0:41,0:41:99:0,123,1956	0/0:30,0:30:90.31:0,90,1465	0/0:44,0:44:99:0,132,2116	0/0:21,0:21:63.22:0,63,1028	1/1:7,10:17:45.13:808,45,0	1/1:6,10:16:34.63:586,35,0	1/1:7,5:12:23.62:356,24,0	0/0:23,0:23:65.44:0,65,1033	0/0:22,0:22:60.20:0,60,974	0/0:43,0:43:99:0,129,2054	0/0:22,0:22:66.23:0,66,1070	0/0:32,0:32:95.90:0,96,1504	1/1:5,17:23:53.93:1176,54,0	0/0:13,0:13:39.11:0,39,606
chr10	103818781	.	AGTT	A	151.91	PASS	AB=0.816;AC=6;AF=0.107;AN=56;BaseQRankSum=5.611;DP=462;FS=46.175;HRun=0;HaplotypeScore=81.6571;InbreedingCoeff=-0.1279;MQ=69.22;MQ0=9;MQRankSum=-6.276;QD=2.05;ReadPosRankSum=-0.867;VQSLOD=-0.6856;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.22:0,69,1426	0/1:2,3:5:73.81:74,0,115	0/0:25,0:15:41.02:0,41,536	0/0:23,0:10:18.49:0,18,307	0/0:12,2:14:9.37:0,9,674	0/0:19,0:19:4.77:0,5,966	0/0:18,2:20:7.33:0,7,1035	0/1:26,2:28:23.73:24,0,1290	0/0:16,1:17:37.65:0,38,935	0/0:11,0:11:29.63:0,30,600	0/0:13,2:15:15.07:0,15,642	0/0:16,0:16:45.14:0,45,902	0/0:15,0:15:38.92:0,39,709	0/0:25,0:25:66.14:0,66,1304	0/1:9,3:12:99:114,0,457	0/0:11,1:12:11.52:0,12,624	0/0:26,0:26:78.26:0,78,1589	0/0:15,0:15:45.15:0,45,932	0/0:15,0:15:45.15:0,45,944	0/0:17,1:18:48.09:0,48,895	0/1:13,1:14:18.29:18,0,646	0/1:10,2:12:4.30:4,0,499	0/0:9,0:9:24.07:0,24,461	0/0:23,0:23:69.24:0,69,1425	0/0:8,3:11:19.16:0,19,490	0/0:9,1:10:27.07:0,27,507	0/0:24,0:24:69.24:0,69,1455	0/1:2,1:3:37.18:37,0,124
chr10	103818793	.	AG	A	1171.58	PASS	AB=0.981;AC=23;AF=0.411;AN=56;BaseQRankSum=1.766;DP=485;FS=35.363;HRun=11;HaplotypeScore=78.7929;InbreedingCoeff=0.7862;MQ=72.64;MQ0=9;MQRankSum=0.333;QD=4.74;ReadPosRankSum=3.781;VQSLOD=-0.2732;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:26:19.52:0,20,340	0/0:5,0:6:11.66:0,12,70	0/0:33,0:22:24.23:0,24,206	0/1:27,0:12:0.12:12,0,0	0/0:15,0:17:5.63:0,6,41	0/0:19,0:19:35.95:0,36,345	0/0:17,0:17:33.05:0,33,335	1/1:11,1:22:16.77:62,17,0	0/0:14,0:14:29.88:0,30,273	0/0:11,0:11:12.48:0,12,118	0/1:16,1:17:0.35:0,0,173	1/1:4,14:19:15.04:188,15,0	1/1:4,14:18:15.97:186,16,0	1/1:6,16:22:38.94:319,39,0	0/0:4,0:13:21.76:0,22,115	0/0:11,0:14:20.58:0,21,145	0/0:25,0:25:54.08:0,54,542	0/0:15,0:15:24.05:0,24,246	1/1:3,0:15:25.09:83,25,0	1/1:8,1:18:17:58,17,0	1/1:5,0:14:11.12:40,11,0	0/0:10,0:15:8.64:0,9,46	1/1:6,8:15:3.48:28,3,0	1/1:5,13:19:38:301,38,0	0/1:17,0:17:3.27:3,0,103	0/0:8,0:10:8.70:0,9,51	1/1:5,0:24:32.58:95,33,0	0/0:2,0:3:8.85:0,9,66
chr10	103820827	.	TTCC	T	591.58	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=7.398;DP=596;FS=3.165;HRun=0;HaplotypeScore=82.2432;InbreedingCoeff=0.9130;MQ=55.36;MQ0=15;MQRankSum=-4.784;QD=17.40;ReadPosRankSum=-2.701;VQSLOD=2.9782;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,2688	0/0:11,0:11:30.09:0,30,643	0/0:50,0:12:21.01:0,21,495	0/0:84,0:24:34.31:0,34,711	1/1:1,9:10:3.01:36,3,0	0/0:22,0:22:57.12:0,57,1154	0/0:26,0:26:78.26:0,78,1638	0/0:21,0:20:59:0,59,1217	0/0:21,0:19:54.19:0,54,1222	0/0:25,0:24:69.15:0,69,1487	0/0:13,0:12:30.10:0,30,692	0/0:25,0:25:69.24:0,69,1566	0/0:17,0:16:45.14:0,45,927	0/0:14,0:14:42.12:0,42,920	1/1:0,5:5:15.05:221,15,0	1/1:3,3:6:11.63:159,12,0	0/0:22,0:22:63.21:0,63,1395	0/0:21,0:21:56.62:0,57,1207	0/0:18,0:18:54.18:0,54,1163	0/0:20,0:19:54.15:0,54,1085	0/0:33,0:32:84.24:0,84,1768	1/1:1,4:5:6.02:95,6,0	0/0:13,0:13:38.80:0,39,822	0/0:37,0:34:99:0,105,2336	0/0:9,0:8:24.08:0,24,535	1/1:3,5:7:15.05:235,15,0	0/0:12,0:12:36.12:0,36,830	./.
chr10	103820859	.	C	CT	294.56	PASS	AB=0.975;AC=11;AF=0.204;AN=54;BaseQRankSum=7.268;DP=577;FS=4.455;HRun=2;HaplotypeScore=75.0412;InbreedingCoeff=0.8073;MQ=63.73;MQ0=7;MQRankSum=-6.107;QD=3.04;ReadPosRankSum=-1.369;VQSLOD=-0.4357;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,1:43:82.58:0,83,1712	0/0:8,0:8:21.07:0,21,291	0/0:45,0:26:70.29:0,70,857	0/1:75,0:27:2.86:3,0,495	./.	0/0:19,0:19:57.16:0,57,777	0/0:29,0:29:87.29:0,87,1216	0/0:21,0:21:48.15:0,48,656	0/0:19,0:19:57.19:0,57,797	0/0:17,0:17:48.14:0,48,641	0/0:10,0:10:30.10:0,30,419	0/0:33,0:33:99:0,99,1354	0/0:17,0:17:51.17:0,51,709	0/0:31,0:31:84.27:0,84,1155	1/1:0,3:3:2.96:19,3,0	1/1:0,7:7:20.92:191,21,0	0/0:21,0:20:52.04:0,52,695	0/0:21,1:21:60.20:0,60,834	0/0:14,0:14:42.12:0,42,566	0/0:15,0:15:45.15:0,45,629	0/0:33,0:33:99:0,99,1383	1/1:0,2:2:3:29,3,0	0/0:18,0:18:50.87:0,51,696	0/0:33,0:31:96.32:0,96,1340	0/0:11,0:11:30.10:0,30,420	1/1:1,4:5:10.16:104,10,0	0/0:21,0:21:63.21:0,63,880	1/1:0,3:3:9.02:99,9,0
chr10	103820865	.	CCTTT	C	553.57	PASS	AB=0.985;AC=11;AF=0.204;AN=54;BaseQRankSum=7.682;DP=574;FS=1.875;HRun=0;HaplotypeScore=106.2067;InbreedingCoeff=0.8370;MQ=65.88;MQ0=7;MQRankSum=-5.175;QD=6.44;ReadPosRankSum=0.523;VQSLOD=2.5577;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,3681	0/0:8,0:8:24.07:0,24,592	0/0:44,0:25:59.94:0,60,1489	0/1:64,0:24:4.76:5,0,1021	./.	0/0:19,0:19:57.20:0,57,1586	0/0:31,0:31:93.32:0,93,2643	0/0:25,0:25:63.19:0,63,1646	0/0:21,0:21:63.19:0,63,1628	0/0:18,0:18:48.16:0,48,1326	0/0:11,0:11:33.11:0,33,897	0/0:34,0:34:99:0,102,2797	0/0:16,0:16:48.16:0,48,1390	0/0:33,0:33:96.33:0,96,2681	1/1:0,3:3:5.81:46,6,0	1/1:0,7:7:21.07:299,21,0	0/0:19,0:18:54.17:0,54,1499	0/0:20,1:20:60.21:0,60,1734	0/0:10,0:10:30.10:0,30,842	0/0:14,0:14:42.14:0,42,1171	0/0:34,0:34:99:0,102,2826	1/1:0,2:2:5.93:60,6,0	0/0:18,0:18:48.16:0,48,1376	0/0:33,0:32:96.32:0,96,2620	0/0:11,0:11:30.10:0,30,870	1/1:0,4:4:12.01:157,12,0	0/0:25,0:25:75.24:0,75,1968	1/1:0,3:3:9.03:143,9,0
chr10	103820875	.	TCCC	T	880.59	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=9.608;DP=591;FS=9.213;HRun=6;HaplotypeScore=103.8671;InbreedingCoeff=0.8692;MQ=64.96;MQ0=7;MQRankSum=-7.530;QD=20.01;ReadPosRankSum=-1.973;VQSLOD=-0.1648;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,2490	0/0:8,0:8:24.08:0,24,509	0/0:41,0:27:59.63:0,60,1074	0/0:63,0:23:17.82:0,18,743	0/1:5,0:5:12.49:12,0,13	0/0:18,0:18:51.18:0,51,1134	0/0:30,0:30:90.30:0,90,1933	0/0:19,0:19:54.14:0,54,1016	0/0:19,0:19:57.20:0,57,1230	0/0:14,0:14:39.12:0,39,842	0/0:8,0:8:24.08:0,24,530	0/0:34,0:34:96.27:0,96,2013	0/0:15,0:15:45.13:0,45,949	0/0:37,0:37:99:0,102,2259	1/1:6,3:9:20.72:153,21,0	1/1:1,10:11:30.53:408,31,0	0/0:19,0:19:53.13:0,53,1104	0/0:24,0:23:63.61:0,64,1260	0/0:10,0:10:30.08:0,30,594	0/0:18,0:18:51.17:0,51,1103	0/0:32,0:32:93.32:0,93,2038	1/1:2,3:5:11.93:128,12,0	0/0:19,0:19:50.89:0,51,1025	0/0:31,0:30:87.26:0,87,1895	0/0:15,0:15:45.13:0,45,903	1/1:6,4:10:20.41:215,20,0	0/0:23,0:23:65.77:0,66,1435	1/1:1,3:4:8.28:135,8,0
chr10	103824094	.	G	GAGA	344.01	PASS	AB=1.000;AC=26;AF=0.500;AN=52;BaseQRankSum=2.818;DP=166;FS=10.234;HRun=0;HaplotypeScore=216.1169;InbreedingCoeff=0.3478;MQ=82.17;MQ0=0;MQRankSum=-1.107;QD=3.44;ReadPosRankSum=0.431;VQSLOD=1.5663;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:3.75:10,4,0	0/0:4,0:4:2.90:0,3,10	0/1:2,0:2:6.06:6,0,29	0/1:13,0:12:37.12:109,0,37	0/0:4,0:4:2.98:0,3,9	0/0:3,0:3:0.92:0,1,7	0/0:6,0:6:2.30:0,2,4	./.	0/0:9,0:9:1.32:0,1,11	1/1:4,0:4:10.32:45,10,0	0/0:5,0:5:4.23:0,4,10	1/1:13,0:13:1.98:6,2,0	0/0:7,0:7:3.66:0,4,8	0/0:8,0:8:4.78:0,5,14	0/0:9,0:9:4.80:0,5,13	0/1:12,0:12:1.36:5,0,1	1/1:4,0:4:3.63:11,4,0	1/1:6,0:6:14.46:59,14,0	1/1:0,3:3:8.98:74,9,0	1/1:1,1:2:5.63:30,6,0	./.	0/0:4,0:4:0.16:0,0,1	0/0:7,0:7:1.77:0,2,4	0/1:7,0:7:0.07:0,0,11	1/1:7,0:7:2.11:6,2,0	1/1:8,0:8:16.01:58,16,0	1/1:3,2:5:3.10:42,3,0	1/1:3,0:3:6.31:21,6,0
chr10	103824095	.	G	GA	4783.64	PASS	AB=1.000;AC=50;AF=0.962;AN=52;BaseQRankSum=2.887;DP=170;FS=2.038;HRun=0;HaplotypeScore=194.3886;InbreedingCoeff=-0.0416;MQ=83.97;MQ0=0;MQRankSum=-3.246;QD=28.14;ReadPosRankSum=2.842;VQSLOD=4.5263;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:27.04:285,27,0	1/1:3,1:4:9.02:102,9,0	0/1:3,0:3:6.68:18,0,7	0/1:13,0:12:4.16:82,0,4	1/1:4,0:4:12.02:120,12,0	1/1:3,0:3:9.02:98,9,0	1/1:6,0:6:18.04:189,18,0	./.	1/1:9,0:9:27.06:284,27,0	1/1:4,0:4:12.04:152,12,0	1/1:5,0:5:15.01:143,15,0	1/1:13,0:13:39.10:417,39,0	1/1:8,0:8:21.05:217,21,0	1/1:8,0:8:23.95:242,24,0	1/1:9,0:9:27.06:277,27,0	1/1:12,0:12:36.07:373,36,0	1/1:4,0:4:12.02:125,12,0	1/1:6,0:6:18.06:234,18,0	1/1:3,0:3:9.03:134,9,0	1/1:2,0:2:6.02:79,6,0	./.	1/1:5,0:5:12.02:126,12,0	1/1:8,0:8:17.86:188,18,0	1/1:7,0:7:15.01:140,15,0	1/1:7,0:7:18.04:193,18,0	1/1:8,0:8:24.08:303,24,0	1/1:2,3:5:14.91:157,15,0	1/1:3,0:3:9.03:106,9,0
chr10	103824097	.	A	AG	1076.97	PASS	AB=0.833;AC=51;AF=0.981;AN=52;BaseQRankSum=3.859;DP=181;FS=4.276;HRun=3;HaplotypeScore=203.7342;InbreedingCoeff=0.0271;MQ=86.42;MQ0=0;MQRankSum=-3.906;QD=5.98;ReadPosRankSum=3.560;VQSLOD=0.6149;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:12:17.28:54,17,0	1/1:2,2:4:6.65:18,7,0	1/1:2,1:3:3.99:44,4,0	0/1:12,2:14:15:41,0,15	1/1:0,4:4:9.03:30,9,0	1/1:2,3:5:6.07:18,6,0	1/1:0,6:6:12.19:37,12,0	./.	1/1:0,9:9:17.70:52,18,0	1/1:0,4:4:9.93:38,10,0	1/1:1,4:5:11.28:48,11,0	1/1:0,13:13:26.21:79,26,0	1/1:1,7:8:12.90:41,13,0	1/1:1,7:8:13.60:80,14,0	1/1:0,9:9:18.05:54,18,0	1/1:2,10:12:27.04:118,27,0	1/1:1,4:5:8.45:26,8,0	1/1:0,6:6:15.02:56,15,0	1/1:1,3:4:6.41:21,6,0	1/1:2,1:3:1.31:5,1,0	./.	1/1:2,3:5:9.29:44,9,0	1/1:2,6:8:12.94:41,13,0	1/1:1,7:8:5.17:22,5,0	1/1:1,6:8:14.17:43,14,0	1/1:1,7:8:18.85:98,19,0	1/1:3,2:5:7.67:33,8,0	1/1:0,3:3:6.66:22,7,0
chr10	103825142	.	TCACACACACA	T	1595.75	PASS	AB=0.942;AC=11;AF=0.220;AN=50;BaseQRankSum=2.008;DP=535;FS=11.781;HRun=0;HaplotypeScore=158.1549;InbreedingCoeff=0.5018;MQ=44.16;MQ0=29;MQRankSum=0.955;QD=11.56;ReadPosRankSum=-3.007;VQSLOD=1.4730;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:37:21.04:0,21,510	0/0:8,0:8:15.05:0,15,486	./.	./.	0/1:15,0:16:0.96:55,0,1	0/0:23,0:21:18.84:0,19,762	0/0:31,0:30:16.47:0,16,544	0/0:13,0:11:1.25:0,1,3	0/0:26,0:25:14.16:0,14,444	0/0:14,0:11:15:0,15,388	0/0:9,0:9:9.03:0,9,206	0/0:35,0:33:30.10:0,30,919	0/0:14,0:13:17.92:0,18,353	0/0:25,0:24:29.76:0,30,934	1/1:23,1:25:14.28:257,14,0	1/1:17,0:21:14.97:294,15,0	0/0:34,0:33:33.10:0,33,798	0/0:25,0:23:21.07:0,21,560	0/1:7,2:9:0.77:94,0,1	0/0:12,2:13:2.96:0,3,20	0/1:21,0:19:68.74:251,0,69	0/1:17,0:17:1.24:306,0,1	0/0:13,0:13:15.05:0,15,381	0/0:47,0:42:41.48:0,41,1425	0/0:17,0:15:18.06:0,18,585	0/1:19,1:18:99:311,0,206	1/1:9,0:7:6.17:177,6,0	./.
chr10	103826460	.	T	TA	7030.60	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-15.928;DP=793;FS=11.140;HRun=1;HaplotypeScore=81.6189;InbreedingCoeff=0.9997;MQ=74.72;MQ0=0;MQRankSum=-0.951;QD=39.28;ReadPosRankSum=-1.928;VQSLOD=3.8006;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:64:99:0,193,2434	0/0:10,0:10:30.10:0,30,389	0/0:23,0:23:64.41:0,64,762	0/0:15,0:16:39.08:0,39,455	0/0:16,0:16:48.15:0,48,610	0/0:30,0:30:90.25:0,90,1134	0/0:27,0:27:81.20:0,81,1030	1/1:0,39:39:99:1655,117,0	0/0:23,0:23:66.21:0,66,843	0/0:40,0:40:99:0,114,1447	0/0:13,0:13:33.09:0,33,413	0/0:28,0:28:84.25:0,84,1064	0/0:28,0:28:84.27:0,84,1089	0/0:24,0:24:69.22:0,69,895	0/0:33,0:33:99:0,99,1255	0/0:27,0:27:78.21:0,78,961	0/0:44,0:44:99:0,132,1667	0/0:24,0:24:69.22:0,69,894	1/1:1,23:24:72.22:1031,72,0	1/1:1,28:29:81.18:1149,81,0	1/1:4,55:59:99:2086,141,0	0/0:25,0:25:72.20:0,72,905	0/0:22,0:22:66.20:0,66,840	0/0:27,0:27:78.23:0,78,995	0/0:18,0:18:54.16:0,54,685	0/0:41,0:41:99:0,123,1549	1/1:0,28:28:75.25:1110,75,0	0/0:11,0:11:30.10:0,30,388
chr10	103829507	.	CTG	C	864.03	PASS	AB=0.900;AC=18;AF=0.360;AN=50;BaseQRankSum=3.164;DP=580;FS=5.796;HRun=0;HaplotypeScore=66.8555;InbreedingCoeff=0.3479;MQ=60.43;MQ0=18;MQRankSum=1.271;QD=3.69;ReadPosRankSum=2.447;VQSLOD=1.3933;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:9.24:0,9,425	0/0:4,0:4:3.01:0,3,45	./.	./.	1/1:10,5:17:5.85:47,6,0	0/0:11,0:12:5.03:0,5,109	0/0:27,0:29:7.87:0,8,217	0/0:29,0:29:12.76:0,13,83	0/0:20,0:19:27.08:0,27,379	0/0:11,0:11:9.03:0,9,131	./.	1/1:12,7:21:20.72:191,21,0	0/1:14,0:15:2.13:2,0,96	0/1:18,1:19:17.57:18,0,164	1/1:16,2:22:20.69:174,21,0	1/1:13,5:19:14.87:144,15,0	0/1:26,3:29:81.92:82,0,233	0/0:9,0:10:0.89:0,1,140	0/0:22,0:22:14.98:0,15,190	0/0:12,0:11:12.01:0,12,137	0/0:47,0:46:15.04:0,15,197	1/1:11,5:15:12.03:130,12,0	0/0:11,0:11:12.01:0,12,134	0/1:26,6:32:99:103,0,561	0/1:12,0:12:20.32:20,0,119	1/1:16,4:20:7.31:94,7,0	0/0:17,0:17:18.52:0,19,237	0/1:8,3:11:13.97:27,0,14
chr10	103829967	.	AAC	A	520.50	PASS	AB=0.899;AC=25;AF=0.500;AN=50;BaseQRankSum=7.272;DP=527;FS=0.000;HRun=0;HaplotypeScore=78.6281;InbreedingCoeff=-0.1695;MQ=69.66;MQ0=5;MQRankSum=-1.553;QD=1.40;ReadPosRankSum=2.261;VQSLOD=0.6726;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,3:36:2.73:3,0,352	0/0:7,0:8:0.94:0,1,153	./.	./.	0/1:7,1:9:23.82:24,0,79	1/1:7,0:9:2.69:15,3,0	1/1:14,0:24:19.20:91,19,0	./.	0/1:22,1:23:9.42:9,0,246	0/1:20,3:23:9.09:9,0,280	0/1:11,0:12:34.97:35,0,59	0/1:14,7:20:51.08:113,0,51	0/1:14,4:19:82.29:82,0,192	0/0:17,0:17:2.98:0,3,23	0/1:28,2:29:23.52:24,0,491	0/1:7,1:8:17.78:18,0,164	0/0:21,0:31:30.51:0,31,364	0/1:21,2:22:34.20:34,0,296	1/1:15,0:18:2.81:14,3,0	1/1:4,0:7:2.84:14,3,0	1/1:30,0:33:2.84:14,3,0	0/0:15,0:16:23.95:0,24,313	0/1:8,0:8:4.75:5,0,139	0/1:35,2:37:11.74:12,0,605	0/1:15,0:16:16.55:56,0,17	0/0:16,0:16:18.06:0,18,269	1/1:7,0:15:19.89:98,20,0	0/0:3,0:3:3.01:0,3,45
chr10	103832397	.	T	TCACACACACACACACA	7456.97	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-2.266;DP=831;FS=3.417;HRun=0;HaplotypeScore=303.9720;InbreedingCoeff=0.8029;MQ=64.93;MQ0=16;MQRankSum=-9.512;QD=24.69;ReadPosRankSum=-5.722;VQSLOD=2.1354;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:46:82.57:0,83,3144	0/0:16,0:18:33.10:0,33,1134	0/0:45,0:28:20.43:0,20,500	0/0:43,0:30:2.94:0,3,378	1/1:7,0:25:3.48:147,3,0	0/0:22,0:25:51.16:0,51,1439	0/0:29,0:29:54.19:0,54,1965	1/1:33,0:32:54.12:1350,54,0	0/0:30,0:32:47.38:0,47,2076	0/0:25,0:24:42.14:0,42,1678	0/0:17,0:21:45.15:0,45,1586	0/0:23,0:24:42.14:0,42,1571	0/0:25,0:25:61.94:0,62,1947	0/0:26,0:30:77.99:0,78,2655	1/1:6,0:22:3.01:146,3,0	1/1:15,15:39:30.57:2002,31,0	0/0:49,0:50:46.16:0,46,3532	0/0:27,0:27:66.22:0,66,2461	1/1:22,0:31:48.04:974,48,0	1/1:5,0:21:6.02:338,6,0	1/1:47,0:41:23.81:490,24,0	1/1:18,0:17:11.75:344,12,0	0/0:19,0:20:45.15:0,45,1679	0/0:44,0:45:99:0,111,3844	0/0:20,0:20:54.15:0,54,1965	0/1:16,0:13:99:741,0,99	1/1:6,0:33:10.28:469,10,0	1/1:6,6:16:6.02:456,6,0
chr10	103833543	.	AG	A	1717.75	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=5.721;DP=314;FS=41.313;HRun=8;HaplotypeScore=49.8871;InbreedingCoeff=0.8166;MQ=70.92;MQ0=12;MQRankSum=-1.997;QD=11.23;ReadPosRankSum=3.143;VQSLOD=0.0053;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:30.07:0,30,347	0/0:1,0:1:3.01:0,3,36	0/0:24,1:10:2.40:0,2,114	0/0:34,0:10:7.95:0,8,109	1/1:3,12:14:33.04:318,33,0	0/0:3,0:3:1.56:0,2,34	0/0:8,0:8:15.01:0,15,155	1/1:13,0:12:19.34:105,19,0	0/0:11,0:11:21.02:0,21,237	0/0:6,0:5:15.05:0,15,179	0/0:5,0:5:15.05:0,15,179	0/0:8,0:8:18.03:0,18,195	0/0:5,0:6:11.87:0,12,123	0/0:5,0:5:12.02:0,12,131	1/1:4,14:18:27.03:260,27,0	1/1:1,10:11:30.05:290,30,0	0/0:8,0:7:12.04:0,12,145	0/0:3,0:3:6:0,6,53	1/1:12,0:10:19.27:97,19,0	1/1:13,0:11:11:52,11,0	1/1:18,0:18:7.92:32,8,0	1/1:0,12:12:27.04:260,27,0	0/0:9,0:9:21.06:0,21,246	0/0:4,0:4:9.03:0,9,108	0/0:8,0:8:12.03:0,12,139	1/1:2,9:11:30.05:289,30,0	1/1:26,0:26:48.21:192,48,0	1/1:2,1:3:3:29,3,0
chr10	103833549	.	GGGAGA	G	2452.28	PASS	AB=0.986;AC=15;AF=0.268;AN=56;BaseQRankSum=2.034;DP=348;FS=14.183;HRun=0;HaplotypeScore=68.3144;InbreedingCoeff=0.4923;MQ=64.33;MQ0=20;MQRankSum=-3.925;QD=16.24;ReadPosRankSum=1.015;VQSLOD=1.3931;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:39.13:0,39,1034	0/0:1,0:1:3.01:0,3,94	0/0:37,0:11:3.96:0,4,158	0/0:51,0:10:19.15:0,19,298	0/1:16,0:15:18.31:18,0,514	0/0:2,0:2:5.91:0,6,110	0/0:8,0:8:24.06:0,24,579	1/1:4,11:14:33.07:528,33,0	0/0:8,0:8:21.03:0,21,549	0/0:8,0:7:18.06:0,18,422	0/0:6,0:6:18.06:0,18,427	0/0:9,0:9:21.04:0,21,469	0/0:4,0:4:12.04:0,12,353	0/0:5,0:5:15.03:0,15,288	0/1:17,0:17:4.02:4,0,374	0/0:11,0:11:4.37:0,4,458	0/0:8,0:7:18.06:0,18,487	0/0:4,0:4:8.38:0,8,127	1/1:4,8:10:20.93:428,21,0	1/1:3,8:9:15:267,15,0	1/1:9,16:24:9.91:191,10,0	0/1:13,0:12:1.54:2,0,347	0/0:8,0:8:21.07:0,21,529	0/0:3,0:3:9.03:0,9,244	0/0:6,0:6:15.05:0,15,449	0/1:12,0:13:34.09:34,0,373	1/1:0,25:25:57.15:1150,57,0	0/1:4,0:4:3.97:4,0,41
chr10	103834706	.	TGGG	T	3060.11	PASS	AB=0.632;AC=23;AF=0.411;AN=56;BaseQRankSum=2.503;DP=386;FS=24.200;HRun=12;HaplotypeScore=70.7384;InbreedingCoeff=0.8004;MQ=74.33;MQ0=1;MQRankSum=-3.067;QD=15.86;ReadPosRankSum=8.507;VQSLOD=-0.3027;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:24:14.99:0,15,173	0/0:3,0:3:0:0,0,0	0/0:15,0:13:8.01:0,8,213	0/0:13,0:12:20.95:0,21,248	1/1:1,11:12:30.10:378,30,0	0/0:14,0:14:8.99:0,9,101	0/1:10,1:24:12.01:12,0,158	1/1:7,0:23:44.10:272,44,0	0/0:14,0:14:20.71:0,21,332	0/0:13,0:13:8.98:0,9,105	0/0:4,0:9:8.97:0,9,69	0/0:10,0:11:18.02:0,18,236	0/0:8,0:8:6.02:0,6,85	0/0:14,0:14:26.98:0,27,419	1/1:4,19:23:54.17:677,54,0	1/1:4,8:13:27.01:318,27,0	0/0:20,0:20:18.50:0,19,262	0/0:8,0:10:10.28:0,10,152	1/1:4,0:13:23.43:141,23,0	1/1:4,0:10:20.58:125,21,0	1/1:6,0:30:38.22:233,38,0	1/1:2,10:12:27.07:341,27,0	0/0:2,0:2:0:0,0,0	0/0:11,0:13:17.74:0,18,254	0/0:9,0:10:12.01:0,12,134	1/1:8,15:23:48.11:604,48,0	1/1:1,0:7:14.70:90,15,0	1/1:1,2:3:6.02:76,6,0
chr10	103834716	.	GGGT	G	965.55	PASS	AB=0.904;AC=10;AF=0.179;AN=56;BaseQRankSum=5.846;DP=334;FS=11.123;HRun=0;HaplotypeScore=70.7488;InbreedingCoeff=0.4849;MQ=67.91;MQ0=1;MQRankSum=-5.439;QD=10.38;ReadPosRankSum=8.312;VQSLOD=1.2932;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:44.87:0,45,468	0/0:1,0:1:2.96:0,3,19	0/0:14,0:12:22.98:0,23,288	0/0:9,0:8:21.01:0,21,310	1/1:12,1:13:6.72:150,7,0	0/0:8,0:8:15:0,15,141	0/0:19,0:19:24.87:0,25,357	0/0:17,0:17:1.02:0,1,42	0/0:11,0:11:26.67:0,27,474	0/0:8,0:8:12.88:0,13,158	0/0:9,0:9:20.71:0,21,166	0/0:7,0:7:18.05:0,18,283	0/0:7,0:7:15.02:0,15,195	0/0:14,0:14:29.96:0,30,529	1/1:19,2:21:52.24:357,52,0	0/1:10,2:12:2.14:150,0,2	0/0:13,0:13:24.51:0,25,390	0/0:11,0:11:29.57:0,30,380	0/0:11,0:11:8.67:0,9,56	0/1:9,0:9:2.38:20,0,2	0/0:28,0:28:24.76:0,25,111	1/1:11,0:11:26.45:189,26,0	0/0:1,0:1:3:0,3,25	0/0:14,0:14:35.36:0,35,455	0/0:11,0:11:23.93:0,24,297	0/1:22,1:23:60.92:210,0,61	0/0:6,0:6:3.30:0,3,14	0/1:3,1:4:8:43,0,8
chr10	103837156	.	T	TGTGG	2114.67	PASS	AB=0.718;AC=17;AF=0.304;AN=56;BaseQRankSum=3.487;DP=502;FS=0.516;HRun=0;HaplotypeScore=92.6619;InbreedingCoeff=0.5280;MQ=74.63;MQ0=1;MQRankSum=-2.225;QD=14.39;ReadPosRankSum=-2.038;VQSLOD=2.8312;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:79.74:0,80,1021	0/0:8,0:8:21.06:0,21,400	0/0:29,0:27:59.80:0,60,847	0/0:23,0:20:42.65:0,43,699	1/1:1,6:10:5.98:101,6,0	0/0:20,0:20:57.13:0,57,990	0/0:30,0:29:87.19:0,87,1449	0/1:4,0:10:54.25:68,0,54	0/0:16,0:16:48.03:0,48,702	0/0:19,0:19:53.72:0,54,844	0/0:11,0:11:33.07:0,33,511	0/0:20,0:20:57.16:0,57,1046	0/0:18,0:18:54.12:0,54,910	0/0:24,0:24:68.28:0,68,904	1/1:3,11:19:18.48:424,18,0	1/1:1,15:23:32.78:796,33,0	0/0:33,0:33:96.09:0,96,1490	0/0:27,0:27:78.12:0,78,1309	0/1:5,0:10:61.38:101,0,61	0/1:7,0:7:7.97:8,0,59	0/1:10,0:26:51.59:59,0,52	1/1:6,9:16:12.04:323,12,0	0/0:10,0:10:24.03:0,24,402	0/0:20,0:20:54.16:0,54,1034	0/0:15,0:15:42.12:0,42,755	1/1:4,7:16:18.65:371,19,0	0/1:4,0:7:27.10:27,0,33	1/1:1,1:2:3.85:22,4,0
chr10	103839214	.	C	CTGT	14636.83	PASS	AB=0.929;AC=23;AF=0.411;AN=56;BaseQRankSum=-15.877;DP=666;FS=0.000;HRun=0;HaplotypeScore=91.5579;InbreedingCoeff=0.9142;MQ=90.16;MQ0=0;MQRankSum=-5.064;QD=52.65;ReadPosRankSum=-0.204;VQSLOD=6.8284;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,1948	0/0:10,0:10:30.10:0,30,529	0/0:24,0:24:66.21:0,66,1127	0/0:31,0:31:86.76:0,87,1434	1/1:1,15:18:45.11:974,45,0	0/0:26,0:26:72.25:0,72,1270	0/0:23,0:23:63.22:0,63,1104	1/1:8,22:33:96.30:2097,96,0	0/1:24,2:26:69.46:69,0,1063	0/0:17,0:17:48.16:0,48,847	0/0:15,0:15:45.14:0,45,766	0/0:29,0:29:87.28:0,87,1499	0/0:30,0:30:81.25:0,81,1398	0/0:31,0:30:93.29:0,93,1585	1/1:1,20:21:57.20:1347,57,0	1/1:3,23:26:72.25:1700,72,0	0/0:33,0:33:96.33:0,96,1685	0/0:23,0:23:69.24:0,69,1187	1/1:1,12:14:39.12:877,39,0	1/1:4,20:23:60.09:1252,60,0	1/1:3,23:29:57.20:1348,57,0	1/1:3,18:22:51.17:1136,51,0	0/0:20,0:20:57.16:0,57,948	0/0:23,0:23:69.24:0,69,1218	0/0:13,0:13:36.12:0,36,635	1/1:4,18:23:7.25:1228,7,0	1/1:1,24:28:72.25:1687,72,0	1/1:0,14:14:39.13:922,39,0
chr10	103840178	.	G	GAC	10662.39	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-14.492;DP=760;FS=20.685;HRun=0;HaplotypeScore=128.4437;InbreedingCoeff=0.9844;MQ=63.62;MQ0=0;MQRankSum=-0.600;QD=39.64;ReadPosRankSum=1.090;VQSLOD=4.3865;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,114,1503	0/0:11,0:11:33.11:0,33,452	0/0:38,0:34:81.21:0,81,1006	0/0:35,0:34:71.17:0,71,982	1/1:1,14:15:24.08:425,24,0	0/0:22,0:22:54.05:0,54,707	0/0:27,0:27:69.17:0,69,913	1/1:6,25:32:75.23:1261,75,0	0/0:26,0:26:69.20:0,69,913	0/0:47,0:47:99:0,120,1593	0/0:22,0:22:57.14:0,57,735	0/0:34,0:34:90.21:0,90,1178	0/0:25,0:25:72.21:0,72,952	0/0:31,0:31:81.24:0,81,1111	1/1:1,31:32:78.27:1381,78,0	1/1:1,26:28:57.20:1010,57,0	0/0:34,0:34:86.22:0,86,1100	0/0:21,0:21:39.43:0,39,545	1/1:6,22:28:69.21:1193,69,0	1/1:0,20:20:36.10:637,36,0	1/1:10,37:47:99:1960,114,0	1/1:1,17:18:36.12:638,36,0	0/0:11,0:11:27.05:0,27,335	0/0:39,0:39:99:0,99,1337	0/0:19,0:19:48.16:0,48,659	1/1:9,25:34:55.08:1520,55,0	1/1:2,10:12:30.10:531,30,0	1/1:0,3:3:6.02:106,6,0
chr10	103840460	.	CATAT	C	657.35	PASS	AB=0.826;AC=6;AF=0.107;AN=56;BaseQRankSum=9.388;DP=1009;FS=0.000;HRun=0;HaplotypeScore=222.7288;InbreedingCoeff=-0.1111;MQ=55.51;MQ0=4;MQRankSum=-3.300;QD=2.76;ReadPosRankSum=-4.890;VQSLOD=1.3091;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,124,3366	0/0:12,0:12:36.08:0,36,908	0/0:54,0:38:42.37:0,42,2079	0/0:53,0:35:87.21:0,87,1943	0/1:15,17:32:1.35:1,0,712	0/0:16,0:16:45.14:0,45,1188	0/0:30,0:30:84.27:0,84,2227	0/1:47,9:54:45.18:45,0,3270	0/0:40,0:40:99:0,108,2752	0/0:47,0:46:99:0,132,3347	0/0:19,0:19:54.19:0,54,1415	0/0:29,0:29:81.28:0,81,2172	0/0:35,0:35:99:0,102,2587	0/0:33,0:33:96.33:0,96,2580	0/0:29,7:36:39.06:0,39,1031	0/0:27,13:40:45.13:0,45,1198	0/0:42,0:42:96.98:0,97,2513	0/1:34,0:34:2.14:2,0,1887	0/1:21,7:23:99:156,0,1133	0/0:18,12:30:45.15:0,45,1259	0/0:71,6:77:43.52:0,44,3291	0/0:18,4:22:44.86:0,45,1244	0/0:12,0:12:36.12:0,36,970	0/0:54,0:53:99:0,141,3724	0/0:24,0:24:68.94:0,69,1836	0/1:42,10:52:99:316,0,3048	0/1:27,9:36:99:248,0,1716	0/0:7,2:9:1.77:0,2,407
chr10	103840625	.	CTTGCT	C	8686.53	PASS	AB=0.541;AC=21;AF=0.404;AN=52;BaseQRankSum=15.223;DP=405;FS=32.383;HRun=0;HaplotypeScore=114.4165;InbreedingCoeff=0.9066;MQ=47.12;MQ0=4;MQRankSum=-14.268;QD=44.32;ReadPosRankSum=0.690;VQSLOD=2.9364;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:48.12:0,48,1450	0/0:4,0:4:12.04:0,12,344	./.	./.	1/1:1,27:29:77.08:1177,77,0	0/0:9,0:9:21.07:0,21,604	0/0:11,0:10:24.08:0,24,799	1/1:4,20:22:63.18:1081,63,0	0/0:17,0:16:48.16:0,48,1547	0/0:8,0:8:24.08:0,24,776	0/0:5,0:5:12.04:0,12,396	0/0:12,0:12:36.12:0,36,1163	0/0:10,0:9:18.06:0,18,599	0/0:14,0:14:39.13:0,39,1271	1/1:1,22:24:72.24:1201,72,0	1/1:0,12:12:30.10:528,30,0	0/0:23,0:23:69.24:0,69,2231	0/0:31,0:31:87.26:0,87,2603	1/1:3,14:15:42.14:779,42,0	1/1:2,16:19:52.76:788,53,0	1/1:1,7:8:20.39:255,20,0	1/1:1,16:16:42.14:703,42,0	0/0:10,0:10:24.97:0,25,752	0/0:20,0:20:60.16:0,60,1791	0/0:13,0:13:27.07:0,27,893	0/1:3,16:20:99:855,0,117	1/1:1,17:18:54.18:937,54,0	1/1:2,6:8:21.07:383,21,0
chr10	103840631	.	AG	A	3197.88	PASS	AB=0.556;AC=21;AF=0.404;AN=52;BaseQRankSum=15.601;DP=400;FS=20.610;HRun=2;HaplotypeScore=107.1869;InbreedingCoeff=0.8743;MQ=45.02;MQ0=6;MQRankSum=-14.099;QD=15.83;ReadPosRankSum=1.509;VQSLOD=2.4934;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:42.14:0,42,629	0/0:3,0:3:9.03:0,9,135	./.	./.	1/1:2,27:29:40.40:399,40,0	0/0:6,0:6:15.05:0,15,224	0/0:11,0:10:27.09:0,27,405	1/1:3,20:19:52.28:446,52,0	0/0:17,0:16:48.16:0,48,716	0/0:7,0:7:21.07:0,21,314	0/0:5,0:5:15.05:0,15,225	0/0:13,0:13:39.13:0,39,585	0/0:12,0:11:24.08:0,24,354	0/0:13,0:13:36.12:0,36,537	1/1:3,22:25:66.13:447,66,0	1/1:2,12:14:29.83:219,30,0	0/0:22,0:22:66.22:0,66,989	0/0:29,0:29:78.21:0,78,1125	1/1:3,14:14:41.91:346,42,0	1/1:2,16:18:14.54:248,15,0	1/1:1,7:8:2.95:60,3,0	1/1:2,16:17:41.46:283,41,0	0/0:9,0:9:21.07:0,21,313	0/0:20,0:20:60.20:0,60,899	0/0:12,0:12:27.06:0,27,365	0/1:4,16:20:38.61:338,0,39	1/1:4,16:19:58.93:407,59,0	1/1:4,6:10:26.92:212,27,0
chr10	103841368	.	G	GC	11118.24	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-17.827;DP=711;FS=2.802;HRun=1;HaplotypeScore=69.3898;InbreedingCoeff=0.9994;MQ=84.54;MQ0=0;MQRankSum=-1.662;QD=42.27;ReadPosRankSum=0.862;VQSLOD=5.3460;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,162,2054	0/0:10,0:10:30.10:0,30,387	0/0:26,0:26:71.02:0,71,877	0/0:22,0:22:53.99:0,54,639	1/1:0,31:31:93.32:1394,93,0	0/0:21,0:21:63.20:0,63,818	0/0:32,0:32:87.27:0,87,1115	1/1:0,26:26:75.25:1113,75,0	0/0:30,0:30:84.27:0,84,1089	0/0:21,0:21:63.20:0,63,817	0/0:9,0:9:27.09:0,27,350	0/0:26,0:26:78.25:0,78,1012	0/0:21,0:21:57.18:0,57,740	0/0:27,0:27:81.25:0,81,1036	1/1:0,21:21:57.19:854,57,0	1/1:0,21:21:63.21:944,63,0	0/0:37,0:37:99:0,108,1385	0/0:24,0:24:69.22:0,69,894	1/1:0,18:18:54.18:807,54,0	1/1:0,24:24:63.21:944,63,0	1/1:0,37:37:99:1529,102,0	1/1:1,22:23:60.20:899,60,0	0/0:31,0:31:93.29:0,93,1193	0/0:29,0:29:84.27:0,84,1090	0/0:28,0:28:75.24:0,75,974	1/1:2,27:29:23.54:1150,24,0	1/1:0,20:20:60.20:899,60,0	1/1:0,13:13:39.13:585,39,0
chr10	103842912	.	TA	T	5176.99	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=12.665;DP=508;FS=1.578;HRun=9;HaplotypeScore=51.4412;InbreedingCoeff=0.9763;MQ=77.89;MQ0=0;MQRankSum=-0.782;QD=22.81;ReadPosRankSum=0.569;VQSLOD=5.5152;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:33.03:0,33,364	0/0:7,0:7:4.10:0,4,159	0/0:15,0:15:26.02:0,26,262	0/0:9,0:10:21:0,21,209	1/1:3,28:31:74.95:676,75,0	0/0:15,0:15:36.11:0,36,415	0/0:12,0:12:36.10:0,36,408	1/1:5,21:26:57.01:517,57,0	0/0:10,0:10:27.08:0,27,312	0/0:21,0:21:54.16:0,54,621	0/0:24,0:24:66.12:0,66,736	0/0:12,0:12:33.10:0,33,381	0/0:8,0:8:21.04:0,21,222	0/0:9,0:10:26.91:0,27,291	1/1:4,11:15:33.01:302,33,0	1/1:1,14:15:39.02:357,39,0	0/0:38,0:38:99:0,102,1176	0/0:20,0:20:54.13:0,54,609	1/1:7,16:23:44.14:429,44,0	1/1:2,19:21:53.99:487,54,0	1/1:0,11:11:27.01:247,27,0	1/1:2,22:24:66.04:604,66,0	0/0:25,0:25:69.18:0,69,779	0/0:13,0:13:35.94:0,36,395	0/0:27,0:27:75.20:0,75,849	1/1:1,17:18:19.41:432,19,0	1/1:2,17:19:51.03:467,51,0	1/1:0,24:24:72.04:659,72,0
chr10	103843056	.	T	TGGG	817.80	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=3.054;DP=482;FS=0.000;HRun=8;HaplotypeScore=83.1950;InbreedingCoeff=0.8561;MQ=61.66;MQ0=18;MQRankSum=-4.539;QD=14.10;ReadPosRankSum=-1.710;VQSLOD=-0.0276;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:58.97:0,59,748	0/0:1,0:1:3.01:0,3,39	0/0:50,0:12:5.33:0,5,106	0/0:52,0:18:20.36:0,20,270	0/0:16,0:16:33.10:0,33,413	0/0:9,0:9:27.09:0,27,348	0/0:14,0:14:39:0,39,470	1/1:3,4:7:9.03:164,9,0	0/0:15,0:15:35.99:0,36,472	0/0:22,0:22:60.14:0,60,724	0/0:13,0:13:39.08:0,39,493	0/0:17,0:17:51.17:0,51,669	0/0:21,0:21:51.92:0,52,709	0/0:20,0:20:42.09:0,42,551	0/0:15,0:15:36.10:0,36,467	0/0:6,0:6:15.05:0,15,192	0/0:27,0:27:72.01:0,72,931	0/0:16,0:16:48.12:0,48,606	1/1:9,5:14:11.95:136,12,0	1/1:7,3:10:8.90:131,9,0	1/1:7,2:13:5.63:68,6,0	0/0:8,0:8:15.04:0,15,191	0/0:18,0:19:32.25:0,32,466	0/0:20,0:20:48.12:0,48,598	0/0:18,0:18:48.12:0,48,612	0/0:14,0:14:26.62:0,27,332	1/1:5,9:14:24.08:476,24,0	0/0:7,0:7:11.98:0,12,156
chr10	103843068	.	GCA	G	897.24	PASS	AB=0.885;AC=26;AF=0.542;AN=48;BaseQRankSum=7.115;DP=446;FS=9.249;HRun=0;HaplotypeScore=58.7405;InbreedingCoeff=0.2003;MQ=52.33;MQ0=23;MQRankSum=-0.618;QD=3.16;ReadPosRankSum=-1.980;VQSLOD=0.3587;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,7:34:99:123,0,270	./.	0/0:44,0:6:0:0,0,0	0/1:47,0:8:0:0,0,0	1/1:11,2:14:3.48:33,3,0	1/1:9,0:9:3.01:32,3,0	0/1:13,4:19:27.18:146,0,27	./.	0/0:14,0:15:3.91:0,4,209	0/0:17,0:17:12.04:0,12,174	0/1:13,0:13:26.48:26,0,39	0/0:18,0:18:12:0,12,119	1/1:14,5:21:26.31:204,26,0	0/0:16,0:16:6.02:0,6,89	1/1:7,6:14:17.88:177,18,0	1/1:4,0:6:2.84:14,3,0	0/1:27,5:31:81.87:82,0,474	0/0:20,0:21:13.87:0,14,324	./.	0/1:3,0:4:0:0,0,0	./.	1/1:6,4:9:6.02:65,6,0	0/0:16,0:16:12.04:0,12,173	0/1:19,3:23:14.49:14,0,166	0/1:15,1:16:17.46:17,0,163	1/1:9,0:9:0.47:1,0,0	1/1:6,0:7:2.84:14,3,0	1/1:3,1:6:11.70:93,12,0
chr10	103843873	.	C	CTTGTGT	614.44	PASS	AB=0.926;AC=6;AF=0.107;AN=56;BaseQRankSum=6.617;DP=784;FS=2.181;HRun=0;HaplotypeScore=196.7137;InbreedingCoeff=-0.1174;MQ=56.29;MQ0=12;MQRankSum=-4.386;QD=3.72;ReadPosRankSum=-6.091;VQSLOD=0.8490;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:96.20:0,96,1746	0/0:6,0:6:18.02:0,18,361	0/0:60,0:19:39.65:0,40,391	0/0:69,0:20:26.62:0,27,254	0/1:10,0:11:3.38:3,0,48	0/0:21,0:21:42.14:0,42,935	0/0:35,0:35:99:0,99,1674	0/1:46,0:45:99:269,0,351	0/0:25,0:25:68.05:0,68,1140	0/0:21,0:21:60.19:0,60,1229	0/0:6,0:6:12.04:0,12,271	0/0:30,0:30:81.19:0,81,1585	0/0:18,0:18:50.91:0,51,940	0/0:26,0:26:69.14:0,69,1270	0/0:31,0:30:5.93:0,6,218	0/0:22,0:21:37.69:0,38,241	0/0:45,0:45:99:0,115,1885	0/0:28,0:28:62.33:0,62,1060	0/1:17,0:17:39.71:93,0,40	0/1:7,4:16:15.69:16,0,32	0/1:52,0:52:17.80:18,0,149	0/0:19,0:20:18.51:0,19,131	0/0:6,0:6:15.05:0,15,318	0/0:45,0:45:99:0,102,2039	0/0:19,0:18:50.88:0,51,819	0/0:35,0:35:66.74:0,67,390	0/1:23,0:23:23.23:333,0,23	0/0:12,0:12:28.84:0,29,187
chr10	103843874	.	T	TTGTGTG	2074.42	PASS	AB=0.761;AC=19;AF=0.339;AN=56;BaseQRankSum=5.479;DP=818;FS=0.483;HRun=0;HaplotypeScore=198.7906;InbreedingCoeff=0.4540;MQ=54.26;MQ0=12;MQRankSum=-7.516;QD=4.64;ReadPosRankSum=-7.401;VQSLOD=-0.4567;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:40:78.21:0,78,1385	0/0:6,0:6:15.05:0,15,317	0/1:59,0:19:16.77:17,0,93	0/1:69,0:20:0.17:0,0,26	0/1:8,0:15:3.04:22,0,3	0/0:21,0:21:42.13:0,42,813	0/0:34,0:35:72.20:0,72,1266	1/1:50,0:48:72.37:887,72,0	0/0:25,0:25:65.83:0,66,1079	0/0:21,0:21:57.18:0,57,1049	0/0:6,0:6:12.04:0,12,225	0/0:32,0:32:71.12:0,71,1347	0/0:18,0:18:31.02:0,31,763	0/0:25,0:26:63.20:0,63,1184	0/1:14,0:33:47.69:147,0,48	0/1:11,0:22:22.37:22,0,27	0/0:43,0:45:46.76:0,47,1432	0/0:25,0:28:48.14:0,48,844	1/1:18,0:19:21.22:281,21,0	1/1:15,1:16:9:96,9,0	1/1:23,33:64:8.31:88,8,0	0/1:11,0:22:11.36:86,0,11	0/0:7,0:7:15.04:0,15,263	0/0:40,0:42:57.26:0,57,1627	0/0:19,0:18:45.09:0,45,814	0/1:20,0:36:65.52:107,0,66	1/1:6,17:26:18.05:459,18,0	1/1:8,0:13:3.84:47,4,0
chr10	103843902	.	C	CTG	2119.39	PASS	AB=0.676;AC=11;AF=0.196;AN=56;BaseQRankSum=9.303;DP=799;FS=2.501;HRun=0;HaplotypeScore=149.8727;InbreedingCoeff=0.6713;MQ=54.94;MQ0=15;MQRankSum=-3.672;QD=15.36;ReadPosRankSum=-0.761;VQSLOD=3.7343;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:84.18:0,84,978	0/0:8,0:8:18.05:0,18,218	0/0:48,0:11:13.98:0,14,111	0/0:61,0:17:1.35:0,1,115	1/1:4,13:17:5.89:97,6,0	0/0:27,0:27:60.16:0,60,704	0/0:37,0:37:81.23:0,81,969	0/0:52,0:50:86.70:0,87,992	0/0:30,0:31:74.99:0,75,874	0/0:23,0:23:47.93:0,48,550	0/0:11,0:11:24.02:0,24,273	0/0:32,0:34:86.48:0,86,972	0/0:15,0:15:39.11:0,39,461	0/0:26,0:26:69.15:0,69,785	1/1:13,19:31:2.53:454,3,0	0/1:12,11:22:42.48:324,0,42	0/0:35,0:35:68.27:0,68,886	0/0:25,0:25:57.12:0,57,671	0/0:23,0:22:36.07:0,36,412	0/0:12,0:12:5.89:0,6,73	0/0:59,0:59:47.43:0,47,580	1/1:6,14:23:0.79:111,1,0	0/0:12,0:12:26.98:0,27,305	0/0:43,0:43:93:0,93,1058	0/0:17,0:16:45.14:0,45,546	1/1:10,21:32:43.85:1069,44,0	0/0:24,0:24:8.59:0,9,139	1/1:6,5:11:15.04:216,15,0
chr10	103844117	.	ATTT	A	1990.50	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=5.427;DP=495;FS=0.000;HRun=13;HaplotypeScore=78.3475;InbreedingCoeff=0.9159;MQ=67.98;MQ0=1;MQRankSum=0.120;QD=17.46;ReadPosRankSum=0.299;VQSLOD=2.3347;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:77.22:0,77,1272	0/0:7,0:7:18.04:0,18,311	0/1:16,0:10:1.87:2,0,3	0/0:16,0:7:4.71:0,5,38	0/0:24,0:24:54.16:0,54,918	0/0:16,0:16:45.13:0,45,794	0/0:20,0:22:48.13:0,48,825	1/1:9,13:22:36:424,36,0	0/0:12,0:12:33.10:0,33,600	0/0:19,0:21:45.13:0,45,778	0/0:10,0:11:25.33:0,25,450	0/0:14,0:14:36.11:0,36,612	0/0:11,0:11:33.09:0,33,563	0/0:14,0:14:42.14:0,42,749	0/0:16,0:15:42.13:0,42,719	0/0:10,0:10:27.06:0,27,482	0/0:29,0:29:75.23:0,75,1371	0/0:20,0:21:57.16:0,57,1020	1/1:4,19:23:54:609,54,0	1/1:4,21:25:28.32:587,28,0	1/1:7,7:14:17.96:219,18,0	0/0:19,0:22:51.59:0,52,849	0/0:18,0:20:54.16:0,54,944	0/0:26,0:27:81.11:0,81,1272	0/0:15,0:16:45:0,45,707	0/0:16,0:16:42.14:0,42,748	1/1:3,11:14:26.95:324,27,0	0/0:7,0:8:24.05:0,24,393
chr10	103845812	.	TCCCTCCACCCAC	T	4174.99	PASS	AC=22;AF=0.440;AN=50;BaseQRankSum=7.153;DP=278;FS=23.239;HRun=0;HaplotypeScore=102.1942;InbreedingCoeff=0.6516;MQ=93.37;MQ0=1;MQRankSum=-3.655;QD=27.65;ReadPosRankSum=-0.005;VQSLOD=1.0344;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:6.02:0,6,167	0/0:2,0:2:3.01:0,3,177	1/1:11,0:11:2.80:13,3,0	./.	1/1:6,6:12:18.06:392,18,0	0/0:4,0:4:1.25:0,1,3	0/0:7,0:7:5.98:0,6,196	1/1:11,6:17:18.03:333,18,0	0/0:6,0:6:6.02:0,6,352	0/0:6,0:6:3.01:0,3,177	./.	0/0:7,0:7:6.02:0,6,245	0/0:13,0:13:21.07:0,21,1017	0/0:8,0:8:15.05:0,15,816	1/1:5,6:11:18.06:627,18,0	1/1:8,12:20:33.11:1149,33,0	0/0:5,0:5:3.01:0,3,177	0/0:11,0:11:12.04:0,12,542	1/1:12,0:12:3:25,3,0	1/1:9,7:16:15.02:308,15,0	1/1:8,4:12:3.01:37,3,0	1/1:11,7:18:15.05:455,15,0	0/0:9,0:9:3.01:0,3,167	0/0:6,0:6:6.02:0,6,329	0/0:7,0:7:3.01:0,3,177	1/1:8,4:12:15.05:522,15,0	1/1:2,8:10:8.94:313,9,0	./.
chr10	103847066	.	GA	G	12233.22	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.489;DP=771;FS=1.496;HRun=1;HaplotypeScore=79.7106;InbreedingCoeff=1.0000;MQ=82.74;MQ0=0;MQRankSum=-3.202;QD=38.84;ReadPosRankSum=1.061;VQSLOD=5.4630;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,2201	0/0:15,0:15:45.15:0,45,716	0/0:24,0:24:66.21:0,66,976	0/0:19,0:20:53.73:0,54,749	1/1:0,27:27:75.25:1026,75,0	0/0:23,0:23:69.20:0,69,1072	0/0:39,0:39:99:0,108,1641	1/1:0,37:37:99:1431,105,0	0/0:34,0:34:99:0,102,1593	0/0:28,0:28:84.21:0,84,1289	0/0:15,0:15:45.13:0,45,674	0/0:27,0:27:81.24:0,81,1242	0/0:20,0:20:60.20:0,60,955	0/0:26,0:26:78.12:0,78,1186	1/1:1,27:28:71.90:1006,72,0	1/1:0,35:35:99:1384,99,0	0/0:36,0:36:99:0,108,1690	0/0:28,0:28:84.21:0,84,1279	1/1:0,24:24:72.21:968,72,0	1/1:0,35:35:99:1424,105,0	1/1:0,43:43:99:1594,114,0	1/1:0,23:23:63.21:878,63,0	0/0:17,0:17:51.16:0,51,788	0/0:29,0:28:87.30:0,87,1375	0/0:29,0:29:84.26:0,84,1312	1/1:0,26:26:78.24:1057,78,0	1/1:0,22:22:60.20:839,60,0	1/1:0,15:15:45.15:628,45,0
chr10	103847386	.	A	AGTGTGTGTGTGTGTGT	4477.03	PASS	AB=0.904;AC=13;AF=0.232;AN=56;BaseQRankSum=-1.307;DP=832;FS=1.350;HRun=0;HaplotypeScore=353.6249;InbreedingCoeff=0.6499;MQ=62.16;MQ0=5;MQRankSum=-4.670;QD=21.73;ReadPosRankSum=-1.474;VQSLOD=2.6810;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:65:99:0,144,5482	0/0:13,0:13:32.41:0,32,1153	0/0:42,0:33:26.01:0,26,1238	0/1:38,0:29:10.60:11,0,620	1/1:28,0:28:8.69:144,9,0	0/0:23,0:23:48.15:0,48,1862	0/0:26,0:28:66.19:0,66,2287	0/0:27,0:28:32.40:0,32,929	0/0:35,0:36:87.28:0,87,3233	0/0:46,0:46:99:0,99,3979	0/0:22,0:22:39.12:0,39,1376	0/0:30,0:31:54.15:0,54,2055	0/0:31,0:31:69.21:0,69,2440	0/0:32,0:32:78.22:0,78,3040	1/1:14,9:29:15.52:1026,16,0	1/1:14,11:33:21.07:1424,21,0	0/0:27,0:28:66.23:0,66,2562	0/1:13,0:13:22.48:22,0,948	0/0:22,0:21:25.23:0,25,1216	0/0:28,0:28:66.22:0,66,2582	0/0:60,0:62:99:0,109,4582	1/1:14,8:29:5.93:438,6,0	0/0:15,0:16:48.14:0,48,1712	0/0:31,0:31:81.19:0,81,2887	0/0:17,0:17:39.12:0,39,1509	0/1:16,7:26:99:843,0,104	0/0:24,0:24:66.18:0,66,2330	1/1:4,1:8:9.03:569,9,0
chr10	103848695	.	CTT	C	914.72	PASS	AB=0.988;AC=12;AF=0.214;AN=56;BaseQRankSum=0.770;DP=555;FS=4.995;HRun=16;HaplotypeScore=85.5904;InbreedingCoeff=0.6959;MQ=64.11;MQ0=25;MQRankSum=2.064;QD=5.65;ReadPosRankSum=0.475;VQSLOD=0.1575;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,1:43:71.52:0,72,1003	0/1:6,0:6:2.20:2,0,137	0/1:38,1:14:8.47:8,0,51	0/0:32,0:12:5.46:0,5,79	0/0:16,0:23:30.45:0,30,309	0/0:14,0:15:29.43:0,29,344	0/0:10,0:9:20.47:0,20,202	1/1:21,12:38:3.84:289,4,0	0/0:8,0:12:25.77:0,26,262	0/0:19,0:21:44.87:0,45,512	0/0:16,0:19:10.44:0,10,291	0/0:7,0:7:14.10:0,14,119	0/0:7,0:7:14.40:0,14,144	0/0:15,0:16:38.92:0,39,429	0/0:7,0:12:15.02:0,15,142	0/0:5,0:5:12.02:0,12,114	0/0:31,0:30:61.79:0,62,687	0/0:16,0:14:22.24:0,22,224	1/1:13,10:23:17.35:250,17,0	1/1:15,5:22:4.16:131,4,0	1/1:5,11:18:28.35:265,28,0	0/0:11,0:14:23.99:0,24,233	0/0:20,1:26:35.84:0,36,424	0/0:8,0:8:9.03:0,9,116	0/0:10,0:11:17.41:0,17,185	0/0:15,0:26:47.85:0,48,418	1/1:5,6:12:11.61:128,12,0	0/0:7,0:20:41.95:0,42,374
chr10	103850147	.	AACACACAC	A	3607.52	PASS	AB=0.760;AC=9;AF=0.161;AN=56;BaseQRankSum=7.721;DP=826;FS=14.542;HRun=0;HaplotypeScore=218.0701;InbreedingCoeff=0.8234;MQ=66.39;MQ0=7;MQRankSum=-8.233;QD=27.54;ReadPosRankSum=-1.421;VQSLOD=1.4024;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:57:99:0,114,3811	0/0:14,0:15:36.12:0,36,1186	0/0:37,0:28:18.06:0,18,347	0/0:35,0:24:18.06:0,18,507	0/0:20,0:18:12.04:0,12,349	0/0:21,0:24:51.17:0,51,1612	0/0:40,0:43:96.29:0,96,3246	0/1:13,6:19:61.01:290,0,61	0/0:32,0:34:66.22:0,66,2355	0/0:26,0:27:51.18:0,51,1886	0/0:22,0:24:54.18:0,54,1717	0/0:26,0:27:57.16:0,57,1975	0/0:25,0:25:48.16:0,48,1747	0/0:21,0:24:42.11:0,42,1491	0/0:31,0:29:12.04:0,12,302	0/0:16,0:26:24.08:0,24,627	0/0:35,0:40:81.28:0,81,2767	0/0:29,0:32:78.25:0,78,2722	1/1:16,7:23:21.07:415,21,0	1/1:6,27:34:60.20:1516,60,0	1/1:16,12:29:9.03:231,9,0	0/0:35,0:35:12:0,12,285	0/0:29,0:34:81.26:0,81,2777	0/0:36,0:41:93.32:0,93,3297	0/0:17,0:18:33.11:0,33,1246	0/0:31,0:29:72.22:0,72,2080	1/1:7,19:26:45.15:1156,45,0	0/0:12,0:10:18.06:0,18,342
chr10	103850815	.	GTA	G	2590.09	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=7.448;DP=607;FS=7.919;HRun=0;HaplotypeScore=112.9793;InbreedingCoeff=0.6046;MQ=53.67;MQ0=11;MQRankSum=-2.399;QD=8.09;ReadPosRankSum=-5.767;VQSLOD=0.8025;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:39:7.59:8,0,674	0/0:5,0:5:14.28:0,14,158	0/0:17,0:13:25.69:0,26,340	0/1:12,0:11:9.57:10,0,238	1/1:20,0:19:24.43:192,24,0	0/0:24,0:24:6.29:0,6,721	0/0:29,0:29:62.85:0,63,695	1/1:8,32:33:95.76:987,96,0	0/0:22,0:22:31.85:0,32,498	0/1:26,0:26:99:113,0,232	0/0:11,0:11:5.79:0,6,131	0/0:18,0:18:13.28:0,13,351	0/0:31,0:31:10.53:0,11,714	0/0:26,0:26:58.27:0,58,778	1/1:26,0:24:16.53:136,17,0	0/1:24,0:24:51.41:58,0,51	0/0:16,0:16:15.64:0,16,536	0/0:17,0:16:7.21:0,7,300	1/1:0,11:11:32.72:284,33,0	1/1:0,8:8:2.98:31,3,0	1/1:27,0:25:48.38:468,48,0	1/1:18,0:18:11.61:93,12,0	0/0:11,0:11:15.10:0,15,337	0/0:43,0:42:32.91:0,33,986	0/0:17,0:17:25.74:0,26,412	1/1:28,0:25:22.90:274,23,0	1/1:1,22:22:5.57:77,6,0	1/1:16,0:15:5.53:61,6,0
chr10	103850828	.	TGA	T	663.89	PASS	AB=0.943;AC=17;AF=0.327;AN=52;BaseQRankSum=2.417;DP=574;FS=8.530;HRun=0;HaplotypeScore=112.4202;InbreedingCoeff=-0.3444;MQ=52.41;MQ0=16;MQRankSum=0.627;QD=2.01;ReadPosRankSum=-0.176;VQSLOD=1.6379;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:38:87.79:88,0,320	1/1:5,0:5:3.01:33,3,0	./.	./.	0/0:18,0:17:20.99:0,21,183	0/1:23,0:23:10.94:11,0,114	0/1:23,0:24:51.79:52,0,129	0/0:34,0:26:5.94:0,6,41	0/1:14,1:15:24.02:24,0,81	0/1:16,13:29:99:253,0,237	0/1:13,0:13:24.25:24,0,177	0/1:16,3:19:20.56:21,0,104	0/0:29,0:29:8.50:0,8,301	0/0:24,0:24:23.75:0,24,318	0/1:23,0:21:8.72:9,0,66	0/0:23,0:23:12.42:0,12,116	0/1:16,1:17:20.09:20,0,194	0/1:14,2:15:87.02:87,0,89	0/1:10,0:10:12.73:13,0,29	0/0:8,0:8:0:0,0,0	0/0:20,0:19:17.78:0,18,154	0/0:24,0:24:29.88:0,30,259	0/1:13,0:13:10.69:11,0,198	0/1:41,1:42:76.52:77,0,456	0/1:18,1:18:79.88:80,0,230	0/0:25,0:22:29.73:0,30,311	0/1:21,0:21:10.84:11,0,20	0/0:18,0:16:11.69:0,12,84
chr10	103851098	.	T	TC	569.68	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-4.997;DP=211;FS=2.018;HRun=8;HaplotypeScore=23.6699;InbreedingCoeff=0.7149;MQ=77.87;MQ0=0;MQRankSum=-1.172;QD=18.99;ReadPosRankSum=-1.016;VQSLOD=2.1740;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:48.01:0,48,435	0/0:6,0:6:15.01:0,15,137	0/0:7,1:8:12:0,12,108	0/0:3,0:3:2.99:0,3,25	0/0:6,0:6:15.01:0,15,137	0/0:3,0:3:6:0,6,55	0/0:18,0:19:49.57:0,50,443	1/1:1,2:3:6.02:69,6,0	0/0:6,0:6:18.01:0,18,165	0/0:7,0:7:15.01:0,15,137	0/0:3,0:3:6:0,6,55	0/0:4,0:4:12.01:0,12,110	0/0:3,0:3:9:0,9,82	0/0:8,0:8:14.99:0,15,137	0/0:8,0:8:21:0,21,192	0/0:5,0:5:15.01:0,15,137	0/0:14,0:14:38.99:0,39,349	0/0:8,0:8:24.01:0,24,220	1/1:5,2:7:9.01:92,9,0	0/0:4,1:5:3:0,3,27	1/1:1,9:10:18.05:208,18,0	0/0:3,0:3:6:0,6,55	0/0:6,0:6:15:0,15,137	0/0:11,0:11:30.01:0,30,275	0/0:9,0:9:18:0,18,165	0/0:8,0:8:18:0,18,165	1/1:0,10:10:30.09:346,30,0	0/0:6,0:6:6:0,6,55
chr10	103851395	.	TA	T	1964.94	PASS	AB=0.875;AC=11;AF=0.196;AN=56;BaseQRankSum=8.879;DP=495;FS=4.231;HRun=8;HaplotypeScore=51.1840;InbreedingCoeff=0.8942;MQ=79.87;MQ0=0;MQRankSum=-1.316;QD=22.08;ReadPosRankSum=-1.058;VQSLOD=3.6273;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,2:48:99:0,103,1495	0/0:8,0:8:21.05:0,21,243	0/0:15,0:15:30.56:0,31,348	0/0:10,0:10:15.32:0,15,146	0/0:16,0:16:45.14:0,45,543	0/0:12,0:12:36.11:0,36,435	0/0:32,0:32:81.25:0,81,978	1/1:2,16:18:48.07:464,48,0	0/0:21,0:21:57.17:0,57,682	0/0:20,0:20:57.17:0,57,689	0/1:6,1:7:7.92:8,0,187	0/0:11,0:11:33.10:0,33,398	0/0:9,0:9:27.06:0,27,305	0/0:19,0:19:54.16:0,54,647	0/0:14,0:14:30.09:0,30,362	0/0:9,0:9:24.07:0,24,290	0/0:24,0:24:69.21:0,69,833	0/0:27,0:27:72.22:0,72,870	1/1:1,17:18:51.03:483,51,0	1/1:0,7:7:21.03:203,21,0	1/1:2,21:23:60.10:579,60,0	0/0:15,0:15:36.10:0,36,423	0/0:18,0:18:48.15:0,48,580	0/0:26,0:26:72.22:0,72,870	0/0:20,0:20:48.15:0,48,580	0/0:24,0:24:60.18:0,60,715	1/1:0,16:16:42.06:406,42,0	0/0:8,0:8:18.06:0,18,217
chr10	103852520	.	C	CT	5912.85	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-13.124;DP=626;FS=16.860;HRun=1;HaplotypeScore=59.5098;InbreedingCoeff=0.9828;MQ=90.24;MQ0=0;MQRankSum=-3.140;QD=44.13;ReadPosRankSum=-0.609;VQSLOD=2.7164;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,1716	0/0:5,0:5:15.05:0,15,210	0/0:29,0:29:80.49:0,80,1030	0/0:19,0:19:48.08:0,48,626	0/0:19,0:19:45.15:0,45,628	0/0:36,0:36:99:0,108,1506	0/0:26,0:26:78.25:0,78,1073	1/1:0,23:23:69.21:1055,69,0	0/0:16,0:16:48.16:0,48,667	0/0:19,0:19:54.18:0,54,755	0/0:15,0:15:42.14:0,42,587	0/0:27,0:27:81.17:0,81,1070	0/0:18,0:18:54.18:0,54,749	0/0:15,0:15:45.15:0,45,628	0/0:27,0:27:81.27:0,81,1118	0/0:18,0:18:54.18:0,54,750	0/0:25,0:25:75.24:0,75,1026	0/0:32,0:32:93.27:0,93,1277	1/1:1,16:17:48.13:740,48,0	1/1:0,20:20:57.19:911,57,0	1/1:0,56:56:99:2350,148,0	0/0:16,0:16:42.14:0,42,587	0/0:10,0:10:30.06:0,30,397	0/0:28,0:28:81.27:0,81,1132	0/0:22,0:22:66.22:0,66,922	0/0:24,0:24:72.23:0,72,990	1/1:0,18:18:54.18:857,54,0	0/0:3,0:3:9.03:0,9,126
chr10	103852793	.	ATTT	A	1354.79	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.547;DP=512;FS=1.834;HRun=16;HaplotypeScore=81.6383;InbreedingCoeff=0.9410;MQ=77.04;MQ0=0;MQRankSum=-1.364;QD=13.68;ReadPosRankSum=5.508;VQSLOD=1.6031;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:38:91.39:0,91,1303	0/0:6,0:6:12.02:0,12,183	0/0:21,0:18:29.66:0,30,379	0/0:11,0:9:14.94:0,15,124	1/1:5,14:20:26.55:259,27,0	0/0:10,0:13:24.04:0,24,354	0/0:20,0:23:44.13:0,44,632	0/0:15,0:28:58.86:0,59,818	0/0:17,0:18:48.12:0,48,705	0/0:11,0:13:30.08:0,30,431	0/0:12,0:14:30.07:0,30,468	0/0:10,0:17:36.03:0,36,467	0/0:19,0:21:48.10:0,48,676	0/0:18,0:18:48.12:0,48,725	1/1:5,8:13:17.86:192,18,0	1/1:5,9:15:19.12:222,19,0	0/0:24,0:31:78.17:0,78,1161	0/0:26,0:29:81.14:0,81,1221	0/0:15,0:18:39.13:0,39,610	0/0:6,0:15:33.07:0,33,449	0/0:10,0:18:15.05:0,15,212	1/1:3,12:17:23.57:247,24,0	0/0:6,0:7:21.04:0,21,299	0/0:22,0:22:57.64:0,58,890	0/0:15,0:16:45.08:0,45,618	1/1:9,17:27:3.37:483,3,0	0/0:14,0:14:42.12:0,42,593	1/1:2,5:7:11.94:129,12,0
chr10	103856632	.	TAC	T	2934.38	PASS	AB=0.901;AC=17;AF=0.304;AN=56;BaseQRankSum=8.709;DP=701;FS=0.409;HRun=0;HaplotypeScore=108.3901;InbreedingCoeff=0.4708;MQ=58.09;MQ0=8;MQRankSum=2.031;QD=11.83;ReadPosRankSum=4.603;VQSLOD=2.9200;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,1:50:55.11:0,55,1262	0/1:7,2:9:55.30:55,0,124	0/0:32,0:15:13.29:0,13,191	0/0:25,0:12:6.02:0,6,80	1/1:14,13:27:59.93:664,60,0	0/1:22,2:24:25.21:25,0,545	0/0:21,1:22:16:0,16,718	0/0:33,0:30:30.43:0,30,303	0/1:28,2:30:1.06:1,0,911	0/0:29,0:29:54.17:0,54,806	0/0:16,1:17:6.97:0,7,577	0/1:23,3:27:42.27:42,0,763	0/0:20,0:20:3.96:0,4,514	0/0:23,1:24:28.03:0,28,877	1/1:10,14:21:47.97:541,48,0	1/1:1,17:20:50.82:556,51,0	0/1:23,2:25:10.12:10,0,785	0/0:23,0:23:51.17:0,51,794	0/0:18,0:18:18.51:0,19,218	0/0:21,0:18:6.02:0,6,89	0/0:35,0:35:5.36:0,5,50	1/1:9,12:21:3.74:468,4,0	0/0:20,1:21:0.92:0,1,433	0/0:35,1:36:46.07:0,46,1144	0/0:19,1:20:12.99:0,13,671	1/1:11,13:24:41.96:471,42,0	0/0:25,0:23:37.41:0,37,334	1/1:5,8:13:24.07:281,24,0
chr10	103857478	.	TTGTGTG	T	1321.91	PASS	AB=0.825;AC=20;AF=0.385;AN=52;BaseQRankSum=6.017;DP=652;FS=2.284;HRun=0;HaplotypeScore=144.5674;InbreedingCoeff=0.7570;MQ=68.41;MQ0=9;MQRankSum=-2.694;QD=5.60;ReadPosRankSum=0.682;VQSLOD=2.7393;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:51:63.67:0,64,1617	0/0:10,0:12:18.06:0,18,419	./.	./.	1/1:17,7:24:20.90:219,21,0	0/0:21,0:20:24.08:0,24,565	0/0:23,0:25:29.24:0,29,713	0/1:26,0:26:0.07:0,0,0	0/0:17,0:17:27.09:0,27,640	0/0:29,0:30:39.13:0,39,775	0/0:14,0:14:24.08:0,24,575	0/0:25,0:25:32.20:0,32,605	0/0:22,0:22:33.36:0,33,680	0/0:4,0:11:3.01:0,3,78	1/1:18,6:25:17.95:226,18,0	1/1:7,9:16:15.05:303,15,0	0/0:21,0:25:39.13:0,39,985	0/0:22,0:21:36.12:0,36,974	1/1:21,0:27:4.28:44,4,0	1/1:12,0:23:11.06:120,11,0	0/0:28,0:39:2.92:0,3,17	1/1:12,11:22:11.07:136,11,0	0/0:13,0:13:8.69:0,9,139	0/0:20,0:34:39.13:0,39,955	1/1:6,0:15:4.43:9,4,0	1/1:13,9:22:24.19:271,24,0	1/1:14,0:21:9:126,9,0	0/1:6,7:12:30.88:55,0,31
chr10	103857921	.	AG	A	3440.38	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.657;DP=590;FS=4.995;HRun=1;HaplotypeScore=63.6412;InbreedingCoeff=0.9909;MQ=70.94;MQ0=0;MQRankSum=3.087;QD=32.77;ReadPosRankSum=-2.120;VQSLOD=2.6405;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.18:0,75,925	0/0:6,0:6:18.02:0,18,193	0/0:23,0:20:27.68:0,28,418	0/0:20,1:16:15.93:0,16,229	0/0:30,0:30:72.73:0,73,985	0/0:27,0:27:70.59:0,71,900	0/0:18,0:18:51.02:0,51,622	1/1:2,26:28:75.97:900,76,0	0/0:25,0:25:51.86:0,52,808	0/0:16,0:16:48.11:0,48,595	0/0:21,0:21:63.17:0,63,776	0/0:27,0:27:81.14:0,81,927	0/0:22,0:22:66.15:0,66,816	0/0:23,0:23:65.55:0,66,769	0/0:20,0:20:60.06:0,60,702	0/0:20,0:20:60.19:0,60,782	0/0:21,0:21:63.13:0,63,792	0/0:23,0:23:66.09:0,66,800	1/1:0,26:26:74.79:930,75,0	1/1:1,15:16:48:572,48,0	1/1:0,10:10:15.05:208,15,0	0/0:16,0:15:45.11:0,45,541	0/0:22,0:22:63.18:0,63,791	0/0:18,0:18:54.14:0,54,679	0/0:19,0:19:52.42:0,52,650	0/0:32,0:32:95.83:0,96,1151	1/1:1,24:25:61.09:830,61,0	0/0:10,0:10:27.07:0,27,356
chr10	103858127	.	TA	T	799.56	PASS	AB=0.827;AC=12;AF=0.214;AN=56;BaseQRankSum=3.963;DP=503;FS=1.696;HRun=14;HaplotypeScore=66.7834;InbreedingCoeff=0.5616;MQ=74.02;MQ0=0;MQRankSum=0.764;QD=6.66;ReadPosRankSum=1.960;VQSLOD=2.6858;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,3:36:9.35:0,9,445	0/1:6,2:8:11.29:11,0,60	0/0:29,0:21:27.79:0,28,245	0/1:14,1:15:7.04:7,0,42	0/0:25,1:26:12.78:0,13,330	0/0:16,0:16:31.22:0,31,262	0/0:20,0:20:35.80:0,36,300	0/0:21,1:22:9.78:0,10,214	0/0:17,1:18:9.16:0,9,202	0/0:19,0:19:26.37:0,26,222	0/0:18,0:18:11.14:0,11,202	0/0:18,0:18:36:0,36,318	0/0:10,0:10:9.01:0,9,84	0/0:15,0:15:24.83:0,25,203	1/1:8,13:22:22.62:259,23,0	1/1:9,10:21:33.66:215,34,0	0/0:22,0:22:34.98:0,35,414	0/0:12,0:12:23.92:0,24,201	0/0:19,0:20:44.78:0,45,380	0/1:13,0:13:1.18:1,0,121	0/0:16,0:16:26.98:0,27,235	1/1:6,10:16:35.64:244,36,0	0/0:20,0:20:32.98:0,33,287	0/0:18,0:18:38.95:0,39,340	0/0:9,0:12:23.68:0,24,189	0/1:8,13:21:13.90:184,0,14	0/0:14,0:15:32.81:0,33,277	1/1:1,2:3:5.94:41,6,0
chr10	103858168	.	AACACACACACAC	A	5079.08	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=9.512;DP=513;FS=0.556;HRun=0;HaplotypeScore=172.6526;InbreedingCoeff=0.9615;MQ=60.23;MQ0=12;MQRankSum=-9.979;QD=44.95;ReadPosRankSum=2.311;VQSLOD=4.2080;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:29:54.18:0,54,2338	0/0:6,0:6:15.05:0,15,834	./.	0/0:17,0:5:6.02:0,6,81	1/1:11,7:18:24.03:656,24,0	0/0:13,0:17:33.10:0,33,1427	0/0:15,0:15:27.09:0,27,1289	0/0:24,0:24:36.10:0,36,1296	0/0:10,0:14:27.09:0,27,1416	0/0:22,0:22:57.16:0,57,2430	0/0:14,0:14:27.09:0,27,1491	0/0:13,0:15:30.10:0,30,1609	0/0:10,0:11:27.09:0,27,1261	0/0:13,0:14:33.11:0,33,1588	1/1:8,8:20:39.12:1191,39,0	1/1:9,9:18:27.09:933,27,0	0/0:24,0:24:44.96:0,45,2241	0/0:11,0:12:30.10:0,30,1618	0/0:14,0:15:12.04:0,12,464	0/0:8,0:15:27.09:0,27,1393	0/0:30,0:30:33.11:0,33,1611	1/1:10,11:21:30.06:951,30,0	0/0:18,0:17:30.10:0,30,1617	0/0:28,0:31:72.25:0,72,3760	0/0:11,0:11:18.95:0,19,993	1/1:16,5:21:15.05:518,15,0	0/0:7,0:12:21.07:0,21,1084	1/1:6,8:14:24.08:830,24,0
chr10	103858211	.	A	ACA	111.17	PASS	AB=0.940;AC=6;AF=0.111;AN=54;BaseQRankSum=-0.461;DP=621;FS=7.869;HRun=0;HaplotypeScore=116.1625;InbreedingCoeff=0.0220;MQ=66.23;MQ0=14;MQRankSum=0.113;QD=0.83;ReadPosRankSum=-1.694;VQSLOD=1.4311;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:22.41:0,22,201	0/0:8,0:8:9:0,9,83	1/1:37,0:22:0.47:1,0,0	./.	0/0:22,0:22:17:0,17,82	0/0:16,0:16:20.50:0,20,163	0/1:24,0:24:26.67:27,0,115	0/0:28,0:28:1.80:0,2,23	0/0:29,0:29:20.68:0,21,178	0/0:21,0:21:20.42:0,20,189	0/0:13,0:13:21.05:0,21,221	0/0:20,0:20:26.74:0,27,256	0/0:12,0:12:17.88:0,18,176	0/0:17,0:17:17.70:0,18,158	0/0:19,0:19:34.09:0,34,167	0/0:26,0:25:25.57:0,26,126	0/0:30,0:30:18.38:0,18,313	0/0:16,0:15:23.89:0,24,241	0/0:14,0:14:2.84:0,3,14	0/1:14,0:14:17.48:137,0,17	0/1:30,10:44:21.94:22,0,102	0/0:19,0:19:23.81:0,24,114	0/0:15,0:15:24.03:0,24,247	0/0:38,0:38:56.65:0,57,562	0/0:14,0:14:12.03:0,12,130	0/0:15,0:15:14.20:0,14,70	0/1:15,0:15:32.50:32,0,86	0/0:14,0:14:22.73:0,23,112
chr10	103858755	.	TCA	T	177.11	PASS	AB=0.903;AC=6;AF=0.107;AN=56;BaseQRankSum=6.488;DP=1041;FS=14.638;HRun=0;HaplotypeScore=131.9815;InbreedingCoeff=0.5123;MQ=49.01;MQ0=45;MQRankSum=-5.890;QD=1.19;ReadPosRankSum=-0.693;VQSLOD=1.6452;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,1:48:53.31:0,53,1491	0/0:19,0:19:27.09:0,27,425	0/0:39,0:6:11.71:0,12,137	0/0:74,0:10:21.04:0,21,290	0/0:29,0:28:71.69:0,72,1073	0/0:24,0:24:57.18:0,57,902	0/0:53,1:53:99:0,135,2091	0/1:42,2:28:47.47:47,0,226	0/0:40,0:37:86.95:0,87,1348	0/0:40,0:38:87.24:0,87,1370	0/0:21,0:20:33.11:0,33,534	0/0:41,0:40:99:0,102,1625	0/0:42,0:42:99:0,102,1605	0/0:28,0:28:60.19:0,60,949	0/0:49,0:49:99:0,116,1772	0/0:34,0:34:72.11:0,72,1167	0/0:32,0:32:69.80:0,70,1279	0/0:22,0:22:54.66:0,55,886	0/1:14,3:9:34.79:62,0,35	0/0:13,1:13:2.84:0,3,14	1/1:72,3:59:5.98:50,6,0	0/0:34,0:32:63.12:0,63,995	0/0:20,0:20:37.68:0,38,587	0/0:87,1:85:99:0,202,3108	0/0:30,0:30:67.50:0,68,1038	0/0:60,1:58:63.67:0,64,1826	1/1:6,7:13:11.50:141,11,0	0/0:9,0:9:18.64:0,19,347
chr10	103858779	.	TCTCA	T	82.49	PASS	AB=0.957;AC=4;AF=0.071;AN=56;BaseQRankSum=5.867;DP=980;FS=2.895;HRun=0;HaplotypeScore=163.2093;InbreedingCoeff=0.2596;MQ=49.06;MQ0=54;MQRankSum=-2.514;QD=1.16;ReadPosRankSum=-2.370;VQSLOD=2.5093;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:47:99:0,103,2320	0/0:15,0:15:7.40:0,7,622	0/0:36,0:2:6.02:0,6,127	0/0:62,0:6:11.57:0,12,83	0/0:28,0:26:70.19:0,70,1563	0/0:22,0:22:60.62:0,61,1321	0/0:61,0:60:99:0,165,3710	0/1:38,4:30:99:152,0,328	0/0:43,0:41:97.76:0,98,2596	0/0:36,0:33:64.27:0,64,1954	0/0:16,0:16:39.13:0,39,979	0/0:49,0:47:99:0,135,3174	0/0:26,0:26:65.78:0,66,1498	0/0:31,0:31:81.72:0,82,1956	0/0:44,0:44:93.28:0,93,2217	0/0:32,1:33:75.02:0,75,1646	0/0:37,0:37:99:0,105,2337	0/1:22,0:22:4:4,0,925	0/0:21,0:12:15.61:0,16,126	1/1:7,0:7:3.01:20,3,0	0/0:62,0:44:2.96:0,3,19	0/0:23,0:21:54.15:0,54,1255	0/0:21,0:21:25.11:0,25,967	0/0:94,0:92:99:0,237,5528	0/0:29,0:28:50.97:0,51,1476	0/0:51,0:49:97.93:0,98,2802	0/0:9,0:9:14.14:0,14,70	0/0:9,0:9:13.79:0,14,490
chr10	103858819	.	T	TCTCA	679.58	PASS	AB=0.816;AC=6;AF=0.111;AN=54;BaseQRankSum=4.755;DP=958;FS=50.954;HRun=0;HaplotypeScore=167.6142;InbreedingCoeff=0.4539;MQ=49.31;MQ0=49;MQRankSum=-7.933;QD=9.71;ReadPosRankSum=-3.286;VQSLOD=0.8066;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:86.93:0,87,1435	0/0:10,0:10:22.05:0,22,333	0/0:25,0:1:3.01:0,3,52	0/0:48,0:1:3:0,3,26	0/0:22,0:20:46.39:0,46,769	0/0:23,0:20:35.86:0,36,589	0/0:55,0:52:99:0,111,1753	1/1:31,0:20:26.97:336,27,0	0/0:42,0:42:96.16:0,96,1575	0/0:34,0:31:75.24:0,75,1239	0/0:16,0:16:42.13:0,42,702	0/0:56,0:55:99:0,141,2152	0/0:34,0:34:82.47:0,82,1322	0/0:37,0:37:85.30:0,85,1367	0/0:49,0:47:98.60:0,99,1642	0/0:38,0:37:77.84:0,78,1260	0/0:38,0:36:91.79:0,92,1435	0/0:32,0:31:83.09:0,83,1331	0/1:16,1:12:26.63:105,0,27	1/1:4,6:9:2.85:16,3,0	./.	0/0:27,0:25:63.22:0,63,1088	0/0:23,0:23:60.16:0,60,967	0/0:90,0:89:99:0,216,3515	0/0:30,0:29:78.06:0,78,1099	0/0:39,0:37:81.96:0,82,1294	0/1:6,5:11:66.80:346,0,67	0/0:12,0:11:12.14:0,12,355
chr10	103858831	.	ACACACT	A	126.26	PASS	AB=0.950;AC=6;AF=0.111;AN=54;BaseQRankSum=6.175;DP=979;FS=9.061;HRun=0;HaplotypeScore=196.0869;InbreedingCoeff=0.1682;MQ=49.80;MQ0=57;MQRankSum=-6.422;QD=1.16;ReadPosRankSum=-2.946;VQSLOD=1.4347;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:94.17:0,94,2716	0/0:12,0:12:13.34:0,13,655	0/0:26,0:1:3.01:0,3,33	./.	0/0:25,0:22:51.14:0,51,1384	0/0:23,0:20:42.02:0,42,1173	0/0:56,0:53:99:0,131,3266	0/1:19,0:10:50.68:84,0,51	0/0:44,0:43:99:0,102,2994	0/0:51,0:41:99:0,107,2847	0/0:17,0:16:42.10:0,42,1238	0/0:56,0:55:99:0,132,4005	0/0:37,0:36:99:0,101,2919	0/0:43,0:42:99:0,106,3192	0/0:49,0:47:99:0,113,3143	0/0:41,0:40:95.70:0,96,2642	0/0:41,0:39:50.22:0,50,2616	0/0:34,0:33:73.23:0,73,2451	0/1:9,1:5:42.35:50,0,42	1/1:10,0:9:0.15:1,0,0	0/1:56,2:43:0.03:0,0,0	0/0:29,0:27:74.45:0,74,2143	0/0:26,0:25:59.95:0,60,1873	0/0:91,0:90:99:0,231,6741	0/0:39,0:38:84.23:0,84,2183	0/0:38,0:32:68.26:0,68,2255	0/1:11,1:12:90.24:90,0,138	0/0:14,0:13:26.89:0,27,672
chr10	103858849	.	T	TCA	84.62	PASS	AB=0.845;AC=6;AF=0.107;AN=56;BaseQRankSum=5.406;DP=955;FS=5.267;HRun=0;HaplotypeScore=131.2935;InbreedingCoeff=0.3939;MQ=50.18;MQ0=72;MQRankSum=-4.755;QD=0.90;ReadPosRankSum=-1.090;VQSLOD=2.2529;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:38:75.29:0,75,1117	0/0:14,0:14:23.08:0,23,261	0/0:27,0:1:2.99:0,3,23	0/0:41,0:2:2.60:0,3,10	0/0:22,0:20:31.34:0,31,389	0/0:25,0:23:38.71:0,39,492	0/0:47,0:43:86.37:0,86,1177	0/1:5,1:3:16.61:45,0,17	0/0:48,0:46:98.05:0,98,1199	0/0:57,0:40:69.39:0,69,1125	0/0:16,0:15:36.10:0,36,439	0/0:51,0:51:99:0,120,1502	0/0:40,0:39:98.63:0,99,1189	0/0:44,0:42:99:0,101,1259	0/0:45,0:43:99:0,99,1228	0/0:40,0:38:87.22:0,87,1065	0/0:38,0:36:80.66:0,81,955	0/0:33,0:32:1.49:0,1,792	1/1:9,1:4:5.69:55,6,0	0/1:10,1:9:0:0,0,0	0/1:40,13:43:0.01:0,0,0	0/0:39,0:37:77.40:0,77,919	0/0:28,0:27:56.81:0,57,696	0/0:92,0:91:99:0,213,2649	0/0:28,0:28:18.09:0,18,753	0/0:35,0:28:63.04:0,63,743	0/1:9,3:12:6.48:88,0,6	0/0:8,0:9:14.88:0,15,195
chr10	103858875	.	TCA	T	76.59	PASS	AB=0.800;AC=5;AF=0.096;AN=52;BaseQRankSum=6.133;DP=941;FS=19.644;HRun=0;HaplotypeScore=131.1052;InbreedingCoeff=0.6152;MQ=49.94;MQ0=79;MQRankSum=-5.370;QD=1.13;ReadPosRankSum=-3.376;VQSLOD=0.2966;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:39:88.39:0,88,1440	0/0:16,0:15:28.10:0,28,435	0/0:30,0:1:3.01:0,3,39	./.	0/0:25,0:21:30.02:0,30,419	0/0:24,0:23:54.17:0,54,872	0/0:51,0:46:99:0,102,1701	./.	0/0:45,0:42:99:0,102,1649	0/0:54,0:36:93.36:0,93,1470	0/0:14,0:13:30.08:0,30,445	0/0:48,0:47:99:0,111,1749	0/0:43,0:41:99:0,111,1699	0/0:43,0:41:87.38:0,87,1585	0/0:42,0:41:82.55:0,83,1359	0/0:44,0:42:84.26:0,84,1351	0/0:30,0:27:58.41:0,58,900	0/0:40,1:41:64.94:0,65,1519	1/1:13,1:4:5.91:55,6,0	0/0:6,4:8:0.42:0,0,1	1/1:33,8:34:2.73:38,3,0	0/0:42,0:41:89.47:0,89,1469	0/0:27,0:24:48.79:0,49,698	0/0:79,0:78:99:0,181,2879	0/0:24,0:24:54.18:0,54,868	0/0:47,0:36:95.31:0,95,1407	0/1:9,3:11:5.60:89,0,6	0/0:16,0:15:38.25:0,38,605
chr10	103858899	.	T	TCA	47.03	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=3.667;DP=910;FS=5.436;HRun=0;HaplotypeScore=140.2573;InbreedingCoeff=0.7371;MQ=50.12;MQ0=77;MQRankSum=-2.695;QD=1.05;ReadPosRankSum=-0.584;VQSLOD=2.2023;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:35:80.99:0,81,1031	0/0:13,0:12:18.38:0,18,280	./.	./.	0/0:24,0:21:27.09:0,27,345	0/0:18,0:18:44.35:0,44,542	0/0:55,0:49:99:0,105,1319	1/1:11,0:1:3:25,3,0	0/0:41,0:39:96.28:0,96,1200	0/0:54,0:41:96.47:0,96,1071	0/0:13,0:12:24.05:0,24,282	0/0:54,0:53:76.29:0,76,1283	0/0:54,0:52:99:0,126,1543	0/0:44,0:43:99:0,105,1292	0/0:46,0:46:99:0,108,1290	0/0:41,0:40:83.82:0,84,1032	0/0:26,0:25:69.18:0,69,850	0/0:38,0:38:89.17:0,89,1142	0/0:9,0:3:3.01:0,3,38	0/0:4,4:5:1.25:0,1,3	1/1:24,2:18:3.01:51,3,0	0/0:41,0:41:78.44:0,78,950	0/0:24,0:21:40.38:0,40,464	0/0:68,0:66:99:0,153,1911	0/0:20,0:20:35.41:0,35,393	0/0:49,0:39:99:0,99,1207	1/1:7,1:7:8.97:82,9,0	0/0:19,0:17:39.12:0,39,495
chr10	103859059	.	ACT	A	93.34	PASS	AB=0.650;AC=4;AF=0.071;AN=56;BaseQRankSum=6.484;DP=860;FS=36.733;HRun=0;HaplotypeScore=113.2812;InbreedingCoeff=0.2733;MQ=49.44;MQ0=63;MQRankSum=-2.057;QD=3.22;ReadPosRankSum=-3.235;VQSLOD=0.1019;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:32:72.20:0,72,1328	0/0:16,0:13:33.04:0,33,597	0/0:32,0:4:6.84:0,7,97	0/0:52,0:4:10.27:0,10,136	0/0:27,0:26:75.02:0,75,1261	0/0:21,0:21:45.16:0,45,937	0/0:51,0:37:96.29:0,96,1769	0/0:8,0:1:2.98:0,3,21	0/0:49,0:48:99:0,134,2301	0/0:47,0:28:67.22:0,67,1443	0/0:15,0:13:39.13:0,39,747	0/0:49,0:45:99:0,125,2266	0/0:29,0:26:70.48:0,70,1302	0/0:46,0:44:90.93:0,91,2069	0/0:33,0:30:66.13:0,66,1164	0/0:28,0:26:68.62:0,69,1150	0/0:31,0:31:87.22:0,87,1541	0/0:48,0:45:99:0,99,2124	0/1:3,2:4:17.36:35,0,17	0/1:5,12:15:31.70:75,0,32	0/0:17,5:20:7.61:0,8,37	0/0:30,0:26:34.04:0,34,1052	0/0:16,0:16:48.15:0,48,874	0/0:71,0:71:99:0,171,3055	0/0:32,0:27:59.81:0,60,1229	0/0:35,0:25:71.91:0,72,1147	1/1:4,3:6:4.26:87,4,0	0/0:6,0:5:15.03:0,15,255
chr10	103859061	.	T	TCA	151.11	PASS	AB=0.864;AC=5;AF=0.089;AN=56;BaseQRankSum=4.476;DP=869;FS=7.138;HRun=0;HaplotypeScore=117.7644;InbreedingCoeff=0.5745;MQ=49.63;MQ0=64;MQRankSum=-1.107;QD=3.15;ReadPosRankSum=-2.478;VQSLOD=1.4222;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:34:68.90:0,69,873	0/0:16,0:13:30.08:0,30,365	0/0:30,0:4:2.60:0,3,20	0/0:52,0:4:10.27:0,10,110	0/0:27,0:26:63.07:0,63,788	0/0:22,0:22:48.09:0,48,588	0/0:50,0:38:93.24:0,93,1144	0/0:8,0:2:2.98:0,3,21	0/0:49,0:48:99:0,120,1496	0/0:46,0:28:75.13:0,75,946	0/0:16,0:14:39.13:0,39,505	0/0:48,1:45:99:0,117,1473	0/0:31,0:27:70.46:0,70,885	0/0:47,0:45:99:0,113,1386	0/0:34,0:31:62.77:0,63,772	0/0:29,0:27:54.09:0,54,700	0/0:30,0:30:81.21:0,81,1029	0/0:46,0:44:99:0,105,1341	1/1:5,1:5:7.51:73,8,0	0/1:16,3:17:27.33:40,0,27	1/1:19,4:19:9.03:153,9,0	0/0:30,0:26:56.73:0,57,757	0/0:17,0:17:42.14:0,42,543	0/0:71,0:71:99:0,154,1962	0/0:32,0:27:66.18:0,66,837	0/0:36,0:26:53.69:0,54,622	0/0:6,1:6:10.17:0,10,37	0/0:6,0:5:12.92:0,13,158
chr10	103859071	.	TCA	T	160.64	PASS	AB=0.673;AC=3;AF=0.056;AN=54;BaseQRankSum=5.353;DP=863;FS=29.323;HRun=0;HaplotypeScore=112.4893;InbreedingCoeff=-0.0733;MQ=50.40;MQ0=72;MQRankSum=-4.536;QD=4.46;ReadPosRankSum=-1.621;VQSLOD=1.1773;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:34:75.23:0,75,1254	0/0:18,0:16:39.12:0,39,602	./.	0/0:52,0:4:3.01:0,3,44	0/0:27,0:25:60.14:0,60,887	0/0:18,0:18:44.91:0,45,757	0/0:51,0:43:99:0,108,1766	0/0:4,0:2:3.01:0,3,33	0/0:49,0:49:99:0,123,1973	0/0:41,0:30:81.25:0,81,1269	0/0:18,0:16:42.14:0,42,696	0/0:47,0:45:99:0,116,1888	0/0:31,0:27:74.74:0,75,1212	0/0:50,0:48:99:0,108,1699	0/0:34,0:32:75.21:0,75,1213	0/0:26,0:25:54.17:0,54,883	0/0:32,0:32:86.87:0,87,1345	0/0:43,1:41:68.72:0,69,1512	0/1:7,3:7:55.90:93,0,56	0/1:7,12:18:37.51:66,0,38	0/0:21,4:20:11.77:0,12,185	0/0:31,0:29:65.73:0,66,1032	0/0:17,0:17:39.11:0,39,603	0/0:67,0:67:99:0,116,2359	0/0:32,0:27:63.14:0,63,918	0/0:33,0:26:69.16:0,69,1029	0/1:3,4:6:28.44:101,0,28	0/0:9,0:8:21.07:0,21,334
chr10	103859109	.	TCTCACTCACACA	T	919.09	PASS	AB=0.933;AC=5;AF=0.089;AN=56;BaseQRankSum=7.236;DP=905;FS=41.616;HRun=0;HaplotypeScore=260.0097;InbreedingCoeff=-0.0924;MQ=54.04;MQ0=51;MQRankSum=-6.908;QD=9.38;ReadPosRankSum=-0.407;VQSLOD=1.3782;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:43:99:0,111,4225	0/0:14,0:14:39.13:0,39,1391	0/1:39,0:7:3.05:3,0,261	0/0:77,0:19:19.92:0,20,395	0/0:24,0:22:63.05:0,63,2253	0/0:21,0:21:51.16:0,51,2347	0/0:53,0:47:99:0,126,4871	0/1:10,10:16:80.79:582,0,81	0/0:51,0:51:99:0,141,5767	0/0:33,0:28:84.28:0,84,3386	0/0:20,0:19:57.07:0,57,2119	0/0:48,0:46:99:0,123,4889	0/0:48,0:44:99:0,126,4260	0/0:48,0:47:99:0,126,5386	0/0:39,0:39:93.58:0,94,4244	0/0:26,0:27:66.13:0,66,2757	0/0:35,0:35:99:0,105,4388	0/0:29,0:28:75.19:0,75,2803	0/1:16,0:12:39.76:262,0,40	0/1:17,0:17:45.67:46,0,79	0/0:25,0:20:12.04:0,12,249	0/0:21,0:20:50.94:0,51,2329	0/0:21,0:21:60.16:0,60,2258	0/0:53,0:53:99:0,126,4936	0/0:19,0:16:39.11:0,39,1556	0/0:43,0:38:99:0,108,4693	0/1:6,0:6:78.93:138,0,79	0/0:11,0:11:33.07:0,33,1130
chr10	103859113	.	ACT	A	373.31	PASS	AB=0.744;AC=4;AF=0.071;AN=56;BaseQRankSum=7.505;DP=906;FS=38.190;HRun=0;HaplotypeScore=115.7617;InbreedingCoeff=-0.0763;MQ=54.36;MQ0=44;MQRankSum=-6.974;QD=6.91;ReadPosRankSum=-0.118;VQSLOD=1.5057;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:44:99:0,114,2134	0/0:13,0:13:39.13:0,39,716	0/0:40,0:7:9.68:0,10,195	0/0:78,0:20:18.66:0,19,384	0/0:26,0:24:69.54:0,70,1228	0/0:22,0:22:54.14:0,54,964	0/0:54,0:49:99:0,132,2453	0/1:18,0:16:98.90:209,0,99	0/0:52,0:52:99:0,144,2579	0/0:35,0:32:96.32:0,96,1781	0/0:21,0:20:60.08:0,60,1027	0/0:46,0:44:99:0,126,2224	0/0:47,0:44:99:0,129,2251	0/0:45,0:45:99:0,129,2310	0/0:39,0:39:93.61:0,94,1935	0/0:28,0:28:72.21:0,72,1292	0/0:35,0:35:99:0,104,1909	0/0:31,0:30:84.23:0,84,1474	0/1:9,5:11:67.45:165,0,67	0/1:7,9:16:22.02:22,0,35	0/0:17,7:19:11.70:0,12,104	0/0:20,0:19:54.13:0,54,1027	0/0:24,0:24:69.15:0,69,1196	0/0:52,1:53:99:0,132,2338	0/0:16,0:15:42.12:0,42,718	0/0:42,0:37:99:0,108,2017	0/1:2,4:6:20.98:87,0,21	0/0:13,0:13:39.07:0,39,618
chr10	103859127	.	ACACACT	A	634.84	PASS	AB=0.719;AC=5;AF=0.089;AN=56;BaseQRankSum=8.240;DP=896;FS=35.566;HRun=0;HaplotypeScore=182.0038;InbreedingCoeff=-0.0983;MQ=56.29;MQ0=25;MQRankSum=-5.718;QD=8.82;ReadPosRankSum=-0.980;VQSLOD=0.7829;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:52:99:0,129,3803	0/0:14,0:14:39.11:0,39,1222	0/0:39,0:10:19.30:0,19,540	0/0:71,0:24:23.50:0,24,994	0/0:25,0:24:66.17:0,66,1931	0/0:26,0:26:50.65:0,51,1929	0/0:53,0:52:99:0,141,4214	0/1:18,0:16:99:174,0,247	0/0:54,0:54:99:0,153,4601	0/0:34,0:34:99:0,99,2930	0/0:20,0:20:57.17:0,57,1947	0/0:48,0:48:99:0,135,3951	0/0:38,0:38:99:0,114,3677	0/0:44,0:43:99:0,123,4044	0/0:39,0:39:99:0,117,3449	0/0:29,0:29:78.20:0,78,2539	0/0:39,0:39:99:0,117,3444	0/0:28,0:28:84.24:0,84,2509	0/1:2,5:7:64.94:289,0,65	0/1:6,9:15:68.52:89,0,69	0/1:19,7:23:29.69:30,0,183	0/0:20,0:20:56.97:0,57,1732	0/0:24,0:24:69.22:0,69,2317	0/0:56,0:56:99:0,132,3823	0/0:18,0:18:51.14:0,51,1514	0/0:41,0:40:99:0,117,3654	0/1:2,4:6:38.15:171,0,38	0/0:11,0:11:30.10:0,30,1058
chr10	103859196	.	T	TACACAC	706.05	PASS	AB=0.975;AC=21;AF=0.404;AN=52;BaseQRankSum=1.468;DP=919;FS=3.602;HRun=0;HaplotypeScore=217.9405;InbreedingCoeff=0.2706;MQ=52.25;MQ0=22;MQRankSum=-1.359;QD=1.65;ReadPosRankSum=-6.234;VQSLOD=1.0425;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:56,0:59:5.82:6,0,690	0/0:15,0:15:9.92:0,10,164	./.	./.	1/1:10,14:24:0.38:0,0,0	0/0:24,0:26:25.35:0,25,414	0/0:39,0:41:0.93:0,1,508	0/1:29,0:23:17.48:56,0,17	0/0:37,0:37:28:0,28,837	0/1:37,0:36:99:115,0,345	0/0:20,0:20:21.07:0,21,374	0/1:29,0:30:5.76:6,0,415	0/0:34,0:36:18.58:0,19,521	0/0:34,0:33:25.09:0,25,649	1/1:15,13:29:3.01:38,3,0	1/1:14,14:29:3.01:97,3,0	0/0:50,0:51:26.09:0,26,1082	0/1:31,0:31:34.25:34,0,547	0/1:19,0:18:3.49:3,0,98	0/1:21,0:20:29.49:29,0,133	1/1:44,0:44:3.27:60,3,0	1/1:15,0:33:8.86:101,9,0	0/0:24,0:25:33.09:0,33,560	0/0:56,0:57:76.53:0,77,1227	0/0:32,0:33:18.72:0,19,634	1/1:18,0:25:24.04:247,24,0	0/0:5,0:16:9.22:0,9,88	1/1:5,0:5:3.01:71,3,0
chr10	103859552	.	C	CAGAA	5320.49	PASS	AB=0.843;AC=36;AF=0.667;AN=54;BaseQRankSum=1.609;DP=556;FS=16.693;HRun=0;HaplotypeScore=107.9356;InbreedingCoeff=0.6006;MQ=59.10;MQ0=2;MQRankSum=-2.704;QD=13.07;ReadPosRankSum=-1.151;VQSLOD=3.1273;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,21:40:27.91:584,28,0	0/0:15,0:15:27.02:0,27,368	0/1:16,0:6:0:0,0,0	./.	1/1:26,0:25:1.85:231,2,0	1/1:9,12:24:15.05:353,15,0	0/0:18,0:18:10.53:0,11,289	1/1:28,0:27:8.78:53,9,0	0/0:15,0:15:18.05:0,18,258	0/0:22,0:22:36.09:0,36,467	0/0:17,0:17:18.03:0,18,230	1/1:10,5:15:15.05:350,15,0	0/1:9,8:18:34.54:200,0,35	1/1:6,4:10:12.04:272,12,0	1/1:19,0:19:15.05:285,15,0	1/1:10,0:10:6.02:114,6,0	0/0:27,0:27:15.30:0,15,497	0/1:11,7:19:34.60:148,0,35	1/1:23,0:23:20.96:268,21,0	1/1:19,0:19:30.04:468,30,0	1/1:9,0:9:3:25,3,0	1/1:15,0:15:11.91:151,12,0	1/1:19,14:33:24.51:501,25,0	1/1:11,14:26:17.80:408,18,0	0/0:22,0:24:32.81:0,33,415	0/1:26,0:26:16.70:273,0,17	1/1:25,0:25:30.05:521,30,0	1/1:6,0:6:6.02:114,6,0
chr10	103859569	.	A	AG	715.60	PASS	AB=0.878;AC=6;AF=0.107;AN=56;BaseQRankSum=6.420;DP=521;FS=1.898;HRun=1;HaplotypeScore=93.9964;InbreedingCoeff=0.1203;MQ=56.76;MQ0=4;MQRankSum=-4.433;QD=6.39;ReadPosRankSum=-0.331;VQSLOD=0.4306;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:36.75:0,37,563	0/0:17,0:17:51.17:0,51,660	0/1:10,0:2:0:0,0,0	0/0:11,0:5:6.82:0,7,93	0/0:26,0:25:52.41:0,52,589	0/0:20,0:20:18.27:0,18,172	0/0:17,1:18:18.96:0,19,626	0/1:25,0:23:75.65:113,0,76	0/0:14,0:14:39.11:0,39,492	0/0:21,0:21:60.19:0,60,769	0/0:10,0:10:21.06:0,21,259	0/0:13,0:14:25.26:0,25,257	0/0:18,0:18:30.81:0,31,342	0/0:8,0:8:8.06:0,8,78	0/0:15,0:15:19.13:0,19,115	0/0:9,0:9:14.35:0,14,113	0/0:26,0:26:78.25:0,78,1017	0/0:20,0:20:35.53:0,36,395	0/1:17,4:20:52.28:90,0,52	0/1:11,8:19:12.33:195,0,12	0/1:11,0:11:13.15:78,0,13	0/0:14,0:14:35.11:0,35,386	0/0:28,0:28:58.99:0,59,619	0/0:24,0:24:32.90:0,33,293	0/0:22,0:22:60.05:0,60,743	0/0:25,0:25:74.39:0,74,844	0/1:16,9:26:1.97:357,0,2	0/0:9,0:9:8.28:0,8,60
chr10	103859571	.	A	AAGG	1249.42	PASS	AB=0.984;AC=16;AF=0.286;AN=56;BaseQRankSum=13.420;DP=522;FS=0.413;HRun=0;HaplotypeScore=108.2297;InbreedingCoeff=0.2418;MQ=56.79;MQ0=4;MQRankSum=-2.302;QD=5.92;ReadPosRankSum=5.980;VQSLOD=2.0348;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:19.88:0,20,685	0/0:17,0:17:51.17:0,51,893	0/0:10,0:2:0:0,0,0	0/1:11,0:5:0.52:1,0,39	0/0:26,0:25:42.88:0,43,664	0/1:20,0:20:1.58:2,0,185	0/0:20,0:20:59.83:0,60,954	1/1:24,0:22:4.27:103,4,0	0/0:14,0:14:42.12:0,42,682	0/0:21,0:21:60.20:0,60,1022	0/0:9,0:9:21.07:0,21,345	0/1:14,0:14:12.35:12,0,259	0/0:19,0:19:19.21:0,19,444	0/1:8,0:8:8.77:9,0,66	0/1:15,0:15:6.63:7,0,62	0/1:8,0:8:1.01:1,0,47	0/0:28,0:28:78.27:0,78,1370	0/0:19,0:19:25.23:0,25,434	0/1:17,3:20:25.08:238,0,25	1/1:11,8:19:30.59:422,31,0	0/1:11,0:11:20.40:20,0,32	0/0:14,0:14:25.27:0,25,425	0/0:28,0:28:29.38:0,29,631	0/1:24,0:24:0.02:0,0,327	0/0:22,0:22:57.17:0,57,922	0/0:26,0:26:66.53:0,67,1006	1/1:16,9:26:52.63:583,53,0	0/1:10,0:10:0.26:0,0,47
chr10	103859591	.	A	AAAGAAAGG	4224.87	PASS	AB=0.964;AC=23;AF=0.411;AN=56;BaseQRankSum=3.376;DP=543;FS=9.524;HRun=0;HaplotypeScore=141.6363;InbreedingCoeff=0.0081;MQ=58.03;MQ0=4;MQRankSum=-1.794;QD=11.64;ReadPosRankSum=1.604;VQSLOD=3.4107;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:40:99:137,0,254	0/0:15,0:15:41.97:0,42,752	0/0:13,0:7:15.01:0,15,160	0/0:9,0:6:11.99:0,12,109	1/1:3,21:26:28.41:431,28,0	0/1:17,0:17:9.14:81,0,9	0/0:17,0:17:25.59:0,26,642	0/0:24,0:23:4.49:0,4,288	0/0:10,0:10:30.04:0,30,550	0/0:24,0:24:66.15:0,66,1049	0/0:14,0:14:33.05:0,33,505	0/1:12,0:12:66.81:67,0,100	0/1:24,0:24:14.47:14,0,320	0/1:14,0:14:49.94:50,0,168	1/1:1,19:24:15.52:659,16,0	1/1:0,9:9:6.02:263,6,0	0/0:31,0:31:54.48:0,54,1208	0/1:18,0:18:20.91:21,0,251	0/1:24,0:23:84.19:84,0,293	0/1:17,0:17:90.55:133,0,91	0/1:11,0:11:43.89:44,0,55	1/1:0,12:15:38.31:461,38,0	0/1:22,0:22:99:138,0,104	0/1:26,0:26:97.47:97,0,275	0/0:23,0:23:63.06:0,63,1003	0/1:3,21:27:7.09:1126,0,7	0/1:19,0:19:99:154,0,124	1/1:0,15:17:6.02:264,6,0
chr10	103859908	.	CTG	C	263.42	PASS	AB=0.899;AC=20;AF=0.400;AN=50;BaseQRankSum=3.977;DP=523;FS=14.630;HRun=0;HaplotypeScore=77.0764;InbreedingCoeff=-0.0335;MQ=63.56;MQ0=15;MQRankSum=1.159;QD=0.96;ReadPosRankSum=0.396;VQSLOD=0.1749;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:40:9.47:0,9,136	1/1:9,3:12:2.91:33,3,0	./.	./.	0/0:12,0:12:9:0,9,93	0/0:17,0:17:14:0,14,201	0/1:15,4:19:20.65:21,0,79	./.	0/1:9,1:11:28.72:29,0,161	0/0:18,0:18:15.05:0,15,222	0/1:12,1:13:23.65:24,0,37	0/0:12,0:12:15.03:0,15,189	0/1:10,2:10:53.23:53,0,57	0/1:17,1:18:14.61:15,0,162	0/0:18,0:18:6.02:0,6,82	0/1:10,0:10:0:0,0,0	0/1:32,2:34:58.01:58,0,332	0/0:26,0:27:4.63:0,5,318	1/1:21,0:21:2.80:13,3,0	1/1:11,0:15:2.84:14,3,0	1/1:40,0:39:2.22:7,2,0	0/0:13,0:15:2.03:0,2,25	0/1:14,2:16:23.91:24,0,60	0/1:31,3:34:83.71:84,0,237	0/1:8,2:10:20.61:21,0,101	0/0:13,0:11:17.95:0,18,172	1/1:4,0:8:2.84:14,3,0	0/0:12,0:11:10.36:0,10,98
chr10	103860248	.	AACAG	A	5029.80	PASS	AB=0.525;AC=10;AF=0.179;AN=56;BaseQRankSum=12.089;DP=629;FS=2.454;HRun=0;HaplotypeScore=108.0229;InbreedingCoeff=0.7991;MQ=96.51;MQ0=0;MQRankSum=-4.237;QD=45.73;ReadPosRankSum=1.770;VQSLOD=5.4566;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,3887	0/0:11,0:11:30.09:0,30,754	0/0:34,0:34:84.01:0,84,2036	0/0:31,0:31:74.80:0,75,1794	1/1:2,20:22:48.16:891,48,0	0/0:13,0:13:39.12:0,39,995	0/0:30,0:30:87.30:0,87,2318	0/0:28,0:28:75.24:0,75,1888	0/0:32,0:32:93.32:0,93,2503	0/0:17,0:17:51.17:0,51,1323	0/0:7,0:7:18.06:0,18,485	0/0:23,0:23:66.21:0,66,1725	0/0:18,0:18:54.19:0,54,1457	0/0:18,0:18:51.16:0,51,1320	1/1:1,26:27:72.25:1367,72,0	0/1:2,15:17:39.15:698,0,39	0/0:41,0:41:99:0,114,3076	0/0:15,0:15:42.14:0,42,1109	0/0:15,0:15:42.14:0,42,1127	0/0:21,0:21:57.20:0,57,1516	0/0:35,0:35:99:0,99,2522	1/1:1,9:10:21.07:391,21,0	0/0:19,0:19:54.19:0,54,1431	0/0:27,0:27:75.26:0,75,2016	0/0:14,0:14:42.14:0,42,1126	0/1:2,26:28:2.76:1341,0,3	0/0:20,0:20:60.21:0,60,1607	1/1:0,6:6:18.06:342,18,0
chr10	103860481	.	A	AG	4482.61	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.763;DP=560;FS=11.712;HRun=3;HaplotypeScore=53.6241;InbreedingCoeff=0.9851;MQ=92.53;MQ0=1;MQRankSum=-2.433;QD=38.31;ReadPosRankSum=-1.597;VQSLOD=3.7261;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.23:0,75,900	0/0:7,0:7:21.06:0,21,251	0/0:27,0:27:66.19:0,66,782	0/0:19,0:19:51.13:0,51,584	0/0:19,0:19:51.16:0,51,612	0/0:14,0:14:42.13:0,42,504	0/0:34,0:34:99:0,99,1188	1/1:0,27:27:81.24:1099,81,0	0/0:21,0:21:57.16:0,57,673	0/0:19,0:19:57.17:0,57,684	0/0:8,0:8:24.07:0,24,288	0/0:28,0:28:84.26:0,84,1008	0/0:21,0:21:63.19:0,63,756	0/0:12,0:12:36.10:0,36,421	0/0:23,0:23:66.20:0,66,792	0/0:16,0:16:39.10:0,39,456	0/0:32,0:32:93.29:0,93,1115	0/0:27,0:27:78.20:0,78,911	1/1:1,16:17:45.14:615,45,0	1/1:1,12:13:33.11:460,33,0	1/1:1,40:40:99:1512,108,0	0/0:19,0:19:57.17:0,57,684	0/0:14,0:14:42.13:0,42,504	0/0:23,0:23:69.21:0,69,827	0/0:14,0:14:42.13:0,42,504	0/0:16,0:16:45.13:0,45,526	1/1:1,18:18:57.19:796,57,0	0/0:3,0:3:9.03:0,9,108
chr10	103863249	.	GAC	G	1189.94	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=6.735;DP=734;FS=9.084;HRun=0;HaplotypeScore=109.9200;InbreedingCoeff=0.7797;MQ=52.52;MQ0=26;MQRankSum=0.638;QD=8.88;ReadPosRankSum=-0.604;VQSLOD=2.7113;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:47:86.57:0,87,1328	0/0:9,0:9:21.07:0,21,333	./.	0/0:13,0:1:0:0,0,0	1/1:4,14:16:6.01:76,6,0	0/0:25,0:24:50.82:0,51,683	0/0:40,0:40:92.84:0,93,1384	0/0:31,0:26:20.71:0,21,139	0/0:25,0:24:48.44:0,48,739	0/0:43,0:39:98.51:0,99,1359	0/0:13,0:12:21.07:0,21,329	0/0:23,0:23:53.20:0,53,747	0/0:26,0:25:62.55:0,63,916	0/0:21,0:21:37.64:0,38,502	1/1:3,15:18:16.30:207,16,0	1/1:3,20:22:13.90:229,14,0	0/0:34,0:32:64.04:0,64,1196	0/0:35,0:35:74.12:0,74,1278	0/0:13,0:17:11.63:0,12,117	0/1:18,0:19:4.93:5,0,187	0/0:69,0:67:18.10:0,18,133	1/1:3,14:17:8.76:123,9,0	0/0:19,0:18:41.93:0,42,633	0/0:63,0:62:99:0,130,2120	0/0:20,0:19:46:0,46,703	1/1:6,24:28:24.42:643,24,0	0/0:16,0:16:0.34:0,0,218	1/1:2,6:7:6.02:74,6,0
chr10	103865429	.	T	TCCC	3658.70	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-0.935;DP=704;FS=11.092;HRun=7;HaplotypeScore=101.6477;InbreedingCoeff=0.9976;MQ=85.88;MQ0=0;MQRankSum=-4.797;QD=34.52;ReadPosRankSum=-4.438;VQSLOD=0.6812;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,117,1562	0/0:15,0:15:39.10:0,39,516	0/0:26,0:26:66.20:0,66,884	0/0:24,0:23:51.04:0,51,653	0/0:27,0:27:78.24:0,78,1048	0/0:24,0:24:66.20:0,66,884	0/0:20,0:20:60.20:0,60,819	1/1:9,12:23:39.13:768,39,0	0/0:27,0:27:72.21:0,72,965	0/0:31,0:31:90.28:0,90,1215	0/0:22,0:22:63.18:0,63,843	0/0:25,0:25:66.20:0,66,885	0/0:17,0:17:45.11:0,45,596	0/0:22,0:22:63.19:0,63,828	0/0:20,0:20:57.18:0,57,777	0/0:30,0:30:84.27:0,84,1146	0/0:34,0:34:93.30:0,93,1266	0/0:41,0:41:99:0,102,1390	1/1:11,9:20:24.08:495,24,0	1/1:6,15:23:45.09:849,45,0	1/1:2,11:14:18.06:368,18,0	0/0:30,0:30:81.27:0,81,1105	0/0:23,0:23:57.16:0,57,778	0/0:15,0:15:45.15:0,45,612	0/0:24,0:24:69.22:0,69,940	0/0:41,0:41:99:0,102,1375	1/1:7,17:26:57.20:1179,57,0	0/0:13,0:13:39.13:0,39,531
chr10	103865958	.	G	GAA	2721.84	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=7.135;DP=746;FS=10.317;HRun=11;HaplotypeScore=105.7566;InbreedingCoeff=0.8259;MQ=75.68;MQ0=0;MQRankSum=1.011;QD=21.43;ReadPosRankSum=-5.158;VQSLOD=0.7655;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:70:99:0,122,1274	0/0:15,0:17:44.49:0,44,402	0/0:22,0:23:12.81:0,13,228	0/1:13,0:12:11.78:12,0,61	0/0:23,0:24:47.65:0,48,441	0/0:16,0:16:36.03:0,36,349	0/0:30,2:33:19.19:0,19,506	1/1:9,22:35:74.50:886,75,0	0/0:22,0:23:44.68:0,45,418	0/0:22,0:23:53.73:0,54,503	0/0:27,0:27:66.03:0,66,635	0/0:21,0:22:56.77:0,57,535	0/0:29,0:30:68.35:0,68,632	0/0:20,0:23:44.94:0,45,478	0/0:20,0:20:38.93:0,39,378	0/0:25,0:28:47.91:0,48,565	0/0:43,0:45:99:0,114,1047	0/0:28,0:31:35.32:0,35,591	1/1:5,11:20:50.06:568,50,0	1/1:3,16:21:17.91:482,18,0	1/1:4,11:19:43.60:532,44,0	0/0:29,0:30:27.59:0,28,442	0/0:29,0:31:62.49:0,62,643	0/0:36,0:36:66.82:0,67,812	0/0:20,0:21:53.78:0,54,501	0/0:25,0:27:50.33:0,50,451	1/1:3,15:19:6.55:414,7,0	0/0:17,0:18:2.56:0,3,196
chr10	103866211	.	C	CACAGTAAAG	11273.52	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.290;DP=684;FS=2.433;HRun=0;HaplotypeScore=190.8301;InbreedingCoeff=0.9998;MQ=83.20;MQ0=0;MQRankSum=-14.045;QD=108.40;ReadPosRankSum=-4.663;VQSLOD=4.0553;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,150,4507	0/0:10,0:10:30.10:0,30,927	0/0:23,0:23:66.19:0,66,1778	0/0:27,0:27:77.23:0,77,2051	0/0:22,0:22:56.78:0,57,1709	0/0:13,0:13:36.10:0,36,1117	0/0:26,0:26:69.24:0,69,2073	1/1:22,5:31:90.28:3700,90,0	0/0:43,0:43:99:0,126,3820	0/0:33,0:33:93.31:0,93,2769	0/0:19,0:19:57.18:0,57,1672	0/0:26,0:26:75.24:0,75,2209	0/0:21,0:21:63.22:0,63,1949	0/0:31,0:31:93.32:0,93,2855	0/0:30,0:30:81.26:0,81,2377	0/0:16,0:16:48.16:0,48,1483	0/0:30,0:30:87.25:0,87,2533	0/0:27,0:27:81.28:0,81,2514	1/1:12,4:17:48.14:1841,48,0	1/1:6,12:20:48.16:2180,48,0	1/1:9,8:19:42.14:1689,42,0	0/0:21,0:21:63.22:0,63,1911	0/0:20,0:20:57.17:0,57,1697	0/0:26,0:26:78.25:0,78,2272	0/0:14,0:14:42.12:0,42,1210	0/0:32,0:32:96.32:0,96,2841	1/1:10,6:17:45.02:1863,45,0	0/0:18,0:18:54.13:0,54,1468
chr10	103869454	.	AG	A	464.42	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.146;DP=160;FS=3.347;HRun=3;HaplotypeScore=17.8546;InbreedingCoeff=0.6349;MQ=70.65;MQ0=5;MQRankSum=-0.571;QD=18.58;ReadPosRankSum=-0.309;VQSLOD=2.8158;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:45.05:0,45,552	0/0:3,0:3:6.02:0,6,83	0/0:17,0:7:9.08:0,9,231	0/0:11,0:7:15:0,15,180	0/0:7,0:6:18.04:0,18,236	0/0:8,0:8:24.08:0,24,335	0/0:14,0:14:36.09:0,36,483	1/1:0,5:5:15.05:185,15,0	0/0:7,0:7:15.05:0,15,211	0/0:5,0:5:12.02:0,12,135	0/0:2,0:2:6.02:0,6,84	0/0:6,0:6:18.03:0,18,235	0/0:2,0:2:6.02:0,6,83	0/0:5,0:5:15.04:0,15,191	0/0:7,0:7:21.07:0,21,291	0/0:2,0:2:6.02:0,6,86	0/0:6,0:6:8.93:0,9,122	0/0:2,0:1:3.01:0,3,41	1/1:1,4:4:12.02:135,12,0	1/1:1,1:2:3.01:31,3,0	1/1:2,7:9:15.05:185,15,0	0/0:2,0:1:3.01:0,3,43	0/0:1,0:1:3.01:0,3,41	0/0:6,0:6:18.06:0,18,252	0/0:2,0:2:6.02:0,6,84	0/0:4,0:4:12.04:0,12,169	1/1:3,1:4:6.02:78,6,0	0/0:1,0:1:3.01:0,3,43
chr10	103869501	.	AAGAG	A	415.92	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=4.315;DP=185;FS=6.641;HRun=0;HaplotypeScore=36.6906;InbreedingCoeff=0.6791;MQ=70.08;MQ0=5;MQRankSum=-3.007;QD=31.99;ReadPosRankSum=-2.096;VQSLOD=1.4100;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.69:0,73,1741	0/0:4,0:4:12.04:0,12,306	0/0:21,0:12:28.43:0,28,696	0/0:24,0:14:17.88:0,18,684	0/0:4,0:4:12.04:0,12,286	0/0:5,0:5:15.05:0,15,350	0/0:6,0:6:18.06:0,18,437	1/1:1,3:3:9.03:157,9,0	0/0:6,0:6:18.06:0,18,459	0/0:10,0:10:30.10:0,30,735	0/0:3,0:3:9.03:0,9,228	0/0:4,0:4:3.01:0,3,77	0/0:2,0:2:6.02:0,6,153	0/0:4,0:4:12.04:0,12,296	0/0:4,0:4:12.04:0,12,306	0/0:5,0:5:15.05:0,15,381	0/0:5,0:5:15:0,15,325	0/0:4,0:4:12.04:0,12,272	1/1:0,8:8:24:329,24,0	./.	0/0:2,2:4:0:0,0,0	0/0:6,0:6:15.05:0,15,379	0/0:7,0:6:18.06:0,18,460	0/0:3,0:3:9.03:0,9,201	0/0:3,0:3:9.03:0,9,204	0/0:6,0:6:18.06:0,18,402	1/1:0,1:1:3.01:53,3,0	0/0:7,0:7:21.07:0,21,506
chr10	103869611	.	C	CTGT	3684.43	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.288;DP=476;FS=8.301;HRun=0;HaplotypeScore=71.5402;InbreedingCoeff=0.9853;MQ=84.70;MQ0=0;MQRankSum=-5.627;QD=48.48;ReadPosRankSum=-2.062;VQSLOD=4.4485;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1849	0/0:9,0:9:27.08:0,27,405	0/0:19,0:19:45.15:0,45,688	0/0:27,0:26:54.01:0,54,967	0/0:16,0:16:45.15:0,45,709	0/0:13,0:13:33.11:0,33,523	0/0:18,0:18:54.17:0,54,823	1/1:7,9:18:36.07:626,36,0	0/0:14,0:14:33.10:0,33,496	0/0:19,0:19:51.17:0,51,800	0/0:19,0:19:51.17:0,51,805	0/0:12,0:12:36.12:0,36,569	0/0:19,0:19:57.17:0,57,856	0/0:18,0:18:45.13:0,45,668	0/0:19,0:19:57.18:0,57,877	0/0:15,0:15:39.12:0,39,588	0/0:26,0:26:78.24:0,78,1210	0/0:16,0:16:45.13:0,45,689	1/1:2,9:11:27.09:573,27,0	1/1:1,14:15:45.15:979,45,0	1/1:3,14:18:39.13:852,39,0	0/0:13,0:13:36.12:0,36,571	0/0:16,0:16:45.12:0,45,661	0/0:16,0:16:45.15:0,45,714	0/0:8,0:8:24.08:0,24,380	0/0:23,0:23:57.19:0,57,903	1/1:1,13:14:30.10:655,30,0	0/0:5,0:5:9.03:0,9,143
chr10	103870188	.	T	TAGG	3206.88	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.748;DP=617;FS=3.683;HRun=0;HaplotypeScore=101.3068;InbreedingCoeff=0.9916;MQ=88.65;MQ0=0;MQRankSum=-12.032;QD=45.17;ReadPosRankSum=0.118;VQSLOD=4.9466;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,166,3015	0/0:5,0:5:15.05:0,15,280	0/0:22,0:22:60.21:0,60,1106	0/0:25,0:25:69.24:0,69,1250	0/0:23,0:23:60.16:0,60,1076	0/0:28,0:28:84.29:0,84,1566	0/0:35,0:35:90.31:0,90,1672	1/1:0,18:18:54.19:994,54,0	0/0:33,0:33:99:0,99,1814	0/0:25,0:25:72.25:0,72,1343	0/0:24,0:24:72.24:0,72,1313	0/0:21,0:21:63.22:0,63,1175	0/0:25,0:25:75.24:0,75,1360	0/0:24,0:24:72.22:0,72,1281	0/0:28,0:28:81.26:0,81,1473	0/0:22,0:22:63.19:0,63,1108	0/0:24,0:24:69.21:0,69,1285	0/0:17,0:17:51.17:0,51,941	1/1:1,3:5:15.05:264,15,0	1/1:1,19:19:48.16:810,48,0	1/1:0,10:10:21.07:355,21,0	0/0:22,0:22:60.21:0,60,1118	0/0:17,0:17:51.17:0,51,945	0/0:24,0:24:72.25:0,72,1328	0/0:15,0:15:42.14:0,42,783	0/0:21,0:21:60.19:0,60,1081	1/1:3,15:18:54.18:957,54,0	0/0:11,0:11:33.11:0,33,597
chr10	103870189	.	TC	T	914.89	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.814;DP=621;FS=3.756;HRun=2;HaplotypeScore=84.5868;InbreedingCoeff=0.9901;MQ=89.00;MQ0=0;MQRankSum=-11.964;QD=12.36;ReadPosRankSum=0.815;VQSLOD=2.4349;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,163,2419	0/0:5,0:5:15.05:0,15,225	0/0:23,0:23:66.21:0,66,954	0/0:25,0:25:72.09:0,72,968	0/0:23,0:23:60.19:0,60,878	0/0:28,0:28:84.27:0,84,1239	0/0:35,0:35:99:0,105,1482	1/1:0,18:18:53.46:367,53,0	0/0:32,0:32:93.31:0,93,1392	0/0:25,0:25:75.21:0,75,1098	0/0:24,0:24:69.23:0,69,1033	0/0:21,0:21:63.20:0,63,925	0/0:25,0:25:72.21:0,72,1036	0/0:24,0:24:72.24:0,72,1075	0/0:28,0:28:81.27:0,81,1194	0/0:22,0:22:63.20:0,63,923	0/0:25,0:25:72.18:0,72,1030	0/0:17,0:17:51.17:0,51,763	1/1:2,3:5:13.35:80,13,0	1/1:1,19:19:45.79:249,46,0	1/1:2,10:12:22.82:126,23,0	0/0:22,0:22:60.20:0,60,897	0/0:18,0:18:51.17:0,51,762	0/0:24,0:24:72.23:0,72,1055	0/0:15,0:15:42.14:0,42,630	0/0:20,0:20:57.18:0,57,836	1/1:4,15:19:44.01:267,44,0	0/0:11,0:11:30.10:0,30,448
chr10	103870504	.	A	ATC	229.18	PASS	AB=1.000;AC=22;AF=0.647;AN=34;BaseQRankSum=-1.193;DP=428;FS=4.693;HRun=0;HaplotypeScore=70.2000;InbreedingCoeff=0.4654;MQ=81.54;MQ0=23;MQRankSum=-2.247;QD=1.09;ReadPosRankSum=-0.083;VQSLOD=1.0499;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:25:6.01:68,6,0	./.	./.	0/0:52,0:26:1.85:0,2,7	./.	0/1:12,0:12:0:0,0,0	0/1:18,0:16:0.04:0,0,0	1/1:35,0:32:4.19:21,4,0	./.	1/1:10,0:10:0.47:1,0,0	./.	0/1:9,0:8:0:0,0,0	0/1:11,0:11:0:1,0,0	0/0:13,0:13:2.99:0,3,23	./.	0/0:11,0:12:14.23:0,14,72	1/1:9,6:17:6.01:70,6,0	1/1:8,0:8:6.14:35,6,0	1/1:25,0:25:6:54,6,0	./.	1/1:17,0:16:3:26,3,0	./.	./.	0/0:11,0:16:8.52:0,9,42	./.	1/1:6,0:6:0.47:1,0,0	1/1:17,0:16:7.25:57,7,0	./.
chr10	103870713	.	CCT	C	51.37	PASS	AC=4;AF=0.133;AN=30;BaseQRankSum=3.172;DP=133;FS=0.000;HRun=0;HaplotypeScore=26.9018;InbreedingCoeff=0.5296;MQ=43.47;MQ0=22;MQRankSum=-3.150;QD=5.14;ReadPosRankSum=-1.515;VQSLOD=1.8749;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:7:18.06:0,18,365	./.	./.	0/0:7,0:1:3.01:0,3,60	./.	0/0:2,0:1:3.01:0,3,60	0/0:27,0:19:45.12:0,45,817	./.	0/0:7,0:4:9.03:0,9,182	./.	./.	0/0:7,0:6:18.06:0,18,365	0/0:3,0:3:9.03:0,9,183	0/0:4,0:4:12.04:0,12,242	0/0:4,0:4:12.04:0,12,243	./.	0/0:19,0:16:40.99:0,41,773	0/0:8,0:7:21.07:0,21,401	1/1:0,2:2:6.02:97,6,0	./.	1/1:5,3:5:3.01:44,3,0	0/0:3,0:1:3:0,3,27	./.	0/0:16,0:16:35.33:0,35,650	./.	./.	./.	./.
chr10	103870893	.	GA	G	283.53	PASS	AC=8;AF=0.167;AN=48;BaseQRankSum=3.625;DP=110;FS=1.145;HRun=1;HaplotypeScore=17.0558;InbreedingCoeff=0.6152;MQ=109.56;MQ0=1;MQRankSum=-0.775;QD=25.78;ReadPosRankSum=-0.721;VQSLOD=3.1225;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:36.06:0,36,483	./.	0/0:11,0:8:15.51:0,16,198	0/0:9,1:10:10.64:0,11,223	0/0:1,0:1:3.01:0,3,46	./.	0/0:6,0:6:18.04:0,18,251	1/1:0,3:3:9:92,9,0	0/0:3,0:3:9.03:0,9,138	0/0:1,0:1:3.01:0,3,46	0/0:1,0:1:3:0,3,25	0/0:7,0:7:17.75:0,18,272	0/0:4,0:4:9.03:0,9,120	0/0:5,0:5:15.05:0,15,213	0/0:8,0:8:24.05:0,24,310	0/0:4,0:4:12.04:0,12,169	0/0:7,0:7:21.07:0,21,321	0/0:2,0:2:6.02:0,6,92	1/1:0,4:4:12.04:155,12,0	./.	1/1:0,1:1:3.01:42,3,0	0/0:2,0:2:6.01:0,6,72	./.	0/0:8,0:8:24.05:0,24,322	0/0:2,0:2:6.01:0,6,71	0/0:2,0:2:6.01:0,6,73	1/1:0,3:3:9.03:126,9,0	0/0:3,0:3:9.03:0,9,135
chr10	103871294	.	CA	C	672.56	PASS	AB=0.782;AC=4;AF=0.071;AN=56;BaseQRankSum=6.100;DP=496;FS=9.338;HRun=1;HaplotypeScore=61.9593;InbreedingCoeff=-0.0860;MQ=99.66;MQ0=1;MQRankSum=-6.087;QD=10.19;ReadPosRankSum=-3.914;VQSLOD=-0.5558;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.22:0,75,1122	0/0:7,0:7:21.07:0,21,328	0/0:35,0:35:99:0,105,1563	0/0:33,0:31:67.06:0,67,1064	0/0:8,0:8:24.06:0,24,352	0/0:16,0:16:45.15:0,45,704	0/0:24,0:24:72.25:0,72,1125	0/1:9,11:20:99:359,0,313	0/0:18,0:18:54.17:0,54,822	0/0:10,0:10:27.09:0,27,420	0/0:11,0:11:33.06:0,33,468	0/0:18,0:18:54.17:0,54,822	0/0:25,0:25:75.24:0,75,1137	0/0:20,0:20:41.22:0,41,849	0/0:24,0:24:69.23:0,69,1069	0/0:12,0:12:36.12:0,36,563	0/0:17,0:17:48.12:0,48,714	0/0:14,0:14:42.10:0,42,630	0/1:18,3:21:99:180,0,475	0/1:11,1:12:11.89:12,0,360	0/0:21,2:21:0.48:0,0,479	0/0:14,0:14:42.14:0,42,647	0/0:8,0:8:21.07:0,21,324	0/0:26,0:26:75.24:0,75,1133	0/0:16,0:16:45.15:0,45,693	0/0:16,0:16:48.13:0,48,707	0/1:7,6:13:99:228,0,242	0/0:10,0:10:30.10:0,30,454
chr10	103871300	.	TG	T	254.04	PASS	AB=0.777;AC=3;AF=0.054;AN=56;BaseQRankSum=6.383;DP=484;FS=0.000;HRun=2;HaplotypeScore=62.1295;InbreedingCoeff=-0.0571;MQ=98.94;MQ0=2;MQRankSum=-4.522;QD=5.77;ReadPosRankSum=-2.966;VQSLOD=-0.4900;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.24:0,75,1103	0/0:7,0:7:21.07:0,21,315	0/0:39,0:36:93.28:0,93,1335	0/0:39,0:32:64.40:0,64,1086	0/0:8,0:8:24.08:0,24,360	0/0:16,0:16:45.15:0,45,674	0/0:19,0:19:57.19:0,57,853	0/1:10,6:16:99:187,0,292	0/0:17,0:17:51.17:0,51,764	0/0:10,0:10:30.10:0,30,449	0/0:12,0:12:36.12:0,36,538	0/0:17,0:17:48.16:0,48,716	0/0:23,0:23:69.23:0,69,1033	0/0:19,0:19:51.17:0,51,764	0/0:21,0:21:60.20:0,60,889	0/0:10,0:10:30.10:0,30,450	0/0:19,0:19:54.18:0,54,808	0/0:14,0:14:36.10:0,36,512	0/1:13,2:15:33.77:34,0,474	0/0:11,0:11:30.10:0,30,449	0/0:21,2:21:32.82:0,33,494	0/0:14,0:14:39.12:0,39,564	0/0:8,0:8:21.07:0,21,315	0/0:26,0:26:72.20:0,72,1052	0/0:18,0:18:51.17:0,51,763	0/0:15,0:15:42.13:0,42,608	0/1:8,5:13:99:134,0,236	0/0:9,0:9:27.09:0,27,404
chr10	103871328	.	AAC	A	669.46	PASS	AB=0.903;AC=22;AF=0.423;AN=52;BaseQRankSum=2.779;DP=565;FS=0.730;HRun=0;HaplotypeScore=83.2686;InbreedingCoeff=-0.1849;MQ=62.09;MQ0=13;MQRankSum=1.771;QD=2.02;ReadPosRankSum=0.794;VQSLOD=1.7761;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:28:31.20:31,0,325	0/1:6,2:8:26.23:26,0,37	./.	./.	1/1:7,6:13:5.42:64,5,0	0/0:11,0:16:3:0,3,26	0/1:26,0:26:47.92:48,0,193	0/0:14,0:13:8.92:0,9,61	0/1:15,1:16:17.83:18,0,123	0/1:10,2:12:20.21:20,0,120	0/1:18,0:18:36.63:37,0,151	0/1:18,4:22:23.46:23,0,65	0/1:19,0:19:12.22:12,0,157	0/1:16,0:16:22.32:22,0,44	1/1:16,4:21:11.86:111,12,0	0/1:4,6:10:4.01:56,0,4	0/1:33,1:34:99:117,0,330	0/1:14,5:19:5.19:5,0,283	0/0:16,0:18:21.63:0,22,162	0/0:18,0:19:2.74:0,3,27	0/0:28,0:29:17.89:0,18,182	0/0:15,0:18:8.04:0,8,93	0/1:11,0:12:8.12:8,0,39	0/1:30,2:32:59.64:60,0,184	0/0:15,0:15:6.02:0,6,85	1/1:13,1:14:6.07:65,6,0	0/0:10,0:12:6.45:0,6,63	1/1:6,4:10:11.24:103,11,0
chr10	103871462	.	C	CCA	5648.48	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.594;DP=609;FS=2.897;HRun=0;HaplotypeScore=78.1724;InbreedingCoeff=0.9994;MQ=90.97;MQ0=0;MQRankSum=-4.216;QD=50.89;ReadPosRankSum=-1.481;VQSLOD=4.9393;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.19:0,72,1013	0/0:14,0:14:42.09:0,42,575	0/0:26,0:26:66.01:0,66,939	0/0:28,0:28:75.25:0,75,1051	0/0:18,0:18:45.15:0,45,662	0/0:24,0:23:72.24:0,72,1059	0/0:21,0:21:51.17:0,51,750	1/1:5,18:21:60.16:1077,60,0	0/0:21,0:21:63.21:0,63,920	0/0:27,0:27:75.23:0,75,1081	0/0:8,0:8:24.08:0,24,353	0/0:21,0:21:60.20:0,60,884	0/0:25,0:25:72.23:0,72,1039	0/0:17,0:17:51.17:0,51,751	0/0:28,0:28:84.25:0,84,1197	0/0:20,0:20:57.14:0,57,796	0/0:39,0:39:99:0,111,1607	0/0:22,0:22:60.13:0,60,883	1/1:1,18:19:57.19:1048,57,0	1/1:2,15:17:45.15:842,45,0	1/1:0,29:29:75.26:1404,75,0	0/0:20,0:20:57.19:0,57,839	0/0:15,0:15:45.15:0,45,662	0/0:22,0:22:63.21:0,63,928	0/0:20,0:20:60.20:0,60,884	0/0:27,0:27:81.27:0,81,1193	1/1:2,21:23:69.24:1278,69,0	0/0:11,0:11:33.11:0,33,486
chr10	103871922	.	GT	G	5054.35	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.929;DP=730;FS=4.572;HRun=4;HaplotypeScore=69.8523;InbreedingCoeff=0.9992;MQ=84.47;MQ0=0;MQRankSum=-2.098;QD=32.61;ReadPosRankSum=-0.045;VQSLOD=5.3588;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1512	0/0:9,0:9:24.07:0,24,321	0/0:24,0:24:70.87:0,71,928	0/0:27,0:27:57.19:0,57,786	0/0:14,0:14:42.13:0,42,571	0/0:14,0:14:42.14:0,42,588	0/0:27,0:27:81.25:0,81,1115	1/1:1,28:29:84.24:996,84,0	0/0:29,0:29:87.29:0,87,1216	0/0:18,0:18:54.17:0,54,738	0/0:24,0:24:72.23:0,72,989	0/0:31,0:31:90.28:0,90,1242	0/0:39,0:39:99:0,114,1595	0/0:34,0:34:99:0,102,1394	0/0:32,0:32:93.28:0,93,1242	0/0:27,0:27:81.27:0,81,1134	0/0:41,0:41:99:0,123,1666	0/0:25,0:25:72.15:0,72,964	1/1:0,19:19:54.10:607,54,0	1/1:1,20:21:57.17:684,57,0	1/1:2,57:59:99:1980,166,0	0/0:20,0:20:60.19:0,60,824	0/0:12,0:12:33.11:0,33,462	0/0:28,0:28:84.28:0,84,1176	0/0:26,0:25:78.23:0,78,1058	0/0:29,0:29:87.27:0,87,1186	1/1:3,24:27:66.19:787,66,0	0/0:9,0:9:27.09:0,27,378
chr10	103876525	.	C	CA	3994.75	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.889;DP=692;FS=2.997;HRun=2;HaplotypeScore=66.4704;InbreedingCoeff=0.9785;MQ=90.99;MQ0=0;MQRankSum=-1.368;QD=38.41;ReadPosRankSum=1.229;VQSLOD=4.3713;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,172,2118	0/0:15,0:15:45.12:0,45,541	0/0:38,0:38:99:0,108,1317	0/0:19,0:18:42.12:0,42,495	1/1:0,16:16:45.15:648,45,0	0/0:28,0:28:84.23:0,84,1004	0/0:17,0:17:48.14:0,48,580	0/0:37,0:37:99:0,102,1224	0/0:18,0:18:51.14:0,51,616	0/0:22,0:22:63.20:0,63,778	0/0:15,0:15:42.13:0,42,520	0/0:31,0:31:87.25:0,87,1055	0/0:25,0:25:63.18:0,63,768	0/0:28,0:28:84.26:0,84,1041	1/1:0,28:28:75.25:1080,75,0	1/1:1,21:22:57.19:821,57,0	0/0:39,0:39:99:0,111,1362	0/0:25,0:25:72.21:0,72,877	0/0:27,0:27:78.24:0,78,954	0/0:33,0:33:99:0,99,1225	0/0:37,0:36:99:0,111,1362	1/1:0,18:18:48.16:691,48,0	0/0:14,0:14:42.12:0,42,507	0/0:23,0:23:69.22:0,69,855	0/0:16,0:16:48.15:0,48,595	1/1:2,16:18:48.14:669,48,0	0/0:22,0:21:60.08:0,60,695	1/1:0,2:2:6.02:86,6,0
chr10	103877193	.	TAAAAC	T	2697.58	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.939;DP=632;FS=0.000;HRun=0;HaplotypeScore=118.9681;InbreedingCoeff=0.9875;MQ=76.14;MQ0=3;MQRankSum=-0.904;QD=26.71;ReadPosRankSum=0.158;VQSLOD=3.4040;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:78.27:0,78,2066	0/0:12,0:12:24.08:0,24,686	0/0:37,0:28:40.55:0,41,1099	0/0:40,0:28:26.31:0,26,411	0/0:32,0:32:75.26:0,75,2026	0/0:25,0:25:51.18:0,51,1455	0/0:17,0:17:39.13:0,39,1064	1/1:13,8:20:24.03:366,24,0	0/0:15,0:15:45.15:0,45,1271	0/0:22,0:22:39.12:0,39,1056	0/0:21,0:21:45.15:0,45,1285	0/0:17,0:17:42.13:0,42,1138	0/0:15,0:15:36.12:0,36,980	0/0:17,0:17:45.15:0,45,1284	0/0:25,0:25:54.19:0,54,1482	0/0:16,0:16:42.14:0,42,1193	0/0:30,0:30:72.25:0,72,2052	0/0:28,0:28:54.17:0,54,1437	1/1:8,4:11:12.01:161,12,0	1/1:9,19:28:60.21:1116,60,0	1/1:6,16:22:39.13:725,39,0	0/0:15,0:15:36.11:0,36,961	0/0:21,0:21:42.14:0,42,1143	0/0:30,0:30:66.23:0,66,1873	0/0:25,0:25:72.25:0,72,2038	0/0:32,0:32:72.25:0,72,2024	1/1:5,13:18:27.09:502,27,0	0/0:5,0:5:15.05:0,15,429
chr10	103877339	.	GTGTGTGTGTGTGTGTGTGTGTA	G	1784.04	PASS	AB=0.653;AC=7;AF=0.125;AN=56;BaseQRankSum=6.491;DP=634;FS=13.033;HRun=0;HaplotypeScore=296.5121;InbreedingCoeff=0.6688;MQ=52.57;MQ0=22;MQRankSum=-1.737;QD=20.27;ReadPosRankSum=-2.638;VQSLOD=0.6349;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:81.28:0,81,6578	0/0:10,0:10:15.94:0,16,1089	0/0:17,0:3:4.83:0,5,159	0/0:21,0:7:4.26:0,4,157	0/0:20,0:17:20.89:0,21,1655	0/0:35,0:35:81.28:0,81,6231	0/0:20,0:20:33.10:0,33,2426	0/1:15,17:31:99:341,0,99	0/0:25,0:25:49.05:0,49,3407	0/0:12,0:11:27.09:0,27,1769	0/0:18,0:18:42.10:0,42,2597	0/0:19,0:18:39.13:0,39,2781	0/0:15,0:15:42.13:0,42,2823	0/0:14,0:14:26.12:0,26,1855	0/0:31,0:31:21.05:0,21,1063	0/0:17,0:16:24.08:0,24,1453	0/0:35,0:34:73.25:0,73,5553	0/0:31,0:31:75.24:0,75,4969	1/1:9,7:15:17.84:592,18,0	1/1:6,19:23:7.77:527,8,0	0/0:16,0:14:3.48:0,3,150	0/0:19,0:15:18.51:0,19,789	0/0:25,0:25:27.05:0,27,1522	0/0:42,0:42:61.09:0,61,3896	0/0:28,0:28:54.19:0,54,4190	0/0:28,0:28:72.19:0,72,4192	1/1:15,0:15:32.72:465,33,0	0/0:6,0:6:6.02:0,6,343
chr10	103878311	.	GTCTCTC	G	734.11	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=4.542;DP=430;FS=13.238;HRun=0;HaplotypeScore=87.1778;InbreedingCoeff=0.7245;MQ=77.99;MQ0=15;MQRankSum=-1.387;QD=7.06;ReadPosRankSum=-2.144;VQSLOD=0.3240;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:39.59:0,40,912	0/0:6,0:5:12.04:0,12,243	0/1:40,0:17:14.32:14,0,169	0/0:45,0:30:7.06:0,7,316	0/0:12,0:11:12:0,12,228	0/0:12,0:12:18.05:0,18,308	0/0:22,0:21:39.13:0,39,1177	1/1:13,5:17:15.05:301,15,0	0/0:6,0:6:12.04:0,12,296	0/0:14,0:13:18.05:0,18,418	0/0:12,0:12:6.02:0,6,163	0/0:13,0:13:21.02:0,21,461	0/0:8,0:8:12.04:0,12,312	0/0:11,0:11:24.05:0,24,546	0/0:12,0:12:21.07:0,21,612	0/0:15,0:15:27.08:0,27,672	0/0:17,0:17:45.15:0,45,1211	0/0:10,0:10:27.06:0,27,674	1/1:9,0:8:12.02:172,12,0	1/1:9,1:9:6.02:123,6,0	1/1:11,5:16:3.01:57,3,0	0/0:15,0:14:18.02:0,18,390	0/0:9,0:8:8.69:0,9,99	0/0:15,0:15:39.13:0,39,1141	0/0:15,0:15:24:0,24,430	0/0:12,0:12:27.09:0,27,645	1/1:5,6:11:12.04:225,12,0	0/0:13,0:9:21.07:0,21,426
chr10	103878326	.	TCTCTCTCTC	T	116.47	PASS	AB=0.958;AC=7;AF=0.125;AN=56;BaseQRankSum=5.612;DP=388;FS=8.144;HRun=0;HaplotypeScore=95.1950;InbreedingCoeff=0.0727;MQ=69.55;MQ0=17;MQRankSum=-0.698;QD=1.23;ReadPosRankSum=-0.532;VQSLOD=0.9763;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:51.58:0,52,1392	0/0:6,0:5:12.93:0,13,374	0/1:40,0:15:8.68:9,0,437	0/0:42,0:22:0.64:0,1,489	0/0:11,0:9:14.92:0,15,354	0/0:9,0:9:24.07:0,24,555	0/0:18,0:17:45.61:0,46,1720	0/1:8,0:7:18.40:35,0,18	0/0:4,0:4:12.04:0,12,410	0/0:11,0:9:18.06:0,18,573	0/0:9,0:9:9.02:0,9,253	0/0:8,0:8:21.07:0,21,697	0/0:7,0:6:15.04:0,15,455	0/0:10,0:10:24.55:0,25,789	0/0:10,0:10:21.07:0,21,842	0/0:11,0:11:27.09:0,27,1015	0/0:17,0:17:48.15:0,48,1763	0/0:11,0:11:30.10:0,30,1108	0/1:11,4:13:90.36:157,0,90	0/1:10,0:9:9.68:10,0,44	0/1:12,0:12:7.33:7,0,67	0/0:16,0:15:24:0,24,607	0/0:15,0:13:12.95:0,13,265	0/0:15,0:15:42.14:0,42,1720	0/0:12,0:12:24.08:0,24,617	0/0:13,0:13:30.10:0,30,921	1/1:10,0:9:3.24:16,3,0	0/0:13,0:9:21.07:0,21,641
chr10	103878696	.	G	GGA	727.29	PASS	AB=0.957;AC=17;AF=0.850;AN=20;BaseQRankSum=-0.465;DP=551;FS=0.000;HRun=0;HaplotypeScore=18.7911;InbreedingCoeff=0.1528;MQ=9.66;MQ0=394;MQRankSum=2.192;QD=4.02;ReadPosRankSum=-1.926;VQSLOD=1.2470;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	./.	1/1:26,2:6:9.03:151,9,0	./.	./.	1/1:31,2:6:6.02:102,6,0	1/1:20,2:2:3.01:51,3,0	./.	1/1:9,6:12:12.04:205,12,0	1/1:13,3:5:9.03:154,9,0	./.	./.	0/0:13,0:1:3.01:0,3,39	./.	./.	1/1:15,2:3:3.01:51,3,0	./.	1/1:22,1:2:1.25:3,1,0	./.	0/1:21,1:5:33.36:45,0,33	./.	1/1:2,1:1:3.01:51,3,0
chr10	103879248	.	GGA	G	1770.05	PASS	AB=0.614;AC=8;AF=0.143;AN=56;BaseQRankSum=7.577;DP=681;FS=5.259;HRun=0;HaplotypeScore=54.5968;InbreedingCoeff=0.6677;MQ=39.19;MQ0=150;MQRankSum=1.519;QD=22.13;ReadPosRankSum=-0.495;VQSLOD=3.4026;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:35:93.29:0,93,1530	0/0:16,0:10:27.01:0,27,428	0/0:17,0:1:3.01:0,3,51	0/0:23,0:1:3.01:0,3,51	0/0:16,0:13:39.13:0,39,660	0/0:22,0:16:36.11:0,36,590	0/0:23,0:10:30.09:0,30,477	0/1:5,11:12:15.34:342,0,15	0/0:31,0:24:54.12:0,54,886	0/0:43,0:26:78.25:0,78,1290	0/0:18,0:14:36.06:0,36,557	0/0:34,0:25:59.75:0,60,970	0/0:31,0:23:56.84:0,57,968	0/0:31,0:17:36.12:0,36,616	0/0:28,0:24:51.17:0,51,871	0/0:27,0:22:57.19:0,57,960	0/0:15,0:13:30.10:0,30,501	0/0:19,0:12:27.07:0,27,424	0/1:3,4:5:6.89:143,0,7	1/1:7,10:12:27.09:355,27,0	1/1:3,13:13:36.12:473,36,0	0/0:23,0:17:39.13:0,39,667	0/0:32,0:26:69.24:0,69,1179	0/0:33,0:22:48.06:0,48,760	0/0:30,0:22:60.18:0,60,976	0/0:26,0:15:45.15:0,45,771	1/1:4,20:19:48.11:611,48,0	0/0:13,0:10:24.06:0,24,384
chr10	103880315	.	CAT	C	8739.92	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=19.134;DP=707;FS=2.589;HRun=0;HaplotypeScore=140.5223;InbreedingCoeff=0.9956;MQ=81.54;MQ0=0;MQRankSum=-7.438;QD=33.88;ReadPosRankSum=3.464;VQSLOD=7.0481;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,144,2542	0/0:18,0:18:51.17:0,51,930	0/0:32,0:32:87.28:0,87,1511	0/0:23,0:22:63.74:0,64,1023	1/1:3,15:18:36.49:517,36,0	0/0:21,0:20:60.21:0,60,1100	0/0:34,0:34:99:0,99,1786	1/1:3,25:28:75.21:1018,75,0	0/0:28,0:28:81.28:0,81,1478	0/0:26,0:26:78.27:0,78,1402	0/0:21,0:21:60.21:0,60,1087	0/0:30,0:30:87.30:0,87,1587	0/0:22,0:22:63.22:0,63,1123	0/0:22,0:22:66.23:0,66,1200	1/1:2,25:27:72.24:1031,72,0	1/1:5,22:27:63.19:902,63,0	0/0:26,0:26:75.26:0,75,1368	0/0:15,0:15:45.15:0,45,824	1/1:4,19:22:57.18:796,57,0	1/1:0,19:19:57.11:790,57,0	1/1:7,27:34:54.18:773,54,0	1/1:1,22:23:42.14:601,42,0	0/0:23,0:23:69.24:0,69,1258	0/0:27,0:27:78.74:0,79,1413	0/0:29,0:29:84.29:0,84,1529	1/1:2,26:28:78.26:1117,78,0	1/1:2,24:26:72.24:1023,72,0	1/1:1,4:5:12.04:172,12,0
chr10	103880367	.	TAGAC	T	7139.50	PASS	AB=0.933;AC=23;AF=0.411;AN=56;BaseQRankSum=14.085;DP=748;FS=11.108;HRun=0;HaplotypeScore=160.0891;InbreedingCoeff=0.9234;MQ=66.50;MQ0=2;MQRankSum=-4.752;QD=25.59;ReadPosRankSum=0.328;VQSLOD=4.0321;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,126,2975	0/0:17,0:17:36.12:0,36,888	0/0:44,0:35:54.52:0,55,1017	0/0:30,0:24:38.80:0,39,856	1/1:4,19:23:27.41:397,27,0	0/0:18,0:18:36.10:0,36,808	0/0:36,0:36:81.28:0,81,1945	1/1:13,17:30:48.16:792,48,0	0/0:34,0:34:87.30:0,87,2068	0/0:23,0:23:48.15:0,48,1096	0/0:20,0:20:41.82:0,42,1035	0/0:24,0:24:63.20:0,63,1504	0/0:26,0:26:63.22:0,63,1525	0/0:31,0:31:63.22:0,63,1492	1/1:8,17:25:51.17:837,51,0	1/1:4,22:26:60.20:999,60,0	0/0:37,0:37:96.33:0,96,2313	0/1:26,2:28:15.26:15,0,1528	1/1:16,8:24:24.08:399,24,0	1/1:3,13:16:36.12:598,36,0	1/1:12,19:31:42.14:699,42,0	1/1:5,16:21:36.12:596,36,0	0/0:22,0:22:39.13:0,39,927	0/0:34,0:34:81.28:0,81,1970	0/0:20,0:20:39.13:0,39,925	1/1:11,18:29:60.20:960,60,0	1/1:10,12:22:39.13:648,39,0	1/1:0,4:4:12.04:200,12,0
chr10	103880461	.	A	AG	4437.04	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-13.783;DP=724;FS=8.314;HRun=5;HaplotypeScore=77.4829;InbreedingCoeff=0.9918;MQ=83.52;MQ0=0;MQRankSum=-2.370;QD=31.03;ReadPosRankSum=-0.431;VQSLOD=4.9818;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,147,1563	0/0:16,0:16:48.12:0,48,515	0/0:21,0:21:45.09:0,45,470	0/0:26,0:26:60.38:0,60,591	0/0:21,0:21:56.94:0,57,563	0/0:26,0:25:72.15:0,72,757	0/0:31,0:31:81.19:0,81,862	1/1:4,23:27:66.21:868,66,0	0/0:27,0:27:81.10:0,81,831	0/0:28,0:28:78.19:0,78,832	0/0:9,0:9:21.93:0,22,222	0/0:25,0:25:66.17:0,66,709	0/0:28,0:28:72.13:0,72,749	0/0:22,0:22:63.13:0,63,660	0/0:24,0:24:69.12:0,69,727	0/0:23,0:23:60.14:0,60,638	0/0:39,0:39:99:0,105,1101	0/0:33,0:33:81.20:0,81,869	1/1:4,19:23:27.90:695,28,0	1/1:4,10:14:36.12:472,36,0	1/1:2,46:48:99:1458,111,0	0/0:24,0:24:66.17:0,66,708	0/0:23,0:23:57.14:0,57,611	0/0:29,2:30:32.68:0,33,692	0/0:19,0:19:57.05:0,57,588	0/0:25,0:25:66.16:0,66,703	1/1:3,28:31:72.23:944,72,0	0/0:5,0:5:12.01:0,12,120
chr10	103880932	.	AT	A	2774.97	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=10.489;DP=669;FS=0.848;HRun=1;HaplotypeScore=87.9521;InbreedingCoeff=0.7710;MQ=86.30;MQ0=0;MQRankSum=-1.010;QD=18.50;ReadPosRankSum=-0.132;VQSLOD=3.7212;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,108,1628	0/0:6,0:6:18.06:0,18,287	0/0:23,0:23:66.12:0,66,976	0/0:21,0:21:57.14:0,57,801	1/1:2,15:17:48.13:548,48,0	0/0:18,0:18:53.74:0,54,777	0/0:27,0:27:81.26:0,81,1270	0/0:35,0:34:12.32:0,12,367	0/0:22,0:22:66.21:0,66,1026	0/0:23,0:23:66.21:0,66,1030	0/0:15,0:15:42.14:0,42,666	0/0:27,0:27:81.20:0,81,1219	0/0:22,0:22:66.21:0,66,1022	0/0:28,0:28:84.27:0,84,1316	1/1:2,24:26:69.21:806,69,0	0/1:33,0:33:19.13:24,0,19	0/0:26,0:26:75.22:0,75,1143	0/0:28,0:27:84.27:0,84,1308	0/1:24,0:24:25.83:26,0,178	0/0:12,0:12:8.20:0,8,158	0/0:34,0:34:32.10:0,32,396	1/1:1,18:19:48.10:550,48,0	0/0:22,1:23:66.23:0,66,1054	0/0:37,0:37:99:0,105,1623	0/0:23,0:23:63.19:0,63,958	1/1:0,20:20:60.18:693,60,0	0/0:28,0:28:78.50:0,78,447	1/1:1,10:11:27.08:310,27,0
chr10	103880933	.	TC	T	2772.05	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.346;DP=679;FS=4.595;HRun=4;HaplotypeScore=89.7454;InbreedingCoeff=0.9619;MQ=85.38;MQ0=0;MQRankSum=-2.554;QD=22.18;ReadPosRankSum=1.589;VQSLOD=2.6265;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,105,1415	0/0:6,0:6:18.06:0,18,252	0/0:22,0:22:60.17:0,60,812	0/0:21,0:21:53.97:0,54,629	1/1:16,1:17:48.14:558,48,0	0/0:20,0:20:51.14:0,51,677	0/0:27,0:27:78.26:0,78,1092	0/0:35,0:34:93.30:0,93,1257	0/0:22,0:22:63.20:0,63,856	0/0:23,0:23:69.21:0,69,935	0/0:16,0:16:45.13:0,45,597	0/0:28,0:28:81.26:0,81,1110	0/0:23,0:23:66.17:0,66,870	0/0:28,0:28:81.27:0,81,1133	1/1:26,0:26:69.20:806,69,0	1/1:1,32:33:2.99:36,3,0	0/0:26,0:26:69.23:0,69,965	0/0:28,0:27:81.27:0,81,1132	0/0:24,0:24:60.15:0,60,752	0/0:11,0:11:30.10:0,30,403	0/0:37,0:37:99:0,99,1282	1/1:18,0:18:48.10:542,48,0	0/0:26,0:26:66.22:0,66,923	0/0:38,0:38:99:0,99,1353	0/0:24,0:24:63.18:0,63,848	1/1:20,0:20:60.18:695,60,0	0/0:28,0:28:84.21:0,84,1124	1/1:11,0:11:27.08:316,27,0
chr10	103881028	.	AAC	A	333.25	PASS	AB=0.923;AC=15;AF=0.300;AN=50;BaseQRankSum=2.399;DP=590;FS=6.292;HRun=0;HaplotypeScore=79.5697;InbreedingCoeff=0.0334;MQ=63.15;MQ0=10;MQRankSum=1.314;QD=1.25;ReadPosRankSum=-0.911;VQSLOD=0.4925;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:34,1:35:28.78:29,0,196	0/1:11,2:14:46.84:47,0,113	./.	./.	0/0:16,0:18:17.99:0,18,219	0/1:16,0:17:2.10:2,0,101	0/1:22,2:24:50.21:50,0,84	0/0:26,0:25:5.93:0,6,40	0/0:16,0:17:20.27:0,20,252	0/0:25,0:25:8.79:0,9,208	0/0:15,0:15:15.03:0,15,188	0/0:17,0:17:18.02:0,18,208	0/1:19,3:22:17.48:17,0,134	0/0:22,0:21:13.15:0,13,287	0/0:19,0:21:11.62:0,12,223	0/1:24,1:25:18.25:18,0,358	0/1:29,0:27:65.98:66,0,197	0/1:20,5:25:25.94:26,0,316	./.	1/1:5,1:6:3.01:32,3,0	1/1:30,7:37:11.86:111,12,0	0/0:12,0:11:6.02:0,6,89	0/0:13,0:13:12.02:0,12,155	0/0:35,5:40:2.51:0,3,273	0/1:23,0:23:3.29:3,0,194	0/0:18,0:18:23.99:0,24,281	1/1:6,1:8:8.86:79,9,0	0/0:3,0:3:3.01:0,3,31
chr10	103881283	.	C	CCCTG	1763.71	PASS	AB=0.590;AC=20;AF=0.357;AN=56;BaseQRankSum=4.437;DP=487;FS=22.640;HRun=0;HaplotypeScore=112.0526;InbreedingCoeff=0.6432;MQ=80.60;MQ0=1;MQRankSum=-1.190;QD=11.60;ReadPosRankSum=-3.630;VQSLOD=0.5334;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:75:0,75,1011	0/0:7,0:7:14.84:0,15,192	0/0:18,0:16:39.12:0,39,575	0/0:23,0:22:51.05:0,51,687	1/1:2,0:8:3:30,3,0	0/0:19,0:19:44.99:0,45,576	0/0:23,0:23:60.15:0,60,926	1/1:8,0:17:9.29:195,9,0	0/0:26,0:26:60.05:0,60,860	0/0:15,0:15:33.06:0,33,495	0/0:10,0:10:17.89:0,18,261	0/0:14,0:14:33.07:0,33,478	0/0:17,0:17:38.90:0,39,478	0/0:28,0:28:71.86:0,72,1018	1/1:6,10:26:20.78:464,21,0	1/1:2,1:9:5.99:122,6,0	0/0:36,0:36:96:0,96,1324	0/0:19,0:19:39.01:0,39,505	1/1:9,0:9:1.68:152,2,0	1/1:8,0:9:5.22:46,5,0	1/1:6,0:18:3.01:40,3,0	1/1:7,0:19:3:60,3,0	0/0:13,0:13:24.08:0,24,367	0/0:23,0:23:54.07:0,54,768	0/0:15,0:15:39.76:0,40,549	0/1:6,0:26:43.29:686,0,43	0/1:3,0:8:20.93:73,0,21	1/1:1,2:3:3.01:76,3,0
chr10	103881493	.	C	CTGTG	727.64	PASS	AB=0.765;AC=21;AF=0.389;AN=54;BaseQRankSum=5.403;DP=613;FS=0.000;HRun=0;HaplotypeScore=118.7776;InbreedingCoeff=0.5460;MQ=63.80;MQ0=11;MQRankSum=-1.953;QD=3.06;ReadPosRankSum=-1.618;VQSLOD=2.0018;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:50:45.13:0,45,651	0/0:4,0:5:12.03:0,12,167	1/1:34,0:21:1.25:3,1,0	0/0:37,0:24:2.94:0,3,18	0/1:14,0:20:19.53:20,0,114	0/0:16,0:16:18.04:0,18,257	0/0:30,0:30:36.41:0,36,568	1/1:19,0:19:6.02:105,6,0	0/0:20,0:21:33.10:0,33,501	0/1:29,0:30:12.93:13,0,332	0/0:12,0:12:12.03:0,12,167	0/0:31,0:31:48.53:0,49,618	0/0:19,0:19:28.38:0,28,451	0/0:17,0:21:33.03:0,33,390	1/1:10,0:19:4.98:78,5,0	1/1:6,0:8:5.49:24,5,0	0/0:31,0:31:51.16:0,51,781	0/0:22,0:25:14:0,14,395	1/1:17,2:22:24:378,24,0	1/1:10,0:9:6.02:114,6,0	1/1:23,5:27:3.08:72,3,0	1/1:12,0:20:10.98:49,11,0	0/0:13,0:13:6.02:0,6,95	0/0:34,0:37:63.19:0,63,936	0/0:23,0:23:33.11:0,33,521	1/1:14,0:15:2.12:11,2,0	./.	0/1:2,0:9:33.36:35,0,33
chr10	103881729	.	T	TGCAAG	17566.09	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-14.079;DP=690;FS=7.652;HRun=0;HaplotypeScore=120.0772;InbreedingCoeff=0.9944;MQ=94.90;MQ0=1;MQRankSum=-7.606;QD=75.72;ReadPosRankSum=2.341;VQSLOD=6.7364;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,154,3153	0/0:10,0:10:30.10:0,30,617	0/0:36,0:36:96.26:0,96,1920	0/0:39,0:39:99:0,99,2040	1/1:6,18:24:60.21:1775,60,0	0/0:17,0:17:51.18:0,51,1058	0/0:31,0:31:93.31:0,93,1914	1/1:7,17:25:69.21:1919,69,0	0/0:19,0:19:54.18:0,54,1081	0/0:24,0:24:69.21:0,69,1372	0/0:16,0:16:45.14:0,45,907	0/0:20,0:20:60.21:0,60,1260	0/0:28,0:28:84.28:0,84,1722	0/0:23,0:23:66.21:0,66,1331	1/1:1,21:22:63.22:1899,63,0	1/1:4,18:22:60.21:1739,60,0	0/0:48,0:48:99:0,138,2807	0/0:22,0:22:63.20:0,63,1220	1/1:8,16:23:60.21:1757,60,0	1/1:1,9:11:27.09:766,27,0	1/1:7,18:25:54.18:1641,54,0	1/1:4,17:21:51.17:1523,51,0	0/0:17,0:17:51.18:0,51,1049	0/0:44,0:44:99:0,126,2616	0/0:13,0:13:39.13:0,39,819	1/1:2,23:25:12.26:2156,12,0	1/1:2,22:24:60.68:1832,61,0	1/1:0,8:8:18.06:558,18,0
chr10	103882024	.	T	TC	2476.44	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.561;DP=622;FS=10.211;HRun=0;HaplotypeScore=72.7479;InbreedingCoeff=0.9915;MQ=80.75;MQ0=5;MQRankSum=0.918;QD=24.28;ReadPosRankSum=-1.349;VQSLOD=3.8795;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,1861	0/0:10,0:10:27.08:0,27,362	0/0:72,0:48:11.70:0,12,965	0/0:50,0:23:47.11:0,47,644	0/0:25,0:25:75.21:0,75,1022	0/0:19,0:19:57.19:0,57,784	0/0:16,0:16:48.13:0,48,622	1/1:6,21:28:60.59:719,61,0	0/0:18,0:18:54.18:0,54,750	0/0:18,0:18:51.16:0,51,686	0/0:14,0:14:40.20:0,40,498	0/0:16,0:16:45.13:0,45,597	0/0:16,0:16:48.16:0,48,667	0/0:14,0:14:42.13:0,42,569	0/0:13,0:13:39.13:0,39,545	0/0:20,0:20:60.18:0,60,785	0/0:24,0:24:69.23:0,69,961	0/0:21,0:21:63.14:0,63,822	1/1:6,15:21:43.32:506,43,0	1/1:3,14:17:39.70:474,40,0	1/1:1,11:12:27.06:306,27,0	0/0:14,0:14:39.12:0,39,529	0/0:25,0:25:75.23:0,75,1005	0/0:9,0:9:27.08:0,27,361	0/0:14,0:14:42.14:0,42,579	0/0:19,0:19:57.18:0,57,766	1/1:0,24:24:54.15:647,54,0	0/0:25,0:25:72.24:0,72,999
chr10	103882607	.	CTG	C	177.32	PASS	AB=0.915;AC=12;AF=0.231;AN=52;BaseQRankSum=0.300;DP=716;FS=9.330;HRun=0;HaplotypeScore=95.9026;InbreedingCoeff=-0.1900;MQ=64.74;MQ0=21;MQRankSum=1.420;QD=0.62;ReadPosRankSum=2.442;VQSLOD=1.0628;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:43:43.39:43,0,288	0/1:8,2:10:26.40:26,0,37	./.	./.	0/0:13,0:13:5.99:0,6,52	0/1:10,5:15:26.38:26,0,38	0/0:23,0:31:14.99:0,15,145	0/0:27,0:24:10.87:0,11,62	0/1:20,5:25:11.47:11,0,160	0/0:24,0:24:6.86:0,7,129	0/0:15,0:14:5.83:0,6,66	0/0:25,0:23:18.28:0,18,471	0/1:17,0:17:7.90:8,0,230	0/1:21,0:20:0.67:1,0,227	0/1:21,0:21:0.29:0,0,1	0/1:26,0:34:0.01:0,0,0	0/0:34,0:34:1.70:0,2,499	0/1:22,2:24:46.55:47,0,251	0/0:29,0:29:24.03:0,24,241	0/1:13,0:13:12.02:13,0,12	0/0:76,0:73:65.58:0,66,868	0/0:21,0:21:2.99:0,3,24	0/1:8,6:14:26.40:26,0,38	0/1:45,2:48:99:101,0,466	0/0:13,0:13:23.03:0,23,277	0/0:28,0:28:37.94:0,38,266	0/0:10,0:10:9.02:0,9,105	0/0:11,0:11:10.78:0,11,58
chr10	103882652	.	TGA	T	1420.42	PASS	AB=0.992;AC=8;AF=0.143;AN=56;BaseQRankSum=-0.521;DP=701;FS=4.117;HRun=0;HaplotypeScore=97.6011;InbreedingCoeff=0.6219;MQ=57.74;MQ0=37;MQRankSum=0.997;QD=10.29;ReadPosRankSum=-0.951;VQSLOD=3.2198;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:72.31:0,72,802	0/0:10,0:10:9.77:0,10,117	0/0:55,0:20:46.31:0,46,486	0/0:47,0:16:31.92:0,32,310	0/0:14,0:14:32.99:0,33,313	0/0:16,0:16:15.38:0,15,247	0/0:18,0:17:30.02:0,30,334	1/1:22,6:27:56.52:489,57,0	0/0:21,0:20:35.79:0,36,432	0/0:23,0:23:63.03:0,63,669	0/0:10,0:9:20.99:0,21,205	0/0:36,0:34:84.94:0,85,984	0/0:18,0:18:32.42:0,32,544	0/0:20,0:20:46.47:0,46,503	0/0:21,0:21:17.70:0,18,154	0/0:33,0:32:39.25:0,39,324	0/0:37,0:36:81.61:0,82,1034	0/0:23,0:23:36.42:0,36,523	1/1:22,0:22:10.28:307,10,0	1/1:1,9:10:2.85:44,3,0	0/1:62,1:62:99:525,0,122	0/0:17,0:17:3.01:0,3,48	0/0:16,0:15:21.76:0,22,244	0/0:41,0:41:73.57:0,74,1026	0/0:17,0:16:42.07:0,42,560	0/0:25,0:25:57.09:0,57,692	0/1:15,0:15:4.62:196,0,5	0/0:11,0:11:16.40:0,16,130
chr10	103883146	.	GGGTGGA	G	1643.17	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.651;DP=318;FS=26.553;HRun=0;HaplotypeScore=70.5001;InbreedingCoeff=0.8915;MQ=77.59;MQ0=1;MQRankSum=-3.667;QD=27.39;ReadPosRankSum=-0.864;VQSLOD=1.3217;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:30.10:0,30,977	0/0:5,0:5:15.05:0,15,409	0/0:15,0:14:34.93:0,35,686	0/0:28,0:22:39.14:0,39,1002	0/0:7,0:7:21.02:0,21,610	0/0:11,0:11:30.07:0,30,803	0/0:16,0:16:48.14:0,48,1455	1/1:2,12:14:35.91:471,36,0	0/0:12,0:12:36.08:0,36,943	0/0:9,0:9:27.08:0,27,756	0/0:9,0:9:24.05:0,24,558	0/0:17,0:17:48.13:0,48,1321	0/0:14,0:14:36.11:0,36,1110	0/0:14,0:14:42.10:0,42,1052	0/0:12,0:12:33.10:0,33,985	0/0:12,0:12:36.12:0,36,1039	0/0:15,0:15:45.12:0,45,1352	0/0:9,0:9:27.09:0,27,910	1/1:7,1:8:3.33:139,3,0	1/1:1,3:4:9.03:211,9,0	1/1:1,15:16:5.95:87,6,0	0/0:9,0:9:27.09:0,27,826	0/0:7,0:7:21.05:0,21,547	0/0:9,0:9:27.07:0,27,676	0/0:3,0:3:9.03:0,9,286	0/0:11,0:11:33.09:0,33,907	1/1:2,16:18:39.47:892,39,0	0/0:4,0:4:12.04:0,12,340
chr10	103884856	.	T	TATTTGCATATCTCGG	20247.42	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=7.857;DP=892;FS=8.286;HRun=0;HaplotypeScore=373.8364;InbreedingCoeff=0.9225;MQ=71.72;MQ0=0;MQRankSum=-15.110;QD=51.39;ReadPosRankSum=-2.525;VQSLOD=2.7864;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,141,4645	0/0:15,0:15:30.06:0,30,846	0/0:26,0:27:44.30:0,44,552	0/0:21,0:21:38.99:0,39,512	1/1:54,0:54:99:2353,112,0	0/0:17,0:17:51.12:0,51,1732	0/0:32,0:32:81.13:0,81,2068	1/1:43,0:43:99:2177,102,0	0/0:28,0:28:72.14:0,72,2126	0/0:47,0:47:99:0,126,3125	0/0:18,0:18:42.07:0,42,1184	0/0:31,0:31:78.13:0,78,2253	0/0:28,0:28:75.12:0,75,2162	0/0:29,0:29:78.14:0,78,2158	1/1:38,0:38:93.35:2143,93,0	1/1:43,0:43:94.21:2248,94,0	0/0:34,0:34:93.18:0,93,2635	0/0:24,0:24:63.15:0,63,1836	1/1:10,14:26:59.04:1034,59,0	1/1:12,12:27:44.89:2241,45,0	1/1:37,0:37:85.99:1156,86,0	1/1:39,0:39:88.83:1725,89,0	0/0:23,0:23:57.13:0,57,1663	0/0:48,0:48:99:0,129,3778	0/0:21,0:21:57.06:0,57,1466	0/1:42,0:42:27.45:2069,0,27	1/1:15,15:33:45.15:2904,45,0	1/1:12,0:12:17.64:198,18,0
chr10	103887677	.	T	TGGTGCACAG	16329.66	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-6.724;DP=556;FS=1.675;HRun=0;HaplotypeScore=146.3894;InbreedingCoeff=0.9860;MQ=83.80;MQ0=0;MQRankSum=-14.465;QD=93.85;ReadPosRankSum=-1.913;VQSLOD=5.0067;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,3944	0/0:6,0:6:18.06:0,18,534	0/0:21,0:21:57.18:0,57,1452	0/0:18,0:18:36.16:0,36,1147	1/1:8,4:15:12.04:535,12,0	0/0:17,0:17:42.14:0,42,1241	0/0:24,0:24:66.23:0,66,1954	1/1:13,7:23:57.15:2054,57,0	0/0:23,0:23:63.20:0,63,1724	0/0:21,0:21:42.14:0,42,1193	0/0:11,0:11:30.10:0,30,895	0/0:18,0:18:54.17:0,54,1533	0/0:26,0:26:72.22:0,72,1946	0/0:28,0:28:84.28:0,84,2442	1/1:4,14:21:51.18:2414,51,0	1/1:6,12:19:54.14:2337,54,0	0/0:31,0:31:84.29:0,84,2400	0/0:30,0:30:90.27:0,90,2554	1/1:4,5:13:33.09:1280,33,0	1/1:4,4:8:18.06:850,18,0	1/1:9,6:17:15.05:683,15,0	1/1:6,9:16:33.11:1552,33,0	0/0:9,0:9:24.08:0,24,715	0/0:36,0:36:99:0,105,3055	0/0:14,0:14:33.11:0,33,947	1/1:9,12:23:38.06:2591,38,0	1/1:7,7:15:32.73:1460,33,0	1/1:0,4:4:12.04:572,12,0
chr10	103891935	.	A	AC	10223.13	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.998;DP=737;FS=7.775;HRun=2;HaplotypeScore=87.9485;InbreedingCoeff=0.9998;MQ=68.95;MQ0=3;MQRankSum=-3.224;QD=36.51;ReadPosRankSum=0.547;VQSLOD=5.0218;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,105,1362	0/0:10,0:10:27.09:0,27,351	0/0:20,0:19:47.99:0,48,553	0/0:18,0:14:39.11:0,39,490	1/1:2,23:25:60.20:898,60,0	0/0:13,0:13:39.13:0,39,506	0/0:33,0:33:96.29:0,96,1230	1/1:1,26:20:60.19:866,60,0	0/0:33,0:33:99:0,99,1270	0/0:34,0:34:87.28:0,87,1130	0/0:32,0:32:93.29:0,93,1193	0/0:43,0:43:99:0,123,1539	0/0:27,0:27:78.25:0,78,1008	0/0:21,0:21:63.20:0,63,818	1/1:0,32:32:87.25:1279,87,0	1/1:2,18:20:54.18:798,54,0	0/0:25,0:25:72.23:0,72,932	0/0:19,0:19:57.18:0,57,735	1/1:0,17:15:42.02:548,42,0	1/1:0,24:23:54.14:784,54,0	1/1:0,29:28:69.23:1034,69,0	1/1:1,28:28:75.25:1112,75,0	0/0:37,0:37:99:0,111,1424	0/0:23,0:23:69.20:0,69,879	0/0:27,0:27:81.26:0,81,1049	1/1:4,31:35:60.28:1331,60,0	1/1:1,21:21:45.15:674,45,0	1/1:0,20:20:60.20:899,60,0
chr10	103892843	.	G	GAAA	5401.21	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=9.719;DP=626;FS=1.547;HRun=10;HaplotypeScore=124.2429;InbreedingCoeff=0.9907;MQ=68.63;MQ0=0;MQRankSum=-1.102;QD=22.05;ReadPosRankSum=-5.218;VQSLOD=2.0347;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,123,1396	0/0:15,0:15:35.09:0,35,456	0/0:17,0:16:29.84:0,30,346	0/0:15,0:14:12.28:0,12,126	1/1:8,14:25:46.06:484,46,0	0/0:18,0:18:51.10:0,51,596	0/0:19,0:19:48.09:0,48,584	1/1:15,0:23:52.06:408,52,0	0/0:26,0:26:74.69:0,75,884	0/0:18,0:19:29.92:0,30,346	0/0:24,0:25:46.14:0,46,516	0/0:23,0:23:63.04:0,63,744	0/0:20,0:21:54.03:0,54,613	0/0:12,0:12:30.02:0,30,334	1/1:4,22:28:49.94:860,50,0	1/1:9,6:17:40.78:566,41,0	0/0:32,0:32:84.13:0,84,991	0/0:24,0:24:57.12:0,57,677	1/1:5,2:21:48.23:412,48,0	1/1:6,1:30:71.65:571,72,0	1/1:3,0:19:38.86:299,39,0	1/1:1,17:21:47.94:669,48,0	0/0:25,0:25:57.28:0,57,688	0/0:21,0:21:54.13:0,54,657	0/0:21,0:23:55.98:0,56,627	1/1:10,19:30:60:770,60,0	1/1:5,0:20:22.96:165,23,0	1/1:2,7:10:12.02:196,12,0
chr10	103894264	.	TA	T	1922.73	PASS	AB=0.867;AC=13;AF=0.232;AN=56;BaseQRankSum=8.823;DP=493;FS=2.008;HRun=10;HaplotypeScore=52.6150;InbreedingCoeff=0.8850;MQ=83.63;MQ0=0;MQRankSum=-2.387;QD=17.32;ReadPosRankSum=2.162;VQSLOD=4.2779;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.16:0,69,746	0/0:6,0:6:18.02:0,18,187	0/0:19,0:19:20.39:0,20,231	0/0:13,0:13:16.28:0,16,156	1/1:0,15:16:47.03:397,47,0	0/0:8,0:8:24.06:0,24,265	0/0:28,0:28:69.19:0,69,762	0/0:24,1:25:42.11:0,42,458	0/0:14,0:14:39.10:0,39,429	0/0:13,0:13:36.10:0,36,397	0/0:13,0:13:36.06:0,36,384	0/0:23,0:23:48.07:0,48,509	0/0:24,1:25:46.13:0,46,731	0/0:18,1:19:31.09:0,31,563	1/1:3,15:19:35.01:292,35,0	1/1:1,13:14:35.99:313,36,0	0/0:31,1:32:58.13:0,58,844	0/1:11,2:13:19:19,0,265	0/0:15,1:16:13.05:0,13,372	0/0:10,0:10:27.07:0,27,299	0/0:27,0:27:66.15:0,66,712	1/1:1,9:11:29.03:239,29,0	0/0:14,1:16:13.35:0,13,347	0/0:20,0:20:51.12:0,51,555	0/0:12,0:12:36.10:0,36,398	1/1:3,16:19:17.80:384,18,0	0/0:15,1:18:24.74:0,25,459	1/1:0,19:19:53.99:469,54,0
chr10	103894954	.	GA	G	3797.35	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.332;DP=684;FS=6.736;HRun=9;HaplotypeScore=66.9241;InbreedingCoeff=0.9695;MQ=70.56;MQ0=0;MQRankSum=-1.706;QD=23.59;ReadPosRankSum=0.390;VQSLOD=4.4894;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1345	0/0:6,0:6:15.04:0,15,173	0/0:15,0:15:34.44:0,34,338	0/0:13,0:12:4.72:0,5,159	1/1:2,29:31:81.03:741,81,0	0/0:23,0:23:66.20:0,66,762	0/0:15,0:15:45.13:0,45,518	0/0:34,0:34:57.40:0,57,836	0/0:26,0:26:69.21:0,69,796	0/0:33,0:33:96.28:0,96,1107	0/0:23,0:23:51.15:0,51,589	0/0:21,0:21:60.16:0,60,676	0/0:24,0:24:63.13:0,63,701	0/0:26,0:26:72.18:0,72,815	1/1:2,28:30:78.04:714,78,0	1/1:2,24:26:69.04:632,69,0	0/0:42,0:42:99:0,117,1340	0/0:20,0:20:51.13:0,51,577	0/0:22,0:22:54.15:0,54,616	0/0:21,0:21:60.15:0,60,678	0/0:18,1:19:23.65:0,24,505	1/1:4,27:31:78.04:714,78,0	0/0:17,0:17:45.13:0,45,519	0/0:31,0:31:78.23:0,78,899	0/0:22,0:22:66.17:0,66,740	1/1:3,32:35:29.80:778,30,0	0/0:28,0:27:69.20:0,69,795	1/1:0,8:8:24.01:220,24,0
chr10	103897919	.	A	AC	1197.37	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=11.945;DP=594;FS=0.000;HRun=1;HaplotypeScore=80.7496;InbreedingCoeff=0.8952;MQ=57.29;MQ0=18;MQRankSum=-7.170;QD=9.43;ReadPosRankSum=-1.927;VQSLOD=0.3980;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,114,1316	0/0:5,0:5:12.04:0,12,154	0/1:38,0:11:1.98:2,0,85	0/0:41,0:14:19.52:0,20,185	1/1:23,4:27:56.97:390,57,0	0/0:14,0:13:36.10:0,36,448	0/0:18,0:18:35.62:0,36,542	0/0:15,0:15:42:0,42,450	0/0:11,0:11:33.08:0,33,395	0/0:18,0:17:45.07:0,45,510	0/0:14,0:14:36.07:0,36,433	0/0:17,0:17:44.92:0,45,557	0/0:13,0:13:39.08:0,39,472	0/0:16,0:16:48.12:0,48,585	1/1:16,4:19:46.44:325,46,0	0/0:13,0:13:39.10:0,39,463	0/0:42,0:42:92.02:0,92,1240	0/0:33,0:33:89.99:0,90,1000	0/0:23,0:23:65.84:0,66,687	0/0:20,0:20:47.95:0,48,614	0/0:21,0:21:62.18:0,62,721	1/1:13,6:18:39.22:279,39,0	0/0:19,0:18:28.44:0,28,543	0/0:26,0:25:75.20:0,75,919	0/0:24,0:24:66.06:0,66,727	1/1:16,4:18:51.21:329,51,0	0/0:20,0:20:57.09:0,57,664	1/1:2,1:3:5.83:41,6,0
chr10	103897928	.	A	AC	809.76	PASS	AB=0.778;AC=6;AF=0.107;AN=56;BaseQRankSum=11.594;DP=593;FS=3.241;HRun=0;HaplotypeScore=83.1693;InbreedingCoeff=0.2765;MQ=57.80;MQ0=16;MQRankSum=-5.608;QD=8.80;ReadPosRankSum=-1.110;VQSLOD=3.3497;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,117,1508	0/0:5,0:5:12.04:0,12,167	0/0:36,0:9:14.98:0,15,202	0/0:39,0:16:19.07:0,19,274	1/1:13,13:26:6.62:277,7,0	0/0:15,0:14:42.11:0,42,537	0/0:18,0:18:48.92:0,49,632	0/0:18,0:18:45.09:0,45,574	0/0:12,0:12:36.10:0,36,468	0/0:16,0:15:44.84:0,45,562	0/0:12,0:12:36.11:0,36,485	0/0:20,0:20:51.69:0,52,670	0/0:15,0:15:45.07:0,45,566	0/0:16,0:16:48.16:0,48,667	0/1:11,7:17:18.23:189,0,18	0/0:13,0:13:39.11:0,39,510	0/0:41,0:41:94.13:0,94,1386	0/0:31,0:31:90.08:0,90,1159	0/0:23,0:23:66.18:0,66,830	0/0:17,0:17:41.94:0,42,602	0/0:21,0:21:63.19:0,63,847	0/1:12,7:18:31.89:186,0,32	0/0:21,0:20:55.85:0,56,700	0/0:27,0:26:81.22:0,81,1086	0/0:22,0:22:63.19:0,63,844	0/1:16,6:20:44.62:200,0,45	0/0:20,0:20:60.17:0,60,799	0/1:6,1:7:4.30:81,0,4
chr10	103897929	.	AAC	A	2246.51	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.888;DP=595;FS=7.541;HRun=0;HaplotypeScore=88.9254;InbreedingCoeff=0.9853;MQ=58.15;MQ0=15;MQRankSum=-10.143;QD=24.42;ReadPosRankSum=-1.577;VQSLOD=3.4612;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,119,1855	0/0:5,0:5:12.04:0,12,222	0/0:36,0:9:15.40:0,15,301	0/0:38,0:16:35.95:0,36,433	1/1:18,8:26:53.63:542,54,0	0/0:16,0:15:45.12:0,45,730	0/0:19,0:19:54.15:0,54,896	0/0:18,0:18:51.09:0,51,793	0/0:12,0:12:36.09:0,36,604	0/0:16,0:16:25.72:0,26,729	0/0:12,0:12:36.12:0,36,650	0/0:19,0:19:57.15:0,57,928	0/0:15,0:15:45.09:0,45,748	0/0:16,0:16:48.16:0,48,891	1/1:10,8:17:46.33:500,46,0	0/0:13,0:13:38.98:0,39,637	0/0:42,0:42:99:0,120,1995	0/0:31,0:31:87.62:0,88,1534	0/0:23,0:23:69.17:0,69,1067	0/0:17,0:17:48.10:0,48,826	0/0:21,0:21:60.21:0,60,1087	1/1:11,8:18:48.57:564,49,0	0/0:21,0:20:60.08:0,60,985	0/0:27,0:26:81.24:0,81,1419	0/0:22,0:22:63.19:0,63,1106	1/1:11,11:20:46.40:673,46,0	0/0:21,0:21:63.13:0,63,1081	1/1:6,1:7:14.93:142,15,0
chr10	103897940	.	C	CA	1146.58	PASS	AB=0.651;AC=5;AF=0.089;AN=56;BaseQRankSum=10.704;DP=573;FS=1.203;HRun=3;HaplotypeScore=78.6975;InbreedingCoeff=-0.0891;MQ=62.48;MQ0=9;MQRankSum=-8.113;QD=12.74;ReadPosRankSum=0.077;VQSLOD=2.1481;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,105,1222	0/0:4,0:4:12.04:0,12,143	0/0:31,0:13:25.68:0,26,317	0/0:31,1:15:29:0,29,331	0/1:10,16:26:42.80:339,0,43	0/0:17,0:17:51.15:0,51,606	0/0:21,0:21:63.19:0,63,756	0/0:20,0:20:45.14:0,45,539	0/0:14,0:14:39.05:0,39,450	0/0:18,0:18:36.11:0,36,430	0/0:14,0:14:36.09:0,36,415	0/0:21,0:21:60.18:0,60,719	0/0:11,0:11:27.08:0,27,324	0/0:17,0:17:45.14:0,45,539	0/1:8,9:18:97.79:261,0,98	0/0:11,0:11:32.46:0,32,368	0/0:46,0:46:99:0,129,1531	0/0:24,0:24:69.21:0,69,827	0/0:22,0:22:63.17:0,63,731	0/0:13,0:13:35.32:0,35,403	0/0:15,0:15:42.13:0,42,504	0/1:7,9:15:25.39:275,0,25	0/0:17,0:17:33.10:0,33,393	0/0:31,0:30:90.27:0,90,1075	0/0:23,0:23:66.20:0,66,787	0/1:12,9:20:99:269,0,130	0/0:22,0:22:60.18:0,60,710	0/1:4,4:8:16.39:121,0,16
chr10	103898147	.	CT	C	993.92	PASS	AB=0.818;AC=12;AF=0.214;AN=56;BaseQRankSum=4.197;DP=538;FS=2.769;HRun=15;HaplotypeScore=63.6310;InbreedingCoeff=0.4950;MQ=62.91;MQ0=9;MQRankSum=-0.491;QD=6.85;ReadPosRankSum=1.750;VQSLOD=2.8075;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,3:32:16.28:0,16,368	0/0:9,0:11:23.71:0,24,188	0/0:25,0:7:2.99:0,3,24	0/0:24,0:9:4.86:0,5,66	1/1:7,18:27:56.65:353,57,0	0/0:17,1:19:15.70:0,16,226	0/0:9,0:10:8.48:0,8,102	0/0:17,0:30:47.35:0,47,277	0/1:16,1:17:0.48:0,0,220	0/0:20,0:20:25.95:0,26,257	0/0:15,2:18:6.24:0,6,279	0/0:12,0:11:14.77:0,15,113	0/0:9,1:14:0.14:0,0,103	0/0:17,1:18:16.64:0,17,246	1/1:6,18:25:46.34:294,46,0	0/1:9,2:11:8.62:9,0,163	0/0:41,1:42:52.32:0,52,701	0/0:12,0:16:35.57:0,36,273	0/0:6,0:17:26.09:0,26,150	0/0:8,0:21:39.08:0,39,233	0/0:5,0:6:13.36:0,13,87	0/1:6,9:15:1.06:106,0,1	0/1:10,2:12:13.14:13,0,101	0/0:17,1:18:13.65:0,14,235	0/0:19,0:19:33.21:0,33,264	1/1:13,15:28:17.49:229,17,0	0/0:7,0:18:4:0,4,91	1/1:1,9:10:3.24:147,3,0
chr10	103900112	.	TTG	T	41.76	PASS	AB=0.977;AC=8;AF=0.200;AN=40;BaseQRankSum=2.119;DP=665;FS=1.509;HRun=0;HaplotypeScore=83.6162;InbreedingCoeff=0.1161;MQ=64.85;MQ0=15;MQRankSum=1.815;QD=0.29;ReadPosRankSum=-1.112;VQSLOD=0.9106;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:10,0:9:3.01:0,3,44	./.	./.	0/0:24,0:23:2.99:0,3,24	0/1:10,0:10:22.09:22,0,39	0/1:26,3:28:4.61:5,0,151	./.	0/0:17,0:17:9.03:0,9,125	0/0:31,0:31:17.88:0,18,197	./.	0/1:26,0:26:20.42:20,0,78	0/0:20,0:20:3.01:0,3,44	0/1:19,0:18:20.85:21,0,75	0/0:32,5:34:0:0,0,0	0/0:18,0:18:3.01:0,3,44	1/1:30,6:36:8.39:71,8,0	0/0:26,0:27:9:0,9,109	./.	0/0:16,0:16:6.01:0,6,70	0/0:53,0:53:20.40:0,20,213	./.	0/0:21,0:21:8.99:0,9,88	0/0:36,0:36:15.04:0,15,194	0/0:15,0:15:3.01:0,3,41	1/1:26,0:26:2.86:16,3,0	0/0:24,0:23:11.39:0,11,119	./.
chr10	103900848	.	GTATC	G	2668.76	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.493;DP=419;FS=27.935;HRun=0;HaplotypeScore=73.6314;InbreedingCoeff=0.9845;MQ=54.65;MQ0=4;MQRankSum=-2.130;QD=25.18;ReadPosRankSum=-1.136;VQSLOD=1.5025;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:33.09:0,33,744	0/0:5,0:5:12.04:0,12,266	0/0:23,0:13:33.03:0,33,639	0/0:18,0:12:27.09:0,27,576	0/0:15,0:15:39.12:0,39,876	0/0:15,0:15:39.12:0,39,812	0/0:7,0:7:21.07:0,21,485	1/1:8,30:38:72.20:1163,72,0	0/0:7,0:7:21.07:0,21,545	0/0:16,0:16:39.11:0,39,848	0/0:17,0:16:39.11:0,39,913	0/0:13,0:13:30.10:0,30,779	0/0:23,0:23:66.21:0,66,1532	0/0:18,0:18:54.02:0,54,1184	0/0:16,0:16:45.14:0,45,1042	0/0:8,0:8:21.07:0,21,517	0/0:12,0:12:33.10:0,33,749	0/0:14,0:14:42.14:0,42,1082	1/1:1,10:11:29.99:424,30,0	1/1:8,6:14:23.91:425,24,0	1/1:5,18:23:17.91:293,18,0	0/0:10,0:10:27.09:0,27,606	0/0:14,0:13:33.11:0,33,775	0/0:9,0:9:18.06:0,18,467	0/0:14,0:14:42.12:0,42,1036	0/0:11,0:11:30.10:0,30,778	1/1:2,18:20:30.10:538,30,0	0/0:15,0:15:45.10:0,45,859
chr10	103900959	.	G	GTA	914.17	PASS	AB=1.000;AC=11;AF=0.220;AN=50;BaseQRankSum=-0.908;DP=157;FS=19.299;HRun=0;HaplotypeScore=28.4439;InbreedingCoeff=0.5811;MQ=69.27;MQ0=0;MQRankSum=-0.589;QD=19.87;ReadPosRankSum=-4.002;VQSLOD=1.1093;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:9.03:0,9,116	0/0:3,0:3:3.01:0,3,39	0/0:3,0:2:2.98:0,3,21	0/1:10,0:4:1.02:1,0,11	0/0:7,0:7:14.98:0,15,131	0/0:3,0:3:6:0,6,63	0/0:4,0:4:12.02:0,12,141	1/1:3,19:22:53.74:666,54,0	0/0:6,0:6:9.01:0,9,102	0/0:9,0:9:21:0,21,216	0/0:4,0:4:9.03:0,9,117	0/0:2,0:2:6.02:0,6,75	0/0:4,0:4:9.01:0,9,101	0/0:4,0:4:2.11:0,2,37	0/0:4,0:4:6.02:0,6,67	0/0:1,0:1:3.01:0,3,38	0/0:21,0:20:48.07:0,48,576	0/0:9,0:9:17.99:0,18,193	1/1:2,0:2:5.96:47,6,0	1/1:3,0:3:6.01:72,6,0	1/1:2,0:2:2.99:24,3,0	./.	./.	./.	0/0:5,0:5:15.04:0,15,185	0/0:6,0:6:12.01:0,12,117	1/1:6,1:6:18.04:248,18,0	0/0:8,0:8:18.05:0,18,207
chr10	103902009	.	AC	A	4973.33	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.355;DP=703;FS=4.335;HRun=1;HaplotypeScore=65.2537;InbreedingCoeff=0.9962;MQ=79.64;MQ0=0;MQRankSum=1.307;QD=37.39;ReadPosRankSum=-2.599;VQSLOD=4.2424;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,147,2297	0/0:6,0:6:15.05:0,15,240	0/0:17,0:17:51.17:0,51,813	0/0:15,0:15:38.94:0,39,526	0/0:26,0:26:78.23:0,78,1212	0/0:14,0:14:42.11:0,42,618	0/0:26,0:26:78.24:0,78,1217	1/1:0,34:34:99:1350,99,0	0/0:27,0:27:78.24:0,78,1197	0/0:47,0:47:99:0,138,2145	0/0:16,0:16:48.15:0,48,739	0/0:30,0:30:90.28:0,90,1391	0/0:25,0:25:75.24:0,75,1172	0/0:27,0:27:81.20:0,81,1183	0/0:32,0:31:96.31:0,96,1496	0/0:28,0:28:84.27:0,84,1319	0/0:27,0:27:78.70:0,79,1193	0/0:19,0:19:57.19:0,57,902	1/1:0,21:21:63.19:845,63,0	1/1:0,18:18:54.14:723,54,0	1/1:0,32:32:78.26:1091,78,0	0/0:21,0:21:63.21:0,63,1006	0/0:26,0:26:78.25:0,78,1219	0/0:24,0:24:72.25:0,72,1146	0/0:20,0:20:60.20:0,60,954	0/0:38,0:38:99:0,114,1738	1/1:0,28:28:69.23:965,69,0	0/0:10,0:10:30.10:0,30,479
chr10	103902390	.	A	ATG	490.51	PASS	AB=0.994;AC=15;AF=0.300;AN=50;BaseQRankSum=-3.850;DP=541;FS=22.437;HRun=0;HaplotypeScore=87.8203;InbreedingCoeff=0.1967;MQ=61.85;MQ0=9;MQRankSum=0.031;QD=2.05;ReadPosRankSum=-2.457;VQSLOD=-0.1710;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:33:24.08:24,0,110	0/0:18,0:18:9.02:0,9,98	./.	./.	0/0:21,0:24:5.64:0,6,27	0/1:21,0:21:16.93:17,0,56	0/0:20,0:20:18.01:0,18,185	1/1:30,0:30:3.02:7,3,0	0/0:18,0:18:9:0,9,89	./.	0/0:13,0:12:3.01:0,3,33	0/0:13,0:12:2.71:0,3,32	0/0:15,0:15:2.79:0,3,32	0/0:8,0:8:3.01:0,3,32	0/0:12,0:17:2.84:0,3,15	0/0:15,0:17:14.71:0,15,126	0/1:25,1:29:23.98:24,0,119	1/1:9,12:22:18.06:267,18,0	1/1:12,0:10:3.01:44,3,0	1/1:14,3:18:3.01:44,3,0	1/1:30,1:29:17.79:178,18,0	0/0:9,0:12:8.52:0,9,42	0/0:10,0:10:3:0,3,33	0/1:20,0:22:14.74:15,0,119	0/0:24,0:24:14.90:0,15,162	0/0:11,0:16:11.98:0,12,57	0/1:19,0:19:17.98:18,0,27	0/0:6,0:9:2.84:0,3,14
chr10	103903092	.	T	TG	566.41	PASS	AB=0.964;AC=5;AF=0.093;AN=54;BaseQRankSum=7.893;DP=733;FS=0.679;HRun=1;HaplotypeScore=126.4264;InbreedingCoeff=0.3825;MQ=42.34;MQ0=65;MQRankSum=-5.987;QD=5.10;ReadPosRankSum=-1.748;VQSLOD=-0.2336;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:19:40.18:0,40,432	0/0:7,0:7:3.27:0,3,84	0/0:39,0:5:15:0,15,159	0/0:61,0:11:24.96:0,25,305	0/0:13,0:12:16.76:0,17,174	0/0:20,0:17:38.96:0,39,465	0/0:48,0:41:28.20:0,28,766	0/1:23,0:14:8.88:203,0,9	0/0:26,0:25:48.15:0,48,616	0/0:27,0:22:27.05:0,27,654	0/0:13,0:11:20.28:0,20,268	0/0:27,0:25:32.94:0,33,390	0/0:24,0:23:51.27:0,51,721	0/0:25,0:25:54.05:0,54,652	0/0:23,0:20:28.98:0,29,211	0/0:26,0:24:52.98:0,53,661	0/0:34,0:32:86.99:0,87,1016	0/0:29,0:29:67.59:0,68,829	0/1:20,1:14:12.29:155,0,12	./.	0/1:55,4:41:8.19:187,0,8	0/0:32,0:29:19.70:0,20,204	0/0:14,0:14:26.97:0,27,304	0/0:37,0:35:70.46:0,70,878	0/0:16,0:15:21.07:0,21,270	0/0:37,0:34:62.45:0,62,780	1/1:8,0:8:15:142,15,0	0/0:20,0:16:28.74:0,29,321
chr10	103903094	.	T	TCTGGG	658.44	PASS	AB=0.981;AC=6;AF=0.107;AN=56;BaseQRankSum=6.849;DP=723;FS=1.729;HRun=0;HaplotypeScore=155.7414;InbreedingCoeff=0.3037;MQ=41.92;MQ0=68;MQRankSum=-4.198;QD=4.91;ReadPosRankSum=-2.305;VQSLOD=2.4458;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:20:45.11:0,45,799	0/0:7,0:6:11.81:0,12,145	0/0:41,0:5:12.03:0,12,193	0/0:60,0:10:24.06:0,24,379	0/0:11,0:11:17.89:0,18,293	0/0:19,0:16:36.12:0,36,806	0/0:48,0:41:70.71:0,71,1348	0/1:19,0:9:44.97:182,0,45	0/0:25,0:23:48.01:0,48,1015	0/0:27,0:22:59.63:0,60,1124	0/0:13,0:11:20.87:0,21,481	0/0:27,0:25:35.75:0,36,745	0/0:26,0:24:62.85:0,63,1178	0/0:25,0:25:52.07:0,52,1067	0/0:22,0:19:12.24:0,12,324	0/0:25,0:23:57.15:0,57,1146	0/0:34,0:32:87.17:0,87,1741	0/0:27,0:27:70.97:0,71,1417	0/1:18,0:12:48.46:201,0,48	0/0:4,0:2:0:0,0,0	0/1:56,3:42:29.82:30,0,91	0/1:30,0:27:0.78:1,0,281	0/0:14,0:14:27.09:0,27,554	0/0:37,0:35:71.97:0,72,1559	0/0:18,0:16:23.75:0,24,503	0/0:35,0:32:74.89:0,75,1261	1/1:5,1:6:17.98:366,18,0	0/0:20,0:16:17.91:0,18,458
chr10	103903101	.	G	GTGTA	1390.17	PASS	AB=0.903;AC=11;AF=0.196;AN=56;BaseQRankSum=0.053;DP=743;FS=28.951;HRun=0;HaplotypeScore=139.6713;InbreedingCoeff=0.6646;MQ=46.43;MQ0=77;MQRankSum=-0.738;QD=8.23;ReadPosRankSum=0.888;VQSLOD=1.1634;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:21:41.88:0,42,434	0/0:6,0:5:5.39:0,5,54	0/1:50,0:7:2.63:3,0,55	0/0:70,0:10:0.33:0,0,29	1/1:8,1:9:14.46:176,14,0	0/0:19,0:16:36.02:0,36,432	0/0:54,0:45:72.35:0,72,832	0/0:22,0:11:19.97:0,20,114	0/0:21,0:19:36.01:0,36,505	0/0:26,0:21:48.01:0,48,406	0/0:14,0:12:21.86:0,22,232	0/0:23,0:21:38.98:0,39,549	0/0:21,0:19:34.80:0,35,445	0/0:25,0:24:38.93:0,39,540	1/1:8,12:20:8.09:438,8,0	0/0:24,0:21:42.85:0,43,609	0/0:32,0:31:62.48:0,62,834	0/0:29,0:28:70.21:0,70,843	0/0:17,0:11:20.52:0,21,106	0/1:5,0:3:0:0,0,0	0/0:69,0:47:12.16:0,12,91	1/1:24,3:23:20.86:274,21,0	0/0:13,0:13:29.24:0,29,258	0/0:38,0:37:68.31:0,68,987	0/0:20,0:18:29.88:0,30,360	0/1:20,14:29:39.33:418,0,39	0/0:6,0:6:14.21:0,14,77	1/1:17,0:15:14.64:235,15,0
chr10	103903124	.	TCTGGG	T	466.33	PASS	AB=0.887;AC=7;AF=0.130;AN=54;BaseQRankSum=7.551;DP=707;FS=3.871;HRun=0;HaplotypeScore=129.6680;InbreedingCoeff=-0.1467;MQ=50.69;MQ0=70;MQRankSum=-5.366;QD=2.02;ReadPosRankSum=-0.375;VQSLOD=2.5319;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:17:42.14:0,42,1229	0/0:7,0:6:2.23:0,2,284	0/1:90,0:11:3.08:3,0,167	0/0:96,0:12:20.05:0,20,231	0/0:9,0:8:15.05:0,15,452	0/0:16,0:14:33.05:0,33,864	0/0:50,0:41:36.44:0,36,2438	0/1:17,2:12:99:112,0,563	0/0:21,0:19:50.86:0,51,1141	0/1:18,0:17:38.31:38,0,1081	0/0:12,0:12:17.48:0,17,532	0/0:17,0:16:42.11:0,42,1048	0/0:21,0:19:51.08:0,51,1311	0/0:21,0:20:42.11:0,42,1093	0/0:18,0:15:22.88:0,23,523	0/0:21,0:19:54.15:0,54,1246	0/0:26,0:26:72.25:0,72,2046	0/0:21,0:20:57.06:0,57,1407	0/1:10,0:7:3.94:4,0,394	./.	0/1:49,7:35:72.85:108,0,73	0/0:20,1:18:20.62:0,21,571	0/0:13,0:12:10.95:0,11,840	0/0:32,0:30:62.74:0,63,1762	0/0:16,0:15:23.81:0,24,691	0/1:29,1:26:99:105,0,1272	0/1:0,5:5:31.75:215,0,32	0/0:15,0:12:21.06:0,21,896
chr10	103903140	.	G	GGT	730.45	PASS	AB=0.972;AC=12;AF=0.214;AN=56;BaseQRankSum=4.493;DP=795;FS=0.000;HRun=0;HaplotypeScore=142.8907;InbreedingCoeff=0.4873;MQ=51.33;MQ0=91;MQRankSum=-4.335;QD=3.12;ReadPosRankSum=-4.753;VQSLOD=0.9588;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:20:39.12:0,39,487	0/1:7,0:7:2.64:3,0,68	0/1:76,0:12:3.43:3,0,39	0/0:83,0:16:4.06:0,4,16	0/0:14,0:12:21.07:0,21,262	0/0:16,0:14:27.06:0,27,312	0/0:55,0:45:76.95:0,77,844	1/1:27,0:18:2.36:210,2,0	0/0:29,0:25:51.01:0,51,589	0/0:25,0:24:45.33:0,45,570	0/0:17,0:18:21.35:0,21,212	0/0:20,1:18:13.40:0,13,386	0/0:21,0:19:36.11:0,36,433	0/0:24,0:22:42.13:0,42,520	0/1:15,0:12:14.91:15,0,83	0/0:23,0:19:36:0,36,384	0/0:31,0:30:66.11:0,66,766	0/0:24,0:23:57.18:0,57,699	0/1:17,0:9:13.50:103,0,14	1/1:9,2:8:2.83:20,3,0	1/1:59,7:46:20.91:322,21,0	0/0:22,0:20:25.71:0,26,302	0/0:17,0:16:44.77:0,45,494	0/0:38,0:36:47.70:0,48,508	0/0:20,0:18:23.79:0,24,260	0/0:36,0:28:4.56:0,5,560	1/1:4,4:7:19.29:206,19,0	0/0:15,0:12:16.56:0,17,259
chr10	103903256	.	GTA	G	306.51	PASS	AB=0.943;AC=11;AF=0.204;AN=54;BaseQRankSum=6.512;DP=659;FS=8.632;HRun=0;HaplotypeScore=152.1926;InbreedingCoeff=-0.1573;MQ=36.49;MQ0=49;MQRankSum=-7.204;QD=1.40;ReadPosRankSum=0.377;VQSLOD=2.2367;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:13.52:0,14,225	0/0:5,0:4:5.77:0,6,74	0/0:65,0:8:11.24:0,11,270	0/0:61,1:4:8.78:0,9,138	0/0:17,0:12:6.02:0,6,115	0/0:13,1:13:5.59:0,6,82	0/1:35,1:25:1.52:2,0,330	0/1:27,1:11:33.41:33,0,142	0/1:26,1:27:39.38:39,0,257	0/1:20,2:18:99:139,0,157	./.	0/0:20,1:19:21.74:0,22,402	0/1:17,1:17:18.18:18,0,306	0/0:19,0:17:0.87:0,1,53	0/0:11,0:9:2.88:0,3,35	0/1:21,4:21:48.41:48,0,112	0/1:14,1:14:5.87:6,0,122	0/1:13,0:10:24:24,0,223	0/0:14,2:10:5.26:0,5,164	0/0:12,3:14:12.04:0,12,200	0/0:81,4:63:53.24:0,53,1108	0/0:19,2:21:14.90:0,15,249	0/0:15,1:14:12.26:0,12,308	0/0:22,1:22:17.70:0,18,286	0/0:12,2:10:10.22:0,10,157	0/1:28,1:20:99:112,0,350	1/1:5,0:3:2.92:17,3,0	0/0:5,0:5:6.91:0,7,117
chr10	103903257	.	TATGTC	T	599.57	PASS	AB=0.981;AC=20;AF=0.357;AN=56;BaseQRankSum=6.140;DP=630;FS=13.649;HRun=0;HaplotypeScore=154.5143;InbreedingCoeff=-0.2676;MQ=36.98;MQ0=39;MQRankSum=-8.067;QD=2.06;ReadPosRankSum=-2.725;VQSLOD=1.2313;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:16:12.90:13,0,211	0/0:3,1:3:5.98:0,6,86	0/0:61,0:8:18.04:0,18,387	0/0:61,0:4:8.90:0,9,202	0/0:14,0:10:5.89:0,6,117	0/1:13,0:12:40.65:41,0,94	0/0:36,0:25:2.42:0,2,219	0/1:26,0:10:43.45:43,0,54	0/1:27,0:27:36.96:37,0,286	0/1:19,0:16:99:100,0,184	1/1:11,0:10:2.61:14,3,0	0/1:20,1:19:11.15:11,0,284	0/1:18,0:17:51.93:52,0,218	0/1:15,4:17:11.08:11,0,73	1/1:11,0:9:1.80:6,2,0	0/1:23,1:20:73.86:153,0,74	0/1:15,0:13:55.09:73,0,55	0/0:13,0:10:8.11:0,8,228	0/0:15,0:10:12.04:0,12,178	0/0:15,0:14:6.79:0,7,116	0/0:83,0:63:11.71:0,12,945	0/1:21,0:21:36.14:36,0,156	0/1:15,0:13:1.48:1,0,234	0/0:22,0:21:5.78:0,6,241	0/0:14,0:10:1.36:0,1,98	0/1:26,0:19:89.71:90,0,343	1/1:4,0:3:3.01:58,3,0	0/1:4,0:4:8.86:9,0,68
chr10	103903260	.	GTC	G	532.93	PASS	AB=0.931;AC=17;AF=0.304;AN=56;BaseQRankSum=5.566;DP=586;FS=23.139;HRun=0;HaplotypeScore=140.8661;InbreedingCoeff=-0.2302;MQ=37.15;MQ0=33;MQRankSum=-7.757;QD=2.19;ReadPosRankSum=-0.455;VQSLOD=0.4001;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:15:3.02:3,0,73	0/0:4,0:3:2.96:0,3,19	0/0:58,0:8:17.88:0,18,239	0/0:59,0:4:8.87:0,9,131	0/0:14,0:10:6:0,6,59	0/1:12,0:11:26.17:26,0,30	0/1:30,2:24:13.75:14,0,98	0/1:18,0:7:40.10:71,0,40	0/1:21,4:25:72.74:125,0,73	0/1:18,0:15:74.47:119,0,74	1/1:12,0:11:2.93:20,3,0	0/0:17,1:17:13.01:0,13,127	0/1:16,1:16:21.86:22,0,128	0/0:16,2:16:0.26:0,0,33	0/0:10,1:9:2.74:0,3,15	0/1:20,2:19:30.86:109,0,31	0/1:13,1:12:15.87:16,0,46	0/1:11,1:9:54.57:55,0,103	0/1:10,0:10:5.06:5,0,88	0/0:13,0:12:8.81:0,9,58	0/0:75,2:60:59.09:0,59,468	0/0:19,1:20:12.26:0,12,119	0/0:14,0:12:17.83:0,18,145	0/0:20,0:19:12.52:0,13,119	0/0:14,0:10:10.97:0,11,85	0/1:23,2:18:84.16:84,0,164	1/1:4,0:3:2.04:6,2,0	0/1:3,1:4:3.77:4,0,38
chr10	103908182	.	A	AGAAG	476.76	PASS	AB=0.943;AC=15;AF=0.300;AN=50;BaseQRankSum=6.082;DP=527;FS=8.896;HRun=0;HaplotypeScore=85.8847;InbreedingCoeff=0.3759;MQ=66.19;MQ0=4;MQRankSum=-2.719;QD=2.71;ReadPosRankSum=-1.214;VQSLOD=0.5890;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:3.98:188,0,4	0/1:6,3:8:0:0,0,0	./.	./.	0/0:13,0:12:3.01:0,3,45	0/0:9,0:9:9.01:0,9,114	0/0:27,0:26:1.76:0,2,174	./.	0/0:22,0:22:21.06:0,21,296	0/0:18,0:18:15.05:0,15,210	0/0:11,0:11:3.01:0,3,45	0/0:23,0:23:24.05:0,24,305	1/1:11,8:19:3.01:57,3,0	0/0:29,0:29:27:0,27,389	0/0:24,0:24:18.06:0,18,271	0/0:20,0:20:30.07:0,30,395	0/0:34,0:34:36.08:0,36,500	0/1:27,0:27:19.72:20,0,244	1/1:12,0:12:6.02:68,6,0	0/1:20,0:20:6.95:98,0,7	0/1:12,0:12:20.92:21,0,40	1/1:13,0:12:6.01:83,6,0	1/1:7,2:9:1.25:3,1,0	0/0:44,0:44:56.73:0,57,809	0/0:19,0:19:21.02:0,21,274	0/0:16,0:16:15.05:0,15,226	1/1:20,0:20:8.89:81,9,0	0/0:1,0:1:3.01:0,3,45
chr10	103908235	.	GAAGA	G	2043.32	PASS	AB=0.956;AC=18;AF=0.346;AN=52;BaseQRankSum=3.919;DP=581;FS=0.000;HRun=0;HaplotypeScore=90.4824;InbreedingCoeff=0.4424;MQ=53.40;MQ0=30;MQRankSum=1.436;QD=8.48;ReadPosRankSum=-0.236;VQSLOD=2.3649;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,11:25:99:164,0,186	0/0:17,1:15:26.54:0,27,250	./.	./.	1/1:24,1:22:14.58:431,15,0	0/0:16,0:15:41.94:0,42,390	0/0:33,0:23:22:0,22,341	1/1:22,0:20:2.02:19,2,0	0/0:21,0:20:53.97:0,54,601	0/0:26,0:24:68.26:0,68,754	0/0:13,0:11:26.96:0,27,276	0/0:17,0:17:45:0,45,546	0/1:21,0:19:36.34:36,0,135	0/0:29,0:29:78.09:0,78,866	0/1:25,0:24:99:362,0,160	0/0:25,0:25:72.13:0,72,899	0/0:27,0:25:69.07:0,69,966	0/0:28,0:28:26.10:0,26,782	1/1:22,0:20:24.39:215,24,0	1/1:16,0:15:16.70:244,17,0	0/1:16,0:14:20.92:21,0,40	1/1:22,1:20:44.83:396,45,0	0/0:20,0:16:34.01:0,34,285	0/0:39,0:38:93.96:0,94,1347	0/0:22,0:21:56.95:0,57,657	0/1:13,0:11:99:105,0,196	1/1:20,0:20:14.88:136,15,0	0/1:7,0:7:45.67:98,0,46
chr10	103908239	.	AAAGG	A	1723.56	PASS	AB=1.000;AC=14;AF=0.259;AN=54;BaseQRankSum=10.357;DP=594;FS=26.352;HRun=0;HaplotypeScore=90.1950;InbreedingCoeff=0.5521;MQ=53.23;MQ0=33;MQRankSum=-1.385;QD=8.75;ReadPosRankSum=-1.502;VQSLOD=0.8216;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:29:79.20:79,0,541	0/0:17,0:14:29.90:0,30,505	./.	0/0:6,0:1:2.99:0,3,23	0/1:25,0:22:14.28:14,0,46	0/0:17,0:16:45.15:0,45,756	0/0:32,0:22:36.83:0,37,529	1/1:6,16:21:45.84:342,46,0	0/0:22,0:21:54.16:0,54,904	0/0:29,0:27:78.05:0,78,1380	0/0:14,0:12:32.94:0,33,553	0/0:18,0:18:42.12:0,42,743	0/1:18,0:16:6.14:6,0,327	0/0:30,0:30:81.23:0,81,1341	0/0:26,0:25:16.34:0,16,276	0/0:24,0:24:69.22:0,69,1276	0/0:26,0:25:69.17:0,69,1295	0/0:31,0:31:86.62:0,87,1450	1/1:4,18:19:53.65:620,54,0	1/1:1,16:16:39.02:512,39,0	1/1:3,12:13:3.01:57,3,0	0/1:23,0:20:8.47:29,0,8	0/0:19,0:15:36.12:0,36,587	0/0:38,0:37:99:0,102,1845	0/0:22,0:21:53.94:0,54,918	0/0:13,0:11:18.44:0,18,261	1/1:1,19:20:15.05:237,15,0	0/0:7,0:7:3.42:0,3,48
chr10	103909013	.	TAC	T	418.55	PASS	AB=0.909;AC=20;AF=0.385;AN=52;BaseQRankSum=3.994;DP=467;FS=9.621;HRun=0;HaplotypeScore=62.1239;InbreedingCoeff=0.1604;MQ=75.27;MQ0=8;MQRankSum=2.449;QD=1.54;ReadPosRankSum=2.903;VQSLOD=0.0392;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:2.40:2,0,195	0/0:4,0:4:6.02:0,6,87	./.	0/0:42,0:26:0:0,0,0	0/1:12,1:13:20.85:21,0,70	1/1:11,4:15:12.97:204,13,0	0/1:20,5:25:12.90:86,0,13	1/1:17,0:17:1.41:3,1,0	0/0:8,0:8:9.01:0,9,107	0/0:16,0:15:18.06:0,18,249	0/1:10,1:11:20.67:21,0,120	0/0:13,0:13:6.02:0,6,87	0/0:9,0:9:6.02:0,6,86	0/0:13,0:13:5.96:0,6,89	0/0:16,0:16:17.70:0,18,163	0/1:8,2:10:20.70:21,0,102	0/1:46,7:53:49.87:50,0,737	0/0:23,0:22:26.35:0,26,436	1/1:10,0:12:7.99:46,8,0	1/1:8,0:14:8.52:42,9,0	1/1:12,0:17:5.68:28,6,0	0/1:9,1:15:23.72:24,0,43	0/0:9,0:8:11.63:0,12,144	0/1:29,2:31:23.36:23,0,447	0/0:7,0:7:5.99:0,6,64	0/0:9,0:15:21.04:0,21,242	1/1:12,0:12:1.25:3,1,0	./.
chr10	103917819	.	A	AC	3045.52	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-0.550;DP=612;FS=2.792;HRun=7;HaplotypeScore=72.7330;InbreedingCoeff=0.9880;MQ=77.48;MQ0=0;MQRankSum=-1.617;QD=17.60;ReadPosRankSum=-2.020;VQSLOD=3.2881;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:87.11:0,87,909	0/0:12,0:12:27.04:0,27,261	0/0:19,0:19:42:0,42,389	0/0:21,0:20:14.89:0,15,187	1/1:3,0:8:14.18:70,14,0	0/0:15,0:15:44.87:0,45,418	0/0:20,0:20:51.08:0,51,492	1/1:6,14:19:36.06:403,36,0	0/0:21,0:21:57.09:0,57,548	0/0:20,0:20:51.08:0,51,491	0/0:17,0:17:41.79:0,42,381	0/0:39,0:39:94.33:0,94,876	0/0:33,0:33:84.11:0,84,806	0/0:26,0:26:69.11:0,69,664	1/1:5,0:27:45.43:226,45,0	0/0:30,0:30:84.13:0,84,811	0/0:33,0:33:87.13:0,87,839	0/0:23,0:23:63.10:0,63,608	1/1:1,14:15:42.10:487,42,0	1/1:3,16:19:45.10:525,45,0	1/1:8,35:43:81.25:978,81,0	1/1:2,0:8:13.54:65,14,0	0/0:11,0:11:29.88:0,30,272	0/0:31,0:31:87.14:0,87,838	0/0:22,0:22:56.84:0,57,550	1/1:5,0:16:24.89:129,25,0	1/1:1,10:11:27:297,27,0	1/1:2,0:6:14.50:84,14,0
chr10	103919311	.	A	AGAGAGG	2993	PASS	AB=0.668;AC=8;AF=0.143;AN=56;BaseQRankSum=0.220;DP=769;FS=0.000;HRun=0;HaplotypeScore=164.3003;InbreedingCoeff=0.6545;MQ=62.97;MQ0=8;MQRankSum=-6.019;QD=29.06;ReadPosRankSum=-3.739;VQSLOD=2.8099;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:75.20:0,75,1424	0/0:10,0:10:15.05:0,15,312	0/0:30,0:19:5.82:0,6,67	0/0:31,0:19:23.91:0,24,380	1/1:9,3:13:6.01:124,6,0	0/0:26,0:26:48.14:0,48,924	0/0:33,0:33:32.12:0,32,944	0/0:35,0:34:36.12:0,36,683	0/0:34,0:33:60.21:0,60,1231	0/0:19,0:19:27.09:0,27,500	0/0:13,0:13:21.07:0,21,419	0/0:39,0:39:72.25:0,72,1496	0/0:27,0:26:57.17:0,57,1144	0/0:22,0:22:45.15:0,45,935	0/1:14,25:39:2.12:1805,0,2	0/0:29,0:28:54.15:0,54,1029	0/0:35,0:35:60.19:0,60,1207	0/0:38,0:38:72.20:0,72,1436	0/0:15,0:15:18.04:0,18,303	0/0:16,0:16:24.08:0,24,499	0/0:63,0:63:99:0,120,2312	1/1:8,7:15:12.04:377,12,0	0/0:16,0:16:18.06:0,18,375	0/0:47,0:47:99:0,102,2063	0/0:25,0:23:45.15:0,45,905	0/1:20,10:30:10.02:781,0,10	0/0:21,0:21:30.07:0,30,587	1/1:4,0:4:3.01:41,3,0
chr10	103931397	.	A	AGAG	56.80	PASS	AB=0.885;AC=6;AF=0.107;AN=56;BaseQRankSum=1.720;DP=317;FS=13.490;HRun=0;HaplotypeScore=61.6970;InbreedingCoeff=-0.0187;MQ=39.00;MQ0=0;MQRankSum=-1.699;QD=0.96;ReadPosRankSum=1.005;VQSLOD=-0.2625;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,3:17:9.03:0,9,109	0/0:8,0:8:12.01:0,12,142	0/0:8,0:4:12.04:0,12,185	0/0:4,0:4:12.04:0,12,221	0/1:3,0:3:0:0,0,0	0/0:8,1:9:2.92:0,3,17	0/0:14,4:18:10.28:0,10,157	0/1:12,1:12:37.67:38,0,479	0/0:11,2:13:10.20:0,10,197	0/0:16,0:16:41.84:0,42,665	0/0:8,0:8:3.01:0,3,55	0/1:9,5:14:10.78:11,0,50	0/0:8,3:11:8.38:0,8,89	0/0:8,4:12:6.01:0,6,78	0/1:9,1:9:0:0,0,0	0/0:6,5:11:6.02:0,6,105	0/0:16,1:17:5.51:0,6,206	0/0:8,0:7:21.02:0,21,346	0/1:8,2:8:52.45:52,0,240	0/0:8,0:8:6.02:0,6,111	0/0:10,4:12:3.01:0,3,56	0/0:7,0:7:9.02:0,9,135	0/0:8,0:8:11.91:0,12,121	0/0:21,3:23:6.46:0,6,90	0/0:22,0:22:20.94:0,21,280	0/0:13,1:13:33.04:0,33,562	0/1:8,1:9:59.07:59,0,192	0/0:1,0:1:3.01:0,3,55
chr10	103931464	.	TAC	T	497.14	PASS	AB=0.880;AC=17;AF=0.315;AN=54;BaseQRankSum=5.830;DP=662;FS=41.842;HRun=0;HaplotypeScore=357.1754;InbreedingCoeff=0.0262;MQ=30.25;MQ0=2;MQRankSum=-1.519;QD=1.53;ReadPosRankSum=1.729;VQSLOD=1.0684;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:3.01:0,3,57	1/1:6,7:13:4.96:20,5,0	0/0:1,0:1:0.89:0,1,2	./.	0/0:26,6:32:8.22:0,8,34	0/0:13,2:15:0.07:0,0,8	1/1:24,4:27:3.76:35,4,0	0/1:15,5:19:99:152,0,256	0/0:19,6:25:7.92:0,8,85	0/1:33,8:39:99:153,0,798	0/0:19,8:27:10.23:0,10,126	0/0:36,2:36:18.84:0,19,210	0/0:20,3:23:9.77:0,10,97	1/1:29,4:33:1.26:22,1,0	0/0:27,4:30:18.77:0,19,173	0/1:25,1:25:6.86:7,0,106	0/0:18,2:19:17.47:0,17,212	0/0:7,0:7:17.27:0,17,221	0/1:20,2:20:96.62:97,0,318	0/1:19,7:25:0.79:1,0,7	1/1:20,3:23:1.11:2,1,0	0/0:36,7:43:8.77:0,9,95	0/0:29,2:31:2.93:0,3,105	0/0:25,2:27:9.03:0,9,168	0/1:30,2:32:11.42:11,0,113	0/1:24,4:28:99:110,0,339	0/1:21,1:21:22.16:22,0,62	0/1:9,2:11:2.96:3,0,176
chr10	103931496	.	A	AG	2751.26	PASS	AB=0.860;AC=18;AF=0.321;AN=56;BaseQRankSum=10.248;DP=1295;FS=9.823;HRun=0;HaplotypeScore=604.3053;InbreedingCoeff=-0.4708;MQ=36.88;MQ0=22;MQRankSum=-7.384;QD=3.09;ReadPosRankSum=-0.348;VQSLOD=0.4522;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,1:41:32.25:0,32,411	0/1:23,2:25:41.12:41,0,374	0/0:21,0:10:17.99:0,18,207	0/0:28,0:12:19.97:0,20,290	0/1:46,19:66:17.28:17,0,486	0/1:28,2:29:14.60:15,0,324	0/0:47,5:51:8.08:0,8,561	0/1:43,8:51:99:265,0,875	0/1:36,6:42:99:206,0,630	0/1:60,13:71:99:471,0,1416	0/0:34,5:39:27.21:0,27,279	0/1:56,6:59:96.90:97,0,618	0/1:35,14:47:99:335,0,559	0/1:61,6:65:99:159,0,589	0/1:52,9:58:99:128,0,662	0/1:32,8:40:99:247,0,447	0/0:40,1:38:30.12:0,30,713	0/1:21,2:23:28.70:29,0,671	0/1:35,3:34:99:118,0,550	0/1:34,6:39:6.32:6,0,254	0/0:60,0:56:67.30:0,67,821	0/1:42,21:63:48.53:49,0,418	0/0:38,9:47:26.63:0,27,307	0/0:48,3:50:26.79:0,27,411	0/1:50,8:58:99:136,0,524	0/1:50,14:60:99:366,0,1273	0/1:26,9:34:99:225,0,496	0/0:21,4:25:42.40:0,42,675
chr10	103931526	.	ATG	A	796.93	PASS	AB=0.827;AC=13;AF=0.232;AN=56;BaseQRankSum=15.092;DP=1079;FS=3.247;HRun=0;HaplotypeScore=480.7078;InbreedingCoeff=-0.3082;MQ=54.19;MQ0=3;MQRankSum=-12.280;QD=1.63;ReadPosRankSum=-0.694;VQSLOD=0.4218;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:25.30:0,25,717	0/1:9,5:14:30.35:30,0,457	0/0:37,0:34:77.14:0,77,1777	0/0:55,1:41:99:0,105,2068	0/0:39,21:60:42.18:0,42,1252	0/0:20,4:23:12.97:0,13,685	0/0:37,2:39:69.53:0,70,1569	0/0:26,2:28:25:0,25,1514	0/1:29,7:36:62.65:63,0,855	0/1:31,5:36:65.82:66,0,1499	0/0:23,8:31:10.06:0,10,750	0/0:41,5:46:31.78:0,32,1349	0/1:33,6:38:81.99:82,0,1163	0/1:46,5:51:14.81:15,0,1549	0/1:48,10:56:64.66:65,0,1405	0/1:23,5:28:99:106,0,741	0/0:36,1:37:56.73:0,57,1639	0/0:18,1:19:0.91:0,1,827	0/1:25,3:27:21.73:22,0,1325	0/1:21,14:35:2.44:2,0,576	0/0:70,0:69:99:0,131,2664	0/1:27,19:46:78.56:79,0,623	0/0:29,11:40:27.65:0,28,765	0/0:41,2:42:59.64:0,60,1215	0/1:32,5:37:54.45:54,0,922	0/1:38,12:49:99:206,0,1944	0/1:23,7:29:99:157,0,890	0/0:23,4:27:55.45:0,55,1191
chr10	103931604	.	CCA	C	3785.44	PASS	AB=0.875;AC=23;AF=0.411;AN=56;BaseQRankSum=11.014;DP=764;FS=2.115;HRun=0;HaplotypeScore=131.8919;InbreedingCoeff=0.5692;MQ=58.91;MQ0=8;MQRankSum=0.813;QD=9.56;ReadPosRankSum=-0.272;VQSLOD=3.5344;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:40:90.30:0,90,1377	0/0:6,0:6:12.04:0,12,190	0/0:40,0:26:24.55:0,25,369	0/1:40,1:28:6.71:7,0,236	1/1:15,0:24:25.57:126,26,0	0/0:25,0:25:51.17:0,51,782	0/0:25,0:25:48.16:0,48,759	1/1:15,17:32:48.05:517,48,0	0/0:25,1:26:18.59:0,19,739	0/0:26,1:27:36.08:0,36,493	0/0:22,0:22:33.09:0,33,487	0/0:28,0:28:60.20:0,60,929	0/1:15,1:16:8.50:9,0,325	0/1:31,3:34:89.98:90,0,711	1/1:14,0:30:49.54:241,50,0	0/1:24,2:26:4.92:5,0,858	0/0:39,0:39:75.23:0,75,1158	0/0:20,1:21:18.65:0,19,759	1/1:13,6:19:0.90:194,1,0	0/1:9,12:21:4.12:350,0,4	1/1:21,35:60:99:1352,104,0	1/1:10,0:20:20.24:100,20,0	0/0:17,0:17:1.64:0,2,354	0/0:36,2:38:13.05:0,13,1114	0/0:14,0:14:33.11:0,33,518	1/1:23,0:33:51.11:251,51,0	1/1:7,16:25:6.38:519,6,0	1/1:7,0:9:1.66:26,2,0
chr10	103934562	.	A	AC	1456.27	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-6.587;DP=433;FS=5.569;HRun=8;HaplotypeScore=54.2448;InbreedingCoeff=0.9390;MQ=81.27;MQ0=0;MQRankSum=0.504;QD=21.42;ReadPosRankSum=1.118;VQSLOD=3.9167;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:56.79:0,57,499	0/0:9,0:9:24.01:0,24,220	0/0:19,0:17:21.02:0,21,244	0/0:14,0:13:3.37:0,3,42	1/1:1,10:11:27.08:312,27,0	0/0:20,0:20:54.03:0,54,493	0/0:26,0:26:62.81:0,63,571	0/0:28,0:28:56.95:0,57,508	0/0:13,0:13:33.02:0,33,301	0/0:11,0:11:24:0,24,219	0/0:13,0:13:36.02:0,36,329	0/0:16,0:16:45.02:0,45,412	0/0:7,0:7:14.99:0,15,132	0/0:17,0:17:41.72:0,42,377	1/1:4,12:16:18.05:208,18,0	0/0:11,0:11:33.02:0,33,301	0/0:22,0:23:55.07:0,55,471	0/0:9,0:9:18:0,18,165	0/0:14,0:14:32.99:0,33,289	0/0:14,0:14:38.84:0,39,334	0/0:18,0:18:45:0,45,407	1/1:0,16:16:30.09:346,30,0	0/0:14,0:14:42.01:0,42,380	0/0:20,0:21:50:0,50,437	0/0:16,0:16:45.02:0,45,411	1/1:1,20:21:57.17:657,57,0	0/0:11,0:11:27.01:0,27,247	1/1:1,3:4:9.03:104,9,0
chr10	103935402	.	G	GCTTCAAAAT	6731.69	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=1.724;DP=600;FS=14.900;HRun=0;HaplotypeScore=174.9140;InbreedingCoeff=0.9901;MQ=76.88;MQ0=0;MQRankSum=-11.550;QD=70.12;ReadPosRankSum=-1.927;VQSLOD=3.6896;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:87.27:0,87,2282	0/0:7,0:7:18.06:0,18,488	0/0:32,0:30:69.22:0,69,1823	0/0:29,0:29:68.68:0,69,1775	1/1:15,14:29:42.99:1559,43,0	0/0:30,0:30:78.25:0,78,2175	0/0:27,0:27:63.19:0,63,1630	0/0:29,0:29:75.02:0,75,1885	0/0:18,0:18:45.15:0,45,1273	0/0:21,0:21:48.16:0,48,1364	0/0:17,0:17:39.12:0,39,1033	0/0:24,0:24:60.19:0,60,1650	0/0:14,0:14:36.11:0,36,987	0/0:16,0:16:45.15:0,45,1260	1/1:6,8:14:24.08:987,24,0	0/0:19,0:19:51.18:0,51,1420	0/0:29,0:29:72.25:0,72,2090	0/0:24,0:24:65.86:0,66,1921	0/0:24,0:24:66.17:0,66,1634	0/0:14,0:14:39.12:0,39,1039	0/0:25,0:25:60.18:0,60,1511	1/1:8,12:20:36.12:1391,36,0	0/0:12,0:12:33.11:0,33,926	0/0:24,0:24:63.14:0,63,1555	0/0:21,0:21:54.19:0,54,1508	1/1:15,12:27:54.17:2276,54,0	0/0:11,0:11:27.08:0,27,711	1/1:3,3:6:12.04:519,12,0
chr10	103938271	.	GA	G	2813.54	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.434;DP=660;FS=13.523;HRun=1;HaplotypeScore=76.1702;InbreedingCoeff=0.9984;MQ=89.24;MQ0=0;MQRankSum=-1.815;QD=29.62;ReadPosRankSum=1.031;VQSLOD=2.1144;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,132,2109	0/0:11,0:11:33.11:0,33,524	0/0:27,0:27:66.21:0,66,1020	0/0:23,0:23:63.18:0,63,906	1/1:2,15:17:36.10:480,36,0	0/0:25,0:25:72.25:0,72,1147	0/0:36,0:36:99:0,105,1649	0/0:25,0:25:75.24:0,75,1156	0/0:20,0:20:60.19:0,60,936	0/0:20,0:20:54.14:0,54,813	0/0:9,0:9:24.08:0,24,380	0/0:26,0:26:78.27:0,78,1246	0/0:29,0:29:84.29:0,84,1336	0/0:23,0:23:69.24:0,69,1100	1/1:3,25:28:72.24:1005,72,0	0/0:30,0:30:90.31:0,90,1427	0/0:31,0:31:93.29:0,93,1460	0/0:17,0:17:51.17:0,51,808	0/0:19,0:19:54.18:0,54,859	0/0:26,0:26:69.22:0,69,1078	0/0:32,0:32:96.33:0,96,1534	1/1:9,18:27:51.12:686,51,0	0/0:30,0:30:69.24:0,69,1095	0/0:22,0:22:63.21:0,63,1004	0/0:13,0:13:30.10:0,30,479	1/1:3,13:16:39.12:524,39,0	0/0:21,0:20:63.17:0,63,950	1/1:0,7:7:21.07:294,21,0
chr10	103938349	.	C	CTGGGCTGT	10965	PASS	AB=0.587;AC=9;AF=0.161;AN=56;BaseQRankSum=11.534;DP=662;FS=3.706;HRun=0;HaplotypeScore=170.6175;InbreedingCoeff=0.8646;MQ=87.14;MQ0=0;MQRankSum=-14.643;QD=92.14;ReadPosRankSum=-0.620;VQSLOD=5.2403;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,3168	0/0:12,0:12:33.11:0,33,930	0/0:27,0:27:72.25:0,72,1890	0/0:25,0:25:54.10:0,54,1242	1/1:11,14:26:45.07:1731,45,0	0/0:21,0:21:63.22:0,63,1776	0/0:28,0:28:84.25:0,84,2246	0/0:16,0:16:45.15:0,45,1291	0/0:25,0:25:72.25:0,72,2066	0/0:25,0:25:75.26:0,75,2153	0/0:13,0:13:36.12:0,36,1033	0/0:23,0:23:69.22:0,69,1889	0/0:22,0:22:66.21:0,66,1809	0/0:26,0:26:78.25:0,78,2177	1/1:9,22:31:72.16:2877,72,0	0/0:22,0:22:66.23:0,66,1832	0/0:25,0:25:72.25:0,72,2002	0/0:22,0:22:60.21:0,60,1688	0/0:26,0:26:78.27:0,78,2200	0/0:25,0:25:72.23:0,72,2006	0/0:32,0:32:90.28:0,90,2492	1/1:7,23:30:75.26:3229,75,0	0/0:23,0:23:57.20:0,57,1595	0/0:24,0:24:69.24:0,69,1965	0/0:25,0:25:72.25:0,72,1928	0/1:8,17:27:19.92:2473,0,20	0/0:18,0:18:54.15:0,54,1411	1/1:3,2:5:15.05:655,15,0
chr10	103940352	.	GGAGGGAGAGAGAGAGA	G	2236.91	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-2.347;DP=468;FS=7.706;HRun=0;HaplotypeScore=178.7417;InbreedingCoeff=0.8510;MQ=70.24;MQ0=17;MQRankSum=-1.524;QD=16.82;ReadPosRankSum=-1.536;VQSLOD=1.9505;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:69.53:0,70,2545	0/0:4,0:4:12.02:0,12,223	0/0:22,0:12:29.84:0,30,301	0/0:31,0:14:21.62:0,22,307	1/1:2,12:14:3.01:117,3,0	0/0:21,0:21:57.07:0,57,1550	0/0:17,0:17:42.06:0,42,1084	1/1:18,0:17:42.04:414,42,0	0/0:20,0:19:45.05:0,45,1526	0/0:20,0:20:48.98:0,49,1272	0/0:15,0:15:26.79:0,27,640	0/0:18,0:18:45.05:0,45,793	0/0:16,0:15:39.02:0,39,1412	0/0:15,0:14:26.79:0,27,1170	1/1:2,14:15:6.02:276,6,0	0/0:10,0:10:24.03:0,24,460	0/0:28,0:28:77.47:0,77,2290	0/0:21,0:20:51.05:0,51,1851	1/1:11,0:10:19.07:216,19,0	1/1:8,0:7:20.92:169,21,0	1/1:21,0:20:38.70:302,39,0	1/1:12,0:12:26.97:227,27,0	0/0:16,0:16:32.90:0,33,919	0/0:17,0:17:42.04:0,42,1285	0/0:14,0:14:39.06:0,39,1496	0/1:18,0:18:99:335,0,200	1/1:11,0:9:26.96:342,27,0	1/1:4,0:3:5.96:44,6,0
chr10	103941853	.	C	CAATG	17659.41	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=16.383;DP=849;FS=10.348;HRun=0;HaplotypeScore=159.5428;InbreedingCoeff=1.0000;MQ=84.74;MQ0=0;MQRankSum=-11.252;QD=62.40;ReadPosRankSum=0.001;VQSLOD=6.1752;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:64:99:0,187,3813	0/0:20,0:20:60.21:0,60,1258	0/0:23,0:23:66.10:0,66,1245	0/0:35,0:35:88.89:0,89,1767	1/1:2,0:28:66.23:1364,66,0	0/0:26,0:25:75.26:0,75,1554	0/0:26,0:26:75.25:0,75,1533	1/1:3,21:26:75.23:2049,75,0	0/0:40,0:40:99:0,120,2477	0/0:39,0:39:99:0,114,2390	0/0:21,0:21:60.20:0,60,1216	0/0:30,0:30:90.31:0,90,1871	0/0:35,0:35:99:0,102,2007	0/0:33,0:33:99:0,99,2039	1/1:6,0:38:59.40:1867,59,0	0/0:38,0:38:99:0,114,2264	0/0:33,0:33:99:0,99,2076	0/0:24,0:24:69.24:0,69,1447	1/1:4,9:14:39.12:1064,39,0	1/1:3,28:36:93.27:2528,93,0	1/1:4,39:48:99:3324,121,0	1/1:4,0:27:63.22:1361,63,0	0/0:21,0:21:57.18:0,57,1144	0/0:32,0:32:96.33:0,96,1995	0/0:26,0:26:78.22:0,78,1526	1/1:6,0:28:78.20:1441,78,0	1/1:1,23:25:69.19:1868,69,0	1/1:0,0:13:39.13:793,39,0
chr10	103942018	.	CTA	C	2857.25	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.198;DP=617;FS=3.639;HRun=0;HaplotypeScore=80.9605;InbreedingCoeff=0.9968;MQ=83.03;MQ0=0;MQRankSum=-2.546;QD=38.10;ReadPosRankSum=1.601;VQSLOD=5.8283;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.28:0,96,1781	0/0:9,0:9:27.09:0,27,510	0/0:13,0:13:34.36:0,34,617	0/0:24,0:24:69.10:0,69,1177	1/1:1,11:12:21.07:321,21,0	0/0:17,0:17:51.17:0,51,985	0/0:33,0:33:93.30:0,93,1754	0/0:24,0:24:66.23:0,66,1276	0/0:35,0:35:99:0,105,2028	0/0:24,0:24:72.25:0,72,1390	0/0:16,0:16:48.16:0,48,927	0/0:30,0:30:90.31:0,90,1729	0/0:23,0:23:69.24:0,69,1333	0/0:37,0:37:99:0,111,2041	1/1:0,24:24:69.23:1057,69,0	0/0:36,0:36:99:0,105,1954	0/0:19,0:19:57.20:0,57,1087	0/0:16,0:16:42.14:0,42,796	0/0:17,0:17:45.15:0,45,868	0/0:11,0:11:33.10:0,33,596	0/0:43,0:43:99:0,129,2420	1/1:0,9:9:21.07:322,21,0	0/0:14,0:14:39.13:0,39,742	0/0:34,0:34:99:0,102,1951	0/0:18,0:18:54.19:0,54,1034	1/1:1,22:23:66.22:1011,66,0	0/0:17,0:17:51.17:0,51,967	1/1:0,7:7:21.07:322,21,0
chr10	103942310	.	T	TTG	1547.28	PASS	AB=0.830;AC=25;AF=0.481;AN=52;BaseQRankSum=1.045;DP=616;FS=9.538;HRun=0;HaplotypeScore=110.5414;InbreedingCoeff=0.3618;MQ=58.39;MQ0=25;MQRankSum=-0.005;QD=4.75;ReadPosRankSum=-0.631;VQSLOD=2.2178;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:45:57.33:0,57,567	0/0:7,0:7:6.02:0,6,66	./.	./.	1/1:23,0:22:3:25,3,0	0/0:19,1:22:32.71:0,33,323	0/1:15,0:15:7.02:7,0,88	1/1:36,0:34:4.52:24,5,0	0/0:12,0:12:26.81:0,27,246	0/0:22,0:21:8.48:0,8,57	0/1:19,1:23:18.11:18,0,195	0/0:12,0:13:26.89:0,27,263	1/1:9,6:15:4.83:211,5,0	0/1:6,5:10:12.96:178,0,13	1/1:14,0:13:8.56:47,9,0	0/0:8,0:7:14.91:0,15,146	0/0:39,0:40:41.04:0,41,536	0/0:31,0:33:38.77:0,39,519	0/1:22,0:20:8.22:120,0,8	1/1:7,10:17:12.04:179,12,0	0/1:36,6:41:5.45:352,0,5	1/1:10,0:9:5.93:42,6,0	0/1:8,0:22:5.05:35,0,5	1/1:4,1:14:14.82:149,15,0	0/0:18,0:19:12.45:0,12,103	1/1:29,0:28:8.75:114,9,0	0/1:10,8:18:52.86:200,0,53	1/1:11,0:9:3.91:23,4,0
chr10	103942337	.	T	TGC	522.69	PASS	AB=0.968;AC=12;AF=0.214;AN=56;BaseQRankSum=8.603;DP=610;FS=12.571;HRun=0;HaplotypeScore=107.6841;InbreedingCoeff=-0.0795;MQ=53.19;MQ0=25;MQRankSum=1.413;QD=2.55;ReadPosRankSum=3.468;VQSLOD=1.4170;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,117,1286	0/0:4,0:4:9.02:0,9,116	0/0:30,0:5:8.16:0,8,108	0/0:41,0:15:20.92:0,21,222	0/1:11,9:20:25.79:26,0,91	0/0:26,0:26:74.85:0,75,787	0/0:16,0:16:31.55:0,32,331	0/0:37,0:36:99:0,102,860	0/0:16,0:15:33.81:0,34,446	0/0:14,0:13:32.91:0,33,324	0/0:20,0:20:31.11:0,31,497	0/0:12,0:12:36.06:0,36,460	0/1:12,0:11:55.64:74,0,56	0/1:12,0:11:61.97:62,0,120	1/1:11,0:10:11.02:103,11,0	0/0:6,0:5:15.05:0,15,221	0/0:40,0:40:99:0,114,1257	0/0:36,0:36:91.01:0,91,1054	0/0:15,0:14:14.40:0,14,229	0/1:17,0:17:52.58:53,0,97	0/1:51,0:49:45.34:45,0,590	0/1:12,0:11:12.22:12,0,60	0/0:21,0:21:11.05:0,11,105	0/1:19,0:18:6.64:7,0,83	0/0:19,0:17:41.94:0,42,380	0/1:19,0:18:99:163,0,134	0/1:20,0:19:59.02:59,0,230	0/1:11,0:10:42.05:72,0,42
chr10	103943244	.	CCT	C	7368.06	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=17.460;DP=586;FS=1.491;HRun=0;HaplotypeScore=102.9187;InbreedingCoeff=0.9940;MQ=84.63;MQ0=0;MQRankSum=-4.531;QD=36.84;ReadPosRankSum=1.005;VQSLOD=6.5396;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,2141	0/0:6,0:6:18.04:0,18,304	0/0:27,0:27:63.41:0,63,1293	0/0:15,0:15:42.04:0,42,653	1/1:1,15:16:27.09:429,27,0	0/0:12,0:12:36.09:0,36,658	0/0:21,0:21:63.20:0,63,1231	1/1:1,18:19:35.56:405,36,0	0/0:15,0:15:45.15:0,45,900	0/0:19,0:19:54.19:0,54,1092	0/0:20,0:20:57.18:0,57,1106	0/0:25,0:25:72.25:0,72,1443	0/0:17,0:17:51.16:0,51,1000	0/0:19,0:19:57.17:0,57,1052	1/1:0,28:28:78.27:1233,78,0	0/0:26,0:26:78.26:0,78,1548	0/0:33,0:33:99:0,99,1960	0/0:35,0:35:99:0,105,1965	1/1:0,21:21:56.85:739,57,0	1/1:0,14:14:39.09:589,39,0	1/1:1,39:40:84.22:1334,84,0	1/1:0,20:20:54.18:857,54,0	0/0:18,0:18:51.10:0,51,925	0/0:31,0:31:90.31:0,90,1809	0/0:11,0:11:33.11:0,33,658	1/1:0,20:20:51.16:786,51,0	1/1:0,18:18:51.17:806,51,0	1/1:0,4:4:12.04:190,12,0
chr10	103943884	.	GA	G	454.64	PASS	AB=0.788;AC=4;AF=0.071;AN=56;BaseQRankSum=7.871;DP=504;FS=23.409;HRun=3;HaplotypeScore=79.9130;InbreedingCoeff=-0.0794;MQ=58.87;MQ0=9;MQRankSum=-5.943;QD=6.79;ReadPosRankSum=-1.969;VQSLOD=-0.7453;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.65:0,76,1020	0/0:4,0:4:9:0,9,108	0/0:22,1:11:32.84:0,33,423	0/0:34,1:21:38.20:0,38,549	0/1:11,2:13:95.84:96,0,220	0/0:15,0:15:45.14:0,45,631	0/0:21,0:21:63.15:0,63,862	0/0:24,0:22:48.54:0,49,582	0/0:20,0:20:53.21:0,53,737	0/0:13,0:13:33.11:0,33,474	0/0:15,0:15:45.13:0,45,610	0/0:17,0:17:51.14:0,51,693	0/0:12,0:12:27.09:0,27,387	0/0:16,0:16:45.13:0,45,609	0/0:13,0:13:18.01:0,18,232	0/0:18,0:18:54.11:0,54,718	0/0:26,0:26:78.25:0,78,1095	0/0:19,0:19:54.18:0,54,768	0/0:20,0:18:40.35:0,40,334	0/0:21,0:21:40.25:0,40,349	0/0:12,0:12:18.25:0,18,174	0/1:19,10:29:99:304,0,636	0/0:14,0:14:42.13:0,42,584	0/0:24,0:24:55.44:0,55,831	0/0:13,0:13:36.12:0,36,516	0/1:14,5:19:99:103,0,508	0/0:14,0:14:25.72:0,26,284	0/1:4,2:4:29.07:61,0,29
chr10	103943885	.	AAAGG	A	1846.49	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=3.374;DP=512;FS=8.539;HRun=0;HaplotypeScore=106.1415;InbreedingCoeff=0.9027;MQ=58.48;MQ0=10;MQRankSum=-1.801;QD=20.07;ReadPosRankSum=-0.059;VQSLOD=2.7459;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:48.76:0,49,1093	0/0:3,0:3:6.01:0,6,97	0/0:24,0:11:12.01:0,12,236	0/0:37,0:21:9.03:0,9,213	0/0:12,0:12:24.04:0,24,254	0/0:15,0:15:39.13:0,39,889	0/0:21,0:21:39.13:0,39,911	1/1:21,3:22:18.06:276,18,0	0/0:21,0:21:42.14:0,42,910	0/0:12,0:12:24.08:0,24,572	0/0:15,0:15:30.10:0,30,684	0/0:18,0:18:36.12:0,36,745	0/0:12,0:12:21.07:0,21,413	0/0:16,0:16:21.07:0,21,510	0/0:6,0:15:3.01:0,3,41	0/0:18,0:18:36.12:0,36,785	0/0:26,0:26:48.15:0,48,1098	0/0:19,0:19:30.10:0,30,681	1/1:11,9:18:36.06:525,36,0	1/1:5,17:22:42.14:646,42,0	1/1:9,3:12:15.03:218,15,0	0/0:31,0:31:64.56:0,65,674	0/0:15,0:15:33.11:0,33,717	0/0:24,0:24:51.54:0,52,962	0/0:12,0:12:24.07:0,24,534	0/0:20,0:20:38.45:0,38,395	1/1:10,4:14:24.06:352,24,0	0/0:6,0:4:11.97:0,12,118
chr10	103943914	.	AG	A	608.02	PASS	AB=0.838;AC=5;AF=0.089;AN=56;BaseQRankSum=6.261;DP=599;FS=5.811;HRun=2;HaplotypeScore=112.9431;InbreedingCoeff=-0.0988;MQ=46.59;MQ0=20;MQRankSum=-4.606;QD=5.90;ReadPosRankSum=1.278;VQSLOD=0.7573;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:34.32:0,34,1048	0/0:2,0:2:3.01:0,3,48	0/0:53,1:8:23.43:0,23,323	0/0:70,1:18:41.34:0,41,598	0/1:11,5:17:99:194,0,169	0/0:17,0:17:48.16:0,48,739	0/0:19,0:19:51.10:0,51,786	0/0:31,0:28:65.12:0,65,822	0/0:18,0:18:45.14:0,45,704	0/0:17,0:17:48.16:0,48,744	0/0:14,0:14:42.12:0,42,623	0/0:17,1:18:15.82:0,16,699	0/0:10,0:10:24.06:0,24,358	0/0:12,0:12:36.11:0,36,539	0/1:19,0:19:2.41:2,0,212	0/0:21,0:21:60.15:0,60,838	0/0:20,0:20:57.18:0,57,875	0/0:21,0:21:60.15:0,60,848	0/0:26,0:24:60.52:0,61,657	0/0:24,0:24:54.33:0,54,531	0/0:13,0:13:15.95:0,16,157	0/1:24,5:32:99:284,0,747	0/0:15,0:15:39.08:0,39,543	0/0:21,0:21:50.37:0,50,771	0/0:10,0:10:27.09:0,27,428	0/1:14,3:20:99:192,0,422	0/0:12,0:12:21.45:0,21,157	0/1:13,2:14:46.11:46,0,181
chr10	103943936	.	GGA	G	204.76	PASS	AB=0.953;AC=13;AF=0.241;AN=54;BaseQRankSum=0.891;DP=575;FS=3.590;HRun=0;HaplotypeScore=119.9294;InbreedingCoeff=-0.1098;MQ=44.80;MQ0=19;MQRankSum=-0.436;QD=0.89;ReadPosRankSum=0.436;VQSLOD=2.2284;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,1:25:22.66:23,0,188	0/0:4,0:4:6.02:0,6,74	./.	0/0:59,0:12:0:0,0,0	0/0:18,0:19:7.04:0,7,32	0/0:17,0:17:6.82:0,7,45	0/0:14,0:14:12.04:0,12,158	0/0:29,0:27:2.97:0,3,20	0/1:14,0:15:2.08:2,0,121	0/1:22,0:22:7.81:8,0,165	0/0:10,0:10:9.03:0,9,127	0/1:16,0:17:11.73:12,0,247	0/0:13,1:14:2.99:0,3,123	0/0:13,0:12:15.51:0,16,204	0/0:17,0:19:18.22:0,18,151	0/0:24,0:25:14.22:0,14,497	0/0:18,0:20:12.03:0,12,154	0/1:15,3:18:70.73:71,0,173	0/1:24,0:23:6.44:7,0,6	0/1:16,1:17:26.59:27,0,38	0/0:17,0:17:5.76:0,6,77	1/1:28,1:29:11.26:94,11,0	0/1:11,0:11:35.23:35,0,57	0/1:24,1:25:2.59:3,0,340	0/1:15,0:14:16.22:16,0,76	0/0:23,0:23:23.71:0,24,212	0/1:9,2:11:47.13:47,0,112	0/0:16,0:16:18.94:0,19,114
chr10	103944050	.	G	GA	2368.23	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-9.051;DP=549;FS=1.461;HRun=9;HaplotypeScore=63.7772;InbreedingCoeff=0.8641;MQ=75.90;MQ0=0;MQRankSum=-1.195;QD=20.07;ReadPosRankSum=-0.567;VQSLOD=3.9925;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:77.98:0,78,674	0/0:7,0:7:17.98:0,18,153	0/0:34,0:29:34.41:0,34,325	0/0:28,0:19:2.92:0,3,194	0/0:26,0:26:65.85:0,66,562	0/0:19,0:19:53.89:0,54,454	0/0:22,0:22:59.92:0,60,507	1/1:8,17:25:53.93:551,54,0	0/0:26,0:26:56.96:0,57,493	0/0:21,0:21:56.92:0,57,485	0/0:7,0:7:17.99:0,18,156	0/0:23,0:23:65.97:0,66,570	0/0:13,0:13:32.99:0,33,286	0/0:15,0:15:41.95:0,42,358	0/0:20,0:20:59.99:0,60,520	0/0:19,0:19:53.97:0,54,465	0/0:28,0:28:65.06:0,65,638	0/0:16,1:17:14.49:0,14,342	1/1:5,10:15:30.07:322,30,0	1/1:0,13:13:36.06:384,36,0	1/1:3,24:27:57.15:631,57,0	0/0:17,0:17:41.99:0,42,364	0/0:16,0:16:38.99:0,39,339	0/0:10,0:10:20.99:0,21,182	0/0:14,0:14:32.99:0,33,286	0/0:22,0:22:53.97:0,54,469	1/1:7,21:28:60.13:651,60,0	0/1:10,0:10:6.13:6,0,181
chr10	103944305	.	G	GAC	245.83	PASS	AB=0.914;AC=9;AF=0.196;AN=46;BaseQRankSum=-0.528;DP=587;FS=1.077;HRun=0;HaplotypeScore=103.0832;InbreedingCoeff=-0.0348;MQ=56.97;MQ0=5;MQRankSum=-1.216;QD=1.55;ReadPosRankSum=-0.823;VQSLOD=2.0834;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:40:10.90:11,0,84	0/0:6,0:7:2.03:0,2,6	./.	./.	0/1:15,0:14:26.03:36,0,26	0/0:13,0:13:5.81:0,6,45	0/0:21,0:22:14.49:0,14,136	./.	0/0:18,0:19:20.26:0,20,199	0/0:16,0:17:5.28:0,5,49	0/1:11,2:12:29.06:29,0,102	0/1:18,0:18:29.31:29,0,85	0/0:16,0:16:8.85:0,9,79	0/1:17,2:19:26.07:26,0,142	0/1:19,5:24:2.58:79,0,3	0/0:24,0:24:11.61:0,12,113	0/0:33,0:33:25.30:0,25,259	0/0:21,0:21:20.42:0,20,269	./.	0/0:12,0:15:5.68:0,6,28	./.	0/0:17,0:19:5.64:0,6,27	0/0:10,0:10:3.01:0,3,32	0/0:33,0:36:32.60:0,33,290	0/0:20,0:24:14.92:0,15,173	1/1:14,0:14:4.26:45,4,0	0/0:21,0:28:7.65:0,8,61	0/1:12,4:16:49.17:116,0,49
chr10	103945608	.	A	ACATTTATTCATT	8583.10	PASS	AB=0.783;AC=10;AF=0.179;AN=56;BaseQRankSum=-2.870;DP=702;FS=18.753;HRun=0;HaplotypeScore=220.8019;InbreedingCoeff=0.7528;MQ=72.64;MQ0=0;MQRankSum=-6.447;QD=61.75;ReadPosRankSum=-3.737;VQSLOD=2.6254;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.30:0,87,2984	0/0:17,0:17:48.11:0,48,1515	0/0:18,0:17:36.11:0,36,1017	0/0:26,0:23:60.15:0,60,1122	1/1:2,21:28:51.02:1880,51,0	0/0:18,0:18:54.17:0,54,1739	0/0:24,0:24:54.14:0,54,1602	0/0:34,0:34:99:0,99,2048	0/0:36,0:36:99:0,108,3429	0/0:36,0:36:99:0,102,3233	0/0:15,0:15:42.03:0,42,992	0/0:29,0:29:87.23:0,87,2580	0/0:31,0:31:93.25:0,93,2861	0/0:36,0:36:99:0,102,3189	1/1:13,5:15:39.07:1452,39,0	0/0:24,0:24:72.22:0,72,2462	0/1:28,0:28:22.06:22,0,2120	0/0:17,0:17:48.11:0,48,1530	0/0:22,0:22:66.18:0,66,2012	0/0:22,0:22:57.12:0,57,1514	0/0:27,0:27:78.08:0,78,2015	1/1:3,17:23:38.99:1674,39,0	0/0:16,0:16:48.15:0,48,1568	0/0:24,0:24:60.17:0,60,1804	0/0:32,0:32:90.28:0,90,3057	0/1:7,21:28:99:2687,0,200	0/0:29,0:29:63.29:0,63,2967	1/1:3,7:12:15.05:867,15,0
chr10	103945722	.	A	ATTCATTCG	5154.60	PASS	AB=0.882;AC=9;AF=0.161;AN=56;BaseQRankSum=1.312;DP=810;FS=0.000;HRun=0;HaplotypeScore=176.7006;InbreedingCoeff=0.8264;MQ=56.62;MQ0=14;MQRankSum=-6.899;QD=44.44;ReadPosRankSum=0.627;VQSLOD=4.1633;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,138,3041	0/0:16,0:16:42.09:0,42,1025	0/0:22,0:4:11.81:0,12,200	0/0:25,0:8:8.25:0,8,224	1/1:17,3:18:42.14:1165,42,0	0/0:34,0:34:99:0,99,1983	0/0:20,0:20:54.12:0,54,1179	0/0:34,0:33:93.20:0,93,1853	0/0:35,0:35:93.23:0,93,2264	0/0:38,0:38:96.24:0,96,2233	0/0:28,0:27:75.02:0,75,1829	0/0:44,0:44:99:0,120,2653	0/0:31,0:31:84.22:0,84,1908	0/0:33,0:33:96.19:0,96,2066	1/1:3,27:29:18.06:764,18,0	0/0:35,0:35:99:0,102,2198	0/0:24,0:24:72.13:0,72,1507	0/0:23,0:22:40.03:0,40,1436	0/0:17,0:16:38.97:0,39,718	0/0:39,0:39:99:0,100,2262	0/0:28,0:28:81.23:0,81,1987	1/1:12,5:16:48.06:1228,48,0	0/0:26,0:26:72.05:0,72,1705	0/0:33,0:33:96.16:0,96,2073	0/0:24,0:24:66.03:0,66,1425	0/1:26,4:24:99:1602,0,100	0/0:35,0:35:92.32:0,92,2214	1/1:4,11:14:9.03:396,9,0
chr10	103945762	.	A	ATT	596.57	PASS	AB=0.728;AC=5;AF=0.089;AN=56;BaseQRankSum=8.222;DP=740;FS=1.613;HRun=0;HaplotypeScore=92.6934;InbreedingCoeff=0.1888;MQ=55.94;MQ0=17;MQRankSum=-3.598;QD=7.28;ReadPosRankSum=-0.300;VQSLOD=3.2250;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1759	0/0:11,0:11:33.10:0,33,510	0/0:17,0:4:9.03:0,9,147	0/0:14,0:3:9.03:0,9,119	0/1:11,8:15:99:161,0,264	0/0:32,0:32:96.24:0,96,1509	0/0:21,0:21:63.20:0,63,996	0/0:41,0:41:99:0,120,1911	0/0:37,0:37:99:0,105,1608	0/0:38,0:38:99:0,108,1712	0/0:22,0:22:60.19:0,60,948	0/0:36,0:36:99:0,108,1698	0/0:33,0:33:96.33:0,96,1560	0/0:34,0:34:99:0,99,1582	1/1:14,1:12:3.48:41,3,0	0/0:36,0:36:99:0,105,1606	0/0:21,0:21:57.19:0,57,928	0/0:21,0:20:62.99:0,63,941	0/0:16,0:15:45.09:0,45,703	0/0:38,0:38:99:0,111,1784	0/0:28,0:28:81.18:0,81,1258	0/1:15,7:14:99:198,0,205	0/0:28,0:28:75.26:0,75,1211	0/0:30,0:30:90.26:0,90,1412	0/0:26,0:26:78.20:0,78,1195	0/1:16,10:18:99:309,0,308	0/0:28,0:28:84.20:0,84,1263	0/0:10,0:7:2.97:0,3,20
chr10	103945763	.	C	CAT	596.13	PASS	AB=0.732;AC=5;AF=0.093;AN=54;BaseQRankSum=8.111;DP=739;FS=1.626;HRun=0;HaplotypeScore=92.0145;InbreedingCoeff=0.1985;MQ=55.97;MQ0=17;MQRankSum=-2.642;QD=7.18;ReadPosRankSum=1.180;VQSLOD=3.4323;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1751	0/0:11,0:11:33.10:0,33,513	0/0:16,0:4:8.41:0,8,146	0/0:12,0:3:9.03:0,9,120	0/1:12,8:14:99:161,0,255	0/0:33,0:33:96.28:0,96,1532	0/0:21,0:21:63.20:0,63,998	0/0:41,0:41:99:0,120,1884	0/0:36,0:36:99:0,108,1608	0/0:37,0:37:99:0,108,1698	0/0:21,0:21:57.19:0,57,926	0/0:36,0:36:99:0,108,1708	0/0:34,0:34:99:0,99,1582	0/0:34,0:34:99:0,99,1606	1/1:14,1:12:2.98:39,3,0	0/0:36,0:36:99:0,108,1651	0/0:21,0:21:60.19:0,60,948	0/0:21,0:20:63.10:0,63,944	0/0:17,0:16:45.08:0,45,678	0/0:38,0:38:99:0,111,1804	0/0:29,0:29:84.20:0,84,1282	0/1:15,7:14:99:196,0,206	0/0:28,0:28:78.23:0,78,1218	0/0:30,0:30:87.28:0,87,1389	0/0:25,0:25:75.25:0,75,1196	0/1:16,10:18:99:312,0,290	0/0:28,0:28:84.21:0,84,1265	./.
chr10	103946183	.	TGGCTC	T	334.38	PASS	AB=0.928;AC=9;AF=0.167;AN=54;BaseQRankSum=2.306;DP=398;FS=14.902;HRun=0;HaplotypeScore=59.6690;InbreedingCoeff=-0.2085;MQ=37.19;MQ0=86;MQRankSum=-1.691;QD=2.24;ReadPosRankSum=-2.890;VQSLOD=-0.3966;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:25:20.15:0,20,646	0/0:3,0:1:3.01:0,3,74	./.	0/0:10,0:1:2.99:0,3,24	0/0:16,0:9:20.74:0,21,422	0/0:11,0:8:14.07:0,14,299	0/1:17,0:13:28.08:28,0,440	0/1:21,10:28:99:199,0,1121	0/0:12,0:9:27.09:0,27,705	0/0:11,0:8:20.72:0,21,460	0/0:14,0:13:8.13:0,8,644	0/0:13,0:12:13.06:0,13,522	0/0:10,0:8:13.27:0,13,258	0/0:13,0:13:35.91:0,36,805	0/1:15,3:14:1.58:2,0,542	0/0:13,0:10:27.09:0,27,697	0/0:12,0:11:16.33:0,16,190	0/0:19,0:14:34.21:0,34,738	0/1:13,1:10:48.56:49,0,587	0/0:13,5:15:30.10:0,30,743	0/1:8,0:5:43.01:43,0,293	0/0:6,0:3:6.02:0,6,119	0/0:13,0:8:16.23:0,16,412	0/1:15,1:14:99:113,0,207	0/0:11,0:11:25.26:0,25,574	0/1:9,0:8:3.15:3,0,385	0/1:19,1:17:15.99:16,0,1035	0/1:14,0:5:9.11:9,0,264
chr10	103948433	.	GTT	G	2322.11	PASS	AB=0.830;AC=12;AF=0.214;AN=56;BaseQRankSum=9.110;DP=636;FS=4.740;HRun=10;HaplotypeScore=104.5393;InbreedingCoeff=0.7639;MQ=50.92;MQ0=46;MQRankSum=-8.716;QD=11.61;ReadPosRankSum=0.948;VQSLOD=1.8477;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:90.31:0,90,1424	0/0:5,0:5:15.05:0,15,236	0/1:65,0:10:2.75:3,0,86	0/0:76,0:10:17.77:0,18,201	1/1:2,21:23:55.34:600,55,0	0/0:14,0:14:30.10:0,30,467	0/0:15,0:15:39.13:0,39,619	0/0:8,0:28:53.39:0,53,217	0/0:11,0:12:26.59:0,27,299	0/0:32,0:29:78.27:0,78,1219	0/0:16,0:16:45.15:0,45,688	0/0:10,0:10:24.08:0,24,362	0/0:9,0:9:21.06:0,21,313	0/0:13,0:13:33.11:0,33,522	1/1:6,10:16:24.12:413,24,0	0/0:6,0:6:18.06:0,18,286	0/0:25,0:26:69.20:0,69,1021	0/0:27,0:29:83.76:0,84,1273	0/1:14,3:25:20.54:21,0,163	0/0:3,1:22:37.28:0,37,158	0/0:8,0:8:11.89:0,12,41	1/1:3,13:17:25.60:407,26,0	0/0:19,0:19:51.17:0,51,795	0/0:23,0:23:57.19:0,57,886	0/0:19,0:20:53.66:0,54,791	1/1:6,22:28:3.16:640,3,0	0/0:5,0:15:25.19:0,25,92	1/1:1,13:16:15.36:408,15,0
chr10	103948447	.	TTTG	T	657.84	PASS	AB=0.980;AC=12;AF=0.214;AN=56;BaseQRankSum=10.831;DP=666;FS=6.537;HRun=0;HaplotypeScore=132.3652;InbreedingCoeff=0.0278;MQ=48.10;MQ0=47;MQRankSum=-10.649;QD=2.19;ReadPosRankSum=-1.544;VQSLOD=1.9728;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:90.48:0,90,2034	0/0:5,0:5:15.05:0,15,301	0/0:59,0:10:8.44:0,8,249	0/1:72,0:9:13.84:14,0,162	0/1:29,0:28:0.62:189,0,1	0/0:12,0:12:33.09:0,33,628	0/0:16,0:16:48.11:0,48,852	0/1:26,0:25:31.10:31,0,361	0/0:13,0:13:32.54:0,33,543	0/0:30,0:26:78.04:0,78,1274	0/0:20,0:20:52.40:0,52,947	0/0:15,0:15:32.06:0,32,532	0/0:10,0:10:24.04:0,24,393	0/0:16,0:16:45.13:0,45,768	0/1:19,0:18:0.47:96,0,0	0/0:8,0:8:24.08:0,24,455	0/0:25,0:25:75.09:0,75,1367	0/0:32,0:32:90.12:0,90,1553	0/1:31,2:27:45.98:46,0,282	0/1:22,2:24:21.31:21,0,280	0/1:8,0:6:17.75:18,0,49	1/1:21,0:21:2.30:90,2,0	0/0:18,0:18:54.06:0,54,948	0/0:26,0:26:48.24:0,48,1008	0/0:23,0:23:55.21:0,55,1141	0/1:36,0:32:78.61:227,0,79	0/1:14,1:14:20.03:20,0,216	0/1:16,0:16:54.38:54,0,75
chr10	103948450	.	G	GTTT	6047.59	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=13.870;DP=655;FS=0.757;HRun=9;HaplotypeScore=119.8956;InbreedingCoeff=0.8942;MQ=48.93;MQ0=43;MQRankSum=-12.863;QD=17.43;ReadPosRankSum=0.391;VQSLOD=2.3281;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:81:0,81,1188	0/0:5,0:5:15.05:0,15,189	0/1:57,0:12:5.13:5,0,128	0/1:68,0:9:0.43:0,0,75	1/1:27,2:28:66.16:938,66,0	0/0:10,0:10:30.09:0,30,374	0/0:16,0:16:42.11:0,42,515	1/1:21,1:21:43.69:512,44,0	0/0:12,0:12:31.87:0,32,346	0/0:30,0:27:62.87:0,63,719	0/0:22,0:22:53.65:0,54,570	0/0:15,0:15:26.33:0,26,312	0/0:10,0:10:20.74:0,21,218	0/0:17,0:17:38.96:0,39,442	1/1:19,0:18:48.42:608,48,0	0/0:9,0:9:27.07:0,27,313	0/0:26,0:26:72.19:0,72,885	0/0:31,0:31:75.06:0,75,880	1/1:30,2:27:61.43:799,61,0	1/1:22,1:23:49.92:685,50,0	1/1:7,1:6:12.04:195,12,0	1/1:18,2:21:41.80:567,42,0	0/0:18,0:18:42.09:0,42,525	0/0:25,0:25:43.07:0,43,570	0/0:24,0:24:56.05:0,56,627	1/1:32,0:31:40.97:934,41,0	1/1:14,0:13:32.52:359,33,0	1/1:16,0:16:33.10:445,33,0
chr10	103948454	.	T	TTTG	5646.33	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=13.529;DP=638;FS=1.650;HRun=0;HaplotypeScore=120.2043;InbreedingCoeff=0.6407;MQ=50.58;MQ0=31;MQRankSum=-11.671;QD=26.02;ReadPosRankSum=3.099;VQSLOD=4.8559;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:99:0,110,1713	0/0:6,0:6:15.05:0,15,249	0/0:46,0:13:13.46:0,13,235	0/0:63,0:9:11.80:0,12,134	1/1:11,19:29:68.42:1235,68,0	0/0:11,0:11:33.10:0,33,520	0/0:16,0:16:45.14:0,45,719	0/1:21,0:20:30.56:167,0,31	0/0:13,0:13:39.05:0,39,556	0/0:27,0:24:69.17:0,69,1046	0/0:23,0:23:60.17:0,60,905	0/0:14,0:14:27.70:0,28,441	0/0:10,0:10:24.07:0,24,342	0/0:20,0:20:51.10:0,51,732	1/1:9,10:18:43.79:830,44,0	0/0:10,0:10:30.09:0,30,470	0/0:27,0:27:75.23:0,75,1211	0/0:31,0:31:84.18:0,84,1270	0/1:32,0:27:23.07:269,0,23	0/1:24,0:24:31.66:273,0,32	0/1:8,0:6:4.95:95,0,5	1/1:11,10:21:45.32:758,45,0	0/0:17,0:17:45.14:0,45,721	0/0:24,0:24:48.31:0,48,863	0/0:24,0:24:66.07:0,66,990	1/1:15,20:31:27.32:1304,27,0	1/1:14,0:13:5.15:105,5,0	1/1:3,10:13:31.91:611,32,0
chr10	103948460	.	G	GT	1626.75	PASS	AB=0.971;AC=22;AF=0.393;AN=56;BaseQRankSum=12.397;DP=620;FS=7.171;HRun=12;HaplotypeScore=111.9083;InbreedingCoeff=0.5486;MQ=52.63;MQ0=20;MQRankSum=-8.339;QD=4.93;ReadPosRankSum=0.340;VQSLOD=1.9420;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:70.85:0,71,510	0/0:6,0:6:11.88:0,12,87	0/0:40,0:14:3.01:0,3,79	0/1:53,0:9:4.78:5,0,15	1/1:17,12:28:17.88:353,18,0	0/0:12,1:13:3.59:0,4,187	0/0:17,0:17:40.80:0,41,290	0/1:23,0:22:4.93:25,0,5	0/0:15,0:15:26.49:0,26,190	0/0:23,0:22:34.69:0,35,246	0/1:19,0:20:0.43:0,0,162	0/1:11,3:14:11.47:11,0,91	0/0:10,0:10:14.88:0,15,109	0/0:18,0:18:29.73:0,30,218	1/1:11,1:16:25.95:137,26,0	0/0:13,0:13:20.76:0,21,151	0/0:27,0:28:70.57:0,71,505	0/0:30,0:30:56.39:0,56,411	0/1:29,0:29:12.70:88,0,13	1/1:19,0:22:12.33:104,12,0	1/1:8,0:6:6.40:27,6,0	1/1:11,9:20:39.51:363,40,0	0/0:13,0:15:22.83:0,23,159	0/0:21,4:25:9.31:0,9,231	0/1:26,0:26:57.27:57,0,191	1/1:25,9:32:20.29:351,20,0	1/1:12,0:12:16.65:89,17,0	1/1:11,4:15:27.72:210,28,0
chr10	103948461	.	T	TTG	2125.03	PASS	AB=0.906;AC=19;AF=0.339;AN=56;BaseQRankSum=13.582;DP=622;FS=3.286;HRun=0;HaplotypeScore=120.2399;InbreedingCoeff=0.7170;MQ=52.82;MQ0=18;MQRankSum=-11.505;QD=7.78;ReadPosRankSum=2.649;VQSLOD=3.3861;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:96.24:0,96,1270	0/0:6,0:6:18.04:0,18,235	0/0:38,0:14:17.08:0,17,215	0/1:54,0:8:0.46:0,0,50	1/1:29,0:28:4.62:148,5,0	0/0:13,0:13:38.84:0,39,503	0/0:18,0:18:49.68:0,50,671	1/1:19,3:23:13.91:324,14,0	0/0:15,0:15:44.84:0,45,495	0/0:24,0:22:66.05:0,66,772	0/0:20,0:20:50.97:0,51,585	0/0:14,0:14:29.97:0,30,316	0/0:11,0:11:24:0,24,297	0/0:18,0:18:51.03:0,51,625	1/1:17,0:16:16.68:178,17,0	0/0:14,0:14:39.05:0,39,471	0/0:28,0:28:84.21:0,84,1154	0/0:30,0:30:87.06:0,87,1092	0/1:20,11:29:11.76:373,0,12	1/1:15,6:22:9.25:443,9,0	1/1:4,4:6:12.02:156,12,0	1/1:20,0:20:2.49:128,2,0	0/0:15,0:15:42.02:0,42,487	0/0:24,0:24:55.60:0,56,660	0/0:26,0:26:68.17:0,68,732	0/1:36,0:33:89.22:194,0,89	1/1:8,4:14:11.14:229,11,0	1/1:15,0:15:20.79:144,21,0
chr10	103950978	.	G	GTTGC	2323.61	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=8.843;DP=490;FS=10.705;HRun=0;HaplotypeScore=80.1614;InbreedingCoeff=0.9498;MQ=52.60;MQ0=24;MQRankSum=-8.831;QD=51.64;ReadPosRankSum=-0.619;VQSLOD=3.9201;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:75.17:0,75,1372	0/0:11,0:11:33.11:0,33,642	./.	0/0:12,0:3:9.01:0,9,121	1/1:1,8:11:21.07:537,21,0	0/0:19,0:18:54.11:0,54,956	0/0:29,0:25:72.11:0,72,1272	0/0:27,0:26:78.06:0,78,1347	0/0:10,0:9:27.08:0,27,503	0/0:15,0:14:39.12:0,39,742	0/0:7,0:6:18.06:0,18,359	0/0:18,0:18:51.18:0,51,1018	0/0:16,0:16:45.14:0,45,863	0/0:18,0:18:54.19:0,54,1077	1/1:0,5:9:12.04:333,12,0	0/0:16,0:14:39.13:0,39,778	0/0:35,0:35:96.28:0,96,1823	0/0:22,0:21:54.16:0,54,1018	0/0:23,0:22:60.13:0,60,1119	0/0:30,0:30:90.30:0,90,1760	0/0:32,0:31:75.26:0,75,1476	1/1:0,11:14:33.11:868,33,0	0/0:17,0:17:48.16:0,48,924	0/0:16,0:14:39.13:0,39,778	0/0:16,0:16:48.11:0,48,850	1/1:0,7:8:21.07:584,21,0	0/0:16,0:15:42.13:0,42,792	1/1:0,3:3:6.02:167,6,0
chr10	103954461	.	TTC	T	342.01	PASS	AB=0.773;AC=10;AF=0.179;AN=56;BaseQRankSum=8.076;DP=365;FS=1.168;HRun=0;HaplotypeScore=240.7576;InbreedingCoeff=-0.2103;MQ=36.72;MQ0=1;MQRankSum=0.032;QD=2.24;ReadPosRankSum=1.615;VQSLOD=2.2394;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39.05:0,39,638	0/0:5,0:5:11.97:0,12,169	0/0:17,0:8:20.56:0,21,300	0/0:8,0:7:12.04:0,12,213	0/1:6,2:8:3.60:4,0,257	0/0:9,3:12:8.30:0,8,479	0/0:7,1:7:20.88:0,21,268	0/0:14,0:14:28.50:0,28,395	0/1:12,3:15:0.10:0,0,602	0/1:16,11:27:99:178,0,827	0/1:10,3:13:0.34:0,0,395	0/0:10,1:11:7.30:0,7,479	0/1:12,3:15:40.28:40,0,544	0/0:14,1:15:38.86:0,39,716	0/1:11,7:17:99:123,0,536	0/1:8,5:13:22.69:23,0,409	0/0:10,0:10:26.94:0,27,388	0/0:5,0:5:15.05:0,15,265	0/0:11,0:10:23.75:0,24,365	0/0:11,4:15:17.59:0,18,538	0/0:1,0:1:3.01:0,3,58	0/1:13,7:20:40.80:41,0,736	0/0:13,4:17:14.27:0,14,614	0/0:8,3:11:17.86:0,18,319	0/1:16,5:21:25.02:25,0,744	0/0:17,2:19:20.97:0,21,897	0/0:15,3:18:7.54:0,8,809	0/1:2,1:3:36.62:37,0,108
chr10	103954487	.	CCCA	C	3025.94	PASS	AB=0.853;AC=45;AF=0.804;AN=56;BaseQRankSum=-0.821;DP=381;FS=6.110;HRun=0;HaplotypeScore=287.3203;InbreedingCoeff=-0.0408;MQ=38.54;MQ0=0;MQRankSum=0.566;QD=8.20;ReadPosRankSum=1.687;VQSLOD=1.9038;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:22.42:187,22,0	1/1:5,0:5:13.97:65,14,0	0/0:12,0:5:6.38:0,6,89	0/1:12,0:8:6.15:6,0,169	1/1:7,3:9:3.79:18,4,0	1/1:8,3:11:21.03:127,21,0	1/1:14,0:13:36.84:175,37,0	1/1:9,0:9:22.27:103,22,0	0/1:16,3:19:69.48:129,0,69	0/1:15,9:24:39.98:221,0,40	0/1:8,3:11:5.14:93,0,5	1/1:13,0:13:10.29:114,10,0	1/1:9,1:10:13.01:79,13,0	1/1:10,1:11:25.66:149,26,0	1/1:13,5:18:45.08:216,45,0	0/1:13,5:18:93.08:93,0,95	1/1:10,0:10:6.72:90,7,0	0/1:5,0:5:22.19:22,0,23	1/1:6,0:6:16.71:80,17,0	1/1:10,3:13:26.27:145,26,0	1/1:5,0:5:7.66:30,8,0	0/1:16,6:22:6.05:163,0,6	1/1:18,4:22:16.95:176,17,0	1/1:12,2:14:16.60:82,17,0	0/1:16,5:21:19.13:123,0,19	0/1:24,2:26:25.18:230,0,25	1/1:16,2:19:47.51:232,48,0	1/1:3,0:3:5.59:26,6,0
chr10	103954494	.	CCA	C	4563.71	PASS	AB=1.000;AC=54;AF=0.964;AN=56;BaseQRankSum=-0.494;DP=345;FS=14.071;HRun=0;HaplotypeScore=267.8786;InbreedingCoeff=0.0317;MQ=39.37;MQ0=2;MQRankSum=-1.473;QD=13.23;ReadPosRankSum=-1.296;VQSLOD=3.1511;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:44.03:253,44,0	1/1:5,0:5:14.62:85,15,0	0/1:9,0:3:8.96:9,0,34	0/1:12,0:8:22.53:23,0,35	1/1:5,3:7:4.14:21,4,0	1/1:7,3:10:23.45:144,23,0	1/1:13,0:13:38.05:221,38,0	1/1:8,0:8:23.14:126,23,0	1/1:14,3:17:46.31:259,46,0	1/1:12,9:21:40.26:339,40,0	1/1:5,4:9:19.39:96,19,0	1/1:12,0:12:28.85:162,29,0	1/1:8,1:9:16.10:113,16,0	1/1:11,1:11:26.73:147,27,0	1/1:13,5:18:48.12:290,48,0	1/1:10,5:15:40.55:234,41,0	1/1:9,0:9:26.45:160,26,0	1/1:4,0:4:10.02:54,10,0	1/1:6,0:6:17.54:104,18,0	1/1:10,3:13:24.30:130,24,0	1/1:5,0:5:6.74:29,7,0	1/1:15,6:21:55.21:326,55,0	1/1:16,4:20:50.60:278,51,0	1/1:10,2:12:17.15:106,17,0	1/1:13,5:18:42.10:235,42,0	1/1:20,2:21:55.17:299,55,0	1/1:16,3:19:42.69:289,43,0	1/1:2,0:2:5.77:31,6,0
chr10	103954503	.	TC	T	4940.78	PASS	AB=0.900;AC=54;AF=0.964;AN=56;BaseQRankSum=-1.772;DP=398;FS=18.276;HRun=1;HaplotypeScore=278.0188;InbreedingCoeff=-0.0251;MQ=45.66;MQ0=8;MQRankSum=-0.788;QD=12.41;ReadPosRankSum=2.027;VQSLOD=1.5553;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:44.07:278,44,0	1/1:6,0:6:17.79:119,18,0	1/1:13,0:8:13.26:80,13,0	0/1:6,1:5:14.34:14,0,14	1/1:11,0:9:11.74:72,12,0	1/1:12,0:12:24.90:160,25,0	1/1:17,0:14:36.02:239,36,0	1/1:7,0:7:17.83:125,18,0	1/1:17,0:17:39.34:244,39,0	1/1:21,0:21:8.88:191,9,0	1/1:8,0:8:6.54:53,7,0	1/1:14,0:13:32.34:205,32,0	1/1:9,0:9:16.76:116,17,0	1/1:17,0:14:20.22:138,20,0	1/1:20,0:20:28.78:253,29,0	1/1:16,1:16:37.09:243,37,0	1/1:11,0:11:26.60:173,27,0	1/1:7,0:7:16.75:99,17,0	0/1:9,0:8:33.03:62,0,33	1/1:14,0:14:24.09:157,24,0	1/1:9,0:9:14.25:83,14,0	1/1:23,0:23:55.03:340,55,0	1/1:22,1:22:37.44:283,37,0	1/1:16,1:17:22.96:152,23,0	1/1:19,0:19:37.97:234,38,0	1/1:27,0:25:63.38:411,63,0	1/1:20,1:20:56.20:374,56,0	1/1:2,0:2:5.94:40,6,0
chr10	103954509	.	C	CTT	1136.39	PASS	AB=0.927;AC=28;AF=0.500;AN=56;BaseQRankSum=-3.586;DP=419;FS=2.000;HRun=0;HaplotypeScore=293.2107;InbreedingCoeff=-0.6104;MQ=50.78;MQ0=8;MQRankSum=-1.008;QD=2.93;ReadPosRankSum=-8.772;VQSLOD=-0.0600;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:15.25:36,0,15	0/0:6,0:6:5.37:0,5,19	0/1:13,0:9:22.57:23,0,76	0/0:14,0:10:1.36:0,1,42	0/1:9,0:9:13.44:28,0,13	0/1:13,3:16:4.99:68,0,5	0/1:20,0:17:22.64:23,0,70	0/1:11,0:11:40.57:41,0,41	0/1:13,2:15:13.98:14,0,35	0/1:12,4:16:10.09:10,0,94	0/1:5,4:9:7.55:10,0,8	0/1:12,0:11:12.63:29,0,13	0/1:9,1:10:15.60:16,0,20	0/1:17,1:15:10.97:59,0,11	0/1:17,0:20:8.57:56,0,9	0/1:12,4:15:25.72:26,0,34	0/0:11,0:11:2.24:0,2,17	0/1:8,0:8:23.42:23,0,27	0/1:9,1:9:68.16:88,0,68	1/1:11,3:15:1.21:93,1,0	1/1:10,0:10:8.93:71,9,0	0/1:17,2:23:6.84:178,0,7	0/1:16,4:21:18.80:94,0,19	0/1:18,1:19:31.77:76,0,32	1/1:15,4:19:0.06:145,0,0	0/1:25,0:25:17.33:17,0,131	0/1:20,3:22:55.71:56,0,61	0/1:3,0:3:3.60:4,0,11
chr10	103957540	.	GGGAAGCCACCCCTGAGCCCTT	G	7076.52	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.565;DP=650;FS=17.364;HRun=0;HaplotypeScore=342.3725;InbreedingCoeff=0.9894;MQ=88.44;MQ0=0;MQRankSum=-9.549;QD=76.92;ReadPosRankSum=1.468;VQSLOD=2.8896;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:84.27:0,84,7141	0/0:8,0:8:21.07:0,21,1782	0/0:24,0:24:51.64:0,52,2438	0/0:28,0:28:66.23:0,66,4024	1/1:3,14:17:24.08:1159,24,0	0/0:16,0:16:48.16:0,48,4575	0/0:31,0:31:87.23:0,87,7107	0/0:25,0:25:66.22:0,66,4685	0/0:29,0:29:87.30:0,87,8096	0/0:22,0:22:60.21:0,60,4755	0/0:9,0:9:21.07:0,21,1849	0/0:34,0:34:99:0,102,8998	0/0:28,0:28:84.27:0,84,7133	0/0:31,0:31:87.25:0,87,7777	1/1:6,22:28:24.08:1397,24,0	0/0:18,0:18:54.19:0,54,5080	0/0:38,0:38:99:0,111,9704	0/0:40,0:40:99:0,111,10019	0/0:19,0:19:51.18:0,51,4330	0/0:17,0:17:45.15:0,45,3900	0/0:26,0:26:72.25:0,72,6364	1/1:1,13:14:24.08:1295,24,0	0/0:11,0:11:33.11:0,33,2852	0/0:24,0:24:66.23:0,66,5947	0/0:22,0:22:63.19:0,63,5817	1/1:2,25:27:68.83:2527,69,0	0/0:22,0:22:60.19:0,60,4634	1/1:0,6:6:12.04:699,12,0
chr10	103958816	.	CATAG	C	2399.38	PASS	AB=0.882;AC=34;AF=0.680;AN=50;BaseQRankSum=4.311;DP=727;FS=11.575;HRun=0;HaplotypeScore=134.2544;InbreedingCoeff=0.3626;MQ=69.67;MQ0=6;MQRankSum=0.409;QD=4.84;ReadPosRankSum=-1.040;VQSLOD=1.7473;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,10:42:3.01:45,3,0	1/1:5,0:5:6.02:90,6,0	./.	./.	0/0:30,0:30:2.99:0,3,24	0/1:17,10:27:52.56:165,0,53	1/1:21,0:21:2.99:24,3,0	./.	0/0:14,0:23:6:0,6,76	0/1:32,0:32:1.83:2,0,361	0/0:23,0:23:18.02:0,18,271	1/1:12,11:23:9.03:135,9,0	1/1:14,0:31:9:85,9,0	1/1:12,0:19:3:28,3,0	1/1:28,0:28:6.01:56,6,0	0/0:18,0:24:6.01:0,6,78	1/1:29,7:36:32.21:630,32,0	0/0:34,0:32:45.10:0,45,867	1/1:22,0:22:3.01:45,3,0	1/1:19,12:31:12.03:180,12,0	1/1:18,6:24:9.03:135,9,0	0/0:17,0:17:0:0,0,0	1/1:13,5:18:9.03:135,9,0	1/1:10,10:20:21.07:315,21,0	0/1:27,8:35:3.93:249,0,4	0/1:31,0:31:64.23:117,0,64	1/1:21,12:33:6.02:90,6,0	1/1:17,0:17:3:26,3,0
chr10	103958870	.	TAGATAGATAGAC	T	1347.24	PASS	AB=0.847;AC=9;AF=0.161;AN=56;BaseQRankSum=6.687;DP=676;FS=2.353;HRun=0;HaplotypeScore=217.3406;InbreedingCoeff=0.5301;MQ=57.94;MQ0=13;MQRankSum=1.214;QD=9.49;ReadPosRankSum=-0.279;VQSLOD=2.7422;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:56.60:0,57,579	0/0:9,0:9:27.03:0,27,481	0/0:8,0:5:13.26:0,13,121	0/1:2,0:2:0.83:1,0,22	1/1:4,25:29:5.06:70,5,0	0/0:33,0:33:79.25:0,79,1163	0/0:22,0:21:36.31:0,36,354	0/0:51,0:42:99:0,119,958	0/0:14,0:14:18.01:0,18,351	0/0:32,0:30:87.15:0,87,1546	0/0:19,0:19:51.03:0,51,1125	0/0:25,0:25:47.98:0,48,571	0/1:31,0:31:2.77:3,0,411	0/0:19,0:19:31.67:0,32,241	1/1:2,29:31:8.77:228,9,0	0/0:24,0:23:42.01:0,42,603	0/0:41,0:40:99:0,100,1950	0/0:26,0:25:49.76:0,50,2251	0/0:12,0:10:22.14:0,22,225	0/0:28,0:28:60.42:0,60,913	0/0:9,0:9:18.02:0,18,338	0/0:0,23:23:0.94:0,1,4	0/0:24,0:24:57:0,57,890	0/0:23,0:23:48.04:0,48,810	0/0:21,0:21:48.06:0,48,820	0/1:4,23:27:79.64:1060,0,80	0/0:29,0:29:56.66:0,57,672	1/1:4,18:22:3.01:110,3,0
chr10	103961665	.	A	AT	2125.38	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-9.316;DP=559;FS=6.011;HRun=9;HaplotypeScore=54.6666;InbreedingCoeff=0.9911;MQ=82.70;MQ0=0;MQRankSum=0.486;QD=25.92;ReadPosRankSum=0.867;VQSLOD=4.3415;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:41.91:0,42,352	0/0:11,0:11:29.96:0,30,253	0/0:23,0:22:30.13:0,30,258	0/0:11,0:11:17.79:0,18,139	1/1:3,21:24:63.17:696,63,0	0/0:33,0:33:63.46:0,63,702	0/0:14,0:14:32.98:0,33,287	0/0:33,0:33:80.95:0,81,696	0/0:15,0:15:44.99:0,45,391	0/0:18,0:18:53.98:0,54,466	0/0:22,0:22:59.94:0,60,512	0/0:22,0:22:65.94:0,66,562	0/0:26,0:26:77.97:0,78,673	0/0:14,0:14:35.99:0,36,313	1/1:3,16:19:48.13:531,48,0	0/0:20,0:20:56.98:0,57,493	0/0:28,0:28:80.93:0,81,692	0/0:27,0:27:71.98:0,72,624	0/0:18,0:18:44.94:0,45,378	0/0:29,0:29:77.98:0,78,677	0/0:10,0:10:20.98:0,21,180	1/1:2,16:18:45.08:484,45,0	0/0:29,0:29:83.96:0,84,725	0/0:10,0:10:17.94:0,18,149	0/0:20,0:20:56.98:0,57,493	1/1:2,13:15:39.09:423,39,0	0/0:25,0:25:71.95:0,72,619	1/1:1,5:6:15.04:166,15,0
chr10	103962321	.	GGAAGAAGAAGAAGAA	G	188.19	PASS	AB=0.846;AC=4;AF=0.074;AN=54;BaseQRankSum=2.993;DP=380;FS=6.747;HRun=0;HaplotypeScore=136.4823;InbreedingCoeff=0.2218;MQ=70.04;MQ0=10;MQRankSum=-1.071;QD=6.72;ReadPosRankSum=0.667;VQSLOD=2.2600;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:60.09:0,60,2283	0/0:6,0:6:10.28:0,10,335	0/0:25,0:19:3.01:0,3,76	0/0:22,0:19:6.49:0,6,146	1/1:4,9:12:2.94:18,3,0	0/0:16,0:15:36.12:0,36,1379	0/0:25,0:16:27.07:0,27,961	0/0:14,0:12:6.01:0,6,86	0/0:8,0:8:18.06:0,18,399	0/0:17,0:16:45.15:0,45,2404	0/0:13,0:13:27.09:0,27,1218	0/0:12,0:10:27.09:0,27,1290	0/0:9,0:9:18.06:0,18,821	0/0:14,0:13:21.07:0,21,982	0/1:6,0:6:7.96:169,0,8	0/0:15,0:14:24.08:0,24,1174	0/0:14,0:13:21.07:0,21,811	0/0:11,0:11:27.05:0,27,936	0/0:13,0:12:6.01:0,6,181	0/0:5,0:10:9.01:0,9,93	0/0:20,0:17:32.96:0,33,374	0/0:7,0:11:2.94:0,3,18	0/0:11,0:11:24.07:0,24,923	0/0:17,0:17:39.13:0,39,1674	0/0:11,0:11:29.91:0,30,1272	0/1:5,0:7:99:101,0,142	0/0:7,0:7:12.03:0,12,123	./.
chr10	103963799	.	C	CACAG	4019.17	PASS	AB=0.893;AC=9;AF=0.161;AN=56;BaseQRankSum=-4.039;DP=1175;FS=0.928;HRun=0;HaplotypeScore=186.9624;InbreedingCoeff=0.6257;MQ=47.97;MQ0=70;MQRankSum=0.418;QD=12.64;ReadPosRankSum=-0.562;VQSLOD=3.1629;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:99:0,111,1721	0/0:10,0:10:16.28:0,16,255	0/0:33,0:6:7.08:0,7,145	0/1:61,0:7:7.17:7,0,46	1/1:38,6:28:27.95:647,28,0	0/0:29,0:27:59.35:0,59,939	0/0:53,0:50:60.11:0,60,917	0/0:50,0:40:99:0,102,1411	0/0:31,0:30:60.83:0,61,1020	0/0:56,0:48:99:0,126,1848	0/0:16,0:16:24.05:0,24,378	0/0:39,0:38:90.24:0,90,1491	0/0:35,0:34:76.09:0,76,1135	0/0:45,0:45:99:0,108,1551	1/1:69,16:63:63.73:1388,64,0	0/0:38,0:38:89.44:0,89,1419	0/0:43,0:42:65.78:0,66,1336	0/0:36,0:36:96.24:0,96,1531	0/0:23,0:18:42.03:0,42,557	0/0:32,0:27:60.07:0,60,849	0/0:103,0:91:99:0,211,3209	1/1:47,10:33:36.06:768,36,0	0/0:19,0:16:24.08:0,24,404	0/0:61,0:60:99:0,156,2486	0/0:29,0:29:48.09:0,48,704	0/1:48,5:35:8.19:1027,0,8	0/0:26,0:24:60.12:0,60,937	0/1:10,4:12:15.39:183,0,15
chr10	103963861	.	GACAC	G	1093.64	PASS	AB=0.825;AC=6;AF=0.107;AN=56;BaseQRankSum=4.208;DP=1112;FS=9.455;HRun=0;HaplotypeScore=167.0726;InbreedingCoeff=0.4171;MQ=46.05;MQ0=95;MQRankSum=1.135;QD=7.70;ReadPosRankSum=4.853;VQSLOD=2.0391;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:46:95.99:0,96,2057	0/0:11,0:10:15.05:0,15,340	0/0:47,0:4:6.28:0,6,57	0/0:61,0:2:2.96:0,3,19	0/0:22,5:18:2.99:0,3,24	0/0:24,0:22:41.50:0,42,924	0/0:48,0:46:99:0,102,1829	0/0:60,0:47:99:0,108,2040	0/0:32,0:32:65.75:0,66,1651	0/0:56,0:54:99:0,126,2515	0/0:13,0:13:18.04:0,18,366	0/0:34,0:33:87.20:0,87,1926	0/0:40,0:40:89.21:0,89,1873	0/0:39,0:40:95.58:0,96,2009	0/1:48,17:55:22.15:677,0,22	0/0:43,0:41:90.24:0,90,1933	0/0:41,0:41:95.91:0,96,2158	0/0:41,0:42:99:0,102,2194	0/0:32,0:14:39:0,39,779	0/0:31,0:26:41.82:0,42,820	0/0:105,0:95:99:0,223,5175	1/1:26,7:19:3.01:53,3,0	0/0:13,0:11:27.09:0,27,688	0/0:60,0:60:99:0,138,2781	0/0:39,0:38:75.17:0,75,1618	0/1:29,5:22:99:324,0,124	0/0:17,0:14:33.11:0,33,695	1/1:1,6:7:9.03:159,9,0
chr10	103965639	.	A	AC	3953.12	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.725;DP=562;FS=0.859;HRun=3;HaplotypeScore=60.6928;InbreedingCoeff=0.9994;MQ=87.65;MQ0=0;MQRankSum=-2.381;QD=36.60;ReadPosRankSum=3.151;VQSLOD=4.2512;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1239	0/0:13,0:13:36.11:0,36,431	0/0:23,0:23:59.72:0,60,667	0/0:16,0:16:36.11:0,36,429	1/1:1,27:28:75.25:1049,75,0	0/0:22,0:22:63.19:0,63,756	0/0:20,0:20:60.18:0,60,719	0/0:24,0:24:60.14:0,60,704	0/0:19,0:19:48.15:0,48,576	0/0:19,0:19:54.17:0,54,648	0/0:15,0:15:39.09:0,39,453	0/0:16,0:16:39.08:0,39,452	0/0:15,0:15:45.14:0,45,537	0/0:17,0:17:45.14:0,45,540	1/1:3,19:22:54.18:756,54,0	0/0:19,0:19:54.17:0,54,648	0/0:31,0:30:90.23:0,90,1064	0/0:21,0:21:63.19:0,63,755	0/0:17,0:17:42.13:0,42,504	0/0:19,0:19:57.17:0,57,683	0/0:21,0:21:60.18:0,60,720	1/1:0,13:13:36.12:504,36,0	0/0:21,0:21:54.12:0,54,629	0/0:19,0:19:54.17:0,54,646	0/0:8,0:8:24.07:0,24,288	1/1:3,27:30:48.27:1098,48,0	0/0:24,0:24:66.19:0,66,780	1/1:0,15:15:39.13:546,39,0
chr10	103966644	.	GCA	G	182.49	PASS	AB=0.914;AC=8;AF=0.154;AN=52;BaseQRankSum=4.222;DP=629;FS=0.000;HRun=0;HaplotypeScore=94.1446;InbreedingCoeff=-0.2346;MQ=56.10;MQ0=10;MQRankSum=2.751;QD=0.84;ReadPosRankSum=1.346;VQSLOD=1.6353;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:36:22.98:23,0,586	0/1:11,1:12:15.04:15,0,176	./.	./.	0/0:13,0:13:6.40:0,6,67	0/1:26,2:28:28.11:28,0,412	0/0:36,0:36:17.35:0,17,692	0/0:20,0:19:17.34:0,17,173	0/1:16,12:29:19.09:158,0,19	0/1:13,0:10:15:15,0,187	0/0:14,0:14:15.05:0,15,225	0/0:17,3:20:12.09:0,12,588	0/0:16,0:16:21.07:0,21,305	0/0:19,0:21:27:0,27,359	0/0:24,0:29:20.72:0,21,161	0/0:19,2:21:2.99:0,3,378	0/1:37,3:40:14.65:15,0,739	0/0:26,0:25:44.36:0,44,704	0/0:13,0:13:9.96:0,10,106	0/0:7,0:14:8.74:0,9,62	0/0:23,0:36:6:0,6,52	0/0:10,0:17:8.66:0,9,75	0/0:13,0:14:0.91:0,1,166	0/1:39,3:43:36.06:36,0,922	0/1:16,1:17:20.49:20,0,267	0/0:15,0:27:32.47:0,32,290	0/0:13,0:14:9.63:0,10,70	0/0:12,0:12:2.88:0,3,47
chr10	103967114	.	A	ATGTGTG	6545.25	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-2.380;DP=848;FS=12.221;HRun=0;HaplotypeScore=175.2480;InbreedingCoeff=0.8635;MQ=66.14;MQ0=2;MQRankSum=-10.456;QD=35.00;ReadPosRankSum=-1.531;VQSLOD=3.6674;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:38:64.30:0,64,1714	0/0:16,0:16:27.09:0,27,572	0/0:38,0:25:14.51:0,15,364	0/0:20,0:17:6.29:0,6,241	1/1:6,14:24:36.12:1018,36,0	0/0:18,0:18:39.12:0,39,786	0/1:28,0:30:16.66:17,0,1224	0/0:39,0:39:50.66:0,51,1019	0/0:44,0:46:99:0,117,2338	0/0:38,0:38:66.19:0,66,1311	0/0:25,0:26:60.18:0,60,1194	0/0:33,0:33:69.20:0,69,1345	0/0:39,0:39:93.30:0,93,1916	0/0:29,0:29:66.21:0,66,1341	1/1:8,28:38:72.25:2244,72,0	0/0:31,0:33:81.25:0,81,1594	0/0:20,0:20:42.14:0,42,889	0/0:14,0:14:33.11:0,33,697	0/0:26,0:26:42.05:0,42,790	0/0:27,0:28:69.24:0,69,1399	0/0:45,0:46:99:0,117,2376	1/1:5,24:30:36.12:1189,36,0	0/0:25,0:26:66.18:0,66,1292	0/0:35,0:37:78.20:0,78,1415	0/0:25,0:26:48.13:0,48,918	1/1:10,19:32:58.79:1551,59,0	0/0:24,0:24:54.19:0,54,1127	1/1:6,17:33:18.06:527,18,0
chr10	103967863	.	CT	C	2179.20	PASS	AB=0.538;AC=9;AF=0.161;AN=56;BaseQRankSum=9.504;DP=623;FS=0.000;HRun=4;HaplotypeScore=63.3871;InbreedingCoeff=0.8615;MQ=75.89;MQ0=0;MQRankSum=0.891;QD=23.95;ReadPosRankSum=1.577;VQSLOD=2.4154;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.27:0,84,1153	0/0:12,0:12:30.06:0,30,383	0/0:17,0:17:19.64:0,20,312	0/0:21,0:19:50.99:0,51,551	1/1:5,8:13:18.01:199,18,0	0/0:18,0:18:51.17:0,51,714	0/0:28,0:28:81.14:0,81,1073	0/0:24,0:24:51.11:0,51,661	0/0:25,0:25:75.10:0,75,1004	0/0:16,0:16:20.02:0,20,602	0/0:9,0:9:27.08:0,27,362	0/0:29,0:29:84.24:0,84,1136	0/0:28,0:28:84.27:0,84,1157	0/0:30,0:30:87.27:0,87,1199	1/1:3,24:27:63.19:753,63,0	0/0:18,0:18:51.15:0,51,695	0/0:31,0:31:93.28:0,93,1266	0/0:18,0:18:48.10:0,48,631	0/0:21,0:21:57.18:0,57,782	0/0:11,0:11:27.09:0,27,378	0/0:52,0:52:99:0,147,1968	1/1:2,12:14:30.09:360,30,0	0/0:9,0:9:21.07:0,21,294	0/0:40,0:39:99:0,120,1575	0/0:24,0:24:72.20:0,72,945	0/1:3,18:21:26.87:528,0,27	0/0:19,0:19:45.15:0,45,629	1/1:0,16:16:42.13:503,42,0
chr10	103968570	.	G	GA	866.11	PASS	AB=0.900;AC=15;AF=0.268;AN=56;BaseQRankSum=0.580;DP=515;FS=6.475;HRun=13;HaplotypeScore=85.1443;InbreedingCoeff=0.2565;MQ=64.70;MQ0=0;MQRankSum=-0.318;QD=4.68;ReadPosRankSum=-5.406;VQSLOD=0.5823;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:38:48.02:0,48,354	0/0:8,0:9:10.41:0,10,54	0/0:5,0:6:6.58:0,7,18	0/1:8,0:8:13.51:14,0,26	0/0:22,0:22:24.40:0,24,68	0/0:15,0:15:3.03:0,3,141	0/0:24,1:26:15.67:0,16,242	1/1:8,18:27:1.54:273,2,0	0/1:9,2:14:31.80:32,0,76	0/0:17,0:17:20.39:0,20,143	0/1:10,3:14:12.58:13,0,88	0/0:21,0:21:33.60:0,34,218	0/1:13,1:14:4.17:4,0,120	0/0:13,4:19:11.04:0,11,207	0/0:21,0:21:17.68:0,18,48	0/0:14,0:16:45.66:0,46,295	0/0:38,0:42:24.51:0,25,283	0/0:15,1:19:10.75:0,11,194	1/1:6,10:18:11.34:236,11,0	1/1:7,6:16:15.22:141,15,0	0/1:12,8:21:11.72:195,0,12	0/0:14,0:14:7.88:0,8,23	0/1:12,0:13:4.57:5,0,102	0/1:12,1:17:19.81:20,0,129	0/0:16,1:17:2.73:0,3,160	0/0:16,0:16:13.56:0,14,40	1/1:10,13:23:12.16:95,12,0	0/0:9,0:9:11.03:0,11,39
chr10	103968581	.	AAAG	A	1990.38	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.685;DP=514;FS=2.344;HRun=0;HaplotypeScore=88.7247;InbreedingCoeff=0.9922;MQ=72.12;MQ0=0;MQRankSum=0.144;QD=23.98;ReadPosRankSum=1.302;VQSLOD=3.6898;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,104,1628	0/0:8,0:8:20.74:0,21,357	0/0:14,0:11:29.94:0,30,268	0/0:11,0:11:32.91:0,33,334	1/1:2,24:26:68.15:760,68,0	0/0:14,0:14:42.12:0,42,740	0/0:21,0:21:63.14:0,63,1051	0/0:32,0:32:84.70:0,85,1091	0/0:16,0:16:44.75:0,45,609	0/0:19,0:19:51.35:0,51,762	0/0:12,0:12:15.54:0,16,512	0/0:21,0:21:57.16:0,57,1008	0/0:13,0:13:36.09:0,36,631	0/0:19,0:19:46.37:0,46,802	1/1:2,17:19:33.07:444,33,0	0/0:17,0:17:50.82:0,51,937	0/0:36,0:36:95.63:0,96,1579	0/0:19,0:19:48.60:0,49,813	0/0:16,0:16:45.07:0,45,640	0/0:14,0:14:35.82:0,36,438	0/0:22,0:22:62.76:0,63,839	1/1:2,11:13:22.40:236,22,0	0/0:14,0:14:33.10:0,33,555	0/0:18,0:18:45.06:0,45,712	0/0:17,0:17:46.32:0,46,771	1/1:3,14:17:45.02:487,45,0	0/0:21,0:21:27.47:0,27,352	1/1:4,4:8:17.47:239,17,0
chr10	103969674	.	A	AG	11743.45	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-15.741;DP=761;FS=14.230;HRun=1;HaplotypeScore=69.6091;InbreedingCoeff=0.9989;MQ=83.27;MQ0=0;MQRankSum=-1.982;QD=41.21;ReadPosRankSum=0.571;VQSLOD=3.9003;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,153,1986	0/0:9,0:9:24.08:0,24,312	0/0:25,0:25:68.81:0,69,711	0/0:21,0:21:62.88:0,63,733	1/1:0,34:34:93.32:1392,93,0	0/0:17,0:17:51.15:0,51,648	0/0:39,0:39:99:0,117,1518	1/1:2,28:30:87.19:1246,87,0	0/0:27,0:27:78.25:0,78,1013	0/0:26,0:26:75.24:0,75,963	0/0:14,0:14:36.11:0,36,452	0/0:22,0:22:63.20:0,63,818	0/0:33,0:33:96.31:0,96,1244	0/0:20,0:20:51.17:0,51,662	1/1:2,35:37:99:1529,102,0	0/0:25,0:25:75.21:0,75,932	0/0:46,0:46:99:0,135,1749	0/0:25,0:25:75.18:0,75,926	1/1:0,25:25:75.24:1100,75,0	1/1:0,24:24:69.23:1034,69,0	1/1:4,53:57:99:2289,154,0	1/1:0,31:31:90.30:1348,90,0	0/0:21,0:21:63.17:0,63,789	0/0:23,0:23:69.21:0,69,883	0/0:31,0:31:90.25:0,90,1126	1/1:4,21:25:27.22:860,27,0	1/1:0,15:15:42.14:629,42,0	1/1:0,7:7:21.07:315,21,0
chr10	103971430	.	C	CTT	5617.51	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-11.816;DP=537;FS=12.627;HRun=1;HaplotypeScore=60.8939;InbreedingCoeff=0.9971;MQ=92.12;MQ0=1;MQRankSum=-3.821;QD=51.07;ReadPosRankSum=-1.362;VQSLOD=3.1623;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,1788	0/0:8,0:8:21.06:0,21,301	0/0:19,0:19:53.77:0,54,806	0/0:26,0:26:70.62:0,71,972	0/0:16,0:16:48.15:0,48,713	0/0:7,0:7:21.07:0,21,322	0/0:17,0:17:51.16:0,51,760	1/1:1,29:30:84.29:1609,84,0	0/0:17,0:17:51.17:0,51,778	0/0:16,0:16:42.14:0,42,642	0/0:19,0:19:57.19:0,57,871	0/0:18,0:18:54.18:0,54,821	0/0:16,0:16:48.15:0,48,714	0/0:20,0:20:57.19:0,57,873	0/0:23,0:23:63.21:0,63,965	0/0:18,0:18:54.18:0,54,825	0/0:31,0:31:93.32:0,93,1422	0/0:17,0:17:51.14:0,51,752	1/1:2,14:17:48.16:913,48,0	1/1:1,23:23:69.15:1257,69,0	1/1:2,21:24:54.19:1044,54,0	0/0:20,0:20:60.20:0,60,917	0/0:11,0:11:33.09:0,33,483	0/0:27,0:27:78.22:0,78,1169	0/0:14,0:14:42.10:0,42,578	0/0:18,0:18:54.18:0,54,826	1/1:2,13:15:42.14:794,42,0	0/0:7,0:7:21.05:0,21,300
chr10	103972802	.	A	ATATGTAAT	25184.10	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-10.058;DP=763;FS=5.483;HRun=0;HaplotypeScore=172.4214;InbreedingCoeff=0.9999;MQ=77.05;MQ0=0;MQRankSum=-18.701;QD=99.15;ReadPosRankSum=-4.174;VQSLOD=4.1997;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,150,3932	0/0:12,0:12:33.10:0,33,864	0/0:27,0:27:66.74:0,67,1901	0/0:20,0:20:45.15:0,45,1200	1/1:6,19:26:57.15:1876,57,0	0/0:32,0:32:93.31:0,93,2402	0/0:19,0:19:54.17:0,54,1447	1/1:13,17:32:90.31:3296,90,0	0/0:32,0:32:75.26:0,75,2003	0/0:29,0:29:87.29:0,87,2299	0/0:26,0:26:75.26:0,75,2095	0/0:25,0:25:75.24:0,75,2008	0/0:25,0:25:69.24:0,69,1931	0/0:28,0:28:81.26:0,81,2110	1/1:5,26:33:81.28:3342,81,0	0/0:33,0:33:96.32:0,96,2556	0/0:28,0:28:81.28:0,81,2210	0/0:29,0:29:78.22:0,78,2025	1/1:11,12:26:78.22:2596,78,0	1/1:2,12:15:42.14:1635,42,0	1/1:1,15:18:36.12:1440,36,0	1/1:1,22:24:66.23:2850,66,0	0/0:25,0:25:75.24:0,75,2008	0/0:48,0:48:99:0,135,3678	0/0:17,0:17:48.16:0,48,1309	1/1:4,29:34:96.33:3926,96,0	1/1:8,23:33:69.24:2946,69,0	1/1:1,10:13:30.10:1277,30,0
chr10	103973592	.	GACCACCTTGTGTA	G	5983.28	PASS	AB=0.840;AC=14;AF=0.250;AN=56;BaseQRankSum=13.962;DP=812;FS=1.192;HRun=0;HaplotypeScore=295.6806;InbreedingCoeff=0.6143;MQ=58.53;MQ0=15;MQRankSum=-0.644;QD=23.28;ReadPosRankSum=-6.106;VQSLOD=2.0328;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,4559	0/0:15,0:15:42.12:0,42,1561	0/0:37,0:7:14.72:0,15,378	0/0:34,0:14:23.51:0,24,381	0/1:14,10:24:99:213,0,955	0/0:19,0:18:54.19:0,54,2048	0/0:43,0:43:99:0,123,4274	1/1:16,11:27:28.05:594,28,0	0/0:36,0:36:99:0,99,3947	0/0:30,0:30:87.30:0,87,3313	0/0:23,0:23:69.21:0,69,2245	0/0:32,0:32:90.31:0,90,3513	0/0:27,0:27:78.26:0,78,3170	0/0:33,0:33:93.32:0,93,3727	0/1:36,0:36:99:787,0,792	0/0:30,0:30:84.29:0,84,3187	0/0:23,0:23:60.13:0,60,2275	0/0:23,0:23:48.13:0,48,2489	1/1:8,14:18:49.34:841,49,0	1/1:2,27:29:23.93:396,24,0	1/1:40,0:36:55.20:832,55,0	0/0:8,20:27:17.64:0,18,563	0/0:25,0:24:72.21:0,72,2583	0/0:26,0:25:72.25:0,72,2803	0/0:26,0:26:78.27:0,78,2963	0/1:18,20:37:99:919,0,1293	1/1:25,0:24:59.26:1257,59,0	0/1:16,0:16:99:145,0,762
chr10	103973837	.	G	GAA	4218.89	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-7.229;DP=612;FS=0.854;HRun=7;HaplotypeScore=74.0375;InbreedingCoeff=0.9944;MQ=82.69;MQ0=0;MQRankSum=-3.295;QD=40.57;ReadPosRankSum=0.776;VQSLOD=4.4448;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.21:0,72,837	0/0:15,0:15:42.11:0,42,479	0/0:24,0:24:54.13:0,54,616	0/0:13,0:13:14.20:0,14,202	1/1:5,25:30:83.99:1130,84,0	0/0:27,0:27:78.21:0,78,898	0/0:22,0:22:57.15:0,57,654	0/0:24,0:24:57.14:0,57,646	0/0:24,0:24:66.18:0,66,769	0/0:26,0:26:75.20:0,75,857	0/0:19,0:19:54.13:0,54,617	0/0:18,0:18:42.10:0,42,479	0/0:19,0:19:51.07:0,51,578	0/0:11,0:11:21.04:0,21,234	1/1:2,16:18:48.16:788,48,0	0/0:23,0:23:63.17:0,63,724	0/0:33,0:33:96.26:0,96,1105	0/0:14,0:14:36.10:0,36,420	0/0:24,0:24:60.10:0,60,655	0/0:30,0:30:78.21:0,78,896	0/0:12,0:12:33.10:0,33,385	1/1:6,14:20:48.11:732,48,0	0/0:22,0:22:60.18:0,60,699	0/0:25,0:25:72.19:0,72,827	0/0:37,0:37:99:0,102,1167	1/1:2,22:24:69.17:1076,69,0	0/0:20,0:20:51.15:0,51,593	1/1:0,12:12:30.10:492,30,0
chr10	103973907	.	A	AG	8372.23	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-11.140;DP=631;FS=1.016;HRun=3;HaplotypeScore=67.0893;InbreedingCoeff=0.9998;MQ=87.74;MQ0=0;MQRankSum=-3.999;QD=36.56;ReadPosRankSum=0.317;VQSLOD=5.2817;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.27:0,87,1043	0/0:11,0:11:30.07:0,30,339	0/0:23,0:23:58.66:0,59,634	0/0:23,0:23:57.05:0,57,620	1/1:3,27:30:79.50:1082,80,0	0/0:19,0:19:54.15:0,54,635	0/0:21,0:21:57.17:0,57,674	1/1:6,30:36:87.27:1183,87,0	0/0:23,0:23:66.11:0,66,752	0/0:32,0:32:90.24:0,90,1047	0/0:22,0:22:60.11:0,60,696	0/0:21,0:21:63.18:0,63,744	0/0:23,0:23:66.19:0,66,780	0/0:24,0:24:66.20:0,66,791	1/1:0,22:21:63.21:873,63,0	0/0:17,0:16:42.13:0,42,504	0/0:20,0:20:54.17:0,54,648	0/0:17,0:17:48.15:0,48,576	1/1:0,25:25:75.25:1044,75,0	1/1:0,16:16:39.13:544,39,0	1/1:2,28:30:75.25:1049,75,0	1/1:1,15:16:45.15:625,45,0	0/0:18,0:18:54.07:0,54,615	0/0:23,0:23:59.91:0,60,683	0/0:32,0:32:90.26:0,90,1060	1/1:4,21:25:33.24:880,33,0	1/1:1,16:17:48.16:672,48,0	1/1:0,12:12:30.10:419,30,0
chr10	103974059	.	A	ACCGG	5038.79	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=6.352;DP=670;FS=10.084;HRun=0;HaplotypeScore=134.2427;InbreedingCoeff=0.6102;MQ=79.05;MQ0=0;MQRankSum=-8.793;QD=23.55;ReadPosRankSum=-5.646;VQSLOD=2.6844;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,2452	0/0:5,0:5:12.02:0,12,204	0/0:24,0:24:72.24:0,72,1334	0/0:12,0:12:36.02:0,36,549	0/1:17,0:17:34.79:35,0,275	0/0:14,0:14:42.11:0,42,768	0/0:30,0:30:90.25:0,90,1657	1/1:23,15:38:33.84:1397,34,0	0/0:25,0:25:75.23:0,75,1427	0/0:19,0:19:54.17:0,54,981	0/0:24,0:24:69.10:0,69,1146	0/0:27,0:27:78.24:0,78,1482	0/0:22,0:22:66.23:0,66,1305	0/0:32,0:32:96.29:0,96,1801	0/1:35,0:35:2.76:3,0,769	0/0:29,0:29:81.27:0,81,1573	0/0:46,0:46:99:0,135,2411	0/0:28,0:28:81.20:0,81,1506	1/1:9,3:12:13.39:307,13,0	1/1:7,6:13:22.90:460,23,0	1/1:14,19:33:55.94:1042,56,0	0/1:16,0:16:25.02:25,0,224	0/0:17,0:17:48.12:0,48,802	0/0:39,0:39:99:0,117,2204	0/0:17,0:17:51.15:0,51,965	0/1:22,0:22:41.41:41,0,441	1/1:3,25:28:69.24:1728,69,0	0/0:1,0:1:3.01:0,3,35
chr10	103974698	.	CGGAGGAGGAGGGT	C	5434.30	PASS	AB=0.531;AC=9;AF=0.161;AN=56;BaseQRankSum=11.110;DP=636;FS=1.075;HRun=0;HaplotypeScore=237.7678;InbreedingCoeff=0.8379;MQ=73.90;MQ0=0;MQRankSum=-9.696;QD=61.06;ReadPosRankSum=1.942;VQSLOD=4.3754;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.32:0,96,4846	0/0:12,0:12:33.11:0,33,1754	0/0:32,0:30:58.29:0,58,3093	0/0:43,0:42:63.09:0,63,3757	1/1:2,13:15:6.02:76,6,0	0/0:17,0:17:51.18:0,51,3093	0/0:25,0:25:72.23:0,72,3842	0/0:26,0:26:75.25:0,75,3285	0/0:24,0:24:69.22:0,69,3674	0/0:22,0:22:63.21:0,63,2971	0/0:15,0:15:39.12:0,39,2112	0/0:26,0:26:78.27:0,78,4351	0/0:24,0:24:72.25:0,72,4118	0/0:24,0:24:72.25:0,72,4129	1/1:2,22:24:42.14:1688,42,0	0/0:21,0:21:60.21:0,60,3123	0/0:21,0:21:60.21:0,60,3273	0/0:17,0:17:48.16:0,48,2497	0/0:23,0:23:63.22:0,63,3137	0/0:22,0:22:66.23:0,66,3839	0/0:35,0:35:99:0,99,5411	1/1:0,19:19:35.95:1261,36,0	0/0:14,0:14:33.11:0,33,1413	0/0:30,0:30:90.31:0,90,5101	0/0:27,0:27:78.27:0,78,3694	0/1:2,15:17:99:1150,0,198	0/0:12,0:12:36.12:0,36,2133	1/1:0,14:14:33.11:1259,33,0
chr10	103975190	.	T	TTGA	5317.43	PASS	AB=0.523;AC=9;AF=0.161;AN=56;BaseQRankSum=-10.287;DP=624;FS=8.550;HRun=0;HaplotypeScore=86.8062;InbreedingCoeff=0.8368;MQ=80.65;MQ0=0;MQRankSum=-4.251;QD=60.43;ReadPosRankSum=2.491;VQSLOD=6.7936;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,156,2741	0/0:11,0:11:33.11:0,33,615	0/0:14,0:14:42.14:0,42,726	0/0:18,0:18:51.17:0,51,945	1/1:3,11:16:33.11:767,33,0	0/0:24,0:24:72.25:0,72,1341	0/0:35,0:35:99:0,105,1943	0/0:16,0:16:48.16:0,48,885	0/0:25,1:26:4.58:0,5,1313	0/0:19,0:19:54.18:0,54,966	0/0:18,0:18:54.17:0,54,969	0/0:22,0:22:63.22:0,63,1174	0/0:23,0:23:69.22:0,69,1253	0/0:21,0:21:63.22:0,63,1174	1/1:1,20:22:54.19:1321,54,0	0/0:14,0:14:42.13:0,42,753	0/0:35,0:35:99:0,102,1900	0/0:23,0:23:69.24:0,69,1287	0/0:19,0:19:48.12:0,48,894	0/0:11,0:11:30.10:0,30,559	0/0:37,0:37:99:0,108,2000	1/1:0,15:17:42.14:1033,42,0	0/0:17,0:17:51.16:0,51,919	0/0:31,0:31:93.24:0,93,1634	0/0:26,0:26:78.27:0,78,1424	0/1:2,20:23:42.67:1458,0,43	0/0:23,0:22:69.24:0,69,1267	1/1:0,10:10:30.10:739,30,0
chr10	103975850	.	CAG	C	3560.16	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.131;DP=516;FS=2.028;HRun=0;HaplotypeScore=61.3262;InbreedingCoeff=0.9914;MQ=99.98;MQ0=0;MQRankSum=-1.819;QD=36.70;ReadPosRankSum=1.214;VQSLOD=5.6658;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,2202	0/0:9,0:9:27.09:0,27,478	0/0:24,0:24:62.25:0,62,1037	0/0:32,0:32:87.26:0,87,1560	0/0:17,0:17:42.14:0,42,784	0/0:20,0:20:51.17:0,51,955	0/0:17,0:17:51.16:0,51,911	1/1:1,17:18:51.13:692,51,0	0/0:15,0:15:45.15:0,45,831	0/0:21,0:21:60.20:0,60,1094	0/0:10,0:10:30.09:0,30,514	0/0:22,0:22:63.20:0,63,1149	0/0:16,0:16:48.16:0,48,897	0/0:13,0:13:39.13:0,39,730	0/0:17,0:17:51.16:0,51,924	0/0:18,0:18:54.17:0,54,980	0/0:31,0:31:84.29:0,84,1556	0/0:18,0:18:54.14:0,54,945	1/1:1,17:18:51.17:749,51,0	1/1:2,7:9:21.07:309,21,0	1/1:0,37:37:84.28:1236,84,0	0/0:14,0:14:36.12:0,36,672	0/0:14,0:14:36.11:0,36,641	0/0:13,0:13:36.12:0,36,674	0/0:16,0:16:48.16:0,48,898	0/0:16,0:16:45.13:0,45,756	1/1:1,14:15:39.13:574,39,0	0/0:4,0:4:12.04:0,12,217
chr10	103976258	.	T	TC	5876.69	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-2.199;DP=581;FS=9.399;HRun=3;HaplotypeScore=70.7988;InbreedingCoeff=0.9820;MQ=93.97;MQ0=0;MQRankSum=-4.287;QD=31.43;ReadPosRankSum=-0.859;VQSLOD=4.1733;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.20:0,75,877	0/0:4,0:4:9.03:0,9,108	0/0:20,0:20:60.17:0,60,696	0/0:30,0:30:80.27:0,80,876	1/1:1,10:11:27.09:376,27,0	0/0:19,0:19:57.17:0,57,677	0/0:31,0:31:93.27:0,93,1103	1/1:2,15:17:42.13:570,42,0	0/0:25,0:25:63.17:0,63,742	0/0:15,0:15:39.11:0,39,455	0/0:10,0:10:21.06:0,21,252	0/0:28,0:28:81.25:0,81,969	0/0:26,0:26:75.11:0,75,866	0/0:30,0:30:84.26:0,84,1007	1/1:1,29:30:78.26:1087,78,0	0/0:15,0:15:42.10:0,42,481	0/0:30,0:29:84.26:0,84,1007	0/0:21,0:21:60.18:0,60,719	1/1:3,15:18:45.11:589,45,0	1/1:2,8:10:12.04:168,12,0	1/1:4,42:45:99:1386,99,0	1/1:2,10:12:18.06:252,18,0	0/0:9,0:9:24.07:0,24,287	0/0:35,0:35:99:0,99,1187	0/0:18,0:18:51.15:0,51,601	1/1:2,21:24:27.14:735,27,0	1/1:0,14:14:36.06:504,36,0	1/1:0,5:5:15.05:210,15,0
chr10	103976469	.	GC	G	2504.16	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.455;DP=690;FS=0.444;HRun=4;HaplotypeScore=72.2681;InbreedingCoeff=0.9889;MQ=84.74;MQ0=0;MQRankSum=-0.862;QD=28.78;ReadPosRankSum=1.176;VQSLOD=3.3221;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,169,2314	0/0:5,0:5:15.05:0,15,210	0/0:22,0:22:57.18:0,57,765	0/0:24,0:24:63.18:0,63,826	1/1:0,20:20:57.13:668,57,0	0/0:23,0:23:63.20:0,63,865	0/0:25,0:25:69.20:0,69,930	0/0:18,0:18:42.14:0,42,588	0/0:24,0:24:72.24:0,72,1007	0/0:30,0:30:83.91:0,84,1119	0/0:25,0:25:66.21:0,66,906	0/0:28,0:28:84.24:0,84,1123	0/0:24,0:24:72.23:0,72,984	0/0:29,0:29:87.28:0,87,1199	1/1:0,20:20:57.17:684,57,0	0/0:25,0:25:75.25:0,75,1049	0/0:35,0:35:99:0,105,1469	0/0:30,0:30:81.27:0,81,1133	0/0:16,0:16:48.16:0,48,671	0/0:19,0:19:54.16:0,54,722	0/0:48,0:48:99:0,135,1829	1/1:1,14:15:36.11:432,36,0	0/0:18,0:18:51.13:0,51,662	0/0:31,0:31:90.27:0,90,1224	0/0:23,0:23:69.23:0,69,954	1/1:2,24:26:27.53:750,28,0	0/0:23,0:23:66.22:0,66,924	1/1:0,6:6:12.04:144,12,0
chr10	103977300	.	C	CTG	541.39	PASS	AB=0.790;AC=3;AF=0.054;AN=56;BaseQRankSum=6.719;DP=771;FS=6.584;HRun=0;HaplotypeScore=144.3762;InbreedingCoeff=-0.0588;MQ=52.24;MQ0=24;MQRankSum=-3.906;QD=6.77;ReadPosRankSum=-2.438;VQSLOD=2.3639;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:49:99:0,126,1771	0/0:12,0:11:33.11:0,33,505	0/0:14,0:5:12.04:0,12,174	0/0:19,0:10:24.03:0,24,289	0/0:22,6:21:17.96:0,18,238	0/0:27,0:26:52.43:0,52,991	0/0:26,0:26:75.24:0,75,1126	0/0:41,0:30:80.21:0,80,1181	0/0:30,0:30:87.27:0,87,1277	0/0:25,0:25:66.22:0,66,1009	0/0:18,0:18:42.14:0,42,639	0/0:28,0:28:81.28:0,81,1238	0/0:30,0:30:84.22:0,84,1210	0/0:29,0:28:84.20:0,84,1176	0/1:19,18:35:99:144,0,279	0/0:28,0:27:78.26:0,78,1188	0/0:38,0:38:98.32:0,98,1410	0/0:27,0:27:78.19:0,78,1119	0/0:18,0:17:48.07:0,48,643	0/0:27,0:27:49.48:0,49,685	0/0:36,0:32:50.80:0,51,746	0/0:23,13:34:15.27:0,15,199	0/0:25,0:25:60.12:0,60,789	0/0:37,0:37:84.52:0,85,1241	0/0:17,0:16:45.15:0,45,688	0/1:22,8:28:99:389,0,454	0/0:24,0:24:45.13:0,45,657	0/1:11,1:12:99:108,0,118
chr10	103977310	.	CTGTCTCTG	C	409.64	PASS	AB=0.854;AC=5;AF=0.089;AN=56;BaseQRankSum=3.204;DP=798;FS=0.000;HRun=0;HaplotypeScore=228.2683;InbreedingCoeff=-0.0991;MQ=52.52;MQ0=21;MQRankSum=-1.624;QD=2.66;ReadPosRankSum=-2.350;VQSLOD=1.9373;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:49:99:0,126,4297	0/0:15,0:14:42.14:0,42,1303	0/0:7,0:5:15.05:0,15,331	0/0:19,0:9:17.13:0,17,363	0/1:24,0:24:34.55:35,0,77	0/0:27,0:26:72.66:0,73,2603	0/0:32,0:32:93.30:0,93,3201	0/0:42,0:30:78.39:0,78,968	0/0:34,0:34:96.33:0,96,3357	0/0:27,0:26:78.26:0,78,2745	0/0:25,0:25:66.21:0,66,2086	0/0:28,0:28:84.27:0,84,3231	0/0:27,0:27:81.26:0,81,3239	0/0:26,0:25:75.24:0,75,2630	0/1:35,0:36:83.82:84,0,361	0/0:28,0:27:81.26:0,81,2956	0/0:35,0:35:77.69:0,78,3387	0/0:28,0:28:76.01:0,76,2322	0/0:20,0:18:40.02:0,40,680	0/0:23,0:23:47.88:0,48,739	0/0:43,0:39:61.19:0,61,1039	0/1:22,15:36:30.80:31,0,56	0/0:26,0:26:65.62:0,66,2001	0/0:40,0:40:99:0,100,3317	0/0:19,0:18:51.15:0,51,1667	0/1:30,0:33:99:298,0,663	0/0:21,0:21:36.07:0,36,915	0/1:11,0:12:80.06:80,0,165
chr10	103977312	.	G	GTC	525.46	PASS	AB=0.991;AC=14;AF=0.250;AN=56;BaseQRankSum=11.308;DP=795;FS=1.537;HRun=0;HaplotypeScore=157.5642;InbreedingCoeff=0.2869;MQ=53.29;MQ0=21;MQRankSum=-1.909;QD=1.77;ReadPosRankSum=-1.850;VQSLOD=2.2015;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:48:99:0,114,1543	0/0:15,0:14:39.10:0,39,500	0/0:8,0:5:15.02:0,15,173	0/0:17,1:9:14.70:0,15,178	1/1:31,2:27:0.92:69,1,0	0/0:27,0:26:62.95:0,63,865	0/0:32,0:32:87.29:0,87,1193	0/1:40,0:28:32.02:113,0,32	0/0:33,0:33:90.28:0,90,1218	0/0:29,0:28:78.21:0,78,1023	0/0:25,0:25:63.21:0,63,845	0/0:30,0:30:87.23:0,87,1154	0/0:27,0:27:75.24:0,75,1014	0/0:26,0:25:69.21:0,69,927	0/1:37,0:35:3.65:4,0,87	0/0:28,0:27:75.25:0,75,1028	0/0:35,0:35:88.84:0,89,1197	0/0:28,0:28:68.97:0,69,860	1/1:16,0:14:1.22:21,1,0	1/1:21,0:21:15.95:44,16,0	0/1:43,0:39:60.06:60,0,84	1/1:26,11:35:3.83:34,4,0	0/0:26,0:26:60.20:0,60,815	0/0:40,0:40:79.50:0,79,1185	0/0:20,0:19:44.98:0,45,558	0/1:35,2:34:99:256,0,107	0/1:21,0:21:24.61:25,0,25	0/1:12,0:12:54.31:54,0,65
chr10	103977314	.	C	CTG	572.49	PASS	AB=0.913;AC=6;AF=0.107;AN=56;BaseQRankSum=7.317;DP=801;FS=6.773;HRun=0;HaplotypeScore=157.7686;InbreedingCoeff=0.1923;MQ=54.09;MQ0=21;MQRankSum=-0.670;QD=3.67;ReadPosRankSum=-1.578;VQSLOD=1.9133;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:47:99:0,123,1813	0/0:15,0:14:42.13:0,42,618	0/0:9,0:6:18.06:0,18,269	0/0:21,0:10:17.83:0,18,246	0/1:28,4:26:59.25:134,0,59	0/0:27,0:26:71.88:0,72,1030	0/0:34,0:34:90.29:0,90,1356	0/0:40,0:28:58.90:0,59,388	0/0:34,0:34:99:0,99,1447	0/0:29,0:28:81.27:0,81,1217	0/0:24,0:24:63.21:0,63,962	0/0:30,0:30:87.30:0,87,1326	0/0:26,0:26:78.25:0,78,1170	0/0:28,0:27:81.21:0,81,1145	0/1:32,5:35:45:45,0,289	0/0:28,0:27:81.23:0,81,1195	0/0:34,0:34:78.01:0,78,1319	0/0:28,0:28:74.34:0,74,1021	0/0:17,0:15:38.10:0,38,284	0/0:21,0:21:44.62:0,45,316	0/0:43,0:39:51.91:0,52,434	1/1:34,3:35:5.90:76,6,0	0/0:25,0:25:60.20:0,60,917	0/0:40,0:40:96.51:0,97,1413	0/0:21,0:20:51.14:0,51,726	0/1:33,5:35:99:426,0,492	0/0:22,0:22:35.60:0,36,265	0/1:12,0:12:12.52:13,0,153
chr10	103977318	.	G	GTC	4336.62	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=-4.951;DP=808;FS=0.388;HRun=0;HaplotypeScore=146.7872;InbreedingCoeff=0.7366;MQ=55.16;MQ0=20;MQRankSum=-3.680;QD=14.41;ReadPosRankSum=-3.640;VQSLOD=4.0655;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:46:99:0,111,1517	0/0:14,0:13:33.10:0,33,436	0/0:10,0:8:20.89:0,21,235	0/0:22,0:12:20.42:0,20,238	1/1:33,0:27:3.90:93,4,0	0/0:26,0:25:64.36:0,64,882	0/0:32,0:32:90.09:0,90,1205	1/1:16,26:30:78.24:1190,78,0	0/0:33,0:33:93.27:0,93,1232	0/0:31,0:30:77:0,77,1075	0/0:24,0:24:63.21:0,63,857	0/0:30,0:30:81.27:0,81,1108	0/0:27,0:27:81.21:0,81,1074	0/0:28,0:27:78.24:0,78,1046	0/1:39,0:37:51.47:51,0,63	0/0:29,0:28:84.24:0,84,1115	0/0:33,0:33:82.15:0,82,1106	0/0:26,0:26:56.13:0,56,873	1/1:4,13:14:36.12:599,36,0	1/1:1,18:20:39.13:657,39,0	1/1:11,36:43:51.11:868,51,0	1/1:37,0:35:4.98:39,5,0	0/0:25,0:25:54.10:0,54,724	0/0:42,0:42:92.21:0,92,1208	0/0:17,0:16:48.14:0,48,638	0/1:40,0:37:99:251,0,160	1/1:2,24:26:36.05:588,36,0	0/0:10,0:10:0.79:0,1,67
chr10	103980202	.	AAAAG	A	1635.80	PASS	AB=0.981;AC=15;AF=0.278;AN=54;BaseQRankSum=8.627;DP=489;FS=1.656;HRun=0;HaplotypeScore=93.5529;InbreedingCoeff=0.3938;MQ=50.75;MQ0=12;MQRankSum=-4.395;QD=9.14;ReadPosRankSum=-6.166;VQSLOD=0.1600;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:36:69.20:0,69,1292	0/0:7,0:7:9.03:0,9,177	./.	0/1:3,0:1:0:0,0,0	1/1:27,6:30:65.56:609,66,0	0/0:16,0:15:38.69:0,39,569	0/0:13,0:13:18.04:0,18,344	0/1:24,0:19:20.53:21,0,90	0/0:10,0:10:21.07:0,21,441	0/0:23,0:21:47.75:0,48,808	0/0:15,0:15:35.75:0,36,554	0/0:11,0:11:15.04:0,15,207	0/0:16,0:16:39.12:0,39,768	0/0:17,0:17:32.83:0,33,597	1/1:6,3:9:21.01:239,21,0	0/0:11,0:11:21.07:0,21,423	0/0:31,0:30:60.19:0,60,1181	0/0:37,0:36:66.21:0,66,1190	0/1:15,0:13:27.90:28,0,66	0/1:26,0:21:99:100,0,104	0/1:3,0:3:8.93:21,0,9	1/1:18,5:22:29.84:326,30,0	0/0:18,0:18:33.09:0,33,583	0/0:13,0:13:24.02:0,24,402	0/0:25,0:24:59.15:0,59,1066	0/1:17,3:19:21.91:300,0,22	0/1:19,0:19:61.34:120,0,61	1/1:4,0:4:5.96:43,6,0
chr10	103980203	.	AAAG	A	1488.65	PASS	AB=0.981;AC=15;AF=0.268;AN=56;BaseQRankSum=10.541;DP=495;FS=3.405;HRun=0;HaplotypeScore=85.7406;InbreedingCoeff=0.2009;MQ=50.89;MQ0=12;MQRankSum=-5.422;QD=7.96;ReadPosRankSum=-5.292;VQSLOD=0.2497;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:36:84.88:0,85,1161	0/1:7,0:7:10.65:11,0,182	0/0:8,0:1:2.60:0,3,10	0/1:4,0:1:0:0,0,0	0/1:30,3:30:4.72:400,0,5	0/0:16,0:15:41.51:0,42,503	0/0:13,0:13:35.86:0,36,438	0/1:22,0:17:11.52:49,0,12	0/0:11,0:11:30.02:0,30,430	0/0:24,0:22:59.09:0,59,798	0/0:16,0:16:39.19:0,39,551	0/0:12,0:12:26.90:0,27,239	0/0:16,0:16:42.09:0,42,695	0/0:17,0:17:35.58:0,36,558	0/1:9,0:9:14.18:151,0,14	0/0:11,0:11:2.22:0,2,358	0/0:31,0:30:56.21:0,56,1116	0/0:38,0:37:95.56:0,96,1221	0/1:15,0:13:16.99:92,0,17	0/1:26,0:21:9.67:124,0,10	1/1:3,0:3:2.94:26,3,0	0/1:22,1:22:20.80:224,0,21	0/0:17,0:17:41.94:0,42,569	0/0:13,0:13:29.85:0,30,424	0/0:26,0:25:60.65:0,61,920	0/1:19,1:19:21.04:310,0,21	1/1:21,0:20:21.95:217,22,0	1/1:4,0:4:5.96:43,6,0
chr10	103980205	.	AG	A	2267.55	PASS	AB=0.992;AC=18;AF=0.321;AN=56;BaseQRankSum=10.588;DP=494;FS=0.404;HRun=1;HaplotypeScore=67.3188;InbreedingCoeff=0.6244;MQ=51.27;MQ0=8;MQRankSum=-7.522;QD=12.74;ReadPosRankSum=-5.059;VQSLOD=0.3440;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:62.77:0,63,743	0/0:8,0:8:11.73:0,12,128	0/0:9,0:2:5.99:0,6,57	0/1:5,0:1:0:0,0,0	0/1:31,1:30:20.97:337,0,21	0/0:17,0:16:23.61:0,24,341	0/0:13,0:13:36:0,36,381	1/1:15,8:18:44.68:374,45,0	0/0:11,0:11:30.02:0,30,299	0/0:23,0:23:61.41:0,61,572	0/0:15,0:15:38.62:0,39,364	0/0:12,0:12:19.92:0,20,172	0/0:16,0:16:41.75:0,42,398	0/0:16,0:16:34.83:0,35,345	0/1:10,0:10:33.15:116,0,33	0/0:11,0:11:21.57:0,22,240	0/0:31,0:30:76.46:0,76,778	0/0:39,0:38:90.74:0,91,852	1/1:14,2:14:23.28:222,23,0	1/1:16,9:20:52.32:476,52,0	1/1:2,1:3:6.01:65,6,0	0/1:21,0:20:58.77:114,0,59	0/0:17,0:17:38.35:0,38,340	0/0:12,0:12:30.31:0,30,306	0/0:27,0:26:57.99:0,58,528	1/1:19,0:19:0.28:229,0,0	1/1:17,4:20:53.89:476,54,0	1/1:3,0:3:5.96:43,6,0
chr10	103980232	.	GAAA	G	2477.27	PASS	AB=0.585;AC=11;AF=0.196;AN=56;BaseQRankSum=7.533;DP=543;FS=2.194;HRun=12;HaplotypeScore=96.9355;InbreedingCoeff=0.8112;MQ=54.76;MQ0=12;MQRankSum=-4.941;QD=21.36;ReadPosRankSum=1.567;VQSLOD=2.7934;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,102,1643	0/0:7,0:7:21.07:0,21,396	0/0:14,0:3:8.90:0,9,133	0/0:15,0:5:8.43:0,8,53	1/1:10,24:32:78.20:974,78,0	0/0:20,0:19:48.14:0,48,880	0/0:12,0:13:33.10:0,33,557	0/0:13,0:20:18.07:0,18,72	0/0:12,0:13:39.11:0,39,733	0/0:24,0:26:63.17:0,63,1074	0/0:17,0:19:55.36:0,55,808	0/0:9,0:10:21.06:0,21,340	0/0:17,0:18:45.13:0,45,762	0/0:24,0:24:60.06:0,60,949	1/1:1,11:12:30.01:355,30,0	0/0:10,0:10:26.57:0,27,429	0/0:24,0:26:75.23:0,75,1347	0/0:38,0:37:90.25:0,90,1544	0/1:7,1:23:9.06:9,0,60	0/0:7,0:17:20.40:0,20,72	0/0:1,0:7:4.98:0,5,11	1/1:3,14:17:39.11:480,39,0	0/0:14,0:13:39.11:0,39,664	0/0:14,0:14:39.12:0,39,675	0/0:31,0:31:84.23:0,84,1512	1/1:4,20:24:6.99:715,7,0	0/0:4,0:19:16.72:0,17,37	1/1:0,5:5:9.03:113,9,0
chr10	103981122	.	GCA	G	307.41	PASS	AB=0.891;AC=17;AF=0.340;AN=50;BaseQRankSum=5.330;DP=629;FS=5.637;HRun=0;HaplotypeScore=95.5140;InbreedingCoeff=-0.0186;MQ=67.50;MQ0=9;MQRankSum=-1.810;QD=1.06;ReadPosRankSum=0.131;VQSLOD=1.4993;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:47:3.27:0,3,409	0/1:10,2:12:20.28:20,0,121	./.	./.	0/0:9,0:15:1.33:0,1,44	0/1:10,2:12:23.30:23,0,80	0/1:30,4:34:49.08:49,0,456	./.	0/1:12,2:16:16.32:16,0,303	0/0:21,0:21:24.06:0,24,307	0/0:6,0:7:9:0,9,93	0/1:20,1:23:43.63:44,0,123	0/1:15,2:18:25.39:25,0,200	0/1:25,3:28:57.90:58,0,322	0/0:24,0:24:18.01:0,18,183	0/0:19,0:19:18.06:0,18,263	0/1:37,3:38:10.48:10,0,631	0/0:16,0:17:16.84:0,17,369	1/1:10,0:11:2.84:14,3,0	1/1:8,0:11:8.52:42,9,0	1/1:33,0:35:2.84:14,3,0	0/0:10,0:17:6.66:0,7,75	0/1:21,1:23:17.34:17,0,158	0/0:35,1:36:0.41:0,0,391	0/0:13,0:13:6.01:0,6,69	0/0:13,0:22:27.58:0,28,290	1/1:14,0:26:25.52:124,26,0	0/0:2,0:9:3:0,3,26
chr10	103983181	.	C	CA	1718.34	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-3.525;DP=585;FS=5.308;HRun=6;HaplotypeScore=85.4300;InbreedingCoeff=0.8833;MQ=56.25;MQ0=11;MQRankSum=-2.689;QD=14.69;ReadPosRankSum=-1.907;VQSLOD=3.1012;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:92.82:0,93,928	0/0:6,0:6:12.02:0,12,122	0/1:21,0:2:1.30:1,0,16	0/0:20,0:8:2.09:0,2,79	0/0:28,0:27:48.10:0,48,489	0/0:14,0:14:30.05:0,30,299	0/0:25,1:26:62.88:0,63,629	1/1:10,20:30:56.71:635,57,0	0/0:20,0:20:51.07:0,51,507	0/0:25,0:24:66.15:0,66,672	0/0:19,0:19:42.09:0,42,428	0/0:25,0:25:57.09:0,57,567	0/0:16,0:16:35.93:0,36,366	0/0:15,0:15:27.05:0,27,274	0/0:21,0:20:48.02:0,48,467	0/0:18,0:18:42.08:0,42,422	0/0:34,0:34:78.02:0,78,779	0/0:18,0:18:42.02:0,42,409	1/1:7,9:14:27.08:334,27,0	1/1:5,13:17:32.89:415,33,0	1/1:3,7:10:18.06:226,18,0	0/0:23,0:23:39.03:0,39,372	0/0:24,0:23:57.12:0,57,575	0/0:24,0:24:48.09:0,48,489	0/0:20,0:20:45.09:0,45,457	0/0:17,0:16:37.13:0,37,393	1/1:8,13:21:23.83:279,24,0	0/0:17,0:16:39.08:0,39,398
chr10	103983192	.	AAAAAG	A	1630.67	PASS	AB=0.975;AC=10;AF=0.179;AN=56;BaseQRankSum=5.704;DP=568;FS=24.718;HRun=0;HaplotypeScore=115.6081;InbreedingCoeff=0.7349;MQ=55.53;MQ0=6;MQRankSum=-3.366;QD=13.59;ReadPosRankSum=-1.322;VQSLOD=1.4160;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:93.23:0,93,2047	0/0:4,0:4:9:0,9,245	0/0:21,0:2:5.81:0,6,52	0/1:20,0:10:7.41:7,0,154	1/1:21,3:24:52.59:558,53,0	0/0:13,0:13:39.13:0,39,889	0/0:23,0:23:65.41:0,65,1323	0/0:29,0:29:55.60:0,56,1276	0/0:18,0:18:48.15:0,48,1074	0/0:32,0:31:78.09:0,78,1470	0/0:21,0:21:56.78:0,57,1186	0/0:23,0:23:60.10:0,60,1322	0/0:19,0:19:45.86:0,46,949	0/0:16,0:16:32.96:0,33,789	1/1:18,1:18:31.05:344,31,0	0/0:18,0:18:13.99:0,14,704	0/0:31,0:31:81.08:0,81,1547	0/0:16,0:16:45.02:0,45,976	0/0:19,0:17:51.11:0,51,1008	0/0:16,0:15:36.51:0,37,739	0/0:11,0:11:24.04:0,24,512	1/1:19,1:20:28.72:298,29,0	0/0:20,0:19:54.14:0,54,1123	0/0:21,0:21:53.46:0,53,1170	0/0:23,0:23:66.20:0,66,1412	0/1:18,1:18:51.66:254,0,52	0/0:15,0:15:32.96:0,33,758	1/1:18,0:17:31.48:337,31,0
chr10	103983193	.	AAAAG	A	2536.62	PASS	AB=0.958;AC=9;AF=0.161;AN=56;BaseQRankSum=2.436;DP=569;FS=17.314;HRun=0;HaplotypeScore=102.8092;InbreedingCoeff=0.8210;MQ=56.66;MQ0=6;MQRankSum=-3.949;QD=24.16;ReadPosRankSum=-2.759;VQSLOD=1.7902;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:93.08:0,93,1711	0/0:4,0:4:8.99:0,9,205	0/0:23,0:3:5.77:0,6,54	0/0:20,0:11:11.04:0,11,148	1/1:20,6:26:57.56:749,58,0	0/0:13,0:13:39.13:0,39,741	0/0:23,0:23:56.51:0,57,1091	0/0:28,0:29:64.14:0,64,1134	0/0:18,0:18:48.15:0,48,894	0/0:32,0:31:78.06:0,78,1254	0/0:21,0:21:53.54:0,54,1003	0/0:21,0:21:60.12:0,60,1121	0/0:19,0:19:45.87:0,46,795	0/0:16,0:16:38.79:0,39,673	1/1:14,5:18:47.90:527,48,0	0/0:17,0:17:18.60:0,19,616	0/0:30,0:30:81.16:0,81,1320	0/0:16,0:16:41.20:0,41,800	0/0:19,0:17:51.11:0,51,886	0/0:15,0:15:36.11:0,36,622	0/0:10,0:10:24.04:0,24,426	1/1:8,10:18:33.23:477,33,0	0/0:20,0:19:54.09:0,54,902	0/0:20,0:20:53.98:0,54,990	0/0:23,0:23:66.16:0,66,1197	0/1:22,1:22:19.66:412,0,20	0/0:15,0:15:33.10:0,33,644	1/1:15,4:18:50.34:536,50,0
chr10	103983194	.	AAAG	A	2237.34	PASS	AB=0.917;AC=9;AF=0.161;AN=56;BaseQRankSum=3.231;DP=568;FS=8.353;HRun=0;HaplotypeScore=93.9564;InbreedingCoeff=0.8601;MQ=56.62;MQ0=6;MQRankSum=-3.245;QD=21.51;ReadPosRankSum=-3.992;VQSLOD=1.6214;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:94.34:0,94,1404	0/0:4,0:4:8.98:0,9,167	0/0:24,0:3:4.20:0,4,35	0/0:21,0:11:11.57:0,12,120	1/1:26,1:27:62.04:648,62,0	0/0:13,0:13:39.05:0,39,599	0/0:23,0:23:56.24:0,56,883	0/0:30,0:30:67.49:0,67,936	0/0:18,0:18:48.13:0,48,740	0/0:30,0:29:76.25:0,76,1076	0/0:21,0:21:50.22:0,50,830	0/0:21,0:21:60.04:0,60,910	0/0:21,0:21:45.75:0,46,669	0/0:16,0:16:38.32:0,38,543	1/1:19,0:18:47.18:476,47,0	0/0:17,0:17:17.14:0,17,499	0/0:30,0:30:81.05:0,81,1122	0/0:15,0:15:41.09:0,41,657	0/0:20,0:18:53.92:0,54,782	0/0:15,0:15:34.06:0,34,528	0/0:10,0:10:24.01:0,24,357	1/1:17,0:17:35.67:363,36,0	0/0:19,0:18:54.09:0,54,786	0/0:19,0:19:53.86:0,54,792	0/0:23,0:23:62.99:0,63,956	0/1:20,2:21:2.80:424,0,3	0/0:15,0:15:32.86:0,33,523	1/1:18,1:18:46.32:490,46,0
chr10	103983196	.	AG	A	2005.71	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.136;DP=572;FS=2.334;HRun=1;HaplotypeScore=75.8695;InbreedingCoeff=0.8443;MQ=56.80;MQ0=6;MQRankSum=-2.738;QD=19.10;ReadPosRankSum=-4.080;VQSLOD=2.7426;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:68.74:0,69,775	0/0:3,0:3:9.02:0,9,98	0/0:23,0:3:4.14:0,4,34	0/0:18,0:11:1.86:0,2,57	1/1:22,4:26:62.60:550,63,0	0/0:13,0:13:27.38:0,27,316	0/0:23,0:23:31.18:0,31,437	0/0:31,0:31:56.25:0,56,573	0/0:20,0:20:51.54:0,52,443	0/0:31,0:30:43.35:0,43,628	0/0:21,0:21:28.93:0,29,456	0/0:20,0:20:55.67:0,56,524	0/0:19,0:19:20.69:0,21,355	0/0:16,0:16:9.56:0,10,251	1/1:16,3:18:50.19:403,50,0	0/0:17,0:17:1.95:0,2,269	0/0:30,0:30:65.58:0,66,616	0/0:15,0:15:35.99:0,36,371	0/0:23,0:21:62.36:0,62,578	0/0:17,0:17:10.73:0,11,343	0/0:9,0:9:22.27:0,22,213	1/1:11,5:16:38.80:318,39,0	0/0:19,0:18:52.16:0,52,488	0/0:20,0:20:49.47:0,49,429	0/0:23,0:23:42.11:0,42,516	1/1:24,0:23:30.01:472,30,0	0/0:16,0:16:13.41:0,13,288	1/1:18,2:19:53.31:435,53,0
chr10	103983863	.	GC	G	3825.04	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.605;DP=694;FS=9.887;HRun=2;HaplotypeScore=66.6523;InbreedingCoeff=0.9997;MQ=78.15;MQ0=0;MQRankSum=-2.681;QD=36.78;ReadPosRankSum=4.530;VQSLOD=3.8139;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,153,2218	0/0:9,0:9:27.06:0,27,380	0/0:13,0:13:39.01:0,39,463	0/0:19,0:19:53.33:0,53,587	1/1:1,17:18:48.16:623,48,0	0/0:27,0:27:81.26:0,81,1193	0/0:23,0:23:69.23:0,69,1031	0/0:36,0:36:99:0,108,1561	0/0:27,0:27:81.26:0,81,1190	0/0:26,0:26:78.26:0,78,1167	0/0:22,0:22:66.22:0,66,977	0/0:29,0:29:87.27:0,87,1264	0/0:27,0:27:81.26:0,81,1186	0/0:41,0:41:99:0,123,1783	1/1:0,30:30:81.26:1052,81,0	0/0:22,0:22:66.22:0,66,988	0/0:31,0:31:93.32:0,93,1393	0/0:13,0:13:39.13:0,39,584	0/0:25,0:25:72.06:0,72,1010	0/0:22,0:22:66.22:0,66,989	0/0:33,0:33:99:0,99,1415	1/1:0,14:14:42.14:545,42,0	0/0:13,0:13:39.13:0,39,583	0/0:36,0:36:99:0,108,1531	0/0:29,0:29:87.27:0,87,1263	1/1:0,27:27:81.23:1021,81,0	0/0:16,0:15:48.14:0,48,694	1/1:0,15:15:45.15:584,45,0
chr10	103984210	.	G	GGGC	2429.91	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-5.714;DP=495;FS=5.314;HRun=0;HaplotypeScore=87.1691;InbreedingCoeff=0.9839;MQ=79.43;MQ0=0;MQRankSum=-1.636;QD=32.40;ReadPosRankSum=2.448;VQSLOD=3.7088;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1302	0/0:7,0:7:18.02:0,18,195	0/0:20,0:20:21.75:0,22,357	0/0:15,0:15:22.86:0,23,266	1/1:1,8:11:23.86:407,24,0	0/0:18,0:18:51.13:0,51,759	0/0:17,0:17:47.77:0,48,585	0/0:19,0:19:54.11:0,54,626	0/0:14,0:14:36.10:0,36,513	0/0:26,0:26:57.11:0,57,687	0/0:15,0:15:35.34:0,35,418	0/0:16,0:16:42.08:0,42,543	0/0:24,0:24:68.90:0,69,815	0/0:16,0:16:42.11:0,42,601	1/1:2,11:14:29.88:540,30,0	0/0:15,0:15:42.12:0,42,606	0/0:17,0:17:41.62:0,42,369	0/0:20,0:20:16.21:0,16,284	0/0:16,0:16:42.04:0,42,499	0/0:8,0:8:21.07:0,21,324	0/0:20,0:20:54.06:0,54,707	1/1:1,14:17:30.10:628,30,0	0/0:12,0:12:21.05:0,21,283	0/0:23,0:23:63.11:0,63,838	0/0:20,0:20:54.09:0,54,688	1/1:5,17:25:53.72:776,54,0	0/0:22,0:22:56.56:0,57,745	1/1:0,5:8:12.04:252,12,0
chr10	103986009	.	C	CGCACGCACGCAC	797.26	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=2.123;DP=413;FS=13.662;HRun=0;HaplotypeScore=209.3772;InbreedingCoeff=0.2108;MQ=51.11;MQ0=2;MQRankSum=-2.943;QD=3.95;ReadPosRankSum=-0.400;VQSLOD=1.6598;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:5.87:0,6,103	0/0:9,0:9:9.02:0,9,167	0/1:18,0:11:0.82:1,0,299	0/0:14,0:12:23.96:0,24,466	0/0:6,0:6:1.25:0,1,3	0/0:20,0:19:24.05:0,24,444	0/0:20,0:20:12.51:0,13,282	0/1:16,0:16:7.52:8,0,85	0/0:25,0:25:1.44:0,1,323	0/1:14,0:14:25.96:26,0,345	0/0:5,0:5:3.48:0,3,40	0/0:21,0:21:6.10:0,6,95	0/0:24,0:24:21.04:0,21,460	1/1:24,0:24:6.01:79,6,0	1/1:14,0:14:6.02:212,6,0	0/0:19,0:19:8.25:0,8,168	0/1:18,0:18:92.22:92,0,191	0/1:9,0:9:38.54:39,0,209	1/1:14,0:12:2.12:47,2,0	0/0:9,0:9:0.89:0,1,3	0/1:32,0:32:41.66:42,0,88	1/1:12,0:12:11.40:83,11,0	1/1:6,0:6:0.47:1,0,0	0/0:13,0:13:12.04:0,12,247	0/0:14,0:14:6.02:0,6,132	1/1:13,0:13:1.53:79,2,0	0/1:4,0:4:8.65:18,0,9	1/1:2,3:8:6.02:226,6,0
chr10	103986237	.	A	AT	5161.57	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-4.574;DP=643;FS=8.742;HRun=4;HaplotypeScore=68.4504;InbreedingCoeff=0.9955;MQ=84.94;MQ0=0;MQRankSum=-0.414;QD=34.88;ReadPosRankSum=-2.619;VQSLOD=4.0384;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,1313	0/0:7,0:7:18.05:0,18,204	0/0:26,0:26:71.84:0,72,779	0/0:21,0:21:54.15:0,54,612	0/0:16,0:16:45.11:0,45,500	0/0:30,0:30:84.22:0,84,942	0/0:31,0:31:84.22:0,84,942	1/1:4,22:26:66.21:887,66,0	0/0:31,0:31:84.22:0,84,942	0/0:16,0:16:45.13:0,45,510	0/0:9,0:9:24.07:0,24,272	0/0:18,0:18:54.15:0,54,612	0/0:22,0:22:57.15:0,57,636	0/0:17,0:17:48.14:0,48,543	0/0:24,0:24:72.21:0,72,817	0/0:14,0:14:39.11:0,39,442	0/0:35,0:34:99:0,99,1100	0/0:25,0:25:75.21:0,75,850	1/1:8,27:35:84.25:1116,84,0	1/1:1,10:11:27.09:369,27,0	1/1:3,57:60:99:2216,163,0	0/0:14,0:14:39.11:0,39,442	0/0:16,0:16:42.12:0,42,476	0/0:33,0:32:93.26:0,93,1055	0/0:25,0:24:69.15:0,69,760	0/0:17,0:17:48.14:0,48,545	1/1:0,16:16:42.14:574,42,0	0/0:6,0:6:18.05:0,18,204
chr10	103987681	.	T	TTCC	6418.85	PASS	AB=0.647;AC=17;AF=0.315;AN=54;BaseQRankSum=-7.147;DP=723;FS=2.213;HRun=0;HaplotypeScore=100.1235;InbreedingCoeff=0.9157;MQ=55.45;MQ0=30;MQRankSum=-2.264;QD=32.92;ReadPosRankSum=0.669;VQSLOD=5.3662;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:99:0,114,1682	0/0:9,0:9:27.09:0,27,402	0/0:45,0:10:18.06:0,18,256	0/0:70,0:16:20.52:0,21,216	1/1:3,15:19:36.03:568,36,0	0/0:28,0:27:78.23:0,78,1130	0/0:22,0:22:63.16:0,63,900	0/1:10,11:19:7.66:408,0,8	0/0:28,0:28:72.23:0,72,1060	0/0:24,0:24:63.20:0,63,915	0/0:24,0:24:69.21:0,69,995	0/0:21,0:21:51.16:0,51,743	0/0:25,0:25:69.23:0,69,1031	0/0:21,0:21:63.19:0,63,909	1/1:6,20:26:42.14:878,42,0	0/0:22,0:22:63.19:0,63,907	0/0:24,0:24:28.54:0,29,863	0/0:36,0:36:96.22:0,96,1362	1/1:17,0:16:15.05:253,15,0	./.	1/1:5,9:13:13.34:243,13,0	1/1:4,21:24:63.22:1292,63,0	0/0:18,0:17:39.09:0,39,559	0/0:34,0:34:71.97:0,72,1077	0/0:21,0:20:36.11:0,36,521	1/1:7,28:33:45.07:1501,45,0	1/1:12,2:15:15.44:402,15,0	1/1:1,18:20:42.14:875,42,0
chr10	103987684	.	CTCCTCCTCTTCCTCCTCCTTCTCTTTCTCCGCT	C	4491.92	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=1.566;DP=701;FS=7.393;HRun=0;HaplotypeScore=468.4362;InbreedingCoeff=0.5021;MQ=55.86;MQ0=29;MQRankSum=-2.140;QD=29.36;ReadPosRankSum=-5.344;VQSLOD=0.7866;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:99:0,117,8075	0/0:9,0:9:27.09:0,27,2014	0/0:39,0:8:21.07:0,21,890	0/0:69,0:17:28.53:0,29,553	0/1:20,0:20:79.36:79,0,1596	0/0:29,0:28:81.26:0,81,5630	0/0:23,0:23:66.23:0,66,4231	0/1:22,0:19:27.44:533,0,27	0/0:28,0:28:75.24:0,75,5156	0/0:24,0:24:69.23:0,69,4361	0/0:26,0:26:75.25:0,75,5485	0/0:19,0:19:51.17:0,51,3525	0/0:26,0:26:72.25:0,72,5266	0/0:21,0:21:63.19:0,63,4379	0/0:24,0:24:6.12:0,6,1920	0/0:22,0:22:63.20:0,63,4150	0/0:23,0:23:1.19:0,1,4539	0/0:35,0:35:96.22:0,96,5575	1/1:2,12:13:36.12:1240,36,0	1/1:0,10:10:12.04:315,12,0	1/1:13,0:12:18.06:696,18,0	0/1:24,0:23:8.69:9,0,3185	0/0:18,0:17:45.11:0,45,2712	0/0:32,0:32:80.57:0,81,5313	0/0:18,0:17:36.11:0,36,2562	0/1:36,0:33:99:125,0,3143	1/1:14,0:14:39.11:1495,39,0	0/0:20,0:20:3.43:0,3,1920
chr10	103987717	.	T	TTCC	2004.16	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.475;DP=670;FS=8.458;HRun=0;HaplotypeScore=121.2772;InbreedingCoeff=0.9676;MQ=67.54;MQ0=9;MQRankSum=-3.536;QD=33.97;ReadPosRankSum=-3.089;VQSLOD=2.8516;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:99:0,111,1558	0/0:10,0:10:29.77:0,30,416	0/0:33,0:17:30.97:0,31,380	0/0:55,0:27:6.40:0,6,273	0/0:17,0:17:45.15:0,45,674	0/0:35,0:35:90.28:0,90,1312	0/0:25,0:25:66.21:0,66,966	1/1:4,3:7:18.05:307,18,0	0/0:23,0:23:51.16:0,51,749	0/0:31,0:31:76.12:0,76,1082	0/0:24,0:24:66.17:0,66,931	0/0:19,0:19:48.16:0,48,719	0/0:25,0:25:72.22:0,72,1041	0/0:23,0:23:63.19:0,63,906	0/0:21,0:21:63.20:0,63,909	0/0:21,0:21:54.13:0,54,718	0/0:26,0:26:64.97:0,65,935	0/0:35,0:35:93.20:0,93,1304	1/1:13,0:12:25.90:509,26,0	1/1:10,0:10:12.04:238,12,0	1/1:4,9:13:29.93:556,30,0	0/0:27,0:27:66.20:0,66,952	0/0:26,0:26:78.23:0,78,1149	0/0:27,0:27:72.24:0,72,1082	0/0:22,0:22:60.18:0,60,845	0/0:22,0:22:57.19:0,57,836	1/1:3,11:16:27.09:566,27,0	0/0:19,0:19:42.11:0,42,589
chr10	103988860	.	G	GTTTGGT	4578.33	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-0.547;DP=636;FS=10.946;HRun=0;HaplotypeScore=126.9328;InbreedingCoeff=0.9597;MQ=74.87;MQ0=0;MQRankSum=-8.181;QD=40.88;ReadPosRankSum=-4.824;VQSLOD=3.0876;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,141,2951	0/0:10,0:10:18.06:0,18,372	0/0:23,0:22:26.37:0,26,542	0/0:18,0:18:21.07:0,21,434	0/0:23,0:23:66.19:0,66,1315	0/0:31,0:31:78.27:0,78,1652	0/0:22,0:22:51.17:0,51,1102	1/1:23,7:31:42.13:1248,42,0	0/0:21,0:21:48.16:0,48,1002	0/0:31,0:31:78.26:0,78,1611	0/0:14,0:14:39.13:0,39,843	0/0:26,0:26:54.18:0,54,1167	0/0:13,0:13:36.11:0,36,739	0/0:17,0:17:39.13:0,39,843	0/0:26,0:26:57.20:0,57,1216	0/0:19,0:19:48.16:0,48,1038	0/0:30,0:30:75.26:0,75,1582	0/0:15,0:15:42.14:0,42,872	1/1:14,4:21:5.21:717,5,0	1/1:5,12:18:42.10:1279,42,0	1/1:16,10:28:23.20:591,23,0	0/0:23,0:23:60.21:0,60,1297	0/0:17,0:17:51.18:0,51,1102	0/0:35,0:34:87.30:0,87,1858	0/0:18,0:18:45.15:0,45,958	0/0:27,0:27:66.22:0,66,1369	1/1:10,4:14:24.08:743,24,0	0/0:6,0:6:11.89:0,12,258
chr10	103989640	.	GCA	G	1311.71	PASS	AB=0.875;AC=18;AF=0.321;AN=56;BaseQRankSum=5.847;DP=451;FS=0.000;HRun=0;HaplotypeScore=58.4736;InbreedingCoeff=0.1315;MQ=70.12;MQ0=7;MQRankSum=0.592;QD=6.25;ReadPosRankSum=0.255;VQSLOD=2.7426;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:5.87:0,6,445	0/1:5,0:5:40.88:41,0,121	0/0:31,0:23:3.01:0,3,46	0/1:32,1:24:62.83:63,0,82	0/0:15,0:14:2.94:0,3,45	0/0:11,0:11:18.06:0,18,277	0/0:18,0:18:33.05:0,33,460	0/1:17,9:27:16.35:235,0,16	0/0:13,0:14:24.04:0,24,343	0/0:7,0:7:9.02:0,9,118	0/0:4,0:4:3.01:0,3,44	0/1:10,1:11:4.13:4,0,340	0/0:14,0:14:30.10:0,30,457	0/1:11,2:13:44.28:44,0,244	0/0:9,0:15:3:0,3,26	0/0:12,0:14:21.06:0,21,303	0/1:18,2:20:26.26:26,0,487	0/0:19,0:19:36.02:0,36,480	1/1:6,8:13:20.89:219,21,0	1/1:5,3:8:6.02:68,6,0	1/1:12,22:34:12.77:571,13,0	1/1:8,0:8:0.47:1,0,0	0/1:7,4:11:54:54,0,207	0/0:28,2:30:1.91:0,2,449	0/1:11,1:12:13.12:13,0,245	0/0:10,0:9:12.03:0,12,141	1/1:6,4:9:9.18:132,9,0	0/0:12,0:12:1.40:0,1,17
chr10	103989804	.	CATACAT	C	830.89	PASS	AB=1.000;AC=18;AF=0.333;AN=54;BaseQRankSum=-0.302;DP=243;FS=16.315;HRun=0;HaplotypeScore=62.5649;InbreedingCoeff=0.7186;MQ=82.11;MQ0=0;MQRankSum=1.252;QD=13.85;ReadPosRankSum=-2.568;VQSLOD=0.0142;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:36.48:0,36,687	0/0:4,0:4:12.04:0,12,427	0/1:13,0:7:7.60:8,0,71	0/0:18,0:14:2.77:0,3,113	1/1:7,2:10:20.97:198,21,0	0/0:9,0:9:24.07:0,24,596	0/0:8,0:8:23.99:0,24,298	0/1:4,0:4:64.21:69,0,64	0/0:7,0:7:18.02:0,18,396	0/0:5,0:5:12.02:0,12,191	0/0:10,0:10:27.01:0,27,372	0/0:5,0:5:15:0,15,186	0/0:6,0:6:18.03:0,18,469	0/0:5,0:5:8.98:0,9,73	1/1:5,2:7:5.99:50,6,0	0/0:7,0:7:18.02:0,18,395	0/0:24,0:24:68.43:0,68,1482	0/0:23,0:22:45.55:0,46,1144	1/1:3,0:3:6:53,6,0	1/1:4,0:4:11.99:100,12,0	./.	1/1:3,0:3:8.99:75,9,0	0/0:11,0:11:20.99:0,21,198	0/0:9,0:9:23.99:0,24,405	0/0:12,0:12:33.05:0,33,648	1/1:7,1:8:18.03:254,18,0	1/1:5,0:5:8.98:72,9,0	1/1:2,1:3:9.01:141,9,0
chr10	103989808	.	CAT	C	244.67	PASS	AB=0.937;AC=15;AF=0.326;AN=46;BaseQRankSum=2.567;DP=225;FS=0.945;HRun=0;HaplotypeScore=45.2637;InbreedingCoeff=-0.0168;MQ=80.53;MQ0=0;MQRankSum=-0.615;QD=1.76;ReadPosRankSum=1.016;VQSLOD=1.4173;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,3:17:81.44:81,0,191	0/0:4,0:4:12.04:0,12,189	0/1:9,0:6:3.09:3,0,26	0/0:16,0:13:4.01:0,4,56	1/1:9,0:9:2.68:11,3,0	0/1:9,1:10:16.04:16,0,185	0/1:7,1:8:29.30:29,0,41	0/0:6,0:6:8.93:0,9,78	0/0:7,0:7:11.07:0,11,148	0/0:6,0:6:6.47:0,6,74	0/1:7,0:7:26.29:26,0,81	0/0:5,0:5:3:0,3,26	0/0:6,0:6:12.04:0,12,189	0/0:3,0:3:0:0,0,0	0/0:7,0:7:0:0,0,0	0/0:6,0:6:9.03:0,9,142	0/1:22,3:26:99:101,0,524	0/1:25,0:24:28.98:29,0,474	./.	./.	./.	./.	1/1:8,0:8:3:25,3,0	0/0:8,0:8:9.03:0,9,139	0/1:10,1:11:14.28:14,0,236	0/1:6,0:6:0.42:9,0,0	./.	1/1:3,0:3:5.75:30,6,0
chr10	103989831	.	ATG	A	61.39	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=5.961;DP=201;FS=2.717;HRun=0;HaplotypeScore=43.4661;InbreedingCoeff=0.2533;MQ=69.47;MQ0=4;MQRankSum=-1.442;QD=0.76;ReadPosRankSum=-1.137;VQSLOD=1.2135;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:15:13.76:14,0,261	0/0:5,0:5:15.04:0,15,246	0/1:5,0:2:2.42:2,0,7	0/0:10,0:6:7.38:0,7,41	1/1:5,0:5:3:25,3,0	0/1:12,0:12:4.43:4,0,306	0/1:2,0:2:4.73:5,0,52	0/1:16,0:15:40.59:41,0,147	0/0:4,0:4:11.99:0,12,192	0/0:7,0:7:12.57:0,13,189	0/0:7,0:7:3.51:0,4,158	0/0:1,0:1:2.90:0,3,16	0/0:7,0:7:21.03:0,21,292	0/0:3,0:3:8.99:0,9,75	0/0:3,0:3:0:0,0,0	0/0:3,0:3:9.03:0,9,172	0/0:24,0:24:13.23:0,13,658	0/0:25,0:23:6.40:0,6,612	1/1:1,0:1:3.01:31,3,0	0/0:4,0:4:8.15:0,8,24	0/0:1,0:1:2.04:0,2,6	1/1:0,2:2:1.77:4,2,0	0/0:4,0:4:8.99:0,9,74	0/0:4,0:4:12.01:0,12,164	0/0:8,0:8:10.26:0,10,266	0/1:6,0:6:3.88:37,0,4	1/1:8,0:8:4.09:27,4,0	1/1:1,7:8:2.36:7,2,0
chr10	103989844	.	T	TCAC	220.55	PASS	AB=0.726;AC=9;AF=0.180;AN=50;BaseQRankSum=5.688;DP=248;FS=35.968;HRun=0;HaplotypeScore=55.5065;InbreedingCoeff=0.4106;MQ=54.43;MQ0=4;MQRankSum=-0.306;QD=3.74;ReadPosRankSum=-1.507;VQSLOD=-0.0528;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:33.11:0,33,613	0/0:5,0:5:15.05:0,15,264	./.	0/0:5,0:2:2.97:0,3,20	0/0:0,0:10:2.50:0,2,9	0/0:12,0:12:27.09:0,27,502	0/0:3,0:3:9.03:0,9,167	0/1:7,0:22:99:185,0,170	0/0:9,0:9:27.09:0,27,489	0/0:11,0:11:30.09:0,30,514	0/0:8,0:8:21.07:0,21,376	0/0:5,0:5:15.05:0,15,255	0/0:7,0:7:21.07:0,21,376	0/0:5,0:5:15.05:0,15,279	1/1:5,0:7:0.78:3,1,0	0/0:3,0:3:9.03:0,9,167	0/0:23,0:23:63.21:0,63,1088	0/0:23,0:22:55.05:0,55,926	1/1:1,0:6:11.50:67,11,0	./.	./.	0/1:5,0:5:3.78:4,0,39	0/0:5,0:5:15.05:0,15,272	0/0:8,0:8:21.07:0,21,388	0/0:8,0:8:24.08:0,24,447	0/1:2,0:8:13.89:14,0,85	1/1:0,1:10:8.98:73,9,0	0/0:11,0:11:8.34:0,8,116
chr10	103993623	.	T	TG	9021.29	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-15.298;DP=689;FS=17.437;HRun=2;HaplotypeScore=65.7513;InbreedingCoeff=0.9925;MQ=91.40;MQ0=0;MQRankSum=-3.038;QD=37.59;ReadPosRankSum=-0.887;VQSLOD=2.9041;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,1213	0/0:14,0:14:36.11:0,36,446	0/0:39,0:39:99:0,114,1321	0/0:21,0:21:51.15:0,51,624	1/1:0,18:18:51.13:709,51,0	0/0:18,0:18:51.13:0,51,605	0/0:29,0:29:81.25:0,81,1004	1/1:4,21:25:63.21:906,63,0	0/0:34,0:34:99:0,102,1250	0/0:29,0:29:84.26:0,84,1033	0/0:12,0:12:33.06:0,33,380	0/0:25,0:25:69.20:0,69,842	0/0:18,0:18:54.15:0,54,656	0/0:34,0:34:99:0,102,1234	1/1:0,31:31:81.27:1166,81,0	0/0:27,0:27:81.24:0,81,991	0/0:26,0:26:78.22:0,78,951	0/0:25,0:25:75.19:0,75,912	1/1:0,16:16:42.13:587,42,0	1/1:1,18:19:54.13:753,54,0	1/1:1,42:43:99:1641,114,0	1/1:0,23:23:66.15:925,66,0	0/0:15,0:15:42.13:0,42,521	0/0:33,0:33:99:0,99,1196	0/0:14,0:14:39.12:0,39,483	1/1:5,25:30:9.86:1012,10,0	1/1:1,23:23:63.21:906,63,0	1/1:1,10:11:30.10:418,30,0
chr10	103994521	.	GTACACA	G	1219.59	PASS	AB=0.565;AC=14;AF=0.259;AN=54;BaseQRankSum=9.660;DP=674;FS=5.140;HRun=0;HaplotypeScore=150.8159;InbreedingCoeff=0.7539;MQ=63.36;MQ0=7;MQRankSum=-1.648;QD=8.53;ReadPosRankSum=-0.564;VQSLOD=2.4578;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:87.21:0,87,2564	0/0:16,0:16:42.14:0,42,1254	0/0:33,0:5:2.41:0,2,73	0/0:50,0:14:11.54:0,12,248	0/1:4,14:18:0:0,0,1	0/0:29,0:29:75.23:0,75,2070	0/0:27,0:27:63.14:0,63,1506	1/1:16,0:16:15.54:104,16,0	0/0:36,0:36:81.23:0,81,2205	0/0:23,0:23:63.19:0,63,1680	0/0:22,0:23:54.17:0,54,1515	0/0:26,0:26:69.21:0,69,2091	0/0:32,0:31:84.27:0,84,2489	0/0:23,0:23:66.19:0,66,1884	0/0:3,20:23:0.47:0,0,1	0/0:24,0:24:60.19:0,60,1812	0/0:20,0:20:45.14:0,45,1236	0/0:27,0:27:52.20:0,52,1957	1/1:17,0:17:15.92:107,16,0	1/1:13,0:13:2.58:13,3,0	1/1:34,0:34:12.56:97,13,0	./.	0/0:30,0:29:78.24:0,78,2288	0/0:23,0:23:54.19:0,54,1746	0/0:15,0:15:33.10:0,33,698	0/1:5,16:21:42.78:751,0,43	1/1:16,0:15:15.45:159,15,0	1/1:8,0:8:11.94:157,12,0
chr10	103994543	.	ACGCACACACACT	A	794.29	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=9.059;DP=710;FS=1.213;HRun=0;HaplotypeScore=223.2027;InbreedingCoeff=0.6058;MQ=52.37;MQ0=19;MQRankSum=-4.421;QD=4.36;ReadPosRankSum=-4.539;VQSLOD=1.7030;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:99:0,114,3576	0/0:18,0:17:48.16:0,48,1831	0/0:30,0:3:6.88:0,7,66	0/0:43,0:7:2.06:0,2,120	1/1:25,0:25:2.05:26,2,0	0/0:26,0:26:75.14:0,75,2596	0/0:26,0:26:69.10:0,69,1911	1/1:7,0:6:16.17:133,16,0	0/0:36,0:35:90.12:0,90,3291	0/0:32,0:32:92.76:0,93,3026	0/0:22,0:22:52.39:0,52,1715	0/0:26,0:25:74.53:0,75,2558	0/0:31,0:30:81.16:0,81,2450	0/0:23,0:23:57.02:0,57,1935	0/0:26,0:26:6.39:0,6,104	0/0:22,0:22:66.20:0,66,1710	0/1:21,0:21:6.18:6,0,1435	0/0:30,0:30:84.25:0,84,3518	1/1:13,0:9:16.23:222,16,0	1/1:16,3:19:8.80:51,9,0	1/1:35,0:32:9.56:85,10,0	0/1:22,0:21:14.69:15,0,86	0/0:31,0:30:90.18:0,90,3388	0/0:29,0:29:55.07:0,55,3104	0/0:21,0:21:44.17:0,44,1806	0/1:29,0:29:99:192,0,288	1/1:9,2:10:12.47:240,12,0	0/0:10,0:10:9.56:0,10,142
chr10	103994553	.	ACT	A	932.42	PASS	AB=0.942;AC=18;AF=0.321;AN=56;BaseQRankSum=9.693;DP=695;FS=17.694;HRun=0;HaplotypeScore=111.6352;InbreedingCoeff=0.3380;MQ=51.37;MQ0=18;MQRankSum=-3.209;QD=3.23;ReadPosRankSum=-2.598;VQSLOD=0.9410;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:91.91:0,92,1400	0/0:20,0:19:53.64:0,54,638	0/0:17,0:2:5.82:0,6,33	0/1:39,0:5:1.69:2,0,40	1/1:22,0:22:5.26:50,5,0	0/0:26,0:26:38.44:0,38,855	0/1:22,1:23:3.34:3,0,600	0/1:7,7:12:77.13:116,0,77	0/0:32,0:31:32.33:0,32,991	0/0:29,0:29:82.94:0,83,1042	0/0:20,0:20:29.46:0,29,483	0/0:30,0:29:58.80:0,59,909	0/0:34,0:33:18.60:0,19,831	0/0:18,0:18:42.58:0,43,626	1/1:24,0:24:11.92:82,12,0	0/0:23,0:23:50.84:0,51,768	0/1:21,0:21:32.26:32,0,406	0/0:32,0:32:61.34:0,61,1153	0/1:11,0:7:0.45:95,0,0	1/1:7,14:21:1.31:57,1,0	1/1:10,34:41:8.95:85,9,0	0/1:22,0:21:18.66:57,0,19	0/0:29,0:28:52.31:0,52,1045	0/0:29,0:29:48.12:0,48,1090	0/0:19,1:20:46.90:0,47,692	0/1:26,0:26:31.60:286,0,32	1/1:2,10:12:15.04:186,15,0	0/1:9,0:9:39:53,0,39
chr10	103994555	.	TCA	T	203.29	PASS	AB=0.926;AC=15;AF=0.278;AN=54;BaseQRankSum=4.990;DP=703;FS=0.675;HRun=0;HaplotypeScore=115.3092;InbreedingCoeff=-0.1682;MQ=51.33;MQ0=18;MQRankSum=1.093;QD=0.61;ReadPosRankSum=0.423;VQSLOD=2.2294;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:79.73:0,80,1051	0/0:21,0:20:9.47:0,9,381	0/0:16,0:3:2.99:0,3,23	./.	0/0:22,0:22:1.90:0,2,23	0/1:23,3:26:17.37:17,0,570	0/1:20,3:23:48.28:48,0,385	0/0:14,0:12:12.96:0,13,75	0/1:25,5:30:27.50:28,0,609	0/0:31,0:31:23.38:0,23,563	0/1:17,4:21:38.30:38,0,229	0/1:25,2:26:16.37:16,0,622	0/1:29,4:32:46.14:46,0,518	0/1:19,1:20:3.69:4,0,360	0/0:22,0:22:4.71:0,5,28	0/1:22,0:22:16.38:16,0,420	0/1:18,1:21:8.75:9,0,276	0/0:31,2:34:1.45:0,1,759	0/0:12,0:8:4.73:0,5,40	1/1:21,0:22:3.01:20,3,0	1/1:47,0:44:1.58:17,2,0	0/0:24,0:23:8.26:0,8,52	0/0:27,0:26:22.36:0,22,669	0/0:30,0:30:14.42:0,14,717	0/0:18,3:21:42.10:0,42,584	0/1:27,0:27:11.91:12,0,73	0/1:13,0:12:6.42:74,0,6	0/0:10,0:9:5.94:0,6,43
chr10	103995071	.	AAAAG	A	250.04	PASS	AB=0.949;AC=6;AF=0.120;AN=50;BaseQRankSum=4.483;DP=490;FS=3.884;HRun=0;HaplotypeScore=80.4135;InbreedingCoeff=0.1800;MQ=64.68;MQ0=3;MQRankSum=1.740;QD=2.69;ReadPosRankSum=-0.474;VQSLOD=1.3439;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:15.05:0,15,277	0/0:4,0:4:9.03:0,9,191	./.	./.	0/0:23,0:23:45.15:0,45,1018	0/1:13,1:14:21.47:21,0,463	0/0:18,0:18:15.05:0,15,326	./.	0/0:20,0:20:36.12:0,36,791	1/1:7,9:15:26.99:322,27,0	0/0:18,1:19:0.84:0,1,886	0/0:5,0:12:18.06:0,18,317	0/0:14,0:14:15.05:0,15,347	0/0:10,0:10:6.02:0,6,139	0/0:14,0:14:15.05:0,15,318	0/0:6,0:12:18.04:0,18,289	0/0:22,0:22:27.09:0,27,602	0/1:21,1:22:6.42:6,0,792	0/0:14,0:14:15.05:0,15,248	0/0:22,0:33:33.10:0,33,515	0/0:8,0:11:6.02:0,6,100	0/0:13,0:13:12.04:0,12,278	0/0:18,0:17:27.09:0,27,597	0/0:14,0:14:21.04:0,21,422	0/1:21,1:22:9.44:9,0,689	0/0:20,0:20:36.12:0,36,789	0/0:19,0:25:18.01:0,18,281	0/1:18,1:19:9.44:9,0,685
chr10	103995591	.	TG	T	2185.01	PASS	AC=42;AF=0.955;AN=44;BaseQRankSum=-0.200;DP=133;FS=0.000;HRun=4;HaplotypeScore=39.0914;InbreedingCoeff=0.1820;MQ=44.79;MQ0=3;MQRankSum=-0.054;QD=19.34;ReadPosRankSum=-0.708;VQSLOD=2.3866;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:4:12.03:137,12,0	1/1:0,2:1:2.99:24,3,0	./.	0/0:7,1:4:3.12:0,3,79	1/1:0,8:6:9.02:101,9,0	1/1:0,2:2:6.02:69,6,0	./.	1/1:4,12:12:27.08:324,27,0	1/1:1,3:1:3.01:34,3,0	1/1:1,6:6:15.05:180,15,0	1/1:0,7:4:9.02:94,9,0	1/1:0,3:2:6.02:69,6,0	1/1:0,3:2:6.02:72,6,0	1/1:0,5:4:12.04:144,12,0	1/1:0,3:3:9.03:108,9,0	1/1:0,4:2:3.01:36,3,0	1/1:0,5:5:12.02:138,12,0	./.	./.	1/1:2,5:4:3.01:33,3,0	./.	1/1:0,4:2:6.02:72,6,0	1/1:0,4:2:6.02:69,6,0	./.	1/1:0,10:10:21.06:252,21,0	1/1:1,7:5:9.03:106,9,0	1/1:0,5:5:11.86:144,12,0	1/1:0,2:2:6.02:72,6,0
chr10	103995813	.	AGTGT	A	261.45	PASS	AB=0.909;AC=11;AF=0.239;AN=46;BaseQRankSum=3.995;DP=452;FS=4.444;HRun=0;HaplotypeScore=77.8946;InbreedingCoeff=0.4747;MQ=56.74;MQ0=21;MQRankSum=-0.062;QD=2.75;ReadPosRankSum=-1.212;VQSLOD=1.3938;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:5.85:0,6,112	0/0:2,0:2:0.47:0,0,1	./.	./.	1/1:10,0:11:2.22:7,2,0	0/0:19,0:18:6.02:0,6,140	0/0:28,0:28:17.87:0,18,320	0/0:29,0:28:0.47:0,0,1	0/0:14,0:13:3.01:0,3,70	0/0:19,0:17:4.26:0,4,47	0/0:10,0:10:3.01:0,3,65	0/0:8,0:7:10.26:0,10,113	0/0:10,0:9:15.03:0,15,263	0/0:7,0:7:9.01:0,9,147	./.	0/0:6,0:6:6.02:0,6,140	0/0:38,0:39:41.83:0,42,724	0/0:27,0:26:21.07:0,21,483	1/1:17,5:21:9:97,9,0	1/1:6,4:10:9.03:125,9,0	1/1:17,2:16:6.02:92,6,0	./.	0/0:11,0:11:6.02:0,6,85	0/0:31,0:32:32.54:0,33,526	0/0:11,0:10:3.01:0,3,70	0/1:18,0:19:43.79:44,0,87	./.	1/1:11,0:13:3:28,3,0
chr10	103996122	.	CAAAAAG	C	1051.33	PASS	AB=0.961;AC=10;AF=0.179;AN=56;BaseQRankSum=9.460;DP=487;FS=23.188;HRun=0;HaplotypeScore=112.9018;InbreedingCoeff=-0.0493;MQ=79.29;MQ0=5;MQRankSum=-7.596;QD=6.33;ReadPosRankSum=3.696;VQSLOD=0.5963;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:50.87:0,51,913	0/0:3,0:3:6.02:0,6,71	0/0:40,0:22:41.18:0,41,356	0/0:34,0:18:34.90:0,35,304	0/1:19,0:19:14.39:193,0,14	0/0:17,0:17:49.03:0,49,930	0/0:11,0:11:27.08:0,27,637	0/1:29,0:29:20.86:21,0,158	0/0:12,0:12:32.78:0,33,482	0/0:12,0:12:23.99:0,24,492	0/0:16,0:16:36.96:0,37,775	0/0:11,0:11:20.90:0,21,203	0/0:12,0:11:30.04:0,30,665	0/0:16,0:16:44.22:0,44,567	1/1:17,0:17:2.15:284,2,0	0/0:12,0:12:27.03:0,27,417	0/0:17,0:17:44.55:0,45,714	0/0:21,0:21:56.50:0,56,942	0/1:22,0:22:9.45:9,0,223	0/1:13,0:13:40.59:41,0,51	0/0:14,0:13:16.87:0,17,127	0/1:16,1:17:56.09:215,0,56	0/0:15,0:15:28.12:0,28,296	0/0:18,0:18:24.43:0,24,299	0/0:18,0:18:41.39:0,41,728	0/1:12,1:13:42.38:215,0,42	0/1:27,0:27:43.21:59,0,43	0/1:7,2:9:68.89:155,0,69
chr10	103997676	.	CCA	C	417.31	PASS	AB=0.956;AC=22;AF=0.458;AN=48;BaseQRankSum=3.190;DP=538;FS=14.169;HRun=0;HaplotypeScore=92.7557;InbreedingCoeff=-0.3593;MQ=55.87;MQ0=29;MQRankSum=0.109;QD=1.27;ReadPosRankSum=1.229;VQSLOD=1.0020;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:28:11.99:12,0,195	0/1:6,0:6:19.69:20,0,95	./.	./.	0/1:13,0:12:14.45:14,0,34	0/0:17,0:17:24.02:0,24,268	0/1:26,0:26:8.53:9,0,260	./.	0/1:14,3:17:14.35:14,0,182	0/1:16,0:15:16.20:16,0,143	0/1:6,0:6:25.58:26,0,44	0/1:14,1:15:11.38:11,0,193	0/0:16,0:16:15.61:0,16,138	0/0:22,0:20:18.06:0,18,264	0/1:15,0:15:26.54:27,0,124	0/1:14,1:15:14.38:14,0,180	0/1:25,2:31:99:121,0,270	0/1:14,1:14:37.24:37,0,145	0/0:13,0:11:2.78:0,3,19	1/1:8,0:16:13.73:64,14,0	0/0:31,0:28:7.88:0,8,38	1/1:16,0:16:8.93:67,9,0	0/1:14,0:13:5.79:6,0,121	0/1:27,8:34:31.94:32,0,354	0/1:13,0:10:6.90:7,0,54	0/1:11,1:13:41.17:41,0,67	1/1:9,0:13:5.68:28,6,0	./.
chr10	104000002	.	T	TA	2574.81	PASS	AC=18;AF=0.333;AN=54;BaseQRankSum=10.415;DP=258;FS=4.241;HRun=0;HaplotypeScore=35.9927;InbreedingCoeff=0.9171;MQ=69.36;MQ0=2;MQRankSum=-2.794;QD=25.49;ReadPosRankSum=0.643;VQSLOD=4.2083;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.12:0,60,777	0/0:3,0:3:9.02:0,9,110	0/0:5,0:4:11.20:0,11,67	0/0:4,0:4:8.91:0,9,65	1/1:0,9:9:24.07:289,24,0	0/0:14,0:14:42.12:0,42,553	0/0:5,0:5:12.03:0,12,150	1/1:6,28:32:74.22:900,74,0	0/0:6,0:5:12.04:0,12,167	0/0:6,0:6:18.05:0,18,226	0/0:4,0:4:12.03:0,12,151	0/0:11,0:11:33.08:0,33,414	0/0:6,0:6:18.05:0,18,236	0/0:3,0:3:9.03:0,9,126	1/1:0,7:7:12.04:142,12,0	0/0:3,0:3:9.02:0,9,105	0/0:23,0:23:69.19:0,69,912	0/0:19,0:19:50.81:0,51,661	1/1:1,12:13:35.07:410,35,0	./.	1/1:0,5:5:12.04:143,12,0	1/1:1,4:5:9.03:106,9,0	0/0:7,0:7:18.04:0,18,221	0/0:6,0:6:18.05:0,18,236	0/0:12,0:12:33.07:0,33,397	1/1:0,7:7:21.01:226,21,0	1/1:1,8:9:20.81:241,21,0	1/1:0,12:12:27.08:322,27,0
chr10	104000381	.	GACAC	G	1218.92	PASS	AB=0.904;AC=12;AF=0.214;AN=56;BaseQRankSum=2.423;DP=692;FS=2.275;HRun=0;HaplotypeScore=130.1570;InbreedingCoeff=0.5297;MQ=61.82;MQ0=19;MQRankSum=0.030;QD=6.48;ReadPosRankSum=1.445;VQSLOD=2.7338;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:38:44.61:0,45,1000	0/0:8,0:10:14.74:0,15,201	0/0:46,0:16:5.99:0,6,48	0/0:51,0:28:1.36:0,1,3	0/0:20,0:21:30.05:0,30,366	0/0:17,0:17:29.77:0,30,566	0/0:34,0:36:50.89:0,51,1004	0/1:26,3:28:3.91:50,0,4	0/0:19,0:24:50.61:0,51,879	0/0:28,1:29:7.22:0,7,798	0/0:15,0:15:18.06:0,18,390	0/1:22,1:24:12.01:12,0,573	0/1:14,1:17:15.32:15,0,505	0/0:18,0:19:29.82:0,30,557	0/0:15,0:16:15.51:0,16,210	0/0:11,0:13:23.82:0,24,477	0/0:20,1:22:2.67:0,3,822	0/0:14,0:16:35.59:0,36,707	1/1:10,1:10:9.02:123,9,0	1/1:4,9:14:14.81:213,15,0	1/1:30,27:57:33.44:625,33,0	0/0:21,0:28:30.07:0,30,414	0/1:16,1:18:11.94:12,0,657	0/0:32,0:39:53.43:0,53,813	0/0:16,0:19:32.79:0,33,546	0/0:11,0:19:29.70:0,30,322	1/1:3,11:14:20.97:335,21,0	0/0:7,0:20:27.01:0,27,443
chr10	104000525	.	GGAGA	G	88.37	PASS	AB=0.964;AC=9;AF=0.180;AN=50;BaseQRankSum=0.567;DP=497;FS=0.000;HRun=0;HaplotypeScore=109.4402;InbreedingCoeff=0.0568;MQ=50.15;MQ0=18;MQRankSum=2.022;QD=0.60;ReadPosRankSum=0.917;VQSLOD=2.0196;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:2.22:0,2,7	./.	0/0:29,0:15:0.47:0,0,1	./.	0/0:5,0:5:0.47:0,0,1	0/0:16,0:16:12.40:0,12,164	0/1:22,1:22:34.01:34,0,195	0/0:43,0:40:32.38:0,32,263	0/1:11,1:12:28:28,0,224	0/0:16,0:16:11.25:0,11,336	./.	0/0:17,0:17:6.02:0,6,128	0/0:14,0:16:11.77:0,12,157	0/1:10,1:11:54.84:71,0,55	0/0:14,0:12:4.62:0,5,54	0/0:16,0:14:11.71:0,12,161	0/1:26,0:25:3.01:3,0,367	0/1:15,0:14:0:0,0,0	0/0:15,0:15:10.71:0,11,81	0/0:20,0:18:4.60:0,5,26	0/0:28,0:25:8.60:0,9,82	0/0:12,0:12:3.01:0,3,49	0/0:11,0:11:6.02:0,6,137	0/1:35,0:37:17.01:17,0,545	1/1:13,1:14:3.01:46,3,0	0/0:17,0:17:11.91:0,12,130	0/1:8,0:7:0.46:0,0,19	0/0:9,0:8:8.95:0,9,67
chr10	104000540	.	G	GAGAGAGAAACACACACAGAGA	11635.44	PASS	AB=0.956;AC=13;AF=0.232;AN=56;BaseQRankSum=6.736;DP=517;FS=4.045;HRun=0;HaplotypeScore=269.5689;InbreedingCoeff=0.0626;MQ=47.06;MQ0=19;MQRankSum=-11.683;QD=55.41;ReadPosRankSum=0.881;VQSLOD=4.1482;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:17.43:0,17,635	0/0:5,0:3:3.01:0,3,134	0/0:16,0:4:6.02:0,6,92	0/1:18,0:9:7.67:8,0,162	0/1:6,0:6:26.42:238,0,26	0/0:20,0:20:38.96:0,39,1530	0/0:23,0:22:51.12:0,51,1755	0/1:52,0:49:99:3320,0,308	0/0:15,0:15:36.09:0,36,1607	0/0:20,0:20:57.18:0,57,2144	0/0:14,0:13:5.07:0,5,428	0/0:17,0:17:23.86:0,24,673	0/0:22,0:22:54.18:0,54,1890	0/0:14,0:14:30.09:0,30,1192	1/1:17,0:16:26.12:1185,26,0	0/0:16,0:13:36.10:0,36,1356	0/0:30,0:28:25.94:0,26,2690	0/0:13,0:13:18.44:0,18,961	1/1:12,0:11:20.51:872,21,0	0/1:20,0:19:97.72:1115,0,98	0/1:25,0:22:99:280,0,287	0/1:9,5:14:40.38:500,0,40	0/0:11,0:11:21.07:0,21,895	0/0:38,0:38:99:0,100,4236	0/0:13,0:12:24.08:0,24,829	0/1:18,0:18:99:1491,0,119	0/1:14,0:13:35.79:1641,0,36	0/1:9,0:8:99:986,0,100
chr10	104003703	.	AGTGTGTGTGTGTGT	A	1396.58	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.051;DP=571;FS=2.018;HRun=0;HaplotypeScore=205.5012;InbreedingCoeff=0.8242;MQ=69.86;MQ0=21;MQRankSum=-4.296;QD=18.38;ReadPosRankSum=0.535;VQSLOD=2.8055;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:48.13:0,48,2229	0/0:9,0:8:15.05:0,15,877	0/0:24,0:16:12.04:0,12,405	0/0:40,0:29:33.05:0,33,947	1/1:8,6:15:2.01:100,2,0	0/0:18,0:17:24.08:0,24,1367	0/0:28,0:26:48.16:0,48,2537	0/0:21,0:20:45.15:0,45,1707	0/0:21,0:21:42.14:0,42,1752	0/0:25,0:24:48.16:0,48,2782	0/0:20,0:19:42.14:0,42,2606	0/0:20,0:19:27.08:0,27,1355	0/0:10,0:10:24.08:0,24,1507	0/0:17,0:16:30.09:0,30,1546	1/1:6,10:18:3.01:104,3,0	0/0:19,0:19:39.59:0,40,2262	0/0:30,0:29:60.15:0,60,3152	0/0:18,0:18:42.12:0,42,2145	0/0:20,0:17:33.10:0,33,1527	0/0:5,0:14:9.03:0,9,352	0/0:42,0:40:63.95:0,64,3470	1/1:8,0:10:6:74,6,0	0/0:21,0:21:45.15:0,45,2460	0/0:28,0:28:66.21:0,66,3802	0/0:13,0:13:24.07:0,24,1328	1/1:8,3:19:33.11:1133,33,0	0/0:12,0:12:27.05:0,27,1270	1/1:11,0:8:6:130,6,0
chr10	104003752	.	C	CTGTGTG	60.01	PASS	AB=1.000;AC=11;AF=0.220;AN=50;BaseQRankSum=3.727;DP=681;FS=1.243;HRun=0;HaplotypeScore=150.8839;InbreedingCoeff=0.2619;MQ=41.67;MQ0=144;MQRankSum=-3.622;QD=0.39;ReadPosRankSum=-0.892;VQSLOD=2.7718;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:27:9.01:0,9,95	0/0:9,0:9:2.15:0,2,95	./.	./.	0/0:26,0:18:10.44:0,10,123	1/1:31,0:25:6.75:67,7,0	0/0:44,0:29:2.57:0,3,11	./.	0/0:18,0:15:7.58:0,8,122	0/0:39,0:26:12.19:0,12,350	0/0:15,0:14:3.01:0,3,59	0/0:23,0:21:18.06:0,18,310	1/1:17,0:14:0.47:1,0,0	0/0:20,0:18:15.05:0,15,279	0/0:26,0:19:20.10:0,20,343	0/1:24,0:20:1.90:2,0,448	0/0:30,0:24:21.01:0,21,301	0/0:28,0:22:5.05:0,5,94	1/1:21,0:16:3.17:7,3,0	0/1:18,0:13:13.38:13,0,69	0/0:59,0:37:7.52:0,8,183	0/0:21,0:14:3.48:0,3,54	0/0:15,0:11:6.02:0,6,88	0/0:43,0:33:18.05:0,18,348	1/1:18,6:21:3.01:49,3,0	0/0:29,0:21:17.15:0,17,304	0/1:19,0:18:37.97:38,0,86	0/0:12,0:6:1.27:0,1,95
chr10	104003955	.	GGA	G	1629.42	PASS	AB=0.938;AC=13;AF=0.232;AN=56;BaseQRankSum=7.378;DP=431;FS=1.169;HRun=0;HaplotypeScore=61.3757;InbreedingCoeff=0.7283;MQ=77.42;MQ0=2;MQRankSum=0.085;QD=14.95;ReadPosRankSum=2.869;VQSLOD=3.0436;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:33:46.42:0,46,1301	0/0:6,0:6:18.06:0,18,299	0/1:21,1:14:17.33:17,0,200	0/0:32,0:23:23.27:0,23,447	1/1:2,6:8:15.05:189,15,0	0/0:14,0:14:36.11:0,36,572	0/0:23,0:23:54.18:0,54,884	0/0:18,0:18:45.15:0,45,736	0/1:12,1:13:1.70:2,0,512	0/0:13,0:13:36.12:0,36,599	0/0:13,0:13:33.11:0,33,538	0/0:15,0:16:28.24:0,28,622	0/0:12,0:12:30.10:0,30,498	0/0:13,0:12:30.10:0,30,498	1/1:3,14:17:42.13:530,42,0	0/0:19,0:19:42.14:0,42,691	0/1:12,1:13:7.77:8,0,419	0/0:13,0:13:33.11:0,33,548	0/0:10,0:10:24.08:0,24,399	0/0:13,0:13:39.13:0,39,648	0/0:22,0:22:57.18:0,57,923	1/1:2,9:10:24.08:303,24,0	0/0:14,0:14:33.10:0,33,515	0/0:12,0:12:30.10:0,30,498	0/0:13,0:13:39.12:0,39,619	1/1:2,17:19:51.16:644,51,0	0/0:13,0:13:39.13:0,39,647	1/1:4,2:5:9.03:112,9,0
chr10	104004700	.	TGG	T	2318.02	PASS	AB=0.846;AC=13;AF=0.232;AN=56;BaseQRankSum=-2.355;DP=411;FS=0.000;HRun=10;HaplotypeScore=68.0067;InbreedingCoeff=0.7106;MQ=85.52;MQ0=1;MQRankSum=-3.416;QD=17.83;ReadPosRankSum=4.184;VQSLOD=2.0450;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:21:47.10:0,47,625	0/0:7,0:8:12.06:0,12,191	0/0:29,0:24:36.98:0,37,432	0/0:15,0:14:17.59:0,18,173	0/1:17,0:17:2.33:2,0,345	0/0:16,0:16:36.05:0,36,489	0/0:18,0:20:43.94:0,44,559	1/1:0,13:13:39.04:408,39,0	0/0:13,0:13:34.38:0,34,390	0/0:9,0:9:21.03:0,21,268	0/0:9,0:11:23.52:0,24,275	0/0:6,0:7:12.01:0,12,135	0/0:11,0:11:20.98:0,21,282	0/0:9,0:10:20.56:0,21,286	0/0:6,0:6:15.02:0,15,210	0/1:2,1:14:33.97:34,0,58	0/0:28,0:31:70.13:0,70,852	0/0:21,0:23:52.93:0,53,644	1/1:3,21:25:62.86:671,63,0	1/1:1,12:13:27.06:301,27,0	1/1:1,12:13:30.08:334,30,0	0/1:8,0:8:15.62:16,0,172	0/0:11,0:11:20.10:0,20,289	0/0:17,0:18:35.52:0,36,496	0/0:6,0:6:15.04:0,15,216	0/0:8,0:8:20.47:0,20,259	1/1:4,23:27:66.17:733,66,0	0/0:7,0:7:17.86:0,18,206
chr10	104004859	.	GAAA	G	1309.55	PASS	AB=0.639;AC=12;AF=0.214;AN=56;BaseQRankSum=4.236;DP=477;FS=0.000;HRun=17;HaplotypeScore=79.5981;InbreedingCoeff=0.7306;MQ=78.53;MQ0=4;MQRankSum=-0.837;QD=9.29;ReadPosRankSum=2.392;VQSLOD=-0.3889;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:18:39.08:0,39,510	0/0:7,0:10:27.04:0,27,361	0/0:41,0:29:13.15:0,13,205	0/0:21,0:11:9.56:0,10,69	0/0:9,0:18:8.86:0,9,38	0/0:10,1:18:12.09:0,12,456	0/0:12,0:15:27.07:0,27,394	1/1:14,8:23:29.92:293,30,0	0/0:16,0:18:39.06:0,39,518	0/0:18,0:19:39.05:0,39,498	0/0:9,0:10:27.07:0,27,396	0/0:14,0:14:36.04:0,36,454	0/0:8,0:9:24.02:0,24,309	0/0:13,0:14:27.13:0,27,337	0/0:8,0:14:7.78:0,8,17	0/0:12,0:11:30.10:0,30,469	0/0:19,1:23:29.22:0,29,684	0/0:14,0:15:36.06:0,36,498	1/1:8,13:22:40.56:391,41,0	1/1:8,6:18:19.04:171,19,0	1/1:7,7:15:19.49:200,19,0	0/1:6,1:12:33.82:34,0,38	0/0:13,0:15:37.31:0,37,462	0/0:16,0:16:42.13:0,42,649	0/0:9,0:10:22.32:0,22,345	0/1:8,0:22:11.28:11,0,47	1/1:12,16:29:17.60:388,18,0	0/0:2,0:4:6.73:0,7,31
chr10	104006103	.	T	TGAGATGACATAA	22180.91	PASS	AB=0.671;AC=52;AF=0.963;AN=54;BaseQRankSum=-0.777;DP=274;FS=59.924;HRun=0;HaplotypeScore=284.4949;InbreedingCoeff=-0.0689;MQ=48.97;MQ0=0;MQRankSum=-3.419;QD=81.55;ReadPosRankSum=2.667;VQSLOD=2.6772;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:9.03:416,9,0	1/1:8,0:8:12.04:707,12,0	0/1:4,1:7:29.96:618,0,30	0/1:4,0:7:76.90:403,0,77	1/1:14,0:14:18.53:808,19,0	1/1:10,0:10:21.06:937,21,0	1/1:7,0:7:7.36:200,7,0	1/1:11,0:11:33.11:1591,33,0	1/1:12,0:12:21.07:1017,21,0	1/1:18,0:18:48.10:2061,48,0	1/1:11,0:11:21.07:1038,21,0	1/1:11,0:11:24.08:1334,24,0	1/1:12,0:12:23.95:776,24,0	1/1:9,0:9:9.03:363,9,0	1/1:11,0:11:30.03:1480,30,0	1/1:10,0:10:24.08:1327,24,0	1/1:8,0:8:17.63:469,18,0	./.	1/1:4,0:4:3.01:108,3,0	1/1:11,0:11:24.08:1306,24,0	1/1:6,0:6:6:207,6,0	1/1:11,0:11:21.06:1068,21,0	1/1:14,0:14:18.05:734,18,0	1/1:9,0:9:12.04:438,12,0	1/1:13,0:13:18.06:681,18,0	1/1:14,0:14:24.07:768,24,0	1/1:10,0:10:23.67:1152,24,0	1/1:1,0:1:3.01:174,3,0
chr10	104007413	.	AT	A	765.27	PASS	AB=0.949;AC=26;AF=0.500;AN=52;BaseQRankSum=-0.728;DP=216;FS=0.000;HRun=1;HaplotypeScore=135.4897;InbreedingCoeff=-0.4815;MQ=28.52;MQ0=5;MQRankSum=0.341;QD=4.03;ReadPosRankSum=2.560;VQSLOD=0.3252;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:43.10:80,0,43	0/1:5,1:6:10.25:34,0,10	./.	./.	1/1:2,2:4:1.03:28,1,0	0/1:10,1:11:48.04:48,0,61	0/0:7,0:6:2.51:0,3,30	0/0:9,0:9:19.35:0,19,93	0/1:7,0:7:22.81:23,0,32	0/1:2,1:3:16.89:54,0,17	0/1:5,0:5:6.91:7,0,41	0/1:7,0:8:23.98:24,0,40	0/1:8,0:8:40.95:41,0,47	0/1:10,0:10:56.55:57,0,67	0/1:10,0:10:35.69:42,0,36	0/1:2,0:2:2.47:2,0,24	0/1:6,2:6:7.81:47,0,8	0/0:5,0:3:2.56:0,3,42	0/1:9,1:10:16.81:17,0,80	0/1:9,0:8:16.53:17,0,95	1/1:9,0:9:9:89,9,0	0/1:12,1:13:78.46:78,0,159	1/1:11,0:11:12.59:97,13,0	0/1:4,0:3:0:0,0,0	0/1:12,1:13:31.45:92,0,31	0/1:8,0:7:6.64:7,0,49	0/1:9,0:9:19.60:20,0,57	0/1:3,0:3:1.65:2,0,28
chr10	104007419	.	A	AAT	1790.37	PASS	AB=0.883;AC=22;AF=0.423;AN=52;BaseQRankSum=0.408;DP=315;FS=0.000;HRun=0;HaplotypeScore=188.4640;InbreedingCoeff=-0.7194;MQ=29.34;MQ0=11;MQRankSum=-1.826;QD=6.89;ReadPosRankSum=2.357;VQSLOD=2.9730;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:21.75:22,0,610	0/1:7,1:8:17.29:17,0,93	./.	./.	0/1:5,1:5:28.64:29,0,55	0/1:13,3:16:99:197,0,210	0/1:10,0:9:42.36:42,0,166	0/1:10,3:13:99:132,0,364	0/1:10,2:12:99:124,0,145	0/0:8,0:7:16.14:0,16,140	0/1:8,1:9:39.96:40,0,89	0/1:14,0:13:59.06:59,0,167	0/1:4,4:8:75.67:150,0,76	0/1:10,3:13:99:179,0,142	0/1:7,4:11:37.09:268,0,37	0/1:3,1:4:30.15:50,0,30	0/0:10,1:9:14.53:0,15,180	0/1:7,0:5:29.87:30,0,75	0/1:12,2:12:99:130,0,227	0/1:12,2:12:99:142,0,123	0/1:12,0:12:0.86:1,0,235	0/1:22,0:22:33.49:33,0,338	0/0:14,0:14:19.23:0,19,190	0/0:11,1:9:0.69:0,1,3	0/1:14,2:15:12.42:12,0,270	0/1:8,3:10:99:154,0,147	0/1:8,2:10:58.24:104,0,58	0/1:7,0:7:20.28:20,0,45
chr10	104007439	.	G	GGGGA	2375.11	PASS	AB=0.980;AC=23;AF=0.411;AN=56;BaseQRankSum=7.313;DP=405;FS=27.925;HRun=0;HaplotypeScore=214.8070;InbreedingCoeff=-0.4156;MQ=42.82;MQ0=14;MQRankSum=-3.221;QD=7.59;ReadPosRankSum=3.348;VQSLOD=0.8871;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,1:29:99:137,0,824	0/1:10,0:10:99:139,0,148	0/1:19,0:4:14.63:15,0,37	0/0:15,0:3:0.73:0,1,2	0/1:12,0:11:76.62:77,0,181	0/1:18,0:18:99:100,0,288	0/0:17,0:16:26.57:0,27,465	0/1:27,0:27:99:191,0,697	0/1:12,0:13:13.50:14,0,337	0/1:9,0:8:0.52:1,0,119	0/1:10,0:10:36.47:36,0,199	0/1:12,1:12:99:187,0,211	0/1:12,0:12:44.23:44,0,306	0/1:12,0:13:48.47:48,0,191	1/1:8,2:10:8.07:377,8,0	0/0:5,0:5:10.32:0,10,170	0/0:13,0:12:24.03:0,24,407	0/1:6,0:4:11.82:12,0,89	0/1:15,1:13:99:288,0,206	0/1:17,0:15:99:121,0,203	0/0:15,0:15:36.02:0,36,571	0/1:25,1:26:99:260,0,404	1/1:16,0:16:12.87:147,13,0	0/0:14,0:11:4.36:0,4,63	0/1:16,2:17:99:182,0,238	0/1:11,1:11:99:109,0,246	0/0:11,1:12:26.83:0,27,311	0/1:7,0:7:51.41:51,0,132
chr10	104007451	.	GTGA	G	1298.48	PASS	AB=0.946;AC=25;AF=0.446;AN=56;BaseQRankSum=11.278;DP=376;FS=85.828;HRun=0;HaplotypeScore=172.9525;InbreedingCoeff=-0.1203;MQ=46.07;MQ0=10;MQRankSum=-6.628;QD=4.94;ReadPosRankSum=3.299;VQSLOD=-0.5636;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:1.37:1,0,741	0/1:9,1:11:54.94:55,0,142	0/0:18,0:4:1.95:0,2,67	0/0:16,0:3:5.93:0,6,71	0/1:9,2:11:17.71:18,0,43	0/1:17,0:17:99:127,0,335	0/0:16,0:17:29.13:0,29,384	0/1:18,0:21:94.54:95,0,323	0/1:11,0:11:48.79:49,0,185	0/1:7,1:7:42.84:43,0,142	0/1:9,0:10:25.81:26,0,75	0/1:7,0:7:1.44:1,0,185	0/0:11,0:11:24.12:0,24,289	0/0:9,0:9:8.45:0,8,181	1/1:7,1:8:21.11:131,21,0	0/1:5,0:5:3.86:4,0,78	0/0:14,0:13:26.97:0,27,331	0/0:5,0:4:9.46:0,9,106	0/1:9,0:10:61.74:62,0,164	0/1:15,0:14:81.10:81,0,157	0/0:23,0:23:56.60:0,57,724	1/1:24,1:24:16.57:290,17,0	1/1:14,0:14:19.25:111,19,0	0/1:13,0:9:35.18:35,0,86	0/1:15,2:16:99:101,0,189	1/1:9,0:10:2.35:132,2,0	0/1:14,0:14:45.48:45,0,178	1/1:6,0:6:4.17:59,4,0
chr10	104007466	.	GTGA	G	1674.28	PASS	AB=0.963;AC=22;AF=0.393;AN=56;BaseQRankSum=7.814;DP=423;FS=72.311;HRun=0;HaplotypeScore=179.4892;InbreedingCoeff=0.0676;MQ=51.96;MQ0=6;MQRankSum=-5.910;QD=7.38;ReadPosRankSum=-3.946;VQSLOD=-0.1929;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:0.32:0,0,874	0/1:12,0:12:4.92:5,0,205	0/0:16,0:9:10.74:0,11,46	0/0:10,0:3:6:0,6,71	1/1:6,8:14:26.92:393,27,0	0/0:19,1:20:3.53:0,4,374	0/0:16,0:16:27.82:0,28,434	0/1:18,1:19:29.37:29,0,222	0/1:11,1:12:38.55:39,0,215	0/1:7,0:7:2.88:3,0,151	0/1:10,0:11:28.30:28,0,133	0/1:15,0:15:19.81:20,0,222	0/0:16,0:16:44.53:0,45,557	0/1:11,0:11:16.79:17,0,267	1/1:6,4:10:12.06:231,12,0	0/1:5,1:6:22.52:23,0,151	0/0:16,0:15:28.99:0,29,476	0/0:8,0:7:15.52:0,16,226	0/0:13,0:13:16.04:0,16,193	0/1:12,2:14:30.24:30,0,176	0/0:30,0:30:69.82:0,70,1027	1/1:17,6:23:37.67:398,38,0	0/1:15,1:18:62.99:63,0,88	0/1:14,0:11:0.10:0,0,127	0/1:18,0:19:21.29:21,0,252	1/1:7,7:14:25.38:358,25,0	0/0:15,0:16:25.94:0,26,443	1/1:4,3:7:3.41:190,3,0
chr10	104007642	.	T	TA	3802.02	PASS	AB=0.875;AC=53;AF=0.946;AN=56;BaseQRankSum=0.577;DP=485;FS=27.260;HRun=0;HaplotypeScore=165.3865;InbreedingCoeff=0.4215;MQ=73.16;MQ0=0;MQRankSum=5.775;QD=8.02;ReadPosRankSum=1.592;VQSLOD=2.0920;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:41:36.17:285,36,0	1/1:6,0:6:9.86:45,10,0	0/1:12,2:13:67.63:68,0,82	0/0:8,2:11:13.15:0,13,86	1/1:10,0:9:7.11:36,7,0	1/1:14,0:14:27.51:129,28,0	1/1:24,0:24:47.10:217,47,0	1/1:26,0:26:41.99:216,42,0	1/1:13,0:13:32.06:154,32,0	1/1:13,0:13:24.64:144,25,0	1/1:10,0:10:11.34:62,11,0	1/1:30,0:30:46.98:249,47,0	1/1:17,0:17:17.74:124,18,0	1/1:17,0:17:35.32:162,35,0	1/1:12,0:12:13.09:110,13,0	1/1:15,0:15:31.47:170,31,0	1/1:26,0:26:52.33:241,52,0	1/1:11,0:11:21.48:86,21,0	1/1:15,0:15:29.84:146,30,0	1/1:13,0:13:5.69:92,6,0	1/1:33,0:33:55.91:275,56,0	1/1:19,0:19:12.28:80,12,0	1/1:12,0:12:16.73:108,17,0	1/1:23,0:23:47.46:209,47,0	1/1:11,0:11:5.37:43,5,0	1/1:23,0:23:43.76:222,44,0	1/1:21,0:21:17.83:92,18,0	1/1:5,0:5:5.37:36,5,0
chr10	104008519	.	GA	G	1965.99	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.965;DP=498;FS=7.740;HRun=9;HaplotypeScore=54.3718;InbreedingCoeff=0.9685;MQ=77.10;MQ0=0;MQRankSum=0.343;QD=20.27;ReadPosRankSum=1.865;VQSLOD=4.2039;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:63.15:0,63,713	0/0:5,0:5:12.04:0,12,138	0/0:18,0:17:29.52:0,30,332	0/0:18,0:18:6.50:0,7,159	1/1:0,20:20:54.02:494,54,0	0/0:18,0:19:57.09:0,57,628	0/0:19,0:19:51.11:0,51,574	0/0:25,0:25:42.33:0,42,684	0/0:15,0:15:45.09:0,45,504	0/0:17,0:17:48.14:0,48,554	0/0:17,0:17:45.10:0,45,503	0/0:18,0:18:51.09:0,51,558	0/0:16,0:16:45.09:0,45,504	0/0:8,0:8:18.05:0,18,208	1/1:3,17:20:45.01:412,45,0	0/0:14,0:14:38.99:0,39,406	0/0:25,0:25:66.11:0,66,732	0/0:22,0:22:51.15:0,51,588	0/0:17,0:17:42.11:0,42,474	0/0:23,0:23:57.61:0,58,645	0/0:15,0:15:39.12:0,39,450	1/1:1,14:15:42.02:384,42,0	0/0:13,0:13:33.10:0,33,376	0/0:17,0:17:45.11:0,45,508	0/0:14,0:14:42.12:0,42,485	1/1:2,13:15:39.02:357,39,0	0/0:20,0:20:23.60:0,24,485	1/1:9,18:27:54.02:494,54,0
chr10	104009064	.	AG	A	1050.26	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=0.392;DP=238;FS=3.323;HRun=9;HaplotypeScore=30.5062;InbreedingCoeff=0.8299;MQ=69.33;MQ0=1;MQRankSum=1.611;QD=14.59;ReadPosRankSum=0.199;VQSLOD=2.7046;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:15:25.26:222,25,0	0/0:5,0:5:11.77:0,12,115	0/0:15,0:9:13.74:0,14,113	0/0:13,0:6:5.61:0,6,79	0/0:3,0:3:6.02:0,6,69	0/0:11,0:11:21.06:0,21,242	0/0:13,0:12:33.04:0,33,349	1/1:6,10:16:30:274,30,0	0/0:8,0:8:16.87:0,17,183	0/0:2,0:2:6.02:0,6,69	0/0:6,0:6:15.04:0,15,173	0/0:5,0:5:11.79:0,12,98	0/0:6,0:6:15.04:0,15,170	0/0:8,0:8:23.98:0,24,240	0/0:5,0:4:11.44:0,11,90	0/0:8,0:8:17.75:0,18,169	0/0:11,0:11:26.34:0,26,267	0/0:13,0:13:33.10:0,33,378	1/1:3,7:10:20.96:184,21,0	1/1:2,3:5:10.56:86,11,0	1/1:2,16:18:36.02:329,36,0	0/0:2,0:2:6.02:0,6,69	0/0:5,0:5:12.04:0,12,137	0/0:12,0:12:27.02:0,27,289	0/0:5,0:5:15.04:0,15,173	0/0:6,0:6:5.08:0,5,160	1/1:5,3:8:15.01:135,15,0	0/0:4,0:4:8.24:0,8,76
chr10	104011338	.	T	TG	696.02	PASS	AB=0.688;AC=9;AF=0.161;AN=56;BaseQRankSum=5.200;DP=514;FS=15.378;HRun=9;HaplotypeScore=68.3829;InbreedingCoeff=0.7968;MQ=66.56;MQ0=0;MQRankSum=-1.599;QD=9.53;ReadPosRankSum=-3.804;VQSLOD=-0.0481;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:72.08:0,72,732	0/0:6,0:6:14.99:0,15,130	0/0:20,0:20:0.52:0,1,190	0/0:14,0:13:26.93:0,27,225	0/0:14,0:14:29.98:0,30,260	0/0:12,0:12:26.99:0,27,234	0/0:23,1:24:50.97:0,51,438	1/1:14,2:14:10.58:120,11,0	0/0:14,0:14:29.99:0,30,260	0/0:18,0:19:47.02:0,47,397	0/0:21,0:21:41.92:0,42,354	0/0:20,0:20:53.97:0,54,467	0/0:19,0:19:53.99:0,54,469	0/0:16,0:16:41.97:0,42,359	0/0:18,0:18:41.97:0,42,363	0/0:21,0:21:50.99:0,51,443	0/0:36,0:36:80.83:0,81,676	0/0:21,0:21:53.94:0,54,460	1/1:1,3:4:6.02:66,6,0	1/1:11,1:12:14.97:130,15,0	1/1:20,10:29:41.96:394,42,0	0/0:15,0:15:37.68:0,38,325	0/0:15,0:15:38.98:0,39,338	0/0:27,0:26:59.93:0,60,510	0/0:20,0:20:47.67:0,48,402	0/0:18,0:18:32.96:0,33,284	0/1:6,5:11:5.03:138,0,5	0/0:7,0:7:18:0,18,156
chr10	104011350	.	GGACA	G	1200.23	PASS	AB=0.959;AC=12;AF=0.214;AN=56;BaseQRankSum=3.453;DP=492;FS=15.731;HRun=0;HaplotypeScore=85.3324;InbreedingCoeff=0.5412;MQ=63.53;MQ0=6;MQRankSum=0.053;QD=10.26;ReadPosRankSum=-4.090;VQSLOD=0.2639;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:14.20:0,14,1196	0/0:5,0:5:12.04:0,12,277	0/0:26,0:20:29.97:0,30,629	0/0:18,0:13:7.32:0,7,221	0/1:15,0:15:21.86:22,0,493	0/0:11,0:11:24.06:0,24,461	0/0:23,1:24:5.22:0,5,1079	0/1:12,1:10:27.93:190,0,28	0/0:12,0:12:33.08:0,33,695	0/1:19,1:20:9.83:10,0,802	0/0:16,0:16:30.10:0,30,676	0/0:19,0:19:39.13:0,39,933	0/0:18,0:18:42.14:0,42,993	0/0:17,0:17:45.13:0,45,956	0/0:19,0:19:39.13:0,39,865	0/0:21,0:21:54.17:0,54,1218	0/0:32,0:32:84.25:0,84,1999	0/1:20,1:21:0.82:1,0,974	1/1:5,0:4:6.01:74,6,0	1/1:9,2:11:11.68:153,12,0	1/1:20,5:25:48.07:694,48,0	0/0:17,0:17:45.15:0,45,1053	0/0:17,0:17:36.12:0,36,833	0/0:23,0:22:42.13:0,42,971	0/0:21,0:21:42.14:0,42,943	0/0:17,0:17:36.12:0,36,848	1/1:4,3:7:15.51:218,16,0	0/0:7,0:7:21.07:0,21,497
chr10	104011502	.	GGGGA	G	160.51	PASS	AB=1.000;AC=3;AF=0.056;AN=54;BaseQRankSum=3.359;DP=332;FS=0.000;HRun=0;HaplotypeScore=62.2524;InbreedingCoeff=0.3661;MQ=72.58;MQ0=3;MQRankSum=0.910;QD=5.53;ReadPosRankSum=0.166;VQSLOD=1.5483;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:24:0,24,347	0/0:7,0:7:6.01:0,6,99	0/1:15,0:12:8.84:9,0,42	0/0:27,0:21:5.58:0,6,46	0/0:9,0:9:15.03:0,15,266	0/0:12,0:12:21.06:0,21,464	0/0:14,0:14:30.09:0,30,678	0/0:19,0:18:13.29:0,13,293	0/0:10,0:10:15.04:0,15,295	0/0:13,0:13:27.08:0,27,549	0/0:8,0:8:18.01:0,18,227	1/1:4,10:14:15.05:247,15,0	0/0:15,0:15:31.21:0,31,563	0/0:14,0:14:33.08:0,33,662	0/0:5,0:5:6.02:0,6,147	0/0:15,0:15:36.08:0,36,670	0/0:9,0:9:15:0,15,351	0/0:5,0:5:3.48:0,3,42	./.	0/0:6,0:6:3.01:0,3,73	0/0:22,0:22:39.02:0,39,679	0/0:8,0:8:6.02:0,6,123	0/0:8,0:8:11.99:0,12,191	0/0:7,0:7:15.02:0,15,214	0/0:11,0:11:27.07:0,27,557	0/0:17,0:16:21.06:0,21,398	0/0:15,0:14:26.98:0,27,473	0/0:6,0:6:15:0,15,220
chr10	104012739	.	CT	C	2300.62	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.796;DP=397;FS=7.693;HRun=1;HaplotypeScore=41.6086;InbreedingCoeff=0.9267;MQ=74.69;MQ0=0;MQRankSum=-0.342;QD=34.34;ReadPosRankSum=2.831;VQSLOD=2.8751;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.17:0,81,1195	0/0:3,0:3:9.03:0,9,143	0/0:9,0:9:1.26:0,1,132	0/0:8,0:8:16.34:0,16,200	1/1:1,9:10:21.07:280,21,0	0/0:19,0:19:57.19:0,57,911	0/0:20,0:20:60.20:0,60,954	0/0:16,0:16:48.16:0,48,762	0/0:14,0:14:42.12:0,42,640	0/0:10,0:10:30.10:0,30,478	0/0:6,0:6:15.05:0,15,240	0/0:11,0:11:33.08:0,33,479	0/0:11,0:11:33.11:0,33,513	0/0:26,0:26:78.27:0,78,1247	1/1:0,10:10:27.09:377,27,0	0/0:10,0:10:30.09:0,30,458	0/0:30,0:30:90.27:0,90,1389	0/0:17,0:17:48.10:0,48,715	0/0:11,0:11:30.09:0,30,449	0/0:10,0:10:30.10:0,30,475	0/0:29,0:29:84.29:0,84,1328	1/1:0,12:12:33.11:458,33,0	0/0:6,0:6:18.06:0,18,287	0/0:16,0:16:45.13:0,45,694	0/0:7,0:7:21.07:0,21,333	1/1:0,22:22:60.14:814,60,0	0/0:13,0:13:39.13:0,39,619	1/1:0,13:13:39.13:545,39,0
chr10	104013524	.	AACAC	A	1153.11	PASS	AB=0.925;AC=23;AF=0.460;AN=50;BaseQRankSum=5.017;DP=541;FS=2.721;HRun=0;HaplotypeScore=96.9468;InbreedingCoeff=0.5807;MQ=68.20;MQ0=8;MQRankSum=-1.849;QD=4.59;ReadPosRankSum=1.594;VQSLOD=1.8212;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:34:29.49:0,29,582	0/0:5,0:7:8.50:0,8,95	./.	./.	1/1:15,3:19:15.05:226,15,0	1/1:8,1:9:3.01:46,3,0	0/0:20,0:22:14.79:0,15,293	./.	0/0:18,0:18:18.06:0,18,394	0/1:18,0:21:20.84:21,0,378	0/0:12,0:12:15.05:0,15,313	0/0:11,0:12:14.75:0,15,177	0/1:14,1:16:9.95:63,0,10	0/0:17,0:17:17.78:0,18,333	1/1:15,7:23:21.06:302,21,0	0/0:20,0:21:23.82:0,24,479	0/0:21,0:23:28.77:0,29,479	0/0:17,0:18:15.59:0,16,458	1/1:11,0:10:3:27,3,0	1/1:14,0:19:6.01:56,6,0	1/1:21,1:20:3.01:46,3,0	1/1:24,3:28:9.03:139,9,0	0/0:12,0:14:5.49:0,5,24	0/1:32,1:33:16.32:16,0,555	0/0:13,0:13:6.02:0,6,140	1/1:21,2:23:8.86:106,9,0	1/1:6,1:13:17.68:185,18,0	1/1:10,1:12:9.02:101,9,0
chr10	104013606	.	GAGACAGAGAC	G	3412.98	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=8.635;DP=662;FS=6.926;HRun=0;HaplotypeScore=215.6333;InbreedingCoeff=0.8527;MQ=57.39;MQ0=10;MQRankSum=-5.819;QD=29.68;ReadPosRankSum=-0.804;VQSLOD=2.3393;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:90.31:0,90,3794	0/0:7,0:7:11.96:0,12,431	0/0:31,0:22:9.03:0,9,299	0/0:50,0:30:29.57:0,30,636	1/1:6,17:23:24.08:608,24,0	0/0:20,0:20:39.13:0,39,1655	0/0:26,0:26:60.19:0,60,2093	0/0:27,0:26:42.14:0,42,1167	0/0:20,0:20:37.17:0,37,1528	0/0:26,0:25:60.21:0,60,2342	0/0:16,0:16:27.09:0,27,1018	0/0:23,0:23:57.19:0,57,2365	0/0:20,0:20:51.13:0,51,1916	0/0:26,0:26:60.21:0,60,2602	1/1:8,18:26:32.70:974,33,0	0/0:20,0:20:48.15:0,48,1692	0/0:39,0:38:90.31:0,90,3811	0/1:15,0:14:13.52:14,0,627	0/0:13,0:12:20.99:0,21,292	0/0:26,0:26:27.33:0,27,293	0/0:22,0:22:9.03:0,9,250	1/1:5,10:14:15.05:400,15,0	0/0:17,0:17:45.13:0,45,1748	0/0:36,0:36:81.27:0,81,3196	0/0:15,0:15:39.13:0,39,1477	1/1:8,16:23:42.11:988,42,0	0/0:24,0:24:35.02:0,35,427	1/1:4,8:12:15.05:429,15,0
chr10	104013642	.	CAGAGAGATGG	C	4031.13	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.069;DP=725;FS=9.090;HRun=0;HaplotypeScore=235.5798;InbreedingCoeff=0.9530;MQ=65.82;MQ0=9;MQRankSum=-6.752;QD=38.03;ReadPosRankSum=-0.261;VQSLOD=1.7056;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,105,4508	0/0:8,0:8:18.06:0,18,795	0/0:50,0:30:67.23:0,67,2219	0/0:75,0:48:55.07:0,55,2370	0/0:27,0:27:55.70:0,56,1289	0/0:14,0:14:36.11:0,36,1443	0/0:28,0:28:78.21:0,78,3078	1/1:9,18:26:51.08:1123,51,0	0/0:23,0:23:57.20:0,57,2667	0/0:36,0:35:81.28:0,81,3588	0/0:18,0:18:48.16:0,48,2171	0/0:25,0:25:66.21:0,66,2839	0/0:23,0:23:66.23:0,66,2922	0/0:26,0:26:69.22:0,69,3071	0/0:23,0:23:43.30:0,43,665	0/0:20,0:20:57.19:0,57,2597	0/0:37,0:37:87.26:0,87,3739	0/0:12,0:12:26.79:0,27,1227	1/1:2,15:16:45.15:1077,45,0	1/1:0,17:17:17.78:546,18,0	1/1:8,16:24:3.01:40,3,0	0/0:13,0:12:20.70:0,21,384	0/0:19,0:19:57.20:0,57,2548	0/0:39,0:39:99:0,105,4799	0/0:19,0:19:51.13:0,51,2256	0/0:24,0:23:57.12:0,57,1697	1/1:1,20:21:42.12:1245,42,0	0/0:20,0:20:48.13:0,48,1503
chr10	104014915	.	AT	A	2112.81	PASS	AB=0.873;AC=24;AF=0.429;AN=56;BaseQRankSum=11.999;DP=678;FS=1.049;HRun=13;HaplotypeScore=81.4381;InbreedingCoeff=0.7018;MQ=62.61;MQ0=0;MQRankSum=2.006;QD=6.40;ReadPosRankSum=4.328;VQSLOD=2.6607;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,2:45:75.85:0,76,984	0/0:9,0:9:21:0,21,196	0/1:13,1:14:6.85:7,0,95	0/0:5,0:5:6:0,6,53	1/1:5,1:25:31.63:105,32,0	0/0:15,2:18:7.56:0,8,374	0/0:24,2:28:16.84:0,17,452	1/1:6,17:25:51.67:354,52,0	0/0:22,2:28:21.64:0,22,456	0/1:27,4:32:6.89:7,0,541	0/1:14,4:18:29.80:30,0,195	0/0:17,0:17:29.13:0,29,316	0/1:14,3:17:20.75:21,0,282	0/0:32,3:35:38.88:0,39,482	1/1:8,0:37:48.84:141,49,0	0/0:24,1:26:38:0,38,503	0/0:31,0:35:53.79:0,54,674	0/0:24,3:27:35.02:0,35,463	1/1:11,11:24:25.56:257,26,0	1/1:5,20:25:47.61:350,48,0	1/1:2,25:27:56.64:416,57,0	1/1:2,0:23:37.11:107,37,0	0/0:24,1:26:38.02:0,38,515	0/0:22,0:22:56.95:0,57,522	0/0:24,1:27:18.78:0,19,460	1/1:4,0:34:59.83:176,60,0	1/1:3,17:22:45.75:315,46,0	1/1:0,0:7:14.26:41,14,0
chr10	104015098	.	T	TGTATCCTGTCTTATCTCAAATACA	39956.28	PASS	AB=0.786;AC=55;AF=0.982;AN=56;BaseQRankSum=0.365;DP=273;FS=18.063;HRun=0;HaplotypeScore=305.8384;InbreedingCoeff=-0.0463;MQ=76.30;MQ0=0;MQRankSum=-2.552;QD=146.36;ReadPosRankSum=2.227;VQSLOD=3.4774;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:9.03:794,9,0	1/1:6,0:6:15.05:1085,15,0	1/1:6,2:11:0.65:2043,1,0	0/1:8,0:11:23.04:1568,0,23	1/1:19,0:19:33.56:2175,34,0	1/1:9,0:9:18.06:1380,18,0	1/1:7,0:7:16.61:927,17,0	1/1:14,0:14:39.13:2666,39,0	1/1:11,0:11:23.11:1476,23,0	1/1:11,0:11:30.10:2023,30,0	1/1:12,0:12:18.05:1148,18,0	1/1:8,0:8:15.05:714,15,0	1/1:5,0:5:12.04:643,12,0	1/1:10,0:10:21.07:1491,21,0	1/1:15,0:15:38.87:3030,39,0	1/1:7,0:7:18.04:1240,18,0	1/1:5,0:5:12.04:797,12,0	1/1:6,0:6:6.02:396,6,0	1/1:9,0:9:18.06:1029,18,0	1/1:9,0:9:21.07:1844,21,0	1/1:9,0:9:15.05:980,15,0	1/1:12,0:12:22.63:1674,23,0	1/1:10,0:10:15.94:1290,16,0	1/1:1,0:1:3.01:311,3,0	1/1:15,0:15:33.11:2141,33,0	1/1:13,0:13:33.01:1982,33,0	1/1:14,0:14:33.39:2447,33,0	1/1:6,0:6:15:661,15,0
chr10	104016298	.	G	GT	778.09	PASS	AB=0.826;AC=12;AF=0.214;AN=56;BaseQRankSum=13.293;DP=768;FS=152.531;HRun=0;HaplotypeScore=230.2541;InbreedingCoeff=-0.2554;MQ=47.21;MQ0=10;MQRankSum=-10.893;QD=2.75;ReadPosRankSum=-0.103;VQSLOD=-0.5197;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,1:37:77.53:0,78,986	0/0:6,2:8:8.49:0,8,179	0/0:59,0:21:54.12:0,54,690	0/0:62,1:30:65.17:0,65,755	0/0:14,3:17:8.43:0,8,234	0/1:17,3:20:0.80:1,0,402	0/0:23,0:23:66.61:0,67,879	0/1:41,3:44:97.48:97,0,1006	0/0:22,4:26:11.61:0,12,505	0/1:21,7:28:99:295,0,636	0/1:11,3:14:7.22:7,0,145	0/0:26,2:28:19.69:0,20,733	0/0:23,3:26:13.30:0,13,682	0/0:22,4:26:57.62:0,58,705	0/1:18,4:22:21.66:22,0,358	0/0:17,2:19:16.02:0,16,506	0/0:27,0:27:72.61:0,73,941	0/0:20,0:20:57.19:0,57,797	0/0:39,0:37:27.40:0,27,1024	0/1:19,4:23:33.48:33,0,406	0/0:31,0:29:71.90:0,72,951	0/1:21,5:26:8.57:9,0,505	0/1:15,5:20:14.85:15,0,280	0/0:34,1:35:63.68:0,64,989	0/1:13,9:21:5.26:5,0,344	0/1:24,9:33:99:321,0,728	0/1:20,6:26:39.66:40,0,558	0/1:4,1:5:74.38:74,0,82
chr10	104017346	.	A	ATG	320.90	PASS	AB=0.926;AC=30;AF=0.789;AN=38;BaseQRankSum=-2.221;DP=83;FS=0.000;HRun=0;HaplotypeScore=24.0039;InbreedingCoeff=0.1347;MQ=85.77;MQ0=5;MQRankSum=-0.152;QD=4.06;ReadPosRankSum=-2.769;VQSLOD=0.9750;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:2,0:2:0:0,0,0	./.	0/1:12,0:5:9.75:10,0,43	0/1:15,1:13:49.44:77,0,49	./.	1/1:1,4:4:2.97:20,3,0	1/1:1,1:2:2.97:20,3,0	0/1:2,0:2:0:0,0,0	0/1:2,0:2:0:0,0,0	1/1:1,0:1:2.99:24,3,0	1/1:0,2:2:2.97:20,3,0	1/1:0,3:3:8.94:74,9,0	1/1:2,0:2:0.89:2,1,0	1/1:1,2:3:2.83:21,3,0	0/1:0,3:3:0:0,0,0	./.	1/1:0,4:4:5.94:40,6,0	./.	1/1:7,0:7:3.44:21,3,0	./.	0/1:2,0:2:0:0,0,0	./.	./.	1/1:3,1:4:2.97:20,3,0	1/1:3,0:3:8.90:59,9,0	./.	./.	0/1:1,0:1:0:0,0,0
chr10	104017582	.	G	GGT	7409.89	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-7.448;DP=808;FS=4.804;HRun=0;HaplotypeScore=169.6920;InbreedingCoeff=0.9606;MQ=58.32;MQ0=13;MQRankSum=-0.460;QD=28.28;ReadPosRankSum=-1.546;VQSLOD=5.6572;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,104,1296	0/0:4,0:4:9.03:0,9,113	0/0:55,0:25:28.72:0,29,217	0/0:66,0:34:22.63:0,23,268	1/1:7,8:15:27.09:439,27,0	0/0:19,0:20:43.85:0,44,515	0/0:29,0:29:78.23:0,78,965	1/1:14,27:41:54.01:1256,54,0	0/0:25,0:26:22.42:0,22,535	0/0:42,0:42:96.04:0,96,1178	0/0:15,0:15:20.97:0,21,256	0/0:25,0:24:51.16:0,51,638	0/0:27,0:27:66.01:0,66,760	0/0:31,0:30:63.03:0,63,781	1/1:2,17:21:42.14:698,42,0	0/0:17,0:17:35.96:0,36,438	0/0:36,0:35:73.73:0,74,952	0/0:25,0:26:40.03:0,40,763	1/1:11,16:28:53.72:808,54,0	1/1:4,15:19:41.89:695,42,0	1/1:20,43:63:89.88:1466,90,0	1/1:9,11:19:34.36:535,34,0	0/0:18,0:18:30.09:0,30,373	0/0:37,0:36:42.93:0,43,514	0/0:20,0:20:26.50:0,27,369	1/1:16,13:28:61.21:854,61,0	1/1:8,12:20:4.67:562,5,0	1/1:3,1:4:8.99:97,9,0
chr10	104017614	.	TTGTG	T	726.94	PASS	AB=0.960;AC=26;AF=0.520;AN=50;BaseQRankSum=4.216;DP=752;FS=9.783;HRun=0;HaplotypeScore=184.3973;InbreedingCoeff=0.3402;MQ=46.49;MQ0=42;MQRankSum=-0.109;QD=1.87;ReadPosRankSum=-1.854;VQSLOD=1.1827;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:38.99:0,39,581	./.	./.	./.	0/1:9,0:9:0:0,0,0	0/1:25,0:25:15.92:16,0,340	0/0:28,0:25:9:0,9,162	0/0:35,0:34:2.88:0,3,15	1/1:16,4:21:8.96:114,9,0	0/0:41,0:41:29.84:0,30,396	0/0:12,0:12:0.89:0,1,2	0/1:24,2:26:0.66:67,0,1	1/1:23,0:25:4.73:208,5,0	0/1:29,2:29:13.48:67,0,13	0/1:21,0:23:9.89:22,0,10	0/0:16,0:16:11.92:0,12,181	0/0:34,0:30:39.03:0,39,699	0/0:28,0:28:21.80:0,22,373	1/1:23,0:19:3:26,3,0	1/1:18,0:18:1.30:3,1,0	1/1:66,0:63:1.87:32,2,0	1/1:19,0:14:1.55:4,2,0	1/1:12,5:16:5.99:91,6,0	1/1:27,7:32:6.43:75,6,0	0/0:16,0:16:11.68:0,12,92	0/1:30,0:29:19.15:91,0,19	1/1:13,0:14:2.16:8,2,0	1/1:4,0:6:7.24:55,7,0
chr10	104018058	.	GCA	G	423.72	PASS	AB=0.891;AC=19;AF=0.380;AN=50;BaseQRankSum=5.976;DP=562;FS=7.127;HRun=0;HaplotypeScore=81.5558;InbreedingCoeff=0.0780;MQ=66.36;MQ0=16;MQRankSum=-1.173;QD=1.59;ReadPosRankSum=0.969;VQSLOD=0.9980;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:21.05:0,21,279	0/0:3,0:4:6.01:0,6,70	./.	./.	1/1:17,0:17:5.68:28,6,0	0/1:12,3:15:20.20:20,0,120	0/1:29,3:31:40.70:41,0,208	./.	0/1:11,3:14:78.69:79,0,87	0/1:22,0:20:6.94:7,0,44	0/0:9,0:9:5.56:0,6,65	0/0:15,0:15:11.98:0,12,176	0/1:16,1:17:35.38:35,0,107	0/1:18,2:21:54.62:55,0,131	1/1:11,0:10:8.52:42,9,0	0/1:12,2:14:20.19:20,0,118	0/1:23,4:27:77.70:78,0,267	0/0:25,0:27:31.10:0,31,342	0/0:9,0:9:2.61:0,3,24	0/0:16,0:14:5.53:0,6,49	0/0:61,0:61:44.99:0,45,487	1/1:20,0:18:1.33:34,1,0	0/0:15,0:16:12.85:0,13,141	0/1:26,3:29:5.18:5,0,288	0/0:12,0:12:6.49:0,6,87	1/1:16,0:15:10.51:55,11,0	0/0:14,0:16:6.91:0,7,188	1/1:10,0:10:17.04:84,17,0
chr10	104018087	.	CACA	C	169.96	PASS	AB=0.831;AC=5;AF=0.089;AN=56;BaseQRankSum=8.122;DP=622;FS=6.455;HRun=0;HaplotypeScore=102.3485;InbreedingCoeff=-0.0975;MQ=53.72;MQ0=18;MQRankSum=-1.744;QD=1.81;ReadPosRankSum=5.142;VQSLOD=1.0795;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:72.21:0,72,1172	0/0:10,0:10:27.09:0,27,396	0/0:15,0:4:12.04:0,12,151	0/0:20,0:14:41.12:0,41,480	0/1:19,3:22:9.91:10,0,186	0/0:18,0:18:36.01:0,36,576	0/0:31,0:30:56.96:0,57,981	0/0:19,0:18:52.67:0,53,627	0/0:21,0:21:62.89:0,63,868	0/0:24,0:22:66.22:0,66,956	0/0:8,0:8:21.07:0,21,343	0/0:18,0:18:45.15:0,45,722	0/0:22,0:22:63.09:0,63,918	0/0:24,0:24:51.81:0,52,838	0/1:15,2:16:82.51:83,0,128	0/0:19,0:19:42.03:0,42,645	0/0:30,0:29:72.65:0,73,1166	0/0:30,0:30:87.27:0,87,1451	0/0:15,0:15:45.13:0,45,582	0/0:15,0:13:33.11:0,33,480	0/0:61,0:60:99:0,141,2319	0/1:17,5:20:24.96:25,0,140	0/0:20,0:20:51.17:0,51,819	0/0:35,0:34:90.19:0,90,1402	0/0:17,0:17:42.14:0,42,633	0/1:19,3:22:35.66:36,0,222	0/0:21,0:21:52:0,52,914	0/1:6,5:11:54.39:132,0,54
chr10	104019506	.	CCTA	C	454.85	PASS	AB=0.848;AC=3;AF=0.054;AN=56;BaseQRankSum=3.852;DP=653;FS=5.062;HRun=0;HaplotypeScore=109.0569;InbreedingCoeff=-0.0599;MQ=62.11;MQ0=5;MQRankSum=-2.922;QD=7.22;ReadPosRankSum=-5.347;VQSLOD=0.2639;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,151,3460	0/0:8,0:8:24.08:0,24,554	0/0:47,0:30:66.66:0,67,2007	0/0:36,0:25:69.21:0,69,1555	0/0:21,5:26:54.15:0,54,1168	0/0:22,0:22:60.19:0,60,1286	0/0:29,0:29:87.28:0,87,1941	0/0:22,1:23:12.60:0,13,1415	0/0:18,0:18:41.73:0,42,905	0/0:23,0:23:62.72:0,63,1531	0/0:6,0:6:18.05:0,18,393	0/0:16,0:16:45.15:0,45,1089	0/0:18,0:18:51.12:0,51,1144	0/0:22,0:22:63.21:0,63,1466	0/0:7,0:7:15.02:0,15,292	0/0:11,0:11:33.11:0,33,772	0/0:35,0:35:99:0,103,2242	0/0:19,0:19:57.20:0,57,1333	0/1:16,6:22:99:254,0,982	0/0:10,0:10:21.02:0,21,384	0/0:48,13:60:99:0,126,2965	0/1:16,0:15:13.30:13,0,700	0/0:18,0:18:14.03:0,14,1069	0/0:36,0:36:99:0,105,2377	0/0:22,0:22:66.22:0,66,1506	0/1:16,8:24:99:285,0,878	0/0:13,0:13:33.10:0,33,650	0/0:8,0:8:12.04:0,12,281
chr10	104020092	.	G	GAGAGAC	3040.98	PASS	AB=0.647;AC=9;AF=0.161;AN=56;BaseQRankSum=-6.503;DP=761;FS=0.630;HRun=0;HaplotypeScore=175.0405;InbreedingCoeff=0.8517;MQ=64.44;MQ0=7;MQRankSum=-5.749;QD=23.39;ReadPosRankSum=0.854;VQSLOD=3.2389;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,102,1993	0/0:13,0:13:24.08:0,24,508	0/0:39,0:18:30.05:0,30,516	0/0:74,0:45:31.07:0,31,772	1/1:5,17:23:7.70:295,8,0	0/0:18,0:18:48.15:0,48,976	0/0:25,0:25:54.17:0,54,960	0/0:34,0:33:42.12:0,42,716	0/0:19,0:19:43.36:0,43,880	0/0:28,0:28:60.19:0,60,1156	0/0:13,0:13:30.09:0,30,596	0/0:23,0:23:57.20:0,57,1176	0/0:29,0:29:72.23:0,72,1483	0/0:16,0:16:30.10:0,30,607	1/1:7,28:35:26.11:891,26,0	0/0:30,0:30:66.20:0,66,1262	0/0:18,0:18:42.14:0,42,874	0/0:28,0:28:51.16:0,51,991	0/0:19,0:19:33.10:0,33,625	0/0:17,0:17:38.70:0,39,718	0/0:31,0:31:63.18:0,63,1211	1/1:8,19:28:14.87:431,15,0	0/0:25,0:25:53.82:0,54,1023	0/0:35,0:35:61.37:0,61,1162	0/0:21,0:21:45.15:0,45,894	0/1:15,16:32:6.35:1280,0,6	0/0:28,0:28:69.24:0,69,1398	1/1:1,6:10:9.03:298,9,0
chr10	104020690	.	C	CG	12137.32	PASS	AB=0.841;AC=54;AF=0.964;AN=56;BaseQRankSum=-0.411;DP=553;FS=16.965;HRun=4;HaplotypeScore=291.3707;InbreedingCoeff=-0.0378;MQ=62.26;MQ0=3;MQRankSum=-1.505;QD=21.95;ReadPosRankSum=2.319;VQSLOD=0.5511;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:32,1:33:78.27:725,78,0	1/1:10,0:10:27.02:254,27,0	0/1:21,6:21:58.77:314,0,59	0/1:15,3:16:51.15:190,0,51	1/1:20,2:23:56.34:518,56,0	1/1:19,2:21:53.44:532,53,0	1/1:22,1:22:62.51:594,63,0	1/1:13,1:14:35.62:425,36,0	1/1:22,0:23:65.49:554,65,0	1/1:15,1:16:31.51:269,32,0	1/1:17,0:17:45.78:419,46,0	1/1:29,1:30:81.85:706,82,0	1/1:20,3:22:49.14:430,49,0	1/1:21,0:21:50.83:449,51,0	1/1:23,1:24:59.36:529,59,0	1/1:21,0:21:62.14:578,62,0	1/1:17,3:19:44.65:430,45,0	1/1:11,1:11:27.04:291,27,0	1/1:20,5:24:60.15:680,60,0	1/1:22,2:24:56.50:537,57,0	1/1:14,0:14:29.98:320,30,0	1/1:17,1:18:30.01:292,30,0	1/1:11,0:11:18.02:184,18,0	1/1:16,2:18:41.90:377,42,0	1/1:15,0:15:38.40:355,38,0	1/1:16,0:16:30.91:319,31,0	1/1:28,0:28:77.05:694,77,0	1/1:7,0:7:18.03:174,18,0
chr10	104020694	.	GT	G	13414.05	PASS	AB=0.899;AC=54;AF=0.964;AN=56;BaseQRankSum=-0.458;DP=527;FS=5.434;HRun=1;HaplotypeScore=281.4345;InbreedingCoeff=-0.0378;MQ=63.23;MQ0=3;MQRankSum=-1.642;QD=25.45;ReadPosRankSum=2.628;VQSLOD=4.0964;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,23:30:82.36:760,82,0	1/1:2,8:10:29.57:317,30,0	0/1:28,4:23:42.81:194,0,43	0/1:17,2:16:58.41:117,0,58	1/1:8,13:21:56.60:558,57,0	1/1:8,13:21:56.15:531,56,0	1/1:5,17:21:62.60:646,63,0	1/1:10,4:14:37.57:288,38,0	1/1:4,19:23:68.64:779,69,0	1/1:6,8:14:35.44:362,35,0	1/1:4,13:17:47.75:504,48,0	1/1:6,24:30:89.29:932,89,0	1/1:7,15:21:56.23:576,56,0	1/1:4,14:18:52.91:566,53,0	1/1:2,19:21:59.93:682,60,0	1/1:4,17:21:62.56:696,63,0	1/1:5,13:17:47.47:495,47,0	1/1:3,8:10:26.53:238,27,0	1/1:11,12:22:62.18:593,62,0	1/1:8,15:23:59.29:592,59,0	1/1:7,7:14:26.33:195,26,0	1/1:7,10:17:37.91:356,38,0	1/1:3,7:10:17.92:188,18,0	1/1:7,9:16:41.75:409,42,0	1/1:5,9:14:38.89:421,39,0	1/1:5,7:12:32.77:320,33,0	1/1:5,21:26:77.93:872,78,0	1/1:1,6:7:18.06:230,18,0
chr10	104020708	.	GAA	G	4432.66	PASS	AB=1.000;AC=54;AF=0.964;AN=56;BaseQRankSum=1.304;DP=498;FS=15.622;HRun=2;HaplotypeScore=389.8825;InbreedingCoeff=-0.0528;MQ=53.64;MQ0=6;MQRankSum=-1.323;QD=8.90;ReadPosRankSum=8.203;VQSLOD=0.0033;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:38:48.92:275,49,0	1/1:11,0:11:19.51:126,20,0	0/1:32,0:20:26.66:27,0,339	0/1:16,0:12:23.67:24,0,212	1/1:16,2:18:31.27:201,31,0	1/1:16,0:16:20.96:174,21,0	1/1:24,0:24:41.19:203,41,0	1/1:17,0:17:5.50:93,6,0	1/1:22,0:22:58.27:325,58,0	1/1:13,0:13:14.17:99,14,0	1/1:13,0:13:28.88:178,29,0	1/1:24,1:25:60.05:300,60,0	1/1:19,0:18:37.10:198,37,0	1/1:20,0:20:31.86:186,32,0	1/1:20,0:20:49.86:238,50,0	1/1:21,0:21:45.69:253,46,0	1/1:16,0:15:30.20:171,30,0	1/1:8,0:7:8.45:61,8,0	1/1:19,0:19:8.98:201,9,0	1/1:21,0:21:14.81:172,15,0	1/1:13,0:13:4.05:27,4,0	1/1:17,1:18:25.48:196,25,0	1/1:8,0:8:11.34:66,11,0	1/1:13,0:13:19.72:102,20,0	1/1:13,0:13:9.97:119,10,0	1/1:13,0:13:12.92:94,13,0	1/1:25,0:25:40.74:220,41,0	1/1:6,0:6:17.57:106,18,0
chr10	104020731	.	C	CA	8525.97	PASS	AB=1.000;AC=54;AF=0.964;AN=56;BaseQRankSum=2.372;DP=413;FS=3.797;HRun=0;HaplotypeScore=365.2116;InbreedingCoeff=0.5377;MQ=41.85;MQ0=1;MQRankSum=-2.551;QD=20.64;ReadPosRankSum=1.733;VQSLOD=3.1928;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:80.22:586,80,0	1/1:1,9:10:21.65:211,22,0	0/1:10,0:7:2.35:2,0,32	0/1:3,0:2:0:0,0,0	1/1:0,15:16:39.67:260,40,0	1/1:0,17:17:44.62:321,45,0	1/1:0,21:20:51.78:373,52,0	1/1:0,21:21:62.16:738,62,0	1/1:0,18:18:50.59:426,51,0	1/1:0,15:15:45.04:491,45,0	1/1:0,8:8:20.73:150,21,0	1/1:0,22:22:59.52:458,60,0	1/1:1,13:15:17.79:283,18,0	1/1:0,20:20:53.43:377,53,0	1/1:0,18:18:47.58:376,48,0	1/1:0,14:14:41.58:304,42,0	1/1:0,13:13:29.71:235,30,0	1/1:0,9:9:26.93:270,27,0	1/1:0,10:10:30.06:344,30,0	1/1:0,18:18:41.72:307,42,0	1/1:0,16:16:32.43:245,32,0	1/1:1,17:18:34.66:264,35,0	1/1:0,9:9:14.70:98,15,0	1/1:0,10:10:17.70:117,18,0	1/1:0,11:11:32.74:235,33,0	1/1:0,13:13:39.04:407,39,0	1/1:1,20:22:59.03:552,59,0	1/1:0,4:4:11.84:95,12,0
chr10	104020734	.	AG	A	2340.46	PASS	AC=54;AF=1.000;AN=54;BaseQRankSum=0.919;DP=407;FS=0.000;HRun=2;HaplotypeScore=400.2652;InbreedingCoeff=-0.0086;MQ=36.05;MQ0=1;MQRankSum=-2.109;QD=5.75;ReadPosRankSum=-0.499;VQSLOD=-0.3498;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,25:32:48.21:159,48,0	1/1:2,8:10:0.71:51,1,0	1/1:7,0:5:0.79:15,1,0	./.	1/1:3,13:16:10.20:47,10,0	1/1:4,13:17:29.86:105,30,0	1/1:3,18:20:29.73:108,30,0	1/1:9,12:21:32.35:166,32,0	1/1:6,12:18:24.23:81,24,0	1/1:4,11:15:30.26:144,30,0	1/1:2,6:8:13.07:42,13,0	1/1:5,17:22:36.73:130,37,0	1/1:5,10:15:6.10:51,6,0	1/1:2,18:20:37.68:130,38,0	1/1:6,12:18:26.50:86,27,0	1/1:3,11:14:23.38:80,23,0	1/1:2,11:13:19.12:60,19,0	1/1:1,8:9:22.51:137,23,0	1/1:3,7:10:19.63:103,20,0	1/1:5,13:18:29.71:99,30,0	1/1:4,12:16:22.94:80,23,0	1/1:5,13:18:23.31:84,23,0	1/1:1,8:9:12.33:57,12,0	1/1:2,8:10:11.09:34,11,0	1/1:0,11:11:25.12:84,25,0	1/1:3,10:13:27.44:127,27,0	1/1:8,14:22:26.72:110,27,0	1/1:0,4:4:10.13:43,10,0
chr10	104020737	.	CG	C	4693.27	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=1.697;DP=314;FS=3.518;HRun=2;HaplotypeScore=337.7350;InbreedingCoeff=0.6391;MQ=32.21;MQ0=0;MQRankSum=-1.732;QD=15.09;ReadPosRankSum=1.720;VQSLOD=3.7772;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:62.80:326,63,0	1/1:0,9:9:25.70:134,26,0	0/0:2,1:2:1.25:0,1,3	./.	1/1:1,13:14:36.43:168,36,0	1/1:0,13:13:37.31:199,37,0	1/1:0,18:17:48.37:248,48,0	1/1:0,12:12:35.48:232,35,0	1/1:0,12:12:34.40:180,34,0	1/1:0,11:11:32.36:221,32,0	1/1:0,6:6:17.12:88,17,0	1/1:0,17:17:48.53:254,49,0	1/1:0,12:12:33.04:164,33,0	1/1:0,18:18:51.33:265,51,0	1/1:1,12:13:37.39:204,37,0	1/1:0,11:11:31.56:167,32,0	1/1:0,11:11:25.76:178,26,0	1/1:0,8:8:23.85:189,24,0	1/1:0,7:7:20.82:147,21,0	1/1:0,13:13:37.24:193,37,0	1/1:0,12:12:28.43:142,28,0	1/1:0,14:14:39.60:194,40,0	1/1:0,8:8:16.54:94,17,0	1/1:0,8:8:16.71:80,17,0	1/1:0,11:11:31.50:165,32,0	1/1:0,10:10:29.51:187,30,0	1/1:1,13:14:39.05:204,39,0	1/1:0,4:4:11.57:71,12,0
chr10	104020740	.	T	TA	4412.05	PASS	AC=52;AF=1.000;AN=52;BaseQRankSum=-0.652;DP=313;FS=0.000;HRun=1;HaplotypeScore=338.1480;InbreedingCoeff=-0.0032;MQ=28.89;MQ0=0;MQRankSum=0.537;QD=14.19;ReadPosRankSum=1.333;VQSLOD=3.7149;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:61.80:301,62,0	1/1:0,9:9:25.46:128,25,0	./.	./.	1/1:0,13:14:32.97:149,33,0	1/1:0,13:13:37.07:192,37,0	1/1:0,18:17:48.04:239,48,0	1/1:0,12:12:35.09:217,35,0	1/1:0,12:12:34.13:173,34,0	1/1:1,10:11:32.26:203,32,0	1/1:0,6:6:16.87:82,17,0	1/1:0,17:17:48.25:249,48,0	1/1:0,12:12:33.41:163,33,0	1/1:0,18:18:51.03:258,51,0	1/1:0,13:13:37.09:195,37,0	1/1:0,11:11:31.47:165,31,0	1/1:0,11:11:24.28:108,24,0	1/1:0,8:8:23.83:184,24,0	1/1:0,7:7:20.82:146,21,0	1/1:0,13:13:36.89:183,37,0	1/1:0,12:12:27.48:128,27,0	1/1:0,14:14:39.13:185,39,0	1/1:0,8:8:16.39:94,16,0	1/1:0,8:8:16.52:77,17,0	1/1:0,11:11:31.27:159,31,0	1/1:0,10:10:29.48:182,29,0	1/1:1,13:14:18.94:180,19,0	1/1:0,4:4:11.69:72,12,0
chr10	104022351	.	TG	T	860.49	PASS	AB=0.870;AC=15;AF=0.268;AN=56;BaseQRankSum=1.816;DP=387;FS=6.432;HRun=10;HaplotypeScore=60.0655;InbreedingCoeff=0.1880;MQ=80.95;MQ0=0;MQRankSum=0.107;QD=5.15;ReadPosRankSum=1.621;VQSLOD=0.7454;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,1:23:3.33:0,3,216	0/1:7,0:7:5.28:5,0,77	0/0:16,0:16:24:0,24,227	0/1:18,0:17:12.48:12,0,137	0/0:11,0:11:12.02:0,12,124	0/1:10,2:12:31.08:31,0,132	0/0:20,1:21:44.73:0,45,431	0/1:9,6:15:12.34:125,0,12	0/0:11,0:11:21.03:0,21,217	0/0:10,0:10:18.04:0,18,192	0/1:7,2:9:7.80:8,0,126	0/0:12,0:12:1.48:0,1,174	0/0:15,0:15:32.99:0,33,340	0/0:15,0:15:36.06:0,36,371	0/1:18,1:19:15.50:15,0,225	0/0:7,0:7:4.77:0,5,175	0/0:24,1:26:42.86:0,43,634	0/0:14,4:18:7.01:0,7,277	1/1:2,5:7:14.97:129,15,0	1/1:1,6:8:16.89:119,17,0	1/1:6,19:25:25.34:349,25,0	0/0:10,0:10:9.73:0,10,72	0/0:6,0:7:12.02:0,12,122	0/0:14,0:14:33.02:0,33,328	0/1:6,1:7:8.03:8,0,132	0/1:15,1:16:2:2,0,201	0/1:12,11:23:3.58:218,0,4	0/0:4,0:4:9.01:0,9,91
chr10	104023115	.	TCC	T	1445.84	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=0.588;DP=463;FS=2.452;HRun=5;HaplotypeScore=75.2119;InbreedingCoeff=0.8250;MQ=47.34;MQ0=31;MQRankSum=-0.600;QD=8.82;ReadPosRankSum=0.775;VQSLOD=-0.5157;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:16:38.43:0,38,272	0/0:7,0:7:14.82:0,15,125	0/0:28,0:5:5.98:0,6,48	0/0:41,0:5:5.12:0,5,59	1/1:2,7:10:5.30:25,5,0	0/0:26,0:25:52.29:0,52,412	0/0:18,0:16:21.25:0,21,191	1/1:17,0:14:29.70:230,30,0	0/0:17,0:17:33.38:0,33,302	0/0:19,0:17:41.97:0,42,377	0/0:9,0:9:11.97:0,12,102	0/0:18,0:15:12.96:0,13,190	0/0:11,0:10:22.83:0,23,168	0/1:10,0:10:0.50:0,0,111	1/1:19,0:17:15.28:112,15,0	0/0:14,0:14:26.93:0,27,259	0/0:14,0:13:17.96:0,18,328	0/0:14,0:14:14.51:0,15,234	1/1:5,10:10:29.84:223,30,0	1/1:0,10:10:8.84:55,9,0	1/1:25,0:24:32.86:259,33,0	1/1:15,0:15:26.24:202,26,0	0/0:9,0:8:7.63:0,8,67	0/0:18,0:16:23.07:0,23,211	0/0:15,0:15:3.59:0,4,171	1/1:0,11:11:31.68:236,32,0	1/1:17,0:16:23.70:166,24,0	1/1:15,0:13:3.98:141,4,0
chr10	104023255	.	C	CCTCTCTCT	2264.09	PASS	AB=1.000;AC=20;AF=0.370;AN=54;BaseQRankSum=3.574;DP=688;FS=6.101;HRun=0;HaplotypeScore=150.9737;InbreedingCoeff=0.7904;MQ=45.55;MQ0=54;MQRankSum=-5.542;QD=8.51;ReadPosRankSum=-0.487;VQSLOD=2.2524;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:35.06:0,35,684	0/0:10,0:9:11.97:0,12,218	0/1:58,0:4:0:0,0,0	./.	1/1:27,0:25:12.01:148,12,0	0/0:21,0:21:19.91:0,20,426	0/0:19,0:19:33.11:0,33,657	1/1:20,0:14:2.94:18,3,0	0/0:26,0:24:33.03:0,33,720	0/0:17,0:17:17.07:0,17,260	0/0:17,0:17:12.07:0,12,462	0/0:20,0:21:31.49:0,31,552	0/0:12,0:11:18.04:0,18,335	0/0:23,0:24:41.61:0,42,838	1/1:10,5:16:12.04:331,12,0	0/0:15,0:14:21.03:0,21,331	0/0:29,0:28:14.19:0,14,714	0/0:13,0:13:20.28:0,20,419	1/1:25,0:19:8.96:177,9,0	1/1:22,0:20:17.04:232,17,0	0/1:13,0:10:36.74:37,0,51	1/1:13,6:24:9.97:187,10,0	0/0:17,0:16:29.11:0,29,476	0/0:39,0:37:59.57:0,60,1246	0/0:20,0:23:15.52:0,16,236	1/1:27,2:30:51.08:1089,51,0	1/1:9,6:19:8.24:169,8,0	1/1:6,0:6:6:68,6,0
chr10	104023294	.	CTGTGTGTG	C	585.48	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=3.524;DP=547;FS=8.169;HRun=0;HaplotypeScore=154.2456;InbreedingCoeff=0.8263;MQ=47.13;MQ0=21;MQRankSum=-4.959;QD=7.05;ReadPosRankSum=-0.930;VQSLOD=2.0803;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:48.14:0,48,1477	0/0:6,0:6:15.02:0,15,361	./.	./.	1/1:15,9:24:2.98:22,3,0	0/0:21,0:20:30.09:0,30,955	0/0:27,0:25:24.01:0,24,639	0/0:14,0:10:21.02:0,21,274	0/0:25,0:22:39.12:0,39,1236	0/0:15,0:15:24.08:0,24,795	0/0:24,0:23:34.33:0,34,818	0/0:23,0:22:39.13:0,39,1357	0/0:15,0:15:36.10:0,36,1264	0/0:29,0:26:36.09:0,36,1249	1/1:7,5:12:9.03:206,9,0	0/0:13,0:14:21.06:0,21,696	0/0:31,0:31:41.82:0,42,1337	0/0:18,0:18:33.07:0,33,1069	0/0:13,0:10:24.02:0,24,672	0/0:23,0:21:30.09:0,30,1161	0/0:14,0:11:9.50:0,10,333	1/1:11,6:19:6.46:119,6,0	0/0:27,0:27:33.10:0,33,1048	0/0:41,0:40:69.19:0,69,2117	0/0:21,0:21:39.06:0,39,1179	1/1:18,3:20:7.73:302,8,0	0/0:14,0:16:14.86:0,15,421	1/1:2,1:2:3.01:76,3,0
chr10	104023872	.	T	TGGAA	1693.19	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=-7.585;DP=677;FS=0.752;HRun=0;HaplotypeScore=147.4980;InbreedingCoeff=0.8498;MQ=72.93;MQ0=1;MQRankSum=1.785;QD=15.82;ReadPosRankSum=-0.977;VQSLOD=2.9683;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,23:42:28.20:1101,28,0	0/0:8,0:8:6.02:0,6,92	./.	./.	0/0:21,0:21:18.02:0,18,168	0/0:28,0:28:42.13:0,42,624	1/1:24,18:45:30.10:701,30,0	1/1:20,0:20:2.90:21,3,0	0/0:32,0:32:42.12:0,42,604	0/0:24,0:23:27.07:0,27,359	0/0:11,0:11:15.05:0,15,231	0/0:27,0:27:42.03:0,42,513	0/0:25,0:25:42.12:0,42,604	0/0:18,0:18:33.11:0,33,508	0/0:25,0:25:27.03:0,27,251	0/0:14,0:14:21.06:0,21,300	0/0:48,0:48:66.11:0,66,897	0/0:28,0:28:45.07:0,45,704	0/0:21,0:21:24:0,24,300	0/0:31,0:31:39.13:0,39,600	0/0:19,0:19:39.12:0,39,578	0/0:22,0:22:12.01:0,12,112	0/0:11,0:11:15.02:0,15,206	0/0:42,0:42:57.18:0,57,853	0/0:24,0:24:45.11:0,45,646	0/0:20,0:20:12.01:0,12,112	0/0:22,0:22:33.06:0,33,423	0/0:8,0:9:12.01:0,12,112
chr10	104023903	.	AAGGAAGGAAGGAAGGT	A	5010.58	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.260;DP=718;FS=15.266;HRun=0;HaplotypeScore=318.1457;InbreedingCoeff=0.9899;MQ=60.77;MQ0=6;MQRankSum=-2.023;QD=49.61;ReadPosRankSum=0.354;VQSLOD=3.1032;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,129,6308	0/0:6,0:6:18.01:0,18,730	0/0:12,0:9:23.81:0,24,231	0/0:16,0:12:30.02:0,30,396	1/1:3,26:29:59.58:1332,60,0	0/0:29,0:29:87.23:0,87,4863	0/0:45,0:45:96.22:0,96,4449	0/0:30,0:30:78.18:0,78,1861	0/0:24,0:24:69.14:0,69,4145	0/0:28,0:27:78.14:0,78,3528	0/0:16,0:16:48.08:0,48,1896	0/0:24,0:24:72.19:0,72,3964	0/0:21,0:21:60.19:0,60,4075	0/0:34,0:34:99:0,102,4610	1/1:2,19:21:27.09:1261,27,0	0/0:17,0:17:51.13:0,51,2438	0/0:46,0:46:99:0,129,6732	0/0:33,0:33:87.22:0,87,4752	0/0:32,0:26:71.55:0,72,2141	0/0:25,0:25:72.14:0,72,3368	0/0:24,0:24:72.13:0,72,2821	1/1:4,15:19:32.77:904,33,0	0/0:14,0:13:35.86:0,36,1581	0/0:35,0:35:99:0,100,5642	0/0:29,0:28:78.18:0,78,4197	1/1:2,19:21:49.43:973,49,0	0/0:26,0:26:75.07:0,75,3196	1/1:2,9:11:12.03:540,12,0
chr10	104025847	.	TAC	T	821.81	PASS	AB=0.916;AC=23;AF=0.442;AN=52;BaseQRankSum=6.904;DP=579;FS=2.050;HRun=0;HaplotypeScore=88.7339;InbreedingCoeff=0.1147;MQ=59.07;MQ0=4;MQRankSum=0.235;QD=2.11;ReadPosRankSum=1.455;VQSLOD=1.8552;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,1:37:26.15:26,0,379	0/0:6,0:6:3.01:0,3,45	./.	./.	0/1:7,3:10:30.23:91,0,30	0/0:21,0:21:30.04:0,30,363	0/1:34,2:38:48.40:48,0,426	0/0:12,0:14:0.80:0,1,3	0/1:26,2:28:5.19:5,0,246	0/0:18,0:17:14.15:0,14,133	0/0:13,0:12:15.04:0,15,203	0/1:18,4:23:43.65:44,0,164	0/1:13,2:17:41.07:41,0,225	0/1:22,1:23:36.16:36,0,219	1/1:16,8:25:27.37:276,27,0	0/0:30,0:29:36.07:0,36,473	0/0:24,1:25:9.48:0,9,506	0/1:23,3:28:69.26:69,0,337	1/1:8,0:13:10.29:47,10,0	1/1:4,0:11:2.80:13,3,0	0/1:37,0:36:0:0,0,0	1/1:5,2:8:3.01:33,3,0	0/0:12,2:12:9:0,9,93	0/1:48,2:49:2.11:2,0,699	0/0:13,0:12:12.01:0,12,139	0/1:21,0:22:0.30:179,0,0	1/1:7,0:11:5.68:28,6,0	1/1:3,0:7:8.52:42,9,0
chr10	104027352	.	AGCAG	A	11499.54	PASS	AB=0.511;AC=19;AF=0.339;AN=56;BaseQRankSum=14.968;DP=792;FS=0.000;HRun=0;HaplotypeScore=139.1417;InbreedingCoeff=0.9181;MQ=74.08;MQ0=0;MQRankSum=-7.921;QD=44.23;ReadPosRankSum=3.969;VQSLOD=4.8953;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,3448	0/0:13,0:13:33.11:0,33,895	0/0:40,0:39:99:0,109,2692	0/0:33,0:34:90.91:0,91,2095	1/1:0,25:25:45.15:898,45,0	0/0:22,0:22:60.19:0,60,1600	0/0:30,0:30:87.30:0,87,2397	1/1:2,30:31:87.13:1535,87,0	0/0:41,0:41:99:0,123,3213	0/0:29,0:29:78.27:0,78,2071	0/0:15,0:15:39.12:0,39,1016	0/0:27,0:27:81.24:0,81,2087	0/0:28,0:28:84.17:0,84,2135	0/0:21,0:21:60.19:0,60,1585	1/1:1,45:46:99:2214,111,0	0/0:24,0:24:72.18:0,72,1879	0/0:49,0:49:99:0,132,3468	0/0:29,0:29:84.27:0,84,2238	1/1:2,27:29:78.25:1493,78,0	1/1:1,12:13:30.10:597,30,0	1/1:0,39:39:66.23:1273,66,0	1/1:0,24:24:53.97:1044,54,0	0/0:22,0:22:66.23:0,66,1718	0/0:37,0:37:99:0,105,2854	0/0:28,0:28:78.21:0,78,2023	0/1:1,23:24:14.74:1248,0,15	1/1:1,18:19:48.16:958,48,0	1/1:0,9:9:12.04:239,12,0
chr10	104028931	.	CGAGGGGGGAGACTCAGAGAGGT	C	1142.69	PASS	AB=0.786;AC=9;AF=0.161;AN=56;BaseQRankSum=6.042;DP=527;FS=0.806;HRun=0;HaplotypeScore=286.6616;InbreedingCoeff=0.5589;MQ=78.66;MQ0=2;MQRankSum=-2.379;QD=11.90;ReadPosRankSum=0.960;VQSLOD=2.2878;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:90.26:0,90,3120	0/0:13,0:13:18.06:0,18,491	0/0:22,0:20:2.78:0,3,32	0/0:30,0:25:21:0,21,367	1/1:6,10:15:11.78:73,12,0	0/0:15,0:15:30.10:0,30,1360	0/0:25,0:25:45.15:0,45,1708	0/0:12,0:12:8.51:0,9,113	0/0:16,0:16:25.33:0,25,786	0/0:10,0:10:18.02:0,18,356	0/0:14,0:14:9.03:0,9,209	0/0:11,0:11:21.07:0,21,769	0/0:13,0:13:33.09:0,33,1050	0/0:15,0:15:33.11:0,33,1210	1/1:19,0:18:30.05:766,30,0	0/0:21,0:21:48.16:0,48,2157	0/0:33,0:33:78.25:0,78,3716	0/1:23,0:23:63.48:63,0,1136	0/0:11,0:11:15.05:0,15,464	0/0:21,0:21:23.82:0,24,456	0/0:35,0:34:69.24:0,69,2462	0/1:8,8:16:0:0,0,0	0/0:15,0:15:30.09:0,30,821	0/0:21,0:21:42.09:0,42,1724	0/0:13,0:13:24.07:0,24,760	0/1:10,8:15:31.94:297,0,32	0/0:23,0:23:39.13:0,39,2034	1/1:4,0:4:3.01:84,3,0
chr10	104033388	.	CA	C	265.58	PASS	AB=0.854;AC=4;AF=0.67;AN=6;BaseQRankSum=-2.083;DP=47;FS=0.000;HRun=3;HaplotypeScore=85.7714;MQ=209.04;MQ0=10;MQRankSum=1.003;QD=7.38;ReadPosRankSum=-0.746;VQSLOD=0.2723;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:15,3:18:52.32:159,0,52	0/1:14,3:16:31.35:147,0,31	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,1:1:3:28,3,0	./.	./.	./.
chr10	104038389	.	AT	A	4302.75	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.539;DP=756;FS=2.244;HRun=1;HaplotypeScore=69.7357;InbreedingCoeff=0.9999;MQ=92.45;MQ0=0;MQRankSum=-2.689;QD=38.42;ReadPosRankSum=1.767;VQSLOD=5.5994;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,184,2885	0/0:10,0:10:30.10:0,30,477	0/0:33,0:33:95.89:0,96,1385	0/0:30,0:30:84.20:0,84,1275	1/1:0,21:21:57.12:773,57,0	0/0:25,0:25:72.23:0,72,1128	0/0:33,0:33:99:0,99,1487	0/0:42,0:42:99:0,126,1951	0/0:22,0:22:66.19:0,66,1006	0/0:26,0:26:78.27:0,78,1246	0/0:23,0:23:66.23:0,66,1054	0/0:38,0:38:99:0,114,1796	0/0:29,0:29:87.27:0,87,1344	0/0:17,0:17:51.16:0,51,790	1/1:0,23:23:63.21:881,63,0	0/0:31,0:31:93.29:0,93,1439	0/0:28,0:28:84.26:0,84,1296	0/0:15,0:15:42.14:0,42,671	0/0:22,0:22:66.21:0,66,1012	0/0:25,0:25:72.23:0,72,1121	0/0:38,0:38:99:0,114,1747	1/1:0,20:20:54.18:754,54,0	0/0:18,0:18:54.14:0,54,812	0/0:27,0:27:81.22:0,81,1220	0/0:18,0:18:54.17:0,54,838	1/1:0,29:29:81.24:1098,81,0	0/0:33,0:33:99:0,99,1577	1/1:0,19:19:57.19:797,57,0
chr10	104039215	.	A	ATT	3476.60	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=0.845;DP=587;FS=0.369;HRun=10;HaplotypeScore=73.1163;InbreedingCoeff=0.9949;MQ=71.41;MQ0=0;MQRankSum=-1.188;QD=18.59;ReadPosRankSum=-2.591;VQSLOD=1.9746;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:50:99:0,144,1438	0/0:11,0:11:24.04:0,24,244	0/0:11,0:11:20.95:0,21,200	0/0:8,0:8:15:0,15,148	1/1:2,0:23:38.73:172,39,0	0/0:19,0:19:51.07:0,51,519	0/0:20,0:20:60.12:0,60,603	1/1:10,13:23:39.13:572,39,0	0/0:19,0:19:35.97:0,36,352	0/0:32,0:32:81.16:0,81,820	0/0:12,0:12:33.07:0,33,336	0/0:16,0:16:39.02:0,39,382	0/0:17,0:17:39.05:0,39,396	0/0:22,0:22:60.11:0,60,604	1/1:3,0:15:25.84:90,26,0	0/0:17,0:17:42.05:0,42,421	0/0:27,0:27:75.10:0,75,741	0/0:37,0:37:99:0,99,981	1/1:4,16:22:50.62:684,51,0	1/1:2,10:12:33.11:483,33,0	1/1:4,20:24:39.13:582,39,0	1/1:1,0:19:39.80:140,40,0	0/0:20,0:20:51.07:0,51,511	0/0:33,0:34:83.84:0,84,820	0/0:28,0:28:77.52:0,78,763	1/1:5,1:21:40.94:193,41,0	1/1:3,14:19:35.40:500,35,0	1/1:2,0:9:17.47:61,17,0
chr10	104041601	.	GT	G	2773.32	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.153;DP=632;FS=8.588;HRun=8;HaplotypeScore=66.0782;InbreedingCoeff=0.9439;MQ=78.35;MQ0=0;MQRankSum=-0.337;QD=22.01;ReadPosRankSum=-1.189;VQSLOD=3.3322;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,129,1544	0/0:10,0:10:30.05:0,30,346	0/0:14,0:15:0.51:0,1,301	0/0:19,0:19:33.79:0,34,356	0/0:17,0:17:45.58:0,46,515	0/0:34,0:34:93.26:0,93,1100	0/0:23,0:23:66.19:0,66,785	1/1:5,21:26:62.97:575,63,0	0/0:33,0:33:99:0,99,1159	0/0:15,0:15:42.12:0,42,498	0/0:15,0:15:45.14:0,45,543	0/0:25,0:25:72.22:0,72,870	0/0:25,0:25:72.17:0,72,831	0/0:22,0:22:66.18:0,66,779	0/0:18,0:18:51.16:0,51,615	0/0:25,0:25:72.21:0,72,860	0/0:29,0:30:78.08:0,78,906	0/0:23,0:23:62.09:0,62,780	1/1:2,17:19:51.03:471,51,0	1/1:3,17:20:51.03:483,51,0	1/1:5,33:38:87.13:839,87,0	0/0:12,0:12:24.07:0,24,290	0/0:16,0:16:48.10:0,48,534	0/0:21,0:21:60.18:0,60,725	0/0:17,0:17:51.16:0,51,616	0/0:26,0:26:78.23:0,78,929	1/1:2,21:23:60.10:579,60,0	0/0:18,1:19:28.24:0,28,623
chr10	104041888	.	GCACACA	G	135.66	PASS	AB=0.956;AC=9;AF=0.180;AN=50;BaseQRankSum=4.770;DP=535;FS=0.000;HRun=0;HaplotypeScore=114.9510;InbreedingCoeff=0.3267;MQ=55.05;MQ0=12;MQRankSum=-0.989;QD=1.04;ReadPosRankSum=0.479;VQSLOD=2.0327;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:24.06:0,24,685	0/0:5,0:4:6:0,6,66	./.	./.	0/0:9,0:9:12.02:0,12,293	0/1:12,0:12:32.51:33,0,486	0/0:21,0:22:45.15:0,45,1156	0/0:8,0:8:0.89:0,1,2	0/0:26,0:24:42.03:0,42,874	0/0:16,0:15:24.97:0,25,544	0/0:5,0:6:6.02:0,6,133	0/0:33,0:34:29.29:0,29,1097	0/1:22,1:25:17.23:17,0,1024	0/0:15,0:19:30.10:0,30,817	0/0:15,0:22:27.08:0,27,653	0/0:20,0:21:38.33:0,38,1101	0/0:36,0:41:65.43:0,65,1890	0/0:20,0:22:7.32:0,7,582	1/1:13,1:14:2.99:62,3,0	./.	1/1:36,16:51:0.61:1,1,0	0/0:10,0:10:18.06:0,18,493	0/1:10,0:10:21.81:22,0,467	0/0:41,0:42:53.30:0,53,1651	0/0:14,0:14:24.07:0,24,576	0/0:19,0:19:24.08:0,24,603	1/1:10,6:16:4.70:121,5,0	0/0:11,0:18:8.20:0,8,252
chr10	104042928	.	A	AC	39.14	PASS	AB=0.807;AC=3;AF=0.056;AN=54;BaseQRankSum=5.791;DP=484;FS=22.318;HRun=0;HaplotypeScore=64.7679;InbreedingCoeff=-0.0641;MQ=67.08;MQ0=4;MQRankSum=-0.416;QD=0.77;ReadPosRankSum=-0.595;VQSLOD=0.0534;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:30.10:0,30,420	0/0:8,0:8:24.08:0,24,336	0/0:13,0:9:8.63:0,9,87	0/0:16,0:10:3.59:0,4,15	0/0:17,0:17:51.17:0,51,711	0/0:14,0:14:33.11:0,33,461	0/0:6,0:6:15.05:0,15,210	0/0:42,0:38:99:0,114,1546	0/0:14,0:14:42.14:0,42,587	0/0:30,0:30:90.29:0,90,1244	0/0:15,0:15:45.15:0,45,629	0/0:17,0:17:51.17:0,51,713	0/0:20,0:20:57.19:0,57,797	0/0:12,0:12:33.10:0,33,444	0/0:10,0:10:30.10:0,30,419	0/0:14,0:14:42.14:0,42,586	0/0:10,0:10:12.04:0,12,168	0/0:30,1:31:59.24:0,59,1091	0/0:8,0:6:3:0,3,194	0/1:9,4:13:75.68:76,0,222	0/1:6,3:9:6.32:6,0,184	./.	0/0:4,0:4:12.04:0,12,168	0/0:4,0:4:9.03:0,9,126	0/0:24,0:24:69.23:0,69,963	0/0:40,0:40:99:0,120,1662	0/1:26,3:29:50.26:50,0,825	0/0:47,0:47:99:0,132,1845
chr10	104043313	.	CTACTATA	C	3496.34	PASS	AB=0.825;AC=10;AF=0.179;AN=56;BaseQRankSum=10.448;DP=458;FS=0.516;HRun=0;HaplotypeScore=126.3696;InbreedingCoeff=0.4729;MQ=66.01;MQ0=0;MQRankSum=-3.072;QD=21.72;ReadPosRankSum=-5.021;VQSLOD=1.7786;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:48.16:0,48,1561	0/0:5,0:5:15.05:0,15,499	0/0:4,0:4:2.79:0,3,28	0/0:13,0:10:3.01:0,3,50	0/0:20,0:20:15.03:0,15,230	0/0:30,0:30:66.23:0,66,2218	0/0:5,0:5:12.04:0,12,322	1/1:23,25:48:75.22:1429,75,0	0/0:14,0:14:36.11:0,36,1163	0/0:20,0:20:42.14:0,42,1386	0/0:28,0:28:60.19:0,60,2011	0/0:7,0:7:21.07:0,21,614	0/0:11,0:11:15.05:0,15,437	0/0:17,0:17:33.11:0,33,1087	0/0:11,0:11:12.04:0,12,205	0/0:17,0:17:36.12:0,36,1188	0/0:15,0:15:26.97:0,27,789	0/0:28,0:28:60.15:0,60,1541	0/1:4,3:7:37.30:198,0,37	1/1:8,20:28:27.02:553,27,0	0/1:5,10:15:0.13:0,0,0	0/0:7,0:7:6.02:0,6,102	0/0:7,0:7:18.06:0,18,489	0/0:1,0:1:3.01:0,3,112	0/0:16,0:16:42.14:0,42,1542	0/1:32,0:32:99:697,0,205	1/1:7,11:18:21.07:445,21,0	0/1:13,0:13:99:174,0,186
chr10	104043335	.	TACTATATACA	T	2452.30	PASS	AB=0.615;AC=5;AF=0.096;AN=52;BaseQRankSum=6.966;DP=470;FS=4.394;HRun=0;HaplotypeScore=155.1439;InbreedingCoeff=0.8035;MQ=64.30;MQ0=0;MQRankSum=-7.436;QD=42.28;ReadPosRankSum=3.349;VQSLOD=3.2522;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.03:0,66,2292	0/0:7,0:7:18.06:0,18,694	0/0:13,0:10:15.05:0,15,311	0/0:13,0:11:8.06:0,8,321	0/1:6,10:16:0.01:0,0,0	0/0:27,0:27:69.24:0,69,3027	0/0:8,0:8:18.06:0,18,623	0/0:43,0:43:23.86:0,24,1110	0/0:15,0:15:39.13:0,39,1580	0/0:24,0:24:55.43:0,55,2250	0/0:24,0:24:63.13:0,63,2557	0/0:9,0:9:21.07:0,21,876	0/0:8,0:8:21.07:0,21,754	0/0:17,0:17:42.14:0,42,1801	./.	0/0:13,0:13:33.10:0,33,1477	0/0:10,0:10:18.06:0,18,867	0/0:27,0:27:39.13:0,39,1641	0/0:10,0:10:13.95:0,14,343	0/0:29,0:29:40.76:0,41,581	0/0:16,0:16:8.51:0,9,145	./.	0/0:10,0:10:21.07:0,21,732	0/0:2,0:2:6.02:0,6,221	0/0:19,0:19:57.20:0,57,2436	1/1:5,27:32:78.25:2071,78,0	0/0:17,0:17:17.87:0,18,328	1/1:4,6:10:18.06:499,18,0
chr10	104044495	.	GTTC	G	5481.05	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.269;DP=697;FS=8.293;HRun=0;HaplotypeScore=103.8494;InbreedingCoeff=0.9987;MQ=86.08;MQ0=0;MQRankSum=-4.128;QD=40.90;ReadPosRankSum=-0.283;VQSLOD=5.6900;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,2873	0/0:11,0:11:27.09:0,27,578	0/0:22,0:22:54.19:0,54,1100	0/0:27,0:27:57.20:0,57,1172	0/0:27,0:27:72.25:0,72,1588	0/0:24,0:24:60.21:0,60,1305	0/0:35,0:35:99:0,99,2133	1/1:0,21:21:60.18:938,60,0	0/0:26,0:26:78.27:0,78,1722	0/0:24,0:24:66.23:0,66,1414	0/0:13,0:13:36.12:0,36,794	0/0:29,0:29:87.30:0,87,1909	0/0:32,0:32:93.30:0,93,2005	0/0:29,0:29:87.28:0,87,1877	0/0:41,0:41:99:0,120,2648	0/0:20,0:20:54.17:0,54,1151	0/0:16,0:16:48.16:0,48,1059	0/0:9,0:9:21.07:0,21,464	1/1:2,18:20:54.16:837,54,0	1/1:2,16:18:48.16:770,48,0	1/1:1,43:44:99:1588,99,0	0/0:20,0:20:57.18:0,57,1216	0/0:21,0:21:57.20:0,57,1258	0/0:33,0:33:87.25:0,87,1774	0/0:17,0:17:45.15:0,45,992	0/0:29,0:29:69.24:0,69,1500	1/1:1,30:31:84.29:1349,84,0	0/0:12,0:12:30.10:0,30,606
chr10	104044796	.	G	GA	1415.24	PASS	AB=0.953;AC=17;AF=0.304;AN=56;BaseQRankSum=-4.977;DP=601;FS=4.372;HRun=12;HaplotypeScore=71.3574;InbreedingCoeff=0.5339;MQ=61.66;MQ0=7;MQRankSum=1.231;QD=6.32;ReadPosRankSum=-5.138;VQSLOD=1.1225;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:39,1:43:54.06:0,54,531	1/1:5,6:13:10.82:225,11,0	0/1:17,0:10:5.01:5,0,103	0/0:12,0:8:13.02:0,13,77	0/0:8,0:28:28.35:0,28,82	0/1:18,1:22:14.54:15,0,194	0/0:25,1:26:50.65:0,51,372	1/1:12,16:26:12.15:286,12,0	0/1:10,0:11:4.85:5,0,95	0/1:25,3:30:22.29:22,0,301	0/0:19,0:18:42.75:0,43,296	0/1:15,2:17:16.02:16,0,163	0/0:18,0:21:43.21:0,43,271	0/0:12,0:12:20.87:0,21,153	0/0:1,0:13:18.33:0,18,53	0/0:13,1:15:5.66:0,6,192	0/0:41,0:41:63.74:0,64,608	0/0:21,0:22:40.78:0,41,288	1/1:9,8:17:0.99:218,1,0	1/1:3,12:15:26.84:235,27,0	1/1:7,15:23:26.72:233,27,0	0/0:5,0:12:15.81:0,16,45	0/0:20,0:22:41.45:0,41,290	0/0:28,0:29:66.27:0,66,469	0/0:25,1:27:32.45:0,32,392	0/0:7,0:22:27.41:0,27,78	1/1:11,17:29:24.54:338,25,0	0/0:2,0:10:17.18:0,17,49
chr10	104045782	.	C	CCT	64.88	PASS	AC=4;AF=0.080;AN=50;BaseQRankSum=3.419;DP=620;FS=9.025;HRun=0;HaplotypeScore=84.2782;InbreedingCoeff=0.8800;MQ=66.11;MQ0=0;MQRankSum=-3.413;QD=8.11;ReadPosRankSum=-0.477;VQSLOD=2.4874;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,187,2880	0/0:15,0:15:45.15:0,45,734	0/0:20,0:16:48.03:0,48,691	0/0:22,0:20:51.03:0,51,725	0/0:21,0:21:60.19:0,60,954	0/0:16,0:16:45.15:0,45,732	0/0:34,0:33:99:0,99,1579	./.	0/0:21,0:21:63.22:0,63,1028	0/0:23,0:23:69.23:0,69,1098	0/0:16,0:16:48.14:0,48,727	0/0:27,0:27:72.22:0,72,1125	0/0:22,0:22:66.23:0,66,1074	0/0:29,0:29:81.28:0,81,1322	0/0:38,0:38:99:0,111,1783	0/0:10,0:10:30.10:0,30,488	0/0:46,0:46:99:0,138,2210	0/0:44,0:44:99:0,126,2028	./.	1/1:0,4:2:6.02:82,6,0	./.	0/0:27,0:27:78.27:0,78,1272	0/0:20,0:20:60.20:0,60,979	0/0:37,0:37:99:0,105,1702	0/0:20,0:20:60.20:0,60,979	0/0:25,0:25:75.26:0,75,1218	1/1:0,4:4:6.02:82,6,0	0/0:16,0:16:48.16:0,48,783
chr10	104045812	.	AGCTG	A	804.41	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=6.763;DP=641;FS=4.925;HRun=0;HaplotypeScore=109.0109;InbreedingCoeff=0.9505;MQ=66.89;MQ0=0;MQRankSum=-6.933;QD=32.18;ReadPosRankSum=-1.155;VQSLOD=3.3107;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,163,4099	0/0:14,0:14:37.37:0,37,898	0/0:23,0:20:57.20:0,57,1468	0/0:33,0:29:81.24:0,81,1945	0/0:23,0:23:57.18:0,57,1449	0/0:19,0:19:51.18:0,51,1353	0/0:24,0:24:63.22:0,63,1674	1/1:0,7:7:21.07:392,21,0	0/0:16,0:16:48.16:0,48,1280	0/0:25,0:25:69.24:0,69,1841	0/0:22,0:22:63.20:0,63,1620	0/0:26,0:26:69.23:0,69,1705	0/0:21,0:21:60.20:0,60,1537	0/0:31,0:31:93.28:0,93,2384	0/0:36,0:36:99:0,99,2635	0/0:14,0:14:42.14:0,42,1104	0/0:40,0:40:99:0,111,2928	0/0:40,1:40:99:0,120,3201	1/1:1,4:4:12.04:224,12,0	1/1:2,5:3:6.02:112,6,0	./.	0/0:23,0:23:57.20:0,57,1507	0/0:22,0:22:63.22:0,63,1672	0/0:36,0:36:99:0,102,2707	0/0:23,0:22:63.22:0,63,1667	0/0:27,0:27:75.26:0,75,1969	1/1:1,5:4:12.04:223,12,0	0/0:21,0:21:51.16:0,51,1242
chr10	104045879	.	ACC	A	1108	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.397;DP=632;FS=4.329;HRun=3;HaplotypeScore=87.2663;InbreedingCoeff=0.9883;MQ=60.36;MQ0=0;MQRankSum=-11.257;QD=15.39;ReadPosRankSum=-0.280;VQSLOD=0.5215;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,150,2722	0/0:12,0:12:36.12:0,36,655	0/0:19,0:14:42.14:0,42,787	0/0:15,0:12:36.12:0,36,659	0/0:30,0:30:90.31:0,90,1737	0/0:27,0:27:75.26:0,75,1446	0/0:24,0:23:69.24:0,69,1333	1/1:5,10:11:23.59:202,24,0	0/0:17,0:17:51.17:0,51,985	0/0:23,0:22:66.23:0,66,1269	0/0:27,0:27:75.25:0,75,1416	0/0:33,0:33:93.28:0,93,1743	0/0:24,0:24:72.25:0,72,1391	0/0:29,0:29:81.28:0,81,1564	0/0:23,0:23:66.21:0,66,1239	0/0:19,0:19:57.20:0,57,1101	0/0:20,0:20:57.20:0,57,1101	0/0:32,0:31:90.27:0,90,1700	1/1:3,6:8:15.03:149,15,0	1/1:1,23:22:59.92:515,60,0	1/1:3,6:9:11.97:100,12,0	0/0:15,0:15:42.10:0,42,773	0/0:26,0:26:75.26:0,75,1447	0/0:29,0:29:84.24:0,84,1585	0/0:23,0:23:69.24:0,69,1333	0/0:28,0:28:84.29:0,84,1623	1/1:2,13:13:35.97:315,36,0	0/0:15,0:15:42.14:0,42,811
chr10	104045883	.	TGACC	T	1856.34	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.357;DP=625;FS=3.448;HRun=0;HaplotypeScore=108.1350;InbreedingCoeff=0.9801;MQ=63.10;MQ0=0;MQRankSum=-11.094;QD=29.94;ReadPosRankSum=0.317;VQSLOD=3.4725;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,3910	0/0:11,0:11:33.11:0,33,956	0/0:22,0:17:51.17:0,51,1317	0/0:15,0:12:36.12:0,36,929	0/0:30,0:30:90.31:0,90,2576	0/0:28,0:28:78.27:0,78,2256	0/0:24,0:23:69.24:0,69,1996	1/1:1,10:7:21:291,21,0	0/0:17,0:17:51.18:0,51,1473	0/0:22,0:22:66.22:0,66,1843	0/0:28,0:28:81.28:0,81,2302	0/0:30,0:30:87.30:0,87,2501	0/0:25,0:25:75.24:0,75,2110	0/0:29,0:29:81.28:0,81,2322	0/0:27,0:27:81.23:0,81,2259	0/0:20,0:20:60.21:0,60,1721	0/0:22,0:22:66.23:0,66,1873	0/0:30,0:29:87.25:0,87,2383	1/1:1,6:6:15.05:234,15,0	1/1:0,23:21:57.66:815,58,0	1/1:0,6:6:8.57:129,9,0	0/0:15,0:15:39.13:0,39,1115	0/0:24,0:24:72.23:0,72,1997	0/0:28,0:28:81.23:0,81,2231	0/0:24,0:24:72.25:0,72,2074	0/0:30,0:30:90.31:0,90,2601	1/1:2,13:14:42.09:558,42,0	0/0:16,0:16:45.12:0,45,1220
chr10	104046137	.	G	GTTTTT	3193.42	PASS	AB=0.583;AC=9;AF=0.161;AN=56;BaseQRankSum=3.128;DP=532;FS=9.975;HRun=12;HaplotypeScore=107.7589;InbreedingCoeff=0.8401;MQ=70.18;MQ0=0;MQRankSum=-0.714;QD=27.77;ReadPosRankSum=-5.344;VQSLOD=0.2667;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:19:40.17:0,40,555	0/0:10,0:12:23.40:0,23,302	0/0:9,0:10:17.91:0,18,249	0/0:14,0:12:7.83:0,8,95	1/1:12,2:32:62.94:921,63,0	0/0:23,0:23:58.18:0,58,820	0/0:6,0:6:15.02:0,15,204	0/0:21,0:23:46.91:0,47,686	0/0:16,0:17:47.54:0,48,663	0/0:28,0:30:68.35:0,68,984	0/0:26,0:28:62.64:0,63,879	0/0:15,0:15:39:0,39,577	0/0:16,0:16:37.46:0,37,544	0/0:11,0:11:26.97:0,27,399	1/1:5,1:20:38.49:648,38,0	0/0:16,0:16:35.96:0,36,542	0/0:14,0:17:51.16:0,51,702	0/0:19,0:19:25.79:0,26,655	0/0:27,0:30:61.82:0,62,810	0/0:14,0:16:38.48:0,38,519	0/0:12,0:12:33.06:0,33,497	1/1:5,1:22:47.74:682,48,0	0/0:15,0:17:34.80:0,35,466	0/0:15,0:15:38.98:0,39,587	0/0:26,0:28:65.91:0,66,944	0/1:8,0:28:24.17:854,0,24	0/0:20,0:22:32.11:0,32,451	1/1:5,0:13:15.05:252,15,0
chr10	104047203	.	T	TA	1854.45	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-5.679;DP=497;FS=0.488;HRun=9;HaplotypeScore=68.8477;InbreedingCoeff=0.9452;MQ=73.31;MQ0=0;MQRankSum=-0.645;QD=22.62;ReadPosRankSum=-1.092;VQSLOD=3.9905;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:39:97.96:0,98,830	0/0:10,0:10:20.92:0,21,172	0/0:16,0:15:29.96:0,30,252	0/0:16,0:15:1.70:0,2,131	1/1:1,16:17:33.09:365,33,0	0/0:14,0:14:14.07:0,14,215	0/0:19,0:19:35.75:0,36,399	0/0:25,0:25:56.97:0,57,491	0/0:15,0:15:35.48:0,35,295	0/0:23,0:23:54.46:0,54,469	0/0:10,0:10:23.88:0,24,208	0/0:15,0:15:35.98:0,36,312	0/0:9,0:9:23.93:0,24,198	0/0:24,0:24:56.56:0,57,474	1/1:2,15:17:42.11:465,42,0	0/0:10,0:10:26.95:0,27,231	0/0:30,0:29:80.88:0,81,685	0/0:26,0:26:71.95:0,72,620	0/0:15,0:15:32.94:0,33,276	0/0:15,0:15:35.96:0,36,356	0/0:12,0:12:32.40:0,32,268	1/1:5,7:12:27.90:278,28,0	0/0:13,0:13:32.95:0,33,280	0/0:23,0:23:47.92:0,48,411	0/0:17,0:17:41.98:0,42,362	1/1:5,17:22:45.99:489,46,0	0/0:19,0:19:31.14:0,31,346	1/1:0,14:14:39.11:431,39,0
chr10	104048374	.	G	GC	1247.03	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=-1.644;DP=286;FS=4.862;HRun=0;HaplotypeScore=41.1112;InbreedingCoeff=0.7233;MQ=87.75;MQ0=2;MQRankSum=-0.299;QD=9.52;ReadPosRankSum=-1.232;VQSLOD=2.7141;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:3.41:3,0,157	0/0:5,0:5:11.76:0,12,84	0/0:20,0:15:4.14:0,4,251	0/0:16,0:14:20.40:0,20,143	1/1:9,0:9:14.21:93,14,0	0/1:8,0:8:4.99:5,0,84	0/0:23,0:22:40.43:0,40,253	1/1:12,1:13:26.78:218,27,0	0/0:6,0:6:14.89:0,15,109	0/0:2,0:2:5.89:0,6,37	0/0:3,0:3:8.85:0,9,59	0/0:9,0:9:2.24:0,2,96	0/0:11,0:11:21.65:0,22,107	0/0:4,0:4:2.71:0,3,16	1/1:14,0:14:29.38:171,29,0	0/0:6,0:6:11.58:0,12,86	0/0:19,0:19:34.26:0,34,244	0/0:14,0:14:31.93:0,32,231	1/1:6,7:15:3.69:113,4,0	1/1:8,0:8:12.18:96,12,0	1/1:11,0:11:26.88:210,27,0	1/1:12,0:12:25.95:166,26,0	0/0:6,0:6:12.15:0,12,54	0/0:4,0:4:8.91:0,9,65	0/0:5,0:5:7.74:0,8,63	1/1:10,0:10:20.18:134,20,0	1/1:4,0:4:11.89:96,12,0	1/1:6,0:6:17.95:143,18,0
chr10	104050387	.	TAC	T	1777.74	PASS	AB=0.922;AC=22;AF=0.393;AN=56;BaseQRankSum=7.523;DP=731;FS=0.442;HRun=0;HaplotypeScore=93.6090;InbreedingCoeff=0.1490;MQ=62.53;MQ0=13;MQRankSum=-0.077;QD=4.16;ReadPosRankSum=1.489;VQSLOD=2.3469;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:48,4:51:38.19:38,0,1042	0/0:4,0:4:12.04:0,12,185	0/0:44,0:16:12.02:0,12,153	0/1:39,0:15:6.16:6,0,28	1/1:10,14:25:23.90:254,24,0	0/0:19,1:20:16.86:0,17,704	0/1:23,2:25:23.50:23,0,553	0/1:24,2:26:7.25:7,0,320	0/1:13,2:16:52.70:53,0,273	0/0:29,2:31:19.82:0,20,679	0/0:21,0:22:1.84:0,2,561	0/1:14,1:15:1.21:1,0,430	0/0:18,0:18:39.13:0,39,601	0/1:22,1:23:7.76:8,0,321	1/1:8,17:26:44.80:492,45,0	0/1:23,2:25:11.45:11,0,700	0/1:32,2:34:2.57:3,0,808	0/1:22,2:24:17.48:17,0,644	0/1:11,3:14:64.07:64,0,102	0/0:22,0:22:33.21:0,33,657	0/0:62,2:63:19.69:0,20,1258	1/1:7,12:21:32.93:357,33,0	0/0:15,0:16:14.22:0,14,475	0/0:39,1:40:49.69:0,50,1083	0/0:22,0:22:42.11:0,42,621	1/1:11,10:22:35.77:371,36,0	0/1:25,2:27:17.55:18,0,573	1/1:3,7:12:23.73:234,24,0
chr10	104051425	.	ATG	A	1405.75	PASS	AB=0.905;AC=28;AF=0.560;AN=50;BaseQRankSum=11.694;DP=694;FS=2.567;HRun=0;HaplotypeScore=113.0933;InbreedingCoeff=-0.0108;MQ=64.60;MQ0=7;MQRankSum=0.162;QD=2.72;ReadPosRankSum=0.172;VQSLOD=2.4957;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,2:42:22.16:0,22,853	0/0:9,0:9:8.37:0,8,77	./.	./.	1/1:17,0:17:11.89:83,12,0	0/1:22,2:24:22.98:23,0,494	0/1:24,0:23:12.65:13,0,445	0/1:23,0:28:11.04:19,0,11	0/1:25,5:30:26.96:27,0,850	0/1:29,5:33:35.85:36,0,633	0/1:11,0:12:9.73:10,0,209	0/1:32,5:38:4.10:4,0,829	0/1:22,3:25:42.02:42,0,594	0/1:30,1:31:45.14:45,0,834	1/1:23,1:24:32.73:230,33,0	0/1:20,0:20:16.47:16,0,343	0/1:39,4:43:55.04:55,0,840	0/0:20,0:20:45.07:0,45,600	1/1:9,0:14:0.86:21,1,0	1/1:9,0:18:11.32:54,11,0	./.	1/1:24,2:26:41.75:318,42,0	0/0:14,0:14:20.96:0,21,256	0/1:38,5:43:9.06:9,0,1009	0/0:16,4:19:2:0,2,367	1/1:31,0:31:58.70:379,59,0	1/1:5,0:11:12.89:68,13,0	1/1:19,0:19:17.75:119,18,0
chr10	104051454	.	TGTGC	T	3224.03	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=8.812;DP=729;FS=0.819;HRun=0;HaplotypeScore=144.7837;InbreedingCoeff=0.5749;MQ=56.86;MQ0=17;MQRankSum=0.444;QD=18.32;ReadPosRankSum=0.789;VQSLOD=3.0625;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,107,1866	0/0:11,0:11:20.99:0,21,270	0/0:17,0:6:0.35:0,0,35	0/0:32,0:5:1.83:0,2,25	1/1:1,9:10:12.04:237,12,0	0/0:24,0:24:65.77:0,66,1133	0/0:28,0:27:13.71:0,14,913	0/0:22,0:20:29.29:0,29,258	0/0:37,0:37:83.75:0,84,1839	0/0:37,0:36:68.63:0,69,1624	0/1:13,0:12:1.16:1,0,443	0/0:40,0:40:73.52:0,74,1768	0/0:29,0:29:58.99:0,59,1322	0/0:37,0:37:85.99:0,86,1788	1/1:1,23:25:33.05:651,33,0	0/0:19,0:19:3.37:0,3,633	0/0:42,0:42:89.76:0,90,1806	0/0:22,0:22:37.81:0,38,1200	0/1:13,0:11:31.24:31,0,80	0/1:16,0:16:5.31:33,0,5	0/0:29,0:29:20.85:0,21,161	1/1:17,8:25:54.02:772,54,0	0/0:14,0:14:27.01:0,27,511	0/0:48,0:48:99:0,127,2264	0/0:23,0:22:53.84:0,54,804	1/1:5,35:40:99:1300,108,0	0/1:11,0:11:31.21:31,0,58	1/1:4,19:23:18.06:345,18,0
chr10	104052123	.	C	CGT	4040.67	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=14.968;DP=682;FS=13.861;HRun=0;HaplotypeScore=122.0614;InbreedingCoeff=0.7606;MQ=81.52;MQ0=1;MQRankSum=-1.967;QD=18.37;ReadPosRankSum=1.884;VQSLOD=3.0569;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,114,1568	0/0:10,0:10:24.05:0,24,317	0/0:21,0:21:31.70:0,32,453	0/0:23,0:23:44.71:0,45,444	1/1:8,9:17:23.96:370,24,0	0/0:21,0:21:63.15:0,63,852	0/0:23,0:23:66.11:0,66,857	0/0:36,0:35:4.17:0,4,135	0/0:19,0:19:54.07:0,54,702	0/0:20,0:20:57.15:0,57,773	0/0:11,0:11:30.10:0,30,427	0/0:21,0:21:60.19:0,60,832	0/0:25,0:25:72.08:0,72,930	0/0:15,0:15:39.11:0,39,534	1/1:11,22:33:75.21:1182,75,0	0/0:18,0:18:51.14:0,51,707	0/0:25,0:25:69.14:0,69,901	0/0:29,0:29:75.11:0,75,1001	0/0:21,0:21:4.93:0,5,159	1/1:18,0:18:26.32:118,26,0	0/1:57,0:56:75.08:129,0,75	1/1:2,15:18:14.77:255,15,0	0/0:34,0:34:99:0,99,1358	0/0:26,0:26:75.23:0,75,1046	0/0:22,0:22:63.20:0,63,881	1/1:4,21:25:21.92:907,22,0	0/1:26,0:26:80.68:81,0,102	1/1:7,17:26:66.81:1000,67,0
chr10	104052128	.	G	GCA	9349.60	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-2.184;DP=683;FS=7.372;HRun=0;HaplotypeScore=100.0425;InbreedingCoeff=0.9938;MQ=81.57;MQ0=1;MQRankSum=-2.204;QD=34.76;ReadPosRankSum=1.749;VQSLOD=7.2540;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,102,1232	0/0:10,0:10:29.89:0,30,335	0/0:19,0:19:42.09:0,42,516	0/0:25,0:25:32.22:0,32,513	1/1:2,14:17:21.07:332,21,0	0/0:22,0:22:57.18:0,57,747	0/0:24,0:24:66.17:0,66,821	1/1:5,27:31:79.49:1280,79,0	0/0:20,0:20:51.10:0,51,634	0/0:20,0:20:57.17:0,57,723	0/0:11,0:11:30.10:0,30,393	0/0:20,0:20:54.16:0,54,693	0/0:24,0:24:63.20:0,63,826	0/0:17,0:17:48.11:0,48,608	1/1:5,26:32:66.22:1006,66,0	0/0:18,0:18:54.15:0,54,678	0/0:25,0:25:69.16:0,69,884	0/0:30,0:30:81.05:0,81,986	1/1:4,17:21:48.16:823,48,0	1/1:2,18:20:42.14:717,42,0	1/1:4,52:56:99:2134,128,0	1/1:6,9:15:17.09:237,17,0	0/0:35,0:35:99:0,105,1348	0/0:26,0:26:69.21:0,69,891	0/0:22,0:22:60.19:0,60,787	1/1:6,17:23:12.82:886,13,0	1/1:4,22:26:60.21:1028,60,0	1/1:10,16:26:57.19:908,57,0
chr10	104052228	.	A	AT	3190.26	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.934;DP=609;FS=16.272;HRun=7;HaplotypeScore=58.0308;InbreedingCoeff=0.9952;MQ=90.95;MQ0=0;MQRankSum=-3.192;QD=28.48;ReadPosRankSum=1.856;VQSLOD=2.6121;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,144,1383	0/0:10,0:10:30.05:0,30,289	0/0:27,0:27:63.06:0,63,601	0/0:22,0:22:56.83:0,57,540	1/1:2,21:23:63.15:745,63,0	0/0:17,0:17:48.08:0,48,464	0/0:14,0:14:42.05:0,42,399	0/0:33,0:33:81.10:0,81,774	0/0:16,0:16:42.07:0,42,405	0/0:27,0:27:78.12:0,78,753	0/0:17,0:17:45.07:0,45,434	0/0:14,0:14:42.07:0,42,406	0/0:18,0:18:48.08:0,48,463	0/0:10,0:10:30.05:0,30,290	1/1:2,20:22:51.16:616,51,0	0/0:16,0:16:39.04:0,39,370	0/0:22,0:22:63.10:0,63,608	0/0:19,0:19:48.07:0,48,464	0/0:28,0:28:69.10:0,69,666	0/0:20,0:20:57.08:0,57,545	0/0:28,0:28:72.11:0,72,695	1/1:2,19:21:54.17:652,54,0	0/0:30,0:30:75.10:0,75,718	0/0:20,0:20:54.08:0,54,521	0/0:19,0:19:54.08:0,54,522	1/1:4,21:25:14.18:709,14,0	0/0:16,0:16:45.02:0,45,424	1/1:4,17:21:54.16:643,54,0
chr10	104053264	.	CACAGAGAGAGAGAGAGAGAG	C	4487.03	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=8.514;DP=761;FS=10.936;HRun=0;HaplotypeScore=333.5210;InbreedingCoeff=0.6965;MQ=58.48;MQ0=23;MQRankSum=-4.863;QD=26.87;ReadPosRankSum=-0.332;VQSLOD=1.9888;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:67,0:67:99:0,117,4398	0/0:9,0:9:5.09:0,5,1321	0/0:52,0:21:50.35:0,50,546	0/0:36,0:17:41.77:0,42,423	1/1:5,0:5:6.49:102,6,0	0/0:28,0:28:78.18:0,78,5139	0/0:44,0:44:99:0,111,5044	1/1:11,12:23:58.78:613,59,0	0/0:34,0:34:65.33:0,65,4638	0/0:33,0:33:93.29:0,93,6316	0/0:14,0:14:39.08:0,39,2357	0/0:41,0:39:93.23:0,93,5892	0/0:32,0:32:60.01:0,60,2801	0/0:37,0:36:81.08:0,81,4965	0/1:15,0:15:54.92:124,0,55	0/0:30,0:30:87.20:0,87,5474	0/0:17,0:16:39.13:0,39,3070	0/0:25,0:25:75.20:0,75,4837	1/1:3,19:22:59.91:1436,60,0	1/1:1,21:24:21.07:1133,21,0	1/1:8,38:46:5.81:319,6,0	0/0:15,0:15:5.95:0,6,50	0/0:20,0:20:57.15:0,57,4196	0/0:36,0:35:69.09:0,69,3260	0/0:21,0:21:60.15:0,60,4276	0/1:12,0:12:99:105,0,118	1/1:0,18:18:11.74:655,12,0	0/0:3,0:3:3:0,3,25
chr10	104053266	.	C	CAG	1567.13	PASS	AB=0.750;AC=7;AF=0.146;AN=48;BaseQRankSum=-6.440;DP=763;FS=8.982;HRun=0;HaplotypeScore=154.3346;InbreedingCoeff=0.0940;MQ=58.35;MQ0=25;MQRankSum=2.051;QD=7.61;ReadPosRankSum=2.056;VQSLOD=2.4443;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:65:22.79:0,23,114	0/0:8,0:9:8.82:0,9,62	./.	./.	0/0:2,0:5:2.04:0,2,6	0/0:26,0:28:35.64:0,36,300	0/0:38,0:45:50.21:0,50,415	./.	1/1:26,8:34:19.21:429,19,0	0/0:32,0:32:2.21:0,2,198	0/0:15,0:15:26.81:0,27,217	0/1:25,17:40:99:350,0,133	0/1:16,16:34:50.02:157,0,50	0/1:20,16:37:51.06:279,0,51	0/0:12,0:15:8.99:0,9,43	0/0:27,0:30:44.58:0,45,417	0/0:13,0:16:26.72:0,27,248	0/0:25,0:26:44.63:0,45,389	0/0:22,0:21:17.04:0,17,84	0/0:24,0:24:19.89:0,20,98	0/0:44,0:42:5.68:0,6,28	0/0:13,0:15:1.28:0,1,4	0/1:18,0:20:44.03:192,0,44	0/1:19,18:37:29.20:287,0,29	0/0:21,0:21:8.06:0,8,249	0/0:7,0:10:8.99:0,9,43	0/0:18,0:18:8.52:0,9,42	./.
chr10	104053624	.	C	CT	2020.17	PASS	AB=0.524;AC=9;AF=0.161;AN=56;BaseQRankSum=10.657;DP=557;FS=39.520;HRun=0;HaplotypeScore=92.2271;InbreedingCoeff=0.8724;MQ=89.81;MQ0=0;MQRankSum=-6.946;QD=33.12;ReadPosRankSum=-0.711;VQSLOD=1.0643;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,1897	0/0:8,0:8:24.08:0,24,334	0/0:27,0:27:74.02:0,74,970	0/0:18,0:18:48.67:0,49,579	1/1:0,8:8:11.90:192,12,0	0/0:15,0:15:45.14:0,45,611	0/0:16,0:16:45.15:0,45,625	0/0:28,0:28:78.04:0,78,984	0/0:18,0:18:51.08:0,51,678	0/0:25,0:25:71.04:0,71,953	0/0:10,0:10:26.92:0,27,345	0/0:26,0:26:72.08:0,72,940	0/0:12,0:12:35.87:0,36,435	0/0:21,0:21:60.20:0,60,834	1/1:1,10:11:24.01:352,24,0	0/0:18,0:18:54.15:0,54,730	0/0:36,0:36:99:0,108,1485	0/0:27,0:27:81.27:0,81,1131	0/0:23,0:23:54.18:0,54,751	0/0:16,0:16:42.10:0,42,559	0/0:32,0:32:75.13:0,75,982	1/1:0,22:22:57.19:906,57,0	0/0:13,0:13:36.11:0,36,484	0/0:31,0:31:89.99:0,90,1204	0/0:15,0:15:42.07:0,42,562	0/1:1,10:11:8.70:445,0,9	0/0:14,0:14:39:0,39,516	1/1:3,6:9:18.06:287,18,0
chr10	104053809	.	AAT	A	7918.38	PASS	AB=0.517;AC=19;AF=0.339;AN=56;BaseQRankSum=17.798;DP=599;FS=0.000;HRun=0;HaplotypeScore=97.7749;InbreedingCoeff=0.9263;MQ=79.31;MQ0=0;MQRankSum=-4.554;QD=34.88;ReadPosRankSum=0.367;VQSLOD=6.8768;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1825	0/0:19,0:19:57.18:0,57,996	0/0:21,0:21:54.16:0,54,891	0/0:12,0:12:19.70:0,20,330	1/1:0,25:25:63.17:879,63,0	0/0:24,0:24:69.22:0,69,1231	0/0:23,0:23:63.22:0,63,1137	1/1:4,24:28:72.21:984,72,0	0/0:10,0:10:30.10:0,30,550	0/0:29,0:29:78.27:0,78,1425	0/0:30,0:30:87.27:0,87,1524	0/0:18,0:18:54.19:0,54,983	0/0:13,0:13:39.13:0,39,713	0/0:17,0:17:51.12:0,51,860	1/1:0,16:16:39.13:558,39,0	0/0:14,0:14:42.14:0,42,770	0/0:17,0:17:45.15:0,45,824	0/0:29,0:29:78.27:0,78,1416	1/1:3,21:24:63.18:861,63,0	1/1:4,33:37:93.22:1271,93,0	1/1:2,25:27:60.20:853,60,0	1/1:1,26:27:75.25:1074,75,0	0/0:22,0:22:66.23:0,66,1190	0/0:13,0:13:39.13:0,39,715	0/0:25,0:25:75.26:0,75,1374	0/1:1,14:15:9.91:518,0,10	1/1:2,16:18:44.98:619,45,0	1/1:0,10:10:21.07:301,21,0
chr10	104054415	.	TGAGAGAGAGAGAGA	T	3904.87	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=10.819;DP=823;FS=0.000;HRun=0;HaplotypeScore=335.9042;InbreedingCoeff=0.8791;MQ=70.94;MQ0=2;MQRankSum=-9.359;QD=26.03;ReadPosRankSum=1.518;VQSLOD=1.6561;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:77.47:0,77,4068	0/0:7,0:7:18:0,18,591	0/0:37,0:27:52.76:0,53,906	0/0:51,0:34:49.14:0,49,887	1/1:11,17:28:18.22:413,18,0	0/0:27,0:28:60.19:0,60,3318	0/0:28,0:30:83.33:0,83,3944	0/0:20,0:20:32.10:0,32,498	0/0:37,0:37:99:0,99,5008	0/0:39,0:40:99:0,102,4191	0/0:19,0:22:45.11:0,45,1906	0/0:20,0:25:57.64:0,58,3257	0/0:39,0:40:99:0,105,5600	0/0:40,0:41:96.12:0,96,4126	1/1:14,9:23:24.05:705,24,0	0/0:34,0:38:99:0,111,5499	0/0:24,0:25:63.18:0,63,3251	0/0:26,0:26:69.17:0,69,3165	0/1:20,0:20:39.10:39,0,416	0/0:30,0:29:42.59:0,43,669	0/0:33,0:33:23.99:0,24,232	1/1:20,15:35:18.03:578,18,0	0/0:22,0:25:66.16:0,66,3033	0/0:27,0:29:74.88:0,75,4634	0/0:23,0:26:69.14:0,69,3225	1/1:22,9:31:60.04:1523,60,0	0/0:29,0:30:22.90:0,23,433	1/1:6,7:13:21.01:647,21,0
chr10	104054431	.	AGAGAGAGG	A	4361.96	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=4.246;DP=828;FS=0.000;HRun=0;HaplotypeScore=243.5052;InbreedingCoeff=0.8456;MQ=57.50;MQ0=7;MQRankSum=-7.569;QD=12.43;ReadPosRankSum=-5.269;VQSLOD=2.6462;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:88.67:0,89,2429	0/0:10,0:10:29.07:0,29,443	0/1:37,0:20:5.08:5,0,211	0/1:53,0:23:9.23:9,0,369	1/1:30,0:30:20.77:223,21,0	0/0:27,0:27:69.29:0,69,2093	0/0:28,0:28:57.56:0,58,2162	1/1:26,0:26:67.70:595,68,0	0/0:42,0:42:99:0,103,3185	0/0:32,0:32:86.49:0,86,1929	0/0:20,0:20:44.62:0,45,1110	0/0:24,0:24:60.17:0,60,2056	0/0:34,0:34:87.27:0,87,3313	0/0:38,0:38:87.64:0,88,2383	1/1:22,0:22:24.05:337,24,0	0/0:45,0:45:99:0,120,3497	0/0:23,0:22:61.96:0,62,1999	0/0:28,0:28:58.03:0,58,2046	1/1:18,3:20:53.05:617,53,0	1/1:24,5:28:60.33:640,60,0	1/1:7,33:40:2.88:38,3,0	1/1:29,0:29:18.01:272,18,0	0/0:25,0:25:64.32:0,64,1573	0/0:40,0:40:99:0,108,3461	0/0:25,0:25:64.71:0,65,1693	1/1:25,0:25:38.02:831,38,0	1/1:6,21:26:26.99:519,27,0	1/1:12,0:12:20.68:276,21,0
chr10	104054439	.	GGA	G	237.86	PASS	AB=0.986;AC=14;AF=0.259;AN=54;BaseQRankSum=10.127;DP=826;FS=4.092;HRun=0;HaplotypeScore=182.0188;InbreedingCoeff=0.0708;MQ=59.70;MQ0=7;MQRankSum=-6.625;QD=0.76;ReadPosRankSum=3.502;VQSLOD=2.7161;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,3:38:23.52:0,24,772	0/0:12,0:12:26.65:0,27,323	0/1:31,0:14:9.47:9,0,146	0/0:52,0:22:22.41:0,22,206	0/1:30,0:30:5.26:5,0,68	0/0:31,0:31:45.72:0,46,922	0/0:28,0:28:62.90:0,63,877	0/0:30,0:30:8.84:0,9,86	0/0:38,2:40:31.77:0,32,1181	0/1:29,2:31:33.71:34,0,466	0/1:22,0:22:14.51:15,0,432	0/0:27,0:27:54.10:0,54,820	0/0:31,0:31:79.15:0,79,1249	0/1:31,3:34:12.58:13,0,793	0/1:26,0:26:7.03:31,0,7	0/0:46,1:47:32.28:0,32,1357	0/0:22,1:22:14.66:0,15,676	0/0:28,1:29:23.74:0,24,789	1/1:20,0:19:10.51:49,11,0	0/1:29,0:28:16.94:19,0,17	./.	0/1:25,0:25:11.22:31,0,11	0/0:23,0:23:31.21:0,31,441	0/0:42,1:43:99:0,108,1593	0/0:25,0:25:47.98:0,48,659	0/1:29,0:29:82.42:82,0,166	1/1:25,0:24:16.25:74,16,0	0/1:12,0:12:36.41:36,0,72
chr10	104054508	.	A	AGTGT	9466.37	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-3.371;DP=951;FS=3.477;HRun=0;HaplotypeScore=179.8573;InbreedingCoeff=0.9999;MQ=62.93;MQ0=2;MQRankSum=-3.446;QD=56.35;ReadPosRankSum=3.544;VQSLOD=5.6724;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:36:93.28:0,93,1529	0/0:13,0:13:33.09:0,33,499	0/0:56,0:41:50.12:0,50,981	0/0:59,0:51:95.01:0,95,1423	1/1:15,15:30:66.16:1415,66,0	0/0:41,0:41:99:0,105,1762	0/0:33,0:33:87.27:0,87,1440	0/0:40,0:40:89.79:0,90,1439	0/0:41,0:41:87.76:0,88,1669	0/0:43,0:43:99:0,117,1991	0/0:17,0:17:42.43:0,42,766	0/0:29,0:29:81.21:0,81,1360	0/0:33,0:33:98.35:0,98,1624	0/0:34,0:34:93.30:0,93,1574	1/1:3,40:44:99:2583,105,0	0/0:39,0:39:99:0,99,1617	0/0:25,0:25:62.68:0,63,1019	0/0:25,0:25:51.08:0,51,1013	0/0:27,0:27:72.23:0,72,1182	0/0:22,0:23:60.20:0,60,1004	0/0:55,0:55:99:0,117,1922	1/1:4,27:33:72.14:1759,72,0	0/0:17,0:17:48.14:0,48,774	0/0:48,0:48:99:0,126,2054	0/0:24,0:24:60.19:0,60,1009	1/1:6,28:34:85.16:2023,85,0	0/0:25,0:25:57.15:0,57,932	1/1:5,22:27:69.18:1686,69,0
chr10	104054558	.	T	TTG	6318.09	PASS	AB=0.627;AC=9;AF=0.161;AN=56;BaseQRankSum=-15.334;DP=1017;FS=2.925;HRun=0;HaplotypeScore=139.7857;InbreedingCoeff=0.8701;MQ=63.32;MQ0=1;MQRankSum=-0.647;QD=29.80;ReadPosRankSum=-1.144;VQSLOD=6.3358;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:48:99:0,103,1445	0/0:12,0:12:36.09:0,36,422	0/0:48,0:39:53.74:0,54,566	0/0:47,0:37:54.05:0,54,611	0/0:28,0:28:66.20:0,66,800	0/0:41,0:41:99:0,99,1175	0/0:34,0:35:81.06:0,81,955	1/1:19,28:47:84.24:1287,84,0	0/0:45,0:47:92.89:0,93,1058	0/0:49,0:49:99:0,99,1446	0/0:22,0:22:57.13:0,57,673	0/0:28,0:28:69.20:0,69,836	0/0:46,0:47:99:0,114,1342	0/0:30,0:30:60.14:0,60,711	0/0:40,0:41:80.95:0,81,912	0/0:43,0:43:99:0,105,1245	0/0:25,0:25:66.18:0,66,797	0/0:27,0:27:36.64:0,37,708	0/1:13,18:31:15.80:806,0,16	1/1:6,21:28:29.23:947,29,0	1/1:14,54:69:99:2006,123,0	0/0:34,0:34:75.04:0,75,866	0/0:19,0:19:42.13:0,42,517	0/0:49,0:49:99:0,103,1462	0/0:30,0:30:68.31:0,68,806	0/0:41,0:41:99:0,108,1280	1/1:6,30:36:78.27:1272,78,0	0/0:13,0:13:21.06:0,21,247
chr10	104055003	.	TG	T	5272.46	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=16.274;DP=681;FS=3.015;HRun=2;HaplotypeScore=82.7700;InbreedingCoeff=0.9992;MQ=81.77;MQ0=0;MQRankSum=-2.745;QD=34.92;ReadPosRankSum=1.178;VQSLOD=5.3561;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1916	0/0:12,0:12:33.11:0,33,493	0/0:19,0:19:51.03:0,51,740	0/0:19,0:19:50.98:0,51,676	0/0:10,0:10:30.09:0,30,428	0/0:17,0:17:51.15:0,51,725	0/0:32,0:32:96.27:0,96,1376	1/1:0,23:23:66.21:857,66,0	0/0:26,0:26:78.25:0,78,1149	0/0:19,0:19:54.17:0,54,775	0/0:12,0:12:30.10:0,30,449	0/0:34,0:34:99:0,99,1463	0/0:33,0:33:96.33:0,96,1438	0/0:30,0:30:87.25:0,87,1243	0/0:24,0:24:72.22:0,72,1039	0/0:14,0:14:39.13:0,39,585	0/0:32,0:32:90.29:0,90,1330	0/0:23,0:23:69.23:0,69,1032	1/1:1,21:22:63.19:797,63,0	1/1:0,20:20:60.20:779,60,0	1/1:0,76:76:99:2491,193,0	0/0:18,0:18:51.16:0,51,745	0/0:10,0:10:30.10:0,30,449	0/0:29,0:29:87.29:0,87,1303	0/0:29,0:28:75.25:0,75,1123	0/0:33,0:33:96.30:0,96,1384	1/1:0,10:10:27.09:349,27,0	0/0:10,0:10:30.10:0,30,450
chr10	104056204	.	CCT	C	6120.22	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.092;DP=635;FS=25.353;HRun=0;HaplotypeScore=97.6749;InbreedingCoeff=0.9706;MQ=64.43;MQ0=6;MQRankSum=-0.575;QD=31.23;ReadPosRankSum=0.290;VQSLOD=3.7348;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,2384	0/0:9,0:9:24.07:0,24,381	0/0:26,0:17:38.41:0,38,602	0/0:44,0:31:63.93:0,64,1026	1/1:0,14:14:30.06:433,30,0	0/0:25,0:25:72.24:0,72,1282	0/0:28,0:28:84.27:0,84,1444	1/1:2,21:23:57.45:667,57,0	0/0:25,0:25:72.22:0,72,1275	0/0:11,0:11:33.10:0,33,539	0/0:13,0:13:33.11:0,33,591	0/0:26,0:26:78.26:0,78,1331	0/0:32,0:32:90.25:0,90,1558	0/0:17,0:17:51.17:0,51,901	1/1:4,25:29:54.17:826,54,0	0/0:23,0:23:69.22:0,69,1195	0/0:24,0:24:72.24:0,72,1317	0/0:24,0:24:68.82:0,69,1234	1/1:0,12:12:33.06:412,33,0	1/1:0,20:20:53.97:711,54,0	1/1:2,22:24:17.56:572,18,0	1/1:2,11:13:27.09:413,27,0	0/0:14,0:14:39.13:0,39,700	0/0:32,0:32:93.01:0,93,1573	0/0:18,0:18:54.12:0,54,910	1/1:1,21:21:4.14:758,4,0	1/1:2,19:19:11.18:601,11,0	1/1:5,13:18:53.88:726,54,0
chr10	104060319	.	A	ACG	11759.62	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.718;DP=607;FS=0.314;HRun=0;HaplotypeScore=85.1132;InbreedingCoeff=0.9813;MQ=74.82;MQ0=2;MQRankSum=-3.846;QD=47.80;ReadPosRankSum=-0.423;VQSLOD=5.2633;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,117,1661	0/0:4,0:4:12.04:0,12,177	0/0:15,0:15:36.51:0,37,490	0/0:10,0:10:6.66:0,7,203	1/1:0,24:24:63.22:1177,63,0	0/0:21,0:21:63.21:0,63,926	0/0:19,0:19:51.16:0,51,732	1/1:2,35:37:99:1874,105,0	0/0:21,0:21:60.20:0,60,882	0/0:17,0:17:48.16:0,48,706	0/0:24,0:24:69.23:0,69,1016	0/0:18,0:18:54.18:0,54,788	0/0:30,0:30:87.28:0,87,1254	0/0:20,0:20:57.18:0,57,817	1/1:0,21:22:60.21:1121,60,0	0/0:12,0:12:33.11:0,33,486	0/0:17,0:17:45.12:0,45,640	0/0:17,0:17:51.17:0,51,749	1/1:3,11:15:42.13:739,42,0	1/1:3,19:21:51.17:951,51,0	1/1:3,38:43:99:1847,99,0	1/1:0,22:21:57.20:1064,57,0	0/0:26,0:26:72.23:0,72,1039	0/0:24,0:24:69.23:0,69,1012	0/0:20,0:20:60.19:0,60,863	1/1:3,26:29:81.25:1476,81,0	1/1:0,24:23:57.20:1062,57,0	1/1:0,8:8:24.08:448,24,0
chr10	104062078	.	G	GTA	632.68	PASS	AB=0.938;AC=10;AF=0.185;AN=54;BaseQRankSum=8.461;DP=407;FS=32.029;HRun=0;HaplotypeScore=85.8075;InbreedingCoeff=0.1560;MQ=45.83;MQ0=14;MQRankSum=-8.217;QD=5.50;ReadPosRankSum=1.474;VQSLOD=1.2324;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:74.86:0,75,758	0/0:4,0:4:8.97:0,9,71	0/0:9,0:2:6:0,6,66	0/0:19,0:4:12:0,12,113	1/1:9,0:9:6.02:89,6,0	0/0:15,0:14:29.97:0,30,285	0/0:18,0:18:41.94:0,42,405	0/1:18,0:17:55.45:134,0,55	0/0:17,0:17:32.97:0,33,372	0/0:13,0:13:34.92:0,35,313	0/0:9,0:9:14.97:0,15,120	0/0:17,0:17:41.84:0,42,360	0/0:10,0:10:26.82:0,27,299	0/0:14,0:14:15.53:0,16,241	0/1:17,0:17:31.61:120,0,32	0/0:7,0:7:17.93:0,18,162	0/0:20,0:20:5.72:0,6,357	0/0:17,0:17:41.99:0,42,480	0/1:12,0:9:19.22:76,0,19	0/1:13,0:11:10.95:29,0,11	0/0:23,0:20:7.04:0,7,81	1/1:10,0:9:5.93:54,6,0	0/0:14,0:14:26.89:0,27,238	0/0:22,0:21:38.95:0,39,393	0/0:11,0:10:29.98:0,30,324	0/1:21,0:19:79.31:232,0,79	0/1:6,8:13:35.95:42,0,36	./.
chr10	104062094	.	T	TC	573	PASS	AB=0.921;AC=14;AF=0.259;AN=54;BaseQRankSum=9.535;DP=331;FS=24.225;HRun=0;HaplotypeScore=65.5027;InbreedingCoeff=0.7646;MQ=56.95;MQ0=5;MQRankSum=-8.311;QD=6.51;ReadPosRankSum=-6.114;VQSLOD=0.8299;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.03:0,60,781	0/0:3,0:3:9.03:0,9,126	0/0:19,0:10:29.85:0,30,340	0/0:26,0:11:27.04:0,27,325	1/1:4,2:6:14.80:99,15,0	0/0:11,0:11:30.03:0,30,395	0/0:14,0:14:39.04:0,39,519	0/1:13,0:12:0.07:0,0,32	0/0:17,0:17:34.65:0,35,435	0/0:9,0:9:24.08:0,24,336	0/0:8,0:8:14.94:0,15,209	0/0:11,0:11:30.03:0,30,389	0/0:8,0:8:21.07:0,21,292	0/0:14,0:14:36.10:0,36,471	1/1:9,4:13:35.41:229,35,0	0/0:5,0:5:15.05:0,15,210	0/0:20,0:18:50.99:0,51,623	0/0:18,0:19:51.17:0,51,705	0/0:6,0:4:5.67:0,6,17	1/1:7,1:7:17.42:117,17,0	1/1:12,0:12:14.74:92,15,0	1/1:5,1:6:11.63:76,12,0	0/0:7,0:7:17.95:0,18,251	0/0:15,0:15:33.11:0,33,460	0/0:10,0:10:27.06:0,27,357	0/1:13,3:15:84.81:85,0,91	1/1:12,1:11:3.39:51,3,0	./.
chr10	104062209	.	ACT	A	182.06	PASS	AB=1.000;AC=15;AF=0.577;AN=26;BaseQRankSum=0.913;DP=176;FS=0.000;HRun=0;HaplotypeScore=34.2519;InbreedingCoeff=0.3992;MQ=91.21;MQ0=16;MQRankSum=2.236;QD=2.84;ReadPosRankSum=0.346;VQSLOD=1.2981;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:0.89:2,1,0	./.	./.	0/0:50,0:16:0.47:0,0,2	./.	0/0:7,0:7:8.99:0,9,74	0/0:5,0:5:3:0,3,26	./.	0/0:3,0:3:3:0,3,25	1/1:8,3:10:8.97:71,9,0	./.	1/1:5,0:5:3:26,3,0	0/0:6,0:5:8.99:0,9,75	./.	./.	./.	1/1:13,0:13:8.94:65,9,0	1/1:6,6:10:5.90:38,6,0	./.	./.	./.	./.	0/1:7,0:7:18.48:18,0,19	1/1:4,0:4:2.96:19,3,0	1/1:9,0:8:5.99:49,6,0	./.	./.	./.
chr10	104062319	.	T	TCACCACA	963.55	PASS	AB=1.000;AC=7;AF=0.159;AN=44;BaseQRankSum=4.255;DP=146;FS=64.870;HRun=0;HaplotypeScore=54.9833;InbreedingCoeff=0.5956;MQ=77.50;MQ0=1;MQRankSum=-5.870;QD=53.53;ReadPosRankSum=-1.685;VQSLOD=0.5195;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:45.61:0,46,1036	0/0:3,0:3:9.03:0,9,227	0/0:9,0:6:9.03:0,9,190	0/0:12,0:11:9.19:0,9,339	./.	0/0:1,0:1:3.01:0,3,76	0/0:5,0:5:15.05:0,15,378	1/1:4,3:7:15.02:414,15,0	0/0:5,0:5:15.04:0,15,317	0/0:11,0:11:33.11:0,33,799	0/0:7,0:7:21.07:0,21,529	0/0:5,0:5:15.04:0,15,327	0/0:6,0:6:18.06:0,18,453	0/0:8,0:8:21.07:0,21,498	./.	0/0:9,0:9:27.09:0,27,679	0/0:5,0:5:15.05:0,15,366	0/0:7,0:7:18.03:0,18,367	./.	./.	./.	1/1:4,0:4:3.01:89,3,0	0/0:4,0:4:12.04:0,12,301	0/0:2,0:2:6.02:0,6,151	0/0:3,0:3:9.03:0,9,227	0/1:2,0:2:69.52:106,0,70	./.	1/1:2,2:5:15.05:483,15,0
chr10	104062440	.	T	TTCTGTCAAA	12253.09	PASS	AB=0.613;AC=19;AF=0.339;AN=56;BaseQRankSum=-3.328;DP=461;FS=98.253;HRun=0;HaplotypeScore=125.4881;InbreedingCoeff=0.8682;MQ=57.80;MQ0=3;MQRankSum=-12.725;QD=79.05;ReadPosRankSum=-4.376;VQSLOD=1.1920;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:89.99:0,90,2388	0/0:2,0:2:6.02:0,6,174	0/0:30,0:23:39.01:0,39,883	0/0:20,0:18:33.11:0,33,893	1/1:0,9:12:29.85:627,30,0	0/0:16,0:16:39.13:0,39,1087	0/0:16,0:16:42.12:0,42,1058	1/1:14,8:23:45.14:1712,45,0	0/0:16,0:16:36.12:0,36,1041	0/0:21,0:21:48.16:0,48,1388	0/0:9,0:9:27.09:0,27,781	0/0:9,0:9:27.08:0,27,721	0/0:12,0:12:21.07:0,21,607	0/0:14,0:14:33.11:0,33,917	1/1:5,18:29:60.12:2408,60,0	0/0:22,0:22:66.22:0,66,1848	0/0:26,0:26:63.16:0,63,1545	0/0:22,0:22:54.19:0,54,1538	1/1:6,6:12:30.03:1017,30,0	1/1:7,5:12:27.05:918,27,0	1/1:5,1:6:12.04:487,12,0	1/1:6,16:23:48.12:1877,48,0	0/0:10,0:10:21.03:0,21,541	0/0:23,0:23:54.17:0,54,1461	0/0:5,0:5:15.04:0,15,373	0/1:7,9:19:99:1490,0,125	1/1:3,9:15:36.12:1577,36,0	1/1:1,2:3:3.01:141,3,0
chr10	104064312	.	TGC	T	1164.99	PASS	AB=0.855;AC=29;AF=0.580;AN=50;BaseQRankSum=4.397;DP=406;FS=40.983;HRun=0;HaplotypeScore=48.5825;InbreedingCoeff=-0.3888;MQ=32.67;MQ0=56;MQRankSum=-3.467;QD=3.01;ReadPosRankSum=0.056;VQSLOD=0.3555;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,1:19:99:184,0,124	0/1:5,1:6:45.63:46,0,104	1/1:76,0:3:0.47:1,0,0	0/1:81,0:4:0.15:0,0,0	1/1:3,1:3:6.02:76,6,0	0/1:12,0:10:29.50:29,0,143	0/1:7,2:8:27.52:28,0,155	0/1:2,1:3:11.74:12,0,37	0/0:6,4:7:9.29:0,9,93	0/1:22,3:25:43.03:43,0,484	0/1:8,1:11:77.98:78,0,85	0/1:3,3:6:10.46:10,0,21	0/0:4,0:4:3.89:0,4,33	0/1:6,1:6:8.13:8,0,61	1/1:1,1:2:6.02:78,6,0	0/1:6,1:6:46.52:93,0,47	0/1:21,8:27:52.72:53,0,216	0/1:11,4:8:39.40:96,0,39	./.	./.	./.	1/1:0,5:5:8.96:88,9,0	0/1:9,3:10:35.41:35,0,93	0/1:10,0:7:20.34:20,0,90	0/1:20,5:24:99:279,0,215	1/1:2,0:2:0.89:2,1,0	0/1:2,0:1:0:0,0,0	1/1:11,1:7:3.01:41,3,0
chr10	104064369	.	G	GCCTT	7655.44	PASS	AB=0.593;AC=19;AF=0.352;AN=54;BaseQRankSum=2.715;DP=348;FS=0.486;HRun=0;HaplotypeScore=63.0633;InbreedingCoeff=0.8301;MQ=44.25;MQ0=31;MQRankSum=-8.045;QD=49.07;ReadPosRankSum=-2.755;VQSLOD=4.2274;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:17:33.11:0,33,616	0/0:5,0:5:9.03:0,9,168	0/0:2,0:2:3.01:0,3,38	./.	1/1:4,13:14:36.12:874,36,0	0/0:17,0:15:36.12:0,36,672	0/0:12,0:9:21.07:0,21,392	1/1:11,12:23:54.14:1303,54,0	0/0:9,0:8:18.06:0,18,336	0/0:19,0:17:51.17:0,51,923	0/0:12,0:10:17.96:0,18,335	0/0:9,0:8:24.08:0,24,440	0/0:11,0:9:21.05:0,21,360	0/0:4,0:4:9.03:0,9,168	1/1:0,10:10:24.08:639,24,0	0/0:8,0:8:21.07:0,21,389	0/0:24,0:22:54.19:0,54,997	0/0:14,0:13:36.12:0,36,672	1/1:4,8:9:27.09:712,27,0	1/1:6,12:14:36.11:902,36,0	1/1:6,4:10:8.99:139,9,0	1/1:4,10:14:30.09:703,30,0	0/0:3,0:1:3.01:0,3,56	0/0:11,0:10:24.08:0,24,448	0/0:6,0:6:15.05:0,15,280	0/1:5,11:15:70.71:790,0,71	1/1:5,20:22:48.16:1234,48,0	1/1:4,6:8:15.05:360,15,0
chr10	104064416	.	GC	G	3852.65	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=11.883;DP=428;FS=1.894;HRun=6;HaplotypeScore=69.3120;InbreedingCoeff=0.9681;MQ=64.56;MQ0=4;MQRankSum=-3.437;QD=25.35;ReadPosRankSum=-1.772;VQSLOD=2.9240;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:84.24:0,84,1070	0/0:6,0:6:12.04:0,12,158	0/0:24,0:13:29.19:0,29,273	0/0:19,0:11:16.49:0,16,240	1/1:4,10:14:38.78:377,39,0	0/0:17,0:17:48.11:0,48,601	0/0:13,0:13:32.99:0,33,367	1/1:9,8:17:35.99:344,36,0	0/0:14,0:14:36.01:0,36,423	0/0:19,0:19:57.14:0,57,684	0/0:8,0:8:24.02:0,24,257	0/0:8,0:8:24.06:0,24,289	0/0:11,0:11:33.11:0,33,428	0/0:7,0:7:18.05:0,18,224	1/1:1,12:13:39.08:410,39,0	0/0:12,0:12:33.10:0,33,421	0/0:31,0:31:77.73:0,78,980	0/0:22,0:22:57.04:0,57,679	1/1:1,16:15:45.03:448,45,0	1/1:5,16:21:48.08:492,48,0	1/1:2,11:13:30.08:321,30,0	1/1:3,10:13:29.97:294,30,0	0/0:4,0:4:12.04:0,12,157	0/0:20,0:20:57.14:0,57,727	0/0:8,0:8:20.10:0,20,273	1/1:3,16:19:15.08:494,15,0	1/1:5,17:22:60.10:616,60,0	1/1:2,1:3:6:55,6,0
chr10	104064811	.	C	CT	1917.93	PASS	AB=0.706;AC=17;AF=0.304;AN=56;BaseQRankSum=-1.316;DP=461;FS=2.152;HRun=11;HaplotypeScore=59.4584;InbreedingCoeff=0.3847;MQ=76.38;MQ0=1;MQRankSum=1.270;QD=10.42;ReadPosRankSum=-3.655;VQSLOD=2.0503;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:62.73:0,63,488	0/1:5,1:8:11.32:11,0,86	0/0:22,0:13:7.22:0,7,33	0/1:22,0:19:9.08:9,0,71	0/1:7,8:15:18.93:175,0,19	0/0:15,0:15:35.84:0,36,278	0/0:11,0:11:20.91:0,21,163	1/1:9,18:27:11.20:403,11,0	0/0:11,0:11:29.89:0,30,232	0/0:21,0:21:32.77:0,33,254	0/0:19,0:19:47.80:0,48,371	0/0:9,0:9:4.35:0,4,143	0/0:9,0:9:20.91:0,21,162	0/0:17,1:19:19.48:0,19,318	0/1:4,16:21:7.56:280,0,8	0/0:17,0:18:49.84:0,50,376	0/0:28,3:33:36.37:0,36,434	0/0:28,1:30:34.16:0,34,436	0/1:6,10:16:33.73:211,0,34	1/1:9,5:15:29.56:265,30,0	1/1:1,6:7:9.02:90,9,0	0/1:5,8:13:19.36:186,0,19	0/0:14,0:14:23.87:0,24,186	0/0:9,0:9:20.88:0,21,162	0/0:11,1:12:2.44:0,2,201	1/1:3,8:11:15.03:152,15,0	0/1:6,10:16:5.20:134,0,5	1/1:2,7:9:18.04:183,18,0
chr10	104068435	.	AGTGTGT	A	894.69	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.060;DP=592;FS=0.000;HRun=0;HaplotypeScore=137.7726;InbreedingCoeff=0.8413;MQ=74.32;MQ0=9;MQRankSum=-2.658;QD=12.43;ReadPosRankSum=0.982;VQSLOD=2.7670;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:57.16:0,57,1573	0/0:11,0:11:17.66:0,18,428	0/0:28,0:21:12.01:0,12,199	0/0:34,0:29:15.03:0,15,178	1/1:17,4:20:17.76:272,18,0	0/0:11,0:11:18.04:0,18,508	0/0:37,0:35:72.23:0,72,1830	0/0:19,0:18:16.59:0,17,229	0/0:17,0:19:39.12:0,39,1042	0/0:24,0:23:39.13:0,39,1034	0/0:10,0:10:12.04:0,12,257	0/0:21,0:23:42.10:0,42,1010	0/0:14,0:16:21.94:0,22,468	0/0:21,0:21:48.14:0,48,1251	1/1:8,2:10:15.05:253,15,0	0/0:17,0:18:33.57:0,34,752	0/0:29,0:28:41.93:0,42,954	0/0:14,0:16:33.03:0,33,807	0/0:25,0:24:6.47:0,6,167	0/0:16,0:17:5.47:0,5,84	0/0:40,0:41:7.55:0,8,217	1/1:5,8:14:9.03:135,9,0	0/0:12,0:11:5.94:0,6,188	0/0:29,0:33:22.68:0,23,1808	0/0:16,0:17:39.34:0,39,1018	1/1:11,2:12:15.05:294,15,0	0/0:22,0:20:30.02:0,30,255	1/1:9,3:13:6.02:100,6,0
chr10	104068464	.	GTGCGTT	G	1364.14	PASS	AB=0.973;AC=22;AF=0.393;AN=56;BaseQRankSum=8.078;DP=592;FS=14.894;HRun=0;HaplotypeScore=135.8043;InbreedingCoeff=-0.0163;MQ=51.28;MQ0=29;MQRankSum=-2.886;QD=3.76;ReadPosRankSum=-3.617;VQSLOD=0.5605;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:59.49:0,59,1191	0/0:11,0:11:2.11:0,2,187	0/1:7,0:3:17.98:18,0,42	0/1:6,0:4:0.48:19,0,0	0/1:20,0:18:6.21:39,0,6	0/1:16,0:15:31.21:31,0,402	0/0:49,0:43:71.76:0,72,1207	0/1:24,0:17:99:116,0,150	0/0:18,0:18:48:0,48,869	0/1:22,0:20:48.73:49,0,462	0/0:15,0:15:14.06:0,14,110	0/0:21,0:20:42.17:0,42,550	0/1:16,0:16:23.26:23,0,286	0/0:27,0:26:29.61:0,30,980	1/1:12,0:11:8.27:49,8,0	0/0:14,0:13:26.82:0,27,460	0/0:26,0:25:23.63:0,24,719	0/1:21,0:20:7.52:8,0,701	0/1:22,0:18:77.50:252,0,78	0/1:6,9:15:7.51:27,0,8	0/1:45,0:41:35.40:172,0,35	1/1:17,0:17:11.72:133,12,0	0/0:19,0:17:26.49:0,26,364	0/1:45,0:44:39.27:39,0,1713	0/1:23,0:22:16.41:16,0,850	0/1:21,0:20:90.84:216,0,91	1/1:22,0:20:13.64:229,14,0	1/1:9,0:7:10.83:102,11,0
chr10	104068466	.	GCGTT	G	1400.74	PASS	AB=0.963;AC=24;AF=0.429;AN=56;BaseQRankSum=8.318;DP=581;FS=16.822;HRun=0;HaplotypeScore=117.3686;InbreedingCoeff=-0.0903;MQ=51.34;MQ0=29;MQRankSum=-2.446;QD=3.60;ReadPosRankSum=-1.738;VQSLOD=1.1521;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:56.50:0,56,1015	0/1:10,0:10:4.50:4,0,124	0/1:6,0:3:17.98:18,0,42	0/1:3,0:2:0.61:19,0,1	0/1:19,0:17:5.97:39,0,6	0/1:16,0:15:31.21:31,0,366	0/0:49,0:43:57.68:0,58,1191	0/1:22,0:15:99:115,0,153	0/0:18,0:18:50.98:0,51,789	0/1:19,0:17:49.13:49,0,400	0/0:15,0:15:14.06:0,14,110	0/0:21,0:20:31.17:0,31,488	0/1:16,0:16:23.91:24,0,220	0/0:27,0:26:29.62:0,30,840	1/1:12,0:11:8.17:37,8,0	0/0:15,0:14:29.41:0,29,419	0/1:25,0:24:29.64:30,0,530	0/1:23,0:21:4.64:5,0,624	0/1:21,0:18:87.96:251,0,88	0/1:14,0:14:7.44:27,0,7	0/1:16,29:41:35.17:172,0,35	1/1:17,0:17:11.62:125,12,0	0/0:18,0:16:29.50:0,30,393	0/1:46,0:45:57.80:58,0,1463	0/1:23,0:22:17.21:17,0,672	0/1:21,0:20:91.97:216,0,92	1/1:18,3:19:16.89:235,17,0	1/1:9,0:7:10.83:102,11,0
chr10	104068467	.	CGTTT	C	222.19	PASS	AB=0.976;AC=12;AF=0.214;AN=56;BaseQRankSum=7.885;DP=579;FS=3.977;HRun=0;HaplotypeScore=121.6205;InbreedingCoeff=-0.0769;MQ=51.28;MQ0=29;MQRankSum=0.084;QD=1.04;ReadPosRankSum=-0.217;VQSLOD=2.3586;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:57.25:0,57,794	0/0:10,0:10:4.96:0,5,90	0/0:6,0:3:2.97:0,3,27	0/0:3,0:2:2.01:0,2,6	0/1:18,0:16:8.73:9,0,17	0/1:16,0:15:19.19:19,0,352	0/0:48,0:42:86.52:0,87,1282	0/0:23,0:16:3.64:0,4,155	0/0:17,0:17:51.08:0,51,829	0/1:13,6:17:6.76:7,0,269	0/0:15,0:15:19.76:0,20,122	0/0:21,0:20:16.69:0,17,487	0/0:15,0:15:4.92:0,5,234	0/0:26,0:25:34.40:0,34,821	0/1:11,0:10:4.52:5,0,9	0/0:15,0:14:19.31:0,19,397	0/0:26,0:25:1.33:0,1,613	0/0:24,0:21:38.66:0,39,722	0/1:21,0:18:67.94:68,0,112	0/1:14,0:14:8.02:8,0,26	0/1:45,0:41:53.94:60,0,54	1/1:17,0:17:8.55:51,9,0	0/0:18,0:16:31.10:0,31,518	0/0:46,0:45:55.48:0,55,1636	0/0:24,0:23:15.02:0,15,718	0/1:22,0:21:45.14:45,0,111	0/1:21,0:19:16.37:66,0,16	0/1:9,0:7:7.86:28,0,8
chr10	104068468	.	GTT	G	304.07	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=8.056;DP=576;FS=3.634;HRun=3;HaplotypeScore=105.6659;InbreedingCoeff=-0.0386;MQ=51.42;MQ0=29;MQRankSum=0.009;QD=1.13;ReadPosRankSum=0.526;VQSLOD=-0.5472;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,6:29:58.06:0,58,609	0/0:10,0:10:5.19:0,5,90	0/0:3,0:2:2.97:0,3,27	0/0:3,0:1:1.82:0,2,5	0/1:19,0:17:8.81:16,0,9	0/1:16,0:15:5.44:5,0,262	0/0:48,0:42:69.61:0,70,1118	0/0:24,0:16:3.76:0,4,157	0/0:17,0:17:51.01:0,51,686	0/1:19,0:17:70.80:71,0,188	0/0:16,0:16:6.34:0,6,53	0/0:20,0:19:16.68:0,17,432	0/1:15,0:15:14.90:15,0,185	0/0:24,0:23:9.95:0,10,532	0/0:11,0:10:1.72:0,2,5	0/0:13,0:13:19.28:0,19,316	0/1:26,0:25:19.83:20,0,419	0/0:23,0:21:27.42:0,27,529	0/1:21,0:18:45.70:46,0,112	0/1:14,0:14:7.92:8,0,27	0/1:45,0:41:53.65:60,0,54	1/1:17,0:17:5.45:43,5,0	0/0:19,0:17:34.06:0,34,425	0/0:46,0:45:33.27:0,33,1136	0/1:24,0:23:8.73:9,0,500	0/1:22,0:21:16.63:17,0,109	0/1:22,0:20:6.47:67,0,6	1/1:9,0:7:10.68:81,11,0
chr10	104068470	.	TTGTGTG	T	646.45	PASS	AB=0.975;AC=16;AF=0.308;AN=52;BaseQRankSum=5.159;DP=578;FS=4.129;HRun=0;HaplotypeScore=136.9340;InbreedingCoeff=0.5560;MQ=51.47;MQ0=29;MQRankSum=-1.858;QD=3.28;ReadPosRankSum=-2.569;VQSLOD=1.9585;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:36.12:0,36,814	0/0:6,0:12:11.74:0,12,150	./.	./.	1/1:13,7:18:2.37:13,2,0	0/0:17,0:16:7.17:0,7,381	0/0:46,0:41:57.11:0,57,1361	1/1:16,0:16:12.40:59,12,0	0/0:17,0:17:30.10:0,30,882	0/0:19,0:17:15.56:0,16,225	0/0:9,0:16:14.89:0,15,138	0/0:20,0:19:21.07:0,21,540	0/0:14,0:15:14.79:0,15,306	0/0:24,0:23:44.64:0,45,969	1/1:5,5:10:5.98:82,6,0	0/0:13,0:13:15.05:0,15,398	0/0:25,0:24:37.84:0,38,856	0/0:24,0:21:32.70:0,33,781	0/1:20,0:17:9.65:24,0,10	1/1:14,0:14:0.37:1,0,0	1/1:46,0:42:2.67:28,3,0	0/1:18,1:19:14.20:228,0,14	0/0:18,0:16:24.08:0,24,659	0/0:45,0:45:83.01:0,83,2022	0/0:23,0:22:35.95:0,36,837	1/1:15,7:21:2.09:354,2,0	1/1:14,0:19:0.46:3,0,0	0/0:9,0:7:7:0,7,52
chr10	104069264	.	T	TTATC	3788.90	PASS	AB=0.784;AC=11;AF=0.212;AN=52;BaseQRankSum=-7.948;DP=728;FS=2.514;HRun=0;HaplotypeScore=129.4299;InbreedingCoeff=0.4627;MQ=62.65;MQ0=5;MQRankSum=-0.046;QD=17.30;ReadPosRankSum=-2.302;VQSLOD=2.9901;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,16:37:40.75:998,0,41	0/0:13,0:13:12.03:0,12,164	./.	./.	0/1:18,11:30:21.87:466,0,22	0/0:12,0:25:27.03:0,27,252	0/0:22,0:34:26.83:0,27,229	0/1:38,0:38:0:0,0,0	0/0:36,0:36:57.19:0,57,846	1/1:18,12:32:45.14:976,45,0	1/1:13,0:17:11.07:161,11,0	0/0:27,0:27:33.10:0,33,478	0/0:13,0:13:12.04:0,12,184	0/0:37,0:37:51.16:0,51,752	1/1:10,5:15:12.04:279,12,0	0/0:17,0:17:18.06:0,18,276	0/0:22,0:21:12.75:0,13,394	0/0:30,0:31:27.14:0,27,615	0/0:18,0:18:12.03:0,12,163	0/0:24,0:24:24.08:0,24,366	0/0:36,0:36:45.14:0,45,668	0/1:12,8:21:18.86:531,0,19	0/0:20,0:20:24.06:0,24,346	0/0:19,0:19:30.09:0,30,437	0/1:19,6:27:99:378,0,284	0/0:28,0:28:42.13:0,42,599	0/0:30,0:32:45.14:0,45,653	0/0:23,0:22:48.16:0,48,732
chr10	104073898	.	A	AGAGC	6942.51	PASS	AB=0.541;AC=19;AF=0.339;AN=56;BaseQRankSum=-0.826;DP=643;FS=6.454;HRun=0;HaplotypeScore=132.5258;InbreedingCoeff=0.9044;MQ=68.63;MQ0=54;MQRankSum=-8.009;QD=34.20;ReadPosRankSum=-5.043;VQSLOD=3.4636;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:79.77:0,80,1344	0/0:7,0:5:12.03:0,12,188	0/0:23,0:23:48.05:0,48,790	0/0:23,0:21:38.78:0,39,592	0/1:3,17:20:7.02:310,0,7	0/0:17,0:16:42.13:0,42,726	0/0:28,0:21:48:0,48,728	1/1:8,9:14:22.69:393,23,0	0/0:22,0:21:48.96:0,49,820	0/0:23,0:19:45.13:0,45,728	0/0:18,0:16:39.13:0,39,696	0/0:24,0:20:44.56:0,45,875	0/0:13,0:12:33.06:0,33,558	0/0:25,0:22:60.09:0,60,981	1/1:9,22:31:75.04:1622,75,0	0/0:17,0:15:42.14:0,42,755	0/0:32,0:28:72.24:0,72,1260	0/0:34,0:24:57.19:0,57,1003	1/1:4,9:12:25.99:492,26,0	1/1:5,5:10:5.51:69,6,0	1/1:10,16:21:20.14:530,20,0	1/1:6,13:19:20.88:484,21,0	0/0:26,0:24:53.83:0,54,931	0/0:53,0:45:99:0,106,1719	0/0:20,0:18:51.15:0,51,836	1/1:13,21:32:66.79:1540,67,0	1/1:4,23:27:47.37:1191,47,0	1/1:0,6:6:12.04:311,12,0
chr10	104073911	.	A	AGAGC	1412.48	PASS	AB=0.924;AC=9;AF=0.161;AN=56;BaseQRankSum=5.871;DP=555;FS=11.623;HRun=0;HaplotypeScore=123.5862;InbreedingCoeff=0.1300;MQ=58.55;MQ0=75;MQRankSum=-9.554;QD=10.39;ReadPosRankSum=-4.105;VQSLOD=1.2283;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:70.01:0,70,1084	0/0:5,0:3:9.02:0,9,135	0/0:15,0:14:24.07:0,24,372	0/0:18,0:16:24.06:0,24,376	0/1:10,0:10:3.58:4,0,115	0/0:15,0:13:39.11:0,39,645	0/0:24,0:16:36.97:0,37,616	1/1:10,0:7:3.39:55,3,0	0/0:18,0:15:36.08:0,36,586	0/0:18,0:13:30.08:0,30,508	0/0:15,0:13:33.08:0,33,534	0/0:25,0:20:38.53:0,39,767	0/0:12,0:11:27.07:0,27,429	0/0:24,0:21:48.12:0,48,750	0/1:25,4:29:7.29:824,0,7	0/0:16,0:14:42.14:0,42,755	0/0:29,0:22:63.13:0,63,1037	0/0:34,0:20:48.58:0,49,799	0/1:11,1:9:59.92:124,0,60	0/1:10,0:9:0.02:0,0,0	0/0:27,4:18:19.10:0,19,167	0/1:17,1:18:99:122,0,115	0/0:19,0:17:39.10:0,39,641	0/0:49,0:39:81.97:0,82,1263	0/0:16,0:14:42.09:0,42,641	0/1:18,6:21:99:311,0,231	0/1:21,2:22:99:101,0,214	0/0:5,0:5:8.83:0,9,61
chr10	104073924	.	A	AGAGC	2528.34	PASS	AB=0.735;AC=14;AF=0.250;AN=56;BaseQRankSum=9.232;DP=464;FS=9.242;HRun=0;HaplotypeScore=92.0386;InbreedingCoeff=0.5645;MQ=50.76;MQ0=104;MQRankSum=-8.562;QD=22.18;ReadPosRankSum=-0.176;VQSLOD=2.7120;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:19:47.99:0,48,730	0/0:4,0:2:6.02:0,6,108	0/0:7,0:6:6.01:0,6,60	0/0:7,0:6:2.98:0,3,22	1/1:7,1:8:2.82:24,3,0	0/0:13,0:11:30.03:0,30,475	0/0:21,0:13:29.19:0,29,364	0/1:3,1:4:12.48:69,0,12	0/0:14,0:10:27.07:0,27,429	0/0:14,0:9:15.05:0,15,270	0/0:11,0:9:21.03:0,21,292	0/0:25,0:18:26.44:0,26,522	0/0:10,0:7:18.06:0,18,323	0/0:20,0:15:21.68:0,22,458	1/1:10,15:23:12.09:1232,12,0	0/0:16,0:14:36.10:0,36,590	0/0:30,0:19:48.15:0,48,832	0/0:33,0:15:37.36:0,37,607	1/1:9,1:6:6.02:126,6,0	0/1:2,4:5:0:0,0,0	0/0:28,2:15:5.24:0,5,60	1/1:9,10:17:15.32:283,15,0	0/0:14,0:12:27.04:0,27,394	0/0:42,0:28:64.91:0,65,1107	0/0:13,0:10:26.81:0,27,346	0/1:18,3:17:35.06:464,0,35	1/1:12,5:16:18.85:349,19,0	0/1:2,2:4:4.96:146,0,5
chr10	104075514	.	A	AC	2600.66	PASS	AB=0.667;AC=19;AF=0.339;AN=56;BaseQRankSum=-7.973;DP=414;FS=16.677;HRun=7;HaplotypeScore=44.5137;InbreedingCoeff=0.8839;MQ=77.13;MQ0=0;MQRankSum=-1.886;QD=21.49;ReadPosRankSum=-1.006;VQSLOD=1.7614;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.04:0,75,705	0/0:3,0:3:6:0,6,58	0/0:17,0:15:18.06:0,18,177	0/0:18,0:16:30.31:0,30,262	1/1:0,6:6:9.03:109,9,0	0/0:19,0:19:45.06:0,45,430	0/0:20,0:20:51.08:0,51,492	1/1:4,10:15:27.07:307,27,0	0/0:22,0:22:60.09:0,60,579	0/0:12,0:12:33.05:0,33,319	0/0:8,0:8:21.03:0,21,202	0/0:17,0:17:48.08:0,48,463	0/0:13,0:13:30.04:0,30,290	0/0:6,0:6:12.01:0,12,116	1/1:2,15:17:45.14:544,45,0	0/0:8,0:8:24.04:0,24,232	0/0:32,0:32:87.13:0,87,840	0/0:19,0:19:48.07:0,48,463	1/1:4,9:13:23.94:268,24,0	1/1:2,7:9:17.99:198,18,0	1/1:2,17:19:36.11:434,36,0	1/1:2,9:11:21:235,21,0	0/0:14,0:14:41.97:0,42,392	0/0:19,0:19:48.07:0,48,463	0/0:19,0:19:48.07:0,48,463	0/1:7,7:14:30.80:214,0,31	1/1:1,9:11:27.08:324,27,0	1/1:0,6:6:15.05:179,15,0
chr10	104078380	.	TCCACCC	T	2505.70	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=7.397;DP=269;FS=16.803;HRun=0;HaplotypeScore=67.5766;InbreedingCoeff=0.8819;MQ=65.75;MQ0=0;MQRankSum=-4.811;QD=26.66;ReadPosRankSum=2.380;VQSLOD=1.6248;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.07:0,39,859	0/0:3,0:3:6.02:0,6,173	0/0:10,0:8:12.04:0,12,238	0/0:11,0:9:9.47:0,9,172	1/1:1,13:14:23.97:424,24,0	0/0:9,0:9:24.08:0,24,716	0/0:22,0:22:54.15:0,54,1479	1/1:4,2:6:5.98:86,6,0	0/0:10,0:10:30.10:0,30,979	0/0:8,0:8:12.03:0,12,331	0/0:7,0:7:12.04:0,12,397	0/0:12,0:12:33.05:0,33,880	0/0:10,0:10:29.96:0,30,620	0/0:10,0:10:27.04:0,27,772	1/1:1,6:7:9.03:194,9,0	0/0:11,0:11:23.28:0,23,596	0/0:11,0:11:30.07:0,30,754	0/0:6,0:6:18.02:0,18,416	1/1:6,0:6:5.97:47,6,0	1/1:3,7:10:20.97:362,21,0	1/1:1,7:8:6.02:129,6,0	1/1:5,12:17:33.11:710,33,0	0/0:8,0:8:11.68:0,12,281	0/0:6,0:6:17.98:0,18,448	0/0:8,0:8:24.05:0,24,510	1/1:3,8:11:18.01:306,18,0	1/1:3,6:9:8.88:194,9,0	1/1:1,5:6:12.04:259,12,0
chr10	104078522	.	AAC	A	78.72	PASS	AB=0.936;AC=7;AF=0.135;AN=52;BaseQRankSum=1.120;DP=543;FS=4.143;HRun=0;HaplotypeScore=81.4279;InbreedingCoeff=-0.0003;MQ=62.17;MQ0=11;MQRankSum=-0.034;QD=0.67;ReadPosRankSum=0.297;VQSLOD=1.0949;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:29:6.05:0,6,463	0/0:3,0:3:3.01:0,3,42	./.	./.	0/0:17,0:17:10.76:0,11,80	0/0:17,0:17:24.08:0,24,357	0/1:36,1:39:38.35:38,0,453	0/0:20,0:18:17.83:0,18,126	0/0:23,0:23:27.06:0,27,370	0/1:15,0:15:5.57:6,0,220	1/1:2,2:4:6.02:66,6,0	0/0:20,1:21:3:0,3,390	0/0:18,0:18:21.06:0,21,312	0/0:13,0:13:24.06:0,24,329	0/0:18,0:18:22.16:0,22,181	0/1:13,2:15:15.01:15,0,184	0/0:26,3:29:15.09:0,15,619	0/1:24,3:28:60.09:60,0,313	0/0:14,0:14:9.49:0,9,105	0/0:11,0:12:3.01:0,3,43	0/0:54,0:59:51.48:0,51,449	0/0:8,0:8:5.36:0,5,32	0/0:6,0:6:3.01:0,3,42	0/0:21,1:21:0.04:0,0,394	0/1:15,1:16:11.98:12,0,226	0/0:16,0:15:23.46:0,23,190	0/0:15,0:19:18:0,18,187	0/0:12,0:11:8.94:0,9,66
chr10	104078562	.	CCT	C	924.69	PASS	AB=0.971;AC=10;AF=0.179;AN=56;BaseQRankSum=6.656;DP=592;FS=24.878;HRun=0;HaplotypeScore=91.1195;InbreedingCoeff=0.7029;MQ=69.94;MQ0=18;MQRankSum=-1.441;QD=6.85;ReadPosRankSum=-3.477;VQSLOD=0.8853;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:54.08:0,54,1176	0/0:6,0:6:11.97:0,12,170	0/0:37,0:15:43.82:0,44,680	0/0:43,0:24:57.24:0,57,1140	1/1:5,3:8:11.77:114,12,0	0/0:17,0:17:45.14:0,45,747	0/0:33,0:33:97.56:0,98,1633	0/0:22,0:21:57.18:0,57,994	0/0:30,0:30:78.26:0,78,1331	0/0:20,0:19:42.13:0,42,728	0/0:9,0:9:23.89:0,24,325	0/0:21,0:21:54.12:0,54,954	0/0:20,0:20:54.17:0,54,945	0/0:14,0:14:39.13:0,39,697	1/1:12,6:19:22.85:282,23,0	0/0:16,0:16:38.99:0,39,596	0/0:34,0:33:83.65:0,84,1470	0/0:28,0:28:80.52:0,81,1234	0/0:20,0:20:38.96:0,39,817	0/0:9,0:9:12.04:0,12,192	0/1:66,0:66:72.29:72,0,1725	1/1:6,6:12:12.39:116,12,0	0/0:3,0:3:6.02:0,6,97	0/0:27,0:27:81.19:0,81,1401	0/0:11,0:11:15.86:0,16,239	0/1:15,1:15:15.63:369,0,16	0/0:11,0:11:24.08:0,24,392	1/1:0,12:14:14.45:135,14,0
chr10	104078770	.	C	CATCTATCT	1457.43	PASS	AB=0.693;AC=10;AF=0.192;AN=52;BaseQRankSum=1.076;DP=749;FS=4.027;HRun=0;HaplotypeScore=193.0992;InbreedingCoeff=0.8060;MQ=57.47;MQ0=7;MQRankSum=-4.268;QD=9.17;ReadPosRankSum=-3.992;VQSLOD=1.8306;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:62.43:0,62,1330	0/1:10,0:13:7.03:101,0,7	./.	./.	0/0:27,0:27:38.91:0,39,720	0/0:28,0:28:45.08:0,45,837	0/0:26,0:26:48.08:0,48,812	1/1:37,0:36:35.82:327,36,0	0/0:39,0:39:59.95:0,60,1258	0/0:31,0:31:54.11:0,54,1022	0/0:18,0:18:35.67:0,36,763	0/0:32,0:33:60.17:0,60,1286	0/0:29,0:29:33.11:0,33,774	0/0:25,0:25:48.08:0,48,834	0/0:44,0:44:74.99:0,75,1376	0/0:27,0:27:48.13:0,48,959	0/0:21,0:21:21.07:0,21,524	0/0:21,0:21:38.92:0,39,826	1/1:10,9:21:38.48:682,38,0	0/1:8,18:31:0:1,0,0	1/1:19,0:19:21.05:375,21,0	0/0:30,0:30:42.11:0,42,875	0/0:18,0:18:36.10:0,36,732	0/0:18,0:20:20.89:0,21,449	0/0:39,0:39:78.20:0,78,1545	0/0:34,0:34:62.24:0,62,1326	1/1:17,14:36:3.01:123,3,0	0/0:20,0:20:36.02:0,36,664
chr10	104079086	.	C	CT	3522.22	PASS	AB=0.710;AC=19;AF=0.339;AN=56;BaseQRankSum=0.163;DP=636;FS=0.377;HRun=12;HaplotypeScore=92.4391;InbreedingCoeff=0.7994;MQ=72.11;MQ0=0;MQRankSum=-0.284;QD=13.87;ReadPosRankSum=-0.492;VQSLOD=3.6914;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,1:47:62.10:0,62,663	0/0:7,0:8:16.92:0,17,115	0/1:17,1:16:8.11:8,0,19	0/0:21,0:21:21.91:0,22,139	1/1:10,15:25:39.01:368,39,0	0/0:24,0:24:47.58:0,48,350	0/0:24,1:27:31.42:0,31,370	1/1:14,16:30:36.04:342,36,0	0/0:19,0:19:44.68:0,45,326	0/0:26,0:26:62.59:0,63,458	0/0:14,0:15:15.12:0,15,184	0/0:21,1:24:28.19:0,28,312	0/0:19,1:20:36.60:0,37,264	0/0:18,0:18:29.71:0,30,217	1/1:6,20:27:25.25:400,25,0	0/0:22,0:22:51.62:0,52,349	0/0:27,0:28:67.58:0,68,484	0/0:20,0:20:35.59:0,36,254	1/1:10,13:24:35.82:316,36,0	1/1:6,23:30:19.59:485,20,0	1/1:2,16:18:19.23:331,19,0	0/1:5,15:21:4.93:262,0,5	0/0:15,0:15:23.66:0,24,166	0/0:19,0:22:42.82:0,43,296	0/0:24,0:26:56.01:0,56,395	1/1:20,9:30:48.33:427,48,0	1/1:3,20:23:51.08:496,51,0	0/1:3,4:8:7.05:87,0,7
chr10	104080787	.	T	TCTCC	1862.19	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-6.349;DP=428;FS=4.747;HRun=0;HaplotypeScore=70.9957;InbreedingCoeff=0.8553;MQ=62.03;MQ0=4;MQRankSum=-0.332;QD=17.91;ReadPosRankSum=-2.702;VQSLOD=2.2957;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:51.07:0,51,687	0/0:3,0:3:5.97:0,6,68	0/1:23,0:12:8.05:8,0,129	0/0:24,0:16:13.06:0,13,246	0/0:8,0:8:15.05:0,15,247	0/0:21,0:21:33.10:0,33,511	0/0:21,0:21:45.11:0,45,685	1/1:10,5:15:15.05:259,15,0	0/0:10,0:10:24.08:0,24,396	0/0:10,0:10:24.08:0,24,385	0/0:10,0:10:24.08:0,24,392	0/0:13,0:13:33.10:0,33,520	0/0:15,0:15:39.12:0,39,615	0/0:19,0:19:33.11:0,33,545	0/0:16,0:16:45.14:0,45,718	0/0:12,0:12:27.09:0,27,446	0/0:19,0:19:45.12:0,45,737	0/0:16,0:16:36.12:0,36,594	1/1:3,7:11:22.29:331,22,0	1/1:5,8:14:21:409,21,0	1/1:13,14:27:27.09:661,27,0	0/0:11,0:11:15.05:0,15,244	0/0:13,0:13:21.07:0,21,338	0/0:14,0:14:27.05:0,27,416	0/0:14,0:14:30.07:0,30,426	0/0:11,0:11:21.07:0,21,346	1/1:6,7:13:15.05:368,15,0	0/0:14,0:14:21.96:0,22,348
chr10	104081869	.	CCAGA	C	2604.63	PASS	AB=0.779;AC=20;AF=0.357;AN=56;BaseQRankSum=11.229;DP=612;FS=6.288;HRun=0;HaplotypeScore=116.8254;InbreedingCoeff=0.7453;MQ=68.86;MQ0=13;MQRankSum=-1.330;QD=11.63;ReadPosRankSum=-0.442;VQSLOD=2.2060;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:86.44:0,86,2551	0/0:8,0:8:21.07:0,21,488	0/0:33,0:17:7.58:0,8,144	0/0:29,0:23:9.88:0,10,272	1/1:9,12:21:24.08:381,24,0	0/0:13,0:13:21.07:0,21,502	0/0:30,0:30:12.57:0,13,1299	1/1:17,0:21:6.35:44,6,0	0/0:19,1:20:0.53:0,1,1019	0/0:16,0:16:18.06:0,18,430	0/0:18,0:18:39.12:0,39,873	0/0:23,0:23:48.16:0,48,1139	0/0:23,0:23:48.16:0,48,1134	0/1:22,1:23:2.47:2,0,919	1/1:3,15:18:36.12:572,36,0	0/0:12,1:12:24.08:0,24,573	0/0:33,0:33:66.20:0,66,1502	0/0:25,0:25:48.16:0,48,1146	1/1:19,0:21:11.81:97,12,0	1/1:4,0:15:15.02:140,15,0	1/1:18,0:28:3:28,3,0	1/1:6,10:16:20.49:332,20,0	0/0:13,0:13:27.09:0,27,645	0/0:33,0:33:78.25:0,78,1734	0/0:11,0:11:6.02:0,6,143	0/1:8,16:24:20.88:614,0,21	1/1:5,0:20:33.04:307,33,0	1/1:9,6:15:18:286,18,0
chr10	104082219	.	CGT	C	179.92	PASS	AB=0.850;AC=12;AF=0.250;AN=48;BaseQRankSum=3.455;DP=312;FS=13.239;HRun=0;HaplotypeScore=40.8972;InbreedingCoeff=-0.0353;MQ=62.20;MQ0=6;MQRankSum=0.115;QD=1.46;ReadPosRankSum=0.576;VQSLOD=-0.7342;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,1:25:32.19:32,0,303	0/0:7,0:8:9.01:0,9,100	./.	./.	0/0:4,0:4:9.03:0,9,133	0/0:16,0:16:7.11:0,7,227	0/0:11,0:11:5.92:0,6,48	./.	0/1:4,0:5:8.11:8,0,18	0/0:10,0:10:9.02:0,9,102	0/0:16,0:16:18.02:0,18,219	0/0:13,0:13:12.03:0,12,159	./.	0/0:5,0:5:9.03:0,9,132	0/0:5,0:5:3.01:0,3,45	0/0:7,0:7:15.02:0,15,184	0/1:18,0:19:12.95:13,0,256	0/0:18,0:17:23.99:0,24,288	1/1:5,0:6:5.85:44,6,0	0/1:2,5:7:26.79:27,0,37	0/1:14,0:14:20.20:26,0,20	0/1:4,2:6:26.83:27,0,39	0/0:2,0:2:3.01:0,3,45	0/1:15,3:18:11.77:12,0,227	0/0:11,0:11:2.98:0,3,21	0/1:11,2:13:17.86:18,0,126	1/1:6,2:9:11.87:112,12,0	0/0:7,0:7:5.99:0,6,67
chr10	104082293	.	CAT	C	852.57	PASS	AB=0.731;AC=16;AF=0.500;AN=32;BaseQRankSum=1.791;DP=214;FS=0.000;HRun=0;HaplotypeScore=44.1711;InbreedingCoeff=0.4446;MQ=72.22;MQ0=4;MQRankSum=2.697;QD=8.53;ReadPosRankSum=3.497;VQSLOD=2.8713;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,3:19:47.08:47,0,76	./.	./.	0/0:34,0:13:5.97:0,6,61	./.	1/1:6,3:10:6.32:50,6,0	./.	0/0:18,0:18:28.30:0,28,326	./.	1/1:5,0:5:3.01:34,3,0	1/1:7,0:7:2.97:21,3,0	1/1:1,4:6:11.51:117,12,0	./.	1/1:3,3:6:6.02:69,6,0	0/0:2,0:2:3:0,3,26	./.	1/1:9,10:22:38.23:343,38,0	0/1:7,8:16:13.66:249,0,14	./.	./.	./.	./.	./.	0/0:5,0:5:3.01:0,3,46	1/1:4,0:7:8.68:53,9,0	0/0:8,0:7:9.03:0,9,116	0/0:4,0:5:5.97:0,6,46	0/0:4,0:7:12.01:0,12,123
chr10	104082346	.	CTG	C	1669.53	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.319;DP=374;FS=2.409;HRun=0;HaplotypeScore=68.5240;InbreedingCoeff=0.9701;MQ=72.85;MQ0=3;MQRankSum=-0.987;QD=25.69;ReadPosRankSum=1.183;VQSLOD=4.3901;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,1:18:36.04:0,36,566	0/0:6,0:6:18.06:0,18,299	0/0:27,0:23:42.80:0,43,534	0/0:25,0:18:29.42:0,29,377	0/0:6,0:6:15.04:0,15,223	0/0:15,0:15:36.12:0,36,592	0/0:5,0:5:15.05:0,15,249	1/1:4,21:25:63.19:776,63,0	0/0:14,0:14:42.14:0,42,692	0/0:10,0:10:27.09:0,27,447	0/0:12,0:12:27.09:0,27,449	0/0:16,0:16:35.73:0,36,541	0/0:9,0:9:24.08:0,24,392	0/0:11,0:11:26.30:0,26,406	0/0:13,0:13:39.12:0,39,618	0/0:12,0:12:36.10:0,36,548	0/0:23,0:23:54.17:0,54,860	0/0:24,0:23:63.22:0,63,1040	1/1:4,4:7:15.04:176,15,0	1/1:1,7:8:12:151,12,0	1/1:0,7:7:18.06:227,18,0	0/0:7,0:7:18.06:0,18,299	0/0:7,0:7:15.05:0,15,249	0/0:13,0:13:33.09:0,33,519	0/0:10,0:10:24.07:0,24,373	0/0:13,0:13:33.11:0,33,546	1/1:1,15:16:42.08:510,42,0	0/0:11,0:11:27.06:0,27,419
chr10	104082646	.	ATG	A	10931.99	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=16.693;DP=1083;FS=1.117;HRun=0;HaplotypeScore=158.4239;InbreedingCoeff=0.9999;MQ=59.70;MQ0=5;MQRankSum=0.953;QD=29.07;ReadPosRankSum=3.209;VQSLOD=6.4781;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:89.78:0,90,1456	0/0:17,0:17:45.14:0,45,728	0/0:39,0:31:70.42:0,70,1015	0/0:52,0:35:82.34:0,82,1200	1/1:4,22:26:57.18:724,57,0	0/0:47,0:46:99:0,126,2096	0/0:47,0:47:99:0,120,1954	1/1:9,30:37:87.23:1066,87,0	0/0:49,0:49:99:0,132,2134	0/0:45,0:45:99:0,117,1907	0/0:18,0:18:42.14:0,42,706	0/0:47,0:47:99:0,123,2010	0/0:52,1:53:94.21:0,94,2080	0/0:57,0:57:99:0,153,2511	1/1:6,64:69:99:2200,172,0	0/0:62,0:62:99:0,178,2922	0/0:24,0:24:62.96:0,63,955	0/0:26,0:26:66.09:0,66,1077	1/1:4,23:27:69.17:843,69,0	1/1:3,19:21:51.17:653,51,0	1/1:11,75:86:99:2237,144,0	1/1:2,24:26:57:730,57,0	0/0:20,0:20:57.20:0,57,961	0/0:52,0:51:99:0,126,2073	0/0:14,0:14:32.91:0,33,556	1/1:5,36:41:99:1298,102,0	1/1:5,22:27:48.99:758,49,0	1/1:0,12:12:33.11:424,33,0
chr10	104083976	.	G	GGGGTGT	568.34	PASS	AB=0.875;AC=10;AF=0.179;AN=56;BaseQRankSum=7.602;DP=418;FS=2.151;HRun=0;HaplotypeScore=101.2497;InbreedingCoeff=0.7040;MQ=66.50;MQ0=5;MQRankSum=-0.989;QD=6.69;ReadPosRankSum=-3.545;VQSLOD=0.4033;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.26:0,81,1519	0/0:9,0:9:21.07:0,21,488	0/0:23,0:11:29.60:0,30,470	0/0:24,0:17:43.02:0,43,585	0/1:13,0:13:15.78:16,0,445	0/0:13,0:13:36.10:0,36,643	0/0:16,0:16:48.10:0,48,767	1/1:18,0:18:18.48:200,18,0	0/0:12,0:12:36.11:0,36,631	0/0:16,0:15:42.13:0,42,821	0/0:6,0:6:18.05:0,18,334	0/0:6,0:6:18.06:0,18,384	0/0:13,0:13:39.10:0,39,664	0/0:12,0:12:33.09:0,33,607	0/0:18,0:18:42.12:0,42,613	0/0:14,0:14:39.13:0,39,841	0/0:25,0:25:75.20:0,75,1432	0/0:23,0:23:66.22:0,66,1329	1/1:11,1:11:8.46:151,8,0	0/1:6,2:9:8.72:95,0,9	1/1:23,0:23:19.84:163,20,0	0/0:14,0:14:39.10:0,39,528	0/0:13,0:13:32.82:0,33,621	0/0:17,0:17:45.13:0,45,965	0/0:14,0:14:33.58:0,34,726	0/0:7,0:7:21.06:0,21,318	1/1:2,7:10:3.48:99,3,0	0/0:7,0:7:21:0,21,256
chr10	104083978	.	A	AGT	1025.99	PASS	AB=0.823;AC=20;AF=0.357;AN=56;BaseQRankSum=1.726;DP=448;FS=10.371;HRun=0;HaplotypeScore=79.4953;InbreedingCoeff=0.5365;MQ=65.48;MQ0=5;MQRankSum=-0.744;QD=5.90;ReadPosRankSum=-2.893;VQSLOD=1.2975;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:42.05:0,42,457	0/0:10,0:11:17.88:0,18,184	0/0:24,0:12:3.01:0,3,31	0/0:23,0:16:2.04:0,2,7	0/1:9,6:17:20.48:129,0,20	0/0:16,0:16:21.06:0,21,238	0/0:17,0:19:10.68:0,11,144	1/1:20,0:20:19.06:145,19,0	0/0:12,0:13:11.87:0,12,116	0/0:16,0:15:24.05:0,24,263	0/0:6,0:6:12.03:0,12,136	0/0:7,0:7:12.03:0,12,136	0/0:13,0:13:15.04:0,15,171	0/1:10,1:12:25.19:25,0,163	0/1:11,9:20:12.99:255,0,13	0/0:13,0:14:26.89:0,27,276	0/0:23,0:25:38.77:0,39,403	0/0:23,0:23:48.11:0,48,532	1/1:12,0:10:6:53,6,0	1/1:12,0:12:8.04:59,8,0	1/1:23,0:23:7.82:69,8,0	1/1:11,5:16:11.93:184,12,0	0/0:13,0:14:23.75:0,24,241	0/0:13,0:16:9.61:0,10,257	0/1:13,0:13:13.55:14,0,268	1/1:5,4:10:12:139,12,0	1/1:11,0:11:5.99:50,6,0	1/1:5,2:8:6.02:92,6,0
chr10	104084093	.	TG	T	188.51	PASS	AB=0.950;AC=10;AF=0.185;AN=54;BaseQRankSum=4.158;DP=153;FS=7.458;HRun=1;HaplotypeScore=24.6926;InbreedingCoeff=0.4325;MQ=97.72;MQ0=3;MQRankSum=-1.173;QD=6.50;ReadPosRankSum=-0.497;VQSLOD=-0.0153;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:36.07:0,36,519	0/0:2,0:2:6.02:0,6,96	0/0:7,0:6:9:0,9,117	0/1:16,2:13:27.22:27,0,108	0/0:2,0:2:5.82:0,6,33	0/0:9,0:9:20.81:0,21,231	0/0:3,0:3:9.03:0,9,143	1/1:0,6:6:12.04:166,12,0	0/0:5,0:5:12.01:0,12,143	0/0:4,0:4:12.04:0,12,175	0/0:3,0:3:5.69:0,6,58	0/0:5,0:5:15.03:0,15,208	0/0:3,0:3:9.02:0,9,121	0/0:1,0:1:2.98:0,3,21	0/1:1,0:1:0:0,0,0	0/0:5,0:5:15.05:0,15,236	0/0:17,0:16:41.77:0,42,459	0/0:8,0:8:17.97:0,18,209	1/1:0,1:1:3.01:41,3,0	1/1:0,1:1:3.01:41,3,0	./.	0/0:3,0:3:2.75:0,3,15	0/0:4,0:4:3.01:0,3,48	0/0:3,0:3:6.02:0,6,96	0/0:7,0:7:15.02:0,15,214	0/0:2,0:2:5.60:0,6,26	1/1:0,2:2:3.01:41,3,0	0/0:7,0:11:4.78:0,5,67
chr10	104084094	.	G	GAT	906.56	PASS	AB=0.816;AC=20;AF=0.625;AN=32;BaseQRankSum=-1.953;DP=157;FS=6.164;HRun=0;HaplotypeScore=24.9832;InbreedingCoeff=0.2910;MQ=94.54;MQ0=3;MQRankSum=0.567;QD=8.72;ReadPosRankSum=1.071;VQSLOD=1.6196;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:2.99:23,3,0	0/0:3,0:3:3.01:0,3,34	0/0:8,0:6:0:0,0,0	0/1:17,0:12:5.23:5,0,8	1/1:3,0:3:2.99:23,3,0	0/1:4,5:12:2.11:127,0,2	./.	./.	1/1:2,2:4:3.01:46,3,0	0/0:3,0:4:2.84:0,3,14	0/0:2,0:3:2.84:0,3,14	1/1:4,1:5:3.01:46,3,0	./.	1/1:0,1:1:3.01:46,3,0	./.	0/0:5,0:5:6.02:0,6,68	1/1:7,11:18:5.36:348,5,0	1/1:4,4:9:6.02:92,6,0	./.	./.	./.	./.	./.	./.	1/1:4,3:7:3.01:46,3,0	./.	./.	1/1:12,0:11:15.04:210,15,0
chr10	104084206	.	T	TA	2139.26	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-5.482;DP=354;FS=1.412;HRun=6;HaplotypeScore=40.5098;InbreedingCoeff=0.9206;MQ=69.88;MQ0=0;MQRankSum=-2.437;QD=27.78;ReadPosRankSum=-0.855;VQSLOD=3.3994;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.12:0,54,549	0/0:8,0:8:21.04:0,21,214	0/0:15,0:9:23.59:0,24,184	0/0:17,0:8:7.29:0,7,54	0/0:21,0:21:57.13:0,57,581	0/0:11,0:11:30.04:0,30,297	0/0:10,0:10:24.05:0,24,245	1/1:3,12:14:27.03:304,27,0	0/0:7,0:7:14.82:0,15,135	0/0:13,0:13:27.06:0,27,275	0/0:6,0:6:18.04:0,18,183	0/0:19,0:19:57.13:0,57,581	0/0:9,0:9:27.05:0,27,268	0/0:8,0:8:24.05:0,24,245	0/0:9,0:9:27.06:0,27,274	0/0:7,0:7:21.05:0,21,214	0/0:20,0:20:54.10:0,54,538	0/0:21,0:21:56.37:0,56,605	1/1:3,16:19:48.11:567,48,0	1/1:0,17:17:48.15:600,48,0	1/1:0,6:6:15.05:188,15,0	0/0:8,0:8:18.03:0,18,178	0/0:17,0:17:51.10:0,51,513	0/0:4,0:4:12:0,12,109	0/0:18,0:18:51.11:0,51,519	0/0:10,0:10:24.05:0,24,244	1/1:0,20:20:54.09:653,54,0	0/0:1,0:1:3.01:0,3,31
chr10	104086409	.	TTG	T	231.12	PASS	AB=0.922;AC=9;AF=0.167;AN=54;BaseQRankSum=1.726;DP=674;FS=1.112;HRun=0;HaplotypeScore=95.5613;InbreedingCoeff=0.0466;MQ=55.96;MQ0=30;MQRankSum=1.440;QD=1.26;ReadPosRankSum=0.917;VQSLOD=1.6622;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:21.05:0,21,274	0/0:11,0:11:9.02:0,9,114	./.	0/0:40,0:17:0:0,0,0	0/0:17,0:16:10.62:0,11,92	0/1:16,0:15:13:13,0,101	0/0:21,0:21:12.90:0,13,156	0/0:27,0:23:1.82:0,2,5	0/0:29,0:28:12.49:0,12,152	0/0:23,0:23:23.16:0,23,261	0/1:10,0:10:1.74:2,0,35	0/0:27,0:27:15.04:0,15,201	0/1:29,1:29:34.24:34,0,178	0/1:16,2:19:23.48:23,0,77	0/0:28,0:27:6.01:0,6,68	0/0:17,0:17:17.96:0,18,211	0/0:25,0:24:21.54:0,22,311	0/0:21,0:22:20.99:0,21,264	1/1:22,2:23:3.01:33,3,0	0/1:16,2:17:35.24:56,0,35	0/1:47,2:48:7.91:112,0,8	0/0:24,0:24:5.45:0,5,47	0/0:15,0:15:24:0,24,257	0/0:37,3:40:12.56:0,13,492	0/0:22,3:25:20.88:0,21,308	0/0:21,0:21:13.40:0,13,164	0/1:11,7:17:10.94:85,0,11	0/0:14,0:11:6.01:0,6,65
chr10	104089429	.	G	GA	3139.97	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-11.276;DP=682;FS=9.525;HRun=9;HaplotypeScore=70.7894;InbreedingCoeff=0.9870;MQ=77.49;MQ0=0;MQRankSum=-0.818;QD=24.72;ReadPosRankSum=-3.086;VQSLOD=2.9097;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:83.97:0,84,729	0/0:13,0:13:32.97:0,33,282	0/0:23,0:22:19.27:0,19,138	0/0:19,1:17:29.82:0,30,255	0/0:29,2:31:14.60:0,15,585	0/0:31,1:33:52.84:0,53,676	0/0:32,3:35:17.55:0,18,598	1/1:3,23:26:46.24:711,46,0	0/0:21,0:21:47.97:0,48,413	0/0:29,0:29:77.47:0,77,660	0/0:21,0:21:53.99:0,54,468	0/0:18,1:19:14.78:0,15,351	0/0:14,0:14:32.99:0,33,286	0/0:20,0:20:22.70:0,23,362	0/0:26,0:26:62.94:0,63,543	0/0:12,0:12:29.98:0,30,260	0/0:19,0:19:50.95:0,51,437	0/0:19,0:19:47.99:0,48,417	1/1:1,16:17:45.09:480,45,0	1/1:5,27:32:75.20:830,75,0	1/1:3,17:20:51.61:564,52,0	0/0:25,0:25:71.99:0,72,625	0/0:25,1:26:23.76:0,24,435	0/0:20,0:20:53.93:0,54,458	0/0:39,0:39:99:0,105,910	0/0:34,0:34:99:0,102,876	1/1:2,29:32:42.19:730,42,0	0/0:22,0:22:53.98:0,54,468
chr10	104089649	.	A	AG	5179.89	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.761;DP=676;FS=11.593;HRun=2;HaplotypeScore=78.4551;InbreedingCoeff=0.9996;MQ=81.17;MQ0=0;MQRankSum=-0.782;QD=35.48;ReadPosRankSum=-1.799;VQSLOD=3.6264;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,1547	0/0:11,0:11:33.09:0,33,397	0/0:20,0:20:51.05:0,51,590	0/0:14,0:14:27.44:0,27,301	0/0:17,0:17:51.14:0,51,618	0/0:26,0:25:75.21:0,75,903	0/0:30,0:30:90.28:0,90,1116	1/1:6,21:28:63.17:883,63,0	0/0:32,0:32:93.27:0,93,1128	0/0:21,0:21:63.18:0,63,762	0/0:13,0:13:39.12:0,39,484	0/0:26,0:26:78.25:0,78,967	0/0:18,0:18:54.17:0,54,669	0/0:28,0:28:78.23:0,78,954	0/0:29,0:29:84.23:0,84,1004	0/0:21,0:21:63.20:0,63,781	0/0:32,0:32:90.28:0,90,1116	0/0:30,0:30:87.20:0,87,1044	1/1:0,16:16:48.16:691,48,0	1/1:3,21:24:54.14:754,54,0	1/1:3,59:62:99:2289,160,0	0/0:18,0:18:54.17:0,54,669	0/0:19,0:19:48.15:0,48,595	0/0:32,0:32:90.28:0,90,1116	0/0:14,0:14:39.12:0,39,484	0/0:24,0:24:69.22:0,69,856	1/1:1,15:15:39.13:562,39,0	0/0:10,0:10:30.09:0,30,372
chr10	104089921	.	G	GA	5093.72	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-11.289;DP=734;FS=0.000;HRun=1;HaplotypeScore=71.7063;InbreedingCoeff=0.9679;MQ=73.07;MQ0=0;MQRankSum=-1.132;QD=38.88;ReadPosRankSum=-0.715;VQSLOD=4.9904;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1465	0/0:11,0:11:30.10:0,30,389	0/0:12,0:13:4.62:0,5,208	0/0:13,0:13:19.59:0,20,265	0/0:28,0:28:84.27:0,84,1090	0/0:23,0:23:66.21:0,66,857	0/0:29,0:29:81.25:0,81,1036	1/1:3,24:27:66.22:988,66,0	0/0:25,0:25:69.21:0,69,881	0/0:33,0:33:96.30:0,96,1223	0/0:14,0:14:42.14:0,42,545	0/0:23,0:23:66.20:0,66,843	0/0:29,0:29:87.24:0,87,1085	0/0:28,0:28:84.27:0,84,1090	0/0:38,0:38:99:0,111,1427	0/0:22,0:22:66.20:0,66,843	0/0:43,0:43:99:0,126,1619	0/0:37,0:37:99:0,111,1441	1/1:3,19:23:66.13:917,66,0	1/1:1,17:18:51.17:764,51,0	1/1:0,32:32:81.27:1212,81,0	0/0:22,0:22:63.18:0,63,790	0/0:18,0:18:48.13:0,48,606	0/0:48,0:48:99:0,141,1815	0/0:23,0:23:66.20:0,66,844	0/0:32,0:32:93.27:0,93,1180	1/1:0,31:31:81:1212,81,0	0/0:12,0:12:36.07:0,36,435
chr10	104090180	.	GCTAGCCTGGACTA	G	8315.50	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.085;DP=643;FS=2.152;HRun=0;HaplotypeScore=242.9363;InbreedingCoeff=0.9969;MQ=83.84;MQ0=0;MQRankSum=-12.841;QD=94.49;ReadPosRankSum=0.172;VQSLOD=4.3096;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:93.17:0,93,4603	0/0:16,0:16:40.61:0,41,2561	0/0:31,0:31:93.32:0,93,4696	0/0:32,0:32:77.54:0,78,4289	0/0:19,0:19:54.16:0,54,3215	0/0:24,0:24:63.21:0,63,3498	0/0:32,0:32:96.33:0,96,6022	1/1:6,13:19:42.14:1623,42,0	0/0:16,0:16:45.15:0,45,2654	0/0:23,0:23:66.19:0,66,3603	0/0:10,0:10:20.49:0,20,1015	0/0:26,0:26:78.27:0,78,4915	0/0:22,0:22:63.19:0,63,3667	0/0:28,0:28:84.29:0,84,5417	0/0:19,0:19:57.18:0,57,3273	0/0:25,0:25:75.24:0,75,4521	0/0:31,0:31:93.32:0,93,5992	0/0:21,0:21:63.22:0,63,4216	1/1:4,13:17:36.12:1472,36,0	1/1:2,18:20:54.19:2171,54,0	1/1:3,6:9:18.06:662,18,0	0/0:21,0:21:51.17:0,51,2516	0/0:15,0:15:41.96:0,42,2122	0/0:54,0:54:99:0,163,9620	0/0:14,0:14:36.12:0,36,1954	0/0:21,0:21:51.16:0,51,2932	1/1:6,17:23:66.17:2387,66,0	0/0:14,0:14:42.09:0,42,1466
chr10	104090212	.	GA	G	2343.83	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.538;DP=640;FS=4.989;HRun=9;HaplotypeScore=102.1267;InbreedingCoeff=0.9964;MQ=78.51;MQ0=0;MQRankSum=-8.434;QD=20.21;ReadPosRankSum=-0.516;VQSLOD=3.4029;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:86.99:0,87,941	0/0:10,0:10:30.09:0,30,346	0/0:25,0:25:57.75:0,58,607	0/0:27,0:25:49.72:0,50,511	0/0:23,0:23:66.17:0,66,741	0/0:20,0:20:49.38:0,49,546	0/0:21,0:21:45.11:0,45,497	1/1:3,28:31:81.01:737,81,0	0/0:19,0:19:48.14:0,48,554	0/0:27,0:27:78.18:0,78,855	0/0:6,0:6:18.05:0,18,208	0/0:29,1:30:62.77:0,63,948	0/0:23,0:24:63.02:0,63,676	0/0:29,0:29:81.20:0,81,904	0/0:18,0:18:48.14:0,48,554	0/0:23,0:24:72.03:0,72,801	0/0:33,0:33:96.25:0,96,1086	0/0:27,0:27:75.21:0,75,855	1/1:4,14:18:42:379,42,0	1/1:6,22:28:34.02:526,34,0	1/1:2,8:10:21.01:192,21,0	0/0:13,0:13:33.96:0,34,364	0/0:15,0:15:39.12:0,39,449	0/0:47,0:47:99:0,135,1558	0/0:19,0:19:57.09:0,57,620	0/0:26,0:26:78.22:0,78,892	1/1:4,25:28:75.04:685,75,0	0/0:8,0:8:24.07:0,24,277
chr10	104092918	.	G	GAGGGA	1087.71	PASS	AB=0.989;AC=20;AF=0.370;AN=54;BaseQRankSum=4.538;DP=583;FS=4.890;HRun=0;HaplotypeScore=118.9822;InbreedingCoeff=0.0769;MQ=56.15;MQ0=19;MQRankSum=-4.316;QD=3.67;ReadPosRankSum=-4.091;VQSLOD=0.6446;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:18.04:0,18,290	0/1:13,0:12:9.67:10,0,70	0/1:60,0:17:9.69:10,0,159	0/0:80,0:29:16.31:0,16,213	1/1:17,0:16:14.41:112,14,0	0/1:15,0:15:16.22:16,0,241	0/1:31,0:31:15.24:15,0,573	0/0:22,0:22:8.07:0,8,131	0/0:5,0:6:12.04:0,12,227	0/1:20,0:20:33.52:34,0,123	0/1:18,0:17:32.29:32,0,95	0/0:23,0:23:10.85:0,11,175	./.	0/1:15,0:15:23.79:24,0,265	1/1:7,6:13:3.25:196,3,0	0/1:12,0:12:3.78:4,0,201	0/0:31,0:31:42.12:0,42,794	0/0:16,0:14:9.01:0,9,170	0/0:15,0:16:0.19:0,0,178	0/0:17,0:16:14.66:0,15,279	0/0:17,0:16:9.03:0,9,148	1/1:13,2:13:18.45:323,18,0	0/1:10,0:10:16.34:16,0,104	0/0:20,0:19:6.02:0,6,113	0/1:21,0:18:14.83:15,0,37	1/1:23,0:22:27.28:362,27,0	0/0:4,0:4:3.01:0,3,57	1/1:7,1:9:3.01:87,3,0
chr10	104092938	.	AG	A	1439.58	PASS	AB=0.824;AC=20;AF=0.357;AN=56;BaseQRankSum=5.238;DP=435;FS=2.822;HRun=3;HaplotypeScore=52.5289;InbreedingCoeff=-0.1225;MQ=60.31;MQ0=24;MQRankSum=-3.224;QD=7.46;ReadPosRankSum=-0.805;VQSLOD=0.5221;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:14:22.66:0,23,325	0/1:6,1:5:35.09:35,0,104	0/0:54,0:17:31.54:0,32,419	0/0:69,2:22:17:0,17,294	1/1:6,6:10:17.24:183,17,0	0/1:12,2:14:50.63:51,0,350	0/1:12,5:17:41.70:42,0,530	0/0:21,0:19:47.55:0,48,608	0/0:7,0:6:12.04:0,12,191	0/1:11,2:12:55.06:55,0,244	0/1:13,2:13:62.13:62,0,167	0/1:13,3:15:64.32:64,0,264	1/1:2,2:2:3.01:42,3,0	0/1:8,1:9:62.21:62,0,218	0/1:7,2:8:1.45:39,0,1	0/1:6,4:10:99:155,0,172	0/0:18,3:21:3.19:0,3,629	0/0:5,0:5:9.03:0,9,144	0/0:11,0:9:26.98:0,27,352	0/1:10,5:15:99:144,0,335	0/0:20,0:18:34.34:0,34,565	0/1:8,4:12:59.46:156,0,59	0/1:5,1:6:39.50:40,0,83	0/0:7,0:6:6.02:0,6,96	0/1:14,2:14:1.50:1,0,276	1/1:1,14:15:30.29:437,30,0	0/1:2,1:3:36.61:37,0,42	0/0:7,0:4:1.13:0,1,89
chr10	104092969	.	AG	A	2001.41	PASS	AB=0.721;AC=29;AF=0.518;AN=56;BaseQRankSum=1.233;DP=295;FS=14.549;HRun=3;HaplotypeScore=40.7050;InbreedingCoeff=-0.3867;MQ=63.07;MQ0=14;MQRankSum=-3.841;QD=8.63;ReadPosRankSum=1.745;VQSLOD=-0.4127;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,4:12:6.67:0,7,133	0/1:3,1:4:35.54:36,0,42	0/0:31,1:12:7.31:0,7,169	0/1:38,3:12:10.14:10,0,86	0/0:3,1:3:6.02:0,6,92	0/0:4,0:4:3.01:0,3,46	0/1:10,3:12:17.81:18,0,266	0/1:10,5:15:99:108,0,162	0/1:2,8:10:51.62:159,0,52	0/1:5,7:11:83.14:194,0,83	0/1:4,5:7:58.47:58,0,68	0/1:5,5:9:29.72:165,0,30	1/1:1,1:1:3.01:42,3,0	0/1:5,3:8:69.76:70,0,122	1/1:3,2:4:6.02:82,6,0	1/1:1,5:6:15.05:211,15,0	0/1:6,2:7:24.33:24,0,43	0/1:5,1:6:32.89:33,0,83	0/1:9,7:12:99:244,0,121	0/1:2,8:10:59.33:125,0,59	0/1:9,6:12:61.65:62,0,163	0/0:7,1:8:2:0,2,111	1/1:2,4:6:3.01:42,3,0	1/1:3,2:3:1.78:6,2,0	0/1:2,4:4:36.21:36,0,42	0/1:6,2:8:64.94:65,0,132	1/1:0,7:6:17.79:223,18,0	0/1:6,4:9:99:145,0,129
chr10	104092995	.	AC	A	105.39	PASS	AB=1.000;AC=13;AF=0.722;AN=18;BaseQRankSum=-2.165;DP=34;FS=12.041;HRun=1;HaplotypeScore=27.5630;MQ=152.64;MQ0=0;MQRankSum=-2.839;QD=9.58;ReadPosRankSum=0.241;VQSLOD=-0.4594;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:7,0:6:8.05:0,8,58	0/0:11,0:9:9.49:0,9,104	./.	./.	./.	./.	./.	1/1:1,0:1:2.96:19,3,0	0/1:2,0:2:0:0,0,0	./.	./.	./.	./.	1/1:0,1:1:2.88:15,3,0	./.	1/1:0,1:1:3:27,3,0	./.	1/1:0,1:1:2.97:20,3,0	./.	./.	./.	./.	./.	1/1:0,2:2:6.02:78,6,0	./.	1/1:1,2:2:5.88:36,6,0
chr10	104094720	.	TAG	T	217.52	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=9.714;DP=525;FS=1.320;HRun=0;HaplotypeScore=85.1151;InbreedingCoeff=0.7733;MQ=83.47;MQ0=0;MQRankSum=-0.145;QD=2.36;ReadPosRankSum=0.870;VQSLOD=1.6847;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,2470	0/0:8,0:8:24.08:0,24,434	0/0:18,0:18:51.06:0,51,923	0/0:18,0:18:44.82:0,45,770	0/0:18,0:18:54.19:0,54,983	0/0:19,0:19:57.20:0,57,1045	0/0:22,0:22:66.23:0,66,1210	1/1:19,2:21:0.77:96,1,0	0/0:14,0:14:42.14:0,42,770	0/0:15,0:15:42.14:0,42,770	0/0:12,0:12:36.10:0,36,627	0/0:27,0:27:75.26:0,75,1369	0/0:18,0:18:54.19:0,54,990	0/0:18,0:18:54.19:0,54,990	0/0:16,0:16:42.14:0,42,770	0/0:10,0:10:27.09:0,27,495	0/0:37,0:36:99:0,102,1827	0/0:17,0:17:48.16:0,48,880	1/1:14,0:14:6.03:60,6,0	1/1:10,1:11:7.73:57,8,0	1/1:29,1:30:34.84:137,35,0	0/0:19,0:19:54.18:0,54,970	0/0:6,0:6:18.06:0,18,330	0/0:23,0:23:69.24:0,69,1250	0/0:21,0:21:60.21:0,60,1092	0/0:20,0:20:57.19:0,57,998	0/1:16,0:16:6.60:7,0,10	0/0:10,0:10:30.10:0,30,550
chr10	104094723	.	A	ACCT	5311.56	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.010;DP=522;FS=4.099;HRun=0;HaplotypeScore=79.5542;InbreedingCoeff=0.9964;MQ=83.22;MQ0=0;MQRankSum=-6.453;QD=59.02;ReadPosRankSum=-0.270;VQSLOD=6.5630;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,2536	0/0:8,0:8:24.08:0,24,447	0/0:18,0:18:51.03:0,51,937	0/0:18,0:18:48.14:0,48,840	0/0:18,0:18:54.19:0,54,999	0/0:20,0:20:60.19:0,60,1087	0/0:22,0:22:66.23:0,66,1231	1/1:4,17:21:60.19:1294,60,0	0/0:14,0:14:42.14:0,42,780	0/0:16,0:16:42.14:0,42,780	0/0:12,0:12:36.10:0,36,638	0/0:25,0:25:75.26:0,75,1387	0/0:18,0:18:54.19:0,54,1003	0/0:18,0:18:54.19:0,54,1007	0/0:15,0:15:45.14:0,45,808	0/0:9,0:9:27.09:0,27,503	0/0:35,0:34:99:0,102,1856	0/0:19,0:19:54.10:0,54,935	1/1:2,12:14:39.13:883,39,0	1/1:1,10:11:21.07:469,21,0	1/1:2,27:29:75.26:1755,75,0	0/0:18,0:18:54.19:0,54,1005	0/0:6,0:6:18.06:0,18,336	0/0:24,0:24:69.24:0,69,1283	0/0:21,0:21:63.19:0,63,1137	0/0:19,0:19:57.19:0,57,1015	1/1:0,14:15:39.13:911,39,0	0/0:13,0:13:39.12:0,39,679
chr10	104095017	.	T	TC	2865.35	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.630;DP=613;FS=0.460;HRun=4;HaplotypeScore=62.1642;InbreedingCoeff=0.9989;MQ=90.96;MQ0=0;MQRankSum=-10.689;QD=31.84;ReadPosRankSum=-2.870;VQSLOD=2.7502;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1215	0/0:12,0:12:30.09:0,30,340	0/0:28,0:28:83.64:0,84,881	0/0:25,0:25:66.16:0,66,730	0/0:23,0:23:69.18:0,69,767	0/0:22,0:22:63.15:0,63,701	0/0:18,0:18:54.14:0,54,602	1/1:4,21:25:63.17:824,63,0	0/0:21,0:21:63.16:0,63,704	0/0:31,0:31:87.23:0,87,966	0/0:16,0:16:48.12:0,48,535	0/0:26,0:26:72.20:0,72,816	0/0:15,0:15:36.10:0,36,408	0/0:25,0:25:69.18:0,69,774	0/0:20,0:20:57.16:0,57,647	0/0:18,0:18:51.15:0,51,578	0/0:42,0:42:99:0,126,1428	0/0:28,0:28:78.22:0,78,884	1/1:1,7:8:21.07:285,21,0	1/1:3,16:19:42.10:547,42,0	1/1:1,20:21:51.17:696,51,0	0/0:15,0:15:45.13:0,45,510	0/0:25,0:25:69.20:0,69,781	0/0:25,0:25:72.19:0,72,805	0/0:14,0:14:39.11:0,39,442	0/0:22,0:22:66.18:0,66,741	1/1:0,17:17:51.17:689,51,0	0/0:15,0:15:45.10:0,45,496
chr10	104095168	.	C	CACAGCCTCG	11498.78	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-2.877;DP=770;FS=5.028;HRun=0;HaplotypeScore=204.7794;InbreedingCoeff=0.9996;MQ=85.61;MQ0=0;MQRankSum=-13.193;QD=82.73;ReadPosRankSum=-4.261;VQSLOD=3.3621;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,3887	0/0:13,0:13:36.09:0,36,954	0/0:30,0:30:74.13:0,74,1954	0/0:25,0:26:57.67:0,58,1616	0/0:14,0:14:39.13:0,39,1195	0/0:19,0:19:51.16:0,51,1425	0/0:20,0:20:60.19:0,60,1668	1/1:23,22:51:99:5333,144,0	0/0:27,0:27:81.21:0,81,2072	0/0:37,0:37:99:0,105,3078	0/0:14,0:14:36.11:0,36,986	0/0:30,0:30:84.26:0,84,2370	0/0:31,0:31:84.27:0,84,2494	0/0:31,0:31:90.28:0,90,2516	0/0:42,0:42:99:0,120,3482	0/0:34,0:34:93.28:0,93,2598	0/0:34,0:34:99:0,99,2786	0/0:19,0:19:54.19:0,54,1502	1/1:8,8:16:42.13:1664,42,0	1/1:2,13:16:27.09:1305,27,0	1/1:11,16:33:30.10:1374,30,0	0/0:24,0:24:72.25:0,72,2149	0/0:23,0:23:57.20:0,57,1621	0/0:48,0:48:99:0,138,4133	0/0:18,0:18:50.84:0,51,1474	0/0:34,0:34:99:0,102,3078	1/1:4,15:22:45.15:1823,45,0	0/0:17,0:17:51.15:0,51,1493
chr10	104095369	.	GTA	G	463.59	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.372;DP=850;FS=11.883;HRun=0;HaplotypeScore=109.4510;InbreedingCoeff=0.8879;MQ=62.06;MQ0=1;MQRankSum=-4.745;QD=12.53;ReadPosRankSum=-4.691;VQSLOD=1.4536;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,2378	0/0:11,0:11:33.11:0,33,637	0/0:14,0:9:11.88:0,12,180	0/0:13,0:9:20.11:0,20,229	0/0:33,0:33:90.29:0,90,1683	0/0:21,0:21:60.17:0,60,1102	0/0:29,0:29:84.27:0,84,1561	1/1:5,0:2:6:54,6,0	0/0:59,0:59:99:0,178,3308	0/0:47,0:47:99:0,138,2528	0/0:22,0:22:63.12:0,63,1131	0/0:57,0:57:99:0,169,3164	0/0:41,0:41:99:0,123,2375	0/0:45,0:45:99:0,135,2574	0/0:67,0:67:99:0,199,3739	0/0:62,0:62:99:0,187,3498	0/0:19,0:19:51.17:0,51,984	0/0:21,0:21:63.22:0,63,1203	1/1:1,0:1:3:26,3,0	1/1:1,1:2:6:52,6,0	1/1:8,16:24:47.78:395,48,0	0/0:41,0:41:99:0,120,2266	0/0:28,0:28:81.26:0,81,1487	0/0:47,0:47:99:0,138,2576	0/0:28,0:28:71.96:0,72,1346	0/0:45,0:45:99:0,135,2554	1/1:2,3:5:11.87:89,12,0	0/0:19,0:18:57.17:0,57,1065
chr10	104095376	.	TA	T	76.74	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=6.177;DP=858;FS=4.402;HRun=1;HaplotypeScore=97.0489;InbreedingCoeff=0.8494;MQ=60.94;MQ0=1;MQRankSum=-5.205;QD=3.84;ReadPosRankSum=-2.679;VQSLOD=-0.6254;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,2097	0/0:11,0:11:33.06:0,33,455	0/0:17,0:11:14.72:0,15,197	0/0:15,0:9:16.90:0,17,262	0/0:33,0:33:90.29:0,90,1408	0/0:20,0:20:60.19:0,60,936	0/0:31,0:31:90.29:0,90,1399	./.	0/0:60,0:60:99:0,181,2770	0/0:49,0:49:99:0,141,2233	0/0:19,0:19:54.18:0,54,863	0/0:60,0:60:99:0,175,2756	0/0:45,0:45:99:0,135,2097	0/0:50,0:50:99:0,148,2329	0/0:67,0:67:99:0,202,3167	0/0:59,0:59:99:0,178,2706	0/0:22,0:22:63.17:0,63,956	0/0:22,0:22:66.23:0,66,1055	./.	1/1:0,1:1:2.92:17,3,0	1/1:1,15:16:26.76:157,27,0	0/0:40,0:40:99:0,120,1894	0/0:25,0:25:75.13:0,75,1088	0/0:45,0:46:99:0,135,2131	0/0:28,0:28:75.26:0,75,1199	0/0:49,0:49:99:0,147,2248	1/1:0,3:3:2.97:20,3,0	0/0:21,0:20:63.21:0,63,997
chr10	104095418	.	TGC	T	191.98	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=7.238;DP=865;FS=9.167;HRun=0;HaplotypeScore=121.9047;InbreedingCoeff=0.8741;MQ=64.88;MQ0=1;MQRankSum=-5.633;QD=9.60;ReadPosRankSum=-4.894;VQSLOD=1.6843;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,2388	0/0:10,0:10:30.10:0,30,609	0/0:24,0:16:25.11:0,25,512	0/0:25,0:17:28.81:0,29,524	0/0:33,0:33:96.29:0,96,1860	0/0:19,0:19:57.20:0,57,1134	0/0:35,0:35:99:0,102,1964	./.	0/0:55,0:55:99:0,166,3193	0/0:58,0:58:99:0,172,3413	0/0:14,0:14:36.12:0,36,720	0/0:61,0:61:99:0,181,3515	0/0:45,0:45:99:0,135,2706	0/0:56,0:56:99:0,169,3389	0/0:72,0:72:99:0,217,4244	0/0:51,0:51:99:0,154,3037	0/0:17,0:17:51.17:0,51,1021	0/0:19,0:19:57.20:0,57,1136	1/1:0,3:3:9.03:144,9,0	1/1:0,1:1:2.97:20,3,0	1/1:2,13:15:25.97:143,26,0	0/0:31,0:31:93.31:0,93,1830	0/0:21,0:21:60.17:0,60,1145	0/0:47,0:47:99:0,135,2504	0/0:27,0:27:81.23:0,81,1557	0/0:51,0:51:99:0,151,3003	1/1:0,1:1:2.97:20,3,0	0/0:31,0:30:93.32:0,93,1822
chr10	104095425	.	GTA	G	514.12	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=7.400;DP=870;FS=12.113;HRun=0;HaplotypeScore=124.0431;InbreedingCoeff=0.9116;MQ=65.88;MQ0=2;MQRankSum=-6.587;QD=19.04;ReadPosRankSum=-4.227;VQSLOD=1.9722;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,2267	0/0:11,0:11:33.11:0,33,637	0/0:27,0:19:44.80:0,45,654	0/0:24,0:17:28.92:0,29,579	0/0:33,0:33:96.33:0,96,1840	0/0:19,0:19:57.20:0,57,1090	0/0:35,0:35:96.28:0,96,1744	./.	0/0:52,0:52:99:0,157,2967	0/0:59,0:59:99:0,175,3356	0/0:17,0:17:45.13:0,45,794	0/0:59,0:59:99:0,175,3283	0/0:48,0:48:99:0,144,2679	0/0:58,0:58:99:0,175,3308	0/0:72,0:72:99:0,214,4076	0/0:50,0:50:99:0,141,2689	0/0:16,0:16:48.15:0,48,893	0/0:20,0:20:60.21:0,60,1156	1/1:0,5:5:15.05:207,15,0	1/1:0,3:3:3.01:41,3,0	1/1:0,17:17:31.12:343,31,0	0/0:32,0:32:93.31:0,93,1732	0/0:21,0:21:60.19:0,60,1125	0/0:41,0:41:99:0,114,2156	0/0:26,0:26:78.24:0,78,1440	0/0:51,0:51:99:0,147,2773	1/1:1,1:2:6.01:64,6,0	0/0:30,0:29:90.31:0,90,1737
chr10	104095577	.	ATG	A	5946.66	PASS	AB=0.935;AC=11;AF=0.196;AN=56;BaseQRankSum=16.806;DP=1011;FS=29.877;HRun=0;HaplotypeScore=136.6856;InbreedingCoeff=0.9289;MQ=66.60;MQ0=2;MQRankSum=0.209;QD=25.97;ReadPosRankSum=-0.696;VQSLOD=3.5420;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:51:99:0,142,2415	0/0:17,0:17:44.77:0,45,759	0/0:47,0:30:48.10:0,48,779	0/0:46,1:32:51.52:0,52,755	0/0:22,0:22:63.22:0,63,1063	0/0:20,0:20:51.17:0,51,860	0/0:22,0:22:51.17:0,51,861	1/1:6,29:34:84.27:1081,84,0	0/0:43,0:43:99:0,114,1865	0/0:39,0:39:99:0,108,1823	0/0:29,0:28:78.27:0,78,1310	0/0:47,0:47:99:0,129,2137	0/0:34,0:34:99:0,99,1670	0/0:49,0:49:99:0,138,2328	0/0:49,0:49:99:0,126,2096	0/0:50,0:50:99:0,135,2273	0/0:17,0:17:45.15:0,45,758	0/0:22,0:22:51.17:0,51,860	1/1:7,17:24:51.16:656,51,0	1/1:2,22:24:45.15:579,45,0	1/1:9,81:90:99:2857,223,0	0/0:43,0:43:99:0,114,1870	0/1:27,2:29:1.97:2,0,1088	0/0:44,0:44:99:0,108,1791	0/0:20,0:20:57.19:0,57,956	0/0:53,0:53:99:0,144,2426	1/1:3,24:27:60.20:772,60,0	0/0:16,0:16:48.16:0,48,810
chr10	104097461	.	T	TCGGGA	7354.70	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.605;DP=729;FS=3.132;HRun=0;HaplotypeScore=137.6762;InbreedingCoeff=0.9997;MQ=84.45;MQ0=0;MQRankSum=-14.524;QD=57.91;ReadPosRankSum=-2.120;VQSLOD=4.8826;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,150,2984	0/0:16,0:16:39.09:0,39,792	0/0:31,0:31:72.21:0,72,1334	0/0:17,0:17:42.12:0,42,788	0/0:17,0:17:45.15:0,45,887	0/0:22,0:21:60.21:0,60,1189	0/0:34,0:34:87.30:0,87,1749	1/1:23,12:35:61.45:1700,61,0	0/0:22,0:22:63.22:0,63,1279	0/0:32,0:32:87.28:0,87,1686	0/0:14,0:14:42.14:0,42,841	0/0:23,0:23:69.20:0,69,1309	0/0:19,0:19:48.12:0,48,899	0/0:26,0:26:66.23:0,66,1340	0/0:27,0:27:78.27:0,78,1560	0/0:21,0:21:60.19:0,60,1179	0/0:38,0:38:93.28:0,93,1797	0/0:27,0:27:69.24:0,69,1389	1/1:14,9:24:45.15:1270,45,0	1/1:5,16:21:45.15:1345,45,0	1/1:5,12:18:27.09:815,27,0	0/0:29,0:29:84.27:0,84,1653	0/0:28,0:28:78.27:0,78,1574	0/0:45,0:45:99:0,126,2536	0/0:20,0:20:54.18:0,54,1082	0/0:27,0:27:75.25:0,75,1486	1/1:5,24:28:75.26:2225,75,0	0/0:17,0:17:45.15:0,45,908
chr10	104098292	.	CCCA	C	1469.11	PASS	AB=0.672;AC=9;AF=0.161;AN=56;BaseQRankSum=7.266;DP=672;FS=5.673;HRun=0;HaplotypeScore=111.9250;InbreedingCoeff=0.7064;MQ=56.86;MQ0=27;MQRankSum=-5.356;QD=11.39;ReadPosRankSum=1.518;VQSLOD=3.1772;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:51:99:0,143,3110	0/0:11,0:11:33.11:0,33,786	0/0:56,0:16:48.04:0,48,863	0/1:53,2:19:3.33:3,0,669	0/0:21,1:21:54.01:0,54,649	0/0:20,0:20:60.19:0,60,1229	0/0:22,0:22:66.20:0,66,1453	0/1:1,13:14:0.22:476,0,0	0/0:23,1:24:42.99:0,43,1456	0/0:22,0:21:63.17:0,63,1408	0/0:23,0:23:69.23:0,69,1524	0/0:18,0:18:54.18:0,54,1170	0/0:9,0:9:27.09:0,27,637	0/0:14,0:13:39.13:0,39,872	0/0:27,0:26:53.99:0,54,770	0/0:13,0:13:39.13:0,39,905	0/0:40,0:39:99:0,100,2266	0/0:30,0:30:42.26:0,42,1788	1/1:0,8:8:18.03:292,18,0	1/1:4,10:10:15.05:185,15,0	0/1:2,14:14:29.18:29,0,33	0/0:27,0:26:74.70:0,75,947	0/0:20,0:20:60.09:0,60,1304	0/0:25,0:25:66.22:0,66,1539	0/0:19,0:19:54.17:0,54,1216	0/0:26,0:25:75.13:0,75,1072	1/1:1,21:21:47.73:637,48,0	0/0:23,0:22:53.78:0,54,548
chr10	104098295	.	AAC	A	2357.34	PASS	AB=0.943;AC=16;AF=0.286;AN=56;BaseQRankSum=10.247;DP=683;FS=0.428;HRun=0;HaplotypeScore=101.4744;InbreedingCoeff=0.5410;MQ=55.69;MQ0=28;MQRankSum=0.314;QD=9.54;ReadPosRankSum=3.399;VQSLOD=3.4341;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,1:50:84.72:0,85,1265	0/0:12,0:12:27.09:0,27,417	0/0:55,0:15:4.90:0,5,88	0/0:51,0:15:12.04:0,12,168	1/1:6,16:22:39.12:460,39,0	0/1:18,2:20:26.30:26,0,522	0/0:21,0:21:42.61:0,43,647	0/0:18,0:17:8.97:0,9,86	0/1:23,1:24:4.66:5,0,572	0/0:20,1:21:4.42:0,4,636	0/0:20,3:23:15.59:0,16,642	0/0:16,1:17:3.62:0,4,530	0/0:10,0:9:15.03:0,15,207	0/0:14,0:13:32.94:0,33,485	1/1:7,18:24:7.99:309,8,0	0/0:14,0:14:30.10:0,30,475	0/1:33,3:36:35.05:35,0,1127	0/0:27,0:30:50.62:0,51,926	0/0:14,0:14:18.06:0,18,222	0/1:16,0:13:4.21:50,0,4	0/0:17,0:15:7.26:0,7,77	1/1:6,18:25:44.80:490,45,0	0/0:20,0:20:17.51:0,18,649	0/0:25,2:28:18.64:0,19,763	0/0:18,1:19:9.59:0,10,628	1/1:7,20:26:20.83:558,21,0	1/1:27,0:27:1.15:112,1,0	1/1:1,17:19:44.80:490,45,0
chr10	104098303	.	CACACACACACACACAT	C	1885.31	PASS	AB=0.848;AC=4;AF=0.071;AN=56;BaseQRankSum=7.109;DP=695;FS=1.888;HRun=0;HaplotypeScore=265.1302;InbreedingCoeff=0.5106;MQ=52.19;MQ0=31;MQRankSum=-6.595;QD=27.32;ReadPosRankSum=3.024;VQSLOD=2.5502;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:98.91:0,99,5764	0/0:11,0:11:27.09:0,27,1933	0/0:54,0:11:14.79:0,15,569	0/0:47,0:11:15.05:0,15,559	0/0:26,0:25:45.63:0,46,2293	0/0:22,0:22:51.65:0,52,2899	0/0:20,0:20:57.18:0,57,3141	0/0:15,0:14:15.59:0,16,270	0/0:24,0:24:51.18:0,51,3394	0/0:25,0:24:66.23:0,66,3433	0/0:22,0:22:54.19:0,54,2950	0/0:16,0:16:42.14:0,42,2775	0/0:9,0:8:15.05:0,15,935	0/0:17,0:16:42.14:0,42,2321	0/0:25,0:24:36.12:0,36,1683	0/0:14,0:14:33.11:0,33,2187	0/0:42,0:41:99:0,102,6641	0/0:32,0:32:84.76:0,85,4729	0/0:18,0:18:34.12:0,34,347	1/1:16,4:16:14.79:598,15,0	0/1:19,1:17:68.98:69,0,254	0/0:25,0:24:51.18:0,51,2564	0/0:20,0:20:57.16:0,57,3426	0/0:32,0:32:69.24:0,69,4252	0/0:18,0:18:48.16:0,48,3263	0/0:25,0:23:63.19:0,63,2882	0/1:19,10:28:5.72:1331,0,6	0/0:20,0:19:45.15:0,45,2470
chr10	104098656	.	CAT	C	820.46	PASS	AB=0.839;AC=2;AF=0.036;AN=56;BaseQRankSum=7.560;DP=1148;FS=12.373;HRun=0;HaplotypeScore=162.8125;InbreedingCoeff=-0.0378;MQ=55.86;MQ0=14;MQRankSum=-5.734;QD=9.22;ReadPosRankSum=-3.225;VQSLOD=2.2002;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,102,1790	0/0:18,0:18:54.13:0,54,922	0/0:61,0:36:99:0,105,1860	0/0:53,0:31:88.40:0,88,1434	0/0:34,0:34:96.26:0,96,1724	0/0:24,0:23:69.24:0,69,1331	0/0:47,0:47:99:0,132,2468	0/1:33,30:56:99:669,0,1082	0/0:53,0:53:99:0,154,2882	0/0:28,0:28:84.21:0,84,1426	0/0:25,0:25:75.26:0,75,1426	0/0:55,0:56:99:0,162,2951	0/0:43,0:43:99:0,126,2174	0/0:42,0:42:99:0,120,2229	0/0:61,0:61:99:0,178,3244	0/0:57,0:57:99:0,172,3148	0/0:33,0:33:73.96:0,74,1489	0/0:41,0:41:99:0,114,2203	0/1:26,0:25:99:240,0,596	0/0:23,0:23:14.10:0,14,77	0/0:76,0:76:41.82:0,42,710	0/0:30,0:30:90.30:0,90,1693	0/0:28,0:28:84.29:0,84,1592	0/0:74,0:74:99:0,196,3650	0/0:29,0:29:84.22:0,84,1458	0/0:42,0:41:99:0,120,2154	0/0:27,0:27:26.19:0,26,216	0/0:9,0:9:27.09:0,27,517
chr10	104098658	.	T	TACACTCAC	3419.02	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-0.572;DP=1162;FS=8.275;HRun=0;HaplotypeScore=283.2973;InbreedingCoeff=0.8932;MQ=55.78;MQ0=14;MQRankSum=-4.602;QD=31.37;ReadPosRankSum=-5.005;VQSLOD=1.0893;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:44:83.59:0,84,2047	0/0:20,0:20:45.11:0,45,1022	0/0:60,0:35:52.42:0,52,1230	0/0:52,0:31:50.72:0,51,1097	0/0:34,0:34:73.48:0,73,1740	0/0:24,0:23:57.20:0,57,1357	0/0:48,0:48:99:0,123,2718	1/1:58,0:51:32.40:1665,32,0	0/0:52,0:52:99:0,138,3459	0/0:28,0:28:60.18:0,60,1420	0/0:27,0:27:66.23:0,66,1645	0/0:55,0:55:99:0,142,3283	0/0:42,0:42:90.27:0,90,2054	0/0:40,0:40:99:0,111,2705	0/0:60,0:60:99:0,163,3906	0/0:57,0:57:99:0,153,3511	0/0:34,0:34:69.35:0,69,1610	0/0:43,0:43:99:0,111,2631	1/1:7,15:23:51.12:1244,51,0	0/0:3,22:29:0:0,0,0	0/0:23,53:87:0.37:0,0,1	0/0:33,0:33:84.27:0,84,1878	0/0:28,0:28:75.26:0,75,1817	0/0:74,0:74:99:0,175,4129	0/0:29,0:29:60.16:0,60,1347	0/0:42,0:41:99:0,111,2555	1/1:2,20:27:12.04:510,12,0	0/0:10,0:10:27.09:0,27,618
chr10	104098802	.	T	TACACAC	1620.22	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.584;DP=986;FS=9.105;HRun=0;HaplotypeScore=232.8828;InbreedingCoeff=0.8377;MQ=53.64;MQ0=15;MQRankSum=-8.661;QD=9.76;ReadPosRankSum=-5.681;VQSLOD=-0.5399;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:44:83.17:0,83,1688	0/0:13,0:13:29.94:0,30,463	0/0:39,0:6:3.01:0,3,63	0/0:44,0:14:26.84:0,27,388	0/0:32,0:32:84.25:0,84,1706	0/0:34,0:34:80.86:0,81,1545	0/0:46,0:46:95.92:0,96,1775	1/1:51,0:48:41.09:713,41,0	0/0:47,0:46:99:0,117,2235	0/0:51,0:50:99:0,102,1764	0/0:21,0:21:51.59:0,52,932	0/0:35,0:35:65.33:0,65,1149	0/0:39,0:39:91.80:0,92,1730	0/0:37,0:37:85.98:0,86,1683	0/0:47,0:47:99:0,127,2369	0/0:52,0:52:99:0,132,2668	0/0:41,0:41:26.43:0,26,1662	0/0:34,0:34:0.49:0,0,1483	1/1:12,12:20:37.83:380,38,0	1/1:22,3:26:7.32:217,7,0	1/1:41,0:39:43.50:462,43,0	0/0:26,0:26:65.17:0,65,1131	0/0:23,0:23:54.16:0,54,1088	0/0:44,0:44:99:0,99,1883	0/0:16,0:16:36.07:0,36,644	0/0:29,0:29:68.93:0,69,1289	1/1:5,15:21:0.47:1,0,0	0/0:25,0:25:64.48:0,64,1315
chr10	104102493	.	GACACACACGCAC	G	1139.97	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=7.423;DP=655;FS=5.888;HRun=0;HaplotypeScore=217.9431;InbreedingCoeff=0.7608;MQ=74.09;MQ0=14;MQRankSum=0.835;QD=12.00;ReadPosRankSum=0.071;VQSLOD=2.1760;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:77.80:0,78,1887	0/0:5,0:5:8.97:0,9,225	0/0:50,0:29:39.80:0,40,372	0/0:39,0:24:26.93:0,27,283	1/1:2,12:13:3.01:109,3,0	0/0:12,0:10:25.93:0,26,434	0/0:30,0:30:65.79:0,66,1573	0/0:38,0:36:87.57:0,88,666	0/0:38,0:38:89.54:0,90,2404	0/0:17,0:17:35.95:0,36,590	0/0:14,0:14:17.95:0,18,538	0/0:28,0:28:56.67:0,57,1382	0/0:16,0:15:42.02:0,42,1259	0/0:22,0:22:39.07:0,39,668	1/1:2,17:20:8.83:280,9,0	0/0:26,0:26:56.01:0,56,1761	0/0:18,0:16:44.10:0,44,1155	0/0:19,0:19:53.94:0,54,1601	0/0:22,0:21:31.89:0,32,298	0/0:7,0:7:14.95:0,15,186	0/0:47,0:47:83.85:0,84,845	1/1:4,1:13:3.01:88,3,0	0/0:12,0:12:20.91:0,21,896	0/0:45,0:45:87.84:0,88,3407	0/0:16,0:16:41.90:0,42,1365	1/1:2,1:19:47.94:538,48,0	0/1:22,0:22:55.65:56,0,260	1/1:4,0:6:12:227,12,0
chr10	104102502	.	GCACACACA	G	970.20	PASS	AB=1.000;AC=17;AF=0.315;AN=54;BaseQRankSum=6.747;DP=650;FS=7.238;HRun=0;HaplotypeScore=165.6611;InbreedingCoeff=0.6637;MQ=63.19;MQ0=20;MQRankSum=-5.586;QD=4.92;ReadPosRankSum=0.823;VQSLOD=2.2680;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:39.12:0,39,1156	0/0:6,0:6:3.01:0,3,124	0/0:41,0:20:0:0,0,0	0/0:32,0:17:2.50:0,2,9	1/1:13,0:12:3.01:53,3,0	0/0:21,0:19:27.01:0,27,762	0/0:30,0:32:36.06:0,36,801	0/1:35,0:33:12.21:12,0,19	0/0:38,0:38:51.01:0,51,1441	0/0:14,0:13:12.50:0,13,235	0/0:10,0:11:12.03:0,12,329	0/0:22,0:25:18.31:0,18,814	0/0:16,0:17:27.02:0,27,736	0/0:24,0:24:22.86:0,23,576	1/1:18,0:18:8.81:134,9,0	0/0:20,0:24:30.56:0,31,949	0/0:21,0:20:24.54:0,25,682	0/0:22,0:24:45.12:0,45,1345	1/1:15,5:19:12.78:202,13,0	./.	1/1:43,11:52:0.94:1,1,0	1/1:11,0:10:3.01:32,3,0	0/0:16,0:16:24.08:0,24,762	0/0:39,0:44:66.09:0,66,2021	0/0:17,0:16:27.03:0,27,803	1/1:18,0:18:1.35:95,1,0	1/1:13,5:21:24.03:496,24,0	1/1:7,0:6:6.02:108,6,0
chr10	104104044	.	ATAAC	A	3758.11	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.698;DP=661;FS=0.460;HRun=0;HaplotypeScore=115.0946;InbreedingCoeff=0.9977;MQ=97.70;MQ0=0;MQRankSum=-4.144;QD=33.86;ReadPosRankSum=1.383;VQSLOD=3.6576;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,2393	0/0:6,0:6:18.06:0,18,464	0/0:45,0:45:99:0,117,2809	0/0:28,0:28:72.24:0,72,1645	0/0:21,0:21:45.14:0,45,1081	0/0:15,0:15:45.15:0,45,1156	0/0:26,0:26:69.24:0,69,1716	1/1:5,17:22:54.14:874,54,0	0/0:18,0:18:51.18:0,51,1315	0/0:35,0:35:96.32:0,96,2420	0/0:17,0:17:45.15:0,45,1113	0/0:24,0:24:69.24:0,69,1772	0/0:18,0:18:48.16:0,48,1226	0/0:22,0:22:60.21:0,60,1547	0/0:43,0:43:99:0,126,3095	0/0:28,0:28:78.27:0,78,2007	0/0:30,0:30:87.30:0,87,2245	0/0:21,0:21:57.20:0,57,1453	1/1:5,13:18:33.11:587,33,0	1/1:0,15:15:30.10:534,30,0	1/1:6,30:35:60.21:1068,60,0	0/0:21,0:21:51.18:0,51,1293	0/0:20,0:20:48.16:0,48,1157	0/0:29,0:29:87.30:0,87,2211	0/0:14,0:14:36.12:0,36,929	0/0:22,0:22:60.17:0,60,1456	1/1:3,17:19:39.13:694,39,0	0/0:9,0:8:27.09:0,27,693
chr10	104104184	.	GACACACACACACACAC	G	7315.51	PASS	AB=0.690;AC=9;AF=0.161;AN=56;BaseQRankSum=7.368;DP=727;FS=2.232;HRun=0;HaplotypeScore=310.1735;InbreedingCoeff=0.8249;MQ=66.02;MQ0=16;MQRankSum=-8.322;QD=60.46;ReadPosRankSum=1.618;VQSLOD=4.2580;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:34:57.19:0,57,2980	0/0:11,0:10:24.08:0,24,1303	0/0:47,0:27:15.05:0,15,311	0/0:28,0:17:6.02:0,6,122	1/1:16,9:26:51.08:1197,51,0	0/0:12,0:13:18.06:0,18,882	0/0:31,0:31:32.46:0,32,1233	0/0:28,0:25:42.11:0,42,1002	0/0:27,0:31:84.27:0,84,4201	0/0:22,0:24:48.16:0,48,2014	0/0:10,0:12:27.09:0,27,1456	0/0:28,0:29:72.08:0,72,4077	0/0:24,0:27:60.21:0,60,2971	0/0:22,0:23:36:0,36,1975	1/1:19,16:35:44.26:2082,44,0	0/0:26,0:32:60.19:0,60,2780	0/0:21,0:22:21.21:0,21,2544	0/0:28,0:30:66.14:0,66,3121	0/0:15,0:18:21.07:0,21,728	0/0:9,0:24:23.83:0,24,678	0/0:39,0:40:55.83:0,56,2509	1/1:14,13:27:51.17:1670,51,0	0/0:24,0:24:39.08:0,39,2028	0/0:33,0:35:69.20:0,69,3564	0/0:13,0:16:36.12:0,36,2101	0/1:16,13:29:99:2122,0,106	0/0:4,0:19:29.26:0,29,1237	1/1:3,1:4:11.07:245,11,0
chr10	104104248	.	C	CACACACACAA	10194.70	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.731;DP=910;FS=13.285;HRun=0;HaplotypeScore=326.0464;InbreedingCoeff=0.9960;MQ=55.90;MQ0=4;MQRankSum=-14.994;QD=65.35;ReadPosRankSum=-3.523;VQSLOD=3.2268;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:96.16:0,96,2409	0/0:10,0:10:26.83:0,27,608	0/0:53,0:38:70.57:0,71,1774	0/0:47,0:33:70.46:0,70,1457	1/1:27,5:32:60.16:1190,60,0	0/0:22,0:22:41.92:0,42,1554	0/0:28,0:28:75.11:0,75,1772	0/0:33,0:32:75.22:0,75,1935	0/0:28,0:28:78.20:0,78,1978	0/0:47,0:47:99:0,132,3669	0/0:19,0:19:54.15:0,54,1477	0/0:36,0:36:78.24:0,78,2296	0/0:27,0:27:69.15:0,69,1702	0/0:29,0:29:74.76:0,75,2133	1/1:33,13:46:99:3190,116,0	0/0:27,0:27:66.01:0,66,1869	0/0:34,0:34:64.49:0,64,2281	0/0:35,0:35:77.63:0,78,2288	0/0:28,0:28:60.14:0,60,1422	0/0:21,0:21:50.83:0,51,1388	0/0:67,0:67:99:0,164,4837	1/1:23,6:29:62.05:1632,62,0	0/0:22,0:22:56.78:0,57,1713	0/0:52,0:52:99:0,123,3159	0/0:22,0:22:53.18:0,53,1472	1/1:16,24:43:99:3490,102,0	0/0:28,0:28:57.18:0,57,1703	1/1:2,3:5:15.05:693,15,0
chr10	104104310	.	TACACACACATAAAC	T	3217.15	PASS	AB=0.872;AC=10;AF=0.179;AN=56;BaseQRankSum=8.762;DP=1029;FS=9.904;HRun=0;HaplotypeScore=389.1674;InbreedingCoeff=0.6550;MQ=55.12;MQ0=14;MQRankSum=-8.567;QD=17.97;ReadPosRankSum=0.664;VQSLOD=0.7279;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,114,6079	0/0:8,0:8:18.03:0,18,664	0/1:41,0:13:8.55:9,0,358	0/0:47,0:26:27.04:0,27,780	1/1:21,7:28:2.93:119,3,0	0/0:23,0:23:54.17:0,54,2835	0/0:33,0:33:75.19:0,75,2982	0/0:49,0:48:78.25:0,78,2856	0/0:43,0:43:96.32:0,96,5043	0/0:48,0:48:99:0,102,5467	0/0:22,0:22:51.18:0,51,2746	0/0:39,0:39:80.98:0,81,4111	0/0:41,0:41:99:0,102,4978	0/0:34,0:34:72.23:0,72,3655	1/1:15,24:39:12.04:478,12,0	0/0:49,0:49:99:0,132,7480	0/0:38,0:38:96.33:0,96,4592	0/0:37,0:37:78.75:0,79,3857	0/0:28,0:23:33.11:0,33,1959	0/0:38,0:38:93.28:0,93,4595	0/0:81,0:80:99:0,192,9346	1/1:8,24:30:18.06:716,18,0	0/0:20,0:20:48.16:0,48,2648	0/0:62,0:62:99:0,137,6396	0/0:25,0:25:60.21:0,60,3282	0/1:23,12:35:99:1924,0,143	0/0:29,0:28:78.22:0,78,3397	1/1:3,1:4:3.01:119,3,0
chr10	104104320	.	TAAAC	T	830.44	PASS	AB=0.906;AC=6;AF=0.107;AN=56;BaseQRankSum=9.799;DP=1011;FS=6.012;HRun=0;HaplotypeScore=199.6336;InbreedingCoeff=0.1481;MQ=55.24;MQ0=12;MQRankSum=-7.615;QD=6.92;ReadPosRankSum=1.475;VQSLOD=2.3995;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,159,3870	0/0:11,0:11:30.10:0,30,782	0/0:36,0:13:19.55:0,20,541	0/0:40,0:22:34.24:0,34,894	0/1:19,8:27:99:109,0,144	0/0:22,0:22:66.18:0,66,1635	0/0:28,0:28:84.25:0,84,2006	0/0:46,0:45:99:0,126,2890	0/0:44,0:44:99:0,129,3234	0/0:51,0:51:99:0,144,3626	0/0:24,0:24:66.21:0,66,1741	0/0:40,0:40:99:0,103,2594	0/0:42,0:42:99:0,104,3124	0/0:37,0:37:99:0,108,2651	0/1:34,0:34:48.08:48,0,283	0/0:52,0:52:99:0,157,4067	0/0:43,0:43:99:0,126,3137	0/0:36,0:36:96.67:0,97,2412	0/0:25,0:21:63.19:0,63,1520	0/0:41,0:41:99:0,117,2977	0/0:80,0:79:99:0,226,5824	0/1:29,0:27:99:122,0,131	0/0:20,0:20:60.19:0,60,1509	0/0:63,0:63:99:0,173,4340	0/0:25,0:25:75.22:0,75,1890	0/1:24,5:29:99:644,0,203	0/0:30,0:29:90.22:0,90,2255	1/1:1,0:1:3:28,3,0
chr10	104104452	.	G	GAC	16566.58	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=4.339;DP=1128;FS=0.000;HRun=0;HaplotypeScore=164.0942;InbreedingCoeff=0.9998;MQ=59.47;MQ0=6;MQRankSum=-2.604;QD=37.57;ReadPosRankSum=-0.846;VQSLOD=5.6663;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:96.29:0,96,1207	0/0:10,0:10:30.10:0,30,382	0/0:54,0:35:65.21:0,65,719	0/0:50,0:32:28.41:0,28,418	1/1:15,27:42:90.28:1447,90,0	0/0:25,0:25:60.17:0,60,739	0/0:39,0:39:99:0,102,1257	1/1:20,28:49:90.27:1410,90,0	0/0:43,0:43:99:0,105,1310	0/0:43,0:43:99:0,111,1385	0/0:22,0:22:57.17:0,57,712	0/0:36,0:36:75.22:0,75,928	0/0:50,0:50:99:0,123,1534	0/0:41,0:42:99:0,108,1360	1/1:17,37:54:99:2061,132,0	0/0:47,0:47:99:0,129,1640	0/0:33,0:34:84.10:0,84,1044	0/0:43,0:43:99:0,111,1394	1/1:16,15:28:66.18:1026,66,0	1/1:9,24:33:46.30:1306,46,0	1/1:23,48:70:99:2807,177,0	1/1:5,44:49:99:2123,129,0	0/0:36,0:36:89.94:0,90,1094	0/0:48,0:48:99:0,121,1480	0/0:28,0:28:69.19:0,69,849	1/1:19,33:52:76.11:1751,76,0	1/1:8,33:41:99:1837,111,0	1/1:3,15:18:48.16:799,48,0
chr10	104104526	.	T	TAC	11113.72	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-12.760;DP=1018;FS=13.912;HRun=0;HaplotypeScore=140.3905;InbreedingCoeff=0.9972;MQ=57.39;MQ0=9;MQRankSum=-0.941;QD=29.48;ReadPosRankSum=0.817;VQSLOD=5.6551;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:58.21:0,58,952	0/0:13,0:13:30.09:0,30,374	0/0:46,0:24:45.09:0,45,535	0/0:48,0:32:46.67:0,47,584	1/1:13,25:38:66.18:1027,66,0	0/0:24,0:24:51.16:0,51,636	0/0:46,0:46:99:0,117,1445	1/1:13,32:46:96.26:1470,96,0	0/0:41,0:41:99:0,105,1281	0/0:48,0:48:98.66:0,99,1380	0/0:20,0:21:50.35:0,50,573	0/0:36,0:36:99:0,102,1249	0/0:48,0:48:99:0,123,1504	0/0:37,0:37:96.28:0,96,1179	1/1:12,36:48:81.79:1465,82,0	0/0:38,0:38:93.30:0,93,1161	0/0:27,0:27:72.21:0,72,880	0/0:18,0:18:39.04:0,39,447	1/1:4,17:20:18.82:612,19,0	1/1:5,26:32:69.22:1106,69,0	1/1:17,50:67:45.98:1542,46,0	1/1:21,12:31:16.65:764,17,0	0/0:33,0:33:78.23:0,78,956	0/0:46,0:46:99:0,123,1532	0/0:34,0:34:81.24:0,81,994	1/1:6,30:35:87.19:1342,87,0	1/1:9,31:40:40.75:1193,41,0	1/1:3,12:15:35.55:593,36,0
chr10	104105904	.	C	CCCACCCT	10839.55	PASS	AB=0.683;AC=19;AF=0.339;AN=56;BaseQRankSum=9.349;DP=622;FS=19.827;HRun=0;HaplotypeScore=176.9934;InbreedingCoeff=0.9140;MQ=75.64;MQ0=0;MQRankSum=-15.225;QD=53.93;ReadPosRankSum=-2.310;VQSLOD=3.1160;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,126,2693	0/0:13,0:13:27.09:0,27,661	0/0:24,0:24:60.19:0,60,1253	0/0:23,0:23:57.13:0,57,1191	1/1:17,7:25:17.53:440,18,0	0/0:21,0:21:45.15:0,45,1042	0/0:30,0:30:81.26:0,81,1843	1/1:19,9:29:45.12:1426,45,0	0/0:24,0:24:66.22:0,66,1497	0/0:25,0:25:66.23:0,66,1512	0/0:12,0:12:27.09:0,27,656	0/0:21,0:21:51.17:0,51,1199	0/0:18,0:18:51.16:0,51,1200	0/0:17,0:17:48.08:0,48,1041	1/1:6,12:19:45.15:1671,45,0	0/0:26,0:26:78.24:0,78,1860	0/0:33,0:33:93.30:0,93,2225	0/0:26,0:26:63.22:0,63,1502	1/1:13,2:15:30.08:865,30,0	1/1:8,8:17:29.77:1072,30,0	1/1:14,5:19:17.78:368,18,0	1/1:4,6:14:27.56:960,28,0	0/0:15,0:15:39.12:0,39,818	0/0:17,0:17:48.15:0,48,1127	0/0:23,0:23:60.18:0,60,1339	0/1:15,13:28:16.41:1729,0,16	1/1:12,12:25:51.18:1849,51,0	1/1:6,3:10:12.04:461,12,0
chr10	104105926	.	G	GCCTCT	12318.14	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=8.373;DP=640;FS=1.124;HRun=0;HaplotypeScore=162.1157;InbreedingCoeff=0.9612;MQ=76.21;MQ0=0;MQRankSum=-16.820;QD=62.53;ReadPosRankSum=-3.074;VQSLOD=4.4941;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,157,3328	0/0:14,0:14:42.10:0,42,801	0/0:19,0:19:57.19:0,57,1179	0/0:25,0:25:68.89:0,69,1300	1/1:4,19:23:21.98:523,22,0	0/0:17,0:17:48.15:0,48,1000	0/0:27,0:27:81.28:0,81,1740	1/1:18,9:28:81.20:2146,81,0	0/0:25,0:25:75.26:0,75,1620	0/0:34,0:34:99:0,102,2102	0/0:15,0:15:42.14:0,42,885	0/0:23,0:23:66.21:0,66,1393	0/0:27,0:27:81.28:0,81,1705	0/0:19,0:19:57.20:0,57,1238	1/1:6,15:23:57.20:1618,57,0	0/0:24,0:24:72.25:0,72,1564	0/0:32,0:32:93.32:0,93,2019	0/0:28,0:28:78.25:0,78,1648	1/1:5,13:19:51.17:1553,51,0	1/1:3,15:18:39.60:1213,40,0	1/1:6,9:16:18.03:497,18,0	1/1:8,11:19:27.56:811,28,0	0/0:19,0:19:51.17:0,51,1078	0/0:19,0:19:54.17:0,54,1132	0/0:24,0:24:66.23:0,66,1433	1/1:8,15:24:1.07:1790,1,0	1/1:3,16:19:57.16:1729,57,0	1/1:2,5:8:15.05:437,15,0
chr10	104106244	.	C	CA	2746.54	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-7.130;DP=605;FS=4.936;HRun=4;HaplotypeScore=63.3383;InbreedingCoeff=0.9973;MQ=85.31;MQ0=0;MQRankSum=-2.331;QD=33.91;ReadPosRankSum=0.018;VQSLOD=4.1635;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,1156	0/0:10,0:10:24.07:0,24,272	0/0:24,0:25:58.29:0,58,621	0/0:26,0:26:39.96:0,40,654	1/1:0,21:21:51.04:634,51,0	0/0:20,0:20:57.15:0,57,636	0/0:25,0:25:63.14:0,63,694	0/0:39,0:39:99:0,102,1149	0/0:19,0:19:48.12:0,48,533	0/0:16,0:16:42.09:0,42,463	0/0:16,0:16:39.10:0,39,434	0/0:23,0:23:63.18:0,63,714	0/0:13,0:13:36.10:0,36,406	0/0:21,0:21:60.15:0,60,671	1/1:0,15:15:45.15:616,45,0	0/0:15,0:15:45.13:0,45,510	0/0:44,0:44:99:0,123,1370	0/0:23,0:23:63.18:0,63,714	0/0:22,0:22:66.16:0,66,729	0/0:19,0:19:51.14:0,51,578	0/0:22,0:22:66.17:0,66,738	1/1:2,9:11:27.09:369,27,0	0/0:15,0:15:39.11:0,39,442	0/0:23,0:23:63.18:0,63,715	0/0:17,0:17:51.15:0,51,578	1/1:1,27:28:50.22:1057,50,0	0/0:33,0:33:93.25:0,93,1045	1/1:0,6:6:18.06:246,18,0
chr10	104106711	.	C	CT	166.12	PASS	AB=0.933;AC=7;AF=0.130;AN=54;BaseQRankSum=1.718;DP=342;FS=7.767;HRun=1;HaplotypeScore=54.6065;InbreedingCoeff=0.4819;MQ=43.57;MQ0=46;MQRankSum=-3.871;QD=4.37;ReadPosRankSum=-0.638;VQSLOD=-0.2155;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:18:29.91:0,30,332	0/0:3,0:2:6.02:0,6,78	0/0:15,0:4:5.78:0,6,53	0/0:34,0:6:5.80:0,6,68	./.	0/0:8,0:6:17.95:0,18,210	0/0:16,0:15:33.03:0,33,393	0/0:24,0:19:35.51:0,36,436	0/0:14,0:14:38.96:0,39,423	0/0:16,0:14:36.03:0,36,454	0/0:10,0:10:2.75:0,3,39	0/0:17,0:17:36.01:0,36,432	0/0:12,0:11:21.02:0,21,272	0/0:13,0:13:29.90:0,30,331	0/1:6,2:7:0.01:0,0,0	0/0:9,0:6:18.03:0,18,206	0/0:11,0:9:17.46:0,17,233	0/0:16,0:12:30.10:0,30,395	0/1:9,0:9:42.77:43,0,135	0/0:7,2:9:2.90:0,3,21	0/0:14,0:10:5.98:0,6,58	0/1:5,0:4:0:0,0,0	0/0:8,0:6:15.05:0,15,195	0/0:14,0:11:11.99:0,12,124	0/0:8,0:8:21.03:0,21,253	1/1:4,4:6:9.02:102,9,0	0/0:4,1:3:5.51:0,6,77	1/1:5,3:4:9.03:134,9,0
chr10	104106792	.	CTG	C	394.96	PASS	AB=1.000;AC=25;AF=0.543;AN=46;BaseQRankSum=2.555;DP=438;FS=22.761;HRun=0;HaplotypeScore=53.5604;InbreedingCoeff=-0.1567;MQ=30.75;MQ0=142;MQRankSum=2.057;QD=1.15;ReadPosRankSum=-2.355;VQSLOD=-0.5850;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:33:36.80:37,0,41	0/1:12,0:9:7.63:53,0,8	./.	./.	./.	0/1:20,0:13:13.59:26,0,14	0/1:22,0:12:50.12:50,0,53	./.	0/1:21,0:11:15.99:16,0,18	0/1:22,0:17:17.67:18,0,139	0/0:16,0:13:3.94:0,4,25	0/1:14,0:9:1.15:1,0,61	0/0:13,0:7:4.20:0,4,40	0/1:25,0:15:24.23:64,0,24	1/1:12,0:4:2.96:19,3,0	0/0:12,0:8:7.98:0,8,49	0/1:33,0:19:17.96:18,0,99	0/1:16,0:9:7.99:8,0,56	1/1:7,3:3:8.91:62,9,0	./.	1/1:26,0:8:2.97:20,3,0	1/1:6,0:6:8.99:74,9,0	0/0:17,0:13:2.98:0,3,21	0/1:30,0:17:25.34:25,0,69	0/0:11,0:9:5.84:0,6,39	1/1:8,2:3:0.47:1,0,0	1/1:7,0:1:2.96:19,3,0	1/1:12,0:2:2.96:19,3,0
chr10	104107650	.	TAC	T	252.17	PASS	AB=0.928;AC=14;AF=0.318;AN=44;BaseQRankSum=4.700;DP=477;FS=0.000;HRun=0;HaplotypeScore=55.6241;InbreedingCoeff=-0.3138;MQ=62.23;MQ0=6;MQRankSum=0.868;QD=0.97;ReadPosRankSum=-0.096;VQSLOD=1.2629;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:40:28.32:28,0,118	0/1:4,0:4:18.19:18,0,38	./.	./.	1/1:11,0:10:2.84:14,3,0	0/0:10,0:10:5.91:0,6,60	0/1:16,5:23:63.06:63,0,73	./.	0/0:12,0:12:2.99:0,3,23	0/1:15,1:15:23.03:23,0,38	0/1:10,3:13:20.86:21,0,36	0/0:12,0:12:6:0,6,68	0/0:11,0:11:3.01:0,3,43	0/0:18,0:17:6.02:0,6,88	0/1:17,2:19:12.97:66,0,13	0/1:19,1:20:10.99:11,0,161	0/1:30,2:31:16.12:16,0,383	0/1:20,5:26:88.96:89,0,244	0/0:17,0:16:2.22:0,2,7	./.	0/1:40,0:39:11.99:12,0,46	0/1:13,0:13:13.10:13,0,32	0/1:4,0:4:0:0,0,0	0/0:35,0:35:39.04:0,39,483	0/0:9,0:9:0:0,0,0	./.	0/0:8,0:8:6.02:0,6,87	./.
chr10	104108829	.	GCA	G	5756.24	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.871;DP=1066;FS=0.959;HRun=0;HaplotypeScore=144.2000;InbreedingCoeff=0.8902;MQ=62.39;MQ0=12;MQRankSum=0.584;QD=29.83;ReadPosRankSum=1.743;VQSLOD=6.6575;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:66,2:67:76.07:0,76,2369	0/0:14,1:15:1.91:0,2,527	0/0:55,2:35:27.33:0,27,854	0/0:47,0:34:58.61:0,59,931	1/1:5,29:33:78.21:951,78,0	0/0:27,0:27:54.18:0,54,886	0/0:31,0:31:81.28:0,81,1324	0/0:32,0:32:69.24:0,69,1121	0/0:51,2:53:21.85:0,22,1941	0/0:51,0:51:99:0,132,2022	0/0:20,0:20:57.18:0,57,905	0/0:43,3:46:52:0,52,1826	0/0:33,0:33:87.30:0,87,1421	0/0:43,1:44:92.24:0,92,2002	1/1:13,39:50:99:1515,123,0	0/0:28,2:30:12.89:0,13,1254	0/0:30,0:30:66.17:0,66,1048	0/0:28,1:29:28.05:0,28,941	0/0:15,0:14:24.55:0,25,386	0/0:29,0:29:69.24:0,69,1118	0/0:78,3:81:40.41:0,40,2811	1/1:3,39:42:99:1301,105,0	0/0:24,2:26:32.04:0,32,1045	0/0:42,2:44:61.87:0,62,1474	0/0:32,1:34:38.04:0,38,1115	1/1:7,48:55:99:1707,129,0	0/0:29,2:31:0.85:0,1,1034	1/1:1,9:10:12.43:283,12,0
chr10	104108965	.	ACG	A	7663.10	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=16.193;DP=1168;FS=4.354;HRun=0;HaplotypeScore=223.0810;InbreedingCoeff=0.9999;MQ=61.20;MQ0=2;MQRankSum=4.218;QD=35.48;ReadPosRankSum=3.171;VQSLOD=5.0309;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,117,2218	0/0:15,0:15:45.11:0,45,819	0/0:41,0:34:83.90:0,84,1137	0/0:51,0:40:54.31:0,54,1398	1/1:1,33:34:75.25:1146,75,0	0/0:28,0:28:72.23:0,72,1339	0/0:29,0:29:78.25:0,78,1428	0/0:44,0:44:99:0,123,1997	0/0:76,0:76:99:0,223,4081	0/0:78,0:78:99:0,232,4110	0/0:23,0:23:69.17:0,69,1208	0/0:52,0:52:99:0,153,2840	0/0:39,0:39:99:0,108,2023	0/0:35,0:35:99:0,99,1812	1/1:3,59:62:99:2015,132,0	0/0:39,0:39:99:0,108,2002	0/0:20,0:21:33.55:0,34,830	0/0:34,0:35:88.52:0,89,1690	0/0:19,0:19:54.13:0,54,943	0/0:51,0:51:99:0,150,2782	0/0:79,0:79:99:0,219,3835	1/1:1,52:53:99:1787,117,0	0/0:40,0:40:99:0,117,2128	0/0:41,0:42:99:0,111,2087	0/0:32,0:32:86.99:0,87,1603	1/1:2,52:54:98.66:2120,99,0	0/0:35,0:35:99:0,102,1921	1/1:0,13:13:39.13:595,39,0
chr10	104109162	.	A	AT	1016.20	PASS	AB=0.726;AC=9;AF=0.167;AN=54;BaseQRankSum=-6.347;DP=896;FS=10.610;HRun=1;HaplotypeScore=118.6667;InbreedingCoeff=0.4742;MQ=55.48;MQ0=18;MQRankSum=2.183;QD=8.00;ReadPosRankSum=4.908;VQSLOD=0.2301;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.10:0,93,1206	0/0:14,0:14:42.14:0,42,587	0/0:37,0:18:48.16:0,48,658	0/0:29,0:7:21.06:0,21,273	1/1:0,1:1:3.01:48,3,0	0/0:23,0:23:69.16:0,69,939	0/0:35,0:35:99:0,101,1366	0/0:62,0:61:99:0,151,2316	0/0:52,0:53:99:0,130,2147	0/0:89,0:89:99:0,250,3454	0/0:31,1:32:39.30:0,39,1091	0/0:39,0:39:99:0,114,1526	0/0:44,1:45:81.47:0,81,1707	0/0:43,0:43:99:0,129,1771	1/1:0,2:1:3.01:48,3,0	0/0:36,0:36:99:0,105,1461	0/0:22,0:24:28.46:0,28,816	0/1:25,1:27:2.12:2,0,753	0/0:22,1:21:63.18:0,63,845	0/0:38,0:38:96.23:0,96,1277	0/1:47,43:73:99:818,0,1502	1/1:1,2:3:6.02:96,6,0	0/0:31,0:31:84.28:0,84,1171	0/0:27,0:27:71.87:0,72,1004	0/0:26,0:25:66.15:0,66,861	0/1:1,3:4:29.93:132,0,30	0/0:30,0:26:63.15:0,63,879	./.
chr10	104109224	.	TAC	T	4097.05	PASS	AB=1.000;AC=9;AF=0.173;AN=52;BaseQRankSum=10.180;DP=1112;FS=5.691;HRun=0;HaplotypeScore=184.3034;InbreedingCoeff=0.8980;MQ=51.36;MQ0=97;MQRankSum=5.603;QD=13.84;ReadPosRankSum=-2.576;VQSLOD=2.6761;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,2:37:55.72:0,56,1117	0/0:12,0:11:18.03:0,18,243	./.	./.	0/0:27,0:25:51.13:0,51,752	0/0:25,0:23:48.12:0,48,724	0/0:22,0:14:14.75:0,15,174	0/1:34,0:15:4.08:118,0,4	0/0:44,0:43:99:0,102,1553	0/0:92,0:75:99:0,199,3099	0/0:33,0:29:61.47:0,61,940	0/0:42,0:39:97.50:0,97,1532	0/0:43,0:39:84.22:0,84,1273	0/0:36,0:36:93.79:0,94,1545	0/0:32,0:30:69.22:0,69,1070	0/0:42,0:41:93.08:0,93,1431	0/0:29,1:26:18.23:0,18,685	0/0:36,2:37:48.95:0,49,1262	1/1:4,23:23:63.09:747,63,0	1/1:5,92:94:78.50:1558,79,0	1/1:52,19:62:72.08:1016,72,0	0/0:33,0:30:87.16:0,87,1135	0/0:34,0:32:81.24:0,81,1281	0/0:26,0:23:45.13:0,45,724	0/0:35,0:32:84.20:0,84,1329	0/0:58,0:42:99:0,120,1665	1/1:4,63:61:50.92:658,51,0	0/0:14,0:14:39.12:0,39,614
chr10	104109318	.	C	CAT	7078.59	PASS	AB=0.950;AC=12;AF=0.214;AN=56;BaseQRankSum=-4.620;DP=1129;FS=5.957;HRun=0;HaplotypeScore=183.3773;InbreedingCoeff=0.7836;MQ=56.58;MQ0=11;MQRankSum=-2.744;QD=23.67;ReadPosRankSum=-0.295;VQSLOD=5.1731;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,1:54:99:0,125,1751	0/0:19,0:19:45.11:0,45,588	0/0:56,0:37:86.93:0,87,1047	0/0:46,0:30:75.20:0,75,959	1/1:12,22:33:75.21:1268,75,0	0/0:24,0:24:63.18:0,63,850	0/0:25,0:25:72.05:0,72,990	0/1:84,4:81:61.19:61,0,1954	0/0:37,0:37:99:0,108,1471	0/0:69,0:68:99:0,192,2635	0/0:26,0:26:72.24:0,72,1024	0/0:39,0:39:99:0,106,1532	0/0:35,0:34:93.26:0,93,1272	0/0:28,0:28:78.23:0,78,1078	1/1:6,25:30:63.20:1112,63,0	0/0:37,0:37:99:0,102,1404	0/0:33,0:33:90.09:0,90,1187	0/0:35,1:36:13.22:0,13,1135	0/0:20,0:18:45.09:0,45,601	0/0:48,0:48:99:0,109,1510	0/0:104,2:103:99:0,117,3235	1/1:13,34:46:99:1874,108,0	0/0:31,0:31:90.21:0,90,1207	0/0:31,1:32:87.09:0,87,1157	0/0:29,0:29:80.71:0,81,1058	1/1:13,34:44:65.37:1762,65,0	0/1:31,2:31:99:121,0,902	1/1:5,13:19:57.07:882,57,0
chr10	104109376	.	TCACA	T	4338.37	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=15.870;DP=1071;FS=21.414;HRun=0;HaplotypeScore=236.8122;InbreedingCoeff=0.9849;MQ=57.81;MQ0=9;MQRankSum=-0.461;QD=26.95;ReadPosRankSum=1.585;VQSLOD=3.3836;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:54:99:0,120,2883	0/0:14,0:14:42.14:0,42,1028	0/0:52,0:26:8.46:0,8,863	0/0:60,0:32:43.13:0,43,992	1/1:27,6:32:57.08:828,57,0	0/0:35,0:35:78.27:0,78,1950	0/0:28,0:30:50.06:0,50,1715	0/0:36,0:37:90.10:0,90,2149	0/0:32,0:32:81.28:0,81,1985	0/0:73,0:74:99:0,192,4667	0/0:27,0:29:77.84:0,78,1748	0/0:49,0:49:99:0,117,2854	0/0:41,0:41:99:0,105,2540	0/0:28,0:28:69.22:0,69,1678	1/1:26,3:29:45.10:634,45,0	0/0:34,0:34:93.21:0,93,2272	0/0:35,0:35:72.65:0,73,1900	0/0:24,0:24:66.22:0,66,1540	0/0:16,0:15:33.11:0,33,806	0/0:47,0:47:99:0,111,2788	0/0:94,0:94:99:0,183,4781	1/1:32,4:36:60.17:848,60,0	0/0:24,0:24:59.72:0,60,1389	0/0:42,0:42:99:0,105,2592	0/0:26,0:26:63.22:0,63,1593	1/1:35,8:45:84.49:1490,84,0	0/0:32,0:32:78.27:0,78,1894	1/1:17,1:18:36.12:537,36,0
chr10	104109392	.	ATG	A	4195.68	PASS	AB=0.921;AC=11;AF=0.196;AN=56;BaseQRankSum=15.936;DP=1086;FS=18.181;HRun=0;HaplotypeScore=198.0382;InbreedingCoeff=0.8667;MQ=54.93;MQ0=15;MQRankSum=-2.406;QD=21.85;ReadPosRankSum=5.528;VQSLOD=2.3191;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,135,2574	0/0:17,0:17:51.17:0,51,946	0/0:51,0:22:50.72:0,51,890	0/0:54,0:22:47.64:0,48,801	1/1:11,24:33:53.10:818,53,0	0/0:38,0:38:99:0,99,1923	0/0:31,0:31:67.83:0,68,1568	0/0:52,0:52:99:0,156,2798	0/0:33,0:33:93.32:0,93,1744	0/0:75,0:75:99:0,226,4216	0/0:28,0:28:83.81:0,84,1510	0/0:43,0:43:99:0,126,2421	0/0:45,0:44:99:0,129,2425	0/0:29,0:29:84.29:0,84,1616	1/1:7,23:30:53.34:756,53,0	0/0:38,0:38:76.88:0,77,2053	0/1:32,3:35:34.78:35,0,1542	0/0:22,0:22:63.21:0,63,1128	0/0:19,0:15:42.13:0,42,763	0/0:47,0:47:99:0,135,2542	0/0:91,1:92:99:0,207,4217	1/1:4,27:31:52.62:855,53,0	0/0:22,1:23:63.21:0,63,1206	0/0:42,1:43:99:0,115,2211	0/0:26,0:26:72.21:0,72,1393	1/1:18,30:45:7.04:1158,7,0	0/0:33,0:33:93.32:0,93,1813	1/1:1,12:13:36.12:574,36,0
chr10	104109394	.	G	GCA	4307.19	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=15.376;DP=1092;FS=14.119;HRun=0;HaplotypeScore=201.3544;InbreedingCoeff=0.9404;MQ=54.34;MQ0=14;MQRankSum=1.602;QD=26.59;ReadPosRankSum=4.552;VQSLOD=4.4932;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,126,1591	0/0:18,0:18:45.12:0,45,562	0/0:51,0:22:36.70:0,37,429	0/0:52,0:19:20.22:0,20,257	1/1:34,3:35:53.69:772,54,0	0/0:39,0:39:96.05:0,96,1220	0/0:32,0:32:81.22:0,81,1008	0/0:53,0:53:99:0,115,1370	0/0:34,0:34:78.71:0,79,990	0/0:72,0:72:99:0,190,2416	0/0:28,0:28:72.23:0,72,923	0/0:43,0:43:99:0,117,1474	0/0:44,0:43:99:0,117,1503	0/0:30,0:30:81.25:0,81,1027	1/1:26,4:30:60.20:900,60,0	0/0:38,0:39:99:0,104,1288	0/0:35,0:35:78.65:0,79,971	0/0:21,0:21:42.09:0,42,508	0/0:20,0:16:33.09:0,33,410	0/0:47,0:47:99:0,101,1342	0/0:92,0:92:99:0,198,2497	1/1:32,0:31:53.85:767,54,0	0/0:24,0:24:54.17:0,54,694	0/0:43,0:43:90.32:0,90,1245	0/0:26,0:26:72.09:0,72,822	1/1:45,5:47:0.66:1346,1,0	0/0:33,0:33:90.27:0,90,1139	1/1:13,0:13:36.12:523,36,0
chr10	104109466	.	TAC	T	799.18	PASS	AB=0.939;AC=9;AF=0.161;AN=56;BaseQRankSum=11.179;DP=812;FS=6.777;HRun=0;HaplotypeScore=156.3648;InbreedingCoeff=0.7994;MQ=55.60;MQ0=6;MQRankSum=-6.640;QD=7.33;ReadPosRankSum=-1.898;VQSLOD=2.7823;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,2110	0/0:15,0:15:42.11:0,42,707	0/0:19,0:7:13.41:0,13,265	0/0:29,0:19:35.23:0,35,559	1/1:21,4:23:1.82:65,2,0	0/0:30,0:30:75.20:0,75,1233	0/0:31,0:31:84.26:0,84,1469	0/0:46,0:46:99:0,120,1926	0/0:22,0:22:66.16:0,66,1074	0/0:49,0:49:99:0,141,2341	0/0:29,0:29:75:0,75,1240	0/0:32,0:32:75.16:0,75,1156	0/0:38,0:38:99:0,105,1873	0/0:28,0:28:81.22:0,81,1361	1/1:23,1:23:43.10:221,43,0	0/0:32,0:32:96.24:0,96,1569	0/0:21,0:21:60.06:0,60,954	0/0:16,0:16:44.48:0,44,719	0/0:24,0:23:66.11:0,66,924	0/0:31,0:31:67.19:0,67,1108	0/0:51,0:51:99:0,126,1938	1/1:16,1:15:17.69:105,18,0	0/0:21,0:21:63.20:0,63,1122	0/0:41,0:41:99:0,99,1739	0/0:15,0:15:42.13:0,42,713	0/1:29,2:28:99:445,0,110	0/0:38,0:38:69.13:0,69,1056	1/1:12,0:12:22.45:116,22,0
chr10	104109482	.	T	TAC	1477.61	PASS	AB=0.741;AC=8;AF=0.143;AN=56;BaseQRankSum=10.055;DP=737;FS=6.980;HRun=0;HaplotypeScore=148.5421;InbreedingCoeff=0.6786;MQ=55.11;MQ0=0;MQRankSum=-9.252;QD=16.06;ReadPosRankSum=0.931;VQSLOD=3.4863;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,1782	0/0:13,0:13:36.09:0,36,522	0/0:20,0:8:18.05:0,18,254	0/0:22,0:20:33.83:0,34,715	0/1:12,9:19:19.23:169,0,19	0/0:26,0:26:70.44:0,70,993	0/0:39,0:39:99:0,105,1516	0/0:40,0:40:99:0,117,1768	0/0:20,0:20:57.19:0,57,867	0/0:45,0:45:99:0,129,1917	0/0:27,0:27:78.24:0,78,1144	0/0:29,0:29:84.29:0,84,1278	0/0:39,0:39:99:0,108,1616	0/0:28,0:28:78.22:0,78,1125	1/1:4,13:16:36.12:594,36,0	0/0:24,0:24:69.23:0,69,1050	0/0:25,0:25:67.63:0,68,1016	0/0:18,0:17:36.65:0,37,671	0/0:16,0:16:45.04:0,45,595	0/0:24,0:24:49.82:0,50,715	0/0:35,0:35:90.21:0,90,1304	1/1:17,5:20:7.48:222,7,0	0/0:25,0:25:66.21:0,66,982	0/0:41,0:41:99:0,108,1552	0/0:14,0:14:36.12:0,36,548	0/1:18,7:22:79.22:342,0,79	0/0:33,0:33:54.16:0,54,796	1/1:0,7:7:18.06:299,18,0
chr10	104109484	.	T	TACAC	1594.30	PASS	AB=0.944;AC=8;AF=0.143;AN=56;BaseQRankSum=9.866;DP=734;FS=3.631;HRun=0;HaplotypeScore=179.1974;InbreedingCoeff=0.7477;MQ=54.58;MQ0=1;MQRankSum=-9.596;QD=15.94;ReadPosRankSum=-0.887;VQSLOD=2.9125;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,108,1877	0/0:11,0:11:27.04:0,27,436	0/0:20,0:7:9.02:0,9,125	0/0:23,0:20:33.11:0,33,549	0/1:21,1:20:16.90:155,0,17	0/0:25,0:25:60.04:0,60,992	0/0:38,0:38:96.77:0,97,1602	0/0:39,0:39:96.30:0,96,1584	0/0:21,0:21:51.15:0,51,832	0/0:44,0:44:99:0,111,1900	0/0:26,0:26:75.24:0,75,1253	0/0:31,0:31:59.10:0,59,1333	0/0:38,0:38:93.27:0,93,1521	0/0:27,0:27:63.20:0,63,1061	1/1:20,0:19:36.12:517,36,0	0/0:24,0:24:57.19:0,57,991	0/0:25,0:25:44.21:0,44,1005	0/0:18,0:17:45.13:0,45,752	0/0:16,0:16:36.11:0,36,571	0/0:24,0:24:35.77:0,36,583	0/0:34,0:34:75.71:0,76,1221	1/1:22,2:22:12.24:209,12,0	0/0:24,0:24:57.15:0,57,904	0/0:39,0:39:99:0,99,1665	0/0:13,0:13:33.11:0,33,566	0/1:25,2:24:2.31:589,0,2	0/0:31,0:31:48.15:0,48,810	1/1:7,0:7:16.07:275,16,0
chr10	104109510	.	T	TACACACAC	3830.38	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=1.072;DP=717;FS=4.540;HRun=0;HaplotypeScore=212.0133;InbreedingCoeff=0.6769;MQ=51.01;MQ0=9;MQRankSum=-7.023;QD=19.64;ReadPosRankSum=-5.075;VQSLOD=2.0553;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:69.17:0,69,1380	0/0:6,0:6:6.02:0,6,149	0/0:40,0:9:15.03:0,15,190	0/0:30,0:14:8.70:0,9,113	0/0:15,0:13:4.35:0,4,29	0/0:26,0:26:18.05:0,18,924	0/0:35,0:36:68.97:0,69,1197	1/1:36,0:36:63.04:936,63,0	0/1:20,0:20:20.87:21,0,936	0/0:41,0:41:61.25:0,61,1593	0/0:21,0:21:36.07:0,36,634	0/0:32,0:33:66.19:0,66,1756	0/0:36,0:37:81.01:0,81,1574	0/0:23,0:25:51.12:0,51,1014	0/0:17,0:17:21.07:0,21,361	0/0:23,0:23:57.11:0,57,1190	0/0:34,0:34:58.82:0,59,1897	0/0:19,0:18:42.14:0,42,912	1/1:18,8:26:36.10:990,36,0	1/1:4,11:15:5.95:139,6,0	1/1:37,1:38:17:520,17,0	0/0:11,0:11:8.77:0,9,65	0/0:16,0:16:36.11:0,36,851	0/0:38,0:38:65.19:0,65,1736	0/0:10,0:10:21.06:0,21,400	0/1:20,0:19:35.83:36,0,422	1/1:11,23:37:33.11:1190,33,0	0/0:7,0:7:0:0,0,0
chr10	104109840	.	GCCCCCCCCCCCC	G	5150.67	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.617;DP=238;FS=7.656;HRun=18;HaplotypeScore=92.7381;InbreedingCoeff=0.7146;MQ=71.71;MQ0=1;MQRankSum=-8.289;QD=62.81;ReadPosRankSum=6.232;VQSLOD=2.9192;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:6.01:0,6,182	0/0:1,0:1:0:0,0,0	0/0:18,0:11:27.08:0,27,815	0/0:10,0:7:11.93:0,12,288	1/1:5,9:14:20.90:584,21,0	0/0:5,0:5:12.04:0,12,489	0/0:13,0:13:31.56:0,32,773	0/0:6,0:6:5.96:0,6,47	0/0:5,0:5:12.04:0,12,560	0/0:6,0:6:12.04:0,12,351	0/0:1,0:1:3.01:0,3,51	0/0:9,0:8:20.73:0,21,818	0/0:8,0:8:15.05:0,15,644	0/0:3,0:3:6.02:0,6,186	1/1:6,18:24:53.99:1705,54,0	0/0:6,0:6:9.02:0,9,171	0/0:13,0:13:30.07:0,30,1215	0/0:14,0:14:33.11:0,33,1512	0/0:4,0:4:9.02:0,9,149	0/0:2,0:2:0:0,0,0	0/0:6,0:6:9.02:0,9,319	1/1:1,14:15:36.12:1102,36,0	0/0:3,0:3:0:0,0,0	0/0:5,0:5:5.98:0,6,71	0/0:3,0:3:5.48:0,5,292	1/1:6,17:24:47.80:1474,48,0	0/0:6,0:6:18.06:0,18,806	1/1:1,4:5:8.99:286,9,0
chr10	104110291	.	A	AG	7296.50	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=18.332;DP=651;FS=1.751;HRun=1;HaplotypeScore=104.1661;InbreedingCoeff=0.9999;MQ=88.21;MQ0=1;MQRankSum=-8.131;QD=31.32;ReadPosRankSum=-0.100;VQSLOD=4.5144;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,135,1736	0/0:11,0:11:33.11:0,33,428	0/0:23,0:23:66.21:0,66,847	0/0:27,0:27:75.64:0,76,918	1/1:0,17:17:35.75:427,36,0	0/0:15,0:15:45.15:0,45,584	0/0:31,0:31:93.29:0,93,1193	1/1:4,26:30:90.23:987,90,0	0/0:23,0:23:69.21:0,69,882	0/0:25,0:25:72.22:0,72,910	0/0:17,0:17:48.14:0,48,609	0/0:24,0:24:72.22:0,72,920	0/0:13,0:13:36.12:0,36,467	0/0:19,0:19:54.17:0,54,701	1/1:2,23:24:66.18:781,66,0	0/0:20,0:20:60.20:0,60,779	0/0:35,0:35:99:0,102,1324	0/0:30,0:30:84.23:0,84,1059	1/1:11,23:34:87.26:1082,87,0	1/1:2,16:18:48.09:560,48,0	1/1:3,32:36:93.28:1133,93,0	1/1:0,13:13:36.10:440,36,0	0/0:18,0:18:51.15:0,51,647	0/0:15,0:15:45.13:0,45,570	0/0:23,0:23:66.21:0,66,857	1/1:4,17:21:52.29:643,52,0	1/1:1,23:25:69.17:780,69,0	1/1:0,13:13:39.12:464,39,0
chr10	104110293	.	C	CTA	9582.94	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=19.432;DP=659;FS=2.179;HRun=0;HaplotypeScore=110.7530;InbreedingCoeff=0.9999;MQ=88.33;MQ0=1;MQRankSum=-8.441;QD=40.26;ReadPosRankSum=-0.244;VQSLOD=6.5286;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,2100	0/0:11,0:11:33.11:0,33,505	0/0:26,0:26:66.22:0,66,1001	0/0:25,0:25:67.28:0,67,1005	1/1:3,16:19:36.11:550,36,0	0/0:15,0:15:45.15:0,45,689	0/0:33,0:33:93.29:0,93,1381	1/1:7,26:33:93.24:1383,93,0	0/0:23,0:23:69.23:0,69,1056	0/0:26,0:26:72.23:0,72,1064	0/0:17,0:17:48.16:0,48,734	0/0:23,0:23:69.19:0,69,1026	0/0:14,0:14:36.12:0,36,549	0/0:20,0:20:57.18:0,57,852	1/1:2,22:23:69.23:1138,69,0	0/0:20,0:20:60.20:0,60,919	0/0:35,0:35:99:0,102,1561	0/0:29,0:29:87.28:0,87,1305	1/1:4,20:24:66.22:1059,66,0	1/1:4,17:21:48.16:757,48,0	1/1:9,31:39:93.04:1507,93,0	1/1:3,12:15:36.11:562,36,0	0/0:19,0:19:51.17:0,51,780	0/0:16,0:16:48.13:0,48,689	0/0:23,0:23:66.22:0,66,1010	1/1:4,16:20:51.17:814,51,0	1/1:6,23:29:75.25:1180,75,0	1/1:0,13:13:39.13:632,39,0
chr10	104111161	.	TTG	T	3842.69	PASS	AB=0.984;AC=11;AF=0.196;AN=56;BaseQRankSum=13.052;DP=653;FS=0.395;HRun=0;HaplotypeScore=82.7280;InbreedingCoeff=0.8852;MQ=69.41;MQ0=13;MQRankSum=1.770;QD=22.74;ReadPosRankSum=-2.471;VQSLOD=3.3541;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:49.04:0,49,1134	0/0:8,0:8:24.06:0,24,387	0/0:58,0:31:28.04:0,28,669	0/1:62,1:27:33.95:34,0,271	0/0:30,0:30:87.24:0,87,1398	0/0:17,0:17:48.16:0,48,827	0/0:11,0:11:32.97:0,33,437	1/1:2,22:24:72.19:994,72,0	0/0:9,0:9:27.09:0,27,465	0/0:15,0:15:42.14:0,42,702	0/0:25,0:25:75.23:0,75,1200	0/0:9,0:9:24.07:0,24,415	0/0:10,0:10:30.05:0,30,459	0/0:10,0:10:30.10:0,30,519	0/0:20,0:20:60.14:0,60,915	0/0:20,0:20:60.17:0,60,982	0/0:50,0:50:99:0,150,2501	0/0:41,0:41:99:0,117,1905	1/1:4,26:28:72.12:955,72,0	1/1:2,17:19:38.95:709,39,0	1/1:4,11:15:29.92:471,30,0	0/0:18,0:18:51.17:0,51,880	0/0:22,0:22:66.20:0,66,1112	0/0:16,0:16:48.16:0,48,828	0/0:25,0:25:75.23:0,75,1235	0/0:30,0:30:87.28:0,87,1456	1/1:0,18:18:45.15:680,45,0	0/0:11,0:11:30.10:0,30,518
chr10	104111162	.	TG	T	1833.55	PASS	AB=0.969;AC=11;AF=0.196;AN=56;BaseQRankSum=14.277;DP=651;FS=0.390;HRun=1;HaplotypeScore=77.2011;InbreedingCoeff=0.8855;MQ=68.75;MQ0=14;MQRankSum=1.265;QD=10.98;ReadPosRankSum=-2.326;VQSLOD=0.8521;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:70.87:0,71,943	0/0:8,0:8:24.06:0,24,309	0/0:55,4:30:42.35:0,42,521	0/1:60,2:26:31.14:31,0,193	0/0:31,0:31:90.18:0,90,1122	0/0:17,0:17:47.96:0,48,651	0/0:11,0:11:32.95:0,33,355	1/1:24,0:24:71.31:504,71,0	0/0:9,0:9:27.09:0,27,366	0/0:16,0:16:45.13:0,45,587	0/0:26,0:26:78.19:0,78,976	0/0:8,0:8:24.08:0,24,326	0/0:10,0:10:30.05:0,30,371	0/0:10,0:10:30.10:0,30,408	0/0:20,0:20:60.12:0,60,733	0/0:20,0:20:60.17:0,60,784	0/0:50,0:50:99:0,150,1975	0/0:39,0:39:99:0,117,1518	1/1:28,1:27:71.51:518,72,0	1/1:18,1:19:51.38:392,51,0	1/1:13,2:15:36.76:257,37,0	0/0:17,0:17:51.17:0,51,694	0/0:23,0:23:69.19:0,69,905	0/0:16,0:16:48.16:0,48,650	0/0:26,0:26:78.22:0,78,1005	0/0:29,0:29:87.28:0,87,1159	1/1:18,0:17:44.64:312,45,0	0/0:10,0:10:30.10:0,30,408
chr10	104112251	.	AT	A	2519.79	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.500;DP=648;FS=0.904;HRun=4;HaplotypeScore=104.7763;InbreedingCoeff=0.9990;MQ=79.70;MQ0=9;MQRankSum=-9.628;QD=27.39;ReadPosRankSum=-2.705;VQSLOD=1.6545;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.16:0,93,1160	0/0:15,0:15:42.11:0,42,551	0/0:57,0:30:66.34:0,66,780	0/0:58,3:26:22.32:0,22,410	0/0:34,0:34:87.24:0,87,1134	0/0:26,0:26:72.22:0,72,987	0/0:19,0:19:51.17:0,51,713	1/1:6,12:18:51.12:559,51,0	0/0:21,0:21:59.79:0,60,805	0/0:19,0:19:51.17:0,51,702	0/0:19,0:19:51.16:0,51,692	0/0:15,0:15:45.08:0,45,570	0/0:14,0:14:39.07:0,39,504	0/0:25,0:25:69.14:0,69,908	0/0:19,0:19:48.16:0,48,670	0/0:20,0:19:51.16:0,51,696	0/0:17,0:17:51.16:0,51,693	0/0:21,0:21:54.15:0,54,732	1/1:7,16:23:60.15:667,60,0	1/1:2,19:21:54.05:576,54,0	1/1:4,6:10:27.06:292,27,0	0/0:21,0:20:54.17:0,54,735	0/0:19,0:19:51.16:0,51,689	0/0:16,0:16:48.11:0,48,633	0/0:16,0:16:45.11:0,45,570	0/0:28,0:28:78.26:0,78,1081	1/1:3,17:20:54.14:600,54,0	0/0:17,0:17:36.09:0,36,482
chr10	104112262	.	GGAA	G	3896.27	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=16.005;DP=671;FS=6.409;HRun=0;HaplotypeScore=131.9541;InbreedingCoeff=0.5943;MQ=69.95;MQ0=13;MQRankSum=-9.246;QD=18.21;ReadPosRankSum=2.699;VQSLOD=2.9427;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:86.85:0,87,1558	0/0:13,0:13:39.11:0,39,811	0/0:65,0:28:64.99:0,65,695	0/0:66,0:21:16.54:0,17,351	0/1:28,0:28:16.32:244,0,16	0/0:26,0:26:76.77:0,77,1529	0/0:24,0:24:66.17:0,66,1258	1/1:10,9:20:55.24:633,55,0	0/0:24,0:24:71.88:0,72,1418	0/0:21,0:20:60.18:0,60,1214	0/0:19,0:19:56.87:0,57,992	0/0:13,0:13:39.11:0,39,794	0/0:15,0:15:41.73:0,42,729	0/0:27,0:27:74.84:0,75,1480	0/1:23,0:23:0.89:176,0,1	0/0:20,0:19:54.15:0,54,1076	0/0:19,0:19:57.18:0,57,1257	0/0:22,0:22:62.70:0,63,1126	1/1:14,12:26:54.96:754,55,0	1/1:7,13:20:59.76:722,60,0	1/1:3,4:7:20.73:179,21,0	0/1:19,0:18:99:102,0,99	0/0:20,0:20:53.29:0,53,1014	0/0:16,0:15:42.12:0,42,878	0/0:18,0:18:53.76:0,54,1147	0/1:27,0:27:99:194,0,169	1/1:7,16:23:57:725,57,0	0/1:21,0:21:19.35:169,0,19
chr10	104112263	.	GAAA	G	4200.76	PASS	AB=0.992;AC=20;AF=0.357;AN=56;BaseQRankSum=11.812;DP=671;FS=15.189;HRun=12;HaplotypeScore=131.8587;InbreedingCoeff=0.8111;MQ=69.27;MQ0=13;MQRankSum=-6.243;QD=15.00;ReadPosRankSum=1.388;VQSLOD=0.6821;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:30:76.45:0,76,1223	0/0:12,0:13:33.09:0,33,603	0/0:64,0:28:38.78:0,39,412	0/1:64,0:20:16.46:16,0,228	1/1:2,25:27:69.12:851,69,0	0/0:23,0:26:69.14:0,69,1175	0/0:17,0:22:54.12:0,54,908	1/1:21,0:21:17.63:231,18,0	0/0:24,0:26:69.18:0,69,1155	0/0:21,0:20:48.13:0,48,834	0/0:17,0:19:46.18:0,46,663	0/0:12,0:13:33.09:0,33,615	0/0:14,0:15:36.57:0,37,569	0/0:26,0:26:63.19:0,63,1147	1/1:2,21:23:48.14:606,48,0	0/0:18,0:19:45.15:0,45,841	0/0:19,0:19:51.17:0,51,965	0/0:18,0:22:52.37:0,52,902	0/1:28,0:28:33.12:250,0,33	1/1:20,0:20:36.17:338,36,0	1/1:7,0:7:2.93:44,3,0	1/1:7,12:18:33.07:410,33,0	0/0:20,0:20:41.51:0,42,774	0/0:16,0:15:36.12:0,36,698	0/0:17,0:18:50.89:0,51,910	1/1:6,19:26:11.83:658,12,0	1/1:23,0:23:35.54:328,36,0	1/1:2,19:21:21.01:471,21,0
chr10	104112272	.	A	AG	776.60	PASS	AB=0.855;AC=6;AF=0.107;AN=56;BaseQRankSum=10.607;DP=665;FS=3.691;HRun=0;HaplotypeScore=118.7372;InbreedingCoeff=0.3026;MQ=62.93;MQ0=13;MQRankSum=-9.172;QD=7.33;ReadPosRankSum=-1.325;VQSLOD=2.9367;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.03:0,84,974	0/0:14,0:14:42.06:0,42,516	0/0:65,0:26:29.34:0,29,284	0/0:62,0:18:18.19:0,18,232	0/0:26,0:26:56.18:0,56,325	0/0:26,0:26:73.72:0,74,899	0/0:24,0:24:61.73:0,62,749	0/1:21,3:25:99:139,0,142	0/0:24,0:24:67.78:0,68,834	0/0:20,0:19:54.13:0,54,703	0/0:16,0:16:44.28:0,44,503	0/0:13,0:13:39.06:0,39,482	0/0:18,0:18:47.18:0,47,509	0/0:23,0:23:66.16:0,66,863	0/0:22,0:22:47.77:0,48,239	0/0:17,0:17:48.04:0,48,613	0/0:19,0:19:54.17:0,54,732	0/0:23,0:23:65.95:0,66,753	0/1:21,8:29:75.23:354,0,75	0/1:16,3:19:15.30:184,0,15	0/1:9,1:10:4.65:86,0,5	0/0:17,0:16:25.65:0,26,184	0/0:18,0:18:47.55:0,48,598	0/0:17,0:16:45.09:0,45,570	0/0:20,0:20:59.86:0,60,739	0/0:24,0:24:42.51:0,43,346	1/1:22,1:23:9.18:138,9,0	0/0:20,0:20:39.37:0,39,199
chr10	104112276	.	GAA	G	2446.09	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.428;DP=638;FS=3.206;HRun=12;HaplotypeScore=122.0385;InbreedingCoeff=0.9931;MQ=62.27;MQ0=10;MQRankSum=-10.088;QD=22.65;ReadPosRankSum=-3.285;VQSLOD=2.1535;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:67.22:0,67,1128	0/0:14,0:14:42.14:0,42,725	0/0:53,0:22:40.82:0,41,439	0/0:52,1:17:21.47:0,21,416	0/0:27,0:27:75.99:0,76,677	0/0:24,0:24:71.46:0,71,1212	0/0:23,0:23:63.20:0,63,1053	1/1:7,19:26:67.09:758,67,0	0/0:22,0:22:66.21:0,66,1132	0/0:18,0:17:48.16:0,48,837	0/0:13,0:13:38.97:0,39,614	0/0:13,0:13:39.13:0,39,692	0/0:16,0:16:42.06:0,42,693	0/0:22,0:22:63.22:0,63,1104	0/0:22,0:22:50.80:0,51,452	0/0:17,0:17:51.13:0,51,867	0/0:21,0:21:57.18:0,57,977	0/0:22,0:22:66.19:0,66,1089	1/1:11,19:30:51.47:689,51,0	1/1:5,14:19:50.79:560,51,0	1/1:1,9:10:12.88:120,13,0	0/0:18,0:17:42.80:0,43,437	0/0:18,0:18:51.15:0,51,879	0/0:18,0:17:48.16:0,48,840	0/0:20,0:20:57.19:0,57,1003	0/0:25,0:25:71.90:0,72,730	1/1:4,19:23:45.35:493,45,0	0/0:20,0:20:41.86:0,42,341
chr10	104113344	.	G	GA	454.03	PASS	AB=0.922;AC=12;AF=0.240;AN=50;BaseQRankSum=1.237;DP=443;FS=3.042;HRun=11;HaplotypeScore=109.6857;InbreedingCoeff=0.3259;MQ=39.00;MQ0=38;MQRankSum=-1.374;QD=2.75;ReadPosRankSum=-2.340;VQSLOD=0.1461;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:34:35.13:0,35,269	0/0:6,0:5:14.94:0,15,116	./.	./.	0/0:15,0:12:8.95:0,9,70	0/0:13,0:14:10.93:0,11,75	0/0:19,0:17:26.77:0,27,208	1/1:17,9:24:6.87:229,7,0	0/0:12,0:11:2.51:0,3,23	0/1:22,1:21:16.15:16,0,77	0/0:14,0:14:11.39:0,11,78	0/0:11,0:12:16.85:0,17,120	0/1:11,0:10:0:0,0,0	0/0:14,0:14:17.77:0,18,139	0/0:15,1:15:19.60:0,20,142	0/0:19,0:20:24.68:0,25,174	0/0:31,0:24:20.30:0,20,149	0/1:23,0:20:17.52:18,0,112	0/1:15,5:17:5.26:120,0,5	1/1:7,5:13:12.90:87,13,0	./.	0/0:10,0:10:5.86:0,6,46	0/0:7,0:6:8.96:0,9,69	0/0:20,0:18:20.57:0,21,162	1/1:8,3:8:5.99:54,6,0	0/0:16,0:16:20.66:0,21,154	0/1:12,4:14:26.11:65,0,26	0/1:19,0:13:10.09:10,0,15
chr10	104114569	.	CCGGGGGGGGGAGT	C	1464.53	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=5.941;DP=356;FS=3.876;HRun=0;HaplotypeScore=150.8187;InbreedingCoeff=0.8703;MQ=67.90;MQ0=0;MQRankSum=-5.247;QD=58.58;ReadPosRankSum=4.665;VQSLOD=3.2749;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:28.34:0,28,1294	0/0:9,0:9:27.05:0,27,1318	0/0:18,0:12:29.65:0,30,1039	0/0:19,0:16:34.47:0,34,1121	1/1:3,2:5:6.02:193,6,0	0/0:15,0:15:33.11:0,33,1625	0/0:27,0:26:71.37:0,71,3575	0/0:15,0:15:45.15:0,45,2021	0/0:14,0:15:42.14:0,42,2244	0/0:12,0:12:30.10:0,30,1264	0/0:7,0:7:21.07:0,21,1029	0/0:12,0:12:33.11:0,33,1914	0/0:9,0:9:25.64:0,26,1153	0/0:14,0:14:32.38:0,32,1485	1/1:7,7:14:24.08:923,24,0	0/0:8,0:8:18.06:0,18,988	0/0:24,0:24:54.19:0,54,3019	0/0:15,0:21:37.89:0,38,1806	0/0:5,0:5:12.04:0,12,592	0/0:15,0:15:45.13:0,45,2062	0/0:16,0:16:48.16:0,48,2288	0/0:5,0:5:0.89:0,1,2	0/0:5,0:5:12.04:0,12,473	0/0:19,0:19:54.14:0,54,2494	0/0:12,0:12:18.06:0,18,803	./.	0/0:14,0:13:33.11:0,33,1747	1/1:2,4:6:12.04:478,12,0
chr10	104114587	.	ACATCAGGAACTG	A	1070.18	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=6.116;DP=380;FS=7.742;HRun=0;HaplotypeScore=167.6885;InbreedingCoeff=0.9446;MQ=67.40;MQ0=0;MQRankSum=-5.641;QD=82.32;ReadPosRankSum=5.288;VQSLOD=2.9065;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:53.97:0,54,3259	0/0:8,0:8:24.08:0,24,1403	0/0:15,0:13:36.09:0,36,1475	0/0:20,0:18:48.10:0,48,2511	1/1:0,2:2:6.02:152,6,0	0/0:12,0:12:36.12:0,36,2161	0/0:23,0:22:66.23:0,66,3551	0/0:18,0:18:54.13:0,54,2499	0/0:14,0:14:42.14:0,42,2350	0/0:14,0:14:39.09:0,39,2146	0/0:10,0:10:24.08:0,24,1521	0/0:13,0:13:39.09:0,39,2183	0/0:14,0:14:39.13:0,39,2367	0/0:17,0:17:46.04:0,46,2861	1/1:0,6:7:21.07:659,21,0	0/0:11,0:11:30.10:0,30,1898	0/0:30,0:30:75.26:0,75,4625	0/0:23,0:23:48.16:0,48,2926	0/0:8,0:8:24.08:0,24,1153	0/0:21,0:21:63.22:0,63,3378	0/0:15,0:15:45.15:0,45,2310	./.	0/0:15,0:15:30.10:0,30,1792	0/0:22,0:22:66.23:0,66,4107	0/0:10,0:10:27.09:0,27,1457	./.	0/0:13,0:12:36.08:0,36,1590	1/1:0,4:4:12.04:388,12,0
chr10	104114601	.	ATT	A	186.41	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=5.897;DP=411;FS=8.548;HRun=2;HaplotypeScore=91.6587;InbreedingCoeff=0.9240;MQ=66.60;MQ0=0;MQRankSum=-5.540;QD=14.34;ReadPosRankSum=5.082;VQSLOD=0.6067;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:60.17:0,60,1168	0/0:13,0:13:39.11:0,39,725	0/0:11,0:11:29.87:0,30,522	0/0:20,0:19:51.16:0,51,890	1/1:0,2:2:3.47:26,3,0	0/0:14,0:14:39.09:0,39,750	0/0:22,0:21:66.14:0,66,1249	0/0:24,0:24:69.22:0,69,1328	0/0:13,0:13:39.13:0,39,779	0/0:15,0:15:45.15:0,45,915	0/0:14,0:14:39.11:0,39,752	0/0:12,0:12:36.12:0,36,731	0/0:17,0:17:51.16:0,51,998	0/0:19,0:19:57.18:0,57,1121	1/1:1,6:7:20.93:178,21,0	0/0:14,0:14:42.04:0,42,761	0/0:34,0:34:90.31:0,90,1783	0/0:20,0:20:48.16:0,48,975	0/0:12,0:11:33.10:0,33,612	0/0:24,0:24:72.23:0,72,1426	0/0:17,0:17:51.12:0,51,886	./.	0/0:16,0:16:36.59:0,37,732	0/0:22,0:22:66.20:0,66,1290	0/0:12,0:12:33.11:0,33,660	./.	0/0:11,0:10:30.10:0,30,608	1/1:0,4:4:12.01:108,12,0
chr10	104114606	.	AGGG	A	593.35	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=6.214;DP=413;FS=5.338;HRun=3;HaplotypeScore=96.9078;InbreedingCoeff=0.9465;MQ=66.79;MQ0=0;MQRankSum=-5.455;QD=42.38;ReadPosRankSum=3.445;VQSLOD=3.0240;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.70:0,67,1621	0/0:15,0:15:45.15:0,45,1109	0/0:13,0:12:20.48:0,20,686	0/0:15,0:15:45.13:0,45,963	1/1:0,2:2:6.01:81,6,0	0/0:12,0:12:33.11:0,33,814	0/0:20,0:19:60.18:0,60,1427	0/0:22,0:22:66.23:0,66,1588	0/0:14,0:14:42.14:0,42,1012	0/0:16,0:16:48.15:0,48,1133	0/0:15,0:15:42.14:0,42,1020	0/0:14,0:14:42.14:0,42,1034	0/0:17,0:17:51.18:0,51,1252	0/0:17,0:17:51.18:0,51,1257	1/1:1,7:8:24.08:424,24,0	0/0:13,0:13:39.09:0,39,775	0/0:33,0:33:87.30:0,87,2075	0/0:22,0:22:54.19:0,54,1288	0/0:14,0:13:39.11:0,39,862	0/0:25,0:25:75.24:0,75,1799	0/0:17,0:17:48.16:0,48,1179	./.	0/0:15,0:15:45.15:0,45,1083	0/0:21,0:21:63.22:0,63,1521	0/0:14,0:14:39.13:0,39,960	./.	0/0:12,0:11:33.11:0,33,794	1/1:0,4:4:12.04:218,12,0
chr10	104115317	.	T	TA	4695.69	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=0.841;DP=543;FS=5.206;HRun=3;HaplotypeScore=60.5129;InbreedingCoeff=0.8486;MQ=71.41;MQ0=9;MQRankSum=2.325;QD=19.48;ReadPosRankSum=-2.085;VQSLOD=3.9781;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.08:0,78,870	0/0:14,0:14:39.09:0,39,442	0/1:39,0:8:16.83:17,0,50	0/1:28,0:11:17.55:18,0,33	1/1:2,21:23:59.98:683,60,0	0/0:12,0:12:33.08:0,33,373	0/0:24,0:24:66.11:0,66,710	1/1:3,27:30:80.49:881,80,0	0/0:21,0:21:63.15:0,63,711	0/0:16,0:16:33.07:0,33,372	0/0:16,0:16:33.39:0,33,392	0/0:17,0:17:45.04:0,45,504	0/0:24,0:24:69.16:0,69,776	0/0:17,0:17:47.96:0,48,501	1/1:1,11:12:30.10:382,30,0	0/0:17,0:16:45.05:0,45,497	0/0:17,0:17:47.34:0,47,530	0/0:23,0:23:65.67:0,66,747	1/1:4,14:19:46.51:415,47,0	1/1:2,14:18:42.05:481,42,0	1/1:0,14:14:15.05:188,15,0	1/1:3,6:9:21.54:269,22,0	0/0:13,0:13:33.08:0,33,379	0/0:18,0:18:48.39:0,48,549	0/0:24,0:24:60.04:0,60,670	1/1:1,22:23:63.15:751,63,0	1/1:5,13:18:30.10:382,30,0	1/1:0,8:8:18.06:229,18,0
chr10	104115799	.	CA	C	2718.44	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.035;DP=590;FS=5.557;HRun=4;HaplotypeScore=60.6499;InbreedingCoeff=0.9983;MQ=72.28;MQ0=0;MQRankSum=-0.634;QD=27.74;ReadPosRankSum=-1.132;VQSLOD=2.5118;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1404	0/0:14,0:14:39.13:0,39,545	0/0:17,0:17:33.06:0,33,442	0/0:22,0:17:22.95:0,23,390	0/0:16,0:16:39.12:0,39,527	0/0:22,0:22:66.21:0,66,905	0/0:24,0:24:63.20:0,63,863	1/1:4,21:25:60.16:705,60,0	0/0:17,0:17:45.15:0,45,628	0/0:29,0:29:69.23:0,69,953	0/0:22,0:22:63.18:0,63,846	0/0:22,0:22:63.20:0,63,867	0/0:18,0:18:54.17:0,54,739	0/0:13,0:13:36.12:0,36,504	0/0:30,0:30:90.28:0,90,1223	0/0:20,0:20:57.19:0,57,796	0/0:33,0:33:96.24:0,96,1269	0/0:26,0:26:72.22:0,72,971	1/1:1,15:16:45.14:535,45,0	1/1:2,17:19:39.12:466,39,0	1/1:1,16:17:42.13:504,42,0	0/0:13,0:13:36.12:0,36,503	0/0:19,0:19:57.19:0,57,797	0/0:25,0:25:69.23:0,69,965	0/0:14,0:14:42.14:0,42,587	0/0:34,0:34:99:0,99,1370	1/1:0,21:21:57.17:684,57,0	0/0:7,0:7:21.07:0,21,294
chr10	104116585	.	G	GGGCT	3814.16	PASS	AB=0.806;AC=19;AF=0.339;AN=56;BaseQRankSum=-0.278;DP=540;FS=9.824;HRun=0;HaplotypeScore=95.4562;InbreedingCoeff=0.8577;MQ=76.47;MQ0=0;MQRankSum=-5.209;QD=21.31;ReadPosRankSum=0.503;VQSLOD=2.8694;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:39.13:0,39,628	0/0:7,0:7:15.05:0,15,239	0/0:23,0:22:30.52:0,31,422	0/0:25,0:25:21.07:0,21,337	1/1:10,5:16:21.07:488,21,0	0/0:24,0:24:45.15:0,45,722	0/0:22,0:22:42.14:0,42,677	1/1:26,0:26:9.49:148,9,0	0/0:22,0:22:54.18:0,54,871	0/0:20,0:20:15.05:0,15,243	0/0:12,0:12:15.05:0,15,242	0/0:19,0:19:48.16:0,48,778	0/0:15,0:15:27.09:0,27,438	0/0:24,0:24:51.17:0,51,820	1/1:3,11:17:30.10:725,30,0	0/0:15,0:15:39.13:0,39,628	0/0:32,0:32:72.25:0,72,1167	0/0:16,0:16:33.11:0,33,535	1/1:10,0:13:8.99:125,9,0	1/1:13,0:15:9.03:157,9,0	1/1:13,0:16:3.56:54,4,0	1/1:15,8:23:27.09:627,27,0	0/0:11,0:11:12.04:0,12,195	0/0:27,0:27:54.17:0,54,851	0/0:16,0:16:12.02:0,12,157	0/1:22,7:29:8.63:544,0,9	1/1:7,0:15:33.11:583,33,0	1/1:3,5:8:15.05:363,15,0
chr10	104117684	.	CGT	C	91.51	PASS	AB=0.950;AC=16;AF=0.400;AN=40;BaseQRankSum=4.373;DP=464;FS=6.180;HRun=0;HaplotypeScore=61.6601;InbreedingCoeff=0.0962;MQ=54.50;MQ0=13;MQRankSum=-3.095;QD=0.46;ReadPosRankSum=2.600;VQSLOD=0.7171;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,1:23:22.88:23,0,50	./.	./.	./.	0/1:11,0:11:0:0,0,0	0/0:18,0:17:6.02:0,6,85	0/0:22,0:22:9.01:0,9,101	./.	0/0:15,0:14:9.03:0,9,130	0/0:15,0:15:6.02:0,6,77	0/0:13,0:13:9.02:0,9,109	0/1:21,0:21:17.88:18,0,72	0/0:13,0:13:6:0,6,59	0/1:12,1:13:7.62:8,0,118	1/1:10,0:14:8.52:42,9,0	0/1:15,2:16:16.52:17,0,125	0/1:24,2:26:19.51:20,0,98	0/1:27,1:26:36.25:36,0,219	./.	./.	./.	./.	0/0:10,0:10:5.86:0,6,87	0/0:20,0:19:18.06:0,18,250	1/1:4,0:5:2.84:14,3,0	0/1:19,0:18:0:0,0,0	1/1:9,0:10:5.27:27,5,0	1/1:10,0:11:2.84:14,3,0
chr10	104118341	.	GCTGGCCATCCTGTGATGACTCCCCA	G	18586.66	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.573;DP=635;FS=9.455;HRun=0;HaplotypeScore=420.0297;InbreedingCoeff=0.9424;MQ=92.22;MQ0=0;MQRankSum=-14.217;QD=109.98;ReadPosRankSum=5.807;VQSLOD=3.4973;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.32:0,93,9355	0/0:12,0:12:33.11:0,33,3848	0/0:24,0:24:66.23:0,66,3786	0/0:36,0:36:99:0,99,6682	1/1:4,15:19:39.13:2647,39,0	0/0:22,0:22:63.22:0,63,6408	0/0:36,0:36:99:0,105,10688	1/1:14,0:14:3.01:47,3,0	0/0:23,0:23:69.24:0,69,6788	0/0:25,0:25:72.25:0,72,6836	0/0:19,0:19:57.18:0,57,5501	0/0:26,0:26:75.24:0,75,7179	0/0:23,0:23:63.22:0,63,5810	0/0:28,0:28:84.29:0,84,8731	1/1:5,14:19:33.11:2240,33,0	0/0:19,0:19:57.20:0,57,5603	0/0:45,0:45:99:0,135,14261	0/0:35,0:35:96.33:0,96,9131	1/1:10,11:21:30.06:1675,30,0	1/1:6,15:21:42.14:2666,42,0	1/1:5,2:7:3.01:204,3,0	1/1:5,15:20:38.99:2647,39,0	0/0:14,0:14:39.12:0,39,3197	0/0:28,0:28:84.29:0,84,8864	0/0:18,0:18:54.18:0,54,5312	1/1:5,15:20:45.15:3027,45,0	1/1:4,18:22:48.16:3258,48,0	1/1:6,0:6:12.04:174,12,0
chr10	104119386	.	TA	T	3233.06	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.070;DP=713;FS=8.294;HRun=3;HaplotypeScore=73.6232;InbreedingCoeff=0.9999;MQ=95.33;MQ0=0;MQRankSum=-3.258;QD=31.70;ReadPosRankSum=1.093;VQSLOD=3.6058;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,181,2571	0/0:14,0:14:39.12:0,39,543	0/0:32,0:32:93.30:0,93,1302	0/0:35,1:36:67.32:0,67,1304	1/1:1,20:21:54.17:669,54,0	0/0:21,0:21:60.20:0,60,864	0/0:17,0:17:48.16:0,48,690	0/0:27,0:27:78.25:0,78,1093	0/0:20,0:20:54.17:0,54,752	0/0:30,0:30:87.29:0,87,1252	0/0:21,0:21:60.20:0,60,864	0/0:26,0:26:78.26:0,78,1123	0/0:23,0:23:66.20:0,66,918	0/0:20,0:20:60.20:0,60,861	1/1:1,26:27:72.23:893,72,0	0/0:32,0:32:93.31:0,93,1339	0/0:29,0:29:87.28:0,87,1232	0/0:24,0:24:66.18:0,66,908	0/0:19,0:19:54.13:0,54,737	0/0:25,0:25:69.22:0,69,977	0/0:36,0:36:99:0,108,1534	1/1:0,17:17:39.12:484,39,0	0/0:22,0:22:66.21:0,66,932	0/0:39,0:38:99:0,114,1640	0/0:12,0:12:33.11:0,33,475	1/1:0,25:25:75.22:918,75,0	0/0:25,0:25:75.23:0,75,1042	1/1:0,12:12:36.11:446,36,0
chr10	104120918	.	CTT	C	983.71	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=3.464;DP=596;FS=2.591;HRun=15;HaplotypeScore=84.8718;InbreedingCoeff=0.7450;MQ=75.00;MQ0=4;MQRankSum=-0.056;QD=7.93;ReadPosRankSum=3.516;VQSLOD=1.2874;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.14:0,81,969	0/0:11,0:12:26.54:0,27,301	0/0:33,1:19:3.42:0,3,229	0/1:24,0:16:13.33:13,0,121	1/1:13,9:23:11.53:171,12,0	0/0:19,0:22:56.62:0,57,671	0/0:20,0:22:53.62:0,54,659	0/0:32,0:35:75.83:0,76,840	0/0:16,0:16:36.10:0,36,467	0/0:20,0:22:46.60:0,47,529	0/0:9,0:11:27.54:0,28,208	0/0:16,0:16:41.53:0,42,450	0/0:21,0:25:59.21:0,59,747	0/0:20,0:21:49.39:0,49,538	1/1:5,19:24:38.91:339,39,0	0/0:14,0:16:41.03:0,41,437	0/0:35,0:37:88.34:0,88,968	0/0:17,0:20:50.10:0,50,567	0/0:16,0:17:35.87:0,36,413	0/0:20,0:20:45.02:0,45,536	0/0:12,0:13:23.41:0,23,260	1/1:6,10:18:14.19:159,14,0	0/0:14,0:15:38.58:0,39,443	0/0:28,0:31:71.13:0,71,847	0/0:20,0:21:50.12:0,50,600	1/1:5,19:24:1.33:343,1,0	0/0:12,0:13:20.55:0,21,251	1/1:0,9:11:2.72:115,3,0
chr10	104123492	.	CTCTG	C	2838.08	PASS	AB=1.000;AC=47;AF=0.979;AN=48;BaseQRankSum=-1.554;DP=528;FS=3.485;HRun=0;HaplotypeScore=99.0036;InbreedingCoeff=0.0795;MQ=70.30;MQ0=16;MQRankSum=1.466;QD=6.66;ReadPosRankSum=0.785;VQSLOD=1.6499;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:3.89:38,4,0	1/1:7,0:6:8.89:62,9,0	./.	./.	1/1:10,0:9:2.94:18,3,0	1/1:20,0:19:9.01:84,9,0	1/1:23,0:22:23.94:195,24,0	0/1:20,0:20:0:0,0,0	1/1:17,0:17:5.62:51,6,0	1/1:9,7:15:21:201,21,0	./.	1/1:19,1:20:23.93:214,24,0	1/1:23,0:22:9.03:106,9,0	1/1:14,0:14:26.89:216,27,0	1/1:22,0:22:17.98:149,18,0	1/1:14,0:14:18.01:191,18,0	1/1:19,0:19:29.86:230,30,0	1/1:24,0:23:3.77:259,4,0	1/1:20,0:20:3:28,3,0	1/1:9,0:9:2.97:20,3,0	./.	1/1:12,0:11:5.99:50,6,0	1/1:8,0:8:8.95:69,9,0	1/1:32,0:32:35.79:332,36,0	1/1:15,0:15:3:28,3,0	1/1:15,0:13:8.96:70,9,0	1/1:9,0:9:3:26,3,0	1/1:21,0:21:35.87:280,36,0
chr10	104123520	.	GTCTGTCTGTCTGTCTGTCTCTC	G	1352.67	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=3.239;DP=469;FS=4.612;HRun=0;HaplotypeScore=205.1657;InbreedingCoeff=0.4993;MQ=48.48;MQ0=32;MQRankSum=-2.977;QD=12.64;ReadPosRankSum=-3.318;VQSLOD=2.0684;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:11.69:0,12,209	0/0:6,0:5:11.65:0,12,176	0/0:17,0:5:2.17:0,2,67	0/0:16,0:4:3.01:0,3,32	0/0:7,0:4:5.96:0,6,44	0/0:12,0:11:5.35:0,5,91	0/0:30,0:27:25.60:0,26,453	1/1:22,0:22:20.50:341,20,0	0/0:20,0:18:15.87:0,16,217	0/0:14,0:13:39.10:0,39,1112	0/0:7,0:5:3.01:0,3,204	0/0:17,0:17:45.13:0,45,1553	0/0:18,0:17:14.75:0,15,377	0/0:16,0:15:41.85:0,42,1230	0/0:17,0:17:4.55:0,5,234	0/0:17,0:15:39.12:0,39,1750	0/0:24,0:24:55.93:0,56,1298	0/0:23,0:21:24.45:0,24,1474	1/1:5,11:15:32.79:692,33,0	1/1:8,0:8:13.25:220,13,0	./.	1/1:10,0:9:1.77:4,2,0	0/0:13,0:11:11.64:0,12,218	0/0:40,0:40:89.53:0,90,2195	0/1:14,0:13:0.16:0,0,151	0/1:14,0:12:60.70:61,0,299	1/1:0,9:9:3.01:179,3,0	0/1:14,0:14:5.55:6,0,343
chr10	104123528	.	GTCTGTCTGTCTC	G	3409.12	PASS	AB=1.000;AC=33;AF=0.660;AN=50;BaseQRankSum=-0.916;DP=455;FS=14.331;HRun=0;HaplotypeScore=135.7589;InbreedingCoeff=0.3730;MQ=47.45;MQ0=31;MQRankSum=-0.290;QD=10.21;ReadPosRankSum=-1.514;VQSLOD=1.5559;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:33:4.04:16,4,0	0/0:6,0:5:1.12:0,1,4	./.	./.	1/1:7,0:4:3.01:36,3,0	1/1:0,13:14:9.03:314,9,0	1/1:28,0:25:57.35:624,57,0	1/1:17,0:17:11.55:79,12,0	1/1:19,0:17:6.05:118,6,0	0/0:13,0:13:17.27:0,17,259	0/0:9,0:7:6.01:0,6,95	0/0:16,0:16:23.50:0,24,316	1/1:16,0:15:8.09:66,8,0	0/1:15,0:14:9.94:10,0,104	1/1:18,0:18:23.83:328,24,0	0/0:18,0:16:35.48:0,35,620	0/1:21,0:21:62.97:87,0,63	0/1:20,0:18:99:262,0,223	1/1:18,0:17:15.73:225,16,0	1/1:7,0:7:7.72:68,8,0	./.	1/1:9,0:8:6.02:100,6,0	0/0:14,0:12:1.22:0,1,16	0/1:40,0:40:99:216,0,131	0/1:15,0:14:0.35:0,0,5	1/1:13,0:12:21.55:199,22,0	1/1:9,0:9:3.01:81,3,0	1/1:13,0:13:39.08:581,39,0
chr10	104123532	.	GTCTGTCTC	G	4276.27	PASS	AB=0.827;AC=42;AF=0.808;AN=52;BaseQRankSum=-1.807;DP=457;FS=7.966;HRun=0;HaplotypeScore=108.8889;InbreedingCoeff=0.0786;MQ=47.15;MQ0=34;MQRankSum=-0.194;QD=10.61;ReadPosRankSum=-1.701;VQSLOD=2.7445;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:3,34:36:1.89:78,0,2	1/1:5,0:4:8.89:62,9,0	./.	0/0:16,0:1:3:0,3,27	1/1:7,0:5:2.94:18,3,0	1/1:16,0:14:9.03:184,9,0	1/1:28,0:25:48.95:386,49,0	1/1:17,0:17:11.52:73,12,0	1/1:7,0:15:8.79:104,9,0	0/1:13,0:13:95.95:107,0,96	0/0:10,0:8:5.99:0,6,50	0/1:16,0:16:99:129,0,117	1/1:2,14:15:8.88:229,9,0	1/1:16,0:15:38.90:364,39,0	1/1:18,0:18:19.27:150,19,0	0/1:17,0:15:54.80:55,0,272	1/1:20,0:20:33.47:399,33,0	0/1:17,1:17:56.96:371,0,57	1/1:18,0:17:4.01:117,4,0	1/1:8,0:7:4.10:23,4,0	./.	1/1:9,0:8:5.99:50,6,0	1/1:16,0:14:8.95:69,9,0	1/1:36,2:38:74.05:743,74,0	0/1:2,13:14:3.79:70,0,4	1/1:13,0:11:20.65:143,21,0	1/1:9,0:9:3.01:53,3,0	1/1:13,0:13:38.82:299,39,0
chr10	104123536	.	GTC	G	463.02	PASS	AB=0.868;AC=28;AF=0.560;AN=50;BaseQRankSum=6.421;DP=460;FS=0.000;HRun=0;HaplotypeScore=96.0313;InbreedingCoeff=0.3748;MQ=47.50;MQ0=31;MQRankSum=-4.305;QD=1.54;ReadPosRankSum=3.290;VQSLOD=1.2640;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:37:2.84:14,3,0	0/1:4,2:5:0:0,0,0	./.	0/0:9,0:1:3.01:0,3,36	0/0:7,1:6:0:0,0,0	1/1:16,0:14:8.39:40,8,0	0/0:25,1:23:20.46:0,20,82	1/1:13,0:16:11.97:123,12,0	0/1:17,1:15:4.45:4,0,10	0/0:17,0:17:26.69:0,27,310	0/0:11,0:9:9.03:0,9,121	0/1:15,1:16:19.08:19,0,116	1/1:17,0:15:8.59:51,9,0	0/0:15,1:15:8.22:0,8,34	1/1:10,7:17:0.23:1,0,0	0/0:17,1:16:26.36:0,26,325	0/0:21,0:20:23.65:0,24,105	0/1:18,0:17:10.85:11,0,54	1/1:18,0:17:2.60:101,3,0	1/1:5,2:6:2.88:29,3,0	./.	./.	0/1:8,0:16:0.14:0,0,0	0/1:40,1:41:20.72:21,0,141	1/1:15,1:15:5.05:40,5,0	1/1:9,5:12:14.95:142,15,0	1/1:9,0:9:2.74:12,3,0	1/1:13,0:13:2.04:6,2,0
chr10	104123542	.	C	CTG	289.79	PASS	AB=0.940;AC=6;AF=0.115;AN=52;BaseQRankSum=2.778;DP=498;FS=0.000;HRun=0;HaplotypeScore=110.1564;InbreedingCoeff=-0.1442;MQ=46.73;MQ0=36;MQRankSum=-3.369;QD=2.76;ReadPosRankSum=-1.054;VQSLOD=2.2151;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:39:2.94:0,3,18	0/0:6,0:5:2.56:0,3,10	./.	0/0:12,0:1:3.01:0,3,46	0/0:8,0:6:2.83:0,3,18	0/0:19,0:17:11.61:0,12,69	0/0:26,0:23:39.82:0,40,442	0/1:23,0:22:99:125,0,169	0/1:19,0:16:3.36:3,0,78	0/0:18,0:17:42.02:0,42,491	0/0:13,0:10:9.03:0,9,127	0/0:15,0:15:30.92:0,31,352	0/1:18,0:16:19.22:19,0,27	0/0:18,0:17:29.84:0,30,301	0/0:18,0:17:12.93:0,13,101	0/0:21,0:19:47.59:0,48,608	0/0:20,0:19:41.91:0,42,457	0/0:23,0:20:50.38:0,50,394	0/1:21,0:19:77.79:78,0,133	0/1:4,5:8:11.13:46,0,11	./.	0/0:11,0:10:3:0,3,25	0/0:15,0:14:5.99:0,6,49	0/0:44,0:44:56.57:0,57,843	0/0:19,0:18:11.80:0,12,80	0/1:15,0:13:73.01:132,0,73	0/0:12,0:11:4.61:0,5,18	0/0:9,0:9:16.77:0,17,155
chr10	104123570	.	CAA	C	243.27	PASS	AB=1.000;AC=8;AF=0.148;AN=54;BaseQRankSum=4.361;DP=531;FS=0.746;HRun=3;HaplotypeScore=99.9764;InbreedingCoeff=0.4978;MQ=43.32;MQ0=56;MQRankSum=-3.130;QD=3.38;ReadPosRankSum=1.638;VQSLOD=-0.4902;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:14.74:0,15,142	0/0:6,0:5:8.47:0,8,114	0/0:41,0:2:6.02:0,6,88	0/0:44,0:2:2.80:0,3,13	0/0:4,0:4:0:0,0,0	0/1:17,0:15:1.26:1,0,59	0/0:25,0:22:46.47:0,46,648	0/0:19,0:17:41.50:0,41,607	0/0:16,0:11:16.45:0,16,161	0/0:15,0:14:14.27:0,14,656	0/0:11,0:9:7.19:0,7,200	0/0:12,0:12:23.56:0,24,284	0/0:16,0:13:20.21:0,20,130	0/0:16,0:13:33.48:0,33,461	1/1:16,0:15:4.94:32,5,0	0/0:24,0:20:44.85:0,45,636	0/0:25,0:24:59.74:0,60,790	0/0:23,0:20:52.26:0,52,615	0/0:15,0:13:10.47:0,10,326	0/0:11,0:10:7.71:0,8,80	0/0:20,0:16:9.03:0,9,139	./.	0/0:14,0:12:3.01:0,3,51	0/0:45,0:44:52.38:0,52,967	0/1:17,0:16:12.16:12,0,88	1/1:16,1:14:34.14:234,34,0	0/0:12,0:10:2.91:0,3,45	1/1:3,2:4:8.97:94,9,0
chr10	104123572	.	AAC	A	406.60	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=4.720;DP=535;FS=1.681;HRun=0;HaplotypeScore=100.4704;InbreedingCoeff=0.7560;MQ=43.36;MQ0=56;MQRankSum=-4.340;QD=10.70;ReadPosRankSum=1.687;VQSLOD=3.3311;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:19.49:0,19,169	0/0:6,0:5:11.97:0,12,133	0/0:41,0:2:6.01:0,6,71	./.	0/0:4,0:4:0:0,0,0	0/0:18,0:16:18.70:0,19,150	0/0:27,0:25:51:0,51,719	0/0:20,0:18:42.06:0,42,627	0/0:16,0:11:13.85:0,14,169	0/0:15,0:14:33.66:0,34,642	0/0:11,0:9:14.62:0,15,194	0/0:13,0:12:29.59:0,30,320	0/0:18,0:14:23.01:0,23,229	0/0:16,0:13:32.68:0,33,494	1/1:11,5:15:9.16:77,9,0	0/0:23,0:19:41.68:0,42,564	0/0:26,0:25:55.29:0,55,887	0/0:24,0:21:53.24:0,53,665	0/0:16,0:13:29.47:0,29,404	0/0:11,0:10:11.24:0,11,134	0/0:17,0:14:9.03:0,9,142	./.	0/0:12,0:11:3:0,3,54	0/0:45,0:44:80.59:0,81,1061	0/0:17,0:16:7.09:0,7,136	1/1:8,9:14:36.04:385,36,0	0/0:12,0:10:16.31:0,16,133	1/1:5,0:4:8.96:73,9,0
chr10	104123575	.	ACACCACACACAC	A	1294.45	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.400;DP=532;FS=3.604;HRun=0;HaplotypeScore=149.1479;InbreedingCoeff=0.7268;MQ=43.93;MQ0=53;MQRankSum=-7.303;QD=25.89;ReadPosRankSum=-1.952;VQSLOD=2.6280;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:22.77:0,23,791	0/0:6,0:5:12.04:0,12,420	0/0:39,0:2:6.02:0,6,112	0/0:42,0:2:2.97:0,3,20	0/0:1,2:4:0:0,0,0	0/0:18,0:16:21.35:0,21,671	0/0:26,0:26:58.44:0,58,1976	0/0:20,0:19:54.61:0,55,1180	0/0:16,0:11:13.86:0,14,579	0/0:15,0:14:21.41:0,21,1248	0/0:10,0:8:12.47:0,12,484	0/0:13,0:12:3.45:0,3,504	0/0:18,0:14:23.80:0,24,665	0/0:16,0:13:32.87:0,33,1532	1/1:7,6:15:30.16:572,30,0	0/0:22,0:19:51.17:0,51,1530	0/0:27,0:26:47.16:0,47,2745	0/0:24,0:21:55.42:0,55,2046	0/0:17,0:14:34.02:0,34,1183	0/0:11,0:10:10.74:0,11,395	0/0:18,0:15:8.84:0,9,375	1/1:7,4:10:3.01:39,3,0	0/0:13,0:12:5.58:0,6,349	0/0:45,0:44:95.17:0,95,3777	0/0:16,0:15:20.43:0,20,984	1/1:14,2:14:36.08:575,36,0	0/0:13,0:11:19.62:0,20,908	1/1:3,2:4:9.02:252,9,0
chr10	104123578	.	CCA	C	316.76	PASS	AB=0.962;AC=16;AF=0.320;AN=50;BaseQRankSum=4.086;DP=544;FS=16.843;HRun=0;HaplotypeScore=101.6860;InbreedingCoeff=-0.0751;MQ=44.19;MQ0=54;MQRankSum=-1.121;QD=1.15;ReadPosRankSum=-1.485;VQSLOD=0.7196;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,1:32:52.49:52,0,77	0/0:5,1:5:6.01:0,6,61	./.	./.	0/0:5,0:5:0:0,0,0	0/1:19,0:17:17.71:18,0,101	0/1:24,0:25:46.93:47,0,154	0/0:18,0:17:2.98:0,3,21	0/0:16,0:13:8.99:0,9,77	0/0:16,0:14:8.99:0,9,92	0/1:11,0:9:27.66:28,0,29	0/1:14,0:14:13.08:17,0,13	0/1:18,0:14:23.51:24,0,77	0/0:16,0:13:20.86:0,21,247	1/1:16,0:15:8.46:41,8,0	0/1:23,0:19:17.30:17,0,144	0/0:25,3:27:3.71:0,4,390	0/1:22,3:22:73.01:73,0,182	0/0:19,0:16:11.48:0,11,102	0/0:12,0:11:9:0,9,86	0/0:16,0:15:5.99:0,6,50	./.	0/0:13,0:12:6.02:0,6,87	0/1:50,0:49:78.03:78,0,435	0/1:15,1:15:14.28:14,0,166	1/1:17,0:14:5.68:28,6,0	0/0:13,0:11:18:0,18,167	1/1:5,0:4:5.68:28,6,0
chr10	104123588	.	A	AT	369.77	PASS	AB=0.788;AC=7;AF=0.125;AN=56;BaseQRankSum=4.490;DP=566;FS=15.268;HRun=0;HaplotypeScore=98.9868;InbreedingCoeff=0.5941;MQ=45.04;MQ0=60;MQRankSum=-4.032;QD=5.78;ReadPosRankSum=-4.673;VQSLOD=0.9677;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:32:20.96:0,21,246	0/0:8,0:7:15.05:0,15,201	0/0:27,0:2:6.02:0,6,83	0/0:40,0:2:3.01:0,3,41	0/0:5,0:5:0:0,0,0	0/0:21,0:18:29.84:0,30,387	0/0:25,0:24:57.05:0,57,726	0/0:17,0:15:45.15:0,45,603	0/0:19,0:14:15:0,15,159	0/0:15,0:13:39.13:0,39,538	0/0:10,0:8:18.48:0,18,224	0/0:17,0:16:15.82:0,16,264	0/0:16,0:12:14.79:0,15,182	0/0:19,0:16:42.14:0,42,581	1/1:20,0:20:14.97:248,15,0	0/0:24,0:20:39.07:0,39,503	0/0:32,0:30:69.18:0,69,936	0/0:26,0:23:55.86:0,56,714	0/0:18,0:16:45.14:0,45,591	0/0:9,0:8:8.91:0,9,120	0/0:19,0:17:12.04:0,12,165	1/1:11,1:11:6.02:77,6,0	0/0:14,0:13:12.04:0,12,165	0/0:55,0:54:99:0,108,1394	0/0:17,0:16:21.02:0,21,270	0/1:19,7:20:99:160,0,346	0/0:14,0:12:18.91:0,19,186	1/1:5,0:4:2.44:6,2,0
chr10	104123983	.	CGT	C	306.17	PASS	AB=0.943;AC=20;AF=0.417;AN=48;BaseQRankSum=3.906;DP=545;FS=18.645;HRun=0;HaplotypeScore=85.7813;InbreedingCoeff=0.1866;MQ=65.01;MQ0=9;MQRankSum=2.008;QD=1.00;ReadPosRankSum=2.707;VQSLOD=-0.1314;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:34,2:36:19.77:20,0,111	0/0:8,0:8:9:0,9,108	./.	./.	0/1:14,0:13:0:0,0,0	1/1:16,3:17:6.01:63,6,0	1/1:17,5:22:9.02:95,9,0	./.	0/0:22,0:21:12.04:0,12,163	0/0:15,0:15:3.01:0,3,41	0/0:14,0:13:6.01:0,6,68	0/0:13,0:12:6.02:0,6,87	1/1:20,0:20:3:30,3,0	0/0:24,0:23:3.01:0,3,42	0/0:12,0:16:6:0,6,52	0/0:10,0:9:6:0,6,68	0/1:19,2:21:16.78:17,0,136	0/0:17,0:17:6.91:0,7,88	0/0:16,0:13:0.89:0,1,2	./.	0/1:50,0:49:0.01:0,0,0	1/1:15,0:16:2.84:14,3,0	0/1:12,0:12:0:0,0,0	0/1:40,2:43:56.69:57,0,155	0/1:12,1:13:25.81:26,0,37	1/1:18,2:20:3:31,3,0	1/1:7,3:10:6.01:64,6,0	0/1:7,2:8:25.80:26,0,34
chr10	104124749	.	A	AGAG	357.90	PASS	AB=0.862;AC=14;AF=0.318;AN=44;BaseQRankSum=-2.187;DP=348;FS=0.000;HRun=0;HaplotypeScore=56.0435;InbreedingCoeff=0.3667;MQ=73.89;MQ0=9;MQRankSum=0.078;QD=3.77;ReadPosRankSum=-0.633;VQSLOD=1.3133;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:8.97:0,9,106	./.	./.	./.	0/0:13,0:13:9.01:0,9,94	0/1:9,3:12:14.68:162,0,15	1/1:12,1:13:6.02:106,6,0	1/1:18,0:17:3:28,3,0	./.	./.	0/0:8,0:8:8.85:0,9,94	0/0:9,0:10:9:0,9,101	./.	0/0:5,0:5:3.01:0,3,40	0/0:11,0:12:2.98:0,3,21	0/0:11,0:11:12.03:0,12,147	0/0:15,0:15:8.98:0,9,120	0/0:24,0:24:12:0,12,128	1/1:12,0:11:6.46:49,6,0	1/1:9,0:6:3:25,3,0	1/1:15,0:15:3.01:48,3,0	0/0:15,0:15:2.84:0,3,40	0/0:16,0:16:9.03:0,9,120	0/0:8,0:9:18.50:0,18,222	0/0:14,0:13:3:0,3,27	0/1:10,1:12:12.02:69,0,12	1/1:4,0:4:0.47:1,0,0	0/0:6,0:6:3.01:0,3,40
chr10	104124797	.	CGTGT	C	553.03	PASS	AB=0.959;AC=13;AF=0.260;AN=50;BaseQRankSum=2.861;DP=423;FS=0.963;HRun=0;HaplotypeScore=70.9875;InbreedingCoeff=0.4996;MQ=52.93;MQ0=7;MQRankSum=-0.680;QD=5.22;ReadPosRankSum=1.959;VQSLOD=1.7180;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:27.30:0,27,547	./.	./.	./.	1/1:10,4:14:5.91:93,6,0	0/1:16,0:16:22.91:23,0,340	0/0:21,0:23:35.59:0,36,731	0/0:15,0:13:3.01:0,3,38	0/1:16,1:17:19.86:20,0,357	0/0:9,0:13:17.52:0,18,195	0/0:11,0:11:9.03:0,9,183	0/0:13,0:14:23.82:0,24,460	0/0:10,0:10:15.26:0,15,267	0/0:8,0:7:6.49:0,6,136	1/1:6,6:13:15.04:213,15,0	0/0:12,0:15:26.56:0,27,501	0/1:13,1:14:17.33:17,0,483	0/0:10,0:10:15.52:0,16,332	0/0:12,0:11:3.01:0,3,38	0/0:7,0:7:9.03:0,9,142	0/0:26,0:34:24.01:0,24,309	1/1:4,2:9:9.03:136,9,0	0/0:10,0:12:16.82:0,17,296	0/0:22,0:24:21.66:0,22,524	0/0:8,0:9:8.76:0,9,121	1/1:11,0:11:5.90:68,6,0	0/0:9,0:9:15.01:0,15,207	1/1:9,3:11:8.97:140,9,0
chr10	104127516	.	ATG	A	720.86	PASS	AB=0.851;AC=20;AF=0.435;AN=46;BaseQRankSum=2.710;DP=241;FS=1.594;HRun=0;HaplotypeScore=46.6806;InbreedingCoeff=-0.0598;MQ=48.68;MQ0=14;MQRankSum=-0.118;QD=4.94;ReadPosRankSum=-1.172;VQSLOD=2.2578;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,3:17:86.25:86,0,266	0/0:2,0:2:6.02:0,6,89	0/0:17,0:5:2.92:0,3,17	./.	0/1:7,1:7:18.22:18,0,166	0/1:7,3:10:54.50:54,0,78	0/1:7,3:9:23.99:41,0,24	./.	0/0:8,0:8:8.97:0,9,134	1/1:1,4:5:12.01:121,12,0	./.	0/0:7,0:7:18.05:0,18,252	0/1:4,0:4:15.07:15,0,39	0/1:6,1:7:24.25:24,0,81	1/1:0,3:4:11.87:114,12,0	0/0:1,0:1:3:0,3,27	0/1:19,2:21:16.94:17,0,412	0/1:22,5:26:99:122,0,573	1/1:4,0:4:2.84:14,3,0	1/1:0,0:3:2.84:14,3,0	./.	0/0:4,0:4:6.02:0,6,90	0/0:5,0:5:9.03:0,9,127	0/0:18,0:18:36.07:0,36,511	0/1:6,2:8:15.21:15,0,208	0/1:6,2:8:33.42:68,0,33	./.	1/1:3,4:8:14.87:147,15,0
chr10	104130143	.	GT	G	3525.58	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.755;DP=673;FS=28.230;HRun=1;HaplotypeScore=63.3869;InbreedingCoeff=0.9933;MQ=83.89;MQ0=0;MQRankSum=-2.310;QD=38.32;ReadPosRankSum=2.064;VQSLOD=1.6775;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,2300	0/0:6,0:6:18.06:0,18,288	0/0:27,0:27:80.74:0,81,1184	0/0:23,0:23:66.18:0,66,976	1/1:1,14:15:42.11:553,42,0	0/0:29,0:28:87.28:0,87,1367	0/0:29,0:29:87.28:0,87,1358	0/0:30,0:30:90.29:0,90,1398	0/0:33,0:33:99:0,99,1583	0/0:26,0:26:78.26:0,78,1234	0/0:7,0:7:21.07:0,21,336	0/0:24,0:24:72.23:0,72,1125	0/0:37,0:37:99:0,111,1770	0/0:29,0:29:87.30:0,87,1391	1/1:0,23:23:63.21:881,63,0	0/0:44,0:44:99:0,132,2084	0/0:28,0:28:84.29:0,84,1343	0/0:25,0:25:75.24:0,75,1173	0/0:21,0:21:63.21:0,63,1007	0/0:9,0:9:27.08:0,27,409	0/0:24,0:24:72.25:0,72,1144	1/1:0,17:17:45.15:629,45,0	0/0:15,0:15:45.15:0,45,715	0/0:36,0:36:99:0,108,1653	0/0:12,0:12:36.12:0,36,572	1/1:1,20:21:15.22:791,15,0	0/0:19,0:19:57.19:0,57,911	1/1:0,16:16:48.16:671,48,0
chr10	104132101	.	A	AACAC	2662.45	PASS	AB=0.834;AC=20;AF=0.370;AN=54;BaseQRankSum=-2.463;DP=623;FS=2.833;HRun=0;HaplotypeScore=115.2036;InbreedingCoeff=0.5700;MQ=62.38;MQ0=14;MQRankSum=-1.677;QD=9.82;ReadPosRankSum=-2.522;VQSLOD=2.7644;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:32:5.23:5,0,439	0/0:10,0:10:12:0,12,161	./.	0/0:36,0:24:3.01:0,3,40	1/1:11,9:22:18.06:425,18,0	0/0:21,0:21:24.07:0,24,356	0/0:22,0:26:26.98:0,27,363	1/1:25,0:25:29.96:420,30,0	0/0:19,0:19:11.94:0,12,188	0/0:15,0:16:9.01:0,9,122	0/0:12,0:13:14.03:0,14,155	0/1:20,0:24:16.26:16,0,256	0/0:16,0:16:5.93:0,6,94	0/0:15,0:15:12.04:0,12,188	1/1:10,8:20:11.70:282,12,0	0/0:23,0:25:21.06:0,21,291	0/0:23,0:23:27.07:0,27,398	0/0:20,0:25:32.82:0,33,425	1/1:12,5:17:15.01:226,15,0	1/1:12,5:17:9.03:213,9,0	0/1:18,14:35:25.05:277,0,25	1/1:15,9:24:9.31:279,9,0	0/0:16,0:16:18.06:0,18,280	0/0:37,0:39:32.12:0,32,688	0/0:16,0:17:30.08:0,30,431	0/1:15,1:26:11.13:432,0,11	1/1:12,3:19:9.03:205,9,0	1/1:5,1:6:1.85:69,2,0
chr10	104132893	.	A	AG	2923.27	PASS	AB=0.745;AC=20;AF=0.357;AN=56;BaseQRankSum=-5.153;DP=573;FS=4.536;HRun=10;HaplotypeScore=89.7703;InbreedingCoeff=0.5315;MQ=74.82;MQ0=0;MQRankSum=0.095;QD=11.46;ReadPosRankSum=-0.744;VQSLOD=3.1796;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:30:32.28:0,32,440	0/1:5,3:8:48.84:49,0,56	0/0:16,0:16:11.72:0,12,118	0/1:11,0:11:12.80:13,0,63	0/1:11,11:22:93.06:117,0,93	0/0:24,1:25:15.71:0,16,323	0/0:24,0:24:68.88:0,69,560	0/0:8,0:23:32.36:0,32,94	1/1:4,17:21:42.11:448,42,0	0/0:17,0:17:20.95:0,21,172	0/0:9,0:9:17.96:0,18,148	0/1:13,20:33:10.16:313,0,10	1/1:7,16:23:30.07:318,30,0	1/1:8,13:21:30.08:320,30,0	1/1:10,21:31:42.11:447,42,0	0/0:25,0:25:59.90:0,60,490	0/0:39,1:42:99:0,100,799	0/0:27,0:27:57.24:0,57,455	0/0:3,0:13:21.80:0,22,78	0/0:6,0:13:22.44:0,22,81	0/0:5,0:19:28.51:0,29,82	1/1:7,8:16:8.35:218,8,0	1/1:10,8:18:15.04:158,15,0	1/1:5,23:28:40.07:587,40,0	0/0:16,0:16:32.91:0,33,265	0/1:11,4:15:9.61:111,0,10	0/0:6,0:18:24.44:0,24,70	0/1:4,4:8:18.63:26,0,19
chr10	104135192	.	GCACA	G	1556.48	PASS	AB=0.819;AC=19;AF=0.352;AN=54;BaseQRankSum=7.313;DP=806;FS=22.748;HRun=0;HaplotypeScore=148.7008;InbreedingCoeff=0.5201;MQ=57.60;MQ0=25;MQRankSum=-1.104;QD=5.17;ReadPosRankSum=-0.337;VQSLOD=1.2371;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:50.87:0,51,1441	0/0:8,0:8:12.01:0,12,236	./.	0/0:35,0:3:0:0,0,0	1/1:6,8:16:19:266,19,0	0/1:21,1:25:8.69:9,0,580	0/0:42,0:48:65.12:0,65,1235	0/1:28,0:28:1.22:1,0,32	0/0:39,0:45:94.65:0,95,1652	0/0:24,0:24:26.10:0,26,468	0/1:20,1:22:51.09:51,0,277	0/0:27,3:31:6.38:0,6,927	0/0:32,0:39:60.32:0,60,1128	0/0:30,1:39:20.74:0,21,1089	1/1:18,19:39:48.35:707,48,0	0/0:19,0:24:41.31:0,41,720	0/0:21,0:26:41.06:0,41,709	0/0:35,0:39:69.26:0,69,1306	1/1:12,0:13:3:28,3,0	0/1:6,0:15:0.26:0,0,0	0/1:44,0:60:0:1,0,0	1/1:9,10:20:8.66:122,9,0	0/0:16,0:16:23.43:0,23,297	0/0:39,0:41:68.59:0,69,1264	0/1:18,1:20:20.16:20,0,502	1/1:9,8:19:20.31:363,20,0	1/1:10,0:17:11.50:93,12,0	0/1:1,3:5:3.48:66,0,3
chr10	104136470	.	ATG	A	1492.24	PASS	AB=0.793;AC=18;AF=0.333;AN=54;BaseQRankSum=13.941;DP=432;FS=98.068;HRun=0;HaplotypeScore=193.0296;InbreedingCoeff=-0.4654;MQ=63.13;MQ0=2;MQRankSum=-10.030;QD=4.92;ReadPosRankSum=4.003;VQSLOD=-0.3887;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:26:43.58:0,44,1380	0/1:5,4:11:99:117,0,160	0/1:10,0:11:15.36:15,0,72	0/0:14,0:12:11.01:0,11,163	0/1:15,4:20:66.16:66,0,613	0/0:9,0:9:26.95:0,27,396	0/1:17,4:21:67.07:67,0,836	0/0:11,0:11:30.09:0,30,541	0/1:15,2:17:24.09:24,0,630	0/1:14,3:19:71.88:72,0,609	0/1:5,6:12:99:181,0,149	0/1:17,5:22:90.44:90,0,826	0/1:15,5:20:99:117,0,585	0/0:15,1:16:13.63:0,14,730	0/1:13,5:19:99:107,0,636	0/0:13,1:14:4.49:0,4,648	0/0:10,0:10:27.09:0,27,524	0/1:10,2:12:39.16:39,0,409	0/1:9,1:10:7.75:8,0,445	0/1:11,2:13:35.66:36,0,414	0/0:12,0:12:22.38:0,22,547	0/1:20,4:24:74.83:75,0,724	0/1:3,7:10:1.12:194,0,1	0/0:12,2:14:5.86:0,6,377	0/1:15,9:26:99:202,0,669	0/1:12,5:17:99:145,0,554	0/1:15,4:19:89.98:90,0,605	./.
chr10	104136492	.	AGG	A	53.55	PASS	AB=0.863;AC=9;AF=0.167;AN=54;BaseQRankSum=1.292;DP=344;FS=4.838;HRun=5;HaplotypeScore=193.6084;InbreedingCoeff=-0.1723;MQ=53.54;MQ0=1;MQRankSum=-3.865;QD=0.49;ReadPosRankSum=-0.622;VQSLOD=-0.6707;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:41.75:0,42,641	0/0:11,0:11:15.84:0,16,200	0/0:8,0:8:12.04:0,12,182	0/1:9,0:7:18.73:19,0,105	0/1:18,0:18:2.46:2,0,401	0/1:4,1:5:9.90:10,0,96	0/0:12,0:13:36.51:0,37,521	0/1:9,1:11:3.69:4,0,153	0/0:15,2:19:7.58:0,8,527	0/1:13,1:15:3.12:3,0,356	0/0:10,0:11:13.83:0,14,180	0/0:17,0:17:48.01:0,48,743	0/1:16,4:20:60.41:60,0,323	0/1:10,2:13:2.88:3,0,244	0/0:13,0:14:28.57:0,29,455	0/1:11,1:13:2.16:2,0,526	0/0:9,1:10:27.07:0,27,459	0/0:5,0:5:15.05:0,15,270	0/1:2,2:5:63.61:64,0,83	0/0:11,0:11:20.48:0,20,362	0/0:5,1:6:5.33:0,5,134	0/0:23,0:24:46.05:0,46,716	0/0:7,0:7:16.37:0,16,134	0/0:11,0:11:6.45:0,6,172	0/0:21,0:21:40.88:0,41,545	0/0:15,0:16:42.40:0,42,662	0/0:10,0:11:29.21:0,29,385	./.
chr10	104136502	.	C	CAG	3912.67	PASS	AB=0.750;AC=35;AF=0.648;AN=54;BaseQRankSum=-8.308;DP=272;FS=7.534;HRun=0;HaplotypeScore=164.3792;InbreedingCoeff=-0.3342;MQ=48.34;MQ0=1;MQRankSum=-0.066;QD=15.05;ReadPosRankSum=1.517;VQSLOD=3.4140;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,11:14:8.01:346,8,0	0/1:7,2:9:52.20:52,0,70	0/0:6,0:5:10.53:0,11,83	0/0:6,0:4:0.47:0,0,1	1/1:6,9:15:16.83:226,17,0	1/1:2,1:3:2.72:33,3,0	0/1:4,7:11:20.49:212,0,20	1/1:5,2:7:9.14:129,9,0	0/1:11,5:16:27.06:210,0,27	0/1:8,1:9:37.98:107,0,38	0/1:6,2:8:23.74:56,0,24	0/1:6,6:13:83.25:248,0,83	0/1:13,4:17:60.26:150,0,60	1/1:7,4:11:13.95:163,14,0	0/1:4,6:10:13.69:197,0,14	0/1:7,5:12:4.35:193,0,4	1/1:1,7:8:21.06:251,21,0	0/1:2,3:5:17.94:87,0,18	0/1:4,1:5:27.54:28,0,28	1/1:6,4:10:18.05:214,18,0	1/1:3,1:4:2.73:41,3,0	0/1:11,10:21:16.26:280,0,16	0/1:5,0:6:24.14:24,0,53	1/1:4,4:8:3.14:63,3,0	0/1:11,6:17:95.26:167,0,95	1/1:8,6:14:13.19:350,13,0	0/1:4,3:7:45.95:87,0,46	./.
chr10	104136505	.	GCCA	G	6168.57	PASS	AB=1.000;AC=51;AF=0.944;AN=54;BaseQRankSum=0.206;DP=202;FS=0.000;HRun=0;HaplotypeScore=110.1835;InbreedingCoeff=0.5746;MQ=49.88;MQ0=1;MQRankSum=-1.682;QD=31.31;ReadPosRankSum=2.706;VQSLOD=5.1729;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:34.34:388,34,0	1/1:0,6:6:15.05:224,15,0	0/0:3,0:4:7.66:0,8,29	0/1:4,0:3:0:0,0,0	1/1:0,10:10:20.75:199,21,0	1/1:0,2:2:6:58,6,0	1/1:0,10:10:30.09:388,30,0	1/1:0,4:4:12.04:175,12,0	1/1:1,11:12:29.67:336,30,0	1/1:1,4:5:14.54:178,15,0	1/1:0,6:6:12.51:168,13,0	1/1:0,11:11:30.09:384,30,0	1/1:0,15:15:35.77:464,36,0	1/1:0,7:7:15.02:147,15,0	1/1:0,9:9:26.99:321,27,0	1/1:1,8:9:25.58:296,26,0	1/1:0,8:8:21.03:228,21,0	1/1:1,4:5:12.04:165,12,0	1/1:0,3:3:9.03:139,9,0	1/1:1,4:5:14.40:140,14,0	1/1:0,2:2:5.85:59,6,0	1/1:1,12:13:29.45:325,29,0	1/1:1,3:4:9.03:154,9,0	1/1:0,8:8:10.84:123,11,0	1/1:0,13:13:39.11:531,39,0	1/1:0,8:8:24.08:320,24,0	1/1:0,6:6:18.06:259,18,0	./.
chr10	104137109	.	AACACACAC	A	737.37	PASS	AB=0.923;AC=9;AF=0.161;AN=56;BaseQRankSum=2.514;DP=430;FS=13.259;HRun=0;HaplotypeScore=113.0308;InbreedingCoeff=0.7369;MQ=67.89;MQ0=6;MQRankSum=-4.450;QD=16.39;ReadPosRankSum=-1.452;VQSLOD=1.8856;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:54.19:0,54,2121	0/0:7,0:7:18.06:0,18,742	0/0:30,0:17:24:0,24,679	0/0:32,0:22:29.07:0,29,909	0/0:4,0:10:3.01:0,3,89	0/0:18,0:18:36.12:0,36,1498	0/0:27,0:30:60.19:0,60,2030	0/1:11,1:12:2.78:151,0,3	0/0:21,0:20:36.11:0,36,1338	0/0:14,0:15:36.12:0,36,1290	0/0:9,0:9:18.04:0,18,591	0/0:9,0:11:30.10:0,30,1100	0/0:7,0:10:24.08:0,24,822	0/0:10,0:12:18.06:0,18,693	0/0:6,0:9:6.02:0,6,210	0/0:19,0:19:33.11:0,33,1364	0/0:14,0:14:33.11:0,33,1360	0/0:18,0:18:45.15:0,45,1835	1/1:3,1:5:11.86:172,12,0	1/1:2,1:3:5.89:92,6,0	1/1:7,9:15:3.01:78,3,0	0/0:9,0:9:9.01:0,9,167	0/0:7,0:9:15.02:0,15,426	0/0:37,0:40:99:0,111,4147	0/0:12,0:14:39.12:0,39,1347	0/0:11,0:10:24.08:0,24,754	1/1:1,8:9:15.52:388,16,0	0/0:7,0:7:12.04:0,12,366
chr10	104137419	.	GGA	G	1518.67	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.993;DP=517;FS=5.714;HRun=0;HaplotypeScore=87.4855;InbreedingCoeff=0.9441;MQ=82.52;MQ0=0;MQRankSum=-10.200;QD=26.64;ReadPosRankSum=-0.715;VQSLOD=4.5406;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,2072	0/0:3,0:3:9.03:0,9,161	0/0:22,0:22:65.21:0,65,1124	0/0:17,0:17:41.93:0,42,763	0/0:18,0:18:54.14:0,54,1055	0/0:20,0:20:60.21:0,60,1219	0/0:23,0:23:69.24:0,69,1402	1/1:2,7:9:27.06:362,27,0	0/0:25,0:25:75.26:0,75,1505	0/0:19,0:19:54.19:0,54,1096	0/0:5,0:5:15.05:0,15,305	0/0:21,0:21:63.22:0,63,1277	0/0:27,0:27:81.28:0,81,1629	0/0:25,0:25:75.26:0,75,1523	0/0:20,0:20:60.21:0,60,1219	0/0:25,0:25:75.26:0,75,1523	0/0:45,0:45:99:0,132,2607	0/0:24,0:24:66.21:0,66,1281	1/1:4,7:11:24.50:332,24,0	1/1:0,2:2:6.02:80,6,0	1/1:0,21:21:41.59:408,42,0	0/0:12,0:12:36.12:0,36,730	0/0:9,0:9:27.09:0,27,549	0/0:29,0:29:87.28:0,87,1712	0/0:13,0:13:39.13:0,39,766	0/0:19,0:19:57.20:0,57,1157	1/1:0,14:14:39.23:506,39,0	0/0:4,0:4:9.03:0,9,183
chr10	104137424	.	GACCTC	G	2415.80	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.187;DP=525;FS=4.597;HRun=0;HaplotypeScore=116.8842;InbreedingCoeff=0.9434;MQ=83.63;MQ0=0;MQRankSum=-9.074;QD=43.92;ReadPosRankSum=-0.896;VQSLOD=3.3741;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,3415	0/0:4,0:4:9.03:0,9,300	0/0:22,0:22:27.46:0,27,1556	0/0:20,0:20:49.54:0,50,1390	0/0:18,0:18:54.19:0,54,1741	0/0:20,0:20:60.21:0,60,1991	0/0:24,0:24:72.25:0,72,2349	1/1:0,7:7:21.07:459,21,0	0/0:26,0:26:78.27:0,78,2504	0/0:18,0:18:51.18:0,51,1675	0/0:5,0:5:15.05:0,15,499	0/0:21,0:21:63.22:0,63,2096	0/0:30,0:30:90.29:0,90,2858	0/0:25,0:25:72.25:0,72,2395	0/0:21,0:21:63.22:0,63,2097	0/0:27,0:27:81.28:0,81,2694	0/0:45,0:45:99:0,132,4313	0/0:19,0:19:57.20:0,57,1782	1/1:3,7:10:27.05:505,27,0	1/1:0,2:2:6.02:122,6,0	1/1:1,21:22:44.14:706,44,0	0/0:13,0:13:39.13:0,39,1260	0/0:9,0:9:27.09:0,27,891	0/0:30,0:30:90.31:0,90,2920	0/0:13,0:13:39.13:0,39,1220	0/0:20,0:20:60.21:0,60,1998	1/1:0,14:14:42.10:793,42,0	0/0:4,0:4:9.03:0,9,300
chr10	104138309	.	GAGAC	G	576.25	PASS	AB=0.849;AC=5;AF=0.089;AN=56;BaseQRankSum=8.506;DP=797;FS=0.000;HRun=0;HaplotypeScore=162.1587;InbreedingCoeff=0.1853;MQ=63.74;MQ0=3;MQRankSum=-0.984;QD=6.55;ReadPosRankSum=-2.349;VQSLOD=2.4471;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,114,2682	0/0:10,0:10:30.10:0,30,693	0/0:43,0:29:58:0,58,1047	0/0:46,0:32:45.73:0,46,1002	0/0:7,0:7:2.90:0,3,7	0/0:17,0:17:48.13:0,48,1025	0/0:64,0:64:99:0,168,3879	0/0:42,0:42:99:0,102,2257	0/0:26,0:26:72.23:0,72,1710	0/0:23,0:23:60.21:0,60,1463	0/0:8,0:8:24.08:0,24,579	0/0:29,0:29:75.26:0,75,1868	0/0:26,0:26:66.19:0,66,1539	0/0:25,0:25:60.17:0,60,1355	0/1:17,3:19:43.73:110,0,44	0/0:25,0:25:57.20:0,57,1422	0/0:36,0:35:96.32:0,96,2326	0/0:26,0:26:69.20:0,69,1566	0/0:16,0:15:33.11:0,33,779	0/0:9,0:9:27.09:0,27,649	0/0:90,0:90:99:0,208,4934	1/1:18,3:21:0.71:60,1,0	0/0:15,0:15:36.12:0,36,891	0/0:47,0:47:99:0,123,2875	0/0:12,0:12:33.10:0,33,746	0/1:21,5:26:30.91:290,0,31	0/0:18,0:18:42.12:0,42,941	0/1:17,4:21:24.84:226,0,25
chr10	104138415	.	GAC	G	930.46	PASS	AB=0.656;AC=9;AF=0.180;AN=50;BaseQRankSum=5.790;DP=824;FS=5.296;HRun=0;HaplotypeScore=128.5943;InbreedingCoeff=0.6872;MQ=46.83;MQ0=63;MQRankSum=-5.817;QD=4.43;ReadPosRankSum=-2.726;VQSLOD=1.7488;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:45:87.20:0,87,1293	0/0:8,0:8:24.06:0,24,359	./.	./.	0/0:11,0:11:5.84:0,6,39	0/0:35,0:33:59.98:0,60,930	0/0:66,2:61:99:0,102,1619	1/1:29,20:34:46.90:529,47,0	0/0:31,0:30:50.98:0,51,765	0/0:38,1:32:32.81:0,33,1102	0/0:13,0:10:11.98:0,12,159	0/0:32,2:33:57.28:0,57,813	0/0:25,0:25:53.99:0,54,787	0/0:32,1:30:50.52:0,51,763	0/0:20,0:17:2.97:0,3,20	0/0:31,1:30:10.90:0,11,686	0/0:44,0:42:73.10:0,73,1441	0/0:37,0:36:60.69:0,61,820	1/1:15,4:13:15.49:158,15,0	1/1:6,14:17:9.03:111,9,0	0/1:50,55:91:28.58:70,0,29	./.	0/0:17,0:14:18.06:0,18,285	0/0:44,1:42:41.11:0,41,1125	0/0:19,0:17:21.06:0,21,314	0/0:29,0:22:1.27:0,1,192	1/1:8,9:17:17.90:213,18,0	0/0:14,0:11:4.19:0,4,18
chr10	104138479	.	G	GAC	1077.91	PASS	AB=0.881;AC=17;AF=0.304;AN=56;BaseQRankSum=2.148;DP=719;FS=1.319;HRun=0;HaplotypeScore=116.2499;InbreedingCoeff=0.3932;MQ=49.46;MQ0=49;MQRankSum=-1.504;QD=4.40;ReadPosRankSum=-1.433;VQSLOD=2.8408;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:46:49.02:0,49,609	0/0:14,0:14:2.86:0,3,228	0/0:26,0:10:0.20:0,0,92	0/0:18,0:7:8.87:0,9,63	1/1:12,0:12:5.79:37,6,0	0/0:37,0:37:58.75:0,59,661	0/0:39,0:32:56.02:0,56,579	1/1:31,0:21:22.28:243,22,0	0/1:24,1:24:17.40:17,0,260	0/0:31,0:27:47.84:0,48,504	0/0:15,0:14:23.57:0,24,233	0/0:28,0:28:45.13:0,45,527	0/0:23,0:24:38.43:0,38,407	0/0:25,0:25:42.68:0,43,469	1/1:19,0:16:6.63:31,7,0	0/0:27,0:26:38.28:0,38,397	0/0:39,0:38:63.72:0,64,722	0/0:29,0:29:43.12:0,43,469	0/1:19,5:16:17.63:151,0,18	0/1:11,0:11:21.71:83,0,22	1/1:54,5:49:3.99:458,4,0	1/1:14,0:13:6.39:60,6,0	0/0:19,0:17:27.08:0,27,316	0/0:33,0:33:53.99:0,54,601	0/0:19,0:16:33.10:0,33,382	0/1:22,0:17:17.35:78,0,17	0/1:8,12:20:58.79:81,0,59	1/1:7,0:6:2.49:6,2,0
chr10	104139456	.	CCA	C	1114.93	PASS	AB=0.835;AC=14;AF=0.259;AN=54;BaseQRankSum=4.873;DP=709;FS=6.346;HRun=0;HaplotypeScore=103.8758;InbreedingCoeff=0.1238;MQ=66.79;MQ0=13;MQRankSum=1.892;QD=4.41;ReadPosRankSum=0.395;VQSLOD=1.7548;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,3:52:47.44:0,47,1060	0/0:10,0:10:18.06:0,18,266	0/0:35,0:18:3.01:0,3,42	./.	0/0:14,0:24:19.73:0,20,126	0/1:13,4:17:96.61:97,0,313	0/0:29,4:34:5.29:0,5,459	1/1:20,0:21:11.32:94,11,0	0/1:29,10:39:47.18:47,0,581	0/1:20,2:21:43.03:43,0,247	0/1:13,2:16:6.80:7,0,270	0/1:16,1:17:5.89:6,0,312	0/1:13,1:14:9.70:10,0,295	0/0:23,2:25:8.32:0,8,494	0/0:18,0:25:18:0,18,157	0/0:25,4:29:19.41:0,19,686	0/0:19,0:19:41.93:0,42,636	0/0:23,0:24:54.18:0,54,821	1/1:12,0:15:5.64:27,6,0	0/1:11,10:21:18.75:229,0,19	1/1:23,24:48:5.02:455,5,0	0/0:20,0:23:3.01:0,3,41	0/0:13,0:13:23.91:0,24,290	0/0:41,1:42:38.41:0,38,949	0/0:17,0:18:24:0,24,303	0/0:32,0:31:58.51:0,59,457	0/1:13,7:20:16.30:254,0,16	0/0:5,0:8:11.15:0,11,68
chr10	104141963	.	A	ATGTG	1123.40	PASS	AB=0.903;AC=21;AF=0.404;AN=52;BaseQRankSum=2.391;DP=581;FS=18.670;HRun=0;HaplotypeScore=120.1011;InbreedingCoeff=0.5139;MQ=64.34;MQ0=8;MQRankSum=-2.803;QD=4.07;ReadPosRankSum=-2.883;VQSLOD=0.6207;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:29.79:0,30,365	0/0:4,0:6:6.01:0,6,74	./.	./.	0/1:9,0:12:0:0,0,0	0/0:18,0:19:13.43:0,13,144	0/0:20,0:20:18.11:0,18,215	1/1:18,0:18:3.37:18,3,0	0/0:14,0:18:5.19:0,5,196	0/0:17,0:17:7.25:0,7,100	0/0:4,0:5:6.01:0,6,72	0/0:30,0:30:14.93:0,15,166	0/0:17,0:20:22.90:0,23,276	0/1:16,0:23:7.08:7,0,39	0/1:19,0:18:21.46:21,0,38	0/0:16,0:25:8.05:0,8,162	0/0:32,0:33:54.04:0,54,672	0/0:20,0:27:19.30:0,19,276	1/1:22,0:24:26.84:322,27,0	1/1:8,0:7:2.93:45,3,0	0/1:24,0:23:0:0,0,0	0/1:16,0:18:12.60:31,0,13	1/1:10,4:14:3.01:70,3,0	1/1:21,16:42:17.26:247,17,0	1/1:12,7:24:8.99:209,9,0	1/1:24,0:24:11.98:187,12,0	1/1:26,0:26:10.17:134,10,0	0/0:5,0:6:3:0,3,26
chr10	104142017	.	G	GCGCAC	2740	PASS	AB=0.657;AC=8;AF=0.143;AN=56;BaseQRankSum=-1.753;DP=560;FS=5.135;HRun=0;HaplotypeScore=114.2050;InbreedingCoeff=0.6014;MQ=71.90;MQ0=5;MQRankSum=-7.643;QD=34.25;ReadPosRankSum=-4.194;VQSLOD=2.4308;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,2158	0/0:5,0:5:12.04:0,12,255	0/0:21,0:18:45.14:0,45,877	0/0:25,0:17:36.12:0,36,689	0/0:17,0:17:39.13:0,39,831	0/0:22,0:22:51.12:0,51,982	0/0:19,0:19:45.13:0,45,858	1/1:3,14:17:48.16:1403,48,0	0/0:24,0:23:51.17:0,51,1049	0/0:19,0:19:44.73:0,45,833	0/0:7,0:7:21.04:0,21,404	0/0:26,0:26:63.12:0,63,1246	0/0:19,0:19:48.16:0,48,1009	0/0:15,0:15:20.98:0,21,321	0/0:15,0:14:35.76:0,36,628	0/0:24,0:24:39.07:0,39,792	0/0:39,0:39:99:0,105,2087	0/0:27,0:27:65.99:0,66,1255	0/1:10,10:22:35.49:1294,0,35	1/1:3,7:10:2.82:20,3,0	1/1:8,10:17:5.77:40,6,0	0/0:23,0:23:57.19:0,57,1156	0/0:13,0:13:27.09:0,27,549	0/0:33,0:33:53.21:0,53,1034	0/0:27,0:27:45.07:0,45,868	0/0:17,0:17:42.62:0,43,874	0/1:6,6:12:10.16:121,0,10	0/0:3,0:3:9.03:0,9,191
chr10	104142863	.	CG	C	1400.01	PASS	AB=0.620;AC=8;AF=0.143;AN=56;BaseQRankSum=4.657;DP=487;FS=0.000;HRun=2;HaplotypeScore=59.6303;InbreedingCoeff=0.6568;MQ=46.61;MQ0=36;MQRankSum=-1.863;QD=18.67;ReadPosRankSum=-0.047;VQSLOD=3.3672;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:66.17:0,66,890	0/0:7,0:6:17.99:0,18,226	0/0:8,0:2:3.01:0,3,32	0/0:11,0:4:7.76:0,8,32	0/0:21,0:19:35.83:0,36,378	0/0:20,0:18:50.97:0,51,619	0/0:26,0:23:62.88:0,63,826	1/1:2,14:15:35.92:367,36,0	0/0:14,0:12:30.04:0,30,399	0/0:27,0:23:60.07:0,60,764	0/0:16,0:16:36.05:0,36,487	0/0:12,0:10:20.99:0,21,253	0/0:9,0:9:24.05:0,24,299	0/0:19,0:17:38.81:0,39,459	0/0:11,0:10:26.99:0,27,317	0/0:11,0:10:24.07:0,24,330	0/0:37,1:30:53.18:0,53,938	0/0:28,0:26:45.11:0,45,627	0/1:7,9:13:13.84:322,0,14	1/1:0,14:14:29.96:326,30,0	0/1:4,8:10:29.51:139,0,30	0/0:16,0:15:32.97:0,33,425	0/0:13,0:13:27.06:0,27,350	0/0:26,0:25:55.31:0,55,734	0/0:22,0:21:50.97:0,51,646	0/0:19,0:18:51.11:0,51,680	1/1:1,16:17:33.06:400,33,0	0/0:11,0:7:17.92:0,18,175
chr10	104144774	.	TCAA	T	1820.25	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.128;DP=643;FS=0.000;HRun=0;HaplotypeScore=109.9266;InbreedingCoeff=0.9990;MQ=76.67;MQ0=0;MQRankSum=-11.884;QD=22.20;ReadPosRankSum=-2.840;VQSLOD=2.9202;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,163,3783	0/0:9,0:9:27.09:0,27,638	0/0:14,0:14:39.13:0,39,919	0/0:16,0:16:39.13:0,39,845	0/0:25,0:25:75.20:0,75,1669	0/0:11,0:11:30.10:0,30,691	0/0:32,0:32:93.32:0,93,2189	1/1:8,13:21:41.76:425,42,0	0/0:21,0:21:63.22:0,63,1448	0/0:33,0:33:96.26:0,96,2209	0/0:20,0:20:57.18:0,57,1276	0/0:33,0:33:99:0,99,2228	0/0:14,0:14:42.14:0,42,951	0/0:25,0:25:75.26:0,75,1751	0/0:26,0:26:75.16:0,75,1566	0/0:25,0:25:75.26:0,75,1773	0/0:53,0:53:99:0,160,3610	0/0:34,0:34:99:0,102,2398	1/1:5,11:16:38.93:404,39,0	1/1:4,14:18:48.03:476,48,0	1/1:4,9:13:24.04:241,24,0	0/0:15,0:15:42.12:0,42,944	0/0:16,0:16:45.13:0,45,975	0/0:34,0:34:99:0,99,2274	0/0:21,0:21:63.22:0,63,1490	0/0:19,0:19:57.20:0,57,1279	1/1:0,14:14:42.07:450,42,0	0/0:10,0:10:30.10:0,30,708
chr10	104144779	.	G	GT	1428.98	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.308;DP=643;FS=1.561;HRun=0;HaplotypeScore=85.2533;InbreedingCoeff=0.9995;MQ=78.21;MQ0=0;MQRankSum=-12.012;QD=20.41;ReadPosRankSum=-2.929;VQSLOD=4.6450;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,169,2346	0/0:10,0:10:27.09:0,27,377	0/0:15,0:15:39.10:0,39,510	0/0:17,0:17:41.67:0,42,514	0/0:24,0:24:72.21:0,72,972	0/0:15,0:15:42.12:0,42,565	0/0:34,0:34:99:0,99,1384	1/1:1,13:14:38.80:312,39,0	0/0:22,0:22:63.19:0,63,863	0/0:32,0:32:96.32:0,96,1329	0/0:19,0:19:54.18:0,54,750	0/0:35,0:35:99:0,102,1391	0/0:13,0:13:39.13:0,39,545	0/0:26,0:26:75.24:0,75,1032	0/0:25,0:25:75.22:0,75,1014	0/0:26,0:26:78.26:0,78,1091	0/0:51,0:51:99:0,154,2137	0/0:36,0:36:99:0,105,1449	1/1:1,13:14:40.90:321,41,0	1/1:1,16:17:47.15:370,47,0	1/1:1,10:11:29.91:260,30,0	0/0:16,0:16:48.15:0,48,653	0/0:13,0:13:39.13:0,39,544	0/0:32,0:32:93.31:0,93,1299	0/0:23,0:23:69.23:0,69,965	0/0:20,0:20:57.17:0,57,766	1/1:0,14:14:41.64:342,42,0	0/0:12,0:12:36.09:0,36,468
chr10	104146874	.	T	TACGC	5630.36	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=2.065;DP=737;FS=4.106;HRun=0;HaplotypeScore=126.8879;InbreedingCoeff=0.9217;MQ=78.58;MQ0=0;MQRankSum=-4.215;QD=43.99;ReadPosRankSum=3.741;VQSLOD=5.1690;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,111,1979	0/0:13,0:13:36.12:0,36,671	0/0:22,0:22:60.18:0,60,988	0/0:18,0:19:24.95:0,25,634	1/1:4,30:35:48.16:1273,48,0	0/0:15,0:15:45.12:0,45,776	0/0:28,0:28:69.17:0,69,1159	0/0:40,0:40:99:0,99,1557	0/0:24,0:24:66.19:0,66,1153	0/0:32,0:32:90.24:0,90,1545	0/0:15,0:15:42.10:0,42,739	0/0:28,0:28:78.23:0,78,1404	0/0:24,0:24:63.19:0,63,1117	0/0:22,0:22:63.20:0,63,1135	1/1:4,23:28:54.19:1438,54,0	0/0:24,0:24:66.21:0,66,1199	0/0:30,0:30:87.20:0,87,1440	0/0:30,0:30:69.24:0,69,1274	0/0:26,0:26:72.23:0,72,1294	0/0:31,0:31:84.21:0,84,1349	0/0:40,0:40:99:0,105,1823	1/1:9,29:40:60.21:1593,60,0	0/0:25,0:25:62.96:0,63,1029	0/0:36,0:36:99:0,105,1857	0/0:16,0:16:42.11:0,42,713	1/1:7,16:24:4.20:1246,4,0	0/0:28,0:27:75.26:0,75,1390	1/1:0,1:1:3.01:80,3,0
chr10	104147254	.	A	AC	4025.66	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=3.383;DP=496;FS=18.039;HRun=2;HaplotypeScore=82.5125;InbreedingCoeff=0.9876;MQ=81.70;MQ0=0;MQRankSum=-2.749;QD=34.41;ReadPosRankSum=-2.027;VQSLOD=1.5084;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,1263	0/0:10,0:10:30.04:0,30,330	0/0:21,0:18:48.57:0,49,561	0/0:30,0:24:56.64:0,57,637	0/0:10,0:10:20.91:0,21,259	0/0:8,0:8:24.03:0,24,280	0/0:38,0:38:99:0,111,1335	1/1:3,23:26:68.99:956,69,0	0/0:15,0:15:42.13:0,42,520	0/0:12,0:12:35.13:0,35,405	0/0:6,0:6:18.05:0,18,212	0/0:16,0:16:45.13:0,45,544	0/0:13,0:13:36.09:0,36,431	0/0:14,0:14:42.12:0,42,506	0/0:19,0:18:30.08:0,30,355	0/0:9,0:9:24.08:0,24,297	0/0:18,0:18:54.15:0,54,656	0/0:16,0:16:48.13:0,48,580	1/1:3,13:16:42.11:580,42,0	1/1:1,15:16:42.14:584,42,0	1/1:4,41:45:99:1390,102,0	0/0:13,0:13:36.11:0,36,446	0/0:13,0:13:36.11:0,36,436	0/0:33,0:33:99:0,99,1198	0/0:10,0:10:30.09:0,30,370	0/0:10,0:10:21.06:0,21,249	1/1:2,12:14:36.12:516,36,0	0/0:8,0:8:12.04:0,12,147
chr10	104147273	.	GGC	G	2096.93	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=11.393;DP=455;FS=0.000;HRun=0;HaplotypeScore=87.3954;InbreedingCoeff=0.7863;MQ=60.83;MQ0=4;MQRankSum=0.264;QD=11.78;ReadPosRankSum=0.679;VQSLOD=2.7769;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:67.41:0,67,701	0/0:8,0:8:15.54:0,16,245	0/0:23,0:14:17.87:0,18,214	0/1:23,0:10:14.78:15,0,82	1/1:9,0:9:6:52,6,0	0/0:10,0:10:11.63:0,12,181	0/0:34,0:34:79.56:0,80,847	1/1:11,4:15:42.01:377,42,0	0/0:13,0:13:14.25:0,14,262	0/0:11,0:11:32.69:0,33,250	0/0:3,0:3:9.02:0,9,136	0/0:15,0:15:27.29:0,27,295	0/0:11,0:11:23.43:0,23,314	0/0:16,0:16:35.46:0,35,483	1/1:18,0:17:15:131,15,0	0/0:8,0:8:18.40:0,18,213	0/0:17,0:17:44.76:0,45,525	0/0:18,0:18:15.36:0,15,439	1/1:7,7:14:38.60:322,39,0	1/1:6,12:18:33.30:269,33,0	1/1:34,6:37:56.78:464,57,0	1/1:13,0:13:6.72:187,7,0	0/0:15,0:15:32.97:0,33,363	0/0:30,0:30:76.25:0,76,1032	0/0:9,0:9:20.97:0,21,259	0/1:7,0:7:18.97:112,0,19	1/1:6,6:12:32.77:275,33,0	1/1:9,0:9:11.98:101,12,0
chr10	104147274	.	GCGCA	G	2510.21	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=10.115;DP=467;FS=3.898;HRun=0;HaplotypeScore=103.3119;InbreedingCoeff=0.7235;MQ=59.50;MQ0=4;MQRankSum=-0.609;QD=14.18;ReadPosRankSum=0.915;VQSLOD=2.8989;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:62.07:0,62,1062	0/0:8,0:8:23.91:0,24,354	0/0:23,0:14:17.87:0,18,214	0/1:22,0:9:14.78:15,0,82	1/1:0,9:9:6.02:118,6,0	0/0:12,0:12:25.86:0,26,317	0/0:35,0:35:95.81:0,96,1282	1/1:15,0:15:42.01:377,42,0	0/0:14,0:14:35.80:0,36,384	0/0:11,0:11:32.72:0,33,273	0/0:3,0:3:9.02:0,9,192	0/0:16,0:16:35.76:0,36,379	0/0:13,0:13:36.36:0,36,558	0/0:17,0:17:44.93:0,45,741	1/1:1,15:18:15.05:258,15,0	0/0:8,0:8:21.41:0,21,334	0/0:17,0:17:27.86:0,28,779	0/0:20,0:20:22.99:0,23,635	1/1:14,0:14:38.61:378,39,0	1/1:18,0:18:33.32:325,33,0	1/1:40,0:37:57.34:465,57,0	0/1:13,0:13:79.72:159,0,80	0/0:15,0:15:33.05:0,33,604	0/0:31,0:31:87.71:0,88,1601	0/0:10,0:10:24.05:0,24,443	0/1:7,0:7:18.98:112,0,19	1/1:12,0:12:32.79:331,33,0	1/1:1,8:9:9.03:178,9,0
chr10	104147276	.	GCA	G	469.65	PASS	AB=0.926;AC=25;AF=0.543;AN=46;BaseQRankSum=5.600;DP=470;FS=2.599;HRun=0;HaplotypeScore=93.7165;InbreedingCoeff=-0.0447;MQ=57.71;MQ0=5;MQRankSum=-2.592;QD=1.37;ReadPosRankSum=0.732;VQSLOD=1.9392;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,1:40:39:39,0,280	0/1:7,1:8:20.71:21,0,122	./.	./.	1/1:10,0:10:5.81:31,6,0	0/1:12,0:12:29.73:30,0,96	0/1:33,1:34:47.98:48,0,332	./.	0/1:12,2:14:53.65:54,0,78	./.	0/0:3,0:3:6.02:0,6,88	0/1:13,3:16:23.82:24,0,76	0/1:12,1:13:11.78:12,0,215	0/1:14,1:15:9.55:10,0,250	1/1:17,0:16:14.36:75,14,0	0/0:8,0:8:12:0,12,137	0/1:21,0:21:10.01:10,0,328	0/1:15,5:20:11.79:12,0,248	1/1:13,0:13:11.36:56,11,0	1/1:18,0:18:11.36:55,11,0	1/1:41,0:38:0.47:1,0,0	0/0:14,0:14:8.02:0,8,72	0/0:14,0:14:18.04:0,18,241	0/1:30,1:31:46.44:46,0,563	0/0:11,0:10:14.81:0,15,166	./.	1/1:12,0:12:11.36:55,11,0	1/1:9,0:9:8.69:47,9,0
chr10	104147305	.	CACACACACACACAG	C	2659.61	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=2.470;DP=534;FS=9.620;HRun=0;HaplotypeScore=176.9274;InbreedingCoeff=0.9591;MQ=59.04;MQ0=28;MQRankSum=-1.508;QD=27.42;ReadPosRankSum=-4.393;VQSLOD=1.0334;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:73.11:0,73,3288	0/0:8,0:8:18.51:0,19,860	0/0:43,0:14:14.10:0,14,258	0/0:57,0:17:43.15:0,43,480	0/0:12,0:11:21.03:0,21,545	0/0:13,0:13:27.07:0,27,1290	0/0:29,0:29:75.13:0,75,3483	1/1:14,0:12:32.90:285,33,0	0/0:15,0:15:36.10:0,36,1588	0/0:8,0:8:24.04:0,24,663	0/0:4,0:4:9.02:0,9,437	0/0:8,0:8:12.50:0,12,583	0/0:14,0:14:42.12:0,42,1957	0/0:12,0:12:33.08:0,33,1823	0/0:20,0:19:35.97:0,36,1213	0/0:13,0:12:31.89:0,32,1510	0/0:24,0:24:65.75:0,66,2946	0/0:20,0:20:48.09:0,48,1972	1/1:7,1:7:14.42:532,14,0	1/1:15,6:20:53.95:837,54,0	1/1:41,2:40:62.92:523,63,0	0/0:9,0:9:12.02:0,12,586	0/0:14,0:13:33.10:0,33,1730	0/0:40,0:40:99:0,117,5559	0/0:13,0:12:33.10:0,33,1672	0/0:13,0:13:39.07:0,39,1184	1/1:7,4:11:33.03:656,33,0	0/0:10,0:10:18.06:0,18,795
chr10	104147317	.	CAG	C	1585.52	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=3.189;DP=520;FS=16.590;HRun=0;HaplotypeScore=88.8185;InbreedingCoeff=0.9370;MQ=74.73;MQ0=25;MQRankSum=-1.641;QD=16.35;ReadPosRankSum=-0.334;VQSLOD=2.4712;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:46.22:0,46,590	0/0:7,0:7:6.64:0,7,185	0/0:49,0:23:21.71:0,22,299	0/0:63,0:27:51.67:0,52,452	0/0:10,0:9:17.95:0,18,135	0/0:12,0:12:20.47:0,20,257	0/0:29,0:29:57.47:0,57,697	1/1:3,11:12:35.89:293,36,0	0/0:16,0:16:25.02:0,25,347	0/0:6,0:6:17.94:0,18,151	0/0:6,0:6:14.98:0,15,152	0/0:9,0:9:6.50:0,7,118	0/0:13,0:13:30.55:0,31,431	0/0:12,0:12:24.58:0,25,435	0/0:20,0:20:37.25:0,37,260	0/0:12,0:12:34.83:0,35,363	0/0:23,0:23:62.07:0,62,727	0/0:18,0:18:33.47:0,33,491	1/1:8,0:7:17.99:180,18,0	1/1:22,0:21:53.79:441,54,0	1/1:39,0:38:59.62:483,60,0	0/0:11,0:11:11.98:0,12,131	0/0:12,0:11:26.97:0,27,341	0/0:37,0:37:85.60:0,86,1119	0/0:12,0:11:33.03:0,33,400	0/0:12,0:12:32.95:0,33,284	1/1:14,0:14:41.97:363,42,0	0/0:8,0:8:19.21:0,19,121
chr10	104147622	.	G	GAGTGAGTCACCC	16424.24	PASS	AB=0.630;AC=19;AF=0.339;AN=56;BaseQRankSum=-1.853;DP=562;FS=4.177;HRun=0;HaplotypeScore=193.1060;InbreedingCoeff=0.8883;MQ=90.84;MQ0=0;MQRankSum=-13.879;QD=107.35;ReadPosRankSum=-2.034;VQSLOD=4.2916;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,144,5205	0/0:9,0:9:27.09:0,27,1004	0/0:25,0:25:39:0,39,1870	0/0:28,0:29:66.20:0,66,2022	1/1:6,3:9:9.01:546,9,0	0/0:19,0:19:54.19:0,54,1804	0/0:32,0:32:87.27:0,87,2705	1/1:24,1:26:65.91:2907,66,0	0/0:20,0:20:57.20:0,57,1984	0/0:19,0:19:51.18:0,51,1815	0/0:11,0:11:24.08:0,24,852	0/0:24,0:24:66.21:0,66,2272	0/0:18,0:18:54.19:0,54,1871	0/0:26,0:26:75.26:0,75,2780	1/1:3,10:17:36.12:2067,36,0	0/0:13,0:13:39.13:0,39,1342	0/0:40,0:40:99:0,114,4078	0/0:20,0:20:60.21:0,60,2046	1/1:8,6:15:42.08:2029,42,0	1/1:3,1:5:6.02:221,6,0	1/1:21,12:35:48.16:2714,48,0	1/1:3,8:11:21.07:1272,21,0	0/0:10,0:10:27.09:0,27,955	0/0:31,0:31:78.22:0,78,2758	0/0:10,0:10:27.08:0,27,885	0/1:7,8:17:63.77:2233,0,64	1/1:4,7:12:33.11:1877,33,0	1/1:4,1:6:12.04:557,12,0
chr10	104148661	.	T	TCG	11872.58	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-15.651;DP=684;FS=0.300;HRun=0;HaplotypeScore=74.1263;InbreedingCoeff=0.9997;MQ=88.81;MQ0=0;MQRankSum=-1.842;QD=48.46;ReadPosRankSum=-0.015;VQSLOD=5.8485;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,154,2246	0/0:14,0:14:36.11:0,36,511	0/0:26,0:26:72.23:0,72,997	0/0:23,0:23:63.18:0,63,895	1/1:1,21:22:47.95:896,48,0	0/0:20,0:20:60.20:0,60,883	0/0:31,0:31:84.28:0,84,1236	1/1:7,29:37:99:1715,99,0	0/0:21,0:21:60.20:0,60,884	0/0:31,0:31:90.30:0,90,1326	0/0:18,0:18:45.15:0,45,663	0/0:27,0:27:78.26:0,78,1147	0/0:23,0:23:69.23:0,69,1016	0/0:26,0:26:75.24:0,75,1085	1/1:3,26:30:81.28:1510,81,0	0/0:15,0:15:45.14:0,45,643	0/0:27,0:26:81.27:0,81,1193	0/0:27,0:27:78.21:0,78,1102	1/1:4,24:29:78.27:1453,78,0	1/1:2,17:19:48.16:897,48,0	1/1:0,33:34:90.31:1684,90,0	1/1:1,25:26:72.25:1345,72,0	0/0:17,0:17:33.11:0,33,484	0/0:23,0:23:66.22:0,66,972	0/0:17,0:17:48.16:0,48,707	1/1:2,24:26:49.24:1249,49,0	1/1:1,11:12:33.11:617,33,0	1/1:0,10:10:27.09:505,27,0
chr10	104148848	.	A	AG	9828.94	PASS	AB=0.545;AC=19;AF=0.339;AN=56;BaseQRankSum=-12.686;DP=685;FS=3.408;HRun=2;HaplotypeScore=66.9818;InbreedingCoeff=0.9320;MQ=84.52;MQ0=0;MQRankSum=-2.858;QD=38.24;ReadPosRankSum=-2.139;VQSLOD=4.6550;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.25:0,81,1003	0/0:14,0:14:33.10:0,33,408	0/0:26,0:26:72.19:0,72,856	0/0:21,0:21:57.14:0,57,678	1/1:1,17:18:51.17:733,51,0	0/0:25,0:25:66.19:0,66,804	0/0:35,0:35:96.27:0,96,1164	1/1:1,33:34:93.31:1337,93,0	0/0:24,0:24:69.22:0,69,855	0/0:31,0:31:93.29:0,93,1153	0/0:11,0:11:30.09:0,30,372	0/0:24,0:24:63.20:0,63,781	0/0:22,0:22:63.20:0,63,781	0/0:23,0:23:69.20:0,69,842	1/1:0,27:27:81.27:1167,81,0	0/0:17,0:17:51.14:0,51,608	0/0:25,0:25:72.23:0,72,891	0/0:31,0:30:78.22:0,78,952	1/1:1,17:18:51.16:714,51,0	1/1:1,16:17:42.14:604,42,0	1/1:2,57:59:99:2332,163,0	1/1:1,26:27:72.24:1034,72,0	0/0:17,0:17:48.13:0,48,581	0/0:30,0:30:90.28:0,90,1115	0/0:23,0:23:66.19:0,66,804	0/1:4,20:24:7.67:797,0,8	1/1:1,11:12:30.10:431,30,0	1/1:2,19:21:48.16:680,48,0
chr10	104149213	.	TTAAGG	T	5634.47	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.895;DP=629;FS=5.221;HRun=0;HaplotypeScore=124.4373;InbreedingCoeff=0.9989;MQ=74.94;MQ0=0;MQRankSum=-8.684;QD=51.69;ReadPosRankSum=-1.342;VQSLOD=4.8126;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,4235	0/0:12,0:12:36.12:0,36,1184	0/0:26,0:26:78.26:0,78,2381	0/0:16,0:16:43.55:0,44,1341	0/0:20,0:20:60.21:0,60,1888	0/0:16,0:16:48.16:0,48,1546	0/0:17,0:17:51.12:0,51,1571	1/1:0,20:20:60.15:1211,60,0	0/0:21,0:21:63.22:0,63,2094	0/0:29,0:28:84.29:0,84,2712	0/0:13,0:13:39.13:0,39,1293	0/0:22,0:22:66.23:0,66,2090	0/0:27,0:27:81.28:0,81,2649	0/0:23,0:23:69.24:0,69,2265	0/0:20,0:20:60.21:0,60,1946	0/0:40,0:40:99:0,120,3734	0/0:28,0:28:84.29:0,84,2731	0/0:27,0:27:78.26:0,78,2426	1/1:0,18:18:54.14:1099,54,0	1/1:0,20:20:53.99:1099,54,0	1/1:0,24:24:32.84:765,33,0	0/0:17,0:17:48.11:0,48,1416	0/0:24,0:24:72.16:0,72,2230	0/0:26,0:26:78.27:0,78,2542	0/0:16,0:16:48.15:0,48,1432	0/0:26,0:26:78.27:0,78,2577	1/1:0,27:27:63.22:1460,63,0	0/0:8,0:8:21.07:0,21,699
chr10	104149471	.	TAC	T	56.02	PASS	AB=0.944;AC=14;AF=0.259;AN=54;BaseQRankSum=0.838;DP=545;FS=2.113;HRun=0;HaplotypeScore=76.0135;InbreedingCoeff=-0.1116;MQ=63.74;MQ0=22;MQRankSum=0.177;QD=0.24;ReadPosRankSum=0.591;VQSLOD=1.3830;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,1:32:3.70:4,0,305	0/0:11,0:10:15.05:0,15,224	./.	0/1:32,0:20:0:0,0,0	1/1:11,0:13:3.72:16,4,0	0/1:13,0:13:20.92:21,0,123	0/1:17,0:17:35.38:35,0,179	0/1:23,0:22:3.90:4,0,90	0/1:15,0:15:0.32:0,0,222	0/1:24,0:23:16.62:17,0,216	0/1:8,2:10:11.94:12,0,191	0/0:8,0:17:6.01:0,6,71	0/1:11,3:14:14.88:15,0,204	0/0:20,0:20:27.51:0,28,343	0/0:16,0:16:4.16:0,4,26	0/0:13,2:15:20.94:0,21,278	0/0:27,0:26:22.21:0,22,451	0/1:10,3:10:42.87:54,0,43	0/0:17,0:15:15.36:0,15,152	0/0:15,0:15:14.70:0,15,162	0/0:30,0:29:34.75:0,35,391	0/0:25,0:23:11.98:0,12,108	0/1:15,2:17:2.87:3,0,350	0/0:21,0:22:1.39:0,1,167	0/1:11,0:11:6.30:6,0,183	0/0:22,0:22:40.64:0,41,263	0/0:21,0:21:26.53:0,27,304	0/0:20,0:20:14.79:0,15,132
chr10	104149583	.	CGT	C	100.13	PASS	AB=0.982;AC=14;AF=0.318;AN=44;BaseQRankSum=3.079;DP=504;FS=0.000;HRun=0;HaplotypeScore=65.0201;InbreedingCoeff=0.2343;MQ=65.53;MQ0=11;MQRankSum=-0.593;QD=0.61;ReadPosRankSum=0.292;VQSLOD=1.3816;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:6:0,6,65	0/0:10,0:10:3.01:0,3,44	./.	./.	1/1:13,2:15:6.02:63,6,0	1/1:12,0:12:1.82:5,2,0	0/0:26,0:25:2.37:0,2,8	./.	./.	0/0:13,0:13:6.01:0,6,73	0/1:12,0:12:8.10:8,0,18	0/1:20,0:20:4.66:5,0,209	0/0:16,0:16:8.79:0,9,62	0/0:13,0:11:3.01:0,3,43	./.	0/0:18,0:18:5.99:0,6,49	0/1:26,0:25:4.52:5,0,126	0/0:20,0:18:14.96:0,15,151	1/1:21,1:22:5.75:44,6,0	./.	0/0:37,0:35:2.84:0,3,14	1/1:12,1:14:5.85:46,6,0	0/0:14,0:14:2.98:0,3,21	0/1:21,0:21:19.60:20,0,77	0/0:20,0:19:24.06:0,24,309	0/0:20,0:20:1.25:0,1,3	1/1:17,3:19:3:32,3,0	0/0:7,0:6:2.99:0,3,23
chr10	104149885	.	ATT	A	1962.59	PASS	AB=0.567;AC=9;AF=0.161;AN=56;BaseQRankSum=9.070;DP=587;FS=6.330;HRun=10;HaplotypeScore=75.6973;InbreedingCoeff=0.8586;MQ=77.14;MQ0=0;MQRankSum=-2.969;QD=24.53;ReadPosRankSum=3.157;VQSLOD=3.3975;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1834	0/0:10,0:10:30.10:0,30,473	0/0:24,0:23:41.31:0,41,584	0/0:20,0:19:36.05:0,36,484	1/1:3,11:14:36.10:401,36,0	0/0:23,0:23:63.20:0,63,976	0/0:16,0:16:45.15:0,45,714	0/0:34,0:36:90.28:0,90,1356	0/0:21,0:21:57.19:0,57,901	0/0:19,0:19:36.12:0,36,569	0/0:16,0:18:38.09:0,38,521	0/0:18,0:18:48.16:0,48,761	0/0:18,0:19:54.13:0,54,806	0/0:21,0:22:62.70:0,63,957	1/1:3,19:22:57.15:635,57,0	0/0:21,0:22:59.68:0,60,888	0/0:24,0:24:66.22:0,66,1042	0/0:27,0:27:75.23:0,75,1154	0/0:26,0:26:60.20:0,60,945	0/0:15,0:15:39.10:0,39,591	0/0:22,0:23:62.68:0,63,917	1/1:4,15:19:48.12:535,48,0	0/0:10,0:13:29.07:0,29,398	0/0:24,0:24:63.17:0,63,972	0/0:20,0:21:59.69:0,60,913	0/1:4,13:17:47.08:420,0,47	0/0:23,0:23:66.22:0,66,1041	1/1:1,7:8:12.03:134,12,0
chr10	104149949	.	G	GCACA	5371.59	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=0.526;DP=638;FS=14.134;HRun=0;HaplotypeScore=117.7102;InbreedingCoeff=0.9972;MQ=94.10;MQ0=0;MQRankSum=-2.605;QD=62.46;ReadPosRankSum=2.214;VQSLOD=6.5106;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,120,2196	0/0:15,0:15:45.15:0,45,840	0/0:34,0:35:90.27:0,90,1617	0/0:23,0:23:56.20:0,56,967	1/1:2,11:13:18.06:480,18,0	0/0:30,0:30:84.27:0,84,1529	0/0:22,0:22:66.20:0,66,1160	0/0:13,0:13:36.12:0,36,672	0/0:22,0:22:66.21:0,66,1199	0/0:23,0:23:60.19:0,60,1062	0/0:16,0:16:48.16:0,48,896	0/0:17,0:17:48.16:0,48,896	0/0:24,0:24:66.17:0,66,1135	0/0:24,0:24:69.24:0,69,1287	1/1:2,23:25:63.22:1677,63,0	0/0:24,0:24:72.25:0,72,1344	0/0:26,0:26:72.23:0,72,1299	0/0:25,0:25:75.26:0,75,1388	0/0:19,0:19:54.19:0,54,996	0/0:16,0:16:39.13:0,39,728	0/0:34,0:34:99:0,99,1815	1/1:1,19:20:48.16:1277,48,0	0/0:15,0:15:42.14:0,42,783	0/0:34,0:34:99:0,102,1896	0/0:22,0:22:66.19:0,66,1197	1/1:7,21:28:25.27:1938,25,0	0/0:28,0:28:78.22:0,78,1420	./.
chr10	104150267	.	TG	T	2923.45	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.153;DP=715;FS=5.541;HRun=3;HaplotypeScore=82.7053;InbreedingCoeff=0.9854;MQ=63.45;MQ0=0;MQRankSum=-4.463;QD=32.48;ReadPosRankSum=1.129;VQSLOD=4.0467;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,178,2747	0/0:16,0:16:48.16:0,48,767	0/0:27,0:26:78.27:0,78,1247	0/0:22,0:21:63.21:0,63,1001	1/1:1,15:16:30.10:418,30,0	0/0:16,0:16:48.14:0,48,742	0/0:49,0:49:99:0,148,2340	0/0:31,0:31:93.32:0,93,1485	0/0:19,0:19:57.18:0,57,887	0/0:19,0:19:51.17:0,51,805	0/0:8,0:8:24.08:0,24,376	0/0:38,0:38:99:0,114,1809	0/0:28,0:28:84.29:0,84,1342	0/0:32,0:32:96.33:0,96,1534	1/1:0,29:29:84.19:1117,84,0	0/0:18,0:18:54.18:0,54,859	0/0:27,0:26:78.27:0,78,1223	0/0:40,0:40:99:0,120,1901	0/0:19,0:19:57.19:0,57,890	0/0:12,0:12:36.12:0,36,573	0/0:53,0:53:99:0,159,2469	1/1:1,14:15:39.12:520,39,0	0/0:12,0:12:36.11:0,36,551	0/0:36,0:36:99:0,108,1721	0/0:19,0:19:54.18:0,54,857	1/1:1,24:25:27.19:915,27,0	0/0:25,0:25:72.22:0,72,1116	1/1:0,5:5:9.03:125,9,0
chr10	104150701	.	A	AT	3155.70	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.805;DP=656;FS=1.336;HRun=2;HaplotypeScore=77.4166;InbreedingCoeff=0.9399;MQ=84.25;MQ0=0;MQRankSum=-2.456;QD=28.69;ReadPosRankSum=1.572;VQSLOD=3.3010;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:51:99:0,150,1843	0/0:8,0:8:24.08:0,24,297	0/0:26,0:26:59.07:0,59,637	0/0:19,0:18:39.12:0,39,480	1/1:3,14:17:39.61:492,40,0	0/0:24,0:24:72.23:0,72,891	0/0:22,0:22:60.19:0,60,740	0/0:28,0:28:60.17:0,60,720	0/0:25,0:25:72.20:0,72,865	0/0:36,0:36:99:0,105,1291	0/0:21,0:21:63.20:0,63,779	0/0:18,0:18:54.17:0,54,668	0/0:26,0:26:75.21:0,75,903	0/0:11,0:11:30.09:0,30,371	1/1:7,24:31:73.97:904,74,0	0/0:20,0:20:60.18:0,60,730	0/0:29,0:29:84.21:0,84,1010	0/0:21,0:21:57.18:0,57,703	0/0:22,0:22:57.18:0,57,700	0/0:13,0:13:39.12:0,39,481	0/0:30,0:30:84.26:0,84,1040	1/1:3,25:28:79.99:938,80,0	0/0:15,0:15:39.12:0,39,483	0/0:33,0:33:93.29:0,93,1151	0/0:13,0:13:33.10:0,33,409	1/1:6,22:28:0.80:771,1,0	0/0:34,0:34:99:0,99,1197	1/1:0,6:6:18.05:216,18,0
chr10	104151695	.	CGAGCTCAGGGCCCT	C	920.44	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.370;DP=661;FS=0.000;HRun=0;HaplotypeScore=250.4997;InbreedingCoeff=0.8127;MQ=64.32;MQ0=0;MQRankSum=-5.398;QD=102.27;ReadPosRankSum=0.113;VQSLOD=3.2576;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,160,10610	1/1:0,9:9:24.08:1014,24,0	0/0:15,0:15:20.72:0,21,470	0/0:16,0:16:10.56:0,11,484	0/0:11,0:11:5.63:0,6,272	0/0:18,0:18:54.19:0,54,3358	0/0:29,0:29:72.25:0,72,4639	0/0:25,0:25:75.24:0,75,4118	0/0:20,0:20:60.21:0,60,3969	0/0:36,0:36:93.79:0,94,5910	0/0:27,0:27:81.28:0,81,5199	0/0:28,0:28:84.29:0,84,5295	0/0:28,0:28:84.27:0,84,4931	0/0:27,0:27:81.28:0,81,5658	0/0:11,0:11:18.06:0,18,638	0/0:21,0:21:60.19:0,60,3844	0/0:33,0:33:96.33:0,96,6398	0/0:32,0:32:96.33:0,96,6023	0/0:19,0:19:54.16:0,54,3261	0/0:27,0:27:81.28:0,81,5330	0/0:51,0:51:99:0,141,8927	0/0:13,0:13:33.11:0,33,1679	0/0:21,0:21:57.19:0,57,3659	0/0:18,0:18:51.17:0,51,3287	0/0:25,0:25:72.25:0,72,4450	0/0:20,0:20:60.20:0,60,3783	0/0:23,0:23:66.21:0,66,4031	0/0:3,0:3:9.03:0,9,513
chr10	104154239	.	T	TTTTG	6283.58	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-12.057;DP=667;FS=1.349;HRun=0;HaplotypeScore=99.1410;InbreedingCoeff=0.9879;MQ=64.13;MQ0=0;MQRankSum=-2.167;QD=47.97;ReadPosRankSum=-1.148;VQSLOD=5.2420;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:78.23:0,78,1243	0/0:10,0:10:30.08:0,30,476	0/0:14,0:14:32.87:0,33,460	0/0:13,0:12:9.91:0,10,245	0/0:18,0:18:39.08:0,39,597	0/0:27,0:27:54.18:0,54,908	0/0:23,0:23:45.15:0,45,757	1/1:10,15:25:48.97:993,49,0	0/0:14,0:14:24.08:0,24,401	0/0:37,0:37:93.30:0,93,1478	0/0:23,0:23:57.18:0,57,918	0/0:22,0:22:51.16:0,51,829	0/0:28,0:28:69.19:0,69,1082	0/0:20,0:20:42.13:0,42,681	0/0:18,0:18:33.04:0,33,522	0/0:32,0:32:81.26:0,81,1337	0/0:35,0:35:78.17:0,78,1202	0/0:23,0:23:51.16:0,51,821	1/1:7,19:25:54.07:1046,54,0	1/1:4,26:30:30.81:1791,31,0	1/1:2,17:18:45.15:1115,45,0	0/0:30,0:30:81.18:0,81,1300	0/0:26,0:26:75.16:0,75,1127	0/0:30,0:30:63.15:0,63,1003	0/0:17,0:17:42.14:0,42,704	0/0:29,0:29:69.24:0,69,1161	1/1:7,23:29:54.19:1339,54,0	0/0:11,0:11:33.06:0,33,475
chr10	104155102	.	G	GT	5694.25	PASS	AB=0.823;AC=26;AF=0.464;AN=56;BaseQRankSum=17.875;DP=896;FS=0.651;HRun=0;HaplotypeScore=105.1845;InbreedingCoeff=-0.8730;MQ=51.50;MQ0=20;MQRankSum=-17.105;QD=6.85;ReadPosRankSum=0.979;VQSLOD=4.7083;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:61,10:71:99:235,0,2033	0/1:9,3:12:99:107,0,341	0/0:41,0:7:21.06:0,21,242	0/0:24,0:3:8.90:0,9,99	0/1:11,3:14:94.11:94,0,324	0/1:24,4:28:70.97:71,0,792	0/1:32,9:41:99:231,0,1012	0/1:25,3:21:80.51:81,0,674	0/1:35,10:45:99:345,0,1258	0/1:19,7:26:99:260,0,673	0/1:9,0:9:16.78:17,0,269	0/1:31,6:37:99:180,0,1107	0/1:23,12:35:99:468,0,854	0/1:24,13:37:99:511,0,839	0/1:24,7:30:99:199,0,876	0/1:26,7:33:99:238,0,932	0/1:33,9:42:99:307,0,1193	0/1:24,9:31:99:346,0,713	0/1:22,7:24:99:215,0,666	0/1:15,6:21:99:269,0,431	0/1:65,10:72:99:217,0,2147	0/1:18,8:26:99:309,0,582	0/1:4,1:5:35.80:36,0,114	0/1:43,12:54:99:221,0,1531	0/1:20,5:25:99:169,0,679	0/1:25,6:30:99:155,0,879	0/1:17,5:21:99:137,0,532	0/1:13,7:20:99:275,0,467
chr10	104159637	.	CTT	C	1729.90	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=10.724;DP=594;FS=1.343;HRun=15;HaplotypeScore=85.7152;InbreedingCoeff=0.9607;MQ=72.47;MQ0=3;MQRankSum=-3.591;QD=9.45;ReadPosRankSum=4.085;VQSLOD=2.1141;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,1:47:71.82:0,72,1114	0/0:6,0:6:11.97:0,12,125	0/0:28,0:15:22.99:0,23,206	0/0:15,0:9:5.80:0,6,42	1/1:5,13:22:22.98:226,23,0	0/0:13,0:15:41.47:0,41,447	0/0:15,0:19:35.27:0,35,305	1/1:8,0:20:34.20:149,34,0	0/0:19,0:21:50.47:0,50,496	0/0:21,0:22:44.59:0,45,522	0/0:14,0:14:27.07:0,27,350	0/0:28,0:28:53.99:0,54,595	0/0:26,0:28:59.62:0,60,709	0/0:27,0:33:67.20:0,67,650	1/1:5,10:19:23.09:270,23,0	0/0:22,0:24:51.05:0,51,568	0/0:24,0:28:55.94:0,56,536	0/0:17,0:17:41.88:0,42,425	1/1:5,1:21:38.36:177,38,0	1/1:7,0:13:16.01:67,16,0	1/1:7,0:14:12.65:57,13,0	1/1:5,15:22:44.30:411,44,0	0/0:24,0:26:57.86:0,58,590	0/0:19,0:27:67.08:0,67,693	0/0:8,0:10:15.01:0,15,158	1/1:11,16:29:43.32:393,43,0	1/1:6,0:18:27.32:118,27,0	1/1:1,4:5:8.97:79,9,0
chr10	104160768	.	TC	T	5140.52	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.390;DP=681;FS=0.000;HRun=1;HaplotypeScore=70.3364;InbreedingCoeff=0.9972;MQ=92.51;MQ0=0;MQRankSum=-1.935;QD=39.54;ReadPosRankSum=-1.202;VQSLOD=4.8766;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,2185	0/0:7,0:7:21.07:0,21,336	0/0:22,0:22:66.16:0,66,986	0/0:34,0:34:99:0,99,1487	0/0:23,0:23:66.23:0,66,1054	0/0:32,0:31:96.33:0,96,1535	0/0:30,0:30:90.27:0,90,1384	1/1:0,29:29:87.28:1197,87,0	0/0:16,0:16:48.16:0,48,767	0/0:24,0:24:72.24:0,72,1117	0/0:20,0:20:60.20:0,60,938	0/0:27,0:27:81.28:0,81,1285	0/0:23,0:23:69.23:0,69,1089	0/0:24,0:24:72.25:0,72,1151	0/0:25,0:25:75.26:0,75,1199	0/0:16,0:16:48.16:0,48,767	0/0:42,0:42:99:0,126,1977	0/0:25,0:25:75.26:0,75,1196	1/1:0,17:17:51.17:712,51,0	1/1:0,26:26:78.26:1091,78,0	1/1:0,28:28:72.24:1007,72,0	0/0:17,0:17:48.16:0,48,767	0/0:18,0:18:54.18:0,54,846	0/0:33,0:33:96.33:0,96,1535	0/0:18,0:18:54.17:0,54,834	0/0:22,0:22:60.20:0,60,930	1/1:0,30:30:81.27:1133,81,0	0/0:6,0:6:18.06:0,18,288
chr10	104162703	.	A	AGG	393.81	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=2.939;DP=278;FS=0.000;HRun=3;HaplotypeScore=55.8301;InbreedingCoeff=0.5721;MQ=62.81;MQ0=9;MQRankSum=-0.249;QD=9.61;ReadPosRankSum=0.650;VQSLOD=0.2338;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:56.84:0,57,522	./.	0/0:13,0:7:0.75:0,1,57	0/0:16,0:10:14.41:0,14,112	1/1:5,0:5:3:25,3,0	0/0:12,0:12:29.87:0,30,267	0/0:9,0:9:24:0,24,243	0/0:32,0:31:65.63:0,66,523	0/1:12,0:12:35.41:35,0,48	0/0:8,0:8:20.90:0,21,167	0/0:8,0:6:1.74:0,2,18	0/0:4,0:4:6.35:0,6,37	0/0:9,0:9:14.59:0,15,121	0/0:9,0:9:17.21:0,17,148	1/1:8,2:10:20.88:236,21,0	0/0:9,0:9:26.98:0,27,300	0/0:10,0:9:4.90:0,5,255	0/0:8,0:8:23.63:0,24,182	0/0:9,0:8:17.68:0,18,131	0/0:9,0:8:11.54:0,12,69	0/0:10,0:10:8.98:0,9,72	1/1:1,7:8:5.81:107,6,0	0/0:8,0:8:14.96:0,15,124	0/0:11,0:11:26.69:0,27,266	0/0:7,0:7:11.50:0,11,84	1/1:1,5:5:14.88:134,15,0	0/0:10,0:10:19.64:0,20,134	0/0:1,0:1:2.99:0,3,24
chr10	104162705	.	GGA	G	146.16	PASS	AB=0.919;AC=13;AF=0.271;AN=48;BaseQRankSum=3.168;DP=293;FS=10.666;HRun=0;HaplotypeScore=52.6311;InbreedingCoeff=0.1691;MQ=59.93;MQ0=10;MQRankSum=-1.220;QD=1.25;ReadPosRankSum=-0.666;VQSLOD=-0.3357;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:29.54:0,30,377	./.	0/0:16,0:6:2.98:0,3,21	0/0:19,0:10:0.47:0,0,1	./.	0/1:10,2:12:49.59:50,0,122	0/1:7,2:9:51.49:51,0,109	1/1:31,0:30:2.97:20,3,0	0/0:12,0:12:8.18:0,8,185	0/0:8,0:8:0:0,0,0	./.	0/1:4,0:4:0:0,0,0	0/0:9,0:9:3.01:0,3,45	0/0:9,0:9:6.02:0,6,87	0/0:10,0:10:12.01:0,12,108	0/0:9,0:9:15.05:0,15,226	0/0:9,0:9:21.01:0,21,271	0/1:7,1:8:25.74:26,0,128	1/1:9,0:8:5.80:33,6,0	0/1:9,0:8:0:0,0,0	0/1:11,0:11:13.44:17,0,13	0/0:9,0:9:9.47:0,9,81	0/0:9,0:9:3.01:0,3,37	0/1:11,2:12:32.90:33,0,200	./.	0/0:8,0:7:11.89:0,12,110	1/1:11,0:11:5.85:43,6,0	0/0:2,0:2:4.24:0,4,27
chr10	104162734	.	GAGAGAGAGAA	G	1794.03	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=3.783;DP=434;FS=0.733;HRun=0;HaplotypeScore=117.5719;InbreedingCoeff=0.4795;MQ=57.48;MQ0=20;MQRankSum=1.888;QD=15.60;ReadPosRankSum=-0.658;VQSLOD=1.9684;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:69.14:0,69,2245	0/0:4,0:4:11.75:0,12,93	0/0:58,0:17:45.32:0,45,396	0/0:54,0:16:9.98:0,10,286	0/1:9,0:8:41.17:41,0,98	0/0:18,0:18:51.11:0,51,1312	0/0:12,0:12:30.96:0,31,863	1/1:4,14:16:20.02:412,20,0	0/0:14,0:14:33.09:0,33,1225	0/0:10,0:10:29.88:0,30,429	0/0:8,0:7:9.01:0,9,128	0/0:8,0:8:12.51:0,13,260	0/0:9,0:9:12:0,12,254	0/0:17,0:17:42.06:0,42,1020	0/1:14,0:14:99:119,0,430	0/0:13,0:13:36.10:0,36,1281	0/0:15,0:15:45.07:0,45,1480	0/0:14,0:14:42.05:0,42,843	1/1:10,0:10:30.02:444,30,0	1/1:1,5:5:9.03:152,9,0	1/1:16,0:16:31.57:431,32,0	0/1:13,0:13:40.90:41,0,294	0/0:11,0:11:20.64:0,21,423	0/0:16,0:15:36.09:0,36,1245	0/0:11,0:11:24.04:0,24,449	0/1:12,0:12:51.99:52,0,581	1/1:0,10:10:5.65:187,6,0	0/1:7,0:7:70.85:96,0,71
chr10	104165841	.	T	TGAGA	2217.82	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-3.165;DP=594;FS=17.299;HRun=0;HaplotypeScore=116.9670;InbreedingCoeff=0.8084;MQ=65.85;MQ0=17;MQRankSum=-0.765;QD=16.55;ReadPosRankSum=-1.371;VQSLOD=1.6888;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:84.16:0,84,1308	0/0:5,0:5:12.04:0,12,200	0/1:49,0:21:7.44:7,0,227	0/0:74,0:28:19.80:0,20,334	1/1:7,10:16:24.07:591,24,0	0/0:19,0:18:31.32:0,31,477	0/0:22,0:21:48.11:0,48,721	0/0:8,0:16:15.20:0,15,115	0/0:18,0:18:42.01:0,42,636	0/0:24,0:24:48.13:0,48,771	0/0:17,0:17:36.12:0,36,600	0/0:21,0:21:42.14:0,42,682	0/0:11,0:10:15.05:0,15,239	0/0:17,0:17:30.10:0,30,496	1/1:7,18:22:27.09:665,27,0	0/0:15,0:15:42.11:0,42,670	0/0:29,0:29:63.21:0,63,1039	0/0:31,0:31:72.22:0,72,1149	0/0:3,0:4:3:0,3,28	0/0:4,0:11:20.01:0,20,158	0/0:6,0:20:37.90:0,38,324	1/1:11,7:20:20.81:456,21,0	0/0:13,0:13:24.08:0,24,397	0/0:29,0:29:54.14:0,54,869	0/0:14,0:14:27.09:0,27,427	1/1:3,9:14:30.05:593,30,0	0/0:1,0:9:17.51:0,18,137	1/1:2,5:6:3.01:74,3,0
chr10	104165908	.	A	AGAG	1032.86	PASS	AB=0.911;AC=19;AF=0.365;AN=52;BaseQRankSum=2.893;DP=423;FS=48.431;HRun=0;HaplotypeScore=84.8848;InbreedingCoeff=-0.2193;MQ=36.68;MQ0=20;MQRankSum=-4.811;QD=3.76;ReadPosRankSum=0.555;VQSLOD=-0.0517;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,4:17:99:107,0,262	0/0:4,0:4:5.04:0,5,90	./.	0/0:14,0:5:9:0,9,104	0/0:13,0:13:1.45:0,1,161	0/1:22,2:21:85.96:86,0,385	0/1:26,3:25:99:175,0,348	1/1:16,0:9:5.19:43,5,0	0/1:18,3:19:99:125,0,263	0/1:27,5:28:99:317,0,510	0/0:16,0:13:11.98:0,12,327	0/1:15,1:15:17.14:17,0,362	0/1:14,1:12:28.16:28,0,332	0/1:19,0:17:15.87:16,0,334	0/0:15,0:15:0.39:0,0,213	0/0:15,0:15:18.91:0,19,250	0/0:14,0:12:14.08:0,14,190	0/1:12,1:12:99:103,0,214	1/1:12,0:6:9.41:37,9,0	0/1:9,0:7:0.62:1,0,16	./.	0/0:19,0:14:13.35:0,13,300	0/0:9,0:8:3.32:0,3,103	0/1:16,5:20:11:11,0,200	0/0:11,0:10:12.04:0,12,174	0/1:15,1:11:48.98:49,0,117	1/1:4,1:5:2.80:13,3,0	0/1:7,1:7:54.13:54,0,83
chr10	104165921	.	GA	G	97.13	PASS	AC=4;AF=0.083;AN=48;BaseQRankSum=1.343;DP=306;FS=6.286;HRun=1;HaplotypeScore=59.2734;InbreedingCoeff=0.7144;MQ=31.98;MQ0=14;MQRankSum=-2.562;QD=6.07;ReadPosRankSum=-0.060;VQSLOD=0.3042;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:24.08:0,24,365	0/0:3,0:3:9.03:0,9,141	./.	0/0:5,0:2:6.02:0,6,96	0/0:12,0:11:11.86:0,12,139	0/0:19,0:17:39.12:0,39,555	0/0:24,0:20:42.15:0,42,595	./.	0/0:16,0:14:32.99:0,33,405	0/0:27,0:23:60.07:0,60,906	0/0:15,0:12:27.06:0,27,372	0/0:13,0:12:30.09:0,30,429	0/0:14,0:11:30.10:0,30,425	0/0:15,0:13:13.64:0,14,304	0/0:10,0:10:23.73:0,24,280	0/0:9,0:9:19.30:0,19,266	0/0:10,0:9:12.04:0,12,191	0/0:8,0:7:18.06:0,18,271	1/1:4,4:4:12.04:156,12,0	1/1:5,3:6:3.01:41,3,0	./.	0/0:15,0:11:26.76:0,27,341	0/0:8,0:8:15.03:0,15,194	0/0:16,0:15:16.30:0,16,229	0/0:7,0:7:13.59:0,14,181	0/0:10,0:7:18.06:0,18,275	./.	0/0:6,0:5:9.03:0,9,142
chr10	104166022	.	AGAG	A	171.98	PASS	AB=0.954;AC=11;AF=0.196;AN=56;BaseQRankSum=8.361;DP=545;FS=18.400;HRun=0;HaplotypeScore=149.1162;InbreedingCoeff=-0.0942;MQ=35.42;MQ0=41;MQRankSum=-5.283;QD=0.72;ReadPosRankSum=2.284;VQSLOD=1.1659;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,5:30:99:131,0,902	0/0:5,0:5:7.57:0,8,184	0/0:31,0:2:1.55:0,2,4	0/0:24,0:2:6.02:0,6,122	0/1:25,2:23:58.33:58,0,134	0/0:13,0:13:27.09:0,27,514	0/0:25,1:21:26.91:0,27,1092	0/0:17,0:10:5.99:0,6,64	0/0:14,0:11:30.10:0,30,579	0/1:30,2:31:12.03:12,0,1232	0/0:27,0:26:64.76:0,65,1216	0/0:16,0:15:42.04:0,42,696	0/0:13,1:12:0.25:0,0,401	0/0:21,0:19:45.95:0,46,892	0/1:13,0:12:5.12:5,0,12	0/0:17,0:15:33.11:0,33,641	0/0:19,1:19:18.72:0,19,702	0/1:12,0:11:6.67:7,0,407	0/0:11,0:2:3:0,3,28	0/0:15,0:13:11.89:0,12,105	1/1:8,0:6:4.73:16,5,0	0/1:36,0:34:11.19:11,0,258	0/0:24,0:21:43.33:0,43,725	0/1:28,2:28:17.53:18,0,538	0/1:22,2:24:31.75:32,0,809	0/1:20,0:13:19.48:19,0,164	0/0:3,0:2:5.94:0,6,41	0/0:9,0:9:12.44:0,12,107
chr10	104166038	.	GGGGAGGGGGA	G	513.92	PASS	AB=0.974;AC=11;AF=0.204;AN=54;BaseQRankSum=8.277;DP=586;FS=5.110;HRun=0;HaplotypeScore=219.5622;InbreedingCoeff=-0.1246;MQ=37.76;MQ0=29;MQRankSum=-6.938;QD=2.66;ReadPosRankSum=-0.528;VQSLOD=2.3870;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,2:37:99:166,0,2984	0/1:6,1:7:46.57:47,0,782	0/0:39,0:2:2.92:0,3,17	0/0:31,0:7:17.98:0,18,569	0/0:29,0:27:2.05:0,2,826	0/0:18,0:18:45.15:0,45,1488	0/0:34,0:30:84.28:0,84,3433	0/1:7,0:2:14.94:15,0,102	0/0:13,0:12:33.11:0,33,1621	0/0:35,0:35:95.75:0,96,3825	0/0:33,0:33:78.79:0,79,3778	0/0:17,0:16:44.74:0,45,1583	0/0:14,0:12:33.10:0,33,1413	0/0:24,0:24:22.67:0,23,2555	0/0:12,0:12:11.99:0,12,109	0/0:20,0:18:48.16:0,48,2001	0/1:24,0:22:29.82:30,0,1858	0/1:18,0:16:88.46:88,0,1515	./.	0/1:14,0:13:27.25:27,0,277	0/0:5,0:4:5.42:0,5,24	0/1:32,0:30:11.15:11,0,1231	0/0:26,0:24:43.49:0,43,1897	0/1:30,2:31:99:143,0,1688	0/0:26,0:26:59.30:0,59,2811	0/1:19,0:12:89.21:89,0,426	1/1:1,0:1:3.01:39,3,0	0/0:11,0:10:20.21:0,20,525
chr10	104166067	.	G	GGAA	429.43	PASS	AB=0.980;AC=14;AF=0.269;AN=52;BaseQRankSum=10.732;DP=623;FS=70.258;HRun=0;HaplotypeScore=201.7720;InbreedingCoeff=0.0018;MQ=40.68;MQ0=36;MQRankSum=-9.339;QD=1.52;ReadPosRankSum=-0.236;VQSLOD=0.2584;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:43,4:45:93.77:94,0,1238	0/0:10,0:10:0.65:0,1,313	./.	0/0:21,0:5:7.22:0,7,74	0/1:26,0:25:41.96:42,0,163	0/0:23,0:23:47.38:0,47,690	0/0:27,1:27:0.61:0,1,807	1/1:11,1:4:3.01:68,3,0	0/0:16,0:15:16.27:0,16,601	0/1:39,1:39:26.71:27,0,1149	0/0:42,0:41:75.05:0,75,1266	0/0:22,0:21:33.74:0,34,786	0/0:18,1:17:6.82:0,7,551	0/0:24,0:23:5.69:0,6,782	1/1:7,0:7:1.25:3,1,0	0/0:23,1:23:62.98:0,63,853	0/1:33,1:29:20.80:21,0,473	0/1:23,0:20:2.03:2,0,546	./.	1/1:10,0:9:6.86:132,7,0	0/0:4,0:3:2.60:0,3,10	0/1:29,0:28:72.59:73,0,132	0/0:24,0:24:54.61:0,55,712	0/1:37,1:35:30.39:30,0,713	0/0:36,0:34:90.60:0,91,1322	0/1:17,0:13:76.61:77,0,79	0/0:7,0:6:11.88:0,12,109	0/0:12,0:12:11.65:0,12,103
chr10	104166068	.	G	GAGA	606.09	PASS	AB=0.948;AC=16;AF=0.308;AN=52;BaseQRankSum=8.703;DP=628;FS=73.237;HRun=0;HaplotypeScore=202.9953;InbreedingCoeff=-0.2899;MQ=40.62;MQ0=35;MQRankSum=-6.948;QD=1.55;ReadPosRankSum=-1.942;VQSLOD=-0.5580;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:43,4:45:99:195,0,1274	0/1:10,1:11:40.82:41,0,327	./.	0/1:21,0:5:10.89:11,0,45	0/1:26,0:25:90.64:91,0,237	0/1:21,3:24:4.79:5,0,646	0/1:30,1:29:1.72:2,0,805	1/1:12,0:4:2.94:18,3,0	0/1:15,1:15:26.60:27,0,567	0/1:38,1:38:11.67:12,0,1228	0/0:42,0:41:66.89:0,67,1325	0/1:21,1:21:2.39:2,0,773	0/0:20,0:18:41.54:0,42,613	0/0:23,1:23:5.71:0,6,784	0/0:7,0:7:2.62:0,3,12	0/0:23,0:22:63.02:0,63,858	0/1:29,4:28:90.40:90,0,483	0/1:21,3:21:99:125,0,551	./.	0/0:10,0:9:16.39:0,16,116	0/0:4,0:3:2.60:0,3,10	0/1:29,0:28:14.34:14,0,317	0/0:25,0:26:41.60:0,42,693	0/1:34,3:34:96.41:96,0,715	0/0:36,0:34:68.52:0,69,1236	0/1:17,0:13:19.69:20,0,181	0/0:7,0:6:14.91:0,15,147	0/0:12,0:12:16.34:0,16,197
chr10	104166073	.	GGAA	G	305.92	PASS	AB=0.967;AC=11;AF=0.212;AN=52;BaseQRankSum=9.565;DP=625;FS=4.251;HRun=0;HaplotypeScore=190.4442;InbreedingCoeff=0.0337;MQ=42.00;MQ0=36;MQRankSum=-9.257;QD=1.52;ReadPosRankSum=-2.422;VQSLOD=2.0125;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:48,0:46:0.56:1,0,1621	0/0:10,0:10:20.35:0,20,373	./.	0/0:22,0:6:2.98:0,3,24	0/1:23,0:23:81.84:82,0,101	0/0:26,0:26:35.14:0,35,906	0/0:32,0:29:72.02:0,72,978	0/0:15,0:4:2.04:0,2,6	0/0:15,0:14:41.97:0,42,785	0/0:36,0:35:56.93:0,57,1194	0/0:38,0:37:66.85:0,67,1371	0/0:23,0:22:36.59:0,37,962	0/0:20,0:18:44.56:0,45,614	0/1:23,1:23:19.56:20,0,836	0/1:6,0:6:0.07:0,0,0	0/0:24,0:23:60.09:0,60,972	0/0:30,0:25:7.11:0,7,588	0/1:21,0:20:0.66:1,0,699	./.	1/1:6,4:9:10.61:97,11,0	0/0:4,0:3:7.18:0,7,42	0/1:29,1:29:33.40:33,0,176	0/0:24,0:24:42.02:0,42,673	0/0:36,0:32:8.41:0,8,839	0/0:37,0:35:72.28:0,72,1323	0/1:18,0:13:67.65:68,0,152	0/1:5,2:6:31.32:82,0,31	0/1:13,0:13:53.48:53,0,64
chr10	104166212	.	AAGC	A	387.99	PASS	AB=0.964;AC=13;AF=0.250;AN=52;BaseQRankSum=0.968;DP=607;FS=1.050;HRun=0;HaplotypeScore=89.0166;InbreedingCoeff=-0.1266;MQ=41.89;MQ0=75;MQRankSum=-6.946;QD=1.62;ReadPosRankSum=-3.183;VQSLOD=0.6550;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:35:16.18:0,16,553	0/0:10,0:9:14.40:0,14,151	./.	./.	0/0:20,0:15:9.79:0,10,102	0/0:28,0:23:64.99:0,65,570	0/0:35,0:22:25.80:0,26,293	1/1:14,0:10:15.55:38,16,0	0/0:30,0:26:74.75:0,75,735	0/0:30,0:26:22.35:0,22,451	0/0:13,0:11:12.55:0,13,117	0/1:27,0:23:3.20:3,0,150	0/0:29,0:27:76.84:0,77,631	0/0:30,0:28:68.69:0,69,640	0/1:29,0:24:22.42:22,0,160	0/0:32,0:30:83.40:0,83,735	0/0:33,1:28:29.92:0,30,522	0/0:27,0:15:8.54:0,9,252	0/1:11,0:8:12.15:20,0,12	0/1:16,0:12:19.23:19,0,56	0/0:5,0:4:2.94:0,3,18	0/1:13,3:9:53.77:54,0,86	0/1:16,0:13:25.66:26,0,117	0/1:37,0:28:39.72:40,0,224	0/1:16,1:14:78.12:78,0,188	0/1:19,2:16:99:155,0,219	0/1:16,0:11:12.48:13,0,12	0/1:17,2:13:69.66:70,0,156
chr10	104166215	.	CAGA	C	768.84	PASS	AB=0.964;AC=14;AF=0.280;AN=50;BaseQRankSum=3.179;DP=624;FS=3.376;HRun=0;HaplotypeScore=92.9246;InbreedingCoeff=0.2823;MQ=41.79;MQ0=78;MQRankSum=-2.301;QD=2.90;ReadPosRankSum=-1.762;VQSLOD=1.7603;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:45,1:36:32.01:32,0,418	0/0:9,0:8:10.73:0,11,48	./.	./.	0/0:19,0:14:9.14:0,9,77	0/0:28,0:23:33.11:0,33,503	0/0:36,0:23:12.04:0,12,185	./.	0/0:30,0:26:45.15:0,45,697	0/0:31,0:27:1.39:0,1,434	0/0:12,0:9:6.02:0,6,92	1/1:24,3:23:14.98:157,15,0	0/0:31,0:29:24.08:0,24,364	0/0:28,0:26:33.11:0,33,510	1/1:28,3:26:16.32:198,16,0	0/0:32,0:30:33.11:0,33,512	0/0:33,0:27:42.08:0,42,228	0/1:28,1:17:7.37:7,0,380	0/0:17,0:14:17.87:0,18,151	0/0:14,0:11:11.98:0,12,138	0/0:7,0:6:3:0,3,25	0/1:16,1:10:51.92:52,0,79	0/1:15,2:14:20.08:101,0,20	1/1:35,3:28:14.23:207,14,0	1/1:18,0:15:7.37:60,7,0	0/1:23,0:18:75.19:75,0,97	0/0:15,0:10:5.91:0,6,38	0/1:19,0:13:37.46:41,0,37
chr10	104166448	.	C	CACATAT	7415.09	PASS	AB=0.641;AC=17;AF=0.304;AN=56;BaseQRankSum=-6.982;DP=760;FS=15.340;HRun=0;HaplotypeScore=186.3783;InbreedingCoeff=0.8205;MQ=56.73;MQ0=11;MQRankSum=-7.928;QD=37.45;ReadPosRankSum=-3.619;VQSLOD=3.0612;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:91.21:0,91,2240	0/0:18,0:18:51.16:0,51,1143	0/0:51,0:34:84.26:0,84,1647	0/0:66,0:37:69.54:0,70,1872	0/1:2,10:13:0.01:0,0,0	0/0:26,0:25:63.22:0,63,1413	0/0:39,0:39:99:0,114,2612	1/1:5,33:40:99:3501,108,0	0/0:34,0:33:87.28:0,87,1972	0/0:32,0:32:93.31:0,93,2143	0/0:11,0:11:30.10:0,30,689	0/0:29,0:29:65.73:0,66,1487	0/0:21,0:21:57.13:0,57,1212	0/0:32,0:31:90.27:0,90,2005	1/1:8,22:31:21.06:729,21,0	0/0:33,0:33:96.32:0,96,2164	0/0:21,0:20:42.20:0,42,1228	0/0:27,0:27:78.22:0,78,1716	1/1:3,9:11:27.09:806,27,0	0/1:3,1:4:0:0,0,0	0/1:13,25:44:33.67:79,0,34	1/1:3,7:10:6.02:194,6,0	0/0:17,0:17:47.89:0,48,1105	0/0:48,0:48:99:0,108,2461	0/0:13,0:13:33.11:0,33,823	1/1:6,14:22:48.61:1290,49,0	1/1:0,10:9:18.06:603,18,0	1/1:5,2:7:6.02:213,6,0
chr10	104166512	.	C	CACACAT	4075.59	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=0.897;DP=903;FS=0.000;HRun=0;HaplotypeScore=205.5304;InbreedingCoeff=0.5236;MQ=52.44;MQ0=44;MQRankSum=-5.166;QD=14.77;ReadPosRankSum=-0.905;VQSLOD=2.6035;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,132,1940	0/0:21,0:20:48.04:0,48,853	0/0:71,0:13:31.13:0,31,264	0/0:65,0:18:34.03:0,34,347	0/1:11,0:12:35.23:35,0,58	0/0:25,0:24:56.07:0,56,815	0/0:38,0:38:71.61:0,72,1378	1/1:44,0:41:99:957,107,0	0/0:34,0:33:84.01:0,84,1367	0/0:38,0:38:99:0,105,1360	0/0:10,0:9:23.99:0,24,422	0/0:33,0:33:71.64:0,72,1068	0/0:27,0:27:77.60:0,78,1241	0/0:35,0:34:99:0,99,1653	0/1:32,0:33:68.76:494,0,69	0/0:39,0:38:99:0,105,1673	0/0:27,0:26:78.02:0,78,1329	0/0:27,0:27:26.06:0,26,947	1/1:17,0:13:26.61:285,27,0	1/1:1,18:20:6.49:171,6,0	1/1:59,1:61:77.99:693,78,0	0/1:20,0:21:39.09:39,0,211	0/0:17,0:17:41.72:0,42,555	0/0:44,0:46:99:0,105,1864	0/0:22,0:22:50.92:0,51,721	0/1:35,0:37:99:634,0,430	1/1:11,2:14:41.94:687,42,0	0/1:12,0:12:80.59:81,0,146
chr10	104168245	.	CA	C	3005.10	PASS	AB=0.536;AC=9;AF=0.161;AN=56;BaseQRankSum=11.269;DP=621;FS=17.733;HRun=4;HaplotypeScore=61.7046;InbreedingCoeff=0.8668;MQ=82.63;MQ0=0;MQRankSum=-1.080;QD=28.90;ReadPosRankSum=1.726;VQSLOD=1.9511;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,153,2101	0/0:13,0:13:36.11:0,36,486	0/0:13,0:14:29.31:0,29,407	0/0:22,0:22:54.16:0,54,683	1/1:0,22:22:51.15:612,51,0	0/0:18,0:18:48.15:0,48,651	0/0:29,0:29:84.25:0,84,1137	0/0:18,0:18:51.16:0,51,696	0/0:19,0:19:57.19:0,57,798	0/0:20,0:20:60.19:0,60,819	0/0:15,0:15:42.14:0,42,588	0/0:26,0:26:78.26:0,78,1092	0/0:21,0:21:63.20:0,63,861	0/0:18,0:18:51.15:0,51,677	1/1:1,13:14:36.11:432,36,0	0/0:20,0:20:57.18:0,57,783	0/0:33,0:33:99:0,99,1363	0/0:20,0:20:60.18:0,60,822	0/0:28,0:28:78.25:0,78,1076	0/0:28,0:28:81.26:0,81,1110	0/0:18,0:18:54.18:0,54,754	1/1:1,29:30:84.22:990,84,0	0/0:14,0:14:39.13:0,39,543	0/0:19,0:19:57.19:0,57,798	0/0:25,0:25:66.22:0,66,924	0/1:4,26:30:38.80:848,0,39	0/0:27,0:27:81.27:0,81,1123	1/1:0,8:8:24.07:288,24,0
chr10	104170921	.	TCACACACACACA	T	4304.25	PASS	AB=0.581;AC=17;AF=0.304;AN=56;BaseQRankSum=11.427;DP=939;FS=0.000;HRun=0;HaplotypeScore=307.5286;InbreedingCoeff=0.7467;MQ=59.90;MQ0=18;MQRankSum=-5.042;QD=14.30;ReadPosRankSum=0.263;VQSLOD=2.9609;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:49:99:0,109,5705	0/0:15,0:18:51.17:0,51,2375	0/0:82,0:27:32.09:0,32,1601	0/0:84,0:28:41.02:0,41,1762	0/1:5,0:26:0.13:0,0,0	0/0:33,0:35:81.26:0,81,3566	0/0:29,0:32:75.23:0,75,3356	1/1:9,25:34:78.07:1180,78,0	0/0:43,0:46:99:0,114,5590	0/0:31,0:31:80.08:0,80,3375	0/0:19,0:20:36.12:0,36,1372	0/0:36,0:38:95.88:0,96,4772	0/0:28,0:30:75.26:0,75,3840	0/0:26,0:28:76.99:0,77,3842	0/1:14,0:39:43.56:44,0,124	0/0:22,0:22:48.15:0,48,2288	0/0:23,0:25:75.24:0,75,3559	0/0:19,0:23:60.10:0,60,2751	1/1:8,15:22:45.11:1161,45,0	1/1:8,28:37:27.56:891,28,0	1/1:15,35:50:5.68:117,6,0	1/1:2,0:20:1.63:4,2,0	0/0:26,0:29:57.20:0,57,2627	0/0:30,0:30:63.19:0,63,2841	0/0:14,0:13:21.07:0,21,1189	0/1:8,0:28:0.50:1,0,299	1/1:5,25:30:26.97:904,27,0	1/1:1,0:13:1.25:3,1,0
chr10	104171158	.	TAC	T	6143.95	PASS	AB=0.924;AC=23;AF=0.411;AN=56;BaseQRankSum=13.180;DP=786;FS=4.971;HRun=0;HaplotypeScore=100.3390;InbreedingCoeff=0.7424;MQ=56.35;MQ0=14;MQRankSum=0.882;QD=17.50;ReadPosRankSum=1.344;VQSLOD=4.9353;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,1:41:36.71:0,37,1050	0/0:13,0:13:33.10:0,33,496	0/0:39,0:15:2.90:0,3,144	0/0:31,0:15:18.05:0,18,261	1/1:5,21:24:42.13:497,42,0	0/0:30,0:30:75.26:0,75,1184	0/1:20,2:22:16.50:17,0,694	1/1:13,15:27:42.11:486,42,0	0/0:32,2:34:7.19:0,7,1070	0/0:40,2:42:34.35:0,34,1449	0/0:19,0:19:39.13:0,39,616	0/0:27,0:27:33.67:0,34,985	0/0:28,0:28:78.25:0,78,1203	0/0:21,1:22:21.63:0,22,783	1/1:3,30:32:75.23:888,75,0	0/0:21,0:21:45.15:0,45,704	0/0:28,2:30:16.11:0,16,718	0/1:20,2:22:25.87:26,0,531	1/1:10,6:15:20.90:227,21,0	1/1:8,24:32:57.17:670,57,0	1/1:4,27:33:29.76:765,30,0	1/1:6,23:29:63.05:746,63,0	0/0:20,2:22:9.59:0,10,601	0/0:34,1:35:51.40:0,51,1211	0/1:28,2:30:8.09:8,0,784	1/1:7,23:30:69.21:817,69,0	1/1:6,26:32:69.12:785,69,0	1/1:9,7:15:18.05:213,18,0
chr10	104171940	.	G	GC	5135.43	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-10.294;DP=573;FS=8.355;HRun=8;HaplotypeScore=55.5457;InbreedingCoeff=0.9969;MQ=83.05;MQ0=0;MQRankSum=-2.681;QD=27.03;ReadPosRankSum=-1.579;VQSLOD=4.7974;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:89.86:0,90,793	0/0:8,0:8:21.01:0,21,192	0/0:28,0:27:30.96:0,31,425	0/0:16,0:16:22.87:0,23,175	1/1:1,7:8:21.06:242,21,0	0/0:19,0:19:54.02:0,54,492	0/0:31,0:31:58.18:0,58,667	1/1:4,10:14:30.05:323,30,0	0/0:22,0:22:54:0,54,490	0/0:20,0:20:53.96:0,54,482	0/0:10,0:10:24.01:0,24,220	0/0:19,0:19:54.03:0,54,494	0/0:17,0:17:48.01:0,48,436	0/0:13,0:13:33.02:0,33,302	1/1:3,18:22:57:637,57,0	0/0:24,0:24:66.03:0,66,604	0/0:37,0:37:99:0,105,956	0/0:31,0:31:75.01:0,75,681	1/1:3,14:18:44.91:474,45,0	1/1:3,12:15:36.11:415,36,0	1/1:3,30:33:78.18:879,78,0	1/1:2,16:19:23.30:506,23,0	0/0:12,0:12:36.02:0,36,329	0/0:24,0:24:63.01:0,63,570	0/0:21,0:21:57.03:0,57,522	1/1:6,26:32:75.21:855,75,0	1/1:3,17:20:23.69:526,24,0	1/1:0,9:9:24.07:277,24,0
chr10	104172550	.	GCA	G	2498.83	PASS	AB=0.886;AC=31;AF=0.554;AN=56;BaseQRankSum=13.305;DP=644;FS=5.105;HRun=0;HaplotypeScore=116.7463;InbreedingCoeff=0.2410;MQ=60.70;MQ0=8;MQRankSum=-1.633;QD=4.93;ReadPosRankSum=-0.216;VQSLOD=2.1702;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,5:35:38.67:39,0,717	0/0:9,0:9:15.04:0,15,207	0/0:23,0:14:6.02:0,6,70	0/0:18,0:7:3.01:0,3,46	1/1:11,0:24:15.61:69,16,0	0/0:22,0:26:19.88:0,20,565	0/1:31,3:34:21.97:22,0,520	1/1:28,5:33:15.02:159,15,0	0/0:17,0:17:5.94:0,6,355	0/1:21,8:29:99:213,0,424	0/0:22,0:24:27.75:0,28,526	0/1:20,2:23:5.79:6,0,504	0/1:18,1:22:2.80:3,0,546	0/1:18,1:19:0.68:1,0,419	1/1:5,0:16:25.57:126,26,0	0/1:20,0:20:25.35:25,0,496	0/1:24,6:30:53.23:53,0,522	0/1:28,3:32:79.08:79,0,717	1/1:6,7:12:21.06:237,21,0	1/1:9,13:22:39.11:439,39,0	1/1:12,10:22:27.08:304,27,0	1/1:16,0:26:17.04:84,17,0	0/1:20,3:23:0.21:0,0,418	0/1:19,2:22:34.54:35,0,373	0/0:19,0:19:23.35:0,23,748	1/1:14,0:29:42.70:212,43,0	1/1:10,14:24:51.08:549,51,0	1/1:4,0:7:5.68:28,6,0
chr10	104173160	.	C	CTT	3071.72	PASS	AB=0.736;AC=17;AF=0.304;AN=56;BaseQRankSum=-3.994;DP=539;FS=9.983;HRun=12;HaplotypeScore=78.3332;InbreedingCoeff=0.4454;MQ=71.28;MQ0=1;MQRankSum=0.863;QD=12.44;ReadPosRankSum=-3.857;VQSLOD=0.6902;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:40.53:0,41,520	0/0:9,0:9:17.98:0,18,162	0/1:23,0:20:0.55:1,0,159	0/1:13,0:10:7.29:7,0,97	1/1:4,15:20:38.51:468,39,0	0/0:13,0:16:17.46:0,17,244	0/0:23,0:25:47.27:0,47,449	1/1:15,9:27:17.39:269,17,0	0/0:14,0:14:32.98:0,33,305	0/0:23,0:26:33.38:0,33,323	0/0:6,0:7:11.68:0,12,95	0/0:15,0:17:17.26:0,17,134	0/0:16,0:16:16.62:0,17,237	0/0:10,0:10:17.91:0,18,166	0/1:4,11:16:7.22:198,0,7	0/0:9,0:11:26.49:0,26,218	0/0:24,0:26:62.39:0,62,545	0/0:23,0:25:56.30:0,56,467	0/1:18,9:27:28.65:268,0,29	1/1:5,13:21:25.94:404,26,0	0/1:11,14:28:99:357,0,112	1/1:6,14:22:32.30:495,32,0	0/0:13,0:15:17.57:0,18,197	0/0:28,0:32:80.01:0,80,681	0/0:12,0:12:36.04:0,36,333	0/1:7,15:27:15.80:516,0,16	0/1:3,5:11:18.79:150,0,19	1/1:4,4:9:9.03:123,9,0
chr10	104173845	.	C	CTG	2163.28	PASS	AB=0.963;AC=18;AF=0.321;AN=56;BaseQRankSum=4.898;DP=781;FS=38.563;HRun=0;HaplotypeScore=305.5778;InbreedingCoeff=-0.0021;MQ=40.91;MQ0=8;MQRankSum=-4.931;QD=4.97;ReadPosRankSum=-4.360;VQSLOD=1.4430;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:23.90:0,24,415	0/1:13,0:13:1.58:2,0,93	0/0:23,0:13:27.01:0,27,276	0/0:31,0:14:14.97:0,15,144	1/1:29,7:36:11.87:157,12,0	0/0:26,0:26:12.05:0,12,241	0/0:19,0:20:4.34:0,4,189	0/1:42,0:41:99:152,0,493	0/1:34,0:34:13.88:14,0,331	0/1:32,0:32:4.80:5,0,523	0/0:19,0:19:10.68:0,11,117	0/1:26,0:26:16.01:16,0,198	0/0:28,0:28:3.75:0,4,331	0/0:34,0:35:21.82:0,22,414	1/1:14,27:42:36.12:588,36,0	0/0:19,0:18:20.16:0,20,250	0/0:20,0:19:26.09:0,26,325	0/1:9,0:9:17.75:18,0,130	0/1:33,0:32:92.09:92,0,475	0/0:31,0:31:5.84:0,6,105	0/0:33,0:32:46.56:0,47,583	1/1:34,8:42:26.22:299,26,0	0/1:29,0:29:12.15:12,0,31	0/1:14,0:15:13.47:13,0,91	0/0:25,0:25:0.34:0,0,5	0/1:31,13:43:99:818,0,138	0/1:26,0:27:7.48:7,0,364	0/1:8,3:11:61.81:136,0,62
chr10	104173852	.	T	TGA	1719.48	PASS	AB=0.887;AC=18;AF=0.321;AN=56;BaseQRankSum=10.113;DP=800;FS=47.445;HRun=0;HaplotypeScore=262.0491;InbreedingCoeff=0.1391;MQ=38.30;MQ0=9;MQRankSum=-6.916;QD=4.13;ReadPosRankSum=-3.590;VQSLOD=1.3628;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,1:39:20.16:0,20,542	0/1:12,2:14:15.88:16,0,120	0/0:22,0:12:36.07:0,36,480	0/0:25,0:9:24.04:0,24,291	1/1:29,6:35:12.70:80,13,0	0/0:27,1:28:15.24:0,15,343	0/0:18,4:22:11.95:0,12,289	0/1:41,6:46:99:391,0,841	0/0:31,3:34:15.61:0,16,465	0/0:36,0:36:60.58:0,61,983	0/0:19,3:22:5.20:0,5,130	0/0:21,3:24:1:0,1,290	0/0:25,4:29:2.58:0,3,470	0/0:34,1:35:39.97:0,40,583	1/1:37,4:41:39.86:367,40,0	0/0:16,3:18:20.03:0,20,333	0/1:20,0:19:0.51:1,0,407	0/1:6,2:8:38.99:39,0,167	0/1:34,3:35:99:198,0,711	0/1:22,10:32:7.91:8,0,143	0/0:33,0:32:38.43:0,38,765	1/1:41,4:44:27.14:154,27,0	0/1:21,8:29:1.56:2,0,39	0/0:15,1:16:9.54:0,10,138	1/1:18,6:24:5.52:18,6,0	0/1:42,3:44:99:485,0,413	0/1:24,3:27:58.47:58,0,502	0/1:12,0:12:71.97:72,0,83
chr10	104173863	.	G	GA	1943.98	PASS	AB=0.734;AC=15;AF=0.268;AN=56;BaseQRankSum=13.092;DP=752;FS=105.328;HRun=0;HaplotypeScore=219.1962;InbreedingCoeff=-0.2493;MQ=35.92;MQ0=8;MQRankSum=-8.789;QD=5.04;ReadPosRankSum=1.440;VQSLOD=0.4062;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:35:51.50:0,52,487	0/1:8,6:14:4.64:5,0,78	0/0:18,0:9:27.08:0,27,341	0/0:17,0:5:15.04:0,15,182	0/0:12,18:37:1.84:0,2,75	0/0:20,3:26:12.51:0,13,214	0/0:14,4:20:5.23:0,5,176	0/1:27,17:46:99:641,0,872	0/1:23,5:32:5.42:5,0,237	0/1:32,2:35:99:142,0,725	0/0:6,5:23:2.01:0,2,75	0/0:11,5:24:17.81:0,18,274	0/1:18,7:27:0.77:1,0,343	0/0:22,8:33:13.31:0,13,356	0/0:28,8:38:20.19:0,20,272	0/0:12,4:16:20.83:0,21,205	0/1:15,2:17:64.44:64,0,286	0/1:6,2:8:33.20:33,0,135	0/1:19,10:27:99:365,0,472	0/1:11,16:31:8.89:9,0,94	0/0:32,0:31:45.10:0,45,602	0/1:17,17:43:8.94:9,0,148	0/0:8,19:30:1.58:0,2,49	0/0:13,2:16:11.91:0,12,103	1/1:7,14:23:4.13:8,4,0	0/1:25,11:38:99:602,0,640	0/1:17,6:27:38.31:38,0,355	0/1:4,6:12:99:163,0,141
chr10	104173864	.	G	GGT	85.50	PASS	AB=0.899;AC=12;AF=0.214;AN=56;BaseQRankSum=7.662;DP=747;FS=60.667;HRun=0;HaplotypeScore=235.6901;InbreedingCoeff=-0.0700;MQ=35.76;MQ0=8;MQRankSum=-6.015;QD=0.28;ReadPosRankSum=1.358;VQSLOD=0.7964;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,1:35:29.98:0,30,422	0/1:14,0:14:0.92:1,0,113	0/0:18,0:9:26.98:0,27,317	0/0:17,0:5:15.03:0,15,182	0/1:34,0:37:0.14:0,0,81	0/0:24,0:26:9.34:0,9,201	0/1:18,2:20:5.74:6,0,168	0/0:43,2:45:19.98:0,20,1193	0/0:29,2:32:14.41:0,14,223	0/0:38,0:38:81.21:0,81,989	0/1:17,1:23:7.36:7,0,78	0/1:18,5:23:48.16:48,0,180	0/0:25,1:26:5.03:0,5,294	0/0:29,2:32:19.48:0,19,343	0/1:36,1:38:4.81:5,0,178	0/0:15,1:15:0.49:0,0,147	0/0:16,1:16:26.62:0,27,331	0/0:7,0:7:11.71:0,12,157	0/0:29,0:27:66.57:0,67,730	0/1:29,1:31:24.55:25,0,96	0/0:31,0:30:41.29:0,41,609	0/1:36,2:43:10.57:11,0,145	0/1:28,1:30:18.55:19,0,43	0/0:15,0:16:4.03:0,4,76	1/1:23,0:23:9.85:33,10,0	0/0:36,2:38:6.10:0,6,712	0/1:23,3:27:65.74:66,0,391	0/0:12,0:12:14.67:0,15,137
chr10	104231571	.	G	GTCA	260.94	PASS	AB=0.975;AC=18;AF=0.346;AN=52;BaseQRankSum=3.008;DP=235;FS=17.696;HRun=0;HaplotypeScore=84.5504;InbreedingCoeff=-0.4861;MQ=28.33;MQ0=14;MQRankSum=-2.136;QD=1.82;ReadPosRankSum=1.119;VQSLOD=0.5122;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:4:13.20:13,0,31	./.	./.	0/0:7,0:1:2.94:0,3,18	1/1:3,0:3:1.80:6,2,0	0/1:14,0:13:69.64:70,0,111	0/0:11,0:9:4.01:0,4,124	0/1:9,0:7:49.92:50,0,65	0/1:5,0:5:6.62:7,0,83	0/1:7,0:7:12.16:12,0,16	0/0:2,0:2:1.82:0,2,5	0/1:12,1:13:44.37:44,0,189	0/1:6,1:7:35.84:36,0,97	0/1:9,0:9:11.75:12,0,116	0/1:8,0:7:8.63:9,0,106	0/1:9,0:8:17.43:17,0,74	0/1:7,1:8:28.33:28,0,123	0/1:9,1:6:19.78:20,0,171	0/1:14,0:8:19.63:20,0,130	0/0:5,0:4:7.41:0,7,43	0/0:38,0:32:4.54:0,5,72	0/1:7,0:7:13.31:18,0,13	0/0:7,0:6:6.10:0,6,16	0/0:11,1:12:1.72:0,2,98	0/1:9,0:8:13.66:14,0,18	0/1:7,0:6:22.13:22,0,69	0/0:5,0:5:2.41:0,2,90	0/0:2,0:2:6.01:0,6,68
chr10	104232507	.	GGAAAAAAAAAAA	G	820.85	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=4.712;DP=365;FS=0.946;HRun=0;HaplotypeScore=107.6415;InbreedingCoeff=0.6563;MQ=43.05;MQ0=48;MQRankSum=-5.478;QD=12.25;ReadPosRankSum=3.535;VQSLOD=2.0378;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:33.11:0,33,1825	0/0:3,0:3:6.02:0,6,311	./.	0/0:18,0:2:6.02:0,6,172	1/1:11,3:12:7.31:257,7,0	0/0:17,0:16:24.96:0,25,1277	0/0:15,0:14:24.08:0,24,1088	0/0:9,0:8:0.20:0,0,11	0/0:9,0:8:12.03:0,12,356	0/0:21,0:20:21.06:0,21,901	0/0:13,0:12:18.05:0,18,886	0/0:14,0:12:18.82:0,19,727	0/0:7,0:6:14.79:0,15,536	0/0:4,0:3:3.01:0,3,153	1/1:4,4:7:6.02:196,6,0	0/0:8,0:7:8.89:0,9,338	0/0:29,0:26:42.08:0,42,1762	0/0:25,0:21:29.92:0,30,1277	1/1:20,0:15:14.02:210,14,0	0/0:12,0:11:2.74:0,3,12	0/0:15,0:12:5.78:0,6,150	1/1:10,0:9:1.90:11,2,0	0/0:14,0:13:19.31:0,19,1019	0/0:15,0:10:21.07:0,21,967	0/0:13,0:13:24.07:0,24,926	1/1:12,0:10:12.01:198,12,0	0/0:6,0:4:1.25:0,1,3	1/1:2,1:2:3.01:98,3,0
chr10	104232521	.	AAAAAAAAAAAG	A	1381.51	PASS	AB=0.985;AC=15;AF=0.268;AN=56;BaseQRankSum=5.801;DP=497;FS=0.575;HRun=0;HaplotypeScore=130.0146;InbreedingCoeff=0.4631;MQ=43.17;MQ0=53;MQRankSum=-2.635;QD=10.88;ReadPosRankSum=0.186;VQSLOD=1.9459;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:57.66:0,58,2706	0/0:9,0:9:24.04:0,24,997	0/0:36,0:6:17.03:0,17,233	0/0:45,0:7:12.15:0,12,232	0/1:12,0:11:75.42:185,0,75	0/0:18,0:17:42.58:0,43,1845	0/0:19,0:18:20.57:0,21,1445	1/1:2,10:11:21.86:179,22,0	0/0:10,0:9:21.07:0,21,703	0/0:18,0:17:39.11:0,39,1580	0/0:15,0:14:2.44:0,2,1085	0/0:18,0:17:39.91:0,40,1266	0/0:8,0:7:16.30:0,16,611	0/0:14,0:12:27.06:0,27,998	0/1:9,0:8:29.05:138,0,29	0/0:10,0:9:17.89:0,18,454	0/0:39,0:36:58.37:0,58,2564	0/0:29,0:24:25.97:0,26,1896	1/1:11,14:19:29.45:539,29,0	1/1:4,9:12:20.80:168,21,0	0/1:11,1:9:83.82:84,0,112	0/1:14,0:13:6.25:6,0,66	0/0:16,0:15:35.18:0,35,1353	0/0:19,0:14:36.03:0,36,1273	0/0:21,0:21:26.51:0,27,2029	0/1:18,0:17:98.29:98,0,202	1/1:9,0:7:7.27:83,7,0	1/1:3,0:2:2.58:75,3,0
chr10	104232671	.	TCATCACCAC	T	1329.20	PASS	AB=0.649;AC=9;AF=0.161;AN=56;BaseQRankSum=5.640;DP=690;FS=0.694;HRun=0;HaplotypeScore=147.6214;InbreedingCoeff=0.8848;MQ=47.00;MQ0=74;MQRankSum=-6.266;QD=10.07;ReadPosRankSum=-2.061;VQSLOD=2.4785;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:44:94.18:0,94,2946	0/0:6,0:6:17.63:0,18,407	0/0:26,0:2:5.04:0,5,38	0/0:39,0:11:13.67:0,14,534	0/0:18,0:15:26.98:0,27,799	0/0:15,0:11:22.54:0,23,979	0/0:46,0:42:99:0,105,3432	1/1:17,16:22:8.64:635,9,0	0/0:20,0:20:51.16:0,51,2030	0/0:16,0:12:30.07:0,30,758	0/0:15,0:12:17.91:0,18,447	0/0:19,0:17:42.14:0,42,1703	0/0:16,0:12:30.10:0,30,1008	0/0:15,0:14:38.14:0,38,1232	0/0:25,0:23:36.07:0,36,1088	0/0:20,0:20:51.15:0,51,1709	0/0:30,0:28:75.21:0,75,2479	0/0:39,0:38:86.64:0,87,3546	1/1:21,1:12:18.02:264,18,0	1/1:11,6:14:15.05:285,15,0	0/1:22,26:32:0.02:0,0,0	0/0:17,0:11:21.04:0,21,656	0/0:17,0:11:18.04:0,18,543	0/0:51,0:51:99:0,123,4160	0/0:18,0:15:39.13:0,39,1520	0/0:27,0:23:54.18:0,54,1822	1/1:7,5:9:15.05:295,15,0	0/0:12,0:12:24.07:0,24,610
chr10	104232707	.	ACATCATCAT	A	2732.93	PASS	AC=20;AF=0.385;AN=52;BaseQRankSum=11.193;DP=738;FS=10.813;HRun=0;HaplotypeScore=184.2876;InbreedingCoeff=0.9071;MQ=51.66;MQ0=27;MQRankSum=-4.314;QD=12.37;ReadPosRankSum=-3.262;VQSLOD=1.1980;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:81.28:0,81,2746	0/0:4,0:4:6.02:0,6,172	./.	./.	1/1:6,10:16:18.24:153,18,0	0/0:16,0:16:42.14:0,42,1652	0/0:41,0:41:44.80:0,45,1537	1/1:30,0:24:2.97:21,3,0	0/0:21,0:21:27.09:0,27,1020	0/0:15,0:14:27.09:0,27,1032	0/0:8,0:7:12.04:0,12,496	0/0:29,0:29:48.16:0,48,1978	0/0:16,0:15:30.10:0,30,1157	0/0:16,0:16:21.07:0,21,782	1/1:6,22:27:35.65:732,36,0	0/0:18,0:18:27.09:0,27,1008	0/0:34,0:33:60.21:0,60,2469	0/0:45,0:45:78.08:0,78,3033	1/1:18,7:21:24.02:464,24,0	1/1:7,10:17:23.75:298,24,0	1/1:29,4:25:5.61:40,6,0	1/1:5,8:13:11.91:131,12,0	0/0:14,0:14:21.07:0,21,784	0/0:51,0:51:99:0,105,3920	0/0:22,0:22:39.13:0,39,1322	1/1:15,0:33:34.73:440,35,0	1/1:6,4:8:6.02:163,6,0	1/1:5,9:14:18.06:490,18,0
chr10	104234295	.	GT	G	3107.61	PASS	AB=0.778;AC=20;AF=0.357;AN=56;BaseQRankSum=9.555;DP=593;FS=0.741;HRun=11;HaplotypeScore=62.6548;InbreedingCoeff=0.6235;MQ=73.99;MQ0=0;MQRankSum=-0.700;QD=12.89;ReadPosRankSum=0.306;VQSLOD=3.4804;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:37:80.50:0,80,1005	0/0:11,0:11:30.07:0,30,314	0/0:21,0:18:34.81:0,35,340	0/1:15,0:15:32.63:33,0,107	1/1:6,14:20:4.08:227,4,0	0/0:18,0:21:44.77:0,45,437	0/0:19,0:20:39.11:0,39,555	1/1:5,28:33:58.63:608,59,0	0/0:26,0:26:69.14:0,69,720	0/0:29,0:29:72.15:0,72,747	0/0:14,0:18:47.90:0,48,464	0/0:17,2:20:4.50:0,5,412	0/1:15,2:17:7.21:7,0,326	0/0:27,2:29:49.35:0,49,709	1/1:2,15:17:32.90:271,33,0	0/0:14,0:15:41.83:0,42,414	0/0:20,2:23:4.62:0,5,423	0/0:16,0:18:21.71:0,22,349	0/1:10,10:20:19.45:205,0,19	1/1:2,13:15:9.14:264,9,0	1/1:0,11:11:26.97:222,27,0	1/1:4,16:20:21.58:321,22,0	0/0:24,1:26:46.07:0,46,626	0/0:19,0:18:51.12:0,51,538	0/0:18,0:19:38.92:0,39,391	1/1:6,25:31:10.22:447,10,0	1/1:4,27:31:77.91:640,78,0	0/1:2,9:11:19.73:62,0,20
chr10	104234953	.	TAC	T	253.83	PASS	AB=0.893;AC=21;AF=0.438;AN=48;BaseQRankSum=6.033;DP=665;FS=30.197;HRun=0;HaplotypeScore=80.6672;InbreedingCoeff=-0.0127;MQ=65.77;MQ0=22;MQRankSum=-1.481;QD=0.86;ReadPosRankSum=4.403;VQSLOD=-0.4249;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,3:41:11.60:0,12,348	0/1:9,0:10:21.27:21,0,85	./.	./.	0/1:9,3:12:31.67:58,0,32	0/1:19,0:19:1.96:2,0,108	0/0:38,2:40:0.12:0,0,302	0/1:19,0:24:0:0,0,0	0/0:21,0:21:24.02:0,24,288	0/0:18,0:18:5.97:0,6,45	./.	0/0:17,0:17:2.98:0,3,21	0/1:26,3:29:5.32:5,0,221	0/0:23,0:23:1.93:0,2,177	1/1:15,8:23:3.01:32,3,0	0/1:15,1:16:16.82:17,0,123	0/0:30,4:34:12.68:0,13,461	0/1:18,3:20:19.79:20,0,77	1/1:11,0:14:5.68:28,6,0	0/1:11,0:15:0:0,0,0	./.	0/1:16,1:17:23.31:23,0,57	0/0:13,0:13:17.81:0,18,192	0/1:34,3:37:61.04:61,0,210	0/1:16,2:18:17.35:17,0,79	1/1:12,3:15:3:32,3,0	1/1:7,0:15:7.98:41,8,0	1/1:10,1:11:3.01:32,3,0
chr10	104235881	.	ACCCCCTCCTGG	A	1012.28	PASS	AB=1.000;AC=11;AF=0.262;AN=42;BaseQRankSum=5.057;DP=82;FS=0.000;HRun=0;HaplotypeScore=36.2930;InbreedingCoeff=0.5717;MQ=95.52;MQ0=0;MQRankSum=-2.829;QD=48.20;ReadPosRankSum=0.374;VQSLOD=2.4981;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:15.05:0,15,808	./.	0/1:4,0:4:1.38:2,0,1	0/0:6,0:6:1.92:0,2,8	0/0:3,0:3:9.03:0,9,491	1/1:0,3:3:9.03:293,9,0	1/1:0,3:3:9.03:227,9,0	./.	0/0:3,0:3:9.03:0,9,491	0/0:2,0:2:3.01:0,3,133	0/0:4,0:4:9.03:0,9,386	./.	0/0:1,0:1:3.01:0,3,154	0/0:2,0:3:9.03:0,9,418	0/0:4,0:4:12.04:0,12,646	0/0:3,0:3:6.02:0,6,327	0/0:10,0:10:27.09:0,27,1363	0/0:3,0:3:9.03:0,9,338	1/1:2,5:7:15.03:331,15,0	./.	./.	0/0:3,0:3:9.03:0,9,492	./.	0/0:3,0:3:3.01:0,3,164	1/1:0,2:2:3.01:98,3,0	0/0:1,0:1:3.01:0,3,164	1/1:0,2:2:6.02:195,6,0	./.
chr10	104237423	.	A	AG	4972.48	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=15.175;DP=644;FS=3.804;HRun=2;HaplotypeScore=77.6773;InbreedingCoeff=0.9994;MQ=75.23;MQ0=0;MQRankSum=-1.473;QD=39.78;ReadPosRankSum=-0.489;VQSLOD=5.0460;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1712	0/0:12,0:12:36.12:0,36,503	0/0:13,0:13:39.09:0,39,500	0/0:18,0:18:47.97:0,48,516	0/0:18,0:18:54.18:0,54,755	0/0:21,0:21:63.21:0,63,881	0/0:26,0:26:78.20:0,78,1019	1/1:1,19:20:57.11:747,57,0	0/0:21,0:21:63.21:0,63,881	0/0:19,0:19:51.17:0,51,712	0/0:19,0:19:54.18:0,54,754	0/0:19,0:19:57.19:0,57,796	0/0:22,0:22:66.21:0,66,904	0/0:28,0:28:81.24:0,81,1096	0/0:23,0:23:66.19:0,66,888	0/0:22,0:22:66.22:0,66,923	0/0:42,0:42:99:0,126,1709	0/0:26,0:26:78.19:0,78,1065	1/1:0,18:18:54.15:755,54,0	1/1:1,17:18:54.17:756,54,0	1/1:2,45:47:99:1860,133,0	0/0:24,0:24:72.22:0,72,971	0/0:10,0:10:30.10:0,30,420	0/0:46,0:46:99:0,135,1869	0/0:17,0:17:51.16:0,51,696	0/0:23,0:23:63.20:0,63,862	1/1:3,19:22:60.20:854,60,0	0/0:8,0:8:24.08:0,24,336
chr10	104238116	.	T	TGA	5123.30	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-11.907;DP=600;FS=9.404;HRun=0;HaplotypeScore=68.1208;InbreedingCoeff=0.9910;MQ=96.63;MQ0=0;MQRankSum=-3.129;QD=49.26;ReadPosRankSum=-0.414;VQSLOD=5.2004;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,157,2271	0/0:8,0:8:24.08:0,24,353	0/0:39,0:39:83.44:0,83,1517	0/0:18,0:18:48.12:0,48,662	0/0:17,0:17:48.14:0,48,687	0/0:17,0:17:48.15:0,48,686	0/0:24,0:24:66.21:0,66,952	1/1:0,24:25:75.23:1303,75,0	0/0:25,0:25:72.21:0,72,1017	0/0:28,0:28:81.26:0,81,1170	0/0:7,0:7:21.03:0,21,283	0/0:19,0:19:57.18:0,57,817	0/0:22,0:22:60.20:0,60,884	0/0:28,0:28:81.25:0,81,1165	0/0:20,0:20:54.18:0,54,795	0/0:20,0:20:60.20:0,60,875	0/0:26,0:26:75.21:0,75,1060	0/0:25,0:25:75.21:0,75,1075	1/1:1,21:22:63.20:1131,63,0	1/1:0,4:5:12.04:225,12,0	1/1:2,25:27:66.23:1236,66,0	0/0:19,0:19:51.17:0,51,746	0/0:18,0:18:48.16:0,48,703	0/0:26,0:26:78.26:0,78,1149	0/0:10,0:10:30.10:0,30,432	0/0:18,0:18:51.17:0,51,745	1/1:2,21:25:66.23:1227,66,0	0/0:9,0:9:27.09:0,27,398
chr10	104239726	.	G	GAA	2052.49	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.335;DP=664;FS=1.738;HRun=10;HaplotypeScore=82.6381;InbreedingCoeff=0.9647;MQ=72.63;MQ0=1;MQRankSum=-1.827;QD=28.12;ReadPosRankSum=-0.829;VQSLOD=3.7900;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:48:99:0,120,1264	0/0:11,0:11:30.06:0,30,305	0/0:9,0:10:20.34:0,20,174	0/0:13,0:13:7.60:0,8,147	0/0:37,0:37:93.17:0,93,942	1/1:2,20:24:54.18:789,54,0	1/1:8,22:32:62.18:869,62,0	0/0:27,0:27:53.06:0,53,535	0/0:33,0:33:84.11:0,84,834	0/0:33,0:33:75.11:0,75,763	0/0:20,0:20:48.09:0,48,488	0/0:30,0:30:72.11:0,72,732	0/0:14,0:14:42.10:0,42,427	0/0:18,0:18:18.40:0,18,428	0/0:32,0:32:84.14:0,84,848	0/0:13,0:13:23.97:0,24,237	0/0:22,0:22:57.11:0,57,580	0/0:21,0:21:57.10:0,57,579	0/0:16,0:15:39.04:0,39,395	0/0:31,0:31:75.11:0,75,763	0/0:14,0:14:30.03:0,30,305	0/0:27,0:27:58.75:0,59,608	0/0:27,0:27:66.08:0,66,663	0/0:25,0:26:56.83:0,57,632	1/1:2,13:16:36.12:537,36,0	0/0:30,0:30:78.14:0,78,793	0/0:27,0:27:75.14:0,75,763	0/0:9,0:10:17.72:0,18,164
chr10	104240677	.	C	CTAGA	9234.76	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.594;DP=734;FS=4.368;HRun=0;HaplotypeScore=110.5715;InbreedingCoeff=0.9981;MQ=81.06;MQ0=0;MQRankSum=-8.060;QD=64.13;ReadPosRankSum=-3.174;VQSLOD=5.5840;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,2191	0/0:16,0:16:48.15:0,48,863	0/0:21,0:21:54.15:0,54,976	0/0:24,0:24:60.64:0,61,1070	0/0:38,0:38:99:0,108,1935	0/0:25,0:25:72.20:0,72,1266	0/0:34,0:34:93.32:0,93,1762	1/1:7,22:30:87.30:2213,87,0	0/0:30,0:30:81.25:0,81,1463	0/0:23,0:23:63.21:0,63,1167	0/0:17,0:17:51.16:0,51,936	0/0:24,0:24:69.22:0,69,1270	0/0:21,0:21:63.20:0,63,1129	0/0:22,0:22:66.23:0,66,1237	0/0:26,0:26:78.27:0,78,1473	0/0:31,0:31:90.31:0,90,1693	0/0:41,0:41:99:0,120,2110	0/0:30,0:30:87.28:0,87,1618	1/1:7,23:32:87.30:2111,87,0	1/1:2,22:26:57.20:1489,57,0	1/1:7,25:34:62.94:1689,63,0	0/0:18,0:18:48.16:0,48,911	0/0:20,0:20:51.14:0,51,903	0/0:34,0:34:99:0,102,1883	0/0:17,0:17:51.16:0,51,920	0/0:27,0:27:78.27:0,78,1467	1/1:1,21:22:66.23:1733,66,0	0/0:7,0:7:18.06:0,18,317
chr10	104241142	.	TC	T	13911.39	PASS	AB=0.914;AC=54;AF=0.964;AN=56;BaseQRankSum=-4.389;DP=543;FS=8.112;HRun=4;HaplotypeScore=97.7861;InbreedingCoeff=-0.0368;MQ=68.38;MQ0=10;MQRankSum=-1.388;QD=25.62;ReadPosRankSum=3.388;VQSLOD=3.4857;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,42:45:99:1404,117,0	1/1:1,4:5:6.02:72,6,0	0/1:26,2:11:49.31:49,0,167	0/1:29,4:15:3.56:127,0,4	1/1:0,15:15:42.13:504,42,0	1/1:0,20:20:57.17:683,57,0	1/1:1,29:30:78.24:935,78,0	1/1:11,13:20:39.02:432,39,0	1/1:0,21:21:54.17:648,54,0	1/1:2,10:12:30.08:349,30,0	1/1:0,10:10:18.06:216,18,0	1/1:0,19:19:51.16:612,51,0	1/1:1,15:16:45.14:539,45,0	1/1:2,16:18:42.13:504,42,0	1/1:2,22:24:54.17:647,54,0	1/1:1,12:13:30.09:360,30,0	1/1:3,25:28:43.47:773,43,0	1/1:0,15:15:39.12:468,39,0	1/1:2,11:13:33.07:360,33,0	1/1:1,7:8:21.06:249,21,0	1/1:4,19:17:15.51:174,16,0	1/1:2,14:16:39.12:468,39,0	1/1:0,8:7:21.02:236,21,0	1/1:1,32:33:87.10:1043,87,0	1/1:0,10:10:24.07:288,24,0	1/1:0,23:23:66.16:775,66,0	1/1:2,4:6:15.03:169,15,0	1/1:1,25:26:69.21:827,69,0
chr10	104241186	.	TC	T	833.06	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.758;DP=715;FS=1.364;HRun=2;HaplotypeScore=122.9844;InbreedingCoeff=0.9106;MQ=60.17;MQ0=45;MQRankSum=-8.376;QD=15.15;ReadPosRankSum=-2.725;VQSLOD=2.7031;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,111,1631	0/0:2,0:2:6.02:0,6,85	0/0:118,1:28:56.93:0,57,651	0/0:133,0:34:54.22:0,54,771	0/0:16,0:16:42.14:0,42,615	0/0:17,0:17:48.15:0,48,684	0/0:30,0:31:84.13:0,84,1141	1/1:15,4:19:47.35:485,47,0	0/0:19,0:19:24.29:0,24,635	0/0:14,0:14:36.11:0,36,507	0/0:12,0:12:29.91:0,30,439	0/0:18,0:17:42.14:0,42,625	0/0:14,0:14:42.14:0,42,623	0/0:19,0:19:54.17:0,54,777	0/0:18,0:18:48.15:0,48,699	0/0:18,0:18:48.15:0,48,675	0/0:28,0:27:71.26:0,71,994	0/0:19,0:19:48.12:0,48,679	1/1:11,0:10:28.20:273,28,0	1/1:2,2:4:3.01:31,3,0	1/1:14,0:12:8.30:70,8,0	0/0:13,0:13:33.11:0,33,485	0/0:11,0:11:30.10:0,30,439	0/0:40,0:39:99:0,114,1677	0/0:9,0:9:21.07:0,21,315	0/0:16,0:16:48.16:0,48,715	1/1:6,1:7:13.85:135,14,0	0/0:32,0:32:87.29:0,87,1272
chr10	104241187	.	C	CT	913.66	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.942;DP=717;FS=3.807;HRun=1;HaplotypeScore=127.5221;InbreedingCoeff=0.9091;MQ=61.58;MQ0=44;MQRankSum=-7.869;QD=16.03;ReadPosRankSum=-3.491;VQSLOD=2.7168;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,1535	0/0:2,0:2:6.02:0,6,82	0/0:119,1:30:48.53:0,49,621	0/0:132,0:35:46.10:0,46,777	0/0:16,0:16:42.14:0,42,582	0/0:17,0:17:48.15:0,48,648	0/0:31,0:31:83.95:0,84,1097	1/1:6,11:20:49.17:517,49,0	0/0:19,0:19:15.92:0,16,591	0/0:14,0:14:36.11:0,36,481	0/0:13,0:13:29.91:0,30,412	0/0:18,0:17:42.14:0,42,586	0/0:14,0:14:42.14:0,42,584	0/0:20,0:20:54.16:0,54,733	0/0:18,0:18:48.15:0,48,651	0/0:18,0:18:48.15:0,48,646	0/0:28,0:27:70.32:0,70,924	0/0:19,0:19:46.94:0,47,615	1/1:5,7:11:31.21:301,31,0	1/1:2,2:4:3.01:34,3,0	1/1:6,7:12:8.40:74,8,0	0/0:13,0:13:33.11:0,33,458	0/0:11,0:11:30.10:0,30,415	0/0:39,0:38:99:0,114,1577	0/0:9,0:9:21.07:0,21,292	0/0:16,0:16:48.16:0,48,670	1/1:3,4:7:14.41:150,14,0	0/0:32,0:32:87.29:0,87,1202
chr10	104241190	.	CT	C	918.88	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.032;DP=721;FS=1.265;HRun=1;HaplotypeScore=126.7335;InbreedingCoeff=0.9483;MQ=63.77;MQ0=43;MQRankSum=-7.472;QD=14.82;ReadPosRankSum=-3.729;VQSLOD=2.1223;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,1823	0/0:2,0:2:6.02:0,6,86	0/0:118,2:32:46.20:0,46,797	0/0:132,0:38:67.68:0,68,999	0/0:18,0:18:42.14:0,42,641	0/0:18,0:18:48.16:0,48,748	0/0:32,0:32:84.23:0,84,1271	1/1:9,14:23:59.05:563,59,0	0/0:17,0:17:33.98:0,34,641	0/0:15,0:15:39.13:0,39,604	0/0:13,0:13:29.91:0,30,469	0/0:17,0:16:42.14:0,42,671	0/0:14,0:14:42.14:0,42,661	0/0:19,0:19:54.18:0,54,863	0/0:18,0:18:48.16:0,48,767	0/0:16,0:16:42.14:0,42,662	0/0:26,0:25:68.72:0,69,1054	0/0:20,0:20:48.16:0,48,753	1/1:4,8:11:24.47:234,24,0	1/1:3,3:6:9.01:93,9,0	1/1:6,8:12:12.48:76,12,0	0/0:14,0:14:36.11:0,36,544	0/0:12,0:12:30.10:0,30,480	0/0:38,0:37:99:0,111,1744	0/0:9,0:9:21.07:0,21,336	0/0:16,0:16:48.16:0,48,758	1/1:3,4:7:13.26:120,13,0	0/0:31,0:31:87.30:0,87,1369
chr10	104241191	.	T	TC	1280.21	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=3.314;DP=729;FS=0.580;HRun=1;HaplotypeScore=127.0465;InbreedingCoeff=0.9494;MQ=64.89;MQ0=43;MQRankSum=-6.444;QD=19.11;ReadPosRankSum=-4.213;VQSLOD=2.4832;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1464	0/0:2,0:2:6.02:0,6,77	0/0:119,0:33:50.16:0,50,625	0/0:135,0:39:70.41:0,70,808	0/0:18,0:18:42.12:0,42,529	0/0:18,0:18:48.16:0,48,621	0/0:32,0:32:84.02:0,84,1031	1/1:23,1:24:59.93:709,60,0	0/0:17,0:17:41.97:0,42,519	0/0:15,0:15:39.12:0,39,492	0/0:13,0:13:29.91:0,30,387	0/0:17,0:16:42.14:0,42,545	0/0:14,0:14:42.14:0,42,542	0/0:19,0:19:54.18:0,54,700	0/0:18,0:18:48.16:0,48,623	0/0:16,0:16:42.12:0,42,531	0/0:27,0:26:66.21:0,66,856	0/0:20,0:20:47.52:0,48,593	1/1:13,1:12:31.64:356,32,0	1/1:5,1:6:9.02:102,9,0	1/1:15,1:14:11.92:116,12,0	0/0:14,0:14:36.07:0,36,450	0/0:12,0:12:30.10:0,30,389	0/0:38,0:37:99:0,111,1420	0/0:9,0:9:21.07:0,21,273	0/0:16,0:16:48.16:0,48,623	1/1:6,0:7:14.72:165,15,0	0/0:31,0:31:81.26:0,81,1051
chr10	104241435	.	CG	C	8257.94	PASS	AB=0.714;AC=53;AF=0.946;AN=56;BaseQRankSum=-3.352;DP=255;FS=7.006;HRun=1;HaplotypeScore=76.1876;InbreedingCoeff=0.2906;MQ=68.97;MQ0=0;MQRankSum=-1.194;QD=34.12;ReadPosRankSum=2.173;VQSLOD=4.6240;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:33.11:461,33,0	1/1:0,2:2:6.02:84,6,0	0/1:6,4:6:43.14:70,0,43	0/0:12,1:6:4.72:0,5,16	1/1:0,2:2:6.02:84,6,0	1/1:0,5:5:15.05:210,15,0	1/1:1,11:12:33.06:423,33,0	1/1:0,8:8:24.08:326,24,0	1/1:0,13:13:36.08:476,36,0	1/1:0,5:5:15.05:210,15,0	1/1:0,3:3:6.02:84,6,0	1/1:2,11:13:39.10:511,39,0	1/1:1,11:12:36.11:477,36,0	1/1:0,16:16:45.15:628,45,0	1/1:2,8:10:27.08:361,27,0	1/1:1,7:8:0.70:192,1,0	1/1:0,9:9:24:292,24,0	1/1:5,8:13:27.56:440,28,0	1/1:1,6:7:19.31:254,19,0	1/1:0,5:5:15.05:209,15,0	1/1:2,26:26:60.20:839,60,0	1/1:0,6:6:15.04:209,15,0	1/1:0,7:6:18.06:252,18,0	1/1:1,10:11:27.03:355,27,0	1/1:0,3:3:6.02:84,6,0	1/1:0,12:12:30.10:419,30,0	1/1:0,5:5:12.04:166,12,0	1/1:1,3:4:12:146,12,0
chr10	104241511	.	TGAC	T	191.90	PASS	AB=0.853;AC=15;AF=0.313;AN=48;BaseQRankSum=4.510;DP=163;FS=9.367;HRun=0;HaplotypeScore=74.8684;InbreedingCoeff=-0.2101;MQ=92.63;MQ0=0;MQRankSum=-0.234;QD=2.11;ReadPosRankSum=-2.662;VQSLOD=0.0942;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:6,1:7:14.19:14,0,115	./.	0/1:19,0:14:11.39:11,0,228	0/0:14,0:9:5.96:0,6,156	0/1:3,1:4:23.14:23,0,39	0/0:4,0:4:12.04:0,12,177	1/1:3,0:3:6.85:46,7,0	0/0:2,0:1:3:0,3,27	0/0:13,0:12:30.05:0,30,435	0/0:4,0:4:12.04:0,12,151	./.	0/1:7,0:7:41.91:42,0,160	0/1:10,0:10:5.15:5,0,200	0/1:7,1:10:8.52:9,0,169	0/1:2,2:3:33.34:45,0,33	0/1:6,1:7:11.76:12,0,147	0/0:2,0:2:5.99:0,6,64	0/0:5,0:5:15.05:0,15,223	1/1:2,0:2:0.58:23,1,0	0/0:3,0:3:5.98:0,6,67	0/0:15,1:14:21.95:0,22,330	0/0:3,0:3:9.03:0,9,137	0/1:2,1:3:40.83:41,0,65	0/1:8,0:9:31.11:31,0,146	./.	0/0:3,0:3:3.01:0,3,42	0/1:4,1:4:28.62:29,0,76	./.
chr10	104241514	.	CTG	C	82.98	PASS	AB=0.957;AC=11;AF=0.229;AN=48;BaseQRankSum=5.916;DP=152;FS=0.000;HRun=0;HaplotypeScore=72.3514;InbreedingCoeff=-0.2288;MQ=100.98;MQ0=0;MQRankSum=-1.362;QD=1.05;ReadPosRankSum=-1.499;VQSLOD=1.3023;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:4,1:5:20.09:20,0,89	./.	0/1:18,1:14:7.48:7,0,262	0/1:16,0:11:36.36:36,0,183	0/0:3,1:4:1.53:0,2,35	0/0:4,0:4:12.04:0,12,147	1/1:1,1:2:2.92:8,3,0	0/0:2,0:1:3:0,3,27	0/0:12,0:11:30:0,30,339	0/0:4,0:4:12.03:0,12,135	./.	0/1:4,1:5:11.70:12,0,120	0/0:9,0:8:18:0,18,182	0/1:9,0:9:15.73:16,0,122	0/1:4,0:3:24.16:26,0,24	0/1:7,0:7:24.51:25,0,123	0/0:2,0:2:6.01:0,6,65	0/0:5,0:5:15.04:0,15,176	0/0:2,0:2:1.24:0,1,17	0/0:2,0:2:6.02:0,6,78	0/0:17,0:15:24.05:0,24,265	0/0:3,0:3:9.03:0,9,109	0/1:3,0:3:18.28:18,0,53	0/1:9,0:9:42.87:43,0,108	./.	0/0:1,0:1:3.01:0,3,31	0/0:4,0:3:4.24:0,4,64	./.
chr10	104242782	.	ACC	A	678.22	PASS	AB=0.867;AC=11;AF=0.262;AN=42;BaseQRankSum=0.749;DP=105;FS=9.260;HRun=9;HaplotypeScore=23.1705;InbreedingCoeff=0.4870;MQ=107.34;MQ0=1;MQRankSum=-0.026;QD=15.77;ReadPosRankSum=2.289;VQSLOD=-0.0926;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:10:21.03:0,21,302	0/0:2,0:2:6.02:0,6,98	0/1:11,2:12:27.67:28,0,252	0/0:9,1:8:4.30:0,4,189	0/0:3,0:3:6.02:0,6,98	0/0:1,0:1:3.01:0,3,49	0/0:6,0:6:14.92:0,15,212	1/1:2,4:6:9.02:105,9,0	0/0:2,0:2:6.02:0,6,87	0/0:2,0:2:3.01:0,3,46	./.	./.	0/0:2,0:2:6.02:0,6,80	0/0:2,0:2:6.02:0,6,97	./.	0/0:3,0:3:2.97:0,3,20	0/0:1,0:1:0.47:0,0,1	./.	1/1:0,3:3:9.03:105,9,0	1/1:0,2:2:6.02:70,6,0	1/1:1,14:15:39.11:454,39,0	0/0:1,0:1:3.01:0,3,49	./.	0/0:11,0:11:26.88:0,27,366	0/0:2,0:2:6.02:0,6,94	./.	1/1:1,3:4:5.97:55,6,0	./.
chr10	104244687	.	AGTGT	A	2171.47	PASS	AB=0.724;AC=13;AF=0.232;AN=56;BaseQRankSum=6.751;DP=873;FS=0.498;HRun=0;HaplotypeScore=152.7236;InbreedingCoeff=0.6961;MQ=68.99;MQ0=13;MQRankSum=-0.942;QD=9.01;ReadPosRankSum=-3.397;VQSLOD=2.4639;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,1:48:41.12:0,41,1624	0/0:15,0:14:39.10:0,39,822	0/1:36,1:24:24.87:25,0,104	0/0:43,0:20:20.91:0,21,186	0/0:27,1:32:28.09:0,28,1360	0/1:9,2:20:18.67:19,0,97	0/0:10,0:28:49.40:0,49,222	1/1:14,15:30:44.87:465,45,0	0/0:26,0:28:66.29:0,66,1463	0/0:29,0:34:59.60:0,60,1059	0/0:19,0:20:29.65:0,30,620	0/0:32,0:34:71.92:0,72,1449	0/0:31,0:33:86.67:0,87,1611	0/0:23,0:24:59.64:0,60,1196	0/0:37,0:41:99:0,100,2014	0/0:32,0:33:80.93:0,81,1623	0/0:26,0:30:71.28:0,71,1196	0/0:28,0:28:39.90:0,40,1204	1/1:12,15:27:39.36:587,39,0	1/1:5,16:21:15.02:246,15,0	1/1:14,37:51:27.09:444,27,0	0/0:28,0:31:68.45:0,68,1161	0/0:20,0:19:42.02:0,42,595	0/0:35,0:35:72.14:0,72,1402	0/1:8,2:27:48.76:49,0,162	0/0:37,0:37:74.91:0,75,1247	1/1:5,15:21:33.11:521,33,0	0/0:30,0:31:74.67:0,75,1556
chr10	104245660	.	GCACACACACACA	G	2065.95	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.900;DP=789;FS=2.862;HRun=0;HaplotypeScore=248.1741;InbreedingCoeff=0.9749;MQ=61.87;MQ0=6;MQRankSum=-0.596;QD=15.53;ReadPosRankSum=-2.385;VQSLOD=2.3108;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:62:99:0,141,6558	0/0:11,0:11:30.10:0,30,1594	0/0:29,0:17:30.10:0,30,942	0/0:38,0:17:23.39:0,23,608	0/0:19,0:22:54.19:0,54,2506	0/0:8,0:18:24.08:0,24,1063	0/0:16,0:38:69.24:0,69,3244	1/1:10,19:29:50.56:690,51,0	0/0:25,0:26:69.24:0,69,3480	0/0:16,0:20:51.17:0,51,2193	0/0:11,0:11:27.08:0,27,1185	0/0:32,0:34:90.31:0,90,4428	0/0:20,0:21:51.18:0,51,2870	0/0:30,0:33:78.27:0,78,4035	0/0:12,0:16:42.14:0,42,2101	0/0:18,0:20:54.19:0,54,2614	0/0:38,0:42:99:0,103,5003	0/0:25,0:32:78.22:0,78,3779	1/1:4,10:15:29.94:549,30,0	1/1:5,9:13:8.76:152,9,0	1/1:21,45:66:12.40:397,12,0	0/0:19,0:19:48.15:0,48,2451	0/0:21,0:21:54.16:0,54,2403	0/0:57,0:65:99:0,144,7147	0/0:9,0:24:39.13:0,39,1852	0/0:28,0:31:87.25:0,87,3722	1/1:3,6:9:17.40:447,17,0	0/0:20,0:22:63.22:0,63,3470
chr10	104246725	.	GCA	G	1483.69	PASS	AB=0.840;AC=33;AF=0.635;AN=52;BaseQRankSum=1.242;DP=539;FS=5.171;HRun=0;HaplotypeScore=80.2509;InbreedingCoeff=0.1916;MQ=57.32;MQ0=15;MQRankSum=1.568;QD=3.67;ReadPosRankSum=2.891;VQSLOD=1.5803;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,4:38:12.20:12,0,163	1/1:5,0:10:8.69:60,9,0	./.	./.	1/1:11,1:13:8.85:74,9,0	0/0:13,0:13:14.80:0,15,143	0/1:22,0:22:12.27:12,0,98	0/0:26,0:25:6.80:0,7,40	1/1:13,2:15:11.80:101,12,0	1/1:18,0:19:6.22:46,6,0	0/1:10,0:10:0.03:0,0,0	0/1:21,8:29:18.77:26,0,19	1/1:11,6:18:11.86:111,12,0	0/1:12,5:18:29.71:78,0,30	1/1:8,7:15:6.96:66,7,0	0/1:10,10:21:3.20:126,0,3	1/1:20,9:27:17.07:168,17,0	0/1:24,4:30:17.48:216,0,17	0/1:13,1:14:23.40:23,0,44	0/0:6,0:9:8.76:0,9,76	0/0:19,0:25:8.93:0,9,68	1/1:8,4:12:6.01:65,6,0	0/1:6,4:10:6.74:27,0,7	1/1:20,13:32:30.07:324,30,0	1/1:11,8:19:3.48:34,3,0	1/1:21,0:21:5.80:46,6,0	0/0:13,0:12:23.86:0,24,218	1/1:3,1:2:2.44:31,2,0
chr10	104247311	.	GGT	G	1396.51	PASS	AB=0.898;AC=16;AF=0.286;AN=56;BaseQRankSum=8.092;DP=787;FS=3.009;HRun=0;HaplotypeScore=105.4396;InbreedingCoeff=0.1307;MQ=66.35;MQ0=14;MQRankSum=0.913;QD=4.06;ReadPosRankSum=1.082;VQSLOD=2.0881;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:46.14:0,46,1105	0/1:12,3:15:39.20:39,0,342	0/1:51,1:21:24.40:24,0,91	0/0:47,0:22:23.77:0,24,254	0/1:20,2:22:21.11:21,0,605	1/1:7,15:23:32.93:360,33,0	1/1:15,13:30:29.75:305,30,0	0/0:26,0:24:26.06:0,26,283	0/0:27,0:27:51.15:0,51,768	0/1:19,2:20:19.97:20,0,453	0/1:15,1:16:1.54:2,0,426	0/0:24,1:25:16.48:0,16,635	0/1:17,4:21:39.20:39,0,334	0/1:27,3:30:47.72:48,0,565	0/0:33,0:33:65.30:0,65,1085	0/0:24,1:25:16.52:0,17,690	0/0:42,0:41:87.12:0,87,1240	0/1:31,4:34:66.45:66,0,778	0/0:22,0:21:25.64:0,26,246	0/0:17,0:16:9.86:0,10,87	0/0:45,0:42:15.45:0,15,125	0/0:28,0:27:57.18:0,57,852	0/1:17,3:20:27.16:27,0,513	0/1:26,4:29:49.76:50,0,638	1/1:8,20:29:50.98:568,51,0	0/0:25,0:25:39.13:0,39,588	0/0:14,0:23:9.26:0,9,87	0/0:16,0:17:12.93:0,13,356
chr10	104249466	.	TAC	T	184.77	PASS	AB=0.905;AC=14;AF=0.259;AN=54;BaseQRankSum=3.066;DP=551;FS=8.330;HRun=0;HaplotypeScore=93.8366;InbreedingCoeff=-0.2835;MQ=68.04;MQ0=16;MQRankSum=1.178;QD=0.70;ReadPosRankSum=2.070;VQSLOD=1.1802;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:22,1:23:3.75:4,0,260	0/1:5,3:8:15.30:15,0,192	0/1:28,0:14:0:0,0,0	./.	0/1:25,1:26:1.54:2,0,485	0/0:21,0:17:11.04:0,11,74	0/0:30,0:31:6.87:0,7,51	0/0:33,0:32:28.28:0,28,236	0/1:7,3:10:48.69:49,0,151	0/1:22,0:21:6.23:6,0,298	0/1:14,1:15:13.62:14,0,286	0/1:16,0:17:0.87:1,0,117	0/0:13,0:13:18.06:0,18,259	0/0:6,0:6:14.92:0,15,194	0/1:21,0:21:14.95:15,0,170	0/0:15,0:15:24.81:0,25,321	0/1:19,3:22:35.18:35,0,272	0/0:27,1:28:17.04:0,17,644	0/0:9,0:9:8.37:0,8,53	0/0:18,0:18:8.99:0,9,78	0/0:30,0:29:3.01:0,3,39	0/1:8,3:12:54.71:55,0,78	0/0:11,0:11:2.29:0,2,79	0/1:17,0:20:65.24:65,0,237	0/0:25,0:25:19.72:0,20,135	0/1:19,0:18:24.37:24,0,277	0/0:11,0:11:8.13:0,8,62	0/1:16,3:19:33.64:34,0,368
chr10	104249560	.	T	TA	798.68	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-2.784;DP=590;FS=2.268;HRun=11;HaplotypeScore=93.2406;InbreedingCoeff=0.8218;MQ=71.85;MQ0=2;MQRankSum=-0.146;QD=15.97;ReadPosRankSum=-1.207;VQSLOD=3.8282;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:35:86.91:0,87,673	0/0:13,0:15:37.87:0,38,283	0/0:21,0:17:2.93:0,3,27	0/0:10,0:10:7.17:0,7,44	0/0:22,0:22:53.76:0,54,418	1/1:4,10:13:24.05:244,24,0	1/1:5,8:13:0.82:190,1,0	0/0:30,0:30:72.46:0,72,550	0/0:22,0:22:44.77:0,45,345	0/0:26,0:26:65.65:0,66,504	0/0:25,0:25:56.24:0,56,426	0/0:17,0:17:38.80:0,39,299	0/0:19,0:19:44.81:0,45,348	0/0:18,1:19:23.33:0,23,363	0/0:16,0:17:41.81:0,42,323	0/0:18,0:18:44.80:0,45,348	0/0:28,0:28:65.70:0,66,510	0/0:14,0:16:37.84:0,38,277	0/0:19,0:19:41.71:0,42,324	0/0:33,0:33:89.01:0,89,677	0/0:18,0:18:35.77:0,36,278	0/0:18,0:18:41.83:0,42,325	0/0:25,0:28:63.77:0,64,469	0/0:17,0:17:35.83:0,36,276	1/1:4,19:23:30.71:494,31,0	0/0:31,0:31:86.63:0,87,668	0/0:19,0:18:50.18:0,50,379	0/0:16,0:16:41.79:0,42,321
chr10	104251669	.	T	TA	967.92	PASS	AB=0.868;AC=8;AF=0.143;AN=56;BaseQRankSum=-5.620;DP=517;FS=1.102;HRun=12;HaplotypeScore=62.3575;InbreedingCoeff=0.3734;MQ=79.17;MQ0=0;MQRankSum=0.069;QD=8.57;ReadPosRankSum=0.536;VQSLOD=2.5037;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:52.17:0,52,412	0/1:4,0:5:10.90:11,0,55	0/0:23,0:17:11.51:0,12,114	0/1:22,0:20:12.16:12,0,103	0/0:18,0:18:15.94:0,16,236	1/1:3,21:25:44.91:423,45,0	1/1:3,9:12:15.02:146,15,0	0/0:24,0:24:56.64:0,57,414	0/0:13,0:14:31.83:0,32,223	0/0:27,0:29:34.68:0,35,372	0/0:16,1:18:6.42:0,6,184	0/0:9,0:11:22.86:0,23,156	0/0:12,0:12:26.34:0,26,184	0/0:19,1:20:18.57:0,19,295	0/0:11,0:11:32.79:0,33,238	0/0:18,1:19:23.53:0,24,323	0/0:12,0:14:27.87:0,28,184	0/0:20,0:22:45.10:0,45,293	0/0:18,0:18:14.42:0,14,249	0/0:20,0:21:37.69:0,38,266	0/0:12,0:12:23.66:0,24,165	0/1:14,1:16:0.45:0,0,141	0/0:23,1:27:45:0,45,386	0/0:14,1:15:12.58:0,13,253	0/1:8,24:32:15.52:512,0,16	0/0:18,0:19:4.67:0,5,165	0/0:11,3:14:0.57:0,1,162	0/0:12,0:15:19.07:0,19,191
chr10	104251948	.	T	TATAC	4942.57	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-3.818;DP=856;FS=0.000;HRun=0;HaplotypeScore=163.3329;InbreedingCoeff=0.8802;MQ=58.45;MQ0=4;MQRankSum=-1.454;QD=22.57;ReadPosRankSum=-2.185;VQSLOD=4.2449;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:79.76:0,80,1208	0/0:15,0:15:21.07:0,21,336	0/0:37,0:23:2.95:0,3,22	0/0:23,0:11:12.04:0,12,191	0/0:32,0:33:63.19:0,63,958	1/1:9,17:26:36.12:865,36,0	1/1:8,16:26:33.11:792,33,0	1/1:29,0:41:32.81:313,33,0	0/0:33,0:33:72.25:0,72,1150	0/0:43,0:42:84.17:0,84,1291	0/0:31,0:31:69.22:0,69,1077	0/0:31,0:31:63.21:0,63,997	0/0:30,0:30:63.21:0,63,997	0/0:27,0:27:51.15:0,51,760	0/0:40,0:40:99:0,99,1552	0/0:29,0:29:66.21:0,66,1033	0/0:28,0:28:47.36:0,47,729	0/0:20,0:21:4.13:0,4,406	1/1:14,0:19:17.83:162,18,0	1/1:15,0:31:2:52,2,0	0/0:20,0:26:6.02:0,6,93	0/0:26,0:26:60.20:0,60,958	0/0:34,0:34:66.21:0,66,1030	0/0:27,0:27:35.85:0,36,576	1/1:11,36:47:96.33:2291,96,0	0/0:26,0:26:54.18:0,54,839	1/1:12,0:28:26.76:468,27,0	0/0:28,0:28:60.20:0,60,953
chr10	104252252	.	G	GCACA	7369.82	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.425;DP=776;FS=7.864;HRun=0;HaplotypeScore=122.3138;InbreedingCoeff=0.9961;MQ=64.04;MQ0=3;MQRankSum=-2.258;QD=42.85;ReadPosRankSum=-0.487;VQSLOD=4.9987;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:45:99:0,126,2111	0/0:12,0:12:33.11:0,33,566	0/0:29,0:21:46.38:0,46,736	0/0:15,0:9:14.91:0,15,219	0/0:25,0:26:63.21:0,63,1058	0/0:17,0:17:36.12:0,36,612	0/0:34,0:34:87.27:0,87,1437	1/1:11,20:32:72.03:1616,72,0	0/0:33,0:34:87.28:0,87,1441	0/0:27,0:27:66.22:0,66,1110	0/0:20,0:20:57.19:0,57,975	0/0:33,0:33:84.29:0,84,1438	0/0:32,0:32:84.27:0,84,1415	0/0:31,0:31:75.24:0,75,1260	0/0:33,0:34:84.28:0,84,1398	0/0:21,0:20:51.17:0,51,872	0/0:28,0:28:78.27:0,78,1339	0/0:17,0:18:54.18:0,54,892	1/1:10,11:24:48.08:958,48,0	1/1:7,21:28:39.13:980,39,0	1/1:20,44:67:99:2828,120,0	0/0:30,0:30:78.27:0,78,1339	0/0:22,0:22:45.14:0,45,746	0/0:31,0:31:72.17:0,72,1144	0/0:25,0:25:54.18:0,54,927	0/0:20,0:20:51.17:0,51,874	1/1:4,13:17:41.93:987,42,0	0/0:20,0:20:57.17:0,57,918
chr10	104252784	.	C	CG	5701.13	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-15.032;DP=740;FS=3.577;HRun=2;HaplotypeScore=74.4539;InbreedingCoeff=0.9996;MQ=87.10;MQ0=0;MQRankSum=-4.705;QD=38.26;ReadPosRankSum=1.405;VQSLOD=5.5361;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,1484	0/0:10,0:10:27.08:0,27,334	0/0:26,0:26:59.49:0,59,850	0/0:23,0:23:69.21:0,69,839	0/0:27,0:27:72.23:0,72,890	0/0:19,0:19:54.17:0,54,669	0/0:29,0:29:87.26:0,87,1065	1/1:5,26:31:81.01:1105,81,0	0/0:37,0:37:99:0,108,1325	0/0:26,0:26:69.17:0,69,816	0/0:12,0:12:30.09:0,30,371	0/0:30,0:30:90.26:0,90,1100	0/0:18,0:18:54.17:0,54,668	0/0:23,0:23:66.21:0,66,818	0/0:25,0:25:72.23:0,72,891	0/0:41,0:41:99:0,114,1413	0/0:36,0:36:99:0,105,1288	0/0:23,0:23:63.20:0,63,779	1/1:0,28:28:81.26:1144,81,0	1/1:1,23:24:63.21:905,63,0	1/1:0,46:46:99:1813,126,0	0/0:20,0:20:60.19:0,60,743	0/0:26,0:26:69.22:0,69,855	0/0:26,0:26:75.14:0,75,882	0/0:19,0:19:45.13:0,45,543	0/0:39,0:39:99:0,108,1324	1/1:2,18:20:51.17:733,51,0	0/0:13,0:13:39.12:0,39,483
chr10	104254251	.	GT	G	2388.44	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=1.669;DP=574;FS=17.212;HRun=1;HaplotypeScore=81.2975;InbreedingCoeff=0.9946;MQ=61.10;MQ0=33;MQRankSum=-1.729;QD=21.52;ReadPosRankSum=-1.603;VQSLOD=2.2388;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:78.25:0,78,1087	0/0:6,0:6:15.52:0,16,219	0/0:29,0:12:30.09:0,30,356	0/0:25,0:16:34.74:0,35,457	0/0:22,0:22:51.16:0,51,683	0/0:17,0:17:45.91:0,46,360	0/0:23,0:22:35.10:0,35,302	1/1:7,27:28:54.94:833,55,0	0/0:20,0:20:46.02:0,46,603	0/0:28,0:27:74.91:0,75,930	0/0:11,0:11:29.82:0,30,366	0/0:18,0:18:50.18:0,50,666	0/0:17,0:15:41.35:0,41,556	0/0:12,0:12:30.08:0,30,408	0/0:21,0:21:39.59:0,40,524	0/0:19,0:16:40.85:0,41,573	0/0:18,0:16:33.58:0,34,464	0/0:13,0:11:29.70:0,30,335	1/1:4,17:16:22.03:457,22,0	1/1:5,9:10:23.91:280,24,0	1/1:5,17:16:33.11:449,33,0	0/0:18,0:17:42.14:0,42,583	0/0:20,0:20:36.09:0,36,481	0/0:36,0:34:81.14:0,81,1119	0/0:23,0:23:52.52:0,53,493	0/0:21,0:20:60.11:0,60,704	1/1:1,18:18:44.99:544,45,0	0/0:12,0:11:32.97:0,33,430
chr10	104256523	.	GTCTCTCTGTCTCTCTC	G	1049.07	PASS	AB=0.783;AC=8;AF=0.143;AN=56;BaseQRankSum=0.863;DP=603;FS=5.089;HRun=0;HaplotypeScore=234.4232;InbreedingCoeff=0.6959;MQ=54.78;MQ0=10;MQRankSum=0.311;QD=8.89;ReadPosRankSum=-2.983;VQSLOD=1.9587;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:62.42:0,62,2137	0/0:12,0:12:32.95:0,33,794	0/0:4,0:3:2.90:0,3,16	0/0:16,0:5:7.79:0,8,68	0/0:24,0:24:51.01:0,51,1383	0/0:25,0:24:43.84:0,44,996	0/0:24,0:24:22.59:0,23,685	0/1:27,0:22:2.54:167,0,3	0/0:16,0:16:36.02:0,36,1335	0/0:27,0:27:65.54:0,66,2155	0/0:14,0:12:21:0,21,929	0/0:20,0:20:42.21:0,42,1306	0/0:18,0:17:41.91:0,42,944	0/0:15,0:15:42.06:0,42,1448	0/0:23,0:22:51.58:0,52,2138	0/0:25,0:25:65.84:0,66,2420	0/0:24,0:23:60.50:0,61,1755	0/0:25,0:25:74.79:0,75,2425	1/1:11,0:7:2.88:91,3,0	0/1:4,13:17:2.79:186,0,3	1/1:44,0:44:20.79:447,21,0	0/0:21,0:21:50.95:0,51,1229	0/0:15,0:15:30:0,30,623	0/0:43,0:43:99:0,118,4818	0/0:33,0:31:51.38:0,51,1268	0/0:20,0:19:45.10:0,45,1345	1/1:2,17:19:9.01:297,9,0	0/0:17,0:16:38.88:0,39,1345
chr10	104256531	.	GTC	G	288.41	PASS	AB=0.952;AC=17;AF=0.315;AN=54;BaseQRankSum=2.860;DP=580;FS=1.484;HRun=0;HaplotypeScore=91.5600;InbreedingCoeff=-0.2962;MQ=53.98;MQ0=11;MQRankSum=0.668;QD=0.84;ReadPosRankSum=0.225;VQSLOD=1.6037;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,2:25:43.46:43,0,247	0/0:13,0:13:15.01:0,15,189	./.	0/0:13,0:4:2.98:0,3,21	0/1:22,0:22:4.61:5,0,377	0/0:24,0:23:8.56:0,9,188	0/1:22,0:22:22.53:23,0,42	0/0:18,0:26:16.23:0,16,149	0/1:14,2:16:31.46:31,0,363	0/1:25,2:27:34.63:35,0,279	0/0:13,0:12:6.02:0,6,90	0/1:15,3:18:40.48:40,0,292	0/1:15,0:15:20.74:21,0,328	0/1:17,0:17:12.29:12,0,366	0/0:14,0:20:26.84:0,27,302	0/0:22,1:23:8.35:0,8,535	0/0:25,2:26:11.35:0,11,574	0/1:23,5:28:50.62:51,0,531	0/0:11,0:7:6.01:0,6,59	0/1:14,0:15:4.52:5,0,73	0/1:34,2:36:12.22:12,0,277	0/1:20,0:20:37.92:38,0,230	0/0:16,0:16:27.07:0,27,371	0/0:42,1:43:41.39:0,41,999	0/1:32,0:30:0.67:1,0,153	0/1:18,0:17:52.09:52,0,87	1/1:17,1:18:8.69:62,9,0	0/1:14,0:13:7.67:8,0,246
chr10	104259498	.	C	CTT	4300.61	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-1.100;DP=603;FS=3.446;HRun=10;HaplotypeScore=78.8578;InbreedingCoeff=0.9975;MQ=64.07;MQ0=1;MQRankSum=-5.235;QD=24.86;ReadPosRankSum=-2.087;VQSLOD=4.4270;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:51:99:0,131,1322	0/0:9,0:9:24.05:0,24,244	0/0:15,0:11:27.05:0,27,270	0/0:9,0:10:20.20:0,20,192	0/0:24,0:24:50.75:0,51,518	1/1:12,8:20:42.88:543,43,0	1/1:4,8:12:33.06:433,33,0	1/1:13,23:34:69.39:879,69,0	0/0:15,0:15:32.80:0,33,316	0/0:26,0:25:60.10:0,60,609	0/0:16,0:16:38.80:0,39,378	0/0:17,0:17:45.05:0,45,458	0/0:17,0:17:42.04:0,42,420	0/0:21,0:21:47.94:0,48,472	0/0:11,0:11:30.06:0,30,305	0/0:21,0:21:51.08:0,51,519	0/0:37,0:37:99:0,102,1026	0/0:35,0:35:86.92:0,87,941	1/1:6,16:26:49.42:565,49,0	1/1:4,8:13:24.04:333,24,0	1/1:4,14:18:27.09:402,27,0	0/0:19,0:19:45.09:0,45,458	0/0:21,0:23:53.51:0,54,529	0/0:33,0:33:93.18:0,93,937	1/1:12,12:25:53.16:655,53,0	0/0:21,0:21:57.07:0,57,566	1/1:5,17:22:33.11:490,33,0	0/0:8,0:8:23.79:0,24,225
chr10	104259516	.	C	CT	921.93	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.294;DP=599;FS=6.834;HRun=7;HaplotypeScore=76.6378;InbreedingCoeff=0.8823;MQ=58.37;MQ0=5;MQRankSum=-8.652;QD=16.17;ReadPosRankSum=-2.319;VQSLOD=3.0884;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,144,1376	0/0:7,0:7:12.01:0,12,110	0/0:11,0:8:3.63:0,4,63	0/0:8,0:8:2.13:0,2,6	0/0:21,0:21:41.21:0,41,397	1/1:6,13:19:30.06:347,30,0	1/1:8,11:18:42.04:463,42,0	0/0:30,0:27:23.54:0,24,374	0/0:16,0:16:30.04:0,30,290	0/0:21,0:20:42.06:0,42,406	0/0:16,0:16:29.17:0,29,286	0/0:20,0:20:47.99:0,48,446	0/0:20,0:20:48.02:0,48,448	0/0:22,0:22:36.03:0,36,342	0/0:13,0:13:27.04:0,27,261	0/0:22,0:22:48.07:0,48,463	0/0:35,0:35:90.14:0,90,868	0/0:39,0:39:96.06:0,96,908	0/0:19,0:17:29.64:0,30,289	0/0:12,0:12:20.92:0,21,187	0/0:16,0:16:35.98:0,36,330	0/0:21,0:21:45.06:0,45,434	0/0:24,0:24:59.68:0,60,578	0/0:38,0:38:99:0,102,984	1/1:10,9:19:21.06:254,21,0	0/0:28,0:28:60.07:0,60,578	0/0:18,0:18:36.05:0,36,346	0/0:12,0:10:21.03:0,21,202
chr10	104260348	.	C	CAGCTAATAAGCT	20939.66	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-4.227;DP=736;FS=0.716;HRun=0;HaplotypeScore=228.7611;InbreedingCoeff=0.9416;MQ=68.58;MQ0=0;MQRankSum=-15.784;QD=101.16;ReadPosRankSum=-4.879;VQSLOD=3.6660;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,150,5151	0/0:9,0:9:27.07:0,27,911	0/0:7,0:8:5.96:0,6,381	0/0:13,0:13:0.40:0,0,183	0/0:30,0:30:87.25:0,87,3017	1/1:8,16:29:69.24:3829,69,0	1/1:14,16:36:81.28:4439,81,0	1/1:14,4:28:63.18:2853,63,0	0/0:27,0:27:75.24:0,75,2675	0/0:32,0:32:87.29:0,87,3041	0/0:21,0:21:54.19:0,54,1914	0/0:36,0:36:99:0,108,3770	0/0:22,0:22:54.14:0,54,1824	0/0:26,0:26:75.26:0,75,2674	0/0:32,0:32:84.29:0,84,2963	0/0:27,0:27:75.26:0,75,2700	0/0:38,0:37:99:0,108,3803	0/0:19,0:19:51.17:0,51,1801	1/1:11,2:19:48.16:2242,48,0	1/1:12,8:33:60.12:2597,60,0	1/1:6,5:17:27.09:1430,27,0	0/0:21,0:21:63.13:0,63,2152	0/0:16,0:16:45.15:0,45,1595	0/0:43,0:43:99:0,120,4166	1/1:6,8:26:33.07:1690,33,0	0/0:35,0:35:99:0,99,3176	1/1:6,8:19:33.11:1859,33,0	0/0:21,0:21:51.15:0,51,1801
chr10	104262572	.	AC	A	6358.03	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=18.390;DP=667;FS=6.079;HRun=2;HaplotypeScore=84.6399;InbreedingCoeff=0.9997;MQ=83.86;MQ0=0;MQRankSum=-0.893;QD=32.61;ReadPosRankSum=-0.191;VQSLOD=4.4548;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,156,2212	0/0:11,0:11:30.10:0,30,449	0/0:19,0:19:51.17:0,51,738	0/0:21,0:21:63.04:0,63,886	0/0:11,0:11:30.10:0,30,448	1/1:2,17:19:45.14:540,45,0	1/1:2,24:26:72.22:864,72,0	1/1:2,28:30:84.24:996,84,0	0/0:31,0:31:90.30:0,90,1348	0/0:27,0:27:78.26:0,78,1144	0/0:16,0:16:45.14:0,45,654	0/0:26,0:26:78.26:0,78,1148	0/0:33,0:33:93.28:0,93,1346	0/0:25,0:25:75.24:0,75,1101	0/0:29,0:29:87.27:0,87,1279	0/0:18,0:18:54.18:0,54,809	0/0:30,0:30:90.24:0,90,1321	0/0:32,0:32:90.30:0,90,1339	1/1:1,14:15:42.13:504,42,0	1/1:1,11:12:33.10:396,33,0	1/1:2,55:57:99:1908,159,0	0/0:21,0:21:60.20:0,60,894	0/0:13,0:13:36.12:0,36,539	0/0:18,0:18:54.18:0,54,809	1/1:2,11:13:30.08:358,30,0	0/0:22,0:22:66.22:0,66,986	1/1:0,23:23:66.20:792,66,0	0/0:16,0:16:45.15:0,45,674
chr10	104263210	.	A	AC	5091.88	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.214;DP=551;FS=0.740;HRun=1;HaplotypeScore=73.3354;InbreedingCoeff=0.9825;MQ=91.37;MQ0=0;MQRankSum=-6.866;QD=30.67;ReadPosRankSum=-0.496;VQSLOD=4.3669;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.27:0,90,1152	0/0:2,0:2:6.02:0,6,78	0/0:25,0:26:53.45:0,53,753	0/0:21,0:21:56.99:0,57,660	0/0:15,0:15:45.15:0,45,584	1/1:2,23:25:72.20:902,72,0	1/1:5,19:24:57.64:695,58,0	1/1:8,18:26:54.18:612,54,0	0/0:15,0:15:45.15:0,45,584	0/0:13,0:13:36.12:0,36,467	0/0:12,0:12:36.12:0,36,467	0/0:18,0:18:51.14:0,51,637	0/0:20,0:20:60.20:0,60,779	0/0:15,0:15:45.11:0,45,542	0/0:17,0:17:51.17:0,51,662	0/0:16,0:16:48.16:0,48,623	0/0:21,0:21:60.16:0,60,750	0/0:28,0:28:81.24:0,81,1035	1/1:2,12:14:36.11:455,36,0	1/1:0,20:20:60.16:732,60,0	1/1:1,18:19:45.60:539,46,0	0/0:19,0:19:51.15:0,51,647	0/0:23,0:23:66.08:0,66,815	0/0:33,0:33:93.29:0,93,1191	1/1:4,13:17:42.11:513,42,0	0/0:27,0:27:78.25:0,78,1013	1/1:1,20:19:53.93:644,54,0	0/0:14,0:14:36.12:0,36,467
chr10	104263213	.	A	AC	5258.09	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.839;DP=556;FS=1.997;HRun=1;HaplotypeScore=75.9147;InbreedingCoeff=0.9825;MQ=91.57;MQ0=0;MQRankSum=-6.666;QD=31.11;ReadPosRankSum=-1.775;VQSLOD=4.1605;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.20:0,87,1094	0/0:2,0:2:6.02:0,6,78	0/0:25,0:25:72.10:0,72,826	0/0:23,0:23:35.65:0,36,645	0/0:15,0:15:45.13:0,45,570	1/1:4,20:24:72:805,72,0	1/1:7,19:26:69.07:795,69,0	1/1:11,16:27:75.21:893,75,0	0/0:15,0:15:42.14:0,42,545	0/0:13,0:13:39.10:0,39,472	0/0:12,0:12:36.04:0,36,435	0/0:18,0:18:51.14:0,51,635	0/0:21,0:21:63.19:0,63,803	0/0:15,0:15:42.14:0,42,545	0/0:18,0:18:51.16:0,51,650	0/0:17,0:17:51.16:0,51,651	0/0:22,0:22:66.19:0,66,829	0/0:27,0:27:81.23:0,81,1033	1/1:4,9:13:36.07:407,36,0	1/1:2,19:21:63.01:677,63,0	1/1:2,18:20:48.14:575,48,0	0/0:18,0:18:51.07:0,51,609	0/0:22,0:22:60.20:0,60,779	0/0:31,0:31:93.30:0,93,1206	1/1:4,12:16:42.59:531,43,0	0/0:29,0:29:81.22:0,81,1012	1/1:7,15:20:56.11:574,56,0	0/0:14,0:14:42.14:0,42,542
chr10	104263620	.	C	CT	6392.79	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-12.330;DP=534;FS=19.788;HRun=0;HaplotypeScore=64.5262;InbreedingCoeff=0.9934;MQ=82.65;MQ0=1;MQRankSum=-0.773;QD=32.95;ReadPosRankSum=2.207;VQSLOD=3.3609;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:95.98:0,96,1075	0/0:5,0:5:14.99:0,15,153	0/0:16,0:15:38.91:0,39,413	0/0:24,0:23:42.34:0,42,515	0/0:12,0:12:33.07:0,33,438	1/1:1,20:21:51.16:711,51,0	1/1:0,28:28:66.22:916,66,0	1/1:0,30:30:84.18:1049,84,0	0/0:22,0:22:60.13:0,60,720	0/0:17,0:16:45.09:0,45,577	0/0:8,0:8:15.04:0,15,192	0/0:13,0:13:36.09:0,36,458	0/0:17,0:17:48.08:0,48,596	0/0:9,0:9:24.06:0,24,302	0/0:14,0:14:42.08:0,42,533	0/0:22,0:22:60.15:0,60,804	0/0:23,0:23:69.14:0,69,860	0/0:24,0:24:69.16:0,69,906	1/1:2,28:30:87.04:1117,87,0	1/1:3,14:17:39.06:520,39,0	1/1:2,32:33:72.24:1005,72,0	0/0:15,0:15:39.06:0,39,486	0/0:10,0:10:21.03:0,21,242	0/0:24,0:24:69.02:0,69,792	1/1:1,14:15:33.11:454,33,0	0/0:16,0:16:45.12:0,45,562	1/1:0,19:19:44.74:621,45,0	0/0:12,0:12:33.90:0,34,356
chr10	104265588	.	C	CA	1792.06	PASS	AB=0.808;AC=10;AF=0.179;AN=56;BaseQRankSum=-4.648;DP=587;FS=6.623;HRun=11;HaplotypeScore=73.5870;InbreedingCoeff=0.7359;MQ=71.75;MQ0=0;MQRankSum=-0.415;QD=15.45;ReadPosRankSum=-3.997;VQSLOD=2.8436;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:56.84:0,57,579	0/1:8,0:8:0.18:0,0,138	0/0:16,1:17:15.91:0,16,186	0/0:11,0:10:13.60:0,14,95	0/0:14,0:15:31.91:0,32,238	0/0:19,1:21:22.39:0,22,347	0/0:21,0:21:47.76:0,48,371	1/1:8,18:27:56.58:538,57,0	0/0:23,0:24:49.75:0,50,377	0/0:21,0:22:43.86:0,44,331	0/0:19,0:19:50.68:0,51,387	0/0:20,1:22:28.20:0,28,390	0/0:14,0:14:38.81:0,39,296	0/0:20,2:22:23.34:0,23,362	0/0:19,0:20:46.83:0,47,354	0/0:14,0:14:14.29:0,14,254	0/0:24,2:27:9.85:0,10,430	0/0:24,0:25:52.74:0,53,397	0/1:6,9:16:13.57:225,0,14	1/1:7,16:26:43.33:369,43,0	1/1:2,12:14:30.06:305,30,0	0/0:23,1:24:4.68:0,5,349	0/0:21,4:26:3.94:0,4,384	0/0:27,0:28:67.77:0,68,516	0/0:21,0:21:50.73:0,51,393	0/0:27,0:26:53.74:0,54,418	1/1:1,24:25:51.10:517,51,0	0/0:13,0:15:33.93:0,34,243
chr10	104266954	.	AGTACACT	A	4705.37	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=11.723;DP=660;FS=1.607;HRun=0;HaplotypeScore=153.1558;InbreedingCoeff=0.9868;MQ=67.16;MQ0=18;MQRankSum=-13.096;QD=31.37;ReadPosRankSum=-6.010;VQSLOD=3.4057;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:74.45:0,74,2853	0/0:9,0:9:27.09:0,27,1052	0/0:54,0:18:45.15:0,45,1517	0/0:68,0:30:75.93:0,76,2644	0/0:12,0:12:36.12:0,36,1381	1/1:4,16:20:45.15:774,45,0	1/1:6,21:27:35.25:722,35,0	1/1:6,15:21:45.11:1045,45,0	0/0:20,0:20:57.20:0,57,2105	0/0:25,0:25:69.24:0,69,2622	0/0:12,0:11:27.09:0,27,1002	0/0:20,0:20:57.20:0,57,2107	0/0:30,0:30:84.29:0,84,3171	0/0:22,0:22:63.69:0,64,2377	0/0:30,0:30:90.31:0,90,3449	0/0:20,0:20:51.17:0,51,1939	0/0:42,0:42:99:0,105,3847	0/0:19,0:19:54.19:0,54,2038	1/1:3,7:10:27.09:641,27,0	1/1:3,14:16:9.44:166,9,0	1/1:8,15:22:14.42:245,14,0	0/0:17,0:17:51.18:0,51,1924	0/0:23,0:23:66.23:0,66,2475	0/0:39,0:39:99:0,108,4095	1/1:2,16:18:30.05:616,30,0	0/0:17,0:17:45.15:0,45,1667	1/1:1,12:14:24.04:497,24,0	./.
chr10	104266955	.	GTA	G	194.81	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=10.108;DP=658;FS=6.488;HRun=0;HaplotypeScore=121.2848;InbreedingCoeff=0.5261;MQ=68.82;MQ0=17;MQRankSum=-9.330;QD=1.56;ReadPosRankSum=-0.249;VQSLOD=1.9248;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:75.26:0,75,1522	0/0:9,0:9:27.09:0,27,548	0/0:55,0:19:50.85:0,51,889	0/0:69,0:31:81.76:0,82,1551	0/0:12,0:12:36.12:0,36,708	1/1:17,3:20:2.63:57,3,0	0/1:27,0:27:6.49:30,0,6	0/1:19,0:19:59.10:59,0,183	0/0:21,0:21:63.20:0,63,1152	0/0:25,0:25:72.24:0,72,1381	0/0:12,0:11:10.11:0,10,527	0/0:20,0:20:60.21:0,60,1156	0/0:31,0:31:87.30:0,87,1710	0/0:22,0:22:63.15:0,63,1238	0/0:31,0:31:93.32:0,93,1846	0/0:19,0:19:54.17:0,54,1060	0/0:42,0:42:99:0,108,2147	0/0:19,0:19:54.19:0,54,1080	0/1:10,0:10:44.50:57,0,45	1/1:17,0:16:2.35:9,2,0	0/0:21,0:21:7.78:0,8,42	0/0:17,0:17:51.18:0,51,1033	0/0:24,0:24:69.22:0,69,1351	0/0:38,0:38:99:0,108,2171	1/1:17,1:18:5.89:24,6,0	0/0:17,0:17:51.16:0,51,958	1/1:14,0:14:18.14:105,18,0	./.
chr10	104266958	.	CACTGT	C	1319.02	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=12.989;DP=657;FS=9.005;HRun=0;HaplotypeScore=147.5375;InbreedingCoeff=0.8376;MQ=73.61;MQ0=16;MQRankSum=-12.327;QD=9.16;ReadPosRankSum=-5.202;VQSLOD=0.0652;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:77.47:0,77,2446	0/0:9,0:9:27.09:0,27,857	0/0:56,1:21:56.52:0,57,1499	0/0:73,0:36:96.94:0,97,2792	0/0:12,0:12:36.12:0,36,1127	1/1:17,3:20:19.23:159,19,0	1/1:27,0:27:27.69:220,28,0	0/1:18,0:18:3.59:390,0,4	0/0:20,0:20:60.21:0,60,1878	0/0:26,0:26:75.26:0,75,2355	0/0:11,0:10:27.09:0,27,834	0/0:20,0:20:57.20:0,57,1758	0/0:30,0:30:87.30:0,87,2693	0/0:22,0:22:66.23:0,66,2062	0/0:31,0:31:93.32:0,93,2929	0/0:18,0:18:51.18:0,51,1614	0/0:41,0:40:99:0,111,3294	0/0:19,0:19:54.19:0,54,1705	1/1:10,0:10:8.85:263,9,0	1/1:16,0:15:1.13:42,1,0	1/1:21,0:21:12.47:62,12,0	0/0:17,0:17:51.18:0,51,1591	0/0:23,0:23:69.24:0,69,2136	0/0:38,0:38:99:0,108,3363	1/1:17,1:18:28.62:197,29,0	0/0:17,0:17:51.18:0,51,1583	1/1:14,0:14:1.97:166,2,0	./.
chr10	104267307	.	GGGGA	G	574.92	PASS	AB=0.750;AC=9;AF=0.180;AN=50;BaseQRankSum=4.926;DP=172;FS=7.739;HRun=0;HaplotypeScore=34.4361;InbreedingCoeff=0.4898;MQ=46.80;MQ0=48;MQRankSum=-6.313;QD=19.82;ReadPosRankSum=-0.351;VQSLOD=1.3882;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:28.26:0,28,825	./.	./.	0/0:34,0:4:4.90:0,5,49	0/0:2,0:2:6.02:0,6,174	0/0:3,0:3:3.01:0,3,59	0/0:4,0:4:12.04:0,12,319	1/1:1,6:7:21.06:247,21,0	0/0:2,0:2:6.02:0,6,173	0/0:5,0:3:9.03:0,9,255	0/0:5,0:5:15.04:0,15,365	0/0:1,0:1:3.01:0,3,84	0/0:6,0:3:9.03:0,9,259	0/0:5,0:4:9.03:0,9,254	0/0:5,0:3:9.03:0,9,259	0/0:4,0:1:3.01:0,3,87	0/0:3,0:3:9.03:0,9,254	0/0:4,0:3:9.03:0,9,261	1/1:0,2:2:6.02:78,6,0	1/1:2,5:7:14.60:149,15,0	0/1:4,2:6:25.67:66,0,26	0/0:4,0:2:6.01:0,6,112	0/0:2,0:2:4.26:0,4,89	0/0:10,0:9:26.58:0,27,604	0/0:3,0:3:0.68:0,1,159	0/0:3,0:3:9.03:0,9,259	1/1:1,6:6:17.82:179,18,0	./.
chr10	104269296	.	GGAGACAGA	G	3602.56	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.664;DP=494;FS=2.664;HRun=0;HaplotypeScore=129.5948;InbreedingCoeff=0.9823;MQ=75.76;MQ0=0;MQRankSum=-9.810;QD=44.48;ReadPosRankSum=-2.316;VQSLOD=3.0948;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.30:0,87,3713	0/0:7,0:7:18.06:0,18,698	0/0:13,0:13:30.08:0,30,919	0/0:17,0:17:39.12:0,39,1370	0/0:10,0:10:24.08:0,24,1062	0/0:16,0:16:45.15:0,45,1963	0/0:29,0:29:84.29:0,84,3634	1/1:4,16:20:48.13:1289,48,0	0/0:21,0:21:57.18:0,57,2396	0/0:9,0:9:21.07:0,21,815	0/0:6,0:6:14.89:0,15,598	0/0:21,0:21:57.20:0,57,2509	0/0:17,0:17:48.15:0,48,1976	0/0:21,0:21:54.17:0,54,2186	0/0:23,0:23:63.22:0,63,2704	0/0:17,0:17:45.15:0,45,1993	0/0:39,0:39:99:0,108,4581	0/0:42,0:41:99:0,117,4907	1/1:3,11:14:33.11:927,33,0	1/1:2,5:7:18.06:360,18,0	1/1:4,26:30:19.58:432,20,0	0/0:11,0:11:24.08:0,24,827	0/0:6,0:6:18.06:0,18,711	0/0:29,0:29:81.26:0,81,3259	0/0:6,0:6:15.05:0,15,661	0/0:10,0:10:27.09:0,27,1085	1/1:0,10:10:21.07:594,21,0	0/0:11,0:11:33.11:0,33,1460
chr10	104269565	.	C	CTT	1571.84	PASS	AB=0.875;AC=10;AF=0.179;AN=56;BaseQRankSum=-1.331;DP=517;FS=19.743;HRun=13;HaplotypeScore=81.5742;InbreedingCoeff=0.6948;MQ=68.82;MQ0=6;MQRankSum=-1.009;QD=13.55;ReadPosRankSum=-3.726;VQSLOD=-0.1108;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:68.10:0,68,550	0/0:5,0:6:8.69:0,9,61	0/1:22,0:13:2.34:2,0,45	0/0:16,0:9:10.16:0,10,60	0/0:21,0:23:13.99:0,14,285	0/0:27,0:26:42.71:0,43,456	0/0:27,0:27:59.80:0,60,508	1/1:13,19:31:59.62:689,60,0	0/0:15,0:17:31.47:0,31,234	0/0:15,0:15:22.83:0,23,186	0/0:19,0:19:9.39:0,9,250	0/0:19,0:19:22.62:0,23,283	0/0:16,0:16:0.42:0,0,156	0/0:10,0:10:19.41:0,19,128	0/0:7,0:8:8.73:0,9,112	0/0:16,0:16:19.97:0,20,194	0/0:31,0:32:34.92:0,35,503	0/0:22,0:24:58.92:0,59,468	1/1:8,1:14:20.77:205,21,0	1/1:7,9:16:23.97:264,24,0	0/1:10,5:15:19.30:269,0,19	0/0:10,0:11:20.70:0,21,169	0/0:7,0:8:20.41:0,20,157	0/0:20,0:20:50.61:0,51,420	0/0:14,0:13:29.95:0,30,259	0/0:22,0:24:45.69:0,46,399	1/1:12,2:17:39.21:306,39,0	0/0:13,0:12:29.34:0,29,244
chr10	104270719	.	T	TA	4083.67	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-3.898;DP=470;FS=31.615;HRun=9;HaplotypeScore=51.7407;InbreedingCoeff=0.9597;MQ=59.72;MQ0=6;MQRankSum=0.979;QD=24.60;ReadPosRankSum=0.672;VQSLOD=1.9622;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:53.97:0,54,465	0/0:10,0:11:32.03:0,32,266	0/0:7,0:4:8.90:0,9,78	0/0:5,0:1:2.37:0,2,8	0/0:23,0:22:53.93:0,54,467	1/1:3,12:15:36.10:398,36,0	1/1:1,10:11:24.03:253,24,0	1/1:9,20:24:57.12:611,57,0	0/0:17,0:17:44.99:0,45,391	0/0:24,0:24:68.97:0,69,595	0/0:24,0:24:59.93:0,60,511	0/0:15,0:15:35.99:0,36,312	0/0:8,0:8:20.99:0,21,182	0/0:15,0:15:38.96:0,39,334	0/0:10,0:10:26.99:0,27,234	0/0:9,0:9:23.97:0,24,205	0/0:18,0:18:44.98:0,45,391	0/0:23,0:23:56.98:0,57,495	1/1:10,22:26:69.15:745,69,0	1/1:4,16:20:48.13:531,48,0	1/1:2,12:13:30.08:332,30,0	0/0:11,0:11:29.99:0,30,258	0/0:16,0:15:35.97:0,36,312	0/0:11,0:11:32.95:0,33,279	1/1:2,24:26:69.15:750,69,0	0/0:23,0:23:56.95:0,57,490	1/1:2,17:19:42.11:464,42,0	0/0:14,0:14:41.99:0,42,364
chr10	104271506	.	GGT	G	4664.65	PASS	AB=0.992;AC=40;AF=0.714;AN=56;BaseQRankSum=10.193;DP=604;FS=3.171;HRun=0;HaplotypeScore=205.9805;InbreedingCoeff=-0.4146;MQ=76.64;MQ0=3;MQRankSum=0.469;QD=7.72;ReadPosRankSum=12.083;VQSLOD=3.0874;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:48,0:48:7.77:374,8,0	0/1:9,0:9:24.62:56,0,25	0/1:19,0:22:60.63:61,0,91	0/1:16,0:16:8.50:88,0,8	0/1:21,0:21:32:119,0,32	1/1:27,0:27:6.41:197,6,0	0/1:34,0:33:11.38:257,0,11	0/1:23,0:23:99:122,0,115	1/1:14,0:14:22.25:164,22,0	0/1:20,0:20:18.21:166,0,18	0/1:11,0:11:23.73:65,0,24	1/1:22,0:22:51.75:270,52,0	1/1:21,0:21:10.16:203,10,0	0/1:22,0:22:25.91:176,0,26	1/1:28,0:27:61.38:345,61,0	1/1:28,0:28:17.63:245,18,0	1/1:25,0:25:21.57:248,22,0	0/1:29,0:28:0.49:236,0,0	1/1:18,0:18:8.32:157,8,0	1/1:16,1:16:20.25:108,20,0	0/1:27,0:27:13.43:145,0,13	0/1:20,0:20:64.50:90,0,65	1/1:19,1:20:0.21:112,0,0	0/1:13,0:12:27.06:100,0,27	0/1:20,0:19:24.16:156,0,24	0/1:20,1:20:13.50:165,0,13	0/1:22,2:24:52.58:191,0,53	1/1:4,0:4:8.59:51,9,0
chr10	104272344	.	AGG	A	1417.30	PASS	AB=0.958;AC=25;AF=0.463;AN=54;BaseQRankSum=2.206;DP=345;FS=5.226;HRun=3;HaplotypeScore=58.6332;InbreedingCoeff=0.1146;MQ=47.83;MQ0=32;MQRankSum=-0.067;QD=6.11;ReadPosRankSum=0.121;VQSLOD=-0.1869;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:22,1:20:25.53:26,0,270	1/1:2,0:1:3.01:36,3,0	1/1:1,0:1:2.22:7,2,0	./.	0/0:8,0:5:5.74:0,6,38	1/1:16,0:16:25.99:232,26,0	0/1:18,0:13:42.12:93,0,42	1/1:11,14:22:39.46:311,39,0	0/0:13,0:13:19.79:0,20,287	0/0:7,0:5:6.46:0,6,51	0/0:7,0:6:2.98:0,3,21	0/0:17,0:17:3.59:0,4,204	0/0:13,0:11:23.59:0,24,238	0/1:11,0:10:7.41:7,0,45	0/0:18,0:17:25.87:0,26,381	0/1:13,0:12:60.38:60,0,75	0/1:21,0:19:76.29:182,0,76	0/1:3,0:3:2.97:3,0,53	1/1:6,10:15:29.02:193,29,0	1/1:8,0:7:11.98:99,12,0	0/1:23,0:13:2.55:85,0,3	0/0:12,0:10:11.99:0,12,102	0/0:12,0:10:7.09:0,7,53	0/1:15,0:13:73.97:74,0,176	0/1:3,8:10:4.93:19,0,5	0/1:10,0:7:29.01:29,0,42	1/1:7,0:7:14.91:116,15,0	0/1:9,0:9:16.54:17,0,33
chr10	104274530	.	CTTTT	C	2572.35	PASS	AB=0.958;AC=12;AF=0.214;AN=56;BaseQRankSum=0.853;DP=542;FS=7.156;HRun=7;HaplotypeScore=84.8559;InbreedingCoeff=0.3968;MQ=51.32;MQ0=24;MQRankSum=0.524;QD=13.98;ReadPosRankSum=-1.804;VQSLOD=-0.7112;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:27:61.53:0,62,1038	0/0:14,0:14:32.94:0,33,565	0/0:54,0:7:12.61:0,13,148	0/1:46,0:10:15.07:15,0,226	0/0:26,0:25:43.91:0,44,740	1/1:8,3:10:29.93:447,30,0	1/1:11,0:11:15.20:236,15,0	0/1:16,8:24:99:233,0,145	0/0:20,0:20:44.80:0,45,619	0/0:25,0:21:56.16:0,56,792	0/0:26,0:26:60.51:0,61,974	0/0:16,0:15:45.11:0,45,870	0/0:8,0:7:17.87:0,18,273	0/0:15,0:15:38.06:0,38,638	0/0:9,0:8:24.01:0,24,441	0/0:13,0:13:35.15:0,35,562	0/0:21,0:21:40.87:0,41,859	0/0:17,0:17:39.03:0,39,664	0/1:20,0:19:10.64:334,0,11	0/1:21,0:20:79.41:177,0,79	0/1:9,0:9:3.57:169,0,4	0/0:4,0:3:6.02:0,6,116	0/0:13,0:13:31.95:0,32,487	0/0:10,0:10:30.06:0,30,627	1/1:17,5:21:57.19:875,57,0	0/0:21,0:20:48.48:0,48,673	0/1:19,0:19:87.48:255,0,87	0/0:15,0:14:38.94:0,39,609
chr10	104274533	.	T	TC	1275.86	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=7.237;DP=549;FS=0.000;HRun=0;HaplotypeScore=79.6978;InbreedingCoeff=0.5407;MQ=50.35;MQ0=27;MQRankSum=0.894;QD=9.38;ReadPosRankSum=-0.786;VQSLOD=3.4571;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:26:64.58:0,65,774	0/0:13,0:13:32.09:0,32,373	0/0:55,0:6:16.88:0,17,144	0/0:47,0:10:14.08:0,14,189	0/0:26,0:25:41.92:0,42,569	1/1:11,0:10:18.48:141,18,0	1/1:9,0:9:5.35:106,5,0	0/1:21,0:21:66.61:116,0,67	0/0:17,0:17:47.70:0,48,503	0/0:27,0:23:57.04:0,57,705	0/0:25,0:25:63:0,63,742	0/0:16,0:15:45.14:0,45,607	0/0:8,0:7:18.03:0,18,204	0/0:17,0:17:31:0,31,407	0/0:9,0:8:23.28:0,23,273	0/0:15,0:15:38.71:0,39,469	0/0:24,0:23:54.63:0,55,633	0/0:18,0:18:42:0,42,528	1/1:7,16:21:32.99:377,33,0	0/1:20,0:19:22.92:153,0,23	0/1:11,0:11:7.89:71,0,8	0/0:5,0:4:5.91:0,6,83	0/0:13,0:13:32.97:0,33,379	0/0:13,0:13:30.06:0,30,389	1/1:21,0:20:43.27:291,43,0	0/0:22,0:21:47:0,47,595	0/1:20,0:20:33.41:192,0,33	0/0:14,0:13:39.07:0,39,474
chr10	104274537	.	TC	T	2118.19	PASS	AB=0.998;AC=26;AF=0.464;AN=56;BaseQRankSum=9.342;DP=530;FS=120.597;HRun=1;HaplotypeScore=60.3008;InbreedingCoeff=0.2754;MQ=49.34;MQ0=28;MQRankSum=-6.123;QD=6.09;ReadPosRankSum=-4.888;VQSLOD=0.1439;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:26:3.39:3,0,341	0/1:12,0:12:34.94:35,0,143	0/0:51,0:5:4.76:0,5,45	0/1:45,1:9:4.44:4,0,59	0/0:17,9:25:37.25:0,37,282	1/1:11,0:10:24.10:202,24,0	1/1:8,0:8:10.42:125,10,0	1/1:21,0:21:38.86:262,39,0	0/1:16,0:16:38.04:38,0,153	0/0:24,1:21:24.12:0,24,251	0/1:21,0:21:28.11:28,0,223	0/0:15,0:14:41.83:0,42,342	0/0:7,0:6:4.89:0,5,66	0/1:17,0:17:39.87:40,0,153	0/0:10,0:8:9.83:0,10,121	0/1:16,0:16:3.41:3,0,164	0/1:25,0:24:30.43:30,0,245	0/0:19,0:19:1.34:0,1,222	1/1:21,0:19:52.93:354,53,0	1/1:21,0:20:47.14:310,47,0	1/1:11,0:11:23.38:150,23,0	0/0:5,0:4:8.12:0,8,50	0/0:13,0:13:15.22:0,15,169	0/1:12,0:12:3.79:4,0,163	1/1:22,0:21:56.19:417,56,0	0/1:23,0:22:37.70:38,0,215	1/1:16,0:16:39.71:262,40,0	0/0:11,0:10:22.75:0,23,205
chr10	104274872	.	TA	T	973.10	PASS	AB=0.777;AC=17;AF=0.304;AN=56;BaseQRankSum=2.212;DP=575;FS=1.929;HRun=15;HaplotypeScore=70.2194;InbreedingCoeff=-0.0395;MQ=74.92;MQ0=2;MQRankSum=0.138;QD=3.13;ReadPosRankSum=3.286;VQSLOD=-0.1197;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:41,3:44:31.72:32,0,480	0/0:10,2:13:8.36:0,8,198	0/0:30,1:22:4.55:0,5,127	0/0:14,1:7:1.29:0,1,26	0/0:22,0:25:30.58:0,31,273	0/1:7,11:17:20.15:140,0,20	1/1:3,10:13:20.63:135,21,0	0/1:14,12:30:14.13:145,0,14	0/0:17,1:18:0.39:0,0,230	0/0:13,1:14:1.73:0,2,139	0/0:20,0:21:28.80:0,29,239	0/0:20,0:20:20.88:0,21,209	0/1:11,3:15:8.77:9,0,141	0/0:16,0:16:34.68:0,35,284	0/0:19,0:19:11.54:0,12,206	0/0:13,0:13:2.17:0,2,174	0/1:37,4:43:54.83:55,0,486	0/0:20,4:26:1.83:0,2,354	0/1:14,10:25:3.96:220,0,4	0/1:17,10:26:92.24:106,0,92	0/1:7,6:14:29.97:79,0,30	0/1:13,3:16:4.53:5,0,180	0/0:14,1:16:12.57:0,13,221	0/1:17,8:26:66.31:66,0,186	1/1:3,11:14:17.41:104,17,0	0/0:16,0:16:18.28:0,18,246	1/1:4,7:11:1.03:30,1,0	0/1:13,2:15:1.30:1,0,107
chr10	104275312	.	TATACC	T	1023.51	PASS	AB=0.916;AC=6;AF=0.120;AN=50;BaseQRankSum=4.463;DP=875;FS=1.739;HRun=0;HaplotypeScore=157.0567;InbreedingCoeff=0.6201;MQ=75.74;MQ0=27;MQRankSum=0.555;QD=9.84;ReadPosRankSum=3.386;VQSLOD=2.8421;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:51.14:0,51,1300	0/0:18,0:17:33.10:0,33,853	./.	./.	0/1:27,1:28:19.77:20,0,652	0/0:29,0:29:45.15:0,45,1199	0/0:29,0:29:39.12:0,39,966	./.	0/0:38,0:38:66.21:0,66,1737	0/0:31,0:29:33.11:0,33,794	0/0:26,0:26:24.08:0,24,625	0/0:35,0:35:60.21:0,60,1569	0/0:24,0:24:45.15:0,45,1151	0/0:35,0:35:54.19:0,54,1403	0/0:22,0:37:27.09:0,27,603	0/0:24,0:24:42.14:0,42,1088	0/0:26,0:26:51.17:0,51,1320	0/0:27,0:27:36.12:0,36,982	0/0:32,0:26:30.10:0,30,820	0/0:25,0:25:33.11:0,33,857	0/0:59,0:59:72.25:0,72,1916	0/0:20,0:20:27.07:0,27,605	1/1:18,13:31:24.08:422,24,0	1/1:16,16:32:36.12:633,36,0	0/0:28,0:27:51.16:0,51,1283	0/0:31,0:30:45.15:0,45,1146	0/0:25,0:25:33.11:0,33,896	0/1:11,2:13:81.40:81,0,473
chr10	104276040	.	CGGG	C	816.13	PASS	AC=10;AF=0.200;AN=50;BaseQRankSum=-0.708;DP=235;FS=29.575;HRun=16;HaplotypeScore=40.5628;InbreedingCoeff=0.4687;MQ=79.91;MQ0=2;MQRankSum=0.928;QD=11.03;ReadPosRankSum=5.740;VQSLOD=-0.5331;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:6.43:0,6,46	0/0:2,0:2:3.01:0,3,38	0/0:17,0:10:6.70:0,7,110	0/0:11,0:7:6:0,6,57	1/1:8,0:8:0.45:1,0,0	1/1:3,10:13:20.95:226,21,0	1/1:9,18:27:41.26:449,41,0	0/0:11,0:11:0:0,0,0	0/0:4,0:4:3.90:0,4,43	0/0:1,0:1:0:0,0,0	./.	0/0:9,0:9:14.81:0,15,114	0/0:4,0:4:6.02:0,6,85	0/0:3,0:3:3.01:0,3,39	0/0:2,0:2:0:0,0,0	0/0:2,0:2:3.01:0,3,39	0/0:18,0:17:7.56:0,8,57	0/0:18,0:18:16.36:0,16,144	0/0:5,0:7:0:0,0,0	0/0:4,0:4:0:0,0,0	1/1:13,0:13:2.01:7,2,0	0/0:3,0:3:3.01:0,3,36	0/0:5,0:5:2.96:0,3,19	0/0:6,0:6:3:0,3,27	1/1:2,11:13:24.03:258,24,0	./.	0/0:17,0:17:2.88:0,3,15	./.
chr10	104276183	.	AC	A	1998.75	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.849;DP=516;FS=4.829;HRun=5;HaplotypeScore=52.8121;InbreedingCoeff=0.9179;MQ=96.34;MQ0=0;MQRankSum=-2.633;QD=28.15;ReadPosRankSum=-0.355;VQSLOD=3.5962;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,1423	0/0:5,0:5:9.03:0,9,123	0/0:27,0:27:64.87:0,65,809	0/0:24,0:24:66.12:0,66,827	0/0:13,0:13:39.13:0,39,531	1/1:0,18:18:45.13:510,45,0	1/1:0,29:29:78.22:884,78,0	0/0:37,0:37:96.29:0,96,1270	0/0:12,0:12:36.11:0,36,476	0/0:15,0:15:39.12:0,39,520	0/0:14,0:14:42.05:0,42,548	0/0:17,0:17:48.16:0,48,656	0/0:15,0:15:39.10:0,39,500	0/0:14,0:14:39.13:0,39,529	0/0:12,0:12:33.11:0,33,451	0/0:4,0:4:9.03:0,9,123	0/0:33,0:33:96.31:0,96,1290	0/0:20,0:20:60.20:0,60,819	0/0:19,0:19:57.11:0,57,721	0/0:24,0:24:72.24:0,72,974	0/0:30,0:30:90.28:0,90,1208	0/0:7,0:7:18.06:0,18,246	0/0:5,0:5:15.05:0,15,205	0/0:23,0:23:66.22:0,66,902	1/1:0,24:24:66.19:747,66,0	0/0:14,0:14:36.10:0,36,463	0/0:20,0:20:57.19:0,57,778	0/0:2,0:2:6.02:0,6,82
chr10	104276548	.	AAAAG	A	954.79	PASS	AB=0.931;AC=12;AF=0.214;AN=56;BaseQRankSum=5.457;DP=502;FS=1.748;HRun=0;HaplotypeScore=84.7312;InbreedingCoeff=0.4348;MQ=57.24;MQ0=8;MQRankSum=-1.205;QD=6.32;ReadPosRankSum=-3.823;VQSLOD=0.9706;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:88.90:0,89,1762	0/0:12,0:12:33.06:0,33,657	0/1:13,0:4:1.45:1,0,60	0/0:13,0:7:17.77:0,18,261	0/0:15,0:15:25.63:0,26,471	0/1:6,8:13:0.33:143,0,0	1/1:16,0:15:18.09:194,18,0	0/1:22,0:22:29.75:84,0,30	0/0:14,0:14:32.91:0,33,502	0/0:25,0:25:63.12:0,63,1204	0/0:20,0:20:42.91:0,43,693	0/0:15,0:15:39.11:0,39,703	0/0:20,0:20:54.07:0,54,893	0/0:18,0:17:50.92:0,51,773	0/0:8,0:8:20.45:0,20,327	0/0:13,0:13:38.94:0,39,517	0/0:34,0:34:88.79:0,89,1538	0/0:21,0:21:48.46:0,48,925	0/1:19,1:18:27.80:224,0,28	0/1:16,0:16:35.78:45,0,36	1/1:11,0:11:7.96:96,8,0	0/0:8,0:8:21:0,21,274	0/0:16,0:16:42.04:0,42,734	0/0:31,0:31:84.09:0,84,1594	1/1:21,0:20:21.38:186,21,0	0/0:22,0:22:52.71:0,53,861	0/1:18,0:18:23.01:141,0,23	0/0:7,0:6:14.99:0,15,231
chr10	104276549	.	AAAG	A	1836.82	PASS	AB=0.938;AC=16;AF=0.286;AN=56;BaseQRankSum=5.376;DP=500;FS=1.423;HRun=0;HaplotypeScore=72.5517;InbreedingCoeff=0.8739;MQ=57.39;MQ0=8;MQRankSum=-3.688;QD=12.08;ReadPosRankSum=-4.434;VQSLOD=2.2927;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:68.52:0,69,1407	0/0:12,0:12:33.04:0,33,543	0/1:13,0:4:1.57:2,0,50	0/0:13,0:7:16.48:0,16,213	0/0:15,0:15:27.35:0,27,399	0/1:12,2:13:3.90:160,0,4	1/1:8,8:15:28.32:338,28,0	1/1:22,1:23:30.56:307,31,0	0/0:16,0:16:38.24:0,38,450	0/0:24,0:24:63.03:0,63,968	0/0:18,0:18:28.29:0,28,564	0/0:15,0:15:39.10:0,39,592	0/0:20,0:20:54.02:0,54,738	0/0:18,0:17:49.83:0,50,657	0/0:8,0:8:20.09:0,20,282	0/0:13,0:13:38.42:0,38,421	0/0:33,0:33:89.52:0,90,1310	0/0:20,0:20:50.18:0,50,767	1/1:20,0:18:23.29:325,23,0	1/1:16,0:16:13.70:135,14,0	1/1:10,1:11:20.51:178,21,0	0/0:8,0:8:20.97:0,21,236	0/0:16,0:16:41.99:0,42,607	0/0:31,0:31:83.98:0,84,1288	1/1:3,18:20:23.95:256,24,0	0/0:22,0:22:51.33:0,51,723	1/1:15,3:18:40.92:332,41,0	0/0:7,0:6:14.97:0,15,195
chr10	104276550	.	AAG	A	2085.72	PASS	AB=0.938;AC=16;AF=0.286;AN=56;BaseQRankSum=5.034;DP=503;FS=0.000;HRun=0;HaplotypeScore=63.4036;InbreedingCoeff=0.8433;MQ=57.55;MQ0=8;MQRankSum=-4.318;QD=13.54;ReadPosRankSum=-3.518;VQSLOD=2.6458;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:61.52:0,62,1069	0/0:13,0:13:36.01:0,36,456	0/1:13,0:4:1.66:2,0,44	0/0:13,0:7:16.74:0,17,177	0/0:14,0:14:18.78:0,19,303	0/1:12,2:13:7.30:137,0,7	1/1:16,0:15:29.75:225,30,0	1/1:20,4:24:56.77:521,57,0	0/0:16,0:16:30.49:0,30,341	0/0:23,0:23:62.66:0,63,751	0/0:18,0:18:28.01:0,28,442	0/0:17,0:17:44.90:0,45,512	0/0:20,0:20:52.60:0,53,569	0/0:18,0:17:41.23:0,41,500	0/0:8,0:8:4.27:0,4,219	0/0:13,0:13:31.65:0,32,309	0/0:34,0:34:91.90:0,92,1079	0/0:20,0:20:38.68:0,39,587	1/1:18,2:18:38.21:400,38,0	1/1:16,0:16:28:188,28,0	1/1:12,0:12:24.83:203,25,0	0/0:8,0:8:20.77:0,21,200	0/0:16,0:16:41.90:0,42,479	0/0:31,0:31:83.90:0,84,1012	1/1:20,1:20:23.88:185,24,0	0/0:21,0:21:49.32:0,49,560	1/1:18,0:18:50.72:425,51,0	0/0:7,0:6:14.94:0,15,160
chr10	104276551	.	AG	A	1984.33	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=4.749;DP=491;FS=1.301;HRun=1;HaplotypeScore=53.6941;InbreedingCoeff=0.8274;MQ=58.34;MQ0=8;MQRankSum=-5.768;QD=12.33;ReadPosRankSum=-4.314;VQSLOD=0.5361;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,1:39:22.63:0,23,729	0/0:12,0:12:35.98:0,36,354	0/1:13,0:4:1.76:2,0,38	0/0:13,0:7:5.73:0,6,128	0/0:13,0:13:30.79:0,31,284	1/1:13,0:12:2.97:102,3,0	1/1:13,1:13:29.17:195,29,0	1/1:20,2:22:59.53:466,60,0	0/0:15,0:15:32.77:0,33,266	0/0:23,0:23:57.93:0,58,564	0/0:17,0:17:28.95:0,29,372	0/0:17,0:17:38.80:0,39,377	0/0:21,0:21:55.30:0,55,474	0/0:17,1:17:48.12:0,48,390	0/0:8,0:8:4.07:0,4,172	0/1:13,0:13:1.45:1,0,194	0/0:34,0:34:74.46:0,74,785	0/0:21,0:21:49.35:0,49,464	1/1:18,1:17:48.13:377,48,0	1/1:1,15:16:29.68:202,30,0	1/1:10,1:11:26.46:223,26,0	0/0:7,0:7:19.54:0,20,166	0/0:16,0:16:41.56:0,42,371	0/0:31,0:31:86.46:0,86,778	1/1:20,0:19:23.74:160,24,0	0/0:19,0:19:46:0,46,415	1/1:19,1:20:55.38:453,55,0	0/0:6,0:5:14.99:0,15,137
chr10	104276903	.	A	AT	1066.05	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-5.382;DP=543;FS=0.577;HRun=10;HaplotypeScore=57.6739;InbreedingCoeff=0.8860;MQ=77.07;MQ0=0;MQRankSum=0.155;QD=20.11;ReadPosRankSum=0.029;VQSLOD=4.3692;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:86.85:0,87,710	0/0:10,0:10:29.97:0,30,246	0/0:20,0:20:10.38:0,10,175	0/0:17,0:17:21.20:0,21,141	0/0:21,2:20:15.94:0,16,337	1/1:4,14:19:38.93:398,39,0	1/1:4,14:19:20.34:406,20,0	0/0:23,0:23:50.91:0,51,416	0/0:14,0:14:41.33:0,41,328	0/0:29,0:28:59.84:0,60,485	0/0:18,0:17:37.98:0,38,301	0/0:10,0:10:23.97:0,24,197	0/0:21,1:22:30.93:0,31,461	0/0:12,0:12:23.94:0,24,197	0/0:15,0:16:43.99:0,44,351	0/0:14,0:14:41.95:0,42,345	0/0:27,0:28:79.94:0,80,646	0/0:11,1:12:0.90:0,1,201	0/0:28,0:29:61.94:0,62,498	0/0:20,0:20:44.90:0,45,369	0/0:23,0:23:56.85:0,57,458	0/0:13,0:13:35.90:0,36,287	0/0:20,1:18:16.09:0,16,337	0/0:27,0:28:70.82:0,71,556	1/1:1,14:15:39.06:403,39,0	0/0:23,0:24:64.92:0,65,521	0/0:25,0:25:59.83:0,60,477	0/0:5,0:4:11.99:0,12,99
chr10	104277589	.	C	CTT	3684.96	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.918;DP=772;FS=7.107;HRun=3;HaplotypeScore=90.9275;InbreedingCoeff=0.9991;MQ=82.96;MQ0=0;MQRankSum=0.817;QD=44.40;ReadPosRankSum=0.433;VQSLOD=2.5726;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,111,1532	0/0:11,0:11:30.10:0,30,420	0/0:30,0:30:72.18:0,72,951	0/0:22,0:22:55.73:0,56,760	0/0:24,0:24:69.23:0,69,965	1/1:4,19:23:48.16:880,48,0	1/1:3,37:42:99:1925,105,0	0/0:36,0:36:99:0,105,1421	0/0:36,0:36:99:0,102,1427	0/0:42,0:42:99:0,117,1637	0/0:15,0:15:45.15:0,45,629	0/0:22,0:21:63.21:0,63,881	0/0:28,0:27:78.24:0,78,1067	0/0:28,0:27:72.22:0,72,982	0/0:23,0:21:63.21:0,63,881	0/0:22,0:22:63.20:0,63,864	0/0:46,0:46:99:0,129,1786	0/0:28,0:28:72.18:0,72,968	0/0:23,0:23:63.21:0,63,882	0/0:23,0:23:66.22:0,66,919	0/0:48,0:48:99:0,138,1906	0/0:19,0:19:54.18:0,54,746	0/0:22,0:22:57.19:0,57,797	0/0:39,0:39:99:0,108,1507	1/1:0,18:18:48.16:880,48,0	0/0:31,0:30:90.29:0,90,1245	0/0:19,0:16:42.14:0,42,583	0/0:8,0:8:24.08:0,24,336
chr10	104278651	.	GCA	G	304.82	PASS	AB=0.900;AC=22;AF=0.440;AN=50;BaseQRankSum=4.382;DP=441;FS=2.856;HRun=0;HaplotypeScore=55.0752;InbreedingCoeff=-0.0644;MQ=53.04;MQ0=21;MQRankSum=1.278;QD=1.18;ReadPosRankSum=1.007;VQSLOD=1.2315;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,2:27:5.42:5,0,232	0/1:4,2:6:8.97:26,0,9	./.	./.	0/0:10,0:10:5.98:0,6,64	0/1:24,0:23:26.77:27,0,153	0/0:12,0:12:8.88:0,9,84	0/0:16,0:16:0:0,0,0	0/1:12,0:12:7.48:7,0,122	0/1:11,1:12:19.94:20,0,55	1/1:9,0:9:5.99:49,6,0	0/1:8,5:13:60.72:61,0,114	0/1:8,0:8:11.25:11,0,100	0/0:15,0:15:9.18:0,9,137	0/0:8,0:8:3.01:0,3,44	0/1:9,4:13:17.27:17,0,159	0/1:13,1:13:20.36:20,0,97	0/1:11,2:13:17.31:17,0,140	1/1:13,0:10:7.59:39,8,0	./.	1/1:23,0:22:5.75:31,6,0	0/0:12,0:12:12.01:0,12,137	0/0:10,0:10:14.98:0,15,175	0/0:25,4:29:6.75:0,7,427	1/1:20,0:18:8.63:46,9,0	0/1:12,1:13:17.29:17,0,127	1/1:15,0:14:11.46:59,11,0	0/1:22,0:22:3.91:4,0,77
chr10	104278695	.	ACACC	A	1427.93	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.138;DP=472;FS=3.412;HRun=0;HaplotypeScore=73.6018;InbreedingCoeff=0.6743;MQ=73.40;MQ0=10;MQRankSum=0.626;QD=9.33;ReadPosRankSum=-0.585;VQSLOD=1.9912;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:69.49:0,69,933	0/0:7,0:7:18.01:0,18,191	0/0:18,0:12:35.58:0,36,288	0/0:26,0:19:46.68:0,47,459	0/0:12,0:12:30.04:0,30,377	0/1:29,0:28:9.36:9,0,166	0/1:10,0:10:98.68:99,0,99	1/1:24,0:23:54.53:491,55,0	0/0:13,0:13:39.07:0,39,571	0/0:20,0:18:47.17:0,47,403	0/1:8,0:8:10.80:11,0,87	0/0:20,0:20:28.45:0,28,559	0/0:17,0:17:22.03:0,22,506	0/0:18,0:18:45.50:0,46,667	0/0:8,0:8:18.02:0,18,217	0/0:20,0:19:42.32:0,42,605	0/0:20,0:20:51.65:0,52,580	0/0:14,0:14:39.02:0,39,524	1/1:0,14:14:41.76:371,42,0	1/1:5,0:5:11.98:98,12,0	1/1:3,24:27:6.02:119,6,0	0/0:10,0:10:3.10:0,3,367	0/0:13,0:13:36.04:0,36,522	0/0:27,0:27:72.11:0,72,1273	1/1:1,15:16:14.06:209,14,0	0/0:17,0:17:48.07:0,48,634	1/1:2,18:20:11.86:206,12,0	0/0:8,0:8:24.02:0,24,313
chr10	104279592	.	TAC	T	479.66	PASS	AB=0.952;AC=23;AF=0.523;AN=44;BaseQRankSum=4.426;DP=559;FS=0.000;HRun=0;HaplotypeScore=72.5845;InbreedingCoeff=-0.0407;MQ=67.17;MQ0=12;MQRankSum=0.565;QD=1.39;ReadPosRankSum=2.016;VQSLOD=1.3644;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:43,1:41:43.60:44,0,134	0/1:11,0:11:11.68:12,0,60	./.	./.	1/1:14,0:14:3:29,3,0	1/1:14,0:18:5.42:28,5,0	0/1:23,0:21:0:0,0,0	./.	1/1:20,1:21:5.52:63,6,0	0/0:22,0:22:11.71:0,12,130	0/1:6,0:6:8.10:8,0,19	0/1:9,4:14:22.32:95,0,22	0/0:19,0:19:12:0,12,127	0/0:17,0:16:3.01:0,3,36	0/0:24,0:24:9.03:0,9,131	0/1:18,3:21:19.87:20,0,108	0/1:27,3:30:68.12:68,0,207	1/1:14,2:16:14.19:132,14,0	./.	./.	0/1:33,0:31:0:0,0,0	0/1:20,0:19:22.80:23,0,79	0/0:11,0:12:3.01:0,3,44	0/1:37,1:37:13.90:14,0,131	1/1:7,0:12:8.44:39,8,0	0/1:15,0:15:16.99:17,0,79	1/1:7,0:9:5.59:26,6,0	./.
chr10	104280197	.	CCG	C	1373.10	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=15.098;DP=797;FS=16.146;HRun=0;HaplotypeScore=127.5046;InbreedingCoeff=0.8831;MQ=85.16;MQ0=0;MQRankSum=-5.043;QD=9.74;ReadPosRankSum=1.318;VQSLOD=2.3250;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,126,2362	0/0:9,0:9:24.07:0,24,427	0/0:37,0:37:94.57:0,95,1885	0/0:38,0:37:99:0,101,1762	0/0:22,0:22:66.23:0,66,1258	0/0:24,0:24:72.25:0,72,1375	0/0:32,0:32:93.28:0,93,1710	1/1:21,3:24:28.40:265,28,0	0/0:38,0:38:99:0,114,2144	0/0:27,0:27:78.27:0,78,1504	0/0:18,0:18:54.17:0,54,1003	0/0:29,0:29:84.29:0,84,1620	0/0:22,0:22:66.23:0,66,1252	0/0:42,0:42:99:0,120,2298	0/0:35,0:35:99:0,102,1891	0/0:28,0:28:84.24:0,84,1582	0/0:35,0:35:99:0,105,1856	0/0:27,0:27:81.28:0,81,1563	1/1:18,3:21:30.78:289,31,0	1/1:21,0:21:25.02:208,25,0	1/1:51,0:51:99:615,104,0	0/0:32,0:32:96.33:0,96,1818	0/0:16,0:16:48.16:0,48,904	0/0:31,0:31:93.32:0,93,1775	0/0:18,0:18:51.17:0,51,984	0/0:36,0:35:99:0,105,1971	0/1:24,0:24:8.75:161,0,9	0/0:14,0:14:36.12:0,36,680
chr10	104281467	.	TACACACACAC	T	1721.80	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.774;DP=643;FS=0.000;HRun=0;HaplotypeScore=172.9827;InbreedingCoeff=0.9162;MQ=60.68;MQ0=12;MQRankSum=-7.423;QD=23.27;ReadPosRankSum=2.868;VQSLOD=2.6678;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:57.20:0,57,2495	0/0:5,0:5:15.03:0,15,554	0/0:43,0:18:18.06:0,18,601	0/0:55,0:20:24.03:0,24,911	0/0:22,0:24:51.18:0,51,2337	1/1:11,21:34:33.11:967,33,0	1/1:8,13:22:6.02:161,6,0	0/0:23,0:20:39.13:0,39,1364	0/0:22,0:25:60.21:0,60,2671	0/0:24,0:24:51.12:0,51,1906	0/0:17,0:17:44.16:0,44,2102	0/0:20,0:21:54.19:0,54,2461	0/0:16,0:17:39.13:0,39,1773	0/0:21,0:21:45.15:0,45,2036	0/0:15,0:18:39.13:0,39,1735	0/0:20,0:21:51.18:0,51,2330	0/0:35,0:38:90.31:0,90,3656	0/0:15,0:16:43.39:0,43,1703	0/0:13,0:13:21.07:0,21,662	0/0:23,0:21:9.03:0,9,309	0/0:15,0:15:11.84:0,12,498	0/0:21,0:21:51.16:0,51,2406	0/0:16,0:16:36.12:0,36,1642	0/0:30,0:30:75.26:0,75,3501	1/1:4,14:18:24.08:728,24,0	0/0:21,0:21:39.13:0,39,1774	0/0:8,0:17:18.06:0,18,701	0/0:9,0:11:30.10:0,30,1191
chr10	104281637	.	T	TA	5237.19	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=15.530;DP=635;FS=3.359;HRun=1;HaplotypeScore=83.2874;InbreedingCoeff=0.9994;MQ=99.14;MQ0=0;MQRankSum=-2.981;QD=42.93;ReadPosRankSum=-1.839;VQSLOD=4.4062;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1511	0/0:8,0:8:24.08:0,24,330	0/0:39,0:39:99:0,111,1453	0/0:29,0:29:84.21:0,84,1107	0/0:16,0:16:48.15:0,48,649	0/0:23,0:23:66.21:0,66,905	0/0:31,0:31:87.28:0,87,1201	1/1:1,16:17:48.16:745,48,0	0/0:29,0:29:87.29:0,87,1215	0/0:26,0:26:78.26:0,78,1091	0/0:23,0:22:69.20:0,69,928	0/0:20,0:20:60.20:0,60,837	0/0:15,0:15:45.13:0,45,608	0/0:18,0:18:51.17:0,51,713	0/0:17,0:17:48.16:0,48,671	0/0:18,0:18:54.18:0,54,753	0/0:28,0:28:84.26:0,84,1155	0/0:32,0:32:96.32:0,96,1342	1/1:3,15:18:45.09:667,45,0	1/1:0,15:15:42.14:664,42,0	1/1:1,56:57:99:2587,162,0	0/0:15,0:15:42.11:0,42,543	0/0:15,0:15:45.14:0,45,612	0/0:24,0:24:72.24:0,72,1007	0/0:21,0:21:54.18:0,54,753	0/0:12,0:12:36.11:0,36,487	1/1:1,14:15:36.12:575,36,0	0/0:17,0:17:45.15:0,45,629
chr10	104284512	.	G	GAC	1181.50	PASS	AB=0.726;AC=15;AF=0.268;AN=56;BaseQRankSum=-1.543;DP=448;FS=2.196;HRun=0;HaplotypeScore=66.0414;InbreedingCoeff=0.4306;MQ=66.22;MQ0=8;MQRankSum=-0.444;QD=8.88;ReadPosRankSum=-0.753;VQSLOD=3.0784;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:62.21:0,62,697	0/0:5,0:5:12.03:0,12,140	0/0:48,0:25:4.39:0,4,18	0/0:55,0:33:22.46:0,22,230	0/0:5,0:7:17.72:0,18,168	0/1:3,7:9:10.91:305,0,11	0/1:5,8:13:7.91:349,0,8	1/1:14,0:12:14.58:144,15,0	0/0:13,0:15:35.77:0,36,378	0/0:13,0:13:30.09:0,30,350	0/0:3,0:5:11.70:0,12,98	0/0:12,0:12:30.08:0,30,339	0/0:11,0:11:4.16:0,4,257	0/0:10,0:10:30.08:0,30,339	0/0:15,0:15:39.11:0,39,455	0/0:11,0:13:23.73:0,24,238	0/1:16,2:18:7.85:8,0,366	0/0:16,0:16:39.11:0,39,454	1/1:10,0:15:17.64:130,18,0	1/1:1,0:5:2.01:16,2,0	1/1:10,1:20:2.97:26,3,0	0/0:7,0:9:20.73:0,21,203	0/0:9,0:9:21.06:0,21,245	0/0:26,0:26:57.17:0,57,664	0/1:4,8:11:10.91:303,0,11	0/0:10,0:12:23.74:0,24,238	1/1:5,0:12:5.99:52,6,0	0/1:11,1:12:14.05:14,0,296
chr10	104285568	.	G	GATT	2290.01	PASS	AB=0.851;AC=20;AF=0.476;AN=42;BaseQRankSum=-0.432;DP=298;FS=1.768;HRun=0;HaplotypeScore=49.6610;InbreedingCoeff=0.5505;MQ=71.75;MQ0=0;MQRankSum=-1.563;QD=12.45;ReadPosRankSum=0.133;VQSLOD=3.0650;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:18.06:0,18,236	0/1:2,1:3:33.30:51,0,33	./.	./.	./.	1/1:18,0:18:15.05:181,15,0	1/1:11,0:11:3.01:40,3,0	1/1:33,0:33:18.03:230,18,0	0/0:14,0:14:6.02:0,6,79	0/0:7,0:8:15.01:0,15,178	0/0:6,0:6:9.03:0,9,117	0/0:6,0:6:3.01:0,3,39	1/1:8,0:8:6.02:93,6,0	0/0:5,0:5:3.01:0,3,39	0/0:6,0:6:6.02:0,6,79	./.	1/1:16,13:29:33.11:631,33,0	1/1:8,15:23:42.09:765,42,0	1/1:15,0:15:6.02:78,6,0	./.	./.	./.	0/0:1,0:2:2.98:0,3,21	0/0:8,0:11:5.95:0,6,42	1/1:15,0:15:23.90:236,24,0	0/0:4,0:8:11.42:0,11,72	1/1:7,0:9:9.03:117,9,0	0/1:19,1:20:27.25:27,0,308
chr10	104285598	.	T	TATC	1195.20	PASS	AB=0.945;AC=8;AF=0.148;AN=54;BaseQRankSum=6.579;DP=233;FS=1.276;HRun=0;HaplotypeScore=40.9037;InbreedingCoeff=-0.1542;MQ=60.17;MQ0=3;MQRankSum=-1.843;QD=12.20;ReadPosRankSum=4.819;VQSLOD=2.5633;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:36.02:0,36,451	0/1:6,0:6:12.35:12,0,135	0/0:4,0:4:12.02:0,12,118	0/0:3,0:3:0:0,0,0	0/0:5,0:5:12:0,12,104	0/1:10,5:15:64.27:283,0,64	0/1:6,0:6:13.03:46,0,13	0/0:31,0:30:77.78:0,78,658	0/0:6,0:6:18.01:0,18,203	0/0:8,0:8:21.06:0,21,291	0/0:5,0:5:15.02:0,15,203	0/0:1,0:1:3.01:0,3,51	0/1:3,0:3:19.79:20,0,36	0/0:3,0:3:9:0,9,99	0/0:5,0:5:14.99:0,15,175	0/0:3,0:3:9:0,9,81	0/1:24,0:24:99:281,0,208	0/1:21,0:21:67.81:360,0,68	0/0:10,0:8:20.92:0,21,170	0/0:2,0:2:3:0,3,25	0/0:2,0:2:6:0,6,52	./.	0/0:2,0:2:6.01:0,6,56	0/0:6,0:6:15:0,15,135	0/1:13,4:17:99:297,0,114	0/0:5,0:5:15.02:0,15,144	0/1:6,0:6:25.76:26,0,73	0/0:21,0:21:24.69:0,25,641
chr10	104285604	.	T	TATC	1481.50	PASS	AB=0.962;AC=9;AF=0.167;AN=54;BaseQRankSum=7.455;DP=251;FS=4.446;HRun=0;HaplotypeScore=40.5108;InbreedingCoeff=0.0493;MQ=60.85;MQ0=3;MQRankSum=0.865;QD=14.52;ReadPosRankSum=4.304;VQSLOD=2.7325;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:33.03:0,33,428	0/1:6,0:6:12.35:12,0,135	0/0:6,0:6:15.04:0,15,164	0/0:2,0:2:3.01:0,3,36	0/0:6,0:6:17.98:0,18,154	0/1:9,5:14:14.66:360,0,15	0/1:6,0:6:5.85:104,0,6	0/0:31,0:30:77.79:0,78,664	0/0:8,0:8:18:0,18,199	0/0:10,0:10:30.07:0,30,377	0/0:7,0:7:21.03:0,21,257	0/0:2,0:2:5.99:0,6,72	0/1:3,0:3:19.79:20,0,36	0/0:4,0:4:9:0,9,101	0/0:5,0:5:15:0,15,176	0/0:4,0:4:12.01:0,12,109	0/1:25,0:25:99:282,0,201	0/1:22,0:22:38.84:369,0,39	0/0:9,0:7:20.90:0,21,167	0/0:5,0:5:14.89:0,15,118	0/0:4,0:4:8.99:0,9,77	./.	0/0:2,0:2:6.01:0,6,56	0/0:7,0:7:15.01:0,15,137	1/1:15,4:19:13.35:453,13,0	0/0:6,0:6:18.02:0,18,169	0/1:7,0:7:22.62:23,0,99	0/0:18,0:18:20.65:0,21,616
chr10	104287558	.	CTG	C	2026.80	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.396;DP=1022;FS=2.261;HRun=0;HaplotypeScore=138.2608;InbreedingCoeff=0.9994;MQ=68.30;MQ0=6;MQRankSum=-0.199;QD=24.13;ReadPosRankSum=1.869;VQSLOD=4.6149;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:71,0:71:99:0,187,3054	0/0:9,0:9:27.08:0,27,429	0/0:53,0:35:64.23:0,64,1100	0/0:70,0:43:51.59:0,52,1236	0/0:28,0:28:63.22:0,63,1066	1/1:3,23:26:60.19:774,60,0	1/1:4,29:33:63.20:815,63,0	0/0:49,0:48:99:0,132,2088	0/0:45,0:45:99:0,123,2040	0/0:31,0:30:75.15:0,75,1187	0/0:31,0:31:81.26:0,81,1337	0/0:32,0:32:87.30:0,87,1462	0/0:34,0:34:81.20:0,81,1263	0/0:28,0:28:78.25:0,78,1284	0/0:35,0:35:93.27:0,93,1486	0/0:31,0:31:84.24:0,84,1345	0/0:38,0:38:90.29:0,90,1502	0/0:28,0:28:61.16:0,61,947	0/0:30,0:30:69.04:0,69,1014	0/0:38,0:38:99:0,105,1682	0/0:56,1:57:99:0,121,2576	0/0:35,0:35:90.27:0,90,1475	0/0:32,0:32:84.23:0,84,1330	0/0:58,0:58:99:0,162,2571	1/1:4,21:24:45.15:581,45,0	0/0:39,0:39:99:0,105,1746	0/0:25,0:25:60.18:0,60,978	0/0:11,0:11:30.10:0,30,489
chr10	104288517	.	C	CATGT	5424.73	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-12.095;DP=682;FS=15.985;HRun=0;HaplotypeScore=110.7587;InbreedingCoeff=0.9285;MQ=62.71;MQ0=2;MQRankSum=-1.964;QD=37.67;ReadPosRankSum=-1.225;VQSLOD=4.0268;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:51.17:0,51,842	0/0:7,0:7:12.04:0,12,199	0/0:30,0:27:54.17:0,54,825	0/0:21,0:17:24.07:0,24,348	0/0:28,0:29:72.22:0,72,1146	0/0:22,0:22:57.15:0,57,906	0/0:17,0:17:39.13:0,39,646	1/1:22,14:39:60.19:1363,60,0	0/0:25,0:25:48.15:0,48,753	0/0:29,0:29:66.23:0,66,1095	0/0:28,0:29:66.22:0,66,1072	0/0:24,0:25:63.21:0,63,1023	0/0:25,0:25:60.15:0,60,918	0/0:23,0:23:54.18:0,54,893	0/0:29,0:29:75.24:0,75,1218	0/0:17,0:17:48.15:0,48,771	0/0:27,0:27:69.24:0,69,1129	0/0:21,0:21:33.23:0,33,628	1/1:10,8:19:30.10:711,30,0	1/1:11,24:36:10.46:1349,10,0	1/1:5,21:28:1.43:1131,1,0	0/0:29,0:29:66.21:0,66,1069	0/0:28,0:28:51.17:0,51,834	0/0:20,0:20:39.12:0,39,621	0/0:19,0:19:54.18:0,54,895	0/0:27,0:28:57.18:0,57,897	1/1:8,11:22:36.12:871,36,0	0/0:15,0:15:30.10:0,30,494
chr10	104289664	.	T	TA	2926.05	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=0.673;DP=523;FS=18.523;HRun=7;HaplotypeScore=62.5876;InbreedingCoeff=0.9921;MQ=78.49;MQ0=0;MQRankSum=-1.956;QD=28.97;ReadPosRankSum=-2.533;VQSLOD=1.5284;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.11:0,66,637	0/0:11,0:11:33.01:0,33,305	0/0:24,0:22:54.05:0,54,509	0/0:16,0:16:38.08:0,38,349	0/0:26,0:26:72.10:0,72,690	0/0:22,0:22:54.07:0,54,521	0/0:8,0:8:24.04:0,24,232	1/1:3,27:29:75.23:905,75,0	0/0:19,0:19:48.07:0,48,463	0/0:18,0:18:48.08:0,48,463	0/0:22,0:22:66.08:0,66,626	0/0:7,0:7:15.02:0,15,145	0/0:14,0:14:39.06:0,39,377	0/0:17,0:17:48.07:0,48,463	0/0:26,0:26:75.12:0,75,724	0/0:17,0:17:42.07:0,42,406	0/0:17,0:17:45.07:0,45,434	0/0:16,0:16:48.05:0,48,455	1/1:3,16:19:45.14:543,45,0	1/1:2,14:16:16.16:478,16,0	1/1:0,10:10:24.03:269,24,0	0/0:16,0:16:39.06:0,39,376	0/0:14,0:14:33.04:0,33,319	0/0:13,0:13:30.05:0,30,290	0/0:27,0:27:78.12:0,78,753	0/0:18,0:18:48.06:0,48,459	1/1:0,26:25:75.23:905,75,0	0/0:30,0:30:87.14:0,87,839
chr10	104291701	.	T	TGC	422.14	PASS	AB=0.927;AC=9;AF=0.161;AN=56;BaseQRankSum=2.516;DP=482;FS=13.167;HRun=0;HaplotypeScore=81.9945;InbreedingCoeff=0.3183;MQ=59.84;MQ0=3;MQRankSum=-3.830;QD=2.97;ReadPosRankSum=-2.581;VQSLOD=0.3076;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,1355	0/0:9,0:9:24.05:0,24,323	0/1:26,0:19:20.39:20,0,476	0/0:25,0:20:48.66:0,49,623	0/0:7,0:7:18.01:0,18,210	0/0:10,0:10:5.94:0,6,48	0/1:20,0:20:9.15:105,0,9	0/1:16,0:15:59.42:59,0,143	0/0:13,0:13:33.08:0,33,459	0/0:20,0:20:57.04:0,57,699	0/0:5,0:5:12.04:0,12,181	0/0:20,0:20:49.07:0,49,585	0/0:13,0:13:33:0,33,409	0/0:11,0:11:32.96:0,33,447	0/0:11,0:11:27.07:0,27,388	0/0:7,0:7:20.91:0,21,248	0/0:36,0:36:69.47:0,69,1262	0/0:34,0:33:79.74:0,80,1090	0/1:6,8:14:76.69:112,0,77	0/0:4,0:4:0:0,0,0	1/1:47,0:42:29.03:217,29,0	0/0:17,0:17:42.01:0,42,605	0/0:5,0:5:15.04:0,15,206	0/0:31,0:31:90.06:0,90,1232	1/1:11,0:11:5.94:42,6,0	0/0:15,0:15:45.12:0,45,605	0/1:8,0:8:10.11:10,0,41	0/0:10,0:10:29.94:0,30,394
chr10	104292624	.	G	GCA	2698.37	PASS	AB=0.710;AC=7;AF=0.125;AN=56;BaseQRankSum=-4.891;DP=659;FS=9.611;HRun=0;HaplotypeScore=85.3262;InbreedingCoeff=0.3373;MQ=69.50;MQ0=12;MQRankSum=-0.633;QD=16.35;ReadPosRankSum=-1.332;VQSLOD=2.6145;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:72.03:0,72,811	0/0:7,0:7:18.05:0,18,210	0/0:49,0:17:9.64:0,10,134	0/0:37,0:21:14.91:0,15,153	0/0:10,0:10:26.91:0,27,294	0/0:20,0:23:47.64:0,48,499	0/0:39,0:42:74.55:0,75,794	0/1:14,12:27:4.19:531,0,4	0/0:15,0:17:19.76:0,20,392	0/0:19,0:20:26.12:0,26,356	0/0:10,0:10:18.05:0,18,211	0/0:11,0:11:18.05:0,18,206	0/0:20,0:20:45.13:0,45,526	0/0:16,0:16:42.08:0,42,467	0/1:22,2:27:23.68:24,0,630	0/0:20,0:22:59.82:0,60,649	0/0:34,0:37:33.56:0,34,803	0/0:28,0:28:47.32:0,47,652	0/1:10,7:19:1.56:387,0,2	0/1:3,9:13:16.16:391,0,16	0/1:29,30:63:99:1033,0,121	0/0:12,0:13:35.94:0,36,397	0/0:13,0:13:14.57:0,15,174	0/0:38,0:38:89.53:0,90,980	0/0:17,0:17:33.10:0,33,387	0/0:18,0:19:35.94:0,36,400	1/1:4,11:16:30.99:468,31,0	0/0:12,0:12:36.11:0,36,422
chr10	104292885	.	T	TA	2562.91	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=-7.740;DP=356;FS=0.000;HRun=10;HaplotypeScore=43.9662;InbreedingCoeff=0.8819;MQ=72.26;MQ0=0;MQRankSum=0.510;QD=23.51;ReadPosRankSum=-3.260;VQSLOD=2.9343;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:49.92:0,50,393	0/0:8,0:8:17.96:0,18,148	0/0:8,0:8:11.89:0,12,84	0/0:12,0:11:11.95:0,12,96	0/0:16,0:16:7.06:0,7,264	0/0:17,0:17:26.94:0,27,219	1/1:2,5:7:15.04:159,15,0	1/1:5,19:24:35.51:583,36,0	0/0:5,0:5:11.99:0,12,99	0/0:13,0:13:35.95:0,36,294	0/0:8,0:8:23.97:0,24,197	0/0:8,0:8:20.98:0,21,172	0/0:5,0:5:14.98:0,15,123	0/0:11,0:11:17.95:0,18,148	0/0:10,0:10:23.97:0,24,197	0/0:8,0:8:23.96:0,24,194	0/0:22,0:22:53.89:0,54,438	0/0:16,1:17:10.44:0,10,309	1/1:7,24:31:50.54:743,51,0	1/1:1,11:12:30.04:309,30,0	./.	0/0:12,1:13:4.24:0,4,239	0/0:11,0:12:2.77:0,3,173	0/0:7,0:7:20.96:0,21,168	1/1:2,19:21:51.12:537,51,0	0/0:11,0:11:29.96:0,30,246	1/1:0,14:14:39.10:415,39,0	0/0:13,0:13:35.96:0,36,296
chr10	104292910	.	GTACT	G	538.30	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.730;DP=307;FS=0.000;HRun=0;HaplotypeScore=56.1809;InbreedingCoeff=0.6317;MQ=73.53;MQ0=0;MQRankSum=0.128;QD=15.38;ReadPosRankSum=2.014;VQSLOD=2.9246;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:36.12:0,36,632	0/0:7,0:7:12.04:0,12,216	0/0:11,0:11:5.54:0,6,214	0/0:6,0:6:12.04:0,12,228	0/0:10,0:10:24.07:0,24,413	1/1:3,10:13:3.01:50,3,0	1/1:2,0:2:6.02:94,6,0	0/0:28,0:28:54.18:0,54,908	0/0:5,0:5:12.04:0,12,245	0/0:14,0:14:36.12:0,36,769	0/0:9,0:9:21.07:0,21,459	0/0:6,0:6:9.03:0,9,174	0/0:7,0:7:12.03:0,12,247	0/0:11,0:11:30.10:0,30,613	0/0:5,0:5:15.05:0,15,299	0/0:7,0:7:12.04:0,12,217	0/0:20,0:20:48.11:0,48,896	0/0:14,0:14:33.11:0,33,624	0/0:27,0:27:54.17:0,54,1043	0/0:9,0:9:21.07:0,21,357	0/0:2,0:2:0.19:0,0,1	0/0:8,0:8:21.04:0,21,297	0/0:8,0:8:24.08:0,24,417	0/0:5,0:5:9.03:0,9,172	1/1:19,1:20:0.02:501,0,0	0/0:10,0:10:21.07:0,21,366	0/0:11,0:11:30.09:0,30,461	0/0:14,0:14:39.13:0,39,703
chr10	104293338	.	TGTGA	T	4882.50	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=10.716;DP=693;FS=13.409;HRun=0;HaplotypeScore=130.4261;InbreedingCoeff=0.8958;MQ=65.83;MQ0=2;MQRankSum=-0.910;QD=30.33;ReadPosRankSum=-0.476;VQSLOD=4.0193;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:75.19:0,75,1755	0/0:15,0:15:42.12:0,42,937	0/0:15,0:7:8.86:0,9,161	0/1:26,0:17:5.77:6,0,307	0/0:27,0:27:81.22:0,81,1834	0/0:21,0:21:28.93:0,29,381	0/0:35,0:35:51.38:0,51,765	1/1:4,32:35:99:1370,99,0	0/0:35,0:35:99:0,105,2262	0/0:33,0:33:99:0,99,2255	0/0:27,0:27:75.18:0,75,1677	0/0:26,0:26:77.95:0,78,1562	0/0:24,0:24:72.19:0,72,1709	0/0:27,0:27:77.97:0,78,1719	0/0:21,0:21:63.15:0,63,1353	0/0:21,0:21:62.95:0,63,1438	0/0:23,0:23:51.16:0,51,1344	0/0:22,0:22:66.19:0,66,1541	1/1:1,18:19:54.03:783,54,0	1/1:0,24:24:41.81:817,42,0	1/1:1,27:28:45.02:894,45,0	0/0:25,0:25:75.10:0,75,1618	0/0:31,0:31:83.96:0,84,1761	0/0:20,0:20:60.05:0,60,1348	0/0:12,0:12:21.04:0,21,241	0/0:31,0:31:93.04:0,93,2233	1/1:0,28:28:51.17:1013,51,0	0/0:11,0:11:30.03:0,30,576
chr10	104293340	.	TGA	T	1525.21	PASS	AB=0.955;AC=11;AF=0.196;AN=56;BaseQRankSum=13.535;DP=692;FS=7.887;HRun=0;HaplotypeScore=116.3477;InbreedingCoeff=0.8405;MQ=63.83;MQ0=2;MQRankSum=-0.393;QD=10.03;ReadPosRankSum=-1.075;VQSLOD=2.8638;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:70.39:0,70,1037	0/0:14,0:14:23.82:0,24,492	0/0:13,0:5:8.76:0,9,103	0/0:25,0:16:5.60:0,6,103	0/0:29,0:29:72.19:0,72,1064	0/1:20,1:21:30.55:31,0,158	0/0:37,0:37:32.11:0,32,318	1/1:33,0:33:61.06:406,61,0	0/0:37,0:37:96.21:0,96,1366	0/0:33,0:33:84.18:0,84,1267	0/0:28,0:28:63.17:0,63,946	0/0:25,1:26:25.99:0,26,816	0/0:24,0:24:63.19:0,63,971	0/0:27,0:27:59.98:0,60,920	0/0:21,0:21:54.12:0,54,768	0/0:20,1:21:14.07:0,14,742	0/0:23,0:23:48.16:0,48,784	0/0:22,0:22:60.13:0,60,873	1/1:18,0:18:42.66:290,43,0	1/1:24,0:24:41.51:291,42,0	1/1:27,0:27:44.26:321,44,0	0/0:25,0:25:60.16:0,60,911	0/0:29,1:30:31.99:0,32,931	0/0:20,0:20:51.13:0,51,775	0/0:12,0:12:12.01:0,12,111	0/0:31,1:32:50.04:0,50,1243	1/1:28,0:28:50.59:364,51,0	0/0:10,0:10:18.06:0,18,295
chr10	104293347	.	GAGAGAGAGAC	G	496.06	PASS	AB=0.976;AC=6;AF=0.107;AN=56;BaseQRankSum=8.755;DP=705;FS=5.955;HRun=0;HaplotypeScore=216.8447;InbreedingCoeff=0.1897;MQ=60.86;MQ0=3;MQRankSum=-4.230;QD=3.79;ReadPosRankSum=-3.071;VQSLOD=1.8043;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:99:0,99,3674	0/0:14,0:14:37.85:0,38,1337	0/0:18,0:7:14.79:0,15,263	0/0:22,0:11:2.78:0,3,100	0/0:28,0:28:75.24:0,75,2538	0/1:21,1:22:48.67:234,0,49	0/1:34,2:36:38.90:39,0,203	0/1:38,0:37:99:180,0,877	0/0:34,0:34:99:0,99,4186	0/0:33,0:33:90.31:0,90,3899	0/0:25,0:25:66.23:0,66,2617	0/0:24,0:24:66.22:0,66,2678	0/0:24,0:24:66.23:0,66,2749	0/0:26,0:26:66.23:0,66,2775	0/0:21,0:21:57.18:0,57,2231	0/0:21,0:21:54.18:0,54,2101	0/0:25,0:25:57.20:0,57,2527	0/0:22,0:22:63.17:0,63,2247	0/1:17,0:17:99:139,0,296	0/0:25,0:25:46.38:0,46,903	0/0:31,0:31:37.26:0,37,1227	0/0:24,0:24:63.20:0,63,2248	0/0:28,0:28:69.22:0,69,2865	0/0:19,0:19:51.17:0,51,2075	1/1:17,1:18:8.61:28,9,0	0/0:33,0:33:93.31:0,93,3660	0/0:28,0:28:52.27:0,52,1237	0/0:11,0:11:21.07:0,21,643
chr10	104293349	.	GAGAGAGAC	G	635.60	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.098;DP=704;FS=2.137;HRun=0;HaplotypeScore=190.4597;InbreedingCoeff=0.8757;MQ=59.86;MQ0=3;MQRankSum=-5.877;QD=8.71;ReadPosRankSum=-1.065;VQSLOD=2.7152;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:87.04:0,87,2690	0/0:14,0:14:30.09:0,30,910	0/0:16,0:6:6.02:0,6,114	0/0:21,0:10:0.35:0,0,0	0/0:28,0:28:45.15:0,45,1603	1/1:7,14:21:24.08:427,24,0	1/1:18,17:35:11.93:190,12,0	0/0:40,0:39:48.14:0,48,943	0/0:34,0:34:84.27:0,84,3098	0/0:33,0:33:84.26:0,84,2854	0/0:24,0:24:51.16:0,51,1825	0/0:25,0:25:60.19:0,60,1981	0/0:24,0:24:57.16:0,57,1973	0/0:25,0:25:57.20:0,57,2037	0/0:22,0:22:51.11:0,51,1592	0/0:21,0:21:39.13:0,39,1465	0/0:25,0:25:51.17:0,51,1913	0/0:22,0:22:45.12:0,45,1474	0/0:18,0:18:18.05:0,18,285	0/0:25,0:25:47.89:0,48,721	0/0:33,0:33:63.17:0,63,1039	0/0:24,0:24:48.10:0,48,1461	0/0:27,0:27:57.20:0,57,2072	0/0:19,0:19:39.13:0,39,1446	1/1:2,15:17:12.04:152,12,0	0/0:34,0:34:81.25:0,81,2528	0/0:26,0:26:60.16:0,60,896	0/0:9,0:9:9.03:0,9,341
chr10	104294418	.	AT	A	1918.83	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=12.147;DP=410;FS=0.000;HRun=10;HaplotypeScore=53.0259;InbreedingCoeff=0.7850;MQ=75.87;MQ0=5;MQRankSum=0.042;QD=15.11;ReadPosRankSum=-2.300;VQSLOD=3.0596;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:29.03:0,29,288	0/0:6,0:6:15.04:0,15,166	0/0:24,0:12:29.55:0,30,230	0/1:27,0:13:10.58:11,0,40	0/0:22,0:22:63.05:0,63,636	0/0:18,0:18:48.10:0,48,512	0/0:9,0:9:21.05:0,21,224	1/1:3,29:32:86.11:705,86,0	0/0:12,0:12:36.04:0,36,369	0/0:16,0:16:45.08:0,45,468	0/0:32,0:32:93.10:0,93,971	0/0:8,0:8:24.05:0,24,257	0/0:13,0:13:33.09:0,33,365	0/0:4,0:4:12.03:0,12,133	0/0:8,0:8:24.06:0,24,265	0/0:8,0:8:24.05:0,24,257	0/0:20,0:20:60.11:0,60,635	0/0:10,0:10:24.02:0,24,252	1/1:5,19:24:42.80:424,43,0	1/1:1,19:20:57.67:482,58,0	1/1:1,1:2:3:26,3,0	0/0:3,0:3:6:0,6,58	0/0:14,0:14:36.09:0,36,391	0/0:5,0:5:15.04:0,15,166	0/0:13,0:13:30.07:0,30,325	0/0:22,0:21:59.18:0,59,624	1/1:3,18:22:50.98:441,51,0	0/0:2,0:2:3.01:0,3,33
chr10	104295491	.	CAGAGATAG	C	1500.13	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.604;DP=844;FS=0.000;HRun=0;HaplotypeScore=243.4909;InbreedingCoeff=0.9809;MQ=64.86;MQ0=7;MQRankSum=-4.493;QD=22.73;ReadPosRankSum=-4.383;VQSLOD=2.2438;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:81.26:0,81,3079	0/0:13,0:13:36:0,36,1021	0/0:53,0:27:62.57:0,63,1295	0/0:55,0:31:15.46:0,15,867	0/0:24,0:23:60.21:0,60,2077	1/1:3,17:21:11.75:259,12,0	1/1:11,9:20:33.20:666,33,0	0/0:40,0:36:90.28:0,90,2871	0/0:32,0:32:84.25:0,84,3096	0/0:43,0:43:99:0,114,3737	0/0:28,0:28:71.71:0,72,2371	0/0:21,0:21:60.18:0,60,2103	0/0:20,0:20:54.13:0,54,1922	0/0:22,0:22:66.20:0,66,2432	0/0:23,0:23:66.18:0,66,2223	0/0:29,0:29:72.23:0,72,2478	0/0:28,0:28:57.18:0,57,1789	0/0:18,0:18:30.41:0,30,1313	0/0:27,0:25:72.01:0,72,2143	0/0:47,0:46:54.60:0,55,1976	0/0:39,0:38:39.13:0,39,1389	0/0:32,0:32:90.01:0,90,2908	0/0:36,0:36:99:0,108,3283	0/0:36,0:36:77.90:0,78,2758	1/1:0,25:25:27.09:714,27,0	0/0:39,0:39:99:0,108,3622	0/0:30,0:30:57.15:0,57,1947	0/0:8,0:8:20.89:0,21,644
chr10	104295497	.	TAG	T	343.54	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.060;DP=855;FS=1.617;HRun=0;HaplotypeScore=166.0131;InbreedingCoeff=0.9679;MQ=65.10;MQ0=9;MQRankSum=-4.968;QD=5.29;ReadPosRankSum=-3.891;VQSLOD=2.3458;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:84.18:0,84,1269	0/0:10,0:10:24.08:0,24,391	0/0:66,0:27:37.50:0,37,429	0/0:66,0:37:21.46:0,21,309	0/0:26,0:25:34.33:0,34,950	1/1:19,0:19:8.97:72,9,0	1/1:21,0:21:20.93:168,21,0	0/0:36,1:34:47.34:0,47,1181	0/0:33,0:33:84.28:0,84,1327	0/0:41,0:41:93.79:0,94,1493	0/0:24,2:26:23.75:0,24,872	0/0:23,0:23:60.17:0,60,904	0/0:21,0:21:51.15:0,51,801	0/0:22,0:22:60.18:0,60,945	0/0:24,0:24:60.19:0,60,928	0/0:26,0:26:63.20:0,63,999	0/0:30,0:30:54.07:0,54,767	0/0:19,0:19:33.43:0,33,545	0/0:24,0:23:36.37:0,36,850	0/0:43,0:43:56.95:0,57,888	0/0:31,0:31:33.11:0,33,522	0/0:30,1:31:41.29:0,41,1123	0/0:40,2:42:53.38:0,53,1339	0/0:32,0:32:70.06:0,70,1069	1/1:25,0:25:26.99:240,27,0	0/0:40,0:40:90.30:0,90,1433	0/0:31,0:31:62.32:0,62,851	0/0:6,0:6:15.05:0,15,240
chr10	104295588	.	CATAG	C	3789.77	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.294;DP=788;FS=7.372;HRun=0;HaplotypeScore=161.4068;InbreedingCoeff=0.9915;MQ=55.42;MQ0=8;MQRankSum=-2.480;QD=26.88;ReadPosRankSum=-2.854;VQSLOD=2.6361;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:57.13:0,57,772	0/0:14,0:14:39.13:0,39,743	0/0:35,0:13:17.71:0,18,216	0/0:14,0:10:12.70:0,13,239	0/0:45,0:43:99:0,111,1915	0/0:24,0:24:60.10:0,60,1150	0/0:14,0:14:36.11:0,36,583	1/1:10,35:32:77.99:981,78,0	0/0:27,0:27:58.10:0,58,711	0/0:50,0:50:99:0,138,2685	0/0:26,0:26:75.25:0,75,1423	0/0:26,0:26:75.21:0,75,1295	0/0:23,0:23:57:0,57,1070	0/0:18,0:18:48.16:0,48,869	0/0:21,0:19:54.17:0,54,954	0/0:31,0:30:66.22:0,66,1164	0/0:26,0:26:49.86:0,50,599	0/0:24,0:23:50.38:0,50,588	1/1:3,14:15:39.08:512,39,0	1/1:31,7:34:69.70:1030,70,0	1/1:16,0:15:27.05:415,27,0	0/0:30,0:29:68.69:0,69,1257	0/0:38,0:38:72.24:0,72,1328	0/0:28,0:27:51.17:0,51,916	0/0:32,0:32:76.77:0,77,1375	0/0:52,0:50:99:0,135,2554	1/1:23,2:25:68.03:851,68,0	0/0:22,0:22:50.98:0,51,777
chr10	104295654	.	TACAG	T	1434.58	PASS	AB=0.552;AC=7;AF=0.125;AN=56;BaseQRankSum=-2.993;DP=753;FS=0.616;HRun=0;HaplotypeScore=172.8534;InbreedingCoeff=0.9287;MQ=54.13;MQ0=23;MQRankSum=3.173;QD=14.79;ReadPosRankSum=-0.775;VQSLOD=3.3159;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:57.40:0,57,740	0/0:12,0:12:30.08:0,30,510	0/0:19,0:8:24.01:0,24,351	0/0:20,0:9:23.99:0,24,400	0/0:33,0:31:75.17:0,75,1184	1/1:18,0:18:36.09:521,36,0	1/1:14,0:12:14.34:233,14,0	0/0:38,0:31:49.94:0,50,474	0/0:34,0:33:61.02:0,61,872	0/0:46,0:46:99:0,111,2139	0/0:32,0:32:71.02:0,71,1160	0/0:19,0:19:44.16:0,44,746	0/0:20,0:20:41.86:0,42,631	0/0:13,0:13:33.10:0,33,630	0/0:38,0:36:86.32:0,86,1418	0/0:26,0:24:60.10:0,60,1028	0/0:18,0:21:29.93:0,30,391	0/0:28,0:29:40.43:0,40,445	0/0:15,0:9:17.38:0,17,217	0/0:42,0:39:69.24:0,69,1232	0/0:24,0:23:27.09:0,27,430	0/0:41,0:39:78.26:0,78,1255	0/1:6,30:37:0.27:1,0,0	0/0:25,0:25:43.66:0,44,744	1/1:27,0:26:60:820,60,0	0/0:33,0:31:66.05:0,66,1092	0/0:27,0:27:63.82:0,64,919	0/0:9,0:13:18.06:0,18,301
chr10	104297318	.	G	GGA	2333.91	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=-0.446;DP=378;FS=5.380;HRun=0;HaplotypeScore=128.2074;InbreedingCoeff=0.9423;MQ=36.59;MQ0=10;MQRankSum=-1.086;QD=28.12;ReadPosRankSum=-4.445;VQSLOD=3.7855;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:18.65:0,19,452	0/0:6,0:6:17.94:0,18,182	./.	./.	0/0:15,0:15:14.82:0,15,224	0/0:8,0:8:18.05:0,18,253	0/0:21,0:19:35.95:0,36,516	1/1:3,10:13:38.34:602,38,0	0/0:10,0:10:14.61:0,15,224	0/0:18,0:18:32.97:0,33,487	0/0:9,0:10:11.23:0,11,285	0/0:14,0:14:26.56:0,27,310	0/0:8,0:8:17.92:0,18,265	0/0:15,0:15:29.96:0,30,452	0/0:15,0:15:28.44:0,28,565	0/0:9,0:9:15.64:0,16,283	0/0:21,0:20:29.46:0,29,405	0/0:17,0:15:18.03:0,18,292	1/1:11,5:14:37.89:618,38,0	1/1:7,6:16:30.01:466,30,0	1/1:10,1:10:9.78:70,10,0	0/0:10,0:10:26.66:0,27,317	0/0:13,0:13:26.63:0,27,355	0/0:19,0:18:29.84:0,30,403	0/0:15,0:16:36.04:0,36,502	0/0:13,0:12:29.98:0,30,406	1/1:6,19:25:44.98:746,45,0	0/0:11,0:11:8.31:0,8,182
chr10	104297545	.	AT	A	3106.95	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.241;DP=409;FS=2.521;HRun=9;HaplotypeScore=52.8262;InbreedingCoeff=0.9365;MQ=66.89;MQ0=0;MQRankSum=2.105;QD=21.43;ReadPosRankSum=-0.888;VQSLOD=3.9109;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:58.41:0,58,652	0/0:3,0:3:9.03:0,9,104	0/0:8,0:6:4.60:0,5,34	0/0:14,0:12:8.53:0,9,69	0/0:16,0:16:39.12:0,39,449	1/1:1,17:18:48.02:439,48,0	1/1:0,9:9:27.01:247,27,0	1/1:4,16:20:48:435,48,0	0/0:10,0:10:30.09:0,30,346	0/0:23,0:23:51.14:0,51,577	0/0:15,0:15:36.09:0,36,405	0/0:10,0:10:21.06:0,21,242	0/0:12,0:12:30.09:0,30,346	0/0:17,0:17:42.12:0,42,485	0/0:15,0:15:27.06:0,27,301	0/0:15,0:15:45.13:0,45,519	0/0:22,0:22:60.18:0,60,692	0/0:17,0:17:48.14:0,48,554	1/1:4,25:29:72.02:654,72,0	1/1:0,12:12:30.02:275,30,0	1/1:3,14:17:42.02:384,42,0	0/0:3,0:3:9.03:0,9,104	0/0:12,0:12:33.09:0,33,371	0/0:5,0:5:9.03:0,9,103	1/1:4,13:17:36.02:330,36,0	0/0:19,0:20:54.11:0,54,600	1/1:2,21:23:60.02:549,60,0	0/0:7,0:7:18.05:0,18,208
chr10	104298024	.	TCA	T	1011.82	PASS	AB=0.962;AC=7;AF=0.125;AN=56;BaseQRankSum=2.313;DP=819;FS=10.849;HRun=0;HaplotypeScore=239.4328;InbreedingCoeff=0.8332;MQ=58.28;MQ0=4;MQRankSum=0.868;QD=12.49;ReadPosRankSum=-0.552;VQSLOD=1.8044;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:51:73.67:0,74,1099	0/0:8,0:8:18.06:0,18,289	0/0:42,0:31:6.67:0,7,466	0/0:37,0:26:33.11:0,33,496	0/1:24,1:25:3.22:3,0,412	1/1:6,7:13:20.71:220,21,0	1/1:6,18:24:54.05:603,54,0	0/0:42,0:40:47.64:0,48,515	0/0:49,0:49:96.29:0,96,1382	0/0:29,1:30:33.98:0,34,990	0/0:21,1:22:11.90:0,12,647	0/0:28,0:28:60.20:0,60,919	0/0:23,0:23:51.17:0,51,788	0/0:26,1:27:12.66:0,13,697	0/0:37,2:39:17.96:0,18,1206	0/0:30,0:30:51.16:0,51,762	0/0:27,0:26:57.18:0,57,878	0/0:21,0:21:52.72:0,53,793	0/0:18,0:22:23.89:0,24,314	0/0:12,0:18:23.18:0,23,160	0/0:43,0:49:24.76:0,25,176	0/0:27,0:27:51.95:0,52,759	0/0:25,0:25:48.83:0,49,766	0/0:36,0:36:60.17:0,60,905	1/1:6,13:19:28.15:328,28,0	0/0:41,0:42:97.88:0,98,1463	0/0:18,0:25:29.41:0,29,336	0/0:13,0:15:39.11:0,39,566
chr10	104298074	.	A	AC	1241.10	PASS	AB=0.839;AC=10;AF=0.179;AN=56;BaseQRankSum=10.858;DP=909;FS=98.882;HRun=1;HaplotypeScore=369.1229;InbreedingCoeff=-0.2170;MQ=49.81;MQ0=3;MQRankSum=-8.451;QD=3.74;ReadPosRankSum=0.529;VQSLOD=0.6465;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:37:50.26:0,50,577	0/1:17,5:22:99:182,0,181	0/0:35,0:28:68.90:0,69,433	0/0:40,0:23:48.92:0,49,350	0/1:26,9:35:96.65:97,0,195	0/0:20,0:20:42.86:0,43,268	0/0:21,0:21:55.52:0,56,348	0/0:35,0:35:82.82:0,83,556	0/0:40,2:42:99:0,100,640	0/1:46,6:52:99:161,0,715	0/1:19,6:26:99:204,0,174	0/0:28,0:28:73.57:0,74,479	0/0:27,0:28:31.82:0,32,454	0/0:37,0:37:78.66:0,79,525	0/0:47,0:49:87.93:0,88,727	0/0:33,0:33:80.08:0,80,551	0/0:22,0:21:53.77:0,54,338	0/0:19,0:19:56.09:0,56,380	0/0:20,0:21:25.77:0,26,240	0/1:21,10:31:99:184,0,178	0/0:35,0:34:58.73:0,59,392	0/1:31,10:42:99:170,0,254	0/1:28,7:36:99:154,0,313	0/1:23,1:23:17.68:18,0,210	0/1:41,2:43:97.06:97,0,248	0/0:50,1:52:51.02:0,51,717	0/0:20,0:20:53.53:0,54,419	0/1:16,3:20:99:120,0,230
chr10	104298119	.	AAG	A	893.25	PASS	AB=0.771;AC=8;AF=0.143;AN=56;BaseQRankSum=9.969;DP=608;FS=40.005;HRun=0;HaplotypeScore=208.9857;InbreedingCoeff=-0.1511;MQ=40.64;MQ0=2;MQRankSum=-7.174;QD=4.38;ReadPosRankSum=4.083;VQSLOD=1.6710;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:60.12:0,60,1060	0/0:13,0:13:30.10:0,30,590	0/0:20,0:12:33.11:0,33,655	0/0:21,0:17:29.20:0,29,877	0/0:17,11:28:34.02:0,34,615	0/0:12,1:13:33.07:0,33,628	0/0:8,0:8:22.83:0,23,351	0/1:26,2:28:1.69:2,0,1149	0/0:27,1:28:77.88:0,78,1425	0/1:30,10:40:99:352,0,1508	0/0:8,2:10:24.51:0,25,420	0/0:21,1:22:57.09:0,57,982	0/0:23,3:26:27.20:0,27,1195	0/0:26,1:27:69.49:0,69,1191	0/0:31,3:34:90.58:0,91,1613	0/0:28,1:29:78.07:0,78,1475	0/0:14,0:14:27.03:0,27,468	0/0:12,0:12:30.10:0,30,586	0/0:15,0:14:42.14:0,42,824	0/1:9,12:21:99:158,0,449	0/0:19,2:21:35.60:0,36,704	0/1:16,11:27:99:188,0,636	0/1:15,5:20:5:5,0,708	0/0:20,1:20:27.56:0,28,549	0/1:11,13:23:99:139,0,500	0/1:28,4:31:15.73:16,0,1488	0/0:16,0:16:45.08:0,45,831	0/1:8,4:12:99:160,0,394
chr10	104478363	.	T	TACACACACAC	4173.48	PASS	AB=0.789;AC=10;AF=0.179;AN=56;BaseQRankSum=-2.830;DP=677;FS=8.531;HRun=0;HaplotypeScore=199.6518;InbreedingCoeff=0.7763;MQ=66.37;MQ0=1;MQRankSum=-5.632;QD=27.46;ReadPosRankSum=-5.911;VQSLOD=0.5801;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:39:84.23:0,84,2213	0/0:7,0:7:15.02:0,15,389	0/0:36,0:32:42.13:0,42,914	0/0:28,0:25:17.25:0,17,939	0/0:14,0:14:30.09:0,30,799	0/0:19,0:18:51.16:0,51,1399	0/0:32,0:33:78.22:0,78,2163	1/1:16,0:30:62.87:1299,63,0	0/0:22,0:24:54.18:0,54,1570	0/0:25,0:25:69.22:0,69,1903	0/0:17,0:17:30.06:0,30,828	0/0:27,0:27:69.22:0,69,1919	0/0:19,0:21:54.14:0,54,1491	0/0:26,0:26:69.10:0,69,1827	0/0:19,0:18:45.14:0,45,1250	0/0:17,0:17:36.12:0,36,1042	0/0:35,0:36:90.29:0,90,2572	0/1:25,0:26:0.09:0,0,1689	1/1:19,1:28:42.07:1130,42,0	0/1:3,3:11:84.66:85,0,86	1/1:23,11:37:6.68:305,7,0	0/0:27,0:28:60.20:0,60,1746	0/0:19,0:19:48.13:0,48,1372	0/0:32,0:33:78.27:0,78,2235	0/0:22,0:23:66.23:0,66,1941	0/0:26,0:26:54.12:0,54,1464	1/1:7,11:20:33.11:1354,33,0	0/0:7,0:7:18.06:0,18,502
chr10	104479725	.	C	CAGGCTGCCTACC	21895.51	PASS	AB=0.667;AC=55;AF=0.982;AN=56;BaseQRankSum=-2.545;DP=242;FS=3.388;HRun=0;HaplotypeScore=244.6521;InbreedingCoeff=-0.0390;MQ=56.37;MQ0=0;MQRankSum=-1.090;QD=90.48;ReadPosRankSum=0.383;VQSLOD=4.7583;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:26.86:1140,27,0	1/1:3,0:3:6.02:208,6,0	1/1:2,1:5:12.04:359,12,0	0/1:2,0:4:12.43:255,0,12	1/1:8,0:8:16.03:752,16,0	1/1:7,0:7:21.07:957,21,0	1/1:10,0:10:10.55:699,11,0	1/1:14,0:14:38.62:1564,39,0	1/1:6,0:6:12.04:567,12,0	1/1:12,0:12:27.09:1123,27,0	1/1:9,0:9:15.52:684,16,0	1/1:7,0:7:14.92:577,15,0	1/1:13,0:13:30.10:1432,30,0	1/1:4,0:4:12.04:545,12,0	1/1:11,0:11:30.10:1454,30,0	1/1:8,0:8:18.06:856,18,0	1/1:9,0:9:26.95:863,27,0	1/1:5,0:5:6.02:327,6,0	1/1:12,0:12:30.10:1310,30,0	1/1:17,0:17:26.40:1161,26,0	1/1:6,0:6:12.04:265,12,0	1/1:9,0:9:19.90:712,20,0	1/1:5,0:5:11.79:354,12,0	1/1:7,0:7:15.05:658,15,0	1/1:7,0:7:15.05:705,15,0	1/1:12,0:12:28.33:1056,28,0	1/1:13,0:13:10.81:1007,11,0	1/1:4,0:4:9.03:308,9,0
chr10	104479922	.	G	GCACACACA	685.74	PASS	AB=1.000;AC=13;AF=0.250;AN=52;BaseQRankSum=2.029;DP=489;FS=3.602;HRun=0;HaplotypeScore=153.8447;InbreedingCoeff=0.6855;MQ=71.49;MQ0=4;MQRankSum=-4.584;QD=5.96;ReadPosRankSum=-3.181;VQSLOD=1.9431;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:38:60.04:0,60,1456	0/0:3,0:3:3.01:0,3,76	0/0:33,0:23:5.87:0,6,287	0/1:37,0:30:6.95:7,0,201	0/0:20,0:21:33.11:0,33,812	./.	1/1:10,0:10:0.47:1,0,0	1/1:23,0:21:13.84:211,14,0	0/0:17,0:17:15.49:0,15,678	0/0:22,0:25:48.09:0,48,985	0/0:14,0:14:27.08:0,27,631	0/0:23,0:21:44.76:0,45,1071	0/0:12,0:12:21.07:0,21,482	0/0:17,0:16:15.05:0,15,350	0/0:15,0:15:23.57:0,24,498	0/0:13,0:13:24.08:0,24,557	0/0:15,0:15:21.07:0,21,482	0/0:23,0:23:54.17:0,54,1183	1/1:8,0:9:15.05:385,15,0	./.	1/1:15,0:15:0.47:1,0,0	0/0:14,0:14:30.09:0,30,697	0/0:19,0:19:36.12:0,36,859	0/0:17,0:21:41.94:0,42,958	1/1:3,9:11:3.01:85,3,0	0/0:17,0:16:27.04:0,27,560	1/1:9,0:9:6.02:135,6,0	0/0:10,0:10:24.08:0,24,595
chr10	104479947	.	C	CAG	214.99	PASS	AB=0.911;AC=18;AF=0.321;AN=56;BaseQRankSum=5.664;DP=504;FS=5.900;HRun=0;HaplotypeScore=97.9262;InbreedingCoeff=0.4864;MQ=56.94;MQ0=10;MQRankSum=-2.638;QD=1.26;ReadPosRankSum=-3.683;VQSLOD=0.5750;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:35.88:0,36,304	0/0:4,0:4:2.98:0,3,21	1/1:24,0:10:2.04:6,2,0	0/1:31,0:15:10.40:10,0,16	0/0:14,0:14:18:0,18,173	0/1:11,0:8:0:0,0,0	1/1:12,0:11:8.88:60,9,0	0/0:13,0:11:3.27:0,3,22	0/0:17,0:18:26.76:0,27,221	0/0:21,0:21:17.79:0,18,152	0/0:12,0:12:5.99:0,6,48	0/0:28,0:26:21.45:0,21,195	0/1:13,0:14:6.14:6,0,101	0/0:19,0:18:23.94:0,24,199	0/1:9,11:20:24.99:83,0,25	0/0:16,0:16:14.96:0,15,127	0/0:15,0:15:20.92:0,21,186	0/0:33,0:37:59.27:0,59,540	1/1:10,0:10:14.29:96,14,0	1/1:4,0:8:1.55:4,2,0	1/1:17,0:17:5.97:46,6,0	0/0:16,0:16:8.99:0,9,81	0/0:18,0:18:9.01:0,9,91	0/0:28,0:27:41.98:0,42,391	1/1:15,0:12:5.74:37,6,0	0/0:23,0:21:26.84:0,27,221	1/1:8,0:8:3:25,3,0	0/0:8,0:8:3.01:0,3,34
chr10	104480017	.	T	TG	1848.29	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=10.865;DP=596;FS=10.589;HRun=1;HaplotypeScore=105.1980;InbreedingCoeff=0.7800;MQ=95.02;MQ0=0;MQRankSum=-8.310;QD=18.12;ReadPosRankSum=-1.604;VQSLOD=2.5648;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1557	0/0:5,0:5:15.05:0,15,195	0/0:15,0:15:42.12:0,42,532	0/0:46,0:45:99:0,116,1384	0/0:12,0:12:33.09:0,33,414	1/1:1,15:16:45.14:587,45,0	1/1:7,14:21:48.14:632,48,0	0/0:25,0:25:35.82:0,36,277	0/0:21,0:21:60.15:0,60,759	0/0:19,0:19:54.18:0,54,700	0/0:9,0:9:27.09:0,27,350	0/0:28,0:28:84.26:0,84,1077	0/0:17,0:17:51.15:0,51,648	0/0:30,0:30:87.28:0,87,1128	0/0:35,0:35:86.81:0,87,1114	0/0:18,0:18:54.18:0,54,701	0/0:24,0:24:63.20:0,63,816	0/0:30,0:30:72.12:0,72,879	0/0:19,0:19:23.47:0,23,169	0/0:9,0:9:15.53:0,16,52	0/1:44,0:44:5.94:6,0,113	0/0:16,0:16:48.16:0,48,623	0/0:11,0:11:33.11:0,33,428	0/0:18,0:18:48.13:0,48,594	1/1:1,20:21:60.06:768,60,0	0/0:22,0:22:66.21:0,66,857	0/0:19,0:19:0.10:0,0,34	0/0:4,0:4:12.04:0,12,156
chr10	104480021	.	A	AC	6013.60	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.597;DP=608;FS=2.028;HRun=1;HaplotypeScore=92.0555;InbreedingCoeff=0.9918;MQ=95.04;MQ0=0;MQRankSum=-7.608;QD=33.04;ReadPosRankSum=-1.936;VQSLOD=4.1530;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,1471	0/0:5,0:5:15.05:0,15,195	0/0:19,0:19:57.11:0,57,661	0/0:42,0:42:99:0,114,1386	0/0:11,0:11:33.11:0,33,426	1/1:18,0:18:43.47:583,43,0	1/1:23,0:23:42.39:595,42,0	1/1:0,23:23:62.21:843,62,0	0/0:22,0:22:60.19:0,60,766	0/0:18,0:18:54.18:0,54,698	0/0:9,0:9:27.09:0,27,350	0/0:30,0:30:90.26:0,90,1123	0/0:17,0:17:51.17:0,51,661	0/0:31,0:31:93.25:0,93,1185	0/0:36,0:36:89.82:0,90,1153	0/0:18,0:18:54.18:0,54,698	0/0:24,0:24:69.22:0,69,892	0/0:29,0:29:69.18:0,69,863	1/1:5,15:20:49.10:665,49,0	1/1:0,9:9:27.09:383,27,0	1/1:1,45:46:99:1473,114,0	0/0:16,0:16:48.16:0,48,622	0/0:11,0:11:33.11:0,33,428	0/0:20,0:20:60.11:0,60,716	1/1:22,0:22:54.18:715,54,0	0/0:23,0:23:66.21:0,66,857	1/1:0,21:21:54.18:758,54,0	0/0:4,0:4:12.04:0,12,156
chr10	104480111	.	C	CCACA	2689.86	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.675;DP=678;FS=11.964;HRun=0;HaplotypeScore=130.9641;InbreedingCoeff=0.9903;MQ=78.56;MQ0=0;MQRankSum=-5.846;QD=29.89;ReadPosRankSum=-2.322;VQSLOD=2.5151;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,2607	0/0:5,0:5:15.05:0,15,299	0/0:32,0:32:90.22:0,90,1531	0/0:28,0:27:72.31:0,72,1046	0/0:20,0:20:45.14:0,45,804	0/0:18,0:18:23.13:0,23,457	0/0:31,0:31:27.40:0,27,736	1/1:4,15:21:53.36:1017,53,0	0/0:28,0:28:84.22:0,84,1527	0/0:20,0:20:57.16:0,57,1022	0/0:10,0:10:27.08:0,27,468	0/0:37,0:37:99:0,105,1957	0/0:18,0:18:54.13:0,54,974	0/0:23,0:23:66.01:0,66,1223	0/0:31,0:31:90.29:0,90,1664	0/0:20,0:20:53.97:0,54,987	0/0:39,0:39:99:0,111,2086	0/0:37,0:37:99:0,111,1988	1/1:9,3:13:21.92:374,22,0	1/1:4,4:9:18:341,18,0	1/1:17,15:32:29.96:465,30,0	0/0:17,0:17:51.13:0,51,904	0/0:21,0:21:54.18:0,54,1027	0/0:46,0:45:99:0,129,2414	0/0:19,0:19:48.05:0,48,500	0/0:34,0:34:99:0,99,1812	1/1:6,7:14:27.09:668,27,0	0/0:6,0:6:17.95:0,18,315
chr10	104481109	.	T	TC	2675.46	PASS	AB=0.929;AC=7;AF=0.125;AN=56;BaseQRankSum=-9.724;DP=628;FS=2.285;HRun=0;HaplotypeScore=57.7912;InbreedingCoeff=0.8576;MQ=87.18;MQ0=0;MQRankSum=-1.588;QD=31.85;ReadPosRankSum=0.926;VQSLOD=3.4346;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,1641	0/1:12,1:13:7.66:8,0,429	0/0:26,0:26:77.60:0,78,939	0/0:17,0:16:25.14:0,25,295	0/0:22,0:22:66.20:0,66,889	1/1:1,23:23:60.20:939,60,0	1/1:0,24:24:69.23:1079,69,0	0/0:24,0:24:69.20:0,69,896	0/0:18,0:18:54.17:0,54,740	0/0:33,0:33:96.32:0,96,1328	0/0:17,0:17:45.12:0,45,593	0/0:23,0:23:69.04:0,69,919	0/0:16,0:16:48.16:0,48,671	0/0:17,0:17:48.13:0,48,637	0/0:24,0:24:72.23:0,72,989	0/0:20,0:20:60.20:0,60,839	0/0:20,0:20:60.17:0,60,804	0/0:17,0:16:48.16:0,48,668	0/0:16,0:16:48.12:0,48,619	0/0:16,0:16:48.10:0,48,631	0/0:39,0:39:99:0,117,1635	0/0:32,0:32:96.31:0,96,1306	0/0:19,0:19:54.18:0,54,755	0/0:33,0:33:99:0,99,1366	1/1:0,23:23:51.17:797,51,0	0/0:18,0:18:54.16:0,54,710	0/0:22,0:22:66.20:0,66,890	0/0:12,0:12:36.12:0,36,503
chr10	104482388	.	G	GT	4242.95	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.789;DP=262;FS=37.723;HRun=1;HaplotypeScore=136.4204;InbreedingCoeff=0.7680;MQ=81.47;MQ0=0;MQRankSum=-5.756;QD=17.68;ReadPosRankSum=2.430;VQSLOD=2.8688;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:11:31.96:238,32,0	1/1:0,4:4:2.86:91,3,0	0/0:12,0:12:23.77:0,24,178	0/0:9,0:10:10.87:0,11,135	1/1:1,11:12:26.02:109,26,0	1/1:0,4:4:11.58:81,12,0	1/1:2,11:12:31.93:226,32,0	1/1:4,5:9:20.91:193,21,0	1/1:1,7:8:16.56:140,17,0	1/1:1,11:12:34.73:300,35,0	1/1:1,8:9:19.48:124,19,0	1/1:0,3:3:8.47:42,8,0	1/1:1,11:12:31.53:262,32,0	1/1:1,11:12:33.73:253,34,0	1/1:2,15:17:43.95:303,44,0	1/1:1,6:7:20.44:163,20,0	1/1:1,4:5:14.59:85,15,0	1/1:0,6:6:14.87:110,15,0	1/1:2,7:9:23.44:162,23,0	1/1:2,13:15:36.11:268,36,0	1/1:1,10:11:16.62:97,17,0	1/1:1,10:11:31.16:176,31,0	1/1:0,8:8:23.05:166,23,0	1/1:1,7:7:8.26:37,8,0	1/1:0,7:7:20.08:124,20,0	1/1:1,15:16:47.41:348,47,0	1/1:1,6:7:18.66:90,19,0	1/1:0,3:3:8.79:56,9,0
chr10	104483187	.	A	AGTGT	530.21	PASS	AB=1.000;AC=19;AF=0.396;AN=48;BaseQRankSum=-1.516;DP=457;FS=8.829;HRun=0;HaplotypeScore=78.2985;InbreedingCoeff=0.4534;MQ=47.87;MQ0=16;MQRankSum=0.308;QD=3.00;ReadPosRankSum=-0.761;VQSLOD=0.1234;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:24:6.95:7,0,141	0/0:8,0:8:3:0,3,28	./.	./.	1/1:13,0:20:2.74:12,3,0	0/1:13,0:12:0:0,0,0	0/0:16,0:19:9:0,9,81	./.	0/0:16,0:16:6.01:0,6,78	1/1:9,6:17:24.05:307,24,0	1/1:6,6:13:5.98:88,6,0	0/0:16,0:14:6.02:0,6,92	0/0:15,0:11:3.01:0,3,46	0/0:19,0:18:20.49:0,20,228	0/0:13,0:12:8.94:0,9,87	0/1:11,0:11:9.40:9,0,165	0/0:20,0:22:23.82:0,24,258	0/0:13,0:13:14.75:0,15,187	1/1:8,0:7:2.98:21,3,0	1/1:9,0:9:9:102,9,0	1/1:18,0:15:3.01:42,3,0	0/1:18,0:20:2.99:3,0,124	0/0:6,0:6:2.96:0,3,20	0/0:23,0:21:21:0,21,256	0/0:9,0:16:11.95:0,12,100	0/1:8,0:8:0:0,0,0	1/1:13,0:10:8.97:87,9,0	./.
chr10	104483243	.	GCAA	G	1432.29	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=3.190;DP=491;FS=3.147;HRun=0;HaplotypeScore=99.3364;InbreedingCoeff=0.9381;MQ=60.95;MQ0=8;MQRankSum=-2.948;QD=31.83;ReadPosRankSum=-0.776;VQSLOD=3.6330;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:33:96.32:0,96,2063	0/0:4,0:4:9.03:0,9,198	0/0:36,0:23:37.10:0,37,1178	0/0:38,0:26:59.83:0,60,1061	0/0:19,0:19:42.14:0,42,884	0/0:7,0:6:15.05:0,15,330	0/0:19,0:19:51.05:0,51,984	1/1:1,9:10:27.03:359,27,0	0/0:19,0:17:42.13:0,42,883	0/0:19,0:18:54.17:0,54,1113	0/0:10,0:10:15.05:0,15,329	0/0:15,0:13:30.10:0,30,660	0/0:13,0:11:27.09:0,27,587	0/0:26,0:23:54.59:0,55,1124	0/0:11,0:10:30.10:0,30,659	0/0:18,0:18:39.13:0,39,858	0/0:22,0:22:60.20:0,60,1276	0/0:13,0:12:33.11:0,33,728	1/1:3,2:3:6.01:75,6,0	1/1:0,10:10:24.08:363,24,0	1/1:0,8:8:18.06:277,18,0	0/0:30,0:29:81.19:0,81,1683	0/0:20,0:20:51.17:0,51,1092	0/0:34,0:33:87.30:0,87,1873	0/0:16,0:16:30.06:0,30,613	0/0:17,0:16:48.16:0,48,1023	1/1:0,12:11:33.11:526,33,0	0/0:3,0:3:9.03:0,9,197
chr10	104484694	.	CTCCT	C	532.83	PASS	AB=0.903;AC=8;AF=0.154;AN=52;BaseQRankSum=3.939;DP=598;FS=12.573;HRun=0;HaplotypeScore=93.9353;InbreedingCoeff=0.5740;MQ=63.52;MQ0=3;MQRankSum=0.982;QD=5.49;ReadPosRankSum=-1.920;VQSLOD=0.3094;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:41.26:0,41,1807	0/1:7,1:8:31.01:31,0,216	./.	./.	0/0:14,0:14:15.05:0,15,331	1/1:16,0:18:18.01:212,18,0	1/1:23,8:31:14.75:230,15,0	0/0:33,0:32:3.01:0,3,37	0/0:23,0:23:18.05:0,18,365	0/0:20,0:20:12.04:0,12,280	0/0:18,0:18:24.08:0,24,561	0/0:16,0:16:17.97:0,18,323	0/0:20,0:20:33.11:0,33,749	0/0:20,0:20:24.08:0,24,558	0/0:21,0:21:24.08:0,24,514	0/0:19,0:19:27.09:0,27,604	0/0:33,0:33:8.14:0,8,1092	0/0:30,0:30:39.13:0,39,879	0/0:24,0:19:6.02:0,6,140	0/0:12,0:12:9.03:0,9,210	0/0:29,0:29:30.09:0,30,633	0/0:19,0:19:15.05:0,15,319	0/0:15,0:15:30.09:0,30,655	0/0:20,0:20:27.09:0,27,630	1/1:11,7:18:9.03:138,9,0	0/1:20,2:22:65:65,0,420	0/0:27,0:27:30.10:0,30,687	0/0:15,0:15:21.07:0,21,488
chr10	104485689	.	GTC	G	4081.17	PASS	AB=0.919;AC=18;AF=0.321;AN=56;BaseQRankSum=11.699;DP=705;FS=0.362;HRun=0;HaplotypeScore=110.2915;InbreedingCoeff=0.7576;MQ=77.57;MQ0=6;MQRankSum=-0.016;QD=15.52;ReadPosRankSum=0.243;VQSLOD=3.5960;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,3:53:96.07:0,96,2030	0/0:2,0:2:3.01:0,3,48	0/0:38,0:26:36.29:0,36,467	0/0:62,0:46:37.78:0,38,851	0/0:18,1:19:5.77:0,6,589	1/1:3,0:26:53.97:266,54,0	1/1:11,0:37:59.66:293,60,0	1/1:7,19:26:54.15:643,54,0	0/0:26,1:27:26.85:0,27,932	0/0:31,0:31:36.25:0,36,1043	0/0:17,0:17:39.11:0,39,583	0/0:12,1:13:2.76:0,3,544	0/0:19,1:20:17.79:0,18,754	0/0:17,1:18:2.73:0,3,540	0/0:16,0:16:42.14:0,42,678	0/0:20,0:20:60.20:0,60,968	0/0:24,1:25:15.23:0,15,713	0/0:27,0:27:75.26:0,75,1210	1/1:4,11:16:35.94:414,36,0	1/1:3,12:15:27.08:327,27,0	1/1:15,48:63:99:1564,129,0	0/0:15,0:16:36.10:0,36,531	0/1:13,1:14:6.28:6,0,405	0/1:34,2:38:10.76:11,0,1162	1/1:3,0:9:17.04:84,17,0	0/0:26,0:26:63.21:0,63,994	1/1:2,17:19:39.11:473,39,0	0/0:11,0:11:24.08:0,24,387
chr10	104486906	.	C	CACACACAT	2612.88	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=10.428;DP=801;FS=5.212;HRun=0;HaplotypeScore=242.0048;InbreedingCoeff=0.3741;MQ=59.86;MQ0=9;MQRankSum=-5.871;QD=13.61;ReadPosRankSum=-4.128;VQSLOD=1.6566;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:49:99:0,104,2477	0/0:14,0:14:39.09:0,39,868	0/0:56,0:32:66.83:0,67,965	0/0:49,0:27:43.63:0,44,659	0/0:25,0:25:72.15:0,72,1487	1/1:26,7:33:24.80:653,25,0	1/1:32,4:36:35.01:858,35,0	0/1:23,0:23:99:195,0,171	0/0:37,0:37:88.78:0,89,1977	0/0:32,0:32:81.25:0,81,1969	0/0:22,0:22:35.55:0,36,1488	0/0:33,0:33:58.06:0,58,1866	0/0:28,0:27:72.18:0,72,1712	0/0:28,0:28:60.10:0,60,1249	0/0:37,0:37:93.24:0,93,2137	0/0:23,0:23:60.60:0,61,1326	0/0:31,0:31:78.22:0,78,1956	0/0:32,0:32:86.98:0,87,1933	0/1:27,0:25:99:316,0,111	0/1:15,0:15:39.90:52,0,40	0/1:19,0:18:12.16:12,0,63	0/0:20,0:20:51.12:0,51,1082	0/0:20,0:20:49.69:0,50,1139	0/0:31,0:31:56.41:0,56,1712	1/1:23,0:23:1.66:403,2,0	0/0:28,0:27:79.08:0,79,1732	0/1:16,0:16:46.08:281,0,46	0/0:11,0:11:30.10:0,30,739
chr10	104486924	.	CAG	C	1044.48	PASS	AB=0.877;AC=13;AF=0.232;AN=56;BaseQRankSum=1.565;DP=817;FS=2.147;HRun=0;HaplotypeScore=147.0229;InbreedingCoeff=0.6365;MQ=56.81;MQ0=7;MQRankSum=-0.588;QD=5.17;ReadPosRankSum=-6.893;VQSLOD=0.3361;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,1:50:99:0,111,1561	0/0:16,0:16:33.07:0,33,452	0/0:39,0:19:21.28:0,21,234	0/0:38,0:20:16.42:0,16,199	0/0:25,0:25:50.89:0,51,685	1/1:22,9:32:11.25:80,11,0	0/1:20,8:31:12.16:54,0,12	1/1:29,0:29:18.40:354,18,0	0/0:35,0:35:66.86:0,67,1068	0/0:39,0:39:87.22:0,87,1341	0/0:22,2:24:17.26:0,17,699	0/0:37,0:37:51.31:0,51,1162	0/0:29,0:28:50.36:0,50,980	0/0:22,0:22:49.31:0,49,604	0/0:35,0:35:75.87:0,76,1165	0/0:20,0:20:48.13:0,48,721	0/0:40,0:40:99:0,102,1315	0/0:35,0:35:92.88:0,93,1209	1/1:27,0:23:2.37:174,2,0	1/1:19,0:19:29.19:223,29,0	1/1:22,0:20:20.49:161,20,0	0/0:24,0:24:26.36:0,26,567	0/0:21,0:21:42.79:0,43,686	0/0:33,0:33:69.79:0,70,1037	0/1:22,1:25:17.73:72,0,18	0/0:36,0:35:96.23:0,96,1273	0/1:17,0:17:35.80:100,0,36	0/0:14,0:14:7.36:0,7,469
chr10	104487561	.	C	CT	1085.48	PASS	AB=0.972;AC=9;AF=0.161;AN=56;BaseQRankSum=-7.195;DP=473;FS=5.718;HRun=10;HaplotypeScore=51.2516;InbreedingCoeff=0.6387;MQ=75.53;MQ0=0;MQRankSum=0.615;QD=11.80;ReadPosRankSum=-0.331;VQSLOD=2.6310;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:52.93:0,53,421	0/0:8,0:8:20.97:0,21,172	0/0:12,0:13:3.44:0,3,66	0/0:10,0:10:14:0,14,109	0/0:26,0:26:56.87:0,57,466	1/1:2,20:22:44.14:454,44,0	1/1:5,12:18:26.23:314,26,0	0/0:24,0:24:50.87:0,51,415	0/0:24,0:24:50.88:0,51,413	0/0:21,0:21:50.86:0,51,408	0/1:12,0:12:3.18:3,0,121	0/0:14,0:14:32.95:0,33,271	0/0:16,0:17:43.82:0,44,340	0/0:16,0:16:13.22:0,13,227	0/0:28,0:28:68.81:0,69,550	0/0:14,0:15:34.99:0,35,277	0/0:16,0:16:41.94:0,42,345	0/0:19,0:19:50.89:0,51,413	0/1:10,1:11:8.03:8,0,148	0/0:18,0:19:49.93:0,50,392	0/0:8,0:8:14.97:0,15,123	0/1:8,0:8:1.73:2,0,105	0/0:18,0:18:47.90:0,48,388	0/0:16,0:16:35.95:0,36,296	1/1:5,16:21:27.86:452,28,0	0/0:18,0:18:32.92:0,33,270	0/0:21,0:21:47.41:0,47,393	0/0:6,0:6:11.96:0,12,98
chr10	104488350	.	AC	A	2297.08	PASS	AB=0.895;AC=13;AF=0.232;AN=56;BaseQRankSum=11.879;DP=590;FS=11.477;HRun=10;HaplotypeScore=76.8287;InbreedingCoeff=0.6294;MQ=78.71;MQ0=2;MQRankSum=-1.505;QD=13.43;ReadPosRankSum=0.765;VQSLOD=2.4401;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,1:38:42.23:0,42,640	0/0:9,0:9:26.97:0,27,281	0/0:42,0:25:11.84:0,12,187	0/0:26,0:19:24.09:0,24,186	0/0:20,3:23:4.95:0,5,456	0/1:14,2:16:13:13,0,317	0/0:22,0:22:1.54:0,2,368	1/1:4,14:18:35.48:306,35,0	0/0:15,2:17:12.99:0,13,333	0/0:17,0:17:16.10:0,16,351	0/0:18,0:18:18.04:0,18,267	0/0:16,0:16:32.93:0,33,317	0/0:11,0:11:22.96:0,23,255	0/0:17,0:17:12.55:0,13,303	0/0:15,0:15:22.28:0,22,402	0/0:15,0:15:39.01:0,39,406	0/0:38,0:38:99:0,99,1051	0/0:7,0:8:4.11:0,4,193	1/1:6,14:20:42.75:303,43,0	1/1:1,30:31:86.59:720,87,0	1/1:4,16:20:51.37:425,51,0	0/0:23,0:23:30.26:0,30,435	0/0:19,0:19:42.08:0,42,444	0/1:26,3:29:53.57:54,0,511	0/0:20,0:20:48.10:0,48,514	0/0:23,0:24:62.97:0,63,659	1/1:2,27:29:75.42:649,75,0	0/1:7,1:8:4.99:5,0,178
chr10	104489472	.	CTCTCTG	C	2419.07	PASS	AB=0.561;AC=9;AF=0.161;AN=56;BaseQRankSum=10.206;DP=780;FS=0.000;HRun=0;HaplotypeScore=157.9280;InbreedingCoeff=0.8570;MQ=57.42;MQ0=21;MQRankSum=-7.878;QD=19.51;ReadPosRankSum=-2.358;VQSLOD=2.9781;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,99,3041	0/0:10,0:10:24.08:0,24,773	0/0:29,0:6:15.05:0,15,372	0/0:54,0:18:15.35:0,15,403	0/0:23,0:23:54.17:0,54,1631	0/0:23,0:23:60.21:0,60,1844	0/0:28,0:28:18.45:0,18,1493	1/1:14,10:22:21.01:280,21,0	0/0:34,0:34:84.26:0,84,2600	0/0:45,0:44:99:0,120,3692	0/0:19,0:18:39.13:0,39,1165	0/0:28,0:28:72.23:0,72,2188	0/0:26,0:26:69.24:0,69,2218	0/0:25,0:25:69.22:0,69,2084	0/0:27,0:27:69.24:0,69,2305	0/0:40,0:40:93.29:0,93,2771	0/0:27,0:27:57.33:0,57,1890	0/0:17,0:17:35.12:0,35,1281	1/1:11,17:22:51.14:977,51,0	1/1:6,11:17:30.10:591,30,0	0/1:7,25:32:26.99:165,0,27	0/0:30,0:30:75.23:0,75,2158	0/0:16,0:16:30.10:0,30,843	0/0:40,0:40:95.82:0,96,2805	0/0:22,0:22:48.11:0,48,1331	0/0:34,0:34:87.29:0,87,2524	1/1:6,17:23:27.09:571,27,0	0/0:15,0:15:39.13:0,39,1130
chr10	104489668	.	CTGTCTGTCTGTCTG	C	562.40	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.886;DP=622;FS=2.056;HRun=0;HaplotypeScore=228.2178;InbreedingCoeff=0.8785;MQ=57.18;MQ0=12;MQRankSum=-3.070;QD=11.25;ReadPosRankSum=-4.159;VQSLOD=1.7998;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:3.38:0,3,2088	0/0:14,0:14:31.61:0,32,908	0/0:27,0:15:34.65:0,35,774	0/0:23,0:13:33.26:0,33,598	0/0:12,0:12:33.11:0,33,1244	1/1:10,0:11:21.05:386,21,0	1/1:4,20:23:6:62,6,0	0/0:37,0:36:97:0,97,2410	0/0:28,0:28:63.20:0,63,2072	0/0:31,0:31:90.21:0,90,2878	0/0:16,0:16:36.12:0,36,1324	0/0:20,0:18:51.16:0,51,1726	0/0:18,0:17:48.14:0,48,1803	0/0:30,0:30:87.30:0,87,3579	0/0:26,0:25:63.14:0,63,2291	0/0:23,0:23:54.16:0,54,1910	0/0:30,0:30:81.21:0,81,3810	0/0:20,0:20:51:0,51,1871	0/0:20,0:18:53.51:0,54,1034	0/0:22,0:22:34.26:0,34,897	0/0:18,0:18:12.01:0,12,388	0/0:25,0:25:60.21:0,60,2077	0/0:14,0:14:33.11:0,33,1468	0/0:34,0:33:66.42:0,66,3221	1/1:14,0:14:11.98:244,12,0	0/0:25,0:25:72.22:0,72,2725	0/0:26,0:25:25.68:0,26,1597	0/0:7,0:6:18.06:0,18,572
chr10	104489682	.	G	GTC	72.25	PASS	AB=0.934;AC=10;AF=0.200;AN=50;BaseQRankSum=3.938;DP=686;FS=0.000;HRun=0;HaplotypeScore=135.2281;InbreedingCoeff=-0.0742;MQ=51.89;MQ0=25;MQRankSum=-0.559;QD=0.34;ReadPosRankSum=-2.820;VQSLOD=1.9042;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:8.51:0,9,143	0/0:16,0:16:5.58:0,6,41	./.	./.	0/0:15,0:15:6.01:0,6,65	1/1:14,0:13:7.42:64,7,0	0/1:28,0:24:0.18:0,0,27	./.	0/1:17,8:29:38.08:38,0,53	0/1:34,0:33:15.68:16,0,65	0/0:22,0:22:8.93:0,9,79	0/0:20,0:21:5.88:0,6,62	0/1:22,0:19:17.94:18,0,74	0/0:31,0:32:19.10:0,19,240	0/0:23,0:25:21.94:0,22,229	0/1:16,7:26:31.77:32,0,130	0/0:35,0:34:29.44:0,29,468	0/0:22,0:26:0.57:0,1,39	0/0:15,0:12:2.84:0,3,14	0/0:9,0:24:8.63:0,9,45	0/1:19,0:18:0.02:0,0,0	0/1:28,0:28:16.16:16,0,55	0/0:17,0:17:0.74:0,1,57	0/0:30,2:33:2.50:0,3,145	0/0:19,0:18:2.27:0,2,8	0/0:27,0:25:2.79:0,3,33	0/0:20,0:23:6.25:0,6,52	0/1:13,0:13:7.10:7,0,44
chr10	104489725	.	TCC	T	368.85	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=1.725;DP=640;FS=0.643;HRun=3;HaplotypeScore=100.8472;InbreedingCoeff=0.7209;MQ=57.77;MQ0=20;MQRankSum=-1.305;QD=5.42;ReadPosRankSum=0.662;VQSLOD=-0.1060;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:64.53:0,65,754	0/0:10,0:10:22.25:0,22,274	0/0:18,0:11:19.35:0,19,240	0/0:28,0:13:19.09:0,19,219	0/0:21,0:19:48.02:0,48,489	1/1:5,11:14:4.71:58,5,0	1/1:22,1:20:0.10:209,0,0	0/0:36,0:35:69.08:0,69,584	0/0:22,1:23:22.04:0,22,274	0/0:49,0:47:99:0,132,1309	0/0:18,0:18:36.06:0,36,464	0/0:19,0:17:38.91:0,39,428	0/0:20,0:17:47.94:0,48,473	0/0:23,1:24:16.25:0,16,670	0/0:29,0:27:61.64:0,62,732	0/0:29,0:27:33.11:0,33,524	0/0:45,0:42:89.18:0,89,1275	0/0:20,0:20:40.35:0,40,439	0/0:14,0:13:31.80:0,32,268	0/0:23,0:22:37.83:0,38,271	0/0:15,0:14:26.78:0,27,196	0/0:25,0:25:36.81:0,37,607	0/0:16,0:16:21.77:0,22,280	0/0:28,0:27:44.44:0,44,581	1/1:15,0:14:16.08:218,16,0	0/0:22,0:20:40.91:0,41,398	0/1:14,0:14:1.44:1,0,140	0/0:12,0:11:12.03:0,12,223
chr10	104490646	.	T	TG	4164.40	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.193;DP=624;FS=7.908;HRun=1;HaplotypeScore=165.4712;InbreedingCoeff=0.9557;MQ=74.94;MQ0=4;MQRankSum=-14.874;QD=31.55;ReadPosRankSum=1.805;VQSLOD=2.6867;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1427	0/0:13,0:13:36.12:0,36,467	0/0:35,0:29:84.06:0,84,1005	0/0:32,0:25:63.17:0,63,789	0/0:41,0:41:99:0,114,1447	1/1:10,2:11:33.11:462,33,0	1/1:18,0:18:44.96:585,45,0	1/1:16,0:15:39.07:511,39,0	0/0:17,0:17:51.17:0,51,662	0/0:24,0:24:66.21:0,66,857	0/0:18,0:18:51.17:0,51,662	0/0:22,0:22:63.18:0,63,801	0/0:29,0:29:87.27:0,87,1113	0/0:21,0:21:60.20:0,60,779	0/0:20,0:20:57.19:0,57,740	0/0:19,0:19:54.16:0,54,689	0/0:37,0:37:99:0,111,1439	0/0:23,0:23:66:0,66,831	1/1:16,0:16:34.83:468,35,0	1/1:12,0:12:35.87:421,36,0	1/1:7,2:9:0.34:48,0,0	0/0:23,0:23:66.21:0,66,856	0/0:20,0:20:54.18:0,54,701	0/0:24,0:24:66.21:0,66,857	1/1:20,0:20:57.06:735,57,0	0/0:29,0:29:78.25:0,78,1013	1/1:27,2:28:72.74:934,73,0	0/0:6,0:6:18.06:0,18,233
chr10	104490647	.	GTCTCT	G	483.87	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=5.315;DP=514;FS=0.000;HRun=0;HaplotypeScore=110.8864;InbreedingCoeff=0.8294;MQ=80.59;MQ0=4;MQRankSum=-3.329;QD=21.99;ReadPosRankSum=-0.885;VQSLOD=2.9129;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,3583	0/0:13,0:13:39.13:0,39,1269	0/0:35,0:29:84.75:0,85,2201	0/0:31,0:24:63.93:0,64,1784	0/0:39,0:39:99:0,114,3695	1/1:2,0:2:5.88:37,6,0	1/1:2,0:2:6.01:62,6,0	1/1:1,0:1:3.01:38,3,0	0/0:17,0:17:51.18:0,51,1625	0/0:23,0:23:69.24:0,69,2154	0/0:17,0:17:51.18:0,51,1686	0/0:21,0:21:63.22:0,63,2056	0/0:30,0:30:90.31:0,90,2720	0/0:22,0:22:63.22:0,63,1944	0/0:20,0:20:60.21:0,60,1949	0/0:19,0:19:54.18:0,54,1720	0/0:37,0:37:99:0,111,3591	0/0:22,0:22:66.23:0,66,2046	1/1:2,0:2:2.99:23,3,0	1/1:0,1:1:3.01:53,3,0	./.	0/0:27,0:27:81.28:0,81,2525	0/0:19,0:19:54.18:0,54,1663	0/0:24,0:24:66.01:0,66,2025	1/1:1,1:2:6:82,6,0	0/0:29,0:29:84.29:0,84,2502	1/1:8,4:12:21.56:352,22,0	0/0:6,0:6:18.06:0,18,470
chr10	104490653	.	GTCTCTCTCTC	G	486.22	PASS	AB=1.000;AC=7;AF=0.146;AN=48;BaseQRankSum=6.273;DP=518;FS=1.143;HRun=0;HaplotypeScore=179.1310;InbreedingCoeff=0.8012;MQ=78.52;MQ0=12;MQRankSum=-2.513;QD=40.52;ReadPosRankSum=0.005;VQSLOD=3.5335;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,5529	0/0:14,0:14:42.14:0,42,1938	0/0:36,0:28:36.35:0,36,2327	0/0:38,0:23:54.59:0,55,2486	0/0:40,0:40:99:0,117,5470	0/1:2,0:2:0.36:1,0,0	./.	./.	0/0:20,0:20:60.19:0,60,2494	0/0:23,0:23:69.23:0,69,3174	0/0:18,0:18:54.19:0,54,2674	0/0:21,0:21:63.20:0,63,3197	0/0:29,0:29:87.27:0,87,3953	0/0:25,0:25:72.22:0,72,3059	0/0:20,0:20:60.19:0,60,3063	0/0:19,0:19:57.20:0,57,2911	0/0:37,0:37:99:0,111,5495	0/0:24,0:24:72.20:0,72,3293	./.	1/1:0,1:1:3.01:77,3,0	./.	0/0:28,0:28:84.29:0,84,3909	0/0:20,0:20:57.16:0,57,2295	0/0:22,0:22:60.19:0,60,2936	1/1:0,1:1:3.01:82,3,0	0/0:27,0:27:81.26:0,81,3589	1/1:4,4:8:18.57:443,19,0	0/0:4,0:4:12.04:0,12,657
chr10	104490675	.	CTG	C	32.21	PASS	AC=6;AF=0.130;AN=46;BaseQRankSum=5.361;DP=479;FS=2.805;HRun=0;HaplotypeScore=83.8703;InbreedingCoeff=0.8312;MQ=62.20;MQ0=20;MQRankSum=-3.130;QD=4.03;ReadPosRankSum=1.197;VQSLOD=2.2448;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,2168	0/0:12,0:12:36.11:0,36,668	0/0:25,0:12:32.87:0,33,474	0/0:43,0:24:33.31:0,33,1037	0/0:36,0:36:99:0,108,2103	./.	./.	./.	0/0:16,0:16:48.15:0,48,910	0/0:21,0:21:63.21:0,63,1240	0/0:16,0:16:48.14:0,48,935	0/0:20,0:20:59.40:0,59,1116	0/0:22,0:22:66.21:0,66,1303	0/0:22,0:22:66.23:0,66,1339	0/0:20,0:20:57.20:0,57,1145	0/0:20,0:20:60.21:0,60,1217	0/0:41,0:41:99:0,117,2310	0/0:24,0:24:72.15:0,72,1327	./.	1/1:0,1:1:2.94:18,3,0	./.	0/0:27,0:27:81.25:0,81,1549	0/0:15,0:15:42.14:0,42,828	0/0:22,0:22:63.01:0,63,1254	1/1:0,1:1:2.99:24,3,0	0/0:25,0:25:75.24:0,75,1449	1/1:2,4:6:11.58:101,12,0	0/0:4,0:4:12.04:0,12,243
chr10	104490680	.	T	TAAA	31.28	PASS	AC=6;AF=0.130;AN=46;BaseQRankSum=4.523;DP=494;FS=0.000;HRun=0;HaplotypeScore=100.2099;InbreedingCoeff=0.8203;MQ=64.95;MQ0=19;MQRankSum=-4.414;QD=3.91;ReadPosRankSum=2.873;VQSLOD=1.7952;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,1971	0/0:13,0:13:39.13:0,39,717	0/0:26,0:14:39.13:0,39,683	0/0:43,0:25:61.88:0,62,1040	0/0:37,0:37:99:0,111,2057	./.	./.	./.	0/0:19,0:19:57.17:0,57,1011	0/0:21,0:21:63.21:0,63,1138	0/0:16,0:16:48.15:0,48,864	0/0:22,0:22:66.20:0,66,1166	0/0:24,0:24:69.21:0,69,1224	0/0:22,0:22:66.23:0,66,1218	0/0:19,0:19:54.19:0,54,1000	0/0:19,0:19:57.20:0,57,1055	0/0:41,0:41:99:0,120,2177	0/0:24,0:24:72.25:0,72,1331	./.	1/1:0,1:1:2.98:22,3,0	./.	0/0:30,0:30:87.28:0,87,1584	0/0:16,0:16:45.12:0,45,776	0/0:22,0:22:63.22:0,63,1175	1/1:0,1:1:2.98:21,3,0	0/0:25,0:25:75.26:0,75,1393	1/1:2,4:6:7.53:97,8,0	0/0:7,0:7:21.07:0,21,366
chr10	104490686	.	CTTGTGT	C	271.01	PASS	AC=6;AF=0.130;AN=46;BaseQRankSum=4.850;DP=493;FS=1.334;HRun=0;HaplotypeScore=135.0793;InbreedingCoeff=0.8542;MQ=73.30;MQ0=16;MQRankSum=-4.697;QD=33.88;ReadPosRankSum=1.527;VQSLOD=3.5674;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,4021	0/0:15,0:15:45.13:0,45,1404	0/0:26,0:16:45.15:0,45,1554	0/0:41,0:26:72.57:0,73,2139	0/0:37,0:37:99:0,111,3691	./.	./.	./.	0/0:19,0:19:57.20:0,57,2078	0/0:22,0:22:66.23:0,66,2276	0/0:17,0:17:51.16:0,51,1730	0/0:22,0:22:66.23:0,66,2480	0/0:23,0:23:69.22:0,69,2366	0/0:25,0:25:75.26:0,75,2745	0/0:18,0:18:54.19:0,54,1896	0/0:20,0:20:60.20:0,60,2056	0/0:39,0:39:99:0,117,4136	0/0:22,0:22:66.23:0,66,2274	./.	1/1:0,1:1:3.01:44,3,0	./.	0/0:31,0:31:93.31:0,93,3130	0/0:15,0:15:42.14:0,42,1476	0/0:20,0:20:60.19:0,60,2069	1/1:0,1:1:3.01:53,3,0	0/0:24,0:24:72.24:0,72,2445	1/1:0,4:6:18.06:290,18,0	0/0:8,0:8:24.08:0,24,902
chr10	104490693	.	CT	C	98.42	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=6.417;DP=502;FS=1.003;HRun=1;HaplotypeScore=69.0714;InbreedingCoeff=0.8454;MQ=79.40;MQ0=15;MQRankSum=-3.342;QD=4.47;ReadPosRankSum=-1.528;VQSLOD=-0.1937;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1812	0/0:13,0:13:39.13:0,39,623	0/0:27,0:18:51.17:0,51,816	0/0:42,0:28:79.53:0,80,1151	0/0:37,0:37:99:0,105,1609	1/1:0,1:1:3.01:37,3,0	1/1:0,5:5:5.81:33,6,0	1/1:0,1:1:2.88:15,3,0	0/0:18,0:18:54.18:0,54,863	0/0:21,0:21:60.20:0,60,960	0/0:16,0:16:48.16:0,48,764	0/0:23,0:23:69.24:0,69,1101	0/0:22,0:22:66.23:0,66,1052	0/0:26,0:26:78.27:0,78,1244	0/0:19,0:19:57.19:0,57,908	0/0:19,0:19:57.19:0,57,911	0/0:38,0:38:99:0,114,1792	0/0:20,0:20:60.20:0,60,959	./.	1/1:3,0:4:5.70:31,6,0	./.	0/0:28,0:28:84.27:0,84,1319	0/0:17,0:17:45.14:0,45,696	0/0:21,0:21:63.17:0,63,974	1/1:3,0:4:5.81:34,6,0	0/0:23,0:23:69.23:0,69,1082	1/1:3,0:7:19.27:100,19,0	0/0:8,0:8:24.08:0,24,384
chr10	104490694	.	T	TC	372.84	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=6.481;DP=504;FS=1.004;HRun=1;HaplotypeScore=69.0387;InbreedingCoeff=0.8498;MQ=79.36;MQ0=13;MQRankSum=-2.394;QD=14.91;ReadPosRankSum=-1.932;VQSLOD=2.6271;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1422	0/0:13,0:13:39.11:0,39,492	0/0:26,0:18:51.15:0,51,663	0/0:41,0:28:78.40:0,78,955	0/0:34,0:34:96.31:0,96,1246	1/1:1,0:1:3.01:37,3,0	1/1:6,0:6:6.02:83,6,0	1/1:2,0:2:3.01:42,3,0	0/0:18,0:18:54.18:0,54,701	0/0:22,0:22:60.20:0,60,779	0/0:16,0:16:48.14:0,48,608	0/0:24,0:24:69.22:0,69,895	0/0:22,0:22:63.20:0,63,818	0/0:27,0:27:78.25:0,78,1010	0/0:19,0:19:57.17:0,57,725	0/0:19,0:19:57.19:0,57,739	0/0:38,0:38:99:0,111,1409	0/0:20,0:20:60.20:0,60,779	./.	1/1:2,3:5:6.01:72,6,0	./.	0/0:28,0:28:81.25:0,81,1037	0/0:18,0:18:45.12:0,45,556	0/0:20,0:20:60.19:0,60,776	1/1:3,1:4:6.02:75,6,0	0/0:22,0:22:66.21:0,66,857	1/1:7,0:7:20.84:217,21,0	0/0:8,0:8:24.08:0,24,312
chr10	104492305	.	AATC	A	814.17	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=4.261;DP=400;FS=1.490;HRun=0;HaplotypeScore=57.1817;InbreedingCoeff=0.8263;MQ=83.44;MQ0=0;MQRankSum=-0.165;QD=8.48;ReadPosRankSum=-3.132;VQSLOD=1.9425;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,1741	0/0:2,0:2:3:0,3,28	0/0:19,0:19:8.96:0,9,275	0/0:13,0:13:18.06:0,18,335	0/0:13,0:13:30.10:0,30,540	1/1:10,0:10:2.99:24,3,0	1/1:6,10:16:23.82:234,24,0	1/1:14,0:14:32.76:374,33,0	0/0:10,0:10:15.05:0,15,252	0/0:18,0:18:48.16:0,48,874	0/0:5,0:5:9.03:0,9,158	0/0:7,0:7:21.07:0,21,349	0/0:9,0:9:15.05:0,15,272	0/0:11,0:11:15.05:0,15,271	0/0:16,0:16:41.99:0,42,684	0/0:14,0:14:39.13:0,39,729	0/0:38,0:38:96.28:0,96,1680	0/0:24,0:24:66.22:0,66,1316	1/1:14,0:14:18.01:229,18,0	1/1:8,0:8:8.92:75,9,0	1/1:26,0:26:5.95:42,6,0	0/0:7,0:7:15.05:0,15,247	0/0:13,0:13:21.07:0,21,357	0/0:27,0:27:42.11:0,42,598	./.	0/0:10,0:10:21.07:0,21,380	1/1:8,0:8:2.07:7,2,0	0/0:5,0:5:15.05:0,15,301
chr10	104492314	.	CAT	C	1113.43	PASS	AB=0.533;AC=13;AF=0.241;AN=54;BaseQRankSum=3.718;DP=360;FS=0.678;HRun=0;HaplotypeScore=44.6693;InbreedingCoeff=0.7874;MQ=70.11;MQ0=0;MQRankSum=0.279;QD=13.75;ReadPosRankSum=-2.165;VQSLOD=2.9609;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1626	0/0:2,0:2:2.22:0,2,7	0/0:10,0:10:20.22:0,20,330	0/0:8,0:8:18.05:0,18,312	0/0:12,0:12:30.10:0,30,486	1/1:0,8:8:3.01:49,3,0	1/1:11,5:16:27.01:325,27,0	1/1:8,3:11:33.11:455,33,0	0/0:8,0:8:15.05:0,15,241	0/0:20,0:20:53.33:0,53,840	0/0:4,0:4:9.03:0,9,147	0/0:7,0:7:21.07:0,21,313	0/0:10,0:10:15.05:0,15,250	0/0:12,0:12:15.05:0,15,224	0/0:17,0:17:40:0,40,615	0/0:14,0:14:39.13:0,39,646	0/0:35,0:35:99:0,99,1533	0/0:24,0:24:66.22:0,66,1126	0/1:1,7:8:2.07:225,0,2	1/1:0,7:8:9.50:116,10,0	1/1:0,20:22:6.02:71,6,0	0/0:5,0:5:15.05:0,15,231	0/0:10,0:10:21.07:0,21,320	0/0:26,0:26:14.82:0,15,497	./.	0/0:8,0:8:21.04:0,21,356	1/1:2,0:8:5.75:40,6,0	0/0:5,0:5:15.05:0,15,262
chr10	104492975	.	AC	A	4133.53	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.870;DP=686;FS=2.819;HRun=1;HaplotypeScore=65.3719;InbreedingCoeff=0.9998;MQ=69.11;MQ0=0;MQRankSum=-2.135;QD=38.27;ReadPosRankSum=0.890;VQSLOD=4.2985;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1574	0/0:10,0:10:30.10:0,30,475	0/0:23,0:23:40.59:0,41,916	0/0:26,0:26:38.48:0,38,1041	0/0:26,0:26:78.25:0,78,1224	0/0:18,0:18:54.18:0,54,860	0/0:31,0:31:93.30:0,93,1445	1/1:0,24:24:72.23:988,72,0	0/0:25,0:25:75.26:0,75,1193	0/0:37,0:37:99:0,111,1774	0/0:36,0:36:99:0,108,1690	0/0:23,0:23:69.24:0,69,1103	0/0:17,0:17:51.17:0,51,809	0/0:40,0:40:99:0,120,1890	0/0:24,0:24:72.23:0,72,1128	0/0:19,0:19:57.19:0,57,909	0/0:41,0:41:99:0,123,1949	0/0:26,0:26:75.26:0,75,1191	1/1:0,11:11:33.09:443,33,0	1/1:0,24:24:72.20:985,72,0	1/1:0,22:22:54.18:755,54,0	0/0:26,0:26:75.23:0,75,1168	0/0:17,0:17:51.17:0,51,809	0/0:15,0:15:45.15:0,45,719	0/0:22,0:22:66.19:0,66,1003	0/0:25,0:25:75.26:0,75,1197	1/1:0,27:27:69.23:963,69,0	0/0:17,0:17:51.11:0,51,741
chr10	104493664	.	A	ATC	8310.34	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.089;DP=720;FS=3.918;HRun=0;HaplotypeScore=101.0507;InbreedingCoeff=0.9705;MQ=91.35;MQ0=0;MQRankSum=-3.982;QD=48.60;ReadPosRankSum=-0.969;VQSLOD=5.5244;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,99,1394	0/0:10,0:10:30.09:0,30,422	0/0:27,0:27:46.47:0,46,841	0/0:31,0:31:87.12:0,87,1239	0/0:9,0:9:18.04:0,18,245	0/0:18,0:18:48.15:0,48,687	0/0:31,0:31:90.29:0,90,1304	1/1:5,27:32:93.29:1662,93,0	0/0:44,0:44:99:0,126,1851	0/0:18,0:18:48.16:0,48,691	0/0:3,0:3:9.01:0,9,112	0/0:36,0:36:99:0,108,1587	0/0:33,0:33:93.23:0,93,1279	0/0:38,0:38:99:0,105,1507	0/0:30,0:30:87.27:0,87,1240	0/0:19,0:19:57.19:0,57,839	0/0:36,0:36:93.24:0,93,1286	0/0:22,0:22:66.20:0,66,943	1/1:3,21:25:72.25:1318,72,0	1/1:0,12:12:24.08:449,24,0	1/1:3,67:70:99:3315,178,0	0/0:9,0:9:24.07:0,24,334	0/0:3,0:3:9.03:0,9,133	0/0:42,0:42:99:0,117,1663	0/0:13,0:13:36.10:0,36,509	0/0:19,0:19:54.17:0,54,777	1/1:5,27:32:87.25:1567,87,0	0/0:17,0:17:48.14:0,48,686
chr10	104493913	.	AATAT	A	768.87	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=1.649;DP=307;FS=4.874;HRun=0;HaplotypeScore=67.0840;InbreedingCoeff=0.6321;MQ=82.39;MQ0=5;MQRankSum=-0.354;QD=14.51;ReadPosRankSum=3.062;VQSLOD=2.4000;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:39.09:0,39,858	0/0:3,0:3:9.03:0,9,231	0/0:9,0:8:12.71:0,13,63	0/1:18,0:13:4.66:5,0,36	0/0:9,0:9:24.07:0,24,482	1/1:2,15:17:30.10:530,30,0	1/1:0,4:4:9.03:156,9,0	0/0:30,0:30:71.04:0,71,950	0/0:7,0:7:12.04:0,12,253	0/0:6,0:6:9.02:0,9,182	0/0:5,0:5:12.03:0,12,202	0/0:3,0:3:6.02:0,6,126	0/0:8,0:8:18.06:0,18,435	0/0:3,0:3:3.01:0,3,77	0/0:8,0:8:15.05:0,15,385	0/0:3,0:3:9.03:0,9,201	0/0:27,0:27:63.17:0,63,1460	0/0:30,0:29:78.21:0,78,1842	0/0:19,0:16:48.11:0,48,701	0/0:9,0:9:23.57:0,24,357	0/0:7,0:7:16.76:0,17,218	0/0:3,0:3:6.02:0,6,149	0/0:7,0:7:21.07:0,21,497	0/0:4,0:4:3.01:0,3,77	1/1:2,12:14:12.04:212,12,0	0/0:8,0:8:18.05:0,18,354	0/0:16,0:16:35.88:0,36,556	0/0:9,0:8:24.08:0,24,616
chr10	104494134	.	G	GT	1826.86	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.731;DP=641;FS=5.323;HRun=5;HaplotypeScore=72.4130;InbreedingCoeff=0.9981;MQ=67.87;MQ0=2;MQRankSum=-0.492;QD=31.50;ReadPosRankSum=0.004;VQSLOD=4.1921;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,1579	0/0:10,0:10:27.04:0,27,280	0/0:26,0:23:60.14:0,60,637	0/0:22,0:21:63.12:0,63,656	0/0:14,0:14:42.07:0,42,434	1/1:1,16:17:48.16:632,48,0	1/1:2,24:26:60.19:786,60,0	0/0:38,0:38:93.13:0,93,983	0/0:24,0:24:63.16:0,63,677	0/0:14,0:14:42.07:0,42,434	0/0:8,0:8:21.05:0,21,226	0/0:19,0:19:57.12:0,57,604	0/0:15,0:15:45.11:0,45,483	0/0:13,0:13:36.09:0,36,387	0/0:13,0:13:39.10:0,39,419	0/0:26,0:26:75.16:0,75,796	0/0:39,0:39:96.24:0,96,1030	0/0:29,0:29:87.22:0,87,934	0/0:24,0:24:57.12:0,57,602	0/0:18,0:18:48.10:0,48,506	0/0:36,0:36:99:0,99,1063	0/0:14,0:14:42.11:0,42,451	0/0:21,0:21:63.16:0,63,676	0/0:36,0:36:99:0,102,1095	1/1:1,14:15:42.14:552,42,0	0/0:29,0:29:78.20:0,78,838	0/0:27,0:27:78.20:0,78,838	0/0:18,0:18:54.14:0,54,579
chr10	104495411	.	CA	C	901.41	PASS	AB=0.750;AC=16;AF=0.286;AN=56;BaseQRankSum=8.536;DP=392;FS=4.060;HRun=11;HaplotypeScore=57.8997;InbreedingCoeff=0.7539;MQ=61.09;MQ0=6;MQRankSum=-3.890;QD=8.35;ReadPosRankSum=1.492;VQSLOD=2.1518;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:33:71.23:0,71,713	0/1:3,1:4:12.50:13,0,84	0/0:20,0:4:3:0,3,27	0/0:14,0:3:0.47:0,0,1	0/0:12,0:13:23.84:0,24,218	1/1:2,0:10:14.26:42,14,0	1/1:2,0:12:19.28:70,19,0	1/1:4,19:24:49.86:400,50,0	0/0:11,0:11:26.85:0,27,250	0/0:14,1:15:11.18:0,11,307	0/0:16,0:17:38.93:0,39,393	0/0:9,0:9:21.02:0,21,208	0/0:9,0:9:24.03:0,24,234	0/0:9,0:9:24:0,24,230	0/0:11,0:11:24.04:0,24,243	0/0:8,0:8:15.04:0,15,160	0/0:26,2:28:32.46:0,32,529	0/0:24,1:25:41.45:0,41,609	0/1:8,6:14:28.21:102,0,28	1/1:4,6:10:17.96:148,18,0	1/1:2,4:6:11.99:98,12,0	0/0:8,0:8:15.02:0,15,152	0/0:10,0:10:24.06:0,24,256	0/0:12,1:13:17.76:0,18,336	1/1:5,0:17:18.49:56,18,0	0/0:16,0:15:27.07:0,27,286	1/1:5,5:9:20.94:167,21,0	0/0:14,0:14:36.55:0,37,377
chr10	104495425	.	C	CT	1031.78	PASS	AB=0.952;AC=9;AF=0.161;AN=56;BaseQRankSum=7.160;DP=422;FS=0.000;HRun=8;HaplotypeScore=60.9355;InbreedingCoeff=0.7489;MQ=55.12;MQ0=10;MQRankSum=-5.339;QD=9.64;ReadPosRankSum=-0.662;VQSLOD=1.3376;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:63.59:0,64,653	0/1:5,1:6:19.37:19,0,95	0/1:36,0:3:0:0,0,0	0/1:18,0:3:0:0,0,0	0/0:14,0:14:38.90:0,39,338	1/1:3,8:13:30.07:329,30,0	1/1:3,11:14:26.04:340,26,0	0/0:31,0:30:57.68:0,58,498	0/0:12,0:12:21:0,21,191	0/0:13,0:13:33.01:0,33,301	0/0:16,0:16:32.87:0,33,284	0/0:9,0:9:23.99:0,24,214	0/0:11,0:11:29.91:0,30,274	0/0:10,0:10:24:0,24,216	0/0:6,0:6:18:0,18,160	0/0:8,0:8:20.99:0,21,185	0/0:24,0:24:54.01:0,54,491	0/0:26,0:26:48:0,48,438	0/0:16,0:15:14.91:0,15,223	0/0:11,0:11:23.66:0,24,180	0/0:6,0:6:8.90:0,9,68	0/0:7,0:7:21.01:0,21,192	0/0:10,0:10:27.01:0,27,245	0/0:14,1:15:24.46:0,24,308	1/1:7,13:18:45.46:489,45,0	0/0:16,0:15:36:0,36,327	0/0:13,0:12:17.09:0,17,118	0/0:9,0:9:12.48:0,12,111
chr10	104495434	.	C	CT	766.11	PASS	AB=0.925;AC=21;AF=0.375;AN=56;BaseQRankSum=9.774;DP=423;FS=4.265;HRun=12;HaplotypeScore=57.4096;InbreedingCoeff=0.5168;MQ=51.84;MQ0=11;MQRankSum=-6.335;QD=3.37;ReadPosRankSum=0.031;VQSLOD=-0.3766;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,3:31:11.80:0,12,346	0/1:5,1:6:14.02:14,0,72	0/1:33,2:1:0:0,0,0	0/1:18,0:3:0:0,0,0	0/1:15,2:17:17.79:18,0,203	1/1:9,3:13:18.89:150,19,0	0/1:10,4:14:21.04:92,0,21	1/1:26,0:30:34.48:147,34,0	0/0:10,0:10:20.82:0,21,138	0/0:11,0:11:20.81:0,21,150	0/1:16,0:16:7.28:7,0,109	0/0:9,0:9:4.90:0,5,131	0/0:11,0:11:20.72:0,21,151	0/0:8,0:9:19.72:0,20,128	0/0:8,0:8:14.91:0,15,109	0/1:9,0:9:14.25:14,0,72	0/0:25,0:25:42.76:0,43,310	0/0:22,0:22:49.27:0,49,340	1/1:16,0:17:14.10:75,14,0	1/1:6,0:12:8.88:43,9,0	1/1:2,0:5:8.67:49,9,0	0/0:8,0:9:19.91:0,20,135	0/0:11,0:12:13.04:0,13,163	0/0:17,0:17:14.25:0,14,153	1/1:11,9:18:18.84:283,19,0	0/0:16,0:16:16.76:0,17,244	1/1:5,0:11:12.28:60,12,0	0/0:5,0:5:10.72:0,11,67
chr10	104497026	.	TC	T	2058.85	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.867;DP=636;FS=5.937;HRun=8;HaplotypeScore=65.7688;InbreedingCoeff=0.9997;MQ=82.52;MQ0=0;MQRankSum=-2.386;QD=23.40;ReadPosRankSum=1.641;VQSLOD=4.4926;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,108,1269	0/0:11,0:11:33.10:0,33,398	0/0:25,0:25:38.39:0,38,538	0/0:21,0:20:33.69:0,34,360	0/0:22,0:22:66.19:0,66,786	1/1:4,19:23:51.08:493,51,0	1/1:4,31:35:90.14:869,90,0	0/0:21,0:21:57.17:0,57,677	0/0:28,0:28:75.23:0,75,906	0/0:25,0:25:72.21:0,72,860	0/0:13,0:13:39.11:0,39,460	0/0:20,0:20:57.16:0,57,676	0/0:22,0:22:51.16:0,51,616	0/0:13,0:14:41.99:0,42,485	0/0:27,0:27:63.18:0,63,749	0/0:20,0:20:57.17:0,57,678	0/0:25,0:25:69.21:0,69,833	0/0:21,0:21:57.17:0,57,679	0/0:21,0:21:60.17:0,60,702	0/0:14,0:14:42.12:0,42,497	0/0:28,0:28:72.20:0,72,846	0/0:25,0:25:69.16:0,69,787	0/0:21,0:21:57.15:0,57,677	0/0:24,0:24:63.14:0,63,735	1/1:0,30:30:87.14:840,87,0	0/0:18,0:18:51.16:0,51,616	0/0:26,0:26:66.15:0,66,761	0/0:11,0:11:33.10:0,33,399
chr10	104498359	.	T	TAAAAAG	5069.51	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.720;DP=593;FS=6.236;HRun=0;HaplotypeScore=113.4728;InbreedingCoeff=0.9757;MQ=61.17;MQ0=0;MQRankSum=-11.514;QD=79.21;ReadPosRankSum=-1.185;VQSLOD=5.7052;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.31:0,90,1940	0/0:9,0:9:21.07:0,21,457	0/0:12,0:10:9.03:0,9,196	0/0:21,0:17:33.03:0,33,662	0/0:31,0:31:75.26:0,75,1632	1/1:3,19:23:63.22:2114,63,0	1/1:3,6:9:21.07:662,21,0	0/0:34,0:34:78.26:0,78,1638	0/0:15,0:15:39.13:0,39,849	0/0:32,0:32:84.29:0,84,1814	0/0:28,0:28:72.25:0,72,1566	0/0:24,0:24:66.23:0,66,1423	0/0:15,0:15:39.13:0,39,847	0/0:17,0:17:42.05:0,42,914	0/0:24,0:24:54.17:0,54,1135	0/0:18,0:18:48.16:0,48,1033	0/0:21,0:21:51.16:0,51,1043	0/0:18,0:18:48.14:0,48,1001	0/0:18,0:18:48.12:0,48,925	0/0:18,0:18:48.16:0,48,1045	0/0:13,0:13:30.09:0,30,612	0/0:16,0:16:48.15:0,48,1001	0/0:19,0:19:57.20:0,57,1240	0/0:19,0:19:51.17:0,51,1090	1/1:8,24:31:69.23:2293,69,0	0/0:26,0:26:72.25:0,72,1567	0/0:39,0:39:99:0,102,2090	0/0:10,0:10:24.08:0,24,522
chr10	104499082	.	AG	A	2075.40	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=8.768;DP=518;FS=2.622;HRun=9;HaplotypeScore=56.5372;InbreedingCoeff=0.8812;MQ=74.19;MQ0=0;MQRankSum=-0.818;QD=16.60;ReadPosRankSum=-0.421;VQSLOD=3.6059;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,1:41:83.93:0,84,1200	0/0:9,0:9:27.08:0,27,312	0/0:16,0:15:23.19:0,23,200	0/1:14,0:13:36.81:37,0,106	0/0:17,0:17:42.06:0,42,458	0/0:20,0:20:48.14:0,48,554	0/0:9,0:9:15.04:0,15,173	1/1:8,16:24:41.93:380,42,0	0/0:25,0:25:66.18:0,66,752	0/0:19,0:19:51.15:0,51,582	0/0:14,0:14:39.11:0,39,440	0/0:9,0:9:24.06:0,24,268	0/0:8,0:8:24.06:0,24,266	0/0:15,0:15:39.08:0,39,419	0/0:14,0:14:42.12:0,42,485	0/0:13,0:13:36.11:0,36,415	0/0:35,0:35:93.26:0,93,1064	0/0:23,0:23:63.17:0,63,715	1/1:5,17:22:47.11:437,47,0	1/1:3,8:11:24.01:220,24,0	1/1:1,20:21:51.02:467,51,0	0/0:14,0:14:42.11:0,42,468	0/0:21,0:21:54.16:0,54,616	0/0:22,0:22:66.20:0,66,762	0/0:19,0:19:45.13:0,45,515	0/0:19,0:19:54.14:0,54,606	1/1:4,29:33:78.03:714,78,0	0/0:11,0:11:24.07:0,24,277
chr10	104501003	.	G	GGT	8334.21	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-2.025;DP=654;FS=14.283;HRun=0;HaplotypeScore=82.3007;InbreedingCoeff=0.9900;MQ=78.31;MQ0=0;MQRankSum=-3.810;QD=45.05;ReadPosRankSum=-1.479;VQSLOD=4.7859;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,151,2207	0/0:8,0:8:24.07:0,24,337	0/0:29,0:28:75.25:0,75,1096	0/0:25,0:25:66.22:0,66,961	0/0:23,0:23:63.14:0,63,898	1/1:0,22:22:66.23:1236,66,0	1/1:1,28:29:63.22:1180,63,0	1/1:3,16:20:57.17:995,57,0	0/0:17,0:17:51.17:0,51,750	0/0:24,0:24:72.22:0,72,1018	0/0:21,0:21:54.16:0,54,795	0/0:23,0:23:63.21:0,63,927	0/0:23,0:23:66.22:0,66,970	0/0:23,0:23:66.22:0,66,972	0/0:26,0:26:75.22:0,75,1064	0/0:24,0:24:66.22:0,66,972	0/0:28,0:28:84.28:0,84,1236	0/0:22,0:22:66.21:0,66,951	1/1:5,18:23:63.14:1076,63,0	1/1:1,20:21:54.18:989,54,0	1/1:3,29:32:69.24:1292,69,0	0/0:29,0:29:84.27:0,84,1218	0/0:18,0:18:48.11:0,48,681	0/0:24,0:24:66.22:0,66,972	1/1:0,17:19:48.16:893,48,0	0/0:28,0:28:78.23:0,78,1075	1/1:1,16:17:35.92:674,36,0	0/0:3,0:3:9.03:0,9,132
chr10	104501662	.	A	AGATG	5661.21	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.618;DP=690;FS=3.345;HRun=0;HaplotypeScore=111.5320;InbreedingCoeff=0.9759;MQ=75.21;MQ0=0;MQRankSum=-1.309;QD=41.32;ReadPosRankSum=-1.819;VQSLOD=4.5794;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:39.13:0,39,649	0/0:11,0:11:30.10:0,30,506	0/0:29,0:27:43.91:0,44,670	0/0:28,0:28:37.07:0,37,601	0/0:27,0:27:66.23:0,66,1111	0/0:19,0:19:45.15:0,45,751	0/0:24,0:24:63.20:0,63,1028	1/1:8,19:28:60.17:1235,60,0	0/0:41,0:41:99:0,108,1744	0/0:25,0:25:57.20:0,57,961	0/0:21,0:21:45.13:0,45,711	0/0:19,0:19:42.12:0,42,651	0/0:22,0:22:60.21:0,60,1013	0/0:23,0:23:57.17:0,57,900	0/0:29,0:29:66.23:0,66,1101	0/0:19,0:19:48.16:0,48,808	0/0:25,0:25:57.19:0,57,956	0/0:20,0:20:6.25:0,6,690	1/1:15,11:27:36.11:792,36,0	1/1:4,20:24:57.20:1412,57,0	1/1:1,24:26:42.14:1030,42,0	0/0:23,0:23:60.17:0,60,978	0/0:23,0:23:57.17:0,57,913	0/0:29,0:29:66.23:0,66,1094	0/0:30,0:30:75.26:0,75,1259	0/0:28,0:28:72.25:0,72,1211	1/1:5,25:32:48.09:1193,48,0	0/0:16,0:16:21.07:0,21,354
chr10	104502818	.	T	TGCCCTT	617.14	PASS	AB=0.657;AC=20;AF=0.909;AN=22;BaseQRankSum=-1.508;DP=23;FS=9.031;HRun=0;HaplotypeScore=11.2112;InbreedingCoeff=-0.2651;MQ=136.21;MQ0=0;MQRankSum=-1.667;QD=36.30;ReadPosRankSum=0.397;VQSLOD=1.1782;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:1:3:25,3,0	./.	0/1:1,1:3:27.44:151,0,27	0/1:3,0:4:2.61:157,0,3	./.	./.	./.	1/1:1,0:1:3:27,3,0	./.	1/1:1,0:1:3:28,3,0	1/1:1,0:1:3:26,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:1,0:1:3.01:60,3,0	1/1:1,0:1:3.01:76,3,0	./.	1/1:1,0:1:3.01:54,3,0	./.	./.	1/1:1,0:1:3.01:46,3,0	1/1:1,0:1:3.01:48,3,0
chr10	104517078	.	CACGTGT	C	94.66	PASS	AB=0.890;AC=4;AF=0.071;AN=56;BaseQRankSum=3.838;DP=448;FS=1.277;HRun=0;HaplotypeScore=107.7513;InbreedingCoeff=0.0849;MQ=58.45;MQ0=5;MQRankSum=-3.730;QD=2.63;ReadPosRankSum=-3.317;VQSLOD=1.3212;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.19:0,66,2124	0/0:6,0:6:9.50:0,9,353	0/0:8,0:2:4.26:0,4,51	0/0:11,0:5:4.56:0,5,144	0/0:13,0:13:20.43:0,20,627	0/0:9,0:9:15.05:0,15,506	0/0:19,0:18:6.28:0,6,651	0/1:13,3:15:96.22:96,0,320	0/0:19,0:19:48.16:0,48,1540	0/0:19,0:19:51.17:0,51,1866	0/0:9,0:9:21.07:0,21,775	0/0:20,0:20:41.76:0,42,1392	0/0:13,0:13:33.07:0,33,967	0/0:16,0:15:33.11:0,33,1119	0/0:11,0:11:24.08:0,24,862	0/0:18,0:18:45.15:0,45,1638	0/0:26,0:26:71.58:0,72,2365	0/0:29,0:29:84.27:0,84,2899	0/1:14,1:14:86.23:86,0,702	0/0:6,0:6:2.97:0,3,20	0/0:30,0:30:32.68:0,33,732	0/0:12,0:12:30.10:0,30,1051	0/0:11,0:11:24.08:0,24,785	0/0:37,0:37:99:0,102,3487	0/0:11,0:10:3.01:0,3,109	0/0:24,0:24:71.05:0,71,2359	1/1:4,1:5:0.47:1,0,0	0/0:11,0:9:24.08:0,24,875
chr10	104517084	.	T	TGCGCGCGCGC	954.87	PASS	AB=1.000;AC=5;AF=0.093;AN=54;BaseQRankSum=2.168;DP=457;FS=5.982;HRun=0;HaplotypeScore=143.4265;InbreedingCoeff=0.5865;MQ=56.69;MQ0=8;MQRankSum=-5.927;QD=19.89;ReadPosRankSum=-4.255;VQSLOD=0.9665;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:65:0,65,1831	0/0:6,0:6:9.50:0,10,172	./.	0/0:10,0:5:1.74:0,2,27	0/0:11,0:11:18.53:0,19,545	0/0:11,0:10:6.47:0,6,71	0/1:17,0:15:39.72:40,0,51	1/1:16,0:14:21.22:208,21,0	0/0:19,0:19:48.16:0,48,1386	0/0:23,0:23:51.17:0,51,1513	0/0:9,0:9:24.07:0,24,695	0/0:19,0:19:42.76:0,43,1175	0/0:11,0:11:27.09:0,27,812	0/0:17,0:15:30.10:0,30,909	0/0:11,0:11:24.07:0,24,677	0/0:17,0:17:45.15:0,45,1282	0/0:30,0:30:74.44:0,74,1976	0/0:31,0:31:79.78:0,80,2071	1/1:7,7:14:36.12:831,36,0	0/0:5,0:5:0:0,0,0	0/0:18,7:27:0.47:0,0,1	0/0:13,0:13:33.05:0,33,853	0/0:11,0:11:24.08:0,24,680	0/0:40,0:40:99:0,99,2815	0/0:11,0:10:3.46:0,3,24	0/0:24,0:24:59.01:0,59,1681	0/0:4,0:4:0.89:0,1,2	0/0:14,0:12:30.07:0,30,708
chr10	104517557	.	TGCC	T	3863.38	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.068;DP=493;FS=18.290;HRun=0;HaplotypeScore=82.7905;InbreedingCoeff=0.9942;MQ=91.38;MQ0=0;MQRankSum=-3.897;QD=50.83;ReadPosRankSum=0.421;VQSLOD=4.3954;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,2880	0/0:5,0:5:15.05:0,15,316	0/0:13,0:13:39.13:0,39,943	0/0:28,0:28:80.33:0,80,1813	0/0:9,0:8:24.08:0,24,592	0/0:19,0:19:57.20:0,57,1377	0/0:23,0:23:66.23:0,66,1625	1/1:0,14:15:45.14:790,45,0	0/0:25,0:25:72.25:0,72,1773	0/0:19,0:19:57.20:0,57,1346	0/0:7,0:7:21.07:0,21,516	0/0:12,0:12:36.12:0,36,828	0/0:11,0:11:33.11:0,33,813	0/0:16,0:16:48.16:0,48,1183	0/0:8,0:8:24.08:0,24,594	0/0:15,0:15:45.15:0,45,1110	0/0:39,0:39:99:0,114,2752	0/0:24,0:24:69.15:0,69,1544	1/1:0,18:18:54.12:890,54,0	1/1:0,12:12:33.11:598,33,0	1/1:0,15:15:45.11:803,45,0	0/0:16,0:16:48.16:0,48,1174	0/0:15,0:15:42.14:0,42,974	0/0:29,0:29:87.30:0,87,2143	0/0:15,0:15:45.15:0,45,1109	0/0:15,0:15:45.15:0,45,1110	1/1:0,16:16:42.14:783,42,0	0/0:15,0:15:45.15:0,45,1108
chr10	104517899	.	A	ACGTG	1786.63	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=3.436;DP=655;FS=3.297;HRun=0;HaplotypeScore=127.1737;InbreedingCoeff=0.9254;MQ=59.63;MQ0=6;MQRankSum=-7.194;QD=14.41;ReadPosRankSum=-4.033;VQSLOD=2.7159;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:60.19:0,60,986	0/0:8,0:8:15.05:0,15,259	0/0:42,0:22:24.88:0,25,361	0/0:37,0:18:17.98:0,18,253	0/0:14,0:13:27.09:0,27,459	0/0:23,0:23:26.02:0,26,419	0/0:43,0:43:59.57:0,60,961	1/1:12,9:23:30.01:483,30,0	0/0:30,0:30:63.21:0,63,1044	0/0:15,0:15:33.09:0,33,486	0/0:4,0:4:9.03:0,9,155	0/0:28,0:28:75.24:0,75,1246	0/0:18,0:18:30.07:0,30,459	0/0:23,0:23:51.17:0,51,857	0/0:18,0:18:45.15:0,45,766	0/0:15,0:15:27.09:0,27,458	0/0:33,0:33:84.29:0,84,1429	0/0:29,0:28:53.21:0,53,876	1/1:12,8:21:39.02:717,39,0	1/1:5,5:11:3.48:53,3,0	1/1:23,35:58:15.36:337,15,0	0/0:23,0:23:51.15:0,51,846	0/0:8,0:8:21.07:0,21,358	0/0:37,0:37:72.22:0,72,1197	0/0:10,0:10:11.90:0,12,207	0/0:30,0:30:69.21:0,69,1108	1/1:4,6:10:15.05:362,15,0	0/0:16,0:16:33.10:0,33,542
chr10	104517955	.	G	GTGTGTGTT	3513.13	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=3.223;DP=648;FS=8.362;HRun=0;HaplotypeScore=175.8690;InbreedingCoeff=0.9785;MQ=57.69;MQ0=10;MQRankSum=-8.438;QD=16.34;ReadPosRankSum=-5.997;VQSLOD=-0.0864;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:71.91:0,72,1118	0/0:8,0:8:14.24:0,14,247	0/0:30,0:13:28.41:0,28,286	0/0:24,0:12:33.05:0,33,337	0/0:13,0:12:26.93:0,27,469	1/1:5,10:21:10.83:204,11,0	1/1:12,30:56:24.42:385,24,0	1/1:22,0:22:52.99:499,53,0	0/0:30,0:30:72.98:0,73,1271	0/0:23,0:23:38.51:0,39,722	0/0:6,0:6:12.01:0,12,144	0/0:29,0:29:78.06:0,78,1316	0/0:18,0:18:41.67:0,42,495	0/0:15,0:15:32.72:0,33,538	0/0:15,0:15:35.64:0,36,634	0/0:11,0:11:30.05:0,30,527	0/0:48,0:47:99:0,118,2146	0/0:23,0:23:40.57:0,41,892	1/1:18,0:20:44.89:558,45,0	1/1:13,0:13:18.27:208,18,0	1/1:50,0:49:87.69:857,88,0	0/0:17,0:17:38.20:0,38,609	0/0:8,0:8:17.97:0,18,261	0/0:45,0:43:99:0,108,1706	1/1:19,1:21:43.02:476,43,0	0/0:28,0:28:55.29:0,55,731	1/1:12,0:12:31.76:326,32,0	0/0:7,0:7:14.63:0,15,111
chr10	104519240	.	G	GAAGC	8955.79	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.758;DP=522;FS=3.765;HRun=0;HaplotypeScore=104.1640;InbreedingCoeff=0.9924;MQ=73.48;MQ0=0;MQRankSum=-15.300;QD=58.92;ReadPosRankSum=-1.487;VQSLOD=6.2294;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,2156	0/0:7,0:7:18.06:0,18,334	0/0:8,0:8:20.66:0,21,334	0/0:17,0:17:24.69:0,25,664	0/0:23,0:23:66.23:0,66,1277	1/1:3,12:15:42.14:978,42,0	1/1:7,11:18:42.13:930,42,0	1/1:5,16:21:63.21:1485,63,0	0/0:23,0:23:69.24:0,69,1354	0/0:18,0:18:48.16:0,48,959	0/0:12,0:12:36.12:0,36,717	0/0:12,0:12:36.12:0,36,704	0/0:23,0:23:69.24:0,69,1378	0/0:15,0:15:42.13:0,42,804	0/0:24,0:24:72.25:0,72,1427	0/0:13,0:13:36.09:0,36,648	0/0:26,0:26:78.24:0,78,1520	0/0:21,0:21:60.21:0,60,1198	1/1:8,11:19:54.19:1231,54,0	1/1:6,15:21:51.13:1068,51,0	1/1:6,12:18:39.09:760,39,0	0/0:21,0:21:63.20:0,63,1223	0/0:13,0:13:39.13:0,39,779	0/0:23,0:23:69.22:0,69,1319	1/1:4,12:16:42.08:876,42,0	0/0:26,0:26:78.26:0,78,1508	1/1:3,21:24:72.23:1627,72,0	0/0:4,0:4:12.04:0,12,240
chr10	104519241	.	A	AAG	3719.43	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.047;DP=509;FS=1.715;HRun=0;HaplotypeScore=95.4968;InbreedingCoeff=0.9916;MQ=75.27;MQ0=0;MQRankSum=-14.886;QD=27.15;ReadPosRankSum=0.118;VQSLOD=4.6649;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1880	0/0:6,0:6:18.06:0,18,279	0/0:8,0:8:21.07:0,21,303	0/0:18,0:18:19.11:0,19,556	0/0:23,0:23:66.23:0,66,1068	1/1:15,0:15:39.10:428,39,0	1/1:14,0:14:36.08:372,36,0	1/1:19,0:19:54.13:591,54,0	0/0:23,0:23:69.24:0,69,1122	0/0:18,0:18:48.16:0,48,783	0/0:13,0:13:36.12:0,36,584	0/0:12,0:12:36.12:0,36,585	0/0:23,0:23:69.24:0,69,1125	0/0:14,0:14:42.14:0,42,680	0/0:24,0:24:72.25:0,72,1172	0/0:13,0:13:36.12:0,36,577	0/0:26,0:26:78.24:0,78,1246	0/0:21,0:21:60.20:0,60,979	1/1:16,1:17:42.75:534,43,0	1/1:17,0:17:42.14:428,42,0	1/1:14,5:19:31.07:289,31,0	0/0:22,0:22:63.22:0,63,1023	0/0:13,0:13:39.13:0,39,636	0/0:23,0:23:69.24:0,69,1114	1/1:13,0:13:39.08:400,39,0	0/0:27,0:27:78.27:0,78,1268	1/1:23,0:23:61.56:677,62,0	0/0:4,0:4:12.04:0,12,196
chr10	104519243	.	C	CT	4886.02	PASS	AB=0.567;AC=15;AF=0.268;AN=56;BaseQRankSum=15.206;DP=533;FS=3.114;HRun=0;HaplotypeScore=90.8125;InbreedingCoeff=0.9117;MQ=76.23;MQ0=0;MQRankSum=-16.134;QD=31.73;ReadPosRankSum=-1.116;VQSLOD=4.2251;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1558	0/0:6,0:6:15.05:0,15,210	0/0:9,0:9:23.97:0,24,269	0/0:19,0:19:31.74:0,32,528	0/0:22,0:22:63.18:0,63,843	1/1:6,12:18:39.34:537,39,0	1/1:6,11:17:48.12:542,48,0	1/1:9,17:26:69.92:897,70,0	0/0:23,0:23:69.22:0,69,950	0/0:18,0:18:51.16:0,51,696	0/0:15,0:15:42.10:0,42,542	0/0:12,0:12:36.09:0,36,469	0/0:24,0:24:69.23:0,69,965	0/0:14,0:14:42.14:0,42,587	0/0:24,0:24:72.23:0,72,992	0/0:14,0:14:42.12:0,42,556	0/0:25,0:25:75.25:0,75,1049	0/0:20,0:20:60.20:0,60,839	0/1:4,13:17:8.83:486,0,9	1/1:1,18:19:48.14:578,48,0	1/1:7,12:19:44.49:512,44,0	0/0:24,0:24:72.21:0,72,957	0/0:16,0:16:39.13:0,39,545	0/0:23,0:23:66.21:0,66,907	1/1:3,12:15:45.13:538,45,0	0/0:28,0:28:81.26:0,81,1118	1/1:2,21:23:69.19:797,69,0	0/0:4,0:4:12.04:0,12,168
chr10	104519880	.	T	TA	3189.35	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-8.768;DP=563;FS=9.948;HRun=6;HaplotypeScore=54.9245;InbreedingCoeff=0.9944;MQ=74.13;MQ0=0;MQRankSum=-0.985;QD=27.49;ReadPosRankSum=-1.282;VQSLOD=3.0694;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.14:0,60,612	0/0:16,0:16:39.02:0,39,379	0/0:19,0:19:32.08:0,32,305	0/0:11,0:11:15.25:0,15,173	0/0:19,0:19:48.07:0,48,476	0/0:15,0:15:39.07:0,39,390	0/0:16,0:16:42.08:0,42,422	1/1:5,23:28:66.21:830,66,0	0/0:24,0:24:63.09:0,63,621	0/0:28,0:28:72.15:0,72,726	0/0:21,0:21:54.11:0,54,545	0/0:21,0:21:57.11:0,57,575	0/0:11,0:11:33.08:0,33,337	0/0:14,0:14:39.09:0,39,398	0/0:22,0:22:60.11:0,60,605	0/0:14,0:14:36.08:0,36,367	0/0:25,0:25:69.16:0,69,704	0/0:33,0:32:87.19:0,87,886	1/1:3,17:20:51.13:612,51,0	1/1:8,23:31:72.23:904,72,0	1/1:3,8:11:21.07:264,21,0	0/0:17,0:17:51.12:0,51,520	0/0:19,0:19:51.10:0,51,513	0/0:21,0:21:60.13:0,60,612	0/0:32,0:32:81.16:0,81,819	0/0:18,0:18:48.08:0,48,476	1/1:4,22:26:60.19:755,60,0	0/0:10,0:10:21.04:0,21,214
chr10	104520085	.	C	CCTT	205.80	PASS	AB=0.906;AC=5;AF=0.089;AN=56;BaseQRankSum=5.821;DP=607;FS=7.846;HRun=0;HaplotypeScore=99.7519;InbreedingCoeff=-0.1049;MQ=50.68;MQ0=40;MQRankSum=-7.847;QD=1.87;ReadPosRankSum=-2.869;VQSLOD=-0.2024;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:29:72.79:0,73,1063	0/0:10,0:10:26.93:0,27,347	0/0:22,0:9:24.06:0,24,327	0/0:16,0:9:18.06:0,18,317	0/0:21,0:20:48.09:0,48,692	0/0:15,0:15:4.46:0,4,430	0/0:21,0:16:45.06:0,45,589	0/1:29,0:24:50.12:50,0,578	0/0:34,0:34:84.33:0,84,1259	0/0:33,0:31:87.29:0,87,1502	0/0:11,0:11:33.11:0,33,527	0/0:17,0:15:39.13:0,39,620	0/0:22,0:20:51.14:0,51,802	0/0:20,0:18:54.17:0,54,846	0/0:17,0:17:34:0,34,550	0/0:17,0:16:48.13:0,48,740	0/0:18,0:12:28.44:0,28,376	0/0:31,0:29:57.03:0,57,1070	0/1:19,0:18:99:154,0,420	0/1:10,7:16:85.24:85,0,259	0/1:8,0:7:17.80:18,0,171	0/0:15,0:15:39.60:0,40,618	0/0:27,0:26:56.89:0,57,864	0/0:21,0:15:30.08:0,30,443	0/0:26,0:25:10.82:0,11,860	0/0:23,0:22:63.69:0,64,1096	0/1:29,7:34:14.54:15,0,718	0/0:27,0:25:62.28:0,62,1088
chr10	104520149	.	TTCC	T	577.91	PASS	AB=0.862;AC=12;AF=0.214;AN=56;BaseQRankSum=6.152;DP=461;FS=0.585;HRun=0;HaplotypeScore=61.9245;InbreedingCoeff=-0.1073;MQ=44.99;MQ0=56;MQRankSum=-5.593;QD=2.85;ReadPosRankSum=-5.055;VQSLOD=-0.2034;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:19:20.59:0,21,250	0/0:11,0:11:6.42:0,6,152	0/0:5,0:2:3:0,3,25	0/0:10,0:4:11.99:0,12,103	0/0:12,5:15:25.90:0,26,195	0/1:6,12:17:22.66:55,0,23	1/1:12,0:9:15.38:115,15,0	0/0:27,0:14:35.56:0,36,248	0/1:21,6:24:19.88:20,0,332	0/0:13,0:11:29.85:0,30,263	0/0:4,0:4:12:0,12,114	0/0:13,0:11:25.99:0,26,182	0/0:18,0:15:31.05:0,31,249	0/0:21,0:17:45.45:0,45,371	0/1:9,4:12:14.40:14,0,160	0/0:15,0:13:39:0,39,435	0/0:25,0:20:22.50:0,23,365	0/1:26,0:25:15.61:16,0,398	0/0:13,0:12:9.20:0,9,167	0/1:16,0:16:29.39:29,0,146	0/0:6,0:3:2.23:0,2,24	0/1:7,3:10:19.43:19,0,109	0/1:14,4:18:99:119,0,161	0/0:19,0:12:8.22:0,8,184	0/1:22,1:21:15:251,0,15	0/0:18,0:17:32.19:0,32,458	0/1:23,0:20:72.59:73,0,91	0/1:15,2:15:18.42:18,0,253
chr10	104521193	.	TGG	T	2119.81	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.993;DP=601;FS=8.331;HRun=4;HaplotypeScore=109.5613;InbreedingCoeff=0.9933;MQ=74.92;MQ0=2;MQRankSum=-13.881;QD=16.56;ReadPosRankSum=-2.044;VQSLOD=-0.1473;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,2339	0/0:8,0:8:24.08:0,24,448	0/0:61,0:36:82.62:0,83,1105	0/0:46,0:29:49.30:0,49,845	0/0:19,0:19:57.16:0,57,979	1/1:11,1:13:34.83:253,35,0	1/1:9,4:13:36.71:310,37,0	1/1:11,6:20:49.46:408,49,0	0/0:18,0:18:54.17:0,54,961	0/0:25,0:25:72.08:0,72,1325	0/0:11,0:11:30.10:0,30,545	0/0:16,0:16:45.15:0,45,823	0/0:10,0:10:30.09:0,30,514	0/0:15,0:15:45.15:0,45,833	0/0:19,0:19:57.15:0,57,1012	0/0:15,0:15:42.14:0,42,777	0/0:39,0:39:99:0,114,2092	0/0:25,0:25:75.26:0,75,1333	1/1:8,8:20:54.03:460,54,0	1/1:7,5:13:28.83:235,29,0	1/1:3,1:8:14.74:154,15,0	0/0:24,0:24:66.21:0,66,1164	0/0:18,0:18:51.16:0,51,873	0/0:20,0:20:57.20:0,57,1032	1/1:14,1:15:14.21:139,14,0	0/0:19,0:19:57.20:0,57,1049	1/1:9,2:17:47.82:368,48,0	0/0:21,0:21:57.20:0,57,1019
chr10	104521195	.	G	GTTTT	3103.26	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.024;DP=600;FS=11.420;HRun=0;HaplotypeScore=127.9869;InbreedingCoeff=0.9947;MQ=74.98;MQ0=2;MQRankSum=-12.785;QD=24.83;ReadPosRankSum=-2.193;VQSLOD=2.5255;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,128,2623	0/0:8,0:8:24.08:0,24,504	0/0:61,0:35:79.75:0,80,1281	0/0:46,0:29:56.59:0,57,962	0/0:21,0:21:57.16:0,57,1086	1/1:7,0:12:18.18:294,18,0	1/1:10,0:13:23.22:320,23,0	1/1:15,6:19:40.71:573,41,0	0/0:19,0:19:57.17:0,57,1120	0/0:25,0:25:72.25:0,72,1483	0/0:11,0:11:30.10:0,30,622	0/0:15,0:15:45.15:0,45,926	0/0:11,0:11:30.09:0,30,555	0/0:15,0:15:45.15:0,45,923	0/0:19,0:19:57.15:0,57,1152	0/0:14,0:14:42.14:0,42,867	0/0:39,0:39:99:0,114,2334	0/0:26,0:26:78.25:0,78,1503	1/1:18,5:20:44.29:594,44,0	1/1:8,5:13:28.42:391,28,0	1/1:7,0:7:14.92:134,15,0	0/0:22,0:22:66.21:0,66,1302	0/0:18,0:18:51.16:0,51,1001	0/0:22,0:22:57.20:0,57,1156	1/1:2,0:15:26.69:360,27,0	0/0:19,0:19:57.20:0,57,1177	1/1:12,5:17:39.80:645,40,0	0/0:19,0:19:57.20:0,57,1152
chr10	104521416	.	TATACTACACACAC	T	118.15	PASS	AB=0.565;AC=4;AF=0.071;AN=56;BaseQRankSum=3.721;DP=908;FS=0.000;HRun=0;HaplotypeScore=282.8297;InbreedingCoeff=0.7306;MQ=53.69;MQ0=34;MQRankSum=-3.758;QD=1.82;ReadPosRankSum=-1.849;VQSLOD=1.8890;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:84.03:0,84,4341	0/0:12,0:12:30.10:0,30,1668	0/0:61,0:16:12.04:0,12,319	0/0:58,0:26:24.08:0,24,562	0/0:22,0:22:51.18:0,51,2733	1/1:6,11:17:5.85:198,6,0	0/1:7,24:31:0.16:0,0,1	0/0:34,0:33:84.29:0,84,3082	0/0:32,0:32:66.79:0,67,4084	0/0:37,0:37:72.22:0,72,3467	0/0:25,0:24:54.19:0,54,2863	0/0:20,0:20:44.97:0,45,2316	0/0:21,0:21:51.17:0,51,2476	0/0:20,0:20:45.15:0,45,2467	0/0:43,0:43:93.31:0,93,4964	0/0:36,0:36:87.30:0,87,4442	0/0:32,0:32:39.97:0,40,3354	0/0:19,0:19:51.18:0,51,2588	0/0:20,0:20:40.02:0,40,1595	0/0:39,0:39:81.28:0,81,4100	0/0:89,0:85:99:0,156,8137	0/0:45,0:45:99:0,108,5257	0/0:22,0:22:48.16:0,48,2370	0/0:52,0:52:99:0,132,6140	0/1:4,13:16:0:0,0,0	0/0:35,0:35:84.28:0,84,4013	0/0:14,0:14:24.08:0,24,1480	0/0:13,0:13:36.12:0,36,1799
chr10	104521594	.	TCA	T	2922.29	PASS	AB=0.900;AC=11;AF=0.196;AN=56;BaseQRankSum=7.341;DP=900;FS=21.768;HRun=0;HaplotypeScore=146.6506;InbreedingCoeff=0.8765;MQ=67.74;MQ0=12;MQRankSum=0.449;QD=17.93;ReadPosRankSum=-0.673;VQSLOD=1.8392;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:52.69:0,53,1210	0/0:9,0:9:27.09:0,27,424	0/0:36,0:24:18.65:0,19,390	0/0:33,0:20:18.80:0,19,222	0/0:27,0:27:68.85:0,69,1030	0/0:21,1:21:10.27:0,10,243	0/0:28,0:28:47.08:0,47,557	1/1:19,2:21:38.98:385,39,0	0/0:51,0:51:99:0,120,2102	0/0:57,0:56:99:0,138,2111	0/0:23,0:23:13.87:0,14,687	0/0:39,0:39:93.30:0,93,1437	0/0:30,0:30:77.93:0,78,1167	0/0:32,0:32:81.28:0,81,1317	0/0:35,0:35:83.31:0,83,1231	0/0:33,0:33:78.07:0,78,1198	0/0:28,0:28:7.25:0,7,813	0/0:23,0:23:59.34:0,59,870	1/1:10,4:14:33.08:374,33,0	1/1:25,14:39:65.01:759,65,0	1/1:37,12:49:56.95:677,57,0	0/0:38,0:37:53.14:0,53,1211	0/0:29,0:29:68.68:0,69,1004	0/0:54,0:54:99:0,135,2087	0/0:23,0:23:31.78:0,32,224	0/0:47,0:47:99:0,112,1744	1/1:25,6:30:78.21:898,78,0	0/1:8,1:9:5.62:6,0,345
chr10	104521611	.	TAC	T	3639.88	PASS	AB=0.977;AC=18;AF=0.321;AN=56;BaseQRankSum=11.543;DP=1006;FS=26.986;HRun=0;HaplotypeScore=158.7459;InbreedingCoeff=0.7785;MQ=56.54;MQ0=13;MQRankSum=-1.130;QD=11.10;ReadPosRankSum=-1.168;VQSLOD=1.6088;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,2:45:13.24:0,13,1020	0/0:12,0:12:19.88:0,20,286	0/1:22,0:11:8.39:8,0,16	0/0:27,0:11:6.02:0,6,85	0/0:30,1:31:11.11:0,11,857	1/1:13,14:26:42.72:583,43,0	1/1:13,18:31:9.03:105,9,0	1/1:23,3:24:42.85:501,43,0	0/0:56,1:57:57.58:0,58,1549	0/0:60,1:60:64.60:0,65,1714	0/0:27,0:28:14.78:0,15,569	0/0:48,0:48:69.63:0,70,1365	0/0:38,1:39:40.54:0,41,1022	0/0:37,0:37:93.23:0,93,1379	0/1:39,2:41:12.38:12,0,1198	0/0:42,1:43:29.70:0,30,1272	0/0:29,0:29:51.93:0,52,790	0/0:28,0:28:65.72:0,66,1067	1/1:13,4:17:26.58:254,27,0	1/1:25,15:39:48.21:597,48,0	1/1:53,13:65:63.97:722,64,0	0/0:38,1:38:4.62:0,5,740	0/0:34,0:34:29.59:0,30,837	0/0:53,0:53:99:0,99,1478	1/1:4,21:25:29.76:327,30,0	0/0:51,1:52:76.01:0,76,1526	1/1:19,12:31:50.91:530,51,0	0/0:15,0:15:5.68:0,6,456
chr10	104521986	.	T	TAC	2327.06	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=6.736;DP=947;FS=7.399;HRun=0;HaplotypeScore=171.8887;InbreedingCoeff=0.6393;MQ=54.99;MQ0=13;MQRankSum=-0.773;QD=11.87;ReadPosRankSum=-2.127;VQSLOD=2.5121;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:58:99:0,141,1661	0/0:12,0:11:24.08:0,24,301	0/0:37,0:14:4.69:0,5,151	0/0:37,0:20:11.43:0,11,102	0/0:24,0:25:54.39:0,54,634	1/1:20,7:28:43.18:660,43,0	1/1:27,7:35:59.73:871,60,0	0/1:35,0:31:37.54:53,0,38	0/0:50,0:49:99:0,110,1352	0/0:54,0:54:99:0,126,1471	0/0:17,0:16:33.10:0,33,411	0/0:38,0:38:96.06:0,96,1116	0/0:31,0:32:65.99:0,66,767	0/0:26,0:26:63.19:0,63,781	0/0:44,0:44:81.14:0,81,962	0/0:42,0:42:99:0,99,1192	0/0:36,1:38:49.28:0,49,1102	0/0:21,0:22:57.01:0,57,689	0/1:14,0:13:41.57:46,0,42	0/0:20,0:20:3.08:0,3,12	1/1:57,0:57:1.88:14,2,0	0/0:22,0:22:45.11:0,45,540	0/0:26,0:27:68.84:0,69,820	0/0:46,0:47:99:0,107,1299	1/1:18,9:27:57.17:841,57,0	0/0:46,0:46:99:0,119,1436	0/0:30,0:30:24.65:0,25,118	0/0:26,0:26:63.20:0,63,792
chr10	104521989	.	ACACACACACG	A	2911.17	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=10.748;DP=938;FS=0.463;HRun=0;HaplotypeScore=291.2711;InbreedingCoeff=0.6503;MQ=54.94;MQ0=13;MQRankSum=-4.196;QD=11.93;ReadPosRankSum=-5.147;VQSLOD=1.3848;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,154,5442	0/0:14,0:13:30.09:0,30,1228	0/0:38,0:13:10.97:0,11,181	0/0:32,0:16:11.33:0,11,84	0/0:23,0:23:57.80:0,58,2252	0/1:27,0:27:31.18:31,0,752	0/1:34,0:34:46.36:46,0,640	1/1:10,26:32:5.64:773,6,0	0/0:52,0:50:99:0,118,4172	0/0:55,0:55:99:0,141,4241	0/0:17,0:16:36.12:0,36,1417	0/0:36,0:36:96.13:0,96,3334	0/0:31,0:31:77.58:0,78,2742	0/0:28,0:28:72.22:0,72,3249	0/0:40,0:40:84.50:0,85,2966	0/0:39,0:39:99:0,99,4089	0/0:39,0:39:99:0,105,4130	0/0:23,0:23:60.17:0,60,2219	1/1:2,13:14:38.99:717,39,0	1/1:3,17:20:18.35:338,18,0	1/1:14,41:54:10.29:101,10,0	0/0:23,0:23:47.86:0,48,1674	0/0:27,0:27:68.73:0,69,2079	0/0:48,0:48:95.55:0,96,3858	0/1:27,0:27:65.05:65,0,840	0/0:47,0:46:99:0,110,5033	1/1:5,25:30:35.62:1017,36,0	0/0:23,0:23:63.22:0,63,2978
chr10	104521997	.	ACG	A	1458.78	PASS	AB=0.891;AC=14;AF=0.250;AN=56;BaseQRankSum=13.820;DP=886;FS=4.981;HRun=0;HaplotypeScore=155.1062;InbreedingCoeff=0.6127;MQ=54.08;MQ0=16;MQRankSum=-1.993;QD=5.91;ReadPosRankSum=-3.196;VQSLOD=2.5475;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:57.84:0,58,1958	0/0:12,0:11:29.98:0,30,433	0/0:36,0:12:6.03:0,6,123	0/1:26,0:8:3.07:3,0,62	0/0:21,0:21:39.29:0,39,844	0/1:21,4:25:44.59:154,0,45	0/1:25,5:30:27.33:201,0,27	1/1:32,0:27:64.25:476,64,0	0/0:51,0:49:99:0,115,1778	0/0:53,0:52:99:0,148,1967	0/0:15,0:14:33.77:0,34,475	0/0:37,0:37:91.85:0,92,1457	0/0:30,0:30:64.57:0,65,1160	0/0:27,0:27:71.65:0,72,1180	0/0:33,0:33:57.80:0,58,1217	0/0:38,0:38:83.92:0,84,1617	0/0:42,0:42:55.36:0,55,1483	0/0:23,0:23:20.24:0,20,856	1/1:14,0:13:38.53:273,39,0	1/1:17,0:17:14.66:90,15,0	1/1:49,0:48:9.35:62,9,0	0/0:20,0:20:36.65:0,37,708	0/0:27,0:27:35.95:0,36,863	0/0:48,0:48:83.70:0,84,1641	0/1:22,5:27:60.56:172,0,61	0/0:46,0:45:64.58:0,65,1712	1/1:27,0:27:34.89:209,35,0	0/0:22,0:22:51.34:0,51,1105
chr10	104521999	.	G	GCA	1552.63	PASS	AB=1.000;AC=10;AF=0.185;AN=54;BaseQRankSum=8.410;DP=872;FS=5.917;HRun=0;HaplotypeScore=155.6951;InbreedingCoeff=0.6404;MQ=54.04;MQ0=18;MQRankSum=-0.730;QD=8.72;ReadPosRankSum=-4.903;VQSLOD=2.1724;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:56:99:0,131,1382	0/0:12,0:11:24.07:0,24,290	0/0:34,0:10:11.88:0,12,99	./.	0/0:23,0:23:48.13:0,48,557	1/1:18,8:26:38.87:500,39,0	1/1:22,8:30:6:487,6,0	0/1:30,0:25:18.74:19,0,23	0/0:47,0:46:90.11:0,90,1063	0/0:51,0:50:93.25:0,93,1099	0/0:14,0:14:30.06:0,30,331	0/0:36,0:37:53.09:0,53,822	0/0:29,0:29:63.08:0,63,722	0/0:26,0:26:69.13:0,69,807	0/0:30,0:32:38.46:0,38,679	0/0:36,0:37:70.76:0,71,1040	0/0:42,0:43:67.12:0,67,941	0/0:23,0:23:51.72:0,52,536	0/1:18,0:15:36.33:71,0,36	0/0:17,0:17:3.08:0,3,12	1/1:48,0:47:2.88:16,3,0	0/0:16,0:17:41.93:0,42,452	0/0:25,0:26:49.58:0,50,506	0/0:48,0:48:81.09:0,81,960	1/1:16,10:26:49.93:613,50,0	0/0:42,0:46:99:0,103,1128	0/0:26,0:27:23.69:0,24,117	0/0:22,0:22:61.02:0,61,702
chr10	104524647	.	C	CT	3633.18	PASS	AB=0.633;AC=15;AF=0.268;AN=56;BaseQRankSum=-11.961;DP=618;FS=2.192;HRun=10;HaplotypeScore=62.8482;InbreedingCoeff=0.8139;MQ=82.87;MQ0=1;MQRankSum=-0.256;QD=19.96;ReadPosRankSum=-0.625;VQSLOD=4.2956;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,1:50:88.82:0,89,907	0/0:10,0:10:20.97:0,21,172	0/0:24,0:23:10.25:0,10,143	0/0:17,0:16:10.13:0,10,149	0/0:19,1:22:14.01:0,14,300	1/1:5,17:22:1.84:430,2,0	1/1:7,18:25:2.31:431,2,0	1/1:5,26:31:78.17:821,78,0	0/0:18,0:20:39.99:0,40,307	0/0:18,0:18:38.93:0,39,320	0/0:19,0:19:35.90:0,36,295	0/0:19,0:19:50.94:0,51,419	0/0:16,0:17:34.94:0,35,271	0/0:17,0:17:50.94:0,51,418	0/0:26,0:27:70.94:0,71,569	0/0:19,0:22:52.98:0,53,425	0/0:28,1:29:27.95:0,28,477	0/0:18,0:19:46.98:0,47,375	1/1:4,10:15:35.88:348,36,0	1/1:4,14:18:39.10:416,39,0	0/1:7,11:19:29.04:166,0,29	0/0:19,0:19:50.94:0,51,419	0/0:14,0:15:28.96:0,29,227	0/0:22,0:23:58.95:0,59,474	1/1:2,18:19:26.48:487,26,0	0/0:24,1:26:23.94:0,24,393	1/1:10,21:32:32.33:533,32,0	0/0:22,0:23:61.97:0,62,499
chr10	104524940	.	T	TAA	1200.57	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-0.561;DP=488;FS=4.513;HRun=13;HaplotypeScore=75.5041;InbreedingCoeff=0.8484;MQ=77.58;MQ0=1;MQRankSum=0.971;QD=14.46;ReadPosRankSum=-4.451;VQSLOD=1.6865;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:53.38:0,53,443	0/0:4,0:5:11.69:0,12,91	0/0:24,0:18:6.13:0,6,62	0/0:16,0:13:3.67:0,4,29	0/0:23,0:24:24.31:0,24,358	0/0:24,0:25:47.25:0,47,390	0/0:22,0:23:43.81:0,44,362	1/1:9,16:30:31.47:529,31,0	0/0:9,0:9:20.87:0,21,178	0/0:31,0:32:50.60:0,51,493	0/0:18,0:18:44.69:0,45,380	0/0:11,0:13:5.75:0,6,92	0/0:14,0:14:26.76:0,27,236	0/0:4,0:5:5.65:0,6,38	0/0:21,0:21:35.69:0,36,316	0/0:14,0:14:20.72:0,21,181	0/0:20,0:22:56.31:0,56,467	0/0:20,0:19:22.92:0,23,352	1/1:9,0:10:12.01:124,12,0	1/1:3,10:18:28.97:286,29,0	1/1:2,6:8:12.04:163,12,0	0/0:12,0:12:26.90:0,27,232	0/0:4,0:4:5.96:0,6,53	0/0:7,0:9:23.46:0,23,182	0/0:23,0:23:41.60:0,42,354	0/0:26,0:27:37.36:0,37,479	1/1:5,12:15:21.04:267,21,0	0/0:17,0:17:29.78:0,30,244
chr10	104528607	.	C	CATTATTATT	1632.51	PASS	AC=18;AF=0.391;AN=46;BaseQRankSum=-1.894;DP=260;FS=0.000;HRun=0;HaplotypeScore=71.2220;InbreedingCoeff=0.6507;MQ=75.30;MQ0=1;MQRankSum=-6.104;QD=17.94;ReadPosRankSum=-3.092;VQSLOD=1.2377;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:21.07:0,21,537	0/0:4,0:5:9:0,9,167	./.	./.	1/1:7,0:8:1.63:30,2,0	1/1:4,0:4:3.01:37,3,0	1/1:7,0:7:3:27,3,0	1/1:24,0:24:17.88:132,18,0	./.	0/0:7,0:7:8.77:0,9,175	0/0:8,0:8:9.01:0,9,160	0/0:4,0:5:7.25:0,7,109	./.	0/0:5,0:5:3.01:0,3,82	0/0:7,0:8:3.01:0,3,63	0/0:5,0:6:6.02:0,6,145	0/0:22,0:24:36.12:0,36,877	0/0:18,0:17:33:0,33,766	1/1:9,0:9:6.01:67,6,0	1/1:11,0:11:12.01:267,12,0	1/1:7,0:7:3.01:112,3,0	0/0:9,0:9:3:0,3,25	0/0:7,0:7:6.01:0,6,88	./.	1/1:4,3:7:12.04:445,12,0	0/0:11,0:11:12.04:0,12,319	1/1:7,7:14:15.05:676,15,0	0/0:14,0:15:9.03:0,9,213
chr10	104528741	.	C	CATGT	919.47	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.146;DP=455;FS=1.035;HRun=0;HaplotypeScore=85.1330;InbreedingCoeff=0.8644;MQ=60.59;MQ0=7;MQRankSum=-3.293;QD=27.86;ReadPosRankSum=0.877;VQSLOD=3.5885;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:76.50:0,76,1515	0/0:8,0:9:24.42:0,24,334	0/0:36,0:17:36.25:0,36,440	0/0:27,0:14:21.33:0,21,326	0/0:12,0:12:36.03:0,36,655	1/1:1,9:10:9.94:341,10,0	1/1:0,4:6:3.01:80,3,0	0/0:16,0:27:17.80:0,18,331	0/0:7,0:8:23.71:0,24,283	0/0:11,0:12:32.79:0,33,519	0/0:11,0:12:30.10:0,30,567	0/0:13,0:14:38.98:0,39,613	0/0:8,0:8:23.93:0,24,361	0/0:17,0:18:53.95:0,54,863	0/0:9,0:9:22:0,22,451	0/0:11,0:12:36.05:0,36,640	0/0:20,0:21:62.63:0,63,1083	0/0:25,0:25:69.13:0,69,1242	0/0:6,0:12:16.77:0,17,100	0/0:2,0:16:6.59:0,7,73	0/0:6,0:25:16.54:0,17,155	0/0:12,0:12:36.09:0,36,695	0/0:11,0:12:32.50:0,33,543	0/0:13,0:13:36.05:0,36,663	1/1:0,14:17:24.07:625,24,0	0/0:12,0:11:30.04:0,30,507	0/0:8,0:18:20.93:0,21,163	0/0:14,0:15:22.98:0,23,535
chr10	104529106	.	ATTAG	A	1877.40	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.048;DP=955;FS=7.081;HRun=0;HaplotypeScore=167.0774;InbreedingCoeff=0.8699;MQ=69.24;MQ0=0;MQRankSum=-0.074;QD=20.63;ReadPosRankSum=4.278;VQSLOD=2.7194;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,2493	0/0:22,0:22:60.21:0,60,1485	0/0:13,0:13:27.07:0,27,503	0/0:10,0:10:1.05:0,1,273	0/0:30,0:30:84.25:0,84,1893	1/1:2,23:25:42.14:742,42,0	1/1:5,20:25:4.26:102,4,0	0/0:34,0:34:78.26:0,78,1855	0/0:57,0:57:99:0,154,3789	0/0:56,0:56:99:0,160,3885	0/0:23,0:23:66.23:0,66,1627	0/0:43,0:43:99:0,126,3182	0/0:50,0:50:99:0,132,3250	0/0:40,0:40:99:0,105,2645	0/0:48,0:48:99:0,126,3031	0/0:39,0:39:96.32:0,96,2332	0/0:38,0:38:99:0,105,2607	0/0:21,0:21:57.12:0,57,1301	0/0:29,0:29:66.23:0,66,1695	0/0:31,0:31:78.25:0,78,1886	0/0:50,0:50:99:0,135,3280	0/0:33,0:33:97.22:0,97,2391	0/0:27,0:27:75.24:0,75,1831	0/0:42,0:42:99:0,117,2796	1/1:2,39:41:66.23:1166,66,0	0/0:42,0:42:99:0,111,2817	0/0:24,0:24:60.21:0,60,1540	0/0:24,0:24:63.22:0,63,1596
chr10	104530281	.	G	GCA	2446.48	PASS	AB=0.874;AC=15;AF=0.268;AN=56;BaseQRankSum=5.447;DP=630;FS=6.005;HRun=0;HaplotypeScore=103.1939;InbreedingCoeff=0.0043;MQ=61.20;MQ0=4;MQRankSum=0.847;QD=8.44;ReadPosRankSum=-1.590;VQSLOD=2.2073;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:45:97.81:0,98,987	0/0:9,0:10:17.87:0,18,176	0/0:31,0:16:5.95:0,6,52	0/1:23,0:9:15.93:16,0,49	0/1:20,2:23:54.02:54,0,309	0/1:12,7:19:14.61:290,0,15	1/1:24,8:32:23.99:509,24,0	1/1:17,2:19:14.87:171,15,0	0/0:20,0:24:11.06:0,11,314	0/0:19,0:20:35.92:0,36,383	0/1:7,0:10:19.04:19,0,87	0/0:20,0:22:41.78:0,42,441	0/0:12,0:13:20.89:0,21,219	0/1:19,0:20:7.51:8,0,322	0/0:14,0:15:32.92:0,33,355	0/0:15,0:15:35.75:0,36,380	0/0:34,0:36:62.99:0,63,690	0/0:21,0:22:51.86:0,52,560	0/1:15,2:18:18.21:200,0,18	0/1:12,3:15:17.24:202,0,17	0/1:53,10:63:33.51:754,0,34	0/0:16,0:16:14.04:0,14,281	0/0:12,0:13:23.90:0,24,255	0/0:37,0:44:80.34:0,80,839	0/1:9,6:15:23.10:287,0,23	0/1:21,0:22:22.38:22,0,189	0/1:5,4:9:11.52:81,0,12	0/0:12,0:14:21.87:0,22,387
chr10	104531095	.	A	AGT	781.88	PASS	AB=0.714;AC=5;AF=0.089;AN=56;BaseQRankSum=7.249;DP=569;FS=27.704;HRun=0;HaplotypeScore=85.2116;InbreedingCoeff=0.7244;MQ=80.29;MQ0=2;MQRankSum=-3.975;QD=20.05;ReadPosRankSum=0.888;VQSLOD=1.7801;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.16:0,69,844	0/0:8,0:8:21.07:0,21,276	0/0:31,0:25:39.56:0,40,475	0/0:35,0:29:61:0,61,697	0/0:26,0:26:72.12:0,72,900	1/1:3,8:11:21.07:343,21,0	0/1:9,6:15:54.01:220,0,54	0/0:32,0:32:81.24:0,81,1029	0/0:21,0:21:60.14:0,60,754	0/0:32,0:32:90.27:0,90,1155	0/0:13,0:12:36.12:0,36,473	0/0:17,0:17:48.16:0,48,630	0/0:15,0:15:45.13:0,45,576	0/0:14,0:14:42.12:0,42,537	0/0:18,0:18:54.16:0,54,693	0/0:21,0:21:60.18:0,60,773	0/0:35,0:35:99:0,99,1299	0/0:16,0:16:39.13:0,39,511	0/0:16,0:16:36.11:0,36,460	0/0:18,0:18:45.15:0,45,591	0/0:24,0:24:63.18:0,63,810	0/0:13,0:13:39.07:0,39,491	0/0:18,0:18:48.13:0,48,613	0/0:21,0:21:63.15:0,63,781	1/1:2,11:12:6.18:340,6,0	0/0:22,0:22:66.20:0,66,851	0/0:25,0:25:66.21:0,66,867	0/0:15,0:15:45.09:0,45,554
chr10	104531133	.	TGA	T	663.46	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.216;DP=638;FS=9.414;HRun=0;HaplotypeScore=94.0617;InbreedingCoeff=0.9914;MQ=71.06;MQ0=1;MQRankSum=-4.262;QD=11.44;ReadPosRankSum=0.701;VQSLOD=2.7988;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,1556	0/0:10,0:10:30.10:0,30,489	0/0:26,0:23:48.11:0,48,691	0/0:28,0:24:54.85:0,55,715	0/0:24,0:24:57.20:0,57,996	1/1:2,17:19:24.08:317,24,0	1/1:0,23:23:21.07:283,21,0	0/0:31,0:31:78.22:0,78,1236	0/0:27,0:27:72.22:0,72,1203	0/0:31,0:31:84.19:0,84,1333	0/0:15,0:15:36.08:0,36,547	0/0:19,0:19:39.12:0,39,649	0/0:15,0:15:36.10:0,36,595	0/0:17,0:17:48.14:0,48,775	0/0:26,0:26:72.21:0,72,1176	0/0:27,0:27:75.22:0,75,1230	0/0:42,0:42:99:0,111,1692	0/0:17,0:17:32.99:0,33,477	0/0:20,0:20:57.15:0,57,896	0/0:21,0:21:54.18:0,54,943	0/0:31,0:31:69.19:0,69,1117	0/0:14,0:14:30.10:0,30,523	0/0:16,0:16:36.04:0,36,584	0/0:23,0:23:63.17:0,63,1045	1/1:6,10:15:15.05:202,15,0	0/0:25,0:25:66.20:0,66,1081	0/0:24,0:24:69.21:0,69,1121	0/0:14,0:14:33.04:0,33,487
chr10	104531364	.	TG	T	4587.15	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=8.356;DP=594;FS=0.361;HRun=2;HaplotypeScore=63.0618;InbreedingCoeff=0.9219;MQ=60.96;MQ0=0;MQRankSum=2.457;QD=27.30;ReadPosRankSum=-2.991;VQSLOD=3.6841;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,112,1474	0/0:11,0:11:33.09:0,33,467	0/1:7,0:4:8.37:8,0,25	0/0:11,0:7:13.28:0,13,150	0/0:34,0:34:93.29:0,93,1330	1/1:9,15:24:44.47:518,44,0	1/1:0,12:12:24.04:262,24,0	1/1:9,24:33:93.24:1113,93,0	0/0:27,0:27:80.80:0,81,1065	0/0:29,0:29:81.07:0,81,1082	0/0:17,0:17:42.81:0,43,581	0/0:17,0:17:48.12:0,48,647	0/0:22,0:22:63.19:0,63,899	0/0:21,0:21:54.12:0,54,715	0/0:32,0:32:75.86:0,76,984	0/0:16,0:16:44.74:0,45,568	0/0:21,0:21:48.60:0,49,672	0/0:18,0:18:33.11:0,33,489	1/1:1,16:18:48.56:543,49,0	1/1:1,21:22:59.84:623,60,0	1/1:1,15:16:27.07:331,27,0	0/0:22,0:22:65.39:0,65,860	0/0:26,0:26:75:0,75,976	0/0:19,0:19:51.17:0,51,753	1/1:6,9:15:41.21:419,41,0	0/0:22,0:22:63.04:0,63,843	1/1:0,21:21:60.19:769,60,0	0/0:20,0:20:54.18:0,54,785
chr10	104531366	.	GT	G	890.27	PASS	AB=0.963;AC=16;AF=0.286;AN=56;BaseQRankSum=13.699;DP=605;FS=0.802;HRun=11;HaplotypeScore=80.1958;InbreedingCoeff=0.5816;MQ=59.94;MQ0=0;MQRankSum=1.274;QD=4.47;ReadPosRankSum=-1.643;VQSLOD=0.9960;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,1:42:71.51:0,72,928	0/0:11,0:11:30.06:0,30,308	0/1:8,0:4:1.81:2,0,28	0/0:11,0:7:8.30:0,8,65	0/0:35,0:35:99:0,102,1038	0/1:25,0:25:62.40:83,0,62	1/1:13,0:13:18.70:75,19,0	1/1:35,0:35:24.82:242,25,0	0/0:25,0:26:71.99:0,72,735	0/0:28,1:29:44.52:0,45,670	0/1:14,3:17:7.21:7,0,322	0/0:16,0:16:42.07:0,42,432	0/0:22,0:22:60.15:0,60,640	0/0:19,0:19:42.04:0,42,420	0/0:30,2:32:19.84:0,20,609	0/0:14,0:15:32.19:0,32,367	0/0:21,1:22:26.17:0,26,448	0/0:17,2:19:14.44:0,14,350	1/1:20,0:20:22.78:128,23,0	1/1:23,0:23:1.29:128,1,0	1/1:18,0:18:0.55:81,1,0	0/0:21,0:21:54.12:0,54,561	0/0:26,1:27:35.43:0,35,551	0/0:19,0:19:51.09:0,51,526	0/1:17,0:17:34.10:64,0,34	0/0:19,0:21:56.87:0,57,564	1/1:23,0:23:38.94:257,39,0	0/0:17,0:19:53.97:0,54,558
chr10	104532146	.	G	GC	2053.73	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.372;DP=660;FS=8.790;HRun=0;HaplotypeScore=78.7142;InbreedingCoeff=0.9942;MQ=73.99;MQ0=0;MQRankSum=-2.150;QD=31.60;ReadPosRankSum=0.212;VQSLOD=2.6931;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,1905	0/0:6,0:6:15.05:0,15,210	0/0:30,0:30:86.96:0,87,1105	0/0:20,0:18:53.14:0,53,668	0/0:16,0:16:42.14:0,42,572	1/1:5,18:23:61.34:754,61,0	1/1:2,26:29:82.20:1031,82,0	0/0:37,0:37:99:0,108,1504	0/0:22,0:22:63.19:0,63,862	0/0:24,0:24:69.22:0,69,946	0/0:17,0:17:45.14:0,45,611	0/0:28,0:28:84.27:0,84,1156	0/0:17,0:17:48.15:0,48,653	0/0:12,0:12:36.12:0,36,498	0/0:29,0:29:84.28:0,84,1174	0/0:25,0:25:75.25:0,75,1047	0/0:30,0:30:90.30:0,90,1252	0/0:24,0:24:72.24:0,72,1000	0/0:21,0:21:63.21:0,63,876	0/0:15,0:15:42.14:0,42,587	0/0:30,0:30:90.28:0,90,1237	0/0:18,0:18:54.18:0,54,748	0/0:24,0:24:72.23:0,72,990	0/0:31,0:31:84.28:0,84,1174	1/1:2,11:13:33.10:411,33,0	0/0:21,0:21:60.20:0,60,839	0/0:20,0:20:60.15:0,60,797	0/0:31,0:31:93.31:0,93,1288
chr10	104535217	.	T	TA	1926.37	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-8.633;DP=668;FS=6.344;HRun=12;HaplotypeScore=75.9861;InbreedingCoeff=0.9505;MQ=70.22;MQ0=1;MQRankSum=-0.730;QD=15.41;ReadPosRankSum=-3.509;VQSLOD=3.1647;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,3:55:75.74:0,76,882	0/0:10,0:10:20.85:0,21,153	0/0:14,0:12:16.47:0,16,103	0/0:11,0:12:12.77:0,13,75	0/0:23,0:24:61.62:0,62,440	0/0:27,0:28:61.59:0,62,444	0/0:25,0:29:48.74:0,49,340	1/1:13,27:40:24.34:696,24,0	0/0:20,0:21:43.71:0,44,312	0/0:26,1:28:14.55:0,15,261	0/0:25,0:27:51.70:0,52,362	0/0:13,1:17:15.65:0,16,246	0/0:14,0:14:32.80:0,33,241	0/0:24,0:26:55.63:0,56,400	0/0:26,0:28:70.60:0,71,508	0/0:20,0:21:49.73:0,50,356	0/0:22,0:23:64.62:0,65,462	0/0:28,0:28:83.50:0,83,610	1/1:7,7:14:5.14:203,5,0	1/1:5,17:22:17.06:306,17,0	1/1:5,17:22:48.08:467,48,0	0/0:22,0:22:33.87:0,34,333	0/0:19,0:19:44.66:0,45,326	0/0:29,1:31:56.36:0,56,567	0/0:14,0:16:35.99:0,36,251	0/0:23,1:24:24.47:0,24,343	1/1:4,22:27:44.90:423,45,0	0/0:23,0:24:61.68:0,62,443
chr10	104535356	.	TG	T	1835.54	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.692;DP=657;FS=3.967;HRun=3;HaplotypeScore=71.0592;InbreedingCoeff=0.9945;MQ=79.65;MQ0=0;MQRankSum=-3.528;QD=32.20;ReadPosRankSum=0.164;VQSLOD=3.8398;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,1907	0/0:8,0:8:24.07:0,24,327	0/0:23,0:21:56.99:0,57,760	0/0:22,0:18:19.81:0,20,570	0/0:31,0:31:93.24:0,93,1245	1/1:0,20:20:60.19:739,60,0	1/1:3,18:21:60.11:695,60,0	0/0:24,0:24:66.20:0,66,900	0/0:28,0:28:81.25:0,81,1130	0/0:37,0:37:99:0,108,1515	0/0:23,0:23:66.22:0,66,932	0/0:21,0:21:54.17:0,54,756	0/0:18,0:18:54.18:0,54,776	0/0:19,0:19:54.18:0,54,776	0/0:25,0:25:72.24:0,72,1036	0/0:24,0:24:69.16:0,69,966	0/0:33,0:33:96.28:0,96,1343	0/0:16,0:16:48.16:0,48,689	0/0:16,0:16:48.14:0,48,671	0/0:25,0:25:72.14:0,72,991	0/0:18,0:18:54.17:0,54,758	0/0:17,0:17:51.16:0,51,715	0/0:22,0:22:63.21:0,63,901	0/0:36,0:36:99:0,108,1535	1/1:1,15:16:45.13:544,45,0	0/0:37,0:37:99:0,108,1523	0/0:25,0:25:72.22:0,72,1016	0/0:6,0:6:18.06:0,18,259
chr10	104535382	.	T	TA	1040.99	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=10.993;DP=646;FS=0.564;HRun=0;HaplotypeScore=77.3184;InbreedingCoeff=0.7983;MQ=69.02;MQ0=0;MQRankSum=-2.922;QD=11.32;ReadPosRankSum=-2.004;VQSLOD=3.0723;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,1922	0/0:8,0:8:24.05:0,24,315	0/1:18,0:13:0.36:0,0,142	0/1:14,0:9:3.31:3,0,116	0/0:30,0:30:84.27:0,84,1157	1/1:8,10:18:32.05:383,32,0	1/1:6,20:26:38.63:539,39,0	0/0:21,0:21:54.17:0,54,727	0/0:26,0:26:78.26:0,78,1088	0/0:34,0:34:99:0,102,1358	0/0:22,0:22:63.19:0,63,824	0/0:22,0:22:63.21:0,63,879	0/0:21,0:21:60.17:0,60,804	0/0:27,0:27:78.25:0,78,1068	0/0:32,0:32:93.29:0,93,1263	0/0:23,0:23:69.21:0,69,945	0/0:32,0:32:96.32:0,96,1338	0/0:18,0:18:51.13:0,51,671	0/0:15,0:15:45.13:0,45,594	0/0:22,0:22:66.19:0,66,871	0/0:13,0:13:36.04:0,36,444	0/0:24,0:24:72.16:0,72,935	0/0:18,0:18:54.18:0,54,752	0/0:34,0:34:99:0,99,1328	1/1:9,7:16:13.86:257,14,0	0/0:33,0:33:96.27:0,96,1291	0/0:25,0:25:75.24:0,75,1024	0/0:6,0:6:18.06:0,18,252
chr10	104536949	.	GT	G	2731.06	PASS	AB=0.881;AC=50;AF=0.926;AN=54;BaseQRankSum=-4.900;DP=207;FS=40.802;HRun=1;HaplotypeScore=40.0752;InbreedingCoeff=0.2948;MQ=71.24;MQ0=14;MQRankSum=-3.399;QD=15.17;ReadPosRankSum=-0.166;VQSLOD=0.9672;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:12.04:166,12,0	1/1:2,2:4:9.22:68,9,0	0/0:17,0:8:16.28:0,16,191	0/1:17,1:11:1.12:1,0,123	1/1:3,5:7:5.66:39,6,0	1/1:0,3:3:9.02:99,9,0	1/1:2,5:7:14.29:108,14,0	1/1:6,1:3:5.85:53,6,0	1/1:0,10:10:9.03:120,9,0	1/1:1,5:5:14.99:169,15,0	1/1:0,4:4:3.01:42,3,0	1/1:1,6:7:15.04:192,15,0	1/1:0,6:6:11.07:131,11,0	1/1:1,7:8:18.94:239,19,0	1/1:1,5:6:11.63:100,12,0	1/1:0,7:8:18.06:236,18,0	1/1:2,5:5:9.03:125,9,0	1/1:5,6:10:22.74:235,23,0	1/1:5,0:3:2.94:18,3,0	1/1:3,2:5:4.26:13,4,0	0/1:5,1:6:7.98:80,0,8	1/1:2,0:2:2.97:20,3,0	1/1:0,5:5:6.02:82,6,0	./.	1/1:1,5:5:12:111,12,0	1/1:1,7:7:20.92:181,21,0	1/1:2,1:3:3.01:37,3,0	1/1:0,8:7:14.96:184,15,0
chr10	104536956	.	GGA	G	1192.60	PASS	AB=0.906;AC=26;AF=0.464;AN=56;BaseQRankSum=0.941;DP=309;FS=9.387;HRun=0;HaplotypeScore=64.9983;InbreedingCoeff=0.0870;MQ=63.09;MQ0=5;MQRankSum=-6.244;QD=6.08;ReadPosRankSum=-0.438;VQSLOD=1.4408;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:11:1.80:0,2,114	0/1:7,3:10:40.53:111,0,41	0/0:17,0:9:17.71:0,18,183	0/1:19,0:11:12.21:12,0,92	0/0:15,1:15:24.05:0,24,330	1/1:4,0:4:6.98:38,7,0	1/1:8,2:9:15.25:154,15,0	1/1:13,4:14:4.85:178,5,0	0/1:15,2:15:67.41:84,0,67	0/1:6,2:7:52.39:52,0,198	0/0:6,1:7:8.76:0,9,139	0/0:9,1:10:20.74:0,21,243	0/1:11,0:11:16.90:17,0,251	0/0:12,0:12:30.02:0,30,410	0/1:6,1:7:20.05:20,0,54	0/0:11,0:11:26.89:0,27,326	0/0:11,0:11:1.32:0,1,212	0/1:12,1:12:33.16:33,0,263	1/1:2,6:7:5.10:133,5,0	1/1:3,3:6:3.37:9,3,0	1/1:4,5:9:19:184,19,0	0/1:10,0:10:15.40:15,0,212	0/0:8,1:8:2.98:0,3,95	0/0:8,0:7:3.01:0,3,48	1/1:9,3:10:17.63:160,18,0	0/1:15,3:17:99:118,0,423	1/1:2,1:3:3.01:41,3,0	0/1:13,1:13:7.66:8,0,285
chr10	104536958	.	A	AGAGG	2174.65	PASS	AB=0.951;AC=28;AF=0.500;AN=56;BaseQRankSum=0.456;DP=330;FS=21.826;HRun=0;HaplotypeScore=84.4619;InbreedingCoeff=-0.1320;MQ=61.70;MQ0=6;MQRankSum=-4.931;QD=8.63;ReadPosRankSum=-0.415;VQSLOD=0.9383;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:11:11.84:27,0,12	0/1:9,1:11:10.56:166,0,11	0/0:19,0:9:19.75:0,20,217	0/1:22,0:12:40.34:40,0,104	0/0:16,0:15:23.96:0,24,288	1/1:3,1:4:9.03:149,9,0	1/1:9,1:10:20.94:322,21,0	0/1:10,7:14:2.35:305,0,2	0/1:17,0:15:31.90:54,0,32	0/1:10,0:9:44.68:45,0,75	0/1:8,0:8:4.81:5,0,78	0/0:10,0:10:5.41:0,5,124	0/1:12,0:12:34.31:34,0,185	0/0:12,0:12:24.65:0,25,249	0/1:6,0:7:29.12:43,0,29	0/0:12,0:12:17.48:0,17,172	0/1:11,0:11:37.25:37,0,137	0/1:13,0:12:21.65:22,0,115	1/1:11,0:10:11.68:207,12,0	0/1:4,2:8:1.12:19,0,1	1/1:9,0:9:16.68:161,17,0	0/1:10,1:11:29.14:29,0,204	0/1:9,0:8:30.78:31,0,40	0/0:9,0:8:3.01:0,3,48	1/1:8,4:10:20.72:383,21,0	0/1:18,1:18:99:199,0,261	1/1:1,1:3:3.01:57,3,0	0/1:15,0:14:10.26:10,0,158
chr10	104540804	.	G	GTACCCAGCACACCACTTAGACTTTC	1535.74	PASS	AB=0.778;AC=19;AF=0.950;AN=20;BaseQRankSum=-2.725;DP=27;FS=29.117;HRun=0;HaplotypeScore=45.5908;InbreedingCoeff=-0.2132;MQ=173.71;MQ0=0;MQRankSum=-1.896;QD=61.43;ReadPosRankSum=-0.474;VQSLOD=0.8754;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:6.02:92,6,0	./.	1/1:2,1:6:12.04:875,12,0	0/1:5,0:7:41.45:399,0,41	./.	./.	./.	1/1:1,0:1:3:27,3,0	1/1:2,0:2:3:25,3,0	./.	./.	./.	./.	1/1:1,0:1:3.01:74,3,0	1/1:1,0:1:3:25,3,0	./.	./.	./.	./.	1/1:1,0:1:3.01:50,3,0	1/1:2,0:2:2.99:24,3,0	./.	./.	./.	./.	./.	./.	1/1:1,0:1:2.99:24,3,0
chr10	104541258	.	C	CCCT	8871.11	PASS	AB=0.822;AC=52;AF=0.963;AN=54;BaseQRankSum=-1.854;DP=282;FS=34.259;HRun=0;HaplotypeScore=286.6351;InbreedingCoeff=-0.0768;MQ=69.89;MQ0=0;MQRankSum=-4.059;QD=31.57;ReadPosRankSum=2.256;VQSLOD=3.9046;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:26.47:426,26,0	1/1:6,0:6:5.77:115,6,0	0/1:7,2:8:72.38:72,0,152	0/1:15,4:17:99:203,0,116	1/1:17,0:17:4.24:293,4,0	1/1:14,0:14:27.38:479,27,0	1/1:6,0:6:2.65:137,3,0	1/1:6,0:6:15.52:313,16,0	1/1:9,0:9:13.49:293,13,0	1/1:5,0:5:4.69:205,5,0	1/1:11,0:11:14.63:259,15,0	1/1:10,0:10:13.08:409,13,0	1/1:10,0:10:12.74:443,13,0	1/1:17,0:17:29.66:666,30,0	1/1:13,0:13:24.48:447,24,0	1/1:13,0:13:23.18:521,23,0	1/1:12,0:12:21.07:469,21,0	1/1:9,0:9:16.38:348,16,0	1/1:7,0:7:16.46:304,16,0	1/1:8,0:8:20.83:376,21,0	1/1:7,0:7:8.52:149,9,0	1/1:8,0:8:17.89:307,18,0	1/1:8,0:8:9.21:198,9,0	1/1:4,0:4:5.84:141,6,0	1/1:15,0:15:23.32:485,23,0	1/1:10,0:10:16.48:367,16,0	1/1:9,0:9:21.07:445,21,0	./.
chr10	104543122	.	TC	T	1701.60	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=9.274;DP=604;FS=16.646;HRun=10;HaplotypeScore=72.5567;InbreedingCoeff=0.8628;MQ=67.04;MQ0=0;MQRankSum=-1.580;QD=14.06;ReadPosRankSum=-1.478;VQSLOD=1.8297;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,1:49:82.25:0,82,1124	0/0:9,0:9:18.05:0,18,199	0/0:15,0:13:16.79:0,17,244	0/1:17,0:16:10.60:11,0,118	0/0:15,0:15:23.95:0,24,265	0/0:18,0:18:45.12:0,45,498	0/0:28,0:28:45.91:0,46,695	1/1:13,15:28:56.94:489,57,0	0/0:26,1:27:37.12:0,37,634	0/0:14,1:15:10.13:0,10,339	0/0:15,0:15:36.04:0,36,377	0/0:33,0:33:87.20:0,87,942	0/0:19,0:19:39.09:0,39,420	0/0:19,0:20:53.98:0,54,578	0/0:23,0:23:57.15:0,57,631	0/0:28,0:28:69.19:0,69,763	0/0:32,2:34:33:0,33,812	0/0:17,1:18:18.97:0,19,421	1/1:5,9:14:26.99:234,27,0	1/1:5,13:18:35.98:312,36,0	1/1:8,19:27:47.98:417,48,0	0/0:12,0:12:33.09:0,33,365	0/0:17,0:17:42.10:0,42,454	0/0:27,0:27:31.31:0,31,570	0/0:15,1:16:7.04:0,7,306	0/0:26,1:27:34.08:0,34,570	1/1:1,16:16:47.99:417,48,0	0/0:18,0:18:48.05:0,48,498
chr10	104543181	.	G	GGAAGGT	9552.12	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=1.558;DP=619;FS=2.895;HRun=0;HaplotypeScore=132.1185;InbreedingCoeff=0.9980;MQ=68.47;MQ0=0;MQRankSum=-14.533;QD=83.06;ReadPosRankSum=-3.579;VQSLOD=5.2224;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,2685	0/0:12,0:12:33.11:0,33,812	0/0:27,0:27:75.24:0,75,1742	0/0:24,0:22:56.86:0,57,1300	0/0:14,0:14:42.14:0,42,1020	0/0:24,0:24:72.25:0,72,1759	0/0:28,0:28:78.27:0,78,1839	1/1:8,16:28:81.27:2736,81,0	0/0:22,0:22:66.21:0,66,1576	0/0:25,0:25:75.26:0,75,1800	0/0:18,0:18:54.15:0,54,1226	0/0:32,0:32:96.28:0,96,2253	0/0:19,0:19:57.18:0,57,1321	0/0:22,0:22:66.20:0,66,1575	0/0:19,0:19:54.16:0,54,1233	0/0:25,0:24:75.23:0,75,1726	0/0:23,0:23:69.20:0,69,1555	0/0:14,0:14:39.09:0,39,906	1/1:4,8:15:45.15:1446,45,0	1/1:7,20:28:74.98:2140,75,0	1/1:11,8:19:41.99:1132,42,0	0/0:15,0:15:45.14:0,45,1028	0/0:20,0:20:51.18:0,51,1254	0/0:30,0:30:87.30:0,87,2115	0/0:23,0:23:69.24:0,69,1631	0/0:17,0:17:48.16:0,48,1103	1/1:3,19:24:63.17:2099,63,0	0/0:7,0:7:18.06:0,18,443
chr10	104543745	.	TGGC	T	1440.27	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.586;DP=321;FS=20.978;HRun=0;HaplotypeScore=66.6313;InbreedingCoeff=0.8673;MQ=78.88;MQ0=0;MQRankSum=-5.425;QD=28.24;ReadPosRankSum=2.175;VQSLOD=1.7725;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:26.74:0,27,423	0/0:5,0:5:9.03:0,9,143	0/0:12,0:11:22.59:0,23,275	0/0:10,0:10:25.24:0,25,329	0/0:9,0:9:20.86:0,21,336	1/1:4,13:17:42.02:544,42,0	1/1:0,16:16:32.86:407,33,0	0/0:13,0:13:30.08:0,30,460	0/0:10,0:10:15.04:0,15,251	0/0:6,0:6:12.04:0,12,244	0/0:4,0:4:8.82:0,9,131	0/0:12,0:12:30.10:0,30,656	0/0:16,0:16:36.25:0,36,565	0/0:10,0:10:24.55:0,25,384	0/0:13,0:13:33.08:0,33,646	0/0:8,0:8:21.06:0,21,331	0/0:25,0:25:62.70:0,63,1204	0/0:20,0:19:51.17:0,51,1010	0/0:11,0:11:26.74:0,27,475	0/0:6,0:6:11.92:0,12,214	0/0:27,0:27:60.20:0,60,999	0/0:6,0:6:15.05:0,15,313	0/0:5,0:5:15.02:0,15,241	0/0:11,0:11:21.07:0,21,433	1/1:5,13:18:44.59:631,45,0	0/0:5,0:5:9.03:0,9,167	0/0:12,0:12:35.59:0,36,579	0/0:2,0:2:6.02:0,6,93
chr10	104543757	.	C	CT	884.53	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=6.159;DP=301;FS=27.581;HRun=0;HaplotypeScore=65.4823;InbreedingCoeff=0.7849;MQ=74.76;MQ0=1;MQRankSum=-4.224;QD=18.43;ReadPosRankSum=4.036;VQSLOD=2.7132;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:23.43:0,23,206	0/0:5,0:5:10.22:0,10,75	0/0:10,0:9:4.72:0,5,121	0/0:7,0:7:10.28:0,10,57	0/0:7,0:7:17.93:0,18,139	1/1:4,13:17:36.84:365,37,0	1/1:4,11:15:17.41:243,17,0	0/0:11,0:10:14.93:0,15,132	0/0:11,0:11:8.90:0,9,83	0/0:10,0:10:12.02:0,12,125	0/0:3,0:3:5.96:0,6,46	0/0:14,0:14:27.01:0,27,288	0/0:10,0:10:18.38:0,18,159	0/0:6,0:6:12.44:0,12,99	0/0:13,0:13:32.99:0,33,332	0/0:6,0:6:11.88:0,12,86	0/0:26,0:25:55.33:0,55,478	0/0:21,0:20:53.86:0,54,527	0/0:9,0:9:12.38:0,12,110	0/0:7,0:7:11.93:0,12,93	0/0:24,0:24:53.56:0,54,420	0/0:8,0:8:18.01:0,18,167	0/0:4,0:4:9:0,9,79	0/0:13,0:13:22.66:0,23,210	1/1:4,12:16:44.28:415,44,0	0/0:7,0:7:9.01:0,9,95	0/0:10,0:10:29.81:0,30,238	./.
chr10	104544411	.	GGGA	G	4066.51	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=7.325;DP=355;FS=14.609;HRun=0;HaplotypeScore=57.0671;InbreedingCoeff=0.9772;MQ=85.06;MQ0=1;MQRankSum=-1.948;QD=36.64;ReadPosRankSum=3.214;VQSLOD=3.4044;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:42.05:0,42,563	0/0:5,0:5:14.78:0,15,245	0/0:20,0:19:44.42:0,44,567	0/0:16,0:14:14.34:0,14,365	0/0:7,0:7:17.99:0,18,315	1/1:0,17:17:42.14:654,42,0	1/1:2,10:11:21.07:326,21,0	1/1:0,20:20:50.67:649,51,0	0/0:13,0:13:33.09:0,33,573	0/0:7,0:7:21.04:0,21,393	0/0:8,0:8:12.04:0,12,239	0/0:24,0:24:59.23:0,59,1164	0/0:12,0:12:36.07:0,36,676	0/0:6,0:6:15.01:0,15,265	0/0:9,0:9:24.05:0,24,437	0/0:14,0:14:39.11:0,39,714	0/0:19,0:19:57.18:0,57,1143	0/0:15,0:15:42.14:0,42,848	1/1:0,10:10:30.08:440,30,0	1/1:0,10:9:27.05:390,27,0	1/1:1,16:17:48.16:748,48,0	0/0:7,0:7:15.01:0,15,231	0/0:5,0:5:15.05:0,15,315	0/0:15,0:15:44.77:0,45,811	1/1:0,14:13:30.05:439,30,0	0/0:12,0:12:27.05:0,27,503	1/1:0,11:11:27.09:420,27,0	0/0:12,0:12:33.07:0,33,592
chr10	104544737	.	GAC	G	1199.25	PASS	AC=14;AF=0.280;AN=50;BaseQRankSum=9.101;DP=484;FS=3.496;HRun=0;HaplotypeScore=58.7080;InbreedingCoeff=0.9603;MQ=47.31;MQ0=56;MQRankSum=-8.770;QD=16.66;ReadPosRankSum=-2.166;VQSLOD=2.6127;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:29:45.12:0,45,809	0/0:9,0:8:18.05:0,18,284	./.	./.	0/0:18,0:17:39.13:0,39,701	1/1:3,10:6:18.06:251,18,0	1/1:3,7:6:18.06:251,18,0	1/1:1,12:4:12.04:168,12,0	0/0:19,0:17:33.11:0,33,592	0/0:14,0:13:39.13:0,39,684	0/0:14,0:13:24.08:0,24,427	0/0:21,0:17:33.11:0,33,574	0/0:20,0:18:27.09:0,27,485	0/0:17,0:14:33.11:0,33,593	0/0:27,0:22:42.14:0,42,752	0/0:32,0:28:75.26:0,75,1349	0/0:36,0:32:57.20:0,57,1025	0/0:16,0:15:36.04:0,36,579	1/1:4,9:6:12.04:168,12,0	1/1:1,4:5:9.03:126,9,0	./.	0/0:12,0:11:21.07:0,21,377	0/0:24,0:23:57.05:0,57,1009	0/0:15,0:14:15.05:0,15,270	1/1:1,8:7:18.06:251,18,0	0/0:13,0:12:36.12:0,36,648	1/1:1,7:4:12.04:167,12,0	0/0:27,0:24:48.16:0,48,861
chr10	104544992	.	GAA	G	885.78	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=9.451;DP=451;FS=15.047;HRun=12;HaplotypeScore=72.4921;InbreedingCoeff=0.8125;MQ=53.65;MQ0=7;MQRankSum=-7.878;QD=8.60;ReadPosRankSum=2.744;VQSLOD=0.3489;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:87.22:0,87,1188	0/0:11,1:12:5.57:0,6,436	0/0:8,0:4:9.02:0,9,109	0/0:18,0:10:22.94:0,23,274	0/0:11,0:16:26.50:0,27,304	1/1:11,9:19:26.98:272,27,0	1/1:4,10:14:1.02:143,1,0	1/1:10,6:9:12.19:101,12,0	0/0:8,0:8:15.05:0,15,219	0/0:16,0:16:38.61:0,39,509	0/0:17,0:17:8.67:0,9,424	0/0:18,0:19:38.09:0,38,488	0/0:16,1:16:2.58:0,3,394	0/0:6,0:8:21.01:0,21,270	0/0:16,0:16:42.13:0,42,609	0/0:9,0:12:26.05:0,26,310	0/0:32,0:32:72.19:0,72,1019	0/0:23,1:24:32.10:0,32,815	1/1:7,10:14:13:181,13,0	1/1:1,5:6:8.73:72,9,0	1/1:13,1:14:1.21:28,1,0	0/0:11,0:11:21.03:0,21,270	0/0:11,0:11:18.06:0,18,268	0/0:27,0:29:71.21:0,71,983	1/1:0,6:6:15.03:151,15,0	0/0:23,0:25:68.14:0,68,870	1/1:3,6:8:12:120,12,0	0/0:7,0:7:11.96:0,12,113
chr10	104545009	.	GAA	G	1267.34	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=11.978;DP=476;FS=10.557;HRun=5;HaplotypeScore=83.5009;InbreedingCoeff=0.9359;MQ=69.75;MQ0=2;MQRankSum=-9.121;QD=11.52;ReadPosRankSum=0.634;VQSLOD=-0.2104;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:96.32:0,96,1710	0/0:13,0:13:39.13:0,39,700	0/0:18,0:14:36.55:0,37,528	0/0:21,0:17:44.96:0,45,653	0/0:17,0:17:43.50:0,44,753	1/1:15,1:16:36.63:319,37,0	1/1:15,1:16:25.75:241,26,0	1/1:19,1:16:23.59:184,24,0	0/0:10,0:10:27.09:0,27,494	0/0:18,0:18:54.18:0,54,942	0/0:14,0:14:36.12:0,36,630	0/0:19,0:19:45.15:0,45,784	0/0:16,0:15:42.14:0,42,742	0/0:10,0:10:27.06:0,27,434	0/0:17,0:17:51.17:0,51,914	0/0:11,0:11:30.07:0,30,504	0/0:31,0:31:81.27:0,81,1432	0/0:26,0:26:72.15:0,72,1208	1/1:26,1:22:35.23:305,35,0	1/1:8,1:9:12.73:90,13,0	0/1:7,0:7:1.20:25,0,1	0/0:16,0:16:39.60:0,40,666	0/0:8,0:8:24.07:0,24,399	0/0:31,0:31:87.17:0,87,1396	1/1:8,0:8:19.22:173,19,0	0/0:24,0:24:69.19:0,69,1199	1/1:7,0:7:12.76:128,13,0	0/0:9,0:9:18.02:0,18,292
chr10	104545645	.	T	TTC	8142.99	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=5.061;DP=556;FS=3.677;HRun=0;HaplotypeScore=69.3018;InbreedingCoeff=0.9960;MQ=82.44;MQ0=0;MQRankSum=-2.350;QD=47.90;ReadPosRankSum=0.481;VQSLOD=5.6679;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1629	0/0:9,0:9:27.09:0,27,413	0/0:13,0:13:33.11:0,33,498	0/0:18,0:18:48.12:0,48,674	0/0:9,0:9:27.09:0,27,413	1/1:1,23:24:69.24:1312,69,0	1/1:7,25:32:66.23:1268,66,0	1/1:4,17:19:51.13:870,51,0	0/0:21,0:21:57.18:0,57,851	0/0:15,0:15:39.13:0,39,579	0/0:7,0:7:21.07:0,21,320	0/0:21,0:21:57.19:0,57,870	0/0:18,0:18:51.17:0,51,780	0/0:19,0:19:57.18:0,57,841	0/0:18,0:18:51.17:0,51,781	0/0:25,0:25:72.24:0,72,1102	0/0:48,0:48:99:0,141,2066	0/0:31,0:31:93.32:0,93,1419	1/1:0,15:12:33.11:638,33,0	1/1:1,10:11:30.10:579,30,0	1/1:2,31:34:84.29:1623,84,0	0/0:9,0:9:27.06:0,27,370	0/0:6,0:6:15.05:0,15,228	0/0:28,0:28:81.25:0,81,1215	1/1:0,14:14:42.14:811,42,0	0/0:16,0:16:42.13:0,42,624	1/1:0,19:19:54.19:1043,54,0	0/0:17,0:17:51.16:0,51,756
chr10	104546111	.	TCCGGTGTTGCGGTGGGGTTC	T	8673.79	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.662;DP=524;FS=10.952;HRun=0;HaplotypeScore=262.2461;InbreedingCoeff=0.9907;MQ=82.41;MQ0=0;MQRankSum=-10.067;QD=61.08;ReadPosRankSum=-0.124;VQSLOD=2.9203;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.29:0,93,7582	0/0:6,0:6:15.05:0,15,1099	0/0:12,0:12:36.11:0,36,1890	0/0:26,0:26:57.47:0,57,4750	0/0:11,0:11:30.09:0,30,2500	1/1:4,11:15:24.08:1349,24,0	1/1:4,21:25:36.12:2023,36,0	1/1:5,12:17:35.78:456,36,0	0/0:13,0:13:36.12:0,36,3022	0/0:12,0:12:33.11:0,33,2712	0/0:9,0:9:24.08:0,24,2263	0/0:26,0:26:78.27:0,78,6808	0/0:25,0:25:75.26:0,75,6415	0/0:19,0:19:48.16:0,48,4057	0/0:21,0:21:60.21:0,60,5342	0/0:22,0:22:66.23:0,66,4990	0/0:22,0:22:63.22:0,63,4904	0/0:31,0:31:93.32:0,93,7909	1/1:4,7:11:20.98:617,21,0	1/1:0,9:9:23.82:1192,24,0	1/1:13,23:36:18.06:1011,18,0	0/0:16,0:16:45.15:0,45,3735	0/0:9,0:9:27.09:0,27,2058	0/0:33,0:33:90.31:0,90,8139	1/1:2,9:11:15.05:843,15,0	0/0:19,0:19:54.19:0,54,4673	1/1:4,14:18:22.01:1182,22,0	0/0:16,0:16:45.14:0,45,3207
chr10	104547455	.	T	TG	5727.02	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.877;DP=816;FS=2.960;HRun=3;HaplotypeScore=89.4839;InbreedingCoeff=0.9863;MQ=79.74;MQ0=0;MQRankSum=-0.758;QD=38.96;ReadPosRankSum=-1.368;VQSLOD=4.0801;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,132,1573	0/0:9,0:9:27.08:0,27,323	0/0:28,0:28:75.16:0,75,863	0/0:35,0:35:81.24:0,81,951	0/0:20,0:20:60.18:0,60,720	0/0:17,0:17:48.15:0,48,576	0/0:40,0:40:99:0,111,1332	1/1:1,23:24:69.23:965,69,0	0/0:32,0:32:90.28:0,90,1080	0/0:31,0:31:87.27:0,87,1042	0/0:15,0:15:45.14:0,45,540	0/0:43,0:43:99:0,117,1381	0/0:20,0:20:60.18:0,60,720	0/0:34,0:34:96.29:0,96,1152	0/0:36,0:36:99:0,105,1260	0/0:39,0:39:99:0,108,1296	0/0:43,0:44:99:0,128,1503	0/0:23,0:23:66.16:0,66,776	1/1:4,24:28:75.23:1025,75,0	1/1:0,25:25:75.25:1050,75,0	1/1:1,36:37:99:1470,105,0	0/0:25,0:25:72.21:0,72,852	0/0:29,0:29:81.24:0,81,961	0/0:34,0:34:93.28:0,93,1116	0/0:30,0:30:87.26:0,87,1033	0/0:31,0:31:87.26:0,87,1034	1/1:3,30:33:87.29:1216,87,0	0/0:4,0:4:9.03:0,9,108
chr10	104548740	.	TG	T	2074.68	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=8.284;DP=588;FS=0.968;HRun=6;HaplotypeScore=57.2649;InbreedingCoeff=0.8121;MQ=66.31;MQ0=0;MQRankSum=1.621;QD=23.05;ReadPosRankSum=0.249;VQSLOD=2.7435;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.27:0,84,1088	0/0:8,0:8:21.07:0,21,276	0/0:8,0:7:3.39:0,3,151	0/1:13,0:13:7.13:7,0,154	0/0:19,0:19:54.16:0,54,692	1/1:0,24:24:66.17:709,66,0	1/1:3,32:35:90.20:957,90,0	0/0:28,0:29:69.21:0,69,878	0/0:21,0:21:57.16:0,57,722	0/0:20,0:20:48.16:0,48,627	0/0:18,0:18:48.16:0,48,631	0/0:20,0:20:57.17:0,57,734	0/0:23,0:23:66.19:0,66,837	0/0:22,0:22:66.20:0,66,846	0/0:32,0:31:90.29:0,90,1183	0/0:29,0:29:84.27:0,84,1096	0/0:27,0:27:75.24:0,75,986	0/0:22,0:22:60.18:0,60,775	0/0:15,0:15:39.12:0,39,499	0/0:25,0:25:69.21:0,69,891	0/0:18,0:18:54.18:0,54,709	0/0:21,0:21:63.18:0,63,795	0/0:18,0:18:51.16:0,51,664	0/0:34,0:34:96.31:0,96,1259	1/1:2,16:18:51.13:547,51,0	0/0:14,0:14:33.11:0,33,428	0/0:17,0:17:42.13:0,42,538	0/0:6,0:6:18.06:0,18,237
chr10	104549419	.	CT	C	2310.15	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.205;DP=640;FS=6.230;HRun=2;HaplotypeScore=65.6109;InbreedingCoeff=0.9993;MQ=82.20;MQ0=0;MQRankSum=-1.884;QD=32.09;ReadPosRankSum=0.732;VQSLOD=3.2925;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,2040	0/0:12,0:12:36.12:0,36,539	0/0:22,0:21:57.18:0,57,802	0/0:19,0:19:45.86:0,46,708	0/0:15,0:15:45.14:0,45,656	1/1:0,25:25:69.22:895,69,0	1/1:1,28:29:72.23:935,72,0	0/0:34,0:34:96.32:0,96,1404	0/0:22,0:22:63.20:0,63,924	0/0:22,0:22:66.21:0,66,953	0/0:11,0:11:33.09:0,33,457	0/0:27,0:27:81.25:0,81,1171	0/0:25,0:25:75.23:0,75,1079	0/0:23,0:23:69.16:0,69,952	0/0:24,0:24:72.24:0,72,1079	0/0:25,0:25:75.24:0,75,1104	0/0:37,0:37:99:0,111,1592	0/0:23,0:23:69.23:0,69,1029	0/0:22,0:22:66.21:0,66,969	0/0:9,0:9:27.09:0,27,405	0/0:36,0:36:99:0,108,1593	0/0:17,0:17:45.15:0,45,670	0/0:19,0:19:51.07:0,51,689	0/0:27,0:27:81.27:0,81,1214	1/1:0,18:18:48.16:623,48,0	0/0:25,0:25:72.24:0,72,1074	0/0:15,0:15:45.14:0,45,655	0/0:10,0:10:30.10:0,30,449
chr10	104550163	.	G	GT	1938.40	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.024;DP=637;FS=19.369;HRun=0;HaplotypeScore=76.4798;InbreedingCoeff=0.9962;MQ=82.61;MQ0=1;MQRankSum=-3.894;QD=25.85;ReadPosRankSum=2.374;VQSLOD=2.6173;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1549	0/0:8,0:8:21.06:0,21,276	0/0:29,0:27:70.34:0,70,865	0/0:30,0:27:47.22:0,47,726	0/0:20,0:20:57.19:0,57,787	1/1:3,29:32:75.69:871,76,0	1/1:3,22:25:62.09:715,62,0	0/0:39,0:39:99:0,117,1597	0/0:17,0:17:51.15:0,51,683	0/0:27,0:27:81.24:0,81,1073	0/0:15,0:15:45.13:0,45,602	0/0:23,0:23:69.22:0,69,949	0/0:10,0:10:30.10:0,30,418	0/0:15,0:15:45.14:0,45,613	0/0:24,0:24:72.23:0,72,984	0/0:28,0:28:84.26:0,84,1128	0/0:33,0:33:99:0,99,1365	0/0:25,0:25:75.22:0,75,1023	0/0:18,0:18:54.17:0,54,736	0/0:17,0:17:48.14:0,48,632	0/0:22,0:22:66.22:0,66,920	0/0:27,0:27:81.22:0,81,1076	0/0:16,0:16:45.14:0,45,612	0/0:30,0:30:90.29:0,90,1241	1/1:1,17:18:20.12:494,20,0	0/0:26,0:26:78.16:0,78,994	0/0:16,0:16:48.16:0,48,664	0/0:9,0:9:27.04:0,27,337
chr10	104550651	.	CTT	C	3960.25	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=13.173;DP=795;FS=0.000;HRun=2;HaplotypeScore=98.8980;InbreedingCoeff=0.9993;MQ=66.84;MQ0=0;MQRankSum=2.039;QD=45.52;ReadPosRankSum=2.066;VQSLOD=3.4982;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,169,3315	0/0:16,0:16:48.16:0,48,951	0/0:32,0:25:72.16:0,72,1295	0/0:25,0:24:66.22:0,66,1275	0/0:30,0:30:90.30:0,90,1790	1/1:0,30:30:84.29:1370,84,0	1/1:0,30:30:87.30:1415,87,0	0/0:36,0:36:99:0,108,2139	0/0:30,0:30:90.31:0,90,1829	0/0:34,0:34:99:0,102,2041	0/0:9,0:9:24.08:0,24,488	0/0:25,0:25:75.26:0,75,1524	0/0:27,0:27:81.28:0,81,1625	0/0:20,0:20:60.21:0,60,1218	0/0:41,0:41:99:0,123,2482	0/0:39,0:39:99:0,117,2290	0/0:26,0:26:78.27:0,78,1582	0/0:20,0:20:60.16:0,60,1165	0/0:28,0:28:84.29:0,84,1703	0/0:25,0:24:72.23:0,72,1416	0/0:40,0:40:99:0,117,2340	0/0:21,0:21:63.20:0,63,1244	0/0:24,0:24:69.24:0,69,1401	0/0:30,0:30:90.27:0,90,1788	1/1:0,27:27:72.25:1175,72,0	0/0:32,0:32:96.32:0,96,1917	0/0:25,0:25:75.26:0,75,1522	0/0:17,0:17:51.18:0,51,1036
chr10	104552023	.	G	GT	9357.28	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=19.462;DP=742;FS=1.658;HRun=1;HaplotypeScore=104.6612;InbreedingCoeff=0.9992;MQ=80.88;MQ0=0;MQRankSum=-2.711;QD=40.86;ReadPosRankSum=-3.649;VQSLOD=3.7237;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,150,1947	0/0:7,0:7:21.07:0,21,273	0/0:16,0:16:42.11:0,42,504	0/0:23,0:23:40.18:0,40,664	0/0:23,0:23:66.18:0,66,856	1/1:0,18:18:51.17:763,51,0	1/1:4,30:34:93.27:1368,93,0	1/1:0,29:29:87.27:1279,87,0	0/0:27,0:27:81.21:0,81,1005	0/0:28,0:28:81.26:0,81,1042	0/0:16,0:16:45.15:0,45,584	0/0:42,0:42:99:0,123,1597	0/0:21,0:21:60.20:0,60,779	0/0:31,0:31:93.30:0,93,1207	0/0:27,0:27:81.25:0,81,1038	0/0:32,0:32:96.31:0,96,1246	0/0:36,0:36:99:0,102,1308	0/0:21,0:21:63.20:0,63,818	1/1:3,26:30:81.19:1124,81,0	1/1:0,14:14:39.05:535,39,0	1/1:1,60:61:99:2426,162,0	0/0:25,0:25:75.24:0,75,974	0/0:18,0:18:51.17:0,51,662	0/0:31,0:31:93.30:0,93,1206	1/1:1,26:27:81.23:1188,81,0	0/0:28,0:28:81.23:0,81,1034	1/1:0,16:16:45.15:674,45,0	0/0:10,0:10:30.10:0,30,390
chr10	104552857	.	G	GTTAA	2217.86	PASS	AC=16;AF=0.308;AN=52;BaseQRankSum=-2.023;DP=362;FS=0.659;HRun=0;HaplotypeScore=57.4659;InbreedingCoeff=0.7809;MQ=62.31;MQ0=0;MQRankSum=-1.813;QD=20.54;ReadPosRankSum=-0.854;VQSLOD=3.1536;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:69.19:0,69,1099	0/0:14,0:14:33.09:0,33,494	./.	./.	0/0:12,0:12:27.07:0,27,395	1/1:4,21:25:54.19:1319,54,0	1/1:3,4:7:6.02:147,6,0	1/1:37,0:37:23.93:226,24,0	0/0:9,0:9:15.05:0,15,248	0/0:14,0:14:30.10:0,30,476	0/0:13,0:13:36.10:0,36,544	0/0:13,0:13:21.07:0,21,342	0/0:10,0:10:15.03:0,15,223	0/0:4,0:4:3.01:0,3,50	0/0:14,0:14:33.08:0,33,488	0/0:14,0:14:33.11:0,33,542	0/0:31,0:31:69.08:0,69,1044	0/0:20,0:20:48.11:0,48,741	1/1:10,0:11:3.01:53,3,0	1/1:6,0:7:6.02:103,6,0	1/1:3,0:3:3.01:43,3,0	0/0:9,0:9:3.01:0,3,50	0/0:9,0:9:12.04:0,12,199	0/0:5,0:5:3.01:0,3,48	1/1:1,6:8:12.04:293,12,0	0/0:16,0:16:42.13:0,42,655	1/1:3,0:10:12.04:211,12,0	0/0:5,0:5:9.03:0,9,149
chr10	104552960	.	CT	C	717.09	PASS	AB=0.836;AC=13;AF=0.232;AN=56;BaseQRankSum=6.894;DP=428;FS=1.293;HRun=12;HaplotypeScore=81.8113;InbreedingCoeff=0.3101;MQ=65.44;MQ0=10;MQRankSum=-5.097;QD=4.66;ReadPosRankSum=2.404;VQSLOD=1.8525;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:38.76:0,39,348	0/0:8,0:8:21.48:0,21,196	0/0:31,1:13:0.49:0,0,115	0/1:25,1:16:10.18:10,0,105	0/0:17,0:17:21.05:0,21,184	0/1:11,4:14:29.15:65,0,29	0/1:6,3:9:6.18:53,0,6	1/1:10,10:17:21.54:231,22,0	0/0:14,0:14:27.82:0,28,226	0/0:16,0:16:32.26:0,32,274	0/1:23,0:23:5.15:5,0,305	0/0:14,0:14:29.75:0,30,258	0/0:5,0:5:12.02:0,12,121	0/0:14,0:14:0.82:0,1,179	0/0:21,0:19:31.89:0,32,350	0/0:15,0:15:26.08:0,26,244	0/0:25,0:25:51.09:0,51,465	0/0:18,0:18:36.01:0,36,291	0/1:4,4:7:5.01:54,0,5	1/1:8,3:11:2.95:111,3,0	0/1:3,0:3:0.01:0,0,0	0/0:2,0:2:5.88:0,6,45	0/0:10,0:9:14.94:0,15,129	0/0:12,0:12:25.59:0,26,239	1/1:10,11:18:11.34:191,11,0	0/0:20,0:19:25.74:0,26,234	0/1:9,8:17:20.60:147,0,21	0/0:10,0:10:26.90:0,27,233
chr10	104553073	.	G	GTACCA	5872.07	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=3.202;DP=537;FS=7.206;HRun=0;HaplotypeScore=91.8489;InbreedingCoeff=0.9769;MQ=71.92;MQ0=0;MQRankSum=-10.027;QD=50.19;ReadPosRankSum=-1.149;VQSLOD=4.4426;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,166,3253	0/0:8,0:8:21.07:0,21,393	0/0:12,0:12:26.28:0,26,550	0/0:17,0:17:41.97:0,42,743	0/0:15,0:15:42.13:0,42,805	1/1:4,18:24:51.18:1548,51,0	1/1:2,14:24:36.12:1093,36,0	1/1:4,9:14:30.09:760,30,0	0/0:19,0:19:57.10:0,57,1047	0/0:17,0:17:48.15:0,48,933	0/0:14,0:14:36.11:0,36,699	0/0:35,0:35:99:0,99,1992	0/0:10,0:10:30.10:0,30,599	0/0:23,0:23:69.22:0,69,1377	0/0:25,0:25:75.24:0,75,1499	0/0:15,0:15:45.15:0,45,892	0/0:44,0:44:99:0,129,2518	0/0:25,0:25:72.19:0,72,1337	1/1:1,7:11:29.90:466,30,0	1/1:0,5:5:6.02:182,6,0	1/1:7,7:16:20.94:637,21,0	0/0:10,0:10:30.07:0,30,574	0/0:12,0:12:33.10:0,33,638	0/0:33,0:33:96.31:0,96,1899	1/1:0,7:8:18.06:547,18,0	0/0:22,0:22:63.19:0,63,1211	1/1:2,11:15:21.07:639,21,0	0/0:6,0:6:18.06:0,18,369
chr10	104554795	.	TACTGACGGC	T	1225.45	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.605;DP=312;FS=10.078;HRun=0;HaplotypeScore=91.4423;InbreedingCoeff=0.8645;MQ=104.92;MQ0=0;MQRankSum=-6.335;QD=68.08;ReadPosRankSum=-0.189;VQSLOD=3.0147;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.22:0,63,2842	0/0:3,0:3:9.03:0,9,355	0/0:20,0:20:51.01:0,51,2036	0/0:21,0:21:54.16:0,54,1935	0/0:6,0:6:15.05:0,15,708	1/1:0,4:4:12.04:362,12,0	1/1:1,7:8:21.07:635,21,0	0/0:19,0:19:45.15:0,45,2006	0/0:13,0:13:33.11:0,33,1545	0/0:14,0:14:39.13:0,39,1705	0/0:6,0:6:18.06:0,18,759	0/0:12,0:12:36.12:0,36,1684	0/0:6,0:6:18.05:0,18,743	0/0:13,0:13:30.10:0,30,1285	0/0:19,0:19:57.20:0,57,2641	0/0:9,0:9:24.08:0,24,1155	0/0:18,0:18:54.19:0,54,2532	0/0:12,0:12:33.11:0,33,1593	0/0:9,0:9:21.05:0,21,666	0/0:4,0:4:9.03:0,9,435	0/0:21,0:21:45.15:0,45,2172	0/0:6,0:6:15.05:0,15,630	0/0:3,0:3:6.02:0,6,290	0/0:15,0:15:42.14:0,42,1871	1/1:1,5:6:12.04:362,12,0	0/0:9,0:9:27.09:0,27,1293	0/0:11,0:11:18.06:0,18,868	0/0:4,0:4:9.03:0,9,433
chr10	104554855	.	C	CGTCG	297.39	PASS	AB=1.000;AC=11;AF=0.229;AN=48;BaseQRankSum=0.116;DP=138;FS=0.000;HRun=0;HaplotypeScore=42.3919;InbreedingCoeff=0.5278;MQ=91.77;MQ0=0;MQRankSum=-4.006;QD=10.25;ReadPosRankSum=0.407;VQSLOD=1.9945;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:9.03:0,9,165	./.	0/0:10,0:7:11.99:0,12,160	0/0:14,0:9:15.44:0,15,208	0/1:1,0:1:0:0,0,0	./.	1/1:10,0:12:0.35:96,0,0	1/1:2,0:2:6.02:116,6,0	0/0:6,0:6:15.52:0,16,286	0/0:3,0:3:6.02:0,6,96	0/0:3,0:3:9.03:0,9,165	0/0:5,0:5:11.78:0,12,166	0/0:5,0:5:8.96:0,9,84	0/0:4,0:4:5.93:0,6,81	0/0:2,0:2:6.02:0,6,101	0/0:4,0:4:12.04:0,12,225	0/0:18,0:18:52.42:0,52,979	0/0:10,0:10:20.64:0,21,300	1/1:2,0:4:1.03:49,1,0	./.	0/0:4,2:8:0:0,0,0	./.	0/0:1,0:1:1.82:0,2,5	0/0:3,0:3:8.99:0,9,143	1/1:2,0:2:2.38:46,2,0	0/0:3,0:3:6.02:0,6,91	1/1:1,4:7:5.84:112,6,0	0/0:2,0:2:6.02:0,6,120
chr10	104556054	.	AG	A	8290.17	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.860;DP=758;FS=0.621;HRun=1;HaplotypeScore=82.3357;InbreedingCoeff=0.9978;MQ=63.06;MQ0=1;MQRankSum=-0.578;QD=35.43;ReadPosRankSum=0.318;VQSLOD=4.8351;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:87.17:0,87,1149	0/0:7,0:7:21.04:0,21,262	0/0:17,0:16:45.11:0,45,597	0/0:7,0:7:17.97:0,18,212	0/0:33,0:33:99:0,99,1330	1/1:1,21:22:54.17:739,54,0	1/1:1,28:29:62.84:915,63,0	1/1:0,33:33:99:1274,99,0	0/0:35,0:35:84.16:0,84,1030	0/0:40,0:40:99:0,120,1605	0/0:22,0:22:66.17:0,66,870	0/0:24,0:24:69.23:0,69,985	0/0:32,0:32:90.29:0,90,1266	0/0:29,0:29:81.22:0,81,1105	0/0:50,0:50:99:0,141,1901	0/0:45,0:45:99:0,126,1660	0/0:13,0:13:39.10:0,39,515	0/0:10,0:10:27.09:0,27,385	1/1:7,15:22:66.15:832,66,0	1/1:0,36:36:99:1361,102,0	1/1:7,21:28:78.11:958,78,0	0/0:20,0:20:60.17:0,60,817	0/0:24,0:24:69.13:0,69,891	0/0:19,0:19:54.16:0,54,750	1/1:0,24:24:57.15:773,57,0	0/0:31,0:31:87.26:0,87,1211	1/1:1,39:40:99:1437,105,0	0/0:32,0:32:93.21:0,93,1227
chr10	104556101	.	GTGTGTGTGCATATATGTATGTA	G	1770.80	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=4.626;DP=970;FS=1.532;HRun=0;HaplotypeScore=492.6926;InbreedingCoeff=0.8112;MQ=60.19;MQ0=6;MQRankSum=-3.053;QD=7.84;ReadPosRankSum=0.327;VQSLOD=0.3661;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:0.57:0,1,1764	0/0:14,0:14:39.11:0,39,2178	0/0:47,0:23:2.90:0,3,16	0/0:44,0:26:2.68:0,3,11	0/0:33,0:33:36.09:0,36,2087	1/1:15,0:15:3.01:46,3,0	1/1:23,0:23:6:70,6,0	1/1:55,0:55:24.01:214,24,0	0/0:38,0:39:63.14:0,63,3839	0/0:66,0:66:99:0,129,6959	0/0:25,0:25:42.12:0,42,2172	0/0:27,0:27:48.15:0,48,3475	0/0:37,0:37:57.15:0,57,3205	0/0:38,0:38:55.64:0,56,4158	0/0:56,0:56:90.22:0,90,5305	0/0:74,0:74:99:0,123,7856	0/0:17,0:18:21.78:0,22,1508	0/0:19,0:20:26.10:0,26,2500	1/1:14,1:14:15.03:389,15,0	1/1:19,2:21:2.98:46,3,0	1/1:37,0:35:12.03:258,12,0	0/0:30,0:30:48.14:0,48,3278	0/0:23,0:23:36.09:0,36,2173	0/0:37,0:37:60.15:0,60,3511	1/1:21,2:23:11.64:438,12,0	0/0:46,0:45:81.27:0,81,5671	1/1:35,2:34:21.07:494,21,0	0/0:35,0:35:57.12:0,57,2040
chr10	104556121	.	GTA	G	366.42	PASS	AB=0.879;AC=5;AF=0.089;AN=56;BaseQRankSum=6.515;DP=955;FS=14.022;HRun=0;HaplotypeScore=152.6857;InbreedingCoeff=-0.0983;MQ=56.47;MQ0=7;MQRankSum=-1.080;QD=2.98;ReadPosRankSum=-3.397;VQSLOD=1.2573;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,1:40:64.70:0,65,1567	0/0:19,0:19:57.19:0,57,1067	0/0:39,0:12:26.61:0,27,416	0/0:44,0:16:38.11:0,38,447	0/0:30,0:30:84.25:0,84,1540	0/0:11,2:13:21.06:0,21,372	0/1:14,2:16:44.99:45,0,269	0/0:27,0:26:75.18:0,75,1282	0/0:40,0:41:86.24:0,86,1773	0/0:73,0:72:99:0,214,3788	0/0:27,0:27:72.70:0,73,1307	0/0:31,0:31:93.30:0,93,1668	0/0:33,0:33:93.28:0,93,1701	0/0:48,0:47:99:0,132,2296	0/0:63,0:63:99:0,168,2974	0/0:72,0:72:99:0,183,3228	0/0:21,0:21:57.57:0,58,939	0/0:24,1:25:49.14:0,49,1154	0/1:11,2:12:94.13:94,0,323	0/0:14,0:14:18.06:0,18,339	0/1:36,4:38:99:186,0,493	0/0:31,0:31:90.29:0,90,1665	0/0:20,0:20:57.12:0,57,896	0/0:35,2:37:90.24:0,90,1598	0/1:18,8:26:99:139,0,254	0/0:49,0:48:99:0,144,2578	0/1:27,1:25:19.36:19,0,692	0/0:32,0:32:96.30:0,96,1744
chr10	104556143	.	GTA	G	719.51	PASS	AB=0.871;AC=8;AF=0.143;AN=56;BaseQRankSum=4.198;DP=988;FS=2.321;HRun=0;HaplotypeScore=156.5274;InbreedingCoeff=-0.1671;MQ=56.06;MQ0=8;MQRankSum=-1.685;QD=3.87;ReadPosRankSum=-3.304;VQSLOD=2.5095;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:97.02:0,97,1822	0/0:22,0:22:66.20:0,66,1208	0/0:31,0:10:16.48:0,16,200	0/0:42,0:18:35.20:0,35,743	0/0:22,0:22:57.14:0,57,978	0/1:11,1:12:30.82:31,0,179	0/1:17,4:21:24.72:25,0,579	0/1:29,0:28:99:133,0,978	0/0:46,0:47:99:0,129,2108	0/0:73,0:73:99:0,217,3866	0/0:32,0:32:84.73:0,85,1562	0/0:33,0:33:96.31:0,96,1797	0/0:32,0:32:93.26:0,93,1652	0/0:45,0:45:99:0,126,2275	0/0:72,0:72:99:0,208,3741	0/0:71,0:71:99:0,185,3486	0/0:23,0:23:60.65:0,61,1103	0/0:29,0:29:60.60:0,61,1329	0/1:13,3:12:99:163,0,332	0/1:7,1:8:33.84:34,0,162	0/1:38,7:44:88.49:88,0,1046	0/0:31,0:31:93.29:0,93,1702	0/0:27,0:27:78.23:0,78,1366	0/0:42,0:42:99:0,108,1960	0/1:22,3:25:99:121,0,461	0/0:53,0:53:99:0,160,2913	0/1:18,12:27:99:261,0,495	0/0:31,0:31:93.25:0,93,1680
chr10	104556273	.	GT	G	11744.42	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=18.804;DP=1201;FS=0.240;HRun=2;HaplotypeScore=138.0308;InbreedingCoeff=0.9986;MQ=61.99;MQ0=3;MQRankSum=-0.122;QD=35.59;ReadPosRankSum=-2.669;VQSLOD=3.7345;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:63,1:64:99:0,176,2629	0/0:8,0:8:21.03:0,21,290	0/0:21,0:17:20.69:0,21,442	0/0:32,0:27:68.24:0,68,911	0/0:20,0:20:36.12:0,36,539	1/1:0,25:25:66.21:856,66,0	1/1:0,48:48:99:1675,129,0	1/1:1,47:48:99:1815,141,0	0/0:67,0:67:99:0,199,2925	0/0:64,0:64:99:0,190,2810	0/0:21,0:21:57.14:0,57,809	0/0:63,0:63:99:0,187,2767	0/0:53,0:53:99:0,160,2356	0/0:57,0:57:99:0,172,2540	0/0:99,0:99:99:0,292,4341	0/0:73,0:73:99:0,211,3129	0/0:25,0:25:75.25:0,75,1124	0/0:22,0:22:59.85:0,60,897	1/1:0,16:15:45.15:584,45,0	1/1:0,20:20:51.17:661,51,0	1/1:1,113:114:99:3973,307,0	0/0:30,0:30:75.25:0,75,1124	0/0:30,0:30:75.73:0,76,1122	0/0:42,0:42:99:0,126,1889	1/1:0,27:27:78.25:1013,78,0	0/0:50,0:50:99:0,147,2168	1/1:2,30:32:90.29:1166,90,0	0/0:29,0:30:75.24:0,75,1099
chr10	104556481	.	C	CGTGTGTGT	3697.92	PASS	AB=0.587;AC=15;AF=0.268;AN=56;BaseQRankSum=6.838;DP=1138;FS=4.737;HRun=0;HaplotypeScore=293.0242;InbreedingCoeff=0.8418;MQ=56.26;MQ0=9;MQRankSum=-2.652;QD=10.91;ReadPosRankSum=-6.377;VQSLOD=1.0073;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:45:87.26:0,87,2041	0/0:16,0:18:47.15:0,47,927	1/1:37,0:5:2.69:8,3,0	0/0:38,0:9:11.80:0,12,162	0/0:25,0:27:47.68:0,48,957	0/0:11,1:28:0.33:0,0,1	1/1:20,21:53:1.38:489,1,0	1/1:30,0:30:31.77:402,32,0	0/0:51,0:55:99:0,132,3030	0/0:45,0:48:99:0,101,2129	0/0:19,0:20:30.05:0,30,599	0/0:56,0:56:84.48:0,84,2032	0/0:36,0:39:63.10:0,63,1458	0/0:55,0:58:64.28:0,64,2466	0/0:69,0:73:99:0,150,3167	0/0:49,0:55:99:0,141,2922	0/0:41,0:44:95.60:0,96,2056	0/0:37,0:39:68.67:0,69,1973	1/1:16,0:26:47.60:690,48,0	0/1:8,0:27:1.65:185,0,2	1/1:100,0:107:81.51:887,82,0	0/0:23,0:27:56.35:0,56,1113	0/0:17,0:17:35.90:0,36,717	0/0:53,0:53:99:0,108,2643	1/1:11,3:37:19.46:710,19,0	0/0:36,0:42:73.06:0,73,2002	1/1:7,0:20:17.65:325,18,0	0/0:16,0:16:24.07:0,24,518
chr10	104557013	.	T	TAA	3895.79	PASS	AB=0.500;AC=15;AF=0.268;AN=56;BaseQRankSum=-3.225;DP=565;FS=9.467;HRun=1;HaplotypeScore=139.5959;InbreedingCoeff=0.9415;MQ=56.66;MQ0=15;MQRankSum=0.182;QD=28.03;ReadPosRankSum=-3.399;VQSLOD=1.4377;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:36.05:0,36,507	0/0:5,0:5:9.03:0,9,109	0/0:27,0:12:36.10:0,36,519	0/0:40,0:24:54.22:0,54,976	0/0:15,0:15:26.75:0,27,372	1/1:18,0:18:51.05:729,51,0	1/1:10,0:10:18.52:229,19,0	1/1:0,23:25:75.14:1192,75,0	0/0:21,0:20:26.79:0,27,354	0/0:14,0:14:39.03:0,39,539	0/0:14,0:14:15.05:0,15,222	0/0:22,0:22:37.62:0,38,450	0/0:17,0:17:41.22:0,41,552	0/0:9,0:9:8.71:0,9,100	0/0:23,0:23:26.97:0,27,369	0/0:29,0:29:56.54:0,57,816	0/0:30,0:30:65.74:0,66,923	0/0:21,0:20:60.15:0,60,806	1/1:21,0:20:44.31:628,44,0	0/1:0,11:12:0:0,0,0	1/1:25,0:25:21.04:332,21,0	0/0:14,0:14:20.75:0,21,299	0/0:17,0:17:33.08:0,33,428	0/0:26,0:26:48.11:0,48,677	1/1:17,0:17:36.11:572,36,0	0/0:37,0:36:96.82:0,97,1270	1/1:10,1:11:20.61:213,21,0	0/0:10,0:10:30.09:0,30,403
chr10	104557562	.	CT	C	1577.71	PASS	AB=0.833;AC=17;AF=0.304;AN=56;BaseQRankSum=2.277;DP=283;FS=10.155;HRun=9;HaplotypeScore=50.4752;InbreedingCoeff=0.8641;MQ=58.18;MQ0=1;MQRankSum=-3.705;QD=19.24;ReadPosRankSum=2.077;VQSLOD=3.5774;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:30.09:0,30,346	0/0:7,0:7:21.02:0,21,227	0/0:14,0:10:21.04:0,21,224	0/0:12,0:8:18.52:0,19,206	0/0:14,1:16:8.47:0,8,258	1/1:2,9:11:27.01:247,27,0	1/1:0,9:9:21.01:192,21,0	1/1:4,11:14:36:324,36,0	0/0:10,0:9:24.06:0,24,267	0/0:17,0:17:42.07:0,42,461	0/0:12,1:13:2.40:0,2,234	0/0:10,0:10:24.03:0,24,262	0/0:7,0:7:18.05:0,18,208	0/0:7,0:6:15.04:0,15,173	0/0:14,0:14:39.12:0,39,450	0/0:13,0:13:33.10:0,33,381	0/1:4,1:5:6.34:6,0,92	0/0:9,0:9:21.06:0,21,242	1/1:1,7:7:21.01:192,21,0	1/1:2,6:8:21:188,21,0	1/1:0,4:4:12.01:110,12,0	0/0:7,0:7:18.05:0,18,208	0/0:5,0:5:12.04:0,12,138	0/0:6,0:6:15.04:0,15,173	1/1:1,14:15:42.02:384,42,0	0/0:14,1:15:42.04:0,42,446	1/1:0,7:6:15.01:137,15,0	0/0:6,0:6:18.05:0,18,207
chr10	104558779	.	TAAAA	T	3566.04	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.085;DP=582;FS=0.914;HRun=15;HaplotypeScore=105.6836;InbreedingCoeff=0.9928;MQ=68.83;MQ0=1;MQRankSum=-6.949;QD=24.26;ReadPosRankSum=3.658;VQSLOD=2.9198;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:39:99:0,102,2200	0/0:14,0:17:36.12:0,36,765	0/0:30,0:16:24.05:0,24,405	0/0:25,0:17:20.97:0,21,298	0/0:18,0:23:57.11:0,57,1058	1/1:2,10:12:24.01:327,24,0	1/1:5,19:25:43.32:570,43,0	1/1:10,16:26:47.97:634,48,0	0/0:18,0:17:39.13:0,39,836	0/0:15,0:18:36.11:0,36,733	0/0:15,0:17:42.13:0,42,895	0/0:8,0:12:24.08:0,24,481	0/0:14,0:17:39.13:0,39,803	0/0:18,0:21:42.14:0,42,932	0/0:19,0:21:39.13:0,39,812	0/0:17,0:18:42.14:0,42,834	0/0:23,0:25:72.25:0,72,1511	0/0:19,0:25:60.20:0,60,1245	1/1:6,7:14:23.97:309,24,0	1/1:4,14:18:41.85:541,42,0	1/1:5,9:14:12.89:201,13,0	0/0:16,0:19:39.13:0,39,790	0/0:18,0:19:42.14:0,42,838	0/0:24,0:30:57.18:0,57,1143	1/1:2,14:18:36.07:450,36,0	0/0:22,0:26:63.16:0,63,1198	1/1:3,16:20:40.35:535,40,0	0/0:11,0:14:21.07:0,21,395
chr10	104559962	.	A	AAC	9135.35	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-13.301;DP=678;FS=11.531;HRun=0;HaplotypeScore=80.8861;InbreedingCoeff=0.9998;MQ=84.43;MQ0=0;MQRankSum=-1.682;QD=45.91;ReadPosRankSum=0.179;VQSLOD=5.5863;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,1486	0/0:17,0:17:48.16:0,48,688	0/0:24,0:24:66.19:0,66,885	0/0:29,0:28:74.97:0,75,991	0/0:33,0:33:87.25:0,87,1192	1/1:0,22:22:63.21:1118,63,0	1/1:1,15:16:36.12:656,36,0	1/1:2,18:20:54.16:930,54,0	0/0:18,0:18:51.15:0,51,710	0/0:30,0:30:87.29:0,87,1246	0/0:15,0:15:45.14:0,45,627	0/0:24,0:24:72.16:0,72,988	0/0:22,0:22:63.19:0,63,866	0/0:18,0:18:45.15:0,45,645	0/0:27,0:27:78.17:0,78,1056	0/0:34,0:34:99:0,102,1461	0/0:36,0:36:99:0,108,1529	0/0:22,0:22:63.16:0,63,862	1/1:2,22:25:69.20:1174,69,0	1/1:0,16:16:39.13:714,39,0	1/1:3,46:49:99:2125,117,0	0/0:11,0:11:27.08:0,27,369	0/0:18,0:18:51.15:0,51,711	0/0:23,0:23:63.17:0,63,847	1/1:0,24:24:63.22:1155,63,0	0/0:19,0:19:57.16:0,57,796	1/1:2,25:27:69.24:1264,69,0	0/0:20,0:20:57.17:0,57,798
chr10	104560166	.	G	GTGTGTGACCCC	14177.19	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-8.196;DP=529;FS=6.287;HRun=0;HaplotypeScore=156.2999;InbreedingCoeff=0.9875;MQ=72.98;MQ0=1;MQRankSum=-12.300;QD=126.58;ReadPosRankSum=0.103;VQSLOD=5.2741;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,3962	0/0:13,0:13:39.13:0,39,1442	0/0:12,0:12:9.28:0,9,928	0/0:12,0:12:20.11:0,20,703	0/0:24,0:24:66.23:0,66,2264	1/1:0,13:15:39.13:2304,39,0	1/1:2,13:16:42.14:2354,42,0	1/1:7,6:16:48.16:2305,48,0	0/0:11,0:11:30.10:0,30,1083	0/0:26,0:26:78.26:0,78,2538	0/0:16,0:16:45.14:0,45,1470	0/0:20,0:20:60.21:0,60,1955	0/0:18,0:18:54.17:0,54,1859	0/0:16,0:16:48.12:0,48,1511	0/0:32,0:32:90.31:0,90,3139	0/0:22,0:22:63.22:0,63,2276	0/0:39,0:39:99:0,111,3994	0/0:20,0:20:57.20:0,57,1986	1/1:2,4:9:27.09:989,27,0	1/1:3,11:15:33.11:1787,33,0	1/1:3,3:11:18.06:1063,18,0	0/0:12,0:12:30.10:0,30,1099	0/0:19,0:19:54.17:0,54,1761	0/0:20,0:20:60.21:0,60,2156	1/1:6,10:18:39.13:2268,39,0	0/0:21,0:21:60.21:0,60,1925	1/1:3,6:9:21.07:1105,21,0	0/0:24,0:24:72.25:0,72,2421
chr10	104560265	.	ATG	A	536.23	PASS	AB=0.923;AC=15;AF=0.300;AN=50;BaseQRankSum=4.671;DP=623;FS=0.000;HRun=0;HaplotypeScore=84.7472;InbreedingCoeff=-0.1341;MQ=63.00;MQ0=7;MQRankSum=1.694;QD=1.78;ReadPosRankSum=1.190;VQSLOD=1.5184;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,1:34:36.19:36,0,301	0/1:15,0:15:5.14:5,0,57	./.	./.	0/0:34,0:34:18.06:0,18,252	1/1:8,5:13:8.15:96,8,0	0/1:21,6:26:68.08:142,0,68	0/0:14,0:13:5.98:0,6,58	0/1:21,0:21:47.18:47,0,157	0/0:21,0:21:9.03:0,9,131	0/0:22,0:22:14.60:0,15,223	0/1:18,2:20:47.20:47,0,144	0/0:13,0:13:9.03:0,9,134	0/1:15,2:17:53.22:53,0,75	0/1:23,1:24:5.54:6,0,327	0/1:25,3:26:29.17:29,0,366	0/0:33,1:33:12.50:0,13,546	0/1:27,3:30:52.72:53,0,482	./.	0/0:26,0:31:8.49:0,8,50	0/0:19,0:19:6.02:0,6,85	0/0:16,0:16:3.01:0,3,43	0/1:16,1:17:23.59:24,0,74	0/0:14,0:25:27.03:0,27,285	1/1:22,3:26:11.87:112,12,0	0/0:26,0:25:9.48:0,9,98	0/0:21,0:18:3.93:0,4,24	0/1:25,2:25:35.16:35,0,320
chr10	104560473	.	GGT	G	77.54	PASS	AB=0.952;AC=9;AF=0.237;AN=38;BaseQRankSum=3.172;DP=540;FS=2.851;HRun=0;HaplotypeScore=96.5794;InbreedingCoeff=-0.0068;MQ=61.54;MQ0=24;MQRankSum=0.802;QD=0.43;ReadPosRankSum=2.132;VQSLOD=1.2520;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:26:25.81:26,0,35	0/0:6,0:6:3.01:0,3,43	./.	./.	0/0:8,0:8:2.99:0,3,24	./.	1/1:29,0:29:2.43:13,2,0	./.	0/1:21,0:21:13.63:14,0,149	0/0:19,0:19:7.38:0,7,91	0/0:10,0:10:0:0,0,0	0/0:17,0:17:3.01:0,3,43	0/0:9,0:9:17.21:0,17,182	0/0:14,0:14:6.02:0,6,77	0/0:16,1:17:14.88:0,15,183	0/0:27,0:26:17.51:0,18,231	0/1:19,4:22:23.11:23,0,46	0/1:30,0:31:15.96:16,0,290	./.	./.	0/0:47,0:44:2.98:0,3,36	0/0:8,0:8:6.02:0,6,87	./.	0/1:29,1:30:67.10:67,0,347	./.	0/0:8,0:7:2.97:0,3,20	1/1:16,1:16:5.78:32,6,0	./.
chr10	104561778	.	CAGACAGAGAGAGAGAGAG	C	3050.02	PASS	AB=0.957;AC=12;AF=0.214;AN=56;BaseQRankSum=1.925;DP=653;FS=2.909;HRun=0;HaplotypeScore=297.2815;InbreedingCoeff=0.4796;MQ=58.50;MQ0=11;MQRankSum=-0.794;QD=13.62;ReadPosRankSum=-2.916;VQSLOD=1.9654;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:99:0,112,4014	0/0:5,0:5:15.03:0,15,823	0/0:33,0:17:31.58:0,32,333	0/1:43,0:22:1.35:1,0,311	0/0:21,0:21:41.96:0,42,1175	0/1:13,1:14:9.12:313,0,9	0/1:27,0:27:2.75:362,0,3	1/1:31,0:28:67.80:898,68,0	0/0:21,0:20:51.56:0,52,2074	0/0:25,0:25:65.96:0,66,1827	0/0:8,0:8:15.03:0,15,916	0/0:28,0:28:73.11:0,73,2975	0/0:13,0:13:39.13:0,39,1797	0/0:22,0:22:66.10:0,66,1710	0/0:35,0:35:93.26:0,93,4422	0/0:20,0:20:56.81:0,57,2093	0/0:41,0:41:99:0,123,4577	0/0:21,0:21:63.07:0,63,2293	1/1:13,0:13:16.79:297,17,0	0/1:16,5:21:27.06:120,0,27	0/1:27,0:26:6.16:72,0,6	0/0:15,0:15:42.06:0,42,1250	0/0:12,0:10:27.04:0,27,1102	0/0:44,0:44:99:0,100,4668	1/1:21,0:21:16.35:590,16,0	0/0:13,0:13:39.02:0,39,708	0/1:27,0:27:13.80:561,0,14	0/0:9,0:9:26.99:0,27,927
chr10	104561782	.	CAG	C	323.93	PASS	AB=0.932;AC=15;AF=0.288;AN=52;BaseQRankSum=5.931;DP=654;FS=8.473;HRun=0;HaplotypeScore=123.6909;InbreedingCoeff=-0.1161;MQ=58.38;MQ0=12;MQRankSum=-1.344;QD=1.00;ReadPosRankSum=-1.782;VQSLOD=1.6964;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,4:43:99:109,0,589	0/0:6,0:6:4.55:0,5,152	./.	./.	0/0:19,0:19:15.05:0,15,228	0/0:14,0:14:14.07:0,14,129	1/1:25,0:24:0.25:3,0,0	1/1:27,2:26:12.09:155,12,0	0/0:18,1:18:29.89:0,30,454	0/1:27,2:29:27.09:27,0,358	0/0:7,1:8:12.04:0,12,183	0/1:23,5:28:28.20:28,0,578	0/1:15,0:15:21.20:21,0,253	0/1:22,0:22:9.24:9,0,277	0/1:30,4:34:7.14:7,0,701	0/1:17,4:21:65.11:65,0,298	0/0:41,2:43:4.77:0,5,847	0/1:22,3:25:0.58:1,0,381	0/0:13,0:13:14.32:0,14,102	0/0:17,0:17:12.88:0,13,113	0/0:26,0:25:0.35:0,0,28	0/0:16,2:18:21.07:0,21,296	0/1:12,1:11:16.12:16,0,174	0/0:43,3:46:33.45:0,33,1001	0/1:21,0:21:20.49:20,0,26	0/1:12,0:17:0.27:0,0,84	0/0:27,0:27:8.24:0,8,223	0/0:8,0:8:15.04:0,15,203
chr10	104561824	.	CAG	C	578.59	PASS	AB=0.818;AC=15;AF=0.268;AN=56;BaseQRankSum=9.600;DP=568;FS=0.644;HRun=0;HaplotypeScore=112.7638;InbreedingCoeff=0.8082;MQ=49.85;MQ0=16;MQRankSum=-9.414;QD=4.16;ReadPosRankSum=-4.498;VQSLOD=0.4889;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:46:99:0,100,1800	0/0:11,0:11:28.34:0,28,468	0/0:4,0:1:3.01:0,3,53	0/0:19,1:9:24.06:0,24,331	0/0:15,0:15:27.09:0,27,469	1/1:1,8:11:6.02:69,6,0	1/1:5,16:25:17.37:159,17,0	1/1:16,4:13:29.19:193,29,0	0/0:23,0:22:50.53:0,51,809	0/0:22,0:22:60.20:0,60,1005	0/0:13,0:13:27.08:0,27,425	0/0:24,0:24:50.30:0,50,765	0/0:20,0:20:56.29:0,56,825	0/0:14,0:14:35.67:0,36,553	0/0:24,0:24:60.21:0,60,1051	0/0:22,0:22:54.15:0,54,854	0/0:41,0:41:99:0,102,1626	0/0:16,0:16:32.99:0,33,519	1/1:7,1:16:2.53:106,3,0	0/1:4,2:9:0:0,0,0	1/1:22,5:29:3.79:15,4,0	0/0:18,0:18:35.94:0,36,559	0/0:17,0:15:42.12:0,42,689	0/0:46,0:44:99:0,105,1776	1/1:1,8:12:3.48:36,3,0	0/0:18,0:17:47.62:0,48,730	1/1:4,6:15:7.35:167,7,0	0/0:12,0:12:36.12:0,36,631
chr10	104561832	.	CAG	C	52.20	PASS	AB=0.917;AC=15;AF=0.268;AN=56;BaseQRankSum=9.337;DP=583;FS=4.409;HRun=0;HaplotypeScore=115.0301;InbreedingCoeff=0.7129;MQ=55.89;MQ0=18;MQRankSum=-7.840;QD=0.39;ReadPosRankSum=-3.795;VQSLOD=1.2002;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:47:99:0,109,1835	0/0:12,0:12:34.34:0,34,538	0/0:16,1:8:10.55:0,11,111	0/0:33,2:17:36.35:0,36,594	0/0:14,0:14:30.10:0,30,512	1/1:7,5:12:1.42:9,1,0	1/1:15,16:30:12.71:49,13,0	0/1:20,2:16:14.93:41,0,15	0/0:18,0:17:41.55:0,42,729	0/0:25,0:25:69.15:0,69,1097	0/0:15,0:15:33.11:0,33,561	0/0:22,0:22:48.06:0,48,752	0/0:19,0:19:53.73:0,54,856	0/0:15,0:15:33.04:0,33,539	0/0:24,0:24:63.20:0,63,1082	0/0:21,0:21:57.16:0,57,940	0/0:34,0:34:99:0,99,1650	0/0:17,0:17:42.10:0,42,667	1/1:7,1:8:2.39:16,2,0	1/1:5,2:7:2.94:18,3,0	1/1:27,2:29:3.79:15,4,0	0/0:19,0:19:39.11:0,39,650	0/0:16,0:14:42.14:0,42,740	0/0:43,0:41:99:0,102,1735	1/1:4,8:11:2.74:12,3,0	0/0:20,0:19:50.65:0,51,797	1/1:8,5:13:12.25:51,12,0	0/0:12,0:12:36.12:0,36,619
chr10	104561834	.	G	GAGAC	411.42	PASS	AB=0.857;AC=15;AF=0.268;AN=56;BaseQRankSum=9.341;DP=580;FS=1.434;HRun=0;HaplotypeScore=124.9973;InbreedingCoeff=0.8501;MQ=56.41;MQ0=18;MQRankSum=-7.579;QD=3.46;ReadPosRankSum=-3.785;VQSLOD=0.4628;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:48:99:0,107,1990	0/0:13,0:13:37.33:0,37,610	0/0:19,0:9:11.80:0,12,120	0/0:42,0:22:39.36:0,39,649	0/0:14,0:14:30.10:0,30,547	1/1:11,0:11:9.65:55,10,0	1/1:27,0:26:6.47:74,6,0	1/1:24,0:17:14.03:205,14,0	0/0:18,0:17:41.89:0,42,783	0/0:26,0:26:71.44:0,71,1201	0/0:17,0:17:33.11:0,33,591	0/0:22,0:22:47.89:0,48,803	0/0:19,0:19:53.84:0,54,929	0/0:15,0:15:36.04:0,36,596	0/0:25,0:25:63.20:0,63,1162	0/0:21,0:21:57.16:0,57,1006	0/0:34,0:34:99:0,99,1779	0/0:18,0:18:42.10:0,42,723	1/1:4,0:4:6.03:24,6,0	1/1:5,0:5:4.53:26,5,0	0/1:25,5:30:0.33:2,0,0	0/0:18,0:18:39.13:0,39,718	0/0:16,0:14:42.14:0,42,787	0/0:41,0:39:99:0,102,1868	1/1:10,0:9:2.80:13,3,0	0/0:19,0:18:51.15:0,51,875	1/1:8,0:8:19.08:184,19,0	0/0:12,0:12:36.12:0,36,675
chr10	104561840	.	CAGAG	C	482.78	PASS	AB=0.873;AC=14;AF=0.250;AN=56;BaseQRankSum=9.203;DP=597;FS=3.536;HRun=0;HaplotypeScore=122.4672;InbreedingCoeff=0.6731;MQ=60.03;MQ0=18;MQRankSum=-6.462;QD=4.06;ReadPosRankSum=-2.840;VQSLOD=1.9402;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:47:99:0,109,2592	0/0:13,0:13:35.90:0,36,751	0/0:28,0:14:30.53:0,31,508	0/0:53,0:27:57.54:0,58,1180	0/0:13,0:13:27.09:0,27,696	1/1:8,5:13:2.12:113,2,0	1/1:11,16:26:12.17:108,12,0	0/1:19,2:16:49.33:130,0,49	0/0:17,0:16:41.78:0,42,984	0/0:27,0:27:63.18:0,63,1462	0/0:16,0:16:36.12:0,36,831	0/0:18,0:18:42.07:0,42,868	0/0:20,0:20:59.48:0,59,1326	0/0:13,0:13:36.12:0,36,871	0/0:26,0:26:69.20:0,69,1583	0/0:21,0:21:60.21:0,60,1422	0/0:36,0:36:99:0,99,2205	0/0:20,0:20:51.09:0,51,1002	0/1:4,1:5:3.37:62,0,3	1/1:2,2:4:5.42:26,5,0	1/1:28,2:30:0.74:3,1,0	0/0:18,0:18:42.14:0,42,1035	0/0:16,0:15:42.14:0,42,1086	0/0:41,0:39:99:0,102,2540	1/1:2,8:9:3.01:33,3,0	0/0:20,0:19:53.66:0,54,1102	1/1:6,3:9:8.80:163,9,0	0/0:12,0:12:33.11:0,33,869
chr10	104561844	.	G	GAC	1294.04	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.467;DP=617;FS=1.163;HRun=0;HaplotypeScore=104.4526;InbreedingCoeff=0.9169;MQ=60.31;MQ0=18;MQRankSum=-6.065;QD=10.27;ReadPosRankSum=-3.691;VQSLOD=2.6042;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:44:99:0,103,1669	0/0:13,0:13:36.10:0,36,521	0/0:34,0:19:7.27:0,7,378	0/0:55,0:30:65.41:0,65,879	0/0:13,0:13:30.08:0,30,437	1/1:12,1:13:17.94:235,18,0	1/1:18,9:26:13.88:114,14,0	1/1:9,15:22:56.91:611,57,0	0/0:18,0:17:44.89:0,45,623	0/0:24,0:24:63.18:0,63,940	0/0:16,0:16:36.12:0,36,551	0/0:16,0:16:42.10:0,42,581	0/0:20,0:20:60.09:0,60,869	0/0:15,0:15:42.12:0,42,599	0/0:27,0:27:72.19:0,72,1017	0/0:23,0:23:66.20:0,66,962	0/0:37,0:37:99:0,102,1434	0/0:20,0:20:51.09:0,51,707	1/1:5,1:6:14.91:142,15,0	1/1:4,0:4:6.02:107,6,0	1/1:6,22:28:4.02:12,4,0	0/0:21,0:21:48.14:0,48,692	0/0:16,0:15:42.14:0,42,642	0/0:42,0:40:99:0,108,1582	1/1:11,1:11:5.96:44,6,0	0/0:21,0:20:54.13:0,54,780	1/1:9,0:10:23.86:222,24,0	0/0:12,0:12:33.11:0,33,502
chr10	104564741	.	GGAAGAGGGAA	G	8277.80	PASS	AB=0.972;AC=42;AF=0.750;AN=56;BaseQRankSum=-7.264;DP=583;FS=28.496;HRun=0;HaplotypeScore=240.8304;InbreedingCoeff=-0.1686;MQ=50.46;MQ0=9;MQRankSum=-1.722;QD=14.52;ReadPosRankSum=-1.376;VQSLOD=2.3880;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:46,0:44:55.76:510,56,0	1/1:8,0:8:17.38:141,17,0	0/0:13,0:3:6.01:0,6,74	0/1:14,0:5:23.44:23,0,27	0/1:24,0:24:19.43:325,0,19	1/1:14,0:14:35.26:361,35,0	1/1:23,0:23:47.99:497,48,0	1/1:26,0:23:32.01:250,32,0	1/1:24,0:21:60.95:426,61,0	0/1:34,0:34:99:484,0,161	1/1:16,0:16:7.06:140,7,0	0/1:26,0:25:76.15:405,0,76	0/1:16,0:15:6.37:252,0,6	0/1:10,0:10:8.67:172,0,9	0/1:15,0:15:99:169,0,119	0/1:17,0:18:99:319,0,128	1/1:19,0:19:38.78:321,39,0	1/1:19,0:18:17.69:240,18,0	1/1:27,0:27:53.25:420,53,0	1/1:12,0:11:20.21:146,20,0	1/1:45,0:44:85.42:689,85,0	0/1:14,0:14:61.29:190,0,61	0/1:16,3:19:95.46:210,0,95	0/1:25,0:25:12.33:202,0,12	1/1:13,0:13:37.02:264,37,0	0/1:30,6:35:78.29:669,0,78	1/1:19,0:19:41.10:381,41,0	1/1:8,0:8:11.58:70,12,0
chr10	104564744	.	A	AG	17778.46	PASS	AB=0.933;AC=53;AF=0.946;AN=56;BaseQRankSum=-2.784;DP=581;FS=7.305;HRun=1;HaplotypeScore=144.9857;InbreedingCoeff=0.5455;MQ=51.82;MQ0=6;MQRankSum=-1.416;QD=31.36;ReadPosRankSum=1.695;VQSLOD=4.0818;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,33:44:93.25:1356,93,0	1/1:6,2:8:12.03:151,12,0	0/0:14,0:4:2.55:0,3,38	0/1:13,1:5:0.58:68,0,1	1/1:10,15:25:51.08:715,51,0	1/1:7,10:17:36.12:523,36,0	1/1:6,15:21:48.98:648,49,0	1/1:22,5:25:33.49:332,33,0	1/1:3,20:21:63.11:889,63,0	1/1:11,23:34:87.18:1130,87,0	1/1:5,9:14:29.94:374,30,0	1/1:8,17:24:54.15:773,54,0	1/1:4,13:16:42.14:614,42,0	1/1:0,10:10:27.09:404,27,0	1/1:3,13:16:45.14:652,45,0	1/1:1,17:18:54.18:787,54,0	1/1:6,15:21:51.16:721,51,0	1/1:2,15:17:51.08:704,51,0	1/1:14,13:27:59.90:808,60,0	1/1:5,7:11:21.05:312,21,0	1/1:9,33:42:92.97:1307,93,0	1/1:3,10:13:27.09:404,27,0	1/1:4,14:18:42.14:627,42,0	1/1:9,16:25:45.15:674,45,0	1/1:2,11:13:39.10:558,39,0	1/1:7,28:35:98.86:1379,99,0	1/1:6,13:19:48.98:668,49,0	1/1:3,6:9:15.03:201,15,0
chr10	104564745	.	GAGGGAA	G	25233.73	PASS	AB=0.977;AC=51;AF=0.911;AN=56;BaseQRankSum=-7.010;DP=545;FS=13.367;HRun=0;HaplotypeScore=137.3225;InbreedingCoeff=-0.0945;MQ=53.01;MQ0=5;MQRankSum=-0.102;QD=46.30;ReadPosRankSum=2.018;VQSLOD=4.4384;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:33,13:44:96.06:2040,96,0	1/1:3,5:8:14.63:313,15,0	0/1:14,0:4:35.07:35,0,68	0/1:13,1:5:35.31:137,0,35	1/1:16,8:24:14.09:1029,14,0	1/1:10,6:16:36.12:773,36,0	1/1:17,0:17:48.16:1097,48,0	1/1:5,17:20:46.60:720,47,0	1/1:22,0:21:63.22:1383,63,0	1/1:23,9:32:27.42:1556,27,0	1/1:10,3:13:27.09:557,27,0	1/1:18,7:24:45.67:1053,46,0	1/1:15,0:15:28.91:789,29,0	0/1:11,0:11:4.98:508,0,5	1/1:15,0:15:23.32:808,23,0	0/1:18,0:19:13.76:983,0,14	1/1:19,0:19:51.17:1085,51,0	1/1:17,0:16:45.15:955,45,0	1/1:13,12:25:70.58:1250,71,0	1/1:9,0:8:24.08:506,24,0	1/1:34,6:41:92.29:1913,92,0	1/1:10,2:12:10.95:394,11,0	0/1:17,0:17:10.60:757,0,11	1/1:16,6:22:40.58:869,41,0	1/1:13,0:12:36.12:785,36,0	1/1:34,0:34:19.29:1594,19,0	1/1:15,0:15:45.15:1005,45,0	1/1:8,0:8:15.05:340,15,0
chr10	104564751	.	A	AG	18584.36	PASS	AB=0.854;AC=54;AF=0.964;AN=56;BaseQRankSum=-2.811;DP=576;FS=2.238;HRun=1;HaplotypeScore=129.2452;InbreedingCoeff=-0.0381;MQ=54.20;MQ0=3;MQRankSum=-2.989;QD=32.26;ReadPosRankSum=1.585;VQSLOD=4.6730;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,32:47:96.33:1433,96,0	1/1:5,3:8:15.05:201,15,0	0/1:11,3:7:48.17:119,0,48	0/1:12,2:6:17.67:110,0,18	1/1:8,16:24:57.12:814,57,0	1/1:7,8:15:30.09:425,30,0	1/1:3,23:26:48.15:695,48,0	1/1:17,5:20:49.33:607,49,0	1/1:0,23:23:63.21:937,63,0	1/1:9,23:32:85.66:1160,86,0	1/1:5,9:14:24.08:359,24,0	1/1:9,16:25:54.15:774,54,0	1/1:2,14:16:40.95:582,41,0	1/1:7,8:15:39.06:499,39,0	1/1:0,17:17:45.15:672,45,0	1/1:6,16:22:66.21:959,66,0	1/1:0,21:21:51.17:762,51,0	1/1:2,17:18:47.99:687,48,0	1/1:12,13:25:65.97:856,66,0	1/1:1,8:9:27.09:396,27,0	1/1:8,32:40:93.58:1281,94,0	1/1:3,9:12:24.06:338,24,0	1/1:3,14:17:42.14:628,42,0	1/1:7,15:22:42.14:629,42,0	1/1:2,11:12:36.11:521,36,0	1/1:6,28:34:87.24:1251,87,0	1/1:1,15:16:45.15:669,45,0	1/1:1,9:10:15.05:224,15,0
chr10	104565180	.	ACCAC	A	119.09	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=4.226;DP=385;FS=0.000;HRun=0;HaplotypeScore=63.6910;InbreedingCoeff=0.5710;MQ=44.37;MQ0=27;MQRankSum=-3.842;QD=1.03;ReadPosRankSum=-0.663;VQSLOD=1.1347;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:13.50:0,14,903	0/0:2,0:2:3.48:0,3,85	0/0:30,0:3:8.98:0,9,123	0/0:33,0:8:23.82:0,24,273	0/0:7,0:7:17.42:0,17,377	1/1:8,5:12:2.66:11,3,0	1/1:16,8:23:3.19:40,3,0	1/1:13,0:12:8.39:67,8,0	0/0:12,0:12:31.49:0,31,566	0/0:7,0:7:21.03:0,21,411	0/0:5,0:4:4.26:0,4,13	0/0:16,0:17:2.48:0,2,543	0/0:8,0:7:14.59:0,15,260	0/0:13,0:14:24.49:0,24,470	0/0:12,0:12:26.64:0,27,589	0/0:17,0:17:45.08:0,45,896	0/0:14,0:14:32.32:0,32,583	0/0:9,0:9:26.28:0,26,484	0/1:15,0:11:23.97:30,0,24	1/1:1,0:2:2.99:23,3,0	1/1:36,0:32:7.42:33,7,0	0/0:8,0:8:14.26:0,14,221	./.	0/0:24,0:24:64.71:0,65,1190	1/1:9,2:10:6.74:63,7,0	0/0:16,0:16:40.93:0,41,762	0/0:3,0:4:1.24:0,1,3	0/0:8,0:8:0.74:0,1,132
chr10	104565181	.	C	CA	607.42	PASS	AB=0.900;AC=15;AF=0.278;AN=54;BaseQRankSum=4.570;DP=362;FS=3.017;HRun=1;HaplotypeScore=53.6452;InbreedingCoeff=0.7375;MQ=45.37;MQ0=27;MQRankSum=-4.178;QD=6.20;ReadPosRankSum=-1.157;VQSLOD=0.1421;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:42.76:0,43,553	0/0:2,0:2:3.48:0,3,43	0/0:30,0:3:8.86:0,9,89	0/0:34,0:8:21.06:0,21,249	0/0:7,0:7:18.05:0,18,236	1/1:5,4:8:3.01:43,3,0	1/1:13,5:18:8.24:90,8,0	0/1:8,1:9:0.73:146,0,1	0/0:13,0:13:32.98:0,33,406	0/0:7,0:7:21.04:0,21,252	0/0:5,0:4:4.93:0,5,33	0/0:15,0:15:36.27:0,36,467	0/0:8,0:7:15.05:0,15,204	0/0:13,0:13:18.13:0,18,266	0/0:12,0:12:30.87:0,31,371	0/0:16,0:16:45.10:0,45,552	0/0:12,0:12:33.07:0,33,406	0/0:9,0:9:26.11:0,26,321	1/1:9,5:10:11.53:231,12,0	1/1:2,0:2:3.01:48,3,0	1/1:10,4:31:9.01:97,9,0	0/0:9,0:9:15.49:0,15,185	./.	0/0:27,0:26:56.24:0,56,755	1/1:4,5:9:11.31:82,11,0	0/0:16,0:16:41.09:0,41,480	1/1:1,0:1:3.01:36,3,0	0/0:8,0:8:7.55:0,8,108
chr10	104565685	.	GAA	G	1364.05	PASS	AB=0.973;AC=18;AF=0.321;AN=56;BaseQRankSum=9.415;DP=561;FS=0.000;HRun=16;HaplotypeScore=82.0895;InbreedingCoeff=0.7257;MQ=63.31;MQ0=7;MQRankSum=-1.377;QD=6.50;ReadPosRankSum=7.745;VQSLOD=-0.1153;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:63.01:0,63,569	0/0:8,0:8:14.66:0,15,120	0/1:31,1:11:18.96:19,0,30	0/1:38,0:15:49.16:49,0,55	0/0:14,0:22:45.75:0,46,429	1/1:5,10:17:17.31:165,17,0	1/1:6,9:14:17.60:136,18,0	1/1:12,8:21:28.27:210,28,0	0/0:9,0:11:29.22:0,29,192	0/0:16,0:16:2.86:0,3,227	0/0:14,0:17:40.58:0,41,332	0/0:9,0:9:21.04:0,21,162	0/0:10,0:12:20.37:0,20,174	0/0:19,0:19:46.88:0,47,439	0/0:13,1:22:1.28:0,1,177	0/0:14,0:22:31.73:0,32,272	0/0:23,0:23:59.03:0,59,554	0/0:24,0:25:65.34:0,65,624	1/1:10,10:25:48.52:344,49,0	1/1:3,3:7:1.86:65,2,0	1/1:7,11:18:16.89:149,17,0	0/0:15,0:15:29.98:0,30,274	0/0:21,0:27:53.77:0,54,487	0/0:20,0:21:36.86:0,37,341	1/1:3,4:7:8.97:75,9,0	0/0:16,0:19:38.93:0,39,309	1/1:9,17:26:40.53:349,41,0	0/0:17,0:18:25.74:0,26,211
chr10	104566587	.	AT	A	5773.14	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.147;DP=545;FS=3.536;HRun=3;HaplotypeScore=52.1869;InbreedingCoeff=0.9984;MQ=68.59;MQ0=0;MQRankSum=-1.857;QD=33.18;ReadPosRankSum=0.019;VQSLOD=4.8450;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.32:0,96,1382	0/0:11,0:11:33.10:0,33,457	0/0:25,0:23:66.17:0,66,893	0/0:14,0:13:32.50:0,33,439	0/0:11,0:11:30.10:0,30,432	1/1:1,23:24:66.21:818,66,0	1/1:1,20:21:48.15:595,48,0	1/1:1,28:29:84.25:1029,84,0	0/0:14,0:14:42.14:0,42,604	0/0:21,0:21:63.21:0,63,893	0/0:22,0:22:66.22:0,66,949	0/0:15,0:15:39.12:0,39,543	0/0:16,0:16:48.16:0,48,687	0/0:15,0:15:45.15:0,45,647	0/0:29,0:29:84.28:0,84,1209	0/0:22,0:22:66.21:0,66,932	0/0:24,0:24:63.21:0,63,907	0/0:7,0:7:21.04:0,21,280	1/1:1,24:25:72.20:877,72,0	1/1:0,13:13:39.12:484,39,0	1/1:0,22:22:63.20:781,63,0	0/0:22,0:22:63.20:0,63,891	0/0:13,0:13:33.11:0,33,475	0/0:27,0:27:78.26:0,78,1123	1/1:0,15:15:42.13:521,42,0	0/0:21,0:21:63.21:0,63,892	1/1:2,23:25:54.17:669,54,0	0/0:8,0:8:21.07:0,21,302
chr10	104566771	.	CCTCT	C	2712.90	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=6.347;DP=456;FS=12.502;HRun=0;HaplotypeScore=69.3059;InbreedingCoeff=0.9342;MQ=56.03;MQ0=15;MQRankSum=-3.030;QD=21.03;ReadPosRankSum=1.615;VQSLOD=2.3783;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:41.93:0,42,935	0/0:8,0:8:17.99:0,18,336	0/0:42,0:12:14.98:0,15,184	0/0:72,0:16:5.74:0,6,217	0/0:12,0:13:23.83:0,24,385	1/1:6,7:13:13.29:208,13,0	1/1:3,12:15:11.17:396,11,0	1/1:9,13:21:42.11:633,42,0	0/0:14,0:13:30.10:0,30,752	0/0:6,0:6:15.05:0,15,378	0/0:7,0:7:17.68:0,18,444	0/0:13,0:13:30.05:0,30,643	0/0:9,0:9:18.04:0,18,400	0/0:8,0:8:21.06:0,21,477	0/0:16,0:17:41.91:0,42,924	0/0:15,0:15:42.13:0,42,962	0/0:14,0:14:30.07:0,30,633	0/0:22,0:22:51.17:0,51,1245	1/1:14,3:16:18.05:271,18,0	1/1:4,3:6:6.49:104,6,0	1/1:6,18:24:18.03:356,18,0	0/0:8,0:8:24.08:0,24,549	0/0:6,0:6:18.06:0,18,394	0/0:18,0:18:39.08:0,39,795	1/1:2,8:10:21.03:329,21,0	0/0:9,0:9:24.08:0,24,603	1/1:2,17:19:35.03:616,35,0	0/0:6,0:6:12.04:0,12,294
chr10	104568209	.	GGT	G	300.29	PASS	AB=0.946;AC=17;AF=0.327;AN=52;BaseQRankSum=5.348;DP=598;FS=7.677;HRun=0;HaplotypeScore=76.6727;InbreedingCoeff=-0.0009;MQ=67.67;MQ0=17;MQRankSum=1.268;QD=1.06;ReadPosRankSum=3.749;VQSLOD=0.0921;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:17.98:0,18,242	0/0:6,0:5:9:0,9,122	./.	./.	0/0:13,0:13:18.03:0,18,208	1/1:19,0:19:9.47:83,9,0	1/1:20,0:19:3.48:33,3,0	0/0:27,0:24:0.89:0,1,2	0/1:18,2:19:11.01:11,0,219	0/0:13,0:13:5.98:0,6,62	0/0:12,0:12:9.03:0,9,127	0/1:16,1:16:7.53:8,0,238	0/0:18,0:18:18.03:0,18,236	0/0:21,0:21:24.28:0,24,286	0/0:28,0:28:21.07:0,21,309	0/1:17,2:19:43.18:43,0,133	0/1:20,1:20:11.11:11,0,179	0/1:13,2:15:22.61:23,0,56	0/0:19,0:18:6.01:0,6,71	0/0:12,0:13:9:0,9,105	0/1:40,0:40:7.99:8,0,198	0/1:10,0:10:9.91:10,0,134	0/1:17,0:16:8.02:8,0,240	0/1:37,2:40:54.96:55,0,316	1/1:13,0:12:14.87:142,15,0	0/0:34,0:34:10.78:0,11,100	0/1:12,1:13:17.05:17,0,123	0/1:17,0:17:0.88:1,0,88
chr10	104569589	.	TAG	T	2319.28	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.890;DP=695;FS=3.991;HRun=0;HaplotypeScore=78.3433;InbreedingCoeff=0.9992;MQ=82.15;MQ0=0;MQRankSum=-1.959;QD=35.68;ReadPosRankSum=2.194;VQSLOD=6.0617;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,172,3149	0/0:8,0:8:24.08:0,24,438	0/0:22,0:22:66.23:0,66,1201	0/0:23,0:23:63.20:0,63,1121	0/0:29,0:29:84.23:0,84,1465	1/1:2,17:19:48.16:707,48,0	1/1:1,18:19:45.15:662,45,0	0/0:32,0:32:96.31:0,96,1682	0/0:17,0:17:51.15:0,51,885	0/0:27,0:27:72.21:0,72,1287	0/0:19,0:19:54.16:0,54,941	0/0:30,0:30:90.31:0,90,1678	0/0:20,0:20:60.21:0,60,1116	0/0:16,0:16:48.16:0,48,890	0/0:26,0:26:75.22:0,75,1305	0/0:22,0:22:63.22:0,63,1166	0/0:36,0:36:99:0,108,1924	0/0:28,0:28:84.26:0,84,1493	0/0:25,0:25:69.22:0,69,1231	0/0:26,0:26:75.24:0,75,1364	0/0:35,0:35:99:0,105,1956	0/0:19,0:19:57.18:0,57,1009	0/0:17,0:17:48.15:0,48,866	0/0:40,0:40:99:0,120,2150	1/1:1,26:27:75.25:1093,75,0	0/0:20,0:20:60.21:0,60,1120	0/0:24,0:24:72.25:0,72,1332	0/0:12,0:12:36:0,36,506
chr10	104574145	.	G	GA	1001.39	PASS	AB=0.884;AC=12;AF=0.214;AN=56;BaseQRankSum=-1.857;DP=533;FS=12.126;HRun=12;HaplotypeScore=66.8610;InbreedingCoeff=0.4315;MQ=57.79;MQ0=32;MQRankSum=-1.757;QD=6.59;ReadPosRankSum=-2.521;VQSLOD=0.4092;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,1:39:25.95:0,26,349	0/1:6,1:7:14.29:14,0,72	0/0:11,0:2:3.45:0,3,22	0/0:18,0:9:19.29:0,19,117	0/1:21,1:20:34.66:35,0,103	0/0:17,0:15:19.12:0,19,189	0/0:28,0:27:9.62:0,10,233	1/1:13,15:24:32.18:276,32,0	0/0:17,0:17:22.88:0,23,155	0/0:19,0:18:47.67:0,48,347	0/0:17,0:17:25.83:0,26,181	0/0:23,0:22:7.75:0,8,181	0/0:18,0:18:23.65:0,24,174	0/0:14,0:13:11.76:0,12,87	0/0:20,0:19:25.80:0,26,183	0/0:20,2:21:3.40:0,3,189	0/0:22,0:19:29.71:0,30,217	0/0:19,2:19:0.58:0,1,165	1/1:15,6:21:15.96:274,16,0	0/1:15,5:15:15.54:166,0,16	1/1:1,19:20:26.99:253,27,0	0/0:8,0:8:14.91:0,15,109	0/0:16,1:17:0.22:0,0,167	0/0:23,0:25:23.27:0,23,254	0/0:12,0:11:11.01:0,11,86	0/1:16,1:19:8.76:9,0,168	1/1:14,0:14:18.58:141,19,0	0/0:11,0:10:12.30:0,12,161
chr10	104574644	.	G	GC	2674.07	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.497;DP=661;FS=2.587;HRun=7;HaplotypeScore=64.5365;InbreedingCoeff=0.9875;MQ=70.12;MQ0=0;MQRankSum=-1.028;QD=25.23;ReadPosRankSum=-1.873;VQSLOD=3.5590;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:96.09:0,96,917	0/0:10,0:10:27.04:0,27,261	0/0:23,0:23:54.55:0,55,521	0/0:11,0:10:26.25:0,26,234	0/0:29,0:29:75.12:0,75,724	0/0:31,0:31:81.11:0,81,778	0/0:24,0:24:63.10:0,63,608	1/1:2,19:21:22.17:540,22,0	0/0:22,0:22:60.07:0,60,573	0/0:26,0:26:75.12:0,75,722	0/0:10,0:10:27.04:0,27,261	0/0:33,0:33:96.15:0,96,927	0/0:28,0:28:75.12:0,75,724	0/0:23,0:23:66.11:0,66,637	0/0:28,0:28:63.08:0,63,602	0/0:33,0:33:90.12:0,90,862	0/0:27,0:27:78.05:0,78,727	0/0:25,0:25:55.06:0,55,494	1/1:4,16:20:51.16:614,51,0	1/1:2,14:16:10.14:406,10,0	1/1:4,23:27:57.13:671,57,0	0/0:29,0:29:84.12:0,84,804	0/0:11,0:11:33.05:0,33,319	0/0:37,0:37:99:0,99,944	0/0:22,0:22:57.06:0,57,543	0/0:24,0:24:66.10:0,66,637	1/1:1,21:22:51.16:616,51,0	0/0:12,0:12:33.05:0,33,318
chr10	104575230	.	C	CAA	1960.02	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.649;DP=650;FS=0.000;HRun=2;HaplotypeScore=92.3279;InbreedingCoeff=0.9818;MQ=66.50;MQ0=3;MQRankSum=-2.335;QD=16.47;ReadPosRankSum=-3.359;VQSLOD=-0.2561;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,126,1467	0/0:14,0:14:35.19:0,35,422	0/0:25,0:15:35.07:0,35,364	0/0:23,0:18:47:0,47,457	0/0:23,0:23:54.01:0,54,602	0/0:15,0:15:42.03:0,42,458	0/0:36,0:36:77.07:0,77,985	1/1:20,0:20:47.95:460,48,0	0/0:24,0:24:46.33:0,46,700	0/0:21,0:21:53.08:0,53,512	0/0:14,0:14:30.06:0,30,375	0/0:27,0:27:48.77:0,49,790	0/0:9,0:9:8.45:0,8,187	0/0:21,0:21:37.89:0,38,630	0/0:17,0:16:51.01:0,51,529	0/0:14,0:14:17.66:0,18,330	0/0:38,0:38:99:0,102,1204	0/0:32,0:32:86.48:0,86,988	1/1:21,0:21:59.40:568,59,0	1/1:2,13:15:32.62:291,33,0	1/1:9,28:38:24.78:411,25,0	0/0:20,0:19:44.91:0,45,437	0/0:13,0:13:26.98:0,27,257	0/0:36,0:36:92.59:0,93,1088	0/0:20,0:20:57.06:0,57,658	0/0:24,0:23:63.10:0,63,766	1/1:7,16:23:31.54:404,32,0	0/0:12,0:12:32.77:0,33,339
chr10	104577668	.	TAC	T	3194.16	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.695;DP=659;FS=1.974;HRun=0;HaplotypeScore=99.5831;InbreedingCoeff=0.9974;MQ=90.70;MQ0=0;MQRankSum=-0.761;QD=29.04;ReadPosRankSum=1.141;VQSLOD=4.8006;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,160,2780	0/0:9,0:9:27.09:0,27,481	0/0:22,0:22:58.96:0,59,913	0/0:35,0:35:74.01:0,74,1194	0/0:16,0:16:45.15:0,45,799	0/0:16,0:16:48.16:0,48,852	0/0:29,0:29:87.28:0,87,1527	1/1:3,19:22:57.18:779,57,0	0/0:31,0:31:87.30:0,87,1523	0/0:26,0:26:69.24:0,69,1215	0/0:11,0:11:30.09:0,30,511	0/0:29,0:29:84.29:0,84,1506	0/0:24,0:24:66.22:0,66,1169	0/0:23,0:23:69.24:0,69,1229	0/0:22,0:22:60.21:0,60,1080	0/0:19,0:18:54.18:0,54,955	0/0:27,0:27:81.28:0,81,1429	0/0:29,0:29:84.29:0,84,1490	1/1:3,11:14:33.11:460,33,0	1/1:2,9:11:27.09:378,27,0	1/1:4,41:45:39.29:1206,39,0	0/0:15,0:15:39.13:0,39,697	0/0:16,0:16:45.15:0,45,793	0/0:36,0:36:99:0,105,1834	0/0:28,0:28:81.28:0,81,1446	0/0:22,0:22:66.23:0,66,1166	1/1:1,17:18:39.13:546,39,0	0/0:6,0:6:18.06:0,18,324
chr10	104580158	.	CA	C	6644.81	PASS	AB=0.708;AC=54;AF=0.964;AN=56;BaseQRankSum=7.149;DP=490;FS=2.924;HRun=2;HaplotypeScore=338.0444;InbreedingCoeff=-0.0385;MQ=54.90;MQ0=0;MQRankSum=-0.447;QD=13.56;ReadPosRankSum=4.615;VQSLOD=4.1312;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:39:71.30:526,71,0	1/1:9,0:9:16.67:115,17,0	0/1:3,5:8:14.42:166,0,14	0/1:6,2:8:52.56:53,0,53	1/1:18,0:18:40.85:249,41,0	1/1:19,0:19:53.04:341,53,0	1/1:21,0:21:31.85:259,32,0	1/1:36,0:36:58.73:375,59,0	1/1:19,0:19:30.90:220,31,0	1/1:28,0:28:64.26:347,64,0	1/1:7,0:7:14.54:83,15,0	1/1:23,1:24:42.99:340,43,0	1/1:13,0:13:35.36:226,35,0	1/1:14,0:14:26.62:186,27,0	1/1:26,0:26:66.08:433,66,0	1/1:19,0:19:38.75:265,39,0	1/1:17,0:17:34.32:215,34,0	1/1:15,0:15:24.02:158,24,0	1/1:13,0:13:25.59:130,26,0	1/1:16,0:16:47.02:304,47,0	1/1:14,0:14:23.75:174,24,0	1/1:18,0:18:34.86:210,35,0	1/1:15,0:15:37.95:223,38,0	1/1:12,0:12:23.69:170,24,0	1/1:11,0:11:29.54:194,30,0	1/1:29,0:29:66.72:376,67,0	1/1:15,0:15:36:216,36,0	1/1:7,0:7:14.68:89,15,0
chr10	104580179	.	C	CA	2332.67	PASS	AB=0.963;AC=49;AF=0.907;AN=54;BaseQRankSum=-2.695;DP=466;FS=109.221;HRun=1;HaplotypeScore=399.5832;InbreedingCoeff=0.2213;MQ=36.87;MQ0=0;MQRankSum=0.990;QD=5.05;ReadPosRankSum=-3.591;VQSLOD=0.2790;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:37,1:38:26.38:147,26,0	1/1:8,0:8:6.10:20,6,0	./.	0/0:2,0:2:3.01:0,3,35	0/1:18,0:18:2.58:65,0,3	1/1:16,1:17:14.04:66,14,0	1/1:20,0:20:21.68:130,22,0	1/1:29,2:31:39.87:164,40,0	1/1:17,1:18:23.85:136,24,0	1/1:27,2:29:30.09:188,30,0	0/1:7,1:8:7.96:57,0,8	1/1:25,0:25:24.38:192,24,0	1/1:14,0:14:7.92:49,8,0	1/1:16,1:17:12.54:102,13,0	1/1:26,0:26:17.09:74,17,0	1/1:19,0:19:17.30:101,17,0	1/1:17,1:18:17.77:126,18,0	1/1:10,0:10:13.48:66,13,0	1/1:16,0:16:20.57:91,21,0	0/1:12,0:12:2.87:3,0,9	1/1:12,0:12:8:46,8,0	1/1:21,1:22:14.22:216,14,0	1/1:15,0:15:8.31:119,8,0	1/1:12,0:12:0.05:30,0,0	1/1:11,0:11:11.98:70,12,0	1/1:24,1:25:29.17:118,29,0	1/1:16,0:16:2.78:44,3,0	1/1:5,0:5:6.55:19,7,0
chr10	104582658	.	TGTGGGG	T	1407.67	PASS	AC=16;AF=0.348;AN=46;BaseQRankSum=2.949;DP=180;FS=7.535;HRun=0;HaplotypeScore=41.6034;InbreedingCoeff=0.6221;MQ=77.49;MQ0=0;MQRankSum=-4.985;QD=18.05;ReadPosRankSum=-0.100;VQSLOD=1.3491;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:6.01:0,6,123	./.	./.	0/0:13,0:10:15.59:0,16,258	0/0:4,0:4:3.01:0,3,99	1/1:2,2:4:6.02:117,6,0	1/1:9,8:17:24.03:440,24,0	1/1:12,3:15:9.03:178,9,0	0/0:7,0:7:9.03:0,9,295	./.	0/0:3,0:3:6.02:0,6,166	0/0:9,0:9:9.92:0,10,282	0/0:2,0:2:6.02:0,6,185	0/0:3,0:3:6.02:0,6,196	./.	0/0:1,0:1:3.01:0,3,99	0/0:10,0:10:7.22:0,7,49	0/0:8,0:8:7.27:0,7,200	1/1:3,2:5:5.99:85,6,0	1/1:5,7:12:15.05:312,15,0	1/1:6,5:11:1.43:59,1,0	0/0:3,0:3:6.02:0,6,194	0/0:5,0:5:6.02:0,6,178	0/0:12,0:12:6.49:0,6,198	1/1:5,2:7:9.03:188,9,0	0/0:1,0:1:3.01:0,3,99	1/1:6,1:7:9.03:187,9,0	./.
chr10	104582776	.	ATC	A	279.68	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.136;DP=404;FS=5.850;HRun=0;HaplotypeScore=49.4541;InbreedingCoeff=0.7654;MQ=81.39;MQ0=4;MQRankSum=-2.229;QD=6.50;ReadPosRankSum=-0.060;VQSLOD=2.0584;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:30.03:0,30,420	0/0:7,0:7:14.77:0,15,106	0/0:34,0:21:44.14:0,44,485	0/0:40,0:25:57.35:0,57,589	0/0:12,0:12:32.60:0,33,302	1/1:14,0:14:38.95:322,39,0	1/1:14,0:14:2.53:36,3,0	0/0:14,0:14:35.99:0,36,328	0/0:11,0:11:29.99:0,30,304	0/0:9,0:9:24.01:0,24,244	0/0:6,0:6:17.99:0,18,177	0/0:10,0:10:30.03:0,30,338	0/0:7,0:7:21.01:0,21,234	0/0:10,0:10:22.65:0,23,328	0/0:12,0:12:28.63:0,29,357	0/0:10,0:10:27:0,27,271	0/0:27,0:27:51.76:0,52,819	0/0:20,0:20:41.48:0,41,594	0/0:11,0:11:22.28:0,22,210	0/0:8,0:8:23.90:0,24,188	0/0:36,0:37:42.41:0,42,383	0/0:5,0:5:15.01:0,15,182	0/0:5,0:5:12.01:0,12,157	0/0:29,0:29:75.82:0,76,908	1/1:2,13:15:3.01:42,3,0	0/0:7,0:7:18.02:0,18,193	0/0:10,0:10:17.99:0,18,160	0/0:1,0:1:3:0,3,25
chr10	104582779	.	TCTCA	T	227.31	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.724;DP=410;FS=4.958;HRun=0;HaplotypeScore=64.1558;InbreedingCoeff=0.6628;MQ=77.97;MQ0=4;MQRankSum=1.011;QD=17.49;ReadPosRankSum=-0.892;VQSLOD=2.2795;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:33.02:0,33,619	0/0:7,0:7:14.77:0,15,106	0/0:31,0:18:44.14:0,44,485	0/0:39,0:24:57.35:0,57,589	0/0:11,0:11:32.63:0,33,420	1/1:13,0:13:38.95:322,39,0	0/0:3,13:16:6.74:0,7,50	0/0:13,0:13:39.04:0,39,397	0/0:11,0:11:33:0,33,407	0/0:9,0:9:27.02:0,27,316	0/0:6,0:6:17.99:0,18,206	0/0:11,0:11:33.04:0,33,460	0/0:7,0:7:21.02:0,21,321	0/0:11,0:11:33.02:0,33,523	0/0:12,0:12:36.02:0,36,532	0/0:10,0:10:30.08:0,30,501	0/0:28,0:28:79.82:0,80,1204	0/0:21,0:21:57.03:0,57,906	0/0:8,0:8:22.28:0,22,236	0/0:8,0:8:23.90:0,24,188	0/0:38,0:38:44.16:0,44,450	0/0:5,0:5:15.01:0,15,240	0/0:5,0:5:12.04:0,12,274	0/0:34,0:34:73.14:0,73,1402	0/0:15,1:16:4.73:0,5,47	0/0:9,0:9:24.07:0,24,361	0/0:10,0:10:18.02:0,18,196	0/0:1,0:1:3:0,3,25
chr10	104582781	.	T	TCACACA	30.10	PASS	AB=1.000;AC=8;AF=0.182;AN=44;BaseQRankSum=1.700;DP=421;FS=0.000;HRun=0;HaplotypeScore=89.3768;InbreedingCoeff=0.2904;MQ=71.66;MQ0=5;MQRankSum=-3.744;QD=0.39;ReadPosRankSum=-1.717;VQSLOD=1.4683;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:18.02:0,18,265	./.	./.	./.	0/0:12,0:12:6.02:0,6,120	./.	0/0:17,0:17:6:0,6,58	1/1:12,0:12:2.98:21,3,0	0/0:12,0:12:9.01:0,9,119	0/0:10,0:10:5.34:0,5,98	0/0:6,0:6:3.01:0,3,60	0/0:12,0:11:14.23:0,14,194	0/0:7,0:7:6.02:0,6,96	0/0:9,0:10:18.05:0,18,307	0/1:12,0:13:35.69:36,0,168	0/0:10,0:10:10.57:0,11,133	0/1:28,0:30:0.76:1,0,602	0/0:19,0:21:24.08:0,24,426	1/1:12,0:12:3.48:71,3,0	./.	0/0:28,11:45:0.67:0,1,2	0/0:6,0:6:6.01:0,6,75	0/0:5,0:5:6.01:0,6,85	0/0:33,0:34:42.01:0,42,704	0/0:16,0:16:5.80:0,6,70	0/0:9,0:9:6.01:0,6,57	1/1:10,0:10:0.16:1,0,0	./.
chr10	104586026	.	C	CCA	694.42	PASS	AB=0.905;AC=6;AF=0.107;AN=56;BaseQRankSum=1.659;DP=614;FS=8.305;HRun=0;HaplotypeScore=91.3976;InbreedingCoeff=0.3686;MQ=61.53;MQ0=22;MQRankSum=0.480;QD=4.86;ReadPosRankSum=-0.423;VQSLOD=1.7586;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:77.65:0,78,866	0/0:8,0:8:21.06:0,21,247	0/1:40,0:19:8.58:9,0,222	0/0:36,0:23:12.60:0,13,234	0/0:19,0:18:22.60:0,23,246	0/1:23,0:22:42.63:311,0,43	0/1:9,12:23:0.15:44,0,0	0/0:24,0:25:29.93:0,30,331	0/0:21,0:20:37.65:0,38,436	0/0:18,0:17:29.80:0,30,363	0/0:7,0:7:17.92:0,18,194	0/0:31,0:31:56.82:0,57,643	0/0:21,0:20:38.73:0,39,412	0/0:12,0:12:20.37:0,20,193	0/0:30,0:30:63.14:0,63,718	0/0:25,0:25:54.02:0,54,643	0/0:21,0:21:45.08:0,45,499	0/0:18,0:18:20.16:0,20,391	0/0:22,0:20:24.04:0,24,267	0/0:13,0:13:27.05:0,27,299	0/1:35,0:33:99:111,0,372	0/0:19,0:22:42.13:0,42,502	0/0:13,0:12:24.07:0,24,290	0/0:31,0:31:52.13:0,52,695	1/1:20,1:21:25.63:348,26,0	0/0:21,0:20:42.11:0,42,480	0/0:14,0:14:23.16:0,23,255	0/0:4,0:3:5.50:0,6,42
chr10	104586043	.	T	TAC	544.78	PASS	AB=0.962;AC=15;AF=0.288;AN=52;BaseQRankSum=1.723;DP=686;FS=5.104;HRun=0;HaplotypeScore=102.5146;InbreedingCoeff=0.3698;MQ=50.75;MQ0=34;MQRankSum=-1.978;QD=2.40;ReadPosRankSum=0.350;VQSLOD=1.6187;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:28.53:0,29,179	0/1:15,0:14:4.65:19,0,5	./.	./.	0/1:16,5:19:29.86:30,0,69	0/1:23,0:22:15.75:16,0,23	0/1:31,0:31:43.42:43,0,64	1/1:24,0:24:2.04:6,2,0	0/0:26,0:25:21.08:0,21,169	0/0:19,0:18:14.92:0,15,89	0/0:13,0:12:9.48:0,9,89	0/0:29,0:27:14.99:0,15,144	0/0:24,0:23:6.78:0,7,130	0/1:20,0:19:26.60:27,0,80	0/0:33,0:33:18.96:0,19,182	0/0:27,0:26:11.62:0,12,84	0/0:25,0:24:8.66:0,9,85	0/0:19,0:18:18.85:0,19,163	1/1:16,0:14:6.45:48,6,0	1/1:17,0:16:5.95:43,6,0	1/1:43,0:40:23.02:350,23,0	0/0:28,0:26:18.30:0,18,149	0/0:15,0:14:16.86:0,17,145	0/0:42,0:42:20.99:0,21,154	0/0:25,0:24:1.56:0,2,13	0/0:26,0:25:15.26:0,15,128	1/1:16,1:16:13.80:123,14,0	0/0:5,0:4:1.74:0,2,29
chr10	104589113	.	AACACAC	A	674.91	PASS	AC=12;AF=0.240;AN=50;BaseQRankSum=4.375;DP=617;FS=4.651;HRun=0;HaplotypeScore=136.7851;InbreedingCoeff=0.7717;MQ=59.32;MQ0=15;MQRankSum=-4.982;QD=4.89;ReadPosRankSum=-0.447;VQSLOD=2.2398;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:48:27.03:0,27,533	0/0:4,0:6:3.30:0,3,58	./.	./.	0/0:16,0:18:11.70:0,12,282	1/1:10,11:22:11.21:149,11,0	1/1:23,6:29:11.88:243,12,0	0/0:19,0:19:0.47:0,0,1	0/0:23,0:24:21.96:0,22,469	0/0:23,0:22:5.41:0,5,808	0/0:17,0:17:24.08:0,24,589	0/0:18,0:19:12.04:0,12,250	0/0:17,0:18:24.03:0,24,543	0/0:12,0:10:12.04:0,12,321	0/0:30,0:29:42.12:0,42,1071	0/0:15,0:17:20.88:0,21,472	0/0:36,0:39:48.16:0,48,1200	0/0:24,0:24:42.10:0,42,1156	./.	1/1:8,0:9:2.98:42,3,0	1/1:30,8:38:7.20:58,7,0	0/0:18,0:18:27.97:0,28,603	0/0:15,0:16:18.04:0,18,350	0/0:26,0:26:39.13:0,39,1027	1/1:16,5:23:5.33:213,5,0	0/0:17,0:17:35.15:0,35,731	1/1:11,4:15:5.97:123,6,0	0/0:11,0:11:27.53:0,28,704
chr10	104589501	.	GT	G	1682.39	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.855;DP=733;FS=11.598;HRun=10;HaplotypeScore=101.5354;InbreedingCoeff=0.9625;MQ=66.01;MQ0=9;MQRankSum=-3.356;QD=16.18;ReadPosRankSum=0.277;VQSLOD=2.8002;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,2:53:92.28:0,92,1444	0/0:10,0:10:24.06:0,24,265	0/0:66,1:29:33.67:0,34,293	0/0:55,1:22:4.07:0,4,192	0/0:30,1:31:52.12:0,52,773	0/0:21,0:21:59.15:0,59,386	0/0:21,0:21:41.54:0,42,251	1/1:11,20:31:62.65:531,63,0	0/0:21,0:21:54.10:0,54,565	0/0:28,0:29:49.15:0,49,623	0/0:21,0:21:55.32:0,55,565	0/0:25,0:25:59.10:0,59,596	0/0:17,1:18:22.03:0,22,442	0/0:9,0:9:27.07:0,27,299	0/0:25,0:27:66.87:0,67,697	0/0:16,1:17:19.11:0,19,438	0/0:38,0:38:99:0,99,1087	0/0:27,0:27:72.15:0,72,782	1/1:11,13:23:35.96:312,36,0	1/1:1,15:16:44.99:390,45,0	1/1:3,14:17:32.99:286,33,0	0/0:21,0:21:48.07:0,48,506	0/0:19,0:21:56.99:0,57,611	0/0:33,0:34:86.98:0,87,908	0/0:22,0:22:59.04:0,59,384	0/0:30,0:30:69.17:0,69,751	1/1:1,15:16:38.99:338,39,0	0/0:10,0:10:21:0,21,209
chr10	104591279	.	C	CAGTA	5675.02	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.045;DP=624;FS=4.540;HRun=0;HaplotypeScore=112.7621;InbreedingCoeff=0.9978;MQ=74.23;MQ0=0;MQRankSum=-10.092;QD=53.54;ReadPosRankSum=-3.528;VQSLOD=5.0501;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,1918	0/0:9,0:9:27.09:0,27,512	0/0:23,0:23:69.22:0,69,1212	0/0:12,0:12:18.53:0,19,322	0/0:33,0:33:90.27:0,90,1593	0/0:23,0:23:54.17:0,54,979	0/0:18,0:18:51.17:0,51,949	1/1:4,16:22:66.21:1512,66,0	0/0:25,0:25:75.26:0,75,1415	0/0:31,0:31:87.30:0,87,1633	0/0:17,0:17:51.17:0,51,949	0/0:15,0:15:39.13:0,39,740	0/0:28,0:28:69.24:0,69,1310	0/0:19,0:19:54.17:0,54,992	0/0:20,0:20:54.19:0,54,1025	0/0:14,0:14:30.09:0,30,526	0/0:29,0:29:84.24:0,84,1517	0/0:24,0:24:69.24:0,69,1290	1/1:4,13:17:48.14:1213,48,0	1/1:2,16:19:51.01:1088,51,0	1/1:2,27:32:58.09:871,58,0	0/0:30,0:30:84.25:0,84,1466	0/0:13,0:13:36.09:0,36,619	0/0:39,0:39:99:0,105,1982	0/0:19,0:19:54.19:0,54,1006	0/0:29,0:29:78.27:0,78,1481	1/1:1,15:16:39.10:991,39,0	0/0:11,0:11:30.10:0,30,558
chr10	104591650	.	TTG	T	1076.52	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=10.733;DP=814;FS=4.810;HRun=0;HaplotypeScore=138.2238;InbreedingCoeff=0.5174;MQ=59.04;MQ0=15;MQRankSum=-1.884;QD=5.76;ReadPosRankSum=2.586;VQSLOD=2.8076;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:68.81:0,69,1073	0/0:15,0:15:15.07:0,15,585	0/0:27,0:11:11.49:0,11,146	0/0:41,0:16:30.08:0,30,434	0/0:41,0:41:99:0,111,1797	1/1:2,15:17:15.05:191,15,0	1/1:4,14:18:21.04:267,21,0	0/1:42,0:40:9.02:9,0,274	0/0:33,0:33:93.31:0,93,1512	0/0:40,0:39:90.19:0,90,1433	0/0:26,0:26:69.22:0,69,1096	0/0:23,1:24:28.03:0,28,1000	0/0:24,0:24:63.20:0,63,1017	0/0:23,0:23:69.24:0,69,1142	0/0:37,0:37:99:0,99,1584	0/0:35,1:36:64.15:0,64,1595	0/0:35,0:34:31.89:0,32,1028	0/0:16,0:16:25:0,25,584	0/1:31,0:26:51.23:51,0,111	0/1:17,0:17:6.89:7,0,15	0/0:40,0:39:9.51:0,10,48	0/0:31,0:31:87.28:0,87,1390	0/0:24,0:24:66.22:0,66,1066	0/0:35,0:35:42.80:0,43,1120	1/1:4,29:33:52.05:651,52,0	0/0:34,1:35:58.13:0,58,1480	0/1:23,0:23:30.59:58,0,31	0/0:11,0:11:24.08:0,24,401
chr10	104591654	.	GTGTGTGTGTA	G	5003.94	PASS	AB=0.909;AC=10;AF=0.179;AN=56;BaseQRankSum=6.491;DP=819;FS=1.007;HRun=0;HaplotypeScore=238.6376;InbreedingCoeff=0.7176;MQ=57.33;MQ0=19;MQRankSum=-9.025;QD=26.48;ReadPosRankSum=-2.117;VQSLOD=3.9810;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:68.45:0,68,2680	0/0:15,0:15:42.14:0,42,1607	0/1:29,0:9:8.22:8,0,249	0/0:43,0:15:24.07:0,24,625	0/0:39,0:39:99:0,111,4763	0/0:17,0:17:15.05:0,15,458	0/0:18,0:18:5.09:0,5,612	0/1:35,10:39:57.26:1785,0,57	0/0:33,0:33:93.31:0,93,4025	0/0:38,0:37:90.25:0,90,3706	0/0:24,0:24:69.24:0,69,2934	0/0:26,0:26:75.24:0,75,3174	0/0:25,0:25:66.21:0,66,2624	0/0:23,0:23:69.24:0,69,3300	0/0:40,0:40:99:0,111,4420	0/0:37,0:37:99:0,105,4528	0/0:32,0:31:69.21:0,69,2949	0/0:17,0:17:45.15:0,45,1717	1/1:12,18:26:58.06:1473,58,0	1/1:9,11:18:9.02:212,9,0	1/1:37,5:41:11.77:295,12,0	0/0:32,0:32:90.31:0,90,3655	0/0:23,0:23:66.21:0,66,2635	0/0:34,0:35:71.60:0,72,3123	0/0:33,0:33:54.15:0,54,1539	0/0:34,0:34:96.32:0,96,3645	1/1:6,17:23:45.13:1232,45,0	0/0:14,0:14:33.11:0,33,1263
chr10	104591658	.	G	GTA	297.18	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=9.084;DP=835;FS=0.000;HRun=0;HaplotypeScore=149.2920;InbreedingCoeff=0.4579;MQ=54.99;MQ0=23;MQRankSum=-6.797;QD=2.19;ReadPosRankSum=-1.255;VQSLOD=2.3065;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:60.41:0,60,1031	0/0:15,0:15:45.11:0,45,617	0/0:31,0:7:16.67:0,17,181	0/0:47,0:14:32.98:0,33,441	0/0:39,0:39:99:0,114,1706	0/0:18,0:18:23.76:0,24,166	0/0:19,0:19:26.67:0,27,177	0/1:41,0:34:99:300,0,193	0/0:33,0:33:96.31:0,96,1439	0/0:35,0:34:99:0,102,1432	0/0:25,0:25:72.21:0,72,1056	0/0:27,0:27:78.15:0,78,1076	0/0:28,0:28:72.19:0,72,1029	0/0:23,0:23:69.23:0,69,1052	0/0:38,0:38:99:0,111,1564	0/0:38,0:37:99:0,105,1553	0/0:30,0:29:75.04:0,75,1039	0/0:16,0:16:44.98:0,45,608	0/1:31,0:25:60.73:61,0,165	1/1:21,0:19:4.99:31,5,0	1/1:33,10:41:3.71:22,4,0	0/0:32,0:32:90.28:0,90,1330	0/0:25,0:25:69.21:0,69,1029	0/0:36,0:36:91.63:0,92,1189	0/0:31,0:31:56.26:0,56,385	0/0:37,0:37:99:0,105,1516	0/0:27,0:27:5.97:0,6,104	0/0:16,0:16:39.04:0,39,485
chr10	104591662	.	G	GTGTA	2056.06	PASS	AB=0.980;AC=7;AF=0.125;AN=56;BaseQRankSum=6.035;DP=841;FS=1.083;HRun=0;HaplotypeScore=171.9927;InbreedingCoeff=0.1983;MQ=53.28;MQ0=23;MQRankSum=-7.657;QD=10.33;ReadPosRankSum=-1.482;VQSLOD=2.6717;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:81.12:0,81,1382	0/0:15,0:16:44.92:0,45,754	0/1:33,0:6:8.33:8,0,172	0/0:49,0:13:24.07:0,24,443	0/0:39,0:39:99:0,117,2113	0/0:18,0:18:21.04:0,21,227	0/0:20,0:20:32.91:0,33,341	0/1:43,0:33:68.39:1137,0,68	0/0:36,0:36:99:0,102,1858	0/0:33,0:32:96.22:0,96,1742	0/0:24,0:24:72.21:0,72,1334	0/0:29,0:29:81.18:0,81,1368	0/0:26,0:26:75.18:0,75,1287	0/0:24,0:24:69.24:0,69,1351	0/0:37,0:37:99:0,111,1944	0/0:40,0:39:99:0,114,2076	0/0:30,0:29:69.09:0,69,1261	0/0:15,0:15:42.12:0,42,770	0/1:30,0:24:40.75:539,0,41	1/1:19,0:17:9:124,9,0	0/1:41,5:44:7.92:133,0,8	0/0:31,0:31:90.28:0,90,1684	0/0:24,0:24:72.19:0,72,1300	0/0:36,0:36:83.21:0,83,1419	0/0:30,0:30:54.13:0,54,625	0/0:37,0:37:99:0,111,1966	0/1:28,0:28:95.85:244,0,96	0/0:13,0:13:39.04:0,39,595
chr10	104591688	.	CTG	C	1464.37	PASS	AB=0.776;AC=9;AF=0.161;AN=56;BaseQRankSum=11.593;DP=868;FS=4.091;HRun=0;HaplotypeScore=147.7857;InbreedingCoeff=0.8477;MQ=51.34;MQ0=32;MQRankSum=-6.330;QD=8.56;ReadPosRankSum=-1.408;VQSLOD=3.3457;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:78.25:0,78,1282	0/0:16,0:16:36.58:0,37,582	0/0:41,0:5:8.98:0,9,140	0/0:58,0:9:19.75:0,20,228	0/0:35,0:35:87.30:0,87,1455	0/0:16,0:16:33.11:0,33,557	0/0:20,0:20:46.36:0,46,747	0/1:27,11:26:99:191,0,126	0/0:38,0:37:99:0,99,1629	0/0:32,0:29:84.28:0,84,1396	0/0:21,0:21:51.16:0,51,841	0/0:37,0:37:99:0,105,1737	0/0:23,0:23:60.18:0,60,991	0/0:27,0:27:75.09:0,75,1165	0/0:37,0:37:99:0,102,1727	0/0:38,0:37:99:0,99,1639	0/0:28,0:28:66.19:0,66,1053	0/0:20,0:20:47.95:0,48,710	1/1:16,10:21:47.76:464,48,0	1/1:9,12:19:14.55:188,15,0	1/1:40,15:54:27.44:345,27,0	0/0:32,0:32:87.26:0,87,1366	0/0:25,0:24:66.19:0,66,1040	0/0:35,0:35:89.40:0,89,1440	0/0:25,0:25:63.20:0,63,1024	0/0:36,0:36:93.30:0,93,1504	1/1:7,24:31:52.57:439,53,0	0/0:21,0:21:56.79:0,57,945
chr10	104591706	.	A	ATG	3423.96	PASS	AB=0.648;AC=9;AF=0.161;AN=56;BaseQRankSum=3.003;DP=890;FS=10.334;HRun=0;HaplotypeScore=147.5358;InbreedingCoeff=0.8611;MQ=51.49;MQ0=29;MQRankSum=-3.756;QD=17.47;ReadPosRankSum=-4.061;VQSLOD=2.4750;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:84.25:0,84,1064	0/0:15,0:15:36.10:0,36,453	0/0:42,0:6:14.97:0,15,183	0/0:59,0:15:27.06:0,27,336	0/0:31,0:31:75.20:0,75,931	0/0:18,0:18:29.98:0,30,376	0/0:21,0:21:39.58:0,40,492	0/1:16,19:26:79.16:597,0,79	0/0:37,0:36:90.29:0,90,1169	0/0:34,0:32:84.74:0,85,1078	0/0:22,0:22:54.16:0,54,686	0/0:34,0:34:87.28:0,87,1130	0/0:23,0:23:57.17:0,57,724	0/0:22,0:22:59.39:0,59,723	0/0:40,0:40:99:0,111,1395	0/0:39,0:38:99:0,105,1272	0/0:28,0:28:63.07:0,63,800	0/0:17,0:17:29.61:0,30,459	1/1:15,10:22:52.34:698,52,0	1/1:21,10:29:39.58:614,40,0	1/1:50,17:66:56.73:954,57,0	0/0:32,0:32:78.22:0,78,998	0/0:23,0:22:54.15:0,54,674	0/0:39,0:39:98.79:0,99,1250	0/0:23,0:23:57.15:0,57,700	0/0:34,0:34:96.30:0,96,1222	1/1:9,29:38:17.92:561,18,0	0/0:21,0:21:42.66:0,43,722
chr10	104591804	.	ATGTGTGTGTATG	A	1046.39	PASS	AB=0.622;AC=5;AF=0.093;AN=54;BaseQRankSum=5.253;DP=932;FS=9.068;HRun=0;HaplotypeScore=303.6845;InbreedingCoeff=0.8907;MQ=53.06;MQ0=25;MQRankSum=-5.453;QD=14.53;ReadPosRankSum=-2.189;VQSLOD=0.4566;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:90.23:0,90,4412	0/0:15,0:15:39.13:0,39,1926	./.	0/0:43,0:14:15.03:0,15,221	0/0:20,0:20:45.14:0,45,1957	1/1:4,24:28:20.53:737,21,0	0/1:9,14:23:0.44:0,0,1	0/0:45,0:33:33.11:0,33,703	0/0:37,0:37:99:0,99,4188	0/0:45,0:43:87.29:0,87,3559	0/0:16,0:16:42.14:0,42,1760	0/0:28,0:28:60.21:0,60,3147	0/0:28,0:28:72.23:0,72,3231	0/0:26,0:26:53.70:0,54,2480	0/0:43,0:43:99:0,99,5267	0/0:41,0:41:99:0,108,4928	0/0:30,0:30:66.41:0,66,3071	0/0:26,0:25:60.03:0,60,2345	0/0:24,0:14:27.09:0,27,848	0/0:33,0:33:63.22:0,63,2569	0/0:98,0:96:99:0,160,6350	0/0:24,0:24:51.16:0,51,2271	0/0:27,0:27:57.20:0,57,2660	0/0:46,0:45:99:0,105,4797	1/1:4,17:21:11.19:422,11,0	0/0:37,0:33:63.22:0,63,2879	0/0:20,0:20:48.16:0,48,2198	0/0:20,0:20:51.15:0,51,1808
chr10	104591924	.	A	AT	3035.65	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.734;DP=675;FS=1.297;HRun=9;HaplotypeScore=74.4815;InbreedingCoeff=0.9935;MQ=66.46;MQ0=0;MQRankSum=0.645;QD=23.17;ReadPosRankSum=-3.332;VQSLOD=3.0929;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:52:99:0,118,1032	0/0:10,0:11:29.03:0,29,240	0/0:14,0:14:18.39:0,18,168	0/0:12,0:12:23.97:0,24,204	0/0:24,0:24:26.87:0,27,458	0/0:34,0:34:89.97:0,90,780	0/0:18,1:19:17.84:0,18,384	1/1:11,22:33:57.13:619,57,0	0/0:23,0:23:65.95:0,66,567	0/0:33,1:34:59.80:0,60,748	0/0:22,0:22:62.99:0,63,547	0/0:28,0:28:74.97:0,75,651	0/0:22,0:22:53.95:0,54,464	0/0:18,0:18:50.99:0,51,443	0/0:31,0:31:80.98:0,81,703	0/0:22,0:23:62.98:0,63,547	0/0:18,0:18:50.99:0,51,442	0/0:17,0:19:52.02:0,52,421	1/1:5,20:25:60.16:664,60,0	1/1:3,24:27:43.68:661,44,0	1/1:2,23:25:43.13:704,43,0	0/0:25,0:26:74:0,74,627	0/0:24,0:24:62.96:0,63,543	0/0:21,0:21:56.94:0,57,488	0/0:26,0:26:68.98:0,69,599	0/0:36,0:36:89.92:0,90,779	1/1:1,20:21:51.14:564,51,0	0/0:7,0:7:18:0,18,156
chr10	104592847	.	TTG	T	298.98	PASS	AB=0.945;AC=20;AF=0.400;AN=50;BaseQRankSum=4.639;DP=511;FS=1.578;HRun=0;HaplotypeScore=77.0340;InbreedingCoeff=0.0148;MQ=63.56;MQ0=12;MQRankSum=-0.800;QD=1.10;ReadPosRankSum=2.886;VQSLOD=1.5370;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:17.59:0,18,261	0/0:5,0:5:6.02:0,6,71	./.	0/0:30,0:13:0:0,0,0	0/0:14,0:15:3.01:0,3,38	1/1:14,0:14:3.04:31,3,0	0/1:29,0:29:32.64:33,0,76	./.	0/0:7,0:7:9:0,9,94	0/1:29,1:30:27.11:27,0,139	0/0:13,0:13:19.56:0,20,241	0/0:11,0:11:8.10:0,8,173	0/1:11,2:13:23.37:23,0,80	0/1:13,2:15:20.37:20,0,121	0/1:11,0:12:9.91:10,0,177	0/1:7,1:7:23.39:23,0,60	0/0:23,0:22:27.02:0,27,340	0/1:20,1:22:10.74:11,0,314	./.	1/1:14,1:16:5.78:32,6,0	1/1:23,0:23:3.45:21,3,0	0/0:8,0:7:3.01:0,3,31	1/1:12,1:13:3.01:32,3,0	0/0:23,2:25:9.63:0,10,430	0/1:22,0:22:19.12:19,0,53	0/1:25,0:24:4.42:4,0,232	1/1:11,0:21:29.59:159,30,0	0/1:9,0:9:0.74:1,0,171
chr10	104592892	.	TGCGC	T	1529.73	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=5.794;DP=405;FS=6.874;HRun=0;HaplotypeScore=86.6902;InbreedingCoeff=0.8501;MQ=58.57;MQ0=10;MQRankSum=-3.527;QD=10.06;ReadPosRankSum=0.604;VQSLOD=2.1523;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:51:0,51,808	0/0:6,0:6:18.02:0,18,263	0/0:1,0:1:3:0,3,28	0/1:5,0:4:1.14:7,0,1	0/0:10,0:10:18.01:0,18,255	1/1:2,15:17:5.77:66,6,0	1/1:24,0:24:34.47:696,34,0	1/1:16,0:15:23.31:205,23,0	0/0:7,0:7:11.99:0,12,188	0/0:21,0:19:27.62:0,28,415	0/0:13,0:12:32.95:0,33,532	0/0:14,0:13:23.68:0,24,405	0/0:8,0:8:17.62:0,18,271	0/0:9,0:9:18.02:0,18,351	0/0:12,0:12:21.05:0,21,567	0/0:9,0:9:21.07:0,21,373	0/0:20,0:20:28.27:0,28,919	0/0:22,0:21:61.98:0,62,1061	1/1:12,0:10:8.88:86,9,0	1/1:15,0:16:15.02:146,15,0	1/1:24,0:23:3.56:32,4,0	0/0:6,0:6:12.04:0,12,197	0/0:11,0:10:17.87:0,18,263	0/0:27,0:27:60.12:0,60,1053	1/1:6,15:20:12.51:200,13,0	0/0:19,0:19:36.28:0,36,490	1/1:17,0:17:30.04:284,30,0	0/0:15,0:15:38.97:0,39,587
chr10	104592895	.	GCGCGCGCGCC	G	2558.47	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=8.085;DP=411;FS=6.716;HRun=0;HaplotypeScore=124.2911;InbreedingCoeff=0.6948;MQ=60.52;MQ0=7;MQRankSum=-5.752;QD=23.26;ReadPosRankSum=-0.192;VQSLOD=2.5749;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:54.19:0,54,2215	0/0:8,0:8:24.08:0,24,980	0/0:1,0:1:3.01:0,3,53	0/1:6,0:5:14.96:15,0,49	0/0:12,0:12:27.09:0,27,1135	0/0:17,0:17:6.02:0,6,89	0/0:24,0:24:32.99:0,33,707	1/1:8,13:20:38.73:831,39,0	0/0:6,0:6:15.05:0,15,598	0/0:19,0:18:30.09:0,30,1078	0/0:15,0:14:36.59:0,37,1383	0/0:14,0:13:26.93:0,27,1119	0/0:8,0:8:17.79:0,18,744	0/0:10,0:10:21.07:0,21,952	0/0:15,0:15:41.93:0,42,1728	0/0:10,0:10:27.09:0,27,1209	0/1:20,0:20:15.07:15,0,2438	0/0:22,0:21:66.23:0,66,2783	1/1:5,6:10:17.62:336,18,0	1/1:2,13:15:15.05:468,15,0	1/1:8,13:20:5.34:156,5,0	0/0:6,0:6:12.04:0,12,543	0/0:12,0:11:18.45:0,18,806	0/0:28,0:28:63.69:0,64,2787	0/0:20,0:19:12:0,12,169	0/0:16,0:16:42.61:0,43,1497	1/1:4,12:16:30.10:911,30,0	0/0:15,0:15:39.13:0,39,1572
chr10	104594122	.	AT	A	2181.24	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=14.281;DP=550;FS=0.000;HRun=10;HaplotypeScore=59.2488;InbreedingCoeff=0.9302;MQ=64.25;MQ0=0;MQRankSum=-2.993;QD=12.68;ReadPosRankSum=-2.079;VQSLOD=2.7678;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1105	0/0:13,0:13:36.10:0,36,398	0/1:10,0:8:1.38:1,0,76	0/0:6,0:5:5.68:0,6,44	0/0:22,1:23:26.70:0,27,565	1/1:1,0:24:42.77:126,43,0	1/1:2,0:16:26.48:78,26,0	1/1:6,26:32:74.96:651,75,0	0/0:13,0:13:36.10:0,36,398	0/0:21,0:21:51.14:0,51,564	0/0:19,1:20:28.09:0,28,538	0/0:16,0:16:42.10:0,42,454	0/0:18,1:19:31.08:0,31,421	0/0:16,1:17:22.07:0,22,472	0/0:10,0:10:27.07:0,27,292	0/0:21,0:21:57.12:0,57,618	0/0:19,1:20:31.10:0,31,571	0/0:26,1:27:40.12:0,40,671	1/1:2,14:16:41.95:355,42,0	1/1:1,16:17:47.99:417,48,0	1/1:4,14:18:29.98:260,30,0	0/0:20,1:21:31.10:0,31,571	0/0:24,0:24:60.16:0,60,664	0/0:15,0:15:39.11:0,39,431	1/1:2,0:20:34.63:102,35,0	0/0:29,2:32:28.94:0,29,759	1/1:2,16:19:47.02:397,47,0	0/0:22,2:24:20.05:0,20,659
chr10	104594257	.	C	CATGTCAGAT	10654.13	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.049;DP=611;FS=1.422;HRun=0;HaplotypeScore=179.5493;InbreedingCoeff=0.9986;MQ=78.12;MQ0=0;MQRankSum=-13.318;QD=92.64;ReadPosRankSum=-2.886;VQSLOD=4.5532;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.29:0,90,2647	0/0:9,0:9:27.09:0,27,838	0/0:24,0:24:67.90:0,68,1725	0/0:14,0:14:30.10:0,30,757	0/0:28,0:28:81.28:0,81,2482	0/0:29,0:29:84.29:0,84,2527	0/0:24,0:24:66.21:0,66,1885	1/1:27,8:36:84.29:3413,84,0	0/0:20,0:20:57.18:0,57,1657	0/0:18,0:18:54.19:0,54,1657	0/0:22,0:22:66.21:0,66,1885	0/0:26,0:26:78.27:0,78,2347	0/0:23,0:23:69.20:0,69,1921	0/0:22,0:22:66.23:0,66,1916	0/0:14,0:14:39.13:0,39,1210	0/0:22,0:22:63.20:0,63,1876	0/0:25,0:25:75.23:0,75,2256	0/0:25,0:25:72.23:0,72,2078	1/1:7,4:13:33.10:1268,33,0	1/1:11,12:25:42.14:2010,42,0	1/1:10,2:12:21.07:936,21,0	0/0:27,0:27:75.26:0,75,2192	0/0:21,0:21:57.20:0,57,1758	0/0:14,0:14:42.14:0,42,1303	0/0:17,0:17:51.18:0,51,1554	0/0:26,0:26:72.24:0,72,2166	1/1:17,10:29:66.23:3027,66,0	0/0:14,0:14:42.14:0,42,1303
chr10	104594488	.	TA	T	803.15	PASS	AB=0.946;AC=12;AF=0.214;AN=56;BaseQRankSum=12.198;DP=491;FS=22.282;HRun=10;HaplotypeScore=63.7781;InbreedingCoeff=0.5156;MQ=77.52;MQ0=1;MQRankSum=1.767;QD=5.95;ReadPosRankSum=-0.484;VQSLOD=0.1234;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,2:28:26.06:0,26,721	0/0:15,0:15:39.10:0,39,424	0/0:20,1:18:2.61:0,3,236	0/1:8,1:9:2.50:3,0,66	0/0:24,2:26:24.48:0,24,593	0/1:15,0:15:4.07:4,0,21	0/0:12,0:12:6.30:0,6,30	1/1:27,0:27:49.44:250,49,0	0/1:13,2:15:13.01:13,0,317	0/0:22,0:22:54.13:0,54,585	0/0:18,1:20:30.93:0,31,552	0/0:17,0:17:45.12:0,45,498	0/0:10,0:10:30.06:0,30,322	0/0:13,1:14:10.02:0,10,322	0/0:10,0:10:30.07:0,30,323	0/0:21,1:22:40.04:0,40,640	0/0:12,0:12:30.07:0,30,325	0/0:18,0:18:48.13:0,48,531	1/1:18,0:18:7.14:148,7,0	1/1:20,0:20:40.65:209,41,0	0/1:10,0:10:45.56:53,0,46	0/0:12,0:12:33.09:0,33,365	0/0:19,2:21:20.32:0,20,441	0/0:11,1:12:1.01:0,1,230	0/0:19,0:19:9.60:0,10,36	0/0:25,1:26:46.14:0,46,730	1/1:21,0:21:49.51:285,50,0	0/0:19,0:19:53.85:0,54,557
chr10	104594497	.	AAC	A	2267.82	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=12.955;DP=492;FS=19.864;HRun=0;HaplotypeScore=71.4719;InbreedingCoeff=0.8230;MQ=79.89;MQ0=1;MQRankSum=-0.633;QD=15.43;ReadPosRankSum=-0.247;VQSLOD=1.8286;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78:0,78,1162	0/0:15,0:15:42.10:0,42,661	0/0:22,0:19:15.17:0,15,439	0/1:11,0:11:21.88:22,0,170	0/0:28,0:28:77.90:0,78,1131	1/1:4,12:16:44.71:542,45,0	1/1:1,10:11:24.08:329,24,0	1/1:23,0:23:52.04:224,52,0	0/0:15,0:15:44.90:0,45,642	0/0:28,0:28:75.21:0,75,1105	0/0:20,0:20:60.07:0,60,896	0/0:15,0:15:45.15:0,45,768	0/0:10,0:10:30.10:0,30,510	0/0:14,0:14:38.99:0,39,600	0/0:15,0:15:45.09:0,45,661	0/0:23,0:23:69.11:0,69,1111	0/0:11,0:11:30.07:0,30,482	0/0:18,0:18:54.13:0,54,864	1/1:18,0:18:32.26:236,32,0	1/1:18,1:19:46.98:232,47,0	0/1:10,0:10:22.46:29,0,22	0/0:12,0:12:36.09:0,36,545	0/0:19,0:19:51.04:0,51,779	0/0:10,0:10:26.96:0,27,397	1/1:1,17:18:51.17:699,51,0	0/0:24,0:24:72.14:0,72,1192	1/1:21,0:21:43.41:158,43,0	0/0:18,0:18:48.16:0,48,811
chr10	104594498	.	AC	A	3813.57	PASS	AB=0.917;AC=17;AF=0.304;AN=56;BaseQRankSum=12.150;DP=487;FS=20.840;HRun=1;HaplotypeScore=56.1660;InbreedingCoeff=0.9019;MQ=80.07;MQ0=1;MQRankSum=-0.632;QD=26.12;ReadPosRankSum=0.152;VQSLOD=2.1033;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.79:0,73,946	0/0:14,0:14:42.12:0,42,552	0/0:22,0:19:33.01:0,33,390	0/1:10,1:11:11.15:11,0,132	0/0:28,0:28:71.61:0,72,851	1/1:15,1:16:43.97:303,44,0	1/1:10,0:10:23.29:132,23,0	1/1:1,22:23:66.08:832,66,0	0/0:15,0:15:37.33:0,37,492	0/0:26,0:26:73.25:0,73,857	0/0:20,0:20:53.84:0,54,721	0/0:15,0:15:45.15:0,45,610	0/0:10,0:10:30.10:0,30,401	0/0:14,0:14:34.26:0,34,465	0/0:15,0:15:45.06:0,45,525	0/0:23,0:23:65.02:0,65,863	0/0:12,0:12:33.03:0,33,409	0/0:18,0:18:54.12:0,54,695	1/1:1,17:18:49.57:647,50,0	1/1:5,14:19:57.13:712,57,0	1/1:2,8:10:5.90:195,6,0	0/0:12,0:12:36.10:0,36,470	0/0:19,0:19:26.43:0,26,593	0/0:10,0:10:20.78:0,21,302	1/1:18,0:18:49.45:280,49,0	0/0:24,0:24:70.11:0,70,940	1/1:0,21:21:51.17:701,51,0	0/0:16,0:16:48.16:0,48,647
chr10	104594574	.	A	AT	1271.04	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-4.985;DP=496;FS=2.699;HRun=8;HaplotypeScore=48.7149;InbreedingCoeff=0.8448;MQ=73.94;MQ0=0;MQRankSum=0.144;QD=22.30;ReadPosRankSum=-0.295;VQSLOD=3.7126;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39:0,39,352	0/0:11,0:11:26.99:0,27,242	0/0:14,0:12:12.78:0,13,178	0/1:6,0:5:7:7,0,44	0/0:26,0:26:75.01:0,75,680	1/1:3,21:24:69.19:785,69,0	1/1:2,10:12:15.04:173,15,0	0/0:22,0:22:60.03:0,60,549	0/0:12,0:12:30:0,30,270	0/0:37,0:37:99:0,102,929	0/0:18,0:18:48.02:0,48,439	0/0:14,0:14:42:0,42,378	0/0:13,0:13:33.01:0,33,302	0/0:14,0:14:38.99:0,39,348	0/0:21,0:21:62.99:0,63,568	0/0:25,0:25:69.02:0,69,628	0/0:21,0:21:54.02:0,54,494	0/0:18,0:18:48.02:0,48,439	0/0:19,0:19:57.02:0,57,518	0/0:15,0:15:39.01:0,39,357	0/0:18,0:18:47.99:0,48,433	0/0:18,1:19:19.40:0,19,428	0/0:17,0:17:41.99:0,42,380	0/0:10,0:10:30.01:0,30,274	1/1:3,12:15:39.12:450,39,0	0/0:23,0:23:57.02:0,57,518	0/0:23,1:24:22.47:0,22,454	0/0:14,0:14:39.02:0,39,357
chr10	104595272	.	GC	G	5916.08	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=16.903;DP=745;FS=5.204;HRun=1;HaplotypeScore=88.8737;InbreedingCoeff=0.9995;MQ=85.94;MQ0=0;MQRankSum=0.198;QD=38.92;ReadPosRankSum=-0.708;VQSLOD=4.9128;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,2149	0/0:8,0:8:24.08:0,24,380	0/0:26,0:26:78.19:0,78,1177	0/0:31,0:31:90.27:0,90,1393	0/0:20,0:20:60.20:0,60,954	0/0:18,0:18:54.18:0,54,861	0/0:41,0:41:99:0,123,1913	1/1:0,25:25:75.21:996,75,0	0/0:28,0:28:84.27:0,84,1316	0/0:21,0:21:63.21:0,63,986	0/0:18,0:18:45.14:0,45,684	0/0:27,0:27:78.25:0,78,1219	0/0:23,0:23:69.17:0,69,1039	0/0:22,0:22:63.21:0,63,1005	0/0:30,0:30:90.26:0,90,1409	0/0:25,0:25:75.13:0,75,1128	0/0:47,0:47:99:0,141,2195	0/0:19,0:19:54.10:0,54,830	1/1:0,20:20:60.17:815,60,0	1/1:0,25:25:69.23:960,69,0	1/1:0,55:55:99:2097,151,0	0/0:15,0:15:45.14:0,45,695	0/0:19,0:19:54.17:0,54,837	0/0:29,0:29:84.20:0,84,1280	0/0:19,0:19:57.02:0,57,871	0/0:34,0:34:99:0,102,1582	1/1:0,27:27:74.99:1048,75,0	0/0:27,0:27:81.28:0,81,1287
chr10	104595534	.	G	GA	7149.68	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.623;DP=652;FS=3.139;HRun=1;HaplotypeScore=79.6587;InbreedingCoeff=0.9996;MQ=84.74;MQ0=0;MQRankSum=-1.406;QD=33.25;ReadPosRankSum=0.842;VQSLOD=4.6419;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1534	0/0:13,0:13:36.09:0,36,447	0/0:23,0:23:66.17:0,66,805	0/0:22,0:22:54.12:0,54,642	0/0:20,0:20:60.20:0,60,778	1/1:19,0:19:53.88:435,54,0	1/1:29,0:29:77.73:615,78,0	1/1:2,27:29:81.24:1164,81,0	0/0:34,0:34:99:0,102,1280	0/0:19,0:19:54.18:0,54,701	0/0:12,0:12:33.09:0,33,412	0/0:21,0:21:63.20:0,63,817	0/0:12,0:12:36.10:0,36,451	0/0:25,0:25:72.22:0,72,920	0/0:22,0:22:66.20:0,66,841	0/0:17,0:17:48.16:0,48,623	0/0:42,0:42:99:0,123,1564	0/0:23,0:23:60.12:0,60,729	1/1:2,18:20:60.18:862,60,0	1/1:2,20:22:57.16:830,57,0	1/1:2,38:39:96.33:1439,96,0	0/0:24,0:24:66.18:0,66,821	0/0:15,0:15:45.13:0,45,566	0/0:21,0:21:60.15:0,60,760	1/1:24,0:24:62.81:502,63,0	0/0:22,0:22:60.18:0,60,764	1/1:0,32:32:87.29:1303,87,0	0/0:8,0:8:24.08:0,24,312
chr10	104595535	.	A	AG	5368.31	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.089;DP=643;FS=3.691;HRun=2;HaplotypeScore=83.0352;InbreedingCoeff=0.9995;MQ=84.03;MQ0=0;MQRankSum=-5.459;QD=25.56;ReadPosRankSum=1.870;VQSLOD=4.7668;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1687	0/0:13,0:13:36.12:0,36,496	0/0:23,0:23:69.17:0,69,886	0/0:19,0:20:54.14:0,54,703	0/0:20,0:20:60.20:0,60,838	1/1:0,19:19:54.18:863,54,0	1/1:2,28:30:78.27:1246,78,0	1/1:28,0:28:69.76:440,70,0	0/0:35,0:35:99:0,102,1390	0/0:18,0:18:54.18:0,54,755	0/0:11,0:11:33.11:0,33,452	0/0:21,0:21:63.21:0,63,880	0/0:12,0:12:36.12:0,36,502	0/0:26,0:26:75.22:0,75,1013	0/0:23,0:23:66.22:0,66,921	0/0:16,0:16:48.16:0,48,671	0/0:42,0:42:99:0,126,1734	0/0:23,0:23:63.18:0,63,838	1/1:19,0:19:51.03:328,51,0	1/1:20,0:20:35.20:319,35,0	1/1:39,0:38:72.76:596,73,0	0/0:24,0:24:66.22:0,66,915	0/0:15,0:15:45.15:0,45,622	0/0:21,0:21:60.20:0,60,836	1/1:0,23:23:63.21:1006,63,0	0/0:20,0:20:60.19:0,60,820	1/1:32,0:32:85.85:570,86,0	0/0:8,0:8:24.08:0,24,336
chr10	104597079	.	A	AT	718.26	PASS	AB=0.830;AC=12;AF=0.214;AN=56;BaseQRankSum=-5.895;DP=481;FS=10.652;HRun=14;HaplotypeScore=64.1118;InbreedingCoeff=0.0239;MQ=69.67;MQ0=2;MQRankSum=-0.636;QD=3.86;ReadPosRankSum=-2.515;VQSLOD=-0.5027;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,2:44:8.26:0,8,387	0/0:6,0:6:11.81:0,12,77	0/0:18,1:14:11.78:0,12,68	0/0:8,0:8:9.27:0,9,40	0/0:8,0:10:16.70:0,17,102	0/0:0,0:11:20.37:0,20,59	0/0:3,0:30:50.43:0,50,145	0/1:10,15:25:5.57:195,0,6	0/1:11,0:11:2.39:2,0,95	0/1:9,1:11:9.55:10,0,65	0/0:7,0:8:13.79:0,14,83	0/0:12,0:13:25.54:0,26,159	0/0:19,0:19:17.05:0,17,106	0/0:12,1:13:11.58:0,12,75	0/0:18,0:20:22.34:0,22,140	0/0:10,0:11:19.59:0,20,121	0/0:27,2:29:0.38:0,0,255	0/1:28,0:29:5.21:5,0,192	0/1:10,7:18:42.60:128,0,43	1/1:6,9:17:13.41:214,13,0	0/1:7,21:29:5.42:226,0,5	0/0:7,0:7:14.76:0,15,96	0/1:6,2:8:15.23:15,0,45	0/0:27,0:32:73.07:0,73,444	0/0:4,0:13:13.68:0,14,39	0/1:14,0:15:3.39:3,0,93	0/1:8,7:15:23.53:57,0,24	0/1:6,0:8:1.15:1,0,86
chr10	104597245	.	T	TG	1613.23	PASS	AB=0.979;AC=13;AF=0.232;AN=56;BaseQRankSum=5.396;DP=448;FS=28.854;HRun=0;HaplotypeScore=57.5573;InbreedingCoeff=0.6163;MQ=68.50;MQ0=3;MQRankSum=1.197;QD=10.90;ReadPosRankSum=2.439;VQSLOD=2.0304;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.71:0,73,759	0/0:1,0:1:3:0,3,27	0/0:35,0:10:6.97:0,7,90	0/0:29,0:10:13.01:0,13,85	0/0:12,0:12:33.07:0,33,390	1/1:1,18:19:42.12:492,42,0	1/1:1,13:14:33.03:393,33,0	1/1:25,1:26:7.60:136,8,0	0/0:5,0:5:15.04:0,15,191	0/0:18,0:18:46.59:0,47,511	0/0:10,0:10:25.74:0,26,271	0/0:9,0:9:24.03:0,24,245	0/0:9,0:9:26.95:0,27,279	0/0:9,0:9:23.99:0,24,236	0/0:9,0:9:27.02:0,27,259	0/0:16,0:16:43.64:0,44,491	0/0:22,0:22:60.07:0,60,645	0/0:36,0:34:96.33:0,96,1025	1/1:19,0:19:2.78:82,3,0	0/1:19,0:18:34.53:38,0,35	0/1:17,0:17:18.97:61,0,19	0/0:2,0:2:6.01:0,6,55	0/0:7,0:7:15.65:0,16,171	0/0:7,0:7:18.35:0,18,168	1/1:2,17:19:39.94:467,40,0	0/0:24,0:24:72.15:0,72,809	0/1:14,1:15:2.78:116,0,3	0/0:13,0:13:37.87:0,38,410
chr10	104598639	.	TA	T	1045.56	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.860;DP=504;FS=0.651;HRun=4;HaplotypeScore=59.6370;InbreedingCoeff=0.9914;MQ=87.75;MQ0=0;MQRankSum=-2.470;QD=29.87;ReadPosRankSum=2.525;VQSLOD=3.7477;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.25:0,81,1116	0/0:7,0:7:15.05:0,15,209	0/0:22,0:22:50.60:0,51,747	0/0:18,0:18:39.41:0,39,509	0/0:25,0:25:66.21:0,66,907	1/1:0,11:11:30.09:360,30,0	1/1:0,16:16:45.14:540,45,0	0/0:30,0:30:81.26:0,81,1120	0/0:22,0:22:66.21:0,66,909	0/0:15,0:15:45.15:0,45,630	0/0:17,0:17:42.14:0,42,588	0/0:19,0:19:51.17:0,51,713	0/0:12,0:12:36.12:0,36,501	0/0:9,0:9:27.09:0,27,378	0/0:20,0:20:57.19:0,57,798	0/0:18,0:18:48.16:0,48,672	0/0:22,0:22:66.21:0,66,907	0/0:19,0:19:54.18:0,54,752	0/0:16,0:16:48.16:0,48,668	0/0:22,0:22:57.19:0,57,795	0/0:25,0:25:72.24:0,72,1008	0/0:7,0:7:21.06:0,21,277	0/0:18,0:18:48.14:0,48,639	0/0:15,0:15:38.68:0,39,545	1/1:0,8:8:24.07:288,24,0	0/0:22,0:22:57.19:0,57,798	0/0:28,0:28:84.28:0,84,1166	0/0:11,0:11:30.10:0,30,420
chr10	104598885	.	GA	G	5623.77	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=12.783;DP=528;FS=5.688;HRun=3;HaplotypeScore=56.4247;InbreedingCoeff=0.9278;MQ=69.55;MQ0=1;MQRankSum=0.004;QD=32.32;ReadPosRankSum=-3.174;VQSLOD=3.5456;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1403	0/0:13,0:13:39.13:0,39,562	0/0:11,0:10:20.98:0,21,276	0/1:8,0:8:7.20:7,0,217	0/0:26,0:26:75.25:0,75,1080	1/1:0,20:20:57.18:706,57,0	1/1:0,21:21:57.18:706,57,0	1/1:0,33:33:99:1191,99,0	0/0:11,0:11:33.10:0,33,456	0/0:23,0:23:69.23:0,69,994	0/0:18,0:18:51.10:0,51,709	0/0:20,0:20:57.19:0,57,821	0/0:15,0:15:42.14:0,42,605	0/0:13,0:13:39.13:0,39,562	0/0:20,0:20:60.20:0,60,864	0/0:20,0:20:60.20:0,60,864	0/0:21,0:21:63.20:0,63,889	0/0:17,0:17:42.14:0,42,605	1/1:0,12:12:36.11:446,36,0	1/1:2,20:22:54.17:670,54,0	1/1:0,11:11:30.09:372,30,0	0/0:14,0:14:42.14:0,42,605	0/0:20,0:20:53.81:0,54,777	0/0:21,0:21:60.20:0,60,864	1/1:0,16:16:48.15:595,48,0	0/0:22,0:22:63.21:0,63,892	1/1:4,26:29:75.03:930,75,0	0/0:14,0:14:42.14:0,42,605
chr10	104598952	.	TTGTG	T	624.20	PASS	AB=0.896;AC=7;AF=0.130;AN=54;BaseQRankSum=5.202;DP=533;FS=4.967;HRun=0;HaplotypeScore=108.0479;InbreedingCoeff=0.1321;MQ=69.03;MQ0=9;MQRankSum=-0.670;QD=5.38;ReadPosRankSum=3.284;VQSLOD=1.9654;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:53.72:0,54,868	0/0:12,0:12:23.52:0,24,435	./.	0/0:32,0:20:3.01:0,3,39	0/0:9,0:9:3.01:0,3,72	0/1:10,0:16:10.58:106,0,11	0/1:18,0:18:13.97:14,0,46	0/0:23,0:23:17.92:0,18,167	0/0:9,0:10:17.80:0,18,341	0/0:13,0:12:12.04:0,12,193	0/0:5,0:5:2.83:0,3,67	0/0:19,0:18:11.11:0,11,320	0/0:20,0:20:41.95:0,42,815	0/1:14,0:14:23.55:24,0,384	0/0:23,0:23:38.87:0,39,800	0/0:17,0:19:27.70:0,28,508	0/0:29,0:31:50.08:0,50,1169	0/0:18,0:18:27.07:0,27,572	0/0:15,0:15:7.81:0,8,87	0/0:9,0:14:18.53:0,19,304	0/0:28,0:31:28.54:0,29,403	0/0:9,0:9:6.02:0,6,143	0/0:11,0:11:15.05:0,15,327	1/1:15,23:38:36.11:552,36,0	0/1:9,0:11:11.93:52,0,12	0/0:20,0:21:29.82:0,30,532	0/1:15,0:18:6.75:7,0,300	0/0:16,0:16:30.10:0,30,642
chr10	104598976	.	G	GTA	478.05	PASS	AB=0.888;AC=5;AF=0.089;AN=56;BaseQRankSum=7.081;DP=520;FS=0.000;HRun=0;HaplotypeScore=87.8787;InbreedingCoeff=-0.1035;MQ=52.82;MQ0=15;MQRankSum=1.021;QD=4.39;ReadPosRankSum=3.709;VQSLOD=1.8572;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:92.89:0,93,950	0/0:14,0:14:36:0,36,417	0/0:17,0:9:20.92:0,21,188	0/0:19,0:3:5.91:0,6,38	0/0:12,0:12:17.80:0,18,160	0/1:18,3:20:99:289,0,120	0/1:10,11:21:99:228,0,112	0/0:22,0:19:50.79:0,51,425	0/0:11,0:11:29.96:0,30,320	0/0:13,0:12:32.58:0,33,291	0/0:4,0:3:5.95:0,6,69	0/0:16,0:13:24.18:0,24,308	0/0:15,0:15:42.03:0,42,557	0/0:14,0:14:32.77:0,33,391	0/0:17,0:17:48.09:0,48,616	0/0:13,0:13:39.03:0,39,459	0/0:31,0:31:53.60:0,54,870	0/0:21,0:21:53.87:0,54,561	0/1:17,0:15:5.08:5,0,184	0/0:15,0:15:10.48:0,10,97	0/1:40,0:40:5:5,0,239	0/0:9,0:9:24:0,24,240	0/0:11,0:11:26.79:0,27,301	0/0:38,0:38:68.67:0,69,530	0/1:9,1:10:58.08:58,0,93	0/0:24,0:24:59.80:0,60,593	0/0:24,0:23:7.42:0,7,253	0/0:14,0:13:12.53:0,13,391
chr10	104600675	.	T	TACGCAGATGACCTC	10795.70	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=-3.221;DP=632;FS=8.839;HRun=0;HaplotypeScore=218.9060;InbreedingCoeff=0.9856;MQ=75.95;MQ0=0;MQRankSum=-10.012;QD=56.23;ReadPosRankSum=-4.435;VQSLOD=2.7457;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,108,4077	./.	0/0:16,0:16:27.09:0,27,818	0/0:14,0:14:20.66:0,21,531	0/0:23,0:23:60.21:0,60,2198	1/1:9,8:22:21.07:1424,21,0	1/1:13,8:34:18.06:1220,18,0	1/1:29,0:29:48.12:2063,48,0	0/0:30,0:30:84.26:0,84,2933	0/0:30,0:30:75.24:0,75,2469	0/0:9,0:9:24.05:0,24,690	0/0:33,0:33:63.18:0,63,2096	0/0:14,0:14:27.09:0,27,1004	0/0:26,0:26:57.18:0,57,2146	0/0:18,0:18:36.11:0,36,1347	0/0:16,0:16:33.10:0,33,1108	0/0:38,0:38:93.30:0,93,3341	0/0:33,0:33:84.24:0,84,3043	1/1:17,2:26:33.08:1411,33,0	1/1:6,4:14:11.97:628,12,0	1/1:21,7:35:18.06:1203,18,0	0/0:17,0:17:45.11:0,45,1442	0/0:16,0:16:39.13:0,39,1454	0/0:25,0:25:60.21:0,60,2199	1/1:1,7:10:21.07:1424,21,0	0/0:30,0:30:78.27:0,78,2685	1/1:7,9:21:21.07:1423,21,0	0/0:5,0:5:15.04:0,15,445
chr10	104600808	.	AT	A	4594.41	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.508;DP=658;FS=1.534;HRun=6;HaplotypeScore=66.7603;InbreedingCoeff=0.9999;MQ=79.73;MQ0=0;MQRankSum=-1.981;QD=28.72;ReadPosRankSum=-1.319;VQSLOD=5.0248;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,169,2210	0/0:12,0:12:33.11:0,33,434	0/0:17,0:17:39.01:0,39,462	0/0:18,0:18:48.13:0,48,580	0/0:24,0:24:66.21:0,66,856	1/1:1,17:18:51.13:548,51,0	1/1:3,16:19:39.10:419,39,0	1/1:1,22:23:66.15:701,66,0	0/0:30,0:30:87.28:0,87,1144	0/0:28,0:28:78.25:0,78,1026	0/0:23,0:23:66.21:0,66,868	0/0:18,0:18:42.13:0,42,539	0/0:17,0:17:48.16:0,48,631	0/0:23,0:23:69.22:0,69,901	0/0:20,0:20:45.13:0,45,578	0/0:16,0:16:48.13:0,48,603	0/0:37,0:37:99:0,105,1382	0/0:29,0:29:78.25:0,78,1026	1/1:1,11:12:33.07:347,33,0	1/1:1,17:18:51.13:548,51,0	1/1:1,24:25:63.16:677,63,0	0/0:24,0:24:69.22:0,69,895	0/0:23,0:23:63.20:0,63,822	0/0:31,0:31:81.26:0,81,1066	1/1:2,20:22:60.15:645,60,0	0/0:32,0:32:87.28:0,87,1144	1/1:1,22:23:66.17:709,66,0	0/0:18,0:18:45.15:0,45,592
chr10	104601148	.	CTCT	C	2325.36	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.141;DP=613;FS=0.000;HRun=0;HaplotypeScore=98.3606;InbreedingCoeff=0.9985;MQ=75.17;MQ0=0;MQRankSum=-3.592;QD=38.76;ReadPosRankSum=3.593;VQSLOD=4.4506;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.26:0,93,2051	0/0:7,0:7:21.07:0,21,496	0/0:17,0:17:47.61:0,48,879	0/0:16,0:16:41.87:0,42,774	0/0:33,0:33:99:0,99,2275	1/1:0,19:19:45.15:793,45,0	1/1:1,13:14:35.15:583,35,0	0/0:42,0:42:99:0,123,1642	0/0:18,0:18:54.15:0,54,1158	0/0:26,0:26:78.25:0,78,1712	0/0:26,0:26:78.25:0,78,1792	0/0:17,0:17:51.18:0,51,1163	0/0:15,0:15:45.14:0,45,1017	0/0:16,0:16:48.13:0,48,1032	0/0:18,0:18:54.19:0,54,1262	0/0:20,0:20:60.19:0,60,1316	0/0:21,0:21:63.20:0,63,1417	0/0:19,0:19:57.20:0,57,1325	0/0:25,0:25:69.20:0,69,929	0/0:24,0:24:72.22:0,72,1021	0/0:21,0:21:60.20:0,60,875	0/0:19,0:19:57.18:0,57,1265	0/0:28,0:28:81.25:0,81,1803	0/0:23,0:23:66.21:0,66,1512	1/1:1,26:27:63.21:1092,63,0	0/0:25,0:25:75.25:0,75,1703	0/0:26,0:26:67.08:0,67,925	0/0:20,0:20:60.19:0,60,1289
chr10	104601452	.	CCA	C	7698.02	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.227;DP=698;FS=5.566;HRun=0;HaplotypeScore=82.2061;InbreedingCoeff=0.9998;MQ=78.53;MQ0=0;MQRankSum=0.064;QD=41.39;ReadPosRankSum=-0.753;VQSLOD=6.3922;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,178,3440	0/0:9,0:9:27.09:0,27,543	0/0:21,0:21:63.15:0,63,1056	0/0:13,0:13:33.75:0,34,522	0/0:28,0:27:81.28:0,81,1616	1/1:0,18:18:42.14:671,42,0	1/1:0,33:33:72.25:1149,72,0	1/1:0,20:20:60.19:934,60,0	0/0:25,0:25:75.22:0,75,1433	0/0:30,0:30:90.31:0,90,1829	0/0:22,0:22:66.17:0,66,1183	0/0:25,0:25:75.19:0,75,1433	0/0:16,0:16:48.06:0,48,927	0/0:23,0:23:66.23:0,66,1305	0/0:34,0:34:99:0,99,1956	0/0:23,0:23:69.22:0,69,1336	0/0:30,0:30:90.28:0,90,1754	0/0:29,0:29:84.27:0,84,1656	1/1:0,19:19:54.11:805,54,0	1/1:0,14:14:42.11:643,42,0	1/1:0,39:39:99:1725,108,0	0/0:24,0:24:72.25:0,72,1448	0/0:25,0:25:75.22:0,75,1443	0/0:33,0:33:99:0,99,1896	1/1:0,24:24:63.21:1006,63,0	0/0:28,0:28:84.27:0,84,1637	1/1:0,19:19:48.16:765,48,0	0/0:15,0:15:45.15:0,45,913
chr10	104601611	.	AGTGAGTGTGTGTGTGT	A	873.78	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=1.488;DP=563;FS=17.601;HRun=0;HaplotypeScore=214.7613;InbreedingCoeff=0.8118;MQ=66.45;MQ0=29;MQRankSum=0.307;QD=12.85;ReadPosRankSum=-0.333;VQSLOD=0.7780;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:71.99:0,72,1992	0/0:8,0:8:24.02:0,24,548	0/0:37,0:22:30.23:0,30,505	0/0:45,0:22:51.25:0,51,486	0/0:15,0:14:29.86:0,30,751	1/1:11,0:11:17.99:222,18,0	1/1:20,3:21:35.79:478,36,0	0/0:18,0:18:50.78:0,51,592	0/0:17,0:16:30.95:0,31,623	0/0:18,0:17:45.13:0,45,1480	0/0:16,0:16:36.01:0,36,1023	0/0:17,0:17:42.05:0,42,1018	0/0:21,0:20:44.08:0,44,1476	0/0:28,0:26:51.53:0,52,1333	0/0:23,0:23:60.94:0,61,1402	0/1:14,0:14:65.28:65,0,107	0/0:25,0:25:53.40:0,53,1407	0/0:19,0:16:44.38:0,44,589	0/0:13,0:11:25.19:0,25,847	0/0:9,0:8:14.88:0,15,318	0/0:27,0:24:50.64:0,51,538	0/0:17,0:16:36.73:0,37,923	0/0:14,0:13:35.96:0,36,522	0/0:36,0:35:47.98:0,48,1591	1/1:17,2:18:26.96:256,27,0	0/0:16,0:16:42.08:0,42,986	0/0:15,0:14:37.24:0,37,934	0/0:5,0:4:9:0,9,382
chr10	104601615	.	AGT	A	1230.19	PASS	AB=1.000;AC=33;AF=0.750;AN=44;BaseQRankSum=-1.772;DP=559;FS=15.474;HRun=0;HaplotypeScore=92.0897;InbreedingCoeff=0.5249;MQ=62.97;MQ0=35;MQRankSum=3.195;QD=3.62;ReadPosRankSum=2.767;VQSLOD=0.8263;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:32:0.63:120,0,1	1/1:9,0:8:8.91:61,9,0	./.	./.	0/0:14,4:16:0.82:0,1,21	./.	1/1:22,0:19:2.22:7,2,0	0/0:21,0:21:6.64:0,7,32	1/1:17,0:15:8.55:68,9,0	1/1:21,0:20:5.73:111,6,0	1/1:16,0:16:8.69:57,9,0	1/1:17,1:18:9.41:68,9,0	1/1:19,0:18:17.84:127,18,0	1/1:26,0:24:5.45:33,5,0	1/1:23,0:23:20.62:156,21,0	0/0:5,0:13:0.44:0,0,2	1/1:24,0:24:18.46:145,18,0	1/1:20,0:17:7.70:39,8,0	0/0:12,0:10:9.84:0,10,72	./.	./.	1/1:17,0:16:8.67:66,9,0	1/1:16,0:14:2.98:22,3,0	1/1:29,0:35:24.69:179,25,0	./.	1/1:11,4:15:3.76:61,4,0	0/0:15,0:14:11.84:0,12,79	1/1:5,0:4:5.93:40,6,0
chr10	104601663	.	TGAGAGA	T	384.28	PASS	AB=1.000;AC=14;AF=0.292;AN=48;BaseQRankSum=4.795;DP=513;FS=1.023;HRun=0;HaplotypeScore=136.1105;InbreedingCoeff=0.4391;MQ=46.63;MQ0=47;MQRankSum=-2.541;QD=2.15;ReadPosRankSum=0.222;VQSLOD=2.3129;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:34:20.02:20,0,432	0/0:7,0:6:7.27:0,7,163	./.	./.	0/0:18,0:16:24.98:0,25,680	1/1:7,12:20:5.55:98,6,0	1/1:21,13:31:5.59:62,6,0	0/1:16,0:12:13.37:13,0,28	0/0:26,0:23:13.50:0,14,427	0/0:22,0:19:42.13:0,42,911	0/0:16,0:16:20.97:0,21,330	0/1:20,0:18:32.28:32,0,509	0/0:22,0:21:5.29:0,5,371	0/0:19,0:18:33.11:0,33,747	0/0:24,0:24:8.66:0,9,651	0/0:18,0:17:20.65:0,21,534	0/0:23,0:23:45.05:0,45,804	0/0:22,0:17:35.76:0,36,764	1/1:16,0:13:8.98:105,9,0	0/0:11,0:9:0:0,0,0	./.	0/0:12,0:15:8.99:0,9,165	./.	0/0:45,0:41:53.49:0,53,1031	1/1:6,1:7:6.02:109,6,0	0/0:17,0:17:19.35:0,19,582	1/1:15,0:11:6.02:91,6,0	0/1:11,0:7:4.21:4,0,262
chr10	104601695	.	AGAGAG	A	55.08	PASS	AB=0.864;AC=7;AF=0.125;AN=56;BaseQRankSum=5.673;DP=575;FS=0.000;HRun=0;HaplotypeScore=121.7805;InbreedingCoeff=0.0251;MQ=54.60;MQ0=21;MQRankSum=-4.416;QD=0.66;ReadPosRankSum=0.217;VQSLOD=1.9423;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:47.19:0,47,876	0/0:7,0:7:15.05:0,15,324	0/0:35,0:14:36.11:0,36,440	0/0:39,0:12:23.22:0,23,244	0/0:21,0:19:51.03:0,51,1060	0/1:26,0:25:10.36:10,0,230	0/0:31,0:30:31.07:0,31,376	0/0:15,0:12:13.92:0,14,282	0/0:18,0:18:32.86:0,33,735	0/0:27,0:24:71.79:0,72,1512	0/0:17,0:17:42.14:0,42,758	0/0:16,0:16:12.70:0,13,771	0/0:15,0:15:32.47:0,32,612	0/0:19,0:19:54.18:0,54,1248	0/0:27,0:27:58.07:0,58,1252	0/0:17,0:16:32.73:0,33,804	0/0:26,0:26:72.20:0,72,1389	0/0:23,0:20:50.80:0,51,1105	0/1:10,2:12:66.05:66,0,235	0/1:3,3:4:3.39:3,0,19	1/1:14,0:11:0.47:1,0,0	0/0:23,0:23:57.18:0,57,885	0/0:9,0:8:9.03:0,9,110	0/0:43,0:41:83.77:0,84,1935	0/1:10,0:10:13.70:14,0,195	0/0:19,0:19:56.98:0,57,1157	0/1:12,3:12:68.57:69,0,75	0/0:13,0:11:31.91:0,32,586
chr10	104601705	.	A	AAG	1430.30	PASS	AB=0.571;AC=9;AF=0.161;AN=56;BaseQRankSum=-0.772;DP=592;FS=9.449;HRun=0;HaplotypeScore=99.0014;InbreedingCoeff=0.8400;MQ=59.88;MQ0=12;MQRankSum=-0.998;QD=21.35;ReadPosRankSum=-2.599;VQSLOD=3.0693;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:65.75:0,66,919	0/0:8,0:8:20.71:0,21,306	0/0:41,0:19:45.51:0,46,614	0/0:45,0:17:24.55:0,25,335	0/0:21,0:20:54.17:0,54,762	0/0:31,0:30:30.44:0,30,531	0/0:34,0:33:57.04:0,57,751	1/1:2,13:12:30.07:491,30,0	0/0:18,0:18:48.09:0,48,627	0/0:25,0:23:66.20:0,66,913	0/0:16,0:16:45.02:0,45,625	0/0:15,0:15:45.14:0,45,641	0/0:17,0:17:45.08:0,45,578	0/0:21,0:21:63.17:0,63,859	0/0:28,0:28:72.21:0,72,1001	0/0:16,0:15:39.13:0,39,573	0/0:23,0:23:69.16:0,69,940	0/0:21,0:20:41.17:0,41,551	0/1:3,8:12:5.31:424,0,5	1/1:4,5:9:18.04:279,18,0	1/1:3,11:13:3.01:37,3,0	0/0:23,0:23:57.10:0,57,826	0/0:9,0:9:11.97:0,12,150	0/0:36,0:36:93.17:0,93,1273	0/0:11,0:11:24.04:0,24,352	0/0:26,0:26:78.22:0,78,1058	1/1:7,9:15:23.87:355,24,0	0/0:12,0:12:36.09:0,36,490
chr10	104602307	.	CG	C	1295.50	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.395;DP=459;FS=1.919;HRun=7;HaplotypeScore=49.1339;InbreedingCoeff=0.9824;MQ=76.49;MQ0=0;MQRankSum=0.030;QD=23.13;ReadPosRankSum=0.979;VQSLOD=3.4274;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.26:0,81,1014	0/0:5,0:5:15.05:0,15,189	0/0:16,0:16:44.50:0,45,471	0/0:10,0:10:14.72:0,15,160	0/0:13,0:13:36.10:0,36,433	1/1:1,15:16:42.09:428,42,0	1/1:2,21:23:60.14:612,60,0	0/0:22,0:22:57.18:0,57,711	0/0:16,0:16:45.14:0,45,565	0/0:24,0:24:69.21:0,69,859	0/0:7,0:7:18.06:0,18,226	0/0:19,0:19:54.08:0,54,644	0/0:17,0:17:51.15:0,51,627	0/0:25,0:25:59.83:0,60,701	0/0:30,0:30:84.25:0,84,1031	0/0:8,0:8:24.08:0,24,300	0/0:29,0:29:81.22:0,81,989	0/0:15,0:15:42.12:0,42,515	0/0:11,0:11:27.08:0,27,327	0/0:13,0:13:30.08:0,30,354	0/0:18,0:18:45.14:0,45,564	0/0:13,0:13:36.11:0,36,446	0/0:11,0:11:30.06:0,30,360	0/0:9,0:9:21.07:0,21,263	1/1:2,15:17:39.09:398,39,0	0/0:12,0:12:33.10:0,33,403	0/0:13,0:13:36.10:0,36,437	0/0:17,0:17:45.12:0,45,540
chr10	104602809	.	CT	C	4488.08	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.588;DP=644;FS=1.663;HRun=1;HaplotypeScore=93.7159;InbreedingCoeff=0.9995;MQ=78.75;MQ0=0;MQRankSum=-5.052;QD=34.79;ReadPosRankSum=0.629;VQSLOD=4.7896;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,157,2474	0/0:11,0:11:33.11:0,33,526	0/0:15,0:15:45.13:0,45,667	0/0:20,0:20:53.24:0,53,713	0/0:26,0:26:78.26:0,78,1234	0/0:24,0:23:72.25:0,72,1151	0/0:33,0:33:99:0,99,1545	1/1:1,22:23:66.21:856,66,0	0/0:21,0:21:63.21:0,63,1003	0/0:26,0:26:78.24:0,78,1175	0/0:18,0:18:48.15:0,48,744	0/0:20,0:20:60.20:0,60,959	0/0:21,0:21:63.20:0,63,966	0/0:27,0:27:81.28:0,81,1291	0/0:16,0:16:48.16:0,48,747	0/0:17,0:17:51.17:0,51,805	0/0:27,0:27:81.26:0,81,1261	0/0:22,0:22:66.20:0,66,1020	1/1:1,18:19:51.11:620,51,0	1/1:0,19:19:51.17:661,51,0	1/1:0,49:49:99:1650,129,0	0/0:23,0:23:69.24:0,69,1103	0/0:8,0:8:24.08:0,24,384	0/0:29,0:29:87.29:0,87,1365	0/0:23,0:23:69.21:0,69,1073	0/0:18,0:18:54.18:0,54,863	1/1:0,19:19:54.18:700,54,0	0/0:18,0:18:54.18:0,54,857
chr10	104605878	.	AT	A	1029.62	PASS	AC=10;AF=0.217;AN=46;BaseQRankSum=-2.423;DP=104;FS=3.370;HRun=3;HaplotypeScore=27.8823;InbreedingCoeff=0.5472;MQ=61.21;MQ0=2;MQRankSum=2.649;QD=29.42;ReadPosRankSum=-3.588;VQSLOD=1.6432;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:8.04:0,8,122	0/0:2,0:2:5.23:0,5,48	0/0:4,0:4:12.04:0,12,166	0/0:4,0:4:12.02:0,12,148	0/0:2,0:2:3.01:0,3,41	0/0:4,0:4:9.03:0,9,124	./.	1/1:7,17:23:69.20:840,69,0	0/0:5,0:5:15.04:0,15,192	0/0:1,0:1:2.22:0,2,7	./.	./.	0/0:3,0:3:5.05:0,5,48	0/0:2,0:2:3.01:0,3,41	0/0:2,0:2:6.02:0,6,82	0/0:8,0:8:16.30:0,16,178	0/0:11,0:11:16.13:0,16,245	0/0:6,0:6:12.03:0,12,151	1/1:2,5:7:18.05:208,18,0	1/1:0,1:1:3.01:37,3,0	1/1:1,0:1:3.01:43,3,0	./.	0/0:1,0:1:3.01:0,3,41	./.	0/0:2,0:2:6.02:0,6,83	0/0:1,0:1:3.01:0,3,41	1/1:2,0:2:3.01:37,3,0	0/0:6,0:5:15.05:0,15,207
chr10	104605879	.	TTTATTATTATTATTA	T	691.68	PASS	AB=1.000;AC=13;AF=0.722;AN=18;BaseQRankSum=0.762;DP=104;FS=0.000;HRun=0;HaplotypeScore=59.7816;MQ=61.21;MQ0=2;MQRankSum=-1.179;QD=19.21;ReadPosRankSum=0.067;VQSLOD=1.1869;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:0.47:0,0,1	1/1:1,1:2:3.01:123,3,0	./.	./.	./.	0/0:2,0:4:5.96:0,6,45	./.	./.	1/1:5,0:5:3.01:52,3,0	1/1:0,1:1:3.01:123,3,0	./.	./.	1/1:1,2:3:3.01:123,3,0	./.	./.	1/1:4,3:8:6.02:228,6,0	1/1:7,4:11:3.01:123,3,0	0/1:6,0:6:0.01:0,0,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	104607165	.	GA	G	480.68	PASS	AB=0.860;AC=13;AF=0.232;AN=56;BaseQRankSum=2.418;DP=504;FS=2.945;HRun=12;HaplotypeScore=66.1734;InbreedingCoeff=0.4176;MQ=53.75;MQ0=28;MQRankSum=-1.214;QD=3.43;ReadPosRankSum=1.397;VQSLOD=-0.0038;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:50.63:0,51,460	0/0:9,0:9:11.39:0,11,99	0/0:19,0:7:0:0,0,0	0/0:21,0:6:0:0,0,0	0/1:17,2:23:8.02:8,0,235	1/1:20,1:19:2:22,2,0	0/0:14,0:10:8.14:0,8,66	1/1:6,9:14:21.38:172,21,0	0/0:16,0:17:32.57:0,33,291	0/0:16,1:16:14.11:0,14,248	0/0:13,1:14:9.23:0,9,228	0/0:13,0:13:35.91:0,36,323	0/1:6,1:7:8.45:8,0,67	0/0:13,0:13:33.05:0,33,323	0/0:15,2:17:15.83:0,16,336	0/0:20,1:21:21.86:0,22,401	0/1:20,2:19:2.76:3,0,281	0/0:23,1:24:47.05:0,47,434	1/1:8,9:16:7.69:164,8,0	0/1:5,12:16:15.56:152,0,16	1/1:3,4:8:13.99:99,14,0	0/0:16,0:17:15.56:0,16,134	0/0:20,0:19:29.84:0,30,275	0/0:25,2:28:19.70:0,20,534	0/0:27,0:24:3.82:0,4,18	0/0:22,0:21:38.88:0,39,356	0/0:20,0:18:6.55:0,7,22	0/1:10,0:9:5.12:5,0,134
chr10	104607174	.	A	AAAGAAAG	2686.55	PASS	AB=0.814;AC=21;AF=0.389;AN=54;BaseQRankSum=3.626;DP=525;FS=2.072;HRun=0;HaplotypeScore=111.0027;InbreedingCoeff=0.0586;MQ=52.16;MQ0=30;MQRankSum=-2.738;QD=8.72;ReadPosRankSum=-2.139;VQSLOD=2.2376;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:68.65:0,69,892	0/1:7,0:7:18.49:18,0,97	./.	0/0:11,0:2:0:0,0,0	0/0:26,0:26:27.40:0,27,588	0/1:23,0:21:14.20:14,0,103	0/0:10,0:6:8.14:0,8,66	1/1:22,0:18:20.87:171,21,0	0/1:12,0:19:21.09:21,0,255	0/1:11,0:26:99:323,0,128	0/1:13,0:17:72.56:73,0,178	0/1:9,1:17:99:235,0,231	0/1:10,0:11:28.76:29,0,63	0/0:12,0:12:36.10:0,36,641	0/0:22,0:22:57.12:0,57,840	0/0:20,0:20:51.13:0,51,731	0/1:23,0:24:99:108,0,291	0/1:24,0:25:99:142,0,319	1/1:18,0:17:36.35:353,36,0	1/1:20,0:19:0.87:534,1,0	1/1:6,0:6:16.99:124,17,0	0/0:14,0:15:32.62:0,33,372	0/1:12,0:18:37.25:37,0,212	0/0:29,0:29:28.09:0,28,893	0/0:23,0:20:5.51:0,6,31	0/1:16,1:23:99:342,0,282	1/1:2,19:20:9.50:336,10,0	0/0:8,0:7:18.05:0,18,329
chr10	104607176	.	AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	A	593.45	PASS	AB=0.714;AC=5;AF=0.096;AN=52;BaseQRankSum=1.940;DP=523;FS=5.623;HRun=0;HaplotypeScore=392.7755;InbreedingCoeff=0.5136;MQ=50.08;MQ0=30;MQRankSum=-3.159;QD=10.60;ReadPosRankSum=0.319;VQSLOD=0.7541;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:68.97:0,69,8162	0/0:7,0:7:15.03:0,15,1773	./.	./.	0/0:27,0:27:50.33:0,50,6639	1/1:4,19:21:0.44:577,0,0	0/1:6,0:6:31.81:81,0,32	0/0:22,0:18:27.82:0,28,1479	0/0:19,0:19:27.02:0,27,3138	0/0:27,0:26:72.23:0,72,8659	0/0:19,0:17:39.07:0,39,3791	0/0:18,0:17:33.05:0,33,2689	0/0:11,0:11:18.53:0,19,2069	0/0:12,0:12:36.10:0,36,4873	0/0:22,0:22:60.20:0,60,7745	0/0:19,0:19:51.12:0,51,4248	0/0:28,0:25:65.55:0,66,6849	0/0:30,0:28:59.96:0,60,5866	0/0:17,0:16:35.87:0,36,2017	0/0:20,0:19:40.79:0,41,4020	0/0:7,0:7:19.82:0,20,1250	0/0:13,0:13:33.07:0,33,3514	0/0:19,0:18:40.34:0,40,3249	0/0:29,0:29:77.61:0,78,6666	1/1:5,16:20:3.01:38,3,0	0/0:25,0:24:63.05:0,63,6990	0/0:21,0:20:14.08:0,14,1685	0/0:8,0:7:18.05:0,18,2132
chr10	104607557	.	TAC	T	825.57	PASS	AB=0.936;AC=17;AF=0.327;AN=52;BaseQRankSum=4.202;DP=570;FS=0.000;HRun=0;HaplotypeScore=86.9665;InbreedingCoeff=0.0136;MQ=69.27;MQ0=15;MQRankSum=1.109;QD=2.87;ReadPosRankSum=0.428;VQSLOD=1.6021;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,1:26:3.54:4,0,311	0/0:9,0:9:12.02:0,12,158	./.	./.	0/1:18,0:18:8.77:9,0,248	1/1:11,6:16:18.14:184,18,0	1/1:15,11:29:26.24:239,26,0	0/0:24,0:23:17.84:0,18,140	0/1:17,0:17:15.80:16,0,202	0/0:16,1:18:12.94:0,13,321	0/1:8,2:10:20.83:21,0,84	0/1:14,3:17:69.30:69,0,199	0/0:23,0:23:10.12:0,10,380	0/0:15,0:14:12.03:0,12,159	0/1:13,0:12:41.57:42,0,160	0/0:15,0:15:15.04:0,15,202	0/1:23,7:30:99:128,0,248	0/1:16,1:16:8.78:9,0,255	0/0:11,0:11:11.97:0,12,99	0/0:11,0:16:8.92:0,9,49	0/0:38,0:37:6:0,6,54	0/0:18,0:18:27.05:0,27,341	0/0:10,0:10:21.05:0,21,291	0/1:29,2:31:38.53:39,0,455	1/1:11,14:24:18.05:197,18,0	0/1:19,1:20:17.33:17,0,145	0/0:14,0:16:3.88:0,4,28	0/1:18,0:18:17.80:18,0,297
chr10	104608099	.	GCA	G	523.69	PASS	AB=0.909;AC=7;AF=0.125;AN=56;BaseQRankSum=2.542;DP=451;FS=9.852;HRun=0;HaplotypeScore=70.4485;InbreedingCoeff=0.7530;MQ=79.66;MQ0=6;MQRankSum=-1.136;QD=10.07;ReadPosRankSum=0.274;VQSLOD=2.4278;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:35.80:0,36,394	0/0:2,0:2:5.99:0,6,48	0/0:33,0:17:47.11:0,47,470	0/0:44,0:23:36.01:0,36,502	0/0:12,0:12:32.95:0,33,363	1/1:9,2:11:29.86:270,30,0	1/1:19,1:20:41.92:365,42,0	0/0:25,0:25:71.23:0,71,624	0/0:9,0:9:21.88:0,22,226	0/0:16,0:15:41.57:0,42,502	0/0:6,0:6:14.98:0,15,125	0/0:14,0:14:35.79:0,36,420	0/0:6,0:6:8.92:0,9,163	0/0:11,0:11:15.09:0,15,183	0/0:17,0:17:43.62:0,44,358	0/1:9,1:10:3.66:4,0,186	0/0:21,0:21:45.63:0,46,499	0/0:18,0:18:51.02:0,51,400	0/0:18,0:17:42.03:0,42,335	0/0:8,0:9:13.27:0,13,78	0/0:29,0:28:44.61:0,45,346	0/0:10,0:10:23.68:0,24,205	0/0:11,0:11:27:0,27,299	0/0:26,0:26:59.72:0,60,634	1/1:0,10:10:2.96:19,3,0	0/0:18,0:18:30.41:0,30,331	0/0:12,0:12:25.68:0,26,148	0/0:12,0:12:29.16:0,29,231
chr10	104608134	.	CTCTCTCTCTCTCTCTG	C	1132.21	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=6.110;DP=519;FS=0.723;HRun=0;HaplotypeScore=171.5169;InbreedingCoeff=0.8218;MQ=44.68;MQ0=25;MQRankSum=-5.087;QD=25.16;ReadPosRankSum=-2.483;VQSLOD=2.5897;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:36.53:0,37,1496	0/0:6,0:6:12.04:0,12,617	./.	0/0:13,0:2:6.01:0,6,86	0/0:21,0:20:30.05:0,30,1248	0/0:20,0:19:12.03:0,12,494	0/0:38,0:37:3.91:0,4,304	1/1:10,0:10:15.40:221,15,0	0/0:35,0:35:54.26:0,54,2101	0/0:29,0:28:41.79:0,42,3447	0/0:11,0:11:14.99:0,15,318	0/0:15,0:15:31.01:0,31,1497	0/0:14,0:13:29.64:0,30,1021	0/0:14,0:12:27.01:0,27,744	0/0:18,0:18:39.10:0,39,1783	0/0:17,0:16:36.03:0,36,1470	0/0:22,0:21:24.26:0,24,1996	0/0:20,0:19:48.04:0,48,1490	1/1:13,2:13:13.19:364,13,0	1/1:9,0:10:5.89:151,6,0	./.	0/0:17,0:15:27.02:0,27,768	0/0:8,0:7:17.67:0,18,673	0/0:29,0:28:51.11:0,51,2353	0/0:17,0:16:3.01:0,3,52	0/0:18,0:18:51.11:0,51,2128	1/1:7,2:10:20.76:541,21,0	0/0:14,0:11:21.80:0,22,554
chr10	104608153	.	TGTGTGTGTGC	T	1818.44	PASS	AB=1.000;AC=10;AF=0.192;AN=52;BaseQRankSum=8.901;DP=563;FS=6.088;HRun=0;HaplotypeScore=141.6384;InbreedingCoeff=0.6992;MQ=46.33;MQ0=25;MQRankSum=-6.022;QD=15.03;ReadPosRankSum=-0.220;VQSLOD=2.3716;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:44.49:0,44,1353	0/0:7,0:7:12.04:0,12,521	0/0:22,0:3:9.03:0,9,351	0/0:28,0:10:30.10:0,30,1044	0/0:18,0:18:27.04:0,27,856	0/1:26,0:26:57.99:142,0,58	0/1:38,0:37:24.51:142,0,25	1/1:1,15:16:40.90:604,41,0	0/0:28,0:28:45.10:0,45,1647	0/0:26,0:26:74.94:0,75,2380	0/0:14,0:13:24.08:0,24,1051	0/0:16,0:16:39.12:0,39,1380	0/0:16,0:15:33.96:0,34,1122	0/0:12,0:11:27.09:0,27,1111	0/0:20,0:20:43.93:0,44,1613	0/0:16,0:15:33.03:0,33,1335	0/0:21,0:20:48.15:0,48,1819	0/0:20,0:20:48.14:0,48,1785	1/1:5,10:15:18.07:462,18,0	1/1:3,8:11:6.02:180,6,0	./.	0/0:14,0:12:27.09:0,27,1179	0/0:11,0:10:24.05:0,24,723	0/0:26,0:25:51.17:0,51,1975	./.	0/0:20,0:20:51.54:0,52,1393	1/1:3,12:15:19:447,19,0	0/0:8,0:6:18.02:0,18,573
chr10	104608159	.	TGTGCGTGCGTGC	T	712.06	PASS	AB=1.000;AC=11;AF=0.212;AN=52;BaseQRankSum=7.250;DP=553;FS=4.421;HRun=0;HaplotypeScore=155.5197;InbreedingCoeff=0.7694;MQ=46.55;MQ0=25;MQRankSum=-6.115;QD=6.09;ReadPosRankSum=0.364;VQSLOD=2.1486;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:34.93:0,35,1639	0/0:7,0:7:12.04:0,12,660	0/0:27,0:5:15.05:0,15,642	0/0:29,0:10:30.10:0,30,1363	0/0:15,0:15:18.06:0,18,1022	1/1:20,8:28:14.82:255,15,0	1/1:35,0:34:4.70:220,5,0	0/1:16,0:16:33.03:33,0,150	0/0:25,0:25:36.59:0,37,1979	0/0:24,0:24:51.16:0,51,2486	0/0:13,0:12:23.95:0,24,1255	0/0:18,0:18:33.09:0,33,1631	0/0:16,0:15:30.10:0,30,1568	0/0:12,0:11:24.08:0,24,1392	0/0:20,0:20:36.12:0,36,1935	0/0:16,0:15:33.07:0,33,1674	0/0:20,0:19:42.14:0,42,2170	0/0:20,0:20:42.14:0,42,2263	1/1:13,0:13:5.90:75,6,0	1/1:10,0:10:6.02:94,6,0	./.	0/0:15,0:13:27.09:0,27,1516	0/0:9,0:9:15.05:0,15,852	0/0:25,0:25:42.14:0,42,2327	./.	0/0:22,0:22:30.10:0,30,1609	1/1:15,0:15:14.72:189,15,0	0/0:7,0:5:12.04:0,12,663
chr10	104608161	.	TGC	T	417.31	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=9.755;DP=546;FS=3.818;HRun=0;HaplotypeScore=93.8812;InbreedingCoeff=0.8882;MQ=46.60;MQ0=25;MQRankSum=-4.525;QD=3.63;ReadPosRankSum=-1.908;VQSLOD=1.7852;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:6.07:0,6,361	0/0:7,0:7:11.91:0,12,144	0/0:33,0:9:18.63:0,19,189	0/0:30,0:11:32.06:0,32,315	0/0:13,0:13:21.04:0,21,288	1/1:18,8:26:15.36:108,15,0	1/1:7,15:34:14.65:97,15,0	1/1:16,0:16:9.14:190,9,0	0/0:25,0:25:15.01:0,15,483	0/0:23,0:23:51.96:0,52,678	0/0:13,0:12:24.05:0,24,341	0/0:18,0:18:41.85:0,42,524	0/0:15,0:14:27.18:0,27,333	0/0:12,0:11:24.06:0,24,336	0/0:18,0:18:39.04:0,39,510	0/0:17,0:16:38.84:0,39,487	0/0:19,0:18:38.30:0,38,560	0/0:19,0:19:44.94:0,45,570	1/1:13,0:13:19.63:71,20,0	1/1:10,0:10:5.92:41,6,0	./.	0/0:15,0:13:27.05:0,27,398	0/0:8,0:8:15.03:0,15,182	0/0:25,0:25:5.97:0,6,549	./.	0/0:21,0:21:19.85:0,20,395	1/1:15,0:15:12:80,12,0	0/0:7,0:5:14.99:0,15,177
chr10	104608165	.	TGCGTGC	T	491.35	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=6.636;DP=540;FS=3.195;HRun=0;HaplotypeScore=117.8221;InbreedingCoeff=0.5361;MQ=47.21;MQ0=25;MQRankSum=-6.225;QD=4.43;ReadPosRankSum=0.563;VQSLOD=2.2254;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:33.07:0,33,984	0/0:8,0:8:15.05:0,15,458	0/0:35,0:10:29.13:0,29,716	0/0:32,0:12:36.12:0,36,1031	0/0:11,0:11:21.07:0,21,672	1/1:14,8:22:14.70:257,15,0	1/1:19,15:33:15.05:276,15,0	0/0:17,0:17:25.38:0,25,357	0/0:24,0:24:45.14:0,45,1377	0/0:22,0:22:63.21:0,63,1783	0/0:14,0:13:27.09:0,27,899	0/0:20,0:20:51.07:0,51,1393	0/0:15,0:14:32.23:0,32,1040	0/0:11,0:10:24.08:0,24,871	0/0:20,0:20:48.16:0,48,1410	0/0:17,0:16:39.13:0,39,1217	0/0:19,0:18:48.16:0,48,1415	0/0:19,0:19:45.15:0,45,1431	0/1:12,0:12:7.98:8,0,107	0/1:11,0:11:18.77:19,0,49	./.	0/0:14,0:12:30.10:0,30,977	0/0:9,0:9:21.07:0,21,655	0/0:26,0:26:57.16:0,57,1703	1/1:9,8:16:3:25,3,0	0/0:16,0:16:39.09:0,39,1093	0/1:15,0:15:50.18:50,0,52	0/0:7,0:5:15.05:0,15,442
chr10	104609003	.	G	GTT	4360.36	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=0.004;DP=585;FS=12.057;HRun=7;HaplotypeScore=232.3779;InbreedingCoeff=0.9880;MQ=69.41;MQ0=3;MQRankSum=-3.676;QD=25.95;ReadPosRankSum=-2.084;VQSLOD=1.5320;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:54.03:0,54,593	0/0:7,0:7:21.06:0,21,242	0/0:47,0:24:47.25:0,47,488	0/0:46,0:28:34.93:0,35,368	0/0:25,0:25:36.05:0,36,408	1/1:17,0:17:41.37:256,41,0	1/1:14,0:13:27.10:174,27,0	1/1:5,25:30:69.22:1080,69,0	0/0:17,0:17:48.13:0,48,554	0/0:29,0:29:72.32:0,72,898	0/0:17,0:17:33.04:0,33,369	0/0:14,0:14:27.35:0,27,376	0/0:15,0:15:45.10:0,45,510	0/0:14,0:14:39.11:0,39,453	0/0:22,0:22:60.17:0,60,697	0/0:16,0:16:48.14:0,48,559	0/0:22,0:22:54.14:0,54,624	0/0:9,0:9:27.08:0,27,315	1/1:11,14:26:47.63:736,48,0	1/1:5,18:23:57.19:923,57,0	1/1:2,5:8:12:167,12,0	0/0:18,0:18:42.11:0,42,489	0/0:23,0:24:62.96:0,63,710	0/0:11,0:11:24.07:0,24,275	1/1:24,0:24:38.36:337,38,0	0/0:34,0:34:81.22:0,81,940	1/1:6,17:25:43.67:686,44,0	0/0:6,0:6:12.03:0,12,140
chr10	104609010	.	T	TTGG	2559.44	PASS	AB=0.990;AC=12;AF=0.214;AN=56;BaseQRankSum=3.710;DP=578;FS=17.017;HRun=0;HaplotypeScore=222.0273;InbreedingCoeff=0.6136;MQ=75.06;MQ0=2;MQRankSum=-8.826;QD=16.84;ReadPosRankSum=0.505;VQSLOD=2.0845;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:26:62.65:0,63,889	0/0:7,0:7:21.02:0,21,312	0/0:45,0:26:55.29:0,55,647	0/0:45,0:29:45.73:0,46,476	0/0:23,0:23:39.08:0,39,631	1/1:0,17:19:45.15:1013,45,0	1/1:0,13:14:30.06:607,30,0	0/1:27,0:26:9.32:62,0,9	0/0:16,0:16:48.03:0,48,727	0/0:29,0:29:81.21:0,81,1282	0/0:16,0:16:39.06:0,39,581	0/0:15,0:15:36.10:0,36,590	0/0:18,0:18:54.17:0,54,831	0/0:18,0:18:51.05:0,51,724	0/0:23,0:23:66.15:0,66,1045	0/0:18,0:18:54.16:0,54,874	0/0:24,0:24:63.16:0,63,1011	0/0:10,0:10:30.08:0,30,471	0/1:21,0:21:21.75:27,0,22	0/1:20,0:20:2.89:84,0,3	1/1:7,0:7:9.02:41,9,0	0/0:20,0:20:51.12:0,51,765	0/0:24,0:24:66.19:0,66,1055	0/0:11,0:11:24.08:0,24,392	1/1:0,19:20:39.13:845,39,0	0/0:31,0:31:90.19:0,90,1416	0/1:22,0:23:44.72:54,0,45	0/0:4,0:4:12.04:0,12,204
chr10	104609297	.	CTTT	C	3031.93	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.733;DP=599;FS=0.907;HRun=12;HaplotypeScore=96.6882;InbreedingCoeff=0.9968;MQ=74.28;MQ0=2;MQRankSum=-6.473;QD=26.60;ReadPosRankSum=0.150;VQSLOD=2.9184;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:26:69.21:0,69,1241	0/0:8,0:8:21.05:0,21,368	0/0:42,0:20:36.02:0,36,466	0/0:37,0:20:23.64:0,24,282	0/0:24,0:28:72.14:0,72,1183	0/0:6,0:27:56.78:0,57,436	0/0:0,0:10:26.90:0,27,206	1/1:8,40:48:99:1475,120,0	0/0:17,0:17:45.15:0,45,871	0/0:23,0:23:51.17:0,51,926	0/0:11,0:12:30.08:0,30,522	0/0:18,0:22:60.16:0,60,1068	0/0:11,0:15:45.11:0,45,783	0/0:13,0:13:36.11:0,36,666	0/0:26,0:26:72.25:0,72,1387	0/0:17,0:19:51.11:0,51,899	0/0:35,0:37:81.26:0,81,1531	0/0:19,0:22:57.17:0,57,1058	1/1:6,11:17:33.02:417,33,0	1/1:5,14:19:39.09:489,39,0	1/1:0,9:10:22.65:296,23,0	0/0:13,0:13:27.09:0,27,532	0/0:20,0:20:54.14:0,54,934	0/0:16,0:16:45.15:0,45,865	0/0:2,0:14:26.92:0,27,222	0/0:22,0:22:63.22:0,63,1223	1/1:5,15:20:42.05:530,42,0	0/0:15,0:15:39.13:0,39,731
chr10	104610036	.	CGAGA	C	111.06	PASS	AB=0.930;AC=7;AF=0.152;AN=46;BaseQRankSum=1.923;DP=548;FS=16.190;HRun=0;HaplotypeScore=88.2845;InbreedingCoeff=-0.0104;MQ=65.43;MQ0=6;MQRankSum=0.230;QD=0.71;ReadPosRankSum=1.148;VQSLOD=0.5400;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:24.08:0,24,421	0/0:4,0:4:3.01:0,3,42	./.	./.	./.	0/1:12,0:12:32.74:64,0,33	0/0:15,0:17:2.74:0,3,12	0/0:37,0:37:4.81:0,5,29	0/0:15,0:15:9.03:0,9,166	0/0:12,0:12:3.01:0,3,69	0/0:15,0:15:6.02:0,6,113	0/0:21,0:21:6.02:0,6,132	0/0:17,0:17:11.87:0,12,189	0/0:12,0:12:11.71:0,12,163	0/1:36,1:38:16.28:16,0,389	0/0:12,0:12:5.85:0,6,84	0/0:26,0:24:12.04:0,12,222	0/0:11,0:12:17.80:0,18,279	./.	./.	0/1:33,4:37:28.25:37,0,28	0/0:11,0:11:6.02:0,6,83	0/0:17,0:17:3.01:0,3,69	0/1:36,1:37:16:16,0,492	1/1:16,2:17:3:46,3,0	0/0:21,0:21:10.24:0,10,135	0/1:11,0:14:3.42:47,0,3	0/0:13,0:13:10.83:0,11,156
chr10	104611306	.	T	TA	432.40	PASS	AB=0.625;AC=5;AF=0.093;AN=54;BaseQRankSum=4.526;DP=387;FS=0.000;HRun=0;HaplotypeScore=46.9383;InbreedingCoeff=0.5348;MQ=55.67;MQ0=22;MQRankSum=-2.261;QD=18.80;ReadPosRankSum=1.749;VQSLOD=5.5300;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:99:0,117,1473	0/0:3,0:2:6.02:0,6,83	0/0:41,0:5:10.43:0,10,60	0/0:29,0:9:10.34:0,10,71	0/0:11,0:10:27.01:0,27,290	1/1:4,12:15:17.60:403,18,0	1/1:0,2:2:3.01:39,3,0	0/0:26,0:25:72.52:0,73,891	0/0:10,0:10:20.86:0,21,244	0/0:12,0:11:33.06:0,33,421	0/0:7,0:7:21.07:0,21,289	0/0:8,0:8:21.03:0,21,253	0/0:6,0:6:18.03:0,18,218	0/0:11,0:10:21.82:0,22,314	0/0:6,0:6:15.05:0,15,202	0/0:9,0:9:24:0,24,277	0/0:27,0:27:71.92:0,72,854	0/0:21,0:20:56.42:0,56,686	0/0:23,0:17:47.95:0,48,596	0/0:9,0:8:20.96:0,21,203	0/0:9,0:8:18.04:0,18,231	0/0:1,0:1:3.01:0,3,42	0/0:5,0:4:8.98:0,9,102	0/0:5,0:5:1.30:0,1,153	0/1:2,3:5:7.18:105,0,7	0/0:18,0:18:47.16:0,47,539	0/0:20,0:19:25.51:0,26,303	./.
chr10	104611480	.	AG	A	698.52	PASS	AB=0.833;AC=9;AF=0.167;AN=54;BaseQRankSum=1.029;DP=251;FS=13.084;HRun=8;HaplotypeScore=41.6850;InbreedingCoeff=0.5963;MQ=75.92;MQ0=11;MQRankSum=-3.811;QD=13.97;ReadPosRankSum=-0.805;VQSLOD=1.4723;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:33.53:0,34,383	0/0:1,0:1:0:0,0,0	0/0:18,0:12:36.05:0,36,399	0/0:22,0:14:20.52:0,21,416	0/0:9,0:8:24.07:0,24,288	0/0:5,0:5:12.04:0,12,144	0/0:8,0:5:11.99:0,12,128	1/1:2,14:15:42.06:401,42,0	0/0:2,0:2:3.01:0,3,36	0/0:10,0:10:29.83:0,30,338	0/0:6,0:6:15.05:0,15,181	0/0:10,0:10:27.07:0,27,315	0/0:2,0:2:3.01:0,3,36	0/0:2,0:2:3.01:0,3,36	0/0:5,0:5:12.04:0,12,145	0/0:4,0:4:6.02:0,6,70	0/0:30,0:30:74.90:0,75,880	0/0:14,0:12:30.07:0,30,348	1/1:1,8:6:15.02:144,15,0	1/1:0,4:4:9.01:87,9,0	1/1:2,14:16:20.98:203,21,0	0/0:2,0:2:3.01:0,3,36	0/0:2,0:1:3.01:0,3,36	0/0:22,0:22:42.52:0,43,475	0/0:6,0:6:11.95:0,12,112	0/0:3,0:2:6.02:0,6,72	./.	0/1:4,1:5:13.87:14,0,130
chr10	104612539	.	CCT	C	253.52	PASS	AB=0.944;AC=15;AF=0.278;AN=54;BaseQRankSum=3.888;DP=589;FS=2.516;HRun=0;HaplotypeScore=95.2837;InbreedingCoeff=-0.2456;MQ=67.75;MQ0=8;MQRankSum=0.296;QD=0.96;ReadPosRankSum=0.022;VQSLOD=1.6087;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:27,2:28:26.54:27,0,473	0/1:9,1:10:22.29:22,0,123	0/0:31,0:17:1.25:0,1,4	0/0:39,0:18:3.99:0,4,50	0/1:19,2:21:38.57:39,0,312	0/0:29,0:30:14.65:0,15,108	0/0:18,0:18:4.98:0,5,31	0/0:34,0:34:15.03:0,15,161	0/1:16,0:17:35.39:35,0,245	0/0:23,0:23:39.73:0,40,706	0/1:6,1:11:12.05:12,0,178	0/1:19,1:20:3.61:4,0,326	0/1:14,0:14:1.11:1,0,382	0/1:16,0:16:34.38:34,0,352	0/0:22,0:21:36.12:0,36,540	0/0:22,2:24:4.66:0,5,477	0/1:26,4:30:20.54:21,0,529	0/0:15,0:15:2.96:0,3,427	0/0:10,0:10:9:0,9,95	0/1:21,0:20:18.02:32,0,18	0/1:18,0:18:22.80:23,0,34	0/0:17,1:18:1.78:0,2,443	0/0:18,0:18:21.07:0,21,313	0/1:23,3:27:54.72:55,0,520	./.	0/0:22,0:22:16.18:0,16,470	1/1:18,0:17:10.15:76,10,0	0/1:11,1:11:19.27:19,0,166
chr10	104612566	.	C	CTCTCTCTG	786.55	PASS	AB=0.933;AC=12;AF=0.214;AN=56;BaseQRankSum=2.520;DP=613;FS=5.907;HRun=0;HaplotypeScore=162.2852;InbreedingCoeff=0.3987;MQ=50.80;MQ0=27;MQRankSum=-0.229;QD=4.05;ReadPosRankSum=-3.271;VQSLOD=1.4968;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:54.12:0,54,1085	0/0:8,0:8:21:0,21,271	0/1:16,0:3:3.17:8,0,3	0/0:23,0:6:0.26:0,0,39	0/0:19,0:18:33.08:0,33,720	1/1:25,0:25:21.97:300,22,0	0/1:30,0:29:13.65:106,0,14	0/1:32,0:26:99:153,0,140	0/0:16,0:16:22.44:0,22,598	0/0:32,0:32:86.51:0,87,1459	0/0:11,0:10:5.04:0,5,299	0/0:24,0:20:30.55:0,31,759	0/0:23,0:20:47.84:0,48,853	0/0:30,0:30:69.28:0,69,847	0/0:17,0:16:47.89:0,48,980	0/0:28,0:27:62.72:0,63,998	0/0:30,0:28:39.63:0,40,1070	0/0:25,0:25:45.67:0,46,904	0/1:18,0:18:56.08:56,0,176	1/1:19,0:18:14.71:149,15,0	1/1:23,0:20:5.39:85,5,0	0/0:18,0:18:42.06:0,42,765	0/0:14,0:14:29.83:0,30,505	0/0:33,0:31:66.07:0,66,1202	0/1:5,8:15:0:0,0,0	0/0:30,0:30:52.09:0,52,1015	0/1:16,0:16:56.11:83,0,56	0/0:14,0:10:23.92:0,24,416
chr10	104612568	.	CTG	C	818.45	PASS	AB=1.000;AC=19;AF=0.352;AN=54;BaseQRankSum=7.261;DP=603;FS=0.000;HRun=0;HaplotypeScore=99.0428;InbreedingCoeff=0.4051;MQ=49.81;MQ0=28;MQRankSum=1.440;QD=2.98;ReadPosRankSum=-1.941;VQSLOD=1.6650;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:12.27:0,12,638	0/0:8,0:8:10.17:0,10,162	1/1:16,0:3:5.34:23,5,0	0/1:19,0:4:0.86:1,0,16	0/0:19,0:18:13.32:0,13,373	1/1:25,0:24:11.60:115,12,0	1/1:29,1:29:6.44:59,6,0	0/1:31,0:25:99:175,0,212	0/0:16,0:16:23.67:0,24,386	0/0:31,0:31:38.89:0,39,952	0/1:11,0:10:4.75:5,0,226	0/1:25,0:21:16.30:16,0,426	0/0:23,0:20:36.63:0,37,488	0/1:29,0:29:11.49:11,0,460	0/0:17,0:16:27.56:0,28,546	0/0:27,0:26:33.95:0,34,735	0/0:27,0:25:27.77:0,28,611	0/0:23,1:24:15.29:0,15,594	0/1:18,0:18:67.87:68,0,145	1/1:17,2:18:11.54:134,12,0	1/1:22,0:18:10.25:111,10,0	0/0:16,1:17:22:0,22,377	0/0:16,0:16:32.76:0,33,437	0/0:32,0:30:17.91:0,18,691	./.	0/0:32,0:32:8.42:0,8,731	1/1:12,4:16:26.55:268,27,0	0/1:14,0:10:9.97:10,0,169
chr10	104612580	.	CTCTCTG	C	623.62	PASS	AB=0.977;AC=14;AF=0.259;AN=54;BaseQRankSum=7.918;DP=589;FS=7.848;HRun=0;HaplotypeScore=133.0303;InbreedingCoeff=0.5691;MQ=47.96;MQ0=28;MQRankSum=-5.546;QD=3.60;ReadPosRankSum=-3.636;VQSLOD=0.7150;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:39.46:0,39,1235	0/0:8,0:8:18.06:0,18,474	1/1:8,0:1:0.47:1,0,0	./.	0/0:21,0:20:30.03:0,30,628	0/1:22,0:21:5.08:26,0,5	1/1:24,0:23:2:12,2,0	0/1:27,1:22:99:181,0,169	0/0:16,0:15:33.10:0,33,777	0/0:30,0:30:76.04:0,76,1663	0/0:14,0:13:28.88:0,29,476	0/0:28,0:24:40.87:0,41,1063	0/0:24,0:20:44.70:0,45,964	0/0:26,0:26:35.29:0,35,1167	0/0:18,0:17:48.13:0,48,1000	0/0:30,0:29:57.83:0,58,1767	0/0:27,0:25:54.58:0,55,1315	0/0:23,0:23:56.06:0,56,1355	0/1:15,1:16:14.09:187,0,14	1/1:11,6:17:5.84:29,6,0	1/1:22,1:18:7.93:64,8,0	0/0:18,0:18:21.13:0,21,780	0/0:16,0:16:30.08:0,30,640	0/0:35,0:33:61.56:0,62,1541	0/1:16,0:16:0.05:0,0,0	0/0:33,0:32:86.88:0,87,1756	1/1:15,4:19:22.63:274,23,0	0/0:13,0:10:21:0,21,385
chr10	104612584	.	CTG	C	746.60	PASS	AB=1.000;AC=13;AF=0.260;AN=50;BaseQRankSum=10.071;DP=580;FS=0.519;HRun=0;HaplotypeScore=105.8944;InbreedingCoeff=0.7661;MQ=48.27;MQ0=28;MQRankSum=-4.954;QD=4.85;ReadPosRankSum=-3.746;VQSLOD=1.7254;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:13.87:0,14,845	0/0:8,0:8:17.98:0,18,283	./.	./.	0/0:21,0:20:30.02:0,30,418	1/1:21,2:22:2.28:48,2,0	1/1:22,2:23:5.53:35,6,0	0/1:33,0:26:99:239,0,164	0/0:16,0:15:39.04:0,39,577	0/0:27,1:28:53.67:0,54,1090	0/0:14,0:13:28.89:0,29,443	0/0:29,0:24:39.35:0,39,752	0/0:23,0:19:24.52:0,25,559	0/0:26,0:26:32.01:0,32,834	0/0:19,0:18:53.75:0,54,724	0/0:31,0:30:48.65:0,49,1104	0/0:27,0:25:43.26:0,43,857	0/0:25,0:25:30.78:0,31,870	1/1:12,0:12:5.17:98,5,0	1/1:17,1:18:6.80:85,7,0	1/1:24,0:19:12:132,12,0	0/0:16,0:16:21.08:0,21,469	0/0:17,0:17:31.44:0,31,451	0/0:34,0:32:62.96:0,63,1061	./.	0/0:33,0:32:33.46:0,33,1289	1/1:19,1:20:32.23:268,32,0	0/0:12,0:10:20.82:0,21,248
chr10	104612608	.	CTG	C	193.60	PASS	AB=0.986;AC=13;AF=0.260;AN=50;BaseQRankSum=8.830;DP=594;FS=0.582;HRun=0;HaplotypeScore=118.8149;InbreedingCoeff=0.5798;MQ=48.76;MQ0=28;MQRankSum=-5.281;QD=0.94;ReadPosRankSum=-3.647;VQSLOD=1.0909;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:55.68:0,56,881	0/0:12,0:12:26.99:0,27,388	./.	./.	0/0:21,0:21:39.01:0,39,495	1/1:16,10:25:8.91:80,9,0	1/1:18,6:23:3.28:34,3,0	0/1:34,0:28:0.90:17,0,1	0/0:18,0:17:25.62:0,26,486	0/0:29,0:29:52.90:0,53,1014	0/0:14,0:13:6.73:0,7,186	0/0:24,0:19:40.69:0,41,625	0/0:22,0:18:11.75:0,12,519	0/0:26,0:26:6.02:0,6,716	0/0:21,0:21:55.57:0,56,748	0/0:29,0:28:54.03:0,54,1057	0/0:20,0:19:45.06:0,45,674	0/0:28,0:28:29.28:0,29,713	1/1:13,1:14:21.22:123,21,0	1/1:25,2:25:3.06:14,3,0	1/1:31,0:26:2.12:4,2,0	0/0:20,0:20:15.09:0,15,377	0/0:17,0:16:10.29:0,10,351	0/0:35,0:33:72.76:0,73,1194	./.	0/1:28,0:26:6.85:7,0,933	0/1:21,1:22:3.69:59,0,4	0/0:9,0:8:3.19:0,3,226
chr10	104612618	.	CTCTGTG	C	1695.06	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=9.148;DP=610;FS=5.007;HRun=0;HaplotypeScore=144.8424;InbreedingCoeff=0.8501;MQ=49.33;MQ0=26;MQRankSum=-7.269;QD=8.56;ReadPosRankSum=-2.490;VQSLOD=2.0251;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:68.97:0,69,1446	0/0:14,0:14:33.06:0,33,869	0/0:4,0:2:6.02:0,6,102	./.	0/0:22,0:22:45.08:0,45,1176	1/1:27,0:26:6.02:83,6,0	1/1:25,0:24:2.91:44,3,0	1/1:5,0:32:24.47:381,24,0	0/0:19,0:18:45.07:0,45,999	0/0:32,0:32:72.74:0,73,1666	0/0:13,0:12:21.03:0,21,390	0/0:18,0:13:36.03:0,36,961	0/0:20,0:16:21.80:0,22,980	0/0:25,0:25:59.96:0,60,1466	0/0:24,0:24:15.50:0,15,1278	0/0:27,0:26:69.14:0,69,1701	0/0:17,0:16:38.99:0,39,913	0/0:30,0:30:61.16:0,61,1204	1/1:4,13:17:41.72:631,42,0	1/1:8,20:29:3.34:54,3,0	1/1:8,0:23:7.99:40,8,0	0/0:18,0:18:33.05:0,33,769	0/0:23,0:22:50.88:0,51,1100	0/0:35,0:33:81.15:0,81,2282	1/1:13,0:13:2.72:21,3,0	0/0:28,0:26:73.29:0,73,1347	1/1:6,17:23:29.76:620,30,0	0/0:7,0:6:15.02:0,15,353
chr10	104612620	.	CTGTGTGTG	C	226.69	PASS	AB=0.850;AC=8;AF=0.148;AN=54;BaseQRankSum=7.230;DP=609;FS=6.423;HRun=0;HaplotypeScore=166.5028;InbreedingCoeff=0.5295;MQ=49.55;MQ0=24;MQRankSum=-5.654;QD=2.29;ReadPosRankSum=0.525;VQSLOD=2.4098;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:48.10:0,48,1666	0/0:15,0:15:30.10:0,30,1187	0/0:6,0:3:9.03:0,9,272	./.	0/0:23,0:23:42.14:0,42,1512	1/1:11,15:26:6.02:141,6,0	0/1:12,8:20:62.66:63,0,65	0/0:36,0:32:7.67:0,8,630	0/0:19,0:19:33.11:0,33,1231	0/0:32,0:32:51.18:0,51,1793	0/0:12,0:12:15.04:0,15,478	0/0:18,0:13:30.09:0,30,1080	0/0:19,0:15:36.12:0,36,1270	0/0:25,0:25:45.15:0,45,1695	0/0:22,0:24:42.11:0,42,1444	0/0:26,0:25:51.18:0,51,2036	0/0:17,0:16:27.08:0,27,926	0/0:25,0:30:42.14:0,42,1371	0/1:17,0:17:18.33:18,0,71	0/0:31,0:29:2.62:0,3,10	0/0:26,0:23:9.50:0,9,113	0/0:15,0:16:24.08:0,24,891	0/0:24,0:23:45.15:0,45,1610	0/0:36,0:35:78.25:0,78,2897	1/1:7,5:12:2.88:70,3,0	0/0:28,0:26:42.10:0,42,1348	1/1:21,1:22:20.27:70,20,0	0/0:8,0:7:12.04:0,12,461
chr10	104615276	.	G	GA	1043.37	PASS	AB=0.957;AC=7;AF=0.125;AN=56;BaseQRankSum=0.316;DP=504;FS=0.609;HRun=9;HaplotypeScore=57.8044;InbreedingCoeff=0.7825;MQ=73.32;MQ0=0;MQRankSum=2.281;QD=13.38;ReadPosRankSum=-0.971;VQSLOD=3.0832;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:62.94:0,63,539	0/0:4,0:4:12:0,12,104	0/1:21,1:16:6.24:6,0,28	0/0:18,0:13:1.10:0,1,62	0/0:26,0:26:65.98:0,66,573	1/1:1,9:11:26.91:280,27,0	1/1:4,21:25:13:358,13,0	0/0:30,0:30:57.84:0,58,470	0/0:18,0:18:44.99:0,45,390	0/0:20,0:20:44.98:0,45,391	0/0:18,0:18:53.97:0,54,465	0/0:13,0:13:23.97:0,24,207	0/0:16,0:16:44.99:0,45,391	0/0:9,0:9:26.99:0,27,234	0/0:18,0:18:38.95:0,39,338	0/0:8,0:8:24:0,24,208	0/0:28,0:28:80.98:0,81,703	0/0:30,0:32:82.02:0,82,682	0/0:24,0:24:65.96:0,66,569	0/0:20,0:20:50.98:0,51,442	0/0:11,0:11:26.99:0,27,234	0/0:14,0:14:32.99:0,33,287	0/0:12,0:12:29.98:0,30,260	0/0:18,0:18:50.95:0,51,434	1/1:3,17:20:50.81:542,51,0	0/0:14,0:14:35.99:0,36,312	0/0:21,1:22:20.84:0,21,408	0/0:10,0:10:26.99:0,27,234
chr10	104615436	.	AAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	A	1217.74	PASS	AB=0.968;AC=10;AF=0.185;AN=54;BaseQRankSum=1.317;DP=461;FS=20.203;HRun=0;HaplotypeScore=361.9030;InbreedingCoeff=0.2326;MQ=62.51;MQ0=16;MQRankSum=-5.711;QD=7.12;ReadPosRankSum=-1.869;VQSLOD=0.9771;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:25:36.28:36,0,472	0/0:5,0:5:6.02:0,6,100	./.	0/1:26,0:12:1.54:2,0,2	0/0:12,0:12:11.34:0,11,336	0/0:18,0:18:34:0,34,984	0/0:17,0:16:10.30:0,10,487	0/1:34,0:32:99:281,0,138	0/1:16,0:16:5.47:5,0,380	0/0:20,0:20:27.84:0,28,442	0/0:12,0:12:4.66:0,5,126	0/0:11,0:11:18.06:0,18,596	0/0:13,0:13:21.07:0,21,436	0/0:15,0:15:18.11:0,18,346	0/0:18,0:18:5.44:0,5,194	0/0:10,0:10:0.59:0,1,295	0/0:17,0:16:33.93:0,34,600	0/0:11,0:11:24.01:0,24,391	0/1:13,4:16:14.03:290,0,14	1/1:12,0:12:15.87:209,16,0	1/1:18,0:13:11.59:106,12,0	0/0:13,0:12:26.86:0,27,558	0/0:7,0:7:5.10:0,5,130	0/0:26,0:26:26.87:0,27,619	0/0:11,0:10:17.07:0,17,296	0/0:19,0:19:45.09:0,45,1031	0/1:21,0:21:99:430,0,189	0/0:13,0:13:25.31:0,25,521
chr10	104615496	.	GAAAC	G	1123.13	PASS	AB=0.974;AC=18;AF=0.346;AN=52;BaseQRankSum=-1.089;DP=543;FS=26.430;HRun=0;HaplotypeScore=165.9256;InbreedingCoeff=-0.5476;MQ=32.95;MQ0=58;MQRankSum=2.412;QD=2.90;ReadPosRankSum=2.183;VQSLOD=1.2768;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:26:81.82:82,0,97	0/0:8,0:7:6.02:0,6,74	./.	./.	0/0:14,0:11:6.42:0,6,31	0/1:32,0:29:99:116,0,464	0/0:25,0:20:19.51:0,20,274	0/0:39,0:28:81.10:0,81,866	0/1:21,0:20:26.27:138,0,26	0/1:17,11:26:66.41:66,0,393	0/0:10,0:8:8.62:0,9,73	0/1:19,0:15:47.12:47,0,129	0/0:11,0:9:7.49:0,7,59	0/1:13,0:12:17.49:44,0,17	0/1:19,0:16:36.41:51,0,36	0/0:13,0:8:5.06:0,5,66	0/1:17,0:14:54.69:75,0,55	0/1:13,0:12:99:100,0,116	0/1:28,0:21:38.77:39,0,256	0/1:12,0:11:3.52:4,0,141	0/0:17,0:10:9.72:0,10,76	0/1:25,0:23:45:45,0,73	0/1:16,0:11:4.97:5,0,45	0/1:20,1:18:50.52:51,0,85	0/1:11,0:10:41.46:85,0,41	0/1:19,0:17:74.73:75,0,364	0/1:37,0:36:99:132,0,355	0/1:23,0:17:99:116,0,192
chr10	104615508	.	GAGAAAC	G	1504.89	PASS	AB=0.988;AC=22;AF=0.423;AN=52;BaseQRankSum=-0.329;DP=530;FS=5.422;HRun=0;HaplotypeScore=172.0861;InbreedingCoeff=-0.6719;MQ=33.82;MQ0=57;MQRankSum=1.174;QD=3.78;ReadPosRankSum=-1.620;VQSLOD=2.0759;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:24:51.10:51,0,150	0/1:8,0:7:15.90:16,0,24	./.	./.	0/1:13,0:11:10.09:10,0,13	0/0:33,0:29:9.87:0,10,422	0/0:26,0:23:26.18:0,26,294	0/0:41,0:31:72.90:0,73,901	0/1:15,0:15:11.88:77,0,12	0/1:30,0:27:38.23:38,0,544	0/1:13,0:10:13.84:14,0,86	0/1:18,0:14:73.81:100,0,74	0/1:11,0:10:15.02:15,0,32	0/1:12,0:11:4.67:55,0,5	0/1:14,0:11:3.30:110,0,3	0/1:12,0:7:12.54:13,0,35	0/1:17,0:14:54.23:54,0,81	0/1:14,0:12:71.39:124,0,71	0/1:28,0:21:99:111,0,292	0/1:9,5:13:50.63:51,0,160	0/1:16,0:10:12.40:12,0,85	0/1:24,0:23:26.29:26,0,69	0/0:13,0:9:3.95:0,4,52	0/1:20,0:17:54.19:54,0,85	0/1:11,0:10:21.14:43,0,21	0/1:17,0:16:99:142,0,363	0/1:41,0:40:99:447,0,301	0/1:23,0:16:86.82:87,0,222
chr10	104615510	.	GAAAC	G	2393.19	PASS	AB=0.918;AC=23;AF=0.442;AN=52;BaseQRankSum=-2.297;DP=522;FS=0.469;HRun=0;HaplotypeScore=159.0744;InbreedingCoeff=-0.6057;MQ=34.26;MQ0=54;MQRankSum=2.641;QD=6.07;ReadPosRankSum=-1.340;VQSLOD=1.9365;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:23:99:120,0,157	0/1:4,4:7:23.85:27,0,24	./.	./.	0/1:10,2:10:13.84:52,0,14	0/0:31,0:28:19.01:0,19,412	0/0:24,0:21:27.60:0,28,342	0/0:42,0:31:73.80:0,74,935	0/1:14,0:14:10.05:78,0,10	0/1:28,0:26:32.42:32,0,489	0/1:13,0:10:38.29:38,0,62	0/1:16,0:13:78.48:174,0,78	0/1:2,8:9:31.86:44,0,32	0/1:13,0:12:1.63:104,0,2	1/1:16,1:14:17.33:301,17,0	0/1:8,3:7:40.38:76,0,40	0/1:18,0:15:72.89:97,0,73	0/1:14,0:12:66.27:148,0,66	0/1:26,0:21:99:108,0,338	0/1:14,0:13:18.53:19,0,135	0/1:16,0:10:34.86:35,0,74	0/1:22,1:22:72.26:108,0,72	0/0:11,0:9:4.78:0,5,54	0/1:7,13:17:84.99:136,0,85	0/1:10,0:10:26.03:37,0,26	0/1:17,0:16:99:180,0,342	0/1:42,0:41:99:445,0,280	0/1:22,0:17:99:184,0,202
chr10	104615534	.	G	GAAAC	655.81	PASS	AB=0.834;AC=4;AF=0.077;AN=52;BaseQRankSum=0.599;DP=496;FS=6.347;HRun=0;HaplotypeScore=145.9650;InbreedingCoeff=0.2994;MQ=39.51;MQ0=52;MQRankSum=-1.158;QD=9.94;ReadPosRankSum=-0.106;VQSLOD=2.7067;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:32.57:0,33,490	0/0:7,0:5:5.82:0,6,84	./.	./.	0/0:15,0:14:20.38:0,20,306	0/1:22,4:26:54.24:371,0,54	1/1:21,4:24:9.91:332,10,0	0/0:31,0:19:43.07:0,43,411	0/0:16,0:13:14.50:0,15,173	0/0:24,0:21:51.14:0,51,789	0/0:20,0:14:26.46:0,26,435	0/0:15,0:15:22.74:0,23,317	0/0:14,0:11:12.02:0,12,151	0/0:9,0:6:5.62:0,6,99	0/0:15,0:14:22.16:0,22,254	0/0:5,0:4:5.90:0,6,91	0/0:13,0:10:24.01:0,24,286	0/0:12,0:10:27.03:0,27,360	0/0:11,0:8:14.06:0,14,166	0/0:20,0:19:33.03:0,33,373	0/0:18,0:13:4.93:0,5,53	0/0:25,0:24:32.98:0,33,483	0/0:11,0:10:20.86:0,21,343	0/0:21,0:16:22.63:0,23,369	0/1:11,2:13:27.13:60,0,27	0/0:23,0:20:54.15:0,54,777	0/0:30,0:29:56.66:0,57,563	0/0:23,0:17:20.05:0,20,434
chr10	104615552	.	GAAAC	G	285.76	PASS	AB=0.994;AC=13;AF=0.232;AN=56;BaseQRankSum=4.181;DP=492;FS=19.328;HRun=0;HaplotypeScore=116.3411;InbreedingCoeff=-0.1248;MQ=44.85;MQ0=30;MQRankSum=-7.426;QD=1.50;ReadPosRankSum=-2.683;VQSLOD=0.1605;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,1:35:74.33:0,74,1081	1/1:3,1:2:2.98:55,3,0	0/0:12,0:6:18.04:0,18,282	0/1:15,0:6:6.74:7,0,168	0/0:12,0:11:18.49:0,18,496	0/1:19,0:19:50:50,0,413	0/1:23,0:23:7.38:7,0,683	0/0:23,0:13:24.48:0,24,381	0/0:21,0:18:38.25:0,38,630	0/1:21,0:19:17.67:18,0,484	0/0:16,0:11:20.62:0,21,328	0/1:13,0:13:2.74:3,0,363	0/0:17,0:15:5.56:0,6,407	0/0:9,0:6:15.05:0,15,271	0/1:14,1:15:21.75:22,0,426	0/1:8,0:7:5.95:6,0,145	0/1:19,0:16:47.40:47,0,430	0/1:16,0:14:62.65:63,0,486	0/0:13,0:7:17.57:0,18,284	0/0:21,0:20:38.71:0,39,627	0/0:18,0:14:29.97:0,30,427	0/0:22,0:21:41.11:0,41,621	0/0:8,2:9:18.02:0,18,263	0/0:22,0:18:33.11:0,33,577	0/1:16,0:15:1.59:2,0,409	0/1:21,0:18:99:147,0,567	0/0:24,0:23:8.49:0,8,671	0/0:26,0:21:17.92:0,18,630
chr10	104615925	.	CCCTCCCTCCCCA	C	2226.49	PASS	AB=0.649;AC=5;AF=0.089;AN=56;BaseQRankSum=6.424;DP=405;FS=0.829;HRun=0;HaplotypeScore=131.5241;InbreedingCoeff=0.6930;MQ=73.25;MQ0=9;MQRankSum=-7.253;QD=54.30;ReadPosRankSum=0.710;VQSLOD=3.4250;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:87.30:0,87,4596	0/0:2,0:2:3.01:0,3,181	0/0:53,0:27:47.79:0,48,1407	0/0:41,0:20:32.40:0,32,844	0/0:7,0:7:21.05:0,21,995	1/1:2,10:12:24.08:866,24,0	0/1:11,13:24:4.53:1051,0,5	0/0:20,0:20:26.31:0,26,1242	0/0:17,0:17:48.14:0,48,2378	0/0:9,0:9:27.09:0,27,1509	0/0:5,0:5:15.05:0,15,717	0/0:13,0:13:24.08:0,24,1273	0/0:10,0:10:30.10:0,30,1719	0/0:14,0:14:36.12:0,36,1918	0/0:12,0:12:27.08:0,27,1430	0/0:15,0:15:36.12:0,36,2010	0/0:12,0:12:27.09:0,27,1484	0/0:7,0:7:12.04:0,12,572	0/0:7,0:7:12.04:0,12,619	0/0:10,0:10:21.07:0,21,975	0/0:12,0:12:33.11:0,33,1821	0/0:9,0:9:15.05:0,15,791	0/0:3,0:3:6.02:0,6,283	0/0:20,0:20:60.21:0,60,3240	1/1:1,4:5:12.04:434,12,0	0/0:9,0:9:27.09:0,27,1325	0/0:12,0:12:33.11:0,33,1843	0/0:7,0:7:9.03:0,9,518
chr10	104616904	.	GAAA	G	1728.53	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.208;DP=619;FS=6.560;HRun=12;HaplotypeScore=93.7152;InbreedingCoeff=0.9925;MQ=78.29;MQ0=0;MQRankSum=-1.137;QD=26.59;ReadPosRankSum=3.187;VQSLOD=2.8967;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.29:0,84,1641	0/0:9,0:10:28.34:0,28,535	0/0:22,0:19:24.06:0,24,347	0/0:15,0:15:14.55:0,15,166	0/0:30,0:33:75.24:0,75,1382	1/1:4,23:28:66.11:810,66,0	1/1:1,20:21:51.15:644,51,0	0/0:49,0:53:99:0,114,2075	0/0:15,0:17:45.13:0,45,813	0/0:30,0:30:78.25:0,78,1489	0/0:22,0:24:57.19:0,57,1088	0/0:13,0:15:42.14:0,42,774	0/0:15,0:16:39.11:0,39,720	0/0:25,0:26:69.24:0,69,1294	0/0:25,0:25:60.21:0,60,1145	0/0:17,0:18:42.14:0,42,792	0/0:22,0:22:60.21:0,60,1162	0/0:22,0:23:63.19:0,63,1205	0/0:15,0:18:45.11:0,45,799	0/0:24,0:25:57.18:0,57,1055	0/0:21,0:23:49.39:0,49,892	0/0:20,0:20:54.17:0,54,970	0/0:18,0:18:45.13:0,45,849	0/0:22,0:22:57.20:0,57,1111	1/1:2,14:16:33.10:417,33,0	0/0:13,0:13:36.12:0,36,691	0/0:18,0:19:51.17:0,51,948	0/0:17,0:17:36.12:0,36,690
chr10	104616975	.	GT	G	4346.28	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.472;DP=671;FS=0.000;HRun=3;HaplotypeScore=68.5393;InbreedingCoeff=0.9997;MQ=92.18;MQ0=0;MQRankSum=-2.008;QD=32.68;ReadPosRankSum=-1.919;VQSLOD=4.2738;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1489	0/0:15,0:15:42.14:0,42,605	0/0:29,0:29:78.26:0,78,1101	0/0:26,0:26:75.24:0,75,1044	0/0:23,0:23:66.22:0,66,950	0/0:28,0:28:78.25:0,78,1107	0/0:25,0:25:60.20:0,60,864	1/1:1,32:33:87.23:1050,87,0	0/0:20,0:20:57.15:0,57,797	0/0:28,0:28:84.27:0,84,1179	0/0:25,0:25:75.25:0,75,1079	0/0:26,0:26:78.23:0,78,1101	0/0:19,0:19:54.18:0,54,777	0/0:26,0:26:78.26:0,78,1122	0/0:31,0:31:87.27:0,87,1216	0/0:19,0:19:57.19:0,57,821	0/0:22,0:22:63.21:0,63,906	0/0:23,0:23:66.20:0,66,930	1/1:3,25:28:78.23:953,78,0	1/1:1,25:26:63.20:781,63,0	1/1:0,22:22:60.19:744,60,0	0/0:22,0:22:63.19:0,63,888	0/0:15,0:15:45.15:0,45,640	0/0:22,0:22:60.20:0,60,863	0/0:12,0:12:27.09:0,27,388	0/0:34,0:34:99:0,102,1454	1/1:0,24:24:66.20:818,66,0	0/0:11,0:11:33.11:0,33,474
chr10	104618010	.	TA	T	2068.34	PASS	AB=0.864;AC=17;AF=0.304;AN=56;BaseQRankSum=13.106;DP=519;FS=7.484;HRun=12;HaplotypeScore=68.5184;InbreedingCoeff=0.8750;MQ=73.27;MQ0=0;MQRankSum=-1.586;QD=13.61;ReadPosRankSum=0.313;VQSLOD=3.6636;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,1:35:66.82:0,67,820	0/0:6,0:6:12.01:0,12,115	0/0:20,0:16:3.55:0,4,136	0/1:16,3:17:16.18:16,0,164	0/0:23,2:25:10.63:0,11,466	1/1:1,15:16:35.86:278,36,0	1/1:3,19:22:41.83:325,42,0	1/1:7,15:22:49.68:366,50,0	0/0:20,0:20:51.02:0,51,487	0/0:23,0:22:54.05:0,54,525	0/0:12,0:12:23.97:0,24,220	0/0:17,0:17:42.01:0,42,403	0/0:21,0:21:50.93:0,51,473	0/0:12,0:12:33.05:0,33,328	0/0:22,0:22:59.30:0,59,569	0/0:12,1:13:12.62:0,13,289	0/0:26,0:27:68.96:0,69,677	0/0:31,1:33:73.11:0,73,836	1/1:6,10:16:32.22:240,32,0	1/1:0,12:13:37.30:256,37,0	1/1:3,9:12:26.89:209,27,0	0/0:18,0:18:40.89:0,41,399	0/0:16,0:16:37.88:0,38,365	0/0:21,0:21:57.07:0,57,563	1/1:1,15:17:40.89:307,41,0	0/0:16,1:17:21.83:0,22,388	1/1:3,12:15:35.85:278,36,0	0/0:8,0:8:17.87:0,18,166
chr10	104619417	.	C	CCAAAGGAAGG	14819.61	PASS	AB=0.960;AC=17;AF=0.304;AN=56;BaseQRankSum=-6.279;DP=561;FS=2.882;HRun=0;HaplotypeScore=150.6514;InbreedingCoeff=0.9051;MQ=72.97;MQ0=0;MQRankSum=-14.151;QD=77.59;ReadPosRankSum=-1.891;VQSLOD=4.4032;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,2899	0/0:5,0:5:15.04:0,15,405	0/0:13,0:13:39.02:0,39,1094	0/0:18,0:17:44.65:0,45,913	0/0:39,0:39:99:0,108,3222	1/1:5,12:20:42.14:1973,42,0	1/1:8,9:21:42.14:1991,42,0	1/1:13,6:31:81.25:3101,81,0	0/0:13,0:13:33.11:0,33,1024	0/0:22,0:22:57.20:0,57,1770	0/0:17,0:17:51.13:0,51,1528	0/0:17,0:17:42.14:0,42,1291	0/0:19,0:19:51.15:0,51,1479	0/0:23,0:23:60.18:0,60,1735	0/0:5,0:5:15.04:0,15,406	0/0:10,0:10:30.08:0,30,815	0/0:31,0:31:81.28:0,81,2452	0/0:25,0:24:69.20:0,69,2020	1/1:3,5:12:27.09:1249,27,0	1/1:7,12:21:48.09:2000,48,0	1/1:4,3:12:12.04:385,12,0	0/0:14,0:14:33.09:0,33,908	0/0:23,0:23:60.19:0,60,1791	0/0:24,0:24:69.20:0,69,1895	1/1:6,9:22:42.10:1804,42,0	0/1:23,1:24:94.90:95,0,1547	1/1:7,13:26:45.15:2222,45,0	0/0:16,0:16:45.15:0,45,1430
chr10	104619760	.	GGTTA	G	8645	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=17.611;DP=673;FS=1.478;HRun=0;HaplotypeScore=124.3321;InbreedingCoeff=0.9994;MQ=84.64;MQ0=0;MQRankSum=-11.413;QD=45.26;ReadPosRankSum=-1.922;VQSLOD=4.9102;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,3084	0/0:9,0:9:27.09:0,27,721	0/0:22,0:22:57.19:0,57,1489	0/0:23,0:23:30.63:0,31,1014	0/0:36,0:36:99:0,102,2649	1/1:1,15:16:45.15:854,45,0	1/1:1,22:23:54.18:1003,54,0	1/1:2,24:26:72.22:1297,72,0	0/0:30,0:30:84.29:0,84,2227	0/0:22,0:22:57.20:0,57,1501	0/0:17,0:17:48.16:0,48,1290	0/0:31,0:31:84.27:0,84,2174	0/0:24,0:24:72.25:0,72,1866	0/0:23,0:23:66.23:0,66,1701	0/0:23,0:23:69.24:0,69,1851	0/0:17,0:17:48.16:0,48,1261	0/0:31,0:31:93.28:0,93,2350	0/0:27,0:27:75.26:0,75,1960	1/1:4,12:16:36.10:614,36,0	1/1:2,25:27:66.18:1159,66,0	1/1:3,38:41:93.06:1727,93,0	0/0:23,0:23:66.23:0,66,1713	0/0:9,0:9:24.08:0,24,638	0/0:31,0:31:87.30:0,87,2348	1/1:3,22:25:54.19:1024,54,0	0/0:25,0:25:66.23:0,66,1715	1/1:0,17:17:51.17:967,51,0	0/0:16,0:16:48.16:0,48,1295
chr10	104619968	.	ATGTTTGTT	A	3664.62	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.604;DP=628;FS=5.812;HRun=0;HaplotypeScore=163.9742;InbreedingCoeff=0.9519;MQ=67.72;MQ0=0;MQRankSum=-9.219;QD=22.76;ReadPosRankSum=-1.925;VQSLOD=2.8106;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:69.19:0,69,2610	0/0:3,0:5:8.99:0,9,74	0/0:30,0:27:21.07:0,21,859	0/0:17,0:17:19.88:0,20,738	0/0:29,0:28:63.20:0,63,2438	1/1:6,0:20:30.10:549,30,0	1/1:7,0:16:15.05:280,15,0	1/1:13,13:26:36.02:696,36,0	0/0:32,0:32:60.21:0,60,2401	0/0:36,0:36:78.27:0,78,3229	0/0:23,0:23:45.15:0,45,1870	0/0:28,0:28:57.20:0,57,2235	0/0:21,0:21:48.16:0,48,1961	0/0:26,0:26:57.15:0,57,2005	0/0:16,0:16:33.08:0,33,1163	0/0:12,0:12:27.09:0,27,1123	0/0:31,0:31:78.25:0,78,3110	0/0:23,0:23:57.20:0,57,2354	1/1:9,10:19:30.06:590,30,0	1/1:6,16:22:21.07:531,21,0	1/1:19,6:25:2.93:77,3,0	0/0:16,0:16:38.95:0,39,1410	0/0:21,0:21:63.13:0,63,2512	0/0:29,0:30:69.22:0,69,2764	1/1:8,0:19:30.10:559,30,0	0/0:26,0:26:69.24:0,69,2746	1/1:6,8:13:15.05:384,15,0	0/0:13,0:13:27.09:0,27,1124
chr10	104620948	.	G	GT	1252.52	PASS	AB=0.958;AC=15;AF=0.278;AN=54;BaseQRankSum=-3.697;DP=607;FS=5.387;HRun=1;HaplotypeScore=76.6399;InbreedingCoeff=0.7830;MQ=61.11;MQ0=12;MQRankSum=-2.503;QD=7.12;ReadPosRankSum=-2.587;VQSLOD=-0.2307;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:38:99:0,108,1417	0/0:11,0:11:30.01:0,30,373	0/1:44,1:19:0.61:1,0,434	0/0:30,0:17:40.25:0,40,468	0/0:20,0:20:57.15:0,57,766	1/1:0,17:16:3.01:48,3,0	1/1:2,24:25:5.83:137,6,0	1/1:0,23:15:39.13:545,39,0	0/0:17,0:17:48.16:0,48,668	0/0:22,0:22:55.84:0,56,764	0/0:11,0:11:30.53:0,31,395	0/0:22,0:22:63.67:0,64,857	0/0:19,0:19:54.09:0,54,694	0/0:16,0:16:48.06:0,48,603	0/0:10,0:10:30.10:0,30,415	0/0:16,0:16:48.12:0,48,646	0/0:39,0:39:99:0,114,1496	0/0:18,0:18:51.14:0,51,669	1/1:0,15:14:42.13:602,42,0	1/1:0,8:8:0.47:1,0,0	1/1:0,19:17:3:48,3,0	0/0:24,0:24:69.21:0,69,920	0/0:18,0:18:48.10:0,48,626	0/0:47,0:47:99:0,138,1828	./.	0/0:28,0:28:78.24:0,78,1044	1/1:0,1:21:3:28,3,0	0/0:11,0:11:33.11:0,33,451
chr10	104621523	.	CT	C	2264.45	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=6.982;DP=554;FS=18.383;HRun=11;HaplotypeScore=58.0704;InbreedingCoeff=0.8711;MQ=57.77;MQ0=10;MQRankSum=0.053;QD=13.56;ReadPosRankSum=0.410;VQSLOD=1.8991;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,1:43:77.94:0,78,1017	0/0:12,0:13:32.70:0,33,308	0/1:13,0:6:7.05:7,0,96	0/0:23,0:9:13.54:0,14,100	0/0:29,1:29:67.05:0,67,706	1/1:1,13:15:34.99:277,35,0	1/1:6,15:22:9.03:269,9,0	1/1:10,18:28:50.81:405,51,0	0/0:13,1:14:8.40:0,8,283	0/0:31,1:32:47.50:0,47,683	0/0:22,1:23:32.47:0,32,537	0/0:14,1:16:20.30:0,20,404	0/0:10,0:10:27.07:0,27,285	0/0:11,0:11:28.43:0,28,305	0/0:20,0:20:48.12:0,48,510	0/0:7,0:7:18.05:0,18,192	0/0:30,5:34:13.38:0,13,751	0/0:19,1:20:32.27:0,32,519	1/1:4,16:20:47.92:391,48,0	1/1:3,17:20:38.92:319,39,0	1/1:1,11:14:34.04:258,34,0	0/0:15,0:15:39.10:0,39,413	0/0:19,0:20:39.06:0,39,401	0/0:20,2:23:7.67:0,8,468	1/1:4,14:18:32.96:271,33,0	0/0:14,0:16:10.67:0,11,338	1/1:5,12:17:32.92:270,33,0	0/0:11,1:11:8.43:0,8,290
chr10	104622607	.	C	CG	1199.77	PASS	AB=0.674;AC=9;AF=0.167;AN=54;BaseQRankSum=9.650;DP=511;FS=71.993;HRun=0;HaplotypeScore=53.7549;InbreedingCoeff=0.1328;MQ=52.95;MQ0=27;MQRankSum=-3.998;QD=13.48;ReadPosRankSum=0.179;VQSLOD=1.3914;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:43:99:0,117,1616	0/0:15,0:15:45.15:0,45,629	./.	0/0:2,0:1:2.74:0,3,12	0/0:38,0:38:99:0,102,1425	1/1:3,6:7:18.06:224,18,0	0/1:1,14:15:3.72:378,0,4	0/1:6,8:13:99:214,0,152	0/0:33,0:29:81.27:0,81,1130	0/0:25,0:24:69.23:0,69,965	0/0:21,0:21:57.18:0,57,779	0/0:16,0:15:45.15:0,45,629	0/0:11,0:10:30.10:0,30,419	0/0:16,0:15:42.14:0,42,584	0/0:22,0:21:54.17:0,54,738	0/0:20,0:20:57.18:0,57,780	0/0:32,0:30:81.27:0,81,1133	0/0:19,0:19:54.10:0,54,695	0/1:9,1:9:3.11:3,0,270	0/1:2,6:7:67.42:110,0,67	0/1:6,2:5:25.97:26,0,109	0/0:20,0:20:57.18:0,57,779	0/0:23,0:21:57.18:0,57,788	0/0:20,0:18:51.13:0,51,691	0/1:5,7:11:59.85:212,0,60	0/0:25,0:24:72.20:0,72,985	0/1:6,7:8:23.90:173,0,24	0/0:15,0:13:39.11:0,39,525
chr10	104622717	.	AGT	A	3776	PASS	AB=0.976;AC=17;AF=0.304;AN=56;BaseQRankSum=10.041;DP=754;FS=19.080;HRun=0;HaplotypeScore=101.0004;InbreedingCoeff=0.9369;MQ=60.64;MQ0=6;MQRankSum=-2.654;QD=18.60;ReadPosRankSum=0.465;VQSLOD=2.3944;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,117,1836	0/0:12,0:12:30.10:0,30,488	0/0:52,0:31:37.50:0,38,502	0/1:40,1:27:2.76:3,0,562	0/0:23,0:23:63.19:0,63,983	1/1:2,13:15:32.54:389,33,0	1/1:1,30:32:57.11:691,57,0	1/1:18,8:26:51.16:635,51,0	0/0:30,0:30:90.29:0,90,1437	0/0:29,0:29:69.18:0,69,1062	0/0:22,0:22:19.86:0,20,804	0/0:29,1:30:49.76:0,50,1301	0/0:28,0:28:81.28:0,81,1320	0/0:25,0:25:28.90:0,29,990	0/0:26,1:27:37.86:0,38,1096	0/0:35,0:35:93.30:0,93,1481	0/0:30,2:32:46.83:0,47,1247	0/0:28,1:29:39.58:0,40,1095	1/1:9,3:12:12.03:139,12,0	1/1:0,10:10:21.07:260,21,0	1/1:14,23:36:66.03:802,66,0	0/0:19,0:19:51.17:0,51,836	0/0:23,0:23:62.76:0,63,971	0/0:42,0:42:94.46:0,94,1797	1/1:4,12:14:27.09:338,27,0	0/0:32,0:32:78.25:0,78,1254	1/1:0,14:14:42.13:520,42,0	0/0:13,0:13:39.13:0,39,632
chr10	104622763	.	A	AGT	2818.99	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.404;DP=754;FS=0.460;HRun=0;HaplotypeScore=114.6882;InbreedingCoeff=0.9595;MQ=58.84;MQ0=8;MQRankSum=-1.660;QD=23.11;ReadPosRankSum=-2.836;VQSLOD=3.1977;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,129,1556	0/0:10,0:10:24.06:0,24,285	0/0:32,0:17:29.60:0,30,273	0/0:43,1:29:27.70:0,28,346	0/0:27,0:27:69.17:0,69,821	0/0:20,0:20:29:0,29,170	0/0:36,0:36:5.23:0,5,216	1/1:6,23:29:61.36:834,61,0	0/0:33,0:33:66.18:0,66,796	0/0:23,0:23:59.97:0,60,685	0/0:19,0:19:45.09:0,45,511	0/0:29,0:29:57.14:0,57,693	0/0:17,0:17:27.08:0,27,337	0/0:24,0:24:54.16:0,54,661	0/0:24,0:24:62.48:0,62,681	0/0:30,0:30:72.20:0,72,870	0/0:37,0:37:98.76:0,99,1132	0/0:27,0:27:63.66:0,64,860	1/1:6,7:13:23.52:290,24,0	1/1:6,5:11:15.05:242,15,0	1/1:14,36:49:65.81:1048,66,0	0/0:25,0:24:60.15:0,60,711	0/0:22,0:22:57.14:0,57,673	0/0:52,0:52:99:0,129,1548	0/0:8,0:8:11.66:0,12,67	0/0:21,0:21:60.14:0,60,694	1/1:8,11:19:39.09:578,39,0	0/0:16,0:16:33.09:0,33,398
chr10	104623318	.	TTTATTATTATTA	T	2090.13	PASS	AC=10;AF=0.200;AN=50;BaseQRankSum=7.802;DP=297;FS=0.793;HRun=0;HaplotypeScore=106.1502;InbreedingCoeff=0.6772;MQ=67.24;MQ0=0;MQRankSum=-4.485;QD=26.80;ReadPosRankSum=0.113;VQSLOD=2.8316;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:39:60.21:0,60,3340	./.	./.	./.	0/0:5,0:5:9.03:0,9,387	0/0:1,0:4:3.01:0,3,157	0/0:3,0:3:3.01:0,3,152	1/1:15,6:21:16.71:282,17,0	0/0:8,0:8:9.03:0,9,458	0/0:11,0:11:18.06:0,18,940	0/0:7,0:7:12.93:0,13,674	0/0:4,0:4:3.01:0,3,177	0/0:6,0:6:9.03:0,9,511	0/0:4,0:4:6.02:0,6,349	0/0:8,0:8:12.04:0,12,702	0/0:4,0:4:6.02:0,6,353	0/0:25,0:25:54.19:0,54,2805	0/0:18,0:18:33.11:0,33,1853	1/1:12,11:23:33.06:861,33,0	1/1:4,8:12:11.95:249,12,0	1/1:4,4:8:2.80:36,3,0	0/0:4,0:4:6.02:0,6,211	0/0:9,0:9:6.02:0,6,344	0/0:4,0:4:6.02:0,6,211	0/0:7,0:9:12.04:0,12,571	0/0:12,0:12:19.31:0,19,1009	1/1:1,12:14:23.92:815,24,0	0/0:22,0:22:24.08:0,24,1385
chr10	104624483	.	T	TGG	778.27	PASS	AB=1.000;AC=14;AF=0.292;AN=48;BaseQRankSum=3.998;DP=159;FS=12.535;HRun=7;HaplotypeScore=33.7298;InbreedingCoeff=0.5308;MQ=81.71;MQ0=0;MQRankSum=-0.796;QD=11.97;ReadPosRankSum=-0.631;VQSLOD=-0.4639;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:27.01:0,27,269	0/0:3,0:3:3.01:0,3,35	0/0:8,0:8:16.49:0,16,141	0/0:11,0:9:3.96:0,4,98	0/0:7,0:7:5.97:0,6,70	1/1:1,6:7:15.05:245,15,0	1/1:4,7:11:18.06:295,18,0	1/1:11,0:11:7.33:49,7,0	0/0:5,0:5:9.02:0,9,104	0/0:6,0:6:15.04:0,15,175	./.	0/1:7,0:7:2.33:2,0,162	0/0:3,0:3:6:0,6,61	0/0:7,0:7:15.04:0,15,174	0/0:2,0:2:6.01:0,6,64	0/0:6,0:6:15.04:0,15,171	0/0:4,0:4:3.35:0,3,52	0/1:7,0:7:13.63:14,0,61	0/0:4,0:4:10.33:0,10,49	./.	1/1:3,0:3:0.89:2,1,0	./.	0/0:4,0:4:9.03:0,9,104	0/0:3,0:3:4.82:0,5,40	1/1:3,8:11:18.06:295,18,0	0/0:5,0:5:12.03:0,12,138	1/1:8,0:8:3:26,3,0	./.
chr10	104625290	.	GCCACCCCC	G	588.30	PASS	AB=0.917;AC=9;AF=0.188;AN=48;BaseQRankSum=6.041;DP=170;FS=35.823;HRun=0;HaplotypeScore=78.0549;InbreedingCoeff=0.6115;MQ=78.23;MQ0=1;MQRankSum=-5.761;QD=15.08;ReadPosRankSum=2.190;VQSLOD=0.5050;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.07:0,66,1505	0/0:2,0:2:6.02:0,6,211	0/0:9,0:7:18.03:0,18,527	0/0:8,0:6:6.49:0,6,115	0/0:3,0:3:9.01:0,9,244	0/1:10,1:11:3.48:97,0,3	./.	1/1:6,0:6:15.05:229,15,0	0/0:3,0:3:9.01:0,9,206	0/0:6,0:6:18.04:0,18,422	0/0:7,0:7:21.06:0,21,663	0/0:4,0:4:12.04:0,12,305	0/0:2,0:2:6.02:0,6,228	0/0:3,0:3:6.02:0,6,263	./.	0/0:4,0:4:12.03:0,12,328	0/0:2,0:2:6:0,6,122	0/0:7,0:7:18.02:0,18,614	1/1:5,1:7:2.93:144,3,0	1/1:4,1:5:3.01:72,3,0	./.	0/0:4,0:4:9.02:0,9,208	0/0:3,0:3:9.03:0,9,305	0/0:12,0:12:33.02:0,33,868	./.	0/0:4,0:4:9.03:0,9,294	1/1:10,0:10:15.05:183,15,0	0/0:7,0:7:21.07:0,21,861
chr10	104625291	.	CCA	C	108.43	PASS	AB=0.928;AC=7;AF=0.146;AN=48;BaseQRankSum=5.345;DP=165;FS=27.545;HRun=0;HaplotypeScore=59.7890;InbreedingCoeff=0.4068;MQ=73.87;MQ0=1;MQRankSum=-5.503;QD=2.78;ReadPosRankSum=2.213;VQSLOD=-0.0373;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66:0,66,823	0/0:2,0:2:6.02:0,6,108	0/0:9,0:7:17.98:0,18,251	0/0:6,0:4:6.02:0,6,82	0/0:3,0:3:9.01:0,9,125	0/1:11,0:11:1.56:32,0,2	./.	1/1:6,0:6:11.90:83,12,0	0/0:3,0:3:9:0,9,102	0/0:6,0:6:18.04:0,18,245	0/0:7,0:7:21.06:0,21,341	0/0:4,0:4:12.01:0,12,151	0/0:2,0:2:6.02:0,6,107	0/0:3,0:3:6.02:0,6,107	./.	0/0:4,0:4:12.01:0,12,154	0/0:2,0:2:6:0,6,77	0/0:6,0:6:18.02:0,18,276	0/1:6,1:7:10.40:41,0,10	1/1:4,1:5:2.94:18,3,0	./.	0/0:4,0:4:9.02:0,9,123	0/0:3,0:3:9.03:0,9,160	0/0:11,0:11:32.98:0,33,447	./.	0/0:4,0:4:9.03:0,9,147	0/1:9,1:10:4.36:56,0,4	0/0:7,0:7:21.07:0,21,338
chr10	104625453	.	C	CAT	2328.62	PASS	AB=0.630;AC=15;AF=0.288;AN=52;BaseQRankSum=7.933;DP=229;FS=54.793;HRun=0;HaplotypeScore=59.9209;InbreedingCoeff=0.8139;MQ=43.43;MQ0=16;MQRankSum=-7.120;QD=20.07;ReadPosRankSum=0.973;VQSLOD=1.0673;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:2:2.80:0,3,45	./.	0/0:6,0:5:14.35:0,14,151	0/0:6,0:4:11.90:0,12,143	0/0:5,0:4:9.03:0,9,147	1/1:11,4:15:11.08:322,11,0	1/1:7,15:22:36.12:635,36,0	1/1:6,3:8:15.07:240,15,0	0/0:6,0:4:9.03:0,9,146	0/0:6,0:5:15.05:0,15,245	0/0:7,0:7:18.06:0,18,293	0/0:5,0:5:12.03:0,12,161	0/0:6,0:5:15.02:0,15,217	0/0:4,0:4:9.03:0,9,147	0/0:5,0:4:9.03:0,9,147	0/0:2,0:2:6.02:0,6,98	0/0:11,0:10:21.07:0,21,342	0/0:9,0:8:24.03:0,24,333	1/1:10,2:12:8.42:275,8,0	1/1:4,6:11:12.04:206,12,0	0/1:7,9:17:0.03:0,0,0	./.	0/0:4,0:4:9.03:0,9,147	0/0:14,0:14:30.07:0,30,440	1/1:4,9:12:17.98:302,18,0	0/0:7,0:6:18.03:0,18,263	1/1:2,12:14:30.10:528,30,0	0/0:6,0:4:12.04:0,12,196
chr10	104627033	.	TA	T	763.66	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.617;DP=380;FS=9.915;HRun=9;HaplotypeScore=37.8968;InbreedingCoeff=0.9159;MQ=71.42;MQ0=1;MQRankSum=-1.111;QD=18.18;ReadPosRankSum=1.867;VQSLOD=2.6775;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.20:0,69,796	0/0:13,0:13:36.11:0,36,415	0/0:16,0:5:9.03:0,9,104	0/0:21,0:15:28.26:0,28,280	0/0:11,0:11:27.08:0,27,312	1/1:1,14:15:36.02:330,36,0	1/1:1,9:10:21:191,21,0	0/0:28,1:28:44.74:0,45,761	0/0:10,0:10:26.28:0,26,273	0/0:17,0:17:51.02:0,51,569	0/0:9,0:9:27.08:0,27,312	0/0:7,0:7:21.06:0,21,242	0/0:7,0:7:21.06:0,21,242	0/0:7,0:7:15.03:0,15,164	0/0:8,0:8:15.04:0,15,173	0/0:15,0:15:42.12:0,42,483	0/0:27,0:27:69.16:0,69,773	0/0:18,0:18:42.12:0,42,480	0/0:14,0:13:35.93:0,36,386	0/0:14,0:14:39.11:0,39,443	0/0:4,0:4:12.02:0,12,127	0/0:6,0:6:18.05:0,18,208	0/0:10,0:10:30.09:0,30,346	0/0:2,0:2:6.02:0,6,69	1/1:1,16:17:42.02:384,42,0	0/0:18,0:18:51.14:0,51,580	0/0:17,0:17:48.14:0,48,554	0/0:12,0:12:30.09:0,30,346
chr10	104627414	.	TA	T	8480.22	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.096;DP=741;FS=3.786;HRun=2;HaplotypeScore=79.9918;InbreedingCoeff=1.0000;MQ=83.76;MQ0=0;MQRankSum=-1.067;QD=35.19;ReadPosRankSum=-1.647;VQSLOD=4.5572;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:51:99:0,157,2295	0/0:16,0:16:45.15:0,45,674	0/0:19,0:19:57.16:0,57,816	0/0:24,0:25:69.23:0,69,1005	0/0:24,0:24:72.24:0,72,1079	1/1:2,22:24:60.19:779,60,0	1/1:2,39:41:99:1324,102,0	1/1:1,35:36:99:1309,102,0	0/0:30,0:30:90.29:0,90,1329	0/0:25,0:25:75.25:0,75,1124	0/0:15,0:15:45.15:0,45,674	0/0:17,0:17:48.16:0,48,718	0/0:22,0:22:66.19:0,66,947	0/0:21,0:21:60.19:0,60,878	0/0:28,0:28:84.28:0,84,1259	0/0:15,0:15:45.15:0,45,674	0/0:27,0:27:81.27:0,81,1214	0/0:30,0:30:90.29:0,90,1328	1/1:2,20:22:57.13:706,57,0	1/1:0,29:29:78.25:1013,78,0	1/1:0,28:28:84.27:1091,84,0	0/0:26,0:26:78.26:0,78,1167	0/0:24,0:24:72.24:0,72,1079	0/0:34,0:34:99:0,99,1484	1/1:0,21:21:57.19:740,57,0	0/0:25,0:25:75.25:0,75,1105	1/1:0,40:40:99:1519,117,0	0/0:25,0:25:75.25:0,75,1124
chr10	104628201	.	T	TTGTC	6625.41	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-13.197;DP=694;FS=0.883;HRun=0;HaplotypeScore=108.5365;InbreedingCoeff=0.9604;MQ=69.92;MQ0=5;MQRankSum=-1.551;QD=31.85;ReadPosRankSum=-1.842;VQSLOD=4.5568;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:75.26:0,75,1233	0/0:7,0:7:21.07:0,21,345	0/0:38,0:25:27.56:0,28,424	0/0:49,0:41:53.06:0,53,701	0/0:30,0:30:63.20:0,63,1011	1/1:5,12:18:24.08:587,24,0	1/1:12,17:34:1.85:1110,2,0	1/1:20,11:30:45.15:971,45,0	0/0:17,0:17:36.12:0,36,592	0/0:27,0:27:54.18:0,54,874	0/0:18,0:18:42.13:0,42,660	0/0:25,0:25:45.15:0,45,740	0/0:26,0:26:54.18:0,54,888	0/0:20,0:20:45.15:0,45,740	0/0:23,0:23:51.17:0,51,833	0/0:23,0:23:57.19:0,57,937	0/0:25,0:25:69.24:0,69,1119	0/0:18,0:18:45.15:0,45,740	1/1:10,9:19:27.07:603,27,0	1/1:4,17:22:27.09:606,27,0	1/1:14,24:40:48.16:1174,48,0	0/0:15,0:15:27.09:0,27,441	0/0:17,0:17:45.15:0,45,737	0/0:33,0:33:72.25:0,72,1173	1/1:6,13:19:30.10:734,30,0	0/0:29,0:29:57.19:0,57,936	1/1:8,15:23:36.12:843,36,0	0/0:9,0:9:15.05:0,15,247
chr10	104628438	.	T	TA	5206.95	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-13.668;DP=574;FS=9.292;HRun=8;HaplotypeScore=56.9343;InbreedingCoeff=0.9907;MQ=76.37;MQ0=0;MQRankSum=0.675;QD=27.70;ReadPosRankSum=-1.123;VQSLOD=4.7337;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:84:0,84,763	0/0:4,0:4:11.99:0,12,105	0/0:16,0:16:19.84:0,20,223	0/0:9,0:10:17.46:0,17,139	0/0:35,0:35:81.03:0,81,741	1/1:0,16:16:42.12:485,42,0	1/1:6,18:24:51.15:585,51,0	1/1:6,21:27:63.18:717,63,0	0/0:18,0:18:51.03:0,51,467	0/0:35,0:35:92.95:0,93,832	0/0:24,0:24:68.98:0,69,617	0/0:10,0:10:27:0,27,244	0/0:13,0:13:33.01:0,33,302	0/0:14,0:14:39.02:0,39,357	0/0:19,0:19:48.01:0,48,436	0/0:6,0:6:18.01:0,18,165	0/0:19,0:19:51.03:0,51,467	0/0:26,0:26:62.96:0,63,563	1/1:5,11:16:36.10:407,36,0	1/1:6,26:32:78.23:900,78,0	1/1:3,20:23:60.18:692,60,0	0/0:17,0:17:33:0,33,299	0/0:24,0:24:69.04:0,69,630	0/0:18,0:18:51.02:0,51,467	1/1:1,23:24:63.05:693,63,0	0/0:25,0:25:69.02:0,69,628	1/1:2,24:26:63.07:727,63,0	0/0:20,0:20:57.03:0,57,521
chr10	104629704	.	TC	T	4103.53	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.495;DP=655;FS=2.182;HRun=5;HaplotypeScore=99.1947;InbreedingCoeff=0.9940;MQ=80.24;MQ0=0;MQRankSum=-13.544;QD=28.50;ReadPosRankSum=0.027;VQSLOD=3.4112;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1502	0/0:13,0:13:39.10:0,39,511	0/0:36,0:35:88.63:0,89,1199	0/0:29,0:28:77.73:0,78,1005	0/0:30,0:30:78.25:0,78,1047	1/1:1,16:17:45.13:510,45,0	1/1:3,21:24:60.17:680,60,0	1/1:2,23:25:66.18:740,66,0	0/0:22,0:22:66.22:0,66,902	0/0:36,0:36:96.31:0,96,1301	0/0:21,0:21:51.17:0,51,690	0/0:16,0:16:48.15:0,48,638	0/0:24,0:24:72.24:0,72,983	0/0:23,0:23:69.18:0,69,893	0/0:33,0:33:93.30:0,93,1256	0/0:26,0:26:72.21:0,72,949	0/0:22,0:22:63.21:0,63,862	0/0:18,0:18:45.04:0,45,591	1/1:2,14:16:39.11:442,39,0	1/1:0,17:17:51.15:578,51,0	1/1:5,6:10:12.50:137,13,0	0/0:27,0:27:81.27:0,81,1108	0/0:29,0:29:72.24:0,72,983	0/0:22,0:22:66.22:0,66,903	1/1:2,17:19:48.14:544,48,0	0/0:40,0:40:99:0,114,1540	1/1:3,12:15:42.12:474,42,0	0/0:6,0:6:18.06:0,18,246
chr10	104629715	.	A	AAGAC	10207.73	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.065;DP=666;FS=7.029;HRun=0;HaplotypeScore=123.1511;InbreedingCoeff=0.9960;MQ=86.11;MQ0=0;MQRankSum=-15.778;QD=65.86;ReadPosRankSum=-2.190;VQSLOD=6.4597;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1981	0/0:16,0:16:42.14:0,42,797	0/0:32,0:31:69.24:0,69,1272	0/0:36,0:35:93.31:0,93,1673	0/0:29,0:29:78.24:0,78,1392	1/1:0,18:18:48.16:1276,48,0	1/1:6,17:23:66.19:1646,66,0	1/1:13,14:27:63.21:1607,63,0	0/0:28,0:28:81.28:0,81,1538	0/0:37,0:37:99:0,102,1918	0/0:21,0:21:57.15:0,57,1041	0/0:14,0:14:42.14:0,42,798	0/0:24,0:24:72.25:0,72,1358	0/0:20,0:20:60.21:0,60,1139	0/0:31,0:31:90.31:0,90,1709	0/0:23,0:23:69.22:0,69,1254	0/0:23,0:23:63.17:0,63,1159	0/0:15,0:15:39.13:0,39,740	1/1:6,14:22:60.19:1473,60,0	1/1:3,18:21:54.19:1434,54,0	1/1:1,7:8:15.05:373,15,0	0/0:27,0:27:78.27:0,78,1481	0/0:29,0:29:81.28:0,81,1529	0/0:25,0:25:69.19:0,69,1263	1/1:2,18:22:54.19:1407,54,0	0/0:38,0:38:99:0,111,2073	1/1:2,11:14:39.12:990,39,0	0/0:6,0:6:18.06:0,18,340
chr10	104629860	.	TTG	T	5093.11	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.688;DP=782;FS=1.531;HRun=0;HaplotypeScore=123.9709;InbreedingCoeff=0.9999;MQ=66.41;MQ0=3;MQRankSum=-6.235;QD=27.24;ReadPosRankSum=-0.545;VQSLOD=5.9677;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:98.56:0,99,1578	0/0:16,0:16:42.13:0,42,680	0/0:32,0:25:50.90:0,51,855	0/0:32,0:27:49.32:0,49,715	0/0:35,0:35:99:0,99,1655	1/1:3,15:18:39.08:482,39,0	1/1:5,24:29:50.03:654,50,0	1/1:12,30:42:90.22:1112,90,0	0/0:28,0:28:69.24:0,69,1155	0/0:33,0:33:84.26:0,84,1316	0/0:29,0:29:46.84:0,47,1228	0/0:25,0:25:63.22:0,63,1063	0/0:29,0:29:72.25:0,72,1202	0/0:26,0:26:72.23:0,72,1185	0/0:37,0:37:99:0,99,1657	0/0:28,0:28:84.29:0,84,1406	0/0:33,0:33:81.28:0,81,1348	0/0:24,0:24:63.22:0,63,1037	1/1:3,10:13:30.10:382,30,0	1/1:7,20:27:63.19:795,63,0	1/1:6,15:21:36.50:477,37,0	0/0:31,0:31:90.29:0,90,1452	0/0:24,0:24:66.19:0,66,1041	0/0:34,0:35:88.21:0,88,1644	1/1:4,12:16:42.03:476,42,0	0/0:38,0:38:99:0,105,1663	1/1:1,20:21:57.14:714,57,0	0/0:16,0:16:45.10:0,45,702
chr10	104629922	.	ATGG	A	1329.30	PASS	AB=0.959;AC=13;AF=0.232;AN=56;BaseQRankSum=11.449;DP=779;FS=3.968;HRun=0;HaplotypeScore=169.7983;InbreedingCoeff=0.6929;MQ=64.04;MQ0=4;MQRankSum=-9.840;QD=9.10;ReadPosRankSum=-5.422;VQSLOD=1.8982;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,123,2806	0/0:11,0:11:33.11:0,33,730	0/0:37,0:32:87.33:0,87,1723	0/0:43,0:32:76.35:0,76,1613	0/0:36,0:36:96.33:0,96,2152	1/1:14,0:14:13.11:56,13,0	1/1:17,4:20:32.86:259,33,0	0/1:27,2:29:3.68:720,0,4	0/0:29,0:29:87.25:0,87,1920	0/0:47,0:47:99:0,129,2854	0/0:14,0:14:42.14:0,42,939	0/0:24,0:24:69.24:0,69,1562	0/0:32,0:32:96.32:0,96,2115	0/0:23,0:23:69.24:0,69,1591	0/0:43,0:43:99:0,126,2858	0/0:28,0:28:84.23:0,84,1762	0/0:41,0:41:99:0,123,2758	0/0:26,0:26:75.21:0,75,1672	0/1:11,0:11:95.80:172,0,96	1/1:25,2:27:10.22:63,10,0	1/1:11,1:12:5.90:37,6,0	0/0:31,0:31:93.32:0,93,2036	0/0:28,0:28:84.29:0,84,1912	0/0:49,0:49:99:0,138,3078	1/1:16,0:16:17.56:123,18,0	0/0:30,0:30:84.28:0,84,1805	0/1:15,1:15:43.72:75,0,44	0/0:16,0:16:48.16:0,48,1092
chr10	104629923	.	TG	T	1300.49	PASS	AB=0.770;AC=14;AF=0.250;AN=56;BaseQRankSum=11.304;DP=780;FS=3.889;HRun=2;HaplotypeScore=141.6403;InbreedingCoeff=0.7717;MQ=62.88;MQ0=4;MQRankSum=-9.238;QD=9.09;ReadPosRankSum=-5.256;VQSLOD=-0.6058;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,129,1878	0/0:11,0:11:33.11:0,33,490	0/0:40,0:34:93.21:0,93,1236	0/0:40,0:29:77.72:0,78,1082	0/0:34,0:34:96.32:0,96,1428	1/1:11,3:14:14.54:83,15,0	1/1:16,6:21:34.73:257,35,0	1/1:10,18:28:5.90:685,6,0	0/0:29,0:29:84.24:0,84,1233	0/0:48,0:48:99:0,135,1960	0/0:14,0:14:42.14:0,42,624	0/0:25,0:25:72.23:0,72,1054	0/0:32,0:32:96.31:0,96,1409	0/0:23,0:23:69.23:0,69,1034	0/0:43,0:43:99:0,126,1882	0/0:28,0:28:81.26:0,81,1181	0/0:41,0:41:99:0,123,1828	0/0:27,0:27:75.23:0,75,1102	0/1:8,2:10:67.25:152,0,67	1/1:17,9:26:11.52:81,12,0	0/1:7,5:12:5.15:14,0,5	0/0:31,0:31:93.31:0,93,1374	0/0:29,0:29:87.28:0,87,1282	0/0:49,0:49:99:0,138,2039	1/1:14,2:16:17.80:128,18,0	0/0:30,0:30:84.28:0,84,1226	1/1:8,7:14:4:79,4,0	0/0:16,0:16:48.16:0,48,719
chr10	104629924	.	G	GTGTGTACACACGTGTATGGTGT	22914.91	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=9.568;DP=857;FS=0.723;HRun=0;HaplotypeScore=471.1793;InbreedingCoeff=0.9982;MQ=60.56;MQ0=4;MQRankSum=-15.520;QD=102.76;ReadPosRankSum=-6.424;VQSLOD=2.7761;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,129,6577	0/0:11,0:11:33.11:0,33,1569	0/0:41,0:34:90.28:0,90,3174	0/0:39,0:29:77.16:0,77,3156	0/0:33,0:33:96.33:0,96,4803	1/1:14,10:24:48.16:3395,48,0	1/1:38,0:43:90.80:3853,91,0	1/1:36,0:39:99:6542,117,0	0/0:30,0:30:81.28:0,81,4779	0/0:47,0:47:99:0,135,7095	0/0:14,0:14:42.14:0,42,2312	0/0:24,0:24:72.23:0,72,3717	0/0:32,0:32:96.32:0,96,5216	0/0:23,0:23:69.24:0,69,3889	0/0:42,0:42:99:0,126,6625	0/0:28,0:28:81.27:0,81,4140	0/0:41,0:41:99:0,123,6839	0/0:27,0:27:75.24:0,75,4219	1/1:8,1:11:33.11:1795,33,0	1/1:20,12:37:20.81:1653,21,0	1/1:22,0:24:27.21:1244,27,0	0/0:31,0:31:93.32:0,93,4646	0/0:29,0:29:87.28:0,87,4564	0/0:47,0:49:99:0,138,7638	1/1:13,10:27:39.12:2533,39,0	0/0:29,0:29:84.28:0,84,4436	1/1:10,3:16:20.20:1901,20,0	0/0:16,0:16:48.16:0,48,2367
chr10	104630515	.	GCACACACA	G	1158.32	PASS	AB=0.893;AC=11;AF=0.204;AN=54;BaseQRankSum=5.590;DP=598;FS=8.512;HRun=0;HaplotypeScore=222.0206;InbreedingCoeff=0.5015;MQ=58.55;MQ0=17;MQRankSum=-6.866;QD=8.22;ReadPosRankSum=-1.744;VQSLOD=1.4042;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,1:27:54.49:54,0,403	0/0:7,0:8:12.04:0,12,302	./.	0/0:36,0:12:3.01:0,3,74	0/0:9,0:10:11.90:0,12,338	1/1:13,10:23:12.04:301,12,0	1/1:16,10:27:27.09:653,27,0	0/0:16,0:15:1.25:0,1,3	0/0:26,0:29:42.13:0,42,1440	0/0:21,0:26:57.16:0,57,1485	0/0:11,0:15:15.05:0,15,499	0/0:20,0:22:42.07:0,42,1275	0/0:10,0:11:12.04:0,12,382	0/0:11,0:11:15.05:0,15,449	0/0:16,0:17:21.07:0,21,801	0/0:22,0:25:44.73:0,45,1377	0/0:28,0:31:57.20:0,57,2014	0/1:15,0:17:14.91:15,0,554	0/0:12,0:12:0:0,0,0	1/1:9,0:11:5.80:32,6,0	0/0:36,0:41:6:0,6,67	0/0:24,0:27:29.85:0,30,1077	0/0:10,0:11:15.03:0,15,358	0/0:45,0:47:75.26:0,75,2342	1/1:9,8:18:9.03:224,9,0	0/0:22,0:22:33.10:0,33,925	0/1:14,0:17:33.48:33,0,167	0/0:5,0:5:6.02:0,6,195
chr10	104633868	.	A	AGACAATCT	7679.24	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=4.174;DP=550;FS=13.771;HRun=0;HaplotypeScore=146.3820;InbreedingCoeff=0.9838;MQ=89.40;MQ0=0;MQRankSum=-11.136;QD=65.63;ReadPosRankSum=-2.020;VQSLOD=3.5282;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,129,3453	0/0:6,0:6:15.05:0,15,404	0/0:29,0:29:65.95:0,66,1519	0/0:26,0:26:66.22:0,66,1568	0/0:22,0:22:51.17:0,51,1311	1/1:4,8:12:27.09:1103,27,0	1/1:8,12:20:39.13:1541,39,0	1/1:12,7:20:33.10:1132,33,0	0/0:15,0:15:30.10:0,30,809	0/0:23,0:23:57.20:0,57,1535	0/0:11,0:11:27.09:0,27,720	0/0:16,0:16:42.13:0,42,998	0/0:22,0:22:60.21:0,60,1613	0/0:22,0:22:51.18:0,51,1338	0/0:24,0:24:60.21:0,60,1586	0/0:17,0:17:48.16:0,48,1264	0/0:36,0:36:96.33:0,96,2558	0/0:20,0:20:51.15:0,51,1283	1/1:13,2:14:18.06:677,18,0	1/1:2,3:5:9.03:386,9,0	1/1:20,5:23:18.06:658,18,0	0/0:12,0:12:30.10:0,30,781	0/0:16,0:16:45.15:0,45,1169	0/0:23,0:23:51.16:0,51,1252	1/1:2,7:9:24.08:1028,24,0	0/0:32,0:32:90.31:0,90,2306	1/1:3,8:11:27.09:1155,27,0	0/0:12,0:12:36.12:0,36,933
chr10	104634138	.	AC	A	4060.59	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.092;DP=505;FS=4.125;HRun=4;HaplotypeScore=54.2229;InbreedingCoeff=0.9915;MQ=76.28;MQ0=0;MQRankSum=-1.564;QD=31.24;ReadPosRankSum=-0.271;VQSLOD=3.7626;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,132,1843	0/0:8,0:8:24.06:0,24,318	0/0:17,0:17:51.14:0,51,646	0/0:6,0:7:12.10:0,12,157	0/0:24,0:24:66.21:0,66,903	0/0:12,0:12:36.11:0,36,486	0/0:25,0:25:72.18:0,72,930	1/1:4,26:30:78.24:936,78,0	0/0:15,0:15:45.14:0,45,614	0/0:19,0:19:57.18:0,57,769	0/0:14,0:14:42.14:0,42,584	0/0:13,0:13:39.13:0,39,541	0/0:13,0:13:39.13:0,39,544	0/0:10,0:10:30.07:0,30,397	0/0:17,0:17:51.17:0,51,714	0/0:11,0:11:30.10:0,30,418	0/0:23,0:23:63.21:0,63,882	0/0:16,0:16:45.15:0,45,627	1/1:0,21:21:63.19:754,63,0	1/1:1,24:25:69.21:823,69,0	1/1:3,31:34:84.26:1008,84,0	0/0:13,0:13:39.13:0,39,545	0/0:13,0:13:30.10:0,30,409	0/0:16,0:16:48.14:0,48,653	0/0:11,0:11:33.11:0,33,462	0/0:22,0:22:63.20:0,63,866	1/1:3,17:20:45.13:540,45,0	0/0:8,0:8:24.08:0,24,336
chr10	104634546	.	GCCC	G	2039.28	PASS	AC=10;AF=0.200;AN=50;BaseQRankSum=5.450;DP=193;FS=22.423;HRun=11;HaplotypeScore=41.7686;InbreedingCoeff=0.5342;MQ=65.08;MQ0=1;MQRankSum=-0.528;QD=18.05;ReadPosRankSum=3.351;VQSLOD=0.1957;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:1.91:0,2,59	./.	0/0:3,0:1:0.47:0,0,1	0/0:7,0:7:8.91:0,9,80	0/0:4,0:4:6.01:0,6,86	0/0:4,0:6:5.01:0,5,29	0/0:8,0:9:15.44:0,15,122	1/1:5,4:9:12.01:143,12,0	0/0:3,0:3:6:0,6,70	0/0:3,0:3:3.48:0,3,62	./.	0/0:3,0:3:3.01:0,3,61	0/0:2,0:2:3:0,3,26	./.	0/0:4,0:4:5.98:0,6,85	0/0:2,0:5:11.99:0,12,112	0/0:3,0:3:3.01:0,3,50	0/0:5,0:5:12.04:0,12,241	1/1:5,11:16:27.05:338,27,0	1/1:2,11:13:27:318,27,0	1/1:12,53:65:90.62:1152,91,0	0/0:0,0:1:2.99:0,3,23	0/0:2,0:2:3.01:0,3,61	0/0:4,0:4:0:0,0,0	0/0:2,0:3:6:0,6,61	0/0:2,0:2:3.01:0,3,61	1/1:2,8:10:18.04:236,18,0	0/0:1,0:1:3.01:0,3,61
chr10	104634619	.	GGTGTGTGTGTGTGT	G	99.45	PASS	AC=2;AF=0.042;AN=48;BaseQRankSum=2.130;DP=288;FS=0.000;HRun=0;HaplotypeScore=103.9370;InbreedingCoeff=0.3368;MQ=59.38;MQ0=21;MQRankSum=-2.410;QD=9.95;ReadPosRankSum=0.450;VQSLOD=1.8634;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:37.37:0,37,1374	./.	./.	0/0:23,0:13:3.01:0,3,66	0/0:4,0:4:9.03:0,9,338	1/1:4,6:8:4.90:177,5,0	./.	0/0:12,0:11:9.02:0,9,245	0/0:8,0:8:15.03:0,15,489	0/0:12,0:11:18.05:0,18,754	0/0:7,0:7:18.06:0,18,987	0/0:8,0:7:9.02:0,9,186	0/0:4,0:3:6.02:0,6,212	0/0:10,0:8:21.04:0,21,764	0/0:4,0:4:9.03:0,9,433	0/0:6,0:6:15.03:0,15,488	0/0:17,0:16:42.09:0,42,1339	0/0:12,0:11:24.05:0,24,952	0/0:13,0:13:12.04:0,12,636	0/0:5,0:4:6.02:0,6,231	0/0:38,0:34:22.01:0,22,1003	0/0:2,0:6:3.48:0,3,121	0/0:5,0:4:12.04:0,12,487	0/0:18,0:16:33.11:0,33,1004	./.	0/0:8,0:8:12.03:0,12,331	0/0:12,0:12:21.07:0,21,1106	0/0:2,0:2:3.01:0,3,147
chr10	104634707	.	AGAGAGAGT	A	1075.11	PASS	AB=0.935;AC=11;AF=0.196;AN=56;BaseQRankSum=-4.077;DP=363;FS=0.000;HRun=0;HaplotypeScore=81.6272;InbreedingCoeff=0.2187;MQ=61.22;MQ0=26;MQRankSum=0.024;QD=7.52;ReadPosRankSum=0.937;VQSLOD=1.4955;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:53.78:0,54,627	0/0:2,0:2:3:0,3,25	0/0:11,0:6:11.07:0,11,138	0/0:23,0:12:9.09:0,9,239	0/0:4,0:3:6.01:0,6,73	0/0:7,0:7:0:0,0,0	0/1:2,11:13:0:0,0,0	0/1:23,0:22:99:363,0,192	0/0:9,0:8:11.90:0,12,135	0/0:9,0:7:20.83:0,21,160	0/0:9,0:6:12.45:0,12,101	0/0:13,0:12:23.31:0,23,161	0/0:11,0:8:20.97:0,21,253	0/0:7,0:6:11.01:0,11,149	0/1:11,0:11:34.23:34,0,65	0/0:10,0:10:26.95:0,27,312	0/1:21,0:17:15.02:15,0,463	0/0:15,0:15:41.92:0,42,594	1/1:11,0:10:24.56:207,25,0	0/1:15,0:15:74.74:189,0,75	0/1:28,0:26:99:200,0,183	0/0:4,0:3:5.89:0,6,119	0/0:11,0:10:17.91:0,18,142	0/0:39,0:34:76.97:0,77,888	1/1:7,0:7:17.96:148,18,0	0/0:7,0:7:20.84:0,21,230	0/1:14,0:14:68.08:68,0,423	0/0:5,0:5:14.20:0,14,105
chr10	104634709	.	AGAGAGT	A	1221.51	PASS	AB=0.984;AC=11;AF=0.204;AN=54;BaseQRankSum=-3.364;DP=360;FS=0.513;HRun=0;HaplotypeScore=69.9325;InbreedingCoeff=0.2149;MQ=69.10;MQ0=23;MQRankSum=0.403;QD=8.73;ReadPosRankSum=1.239;VQSLOD=1.8044;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:53.43:0,53,530	0/0:1,0:1:3:0,3,25	0/0:15,0:10:23.08:0,23,255	0/0:25,0:14:8.27:0,8,270	0/0:3,0:3:5.99:0,6,48	./.	0/1:12,1:13:0:0,0,0	0/1:23,0:22:72.84:364,0,73	0/0:9,0:9:14.90:0,15,162	0/0:7,0:5:14.96:0,15,125	0/0:9,0:6:14.98:0,15,125	0/0:12,1:12:26.31:0,26,186	0/0:11,0:8:20.97:0,21,206	0/0:7,0:6:10.99:0,11,124	0/1:10,0:10:6.94:7,0,87	0/0:10,0:10:26.95:0,27,268	0/1:21,1:18:86.48:86,0,328	0/0:15,0:15:34.07:0,34,463	1/1:11,0:11:28.28:235,28,0	0/1:15,0:15:50.79:211,0,51	0/1:26,0:24:99:201,0,119	0/0:4,0:3:5.89:0,6,98	0/0:10,0:9:17.91:0,18,142	0/0:39,0:34:76.21:0,76,708	1/1:6,0:7:17.96:148,18,0	0/0:7,0:7:20.28:0,20,185	0/1:13,0:13:99:119,0,281	0/0:5,0:5:13.53:0,14,102
chr10	104635885	.	GA	G	660.33	PASS	AB=0.832;AC=13;AF=0.250;AN=52;BaseQRankSum=4.192;DP=369;FS=2.803;HRun=13;HaplotypeScore=48.9201;InbreedingCoeff=0.3515;MQ=63.41;MQ0=9;MQRankSum=1.347;QD=4.96;ReadPosRankSum=1.483;VQSLOD=1.3697;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,1:39:57.57:0,58,769	0/0:4,0:4:5.85:0,6,43	0/0:10,1:7:18.47:0,18,160	0/1:13,1:9:15.15:15,0,52	0/0:8,0:11:20.87:0,21,189	./.	0/0:2,0:1:0.47:0,0,1	1/1:3,9:13:19.87:137,20,0	0/0:18,1:19:14.14:0,14,294	0/1:11,1:12:0.97:1,0,138	0/0:17,0:17:33:0,33,306	0/1:14,1:15:0.89:1,0,149	0/1:5,0:7:4.17:4,0,98	0/0:12,0:13:38.89:0,39,359	0/0:12,0:12:27.04:0,27,258	0/0:16,0:16:35.89:0,36,316	0/0:22,0:24:59.99:0,60,571	0/1:12,2:13:10.83:11,0,209	1/1:6,7:13:12.46:159,12,0	0/1:4,8:12:11.35:91,0,11	1/1:2,18:22:45.83:318,46,0	0/0:8,0:8:12.01:0,12,112	0/0:14,0:14:24.04:0,24,233	0/0:12,0:12:33:0,33,311	./.	0/0:14,0:14:21.89:0,22,194	0/1:2,8:10:11.69:75,0,12	0/0:17,0:15:33.04:0,33,315
chr10	104636004	.	C	CG	1051.63	PASS	AB=0.989;AC=34;AF=0.654;AN=52;BaseQRankSum=-0.967;DP=290;FS=1.243;HRun=13;HaplotypeScore=51.6332;InbreedingCoeff=0.1262;MQ=79.31;MQ0=2;MQRankSum=-1.736;QD=4.03;ReadPosRankSum=-1.886;VQSLOD=0.0489;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:4.20:18,0,4	./.	0/1:16,0:14:11.52:31,0,12	0/1:10,1:12:12.79:13,0,20	./.	0/1:5,0:5:0:0,0,0	1/1:19,0:19:9.31:60,9,0	1/1:17,0:17:22.48:113,22,0	0/1:8,0:8:0:0,0,0	0/1:9,0:9:14.43:18,0,14	0/1:5,0:5:0:0,0,0	0/0:7,0:7:2.94:0,3,20	0/0:9,0:9:0.88:0,1,2	1/1:9,0:9:2.94:18,3,0	1/1:6,0:6:2.56:18,3,0	0/1:2,0:2:0:0,0,0	0/1:24,0:24:24.47:24,0,28	0/1:16,0:16:13.50:13,0,35	1/1:13,0:13:22.59:119,23,0	1/1:9,0:9:8.68:53,9,0	1/1:27,9:35:73.55:526,74,0	0/1:1,0:1:0:0,0,0	1/1:8,0:8:5.12:29,5,0	0/0:8,0:9:1.95:0,2,6	1/1:8,0:8:2.99:23,3,0	0/1:7,0:7:0:0,0,0	1/1:8,0:8:17.23:91,17,0	1/1:2,0:2:0.47:1,0,0
chr10	104636010	.	G	GT	1786.15	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=-5.682;DP=279;FS=23.638;HRun=0;HaplotypeScore=35.8166;InbreedingCoeff=0.7007;MQ=75.09;MQ0=2;MQRankSum=0.008;QD=19.63;ReadPosRankSum=7.186;VQSLOD=2.4093;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:37.85:0,38,309	./.	0/0:14,0:11:16.69:0,17,187	0/0:13,0:12:29.97:0,30,279	0/0:5,0:5:5.99:0,6,50	0/0:5,0:5:8.95:0,9,69	0/0:14,0:14:26.19:0,26,181	1/1:5,13:18:35.97:387,36,0	0/0:11,0:11:17.95:0,18,150	0/0:6,0:6:13.80:0,14,120	0/0:4,0:4:6:0,6,54	0/0:8,0:8:14.97:0,15,138	0/0:7,0:7:8.71:0,9,82	0/0:9,0:9:22.50:0,23,178	0/0:6,0:6:11.24:0,11,74	0/0:2,0:2:3:0,3,27	0/0:20,0:20:34.38:0,34,305	0/0:14,0:14:34.19:0,34,297	1/1:1,10:11:16.09:346,16,0	1/1:1,9:10:14.05:148,14,0	1/1:12,24:35:75.01:853,75,0	0/0:3,0:3:9:0,9,79	0/0:8,0:8:16.96:0,17,141	0/0:12,0:12:20.97:0,21,177	0/1:8,0:8:0.42:0,0,31	0/0:6,0:6:9:0,9,78	1/1:1,7:8:1.16:210,1,0	0/0:2,0:2:2.96:0,3,19
chr10	104636807	.	G	GT	2146.46	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-8.830;DP=460;FS=3.679;HRun=9;HaplotypeScore=46.8554;InbreedingCoeff=0.9759;MQ=71.78;MQ0=2;MQRankSum=-2.439;QD=22.13;ReadPosRankSum=-2.783;VQSLOD=3.2668;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:77.97:0,78,677	0/0:11,0:11:29.99:0,30,258	0/0:17,0:13:8.04:0,8,137	0/0:13,0:11:23.44:0,23,181	0/0:28,0:28:80.06:0,80,690	0/0:13,0:13:32.96:0,33,279	0/0:16,0:16:41.98:0,42,364	1/1:9,22:29:60.12:643,60,0	0/0:15,0:15:32.97:0,33,282	0/0:26,0:26:65.98:0,66,573	0/0:8,0:9:20.03:0,20,162	0/0:13,0:13:32.95:0,33,283	0/0:12,0:12:26.97:0,27,230	0/0:11,0:11:26.99:0,27,234	0/0:12,0:12:32.98:0,33,286	0/0:13,0:13:38.99:0,39,339	0/0:25,0:25:48.30:0,48,567	0/0:20,0:20:56.92:0,57,482	1/1:7,13:20:42.11:459,42,0	1/1:4,12:18:44.79:456,45,0	1/1:0,13:13:30.08:332,30,0	0/0:8,0:8:21:0,21,182	0/0:8,0:8:24:0,24,208	0/0:9,0:9:14.99:0,15,130	0/0:16,0:16:41.99:0,42,365	0/0:21,0:21:56.93:0,57,484	1/1:1,14:15:39.11:431,39,0	0/0:18,0:18:38.97:0,39,338
chr10	104638268	.	CG	C	1204.95	PASS	AB=1.000;AC=15;AF=0.288;AN=52;BaseQRankSum=2.719;DP=419;FS=6.895;HRun=2;HaplotypeScore=44.0611;InbreedingCoeff=0.8448;MQ=40.76;MQ0=54;MQRankSum=-4.205;QD=11.48;ReadPosRankSum=0.070;VQSLOD=1.4757;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:17:29.54:0,30,317	0/0:4,0:4:12.02:0,12,140	./.	./.	0/0:10,0:9:17.68:0,18,165	0/1:12,0:8:2.45:35,0,2	1/1:19,1:19:2.54:136,3,0	1/1:5,15:17:44.77:392,45,0	0/0:13,0:11:20.97:0,21,198	0/0:15,0:15:38.79:0,39,412	0/0:10,0:8:17.86:0,18,143	0/0:12,0:9:14.06:0,14,144	0/0:11,0:10:17.03:0,17,148	0/0:8,0:8:8.99:0,9,75	0/0:12,0:10:18.30:0,18,203	0/0:13,0:13:29.66:0,30,293	0/0:32,0:32:36.78:0,37,614	0/0:27,0:25:37.97:0,38,366	1/1:8,3:8:14.98:145,15,0	1/1:8,5:13:27.68:237,28,0	1/1:5,1:5:9.01:88,9,0	0/0:9,0:9:11.41:0,11,100	0/0:21,0:18:25.06:0,25,236	0/0:15,0:13:14.53:0,15,145	1/1:10,0:11:18.41:188,18,0	0/0:21,0:17:42.49:0,42,447	1/1:3,8:11:15.03:167,15,0	0/0:14,0:7:9.47:0,9,94
chr10	104639444	.	AT	A	2471.41	PASS	AB=0.941;AC=12;AF=0.214;AN=56;BaseQRankSum=9.404;DP=614;FS=5.447;HRun=10;HaplotypeScore=68.2251;InbreedingCoeff=0.7820;MQ=79.99;MQ0=0;MQRankSum=0.042;QD=15.45;ReadPosRankSum=-1.824;VQSLOD=3.5358;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:47,2:52:82.71:0,83,1292	0/0:3,0:4:11.86:0,12,107	0/1:13,2:15:31.12:31,0,128	0/1:20,0:20:12.81:13,0,271	0/0:21,0:21:51.14:0,51,563	0/0:17,0:17:48.13:0,48,531	0/0:27,0:28:69:0,69,729	1/1:8,25:33:46.80:615,47,0	0/0:19,0:19:51.14:0,51,564	0/0:20,0:20:48.12:0,48,523	0/0:12,0:12:30.07:0,30,325	0/0:25,0:27:72.01:0,72,762	0/0:23,0:25:59.97:0,60,624	0/0:19,0:21:53.79:0,54,544	0/0:15,0:15:45.11:0,45,486	0/0:27,0:27:72.19:0,72,789	0/0:25,0:25:60.12:0,60,638	0/0:18,0:18:42.09:0,42,454	1/1:5,19:24:56.95:490,57,0	1/1:0,17:17:47.98:417,48,0	1/1:5,28:33:80.97:703,81,0	0/0:33,0:33:84.19:0,84,905	0/0:19,0:21:53.81:0,54,559	0/0:21,0:21:57.15:0,57,631	0/0:15,0:15:39.09:0,39,423	0/0:25,1:27:45.95:0,46,705	1/1:1,17:18:17.80:383,18,0	0/0:6,0:6:15.04:0,15,166
chr10	104639969	.	AGAAG	A	1340.39	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=5.757;DP=588;FS=6.106;HRun=0;HaplotypeScore=97.1309;InbreedingCoeff=0.9299;MQ=65.52;MQ0=7;MQRankSum=-0.985;QD=19.43;ReadPosRankSum=3.064;VQSLOD=2.8880;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:57.20:0,57,1306	0/0:9,0:9:12.04:0,12,261	./.	./.	0/0:22,0:22:39.12:0,39,861	0/0:14,0:14:27.09:0,27,614	0/0:29,0:29:41.86:0,42,821	0/0:26,0:24:5.99:0,6,62	0/0:20,0:20:35.81:0,36,692	0/0:23,0:23:36.12:0,36,785	0/0:12,0:12:24.07:0,24,522	0/0:20,0:20:39.13:0,39,850	0/0:18,0:18:21.06:0,21,430	1/1:8,10:18:27.09:420,27,0	0/0:22,0:22:33.11:0,33,735	0/0:19,0:19:24.08:0,24,564	1/1:13,18:31:42.14:640,42,0	1/1:11,9:20:27.09:420,27,0	0/0:14,0:18:15.04:0,15,224	0/0:12,0:12:11.99:0,12,115	0/0:14,0:39:45.10:0,45,710	0/0:19,0:19:33.11:0,33,723	0/0:20,0:20:27.09:0,27,637	0/0:34,0:33:57.65:0,58,1267	0/0:13,0:13:24.08:0,24,566	0/0:22,0:21:27.09:0,27,619	0/0:16,0:23:24.08:0,24,408	0/0:9,0:9:21.07:0,21,490
chr10	104641647	.	CCT	C	731.20	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.044;DP=499;FS=2.263;HRun=0;HaplotypeScore=90.2367;InbreedingCoeff=0.9303;MQ=57.29;MQ0=2;MQRankSum=-7.980;QD=17.00;ReadPosRankSum=1.667;VQSLOD=3.6269;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,1996	0/0:6,0:6:18.06:0,18,345	0/0:18,0:15:28.42:0,28,559	0/0:30,0:26:70.41:0,70,1213	0/0:14,0:14:42.14:0,42,829	0/0:23,0:23:60.21:0,60,1197	0/0:28,0:28:78.27:0,78,1552	1/1:1,5:6:16.58:151,17,0	0/0:19,0:19:57.15:0,57,1101	0/0:19,0:19:57.20:0,57,1127	0/0:20,0:20:57.20:0,57,1158	0/0:17,0:17:51.07:0,51,918	0/0:22,0:22:63.19:0,63,1240	0/0:14,0:14:42.10:0,42,800	0/0:16,0:16:48.12:0,48,923	0/0:16,0:16:48.12:0,48,910	0/0:32,0:32:93.32:0,93,1844	0/0:34,0:33:95.86:0,96,1819	1/1:1,2:2:3.01:31,3,0	1/1:1,11:12:35.89:284,36,0	1/1:0,6:7:6.91:47,7,0	0/0:17,0:17:51.18:0,51,1036	0/0:9,0:9:24.08:0,24,462	0/0:25,0:25:69.24:0,69,1363	0/0:12,0:12:33.11:0,33,671	0/0:18,0:18:51.18:0,51,1036	1/1:1,13:15:41.97:379,42,0	0/0:9,0:9:24.08:0,24,461
chr10	104641651	.	C	CTGTGT	2899.02	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.761;DP=508;FS=5.934;HRun=0;HaplotypeScore=124.6247;InbreedingCoeff=0.9544;MQ=56.92;MQ0=1;MQRankSum=-8.665;QD=51.77;ReadPosRankSum=0.369;VQSLOD=3.7372;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,99,2230	0/0:5,0:5:15.05:0,15,329	0/0:20,0:17:36.18:0,36,676	0/0:29,0:26:66.56:0,67,1384	0/0:14,0:14:42.11:0,42,885	0/0:23,0:23:56.86:0,57,1327	0/0:29,0:29:78.22:0,78,1680	1/1:8,6:14:39.08:942,39,0	0/0:19,0:19:54.19:0,54,1252	0/0:18,0:18:51.18:0,51,1171	0/0:22,0:22:58.01:0,58,1368	0/0:16,0:16:42.14:0,42,979	0/0:22,0:22:60.16:0,60,1394	0/0:12,0:12:36.12:0,36,838	0/0:16,0:16:44.73:0,45,999	0/0:16,0:16:39.09:0,39,907	0/0:31,0:31:90.27:0,90,2014	0/0:33,0:32:90.31:0,90,2036	1/1:2,1:2:6.02:163,6,0	1/1:3,11:14:33.11:817,33,0	1/1:4,6:10:9.01:221,9,0	0/0:19,0:19:54.19:0,54,1233	0/0:8,0:8:21.07:0,21,489	0/0:24,0:24:66.21:0,66,1484	0/0:14,0:14:36.12:0,36,814	0/0:17,0:17:51.18:0,51,1172	1/1:2,13:15:36.12:921,36,0	0/0:7,0:7:18.06:0,18,419
chr10	104641706	.	A	AAGAGGG	1089.22	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=7.441;DP=580;FS=59.750;HRun=0;HaplotypeScore=206.1815;InbreedingCoeff=0.1142;MQ=43.52;MQ0=16;MQRankSum=-5.376;QD=5.07;ReadPosRankSum=-0.163;VQSLOD=0.6271;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:40:29.57:30,0,986	0/0:8,0:6:14.58:0,15,223	0/0:15,0:9:1.63:0,2,241	0/0:15,0:9:20.59:0,21,296	0/0:20,0:20:39.07:0,39,633	0/0:26,0:26:37.08:0,37,826	0/0:27,0:26:30.97:0,31,642	0/1:24,0:16:27.86:214,0,28	0/0:24,0:24:57.50:0,58,907	0/0:18,0:18:30.64:0,31,531	0/1:27,0:26:6.07:6,0,626	0/0:19,0:19:25.25:0,25,652	0/0:27,0:27:61.71:0,62,978	0/1:16,0:16:10.85:11,0,357	0/0:23,0:22:58.50:0,59,752	0/0:29,0:29:42.94:0,43,963	0/0:22,0:21:28.63:0,29,739	0/0:21,0:20:24.57:0,25,546	0/1:31,0:27:7.50:616,0,8	1/1:15,0:15:4.49:164,4,0	0/1:9,0:7:7.86:64,0,8	0/1:25,0:25:2.96:3,0,694	0/1:15,0:14:12.48:12,0,203	0/0:23,0:23:39.97:0,40,551	0/0:22,0:22:33.89:0,34,540	0/0:20,0:19:53.50:0,54,861	1/1:7,5:13:4.15:112,4,0	0/0:6,0:6:7.18:0,7,144
chr10	104641708	.	GA	G	1505.37	PASS	AB=0.553;AC=4;AF=0.071;AN=56;BaseQRankSum=-1.167;DP=572;FS=0.000;HRun=1;HaplotypeScore=144.0862;InbreedingCoeff=0.2377;MQ=43.36;MQ0=16;MQRankSum=0.918;QD=20.07;ReadPosRankSum=0.857;VQSLOD=3.6611;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:97.86:0,98,1286	0/0:8,0:6:18.02:0,18,220	0/0:14,0:9:1.67:0,2,224	0/0:13,1:8:14.94:0,15,195	0/0:20,0:20:44.54:0,45,600	0/1:3,23:26:9.11:614,0,9	0/1:7,20:26:78.53:533,0,79	0/0:24,0:16:44.94:0,45,522	0/0:23,0:23:48.44:0,48,793	0/0:18,0:18:51.14:0,51,662	0/0:26,0:25:54.34:0,54,730	0/0:19,0:19:51.03:0,51,653	0/0:27,0:27:53.94:0,54,894	0/0:16,0:16:44.70:0,45,507	0/0:22,0:21:58.32:0,58,744	0/0:29,0:29:78.19:0,78,1091	0/0:22,0:21:57.09:0,57,755	0/0:18,0:17:48.11:0,48,636	0/0:31,0:27:77.33:0,77,859	0/0:15,0:15:22.49:0,22,254	0/0:9,0:7:8.81:0,9,107	0/0:25,0:25:62.78:0,63,798	0/0:15,0:14:32.67:0,33,378	0/0:23,0:23:45.01:0,45,625	1/1:4,17:22:0.29:458,0,0	0/0:20,0:19:51.96:0,52,691	0/0:13,0:13:21.06:0,21,269	0/0:6,0:6:15.05:0,15,216
chr10	104641910	.	AC	A	2247.85	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.099;DP=627;FS=5.964;HRun=1;HaplotypeScore=67.0279;InbreedingCoeff=0.9963;MQ=78.89;MQ0=0;MQRankSum=0.970;QD=34.06;ReadPosRankSum=1.454;VQSLOD=3.4803;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1768	0/0:8,0:8:24.08:0,24,381	0/0:22,0:22:63.15:0,63,869	0/0:20,0:20:57.14:0,57,841	0/0:14,0:14:42.14:0,42,662	1/1:0,17:17:45.15:629,45,0	1/1:0,29:29:69.23:965,69,0	0/0:27,0:27:72.23:0,72,1093	0/0:24,0:24:69.20:0,69,1068	0/0:20,0:20:57.17:0,57,862	0/0:13,0:13:39.12:0,39,592	0/0:21,0:21:57.19:0,57,910	0/0:23,0:23:66.22:0,66,1045	0/0:16,0:16:45.15:0,45,716	0/0:29,0:29:84.23:0,84,1286	0/0:17,0:17:45.15:0,45,717	0/0:32,0:32:87.27:0,87,1341	0/0:20,0:20:57.15:0,57,882	0/0:31,0:31:90.29:0,90,1408	0/0:14,0:14:42.14:0,42,659	0/0:60,0:60:99:0,172,2617	0/0:23,0:23:66.22:0,66,1047	0/0:11,0:11:33.11:0,33,521	0/0:32,0:32:84.26:0,84,1307	1/1:0,20:20:57.19:797,57,0	0/0:21,0:21:57.18:0,57,888	0/0:19,0:19:57.19:0,57,892	0/0:6,0:6:18.06:0,18,287
chr10	104645097	.	GA	G	1122.81	PASS	AB=0.932;AC=19;AF=0.339;AN=56;BaseQRankSum=8.162;DP=477;FS=2.703;HRun=12;HaplotypeScore=65.1986;InbreedingCoeff=0.3678;MQ=64.96;MQ0=17;MQRankSum=-4.516;QD=4.66;ReadPosRankSum=-0.902;VQSLOD=1.3483;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:35:51.53:0,52,653	0/0:4,0:4:3.01:0,3,30	0/1:39,0:14:0.29:0,0,72	0/1:38,0:19:1.58:2,0,92	0/0:22,2:23:4.62:0,5,403	0/1:8,1:10:5.36:5,0,118	0/0:7,0:7:8.85:0,9,75	1/1:11,11:20:37.82:283,38,0	0/1:10,1:8:8.21:8,0,107	0/1:8,0:8:9.64:10,0,75	0/1:18,2:19:7.39:7,0,296	0/0:9,0:10:17.81:0,18,166	0/0:17,0:16:20.88:0,21,197	0/0:17,0:15:27.04:0,27,267	0/1:10,1:9:2.21:2,0,156	0/0:13,0:12:29.69:0,30,274	0/0:24,0:23:24.82:0,25,407	0/0:14,1:14:12.67:0,13,281	1/1:5,13:16:11.40:271,11,0	1/1:4,17:23:31.22:394,31,0	1/1:1,6:7:17.93:139,18,0	0/0:10,0:9:21.04:0,21,213	0/0:16,0:16:41.95:0,42,409	0/1:8,1:9:7.32:7,0,107	0/0:20,1:21:9.75:0,10,254	0/0:20,0:19:33.91:0,34,326	1/1:3,10:11:20.91:162,21,0	0/1:6,1:8:2.37:2,0,140
chr10	104645136	.	T	TA	3981.29	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-0.204;DP=356;FS=2.700;HRun=0;HaplotypeScore=41.9252;InbreedingCoeff=0.9404;MQ=60.43;MQ0=12;MQRankSum=-3.372;QD=32.90;ReadPosRankSum=-2.625;VQSLOD=2.5143;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.17:0,66,882	1/1:0,1:1:3.01:44,3,0	0/0:8,0:3:6.02:0,6,84	0/0:9,0:5:11.38:0,11,114	0/0:16,0:16:36.88:0,37,573	1/1:1,11:11:33.02:445,33,0	1/1:1,13:13:30.10:437,30,0	1/1:4,19:18:51.13:704,51,0	0/0:9,0:6:18.05:0,18,236	0/0:9,0:9:27.08:0,27,347	0/0:19,0:19:54.18:0,54,751	0/0:9,0:8:24.08:0,24,333	0/0:8,0:8:24.07:0,24,319	0/0:13,0:12:33.11:0,33,460	0/0:7,0:7:21.07:0,21,293	0/0:10,0:10:30.09:0,30,403	0/0:22,0:22:60.19:0,60,812	0/0:13,0:12:33.02:0,33,418	1/1:6,15:17:51.07:654,51,0	1/1:5,16:21:62.74:693,63,0	1/1:1,5:6:14.95:172,15,0	0/0:7,0:7:21.05:0,21,259	0/0:18,0:18:51.09:0,51,646	0/0:10,0:9:18.05:0,18,235	1/1:0,15:15:42.14:614,42,0	0/0:16,0:15:45.11:0,45,586	1/1:1,7:6:15.05:218,15,0	0/0:8,0:8:23.99:0,24,304
chr10	104645309	.	GTT	G	914.97	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=5.096;DP=361;FS=1.509;HRun=7;HaplotypeScore=63.8374;InbreedingCoeff=0.8142;MQ=62.41;MQ0=5;MQRankSum=-2.239;QD=15.78;ReadPosRankSum=-1.278;VQSLOD=0.3737;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.16:0,60,979	0/0:9,0:8:18.01:0,18,257	0/0:16,0:10:10.97:0,11,266	0/1:7,0:5:12.94:13,0,56	0/0:26,0:26:69.20:0,69,1100	0/0:9,0:9:27.09:0,27,461	0/0:11,0:11:30.10:0,30,524	1/1:2,7:8:18.05:228,18,0	0/0:16,0:15:39.09:0,39,631	0/0:16,0:16:42.14:0,42,720	0/0:9,0:9:27.09:0,27,472	0/0:9,0:9:24.08:0,24,406	0/0:8,0:8:24.08:0,24,419	0/0:14,0:14:42.14:0,42,718	0/0:7,0:7:21.03:0,21,332	0/0:10,0:9:27.09:0,27,469	0/0:22,0:20:38.90:0,39,806	0/0:15,0:14:30.08:0,30,485	1/1:5,4:8:12.04:153,12,0	1/1:2,16:19:42.13:533,42,0	1/1:3,2:5:6.02:76,6,0	0/0:15,0:15:36.59:0,37,628	0/0:15,0:15:42.06:0,42,663	0/0:11,0:10:24.08:0,24,391	0/0:14,0:13:36.11:0,36,603	0/0:19,0:19:54.18:0,54,905	1/1:1,5:5:6.02:76,6,0	0/0:6,0:6:12.04:0,12,210
chr10	104646477	.	G	GA	583.81	PASS	AB=1.000;AC=9;AF=0.188;AN=48;BaseQRankSum=7.240;DP=408;FS=0.000;HRun=10;HaplotypeScore=70.0866;InbreedingCoeff=0.6917;MQ=65.24;MQ0=10;MQRankSum=-2.838;QD=7.21;ReadPosRankSum=-1.973;VQSLOD=1.3221;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:41.47:0,41,465	0/0:14,0:14:35.30:0,35,244	0/0:37,1:12:1.92:0,2,46	0/1:38,0:16:15.95:16,0,79	0/0:18,0:18:22.95:0,23,202	1/1:12,4:16:29.56:249,30,0	1/1:12,0:12:14.90:129,15,0	1/1:1,0:1:2.88:15,3,0	0/0:13,0:13:37.33:0,37,279	0/0:14,0:15:38.83:0,39,306	0/0:13,0:12:31.99:0,32,248	0/0:13,0:13:27.20:0,27,201	0/0:11,0:11:14.42:0,14,120	0/0:4,0:4:11.96:0,12,94	0/0:14,0:14:32.92:0,33,266	0/0:10,0:10:20.92:0,21,166	0/0:38,0:38:99:0,104,841	0/0:32,0:31:80.77:0,81,648	./.	./.	./.	0/0:7,1:8:11.20:0,11,132	0/0:14,0:14:35.95:0,36,295	0/0:8,0:8:22.79:0,23,177	1/1:9,4:14:32.47:321,32,0	0/0:15,0:15:0.95:0,1,210	./.	0/0:15,0:15:40.47:0,40,319
chr10	104646714	.	GGTGTGT	G	1117.79	PASS	AB=0.950;AC=17;AF=0.327;AN=52;BaseQRankSum=7.854;DP=515;FS=9.239;HRun=0;HaplotypeScore=118.0789;InbreedingCoeff=0.6733;MQ=53.21;MQ0=12;MQRankSum=-5.831;QD=6.14;ReadPosRankSum=-1.570;VQSLOD=1.5816;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:35:27.07:0,27,564	1/1:4,0:6:6.02:84,6,0	./.	./.	0/0:12,0:14:18.06:0,18,371	1/1:12,2:15:9.03:163,9,0	0/1:25,2:27:58.14:172,0,58	0/1:33,0:31:0:1,0,0	0/0:11,0:13:15.52:0,16,372	0/0:25,0:25:35.04:0,35,539	0/0:11,0:11:21.07:0,21,567	0/0:13,0:14:21.07:0,21,451	0/0:9,0:9:18.06:0,18,385	0/0:11,0:11:12.03:0,12,207	0/0:18,0:20:20.19:0,20,501	0/0:18,0:21:21.35:0,21,555	0/0:25,0:28:48.14:0,48,1044	0/0:24,0:24:28.30:0,28,724	1/1:17,0:18:2.98:42,3,0	1/1:14,0:14:11.73:98,12,0	1/1:18,0:18:2.75:42,3,0	0/0:17,0:17:15.51:0,16,305	0/0:10,0:10:18.06:0,18,461	0/0:27,0:29:30.04:0,30,678	1/1:13,9:21:15.05:304,15,0	0/0:21,0:21:24:0,24,468	1/1:5,1:13:24.08:346,24,0	0/1:10,1:10:39.70:40,0,418
chr10	104647239	.	G	GTA	2910.75	PASS	AC=16;AF=0.308;AN=52;BaseQRankSum=-4.372;DP=376;FS=3.370;HRun=0;HaplotypeScore=37.9625;InbreedingCoeff=0.9402;MQ=51.28;MQ0=15;MQRankSum=-9.806;QD=26.70;ReadPosRankSum=-0.425;VQSLOD=3.5170;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:28:75.25:0,75,1073	1/1:0,9:9:21.07:382,21,0	0/0:3,0:1:3.01:0,3,41	./.	0/0:19,0:19:51.16:0,51,712	1/1:4,20:20:30.10:548,30,0	1/1:0,5:5:6.02:109,6,0	1/1:7,8:16:33.04:534,33,0	0/0:8,0:8:24.07:0,24,325	0/0:21,0:19:51.17:0,51,729	0/0:18,0:18:42.13:0,42,583	0/0:7,0:7:21.07:0,21,301	0/0:11,0:11:30.10:0,30,428	0/0:16,0:16:42.11:0,42,565	0/0:9,0:9:27.09:0,27,386	0/0:8,0:8:24.08:0,24,343	0/0:26,0:23:66.20:0,66,925	0/0:20,0:20:45.13:0,45,623	1/1:6,11:11:33.11:604,33,0	1/1:1,7:9:21.07:380,21,0	./.	0/0:7,0:7:18.06:0,18,258	0/0:7,0:7:21.07:0,21,300	0/0:7,0:7:21.07:0,21,301	1/1:1,15:14:15.05:274,15,0	0/0:27,0:27:72.23:0,72,1013	1/1:3,9:10:15.05:274,15,0	0/0:11,0:10:24.04:0,24,305
chr10	104648790	.	C	CCT	6330.63	PASS	AB=0.765;AC=15;AF=0.268;AN=56;BaseQRankSum=-13.937;DP=738;FS=3.711;HRun=0;HaplotypeScore=105.3380;InbreedingCoeff=0.9075;MQ=82.31;MQ0=5;MQRankSum=0.122;QD=30.58;ReadPosRankSum=0.517;VQSLOD=6.6452;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:43:99:0,105,1274	0/0:7,0:7:18.06:0,18,225	0/0:63,0:48:24.11:0,24,711	0/0:70,0:52:71.43:0,71,985	0/0:13,0:13:33.07:0,33,374	1/1:4,16:20:42.14:689,42,0	1/1:4,28:32:69.24:1129,69,0	1/1:13,24:37:72.20:1090,72,0	0/0:29,0:29:66.03:0,66,789	0/0:24,0:23:66.20:0,66,814	0/0:15,0:16:32.91:0,33,363	0/0:35,0:35:93.28:0,93,1140	0/0:13,0:14:32.94:0,33,388	0/0:15,0:17:47.80:0,48,538	0/0:29,0:29:72.22:0,72,886	0/0:17,0:17:42.13:0,42,525	0/0:32,0:32:66.18:0,66,799	0/0:21,0:21:48.10:0,48,566	0/1:9,4:13:22.49:182,0,22	1/1:3,24:27:66.22:1077,66,0	1/1:10,21:31:51.17:842,51,0	0/0:14,0:14:30.08:0,30,361	0/0:14,0:14:36.10:0,36,437	0/0:19,0:19:42.13:0,42,524	1/1:3,20:23:41.24:692,41,0	0/0:27,0:27:60.18:0,60,740	1/1:6,18:23:39.13:630,39,0	0/0:25,0:27:59.85:0,60,703
chr10	104650824	.	AG	A	1706.49	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.303;DP=652;FS=11.502;HRun=10;HaplotypeScore=73.8412;InbreedingCoeff=0.9843;MQ=69.93;MQ0=1;MQRankSum=0.927;QD=13.44;ReadPosRankSum=-0.245;VQSLOD=2.2950;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,103,1012	0/0:11,0:11:15.01:0,15,148	0/0:37,0:27:27.91:0,28,349	0/0:14,0:11:16.57:0,17,161	0/0:18,0:18:30.07:0,30,316	0/0:28,0:27:42.03:0,42,416	0/0:27,0:28:39.69:0,40,594	1/1:9,12:22:22.27:230,22,0	0/0:26,0:26:38.07:0,38,546	0/0:11,0:11:12.02:0,12,112	0/0:11,0:11:23.91:0,24,225	0/0:23,0:23:48.11:0,48,511	0/0:18,0:18:39.07:0,39,405	0/0:20,0:20:31.17:0,31,380	0/0:24,0:24:53.84:0,54,515	0/0:24,1:25:46.18:0,46,707	0/0:25,0:25:40.08:0,40,607	0/0:23,0:23:48.49:0,48,485	1/1:10,7:17:32.96:279,33,0	1/1:8,18:26:46.34:349,46,0	1/1:20,15:35:65.58:533,66,0	0/0:14,0:14:24.06:0,24,264	0/0:22,0:21:41:0,41,359	0/0:20,0:20:48.13:0,48,527	0/0:25,0:29:53.91:0,54,535	0/0:32,0:32:56.26:0,56,539	1/1:5,22:27:54.86:490,55,0	0/0:21,0:21:36.03:0,36,360
chr10	104652053	.	TACACACACACAC	T	514.39	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=2.117;DP=549;FS=1.420;HRun=0;HaplotypeScore=173.2777;InbreedingCoeff=0.7542;MQ=63.25;MQ0=12;MQRankSum=-3.570;QD=6.95;ReadPosRankSum=0.731;VQSLOD=2.8739;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:32:42.14:0,42,2068	0/0:5,0:5:12.04:0,12,565	0/0:32,0:23:2.04:0,2,6	./.	0/0:11,0:11:15.03:0,15,642	0/0:10,0:10:12.04:0,12,455	0/0:13,0:18:11.07:0,11,419	1/1:21,0:19:5.98:94,6,0	0/0:22,0:24:54.19:0,54,2516	0/0:17,0:17:33.11:0,33,1471	0/0:18,0:18:32.51:0,33,1688	0/0:20,0:21:36.12:0,36,1641	0/0:13,0:13:27.09:0,27,1248	0/0:16,0:16:24.02:0,24,1058	0/0:21,0:21:27.09:0,27,1229	0/0:19,0:24:42.14:0,42,2135	0/0:32,0:33:66.23:0,66,3109	0/0:11,0:12:21.54:0,22,877	1/1:18,0:15:5.14:78,5,0	1/1:8,8:16:12.04:369,12,0	0/0:19,12:31:0.47:0,0,1	0/0:17,0:17:29.82:0,30,1478	0/0:12,0:11:15.92:0,16,728	0/0:42,0:42:57.14:0,57,2669	0/0:12,0:16:24.07:0,24,943	0/0:12,0:12:9.03:0,9,358	1/1:14,5:19:3:103,3,0	0/0:6,0:8:24.08:0,24,1202
chr10	104653357	.	A	AAG	618.39	PASS	AB=0.966;AC=22;AF=0.407;AN=54;BaseQRankSum=0.060;DP=610;FS=0.000;HRun=0;HaplotypeScore=102.4222;InbreedingCoeff=0.1557;MQ=50.22;MQ0=25;MQRankSum=-1.050;QD=1.79;ReadPosRankSum=-2.046;VQSLOD=1.6755;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:39:22.81:23,0,53	0/1:9,0:10:3.29:6,0,3	0/1:24,0:3:0:0,0,0	./.	0/0:21,0:23:16.20:0,16,106	0/0:13,0:16:8.67:0,9,61	0/0:18,0:17:7.68:0,8,120	1/1:27,0:26:1.25:3,1,0	0/0:27,0:27:17.99:0,18,183	0/1:31,0:31:26.46:103,0,26	0/0:15,0:14:7.23:0,7,42	0/0:17,0:17:12.03:0,12,125	0/1:11,4:15:0.16:39,0,0	0/1:19,1:20:21.22:61,0,21	0/0:24,0:24:23.54:0,24,228	0/0:17,0:19:11.86:0,12,110	0/0:33,0:30:17.14:0,17,150	0/0:21,0:21:5.07:0,5,48	1/1:24,0:24:1.10:58,1,0	1/1:11,1:12:4.83:49,5,0	0/1:27,0:27:15.64:103,0,16	0/1:16,0:15:1.21:1,0,58	0/1:16,0:15:9.62:10,0,26	1/1:20,1:21:6:68,6,0	0/1:19,1:20:59.50:77,0,60	1/1:31,0:31:5.37:159,5,0	0/0:16,0:15:2.91:0,3,25	1/1:9,1:9:2.22:7,2,0
chr10	104654594	.	G	GGTAT	8582.66	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-12.770;DP=647;FS=15.560;HRun=0;HaplotypeScore=99.8191;InbreedingCoeff=0.9844;MQ=85.82;MQ0=0;MQRankSum=-7.239;QD=69.21;ReadPosRankSum=-2.573;VQSLOD=5.4819;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:93.30:0,93,1693	0/0:7,0:7:18.06:0,18,336	0/0:26,0:25:33.32:0,33,1005	0/0:22,0:22:44.77:0,45,834	0/0:31,0:31:93.32:0,93,1735	0/0:29,0:29:81.28:0,81,1503	0/0:16,0:16:45.14:0,45,801	1/1:7,28:37:99:2575,105,0	0/0:26,0:26:75.24:0,75,1361	0/0:30,0:30:75.25:0,75,1363	0/0:21,0:21:63.20:0,63,1145	0/0:20,0:20:60.21:0,60,1119	0/0:20,0:20:54.19:0,54,1008	0/0:15,0:15:39.13:0,39,727	0/0:27,0:27:75.26:0,75,1400	0/0:22,0:22:63.18:0,63,1083	0/0:19,0:19:54.19:0,54,1007	0/0:22,0:22:66.18:0,66,1196	1/1:1,14:16:45.14:1142,45,0	1/1:4,26:31:78.27:2071,78,0	1/1:1,5:6:9.03:240,9,0	0/0:17,0:17:51.17:0,51,952	0/0:22,0:22:60.21:0,60,1120	0/0:28,0:28:84.27:0,84,1522	0/0:17,0:17:51.17:0,51,937	0/0:28,0:28:81.28:0,81,1498	1/1:1,32:34:96.33:2555,96,0	0/0:22,0:22:63.22:0,63,1176
chr10	104655640	.	CCT	C	305.10	PASS	AB=1.000;AC=7;AF=0.135;AN=52;BaseQRankSum=2.048;DP=165;FS=1.623;HRun=0;HaplotypeScore=33.2617;InbreedingCoeff=0.5340;MQ=74.62;MQ0=4;MQRankSum=-1.008;QD=15.25;ReadPosRankSum=-0.299;VQSLOD=3.0917;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:20.96:0,21,286	./.	0/0:25,0:12:21.11:0,21,223	0/0:22,0:8:21.22:0,21,236	0/0:4,0:4:6.02:0,6,105	1/1:4,1:5:11.92:128,12,0	1/1:1,6:7:14.22:157,14,0	0/0:6,0:6:15.03:0,15,174	0/0:4,0:4:8.99:0,9,128	0/0:3,0:3:9.03:0,9,156	0/0:7,0:7:15.04:0,15,238	0/0:5,0:5:8.02:0,8,102	0/0:4,0:4:5.73:0,6,71	0/0:4,0:3:3:0,3,53	0/0:2,0:2:6.02:0,6,105	0/1:3,0:2:10.46:10,0,19	0/0:2,0:2:6:0,6,76	0/0:4,0:4:12.01:0,12,155	0/0:8,0:8:14.09:0,14,283	0/0:4,0:4:12.02:0,12,157	0/0:7,0:7:15.02:0,15,208	0/0:5,0:5:14.79:0,15,223	0/0:4,0:4:6.48:0,6,79	0/0:8,0:8:18.03:0,18,244	1/1:5,0:5:14.98:144,15,0	0/0:4,0:4:1.45:0,1,83	0/0:3,0:3:9.02:0,9,128	./.
chr10	104655648	.	CTGTT	C	60.51	PASS	AB=0.851;AC=5;AF=0.096;AN=52;BaseQRankSum=4.613;DP=231;FS=16.823;HRun=0;HaplotypeScore=52.1848;InbreedingCoeff=-0.1441;MQ=82.72;MQ0=6;MQRankSum=-2.181;QD=2.09;ReadPosRankSum=0.720;VQSLOD=0.1278;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:29.97:0,30,637	./.	0/0:41,0:21:47.95:0,48,746	0/0:36,0:19:17.28:0,17,601	0/0:7,0:7:15.01:0,15,323	0/1:4,1:4:21.85:22,0,211	0/1:9,1:10:28.73:29,0,333	0/0:11,0:11:27.09:0,27,695	0/0:4,1:5:12.04:0,12,282	0/0:5,0:5:15.05:0,15,334	0/0:10,0:10:27.08:0,27,685	0/0:4,1:5:8.95:0,9,251	0/0:3,1:4:3.01:0,3,84	0/0:5,0:4:6.02:0,6,118	0/0:2,0:2:6.02:0,6,166	0/1:3,1:3:12.63:13,0,128	0/0:4,0:4:9.03:0,9,218	0/0:5,0:5:15.04:0,15,272	0/0:10,0:10:24.08:0,24,638	0/0:7,0:7:21.07:0,21,479	0/0:9,0:9:21.04:0,21,468	0/0:4,0:5:4.21:0,4,274	0/0:3,0:4:9.01:0,9,243	0/0:10,0:10:21.02:0,21,553	0/1:5,0:5:12.97:13,0,290	0/1:3,2:5:95.83:96,0,237	0/0:3,0:3:9.03:0,9,250	./.
chr10	104657790	.	AAG	A	3878.33	PASS	AB=0.784;AC=38;AF=0.731;AN=52;BaseQRankSum=-0.022;DP=611;FS=7.659;HRun=0;HaplotypeScore=83.5567;InbreedingCoeff=0.6741;MQ=63.59;MQ0=9;MQRankSum=0.955;QD=9.17;ReadPosRankSum=4.287;VQSLOD=2.5203;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,9:29:12.33:113,12,0	0/0:8,0:8:5.99:0,6,48	./.	./.	1/1:16,7:23:17.88:178,18,0	0/1:11,4:14:54.62:83,0,55	1/1:15,9:24:18.05:196,18,0	0/0:22,0:22:14.79:0,15,161	1/1:9,10:19:21.06:229,21,0	1/1:16,9:26:15.70:229,16,0	1/1:15,4:19:2.06:59,2,0	1/1:6,9:15:15.04:164,15,0	1/1:9,5:16:17.71:159,18,0	1/1:9,7:16:17.88:177,18,0	1/1:9,11:22:29.75:290,30,0	0/1:15,6:21:24.65:150,0,25	1/1:11,17:28:38.23:424,38,0	1/1:13,13:26:28.03:324,28,0	0/0:20,0:26:24.42:0,24,247	0/0:13,0:13:9.01:0,9,96	0/0:12,0:12:9:0,9,77	1/1:7,9:16:24.06:262,24,0	1/1:10,2:12:8.81:78,9,0	1/1:20,13:34:35.93:374,36,0	1/1:14,6:20:15.04:164,15,0	1/1:19,6:26:23.58:182,24,0	0/0:17,0:27:18.02:0,18,187	1/1:14,0:14:5.96:44,6,0
chr10	104661722	.	CCCACACACACA	C	164.56	PASS	AB=0.571;AC=5;AF=0.089;AN=56;BaseQRankSum=1.618;DP=412;FS=3.199;HRun=0;HaplotypeScore=123.7818;InbreedingCoeff=0.6167;MQ=57.20;MQ0=26;MQRankSum=-1.840;QD=3.58;ReadPosRankSum=-0.393;VQSLOD=2.2570;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:63.38:0,63,1881	0/0:1,0:4:6.01:0,6,91	0/0:12,0:9:27.08:0,27,692	0/0:18,0:11:33.11:0,33,1376	0/0:11,0:11:24.06:0,24,680	1/1:8,1:9:5.97:48,6,0	1/1:6,14:20:6.96:216,7,0	0/0:5,0:5:9.43:0,9,126	0/0:21,0:21:63.15:0,63,2064	0/0:14,0:11:24.03:0,24,727	0/0:8,0:8:12.02:0,12,220	0/0:19,0:19:45.11:0,45,1387	0/0:17,0:15:16.21:0,16,1105	0/0:16,0:15:42.08:0,42,1227	0/0:24,0:23:63.20:0,63,2191	0/0:16,0:16:48.13:0,48,1491	0/0:14,0:13:39.06:0,39,1045	0/0:17,0:16:33.07:0,33,1110	0/0:8,0:7:4.72:0,5,252	0/0:6,0:4:3.44:0,3,21	0/0:19,0:17:6.94:0,7,104	0/0:4,0:4:8.99:0,9,196	0/0:14,0:14:25.83:0,26,608	0/0:29,0:28:64.54:0,65,1894	0/1:4,11:13:0:0,0,0	0/0:15,0:14:10.23:0,10,1032	0/0:9,0:8:18.03:0,18,291	0/0:12,0:11:27.07:0,27,776
chr10	104661723	.	CCA	C	1444.81	PASS	AB=0.982;AC=27;AF=0.519;AN=52;BaseQRankSum=-5.397;DP=415;FS=17.771;HRun=0;HaplotypeScore=60.7710;InbreedingCoeff=-0.4360;MQ=56.96;MQ0=26;MQRankSum=1.322;QD=4.04;ReadPosRankSum=3.941;VQSLOD=0.5589;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:29:83.56:122,0,84	1/1:4,0:4:5.88:37,6,0	1/1:12,0:9:1.97:6,2,0	0/0:18,0:11:16.98:0,17,180	0/1:11,0:11:15.43:15,0,71	1/1:8,0:8:2.90:16,3,0	1/1:19,0:19:8.32:44,8,0	./.	0/1:20,1:21:80.09:181,0,80	0/1:11,3:11:42.14:43,0,42	0/0:8,0:8:0:0,0,0	0/1:19,1:20:78.27:115,0,78	0/1:16,0:14:46.94:47,0,61	0/1:16,0:15:32.86:89,0,33	0/1:26,1:26:59.39:239,0,59	0/1:17,0:17:67.08:130,0,67	0/1:14,0:13:38.90:84,0,39	0/1:18,0:17:63.23:63,0,77	0/1:9,0:8:10.81:20,0,11	0/0:6,0:4:0:0,0,0	0/1:19,0:17:0:0,0,0	0/0:4,0:4:2.80:0,3,13	0/1:14,0:14:27.59:34,0,28	0/1:29,0:28:23.79:177,0,24	./.	0/1:16,0:15:58.70:69,0,59	1/1:9,0:8:2.94:18,3,0	0/1:12,0:11:34.52:35,0,35
chr10	104661724	.	CACA	C	328.93	PASS	AB=0.923;AC=19;AF=0.339;AN=56;BaseQRankSum=1.318;DP=400;FS=7.469;HRun=0;HaplotypeScore=70.2590;InbreedingCoeff=0.4488;MQ=57.01;MQ0=26;MQRankSum=-0.175;QD=2.19;ReadPosRankSum=-0.703;VQSLOD=-0.0077;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:27:13.01:13,0,434	1/1:5,0:4:5.98:47,6,0	0/0:12,0:9:26.73:0,27,233	0/0:18,0:11:32.98:0,33,491	0/0:11,0:11:6.36:0,6,234	1/1:8,0:8:3.88:27,4,0	1/1:20,0:19:9.53:62,10,0	1/1:1,0:4:5.97:54,6,0	0/0:22,0:22:27.55:0,28,487	0/0:12,0:9:15.17:0,15,171	0/0:5,0:5:5.95:0,6,46	0/0:19,0:19:39.34:0,39,446	0/0:17,0:15:11.09:0,11,318	0/0:14,0:13:29.20:0,29,280	0/0:27,0:26:6.97:0,7,529	0/0:18,0:18:39.75:0,40,408	0/0:15,0:14:10.71:0,11,302	0/0:16,0:15:26.75:0,27,328	0/1:3,0:7:28.31:120,0,28	1/1:0,5:4:2.76:19,3,0	1/1:5,11:15:0.94:2,1,0	0/0:4,0:4:5.22:0,5,60	0/1:12,0:12:6.61:7,0,148	0/0:29,0:28:9.12:0,9,422	0/1:15,0:12:0:0,0,0	0/1:17,0:16:14.26:14,0,286	1/1:2,3:8:11.92:127,12,0	0/0:11,0:10:23.79:0,24,238
chr10	104662562	.	T	TC	1743.88	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.875;DP=607;FS=4.217;HRun=6;HaplotypeScore=61.1362;InbreedingCoeff=0.9915;MQ=86.53;MQ0=0;MQRankSum=-0.834;QD=30.59;ReadPosRankSum=-0.741;VQSLOD=4.0360;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,135,1369	0/0:7,0:7:21.05:0,21,214	0/0:17,0:17:39.03:0,39,372	0/0:24,0:24:18.56:0,19,326	0/0:7,0:7:18.04:0,18,181	1/1:1,24:25:60.19:755,60,0	1/1:0,17:17:48.15:604,48,0	0/0:23,0:23:48.09:0,48,481	0/0:32,0:32:81.17:0,81,826	0/0:25,0:25:66.12:0,66,663	0/0:11,0:11:30.04:0,30,292	0/0:31,0:31:87.17:0,87,879	0/0:29,0:29:87.18:0,87,880	0/0:25,0:25:69.13:0,69,696	0/0:17,0:17:45.10:0,45,459	0/0:19,0:19:57.13:0,57,582	0/0:27,0:27:75.17:0,75,765	0/0:30,0:30:84.13:0,84,838	0/0:15,0:15:36.07:0,36,367	0/0:12,0:12:30.05:0,30,299	0/0:50,0:50:99:0,135,1367	0/0:14,0:14:36.08:0,36,367	0/0:9,0:9:24.04:0,24,240	0/0:27,0:27:66.11:0,66,664	1/1:0,15:15:42.13:528,42,0	0/0:25,0:25:63.13:0,63,637	0/0:16,0:16:48.11:0,48,489	0/0:9,0:9:27.06:0,27,275
chr10	104663603	.	AAAAT	A	236.55	PASS	AB=0.890;AC=10;AF=0.263;AN=38;BaseQRankSum=3.818;DP=151;FS=5.148;HRun=0;HaplotypeScore=30.4875;InbreedingCoeff=0.3019;MQ=69.06;MQ0=2;MQRankSum=1.493;QD=6.96;ReadPosRankSum=1.046;VQSLOD=0.9373;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,3:7:9.03:139,9,0	0/0:2,0:2:3.01:0,3,70	./.	./.	./.	1/1:5,0:5:6.02:92,6,0	1/1:2,0:2:3:28,3,0	0/0:30,0:29:12:0,12,175	0/0:2,0:2:6.02:0,6,138	0/0:5,0:5:9.03:0,9,202	./.	./.	0/0:3,0:3:9.03:0,9,208	0/0:2,0:2:3.01:0,3,68	./.	./.	0/0:12,0:12:21.07:0,21,489	0/0:25,1:26:7.85:0,8,1123	0/0:3,0:5:6.02:0,6,105	0/0:2,0:3:3.01:0,3,52	./.	./.	0/0:3,0:3:6.02:0,6,140	0/0:1,0:1:3.01:0,3,70	1/1:2,0:2:3.01:46,3,0	0/1:5,1:6:37.30:37,0,129	0/0:2,0:5:3.01:0,3,53	0/1:11,1:11:16.33:16,0,390
chr10	104666127	.	CGTGT	C	2633.05	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.430;DP=996;FS=0.523;HRun=0;HaplotypeScore=171.8379;InbreedingCoeff=0.9996;MQ=66.19;MQ0=4;MQRankSum=-0.901;QD=31.35;ReadPosRankSum=2.777;VQSLOD=3.3906;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:66:99:0,168,3964	0/0:13,0:13:36.12:0,36,920	0/0:51,0:35:74.77:0,75,1308	0/0:61,0:44:93.42:0,93,1850	0/0:26,0:26:72.25:0,72,1857	1/1:0,20:20:42.14:747,42,0	1/1:6,38:44:83.99:1493,84,0	0/0:40,0:40:99:0,102,2156	0/0:27,0:27:72.23:0,72,1756	0/0:24,0:24:69.24:0,69,1747	0/0:13,0:13:33.11:0,33,813	0/0:39,0:39:99:0,111,2725	0/0:48,0:48:99:0,129,3292	0/0:38,0:38:99:0,108,2618	0/0:28,0:28:84.29:0,84,2109	0/0:29,0:29:81.25:0,81,1945	0/0:47,0:47:99:0,129,3169	0/0:27,0:27:72.25:0,72,1790	0/0:32,0:32:84.28:0,84,1972	0/0:19,0:19:51.16:0,51,1205	0/0:97,0:102:99:0,264,6286	0/0:29,0:29:81.28:0,81,2030	0/0:20,0:21:53.96:0,54,1276	0/0:59,0:59:99:0,160,3957	1/1:1,19:20:31.14:536,31,0	0/0:37,0:37:99:0,99,2449	0/0:21,0:22:59.95:0,60,1390	0/0:11,0:13:32.90:0,33,753
chr10	104667195	.	CAG	C	2948.29	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.855;DP=789;FS=5.950;HRun=0;HaplotypeScore=91.1127;InbreedingCoeff=0.9998;MQ=84.36;MQ0=1;MQRankSum=-3.757;QD=34.28;ReadPosRankSum=1.732;VQSLOD=5.8781;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,151,2760	0/0:16,0:16:48.16:0,48,889	0/0:31,0:31:81.20:0,81,1441	0/0:31,0:31:86.87:0,87,1477	0/0:18,0:18:51.17:0,51,945	1/1:0,26:26:63.21:927,63,0	1/1:2,27:29:72.24:1060,72,0	0/0:28,0:28:78.25:0,78,1437	0/0:29,0:29:87.28:0,87,1597	0/0:35,0:35:99:0,99,1820	0/0:18,0:18:54.18:0,54,982	0/0:35,0:35:99:0,102,1870	0/0:24,0:24:72.25:0,72,1321	0/0:24,0:24:69.24:0,69,1280	0/0:36,0:36:99:0,105,1897	0/0:28,0:28:84.29:0,84,1546	0/0:36,0:36:99:0,102,1875	0/0:19,0:19:57.17:0,57,1033	0/0:28,0:28:84.27:0,84,1541	0/0:26,0:26:75.26:0,75,1404	0/0:37,0:37:99:0,108,1975	0/0:32,0:32:90.30:0,90,1609	0/0:17,0:17:51.16:0,51,904	0/0:37,0:37:99:0,111,2043	1/1:0,31:30:75.25:1104,75,0	0/0:21,0:21:60.20:0,60,1095	0/0:34,0:34:99:0,99,1784	0/0:10,0:10:30.10:0,30,535
chr10	104667355	.	TG	T	2311.79	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.509;DP=654;FS=0.471;HRun=3;HaplotypeScore=61.8068;InbreedingCoeff=0.9976;MQ=82.12;MQ0=0;MQRankSum=-1.811;QD=33.03;ReadPosRankSum=0.385;VQSLOD=3.7324;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1727	0/0:11,0:11:30.06:0,30,409	0/0:24,0:24:66.22:0,66,925	0/0:13,0:13:21.73:0,22,466	0/0:26,0:26:75.23:0,75,1057	1/1:0,22:22:60.19:744,60,0	1/1:1,31:32:93.29:1153,93,0	0/0:33,0:33:81.23:0,81,1113	0/0:21,0:21:63.21:0,63,906	0/0:26,0:26:75.25:0,75,1078	0/0:25,0:25:69.23:0,69,989	0/0:28,0:28:84.28:0,84,1203	0/0:25,0:25:75.25:0,75,1079	0/0:25,0:25:75.24:0,75,1061	0/0:27,0:27:75.25:0,75,1080	0/0:20,0:20:57.19:0,57,820	0/0:25,0:25:75.25:0,75,1078	0/0:21,0:21:63.17:0,63,883	0/0:11,0:11:30.08:0,30,399	0/0:18,0:18:51.16:0,51,716	0/0:46,0:46:99:0,138,1969	0/0:13,0:13:36.12:0,36,517	0/0:19,0:19:54.17:0,54,758	0/0:29,0:29:87.29:0,87,1250	1/1:0,16:16:45.14:558,45,0	0/0:20,0:20:60.20:0,60,856	0/0:29,0:29:84.28:0,84,1204	0/0:8,0:8:24.08:0,24,346
chr10	104667931	.	A	AAAAG	867.76	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.225;DP=562;FS=5.675;HRun=0;HaplotypeScore=111.3657;InbreedingCoeff=0.9387;MQ=83.99;MQ0=3;MQRankSum=-3.190;QD=20.66;ReadPosRankSum=-0.967;VQSLOD=2.5534;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,105,1294	0/0:9,0:9:22.36:0,22,263	0/0:48,0:31:37.37:0,37,631	0/0:42,0:28:10.29:0,10,364	0/0:20,0:20:27.87:0,28,612	1/1:8,0:9:24:302,24,0	1/1:3,6:13:8.09:224,8,0	0/0:28,0:28:18.12:0,18,386	0/0:11,0:11:25.63:0,26,350	0/0:22,0:22:64.67:0,65,773	0/0:14,0:14:35.88:0,36,404	0/0:14,0:14:41.95:0,42,495	0/0:11,0:11:33.08:0,33,427	0/0:13,0:13:11.80:0,12,95	0/0:17,0:17:38.44:0,38,520	0/0:12,0:12:36.05:0,36,470	0/0:36,0:36:98.48:0,98,1306	0/0:27,0:27:56.78:0,57,835	0/0:15,0:15:19.08:0,19,317	0/0:17,0:17:30.86:0,31,228	0/0:16,0:16:29.42:0,29,253	0/0:15,0:15:35.93:0,36,490	0/0:18,0:18:50.69:0,51,520	0/0:18,0:18:44.82:0,45,585	1/1:6,10:20:27.92:478,28,0	0/0:25,0:25:69.04:0,69,775	0/0:22,0:22:43.92:0,44,348	0/0:10,0:10:26.82:0,27,280
chr10	104668409	.	G	GTGT	3163.58	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.647;DP=589;FS=6.448;HRun=0;HaplotypeScore=88.8822;InbreedingCoeff=0.9953;MQ=83.25;MQ0=0;MQRankSum=-9.546;QD=60.84;ReadPosRankSum=1.136;VQSLOD=5.3453;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,2090	0/0:10,0:10:30.10:0,30,535	0/0:12,0:12:36.12:0,36,632	0/0:25,0:25:65.58:0,66,1053	0/0:16,0:16:45.15:0,45,839	1/1:0,18:19:54.19:1244,54,0	1/1:0,24:26:69.24:1580,69,0	0/0:30,0:30:90.31:0,90,1675	0/0:20,0:20:60.21:0,60,1118	0/0:29,0:29:87.30:0,87,1619	0/0:14,0:14:39.13:0,39,727	0/0:20,0:20:60.21:0,60,1112	0/0:17,0:17:51.17:0,51,926	0/0:20,0:20:60.19:0,60,1085	0/0:19,0:19:57.18:0,57,1015	0/0:6,0:6:18.06:0,18,330	0/0:31,0:31:93.32:0,93,1734	0/0:22,0:22:63.19:0,63,1123	0/0:20,0:20:60.21:0,60,1119	0/0:14,0:14:42.14:0,42,741	0/0:53,0:53:99:0,154,2846	0/0:21,0:21:63.20:0,63,1128	0/0:13,0:13:39.13:0,39,727	0/0:30,0:30:90.31:0,90,1678	1/1:0,7:7:21.07:481,21,0	0/0:15,0:15:45.13:0,45,748	0/0:29,0:29:87.30:0,87,1619	0/0:12,0:12:36.12:0,36,671
chr10	104670657	.	T	TTC	6700.43	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-6.384;DP=532;FS=0.000;HRun=0;HaplotypeScore=90.6649;InbreedingCoeff=0.9769;MQ=57.41;MQ0=11;MQRankSum=-2.800;QD=36.42;ReadPosRankSum=1.611;VQSLOD=7.0899;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1295	1/1:1,4:4:6:102,6,0	0/0:13,0:6:14.99:0,15,138	0/0:10,0:8:23.82:0,24,266	0/0:17,0:17:42.13:0,42,577	1/1:2,24:26:60.20:995,60,0	1/1:0,24:24:54.18:912,54,0	1/1:3,25:29:75.09:1146,75,0	0/0:22,0:22:63.14:0,63,838	0/0:16,0:16:42.13:0,42,564	0/0:20,0:19:48.16:0,48,675	0/0:15,0:15:38.98:0,39,469	0/0:9,0:9:24.05:0,24,304	0/0:16,0:15:39.06:0,39,483	0/0:23,0:23:66.12:0,66,802	0/0:15,0:15:42.01:0,42,471	0/0:26,0:26:75.24:0,75,1049	0/0:11,0:9:26.76:0,27,352	1/1:5,19:24:69.01:944,69,0	1/1:0,13:13:24.06:369,24,0	1/1:2,6:8:15.04:234,15,0	0/0:17,0:17:45.09:0,45,595	0/0:9,0:8:24.05:0,24,291	0/0:29,0:28:74.15:0,74,897	1/1:2,22:23:54.18:893,54,0	0/0:23,0:23:63.04:0,63,814	1/1:3,25:29:68.94:1106,69,0	0/0:21,0:20:59.84:0,60,776
chr10	104672121	.	TCTA	T	444.45	PASS	AB=1.000;AC=25;AF=0.463;AN=54;BaseQRankSum=-2.252;DP=146;FS=13.718;HRun=0;HaplotypeScore=31.5823;InbreedingCoeff=0.3596;MQ=53.49;MQ0=6;MQRankSum=-0.267;QD=5.23;ReadPosRankSum=-3.101;VQSLOD=-0.6818;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:8:4.41:4,0,65	./.	1/1:16,0:4:1.68:6,2,0	0/0:4,0:1:0.89:0,1,2	0/0:4,0:4:9.50:0,9,120	1/1:2,0:2:2.97:20,3,0	1/1:8,0:7:7.24:130,7,0	1/1:0,3:3:9.01:107,9,0	0/0:2,0:2:3.90:0,4,41	0/0:3,0:3:3.01:0,3,48	0/0:5,0:5:8.50:0,8,78	0/0:4,0:4:1.55:0,2,4	0/1:4,0:4:16:31,0,16	0/0:6,0:6:6.76:0,7,92	0/0:5,0:5:5.45:0,5,40	0/1:6,0:6:31.44:31,0,84	1/1:5,0:5:1.64:5,2,0	0/0:9,0:9:19.29:0,19,227	1/1:1,2:2:5.94:43,6,0	1/1:0,2:2:3.01:38,3,0	1/1:8,1:6:8.24:90,8,0	1/1:3,0:3:1.89:7,2,0	0/0:12,0:12:16.64:0,17,217	0/1:11,0:10:0.24:0,0,50	0/1:2,0:2:0:0,0,0	0/0:5,0:5:5.47:0,5,50	1/1:2,0:2:6.02:84,6,0	0/0:2,0:2:3.01:0,3,32
chr10	104674676	.	GAAAGA	G	2786.18	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.487;DP=528;FS=7.813;HRun=0;HaplotypeScore=107.2207;InbreedingCoeff=0.9736;MQ=90.74;MQ0=0;MQRankSum=-10.361;QD=31.66;ReadPosRankSum=-1.644;VQSLOD=2.4321;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.28:0,87,2558	0/0:4,0:4:12.04:0,12,395	0/0:23,0:23:69.23:0,69,1955	0/0:23,0:23:62.12:0,62,1946	0/0:18,0:18:51.15:0,51,1427	0/0:19,0:19:57.20:0,57,1881	0/0:31,0:31:93.32:0,93,2928	1/1:18,1:19:28.12:721,28,0	0/0:18,0:18:54.17:0,54,1611	0/0:18,0:18:54.18:0,54,1638	0/0:6,0:6:15.05:0,15,453	0/0:30,0:30:90.30:0,90,2847	0/0:11,0:11:33.11:0,33,1073	0/0:24,0:24:69.23:0,69,2166	0/0:13,0:13:39.13:0,39,1273	0/0:12,0:12:36.12:0,36,1181	0/0:28,0:28:84.29:0,84,2719	0/0:29,0:29:87.26:0,87,2568	1/1:15,0:15:8.64:360,9,0	1/1:13,0:13:30.10:510,30,0	1/1:22,0:22:27.09:443,27,0	0/0:10,0:10:30.10:0,30,885	0/0:13,0:13:37.66:0,38,1124	0/0:26,0:26:78.27:0,78,2562	0/0:17,0:17:51.18:0,51,1647	0/0:20,0:20:54.16:0,54,1673	1/1:15,4:19:51.17:924,51,0	0/0:17,0:17:51.15:0,51,1582
chr10	104674677	.	AAAGAC	A	4172.16	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.589;DP=519;FS=7.446;HRun=0;HaplotypeScore=101.1402;InbreedingCoeff=0.9886;MQ=90.65;MQ0=0;MQRankSum=-9.485;QD=50.27;ReadPosRankSum=-2.563;VQSLOD=3.0998;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.29:0,84,2411	0/0:4,0:4:12.04:0,12,397	0/0:22,0:22:66.18:0,66,1878	0/0:23,0:23:60.23:0,60,1940	0/0:18,0:18:51.15:0,51,1363	0/0:19,0:19:57.20:0,57,1862	0/0:31,0:31:93.32:0,93,2806	1/1:1,17:18:51.14:1075,51,0	0/0:17,0:17:51.18:0,51,1528	0/0:17,0:17:51.18:0,51,1562	0/0:5,0:5:15.05:0,15,438	0/0:29,0:29:87.30:0,87,2786	0/0:11,0:11:33.11:0,33,1067	0/0:24,0:24:69.24:0,69,2136	0/0:13,0:13:39.13:0,39,1262	0/0:13,0:13:39.13:0,39,1211	0/0:30,0:30:90.31:0,90,2802	0/0:27,0:27:81.28:0,81,2443	1/1:0,14:14:35.21:609,35,0	1/1:0,12:12:30.10:697,30,0	1/1:0,20:20:27.09:614,27,0	0/0:10,0:10:30.07:0,30,811	0/0:13,0:13:39.13:0,39,1146	0/0:26,0:26:78.27:0,78,2502	0/0:18,0:18:54.19:0,54,1704	0/0:20,0:20:54.17:0,54,1622	1/1:4,15:19:51.18:1176,51,0	0/0:17,0:17:48.16:0,48,1478
chr10	104676515	.	G	GAA	2074.06	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=3.069;DP=569;FS=8.790;HRun=11;HaplotypeScore=78.1851;InbreedingCoeff=0.8453;MQ=58.89;MQ0=4;MQRankSum=-2.215;QD=16.33;ReadPosRankSum=-3.715;VQSLOD=1.2508;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:48:99:0,116,1093	1/1:1,1:9:18.65:169,19,0	0/0:11,0:5:7.81:0,8,63	0/0:17,0:7:11.99:0,12,109	0/0:18,0:18:44.65:0,45,417	0/0:17,0:17:4.68:0,5,25	0/0:10,0:10:1.20:0,1,13	1/1:16,8:24:37.36:491,37,0	0/0:14,0:14:32.98:0,33,309	0/0:19,0:20:23.82:0,24,282	0/0:14,0:14:29.99:0,30,290	0/0:25,0:25:53.86:0,54,508	0/0:8,0:8:17.98:0,18,162	0/0:16,0:16:36.91:0,37,351	0/0:28,0:28:56.60:0,57,528	0/0:16,0:16:36.02:0,36,349	0/0:35,0:35:81.04:0,81,776	0/0:27,0:27:62.50:0,62,584	1/1:8,19:26:60.02:750,60,0	1/1:12,4:16:23.96:303,24,0	1/1:2,8:12:18.79:229,19,0	0/0:15,0:17:32.72:0,33,296	0/0:13,0:13:33.02:0,33,319	0/0:42,0:42:98.90:0,99,958	0/1:16,0:16:2.89:3,0,45	0/0:26,0:26:72.04:0,72,682	1/1:10,9:21:23.57:313,24,0	0/0:18,0:18:29.39:0,29,261
chr10	104676973	.	GC	G	1544.86	PASS	AB=0.875;AC=11;AF=0.196;AN=56;BaseQRankSum=6.289;DP=330;FS=1.146;HRun=7;HaplotypeScore=35.9580;InbreedingCoeff=0.7906;MQ=76.56;MQ0=0;MQRankSum=-1.688;QD=19.81;ReadPosRankSum=-1.948;VQSLOD=2.2943;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:30.08:0,30,363	0/0:5,0:5:11.89:0,12,83	0/0:5,0:5:8.97:0,9,81	0/0:9,0:8:3.01:0,3,74	0/0:13,0:13:36.10:0,36,439	0/0:8,0:8:24.08:0,24,302	0/0:23,0:23:66.21:0,66,830	1/1:1,12:13:36.08:367,36,0	0/0:18,0:18:48.14:0,48,589	0/0:6,0:6:14.99:0,15,170	0/0:1,0:1:3.01:0,3,38	0/0:7,0:7:15.05:0,15,189	0/0:16,0:16:42.09:0,42,510	0/0:14,0:14:39.12:0,39,491	0/0:15,0:15:42.11:0,42,507	0/0:17,0:17:48.15:0,48,604	0/0:21,0:21:57.18:0,57,716	0/0:7,0:7:18.06:0,18,226	1/1:3,7:10:21.04:214,21,0	1/1:1,7:8:21.01:203,21,0	1/1:4,23:27:60.14:612,60,0	0/0:7,0:7:21.07:0,21,264	0/1:6,1:7:18.55:19,0,101	0/0:15,0:15:39.10:0,39,466	0/0:12,0:12:30.10:0,30,375	0/0:10,0:10:27.09:0,27,340	1/1:0,13:13:30.07:306,30,0	0/0:6,0:6:15.04:0,15,177
chr10	104678411	.	A	AACACACAC	1296.64	PASS	AB=0.952;AC=17;AF=0.304;AN=56;BaseQRankSum=3.813;DP=505;FS=4.231;HRun=0;HaplotypeScore=129.3025;InbreedingCoeff=0.6753;MQ=51.81;MQ0=21;MQRankSum=-6.700;QD=7.01;ReadPosRankSum=-6.134;VQSLOD=-0.2532;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:36.12:0,36,774	1/1:12,0:12:17.27:333,17,0	1/1:39,0:14:0.89:2,1,0	0/0:38,0:22:3.01:0,3,46	0/0:16,0:16:20.99:0,21,447	0/1:19,0:20:0.17:243,0,0	1/1:23,0:22:3.01:47,3,0	1/1:23,0:22:27:406,27,0	0/0:11,0:11:9.02:0,9,172	0/0:18,0:18:20.94:0,21,546	0/0:13,0:13:18.06:0,18,414	0/0:12,0:12:21.07:0,21,472	0/0:10,0:9:12.04:0,12,297	0/0:17,0:17:24.02:0,24,591	0/0:15,0:15:18.06:0,18,413	0/0:13,0:15:24.08:0,24,554	0/0:22,0:21:15.03:0,15,309	0/0:16,0:15:21.07:0,21,463	1/1:13,0:12:6.02:140,6,0	1/1:15,0:13:3.01:48,3,0	0/0:12,0:8:2.54:0,3,17	0/0:20,0:19:20.18:0,20,478	0/0:5,0:5:2.84:0,3,16	0/0:25,0:25:32.83:0,33,655	1/1:14,7:24:2.90:69,3,0	0/0:13,0:11:3.66:0,4,216	1/1:13,0:13:7.27:177,7,0	0/0:14,0:12:29.83:0,30,684
chr10	104678445	.	C	CAGAGAGAGAG	576.03	PASS	AB=0.974;AC=9;AF=0.180;AN=50;BaseQRankSum=-0.661;DP=536;FS=10.450;HRun=0;HaplotypeScore=164.8084;InbreedingCoeff=0.4178;MQ=45.61;MQ0=18;MQRankSum=-5.270;QD=5.43;ReadPosRankSum=-3.822;VQSLOD=0.1167;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:27.02:0,27,619	0/0:13,0:14:8.94:0,9,226	./.	./.	0/0:15,0:15:5.93:0,6,177	0/1:23,0:23:26.21:26,0,439	0/0:26,0:25:30.57:0,31,726	1/1:23,0:21:10.15:76,10,0	0/0:20,0:20:21.07:0,21,573	0/0:24,0:24:27.09:0,27,699	0/0:15,0:15:9.03:0,9,247	0/0:23,0:23:26.53:0,27,686	0/0:11,0:9:12.04:0,12,318	0/0:22,0:22:11.36:0,11,293	0/0:18,0:18:12.04:0,12,329	0/0:18,0:18:14.91:0,15,366	0/0:20,0:19:8.89:0,9,281	0/0:21,0:20:27.04:0,27,615	1/1:12,6:17:22.11:453,22,0	1/1:17,0:16:1.72:4,2,0	./.	0/0:32,0:30:20.36:0,20,448	0/1:11,0:12:34.18:34,0,134	0/0:22,0:22:8.70:0,9,265	0/0:33,0:30:27.09:0,27,685	0/0:21,0:19:24.07:0,24,625	0/1:13,0:12:37.46:118,0,37	0/0:24,0:21:17.44:0,17,436
chr10	104679053	.	T	TACATACACACC	2685.39	PASS	AB=0.619;AC=5;AF=0.089;AN=56;BaseQRankSum=4.912;DP=1062;FS=1.592;HRun=0;HaplotypeScore=324.3855;InbreedingCoeff=0.7731;MQ=55.74;MQ0=7;MQRankSum=-8.475;QD=30.87;ReadPosRankSum=-5.393;VQSLOD=1.4002;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:72.18:0,72,2484	0/0:17,0:17:42.14:0,42,1266	0/0:54,0:31:65.79:0,66,1917	0/0:43,0:27:69.21:0,69,1846	0/0:28,0:28:63.20:0,63,1872	1/1:9,21:31:36.04:1432,36,0	1/1:9,20:30:15.49:615,15,0	0/0:53,0:52:99:0,124,4035	0/0:49,0:49:99:0,129,4002	0/0:64,0:64:99:0,163,5123	0/0:27,0:27:69.23:0,69,2096	0/0:60,0:60:99:0,151,4700	0/0:42,0:42:99:0,117,3678	0/0:36,0:36:81.26:0,81,2392	0/0:51,0:51:99:0,105,3213	0/0:45,0:45:99:0,117,3660	0/0:30,0:30:78.22:0,78,2420	0/0:24,0:25:62.91:0,63,1754	0/0:20,0:18:45.15:0,45,1373	0/0:40,0:40:99:0,114,3477	0/0:57,0:56:99:0,144,4391	0/0:28,0:28:72.25:0,72,2215	0/0:33,0:33:90.30:0,90,2889	0/0:39,0:39:99:0,102,3235	0/1:10,14:26:63.66:766,0,64	0/0:46,0:46:99:0,123,3950	0/0:23,0:22:57.20:0,57,1898	0/0:23,0:22:63.22:0,63,2043
chr10	104679850	.	GC	G	3002.16	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.148;DP=157;FS=2.665;HRun=6;HaplotypeScore=213.2471;InbreedingCoeff=0.3550;MQ=40.43;MQ0=0;MQRankSum=0.044;QD=19.37;ReadPosRankSum=2.073;VQSLOD=1.2275;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:9.49:95,9,0	1/1:0,5:5:8.83:96,9,0	0/0:1,0:1:2.90:0,3,16	0/0:1,0:1:3.01:0,3,35	1/1:0,9:9:14.06:116,14,0	1/1:0,7:7:17.71:167,18,0	1/1:0,9:9:17.98:162,18,0	1/1:0,5:5:12.03:127,12,0	1/1:0,4:4:12.03:128,12,0	1/1:0,10:10:30.07:319,30,0	1/1:0,14:14:23.97:188,24,0	1/1:0,2:2:5.96:51,6,0	1/1:0,2:2:6.01:62,6,0	1/1:0,3:3:6.01:63,6,0	1/1:0,7:7:16.97:145,17,0	1/1:0,2:2:6.02:64,6,0	1/1:0,4:4:9.02:96,9,0	1/1:0,2:2:3.47:9,3,0	1/1:0,1:1:3.01:31,3,0	1/1:0,7:7:18.04:189,18,0	1/1:0,6:6:0.15:20,0,0	1/1:0,8:8:13.25:87,13,0	1/1:0,5:5:2.59:10,3,0	1/1:0,3:3:5.62:29,6,0	1/1:0,15:15:30.42:252,30,0	1/1:0,11:11:33.08:349,33,0	1/1:0,5:5:14.60:123,15,0	1/1:0,4:4:12.03:129,12,0
chr10	104679862	.	GC	G	4496.17	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.481;DP=216;FS=9.997;HRun=2;HaplotypeScore=272.3536;InbreedingCoeff=0.4320;MQ=37.62;MQ0=0;MQRankSum=-0.824;QD=21.01;ReadPosRankSum=2.225;VQSLOD=2.9975;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:9.43:115,9,0	1/1:0,6:6:11.80:136,12,0	0/0:1,0:1:3.01:0,3,30	0/0:1,0:1:2.22:0,2,7	1/1:0,10:10:16.22:149,16,0	1/1:1,10:11:29.86:301,30,0	1/1:0,12:12:20.02:227,20,0	1/1:0,8:8:21.05:239,21,0	1/1:0,4:4:12.04:154,12,0	1/1:0,15:15:42.14:541,42,0	1/1:0,14:14:14.92:136,15,0	1/1:1,2:3:8.96:83,9,0	1/1:0,4:4:11.93:113,12,0	1/1:2,4:6:14.88:133,15,0	1/1:0,9:9:23.68:221,24,0	1/1:0,5:5:14.88:134,15,0	1/1:0,8:8:17.97:194,18,0	1/1:0,3:3:7.06:53,7,0	1/1:0,1:1:3.01:38,3,0	1/1:0,8:8:15.05:191,15,0	1/1:2,6:8:10.08:54,10,0	1/1:1,9:10:15.43:121,15,0	1/1:1,11:12:2.48:15,2,0	1/1:0,3:3:5.92:42,6,0	1/1:0,19:19:38.78:356,39,0	1/1:2,12:14:42.05:499,42,0	1/1:1,7:8:17.88:173,18,0	1/1:1,4:5:6.02:77,6,0
chr10	104679870	.	GC	G	3199.14	PASS	AB=0.667;AC=51;AF=0.911;AN=56;BaseQRankSum=3.771;DP=225;FS=2.260;HRun=3;HaplotypeScore=284.5769;InbreedingCoeff=0.2839;MQ=37.28;MQ0=0;MQRankSum=-1.240;QD=14.35;ReadPosRankSum=2.467;VQSLOD=2.8459;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,5:8:8.63:114,9,0	1/1:3,3:6:9.03:111,9,0	0/0:1,0:1:2.98:0,3,22	0/0:1,0:1:2.04:0,2,6	1/1:2,9:11:15.83:143,16,0	1/1:3,8:11:20.91:233,21,0	1/1:4,7:11:14.31:123,14,0	1/1:4,7:11:17.69:193,18,0	1/1:3,1:4:3.01:37,3,0	1/1:7,9:16:24.06:295,24,0	1/1:5,9:14:16.36:117,16,0	1/1:1,3:4:8.97:80,9,0	1/1:1,3:4:9.03:109,9,0	1/1:2,5:7:14.98:165,15,0	1/1:3,7:10:20.60:193,21,0	1/1:2,3:5:9.03:111,9,0	1/1:4,4:8:12.04:148,12,0	1/1:0,3:3:7.06:49,7,0	1/1:0,1:1:3.01:36,3,0	1/1:6,2:8:3.01:35,3,0	0/1:4,4:8:4.30:27,0,4	1/1:1,10:11:13.61:99,14,0	1/1:4,8:12:2.42:14,2,0	1/1:1,2:3:5.86:38,6,0	1/1:7,13:20:35.34:281,35,0	1/1:4,10:14:30.09:366,30,0	1/1:2,6:8:11.87:110,12,0	1/1:3,2:5:6.02:74,6,0
chr10	104679886	.	TG	T	3780.08	PASS	AB=0.778;AC=55;AF=0.982;AN=56;BaseQRankSum=1.062;DP=155;FS=0.000;HRun=2;HaplotypeScore=192.2217;InbreedingCoeff=-0.0613;MQ=73.09;MQ0=0;MQRankSum=-0.719;QD=24.39;ReadPosRankSum=1.117;VQSLOD=3.2523;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:7.11:103,7,0	1/1:0,3:3:9.03:104,9,0	1/1:3,1:4:8.57:95,9,0	0/1:5,2:7:4.41:103,0,4	1/1:0,9:9:17.47:150,17,0	1/1:0,8:8:20.85:216,21,0	1/1:0,7:7:16.92:145,17,0	1/1:0,7:7:18.01:179,18,0	1/1:0,1:1:3.01:34,3,0	1/1:1,8:9:24.07:277,24,0	1/1:1,8:9:21.74:142,22,0	1/1:0,3:3:8.99:90,9,0	1/1:0,3:3:9.03:101,9,0	1/1:0,5:5:15.04:173,15,0	1/1:0,7:7:20.40:194,20,0	1/1:0,3:3:9.03:104,9,0	1/1:0,4:4:12.04:138,12,0	1/1:0,3:3:6.48:45,6,0	1/1:0,1:1:3.01:33,3,0	1/1:0,2:2:5.98:53,6,0	1/1:0,4:4:7.79:52,8,0	1/1:0,10:10:27.26:208,27,0	1/1:0,8:8:23.38:142,23,0	1/1:0,2:2:5.77:34,6,0	1/1:0,13:13:34.69:314,35,0	1/1:0,10:10:30.09:343,30,0	1/1:0,6:6:17.69:140,18,0	1/1:0,2:2:6.02:69,6,0
chr10	104680150	.	T	TC	21077.58	PASS	AB=0.800;AC=54;AF=0.964;AN=56;BaseQRankSum=-5.538;DP=534;FS=10.923;HRun=1;HaplotypeScore=114.4339;InbreedingCoeff=-0.0383;MQ=73.80;MQ0=0;MQRankSum=-3.695;QD=39.47;ReadPosRankSum=4.985;VQSLOD=3.6364;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:30:78.26:1245,78,0	1/1:0,9:9:27.09:431,27,0	0/1:22,8:26:99:397,0,177	0/1:22,7:27:99:419,0,106	1/1:0,19:19:54.01:798,54,0	1/1:0,20:20:51.17:811,51,0	1/1:0,31:31:81.28:1292,81,0	1/1:1,22:23:66.19:1006,66,0	1/1:0,9:9:27.02:400,27,0	1/1:0,15:14:42.11:643,42,0	1/1:1,18:19:51.09:783,51,0	1/1:0,33:33:84.22:1309,84,0	1/1:0,12:11:33.11:527,33,0	1/1:0,13:13:39.06:591,39,0	1/1:0,15:15:42.14:670,42,0	1/1:0,14:14:36.12:574,36,0	1/1:1,22:23:57.19:910,57,0	1/1:0,26:26:75.17:1167,75,0	1/1:0,12:11:33.09:502,33,0	1/1:1,14:15:39.13:611,39,0	1/1:0,34:34:96.26:1503,96,0	1/1:0,14:14:42.06:635,42,0	1/1:0,11:11:33.11:526,33,0	1/1:0,25:25:72.25:1149,72,0	1/1:1,13:14:39.13:622,39,0	1/1:0,16:16:48.16:766,48,0	1/1:0,15:16:39.12:598,39,0	1/1:0,6:6:12.04:192,12,0
chr10	104681016	.	T	TC	2728.42	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-11.566;DP=760;FS=0.000;HRun=4;HaplotypeScore=74.3951;InbreedingCoeff=0.9998;MQ=91.80;MQ0=0;MQRankSum=-4.737;QD=32.87;ReadPosRankSum=0.960;VQSLOD=4.1428;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,1599	0/0:14,0:14:42.12:0,42,475	0/0:33,0:33:78.14:0,78,834	0/0:29,0:29:66.13:0,66,701	0/0:22,0:22:63.17:0,63,706	1/1:2,23:25:63.21:861,63,0	1/1:4,28:32:78.26:1067,78,0	0/0:30,0:30:72.20:0,72,817	0/0:21,0:21:51.12:0,51,567	0/0:31,0:31:84.23:0,84,939	0/0:21,0:21:51.13:0,51,568	0/0:25,0:25:69.18:0,69,772	0/0:19,0:19:54.14:0,54,602	0/0:25,0:25:60.06:0,60,662	0/0:38,0:38:99:0,108,1225	0/0:28,0:28:84.22:0,84,943	0/0:46,0:46:99:0,135,1520	0/0:26,0:26:72.17:0,72,803	0/0:31,0:31:72.20:0,72,815	0/0:25,0:25:75.21:0,75,849	0/0:33,0:33:87.24:0,87,987	0/0:15,0:15:42.07:0,42,453	0/0:14,0:14:36.06:0,36,394	0/0:25,0:25:60.17:0,60,680	1/1:0,26:26:69.23:943,69,0	0/0:30,0:30:84.24:0,84,953	0/0:33,0:33:93.26:0,93,1054	0/0:14,0:14:33.09:0,33,374
chr10	104683862	.	C	CTGGCCACTGACA	26438.94	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-4.455;DP=822;FS=5.977;HRun=0;HaplotypeScore=267.2017;InbreedingCoeff=0.9975;MQ=87.59;MQ0=0;MQRankSum=-18.206;QD=117.51;ReadPosRankSum=-2.605;VQSLOD=3.8836;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,4608	1/1:8,10:20:51.17:2563,51,0	0/0:33,0:33:99:0,99,3305	0/0:31,0:31:84.17:0,84,2602	0/0:30,0:29:87.77:0,88,3206	1/1:6,8:20:42.14:1913,42,0	1/1:14,13:29:72.18:3970,72,0	1/1:23,7:36:99:4903,105,0	0/0:44,0:44:99:0,126,4371	0/0:44,0:44:99:0,123,4241	0/0:27,0:27:78.27:0,78,2835	0/0:32,0:32:96.30:0,96,3334	0/0:26,0:26:75.26:0,75,2689	0/0:25,0:25:75.24:0,75,2804	0/0:30,0:30:90.28:0,90,3116	0/0:30,0:30:87.30:0,87,3274	0/0:28,0:28:81.22:0,81,2694	0/0:22,0:22:66.23:0,66,2499	1/1:12,2:15:33.18:1739,33,0	1/1:18,13:35:57.20:3185,57,0	1/1:7,5:15:15.05:935,15,0	0/0:32,0:32:87.27:0,87,2968	0/0:38,0:38:99:0,102,3736	0/0:27,0:27:78.27:0,78,2965	1/1:11,9:23:48.11:2550,48,0	0/0:32,0:32:87.29:0,87,2993	1/1:14,17:32:81.28:4681,81,0	0/0:22,0:22:60.21:0,60,2243
chr10	104684344	.	CT	C	2113.98	PASS	AB=0.811;AC=19;AF=0.339;AN=56;BaseQRankSum=9.116;DP=519;FS=3.736;HRun=11;HaplotypeScore=63.5070;InbreedingCoeff=0.6794;MQ=64.47;MQ0=5;MQRankSum=-0.427;QD=9.83;ReadPosRankSum=1.937;VQSLOD=2.8543;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:34,4:38:14.74:15,0,640	1/1:1,0:9:4.04:12,4,0	0/0:16,0:9:2.19:0,2,31	0/0:13,0:6:9:0,9,80	0/0:16,1:18:14.18:0,14,310	1/1:4,16:20:9.39:244,9,0	1/1:5,9:14:7.27:177,7,0	1/1:5,20:25:56.91:468,57,0	0/0:12,0:12:24.05:0,24,248	0/1:15,2:17:2.92:3,0,360	0/0:18,0:18:45.07:0,45,461	0/0:13,0:13:27.07:0,27,287	0/0:10,0:10:18.05:0,18,192	0/0:12,1:15:11.31:0,11,308	0/0:15,0:16:38.93:0,39,398	0/0:13,1:14:5.24:0,5,263	0/0:38,0:38:99:0,99,1033	0/0:12,0:11:33.08:0,33,350	1/1:3,12:15:35.95:295,36,0	1/1:2,15:18:45.40:370,45,0	0/1:8,11:18:26.38:159,0,26	0/0:19,0:19:50.70:0,51,513	0/0:26,0:25:54.59:0,55,567	0/0:22,0:22:38.84:0,39,579	1/1:5,14:19:23.94:197,24,0	0/0:26,0:26:63.13:0,63,655	1/1:3,17:20:44.94:369,45,0	0/0:16,0:16:42.07:0,42,435
chr10	104684363	.	T	TC	54.34	PASS	AB=0.762;AC=1;AF=0.019;AN=54;BaseQRankSum=3.686;DP=509;FS=3.474;HRun=1;HaplotypeScore=74.7662;InbreedingCoeff=-0.0283;MQ=57.38;MQ0=11;MQRankSum=-2.609;QD=3.40;ReadPosRankSum=1.309;VQSLOD=0.2652;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:37:87.21:0,87,1079	0/0:9,0:9:18.04:0,18,208	0/0:4,0:4:0.69:0,1,35	./.	0/0:16,0:16:41.98:0,42,447	0/0:16,0:16:42.14:0,42,541	0/0:14,1:13:32.90:0,33,360	0/0:21,0:18:54.10:0,54,661	0/0:13,0:13:33.08:0,33,397	0/0:20,0:20:60.10:0,60,698	0/0:23,0:23:54.09:0,54,637	0/0:12,0:12:27.01:0,27,313	0/0:9,0:9:26.99:0,27,310	0/0:18,0:18:48.13:0,48,594	0/0:22,0:22:57.14:0,57,674	0/0:12,0:12:32.80:0,33,375	0/0:42,0:41:99:0,117,1422	0/0:14,0:13:20.02:0,20,380	0/0:9,0:9:24.04:0,24,276	0/0:28,0:28:63.02:0,63,722	0/1:11,5:15:99:129,0,273	0/0:19,0:17:51.05:0,51,606	0/0:26,0:25:48.02:0,48,564	0/0:20,0:20:54.12:0,54,679	0/0:15,0:15:33.09:0,33,394	0/0:21,0:20:57.11:0,57,655	0/0:22,0:22:60.15:0,60,721	0/0:20,0:20:37.01:0,37,594
chr10	104684452	.	CT	C	1123.98	PASS	AB=0.976;AC=14;AF=0.250;AN=56;BaseQRankSum=8.083;DP=513;FS=4.426;HRun=8;HaplotypeScore=69.1153;InbreedingCoeff=0.8374;MQ=68.66;MQ0=3;MQRankSum=-4.676;QD=10.50;ReadPosRankSum=-0.245;VQSLOD=2.1759;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:97.35:0,97,1160	1/1:1,7:8:21.03:203,21,0	0/1:20,0:15:9:9,0,108	0/1:19,1:12:2.20:2,0,152	0/0:31,0:31:78.22:0,78,928	0/0:24,0:24:69.21:0,69,831	0/0:22,0:22:51.11:0,51,597	1/1:10,8:16:24.03:232,24,0	0/0:14,0:14:33.10:0,33,398	0/0:23,0:23:57.17:0,57,680	0/0:19,0:19:51.16:0,51,616	0/0:15,0:15:42.13:0,42,507	0/0:15,0:15:42.13:0,42,507	0/0:10,0:10:21.05:0,21,242	0/0:17,0:17:36.09:0,36,421	0/0:19,0:19:51.16:0,51,616	0/0:39,0:39:99:0,102,1231	0/0:20,0:19:48.15:0,48,578	1/1:1,7:8:21.03:203,21,0	1/1:2,13:15:36.06:347,36,0	1/1:3,3:6:9.01:87,9,0	0/0:11,0:11:33.10:0,33,399	0/0:18,0:18:51.14:0,51,602	0/0:24,0:24:63.19:0,63,759	0/0:15,0:14:36.11:0,36,435	0/0:20,0:20:51.08:0,51,586	1/1:5,7:12:25.80:227,26,0	0/0:13,0:13:29.94:0,30,328
chr10	104684468	.	CT	C	2320.67	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.474;DP=486;FS=3.349;HRun=8;HaplotypeScore=58.9804;InbreedingCoeff=0.9567;MQ=65.19;MQ0=3;MQRankSum=-3.819;QD=18.13;ReadPosRankSum=1.254;VQSLOD=3.6413;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:78.17:0,78,994	1/1:3,5:8:15.01:145,15,0	0/0:13,1:8:9.47:0,9,90	0/0:19,0:10:8.61:0,9,93	0/0:26,0:26:75.19:0,75,869	1/1:1,25:26:63.10:608,63,0	1/1:2,16:18:36.06:348,36,0	1/1:4,5:7:12.01:116,12,0	0/0:10,0:10:21.06:0,21,254	0/0:23,0:23:60.17:0,60,708	0/0:25,0:25:57.17:0,57,682	0/0:17,0:17:48.12:0,48,558	0/0:13,0:13:36.10:0,36,421	0/0:12,0:12:33.09:0,33,380	0/0:8,0:8:15.03:0,15,170	0/0:20,0:20:48.13:0,48,568	0/0:38,0:38:90.25:0,90,1059	0/0:18,2:19:43.22:0,43,587	1/1:5,6:10:20.93:184,21,0	1/1:8,10:18:36.04:344,36,0	1/1:2,4:6:9.01:87,9,0	0/0:17,0:17:42.13:0,42,507	0/0:17,0:17:45.11:0,45,528	0/0:24,0:24:63.18:0,63,749	1/1:2,16:17:36.05:345,36,0	0/0:17,0:17:48.15:0,48,580	1/1:4,10:14:38.55:356,39,0	0/0:7,0:7:12.04:0,12,145
chr10	104684604	.	G	GGTGGTCCTATTTCT	27174.61	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-0.468;DP=616;FS=5.329;HRun=0;HaplotypeScore=223.9552;InbreedingCoeff=0.9995;MQ=84.89;MQ0=0;MQRankSum=-18.107;QD=157.99;ReadPosRankSum=-3.195;VQSLOD=3.9109;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,157,6282	1/1:4,3:8:24.08:1303,24,0	0/0:23,0:23:54.12:0,54,2101	0/0:23,0:23:61.58:0,62,1733	0/0:24,0:24:72.23:0,72,2861	1/1:7,17:25:69.24:4674,69,0	1/1:15,17:32:90.31:5553,90,0	1/1:14,0:14:39.13:1961,39,0	0/0:22,0:22:66.21:0,66,2671	0/0:17,0:17:51.17:0,51,2102	0/0:18,0:18:48.16:0,48,1873	0/0:24,0:24:66.23:0,66,2751	0/0:18,0:18:54.19:0,54,2286	0/0:20,0:20:60.21:0,60,2524	0/0:28,0:28:84.27:0,84,3506	0/0:21,0:21:60.21:0,60,2517	0/0:31,0:31:93.32:0,93,3768	0/0:23,0:23:69.24:0,69,2804	1/1:11,7:19:57.20:3272,57,0	1/1:9,9:19:57.20:3134,57,0	1/1:13,4:17:26.80:1108,27,0	0/0:13,0:13:39.13:0,39,1616	0/0:21,0:21:57.18:0,57,1983	0/0:30,0:30:87.23:0,87,3311	1/1:11,9:22:60.21:3588,60,0	0/0:20,0:20:60.21:0,60,2436	1/1:6,7:14:42.14:2583,42,0	0/0:13,0:13:36.09:0,36,1343
chr10	104684848	.	A	AT	1145.59	PASS	AB=0.913;AC=10;AF=0.179;AN=56;BaseQRankSum=-0.384;DP=540;FS=3.353;HRun=11;HaplotypeScore=91.4092;InbreedingCoeff=0.6935;MQ=67.43;MQ0=11;MQRankSum=-1.103;QD=11.34;ReadPosRankSum=0.406;VQSLOD=3.4428;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,1:39:46.54:0,47,532	1/1:0,0:2:5.68:29,6,0	0/0:11,0:10:9.20:0,9,73	0/0:14,0:10:5.56:0,6,43	0/0:34,0:38:73.86:0,74,534	1/1:20,3:21:48.10:487,48,0	1/1:7,7:14:26.84:246,27,0	0/0:32,0:32:59.31:0,59,458	0/0:13,0:14:22.91:0,23,168	0/0:14,1:17:3.40:0,3,183	0/1:10,1:12:1.64:2,0,163	0/0:14,0:14:38.85:0,39,301	0/0:18,0:17:32.86:0,33,255	0/0:13,0:12:26.77:0,27,208	0/0:18,1:19:11.36:0,11,271	0/0:16,0:16:35.84:0,36,279	0/1:25,3:28:22.34:22,0,394	0/0:18,0:15:35.86:0,36,279	0/0:20,0:19:47.76:0,48,371	0/0:20,0:21:45.95:0,46,352	0/0:9,0:9:26.90:0,27,209	0/0:16,0:17:37.87:0,38,281	0/0:26,1:27:25.24:0,25,362	0/0:25,0:25:36.92:0,37,267	1/1:12,9:20:51.10:517,51,0	0/0:14,0:15:31.91:0,32,238	0/0:27,0:25:59.76:0,60,464	0/0:10,0:10:17.90:0,18,136
chr10	104684864	.	CT	C	2465.30	PASS	AB=0.952;AC=19;AF=0.339;AN=56;BaseQRankSum=13.130;DP=526;FS=0.426;HRun=9;HaplotypeScore=75.7181;InbreedingCoeff=0.8657;MQ=53.25;MQ0=32;MQRankSum=-3.448;QD=13.77;ReadPosRankSum=1.888;VQSLOD=3.7252;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,1:36:52.44:0,52,876	1/1:2,0:2:5.65:31,6,0	0/0:6,0:4:3.24:0,3,49	0/0:6,0:4:5.96:0,6,43	0/0:34,0:32:63.16:0,63,708	1/1:19,2:20:39:356,39,0	1/1:9,7:15:21:192,21,0	1/1:6,20:25:54:494,54,0	0/0:14,0:11:21.06:0,21,241	0/1:19,1:17:0.33:0,0,240	0/0:14,1:13:2.66:0,3,284	0/0:14,0:14:30.08:0,30,338	0/0:12,0:11:30.08:0,30,338	0/0:17,0:15:36.11:0,36,415	0/0:20,0:20:51.11:0,51,574	0/0:18,0:18:45.12:0,45,510	0/0:28,0:30:68.66:0,69,721	0/0:24,0:20:36.10:0,36,404	1/1:5,16:20:41.96:377,42,0	1/1:6,12:17:26.99:247,27,0	1/1:0,6:8:22.08:177,22,0	0/0:14,0:14:27.08:0,27,308	0/0:28,0:26:62.75:0,63,685	0/0:29,0:25:42.08:0,42,470	1/1:14,4:18:33.48:303,33,0	0/0:19,0:18:39.11:0,39,447	1/1:4,24:26:54.03:493,54,0	0/0:7,0:5:12.04:0,12,138
chr10	104685486	.	G	GTA	93.37	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.789;DP=454;FS=1.312;HRun=0;HaplotypeScore=78.1682;InbreedingCoeff=0.7006;MQ=62.66;MQ0=20;MQRankSum=0.019;QD=2.17;ReadPosRankSum=-0.837;VQSLOD=1.7405;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:44.88:0,45,527	0/0:7,0:7:17.84:0,18,141	0/0:38,0:22:35.54:0,36,536	0/0:24,0:10:20.36:0,20,259	0/0:15,0:15:27:0,27,278	1/1:9,0:9:8.95:91,9,0	1/1:1,15:15:0.47:1,0,0	0/0:23,0:21:60.34:0,60,508	0/0:14,0:13:10.48:0,10,218	0/0:17,0:16:44.97:0,45,467	0/0:10,0:10:18.03:0,18,214	0/0:10,0:10:13.27:0,13,160	0/0:9,0:9:7.68:0,8,97	0/0:7,0:7:15.04:0,15,189	0/0:14,0:14:24.05:0,24,313	0/0:19,0:17:36.09:0,36,473	0/0:17,0:17:40.86:0,41,491	0/0:10,0:8:24:0,24,263	0/0:15,0:14:32.23:0,32,266	0/0:21,0:20:22.10:0,22,171	0/0:27,0:23:41.78:0,42,356	0/0:15,0:14:35.62:0,36,393	0/0:18,0:17:33.02:0,33,351	0/0:26,0:23:35.97:0,36,426	1/1:18,0:18:1.41:100,1,0	0/0:14,0:14:38.93:0,39,380	0/0:8,0:6:9.58:0,10,102	0/0:7,0:5:12.86:0,13,115
chr10	104685764	.	C	CAGAT	3121.73	PASS	AB=0.837;AC=21;AF=0.404;AN=52;BaseQRankSum=-2.932;DP=665;FS=2.104;HRun=0;HaplotypeScore=119.3539;InbreedingCoeff=0.1054;MQ=61.65;MQ0=25;MQRankSum=0.733;QD=8.41;ReadPosRankSum=-1.475;VQSLOD=2.5670;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:26:30.02:0,30,404	0/0:10,0:10:3.47:0,3,29	./.	./.	0/1:12,10:22:21.10:197,0,21	0/1:10,0:26:2.75:3,0,3	0/1:18,0:17:0:0,0,0	1/1:31,0:30:2.49:6,2,0	1/1:10,8:20:18.06:417,18,0	0/0:23,0:23:27.09:0,27,409	0/1:20,0:19:54.52:55,0,166	0/1:12,9:23:33.49:197,0,33	1/1:10,14:25:24.08:556,24,0	0/1:9,10:21:27.47:330,0,27	0/0:28,0:30:45.15:0,45,664	0/0:26,0:26:20.17:0,20,595	0/1:14,8:22:75.99:194,0,76	0/1:21,7:30:14.39:262,0,14	0/1:20,0:20:26.83:239,0,27	0/0:16,0:16:2.80:0,3,13	1/1:16,0:16:9.03:162,9,0	0/1:18,7:26:36.49:128,0,36	0/0:21,0:18:15.05:0,15,225	0/1:23,2:25:42.46:42,0,288	0/0:12,0:12:2.22:0,2,7	0/0:22,0:23:32.12:0,32,425	1/1:25,0:25:27.09:497,27,0	0/0:7,0:7:12.04:0,12,182
chr10	104685766	.	G	GATAGATAA	1965.55	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=4.413;DP=664;FS=1.792;HRun=0;HaplotypeScore=163.4429;InbreedingCoeff=0.4257;MQ=61.40;MQ0=26;MQRankSum=1.605;QD=7.42;ReadPosRankSum=-4.280;VQSLOD=1.5969;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:26:60.05:0,60,976	0/1:10,0:10:6.18:123,0,6	0/0:45,0:22:30:0,30,275	0/0:49,0:18:21.70:0,22,275	0/1:23,0:22:15.13:15,0,132	0/0:26,0:26:16.90:0,17,206	0/0:18,0:17:32.90:0,33,267	1/1:35,0:34:92.67:782,93,0	0/1:19,0:19:39.19:39,0,132	0/0:23,0:23:56.91:0,57,982	0/0:20,0:19:28.85:0,29,517	0/1:23,0:23:0.10:0,0,270	0/1:25,0:25:56.62:57,0,149	0/1:21,0:21:29.22:29,0,192	0/0:30,0:30:78.12:0,78,1468	0/0:26,0:26:75.07:0,75,1371	0/0:22,0:22:2.86:0,3,340	0/1:32,0:31:15:15,0,342	1/1:19,0:19:20.33:455,20,0	1/1:6,12:18:21.69:157,22,0	1/1:16,0:16:9.03:104,9,0	0/0:26,0:26:18.41:0,18,360	0/0:19,0:16:32.99:0,33,526	0/0:25,0:25:39.42:0,39,767	0/0:11,0:12:26.81:0,27,208	0/0:22,0:21:57.09:0,57,1010	1/1:24,0:24:35.96:371,36,0	0/0:7,0:7:18.03:0,18,376
chr10	104685770	.	G	GATAA	3990.02	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=0.172;DP=661;FS=1.745;HRun=0;HaplotypeScore=113.1019;InbreedingCoeff=0.1384;MQ=60.22;MQ0=27;MQRankSum=-1.294;QD=11.98;ReadPosRankSum=-3.070;VQSLOD=2.4653;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:26:60.05:0,60,775	0/1:11,0:11:5.49:120,0,5	0/0:43,0:20:29.40:0,29,271	0/0:48,0:17:20.44:0,20,273	0/1:20,0:19:99:111,0,128	0/0:26,0:26:32.54:0,33,244	0/0:18,0:17:32.87:0,33,267	1/1:40,0:39:99:920,112,0	0/1:21,0:21:99:225,0,153	0/0:20,0:20:58.16:0,58,764	0/1:19,0:18:4.58:5,0,409	0/1:22,0:22:94.71:95,0,245	0/1:26,0:26:99:308,0,190	0/1:20,0:20:99:188,0,166	0/0:32,0:32:84.10:0,84,1153	0/0:26,0:26:75.07:0,75,1057	0/1:22,0:22:91.70:92,0,290	0/1:31,0:30:99:114,0,384	1/1:3,16:19:32.15:640,32,0	0/1:16,0:16:48.26:73,0,48	1/1:0,15:17:9.03:243,9,0	0/1:25,0:25:51.31:51,0,323	0/0:21,0:18:35.98:0,36,451	0/0:23,0:23:6.95:0,7,596	0/0:12,0:12:26.93:0,27,219	0/0:23,0:22:57.09:0,57,785	1/1:2,21:23:38.94:805,39,0	0/0:7,0:7:18.03:0,18,276
chr10	104689723	.	CTG	C	2861.59	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.532;DP=721;FS=2.364;HRun=0;HaplotypeScore=113.7823;InbreedingCoeff=0.9999;MQ=87.35;MQ0=0;MQRankSum=-15.181;QD=25.32;ReadPosRankSum=-0.784;VQSLOD=4.1657;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,2398	1/1:1,14:15:37.76:385,38,0	0/0:43,0:43:99:0,129,2532	0/0:28,0:28:84.27:0,84,1662	0/0:24,0:24:72.25:0,72,1461	0/0:17,0:17:48.16:0,48,975	0/0:38,0:38:99:0,114,2254	1/1:1,22:23:66.15:733,66,0	0/0:28,0:28:84.29:0,84,1705	0/0:37,0:37:99:0,111,2223	0/0:24,0:24:72.25:0,72,1460	0/0:27,0:27:81.28:0,81,1644	0/0:20,0:20:60.21:0,60,1219	0/0:23,0:23:69.21:0,69,1315	0/0:32,0:32:96.27:0,96,1793	0/0:39,0:39:99:0,117,2375	0/0:34,0:34:99:0,99,1935	0/0:21,0:21:60.19:0,60,1183	1/1:1,15:16:48.13:536,48,0	1/1:1,20:21:56.28:554,56,0	1/1:0,15:15:29.80:268,30,0	0/0:21,0:21:63.19:0,63,1199	0/0:23,0:23:69.22:0,69,1366	0/0:26,0:26:78.24:0,78,1513	0/0:17,0:17:51.18:0,51,1036	0/0:30,0:30:90.30:0,90,1778	1/1:1,22:23:59.91:574,60,0	0/0:16,0:16:48.16:0,48,961
chr10	104689728	.	TAC	T	2832.95	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.548;DP=715;FS=3.622;HRun=0;HaplotypeScore=113.6259;InbreedingCoeff=0.9998;MQ=86.11;MQ0=0;MQRankSum=-14.549;QD=24.42;ReadPosRankSum=-0.754;VQSLOD=4.1996;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,2131	1/1:0,14:14:38.92:384,39,0	0/0:45,0:45:99:0,135,2503	0/0:24,0:24:69.15:0,69,1254	0/0:24,0:24:72.23:0,72,1349	0/0:16,0:16:45.14:0,45,835	0/0:40,0:40:99:0,120,2293	1/1:0,24:24:69.16:747,69,0	0/0:30,0:30:90.30:0,90,1701	0/0:37,0:37:99:0,108,2012	0/0:23,0:23:69.24:0,69,1322	0/0:26,0:26:78.25:0,78,1466	0/0:21,0:21:60.21:0,60,1149	0/0:22,0:22:66.21:0,66,1231	0/0:28,0:28:84.27:0,84,1566	0/0:36,0:36:99:0,105,1994	0/0:34,0:34:99:0,99,1911	0/0:23,0:23:66.18:0,66,1236	1/1:2,15:17:51.13:562,51,0	1/1:1,20:21:56.63:565,57,0	1/1:2,15:18:28.38:270,28,0	0/0:20,0:20:60.21:0,60,1159	0/0:26,0:26:75.24:0,75,1376	0/0:24,0:24:72.25:0,72,1377	0/0:19,0:19:54.17:0,54,1009	0/0:29,0:29:87.30:0,87,1681	1/1:0,22:22:49.49:493,49,0	0/0:15,0:15:45.15:0,45,869
chr10	104689928	.	GC	G	2367.90	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.642;DP=648;FS=3.985;HRun=6;HaplotypeScore=85.9138;InbreedingCoeff=0.9909;MQ=64.86;MQ0=0;MQRankSum=-1.033;QD=25.19;ReadPosRankSum=1.934;VQSLOD=3.7426;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,117,1521	0/0:15,0:15:42.11:0,42,517	0/0:14,0:14:13.83:0,14,412	0/0:13,0:13:36.05:0,36,427	0/0:16,0:16:29.95:0,30,394	1/1:1,18:19:45.11:484,45,0	1/1:2,39:41:96.24:1032,96,0	0/0:30,0:30:78.25:0,78,1013	0/0:18,0:18:48.16:0,48,630	0/0:21,0:21:57.18:0,57,734	0/0:15,0:15:36.06:0,36,451	0/0:30,0:30:87.22:0,87,1095	0/0:24,0:24:72.23:0,72,946	0/0:19,0:19:51.15:0,51,656	0/0:27,0:27:81.24:0,81,1037	0/0:18,0:18:54.15:0,54,691	0/0:29,0:29:84.27:0,84,1104	0/0:26,0:26:69.22:0,69,906	0/0:18,0:17:45.14:0,45,575	0/0:21,0:21:60.18:0,60,769	0/0:40,0:40:99:0,117,1502	0/0:15,0:15:42.14:0,42,552	0/0:17,0:17:45.14:0,45,584	0/0:31,0:31:87.28:0,87,1145	1/1:1,33:34:93.23:996,93,0	0/0:24,0:24:69.13:0,69,870	0/0:20,0:20:60.17:0,60,771	0/0:8,0:8:21.07:0,21,276
chr10	104690232	.	AG	A	18144.31	PASS	AB=0.577;AC=53;AF=0.981;AN=54;BaseQRankSum=-1.424;DP=576;FS=3.443;HRun=3;HaplotypeScore=280.6610;InbreedingCoeff=-0.0175;MQ=47.18;MQ0=0;MQRankSum=-1.089;QD=31.61;ReadPosRankSum=0.774;VQSLOD=3.4257;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,31:38:84.07:950,84,0	1/1:1,8:9:27.06:318,27,0	1/1:4,5:9:12.03:142,12,0	./.	1/1:1,19:20:47.36:561,47,0	1/1:1,14:14:41.60:477,42,0	1/1:1,22:23:68.57:813,69,0	1/1:4,16:20:54.11:639,54,0	1/1:3,26:29:84.17:991,84,0	1/1:3,21:24:63.03:756,63,0	1/1:0,12:12:30.09:370,30,0	1/1:1,36:36:99:1321,108,0	1/1:2,29:31:90.27:1098,90,0	1/1:1,26:27:81.24:987,81,0	1/1:2,22:24:69.20:837,69,0	1/1:4,22:26:72.16:849,72,0	1/1:0,20:20:54.17:668,54,0	1/1:2,9:11:24.07:296,24,0	1/1:6,18:24:63.14:731,63,0	1/1:0,22:22:63.20:777,63,0	1/1:2,19:21:36.58:445,37,0	1/1:2,24:26:75.18:906,75,0	1/1:1,9:10:29.44:329,29,0	0/1:4,11:15:7.58:168,0,8	1/1:3,25:28:72.22:884,72,0	1/1:2,29:31:90.27:1100,90,0	1/1:1,14:14:39.11:471,39,0	1/1:0,7:7:21.07:260,21,0
chr10	104690245	.	CAGTTCCCAAGTACTAGCGGAA	C	5778.75	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-1.625;DP=571;FS=13.355;HRun=0;HaplotypeScore=561.9415;InbreedingCoeff=0.9445;MQ=39.34;MQ0=0;MQRankSum=-0.493;QD=105.07;ReadPosRankSum=3.788;VQSLOD=4.2354;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,3251	0/0:11,0:11:33.11:0,33,1608	0/0:4,0:4:6.91:0,7,96	0/0:4,0:4:9.03:0,9,287	0/0:20,0:20:48.12:0,48,1910	1/1:5,7:11:18.06:1033,18,0	1/1:9,11:20:33.11:1916,33,0	0/0:17,0:17:45.15:0,45,1817	0/0:30,0:30:84.25:0,84,3971	0/0:27,0:27:69.24:0,69,2949	0/0:13,0:13:30.02:0,30,975	0/0:37,0:36:99:0,105,5274	0/0:29,0:29:84.29:0,84,4125	0/0:27,0:27:81.28:0,81,4193	0/0:28,0:28:84.25:0,84,3804	0/0:21,0:21:63.22:0,63,2972	0/0:22,0:22:63.20:0,63,2725	0/0:11,0:11:33.11:0,33,1590	0/0:28,0:28:78.27:0,78,3071	0/0:23,0:23:63.17:0,63,2584	0/0:23,0:22:60.50:0,61,1871	0/0:30,0:30:87.25:0,87,3489	0/0:11,0:11:27.09:0,27,1116	0/0:14,0:14:29.36:0,29,1284	1/1:6,17:23:48.16:2830,48,0	0/0:28,0:28:72.25:0,72,3461	0/0:14,0:13:36.09:0,36,1640	0/0:8,0:8:21.07:0,21,1191
chr10	104691579	.	G	GA	10045.97	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-1.046;DP=581;FS=1.239;HRun=9;HaplotypeScore=148.8297;InbreedingCoeff=0.9501;MQ=57.45;MQ0=0;MQRankSum=-11.365;QD=23.53;ReadPosRankSum=-2.740;VQSLOD=2.6680;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,21:31:31.57:572,32,0	1/1:8,11:19:26.51:252,27,0	0/0:6,0:6:5.34:0,5,22	0/1:7,0:6:0:0,0,0	1/1:7,25:32:49.07:742,49,0	1/1:8,13:21:48.10:513,48,0	1/1:6,9:15:27.07:298,27,0	1/1:8,23:31:43.17:680,43,0	0/0:17,0:17:35.98:0,36,313	1/1:5,22:27:43.13:703,43,0	1/1:3,17:20:42.07:451,42,0	0/0:28,0:28:80.97:0,81,699	0/0:18,0:18:44.99:0,45,390	0/0:24,0:24:62.96:0,63,543	1/1:4,23:27:63.09:663,63,0	1/1:0,17:17:48.10:518,48,0	1/1:6,17:23:47.77:521,48,0	1/1:3,8:12:20.85:200,21,0	1/1:4,14:19:47.96:505,48,0	1/1:3,27:30:78.13:835,78,0	1/1:4,13:17:21.06:232,21,0	0/0:21,0:21:50.98:0,51,443	0/0:19,0:19:41.98:0,42,364	0/0:21,0:21:56.98:0,57,494	1/1:5,18:23:57.15:629,57,0	1/1:1,28:29:84.23:928,84,0	1/1:2,16:18:25.08:504,25,0	1/1:0,9:9:27.07:299,27,0
chr10	104691639	.	A	AG	1059.84	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-3.021;DP=722;FS=35.506;HRun=0;HaplotypeScore=216.6213;InbreedingCoeff=0.3146;MQ=75.42;MQ0=0;MQRankSum=1.172;QD=3.97;ReadPosRankSum=-8.415;VQSLOD=0.6396;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:43:55.72:56,0,254	0/0:10,0:10:19.77:0,20,94	0/1:26,0:26:2.85:3,0,134	0/1:24,0:24:13.52:14,0,100	0/0:27,0:27:22.89:0,23,237	1/1:28,2:30:69.58:530,70,0	1/1:24,2:26:55.88:360,56,0	0/0:38,0:38:13.89:0,14,200	0/0:24,0:24:8.83:0,9,168	0/0:32,0:32:16.79:0,17,192	0/0:33,0:33:60.08:0,60,378	0/0:28,0:28:42.10:0,42,236	0/0:20,0:20:27.29:0,27,204	0/0:21,0:21:53.83:0,54,223	0/0:33,0:33:27.58:0,28,289	0/0:19,0:19:43.57:0,44,184	0/0:22,0:22:52.94:0,53,244	0/1:29,0:29:21.16:21,0,192	0/1:19,0:19:11.48:11,0,104	0/0:35,0:35:83.42:0,83,383	0/0:25,0:25:40.87:0,41,258	0/0:17,0:17:44.01:0,44,194	0/0:28,0:28:25.31:0,25,247	0/1:40,0:40:15.29:15,0,269	1/1:16,0:16:29.53:184,30,0	0/0:29,0:29:51:0,51,279	0/0:14,0:14:14.32:0,14,147	0/1:14,0:14:33.55:34,0,83
chr10	104691716	.	A	AGGAT	6019.24	PASS	AB=0.776;AC=25;AF=0.521;AN=48;BaseQRankSum=-7.650;DP=813;FS=7.255;HRun=0;HaplotypeScore=186.1554;InbreedingCoeff=0.6206;MQ=68.29;MQ0=5;MQRankSum=2.675;QD=13.26;ReadPosRankSum=-0.628;VQSLOD=3.9125;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,20:51:21.07:489,21,0	0/0:12,0:12:2.98:0,3,22	./.	./.	1/1:27,6:33:24.08:557,24,0	0/0:20,0:20:6.02:0,6,70	0/0:20,0:20:0.89:0,1,2	./.	1/1:15,13:28:18.06:419,18,0	0/0:38,0:36:30.09:0,30,437	0/0:22,0:22:21.05:0,21,293	1/1:16,18:35:26.40:622,26,0	1/1:16,0:16:6.02:125,6,0	1/1:13,12:28:18.06:418,18,0	1/1:27,21:51:27.09:628,27,0	0/0:28,0:28:45.15:0,45,685	0/1:22,26:48:55.45:662,0,55	0/1:16,15:32:4.21:406,0,4	1/1:11,0:23:2.96:19,3,0	./.	0/0:32,0:32:5.96:0,6,67	1/1:25,2:27:25.33:575,25,0	1/1:28,3:31:25.47:581,25,0	1/1:22,13:35:21.07:489,21,0	0/0:17,0:17:9.02:0,9,97	0/0:33,0:33:39.13:0,39,594	0/1:14,0:13:29.76:30,0,38	0/0:13,0:13:21.07:0,21,308
chr10	104691719	.	A	ATGGA	6024.56	PASS	AB=1.000;AC=25;AF=0.521;AN=48;BaseQRankSum=-7.358;DP=806;FS=7.255;HRun=0;HaplotypeScore=184.9965;InbreedingCoeff=0.6208;MQ=64.84;MQ0=6;MQRankSum=3.242;QD=13.21;ReadPosRankSum=0.598;VQSLOD=3.9781;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:51,0:51:21.07:489,21,0	0/0:12,0:12:2.98:0,3,22	./.	./.	1/1:34,0:33:24.08:557,24,0	0/0:20,0:20:6.02:0,6,70	0/0:17,0:17:0.89:0,1,2	./.	1/1:28,0:28:18.06:419,18,0	0/0:40,0:38:30.09:0,30,437	0/0:22,0:22:21.05:0,21,293	1/1:37,0:37:26.40:622,26,0	1/1:8,7:16:6.02:125,6,0	1/1:30,0:30:18.06:418,18,0	1/1:50,0:50:27.09:628,27,0	0/0:30,0:30:45.15:0,45,685	0/1:49,0:49:55.45:662,0,55	0/1:31,0:31:4.21:406,0,4	1/1:23,0:21:2.96:19,3,0	./.	0/0:32,0:32:5.96:0,6,67	1/1:28,0:28:26.82:578,27,0	1/1:30,0:30:25.47:581,25,0	1/1:35,0:35:22.32:491,22,0	0/0:16,0:16:9.02:0,9,97	0/0:32,0:32:39.13:0,39,594	0/1:14,0:13:29.76:30,0,38	0/0:13,0:13:21.07:0,21,308
chr10	104692632	.	G	GCCC	1460.03	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=1.077;DP=607;FS=26.837;HRun=7;HaplotypeScore=92.6575;InbreedingCoeff=0.9598;MQ=86.50;MQ0=0;MQRankSum=-2.589;QD=15.21;ReadPosRankSum=-2.531;VQSLOD=-0.7256;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,1691	1/1:0,2:2:6.02:124,6,0	0/0:21,0:21:42.02:0,42,537	0/0:23,0:22:37.55:0,38,416	0/0:18,0:18:51.16:0,51,690	0/0:20,0:20:57.15:0,57,777	0/0:29,0:30:84.21:0,84,1115	1/1:7,6:14:14.99:231,15,0	0/0:26,0:27:67.61:0,68,917	0/0:27,0:27:78.20:0,78,1010	0/0:12,0:12:36.11:0,36,472	0/0:36,0:36:99:0,99,1312	0/0:20,0:20:51.13:0,51,678	0/0:24,0:24:60.09:0,60,744	0/0:27,0:27:78.19:0,78,1023	0/0:22,0:22:51.07:0,51,643	0/0:26,0:26:69.19:0,69,922	0/0:26,0:26:75.23:0,75,1005	1/1:11,0:14:26.97:293,27,0	1/1:2,8:10:9.50:186,10,0	1/1:8,27:36:17.92:287,18,0	0/0:22,0:22:60.15:0,60,793	0/0:7,0:7:21.07:0,21,284	0/0:33,0:33:90.28:0,90,1225	0/0:9,0:9:24.07:0,24,327	0/0:28,0:28:69.20:0,69,926	1/1:4,14:20:26.64:518,27,0	0/0:8,0:8:20.98:0,21,255
chr10	104693265	.	AGAG	A	5439.07	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.577;DP=641;FS=5.243;HRun=0;HaplotypeScore=101.7675;InbreedingCoeff=0.9668;MQ=71.32;MQ0=2;MQRankSum=-1.623;QD=28.63;ReadPosRankSum=-0.152;VQSLOD=4.7920;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,120,2419	1/1:4,6:10:18.06:263,18,0	0/0:33,0:25:12.84:0,13,659	0/0:35,0:31:48.56:0,49,768	0/0:21,0:21:51.18:0,51,1046	1/1:1,15:16:33.11:483,33,0	1/1:5,25:30:57.19:833,57,0	1/1:6,24:26:61.35:816,61,0	0/0:25,1:26:28.38:0,28,1352	0/0:21,0:21:51.13:0,51,940	0/0:12,0:12:27.09:0,27,557	0/0:17,0:17:39.13:0,39,804	0/0:20,0:20:51.16:0,51,990	0/0:16,0:16:36.12:0,36,742	0/0:22,0:22:60.21:0,60,1238	0/0:38,0:38:87.29:0,87,1736	0/0:18,0:18:42.14:0,42,862	0/0:21,0:21:42.14:0,42,865	1/1:8,10:18:27.04:324,27,0	1/1:2,12:14:33.11:482,33,0	1/1:6,26:32:69.23:1010,69,0	0/0:23,0:23:45.15:0,45,891	0/0:16,0:16:36.12:0,36,727	0/0:30,0:30:66.23:0,66,1340	1/1:4,13:17:30.10:439,30,0	0/0:26,1:27:25.33:0,25,1258	1/1:3,20:23:54.18:790,54,0	0/0:1,0:1:3.01:0,3,62
chr10	104693739	.	A	ACCAGGGGGCTTTT	15707.97	PASS	AB=0.833;AC=55;AF=0.982;AN=56;BaseQRankSum=0.668;DP=214;FS=22.111;HRun=0;HaplotypeScore=247.9986;InbreedingCoeff=-0.0528;MQ=63.03;MQ0=0;MQRankSum=-2.334;QD=73.40;ReadPosRankSum=1.328;VQSLOD=2.9920;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:24.06:883,24,0	1/1:7,0:8:15.94:531,16,0	1/1:2,1:5:5.22:593,5,0	0/1:4,0:5:17.43:265,0,17	1/1:14,0:15:32.70:1164,33,0	1/1:4,0:4:12.04:566,12,0	1/1:9,0:9:23.11:839,23,0	1/1:15,0:15:39.12:1085,39,0	1/1:9,0:9:21.05:881,21,0	1/1:7,0:7:6.91:229,7,0	1/1:6,0:6:9.03:291,9,0	1/1:6,0:6:5.99:159,6,0	1/1:12,0:13:24.05:923,24,0	1/1:5,0:5:12.04:497,12,0	1/1:5,0:6:9.03:325,9,0	1/1:3,0:4:6.02:257,6,0	1/1:9,0:9:12.04:416,12,0	1/1:6,0:6:12.04:523,12,0	1/1:7,0:7:15.02:314,15,0	1/1:9,0:10:24.08:948,24,0	1/1:7,0:7:18.01:510,18,0	1/1:8,0:8:12.04:387,12,0	1/1:6,0:6:9.03:378,9,0	1/1:5,0:5:12:266,12,0	1/1:10,0:11:23.97:954,24,0	1/1:4,0:4:9.03:433,9,0	1/1:10,0:10:18.06:874,18,0	1/1:3,0:3:9.03:217,9,0
chr10	104693740	.	C	CCAGGGGGCTTGGCTTAGCTACAAGAT	1938.72	PASS	AB=0.657;AC=28;AF=0.933;AN=30;BaseQRankSum=-2.648;DP=37;FS=8.468;HRun=0;HaplotypeScore=30.3596;InbreedingCoeff=-0.1605;MQ=124.28;MQ0=0;MQRankSum=-2.006;QD=58.75;ReadPosRankSum=-0.642;VQSLOD=0.4045;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:2.99:23,3,0	1/1:2,0:2:3.48:82,3,0	0/1:1,1:3:24.74:600,0,25	0/1:3,0:5:21.23:400,0,21	1/1:1,0:1:3.01:90,3,0	./.	./.	1/1:6,0:6:12.03:164,12,0	1/1:1,0:1:2.99:24,3,0	1/1:1,0:1:0.89:2,1,0	./.	./.	1/1:3,0:3:5.99:71,6,0	./.	1/1:1,0:1:3.01:118,3,0	1/1:2,0:2:3.01:122,3,0	./.	./.	1/1:3,0:3:5.99:49,6,0	1/1:1,0:1:3.01:134,3,0	1/1:1,0:1:2.99:24,3,0	./.	./.	./.	1/1:1,0:1:3.01:124,3,0	./.	./.	./.
chr10	104695105	.	CAA	C	848.91	PASS	AB=0.514;AC=9;AF=0.161;AN=56;BaseQRankSum=0.988;DP=467;FS=4.196;HRun=2;HaplotypeScore=64.2794;InbreedingCoeff=0.8059;MQ=72.19;MQ0=25;MQRankSum=1.058;QD=10.23;ReadPosRankSum=-3.495;VQSLOD=-0.5787;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:35.98:0,36,372	0/0:7,0:7:20.91:0,21,161	0/0:40,0:18:24.36:0,24,286	0/0:57,0:20:25.41:0,25,311	0/0:12,0:12:29.84:0,30,227	0/0:13,0:13:34.93:0,35,352	0/0:23,0:23:55.18:0,55,597	1/1:22,0:22:59.76:447,60,0	0/0:15,0:15:41.34:0,41,339	0/0:10,0:10:26.96:0,27,260	0/0:7,0:7:14.95:0,15,130	0/0:13,0:13:27.31:0,27,253	0/0:14,0:14:37.98:0,38,309	0/0:18,0:17:25.49:0,25,298	0/0:18,0:17:20.34:0,20,224	0/0:15,0:14:41.97:0,42,357	0/0:22,0:22:41.31:0,41,418	0/0:9,0:9:23.99:0,24,221	1/1:4,9:13:38.23:246,38,0	1/1:15,0:14:26.68:178,27,0	1/1:1,14:14:3.01:47,3,0	0/0:14,0:13:29.78:0,30,226	0/0:7,0:7:18.17:0,18,125	0/0:17,0:17:35.37:0,35,322	0/0:6,0:6:17.78:0,18,165	0/0:12,0:12:35.94:0,36,311	0/1:1,17:18:29:88,0,29	0/0:12,0:12:35.55:0,36,344
chr10	104695106	.	AAG	A	428.66	PASS	AB=0.990;AC=18;AF=0.500;AN=36;BaseQRankSum=1.330;DP=486;FS=8.105;HRun=0;HaplotypeScore=67.3513;InbreedingCoeff=0.2456;MQ=70.64;MQ0=25;MQRankSum=1.154;QD=2.23;ReadPosRankSum=1.660;VQSLOD=0.7084;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:21:6.02:63,6,0	./.	./.	./.	./.	0/0:14,0:14:14.68:0,15,124	0/1:21,1:23:13.85:14,0,161	./.	./.	0/0:11,0:11:5.98:0,6,47	0/0:6,0:6:2.84:0,3,14	1/1:10,2:13:5.85:46,6,0	./.	1/1:14,2:16:8.86:78,9,0	1/1:12,6:18:8.86:78,9,0	./.	1/1:20,1:22:11.86:109,12,0	0/1:11,0:11:12.51:16,0,13	0/0:12,0:12:0:0,0,0	./.	0/1:18,0:17:18.93:21,0,19	./.	1/1:8,0:8:2.84:24,3,0	1/1:18,1:19:6.40:71,6,0	0/0:6,0:6:3.01:0,3,37	0/0:17,0:16:2.49:0,2,6	0/1:18,0:18:9.64:38,0,10	0/0:12,0:12:6.02:0,6,74
chr10	104695630	.	G	GTTGT	2715.84	PASS	AB=0.848;AC=13;AF=0.232;AN=56;BaseQRankSum=-2.093;DP=561;FS=0.424;HRun=0;HaplotypeScore=114.7255;InbreedingCoeff=0.7034;MQ=64.34;MQ0=9;MQRankSum=0.287;QD=16.26;ReadPosRankSum=-2.250;VQSLOD=2.7273;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:62.42:0,62,807	1/1:8,0:8:13.55:158,14,0	0/0:18,0:12:32.89:0,33,291	0/0:21,0:17:38:0,38,379	0/0:14,0:14:30.05:0,30,435	0/1:22,0:21:69.98:70,0,158	0/0:9,0:16:17.78:0,18,147	1/1:33,0:33:97.33:960,97,0	0/0:19,0:20:53.51:0,54,714	0/0:25,0:24:72.02:0,72,871	0/0:13,0:13:27.48:0,27,379	0/0:18,0:17:48.03:0,48,673	0/0:13,0:13:35.94:0,36,380	0/0:13,0:13:36.05:0,36,524	0/0:22,0:21:48.07:0,48,682	0/0:15,0:16:41.88:0,42,691	0/0:33,0:33:89.97:0,90,1148	0/0:22,0:20:60.01:0,60,768	1/1:2,12:15:38.99:592,39,0	1/1:6,13:22:36.25:485,36,0	0/1:6,18:34:9.93:47,0,10	0/0:13,0:13:36:0,36,514	0/0:27,0:27:55.33:0,55,633	0/0:31,0:30:80.74:0,81,1211	0/1:16,0:16:99:102,0,144	0/0:18,0:18:42.03:0,42,584	1/1:14,0:14:38.93:486,39,0	0/0:13,0:12:33.08:0,33,673
chr10	104695645	.	G	GTGTGTG	689.63	PASS	AB=1.000;AC=12;AF=0.231;AN=52;BaseQRankSum=3.932;DP=573;FS=0.681;HRun=0;HaplotypeScore=142.6103;InbreedingCoeff=0.5187;MQ=52.90;MQ0=33;MQRankSum=-2.110;QD=3.94;ReadPosRankSum=-1.893;VQSLOD=2.2903;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:31.87:0,32,516	0/0:6,0:6:3.01:0,3,42	./.	./.	0/0:14,0:14:17.51:0,18,301	1/1:17,7:24:8.71:129,9,0	0/0:19,0:17:0.50:0,1,1	1/1:37,0:37:13.11:92,13,0	0/0:20,0:19:26.24:0,26,444	0/0:22,0:21:23.89:0,24,450	0/0:17,0:15:18.51:0,19,278	0/0:20,0:19:24.06:0,24,414	0/1:11,0:9:3.09:3,0,123	0/0:12,0:11:23.52:0,24,422	0/0:19,0:17:26.96:0,27,402	0/0:18,0:18:22.27:0,22,541	0/0:35,0:33:51.02:0,51,782	0/0:23,0:20:35.44:0,35,489	1/1:17,0:14:7.63:120,8,0	1/1:24,0:22:12.02:122,12,0	0/1:30,0:27:25.27:25,0,68	0/0:22,0:22:23.73:0,24,348	0/0:23,0:23:20.13:0,20,300	0/0:31,0:29:27.97:0,28,791	0/1:18,0:18:40.04:314,0,40	0/0:20,0:18:1.58:0,2,351	0/1:13,0:13:1.79:39,0,2	0/0:20,0:16:33.08:0,33,647
chr10	104695678	.	T	TGA	828.81	PASS	AB=0.935;AC=14;AF=0.250;AN=56;BaseQRankSum=1.887;DP=533;FS=4.649;HRun=0;HaplotypeScore=102.7250;InbreedingCoeff=0.2030;MQ=50.49;MQ0=38;MQRankSum=-0.677;QD=3.98;ReadPosRankSum=-2.947;VQSLOD=1.8710;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:41.88:0,42,394	1/1:8,0:8:14.92:117,15,0	0/0:1,0:1:3:0,3,28	0/0:5,0:2:2.84:0,3,14	0/1:13,0:14:11.22:11,0,53	0/1:20,1:22:52.16:92,0,52	0/1:21,0:18:37.12:140,0,37	1/1:23,0:20:3:25,3,0	0/0:18,0:17:24:0,24,245	0/0:19,0:17:30.06:0,30,316	0/0:17,0:15:18.05:0,18,201	0/0:19,0:17:27.03:0,27,277	0/0:13,0:11:19.08:0,19,208	0/0:14,0:13:15.03:0,15,159	0/0:17,0:17:29.76:0,30,268	0/0:13,0:15:23.84:0,24,218	0/0:27,0:25:38.02:0,38,344	0/0:23,0:20:31.94:0,32,293	1/1:14,0:13:6:55,6,0	0/1:23,0:21:5.44:77,0,5	0/1:20,0:20:12.89:40,0,13	0/0:21,0:20:44.81:0,45,437	0/0:30,0:30:44.64:0,45,396	0/0:31,0:29:46.90:0,47,449	0/1:23,0:22:5.25:369,0,5	0/0:21,0:19:32.54:0,33,277	0/1:3,8:12:24.68:55,0,25	0/1:26,0:22:6.99:7,0,259
chr10	104696553	.	GA	G	662.38	PASS	AB=0.868;AC=23;AF=0.426;AN=54;BaseQRankSum=8.673;DP=609;FS=1.946;HRun=15;HaplotypeScore=94.3590;InbreedingCoeff=0.4510;MQ=72.58;MQ0=3;MQRankSum=-3.699;QD=2.28;ReadPosRankSum=3.648;VQSLOD=-0.1105;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,4:44:9.39:0,9,611	./.	0/0:58,0:31:31.53:0,32,317	0/1:33,0:17:1.27:1,0,103	0/0:20,3:23:0.35:0,0,232	1/1:5,12:20:33.02:194,33,0	1/1:7,9:17:30.75:186,31,0	1/1:11,0:20:18.51:59,19,0	0/0:14,5:19:3.89:0,4,219	0/1:17,3:21:5.54:6,0,200	0/1:8,2:10:20.52:21,0,79	0/0:14,0:14:28.18:0,28,216	0/1:13,1:15:2.27:2,0,120	0/0:18,0:19:32.01:0,32,288	0/1:16,3:20:0.44:0,0,254	0/0:19,1:20:1.72:0,2,236	0/0:26,7:34:5.42:0,5,302	0/0:21,2:25:5.93:0,6,277	1/1:5,0:11:10.89:31,11,0	1/1:9,1:19:19.09:66,19,0	1/1:6,0:14:5.88:18,6,0	0/1:13,2:15:3.27:3,0,93	0/0:24,3:28:22.96:0,23,319	0/1:30,10:42:34.43:34,0,403	1/1:0,12:14:24.77:146,25,0	0/0:15,0:15:20.98:0,21,178	1/1:6,0:19:24.63:74,25,0	0/0:15,0:18:23.66:0,24,182
chr10	104696774	.	T	TAGAA	2028.36	PASS	AB=0.916;AC=26;AF=0.542;AN=48;BaseQRankSum=2.554;DP=523;FS=7.826;HRun=0;HaplotypeScore=103.9095;InbreedingCoeff=0.5172;MQ=64.42;MQ0=4;MQRankSum=-3.440;QD=6.52;ReadPosRankSum=-2.997;VQSLOD=0.2093;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,6:23:14.54:128,0,15	./.	./.	./.	0/0:16,0:16:6.02:0,6,89	1/1:20,0:20:16.38:154,16,0	1/1:14,0:14:8.88:61,9,0	./.	0/0:19,0:19:27.09:0,27,397	0/0:27,0:27:24.08:0,24,354	1/1:19,4:24:21.39:255,21,0	0/0:17,0:17:9.02:0,9,114	0/1:18,1:18:38.21:60,0,38	1/1:15,1:16:6.02:121,6,0	0/0:21,0:21:18.04:0,18,243	0/0:19,0:19:12.04:0,12,176	1/1:17,12:29:18.04:366,18,0	1/1:14,5:19:12.03:208,12,0	1/1:26,0:25:3.28:9,3,0	1/1:19,0:19:0.47:1,0,0	1/1:13,0:13:5.60:38,6,0	0/1:18,1:20:35.37:79,0,35	0/0:19,0:19:21.06:0,21,291	1/1:20,4:24:24.01:497,24,0	0/1:22,0:21:5.38:183,0,5	0/0:16,0:16:15.04:0,15,198	1/1:21,0:21:7.18:44,7,0	0/0:9,0:9:5.99:0,6,49
chr10	104696845	.	AG	A	487.92	PASS	AB=0.892;AC=9;AF=0.167;AN=54;BaseQRankSum=10.821;DP=617;FS=0.000;HRun=1;HaplotypeScore=90.5047;InbreedingCoeff=0.4776;MQ=50.69;MQ0=24;MQRankSum=-9.245;QD=4.56;ReadPosRankSum=-1.853;VQSLOD=-0.5223;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:16:31.32:0,31,610	0/0:5,2:5:0.24:0,0,14	0/0:60,0:12:10.38:0,10,342	0/0:58,1:10:22.92:0,23,272	0/0:26,0:26:78.27:0,78,1235	0/1:19,1:20:37.94:38,0,501	0/1:11,1:11:1.89:2,0,146	0/0:9,0:9:5.90:0,6,187	0/0:23,0:23:69.23:0,69,1082	0/0:29,0:29:87.30:0,87,1389	0/0:21,0:21:42.51:0,43,823	0/0:19,0:19:57.18:0,57,888	0/0:16,0:15:36.10:0,36,531	0/0:10,0:10:27.08:0,27,401	0/0:25,0:25:72.25:0,72,1148	0/0:23,0:23:69.23:0,69,1091	0/0:29,0:29:68.83:0,69,1019	0/0:19,0:19:1.78:0,2,599	1/1:6,2:8:4.84:75,5,0	1/1:5,7:11:11.71:81,12,0	./.	0/0:15,0:15:42.12:0,42,625	0/0:26,0:25:75.26:0,75,1198	0/0:28,3:30:26.74:0,27,916	0/1:27,9:32:93.92:94,0,644	0/0:31,0:31:93.30:0,93,1410	1/1:5,14:19:31.46:339,31,0	0/0:13,0:13:39.13:0,39,623
chr10	104696847	.	AAGG	A	602.22	PASS	AB=0.971;AC=9;AF=0.167;AN=54;BaseQRankSum=9.885;DP=617;FS=2.201;HRun=0;HaplotypeScore=109.2255;InbreedingCoeff=0.5900;MQ=50.76;MQ0=24;MQRankSum=-8.905;QD=7.72;ReadPosRankSum=-0.987;VQSLOD=2.6878;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:16:48.14:0,48,1008	0/0:6,1:5:1.29:0,1,20	0/0:61,0:12:32.52:0,33,499	0/0:60,0:10:22.88:0,23,378	0/0:26,0:26:78.25:0,78,1747	0/1:19,2:21:40.26:40,0,821	0/1:11,0:10:3.05:3,0,195	0/1:8,0:8:5.34:5,0,110	0/0:24,0:24:69.21:0,69,1482	0/0:29,0:29:87.26:0,87,1937	0/0:20,0:20:54.18:0,54,1177	0/0:19,0:19:57.17:0,57,1215	0/0:16,0:15:36.12:0,36,813	0/0:11,0:11:30.10:0,30,670	0/0:25,0:25:72.25:0,72,1625	0/0:24,0:24:72.23:0,72,1597	0/0:27,0:27:69.24:0,69,1551	0/0:19,0:19:34.50:0,35,959	1/1:5,2:7:11.06:113,11,0	1/1:6,6:11:12:116,12,0	./.	0/0:15,0:15:42.13:0,42,912	0/0:27,0:26:78.24:0,78,1700	0/0:30,0:30:52.95:0,53,1487	0/0:31,5:32:30.84:0,31,1050	0/0:30,0:30:90.31:0,90,2055	1/1:6,13:19:44.76:469,45,0	0/0:13,0:13:39.13:0,39,899
chr10	104696848	.	AGG	A	812.02	PASS	AB=0.905;AC=10;AF=0.185;AN=54;BaseQRankSum=9.974;DP=611;FS=5.164;HRun=2;HaplotypeScore=97.4802;InbreedingCoeff=0.6647;MQ=50.80;MQ0=24;MQRankSum=-9.725;QD=8.20;ReadPosRankSum=-1.153;VQSLOD=0.0940;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:16:48.16:0,48,939	1/1:3,3:5:5.95:62,6,0	0/0:63,0:12:31.88:0,32,473	0/0:59,0:10:16.69:0,17,289	0/0:26,0:26:78.26:0,78,1549	0/1:18,2:20:38.32:38,0,739	0/0:11,0:10:11.83:0,12,189	0/0:6,0:6:1.99:0,2,12	0/0:25,0:25:72.22:0,72,1370	0/0:29,0:29:87.27:0,87,1722	0/0:19,0:19:54.18:0,54,1047	0/0:19,0:19:57.17:0,57,1115	0/0:16,0:15:36.12:0,36,700	0/0:11,0:11:30.10:0,30,609	0/0:24,0:24:72.25:0,72,1460	0/0:24,0:24:72.25:0,72,1457	0/0:27,0:27:69.24:0,69,1357	0/0:18,0:18:34.52:0,35,838	1/1:3,2:5:12.04:148,12,0	1/1:9,2:11:12.03:140,12,0	./.	0/0:15,0:15:42.14:0,42,814	0/0:27,0:26:78.26:0,78,1546	0/0:30,0:30:75.58:0,76,1373	0/1:32,4:32:41.61:42,0,884	0/0:30,0:30:90.31:0,90,1829	1/1:15,3:19:28.99:538,29,0	0/0:13,0:13:39.13:0,39,792
chr10	104696860	.	G	GAA	758.90	PASS	AB=0.868;AC=9;AF=0.161;AN=56;BaseQRankSum=9.729;DP=622;FS=1.328;HRun=3;HaplotypeScore=100.1873;InbreedingCoeff=0.3525;MQ=50.96;MQ0=22;MQRankSum=-9.264;QD=5.38;ReadPosRankSum=-1.434;VQSLOD=-0.5244;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.15:0,45,684	1/1:6,1:5:5.88:42,6,0	0/0:61,0:13:32.52:0,33,410	0/1:64,0:12:15.45:15,0,275	0/0:30,0:30:90.27:0,90,1333	0/1:22,0:22:26.97:27,0,630	0/0:14,0:13:21.53:0,22,300	0/1:1,0:2:3.10:13,0,3	0/0:23,0:23:66.14:0,66,951	0/0:31,0:31:90.29:0,90,1320	0/0:18,0:18:54:0,54,747	0/0:20,0:20:60.20:0,60,918	0/0:18,0:18:45.15:0,45,688	0/0:13,0:13:33.11:0,33,500	0/0:23,0:23:69.23:0,69,1056	0/0:24,0:24:72.24:0,72,1098	0/0:27,0:27:72.09:0,72,991	0/0:16,0:18:25.96:0,26,622	0/1:2,2:5:19.98:20,0,34	1/1:13,3:15:23.32:254,23,0	0/0:2,0:2:4.31:0,4,13	0/0:14,0:14:42.14:0,42,642	0/0:26,0:26:69.20:0,69,1008	0/0:23,0:22:39.34:0,39,808	0/0:37,0:33:11.47:0,11,800	0/0:28,0:28:81.27:0,81,1238	0/1:23,1:24:12.55:533,0,13	0/0:14,0:14:42.14:0,42,643
chr10	104696861	.	AG	A	363.02	PASS	AB=0.719;AC=6;AF=0.107;AN=56;BaseQRankSum=9.720;DP=615;FS=0.646;HRun=1;HaplotypeScore=85.8871;InbreedingCoeff=0.5129;MQ=51.32;MQ0=22;MQRankSum=-8.517;QD=7.12;ReadPosRankSum=-1.211;VQSLOD=0.1851;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.15:0,45,719	1/1:3,4:5:5.84:42,6,0	0/0:60,0:12:32.59:0,33,448	0/0:62,2:11:22.70:0,23,309	0/0:30,0:30:90.29:0,90,1415	0/0:19,2:21:11.89:0,12,654	0/0:17,0:16:24.53:0,25,338	0/0:2,0:2:4.94:0,5,22	0/0:23,0:23:69.15:0,69,1027	0/0:30,0:30:90.29:0,90,1381	0/0:18,0:18:54.01:0,54,800	0/0:20,0:20:60.20:0,60,959	0/0:18,0:18:45.15:0,45,719	0/0:13,0:13:36.12:0,36,562	0/0:23,0:23:69.24:0,69,1103	0/0:24,0:24:72.25:0,72,1151	0/0:26,0:26:57.22:0,57,1083	0/0:18,0:18:26.57:0,27,649	0/1:4,1:5:24.93:35,0,25	1/1:7,9:15:22.54:138,23,0	0/0:2,0:2:5.20:0,5,29	0/0:14,0:14:42.14:0,42,671	0/0:25,0:25:72.21:0,72,1100	0/0:21,0:20:57.18:0,57,886	0/0:29,6:32:46.12:0,46,880	0/0:29,0:29:87.29:0,87,1358	0/1:8,15:23:20.08:276,0,20	0/0:14,0:14:42.14:0,42,671
chr10	104696863	.	AAGG	A	185.74	PASS	AB=0.864;AC=5;AF=0.089;AN=56;BaseQRankSum=8.799;DP=614;FS=5.084;HRun=0;HaplotypeScore=105.2941;InbreedingCoeff=0.2388;MQ=51.56;MQ0=21;MQRankSum=-7.637;QD=3.71;ReadPosRankSum=0.103;VQSLOD=1.3184;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.17:0,51,1103	1/1:3,4:5:5.50:45,6,0	0/0:59,0:13:30.08:0,30,545	0/0:63,0:13:26.58:0,27,502	0/0:32,0:32:96.30:0,96,2085	0/0:20,1:21:0.14:0,0,922	0/0:16,0:15:22.63:0,23,462	0/0:2,0:2:2.13:0,2,16	0/0:22,0:22:60.19:0,60,1319	0/0:27,0:27:81.27:0,81,1803	0/0:19,0:19:51.17:0,51,1107	0/0:20,0:20:60.21:0,60,1376	0/0:18,0:18:45.15:0,45,1008	0/0:15,0:15:39.10:0,39,750	0/0:23,0:23:69.24:0,69,1551	0/0:24,0:24:72.25:0,72,1623	0/0:25,0:25:66.23:0,66,1427	0/0:18,0:18:19.83:0,20,802	0/1:4,1:5:10.96:43,0,11	0/1:13,3:15:13.11:57,0,13	0/0:2,0:2:3.22:0,3,13	0/0:14,0:14:42.14:0,42,934	0/0:23,0:23:66.23:0,66,1482	0/0:22,0:21:60.21:0,60,1336	0/0:36,1:34:31.94:0,32,1080	0/0:30,0:30:87.30:0,87,1924	0/1:20,2:22:11.52:154,0,12	0/0:14,0:14:42.14:0,42,932
chr10	104696864	.	AG	A	178.78	PASS	AB=0.700;AC=5;AF=0.089;AN=56;BaseQRankSum=9.514;DP=613;FS=0.000;HRun=2;HaplotypeScore=86.1052;InbreedingCoeff=0.6914;MQ=51.69;MQ0=21;MQRankSum=-8.228;QD=3.97;ReadPosRankSum=-0.484;VQSLOD=0.0702;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.15:0,54,772	0/1:4,0:5:3.10:3,0,5	0/0:57,1:13:30.09:0,30,426	0/0:63,1:14:31.74:0,32,423	0/0:33,0:33:99:0,99,1415	0/0:21,0:21:45.01:0,45,658	0/0:16,0:15:18.24:0,18,309	0/0:1,0:2:0.87:0,1,7	0/0:21,0:21:60.19:0,60,878	0/0:27,0:27:81.27:0,81,1210	0/0:19,0:19:51.17:0,51,761	0/0:20,0:20:60.20:0,60,899	0/0:18,0:18:45.15:0,45,674	0/0:14,0:14:39.10:0,39,526	0/0:23,0:23:69.23:0,69,1034	0/0:24,0:24:72.24:0,72,1079	0/0:25,0:25:66.20:0,66,966	0/0:18,0:18:36.32:0,36,559	0/0:4,0:5:1.49:0,1,29	1/1:5,6:15:17.14:87,17,0	0/0:2,0:2:5.09:0,5,19	0/0:14,0:14:42.14:0,42,628	0/0:23,0:23:66.22:0,66,988	0/0:22,0:21:60.20:0,60,898	0/0:37,0:34:58.44:0,58,766	0/0:30,0:30:87.29:0,87,1303	1/1:5,13:22:14.76:205,15,0	0/0:14,0:14:42.14:0,42,629
chr10	104696890	.	G	GAGAA	883.68	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-0.180;DP=550;FS=0.000;HRun=0;HaplotypeScore=103.5260;InbreedingCoeff=0.7299;MQ=54.74;MQ0=3;MQRankSum=-1.999;QD=8.50;ReadPosRankSum=1.645;VQSLOD=2.4422;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.57:0,61,900	1/1:5,0:4:0.21:3,0,0	0/0:17,0:5:12.04:0,12,198	0/0:23,0:13:23.34:0,23,408	0/0:37,0:37:84.25:0,84,1391	1/1:4,13:18:14.71:326,15,0	1/1:4,16:20:1.81:293,2,0	0/1:16,0:16:6.51:44,0,7	0/0:19,0:19:48.15:0,48,794	0/0:27,0:27:75.22:0,75,1174	0/0:18,0:18:51.17:0,51,864	0/0:23,0:23:60.18:0,60,957	0/0:17,0:17:45.15:0,45,761	0/0:11,0:11:27.09:0,27,460	0/0:26,0:26:66.13:0,66,941	0/0:22,0:22:60.18:0,60,979	0/0:27,0:27:56.59:0,57,910	0/0:12,0:12:33.10:0,33,529	1/1:7,0:7:0.47:1,0,0	0/0:15,0:15:11.48:0,11,67	1/1:5,0:5:5.15:14,5,0	0/0:17,0:17:45.15:0,45,724	0/0:26,0:26:59:0,59,946	0/0:24,0:24:51.12:0,51,764	1/1:11,21:29:15.05:346,15,0	0/0:29,0:29:78.18:0,78,1190	0/0:21,0:21:34.13:0,34,272	0/0:11,0:11:21.05:0,21,314
chr10	104696959	.	GGAA	G	389.63	PASS	AB=0.855;AC=6;AF=0.107;AN=56;BaseQRankSum=7.172;DP=454;FS=8.045;HRun=0;HaplotypeScore=83.6156;InbreedingCoeff=0.3883;MQ=64.70;MQ0=0;MQRankSum=-6.212;QD=10.25;ReadPosRankSum=-0.775;VQSLOD=1.7546;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57:0,57,1218	0/0:2,0:2:5.85:0,6,66	0/0:22,0:20:47.07:0,47,891	0/0:12,0:11:27.09:0,27,588	0/0:23,0:23:63.19:0,63,1260	0/0:17,0:17:23.93:0,24,493	0/0:21,0:21:57.11:0,57,1194	0/1:8,0:8:0.09:76,0,0	0/0:19,0:19:54.19:0,54,1209	0/0:33,0:33:96.31:0,96,2055	0/0:15,0:15:45.15:0,45,1015	0/0:14,0:14:42.14:0,42,889	0/0:16,0:16:45.15:0,45,984	0/0:5,0:5:12:0,12,183	0/0:33,0:33:99:0,99,2205	0/0:19,0:19:57.20:0,57,1292	0/0:20,0:20:54.19:0,54,1157	0/0:16,0:16:45.15:0,45,1001	1/1:5,1:6:7.66:155,8,0	0/1:6,5:11:11.12:215,0,11	0/1:5,1:6:14.37:14,0,16	0/0:17,0:17:48.16:0,48,1056	0/0:21,0:21:60.21:0,60,1351	0/0:26,0:26:72.15:0,72,1518	0/0:13,0:13:18.06:0,18,408	0/0:17,0:17:48.16:0,48,1044	0/1:6,1:7:7.98:52,0,8	0/0:13,0:13:39.13:0,39,850
chr10	104696971	.	GGAAGT	G	363.24	PASS	AB=0.923;AC=8;AF=0.143;AN=56;BaseQRankSum=7.532;DP=453;FS=1.937;HRun=0;HaplotypeScore=97.9933;InbreedingCoeff=0.3228;MQ=64.00;MQ0=0;MQRankSum=-6.917;QD=12.11;ReadPosRankSum=2.423;VQSLOD=2.9019;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.02:0,69,1944	0/1:2,0:2:19.86:20,0,27	0/0:17,0:15:42.14:0,42,1203	0/0:14,0:13:35.61:0,36,862	0/0:18,0:18:54.13:0,54,1567	0/0:16,0:16:33.11:0,33,1017	0/0:19,0:19:57.15:0,57,1769	0/1:2,0:2:13.09:13,0,17	0/0:20,0:20:60.21:0,60,1915	0/0:34,0:34:99:0,102,3256	0/0:17,0:17:51.18:0,51,1556	0/0:16,0:16:48.16:0,48,1255	0/0:19,0:19:54.19:0,54,1629	0/0:6,0:6:18.06:0,18,493	0/0:33,0:33:99:0,99,3183	0/0:20,0:20:60.21:0,60,1957	0/0:20,0:20:60.19:0,60,1784	0/0:22,0:22:63.22:0,63,1886	0/1:4,1:5:25.98:93,0,26	1/1:6,5:11:20.48:251,20,0	1/1:3,1:4:0.79:26,1,0	0/0:17,0:17:51.18:0,51,1575	0/0:23,0:23:69.24:0,69,2171	0/0:25,0:25:45.13:0,45,2211	0/0:9,0:9:18.06:0,18,599	0/0:18,0:18:54.19:0,54,1594	0/1:5,1:6:31.08:96,0,31	0/0:15,0:15:45.15:0,45,1409
chr10	104696973	.	AAGTAT	A	773.48	PASS	AB=0.875;AC=10;AF=0.179;AN=56;BaseQRankSum=7.850;DP=455;FS=4.096;HRun=0;HaplotypeScore=98.1970;InbreedingCoeff=0.6083;MQ=63.85;MQ0=0;MQRankSum=-7.247;QD=24.95;ReadPosRankSum=1.734;VQSLOD=3.3639;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:62.98:0,63,1821	1/1:1,1:2:3.01:63,3,0	0/0:18,0:16:44.74:0,45,1185	0/0:13,0:13:19.62:0,20,895	0/0:17,0:17:48.16:0,48,1469	0/0:16,0:16:33.11:0,33,1031	0/0:19,0:19:57.18:0,57,1603	0/1:2,0:2:21.91:54,0,22	0/0:22,0:22:63.22:0,63,1933	0/0:34,0:34:99:0,99,2963	0/0:17,0:17:48.16:0,48,1410	0/0:16,0:16:42.14:0,42,1251	0/0:19,0:19:48.16:0,48,1422	0/0:6,0:6:18.06:0,18,564	0/0:32,0:32:93.32:0,93,2854	0/0:20,0:20:60.21:0,60,1820	0/0:19,0:19:54.16:0,54,1607	0/0:24,0:24:69.20:0,69,1975	0/1:4,2:6:27.89:158,0,28	1/1:10,1:11:10.28:407,10,0	1/1:3,1:4:1.31:72,1,0	0/0:17,0:17:51.15:0,51,1327	0/0:24,0:24:72.25:0,72,2157	0/0:25,0:25:42.53:0,43,2027	0/0:9,0:9:21.07:0,21,644	0/0:17,0:17:48.11:0,48,1402	1/1:6,0:6:9.03:163,9,0	0/0:16,0:16:48.16:0,48,1477
chr10	104696977	.	AT	A	341.54	PASS	AB=0.831;AC=8;AF=0.143;AN=56;BaseQRankSum=7.600;DP=459;FS=1.834;HRun=1;HaplotypeScore=62.6168;InbreedingCoeff=0.3555;MQ=63.57;MQ0=1;MQRankSum=-6.640;QD=10.35;ReadPosRankSum=1.163;VQSLOD=1.6049;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:65.95:0,66,1008	1/1:2,0:2:3.48:39,3,0	0/0:19,0:16:36.17:0,36,697	0/0:14,0:15:36.59:0,37,565	0/0:20,0:20:60.18:0,60,907	0/0:17,0:17:33.11:0,33,524	0/0:20,0:20:60.19:0,60,925	0/1:1,1:2:35.22:35,0,39	0/0:22,0:22:66.23:0,66,1052	0/0:33,0:33:96.31:0,96,1515	0/0:16,0:16:48.16:0,48,763	0/0:15,0:15:42.14:0,42,670	0/0:18,0:18:51.14:0,51,764	0/0:6,0:6:18.06:0,18,288	0/0:32,0:32:96.31:0,96,1507	0/0:21,0:21:63.21:0,63,1003	0/0:17,0:17:51.17:0,51,812	0/0:25,0:25:69.23:0,69,1083	0/1:7,0:6:69:69,0,81	0/1:9,3:12:14.09:216,0,14	0/1:5,1:6:9.18:38,0,9	0/0:15,0:15:45.15:0,45,717	0/0:26,0:26:72.23:0,72,1127	0/0:24,0:24:33.60:0,34,1036	0/0:8,0:8:21.07:0,21,336	0/0:17,0:17:51.17:0,51,800	1/1:3,1:4:8.92:80,9,0	0/0:16,0:16:48.16:0,48,765
chr10	104696986	.	AAGAT	A	720.09	PASS	AB=0.875;AC=9;AF=0.161;AN=56;BaseQRankSum=8.972;DP=458;FS=2.527;HRun=0;HaplotypeScore=88.6930;InbreedingCoeff=0.7648;MQ=61.58;MQ0=2;MQRankSum=-7.865;QD=22.50;ReadPosRankSum=-0.541;VQSLOD=3.1270;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.22:0,63,1688	1/1:2,0:2:6.01:62,6,0	0/0:19,0:16:42.14:0,42,1082	0/0:19,1:17:30.86:0,31,880	0/0:21,0:21:60.21:0,60,1519	0/0:18,0:18:48.13:0,48,1035	0/0:19,0:19:54.15:0,54,1197	0/0:3,0:1:3.01:0,3,72	0/0:24,0:24:69.24:0,69,1756	0/0:32,0:32:84.28:0,84,2292	0/0:15,0:15:45.15:0,45,1136	0/0:16,0:16:48.16:0,48,1311	0/0:15,0:15:42.14:0,42,1071	0/0:9,0:9:27.09:0,27,739	0/0:28,0:28:78.27:0,78,2127	0/0:20,0:20:57.20:0,57,1463	0/0:15,0:15:45.15:0,45,1208	0/0:24,0:24:69.24:0,69,1815	0/1:6,1:6:28.17:145,0,28	1/1:6,7:13:35.37:457,35,0	1/1:3,3:6:8.96:71,9,0	0/0:11,0:11:33.11:0,33,837	0/0:25,0:25:66.23:0,66,1754	0/0:23,0:23:39.48:0,39,1526	0/0:9,0:9:27.09:0,27,594	0/0:21,0:21:63.22:0,63,1591	1/1:2,2:4:8.99:135,9,0	0/0:17,0:17:51.18:0,51,1359
chr10	104696988	.	GA	G	196.20	PASS	AB=0.860;AC=7;AF=0.125;AN=56;BaseQRankSum=6.856;DP=452;FS=2.062;HRun=2;HaplotypeScore=62.1969;InbreedingCoeff=0.3758;MQ=60.32;MQ0=2;MQRankSum=-6.017;QD=5.95;ReadPosRankSum=0.246;VQSLOD=0.6942;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.21:0,63,1007	1/1:1,1:2:0.40:33,0,0	0/0:18,0:15:42.14:0,42,671	0/0:20,0:17:13.44:0,13,595	0/0:21,0:21:60.20:0,60,954	0/0:17,0:17:48.13:0,48,724	0/0:19,0:19:54.15:0,54,812	0/0:3,0:1:3.01:0,3,48	0/0:23,0:23:69.24:0,69,1097	0/0:30,0:30:84.29:0,84,1343	0/0:16,0:16:48.15:0,48,744	0/0:17,0:17:51.17:0,51,811	0/0:15,0:15:42.14:0,42,671	0/0:9,0:9:27.09:0,27,432	0/0:26,0:26:78.27:0,78,1247	0/0:19,0:19:57.19:0,57,911	0/0:15,0:15:45.15:0,45,719	0/0:25,0:25:72.21:0,72,1117	0/1:5,2:6:67.57:68,0,97	0/1:12,1:13:34.59:143,0,35	0/1:6,1:7:0.41:0,0,35	0/0:11,0:11:33.11:0,33,528	0/0:23,0:23:66.23:0,66,1052	0/0:23,0:23:69.20:0,69,1046	0/0:9,0:9:27.09:0,27,431	0/0:21,0:21:63.21:0,63,998	1/1:4,0:4:8.86:69,9,0	0/0:17,0:17:51.17:0,51,812
chr10	104696989	.	AT	A	291.69	PASS	AB=0.952;AC=7;AF=0.125;AN=56;BaseQRankSum=7.189;DP=453;FS=0.913;HRun=1;HaplotypeScore=61.5120;InbreedingCoeff=0.3601;MQ=60.25;MQ0=2;MQRankSum=-6.291;QD=9.41;ReadPosRankSum=-0.291;VQSLOD=0.8935;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.21:0,66,1032	1/1:2,0:2:1.94:36,2,0	0/0:17,0:14:42.14:0,42,673	0/0:19,1:17:1.73:0,2,582	0/0:21,0:21:60.19:0,60,934	0/0:17,0:17:45.15:0,45,707	0/0:17,0:17:51.17:0,51,814	0/0:3,0:1:3.01:0,3,47	0/0:24,0:24:69.21:0,69,1078	0/0:29,0:29:84.29:0,84,1343	0/0:16,0:16:48.16:0,48,765	0/0:17,0:17:51.17:0,51,813	0/0:16,0:16:42.14:0,42,670	0/0:9,0:9:27.09:0,27,432	0/0:26,0:26:78.27:0,78,1246	0/0:19,0:19:57.19:0,57,909	0/0:15,0:15:45.15:0,45,719	0/0:26,0:26:72.25:0,72,1145	0/1:7,0:6:71.68:72,0,75	0/1:10,2:12:9.05:212,0,9	0/1:6,0:6:15.33:18,0,15	0/0:11,0:11:33.11:0,33,526	0/0:24,0:24:69.22:0,69,1080	0/0:24,0:24:68.34:0,68,982	0/0:10,0:10:27.09:0,27,426	0/0:21,0:21:63.21:0,63,1007	1/1:2,2:4:8.91:80,9,0	0/0:17,0:17:51.17:0,51,815
chr10	104696990	.	T	TAGGA	712.73	PASS	AB=0.889;AC=10;AF=0.179;AN=56;BaseQRankSum=7.758;DP=458;FS=0.826;HRun=0;HaplotypeScore=90.0759;InbreedingCoeff=0.7132;MQ=60.11;MQ0=2;MQRankSum=-7.102;QD=19.80;ReadPosRankSum=-2.614;VQSLOD=3.0393;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.20:0,63,1061	1/1:1,1:2:4.26:75,4,0	0/0:16,0:13:27.09:0,27,441	0/0:20,0:17:26.84:0,27,414	0/0:23,0:23:48.16:0,48,807	0/0:17,0:17:39.13:0,39,650	0/0:17,0:17:34.36:0,34,689	1/1:3,0:1:3.01:41,3,0	0/0:24,0:24:60.20:0,60,993	0/0:29,0:29:84.27:0,84,1402	0/0:16,0:16:45.15:0,45,740	0/0:18,0:18:48.15:0,48,778	0/0:16,0:16:36.12:0,36,574	0/0:9,0:9:27.09:0,27,467	0/0:26,0:26:72.24:0,72,1199	0/0:19,0:19:51.17:0,51,853	0/0:15,0:15:42.14:0,42,722	0/0:26,0:26:72.25:0,72,1217	0/1:5,2:6:4.20:201,0,4	1/1:12,1:13:9.67:328,10,0	1/1:6,0:6:9.02:137,9,0	0/0:12,0:12:27.09:0,27,445	0/0:24,0:24:62.52:0,63,936	0/0:23,0:23:26.82:0,27,756	0/0:10,0:10:18.06:0,18,309	0/0:21,0:21:54.18:0,54,914	0/1:5,0:5:4.61:76,0,5	0/0:17,0:17:48.14:0,48,784
chr10	104696999	.	A	AG	97.11	PASS	AB=0.899;AC=6;AF=0.107;AN=56;BaseQRankSum=6.796;DP=476;FS=1.244;HRun=2;HaplotypeScore=64.7652;InbreedingCoeff=0.5242;MQ=59.11;MQ0=4;MQRankSum=-5.962;QD=3.47;ReadPosRankSum=-1.045;VQSLOD=-0.1349;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.23:0,72,892	1/1:1,1:2:4.26:45,4,0	0/0:20,0:12:33.06:0,33,371	0/0:24,0:18:32.88:0,33,381	0/0:23,0:23:63.20:0,63,780	0/0:16,0:16:45.09:0,45,531	0/0:20,0:20:29.81:0,30,641	0/0:7,0:5:11.69:0,12,70	0/0:24,0:24:69.16:0,69,826	0/0:31,0:31:90.28:0,90,1116	0/0:16,0:16:48.14:0,48,585	0/0:18,0:18:51.16:0,51,631	0/0:15,0:15:39.12:0,39,483	0/0:13,0:13:39.11:0,39,472	0/0:27,0:27:78.23:0,78,954	0/0:18,0:18:51.16:0,51,632	0/0:17,0:17:45.14:0,45,552	0/0:27,0:27:78.25:0,78,966	1/1:5,2:5:8.98:92,9,0	0/1:11,1:12:66.98:70,0,67	0/1:6,1:7:6.57:7,0,45	0/0:12,0:12:30.09:0,30,372	0/0:24,0:24:69.20:0,69,842	0/0:23,0:23:32.83:0,33,677	0/0:10,0:10:29.96:0,30,333	0/0:18,0:18:54.17:0,54,670	0/0:3,0:3:7.80:0,8,38	0/0:17,0:17:48.15:0,48,593
chr10	104697009	.	A	AAGGG	1735.30	PASS	AB=0.962;AC=13;AF=0.232;AN=56;BaseQRankSum=3.393;DP=501;FS=1.323;HRun=0;HaplotypeScore=92.0849;InbreedingCoeff=0.8535;MQ=58.59;MQ0=5;MQRankSum=-5.277;QD=22.25;ReadPosRankSum=-3.034;VQSLOD=2.9945;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.19:0,78,1373	1/1:1,1:2:3.01:77,3,0	0/1:24,0:12:7.71:8,0,309	0/0:26,0:18:39.37:0,39,529	0/0:23,0:23:69.05:0,69,1103	0/0:20,0:20:51.11:0,51,863	0/0:25,0:24:62.89:0,63,1009	1/1:3,8:13:12.15:402,12,0	0/0:22,0:22:63.12:0,63,966	0/0:30,0:30:81.26:0,81,1439	0/0:14,0:14:42.13:0,42,763	0/0:15,0:15:45.15:0,45,823	0/0:15,0:15:36.09:0,36,589	0/0:13,0:13:39.13:0,39,738	0/0:24,0:24:66.17:0,66,1124	0/0:22,0:22:60.15:0,60,967	0/0:17,0:17:45.14:0,45,820	0/0:27,0:27:78.23:0,78,1411	1/1:6,2:6:17.96:294,18,0	1/1:11,2:13:36.06:655,36,0	1/1:7,0:8:14.79:290,15,0	0/0:11,0:11:33:0,33,549	0/0:23,0:23:62.98:0,63,1014	0/0:21,0:21:59.77:0,60,960	0/0:13,0:13:35.94:0,36,556	0/0:19,0:19:54.15:0,54,932	1/1:2,4:7:9.03:185,9,0	0/0:16,0:16:48.04:0,48,833
chr10	104697155	.	G	GGAAAAAAAA	9893.72	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=5.984;DP=571;FS=19.362;HRun=0;HaplotypeScore=174.5805;InbreedingCoeff=0.8999;MQ=58.94;MQ0=5;MQRankSum=-13.171;QD=57.19;ReadPosRankSum=-8.072;VQSLOD=1.5864;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:93.30:0,93,2213	1/1:3,0:3:3.01:44,3,0	0/0:15,0:12:16.84:0,17,220	0/0:22,0:11:10.58:0,11,167	0/0:31,0:31:65.10:0,65,1611	1/1:5,13:19:30.10:1332,30,0	1/1:7,13:20:45.15:1865,45,0	1/1:45,3:46:84.94:2728,85,0	0/0:20,0:20:35.91:0,36,765	0/0:24,0:23:45.15:0,45,1167	0/0:16,0:16:30.09:0,30,767	0/0:13,0:13:33.07:0,33,834	0/0:11,0:11:33.11:0,33,783	0/0:17,0:17:36.12:0,36,924	0/0:28,0:27:51.16:0,51,1232	0/0:16,0:16:33.11:0,33,849	0/0:25,0:25:45.15:0,45,1124	0/0:19,0:19:18.94:0,19,519	1/1:12,5:15:30.06:978,30,0	1/1:11,6:17:27.04:994,27,0	1/1:10,0:10:2.29:132,2,0	0/0:8,0:8:15.05:0,15,360	0/0:16,0:16:33.10:0,33,839	0/0:19,0:19:40.01:0,40,1002	1/1:22,6:27:50.37:1687,50,0	0/0:35,0:35:72.23:0,72,1790	1/1:9,1:10:3.01:133,3,0	0/0:22,0:22:44.32:0,44,1342
chr10	104697187	.	TATGATAGATAG	T	1823.12	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-2.273;DP=598;FS=8.024;HRun=0;HaplotypeScore=240.7147;InbreedingCoeff=0.8469;MQ=59.86;MQ0=10;MQRankSum=-5.917;QD=18.60;ReadPosRankSum=-2.331;VQSLOD=0.7363;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:96.33:0,96,1958	1/1:0,6:6:3.01:100,3,0	0/0:29,0:12:12.10:0,12,162	0/0:31,0:14:21.54:0,22,285	0/0:34,0:34:63.21:0,63,1155	0/0:17,0:17:18.06:0,18,729	0/0:19,0:19:24.07:0,24,585	1/1:35,0:35:47.99:625,48,0	0/0:25,0:25:53.83:0,54,1153	0/0:30,0:30:78.26:0,78,1647	0/0:13,0:13:27.09:0,27,546	0/0:16,0:16:37.83:0,38,761	0/0:16,0:16:39.12:0,39,830	0/0:15,0:15:36.12:0,36,718	0/0:24,0:23:48.16:0,48,1054	0/0:17,0:17:39.13:0,39,745	0/0:21,0:21:48.16:0,48,1030	0/0:15,0:15:26.50:0,26,717	1/1:9,10:18:30.10:615,30,0	1/1:6,10:16:9.03:301,9,0	1/1:9,0:9:2.94:46,3,0	0/0:6,0:6:15.05:0,15,682	0/0:23,0:23:51.17:0,51,988	0/0:16,0:16:45.05:0,45,923	0/0:40,0:39:1.58:0,2,153	0/0:31,0:31:90.31:0,90,1823	1/1:1,12:13:9.50:301,10,0	0/0:20,0:20:42.14:0,42,810
chr10	104697200	.	TGATA	T	7007.34	PASS	AB=0.889;AC=37;AF=0.685;AN=54;BaseQRankSum=0.367;DP=562;FS=9.396;HRun=0;HaplotypeScore=148.9403;InbreedingCoeff=0.5589;MQ=58.74;MQ0=11;MQRankSum=0.748;QD=17.52;ReadPosRankSum=3.039;VQSLOD=4.2120;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,18:39:42.14:648,42,0	1/1:7,0:7:3:26,3,0	./.	0/0:27,0:11:0:0,0,0	1/1:16,13:29:21.07:323,21,0	0/0:13,0:15:10.91:0,11,218	0/0:15,0:17:5.87:0,6,93	0/0:3,0:17:3.01:0,3,42	1/1:5,17:22:42.11:648,42,0	1/1:17,13:30:39.13:602,39,0	1/1:5,9:14:21:324,21,0	1/1:10,6:16:21.06:306,21,0	1/1:5,9:14:24.08:370,24,0	1/1:7,9:16:15.05:231,15,0	1/1:5,18:22:33.11:509,33,0	1/1:6,12:18:24.08:370,24,0	1/1:7,16:24:39.13:602,39,0	1/1:7,8:15:18.06:278,18,0	0/1:13,0:14:61.30:61,0,66	0/1:12,0:14:54.49:65,0,54	0/0:3,0:10:3.01:0,3,69	0/0:10,0:10:27.09:0,27,627	1/1:11,11:22:21.07:325,21,0	0/1:10,10:20:49.24:257,0,49	0/0:29,0:41:12.65:0,13,147	1/1:17,16:33:48.15:707,48,0	1/1:12,0:12:8.99:77,9,0	1/1:8,8:16:18.06:278,18,0
chr10	104697741	.	GCA	G	8758.33	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=17.875;DP=1157;FS=3.488;HRun=0;HaplotypeScore=156.0062;InbreedingCoeff=0.9621;MQ=61.03;MQ0=6;MQRankSum=-1.040;QD=26.70;ReadPosRankSum=-2.334;VQSLOD=5.2872;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:68,0:68:99:0,160,2599	0/0:5,0:18:44.98:0,45,435	0/0:34,0:17:17.93:0,18,360	0/0:37,0:24:33.10:0,33,530	0/0:36,0:36:93.32:0,93,1531	1/1:2,19:20:42.13:525,42,0	1/1:10,41:52:99:1351,114,0	1/1:8,29:36:87.23:1037,87,0	0/0:51,1:52:99:0,101,2170	0/0:62,0:62:99:0,175,2824	0/0:20,0:20:48.16:0,48,792	0/0:51,1:52:99:0,103,2155	0/0:42,0:42:99:0,117,1915	0/0:53,0:53:99:0,151,2447	0/0:61,1:63:99:0,117,2564	0/0:51,0:50:99:0,141,2293	0/0:27,0:25:60.20:0,60,977	0/0:23,0:23:51.03:0,51,968	1/1:8,17:24:48.15:599,48,0	1/1:3,15:18:38.91:418,39,0	1/1:19,101:118:99:3501,283,0	0/0:33,2:35:18.24:0,18,1324	0/0:25,0:26:66.19:0,66,1030	0/0:62,1:63:99:0,157,2535	1/1:8,18:28:54:652,54,0	0/0:50,1:51:99:0,107,2214	1/1:4,21:26:54.17:675,54,0	0/0:15,0:15:1.60:0,2,557
chr10	104697968	.	A	ACATG	11996.51	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-17.852;DP=1215;FS=8.997;HRun=0;HaplotypeScore=191.1336;InbreedingCoeff=0.9736;MQ=59.93;MQ0=3;MQRankSum=2.481;QD=35.49;ReadPosRankSum=0.688;VQSLOD=4.2279;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:73,0:73:99:0,147,2352	1/1:2,16:19:48.16:1187,48,0	0/0:20,0:10:5.67:0,6,48	0/0:26,0:14:13.88:0,14,85	0/0:23,0:23:51.17:0,51,842	0/0:32,0:32:54.18:0,54,903	0/0:64,0:64:99:0,147,2350	1/1:30,25:56:81.28:1763,81,0	0/0:42,0:42:93.32:0,93,1544	0/0:68,0:68:99:0,181,2980	0/0:22,0:22:54.16:0,54,853	0/0:36,0:37:90.30:0,90,1452	0/0:44,0:44:99:0,111,1770	0/0:53,0:53:99:0,138,2267	0/0:69,0:69:99:0,150,2460	0/0:53,0:53:99:0,123,2000	0/0:31,0:31:60.20:0,60,988	0/0:32,0:32:63.72:0,64,1064	1/1:16,12:30:45.11:960,45,0	1/1:17,23:41:57.03:1409,57,0	1/1:51,105:160:99:5787,235,0	0/0:29,0:29:69.24:0,69,1151	0/0:26,0:26:63.22:0,63,1041	0/0:43,0:43:75.21:0,75,1224	0/0:31,0:31:48.16:0,48,797	0/0:41,0:41:93.32:0,93,1541	1/1:11,17:30:36.11:890,36,0	0/0:18,0:18:39.13:0,39,644
chr10	104698424	.	G	GT	5720.79	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.216;DP=659;FS=14.162;HRun=1;HaplotypeScore=73.1519;InbreedingCoeff=0.9742;MQ=76.20;MQ0=0;MQRankSum=0.287;QD=37.89;ReadPosRankSum=-1.532;VQSLOD=3.3039;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,162,2054	1/1:0,11:11:33.11:491,33,0	0/0:14,0:14:33:0,33,400	0/0:11,0:11:5.82:0,6,186	0/0:18,0:18:54.14:0,54,668	0/0:19,0:19:51.17:0,51,661	0/0:37,0:37:99:0,108,1345	1/1:4,27:31:84.21:1127,84,0	0/0:24,0:24:66.20:0,66,840	0/0:24,0:24:69.19:0,69,855	0/0:8,0:8:21.04:0,21,245	0/0:31,0:31:93.26:0,93,1160	0/0:17,0:17:51.12:0,51,629	0/0:28,0:28:81.23:0,81,1019	0/0:23,0:23:69.22:0,69,894	0/0:27,0:27:81.23:0,81,1020	0/0:33,0:33:96.29:0,96,1227	0/0:25,0:25:75.16:0,75,932	1/1:1,14:15:39.10:542,39,0	1/1:0,19:20:51.13:738,51,0	1/1:1,54:55:99:2150,144,0	0/0:17,0:17:51.13:0,51,631	0/0:11,0:11:33.11:0,33,426	0/0:34,0:34:99:0,102,1291	0/0:22,0:22:48.80:0,49,697	0/0:24,0:24:68.80:0,69,854	1/1:0,19:19:45.15:673,45,0	0/0:5,0:5:15.05:0,15,192
chr10	104699166	.	CAG	C	752.29	PASS	AB=0.822;AC=10;AF=0.179;AN=56;BaseQRankSum=8.231;DP=720;FS=2.343;HRun=0;HaplotypeScore=105.9450;InbreedingCoeff=0.6751;MQ=53.65;MQ0=17;MQRankSum=-7.677;QD=4.89;ReadPosRankSum=0.537;VQSLOD=2.7655;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,102,1720	1/1:3,9:10:8.92:79,9,0	0/0:37,0:4:12.04:0,12,213	0/0:31,0:13:19.59:0,20,315	0/0:21,0:21:63.22:0,63,1111	0/0:12,5:17:30.10:0,30,526	0/0:19,1:18:33.03:0,33,578	1/1:28,7:30:9.22:290,9,0	0/0:18,0:18:48.12:0,48,817	0/0:32,0:32:84.28:0,84,1461	0/0:26,0:26:66.19:0,66,1102	0/0:29,0:29:75.26:0,75,1324	0/0:18,0:18:51.17:0,51,893	0/0:23,0:23:60.21:0,60,1058	0/0:30,0:29:72.23:0,72,1244	0/0:30,0:30:90.24:0,90,1506	0/0:26,0:26:57.08:0,57,999	0/0:44,0:43:83.31:0,83,1748	0/1:11,10:12:1.14:273,0,1	0/1:9,16:22:1.59:33,0,2	0/1:18,0:18:0.01:0,0,0	0/0:23,0:23:63.20:0,63,1089	0/0:18,0:18:54.18:0,54,949	0/0:39,0:38:93.28:0,93,1603	0/1:20,0:20:32.60:33,0,544	0/0:37,0:37:99:0,99,1724	1/1:5,18:21:16.60:192,17,0	0/0:8,0:8:24.08:0,24,401
chr10	104699174	.	CAGAAACAG	C	755.67	PASS	AB=0.972;AC=7;AF=0.125;AN=56;BaseQRankSum=8.359;DP=711;FS=1.477;HRun=0;HaplotypeScore=173.9877;InbreedingCoeff=0.5032;MQ=53.98;MQ0=13;MQRankSum=-4.746;QD=7.63;ReadPosRankSum=-2.360;VQSLOD=2.0235;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,3187	0/1:10,1:9:6.20:51,0,6	0/0:33,0:5:15.02:0,15,230	0/0:38,0:18:36.91:0,37,628	0/0:22,0:22:63.20:0,63,2123	0/0:17,0:17:30.10:0,30,1089	0/0:23,0:21:51.90:0,52,1717	0/1:20,0:18:62.01:147,0,62	0/0:19,0:19:55.99:0,56,1992	0/0:35,0:35:99:0,105,3481	0/0:23,0:23:64.06:0,64,2229	0/0:25,0:25:75.26:0,75,2782	0/0:19,0:19:57.16:0,57,1872	0/0:22,0:22:60.19:0,60,1973	0/0:27,0:27:72.18:0,72,2184	0/0:30,0:30:90.24:0,90,2644	0/0:28,0:28:69.98:0,70,2396	0/0:43,0:43:73.61:0,74,3607	0/1:19,0:14:99:263,0,143	1/1:21,4:22:9.02:115,9,0	0/0:4,17:21:1.77:0,2,6	0/0:21,0:21:63.16:0,63,2066	0/0:21,0:21:63.22:0,63,2358	0/0:39,0:39:99:0,99,3562	0/0:21,0:20:22.41:0,22,1395	0/0:36,0:36:99:0,102,3670	1/1:22,2:22:20.85:317,21,0	0/0:7,0:7:21.06:0,21,555
chr10	104699180	.	CAG	C	427.99	PASS	AB=0.966;AC=8;AF=0.143;AN=56;BaseQRankSum=6.837;DP=715;FS=10.440;HRun=0;HaplotypeScore=108.1109;InbreedingCoeff=0.5290;MQ=54.70;MQ0=14;MQRankSum=-4.168;QD=3.42;ReadPosRankSum=-2.499;VQSLOD=1.4016;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,105,1721	0/1:11,0:9:4.95:12,0,5	0/0:32,0:5:9.03:0,9,137	0/0:39,0:21:38.68:0,39,568	0/0:23,0:23:66.19:0,66,1087	0/0:13,0:13:30.10:0,30,532	0/0:22,0:22:48.16:0,48,851	0/1:22,0:20:41.33:41,0,146	0/0:18,0:18:51.17:0,51,905	0/0:36,0:36:99:0,102,1779	0/0:23,0:23:63.19:0,63,1080	0/0:25,0:25:75.22:0,75,1256	0/0:20,0:20:51.17:0,51,897	0/0:25,0:25:69.23:0,69,1176	0/0:26,0:26:63.19:0,63,1047	0/0:28,0:28:72.21:0,72,1204	0/0:26,0:26:74.67:0,75,1220	0/0:42,1:43:60.71:0,61,1692	0/1:18,1:14:53.02:122,0,53	1/1:22,3:23:12.02:130,12,0	0/1:19,2:21:0:0,0,0	0/0:20,0:20:60.18:0,60,993	0/0:22,0:22:66.23:0,66,1171	0/0:40,0:40:99:0,99,1698	0/0:21,0:20:45.11:0,45,757	0/0:35,0:35:99:0,105,1822	1/1:24,3:25:12.54:257,13,0	0/0:7,0:7:18.02:0,18,258
chr10	104699853	.	TA	T	698.77	PASS	AB=0.934;AC=14;AF=0.250;AN=56;BaseQRankSum=8.459;DP=463;FS=5.903;HRun=14;HaplotypeScore=64.6274;InbreedingCoeff=0.5044;MQ=75.63;MQ0=0;MQRankSum=-0.955;QD=4.31;ReadPosRankSum=1.027;VQSLOD=1.2617;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,4:39:27.66:0,28,510	0/0:4,0:7:5.84:0,6,42	0/1:19,0:16:8.61:9,0,96	0/1:12,0:12:0.01:0,0,71	0/0:15,1:16:6.43:0,6,198	0/0:13,1:15:10.88:0,11,240	0/0:21,2:23:39.23:0,39,453	1/1:7,10:19:27.75:175,28,0	0/0:14,0:15:32.98:0,33,289	0/0:14,0:14:12.01:0,12,112	0/0:5,0:5:3:0,3,28	0/0:11,0:11:21.01:0,21,191	0/0:7,0:7:9.01:0,9,83	0/0:15,3:18:3.42:0,3,169	0/0:13,0:13:21:0,21,186	0/0:14,1:17:8.37:0,8,231	0/1:25,5:31:19.37:19,0,391	0/0:17,0:20:32.83:0,33,281	1/1:14,11:26:2.20:201,2,0	1/1:5,9:14:23.69:161,24,0	1/1:5,13:18:20.76:143,21,0	0/0:12,0:12:18.49:0,18,168	0/1:8,1:9:5.57:6,0,93	0/0:28,0:28:56.98:0,57,506	0/0:8,0:10:12.01:0,12,111	0/0:25,0:25:30.99:0,31,373	1/1:5,8:14:7.76:149,8,0	0/0:5,0:5:11.85:0,12,97
chr10	104700443	.	CT	C	8108.06	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=1.055;DP=256;FS=7.626;HRun=3;HaplotypeScore=192.5907;InbreedingCoeff=0.4244;MQ=32.85;MQ0=0;MQRankSum=-1.732;QD=31.80;ReadPosRankSum=1.716;VQSLOD=3.2089;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:16:39.12:482,39,0	1/1:0,5:5:11.83:148,12,0	./.	0/0:1,0:1:2.22:0,2,7	1/1:0,10:10:30.09:371,30,0	1/1:1,9:10:24.08:297,24,0	1/1:0,14:14:42.13:519,42,0	1/1:1,28:29:84.26:1039,84,0	1/1:0,11:11:33.10:408,33,0	1/1:0,12:12:36.07:428,36,0	1/1:0,6:6:15.05:186,15,0	1/1:0,11:11:33.10:408,33,0	1/1:0,8:8:21.07:260,21,0	1/1:0,2:2:6.02:74,6,0	1/1:0,6:6:18.06:223,18,0	1/1:1,6:7:18.06:222,18,0	1/1:1,7:8:18.06:223,18,0	1/1:0,6:5:15.05:186,15,0	1/1:0,6:6:18.06:223,18,0	1/1:0,3:3:6.02:74,6,0	1/1:3,18:20:33.10:408,33,0	1/1:0,13:13:36.11:445,36,0	1/1:0,5:5:15.05:185,15,0	1/1:1,13:14:20.69:259,21,0	1/1:1,6:7:18.06:223,18,0	1/1:0,16:16:48.15:594,48,0	1/1:1,6:7:15.05:186,15,0	1/1:0,1:1:3.01:37,3,0
chr10	104700467	.	CA	C	8580.66	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=-0.007;DP=296;FS=8.526;HRun=2;HaplotypeScore=206.9097;InbreedingCoeff=0.5052;MQ=35.63;MQ0=0;MQRankSum=-1.732;QD=29.19;ReadPosRankSum=1.201;VQSLOD=3.3235;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:23:57.16:677,57,0	1/1:1,7:8:21.06:259,21,0	./.	0/0:2,0:2:2.04:0,2,7	1/1:3,9:12:24.03:301,24,0	1/1:0,12:12:36.11:449,36,0	1/1:3,15:18:45.07:533,45,0	1/1:9,17:25:48.14:587,48,0	1/1:1,16:17:48.15:599,48,0	1/1:1,11:12:33.10:417,33,0	1/1:0,5:5:12.04:148,12,0	1/1:3,10:13:33.10:410,33,0	1/1:0,12:12:36.11:450,36,0	1/1:0,4:4:12.04:146,12,0	1/1:1,8:9:24.08:298,24,0	1/1:1,9:10:27.09:337,27,0	1/1:2,9:11:24.07:292,24,0	1/1:1,7:7:18.06:221,18,0	1/1:2,6:8:21.07:261,21,0	1/1:0,4:4:12.04:148,12,0	1/1:7,14:20:27.09:335,27,0	1/1:1,7:8:17.73:195,18,0	1/1:1,3:4:9.03:113,9,0	1/1:4,11:15:26.81:311,27,0	1/1:2,5:7:15.05:187,15,0	1/1:2,18:20:57.13:691,57,0	1/1:0,4:4:12.04:143,12,0	1/1:0,2:2:6.02:73,6,0
chr10	104702312	.	GA	G	736.51	PASS	AB=0.808;AC=25;AF=0.446;AN=56;BaseQRankSum=6.413;DP=507;FS=6.606;HRun=15;HaplotypeScore=71.4073;InbreedingCoeff=0.1922;MQ=85.43;MQ0=1;MQRankSum=-0.032;QD=2.62;ReadPosRankSum=3.396;VQSLOD=-0.5504;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,2:50:30.89:0,31,610	0/1:2,3:6:12.46:50,0,12	0/0:33,0:25:10.16:0,10,145	0/1:24,0:21:12.24:12,0,53	0/1:10,0:11:6.33:6,0,88	1/1:5,1:12:17.11:59,17,0	1/1:7,0:26:26.43:76,26,0	1/1:6,13:20:0.06:125,0,0	0/0:10,0:11:18.37:0,18,144	0/0:8,0:12:22.08:0,22,165	0/1:11,2:14:8.61:9,0,166	0/1:12,3:17:34.24:34,0,126	0/1:4,2:6:10.28:10,0,39	0/1:10,2:13:24.37:24,0,82	0/0:14,1:15:16.61:0,17,252	0/1:15,3:18:1.09:1,0,211	0/0:24,3:27:28.67:0,29,362	0/0:19,1:22:3.19:0,3,210	1/1:7,10:20:6.13:137,6,0	0/1:6,6:13:3.90:82,0,4	1/1:1,5:6:5.90:38,6,0	0/0:21,0:21:43.15:0,43,351	0/1:25,1:27:9.51:10,0,327	0/0:21,0:23:29.80:0,30,240	1/1:4,0:19:29.33:92,29,0	0/1:6,4:13:34.34:34,0,120	1/1:2,10:14:19.56:115,20,0	0/0:11,0:11:17.94:0,18,144
chr10	104703841	.	GACCGTTGAGA	G	4248.73	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.513;DP=642;FS=9.483;HRun=0;HaplotypeScore=187.1507;InbreedingCoeff=0.9967;MQ=71.06;MQ0=0;MQRankSum=-10.528;QD=73.25;ReadPosRankSum=0.941;VQSLOD=4.1886;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,151,7727	0/0:8,0:8:18.06:0,18,954	0/0:17,0:17:45.15:0,45,1836	0/0:21,0:21:59.36:0,59,2738	0/0:32,0:32:90.29:0,90,4252	1/1:3,18:21:51.18:1679,51,0	1/1:3,12:15:30.10:988,30,0	0/0:31,0:31:90.31:0,90,4541	0/0:24,0:24:66.23:0,66,3468	0/0:21,0:20:57.17:0,57,2660	0/0:24,0:24:63.22:0,63,3223	0/0:20,0:20:57.20:0,57,2711	0/0:21,0:21:57.20:0,57,2900	0/0:15,0:15:39.13:0,39,2038	0/0:28,0:28:84.25:0,84,4168	0/0:18,0:18:54.14:0,54,2393	0/0:35,0:35:99:0,102,5293	0/0:16,0:16:45.14:0,45,2107	0/0:20,0:20:57.20:0,57,2814	0/0:25,0:25:63.22:0,63,3130	0/0:38,0:38:99:0,102,5272	0/0:20,0:20:60.21:0,60,3111	0/0:22,0:22:63.22:0,63,3334	0/0:15,0:15:45.15:0,45,2246	1/1:0,22:22:48.16:1581,48,0	0/0:21,0:21:57.20:0,57,2666	0/0:26,0:26:75.26:0,75,3822	0/0:12,0:12:30.10:0,30,1511
chr10	104704745	.	GATTT	G	444.75	PASS	AC=12;AF=0.261;AN=46;BaseQRankSum=3.393;DP=310;FS=1.284;HRun=0;HaplotypeScore=51.4524;InbreedingCoeff=0.5967;MQ=55.40;MQ0=10;MQRankSum=-0.768;QD=6.26;ReadPosRankSum=-0.795;VQSLOD=1.7779;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:15.05:0,15,353	0/0:6,0:6:6.02:0,6,141	./.	./.	0/0:10,0:10:9.03:0,9,211	0/0:10,0:9:12.04:0,12,175	0/0:3,0:3:0.47:0,0,1	1/1:24,0:21:3.01:35,3,0	1/1:6,5:10:9.03:136,9,0	0/0:7,0:7:3.01:0,3,71	0/0:13,0:13:16.30:0,16,356	0/0:5,0:4:9.03:0,9,211	0/0:5,0:5:6.02:0,6,127	0/0:8,0:8:6.02:0,6,139	0/0:10,0:9:9.03:0,9,211	./.	0/0:27,0:26:45.15:0,45,966	0/0:23,0:23:33.11:0,33,776	1/1:9,4:10:12.04:186,12,0	1/1:6,2:5:6.02:93,6,0	1/1:3,2:3:6.02:90,6,0	./.	./.	0/0:10,0:9:3.01:0,3,66	0/0:4,0:4:3.01:0,3,38	0/0:9,0:8:6.02:0,6,141	1/1:8,2:9:3.01:46,3,0	0/0:8,0:7:9:0,9,119
chr10	104706781	.	GTGAGAGGTTCTGCCCT	G	5904.41	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.650;DP=605;FS=3.625;HRun=0;HaplotypeScore=258.0077;InbreedingCoeff=0.9948;MQ=85.93;MQ0=0;MQRankSum=-9.106;QD=77.69;ReadPosRankSum=0.355;VQSLOD=4.5389;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,160,11653	0/0:6,0:6:18.06:0,18,1312	0/0:22,0:22:66.19:0,66,3658	0/0:28,0:28:84.29:0,84,5755	0/0:23,0:23:66.19:0,66,4466	0/0:15,0:15:45.14:0,45,3222	0/0:19,0:19:57.20:0,57,3605	1/1:7,10:17:30.10:1328,30,0	0/0:17,0:17:48.16:0,48,3653	0/0:24,0:24:69.24:0,69,5384	0/0:18,0:18:54.19:0,54,3959	0/0:10,0:10:30.10:0,30,2328	0/0:22,0:22:66.21:0,66,4400	0/0:26,0:26:78.25:0,78,5163	0/0:34,0:34:99:0,99,7330	0/0:22,0:22:66.23:0,66,4805	0/0:32,0:32:96.30:0,96,6758	0/0:31,0:31:84.29:0,84,5855	1/1:8,8:16:21.07:758,21,0	1/1:2,9:11:27.09:1273,27,0	1/1:3,9:12:18.06:842,18,0	0/0:17,0:17:51.18:0,51,3644	0/0:21,0:21:60.21:0,60,4306	0/0:28,0:28:84.27:0,84,5700	0/0:14,0:14:42.14:0,42,3175	0/0:31,0:31:90.26:0,90,6619	1/1:6,14:20:36.12:1703,36,0	0/0:16,0:16:48.16:0,48,3458
chr10	104707847	.	AGAC	A	510.71	PASS	AC=16;AF=0.889;AN=18;BaseQRankSum=-1.735;DP=25;FS=12.041;HRun=0;HaplotypeScore=20.9695;MQ=55.67;MQ0=6;MQRankSum=-1.735;QD=31.92;ReadPosRankSum=-0.868;VQSLOD=1.7123;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,1:1:3.01:38,3,0	./.	0/0:4,0:1:3.01:0,3,38	1/1:1,1:1:2.92:17,3,0	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:36,3,0	./.	1/1:0,4:4:12.04:167,12,0	1/1:0,1:1:3.01:37,3,0	./.	1/1:0,3:3:9.03:111,9,0	./.	1/1:0,2:2:6.02:87,6,0	1/1:0,2:2:6.02:98,6,0	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	104707855	.	T	TA	188.99	PASS	AC=16;AF=0.800;AN=20;BaseQRankSum=-0.945;DP=25;FS=16.564;HRun=0;HaplotypeScore=22.5993;InbreedingCoeff=0.4187;MQ=75.55;MQ0=1;MQRankSum=-0.945;QD=12.60;ReadPosRankSum=0.945;VQSLOD=2.3550;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,1:1:2.94:18,3,0	0/0:6,0:1:3:0,3,28	0/0:3,0:2:5.88:0,6,50	1/1:0,1:1:0.47:1,0,0	./.	./.	./.	./.	./.	1/1:0,1:1:2.90:16,3,0	./.	1/1:0,4:4:11.72:74,12,0	1/1:0,1:1:2.96:19,3,0	./.	1/1:0,3:3:8.85:57,9,0	./.	1/1:0,2:2:5.99:51,6,0	1/1:1,1:2:5.95:44,6,0	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	104708406	.	A	AGAGC	4819.04	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.362;DP=517;FS=1.706;HRun=0;HaplotypeScore=88.9835;InbreedingCoeff=0.9851;MQ=96.45;MQ0=0;MQRankSum=-3.735;QD=54.76;ReadPosRankSum=1.248;VQSLOD=6.0851;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.27:0,78,1447	0/0:8,0:8:20.99:0,21,391	0/0:29,0:29:63.21:0,63,1102	0/0:23,0:23:51.14:0,51,885	0/0:4,0:4:12.04:0,12,224	0/0:22,0:22:60.21:0,60,1118	0/0:22,0:22:54.18:0,54,982	1/1:7,13:20:45.14:1097,45,0	0/0:20,0:20:60.19:0,60,1087	0/0:12,0:12:33.11:0,33,616	0/0:16,0:16:45.13:0,45,806	0/0:23,0:23:69.24:0,69,1286	0/0:15,0:15:45.14:0,45,807	0/0:16,0:16:42.14:0,42,775	0/0:18,0:18:51.16:0,51,921	0/0:24,0:24:72.25:0,72,1339	0/0:35,0:35:93.32:0,93,1735	0/0:26,0:26:75.26:0,75,1387	1/1:5,8:13:30.57:768,31,0	1/1:2,5:8:15.05:398,15,0	1/1:8,32:40:77.93:2078,78,0	0/0:16,0:16:45.14:0,45,794	0/0:15,0:15:39.13:0,39,717	0/0:19,0:19:57.18:0,57,1031	0/0:11,0:11:30.10:0,30,559	0/0:11,0:11:21.07:0,21,392	1/1:0,6:7:18.06:479,18,0	0/0:15,0:15:45.15:0,45,839
chr10	104708540	.	GCA	G	87.99	PASS	AB=0.913;AC=16;AF=0.320;AN=50;BaseQRankSum=2.988;DP=479;FS=3.677;HRun=0;HaplotypeScore=70.7713;InbreedingCoeff=-0.1088;MQ=64.08;MQ0=21;MQRankSum=-0.659;QD=0.41;ReadPosRankSum=-0.771;VQSLOD=1.3932;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:20.64:21,0,66	0/0:5,0:5:6.01:0,6,70	./.	./.	0/1:13,2:14:10.02:12,0,10	0/0:22,0:20:2.37:0,2,8	0/0:22,0:20:4.24:0,4,27	1/1:16,0:15:2.60:10,3,0	0/1:19,1:20:19.69:20,0,119	0/0:12,0:11:5.06:0,5,16	1/1:9,0:8:2.80:13,3,0	0/1:11,2:12:13.68:14,0,181	0/0:7,0:7:5.69:0,6,54	0/0:9,0:8:11.25:0,11,137	0/1:18,0:19:12.08:12,0,108	0/1:7,3:9:22.72:23,0,57	0/1:20,3:23:42.42:42,0,175	0/0:20,0:20:8.20:0,8,239	0/0:12,0:12:3.07:0,3,17	0/0:5,0:4:0:0,0,0	0/0:38,0:38:34.57:0,35,361	1/1:10,0:12:5.68:28,6,0	0/1:10,0:12:5.02:5,0,77	0/1:26,0:26:4.35:4,0,66	./.	0/0:15,0:15:6.72:0,7,70	0/0:11,0:12:3:0,3,26	0/1:12,0:10:18.98:19,0,36
chr10	104708587	.	CACACACAT	C	435.59	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.599;DP=553;FS=2.602;HRun=0;HaplotypeScore=127.3270;InbreedingCoeff=0.8841;MQ=55.84;MQ0=26;MQRankSum=0.466;QD=10.62;ReadPosRankSum=-2.247;VQSLOD=2.1550;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:72.07:0,72,815	0/0:8,0:8:15.01:0,15,350	0/0:22,0:9:19.80:0,20,184	0/0:28,0:13:38.32:0,38,339	0/0:21,0:20:38.72:0,39,360	0/0:5,15:19:5.83:0,6,37	1/1:30,0:29:56.89:452,57,0	0/0:23,0:18:54.82:0,55,466	0/0:16,0:16:29.06:0,29,569	0/0:19,0:18:49.81:0,50,531	0/0:12,0:12:15.01:0,15,183	0/0:15,0:14:33.07:0,33,941	0/0:5,0:5:11.65:0,12,274	0/0:12,0:11:23.86:0,24,507	0/0:20,0:20:53.57:0,54,730	0/0:13,0:12:21.01:0,21,363	0/0:35,0:35:83.62:0,84,1473	0/0:22,0:21:53.99:0,54,1120	0/0:17,0:15:44.02:0,44,455	0/0:11,0:10:23.94:0,24,247	0/0:52,0:51:99:0,117,2024	0/0:15,0:14:23.89:0,24,225	0/0:21,0:20:29.99:0,30,464	0/0:31,0:31:64.83:0,65,1038	1/1:11,0:11:11.98:100,12,0	0/0:20,0:19:49.86:0,50,644	0/0:9,0:9:20.95:0,21,300	0/0:11,0:6:14.90:0,15,219
chr10	104708913	.	AG	A	1105.20	PASS	AB=0.981;AC=21;AF=0.375;AN=56;BaseQRankSum=9.523;DP=467;FS=108.755;HRun=1;HaplotypeScore=69.2009;InbreedingCoeff=0.6858;MQ=46.05;MQ0=7;MQRankSum=-8.514;QD=5.64;ReadPosRankSum=-4.623;VQSLOD=-0.2772;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,1:25:32.14:0,32,359	1/1:7,0:7:5.41:27,5,0	0/0:9,0:5:12.01:0,12,112	0/0:5,0:3:2.08:0,2,41	0/0:24,0:23:30.91:0,31,414	1/1:18,0:18:39.14:243,39,0	1/1:19,0:17:29.40:168,29,0	1/1:30,2:30:54.22:270,54,0	0/0:13,0:13:23.99:0,24,278	0/0:17,0:17:42.94:0,43,382	0/0:15,0:15:7.41:0,7,214	0/1:13,0:13:17.55:18,0,100	0/0:13,0:13:15.45:0,15,213	0/0:12,0:12:26.24:0,26,216	0/0:19,0:19:34.81:0,35,332	0/0:18,0:18:1.41:0,1,239	0/0:32,0:27:8.30:0,8,316	0/0:26,0:22:16.68:0,17,326	1/1:21,0:20:48.17:234,48,0	1/1:14,0:14:13.82:67,14,0	1/1:6,0:6:14.18:73,14,0	0/0:17,0:17:36.31:0,36,302	0/1:16,1:16:2.20:2,0,186	0/0:14,1:13:17.43:0,17,227	1/1:14,0:14:23.86:138,24,0	0/1:16,0:15:6.91:7,0,233	1/1:19,0:19:9.90:57,10,0	0/0:6,0:5:9.69:0,10,98
chr10	104708914	.	GA	G	1643.99	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=7.405;DP=465;FS=21.256;HRun=17;HaplotypeScore=67.7630;InbreedingCoeff=0.8291;MQ=46.56;MQ0=6;MQRankSum=-5.265;QD=11.03;ReadPosRankSum=-0.322;VQSLOD=1.3387;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:24:45.09:0,45,565	1/1:7,1:8:8.88:74,9,0	0/0:9,0:5:12.04:0,12,167	0/0:5,0:3:9.01:0,9,106	0/0:26,0:25:60.09:0,60,736	1/1:16,0:16:33.84:321,34,0	1/1:19,0:17:13.18:62,13,0	1/1:23,9:30:41.23:458,41,0	0/0:13,0:13:36.12:0,36,476	0/0:18,0:18:42.14:0,42,572	0/0:15,0:15:30.05:0,30,380	0/0:13,0:13:25.02:0,25,285	0/0:13,0:13:35.89:0,36,415	0/0:11,0:11:30.67:0,31,361	0/0:21,0:21:56.45:0,56,589	0/0:18,0:18:35.68:0,36,427	0/0:31,0:27:55.89:0,56,642	0/0:25,0:21:44.19:0,44,505	1/1:9,12:20:55.56:493,56,0	0/1:13,0:14:17.55:99,0,18	1/1:2,4:6:15.04:165,15,0	0/0:17,0:17:42.09:0,42,533	0/0:17,0:16:29.55:0,30,349	0/0:14,0:12:27.53:0,28,346	0/1:15,0:15:0.90:71,0,1	0/0:16,0:15:35.58:0,36,439	1/1:17,1:18:12.88:96,13,0	0/0:5,0:5:15:0,15,181
chr10	104708915	.	A	AAAG	2449.04	PASS	AB=0.674;AC=15;AF=0.268;AN=56;BaseQRankSum=5.239;DP=471;FS=23.382;HRun=0;HaplotypeScore=92.4652;InbreedingCoeff=0.7532;MQ=46.80;MQ0=6;MQRankSum=-5.355;QD=16.01;ReadPosRankSum=-0.278;VQSLOD=1.6452;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:25:44.84:0,45,702	1/1:1,7:8:9.03:182,9,0	0/0:9,0:5:12.04:0,12,176	0/0:5,0:3:9.03:0,9,125	0/0:26,0:25:62.54:0,63,883	1/1:12,0:16:32.97:279,33,0	0/1:12,0:17:10.94:33,0,11	1/1:34,0:32:41.19:605,41,0	0/0:14,0:14:36.12:0,36,577	0/0:18,0:18:42.14:0,42,665	0/0:15,0:15:30.06:0,30,432	0/0:13,0:13:25.03:0,25,328	0/0:13,0:13:35.94:0,36,516	0/0:11,0:11:30.14:0,30,394	0/0:21,0:21:56.42:0,56,684	0/0:18,0:18:36.14:0,36,484	0/0:32,0:27:58.72:0,59,776	0/0:25,0:21:45.75:0,46,563	1/1:20,2:21:56.14:785,56,0	0/1:5,9:14:3.59:169,0,4	1/1:4,1:6:15.05:260,15,0	0/0:17,0:17:42.10:0,42,662	0/0:17,0:16:32.66:0,33,464	0/0:14,0:12:29.75:0,30,449	0/1:8,0:15:5.45:42,0,5	0/0:16,0:15:35.58:0,36,538	1/1:5,12:19:14.82:284,15,0	0/0:5,0:5:15:0,15,221
chr10	104712449	.	C	CACAG	3503.47	PASS	AB=0.737;AC=11;AF=0.196;AN=56;BaseQRankSum=-4.444;DP=566;FS=2.714;HRun=0;HaplotypeScore=99.1573;InbreedingCoeff=0.8489;MQ=62.41;MQ0=5;MQRankSum=-4.969;QD=31.28;ReadPosRankSum=-1.277;VQSLOD=3.5217;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:48.15:0,48,748	1/1:2,3:5:9.03:216,9,0	0/0:36,0:28:18.03:0,18,263	0/0:35,0:32:35.13:0,35,470	0/0:28,0:28:66.20:0,66,1011	0/0:18,0:18:30.02:0,30,412	0/0:18,0:18:42.11:0,42,629	1/1:27,2:28:30.02:461,30,0	0/0:19,0:19:48.15:0,48,741	0/0:11,0:11:12.03:0,12,173	0/0:13,0:13:24.08:0,24,386	0/0:15,0:15:27.07:0,27,410	0/0:10,0:10:27.07:0,27,401	0/0:11,0:11:18.06:0,18,287	0/0:24,0:24:66.21:0,66,1040	0/0:16,0:16:36.11:0,36,556	0/0:42,0:42:68.89:0,69,1107	0/0:24,0:24:42.14:0,42,676	0/1:9,5:12:30.24:343,0,30	1/1:9,13:22:42.14:1008,42,0	1/1:15,8:22:21.07:505,21,0	0/0:12,0:12:33.09:0,33,485	0/0:13,0:13:24.08:0,24,384	0/0:34,0:34:57.16:0,57,855	0/0:19,0:19:45.04:0,45,645	0/0:20,0:20:36.12:0,36,578	1/1:9,10:19:45.10:970,45,0	0/0:7,0:7:8.57:0,9,188
chr10	104712505	.	T	TA	2210.15	PASS	AB=0.704;AC=16;AF=0.286;AN=56;BaseQRankSum=-7.571;DP=454;FS=8.790;HRun=11;HaplotypeScore=49.7339;InbreedingCoeff=0.6671;MQ=62.12;MQ0=9;MQRankSum=-1.597;QD=13.64;ReadPosRankSum=-1.956;VQSLOD=2.4239;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:53.79:0,54,418	1/1:2,1:3:2.53:30,3,0	0/0:19,0:13:20.86:0,21,158	0/0:10,0:5:8.78:0,9,56	0/0:30,0:29:68.67:0,69,529	1/1:1,15:16:39.08:396,39,0	0/1:6,7:12:2.40:135,0,2	1/1:11,19:29:10.60:460,11,0	0/0:14,0:14:38.83:0,39,298	0/0:18,0:18:37.96:0,38,300	0/0:10,0:10:17.88:0,18,137	0/0:9,0:10:19.95:0,20,145	0/0:11,0:11:29.89:0,30,232	0/0:9,0:8:17.91:0,18,139	0/0:16,0:16:28.91:0,29,215	0/0:14,0:14:32.83:0,33,251	0/0:32,0:34:98.76:0,99,737	0/0:21,0:21:47.22:0,47,360	1/1:6,10:16:27.05:273,27,0	1/1:10,10:19:12.85:301,13,0	0/1:4,11:15:52.98:236,0,53	0/0:9,0:9:17.92:0,18,138	0/0:9,0:7:12.51:0,13,125	0/0:21,0:21:50.74:0,51,390	0/1:5,6:10:8.10:107,0,8	0/1:15,1:16:0.57:1,0,179	1/1:8,14:22:27.89:453,28,0	0/0:10,0:11:19.94:0,20,145
chr10	104712711	.	TA	T	702.68	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=2.185;DP=423;FS=13.348;HRun=9;HaplotypeScore=57.9933;InbreedingCoeff=0.7413;MQ=69.84;MQ0=3;MQRankSum=1.688;QD=11.52;ReadPosRankSum=-0.341;VQSLOD=1.1181;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,1426	0/0:6,0:6:18.05:0,18,208	0/0:25,0:10:12.41:0,12,177	0/1:20,0:13:26.56:27,0,82	0/0:14,0:14:39.11:0,39,447	1/1:1,16:17:42.02:384,42,0	1/1:3,8:11:24.01:220,24,0	0/0:34,0:34:84.61:0,85,920	0/0:10,0:10:27.08:0,27,312	0/0:9,0:9:21.06:0,21,242	0/0:9,0:9:24.07:0,24,276	0/0:6,0:6:18.04:0,18,198	0/0:10,0:10:30.09:0,30,346	0/0:5,0:5:12.04:0,12,138	0/0:11,0:11:27.07:0,27,303	0/0:9,0:9:21.05:0,21,234	0/0:37,0:37:99:0,99,1117	0/0:25,0:25:69.21:0,69,797	0/0:20,0:18:48.12:0,48,541	0/0:13,0:13:30.05:0,30,325	0/0:12,0:12:30.09:0,30,346	0/0:2,0:2:3.01:0,3,35	0/0:3,0:3:6.01:0,6,63	0/0:9,0:9:20.98:0,21,225	1/1:2,11:13:24:220,24,0	0/0:19,0:19:48.07:0,48,527	0/0:19,0:19:51.07:0,51,543	0/0:13,0:13:33.10:0,33,381
chr10	104714255	.	T	TA	4201.23	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-10.683;DP=635;FS=10.281;HRun=11;HaplotypeScore=70.4490;InbreedingCoeff=0.8814;MQ=62.50;MQ0=0;MQRankSum=-0.085;QD=18.51;ReadPosRankSum=-1.697;VQSLOD=3.7184;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,116,894	1/1:2,8:10:15:153,15,0	0/0:14,0:12:29.32:0,29,205	0/0:7,0:6:8.76:0,9,64	0/0:25,0:25:25.35:0,25,339	1/1:3,17:20:45.09:457,45,0	1/1:2,19:21:24.86:434,25,0	1/1:17,18:34:33.84:506,34,0	0/0:22,0:22:53.77:0,54,418	0/0:26,0:26:56.75:0,57,439	0/0:16,0:16:35.78:0,36,271	0/0:29,0:29:71.62:0,72,551	0/0:13,1:14:5.40:0,5,223	0/0:23,0:23:50.72:0,51,391	0/0:30,0:30:68.66:0,69,529	0/0:20,0:20:44.80:0,45,348	0/0:24,0:25:64.76:0,65,490	0/0:16,0:17:39.71:0,40,304	1/1:15,19:34:63.79:602,64,0	1/1:3,26:30:74.91:724,75,0	1/1:2,14:16:45.03:444,45,0	0/0:28,0:28:71.27:0,71,555	0/0:26,0:26:70.43:0,70,537	0/0:14,1:15:8.35:0,8,248	1/1:6,19:25:24.86:434,25,0	0/0:28,0:28:71.71:0,72,557	1/1:8,17:25:41.84:426,42,0	0/1:10,0:10:22.38:22,0,115
chr10	104719765	.	ATG	A	119.77	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=5.185;DP=902;FS=8.057;HRun=0;HaplotypeScore=121.2468;InbreedingCoeff=0.8185;MQ=49.69;MQ0=62;MQRankSum=0.114;QD=2.66;ReadPosRankSum=0.071;VQSLOD=1.8317;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:40:89.20:0,89,1221	0/0:9,0:9:9:0,9,115	./.	./.	0/0:28,0:26:49.40:0,49,747	1/1:8,4:12:6.02:75,6,0	0/0:15,18:28:0:0,0,0	0/0:95,0:62:99:0,107,1430	0/0:29,0:29:69.10:0,69,1046	0/0:44,0:38:73.05:0,73,1288	0/0:33,0:32:63.13:0,63,980	0/0:31,0:28:45.11:0,45,639	0/0:26,0:25:57.08:0,57,814	0/0:26,1:26:57.06:0,57,893	0/0:44,0:41:81.27:0,81,1276	0/0:49,0:48:99:0,108,1723	0/0:36,0:34:34.79:0,35,1017	0/0:23,0:23:12.74:0,13,632	0/0:31,0:22:26.61:0,27,329	0/0:27,0:23:30.03:0,30,412	0/0:71,0:61:75.14:0,75,1072	0/0:19,0:18:35.19:0,35,509	0/0:23,0:22:51.17:0,51,810	0/0:43,0:43:85.27:0,85,1227	1/1:20,13:29:10.59:148,11,0	0/0:33,0:26:65.56:0,66,877	0/0:28,0:28:16.68:0,17,516	0/0:19,0:19:43.69:0,44,733
chr10	104719779	.	GTA	G	174.21	PASS	AB=0.967;AC=7;AF=0.135;AN=52;BaseQRankSum=8.831;DP=885;FS=16.993;HRun=0;HaplotypeScore=136.2955;InbreedingCoeff=0.4021;MQ=48.43;MQ0=79;MQRankSum=0.009;QD=1.64;ReadPosRankSum=-4.244;VQSLOD=0.0822;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:49:24.76:0,25,1190	0/0:6,0:6:5.99:0,6,50	./.	./.	0/0:27,0:24:6.09:0,6,659	1/1:5,6:11:8.74:53,9,0	0/0:39,0:32:2.68:0,3,19	0/0:98,0:56:59.69:0,60,1160	0/0:32,0:32:73.74:0,74,1207	0/0:42,0:37:13.06:0,13,1236	0/0:30,0:29:65.23:0,65,1053	0/0:32,0:29:59.78:0,60,793	0/0:25,0:24:60.39:0,60,819	0/0:26,0:25:42.59:0,43,958	0/0:44,0:38:86.38:0,86,1236	0/0:54,0:53:99:0,111,1934	0/0:41,0:39:54.24:0,54,1254	0/0:23,0:23:26.12:0,26,751	0/1:21,0:13:24.50:24,0,304	0/1:20,0:17:38.59:39,0,347	0/0:68,1:58:26.64:0,27,812	0/0:23,0:22:44.94:0,45,636	0/0:23,0:22:56.93:0,57,897	0/0:39,0:39:89.71:0,90,1438	1/1:25,1:22:24.82:150,25,0	0/0:35,0:25:55.20:0,55,925	0/1:24,3:27:42.06:42,0,521	0/0:17,1:17:25.49:0,25,713
chr10	104719803	.	GTGTGTGTGTGTGTA	G	1387.70	PASS	AB=0.960;AC=9;AF=0.173;AN=52;BaseQRankSum=7.709;DP=882;FS=2.663;HRun=0;HaplotypeScore=301.7104;InbreedingCoeff=0.0808;MQ=48.04;MQ0=76;MQRankSum=-3.627;QD=5.24;ReadPosRankSum=-4.490;VQSLOD=1.6570;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:53:99:0,100,2732	0/0:8,0:8:6.42:0,6,65	./.	./.	0/0:28,0:25:32.88:0,33,884	0/1:11,0:11:31.04:31,0,89	0/0:42,0:35:21.49:0,21,271	0/1:59,39:65:46.76:826,0,47	0/0:35,0:35:59.06:0,59,1763	0/0:39,0:34:56.48:0,56,1573	0/0:22,0:21:35.76:0,36,765	0/0:36,0:33:44.35:0,44,1299	0/0:24,0:23:26.24:0,26,1203	0/0:28,0:27:52.60:0,53,1297	0/0:47,0:41:44.50:0,44,2049	0/0:57,0:56:69.79:0,70,3230	0/0:45,0:43:84.78:0,85,2006	0/0:25,0:25:36.95:0,37,1103	0/1:19,0:9:13.46:142,0,13	0/1:20,0:15:47.10:157,0,47	1/1:52,0:39:22.84:216,23,0	0/0:25,0:24:24.87:0,25,781	0/0:20,0:19:12.92:0,13,889	0/0:44,0:44:66.87:0,67,2472	0/1:25,0:21:0.70:1,0,243	0/0:29,0:21:17.27:0,17,1225	0/1:25,0:24:99:139,0,271	0/1:13,0:12:12.47:12,0,322
chr10	104719815	.	GTA	G	1374.20	PASS	AB=0.977;AC=12;AF=0.214;AN=56;BaseQRankSum=11.686;DP=855;FS=0.000;HRun=0;HaplotypeScore=133.1641;InbreedingCoeff=0.2890;MQ=48.79;MQ0=63;MQRankSum=-5.461;QD=5.29;ReadPosRankSum=-3.454;VQSLOD=2.3681;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:58:62.60:0,63,1455	0/0:10,0:10:11.71:0,12,81	0/0:8,0:1:3.01:0,3,32	0/1:18,0:9:8.35:8,0,41	0/0:26,0:23:4.87:0,5,476	0/1:14,0:14:31.14:31,0,117	0/0:37,0:31:22.03:0,22,235	1/1:80,0:57:8.76:631,9,0	0/0:35,0:35:24.87:0,25,996	0/0:31,0:27:37.31:0,37,813	0/0:20,0:19:4.46:0,4,343	0/0:38,0:35:2.31:0,2,755	0/0:23,0:23:2.38:0,2,534	0/0:28,0:27:45.12:0,45,704	0/0:45,0:41:36.21:0,36,1039	0/0:52,0:51:9.07:0,9,1153	0/0:42,0:40:78.99:0,79,1044	0/0:27,0:27:52.98:0,53,781	0/1:20,0:12:3.02:188,0,3	0/1:18,0:14:16.04:150,0,16	1/1:46,0:34:38.69:292,39,0	0/0:24,0:23:16.92:0,17,441	0/0:19,0:17:8.56:0,9,330	0/0:48,0:48:92.69:0,93,1464	0/0:22,0:19:4.88:0,5,202	0/1:27,3:22:2.85:3,0,563	1/1:19,3:21:30.92:206,31,0	0/1:11,0:10:20.70:21,0,85
chr10	104723063	.	T	TG	2085.67	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=9.530;DP=489;FS=2.843;HRun=0;HaplotypeScore=51.3511;InbreedingCoeff=0.9060;MQ=53.28;MQ0=12;MQRankSum=-11.026;QD=17.83;ReadPosRankSum=-0.838;VQSLOD=5.3607;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:54.18:0,54,754	1/1:0,8:8:24.01:349,24,0	0/0:23,0:9:24.08:0,24,335	0/0:19,0:10:30.04:0,30,383	0/0:14,0:13:36.11:0,36,486	1/1:1,15:15:21.07:324,21,0	1/1:0,10:2:5.95:65,6,0	1/1:3,3:2:3.01:45,3,0	0/0:26,0:26:75.24:0,75,1034	0/0:23,0:23:69.23:0,69,964	0/0:10,0:10:30.09:0,30,405	0/0:19,0:19:51.17:0,51,712	0/0:21,0:19:48.16:0,48,670	0/0:24,1:24:72.20:0,72,967	0/0:28,0:28:81.27:0,81,1132	0/0:25,0:25:69.23:0,69,961	0/0:21,0:20:57.19:0,57,797	0/0:30,0:30:78.23:0,78,1057	1/1:6,8:8:18.06:276,18,0	1/1:1,7:8:17.98:255,18,0	1/1:2,16:13:3.01:48,3,0	0/0:14,0:14:42.14:0,42,587	0/0:9,0:9:24.08:0,24,335	0/0:22,0:22:63:0,63,862	1/1:1,15:16:30.03:426,30,0	0/0:19,0:18:51.16:0,51,685	1/1:2,19:20:33.06:497,33,0	0/0:2,0:2:6.02:0,6,84
chr10	104727713	.	G	GA	714.36	PASS	AB=0.588;AC=9;AF=0.161;AN=56;BaseQRankSum=-4.755;DP=303;FS=21.248;HRun=0;HaplotypeScore=42.2088;InbreedingCoeff=0.6904;MQ=83.33;MQ0=0;MQRankSum=1.268;QD=9.79;ReadPosRankSum=-0.731;VQSLOD=1.4145;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.27:0,54,432	0/0:6,0:6:18:0,18,156	0/0:13,0:13:32.54:0,33,335	0/0:12,0:12:9.64:0,10,161	0/0:11,0:11:17.97:0,18,152	0/0:10,0:10:23.30:0,23,170	0/0:16,0:16:35.87:0,36,297	1/1:5,14:20:44.49:350,44,0	0/0:5,0:5:14.96:0,15,123	0/0:5,0:5:11.96:0,12,111	0/0:5,0:5:14.95:0,15,122	0/0:11,0:11:26.77:0,27,205	0/0:6,0:6:14.94:0,15,119	0/0:9,0:9:20.93:0,21,171	0/0:11,0:11:20.76:0,21,164	0/0:10,0:10:20.07:0,20,174	0/0:20,0:20:53.96:0,54,472	0/0:11,0:11:4.98:0,5,156	1/1:6,13:19:15.49:330,15,0	1/1:0,12:12:14.83:114,15,0	1/1:3,9:12:2.52:38,3,0	0/0:5,0:5:14.95:0,15,121	0/0:12,0:12:32.93:0,33,285	0/0:20,0:20:50.90:0,51,420	0/0:6,0:6:8.91:0,9,69	0/0:4,0:4:8.96:0,9,72	0/1:3,7:10:11.66:34,0,12	0/0:1,0:1:3:0,3,26
chr10	104728198	.	TTTG	T	958.26	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=-0.074;DP=326;FS=0.000;HRun=0;HaplotypeScore=49.5015;InbreedingCoeff=0.6126;MQ=70.56;MQ0=23;MQRankSum=-3.026;QD=6.94;ReadPosRankSum=-5.914;VQSLOD=0.1176;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:35:69.63:0,70,1010	1/1:4,0:4:9.87:83,10,0	0/0:33,0:13:19.73:0,20,214	0/0:26,0:9:11.12:0,11,71	0/0:10,0:8:20.82:0,21,266	1/1:6,2:8:17.95:176,18,0	1/1:1,5:6:6.01:66,6,0	1/1:20,1:20:33.01:332,33,0	0/0:2,0:2:2.68:0,3,34	0/0:6,0:6:15.44:0,15,200	0/0:8,0:7:12.45:0,12,122	0/1:15,0:15:9.85:10,0,276	0/0:5,0:5:7.97:0,8,60	0/1:5,0:3:0.92:1,0,21	0/0:6,0:6:10.49:0,10,58	0/0:9,0:9:1.04:0,1,217	0/1:19,0:15:5.19:5,0,202	0/0:20,0:18:21.50:0,21,455	1/1:14,0:11:13.34:102,13,0	1/1:5,0:3:6.37:38,6,0	1/1:9,0:9:15.63:85,16,0	0/0:4,0:4:11.63:0,12,170	0/0:5,0:5:14.84:0,15,173	0/1:11,0:10:11.34:11,0,168	1/1:5,12:16:14.94:154,15,0	0/0:9,0:9:22.76:0,23,225	1/1:4,0:4:11.89:88,12,0	0/0:7,0:7:12.27:0,12,109
chr10	104729190	.	C	CAGAGGCG	361.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.044;DP=753;FS=2.051;HRun=0;HaplotypeScore=171.0044;InbreedingCoeff=0.9668;MQ=61.25;MQ0=2;MQRankSum=-3.340;QD=45.13;ReadPosRankSum=0.324;VQSLOD=3.2363;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:81.26:0,81,1812	1/1:3,4:8:12.04:447,12,0	0/0:34,0:30:48.44:0,48,950	0/0:35,0:24:44.69:0,45,854	0/0:19,0:19:27.09:0,27,579	0/0:29,0:29:84.29:0,84,1864	0/0:27,0:27:66.23:0,66,1487	0/0:29,0:29:45.15:0,45,863	0/0:24,0:24:63.22:0,63,1427	0/0:26,0:26:42.14:0,42,917	0/0:20,0:20:48.15:0,48,1085	0/0:26,0:26:57.20:0,57,1343	0/0:19,0:19:54.16:0,54,1113	0/0:22,0:22:57.18:0,57,1296	0/0:28,0:27:60.19:0,60,1287	0/0:39,0:39:90.31:0,90,2084	0/0:35,0:35:84.29:0,84,1898	0/0:35,0:35:84.23:0,84,1770	0/0:27,0:27:45.15:0,45,883	0/0:21,0:21:39.13:0,39,861	0/0:41,0:41:81.28:0,81,1891	0/0:21,0:21:42.14:0,42,931	0/0:25,0:25:39.08:0,39,733	0/0:27,0:27:69.24:0,69,1593	0/0:25,0:25:54.19:0,54,1273	0/0:26,0:26:48.14:0,48,1048	0/0:33,0:33:72.21:0,72,1574	0/0:14,0:14:30.10:0,30,707
chr10	104729317	.	T	TGAGGAAGGCTTCTG	12321.09	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=3.239;DP=722;FS=3.167;HRun=0;HaplotypeScore=277.4290;InbreedingCoeff=0.9939;MQ=89.24;MQ0=0;MQRankSum=-12.330;QD=89.93;ReadPosRankSum=-5.072;VQSLOD=3.5908;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,120,4571	0/0:9,0:9:18.06:0,18,714	0/0:32,0:32:43.72:0,44,1518	0/0:33,0:31:56.13:0,56,1421	0/0:17,0:17:42.62:0,43,1488	0/0:29,0:29:75.26:0,75,2647	0/0:30,0:30:78.25:0,78,2678	1/1:41,0:41:93.29:3586,93,0	0/0:19,0:19:51.18:0,51,1981	0/0:19,0:18:51.16:0,51,1624	0/0:13,0:13:36.12:0,36,1357	0/0:24,0:24:66.23:0,66,2314	0/0:13,0:13:24.08:0,24,897	0/0:26,0:26:66.23:0,66,2404	0/0:32,0:32:84.29:0,84,3171	0/0:34,0:34:96.33:0,96,3750	0/0:40,0:40:99:0,105,3784	0/0:32,0:32:73.13:0,73,2513	1/1:16,6:22:39.13:1629,39,0	1/1:10,12:22:49.05:2551,49,0	1/1:12,8:21:15.05:758,15,0	0/0:20,0:20:54.18:0,54,1868	0/0:21,0:21:45.14:0,45,1708	0/0:32,0:32:75.26:0,75,2743	0/0:21,0:21:54.19:0,54,1866	0/0:23,0:23:60.21:0,60,2162	1/1:14,15:31:60.21:3797,60,0	0/0:16,0:16:45.15:0,45,1681
chr10	104729331	.	GA	G	693.55	PASS	AB=0.891;AC=3;AF=0.054;AN=56;BaseQRankSum=6.325;DP=697;FS=3.917;HRun=1;HaplotypeScore=97.4701;InbreedingCoeff=-0.0567;MQ=88.54;MQ0=0;MQRankSum=-5.282;QD=9.37;ReadPosRankSum=-3.542;VQSLOD=-0.0173;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,2154	0/0:8,0:8:24.08:0,24,384	0/0:32,0:32:93.75:0,94,1389	0/0:31,0:29:74.41:0,74,1059	0/0:19,0:19:54.18:0,54,861	0/0:29,0:29:87.28:0,87,1344	0/0:32,0:32:90.29:0,90,1415	0/1:21,20:41:99:696,0,863	0/0:19,0:19:57.19:0,57,911	0/0:26,0:25:72.23:0,72,1112	0/0:14,0:14:42.14:0,42,671	0/0:24,0:24:72.24:0,72,1141	0/0:12,0:12:36.12:0,36,576	0/0:25,0:25:75.26:0,75,1199	0/0:31,0:31:93.30:0,93,1463	0/0:37,0:37:99:0,111,1751	0/0:38,0:38:99:0,114,1786	0/0:32,0:32:93.32:0,93,1478	0/0:13,0:13:39.06:0,39,593	0/1:19,0:19:33.83:34,0,381	0/1:14,0:14:63.64:64,0,116	0/0:20,0:20:60.20:0,60,940	0/0:20,0:20:54.18:0,54,863	0/0:27,0:27:78.27:0,78,1235	0/0:19,0:19:57.19:0,57,909	0/0:25,0:25:75.26:0,75,1190	0/0:25,0:25:68.30:0,68,830	0/0:19,0:19:54.18:0,54,863
chr10	104729582	.	CTGTAAGTG	C	2376.76	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.323;DP=648;FS=0.000;HRun=0;HaplotypeScore=175.1581;InbreedingCoeff=0.9693;MQ=75.36;MQ0=0;MQRankSum=-8.654;QD=37.73;ReadPosRankSum=-2.219;VQSLOD=2.7618;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,111,4637	0/0:8,0:8:15.05:0,15,482	0/0:16,0:15:39.11:0,39,1431	0/0:25,0:25:61.12:0,61,2368	0/0:4,0:4:9.03:0,9,388	1/1:4,18:22:45.15:1219,45,0	1/1:7,11:18:20.99:569,21,0	0/0:38,0:38:87.54:0,88,4466	0/0:23,0:23:66.23:0,66,2729	0/0:23,0:23:63.22:0,63,2664	0/0:12,0:12:35.33:0,35,1430	0/0:31,0:31:84.25:0,84,3413	0/0:20,0:20:57.20:0,57,2449	0/0:10,0:10:18.06:0,18,765	0/0:32,0:32:87.30:0,87,3553	0/0:38,0:38:96.32:0,96,3758	0/0:31,0:31:81.28:0,81,3248	0/0:25,0:25:75.26:0,75,3048	0/0:24,0:24:66.20:0,66,2572	0/0:15,0:15:36.12:0,36,1238	0/0:43,0:43:99:0,108,4128	0/0:21,0:21:39.13:0,39,1626	0/0:18,0:18:41.74:0,42,1665	0/0:25,0:25:69.24:0,69,2867	1/1:14,9:23:27.09:730,27,0	0/0:22,0:22:60.21:0,60,2545	0/0:27,0:27:51.18:0,51,2141	0/0:12,0:12:36.12:0,36,1540
chr10	104729604	.	CTT	C	534.12	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.405;DP=622;FS=0.000;HRun=4;HaplotypeScore=106.2358;InbreedingCoeff=0.9617;MQ=67.87;MQ0=3;MQRankSum=-0.350;QD=10.27;ReadPosRankSum=0.213;VQSLOD=-0.3266;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:97.23:0,97,1120	0/0:9,0:9:17.28:0,17,92	0/0:15,0:12:30.04:0,30,303	0/0:28,0:23:59.63:0,60,571	0/0:7,0:7:18.04:0,18,277	1/1:19,6:25:14.91:355,15,0	1/1:11,5:16:17.98:213,18,0	0/0:37,0:37:84.87:0,85,880	0/0:24,0:24:60.85:0,61,773	0/0:20,0:20:60.08:0,60,699	0/0:16,0:16:34.28:0,34,443	0/0:33,0:33:74.03:0,74,981	0/0:17,0:17:51:0,51,535	0/0:10,0:10:23.30:0,23,302	0/0:29,0:29:66.02:0,66,938	0/0:28,0:28:58.59:0,59,915	0/0:31,0:30:54.99:0,55,913	0/0:26,0:26:61.82:0,62,740	0/0:25,0:25:70.11:0,70,503	0/0:14,0:14:27.02:0,27,179	0/0:48,0:48:98.21:0,98,718	0/0:17,0:17:44.62:0,45,463	0/0:18,0:18:37.37:0,37,454	0/0:23,0:23:51.23:0,51,729	1/1:9,2:11:8.99:99,9,0	0/0:23,0:23:57.02:0,57,794	0/0:21,0:21:43.46:0,43,303	0/0:13,0:13:31.91:0,32,481
chr10	104729607	.	TTGTGTG	T	1483.14	PASS	AB=1.000;AC=13;AF=0.250;AN=52;BaseQRankSum=7.146;DP=688;FS=9.689;HRun=0;HaplotypeScore=161.3425;InbreedingCoeff=0.8814;MQ=63.73;MQ0=4;MQRankSum=-3.760;QD=7.65;ReadPosRankSum=-0.276;VQSLOD=1.8253;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:48:65.39:0,65,1641	1/1:4,0:9:12.04:167,12,0	./.	./.	0/0:12,0:12:24.08:0,24,705	0/1:33,0:33:7.35:7,0,840	0/0:19,0:19:22.36:0,22,478	1/1:32,6:37:17.93:253,18,0	0/0:21,0:25:35.13:0,35,908	0/0:25,0:25:37.93:0,38,919	0/0:16,0:18:27.09:0,27,760	0/0:30,0:36:54.10:0,54,1238	0/0:21,0:21:27.09:0,27,677	0/0:14,0:14:23.41:0,23,562	0/0:26,0:30:54.63:0,55,1342	0/0:23,0:27:45.15:0,45,1233	0/0:25,0:31:48.14:0,48,1256	0/0:25,0:28:45.10:0,45,1062	1/1:20,10:30:18.22:375,18,0	1/1:5,9:15:23.96:349,24,0	1/1:32,16:48:14.25:243,14,0	0/0:16,0:18:20.25:0,20,530	0/0:19,0:23:31.87:0,32,883	0/0:20,0:24:39.13:0,39,1117	0/0:12,0:12:9.03:0,9,172	0/0:21,0:25:43.36:0,43,1104	1/1:10,9:21:15.05:268,15,0	0/0:15,0:17:27.09:0,27,744
chr10	104730592	.	TGTAGGGAAGACA	T	316.34	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.705;DP=592;FS=0.000;HRun=0;HaplotypeScore=201.3280;InbreedingCoeff=0.9683;MQ=93.79;MQ0=0;MQRankSum=-2.305;QD=63.27;ReadPosRankSum=0.623;VQSLOD=3.2422;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,6375	1/1:0,5:5:12.04:402,12,0	0/0:29,0:29:68.52:0,69,3390	0/0:31,0:31:84.56:0,85,3549	0/0:16,0:16:48.16:0,48,2414	0/0:21,0:20:63.22:0,63,3418	0/0:19,0:19:57.18:0,57,3116	0/0:21,0:21:63.20:0,63,3064	0/0:21,0:21:63.20:0,63,3582	0/0:17,0:17:48.16:0,48,2829	0/0:18,0:18:54.17:0,54,3007	0/0:26,0:26:78.25:0,78,4512	0/0:22,0:22:66.23:0,66,4118	0/0:20,0:20:60.21:0,60,3390	0/0:24,0:24:72.23:0,72,3993	0/0:32,0:32:96.30:0,96,5457	0/0:25,0:25:75.14:0,75,3966	0/0:20,0:20:60.21:0,60,3756	0/0:14,0:14:42.14:0,42,2254	0/0:12,0:12:36.11:0,36,2069	0/0:26,0:26:69.24:0,69,4296	0/0:20,0:20:54.18:0,54,2995	0/0:18,0:18:51.18:0,51,2680	0/0:30,0:30:87.30:0,87,5059	0/0:15,0:15:45.14:0,45,2555	0/0:17,0:17:48.16:0,48,2740	0/0:17,0:17:51.18:0,51,2476	0/0:14,0:14:36.12:0,36,2078
chr10	104731593	.	GAA	G	2330.46	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.310;DP=471;FS=2.072;HRun=11;HaplotypeScore=72.9897;InbreedingCoeff=0.9615;MQ=73.60;MQ0=0;MQRankSum=1.267;QD=25.89;ReadPosRankSum=-0.618;VQSLOD=3.6217;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:42:99:0,114,1694	0/0:6,0:6:15.05:0,15,231	0/0:12,0:11:12.21:0,12,187	0/0:10,0:10:7.63:0,8,127	0/0:11,0:11:30.10:0,30,461	0/0:3,0:16:32.44:0,32,111	0/0:2,0:32:72.24:0,72,248	1/1:1,23:24:69.17:734,69,0	0/0:10,0:11:29.59:0,30,420	0/0:19,0:19:52.01:0,52,743	0/0:8,0:8:19.86:0,20,260	0/0:17,0:18:41.61:0,42,568	0/0:12,0:13:35.57:0,36,466	0/0:10,0:11:32.60:0,33,470	0/0:13,0:13:36.12:0,36,554	0/0:22,0:22:57.18:0,57,854	0/0:23,0:24:68.20:0,68,983	0/0:24,0:25:68.72:0,69,1016	1/1:3,18:21:51.05:525,51,0	1/1:0,6:6:15.02:160,15,0	1/1:3,17:20:51.12:542,51,0	0/0:18,0:18:51.15:0,51,744	0/0:6,0:7:14.54:0,15,193	0/0:18,0:18:54.18:0,54,831	0/0:0,0:8:19.96:0,20,68	0/0:15,0:17:42.36:0,42,560	1/1:2,17:19:51.13:543,51,0	0/0:16,0:16:42.13:0,42,624
chr10	104733705	.	TGCTTAGAAGATCTAAGACTCA	T	6741.88	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.583;DP=622;FS=10.854;HRun=0;HaplotypeScore=336.3576;InbreedingCoeff=0.9818;MQ=82.84;MQ0=0;MQRankSum=-8.740;QD=84.27;ReadPosRankSum=-0.973;VQSLOD=3.0382;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,12257	0/0:14,0:14:42.14:0,42,3871	0/0:16,0:16:45.15:0,45,2904	0/0:23,0:23:63.22:0,63,4060	0/0:11,0:11:33.11:0,33,2776	0/0:17,0:17:48.16:0,48,3962	0/0:31,0:31:87.30:0,87,7247	1/1:10,14:24:40.29:1666,40,0	0/0:24,0:24:69.24:0,69,6180	0/0:22,0:22:60.21:0,60,5340	0/0:9,0:9:24.08:0,24,2168	0/0:34,0:34:99:0,99,9319	0/0:17,0:17:47.67:0,48,4471	0/0:16,0:16:45.15:0,45,4447	0/0:40,0:40:99:0,120,10439	0/0:35,0:35:99:0,105,8869	0/0:29,0:29:84.27:0,84,7668	0/0:26,0:26:75.26:0,75,6167	1/1:8,3:11:9.03:531,9,0	1/1:1,9:10:27.09:1565,27,0	1/1:8,17:25:42.13:2097,42,0	0/0:16,0:16:48.16:0,48,4211	0/0:24,0:24:72.25:0,72,6929	0/0:29,0:29:87.29:0,87,7422	0/0:18,0:18:48.16:0,48,4053	0/0:32,0:32:96.32:0,96,8737	1/1:5,5:10:15.05:884,15,0	0/0:14,0:14:42.14:0,42,4056
chr10	104734115	.	GGTGTGTGT	G	917.98	PASS	AB=0.929;AC=7;AF=0.135;AN=52;BaseQRankSum=4.936;DP=691;FS=2.052;HRun=0;HaplotypeScore=169.9332;InbreedingCoeff=0.7533;MQ=64.94;MQ0=9;MQRankSum=-6.033;QD=9.98;ReadPosRankSum=0.408;VQSLOD=2.9115;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:65.74:0,66,1765	0/0:11,0:10:3.01:0,3,88	./.	./.	0/0:17,0:17:24.05:0,24,619	1/1:18,9:28:15.05:330,15,0	1/1:21,4:25:20.99:388,21,0	0/0:35,0:32:31.91:0,32,693	0/0:23,0:30:33.58:0,34,985	0/0:17,0:17:33.11:0,33,1179	0/0:11,0:12:15.05:0,15,405	0/0:18,0:22:39.13:0,39,1294	0/0:21,0:21:33.11:0,33,983	0/0:29,0:29:33.09:0,33,1080	0/0:33,0:37:46.10:0,46,1209	0/1:24,1:26:20.97:21,0,1362	0/0:30,0:30:46.40:0,46,1462	0/0:28,0:27:45.15:0,45,1284	0/0:14,0:13:9.92:0,10,288	0/0:12,0:16:15.11:0,15,172	0/0:53,0:51:53.96:0,54,1494	0/0:29,0:29:48.16:0,48,1545	0/0:15,0:15:21.07:0,21,756	0/0:43,0:43:63.22:0,63,1873	1/1:6,6:12:15.05:321,15,0	0/0:17,0:17:24.06:0,24,553	0/0:18,0:17:24.08:0,24,671	0/0:10,0:13:24.96:0,25,670
chr10	104734625	.	AG	A	301.29	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.589;DP=621;FS=1.178;HRun=4;HaplotypeScore=65.0958;InbreedingCoeff=0.9994;MQ=87.84;MQ0=3;MQRankSum=-2.101;QD=25.11;ReadPosRankSum=0.850;VQSLOD=2.4021;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1473	1/1:0,12:12:33.10:396,33,0	0/0:24,0:24:66.21:0,66,906	0/0:23,0:22:63.21:0,63,871	0/0:18,0:18:48.15:0,48,655	0/0:25,0:25:75.25:0,75,1044	0/0:27,0:27:81.26:0,81,1117	0/0:41,0:41:99:0,111,1531	0/0:21,0:21:63.21:0,63,882	0/0:17,0:16:51.17:0,51,714	0/0:16,0:16:42.14:0,42,588	0/0:15,0:15:45.11:0,45,607	0/0:21,0:21:63.19:0,63,863	0/0:13,0:13:39.12:0,39,529	0/0:29,0:29:87.28:0,87,1201	0/0:32,0:32:93.30:0,93,1287	0/0:33,0:33:99:0,99,1384	0/0:27,0:27:81.27:0,81,1133	0/0:17,0:17:45.11:0,45,607	0/0:17,0:16:45.15:0,45,630	0/0:24,0:22:57.19:0,57,796	0/0:14,0:14:42.14:0,42,588	0/0:16,0:16:45.15:0,45,630	0/0:27,0:27:78.26:0,78,1091	0/0:14,0:14:36.11:0,36,488	0/0:18,0:18:51.16:0,51,684	0/0:23,0:23:60.20:0,60,839	0/0:18,0:18:51.17:0,51,714
chr10	104734683	.	T	TG	4401.35	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-8.393;DP=588;FS=1.754;HRun=3;HaplotypeScore=64.0600;InbreedingCoeff=0.9984;MQ=86.46;MQ0=3;MQRankSum=-5.085;QD=35.21;ReadPosRankSum=-2.317;VQSLOD=4.5073;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,1257	0/0:10,0:10:30.09:0,30,359	0/0:32,0:32:92.95:0,93,1034	0/0:26,0:26:66.65:0,67,755	0/0:20,0:20:48.11:0,48,551	0/0:20,0:20:57.15:0,57,670	0/0:20,0:20:54.15:0,54,635	1/1:2,41:41:99:1505,117,0	0/0:15,0:15:39.05:0,39,428	0/0:16,0:15:45.14:0,45,539	0/0:16,0:16:42.60:0,43,504	0/0:19,0:19:57.12:0,57,667	0/0:15,0:15:45.14:0,45,540	0/0:11,0:11:30.09:0,30,360	0/0:20,0:20:57.17:0,57,684	0/0:29,0:29:87.27:0,87,1043	0/0:41,0:41:99:0,120,1409	0/0:25,0:25:69.21:0,69,827	1/1:4,8:12:36.12:499,36,0	1/1:3,11:13:33.11:457,33,0	1/1:3,32:33:87.22:1193,87,0	0/0:8,0:8:21.06:0,21,248	0/0:14,0:14:39.02:0,39,431	0/0:27,0:27:72.20:0,72,850	0/0:14,0:14:42.12:0,42,492	0/0:17,0:17:48.15:0,48,575	1/1:2,19:21:54.18:748,54,0	0/0:10,0:10:27.07:0,27,311
chr10	104734762	.	A	AGCTTGTT	9123.53	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=1.365;DP=506;FS=1.513;HRun=0;HaplotypeScore=124.7621;InbreedingCoeff=0.9566;MQ=79.61;MQ0=0;MQRankSum=-11.841;QD=83.70;ReadPosRankSum=-6.332;VQSLOD=3.7959;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:96.33:0,96,2303	0/0:9,0:9:27.09:0,27,674	0/0:17,0:17:32.08:0,32,858	0/0:15,0:15:2.94:0,3,573	0/0:21,0:21:51.17:0,51,1237	0/0:17,0:17:42.14:0,42,1039	0/0:20,0:20:54.19:0,54,1339	1/1:24,16:38:96.30:3129,96,0	0/0:10,0:10:24.08:0,24,599	0/0:15,0:15:45.15:0,45,1042	0/0:8,0:8:21.07:0,21,524	0/0:13,0:13:39.13:0,39,907	0/0:16,0:16:45.15:0,45,1113	0/0:8,0:8:21.07:0,21,524	0/0:20,0:20:54.19:0,54,1348	0/0:18,0:18:42.14:0,42,1024	0/0:36,0:36:99:0,102,2490	0/0:13,0:13:33.11:0,33,823	1/1:11,4:15:42.13:1438,42,0	1/1:6,18:24:72.22:2543,72,0	1/1:11,3:14:24.08:879,24,0	0/0:11,0:11:27.09:0,27,674	0/0:13,0:13:36.08:0,36,844	0/0:16,0:16:45.15:0,45,1124	0/0:16,0:16:42.13:0,42,999	0/0:17,0:17:42.14:0,42,1049	1/1:9,6:16:33.11:1134,33,0	0/0:29,0:29:87.30:0,87,2170
chr10	104734796	.	CT	C	1040.66	PASS	AB=0.939;AC=13;AF=0.232;AN=56;BaseQRankSum=10.285;DP=479;FS=6.524;HRun=12;HaplotypeScore=73.5183;InbreedingCoeff=0.7169;MQ=65.59;MQ0=3;MQRankSum=-1.910;QD=8.60;ReadPosRankSum=-1.225;VQSLOD=2.3609;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,2:39:51.92:0,52,707	0/0:3,0:12:20:0,20,106	0/1:17,0:11:3.87:4,0,39	0/0:10,0:7:4.11:0,4,63	0/0:19,0:19:51.06:0,51,492	0/0:20,0:21:38.23:0,38,414	0/0:12,1:13:6.81:0,7,245	1/1:12,16:26:46.57:369,47,0	0/0:12,0:12:30.05:0,30,299	0/0:17,0:17:33.07:0,33,335	0/1:12,1:13:2.20:2,0,162	0/0:10,1:11:9.85:0,10,281	0/1:7,1:8:2.19:2,0,162	0/0:9,0:9:27.04:0,27,269	0/0:19,1:20:30.89:0,31,489	0/0:23,0:27:56.81:0,57,537	0/0:33,0:33:84.14:0,84,844	0/0:14,0:14:27:0,27,257	1/1:1,10:11:26.88:209,27,0	1/1:8,18:27:28.33:393,28,0	1/1:2,4:6:8.96:70,9,0	0/0:7,0:7:15.03:0,15,152	0/0:8,0:9:14.86:0,15,136	0/0:12,0:12:21.04:0,21,213	0/0:15,2:17:39.07:0,39,390	0/0:21,1:23:33.75:0,34,504	1/1:4,7:11:20.87:162,21,0	0/0:28,3:31:14.36:0,14,653
chr10	104735184	.	T	TAA	851.54	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.462;DP=673;FS=1.378;HRun=0;HaplotypeScore=103.5789;InbreedingCoeff=0.9938;MQ=73.22;MQ0=0;MQRankSum=-2.105;QD=14.94;ReadPosRankSum=-1.691;VQSLOD=3.4671;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:73.86:0,74,1308	0/0:11,0:11:33.11:0,33,535	0/0:22,0:20:24.60:0,25,398	0/0:17,0:16:17.76:0,18,413	0/0:37,0:37:98.95:0,99,1508	1/1:4,6:20:24.91:249,25,0	1/1:3,20:24:40.79:523,41,0	0/0:36,0:36:99:0,107,1332	0/0:27,0:27:78.18:0,78,1110	0/0:33,0:33:93.27:0,93,1339	0/0:20,0:20:60.20:0,60,947	0/0:15,0:15:42.11:0,42,640	0/0:12,0:12:36.11:0,36,562	0/0:22,0:22:66.22:0,66,1051	0/0:31,0:31:93.30:0,93,1490	0/0:35,0:35:99:0,102,1599	0/0:25,0:25:72.18:0,72,1078	0/0:21,0:21:60.20:0,60,971	0/0:16,0:16:47.86:0,48,598	0/0:23,0:23:65.61:0,66,745	0/0:17,0:17:38.33:0,38,501	0/0:30,0:30:90.30:0,90,1439	0/0:24,0:24:66.22:0,66,1032	0/0:23,0:23:60.20:0,60,979	1/1:2,10:13:20.37:221,20,0	0/0:35,0:35:99:0,102,1611	0/0:25,0:25:54.11:0,54,659	0/0:29,0:29:87.28:0,87,1354
chr10	104735185	.	T	TA	2252.54	PASS	AB=0.755;AC=16;AF=0.286;AN=56;BaseQRankSum=3.719;DP=672;FS=1.217;HRun=12;HaplotypeScore=86.1816;InbreedingCoeff=0.6964;MQ=73.55;MQ0=0;MQRankSum=-1.213;QD=9.27;ReadPosRankSum=-4.675;VQSLOD=1.9336;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:52.32:0,52,474	0/0:11,0:12:28.87:0,29,203	0/0:21,0:19:8.53:0,9,91	0/0:18,0:17:15.19:0,15,160	0/1:31,3:37:12.09:12,0,394	1/1:20,0:20:26.26:181,26,0	1/1:23,0:23:40.03:208,40,0	1/1:9,28:37:18.32:627,18,0	0/0:26,0:26:62.39:0,62,444	0/1:26,3:29:2.21:2,0,386	0/0:19,1:20:18.44:0,18,290	0/0:15,0:15:32.71:0,33,234	0/0:12,0:12:32.80:0,33,240	0/0:21,0:22:61.67:0,62,441	0/0:31,0:31:83.48:0,83,613	0/0:32,2:34:61.95:0,62,550	0/0:22,2:24:30.37:0,30,380	0/0:21,0:21:56.65:0,57,416	0/1:6,10:16:7.50:249,0,7	1/1:4,18:23:44.72:394,45,0	0/1:4,11:16:7.81:246,0,8	0/0:29,0:31:74.73:0,75,532	0/0:24,0:24:50.63:0,51,368	0/0:23,0:23:68.52:0,69,494	1/1:18,0:18:32.80:179,33,0	0/0:36,0:36:86.19:0,86,624	1/1:4,20:24:19.94:346,20,0	0/0:28,0:29:50.73:0,51,411
chr10	104737234	.	CT	C	1390.18	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=6.500;DP=480;FS=17.850;HRun=13;HaplotypeScore=52.9616;InbreedingCoeff=0.6949;MQ=67.23;MQ0=2;MQRankSum=0.444;QD=9.65;ReadPosRankSum=-2.444;VQSLOD=0.4722;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:50.92:0,51,481	0/0:8,0:8:17.99:0,18,163	0/1:11,0:9:11.43:34,0,11	0/0:5,0:6:0:0,0,0	0/0:12,0:12:5.18:0,5,207	0/0:21,0:21:54.09:0,54,525	0/0:11,0:11:30.04:0,30,287	1/1:11,20:32:29.37:398,29,0	0/0:14,3:17:5.13:0,5,207	0/0:22,0:22:42.05:0,42,402	0/0:17,0:17:33.02:0,33,308	0/0:12,0:12:24.02:0,24,224	0/0:16,0:16:11.23:0,11,259	0/0:8,0:8:21.03:0,21,204	0/0:22,0:22:47.87:0,48,451	0/0:20,1:21:23.15:0,23,382	0/0:29,0:29:47.94:0,48,476	0/0:13,1:13:5.08:0,5,202	1/1:7,10:20:5.43:166,5,0	1/1:7,18:25:21.47:317,21,0	1/1:6,13:19:26.82:197,27,0	0/0:12,0:12:27.04:0,27,263	0/0:12,0:12:24.04:0,24,233	0/1:9,0:9:5.38:5,0,102	0/0:16,2:18:17.07:0,17,310	0/0:17,0:17:33.04:0,33,316	1/1:6,21:28:61.66:444,62,0	0/0:14,0:13:33.01:0,33,307
chr10	104737808	.	C	CGACTGTATTT	21962.89	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-7.941;DP=720;FS=5.562;HRun=0;HaplotypeScore=194.0675;InbreedingCoeff=0.9950;MQ=82.52;MQ0=0;MQRankSum=-16.075;QD=98.49;ReadPosRankSum=-2.000;VQSLOD=4.2637;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.28:0,93,2824	1/1:4,12:16:42.14:2045,42,0	0/0:25,0:25:66.21:0,66,1831	0/0:21,0:21:44.12:0,44,1279	0/0:19,0:19:48.16:0,48,1538	1/1:2,18:22:45.15:2146,45,0	1/1:6,15:25:27.09:1298,27,0	1/1:15,16:36:93.30:3943,93,0	0/0:23,0:23:69.24:0,69,2201	0/0:36,0:36:99:0,99,3106	0/0:27,0:27:78.25:0,78,2427	0/0:27,0:27:81.26:0,81,2467	0/0:24,0:24:69.24:0,69,2202	0/0:29,0:29:75.26:0,75,2267	0/0:35,0:35:99:0,105,3246	0/0:42,0:42:99:0,123,3770	0/0:24,0:24:63.22:0,63,2003	0/0:27,0:27:69.24:0,69,2154	1/1:3,12:21:60.14:2147,60,0	1/1:7,37:44:99:5043,111,0	1/1:5,4:10:12.04:477,12,0	0/0:19,0:19:51.18:0,51,1648	0/0:20,0:20:60.19:0,60,1825	0/0:17,0:17:45.15:0,45,1460	1/1:10,12:24:38.22:1763,38,0	0/0:37,0:37:99:0,99,2948	1/1:4,19:25:63.22:3101,63,0	0/0:13,0:13:39.13:0,39,1273
chr10	104739583	.	GAATA	G	1284	PASS	AB=0.937;AC=12;AF=0.240;AN=50;BaseQRankSum=7.016;DP=292;FS=6.152;HRun=0;HaplotypeScore=49.6611;InbreedingCoeff=0.5858;MQ=68.76;MQ0=1;MQRankSum=2.093;QD=12.23;ReadPosRankSum=-2.454;VQSLOD=1.5161;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:24.08:0,24,550	0/0:2,0:2:6.02:0,6,102	./.	./.	0/0:11,0:11:21.07:0,21,480	0/0:14,0:22:27.08:0,27,484	0/0:6,0:8:6.02:0,6,89	1/1:21,16:37:48.09:632,48,0	0/0:8,0:8:12.04:0,12,283	0/0:11,0:11:9.03:0,9,215	0/0:13,0:13:15.05:0,15,359	0/0:8,0:8:12.04:0,12,287	0/0:8,0:8:9.03:0,9,215	0/0:6,0:6:3.01:0,3,72	0/1:15,1:16:29.70:30,0,295	0/0:10,0:10:15.05:0,15,359	0/0:17,0:17:39.13:0,39,881	0/0:15,0:15:33.08:0,33,665	1/1:4,5:9:15.05:239,15,0	1/1:2,4:6:9.03:123,9,0	1/1:7,2:9:6.02:96,6,0	./.	0/0:4,0:4:6.02:0,6,144	0/0:2,0:2:3.01:0,3,72	0/0:2,0:7:15.05:0,15,269	0/0:10,0:10:12.04:0,12,287	1/1:6,7:14:21.06:315,21,0	0/1:13,1:14:11.64:12,0,753
chr10	104740160	.	TGGGCAGGC	T	857.08	PASS	AC=16;AF=0.308;AN=52;BaseQRankSum=7.546;DP=337;FS=3.983;HRun=0;HaplotypeScore=80.3156;InbreedingCoeff=0.7691;MQ=65.58;MQ0=1;MQRankSum=-5.360;QD=7.58;ReadPosRankSum=-1.495;VQSLOD=1.5569;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:32.80:0,33,451	1/1:3,0:3:9.02:155,9,0	0/0:12,0:9:17.83:0,18,370	0/0:17,0:14:25.12:0,25,714	0/0:1,0:1:2.80:0,3,13	1/1:5,0:5:3.01:60,3,0	1/1:26,0:26:6.02:99,6,0	1/1:7,0:6:11.92:88,12,0	0/0:12,0:12:35.49:0,35,1090	0/0:13,0:13:32.04:0,32,920	0/0:1,0:1:3.01:0,3,128	0/0:20,0:20:59.22:0,59,1231	0/0:9,0:9:26.99:0,27,729	0/0:7,0:7:20.72:0,21,422	0/0:4,0:4:9.03:0,9,335	0/0:7,0:7:18.06:0,18,686	0/0:31,0:31:87.06:0,87,2638	0/0:21,0:21:41.22:0,41,1808	1/1:2,5:7:15.02:258,15,0	1/1:0,3:3:5.91:87,6,0	1/1:12,42:51:6.49:152,6,0	0/0:4,0:4:6.02:0,6,210	./.	0/0:34,0:33:84.15:0,84,3032	1/1:8,0:8:10.09:131,10,0	0/0:10,0:10:21:0,21,474	./.	0/0:3,0:3:3.01:0,3,129
chr10	104740161	.	GGGCAGGCGGGCA	G	803.08	PASS	AB=1.000;AC=12;AF=0.231;AN=52;BaseQRankSum=6.330;DP=336;FS=2.075;HRun=0;HaplotypeScore=101.4557;InbreedingCoeff=0.4793;MQ=65.52;MQ0=2;MQRankSum=-5.401;QD=6.37;ReadPosRankSum=-0.266;VQSLOD=1.9243;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:38.89:0,39,928	1/1:3,0:3:9.02:243,9,0	0/0:12,0:9:18.06:0,18,470	0/1:17,0:13:5.54:6,0,1043	0/0:1,0:1:2.80:0,3,13	1/1:3,2:5:3.01:110,3,0	1/1:3,23:26:6.02:217,6,0	0/1:6,0:5:10.43:33,0,10	0/0:12,0:12:35.66:0,36,1570	0/0:12,0:12:32.04:0,32,1353	0/0:1,0:1:3.01:0,3,180	0/0:20,0:20:59.35:0,59,1902	0/0:9,0:9:26.99:0,27,1024	0/0:7,0:7:20.93:0,21,620	0/0:4,0:4:9.03:0,9,467	0/0:7,0:7:18.06:0,18,996	0/0:31,0:31:87.15:0,87,3801	0/0:21,0:21:45.29:0,45,2513	0/1:7,0:7:0.98:1,0,52	0/0:3,0:3:1.55:0,2,4	0/1:54,0:51:0.49:4,0,0	0/0:4,0:4:6.02:0,6,299	./.	0/0:33,0:32:84.19:0,84,4263	1/1:1,7:8:12.04:330,12,0	0/0:10,0:10:24.08:0,24,795	./.	0/0:3,0:3:3.01:0,3,182
chr10	104740173	.	A	AATG	603.87	PASS	AB=1.000;AC=7;AF=0.140;AN=50;BaseQRankSum=4.508;DP=344;FS=5.799;HRun=0;HaplotypeScore=63.8135;InbreedingCoeff=0.6503;MQ=60.62;MQ0=5;MQRankSum=-5.305;QD=13.72;ReadPosRankSum=-1.006;VQSLOD=2.3446;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:40.34:0,40,664	0/1:4,0:4:40.26:40,0,118	0/0:10,0:9:26.75:0,27,399	0/0:21,0:16:44.31:0,44,700	./.	1/1:5,1:6:9.92:202,10,0	1/1:24,1:25:9.03:200,9,0	0/0:7,0:6:12.04:0,12,223	0/0:11,0:11:33.11:0,33,609	0/0:11,0:10:27.09:0,27,503	0/0:1,0:1:3.01:0,3,56	0/0:19,0:19:57.19:0,57,1043	0/0:13,0:13:36.11:0,36,639	0/0:7,0:6:15.05:0,15,279	0/0:3,0:3:9.03:0,9,168	0/0:11,0:11:24.07:0,24,416	0/0:30,0:30:90.27:0,90,1643	0/0:24,0:24:32.40:0,32,1185	0/0:6,0:6:17.11:0,17,122	0/0:4,0:4:6.91:0,7,113	0/0:47,0:46:14.81:0,15,191	0/0:4,0:4:6.01:0,6,112	./.	0/0:34,0:33:99:0,99,1801	1/1:7,2:9:15.05:295,15,0	0/0:9,0:9:24.08:0,24,446	./.	0/0:3,0:3:9.03:0,9,168
chr10	104740841	.	CTTTCTCCTTTGGT	C	7008.07	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.386;DP=604;FS=2.245;HRun=0;HaplotypeScore=217.8284;InbreedingCoeff=0.9669;MQ=87.08;MQ0=0;MQRankSum=-10.380;QD=49.70;ReadPosRankSum=-0.163;VQSLOD=4.6863;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:90.31:0,90,5273	1/1:1,1:2:3.01:115,3,0	0/0:17,0:17:30.10:0,30,1658	0/0:35,0:34:75.73:0,76,3763	0/0:22,0:22:48.16:0,48,2944	1/1:2,13:15:39.13:1491,39,0	1/1:8,7:16:21.07:803,21,0	1/1:17,10:27:30.09:947,30,0	0/0:27,0:27:63.22:0,63,3674	0/0:29,0:29:75.26:0,75,4800	0/0:16,0:16:39.13:0,39,2439	0/0:19,0:19:45.15:0,45,2848	0/0:24,0:24:69.21:0,69,3528	0/0:13,0:13:27.09:0,27,1612	0/0:30,0:30:75.24:0,75,4385	0/0:32,0:32:87.30:0,87,5585	0/0:32,0:32:81.28:0,81,4545	0/0:16,0:16:48.16:0,48,2989	1/1:12,7:19:21.05:625,21,0	1/1:1,10:11:18.06:571,18,0	1/1:9,6:15:18.06:567,18,0	0/0:24,0:24:54.19:0,54,3267	0/0:21,0:21:54.16:0,54,3186	0/0:21,0:21:54.19:0,54,3461	1/1:3,9:12:18.06:628,18,0	0/0:32,0:32:93.32:0,93,5580	1/1:11,13:24:33.11:1262,33,0	0/0:15,0:15:36.06:0,36,1722
chr10	104741100	.	ATATGTGTGTGTGTGTGTGTG	A	4040.94	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=4.429;DP=373;FS=8.950;HRun=0;HaplotypeScore=202.9314;InbreedingCoeff=0.7461;MQ=71.06;MQ0=7;MQRankSum=-4.976;QD=50.51;ReadPosRankSum=-0.097;VQSLOD=2.2822;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:36.05:0,36,2352	0/0:1,0:3:8.20:0,8,75	0/0:22,0:15:32.25:0,32,425	0/0:26,0:23:43.22:0,43,1146	0/0:20,0:20:50.82:0,51,3803	0/0:11,0:17:8.17:0,8,1948	0/1:12,0:12:34.56:35,0,1168	1/1:18,0:18:38.25:429,38,0	0/0:11,0:11:26.87:0,27,1705	0/0:19,0:18:54.14:0,54,3338	0/0:10,0:10:27.08:0,27,1874	0/0:7,0:7:21.06:0,21,1229	0/0:11,0:11:33.11:0,33,2611	0/0:11,0:11:20.87:0,21,1111	0/0:16,0:16:42.13:0,42,2911	0/0:10,0:10:27.08:0,27,2112	0/0:11,0:11:29.97:0,30,1938	0/0:19,0:18:48.15:0,48,4067	1/1:0,10:10:30.01:737,30,0	1/1:0,12:12:24.01:1213,24,0	1/1:1,3:3:3.01:46,3,0	0/0:17,0:17:48.16:0,48,4224	0/0:12,0:12:33.10:0,33,2795	0/0:11,0:11:27.95:0,28,2388	0/1:9,0:11:1.85:2,0,1304	0/0:18,0:18:54.13:0,54,3237	1/1:4,9:13:33.04:1580,33,0	0/0:5,0:4:9:0,9,303
chr10	104741102	.	ATG	A	246.48	PASS	AB=0.911;AC=14;AF=0.292;AN=48;BaseQRankSum=6.578;DP=387;FS=2.417;HRun=0;HaplotypeScore=93.8745;InbreedingCoeff=0.2790;MQ=69.36;MQ0=9;MQRankSum=-3.199;QD=1.85;ReadPosRankSum=2.729;VQSLOD=1.8725;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:4.23:0,4,250	1/1:3,0:3:5.68:28,6,0	./.	./.	0/1:20,0:20:17.92:18,0,285	0/0:18,0:18:19.02:0,19,199	0/0:14,0:14:11.95:0,12,135	./.	0/0:12,0:12:14.95:0,15,163	0/1:19,3:21:14.22:14,0,262	0/0:10,0:10:12.04:0,12,180	0/0:8,0:8:5.98:0,6,47	0/1:11,1:12:13.08:13,0,197	0/1:9,2:11:21.15:21,0,102	0/0:19,0:19:4.18:0,4,333	0/0:12,0:12:26.98:0,27,354	0/1:11,2:13:39.28:39,0,244	0/0:20,0:19:4.22:0,4,460	1/1:10,0:10:8.52:42,9,0	1/1:12,0:12:19.89:98,20,0	./.	0/0:17,0:17:16.82:0,17,486	0/0:11,0:12:26.29:0,26,350	0/0:12,0:12:23.82:0,24,293	0/0:11,0:11:14.89:0,15,139	0/1:18,1:19:0.34:0,0,293	1/1:11,0:11:25.57:126,26,0	0/0:5,0:4:2.94:0,3,18
chr10	104741173	.	G	GT	1615.17	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=12.301;DP=447;FS=1.952;HRun=6;HaplotypeScore=107.6651;InbreedingCoeff=0.8527;MQ=55.80;MQ0=5;MQRankSum=-10.650;QD=9.61;ReadPosRankSum=-2.128;VQSLOD=1.0357;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:57.16:0,57,655	1/1:3,1:4:8:52,8,0	0/1:23,0:14:0.36:0,0,195	0/1:21,0:10:35.36:35,0,91	0/0:16,0:15:39.10:0,39,415	1/1:13,1:14:26.49:166,26,0	1/1:8,0:8:17.03:157,17,0	1/1:22,0:21:57.03:484,57,0	0/0:11,0:11:33.08:0,33,352	0/0:17,0:16:35.96:0,36,360	0/0:11,0:11:30.08:0,30,322	0/0:10,0:10:30.07:0,30,319	0/0:10,0:10:24.06:0,24,257	0/0:5,0:5:15.04:0,15,161	0/0:18,0:18:54.13:0,54,577	0/0:21,0:21:54.13:0,54,580	0/0:27,0:27:72.07:0,72,752	0/0:17,0:17:48.10:0,48,502	1/1:15,2:15:25:197,25,0	1/1:26,3:29:61.94:327,62,0	1/1:4,0:4:8.50:67,9,0	0/0:13,0:13:30.07:0,30,320	0/0:25,0:25:69.17:0,69,739	0/0:22,0:21:48.11:0,48,506	1/1:10,1:11:18.46:106,18,0	0/0:23,0:23:66.10:0,66,682	1/1:15,0:14:37.35:230,37,0	0/0:8,0:8:24.05:0,24,250
chr10	104741174	.	TTTTTG	T	5321.34	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=12.161;DP=462;FS=3.731;HRun=0;HaplotypeScore=127.1880;InbreedingCoeff=0.8331;MQ=55.18;MQ0=5;MQRankSum=-11.432;QD=30.23;ReadPosRankSum=-1.837;VQSLOD=4.5037;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:67.47:0,67,1880	1/1:2,2:4:9.03:158,9,0	0/1:26,0:14:7.30:7,0,298	0/1:20,0:9:31.93:32,0,280	0/0:16,0:15:39.13:0,39,1100	1/1:6,8:14:30.09:554,30,0	1/1:4,4:8:17.89:304,18,0	1/1:12,13:24:68.75:1022,69,0	0/0:12,0:12:36.10:0,36,925	0/0:18,0:17:40.78:0,41,887	0/0:11,0:11:30.10:0,30,801	0/0:12,0:12:33.11:0,33,905	0/0:9,0:9:24.08:0,24,666	0/0:5,0:5:15.05:0,15,339	0/0:18,0:18:54.19:0,54,1577	0/0:21,0:21:59.23:0,59,1513	0/0:27,0:27:75.25:0,75,2083	0/0:17,0:17:48.16:0,48,1237	1/1:8,10:16:30.09:528,30,0	1/1:8,21:30:78.02:1412,78,0	1/1:0,4:4:9.03:175,9,0	0/0:13,0:13:30.10:0,30,737	0/0:26,0:26:72.22:0,72,2002	0/0:23,0:22:51.17:0,51,1261	1/1:5,7:12:23.56:375,24,0	0/0:25,0:25:69.23:0,69,1772	1/1:3,12:14:41.90:755,42,0	0/0:8,0:8:24.08:0,24,657
chr10	104741185	.	GT	G	1322.54	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=12.573;DP=467;FS=0.964;HRun=13;HaplotypeScore=107.4434;InbreedingCoeff=0.8846;MQ=55.49;MQ0=5;MQRankSum=-10.549;QD=9.25;ReadPosRankSum=-1.176;VQSLOD=2.6710;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:29:48.05:0,48,603	1/1:1,2:3:8.95:65,9,0	0/0:27,0:12:13.97:0,14,89	0/1:24,0:12:2.42:2,0,72	0/0:17,0:18:39.13:0,39,327	1/1:3,7:10:20.87:151,21,0	1/1:4,2:6:3.87:40,4,0	1/1:17,9:25:33.25:212,33,0	0/0:12,0:12:30.02:0,30,277	0/0:16,0:15:18.90:0,19,304	0/0:9,0:11:26.70:0,27,223	0/0:14,0:16:47.48:0,47,406	0/0:7,0:7:18.46:0,18,160	0/0:7,0:7:11.97:0,12,107	0/0:20,0:20:55.57:0,56,509	0/0:20,0:21:35.40:0,35,380	0/0:25,2:28:31.14:0,31,607	0/0:15,0:15:42:0,42,392	1/1:6,8:12:24.40:150,24,0	1/1:3,23:26:65.44:462,65,0	1/1:0,5:5:5.94:43,6,0	0/0:10,0:10:21.02:0,21,198	0/0:24,1:25:35.65:0,36,500	0/0:19,1:26:29.09:0,29,430	1/1:3,8:11:22.13:145,22,0	0/0:24,2:26:41.65:0,42,555	1/1:4,13:16:33.50:255,34,0	0/0:8,0:8:18.03:0,18,174
chr10	104741213	.	C	CTT	5472.07	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=8.998;DP=496;FS=3.240;HRun=4;HaplotypeScore=100.5828;InbreedingCoeff=0.9942;MQ=67.40;MQ0=0;MQRankSum=-11.477;QD=38.27;ReadPosRankSum=-0.404;VQSLOD=4.0251;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:71.57:0,72,964	1/1:0,9:9:24.08:427,24,0	0/0:27,0:20:50.62:0,51,595	0/0:20,0:12:18.14:0,18,165	0/0:15,0:15:39.12:0,39,498	1/1:3,6:9:18.06:304,18,0	1/1:5,10:15:30.10:537,30,0	1/1:8,24:32:66.19:1063,66,0	0/0:11,0:11:19.53:0,20,313	0/0:19,0:19:50.75:0,51,623	0/0:11,0:11:33.11:0,33,434	0/0:17,0:17:51.16:0,51,651	0/0:12,0:12:29.93:0,30,313	0/0:9,0:9:24.06:0,24,298	0/0:23,0:23:66.12:0,66,804	0/0:26,0:26:75.22:0,75,966	0/0:27,0:27:69.14:0,69,890	0/0:13,0:13:33.10:0,33,422	1/1:3,7:10:30.09:504,30,0	1/1:5,23:28:66.17:1117,66,0	1/1:0,9:9:18.02:286,18,0	0/0:11,0:11:33.10:0,33,420	0/0:23,0:23:68.34:0,68,840	0/0:28,0:27:78.17:0,78,970	1/1:2,13:15:30.10:538,30,0	0/0:18,0:18:54.17:0,54,700	1/1:2,14:16:38.91:697,39,0	0/0:14,0:14:33.11:0,33,439
chr10	104741349	.	GT	G	3830.90	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.947;DP=560;FS=0.779;HRun=6;HaplotypeScore=77.7126;InbreedingCoeff=0.9912;MQ=74.03;MQ0=0;MQRankSum=-8.649;QD=26.79;ReadPosRankSum=-3.910;VQSLOD=2.2994;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,1443	1/1:0,5:5:12.03:129,12,0	0/0:15,0:15:32.92:0,33,328	0/0:28,0:25:49.99:0,50,649	0/0:24,0:24:66.19:0,66,832	1/1:2,7:9:15.03:160,15,0	1/1:6,12:18:51.04:517,51,0	1/1:6,21:27:72.16:759,72,0	0/0:22,0:22:63.18:0,63,801	0/0:23,0:23:69.22:0,69,895	0/0:20,0:20:57.17:0,57,722	0/0:23,0:23:69.22:0,69,907	0/0:16,0:16:45.14:0,45,579	0/0:17,0:17:51.17:0,51,669	0/0:27,0:27:78.24:0,78,1010	0/0:31,0:31:93.30:0,93,1216	0/0:30,0:30:84.23:0,84,1071	0/0:15,0:15:39.11:0,39,497	1/1:6,7:12:33.06:340,33,0	1/1:0,15:15:45.11:480,45,0	1/1:7,12:19:39:388,39,0	0/0:8,0:8:21.07:0,21,275	0/0:15,0:15:39.13:0,39,513	0/0:30,0:30:90.29:0,90,1181	1/1:4,7:10:30.05:306,30,0	0/0:25,0:25:69.22:0,69,894	1/1:7,19:26:72.14:752,72,0	0/0:8,0:8:21.07:0,21,276
chr10	104741375	.	TTG	T	5398.17	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.109;DP=632;FS=3.634;HRun=0;HaplotypeScore=90.3662;InbreedingCoeff=0.9879;MQ=69.22;MQ0=0;MQRankSum=-6.198;QD=32.92;ReadPosRankSum=-4.211;VQSLOD=5.2877;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1993	1/1:1,4:5:9.03:122,9,0	0/0:23,0:23:52.55:0,53,1001	0/0:29,0:29:67.47:0,67,1069	0/0:23,0:23:60.19:0,60,1022	1/1:0,13:13:30.10:405,30,0	1/1:2,17:19:51.16:673,51,0	1/1:6,29:35:87.25:1141,87,0	0/0:22,0:22:63.20:0,63,1068	0/0:27,0:27:81.26:0,81,1382	0/0:20,0:20:60.19:0,60,1023	0/0:21,0:21:60.14:0,60,1015	0/0:21,0:21:63.20:0,63,1069	0/0:21,0:21:63.22:0,63,1103	0/0:29,0:29:87.30:0,87,1517	0/0:35,0:35:99:0,99,1629	0/0:39,0:39:99:0,111,1879	0/0:19,0:19:54.12:0,54,900	1/1:1,16:17:48.16:648,48,0	1/1:1,20:21:63.13:809,63,0	1/1:0,15:15:30.10:405,30,0	0/0:12,0:12:33.11:0,33,578	0/0:18,0:18:54.10:0,54,910	0/0:36,0:36:99:0,108,1809	1/1:0,12:10:24.08:324,24,0	0/0:27,0:27:72.25:0,72,1260	1/1:2,25:27:66.18:871,66,0	0/0:6,0:6:15.05:0,15,263
chr10	104741857	.	T	TCTTAG	8734.58	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=6.917;DP=664;FS=1.697;HRun=0;HaplotypeScore=123.9778;InbreedingCoeff=0.9970;MQ=80.30;MQ0=0;MQRankSum=-14.644;QD=47.21;ReadPosRankSum=-5.551;VQSLOD=3.7713;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,2323	1/1:1,8:10:15.05:441,15,0	0/0:23,0:23:48.15:0,48,932	0/0:21,0:21:63.06:0,63,1129	0/0:32,0:32:84.24:0,84,1649	1/1:2,20:24:45.15:1364,45,0	1/1:5,20:26:51.10:1315,51,0	1/1:2,16:20:54.16:1461,54,0	0/0:21,0:21:57.20:0,57,1144	0/0:29,0:29:75.26:0,75,1525	0/0:18,0:18:51.13:0,51,974	0/0:28,0:28:81.23:0,81,1601	0/0:20,0:20:57.14:0,57,1087	0/0:24,0:24:66.23:0,66,1342	0/0:34,0:34:90.30:0,90,1782	0/0:44,0:43:99:0,117,2245	0/0:25,0:25:69.24:0,69,1399	0/0:26,0:26:75.21:0,75,1463	1/1:3,15:18:45.05:1038,45,0	1/1:0,20:21:47.73:610,48,0	1/1:6,14:20:26.87:373,27,0	0/0:15,0:15:42.14:0,42,861	0/0:16,0:16:48.12:0,48,943	0/0:26,0:26:72.20:0,72,1361	1/1:3,17:20:39.08:942,39,0	0/0:29,0:29:78.27:0,78,1583	1/1:5,21:25:44.94:1189,45,0	0/0:8,0:8:24.08:0,24,489
chr10	104742784	.	GA	G	1105.25	PASS	AB=0.935;AC=19;AF=0.339;AN=56;BaseQRankSum=5.542;DP=418;FS=2.525;HRun=9;HaplotypeScore=55.6555;InbreedingCoeff=0.6989;MQ=61.63;MQ0=8;MQRankSum=-0.973;QD=8.13;ReadPosRankSum=-1.039;VQSLOD=1.2580;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:62.52:0,63,679	0/1:13,0:12:1.49:113,0,1	0/0:10,0:7:9:0,9,84	0/0:15,0:7:8.65:0,9,75	0/0:24,0:24:36.06:0,36,397	1/1:1,10:11:15.01:137,15,0	1/1:2,14:16:24.01:219,24,0	1/1:16,5:18:13.24:253,13,0	0/0:14,0:14:27.07:0,27,299	0/0:14,0:14:30.08:0,30,340	0/1:12,1:13:3.41:3,0,209	0/1:6,1:7:15.43:15,0,91	0/0:8,0:8:18.65:0,19,174	0/0:8,0:9:11.63:0,12,125	0/0:11,0:11:24.07:0,24,277	0/0:26,0:26:51.15:0,51,586	0/0:28,1:28:42.16:0,42,717	0/0:21,0:21:56.96:0,57,612	1/1:8,0:7:2.88:43,3,0	1/1:14,1:15:4.57:147,5,0	1/1:7,0:7:10.92:72,11,0	0/0:9,0:9:12.03:0,12,131	0/0:16,0:15:30.07:0,30,331	0/0:10,0:10:30.07:0,30,332	1/1:5,7:11:17.12:144,17,0	0/0:21,0:21:32.72:0,33,581	1/1:13,0:13:20.43:150,20,0	0/0:14,2:16:2.11:0,2,248
chr10	104742794	.	G	GA	1034.30	PASS	AB=0.966;AC=14;AF=0.250;AN=56;BaseQRankSum=2.559;DP=467;FS=0.518;HRun=12;HaplotypeScore=64.1881;InbreedingCoeff=0.5523;MQ=67.18;MQ0=10;MQRankSum=-0.194;QD=6.63;ReadPosRankSum=-3.150;VQSLOD=1.3952;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:25:33.33:0,33,404	1/1:13,0:12:20:175,20,0	0/1:22,1:12:39.07:39,0,71	0/0:26,0:16:3.85:0,4,72	0/0:18,1:20:11.59:0,12,239	0/0:15,0:15:26.81:0,27,194	0/0:18,0:18:25.83:0,26,179	1/1:27,0:25:49.57:382,50,0	0/0:12,2:14:3.39:0,3,179	0/0:15,0:15:37.29:0,37,251	0/0:12,0:12:23.78:0,24,170	0/0:9,0:9:14.88:0,15,108	0/0:7,0:8:16.45:0,16,102	0/1:8,0:8:15.48:15,0,57	0/0:14,0:14:26.60:0,27,187	0/0:28,0:28:31.20:0,31,328	0/1:31,2:32:14.72:15,0,381	0/0:24,0:22:45.82:0,46,324	0/1:12,0:12:3.86:121,0,4	1/1:15,0:15:25.94:158,26,0	1/1:6,0:6:6.63:47,7,0	0/0:6,0:6:2.95:0,3,22	0/0:11,0:10:14.87:0,15,109	0/0:11,0:11:28.84:0,29,201	0/0:13,0:12:23.67:0,24,161	0/0:22,0:22:44.70:0,45,328	1/1:18,0:18:33.96:261,34,0	0/0:18,0:18:32.57:0,33,217
chr10	104743119	.	T	TAA	1619.73	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.852;DP=335;FS=5.716;HRun=10;HaplotypeScore=52.8696;InbreedingCoeff=0.8965;MQ=74.83;MQ0=1;MQRankSum=-6.829;QD=29.45;ReadPosRankSum=-2.938;VQSLOD=2.9198;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:51.05:0,51,508	1/1:0,6:6:18.06:268,18,0	0/0:18,0:11:20.96:0,21,193	0/0:17,0:12:5.99:0,6,57	0/0:16,0:17:50.85:0,51,499	0/0:11,0:11:21.05:0,21,214	0/0:5,0:5:12.02:0,12,122	1/1:10,7:17:33.11:481,33,0	0/0:5,0:5:8.96:0,9,83	0/0:4,0:4:9:0,9,92	0/0:10,0:12:27.26:0,27,256	0/0:8,0:8:24.05:0,24,244	0/0:4,0:4:12.03:0,12,122	0/0:6,0:6:18.04:0,18,183	0/0:10,0:11:23.79:0,24,225	0/0:16,0:16:38.92:0,39,397	0/0:26,0:27:53.82:0,54,595	0/0:20,0:20:41.87:0,42,417	1/1:4,5:9:18.06:268,18,0	1/1:2,5:7:21:265,21,0	1/1:2,0:2:5.95:62,6,0	0/0:3,0:3:9.02:0,9,92	0/0:10,0:10:20.99:0,21,214	0/0:4,0:4:12.03:0,12,122	0/0:14,0:14:39.09:0,39,397	0/0:21,0:21:54.08:0,54,538	1/1:4,10:14:31.81:456,32,0	0/0:18,0:18:51.09:0,51,511
chr10	104743134	.	G	GA	2828.33	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-2.842;DP=377;FS=3.214;HRun=6;HaplotypeScore=47.6658;InbreedingCoeff=0.9550;MQ=76.43;MQ0=1;MQRankSum=-3.243;QD=27.46;ReadPosRankSum=-1.406;VQSLOD=3.4489;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:63.14:0,63,643	1/1:1,6:7:21.05:249,21,0	0/0:22,0:15:22.81:0,23,198	0/0:19,0:11:8.15:0,8,124	0/0:19,0:19:57.11:0,57,574	1/1:1,9:10:18.06:226,18,0	1/1:0,5:5:15.05:188,15,0	1/1:8,18:26:57.16:692,57,0	0/0:6,0:6:15.03:0,15,153	0/0:5,0:5:15.03:0,15,153	0/0:12,0:12:36.08:0,36,367	0/0:8,0:8:21.05:0,21,214	0/0:6,0:6:15.03:0,15,153	0/0:9,0:9:21.04:0,21,214	0/0:11,0:11:27.06:0,27,275	0/0:16,0:16:38.95:0,39,386	0/0:24,0:24:57.09:0,57,572	0/0:18,0:18:42.01:0,42,428	1/1:2,10:12:30.10:377,30,0	1/1:4,9:13:33.09:401,33,0	1/1:2,2:4:6.02:75,6,0	0/0:6,0:6:18.04:0,18,183	0/0:15,0:15:39.07:0,39,391	0/0:5,0:5:15.02:0,15,146	1/1:1,13:14:39.12:491,39,0	0/0:20,0:20:54.11:0,54,545	1/1:2,10:12:27.09:339,27,0	0/0:26,0:26:78.11:0,78,782
chr10	104745545	.	TGTGTGTGTGTGTGA	T	1719.65	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=1.316;DP=583;FS=9.674;HRun=0;HaplotypeScore=214.9162;InbreedingCoeff=0.9467;MQ=62.55;MQ0=13;MQRankSum=-2.436;QD=15.92;ReadPosRankSum=-2.619;VQSLOD=0.9770;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:28:44.99:0,45,1190	1/1:15,0:15:29.96:659,30,0	0/0:26,0:16:23.70:0,24,181	0/0:33,0:24:16.67:0,17,404	0/0:11,0:11:24.03:0,24,536	0/0:14,0:14:18.01:0,18,647	0/0:27,0:27:69.78:0,70,2207	1/1:27,0:27:53.91:466,54,0	0/0:18,0:18:50.16:0,50,1503	0/0:15,0:15:10.09:0,10,1232	0/0:18,0:17:28:0,28,1053	0/0:22,0:22:47.13:0,47,1508	0/0:16,0:15:32.84:0,33,1226	0/0:18,0:18:36.10:0,36,1411	0/0:23,0:22:35.56:0,36,1404	0/0:29,0:29:63.10:0,63,2661	0/0:22,0:19:32.81:0,33,1639	0/0:29,0:28:57.02:0,57,2260	1/1:3,12:14:31.79:322,32,0	1/1:7,5:11:2.97:20,3,0	1/1:25,1:26:32.84:255,33,0	0/0:14,0:14:32.70:0,33,724	0/0:12,0:12:24.05:0,24,1024	0/0:41,0:40:55.34:0,55,2521	0/0:20,0:20:41.85:0,42,1884	0/0:24,0:23:51.06:0,51,1236	1/1:13,0:13:23.78:179,24,0	0/0:12,0:11:18.05:0,18,822
chr10	104745757	.	TTTTTG	T	3115.54	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=10.361;DP=519;FS=0.410;HRun=0;HaplotypeScore=106.6536;InbreedingCoeff=0.9706;MQ=61.52;MQ0=5;MQRankSum=-1.383;QD=20.77;ReadPosRankSum=-1.279;VQSLOD=3.1099;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,103,2644	1/1:4,1:5:12.04:178,12,0	0/0:29,0:13:19.77:0,20,286	0/0:19,0:10:11.86:0,12,85	0/0:9,0:8:21.02:0,21,392	1/1:22,0:22:25.15:83,25,0	1/1:17,0:17:21.67:74,22,0	1/1:7,27:34:83.67:1133,84,0	0/0:13,0:13:34.30:0,34,753	0/0:19,0:19:23.63:0,24,1075	0/0:9,0:9:23.08:0,23,473	0/0:15,0:15:39.02:0,39,638	0/0:19,0:19:53.35:0,53,1083	0/0:11,0:11:26.98:0,27,556	0/0:23,0:23:66.15:0,66,1592	0/0:23,0:23:69.15:0,69,1606	0/0:21,0:21:59.15:0,59,1346	0/0:24,0:24:72.14:0,72,1499	1/1:13,7:20:24.97:601,25,0	1/1:1,10:11:26.97:325,27,0	1/1:7,5:12:27.94:470,28,0	0/0:11,0:11:32.94:0,33,653	0/0:18,0:18:6.55:0,7,677	0/0:32,0:32:93.20:0,93,2127	1/1:15,0:15:23.01:86,23,0	0/0:29,0:29:81.08:0,81,1825	1/1:14,0:14:32.93:379,33,0	0/0:7,0:7:20.94:0,21,223
chr10	104745760	.	TTG	T	3049	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.481;DP=518;FS=4.982;HRun=0;HaplotypeScore=78.6040;InbreedingCoeff=0.9709;MQ=62.28;MQ0=5;MQRankSum=-4.139;QD=20.88;ReadPosRankSum=0.508;VQSLOD=3.8202;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:85.90:0,86,1468	1/1:5,0:5:4.04:81,4,0	0/0:30,0:12:25.04:0,25,222	0/0:20,0:11:16.34:0,16,167	0/0:9,0:8:21.01:0,21,246	1/1:0,22:22:51.17:751,51,0	1/1:0,17:17:36.12:521,36,0	1/1:33,0:33:56.40:512,56,0	0/0:14,0:14:37.32:0,37,492	0/0:19,0:19:53.61:0,54,711	0/0:8,0:8:23.27:0,23,298	0/0:16,0:16:44.93:0,45,506	0/0:19,0:19:56.01:0,56,646	0/0:10,0:10:26.89:0,27,346	0/0:24,0:24:69.11:0,69,970	0/0:23,0:23:68.89:0,69,953	0/0:22,0:22:62.90:0,63,875	0/0:24,0:24:71.43:0,71,944	1/1:19,0:19:32.10:315,32,0	1/1:11,0:11:17.44:141,17,0	1/1:12,0:12:28.16:226,28,0	0/0:11,0:11:32.66:0,33,391	0/0:17,0:17:36.12:0,36,477	0/0:34,0:34:95.63:0,96,1237	1/1:2,11:13:33.11:488,33,0	0/0:27,0:27:67.87:0,68,1056	1/1:14,0:14:32.93:225,33,0	0/0:7,0:7:21.02:0,21,237
chr10	104745761	.	TG	T	2125.94	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.992;DP=524;FS=9.049;HRun=1;HaplotypeScore=74.6884;InbreedingCoeff=0.9658;MQ=65.76;MQ0=5;MQRankSum=-4.914;QD=14.76;ReadPosRankSum=0.654;VQSLOD=2.5046;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:71.04:0,71,1084	1/1:5,0:5:3.77:58,4,0	0/0:29,4:15:22.48:0,22,176	0/0:23,0:13:17.40:0,17,154	0/0:9,0:8:20.98:0,21,198	1/1:22,0:22:51.01:447,51,0	1/1:17,0:17:35.95:306,36,0	1/1:32,1:33:51.19:473,51,0	0/0:15,0:15:40.31:0,40,420	0/0:18,0:18:53.93:0,54,562	0/0:8,0:8:15.71:0,16,216	0/0:16,0:16:44.91:0,45,428	0/0:19,0:19:51.41:0,51,503	0/0:9,0:9:26.90:0,27,271	0/0:25,0:25:68.90:0,69,756	0/0:23,0:23:65.99:0,66,723	0/0:22,0:22:59.93:0,60,667	0/0:24,0:24:57.96:0,58,714	1/1:19,0:19:31.87:254,32,0	1/1:11,0:11:13.34:114,13,0	1/1:11,0:11:27.81:184,28,0	0/0:11,0:11:29.90:0,30,303	0/0:15,0:15:32.12:0,32,366	0/0:34,0:34:92.18:0,92,965	1/1:12,0:12:33.01:291,33,0	0/0:30,1:31:46.17:0,46,831	1/1:13,1:14:29.07:208,29,0	0/0:7,0:7:20.92:0,21,172
chr10	104745762	.	G	GT	654.68	PASS	AB=0.892;AC=10;AF=0.179;AN=56;BaseQRankSum=5.574;DP=524;FS=0.000;HRun=11;HaplotypeScore=80.1396;InbreedingCoeff=0.6708;MQ=65.66;MQ0=6;MQRankSum=0.121;QD=6.30;ReadPosRankSum=-5.633;VQSLOD=0.7372;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:87.49:0,87,675	0/0:4,0:5:10.92:0,11,51	0/0:33,0:15:3.61:0,4,86	0/0:23,0:13:8.24:0,8,55	0/0:9,0:8:8.95:0,9,70	0/0:22,0:22:19.23:0,19,63	0/0:17,0:17:17.79:0,18,50	1/1:35,0:34:37.15:381,37,0	0/0:14,0:14:32.86:0,33,253	0/0:17,1:18:17.37:0,17,318	0/0:7,0:8:19.96:0,20,145	0/0:16,0:16:26.86:0,27,206	0/0:17,1:19:6.59:0,7,226	0/0:9,0:9:17.91:0,18,137	0/0:24,1:25:29.33:0,29,410	0/0:20,1:22:28.36:0,28,393	0/0:22,0:22:55.82:0,56,424	0/0:22,0:24:60.84:0,61,453	1/1:16,1:18:7.80:71,8,0	1/1:11,0:11:5.31:128,5,0	0/1:9,2:11:8.05:25,0,8	0/0:10,0:11:22.95:0,23,168	0/1:13,1:15:1.53:2,0,162	0/0:30,2:33:21.82:0,22,516	0/0:12,0:12:17.12:0,17,50	0/0:31,0:31:49.18:0,49,523	1/1:11,3:14:23.59:200,24,0	0/0:7,0:7:14.94:0,15,116
chr10	104745937	.	C	CTT	3805.73	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.267;DP=538;FS=5.830;HRun=9;HaplotypeScore=63.8621;InbreedingCoeff=0.9882;MQ=65.62;MQ0=1;MQRankSum=-0.221;QD=34.29;ReadPosRankSum=-3.174;VQSLOD=2.9728;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:55:99:0,147,1556	0/0:8,0:8:18.04:0,18,191	0/0:10,0:10:20.71:0,21,200	0/0:18,0:16:25.31:0,25,307	0/0:8,0:8:12:0,12,127	0/0:17,0:17:33.04:0,33,343	0/0:18,0:18:51.09:0,51,526	1/1:6,30:39:96.04:1342,96,0	0/0:17,0:16:39.09:0,39,415	0/0:14,0:14:36.09:0,36,383	0/0:15,0:15:42.07:0,42,439	0/0:18,0:18:33.05:0,33,351	0/0:17,0:17:45.10:0,45,479	0/0:14,0:14:36.07:0,36,383	0/0:22,0:22:63.16:0,63,671	0/0:21,0:21:60.15:0,60,638	0/0:36,0:36:96.21:0,96,1011	0/0:19,0:19:39.06:0,39,404	1/1:5,18:23:54.14:801,54,0	1/1:1,8:11:21.07:323,21,0	1/1:2,19:21:48.16:739,48,0	0/0:14,0:14:33.03:0,33,331	0/0:12,0:12:33.06:0,33,343	0/0:19,0:19:47.77:0,48,489	0/0:14,0:14:33.06:0,33,349	0/0:25,0:25:72.17:0,72,760	1/1:0,17:17:38.96:600,39,0	0/0:16,0:16:48.12:0,48,511
chr10	104746238	.	CATTTGTTTATTTATTT	C	671.77	PASS	AB=1.000;AC=9;AF=0.180;AN=50;BaseQRankSum=3.088;DP=152;FS=4.736;HRun=0;HaplotypeScore=75.5803;InbreedingCoeff=0.4702;MQ=72.08;MQ0=1;MQRankSum=-3.151;QD=24.88;ReadPosRankSum=-1.508;VQSLOD=1.6257;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:29.91:0,30,1192	0/0:3,0:3:5.99:0,6,48	0/0:7,0:6:6.04:0,6,68	0/0:8,0:8:11.91:0,12,98	./.	0/0:4,0:4:12.02:0,12,429	./.	0/1:13,0:13:18.98:192,0,19	0/0:3,0:3:6.01:0,6,261	0/0:5,0:5:15.02:0,15,345	0/0:1,0:1:3:0,3,26	0/0:6,0:6:14.95:0,15,507	0/0:5,0:5:12.02:0,12,725	0/0:1,0:1:3.01:0,3,236	./.	0/0:2,0:2:5.99:0,6,50	0/0:25,0:25:75.03:0,75,3709	0/0:17,0:17:51.07:0,51,2421	1/1:1,7:7:21.03:520,21,0	1/1:1,0:1:3:25,3,0	1/1:1,0:1:2.99:24,3,0	0/0:1,0:1:2.99:0,3,24	0/0:5,0:5:15:0,15,539	0/0:4,0:4:5.91:0,6,251	0/0:4,0:4:12.02:0,12,327	0/0:6,0:6:18.01:0,18,366	1/1:0,0:4:3.01:41,3,0	0/0:8,0:8:24.02:0,24,792
chr10	104746243	.	GTTTA	G	225.74	PASS	AC=8;AF=0.235;AN=34;BaseQRankSum=4.572;DP=144;FS=0.000;HRun=0;HaplotypeScore=33.9210;InbreedingCoeff=0.5007;MQ=66.34;MQ0=1;MQRankSum=-1.625;QD=10.75;ReadPosRankSum=-0.255;VQSLOD=2.0327;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:12.04:0,12,278	./.	./.	./.	./.	1/1:1,4:5:9.03:138,9,0	./.	./.	0/0:2,0:2:3.01:0,3,70	0/0:4,0:4:3.01:0,3,70	./.	0/0:5,0:5:6.01:0,6,95	0/0:4,0:4:9.03:0,9,192	0/0:1,0:1:3.01:0,3,70	0/0:1,0:1:3.01:0,3,50	./.	0/0:26,0:26:48.16:0,48,1017	0/0:17,0:17:30.10:0,30,662	1/1:8,0:7:9.01:83,9,0	./.	./.	./.	0/0:5,0:5:6.02:0,6,120	0/0:3,0:3:3.01:0,3,70	1/1:2,2:4:6.02:92,6,0	0/0:6,0:6:3.01:0,3,70	1/1:4,0:4:3:28,3,0	0/0:9,0:9:6.02:0,6,140
chr10	104746519	.	T	TCACC	485.92	PASS	AB=1.000;AC=17;AF=0.472;AN=36;BaseQRankSum=-1.262;DP=74;FS=9.204;HRun=0;HaplotypeScore=21.6134;InbreedingCoeff=0.3514;MQ=96.19;MQ0=0;MQRankSum=-0.376;QD=17.35;ReadPosRankSum=-1.041;VQSLOD=1.2712;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:6.02:0,6,101	1/1:1,0:1:0.47:1,0,0	0/1:6,0:6:5.89:6,0,85	0/0:12,0:10:1.73:0,2,65	0/0:1,0:1:3.01:0,3,50	1/1:1,1:2:3.01:74,3,0	1/1:2,0:2:0.47:1,0,0	1/1:1,1:2:3.01:74,3,0	./.	0/0:1,0:1:3.01:0,3,50	./.	0/0:2,0:2:3.01:0,3,50	0/0:4,0:4:6.02:0,6,101	./.	./.	./.	0/0:4,0:4:5.58:0,6,100	./.	1/1:6,0:6:3.01:74,3,0	./.	1/1:1,2:3:6.02:149,6,0	./.	./.	./.	1/1:2,1:3:6.02:147,6,0	0/0:4,0:4:6.02:0,6,101	1/1:2,1:3:3.01:74,3,0	0/0:1,0:1:3.01:0,3,45
chr10	104747274	.	TCCCC	T	2364.73	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.349;DP=408;FS=29.796;HRun=13;HaplotypeScore=89.0760;InbreedingCoeff=0.8523;MQ=79.69;MQ0=1;MQRankSum=-10.080;QD=27.82;ReadPosRankSum=8.697;VQSLOD=-0.3462;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:23:32.58:0,33,463	0/0:2,0:2:2.51:0,3,18	0/0:29,0:23:47.06:0,47,665	0/0:17,0:14:28.48:0,28,319	0/0:14,0:15:18.53:0,19,377	0/0:9,0:9:21.07:0,21,395	0/0:21,0:21:34.88:0,35,595	1/1:3,10:13:23.28:350,23,0	0/0:9,0:10:21.07:0,21,422	0/0:9,0:10:15.03:0,15,237	0/0:4,0:4:6.02:0,6,83	0/0:16,0:16:15.01:0,15,229	0/0:11,0:12:24.06:0,24,465	0/0:22,0:22:45.10:0,45,786	0/0:10,0:14:24.08:0,24,440	0/0:9,0:9:6.02:0,6,88	0/0:19,0:19:41.95:0,42,659	0/0:10,0:10:24.97:0,25,471	1/1:9,5:14:13.93:218,14,0	1/1:4,17:21:51.09:745,51,0	1/1:5,9:14:23.74:350,24,0	0/0:8,0:9:15.04:0,15,222	0/0:7,0:8:2.65:0,3,37	0/0:21,0:25:46.71:0,47,811	0/0:9,0:9:21.06:0,21,360	0/0:21,0:21:36.06:0,36,594	1/1:3,20:23:60.07:872,60,0	0/0:6,0:9:15.05:0,15,210
chr10	104747766	.	GGT	G	320.99	PASS	AB=0.962;AC=20;AF=0.455;AN=44;BaseQRankSum=2.867;DP=452;FS=2.754;HRun=0;HaplotypeScore=74.1969;InbreedingCoeff=0.0696;MQ=62.12;MQ0=23;MQRankSum=0.270;QD=1.34;ReadPosRankSum=0.739;VQSLOD=0.8608;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,4:22:24.59:25,0,131	1/1:7,0:6:5.64:27,6,0	./.	./.	0/1:17,0:15:1.22:1,0,123	1/1:16,0:15:5.68:28,6,0	1/1:34,0:33:8.52:42,9,0	./.	0/0:10,0:9:9.01:0,9,107	1/1:13,4:15:5.78:31,6,0	1/1:7,0:8:13.97:83,14,0	0/1:15,0:15:17.50:17,0,117	0/1:10,0:9:8.52:9,0,63	0/1:14,0:14:27.11:73,0,27	0/1:12,3:15:11.30:11,0,19	0/0:15,0:15:20.97:0,21,202	0/1:28,0:28:86.82:87,0,111	0/0:21,0:20:31.38:0,31,279	./.	./.	0/0:39,0:42:0:0,0,0	0/0:13,0:11:2.98:0,3,21	0/0:3,0:3:3:0,3,25	0/0:16,0:16:3.14:0,3,167	1/1:13,0:13:2.84:14,3,0	0/1:20,0:20:12.01:12,0,61	./.	0/0:7,0:5:2.60:0,3,10
chr10	104747788	.	TGTGTGTGTGTGTGTGTGTGTGCGC	T	1641.96	PASS	AB=1.000;AC=8;AF=0.148;AN=54;BaseQRankSum=5.157;DP=382;FS=10.650;HRun=0;HaplotypeScore=178.7778;InbreedingCoeff=0.5545;MQ=50.13;MQ0=26;MQRankSum=-4.685;QD=23.13;ReadPosRankSum=3.272;VQSLOD=1.7512;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:23:45.15:0,45,3757	0/1:12,0:11:35.50:135,0,35	./.	0/0:5,0:1:2.04:0,2,6	0/0:16,0:14:24.07:0,24,1783	1/1:4,6:9:6.02:398,6,0	1/1:11,20:30:21.07:1037,21,0	0/0:14,0:14:36.03:0,36,603	0/0:7,0:6:15.05:0,15,1379	0/0:14,0:13:33.11:0,33,1729	0/0:6,0:6:18.06:0,18,1374	0/0:12,0:11:30.10:0,30,2361	0/0:9,0:7:21.07:0,21,1646	0/0:13,0:13:30.10:0,30,2278	0/0:15,0:15:29.58:0,30,1424	0/0:10,0:10:27.09:0,27,2282	0/0:25,0:25:62.29:0,62,4222	0/0:18,0:17:51.18:0,51,3970	0/1:7,0:6:5.02:5,0,309	0/0:6,0:4:9.01:0,9,130	0/0:46,0:44:47.14:0,47,1214	0/0:11,0:9:15.05:0,15,537	0/0:4,0:3:6:0,6,290	0/0:14,0:14:36.12:0,36,2938	1/1:1,10:10:3.01:199,3,0	0/0:18,0:17:48.12:0,48,2639	0/0:12,0:11:30.04:0,30,584	0/0:6,0:4:9.03:0,9,425
chr10	104747794	.	TGTGTGTGTGTGTGTGCGCGC	T	1366.99	PASS	AB=1.000;AC=10;AF=0.192;AN=52;BaseQRankSum=4.753;DP=344;FS=9.136;HRun=0;HaplotypeScore=139.3420;InbreedingCoeff=0.5022;MQ=50.87;MQ0=23;MQRankSum=-3.810;QD=18.47;ReadPosRankSum=2.055;VQSLOD=1.7838;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:25:51.17:0,51,2916	1/1:3,8:10:2.03:319,2,0	./.	./.	0/0:14,0:12:21.07:0,21,1267	1/1:9,0:8:6.02:268,6,0	1/1:25,0:24:20.30:673,20,0	0/0:11,0:11:5.95:0,6,62	0/0:6,0:6:15.05:0,15,1068	0/0:14,0:13:30.10:0,30,1055	0/0:6,0:6:18.06:0,18,996	0/0:12,0:11:27.09:0,27,1658	0/0:9,0:7:21.07:0,21,1130	0/0:13,0:13:30.10:0,30,1640	0/0:14,0:14:25.44:0,25,826	0/0:9,0:9:27.09:0,27,1688	0/0:23,0:23:58.92:0,59,3268	0/0:17,0:16:48.16:0,48,3047	0/1:6,0:6:55.33:55,0,145	0/0:2,0:1:3.01:0,3,53	0/0:37,0:35:26.18:0,26,654	0/0:9,0:7:9.02:0,9,281	0/0:3,0:2:3.01:0,3,190	0/0:15,0:15:36.12:0,36,2281	1/1:11,0:10:3.01:132,3,0	0/0:17,0:16:42.14:0,42,1701	0/1:12,0:11:59.88:60,0,263	0/0:6,0:4:8.99:0,9,252
chr10	104753654	.	GC	G	5435.56	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.464;DP=643;FS=11.096;HRun=1;HaplotypeScore=66.1350;InbreedingCoeff=0.9997;MQ=90.02;MQ0=0;MQRankSum=-5.312;QD=40.26;ReadPosRankSum=-2.198;VQSLOD=3.7984;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1628	0/0:9,0:9:27.09:0,27,432	0/0:33,0:33:99:0,99,1508	0/0:16,1:17:37.26:0,37,686	0/0:17,0:17:51.17:0,51,815	0/0:21,0:21:63.20:0,63,982	0/0:27,0:27:81.28:0,81,1295	1/1:0,32:32:93.30:1283,93,0	0/0:29,0:29:87.30:0,87,1387	0/0:28,0:28:84.29:0,84,1343	0/0:18,0:18:54.18:0,54,863	0/0:30,0:30:90.29:0,90,1413	0/0:25,0:25:75.24:0,75,1176	0/0:19,0:19:57.19:0,57,911	0/0:21,0:21:60.20:0,60,959	0/0:19,0:19:57.19:0,57,911	0/0:28,0:28:84.29:0,84,1343	0/0:16,0:16:48.16:0,48,767	1/1:0,19:19:57.19:796,57,0	1/1:0,16:16:48.16:671,48,0	1/1:0,47:47:99:1930,138,0	0/0:20,0:20:60.19:0,60,936	0/0:14,0:14:42.13:0,42,646	0/0:21,0:20:63.21:0,63,1007	0/0:18,0:18:51.17:0,51,813	0/0:29,0:29:87.30:0,87,1388	1/1:0,21:21:54.18:755,54,0	0/0:14,0:14:39.13:0,39,620
chr10	104754215	.	C	CT	1056.22	PASS	AB=0.932;AC=11;AF=0.196;AN=56;BaseQRankSum=5.283;DP=670;FS=3.047;HRun=12;HaplotypeScore=99.9335;InbreedingCoeff=0.5963;MQ=69.42;MQ0=1;MQRankSum=-2.108;QD=7.14;ReadPosRankSum=-3.168;VQSLOD=2.1332;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:41:93.31:0,93,659	1/1:8,5:14:8.07:220,8,0	0/0:19,0:16:4.37:0,4,53	0/0:13,0:11:3.25:0,3,73	0/0:21,0:22:40.53:0,41,281	1/1:5,11:17:42.95:373,43,0	1/1:7,8:16:30.36:277,30,0	0/1:30,2:32:33.53:34,0,239	0/0:27,0:30:64.52:0,65,460	0/0:20,0:23:13.69:0,14,240	0/0:21,0:21:38.71:0,39,284	0/0:21,2:23:27.47:0,27,365	0/0:24,0:24:54.51:0,55,396	0/0:25,0:29:68.73:0,69,477	0/0:36,2:39:18.03:0,18,447	0/0:32,0:33:51.93:0,52,505	0/1:16,2:21:1.03:1,0,232	0/0:24,0:26:52.64:0,53,375	0/0:19,1:21:8.57:0,9,214	0/0:29,0:30:61.62:0,62,442	0/0:19,0:19:32.12:0,32,226	0/0:25,1:27:11.61:0,12,239	0/0:18,1:19:12.55:0,13,255	0/1:29,2:32:46.13:46,0,307	1/1:8,8:16:12.86:266,13,0	0/0:25,0:27:57.73:0,58,405	0/0:22,0:22:53.42:0,53,383	0/0:14,0:14:32.76:0,33,239
chr10	104754245	.	GA	G	6402.68	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=10.344;DP=642;FS=13.552;HRun=2;HaplotypeScore=73.4692;InbreedingCoeff=0.9999;MQ=84.66;MQ0=0;MQRankSum=-3.545;QD=35.57;ReadPosRankSum=-1.756;VQSLOD=3.2642;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1671	1/1:0,11:11:33.11:427,33,0	0/0:34,0:33:79.73:0,80,984	0/0:18,0:17:42.06:0,42,537	0/0:16,0:16:48.16:0,48,704	1/1:0,15:15:45.15:582,45,0	1/1:0,14:14:39.13:504,39,0	1/1:1,33:34:93.29:1194,93,0	0/0:28,0:28:78.25:0,78,1144	0/0:20,0:20:57.19:0,57,846	0/0:21,0:21:60.20:0,60,892	0/0:20,0:20:60.19:0,60,868	0/0:24,0:24:72.20:0,72,1016	0/0:23,0:23:69.23:0,69,1025	0/0:34,0:34:99:0,99,1475	0/0:31,0:31:90.30:0,90,1348	0/0:18,0:18:54.18:0,54,808	0/0:28,0:28:84.19:0,84,1182	1/1:0,15:15:45.11:543,45,0	1/1:0,29:29:84.23:1060,84,0	1/1:0,20:20:54.18:700,54,0	0/0:21,0:21:57.19:0,57,837	0/0:24,0:24:72.17:0,72,1019	0/0:20,0:20:51.12:0,51,702	1/1:0,15:15:42.14:543,42,0	0/0:29,0:29:87.28:0,87,1268	1/1:0,27:27:66.21:849,66,0	0/0:13,0:13:39.04:0,39,496
chr10	104754969	.	GC	G	160.31	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=3.735;DP=535;FS=7.353;HRun=4;HaplotypeScore=57.6827;InbreedingCoeff=0.6512;MQ=64.29;MQ0=0;MQRankSum=0.652;QD=13.36;ReadPosRankSum=-1.350;VQSLOD=1.4087;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,1661	1/1:1,7:8:21.06:251,21,0	0/0:2,0:2:3.01:0,3,39	0/1:4,0:4:6.26:6,0,8	0/0:11,0:11:27.07:0,27,343	0/0:17,0:17:51.17:0,51,698	0/0:22,0:22:54.13:0,54,684	0/0:22,0:22:53.87:0,54,635	0/0:19,0:19:51.16:0,51,690	0/0:13,0:13:39.11:0,39,512	0/0:8,0:8:24.06:0,24,297	0/0:26,0:26:75.11:0,75,995	0/0:12,0:12:36.12:0,36,500	0/0:25,0:25:75.24:0,75,1027	0/0:23,0:23:66.15:0,66,874	0/0:16,0:16:45.12:0,45,591	0/0:37,0:37:99:0,105,1422	0/0:27,0:27:78.23:0,78,1051	0/0:14,0:14:30.06:0,30,380	0/0:9,0:9:24.07:0,24,316	0/0:61,0:61:99:0,159,2135	0/0:8,0:8:24.08:0,24,334	0/0:15,0:15:39.13:0,39,538	0/0:31,0:31:90.24:0,90,1211	0/0:15,0:15:45.13:0,45,596	0/0:16,0:16:48.14:0,48,634	0/0:24,0:24:66.19:0,66,876	0/0:8,0:8:24.05:0,24,299
chr10	104755127	.	GCACC	G	1318.21	PASS	AB=0.935;AC=7;AF=0.125;AN=56;BaseQRankSum=10.879;DP=376;FS=73.013;HRun=0;HaplotypeScore=73.2815;InbreedingCoeff=0.1483;MQ=71.54;MQ0=0;MQRankSum=-2.862;QD=10.89;ReadPosRankSum=7.657;VQSLOD=-0.6680;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.02:0,60,762	0/1:10,1:11:19.04:144,0,19	0/0:9,0:9:18.02:0,18,278	0/0:10,0:9:23.90:0,24,216	0/0:8,0:8:18.05:0,18,287	0/0:14,0:15:34.50:0,34,457	0/0:22,0:22:51.47:0,51,624	0/1:20,0:20:99:120,0,200	0/0:11,0:11:27.06:0,27,492	0/0:10,0:10:24.05:0,24,332	0/0:3,0:3:8.99:0,9,74	0/0:10,0:10:22.86:0,23,356	0/0:13,0:13:35.88:0,36,644	0/0:15,0:15:27.97:0,28,400	0/0:14,0:14:36:0,36,589	0/0:5,0:5:15.05:0,15,279	0/0:17,0:18:45.09:0,45,790	0/0:18,0:18:43.51:0,44,936	0/1:18,1:19:99:185,0,158	0/1:10,2:12:29.97:202,0,30	0/1:38,2:40:72.49:474,0,72	0/0:4,0:4:12.01:0,12,179	0/0:6,0:6:15.01:0,15,218	0/0:18,0:18:41.92:0,42,726	0/0:10,0:10:30.04:0,30,418	0/0:8,0:8:15.01:0,15,171	1/1:16,3:19:11.28:328,11,0	0/0:6,0:6:15.01:0,15,306
chr10	104757645	.	A	ATGTGGG	1285.61	PASS	AC=14;AF=0.280;AN=50;BaseQRankSum=1.608;DP=242;FS=0.000;HRun=0;HaplotypeScore=69.2467;InbreedingCoeff=0.6964;MQ=81.99;MQ0=0;MQRankSum=-3.377;QD=18.11;ReadPosRankSum=0.249;VQSLOD=2.7932;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:41.92:0,42,540	./.	0/0:15,0:10:1.75:0,2,264	0/0:20,0:17:31.86:0,32,447	0/0:13,0:13:8.64:0,9,117	1/1:7,0:7:6.02:134,6,0	1/1:11,5:18:9.03:302,9,0	1/1:14,2:16:27.25:582,27,0	0/0:5,0:5:15.02:0,15,225	0/0:10,0:10:27.01:0,27,445	0/0:5,0:5:6.02:0,6,127	0/0:6,0:6:12.02:0,12,191	./.	0/0:4,0:4:2.53:0,3,65	0/0:9,0:9:21.07:0,21,411	0/0:7,0:7:12.04:0,12,245	0/0:17,0:17:38.98:0,39,601	0/0:9,0:9:18.01:0,18,242	1/1:4,1:7:9.01:222,9,0	./.	1/1:8,8:18:2.91:83,3,0	0/0:5,0:5:11.92:0,12,109	0/0:3,0:3:3.01:0,3,36	0/0:9,0:9:18.06:0,18,348	1/1:4,0:4:6.01:75,6,0	0/0:5,0:5:9.03:0,9,141	1/1:1,0:1:3.01:47,3,0	0/0:5,0:5:11.99:0,12,168
chr10	104757757	.	G	GTT	1221.46	PASS	AC=14;AF=0.269;AN=52;BaseQRankSum=5.202;DP=211;FS=3.552;HRun=3;HaplotypeScore=33.9932;InbreedingCoeff=0.7711;MQ=78.63;MQ0=1;MQRankSum=-2.261;QD=31.32;ReadPosRankSum=-2.745;VQSLOD=2.0343;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:64.48:0,64,1063	1/1:1,0:1:3.01:42,3,0	0/0:7,0:6:15.05:0,15,204	0/0:6,0:6:11.98:0,12,131	0/0:8,0:8:21.07:0,21,288	1/1:0,0:5:9.02:110,9,0	./.	1/1:0,18:18:51.17:775,51,0	0/0:6,0:6:15.05:0,15,209	0/0:5,0:5:12.04:0,12,166	0/0:7,0:7:20.98:0,21,264	0/0:6,0:6:15.05:0,15,209	0/0:5,0:5:12.04:0,12,166	0/0:3,0:3:6.02:0,6,83	0/0:4,0:4:12.03:0,12,151	0/0:6,0:6:18.06:0,18,247	0/0:19,0:19:54.16:0,54,729	0/0:28,0:28:84.25:0,84,1144	1/1:5,0:5:15.05:204,15,0	1/1:5,0:5:9.03:124,9,0	./.	0/0:1,0:1:3.01:0,3,41	0/0:7,0:7:15.05:0,15,206	0/0:2,0:2:5.99:0,6,62	1/1:0,0:1:3.01:49,3,0	0/0:4,0:4:9.03:0,9,126	1/1:1,3:4:6.02:85,6,0	0/0:17,0:17:48.10:0,48,609
chr10	104757760	.	TA	T	788.45	PASS	AB=0.896;AC=10;AF=0.192;AN=52;BaseQRankSum=6.950;DP=220;FS=2.604;HRun=1;HaplotypeScore=30.6615;InbreedingCoeff=0.3350;MQ=73.13;MQ0=1;MQRankSum=-1.523;QD=15.46;ReadPosRankSum=-1.954;VQSLOD=2.6753;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.26:0,87,1263	1/1:0,1:1:3.01:42,3,0	0/0:6,0:5:15.05:0,15,204	0/0:6,0:6:11.98:0,12,133	0/0:7,0:7:21.07:0,21,308	0/1:6,0:6:2.76:3,0,28	./.	0/1:27,0:27:84.83:495,0,85	0/0:6,0:6:18.06:0,18,273	0/0:4,0:4:12.04:0,12,176	0/0:7,0:7:20.99:0,21,280	0/0:5,0:5:15.05:0,15,229	0/0:4,0:4:12.04:0,12,182	0/0:2,0:2:6.02:0,6,88	0/0:4,0:4:12.03:0,12,166	0/0:6,0:6:18.06:0,18,256	0/0:19,0:19:54.65:0,55,803	0/0:29,0:29:87.24:0,87,1263	0/1:2,5:7:18.91:183,0,19	1/1:0,5:5:9.03:124,9,0	./.	0/0:1,0:1:3.01:0,3,47	0/0:7,0:7:15.05:0,15,222	0/0:2,0:2:6.02:0,6,87	0/1:2,0:2:11.98:25,0,12	0/0:4,0:4:12.04:0,12,187	1/1:3,0:3:4.57:51,5,0	0/0:17,0:17:51.11:0,51,699
chr10	104758052	.	TACTCCCTA	T	4959.92	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.164;DP=475;FS=6.661;HRun=0;HaplotypeScore=132.4467;InbreedingCoeff=0.9503;MQ=94.24;MQ0=0;MQRankSum=-11.928;QD=49.60;ReadPosRankSum=0.166;VQSLOD=3.8071;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,6128	1/1:0,3:3:9.03:249,9,0	0/0:25,0:25:58.75:0,59,1930	0/0:28,0:28:62.80:0,63,2215	0/0:8,0:8:24.08:0,24,903	1/1:2,10:12:30.10:830,30,0	1/1:2,23:22:54.18:1452,54,0	1/1:6,10:16:27.09:747,27,0	0/0:15,0:15:45.15:0,45,1826	0/0:18,0:18:54.18:0,54,2103	0/0:3,0:3:9.03:0,9,310	0/0:14,0:14:39.13:0,39,1636	0/0:18,0:18:48.16:0,48,2007	0/0:23,0:23:66.21:0,66,2667	0/0:25,0:25:75.26:0,75,3162	0/0:19,0:19:57.20:0,57,2425	0/0:22,0:22:66.23:0,66,2779	0/0:21,0:21:57.20:0,57,2474	1/1:4,3:7:6.02:166,6,0	1/1:2,5:7:20.96:441,21,0	1/1:5,10:15:12.04:332,12,0	0/0:9,0:9:21.07:0,21,887	0/0:7,0:7:21.07:0,21,854	0/0:35,0:35:99:0,102,4242	1/1:1,6:7:12.04:332,12,0	0/0:18,0:18:45.14:0,45,1745	1/1:2,6:8:15.05:410,15,0	0/0:17,0:17:48.16:0,48,1830
chr10	104758134	.	GCA	G	410.20	PASS	AB=0.882;AC=16;AF=0.320;AN=50;BaseQRankSum=4.556;DP=468;FS=2.370;HRun=0;HaplotypeScore=69.6110;InbreedingCoeff=-0.3636;MQ=60.31;MQ0=14;MQRankSum=-0.400;QD=1.40;ReadPosRankSum=1.101;VQSLOD=1.6167;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:49,1:50:47.08:47,0,653	1/1:2,0:2:2.80:13,3,0	./.	./.	0/1:7,3:10:48.72:49,0,162	0/0:17,0:16:8.37:0,8,217	0/1:20,0:18:25.32:25,0,201	./.	0/1:13,4:17:45.69:46,0,184	0/1:12,4:15:68.63:69,0,118	0/0:7,0:7:14.52:0,15,205	0/1:15,2:17:26.54:27,0,226	0/1:9,2:10:18.34:18,0,156	0/1:15,2:17:40.85:41,0,247	0/1:22,1:23:0.29:0,0,398	0/0:15,0:15:15.84:0,16,307	0/1:25,3:27:8.25:8,0,406	0/1:10,2:12:23.07:85,0,23	0/0:6,0:6:2.04:0,2,6	0/0:5,0:6:2.04:0,2,6	0/0:4,0:4:3.01:0,3,33	0/1:15,1:17:29.41:29,0,161	0/0:13,0:13:17.96:0,18,252	0/1:38,3:41:48.94:49,0,662	0/0:4,0:4:9.03:0,9,133	0/0:15,0:15:12.93:0,13,180	0/0:5,0:5:2.97:0,3,20	0/1:7,2:10:42.75:43,0,204
chr10	104758175	.	TA	T	903.67	PASS	AB=0.885;AC=9;AF=0.161;AN=56;BaseQRankSum=4.219;DP=479;FS=0.000;HRun=10;HaplotypeScore=61.2526;InbreedingCoeff=0.5781;MQ=64.00;MQ0=12;MQRankSum=0.175;QD=7.35;ReadPosRankSum=-0.502;VQSLOD=1.3636;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,1:37:79.16:0,79,1062	0/0:1,0:1:0:0,0,0	0/0:23,0:10:18.17:0,18,144	0/0:21,0:12:28.61:0,29,291	0/0:16,0:16:39.11:0,39,431	1/1:5,11:15:32.83:269,33,0	1/1:13,16:26:62.48:524,62,0	0/0:11,0:11:24.06:0,24,265	0/0:20,0:20:56.95:0,57,585	0/0:22,0:19:42.10:0,42,450	0/1:7,1:8:1.98:2,0,194	0/0:18,0:18:50.71:0,51,509	0/0:14,0:14:39.09:0,39,416	0/0:16,1:17:15.65:0,16,372	0/0:22,0:22:63.09:0,63,653	0/0:14,1:16:9.85:0,10,303	0/0:28,0:27:59.68:0,60,687	0/0:11,1:12:4.01:0,4,261	0/0:13,0:11:18.03:0,18,183	0/0:6,0:6:13.96:0,14,108	0/0:7,0:5:6.02:0,6,66	0/0:15,0:15:36.06:0,36,379	0/0:13,0:12:27.94:0,28,286	0/1:36,4:40:14.20:14,0,773	1/1:2,10:12:26.99:234,27,0	0/1:15,3:18:10.08:10,0,317	0/0:10,0:10:20.99:0,21,217	0/0:12,0:12:30.02:0,30,308
chr10	104758398	.	CA	C	6421.46	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.171;DP=606;FS=0.702;HRun=1;HaplotypeScore=79.9041;InbreedingCoeff=0.9980;MQ=93.08;MQ0=1;MQRankSum=-5.208;QD=35.87;ReadPosRankSum=0.737;VQSLOD=4.9712;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,178,2725	1/1:0,7:7:18.06:251,18,0	0/0:28,0:28:78.24:0,78,1185	0/0:28,0:28:81.23:0,81,1209	0/0:12,0:12:33.09:0,33,498	1/1:0,22:21:60.20:839,60,0	1/1:0,25:25:63.21:881,63,0	1/1:0,29:29:78.19:1034,78,0	0/0:22,0:22:66.21:0,66,1032	0/0:22,0:22:57.19:0,57,891	0/0:14,0:14:36.12:0,36,557	0/0:23,0:23:69.22:0,69,1080	0/0:23,0:23:66.22:0,66,1049	0/0:20,0:20:57.19:0,57,905	0/0:22,0:22:66.19:0,66,1008	0/0:16,0:16:48.16:0,48,767	0/0:30,0:29:87.30:0,87,1387	0/0:20,0:20:60.14:0,60,906	1/1:0,22:22:59.89:819,60,0	1/1:0,15:14:36.12:503,36,0	1/1:0,23:23:51.48:713,51,0	0/0:22,0:22:66.21:0,66,1032	0/0:18,0:18:51.16:0,51,789	0/0:25,0:24:72.23:0,72,1127	1/1:0,16:16:48.16:671,48,0	0/0:14,0:14:42.14:0,42,672	1/1:0,20:20:51.17:710,51,0	0/0:7,0:7:21.03:0,21,299
chr10	104758776	.	CT	C	6029.12	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=10.680;DP=661;FS=7.503;HRun=4;HaplotypeScore=70.4535;InbreedingCoeff=0.9996;MQ=76.04;MQ0=0;MQRankSum=-2.171;QD=28.85;ReadPosRankSum=-1.564;VQSLOD=3.8209;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,1379	1/1:0,10:10:24.07:288,24,0	0/0:19,0:19:49.77:0,50,632	0/0:15,0:15:42.02:0,42,521	0/0:31,0:31:93.29:0,93,1260	1/1:1,28:29:66.20:791,66,0	1/1:3,21:24:51.16:611,51,0	1/1:2,33:35:99:1103,99,0	0/0:18,0:18:51.16:0,51,698	0/0:26,0:26:75.22:0,75,1029	0/0:22,0:22:63.21:0,63,881	0/0:20,0:20:57.19:0,57,797	0/0:23,0:23:63.18:0,63,832	0/0:15,0:15:42.13:0,42,572	0/0:30,0:30:81.27:0,81,1134	0/0:29,0:29:81.26:0,81,1117	0/0:36,0:36:99:0,102,1385	0/0:33,0:33:93.28:0,93,1281	1/1:2,16:18:48.10:534,48,0	1/1:0,23:23:63.15:730,63,0	1/1:0,30:30:78.24:935,78,0	0/0:18,0:18:54.16:0,54,714	0/0:20,0:20:60.20:0,60,828	0/0:19,0:19:57.19:0,57,798	1/1:2,15:17:42.13:499,42,0	0/0:27,0:27:78.26:0,78,1078	1/1:2,20:22:45.14:538,45,0	0/0:13,0:13:36.12:0,36,501
chr10	104759566	.	GGC	G	59.96	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=6.163;DP=331;FS=6.413;HRun=0;HaplotypeScore=83.4916;InbreedingCoeff=0.2846;MQ=67.29;MQ0=0;MQRankSum=-4.726;QD=1.46;ReadPosRankSum=1.314;VQSLOD=0.9746;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:55.03:0,55,827	1/1:0,5:5:9.03:128,9,0	0/0:12,0:10:28.20:0,28,338	0/0:9,0:8:17.04:0,17,200	0/0:7,0:7:17.93:0,18,238	0/0:9,0:9:6.36:0,6,21	0/0:19,0:19:9.05:0,9,57	0/1:15,0:15:8.63:9,0,13	0/0:14,0:14:40.02:0,40,688	0/0:19,0:19:42.08:0,42,618	0/0:6,0:6:17.79:0,18,243	0/0:15,0:15:44.77:0,45,659	0/0:10,0:10:30.06:0,30,468	0/0:8,0:8:24.08:0,24,433	0/0:14,0:14:40.01:0,40,673	0/0:9,0:9:21.07:0,21,348	0/0:19,0:19:54.15:0,54,923	0/0:14,0:14:41.98:0,42,624	0/1:7,0:7:7.78:8,0,19	0/0:15,0:15:2.03:0,2,6	0/0:19,0:19:7.79:0,8,41	0/0:10,0:10:19.70:0,20,397	0/0:10,0:10:29.73:0,30,327	0/0:5,0:5:15.05:0,15,272	0/0:12,0:12:8.06:0,8,42	0/0:10,0:9:26.96:0,27,343	0/1:14,0:14:12.55:24,0,13	0/0:2,0:2:5.99:0,6,71
chr10	104759567	.	GC	G	784.74	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=10.630;DP=317;FS=2.063;HRun=2;HaplotypeScore=71.8409;InbreedingCoeff=0.8390;MQ=68.37;MQ0=0;MQRankSum=-9.181;QD=7.69;ReadPosRankSum=4.245;VQSLOD=1.2910;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:58.80:0,59,607	1/1:5,0:5:8.75:50,9,0	0/0:11,0:10:27.62:0,28,229	0/0:9,0:8:10.61:0,11,133	0/0:7,0:7:11.41:0,11,129	1/1:4,5:9:0.34:92,0,0	1/1:8,9:17:24.97:178,25,0	1/1:6,4:10:7.93:54,8,0	0/0:15,0:15:42.97:0,43,529	0/0:18,0:18:39.08:0,39,451	0/0:6,0:6:17.75:0,18,171	0/0:15,0:15:41.52:0,42,456	0/0:10,0:10:27.84:0,28,304	0/0:8,0:8:24.07:0,24,309	0/0:14,0:14:39.95:0,40,480	0/0:9,0:9:20.97:0,21,240	0/0:18,0:18:50.38:0,50,617	0/0:14,0:14:36:0,36,444	1/1:3,4:7:14.49:95,14,0	1/1:4,9:13:23.78:168,24,0	1/1:12,4:16:0.72:36,1,0	0/0:10,0:10:23.10:0,23,274	0/0:10,0:10:29.58:0,30,262	0/0:5,0:5:15.05:0,15,199	1/1:5,7:12:8.47:77,8,0	0/0:10,0:9:21.47:0,21,222	1/1:3,10:13:31.35:225,31,0	0/0:2,0:2:2.96:0,3,19
chr10	104759572	.	GGTC	G	2694.53	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.415;DP=338;FS=4.073;HRun=0;HaplotypeScore=80.9113;InbreedingCoeff=0.9521;MQ=75.18;MQ0=0;MQRankSum=-10.658;QD=24.28;ReadPosRankSum=-0.435;VQSLOD=3.1590;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:53.43:0,53,1160	0/0:6,0:6:12.04:0,12,240	0/0:15,0:13:26.33:0,26,645	0/0:12,0:11:28.63:0,29,495	0/0:9,0:9:21.07:0,21,411	1/1:8,0:8:23.94:326,24,0	1/1:12,7:19:26.80:468,27,0	1/1:14,0:14:32.67:341,33,0	0/0:14,0:14:42.14:0,42,921	0/0:18,0:18:35.85:0,36,797	0/0:6,0:6:12.04:0,12,270	0/0:13,0:13:36.12:0,36,810	0/0:11,0:11:30.10:0,30,670	0/0:10,0:10:24.08:0,24,505	0/0:14,0:14:42.14:0,42,927	0/0:8,0:8:18.05:0,18,328	0/0:16,0:16:45.15:0,45,990	0/0:14,0:14:42.14:0,42,890	1/1:8,0:8:18.06:286,18,0	1/1:16,0:16:29.99:438,30,0	1/1:19,0:19:20.92:225,21,0	0/0:6,0:6:18.06:0,18,388	0/0:11,0:11:30.10:0,30,599	0/0:10,0:10:27.05:0,27,513	1/1:12,0:12:18:247,18,0	0/0:9,0:8:21.07:0,21,464	1/1:14,1:15:39.50:569,40,0	0/0:1,0:1:3.01:0,3,64
chr10	104759573	.	GTC	G	2054.35	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.083;DP=322;FS=6.979;HRun=0;HaplotypeScore=72.6067;InbreedingCoeff=0.9529;MQ=76.76;MQ0=0;MQRankSum=-10.593;QD=21.18;ReadPosRankSum=-0.184;VQSLOD=3.0940;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:57.13:0,57,1031	0/0:6,0:6:12.04:0,12,222	0/0:13,0:13:30.29:0,30,565	0/0:12,0:11:28.84:0,29,428	0/0:8,0:8:21.07:0,21,356	1/1:3,5:8:23.85:233,24,0	1/1:7,9:16:26.99:293,27,0	1/1:0,13:13:32.92:356,33,0	0/0:15,0:15:45.15:0,45,825	0/0:15,0:16:36.06:0,36,679	0/0:6,0:6:12.04:0,12,226	0/0:13,0:13:36.12:0,36,679	0/0:10,0:10:30.10:0,30,566	0/0:10,0:10:24.07:0,24,437	0/0:15,0:15:45.15:0,45,834	0/0:9,0:9:21.05:0,21,333	0/0:16,0:16:45.15:0,45,832	0/0:14,0:14:42.14:0,42,743	1/1:0,6:6:18.05:210,18,0	1/1:0,14:14:29.93:305,30,0	1/1:12,4:16:20.48:192,20,0	0/0:6,0:6:18.06:0,18,332	0/0:10,0:10:30.10:0,30,505	0/0:10,0:10:30.06:0,30,500	1/1:3,7:10:18:175,18,0	0/0:8,0:7:21.07:0,21,396	1/1:5,9:14:42.10:495,42,0	0/0:1,0:1:3.01:0,3,57
chr10	104759695	.	A	ATGTAGGCAC	17125.78	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-3.085;DP=507;FS=2.434;HRun=0;HaplotypeScore=128.9533;InbreedingCoeff=0.9929;MQ=73.90;MQ0=0;MQRankSum=-14.517;QD=96.21;ReadPosRankSum=-0.891;VQSLOD=5.0371;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,3582	0/0:10,0:10:30.10:0,30,978	0/0:20,0:20:53.29:0,53,1618	0/0:11,0:11:31.57:0,32,784	0/0:17,0:17:48.12:0,48,1483	1/1:2,13:21:45.15:2238,45,0	1/1:8,9:23:48.16:2221,48,0	1/1:9,9:27:75.17:3049,75,0	0/0:14,0:14:42.13:0,42,1246	0/0:23,0:23:69.23:0,69,2175	0/0:8,0:8:24.07:0,24,709	0/0:13,0:13:39.13:0,39,1201	0/0:13,0:13:36.12:0,36,1124	0/0:20,0:20:60.18:0,60,1801	0/0:16,0:16:48.14:0,48,1417	0/0:15,0:15:45.14:0,45,1375	0/0:30,0:30:90.23:0,90,2629	0/0:18,0:18:54.19:0,54,1650	1/1:7,1:19:41.98:1239,42,0	1/1:4,16:29:51.18:2414,51,0	1/1:2,5:14:18.06:891,18,0	0/0:12,0:12:33.11:0,33,1075	0/0:14,0:14:42.10:0,42,1096	0/0:17,0:17:48.16:0,48,1531	1/1:2,15:22:45.15:2243,45,0	0/0:11,0:11:33.09:0,33,933	1/1:2,17:23:57.20:2831,57,0	0/0:4,0:4:12.03:0,12,296
chr10	104759931	.	CG	C	2559.19	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.143;DP=641;FS=2.084;HRun=2;HaplotypeScore=97.1217;InbreedingCoeff=0.9985;MQ=82.14;MQ0=0;MQRankSum=-1.212;QD=31.99;ReadPosRankSum=1.205;VQSLOD=3.4550;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1730	0/0:9,0:9:27.09:0,27,400	0/0:25,0:25:60.96:0,61,1016	0/0:18,0:18:54.12:0,54,746	0/0:20,0:20:60.19:0,60,876	1/1:1,32:33:90.25:1148,90,0	1/1:1,29:30:75.20:954,75,0	0/0:31,0:31:85.90:0,86,577	0/0:28,0:28:84.27:0,84,1236	0/0:34,0:34:99:0,102,1494	0/0:9,0:9:27.09:0,27,398	0/0:17,0:17:51.17:0,51,764	0/0:24,0:24:72.21:0,72,1054	0/0:23,0:23:69.22:0,69,1013	0/0:29,0:29:87.29:0,87,1302	0/0:26,0:26:78.26:0,78,1165	0/0:52,0:52:99:0,150,2178	0/0:20,0:20:60.20:0,60,898	0/0:13,0:13:38.64:0,39,274	0/0:13,0:13:38.98:0,39,349	0/0:27,0:27:77.63:0,78,588	0/0:17,0:17:51.14:0,51,708	0/0:14,0:14:39.12:0,39,562	0/0:18,0:18:51.16:0,51,744	1/1:0,17:17:48.10:600,48,0	0/0:26,0:26:75.23:0,75,1085	0/0:20,0:20:53.71:0,54,422	0/0:8,0:8:24.04:0,24,298
chr10	104760215	.	GAC	G	256.27	PASS	AB=0.931;AC=19;AF=0.380;AN=50;BaseQRankSum=2.994;DP=569;FS=8.053;HRun=0;HaplotypeScore=87.0144;InbreedingCoeff=-0.2864;MQ=69.72;MQ0=12;MQRankSum=0.376;QD=0.69;ReadPosRankSum=-0.916;VQSLOD=0.7843;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:41,2:40:10.98:11,0,235	./.	./.	./.	0/1:16,1:17:14.02:14,0,154	0/0:16,0:16:2.90:0,3,16	1/1:20,0:17:5.80:34,6,0	0/0:14,0:13:1.25:0,1,3	0/1:7,2:9:23.03:23,0,79	0/1:26,0:26:23.09:23,0,55	1/1:12,1:13:3:32,3,0	0/0:14,0:14:3.01:0,3,44	0/1:21,4:25:28.04:28,0,347	0/1:11,4:15:16.83:17,0,161	0/1:29,0:29:38.06:38,0,206	0/0:14,0:14:9.02:0,9,113	0/1:28,3:33:88.61:89,0,219	0/1:21,1:23:18.63:19,0,249	0/0:9,0:9:1.25:0,1,3	0/0:13,0:13:14.82:0,15,111	1/1:35,0:35:2.07:7,2,0	0/1:18,1:19:26.06:26,0,38	0/0:13,0:13:24.05:0,24,304	0/1:34,0:33:9.70:10,0,457	0/0:13,0:13:2.74:0,3,12	0/1:15,0:15:17.06:17,0,122	0/1:14,0:13:7.60:8,0,19	0/0:11,0:11:3.46:0,3,25
chr10	104760261	.	CACACTAAA	C	735.04	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=5.770;DP=554;FS=25.967;HRun=0;HaplotypeScore=124.5527;InbreedingCoeff=0.5534;MQ=56.89;MQ0=7;MQRankSum=-3.825;QD=6.39;ReadPosRankSum=-0.520;VQSLOD=0.7365;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:99:0,100,2780	0/0:7,0:7:18.06:0,18,452	0/0:11,0:9:27.09:0,27,678	0/0:15,0:9:4.59:0,5,495	0/0:23,0:23:61.34:0,61,1504	0/1:19,0:19:8.92:9,0,44	1/1:5,15:18:5.26:53,5,0	1/1:12,0:12:24.16:474,24,0	0/0:20,0:20:54.19:0,54,1507	0/0:26,0:26:69.20:0,69,1781	0/0:7,0:7:12.04:0,12,306	0/0:19,0:18:48.16:0,48,1370	0/0:23,0:23:63.12:0,63,1860	0/0:16,0:16:31.35:0,31,1049	0/0:25,0:25:72.17:0,72,1980	0/0:24,0:24:61.45:0,61,1565	0/0:40,0:40:99:0,99,2501	0/0:24,0:23:62.50:0,63,1715	1/1:7,0:7:13.87:227,14,0	0/0:7,0:7:17.14:0,17,196	0/1:28,0:27:38.88:56,0,39	0/0:13,0:13:36.11:0,36,957	0/0:21,0:20:50.66:0,51,1452	0/0:41,0:39:99:0,100,3029	1/1:16,0:16:3:27,3,0	0/0:24,0:24:60.12:0,60,1612	0/1:13,0:10:44:44,0,44	0/0:14,0:14:36.08:0,36,847
chr10	104760263	.	CACTAAA	C	921.03	PASS	AB=0.528;AC=13;AF=0.232;AN=56;BaseQRankSum=6.256;DP=539;FS=15.091;HRun=0;HaplotypeScore=104.4055;InbreedingCoeff=0.7163;MQ=58.18;MQ0=7;MQRankSum=-3.332;QD=8.30;ReadPosRankSum=-2.003;VQSLOD=0.5507;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:99:0,100,2451	0/0:7,0:7:18.06:0,18,452	0/0:12,0:10:30.10:0,30,753	0/0:15,0:9:4.59:0,5,495	0/0:24,0:24:61.67:0,62,1429	0/1:2,17:19:10.74:47,0,11	1/1:20,0:18:5.08:105,5,0	1/1:11,0:11:32.05:534,32,0	0/0:19,0:19:54.19:0,54,1409	0/0:23,0:23:67.47:0,67,1650	0/0:6,0:6:15.05:0,15,346	0/0:19,0:18:51.18:0,51,1370	0/0:23,0:23:57.15:0,57,1534	0/0:16,0:16:31.35:0,31,895	0/0:24,0:24:52.83:0,53,1648	0/0:23,0:23:58.45:0,58,1451	0/0:38,0:38:93.19:0,93,2178	0/0:24,0:23:42.51:0,43,1431	1/1:7,0:7:17.76:270,18,0	0/0:7,0:7:7.24:0,7,54	1/1:27,0:26:6.31:70,6,0	0/0:11,0:11:33.11:0,33,850	0/0:21,0:20:50.64:0,51,1217	0/0:42,0:40:99:0,103,2734	1/1:1,13:14:0.47:2,0,0	0/0:23,0:23:66.01:0,66,1634	1/1:13,0:10:0.76:50,1,0	0/0:14,0:14:32.78:0,33,785
chr10	104760265	.	CTAAA	C	1006.90	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=6.859;DP=520;FS=3.260;HRun=0;HaplotypeScore=83.4083;InbreedingCoeff=0.8664;MQ=61.22;MQ0=7;MQRankSum=-3.938;QD=9.24;ReadPosRankSum=-2.092;VQSLOD=1.8281;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:99:0,103,2297	0/0:6,0:6:18.06:0,18,452	0/0:14,0:12:33.11:0,33,802	0/0:18,0:12:13.62:0,14,741	0/0:22,0:22:61.54:0,62,1286	1/1:18,0:18:5.97:72,6,0	1/1:17,1:17:5.01:51,5,0	1/1:0,11:11:32.24:535,32,0	0/0:19,0:19:54.19:0,54,1361	0/0:22,0:22:66.23:0,66,1587	0/0:6,0:6:15.05:0,15,342	0/0:18,0:18:51.18:0,51,1342	0/0:22,0:22:60.16:0,60,1359	0/0:18,0:18:37.30:0,37,893	0/0:23,0:23:51.64:0,52,1435	0/0:20,0:20:57.98:0,58,1370	0/0:34,0:34:92.92:0,93,1946	0/0:22,0:21:56.30:0,56,1214	1/1:0,7:7:17.85:274,18,0	1/1:4,2:6:4.55:50,5,0	1/1:1,23:25:11.85:123,12,0	0/0:12,0:12:36.12:0,36,890	0/0:21,0:21:50.52:0,51,1072	0/0:40,0:38:99:0,100,2365	0/1:13,0:13:0:0,0,0	0/0:23,0:23:63:0,63,1550	1/1:3,6:7:5.99:75,6,0	0/0:13,0:13:33.03:0,33,763
chr10	104760512	.	C	CACAT	4863.78	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=5.960;DP=687;FS=17.006;HRun=0;HaplotypeScore=131.8117;InbreedingCoeff=0.9616;MQ=65.73;MQ0=0;MQRankSum=-10.742;QD=32.00;ReadPosRankSum=-5.214;VQSLOD=2.1231;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:89.41:0,89,1635	0/0:14,0:14:33.09:0,33,582	0/0:29,0:26:53.01:0,53,1056	0/0:38,0:34:46.78:0,47,1256	0/0:26,0:26:63.22:0,63,1147	1/1:4,15:19:12.04:319,12,0	1/1:5,13:18:18.06:435,18,0	1/1:13,19:37:72.21:1593,72,0	0/0:29,0:29:81.26:0,81,1470	0/0:27,0:27:69.22:0,69,1203	0/0:15,0:15:42.14:0,42,783	0/0:30,0:30:87.28:0,87,1575	0/0:22,0:22:63.20:0,63,1105	0/0:24,0:24:72.25:0,72,1334	0/0:36,0:36:99:0,108,1937	0/0:29,0:29:81.28:0,81,1511	0/0:27,0:27:78.22:0,78,1365	0/0:22,0:22:63.22:0,63,1161	1/1:11,10:21:26.92:646,27,0	1/1:4,10:12:18.06:478,18,0	1/1:1,9:10:3.01:80,3,0	0/0:17,0:17:48.16:0,48,873	0/0:14,0:14:39.13:0,39,728	0/0:43,0:43:99:0,126,2283	1/1:7,10:17:24.08:637,24,0	0/0:28,0:28:81.28:0,81,1499	1/1:1,14:15:27.09:676,27,0	0/0:30,0:30:84.29:0,84,1567
chr10	104761017	.	CTATG	C	1705.06	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.602;DP=528;FS=8.710;HRun=0;HaplotypeScore=95.1863;InbreedingCoeff=0.9722;MQ=87.84;MQ0=0;MQRankSum=-6.146;QD=37.89;ReadPosRankSum=0.194;VQSLOD=3.5680;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,2695	0/0:6,0:6:18.02:0,18,439	0/0:26,0:26:75.20:0,75,1701	0/0:21,0:21:56.25:0,56,1344	0/0:15,0:15:42.14:0,42,1136	1/1:0,12:12:30.10:596,30,0	1/1:0,24:24:45.15:892,45,0	0/0:34,0:33:99:0,99,2480	0/0:10,0:10:30.10:0,30,788	0/0:10,0:10:30.09:0,30,780	0/0:14,0:14:42.12:0,42,1056	0/0:15,0:15:45.15:0,45,1231	0/0:11,0:11:33.06:0,33,787	0/0:16,0:16:48.13:0,48,1222	0/0:12,0:12:33.09:0,33,862	0/0:16,0:16:48.16:0,48,1304	0/0:48,0:48:99:0,144,3548	0/0:32,0:31:90.24:0,90,2338	0/0:18,0:18:46.03:0,46,1201	0/0:3,0:3:9.03:0,9,217	0/0:48,0:48:99:0,144,3898	0/0:10,0:10:30.09:0,30,739	0/0:9,0:9:24.08:0,24,636	0/0:31,0:30:93.24:0,93,2379	1/1:0,9:9:18.06:358,18,0	0/0:11,0:11:33.10:0,33,860	0/0:16,0:15:42.13:0,42,1081	0/0:15,0:15:45.15:0,45,1142
chr10	104761381	.	CCA	C	1105.40	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=6.736;DP=138;FS=2.919;HRun=0;HaplotypeScore=25.6406;InbreedingCoeff=0.6971;MQ=80.00;MQ0=0;MQRankSum=-5.407;QD=22.56;ReadPosRankSum=-0.380;VQSLOD=3.3838;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:27.09:0,27,482	0/0:2,0:2:6.01:0,6,83	0/1:5,0:5:0.74:1,0,109	0/0:11,0:11:1.83:0,2,328	0/0:3,0:3:6.02:0,6,116	1/1:0,7:7:18.06:275,18,0	1/1:2,6:8:9.03:137,9,0	1/1:2,4:6:12.04:176,12,0	0/0:5,0:5:15.05:0,15,289	0/0:2,0:2:6:0,6,68	0/0:2,0:2:6.02:0,6,115	0/0:4,0:4:8.70:0,9,127	0/0:3,0:3:6.02:0,6,116	0/0:5,0:5:12.04:0,12,230	0/0:4,0:4:12.04:0,12,204	0/0:7,0:7:18.95:0,19,333	0/0:6,0:6:17.73:0,18,264	0/0:2,0:2:4.57:0,5,62	1/1:2,3:5:9.03:137,9,0	1/1:0,5:5:12.04:184,12,0	1/1:0,8:8:12.01:184,12,0	0/0:8,0:8:24.07:0,24,417	0/0:2,0:2:6.02:0,6,116	0/0:6,0:6:7.18:0,7,193	1/1:0,2:2:6.02:83,6,0	0/0:3,0:3:9.03:0,9,159	1/1:0,3:3:8.99:111,9,0	0/0:5,0:5:15.05:0,15,289
chr10	104761526	.	T	TA	2705.34	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.483;DP=351;FS=13.857;HRun=0;HaplotypeScore=72.8593;InbreedingCoeff=0.9708;MQ=80.72;MQ0=2;MQRankSum=-11.813;QD=28.48;ReadPosRankSum=0.950;VQSLOD=2.7014;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.24:0,87,1177	0/0:4,0:4:8.99:0,9,103	0/0:26,0:18:50.17:0,50,587	0/0:30,0:20:29.19:0,29,492	0/0:10,0:10:30.06:0,30,397	1/1:3,11:14:32.59:420,33,0	1/1:2,8:10:17.56:245,18,0	1/1:4,17:21:53.66:717,54,0	0/0:16,0:16:48.16:0,48,670	0/0:13,0:13:39.13:0,39,545	0/0:7,0:7:21.06:0,21,279	0/0:11,0:11:33.09:0,33,442	0/0:7,0:7:21.05:0,21,275	0/0:7,0:7:21.07:0,21,293	0/0:16,0:16:48.12:0,48,649	0/0:11,0:11:33.11:0,33,461	0/0:17,0:17:51.16:0,51,695	0/0:6,0:6:18.06:0,18,252	1/1:2,7:9:23.81:298,24,0	1/1:0,17:17:45.08:594,45,0	1/1:1,7:8:10.80:111,11,0	0/0:7,0:7:21.07:0,21,294	0/0:5,0:5:15.04:0,15,190	0/0:16,0:16:48.13:0,48,637	1/1:1,8:9:19.25:282,19,0	0/0:10,0:10:30.09:0,30,391	1/1:1,6:7:16.32:243,16,0	0/0:7,0:7:21.06:0,21,276
chr10	104761537	.	TCC	T	2233.24	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.924;DP=375;FS=2.887;HRun=7;HaplotypeScore=82.8332;InbreedingCoeff=0.9665;MQ=75.90;MQ0=3;MQRankSum=-10.883;QD=19.42;ReadPosRankSum=-0.687;VQSLOD=1.7749;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.19:0,75,1249	1/1:6,0:6:8.04:33,8,0	0/0:26,0:17:33.02:0,33,472	0/0:33,0:22:31.46:0,31,597	0/0:12,0:12:36.12:0,36,598	1/1:2,10:12:30.09:377,30,0	1/1:0,11:11:18.06:224,18,0	1/1:16,9:25:41.92:445,42,0	0/0:19,0:19:54.07:0,54,875	0/0:10,0:10:24.08:0,24,411	0/0:7,0:7:18.06:0,18,299	0/0:12,0:12:30.09:0,30,487	0/0:7,0:7:21.07:0,21,367	0/0:7,0:7:18:0,18,314	0/0:16,0:16:45.15:0,45,764	0/0:13,0:13:36.11:0,36,592	0/0:16,0:16:45.15:0,45,777	0/0:8,0:8:21.06:0,21,339	1/1:4,7:11:17.78:228,18,0	1/1:4,17:21:41.69:514,42,0	1/1:1,11:12:9.03:113,9,0	0/0:6,0:6:18.05:0,18,266	0/0:7,0:8:18.06:0,18,288	0/0:16,0:16:39.12:0,39,650	1/1:2,7:9:24.05:281,24,0	0/0:8,0:8:21.07:0,21,367	1/1:0,8:8:18.06:228,18,0	0/0:6,0:6:17.93:0,18,258
chr10	104761538	.	CCCCCCCT	C	136.18	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.819;DP=375;FS=2.378;HRun=0;HaplotypeScore=123.6836;InbreedingCoeff=0.7832;MQ=77.17;MQ0=3;MQRankSum=-1.385;QD=22.70;ReadPosRankSum=0.437;VQSLOD=3.4240;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.72:0,73,2714	1/1:0,6:6:9.03:219,9,0	0/0:27,0:17:33.11:0,33,873	0/0:36,0:24:10.58:0,11,1256	0/0:12,0:12:36.12:0,36,1259	0/0:12,0:12:30:0,30,490	0/0:11,0:11:18.06:0,18,281	0/0:25,0:25:40.56:0,41,411	0/0:19,0:19:54.18:0,54,1773	0/0:10,0:10:24.08:0,24,827	0/0:7,0:7:18.06:0,18,614	0/0:12,0:12:30.10:0,30,1057	0/0:7,0:7:21.07:0,21,711	0/0:7,0:7:18.06:0,18,541	0/0:16,0:16:45.15:0,45,1454	0/0:13,0:13:36.11:0,36,1163	0/0:16,0:16:45.15:0,45,1717	0/0:8,0:8:21.07:0,21,752	0/0:10,0:10:21.07:0,21,355	0/0:19,0:19:45.02:0,45,738	0/0:12,0:12:9.03:0,9,156	0/0:6,0:6:15.05:0,15,434	0/0:8,0:8:18.06:0,18,572	0/0:17,0:17:42.13:0,42,1413	0/0:9,0:9:24.05:0,24,355	0/0:8,0:8:21.07:0,21,804	0/0:8,0:8:18.06:0,18,316	0/0:6,0:6:18.06:0,18,538
chr10	104761779	.	CTTTTT	C	1712.75	PASS	AB=0.844;AC=15;AF=0.268;AN=56;BaseQRankSum=10.425;DP=503;FS=0.000;HRun=18;HaplotypeScore=112.0499;InbreedingCoeff=0.6745;MQ=66.61;MQ0=3;MQRankSum=-8.915;QD=11.42;ReadPosRankSum=4.282;VQSLOD=-0.6401;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:39:74.55:0,75,1635	0/0:1,0:6:2.16:0,2,51	0/1:28,0:14:6.19:6,0,211	0/0:15,0:9:6.49:0,6,98	0/0:15,0:18:42.73:0,43,794	1/1:5,8:15:26.20:342,26,0	1/1:10,9:20:27.04:378,27,0	1/1:11,6:21:24.58:305,25,0	0/0:20,0:19:44.52:0,45,1054	0/0:20,0:23:60.20:0,60,1203	0/0:4,0:8:21.07:0,21,427	0/0:15,0:15:30.08:0,30,544	0/0:10,0:11:21.07:0,21,411	0/0:16,0:16:30.10:0,30,605	0/0:21,0:22:59.84:0,60,1253	0/0:12,0:14:36.12:0,36,818	0/0:28,0:31:74.06:0,74,1566	0/0:11,0:18:45.11:0,45,941	0/1:12,4:19:7.97:217,0,8	0/1:6,2:8:17.13:77,0,17	1/1:10,0:11:5:49,5,0	0/0:14,0:14:33.11:0,33,755	0/0:14,0:14:29.46:0,29,579	0/0:27,1:32:35.13:0,35,1624	1/1:3,4:9:8.63:101,9,0	0/0:17,0:18:39.13:0,39,877	1/1:8,9:18:29.62:421,30,0	0/0:11,0:14:36.12:0,36,813
chr10	104761994	.	T	TG	6629.32	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.452;DP=641;FS=6.305;HRun=2;HaplotypeScore=85.5834;InbreedingCoeff=0.9995;MQ=77.66;MQ0=0;MQRankSum=-1.051;QD=33.31;ReadPosRankSum=0.876;VQSLOD=4.6721;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1263	0/0:16,0:16:42.09:0,42,502	0/0:21,0:22:54.38:0,54,662	0/0:15,0:15:35.90:0,36,403	0/0:12,0:12:27.08:0,27,334	1/1:1,14:15:33.11:443,33,0	1/1:0,34:34:96.32:1287,96,0	1/1:3,16:19:44.32:539,44,0	0/0:31,0:31:87.27:0,87,1078	0/0:28,0:28:78.24:0,78,957	0/0:16,0:16:42.12:0,42,508	0/0:19,0:19:57.18:0,57,707	0/0:12,0:12:36.11:0,36,445	0/0:25,0:25:72.21:0,72,879	0/0:28,0:28:78.21:0,78,939	0/0:18,0:18:48.15:0,48,595	0/0:42,0:42:99:0,123,1525	0/0:23,0:23:66.21:0,66,815	1/1:2,15:17:48.14:626,48,0	1/1:2,12:14:27.56:364,28,0	1/1:4,49:53:99:1733,129,0	0/0:18,0:18:48.14:0,48,584	0/0:19,0:19:54.14:0,54,639	0/0:31,0:30:93.29:0,93,1152	1/1:1,22:23:63.20:837,63,0	0/0:20,0:20:57.16:0,57,675	1/1:2,22:24:60.20:801,60,0	0/0:12,0:12:33.10:0,33,409
chr10	104762595	.	CT	C	723.40	PASS	AB=0.859;AC=14;AF=0.250;AN=56;BaseQRankSum=12.205;DP=541;FS=18.163;HRun=3;HaplotypeScore=98.8070;InbreedingCoeff=0.7641;MQ=69.94;MQ0=11;MQRankSum=-10.567;QD=6.64;ReadPosRankSum=-1.770;VQSLOD=-0.5843;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1467	0/0:7,0:7:21.07:0,21,302	0/0:48,0:30:30.84:0,31,578	0/0:52,0:26:25.65:0,26,488	0/0:14,0:14:42.12:0,42,570	1/1:3,6:9:15.38:133,15,0	1/1:14,6:20:8:143,8,0	0/1:19,4:23:60.82:111,0,61	0/0:25,0:25:66.19:0,66,907	0/0:18,0:17:39.13:0,39,561	0/0:8,0:8:24.07:0,24,328	0/0:23,0:23:63.20:0,63,885	0/0:19,0:19:57.15:0,57,765	0/0:9,0:9:27.09:0,27,388	0/0:12,0:12:36.12:0,36,518	0/0:17,0:17:48.14:0,48,668	0/0:29,0:29:87.25:0,87,1206	0/0:12,0:12:36.06:0,36,471	1/1:13,4:17:5.04:93,5,0	1/1:2,6:7:18.28:120,18,0	0/1:11,2:13:7.97:36,0,8	0/0:13,0:13:39.12:0,39,536	0/0:19,0:19:57.19:0,57,812	0/0:38,0:38:99:0,111,1507	1/1:2,6:8:19.65:129,20,0	0/0:21,0:20:60.20:0,60,863	1/1:4,7:11:8.65:138,9,0	0/0:11,0:11:33.11:0,33,474
chr10	104762599	.	CCTT	C	2134.83	PASS	AB=0.889;AC=16;AF=0.286;AN=56;BaseQRankSum=13.242;DP=529;FS=28.384;HRun=0;HaplotypeScore=109.8787;InbreedingCoeff=0.8264;MQ=70.96;MQ0=11;MQRankSum=-9.522;QD=13.77;ReadPosRankSum=-3.327;VQSLOD=1.1326;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,110,2408	0/0:7,0:7:21.07:0,21,495	0/0:49,0:28:35.94:0,36,1000	0/1:51,0:24:26.19:26,0,675	0/0:13,0:13:39.10:0,39,785	1/1:3,6:9:26.65:281,27,0	1/1:13,6:19:25.91:360,26,0	1/1:22,4:26:34.29:466,34,0	0/0:22,0:22:63.22:0,63,1466	0/0:16,0:15:42.14:0,42,970	0/0:7,0:7:21.07:0,21,496	0/0:22,0:22:66.22:0,66,1496	0/0:18,0:18:54.19:0,54,1264	0/0:9,0:9:27.09:0,27,637	0/0:14,0:14:42.14:0,42,964	0/0:16,0:16:45.14:0,45,1015	0/0:29,0:29:87.27:0,87,1978	0/0:12,0:12:30.03:0,30,656	1/1:9,4:13:1.46:231,1,0	1/1:3,7:9:23.97:268,24,0	0/1:5,2:7:0.50:111,0,0	0/0:13,0:13:33.11:0,33,778	0/0:19,0:19:54.18:0,54,1247	0/0:38,0:38:99:0,108,2541	1/1:2,6:8:21.05:245,21,0	0/0:21,0:20:63.22:0,63,1444	1/1:5,7:12:20.82:340,21,0	0/0:11,0:11:33.11:0,33,779
chr10	104762602	.	T	TC	2304.69	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=12.250;DP=526;FS=21.973;HRun=2;HaplotypeScore=90.4903;InbreedingCoeff=0.8720;MQ=71.07;MQ0=11;MQRankSum=-9.123;QD=14.59;ReadPosRankSum=-4.090;VQSLOD=1.1709;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:94.29:0,94,1203	0/0:7,0:7:21.05:0,21,245	0/0:44,1:29:0.21:0,0,477	0/1:48,0:23:12.34:12,0,269	0/0:11,0:11:30.09:0,30,361	1/1:7,4:12:26.13:206,26,0	1/1:6,9:15:38.31:438,38,0	1/1:4,21:25:70.69:832,71,0	0/0:23,0:23:60.19:0,60,743	0/0:17,0:16:42.13:0,42,517	0/0:8,0:8:24.06:0,24,284	0/0:21,0:21:63.19:0,63,767	0/0:18,0:18:54.17:0,54,669	0/0:9,0:9:27.06:0,27,310	0/0:15,0:15:45.13:0,45,545	0/0:14,0:14:42.13:0,42,520	0/0:28,0:28:81.24:0,81,991	0/0:11,0:11:30.03:0,30,352	1/1:5,8:13:32.52:359,33,0	1/1:7,4:10:22.65:156,23,0	1/1:4,4:8:11.62:112,12,0	0/0:13,0:13:33.09:0,33,399	0/0:18,0:18:54.16:0,54,658	0/0:38,0:38:99:0,108,1310	1/1:7,4:11:20.01:124,20,0	0/0:21,0:20:60.18:0,60,733	1/1:7,4:11:31.90:271,32,0	0/0:11,0:11:33.10:0,33,408
chr10	104762727	.	C	CCCT	321.30	PASS	AB=1.000;AC=11;AF=0.212;AN=52;BaseQRankSum=6.262;DP=336;FS=2.492;HRun=0;HaplotypeScore=80.0075;InbreedingCoeff=0.7805;MQ=98.44;MQ0=1;MQRankSum=-2.879;QD=18.90;ReadPosRankSum=-3.233;VQSLOD=2.5144;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.28:0,87,1563	0/0:5,0:5:15.03:0,15,247	0/0:37,0:32:35.30:0,35,938	0/0:49,0:37:51.14:0,51,583	0/0:9,0:9:27.08:0,27,468	1/1:0,1:1:3.01:60,3,0	1/1:3,1:4:3.89:35,4,0	0/1:1,0:1:0:0,0,0	0/0:18,0:18:51.17:0,51,941	0/0:17,0:17:51.16:0,51,876	0/0:4,0:4:12.04:0,12,224	0/0:16,0:16:48.15:0,48,864	0/0:7,0:7:15.05:0,15,255	0/0:10,0:10:30.10:0,30,554	0/0:24,0:24:69.24:0,69,1258	0/0:10,0:10:30.10:0,30,559	0/0:15,0:15:42.14:0,42,779	0/0:14,0:14:39.13:0,39,708	./.	1/1:3,0:3:6.02:77,6,0	1/1:2,0:2:2.97:20,3,0	0/0:10,0:10:30.10:0,30,536	0/0:7,0:7:21.07:0,21,385	0/0:29,0:29:83.27:0,83,1442	1/1:4,2:6:15.05:267,15,0	0/0:6,0:6:18.06:0,18,336	./.	0/0:3,0:3:9.03:0,9,168
chr10	104762735	.	T	TCAAC	1377.07	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=5.991;DP=352;FS=1.703;HRun=0;HaplotypeScore=81.2754;InbreedingCoeff=0.8813;MQ=93.19;MQ0=1;MQRankSum=-5.247;QD=40.50;ReadPosRankSum=-4.451;VQSLOD=2.7051;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.27:0,78,1523	0/0:5,0:5:15.05:0,15,299	0/0:37,0:32:39.91:0,40,963	0/0:40,0:30:16.06:0,16,502	0/0:8,0:8:24.07:0,24,444	1/1:2,1:3:9.03:203,9,0	1/1:1,3:4:4.26:87,4,0	1/1:2,1:4:9.03:217,9,0	0/0:17,0:17:48.16:0,48,958	0/0:16,0:16:48.16:0,48,946	0/0:5,0:5:15.05:0,15,300	0/0:15,0:15:45.15:0,45,898	0/0:9,0:9:27.09:0,27,539	0/0:9,0:9:27.09:0,27,539	0/0:24,0:24:72.25:0,72,1437	0/0:14,0:14:39.13:0,39,770	0/0:17,0:17:48.16:0,48,941	0/0:13,0:13:36.12:0,36,719	1/1:3,0:3:9.03:169,9,0	1/1:2,4:6:12.04:288,12,0	1/1:2,2:7:3.90:85,4,0	0/0:12,0:12:33.11:0,33,630	0/0:8,0:8:24.08:0,24,478	0/0:29,0:29:72.21:0,72,1366	1/1:0,6:7:18.06:502,18,0	0/0:8,0:8:21.07:0,21,412	./.	0/0:3,0:3:9.03:0,9,180
chr10	104762920	.	T	TTTTTTTCTTTTTTTCC	15813.40	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=6.331;DP=577;FS=8.773;HRun=0;HaplotypeScore=246.6880;InbreedingCoeff=0.9270;MQ=66.49;MQ0=1;MQRankSum=-12.702;QD=79.07;ReadPosRankSum=-2.456;VQSLOD=2.9351;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.25:0,90,3380	0/0:8,0:8:24.08:0,24,884	0/0:34,0:24:43.66:0,44,601	0/1:27,0:21:7.54:8,0,585	0/0:18,0:18:54.09:0,54,1620	1/1:8,4:11:33.11:1608,33,0	1/1:15,1:15:36.06:1180,36,0	1/1:46,0:46:99:3990,119,0	0/0:17,0:17:51.09:0,51,1777	0/0:16,0:16:42.10:0,42,1636	0/0:13,0:13:36.11:0,36,1436	0/0:19,0:19:48.12:0,48,1810	0/0:20,0:20:60.18:0,60,1983	0/0:14,0:14:36.11:0,36,1353	0/0:26,0:26:69.15:0,69,2511	0/0:21,0:21:60.18:0,60,2329	0/0:25,0:25:48.15:0,48,1786	0/0:17,0:17:44.99:0,45,1219	1/1:24,2:21:48.02:1998,48,0	1/1:21,5:26:54.14:2218,54,0	1/1:15,0:15:33.07:1137,33,0	0/0:17,0:17:28.61:0,29,1433	0/0:15,0:15:36.08:0,36,1152	0/0:27,0:27:70.80:0,71,2354	1/1:14,5:19:51.05:1964,51,0	0/0:30,0:30:90.25:0,90,2925	1/1:10,2:12:33.04:1711,33,0	0/0:9,0:9:27.05:0,27,884
chr10	104762993	.	CCT	C	4270.99	PASS	AB=0.583;AC=15;AF=0.268;AN=56;BaseQRankSum=12.686;DP=647;FS=0.413;HRun=0;HaplotypeScore=80.6628;InbreedingCoeff=0.9365;MQ=60.68;MQ0=8;MQRankSum=-7.196;QD=32.11;ReadPosRankSum=-1.135;VQSLOD=6.5100;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.17:0,90,1554	0/0:7,0:7:18.05:0,18,329	0/0:43,0:16:17.46:0,17,473	0/0:42,0:23:48.41:0,48,701	0/0:36,0:36:99:0,108,1994	1/1:2,14:15:36.12:544,36,0	1/1:1,22:23:42.14:643,42,0	0/1:4,10:13:2.04:352,0,2	0/0:28,0:28:84.29:0,84,1571	0/0:16,0:15:45.15:0,45,827	0/0:16,0:16:44.87:0,45,829	0/0:32,0:32:93.31:0,93,1669	0/0:19,0:19:54.15:0,54,935	0/0:17,0:17:51.16:0,51,911	0/0:30,0:29:90.31:0,90,1643	0/0:29,0:29:87.28:0,87,1527	0/0:33,0:33:96.28:0,96,1601	0/0:21,0:21:63.21:0,63,1135	1/1:1,12:12:30.09:438,30,0	1/1:0,11:10:27.05:387,27,0	1/1:0,18:18:45.15:688,45,0	0/0:20,0:20:57.16:0,57,970	0/0:26,0:26:75.23:0,75,1358	0/0:31,0:31:79.14:0,79,1512	1/1:0,20:19:42.14:629,42,0	0/0:30,0:29:87.29:0,87,1596	1/1:1,17:17:39.13:590,39,0	0/0:5,0:5:12.04:0,12,228
chr10	104763439	.	GAGCAAGCCAGGGGA	G	732.83	PASS	AC=6;AF=0.136;AN=44;BaseQRankSum=4.479;DP=459;FS=6.988;HRun=0;HaplotypeScore=147.5602;InbreedingCoeff=0.7755;MQ=47.53;MQ0=42;MQRankSum=-3.489;QD=18.32;ReadPosRankSum=0.841;VQSLOD=1.9649;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:28:51.18:0,51,2796	0/0:5,0:5:10.28:0,10,463	0/0:5,0:4:2.98:0,3,21	./.	0/0:20,0:20:39.13:0,39,2512	1/1:12,1:9:3.01:122,3,0	./.	./.	0/0:21,0:20:51.18:0,51,2654	0/0:18,0:17:48.16:0,48,2573	0/0:12,0:12:27.09:0,27,1473	0/0:24,0:23:63.22:0,63,3734	0/0:20,0:20:51.16:0,51,2556	0/0:21,0:21:48.15:0,48,2529	0/0:25,0:24:54.19:0,54,3094	0/0:28,0:26:63.22:0,63,3747	0/0:35,0:33:42.14:0,42,2530	0/0:24,0:22:57.19:0,57,3401	./.	1/1:7,1:8:3.01:115,3,0	./.	0/0:20,0:19:42.14:0,42,2105	0/0:13,0:13:30.08:0,30,1539	0/0:20,0:18:36.09:0,36,2257	1/1:14,5:18:15.05:610,15,0	0/0:22,0:19:50.91:0,51,3156	./.	0/0:13,0:12:33.10:0,33,1562
chr10	104763721	.	A	ACC	9552.33	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-6.590;DP=765;FS=3.189;HRun=2;HaplotypeScore=95.7093;InbreedingCoeff=0.9974;MQ=89.28;MQ0=0;MQRankSum=-10.020;QD=49.24;ReadPosRankSum=-1.215;VQSLOD=4.2585;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,1940	1/1:0,6:6:15.05:281,15,0	0/0:29,0:29:78.14:0,78,1120	0/0:36,0:36:91.52:0,92,1259	0/0:29,0:29:75.25:0,75,1102	1/1:0,18:18:39.09:693,39,0	1/1:0,29:29:81.28:1516,81,0	1/1:1,22:25:69.22:1261,69,0	0/0:32,0:32:81.27:0,81,1192	0/0:48,0:48:99:0,135,1944	0/0:16,0:16:45.15:0,45,663	0/0:24,0:24:66.19:0,66,947	0/0:23,0:23:63.21:0,63,927	0/0:30,0:30:81.27:0,81,1193	0/0:40,0:40:99:0,114,1658	0/0:37,0:37:99:0,108,1571	0/0:27,0:27:78.26:0,78,1147	0/0:23,0:23:60.20:0,60,884	1/1:1,21:22:60.21:1088,60,0	1/1:0,12:12:36.12:673,36,0	1/1:1,45:46:99:2358,126,0	0/0:14,0:14:39.12:0,39,555	0/0:23,0:23:66.20:0,66,950	0/0:32,0:31:90.29:0,90,1304	1/1:0,22:22:60.21:1121,60,0	0/0:26,0:26:78.25:0,78,1128	1/1:1,13:14:30.10:561,30,0	0/0:35,0:35:99:0,102,1462
chr10	104764022	.	T	TA	3463.10	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.480;DP=512;FS=37.219;HRun=7;HaplotypeScore=91.6334;InbreedingCoeff=0.9917;MQ=61.77;MQ0=0;MQRankSum=-13.424;QD=23.09;ReadPosRankSum=-5.404;VQSLOD=0.1592;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.01:0,78,731	0/0:9,0:9:21.03:0,21,200	0/0:17,0:15:30.90:0,31,283	0/0:17,0:17:23.72:0,24,226	0/0:22,0:22:57.08:0,57,546	1/1:5,9:14:27:290,27,0	1/1:5,10:15:33.10:393,33,0	1/1:10,15:25:33.06:380,33,0	0/0:17,0:17:36.05:0,36,348	0/0:24,0:24:60.09:0,60,576	0/0:20,0:20:54.07:0,54,518	0/0:12,0:12:30.04:0,30,285	0/0:12,0:12:27.03:0,27,261	0/0:16,0:16:42.06:0,42,401	0/0:19,0:19:48.06:0,48,458	0/0:20,0:20:54.06:0,54,512	0/0:27,0:27:69.06:0,69,651	0/0:24,0:24:69.10:0,69,661	1/1:7,14:21:45.14:539,45,0	1/1:7,15:22:19.53:492,20,0	1/1:6,4:10:11.95:123,12,0	0/0:8,0:8:24.04:0,24,232	0/0:17,0:17:33.04:0,33,318	0/0:14,0:14:36.06:0,36,348	1/1:2,26:28:75.16:879,75,0	0/0:26,0:26:63.09:0,63,608	1/1:4,11:14:35.87:369,36,0	0/0:14,0:14:39.06:0,39,377
chr10	104764046	.	T	TA	4917.37	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.552;DP=486;FS=4.044;HRun=5;HaplotypeScore=87.6829;InbreedingCoeff=0.9955;MQ=68.51;MQ0=0;MQRankSum=-9.769;QD=30.54;ReadPosRankSum=-1.421;VQSLOD=4.7213;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.60:0,64,656	1/1:1,6:7:18.06:237,18,0	0/0:14,0:13:26.12:0,26,307	0/0:10,0:10:21.03:0,21,211	0/0:20,0:20:57.14:0,57,612	1/1:3,13:16:30.10:394,30,0	1/1:4,12:16:33.11:433,33,0	1/1:5,25:30:66.19:839,66,0	0/0:9,0:9:21.03:0,21,210	0/0:17,0:17:42.09:0,42,445	0/0:22,0:22:60.14:0,60,637	0/0:14,0:14:39.10:0,39,419	0/0:9,0:9:27.04:0,27,278	0/0:15,0:15:36.05:0,36,369	0/0:16,0:16:45.09:0,45,469	0/0:20,0:20:54.14:0,54,580	0/0:23,0:23:66.11:0,66,689	0/0:27,0:27:72.14:0,72,756	1/1:4,16:20:48.16:631,48,0	1/1:3,13:16:45.10:571,45,0	1/1:3,9:12:18.06:237,18,0	0/0:11,0:11:27.06:0,27,284	0/0:16,0:16:42.10:0,42,445	0/0:17,0:17:48.12:0,48,516	1/1:2,26:28:78.25:1024,78,0	0/0:20,0:20:57.14:0,57,607	1/1:2,14:16:42.14:550,42,0	0/0:22,0:22:54.13:0,54,580
chr10	104764088	.	ATG	A	179.43	PASS	AB=0.970;AC=14;AF=0.292;AN=48;BaseQRankSum=5.936;DP=532;FS=9.570;HRun=0;HaplotypeScore=101.4053;InbreedingCoeff=-0.0778;MQ=66.74;MQ0=7;MQRankSum=-1.280;QD=0.81;ReadPosRankSum=-0.868;VQSLOD=0.6657;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:16.12:0,16,151	0/1:5,0:5:9.44:9,0,19	./.	./.	0/1:16,1:17:20.49:20,0,122	0/1:19,0:19:40.86:41,0,54	1/1:24,0:24:8.45:45,8,0	0/1:30,0:30:8.04:8,0,43	0/1:5,1:6:23.52:24,0,36	0/0:11,0:11:3.01:0,3,44	0/0:15,0:15:5.99:0,6,49	0/0:18,0:18:14.99:0,15,175	0/0:14,0:13:11.97:0,12,132	0/0:12,0:15:17.97:0,18,180	0/1:16,1:17:8.59:9,0,174	0/0:19,0:19:27.03:0,27,293	0/0:24,0:23:27.44:0,27,324	0/0:34,0:33:50.91:0,51,585	0/0:22,0:21:8.76:0,9,93	0/1:15,0:15:46.19:46,0,73	./.	./.	0/0:15,0:15:11.99:0,12,115	0/0:27,0:26:33.11:0,33,486	1/1:30,0:30:5.83:34,6,0	0/1:21,1:22:20.59:21,0,53	0/1:21,0:21:28.97:56,0,29	0/1:15,0:14:12.18:12,0,293
chr10	104764130	.	GTGTA	G	1280.18	PASS	AB=0.947;AC=12;AF=0.222;AN=54;BaseQRankSum=5.594;DP=443;FS=6.999;HRun=0;HaplotypeScore=78.2750;InbreedingCoeff=0.2980;MQ=64.98;MQ0=4;MQRankSum=-3.868;QD=9.41;ReadPosRankSum=0.372;VQSLOD=1.1487;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:44.71:0,45,544	0/1:6,1:7:32.53:75,0,33	0/0:23,0:13:39.01:0,39,365	0/0:21,0:15:44.95:0,45,403	0/0:13,0:13:32.97:0,33,461	0/1:15,1:16:67.83:68,0,70	1/1:13,2:15:32.97:370,33,0	0/1:27,0:26:24.56:378,0,25	0/0:7,0:7:15.01:0,15,194	0/0:8,0:8:18.47:0,18,203	0/0:7,0:7:17.79:0,18,199	0/0:15,0:15:23.97:0,24,391	0/0:11,0:10:24.01:0,24,349	0/0:14,0:14:30.04:0,30,477	0/0:16,0:16:45.03:0,45,612	0/0:14,0:14:30.10:0,30,690	0/0:26,0:25:61.35:0,61,959	0/0:34,0:33:93.04:0,93,1525	0/1:12,0:12:89.57:137,0,90	0/1:11,2:13:76.38:113,0,76	1/1:16,0:16:20.78:149,21,0	./.	0/0:11,0:11:27:0,27,399	0/0:26,0:26:60.06:0,60,1106	1/1:10,1:10:2.64:58,3,0	0/0:15,0:15:33.45:0,33,359	0/1:19,0:18:19.95:92,0,20	0/0:14,0:14:13.91:0,14,579
chr10	104764132	.	GTA	G	1631.34	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=7.414;DP=410;FS=3.872;HRun=0;HaplotypeScore=59.1067;InbreedingCoeff=0.8319;MQ=67.53;MQ0=2;MQRankSum=-3.429;QD=12.36;ReadPosRankSum=0.118;VQSLOD=2.9638;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:38.64:0,39,362	1/1:6,0:6:8.99:75,9,0	0/0:23,0:13:39.01:0,39,365	0/0:23,0:17:47.95:0,48,430	0/0:12,0:12:23.90:0,24,322	1/1:14,2:16:20.95:219,21,0	1/1:15,0:15:32.94:272,33,0	1/1:26,0:25:59.67:429,60,0	0/0:6,0:6:3.87:0,4,88	0/0:8,0:8:20.99:0,21,187	0/0:7,0:7:14.78:0,15,131	0/0:10,0:10:17.93:0,18,203	0/0:9,0:9:17.99:0,18,207	0/0:12,0:12:24.01:0,24,263	0/0:15,0:15:24.83:0,25,325	0/0:13,0:13:27.05:0,27,395	0/0:24,0:23:56.88:0,57,646	0/0:32,0:31:77.95:0,78,941	0/1:13,0:13:11.06:169,0,11	1/1:6,8:14:14.94:157,15,0	1/1:15,0:15:20.78:149,21,0	0/0:1,0:1:3:0,3,25	0/0:10,0:10:20.95:0,21,211	0/0:24,0:24:60.02:0,60,770	1/1:2,8:9:6.01:70,6,0	0/0:12,0:12:20.49:0,20,219	1/1:13,4:16:34.61:289,35,0	0/0:13,0:13:23.88:0,24,279
chr10	104764642	.	T	TG	299.61	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.715;DP=526;FS=8.319;HRun=0;HaplotypeScore=87.0422;InbreedingCoeff=0.9081;MQ=55.69;MQ0=27;MQRankSum=-1.602;QD=5.76;ReadPosRankSum=4.637;VQSLOD=2.6117;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:41:99:0,107,880	0/0:11,0:11:29.92:0,30,245	0/0:49,0:9:23.10:0,23,159	0/0:31,0:8:5.56:0,6,24	0/0:21,0:20:50.23:0,50,399	1/1:14,8:20:26.60:187,27,0	1/1:10,3:12:10.56:77,11,0	0/0:14,0:13:30.93:0,31,237	0/0:19,0:18:39.60:0,40,298	0/0:18,0:17:50.04:0,50,373	0/0:19,0:19:52.30:0,52,404	0/0:14,0:14:37.69:0,38,279	0/0:8,0:8:11.20:0,11,109	0/0:8,0:8:19.47:0,19,149	0/0:18,0:18:44.34:0,44,358	0/0:14,0:14:29.33:0,29,226	0/0:30,0:29:74.91:0,75,666	0/0:14,0:14:33.13:0,33,202	0/0:24,0:22:53.73:0,54,444	0/0:24,0:24:62.68:0,63,499	0/0:9,0:9:12.40:0,12,96	0/0:6,0:6:11.95:0,12,104	0/0:10,0:10:20.37:0,20,178	0/0:13,0:13:32.35:0,32,283	1/1:13,4:17:25.01:173,25,0	0/0:23,0:21:60.98:0,61,503	0/0:22,0:20:53.53:0,54,436	0/0:12,0:12:34.97:0,35,251
chr10	104764651	.	T	TG	375.08	PASS	AB=0.957;AC=8;AF=0.143;AN=56;BaseQRankSum=9.163;DP=519;FS=5.187;HRun=0;HaplotypeScore=78.4594;InbreedingCoeff=0.6659;MQ=48.77;MQ0=28;MQRankSum=-4.574;QD=4.08;ReadPosRankSum=3.812;VQSLOD=2.9249;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:43:99:0,114,903	0/0:10,0:10:15.72:0,16,126	0/0:46,0:5:8.17:0,8,38	0/0:30,0:4:1.55:0,2,4	0/0:22,0:21:53.81:0,54,409	1/1:14,7:19:40.56:242,41,0	1/1:11,3:13:19.78:98,20,0	0/0:11,0:10:22.35:0,22,153	0/0:18,0:17:34.29:0,34,248	0/0:16,0:15:43.27:0,43,296	0/0:19,0:19:51.71:0,52,388	0/0:16,0:16:40.62:0,41,291	0/0:7,0:7:14.90:0,15,110	0/0:10,0:10:26.87:0,27,213	0/0:17,0:17:37.89:0,38,296	0/0:15,0:15:32.30:0,32,243	0/0:32,0:31:80.43:0,80,694	0/0:13,0:13:32.09:0,32,209	0/1:20,0:18:20.60:21,0,136	0/0:25,0:25:52.52:0,53,408	0/0:8,0:8:18.05:0,18,115	0/0:6,0:6:14.92:0,15,124	0/0:11,0:11:22.99:0,23,191	0/0:15,0:15:41.45:0,41,341	1/1:12,4:16:25.12:156,25,0	0/0:20,0:18:49.02:0,49,398	0/1:19,2:19:9.57:10,0,200	0/0:15,0:15:43.85:0,44,315
chr10	104765861	.	A	ACT	1443.63	PASS	AB=0.538;AC=9;AF=0.161;AN=56;BaseQRankSum=-3.449;DP=440;FS=1.149;HRun=0;HaplotypeScore=89.7868;InbreedingCoeff=0.7799;MQ=57.98;MQ0=14;MQRankSum=-2.826;QD=13.49;ReadPosRankSum=-3.152;VQSLOD=3.0708;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:41.78:0,42,321	0/0:7,0:8:9.39:0,9,65	0/0:40,0:12:20.19:0,20,249	0/0:35,0:12:10.57:0,11,208	0/0:12,0:10:11.90:0,12,94	0/0:7,0:7:6.95:0,7,60	0/0:15,0:15:35.86:0,36,281	1/1:35,0:35:74.16:764,74,0	0/0:11,0:11:11.01:0,11,86	0/0:15,0:14:25.40:0,25,286	0/0:9,0:8:8.87:0,9,65	0/0:16,0:16:19.64:0,20,138	0/0:4,0:3:5.94:0,6,43	0/0:8,0:8:9.46:0,9,75	0/0:14,0:14:20.85:0,21,157	0/0:14,0:14:17.97:0,18,147	0/0:29,0:29:59.86:0,60,437	0/0:10,0:10:23.88:0,24,181	1/1:18,0:17:39.76:326,40,0	0/1:2,12:14:0:0,0,0	1/1:25,0:22:38.40:313,38,0	0/0:7,0:7:2.90:0,3,25	0/0:7,0:7:11.94:0,12,99	0/0:23,0:23:32.78:0,33,246	0/0:7,0:7:8.95:0,9,70	0/0:13,0:12:17.97:0,18,152	1/1:15,0:15:23.71:197,24,0	0/0:4,0:4:11.98:0,12,98
chr10	104765886	.	T	TCTG	310.71	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.286;DP=489;FS=0.000;HRun=0;HaplotypeScore=102.8391;InbreedingCoeff=0.8775;MQ=83.16;MQ0=0;MQRankSum=-2.194;QD=38.84;ReadPosRankSum=1.217;VQSLOD=4.5569;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:81.26:0,81,1322	1/1:1,6:8:18.06:401,18,0	0/0:29,0:26:72.25:0,72,1157	0/0:25,0:21:44.82:0,45,688	0/0:14,0:14:36.12:0,36,587	0/0:12,0:12:36.12:0,36,588	0/0:28,0:28:81.23:0,81,1281	0/0:37,0:37:96.31:0,96,1516	0/0:13,0:13:36.12:0,36,588	0/0:16,0:16:45.15:0,45,726	0/0:12,0:12:30.10:0,30,490	0/0:20,0:20:57.15:0,57,886	0/0:3,0:3:8.99:0,9,116	0/0:15,0:15:42.12:0,42,646	0/0:16,0:16:36.12:0,36,587	0/0:16,0:16:45.15:0,45,726	0/0:36,0:36:99:0,99,1592	0/0:14,0:14:42.14:0,42,686	0/0:14,0:14:39.13:0,39,627	0/0:15,0:15:21.06:0,21,318	0/0:23,0:22:54.13:0,54,835	0/0:7,0:7:11.87:0,12,195	0/0:9,0:9:24.08:0,24,392	0/0:26,0:26:72.08:0,72,1175	0/0:12,0:12:30.10:0,30,490	0/0:14,0:14:42.14:0,42,686	0/0:14,0:14:42.11:0,42,658	0/0:4,0:4:12.04:0,12,196
chr10	104766283	.	GA	G	632.48	PASS	AB=0.854;AC=15;AF=0.268;AN=56;BaseQRankSum=6.991;DP=591;FS=4.237;HRun=15;HaplotypeScore=59.2312;InbreedingCoeff=0.4647;MQ=60.58;MQ0=19;MQRankSum=0.230;QD=3.26;ReadPosRankSum=2.918;VQSLOD=-0.2860;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,4:46:36.78:0,37,676	1/1:2,3:5:10.90:63,11,0	0/1:23,0:2:1.91:6,0,2	0/1:17,0:6:2.28:2,0,21	0/0:24,1:26:28.60:0,29,348	0/0:10,0:18:17.52:0,18,122	0/0:11,0:30:44.06:0,44,272	1/1:10,8:20:26.74:150,27,0	0/0:17,1:18:12.97:0,13,262	0/0:19,1:21:7.56:0,8,176	0/0:16,0:18:2.11:0,2,184	0/0:19,0:19:14.12:0,14,231	0/0:6,0:11:14.78:0,15,107	0/0:14,0:14:7.78:0,8,189	0/0:16,0:18:27.15:0,27,230	0/0:14,2:16:7.73:0,8,191	0/1:20,6:29:56.78:57,0,281	0/1:20,3:27:21.46:21,0,277	1/1:13,12:25:2.37:204,2,0	1/1:4,10:15:31.47:194,31,0	0/1:8,6:14:39.80:40,0,61	0/0:29,1:32:32.16:0,32,444	0/0:24,0:24:41.83:0,42,354	0/0:21,3:26:1.70:0,2,302	0/0:8,0:22:25.57:0,26,127	0/0:22,0:25:24.99:0,25,251	1/1:7,7:15:10.77:64,11,0	0/0:9,0:12:17.81:0,18,138
chr10	104767408	.	A	ATAGTGATGC	9603.09	PASS	AB=0.682;AC=11;AF=0.196;AN=56;BaseQRankSum=11.684;DP=643;FS=0.979;HRun=0;HaplotypeScore=174.9208;InbreedingCoeff=0.8733;MQ=66.70;MQ0=0;MQRankSum=-13.236;QD=92.34;ReadPosRankSum=-0.692;VQSLOD=4.5443;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.19:0,69,1903	0/1:8,7:15:67.72:1155,0,68	0/0:30,0:29:84.24:0,84,2377	0/0:24,0:23:60.21:0,60,1815	0/0:27,0:27:81.28:0,81,2467	0/0:31,0:31:90.28:0,90,2588	0/0:14,0:14:39.13:0,39,1184	1/1:10,7:15:39.13:1497,39,0	0/0:27,0:27:78.27:0,78,2406	0/0:37,0:37:99:0,111,3283	0/0:23,0:23:66.23:0,66,1919	0/0:24,0:24:72.25:0,72,2169	0/0:19,0:19:57.20:0,57,1765	0/0:15,0:15:45.15:0,45,1423	0/0:29,0:29:84.27:0,84,2502	0/0:23,0:23:69.24:0,69,2155	0/0:37,0:37:99:0,102,3035	0/0:22,0:21:51.14:0,51,1405	1/1:9,9:17:48.16:2089,48,0	1/1:10,14:24:45.15:2200,45,0	1/1:4,2:7:9.03:445,9,0	0/0:32,0:32:96.28:0,96,2788	0/0:26,0:26:72.21:0,72,2084	0/0:19,0:19:57.20:0,57,1757	0/0:17,0:17:51.17:0,51,1553	0/0:19,0:19:57.20:0,57,1711	1/1:3,14:20:45.15:2218,45,0	0/0:21,0:21:63.22:0,63,1966
chr10	104767605	.	C	CAGAGG	4742.95	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.217;DP=544;FS=6.417;HRun=0;HaplotypeScore=111.2010;InbreedingCoeff=0.9875;MQ=57.16;MQ0=1;MQRankSum=-10.128;QD=84.70;ReadPosRankSum=-0.315;VQSLOD=6.6343;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.19:0,54,1249	0/0:8,0:8:21.07:0,21,482	0/0:28,0:13:35.16:0,35,714	0/0:23,0:12:36.11:0,36,736	0/0:31,0:31:90.29:0,90,2027	0/0:31,0:31:90.31:0,90,2066	0/0:19,0:19:57.18:0,57,1241	1/1:3,15:16:48.12:1459,48,0	0/0:13,0:13:39.13:0,39,890	0/0:27,0:27:81.28:0,81,1888	0/0:25,0:25:75.24:0,75,1679	0/0:18,0:18:54.19:0,54,1259	0/0:13,0:13:39.13:0,39,879	0/0:21,0:21:60.21:0,60,1361	0/0:24,0:24:72.24:0,72,1634	0/0:15,0:15:45.15:0,45,1031	0/0:22,0:22:66.23:0,66,1516	0/0:21,0:21:57.18:0,57,1282	1/1:0,5:5:15.05:499,15,0	1/1:0,16:17:48.16:1590,48,0	1/1:0,6:6:12.01:398,12,0	0/0:31,0:31:87.28:0,87,1978	0/0:17,0:17:51.18:0,51,1189	0/0:17,0:17:48.16:0,48,1079	0/0:20,0:20:57.20:0,57,1304	0/0:26,0:26:75.24:0,75,1622	1/1:0,8:8:24.08:797,24,0	0/0:19,0:19:57.20:0,57,1328
chr10	104768089	.	A	AAG	6813.05	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.805;DP=739;FS=4.462;HRun=0;HaplotypeScore=96.6515;InbreedingCoeff=0.9996;MQ=61.86;MQ0=0;MQRankSum=-2.371;QD=45.42;ReadPosRankSum=-0.896;VQSLOD=5.4969;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,1668	1/1:0,15:15:42.14:787,42,0	0/0:31,0:30:81.25:0,81,1141	0/0:28,0:25:72.24:0,72,1011	0/0:29,0:29:87.29:0,87,1281	0/0:28,0:28:84.26:0,84,1197	0/0:21,1:22:60.20:0,60,884	1/1:5,25:29:69.21:1178,69,0	0/0:32,0:32:90.29:0,90,1306	0/0:28,0:28:84.28:0,84,1220	0/0:19,0:19:54.18:0,54,791	0/0:21,0:21:63.21:0,63,928	0/0:18,0:18:51.17:0,51,751	0/0:24,0:24:72.24:0,72,1060	0/0:34,0:34:99:0,99,1434	0/0:33,0:33:99:0,99,1439	0/0:28,0:27:81.27:0,81,1190	0/0:21,0:21:60.20:0,60,884	1/1:0,10:9:24.08:450,24,0	1/1:2,29:30:75.26:1405,75,0	1/1:0,20:20:51.17:952,51,0	0/0:34,0:34:99:0,99,1457	0/0:23,1:24:66.20:0,66,934	0/0:26,0:26:72.22:0,72,1022	0/0:23,0:23:66.22:0,66,970	0/0:32,0:31:93.31:0,93,1370	1/1:2,39:42:99:2042,111,0	0/0:13,0:12:36.12:0,36,530
chr10	104768330	.	TTTC	T	482.05	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=5.828;DP=569;FS=14.633;HRun=0;HaplotypeScore=104.6705;InbreedingCoeff=0.2512;MQ=62.79;MQ0=2;MQRankSum=0.011;QD=3.52;ReadPosRankSum=-2.692;VQSLOD=0.2299;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.25:0,81,1614	1/1:1,9:9:26.83:403,27,0	0/0:12,0:11:32.18:0,32,433	0/0:10,0:7:17.91:0,18,269	0/0:25,0:25:51.56:0,52,1264	0/0:26,0:26:66.20:0,66,1388	0/0:13,0:13:39.13:0,39,798	0/1:38,0:36:29.07:97,0,29	0/0:17,0:17:48.15:0,48,970	0/0:25,0:25:68.44:0,68,1212	0/0:22,0:22:39.56:0,40,1178	0/0:17,0:17:48.14:0,48,948	0/0:14,0:14:42.14:0,42,861	0/0:19,0:19:57.20:0,57,1161	0/0:17,0:17:51.18:0,51,1061	0/0:23,0:23:69.21:0,69,1362	0/0:23,0:23:66.23:0,66,1371	0/0:25,0:24:69.07:0,69,1242	0/1:24,0:22:10.44:10,0,98	0/1:29,0:29:53.89:54,0,55	0/0:10,0:10:9.97:0,10,24	0/0:22,0:22:63.20:0,63,1237	0/0:25,0:25:72.21:0,72,1423	0/0:9,0:9:27.06:0,27,467	0/0:21,0:21:57.17:0,57,1138	0/0:20,0:20:60.20:0,60,1213	0/1:36,0:36:46.23:46,0,60	0/0:8,0:8:21.07:0,21,442
chr10	104768331	.	TTC	T	1548.48	PASS	AB=0.957;AC=11;AF=0.196;AN=56;BaseQRankSum=15.418;DP=559;FS=11.443;HRun=0;HaplotypeScore=87.3105;InbreedingCoeff=0.9146;MQ=62.74;MQ0=3;MQRankSum=-0.735;QD=10.98;ReadPosRankSum=-0.954;VQSLOD=2.5041;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.15:0,81,1284	1/1:9,1:9:26.95:238,27,0	0/0:12,0:11:31.11:0,31,383	0/0:9,0:6:17.94:0,18,224	0/0:25,0:25:60.34:0,60,1076	0/0:26,0:26:66.19:0,66,1118	0/0:13,0:13:39.12:0,39,635	1/1:34,2:34:80.25:457,80,0	0/0:17,0:17:48.15:0,48,786	0/0:24,0:24:68.37:0,68,968	0/0:20,0:20:45.34:0,45,951	0/0:18,0:18:51.12:0,51,785	0/0:14,0:14:42.13:0,42,686	0/0:19,0:19:57.19:0,57,941	0/0:17,0:17:51.17:0,51,862	0/0:23,0:23:69.21:0,69,1113	0/0:24,0:24:69.22:0,69,1136	0/0:25,0:24:69.06:0,69,1009	0/1:21,1:19:4.40:150,0,4	1/1:27,1:28:47.45:317,47,0	1/1:10,0:10:21.43:91,21,0	0/0:22,0:22:66.16:0,66,1021	0/0:25,0:25:72.21:0,72,1157	0/0:9,0:9:27.04:0,27,377	0/0:20,0:20:57.16:0,57,914	0/0:20,0:20:60.20:0,60,981	1/1:33,2:35:75.77:475,76,0	0/0:7,0:7:21.07:0,21,356
chr10	104768332	.	TC	T	4186.01	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.178;DP=556;FS=11.062;HRun=1;HaplotypeScore=67.2377;InbreedingCoeff=0.9936;MQ=62.84;MQ0=3;MQRankSum=-1.698;QD=30.33;ReadPosRankSum=-1.042;VQSLOD=1.9159;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.15:0,81,1020	1/1:10,0:9:26.51:168,27,0	0/0:12,0:11:15.28:0,15,287	0/0:9,0:6:18.01:0,18,198	0/0:25,0:26:68.79:0,69,880	0/0:23,0:23:66.21:0,66,876	0/0:13,0:13:39.11:0,39,503	1/1:3,31:32:93.12:1120,93,0	0/0:18,0:18:51.13:0,51,643	0/0:24,0:24:71.07:0,71,796	0/0:19,0:20:50.84:0,51,748	0/0:17,0:17:51.13:0,51,630	0/0:15,0:15:45.12:0,45,567	0/0:20,0:20:57.15:0,57,725	0/0:18,0:18:54.16:0,54,701	0/0:24,0:24:72.20:0,72,909	0/0:24,0:24:69.21:0,69,897	0/0:25,0:24:69.04:0,69,807	1/1:11,11:19:37.19:515,37,0	1/1:2,26:28:67.63:785,68,0	1/1:0,10:10:24.08:334,24,0	0/0:22,0:22:66.14:0,66,811	0/0:24,0:24:72.20:0,72,911	0/0:9,0:9:27.04:0,27,311	0/0:19,0:19:57.16:0,57,726	0/0:21,0:21:63.18:0,63,794	1/1:8,26:34:97.24:1265,97,0	0/0:7,0:7:21.07:0,21,279
chr10	104768860	.	GA	G	564.88	PASS	AC=4;AF=0.080;AN=50;BaseQRankSum=7.024;DP=593;FS=40.661;HRun=2;HaplotypeScore=81.0044;InbreedingCoeff=0.9491;MQ=58.41;MQ0=3;MQRankSum=-6.921;QD=20.17;ReadPosRankSum=-1.769;VQSLOD=1.0314;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,163,2422	0/0:12,0:12:18.06:0,18,269	0/0:11,0:4:12.03:0,12,138	0/0:21,0:18:53.88:0,54,675	0/0:24,0:24:72.24:0,72,1069	0/0:29,0:29:81.27:0,81,1213	0/0:25,0:25:72.22:0,72,1027	./.	0/0:27,0:26:78.25:0,78,1148	0/0:30,0:30:81.01:0,81,1213	0/0:24,0:24:69.23:0,69,1023	0/0:22,0:22:63.20:0,63,925	0/0:25,0:23:63.20:0,63,919	0/0:28,0:23:66.22:0,66,983	0/0:19,0:19:57.19:0,57,854	0/0:23,0:23:69.23:0,69,1034	0/0:23,0:23:69.21:0,69,1011	0/0:19,0:19:57.17:0,57,831	./.	1/1:1,17:18:45.08:561,45,0	./.	0/0:27,0:27:81.27:0,81,1195	0/0:31,0:31:93.32:0,93,1393	0/0:34,0:34:99:0,102,1499	0/0:17,0:17:51.17:0,51,759	0/0:20,0:20:57.19:0,57,854	1/1:2,8:4:9.03:117,9,0	0/0:19,0:19:57.19:0,57,854
chr10	104768969	.	A	AT	302	PASS	AB=0.706;AC=9;AF=0.161;AN=56;BaseQRankSum=7.134;DP=615;FS=0.000;HRun=2;HaplotypeScore=65.9905;InbreedingCoeff=0.7208;MQ=55.63;MQ0=34;MQRankSum=-6.806;QD=6.04;ReadPosRankSum=0.918;VQSLOD=0.5585;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:99:0,123,1581	1/1:1,2:2:5.99:49,6,0	0/0:21,0:12:27.54:0,28,319	0/0:11,0:7:14.12:0,14,123	0/0:50,0:41:99:0,108,1402	0/0:29,0:27:81.25:0,81,1036	0/0:13,0:13:39.13:0,39,506	0/0:7,0:2:5.98:0,6,56	0/0:25,0:23:63.20:0,63,817	0/0:41,0:36:96.30:0,96,1224	0/0:32,0:26:75.23:0,75,954	0/0:37,0:32:93.27:0,93,1178	0/0:17,0:16:45.15:0,45,583	0/0:30,0:26:66.20:0,66,843	0/0:22,0:21:57.19:0,57,740	0/0:23,0:20:60.20:0,60,778	0/0:19,0:19:57.18:0,57,737	0/0:25,0:23:60.19:0,60,778	0/1:7,5:8:18.56:110,0,19	1/1:13,9:16:23.98:212,24,0	1/1:5,1:3:3:25,3,0	0/0:21,0:17:48.14:0,48,609	0/0:24,0:24:66.18:0,66,824	0/0:21,0:19:57.14:0,57,720	0/0:14,0:12:30.10:0,30,390	0/0:34,0:26:78.24:0,78,992	1/1:5,2:6:5.99:48,6,0	0/0:7,0:7:12.04:0,12,155
chr10	104768972	.	T	TAC	523.28	PASS	AB=0.868;AC=10;AF=0.179;AN=56;BaseQRankSum=7.679;DP=604;FS=2.950;HRun=0;HaplotypeScore=77.0358;InbreedingCoeff=0.6844;MQ=55.94;MQ0=31;MQRankSum=-5.950;QD=9.87;ReadPosRankSum=-0.041;VQSLOD=3.3210;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:99:0,123,1857	1/1:1,2:2:6.02:75,6,0	0/0:20,0:12:23.06:0,23,404	0/0:10,0:7:9.34:0,9,148	0/0:51,0:42:99:0,114,1657	0/0:29,0:27:81.26:0,81,1215	0/0:14,0:14:42.13:0,42,621	0/1:4,0:2:12.01:12,0,15	0/0:24,0:22:63.20:0,63,936	0/0:42,0:38:96.30:0,96,1394	0/0:32,0:26:76.09:0,76,1098	0/0:35,0:31:93.29:0,93,1369	0/0:16,0:15:42.14:0,42,640	0/0:28,0:24:63.21:0,63,964	0/0:22,0:21:63.18:0,63,919	0/0:25,0:22:63.20:0,63,942	0/0:17,0:17:51.17:0,51,780	0/0:25,0:23:57.19:0,57,870	0/1:9,5:10:3.15:174,0,3	1/1:12,8:15:24.08:299,24,0	1/1:4,1:3:3.01:38,3,0	0/0:21,0:17:45.15:0,45,688	0/0:24,0:24:69.15:0,69,945	0/0:20,0:18:54.18:0,54,818	0/0:14,0:12:33.10:0,33,482	0/0:34,0:26:78.24:0,78,1138	1/1:4,2:5:6.02:74,6,0	0/0:6,0:6:9.03:0,9,138
chr10	104769027	.	CCCA	C	609.06	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=7.948;DP=510;FS=0.796;HRun=0;HaplotypeScore=85.5847;InbreedingCoeff=0.9162;MQ=78.48;MQ0=0;MQRankSum=-6.320;QD=22.56;ReadPosRankSum=-4.188;VQSLOD=2.2950;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,2641	1/1:0,1:1:2.60:10,3,0	0/0:29,0:27:65.33:0,65,1272	0/0:21,0:21:43.10:0,43,1085	0/0:28,0:27:78.27:0,78,1658	0/0:24,0:24:66.21:0,66,1365	0/0:20,0:20:60.21:0,60,1290	1/1:6,2:8:17.94:190,18,0	0/0:22,0:22:57.18:0,57,1209	0/0:28,0:28:81.24:0,81,1638	0/0:16,0:16:48.16:0,48,1011	0/0:27,0:27:75.13:0,75,1524	0/0:12,0:12:36.11:0,36,740	0/0:20,0:20:57.19:0,57,1205	0/0:26,0:26:78.25:0,78,1630	0/0:24,0:24:69.23:0,69,1497	0/0:18,0:18:54.16:0,54,1128	0/0:22,0:22:60.18:0,60,1239	1/1:2,4:6:15.02:217,15,0	1/1:2,7:8:17.95:249,18,0	1/1:0,3:2:6.02:98,6,0	0/0:21,0:21:60.19:0,60,1222	0/0:19,0:19:57.20:0,57,1188	0/0:22,0:22:66.23:0,66,1432	0/0:15,1:16:16.51:0,17,941	0/0:19,0:19:57.16:0,57,1192	./.	0/0:5,0:5:15.05:0,15,325
chr10	104769116	.	A	AC	2554.07	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.799;DP=553;FS=6.501;HRun=1;HaplotypeScore=65.6739;InbreedingCoeff=0.9848;MQ=97.86;MQ0=0;MQRankSum=-8.462;QD=36.49;ReadPosRankSum=0.567;VQSLOD=3.8343;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1683	1/1:0,6:6:9.03:135,9,0	0/0:28,0:28:78.22:0,78,970	0/0:30,0:30:90.28:0,90,1124	0/0:25,0:25:75.24:0,75,973	0/0:21,0:21:63.20:0,63,818	0/0:20,0:20:57.19:0,57,740	1/1:1,13:14:39.13:584,39,0	0/0:16,0:16:48.16:0,48,623	0/0:23,0:23:69.22:0,69,895	0/0:14,0:14:39.13:0,39,505	0/0:27,0:27:78.25:0,78,1013	0/0:14,0:14:42.14:0,42,545	0/0:14,0:14:39.13:0,39,506	0/0:29,0:29:87.26:0,87,1101	0/0:26,0:25:72.22:0,72,921	0/0:19,0:19:57.19:0,57,740	0/0:20,0:20:60.13:0,60,743	1/1:0,17:17:42.14:629,42,0	1/1:1,15:16:45.15:673,45,0	1/1:0,12:12:33.11:494,33,0	0/0:18,0:18:51.17:0,51,662	0/0:16,0:16:48.16:0,48,623	0/0:26,0:26:75.20:0,75,955	0/0:16,0:16:45.14:0,45,571	0/0:20,0:20:60.20:0,60,779	1/1:0,5:5:15.05:224,15,0	0/0:16,0:16:48.11:0,48,580
chr10	104769301	.	AGGTGT	A	631.19	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.660;DP=469;FS=45.321;HRun=0;HaplotypeScore=101.1240;InbreedingCoeff=0.9279;MQ=71.22;MQ0=2;MQRankSum=-8.661;QD=20.36;ReadPosRankSum=-3.692;VQSLOD=0.9865;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:95.45:0,95,2960	1/1:0,0:1:2.98:22,3,0	0/0:21,0:12:35.33:0,35,1009	0/0:28,0:16:39.26:0,39,856	0/0:18,0:18:54.19:0,54,1703	0/0:17,0:17:48.16:0,48,1389	0/0:25,0:25:66.23:0,66,1881	1/1:0,6:7:12.04:190,12,0	0/0:23,0:23:69.24:0,69,2163	0/0:25,0:25:73.13:0,73,2222	0/0:17,0:17:48.16:0,48,1516	0/0:21,0:21:60.14:0,60,1776	0/0:8,0:8:24.08:0,24,783	0/0:17,0:17:41.91:0,42,1253	0/0:25,0:25:66.22:0,66,1988	0/0:22,0:22:63.22:0,63,1826	0/0:22,0:22:52.82:0,53,1644	0/0:18,0:18:48.16:0,48,1503	1/1:0,4:4:9.03:145,9,0	1/1:1,6:7:20.79:139,21,0	1/1:4,1:4:8.63:46,9,0	0/0:22,0:22:54.89:0,55,1697	0/0:20,0:20:57.18:0,57,1755	0/0:16,0:16:45.15:0,45,1353	0/0:8,0:8:21.07:0,21,602	0/0:16,0:16:42.62:0,43,1246	1/1:0,7:7:20.95:261,21,0	0/0:14,0:14:39.13:0,39,1262
chr10	104769307	.	A	AC	814.99	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.828;DP=461;FS=57.704;HRun=0;HaplotypeScore=66.4583;InbreedingCoeff=0.9302;MQ=73.76;MQ0=1;MQRankSum=-8.621;QD=18.52;ReadPosRankSum=-4.669;VQSLOD=0.3865;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1463	0/0:1,0:1:2.98:0,3,21	0/0:21,0:14:39.11:0,39,526	0/0:27,0:16:38.28:0,38,447	0/0:19,0:19:54.18:0,54,754	0/0:19,0:19:57.19:0,57,797	0/0:25,0:25:75.21:0,75,1027	1/1:9,7:16:27.05:302,27,0	0/0:25,0:25:75.25:0,75,1048	0/0:26,0:26:71.99:0,72,981	0/0:15,0:15:42.14:0,42,588	0/0:20,0:20:57.16:0,57,773	0/0:9,0:9:27.08:0,27,360	0/0:13,0:13:39.13:0,39,543	0/0:23,0:23:60.19:0,60,824	0/0:17,0:17:51.17:0,51,713	0/0:19,0:19:57.15:0,57,775	0/0:13,0:13:36.12:0,36,500	1/1:2,4:6:9.01:85,9,0	1/1:0,6:7:21.06:257,21,0	1/1:0,4:4:9.02:98,9,0	0/0:17,0:17:51.17:0,51,713	0/0:20,0:20:57.19:0,57,796	0/0:15,0:15:45.12:0,45,605	0/0:8,0:8:21.07:0,21,294	0/0:13,0:13:39.13:0,39,546	1/1:4,7:9:26.80:239,27,0	0/0:14,0:14:39.13:0,39,543
chr10	104770273	.	T	TTCCAATA	8274.77	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.760;DP=634;FS=5.785;HRun=0;HaplotypeScore=166.0303;InbreedingCoeff=0.9985;MQ=84.16;MQ0=0;MQRankSum=-13.731;QD=75.23;ReadPosRankSum=-4.041;VQSLOD=4.1492;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,99,2501	1/1:3,6:9:24.07:889,24,0	0/0:24,0:24:69.20:0,69,1524	0/0:19,0:18:35.95:0,36,809	0/0:23,0:23:60.19:0,60,1460	0/0:24,0:24:66.18:0,66,1582	0/0:19,0:19:51.17:0,51,1225	1/1:21,9:30:72.17:2518,72,0	0/0:25,0:25:72.23:0,72,1764	0/0:29,0:29:84.28:0,84,2100	0/0:14,0:14:36.12:0,36,889	0/0:21,0:21:60.21:0,60,1539	0/0:25,0:25:72.20:0,72,1747	0/0:26,0:26:75.24:0,75,1871	0/0:23,0:23:69.24:0,69,1770	0/0:34,0:34:96.33:0,96,2407	0/0:33,0:33:93.26:0,93,2190	0/0:19,0:19:54.14:0,54,1299	1/1:13,5:19:30.10:1111,30,0	1/1:10,8:19:45.15:1725,45,0	1/1:7,8:17:21.07:785,21,0	0/0:27,0:27:78.25:0,78,1864	0/0:17,0:17:42.13:0,42,995	0/0:18,0:18:51.16:0,51,1191	0/0:17,0:16:48.16:0,48,1154	0/0:33,0:33:87.29:0,87,2138	1/1:5,10:16:33.10:1247,33,0	0/0:12,0:12:36.12:0,36,907
chr10	104770509	.	C	CTA	7598.11	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=17.457;DP=744;FS=1.534;HRun=0;HaplotypeScore=109.2574;InbreedingCoeff=0.9998;MQ=88.61;MQ0=0;MQRankSum=-11.178;QD=44.96;ReadPosRankSum=-0.448;VQSLOD=5.6298;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,162,2411	1/1:1,10:11:30.10:574,30,0	0/0:35,0:35:93.21:0,93,1342	0/0:24,0:24:66.21:0,66,967	0/0:24,0:24:72.20:0,72,1032	0/0:21,0:21:63.18:0,63,921	0/0:26,0:26:75.23:0,75,1104	1/1:12,25:37:99:1832,102,0	0/0:30,0:30:90.29:0,90,1356	0/0:25,0:25:72.23:0,72,1064	0/0:20,0:20:57.16:0,57,827	0/0:20,0:20:60.18:0,60,877	0/0:27,0:27:81.26:0,81,1218	0/0:19,0:19:51.16:0,51,756	0/0:20,0:20:60.20:0,60,917	0/0:29,0:29:87.25:0,87,1267	0/0:43,0:43:99:0,129,1903	0/0:30,0:30:87.27:0,87,1304	1/1:10,14:24:66.11:1160,66,0	1/1:5,19:24:57.20:1093,57,0	1/1:4,38:43:78.26:1498,78,0	0/0:20,0:20:60.19:0,60,899	0/0:21,0:21:57.19:0,57,873	0/0:31,0:31:93.27:0,93,1377	0/0:20,0:20:57.16:0,57,829	0/0:25,0:25:75.25:0,75,1130	1/1:5,25:30:75.26:1441,75,0	0/0:10,0:10:30.10:0,30,459
chr10	104770942	.	G	GTC	8866.23	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-0.143;DP=632;FS=2.926;HRun=0;HaplotypeScore=86.4784;InbreedingCoeff=0.9924;MQ=73.80;MQ0=2;MQRankSum=-3.888;QD=42.02;ReadPosRankSum=-3.059;VQSLOD=5.6638;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,1533	1/1:1,5:6:12.04:216,12,0	0/0:16,0:16:42.12:0,42,566	0/0:16,0:16:42.12:0,42,566	0/0:16,0:16:45.13:0,45,610	1/1:1,19:20:57.20:1026,57,0	1/1:2,25:28:57.20:1026,57,0	1/1:3,29:32:87.28:1489,87,0	0/0:24,0:24:72.22:0,72,987	0/0:23,0:23:63.20:0,63,862	0/0:17,0:17:51.13:0,51,691	0/0:19,0:19:57.09:0,57,753	0/0:24,0:24:72.24:0,72,1003	0/0:24,0:24:72.23:0,72,990	0/0:20,0:20:54.16:0,54,738	0/0:23,0:23:66.22:0,66,923	0/0:44,0:44:99:0,126,1726	0/0:21,0:21:63.20:0,63,865	1/1:1,11:12:27.03:422,27,0	1/1:5,14:19:42.13:725,42,0	1/1:4,50:55:99:2183,123,0	0/0:21,0:21:60.20:0,60,840	0/0:10,0:10:30.10:0,30,418	0/0:29,0:29:87.29:0,87,1217	1/1:1,18:19:51.17:918,51,0	0/0:29,0:29:81.26:0,81,1119	1/1:2,17:18:48.16:861,48,0	0/0:5,0:5:15.05:0,15,210
chr10	104771062	.	GC	G	3992.97	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.689;DP=517;FS=16.398;HRun=4;HaplotypeScore=57.8410;InbreedingCoeff=0.9904;MQ=74.07;MQ0=0;MQRankSum=0.140;QD=32.20;ReadPosRankSum=-1.230;VQSLOD=1.7802;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.27:0,87,1188	0/0:10,0:10:27.07:0,27,343	0/0:19,0:19:39.36:0,39,481	0/0:21,1:20:11.96:0,12,437	0/0:13,0:13:36.09:0,36,467	0/0:15,0:15:45.15:0,45,630	0/0:14,0:14:36.12:0,36,503	1/1:1,29:30:84.21:992,84,0	0/0:16,0:16:48.14:0,48,653	0/0:18,0:18:54.18:0,54,756	0/0:14,0:14:36.12:0,36,504	0/0:16,0:16:48.16:0,48,672	0/0:11,0:11:33.11:0,33,462	0/0:17,0:17:48.16:0,48,672	0/0:7,0:7:21.07:0,21,294	0/0:13,0:13:39.12:0,39,530	0/0:33,0:32:96.32:0,96,1338	0/0:22,0:22:66.22:0,66,924	1/1:0,18:18:54.14:625,54,0	1/1:2,18:20:45.14:540,45,0	1/1:2,23:25:69.21:828,69,0	0/0:18,0:18:51.17:0,51,712	0/0:20,0:20:60.20:0,60,839	0/0:17,0:17:51.15:0,51,695	0/0:19,0:19:57.19:0,57,798	0/0:20,0:20:54.18:0,54,756	1/1:0,31:31:84.26:1008,84,0	0/0:8,0:8:21.07:0,21,294
chr10	104771243	.	TC	T	3528.31	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.396;DP=582;FS=2.313;HRun=6;HaplotypeScore=60.4005;InbreedingCoeff=0.9844;MQ=71.74;MQ0=1;MQRankSum=0.664;QD=28.23;ReadPosRankSum=-1.340;VQSLOD=3.7780;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:84.25:0,84,1088	1/1:1,3:4:9.02:97,9,0	0/0:23,0:23:57.31:0,57,780	0/0:25,0:23:50.59:0,51,599	0/0:18,0:18:51.15:0,51,656	0/0:12,0:12:36.12:0,36,474	0/0:30,0:30:84.26:0,84,1081	1/1:4,27:31:81.16:853,81,0	0/0:24,0:24:69.18:0,69,864	0/0:10,0:10:30.09:0,30,382	0/0:16,0:16:48.16:0,48,631	0/0:21,0:21:63.18:0,63,801	0/0:23,0:23:69.22:0,69,908	0/0:16,0:16:42.14:0,42,553	0/0:16,0:16:42.14:0,42,552	0/0:16,0:16:45.15:0,45,592	0/0:46,0:46:99:0,126,1627	0/0:26,0:26:72.21:0,72,930	1/1:3,10:13:30.07:322,30,0	1/1:1,13:14:39.10:419,39,0	1/1:2,30:32:81.20:870,81,0	0/0:16,0:16:45.14:0,45,583	0/0:9,0:9:27.09:0,27,355	0/0:31,0:31:90.28:0,90,1170	0/0:17,0:17:45.15:0,45,592	0/0:23,0:23:66.20:0,66,854	1/1:1,30:31:90.23:967,90,0	0/0:6,0:6:15.03:0,15,181
chr10	104772066	.	TAA	T	2736.99	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.910;DP=591;FS=6.708;HRun=10;HaplotypeScore=73.2660;InbreedingCoeff=0.9962;MQ=75.34;MQ0=1;MQRankSum=-1.241;QD=27.10;ReadPosRankSum=0.546;VQSLOD=3.5471;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:92.89:0,93,1425	0/0:1,0:8:17.47:0,17,60	0/0:17,0:16:20.79:0,21,511	0/0:17,0:17:29.04:0,29,389	0/0:20,0:21:53.66:0,54,797	0/0:24,0:25:74.72:0,75,1111	0/0:21,0:21:60.18:0,60,909	1/1:4,20:24:60.11:649,60,0	0/0:20,0:21:54.17:0,54,814	0/0:26,0:26:72.23:0,72,1098	0/0:19,0:19:57.19:0,57,905	0/0:20,0:20:57.17:0,57,859	0/0:21,0:21:51.17:0,51,787	0/0:17,0:18:45.05:0,45,615	0/0:14,0:14:36.12:0,36,572	0/0:21,0:21:57.19:0,57,905	0/0:36,0:36:92.76:0,93,1402	0/0:25,0:26:68.72:0,69,1053	1/1:3,22:25:66.15:725,66,0	1/1:1,16:17:45.11:502,45,0	1/1:1,15:16:42.11:468,42,0	0/0:30,0:30:81.28:0,81,1278	0/0:21,0:21:60.20:0,60,952	0/0:12,0:12:27.09:0,27,424	0/0:23,0:24:69.22:0,69,1042	0/0:25,0:26:68.71:0,69,1037	1/1:2,17:19:51.13:569,51,0	0/0:11,0:11:27.09:0,27,427
chr10	104772432	.	C	CTG	6764.61	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-9.114;DP=747;FS=21.202;HRun=0;HaplotypeScore=95.8191;InbreedingCoeff=0.9999;MQ=80.56;MQ0=0;MQRankSum=-0.511;QD=44.50;ReadPosRankSum=-1.479;VQSLOD=3.7288;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,150,2183	0/0:12,0:12:36.11:0,36,511	0/0:25,0:25:66.20:0,66,903	0/0:24,0:23:64.46:0,64,906	0/0:26,0:26:78.23:0,78,1100	0/0:19,0:19:54.15:0,54,755	0/0:32,0:32:96.31:0,96,1393	1/1:7,25:31:75.17:1225,75,0	0/0:21,0:21:63.21:0,63,927	0/0:29,0:29:81.26:0,81,1174	0/0:19,0:19:51.17:0,51,751	0/0:45,0:45:99:0,129,1859	0/0:29,0:29:87.26:0,87,1241	0/0:22,0:22:63.17:0,63,885	0/0:25,0:25:69.23:0,69,1011	0/0:17,0:17:45.14:0,45,643	0/0:41,0:41:99:0,114,1597	0/0:25,0:25:67.45:0,67,953	1/1:2,18:21:63.16:1051,63,0	1/1:2,21:23:57.20:1063,57,0	1/1:5,57:62:99:2808,150,0	0/0:24,0:24:69.23:0,69,1014	0/0:15,0:15:42.12:0,42,598	0/0:28,0:27:81.26:0,81,1171	0/0:22,0:22:66.21:0,66,950	0/0:24,0:24:69.22:0,69,999	1/1:1,13:14:33.11:618,33,0	0/0:16,0:16:48.16:0,48,706
chr10	104772483	.	G	GT	975.04	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.332;DP=548;FS=3.943;HRun=1;HaplotypeScore=74.6956;InbreedingCoeff=0.9788;MQ=96.03;MQ0=0;MQRankSum=-2.466;QD=8.41;ReadPosRankSum=-2.790;VQSLOD=0.0819;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1380	1/1:4,0:4:10.31:42,10,0	0/0:33,0:33:99:0,99,1341	0/0:22,0:22:63.21:0,63,861	0/0:12,0:12:30.08:0,30,399	0/0:12,0:12:36.12:0,36,503	0/0:26,0:26:72.24:0,72,985	1/1:28,2:30:66.99:348,67,0	0/0:17,0:17:51.17:0,51,713	0/0:20,0:20:54.18:0,54,748	0/0:12,0:12:33.11:0,33,461	0/0:25,0:25:69.21:0,69,945	0/0:17,0:17:48.14:0,48,639	0/0:17,0:17:51.17:0,51,710	0/0:25,0:25:72.21:0,72,970	0/0:16,0:16:45.14:0,45,612	0/0:30,0:30:90.30:0,90,1254	0/0:24,0:24:72.21:0,72,968	1/1:19,1:20:40.65:211,41,0	1/1:9,0:9:10.20:58,10,0	1/1:43,2:45:79.50:433,80,0	0/0:14,0:13:39.13:0,39,545	0/0:14,0:14:36.10:0,36,484	0/0:30,0:30:72.24:0,72,1007	0/0:10,0:10:24.06:0,24,317	0/0:12,0:12:33.10:0,33,445	1/1:8,0:8:17.43:65,17,0	0/0:10,0:10:30.10:0,30,419
chr10	104775212	.	T	TC	5614.51	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-3.373;DP=681;FS=1.588;HRun=1;HaplotypeScore=67.1439;InbreedingCoeff=0.9992;MQ=84.83;MQ0=0;MQRankSum=-3.191;QD=41.59;ReadPosRankSum=-2.159;VQSLOD=4.5835;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1306	1/1:1,7:8:21.07:313,21,0	0/0:18,0:18:51.15:0,51,641	0/0:24,0:24:45.45:0,45,571	0/0:38,0:38:99:0,111,1397	0/0:24,0:24:66.21:0,66,852	0/0:18,0:18:51.17:0,51,662	1/1:1,33:34:99:1403,99,0	0/0:25,0:25:75.24:0,75,973	0/0:32,0:32:96.30:0,96,1225	0/0:19,0:19:57.16:0,57,712	0/0:27,0:27:75.20:0,75,919	0/0:21,0:21:63.20:0,63,818	0/0:15,0:15:45.15:0,45,584	0/0:21,0:21:60.18:0,60,764	0/0:28,0:28:81.26:0,81,1051	0/0:25,0:25:69.21:0,69,880	0/0:27,0:27:78.17:0,78,949	1/1:0,21:21:63.18:903,63,0	1/1:0,21:21:60.20:897,60,0	1/1:2,29:31:84.28:1245,84,0	0/0:32,0:32:93.29:0,93,1188	0/0:28,0:28:81.23:0,81,1011	0/0:19,0:19:57.17:0,57,725	0/0:23,0:23:69.22:0,69,895	0/0:27,0:27:81.26:0,81,1040	1/1:0,20:20:57.19:853,57,0	0/0:19,0:19:53.91:0,54,674
chr10	104775254	.	AG	A	368.52	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.765;DP=696;FS=1.075;HRun=2;HaplotypeScore=84.6926;InbreedingCoeff=0.9998;MQ=78.39;MQ0=0;MQRankSum=-2.195;QD=28.35;ReadPosRankSum=-1.493;VQSLOD=2.8574;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1657	1/1:0,13:13:36.12:463,36,0	0/0:17,0:17:51.16:0,51,705	0/0:25,0:25:45.17:0,45,827	0/0:27,0:27:81.27:0,81,1208	0/0:23,0:23:69.23:0,69,1032	0/0:16,0:16:48.16:0,48,719	0/0:51,0:51:99:0,144,2157	0/0:30,0:30:87.28:0,87,1279	0/0:27,0:27:81.27:0,81,1213	0/0:15,0:15:39.13:0,39,584	0/0:21,0:21:63.19:0,63,903	0/0:20,0:20:57.19:0,57,852	0/0:22,0:22:63.21:0,63,943	0/0:24,0:24:72.24:0,72,1079	0/0:31,0:31:93.31:0,93,1384	0/0:29,0:29:84.28:0,84,1253	0/0:29,0:29:87.29:0,87,1301	0/0:19,0:19:51.17:0,51,762	0/0:24,0:24:69.19:0,69,1008	0/0:31,0:31:90.30:0,90,1349	0/0:23,0:23:69.22:0,69,1013	0/0:20,0:20:57.18:0,57,834	0/0:32,0:32:93.31:0,93,1383	0/0:23,0:23:63.17:0,63,902	0/0:29,0:29:87.29:0,87,1302	0/0:20,0:20:54.15:0,54,766	0/0:17,0:17:51.17:0,51,764
chr10	104775443	.	GTAAA	G	6008.46	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.192;DP=547;FS=2.308;HRun=0;HaplotypeScore=101.5917;InbreedingCoeff=0.9490;MQ=70.92;MQ0=0;MQRankSum=-7.117;QD=52.71;ReadPosRankSum=-1.992;VQSLOD=5.2157;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,151,4263	1/1:0,6:6:17.95:321,18,0	0/0:6,0:6:8.61:0,9,337	0/0:16,0:16:33.24:0,33,686	0/0:25,0:25:75.26:0,75,2101	1/1:0,13:13:36.12:754,36,0	1/1:0,23:23:66.16:1338,66,0	1/1:0,9:9:27.09:544,27,0	0/0:24,0:24:66.23:0,66,1838	0/0:27,0:27:81.28:0,81,2347	0/0:13,0:13:39.13:0,39,1107	0/0:21,0:21:63.22:0,63,1754	0/0:20,0:20:60.19:0,60,1645	0/0:19,0:19:57.20:0,57,1639	0/0:30,0:30:90.31:0,90,2494	0/0:20,0:20:60.21:0,60,1665	0/0:33,0:33:99:0,99,2775	0/0:29,0:29:87.30:0,87,2407	1/1:0,13:13:39.09:739,39,0	1/1:0,13:11:32.99:601,33,0	1/1:0,11:11:21:375,21,0	0/0:26,0:26:78.27:0,78,2184	0/0:19,0:18:54.15:0,54,1455	0/0:18,0:18:54.19:0,54,1498	1/1:0,10:10:30.03:583,30,0	0/0:20,1:21:0.29:0,0,1662	1/1:0,16:16:36.12:753,36,0	0/0:16,0:16:48.16:0,48,1389
chr10	104775581	.	TGAGCTAGACGCAA	T	4746.54	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.888;DP=569;FS=24.857;HRun=0;HaplotypeScore=205.4431;InbreedingCoeff=0.9954;MQ=90.86;MQ0=0;MQRankSum=-9.271;QD=70.84;ReadPosRankSum=-0.476;VQSLOD=2.8030;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,6613	0/0:9,0:9:27.09:0,27,1610	0/0:25,0:25:72.25:0,72,3386	0/0:26,0:26:78.24:0,78,4111	0/0:11,0:11:30.10:0,30,1698	0/0:19,0:19:45.15:0,45,2851	0/0:22,0:22:63.19:0,63,3837	1/1:3,8:11:24.03:708,24,0	0/0:21,0:21:60.21:0,60,3938	0/0:26,0:26:78.27:0,78,4956	0/0:8,0:8:21.07:0,21,1384	0/0:23,0:23:69.24:0,69,4370	0/0:17,0:17:51.18:0,51,3268	0/0:28,0:28:84.29:0,84,5169	0/0:22,0:22:66.23:0,66,4335	0/0:19,0:19:57.20:0,57,3193	0/0:46,0:46:99:0,135,8751	0/0:36,0:36:99:0,105,6821	1/1:5,8:13:24.08:961,24,0	1/1:2,11:13:27.09:1021,27,0	1/1:4,13:17:21.07:830,21,0	0/0:14,0:14:39.12:0,39,2321	0/0:10,0:10:30.10:0,30,1799	0/0:43,0:43:99:0,129,8114	0/0:18,0:18:54.14:0,54,3255	0/0:17,0:17:45.15:0,45,2649	1/1:1,12:13:30.10:1228,30,0	0/0:7,0:7:21.07:0,21,1405
chr10	104776327	.	TCTC	T	125.49	PASS	AB=1.000;AC=10;AF=0.185;AN=54;BaseQRankSum=4.576;DP=127;FS=5.462;HRun=0;HaplotypeScore=34.7965;InbreedingCoeff=0.3823;MQ=65.92;MQ0=2;MQRankSum=-3.435;QD=3.06;ReadPosRankSum=-0.822;VQSLOD=0.7081;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:24.06:0,24,518	0/1:5,0:5:6.30:30,0,6	0/0:6,0:2:6.01:0,6,64	0/0:13,0:9:21.07:0,21,428	0/0:4,0:4:9.03:0,9,201	0/0:1,0:1:3.01:0,3,46	0/0:1,0:1:2.84:0,3,14	1/1:9,0:9:7:92,7,0	0/0:8,0:8:24.08:0,24,579	0/0:4,0:4:12.04:0,12,235	./.	0/0:1,0:1:3.01:0,3,74	0/0:1,0:1:2.99:0,3,23	0/0:2,0:2:6.02:0,6,137	0/0:3,0:2:6.02:0,6,148	0/0:1,0:1:3.01:0,3,74	0/0:2,0:2:6.02:0,6,108	0/0:4,0:3:9.03:0,9,208	0/1:9,0:8:16.53:22,0,17	1/1:3,0:3:5.01:27,5,0	1/1:9,3:12:8.09:79,8,0	0/0:4,0:4:12.04:0,12,266	0/0:3,0:3:6.02:0,6,130	0/0:5,0:5:12.04:0,12,274	0/0:2,0:2:5.75:0,6,50	0/0:9,0:9:27.08:0,27,566	1/1:2,1:3:3.14:9,3,0	0/0:4,0:4:12.01:0,12,197
chr10	104777191	.	T	TTC	1450.65	PASS	AB=0.700;AC=7;AF=0.130;AN=54;BaseQRankSum=6.294;DP=354;FS=8.915;HRun=0;HaplotypeScore=82.7702;InbreedingCoeff=0.7044;MQ=82.79;MQ0=8;MQRankSum=-6.418;QD=25.01;ReadPosRankSum=-0.028;VQSLOD=4.1109;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:33.11:0,33,453	0/0:2,0:2:6.02:0,6,82	0/0:36,0:23:44.91:0,45,524	0/0:50,0:29:28.27:0,28,578	0/0:8,0:7:21.07:0,21,289	0/0:8,0:8:24.08:0,24,329	0/0:16,0:16:15.34:0,15,455	1/1:8,9:16:23.06:560,23,0	0/0:11,0:11:33.11:0,33,446	0/0:13,0:13:39.12:0,39,512	0/0:8,0:8:21.07:0,21,288	0/0:12,0:12:36.12:0,36,494	0/0:8,0:8:24.08:0,24,330	0/0:5,0:5:15.05:0,15,206	0/0:5,0:4:12.04:0,12,164	0/0:9,0:9:27.08:0,27,354	0/0:11,0:11:29.22:0,29,394	0/0:21,0:21:56.92:0,57,752	0/1:12,9:17:77.37:358,0,77	1/1:3,4:7:5.55:203,6,0	0/0:1,0:1:1.55:0,2,4	0/0:7,0:7:18.06:0,18,247	0/0:9,0:9:24.04:0,24,308	0/0:19,0:19:51.15:0,51,670	0/0:10,0:9:24.08:0,24,330	0/0:13,0:13:36.12:0,36,495	1/1:4,9:13:12.72:466,13,0	./.
chr10	104777210	.	CT	C	324.52	PASS	AB=0.933;AC=9;AF=0.167;AN=54;BaseQRankSum=9.182;DP=396;FS=6.411;HRun=4;HaplotypeScore=74.9068;InbreedingCoeff=0.7510;MQ=74.15;MQ0=11;MQRankSum=-7.928;QD=7.05;ReadPosRankSum=0.190;VQSLOD=-0.1657;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.17:0,51,711	./.	0/0:38,0:20:52.19:0,52,605	0/0:53,1:28:32.54:0,33,550	0/0:12,0:11:33.10:0,33,456	0/0:9,0:9:27.09:0,27,388	0/0:19,0:19:54.18:0,54,777	1/1:13,1:13:8.62:58,9,0	0/0:11,0:11:33.11:0,33,474	0/0:17,0:17:48.16:0,48,691	0/0:9,0:9:27.07:0,27,352	0/0:11,0:11:33.11:0,33,467	0/0:10,0:10:30.10:0,30,432	0/0:9,0:9:27.09:0,27,388	0/0:7,0:6:18.06:0,18,259	0/0:10,0:10:30.10:0,30,432	0/0:18,0:18:54.17:0,54,759	0/0:24,0:24:65.23:0,65,943	0/1:13,1:13:20.61:102,0,21	1/1:5,0:5:13.93:79,14,0	1/1:1,0:1:3:25,3,0	0/0:9,0:9:27.09:0,27,382	0/0:15,0:15:42.14:0,42,604	0/0:21,0:21:63.21:0,63,906	0/0:13,0:12:33.11:0,33,475	0/0:14,0:14:42.14:0,42,604	1/1:10,2:12:30.29:208,30,0	0/0:1,0:1:3.01:0,3,42
chr10	104777212	.	T	TC	1173.44	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=9.383;DP=405;FS=10.106;HRun=0;HaplotypeScore=74.7227;InbreedingCoeff=0.9095;MQ=71.49;MQ0=12;MQRankSum=-8.509;QD=24.97;ReadPosRankSum=-0.869;VQSLOD=3.5461;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.17:0,51,710	./.	0/0:38,0:19:54.03:0,54,630	0/0:53,0:28:45.28:0,45,517	0/0:13,0:12:33.10:0,33,446	0/0:9,0:9:27.09:0,27,377	0/0:20,0:20:54.18:0,54,755	1/1:5,10:14:24.43:285,24,0	0/0:11,0:11:33.11:0,33,461	0/0:16,0:16:48.16:0,48,671	0/0:9,0:9:27.07:0,27,359	0/0:12,0:12:33.11:0,33,451	0/0:11,0:11:30.10:0,30,420	0/0:9,0:9:27.09:0,27,377	0/0:7,0:6:18.06:0,18,252	0/0:10,0:10:30.10:0,30,420	0/0:19,0:19:57.16:0,57,760	0/0:23,0:23:67.47:0,67,926	1/1:3,10:12:20.90:421,21,0	1/1:0,5:5:15.05:215,15,0	1/1:1,1:2:3.01:30,3,0	0/0:10,0:10:27.09:0,27,377	0/0:16,0:16:45.14:0,45,612	0/0:21,0:21:63.21:0,63,881	0/0:14,0:13:33.11:0,33,461	0/0:14,0:14:42.14:0,42,587	1/1:3,9:12:32.75:385,33,0	0/0:3,0:3:3.01:0,3,42
chr10	104777215	.	T	TC	409.89	PASS	AB=0.917;AC=8;AF=0.148;AN=54;BaseQRankSum=9.386;DP=411;FS=8.249;HRun=1;HaplotypeScore=77.1029;InbreedingCoeff=0.6829;MQ=71.34;MQ0=12;MQRankSum=-7.876;QD=8.72;ReadPosRankSum=-0.691;VQSLOD=0.2997;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.12:0,48,649	./.	0/0:33,0:14:38.89:0,39,486	0/0:54,0:29:25.78:0,26,495	0/0:14,0:13:39.13:0,39,540	0/0:9,0:9:27.09:0,27,378	0/0:22,0:22:63.19:0,63,842	0/1:12,3:14:3.13:131,0,3	0/0:11,0:11:33.11:0,33,462	0/0:17,0:16:48.16:0,48,671	0/0:10,0:10:27.06:0,27,356	0/0:12,0:12:36.12:0,36,501	0/0:11,0:11:33.11:0,33,459	0/0:9,0:9:27.09:0,27,378	0/0:8,0:7:21.06:0,21,277	0/0:10,0:10:30.10:0,30,420	0/0:20,0:20:57.19:0,57,797	0/0:24,0:24:72.18:0,72,966	0/1:13,0:12:39.08:155,0,39	1/1:5,0:5:14.53:88,15,0	1/1:1,1:2:2.90:16,3,0	0/0:10,0:10:30.07:0,30,396	0/0:16,0:16:45.15:0,45,629	0/0:23,0:23:66.18:0,66,901	0/0:15,0:14:39.12:0,39,527	0/0:15,0:15:45.15:0,45,627	1/1:12,0:12:26.04:161,26,0	0/0:3,0:3:9.03:0,9,121
chr10	104777216	.	T	TC	958.32	PASS	AB=0.695;AC=8;AF=0.148;AN=54;BaseQRankSum=9.466;DP=412;FS=8.201;HRun=0;HaplotypeScore=74.5109;InbreedingCoeff=0.6920;MQ=71.42;MQ0=12;MQRankSum=-8.289;QD=20.83;ReadPosRankSum=-0.585;VQSLOD=4.8567;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.15:0,45,627	./.	0/0:32,0:14:39.05:0,39,488	0/0:52,0:28:41.13:0,41,505	0/0:14,0:13:39.13:0,39,544	0/0:9,0:9:27.09:0,27,377	0/0:22,0:22:63.19:0,63,846	0/1:11,4:14:2.27:231,0,2	0/0:11,0:11:33.11:0,33,462	0/0:18,0:17:48.16:0,48,671	0/0:10,0:10:27.06:0,27,356	0/0:12,0:12:36.12:0,36,503	0/0:12,0:12:33.11:0,33,461	0/0:9,0:9:27.09:0,27,378	0/0:8,0:7:21.06:0,21,279	0/0:10,0:10:30.10:0,30,420	0/0:21,0:21:60.18:0,60,821	0/0:24,0:24:72.19:0,72,967	0/1:4,8:11:40.84:280,0,41	1/1:0,5:5:15.05:212,15,0	1/1:1,1:2:2.90:16,3,0	0/0:10,0:10:27.09:0,27,377	0/0:17,0:17:45.15:0,45,629	0/0:23,0:23:69.17:0,69,926	0/0:15,0:14:39.12:0,39,531	0/0:15,0:15:45.15:0,45,629	1/1:3,9:12:32.01:361,32,0	0/0:3,0:3:9.03:0,9,125
chr10	104777219	.	TTA	T	815.91	PASS	AB=0.980;AC=10;AF=0.185;AN=54;BaseQRankSum=9.877;DP=411;FS=8.126;HRun=0;HaplotypeScore=81.4581;InbreedingCoeff=0.6453;MQ=68.72;MQ0=12;MQRankSum=-8.007;QD=8.68;ReadPosRankSum=-1.353;VQSLOD=2.2784;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.16:0,48,973	./.	0/0:27,0:13:36.10:0,36,647	0/1:46,2:26:62.23:62,0,592	0/0:15,0:14:42.14:0,42,833	0/0:9,0:9:27.09:0,27,548	0/0:22,0:22:63.22:0,63,1246	1/1:10,4:13:4.09:209,4,0	0/0:11,0:11:33.11:0,33,668	0/0:19,0:18:54.19:0,54,1091	0/0:11,0:11:33.11:0,33,629	0/0:12,0:12:36.12:0,36,728	0/0:12,0:12:36.11:0,36,689	0/0:9,0:9:27.09:0,27,549	0/0:8,0:7:21.07:0,21,423	0/0:10,0:10:30.09:0,30,556	0/0:22,0:22:66.23:0,66,1324	0/0:26,0:26:78.27:0,78,1575	0/1:12,0:11:31.10:192,0,31	1/1:5,0:5:14.99:158,15,0	1/1:1,1:2:3:26,3,0	0/0:9,0:9:27.09:0,27,544	0/0:18,0:18:48.16:0,48,971	0/0:25,0:25:75.25:0,75,1434	0/0:15,0:14:39.13:0,39,789	0/0:15,0:15:45.14:0,45,875	1/1:11,0:12:33.02:319,33,0	0/0:3,0:3:9.03:0,9,181
chr10	104777220	.	T	TC	290.44	PASS	AB=0.833;AC=8;AF=0.148;AN=54;BaseQRankSum=7.742;DP=401;FS=0.000;HRun=0;HaplotypeScore=67.4167;InbreedingCoeff=0.6480;MQ=68.45;MQ0=11;MQRankSum=-5.736;QD=8.30;ReadPosRankSum=1.030;VQSLOD=3.5068;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.16:0,48,670	./.	0/0:26,0:13:35.77:0,36,443	0/0:45,0:26:30.76:0,31,409	0/0:15,0:14:42.13:0,42,570	0/0:9,0:9:27.09:0,27,377	0/0:22,0:22:63.19:0,63,847	0/1:10,0:9:5.30:50,0,5	0/0:11,0:11:33.11:0,33,460	0/0:19,0:18:54.17:0,54,741	0/0:11,0:11:33.10:0,33,431	0/0:12,0:12:36.12:0,36,501	0/0:11,0:11:33.11:0,33,459	0/0:9,0:9:27.09:0,27,378	0/0:8,0:7:21.07:0,21,294	0/0:10,0:10:27.09:0,27,376	0/0:23,0:23:66.21:0,66,906	0/0:26,0:26:78.26:0,78,1086	0/1:3,5:9:6.37:181,0,6	1/1:0,3:3:8.86:63,9,0	1/1:1,0:2:0.47:1,0,0	0/0:9,0:9:27.09:0,27,374	0/0:18,0:18:48.16:0,48,669	0/0:26,0:26:72.18:0,72,966	0/0:15,0:14:39.13:0,39,544	0/0:16,0:16:45.15:0,45,619	1/1:3,4:10:10.02:121,10,0	0/0:3,0:3:9.03:0,9,126
chr10	104777224	.	T	TC	976.26	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.130;DP=416;FS=5.474;HRun=0;HaplotypeScore=70.2580;InbreedingCoeff=0.9017;MQ=66.36;MQ0=11;MQRankSum=-7.710;QD=20.34;ReadPosRankSum=-2.555;VQSLOD=4.5951;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.17:0,51,713	0/0:1,0:1:2.98:0,3,22	0/0:27,0:15:36.08:0,36,442	0/0:47,0:25:7.98:0,8,423	0/0:15,0:14:42.14:0,42,587	0/0:9,0:9:27.09:0,27,378	0/0:23,0:23:66.18:0,66,885	1/1:14,3:16:32.98:351,33,0	0/0:12,0:12:36.11:0,36,486	0/0:20,0:19:54.17:0,54,729	0/0:12,0:12:36.11:0,36,489	0/0:11,0:11:33.10:0,33,446	0/0:10,0:10:30.09:0,30,403	0/0:9,0:9:27.09:0,27,378	0/0:8,0:7:21.07:0,21,294	0/0:9,0:9:27.08:0,27,360	0/0:23,0:23:69.23:0,69,964	0/0:27,0:27:81.24:0,81,1098	1/1:7,5:10:24.07:306,24,0	1/1:1,3:4:9.01:94,9,0	1/1:2,1:3:8.89:66,9,0	0/0:9,0:9:27.09:0,27,377	0/0:18,0:18:48.15:0,48,657	0/0:26,0:26:78.24:0,78,1063	0/0:15,0:14:39.13:0,39,545	0/0:16,0:16:48.16:0,48,671	1/1:8,4:12:32.69:327,33,0	0/0:3,0:3:9.03:0,9,126
chr10	104777228	.	T	TC	169.05	PASS	AB=0.789;AC=3;AF=0.054;AN=56;BaseQRankSum=5.712;DP=423;FS=0.000;HRun=0;HaplotypeScore=73.2459;InbreedingCoeff=-0.0624;MQ=66.13;MQ0=11;MQRankSum=-3.395;QD=5.12;ReadPosRankSum=-1.787;VQSLOD=2.5756;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.17:0,54,738	0/0:1,0:1:2.98:0,3,22	0/0:26,0:16:36.98:0,37,461	0/0:43,0:25:12.04:0,12,443	0/0:16,0:15:42.14:0,42,587	0/0:9,0:9:27.09:0,27,377	0/0:24,0:24:66.17:0,66,884	0/0:20,0:19:42.05:0,42,497	0/0:12,0:12:36.12:0,36,500	0/0:19,0:18:54.18:0,54,755	0/0:14,0:14:42.13:0,42,567	0/0:10,0:10:30.10:0,30,414	0/0:9,0:9:27.08:0,27,362	0/0:10,0:10:30.09:0,30,405	0/0:7,0:6:18.06:0,18,252	0/0:9,0:9:27.06:0,27,330	0/0:24,0:24:72.20:0,72,985	0/0:27,0:27:78.26:0,78,1091	0/1:12,2:12:89.55:90,0,219	0/1:3,2:5:20.43:61,0,20	0/0:3,0:3:8.99:0,9,96	0/0:9,0:9:27.09:0,27,377	0/0:18,0:18:48.16:0,48,668	0/0:23,0:23:69.23:0,69,965	0/0:16,0:15:42.10:0,42,565	0/0:17,0:17:51.17:0,51,710	0/1:10,4:14:99:118,0,219	0/0:4,0:4:9.03:0,9,126
chr10	104777407	.	CT	C	692.66	PASS	AB=0.944;AC=10;AF=0.179;AN=56;BaseQRankSum=1.867;DP=500;FS=1.838;HRun=14;HaplotypeScore=66.9707;InbreedingCoeff=0.6968;MQ=63.85;MQ0=1;MQRankSum=0.138;QD=7.70;ReadPosRankSum=2.857;VQSLOD=2.9106;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,3:43:67.66:0,68,772	1/1:2,8:11:25.79:170,26,0	0/0:10,0:5:8.28:0,8,40	0/1:15,0:14:8.55:9,0,46	0/0:8,0:8:21.02:0,21,195	1/1:3,13:16:26.78:185,27,0	1/1:9,15:25:39.72:258,40,0	0/0:17,0:32:55.88:0,56,278	0/0:15,0:14:24:0,24,216	0/0:10,0:12:23.71:0,24,190	0/0:9,0:9:27.03:0,27,251	0/0:11,0:11:20.98:0,21,186	0/0:21,1:22:27.42:0,27,372	0/0:19,0:19:45.01:0,45,404	0/0:10,1:11:0.42:0,0,139	0/0:19,0:20:36:0,36,319	0/0:25,1:27:6.98:0,7,298	0/0:29,2:31:51.39:0,51,591	0/0:13,0:19:22.47:0,22,109	0/0:4,0:19:22.98:0,23,123	0/0:5,0:17:12.17:0,12,77	0/0:9,0:11:22.57:0,23,182	0/1:7,1:8:2.56:3,0,121	0/0:21,3:24:12.88:0,13,395	1/1:1,11:13:34.74:230,35,0	0/0:16,1:18:8.68:0,9,241	0/0:3,0:17:14.32:0,14,76	0/0:13,0:13:35.95:0,36,307
chr10	104777565	.	CTTTTT	C	1429.63	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=3.445;DP=516;FS=4.154;HRun=16;HaplotypeScore=103.0213;InbreedingCoeff=0.7952;MQ=64.11;MQ0=4;MQRankSum=-2.866;QD=19.32;ReadPosRankSum=4.922;VQSLOD=1.1478;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:46:99:0,102,2282	0/0:1,0:4:9.03:0,9,186	0/0:17,0:9:18.02:0,18,234	0/1:19,0:15:11.53:12,0,318	0/0:17,0:17:42.11:0,42,832	1/1:4,15:19:39.06:607,39,0	1/1:4,15:18:19.40:532,19,0	0/0:15,0:27:58.03:0,58,1022	0/0:14,0:17:36.06:0,36,697	0/0:18,0:19:51.17:0,51,1117	0/0:9,0:12:30.09:0,30,633	0/0:15,0:17:33.11:0,33,742	0/0:13,0:14:36.08:0,36,794	0/0:12,0:12:24.07:0,24,484	0/0:15,0:19:39.13:0,39,827	0/0:13,0:15:33.06:0,33,628	0/0:29,0:32:54.19:0,54,1246	0/0:20,0:23:48.16:0,48,1023	0/0:26,0:26:45.03:0,45,867	0/0:15,0:14:27.09:0,27,531	0/0:3,0:3:6:0,6,91	0/0:13,0:14:33.04:0,33,634	0/0:18,0:21:42.98:0,43,785	0/0:18,0:23:42.08:0,42,797	1/1:2,13:15:28.84:426,29,0	0/0:13,0:14:24.07:0,24,454	0/0:20,0:20:42.12:0,42,805	0/0:9,0:7:21.07:0,21,506
chr10	104777800	.	T	TC	3083.66	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.871;DP=549;FS=1.364;HRun=0;HaplotypeScore=78.2103;InbreedingCoeff=0.9971;MQ=78.56;MQ0=0;MQRankSum=-2.662;QD=30.53;ReadPosRankSum=-1.180;VQSLOD=3.0159;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1580	0/0:10,0:10:30.10:0,30,419	0/0:8,0:8:17.22:0,17,250	0/0:21,0:21:40.91:0,41,485	0/0:32,0:32:93.28:0,93,1252	0/0:19,0:19:57.19:0,57,797	0/0:14,0:14:42.14:0,42,587	1/1:3,25:28:81.71:992,82,0	0/0:22,0:22:66.22:0,66,917	0/0:18,0:18:54.18:0,54,753	0/0:11,0:11:30.10:0,30,419	0/0:22,0:22:57.18:0,57,782	0/0:17,0:17:48.15:0,48,654	0/0:18,0:18:54.16:0,54,737	0/0:20,0:20:54.16:0,54,724	0/0:16,0:16:45.15:0,45,629	0/0:25,0:25:66.17:0,66,881	0/0:13,0:13:39.10:0,39,525	1/1:0,10:10:29.99:287,30,0	1/1:4,16:20:49.24:594,49,0	1/1:4,11:15:36.82:427,37,0	0/0:20,0:20:60.20:0,60,838	0/0:18,0:18:51.17:0,51,711	0/0:23,0:22:69.22:0,69,947	0/0:26,0:26:78.26:0,78,1090	0/0:27,0:27:75.24:0,75,1034	1/1:1,27:28:78.24:959,78,0	0/0:9,0:9:27.09:0,27,377
chr10	104778109	.	C	CT	2353.39	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-3.402;DP=447;FS=0.000;HRun=9;HaplotypeScore=48.3890;InbreedingCoeff=0.9837;MQ=70.07;MQ0=0;MQRankSum=-0.584;QD=22.63;ReadPosRankSum=-3.374;VQSLOD=2.8435;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:53.96:0,54,469	0/0:8,0:8:17.99:0,18,156	0/0:10,0:10:23.88:0,24,203	0/0:12,0:11:23.99:0,24,206	0/0:20,0:20:53.98:0,54,469	0/0:22,0:22:56.98:0,57,495	0/0:11,0:11:32.99:0,33,286	1/1:5,24:29:72.67:798,73,0	0/0:15,0:15:41.99:0,42,365	0/0:8,0:8:18:0,18,156	0/0:8,0:8:17.98:0,18,153	0/0:8,0:8:23.98:0,24,205	0/0:18,0:18:41.97:0,42,365	0/0:11,0:11:29.99:0,30,260	0/0:15,0:15:38.99:0,39,339	0/0:18,0:18:53.99:0,54,469	0/0:17,0:17:44.99:0,45,391	0/0:24,0:24:53.98:0,54,469	1/1:3,19:22:57.14:622,57,0	1/1:5,12:17:36.06:385,36,0	1/1:3,6:9:12.03:133,12,0	0/0:10,0:10:23.99:0,24,208	0/0:13,0:13:38.98:0,39,335	0/0:15,0:15:38.97:0,39,334	0/0:15,0:15:41.95:0,42,356	0/0:29,0:29:86.98:0,87,755	1/1:8,17:27:56.82:590,57,0	0/0:8,0:9:20.02:0,20,162
chr10	104778383	.	CG	C	638.27	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=6.250;DP=223;FS=8.373;HRun=1;HaplotypeScore=38.1325;InbreedingCoeff=0.5486;MQ=87.39;MQ0=1;MQRankSum=-3.426;QD=11.60;ReadPosRankSum=-1.422;VQSLOD=0.6706;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:37.17:0,37,373	1/1:3,3:6:12.02:114,12,0	0/0:36,2:15:19.03:0,19,168	0/0:33,1:16:6.47:0,6,92	0/1:4,0:4:3.62:4,0,19	0/0:6,0:6:12:0,12,129	0/0:5,0:4:12:0,12,110	1/1:10,0:10:26.03:215,26,0	0/0:3,0:3:8.99:0,9,75	0/0:1,0:1:1.55:0,2,4	0/0:3,0:3:9.01:0,9,94	0/1:5,0:5:11.63:12,0,59	0/0:2,0:2:3.01:0,3,35	0/0:5,0:5:11.53:0,12,103	0/0:6,0:6:13.50:0,14,160	0/0:7,0:7:12.62:0,13,164	0/0:11,0:11:23.12:0,23,251	0/0:9,0:9:2.03:0,2,121	1/1:6,0:6:7.41:40,7,0	1/1:5,3:8:21.16:177,21,0	1/1:2,1:3:3:28,3,0	0/1:3,0:3:9.49:9,0,11	0/0:1,0:1:2.68:0,3,11	0/0:6,0:6:14.89:0,15,146	0/0:7,0:7:10.51:0,11,89	0/0:6,0:6:14.92:0,15,130	1/1:5,5:10:25.21:211,25,0	0/0:4,0:4:11.99:0,12,118
chr10	104778389	.	CCCCCCG	C	534.78	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=5.101;DP=223;FS=2.078;HRun=0;HaplotypeScore=55.7902;InbreedingCoeff=0.5879;MQ=86.08;MQ0=1;MQRankSum=-3.504;QD=10.28;ReadPosRankSum=0.607;VQSLOD=1.9185;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:30.07:0,30,769	1/1:5,3:8:9.50:143,10,0	0/0:39,0:15:29.73:0,30,446	0/0:36,0:18:7.46:0,7,166	0/0:5,0:5:5.84:0,6,96	0/0:5,0:5:9.03:0,9,291	0/0:7,0:6:18.06:0,18,357	0/1:3,0:3:0:0,0,0	0/1:3,0:3:0:0,0,0	0/0:3,0:3:8.76:0,9,101	0/0:3,0:3:6.01:0,6,194	0/0:5,0:5:12.03:0,12,243	0/0:2,0:2:3.01:0,3,97	0/0:5,0:5:15.05:0,15,363	0/0:7,0:7:14.98:0,15,343	0/0:5,0:5:15.05:0,15,362	0/0:10,0:10:21.04:0,21,612	0/0:9,0:9:23.99:0,24,496	1/1:8,0:8:2.97:10,3,0	1/1:5,1:8:9.03:163,9,0	1/1:6,0:6:5.64:79,6,0	0/0:2,0:2:0.47:0,0,1	./.	0/0:5,0:5:15.05:0,15,407	0/0:5,0:5:6.96:0,7,182	0/0:4,0:4:4.23:0,4,27	1/1:11,1:12:20.40:275,20,0	0/1:4,0:4:9.82:10,0,279
chr10	104778390	.	CCCCCG	C	435.13	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=4.896;DP=225;FS=4.567;HRun=0;HaplotypeScore=53.6608;InbreedingCoeff=0.5810;MQ=86.45;MQ0=1;MQRankSum=-4.519;QD=4.68;ReadPosRankSum=-0.333;VQSLOD=1.1899;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:30.07:0,30,647	1/1:8,0:8:9.97:132,10,0	0/0:40,0:15:29.12:0,29,349	0/1:38,0:20:0.16:0,0,176	0/0:4,0:4:5.81:0,6,65	0/0:6,0:6:11.91:0,12,266	0/0:7,0:6:18.06:0,18,318	0/1:3,0:3:0:0,0,0	0/1:3,0:3:0:0,0,0	0/0:3,0:3:8.92:0,9,90	0/0:3,0:3:5.99:0,6,167	0/0:4,0:4:10.85:0,11,184	0/0:2,0:2:3.01:0,3,84	0/0:6,0:6:15.04:0,15,292	0/0:7,0:7:14.66:0,15,294	0/0:5,0:5:15.05:0,15,305	0/0:10,0:10:21.02:0,21,517	0/0:9,0:9:23.98:0,24,415	1/1:8,0:8:6.57:21,7,0	1/1:7,1:8:9.50:130,10,0	1/1:5,1:6:5.51:59,6,0	1/1:2,0:2:2.50:9,2,0	0/1:1,0:1:0:0,0,0	0/0:5,0:5:15.05:0,15,354	0/0:5,0:5:6.82:0,7,154	0/0:4,0:4:4.23:0,4,28	1/1:10,2:12:20.25:228,20,0	0/1:4,0:4:9.85:10,0,239
chr10	104779280	.	A	AGC	2132.45	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.131;DP=497;FS=2.459;HRun=0;HaplotypeScore=84.9792;InbreedingCoeff=0.9979;MQ=91.75;MQ0=0;MQRankSum=-11.059;QD=33.32;ReadPosRankSum=-0.520;VQSLOD=5.7083;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.23:0,75,1188	0/0:8,0:8:24.08:0,24,391	0/0:26,0:26:71.87:0,72,1063	0/0:24,0:24:56.77:0,57,802	0/0:19,0:19:57.19:0,57,927	0/0:21,0:21:60.20:0,60,979	0/0:23,0:23:66.23:0,66,1071	1/1:3,10:13:36.09:473,36,0	0/0:20,0:20:57.19:0,57,930	0/0:15,0:15:45.15:0,45,734	0/0:16,0:16:48.16:0,48,782	0/0:21,0:21:63.22:0,63,1025	0/0:21,0:21:63.22:0,63,1028	0/0:15,0:15:45.15:0,45,732	0/0:16,0:16:48.15:0,48,759	0/0:21,0:21:63.20:0,63,1004	0/0:20,0:20:60.20:0,60,979	0/0:19,0:19:57.19:0,57,913	1/1:1,9:10:30.10:438,30,0	1/1:0,8:8:21.07:282,21,0	1/1:0,12:12:29.99:382,30,0	0/0:16,0:16:48.16:0,48,783	0/0:15,0:15:45.15:0,45,732	0/0:27,0:27:81.28:0,81,1320	0/0:10,0:10:30.10:0,30,488	0/0:25,0:25:72.25:0,72,1175	1/1:3,18:21:54.18:733,54,0	0/0:9,0:9:27.09:0,27,441
chr10	104779281	.	T	TCTTTTC	5057.28	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.495;DP=496;FS=1.113;HRun=0;HaplotypeScore=116.5825;InbreedingCoeff=0.9978;MQ=91.13;MQ0=0;MQRankSum=-11.724;QD=77.80;ReadPosRankSum=0.211;VQSLOD=5.6864;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.20:0,72,1733	0/0:8,0:8:24.08:0,24,615	0/0:25,0:25:72.24:0,72,1710	0/0:24,0:24:66.18:0,66,1345	0/0:19,0:19:57.18:0,57,1409	0/0:21,0:21:63.20:0,63,1533	0/0:22,0:22:66.21:0,66,1631	1/1:3,10:13:30.10:944,30,0	0/0:20,0:20:60.19:0,60,1485	0/0:15,0:15:45.15:0,45,1147	0/0:16,0:16:48.16:0,48,1230	0/0:21,0:21:63.20:0,63,1563	0/0:21,0:21:63.22:0,63,1615	0/0:16,0:16:45.15:0,45,1145	0/0:16,0:16:45.15:0,45,1154	0/0:20,0:20:60.21:0,60,1538	0/0:20,0:20:60.21:0,60,1512	0/0:19,0:19:57.13:0,57,1349	1/1:2,9:11:30.09:879,30,0	1/1:0,8:8:21.07:646,21,0	1/1:0,12:12:29.79:876,30,0	0/0:17,0:17:48.16:0,48,1198	0/0:15,0:15:45.14:0,45,1102	0/0:27,0:27:81.28:0,81,2033	0/0:10,0:10:30.10:0,30,762	0/0:25,0:25:75.25:0,75,1851	1/1:3,18:21:57.20:1712,57,0	0/0:9,0:9:27.09:0,27,692
chr10	104779473	.	C	CAA	3904.47	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.617;DP=609;FS=37.390;HRun=1;HaplotypeScore=95.2322;InbreedingCoeff=0.9889;MQ=69.26;MQ0=0;MQRankSum=-11.720;QD=42.91;ReadPosRankSum=-4.951;VQSLOD=0.6396;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.27:0,81,1238	0/0:9,0:9:27.01:0,27,336	0/0:25,0:23:60.19:0,60,871	0/0:25,0:22:47.31:0,47,689	0/0:26,0:26:75.20:0,75,1065	0/0:27,0:27:81.24:0,81,1189	0/0:19,0:19:57.18:0,57,851	1/1:5,25:30:86.98:1275,87,0	0/0:16,0:16:42.12:0,42,615	0/0:32,0:32:96.31:0,96,1425	0/0:27,0:27:81.24:0,81,1191	0/0:27,0:27:78.20:0,78,1096	0/0:18,0:18:54.10:0,54,715	0/0:20,0:20:60.16:0,60,850	0/0:14,0:14:42.10:0,42,578	0/0:32,0:32:93.30:0,93,1396	0/0:26,0:26:74.99:0,75,1123	0/0:21,0:21:60.17:0,60,874	1/1:0,6:6:18.05:313,18,0	1/1:3,25:28:75.14:1289,75,0	1/1:2,9:11:18.42:270,18,0	0/0:22,0:22:66.20:0,66,967	0/0:28,0:28:84.29:0,84,1279	0/0:33,0:33:99:0,99,1504	0/0:15,0:15:45.15:0,45,687	0/0:24,0:24:69.22:0,69,1034	1/1:5,11:16:48.01:757,48,0	0/0:4,0:4:12:0,12,134
chr10	104779508	.	A	AAAC	2765.13	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.136;DP=549;FS=55.706;HRun=0;HaplotypeScore=97.9015;InbreedingCoeff=0.9693;MQ=82.40;MQ0=0;MQRankSum=-11.050;QD=49.38;ReadPosRankSum=-0.427;VQSLOD=1.5538;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,2174	0/0:14,0:14:39.13:0,39,714	0/0:27,0:26:78.25:0,78,1367	0/0:14,0:14:33.09:0,33,545	0/0:27,0:27:78.25:0,78,1410	0/0:20,0:20:60.21:0,60,1103	0/0:18,0:18:51.17:0,51,937	1/1:3,14:17:38.32:784,38,0	0/0:14,0:14:42.14:0,42,775	0/0:28,0:28:84.29:0,84,1566	0/0:24,0:24:66.21:0,66,1172	0/0:27,0:27:81.28:0,81,1503	0/0:18,0:18:51.17:0,51,940	0/0:17,0:17:51.17:0,51,949	0/0:16,0:16:45.15:0,45,832	0/0:29,0:29:87.30:0,87,1601	0/0:24,0:24:72.22:0,72,1298	0/0:14,0:14:39.13:0,39,727	1/1:4,3:7:14.96:211,15,0	1/1:2,13:18:51.08:1047,51,0	1/1:0,3:3:6.02:146,6,0	0/0:21,0:21:60.21:0,60,1118	0/0:26,0:26:78.25:0,78,1387	0/0:27,0:27:81.28:0,81,1500	0/0:14,0:14:42.12:0,42,718	0/0:29,0:29:87.30:0,87,1614	1/1:1,9:11:33.11:746,33,0	0/0:6,0:6:18.06:0,18,336
chr10	104779671	.	G	GA	60.08	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.571;DP=507;FS=8.939;HRun=1;HaplotypeScore=68.6343;InbreedingCoeff=0.6918;MQ=85.76;MQ0=0;MQRankSum=-2.406;QD=12.02;ReadPosRankSum=-2.153;VQSLOD=0.6420;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.25:0,90,1130	1/1:0,5:4:12.01:146,12,0	0/0:24,0:24:71.97:0,72,848	0/0:23,0:23:61.75:0,62,655	0/0:17,0:17:48.16:0,48,619	0/0:22,0:22:66.20:0,66,840	0/0:25,0:25:75.19:0,75,930	0/0:6,0:6:14.80:0,15,97	0/0:24,0:24:66.19:0,66,827	0/0:25,0:25:69.21:0,69,882	0/0:14,0:14:39.12:0,39,491	0/0:31,0:31:90.26:0,90,1124	0/0:25,0:25:72.16:0,72,878	0/0:19,0:19:54.18:0,54,699	0/0:23,0:23:69.22:0,69,881	0/0:22,0:22:63.19:0,63,801	0/0:33,0:33:99:0,99,1247	0/0:11,0:11:30.07:0,30,359	0/0:7,0:7:17.77:0,18,118	0/0:3,0:3:5.90:0,6,37	0/0:20,0:20:10.33:0,10,72	0/0:17,0:17:45.01:0,45,488	0/0:10,0:10:27.07:0,27,322	0/0:26,0:26:72.23:0,72,929	0/0:13,0:13:36.04:0,36,430	0/0:22,0:22:62.76:0,63,749	0/0:2,0:2:2.43:0,2,18	0/0:6,0:6:15.05:0,15,194
chr10	104779673	.	GAT	G	817.11	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.855;DP=503;FS=0.787;HRun=0;HaplotypeScore=73.5993;InbreedingCoeff=0.9444;MQ=86.05;MQ0=0;MQRankSum=-8.090;QD=23.35;ReadPosRankSum=-1.919;VQSLOD=3.1286;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.26:0,96,1749	0/0:6,0:5:12.03:0,12,152	0/0:24,0:24:68.08:0,68,1210	0/0:22,1:23:66.14:0,66,1093	0/0:17,0:17:48.15:0,48,902	0/0:22,0:22:66.21:0,66,1260	0/0:25,0:25:75.24:0,75,1397	1/1:0,6:6:18.02:240,18,0	0/0:24,0:24:72.23:0,72,1355	0/0:23,0:23:69.24:0,69,1324	0/0:14,0:14:39.13:0,39,736	0/0:29,0:29:84.29:0,84,1630	0/0:26,0:26:71.98:0,72,1367	0/0:19,0:19:57.19:0,57,1060	0/0:23,0:23:69.24:0,69,1324	0/0:22,0:22:63.22:0,63,1206	0/0:34,0:34:99:0,102,1875	0/0:11,0:11:33.10:0,33,613	1/1:0,6:6:18.06:273,18,0	1/1:0,3:3:8.99:117,9,0	1/1:0,18:18:19.30:282,19,0	0/0:16,0:16:45.14:0,45,797	0/0:11,0:11:30.09:0,30,535	0/0:25,0:25:75.19:0,75,1359	0/0:14,0:14:39.11:0,39,687	0/0:21,0:21:63.22:0,63,1198	1/1:1,1:2:5.98:69,6,0	0/0:6,0:6:15.05:0,15,295
chr10	104779841	.	AC	A	81.52	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=3.298;DP=578;FS=15.214;HRun=1;HaplotypeScore=66.1364;InbreedingCoeff=0.8994;MQ=69.06;MQ0=0;MQRankSum=-3.545;QD=16.30;ReadPosRankSum=0.539;VQSLOD=2.3895;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,1670	1/1:0,5:5:12.04:167,12,0	0/0:29,1:30:42.13:0,42,1180	0/0:28,0:28:82.83:0,83,1275	0/0:14,0:14:36.01:0,36,535	0/0:20,0:20:57.19:0,57,909	0/0:24,0:24:66.22:0,66,1049	0/0:16,0:16:45.07:0,45,653	0/0:20,0:20:57.13:0,57,878	0/0:27,0:27:78.27:0,78,1240	0/0:20,0:20:58.06:0,58,879	0/0:29,0:29:81.21:0,81,1261	0/0:23,0:23:63.15:0,63,965	0/0:27,0:27:75.26:0,75,1193	0/0:28,0:28:84.29:0,84,1335	0/0:25,0:25:69.19:0,69,1069	0/0:33,0:33:99:0,99,1548	0/0:23,0:23:69.15:0,69,1058	0/0:4,0:3:9.03:0,9,142	./.	0/0:13,0:13:15.04:0,15,175	0/0:19,0:19:54.18:0,54,857	0/0:18,0:18:51.17:0,51,810	0/0:35,0:35:99:0,105,1675	0/0:24,0:24:69.23:0,69,1085	0/0:11,0:11:33.09:0,33,481	./.	0/0:20,0:20:60.14:0,60,905
chr10	104780021	.	CAGA	C	173.86	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=3.442;DP=605;FS=3.753;HRun=0;HaplotypeScore=83.8062;InbreedingCoeff=0.8334;MQ=45.96;MQ0=13;MQRankSum=-2.888;QD=24.84;ReadPosRankSum=-0.022;VQSLOD=2.9007;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:64:99:0,178,3896	0/0:6,0:5:9.03:0,9,165	0/0:27,0:7:21.07:0,21,441	0/0:22,0:5:12.04:0,12,248	0/0:19,0:19:42.14:0,42,867	0/0:25,0:25:75.26:0,75,1654	0/0:30,0:30:81.24:0,81,1740	1/1:1,3:3:9.03:145,9,0	0/0:30,0:28:75.26:0,75,1653	0/0:25,0:25:69.24:0,69,1481	0/0:21,0:20:57.20:0,57,1256	0/0:33,0:29:78.27:0,78,1720	0/0:15,0:14:39.13:0,39,859	0/0:25,0:25:66.23:0,66,1450	0/0:26,0:26:72.25:0,72,1586	0/0:31,0:31:81.28:0,81,1786	0/0:39,0:37:96.33:0,96,2119	0/0:25,0:25:69.19:0,69,1477	./.	1/1:0,2:2:6.02:96,6,0	./.	0/0:12,0:12:30.10:0,30,646	0/0:23,0:23:51.18:0,51,1125	0/0:35,0:35:87.30:0,87,1919	0/0:22,0:22:54.19:0,54,1190	0/0:28,0:26:78.27:0,78,1721	1/1:0,1:1:3.01:48,3,0	0/0:11,0:11:33.11:0,33,728
chr10	104780535	.	C	CA	939.04	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.917;DP=602;FS=80.472;HRun=1;HaplotypeScore=89.5411;InbreedingCoeff=0.9303;MQ=83.71;MQ0=0;MQRankSum=-7.926;QD=21.34;ReadPosRankSum=-1.515;VQSLOD=-0.4317;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,1758	0/0:4,0:4:9.03:0,9,126	0/0:19,0:19:53.76:0,54,688	0/0:30,0:30:51.19:0,51,993	0/0:19,0:19:45.14:0,45,605	0/0:16,0:16:48.12:0,48,649	0/0:28,0:28:84.19:0,84,1111	1/1:0,12:15:45.06:452,45,0	0/0:29,0:29:87.17:0,87,1168	0/0:30,0:30:87.27:0,87,1178	0/0:20,0:20:54.18:0,54,753	0/0:20,0:20:60.20:0,60,831	0/0:25,0:25:72.15:0,72,957	0/0:33,0:33:96.23:0,96,1287	0/0:28,0:28:84.19:0,84,1128	0/0:31,0:31:93.18:0,93,1232	0/0:25,0:25:72.24:0,72,1002	0/0:26,0:26:78.26:0,78,1087	1/1:0,1:3:4.82:35,5,0	1/1:0,8:8:24.01:223,24,0	1/1:0,6:7:9.94:100,10,0	0/0:22,0:22:60.66:0,61,820	0/0:20,0:20:57.15:0,57,772	0/0:38,0:38:99:0,108,1466	0/0:23,0:23:69.02:0,69,840	0/0:24,0:24:63.21:0,63,875	1/1:0,11:11:32.95:294,33,0	0/0:4,0:4:9.03:0,9,126
chr10	104780536	.	CAGATT	C	1491.47	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.846;DP=608;FS=104.441;HRun=0;HaplotypeScore=129.2171;InbreedingCoeff=0.9550;MQ=83.63;MQ0=0;MQRankSum=-8.447;QD=33.90;ReadPosRankSum=-0.716;VQSLOD=0.0521;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,3975	0/0:4,0:4:9.03:0,9,290	0/0:20,0:20:60.16:0,60,1591	0/0:30,0:30:87.97:0,88,2331	0/0:20,0:20:57.19:0,57,1643	0/0:16,0:16:48.16:0,48,1467	0/0:28,0:28:78.22:0,78,2290	1/1:3,12:15:39.10:608,39,0	0/0:29,0:29:87.30:0,87,2668	0/0:31,0:31:84.28:0,84,2534	0/0:20,0:20:60.21:0,60,1763	0/0:20,0:20:60.21:0,60,1888	0/0:25,0:25:75.26:0,75,2294	0/0:34,0:34:99:0,99,2967	0/0:28,0:28:81.28:0,81,2548	0/0:31,0:31:90.31:0,90,2728	0/0:26,0:26:75.26:0,75,2343	0/0:27,0:27:81.28:0,81,2595	1/1:2,1:3:8.98:97,9,0	1/1:0,8:8:22.47:282,22,0	1/1:1,6:7:14.93:217,15,0	0/0:22,0:22:66.23:0,66,2040	0/0:20,0:20:57.20:0,57,1676	0/0:38,0:38:99:0,108,3419	0/0:23,0:23:63.22:0,63,1929	0/0:24,0:24:69.19:0,69,2106	1/1:0,11:11:32.14:457,32,0	0/0:4,0:4:9.03:0,9,291
chr10	104780969	.	AG	A	110.93	PASS	AB=0.750;AC=1;AF=0.018;AN=56;BaseQRankSum=5.883;DP=630;FS=4.097;HRun=4;HaplotypeScore=82.2532;InbreedingCoeff=-0.0259;MQ=56.85;MQ0=7;MQRankSum=-5.579;QD=7.40;ReadPosRankSum=1.327;VQSLOD=0.3673;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1540	0/1:9,5:15:60.82:185,0,61	0/0:33,0:15:36.07:0,36,474	0/0:31,2:13:2.21:0,2,317	0/0:18,0:18:51.17:0,51,704	0/0:23,0:23:69.23:0,69,962	0/0:17,0:17:49.04:0,49,664	0/0:19,0:19:57.15:0,57,713	0/0:27,0:28:45.40:0,45,1034	0/0:31,0:31:90.29:0,90,1227	0/0:18,0:18:51.17:0,51,705	0/0:24,0:24:72.24:0,72,1002	0/0:18,0:18:54.15:0,54,716	0/0:17,0:17:51.15:0,51,680	0/0:21,0:21:63.20:0,63,859	0/0:18,0:18:54.15:0,54,706	0/0:19,0:20:30.14:0,30,663	0/0:22,0:22:60.20:0,60,834	0/0:18,1:18:20.58:0,21,657	0/0:17,0:17:48.15:0,48,653	0/0:33,0:33:87.28:0,87,1196	0/0:29,0:29:84.27:0,84,1152	0/0:15,0:15:45.11:0,45,576	0/0:37,0:38:99:0,101,1369	0/0:21,1:22:57.17:0,57,847	0/0:18,0:18:51.13:0,51,677	0/0:19,0:19:57.17:0,57,762	0/0:6,0:5:15.05:0,15,209
chr10	104781011	.	G	GAGA	246.34	PASS	AB=0.706;AC=1;AF=0.018;AN=56;BaseQRankSum=4.826;DP=656;FS=0.000;HRun=0;HaplotypeScore=115.9825;InbreedingCoeff=-0.0184;MQ=58.38;MQ0=1;MQRankSum=-4.423;QD=20.53;ReadPosRankSum=-0.988;VQSLOD=3.3557;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:45:95.17:0,95,2040	0/1:5,5:12:99:321,0,108	0/0:24,0:11:27.04:0,27,368	0/0:34,0:20:39.33:0,39,558	0/0:18,0:18:54.15:0,54,867	0/0:23,0:23:58.56:0,59,919	0/0:16,0:16:47.88:0,48,696	0/0:20,0:20:44.99:0,45,769	0/0:30,0:30:87.30:0,87,1461	0/0:36,0:36:99:0,105,1765	0/0:19,0:19:57.18:0,57,919	0/0:25,0:25:69.19:0,69,1102	0/0:25,0:25:75.26:0,75,1273	0/0:18,0:18:54.15:0,54,854	0/0:27,0:27:78.27:0,78,1330	0/0:19,0:19:57.16:0,57,896	0/0:22,0:22:40.99:0,41,956	0/0:20,0:20:57.10:0,57,883	0/0:17,0:18:47.17:0,47,742	0/0:25,0:25:69.22:0,69,1147	0/0:31,0:31:87.24:0,87,1421	0/0:25,0:25:75.26:0,75,1259	0/0:25,0:25:68.97:0,69,1101	0/0:31,0:31:80.04:0,80,1230	0/0:24,0:25:72.04:0,72,1137	0/0:16,0:16:48.15:0,48,793	0/0:19,0:19:51.14:0,51,793	0/0:8,0:8:21.07:0,21,358
chr10	104781217	.	AGC	A	1322.07	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.966;DP=499;FS=6.349;HRun=0;HaplotypeScore=89.7665;InbreedingCoeff=0.9920;MQ=87.48;MQ0=1;MQRankSum=-10.193;QD=20.34;ReadPosRankSum=-1.440;VQSLOD=2.8911;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,150,2929	0/0:11,0:11:27.09:0,27,546	0/0:14,0:14:39.12:0,39,734	0/0:29,0:28:74.57:0,75,1189	0/0:20,0:20:60.19:0,60,1179	0/0:19,0:19:54.17:0,54,1047	0/0:16,0:16:45.15:0,45,911	1/1:1,21:21:63.15:658,63,0	0/0:15,0:15:42.14:0,42,841	0/0:15,0:15:45.15:0,45,908	0/0:20,0:20:60.19:0,60,1166	0/0:17,0:17:48.15:0,48,937	0/0:10,0:10:30.10:0,30,609	0/0:11,0:11:33.11:0,33,670	0/0:22,0:22:60.19:0,60,1179	0/0:15,0:15:45.15:0,45,914	0/0:30,0:30:90.31:0,90,1827	0/0:17,0:17:51.18:0,51,1035	1/1:0,8:8:24.06:253,24,0	1/1:0,7:7:15.03:145,15,0	1/1:4,13:17:15.79:136,16,0	0/0:15,0:15:45.15:0,45,910	0/0:10,0:10:30.10:0,30,597	0/0:27,0:27:81.26:0,81,1608	0/0:11,0:11:33.11:0,33,670	0/0:25,0:25:75.26:0,75,1516	1/1:2,9:11:32.99:303,33,0	0/0:15,0:15:45.15:0,45,914
chr10	104781221	.	CTGTTTCCTG	C	3652.60	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.953;DP=490;FS=2.654;HRun=0;HaplotypeScore=149.6241;InbreedingCoeff=0.9932;MQ=85.72;MQ0=1;MQRankSum=-10.691;QD=60.88;ReadPosRankSum=-0.916;VQSLOD=3.5747;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,148,7110	0/0:11,0:11:30.10:0,30,1341	0/0:13,0:13:39.13:0,39,1632	0/0:28,0:26:70.54:0,71,2749	0/0:20,0:20:60.21:0,60,2927	0/0:17,0:17:51.18:0,51,2475	0/0:17,0:17:48.16:0,48,2363	1/1:0,21:20:60.21:1608,60,0	0/0:13,0:13:39.13:0,39,1890	0/0:15,0:15:45.15:0,45,2215	0/0:18,0:18:54.19:0,54,2720	0/0:16,0:16:45.15:0,45,2231	0/0:10,0:10:30.10:0,30,1416	0/0:12,0:12:36.12:0,36,1814	0/0:21,0:21:60.21:0,60,2961	0/0:15,0:15:45.15:0,45,2271	0/0:32,0:32:96.33:0,96,4782	0/0:18,0:18:54.19:0,54,2690	1/1:0,8:8:24.08:645,24,0	1/1:0,7:7:15.05:390,15,0	1/1:2,13:15:17.99:314,18,0	0/0:15,0:15:45.15:0,45,2195	0/0:10,0:10:30.09:0,30,1391	0/0:27,0:27:81.28:0,81,3963	0/0:11,0:11:33.11:0,33,1671	0/0:26,0:26:78.27:0,78,3561	1/1:0,9:9:27.09:696,27,0	0/0:15,0:15:45.15:0,45,2224
chr10	104781227	.	CCTG	C	1719.90	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.143;DP=507;FS=7.146;HRun=0;HaplotypeScore=99.4359;InbreedingCoeff=0.9932;MQ=83.57;MQ0=1;MQRankSum=-9.253;QD=25.67;ReadPosRankSum=-1.737;VQSLOD=2.6052;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,3538	0/0:11,0:11:27.09:0,27,645	0/0:13,0:13:38.70:0,39,784	0/0:29,0:27:64.95:0,65,1454	0/0:22,0:22:66.23:0,66,1590	0/0:16,0:16:48.16:0,48,1183	0/0:18,0:18:51.18:0,51,1249	1/1:21,4:24:72.18:870,72,0	0/0:14,0:14:42.14:0,42,992	0/0:17,0:17:51.18:0,51,1251	0/0:19,0:19:57.20:0,57,1394	0/0:16,0:16:45.11:0,45,1054	0/0:9,0:9:27.09:0,27,666	0/0:12,0:12:36.12:0,36,877	0/0:22,0:22:63.22:0,63,1549	0/0:16,0:16:48.16:0,48,1175	0/0:35,0:35:99:0,105,2569	0/0:20,0:20:60.21:0,60,1395	1/1:9,0:9:27.08:337,27,0	1/1:7,3:10:15.05:180,15,0	1/1:14,0:14:17.74:189,18,0	0/0:15,0:15:42.14:0,42,1027	0/0:12,0:12:33.11:0,33,805	0/0:25,0:25:75.26:0,75,1849	0/0:12,0:12:36.12:0,36,880	0/0:22,0:22:66.23:0,66,1622	1/1:9,0:9:27.08:318,27,0	0/0:15,0:15:45.15:0,45,1079
chr10	104781424	.	C	CAA	1407.86	PASS	AB=0.788;AC=14;AF=0.259;AN=54;BaseQRankSum=1.152;DP=534;FS=1.052;HRun=15;HaplotypeScore=93.2263;InbreedingCoeff=0.5721;MQ=50.08;MQ0=19;MQRankSum=-6.913;QD=8.43;ReadPosRankSum=-1.447;VQSLOD=1.3388;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,1:40:23.71:0,24,429	./.	0/1:20,0:3:0.23:0,0,0	0/0:24,0:6:4.24:0,4,11	0/0:29,0:37:37.13:0,37,370	1/1:14,0:14:9.46:91,9,0	0/1:10,9:17:32.25:73,0,32	0/1:14,3:19:18.01:216,0,18	0/0:14,0:15:35.10:0,35,248	0/0:15,0:14:32.15:0,32,224	0/0:15,1:16:10.74:0,11,194	0/0:22,0:23:40.77:0,41,343	0/0:8,2:11:14.42:0,14,90	0/0:15,0:14:24.93:0,25,169	0/0:13,0:16:25.78:0,26,182	0/0:11,0:11:20.41:0,20,148	0/0:32,0:30:52.40:0,52,380	0/0:18,0:18:32.32:0,32,222	1/1:13,3:17:8.17:230,8,0	1/1:10,4:14:31.21:289,31,0	1/1:4,1:5:4.83:43,5,0	0/0:10,0:8:8.76:0,9,71	0/0:18,0:21:28.93:0,29,238	0/0:13,0:11:25.46:0,25,181	1/1:20,6:30:9.54:423,10,0	0/0:24,0:25:56.32:0,56,428	0/1:13,4:17:37.92:209,0,38	0/0:12,0:12:17.54:0,18,130
chr10	104781699	.	T	TC	4473.32	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-5.967;DP=576;FS=0.400;HRun=1;HaplotypeScore=64.3308;InbreedingCoeff=0.9950;MQ=72.50;MQ0=0;MQRankSum=-1.730;QD=42.20;ReadPosRankSum=-1.595;VQSLOD=4.6462;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1533	1/1:2,9:11:33.11:505,33,0	0/0:13,0:13:39.09:0,39,496	0/0:10,0:9:18.06:0,18,240	0/0:18,0:18:54.12:0,54,697	0/0:21,0:21:63.20:0,63,864	0/0:35,0:35:99:0,102,1374	1/1:0,26:26:78.21:1124,78,0	0/0:36,0:36:99:0,108,1477	0/0:18,0:17:48.14:0,48,627	0/0:9,0:9:24.08:0,24,333	0/0:30,0:30:87.28:0,87,1199	0/0:27,0:27:78.22:0,78,1035	0/0:22,0:22:66.21:0,66,906	0/0:32,0:32:96.28:0,96,1306	0/0:17,0:17:48.15:0,48,651	0/0:32,0:32:90.26:0,90,1208	0/0:19,0:19:57.19:0,57,797	1/1:2,21:23:58.08:879,58,0	1/1:1,7:8:21.07:327,21,0	1/1:0,18:18:48.16:750,48,0	0/0:8,0:8:24.08:0,24,330	0/0:14,0:14:36.12:0,36,503	0/0:34,0:34:99:0,102,1342	0/0:7,0:7:21.07:0,21,294	0/0:20,0:20:54.15:0,54,719	1/1:1,19:20:57.19:888,57,0	0/0:9,0:9:21.07:0,21,293
chr10	104781765	.	A	AAAAAAAAAACC	9269.96	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-3.013;DP=656;FS=5.840;HRun=0;HaplotypeScore=214.8960;InbreedingCoeff=0.9110;MQ=67.60;MQ0=0;MQRankSum=-9.826;QD=85.83;ReadPosRankSum=-5.139;VQSLOD=3.3575;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,3304	0/0:13,0:13:0.82:0,1,237	0/0:15,0:14:25.92:0,26,737	0/0:18,0:16:26.83:0,27,451	0/0:28,0:28:78.24:0,78,2252	0/0:17,0:17:48.10:0,48,1184	0/0:40,0:40:99:0,114,2906	1/1:10,13:29:83.92:2848,84,0	0/0:24,0:24:69.22:0,69,1861	0/0:32,0:32:87.75:0,88,2488	0/0:19,0:19:51.17:0,51,1512	0/0:25,0:25:69.15:0,69,1932	0/0:19,0:19:50.52:0,51,1324	0/0:17,0:17:48.15:0,48,1344	0/0:32,0:32:93.22:0,93,2401	0/0:23,0:23:66.19:0,66,1862	0/0:35,0:34:96.27:0,96,2829	0/0:26,0:26:75.21:0,75,2235	1/1:22,5:27:62.56:1766,63,0	1/1:5,10:21:39.06:1274,39,0	1/1:7,4:11:24.03:831,24,0	0/0:25,0:25:68.94:0,69,1910	0/0:16,0:16:24.13:0,24,1033	0/0:41,0:41:99:0,105,3269	0/0:10,0:10:27.09:0,27,816	0/0:30,0:30:87.27:0,87,2533	1/1:10,8:20:60.17:2550,60,0	0/0:4,0:4:3.55:0,4,106
chr10	104781782	.	A	AACCC	605.59	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.140;DP=641;FS=9.772;HRun=0;HaplotypeScore=129.2729;InbreedingCoeff=0.9905;MQ=65.30;MQ0=1;MQRankSum=-4.338;QD=50.47;ReadPosRankSum=-0.209;VQSLOD=4.0911;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,2372	1/1:3,9:11:27.09:700,27,0	0/0:22,0:20:54:0,54,923	0/0:17,0:16:35.40:0,35,667	0/0:32,0:32:96.33:0,96,1850	0/0:18,0:18:54.17:0,54,1042	0/0:32,0:32:90.31:0,90,1763	0/0:30,0:30:88.40:0,88,1500	0/0:22,0:22:63.21:0,63,1211	0/0:32,0:32:87.77:0,88,1712	0/0:20,0:20:57.16:0,57,1100	0/0:24,0:24:72.25:0,72,1419	0/0:14,0:14:39.13:0,39,778	0/0:17,0:17:51.17:0,51,998	0/0:23,0:23:69.24:0,69,1364	0/0:21,0:21:63.22:0,63,1249	0/0:40,0:39:99:0,100,2130	0/0:24,0:24:72.22:0,72,1398	0/0:22,0:22:62.49:0,62,1040	0/0:15,0:15:35.76:0,36,565	0/0:15,0:15:44.89:0,45,724	0/0:26,0:26:78.25:0,78,1508	0/0:16,0:16:42.13:0,42,803	0/0:39,0:39:99:0,114,2211	0/0:12,0:12:36.12:0,36,710	0/0:30,0:30:87.28:0,87,1685	0/0:18,0:18:50.75:0,51,867	0/0:6,0:6:18.06:0,18,342
chr10	104781931	.	CTTG	C	125.70	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.426;DP=568;FS=0.000;HRun=0;HaplotypeScore=82.4574;InbreedingCoeff=0.9523;MQ=88.63;MQ0=0;MQRankSum=-0.175;QD=17.96;ReadPosRankSum=-0.128;VQSLOD=2.8408;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.26:0,75,1765	1/1:0,7:7:12.02:212,12,0	0/0:21,0:21:51.03:0,51,1245	0/0:35,0:33:91.94:0,92,1914	0/0:16,0:16:42.13:0,42,924	0/0:18,0:18:54.18:0,54,1190	0/0:24,0:24:69.24:0,69,1611	0/0:24,0:24:66.22:0,66,1456	0/0:17,0:17:51.16:0,51,1111	0/0:15,0:15:45.15:0,45,1063	0/0:5,0:5:15.05:0,15,334	0/0:25,0:25:75.24:0,75,1706	0/0:15,0:15:45.14:0,45,1017	0/0:13,0:13:39.13:0,39,897	0/0:28,0:28:81.28:0,81,1912	0/0:13,0:13:39.13:0,39,917	0/0:29,0:29:87.30:0,87,2057	0/0:20,0:20:60.21:0,60,1390	0/0:12,0:12:36.08:0,36,757	0/0:18,0:18:45.15:0,45,1039	0/0:52,0:52:99:0,154,3544	0/0:21,0:21:63.22:0,63,1414	0/0:11,0:11:33.07:0,33,728	0/0:36,0:36:99:0,108,2549	0/0:13,0:13:39.13:0,39,868	0/0:23,0:23:69.24:0,69,1587	0/0:16,0:16:45.15:0,45,1062	0/0:14,0:14:42.14:0,42,992
chr10	104782367	.	A	AACTCCCAGTAACCCG	146.63	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.732;DP=581;FS=0.000;HRun=0;HaplotypeScore=230.7866;InbreedingCoeff=0.7784;MQ=74.59;MQ0=0;MQRankSum=-1.688;QD=36.66;ReadPosRankSum=-0.577;VQSLOD=2.8179;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,4767	1/1:0,1:4:3.01:224,3,0	0/0:21,0:21:57.14:0,57,1669	0/0:27,0:27:66.55:0,67,2157	0/0:25,0:25:72.25:0,72,3217	0/0:28,0:28:78.25:0,78,3196	0/0:22,0:22:54.19:0,54,2347	0/0:25,0:25:72.21:0,72,2654	0/0:24,0:24:66.23:0,66,2806	0/0:23,0:23:69.24:0,69,2984	0/0:15,0:15:45.14:0,45,1874	0/0:15,0:15:45.11:0,45,1760	0/0:17,0:17:51.18:0,51,2115	0/0:19,0:19:54.15:0,54,2256	0/0:16,0:16:48.11:0,48,1864	0/0:17,0:17:51.18:0,51,2092	0/0:26,0:26:72.22:0,72,3070	0/0:28,0:28:78.27:0,78,3234	0/0:22,0:21:60.17:0,60,1955	0/0:15,0:15:45.05:0,45,1760	0/0:21,0:21:51.16:0,51,1910	0/0:19,0:19:54.19:0,54,2266	0/0:12,0:12:36.11:0,36,1450	0/0:37,0:37:99:0,108,4163	0/0:11,0:11:30.10:0,30,1291	0/0:24,0:24:66.21:0,66,2658	0/0:25,0:25:75.18:0,75,2744	0/0:5,0:5:15.05:0,15,675
chr10	104783610	.	TGGGTAACTACGCA	T	746.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.473;DP=712;FS=1.404;HRun=0;HaplotypeScore=255.7930;InbreedingCoeff=0.9958;MQ=84.12;MQ0=0;MQRankSum=-4.508;QD=57.43;ReadPosRankSum=2.516;VQSLOD=2.8704;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,6554	1/1:5,8:13:21.07:839,21,0	0/0:17,0:17:48.13:0,48,2440	0/0:28,0:28:73.80:0,74,4040	0/0:26,0:26:78.27:0,78,4794	0/0:16,0:16:48.16:0,48,2987	0/0:28,0:28:84.29:0,84,5390	0/0:31,0:30:81.24:0,81,4492	0/0:29,0:29:87.27:0,87,5165	0/0:31,0:31:87.30:0,87,5360	0/0:18,0:18:54.19:0,54,3417	0/0:20,0:20:60.21:0,60,3457	0/0:19,0:19:51.16:0,51,3094	0/0:32,0:32:96.33:0,96,6076	0/0:36,0:36:99:0,105,6492	0/0:28,0:28:81.28:0,81,5324	0/0:31,0:31:90.31:0,90,5725	0/0:26,0:26:75.26:0,75,4841	0/0:22,0:22:66.22:0,66,3608	0/0:25,0:25:75.26:0,75,4474	0/0:33,0:33:96.33:0,96,6016	0/0:30,0:30:87.28:0,87,5145	0/0:19,0:19:54.19:0,54,3424	0/0:23,0:23:66.23:0,66,4176	0/0:20,0:20:54.19:0,54,3492	0/0:37,0:37:99:0,108,6482	0/0:21,0:21:57.20:0,57,3443	0/0:13,0:13:36.08:0,36,2013
chr10	104784135	.	T	TGA	2906.70	PASS	AB=0.629;AC=16;AF=0.286;AN=56;BaseQRankSum=-1.840;DP=701;FS=0.461;HRun=0;HaplotypeScore=99.3374;InbreedingCoeff=0.8585;MQ=60.75;MQ0=12;MQRankSum=1.839;QD=15.06;ReadPosRankSum=-2.000;VQSLOD=3.2817;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:93.58:0,94,951	1/1:7,0:6:5.96:45,6,0	0/0:37,0:21:57.04:0,57,580	0/0:31,0:17:10.40:0,10,290	0/0:16,0:15:33.02:0,33,352	1/1:3,3:28:32.90:427,33,0	1/1:9,0:28:7.20:256,7,0	1/1:10,20:29:52.88:560,53,0	0/0:30,0:30:84.15:0,84,938	0/0:26,0:26:39.63:0,40,654	0/0:12,0:12:32.66:0,33,356	0/0:30,0:30:66.10:0,66,716	0/0:24,0:24:33.33:0,33,561	0/0:19,0:19:42.07:0,42,458	0/0:23,0:23:41.87:0,42,469	0/0:30,0:30:75.16:0,75,856	0/0:31,0:31:43.26:0,43,659	0/0:40,0:40:99:0,101,1064	0/1:7,10:15:1.18:339,0,1	1/1:9,11:20:8.74:419,9,0	1/1:15,10:24:34.47:570,34,0	0/0:18,0:18:42.06:0,42,457	0/0:14,0:14:32.61:0,33,316	0/0:39,0:39:83.78:0,84,959	1/1:2,0:15:21.53:257,22,0	0/0:25,0:25:54.07:0,54,596	0/1:9,13:22:0.08:225,0,0	0/0:14,0:14:26.91:0,27,311
chr10	104784364	.	AAAATAAAT	A	553.36	PASS	AC=6;AF=0.176;AN=34;BaseQRankSum=3.865;DP=246;FS=1.407;HRun=0;HaplotypeScore=67.1909;InbreedingCoeff=0.5626;MQ=68.32;MQ0=4;MQRankSum=-4.444;QD=20.49;ReadPosRankSum=-0.392;VQSLOD=2.5471;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:18.06:0,18,732	./.	./.	./.	./.	1/1:6,3:9:9.03:222,9,0	./.	0/0:27,0:24:9.01:0,9,122	0/0:4,0:4:6.02:0,6,189	./.	0/0:10,0:10:3.01:0,3,122	0/0:4,0:4:6.02:0,6,244	./.	0/0:7,0:7:9.03:0,9,313	0/0:2,0:2:3.01:0,3,122	./.	0/0:26,0:26:54.19:0,54,2027	0/0:23,0:23:24.08:0,24,900	1/1:7,4:10:12.04:296,12,0	0/0:10,0:10:3.01:0,3,73	0/0:6,0:6:3.01:0,3,65	./.	./.	./.	1/1:5,2:7:6.02:148,6,0	0/0:6,0:6:9.03:0,9,366	0/0:8,0:8:6.02:0,6,147	0/0:19,0:19:36.12:0,36,1310
chr10	104784372	.	T	TAAAC	757.45	PASS	AB=1.000;AC=9;AF=0.180;AN=50;BaseQRankSum=5.310;DP=211;FS=1.550;HRun=0;HaplotypeScore=50.4891;InbreedingCoeff=0.6088;MQ=61.65;MQ0=4;MQRankSum=-4.241;QD=12.02;ReadPosRankSum=-2.353;VQSLOD=2.1396;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:11:30.03:0,30,436	./.	0/0:8,0:8:12.02:0,12,118	0/0:2,0:1:2.99:0,3,23	./.	0/0:7,0:7:17.99:0,18,172	0/0:1,0:1:2.90:0,3,16	1/1:29,0:25:56.76:392,57,0	0/0:4,0:4:12:0,12,131	0/0:5,0:4:11.97:0,12,101	0/0:7,0:7:20.99:0,21,207	0/0:2,0:2:6.02:0,6,113	0/0:5,0:5:14.97:0,15,123	0/0:8,0:8:14.61:0,15,173	0/0:3,0:3:9:0,9,106	0/0:2,0:2:3:0,3,25	0/0:24,0:24:69.09:0,69,1034	0/0:20,0:20:44.81:0,45,559	0/1:13,0:12:13.93:99,0,14	1/1:2,6:8:8.91:113,9,0	1/1:6,0:6:14.83:149,15,0	./.	0/0:3,0:3:8.98:0,9,72	0/0:2,0:2:5.84:0,6,39	0/0:6,0:6:14.94:0,15,130	0/0:4,0:4:12.02:0,12,190	1/1:2,5:7:6.02:151,6,0	0/0:23,0:23:65.95:0,66,800
chr10	104784963	.	ACTATGTCCTCC	A	464.81	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.703;DP=663;FS=1.730;HRun=0;HaplotypeScore=205.1750;InbreedingCoeff=0.9796;MQ=98.72;MQ0=0;MQRankSum=-3.828;QD=66.40;ReadPosRankSum=0.753;VQSLOD=3.5537;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,7606	1/1:0,7:7:15.05:553,15,0	0/0:35,0:35:99:0,99,4389	0/0:33,0:33:96.33:0,96,4049	0/0:18,0:18:54.19:0,54,3151	0/0:20,0:20:60.21:0,60,3213	0/0:22,0:22:66.23:0,66,3451	0/0:29,0:29:87.29:0,87,4260	0/0:24,0:24:72.25:0,72,4083	0/0:19,0:19:57.16:0,57,2459	0/0:7,0:7:21.07:0,21,1112	0/0:22,0:22:66.23:0,66,3251	0/0:28,0:28:78.27:0,78,4102	0/0:22,0:22:66.23:0,66,3719	0/0:27,0:27:81.28:0,81,4070	0/0:14,0:14:42.14:0,42,2274	0/0:41,0:40:99:0,123,6824	0/0:23,0:23:66.23:0,66,3475	0/0:24,0:24:72.25:0,72,3445	0/0:24,0:24:72.25:0,72,4046	0/0:47,0:47:99:0,138,7748	0/0:14,0:14:42.11:0,42,2043	0/0:21,0:21:60.19:0,60,3317	0/0:26,0:26:78.27:0,78,4173	0/0:21,0:21:57.20:0,57,3136	0/0:11,0:11:33.11:0,33,1795	0/0:22,0:22:66.23:0,66,3714	0/0:12,0:12:36.12:0,36,1724
chr10	104785869	.	CA	C	64.21	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.727;DP=562;FS=0.000;HRun=1;HaplotypeScore=57.0692;InbreedingCoeff=0.9519;MQ=62.40;MQ0=7;MQRankSum=0.155;QD=16.05;ReadPosRankSum=0.599;VQSLOD=3.4517;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.73:0,76,1193	1/1:0,4:4:12.04:150,12,0	0/0:12,0:8:21.07:0,21,331	0/0:19,0:7:21.03:0,21,305	0/0:17,0:17:45.15:0,45,719	0/0:11,0:11:30.10:0,30,480	0/0:21,0:21:60.20:0,60,959	0/0:22,0:22:66.21:0,66,1000	0/0:16,0:16:48.15:0,48,744	0/0:19,0:19:54.18:0,54,853	0/0:15,0:15:42.13:0,42,640	0/0:29,0:29:87.28:0,87,1364	0/0:20,0:20:57.16:0,57,857	0/0:20,0:20:60.20:0,60,959	0/0:35,0:35:99:0,105,1673	0/0:21,0:21:63.21:0,63,1006	0/0:25,0:25:51.71:0,52,1035	0/0:22,0:22:63.21:0,63,1007	0/0:16,0:16:45.15:0,45,719	0/0:17,0:17:48.15:0,48,736	0/0:31,0:31:90.31:0,90,1439	0/0:13,0:13:33.11:0,33,523	0/0:16,0:16:42.14:0,42,671	0/0:30,0:30:84.26:0,84,1317	0/0:31,0:31:87.05:0,87,1383	0/0:18,0:18:54.13:0,54,793	0/0:28,0:28:84.29:0,84,1342	0/0:7,0:7:18.06:0,18,288
chr10	104786486	.	G	GA	740.35	PASS	AB=0.588;AC=9;AF=0.161;AN=56;BaseQRankSum=0.413;DP=343;FS=56.840;HRun=0;HaplotypeScore=65.3167;InbreedingCoeff=0.7219;MQ=67.37;MQ0=0;MQRankSum=0.478;QD=10.14;ReadPosRankSum=5.531;VQSLOD=1.6015;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:23.97:0,24,202	0/0:5,0:5:10.88:0,11,48	0/0:26,0:17:47.32:0,47,398	0/0:17,0:14:33.13:0,33,293	0/0:10,0:10:12:0,12,115	0/0:13,0:13:20.98:0,21,177	0/0:15,0:15:27.76:0,28,214	1/1:6,8:14:13.79:212,14,0	0/0:15,0:15:29.96:0,30,250	0/0:3,0:3:9:0,9,81	0/0:10,0:10:18.47:0,18,158	0/0:7,0:7:14.96:0,15,124	0/0:12,0:11:20.95:0,21,173	0/0:7,0:7:17.98:0,18,151	0/0:14,0:14:35.99:0,36,310	0/0:13,0:13:35.98:0,36,311	0/0:21,0:21:41.95:0,42,366	0/0:13,0:13:35.88:0,36,297	1/1:1,5:6:18.01:185,18,0	1/1:4,6:10:8.94:101,9,0	1/1:7,16:23:6.36:213,6,0	0/0:9,0:9:16.37:0,16,139	0/0:3,0:3:3:0,3,27	0/0:21,0:21:39.82:0,40,327	0/0:8,0:8:9:0,9,79	0/0:7,0:7:18:0,18,159	0/1:6,12:20:19.92:180,0,20	0/0:5,0:5:14.62:0,15,99
chr10	104786809	.	TA	T	324.96	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.927;DP=640;FS=4.547;HRun=1;HaplotypeScore=67.8255;InbreedingCoeff=0.9950;MQ=89.34;MQ0=0;MQRankSum=-1.665;QD=27.08;ReadPosRankSum=-0.165;VQSLOD=3.2797;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,2091	1/1:0,12:12:30.10:419,30,0	0/0:22,0:22:66.10:0,66,976	0/0:25,0:26:71.75:0,72,1056	0/0:11,0:11:33.10:0,33,503	0/0:22,0:22:66.20:0,66,1027	0/0:18,0:18:54.15:0,54,812	0/0:26,0:26:78.25:0,78,1207	0/0:29,0:29:87.28:0,87,1366	0/0:20,0:20:54.18:0,54,856	0/0:19,0:19:51.07:0,51,761	0/0:29,0:29:81.25:0,81,1239	0/0:23,0:23:69.20:0,69,1049	0/0:23,0:23:69.24:0,69,1101	0/0:34,0:34:99:0,102,1578	0/0:18,0:18:54.18:0,54,863	0/0:35,0:35:99:0,105,1677	0/0:22,0:22:66.23:0,66,1054	0/0:28,0:28:84.28:0,84,1289	0/0:13,0:13:38.85:0,39,564	0/0:42,0:42:99:0,120,1891	0/0:14,0:14:42.13:0,42,647	0/0:15,0:15:41.97:0,42,552	0/0:26,0:26:78.27:0,78,1246	0/0:16,0:16:48.16:0,48,766	0/0:26,0:26:75.24:0,75,1176	0/0:20,0:20:60.20:0,60,949	0/0:7,0:7:21:0,21,305
chr10	104787916	.	T	TAA	1936.59	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.436;DP=505;FS=5.000;HRun=11;HaplotypeScore=81.6169;InbreedingCoeff=0.9451;MQ=68.69;MQ0=2;MQRankSum=-4.358;QD=20.17;ReadPosRankSum=-1.117;VQSLOD=2.8602;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:35:86.50:0,86,778	1/1:1,4:6:14.54:181,15,0	0/0:18,0:14:4.38:0,4,19	0/0:9,0:8:5.90:0,6,37	0/0:13,0:13:29.95:0,30,268	0/0:23,0:23:44.95:0,45,420	0/0:18,0:20:42.93:0,43,467	1/1:12,2:16:19.30:187,19,0	0/0:10,0:11:29.73:0,30,265	0/0:18,0:18:39.03:0,39,377	0/0:13,0:17:47.28:0,47,408	0/0:16,0:16:32.96:0,33,312	0/0:19,0:19:42:0,42,407	0/0:11,0:11:27.02:0,27,255	0/0:22,0:22:47.47:0,47,420	0/0:22,0:23:53.78:0,54,498	0/0:32,0:31:78.10:0,78,756	0/0:27,0:28:74.84:0,75,710	1/1:9,11:22:38.08:457,38,0	1/1:6,13:20:44.48:590,44,0	1/1:5,9:14:21.54:305,22,0	0/0:19,0:20:30.97:0,31,288	0/0:13,0:14:26.72:0,27,239	0/0:17,0:18:44.80:0,45,419	0/0:10,0:10:30.03:0,30,284	0/0:18,0:18:41.99:0,42,382	1/1:8,6:17:32.08:402,32,0	0/0:13,0:13:36.03:0,36,349
chr10	104788168	.	T	TA	475.83	PASS	AB=0.838;AC=7;AF=0.159;AN=44;BaseQRankSum=-2.425;DP=334;FS=0.000;HRun=12;HaplotypeScore=46.6356;InbreedingCoeff=0.3826;MQ=50.12;MQ0=27;MQRankSum=0.562;QD=8.98;ReadPosRankSum=0.101;VQSLOD=1.8618;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:38:56.48:0,56,413	./.	0/1:4,0:2:15.91:17,0,16	0/0:4,0:1:2.98:0,3,21	0/0:18,0:19:40.77:0,41,287	0/1:4,9:13:16.76:177,0,17	1/1:2,7:9:18.03:175,18,0	./.	0/0:13,0:12:20.80:0,21,151	0/0:28,0:26:44.67:0,45,327	0/0:13,0:13:29.78:0,30,217	0/0:15,0:13:20.80:0,21,153	0/0:14,0:13:20.83:0,21,153	0/1:11,1:11:20.39:20,0,34	0/0:15,0:15:32.77:0,33,241	0/0:12,0:13:25.86:0,26,181	0/0:23,0:21:47.63:0,48,345	0/0:19,0:15:41.72:0,42,305	./.	./.	./.	0/0:5,0:5:11.92:0,12,88	0/0:13,0:14:16.86:0,17,115	0/0:9,0:8:14.71:0,15,109	1/1:6,9:15:6.09:213,6,0	0/0:20,0:19:32.77:0,33,241	./.	0/0:6,0:5:5.01:0,5,28
chr10	104788511	.	AACCTGCTGGTTGGAAGCTG	A	10307.25	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.985;DP=679;FS=2.649;HRun=0;HaplotypeScore=338.2897;InbreedingCoeff=0.9879;MQ=90.45;MQ0=0;MQRankSum=-8.723;QD=102.05;ReadPosRankSum=-0.780;VQSLOD=3.9569;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,11008	1/1:2,4:6:9.03:489,9,0	0/0:35,0:35:71.35:0,71,5439	0/0:23,0:23:56:0,56,3442	0/0:26,0:26:78.27:0,78,6339	0/0:15,0:15:45.15:0,45,3391	0/0:24,0:24:66.23:0,66,5302	1/1:5,18:23:54.17:2240,54,0	0/0:26,0:26:78.25:0,78,6417	0/0:29,0:29:84.28:0,84,6329	0/0:15,0:15:45.14:0,45,3432	0/0:33,0:33:96.33:0,96,8114	0/0:18,0:18:51.18:0,51,4015	0/0:21,0:21:63.22:0,63,5724	0/0:30,0:30:87.30:0,87,7193	0/0:29,0:29:87.28:0,87,6751	0/0:33,0:33:90.28:0,90,7498	0/0:35,0:35:99:0,105,8991	1/1:3,13:16:39.09:1280,39,0	1/1:0,13:13:39.13:1910,39,0	1/1:6,16:22:33.11:1656,33,0	0/0:22,0:22:63.22:0,63,5131	0/0:27,0:27:81.28:0,81,6389	0/0:24,0:24:72.23:0,72,5380	0/0:30,0:30:87.30:0,87,7401	0/0:28,0:28:84.28:0,84,6543	1/1:1,20:21:50.82:2732,51,0	0/0:10,0:10:30.09:0,30,2494
chr10	104789081	.	T	TG	6917.51	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-13.983;DP=733;FS=3.296;HRun=1;HaplotypeScore=71.7408;InbreedingCoeff=0.9996;MQ=95.34;MQ0=0;MQRankSum=-5.549;QD=40.45;ReadPosRankSum=-0.356;VQSLOD=5.2476;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:99:0,141,1804	1/1:1,16:17:48.16:719,48,0	0/0:30,0:30:81.06:0,81,956	0/0:36,0:37:99:0,102,1190	0/0:22,0:22:66.21:0,66,856	0/0:15,0:15:42.12:0,42,531	0/0:24,0:24:72.18:0,72,901	1/1:3,32:35:96.31:1419,96,0	0/0:30,0:30:90.24:0,90,1111	0/0:21,0:21:63.19:0,63,796	0/0:17,0:17:48.15:0,48,619	0/0:33,0:33:99:0,99,1255	0/0:18,0:18:54.18:0,54,699	0/0:23,0:23:66.21:0,66,856	0/0:34,0:34:99:0,102,1323	0/0:25,0:25:75.24:0,75,974	0/0:30,0:30:90.27:0,90,1150	0/0:16,0:16:45.15:0,45,584	1/1:2,20:22:63.20:922,63,0	1/1:1,18:19:54.18:800,54,0	1/1:0,51:51:99:2068,138,0	0/0:26,0:26:78.25:0,78,1012	0/0:28,0:28:77.99:0,78,1012	0/0:37,0:37:99:0,108,1402	0/0:14,0:14:39.13:0,39,505	0/0:26,0:26:78.25:0,78,1008	1/1:2,25:27:66.22:988,66,0	0/0:8,0:8:24.08:0,24,308
chr10	104789919	.	AT	A	1685.98	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.025;DP=548;FS=4.879;HRun=10;HaplotypeScore=74.5864;InbreedingCoeff=0.9744;MQ=76.11;MQ0=0;MQRankSum=-3.773;QD=16.86;ReadPosRankSum=-0.390;VQSLOD=4.1032;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.16:0,75,816	1/1:1,12:13:23.85:208,24,0	0/0:12,0:12:8.20:0,8,118	0/0:19,0:19:22.67:0,23,281	0/0:15,0:15:33.05:0,33,351	0/0:11,1:12:10.02:0,10,322	0/0:23,0:23:60.16:0,60,664	1/1:8,9:17:38.82:315,39,0	0/0:19,0:19:54.09:0,54,570	0/0:29,0:29:74.20:0,74,767	0/0:23,0:23:63.16:0,63,687	0/0:17,0:17:45.11:0,45,489	0/0:18,0:18:48.06:0,48,516	0/0:21,1:22:31.09:0,31,564	0/0:22,0:22:66.18:0,66,730	0/0:23,0:23:63.16:0,63,690	0/0:26,1:27:40.11:0,40,661	0/0:28,0:28:69.15:0,69,744	1/1:2,6:8:20.96:176,21,0	1/1:4,12:16:36.18:327,36,0	1/1:1,12:13:26.90:224,27,0	0/0:19,0:19:51.07:0,51,535	0/0:21,0:21:63.11:0,63,673	0/0:25,0:25:66.11:0,66,699	0/0:17,0:17:48.11:0,48,516	0/0:15,0:15:33.09:0,33,365	1/1:6,27:33:71.97:623,72,0	0/0:14,0:14:36.06:0,36,385
chr10	104790069	.	AC	A	2324.66	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.348;DP=616;FS=2.697;HRun=3;HaplotypeScore=91.7280;InbreedingCoeff=0.9762;MQ=63.93;MQ0=5;MQRankSum=-7.130;QD=23.72;ReadPosRankSum=-2.259;VQSLOD=2.6369;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.22:0,81,1122	1/1:0,10:10:30.05:354,30,0	0/0:32,0:25:41.55:0,42,611	0/0:25,0:19:23.40:0,23,427	0/0:27,0:27:81.27:0,81,1165	0/0:18,0:18:48.16:0,48,684	0/0:27,0:27:69.23:0,69,992	1/1:2,24:21:36.11:444,36,0	0/0:18,0:18:51.09:0,51,706	0/0:33,0:33:99:0,99,1423	0/0:19,0:19:51.17:0,51,733	0/0:13,0:13:39.13:0,39,552	0/0:21,0:21:63.18:0,63,868	0/0:23,0:23:66.21:0,66,928	0/0:15,0:15:45.15:0,45,647	0/0:24,0:24:72.22:0,72,1002	0/0:32,0:32:93.23:0,93,1308	0/0:19,0:19:54.11:0,54,751	1/1:2,6:8:6.02:74,6,0	1/1:0,20:20:56.92:614,57,0	1/1:0,11:11:21:241,21,0	0/0:17,0:17:48.16:0,48,689	0/0:25,0:25:68.22:0,68,988	0/0:44,0:43:99:0,129,1810	0/0:26,0:26:78.25:0,78,1103	0/0:22,0:22:66.21:0,66,926	1/1:0,23:23:66.10:780,66,0	0/0:7,0:7:21.07:0,21,302
chr10	104790091	.	AAATG	A	2504.47	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=13.483;DP=603;FS=0.918;HRun=0;HaplotypeScore=140.7815;InbreedingCoeff=0.7308;MQ=64.87;MQ0=3;MQRankSum=-12.708;QD=20.20;ReadPosRankSum=-1.177;VQSLOD=3.4247;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:94:0,94,1803	0/1:10,0:10:30.99:79,0,31	0/0:31,0:26:56.35:0,56,929	0/0:14,0:11:6.26:0,6,159	0/0:29,0:29:87.28:0,87,1753	0/0:19,0:19:20.76:0,21,380	0/1:25,0:25:13.86:14,0,593	1/1:30,0:26:36.09:454,36,0	0/0:18,0:18:51.15:0,51,911	0/0:26,0:26:78.26:0,78,1630	0/0:18,0:18:54.17:0,54,1103	0/0:15,0:15:45.14:0,45,902	0/0:20,0:20:60.20:0,60,1248	0/0:26,0:26:78.21:0,78,1441	0/0:23,0:23:69.13:0,69,1637	0/0:27,0:27:81.28:0,81,1669	0/0:27,0:27:78.26:0,78,1611	0/0:19,0:19:13.92:0,14,707	1/1:6,1:4:6.01:79,6,0	1/1:12,12:24:69.23:1009,69,0	1/1:5,0:5:9:90,9,0	0/0:14,0:14:42.13:0,42,747	0/0:23,0:23:55.04:0,55,1136	0/0:40,0:39:99:0,109,2061	0/0:24,0:24:20.21:0,20,464	0/0:23,0:23:68.26:0,68,1500	1/1:14,9:23:66.22:952,66,0	0/0:9,0:9:27.04:0,27,532
chr10	104790100	.	AAAG	A	633.44	PASS	AB=0.902;AC=9;AF=0.161;AN=56;BaseQRankSum=11.181;DP=604;FS=13.573;HRun=0;HaplotypeScore=137.7298;InbreedingCoeff=-0.0343;MQ=65.10;MQ0=2;MQRankSum=-2.275;QD=4.66;ReadPosRankSum=0.966;VQSLOD=2.1477;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:93.75:0,94,1635	0/0:12,0:12:36.12:0,36,665	0/0:24,0:21:1.22:0,1,408	0/1:10,0:9:28.24:28,0,83	0/0:35,0:35:99:0,105,1972	0/1:17,0:17:49.50:50,0,164	0/1:23,0:23:25.69:26,0,307	0/0:29,0:26:38.59:0,39,320	0/0:16,0:16:48.16:0,48,824	0/0:27,0:27:81.27:0,81,1586	0/0:18,0:18:48.15:0,48,922	0/0:16,0:16:48.16:0,48,926	0/0:24,0:24:69.23:0,69,1344	0/0:23,0:23:69.23:0,69,1262	0/0:28,0:28:84.28:0,84,1776	0/0:31,0:31:93.19:0,93,1725	0/0:30,0:30:84.27:0,84,1572	0/0:18,0:18:24.07:0,24,764	0/1:10,1:8:18.94:19,0,101	0/1:11,12:23:99:322,0,209	1/1:4,0:4:1.75:21,2,0	0/0:14,0:14:39.11:0,39,623	0/0:21,0:21:60.67:0,61,1025	0/0:33,0:32:96.29:0,96,1669	0/1:25,0:25:94.95:95,0,231	0/0:27,0:27:70.38:0,70,1575	0/1:15,8:23:99:209,0,275	0/0:7,0:7:21.07:0,21,418
chr10	104790127	.	GAAA	G	964.52	PASS	AB=0.814;AC=4;AF=0.071;AN=56;BaseQRankSum=8.987;DP=652;FS=0.490;HRun=3;HaplotypeScore=148.6760;InbreedingCoeff=-0.0443;MQ=59.04;MQ0=0;MQRankSum=-3.171;QD=10.48;ReadPosRankSum=5.250;VQSLOD=0.2468;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1858	0/0:17,0:17:50:0,50,674	0/1:13,0:10:16.57:17,0,183	0/0:9,0:8:23.75:0,24,283	0/0:33,0:33:99:0,99,2067	0/1:10,7:17:11.67:298,0,12	0/1:20,5:26:56.04:266,0,56	0/0:27,0:25:65.02:0,65,808	0/0:18,0:18:54.15:0,54,957	0/0:29,0:29:87.29:0,87,1802	0/0:20,0:20:60.18:0,60,1149	0/0:21,0:21:60.20:0,60,1146	0/0:24,0:24:72.23:0,72,1469	0/0:22,0:22:63.21:0,63,1271	0/0:36,0:36:99:0,105,2218	0/0:31,0:31:93.26:0,93,1893	0/0:30,0:30:90.30:0,90,1762	0/0:19,0:19:54.98:0,55,946	0/0:15,0:14:33.98:0,34,443	0/0:26,0:26:19.93:0,20,487	0/0:13,0:13:26.82:0,27,303	0/0:13,0:13:36.11:0,36,655	0/0:20,0:20:60.19:0,60,1088	0/0:32,0:32:93.27:0,93,1721	0/1:23,13:36:78.34:493,0,78	0/0:31,0:31:55.98:0,56,1803	0/0:28,0:28:42.42:0,42,632	0/0:10,0:10:30.07:0,30,568
chr10	104790131	.	GA	G	213.15	PASS	AB=0.751;AC=3;AF=0.054;AN=56;BaseQRankSum=6.873;DP=661;FS=5.099;HRun=3;HaplotypeScore=126.5495;InbreedingCoeff=-0.0573;MQ=60.44;MQ0=0;MQRankSum=-0.136;QD=2.88;ReadPosRankSum=4.119;VQSLOD=0.3145;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1380	0/0:17,0:17:46.68:0,47,474	0/0:15,0:12:21.10:0,21,396	0/0:10,0:9:18.02:0,18,311	0/0:34,0:34:99:0,102,1423	0/1:10,7:17:52.66:108,0,53	0/1:18,5:23:53.78:54,0,160	0/0:25,0:24:69.66:0,70,889	0/0:18,0:18:54.17:0,54,741	0/0:30,0:30:90.30:0,90,1272	0/0:19,0:19:57.19:0,57,803	0/0:22,0:22:63.18:0,63,851	0/0:24,0:24:69.22:0,69,960	0/0:21,0:21:63.18:0,63,871	0/0:35,1:36:99:0,102,1450	0/0:32,0:32:96.30:0,96,1338	0/0:31,0:31:90.30:0,90,1265	0/0:18,1:19:20.05:0,20,658	0/0:19,0:18:47.07:0,47,542	0/0:27,0:27:68.93:0,69,655	0/0:13,0:13:27.09:0,27,353	0/0:13,0:13:39.13:0,39,546	0/0:20,0:20:57.18:0,57,779	0/0:35,0:35:99:0,102,1394	0/1:21,13:34:99:152,0,228	0/0:31,0:31:65.66:0,66,1205	0/0:28,0:28:71.47:0,71,690	0/0:12,0:12:36.12:0,36,501
chr10	104791341	.	T	TG	1035.98	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=9.329;DP=728;FS=14.001;HRun=2;HaplotypeScore=77.4710;InbreedingCoeff=0.8977;MQ=85.36;MQ0=0;MQRankSum=-3.591;QD=13.45;ReadPosRankSum=2.088;VQSLOD=1.5346;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:40:99:0,114,1413	1/1:0,8:8:18.06:259,18,0	0/0:22,0:22:62.97:0,63,739	0/0:31,0:31:87.17:0,87,1002	0/0:15,0:15:39.12:0,39,483	1/1:15,0:15:40.71:232,41,0	0/1:28,0:28:2.44:278,0,2	0/0:37,0:37:99:0,105,1271	0/0:35,0:35:96.29:0,96,1177	0/0:27,0:27:81.23:0,81,970	0/0:15,0:15:42.08:0,42,490	0/0:32,0:32:96.26:0,96,1160	0/0:36,0:36:99:0,108,1325	0/0:33,0:33:99:0,99,1223	0/0:15,0:15:45.14:0,45,557	0/0:28,0:28:84.21:0,84,1002	0/0:47,0:47:99:0,138,1655	0/0:16,0:16:42.09:0,42,493	0/0:15,0:15:45.10:0,45,530	0/0:18,0:18:51.06:0,51,594	0/0:48,0:48:99:0,144,1784	0/0:26,0:26:75.05:0,75,886	0/0:16,0:16:45.07:0,45,514	0/0:48,0:48:99:0,144,1710	1/1:26,0:26:59.16:415,59,0	0/0:19,0:19:54.17:0,54,668	0/0:20,0:20:60.17:0,60,730	0/0:12,0:12:36.11:0,36,445
chr10	104791343	.	G	GA	2296.25	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-0.654;DP=748;FS=13.989;HRun=3;HaplotypeScore=75.9921;InbreedingCoeff=0.9973;MQ=86.20;MQ0=0;MQRankSum=-3.171;QD=29.44;ReadPosRankSum=1.646;VQSLOD=2.1368;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,1457	1/1:8,0:8:17.58:110,18,0	0/0:24,0:24:60.07:0,60,657	0/0:32,0:32:78.16:0,78,893	0/0:14,0:14:39.12:0,39,468	1/1:1,15:16:42.14:588,42,0	1/1:3,24:27:66.22:924,66,0	0/0:37,0:37:99:0,102,1206	0/0:32,0:32:93.29:0,93,1115	0/0:29,0:29:75.23:0,75,892	0/0:14,0:14:36.11:0,36,431	0/0:34,0:34:93.26:0,93,1101	0/0:38,0:38:99:0,105,1246	0/0:34,0:34:99:0,99,1186	0/0:15,0:15:45.14:0,45,540	0/0:28,0:28:78.21:0,78,912	0/0:47,0:47:99:0,129,1525	0/0:15,0:15:39.09:0,39,454	0/0:18,0:18:45.09:0,45,503	0/0:20,0:20:45.09:0,45,522	0/0:50,0:50:99:0,147,1750	0/0:25,0:25:69.19:0,69,812	0/0:17,0:17:36.11:0,36,432	0/0:51,0:51:99:0,144,1655	1/1:1,26:27:60.20:834,60,0	0/0:19,0:19:54.17:0,54,648	0/0:20,0:20:57.17:0,57,684	0/0:12,0:12:36.11:0,36,432
chr10	104808250	.	AAC	A	413.18	PASS	AB=1.000;AC=9;AF=0.173;AN=52;BaseQRankSum=3.782;DP=619;FS=2.432;HRun=0;HaplotypeScore=38.1059;InbreedingCoeff=0.6460;MQ=33.05;MQ0=283;MQRankSum=0.249;QD=5.04;ReadPosRankSum=-0.292;VQSLOD=2.1653;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:28:12.04:0,12,224	0/0:9,0:3:9.03:0,9,168	1/1:19,0:2:2.92:17,3,0	0/0:27,0:3:3:0,3,41	0/0:25,0:13:15.05:0,15,236	1/1:2,12:6:9.03:132,9,0	1/1:8,10:5:15.05:221,15,0	0/0:20,0:6:18.05:0,18,306	0/0:33,0:20:21.07:0,21,393	0/0:29,0:10:27.09:0,27,505	0/0:21,0:12:15.05:0,15,258	0/0:18,0:14:21.07:0,21,393	0/0:19,0:10:9.03:0,9,165	0/1:23,0:20:0.25:0,0,0	0/0:20,0:12:9.01:0,9,137	0/0:28,0:21:17.68:0,18,292	./.	0/0:13,0:7:3.01:0,3,56	0/0:16,0:3:9.03:0,9,168	0/0:20,0:9:27.09:0,27,504	./.	0/0:21,0:12:6.02:0,6,90	0/0:28,0:13:24.08:0,24,404	0/0:26,0:17:3.01:0,3,56	1/1:1,7:5:12.04:176,12,0	0/0:27,0:19:57.20:0,57,1068	0/0:25,0:4:9.03:0,9,147	0/0:14,0:9:0:0,0,0
chr10	104808788	.	A	AAAAAAAAAAAAAAG	2412.70	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=4.288;DP=303;FS=0.940;HRun=0;HaplotypeScore=105.6448;InbreedingCoeff=0.5728;MQ=57.56;MQ0=9;MQRankSum=-6.525;QD=33.05;ReadPosRankSum=-1.320;VQSLOD=2.8432;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:55.79:0,56,1372	0/0:7,0:7:21.04:0,21,500	0/0:22,0:7:14.29:0,14,230	0/0:19,0:12:16.67:0,17,168	0/0:10,0:10:20.89:0,21,628	1/1:2,1:13:9.03:509,9,0	1/1:4,0:2:6:115,6,0	0/1:20,0:10:57.95:58,0,64	0/0:8,0:8:24.07:0,24,734	0/0:7,0:6:18.05:0,18,572	0/0:11,0:11:32.93:0,33,809	0/0:3,0:3:9.03:0,9,327	0/0:5,0:5:15.03:0,15,400	0/0:8,0:7:18.03:0,18,424	0/0:13,0:13:39.13:0,39,1310	0/0:8,0:8:20.97:0,21,563	0/0:22,0:22:45.59:0,46,1619	0/0:7,0:7:21.04:0,21,459	0/1:16,0:13:23.57:683,0,24	./.	0/1:5,0:3:18.94:156,0,19	0/0:15,0:15:41.90:0,42,937	0/0:12,0:12:33.05:0,33,1008	0/0:12,0:12:33.11:0,33,973	1/1:3,0:3:9.03:390,9,0	0/0:6,0:6:18.03:0,18,405	1/1:10,0:8:18.04:659,18,0	0/0:10,0:10:23.86:0,24,783
chr10	104808804	.	GA	G	519.03	PASS	AB=0.636;AC=7;AF=0.130;AN=54;BaseQRankSum=3.499;DP=275;FS=0.000;HRun=9;HaplotypeScore=33.7693;InbreedingCoeff=0.6451;MQ=65.99;MQ0=9;MQRankSum=-2.513;QD=10.81;ReadPosRankSum=-2.664;VQSLOD=0.7405;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,1:19:24.03:0,24,514	0/0:6,0:6:12.03:0,12,130	0/0:27,0:12:23.92:0,24,224	0/0:20,0:12:5.06:0,5,109	0/0:6,0:6:15.04:0,15,170	0/0:12,0:12:11.98:0,12,115	0/0:5,0:3:6.02:0,6,69	1/1:6,16:11:8.88:201,9,0	0/0:7,0:7:21.06:0,21,242	0/0:8,0:7:21.06:0,21,242	0/0:10,0:10:21.06:0,21,240	0/0:3,0:3:9.03:0,9,104	0/0:3,0:3:9.03:0,9,104	0/0:6,0:5:15.04:0,15,173	0/0:12,0:12:33.10:0,33,381	0/0:7,0:7:21.06:0,21,242	0/0:20,0:20:57.17:0,57,657	0/0:7,0:7:18.05:0,18,208	1/1:5,12:13:36.02:329,36,0	./.	1/1:0,2:2:6:55,6,0	0/0:10,0:10:24.07:0,24,277	0/0:11,0:11:33.10:0,33,381	0/0:8,0:8:18.05:0,18,207	0/0:2,0:2:6.02:0,6,69	0/0:4,0:4:12.04:0,12,138	0/1:3,4:5:10.23:68,0,10	0/0:11,0:11:24.07:0,24,277
chr10	104808856	.	CAATA	C	670.93	PASS	AB=0.742;AC=19;AF=0.792;AN=24;BaseQRankSum=1.832;DP=163;FS=1.596;HRun=0;HaplotypeScore=26.6174;InbreedingCoeff=0.2919;MQ=51.87;MQ0=13;MQRankSum=0.377;QD=8.39;ReadPosRankSum=-2.156;VQSLOD=1.4777;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,1:10:6.02:93,6,0	./.	./.	./.	./.	0/0:9,0:9:12:0,12,229	./.	./.	1/1:4,2:6:3.01:46,3,0	1/1:3,0:3:3.01:46,3,0	1/1:3,1:4:3.01:46,3,0	./.	./.	./.	./.	1/1:4,1:5:3.01:46,3,0	0/1:15,8:23:16.37:170,0,16	1/1:4,4:8:9.03:139,9,0	./.	./.	./.	./.	1/1:4,2:6:2.76:46,3,0	1/1:1,0:1:3.01:46,3,0	0/0:6,0:6:12.04:0,12,265	./.	./.	1/1:7,7:14:6.02:93,6,0
chr10	104817129	.	AAG	A	354.79	PASS	AB=0.973;AC=17;AF=0.315;AN=54;BaseQRankSum=4.253;DP=490;FS=2.107;HRun=0;HaplotypeScore=56.5972;InbreedingCoeff=0.2189;MQ=33.20;MQ0=94;MQRankSum=-3.694;QD=1.42;ReadPosRankSum=-5.761;VQSLOD=-0.3307;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:26:28.77:29,0,117	0/0:12,0:10:29.83:0,30,219	./.	0/1:6,0:2:0.31:0,0,0	0/0:24,0:22:13.16:0,13,91	0/1:11,0:7:14.04:14,0,33	0/0:13,0:8:5.93:0,6,41	1/1:25,1:8:10.76:41,11,0	0/0:19,2:18:11.74:0,12,82	0/1:24,6:21:85.36:85,0,184	0/1:22,1:21:19.45:19,0,164	0/0:7,0:6:11.71:0,12,78	0/1:10,0:10:10.90:11,0,67	0/0:19,0:18:23.67:0,24,174	0/0:9,0:8:2.57:0,3,75	0/0:8,0:7:11.90:0,12,87	0/0:30,0:20:8.66:0,9,172	0/1:26,1:11:35.76:36,0,105	1/1:7,0:5:10.37:40,10,0	1/1:22,1:19:27.43:140,27,0	0/1:13,0:10:0.94:8,0,1	0/0:24,0:20:8.84:0,9,198	0/0:15,0:13:20.65:0,21,151	0/1:29,0:16:23.69:24,0,111	0/0:18,0:14:9.13:0,9,109	0/0:19,0:15:1.46:0,1,165	1/1:15,0:15:17.29:73,17,0	0/0:15,0:7:11.94:0,12,113
chr10	104817216	.	AAAC	A	3137.20	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=6.712;DP=606;FS=1.460;HRun=0;HaplotypeScore=89.8602;InbreedingCoeff=0.9068;MQ=61.25;MQ0=21;MQRankSum=-1.821;QD=24.51;ReadPosRankSum=-1.842;VQSLOD=3.3675;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,1:42:99:0,120,1771	0/0:14,0:14:39.09:0,39,604	0/0:21,0:12:24.11:0,24,519	0/1:11,0:8:2.93:3,0,210	0/0:27,0:26:60.20:0,60,945	0/0:18,0:17:48.16:0,48,760	0/0:14,0:13:27.09:0,27,467	1/1:8,25:30:69.23:1052,69,0	0/0:19,0:19:51.17:0,51,765	0/0:35,0:32:89.15:0,89,1406	0/0:24,0:23:69.01:0,69,1031	0/0:16,0:16:48.15:0,48,765	0/0:14,0:14:42.13:0,42,644	0/0:20,0:19:54.18:0,54,815	0/0:19,0:19:57.19:0,57,922	0/0:8,0:8:24.08:0,24,371	0/0:36,1:33:90.17:0,90,1390	0/0:29,1:27:34.74:0,35,1057	1/1:1,21:21:57.19:828,57,0	1/1:17,7:24:63.20:887,63,0	1/1:16,1:15:30.10:428,30,0	0/0:23,0:22:57.14:0,57,891	0/0:24,0:24:24.26:0,24,967	0/0:20,0:17:45.12:0,45,664	0/0:22,0:21:54.13:0,54,857	0/0:19,0:17:49.01:0,49,771	1/1:1,20:20:8.69:112,9,0	0/0:11,0:10:27.09:0,27,450
chr10	104818743	.	C	CAA	2012.64	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-3.391;DP=447;FS=1.118;HRun=10;HaplotypeScore=55.6627;InbreedingCoeff=0.9507;MQ=60.44;MQ0=4;MQRankSum=-1.569;QD=25.16;ReadPosRankSum=-0.490;VQSLOD=3.0435;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:53.56:0,54,683	0/0:7,0:7:18.02:0,18,182	0/0:4,0:4:11.96:0,12,107	0/0:10,0:8:16.65:0,17,130	0/0:28,0:28:60.06:0,60,610	0/0:17,0:17:42.07:0,42,427	0/0:20,0:20:42.05:0,42,427	1/1:7,3:16:30.06:328,30,0	0/0:18,0:18:39.02:0,39,396	0/0:23,0:21:51.09:0,51,515	0/0:7,0:7:15:0,15,153	0/0:15,0:15:38.82:0,39,378	0/0:12,0:12:33.06:0,33,329	0/0:17,0:17:47.99:0,48,474	0/0:17,0:17:39:0,39,449	0/0:8,0:7:21.05:0,21,214	0/0:36,0:36:90.15:0,90,908	0/0:14,0:16:32.26:0,32,280	1/1:5,11:17:38.61:529,39,0	1/1:3,9:13:29.59:410,30,0	1/1:5,0:12:12.02:114,12,0	0/0:13,0:13:33.07:0,33,336	0/0:4,0:3:6.01:0,6,61	0/0:18,0:17:39.05:0,39,386	0/0:20,0:20:48.10:0,48,488	0/0:21,0:22:50.80:0,51,500	1/1:0,20:20:54.18:805,54,0	0/0:6,0:6:18.04:0,18,183
chr10	104818904	.	TTTCC	T	1984.29	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.270;DP=596;FS=3.448;HRun=0;HaplotypeScore=100.3390;InbreedingCoeff=0.8739;MQ=71.85;MQ0=3;MQRankSum=2.396;QD=17.11;ReadPosRankSum=-1.148;VQSLOD=3.3041;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:80.86:0,81,1737	0/0:6,0:6:15.05:0,15,340	0/0:21,0:17:11.99:0,12,177	0/0:22,0:16:5.78:0,6,94	0/0:16,0:16:27.09:0,27,627	0/0:8,0:15:1.37:0,1,134	0/0:24,0:24:29.51:0,30,339	1/1:19,11:28:33.06:417,33,0	0/0:22,0:22:45.14:0,45,979	0/0:18,0:17:18.06:0,18,402	0/0:13,0:13:21.06:0,21,432	0/0:21,0:21:39.13:0,39,889	0/0:18,0:18:42.13:0,42,929	0/0:23,0:23:51.17:0,51,1156	0/0:16,0:16:33.11:0,33,791	0/0:11,0:11:24.08:0,24,535	0/0:29,0:29:48.16:0,48,1150	0/0:19,0:19:39.10:0,39,863	1/1:10,11:21:33.10:498,33,0	1/1:3,9:12:29.89:340,30,0	1/1:12,24:36:45.15:718,45,0	0/0:21,0:21:3.74:0,4,744	0/0:17,0:17:36.02:0,36,610	0/0:38,0:37:81.13:0,81,1595	0/0:18,0:26:29.99:0,30,365	0/0:21,0:21:45.11:0,45,1012	1/1:7,10:16:11.87:181,12,0	0/0:22,0:22:39.12:0,39,803
chr10	104820815	.	TTGGACGGAGTCATTC	T	2677.15	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=7.562;DP=657;FS=0.000;HRun=0;HaplotypeScore=118.7988;InbreedingCoeff=0.8549;MQ=37.96;MQ0=115;MQRankSum=-7.284;QD=42.49;ReadPosRankSum=1.182;VQSLOD=3.0499;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:24:39.13:0,39,2715	0/0:10,0:9:11.71:0,12,692	0/0:36,0:1:3.01:0,3,115	./.	0/0:39,0:25:42.12:0,42,2684	0/0:21,0:14:15.05:0,15,858	0/0:21,0:11:24.04:0,24,1171	./.	0/0:38,0:28:33.11:0,33,2122	0/0:36,0:24:66.23:0,66,4638	0/0:23,0:16:32.85:0,33,2149	0/0:30,0:22:29.61:0,30,1893	0/0:24,0:15:15.40:0,15,1123	0/0:24,0:16:24.08:0,24,1220	0/0:23,0:17:30.10:0,30,1970	0/0:16,0:13:27.05:0,27,1259	0/0:33,0:25:21.05:0,21,1299	0/0:30,0:22:27.02:0,27,1665	1/1:4,5:2:6.02:273,6,0	1/1:3,10:9:12.04:448,12,0	1/1:5,13:12:18.06:820,18,0	0/0:19,0:13:18.05:0,18,1040	0/0:41,0:30:45.11:0,45,2960	0/0:11,0:8:12.02:0,12,702	0/0:17,0:16:26.87:0,27,2001	0/0:30,0:21:63.19:0,63,4278	1/1:10,13:13:30.10:1283,30,0	0/0:6,0:4:6.02:0,6,314
chr10	104824836	.	T	TCTC	483.87	PASS	AB=0.906;AC=5;AF=0.089;AN=56;BaseQRankSum=7.362;DP=372;FS=8.906;HRun=0;HaplotypeScore=64.2518;InbreedingCoeff=-0.1115;MQ=64.03;MQ0=1;MQRankSum=-2.714;QD=6.28;ReadPosRankSum=-1.303;VQSLOD=0.7265;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.22:0,78,1149	0/0:1,0:1:3.01:0,3,49	0/0:21,0:13:13.88:0,14,281	0/0:6,0:5:9.02:0,9,101	0/0:10,0:10:24.08:0,24,390	0/0:4,0:4:12.04:0,12,193	0/0:24,0:24:69.21:0,69,1049	0/1:16,0:14:99:151,0,124	0/0:10,0:10:30.05:0,30,457	0/0:7,0:7:21:0,21,311	0/0:7,0:7:21.01:0,21,267	0/0:14,0:14:36.08:0,36,544	0/0:7,0:7:18.05:0,18,271	0/0:15,0:15:39.12:0,39,601	0/0:15,0:15:42.10:0,42,585	0/0:16,0:16:42.13:0,42,663	0/0:23,0:23:60.20:0,60,947	0/0:16,0:16:48.15:0,48,755	0/1:15,0:12:16.53:17,0,315	0/1:6,4:11:99:104,0,172	0/1:17,1:18:72.12:72,0,255	0/0:7,0:7:21.07:0,21,340	0/0:7,0:7:18.05:0,18,260	0/0:20,0:20:57.18:0,57,885	0/0:18,0:17:48.13:0,48,700	0/0:10,0:10:21.07:0,21,342	0/1:15,2:15:99:257,0,197	0/0:9,0:9:15.05:0,15,235
chr10	104824853	.	TG	T	239.11	PASS	AB=0.869;AC=5;AF=0.089;AN=56;BaseQRankSum=6.779;DP=417;FS=2.166;HRun=1;HaplotypeScore=59.3201;InbreedingCoeff=-0.1075;MQ=63.75;MQ0=1;MQRankSum=-5.837;QD=3.07;ReadPosRankSum=0.488;VQSLOD=-0.2177;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:93.70:0,94,1496	0/0:1,0:1:3.01:0,3,48	0/0:19,1:14:13.44:0,13,458	0/0:8,0:6:12.04:0,12,184	0/0:13,0:13:33.11:0,33,524	0/0:8,0:8:24.08:0,24,383	0/0:24,0:24:69.19:0,69,1050	0/1:16,2:17:32.44:32,0,641	0/0:11,0:11:30.10:0,30,479	0/0:15,0:14:39.13:0,39,622	0/0:10,0:10:21.01:0,21,334	0/0:15,0:15:45.15:0,45,714	0/0:11,0:11:30.08:0,30,446	0/0:16,0:16:42.14:0,42,660	0/0:8,0:8:24.08:0,24,383	0/0:17,0:17:51.17:0,51,811	0/0:21,0:21:57.19:0,57,902	0/0:20,0:20:57.19:0,57,898	0/1:9,1:10:14.69:15,0,329	0/1:10,2:12:50.28:50,0,396	0/1:20,2:22:86.58:87,0,406	0/0:12,0:12:27.09:0,27,431	0/0:8,0:8:21.06:0,21,311	0/0:26,0:26:75.26:0,75,1189	0/0:17,0:16:48.16:0,48,764	0/0:13,0:13:39.13:0,39,622	0/1:11,5:16:99:171,0,425	0/0:10,0:10:23.57:0,24,359
chr10	104826621	.	T	TG	2634.08	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-3.713;DP=537;FS=4.348;HRun=5;HaplotypeScore=64.2173;InbreedingCoeff=0.9952;MQ=64.70;MQ0=4;MQRankSum=-0.994;QD=30.63;ReadPosRankSum=-4.516;VQSLOD=2.1258;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:81.14:0,81,843	0/0:7,0:7:18.05:0,18,193	0/0:33,0:17:28.35:0,28,271	0/0:55,0:22:19.51:0,20,338	0/0:18,0:18:45.10:0,45,476	0/0:16,0:16:33.05:0,33,338	0/0:13,0:13:29.93:0,30,289	1/1:1,27:28:75.19:940,75,0	0/0:12,0:12:33.08:0,33,354	0/0:17,0:17:51.13:0,51,548	0/0:11,0:11:24.06:0,24,258	0/0:14,0:14:36.09:0,36,386	0/0:14,0:14:33.08:0,33,354	0/0:13,0:13:39.04:0,39,393	0/0:26,0:26:69.16:0,69,734	0/0:19,0:19:54.14:0,54,580	0/0:24,0:24:68.50:0,69,706	0/0:32,0:32:87.21:0,87,927	1/1:3,12:15:39.12:500,39,0	1/1:2,10:12:33.11:433,33,0	1/1:7,11:18:36.05:437,36,0	0/0:16,0:16:42.08:0,42,436	0/0:15,0:15:42.10:0,42,445	0/0:17,0:17:45.11:0,45,483	0/0:22,0:22:54.14:0,54,580	0/0:17,0:17:48.10:0,48,501	1/1:1,12:13:39.11:498,39,0	0/0:8,0:8:24.06:0,24,258
chr10	104826655	.	GT	G	1469.38	PASS	AB=0.894;AC=12;AF=0.214;AN=56;BaseQRankSum=4.454;DP=575;FS=0.973;HRun=11;HaplotypeScore=72.3127;InbreedingCoeff=0.7662;MQ=72.74;MQ0=11;MQRankSum=-2.590;QD=8.16;ReadPosRankSum=-2.796;VQSLOD=1.9206;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,4:33:4.23:0,4,630	0/0:1,0:5:11.40:0,11,57	0/0:54,0:18:14.71:0,15,97	0/1:84,0:27:8.95:9,0,117	0/0:19,0:20:33.83:0,34,443	0/0:1,0:18:34.16:0,34,171	0/0:8,0:21:40.91:0,41,232	1/1:10,9:19:44.91:362,45,0	0/0:16,1:17:20.47:0,20,416	0/0:18,0:18:45.07:0,45,454	0/0:13,0:13:39.08:0,39,408	0/0:13,0:13:33.08:0,33,346	0/0:10,0:10:27.06:0,27,282	0/0:15,0:15:39.06:0,39,392	0/0:15,0:16:44.95:0,45,446	0/0:18,0:18:42.11:0,42,447	0/0:22,0:22:54.09:0,54,552	0/0:25,0:25:63.07:0,63,634	1/1:4,10:14:29.89:234,30,0	1/1:4,18:22:53.46:423,53,0	1/1:4,8:13:22.91:178,23,0	0/0:9,0:9:24.06:0,24,256	0/0:19,0:19:48.05:0,48,485	0/0:12,0:12:29.81:0,30,300	0/0:1,0:16:36.96:0,37,186	0/0:21,0:21:51.11:0,51,536	1/1:2,19:22:55.01:430,55,0	0/1:3,1:4:12.60:13,0,74
chr10	104828532	.	CTG	C	1000.25	PASS	AB=0.686;AC=6;AF=0.107;AN=56;BaseQRankSum=9.106;DP=580;FS=43.520;HRun=0;HaplotypeScore=91.0500;InbreedingCoeff=0.2351;MQ=65.88;MQ0=8;MQRankSum=-6.930;QD=14.29;ReadPosRankSum=-2.611;VQSLOD=1.4380;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:99:0,111,2188	0/0:10,0:9:24.07:0,24,451	0/0:17,0:14:36.39:0,36,712	0/0:26,0:22:59.79:0,60,1144	0/0:21,0:21:51.15:0,51,963	0/0:26,0:26:69.22:0,69,1365	0/0:13,0:13:39.12:0,39,734	0/1:3,8:10:38.14:204,0,38	0/0:28,0:28:84.21:0,84,1572	0/0:22,0:22:66.21:0,66,1222	0/0:11,0:11:33.11:0,33,670	0/0:26,0:24:72.25:0,72,1441	0/0:16,0:16:45.11:0,45,873	0/0:31,0:31:90.31:0,90,1823	0/0:17,0:17:48.16:0,48,975	0/0:20,0:20:57.18:0,57,1107	0/0:46,0:45:99:0,126,2480	0/0:26,0:26:78.24:0,78,1495	0/1:10,3:11:64.81:65,0,165	0/1:12,10:22:99:342,0,492	1/1:1,7:8:12.04:172,12,0	0/0:13,0:13:39.13:0,39,777	0/0:13,0:13:39.13:0,39,789	0/0:32,0:32:90.31:0,90,1804	0/0:20,0:20:57.20:0,57,1157	0/0:22,0:20:60.16:0,60,1158	0/1:8,7:16:99:344,0,322	0/0:10,0:10:24.08:0,24,484
chr10	104828558	.	TTA	T	661.54	PASS	AB=0.664;AC=7;AF=0.125;AN=56;BaseQRankSum=7.006;DP=547;FS=43.917;HRun=0;HaplotypeScore=86.4035;InbreedingCoeff=0.4761;MQ=47.37;MQ0=32;MQRankSum=-5.141;QD=11.81;ReadPosRankSum=0.973;VQSLOD=1.4643;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:46:99:0,117,2237	0/0:13,0:12:36.12:0,36,726	0/0:5,0:2:6.02:0,6,119	0/0:13,0:9:21.03:0,21,308	0/0:24,0:23:51.17:0,51,939	0/0:26,0:24:66.23:0,66,1333	0/0:15,0:15:45.11:0,45,847	1/1:4,3:4:6.02:98,6,0	0/0:22,0:22:66.23:0,66,1299	0/0:20,0:20:60.21:0,60,1219	0/0:13,0:13:33.11:0,33,618	0/0:24,0:21:63.22:0,63,1245	0/0:15,0:15:42.13:0,42,798	0/0:26,0:25:75.26:0,75,1513	0/0:17,0:16:48.16:0,48,967	0/0:14,0:13:36.10:0,36,678	0/0:46,0:40:99:0,99,1967	0/0:30,0:28:84.24:0,84,1640	1/1:6,1:4:3.01:49,3,0	0/1:12,6:18:99:153,0,549	0/1:2,4:5:0.43:44,0,0	0/0:12,0:12:33.03:0,33,581	0/0:16,0:15:42.13:0,42,766	0/0:34,0:33:93.27:0,93,1796	0/0:16,0:16:48.16:0,48,973	0/0:27,0:24:72.24:0,72,1397	0/1:8,10:17:99:443,0,237	0/0:15,0:14:33.11:0,33,667
chr10	104828655	.	CTCTTT	C	762.34	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=6.392;DP=488;FS=34.743;HRun=0;HaplotypeScore=81.9786;InbreedingCoeff=0.9211;MQ=59.43;MQ0=16;MQRankSum=-6.527;QD=31.76;ReadPosRankSum=-3.430;VQSLOD=1.2998;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:21.03:0,21,1763	0/0:11,0:11:33.10:0,33,994	0/0:20,0:10:30.03:0,30,758	0/0:28,0:8:21.07:0,21,495	0/0:15,0:15:45.15:0,45,1451	0/0:16,0:15:45.15:0,45,1397	0/0:20,0:20:57.19:0,57,1677	1/1:1,5:5:15.01:287,15,0	0/0:22,0:22:63.22:0,63,1952	0/0:25,0:25:75.26:0,75,2420	0/0:18,0:18:51.18:0,51,1602	0/0:17,0:17:48.16:0,48,1514	0/0:11,0:11:33.11:0,33,1029	0/0:23,0:21:63.22:0,63,2015	0/0:23,0:23:69.24:0,69,2175	0/0:16,0:16:45.15:0,45,1432	0/0:32,0:32:96.33:0,96,3069	0/0:27,0:27:72.25:0,72,2323	1/1:2,4:5:9.03:200,9,0	1/1:1,8:8:18.06:400,18,0	./.	0/0:22,0:21:60.21:0,60,1881	0/0:17,0:17:51.18:0,51,1591	0/0:13,0:13:39.13:0,39,1236	0/0:21,0:21:63.21:0,63,1944	0/0:26,0:25:72.24:0,72,2206	1/1:2,1:2:2.94:18,3,0	0/0:12,0:12:27.09:0,27,870
chr10	104829960	.	GAAAGAA	G	2393.20	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.133;DP=615;FS=2.779;HRun=0;HaplotypeScore=150.1927;InbreedingCoeff=0.9627;MQ=66.09;MQ0=4;MQRankSum=-8.605;QD=31.08;ReadPosRankSum=-0.923;VQSLOD=3.0518;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,3281	0/0:8,0:8:21.07:0,21,634	0/0:41,0:25:58.85:0,59,1309	0/0:34,0:22:49.87:0,50,961	0/0:26,0:26:72.24:0,72,2340	0/0:28,0:28:75.22:0,75,1859	0/0:32,0:31:90.31:0,90,2306	1/1:1,9:10:23.97:326,24,0	0/0:24,0:24:72.25:0,72,2385	0/0:21,0:21:63.22:0,63,2124	0/0:20,0:20:60.19:0,60,1896	0/0:20,0:20:60.21:0,60,1998	0/0:17,0:17:51.16:0,51,1538	0/0:23,0:23:69.19:0,69,2296	0/0:17,0:17:51.15:0,51,1448	0/0:16,0:16:48.16:0,48,1685	0/0:33,0:33:99:0,99,3283	0/0:24,0:24:72.23:0,72,2249	1/1:2,16:18:8.99:563,9,0	1/1:1,16:17:21.07:475,21,0	1/1:1,12:13:7.43:208,7,0	0/0:27,0:27:81.27:0,81,2489	0/0:14,0:14:42.13:0,42,1226	0/0:29,0:29:84.29:0,84,2943	0/0:22,0:22:66.23:0,66,1652	0/0:21,0:21:63.20:0,63,1939	1/1:0,19:19:42.14:988,42,0	0/0:6,0:6:18.06:0,18,581
chr10	104829970	.	AAG	A	1913.51	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.154;DP=613;FS=2.512;HRun=0;HaplotypeScore=106.5415;InbreedingCoeff=0.7886;MQ=66.34;MQ0=5;MQRankSum=-2.243;QD=19.14;ReadPosRankSum=0.105;VQSLOD=3.5930;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.29:0,87,1398	0/0:6,0:6:18.06:0,18,289	0/0:39,0:22:18.50:0,19,312	0/0:42,0:27:39.62:0,40,591	0/0:25,0:25:63.21:0,63,989	1/1:0,28:28:69.22:849,69,0	1/1:11,19:29:24.23:530,24,0	0/0:9,0:9:3.17:0,3,8	0/0:23,0:23:57.19:0,57,923	0/0:20,1:21:20.25:0,20,824	0/0:19,0:19:51.16:0,51,807	0/0:19,0:19:45.15:0,45,730	0/0:16,0:16:36.11:0,36,562	0/0:24,0:24:63.21:0,63,1018	0/0:14,0:14:33.11:0,33,535	0/0:16,0:16:39.13:0,39,629	0/0:33,0:33:78.27:0,78,1261	0/0:25,0:25:63.16:0,63,980	0/0:17,0:17:14.76:0,15,93	1/1:17,0:17:3.62:18,4,0	0/0:16,0:16:1.57:0,2,14	0/0:25,0:25:48.16:0,48,776	0/0:13,0:13:39.13:0,39,625	0/0:35,0:35:93.29:0,93,1454	1/1:2,23:25:54.17:665,54,0	0/0:16,1:18:11.22:0,11,664	0/0:21,0:21:0.49:0,0,28	0/0:6,0:6:18.06:0,18,294
chr10	104830090	.	TGGGGG	T	1601.15	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.555;DP=407;FS=0.683;HRun=14;HaplotypeScore=99.3736;InbreedingCoeff=0.6126;MQ=89.12;MQ0=4;MQRankSum=-3.042;QD=28.09;ReadPosRankSum=4.386;VQSLOD=2.7286;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:10:10.59:0,11,185	0/0:5,0:6:3.01:0,3,31	0/0:52,0:32:42.83:0,43,806	0/0:32,0:19:32.67:0,33,504	0/0:7,0:7:3.01:0,3,42	1/1:4,22:26:54.11:895,54,0	1/1:4,19:24:42.13:662,42,0	0/0:14,0:14:23.56:0,24,413	0/0:5,0:6:3.01:0,3,79	0/0:8,0:8:3.01:0,3,72	0/0:8,0:9:6.02:0,6,132	0/0:9,0:9:9.03:0,9,146	0/0:9,0:10:15.05:0,15,254	0/0:10,0:10:12.04:0,12,193	0/0:10,0:10:12.03:0,12,169	0/0:7,0:7:15.05:0,15,238	0/0:18,0:23:18.06:0,18,268	0/0:7,0:8:9.03:0,9,149	0/0:16,0:16:34.36:0,34,683	0/0:18,0:18:48.16:0,48,924	0/0:23,0:23:54.12:0,54,1063	0/0:10,0:10:3.01:0,3,72	0/0:10,0:13:15.01:0,15,229	0/0:5,0:8:9.92:0,10,146	1/1:2,4:7:12.01:179,12,0	0/0:15,0:15:0:0,0,0	0/0:16,0:16:44.51:0,45,833	0/0:6,0:6:6.02:0,6,96
chr10	104830213	.	GAAC	G	4454.82	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.140;DP=542;FS=1.916;HRun=0;HaplotypeScore=84.6227;InbreedingCoeff=0.9986;MQ=100.66;MQ0=0;MQRankSum=-2.834;QD=36.82;ReadPosRankSum=1.634;VQSLOD=5.7500;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,2215	0/0:7,0:7:21.07:0,21,464	0/0:33,0:33:87.30:0,87,1871	0/0:30,0:30:78.22:0,78,1645	0/0:20,0:20:54.17:0,54,1132	0/0:30,0:30:78.27:0,78,1684	0/0:11,0:11:33.11:0,33,700	1/1:2,21:23:48.14:725,48,0	0/0:16,0:16:45.15:0,45,993	0/0:26,0:26:78.26:0,78,1632	0/0:14,0:14:42.14:0,42,900	0/0:19,0:19:54.19:0,54,1190	0/0:15,0:15:39.13:0,39,858	0/0:12,0:12:33.11:0,33,728	0/0:24,0:24:72.25:0,72,1589	0/0:16,0:16:48.16:0,48,1060	0/0:17,0:17:45.15:0,45,979	0/0:15,0:15:39.13:0,39,834	1/1:3,20:23:57.13:839,57,0	1/1:2,22:23:57.19:915,57,0	1/1:1,24:25:63.21:1012,63,0	0/0:15,0:15:45.15:0,45,992	0/0:12,0:12:30.10:0,30,662	0/0:12,0:12:33.11:0,33,710	0/0:15,0:15:42.14:0,42,927	0/0:17,0:17:48.16:0,48,1047	1/1:2,24:26:60.20:963,60,0	0/0:10,0:10:30.10:0,30,662
chr10	104831819	.	GA	G	80.64	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.480;DP=529;FS=3.682;HRun=1;HaplotypeScore=62.7728;InbreedingCoeff=0.7240;MQ=47.65;MQ0=98;MQRankSum=-3.090;QD=13.44;ReadPosRankSum=-3.001;VQSLOD=1.6707;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:23:51.17:0,51,812	0/0:12,0:9:21.07:0,21,335	0/0:31,0:4:8.83:0,9,73	0/0:24,0:6:4.69:0,5,110	0/0:24,0:19:36.12:0,36,572	1/1:0,3:2:6.02:74,6,0	1/1:0,2:2:6.02:83,6,0	0/0:18,0:15:42.07:0,42,617	0/0:29,0:28:63.21:0,63,990	0/0:23,0:21:63.21:0,63,1006	0/0:21,0:19:33.11:0,33,520	0/0:18,0:17:42.06:0,42,636	0/0:18,0:16:33.10:0,33,501	0/0:29,0:24:46.95:0,47,763	0/0:17,0:16:33.11:0,33,526	0/0:22,0:20:60.19:0,60,925	0/0:35,0:31:51.17:0,51,807	0/0:17,0:10:18.06:0,18,288	0/0:8,0:6:18.06:0,18,271	0/0:12,0:12:33.11:0,33,514	0/0:18,0:16:39.12:0,39,623	0/0:17,0:15:33.10:0,33,503	0/0:14,0:11:24.07:0,24,357	0/0:36,0:34:69.19:0,69,1070	1/1:0,1:1:3.01:37,3,0	0/0:28,0:19:48.66:0,49,811	0/0:22,0:21:54.18:0,54,862	0/0:4,0:3:3.01:0,3,48
chr10	104832000	.	G	GGAAAGAAA	678.85	PASS	AB=1.000;AC=7;AF=0.350;AN=20;BaseQRankSum=1.439;DP=333;FS=0.000;HRun=0;HaplotypeScore=40.0527;InbreedingCoeff=0.4263;MQ=23.68;MQ0=217;MQRankSum=-0.805;QD=10.78;ReadPosRankSum=-0.659;VQSLOD=1.1455;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:3:19.19:19,0,34	1/1:3,6:8:6.01:217,6,0	./.	./.	./.	./.	./.	./.	0/0:16,0:6:3.01:0,3,76	0/0:16,0:9:14.97:0,15,228	0/0:13,0:7:4.51:0,5,23	./.	./.	0/0:19,0:5:3.01:0,3,76	./.	./.	./.	./.	./.	1/1:23,0:13:21:390,21,0	./.	0/0:16,0:10:3.01:0,3,76	./.	./.	./.	0/0:21,0:5:12.02:0,12,250	1/1:11,0:5:6.02:153,6,0	./.
chr10	104832069	.	A	AGGAG	423.71	PASS	AB=1.000;AC=3;AF=0.150;AN=20;BaseQRankSum=-0.359;DP=349;FS=0.000;HRun=0;HaplotypeScore=44.6302;InbreedingCoeff=0.4492;MQ=49.78;MQ0=251;MQRankSum=0.548;QD=14.12;ReadPosRankSum=0.586;VQSLOD=2.8134;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:3:2.98:0,3,21	0/0:8,0:4:6.02:0,6,102	0/0:29,0:10:5.95:0,6,25	0/0:32,0:6:1.82:0,2,43	./.	./.	./.	./.	./.	0/0:16,0:5:15.04:0,15,233	0/0:17,0:11:8.94:0,9,91	./.	./.	./.	./.	./.	./.	./.	./.	1/1:11,6:11:24.01:505,24,0	./.	0/0:12,0:6:3.01:0,3,52	0/1:13,0:8:0.01:0,0,0	./.	./.	0/0:26,0:7:21.07:0,21,357	./.	./.
chr10	104832136	.	GGA	G	267.86	PASS	AC=2;AF=0.167;AN=12;BaseQRankSum=-1.016;DP=367;FS=3.136;HRun=0;HaplotypeScore=25.2216;MQ=43.01;MQ0=309;MQRankSum=-0.831;QD=12.18;ReadPosRankSum=-0.339;VQSLOD=2.5727;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:2:6.02:0,6,101	0/0:25,0:6:4.34:0,4,52	0/0:28,0:6:11.34:0,11,105	./.	./.	./.	./.	./.	0/0:25,0:3:9.03:0,9,153	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:9,13:11:27.09:347,27,0	./.	./.	./.	./.	./.	0/0:11,0:1:3.01:0,3,40	./.	./.
chr10	104833118	.	TGGTA	T	1023.88	PASS	AC=14;AF=0.269;AN=52;BaseQRankSum=5.349;DP=407;FS=13.637;HRun=0;HaplotypeScore=38.9595;InbreedingCoeff=0.7313;MQ=28.46;MQ0=225;MQRankSum=-2.728;QD=12.64;ReadPosRankSum=2.400;VQSLOD=0.7280;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:25:54.19:0,54,1331	0/0:5,0:2:6.02:0,6,152	./.	0/0:11,0:3:9.03:0,9,194	0/0:11,0:3:6.02:0,6,73	1/1:5,4:5:6.02:104,6,0	1/1:4,14:12:30.10:521,30,0	1/1:6,4:8:12.04:197,12,0	0/0:27,0:9:18.06:0,18,415	0/0:14,0:2:3.01:0,3,76	0/0:11,0:1:3.01:0,3,56	0/0:19,0:10:24.08:0,24,488	0/0:19,0:8:15.05:0,15,375	0/0:21,0:13:33.11:0,33,665	0/0:15,0:11:12.04:0,12,263	0/0:15,0:5:12.04:0,12,245	0/0:18,0:7:18.06:0,18,395	0/0:21,0:9:21.07:0,21,533	1/1:7,3:6:6.02:104,6,0	1/1:0,8:3:3.01:52,3,0	1/1:3,14:7:8.95:156,9,0	0/0:16,0:6:18.06:0,18,334	0/0:10,0:6:15.05:0,15,301	0/0:18,0:7:18.06:0,18,455	./.	0/0:18,0:6:12.04:0,12,305	1/1:3,6:2:3.01:52,3,0	0/0:5,0:4:12.04:0,12,304
chr10	104836845	.	CTTAG	C	2374.79	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.318;DP=651;FS=4.496;HRun=0;HaplotypeScore=113.9653;InbreedingCoeff=0.9970;MQ=89.47;MQ0=0;MQRankSum=-4.382;QD=38.93;ReadPosRankSum=1.429;VQSLOD=4.0494;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,3439	0/0:7,0:7:21.07:0,21,560	0/0:27,0:27:60.21:0,60,1487	0/0:26,0:26:73.14:0,73,1646	0/0:31,0:31:90.31:0,90,2371	1/1:1,23:24:48.16:895,48,0	1/1:4,15:19:33.11:615,33,0	0/0:22,0:22:54.18:0,54,1354	0/0:28,0:28:81.28:0,81,2147	0/0:32,0:32:81.27:0,81,2078	0/0:22,0:22:63.22:0,63,1680	0/0:16,0:16:48.16:0,48,1268	0/0:19,0:19:54.15:0,54,1381	0/0:14,0:14:36.12:0,36,904	0/0:21,0:21:60.21:0,60,1600	0/0:20,0:20:57.20:0,57,1497	0/0:35,0:35:99:0,102,2654	0/0:25,0:25:69.24:0,69,1825	0/0:23,0:23:69.21:0,69,1734	0/0:25,0:25:69.24:0,69,1806	0/0:21,0:21:60.21:0,60,1550	0/0:25,0:25:72.25:0,72,1909	0/0:21,0:21:60.21:0,60,1559	0/0:19,0:19:57.20:0,57,1471	1/1:0,18:18:54.19:1008,54,0	0/0:29,0:29:84.29:0,84,2198	0/0:32,0:32:90.31:0,90,2396	0/0:7,0:7:21.04:0,21,498
chr10	104839177	.	G	GC	620.79	PASS	AB=0.698;AC=3;AF=0.054;AN=56;BaseQRankSum=10.636;DP=696;FS=0.588;HRun=0;HaplotypeScore=89.3965;InbreedingCoeff=-0.0562;MQ=63.66;MQ0=1;MQRankSum=-9.209;QD=8.17;ReadPosRankSum=1.777;VQSLOD=3.7528;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:99:0,141,1905	0/0:7,0:7:18.06:0,18,251	0/0:33,0:32:68.78:0,69,1196	0/0:33,0:24:69.21:0,69,916	0/0:27,0:27:78.24:0,78,1072	0/1:15,16:31:46.40:361,0,46	0/1:16,7:23:99:133,0,100	0/0:27,0:27:78.24:0,78,1047	0/0:18,0:18:51.16:0,51,695	0/0:36,0:36:99:0,108,1509	0/0:10,0:10:30.10:0,30,419	0/0:24,0:24:69.23:0,69,965	0/0:21,0:21:60.13:0,60,814	0/0:29,0:29:81.26:0,81,1113	0/0:19,0:19:57.18:0,57,772	0/0:23,0:23:69:0,69,916	0/0:26,0:26:75.25:0,75,1047	0/0:18,0:18:54.18:0,54,754	0/0:28,0:28:84.26:0,84,1142	0/0:20,0:20:60.20:0,60,837	0/0:24,0:24:72.24:0,72,1006	0/0:17,0:17:48.13:0,48,635	0/0:22,0:22:66.22:0,66,920	0/0:33,0:33:99:0,99,1381	0/1:11,11:21:29.49:227,0,29	0/0:29,0:29:81.26:0,81,1116	0/0:37,0:37:99:0,108,1492	0/0:10,0:10:30.10:0,30,415
chr10	104839178	.	T	TTGC	1549.37	PASS	AB=0.717;AC=4;AF=0.071;AN=56;BaseQRankSum=11.256;DP=699;FS=5.233;HRun=0;HaplotypeScore=114.2912;InbreedingCoeff=0.4587;MQ=63.13;MQ0=1;MQRankSum=-7.802;QD=20.12;ReadPosRankSum=0.387;VQSLOD=3.1506;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:99:0,138,2298	0/0:7,0:7:21.06:0,21,342	0/0:33,0:32:70.07:0,70,1414	0/0:34,0:25:69.18:0,69,1092	0/0:27,0:27:78.25:0,78,1342	0/1:15,16:31:25.55:733,0,26	0/1:17,7:24:79.25:333,0,79	0/0:26,0:26:75.23:0,75,1200	0/0:17,0:17:51.16:0,51,861	0/0:36,0:36:99:0,108,1823	0/0:10,0:10:30.09:0,30,500	0/0:24,0:24:72.23:0,72,1238	0/0:21,0:21:63.20:0,63,1066	0/0:30,0:30:87.20:0,87,1388	0/0:20,0:20:57.10:0,57,916	0/0:23,0:23:66.20:0,66,1102	0/0:28,0:28:75.26:0,75,1319	0/0:18,0:18:54.18:0,54,950	0/0:28,0:28:84.27:0,84,1393	0/0:20,0:20:60.19:0,60,1025	0/0:24,0:24:72.25:0,72,1259	0/0:17,0:17:51.13:0,51,811	0/0:22,0:22:66.21:0,66,1127	0/0:33,0:33:99:0,99,1737	1/1:11,11:21:21.85:597,22,0	0/0:29,0:29:81.27:0,81,1398	0/0:37,0:37:99:0,108,1832	0/0:10,0:10:30.09:0,30,500
chr10	104839560	.	TG	T	2887.32	PASS	AB=0.981;AC=20;AF=0.357;AN=56;BaseQRankSum=8.537;DP=443;FS=0.422;HRun=9;HaplotypeScore=62.0057;InbreedingCoeff=0.8247;MQ=81.12;MQ0=2;MQRankSum=-1.618;QD=15.36;ReadPosRankSum=1.200;VQSLOD=3.7150;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,1:20:17.68:0,18,457	1/1:4,5:9:12:110,12,0	0/1:24,1:19:12.98:13,0,125	0/0:27,0:23:10.81:0,11,192	0/0:11,1:12:8.63:0,9,334	1/1:0,12:13:32.86:288,33,0	1/1:3,23:27:57.02:518,57,0	1/1:3,14:17:37.69:350,38,0	0/0:14,1:15:6.88:0,7,319	0/0:20,0:20:42.12:0,42,478	0/0:8,0:8:18.05:0,18,206	0/1:11,0:11:0.09:0,0,231	0/0:14,0:14:36.09:0,36,404	0/0:9,0:9:14.83:0,15,152	0/0:16,1:17:15.17:0,15,405	0/0:14,0:14:22.59:0,23,327	0/0:23,0:23:60.18:0,60,692	0/0:15,1:16:14.66:0,15,423	1/1:2,11:13:29.99:268,30,0	1/1:2,16:18:45.01:411,45,0	1/1:4,19:23:48.02:439,48,0	0/0:10,0:10:21.06:0,21,238	0/0:14,1:15:14.65:0,15,411	0/0:17,0:17:42.12:0,42,485	1/1:1,14:15:32.85:287,33,0	0/0:15,0:15:39.12:0,39,449	1/1:2,15:17:45.02:412,45,0	0/0:2,0:2:6.02:0,6,69
chr10	104840399	.	TC	T	2466.64	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=13.070;DP=678;FS=11.303;HRun=2;HaplotypeScore=74.5228;InbreedingCoeff=1.0000;MQ=89.53;MQ0=0;MQRankSum=-0.975;QD=34.74;ReadPosRankSum=1.547;VQSLOD=3.4164;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.27:0,84,1237	0/0:14,0:14:42.14:0,42,629	0/0:33,0:33:66.27:0,66,1203	0/0:27,0:27:78.23:0,78,1123	0/0:19,0:19:57.18:0,57,834	1/1:0,31:31:93.30:1207,93,0	1/1:0,20:20:54.18:701,54,0	0/0:31,0:31:87.28:0,87,1269	0/0:27,0:27:81.21:0,81,1130	0/0:27,0:27:78.25:0,78,1150	0/0:21,0:21:63.21:0,63,942	0/0:28,0:28:84.28:0,84,1258	0/0:22,0:22:66.22:0,66,989	0/0:18,0:18:54.18:0,54,808	0/0:27,0:27:81.27:0,81,1212	0/0:18,0:18:54.18:0,54,809	0/0:18,0:18:54.17:0,54,790	0/0:27,0:27:78.22:0,78,1119	0/0:24,0:24:72.23:0,72,1056	0/0:28,0:28:81.23:0,81,1188	0/0:35,0:35:99:0,105,1566	0/0:22,0:22:66.20:0,66,945	0/0:27,0:27:75.17:0,75,1040	0/0:23,0:23:66.22:0,66,989	1/1:0,20:20:54.18:701,54,0	0/0:25,0:25:72.24:0,72,1078	0/0:23,0:22:69.20:0,69,991	0/0:13,0:13:39.13:0,39,584
chr10	104840844	.	C	CAT	2718.39	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.319;DP=753;FS=0.000;HRun=0;HaplotypeScore=88.5063;InbreedingCoeff=0.9998;MQ=77.19;MQ0=0;MQRankSum=-1.755;QD=44.56;ReadPosRankSum=1.249;VQSLOD=5.0017;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,154,2443	0/0:11,0:11:33.11:0,33,528	0/0:21,0:21:60.20:0,60,971	0/0:28,0:28:81.23:0,81,1230	0/0:30,0:30:78.22:0,78,1223	1/1:0,22:23:54.19:1097,54,0	1/1:0,13:13:36.12:730,36,0	0/0:34,0:34:96.14:0,96,1421	0/0:23,0:23:68.97:0,69,1001	0/0:28,0:28:80.26:0,80,1220	0/0:20,0:20:60.20:0,60,974	0/0:17,0:17:45.15:0,45,720	0/0:23,0:23:63.22:0,63,1021	0/0:26,0:26:78.16:0,78,1140	0/0:27,0:27:75.24:0,75,1197	0/0:20,0:20:60.19:0,60,953	0/0:47,0:47:99:0,135,2072	0/0:20,0:20:51.17:0,51,819	0/0:19,0:19:57.15:0,57,895	0/0:37,0:37:96.33:0,96,1549	0/0:39,0:39:99:0,117,1860	0/0:28,0:28:84.29:0,84,1368	0/0:27,0:27:81.28:0,81,1288	0/0:33,0:33:99:0,99,1551	1/1:0,24:25:51.18:1035,51,0	0/0:30,0:30:84.28:0,84,1336	0/0:38,0:38:99:0,105,1691	0/0:13,0:13:39.13:0,39,621
chr10	104841292	.	GT	G	5562.58	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.720;DP=729;FS=6.488;HRun=2;HaplotypeScore=70.0977;InbreedingCoeff=1.0000;MQ=90.10;MQ0=0;MQRankSum=-1.269;QD=36.12;ReadPosRankSum=-1.866;VQSLOD=4.5379;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:50:99:0,153,2270	0/0:14,0:14:42.11:0,42,605	0/0:24,0:24:69.22:0,69,998	0/0:32,0:32:89.78:0,90,1262	0/0:25,0:25:75.24:0,75,1097	0/0:21,0:21:63.21:0,63,944	0/0:21,0:21:63.20:0,63,924	1/1:2,38:40:99:1448,114,0	0/0:18,0:18:54.17:0,54,790	0/0:31,0:31:93.31:0,93,1376	0/0:31,0:31:93.28:0,93,1325	0/0:24,0:24:72.24:0,72,1079	0/0:21,0:21:63.20:0,63,922	0/0:29,0:29:84.28:0,84,1258	0/0:36,0:36:99:0,102,1528	0/0:27,0:27:81.27:0,81,1213	0/0:26,0:25:75.24:0,75,1104	0/0:17,0:17:48.16:0,48,720	1/1:2,19:21:57.17:726,57,0	1/1:0,26:26:75.24:973,75,0	1/1:1,36:37:99:1325,102,0	0/0:25,0:25:75.25:0,75,1124	0/0:18,0:18:54.16:0,54,769	0/0:21,0:21:63.21:0,63,944	0/0:21,0:21:60.20:0,60,895	0/0:27,0:27:78.26:0,78,1149	1/1:0,30:30:84.27:1090,84,0	0/0:15,0:15:45.15:0,45,674
chr10	104841522	.	T	TACATC	1380.56	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.354;DP=801;FS=2.232;HRun=0;HaplotypeScore=164.4306;InbreedingCoeff=0.9502;MQ=60.09;MQ0=9;MQRankSum=2.710;QD=17.70;ReadPosRankSum=1.887;VQSLOD=3.6285;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:75.12:0,75,1461	0/0:15,0:15:21.07:0,21,334	0/0:27,0:19:54.16:0,54,834	0/0:23,0:15:41.62:0,42,633	0/0:31,0:31:84.29:0,84,1638	1/1:28,0:28:39.77:654,40,0	1/1:25,0:24:44.31:738,44,0	0/0:28,0:27:75.12:0,75,1059	0/0:33,0:33:93.30:0,93,1815	0/0:36,0:35:96.31:0,96,1800	0/0:31,0:31:75.26:0,75,1438	0/0:25,0:25:75.26:0,75,1452	0/0:31,0:31:84.27:0,84,1595	0/0:25,0:25:75.24:0,75,1351	0/0:35,0:35:99:0,99,1878	0/0:30,0:30:84.28:0,84,1573	0/0:25,0:25:68.04:0,68,1288	0/0:28,0:28:78.74:0,79,1457	0/0:20,0:19:44.45:0,44,642	0/0:34,0:34:51.17:0,51,818	0/0:37,0:37:42.10:0,42,621	0/0:39,0:39:99:0,117,2254	0/0:37,0:37:99:0,99,1927	0/0:14,0:14:42.14:0,42,760	1/1:4,20:24:4.79:123,5,0	0/0:37,0:37:99:0,105,1896	0/0:36,0:35:56.88:0,57,914	0/0:14,0:14:39.13:0,39,712
chr10	104841526	.	TA	T	1790.19	PASS	AB=0.955;AC=5;AF=0.089;AN=56;BaseQRankSum=9.205;DP=794;FS=0.000;HRun=1;HaplotypeScore=104.6322;InbreedingCoeff=0.7798;MQ=59.78;MQ0=11;MQRankSum=1.762;QD=25.21;ReadPosRankSum=1.202;VQSLOD=3.5113;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:75.26:0,75,1199	0/0:12,0:12:24.08:0,24,379	0/0:26,0:18:54.16:0,54,788	0/0:23,0:14:38.82:0,39,554	0/0:30,0:30:87.30:0,87,1391	1/1:0,27:27:75.25:1049,75,0	1/1:1,22:22:60.20:839,60,0	0/0:30,0:29:83.48:0,83,1197	0/0:32,0:32:96.33:0,96,1535	0/0:34,0:33:99:0,99,1555	0/0:30,0:30:87.25:0,87,1340	0/0:25,0:25:75.26:0,75,1198	0/0:28,0:28:84.29:0,84,1343	0/0:27,0:27:81.26:0,81,1256	0/0:35,0:35:99:0,102,1578	0/0:29,0:29:87.26:0,87,1317	0/0:27,0:27:78.24:0,78,1212	0/0:29,0:28:87.30:0,87,1384	0/0:23,0:22:50.55:0,51,565	0/0:34,0:34:50.91:0,51,733	0/0:40,0:40:41.87:0,42,622	0/0:42,0:42:99:0,126,1977	0/0:34,0:34:99:0,102,1617	0/0:15,0:15:45.15:0,45,719	0/1:19,1:20:31.89:32,0,49	0/0:37,0:37:99:0,111,1725	0/0:35,0:34:55.39:0,55,704	0/0:17,0:16:48.15:0,48,737
chr10	104841551	.	ACACATG	A	2315.68	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=5.765;DP=819;FS=9.691;HRun=0;HaplotypeScore=174.7577;InbreedingCoeff=0.5315;MQ=56.78;MQ0=26;MQRankSum=-4.025;QD=9.73;ReadPosRankSum=-3.751;VQSLOD=1.0585;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:95.90:0,96,1521	0/1:15,0:15:50.01:50,0,179	0/0:22,0:7:1.31:0,1,61	0/0:25,0:9:11.03:0,11,105	0/0:32,0:31:87.03:0,87,1503	0/1:23,0:23:99:191,0,181	0/1:27,0:26:15.07:370,0,15	1/1:26,0:23:65.64:520,66,0	0/0:35,0:35:99:0,102,1822	0/0:42,0:40:99:0,104,2239	0/0:25,0:25:72.11:0,72,1374	0/0:34,0:34:86.98:0,87,1287	0/0:31,0:31:86.96:0,87,1554	0/0:24,0:24:65.97:0,66,1073	0/0:34,0:34:96.07:0,96,1693	0/0:27,0:27:75.09:0,75,1547	0/0:35,0:35:95.94:0,96,1647	0/0:26,0:26:75.35:0,75,1248	1/1:9,13:21:28.86:547,29,0	1/1:2,30:32:24:335,24,0	1/1:6,40:46:0.47:1,0,0	0/0:40,0:40:95.34:0,95,2146	0/0:37,0:37:99:0,105,1613	0/0:15,0:15:39.01:0,39,544	0/1:18,0:18:70.20:93,0,70	0/0:35,0:35:87.14:0,87,1692	1/1:1,28:29:18.06:381,18,0	0/0:20,0:19:56.99:0,57,852
chr10	104842388	.	T	TCCTGCATA	4132.91	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.730;DP=425;FS=3.255;HRun=0;HaplotypeScore=140.2055;InbreedingCoeff=0.9714;MQ=92.40;MQ0=0;MQRankSum=-7.948;QD=77.98;ReadPosRankSum=-1.038;VQSLOD=3.3685;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:45.15:0,45,1171	0/0:3,0:3:9.03:0,9,244	0/0:24,0:24:54.16:0,54,1227	0/0:22,0:22:48.16:0,48,1206	0/0:14,0:14:26.51:0,27,705	1/1:3,10:13:27.09:1077,27,0	1/1:8,9:17:36.08:1239,36,0	0/0:17,0:17:42.14:0,42,1117	0/0:18,0:18:51.18:0,51,1351	0/0:17,0:17:48.12:0,48,1122	0/0:11,0:11:30.10:0,30,790	0/0:19,0:19:45.15:0,45,1189	0/0:7,0:7:18.06:0,18,488	0/0:8,0:8:21.06:0,21,513	0/0:11,0:11:24.08:0,24,644	0/0:12,0:12:30.06:0,30,728	0/0:19,0:19:51.63:0,52,1327	0/0:12,0:12:30.08:0,30,752	0/0:18,0:18:48.12:0,48,1135	0/0:17,0:17:42.14:0,42,1138	0/0:25,0:25:51.18:0,51,1359	0/0:16,0:16:32.80:0,33,863	0/0:15,0:15:36.12:0,36,942	0/0:13,0:13:24.08:0,24,648	1/1:9,14:23:45.15:1817,45,0	0/0:8,0:8:24.08:0,24,651	0/0:13,0:13:27.09:0,27,729	0/0:12,0:12:33.11:0,33,871
chr10	104842676	.	TCACAGCTGGAGGCTAAATAAC	T	3049.41	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.165;DP=507;FS=2.026;HRun=0;HaplotypeScore=271.8316;InbreedingCoeff=0.9666;MQ=86.60;MQ0=0;MQRankSum=-6.648;QD=80.25;ReadPosRankSum=3.269;VQSLOD=3.1927;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,8058	0/0:13,0:13:33.11:0,33,3070	0/0:20,0:21:51.17:0,51,3241	0/0:17,0:17:44.97:0,45,2294	0/0:14,0:14:42.14:0,42,3683	1/1:6,14:20:33.11:1945,33,0	1/1:7,7:14:12.04:707,12,0	0/0:33,0:33:99:0,99,7495	0/0:23,0:23:66.23:0,66,6309	0/0:13,0:13:39.13:0,39,3162	0/0:14,0:14:42.14:0,42,3800	0/0:11,0:11:33.11:0,33,3018	0/0:23,0:23:66.23:0,66,5593	0/0:12,0:12:36.12:0,36,3225	0/0:24,0:24:66.23:0,66,5740	0/0:15,0:15:45.15:0,45,4543	0/0:17,0:17:48.14:0,48,3874	0/0:16,0:16:45.15:0,45,3954	0/0:19,0:19:48.16:0,48,3754	0/0:13,0:13:39.12:0,39,3288	0/0:29,0:29:87.30:0,87,7744	0/0:18,0:18:54.19:0,54,4372	0/0:20,0:20:60.21:0,60,5251	0/0:29,0:29:81.28:0,81,6781	1/1:1,3:4:9.03:531,9,0	0/0:21,0:21:60.21:0,60,5476	0/0:12,0:12:36.12:0,36,3301	0/0:9,0:9:27.09:0,27,2716
chr10	104843016	.	T	TC	168.66	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.378;DP=481;FS=0.000;HRun=3;HaplotypeScore=52.4742;InbreedingCoeff=0.8632;MQ=62.36;MQ0=9;MQRankSum=-3.223;QD=7.67;ReadPosRankSum=-0.985;VQSLOD=0.1324;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1318	0/0:10,0:10:27.08:0,27,323	0/0:17,0:8:20.20:0,20,186	0/0:12,0:4:11.80:0,12,88	0/0:17,0:16:42.13:0,42,503	1/1:1,7:5:12.04:162,12,0	1/1:4,5:7:3.01:42,3,0	0/0:23,0:21:51.11:0,51,594	0/0:8,0:8:24.07:0,24,288	0/0:16,0:15:39.10:0,39,450	0/0:14,0:14:42.13:0,42,503	0/0:17,0:17:45.11:0,45,515	0/0:17,0:17:48.13:0,48,564	0/0:10,0:10:27.07:0,27,313	0/0:24,0:24:69.20:0,69,816	0/0:10,0:10:27.08:0,27,324	0/0:26,0:26:72.18:0,72,837	0/0:22,0:22:51.15:0,51,612	0/0:19,0:19:57.17:0,57,681	0/0:17,0:17:45.14:0,45,540	0/0:23,0:22:60.15:0,60,693	0/0:16,0:16:45.14:0,45,538	0/0:20,0:20:57.14:0,57,650	0/0:30,0:30:87.22:0,87,1028	1/1:0,5:5:6.02:84,6,0	0/0:17,0:17:51.16:0,51,610	0/0:25,0:25:72.20:0,72,847	0/0:10,0:10:24.07:0,24,288
chr10	104843025	.	C	CGG	158.12	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.337;DP=485;FS=1.461;HRun=0;HaplotypeScore=75.8965;InbreedingCoeff=0.8264;MQ=62.31;MQ0=2;MQRankSum=-3.907;QD=4.39;ReadPosRankSum=-1.555;VQSLOD=2.3699;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:40:99:0,117,1878	0/0:7,0:7:18.06:0,18,291	0/0:14,0:8:15.12:0,15,213	0/0:11,0:4:12.04:0,12,154	0/0:19,0:19:45.15:0,45,729	1/1:14,6:17:12.01:195,12,0	1/1:8,2:8:2.95:43,3,0	0/0:19,0:17:48.15:0,48,756	0/0:11,0:11:30.06:0,30,437	0/0:17,0:16:42.13:0,42,662	0/0:13,0:13:39.13:0,39,635	0/0:12,0:12:30.09:0,30,460	0/0:17,0:18:42.14:0,42,662	0/0:9,0:9:27.09:0,27,438	0/0:25,0:25:72.23:0,72,1126	0/0:8,0:8:24.08:0,24,387	0/0:23,0:23:63.20:0,63,997	0/0:19,0:19:57.18:0,57,902	0/0:26,0:26:69.20:0,69,1060	0/0:17,0:18:48.16:0,48,757	0/0:21,0:20:57.16:0,57,861	0/0:15,0:15:42.14:0,42,684	0/0:21,0:21:54.18:0,54,871	0/0:27,0:27:81.28:0,81,1318	1/1:4,1:4:3.01:37,3,0	0/0:19,0:19:57.17:0,57,858	0/0:29,0:29:78.27:0,78,1259	0/0:8,0:8:24.08:0,24,391
chr10	104843331	.	G	GTGAGCCACCATT	5453	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.413;DP=726;FS=1.371;HRun=0;HaplotypeScore=239.0613;InbreedingCoeff=0.9996;MQ=74.01;MQ0=0;MQRankSum=-10.037;QD=121.18;ReadPosRankSum=-1.630;VQSLOD=4.5299;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,150,5350	0/0:12,0:12:36.12:0,36,1343	0/0:25,0:25:72.18:0,72,2090	0/0:29,0:27:60.20:0,60,2025	0/0:24,0:24:60.18:0,60,2068	1/1:3,7:12:30.02:1382,30,0	1/1:9,10:20:48.08:2297,48,0	0/0:34,0:34:90.30:0,90,3092	0/0:28,0:28:84.29:0,84,3014	0/0:27,0:27:72.24:0,72,2516	0/0:16,0:16:48.16:0,48,1726	0/0:30,0:30:90.28:0,90,3090	0/0:24,0:24:69.21:0,69,2360	0/0:24,0:24:72.25:0,72,2582	0/0:26,0:26:69.22:0,69,2310	0/0:24,0:24:63.22:0,63,2309	0/0:40,0:40:99:0,117,4227	0/0:28,0:28:69.20:0,69,2481	0/0:20,0:20:60.17:0,60,1899	0/0:20,0:20:51.17:0,51,1770	0/0:47,0:47:99:0,132,4672	0/0:22,0:22:54.17:0,54,1909	0/0:18,0:18:42.13:0,42,1386	0/0:29,0:29:87.28:0,87,3068	1/1:5,7:13:30.10:1774,30,0	0/0:33,0:33:78.25:0,78,2686	0/0:28,0:28:75.26:0,75,2630	0/0:22,0:22:63.16:0,63,2170
chr10	104843648	.	G	GA	2585.06	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.386;DP=762;FS=0.999;HRun=3;HaplotypeScore=77.1021;InbreedingCoeff=0.9992;MQ=93.34;MQ0=0;MQRankSum=-7.015;QD=35.90;ReadPosRankSum=0.941;VQSLOD=4.2075;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,1380	0/0:16,0:16:45.14:0,45,540	0/0:39,0:40:99:0,106,1315	0/0:29,0:29:84.23:0,84,985	0/0:30,0:30:84.26:0,84,1007	1/1:0,15:15:39.13:545,39,0	1/1:1,35:36:93.31:1301,93,0	0/0:37,0:37:99:0,99,1159	0/0:24,0:24:69.21:0,69,828	0/0:35,0:35:99:0,105,1260	0/0:20,0:20:57.16:0,57,672	0/0:28,0:28:81.25:0,81,972	0/0:32,0:32:93.05:0,93,1115	0/0:27,0:27:75.23:0,75,899	0/0:30,0:30:84.24:0,84,997	0/0:35,0:35:99:0,105,1260	0/0:32,0:32:93.26:0,93,1092	0/0:14,0:14:36.08:0,36,417	0/0:17,0:17:48.15:0,48,576	0/0:29,0:29:81.25:0,81,972	0/0:46,0:46:99:0,126,1512	0/0:23,0:23:69.21:0,69,828	0/0:23,0:23:63.13:0,63,717	0/0:26,0:26:66.20:0,66,792	1/1:0,21:21:63.21:881,63,0	0/0:18,0:18:54.16:0,54,638	0/0:29,0:29:81.25:0,81,971	0/0:8,0:8:24.07:0,24,288
chr10	104843797	.	C	CAT	958.71	PASS	AB=0.952;AC=13;AF=0.232;AN=56;BaseQRankSum=0.151;DP=599;FS=3.745;HRun=0;HaplotypeScore=94.2095;InbreedingCoeff=0.2984;MQ=56.93;MQ0=8;MQRankSum=1.122;QD=5.30;ReadPosRankSum=-1.846;VQSLOD=2.2872;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:99:0,108,1177	0/1:11,0:11:13.09:13,0,48	0/0:20,0:12:36.07:0,36,369	0/0:33,0:22:52.38:0,52,585	0/1:14,0:14:1.51:2,0,284	1/1:8,0:8:8.98:73,9,0	1/1:15,0:15:20.09:140,20,0	0/1:35,0:35:99:432,0,130	0/0:17,0:17:34.82:0,35,435	0/0:28,0:28:83.85:0,84,817	0/0:27,0:27:51.48:0,51,696	0/0:22,0:22:46.20:0,46,674	0/0:17,0:17:44.97:0,45,468	0/0:19,0:19:50.59:0,51,528	0/0:21,0:21:63.01:0,63,764	0/0:16,0:16:42.08:0,42,550	0/0:26,0:26:75:0,75,851	0/0:24,0:24:69.51:0,70,844	0/1:19,0:18:47.16:165,0,47	0/1:9,8:18:15.18:46,0,15	0/1:32,0:31:78.55:126,0,79	0/0:26,0:26:42.92:0,43,587	0/0:14,0:14:36:0,36,385	0/0:35,0:34:91.85:0,92,1059	1/1:12,0:12:8.98:73,9,0	0/0:20,0:20:60.11:0,60,710	0/1:17,0:16:51.11:51,0,86	0/0:9,0:8:23.22:0,23,240
chr10	104844258	.	ATTGT	A	6334.77	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=0.215;DP=397;FS=8.326;HRun=0;HaplotypeScore=89.8720;InbreedingCoeff=0.9101;MQ=64.47;MQ0=4;MQRankSum=0.831;QD=30.90;ReadPosRankSum=1.536;VQSLOD=3.8146;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,18:24:45.15:714,45,0	0/0:2,0:4:3.01:0,3,52	0/0:31,0:21:24.08:0,24,445	0/0:21,0:16:14.26:0,14,248	1/1:8,8:16:21.07:321,21,0	1/1:2,1:3:3.01:48,3,0	1/1:6,7:13:12.04:190,12,0	0/0:26,0:26:24.08:0,24,425	1/1:5,7:13:24.08:361,24,0	0/0:17,0:16:27.09:0,27,645	0/0:6,0:6:6.02:0,6,143	1/1:1,13:14:39.13:619,39,0	1/1:2,8:10:21.07:333,21,0	1/1:1,14:15:45.15:714,45,0	1/1:3,10:13:24.08:381,24,0	0/0:4,0:4:12.04:0,12,287	1/1:3,14:17:42.14:653,42,0	1/1:5,15:20:39.13:619,39,0	0/0:25,0:23:18.06:0,18,321	0/0:9,0:9:9.03:0,9,176	0/0:18,0:18:39.13:0,39,735	1/1:4,7:11:24.08:381,24,0	1/1:2,9:11:18.06:286,18,0	1/1:4,14:18:30.10:476,30,0	1/1:1,5:6:15.05:238,15,0	0/0:11,0:11:27.09:0,27,645	0/0:11,0:11:27.09:0,27,510	0/0:9,0:8:18.06:0,18,430
chr10	104845322	.	TC	T	8268.03	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=20.438;DP=769;FS=10.499;HRun=1;HaplotypeScore=132.0280;InbreedingCoeff=1.0000;MQ=76.17;MQ0=0;MQRankSum=-5.370;QD=36.26;ReadPosRankSum=-1.680;VQSLOD=2.7687;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1915	0/0:13,0:13:39.12:0,39,599	0/0:33,0:33:99:0,99,1468	0/0:29,0:28:49.10:0,49,1031	0/0:18,0:18:54.17:0,54,837	1/1:0,18:18:54.18:701,54,0	1/1:0,33:33:99:1285,99,0	1/1:0,27:22:66.21:857,66,0	0/0:30,0:30:90.29:0,90,1416	0/0:22,0:22:66.23:0,66,1055	0/0:24,0:24:72.25:0,72,1148	0/0:26,0:26:78.27:0,78,1245	0/0:29,0:29:87.27:0,87,1341	0/0:37,0:37:99:0,111,1771	0/0:23,0:23:69.24:0,69,1103	0/0:24,0:24:72.25:0,72,1151	0/0:44,0:44:99:0,132,2014	0/0:29,0:29:84.25:0,84,1294	1/1:0,24:24:72.23:933,72,0	1/1:1,22:23:57.18:734,57,0	1/1:3,52:55:99:1890,147,0	0/0:25,0:25:75.24:0,75,1174	0/0:22,0:22:66.22:0,66,1049	0/0:35,0:35:99:0,105,1655	1/1:0,28:28:84.27:1090,84,0	0/0:22,0:22:66.16:0,66,1025	1/1:0,20:20:60.20:779,60,0	0/0:15,0:15:45.12:0,45,692
chr10	104845392	.	G	GCA	9299.90	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=5.937;DP=750;FS=0.316;HRun=0;HaplotypeScore=106.3188;InbreedingCoeff=0.9996;MQ=76.47;MQ0=0;MQRankSum=-7.426;QD=41.89;ReadPosRankSum=-1.351;VQSLOD=6.0453;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,153,2151	0/0:9,0:9:27.09:0,27,387	0/0:18,0:19:45.13:0,45,599	0/0:16,0:16:39.08:0,39,487	0/0:21,0:21:63.19:0,63,883	1/1:2,18:20:57.18:1012,57,0	1/1:6,22:29:78.25:1366,78,0	1/1:4,22:27:66.19:1162,66,0	0/0:28,0:28:78.26:0,78,1117	0/0:34,0:34:78.26:0,78,1118	0/0:16,0:16:42.13:0,42,585	0/0:29,0:29:84.28:0,84,1203	0/0:24,0:24:66.22:0,66,945	0/0:43,0:43:99:0,117,1635	0/0:34,0:34:96.31:0,96,1356	0/0:29,0:29:75.24:0,75,1057	0/0:28,0:28:75.25:0,75,1074	0/0:26,0:26:78.24:0,78,1093	1/1:2,17:19:54.19:988,54,0	1/1:5,18:23:45.13:791,45,0	1/1:7,48:55:99:1883,108,0	0/0:33,0:33:84.28:0,84,1201	0/0:10,0:10:27.09:0,27,387	0/0:41,0:41:99:0,114,1594	1/1:5,20:25:60.16:1003,60,0	0/0:25,0:25:72.22:0,72,998	1/1:1,23:24:60.21:1094,60,0	0/0:12,0:12:33.08:0,33,435
chr10	104845603	.	CT	C	784.93	PASS	AB=0.775;AC=14;AF=0.250;AN=56;BaseQRankSum=13.438;DP=622;FS=2.410;HRun=1;HaplotypeScore=134.2968;InbreedingCoeff=0.7569;MQ=74.77;MQ0=0;MQRankSum=-13.138;QD=7.77;ReadPosRankSum=0.016;VQSLOD=0.7625;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,151,2392	0/0:18,0:18:51.16:0,51,785	0/0:22,0:22:66.07:0,66,973	0/0:19,0:19:54.17:0,54,819	0/0:20,0:20:60.19:0,60,930	1/1:4,16:20:39.04:263,39,0	1/1:3,7:10:10.45:60,10,0	0/1:9,3:12:32.93:33,0,73	0/0:31,0:31:93.32:0,93,1487	0/0:24,0:24:72.25:0,72,1151	0/0:23,0:23:69.20:0,69,1054	0/0:25,0:25:75.24:0,75,1171	0/0:24,0:24:72.25:0,72,1151	0/0:22,0:22:66.23:0,66,1053	0/0:20,0:20:60.20:0,60,959	0/0:29,0:29:87.27:0,87,1364	0/0:35,0:35:99:0,105,1620	0/0:26,0:25:75.26:0,75,1199	0/1:4,2:6:25.81:26,0,35	1/1:5,11:16:22.58:169,23,0	1/1:2,0:2:0.47:1,0,0	0/0:29,0:29:87.28:0,87,1368	0/0:19,0:19:57.12:0,57,857	0/0:32,0:32:96.33:0,96,1527	1/1:4,15:19:25.77:238,26,0	0/0:27,0:27:81.23:0,81,1266	1/1:4,12:16:25.32:174,25,0	0/0:25,0:25:75.24:0,75,1176
chr10	104845605	.	CAAGTCTTGGGATTA	C	6220.58	PASS	AB=0.683;AC=10;AF=0.179;AN=56;BaseQRankSum=13.645;DP=622;FS=2.138;HRun=0;HaplotypeScore=282.8022;InbreedingCoeff=0.4227;MQ=73.36;MQ0=0;MQRankSum=-13.521;QD=62.83;ReadPosRankSum=0.633;VQSLOD=4.3667;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,160,9898	0/0:17,0:17:48.16:0,48,3275	0/0:21,0:21:60.21:0,60,3502	0/0:17,0:17:48.16:0,48,2846	0/0:21,0:21:60.19:0,60,3757	1/1:4,16:20:35.44:1554,35,0	0/1:3,7:10:15.10:402,0,15	0/1:9,3:12:51.38:383,0,51	0/0:32,0:32:96.33:0,96,6754	0/0:25,0:25:75.26:0,75,4732	0/0:22,0:22:63.22:0,63,4399	0/0:25,0:25:75.24:0,75,5046	0/0:24,0:24:72.25:0,72,5201	0/0:22,0:22:66.23:0,66,4551	0/0:20,0:20:60.21:0,60,3827	0/0:29,0:29:87.30:0,87,5830	0/0:37,0:37:99:0,111,6969	0/0:26,0:25:78.27:0,78,5323	0/1:4,2:6:24.01:223,0,24	0/1:5,11:16:27.29:1054,0,27	0/0:2,0:2:2.94:0,3,18	0/0:29,0:29:87.30:0,87,5931	0/0:19,0:19:54.19:0,54,3847	0/0:31,0:31:93.30:0,93,5754	1/1:4,15:19:1.31:1489,1,0	0/0:27,0:27:81.27:0,81,5378	1/1:4,12:16:23.60:1116,24,0	0/0:24,0:24:72.25:0,72,5133
chr10	104845608	.	GT	G	1050.20	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=13.652;DP=603;FS=1.538;HRun=1;HaplotypeScore=133.1089;InbreedingCoeff=0.9821;MQ=73.02;MQ0=0;MQRankSum=-13.505;QD=12.07;ReadPosRankSum=-0.487;VQSLOD=1.9831;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,150,2352	0/0:16,0:16:48.16:0,48,764	0/0:22,0:22:66.14:0,66,869	0/0:15,0:15:45.14:0,45,656	0/0:20,0:20:60.20:0,60,955	1/1:16,4:20:44.48:261,44,0	1/1:7,2:9:14.99:143,15,0	1/1:3,5:8:19.40:178,19,0	0/0:32,0:32:96.33:0,96,1535	0/0:24,0:24:72.24:0,72,1129	0/0:22,0:22:66.21:0,66,1029	0/0:23,0:23:69.24:0,69,1103	0/0:24,0:24:72.25:0,72,1151	0/0:25,0:25:75.19:0,75,1139	0/0:22,0:22:66.22:0,66,1046	0/0:28,0:28:84.27:0,84,1320	0/0:37,0:37:99:0,111,1719	0/0:27,0:26:78.23:0,78,1220	1/1:2,1:3:7.88:56,8,0	1/1:11,4:15:28.48:150,28,0	./.	0/0:31,0:31:93.24:0,93,1407	0/0:18,0:18:54.18:0,54,863	0/0:29,0:29:87.28:0,87,1363	1/1:15,1:16:39.67:246,40,0	0/0:27,0:27:81.26:0,81,1252	1/1:12,4:16:34.30:208,34,0	0/0:24,0:24:72.25:0,72,1151
chr10	104845959	.	GTGAGCTCTGC	G	4004.41	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=10.351;DP=697;FS=13.784;HRun=0;HaplotypeScore=204.2254;InbreedingCoeff=0.9478;MQ=92.77;MQ0=0;MQRankSum=-8.072;QD=54.11;ReadPosRankSum=-0.832;VQSLOD=2.3509;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:66:99:0,187,9206	0/0:14,0:14:42.14:0,42,1879	0/0:26,0:26:63.22:0,63,2473	0/0:37,0:37:96.24:0,96,3700	0/0:30,0:30:81.28:0,81,3981	0/0:20,0:20:54.19:0,54,2601	0/0:36,0:36:99:0,102,5008	1/1:5,29:34:81.21:2441,81,0	0/0:23,0:23:66.18:0,66,2989	0/0:30,0:30:87.30:0,87,4155	0/0:21,0:21:60.21:0,60,2925	0/0:25,0:25:75.26:0,75,3874	0/0:24,0:24:69.24:0,69,3471	0/0:22,0:22:66.23:0,66,3390	0/0:27,0:27:81.28:0,81,4232	0/0:22,0:22:60.21:0,60,3022	0/0:41,0:41:99:0,117,6065	0/0:15,0:15:45.15:0,45,2088	1/1:3,9:12:27.09:844,27,0	./.	1/1:5,15:20:21.07:622,21,0	0/0:24,0:24:66.23:0,66,3116	0/0:24,0:24:72.25:0,72,3483	0/0:25,0:25:72.25:0,72,3581	0/0:25,0:25:60.21:0,60,3031	0/0:25,0:25:69.24:0,69,3461	1/1:1,7:8:3.01:98,3,0	0/0:13,0:13:39.13:0,39,1930
chr10	104846202	.	T	TAG	3465.92	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.025;DP=582;FS=97.199;HRun=0;HaplotypeScore=123.0778;InbreedingCoeff=0.9823;MQ=81.75;MQ0=0;MQRankSum=-12.430;QD=45.60;ReadPosRankSum=0.506;VQSLOD=-0.5425;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,144,2203	0/0:7,0:7:21.07:0,21,321	0/0:24,0:24:63.15:0,63,889	0/0:15,0:15:42.11:0,42,604	0/0:32,0:31:90.31:0,90,1378	1/1:2,3:5:15.05:268,15,0	1/1:6,4:10:27.09:492,27,0	1/1:16,0:16:45.15:796,45,0	0/0:24,0:24:69.22:0,69,1035	0/0:33,0:33:96.33:0,96,1470	0/0:26,0:26:66.22:0,66,1010	0/0:24,0:24:72.24:0,72,1083	0/0:23,0:23:66.22:0,66,1011	0/0:24,0:24:72.24:0,72,1100	0/0:23,0:23:69.23:0,69,1055	0/0:20,0:20:60.20:0,60,918	0/0:35,0:35:99:0,102,1558	0/0:19,0:19:57.19:0,57,873	1/1:3,2:5:9.03:166,9,0	1/1:2,12:14:42.14:745,42,0	1/1:12,1:13:18.06:304,18,0	0/0:29,0:29:87.30:0,87,1330	0/0:30,0:29:81.26:0,81,1220	0/0:34,0:34:96.27:0,96,1422	1/1:3,5:8:24.08:428,24,0	0/0:20,0:20:60.19:0,60,899	1/1:1,4:5:15.05:268,15,0	0/0:12,0:12:36.12:0,36,551
chr10	104846207	.	C	CAA	989.70	PASS	AB=0.667;AC=13;AF=0.241;AN=54;BaseQRankSum=9.339;DP=542;FS=51.265;HRun=1;HaplotypeScore=101.2139;InbreedingCoeff=0.8712;MQ=84.82;MQ0=0;MQRankSum=-8.947;QD=26.75;ReadPosRankSum=4.492;VQSLOD=0.1212;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,147,2367	0/0:9,0:9:24.07:0,24,367	0/0:22,0:22:60.19:0,60,897	0/0:15,0:15:39.13:0,39,582	0/0:34,0:33:93.32:0,93,1506	1/1:2,3:5:9.01:114,9,0	1/1:0,4:4:12.04:151,12,0	./.	0/0:23,0:23:69.24:0,69,1125	0/0:33,0:33:96.33:0,96,1566	0/0:29,0:29:75.25:0,75,1182	0/0:23,0:23:69.24:0,69,1125	0/0:24,0:24:72.25:0,72,1170	0/0:24,0:24:69.24:0,69,1125	0/0:23,0:23:69.24:0,69,1123	0/0:18,0:18:54.18:0,54,881	0/0:33,0:33:99:0,99,1590	0/0:19,0:19:57.19:0,57,930	0/1:2,2:4:2.83:69,0,3	1/1:1,12:13:36.11:452,36,0	1/1:1,1:2:3.01:38,3,0	0/0:30,0:30:87.25:0,87,1343	0/0:29,0:28:81.28:0,81,1314	0/0:33,0:33:87.30:0,87,1416	1/1:0,5:5:15.05:189,15,0	0/0:21,0:21:63.22:0,63,1023	1/1:0,4:4:12.04:150,12,0	0/0:12,0:12:36.12:0,36,587
chr10	104846208	.	T	TACATTGTATTG	11502.44	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.166;DP=594;FS=78.458;HRun=0;HaplotypeScore=208.5246;InbreedingCoeff=0.9685;MQ=82.79;MQ0=0;MQRankSum=-13.099;QD=133.75;ReadPosRankSum=0.105;VQSLOD=2.1924;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,147,5170	0/0:9,0:9:24.08:0,24,832	0/0:24,0:24:63.20:0,63,2050	0/0:15,0:15:42.04:0,42,1225	0/0:34,0:33:96.32:0,96,3296	1/1:5,3:10:27.09:1172,27,0	1/1:5,4:9:27.09:1278,27,0	1/1:19,0:19:54.19:2673,54,0	0/0:23,0:23:69.24:0,69,2409	0/0:34,0:34:96.33:0,96,3541	0/0:29,0:29:75.26:0,75,2507	0/0:23,0:23:69.24:0,69,2488	0/0:24,0:24:72.25:0,72,2561	0/0:24,0:24:72.23:0,72,2520	0/0:23,0:23:69.24:0,69,2508	0/0:18,0:18:54.19:0,54,1892	0/0:32,0:32:96.33:0,96,3541	0/0:20,0:20:57.20:0,57,2123	1/1:4,2:8:21.07:794,21,0	1/1:9,12:21:60.19:2829,60,0	1/1:0,1:2:3.01:156,3,0	0/0:28,0:28:81.27:0,81,2694	0/0:30,0:29:84.29:0,84,2895	0/0:33,0:33:90.28:0,90,3101	1/1:3,5:8:24.08:1230,24,0	0/0:21,0:21:63.22:0,63,2218	1/1:5,4:9:27.09:1371,27,0	0/0:12,0:12:36.12:0,36,1304
chr10	104846296	.	G	GCACA	1044.06	PASS	AC=10;AF=0.200;AN=50;BaseQRankSum=6.640;DP=450;FS=4.937;HRun=0;HaplotypeScore=96.1953;InbreedingCoeff=0.9029;MQ=65.52;MQ0=0;MQRankSum=-5.980;QD=24.28;ReadPosRankSum=0.605;VQSLOD=3.1565;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,105,1824	0/0:10,0:10:27.09:0,27,476	0/0:15,0:15:42.14:0,42,719	0/0:21,0:20:51.17:0,51,855	0/0:32,0:32:84.27:0,84,1471	1/1:6,2:8:3.01:78,3,0	1/1:9,1:10:5.79:101,6,0	1/1:8,3:11:8.06:162,8,0	0/0:18,0:18:42.14:0,42,755	0/0:29,0:29:78.22:0,78,1360	0/0:20,0:20:42.13:0,42,727	0/0:23,0:22:66.20:0,66,1128	0/0:23,0:23:63.20:0,63,1103	0/0:17,0:17:48.16:0,48,863	0/0:18,0:18:51.17:0,51,910	0/0:13,0:12:33.11:0,33,593	0/0:20,0:20:57.20:0,57,1025	0/0:12,0:12:33.11:0,33,593	./.	1/1:2,5:7:15.05:388,15,0	./.	0/0:21,0:20:54.17:0,54,927	0/0:16,0:16:39.10:0,39,611	0/0:18,0:18:51.13:0,51,883	./.	0/0:18,0:18:48.16:0,48,856	1/1:2,5:7:18.06:466,18,0	0/0:8,0:8:21.07:0,21,377
chr10	104846320	.	T	TGAAAGGTGGAGGTTGGAG	6578.88	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=9.054;DP=464;FS=33.849;HRun=0;HaplotypeScore=215.5012;InbreedingCoeff=0.9301;MQ=58.36;MQ0=0;MQRankSum=-8.437;QD=164.47;ReadPosRankSum=-3.047;VQSLOD=3.1438;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.29:0,96,4630	0/0:9,0:9:27.09:0,27,1402	0/0:19,0:18:42.11:0,42,1817	0/0:17,0:16:48.16:0,48,2170	0/0:37,0:37:96.31:0,96,4316	./.	1/1:3,1:4:12.04:803,12,0	1/1:8,0:8:21.06:1078,21,0	0/0:19,0:18:51.18:0,51,2490	0/0:29,0:29:75.26:0,75,3597	0/0:19,0:19:57.15:0,57,2592	0/0:27,0:26:66.23:0,66,3182	0/0:25,0:25:72.25:0,72,3621	0/0:19,0:18:54.14:0,54,2356	0/0:22,0:22:60.11:0,60,2598	0/0:15,0:14:42.14:0,42,2048	0/0:21,0:21:63.22:0,63,3141	0/0:13,0:13:39.13:0,39,1933	0/0:2,0:2:0:0,0,0	1/1:6,1:6:15.05:993,15,0	1/1:2,0:2:6.02:526,6,0	0/0:22,0:22:54.19:0,54,2698	0/0:19,0:19:51.18:0,51,2470	0/0:19,0:19:54.16:0,54,2338	1/1:8,5:13:36.08:2377,36,0	0/0:25,0:25:69.19:0,69,3097	1/1:6,0:6:15.01:802,15,0	0/0:10,0:10:27.09:0,27,1206
chr10	104846397	.	AT	A	2105	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=8.815;DP=404;FS=8.190;HRun=1;HaplotypeScore=55.1488;InbreedingCoeff=0.9649;MQ=70.04;MQ0=1;MQRankSum=-9.513;QD=33.41;ReadPosRankSum=-1.210;VQSLOD=2.2692;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.20:0,81,1182	0/0:3,0:3:9.02:0,9,115	0/0:14,0:10:19.75:0,20,298	0/0:30,0:24:54.61:0,55,678	0/0:25,0:25:71.99:0,72,976	1/1:0,4:4:12.04:167,12,0	1/1:0,9:9:27.05:353,27,0	1/1:0,11:11:33.11:456,33,0	0/0:18,0:17:48.12:0,48,672	0/0:12,0:12:36.10:0,36,488	0/0:17,0:17:51.09:0,51,734	0/0:17,0:17:48.08:0,48,669	0/0:17,0:17:51.13:0,51,699	0/0:12,0:11:33.04:0,33,465	0/0:11,0:11:33.11:0,33,483	0/0:7,0:7:21.05:0,21,293	0/0:26,0:25:46.17:0,46,848	0/0:11,0:11:24.05:0,24,334	1/1:0,6:6:15.05:209,15,0	1/1:0,6:6:15.01:187,15,0	1/1:0,3:3:9.03:125,9,0	0/0:12,0:12:36.11:0,36,517	0/0:21,0:21:63.21:0,63,939	0/0:19,0:19:51.10:0,51,714	1/1:1,18:19:48.03:601,48,0	0/0:27,0:27:81.21:0,81,1164	1/1:0,5:5:15.05:208,15,0	0/0:13,0:13:39.10:0,39,552
chr10	104846422	.	T	TTG	723.30	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=8.360;DP=349;FS=0.747;HRun=0;HaplotypeScore=66.0490;InbreedingCoeff=0.8215;MQ=68.09;MQ0=1;MQRankSum=-5.863;QD=13.65;ReadPosRankSum=-3.522;VQSLOD=2.4050;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:81.26:0,81,1288	0/0:5,0:5:15.05:0,15,244	0/1:10,0:8:2.11:2,0,162	0/0:26,0:18:36.48:0,36,537	0/0:20,0:20:60.17:0,60,917	1/1:3,1:4:8.95:82,9,0	1/1:2,0:2:2.97:20,3,0	1/1:3,1:4:12:157,12,0	0/0:14,0:14:39.07:0,39,580	0/0:11,0:11:33.11:0,33,518	0/0:16,0:16:39.12:0,39,608	0/0:10,0:10:27.08:0,27,417	0/0:12,0:12:36.07:0,36,533	0/0:9,0:9:27.08:0,27,415	0/0:12,0:12:33.11:0,33,530	0/0:7,0:7:21.07:0,21,342	0/0:31,0:30:84.25:0,84,1315	0/0:11,0:11:32.31:0,32,471	1/1:3,0:3:3:26,3,0	1/1:0,9:9:21.07:290,21,0	1/1:3,0:3:2.97:20,3,0	0/0:6,0:6:18.06:0,18,293	0/0:17,0:17:51.15:0,51,782	0/0:15,0:15:39.09:0,39,606	1/1:4,10:14:18.06:248,18,0	0/0:23,0:23:66.15:0,66,999	1/1:4,0:4:8.90:60,9,0	0/0:18,0:18:54.18:0,54,880
chr10	104846427	.	A	ATG	580.32	PASS	AB=0.875;AC=12;AF=0.231;AN=52;BaseQRankSum=7.322;DP=340;FS=9.919;HRun=0;HaplotypeScore=65.2570;InbreedingCoeff=0.6784;MQ=64.01;MQ0=1;MQRankSum=-5.378;QD=13.82;ReadPosRankSum=-0.373;VQSLOD=1.8597;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:81.28:0,81,1317	0/0:5,0:5:15.05:0,15,245	0/1:9,0:6:7.40:7,0,162	0/0:24,0:17:14.53:0,15,403	0/0:19,0:19:57.16:0,57,901	1/1:0,1:1:3.01:41,3,0	1/1:2,0:2:3.01:30,3,0	0/1:2,1:3:16.26:35,0,16	0/0:15,0:15:36.12:0,36,585	0/0:11,0:11:33.11:0,33,534	0/0:14,0:14:42.14:0,42,680	0/0:11,0:11:30.05:0,30,436	0/0:12,0:12:33.11:0,33,537	0/0:9,0:9:27.09:0,27,438	0/0:13,0:13:33.11:0,33,537	0/0:8,0:8:24.05:0,24,365	0/0:29,0:28:78.27:0,78,1272	0/0:12,0:12:30.10:0,30,489	./.	1/1:1,9:10:21.07:292,21,0	1/1:3,0:3:6.02:82,6,0	0/0:6,0:6:18.06:0,18,294	0/0:15,0:15:45.15:0,45,734	0/0:15,0:15:42.14:0,42,682	1/1:4,10:14:18.06:249,18,0	0/0:20,0:20:60.20:0,60,978	./.	0/0:18,0:18:54.18:0,54,881
chr10	104846668	.	T	TC	598.72	PASS	AB=0.500;AC=11;AF=0.212;AN=52;BaseQRankSum=4.505;DP=370;FS=41.534;HRun=3;HaplotypeScore=133.3326;InbreedingCoeff=0.8621;MQ=91.52;MQ0=0;MQRankSum=-5.027;QD=18.71;ReadPosRankSum=-0.805;VQSLOD=0.6855;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:81.14:0,81,936	0/0:8,0:8:24.07:0,24,286	0/0:19,0:18:41.31:0,41,455	0/0:22,0:21:27.95:0,28,478	0/0:21,0:21:53.99:0,54,595	0/1:0,1:1:0:0,0,0	1/1:2,4:6:9.03:125,9,0	1/1:1,1:2:2.97:20,3,0	0/0:19,0:19:57.17:0,57,682	0/0:16,0:16:45.14:0,45,537	0/0:17,0:17:36.04:0,36,405	0/0:12,0:12:33.10:0,33,395	0/0:14,0:14:39.09:0,39,452	0/0:10,0:10:30.09:0,30,354	0/0:21,0:21:51.10:0,51,585	0/0:10,0:10:24.07:0,24,279	0/0:28,0:28:81.15:0,81,927	0/0:20,0:20:60.18:0,60,715	1/1:1,4:7:8.96:113,9,0	./.	./.	0/0:9,0:9:17.93:0,18,181	0/0:12,0:12:30.09:0,30,360	0/0:17,0:17:42.13:0,42,498	1/1:1,2:3:5.83:33,6,0	0/0:21,0:21:63.19:0,63,754	1/1:0,13:13:33.11:456,33,0	0/0:7,0:7:20.99:0,21,211
chr10	104847227	.	T	TAGGTTCAG	7736.06	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.744;DP=695;FS=57.854;HRun=0;HaplotypeScore=181.2853;InbreedingCoeff=0.9927;MQ=51.70;MQ0=5;MQRankSum=-11.738;QD=59.97;ReadPosRankSum=-0.444;VQSLOD=2.3541;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,126,3235	0/0:11,0:11:27.09:0,27,731	0/0:23,0:12:33.10:0,33,753	0/0:31,0:30:81.28:0,81,2076	0/0:23,0:23:47.91:0,48,1096	1/1:9,8:16:33.11:1252,33,0	1/1:8,9:18:36.12:1224,36,0	1/1:16,4:14:12.04:397,12,0	0/0:33,0:33:99:0,99,2411	0/0:29,0:29:63.21:0,63,1548	0/0:17,0:17:41.97:0,42,931	0/0:27,0:27:69.24:0,69,1806	0/0:28,0:28:63.22:0,63,1708	0/0:17,0:17:42.14:0,42,1130	0/0:33,0:33:90.29:0,90,2382	0/0:31,0:31:75.17:0,75,1807	0/0:51,0:51:99:0,138,3509	0/0:20,0:20:48.16:0,48,1301	1/1:10,5:14:29.99:924,30,0	1/1:8,8:16:21.07:890,21,0	1/1:5,6:13:24.08:927,24,0	0/0:33,0:33:84.02:0,84,1978	0/0:21,0:20:54.03:0,54,1329	0/0:42,0:42:99:0,114,3043	1/1:5,4:9:21.07:696,21,0	0/0:29,0:29:75.26:0,75,1999	1/1:8,10:19:39.13:1426,39,0	0/0:19,0:19:57.13:0,57,1427
chr10	104847479	.	GTTTGTTT	G	607.59	PASS	AB=0.869;AC=18;AF=0.643;AN=28;BaseQRankSum=-3.657;DP=324;FS=2.884;HRun=0;HaplotypeScore=99.1367;InbreedingCoeff=-0.0551;MQ=59.50;MQ0=0;MQRankSum=1.509;QD=4.67;ReadPosRankSum=-0.585;VQSLOD=1.4304;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:3.01:50,3,0	./.	0/1:8,4:14:99:320,0,276	0/1:6,1:9:60.29:60,0,220	0/0:12,1:13:2.97:0,3,20	./.	./.	1/1:4,0:4:3:28,3,0	./.	0/1:14,0:14:31.87:32,0,226	0/0:11,0:11:4.68:0,5,210	./.	./.	./.	./.	./.	./.	1/1:6,0:6:2.99:24,3,0	1/1:9,0:9:3.01:52,3,0	1/1:10,4:14:3.01:39,3,0	1/1:3,0:3:3.01:50,3,0	./.	0/0:18,0:18:4.31:0,4,192	1/1:12,0:12:3.01:44,3,0	./.	0/1:20,0:20:13.97:14,0,111	./.	./.
chr10	104847528	.	G	GC	309.40	PASS	AC=10;AF=0.714;AN=14;BaseQRankSum=3.351;DP=23;FS=34.236;HRun=0;HaplotypeScore=61.4656;MQ=160.34;MQ0=0;MQRankSum=-3.532;QD=22.10;ReadPosRankSum=2.808;VQSLOD=2.1521;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:4,0:4:8.88:0,9,58	0/0:3,0:5:10.73:0,11,52	1/1:0,4:4:9.03:103,9,0	./.	./.	./.	./.	1/1:0,2:2:6.02:82,6,0	1/1:0,3:3:6.02:68,6,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,4:4:9.03:106,9,0	./.	./.	1/1:0,1:1:3.01:42,3,0	./.	./.
chr10	104847579	.	T	TC	101.15	PASS	AB=0.955;AC=10;AF=0.227;AN=44;BaseQRankSum=1.483;DP=122;FS=8.985;HRun=1;HaplotypeScore=113.8959;InbreedingCoeff=0.3726;MQ=62.88;MQ0=0;MQRankSum=0.199;QD=3.75;ReadPosRankSum=-0.763;VQSLOD=-0.6188;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:1:1.55:4,2,0	0/0:3,0:3:1.75:0,2,5	0/0:5,0:5:0.90:0,1,34	./.	0/0:12,0:12:22.05:0,22,209	0/0:1,1:2:2.04:0,2,6	0/0:2,0:2:4.07:0,4,12	./.	0/0:7,0:7:13.03:0,13,94	0/0:10,0:10:14.63:0,15,232	0/0:4,0:4:8.92:0,9,94	0/0:8,0:8:15.63:0,16,112	0/0:11,0:11:26.63:0,27,288	0/0:2,0:2:0.46:0,0,3	0/0:7,0:7:17.81:0,18,136	0/0:6,0:6:12.43:0,12,98	0/0:1,0:1:3:0,3,29	./.	./.	./.	./.	0/1:8,0:8:1.45:1,0,149	0/0:9,0:9:16.02:0,16,133	1/1:4,0:4:0.22:2,0,0	1/1:0,3:3:9.03:132,9,0	0/1:9,1:10:23.42:23,0,93	1/1:0,1:1:3.01:45,3,0	0/0:1,0:1:0.89:0,1,2
chr10	104847587	.	CTTTG	C	2940.08	PASS	AB=0.679;AC=27;AF=0.614;AN=44;BaseQRankSum=-3.329;DP=126;FS=5.006;HRun=0;HaplotypeScore=116.5254;InbreedingCoeff=-0.2637;MQ=48.36;MQ0=0;MQRankSum=-0.829;QD=25.57;ReadPosRankSum=-0.711;VQSLOD=3.0865;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:3.01:55,3,0	1/1:2,3:5:14.95:192,15,0	0/0:3,0:3:5.23:0,5,85	./.	0/1:7,5:12:49.08:275,0,49	0/0:1,0:2:2.84:0,3,14	0/0:2,0:2:4.40:0,4,18	./.	0/1:2,5:7:36.65:208,0,37	0/1:8,3:11:99:193,0,143	0/1:5,0:5:29.17:65,0,29	0/1:2,6:8:49.48:281,0,49	0/1:7,4:11:99:161,0,151	1/1:0,2:2:6.02:104,6,0	0/1:3,4:7:76.26:164,0,76	0/1:2,4:6:53.04:176,0,53	1/1:2,0:2:5.98:60,6,0	./.	./.	./.	./.	0/1:5,4:9:49.98:220,0,50	0/1:3,6:9:80.03:258,0,80	1/1:1,3:4:8.86:122,9,0	1/1:0,0:3:9.01:82,9,0	0/1:2,7:10:28.05:340,0,28	1/1:0,0:1:3:27,3,0	1/1:1,1:2:6.02:98,6,0
chr10	104847596	.	C	CT	94.22	PASS	AB=0.861;AC=5;AF=0.104;AN=48;BaseQRankSum=-0.365;DP=178;FS=0.000;HRun=2;HaplotypeScore=147.1647;InbreedingCoeff=0.0471;MQ=39.06;MQ0=0;MQRankSum=-1.345;QD=4.10;ReadPosRankSum=-2.634;VQSLOD=-0.6215;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:0.22:0,0,12	0/0:6,0:6:4.13:0,4,32	0/0:2,0:2:6.01:0,6,62	./.	0/0:14,0:14:29.55:0,30,283	0/0:4,1:5:8.73:0,9,49	0/0:3,0:3:5.83:0,6,33	0/0:3,0:2:5.20:0,5,29	0/0:9,0:9:13.51:0,14,117	0/0:14,0:13:32.21:0,32,335	0/0:10,0:10:18.06:0,18,165	0/0:8,0:8:18.02:0,18,119	0/0:13,0:13:22.28:0,22,285	0/0:4,0:4:5.06:0,5,31	0/0:10,0:10:18.90:0,19,151	0/0:7,0:7:17.71:0,18,113	0/0:3,0:3:5.60:0,6,44	./.	0/1:3,0:3:26.62:30,0,27	./.	./.	0/0:14,0:14:26.09:0,26,252	0/0:12,0:12:15.17:0,15,169	0/0:4,0:4:2.26:0,2,11	0/1:3,3:6:13.47:116,0,13	0/1:10,1:11:13.80:14,0,127	1/1:2,1:3:1.64:39,2,0	0/0:5,0:5:5.94:0,6,60
chr10	104847613	.	TC	T	2317.52	PASS	AB=0.695;AC=16;AF=0.320;AN=50;BaseQRankSum=0.304;DP=212;FS=6.493;HRun=2;HaplotypeScore=130.7064;InbreedingCoeff=-0.5318;MQ=51.54;MQ0=0;MQRankSum=-4.256;QD=15.05;ReadPosRankSum=-3.973;VQSLOD=1.9626;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:2,3:5:32.78:91,0,33	0/1:4,2:6:66.01:133,0,66	0/0:8,1:9:1.90:0,2,159	0/0:4,0:2:6.02:0,6,87	0/1:12,4:16:99:169,0,325	0/0:4,1:5:7.84:0,8,94	0/0:1,2:3:3.37:0,3,9	0/0:6,0:5:6.42:0,6,165	0/1:4,6:10:95.85:239,0,96	0/1:13,4:16:65.74:66,0,493	0/0:11,1:11:18.63:0,19,353	0/1:4,4:8:65.55:178,0,66	0/1:9,5:14:99:150,0,213	0/1:2,3:5:20.86:140,0,21	0/1:4,7:11:99:226,0,137	0/1:4,4:8:99:156,0,102	0/1:2,1:3:28.57:29,0,81	./.	0/0:6,0:5:11.98:0,12,134	./.	./.	0/1:12,4:16:99:159,0,293	0/1:5,8:13:99:271,0,133	0/1:3,2:5:35.18:59,0,35	0/0:6,0:6:17.89:0,18,228	0/1:5,6:11:96.57:268,0,97	0/0:3,0:3:5.75:0,6,56	0/1:3,3:6:69.90:127,0,70
chr10	104847665	.	AGTCTCT	A	82.81	PASS	AB=0.753;AC=10;AF=0.500;AN=20;BaseQRankSum=2.430;DP=61;FS=31.460;HRun=0;HaplotypeScore=35.9239;InbreedingCoeff=0.1849;MQ=94.84;MQ0=0;MQRankSum=-1.042;QD=2.59;ReadPosRankSum=0.887;VQSLOD=-0.2693;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:4,0:5:46.83:47,0,101	0/1:4,0:5:11.50:11,0,48	1/1:0,2:2:5.90:37,6,0	./.	./.	0/0:3,0:3:6.02:0,6,128	./.	0/0:2,0:2:3.01:0,3,61	./.	./.	./.	./.	./.	./.	./.	0/0:1,0:1:3.01:0,3,59	./.	1/1:8,1:9:3:26,3,0	./.	1/1:2,2:4:5.94:40,6,0	1/1:1,1:2:2.92:17,3,0	./.	./.	./.	0/0:3,0:3:6.02:0,6,90	./.
chr10	104849069	.	G	GCA	235.33	PASS	AB=0.800;AC=3;AF=0.054;AN=56;BaseQRankSum=5.404;DP=643;FS=11.117;HRun=0;HaplotypeScore=116.2928;InbreedingCoeff=-0.0630;MQ=58.86;MQ0=1;MQRankSum=-2.946;QD=2.98;ReadPosRankSum=-5.036;VQSLOD=-0.6233;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,120,1658	0/0:18,0:18:48.16:0,48,671	0/0:13,0:11:23.93:0,24,265	0/0:10,0:8:13.12:0,13,232	0/0:31,0:30:93.31:0,93,1300	0/0:16,0:16:12.04:0,12,168	0/1:11,8:19:86.69:87,0,151	0/1:33,3:36:99:167,0,1082	0/0:17,0:17:45.15:0,45,630	0/0:50,0:50:99:0,144,2017	0/0:33,0:33:93.31:0,93,1301	0/0:23,0:23:66.22:0,66,922	0/0:20,0:20:60.20:0,60,839	0/0:26,0:26:72.22:0,72,988	0/0:27,0:26:81.27:0,81,1134	0/0:10,0:10:27.09:0,27,377	0/0:19,0:19:48.12:0,48,649	0/0:26,0:25:78.23:0,78,1072	0/0:10,0:10:21.77:0,22,332	0/0:23,0:23:34.21:0,34,537	0/1:17,7:24:69.83:82,0,70	0/0:23,0:23:69.23:0,69,966	0/0:20,0:20:60.17:0,60,806	0/0:12,0:12:33.11:0,33,462	0/0:37,0:37:63.16:0,63,918	0/0:33,0:33:99:0,99,1356	0/0:16,0:16:26.66:0,27,307	0/0:2,0:2:6.02:0,6,84
chr10	104849075	.	G	GTGCACATGCACACACA	10070.37	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-6.291;DP=695;FS=8.733;HRun=0;HaplotypeScore=267.0666;InbreedingCoeff=0.8971;MQ=57.22;MQ0=1;MQRankSum=-9.493;QD=42.49;ReadPosRankSum=-4.359;VQSLOD=2.4891;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:96.31:0,96,3862	0/0:18,0:18:48.15:0,48,1858	0/1:16,0:11:3.51:4,0,42	0/0:14,0:9:6.43:0,6,92	0/0:32,0:31:78.27:0,78,3148	1/1:3,13:22:15.05:725,15,0	1/1:19,0:19:14.12:535,14,0	1/1:34,0:34:74.62:1749,75,0	0/0:18,0:18:48.16:0,48,1893	0/0:51,0:51:99:0,129,5236	0/0:35,0:35:87.30:0,87,3379	0/0:24,0:24:63.22:0,63,2476	0/0:20,0:20:57.20:0,57,2434	0/0:25,0:25:75.20:0,75,2844	0/0:29,0:28:81.26:0,81,3238	0/0:11,0:11:30.10:0,30,1064	0/0:18,0:18:39.05:0,39,1307	0/0:27,0:26:75.17:0,75,3021	1/1:4,7:16:32.63:1342,33,0	1/1:7,13:32:21.07:1090,21,0	1/1:30,0:30:27.46:1085,27,0	0/0:26,0:26:75.24:0,75,2942	0/0:22,0:22:48.16:0,48,1884	0/0:13,0:13:30.10:0,30,1293	1/1:6,30:45:54.18:2728,54,0	0/0:32,0:32:87.29:0,87,3436	1/1:5,11:23:12.04:813,12,0	0/0:2,0:2:6.02:0,6,268
chr10	104849219	.	ACACACATG	A	4568.69	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.744;DP=872;FS=4.473;HRun=0;HaplotypeScore=220.8606;InbreedingCoeff=0.8908;MQ=51.86;MQ0=13;MQRankSum=-5.020;QD=27.52;ReadPosRankSum=-4.058;VQSLOD=3.8689;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:41:83.35:0,83,2918	0/0:13,0:13:23.78:0,24,840	0/0:39,0:13:18.06:0,18,519	0/0:42,0:22:50.95:0,51,1429	0/0:34,0:34:87.28:0,87,2941	0/0:3,10:13:0:0,0,0	1/1:13,5:18:21.06:437,21,0	1/1:16,32:47:96.16:1786,96,0	0/0:31,0:31:69.49:0,69,2255	0/0:36,0:35:84.29:0,84,2845	0/0:23,0:23:45.12:0,45,1302	0/0:37,0:36:99:0,99,3586	0/0:32,0:32:78.25:0,78,2808	0/0:41,0:41:99:0,108,3980	0/0:25,0:25:66.22:0,66,2602	0/0:22,0:22:66.23:0,66,2182	0/0:23,0:23:51.98:0,52,1662	0/0:27,0:26:29.09:0,29,1631	1/1:13,17:26:45.07:944,45,0	1/1:13,8:20:14.82:363,15,0	0/0:15,58:72:0.47:0,0,2	0/0:26,0:26:60.04:0,60,2243	0/0:20,0:20:48.11:0,48,1568	0/0:48,0:48:99:0,108,4043	1/1:5,19:24:0.69:1,1,0	0/0:43,0:43:99:0,105,3806	1/1:4,21:25:42.12:1037,42,0	0/0:17,0:17:45.15:0,45,1670
chr10	104849225	.	ATG	A	589.34	PASS	AB=0.994;AC=8;AF=0.143;AN=56;BaseQRankSum=11.741;DP=838;FS=3.196;HRun=0;HaplotypeScore=150.1047;InbreedingCoeff=0.0731;MQ=54.15;MQ0=10;MQRankSum=-6.808;QD=3.71;ReadPosRankSum=-2.797;VQSLOD=2.2073;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:91.82:0,92,1759	0/0:13,0:13:30.09:0,30,546	0/0:38,0:18:44.63:0,45,728	0/0:40,1:24:30.08:0,30,1226	0/0:33,0:33:93.31:0,93,1844	0/1:11,0:11:0.14:0,0,0	0/1:17,0:17:8.14:8,0,198	0/1:39,0:38:99:272,0,554	0/0:31,1:32:70.73:0,71,1626	0/0:33,0:32:96.33:0,96,1815	0/0:21,0:21:60.18:0,60,1040	0/0:40,0:39:99:0,111,2126	0/0:32,0:32:96.33:0,96,1896	0/0:39,0:39:99:0,114,2220	0/0:24,0:24:69.22:0,69,1333	0/0:22,0:22:66.23:0,66,1324	0/0:21,0:21:41.17:0,41,1096	0/0:26,1:26:4.57:0,5,1178	0/1:25,0:22:99:235,0,245	0/1:20,0:19:75.96:76,0,165	0/0:69,1:69:12.51:0,13,234	0/0:25,0:25:63.22:0,63,1266	0/0:19,0:19:54.18:0,54,1084	0/0:50,0:50:99:0,132,2517	1/1:20,1:21:0.55:1,1,0	0/0:39,0:39:99:0,117,2294	0/1:25,0:25:99:111,0,191	0/0:17,0:17:48.16:0,48,975
chr10	104849270	.	TAC	T	113.41	PASS	AB=0.962;AC=11;AF=0.196;AN=56;BaseQRankSum=5.068;DP=890;FS=11.086;HRun=0;HaplotypeScore=164.2251;InbreedingCoeff=-0.0637;MQ=54.51;MQ0=9;MQRankSum=0.267;QD=0.32;ReadPosRankSum=-2.829;VQSLOD=1.1693;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:65.12:0,65,972	1/1:3,0:14:10.97:56,11,0	0/0:43,0:22:8.78:0,9,103	0/1:48,0:28:15.20:16,0,15	0/0:23,0:23:35.61:0,36,503	0/0:17,0:17:5.47:0,5,251	0/0:22,0:22:5.91:0,6,445	0/1:38,0:39:42.03:42,0,368	0/0:43,1:45:1.93:0,2,1232	0/0:31,2:33:7.67:0,8,647	0/0:18,0:18:36.01:0,36,510	0/0:43,1:43:74.97:0,75,1146	0/0:32,1:33:12.75:0,13,1006	0/1:40,0:40:7.63:8,0,732	0/1:36,3:39:49.36:49,0,1021	0/1:31,2:33:20.05:20,0,985	0/1:24,1:24:4.37:4,0,574	0/0:22,0:20:36.12:0,36,550	0/0:24,0:21:26.77:0,27,336	0/0:21,0:20:23.74:0,24,281	0/0:71,1:70:55.67:0,56,1039	0/1:19,2:21:38.26:38,0,337	0/0:20,0:19:26.86:0,27,375	0/1:55,1:57:5.78:6,0,1281	0/0:23,0:23:15.22:0,15,177	0/1:32,1:33:15.96:16,0,477	0/0:23,0:22:1.99:0,2,337	0/0:13,0:13:17.98:0,18,248
chr10	104849582	.	ACTCT	A	3061.81	PASS	AB=0.773;AC=36;AF=0.643;AN=56;BaseQRankSum=0.837;DP=613;FS=6.500;HRun=0;HaplotypeScore=129.1577;InbreedingCoeff=0.4887;MQ=63.95;MQ0=14;MQRankSum=1.130;QD=6.60;ReadPosRankSum=-1.914;VQSLOD=2.0435;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,25:35:26.48:39,0,26	0/1:3,0:8:0:0,0,0	0/0:27,0:15:3.01:0,3,43	0/0:28,0:17:1.41:0,1,2	0/1:10,9:19:0:0,0,0	0/1:10,0:10:0:0,0,0	1/1:20,0:24:27.09:382,27,0	1/1:29,0:28:8.39:93,8,0	1/1:15,10:26:3:29,3,0	0/0:24,0:24:15.94:0,16,263	0/1:17,0:16:28.82:29,0,228	0/1:7,10:18:0:1,0,0	1/1:20,0:19:18.04:238,18,0	1/1:18,0:17:10.95:143,11,0	1/1:20,0:19:18.04:242,18,0	0/0:27,1:28:24.54:0,25,367	1/1:30,1:31:39.11:564,39,0	0/1:18,0:17:76.47:167,0,76	1/1:11,7:17:20.30:282,20,0	1/1:19,0:18:15.01:201,15,0	1/1:30,0:29:6.01:69,6,0	0/1:10,9:19:0:0,0,0	1/1:21,0:21:18.02:218,18,0	1/1:14,15:30:6.02:95,6,0	1/1:13,0:12:15.05:225,15,0	0/0:29,0:29:37.05:0,37,572	1/1:16,0:17:15.05:206,15,0	0/0:13,0:13:11.69:0,12,141
chr10	104850137	.	TCA	T	4683.79	PASS	AB=0.622;AC=15;AF=0.268;AN=56;BaseQRankSum=13.974;DP=806;FS=3.731;HRun=0;HaplotypeScore=106.2860;InbreedingCoeff=0.8464;MQ=59.09;MQ0=35;MQRankSum=-0.367;QD=22.09;ReadPosRankSum=-0.506;VQSLOD=5.2741;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:53:99:0,123,2100	0/0:14,1:15:4.94:0,5,602	0/0:90,1:23:50.33:0,50,677	0/0:95,0:34:42.51:0,43,563	0/0:23,0:23:54.18:0,54,881	1/1:1,13:13:33.10:409,33,0	1/1:7,8:16:26.92:312,27,0	1/1:21,23:41:74.35:905,74,0	0/0:19,0:19:45.11:0,45,683	0/0:31,2:33:3.91:0,4,1106	0/0:22,0:22:57.19:0,57,935	0/0:19,0:19:48.14:0,48,761	0/0:21,0:21:48.16:0,48,786	0/0:19,0:19:54.18:0,54,886	0/0:17,1:18:10.94:0,11,676	0/0:16,0:16:42.14:0,42,689	0/0:25,0:25:63.21:0,63,1027	0/0:20,1:21:4.97:0,5,596	0/1:9,14:20:6.83:382,0,7	1/1:5,23:28:60.19:744,60,0	1/1:15,30:44:38.16:988,38,0	0/0:18,1:19:10.99:0,11,701	0/0:18,0:17:42.14:0,42,686	0/0:30,2:32:56.13:0,56,1439	1/1:6,10:16:21.07:260,21,0	0/0:23,0:23:60.20:0,60,977	1/1:4,20:24:56.98:683,57,0	0/0:11,0:11:30.10:0,30,492
chr10	104851306	.	TTG	T	128.98	PASS	AB=0.976;AC=17;AF=0.304;AN=56;BaseQRankSum=2.857;DP=571;FS=0.000;HRun=0;HaplotypeScore=99.6741;InbreedingCoeff=0.1250;MQ=57.33;MQ0=39;MQRankSum=-0.106;QD=0.50;ReadPosRankSum=-0.337;VQSLOD=1.7246;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:48.61:0,49,569	1/1:8,0:6:9.02:99,9,0	1/1:50,0:19:0.47:1,0,0	0/0:37,0:15:3.43:0,3,20	0/1:16,0:16:9.30:9,0,232	0/0:23,0:20:8.64:0,9,47	0/0:18,0:17:6.68:0,7,32	0/0:44,0:40:18.57:0,19,168	0/0:10,0:9:12.04:0,12,182	0/0:24,0:21:24.07:0,24,323	0/1:12,0:12:7.56:8,0,302	0/1:12,0:9:14.32:14,0,168	0/0:11,0:10:11.40:0,11,145	0/0:11,0:9:17.99:0,18,232	0/0:14,0:14:3.92:0,4,217	0/1:14,2:15:4.11:4,0,318	0/1:21,1:22:1.30:1,0,378	0/0:17,0:17:25.73:0,26,338	0/1:24,0:21:13.97:14,0,21	1/1:10,0:8:2.79:19,3,0	1/1:31,0:26:5.74:34,6,0	0/0:20,1:20:27.08:0,27,391	0/1:13,1:13:16.66:17,0,144	0/0:20,0:18:5.93:0,6,292	0/0:18,0:18:10.15:0,10,39	0/1:26,0:26:51.40:51,0,439	0/1:14,0:13:0.39:0,0,1	0/0:8,0:6:3.02:0,3,41
chr10	104851324	.	G	GTGTT	2012.36	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=4.064;DP=634;FS=3.527;HRun=0;HaplotypeScore=115.6206;InbreedingCoeff=0.5440;MQ=48.14;MQ0=95;MQRankSum=-3.030;QD=13.07;ReadPosRankSum=2.970;VQSLOD=3.3477;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:34:68.66:0,69,1006	0/0:10,0:7:8.80:0,9,62	0/0:35,0:9:11.13:0,11,94	0/0:27,0:5:9.47:0,9,90	0/0:21,0:16:44.94:0,45,518	1/1:18,2:15:20.70:554,21,0	1/1:16,1:12:30.09:595,30,0	0/0:49,0:38:9.21:0,9,365	0/0:12,0:9:12.04:0,12,227	0/0:26,0:21:38.07:0,38,482	0/0:16,0:16:35.36:0,35,493	0/0:17,0:10:23.85:0,24,360	0/0:17,0:14:17.83:0,18,253	0/0:15,0:11:26.93:0,27,391	0/0:21,0:16:30.03:0,30,413	0/0:21,0:17:35.69:0,36,557	0/0:24,0:23:35.81:0,36,676	0/0:20,0:17:37.31:0,37,526	0/1:20,0:11:38.43:38,0,62	0/1:16,0:11:11.17:31,0,11	0/1:41,0:32:1.55:104,0,2	0/0:21,0:19:33.02:0,33,558	0/0:17,0:14:30.03:0,30,376	0/0:23,0:20:36.63:0,37,528	1/1:19,3:19:33.15:764,33,0	0/0:36,0:31:84.86:0,85,1014	0/1:17,0:13:28.58:88,0,29	0/0:12,0:9:17.82:0,18,116
chr10	104851384	.	GTGTGTGTT	G	1716.60	PASS	AB=0.907;AC=9;AF=0.161;AN=56;BaseQRankSum=8.208;DP=637;FS=0.000;HRun=0;HaplotypeScore=142.1346;InbreedingCoeff=0.0775;MQ=46.93;MQ0=65;MQRankSum=-3.592;QD=8.41;ReadPosRankSum=-0.980;VQSLOD=2.4070;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:46:86.03:0,86,3003	0/0:9,0:7:10.24:0,10,253	0/0:12,0:7:19.41:0,19,238	0/0:8,0:4:12.04:0,12,258	0/0:24,0:19:45:0,45,1157	0/1:25,1:21:16.77:268,0,17	0/1:25,0:20:26.77:27,0,52	0/1:28,15:30:99:586,0,187	0/0:19,0:17:36.11:0,36,1155	0/0:34,0:30:75.20:0,75,1815	0/0:10,0:9:20.66:0,21,580	0/0:24,0:17:42.10:0,42,1117	0/0:17,0:13:31.14:0,31,843	0/0:20,0:15:43.63:0,44,1246	0/0:21,0:16:21.33:0,21,773	0/0:16,0:13:27.05:0,27,670	0/0:31,0:31:56.32:0,56,2534	0/0:27,0:23:51.96:0,52,1395	1/1:17,0:11:23.88:323,24,0	0/1:9,11:16:32.02:425,0,32	0/1:34,0:26:89.96:90,0,169	0/0:25,0:23:53.80:0,54,1408	0/0:14,0:13:27.05:0,27,720	0/0:36,0:33:46.14:0,46,1772	0/1:17,0:15:13.08:88,0,13	0/0:30,0:23:62.52:0,63,1752	0/1:22,0:20:56.19:56,0,85	0/0:8,0:7:18.06:0,18,615
chr10	104851386	.	GTGTGTT	G	1402.32	PASS	AB=0.842;AC=9;AF=0.161;AN=56;BaseQRankSum=9.581;DP=637;FS=0.521;HRun=0;HaplotypeScore=127.5838;InbreedingCoeff=0.0899;MQ=47.14;MQ0=62;MQRankSum=-4.226;QD=6.94;ReadPosRankSum=-1.575;VQSLOD=2.2790;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:92.43:0,92,2779	0/0:9,0:7:10.24:0,10,229	0/0:13,0:8:1.01:0,1,223	0/0:9,0:4:12.04:0,12,256	0/0:25,0:20:47.74:0,48,1141	0/1:12,15:22:19.05:580,0,19	0/1:12,12:20:66.54:199,0,67	0/1:42,0:30:99:286,0,143	0/0:19,0:17:36.11:0,36,1075	0/0:35,0:31:77.99:0,78,1808	0/0:10,0:9:20.65:0,21,569	0/0:23,0:17:42.07:0,42,1078	0/0:17,0:13:30.25:0,30,735	0/0:19,0:15:43.66:0,44,1176	0/0:21,0:16:21.30:0,21,759	0/0:16,0:13:27.05:0,27,746	0/0:31,0:31:56.31:0,56,2356	0/0:25,0:21:46.49:0,46,1301	1/1:16,0:11:11.49:79,11,0	0/1:20,0:16:37.04:207,0,37	0/1:34,0:26:22.26:22,0,184	0/0:25,0:23:53.51:0,54,1333	0/0:14,0:13:27.04:0,27,688	0/0:35,0:33:47.23:0,47,1771	0/1:7,10:15:4.05:111,0,4	0/0:30,0:23:62.58:0,63,1661	0/1:21,1:20:61.21:61,0,75	0/0:9,0:8:21:0,21,532
chr10	104851392	.	T	TTGTGTG	2420.51	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=8.033;DP=631;FS=5.086;HRun=0;HaplotypeScore=127.1151;InbreedingCoeff=0.8868;MQ=48.45;MQ0=57;MQRankSum=-5.853;QD=11.69;ReadPosRankSum=-2.524;VQSLOD=2.1266;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:92.95:0,93,1798	0/0:8,0:6:10.27:0,10,159	0/1:15,0:10:0.08:0,0,218	0/0:11,0:6:15.04:0,15,262	0/0:25,0:20:36.07:0,36,690	1/1:24,0:22:31.85:447,32,0	1/1:23,0:20:8.87:50,9,0	1/1:37,0:27:30.95:641,31,0	0/0:20,0:19:38.90:0,39,737	0/0:35,0:31:63.15:0,63,1126	0/0:12,0:12:27.02:0,27,399	0/0:24,0:18:43.61:0,44,792	0/0:16,0:12:25.07:0,25,499	0/0:20,0:17:39.11:0,39,745	0/0:19,0:14:27.07:0,27,493	0/0:13,0:11:21.07:0,21,439	0/0:31,0:31:78.20:0,78,1491	0/0:25,0:22:37.55:0,38,947	1/1:6,11:13:30.03:607,30,0	1/1:17,0:15:24:500,24,0	1/1:30,2:25:6.02:95,6,0	0/0:26,0:24:23.07:0,23,838	0/0:14,0:13:18.06:0,18,369	0/0:37,0:34:64.26:0,64,1106	1/1:16,1:16:9.49:158,9,0	0/0:30,0:24:54.13:0,54,970	1/1:10,13:22:6:114,6,0	0/0:9,0:8:17.99:0,18,324
chr10	104852347	.	A	AT	3214.31	PASS	AB=0.875;AC=17;AF=0.304;AN=56;BaseQRankSum=-9.054;DP=396;FS=12.863;HRun=2;HaplotypeScore=30.8822;InbreedingCoeff=0.8865;MQ=78.74;MQ0=7;MQRankSum=-1.898;QD=25.51;ReadPosRankSum=1.800;VQSLOD=1.7598;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.19:0,60,743	0/1:6,1:7:22.12:22,0,202	0/0:20,0:14:42.12:0,42,510	0/0:18,0:10:27.05:0,27,318	0/0:18,0:18:51.12:0,51,603	1/1:0,15:12:27.09:388,27,0	1/1:2,11:10:27.09:388,27,0	1/1:8,17:17:30.07:380,30,0	0/0:14,0:14:42.12:0,42,507	0/0:15,0:15:45.14:0,45,557	0/0:14,0:14:42.10:0,42,493	0/0:15,0:15:45.14:0,45,557	0/0:10,0:9:27.07:0,27,322	0/0:14,0:14:39.12:0,39,483	0/0:12,0:12:36.11:0,36,446	0/0:8,0:8:24.06:0,24,285	0/0:17,0:17:51.16:0,51,632	0/0:11,0:11:33.10:0,33,409	1/1:1,10:10:24.08:345,24,0	1/1:1,9:7:18.06:259,18,0	1/1:1,22:23:60.20:859,60,0	0/0:20,0:20:60.18:0,60,731	0/0:13,0:13:39.12:0,39,483	0/0:14,0:14:42.10:0,42,503	1/1:0,5:3:6.02:86,6,0	0/0:14,0:14:36.10:0,36,436	1/1:0,17:16:48.16:690,48,0	0/0:3,0:3:9.03:0,9,111
chr10	104852460	.	CTA	C	700.22	PASS	AC=16;AF=0.320;AN=50;BaseQRankSum=5.066;DP=232;FS=0.889;HRun=0;HaplotypeScore=45.3287;InbreedingCoeff=0.6760;MQ=87.04;MQ0=5;MQRankSum=-2.793;QD=9.86;ReadPosRankSum=-2.035;VQSLOD=2.7934;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:9.03:0,9,149	0/0:3,0:3:6.02:0,6,99	0/0:21,0:11:3.39:0,3,74	0/0:23,1:14:6.99:0,7,65	0/0:13,0:13:18.06:0,18,297	1/1:9,0:9:2.96:19,3,0	1/1:3,0:3:2.94:18,3,0	1/1:8,12:15:24.08:300,24,0	0/0:6,0:6:3.01:0,3,50	0/0:15,0:15:21.07:0,21,347	./.	0/0:3,0:3:3.01:0,3,50	0/0:5,0:5:6.02:0,6,99	0/0:6,0:6:9.03:0,9,149	0/0:5,0:5:6.02:0,6,99	0/0:2,0:2:3.01:0,3,50	0/0:15,0:15:39.11:0,39,616	0/0:6,0:6:15.03:0,15,221	1/1:3,4:7:12.04:150,12,0	1/1:2,4:6:12.04:150,12,0	1/1:1,1:2:6:61,6,0	./.	0/0:6,0:6:15.02:0,15,198	./.	1/1:18,0:18:8.64:60,9,0	0/0:9,0:9:18.06:0,18,295	1/1:3,3:6:9.03:109,9,0	0/0:7,0:7:15.05:0,15,225
chr10	104852493	.	TGA	T	411.01	PASS	AB=0.982;AC=15;AF=0.300;AN=50;BaseQRankSum=4.767;DP=173;FS=5.827;HRun=0;HaplotypeScore=32.9217;InbreedingCoeff=0.5064;MQ=59.55;MQ0=14;MQRankSum=-5.705;QD=4.62;ReadPosRankSum=0.090;VQSLOD=0.6541;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:7:18.04:0,18,313	0/0:1,0:1:3.01:0,3,39	0/0:20,0:5:4.17:0,4,16	0/1:54,0:9:3.35:6,0,3	0/0:2,0:2:6.02:0,6,122	1/1:2,1:3:3.01:37,3,0	1/1:1,1:2:3.01:35,3,0	1/1:2,6:8:21.05:259,21,0	0/0:3,0:2:6.02:0,6,106	0/0:3,0:3:9.03:0,9,164	0/0:1,0:1:3.01:0,3,50	0/0:2,0:2:6.02:0,6,122	0/0:3,0:3:9.01:0,9,127	0/0:3,0:2:6.02:0,6,113	0/0:2,0:2:6.02:0,6,105	0/0:1,0:1:3.01:0,3,61	0/0:17,0:16:29.67:0,30,513	0/0:9,0:9:27.09:0,27,444	1/1:0,1:1:3.01:41,3,0	1/1:1,0:1:3.01:46,3,0	./.	./.	0/0:1,0:1:3.01:0,3,51	./.	1/1:13,3:16:9.97:113,10,0	0/0:4,0:4:12.03:0,12,203	1/1:1,1:2:2.98:22,3,0	0/0:3,0:2:6.02:0,6,99
chr10	104852494	.	GAATATAT	G	140.33	PASS	AB=0.820;AC=8;AF=0.160;AN=50;BaseQRankSum=3.857;DP=174;FS=3.421;HRun=0;HaplotypeScore=42.4669;InbreedingCoeff=0.2607;MQ=56.61;MQ0=14;MQRankSum=-2.899;QD=4.68;ReadPosRankSum=2.193;VQSLOD=1.2078;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:8:21.07:0,21,570	0/0:1,0:1:3.01:0,3,87	0/0:18,0:5:8.32:0,8,54	0/0:54,0:8:7.18:0,7,43	0/0:3,0:3:9.03:0,9,286	1/1:1,1:3:3.01:48,3,0	0/0:2,0:2:1.82:0,2,5	0/1:8,0:8:7.76:14,0,8	0/0:3,0:2:6.02:0,6,215	0/0:3,0:3:9.03:0,9,195	0/0:1,0:1:3.01:0,3,123	0/0:2,0:2:6.02:0,6,246	0/0:3,0:3:9.02:0,9,175	0/0:3,0:2:6.02:0,6,155	0/0:2,0:2:6.02:0,6,80	0/0:1,0:1:3.01:0,3,123	0/0:19,0:18:51.10:0,51,1176	0/0:9,0:9:24.03:0,24,685	0/0:1,0:1:0.47:0,0,1	1/1:1,0:1:1.82:5,2,0	./.	./.	0/0:1,0:1:3.01:0,3,40	./.	0/1:7,6:16:71.68:140,0,72	0/0:4,0:4:12.04:0,12,339	1/1:2,0:2:3.01:43,3,0	0/0:3,0:2:6.02:0,6,134
chr10	104852511	.	TATATATAGAGAG	T	409.90	PASS	AB=1.000;AC=7;AF=0.135;AN=52;BaseQRankSum=3.332;DP=185;FS=1.177;HRun=0;HaplotypeScore=58.8961;InbreedingCoeff=0.3804;MQ=69.50;MQ0=10;MQRankSum=-3.693;QD=14.13;ReadPosRankSum=1.194;VQSLOD=1.4058;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:33.11:0,33,1189	0/0:2,0:2:3.01:0,3,115	0/0:14,0:5:0.47:0,0,1	0/0:48,0:11:13.79:0,14,89	0/0:5,0:5:15.05:0,15,693	1/1:6,1:7:12.04:211,12,0	1/1:4,0:4:2.80:52,3,0	0/0:9,0:8:1.73:0,2,443	0/0:4,0:3:9.02:0,9,209	0/0:2,0:2:6.02:0,6,127	0/0:2,0:2:6.02:0,6,157	0/0:3,0:3:9.03:0,9,423	0/0:2,0:2:6.02:0,6,234	0/0:2,0:1:3.01:0,3,74	0/0:3,0:3:9.03:0,9,289	0/0:1,0:1:3.01:0,3,163	0/0:21,0:20:56.80:0,57,1820	0/0:10,0:10:27.09:0,27,1231	0/0:2,0:2:1.02:0,1,26	0/0:1,0:1:3:0,3,29	./.	0/0:1,0:1:3.01:0,3,75	./.	0/0:3,0:3:9.03:0,9,225	1/1:13,3:16:13.22:259,13,0	0/0:4,0:4:12.04:0,12,482	0/1:2,0:2:10.87:11,0,20	0/0:4,0:4:12.01:0,12,282
chr10	104852517	.	TAGAGAG	T	205.96	PASS	AB=0.800;AC=7;AF=0.130;AN=54;BaseQRankSum=1.461;DP=226;FS=1.667;HRun=0;HaplotypeScore=53.2945;InbreedingCoeff=0.4182;MQ=72.70;MQ0=8;MQRankSum=-1.954;QD=7.36;ReadPosRankSum=0.498;VQSLOD=1.0475;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:39.12:0,39,1029	0/0:0,0:2:3.01:0,3,39	0/0:22,0:6:0:0,0,0	0/0:45,0:11:11.09:0,11,82	0/0:5,0:5:15.05:0,15,441	1/1:6,1:7:9.03:173,9,0	1/1:1,3:4:2.94:52,3,0	0/0:15,0:14:33.11:0,33,863	0/0:4,0:4:9:0,9,135	0/0:3,0:3:6.01:0,6,63	0/0:4,0:4:12:0,12,160	0/0:5,0:5:12.04:0,12,346	0/0:5,0:5:12.04:0,12,316	./.	0/0:6,0:6:18.06:0,18,447	0/0:1,0:1:3.01:0,3,85	0/0:23,0:22:51.12:0,51,1108	0/0:12,0:12:36.06:0,36,976	0/0:3,0:3:6.01:0,6,56	1/1:1,0:1:2.88:15,3,0	0/0:3,0:3:6:0,6,52	0/0:2,0:2:6.02:0,6,150	0/0:3,0:3:6.02:0,6,150	0/0:7,0:7:12.04:0,12,297	0/1:12,4:16:19.11:83,0,19	0/0:5,0:5:12.04:0,12,304	0/0:3,0:3:8.84:0,9,66	0/0:2,0:2:6.02:0,6,185
chr10	104853113	.	GA	G	3534.88	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.497;DP=629;FS=1.767;HRun=5;HaplotypeScore=58.3309;InbreedingCoeff=0.9998;MQ=67.91;MQ0=1;MQRankSum=-0.333;QD=28.74;ReadPosRankSum=0.404;VQSLOD=3.7788;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.28:0,96,1257	0/0:10,0:10:30.09:0,30,394	0/0:25,0:25:59.40:0,59,763	0/0:28,0:28:68.82:0,69,896	0/0:27,0:27:78.25:0,78,1044	0/0:26,0:26:69.22:0,69,922	0/0:21,0:21:60.19:0,60,798	1/1:3,31:33:90.22:995,90,0	0/0:21,0:21:54.16:0,54,704	0/0:29,0:29:87.28:0,87,1170	0/0:22,0:22:63.20:0,63,842	0/0:17,0:16:45.14:0,45,598	0/0:20,0:20:54.16:0,54,706	0/0:16,0:16:48.12:0,48,593	0/0:13,0:13:39.10:0,39,487	0/0:15,0:15:42.14:0,42,571	0/0:30,0:30:87.28:0,87,1167	0/0:28,0:26:81.21:0,81,1063	1/1:1,17:15:45.12:501,45,0	1/1:0,21:21:63.18:714,63,0	1/1:0,25:24:60.17:679,60,0	0/0:23,0:23:63.19:0,63,833	0/0:26,0:26:75.24:0,75,1003	0/0:13,0:13:36.07:0,36,429	0/0:23,0:23:63.20:0,63,830	0/0:25,0:25:66.21:0,66,884	1/1:2,23:24:57.16:645,57,0	0/0:16,0:16:48.13:0,48,620
chr10	104854768	.	G	GTCATTCATTCATTCATTCAT	6707.82	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=2.380;DP=691;FS=5.014;HRun=0;HaplotypeScore=311.3169;InbreedingCoeff=0.9618;MQ=54.18;MQ0=7;MQRankSum=-8.981;QD=43.56;ReadPosRankSum=-5.154;VQSLOD=2.7609;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:99:0,99,4411	1/1:8,0:12:9.03:303,9,0	0/0:24,0:9:18.06:0,18,602	0/0:28,0:15:24.08:0,24,781	0/0:27,0:27:57.02:0,57,2721	0/0:19,0:19:45.15:0,45,2085	0/0:26,0:26:15.05:0,15,704	1/1:40,0:34:37.66:1491,38,0	0/0:16,0:16:18.05:0,18,708	0/0:27,0:27:54.17:0,54,2166	0/0:19,0:19:45.14:0,45,1835	0/0:22,0:22:33.11:0,33,1533	0/0:13,0:13:21.07:0,21,928	0/0:35,0:34:66.21:0,66,3037	0/0:26,0:26:54.17:0,54,2321	0/0:17,0:17:33.10:0,33,1531	0/0:24,0:24:45.15:0,45,2311	0/0:13,0:13:24.08:0,24,1275	1/1:22,0:18:9.03:287,9,0	1/1:15,2:12:15.05:650,15,0	1/1:25,0:25:17.39:542,17,0	0/0:28,0:28:48.15:0,48,2214	0/0:18,0:18:39.13:0,39,1956	0/0:40,0:40:78.27:0,78,3766	0/0:19,0:18:21.05:0,21,981	0/0:31,0:31:63.21:0,63,2852	1/1:25,2:30:42.14:3435,42,0	0/0:16,0:16:39.13:0,39,1939
chr10	104854919	.	TTG	T	38.80	PASS	AB=0.914;AC=9;AF=0.173;AN=52;BaseQRankSum=3.410;DP=635;FS=6.084;HRun=0;HaplotypeScore=80.7065;InbreedingCoeff=0.3740;MQ=50.00;MQ0=47;MQRankSum=-0.747;QD=0.30;ReadPosRankSum=1.001;VQSLOD=0.4355;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:40:26.22:0,26,465	0/0:18,0:16:1.24:0,1,228	./.	./.	0/0:23,0:23:11.03:0,11,74	0/0:24,0:23:22.02:0,22,284	0/0:16,0:15:6:0,6,66	0/0:40,0:25:1.25:0,1,3	0/0:14,0:15:14.30:0,14,215	0/0:27,0:27:23.05:0,23,245	0/0:15,0:15:15.36:0,15,141	0/0:12,0:11:8.61:0,9,77	0/1:17,0:17:0.06:0,0,146	0/0:23,1:22:13.92:0,14,201	0/0:24,0:23:27.09:0,27,397	0/0:22,1:23:24.06:0,24,306	0/0:40,1:41:27.19:0,27,647	0/0:18,0:16:23.66:0,24,292	1/1:15,0:9:4.56:15,5,0	0/0:10,3:9:3.01:0,3,45	0/1:30,11:36:17.95:27,0,18	0/0:26,0:26:25:0,25,303	0/1:20,1:21:40.17:40,0,159	0/0:31,2:33:14.02:0,14,509	0/0:15,0:23:23.78:0,24,258	1/1:15,2:14:6.89:47,7,0	1/1:17,1:17:3.01:33,3,0	0/0:4,0:4:8.99:0,9,108
chr10	104855133	.	T	TTG	332.89	PASS	AB=0.874;AC=7;AF=0.146;AN=48;BaseQRankSum=-0.993;DP=561;FS=10.050;HRun=0;HaplotypeScore=88.1905;InbreedingCoeff=0.2374;MQ=49.73;MQ0=37;MQRankSum=0.084;QD=2.38;ReadPosRankSum=-0.071;VQSLOD=1.1712;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,12:39:13.26:73,0,13	1/1:5,0:8:3:26,3,0	./.	./.	0/0:16,1:19:11.86:0,12,112	0/0:2,0:1:2.37:0,2,8	./.	./.	0/0:21,0:21:26.81:0,27,268	0/0:19,0:14:6.01:0,6,64	0/0:12,0:12:5.26:0,5,34	0/0:24,0:23:34.22:0,34,359	0/0:16,0:18:23.50:0,24,205	0/0:22,0:21:23.72:0,24,223	0/0:28,0:29:36.50:0,36,351	0/1:13,18:30:36.09:329,0,36	0/0:24,0:25:33.06:0,33,322	0/0:26,0:23:20.49:0,20,283	0/0:22,0:17:8.69:0,9,61	0/0:13,0:12:8.33:0,8,50	0/1:30,0:24:1.18:7,0,1	0/0:18,0:17:8.68:0,9,70	0/0:25,0:26:20.44:0,20,164	0/0:27,0:29:38.66:0,39,341	0/1:3,0:3:0:0,0,0	0/0:25,0:21:4.58:0,5,178	0/1:25,0:19:0.52:1,0,44	0/0:6,0:7:11.86:0,12,104
chr10	104855157	.	GTGTGTGTGTGTGTGTA	G	1433.37	PASS	AB=0.822;AC=8;AF=0.148;AN=54;BaseQRankSum=4.463;DP=618;FS=0.000;HRun=0;HaplotypeScore=190.3387;InbreedingCoeff=0.1993;MQ=47.58;MQ0=48;MQRankSum=-5.337;QD=12.36;ReadPosRankSum=-0.449;VQSLOD=2.3518;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:39:45.13:0,45,2458	0/0:6,0:6:3.01:0,3,213	0/0:20,0:2:6:0,6,58	0/0:29,0:9:26.79:0,27,234	0/0:20,0:20:35.99:0,36,2345	1/1:2,0:1:1.25:3,1,0	./.	0/1:21,0:13:71.70:123,0,72	0/0:31,0:31:63.22:0,63,2625	0/0:27,0:22:54.04:0,54,2168	0/0:18,0:18:24.05:0,24,1138	0/0:26,0:25:60.08:0,60,3234	0/0:15,0:14:30.09:0,30,1739	0/0:23,0:22:48.03:0,48,2552	0/0:29,0:29:61.12:0,61,3673	0/0:36,0:33:59.93:0,60,2817	0/0:25,0:25:53.37:0,53,2826	0/0:28,0:23:52.06:0,52,2947	0/1:12,8:12:75.01:399,0,75	0/1:15,1:11:99:281,0,171	1/1:16,15:26:6.52:285,7,0	0/0:29,0:27:42.11:0,42,2067	0/0:23,0:23:38.97:0,39,1950	0/0:28,0:29:63.58:0,64,3104	0/0:4,0:4:3.01:0,3,145	0/0:32,0:27:75.15:0,75,3385	0/1:11,15:21:99:466,0,135	0/0:7,0:6:12.04:0,12,734
chr10	104855171	.	GTA	G	443.16	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=5.414;DP=609;FS=12.848;HRun=0;HaplotypeScore=87.9458;InbreedingCoeff=0.4833;MQ=50.57;MQ0=23;MQRankSum=-1.311;QD=3.57;ReadPosRankSum=-1.161;VQSLOD=1.2716;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:40:12.04:0,12,429	0/0:8,0:8:11.92:0,12,100	0/0:31,0:12:29.60:0,30,221	0/0:40,0:24:62.33:0,62,476	0/0:22,0:22:29.15:0,29,497	0/0:3,0:2:0.47:0,0,1	./.	1/1:2,9:9:23.94:193,24,0	0/0:34,0:34:79.74:0,80,778	0/0:22,0:20:40.40:0,40,480	0/0:15,0:15:26.80:0,27,292	0/0:24,0:23:46.79:0,47,649	0/0:16,0:15:14.58:0,15,289	0/0:27,0:26:47.45:0,47,537	0/0:27,0:27:22.90:0,23,658	0/0:37,0:34:65.40:0,65,689	0/0:24,0:24:37.65:0,38,590	0/0:26,0:23:26.09:0,26,571	0/1:14,0:9:7.14:85,0,7	1/1:18,0:14:3.74:220,4,0	1/1:20,0:16:5.84:35,6,0	0/0:31,0:29:11.04:0,11,451	0/0:25,0:25:10.59:0,11,456	0/0:28,0:29:13.44:0,13,521	0/1:4,0:4:0:0,0,0	0/1:30,0:28:1.55:2,0,617	0/1:20,0:18:16.93:42,0,17	0/1:7,0:6:2.97:3,0,83
chr10	104857550	.	GA	G	1199.69	PASS	AB=0.697;AC=7;AF=0.130;AN=54;BaseQRankSum=9.470;DP=808;FS=4.017;HRun=1;HaplotypeScore=65.9544;InbreedingCoeff=-0.1653;MQ=46.67;MQ0=104;MQRankSum=-3.901;QD=4.04;ReadPosRankSum=0.947;VQSLOD=0.5271;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:40:48.15:0,48,743	0/0:10,0:10:14.98:0,15,240	0/0:33,0:3:6.49:0,6,97	./.	0/0:27,0:25:48.16:0,48,764	0/1:13,11:20:17.70:18,0,312	0/1:22,16:23:99:101,0,215	0/1:23,14:15:47.74:48,0,443	0/0:31,0:28:42.14:0,42,670	0/0:33,0:30:90.27:0,90,1412	0/0:24,0:23:51.17:0,51,814	0/0:20,0:19:30.10:0,30,480	0/0:22,0:22:42.01:0,42,671	0/0:23,0:21:36.12:0,36,575	0/0:24,0:22:42.14:0,42,671	0/0:25,0:24:36.11:0,36,575	0/0:25,0:22:39.12:0,39,600	0/0:17,0:14:6:0,6,71	0/1:31,18:29:99:436,0,636	0/1:24,20:39:99:265,0,649	0/1:41,30:55:98.44:98,0,236	0/0:25,0:23:51.17:0,51,814	0/0:20,0:18:33.10:0,33,504	0/0:17,0:13:12.04:0,12,191	0/1:15,19:30:99:362,0,374	0/0:27,0:23:66.22:0,66,1035	0/0:25,5:26:54.18:0,54,863	0/0:8,0:7:6.02:0,6,96
chr10	104858149	.	C	CCA	3408.81	PASS	AB=0.600;AC=5;AF=0.089;AN=56;BaseQRankSum=-11.837;DP=877;FS=9.078;HRun=0;HaplotypeScore=92.7047;InbreedingCoeff=0.8104;MQ=61.05;MQ0=13;MQRankSum=0.250;QD=30.71;ReadPosRankSum=1.384;VQSLOD=5.4997;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,159,2101	0/0:11,0:11:33.11:0,33,445	0/0:35,0:19:42.12:0,42,540	0/0:36,0:21:39.22:0,39,660	0/0:36,0:36:93.26:0,93,1205	1/1:6,24:29:28.78:1116,29,0	1/1:18,26:44:69.24:1209,69,0	0/0:41,0:41:99:0,108,1381	0/0:22,0:22:60.18:0,60,793	0/0:33,0:33:84.27:0,84,1136	0/0:16,0:16:45.15:0,45,607	0/0:22,0:22:57.19:0,57,770	0/0:31,0:31:90.25:0,90,1177	0/0:18,0:18:51.16:0,51,674	0/0:39,0:39:99:0,102,1351	0/0:30,0:30:78.24:0,78,1038	0/0:32,0:32:87.25:0,87,1142	0/0:22,0:22:57.19:0,57,771	0/0:38,0:35:94.17:0,94,1231	0/0:25,0:24:51.14:0,51,658	0/0:57,0:48:93.30:0,93,1242	0/0:24,0:24:57.13:0,57,733	0/0:36,0:35:81.27:0,81,1094	0/0:32,0:32:90.29:0,90,1201	0/1:12,23:31:8.64:1084,0,9	0/0:33,0:33:93.29:0,93,1228	0/0:31,0:31:78.19:0,78,1000	0/0:11,0:11:33.09:0,33,426
chr10	104861211	.	GACACACAC	G	1397.14	PASS	AB=0.922;AC=9;AF=0.188;AN=48;BaseQRankSum=2.029;DP=510;FS=2.768;HRun=0;HaplotypeScore=129.6069;InbreedingCoeff=0.1467;MQ=48.76;MQ0=45;MQRankSum=-0.208;QD=10.92;ReadPosRankSum=-0.940;VQSLOD=2.1305;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:31:31.46:0,31,857	1/1:0,0:3:3.01:55,3,0	./.	0/0:36,0:14:3.01:0,3,71	0/0:19,0:18:21:0,21,668	./.	./.	0/1:22,3:20:99:345,0,139	0/0:20,0:18:17.99:0,18,504	0/0:23,0:22:48.16:0,48,1426	0/0:13,0:12:12.04:0,12,369	0/0:13,0:12:15.05:0,15,442	0/0:8,0:8:21.05:0,21,459	0/0:24,0:23:37.01:0,37,922	0/0:12,0:10:18.53:0,19,539	0/0:18,0:16:30.10:0,30,724	0/0:33,0:31:66.23:0,66,1753	0/1:17,0:17:11.73:12,0,653	0/1:15,0:11:18.40:437,0,18	0/1:14,1:12:63.98:74,0,64	0/1:30,1:27:45.14:533,0,45	0/0:12,0:11:15.05:0,15,407	0/0:14,0:12:12.04:0,12,350	0/0:38,0:36:53.51:0,54,1456	./.	0/0:23,0:17:39.13:0,39,1100	1/1:12,5:16:3.01:70,3,0	0/0:12,0:8:18.06:0,18,519
chr10	104861231	.	CACACACACAG	C	1455.65	PASS	AB=0.942;AC=8;AF=0.167;AN=48;BaseQRankSum=2.170;DP=430;FS=1.582;HRun=0;HaplotypeScore=114.4719;InbreedingCoeff=-0.0090;MQ=43.07;MQ0=49;MQRankSum=-0.028;QD=13.48;ReadPosRankSum=-1.092;VQSLOD=2.2262;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:29:37.46:0,37,946	1/1:3,0:3:3.01:55,3,0	./.	0/0:25,0:4:3.01:0,3,71	0/0:19,0:17:23.82:0,24,709	./.	./.	0/1:13,0:9:99:345,0,139	0/0:14,0:12:20.99:0,21,550	0/0:22,0:19:56.07:0,56,1519	0/0:6,0:5:12.04:0,12,369	0/0:9,0:8:18.05:0,18,467	0/0:9,0:9:23.85:0,24,531	0/0:18,0:17:37.01:0,37,923	0/0:12,0:9:21.54:0,22,607	0/0:15,0:13:13.65:0,14,727	0/0:29,0:27:69.22:0,69,1804	0/1:19,0:16:11.73:12,0,673	0/1:7,8:13:44.02:457,0,44	0/1:15,0:11:63.36:94,0,63	0/1:25,0:20:99:524,0,109	0/0:15,0:11:15.05:0,15,407	0/0:10,0:8:12.04:0,12,350	0/0:32,0:29:56.19:0,56,1545	./.	0/0:24,0:17:48.13:0,48,1247	0/1:18,0:16:42.61:96,0,43	0/0:13,0:8:18.06:0,18,519
chr10	104861330	.	A	AC	1591.78	PASS	AC=10;AF=0.200;AN=50;BaseQRankSum=-1.349;DP=443;FS=1.809;HRun=8;HaplotypeScore=70.6551;InbreedingCoeff=0.9811;MQ=73.91;MQ0=3;MQRankSum=-1.109;QD=18.73;ReadPosRankSum=-0.927;VQSLOD=3.3388;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:48.02:0,48,439	0/0:8,0:8:18.01:0,18,164	0/0:30,0:27:23.88:0,24,402	0/0:28,1:23:41.63:0,42,361	0/0:13,0:13:33.02:0,33,302	./.	./.	1/1:7,18:24:38.58:410,39,0	0/0:13,0:13:30.01:0,30,274	0/0:18,0:18:48.02:0,48,437	0/0:14,0:14:36.02:0,36,329	0/0:19,0:19:57.03:0,57,521	0/0:14,0:14:42.02:0,42,382	0/0:17,0:17:45.02:0,45,411	0/0:20,0:20:56.94:0,57,507	0/0:17,0:17:39.01:0,39,357	0/0:14,0:14:39.01:0,39,352	0/0:13,0:13:30.01:0,30,275	1/1:2,11:8:24.06:268,24,0	1/1:3,12:12:26.76:311,27,0	1/1:2,12:14:8.65:353,9,0	0/0:14,0:14:36.01:0,36,326	0/0:13,0:13:32.99:0,33,295	0/0:21,0:21:57.02:0,57,517	./.	0/0:25,0:25:72.03:0,72,655	1/1:1,16:15:36.11:415,36,0	0/0:23,0:23:63.02:0,63,575
chr10	104862937	.	G	GT	4252.41	PASS	AC=10;AF=0.200;AN=50;BaseQRankSum=-11.422;DP=485;FS=3.779;HRun=1;HaplotypeScore=51.0304;InbreedingCoeff=0.9992;MQ=72.13;MQ0=0;MQRankSum=-1.588;QD=39.01;ReadPosRankSum=-1.219;VQSLOD=4.8094;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.19:0,75,939	0/0:8,0:8:24.08:0,24,311	0/0:21,0:21:57.18:0,57,736	0/0:17,0:17:48.15:0,48,603	0/0:25,0:25:63.20:0,63,816	./.	./.	1/1:3,22:24:63.17:884,63,0	0/0:14,0:14:39.13:0,39,505	0/0:19,0:19:51.17:0,51,662	0/0:15,0:15:36.10:0,36,442	0/0:14,0:14:42.09:0,42,525	0/0:13,0:13:33.09:0,33,411	0/0:18,0:18:48.14:0,48,608	0/0:22,0:22:54.16:0,54,687	0/0:15,0:15:39.11:0,39,488	0/0:28,1:29:33.51:0,34,912	0/0:27,0:27:78.22:0,78,993	1/1:1,21:19:51.17:763,51,0	1/1:1,23:21:63.21:943,63,0	1/1:0,19:19:54.18:809,54,0	0/0:18,0:18:51.17:0,51,661	0/0:26,0:26:72.20:0,72,906	0/0:12,0:12:36.12:0,36,467	./.	0/0:26,0:26:78.25:0,78,1012	1/1:0,19:19:57.19:854,57,0	0/0:10,0:10:30.08:0,30,373
chr10	104863248	.	G	GAA	1610.20	PASS	AC=10;AF=0.200;AN=50;BaseQRankSum=-2.955;DP=532;FS=11.341;HRun=9;HaplotypeScore=71.2804;InbreedingCoeff=0.9656;MQ=62.55;MQ0=8;MQRankSum=-4.890;QD=17.69;ReadPosRankSum=-0.428;VQSLOD=0.8679;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:75.17:0,75,798	0/0:8,0:8:21.05:0,21,223	0/0:27,0:10:23.98:0,24,221	0/0:13,0:8:8.57:0,9,99	0/0:28,0:28:71.89:0,72,738	./.	./.	1/1:7,9:10:12:151,12,0	0/0:15,0:15:39.09:0,39,415	0/0:24,0:24:63.15:0,63,671	0/0:23,0:24:68.89:0,69,701	0/0:23,0:23:57.12:0,57,606	0/0:24,0:24:63.12:0,63,663	0/0:15,0:15:39.09:0,39,415	0/0:20,0:20:51.06:0,51,523	0/0:19,0:19:51.11:0,51,535	0/0:42,0:42:99:0,105,1118	0/0:16,0:15:33.02:0,33,341	1/1:6,8:11:21.04:296,21,0	1/1:6,25:25:22.22:727,22,0	1/1:4,5:9:12.04:185,12,0	0/0:16,0:16:45.11:0,45,479	0/0:28,0:28:66.14:0,66,695	0/0:19,0:18:36.03:0,36,371	./.	0/0:31,0:31:74.99:0,75,775	1/1:6,11:13:29.60:417,30,0	0/0:9,0:9:21.05:0,21,224
chr10	104864432	.	GCT	G	552.05	PASS	AB=0.783;AC=2;AF=0.040;AN=50;BaseQRankSum=6.288;DP=643;FS=0.943;HRun=0;HaplotypeScore=56.6744;InbreedingCoeff=-0.0572;MQ=76.27;MQ0=87;MQRankSum=6.663;QD=7.67;ReadPosRankSum=-3.067;VQSLOD=2.4995;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:38:99:0,99,1841	0/0:2,0:2:3.01:0,3,58	0/1:22,12:24:99:387,0,668	0/1:30,8:26:99:252,0,766	0/0:24,0:19:39.13:0,39,750	./.	./.	0/0:32,0:17:42.13:0,42,779	0/0:15,0:15:42.14:0,42,811	0/0:20,0:17:42.14:0,42,794	0/0:20,0:12:18.06:0,18,347	0/0:17,0:14:24.08:0,24,463	0/0:20,0:17:42.13:0,42,775	0/0:21,0:18:48.16:0,48,921	0/0:22,0:22:54.18:0,54,1043	0/0:18,0:17:42.14:0,42,799	0/0:40,1:37:78.25:0,78,1473	0/0:50,0:43:99:0,114,2191	0/0:20,0:11:23.81:0,24,463	0/0:26,0:19:45.15:0,45,868	0/0:25,0:24:69.19:0,69,1294	0/0:15,0:13:18.05:0,18,316	0/0:23,0:16:39.13:0,39,753	0/0:30,0:28:72.25:0,72,1375	./.	0/0:29,0:24:54.18:0,54,1019	0/0:30,0:26:53.91:0,54,1043	0/0:4,0:4:3.01:0,3,58
chr10	104864521	.	TA	T	1959.54	PASS	AC=10;AF=0.200;AN=50;BaseQRankSum=8.881;DP=543;FS=3.289;HRun=8;HaplotypeScore=61.6535;InbreedingCoeff=0.9677;MQ=58.79;MQ0=1;MQRankSum=-3.479;QD=18.14;ReadPosRankSum=-0.536;VQSLOD=3.4585;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:99:0,102,1359	0/0:9,0:9:17.15:0,17,236	0/0:25,0:18:22.25:0,22,334	0/0:22,0:12:10.31:0,10,203	0/0:30,0:30:78.24:0,78,940	./.	./.	1/1:11,28:35:72.10:690,72,0	0/0:17,0:17:45.13:0,45,533	0/0:27,0:27:66.20:0,66,797	0/0:36,0:36:74.32:0,74,926	0/0:7,0:7:21.05:0,21,242	0/0:15,0:13:33.10:0,33,399	0/0:11,0:10:30.08:0,30,353	0/0:20,0:20:49.43:0,49,635	0/0:17,0:17:35.23:0,35,465	0/0:31,1:32:48.34:0,48,880	0/0:27,0:27:69.11:0,69,777	1/1:9,12:20:36.05:348,36,0	1/1:2,16:18:45.02:424,45,0	1/1:2,5:7:15.02:145,15,0	0/0:19,0:19:35.20:0,35,452	0/0:17,0:17:39.11:0,39,459	0/0:22,0:22:48.15:0,48,580	./.	0/0:25,0:25:66.20:0,66,797	1/1:3,20:23:54.09:521,54,0	0/0:5,0:5:9.03:0,9,109
chr10	104864638	.	G	GA	109.45	PASS	AC=2;AF=0.040;AN=50;BaseQRankSum=-2.823;DP=557;FS=2.974;HRun=9;HaplotypeScore=75.5751;InbreedingCoeff=0.7721;MQ=65.24;MQ0=5;MQRankSum=1.670;QD=18.24;ReadPosRankSum=0.519;VQSLOD=3.9392;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:83.78:0,84,710	1/1:0,6:6:18.05:199,18,0	0/0:29,0:18:33.70:0,34,277	0/0:30,0:15:3.64:0,4,168	0/0:27,0:27:67.96:0,68,578	./.	./.	0/0:26,0:23:53.98:0,54,467	0/0:12,1:13:5.81:0,6,279	0/0:27,0:27:50.54:0,51,442	0/0:28,0:28:62.97:0,63,546	0/0:10,0:10:18.46:0,18,157	0/0:20,0:20:35.78:0,36,312	0/0:13,0:13:32.91:0,33,286	0/0:18,0:18:47.96:0,48,410	0/0:20,0:20:47.98:0,48,417	0/0:15,0:15:38.98:0,39,339	0/0:22,1:24:26.79:0,27,461	0/0:10,0:10:29.99:0,30,260	0/0:24,0:24:56.98:0,57,494	0/0:19,0:19:53.99:0,54,469	0/0:19,0:19:50.99:0,51,442	0/0:27,0:27:56.25:0,56,477	0/0:21,0:21:50.98:0,51,443	./.	0/0:39,0:39:99:0,102,882	0/0:30,1:28:68.98:0,69,598	0/0:18,0:18:35.86:0,36,312
chr10	104864662	.	GA	G	2649.08	PASS	AB=1.000;AC=11;AF=0.220;AN=50;BaseQRankSum=7.975;DP=547;FS=5.984;HRun=7;HaplotypeScore=69.5622;InbreedingCoeff=0.8755;MQ=69.63;MQ0=1;MQRankSum=-8.217;QD=18.40;ReadPosRankSum=-1.570;VQSLOD=3.0434;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.21:0,72,891	0/0:6,0:6:15.04:0,15,177	0/1:29,0:20:9.74:10,0,374	0/0:23,0:14:8.30:0,8,270	0/0:28,0:28:66.21:0,66,830	./.	./.	1/1:11,21:30:75.12:742,75,0	0/0:16,0:16:48.15:0,48,604	0/0:27,0:27:72.17:0,72,893	0/0:26,0:26:60.18:0,60,734	0/0:8,0:8:21.07:0,21,264	0/0:20,0:20:45.04:0,45,566	0/0:15,0:15:39.10:0,39,467	0/0:24,0:23:63.20:0,63,792	0/0:19,0:19:42.13:0,42,517	0/0:21,0:21:57.15:0,57,699	0/0:23,0:23:63.64:0,64,766	1/1:2,10:12:30.06:306,30,0	1/1:4,20:24:63.06:632,63,0	1/1:3,17:19:45.10:459,45,0	0/0:19,0:19:42.13:0,42,527	0/0:24,0:23:48:0,48,604	0/0:24,0:23:63.20:0,63,792	./.	0/0:37,0:37:99:0,102,1270	1/1:5,21:25:66.15:672,66,0	0/0:14,0:14:30.10:0,30,374
chr10	104864710	.	G	GA	1930.87	PASS	AB=0.844;AC=11;AF=0.212;AN=52;BaseQRankSum=-2.189;DP=507;FS=4.561;HRun=9;HaplotypeScore=63.5584;InbreedingCoeff=0.6632;MQ=63.22;MQ0=7;MQRankSum=-5.834;QD=12.70;ReadPosRankSum=-2.750;VQSLOD=2.7916;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:54.39:0,54,469	0/0:3,0:3:9:0,9,78	0/1:23,0:14:4.18:4,0,66	0/1:15,1:10:3.76:4,0,115	0/0:21,0:22:47.99:0,48,417	./.	0/0:2,0:2:2.04:0,2,6	1/1:24,13:26:39.11:431,39,0	0/0:14,0:14:38.99:0,39,338	0/0:29,0:29:77.98:0,78,677	0/0:19,0:19:44.03:0,44,372	0/0:15,0:15:41.99:0,42,365	0/0:15,0:15:23.86:0,24,208	0/0:15,0:15:35.91:0,36,312	0/0:21,0:20:47.97:0,48,416	0/0:21,0:21:35.99:0,36,312	0/0:27,1:28:38.83:0,39,565	0/0:32,0:30:74.97:0,75,651	1/1:3,14:15:13.04:365,13,0	1/1:3,13:17:38.94:409,39,0	0/1:6,14:20:16.02:296,0,16	0/0:15,0:16:35.98:0,36,312	0/0:19,0:20:41.97:0,42,364	0/0:19,0:18:41.94:0,42,357	./.	0/0:29,0:29:68.97:0,69,598	1/1:6,15:21:54.10:582,54,0	0/0:6,0:6:11.99:0,12,104
chr10	104865411	.	T	TG	35.77	PASS	AB=0.820;AC=4;AF=0.077;AN=52;BaseQRankSum=3.925;DP=603;FS=13.810;HRun=0;HaplotypeScore=67.2269;InbreedingCoeff=0.3559;MQ=66.73;MQ0=5;MQRankSum=-4.157;QD=0.75;ReadPosRankSum=-2.028;VQSLOD=-0.1233;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:57.18:0,57,779	0/0:13,3:14:39.13:0,39,542	0/0:28,1:23:66.15:0,66,891	0/0:23,0:19:48.10:0,48,614	0/0:12,2:13:30.10:0,30,411	./.	./.	0/0:21,0:19:57.19:0,57,795	0/0:26,1:26:45.09:0,45,589	0/1:17,6:20:89.63:90,0,574	0/0:5,1:6:15.05:0,15,209	0/0:28,1:27:63.20:0,63,865	0/0:23,3:24:21.47:0,21,716	0/0:30,1:30:68.79:0,69,918	0/0:34,1:34:78.26:0,78,1085	0/0:32,1:32:87.29:0,87,1217	0/0:50,0:50:99:0,132,1820	0/0:26,0:26:60.19:0,60,839	0/0:15,1:15:45.13:0,45,611	0/0:22,1:22:63.21:0,63,872	0/0:26,0:26:66.21:0,66,905	0/1:18,4:19:2.60:3,0,542	0/0:13,2:14:36.12:0,36,503	0/0:32,2:32:69.23:0,69,952	1/1:0,3:3:3.01:37,3,0	0/0:14,2:14:42.13:0,42,569	0/0:16,2:16:48.14:0,48,638	0/0:8,0:8:24.08:0,24,336
chr10	104866149	.	TA	T	1652.55	PASS	AC=10;AF=0.200;AN=50;BaseQRankSum=6.020;DP=472;FS=3.763;HRun=10;HaplotypeScore=50.0481;InbreedingCoeff=0.9538;MQ=53.51;MQ0=11;MQRankSum=0.177;QD=15.30;ReadPosRankSum=1.066;VQSLOD=3.8180;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.16:0,63,688	0/0:8,0:8:24.06:0,24,265	0/0:9,0:6:11.07:0,11,152	0/0:6,0:4:9.02:0,9,93	0/0:23,0:23:54.10:0,54,576	./.	./.	1/1:5,24:16:26.99:234,27,0	0/0:15,0:14:27.07:0,27,298	0/0:25,0:26:56.98:0,57,608	0/0:21,0:22:47.96:0,48,512	0/0:18,0:18:42.09:0,42,449	0/0:21,0:20:48.12:0,48,523	0/0:16,0:15:39.06:0,39,418	0/0:3,0:17:43.23:0,43,225	0/0:13,1:13:7.02:0,7,298	0/0:26,0:26:75.20:0,75,829	0/0:32,0:32:81.18:0,81,875	1/1:3,12:10:29.99:260,30,0	1/1:1,19:19:56.99:494,57,0	1/1:1,12:13:32.99:287,33,0	0/0:12,0:12:24.06:0,24,264	0/0:22,0:22:45.12:0,45,498	0/0:9,0:9:18.05:0,18,197	./.	0/0:20,0:19:48.12:0,48,522	1/1:2,24:26:62.99:547,63,0	0/0:10,0:10:30.08:0,30,330
chr10	104867819	.	AC	A	93.63	PASS	AC=2;AF=0.040;AN=50;BaseQRankSum=1.035;DP=477;FS=1.527;HRun=7;HaplotypeScore=64.6077;InbreedingCoeff=0.9541;MQ=51.13;MQ0=9;MQRankSum=0.442;QD=9.36;ReadPosRankSum=-0.909;VQSLOD=1.0806;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.21:0,69,855	1/1:2,8:10:18.04:183,18,0	0/0:15,0:8:11.96:0,12,217	0/0:12,0:8:21.06:0,21,253	0/0:32,0:32:72.22:0,72,890	./.	./.	0/0:34,0:32:82.55:0,83,524	0/0:16,0:16:48.15:0,48,601	0/0:18,0:17:45.14:0,45,565	0/0:16,0:16:42.13:0,42,526	0/0:14,0:14:36.07:0,36,429	0/0:16,0:16:48.11:0,48,583	0/0:16,0:16:36.12:0,36,452	0/0:15,0:15:33.11:0,33,414	0/0:17,0:17:36.12:0,36,452	0/0:25,0:24:57.17:0,57,703	0/0:20,0:19:57.18:0,57,717	0/0:19,0:16:47.33:0,47,315	0/0:17,0:17:44.57:0,45,327	0/0:10,0:9:23.83:0,24,174	0/0:15,0:15:27.09:0,27,339	0/0:16,0:16:39.06:0,39,471	0/0:20,0:19:48.15:0,48,603	./.	0/0:21,0:21:57.18:0,57,704	0/0:35,0:35:95.56:0,96,746	0/0:21,0:21:51.15:0,51,626
chr10	104868870	.	TCCCCAGATG	T	106.07	PASS	AC=2;AF=0.043;AN=46;BaseQRankSum=2.967;DP=565;FS=5.948;HRun=0;HaplotypeScore=169.7473;InbreedingCoeff=0.6681;MQ=61.51;MQ0=11;MQRankSum=-0.975;QD=21.21;ReadPosRankSum=-0.438;VQSLOD=2.7337;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,187,8087	0/0:12,0:12:36.12:0,36,1761	0/0:35,0:29:87.30:0,87,3762	0/0:32,0:31:65.94:0,66,3429	0/0:27,0:27:78.27:0,78,3507	./.	./.	0/0:7,4:5:3.01:0,3,127	0/0:28,0:28:84.29:0,84,4050	0/0:27,0:27:78.26:0,78,3486	0/0:16,0:16:45.15:0,45,2206	0/0:27,0:27:78.25:0,78,3510	0/0:20,0:20:60.21:0,60,2598	0/0:31,0:31:90.29:0,90,4098	0/0:20,0:20:60.21:0,60,2765	0/0:23,0:23:63.22:0,63,2767	0/0:42,0:42:99:0,117,5254	0/0:41,0:41:99:0,114,5191	0/0:3,2:3:6.02:0,6,234	./.	./.	0/0:23,0:23:66.23:0,66,3192	0/0:12,0:12:33.11:0,33,1459	0/0:33,0:33:93.32:0,93,4323	./.	0/0:21,0:21:63.19:0,63,2812	1/1:0,5:4:6.02:185,6,0	0/0:9,0:9:27.09:0,27,1264
chr10	104870033	.	G	GTA	171.30	PASS	AB=0.615;AC=1;AF=0.024;AN=42;BaseQRankSum=3.384;DP=750;FS=22.505;HRun=0;HaplotypeScore=37.0811;InbreedingCoeff=-0.0948;MQ=49.11;MQ0=76;MQRankSum=-1.794;QD=10.71;ReadPosRankSum=-1.465;VQSLOD=1.3836;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:12.02:0,12,152	0/0:12,0:11:9.03:0,9,129	0/0:40,0:7:21.07:0,21,297	0/0:32,0:5:9.03:0,9,123	0/0:27,0:25:24.08:0,24,344	./.	./.	0/0:13,0:2:6.02:0,6,84	0/0:48,0:45:5.67:0,6,86	0/0:47,0:43:99:0,120,1715	0/0:25,0:25:33.11:0,33,473	./.	0/0:34,0:34:2.80:0,3,25	0/0:39,0:38:3.01:0,3,43	0/0:59,0:56:6.02:0,6,86	0/0:42,0:41:9.03:0,9,129	0/0:19,0:18:6.02:0,6,86	./.	./.	0/1:6,10:12:99:244,0,144	./.	0/0:37,0:36:30.10:0,30,430	0/0:30,0:29:21.07:0,21,301	0/0:28,0:26:3.01:0,3,43	./.	0/0:43,0:39:99:0,111,1553	0/0:17,0:6:9.03:0,9,129	0/0:13,0:12:3.01:0,3,43
chr10	104871053	.	G	GGA	771.54	PASS	AB=0.826;AC=4;AF=0.080;AN=50;BaseQRankSum=7.999;DP=670;FS=2.749;HRun=0;HaplotypeScore=78.3480;InbreedingCoeff=-0.1066;MQ=51.60;MQ0=25;MQRankSum=-4.958;QD=5.18;ReadPosRankSum=-1.277;VQSLOD=2.4334;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:43:60.18:0,60,806	0/0:14,0:14:30.10:0,30,412	0/0:34,0:5:4.53:0,5,80	0/0:20,0:4:2.19:0,2,67	0/0:18,0:16:21.07:0,21,288	./.	./.	0/1:32,3:31:28.98:29,0,777	0/0:27,0:27:60.20:0,60,823	0/0:22,0:22:57.19:0,57,776	0/0:11,0:10:9.03:0,9,124	0/0:31,0:31:66.21:0,66,901	0/0:31,0:31:68.95:0,69,938	0/0:24,0:24:45.15:0,45,618	0/0:33,0:32:81.23:0,81,1064	0/0:24,0:24:63.18:0,63,833	0/0:27,0:27:45.15:0,45,616	0/0:19,0:18:33.07:0,33,431	0/1:25,8:24:98.32:98,0,605	0/1:32,8:28:99:111,0,486	0/0:36,6:34:66.22:0,66,907	0/0:24,0:24:36.11:0,36,478	0/0:19,0:17:33.11:0,33,453	0/0:20,0:20:48.14:0,48,642	./.	0/0:27,0:27:75.24:0,75,1014	0/1:27,14:38:99:640,0,531	0/0:9,0:7:12.04:0,12,165
chr10	104871504	.	AAAC	A	238.10	PASS	AB=0.846;AC=6;AF=0.120;AN=50;BaseQRankSum=5.227;DP=641;FS=12.880;HRun=0;HaplotypeScore=82.5783;InbreedingCoeff=-0.0955;MQ=49.76;MQ0=37;MQRankSum=-3.473;QD=1.29;ReadPosRankSum=-0.828;VQSLOD=0.2681;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:27:57.11:0,57,1176	0/0:11,0:11:18.05:0,18,347	./.	0/1:22,0:4:4.77:5,0,6	0/0:33,0:33:39.13:0,39,803	./.	0/0:1,0:1:3.01:0,3,64	0/1:34,6:25:76.90:77,0,707	0/0:22,0:22:27.01:0,27,559	0/0:35,0:33:96.30:0,96,1994	0/0:24,0:24:36.04:0,36,674	0/0:23,0:23:14.98:0,15,322	0/0:24,0:24:39.05:0,39,768	0/0:20,0:20:15.05:0,15,321	0/0:31,0:30:39.12:0,39,778	0/0:28,0:27:39.11:0,39,728	0/0:25,0:24:48.14:0,48,989	0/0:20,0:19:45.13:0,45,876	0/1:22,7:20:98.80:99,0,370	0/1:19,7:13:31.44:31,0,230	0/1:16,3:16:25.28:25,0,309	0/0:22,0:22:30.03:0,30,597	0/0:18,0:18:15.05:0,15,321	0/0:29,0:28:60.09:0,60,1176	./.	0/0:31,0:30:81.26:0,81,1689	0/1:32,16:40:58.16:118,0,58	0/0:6,0:6:12.04:0,12,254
chr10	104873216	.	G	GT	2698.35	PASS	AC=10;AF=0.200;AN=50;BaseQRankSum=4.262;DP=495;FS=12.483;HRun=7;HaplotypeScore=93.1528;InbreedingCoeff=0.9757;MQ=64.50;MQ0=4;MQRankSum=-1.111;QD=22.12;ReadPosRankSum=-1.765;VQSLOD=1.9948;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:56.99:0,57,540	0/0:6,0:6:12.02:0,12,116	0/0:23,0:16:29.95:0,30,261	0/0:21,0:14:9.06:0,9,144	0/0:29,0:29:65.75:0,66,637	./.	./.	1/1:9,18:22:46.11:574,46,0	0/0:18,0:18:45.03:0,45,434	0/0:17,0:17:45.05:0,45,434	0/0:24,0:24:54.46:0,54,522	0/0:11,0:11:24:0,24,232	0/0:13,0:13:30.02:0,30,289	0/0:13,0:13:29.92:0,30,288	0/0:19,0:19:48.04:0,48,456	0/0:15,0:14:24:0,24,226	0/0:16,0:16:27.01:0,27,260	0/0:23,0:23:54.07:0,54,519	1/1:9,18:25:50.48:632,50,0	1/1:5,22:27:63.14:737,63,0	1/1:11,8:19:19.39:314,19,0	0/0:25,0:25:50.58:0,51,479	0/0:28,0:28:67.94:0,68,611	0/0:17,0:17:41.99:0,42,405	./.	0/0:17,0:17:33:0,33,319	1/1:4,18:21:51.16:612,51,0	0/0:9,0:9:27.04:0,27,261
chr10	104877710	.	GA	G	1697.65	PASS	AC=10;AF=0.200;AN=50;BaseQRankSum=4.952;DP=571;FS=4.343;HRun=10;HaplotypeScore=73.8985;InbreedingCoeff=0.9382;MQ=56.80;MQ0=13;MQRankSum=0.277;QD=14.63;ReadPosRankSum=-1.401;VQSLOD=3.7048;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:63.13:0,63,682	0/0:13,1:16:3.70:0,4,232	0/0:32,1:17:19.89:0,20,141	0/0:39,0:21:20.18:0,20,206	0/0:22,0:24:42:0,42,425	./.	./.	1/1:13,19:24:11.54:398,12,0	0/0:22,0:22:39.09:0,39,423	0/0:28,0:26:56.99:0,57,612	0/0:20,0:19:30.04:0,30,319	0/0:23,0:22:51.13:0,51,557	0/0:17,0:17:48.01:0,48,501	0/0:16,0:16:9.51:0,10,278	0/0:12,0:12:21.06:0,21,232	0/0:11,0:11:21.06:0,21,232	0/0:18,0:18:30.08:0,30,332	0/0:25,0:25:62.86:0,63,682	1/1:3,17:17:50.97:439,51,0	1/1:5,14:15:26.01:214,26,0	1/1:3,14:18:38.02:319,38,0	0/0:17,0:17:27.07:0,27,299	0/0:20,0:19:39.03:0,39,405	0/0:23,0:23:51.14:0,51,564	./.	0/0:45,1:45:85.23:0,85,1160	1/1:2,24:25:56.98:495,57,0	0/0:13,0:12:30.08:0,30,332
chr10	104889200	.	AT	A	1127.79	PASS	AB=1.000;AC=11;AF=0.220;AN=50;BaseQRankSum=5.993;DP=273;FS=3.332;HRun=8;HaplotypeScore=47.9009;InbreedingCoeff=0.8020;MQ=81.39;MQ0=0;MQRankSum=-2.119;QD=16.11;ReadPosRankSum=-2.464;VQSLOD=2.9717;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:45.02:0,45,484	0/0:2,0:2:3.01:0,3,36	0/1:16,0:15:5.74:6,0,111	0/0:13,0:10:5.52:0,6,67	0/0:14,0:14:36.11:0,36,432	./.	./.	1/1:4,6:10:21.03:203,21,0	0/0:10,0:10:24.05:0,24,267	0/0:13,0:13:39.12:0,39,466	0/0:18,0:18:51.14:0,51,604	0/0:5,0:5:12.04:0,12,145	0/0:5,0:5:15.05:0,15,181	0/0:5,0:5:15.05:0,15,181	0/0:15,0:15:39.12:0,39,471	0/0:10,0:10:30.09:0,30,362	0/0:14,0:14:36.11:0,36,433	0/0:5,0:5:15.05:0,15,180	1/1:3,9:12:33.05:319,33,0	1/1:3,13:16:48.07:459,48,0	1/1:3,2:5:9.01:85,9,0	0/0:8,0:8:24.07:0,24,287	0/0:6,0:6:18.06:0,18,217	0/0:4,0:4:9.03:0,9,109	./.	0/0:9,0:9:27.07:0,27,308	1/1:2,8:10:24:223,24,0	0/0:26,0:26:72.22:0,72,868
chr10	104889225	.	AT	A	913.48	PASS	AB=0.861;AC=12;AF=0.240;AN=50;BaseQRankSum=6.855;DP=251;FS=0.000;HRun=10;HaplotypeScore=36.7440;InbreedingCoeff=0.7441;MQ=62.07;MQ0=2;MQRankSum=-2.990;QD=12.69;ReadPosRankSum=-1.649;VQSLOD=2.0657;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:41.90:0,42,442	0/0:2,0:2:6.02:0,6,66	0/0:7,0:6:12.03:0,12,128	0/0:5,0:5:9.01:0,9,90	0/0:8,0:8:12.03:0,12,133	./.	./.	1/1:5,7:10:20.98:182,21,0	0/0:10,0:9:21.06:0,21,232	0/0:14,0:14:33.09:0,33,365	0/0:15,1:16:16.07:0,16,405	0/1:7,1:8:5.01:5,0,170	0/0:6,0:6:18.05:0,18,199	0/0:8,0:8:21:0,21,218	0/0:9,0:9:21.06:0,21,232	0/0:8,0:8:21.06:0,21,232	0/0:14,0:14:39.11:0,39,431	0/1:4,1:5:11:11,0,118	1/1:3,8:11:20.99:182,21,0	1/1:2,14:16:38.99:338,39,0	1/1:1,6:7:18:156,18,0	0/0:7,0:7:21.06:0,21,232	0/0:7,0:7:15.04:0,15,166	0/0:3,0:3:9.02:0,9,99	./.	0/0:13,0:13:33.09:0,33,365	1/1:4,9:13:23.99:208,24,0	0/0:22,0:23:56.99:0,57,612
chr10	104898684	.	CTGGAGAGGA	C	92.79	PASS	AB=0.859;AC=5;AF=0.096;AN=52;BaseQRankSum=3.440;DP=502;FS=14.707;HRun=0;HaplotypeScore=141.5951;InbreedingCoeff=0.2138;MQ=72.24;MQ0=0;MQRankSum=-3.391;QD=1.25;ReadPosRankSum=2.093;VQSLOD=2.1854;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,1:23:66.21:0,66,3196	0/0:9,0:9:17.98:0,18,873	0/0:14,0:14:27.56:0,28,974	0/0:9,0:10:23.65:0,24,430	0/0:21,0:21:60.18:0,60,2698	1/1:0,3:3:3.01:98,3,0	./.	0/0:32,1:32:96.26:0,96,3693	0/0:12,0:12:36.12:0,36,1706	0/0:18,1:19:54.19:0,54,2639	0/0:22,0:22:57.20:0,57,2742	0/0:21,0:21:63.20:0,63,3018	0/1:18,4:20:40.18:40,0,2563	0/1:16,7:20:46.20:46,0,2378	0/1:25,1:26:19.33:19,0,3456	0/0:15,0:15:45.14:0,45,2138	0/0:26,0:26:78.27:0,78,3720	0/0:20,0:20:60.21:0,60,3036	0/0:15,0:14:39.11:0,39,1664	0/0:20,0:20:51.13:0,51,2207	0/0:40,1:40:99:0,120,5734	0/0:19,0:19:51.16:0,51,2413	0/0:18,0:18:45.07:0,45,1866	0/0:21,0:21:60.19:0,60,2831	./.	0/0:23,0:23:69.24:0,69,3483	0/0:19,0:19:57.20:0,57,2678	0/0:7,0:7:21.07:0,21,1046
chr10	104901012	.	A	AC	3964.18	PASS	AC=10;AF=0.200;AN=50;BaseQRankSum=10.959;DP=618;FS=3.075;HRun=0;HaplotypeScore=83.9972;InbreedingCoeff=0.9991;MQ=66.89;MQ0=5;MQRankSum=-5.447;QD=33.88;ReadPosRankSum=0.405;VQSLOD=3.2208;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,105,1458	0/0:15,0:15:30.99:0,31,419	0/0:25,0:20:48.04:0,48,593	0/0:32,0:23:50.53:0,51,607	0/0:23,0:23:48.14:0,48,654	./.	./.	1/1:1,16:13:39.06:547,39,0	0/0:20,0:20:60.19:0,60,822	0/0:24,0:22:57.19:0,57,789	0/0:29,0:29:69.19:0,69,920	0/0:27,0:27:64.22:0,64,1003	0/0:16,0:13:36.11:0,36,502	0/0:13,0:11:30.10:0,30,419	0/0:28,0:24:69.22:0,69,934	0/0:25,0:25:66.21:0,66,905	0/0:35,0:35:99:0,102,1352	0/0:23,0:23:66.22:0,66,919	1/1:3,17:17:51.10:688,51,0	1/1:0,16:16:42.13:637,42,0	1/1:0,35:34:75.25:1131,75,0	0/0:22,0:22:60.06:0,60,752	0/0:15,0:15:33.03:0,33,393	0/0:33,0:33:96.31:0,96,1322	./.	0/0:39,0:39:99:0,117,1568	1/1:1,24:26:66.01:960,66,0	0/0:10,0:10:23.85:0,24,335
chr10	104901883	.	TTC	T	464.58	PASS	AB=0.960;AC=19;AF=0.475;AN=40;BaseQRankSum=0.271;DP=443;FS=24.519;HRun=0;HaplotypeScore=129.2057;InbreedingCoeff=0.0856;MQ=59.84;MQ0=17;MQRankSum=-0.753;QD=2.14;ReadPosRankSum=1.835;VQSLOD=0.8359;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:23:26.87:203,27,0	./.	./.	0/0:31,0:20:0:0,0,0	0/0:19,0:17:6.01:0,6,59	./.	./.	./.	0/1:16,0:16:25.14:25,0,64	0/1:14,0:11:16.05:16,0,37	./.	0/1:15,0:14:28.94:29,0,59	1/1:20,0:20:4.83:18,5,0	0/0:25,0:25:15.46:0,15,141	0/0:17,0:16:11.97:0,12,97	0/1:14,0:14:11.86:12,0,28	0/0:23,0:22:24.56:0,25,221	0/1:19,0:18:24.92:25,0,82	1/1:16,0:16:11.89:94,12,0	./.	1/1:22,0:21:5.57:48,6,0	1/1:13,0:11:2.97:24,3,0	0/0:9,0:5:0:0,0,0	0/1:11,7:18:23.38:23,0,25	./.	0/0:21,0:21:3.01:0,3,30	0/1:13,0:12:4.76:52,0,5	1/1:10,0:10:3:29,3,0
chr10	104902181	.	ATGG	A	144.91	PASS	AB=0.824;AC=2;AF=0.040;AN=50;BaseQRankSum=5.413;DP=524;FS=39.732;HRun=0;HaplotypeScore=88.3974;InbreedingCoeff=-0.0425;MQ=73.27;MQ0=1;MQRankSum=5.366;QD=3.08;ReadPosRankSum=-2.775;VQSLOD=-0.2635;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.30:0,93,2227	0/0:7,0:7:21.07:0,21,504	0/1:11,6:16:99:188,0,411	0/1:27,3:19:44.74:45,0,712	0/0:23,0:23:60.19:0,60,1397	./.	./.	0/0:32,0:32:90.28:0,90,2080	0/0:21,0:21:57.16:0,57,1304	0/0:18,0:18:54.19:0,54,1304	0/0:18,0:18:51.06:0,51,1182	0/0:22,0:22:66.23:0,66,1626	0/0:19,0:19:57.20:0,57,1405	0/0:23,0:23:69.24:0,69,1701	0/0:23,0:23:66.21:0,66,1578	0/0:20,0:20:57.20:0,57,1378	0/0:15,0:15:45.15:0,45,1109	0/0:16,0:16:48.16:0,48,1154	0/0:20,0:19:57.18:0,57,1329	0/0:27,0:27:81.28:0,81,1872	0/0:38,0:38:99:0,114,2774	0/0:12,0:12:36.12:0,36,883	0/0:18,0:18:54.19:0,54,1330	0/0:25,0:25:72.25:0,72,1775	./.	0/0:24,0:24:72.25:0,72,1719	0/0:19,0:19:57.20:0,57,1400	0/0:6,0:6:15.05:0,15,369
chr10	104904022	.	T	TATAC	3585.78	PASS	AC=24;AF=0.480;AN=50;BaseQRankSum=-6.540;DP=319;FS=6.444;HRun=0;HaplotypeScore=59.7179;InbreedingCoeff=0.8738;MQ=65.37;MQ0=4;MQRankSum=1.177;QD=26.56;ReadPosRankSum=1.660;VQSLOD=2.5678;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,6:20:17.38:625,17,0	0/0:6,0:6:12.04:0,12,200	0/0:11,0:9:6.02:0,6,80	0/0:14,0:6:2.60:0,3,10	1/1:4,6:10:18.06:336,18,0	./.	./.	0/0:37,0:34:69.11:0,69,960	1/1:3,6:9:12.04:296,12,0	0/0:13,0:13:33.11:0,33,549	0/0:9,0:9:18.05:0,18,275	1/1:1,12:13:12.04:296,12,0	1/1:5,6:11:12.04:282,12,0	1/1:3,7:10:6.02:130,6,0	1/1:1,7:8:15.05:370,15,0	0/0:10,0:10:30.10:0,30,498	1/1:5,11:17:15.05:370,15,0	1/1:5,10:17:17.65:363,18,0	0/0:13,0:13:20.96:0,21,316	0/0:18,0:17:36.03:0,36,544	0/0:8,0:8:18.04:0,18,274	1/1:5,3:8:9.03:149,9,0	1/1:3,4:7:6.02:148,6,0	1/1:1,4:5:9.03:222,9,0	./.	0/0:21,0:21:42.12:0,42,633	0/0:13,0:13:30.05:0,30,438	0/0:8,0:8:15.05:0,15,250
chr10	104904050	.	TATAC	T	1957.26	PASS	AB=0.981;AC=12;AF=0.240;AN=50;BaseQRankSum=-1.070;DP=265;FS=12.700;HRun=0;HaplotypeScore=62.9083;InbreedingCoeff=0.6767;MQ=57.20;MQ0=5;MQRankSum=-4.760;QD=18.82;ReadPosRankSum=-5.770;VQSLOD=0.6036;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:18.88:0,19,427	0/0:4,0:4:12.03:0,12,242	0/0:17,0:5:5.70:0,6,73	0/1:24,1:5:0.36:0,0,4	0/0:6,0:6:12.04:0,12,293	./.	./.	1/1:5,31:36:90.16:1232,90,0	0/0:6,0:6:15.05:0,15,359	0/0:10,0:10:27.07:0,27,575	0/1:6,0:6:13.32:13,0,158	0/0:10,0:10:12.04:0,12,254	0/0:7,0:7:11.78:0,12,231	0/0:8,0:8:6.02:0,6,125	0/0:7,0:7:15.05:0,15,324	0/0:9,0:9:24.08:0,24,558	0/0:18,0:16:27.09:0,27,555	0/0:13,0:13:22.85:0,23,420	1/1:2,7:9:21.05:280,21,0	1/1:5,5:9:21.01:275,21,0	1/1:4,2:6:3.01:51,3,0	0/0:2,0:2:3.01:0,3,53	0/0:4,0:4:9.03:0,9,195	0/0:4,0:4:9.03:0,9,198	./.	0/0:12,0:12:27.07:0,27,493	1/1:6,5:11:26.91:266,27,0	0/0:9,0:8:15.05:0,15,364
chr10	104904074	.	CAT	C	101.51	PASS	AB=1.000;AC=7;AF=0.250;AN=28;BaseQRankSum=4.042;DP=215;FS=10.401;HRun=0;HaplotypeScore=59.5872;InbreedingCoeff=0.5248;MQ=52.01;MQ0=7;MQRankSum=-1.763;QD=4.06;ReadPosRankSum=0.827;VQSLOD=0.1911;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:0:0,0,0	0/0:4,0:4:2.94:0,3,18	./.	./.	0/0:5,0:5:5.98:0,6,47	./.	./.	0/0:34,0:34:11.55:0,12,66	0/0:5,0:5:1.25:0,1,3	0/0:8,0:8:2.92:0,3,17	1/1:4,0:4:2.98:21,3,0	./.	./.	./.	./.	./.	0/0:19,0:18:15.57:0,16,168	0/0:13,0:13:16.65:0,17,151	1/1:5,1:5:5.82:36,6,0	./.	./.	./.	0/1:3,0:3:0:0,0,0	./.	./.	0/0:6,0:6:4.50:0,4,25	1/1:2,6:11:19.46:145,19,0	0/0:6,0:5:5.75:0,6,57
chr10	104904133	.	GGA	G	705.90	PASS	AB=0.902;AC=14;AF=0.280;AN=50;BaseQRankSum=-2.091;DP=352;FS=0.814;HRun=0;HaplotypeScore=64.6024;InbreedingCoeff=0.3328;MQ=53.69;MQ0=18;MQRankSum=1.192;QD=5.27;ReadPosRankSum=-2.689;VQSLOD=2.1501;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:18.53:0,19,263	0/0:6,0:6:18.05:0,18,263	0/0:44,0:9:10.83:0,11,180	0/0:68,0:19:32.63:0,33,411	0/0:6,0:5:11.83:0,12,143	./.	./.	1/1:24,4:25:32.90:343,33,0	0/0:5,0:5:15.05:0,15,230	0/0:14,0:12:24.06:0,24,318	0/0:13,0:13:9.03:0,9,132	0/0:11,0:11:27.06:0,27,365	0/0:4,0:4:6.02:0,6,93	0/0:4,0:4:6.02:0,6,85	0/0:8,0:8:21.07:0,21,329	0/0:4,0:4:9.03:0,9,144	0/1:24,1:23:24.29:24,0,559	0/1:13,1:14:44.88:45,0,266	1/1:7,0:6:3.01:36,3,0	1/1:4,7:11:14.92:164,15,0	1/1:1,6:6:6.02:72,6,0	0/0:9,0:8:6.02:0,6,95	0/1:5,1:6:26.94:27,0,87	0/0:7,0:7:12.03:0,12,192	./.	0/1:14,0:14:0.53:1,0,309	0/1:12,4:15:2.84:122,0,3	0/1:5,1:5:26.94:27,0,87
chr10	104906469	.	G	GTCAT	8059.59	PASS	AB=0.611;AC=22;AF=0.440;AN=50;BaseQRankSum=-12.576;DP=591;FS=0.490;HRun=0;HaplotypeScore=120.5914;InbreedingCoeff=0.7533;MQ=67.48;MQ0=5;MQRankSum=3.324;QD=28.58;ReadPosRankSum=-2.124;VQSLOD=4.4427;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,25:55:10.62:1221,11,0	0/0:4,0:14:24.03:0,24,224	0/0:21,0:13:3.01:0,3,47	0/0:28,0:23:4.83:0,5,51	1/1:7,7:15:15.05:319,15,0	./.	./.	0/0:35,0:33:2.49:0,2,6	0/1:6,12:19:10.49:739,0,10	0/0:27,0:26:33.11:0,33,510	0/0:16,0:16:27.07:0,27,396	1/1:4,14:18:36.12:844,36,0	1/1:11,9:21:18.06:424,18,0	0/1:9,10:22:19.50:538,0,20	1/1:6,7:13:18.06:424,18,0	0/0:7,0:24:39.04:0,39,363	1/1:16,21:38:48.16:1130,48,0	1/1:11,10:22:18.06:424,18,0	0/0:14,0:19:24.03:0,24,223	0/0:12,0:16:11.99:0,12,106	0/0:17,0:33:36.50:0,36,349	1/1:10,11:24:30.10:706,30,0	1/1:5,5:10:15.01:302,15,0	1/1:10,14:24:42.14:989,42,0	./.	0/0:21,0:34:39.02:0,39,356	0/0:10,0:22:33.04:0,33,307	0/0:5,0:14:20.97:0,21,181
chr10	104914527	.	T	TC	32.09	PASS	AB=0.691;AC=2;AF=0.048;AN=42;BaseQRankSum=3.592;DP=371;FS=0.000;HRun=0;HaplotypeScore=47.5003;InbreedingCoeff=-0.0562;MQ=55.19;MQ0=52;MQRankSum=-0.613;QD=0.76;ReadPosRankSum=-0.511;VQSLOD=1.0210;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:14:42.05:0,42,538	./.	0/0:12,0:6:14.40:0,14,95	0/0:10,0:9:8.48:0,8,154	0/0:24,0:23:60.08:0,60,754	./.	./.	./.	0/0:8,0:7:21.06:0,21,275	0/0:27,0:26:78.17:0,78,997	0/0:32,0:30:84.16:0,84,1088	0/0:11,0:11:33.04:0,33,431	0/0:10,0:9:24.08:0,24,332	0/0:10,0:9:27.09:0,27,372	0/0:18,0:18:51.15:0,51,661	0/0:16,0:12:33.04:0,33,432	0/0:17,0:15:36.01:0,36,453	0/0:14,0:13:39.09:0,39,519	./.	0/1:10,14:6:34.74:83,0,35	./.	0/0:6,0:4:12.01:0,12,146	0/0:21,0:20:54.11:0,54,701	0/0:9,0:7:21.07:0,21,291	./.	0/0:30,0:28:81.22:0,81,1092	0/1:12,6:8:35.15:35,0,107	0/0:13,0:10:24.02:0,24,283
chr10	104919827	.	T	TCA	5639.76	PASS	AB=0.685;AC=8;AF=0.160;AN=50;BaseQRankSum=-11.706;DP=984;FS=4.334;HRun=0;HaplotypeScore=188.7918;InbreedingCoeff=0.6496;MQ=53.05;MQ0=14;MQRankSum=3.674;QD=21.94;ReadPosRankSum=-1.255;VQSLOD=4.7947;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:87.28:0,87,1082	0/0:12,0:12:33.06:0,33,395	0/0:41,0:27:60.13:0,60,693	0/0:50,0:30:62.82:0,63,668	0/0:32,0:32:66.18:0,66,825	./.	./.	0/1:40,26:58:99:1023,0,384	0/0:41,0:41:99:0,102,1257	0/0:43,0:43:99:0,117,1429	0/0:27,0:28:51.23:0,51,806	0/0:35,0:35:72.21:0,72,886	0/0:46,0:46:99:0,114,1397	0/0:34,0:34:69.19:0,69,833	0/0:34,0:34:87.11:0,87,1064	0/0:44,0:44:96.25:0,96,1170	0/0:50,0:51:94.27:0,94,1409	0/0:24,0:24:66.08:0,66,775	0/1:14,15:26:99:652,0,110	1/1:13,32:44:76.14:1238,76,0	1/1:31,45:73:3.98:1514,4,0	0/0:40,0:40:84.27:0,84,1050	0/0:31,0:31:66.19:0,66,811	0/0:57,0:56:99:0,127,1529	./.	0/0:26,0:27:71.54:0,72,829	1/1:4,28:34:75.26:1212,75,0	0/0:12,0:12:36.09:0,36,427
chr10	104921146	.	GC	G	1161.92	PASS	AB=0.614;AC=5;AF=0.109;AN=46;BaseQRankSum=8.115;DP=604;FS=30.453;HRun=1;HaplotypeScore=76.6056;InbreedingCoeff=0.7394;MQ=46.56;MQ0=25;MQRankSum=-3.694;QD=17.60;ReadPosRankSum=-2.669;VQSLOD=1.7913;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:42:99:0,120,1879	0/0:11,0:11:21.07:0,21,335	0/0:31,0:16:42:0,42,640	0/0:45,0:24:65.71:0,66,993	0/0:19,0:18:33.11:0,33,501	./.	./.	0/1:16,27:31:99:914,0,242	0/0:23,0:19:57.19:0,57,903	0/0:21,0:17:51.17:0,51,813	0/0:23,0:23:45.15:0,45,681	0/0:33,0:29:75.26:0,75,1197	0/0:25,0:23:69.24:0,69,1098	0/0:24,0:22:66.23:0,66,1053	0/0:31,0:29:81.28:0,81,1284	0/0:24,0:22:66.22:0,66,1049	0/0:30,0:29:87.30:0,87,1383	0/0:30,0:26:72.25:0,72,1144	1/1:4,6:4:12.04:168,12,0	./.	1/1:8,5:12:15.05:200,15,0	0/0:17,0:16:42.14:0,42,632	0/0:20,0:18:36.12:0,36,529	0/0:41,0:40:99:0,111,1766	./.	0/0:20,0:17:51.17:0,51,812	./.	0/0:6,0:6:12:0,12,155
chr10	104921866	.	C	CT	182.17	PASS	AC=4;AF=0.091;AN=44;BaseQRankSum=4.210;DP=508;FS=3.891;HRun=1;HaplotypeScore=70.0416;InbreedingCoeff=0.8896;MQ=66.87;MQ0=0;MQRankSum=-4.148;QD=18.22;ReadPosRankSum=-1.518;VQSLOD=3.4621;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:64:99:0,187,2559	0/0:13,0:13:39.13:0,39,545	0/0:17,0:17:51.17:0,51,711	0/0:19,0:19:54.15:0,54,735	0/0:26,0:26:75.25:0,75,1041	./.	./.	./.	0/0:19,0:19:54.18:0,54,753	0/0:35,0:35:99:0,99,1362	0/0:17,0:17:51.15:0,51,695	0/0:24,0:24:66.20:0,66,904	0/0:22,0:22:66.22:0,66,915	0/0:23,0:23:69.23:0,69,961	0/0:32,0:32:90.30:0,90,1256	0/0:34,0:34:96.32:0,96,1341	0/0:14,0:14:30.10:0,30,420	0/0:16,0:16:48.16:0,48,671	./.	1/1:0,6:6:15.05:238,15,0	./.	0/0:27,0:27:81.25:0,81,1112	0/0:24,0:24:63.21:0,63,881	0/0:35,0:35:99:0,102,1405	./.	0/0:27,0:27:81.24:0,81,1098	1/1:0,3:2:3.01:46,3,0	0/0:10,0:10:24.08:0,24,333
chr10	104921914	.	CTTCTG	C	71.92	PASS	AC=2;AF=0.045;AN=44;BaseQRankSum=3.444;DP=494;FS=8.773;HRun=0;HaplotypeScore=117.0823;InbreedingCoeff=0.8190;MQ=70.60;MQ0=0;MQRankSum=-3.383;QD=11.99;ReadPosRankSum=0.838;VQSLOD=2.0866;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,4376	0/0:13,0:13:39.12:0,39,1170	0/0:27,0:25:75.26:0,75,2427	0/0:17,0:16:42.62:0,43,1221	0/0:22,0:22:63.22:0,63,1907	./.	./.	0/0:1,0:1:2.90:0,3,16	0/0:20,0:20:60.21:0,60,1990	0/0:28,0:28:81.27:0,81,2569	0/0:20,0:20:57.20:0,57,1895	0/0:20,0:20:60.21:0,60,1980	0/0:23,0:23:69.20:0,69,2155	0/0:25,0:25:75.10:0,75,2055	0/0:27,0:27:78.27:0,78,2585	0/0:33,0:33:99:0,99,3212	0/0:22,0:22:63.22:0,63,2082	0/0:18,0:18:54.17:0,54,1710	./.	1/1:1,5:6:11.91:156,12,0	./.	0/0:25,0:25:72.21:0,72,2175	0/0:19,0:19:54.17:0,54,1641	0/0:43,0:43:99:0,129,3943	./.	0/0:27,0:27:81.28:0,81,2694	./.	0/0:12,0:12:33.11:0,33,1044
chr10	104921999	.	G	GA	192.37	PASS	AC=6;AF=0.130;AN=46;BaseQRankSum=4.858;DP=515;FS=7.966;HRun=1;HaplotypeScore=64.8598;InbreedingCoeff=0.9128;MQ=71.99;MQ0=2;MQRankSum=-5.040;QD=16.03;ReadPosRankSum=-1.516;VQSLOD=2.6379;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1713	0/0:11,0:11:33.11:0,33,428	0/0:33,0:32:93.27:0,93,1159	0/0:35,0:35:93.72:0,94,1082	0/0:21,0:21:57.19:0,57,738	./.	./.	1/1:0,6:3:9.03:135,9,0	0/0:15,0:15:45.12:0,45,553	0/0:26,0:26:78.23:0,78,969	0/0:16,0:16:42.14:0,42,545	0/0:30,0:30:87.28:0,87,1127	0/0:24,0:24:72.17:0,72,886	0/0:26,0:26:78.18:0,78,964	0/0:30,0:30:84.25:0,84,1057	0/0:33,0:33:99:0,99,1268	0/0:23,0:23:69.18:0,69,876	0/0:18,0:18:51.17:0,51,661	1/1:1,2:3:5.95:42,6,0	./.	./.	0/0:26,0:26:69.14:0,69,820	0/0:20,0:20:45.15:0,45,582	0/0:36,0:36:99:0,102,1321	./.	0/0:23,0:23:69.19:0,69,844	1/1:0,3:3:9.03:134,9,0	0/0:10,0:9:27.09:0,27,349
chr10	104922084	.	CAG	C	133.44	PASS	AC=2;AF=0.048;AN=42;BaseQRankSum=3.960;DP=535;FS=3.478;HRun=0;HaplotypeScore=89.2334;InbreedingCoeff=0.9753;MQ=81.19;MQ0=0;MQRankSum=-2.751;QD=19.06;ReadPosRankSum=-1.437;VQSLOD=3.1730;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,169,3063	0/0:11,0:11:30.10:0,30,560	0/0:32,0:31:76.42:0,76,1333	0/0:21,0:21:50.92:0,51,740	0/0:31,0:31:93.27:0,93,1634	./.	./.	1/1:0,7:5:15.05:220,15,0	0/0:20,0:20:60.21:0,60,1115	0/0:28,0:28:81.25:0,81,1403	0/0:19,0:19:51.16:0,51,902	0/0:21,0:21:54.17:0,54,971	0/0:24,0:24:66.21:0,66,1204	0/0:27,0:27:78.27:0,78,1453	0/0:32,0:32:96.30:0,96,1734	0/0:28,0:28:84.27:0,84,1520	0/0:30,0:30:90.31:0,90,1665	0/0:22,0:22:66.23:0,66,1213	./.	./.	./.	0/0:19,0:19:54.19:0,54,1010	0/0:28,0:28:81.28:0,81,1509	0/0:42,0:42:99:0,117,2191	./.	0/0:26,0:25:78.27:0,78,1458	./.	0/0:6,0:6:18.06:0,18,337
chr10	104922910	.	T	TA	2769.27	PASS	AB=1.000;AC=11;AF=0.220;AN=50;BaseQRankSum=-9.408;DP=542;FS=5.454;HRun=7;HaplotypeScore=61.3473;InbreedingCoeff=0.9260;MQ=75.59;MQ0=1;MQRankSum=3.117;QD=20.82;ReadPosRankSum=-3.096;VQSLOD=2.3515;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:43.47:0,43,559	0/0:12,0:12:33.05:0,33,319	0/0:36,0:28:34.55:0,35,377	0/1:22,0:20:2.01:2,0,244	0/0:34,0:34:99:0,99,947	./.	./.	1/1:5,19:23:57.15:662,57,0	0/0:18,0:18:45.06:0,45,434	0/0:21,0:21:60.10:0,60,579	0/0:27,0:27:78.09:0,78,746	0/0:15,0:15:42.05:0,42,400	0/0:20,0:20:48.05:0,48,456	0/0:13,0:13:36.06:0,36,347	0/0:19,0:18:48.07:0,48,463	0/0:12,0:12:27.02:0,27,256	0/0:22,0:22:63.08:0,63,601	0/0:32,0:32:84.13:0,84,811	1/1:6,24:30:75.19:865,75,0	1/1:2,20:22:54.08:614,54,0	1/1:2,12:14:27.08:325,27,0	0/0:18,0:18:42.05:0,42,401	0/0:20,0:20:57.07:0,57,544	0/0:19,0:19:44.57:0,45,434	./.	0/0:30,0:30:87.12:0,87,829	1/1:2,19:21:39.12:470,39,0	0/0:17,0:17:42.06:0,42,406
chr10	104925160	.	AC	A	3982.67	PASS	AC=10;AF=0.200;AN=50;BaseQRankSum=11.172;DP=578;FS=0.000;HRun=6;HaplotypeScore=67.4765;InbreedingCoeff=0.9902;MQ=81.80;MQ0=0;MQRankSum=-0.755;QD=29.07;ReadPosRankSum=-0.753;VQSLOD=3.8621;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,1415	0/0:10,0:10:27.07:0,27,339	0/0:24,0:24:72.20:0,72,902	0/0:27,0:28:10.90:0,11,669	0/0:19,0:19:51.11:0,51,635	./.	./.	1/1:5,26:31:81.17:856,81,0	0/0:17,0:17:48.14:0,48,616	0/0:30,0:30:87.26:0,87,1106	0/0:21,0:20:57.18:0,57,747	0/0:23,0:23:66.19:0,66,837	0/0:23,0:23:66.19:0,66,828	0/0:20,0:20:60.20:0,60,789	0/0:17,0:17:51.17:0,51,671	0/0:17,0:17:51.15:0,51,654	0/0:35,0:35:99:0,99,1252	0/0:21,0:21:57.15:0,57,731	1/1:3,18:21:57.14:613,57,0	1/1:0,28:26:75.19:806,75,0	1/1:2,33:35:99:1064,99,0	0/0:28,0:28:75.23:0,75,960	0/0:22,0:22:57.19:0,57,749	0/0:17,0:17:44.92:0,45,552	./.	0/0:19,0:19:57.17:0,57,729	1/1:1,21:22:60.15:645,60,0	0/0:9,0:9:27.09:0,27,355
chr10	104925719	.	AAGAAAG	A	4736.95	PASS	AC=10;AF=0.200;AN=50;BaseQRankSum=12.934;DP=604;FS=3.919;HRun=0;HaplotypeScore=131.2462;InbreedingCoeff=0.9693;MQ=55.25;MQ0=12;MQRankSum=-7.778;QD=37.01;ReadPosRankSum=-2.321;VQSLOD=4.3659;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,3254	0/0:11,0:11:33.11:0,33,1017	0/0:31,0:8:15.05:0,15,326	0/0:37,0:16:19.68:0,20,496	0/0:32,0:32:90.31:0,90,2797	./.	./.	1/1:5,27:26:60.17:823,60,0	0/0:24,0:24:69.20:0,69,2049	0/0:35,0:34:96.33:0,96,2956	0/0:19,0:19:48.16:0,48,1592	0/0:19,0:19:57.18:0,57,1772	0/0:14,0:14:39.13:0,39,1300	0/0:15,0:15:39.13:0,39,1281	0/0:15,0:15:42.14:0,42,1277	0/0:18,0:18:54.16:0,54,1614	0/0:35,0:34:72.39:0,72,2686	0/0:30,0:30:40.91:0,41,2190	1/1:1,19:20:57.16:1107,57,0	1/1:5,34:37:84.20:1698,84,0	1/1:2,6:7:6.01:92,6,0	0/0:30,0:30:90.31:0,90,2640	0/0:21,0:21:57.20:0,57,1784	0/0:17,0:17:43.47:0,43,1451	./.	0/0:20,0:20:60.21:0,60,1905	1/1:3,26:26:45.02:1017,45,0	0/0:17,0:16:48.16:0,48,1309
chr10	104926345	.	G	GTA	2721.87	PASS	AB=0.579;AC=11;AF=0.229;AN=48;BaseQRankSum=2.104;DP=240;FS=39.288;HRun=0;HaplotypeScore=59.5475;InbreedingCoeff=0.6710;MQ=81.20;MQ0=0;MQRankSum=-4.910;QD=26.17;ReadPosRankSum=-4.527;VQSLOD=1.2554;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:30.03:0,30,390	0/0:4,0:4:12.01:0,12,136	1/1:9,0:4:0.54:1,1,0	0/0:23,0:16:8.03:0,8,52	0/0:4,0:4:6.02:0,6,78	./.	./.	1/1:9,36:45:99:1814,115,0	0/0:3,0:3:9.02:0,9,103	0/0:10,0:10:24.08:0,24,312	0/0:5,0:5:9.03:0,9,114	0/0:8,0:8:21.07:0,21,273	0/0:5,0:5:15.03:0,15,171	0/0:2,0:2:3.01:0,3,39	0/0:4,0:4:9.03:0,9,117	0/0:4,0:4:12.04:0,12,156	0/0:15,0:15:29.46:0,29,359	0/0:12,0:12:27.05:0,27,331	1/1:4,7:11:21.07:357,21,0	1/1:1,13:12:12.04:201,12,0	0/1:3,8:11:21.92:93,0,22	0/0:5,0:5:12.04:0,12,156	0/0:5,0:5:9.03:0,9,117	0/0:3,0:3:8.99:0,9,98	./.	0/0:6,0:6:15.05:0,15,195	1/1:2,12:13:24.08:408,24,0	./.
chr10	104926396	.	T	TCC	341.34	PASS	AB=0.500;AC=13;AF=0.591;AN=22;BaseQRankSum=5.078;DP=74;FS=0.000;HRun=0;HaplotypeScore=72.6192;InbreedingCoeff=0.5416;MQ=33.78;MQ0=5;MQRankSum=-4.855;QD=7.94;ReadPosRankSum=-0.239;VQSLOD=2.9275;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:0.89:2,1,0	1/1:2,0:2:2.94:18,3,0	./.	./.	./.	./.	./.	1/1:6,0:6:2.07:23,2,0	./.	0/0:1,0:1:3.01:0,3,38	./.	./.	0/0:1,0:1:3.01:0,3,46	./.	./.	./.	0/0:15,0:12:21.07:0,21,302	0/0:9,0:9:14.74:0,15,213	1/1:4,1:5:11.20:91,11,0	1/1:3,7:10:1.22:3,1,0	0/1:0,1:1:0:0,0,0	./.	./.	./.	./.	./.	1/1:10,7:16:17.40:301,17,0	./.
chr10	104926416	.	T	TCC	1462.29	PASS	AC=10;AF=0.357;AN=28;BaseQRankSum=3.231;DP=99;FS=0.000;HRun=0;HaplotypeScore=66.4053;InbreedingCoeff=0.6128;MQ=36.86;MQ0=4;MQRankSum=-4.246;QD=22.85;ReadPosRankSum=1.653;VQSLOD=4.0065;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:2,0:2:3.01:0,3,47	0/0:2,0:1:2.04:0,2,6	./.	./.	./.	./.	1/1:17,0:16:10.42:559,10,0	0/0:1,0:1:3.01:0,3,44	0/0:1,0:1:2.90:0,3,16	./.	0/0:1,0:1:3:0,3,25	./.	0/0:1,0:1:2.99:0,3,24	./.	./.	0/0:14,0:11:21.07:0,21,301	0/0:10,0:10:24.08:0,24,331	1/1:5,1:6:18.04:237,18,0	1/1:10,7:17:14.92:148,15,0	1/1:3,1:4:5.99:61,6,0	./.	./.	./.	./.	0/0:1,0:1:3.01:0,3,47	1/1:13,7:19:42.14:578,42,0	./.
chr10	104926901	.	A	AT	1332.21	PASS	AB=0.727;AC=4;AF=0.080;AN=50;BaseQRankSum=-6.509;DP=847;FS=1.135;HRun=6;HaplotypeScore=98.7391;InbreedingCoeff=-0.0958;MQ=53.48;MQ0=21;MQRankSum=-2.227;QD=6.97;ReadPosRankSum=1.414;VQSLOD=0.0868;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:75.16:0,75,763	0/0:10,0:10:27.05:0,27,270	0/0:31,0:11:20.99:0,21,192	0/0:30,0:12:17.13:0,17,182	0/0:26,0:26:69.15:0,69,704	./.	./.	0/0:78,11:68:2.84:0,3,1505	0/0:20,0:20:51.08:0,51,511	0/0:29,0:29:84.15:0,84,845	0/0:21,0:21:60.13:0,60,612	0/0:30,0:30:81.17:0,81,819	0/0:31,0:31:78.16:0,78,789	0/0:26,0:26:57.02:0,57,569	0/0:34,0:34:75.17:0,75,765	0/0:33,0:32:72.16:0,72,734	0/0:31,0:31:60.50:0,60,740	0/0:30,0:30:72.11:0,72,735	0/1:42,11:36:99:187,0,475	0/1:19,22:32:56.22:560,0,56	0/1:42,19:58:99:332,0,733	0/0:25,0:25:66.14:0,66,667	0/0:32,0:32:81.18:0,81,826	0/0:42,0:42:90.18:0,90,910	./.	0/0:32,0:32:87.18:0,87,882	0/1:18,18:26:99:360,0,157	0/0:17,0:17:51.12:0,51,520
chr10	104928786	.	G	GAC	2891.56	PASS	AB=0.805;AC=23;AF=0.523;AN=44;BaseQRankSum=-4.834;DP=562;FS=0.000;HRun=0;HaplotypeScore=119.7000;InbreedingCoeff=-0.2600;MQ=62.45;MQ0=14;MQRankSum=2.787;QD=7.16;ReadPosRankSum=-0.376;VQSLOD=2.8049;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:35,5:39:45.32:461,45,0	0/0:4,0:10:6.57:0,7,30	1/1:34,0:19:0.47:1,0,0	./.	1/1:13,6:19:15:218,15,0	./.	./.	./.	0/1:21,10:32:89.35:252,0,89	0/1:12,4:16:14.72:160,0,15	0/1:8,7:15:68.29:68,0,133	0/1:22,6:27:67.46:67,0,91	0/1:12,6:19:58.12:157,0,58	1/1:9,11:20:8.53:256,9,0	0/1:15,12:28:52.43:242,0,52	0/1:12,7:20:55.53:200,0,56	0/1:20,7:27:99:107,0,169	0/1:9,1:13:44.29:116,0,44	0/0:10,0:19:5.06:0,5,21	0/0:4,0:17:10.89:0,11,50	./.	0/1:16,3:20:15.23:71,0,15	0/1:11,5:16:17.54:104,0,18	1/1:12,5:31:29.43:369,29,0	./.	0/1:16,2:18:35.68:170,0,36	0/0:8,0:27:10.13:0,10,63	0/1:4,0:5:8.08:17,0,8
chr10	104929302	.	AGTCT	A	674.78	PASS	AB=0.858;AC=4;AF=0.080;AN=50;BaseQRankSum=6.497;DP=537;FS=3.767;HRun=0;HaplotypeScore=103.5979;InbreedingCoeff=-0.0851;MQ=64.48;MQ0=5;MQRankSum=-7.242;QD=9.50;ReadPosRankSum=-3.651;VQSLOD=1.6605;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,2976	0/0:11,0:11:30.10:0,30,789	0/0:50,0:25:58.68:0,59,1549	0/0:41,0:22:61.28:0,61,1297	0/0:24,0:24:72.25:0,72,2009	./.	./.	0/1:21,4:21:99:271,0,803	0/0:23,0:23:69.24:0,69,1914	0/0:24,0:24:72.25:0,72,2002	0/0:17,0:17:51.18:0,51,1422	0/0:22,0:22:66.23:0,66,1848	0/0:11,0:11:33.11:0,33,905	0/0:10,0:10:30.10:0,30,843	0/0:16,0:16:45.15:0,45,1263	0/0:13,0:13:39.13:0,39,1117	0/0:31,1:32:90.29:0,90,2509	0/0:15,0:15:42.14:0,42,1135	0/1:10,5:13:99:361,0,137	0/1:10,0:11:8.98:9,0,139	0/0:12,6:19:15.01:0,15,293	0/0:17,0:17:48.16:0,48,1377	0/0:17,0:17:45.15:0,45,1203	0/0:35,0:35:99:0,102,2868	./.	0/0:18,0:18:54.19:0,54,1557	0/1:17,1:18:99:139,0,585	0/0:11,0:11:33.11:0,33,911
chr10	104930087	.	T	TG	1191.99	PASS	AC=10;AF=0.200;AN=50;BaseQRankSum=11.085;DP=615;FS=0.000;HRun=3;HaplotypeScore=68.4875;InbreedingCoeff=0.9937;MQ=58.10;MQ0=9;MQRankSum=-6.672;QD=12.42;ReadPosRankSum=-1.633;VQSLOD=1.4544;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,1186	0/0:11,0:11:27.08:0,27,324	0/0:27,0:14:38.31:0,38,416	0/0:31,0:13:39.06:0,39,444	0/0:24,0:24:60.16:0,60,706	./.	./.	1/1:23,0:22:62.80:492,63,0	0/0:26,0:26:75.21:0,75,881	0/0:33,0:32:93.28:0,93,1108	0/0:17,0:16:39.05:0,39,453	0/0:19,0:19:54.16:0,54,647	0/0:16,0:16:42.13:0,42,504	0/0:24,0:24:72.18:0,72,829	0/0:33,0:33:96.29:0,96,1151	0/0:21,0:21:57.17:0,57,684	0/0:43,0:43:99:0,126,1511	0/0:16,0:16:42.13:0,42,504	1/1:12,1:10:23.90:198,24,0	1/1:14,1:13:20.63:129,21,0	1/1:27,3:28:24.61:420,25,0	0/0:32,0:32:90.26:0,90,1065	0/0:29,0:29:78.22:0,78,924	0/0:39,0:39:99:0,111,1330	./.	0/0:34,0:33:93.28:0,93,1107	1/1:15,0:12:17.78:121,18,0	0/0:6,0:6:18.06:0,18,216
chr10	104930090	.	G	GA	2541.34	PASS	AC=10;AF=0.200;AN=50;BaseQRankSum=-7.784;DP=615;FS=0.516;HRun=1;HaplotypeScore=62.2460;InbreedingCoeff=0.9954;MQ=58.36;MQ0=5;MQRankSum=-6.391;QD=26.75;ReadPosRankSum=-1.178;VQSLOD=3.1248;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1278	0/0:11,0:11:30.06:0,30,371	0/0:27,0:14:41.29:0,41,452	0/0:32,0:13:39.08:0,39,476	0/0:24,0:24:60.15:0,60,733	./.	./.	1/1:0,22:22:66.22:968,66,0	0/0:26,0:26:78.11:0,78,943	0/0:33,0:32:96.27:0,96,1227	0/0:16,0:16:36.12:0,36,467	0/0:19,0:19:57.17:0,57,714	0/0:15,0:15:42.13:0,42,545	0/0:24,0:24:66.20:0,66,843	0/0:34,0:34:99:0,99,1240	0/0:22,0:22:66.18:0,66,816	0/0:43,0:43:99:0,129,1641	0/0:17,0:17:45.12:0,45,568	1/1:5,8:9:24.05:336,24,0	1/1:2,14:14:21.07:315,21,0	1/1:6,24:29:60.51:822,61,0	0/0:30,0:30:87.27:0,87,1115	0/0:29,0:28:75.24:0,75,973	0/0:39,0:39:99:0,114,1417	./.	0/0:34,0:33:90.29:0,90,1168	1/1:1,13:13:18.06:269,18,0	0/0:7,0:7:21.04:0,21,255
chr10	104930481	.	T	TA	1845.22	PASS	AC=10;AF=0.200;AN=50;BaseQRankSum=10.660;DP=492;FS=1.178;HRun=3;HaplotypeScore=67.0784;InbreedingCoeff=0.9911;MQ=65.94;MQ0=4;MQRankSum=-8.825;QD=23.66;ReadPosRankSum=-2.548;VQSLOD=2.4083;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.28:0,90,1080	0/0:11,0:11:33.10:0,33,396	0/0:25,0:15:35.39:0,35,388	0/0:20,0:14:39.09:0,39,453	0/0:37,0:37:99:0,108,1296	./.	./.	1/1:2,17:9:27.08:360,27,0	0/0:16,0:16:42.13:0,42,504	0/0:30,0:30:90.26:0,90,1061	0/0:15,0:14:39.12:0,39,468	0/0:15,0:15:42.10:0,42,480	0/0:18,0:17:37.36:0,37,464	0/0:16,0:16:42.13:0,42,504	0/0:25,0:25:69.21:0,69,828	0/0:22,0:22:63.19:0,63,756	0/0:31,0:31:90.28:0,90,1079	0/0:20,0:20:57.17:0,57,681	1/1:0,13:7:21.07:294,21,0	1/1:2,15:13:36.08:481,36,0	1/1:0,13:13:30.10:419,30,0	0/0:18,0:18:54.15:0,54,636	0/0:21,0:21:54.16:0,54,648	0/0:16,0:16:42.13:0,42,504	./.	0/0:21,0:21:60.16:0,60,700	1/1:1,15:11:33.11:461,33,0	0/0:4,0:4:12.04:0,12,144
chr10	104930862	.	TG	T	5447.05	PASS	AB=0.592;AC=7;AF=0.140;AN=50;BaseQRankSum=11.832;DP=800;FS=3.371;HRun=2;HaplotypeScore=96.9317;InbreedingCoeff=0.5011;MQ=68.71;MQ0=0;MQRankSum=-1.651;QD=28.97;ReadPosRankSum=0.102;VQSLOD=4.4422;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1754	0/0:9,0:9:24.08:0,24,359	0/0:27,0:26:72.21:0,72,1005	0/0:34,0:34:84.27:0,84,1224	0/0:28,0:28:84.22:0,84,1190	./.	./.	0/1:9,30:38:99:1041,0,208	0/0:42,0:42:99:0,126,1869	0/0:37,0:37:99:0,108,1550	0/0:23,0:23:66.17:0,66,909	0/0:32,0:32:93.31:0,93,1376	0/0:29,0:29:84.28:0,84,1255	0/0:33,0:33:96.30:0,96,1401	0/0:50,0:50:99:0,150,2230	0/0:29,0:29:87.28:0,87,1284	0/0:44,0:44:99:0,126,1862	0/0:28,0:28:75.25:0,75,1124	0/1:9,12:21:99:441,0,124	1/1:4,27:30:32.18:870,32,0	1/1:0,59:59:99:2142,166,0	0/0:31,0:31:90.30:0,90,1349	0/0:14,0:14:42.14:0,42,628	0/0:38,0:38:99:0,114,1708	./.	0/0:30,0:30:87.29:0,87,1287	0/1:10,28:38:99:952,0,121	0/0:14,0:14:42.08:0,42,544
chr10	104931113	.	T	TC	2035.61	PASS	AB=0.756;AC=5;AF=0.100;AN=50;BaseQRankSum=8.749;DP=683;FS=9.322;HRun=4;HaplotypeScore=87.9054;InbreedingCoeff=-0.1119;MQ=61.53;MQ0=2;MQRankSum=-9.506;QD=9.42;ReadPosRankSum=1.354;VQSLOD=0.4039;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.22:0,78,884	0/0:15,0:15:45.13:0,45,511	0/0:30,0:28:73.94:0,74,804	0/0:14,0:14:15.19:0,15,290	0/0:35,0:35:93.27:0,93,1054	./.	./.	0/1:43,8:44:99:235,0,680	0/0:17,0:17:48.14:0,48,545	0/0:40,0:40:99:0,120,1362	0/0:27,0:27:72.20:0,72,815	0/0:24,0:24:63.16:0,63,705	0/0:12,0:12:30.09:0,30,340	0/0:33,0:33:93.27:0,93,1054	0/0:18,0:18:51.15:0,51,578	0/0:22,0:22:60.17:0,60,680	0/0:21,0:21:63.14:0,63,692	0/0:29,0:29:81.21:0,81,906	0/1:28,12:38:99:320,0,590	0/1:27,22:49:99:649,0,656	0/1:13,6:17:99:196,0,292	0/0:21,0:21:60.17:0,60,680	0/0:30,0:30:87.25:0,87,987	0/0:15,0:15:45.13:0,45,511	./.	0/0:26,0:26:75.21:0,75,843	0/1:32,25:56:99:751,0,802	0/0:10,0:10:30.09:0,30,340
chr10	104931417	.	TAC	T	549.11	PASS	AB=0.824;AC=5;AF=0.100;AN=50;BaseQRankSum=7.815;DP=548;FS=6.893;HRun=0;HaplotypeScore=87.9600;InbreedingCoeff=-0.1130;MQ=59.27;MQ0=6;MQRankSum=-4.451;QD=3.07;ReadPosRankSum=0.799;VQSLOD=1.4818;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.25:0,81,1519	0/0:3,0:3:9.03:0,9,174	0/0:18,0:12:33.11:0,33,591	0/0:18,0:16:39.12:0,39,639	0/0:27,0:27:60.20:0,60,1120	./.	./.	0/1:29,6:30:7.55:8,0,1375	0/0:14,0:14:42.14:0,42,811	0/0:27,0:27:81.28:0,81,1566	0/0:14,0:14:27.08:0,27,522	0/0:17,0:17:51.16:0,51,952	0/0:22,0:22:63.20:0,63,1165	0/0:18,0:18:54.17:0,54,992	0/0:19,0:19:57.18:0,57,1067	0/0:21,0:21:63.22:0,63,1208	0/0:23,0:22:66.23:0,66,1275	0/0:19,0:19:57.20:0,57,1083	0/1:23,3:24:68.66:69,0,1052	0/1:34,14:46:99:197,0,1660	0/1:19,16:34:99:341,0,786	0/0:14,0:14:36.12:0,36,695	0/0:15,0:15:42.14:0,42,801	0/0:22,0:22:66.23:0,66,1275	./.	0/0:27,0:27:81.28:0,81,1565	0/1:31,3:31:47.34:47,0,1472	0/0:3,0:3:9.03:0,9,173
chr10	104931650	.	A	AG	74.60	PASS	AC=2;AF=0.050;AN=40;BaseQRankSum=3.263;DP=179;FS=22.057;HRun=0;HaplotypeScore=23.4874;InbreedingCoeff=0.3261;MQ=58.07;MQ0=14;MQRankSum=-3.493;QD=7.46;ReadPosRankSum=1.100;VQSLOD=1.5380;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:27.09:0,27,376	0/0:1,0:1:3.01:0,3,42	0/0:27,0:4:6.02:0,6,82	0/0:55,0:8:6.40:0,6,67	0/0:1,0:1:0.47:0,0,1	./.	./.	1/1:6,4:5:15.04:159,15,0	0/0:1,0:1:3.01:0,3,42	0/0:3,0:2:6.02:0,6,83	0/0:4,0:4:9.03:0,9,126	0/0:2,0:2:6.02:0,6,83	0/0:3,0:3:9.03:0,9,126	0/0:3,0:3:6.02:0,6,84	./.	0/0:4,0:4:12.04:0,12,158	0/0:23,0:23:59.81:0,60,736	0/0:17,0:17:44.96:0,45,538	./.	./.	./.	0/0:1,0:1:3.01:0,3,42	./.	0/0:2,0:2:2.99:0,3,24	./.	0/0:1,0:1:3.01:0,3,42	0/0:1,0:1:2.37:0,2,8	0/0:7,0:7:20.88:0,21,223
chr10	104932119	.	GT	G	3904.56	PASS	AB=0.633;AC=6;AF=0.120;AN=50;BaseQRankSum=9.007;DP=689;FS=1.215;HRun=2;HaplotypeScore=94.9513;InbreedingCoeff=0.2372;MQ=57.80;MQ0=9;MQRankSum=-2.028;QD=18.42;ReadPosRankSum=-1.506;VQSLOD=3.2760;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1539	0/0:15,0:15:45.15:0,45,657	0/0:26,0:24:69.16:0,69,894	0/0:30,0:23:41.44:0,41,787	0/0:19,0:19:54.13:0,54,738	./.	./.	0/1:18,26:42:99:798,0,341	0/0:31,0:31:90.26:0,90,1272	0/0:28,0:27:66.22:0,66,959	0/0:16,0:16:48.14:0,48,673	0/0:26,0:26:72.11:0,72,1011	0/0:21,0:21:63.18:0,63,868	0/0:26,0:26:75.25:0,75,1105	0/0:19,0:19:57.18:0,57,825	0/0:21,0:21:63.21:0,63,928	0/0:42,0:42:99:0,126,1733	0/0:29,0:29:84.28:0,84,1242	1/1:17,18:24:18.83:631,19,0	0/1:19,18:33:99:605,0,154	0/1:17,41:57:99:1188,0,160	0/0:19,0:19:45.11:0,45,634	0/0:13,0:13:30.09:0,30,425	0/0:33,0:33:96.29:0,96,1379	./.	0/0:16,0:16:48.15:0,48,676	0/1:17,21:32:99:682,0,262	0/0:6,0:6:18.06:0,18,266
chr10	104932187	.	GA	G	1397.81	PASS	AB=0.693;AC=5;AF=0.100;AN=50;BaseQRankSum=8.870;DP=745;FS=11.191;HRun=5;HaplotypeScore=116.5291;InbreedingCoeff=-0.1215;MQ=64.79;MQ0=4;MQRankSum=-5.158;QD=7.36;ReadPosRankSum=-2.717;VQSLOD=-0.3273;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,164,2218	0/0:9,0:9:24.08:0,24,328	0/0:32,0:15:19.79:0,20,404	0/0:34,1:26:1.80:0,2,503	0/0:29,0:29:72.24:0,72,982	./.	./.	0/1:31,35:62:99:827,0,927	0/0:25,0:25:75.25:0,75,1026	0/0:28,0:28:84.26:0,84,1102	0/0:31,0:31:90.30:0,90,1223	0/0:31,0:31:93.30:0,93,1251	0/0:21,0:21:63.20:0,63,844	0/0:24,0:24:72.22:0,72,963	0/0:22,0:22:63.18:0,63,829	0/0:21,0:21:63.17:0,63,815	0/0:48,0:48:99:0,138,1862	0/0:24,0:24:66.20:0,66,882	0/1:15,13:26:99:311,0,346	0/1:15,20:26:90.72:91,0,384	0/1:24,6:30:32.22:32,0,353	0/0:24,0:24:63.21:0,63,856	0/0:15,0:15:39.07:0,39,481	0/0:36,0:36:99:0,102,1395	./.	0/0:35,0:35:99:0,99,1337	0/1:15,16:27:99:252,0,284	0/0:8,0:8:24.08:0,24,328
chr10	104932246	.	GGCAA	G	1663.55	PASS	AB=0.852;AC=9;AF=0.180;AN=50;BaseQRankSum=4.669;DP=585;FS=4.521;HRun=0;HaplotypeScore=129.5445;InbreedingCoeff=0.9068;MQ=68.63;MQ0=2;MQRankSum=-5.861;QD=14.34;ReadPosRankSum=-1.233;VQSLOD=2.8746;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,2720	0/0:13,0:13:39.02:0,39,574	0/0:31,0:27:64.54:0,65,1380	0/0:28,0:26:65.16:0,65,1138	0/0:12,0:12:33.08:0,33,690	./.	./.	1/1:15,6:20:30.08:488,30,0	0/0:16,0:16:48.16:0,48,1200	0/0:19,0:19:51.17:0,51,1326	0/0:13,0:13:33.09:0,33,740	0/0:33,0:33:96.30:0,96,2410	0/0:31,0:31:90.26:0,90,2126	0/0:25,0:25:72.13:0,72,1662	0/0:22,0:22:66.20:0,66,1661	0/0:27,0:27:81.26:0,81,2038	0/0:41,0:41:99:0,114,2890	0/0:21,0:21:60.15:0,60,1434	0/1:19,4:20:2.47:378,0,2	1/1:20,1:12:14.01:183,14,0	1/1:24,9:33:20.87:338,21,0	0/0:11,0:11:30.08:0,30,678	0/0:17,0:17:36.10:0,36,827	0/0:36,0:36:99:0,105,2688	./.	0/0:24,0:24:66.17:0,66,1354	1/1:16,2:16:19.76:435,20,0	0/0:7,0:7:21.05:0,21,514
chr10	104932249	.	AAGCG	A	1176.32	PASS	AC=10;AF=0.200;AN=50;BaseQRankSum=10.148;DP=561;FS=1.996;HRun=0;HaplotypeScore=124.1511;InbreedingCoeff=0.9765;MQ=70.73;MQ0=1;MQRankSum=-6.495;QD=12.25;ReadPosRankSum=-0.274;VQSLOD=3.1270;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,2857	0/0:14,0:14:39.13:0,39,836	0/0:31,0:28:73.27:0,73,1746	0/0:29,0:27:67.04:0,67,1515	0/0:13,0:13:39.06:0,39,762	./.	./.	1/1:18,0:17:25.04:268,25,0	0/0:16,0:16:48.14:0,48,1176	0/0:20,0:20:54.19:0,54,1472	0/0:13,0:13:33.06:0,33,758	0/0:34,0:34:99:0,102,2612	0/0:31,0:31:90.31:0,90,2317	0/0:25,0:25:75.25:0,75,1898	0/0:22,0:22:66.22:0,66,1741	0/0:27,0:27:81.26:0,81,2117	0/0:40,0:40:99:0,117,3069	0/0:20,0:20:60.17:0,60,1523	1/1:13,4:15:32.03:325,32,0	1/1:9,9:10:8.07:100,8,0	1/1:20,6:26:14.17:202,14,0	0/0:11,0:11:30.10:0,30,738	0/0:15,0:15:36.12:0,36,955	0/0:35,0:35:99:0,105,2870	./.	0/0:22,0:22:66.21:0,66,1546	1/1:8,9:15:34.63:447,35,0	0/0:7,0:7:21.07:0,21,570
chr10	104932258	.	GGCT	G	59.04	PASS	AB=0.711;AC=3;AF=0.060;AN=50;BaseQRankSum=5.833;DP=533;FS=33.388;HRun=0;HaplotypeScore=110.1174;InbreedingCoeff=-0.0544;MQ=73.43;MQ0=0;MQRankSum=-4.751;QD=1.11;ReadPosRankSum=0.923;VQSLOD=0.2749;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,2329	0/0:13,0:13:39.13:0,39,907	0/0:27,0:26:70.54:0,71,1637	0/0:23,0:23:69.10:0,69,1532	0/0:10,0:10:24.08:0,24,549	./.	./.	0/0:27,0:25:69.24:0,69,1616	0/0:15,0:15:42.14:0,42,979	0/0:16,0:16:45.15:0,45,1012	0/0:13,0:13:39.13:0,39,921	0/0:34,0:34:99:0,99,2339	0/0:30,0:30:90.31:0,90,2112	0/0:24,0:24:72.25:0,72,1686	0/0:19,0:19:54.18:0,54,1265	0/0:26,0:26:78.25:0,78,1752	0/0:37,0:37:99:0,105,2418	0/0:19,0:19:57.20:0,57,1333	0/1:15,4:16:47.72:48,0,717	0/1:9,9:11:1.07:1,0,404	0/0:22,6:28:23.75:0,24,564	0/0:8,0:8:24.08:0,24,553	0/0:15,0:15:36.12:0,36,826	0/0:34,0:34:99:0,99,2299	./.	0/0:20,0:20:60.21:0,60,1369	0/1:7,9:14:98.75:99,0,456	0/0:7,0:7:21.07:0,21,485
chr10	104932398	.	T	TC	623.64	PASS	AB=0.780;AC=3;AF=0.060;AN=50;BaseQRankSum=8.031;DP=693;FS=4.975;HRun=0;HaplotypeScore=102.8747;InbreedingCoeff=-0.0641;MQ=59.83;MQ0=6;MQRankSum=-6.994;QD=4.62;ReadPosRankSum=-1.644;VQSLOD=2.9891;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:96.32:0,96,1340	0/0:15,0:15:45.15:0,45,629	0/0:20,0:19:44.19:0,44,666	0/0:10,0:9:25.61:0,26,293	0/0:31,0:31:93.29:0,93,1280	./.	./.	0/1:36,10:42:99:168,0,1227	0/0:25,0:25:75.24:0,75,1031	0/0:34,0:34:99:0,102,1400	0/0:26,0:26:69.16:0,69,878	0/0:32,0:32:96.30:0,96,1324	0/0:22,0:22:66.21:0,66,905	0/0:25,0:25:75.24:0,75,1029	0/0:24,0:24:72.22:0,72,972	0/0:26,0:26:78.26:0,78,1089	0/0:24,0:24:72.16:0,72,946	0/0:22,0:22:66.19:0,66,901	0/0:26,5:28:21.30:0,21,857	0/1:35,19:44:99:350,0,1175	0/0:34,2:36:51.43:0,51,1291	0/0:37,0:37:99:0,111,1499	0/0:25,0:25:75.18:0,75,991	0/0:18,0:18:51.17:0,51,711	./.	0/0:25,0:25:72.22:0,72,976	0/1:25,9:32:99:204,0,910	0/0:16,0:16:48.16:0,48,669
chr10	104933983	.	T	TTTCATTCA	4262.79	PASS	AB=0.692;AC=11;AF=0.220;AN=50;BaseQRankSum=8.100;DP=725;FS=7.781;HRun=0;HaplotypeScore=215.1137;InbreedingCoeff=0.8326;MQ=62.97;MQ0=7;MQRankSum=-9.439;QD=17.84;ReadPosRankSum=-4.374;VQSLOD=2.5260;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:75.22:0,75,1690	1/1:5,0:17:24.97:785,25,0	0/0:26,0:17:6.02:0,6,148	0/0:28,0:25:6.02:0,6,146	0/0:26,0:26:57.17:0,57,1317	./.	./.	1/1:59,0:50:21.07:562,21,0	0/0:27,0:27:60.21:0,60,1499	0/0:23,0:23:39.12:0,39,818	0/0:25,0:25:41.16:0,41,948	0/0:31,0:31:57.18:0,57,1292	0/0:31,0:31:75.20:0,75,1746	0/0:30,0:30:51.15:0,51,1120	0/0:21,0:21:51.17:0,51,1196	0/0:23,0:23:42.13:0,42,1001	0/0:24,0:24:36.12:0,36,900	0/0:19,0:19:30.10:0,30,748	1/1:34,0:29:23.88:353,24,0	1/1:28,16:46:39.13:1334,39,0	1/1:35,2:41:15.05:322,15,0	0/0:23,0:23:33.11:0,33,792	0/0:16,0:17:30.10:0,30,693	0/0:27,0:26:57.15:0,57,1309	./.	0/0:33,0:33:63.21:0,63,1507	0/1:20,1:34:22.11:906,0,22	0/0:11,0:10:15.05:0,15,318
chr10	104934146	.	TTG	T	1971.26	PASS	AB=0.853;AC=13;AF=0.260;AN=50;BaseQRankSum=8.640;DP=786;FS=4.764;HRun=0;HaplotypeScore=117.1391;InbreedingCoeff=-0.0486;MQ=57.36;MQ0=16;MQRankSum=-1.022;QD=4.84;ReadPosRankSum=1.583;VQSLOD=2.8605;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,4:40:43.77:0,44,1089	0/0:5,0:16:21:0,21,200	1/1:26,0:7:0.47:1,0,0	0/0:30,0:8:5.44:0,5,24	0/0:27,0:27:57.15:0,57,818	./.	./.	0/1:48,8:40:63.32:63,0,234	0/0:26,2:28:34.72:0,35,966	0/1:22,2:24:20.78:21,0,581	0/1:21,2:22:30.06:30,0,472	0/0:23,1:26:13.66:0,14,643	0/0:22,1:23:30.86:0,31,724	0/1:26,3:29:46.23:46,0,660	0/0:30,2:31:12.29:0,12,1067	0/1:22,2:24:14.78:15,0,690	0/0:34,0:34:72.24:0,72,1106	0/0:24,0:24:48.13:0,48,716	0/1:27,8:26:99:167,0,165	1/1:19,18:32:57.12:639,57,0	0/1:50,32:75:99:719,0,109	0/0:23,0:23:30.44:0,30,625	0/0:24,0:24:41.69:0,42,559	0/1:24,6:31:68.23:68,0,768	./.	0/0:35,1:39:9.04:0,9,806	0/1:28,10:35:20.99:348,0,21	0/0:7,0:10:6:0,6,53
chr10	104934294	.	ATGTAGTCCCGGCTAGAATGGAATTCACTG	A	786.66	PASS	AB=0.806;AC=3;AF=0.060;AN=50;BaseQRankSum=5.517;DP=780;FS=3.425;HRun=0;HaplotypeScore=475.9493;InbreedingCoeff=-0.0700;MQ=52.38;MQ0=41;MQRankSum=-4.877;QD=8.03;ReadPosRankSum=-1.186;VQSLOD=-0.0900;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:99:0,111,11098	0/0:12,0:12:30.10:0,30,3221	0/0:46,0:6:18.06:0,18,1214	0/0:29,0:3:6.02:0,6,481	0/0:22,0:21:57.15:0,57,5614	./.	./.	0/0:29,0:9:15.82:0,16,1356	0/0:28,0:28:60.21:0,60,5757	0/0:42,0:42:99:0,114,9711	0/0:26,0:26:66.23:0,66,4264	0/0:40,0:40:99:0,99,12462	0/0:23,0:23:66.21:0,66,6936	0/0:39,0:39:99:0,99,11127	0/0:35,0:34:90.31:0,90,9913	0/0:30,0:30:75.25:0,75,8335	0/0:42,0:42:99:0,108,11937	0/0:24,0:24:60.19:0,60,6896	0/1:17,7:13:51.48:51,0,378	0/1:33,4:27:99:413,0,993	0/0:47,14:53:45.14:0,45,3001	0/0:17,0:17:42.11:0,42,4131	0/0:20,0:20:45.15:0,45,3547	0/0:32,0:32:87.29:0,87,9896	./.	0/0:35,0:34:90.24:0,90,6550	0/1:24,13:33:99:421,0,2689	0/0:6,0:6:15.05:0,15,1411
chr10	104935160	.	A	ATTG	935.76	PASS	AB=0.759;AC=3;AF=0.060;AN=50;BaseQRankSum=7.825;DP=672;FS=18.336;HRun=0;HaplotypeScore=121.0089;InbreedingCoeff=-0.0684;MQ=76.57;MQ0=0;MQRankSum=-7.389;QD=11.41;ReadPosRankSum=-1.132;VQSLOD=2.1095;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,1851	0/0:10,0:10:30.10:0,30,490	0/0:26,0:26:60.99:0,61,968	0/0:29,0:28:61.95:0,62,909	0/0:12,0:12:36.12:0,36,586	./.	./.	0/0:31,5:27:72.24:0,72,1153	0/0:29,0:29:81.28:0,81,1323	0/0:28,0:28:78.27:0,78,1272	0/0:12,0:12:33.11:0,33,539	0/0:31,0:31:84.29:0,84,1371	0/0:24,0:24:66.22:0,66,1059	0/0:28,0:28:72.25:0,72,1176	0/0:28,0:28:84.29:0,84,1370	0/0:23,0:23:69.24:0,69,1127	0/0:25,0:25:66.15:0,66,998	0/0:22,0:21:57.15:0,57,902	0/1:23,5:28:99:170,0,935	0/1:21,10:30:99:330,0,764	0/0:77,3:85:99:0,161,3051	0/0:22,0:22:57.19:0,57,931	0/0:24,0:24:69.21:0,69,1072	0/0:23,0:23:69.21:0,69,1097	./.	0/0:25,0:25:72.25:0,72,1176	0/1:12,8:20:99:535,0,387	0/0:2,0:2:6.02:0,6,98
chr10	104935693	.	TG	T	488.52	PASS	AB=0.767;AC=3;AF=0.060;AN=50;BaseQRankSum=8.260;DP=560;FS=2.911;HRun=1;HaplotypeScore=84.0259;InbreedingCoeff=-0.0639;MQ=92.63;MQ0=0;MQRankSum=-7.440;QD=4.98;ReadPosRankSum=-1.026;VQSLOD=0.1882;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,117,1859	0/0:10,0:10:30.10:0,30,480	0/0:37,0:37:99:0,99,1574	0/0:23,0:23:69.21:0,69,1031	0/0:17,0:17:51.17:0,51,815	./.	./.	0/1:22,8:30:99:215,0,809	0/0:18,0:18:54.17:0,54,837	0/0:22,0:22:66.23:0,66,1056	0/0:10,0:10:30.10:0,30,480	0/0:21,0:21:63.20:0,63,984	0/0:19,0:19:57.16:0,57,863	0/0:12,0:12:36.12:0,36,573	0/0:25,0:25:72.25:0,72,1150	0/0:10,0:10:30.10:0,30,479	0/0:23,0:23:69.24:0,69,1101	0/0:15,0:15:42.14:0,42,671	0/1:20,6:26:99:134,0,840	0/0:25,0:25:69.24:0,69,1101	0/1:24,18:37:99:239,0,904	0/0:30,0:30:90.28:0,90,1392	0/0:16,0:16:45.15:0,45,719	0/0:33,0:32:93.32:0,93,1486	./.	0/0:18,0:18:54.17:0,54,841	0/0:23,1:23:66.23:0,66,1051	0/0:10,0:10:30.10:0,30,478
chr10	104935950	.	GA	G	3123.66	PASS	AC=10;AF=0.200;AN=50;BaseQRankSum=12.369;DP=614;FS=1.273;HRun=7;HaplotypeScore=93.3722;InbreedingCoeff=0.9839;MQ=68.69;MQ0=1;MQRankSum=-2.405;QD=21.69;ReadPosRankSum=0.059;VQSLOD=2.8372;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,1252	0/0:6,0:6:18.06:0,18,225	0/0:38,2:36:28.81:0,29,784	0/0:24,0:22:27.70:0,28,493	0/0:25,0:25:60.19:0,60,755	./.	./.	1/1:7,28:32:75.15:758,75,0	0/0:25,0:25:75.24:0,75,941	0/0:27,0:27:72.20:0,72,888	0/0:13,0:13:33.11:0,33,414	0/0:26,0:26:75.21:0,75,917	0/0:32,0:32:84.26:0,84,1044	0/0:17,0:17:42.13:0,42,518	0/0:30,0:30:84.24:0,84,1039	0/0:28,0:28:78.25:0,78,979	0/0:20,0:20:54.17:0,54,679	0/0:27,0:26:78.21:0,78,951	1/1:4,21:24:54.11:547,54,0	1/1:3,28:30:78.18:795,78,0	1/1:1,19:19:42.09:428,42,0	0/0:25,0:25:66.21:0,66,829	0/0:23,0:23:53.52:0,54,637	0/0:17,0:17:45.13:0,45,552	./.	0/0:25,0:25:69.19:0,69,833	1/1:1,32:30:75.17:765,75,0	0/0:3,0:3:9.03:0,9,113
chr10	104935992	.	CAAG	C	200.19	PASS	AB=0.795;AC=2;AF=0.040;AN=50;BaseQRankSum=5.887;DP=641;FS=0.000;HRun=0;HaplotypeScore=120.3906;InbreedingCoeff=-0.0459;MQ=71.29;MQ0=1;MQRankSum=-5.129;QD=2.36;ReadPosRankSum=0.027;VQSLOD=1.9560;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.28:0,81,1734	0/0:5,0:5:15.05:0,15,325	0/0:25,0:23:51.17:0,51,1050	0/0:30,0:29:51.33:0,51,1109	0/0:32,0:32:87.28:0,87,1802	./.	./.	0/0:38,4:40:18.12:0,18,1893	0/0:29,0:29:78.22:0,78,1554	0/0:21,0:21:51.18:0,51,1094	0/0:19,0:19:45.15:0,45,939	0/0:26,0:26:75.25:0,75,1584	0/0:31,0:31:90.31:0,90,1944	0/0:11,0:11:30.10:0,30,649	0/0:25,0:25:75.24:0,75,1551	0/0:35,0:35:99:0,102,2069	0/0:16,0:16:42.14:0,42,891	0/0:31,0:30:76.79:0,77,1507	0/0:24,5:25:7.58:0,8,926	0/1:26,7:32:99:153,0,1301	0/0:29,1:29:63.22:0,63,1364	0/0:25,0:25:66.23:0,66,1399	0/0:16,0:16:45.14:0,45,933	0/0:14,0:14:39.07:0,39,780	./.	0/0:22,0:22:60.20:0,60,1251	0/1:36,16:47:99:135,0,1662	0/0:11,0:11:33.02:0,33,623
chr10	104936143	.	CAG	C	4033.52	PASS	AB=0.623;AC=5;AF=0.100;AN=50;BaseQRankSum=11.582;DP=601;FS=0.394;HRun=0;HaplotypeScore=103.4366;InbreedingCoeff=-0.1112;MQ=77.62;MQ0=0;MQRankSum=-0.527;QD=22.16;ReadPosRankSum=-0.944;VQSLOD=3.7680;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1948	0/0:8,0:8:24.07:0,24,410	0/0:28,0:28:78.22:0,78,1337	0/0:23,0:23:51.14:0,51,981	0/0:21,0:21:63.17:0,63,1036	./.	./.	0/1:19,21:40:99:726,0,315	0/0:26,0:26:75.26:0,75,1367	0/0:21,0:21:63.20:0,63,1073	0/0:11,0:11:33.10:0,33,572	0/0:19,0:19:54.17:0,54,938	0/0:21,0:21:57.18:0,57,1009	0/0:13,0:13:39.12:0,39,679	0/0:24,0:24:69.24:0,69,1251	0/0:21,0:21:60.21:0,60,1093	0/0:24,0:24:63.20:0,63,1124	0/0:20,0:20:60.19:0,60,1067	0/1:18,16:34:99:721,0,405	0/1:13,22:31:83.14:862,0,83	0/1:14,25:39:99:864,0,133	0/0:25,0:25:75.24:0,75,1340	0/0:33,0:33:99:0,99,1777	0/0:12,0:12:36.12:0,36,660	./.	0/0:20,0:20:54.19:0,54,987	0/1:7,27:34:99:862,0,120	0/0:12,0:12:36.12:0,36,659
chr10	104936591	.	GGGCTGATGAGAT	G	6091.60	PASS	AB=0.610;AC=9;AF=0.180;AN=50;BaseQRankSum=11.662;DP=503;FS=3.971;HRun=0;HaplotypeScore=194.8069;InbreedingCoeff=0.8553;MQ=61.43;MQ0=1;MQRankSum=-10.902;QD=68.44;ReadPosRankSum=-2.009;VQSLOD=4.4669;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,6650	0/0:10,0:10:30.10:0,30,1833	0/0:23,0:23:63.20:0,63,3203	0/0:22,0:20:47.40:0,47,2476	0/0:22,0:22:60.21:0,60,3714	./.	./.	1/1:5,19:24:57.15:1835,57,0	0/0:20,0:20:60.21:0,60,3506	0/0:23,0:23:69.23:0,69,3585	0/0:16,0:16:48.16:0,48,2970	0/0:18,0:18:51.18:0,51,2985	0/0:16,0:16:45.15:0,45,2643	0/0:19,0:19:54.17:0,54,2888	0/0:27,0:27:81.28:0,81,4637	0/0:22,0:22:66.23:0,66,3960	0/0:17,0:17:51.18:0,51,2713	0/0:29,0:29:87.30:0,87,5191	1/1:2,10:11:27.09:941,27,0	0/1:9,16:23:99:1320,0,381	1/1:1,6:7:12.04:401,12,0	0/0:16,0:16:48.16:0,48,2619	0/0:14,0:14:39.13:0,39,2386	0/0:26,0:26:75.21:0,75,3849	./.	0/0:22,0:22:66.23:0,66,3784	1/1:2,19:20:42.38:1595,42,0	0/0:11,0:11:33.11:0,33,2046
chr10	104936753	.	T	TA	2996.17	PASS	AC=10;AF=0.200;AN=50;BaseQRankSum=-7.332;DP=509;FS=0.906;HRun=6;HaplotypeScore=56.0484;InbreedingCoeff=0.9811;MQ=57.55;MQ0=0;MQRankSum=-0.194;QD=23.05;ReadPosRankSum=-2.333;VQSLOD=2.1897;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,108,1092	0/0:8,0:8:24.05:0,24,245	0/0:10,0:10:26.60:0,27,225	0/0:9,0:6:9.02:0,9,92	0/0:25,0:25:69.12:0,69,690	./.	./.	1/1:18,32:49:38.89:1059,39,0	0/0:15,0:15:39.07:0,39,389	0/0:29,0:29:81.18:0,81,825	0/0:25,0:25:66.13:0,66,666	0/0:13,0:13:36.08:0,36,367	0/0:18,0:18:54.11:0,54,544	0/0:12,0:12:33.05:0,33,328	0/0:21,0:21:60.12:0,60,605	0/0:15,0:15:42.09:0,42,428	0/0:34,0:34:99:0,99,1010	0/0:25,0:25:63.14:0,63,642	1/1:2,15:17:48.15:596,48,0	1/1:10,21:29:30.01:687,30,0	1/1:2,9:11:21.07:264,21,0	0/0:13,0:13:30.05:0,30,299	0/0:14,0:14:36.08:0,36,367	0/0:6,0:6:18:0,18,173	./.	0/0:30,0:30:87.18:0,87,877	1/1:3,18:20:20.92:560,21,0	0/0:15,0:15:45.10:0,45,458
chr10	104938284	.	CT	C	273.53	PASS	AB=0.791;AC=3;AF=0.060;AN=50;BaseQRankSum=8.025;DP=800;FS=5.458;HRun=1;HaplotypeScore=124.4204;InbreedingCoeff=-0.0730;MQ=67.58;MQ0=0;MQRankSum=-7.396;QD=2.63;ReadPosRankSum=-0.595;VQSLOD=-0.6108;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,2066	0/0:17,0:17:51.17:0,51,806	0/0:29,0:28:78.14:0,78,1110	0/0:28,0:28:83.63:0,84,1206	0/0:38,0:38:99:0,108,1671	./.	./.	0/1:28,7:33:73.01:73,0,1141	0/0:33,0:33:99:0,99,1550	0/0:34,0:34:99:0,102,1567	0/0:23,0:23:69.24:0,69,1096	0/0:33,0:33:96.30:0,96,1478	0/0:32,0:32:96.33:0,96,1525	0/0:39,0:39:99:0,117,1843	0/0:27,0:27:81.26:0,81,1270	0/0:41,0:41:99:0,123,1959	0/0:35,0:35:99:0,105,1652	0/0:23,0:23:66.22:0,66,1055	0/1:22,8:29:90.17:90,0,885	0/0:24,4:26:1.81:0,2,909	0/0:57,1:58:81.28:0,81,1527	0/0:36,0:36:99:0,108,1674	0/0:27,0:27:81.26:0,81,1263	0/0:33,0:33:96.33:0,96,1535	./.	0/0:29,0:29:87.29:0,87,1368	0/1:26,13:36:99:209,0,726	0/0:8,0:8:24.08:0,24,381
chr10	104938829	.	AG	A	1168.73	PASS	AB=0.765;AC=4;AF=0.080;AN=50;BaseQRankSum=10.316;DP=723;FS=31.899;HRun=1;HaplotypeScore=108.5744;InbreedingCoeff=-0.0896;MQ=74.73;MQ0=3;MQRankSum=-6.247;QD=7.49;ReadPosRankSum=3.262;VQSLOD=-0.7492;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.28:0,87,1367	0/0:17,0:17:51.16:0,51,791	0/0:30,0:30:90.29:0,90,1375	0/0:27,0:27:71.78:0,72,1080	0/0:36,0:36:99:0,108,1695	./.	./.	0/0:39,4:39:99:0,117,1808	0/0:34,0:34:99:0,102,1630	0/0:36,0:36:99:0,108,1700	0/0:29,0:29:87.30:0,87,1386	0/0:33,0:33:99:0,99,1577	0/0:33,0:33:96.33:0,96,1529	0/0:19,0:19:57.18:0,57,886	0/0:23,0:23:69.24:0,69,1103	0/0:20,0:20:60.20:0,60,956	0/0:26,0:26:72.24:0,72,1142	0/0:15,0:15:45.15:0,45,711	0/1:22,7:27:99:132,0,829	0/1:35,16:50:99:445,0,1412	0/1:29,10:39:99:263,0,1276	0/0:29,0:29:87.28:0,87,1363	0/0:24,0:24:72.25:0,72,1149	0/0:26,0:26:75.21:0,75,1168	./.	0/0:35,0:35:99:0,105,1673	0/1:21,16:34:99:437,0,882	0/0:3,0:3:9.03:0,9,144
chr10	104939506	.	T	TGGG	719.52	PASS	AC=8;AF=0.160;AN=50;BaseQRankSum=6.514;DP=352;FS=9.415;HRun=4;HaplotypeScore=61.8208;InbreedingCoeff=0.8432;MQ=76.76;MQ0=1;MQRankSum=-4.467;QD=23.21;ReadPosRankSum=-2.391;VQSLOD=-0.6378;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.31:0,90,1380	0/0:2,0:2:2.98:0,3,22	0/0:23,0:21:46.96:0,47,800	0/0:13,0:12:24.17:0,24,347	0/0:23,0:23:57.19:0,57,870	./.	./.	1/1:5,3:6:9.02:108,9,0	0/0:14,0:14:39.13:0,39,595	0/0:16,0:16:45.14:0,45,655	0/0:18,0:18:48.16:0,48,736	0/0:20,0:19:54.18:0,54,825	0/0:18,0:18:54.14:0,54,783	0/0:14,0:14:42.13:0,42,622	0/0:18,0:18:54.18:0,54,827	0/0:18,0:18:42.14:0,42,642	0/0:17,0:16:45.12:0,45,646	0/0:11,0:11:30.10:0,30,455	0/0:2,1:1:2.99:0,3,23	1/1:2,4:5:12.04:259,12,0	1/1:3,5:7:6.02:129,6,0	0/0:12,0:12:36.11:0,36,530	0/0:16,0:16:42.14:0,42,641	0/0:13,0:13:39.13:0,39,598	./.	0/0:16,0:16:39.13:0,39,598	1/1:3,5:7:18.06:364,18,0	0/0:5,0:5:15.05:0,15,230
chr10	104941627	.	T	TTA	242.01	PASS	AB=0.823;AC=3;AF=0.060;AN=50;BaseQRankSum=5.305;DP=425;FS=4.356;HRun=0;HaplotypeScore=55.0265;InbreedingCoeff=-0.0716;MQ=55.12;MQ0=34;MQRankSum=-2.480;QD=4.25;ReadPosRankSum=-1.874;VQSLOD=1.2866;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:78.27:0,78,1252	0/0:9,0:8:15.05:0,15,241	0/0:23,0:11:16.09:0,16,216	0/0:13,0:7:14.99:0,15,199	0/0:24,0:23:57.19:0,57,900	./.	./.	0/0:33,1:30:17.38:0,17,1067	0/0:14,0:14:42.13:0,42,644	0/0:27,0:22:66.01:0,66,1030	0/0:21,0:21:57.19:0,57,917	0/0:14,0:14:33.11:0,33,522	0/0:14,0:14:39.06:0,39,571	0/0:12,0:12:36.12:0,36,579	0/0:10,0:9:24.08:0,24,383	0/0:15,0:15:42.14:0,42,680	0/0:16,0:16:45.13:0,45,689	0/0:10,0:9:27.09:0,27,434	0/0:17,0:14:39.10:0,39,585	0/1:26,10:31:99:270,0,995	0/1:4,2:5:48.67:49,0,134	0/0:7,0:5:15.05:0,15,242	0/0:24,0:23:63.20:0,63,995	0/0:9,0:7:21.07:0,21,338	./.	0/0:21,0:21:63.12:0,63,962	0/1:14,1:13:21.30:21,0,508	0/0:5,0:3:6.02:0,6,96
chr10	104942633	.	GC	G	3695.61	PASS	AB=0.587;AC=8;AF=0.167;AN=48;BaseQRankSum=11.780;DP=557;FS=0.418;HRun=1;HaplotypeScore=58.0442;InbreedingCoeff=0.6575;MQ=54.08;MQ0=38;MQRankSum=2.499;QD=27.79;ReadPosRankSum=-1.534;VQSLOD=2.9920;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.23:0,84,1289	0/0:9,0:9:27.09:0,27,431	./.	0/0:26,0:3:3.01:0,3,48	0/0:32,0:31:84.27:0,84,1315	./.	./.	1/1:8,23:18:48.10:618,48,0	0/0:26,0:26:78.27:0,78,1245	0/0:22,0:22:66.23:0,66,1055	0/0:28,0:27:81.19:0,81,1261	0/0:12,0:12:36.12:0,36,573	0/0:27,0:27:81.26:0,81,1270	0/0:16,0:16:48.14:0,48,737	0/0:18,0:18:54.18:0,54,863	0/0:29,0:29:84.29:0,84,1340	0/0:24,0:23:69.24:0,69,1102	0/0:18,0:18:54.18:0,54,859	0/1:8,16:15:50.78:500,0,51	0/1:8,23:30:99:773,0,189	1/1:0,21:21:57.19:797,57,0	0/0:19,0:19:51.16:0,51,792	0/0:17,0:17:51.16:0,51,789	0/0:23,0:23:69.24:0,69,1100	./.	0/0:28,0:26:75.25:0,75,1177	1/1:1,25:26:72.24:1007,72,0	0/0:5,0:5:15.05:0,15,240
chr10	104943086	.	GC	G	1186.69	PASS	AB=0.758;AC=5;AF=0.109;AN=46;BaseQRankSum=11.335;DP=631;FS=16.256;HRun=3;HaplotypeScore=81.4455;InbreedingCoeff=-0.1240;MQ=53.14;MQ0=47;MQRankSum=-4.414;QD=6.25;ReadPosRankSum=0.249;VQSLOD=-0.4861;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1726	0/0:9,0:9:18.06:0,18,259	./.	./.	0/0:19,0:19:51.17:0,51,734	./.	./.	0/1:30,16:38:99:170,0,1080	0/0:28,0:28:84.27:0,84,1192	0/0:17,0:17:45.14:0,45,630	0/0:21,0:21:57.19:0,57,819	0/0:18,0:18:51.17:0,51,734	0/0:19,0:19:57.18:0,57,802	0/0:22,0:22:63.19:0,63,887	0/0:23,0:23:66.22:0,66,950	0/0:15,0:15:42.14:0,42,604	0/0:23,0:23:69.23:0,69,993	0/0:22,0:22:66.22:0,66,951	0/1:15,4:15:32.18:32,0,471	0/1:23,11:33:99:169,0,901	0/1:36,30:63:99:741,0,1211	0/0:31,0:30:87.29:0,87,1253	0/0:25,0:25:72.24:0,72,1035	0/0:25,0:25:75.24:0,75,1059	./.	0/0:30,0:29:87.29:0,87,1251	0/1:18,7:25:99:188,0,661	0/0:4,0:4:12.02:0,12,154
chr10	104943591	.	G	GACTT	1254.50	PASS	AB=0.579;AC=7;AF=0.146;AN=48;BaseQRankSum=7.801;DP=609;FS=0.838;HRun=0;HaplotypeScore=121.4150;InbreedingCoeff=0.8578;MQ=73.73;MQ0=5;MQRankSum=-7.916;QD=32.17;ReadPosRankSum=0.291;VQSLOD=3.7205;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,162,3178	0/0:14,0:14:39.13:0,39,818	0/0:30,0:30:90.27:0,90,1791	0/0:26,0:25:69.23:0,69,1348	0/0:21,0:21:63.22:0,63,1321	./.	./.	1/1:6,6:8:21.07:440,21,0	0/0:47,0:47:99:0,135,2711	0/0:22,0:22:66.23:0,66,1372	0/0:13,0:13:39.13:0,39,805	0/0:27,0:27:81.28:0,81,1692	0/0:27,0:27:81.26:0,81,1646	0/0:27,0:27:81.28:0,81,1685	0/0:47,0:47:99:0,141,2888	0/0:38,0:38:99:0,114,2380	0/0:35,0:35:99:0,105,2176	0/0:17,0:17:48.16:0,48,1007	1/1:2,5:6:15.05:332,15,0	1/1:2,7:7:18.06:384,18,0	0/1:3,8:7:6.29:241,0,6	0/0:24,0:24:72.25:0,72,1491	0/0:20,0:20:57.18:0,57,1158	0/0:31,0:31:90.31:0,90,1869	./.	0/0:35,0:35:99:0,105,2158	./.	0/0:11,0:11:33.11:0,33,692
chr10	104943592	.	G	GAGT	1072.33	PASS	AC=8;AF=0.160;AN=50;BaseQRankSum=8.403;DP=614;FS=0.000;HRun=0;HaplotypeScore=110.3246;InbreedingCoeff=0.9459;MQ=73.32;MQ0=5;MQRankSum=-8.458;QD=23.31;ReadPosRankSum=-0.496;VQSLOD=3.3519;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,147,2680	0/0:14,0:14:42.13:0,42,753	0/0:29,0:29:84.29:0,84,1517	0/0:25,0:24:69.23:0,69,1197	0/0:21,0:21:63.22:0,63,1172	./.	./.	1/1:8,6:9:20.74:324,21,0	0/0:47,0:47:99:0,132,2366	0/0:22,0:22:66.22:0,66,1189	0/0:13,0:13:39.13:0,39,710	0/0:28,0:28:81.28:0,81,1507	0/0:26,0:26:78.27:0,78,1451	0/0:27,0:27:81.27:0,81,1479	0/0:47,0:47:99:0,138,2551	0/0:38,0:38:99:0,114,2100	0/0:35,0:35:99:0,105,1924	0/0:18,0:18:48.16:0,48,895	1/1:3,5:6:15.05:267,15,0	1/1:3,7:8:18.06:306,18,0	1/1:6,8:9:21.04:327,21,0	0/0:25,0:25:72.24:0,72,1312	0/0:19,0:19:57.18:0,57,1031	0/0:32,0:32:90.29:0,90,1646	./.	0/0:34,0:34:99:0,102,1892	0/0:3,2:4:0:0,0,0	0/0:11,0:11:33.11:0,33,615
chr10	104944008	.	AAGGTG	A	646.95	PASS	AC=10;AF=0.200;AN=50;BaseQRankSum=6.353;DP=535;FS=3.578;HRun=0;HaplotypeScore=108.2486;InbreedingCoeff=0.8938;MQ=73.76;MQ0=7;MQRankSum=-4.224;QD=19.60;ReadPosRankSum=-2.941;VQSLOD=2.4659;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,3840	0/0:11,0:11:33.11:0,33,1011	0/0:27,0:23:36.02:0,36,1620	0/0:35,0:31:81.21:0,81,2041	0/0:25,0:25:63.22:0,63,1823	./.	./.	1/1:1,4:2:3.01:62,3,0	0/0:14,0:14:42.14:0,42,1271	0/0:29,0:29:87.30:0,87,2634	0/0:25,0:25:63.22:0,63,1836	0/0:22,0:22:57.18:0,57,1605	0/0:18,0:18:51.17:0,51,1446	0/0:26,0:26:72.25:0,72,2084	0/0:29,0:29:84.27:0,84,2402	0/0:19,0:19:54.17:0,54,1426	0/0:29,0:29:81.28:0,81,2365	0/0:22,0:22:60.21:0,60,1790	1/1:0,4:2:5.99:84,6,0	1/1:3,7:6:15.01:268,15,0	1/1:3,1:3:6:72,6,0	0/0:32,0:32:87.30:0,87,2603	0/0:30,0:30:78.27:0,78,2394	0/0:27,0:27:78.27:0,78,2373	./.	0/0:25,0:25:72.25:0,72,2195	1/1:1,9:7:15.05:310,15,0	0/0:11,0:11:30.10:0,30,881
chr10	104945264	.	A	AC	5133.36	PASS	AC=10;AF=0.200;AN=50;BaseQRankSum=15.798;DP=698;FS=4.692;HRun=1;HaplotypeScore=98.7182;InbreedingCoeff=0.9980;MQ=83.26;MQ0=11;MQRankSum=-5.367;QD=38.02;ReadPosRankSum=0.827;VQSLOD=5.0121;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,2053	0/0:13,0:13:39.13:0,39,545	0/0:29,0:29:84.08:0,84,1115	0/0:25,0:25:69.23:0,69,952	0/0:22,0:22:66.22:0,66,921	./.	./.	1/1:2,27:26:72.22:1107,72,0	0/0:28,0:28:81.27:0,81,1131	0/0:31,0:31:93.30:0,93,1286	0/0:25,0:25:75.23:0,75,1016	0/0:36,0:36:99:0,108,1487	0/0:27,0:27:81.27:0,81,1132	0/0:31,0:31:93.31:0,93,1297	0/0:32,0:32:96.29:0,96,1308	0/0:20,0:20:54.18:0,54,755	0/0:42,0:42:99:0,114,1572	0/0:14,0:14:39.13:0,39,544	1/1:1,21:19:57.19:911,57,0	1/1:1,20:17:42.14:671,42,0	1/1:2,33:32:87.30:1391,87,0	0/0:31,0:31:90.29:0,90,1238	0/0:42,0:42:99:0,120,1677	0/0:29,0:28:78.23:0,78,1054	./.	0/0:30,0:30:84.28:0,84,1175	1/1:0,28:23:66.23:1054,66,0	0/0:6,0:6:18.06:0,18,251
chr10	104945725	.	G	GTGTTATATGTCTACATA	11962.98	PASS	AB=0.875;AC=6;AF=0.120;AN=50;BaseQRankSum=5.984;DP=819;FS=7.456;HRun=0;HaplotypeScore=403.1740;InbreedingCoeff=0.2158;MQ=62.56;MQ0=14;MQRankSum=-11.706;QD=67.59;ReadPosRankSum=-2.274;VQSLOD=3.3863;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:52:99:0,144,5889	0/0:16,0:16:39.12:0,39,1512	0/0:32,0:21:3.71:0,4,1239	0/0:22,0:17:42.14:0,42,1654	0/0:32,0:31:81.26:0,81,3300	./.	./.	0/1:58,0:46:99:2990,0,1281	0/0:53,0:53:99:0,150,6477	0/0:39,0:39:93.79:0,94,3874	0/0:22,0:21:63.22:0,63,2672	0/0:38,0:38:99:0,99,4297	0/0:41,0:41:99:0,111,4473	0/0:36,0:36:99:0,105,4448	0/0:49,0:49:99:0,135,5709	0/0:40,0:40:99:0,102,4137	0/0:18,0:17:45.14:0,45,1941	0/0:17,0:17:48.16:0,48,2023	0/1:27,4:19:99:2614,0,312	0/1:30,9:37:99:3974,0,107	0/1:24,1:29:99:1162,0,239	0/0:34,0:34:84.29:0,84,3390	0/0:25,0:25:69.12:0,69,2824	0/0:32,0:32:96.31:0,96,4033	./.	0/0:34,0:34:81.26:0,81,3239	1/1:15,2:13:21.07:1224,21,0	0/0:9,0:9:18.01:0,18,521
chr10	104946449	.	CT	C	738.89	PASS	AB=0.755;AC=5;AF=0.109;AN=46;BaseQRankSum=6.015;DP=712;FS=8.625;HRun=3;HaplotypeScore=79.7647;InbreedingCoeff=-0.1228;MQ=45.84;MQ0=108;MQRankSum=-5.198;QD=3.69;ReadPosRankSum=0.536;VQSLOD=-0.2669;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:99:0,138,1982	0/0:15,0:15:42.14:0,42,603	./.	./.	0/0:29,0:29:75.23:0,75,1042	./.	./.	0/1:21,18:19:99:348,0,105	0/0:31,0:29:78.12:0,78,1020	0/0:30,0:28:81.27:0,81,1144	0/0:17,0:17:39.10:0,39,509	0/0:29,0:29:75.12:0,75,1015	0/0:27,0:27:75.18:0,75,1036	0/0:21,0:20:48.16:0,48,689	0/0:24,0:23:69.16:0,69,968	0/0:27,0:26:69.19:0,69,964	0/0:30,0:30:78.23:0,78,1064	0/0:28,0:27:81.19:0,81,1087	0/1:18,10:10:90.35:90,0,151	0/1:27,17:36:99:249,0,677	0/1:40,8:33:99:113,0,663	0/0:23,0:23:60.17:0,60,826	0/0:15,0:15:45.15:0,45,647	0/0:20,0:18:48.09:0,48,666	./.	0/0:26,0:25:75.25:0,75,1079	0/1:29,12:30:50.95:51,0,647	0/0:5,0:5:15.05:0,15,216
chr10	104946612	.	AGGG	A	2363.75	PASS	AC=10;AF=0.200;AN=50;BaseQRankSum=10.490;DP=449;FS=33.153;HRun=10;HaplotypeScore=88.2843;InbreedingCoeff=0.9249;MQ=73.18;MQ0=0;MQRankSum=-3.124;QD=21.69;ReadPosRankSum=2.529;VQSLOD=0.0087;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:57.16:0,57,1054	0/0:8,0:8:6.02:0,6,124	0/0:16,0:14:21.03:0,21,302	0/0:16,0:18:3.12:0,3,361	0/0:24,0:24:42.11:0,42,749	./.	./.	1/1:7,20:21:42.11:555,42,0	0/0:21,0:21:48.16:0,48,979	0/0:15,0:15:36.12:0,36,744	0/0:15,0:15:21.06:0,21,384	0/0:19,0:19:42.14:0,42,810	0/0:14,0:14:24.07:0,24,453	0/0:11,0:12:33.08:0,33,585	0/0:19,0:19:33.10:0,33,637	0/0:12,0:13:27.07:0,27,501	0/0:21,0:22:51.14:0,51,972	0/0:18,0:18:42.14:0,42,857	1/1:8,6:12:12.02:164,12,0	1/1:6,8:14:30.05:384,30,0	1/1:6,21:22:36.07:486,36,0	0/0:17,0:17:45.13:0,45,839	0/0:11,0:11:24.08:0,24,460	0/0:27,0:27:57.20:0,57,1166	./.	0/0:18,0:18:36.11:0,36,692	1/1:0,27:24:69.23:942,69,0	0/0:7,0:7:21.07:0,21,386
chr10	104946959	.	T	TCA	4778.51	PASS	AB=0.715;AC=8;AF=0.160;AN=50;BaseQRankSum=-8.752;DP=881;FS=4.687;HRun=0;HaplotypeScore=134.7886;InbreedingCoeff=0.6924;MQ=60.19;MQ0=5;MQRankSum=1.957;QD=25.69;ReadPosRankSum=-3.339;VQSLOD=5.0671;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:61:99:0,105,1402	0/0:10,0:10:24.03:0,24,275	0/0:41,0:27:53.15:0,53,586	0/0:36,0:16:11.77:0,12,176	0/0:32,0:32:62.91:0,63,729	./.	./.	0/1:19,12:25:32.23:575,0,32	0/0:47,0:48:93.27:0,93,1256	0/0:42,0:40:74.59:0,75,1086	0/0:24,0:21:51.15:0,51,610	0/0:45,0:45:99:0,102,1190	0/0:43,0:43:99:0,108,1310	0/0:34,0:35:69.17:0,69,801	0/0:30,0:30:75.21:0,75,897	0/0:27,0:28:78.03:0,78,897	0/0:34,0:35:84.19:0,84,976	0/0:24,0:24:60.14:0,60,699	1/1:12,11:22:35.48:524,35,0	1/1:7,24:31:63.21:1006,63,0	0/1:42,30:71:44.37:1817,0,44	0/0:37,0:37:74.90:0,75,924	0/0:41,0:40:99:0,99,1189	0/0:46,0:45:88.91:0,89,1251	./.	0/0:30,0:30:75.21:0,75,891	1/1:13,14:27:26.75:857,27,0	0/0:6,0:6:18.06:0,18,218
chr10	104947310	.	CAT	C	7735.21	PASS	AB=0.734;AC=5;AF=0.100;AN=50;BaseQRankSum=-0.794;DP=2282;FS=3.354;HRun=0;HaplotypeScore=578.8989;InbreedingCoeff=-0.1111;MQ=47.38;MQ0=8;MQRankSum=11.003;QD=14.57;ReadPosRankSum=-0.790;VQSLOD=3.9111;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:116,0:115:99:0,294,5379	0/0:25,0:24:66.23:0,66,1267	0/0:72,0:45:97.15:0,97,1704	0/0:79,0:51:99:0,121,1805	0/0:80,0:65:99:0,146,2531	./.	./.	0/1:58,41:91:99:1466,0,1468	0/0:103,0:98:99:0,241,4410	0/0:128,0:112:99:0,334,5952	0/0:64,0:49:99:0,123,2180	0/0:106,0:97:99:0,232,4244	0/0:114,0:106:99:0,292,5277	0/0:97,0:90:99:0,217,4045	0/0:135,0:122:99:0,295,5298	0/0:115,0:103:99:0,256,4496	0/0:61,0:59:99:0,153,2803	0/0:39,0:38:98.75:0,99,1694	0/1:45,15:52:99:625,0,1049	0/1:58,28:81:99:846,0,2163	0/1:133,85:215:99:3790,0,3169	0/0:96,0:75:99:0,181,3255	0/0:78,0:63:99:0,150,2668	0/0:99,0:94:99:0,194,3487	./.	0/0:115,0:105:99:0,307,5552	0/1:37,31:60:99:1009,0,862	0/0:29,0:26:78.24:0,78,1437
chr10	104947409	.	T	TCA	8971.46	PASS	AB=0.794;AC=20;AF=0.400;AN=50;BaseQRankSum=22.520;DP=1693;FS=2.486;HRun=0;HaplotypeScore=355.4112;InbreedingCoeff=-0.6779;MQ=49.50;MQ0=24;MQRankSum=-15.611;QD=6.25;ReadPosRankSum=-0.690;VQSLOD=3.3669;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:49,33:82:99:930,0,1311	0/0:22,3:23:6.38:0,6,740	0/0:66,2:29:75.12:0,75,963	0/0:78,3:38:76.55:0,77,923	0/0:28,12:36:18.59:0,19,911	./.	./.	0/1:68,13:58:99:152,0,1314	0/1:58,27:79:99:484,0,1827	0/1:38,28:59:99:879,0,1023	0/0:34,9:35:51.50:0,52,1102	0/1:53,30:76:99:772,0,1767	0/1:61,22:79:99:372,0,1964	0/1:44,21:62:99:342,0,1414	0/1:70,35:97:99:549,0,2120	0/1:51,28:70:99:675,0,1572	0/1:42,11:51:99:358,0,1028	0/1:41,12:51:99:670,0,1062	0/1:44,12:47:99:470,0,849	0/1:49,8:55:99:174,0,1280	0/1:100,27:122:99:572,0,2074	0/1:46,9:52:99:121,0,1396	0/1:43,11:51:37.84:38,0,1437	0/1:54,28:76:99:560,0,1419	./.	0/1:62,23:77:99:297,0,2211	0/1:37,12:48:99:418,0,1099	0/1:28,4:29:99:140,0,776
chr10	104948109	.	A	AGTGT	82.32	PASS	AB=0.941;AC=10;AF=0.333;AN=30;BaseQRankSum=-2.436;DP=536;FS=0.000;HRun=0;HaplotypeScore=75.9377;InbreedingCoeff=0.4013;MQ=22.33;MQ0=251;MQRankSum=-1.362;QD=0.66;ReadPosRankSum=-2.023;VQSLOD=1.1680;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/1:13,0:10:0:0,0,0	./.	./.	./.	1/1:15,0:4:2.94:18,3,0	0/0:19,0:12:3.01:0,3,45	0/0:18,0:12:3.01:0,3,47	1/1:17,5:17:5.45:140,5,0	0/1:11,0:6:0:0,0,0	./.	0/0:16,4:13:0:0,0,0	0/0:21,0:12:2.53:0,3,45	0/0:22,0:6:3.01:0,3,46	1/1:14,0:2:1.25:3,1,0	./.	0/0:25,0:27:15.02:0,15,139	./.	./.	0/0:16,8:16:0:0,0,0	1/1:41,2:13:2.64:12,3,0	./.	0/0:20,0:12:3.01:0,3,46	0/0:20,0:17:17.81:0,18,167	./.
chr10	104951922	.	G	GA	3684.75	PASS	AB=0.553;AC=9;AF=0.180;AN=50;BaseQRankSum=0.562;DP=599;FS=0.813;HRun=8;HaplotypeScore=87.2909;InbreedingCoeff=0.8698;MQ=73.95;MQ0=1;MQRankSum=0.256;QD=24.90;ReadPosRankSum=-1.266;VQSLOD=3.5946;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.04:0,81,741	0/0:9,0:9:21.01:0,21,192	0/0:25,0:18:39.70:0,40,348	0/0:28,0:19:32.44:0,32,272	0/0:25,0:25:63.03:0,63,576	./.	./.	1/1:9,23:31:66.20:762,66,0	0/0:16,0:16:44.93:0,45,402	0/0:29,0:29:72.03:0,72,658	0/0:13,0:13:39.02:0,39,357	0/0:21,0:21:54.02:0,54,494	0/0:20,0:20:54.02:0,54,494	0/0:21,0:21:54.03:0,54,494	0/0:26,0:26:72.03:0,72,659	0/0:16,0:16:42.01:0,42,384	0/0:38,0:38:99:0,105,960	0/0:15,0:16:23.84:0,24,336	1/1:8,20:28:62.40:698,62,0	1/1:4,24:28:64.03:713,64,0	1/1:7,32:39:99:1140,99,0	0/0:16,0:17:44.04:0,44,386	0/0:22,0:22:63.02:0,63,571	0/0:33,0:33:92.95:0,93,835	./.	0/0:27,0:27:63.03:0,63,577	0/1:4,17:19:13.05:372,0,13	0/0:17,0:15:39.02:0,39,357
chr10	104951938	.	ATG	A	895.38	PASS	AB=0.916;AC=9;AF=0.180;AN=50;BaseQRankSum=10.038;DP=634;FS=1.877;HRun=0;HaplotypeScore=112.8197;InbreedingCoeff=0.5205;MQ=62.74;MQ0=11;MQRankSum=-1.690;QD=6.13;ReadPosRankSum=0.206;VQSLOD=3.3891;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:36.12:0,36,932	0/0:1,0:9:14.99:0,15,132	0/0:39,0:16:14.96:0,15,167	0/0:34,0:14:19.25:0,19,204	0/0:30,2:32:39.21:0,39,1025	./.	./.	1/1:21,1:21:17.05:220,17,0	0/0:15,2:17:4.53:0,5,512	0/0:28,1:29:8.40:0,8,611	0/0:14,0:13:21.07:0,21,321	0/0:20,0:20:50.38:0,50,744	0/0:21,1:22:27.25:0,27,889	0/0:19,0:19:9.42:0,9,618	0/0:26,0:26:48.13:0,48,711	0/0:18,0:18:39.02:0,39,545	0/0:40,0:40:54.66:0,55,1244	0/0:21,0:19:45.07:0,45,635	1/1:22,2:22:31.90:271,32,0	0/0:27,0:27:7.18:0,7,46	1/1:31,5:36:32.07:335,32,0	0/0:22,0:22:42.11:0,42,616	0/1:23,3:26:47.51:48,0,712	0/0:35,1:36:48:0,48,1191	./.	0/0:26,0:26:60.16:0,60,870	0/1:21,0:20:28.90:121,0,29	0/1:14,3:13:53.79:54,0,174
chr10	104952483	.	AT	A	1959.09	PASS	AB=0.787;AC=7;AF=0.140;AN=50;BaseQRankSum=8.403;DP=697;FS=5.844;HRun=9;HaplotypeScore=83.4123;InbreedingCoeff=0.1545;MQ=57.53;MQ0=10;MQRankSum=-1.322;QD=9.33;ReadPosRankSum=-0.241;VQSLOD=2.1885;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,1:49:99:0,129,1429	0/0:15,0:15:42.12:0,42,485	0/1:22,1:13:8.52:9,0,245	0/0:13,0:6:15.04:0,15,164	0/0:25,0:25:75.22:0,75,862	./.	./.	0/1:22,1:17:2.25:61,0,2	0/0:25,0:25:69.19:0,69,787	0/0:45,0:45:99:0,123,1395	0/0:20,0:20:55.41:0,55,627	0/0:23,0:23:63.19:0,63,727	0/0:16,0:16:45.13:0,45,519	0/0:30,1:31:59.76:0,60,921	0/0:41,0:41:99:0,108,1246	0/0:27,0:27:75.22:0,75,866	0/0:31,0:31:81.21:0,81,917	0/0:15,0:15:45.11:0,45,506	0/1:17,9:23:27.39:265,0,27	1/1:11,18:32:0.82:411,1,0	0/1:28,33:58:52.22:770,0,52	0/0:24,0:24:59.79:0,60,692	0/0:24,1:25:42.18:0,42,708	0/0:25,0:25:63.14:0,63,704	./.	0/0:24,0:24:63.19:0,63,727	0/1:17,25:38:62.03:563,0,62	0/0:12,0:12:36.11:0,36,415
chr10	104953948	.	G	GCATCAC	5865.40	PASS	AC=10;AF=0.200;AN=50;BaseQRankSum=0.731;DP=447;FS=22.161;HRun=0;HaplotypeScore=111.8361;InbreedingCoeff=0.9473;MQ=87.74;MQ0=1;MQRankSum=-10.765;QD=77.18;ReadPosRankSum=-0.877;VQSLOD=3.4450;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,2222	0/0:5,0:5:12.04:0,12,265	0/0:26,0:23:44.98:0,45,1051	0/0:35,0:34:82.87:0,83,1755	0/0:25,0:25:69.19:0,69,1583	./.	./.	1/1:4,11:20:54.14:1634,54,0	0/0:8,0:8:24.08:0,24,577	0/0:22,0:22:63.15:0,63,1415	0/0:23,0:23:63.20:0,63,1427	0/0:10,0:10:27.09:0,27,634	0/0:19,0:19:48.15:0,48,1105	0/0:10,0:10:27.09:0,27,619	0/0:15,0:15:36.11:0,36,794	0/0:11,0:11:30.10:0,30,707	0/0:22,0:22:60.19:0,60,1395	0/0:15,0:15:42.13:0,42,962	1/1:6,5:13:33.11:1011,33,0	1/1:0,15:15:42.14:1506,42,0	1/1:4,5:11:15.05:530,15,0	0/0:17,0:17:45.13:0,45,981	0/0:15,0:15:39.12:0,39,890	0/0:21,0:21:57.16:0,57,1230	./.	0/0:32,0:32:96.28:0,96,2062	1/1:0,12:14:32.32:1184,32,0	0/0:1,0:1:3.01:0,3,72
chr10	104955990	.	TG	T	1099.75	PASS	AB=0.905;AC=13;AF=0.260;AN=50;BaseQRankSum=7.978;DP=404;FS=9.763;HRun=10;HaplotypeScore=59.5321;InbreedingCoeff=0.5855;MQ=59.51;MQ0=3;MQRankSum=-2.162;QD=8.87;ReadPosRankSum=0.922;VQSLOD=1.3230;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:33:33.96:0,34,359	0/0:1,0:1:3:0,3,25	0/0:16,0:10:10.32:0,10,140	0/0:11,0:10:11.22:0,11,115	0/0:23,0:23:18.93:0,19,435	./.	./.	1/1:7,8:12:0.42:159,0,0	0/0:15,0:15:30.07:0,30,324	0/0:18,1:19:13.05:0,13,372	0/0:20,0:20:39.09:0,39,421	0/1:9,1:11:7.96:8,0,122	0/0:16,0:16:33.09:0,33,365	0/0:22,0:22:36.02:0,36,364	0/0:11,0:11:24.02:0,24,251	0/0:11,0:11:0.96:0,1,239	0/0:28,1:29:48.10:0,48,518	0/1:13,2:15:1.99:2,0,208	1/1:3,4:6:11.97:99,12,0	1/1:4,16:20:41.98:364,42,0	1/1:8,18:25:8.80:305,9,0	0/0:15,0:15:24.06:0,24,265	0/0:17,0:17:33.08:0,33,357	0/0:11,0:11:27.06:0,27,290	./.	0/1:9,1:11:5.17:5,0,159	1/1:4,15:18:35.99:312,36,0	0/0:9,0:9:20.94:0,21,193
chr10	104957664	.	GAGA	G	3212.38	PASS	AC=10;AF=0.200;AN=50;BaseQRankSum=9.887;DP=551;FS=11.136;HRun=0;HaplotypeScore=92.7772;InbreedingCoeff=0.9963;MQ=66.29;MQ0=5;MQRankSum=-4.262;QD=41.18;ReadPosRankSum=2.356;VQSLOD=4.8941;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,2536	0/0:7,0:7:21.07:0,21,481	0/0:34,0:25:69.29:0,69,1469	0/0:36,0:23:55.11:0,55,1095	0/0:29,0:29:84.29:0,84,1982	./.	./.	1/1:1,10:10:27.09:455,27,0	0/0:21,0:21:60.17:0,60,1313	0/0:39,0:39:99:0,117,2603	0/0:27,0:27:69.24:0,69,1639	0/0:13,0:13:39.13:0,39,888	0/0:24,0:24:68.82:0,69,1533	0/0:19,0:19:57.19:0,57,1339	0/0:22,0:22:57.19:0,57,1334	0/0:17,0:17:51.18:0,51,1253	0/0:37,0:36:86.88:0,87,1930	0/0:18,0:18:51.17:0,51,1081	1/1:0,7:7:18.06:335,18,0	1/1:1,26:26:63.17:1138,63,0	1/1:0,17:17:39.13:727,39,0	0/0:18,0:18:48.14:0,48,1026	0/0:19,0:19:51.18:0,51,1231	0/0:21,0:21:60.21:0,60,1365	./.	0/0:25,0:25:75.26:0,75,1786	1/1:0,16:16:39.13:726,39,0	0/0:8,0:8:24.08:0,24,556
chr10	104957957	.	T	TAA	528.15	PASS	AB=0.692;AC=7;AF=0.146;AN=48;BaseQRankSum=6.491;DP=461;FS=12.514;HRun=0;HaplotypeScore=63.4671;InbreedingCoeff=0.7879;MQ=54.40;MQ0=20;MQRankSum=-4.328;QD=8.13;ReadPosRankSum=-4.077;VQSLOD=1.1150;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:60.20:0,60,964	0/0:6,0:6:18.06:0,18,293	0/0:29,0:11:30.06:0,30,417	0/0:20,0:11:33.11:0,33,517	0/0:35,0:35:99:0,102,1638	./.	./.	1/1:10,12:13:20.08:306,20,0	0/0:14,0:14:39.13:0,39,636	0/0:27,0:27:78.27:0,78,1272	0/0:30,0:30:90.31:0,90,1462	0/0:11,0:10:30.10:0,30,487	0/0:14,0:13:39.12:0,39,612	0/0:17,0:17:48.16:0,48,783	0/0:19,0:19:54.05:0,54,878	0/0:20,0:20:54.18:0,54,881	0/0:20,0:19:54.17:0,54,857	0/0:15,0:15:22.40:0,22,388	0/1:4,4:3:4.71:44,0,5	1/1:2,15:17:21.82:266,22,0	./.	0/0:17,0:17:51.17:0,51,825	0/0:22,0:22:66.21:0,66,1051	0/0:11,0:11:21.07:0,21,338	./.	0/0:28,0:28:81.27:0,81,1300	1/1:2,7:6:0.94:44,1,0	0/0:14,0:14:42.14:0,42,685
chr10	104959714	.	A	AC	4824.13	PASS	AC=10;AF=0.200;AN=50;BaseQRankSum=2.630;DP=590;FS=19.069;HRun=1;HaplotypeScore=76.2135;InbreedingCoeff=0.9894;MQ=71.45;MQ0=0;MQRankSum=-1.381;QD=43.07;ReadPosRankSum=0.707;VQSLOD=2.8445;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1530	0/0:16,0:16:45.14:0,45,614	0/0:24,0:23:59.29:0,59,787	0/0:24,0:23:62.20:0,62,789	0/0:33,0:33:96.31:0,96,1325	./.	./.	1/1:0,21:20:60.18:906,60,0	0/0:24,0:24:72.22:0,72,958	0/0:27,0:27:78.25:0,78,1057	0/0:29,0:29:84.27:0,84,1148	0/0:24,0:24:72.24:0,72,1006	0/0:13,0:13:37.32:0,37,467	0/0:19,0:19:57.19:0,57,797	0/0:21,0:21:63.21:0,63,878	0/0:27,0:27:75.24:0,75,1032	0/0:18,1:19:11.12:0,11,670	0/0:23,1:24:20.37:0,20,789	1/1:1,13:12:33.11:527,33,0	1/1:1,20:21:60.20:948,60,0	1/1:1,20:21:54.18:862,54,0	0/0:32,0:32:96.22:0,96,1298	0/0:19,0:19:57.18:0,57,780	0/0:24,0:24:72.24:0,72,1003	./.	0/0:32,0:32:96.31:0,96,1328	1/1:1,34:35:99:1581,99,0	0/0:9,0:8:24.08:0,24,335
chr10	104961121	.	TC	T	2025.14	PASS	AC=10;AF=0.200;AN=50;BaseQRankSum=12.512;DP=412;FS=7.950;HRun=1;HaplotypeScore=72.4011;InbreedingCoeff=0.9909;MQ=72.37;MQ0=0;MQRankSum=-4.468;QD=21.78;ReadPosRankSum=-0.421;VQSLOD=2.9704;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1534	0/0:5,0:5:15.04:0,15,213	0/0:14,0:14:42.03:0,42,493	0/0:16,0:15:42.10:0,42,578	0/0:17,0:17:51.15:0,51,768	./.	./.	1/1:6,17:22:51:523,51,0	0/0:13,0:13:36.11:0,36,546	0/0:14,0:14:42.06:0,42,572	0/0:13,0:13:38.78:0,39,525	0/0:15,0:15:45.11:0,45,672	0/0:11,0:11:30.06:0,30,442	0/0:15,0:15:42.06:0,42,606	0/0:16,0:16:45.14:0,45,693	0/0:13,0:13:36.09:0,36,538	0/0:22,0:22:56.91:0,57,797	0/0:25,0:25:69.21:0,69,1054	1/1:3,7:10:21.05:222,21,0	1/1:4,9:13:27.07:285,27,0	1/1:4,26:30:69.17:730,69,0	0/0:24,0:24:69.15:0,69,991	0/0:11,0:11:33.07:0,33,494	0/0:17,0:17:51.16:0,51,779	./.	0/0:17,0:17:51.09:0,51,714	1/1:4,13:16:42.08:435,42,0	0/0:5,0:5:15.03:0,15,214
chr10	104961913	.	C	CAT	1292.91	PASS	AC=10;AF=0.200;AN=50;BaseQRankSum=10.107;DP=521;FS=10.031;HRun=0;HaplotypeScore=109.4745;InbreedingCoeff=0.9118;MQ=67.65;MQ0=10;MQRankSum=-1.858;QD=11.97;ReadPosRankSum=-0.742;VQSLOD=2.8320;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:79.87:0,80,906	0/0:5,0:11:9.98:0,10,78	0/0:27,0:18:53.66:0,54,455	0/0:27,0:17:31.04:0,31,319	0/0:15,0:19:47.72:0,48,507	./.	./.	1/1:26,0:22:56.87:486,57,0	0/0:22,0:24:62.62:0,63,674	0/0:23,0:23:58.65:0,59,525	0/0:13,0:14:27.16:0,27,311	0/0:16,0:19:26.03:0,26,446	0/0:10,0:10:10.51:0,11,296	0/0:17,0:20:44.48:0,44,484	0/0:16,0:18:22.71:0,23,397	0/0:10,0:12:30.01:0,30,338	0/0:21,0:25:71.80:0,72,706	0/0:18,0:18:53.70:0,54,536	1/1:4,14:18:31.53:354,32,0	1/1:18,2:20:38.96:325,39,0	1/1:19,1:20:19.51:167,20,0	0/0:16,0:21:2.99:0,3,422	0/0:18,0:20:50.87:0,51,528	0/0:31,0:32:80.08:0,80,852	./.	0/0:30,0:32:94.93:0,95,840	1/1:1,20:22:7.95:125,8,0	0/0:4,0:4:11.99:0,12,119
chr10	104961952	.	GTC	G	1027.50	PASS	AB=1.000;AC=14;AF=0.280;AN=50;BaseQRankSum=5.131;DP=513;FS=1.454;HRun=0;HaplotypeScore=84.3963;InbreedingCoeff=0.5991;MQ=65.41;MQ0=12;MQRankSum=-0.726;QD=6.04;ReadPosRankSum=-3.830;VQSLOD=1.9273;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:77.36:0,77,1216	0/0:7,0:7:12:0,12,109	0/0:54,0:28:57.80:0,58,617	0/0:34,0:20:16.75:0,17,370	0/0:20,0:20:36.54:0,37,569	./.	./.	1/1:19,7:25:68.59:531,69,0	0/1:16,0:16:0.82:1,0,478	0/0:21,0:20:59.51:0,60,659	0/1:16,0:16:8.63:9,0,293	0/0:20,0:19:34.38:0,34,546	0/0:12,0:12:21.06:0,21,412	0/1:20,0:20:28.95:29,0,372	0/0:14,0:14:29.40:0,29,412	0/0:18,0:17:25.91:0,26,482	0/1:18,0:18:10.41:10,0,432	0/0:14,0:14:19.53:0,20,437	1/1:9,0:8:17.80:124,18,0	1/1:13,5:17:7.40:52,7,0	1/1:23,0:21:17.33:132,17,0	0/0:16,0:16:35.99:0,36,450	0/0:20,0:20:38.68:0,39,468	0/0:28,0:28:62.88:0,63,911	./.	0/0:20,0:20:43.83:0,44,539	1/1:24,0:23:42.87:308,43,0	0/0:1,0:1:3.01:0,3,56
chr10	104963287	.	G	GC	4855.91	PASS	AC=10;AF=0.200;AN=50;BaseQRankSum=12.909;DP=491;FS=13.280;HRun=1;HaplotypeScore=71.2108;InbreedingCoeff=0.9978;MQ=65.72;MQ0=1;MQRankSum=-4.299;QD=38.54;ReadPosRankSum=-0.435;VQSLOD=3.8949;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.24:0,87,1084	0/0:11,0:11:30.10:0,30,389	0/0:8,0:8:21.07:0,21,273	0/0:10,0:10:27.03:0,27,296	0/0:20,0:20:51.13:0,51,619	./.	./.	1/1:3,18:18:48.16:703,48,0	0/0:27,0:27:81.26:0,81,1038	0/0:19,0:19:54.18:0,54,701	0/0:15,0:15:39.13:0,39,503	0/0:17,0:16:45.14:0,45,571	0/0:27,0:27:81.26:0,81,1050	0/0:20,0:20:60.15:0,60,744	0/0:25,0:25:75.23:0,75,959	0/0:21,0:21:63.19:0,63,804	0/0:28,0:28:84.27:0,84,1090	0/0:9,0:9:27.09:0,27,348	1/1:0,19:19:57.19:854,57,0	1/1:4,14:18:42.14:616,42,0	1/1:2,50:52:99:2054,138,0	0/0:12,0:12:33.11:0,33,424	0/0:16,0:16:36.12:0,36,466	0/0:25,0:25:75.24:0,75,974	./.	0/0:17,0:17:45.11:0,45,564	1/1:1,15:15:42.14:629,42,0	0/0:8,0:8:24.08:0,24,312
chr10	104963461	.	TAAAA	T	2094.65	PASS	AB=0.971;AC=11;AF=0.220;AN=50;BaseQRankSum=11.277;DP=597;FS=2.961;HRun=13;HaplotypeScore=126.7842;InbreedingCoeff=0.9017;MQ=66.90;MQ0=6;MQRankSum=-5.783;QD=16.11;ReadPosRankSum=0.806;VQSLOD=1.9052;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:40:99:0,107,2166	0/0:1,0:13:35.98:0,36,410	0/0:37,0:24:21.71:0,22,433	0/1:32,0:16:3.49:3,0,345	0/0:40,0:41:99:0,111,2439	./.	./.	1/1:3,17:20:50.50:463,50,0	0/0:19,0:22:51.17:0,51,1146	0/0:30,0:30:72.21:0,72,1373	0/0:29,0:30:78.21:0,78,1592	0/0:25,0:24:63.18:0,63,1324	0/0:16,0:16:39.09:0,39,879	0/0:20,0:22:57.08:0,57,1173	0/0:15,0:16:48.16:0,48,1050	0/0:17,0:18:48.16:0,48,1038	0/0:29,0:29:81.28:0,81,1840	0/0:18,0:21:48.15:0,48,952	1/1:5,20:24:48.01:621,48,0	1/1:7,15:22:47.70:629,48,0	1/1:6,5:7:8.92:106,9,0	0/0:25,0:29:64.19:0,64,1294	0/0:21,0:22:60.17:0,60,1120	0/0:9,0:9:23.86:0,24,408	./.	0/0:29,0:32:84.03:0,84,1415	1/1:4,15:18:30.06:438,30,0	0/0:9,0:10:24.05:0,24,478
chr10	104963470	.	A	AG	194.41	PASS	AB=0.936;AC=6;AF=0.120;AN=50;BaseQRankSum=7.903;DP=597;FS=10.102;HRun=0;HaplotypeScore=96.4992;InbreedingCoeff=0.1369;MQ=66.81;MQ0=7;MQRankSum=-1.138;QD=2.23;ReadPosRankSum=1.450;VQSLOD=2.0351;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,101,1276	0/0:17,0:17:47.67:0,48,352	0/0:39,0:19:23.56:0,24,378	0/0:39,0:18:14.64:0,15,317	0/0:39,0:39:99:0,113,1499	./.	./.	0/1:20,0:20:99:151,0,160	0/0:19,0:19:51.10:0,51,648	0/0:31,0:31:87.18:0,87,1034	0/0:32,0:32:86.49:0,86,1076	0/0:23,0:22:63.17:0,63,804	0/0:19,0:19:53.68:0,54,630	0/0:21,0:21:63.01:0,63,759	0/0:17,0:17:51.04:0,51,647	0/0:19,0:19:54.12:0,54,678	0/0:31,0:30:90.20:0,90,1149	0/0:20,0:20:51.04:0,51,586	0/1:25,0:24:29.78:30,0,120	1/1:15,2:17:2.22:82,2,0	0/1:6,2:5:17.09:37,0,17	0/0:28,0:28:61.16:0,61,792	0/0:25,0:25:73.90:0,74,816	0/0:11,0:11:29.85:0,30,320	./.	0/0:30,0:30:81.19:0,81,946	0/1:16,1:16:9.22:9,0,20	0/0:9,0:9:20.04:0,20,265
chr10	104963767	.	CTATGG	C	2218.47	PASS	AB=0.608;AC=5;AF=0.100;AN=50;BaseQRankSum=9.164;DP=516;FS=36.311;HRun=0;HaplotypeScore=100.2001;InbreedingCoeff=0.3621;MQ=55.64;MQ0=30;MQRankSum=-9.049;QD=28.44;ReadPosRankSum=-0.699;VQSLOD=1.1987;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,138,4367	0/0:10,0:10:30.09:0,30,895	0/0:29,0:12:33.11:0,33,973	0/0:29,0:11:30.10:0,30,906	0/0:22,0:21:66.21:0,66,2022	./.	./.	0/1:8,13:16:8.87:659,0,9	0/0:25,0:25:66.23:0,66,2094	0/0:32,0:31:93.32:0,93,2818	0/0:9,0:9:24.08:0,24,775	0/0:23,0:23:63.22:0,63,2033	0/0:19,0:19:36.12:0,36,1085	0/0:9,0:9:24.08:0,24,736	0/0:29,0:29:81.28:0,81,2550	0/0:13,0:13:36.12:0,36,1116	0/0:16,0:16:48.16:0,48,1551	0/0:17,0:16:48.16:0,48,1551	0/1:6,9:10:99:203,0,132	1/1:3,10:10:18.06:401,18,0	0/0:9,5:13:15.05:0,15,368	0/0:16,0:16:42.14:0,42,1310	0/0:16,0:16:42.14:0,42,1297	0/0:20,0:20:54.19:0,54,1701	./.	0/0:30,0:30:90.31:0,90,2841	0/1:8,21:23:99:1076,0,173	0/0:11,0:11:33.11:0,33,1066
chr10	104963987	.	G	GC	3039.27	PASS	AC=10;AF=0.200;AN=50;BaseQRankSum=11.994;DP=400;FS=5.195;HRun=0;HaplotypeScore=54.6404;InbreedingCoeff=0.9797;MQ=62.87;MQ0=4;MQRankSum=-7.956;QD=38.47;ReadPosRankSum=0.933;VQSLOD=3.6138;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:72.22:0,72,1007	0/0:5,0:5:15.05:0,15,210	0/0:29,0:18:51.17:0,51,707	0/0:29,0:24:62.27:0,62,837	0/0:16,0:16:48.13:0,48,635	./.	./.	1/1:0,18:17:51.17:790,51,0	0/0:16,0:16:45.15:0,45,629	0/0:14,0:14:42.14:0,42,585	0/0:4,0:4:9.03:0,9,126	0/0:17,0:17:45.15:0,45,624	0/0:18,0:18:45.15:0,45,628	0/0:12,0:12:33.11:0,33,460	0/0:12,0:12:36.11:0,36,485	0/0:13,0:13:36.12:0,36,504	0/0:21,0:21:32.31:0,32,730	0/0:18,0:18:51.14:0,51,691	1/1:1,9:9:27.09:431,27,0	1/1:2,11:12:33.10:503,33,0	1/1:0,26:26:66.23:1055,66,0	0/0:11,0:11:33.11:0,33,461	0/0:7,0:7:18.06:0,18,252	0/0:18,0:18:51.17:0,51,713	./.	0/0:18,0:18:54.18:0,54,754	1/1:4,8:10:30.06:430,30,0	0/0:9,0:9:27.09:0,27,378
chr10	104964074	.	TAC	T	288.33	PASS	AB=1.000;AC=11;AF=0.220;AN=50;BaseQRankSum=6.873;DP=228;FS=34.967;HRun=0;HaplotypeScore=45.0978;InbreedingCoeff=0.6865;MQ=75.09;MQ0=0;MQRankSum=-4.171;QD=6.87;ReadPosRankSum=-0.419;VQSLOD=1.2687;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:39.07:0,39,605	0/0:3,0:3:9.03:0,9,173	0/0:8,0:6:17.62:0,18,124	0/1:12,0:8:0.54:1,0,14	0/0:10,0:10:27.08:0,27,470	./.	./.	1/1:9,4:13:19.42:203,19,0	0/0:5,0:5:15.02:0,15,205	0/0:10,0:10:30.05:0,30,422	0/0:6,0:6:2.72:0,3,208	0/0:9,0:9:24.05:0,24,387	0/0:8,0:8:24.05:0,24,367	0/0:5,0:5:12.01:0,12,165	0/0:5,0:5:9.03:0,9,165	0/0:6,0:6:12.04:0,12,231	0/0:30,0:30:87.27:0,87,1584	0/0:28,0:28:69.88:0,70,1411	1/1:4,3:5:9.03:110,9,0	1/1:3,1:4:6.01:66,6,0	1/1:2,1:3:2.98:21,3,0	0/0:4,0:4:9.02:0,9,120	0/0:4,0:4:12.01:0,12,166	0/0:3,0:3:6:0,6,78	./.	0/0:17,0:17:51.12:0,51,771	1/1:1,2:1:3:29,3,0	0/0:8,0:8:24.05:0,24,394
chr10	104964077	.	A	ATGTG	708.95	PASS	AC=8;AF=0.167;AN=48;BaseQRankSum=6.683;DP=213;FS=23.730;HRun=0;HaplotypeScore=52.5640;InbreedingCoeff=0.7419;MQ=70.55;MQ0=0;MQRankSum=-6.678;QD=28.36;ReadPosRankSum=-0.374;VQSLOD=1.4232;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:33.11:0,33,645	0/0:3,0:3:9.03:0,9,180	0/0:7,0:5:14.97:0,15,207	0/0:10,0:6:4.80:0,5,27	0/0:10,0:10:27.09:0,27,527	./.	./.	1/1:5,6:11:33.07:565,33,0	0/0:3,0:3:9.03:0,9,180	0/0:11,0:11:30.10:0,30,532	0/0:6,0:6:15.05:0,15,274	0/0:8,0:8:21.07:0,21,408	0/0:8,0:8:24.07:0,24,433	0/0:4,0:4:9.03:0,9,167	0/0:5,0:5:9.03:0,9,180	0/0:6,0:6:12.04:0,12,240	0/0:30,0:30:90.28:0,90,1745	0/0:27,0:27:81.22:0,81,1504	1/1:5,2:5:11.96:187,12,0	1/1:3,1:4:5.69:77,6,0	./.	0/0:4,0:4:9.03:0,9,157	0/0:4,0:4:12.04:0,12,219	0/0:2,0:2:6.02:0,6,107	./.	0/0:17,0:17:45.15:0,45,857	1/1:3,0:1:2.74:12,3,0	0/0:8,0:8:24.06:0,24,429
chr10	104964120	.	TATATAC	T	752.91	PASS	AC=8;AF=0.200;AN=40;BaseQRankSum=6.639;DP=144;FS=0.973;HRun=0;HaplotypeScore=45.3821;InbreedingCoeff=0.4999;MQ=51.34;MQ0=2;MQRankSum=-6.493;QD=30.12;ReadPosRankSum=-1.028;VQSLOD=2.7988;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:12.02:0,12,282	0/0:4,0:4:9.03:0,9,210	./.	./.	0/0:1,0:1:3:0,3,25	./.	./.	1/1:2,13:14:1.73:415,2,0	0/0:1,0:1:3.01:0,3,105	0/0:5,0:5:15.02:0,15,442	0/0:2,0:2:3:0,3,25	0/0:1,0:1:3.01:0,3,105	0/0:5,0:5:15.02:0,15,354	0/0:2,0:2:6.02:0,6,210	0/0:1,0:1:3.01:0,3,105	0/0:4,0:4:12:0,12,256	0/0:25,0:25:72.18:0,72,2012	0/0:27,0:27:81.12:0,81,2168	1/1:1,5:6:15.05:316,15,0	1/1:0,1:1:3.01:69,3,0	./.	./.	./.	0/0:1,0:1:3.01:0,3,105	./.	0/0:7,0:7:21.06:0,21,531	1/1:2,1:2:3.01:69,3,0	0/0:9,0:9:27.07:0,27,838
chr10	104964529	.	A	ACATG	555.97	PASS	AB=0.947;AC=7;AF=0.140;AN=50;BaseQRankSum=9.141;DP=591;FS=6.990;HRun=0;HaplotypeScore=124.5544;InbreedingCoeff=0.4236;MQ=73.13;MQ0=6;MQRankSum=-9.312;QD=5.10;ReadPosRankSum=-0.318;VQSLOD=1.9770;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,2277	0/0:5,0:5:15.05:0,15,314	0/0:19,0:19:50.62:0,51,669	0/0:23,0:19:38.42:0,38,497	0/0:13,0:13:39.13:0,39,788	./.	./.	0/1:23,3:23:99:230,0,513	0/0:34,0:34:99:0,102,2083	0/0:27,0:27:81.27:0,81,1623	0/0:16,0:16:45.10:0,45,826	0/0:16,0:16:48.16:0,48,1005	0/0:25,0:25:75.22:0,75,1474	0/0:33,0:33:96.33:0,96,1942	0/0:35,0:35:99:0,105,2040	0/0:25,0:25:75.24:0,75,1534	0/0:31,0:31:90.28:0,90,1845	0/0:15,0:15:42.14:0,42,844	0/1:12,0:12:11.70:12,0,302	1/1:16,3:19:18.89:192,19,0	0/1:32,2:33:92.79:146,0,93	0/0:26,0:26:78.25:0,78,1582	0/0:21,0:21:60.21:0,60,1224	0/0:33,0:33:96.33:0,96,2010	./.	0/0:37,0:37:99:0,111,2180	1/1:16,1:15:3.17:104,3,0	0/0:6,0:6:18.06:0,18,377
chr10	104964531	.	A	ATGTGTGTG	3973.08	PASS	AB=1.000;AC=11;AF=0.220;AN=50;BaseQRankSum=1.080;DP=619;FS=1.192;HRun=0;HaplotypeScore=177.7584;InbreedingCoeff=0.8646;MQ=71.73;MQ0=6;MQRankSum=-8.676;QD=26.14;ReadPosRankSum=-2.509;VQSLOD=3.0913;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,2619	0/0:5,0:5:15.05:0,15,403	0/1:18,0:17:21.37:21,0,433	0/0:23,0:18:14.19:0,14,325	0/0:14,0:14:36.11:0,36,911	./.	./.	1/1:29,7:34:21.07:1147,21,0	0/0:33,0:33:96.33:0,96,2568	0/0:29,0:29:81.26:0,81,2046	0/0:16,0:16:45.12:0,45,1063	0/0:16,0:16:48.16:0,48,1282	0/0:25,0:25:69.24:0,69,1845	0/0:34,0:34:87.30:0,87,2326	0/0:35,0:35:93.30:0,93,2434	0/0:24,0:24:72.25:0,72,1933	0/0:32,0:32:90.28:0,90,2357	0/0:15,0:15:42.13:0,42,1053	1/1:7,5:12:15.05:502,15,0	1/1:16,12:26:15.04:537,15,0	1/1:27,7:34:17.93:602,18,0	0/0:27,0:27:78.24:0,78,1917	0/0:22,0:22:60.19:0,60,1546	0/0:33,0:33:96.29:0,96,2516	./.	0/0:36,0:36:93.32:0,93,2491	1/1:9,12:17:30.09:1164,30,0	0/0:6,0:6:18.06:0,18,483
chr10	104964584	.	A	AAGAC	3915.74	PASS	AC=10;AF=0.200;AN=50;BaseQRankSum=1.786;DP=737;FS=14.564;HRun=0;HaplotypeScore=131.1099;InbreedingCoeff=0.9923;MQ=55.92;MQ0=11;MQRankSum=-10.029;QD=31.84;ReadPosRankSum=-6.377;VQSLOD=0.6462;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1899	0/0:14,0:14:39.11:0,39,658	0/0:32,0:21:58.05:0,58,954	0/0:27,0:21:53.26:0,53,949	0/0:25,0:25:75.26:0,75,1354	./.	./.	1/1:10,33:39:81.10:1342,81,0	0/0:46,0:46:99:0,129,2257	0/0:34,0:33:93.32:0,93,1709	0/0:26,0:26:75.25:0,75,1337	0/0:30,0:30:84.27:0,84,1514	0/0:24,0:24:72.21:0,72,1236	0/0:39,0:39:99:0,105,1890	0/0:40,0:40:99:0,114,2084	0/0:29,0:29:78.24:0,78,1350	0/0:35,0:35:99:0,102,1704	0/0:18,0:18:41.97:0,42,741	1/1:5,11:13:35.97:716,36,0	1/1:7,21:27:42.14:915,42,0	1/1:3,7:8:12.02:237,12,0	0/0:31,0:31:44.49:0,44,1275	0/0:36,0:36:99:0,108,1870	0/0:32,0:32:90.30:0,90,1614	./.	0/0:47,0:47:99:0,129,2361	1/1:3,15:12:30.10:706,30,0	0/0:11,0:11:30.10:0,30,531
chr10	104964626	.	A	AG	869.03	PASS	AC=10;AF=0.200;AN=50;BaseQRankSum=7.985;DP=641;FS=2.680;HRun=0;HaplotypeScore=65.3610;InbreedingCoeff=0.9182;MQ=54.96;MQ0=15;MQRankSum=-7.945;QD=11.59;ReadPosRankSum=-3.092;VQSLOD=3.0122;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1474	0/0:14,0:14:42.14:0,42,584	0/0:28,0:2:3.01:0,3,42	0/0:19,0:6:11.90:0,12,148	0/0:24,0:24:72.21:0,72,963	./.	./.	1/1:7,3:6:17.85:141,18,0	0/0:42,0:42:99:0,126,1740	0/0:34,0:33:99:0,99,1367	0/0:25,0:25:75.24:0,75,1019	0/0:28,0:28:84.27:0,84,1156	0/0:32,0:32:96.28:0,96,1300	0/0:26,0:26:72.22:0,72,987	0/0:34,0:34:99:0,102,1358	0/0:20,0:20:60.19:0,60,821	0/0:35,0:35:99:0,105,1447	0/0:24,0:23:66.20:0,66,902	1/1:9,2:6:14.88:129,15,0	1/1:3,16:15:21.05:296,21,0	1/1:0,7:5:6.02:96,6,0	0/0:28,0:28:84.25:0,84,1125	0/0:36,0:36:99:0,108,1442	0/0:35,0:35:99:0,99,1361	./.	0/0:37,0:37:99:0,111,1484	1/1:1,17:10:24.08:369,24,0	0/0:7,0:7:21.07:0,21,293
chr10	104965222	.	GC	G	2266.58	PASS	AB=0.692;AC=5;AF=0.100;AN=50;BaseQRankSum=12.778;DP=678;FS=28.193;HRun=1;HaplotypeScore=124.7673;InbreedingCoeff=-0.1111;MQ=77.36;MQ0=0;MQRankSum=-10.444;QD=10.54;ReadPosRankSum=-1.929;VQSLOD=-0.1137;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1811	0/0:13,0:13:39.13:0,39,623	0/0:32,0:31:93.12:0,93,1389	0/0:24,0:23:49.77:0,50,753	0/0:37,0:37:99:0,111,1747	./.	./.	0/1:37,30:66:99:796,0,1312	0/0:15,0:15:45.14:0,45,694	0/0:32,0:32:96.27:0,96,1429	0/0:33,0:33:99:0,99,1535	0/0:12,0:12:36.12:0,36,575	0/0:23,0:23:69.24:0,69,1100	0/0:18,0:18:54.18:0,54,863	0/0:18,0:18:54.18:0,54,861	0/0:17,0:17:51.15:0,51,769	0/0:32,0:32:96.28:0,96,1456	0/0:32,0:32:96.28:0,96,1482	0/1:27,16:42:99:407,0,932	0/1:24,20:43:99:466,0,618	0/1:11,10:20:99:288,0,220	0/0:18,0:18:54.18:0,54,862	0/0:23,0:23:69.22:0,69,1079	0/0:11,0:11:33.11:0,33,522	./.	0/0:20,0:20:60.20:0,60,959	0/1:21,19:40:99:425,0,754	0/0:14,0:14:42.14:0,42,668
chr10	104965258	.	GGTTTTGTTTTTT	G	3974.16	PASS	AB=0.819;AC=5;AF=0.100;AN=50;BaseQRankSum=8.470;DP=606;FS=4.901;HRun=0;HaplotypeScore=272.9534;InbreedingCoeff=-0.1111;MQ=64.69;MQ0=3;MQRankSum=-9.531;QD=28.39;ReadPosRankSum=-1.842;VQSLOD=2.4954;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,6334	0/0:13,0:13:39.13:0,39,1859	0/0:28,0:18:51.12:0,51,1954	0/0:36,0:28:69.79:0,70,2429	0/0:29,0:29:87.30:0,87,4284	./.	./.	0/1:31,4:29:99:716,0,810	0/0:21,0:21:63.22:0,63,2853	0/0:24,0:24:72.22:0,72,3585	0/0:27,0:27:81.28:0,81,4244	0/0:13,0:13:39.13:0,39,2104	0/0:23,0:23:69.24:0,69,3810	0/0:15,0:15:45.14:0,45,2465	0/0:18,0:18:54.19:0,54,2625	0/0:20,0:20:60.21:0,60,3374	0/0:31,0:31:93.30:0,93,4885	0/0:30,0:30:90.29:0,90,4654	0/1:13,2:15:99:457,0,660	0/1:24,13:38:99:1105,0,1702	0/1:9,4:12:99:349,0,182	0/0:21,0:21:63.21:0,63,3236	0/0:19,0:19:57.19:0,57,2726	0/0:18,0:18:54.17:0,54,3041	./.	0/0:23,0:23:66.22:0,66,2870	0/1:26,9:35:99:1347,0,1069	0/0:13,0:13:39.13:0,39,2034
chr10	104965313	.	GAGTT	G	2403.05	PASS	AB=0.741;AC=4;AF=0.080;AN=50;BaseQRankSum=10.279;DP=592;FS=11.630;HRun=0;HaplotypeScore=156.8921;InbreedingCoeff=-0.0870;MQ=58.95;MQ0=11;MQRankSum=-10.700;QD=14.56;ReadPosRankSum=0.315;VQSLOD=2.6743;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,3225	0/0:11,0:11:33.11:0,33,904	0/0:21,0:14:27.17:0,27,708	0/0:25,0:17:40.68:0,41,968	0/0:20,0:20:60.21:0,60,1641	./.	./.	0/1:33,12:39:99:476,0,1810	0/0:18,0:18:54.19:0,54,1479	0/0:21,0:21:60.21:0,60,1631	0/0:16,0:16:48.16:0,48,1254	0/0:18,0:18:54.19:0,54,1450	0/0:16,0:16:45.15:0,45,1190	0/0:12,0:12:36.12:0,36,986	0/0:17,0:17:51.18:0,51,1394	0/0:20,0:20:60.21:0,60,1602	0/0:29,0:29:87.26:0,87,2308	0/0:24,0:24:69.24:0,69,1860	0/1:18,9:21:99:239,0,930	0/1:27,26:53:99:1210,0,1387	0/0:21,8:24:39.13:0,39,1024	0/0:16,0:16:48.16:0,48,1271	0/0:17,0:17:51.18:0,51,1397	0/0:18,0:18:51.18:0,51,1397	./.	0/0:24,0:24:72.25:0,72,1973	0/1:27,13:39:99:586,0,1893	0/0:14,0:14:42.14:0,42,1066
chr10	104965945	.	CG	C	8256.59	PASS	AC=46;AF=1.000;AN=46;BaseQRankSum=0.333;DP=269;FS=0.000;HRun=1;HaplotypeScore=222.9698;InbreedingCoeff=0.4160;MQ=32.51;MQ0=0;MQRankSum=1.569;QD=30.69;ReadPosRankSum=1.716;VQSLOD=4.3081;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:38.98:475,39,0	1/1:0,6:6:18.06:248,18,0	1/1:1,0:1:0.89:2,1,0	./.	1/1:0,10:10:16.91:218,17,0	./.	./.	1/1:0,16:16:48.16:669,48,0	1/1:0,8:8:24.08:330,24,0	1/1:0,8:8:24.08:334,24,0	1/1:0,12:12:29.95:360,30,0	1/1:0,14:14:33.11:450,33,0	1/1:0,13:13:30.10:410,30,0	1/1:0,18:18:30.10:408,30,0	1/1:0,12:12:30.10:410,30,0	1/1:0,10:10:24.08:328,24,0	1/1:0,12:12:24.55:330,25,0	1/1:0,3:3:9.03:125,9,0	1/1:0,9:9:21.07:290,21,0	1/1:0,26:26:59.84:706,60,0	1/1:0,16:16:35.85:401,36,0	1/1:0,8:8:20.93:240,21,0	1/1:0,5:5:15.05:194,15,0	1/1:0,8:8:8.99:122,9,0	./.	1/1:0,13:13:39.13:542,39,0	1/1:0,23:23:48.16:663,48,0	./.
chr10	104965984	.	AG	A	1834.43	PASS	AB=1.000;AC=37;AF=0.881;AN=42;BaseQRankSum=0.921;DP=229;FS=0.000;HRun=4;HaplotypeScore=262.6289;InbreedingCoeff=0.3180;MQ=33.20;MQ0=0;MQRankSum=0.960;QD=9.50;ReadPosRankSum=2.293;VQSLOD=0.6404;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,4:14:11.25:114,11,0	1/1:6,3:9:9.03:108,9,0	./.	0/1:1,0:1:0:0,0,0	0/0:8,1:9:2.13:0,2,5	./.	./.	0/0:5,0:5:0:0,0,0	1/1:7,2:9:6.02:72,6,0	1/1:5,4:9:12.04:144,12,0	./.	1/1:9,2:11:6.02:72,6,0	1/1:9,2:11:6.02:72,6,0	1/1:10,8:18:24.07:287,24,0	1/1:7,4:11:12.04:143,12,0	1/1:5,5:10:15.05:179,15,0	1/1:6,2:8:6.02:72,6,0	1/1:2,1:3:3.01:36,3,0	1/1:10,0:10:5.88:38,6,0	1/1:22,0:22:10.64:52,11,0	./.	1/1:6,4:10:12.04:143,12,0	./.	1/1:4,3:7:8.06:77,8,0	./.	1/1:6,6:12:18.05:216,18,0	1/1:17,0:17:8.84:55,9,0	1/1:0,1:1:3.01:36,3,0
chr10	104966108	.	CG	C	3855.72	PASS	AB=0.800;AC=39;AF=0.975;AN=40;BaseQRankSum=1.596;DP=120;FS=0.000;HRun=2;HaplotypeScore=125.5112;InbreedingCoeff=-0.0904;MQ=54.10;MQ0=0;MQRankSum=-1.732;QD=32.40;ReadPosRankSum=1.698;VQSLOD=3.2119;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:4:8.99:98,9,0	1/1:0,7:7:18.06:233,18,0	./.	0/1:3,0:4:22.62:32,0,23	1/1:0,10:10:27.09:349,27,0	./.	./.	./.	1/1:0,2:2:3.01:39,3,0	1/1:0,5:5:15.05:194,15,0	1/1:0,8:8:24.08:310,24,0	1/1:0,3:3:6.02:78,6,0	1/1:0,2:2:3.01:39,3,0	1/1:0,1:1:3.01:38,3,0	1/1:0,2:2:3.01:39,3,0	1/1:0,4:4:12.04:155,12,0	1/1:0,1:1:3.01:39,3,0	1/1:0,3:3:9.03:117,9,0	./.	1/1:0,22:22:45.15:582,45,0	./.	1/1:0,13:13:36.12:466,36,0	1/1:0,9:9:27.09:349,27,0	./.	./.	1/1:0,10:10:30.10:388,30,0	1/1:1,3:4:9.03:115,9,0	1/1:0,5:5:15.05:194,15,0
chr10	104966213	.	GGTCCTAGAGAGGCA	G	614.79	PASS	AC=2;AF=0.048;AN=42;BaseQRankSum=3.519;DP=160;FS=21.721;HRun=0;HaplotypeScore=164.3597;InbreedingCoeff=0.6796;MQ=86.65;MQ0=0;MQRankSum=-2.804;QD=55.89;ReadPosRankSum=0.481;VQSLOD=1.9258;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:33.11:0,33,1657	0/0:6,0:6:18.06:0,18,743	0/0:16,0:13:35.99:0,36,696	0/0:11,0:10:30.10:0,30,783	0/0:10,0:10:27.09:0,27,1416	./.	./.	./.	0/0:5,0:5:15.05:0,15,761	0/0:10,0:10:24.08:0,24,1086	0/0:5,0:5:15.05:0,15,719	0/0:11,0:11:33.11:0,33,1669	0/0:2,0:2:6.02:0,6,316	0/0:6,0:6:18.06:0,18,949	0/0:8,0:8:24.08:0,24,1132	0/0:4,0:4:12.04:0,12,633	0/0:5,0:5:15.05:0,15,791	0/0:5,0:5:15.05:0,15,792	./.	1/1:4,7:11:18.06:703,18,0	./.	0/0:5,0:5:15.05:0,15,660	0/0:6,0:6:15.05:0,15,784	0/0:7,0:7:21.07:0,21,888	./.	0/0:15,0:15:42.14:0,42,2078	./.	0/0:1,0:1:3.01:0,3,158
chr10	104966728	.	A	AT	303.40	PASS	AB=0.840;AC=8;AF=0.160;AN=50;BaseQRankSum=5.782;DP=422;FS=21.716;HRun=0;HaplotypeScore=90.4809;InbreedingCoeff=-0.1295;MQ=41.61;MQ0=2;MQRankSum=-4.994;QD=2.17;ReadPosRankSum=4.403;VQSLOD=0.7071;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:17.95:0,18,252	0/1:5,2:7:54.54:55,0,111	0/0:16,0:10:29.69:0,30,386	0/0:15,0:13:42.14:0,42,576	0/0:13,2:15:11.35:0,11,133	./.	./.	0/0:23,0:22:33.09:0,33,443	0/0:19,0:19:17.92:0,18,186	0/1:20,6:25:99:174,0,608	0/0:12,0:12:9.49:0,9,109	0/0:13,0:13:8.99:0,9,126	0/0:11,0:11:11.95:0,12,140	0/0:12,3:14:7.45:0,7,56	0/1:17,0:17:0.04:0,0,1	0/0:17,0:17:17.98:0,18,205	0/1:12,1:13:14.10:14,0,263	0/0:11,0:11:18.06:0,18,252	0/0:17,0:13:21.07:0,21,293	0/1:19,6:22:19.31:19,0,100	0/0:40,0:39:24.92:0,25,320	0/1:9,4:13:28.70:29,0,90	0/0:12,2:14:8.03:0,8,92	0/0:15,0:15:6.02:0,6,84	./.	0/1:9,3:13:99:116,0,323	0/1:22,4:26:20.04:20,0,259	0/0:8,0:9:22.87:0,23,279
chr10	104966924	.	AT	A	3564.22	PASS	AB=0.638;AC=5;AF=0.100;AN=50;BaseQRankSum=13.541;DP=716;FS=3.574;HRun=1;HaplotypeScore=114.0178;InbreedingCoeff=-0.1112;MQ=56.51;MQ0=2;MQRankSum=-2.769;QD=18.18;ReadPosRankSum=-1.280;VQSLOD=3.5507;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1738	0/0:8,0:8:24.07:0,24,350	0/0:21,1:20:60.20:0,60,944	0/0:21,0:18:48.07:0,48,685	0/0:36,0:36:96.31:0,96,1505	./.	./.	0/1:22,24:45:99:825,0,849	0/0:25,0:25:72.25:0,72,1148	0/0:41,0:41:99:0,120,1851	0/0:26,0:26:72.24:0,72,1144	0/0:20,0:20:60.19:0,60,935	0/0:33,0:33:96.31:0,96,1497	0/0:29,0:29:87.28:0,87,1363	0/0:17,0:17:48.16:0,48,764	0/0:26,0:26:75.26:0,75,1195	0/0:21,0:21:60.16:0,60,908	0/0:22,0:22:60.20:0,60,945	0/1:18,27:40:99:850,0,545	0/1:13,18:31:99:623,0,338	0/1:13,20:28:99:612,0,250	0/0:24,0:24:66.18:0,66,991	0/0:27,0:27:75.26:0,75,1193	0/0:29,0:29:84.11:0,84,1278	./.	0/0:34,0:34:99:0,102,1600	0/1:19,22:40:99:655,0,613	0/0:19,0:19:57.10:0,57,789
chr10	104967084	.	GA	G	555.40	PASS	AB=0.777;AC=4;AF=0.080;AN=50;BaseQRankSum=10.018;DP=603;FS=7.807;HRun=8;HaplotypeScore=90.4954;InbreedingCoeff=-0.1027;MQ=57.06;MQ0=4;MQRankSum=-5.388;QD=4.11;ReadPosRankSum=2.211;VQSLOD=0.1646;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:81.19:0,81,938	0/0:15,0:15:42.07:0,42,470	0/0:20,1:13:7.13:0,7,365	0/0:18,0:16:24.85:0,25,483	0/0:26,0:26:69.21:0,69,832	./.	./.	0/0:34,5:37:0.31:0,0,794	0/0:23,0:23:66.18:0,66,775	0/0:39,0:39:99:0,108,1290	0/0:22,0:22:60.18:0,60,725	0/0:15,0:15:42.12:0,42,496	0/0:24,0:24:57.17:0,57,684	0/0:13,0:13:39.12:0,39,471	0/0:28,0:28:78.22:0,78,919	0/0:17,0:17:48.12:0,48,557	0/0:15,0:15:42.13:0,42,507	0/0:23,0:23:69.17:0,69,817	0/1:26,11:31:99:180,0,530	0/1:28,8:36:99:131,0,763	0/1:12,4:15:50.77:51,0,290	0/0:19,0:20:57.04:0,57,667	0/0:24,0:24:67.45:0,67,800	0/0:17,0:17:48.15:0,48,579	./.	0/0:27,0:27:72.15:0,72,850	0/1:27,18:44:99:300,0,654	0/0:7,0:7:21.06:0,21,254
chr10	104967218	.	GAC	G	161.09	PASS	AB=0.931;AC=10;AF=0.200;AN=50;BaseQRankSum=6.858;DP=717;FS=2.128;HRun=0;HaplotypeScore=145.9052;InbreedingCoeff=-0.0559;MQ=54.10;MQ0=21;MQRankSum=-1.085;QD=0.65;ReadPosRankSum=0.833;VQSLOD=2.6362;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:63,4:66:63.54:0,64,1873	0/0:9,0:9:15.02:0,15,211	0/0:60,0:20:21:0,21,255	0/0:53,0:22:11.67:0,12,109	0/0:29,0:29:21.85:0,22,795	./.	./.	0/1:50,0:42:9.52:10,0,97	0/0:16,0:15:12.39:0,12,496	0/1:18,4:22:58.46:58,0,542	0/0:20,2:23:12.57:0,13,606	0/0:21,0:21:12.09:0,12,622	0/0:22,0:22:42.14:0,42,663	0/1:13,2:15:44.16:44,0,297	0/0:20,2:23:15.61:0,16,681	0/0:18,0:18:33.10:0,33,498	0/0:23,1:23:15.60:0,16,661	0/0:18,1:19:3.58:0,4,535	0/1:29,0:25:20.94:21,0,21	0/1:37,0:36:21.04:21,0,30	0/0:38,0:37:9.27:0,9,67	0/0:17,0:17:23.82:0,24,345	0/1:17,1:18:5.71:6,0,394	0/1:26,4:32:61.05:61,0,846	./.	0/0:29,2:31:7.15:0,7,1042	1/1:21,0:21:7.54:27,8,0	0/1:19,3:21:49.43:49,0,668
chr10	104967237	.	ACACAGACC	A	1128.97	PASS	AC=10;AF=0.200;AN=50;BaseQRankSum=7.689;DP=662;FS=13.985;HRun=0;HaplotypeScore=212.1323;InbreedingCoeff=0.9626;MQ=53.60;MQ0=16;MQRankSum=-10.198;QD=7.89;ReadPosRankSum=-3.684;VQSLOD=0.7288;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:70,0:70:99:0,171,5291	0/0:8,0:8:15.05:0,15,602	0/0:51,0:18:39.01:0,39,779	0/0:40,0:18:28.96:0,29,620	0/0:26,0:26:57.54:0,58,2317	./.	./.	1/1:41,1:33:56.41:588,56,0	0/0:16,0:15:11.49:0,11,1252	0/0:23,0:23:66.22:0,66,2086	0/0:24,0:24:54.13:0,54,1845	0/0:20,0:20:54.19:0,54,1956	0/0:19,0:19:51.17:0,51,1922	0/0:16,0:16:38:0,38,1206	0/0:22,0:22:57.17:0,57,1908	0/0:14,0:14:39.12:0,39,1365	0/0:26,0:25:61.34:0,61,2117	0/0:23,0:23:59.84:0,60,1965	1/1:21,1:16:27.12:225,27,0	1/1:28,2:29:22.51:152,23,0	1/1:36,0:35:6.67:117,7,0	0/0:13,0:13:33.09:0,33,989	0/0:16,0:16:45.12:0,45,1287	0/0:34,0:33:89.11:0,89,2872	./.	0/0:34,0:34:99:0,102,3685	1/1:12,1:13:18.51:211,19,0	0/0:23,0:22:63.21:0,63,2339
chr10	104967239	.	ACAGACC	A	2377.49	PASS	AC=10;AF=0.200;AN=50;BaseQRankSum=7.552;DP=649;FS=0.490;HRun=0;HaplotypeScore=181.4855;InbreedingCoeff=0.9855;MQ=53.66;MQ0=14;MQRankSum=-10.655;QD=16.86;ReadPosRankSum=-4.054;VQSLOD=2.4313;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:66:99:0,171,4452	0/0:9,0:9:18.06:0,18,558	0/0:46,0:17:39.01:0,39,693	0/0:39,0:17:27.87:0,28,565	0/0:27,0:27:60.55:0,61,1964	./.	./.	1/1:36,7:34:82.79:1094,83,0	0/0:15,0:14:11.49:0,11,1010	0/0:23,0:23:66.22:0,66,1735	0/0:21,0:21:52.68:0,53,1447	0/0:20,0:20:54.19:0,54,1595	0/0:19,0:19:51.17:0,51,1572	0/0:15,0:15:38.11:0,38,981	0/0:24,0:24:63.20:0,63,1691	0/0:14,0:14:42.10:0,42,1178	0/0:26,0:25:44.13:0,44,1735	0/0:23,0:23:59.71:0,60,1639	1/1:14,6:14:35.98:541,36,0	1/1:21,9:29:27.43:396,27,0	1/1:32,3:34:15.76:156,16,0	0/0:13,0:13:30.04:0,30,814	0/0:16,0:16:45.08:0,45,1018	0/0:34,0:33:84.98:0,85,2337	./.	0/0:35,0:35:99:0,105,3051	1/1:11,2:13:24.05:359,24,0	0/0:22,0:21:63.21:0,63,1875
chr10	104967241	.	AGACC	A	2677.86	PASS	AC=10;AF=0.200;AN=50;BaseQRankSum=7.000;DP=632;FS=0.987;HRun=0;HaplotypeScore=154.7537;InbreedingCoeff=0.9721;MQ=53.98;MQ0=13;MQRankSum=-11.169;QD=19.98;ReadPosRankSum=-4.171;VQSLOD=2.5623;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:64:99:0,173,3777	0/0:7,0:7:18.06:0,18,470	0/0:43,0:18:44.56:0,45,761	0/0:36,0:14:29.60:0,30,532	0/0:28,0:28:63.56:0,64,1695	./.	./.	1/1:36,10:36:97.47:1376,97,0	0/0:14,0:14:14.55:0,15,887	0/0:23,0:23:66.21:0,66,1430	0/0:21,0:21:52.68:0,53,1228	0/0:20,0:20:54.19:0,54,1302	0/0:20,0:20:54.14:0,54,1315	0/0:15,0:15:38.13:0,38,845	0/0:23,0:23:63.20:0,63,1394	0/0:16,0:16:48.12:0,48,1019	0/0:25,0:24:22.81:0,23,1409	0/0:23,0:23:59.71:0,60,1376	1/1:13,4:12:33.11:523,33,0	1/1:17,11:27:27.48:374,27,0	1/1:25,6:30:15.48:219,15,0	0/0:13,0:13:8.02:0,8,639	0/0:15,0:15:44.90:0,45,816	0/0:34,0:33:87.94:0,88,1938	./.	0/0:35,0:35:99:0,105,2597	1/1:10,2:12:24.07:354,24,0	0/0:22,0:21:63.20:0,63,1524
chr10	104967305	.	A	AT	2964.72	PASS	AB=0.665;AC=5;AF=0.100;AN=50;BaseQRankSum=6.897;DP=604;FS=2.661;HRun=1;HaplotypeScore=140.8184;InbreedingCoeff=0.0528;MQ=63.79;MQ0=4;MQRankSum=-5.642;QD=16.29;ReadPosRankSum=-2.987;VQSLOD=2.9334;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,169,2153	0/0:7,0:7:21.05:0,21,258	0/0:15,0:14:36.06:0,36,407	0/0:27,0:26:77.24:0,77,916	0/0:21,0:21:57.19:0,57,740	./.	./.	0/1:41,21:43:1.33:790,0,1	0/0:19,0:19:54.18:0,54,701	0/0:22,0:22:63.20:0,63,808	0/0:15,0:15:45.13:0,45,570	0/0:23,0:22:57.17:0,57,726	0/0:18,0:18:51.17:0,51,662	0/0:24,0:24:66.20:0,66,843	0/0:27,0:27:78.25:0,78,1012	0/0:19,0:19:57.19:0,57,740	0/0:21,0:21:57.17:0,57,725	0/0:16,0:16:45.09:0,45,550	0/1:10,14:23:52.91:592,0,53	0/1:6,9:15:39.58:199,0,40	0/1:23,30:52:99:1025,0,101	0/0:7,0:7:21.07:0,21,272	0/0:12,0:12:36.12:0,36,467	0/0:28,0:28:84.23:0,84,1072	./.	0/0:30,0:30:87.27:0,87,1116	0/1:15,13:28:99:474,0,112	0/0:9,0:9:27.09:0,27,351
chr10	104967443	.	AAC	A	364.62	PASS	AB=0.913;AC=18;AF=0.360;AN=50;BaseQRankSum=3.599;DP=470;FS=13.435;HRun=0;HaplotypeScore=94.8728;InbreedingCoeff=-0.1215;MQ=60.61;MQ0=11;MQRankSum=1.363;QD=1.15;ReadPosRankSum=1.249;VQSLOD=0.9835;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,1:30:10.03:10,0,206	1/1:5,0:11:11.36:56,11,0	0/1:33,0:18:0:0,0,0	0/1:28,0:14:0:0,0,0	0/1:12,3:15:45.47:45,0,139	./.	./.	0/0:29,0:22:8.92:0,9,74	1/1:9,2:12:3.01:33,3,0	0/0:10,0:10:12.04:0,12,160	0/0:12,0:13:18.01:0,18,204	0/0:14,0:13:12.04:0,12,158	0/0:14,0:14:18:0,18,197	0/1:8,0:8:0:0,0,0	0/1:7,1:7:20.49:20,0,122	0/1:8,2:11:50.26:50,0,119	0/1:20,3:22:47.14:47,0,160	0/1:28,2:30:40.88:41,0,370	0/0:17,0:16:15.02:0,15,156	0/1:20,0:19:7.62:8,0,21	0/0:24,0:23:2.99:0,3,23	0/0:16,0:16:9.01:0,9,111	0/1:12,3:15:79.51:80,0,100	0/1:34,2:36:79.09:79,0,355	./.	0/1:21,1:22:8.46:8,0,266	0/0:16,0:17:5.03:0,5,30	0/1:8,4:12:18.94:27,0,19
chr10	104968634	.	T	TCA	493.12	PASS	AB=0.875;AC=3;AF=0.060;AN=50;BaseQRankSum=6.566;DP=668;FS=40.774;HRun=0;HaplotypeScore=109.2130;InbreedingCoeff=-0.0503;MQ=59.00;MQ0=11;MQRankSum=-6.225;QD=5.14;ReadPosRankSum=-0.369;VQSLOD=1.2338;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1863	0/0:10,0:10:30.10:0,30,479	0/0:28,0:13:39.09:0,39,577	0/0:28,0:14:26.68:0,27,400	0/0:25,0:25:60.20:0,60,978	./.	./.	0/1:27,2:22:0.94:1,0,732	0/0:35,0:35:99:0,102,1664	0/0:41,0:41:99:0,123,1980	0/0:20,0:20:38.99:0,39,626	0/0:19,0:19:57.19:0,57,930	0/0:24,0:24:72.22:0,72,1125	0/0:23,0:23:69.24:0,69,1112	0/0:22,0:22:66.23:0,66,1077	0/0:18,0:18:54.17:0,54,842	0/0:36,0:36:99:0,108,1739	0/0:21,0:21:63.22:0,63,1028	0/1:23,2:24:6.24:6,0,902	0/0:27,0:27:78.25:0,78,1246	0/0:36,0:35:96.33:0,96,1566	0/0:19,0:19:45.15:0,45,734	0/0:36,0:36:96.32:0,96,1542	0/0:31,0:31:93.32:0,93,1517	./.	0/0:28,0:28:84.28:0,84,1349	0/1:29,13:42:99:566,0,1017	0/0:5,0:5:15.05:0,15,245
chr10	104968643	.	TGGGAA	T	379.58	PASS	AB=0.815;AC=2;AF=0.040;AN=50;BaseQRankSum=6.607;DP=660;FS=41.943;HRun=0;HaplotypeScore=146.7655;InbreedingCoeff=-0.0423;MQ=59.23;MQ0=8;MQRankSum=-6.118;QD=5.67;ReadPosRankSum=0.789;VQSLOD=0.9271;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.33:0,96,3096	0/0:9,0:9:27.09:0,27,871	0/0:24,0:14:42.14:0,42,1353	0/0:30,0:17:42.14:0,42,1275	0/0:27,0:27:69.24:0,69,2259	./.	./.	0/0:29,0:23:63.21:0,63,1951	0/0:36,0:36:99:0,105,3496	0/0:43,0:43:99:0,129,4196	0/0:20,0:20:39.13:0,39,1259	0/0:21,0:21:63.22:0,63,2091	0/0:23,0:23:69.22:0,69,2222	0/0:22,0:22:63.22:0,63,2035	0/0:21,0:21:63.22:0,63,2076	0/0:15,0:15:45.15:0,45,1448	0/0:35,0:35:99:0,105,3388	0/0:23,0:23:69.24:0,69,2249	0/1:20,2:20:25.18:25,0,1633	0/0:28,0:28:84.29:0,84,2737	0/0:37,0:36:99:0,102,3172	0/0:20,0:20:48.16:0,48,1514	0/0:35,0:35:93.32:0,93,2976	0/0:32,0:32:96.33:0,96,3105	./.	0/0:26,0:26:78.27:0,78,2578	0/1:27,18:45:99:442,0,2422	0/0:5,0:5:15.05:0,15,498
chr10	104968858	.	CCATGAAGGTCTGCCCTGA	C	3693.43	PASS	AB=0.722;AC=7;AF=0.140;AN=50;BaseQRankSum=7.793;DP=588;FS=4.902;HRun=0;HaplotypeScore=297.8196;InbreedingCoeff=0.4869;MQ=63.62;MQ0=15;MQRankSum=-8.119;QD=46.17;ReadPosRankSum=0.666;VQSLOD=1.9349;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,8929	0/0:11,0:11:33.11:0,33,2584	0/0:33,0:12:32.89:0,33,1770	0/0:26,0:20:60.16:0,60,2959	0/0:17,0:17:51.18:0,51,4368	./.	./.	0/1:12,3:5:99:174,0,257	0/0:33,0:33:96.33:0,96,7882	0/0:34,0:34:99:0,99,7424	0/0:15,0:15:45.15:0,45,3488	0/0:35,0:35:99:0,102,8586	0/0:29,0:29:87.30:0,87,7099	0/0:27,0:27:81.28:0,81,6813	0/0:29,0:29:84.29:0,84,6994	0/0:28,0:28:84.29:0,84,6809	0/0:27,0:27:81.28:0,81,6595	0/0:15,0:15:45.15:0,45,3988	0/1:7,7:11:99:1080,0,184	0/1:11,11:19:99:771,0,888	1/1:8,7:13:12.04:408,12,0	0/0:23,0:23:69.24:0,69,5904	0/0:18,0:18:54.19:0,54,4377	0/0:30,0:30:90.31:0,90,7068	./.	0/0:35,0:35:99:0,102,8749	1/1:5,9:12:24.08:1262,24,0	0/0:8,0:8:24.08:0,24,1644
chr10	104968888	.	A	ACG	1357.18	PASS	AB=0.613;AC=9;AF=0.180;AN=50;BaseQRankSum=9.473;DP=625;FS=5.494;HRun=0;HaplotypeScore=114.6936;InbreedingCoeff=0.7988;MQ=62.21;MQ0=5;MQRankSum=-7.547;QD=17.18;ReadPosRankSum=0.308;VQSLOD=3.4089;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,1947	0/0:14,0:14:39.12:0,39,568	0/0:31,0:18:54.13:0,54,754	0/0:36,0:27:63.82:0,64,882	0/0:20,0:20:54.18:0,54,822	./.	./.	1/1:4,9:3:9.03:147,9,0	0/0:30,0:30:84.27:0,84,1263	0/0:34,0:35:99:0,99,1482	0/0:13,0:13:39.11:0,39,556	0/0:40,0:40:99:0,117,1759	0/0:21,0:21:63.20:0,63,942	0/0:29,0:29:87.23:0,87,1280	0/0:30,0:30:87.28:0,87,1311	0/0:30,0:30:90.28:0,90,1336	0/0:27,0:27:81.26:0,81,1216	0/0:17,0:17:49.41:0,49,731	1/1:9,11:16:28.93:472,29,0	0/1:7,12:15:53.52:311,0,54	1/1:5,9:13:3.48:49,3,0	0/0:24,0:24:69.21:0,69,1014	0/0:24,0:24:63.18:0,63,918	0/0:31,0:31:90.29:0,90,1351	./.	0/0:41,0:41:99:0,114,1721	1/1:1,12:12:33.11:527,33,0	0/0:8,0:8:21.07:0,21,321
chr10	104969582	.	C	CTA	2483.89	PASS	AC=10;AF=0.200;AN=50;BaseQRankSum=0.936;DP=388;FS=13.297;HRun=0;HaplotypeScore=68.5161;InbreedingCoeff=0.9710;MQ=64.00;MQ0=12;MQRankSum=-6.889;QD=29.57;ReadPosRankSum=-3.067;VQSLOD=3.1112;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,2:28:72.22:0,72,1008	0/0:5,0:5:12.03:0,12,154	0/0:13,0:10:20.75:0,21,279	0/0:12,0:8:14.88:0,15,159	0/0:19,0:19:36.12:0,36,513	./.	./.	1/1:11,21:22:63.20:1055,63,0	0/0:16,0:16:42.14:0,42,600	0/0:21,0:21:63.21:0,63,887	0/0:18,0:18:45.15:0,45,644	0/0:18,0:18:42.14:0,42,601	0/0:17,0:17:45.12:0,45,606	0/0:15,0:15:39.13:0,39,557	0/0:17,0:17:36.12:0,36,516	0/0:11,0:11:30.10:0,30,420	0/0:26,0:26:70.39:0,70,970	0/0:20,1:20:57.17:0,57,789	1/1:2,12:7:21.07:358,21,0	1/1:0,13:12:27.09:484,27,0	1/1:0,6:6:18.06:323,18,0	0/0:6,0:6:18.05:0,18,240	0/0:9,0:9:18.05:0,18,240	0/0:4,0:4:12.04:0,12,169	./.	0/0:22,0:22:60.20:0,60,859	1/1:1,17:17:24.02:433,24,0	0/0:6,0:6:18.06:0,18,258
chr10	104970113	.	GCAGA	G	347.13	PASS	AC=4;AF=0.095;AN=42;BaseQRankSum=4.255;DP=624;FS=5.075;HRun=0;HaplotypeScore=81.9818;InbreedingCoeff=0.8843;MQ=39.44;MQ0=123;MQRankSum=-2.520;QD=10.21;ReadPosRankSum=1.182;VQSLOD=2.2260;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:72,0:59:81.07:0,81,1518	0/0:10,0:10:24.08:0,24,604	./.	0/0:27,0:4:5.11:0,5,150	0/0:33,0:31:15.04:0,15,349	./.	./.	./.	0/0:18,0:18:48.16:0,48,1178	0/0:37,0:30:87.26:0,87,1819	0/0:21,0:17:18.06:0,18,409	0/0:31,0:30:51.17:0,51,1282	0/0:25,0:25:56.71:0,57,1278	0/0:22,0:22:54.10:0,54,1124	0/0:39,0:39:66.19:0,66,1614	0/0:22,0:21:53.98:0,54,1104	0/0:26,0:21:42.13:0,42,993	0/0:20,0:14:33.11:0,33,799	./.	1/1:2,10:9:9.03:170,9,0	./.	0/0:18,0:16:27.02:0,27,622	0/0:29,0:27:30.08:0,30,634	0/0:29,0:23:33.09:0,33,652	./.	0/0:23,0:20:57.15:0,57,1140	1/1:1,21:12:14.94:284,15,0	0/0:11,0:11:30.10:0,30,745
chr10	104970785	.	GC	G	259.01	PASS	AC=6;AF=0.150;AN=40;BaseQRankSum=4.832;DP=667;FS=25.272;HRun=1;HaplotypeScore=39.2225;InbreedingCoeff=0.7027;MQ=31.76;MQ0=193;MQRankSum=-3.282;QD=9.25;ReadPosRankSum=0.561;VQSLOD=-0.5773;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:39:5.66:0,6,96	0/0:11,0:10:18.06:0,18,287	0/0:28,0:1:3.01:0,3,33	./.	0/0:27,0:20:12.02:0,12,168	./.	./.	./.	0/0:32,0:24:18.06:0,18,288	0/0:30,0:21:63.21:0,63,987	0/0:13,0:10:12.04:0,12,192	0/0:37,0:29:26.86:0,27,384	0/0:30,0:24:36.11:0,36,550	0/0:29,0:23:24.08:0,24,383	0/0:39,0:33:30.09:0,30,454	0/0:33,0:27:21.07:0,21,335	./.	0/0:26,0:13:9.03:0,9,144	1/1:4,3:2:3.01:42,3,0	1/1:3,7:6:12.04:167,12,0	./.	0/0:22,0:17:12.04:0,12,190	0/0:9,0:7:3.01:0,3,48	0/0:55,0:38:21.07:0,21,335	./.	0/0:37,0:25:75.23:0,75,1174	1/1:0,11:6:12.04:166,12,0	./.
chr10	104971884	.	GGCC	G	493.52	PASS	AB=0.708;AC=5;AF=0.100;AN=50;BaseQRankSum=8.366;DP=407;FS=5.993;HRun=0;HaplotypeScore=79.1687;InbreedingCoeff=0.2873;MQ=80.03;MQ0=0;MQRankSum=-6.818;QD=8.66;ReadPosRankSum=-0.662;VQSLOD=2.3394;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,147,3454	0/0:7,0:7:21.07:0,21,428	0/0:17,0:17:51.16:0,51,994	0/0:16,0:16:35.60:0,36,787	0/0:18,0:18:54.18:0,54,1201	./.	./.	0/1:9,8:14:99:158,0,148	0/0:12,0:12:33.11:0,33,814	0/0:12,0:12:36.12:0,36,824	0/0:2,0:2:6.02:0,6,148	0/0:11,0:11:33.10:0,33,764	0/0:15,0:15:45.14:0,45,1004	0/0:15,0:15:45.14:0,45,1029	0/0:18,0:18:54.19:0,54,1269	0/0:15,0:15:45.15:0,45,1096	0/0:34,0:34:96.30:0,96,2257	0/0:23,0:23:66.21:0,66,1465	0/1:6,6:11:55.73:152,0,56	0/0:2,2:2:6:0,6,53	0/1:15,6:21:99:134,0,107	0/0:7,0:7:21.07:0,21,420	0/0:12,0:12:33.11:0,33,753	0/0:31,0:31:90.29:0,90,2100	./.	0/0:22,0:22:66.22:0,66,1538	1/1:0,7:7:17.99:168,18,0	0/0:10,0:10:30.10:0,30,740
chr10	104971888	.	TGC	T	306.07	PASS	AB=0.717;AC=5;AF=0.100;AN=50;BaseQRankSum=7.948;DP=403;FS=4.602;HRun=0;HaplotypeScore=71.1573;InbreedingCoeff=0.2931;MQ=81.72;MQ0=0;MQRankSum=-7.446;QD=5.10;ReadPosRankSum=0.551;VQSLOD=2.3770;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,2755	0/0:5,0:5:15.05:0,15,304	0/0:20,0:20:51.15:0,51,925	0/0:19,0:18:41.99:0,42,629	0/0:17,0:17:48.16:0,48,973	./.	./.	0/1:8,8:13:96.71:97,0,167	0/0:12,0:12:33.11:0,33,670	0/0:13,0:13:39.13:0,39,778	0/0:2,0:2:6.02:0,6,122	0/0:10,0:10:30.10:0,30,608	0/0:13,0:13:39.13:0,39,764	0/0:13,0:13:39.10:0,39,717	0/0:18,0:18:54.17:0,54,1034	0/0:15,0:15:45.13:0,45,841	0/0:32,0:32:93.30:0,93,1834	0/0:21,0:21:60.14:0,60,1122	0/1:8,6:13:84.34:106,0,84	0/0:4,2:4:12:0,12,111	0/1:16,6:22:99:112,0,117	0/0:8,0:8:21.06:0,21,380	0/0:12,0:12:33.10:0,33,598	0/0:30,0:30:87.16:0,87,1523	./.	0/0:19,0:19:57.16:0,57,1003	1/1:1,7:8:14.89:109,15,0	0/0:10,0:10:30.10:0,30,608
chr10	104972241	.	TTG	T	166.91	PASS	AB=0.898;AC=12;AF=0.250;AN=48;BaseQRankSum=5.586;DP=457;FS=6.477;HRun=0;HaplotypeScore=80.0593;InbreedingCoeff=-0.0112;MQ=56.03;MQ0=13;MQRankSum=-0.540;QD=0.89;ReadPosRankSum=-1.176;VQSLOD=0.6257;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:48:56.23:0,56,615	1/1:6,5:11:2.06:58,2,0	./.	0/0:31,0:18:3.01:0,3,41	0/0:8,0:7:9.03:0,9,136	./.	./.	0/0:17,0:12:8.76:0,9,39	0/0:14,0:14:13.74:0,14,235	0/0:21,0:18:22.27:0,22,275	0/0:16,0:16:30.09:0,30,451	0/0:9,0:8:14.94:0,15,187	0/1:18,1:18:12.67:13,0,290	0/0:12,0:12:4.52:0,5,289	0/1:11,3:14:28.20:28,0,303	0/1:13,2:15:7.75:8,0,295	0/1:15,1:22:48.09:48,0,305	0/0:27,0:27:57.36:0,57,774	0/0:10,0:9:5.93:0,6,57	0/1:14,0:11:0:0,0,0	0/0:14,0:11:3:0,3,29	0/1:16,2:18:42.66:43,0,222	0/0:9,0:9:9.01:0,9,115	0/1:34,4:38:76.64:77,0,829	./.	0/1:26,1:26:5.44:5,0,292	1/1:9,0:8:2.84:14,3,0	0/0:7,0:6:6.02:0,6,91
chr10	104977715	.	T	TC	4417.29	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-12.171;DP=704;FS=1.192;HRun=6;HaplotypeScore=68.3625;InbreedingCoeff=0.9864;MQ=68.95;MQ0=2;MQRankSum=-0.577;QD=30.68;ReadPosRankSum=-1.778;VQSLOD=4.7806;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:66:99:0,183,1838	0/0:11,0:11:30.05:0,30,299	0/0:37,0:36:93.15:0,93,922	0/0:23,0:18:35.61:0,36,356	0/0:21,0:21:48.10:0,48,490	0/0:21,0:21:60.14:0,60,612	0/0:24,0:24:63.14:0,63,643	1/1:4,27:31:75.15:873,75,0	0/0:13,0:13:36.08:0,36,367	0/0:34,0:34:93.20:0,93,948	0/0:19,0:19:51.11:0,51,519	0/0:19,0:19:48.11:0,48,489	0/0:22,0:22:57.12:0,57,581	0/0:20,0:20:54.12:0,54,550	0/0:30,0:30:87.20:0,87,887	0/0:23,0:23:63.14:0,63,641	0/0:37,0:37:99:0,105,1071	0/0:25,0:25:60.13:0,60,611	1/1:3,13:14:39.09:470,39,0	1/1:3,28:30:72.19:887,72,0	1/1:5,39:42:99:1433,114,0	0/0:22,0:22:57.12:0,57,581	0/0:25,0:25:66.14:0,66,673	0/0:23,0:23:54.11:0,54,544	0/0:20,0:20:57.13:0,57,581	0/0:22,0:22:63.11:0,63,634	1/1:0,22:22:60.16:754,60,0	0/0:3,0:3:9.02:0,9,92
chr10	104980337	.	CCT	C	492.68	PASS	AB=0.942;AC=14;AF=0.250;AN=56;BaseQRankSum=11.071;DP=594;FS=2.809;HRun=0;HaplotypeScore=81.2899;InbreedingCoeff=0.6390;MQ=63.74;MQ0=1;MQRankSum=-0.419;QD=2.71;ReadPosRankSum=1.081;VQSLOD=1.6034;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,1:41:55.75:0,56,1640	0/0:7,0:7:15.04:0,15,222	0/0:19,0:14:30.04:0,30,398	0/0:26,0:20:39.93:0,40,515	0/1:11,2:13:42.36:42,0,367	0/0:10,0:10:6.01:0,6,66	0/0:21,0:21:16.10:0,16,156	1/1:26,0:26:34.11:181,34,0	0/0:18,0:18:24.65:0,25,614	0/0:24,0:24:63.08:0,63,865	0/0:19,0:19:44.98:0,45,629	0/0:17,0:17:48.13:0,48,706	0/0:25,0:25:66.20:0,66,1016	0/1:24,1:25:0:0,0,746	0/0:20,0:20:60.15:0,60,888	0/0:17,0:17:39.10:0,39,562	0/0:38,0:38:96.29:0,96,1515	0/0:12,1:13:1.36:0,1,515	1/1:12,0:12:16.26:63,16,0	1/1:13,0:11:11.81:49,12,0	1/1:37,0:36:45.14:174,45,0	0/1:15,1:16:1.44:1,0,502	0/0:13,0:13:36.11:0,36,562	0/0:40,3:43:33.10:0,33,1435	0/0:14,0:14:9:0,9,82	0/0:26,0:26:54.18:0,54,863	1/1:25,0:25:38.37:150,38,0	0/1:15,0:15:4.59:5,0,434
chr10	104980338	.	CT	C	2656.51	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=8.951;DP=582;FS=6.064;HRun=1;HaplotypeScore=61.7540;InbreedingCoeff=0.7853;MQ=64.81;MQ0=1;MQRankSum=1.717;QD=20.43;ReadPosRankSum=0.027;VQSLOD=3.4581;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:80.50:0,80,1491	0/0:7,0:7:21.04:0,21,251	0/0:21,0:15:39.03:0,39,449	0/0:27,0:21:56.47:0,56,591	0/0:13,0:13:11.71:0,12,346	0/1:9,0:9:14.87:15,0,36	0/0:19,0:19:20.31:0,20,147	1/1:0,22:22:54.04:616,54,0	0/0:18,0:18:31.49:0,31,600	0/0:24,0:24:72.08:0,72,859	0/0:17,0:17:45.74:0,46,598	0/0:17,0:17:48.11:0,48,615	0/0:25,0:25:75.19:0,75,982	0/0:27,0:27:38.35:0,38,821	0/0:21,0:21:63.16:0,63,829	0/0:16,0:16:48.09:0,48,570	0/0:37,0:37:99:0,111,1481	0/0:13,0:13:28.40:0,28,481	1/1:8,5:13:30.03:354,30,0	1/1:1,11:10:23.89:256,24,0	1/1:1,35:35:68.81:905,69,0	0/0:15,0:15:28.61:0,29,488	0/0:12,0:12:36.11:0,36,495	0/0:42,0:42:96.18:0,96,1379	0/1:13,0:13:14.77:15,0,57	0/0:26,0:26:75.16:0,75,940	1/1:1,24:25:50.55:676,51,0	0/0:14,1:15:31.25:0,31,494
chr10	104982262	.	AG	A	528.69	PASS	AB=0.794;AC=3;AF=0.054;AN=56;BaseQRankSum=8.798;DP=744;FS=1.549;HRun=3;HaplotypeScore=71.5147;InbreedingCoeff=-0.0637;MQ=63.55;MQ0=24;MQRankSum=-7.076;QD=4.13;ReadPosRankSum=-1.639;VQSLOD=-0.1704;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,2026	0/0:9,0:9:24.08:0,24,346	0/0:22,0:9:27.07:0,27,362	0/0:28,0:14:38.81:0,39,511	0/0:28,0:28:81.27:0,81,1165	0/0:26,0:26:69.23:0,69,994	0/0:36,0:36:99:0,102,1469	0/0:43,1:43:99:0,123,1771	0/0:22,0:22:57.15:0,57,798	0/0:25,0:25:75.25:0,75,1074	0/0:13,0:13:39.13:0,39,551	0/0:27,0:27:81.27:0,81,1165	0/0:15,0:15:45.15:0,45,647	0/0:17,0:17:51.17:0,51,734	0/0:31,0:31:90.29:0,90,1278	0/0:25,0:25:75.24:0,75,1063	0/0:34,0:33:99:0,102,1451	0/0:21,0:21:63.21:0,63,906	0/0:28,5:28:3.88:0,4,939	0/1:25,8:33:99:163,0,983	0/1:34,16:48:99:254,0,1090	0/0:16,0:16:48.16:0,48,690	0/0:16,0:16:48.16:0,48,691	0/0:22,0:22:66.22:0,66,950	0/0:27,0:27:81.27:0,81,1166	0/0:26,0:26:75.23:0,75,1060	0/1:35,10:43:99:211,0,1249	0/0:4,0:4:12.04:0,12,173
chr10	104983227	.	TC	T	2477.64	PASS	AB=0.716;AC=5;AF=0.089;AN=56;BaseQRankSum=14.695;DP=884;FS=16.839;HRun=3;HaplotypeScore=89.6576;InbreedingCoeff=-0.0981;MQ=56.34;MQ0=6;MQRankSum=-11.348;QD=9.01;ReadPosRankSum=-1.421;VQSLOD=-0.0928;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,1775	0/0:18,0:18:51.17:0,51,734	0/0:26,0:16:35.43:0,35,574	0/0:34,1:19:31.98:0,32,691	0/0:32,0:32:96.32:0,96,1380	0/0:28,0:28:81.24:0,81,1127	0/0:23,0:23:69.15:0,69,914	0/1:38,14:47:99:242,0,1271	0/0:19,0:19:57.16:0,57,782	0/0:30,0:30:84.27:0,84,1181	0/0:19,0:19:57.19:0,57,820	0/0:25,0:25:72.24:0,72,1033	0/0:27,0:27:81.27:0,81,1158	0/0:29,0:29:81.24:0,81,1127	0/0:21,0:21:60.20:0,60,863	0/0:20,0:20:60.16:0,60,808	0/0:25,0:25:66.21:0,66,933	0/0:42,0:42:99:0,126,1727	0/1:15,14:26:99:394,0,400	0/1:40,30:69:99:764,0,1528	0/1:40,25:63:99:503,0,1395	0/0:29,0:29:84.26:0,84,1171	0/0:23,0:23:69.22:0,69,970	0/0:26,0:26:78.24:0,78,1096	0/0:24,0:24:69.23:0,69,993	0/0:31,0:31:93.31:0,93,1339	0/1:33,26:57:99:692,0,1135	0/0:14,0:14:42.14:0,42,604
chr10	104984678	.	TC	T	2701.70	PASS	AB=0.960;AC=19;AF=0.339;AN=56;BaseQRankSum=4.819;DP=476;FS=5.341;HRun=10;HaplotypeScore=52.3451;InbreedingCoeff=0.7193;MQ=72.13;MQ0=0;MQRankSum=0.643;QD=12.22;ReadPosRankSum=-0.024;VQSLOD=2.8853;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,1:14:1.47:0,1,199	0/0:1,0:1:2.96:0,3,19	0/0:20,0:19:29.51:0,30,247	0/0:12,0:11:19.62:0,20,154	0/0:23,0:23:21.38:0,21,449	1/1:6,13:19:32.99:286,33,0	1/1:4,14:18:38.98:338,39,0	1/1:16,12:28:8.17:208,8,0	0/0:17,0:17:48.13:0,48,531	0/1:17,1:18:1.99:2,0,185	0/1:13,1:14:1.99:2,0,208	0/0:13,0:13:33.52:0,34,342	0/0:14,0:14:24:0,24,243	0/1:18,0:18:6.54:7,0,322	0/0:14,0:14:27.06:0,27,290	0/0:21,1:22:34.10:0,34,597	0/0:25,1:26:37.10:0,37,628	0/0:11,1:12:4.03:0,4,266	1/1:3,17:20:50.81:430,51,0	1/1:2,15:17:35.87:297,36,0	1/1:6,15:21:41.99:364,42,0	0/0:14,0:14:3.56:0,4,241	0/0:10,0:10:24.05:0,24,256	0/0:18,0:18:45.05:0,45,467	1/1:6,13:19:41.99:364,42,0	0/0:14,0:14:30.08:0,30,332	1/1:8,21:29:68.98:598,69,0	0/0:11,0:11:24.05:0,24,257
chr10	104988196	.	G	GC	2886.66	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-9.650;DP=650;FS=0.000;HRun=8;HaplotypeScore=62.2720;InbreedingCoeff=0.9951;MQ=86.11;MQ0=2;MQRankSum=-3.366;QD=24.46;ReadPosRankSum=-2.660;VQSLOD=3.3251;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:77.99:0,78,705	0/0:12,0:12:27.01:0,27,247	0/0:27,0:27:56.36:0,56,498	0/0:23,0:23:47.93:0,48,421	0/0:24,0:24:69.04:0,69,631	0/0:23,0:23:57.02:0,57,521	0/0:22,0:22:51.01:0,51,467	1/1:11,13:20:14.62:400,15,0	0/0:19,0:19:51.01:0,51,461	0/0:23,0:23:57.01:0,57,521	0/0:24,1:25:63.02:0,63,576	0/0:32,0:32:90.02:0,90,813	0/0:22,0:22:66.04:0,66,604	0/0:16,0:16:42.02:0,42,384	0/0:31,0:31:80.99:0,81,730	0/0:18,0:18:51.03:0,51,467	0/0:21,0:21:63:0,63,567	0/0:25,0:25:69.03:0,69,632	1/1:3,16:20:23.66:513,24,0	1/1:2,16:17:39.12:450,39,0	1/1:4,31:35:78.56:992,79,0	0/0:22,0:22:60.02:0,60,544	0/0:27,0:27:75.04:0,75,686	0/0:32,0:32:86.99:0,87,788	0/0:12,0:12:36.01:0,36,325	0/0:25,0:25:63.01:0,63,576	1/1:2,19:21:63.15:706,63,0	0/0:13,0:13:39.02:0,39,357
chr10	104991141	.	C	CT	1083.96	PASS	AB=0.793;AC=10;AF=0.179;AN=56;BaseQRankSum=-2.886;DP=633;FS=5.756;HRun=13;HaplotypeScore=75.7126;InbreedingCoeff=0.6265;MQ=64.50;MQ0=0;MQRankSum=2.027;QD=8.21;ReadPosRankSum=-4.128;VQSLOD=1.7821;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:27:19.55:0,20,280	0/0:10,0:10:17.84:0,18,123	0/0:16,0:15:2.19:0,2,137	0/0:7,0:7:4.55:0,5,69	0/0:27,2:29:10.57:0,11,219	0/0:4,0:27:36.62:0,37,106	0/0:5,0:25:37.56:0,38,121	1/1:11,14:24:23.99:212,24,0	0/0:18,0:20:41.52:0,42,282	0/0:19,0:19:38.59:0,39,267	0/1:12,1:13:10.11:10,0,85	0/0:29,0:29:56.42:0,56,390	0/0:23,0:23:13.96:0,14,204	0/0:29,0:29:43.42:0,43,305	0/0:30,0:30:41.87:0,42,373	0/0:26,0:26:56.47:0,56,390	0/0:21,1:22:25.65:0,26,321	0/0:22,0:22:50.53:0,51,349	1/1:6,11:19:32.69:272,33,0	0/1:11,13:25:35.57:236,0,36	1/1:8,12:20:6.49:198,6,0	0/0:24,0:24:50.33:0,50,349	0/0:31,1:33:27.47:0,27,327	0/0:15,0:17:31.72:0,32,211	0/0:8,0:27:33.49:0,33,109	0/0:29,0:29:56.40:0,56,390	1/1:10,19:29:4.97:311,5,0	0/0:10,0:10:23.73:0,24,164
chr10	104993025	.	GAC	G	989.31	PASS	AB=0.785;AC=14;AF=0.250;AN=56;BaseQRankSum=9.501;DP=584;FS=3.325;HRun=0;HaplotypeScore=72.7890;InbreedingCoeff=0.3845;MQ=52.91;MQ0=32;MQRankSum=-0.218;QD=6.00;ReadPosRankSum=2.268;VQSLOD=2.3728;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:35:32.64:0,33,957	1/1:3,4:6:9.03:110,9,0	0/0:24,0:4:3.01:0,3,44	0/0:26,0:8:3.01:0,3,44	0/0:13,0:12:27.06:0,27,353	0/0:18,0:14:2.84:0,3,14	0/1:37,0:33:0.07:0,0,0	1/1:9,3:4:2.99:24,3,0	0/0:25,0:25:54.17:0,54,815	0/0:17,0:17:48.15:0,48,683	0/0:7,0:5:12.04:0,12,185	0/0:21,0:21:44.68:0,45,704	0/0:26,0:26:66.21:0,66,996	0/0:24,0:23:63.16:0,63,907	0/0:15,1:16:27.09:0,27,412	0/0:22,0:22:35.85:0,36,522	0/0:44,0:44:99:0,105,1589	0/0:43,0:43:94.14:0,94,1417	0/1:4,6:4:5.69:50,0,6	1/1:8,5:13:7.19:167,7,0	0/1:18,13:27:14.45:293,0,14	0/0:8,1:9:15.05:0,15,238	0/0:8,0:8:24.08:0,24,372	0/0:36,3:38:16.46:0,16,1111	1/1:6,8:14:22.10:207,22,0	0/1:10,3:12:49.21:49,0,210	0/1:13,9:16:10.04:229,0,10	0/1:5,1:6:18.65:19,0,192
chr10	104993027	.	C	CAG	1761.08	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=8.827;DP=585;FS=1.252;HRun=0;HaplotypeScore=74.8281;InbreedingCoeff=0.7654;MQ=52.77;MQ0=32;MQRankSum=3.409;QD=15.87;ReadPosRankSum=2.286;VQSLOD=3.7186;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:83.67:0,84,1125	0/1:6,0:5:1.47:1,0,34	0/0:24,0:4:11.88:0,12,111	0/0:26,0:7:18:0,18,191	0/0:13,0:12:33.06:0,33,412	0/1:19,0:15:2.39:2,0,20	0/0:37,0:33:5.65:0,6,50	1/1:12,0:3:6:52,6,0	0/0:24,0:24:62.76:0,63,858	0/0:19,0:19:49.39:0,49,683	0/0:7,0:5:12.04:0,12,182	0/0:20,0:20:54.14:0,54,762	0/0:28,0:28:72.02:0,72,1003	0/0:23,1:23:63.14:0,63,898	0/0:15,0:15:33.08:0,33,458	0/0:23,0:23:54.08:0,54,678	0/0:44,0:44:99:0,123,1726	0/0:43,0:43:99:0,114,1545	1/1:8,2:4:11.71:175,12,0	1/1:8,4:12:30.04:427,30,0	1/1:25,7:28:57.01:755,57,0	0/0:9,0:9:18.05:0,18,252	0/0:8,0:8:24.08:0,24,360	0/0:40,1:40:86.14:0,86,1282	0/0:14,0:14:4.39:0,4,63	0/0:12,0:11:14.66:0,15,247	1/1:13,7:14:36.10:514,36,0	0/0:7,0:7:17.81:0,18,213
chr10	104993040	.	A	ACGCACG	1380.80	PASS	AB=0.842;AC=18;AF=0.321;AN=56;BaseQRankSum=9.818;DP=601;FS=2.926;HRun=0;HaplotypeScore=113.3288;InbreedingCoeff=0.6559;MQ=54.50;MQ0=30;MQRankSum=1.432;QD=6.42;ReadPosRankSum=1.504;VQSLOD=2.3835;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:41.65:0,42,1254	0/1:5,0:5:24.59:25,0,86	0/0:17,0:2:3.01:0,3,44	0/1:23,0:4:12.76:13,0,136	0/0:10,0:9:27.07:0,27,418	1/1:2,17:21:2.98:21,3,0	0/1:2,30:38:0:0,0,0	1/1:8,0:1:2.99:24,3,0	0/0:26,0:26:65.94:0,66,1220	0/0:21,0:21:61.44:0,61,1068	0/0:8,0:7:15.05:0,15,284	0/0:22,0:22:57.15:0,57,1040	0/0:29,0:29:78.19:0,78,1540	0/0:28,0:27:74.81:0,75,1307	0/0:14,0:14:35.94:0,36,615	0/0:18,0:18:44.87:0,45,784	0/0:49,0:49:99:0,129,2278	0/0:41,0:41:99:0,110,2172	1/1:12,0:5:6.85:108,7,0	1/1:12,0:12:18.85:143,19,0	1/1:33,0:27:35.61:449,36,0	0/0:9,0:9:18.06:0,18,354	0/0:8,0:8:24.08:0,24,514	0/0:41,0:40:99:0,108,1876	1/1:16,0:16:28.69:487,29,0	0/1:15,0:14:0.50:1,0,483	1/1:23,0:15:17.16:291,17,0	0/0:10,0:10:30.06:0,30,549
chr10	104993118	.	G	GT	1734.23	PASS	AB=0.714;AC=9;AF=0.161;AN=56;BaseQRankSum=5.540;DP=536;FS=9.182;HRun=4;HaplotypeScore=63.5392;InbreedingCoeff=0.8374;MQ=61.75;MQ0=9;MQRankSum=-2.377;QD=20.89;ReadPosRankSum=0.840;VQSLOD=2.3070;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:78.21:0,78,882	0/0:2,0:2:6.02:0,6,68	0/0:21,0:14:24.38:0,24,310	0/0:26,0:18:38.94:0,39,398	0/0:6,0:6:15.03:0,15,170	0/0:21,0:21:39.11:0,39,442	0/0:30,0:28:69.20:0,69,781	0/1:6,4:9:99:101,0,115	0/0:19,0:19:47.96:0,48,543	0/0:18,0:18:44.82:0,45,510	0/0:12,0:12:29.71:0,30,338	0/0:18,0:18:47.78:0,48,533	0/0:14,0:14:39.11:0,39,442	0/0:22,0:22:53.57:0,54,601	0/0:14,0:14:36.10:0,36,408	0/0:18,0:18:42.12:0,42,476	0/0:44,0:44:99:0,99,1101	0/0:37,0:37:96.27:0,96,1086	1/1:3,9:12:30.10:405,30,0	1/1:10,8:11:21.07:287,21,0	1/1:2,13:14:36.12:492,36,0	0/0:14,0:13:33.09:0,33,374	0/0:7,0:7:21.06:0,21,238	0/0:22,0:22:51.05:0,51,539	0/0:16,0:16:33.09:0,33,374	0/0:19,0:19:51.14:0,51,570	1/1:5,22:21:45.15:614,45,0	0/0:14,0:14:39.10:0,39,433
chr10	104995021	.	CA	C	209.87	PASS	AB=0.961;AC=8;AF=0.143;AN=56;BaseQRankSum=11.692;DP=728;FS=0.000;HRun=4;HaplotypeScore=118.1564;InbreedingCoeff=0.4223;MQ=65.91;MQ0=6;MQRankSum=-4.339;QD=0.95;ReadPosRankSum=-1.329;VQSLOD=-0.7135;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:54.10:0,54,787	0/0:14,0:14:39.13:0,39,544	0/0:42,0:28:20.81:0,21,492	0/0:49,0:25:29.33:0,29,298	0/0:24,0:24:52.79:0,53,776	0/0:22,1:21:31.25:0,31,357	0/1:22,5:24:98.27:98,0,218	1/1:63,0:45:18.29:108,18,0	0/0:16,0:16:47.99:0,48,637	0/0:20,0:20:60.20:0,60,840	0/0:20,0:20:51.14:0,51,714	0/0:25,0:23:69.15:0,69,906	0/0:19,0:19:48.07:0,48,602	0/0:24,0:21:54.14:0,54,725	0/0:21,0:19:51.14:0,51,676	0/0:21,0:20:48.04:0,48,611	0/0:20,0:20:57.15:0,57,767	0/0:26,0:26:69.16:0,69,890	0/1:35,0:26:27.38:27,0,92	0/1:34,0:26:18.54:23,0,19	1/1:24,0:23:13.06:35,13,0	0/0:14,0:14:33.99:0,34,449	0/0:23,0:22:53.92:0,54,706	0/0:22,0:22:57.13:0,57,746	0/0:18,0:18:16.12:0,16,280	0/0:31,0:30:84.28:0,84,1165	0/1:37,0:34:10.18:63,0,10	0/0:9,0:9:27.05:0,27,340
chr10	104995023	.	AAAC	A	1760.41	PASS	AB=0.936;AC=8;AF=0.143;AN=56;BaseQRankSum=8.741;DP=728;FS=12.166;HRun=0;HaplotypeScore=135.1480;InbreedingCoeff=0.7015;MQ=66.12;MQ0=10;MQRankSum=-2.493;QD=9.41;ReadPosRankSum=-2.505;VQSLOD=2.2375;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:63.86:0,64,959	0/0:15,0:15:39.11:0,39,700	0/0:45,0:29:62.24:0,62,741	0/0:48,0:24:17.22:0,17,414	0/0:24,0:24:43.17:0,43,873	0/0:22,0:20:50.51:0,51,384	0/0:28,0:25:59.86:0,60,405	1/1:53,8:42:87.53:788,88,0	0/0:16,0:16:45.07:0,45,805	0/0:20,0:20:60.19:0,60,1137	0/0:19,0:19:51.60:0,52,1002	0/0:28,0:26:66.58:0,67,1249	0/0:19,0:19:43.59:0,44,824	0/0:23,0:20:52.94:0,53,981	0/0:21,0:19:51.14:0,51,869	0/0:21,0:20:49.57:0,50,891	0/0:19,0:19:56.77:0,57,1027	0/0:26,0:26:69.05:0,69,1074	0/1:32,2:25:39.18:243,0,39	1/1:28,4:25:26.79:320,27,0	1/1:18,4:21:29.66:290,30,0	0/0:14,0:14:13.74:0,14,385	0/0:23,0:22:40.91:0,41,851	0/0:24,0:22:59.39:0,59,854	0/0:18,0:18:35.90:0,36,284	0/0:32,0:31:87.23:0,87,1533	0/1:35,3:34:24.27:274,0,24	0/0:11,0:11:29.29:0,29,481
chr10	104995024	.	AAC	A	2927.88	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.460;DP=716;FS=1.310;HRun=0;HaplotypeScore=118.3425;InbreedingCoeff=0.9647;MQ=66.29;MQ0=10;MQRankSum=-5.443;QD=16.45;ReadPosRankSum=-4.101;VQSLOD=2.9705;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:62.39:0,62,775	0/0:17,0:17:22.37:0,22,544	0/0:44,0:28:44.93:0,45,531	0/0:48,0:24:12.59:0,13,292	0/0:24,0:24:29.46:0,29,689	0/0:22,0:20:36.68:0,37,191	0/0:27,0:24:37.65:0,38,168	1/1:27,33:41:99:1110,102,0	0/0:16,0:16:45.06:0,45,667	0/0:20,0:20:60.19:0,60,916	0/0:19,0:19:36.18:0,36,788	0/0:29,0:27:65.91:0,66,979	0/0:18,0:18:44.19:0,44,656	0/0:23,0:20:53.61:0,54,785	0/0:21,0:19:50.91:0,51,682	0/0:20,0:19:49.44:0,49,696	0/0:19,0:19:57.12:0,57,833	0/0:25,0:25:68.84:0,69,855	1/1:25,7:23:5.64:513,6,0	1/1:20,9:23:52.97:589,53,0	1/1:8,12:19:29.95:347,30,0	0/0:14,0:14:24.28:0,24,280	0/0:23,0:22:37.40:0,37,679	0/0:24,0:22:59.38:0,59,710	0/0:18,0:18:31.45:0,31,154	0/0:30,0:29:87.22:0,87,1257	1/1:14,22:33:39.02:538,39,0	0/0:13,0:13:21.81:0,22,413
chr10	104995025	.	AC	A	2414.32	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=12.304;DP=724;FS=3.870;HRun=1;HaplotypeScore=111.8866;InbreedingCoeff=0.7921;MQ=65.26;MQ0=13;MQRankSum=-3.356;QD=10.02;ReadPosRankSum=-2.509;VQSLOD=0.5789;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:13.30:0,13,550	0/0:17,0:17:22.25:0,22,423	0/0:43,1:27:3.73:0,4,355	0/0:46,0:22:18.87:0,19,226	0/0:23,0:23:3.50:0,3,495	0/1:22,0:20:2.34:36,0,2	1/1:24,3:24:36.03:185,36,0	1/1:55,2:40:99:892,102,0	0/0:17,0:17:45.04:0,45,521	0/0:20,0:20:60.07:0,60,717	0/0:19,0:19:35.99:0,36,611	0/0:29,0:27:63.63:0,64,735	0/0:19,0:19:43.59:0,44,506	0/0:25,0:22:56.66:0,57,627	0/0:23,0:21:47.34:0,47,515	0/0:23,0:22:38.21:0,38,524	0/0:21,0:21:42.49:0,42,616	0/0:26,0:26:64.22:0,64,641	1/1:30,1:21:45.17:412,45,0	1/1:29,0:23:55.70:425,56,0	1/1:18,2:19:29.83:229,30,0	0/0:14,0:14:23.42:0,23,169	0/0:23,0:22:9.29:0,9,472	0/0:26,0:23:58.18:0,58,542	0/1:18,0:18:9.62:10,0,14	0/0:30,0:29:86.82:0,87,977	1/1:34,3:33:48.03:413,48,0	0/0:14,0:14:21.71:0,22,343
chr10	104995026	.	CA	C	1069.92	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=8.054;DP=738;FS=22.121;HRun=10;HaplotypeScore=119.0792;InbreedingCoeff=0.7027;MQ=65.96;MQ0=15;MQRankSum=1.949;QD=3.68;ReadPosRankSum=0.544;VQSLOD=0.0732;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,1:23:25.54:0,26,438	0/0:16,0:17:35.88:0,36,359	0/1:45,0:28:17.88:18,0,275	0/0:47,0:23:16.53:0,17,253	0/0:21,0:22:46.78:0,47,445	1/1:6,16:20:22.95:316,23,0	1/1:16,13:26:43.50:394,43,0	1/1:57,0:40:37.95:124,38,0	0/0:18,0:18:36.10:0,36,398	0/0:20,0:21:56.95:0,57,599	0/0:20,0:20:51.99:0,52,553	0/0:29,0:27:66.07:0,66,699	0/0:19,0:19:51.06:0,51,536	0/0:26,0:23:57.07:0,57,599	0/0:22,1:21:18.98:0,19,409	0/0:22,1:22:30.50:0,30,509	0/0:22,0:22:60.20:0,60,613	0/0:25,1:26:28.06:0,28,524	0/1:33,0:21:29.39:29,0,65	1/1:27,0:21:4.86:30,5,0	1/1:21,0:20:13.28:37,13,0	0/0:5,0:16:31.38:0,31,163	0/0:25,0:24:46.09:0,46,478	0/0:24,0:22:47.90:0,48,482	1/1:3,16:19:21.23:249,21,0	0/0:30,0:29:75.04:0,75,810	0/1:38,0:34:10.12:61,0,10	0/0:14,0:14:41.65:0,42,411
chr10	104996202	.	TTA	T	2980.91	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.054;DP=440;FS=7.122;HRun=0;HaplotypeScore=58.1621;InbreedingCoeff=0.8706;MQ=65.79;MQ0=13;MQRankSum=-2.145;QD=25.70;ReadPosRankSum=-1.177;VQSLOD=3.6069;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.14:0,42,701	0/0:3,0:3:6.02:0,6,102	0/0:14,0:11:13.55:0,14,134	0/0:24,0:13:16.53:0,17,184	0/0:24,0:24:60.21:0,60,1015	0/0:14,0:14:33.11:0,33,561	0/0:6,0:6:12.04:0,12,204	1/1:11,32:42:98.94:1217,99,0	0/0:20,0:20:45.15:0,45,764	0/0:14,0:14:39.13:0,39,653	0/0:17,0:17:36.12:0,36,612	0/0:16,0:15:39.13:0,39,662	0/0:13,0:13:36.12:0,36,611	0/0:13,0:12:21.05:0,21,330	0/0:10,0:10:18.06:0,18,306	0/0:11,0:11:24.08:0,24,392	0/0:25,0:25:66.23:0,66,1122	0/0:18,0:18:48.16:0,48,801	1/1:5,14:18:39.13:507,39,0	1/1:2,26:25:66.21:858,66,0	1/1:2,3:4:9.03:117,9,0	0/0:3,0:2:3.01:0,3,51	0/0:5,0:4:9.03:0,9,153	0/0:4,0:4:6.02:0,6,101	0/0:20,0:19:45.15:0,45,749	0/0:25,0:25:66.23:0,66,1123	1/1:6,15:16:38.46:451,38,0	0/0:9,0:9:15.05:0,15,255
chr10	104996372	.	C	CT	364.84	PASS	AC=6;AF=0.150;AN=40;BaseQRankSum=-1.534;DP=317;FS=0.000;HRun=0;HaplotypeScore=16.7680;InbreedingCoeff=0.4287;MQ=32.43;MQ0=172;MQRankSum=-1.328;QD=11.06;ReadPosRankSum=-0.298;VQSLOD=3.2707;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:5,0:1:3.01:0,3,42	0/0:6,0:2:3:0,3,27	0/0:6,0:1:3.01:0,3,42	0/0:29,0:21:6.02:0,6,77	0/0:9,0:3:9.03:0,9,126	./.	./.	0/0:19,0:9:3.01:0,3,42	0/0:19,0:9:27.09:0,27,377	0/0:23,0:21:18.06:0,18,245	0/0:12,0:7:3.01:0,3,42	./.	./.	0/0:9,0:3:6.02:0,6,79	0/0:8,0:3:6.02:0,6,84	./.	0/0:17,0:2:3.01:0,3,42	1/1:0,4:1:3.01:48,3,0	1/1:1,15:7:15.05:239,15,0	./.	./.	0/0:5,0:3:3.01:0,3,42	0/0:14,0:1:3.01:0,3,42	0/0:14,0:13:27.09:0,27,370	0/0:17,0:5:15.05:0,15,210	1/1:1,12:4:12.04:191,12,0	0/0:9,0:5:6.02:0,6,84
chr10	104997034	.	C	CCTTT	3424.77	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-7.148;DP=644;FS=8.724;HRun=0;HaplotypeScore=91.5753;InbreedingCoeff=0.8847;MQ=50.65;MQ0=6;MQRankSum=0.991;QD=28.30;ReadPosRankSum=-2.111;VQSLOD=2.2269;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:84.10:0,84,1314	0/0:14,0:14:33.08:0,33,512	0/0:17,0:3:5.96:0,6,48	0/0:20,0:10:12.03:0,12,194	0/0:36,0:37:75.12:0,75,1140	0/0:18,0:18:36.09:0,36,539	0/0:14,0:14:33.10:0,33,505	0/1:26,0:20:1.90:277,0,2	0/0:8,0:8:24.07:0,24,369	0/0:23,0:23:57.17:0,57,866	0/0:31,0:31:63.15:0,63,997	0/0:19,0:19:45.15:0,45,713	0/0:17,0:17:42.11:0,42,612	0/0:15,0:15:30.10:0,30,490	0/0:29,0:29:69.21:0,69,1082	0/0:24,0:24:57.19:0,57,933	0/0:26,0:25:50.83:0,51,710	0/0:26,0:23:35.16:0,35,805	1/1:7,12:17:36.11:822,36,0	1/1:9,21:30:39.13:927,39,0	1/1:3,7:10:18.06:424,18,0	0/0:26,0:26:57.06:0,57,901	0/0:37,0:37:90.22:0,90,1405	0/0:21,0:21:28.08:0,28,627	0/0:24,0:24:51.12:0,51,752	0/0:29,0:29:72.24:0,72,1156	1/1:5,30:35:42.14:976,42,0	0/0:6,0:6:15.05:0,15,246
chr10	104997743	.	AC	A	83.73	PASS	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.226;DP=709;FS=5.165;HRun=1;HaplotypeScore=45.7902;InbreedingCoeff=0.5820;MQ=43.63;MQ0=318;MQRankSum=-3.410;QD=6.44;ReadPosRankSum=-0.080;VQSLOD=0.5286;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:27:30.10:0,30,479	0/0:13,0:5:3.01:0,3,48	0/0:30,0:4:9.46:0,9,76	0/0:34,0:11:27.42:0,27,221	0/0:32,0:10:15.05:0,15,239	./.	./.	1/1:1,12:4:12.04:168,12,0	0/0:30,0:21:33.11:0,33,526	0/0:34,0:14:45.15:0,45,719	0/0:28,0:12:15.05:0,15,239	0/0:33,0:24:21.07:0,21,334	0/0:34,0:23:23.81:0,24,371	0/0:28,0:18:9.03:0,9,143	0/0:38,0:26:15.05:0,15,239	0/0:25,0:15:11.82:0,12,191	0/0:32,0:15:27.09:0,27,431	0/0:24,0:12:21.07:0,21,335	./.	./.	./.	0/0:35,0:20:12.04:0,12,191	0/0:17,0:6:3.01:0,3,48	0/0:39,0:23:21.07:0,21,335	./.	0/0:26,0:17:51.16:0,51,792	./.	0/0:20,0:9:21.01:0,21,261
chr10	104999887	.	GT	G	4077.63	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=5.361;DP=693;FS=2.422;HRun=10;HaplotypeScore=74.5803;InbreedingCoeff=0.9178;MQ=59.67;MQ0=11;MQRankSum=-3.346;QD=16.85;ReadPosRankSum=2.311;VQSLOD=4.4565;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,1:20:21.96:0,22,453	0/0:11,0:11:24.55:0,25,271	0/1:33,0:18:3.73:4,0,232	0/0:29,0:16:4.84:0,5,205	0/0:40,0:40:99:0,108,1192	1/1:4,20:23:53.99:468,54,0	1/1:4,19:22:53.98:469,54,0	1/1:5,20:22:53.94:462,54,0	0/0:21,0:20:48.13:0,48,530	0/0:29,0:30:81.01:0,81,863	0/0:20,0:20:43.67:0,44,468	0/0:21,0:21:27.26:0,27,501	0/0:26,0:26:60.12:0,60,650	0/0:23,0:23:54.06:0,54,580	0/0:27,0:27:72.19:0,72,795	0/0:24,0:24:60.16:0,60,664	0/0:27,0:27:60.16:0,60,658	0/0:26,2:28:26.10:0,26,743	1/1:7,22:27:65.97:573,66,0	1/1:5,24:29:68.97:599,69,0	1/1:1,23:24:56.98:495,57,0	0/0:22,0:21:42.11:0,42,465	0/0:21,0:21:50.79:0,51,564	0/0:17,0:17:42.11:0,42,460	1/1:7,24:31:35.82:540,36,0	0/0:34,0:34:82.74:0,83,880	1/1:1,23:21:53.99:469,54,0	0/0:10,0:10:21.06:0,21,232
chr10	105000420	.	AC	A	588.45	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=1.725;DP=627;FS=0.000;HRun=2;HaplotypeScore=68.4003;InbreedingCoeff=0.9112;MQ=44.18;MQ0=93;MQRankSum=-0.062;QD=13.37;ReadPosRankSum=-3.300;VQSLOD=1.4325;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:52:99:0,123,1742	0/0:11,0:5:9.03:0,9,135	0/0:12,1:3:5.89:0,6,37	0/0:12,0:4:8.99:0,9,110	0/0:24,0:15:33.11:0,33,493	0/0:26,0:26:60.16:0,60,873	0/0:26,0:20:51.13:0,51,739	./.	0/0:24,0:24:54.05:0,54,734	0/0:28,0:22:66.22:0,66,985	0/0:21,0:17:45.15:0,45,673	0/0:23,0:23:38.84:0,39,583	0/0:27,0:26:51.13:0,51,739	0/0:29,0:29:48.16:0,48,719	0/0:36,0:36:69.15:0,69,982	0/0:11,0:11:18.06:0,18,270	0/0:47,0:42:99:0,108,1568	0/0:26,0:20:54.17:0,54,789	1/1:0,7:5:15.05:194,15,0	1/1:1,10:8:12.04:156,12,0	1/1:0,9:6:18.06:234,18,0	0/0:22,0:19:48.16:0,48,714	0/0:18,0:14:33.11:0,33,494	0/0:33,0:27:63.21:0,63,943	0/0:14,0:8:18.06:0,18,269	0/0:34,0:28:75.25:0,75,1118	1/1:0,17:5:12.04:156,12,0	0/0:18,0:13:39.13:0,39,584
chr10	105001550	.	TCA	T	269.40	PASS	AB=0.896;AC=12;AF=0.231;AN=52;BaseQRankSum=2.988;DP=684;FS=3.136;HRun=0;HaplotypeScore=69.5671;InbreedingCoeff=-0.0610;MQ=44.75;MQ0=155;MQRankSum=1.405;QD=1.07;ReadPosRankSum=0.331;VQSLOD=1.3931;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:22:21.02:0,21,221	0/0:9,0:5:3:0,3,27	./.	0/0:46,0:4:0.47:0,0,1	0/1:13,1:11:18.11:18,0,155	0/0:16,0:12:15.03:0,15,204	0/1:35,5:26:57.34:57,0,446	0/0:28,0:6:3.01:0,3,44	0/1:23,3:22:3.07:3,0,376	0/1:19,2:16:0.09:0,0,375	0/1:11,3:12:18.11:18,0,165	0/0:35,0:30:42.13:0,42,612	0/1:28,3:29:27.20:27,0,441	0/0:26,3:25:30.10:0,30,450	0/0:39,3:36:15:0,15,642	0/1:28,2:22:12.16:12,0,228	0/1:22,3:23:51.38:51,0,512	0/1:13,4:16:45.28:45,0,183	./.	1/1:7,6:10:15.04:166,15,0	0/0:17,0:25:30.03:0,30,315	0/0:14,0:10:18.06:0,18,271	0/0:9,0:6:12.04:0,12,181	0/0:37,2:31:45.15:0,45,674	0/1:19,1:17:9.68:10,0,415	0/0:17,0:11:15:0,15,159	0/0:6,0:11:12.01:0,12,139	0/0:9,0:8:18.06:0,18,271
chr10	105010591	.	TAC	T	300.17	PASS	AB=0.952;AC=18;AF=0.391;AN=46;BaseQRankSum=2.393;DP=695;FS=10.097;HRun=0;HaplotypeScore=75.9427;InbreedingCoeff=-0.2059;MQ=34.62;MQ0=222;MQRankSum=0.694;QD=0.76;ReadPosRankSum=-0.694;VQSLOD=0.0430;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:23:15.05:0,15,221	./.	./.	./.	0/0:24,0:19:11.83:0,12,178	1/1:14,0:8:2.50:9,2,0	1/1:28,0:9:2.97:11,3,0	./.	0/1:28,2:20:43:43,0,164	0/1:27,0:21:33.66:55,0,34	1/1:13,10:20:8.86:97,9,0	0/1:34,0:24:17.90:18,0,480	0/1:18,0:13:17.59:18,0,147	0/0:18,0:21:32.39:0,32,297	0/1:34,1:27:14.68:15,0,205	0/1:27,2:20:16.45:16,0,157	0/0:23,0:17:27.09:0,27,402	0/0:15,0:11:6.02:0,6,89	0/0:6,0:4:9:0,9,111	0/0:18,0:14:14.88:0,15,219	0/1:32,2:19:8.68:9,0,266	0/1:29,3:31:54.93:55,0,214	0/1:23,2:24:17.69:18,0,159	0/1:33,2:23:38.15:38,0,234	./.	0/1:19,1:16:23.71:24,0,58	0/0:26,1:12:16.98:0,17,226	0/1:7,0:8:20.68:21,0,122
chr10	105010758	.	TGAATGAATGA	T	202.58	PASS	AB=0.682;AC=1;AF=0.019;AN=52;BaseQRankSum=3.842;DP=633;FS=1.667;HRun=0;HaplotypeScore=161.6722;InbreedingCoeff=-0.0348;MQ=46.79;MQ0=44;MQRankSum=-2.101;QD=13.51;ReadPosRankSum=0.746;VQSLOD=2.7187;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.23:0,69,2178	0/0:7,0:5:15.05:0,15,237	0/0:30,0:7:5.72:0,6,237	0/0:24,0:3:8.06:0,8,94	0/0:33,0:32:84.29:0,84,3062	0/0:9,0:9:21.07:0,21,384	0/0:10,0:9:27.07:0,27,481	./.	0/0:32,0:32:96.33:0,96,3683	0/0:53,0:53:99:0,160,6638	0/0:29,0:29:81.28:0,81,3035	0/0:29,0:29:84.29:0,84,3717	0/0:27,0:27:67.95:0,68,2581	0/0:22,0:22:66.22:0,66,2193	0/0:25,0:25:72.25:0,72,2913	0/0:26,0:26:78.27:0,78,3070	0/0:24,0:23:63.22:0,63,3080	0/0:28,0:28:84.27:0,84,3625	./.	0/0:9,3:5:3.01:0,3,31	0/0:17,0:7:12:0,12,470	0/0:27,0:26:78.27:0,78,3540	0/0:21,0:21:51.17:0,51,1909	0/0:24,0:24:66.22:0,66,2401	0/0:22,0:14:39.12:0,39,570	0/0:28,0:28:81.28:0,81,3829	0/1:8,7:5:80.75:277,0,81	0/0:18,0:17:51.17:0,51,1920
chr10	105012299	.	TTC	T	3472.35	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.299;DP=573;FS=0.434;HRun=0;HaplotypeScore=70.9638;InbreedingCoeff=0.9947;MQ=59.86;MQ0=4;MQRankSum=-4.079;QD=34.04;ReadPosRankSum=1.810;VQSLOD=5.6786;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:71.60:0,72,1039	0/0:6,0:6:18.05:0,18,279	0/0:19,0:15:34.66:0,35,389	0/0:9,0:8:17.92:0,18,235	0/0:25,0:25:66.10:0,66,1029	0/0:24,0:24:66.14:0,66,937	0/0:23,0:22:66.08:0,66,878	1/1:2,21:22:41.73:844,42,0	0/0:15,0:15:44.99:0,45,674	0/0:35,0:34:99:0,99,1485	0/0:10,0:10:27.04:0,27,382	0/0:23,0:23:59.98:0,60,849	0/0:21,0:21:54.10:0,54,721	0/0:17,0:17:51.05:0,51,758	0/0:26,0:26:75.04:0,75,1044	0/0:18,0:18:43.95:0,44,660	0/0:33,0:33:96.22:0,96,1449	0/0:17,0:17:48.10:0,48,720	1/1:1,7:7:21.05:284,21,0	1/1:1,21:22:45.08:633,45,0	1/1:1,13:14:30.07:432,30,0	0/0:20,0:20:57.03:0,57,847	0/0:26,0:26:78.22:0,78,1200	0/0:10,0:10:30.09:0,30,478	0/0:30,0:30:90.21:0,90,1338	0/0:23,0:23:69.17:0,69,1020	1/1:7,28:34:90.25:1278,90,0	0/0:15,0:14:42.14:0,42,699
chr10	105013031	.	C	CAGATAT	1668.27	PASS	AB=0.607;AC=9;AF=0.161;AN=56;BaseQRankSum=6.392;DP=680;FS=0.773;HRun=0;HaplotypeScore=130.1717;InbreedingCoeff=0.8539;MQ=55.77;MQ0=25;MQRankSum=-6.500;QD=13.56;ReadPosRankSum=-2.645;VQSLOD=2.4997;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:71.24:0,71,1316	0/0:11,0:11:24.06:0,24,429	0/0:11,0:2:3.01:0,3,58	0/0:25,0:7:14.98:0,15,238	0/0:27,0:27:54.14:0,54,999	0/0:21,0:21:51.16:0,51,1019	0/0:29,0:29:42.13:0,42,813	1/1:30,0:22:24.04:376,24,0	0/0:29,0:29:45.14:0,45,906	0/0:33,0:32:71.98:0,72,1422	0/0:21,0:20:45.10:0,45,837	0/0:26,0:26:63.18:0,63,1168	0/0:31,0:31:72.25:0,72,1475	0/0:24,0:24:51.18:0,51,1056	0/0:32,0:32:63.20:0,63,1234	0/0:17,0:17:39.10:0,39,696	0/0:29,0:29:54.12:0,54,1025	0/0:14,0:13:24.07:0,24,463	1/1:12,8:17:30.09:813,30,0	1/1:9,12:16:3.01:54,3,0	0/1:6,10:17:0:0,0,0	0/0:26,0:26:54.19:0,54,1080	0/0:22,0:22:51.16:0,51,992	0/0:23,0:23:51.16:0,51,993	0/0:33,0:33:69.18:0,69,1345	0/0:29,0:29:60.19:0,60,1187	1/1:15,17:30:21.02:574,21,0	0/0:6,0:5:12.04:0,12,252
chr10	105013672	.	C	CGT	256.50	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=-0.671;DP=628;FS=6.042;HRun=0;HaplotypeScore=74.2973;InbreedingCoeff=0.9006;MQ=56.03;MQ0=17;MQRankSum=-4.819;QD=6.58;ReadPosRankSum=-0.922;VQSLOD=2.0894;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,144,2049	0/0:8,0:8:24.08:0,24,334	0/0:28,0:23:63.17:0,63,855	0/0:27,0:21:57.11:0,57,741	0/0:24,0:24:66.21:0,66,921	0/0:17,0:17:45.09:0,45,602	0/0:19,0:19:54.10:0,54,711	1/1:7,10:10:12.03:191,12,0	0/0:27,0:27:78.21:0,78,1061	0/0:24,0:24:57.17:0,57,796	0/0:25,0:25:66.21:0,66,926	0/0:28,0:28:75.24:0,75,1046	0/0:32,0:32:93.29:0,93,1298	0/0:25,0:25:75.21:0,75,1050	0/0:25,0:25:66.16:0,66,902	0/0:27,0:27:72.23:0,72,1010	0/0:26,0:26:75.22:0,75,1045	0/0:20,0:20:60.14:0,60,813	./.	./.	1/1:2,5:4:3.01:55,3,0	0/0:31,0:31:81.23:0,81,1136	0/0:21,0:21:60.20:0,60,857	0/0:29,0:29:78.15:0,78,1042	0/0:20,0:20:57.14:0,57,771	0/0:24,0:24:69.19:0,69,962	1/1:3,12:7:9.87:131,10,0	0/0:11,0:11:30.10:0,30,429
chr10	105014778	.	G	GA	179.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.728;DP=765;FS=6.639;HRun=1;HaplotypeScore=71.3464;InbreedingCoeff=0.9871;MQ=58.71;MQ0=18;MQRankSum=0.587;QD=19.89;ReadPosRankSum=0.610;VQSLOD=3.5291;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,1674	1/1:0,9:8:18.06:270,18,0	0/0:32,0:16:33.04:0,33,394	0/0:22,0:9:21.03:0,21,254	0/0:21,0:21:60.19:0,60,776	0/0:26,0:26:57.17:0,57,725	0/0:27,0:27:81.25:0,81,1034	0/0:36,1:37:99:0,105,1334	0/0:25,0:25:69.22:0,69,894	0/0:34,0:34:99:0,102,1323	0/0:16,0:16:45.15:0,45,582	0/0:31,0:31:87.27:0,87,1111	0/0:34,0:34:90.25:0,90,1136	0/0:31,0:31:87.28:0,87,1129	0/0:38,0:38:99:0,105,1362	0/0:38,0:38:99:0,108,1372	0/0:42,0:42:99:0,123,1594	0/0:19,0:19:54.18:0,54,700	0/0:19,0:15:39.11:0,39,477	0/0:10,0:10:30.08:0,30,374	0/0:43,0:43:99:0,123,1567	0/0:20,0:20:54.16:0,54,669	0/0:16,0:16:48.13:0,48,600	0/0:28,0:28:84.27:0,84,1085	0/0:28,2:28:81.26:0,81,1051	0/0:33,0:33:96.30:0,96,1232	0/0:23,0:23:69.21:0,69,875	0/0:17,0:17:51.17:0,51,658
chr10	105015353	.	AGTGTGTGTGT	A	121.13	PASS	AB=0.982;AC=8;AF=0.154;AN=52;BaseQRankSum=3.380;DP=556;FS=4.575;HRun=0;HaplotypeScore=149.3029;InbreedingCoeff=0.2115;MQ=62.13;MQ0=19;MQRankSum=-0.414;QD=1.01;ReadPosRankSum=-0.972;VQSLOD=2.5956;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:14.73:15,0,167	1/1:5,0:10:1.16:3,1,0	./.	./.	0/0:16,0:17:21.04:0,21,439	1/1:10,6:17:3.01:89,3,0	0/0:15,11:26:8.75:0,9,46	0/0:20,0:20:0.89:0,1,2	0/0:16,0:14:21.05:0,21,506	0/0:23,0:22:28.01:0,28,556	0/0:15,0:15:9.03:0,9,305	0/0:23,0:22:27.49:0,27,773	0/0:24,0:24:37.01:0,37,1028	0/0:22,0:22:26.96:0,27,676	0/0:17,0:21:14.91:0,15,272	0/0:20,0:18:33.11:0,33,1209	0/0:18,0:22:27.01:0,27,439	0/0:13,0:11:15:0,15,275	0/0:18,0:16:7.22:0,7,48	0/0:10,0:9:5.99:0,6,49	0/1:41,0:39:9.21:9,0,64	0/0:14,0:15:24.08:0,24,746	0/0:15,0:14:18.06:0,18,403	0/0:31,0:30:42.13:0,42,1416	0/1:10,0:9:5.82:6,0,19	0/0:22,0:21:33.98:0,34,760	0/1:21,0:21:15.28:111,0,15	0/0:7,0:7:6.91:0,7,143
chr10	105015390	.	GTGTGTGTGTGTATGTA	G	1041.46	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=4.251;DP=578;FS=3.512;HRun=0;HaplotypeScore=192.2285;InbreedingCoeff=0.4535;MQ=50.98;MQ0=32;MQRankSum=1.172;QD=12.25;ReadPosRankSum=-3.275;VQSLOD=2.2541;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:20.38:0,20,683	0/0:8,0:8:15.01:0,15,386	0/0:10,0:3:8.92:0,9,98	0/0:12,0:5:4.57:0,5,59	0/0:33,0:32:52.40:0,52,1315	0/0:16,0:16:14.29:0,14,322	0/0:27,0:26:18.19:0,18,422	0/1:18,0:16:17.60:426,0,18	0/0:14,0:12:27.07:0,27,976	0/0:25,0:24:68.04:0,68,1760	0/0:16,0:16:33.11:0,33,1364	0/0:29,0:28:50.82:0,51,2468	0/0:26,0:22:59.23:0,59,2198	0/0:17,0:17:36.12:0,36,1047	0/0:20,0:17:33.01:0,33,1591	0/0:22,0:20:54.66:0,55,2396	0/0:27,0:25:57.03:0,57,1656	0/0:17,0:14:9.12:0,9,843	1/1:19,0:16:17.43:236,17,0	0/0:20,0:19:2.36:0,2,18	0/1:29,0:25:20.37:240,0,20	0/0:28,0:25:48.15:0,48,1639	0/0:22,0:22:48.11:0,48,1307	0/0:34,0:33:78.23:0,78,2795	0/0:10,0:11:27.09:0,27,633	0/0:27,0:25:59.69:0,60,1498	1/1:4,15:19:4.06:264,4,0	0/0:11,0:9:21.69:0,22,631
chr10	105015400	.	GTATGTA	G	1302.59	PASS	AB=0.944;AC=11;AF=0.196;AN=56;BaseQRankSum=6.580;DP=594;FS=0.578;HRun=0;HaplotypeScore=119.0559;InbreedingCoeff=0.6969;MQ=51.11;MQ0=31;MQRankSum=1.355;QD=10.42;ReadPosRankSum=-2.863;VQSLOD=1.6981;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:8.34:0,8,276	0/0:13,0:13:10.71:0,11,288	0/0:22,0:8:23.89:0,24,300	0/0:18,0:9:16.60:0,17,225	0/0:37,0:35:61.42:0,61,967	0/0:18,0:18:3.99:0,4,274	0/0:25,0:24:27.43:0,27,417	1/1:8,17:23:46.27:685,46,0	0/0:12,0:11:20.96:0,21,464	0/0:23,0:22:41.80:0,42,731	0/0:17,0:17:38.92:0,39,831	0/0:25,0:24:47.81:0,48,1292	0/0:23,0:20:39.74:0,40,1009	0/0:15,0:15:6.23:0,6,553	0/0:21,0:18:25.55:0,26,658	0/0:25,0:23:57.19:0,57,1299	0/0:24,0:22:36.23:0,36,716	0/1:16,0:14:13.24:13,0,528	1/1:12,6:15:20.90:282,21,0	1/1:2,16:18:0.47:1,0,0	1/1:30,0:26:23.95:383,24,0	0/0:35,0:32:65.10:0,65,1174	0/0:18,0:18:33.11:0,33,590	0/0:32,0:32:73.77:0,74,1551	0/0:15,0:14:1.63:0,2,554	0/0:23,0:21:31.44:0,31,850	1/1:17,0:17:6.33:93,6,0	0/0:9,0:8:11.54:0,12,268
chr10	105017276	.	CA	C	1125.77	PASS	AC=6;AF=0.130;AN=46;BaseQRankSum=6.713;DP=442;FS=5.489;HRun=9;HaplotypeScore=61.4691;InbreedingCoeff=0.9698;MQ=62.66;MQ0=5;MQRankSum=3.494;QD=21.65;ReadPosRankSum=2.254;VQSLOD=4.5901;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.26:0,90,1028	0/0:7,0:7:18.05:0,18,208	0/0:16,0:13:30.06:0,30,263	0/0:15,0:10:16.68:0,17,128	0/0:35,1:35:59.60:0,60,910	1/1:1,20:21:54.03:494,54,0	1/1:0,14:14:42.02:384,42,0	./.	0/0:20,0:20:53.91:0,54,623	0/0:18,0:18:45.13:0,45,519	0/0:10,0:10:24.07:0,24,277	0/0:21,0:21:54.14:0,54,606	0/0:18,0:18:45.13:0,45,519	0/0:20,0:21:57:0,57,637	0/0:31,0:31:85.08:0,85,947	0/0:21,0:21:54.14:0,54,604	0/0:34,0:34:78.23:0,78,900	0/0:21,0:20:39.09:0,39,437	./.	./.	./.	0/0:7,0:7:21.05:0,21,233	0/0:14,0:14:33.09:0,33,372	0/0:14,0:14:42.12:0,42,485	1/1:2,15:17:42.02:384,42,0	0/0:28,1:28:44.72:0,45,745	./.	0/0:4,0:4:9.03:0,9,104
chr10	105018553	.	T	TTA	930.10	PASS	AB=0.731;AC=9;AF=0.173;AN=52;BaseQRankSum=5.351;DP=576;FS=2.926;HRun=0;HaplotypeScore=66.4726;InbreedingCoeff=0.8223;MQ=47.34;MQ0=52;MQRankSum=-5.379;QD=10.00;ReadPosRankSum=0.570;VQSLOD=3.0451;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:29:33.09:0,33,407	0/0:12,0:12:24.08:0,24,305	./.	./.	0/0:38,0:37:54.16:0,54,686	0/0:25,0:25:36.10:0,36,445	0/0:14,0:13:18.02:0,18,211	0/1:12,7:3:31.99:33,0,32	0/0:11,0:11:30.10:0,30,382	0/0:27,0:27:60.19:0,60,764	0/0:21,0:21:39.12:0,39,496	0/0:21,0:21:39.12:0,39,496	0/0:20,0:20:21.07:0,21,267	0/0:18,0:18:30.10:0,30,382	0/0:26,0:26:54.17:0,54,687	0/0:27,0:27:57.17:0,57,713	0/0:29,0:21:36.11:0,36,458	0/0:21,0:19:24.03:0,24,287	1/1:10,8:5:15.05:250,15,0	1/1:13,13:16:21.07:350,21,0	1/1:4,3:4:6.02:100,6,0	0/0:14,0:14:23.91:0,24,305	0/0:16,0:15:30.08:0,30,368	0/0:19,0:18:33.11:0,33,420	0/0:27,0:27:63.20:0,63,802	0/0:35,0:34:93.29:0,93,1173	1/1:12,11:15:21.07:350,21,0	0/0:19,0:19:18.05:0,18,229
chr10	105020863	.	A	ACTGCAAATAC	12277.67	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.270;DP=755;FS=1.408;HRun=0;HaplotypeScore=217.2094;InbreedingCoeff=0.9978;MQ=67.77;MQ0=1;MQRankSum=-14.184;QD=107.70;ReadPosRankSum=-1.876;VQSLOD=4.8354;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,156,5251	0/0:12,0:12:33.11:0,33,1139	0/0:21,0:20:57.13:0,57,1642	0/0:21,0:20:55.69:0,56,1687	0/0:31,0:31:93.32:0,93,3081	0/0:22,0:21:63.20:0,63,2121	0/0:34,0:34:99:0,102,3291	1/1:15,2:24:63.15:2847,63,0	0/0:34,0:34:93.32:0,93,3249	0/0:47,0:47:99:0,138,4624	0/0:29,0:29:87.28:0,87,2881	0/0:31,0:31:84.23:0,84,2481	0/0:32,0:32:96.30:0,96,3194	0/0:31,0:31:84.29:0,84,2935	0/0:31,0:31:78.25:0,78,2645	0/0:29,0:29:75.24:0,75,2413	0/0:22,0:22:66.21:0,66,2168	0/0:18,0:18:51.05:0,51,1532	1/1:6,7:15:42.05:2012,42,0	1/1:12,16:33:78.27:3955,78,0	1/1:4,3:11:18.06:829,18,0	0/0:23,0:23:69.21:0,69,2140	0/0:18,0:18:54.19:0,54,1886	0/0:32,0:32:93.32:0,93,3219	0/0:31,0:31:93.31:0,93,3090	0/0:27,0:27:81.27:0,81,2690	1/1:4,14:24:51.18:2635,51,0	0/0:9,0:9:27.09:0,27,943
chr10	105021089	.	GT	G	1527.32	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.381;DP=740;FS=6.716;HRun=3;HaplotypeScore=95.8851;InbreedingCoeff=0.9718;MQ=57.24;MQ0=1;MQRankSum=-12.188;QD=16.78;ReadPosRankSum=-2.187;VQSLOD=2.5875;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:65:99:0,147,2051	0/0:16,0:16:45.15:0,45,643	0/0:34,0:24:69.19:0,69,926	0/0:21,0:20:54.14:0,54,720	0/0:33,0:33:96.24:0,96,1356	0/0:27,0:27:66.22:0,66,949	0/0:31,0:31:90.11:0,90,1221	1/1:3,24:26:69.09:724,69,0	0/0:24,0:24:72.21:0,72,1000	0/0:45,0:45:99:0,132,1867	0/0:20,0:20:54.15:0,54,755	0/0:28,0:28:66.18:0,66,927	0/0:30,0:29:78.26:0,78,1124	0/0:24,0:24:66.22:0,66,950	0/0:24,0:24:63.21:0,63,906	0/0:36,0:36:99:0,99,1425	0/0:24,0:24:66.21:0,66,918	0/0:25,0:25:66.15:0,66,888	1/1:2,11:12:30.07:319,30,0	1/1:3,26:28:29.14:311,29,0	1/1:0,10:9:6.96:76,7,0	0/0:30,0:30:84.28:0,84,1209	0/0:31,0:31:75.25:0,75,1075	0/0:23,0:23:60.20:0,60,864	0/0:33,0:32:81.27:0,81,1167	0/0:21,0:21:60.20:0,60,864	1/1:0,12:11:29.67:268,30,0	0/0:4,0:4:12.04:0,12,172
chr10	105021098	.	CAGGACT	C	2847.84	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.210;DP=748;FS=5.477;HRun=0;HaplotypeScore=163.6764;InbreedingCoeff=0.9784;MQ=57.47;MQ0=2;MQRankSum=-10.711;QD=34.73;ReadPosRankSum=-0.877;VQSLOD=3.2178;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,151,5306	0/0:16,0:16:48.16:0,48,1646	0/0:35,0:27:78.22:0,78,2270	0/0:30,0:26:69.23:0,69,2125	0/0:34,0:34:90.31:0,90,3144	0/0:28,0:28:69.24:0,69,2430	0/0:29,0:29:78.27:0,78,2704	1/1:7,17:23:48.16:1047,48,0	0/0:25,0:25:72.25:0,72,2420	0/0:47,0:46:99:0,135,4731	0/0:18,0:17:51.18:0,51,1791	0/0:29,0:29:75.24:0,75,2459	0/0:30,0:29:78.25:0,78,2585	0/0:27,0:27:75.26:0,75,2665	0/0:27,0:27:72.25:0,72,2494	0/0:37,0:37:99:0,108,3732	0/0:25,0:25:72.25:0,72,2484	0/0:24,0:24:72.25:0,72,2530	1/1:2,10:11:27.09:598,27,0	1/1:3,21:23:30.10:664,30,0	1/1:4,5:8:9.03:200,9,0	0/0:30,0:30:90.31:0,90,3126	0/0:30,0:30:78.25:0,78,2648	0/0:28,0:28:72.25:0,72,2510	0/0:32,0:31:84.29:0,84,2966	0/0:22,0:22:60.21:0,60,2082	1/1:4,9:12:24.08:511,24,0	0/0:4,0:4:12.04:0,12,428
chr10	105022135	.	A	AT	2267.62	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-10.651;DP=671;FS=0.968;HRun=8;HaplotypeScore=83.4272;InbreedingCoeff=0.8759;MQ=55.00;MQ0=17;MQRankSum=3.173;QD=23.87;ReadPosRankSum=-0.023;VQSLOD=3.9831;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:30:80.94:0,81,729	1/1:0,10:10:27.08:311,27,0	0/0:19,0:11:13.11:0,13,136	0/1:11,0:6:8.53:9,0,93	0/0:33,0:32:81.04:0,81,741	1/1:3,18:20:51.15:588,51,0	1/1:3,21:23:60.18:692,60,0	0/0:39,0:30:80.29:0,80,691	0/0:11,0:11:24:0,24,219	0/0:42,0:42:99:0,111,1015	0/0:12,0:12:30.01:0,30,274	0/0:18,0:18:42.01:0,42,384	0/0:24,0:24:54.01:0,54,493	0/0:22,0:22:57.01:0,57,517	0/0:16,0:16:36.01:0,36,329	0/0:26,0:26:78:0,78,701	0/0:28,0:28:72.01:0,72,652	0/0:22,0:21:59.94:0,60,527	0/0:29,0:21:53.81:0,54,471	0/0:32,0:25:60.07:0,60,527	0/0:16,0:16:44.95:0,45,401	0/0:17,0:17:42.01:0,42,384	0/0:25,0:25:66.01:0,66,599	0/0:21,0:20:57.03:0,57,521	1/1:3,26:29:72.21:830,72,0	0/0:37,0:37:99:0,102,929	0/0:26,0:25:62.97:0,63,575	0/0:27,0:26:75.04:0,75,686
chr10	105022197	.	ATTG	A	72.22	PASS	AB=0.748;AC=2;AF=0.036;AN=56;BaseQRankSum=4.358;DP=645;FS=1.646;HRun=0;HaplotypeScore=72.3330;InbreedingCoeff=-0.0504;MQ=56.66;MQ0=55;MQRankSum=-1.611;QD=1.85;ReadPosRankSum=-0.318;VQSLOD=1.6238;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:60.14:0,60,1150	0/0:13,0:13:24.03:0,24,398	0/0:24,0:6:7.48:0,7,126	0/0:23,0:6:3.39:0,3,36	0/0:28,0:28:41.99:0,42,777	0/0:21,0:21:15.05:0,15,305	0/0:20,0:17:9.03:0,9,175	0/1:12,4:4:6.30:6,0,181	0/0:17,0:17:12.03:0,12,218	0/0:42,0:38:99:0,106,2244	0/0:15,0:15:27.01:0,27,532	0/0:25,0:25:30.10:0,30,599	0/0:26,0:26:33.58:0,34,663	0/0:24,0:24:39.12:0,39,774	0/0:21,0:21:12.04:0,12,243	0/0:26,0:26:51.17:0,51,1048	0/0:25,0:25:54.16:0,54,1081	0/0:22,0:20:30.08:0,30,573	0/0:15,4:6:12.04:0,12,257	0/1:13,10:17:99:146,0,511	0/0:7,2:6:12.04:0,12,254	0/0:26,0:25:42.14:0,42,861	0/0:24,0:23:39.13:0,39,812	0/0:16,0:15:30.10:0,30,599	0/0:33,0:33:60.21:0,60,1261	0/0:39,0:37:99:0,102,2139	0/0:20,1:14:30.10:0,30,575	0/0:13,0:13:15.05:0,15,258
chr10	105022654	.	A	ACT	386.91	PASS	AB=1.000;AC=5;AF=0.100;AN=50;BaseQRankSum=4.900;DP=652;FS=2.701;HRun=0;HaplotypeScore=59.4191;InbreedingCoeff=0.7413;MQ=55.98;MQ0=9;MQRankSum=-5.278;QD=8.23;ReadPosRankSum=-4.128;VQSLOD=2.2778;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:90.27:0,90,1196	0/0:13,0:13:21.07:0,21,288	0/1:28,0:7:0.95:1,0,107	0/0:31,0:6:11.24:0,11,131	0/0:28,0:27:39.12:0,39,519	0/0:26,0:25:60.20:0,60,824	0/0:36,0:36:51.17:0,51,697	1/1:2,9:10:27.09:440,27,0	0/0:30,0:30:66.21:0,66,890	0/0:27,0:27:75.25:0,75,1030	0/0:13,0:12:12.04:0,12,165	0/0:38,0:37:75.20:0,75,1029	0/0:30,0:30:65.98:0,66,904	0/0:27,0:27:60.20:0,60,824	0/0:29,0:29:63.20:0,63,845	0/0:29,0:29:78.25:0,78,1055	0/0:36,0:36:72.21:0,72,969	0/0:22,0:22:51.16:0,51,684	./.	./.	1/1:2,6:4:3.01:53,3,0	0/0:19,0:19:30.10:0,30,412	0/0:22,0:21:30.10:0,30,411	0/0:28,0:28:63.21:0,63,863	0/0:16,0:18:42.14:0,42,576	0/0:26,0:26:72.19:0,72,951	./.	0/0:14,0:14:30.10:0,30,412
chr10	105022716	.	G	GA	90.50	PASS	AB=0.680;AC=1;AF=0.020;AN=50;BaseQRankSum=2.866;DP=701;FS=5.221;HRun=1;HaplotypeScore=46.5846;InbreedingCoeff=-0.0323;MQ=54.05;MQ0=118;MQRankSum=-2.887;QD=5.32;ReadPosRankSum=2.545;VQSLOD=0.7422;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:42:51.17:0,51,662	0/0:13,0:12:11.87:0,12,155	0/0:29,0:5:8.96:0,9,96	0/0:23,0:10:10.12:0,10,95	0/0:26,0:24:30.09:0,30,389	0/0:19,0:17:27.07:0,27,333	0/0:42,0:34:21.07:0,21,272	./.	0/0:28,0:25:42.12:0,42,531	0/0:26,0:22:57.18:0,57,737	0/0:18,0:11:9.03:0,9,117	0/0:31,0:28:32.92:0,33,428	0/0:30,0:24:35.98:0,36,463	0/0:26,0:24:33.11:0,33,428	0/0:40,0:35:51.17:0,51,661	0/0:30,0:27:39.13:0,39,506	0/0:34,0:30:45.15:0,45,583	0/0:24,0:23:42.11:0,42,526	./.	0/0:8,6:7:3.01:0,3,39	./.	0/0:30,0:22:33.09:0,33,413	0/0:27,0:24:14.98:0,15,194	0/0:22,0:21:36.12:0,36,467	0/0:34,0:23:21.07:0,21,273	0/0:31,0:27:78.24:0,78,999	0/1:9,8:7:23.82:164,0,24	0/0:7,0:6:15.05:0,15,195
chr10	105023056	.	A	AC	549.18	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=-4.835;DP=707;FS=3.162;HRun=6;HaplotypeScore=61.4018;InbreedingCoeff=0.6158;MQ=44.64;MQ0=138;MQRankSum=2.104;QD=6.03;ReadPosRankSum=0.691;VQSLOD=-0.3974;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:39:48.07:0,48,490	0/0:10,0:7:9.02:0,9,92	0/0:21,0:1:3.01:0,3,30	0/1:27,0:7:3.55:4,0,48	0/0:18,0:12:6.01:0,6,61	1/1:3,19:20:30.10:377,30,0	1/1:3,27:26:15.05:189,15,0	0/0:37,0:24:54.09:0,54,535	0/0:23,0:21:42.09:0,42,428	0/0:26,0:20:60.14:0,60,611	0/0:22,0:13:3.01:0,3,31	0/0:32,0:28:45.03:0,45,448	0/0:32,0:26:33.06:0,33,337	0/0:22,0:17:27.02:0,27,275	0/0:20,0:12:15.03:0,15,153	0/0:31,0:27:41.73:0,42,428	0/0:36,0:31:36.05:0,36,358	0/0:28,0:24:21.01:0,21,214	0/0:22,0:8:24.05:0,24,245	0/0:15,0:11:3.01:0,3,31	0/0:64,0:38:30.07:0,30,306	0/0:16,0:12:3.01:0,3,31	0/0:18,0:16:6.01:0,6,61	0/0:22,0:21:21.05:0,21,214	1/1:0,12:9:9.03:113,9,0	0/0:21,2:21:22.39:0,22,543	0/0:29,0:16:33.07:0,33,336	./.
chr10	105023676	.	C	CAT	1092.96	PASS	AB=0.813;AC=7;AF=0.152;AN=46;BaseQRankSum=7.766;DP=901;FS=5.914;HRun=0;HaplotypeScore=41.2217;InbreedingCoeff=0.3491;MQ=38.20;MQ0=55;MQRankSum=-0.981;QD=5.63;ReadPosRankSum=2.481;VQSLOD=1.5703;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:16:2.99:0,3,23	0/0:15,0:15:12.04:0,12,172	0/0:30,0:1:3.01:0,3,42	./.	0/0:26,0:26:30.10:0,30,429	./.	0/0:33,0:31:3.01:0,3,43	0/0:25,23:23:31.20:0,31,729	./.	0/0:43,0:35:99:0,102,1446	0/0:20,0:19:9.03:0,9,129	0/0:46,0:42:6.02:0,6,85	0/1:42,0:36:0.01:0,0,0	0/0:47,0:42:2.81:0,3,43	0/0:38,0:33:6.01:0,6,68	0/0:52,0:44:11.93:0,12,170	./.	./.	0/1:10,13:10:70.92:150,0,71	0/1:15,5:20:99:244,0,185	1/1:59,18:59:21.04:384,21,0	0/0:24,0:21:24.08:0,24,344	0/0:23,0:23:18.06:0,18,258	0/0:28,0:25:3.01:0,3,43	0/0:25,0:25:14.76:0,15,215	0/0:43,0:42:99:0,126,1805	1/1:13,19:21:24.08:439,24,0	0/0:9,0:8:6.02:0,6,86
chr10	105024515	.	AT	A	4339.93	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.247;DP=834;FS=6.231;HRun=6;HaplotypeScore=82.0354;InbreedingCoeff=0.9952;MQ=54.66;MQ0=61;MQRankSum=-6.781;QD=21.92;ReadPosRankSum=-1.473;VQSLOD=3.4838;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:50:99:0,126,1641	0/0:8,0:8:21.07:0,21,276	0/0:35,0:9:19.25:0,19,187	0/0:29,0:16:17.03:0,17,181	0/0:20,0:20:42.14:0,42,552	0/0:21,0:20:48.16:0,48,631	0/0:19,0:18:33.11:0,33,434	1/1:7,33:25:63.15:677,63,0	0/0:23,0:23:57.17:0,57,732	0/0:29,0:28:78.24:0,78,1013	0/0:25,0:24:45.15:0,45,588	0/0:33,0:33:87.22:0,87,1097	0/0:35,0:35:75.10:0,75,967	0/0:29,0:29:69.18:0,69,887	0/0:39,0:39:84.27:0,84,1105	0/0:24,0:24:54.18:0,54,710	0/0:26,0:26:66.21:0,66,866	0/0:32,0:32:84.26:0,84,1090	1/1:3,31:30:87.21:926,87,0	1/1:2,41:43:99:1063,99,0	1/1:3,38:39:72.17:773,72,0	0/0:26,0:26:60.19:0,60,783	0/0:32,0:32:72.23:0,72,947	0/0:40,0:40:93.30:0,93,1224	0/0:22,0:22:54.18:0,54,710	0/0:17,0:17:48.16:0,48,630	1/1:4,36:38:84.20:901,84,0	0/0:20,0:20:47.97:0,48,609
chr10	105025365	.	G	GCT	936.40	PASS	AB=0.888;AC=19;AF=0.396;AN=48;BaseQRankSum=0.650;DP=646;FS=2.882;HRun=0;HaplotypeScore=111.5796;InbreedingCoeff=0.3870;MQ=55.77;MQ0=22;MQRankSum=0.660;QD=3.57;ReadPosRankSum=1.839;VQSLOD=2.6500;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,1:28:17.85:18,0,203	1/1:7,5:13:8.92:133,9,0	./.	./.	0/0:16,0:17:22.61:0,23,177	1/1:23,0:23:7.19:81,7,0	0/1:34,0:30:14.04:18,0,14	./.	0/0:14,0:25:11.36:0,11,56	0/0:18,0:16:20.96:0,21,200	1/1:9,1:10:3.01:44,3,0	0/0:15,0:17:14.70:0,15,125	0/0:28,0:26:35.99:0,36,348	0/0:14,0:16:11.84:0,12,102	0/0:18,0:21:17.87:0,18,176	0/0:15,0:19:20.58:0,21,173	0/1:26,6:30:55.42:369,0,55	0/1:9,8:17:36.98:180,0,37	1/1:23,0:21:2.99:24,3,0	1/1:17,0:14:5.99:49,6,0	./.	0/0:24,0:24:20.42:0,20,154	0/0:15,0:15:23.52:0,24,185	0/1:25,1:27:17.07:17,0,204	1/1:20,0:17:2.99:24,3,0	0/0:28,1:28:13.05:0,13,124	1/1:15,0:17:15:144,15,0	0/0:11,0:14:5.84:0,6,46
chr10	105025424	.	G	GTC	1001.42	PASS	AB=1.000;AC=12;AF=0.222;AN=54;BaseQRankSum=7.080;DP=549;FS=0.692;HRun=0;HaplotypeScore=88.2071;InbreedingCoeff=0.7495;MQ=58.80;MQ0=29;MQRankSum=-4.853;QD=9.92;ReadPosRankSum=-3.718;VQSLOD=2.7819;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:66.76:0,67,887	0/0:10,0:10:17.27:0,17,200	0/0:29,0:12:17.35:0,17,333	0/0:49,0:20:30.84:0,31,402	0/1:21,0:21:0.30:0,0,229	1/1:6,0:5:2.94:18,3,0	0/1:11,0:10:2.34:18,0,2	1/1:9,19:20:45.11:696,45,0	0/0:28,0:27:48.04:0,48,605	0/0:18,0:15:14.15:0,14,381	0/0:15,0:15:32.89:0,33,401	0/0:20,0:20:57.18:0,57,741	0/0:17,0:17:39.10:0,39,492	0/0:13,0:13:24.06:0,24,297	0/0:23,0:22:57.16:0,57,723	0/0:27,0:26:66.14:0,66,796	0/0:25,0:25:60.01:0,60,768	0/0:23,0:23:58.38:0,58,751	1/1:5,2:4:9:97,9,0	1/1:5,7:8:3.01:39,3,0	0/0:4,8:11:0.47:0,0,1	0/0:12,0:12:26.92:0,27,326	0/0:25,0:24:54.15:0,54,684	0/0:29,0:29:75.18:0,75,940	./.	0/0:29,0:27:69.21:0,69,874	1/1:2,9:11:18.06:287,18,0	0/0:10,0:10:24.04:0,24,293
chr10	105025588	.	AATAGC	A	2210.68	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.934;DP=690;FS=1.373;HRun=0;HaplotypeScore=125.3268;InbreedingCoeff=0.9552;MQ=58.08;MQ0=14;MQRankSum=-10.018;QD=36.24;ReadPosRankSum=0.154;VQSLOD=3.4681;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,4359	0/0:17,0:17:51.18:0,51,1597	0/0:16,0:7:21.07:0,21,607	0/0:24,0:13:30.10:0,30,843	0/0:23,0:23:66.23:0,66,2101	0/0:23,0:23:60.21:0,60,1904	0/0:36,0:36:99:0,102,3236	1/1:2,11:11:30.06:622,30,0	0/0:34,0:34:99:0,99,3118	0/0:32,0:32:96.32:0,96,2957	0/0:23,0:23:69.24:0,69,2213	0/0:31,0:31:93.32:0,93,2904	0/0:23,0:23:63.22:0,63,2009	0/0:27,0:27:81.28:0,81,2609	0/0:38,0:38:99:0,111,3510	0/0:25,0:25:75.26:0,75,2423	0/0:26,0:25:72.22:0,72,2211	0/0:26,0:26:78.25:0,78,2381	1/1:3,8:6:18.06:401,18,0	1/1:0,12:12:30.10:668,30,0	1/1:0,11:10:5.36:86,5,0	0/0:23,0:23:69.24:0,69,2108	0/0:21,0:21:63.20:0,63,1938	0/0:53,0:52:99:0,160,5076	0/0:19,0:19:54.19:0,54,1744	0/0:38,0:38:99:0,108,3463	1/1:0,14:13:27.09:602,27,0	0/0:3,0:3:9.03:0,9,265
chr10	105025891	.	CA	C	5429.68	PASS	AB=0.583;AC=9;AF=0.161;AN=56;BaseQRankSum=10.506;DP=858;FS=0.347;HRun=1;HaplotypeScore=86.0690;InbreedingCoeff=0.8471;MQ=60.80;MQ0=40;MQRankSum=0.479;QD=33.52;ReadPosRankSum=-0.994;VQSLOD=4.2738;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.28:0,93,1432	0/0:14,0:14:42.14:0,42,671	0/0:36,0:18:53.92:0,54,844	0/0:41,0:22:60.04:0,60,922	0/0:28,0:28:75.26:0,75,1191	0/0:29,0:28:78.26:0,78,1234	0/0:48,0:48:99:0,138,2178	0/1:12,30:32:11.53:998,0,12	0/0:25,0:25:72.20:0,72,1122	0/0:30,0:30:90.31:0,90,1424	0/0:34,0:34:87.28:0,87,1368	0/0:32,0:32:96.28:0,96,1495	0/0:32,0:32:96.33:0,96,1534	0/0:27,0:27:81.28:0,81,1294	0/0:38,0:38:99:0,111,1729	0/0:32,0:32:93.27:0,93,1429	0/0:39,0:39:99:0,117,1852	0/0:25,0:25:72.25:0,72,1144	1/1:6,17:18:6.19:664,6,0	1/1:0,22:22:63.21:878,63,0	1/1:0,40:40:99:1592,114,0	0/0:27,0:27:81.26:0,81,1271	0/0:25,0:25:69.22:0,69,1080	0/0:22,0:22:66.13:0,66,976	0/0:37,0:37:99:0,108,1727	0/0:37,0:37:99:0,108,1644	1/1:0,35:33:93.31:1297,93,0	0/0:6,0:6:18.06:0,18,288
chr10	105026120	.	A	AC	6430	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.335;DP=729;FS=0.328;HRun=2;HaplotypeScore=88.8482;InbreedingCoeff=0.9992;MQ=65.82;MQ0=4;MQRankSum=-1.176;QD=31.06;ReadPosRankSum=2.351;VQSLOD=4.5565;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:99:0,111,1469	0/0:13,0:13:39.12:0,39,530	0/0:30,0:30:74.06:0,74,1010	0/0:23,0:22:20.78:0,21,625	0/0:31,0:31:93.29:0,93,1270	1/1:1,21:20:40.10:629,40,0	1/1:1,24:17:42.14:556,42,0	1/1:1,17:18:51.17:720,51,0	0/0:26,0:26:78.20:0,78,1052	0/0:32,0:32:90.28:0,90,1213	0/0:18,0:18:48.15:0,48,646	0/0:15,0:15:45.15:0,45,629	0/0:27,0:27:81.23:0,81,1095	0/0:38,0:38:99:0,114,1555	0/0:23,0:23:69.23:0,69,960	0/0:29,0:29:87.29:0,87,1204	0/0:31,0:31:93.31:0,93,1298	0/0:22,0:22:63.13:0,63,830	1/1:7,16:20:44.91:663,45,0	1/1:3,31:32:72:1094,72,0	1/1:3,23:25:63.21:878,63,0	0/0:26,0:26:78.26:0,78,1090	0/0:19,0:19:57.16:0,57,762	0/0:32,0:32:93.30:0,93,1284	1/1:1,39:37:87.29:1225,87,0	0/0:34,0:34:99:0,99,1368	1/1:0,19:17:48.16:665,48,0	0/0:15,0:15:45.15:0,45,629
chr10	105026383	.	T	TCA	6679.17	PASS	AB=0.517;AC=9;AF=0.161;AN=56;BaseQRankSum=-3.032;DP=771;FS=1.652;HRun=0;HaplotypeScore=99.1307;InbreedingCoeff=0.8811;MQ=78.55;MQ0=1;MQRankSum=1.128;QD=47.71;ReadPosRankSum=0.803;VQSLOD=5.9803;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,2259	0/0:11,0:11:33.09:0,33,487	0/0:20,0:20:52.31:0,52,738	0/0:22,0:22:60.14:0,60,880	0/0:21,0:21:57.18:0,57,884	0/0:15,0:15:45.11:0,45,698	0/0:38,0:38:99:0,114,1824	1/1:1,29:30:84.23:1524,84,0	0/0:31,0:31:93.29:0,93,1463	0/0:37,0:37:99:0,111,1704	0/0:22,0:22:63.21:0,63,1014	0/0:33,0:33:99:0,99,1580	0/0:39,0:39:99:0,114,1849	0/0:29,0:29:87.27:0,87,1366	0/0:27,0:27:81.26:0,81,1297	0/0:30,0:30:90.28:0,90,1412	0/0:28,0:28:84.29:0,84,1369	0/0:28,0:28:81.21:0,81,1257	0/1:1,12:14:9.80:667,0,10	1/1:0,22:24:54.19:1077,54,0	1/1:0,46:48:99:2620,129,0	0/0:25,0:25:63.22:0,63,1018	0/0:22,0:22:63.21:0,63,996	0/0:28,0:28:84.27:0,84,1340	0/0:33,0:32:93.32:0,93,1495	0/0:28,0:28:84.27:0,84,1326	1/1:0,18:20:39.03:792,39,0	0/0:14,0:14:42.14:0,42,674
chr10	105027918	.	G	GA	1259.90	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=2.460;DP=194;FS=4.844;HRun=0;HaplotypeScore=38.8249;InbreedingCoeff=0.8370;MQ=103.05;MQ0=4;MQRankSum=-4.683;QD=24.23;ReadPosRankSum=1.094;VQSLOD=4.1900;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.09:0,39,501	0/0:1,0:1:3.01:0,3,39	0/0:21,0:20:56.46:0,56,635	0/0:17,0:15:34.28:0,34,354	0/0:5,0:5:15.02:0,15,167	1/1:2,2:3:9.02:117,9,0	1/1:1,5:5:12.04:187,12,0	1/1:2,6:4:11.96:116,12,0	0/0:9,0:9:27.08:0,27,360	0/0:4,0:4:12.04:0,12,167	0/0:3,0:3:9.01:0,9,95	0/0:14,0:14:33.10:0,33,436	0/0:8,0:8:24.07:0,24,316	0/0:6,0:6:18.04:0,18,212	0/0:7,0:7:21.07:0,21,291	0/0:6,0:6:18.06:0,18,251	0/0:6,0:6:17.39:0,17,181	0/0:9,0:9:24.01:0,24,311	1/1:1,1:1:3.01:47,3,0	1/1:0,5:4:9.03:141,9,0	1/1:2,8:10:21.07:327,21,0	0/0:5,0:5:15.05:0,15,209	0/0:2,0:2:6.01:0,6,68	0/0:3,0:3:9.03:0,9,125	1/1:0,12:8:24.08:372,24,0	0/0:3,0:3:9.03:0,9,126	1/1:0,5:3:9.03:140,9,0	./.
chr10	105027986	.	T	TATGGTC	1017.52	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=1.010;DP=325;FS=0.000;HRun=0;HaplotypeScore=63.2086;InbreedingCoeff=0.7648;MQ=67.99;MQ0=28;MQRankSum=-4.912;QD=17.85;ReadPosRankSum=-0.431;VQSLOD=2.5119;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.25:0,72,1702	0/0:1,0:1:3.01:0,3,71	0/0:19,0:17:45.05:0,45,1066	0/0:18,0:16:24.02:0,24,753	0/0:13,0:13:36.11:0,36,805	1/1:1,11:2:3.01:107,3,0	1/1:2,9:3:6.02:213,6,0	1/1:7,3:5:6.02:214,6,0	0/0:13,0:13:33.11:0,33,765	0/0:15,0:15:42.13:0,42,947	0/0:9,0:9:21.07:0,21,453	0/0:17,0:17:48.16:0,48,1135	0/0:17,0:17:51.16:0,51,1138	0/0:16,0:16:48.16:0,48,1135	0/0:18,0:18:54.19:0,54,1277	0/0:14,0:14:39.13:0,39,903	0/0:16,0:16:48.14:0,48,1086	0/0:12,0:12:33.11:0,33,780	1/1:3,0:2:3.01:106,3,0	1/1:4,2:1:3.01:107,3,0	./.	0/0:12,0:11:33.10:0,33,732	0/0:8,0:8:24.08:0,24,535	0/0:13,0:13:39.12:0,39,844	1/1:2,5:2:3.01:107,3,0	0/0:6,0:6:18.05:0,18,381	1/1:1,6:3:9.03:319,9,0	0/0:4,0:4:12.04:0,12,284
chr10	105028066	.	C	CTATT	5091.77	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-8.216;DP=473;FS=4.043;HRun=0;HaplotypeScore=69.3528;InbreedingCoeff=0.9897;MQ=74.75;MQ0=11;MQRankSum=-7.402;QD=48.49;ReadPosRankSum=1.213;VQSLOD=5.3576;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,2358	0/0:6,0:6:18.06:0,18,341	0/0:32,0:30:84.09:0,84,1380	0/0:31,0:27:69.15:0,69,1200	0/0:11,0:11:27.09:0,27,496	1/1:1,6:6:18.02:424,18,0	1/1:0,12:11:24.08:647,24,0	1/1:4,13:9:27.09:633,27,0	0/0:14,0:14:39.13:0,39,731	0/0:18,0:18:54.19:0,54,1016	0/0:7,0:7:21.07:0,21,399	0/0:20,0:20:48.16:0,48,911	0/0:20,0:20:60.17:0,60,1103	0/0:24,0:24:63.22:0,63,1171	0/0:14,0:14:36.12:0,36,676	0/0:16,0:16:45.15:0,45,854	0/0:32,0:32:96.31:0,96,1775	0/0:23,0:23:69.21:0,69,1254	1/1:2,9:7:15.01:313,15,0	1/1:2,9:9:27.09:728,27,0	1/1:1,21:22:57.15:1477,57,0	0/0:9,0:9:24.08:0,24,436	0/0:11,0:11:33.11:0,33,626	0/0:20,0:20:60.21:0,60,1139	1/1:2,7:8:17.78:485,18,0	0/0:10,0:10:27.08:0,27,483	1/1:6,7:7:20.96:385,21,0	0/0:8,0:8:21.07:0,21,399
chr10	105029088	.	GT	G	1094.02	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=8.554;DP=616;FS=25.211;HRun=1;HaplotypeScore=49.3584;InbreedingCoeff=0.8346;MQ=48.60;MQ0=91;MQRankSum=-8.448;QD=15.19;ReadPosRankSum=0.029;VQSLOD=1.7241;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:46:72.25:0,72,1149	0/0:10,0:9:21.07:0,21,335	0/0:30,0:1:3.01:0,3,48	0/0:27,0:2:2.98:0,3,21	0/0:31,0:30:69.22:0,69,1075	1/1:0,6:5:9.03:126,9,0	1/1:0,6:4:6.02:84,6,0	1/1:7,16:4:9.03:126,9,0	0/0:31,0:30:54.17:0,54,834	0/0:32,0:30:87.30:0,87,1390	0/0:21,0:18:39.13:0,39,623	0/0:21,0:21:51.17:0,51,815	0/0:27,0:26:63.17:0,63,948	0/0:28,0:28:60.20:0,60,955	0/0:30,0:29:69.22:0,69,1077	0/0:26,0:26:66.21:0,66,1031	0/0:18,0:18:27.09:0,27,431	0/0:22,0:20:42.11:0,42,639	./.	1/1:1,5:2:6.02:84,6,0	./.	0/0:31,0:31:69.23:0,69,1090	0/0:23,0:20:30.10:0,30,479	0/0:35,0:33:33.11:0,33,527	1/1:1,4:3:6.02:84,6,0	0/0:35,0:31:93.32:0,93,1487	1/1:0,26:23:54.02:753,54,0	0/0:11,0:11:18.04:0,18,264
chr10	105029422	.	CA	C	1714.14	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.253;DP=606;FS=1.211;HRun=2;HaplotypeScore=56.6392;InbreedingCoeff=0.9046;MQ=50.15;MQ0=91;MQRankSum=-4.925;QD=19.26;ReadPosRankSum=-0.099;VQSLOD=3.5571;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:96.29:0,96,1395	0/0:6,0:5:12.04:0,12,179	0/0:32,0:4:8.39:0,8,86	0/0:29,0:1:0:0,0,0	0/0:23,0:22:57.18:0,57,831	0/0:6,0:3:6.02:0,6,90	0/0:10,0:5:12.04:0,12,179	1/1:1,15:7:21.05:248,21,0	0/0:25,0:25:63.21:0,63,943	0/0:25,0:23:69.22:0,69,1000	0/0:24,0:22:51.17:0,51,760	0/0:26,0:26:66.20:0,66,950	0/0:21,0:21:63.21:0,63,943	0/0:19,0:19:48.14:0,48,681	0/0:30,0:30:81.27:0,81,1194	0/0:31,0:30:75.24:0,75,1102	0/0:44,0:44:99:0,111,1636	0/0:21,0:21:51.16:0,51,738	1/1:4,10:7:21.06:258,21,0	1/1:1,15:11:30.05:369,30,0	1/1:1,25:21:39.13:506,39,0	0/0:22,0:22:45.15:0,45,674	0/0:23,0:20:48.16:0,48,717	0/0:21,0:20:45.15:0,45,673	0/0:7,0:5:12.04:0,12,179	0/0:20,0:19:57.19:0,57,854	1/1:0,17:14:39.13:505,39,0	0/0:12,0:10:24.08:0,24,359
chr10	105030058	.	GTA	G	150.50	PASS	AC=2;AF=0.042;AN=48;BaseQRankSum=4.091;DP=632;FS=18.516;HRun=0;HaplotypeScore=91.4984;InbreedingCoeff=0.8964;MQ=72.28;MQ0=3;MQRankSum=-4.171;QD=13.68;ReadPosRankSum=0.523;VQSLOD=1.8960;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,166,3273	0/0:15,0:15:45.15:0,45,902	0/0:21,0:21:63.16:0,63,1154	0/0:21,0:20:59.98:0,60,961	0/0:21,0:21:63.22:0,63,1256	0/0:22,0:22:63.17:0,63,1237	0/0:25,0:25:66.23:0,66,1339	./.	0/0:28,0:28:84.29:0,84,1706	0/0:28,0:27:81.24:0,81,1546	0/0:20,0:20:57.20:0,57,1157	0/0:32,0:32:93.31:0,93,1838	0/0:29,0:29:87.30:0,87,1752	0/0:36,0:36:99:0,108,2134	0/0:32,0:31:90.31:0,90,1826	0/0:34,0:34:99:0,102,2072	0/0:34,0:34:99:0,102,2072	0/0:15,0:14:42.13:0,42,798	./.	1/1:0,11:7:18.02:240,18,0	./.	0/0:33,0:33:99:0,99,2005	0/0:31,0:30:90.30:0,90,1775	0/0:21,0:21:63.20:0,63,1242	0/0:24,0:23:66.21:0,66,1304	0/0:39,0:39:99:0,117,2301	./.	0/0:2,0:2:6.01:0,6,86
chr10	105030724	.	AG	A	93.75	PASS	AC=2;AF=0.042;AN=48;BaseQRankSum=3.817;DP=523;FS=4.233;HRun=1;HaplotypeScore=62.2957;InbreedingCoeff=0.9757;MQ=63.69;MQ0=0;MQRankSum=-3.792;QD=13.39;ReadPosRankSum=1.290;VQSLOD=2.7647;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,2138	0/0:12,0:12:36.12:0,36,562	0/0:30,0:28:81.12:0,81,1231	0/0:24,0:24:69.20:0,69,1082	0/0:29,0:29:87.19:0,87,1306	0/0:18,0:17:51.17:0,51,815	0/0:15,0:14:42.14:0,42,671	./.	0/0:17,0:17:51.16:0,51,792	0/0:25,0:25:75.23:0,75,1153	0/0:21,0:21:60.18:0,60,912	0/0:17,0:17:51.16:0,51,791	0/0:16,0:16:48.12:0,48,705	0/0:13,0:13:39.13:0,39,622	0/0:15,0:15:45.15:0,45,719	0/0:6,0:6:18.06:0,18,288	0/0:28,0:28:84.24:0,84,1289	0/0:25,0:25:75.21:0,75,1148	./.	1/1:1,6:5:15.05:181,15,0	./.	0/0:21,0:21:63.21:0,63,1004	0/0:21,0:21:63.18:0,63,955	0/0:29,0:29:84.23:0,84,1281	0/0:33,0:32:87.29:0,87,1364	0/0:30,0:30:90.28:0,90,1375	./.	0/0:17,0:17:51.17:0,51,808
chr10	105031133	.	A	ACT	3057.86	PASS	AB=0.933;AC=9;AF=0.188;AN=48;BaseQRankSum=-1.124;DP=633;FS=1.671;HRun=0;HaplotypeScore=86.7200;InbreedingCoeff=0.8117;MQ=77.10;MQ0=2;MQRankSum=-1.077;QD=33.98;ReadPosRankSum=0.468;VQSLOD=5.9052;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1695	0/1:13,1:14:18.69:19,0,510	0/0:33,0:29:62.21:0,62,940	0/0:24,0:23:57.13:0,57,817	0/0:24,0:24:63.21:0,63,965	1/1:1,21:21:57.20:1100,57,0	1/1:2,24:24:57.20:1100,57,0	./.	0/0:29,0:29:87.28:0,87,1304	0/0:32,0:32:93.30:0,93,1385	0/0:24,0:24:72.23:0,72,1074	0/0:34,0:34:99:0,99,1508	0/0:26,0:26:75.25:0,75,1144	0/0:30,0:30:87.25:0,87,1261	0/0:37,0:37:99:0,108,1610	0/0:27,0:27:78.26:0,78,1191	0/0:23,0:23:60.20:0,60,913	0/0:35,0:35:99:0,105,1608	./.	1/1:1,3:3:2.72:19,3,0	./.	0/0:24,0:24:63.21:0,63,961	0/0:23,0:23:69.23:0,69,1056	0/0:30,0:30:90.26:0,90,1345	1/1:0,23:21:51.17:970,51,0	0/0:30,0:30:87.25:0,87,1268	./.	0/0:14,0:14:42.14:0,42,643
chr10	105031441	.	AACACAC	A	1519.85	PASS	AB=0.955;AC=9;AF=0.167;AN=54;BaseQRankSum=8.580;DP=784;FS=2.461;HRun=0;HaplotypeScore=160.4103;InbreedingCoeff=0.7503;MQ=59.44;MQ0=27;MQRankSum=-7.377;QD=16.17;ReadPosRankSum=-1.682;VQSLOD=3.2794;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:53:99:0,123,3742	0/1:20,1:21:4.66:5,0,1645	0/0:40,0:16:9.43:0,9,214	0/0:41,0:14:15.34:0,15,405	0/0:23,0:24:62.24:0,62,1964	1/1:6,12:18:23.68:518,24,0	1/1:3,16:17:15.05:324,15,0	0/0:18,0:12:18.63:0,19,117	0/0:32,0:33:81.22:0,81,2317	0/0:39,0:39:99:0,108,3281	0/0:25,0:26:63.18:0,63,1819	0/0:27,0:27:69.15:0,69,1996	0/0:44,0:45:99:0,117,3645	0/0:40,0:40:96.26:0,96,2877	0/0:30,0:33:84.25:0,84,2451	0/0:33,0:36:90.29:0,90,2713	0/0:40,0:40:99:0,102,3109	0/0:20,0:20:45.14:0,45,1290	1/1:13,0:5:0.81:42,1,0	0/0:10,0:5:2.13:0,2,4	0/0:13,0:11:1.19:0,1,3	0/0:29,0:29:69.22:0,69,2189	0/0:31,0:32:72.03:0,72,2077	0/0:34,0:35:86.30:0,86,2630	1/1:3,20:18:36.12:778,36,0	0/0:34,0:35:81.25:0,81,2387	./.	0/0:13,0:15:45.14:0,45,1266
chr10	105031468	.	ACG	A	234.80	PASS	AB=0.960;AC=9;AF=0.167;AN=54;BaseQRankSum=6.305;DP=714;FS=37.044;HRun=0;HaplotypeScore=103.4682;InbreedingCoeff=0.7936;MQ=58.00;MQ0=7;MQRankSum=-4.408;QD=3.91;ReadPosRankSum=-2.208;VQSLOD=0.4097;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,2224	0/0:18,0:18:51.09:0,51,886	0/0:38,0:19:53.88:0,54,936	0/1:22,0:15:30.57:31,0,432	0/0:23,0:23:60.13:0,60,1027	0/0:16,0:16:29.94:0,30,304	0/0:20,0:18:29.95:0,30,367	1/1:7,2:7:17.91:143,18,0	0/0:29,0:29:77.93:0,78,1181	0/0:43,0:43:99:0,126,2160	0/0:23,0:23:50.75:0,51,1003	0/0:25,0:24:69.15:0,69,1224	0/0:40,0:40:99:0,120,2194	0/0:34,0:33:73.31:0,73,1666	0/0:32,0:32:93.15:0,93,1565	0/0:37,0:37:99:0,111,1917	0/0:43,0:43:99:0,120,2079	0/0:22,0:21:60.16:0,60,1046	1/1:3,3:4:11.92:102,12,0	1/1:5,4:5:6:53,6,0	1/1:9,3:12:5.93:53,6,0	0/0:25,0:25:72.13:0,72,1218	0/0:24,0:24:60.20:0,60,1108	0/0:37,0:37:99:0,99,1720	0/0:25,0:20:49.48:0,49,506	0/0:34,0:34:99:0,99,1690	./.	0/0:18,0:18:54.09:0,54,873
chr10	105032389	.	AGT	A	174.88	PASS	AB=0.857;AC=5;AF=0.093;AN=54;BaseQRankSum=2.729;DP=409;FS=7.228;HRun=0;HaplotypeScore=60.3468;InbreedingCoeff=0.6267;MQ=58.22;MQ0=13;MQRankSum=-0.189;QD=5.83;ReadPosRankSum=0.100;VQSLOD=1.8027;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.06:0,75,1515	0/0:3,0:3:9.03:0,9,183	0/0:20,0:13:39.13:0,39,759	0/0:11,0:5:11.70:0,12,227	0/0:13,0:13:39.13:0,39,767	1/1:0,13:5:3.01:49,3,0	./.	0/0:26,1:23:69.24:0,69,1349	0/0:16,0:16:45.15:0,45,899	0/0:22,0:22:66.23:0,66,1342	0/0:15,0:15:45.15:0,45,890	0/0:10,0:10:30.10:0,30,596	0/0:9,0:9:27.09:0,27,534	0/0:13,0:13:39.12:0,39,731	0/0:11,0:11:33.10:0,33,635	0/0:13,0:13:39.13:0,39,780	0/0:16,0:16:45.13:0,45,874	0/0:27,0:27:81.24:0,81,1534	0/0:21,1:20:60.21:0,60,1197	0/1:5,1:2:42.89:43,0,55	0/0:12,1:12:30.10:0,30,609	0/0:8,0:8:21.07:0,21,414	0/0:6,0:6:18.06:0,18,366	0/0:4,0:4:12.04:0,12,244	1/1:0,11:4:12.04:196,12,0	0/0:25,0:25:72.25:0,72,1446	0/0:26,7:19:45.15:0,45,891	0/0:12,0:12:36.12:0,36,731
chr10	105032398	.	A	ATG	2920.11	PASS	AB=0.624;AC=7;AF=0.125;AN=56;BaseQRankSum=5.252;DP=417;FS=1.947;HRun=0;HaplotypeScore=50.2381;InbreedingCoeff=0.4359;MQ=57.33;MQ0=18;MQRankSum=-3.690;QD=24.13;ReadPosRankSum=0.719;VQSLOD=3.9453;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.11:0,78,1116	0/0:4,0:4:9.02:0,9,117	0/0:17,0:13:33.11:0,33,504	0/0:6,0:5:8.87:0,9,114	0/0:11,0:11:33.11:0,33,505	0/0:15,0:7:9.01:0,9,116	0/0:6,0:2:3.01:0,3,46	0/1:18,21:29:99:1027,0,281	0/0:16,0:16:39.13:0,39,595	0/0:20,0:20:60.20:0,60,899	0/0:14,0:14:42.13:0,42,623	0/0:8,0:8:24.08:0,24,367	0/0:9,0:9:27.08:0,27,392	0/0:8,0:8:24.08:0,24,366	0/0:11,0:11:33.10:0,33,484	0/0:10,0:10:30.10:0,30,459	0/0:18,0:18:45.13:0,45,666	0/0:21,0:21:63.21:0,63,964	0/1:8,15:19:40.72:714,0,41	0/1:3,5:3:48.68:49,0,82	1/1:4,10:13:24.08:463,24,0	0/0:8,0:8:24:0,24,315	0/0:6,0:6:18.06:0,18,276	0/0:4,0:4:12.04:0,12,184	0/0:16,0:8:21.06:0,21,301	0/0:27,0:27:75.24:0,75,1109	1/1:13,24:22:42.14:809,42,0	0/0:13,0:13:39.10:0,39,551
chr10	105032539	.	TG	T	579.66	PASS	AB=0.762;AC=6;AF=0.115;AN=52;BaseQRankSum=7.306;DP=426;FS=107.927;HRun=1;HaplotypeScore=61.3575;InbreedingCoeff=0.1984;MQ=45.96;MQ0=41;MQRankSum=-4.356;QD=5.74;ReadPosRankSum=-0.474;VQSLOD=-0.2287;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:92.98:0,93,1434	0/0:5,0:5:15.05:0,15,239	0/0:13,1:2:5.61:0,6,57	./.	0/0:13,0:13:21.07:0,21,335	./.	0/0:4,0:2:3.01:0,3,48	0/1:28,10:26:99:162,0,660	0/0:13,0:13:35.72:0,36,574	0/0:18,0:15:45.15:0,45,719	0/0:13,0:12:27.05:0,27,361	0/0:18,0:18:45.15:0,45,719	0/0:11,0:11:30.10:0,30,477	0/0:16,0:15:33.11:0,33,515	0/0:15,0:15:39.13:0,39,623	0/0:15,0:15:42.13:0,42,645	0/0:21,0:20:57.15:0,57,879	0/0:19,0:19:41.80:0,42,635	0/1:9,9:14:99:282,0,99	0/1:12,2:12:13.48:13,0,202	0/1:12,8:13:43.33:60,0,43	0/0:11,0:11:27.09:0,27,432	0/0:8,0:8:18.06:0,18,271	0/0:16,0:16:33.11:0,33,523	0/0:16,0:16:36.12:0,36,573	0/0:18,0:18:54.18:0,54,861	1/1:5,6:7:18.87:188,19,0	0/0:7,0:6:15.05:0,15,239
chr10	105032651	.	A	AC	537.61	PASS	AC=8;AF=0.167;AN=48;BaseQRankSum=6.404;DP=630;FS=0.000;HRun=0;HaplotypeScore=64.7264;InbreedingCoeff=0.8778;MQ=62.02;MQ0=7;MQRankSum=-6.364;QD=8.27;ReadPosRankSum=-1.372;VQSLOD=2.6139;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,1947	0/0:8,0:8:24.08:0,24,335	0/0:27,0:13:39.01:0,39,480	0/0:37,0:19:56.61:0,57,683	0/0:11,0:11:33.11:0,33,456	./.	./.	1/1:0,1:1:3.01:48,3,0	0/0:32,0:32:90.23:0,90,1222	0/0:25,0:25:75.25:0,75,1049	0/0:22,0:22:66.20:0,66,904	0/0:41,0:41:99:0,120,1677	0/0:23,0:23:69.20:0,69,942	0/0:38,0:38:99:0,108,1458	0/0:29,0:29:84.25:0,84,1140	0/0:33,0:33:93.30:0,93,1283	0/0:54,0:53:99:0,156,2118	0/0:29,0:29:87.26:0,87,1190	./.	1/1:1,18:15:6.02:95,6,0	./.	0/0:7,0:7:21.07:0,21,294	0/0:18,0:18:54.15:0,54,717	0/0:35,0:35:99:0,105,1466	1/1:1,0:9:5.99:50,6,0	0/0:31,0:31:93.31:0,93,1295	1/1:3,27:15:30.10:477,30,0	0/0:7,0:7:21.07:0,21,293
chr10	105032898	.	C	CAT	6251.30	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-1.725;DP=678;FS=28.017;HRun=0;HaplotypeScore=87.2479;InbreedingCoeff=0.9960;MQ=75.57;MQ0=0;MQRankSum=-1.939;QD=46.31;ReadPosRankSum=-1.430;VQSLOD=3.2797;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.29:0,84,1285	0/0:5,0:5:15.05:0,15,229	0/0:23,0:23:66.22:0,66,967	0/0:27,0:27:75.16:0,75,1012	0/0:20,0:20:60.20:0,60,917	0/0:28,0:25:51.17:0,51,776	0/0:22,0:22:51.17:0,51,771	1/1:1,28:29:84.26:1546,84,0	0/0:22,0:22:63.21:0,63,960	0/0:33,0:33:96.32:0,96,1451	0/0:13,0:13:36.12:0,36,550	0/0:29,0:29:84.24:0,84,1212	0/0:27,0:27:75.23:0,75,1125	0/0:33,0:33:96.27:0,96,1418	0/0:37,0:37:99:0,111,1678	0/0:31,0:31:93.32:0,93,1424	0/0:23,0:23:69.21:0,69,1026	0/0:13,0:13:30.10:0,30,459	1/1:3,19:21:60.20:1130,60,0	1/1:2,20:22:45.15:863,45,0	1/1:0,36:36:90.31:1737,90,0	0/0:19,0:19:57.18:0,57,843	0/0:18,0:18:51.17:0,51,780	0/0:27,0:27:78.23:0,78,1147	0/0:21,0:20:60.20:0,60,917	0/0:34,0:34:99:0,99,1490	1/1:2,23:24:51.17:976,51,0	0/0:10,0:10:30.10:0,30,459
chr10	105033920	.	G	GTA	312.04	PASS	AB=0.905;AC=11;AF=0.611;AN=18;BaseQRankSum=-0.673;DP=171;FS=0.000;HRun=0;HaplotypeScore=28.4632;MQ=77.86;MQ0=2;MQRankSum=0.000;QD=3.47;ReadPosRankSum=-1.345;VQSLOD=1.2453;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	1/1:22,0:21:2.50:6,2,0	./.	./.	./.	1/1:5,0:5:3.01:43,3,0	0/1:10,0:10:0:0,0,0	./.	0/1:7,0:7:0:0,0,0	./.	0/1:10,6:19:32.05:101,0,32	0/1:11,2:14:16.61:146,0,17	0/1:5,0:5:0:0,0,0	./.	0/0:5,0:5:0:0,0,0	./.	./.	./.	./.	./.	./.	1/1:4,4:8:6.02:90,6,0
chr10	105033965	.	CAGATATATAA	C	1849.38	PASS	AC=6;AF=0.120;AN=50;BaseQRankSum=5.699;DP=199;FS=23.473;HRun=0;HaplotypeScore=60.9580;InbreedingCoeff=0.7169;MQ=75.02;MQ0=5;MQRankSum=-4.488;QD=39.35;ReadPosRankSum=-0.019;VQSLOD=1.4093;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:15.05:0,15,721	0/0:2,0:2:6.02:0,6,296	0/0:14,0:9:15.35:0,15,587	0/0:26,0:12:9.03:0,9,263	0/0:5,0:5:15.05:0,15,785	0/0:4,0:4:12.04:0,12,591	0/0:7,0:7:21.07:0,21,1002	1/1:4,22:24:57.02:1291,57,0	0/0:4,0:4:12.04:0,12,523	0/0:4,0:4:12.04:0,12,596	0/0:4,0:4:12.04:0,12,533	0/0:2,0:2:6.02:0,6,314	0/0:4,0:4:9.03:0,9,378	0/0:6,0:6:18.06:0,18,873	0/0:2,0:2:3.01:0,3,123	0/0:4,0:4:12.04:0,12,624	0/0:12,0:12:24.04:0,24,1007	0/0:14,0:14:42.14:0,42,2041	./.	1/1:2,11:13:18.06:328,18,0	./.	0/0:7,0:7:21.07:0,21,949	0/0:2,0:2:6.02:0,6,314	./.	0/0:6,0:6:18.06:0,18,849	0/0:3,0:3:9.03:0,9,414	1/1:0,7:8:15.05:365,15,0	0/0:5,0:5:9.03:0,9,364
chr10	105034419	.	T	TAAAC	9193.69	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=5.654;DP=558;FS=5.164;HRun=0;HaplotypeScore=98.6313;InbreedingCoeff=0.9861;MQ=65.80;MQ0=1;MQRankSum=-12.562;QD=61.70;ReadPosRankSum=-1.449;VQSLOD=6.1639;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,2211	0/0:8,0:8:24.08:0,24,455	0/0:11,0:11:33.03:0,33,567	0/0:8,0:8:24.08:0,24,402	0/0:19,0:19:51.04:0,51,789	1/1:3,23:26:75.24:1882,75,0	1/1:5,17:21:60.19:1443,60,0	1/1:7,7:11:27.07:624,27,0	0/0:16,0:16:48.16:0,48,902	0/0:30,0:30:81.26:0,81,1445	0/0:29,0:29:78.27:0,78,1438	0/0:18,0:18:51.17:0,51,952	0/0:15,0:15:42.14:0,42,787	0/0:22,0:22:63.20:0,63,1156	0/0:25,0:25:60.21:0,60,1139	0/0:25,0:25:75.22:0,75,1340	0/0:22,0:22:60.18:0,60,1104	0/0:13,0:13:33.11:0,33,626	1/1:5,4:7:15.50:347,16,0	1/1:6,21:25:69.19:1634,69,0	1/1:4,3:5:9:184,9,0	0/0:24,0:24:69.21:0,69,1231	0/0:31,0:31:87.27:0,87,1585	0/0:25,0:25:75.21:0,75,1376	1/1:4,16:20:57.19:1445,57,0	0/0:17,0:17:45.15:0,45,837	1/1:7,17:24:66.23:1635,66,0	0/0:7,0:7:21.04:0,21,333
chr10	105034431	.	CA	C	1329.01	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.457;DP=549;FS=5.177;HRun=8;HaplotypeScore=89.7579;InbreedingCoeff=0.9882;MQ=67.44;MQ0=0;MQRankSum=-10.140;QD=22.15;ReadPosRankSum=1.830;VQSLOD=4.0178;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,111,1319	0/0:9,0:9:21.04:0,21,239	0/0:14,0:14:16.77:0,17,278	0/0:9,0:9:21.03:0,21,254	0/0:16,0:16:45.12:0,45,522	1/1:3,20:23:60.09:579,60,0	1/1:2,16:17:45.07:433,45,0	0/0:19,0:17:48.15:0,48,580	0/0:17,0:17:48.15:0,48,580	0/0:29,0:29:81.24:0,81,967	0/0:25,0:25:72.22:0,72,870	0/0:17,0:17:51.16:0,51,616	0/0:16,0:16:48.13:0,48,568	0/0:21,0:21:60.17:0,60,714	0/0:22,0:22:60.18:0,60,725	0/0:23,0:23:60.17:0,60,714	0/0:22,0:22:63.15:0,63,726	0/0:14,0:14:39.12:0,39,467	0/0:10,0:9:24.06:0,24,277	0/0:26,0:25:69.08:0,69,811	0/0:6,0:6:18:0,18,189	0/0:21,0:21:60.18:0,60,715	0/0:28,0:28:75.23:0,75,906	0/0:28,0:28:84.24:0,84,1002	1/1:0,19:19:48.07:460,48,0	0/0:20,0:20:60.17:0,60,713	0/0:25,0:25:66.15:0,66,760	0/0:7,0:7:21.06:0,21,254
chr10	105034466	.	GT	G	2574.46	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.176;DP=606;FS=4.297;HRun=1;HaplotypeScore=77.9513;InbreedingCoeff=0.9983;MQ=62.75;MQ0=4;MQRankSum=-2.754;QD=26.27;ReadPosRankSum=-2.451;VQSLOD=2.8513;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1746	0/0:12,0:12:36.11:0,36,552	0/0:28,0:24:59.10:0,59,923	0/0:11,0:11:33.10:0,33,487	0/0:21,0:21:60.19:0,60,909	0/0:20,0:20:25.47:0,25,263	0/0:15,0:15:23.75:0,24,229	1/1:0,30:21:48.09:598,48,0	0/0:17,0:17:51.17:0,51,810	0/0:24,0:24:66.21:0,66,1023	0/0:30,0:30:90.29:0,90,1406	0/0:14,0:14:42.14:0,42,671	0/0:22,0:22:66.23:0,66,1052	0/0:22,0:22:66.23:0,66,1054	0/0:23,0:23:69.24:0,69,1102	0/0:20,0:20:57.18:0,57,886	0/0:18,0:18:51.15:0,51,789	0/0:15,0:15:45.15:0,45,711	1/1:0,10:8:24.05:287,24,0	1/1:3,19:19:48.04:617,48,0	1/1:1,10:9:27.09:377,27,0	0/0:29,0:29:87.28:0,87,1351	0/0:25,0:25:72.18:0,72,1056	0/0:32,0:32:93.26:0,93,1485	0/0:24,0:24:50.92:0,51,313	0/0:31,0:31:93.31:0,93,1460	1/1:1,24:22:63.21:871,63,0	0/0:17,0:17:51.17:0,51,815
chr10	105035348	.	C	CA	5855.56	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.665;DP=755;FS=11.492;HRun=0;HaplotypeScore=91.0432;InbreedingCoeff=0.9986;MQ=69.28;MQ0=0;MQRankSum=-4.977;QD=42.43;ReadPosRankSum=-1.516;VQSLOD=3.6734;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1702	0/0:8,0:8:24.08:0,24,336	0/0:22,0:21:58.42:0,58,773	0/0:19,0:19:48.13:0,48,599	0/0:23,0:23:66.19:0,66,887	0/0:23,0:23:66.22:0,66,922	0/0:26,0:25:72.22:0,72,988	1/1:4,21:25:69.21:1046,69,0	0/0:32,0:32:96.32:0,96,1343	0/0:32,0:32:96.31:0,96,1327	0/0:25,0:25:72.23:0,72,987	0/0:30,0:30:90.27:0,90,1239	0/0:39,0:39:99:0,117,1616	0/0:34,0:34:99:0,99,1366	0/0:27,0:27:81.27:0,81,1131	0/0:23,0:23:69.23:0,69,965	0/0:43,0:43:99:0,129,1788	0/0:22,0:22:66.22:0,66,920	1/1:2,17:18:51.15:787,51,0	1/1:2,23:24:63.21:1007,63,0	1/1:0,37:37:99:1679,105,0	0/0:24,0:24:69.22:0,69,946	0/0:23,0:23:66.22:0,66,923	0/0:34,0:34:99:0,99,1352	0/0:33,0:33:84.21:0,84,1118	0/0:26,0:26:78.24:0,78,1046	1/1:2,29:32:84.29:1337,84,0	0/0:7,0:7:21.07:0,21,294
chr10	105035433	.	C	CA	2413.22	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.033;DP=733;FS=9.331;HRun=5;HaplotypeScore=92.9795;InbreedingCoeff=0.9991;MQ=73.79;MQ0=1;MQRankSum=-2.116;QD=29.79;ReadPosRankSum=1.642;VQSLOD=3.6486;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,129,1367	0/0:9,0:9:24.04:0,24,247	0/0:22,0:22:63.07:0,63,639	0/0:21,0:21:37.28:0,37,367	0/0:40,0:40:99:0,111,1160	1/1:0,27:27:78.25:1026,78,0	1/1:1,21:21:38.63:583,39,0	0/0:26,0:26:69.16:0,69,736	0/0:24,0:24:66.15:0,66,703	0/0:29,0:29:84.17:0,84,890	0/0:35,0:35:99:0,102,1085	0/0:19,0:19:57.13:0,57,604	0/0:24,0:24:63.12:0,63,664	0/0:32,0:32:90.22:0,90,967	0/0:20,0:20:60.15:0,60,645	0/0:25,0:25:72.18:0,72,774	0/0:26,0:26:60.12:0,60,634	0/0:14,0:14:39.10:0,39,419	0/0:29,0:29:81.19:0,81,864	0/0:36,0:36:93.23:0,93,999	0/0:15,0:15:33.08:0,33,355	0/0:26,0:26:78.14:0,78,807	0/0:19,0:19:51.08:0,51,525	0/0:31,0:31:84.21:0,84,902	1/1:3,29:32:72.23:947,72,0	0/0:22,0:22:60.15:0,60,645	0/0:42,0:42:99:0,123,1313	0/0:19,0:19:57.14:0,57,612
chr10	105035587	.	AC	A	4358.24	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.521;DP=706;FS=0.769;HRun=3;HaplotypeScore=73.0200;InbreedingCoeff=0.9990;MQ=64.53;MQ0=2;MQRankSum=0.010;QD=33.27;ReadPosRankSum=-0.982;VQSLOD=4.7281;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1548	0/0:12,0:12:36.11:0,36,502	0/0:19,0:15:39.13:0,39,557	0/0:26,0:18:45.12:0,45,602	0/0:32,0:32:87.28:0,87,1231	0/0:23,0:23:63.20:0,63,888	0/0:31,0:31:93.22:0,93,1286	1/1:2,24:26:72.17:874,72,0	0/0:25,0:25:69.23:0,69,993	0/0:30,0:30:90.30:0,90,1295	0/0:21,0:21:60.20:0,60,861	0/0:24,0:24:69.22:0,69,973	0/0:24,0:24:72.24:0,72,1036	0/0:28,0:28:81.27:0,81,1164	0/0:30,0:30:81.27:0,81,1163	0/0:26,0:26:78.26:0,78,1123	0/0:27,0:27:80.84:0,81,1111	0/0:19,0:19:54.10:0,54,725	1/1:3,21:23:63.17:755,63,0	1/1:0,29:28:78.21:947,78,0	1/1:0,31:31:84.26:1041,84,0	0/0:30,0:30:87.24:0,87,1206	0/0:22,0:22:66.15:0,66,911	0/0:28,0:28:82.52:0,83,1166	0/0:25,0:25:66.22:0,66,948	0/0:27,0:27:81.22:0,81,1126	1/1:1,20:21:60.19:742,60,0	0/0:7,0:7:21.07:0,21,302
chr10	105035938	.	C	CA	2104.97	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=3.557;DP=566;FS=13.343;HRun=9;HaplotypeScore=68.0206;InbreedingCoeff=0.9876;MQ=70.71;MQ0=0;MQRankSum=0.334;QD=21.48;ReadPosRankSum=-0.658;VQSLOD=3.0013;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,1:36:58.83:0,59,728	0/0:7,0:7:21:0,21,182	0/0:12,0:11:29.98:0,30,256	0/0:20,1:18:20.94:0,21,165	0/0:38,1:39:65.78:0,66,800	0/0:26,0:26:71:0,71,601	0/0:13,0:13:38.99:0,39,339	1/1:6,18:21:42.06:442,42,0	0/0:19,0:19:47.97:0,48,417	0/0:33,0:33:80.95:0,81,699	0/0:24,0:24:59.96:0,60,521	0/0:13,0:13:29.98:0,30,260	0/0:10,0:12:25.03:0,25,189	0/0:22,0:22:62.95:0,63,541	0/0:21,0:21:59.98:0,60,521	0/0:11,0:11:32.99:0,33,287	0/0:27,0:27:71.97:0,72,625	0/0:16,0:15:41.94:0,42,353	1/1:3,7:10:24.03:247,24,0	1/1:4,28:32:78.21:863,78,0	1/1:0,5:5:12.03:133,12,0	0/0:13,0:13:35.99:0,36,313	0/0:23,0:23:62.98:0,63,547	0/0:13,0:13:29.98:0,30,260	0/0:28,0:28:71.98:0,72,625	0/0:30,0:30:77.94:0,78,677	1/1:6,20:25:54.01:594,54,0	0/0:7,0:7:17.99:0,18,156
chr10	105036057	.	A	AGG	4374.68	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.847;DP=580;FS=10.616;HRun=5;HaplotypeScore=78.9959;InbreedingCoeff=0.9638;MQ=65.29;MQ0=1;MQRankSum=-3.092;QD=32.89;ReadPosRankSum=2.682;VQSLOD=3.6737;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1415	0/0:7,0:7:21.07:0,21,292	0/0:18,0:17:48.09:0,48,610	0/0:25,0:25:69.10:0,69,860	0/0:27,0:27:75.23:0,75,1026	1/1:1,21:21:45.15:825,45,0	1/1:3,14:18:12.19:581,12,0	1/1:3,8:7:8.99:129,9,0	0/0:17,0:17:48.15:0,48,653	0/0:26,0:26:78.26:0,78,1086	0/0:13,0:13:39.13:0,39,545	0/0:17,0:17:51.17:0,51,714	0/0:23,0:23:63.19:0,63,851	0/0:17,0:17:51.16:0,51,694	0/0:28,0:28:78.25:0,78,1072	0/0:25,0:25:75.25:0,75,1050	0/0:28,0:28:78.25:0,78,1074	0/0:29,0:29:84.28:0,84,1171	1/1:2,5:4:6.02:110,6,0	1/1:2,10:10:15.05:275,15,0	1/1:2,16:13:33.11:605,33,0	0/0:15,0:15:45.13:0,45,609	0/0:22,0:22:63.20:0,63,864	0/0:39,0:39:99:0,105,1419	1/1:1,19:20:48.16:863,48,0	0/0:21,0:21:60.18:0,60,819	1/1:2,23:23:54.19:988,54,0	0/0:13,0:13:36.12:0,36,503
chr10	105036151	.	TGA	T	842.52	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.926;DP=629;FS=15.141;HRun=0;HaplotypeScore=96.7281;InbreedingCoeff=0.9964;MQ=64.83;MQ0=1;MQRankSum=-4.121;QD=26.33;ReadPosRankSum=1.343;VQSLOD=3.9966;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,2100	0/0:11,0:11:30.10:0,30,561	0/0:28,0:24:66.19:0,66,1141	0/0:35,0:33:84.15:0,84,1480	0/0:30,0:30:90.29:0,90,1645	1/1:4,11:13:24.08:352,24,0	1/1:0,7:7:20.94:279,21,0	0/0:27,0:26:78.25:0,78,1410	0/0:21,0:21:63.20:0,63,1149	0/0:23,0:23:69.24:0,69,1288	0/0:12,0:12:36.12:0,36,665	0/0:26,0:26:78.25:0,78,1429	0/0:26,0:26:78.25:0,78,1418	0/0:25,0:25:75.24:0,75,1366	0/0:36,0:36:99:0,105,1928	0/0:27,0:27:81.28:0,81,1517	0/0:27,0:27:75.26:0,75,1404	0/0:22,0:22:63.20:0,63,1148	0/0:16,0:15:42.14:0,42,783	0/0:19,0:19:54.19:0,54,1008	0/0:34,0:30:74.27:0,74,1316	0/0:9,0:9:27.09:0,27,505	0/0:23,0:23:69.24:0,69,1292	0/0:26,0:26:75.24:0,75,1344	1/1:0,10:10:24.08:352,24,0	0/0:20,0:20:60.21:0,60,1119	0/0:23,0:20:36.12:0,36,672	0/0:12,0:12:36.07:0,36,597
chr10	105036177	.	T	TTGTC	5288.88	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.591;DP=676;FS=6.449;HRun=0;HaplotypeScore=116.5596;InbreedingCoeff=0.9851;MQ=65.59;MQ0=0;MQRankSum=-9.197;QD=34.80;ReadPosRankSum=-2.954;VQSLOD=4.1392;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,105,1682	0/0:8,0:8:21.06:0,21,334	0/0:33,0:31:42.03:0,42,700	0/0:25,0:23:41.32:0,41,605	0/0:36,0:36:90.29:0,90,1472	1/1:9,9:16:33.11:737,33,0	1/1:9,4:13:18.05:322,18,0	1/1:8,4:12:15.02:191,15,0	0/0:24,0:24:63.21:0,63,1039	0/0:24,0:24:63.20:0,63,1027	0/0:16,0:16:42.10:0,42,679	0/0:30,0:30:75.26:0,75,1274	0/0:30,0:30:90.25:0,90,1450	0/0:27,0:27:72.22:0,72,1155	0/0:35,0:35:93.28:0,93,1478	0/0:35,0:35:90.29:0,90,1470	0/0:22,0:22:45.15:0,45,767	0/0:32,0:32:87.03:0,87,1483	1/1:6,6:11:15.04:327,15,0	1/1:2,20:24:60.16:1371,60,0	1/1:15,19:35:45.15:978,45,0	0/0:13,0:13:33.10:0,33,536	0/0:29,0:29:75.24:0,75,1230	0/0:21,0:21:57.18:0,57,930	1/1:3,10:13:27.09:614,27,0	0/0:29,0:29:71.97:0,72,1153	1/1:10,11:21:30.10:748,30,0	0/0:12,0:12:10.51:0,11,435
chr10	105036672	.	ACT	A	1484.64	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.485;DP=725;FS=2.889;HRun=0;HaplotypeScore=107.7518;InbreedingCoeff=0.9984;MQ=59.99;MQ0=7;MQRankSum=-3.753;QD=26.99;ReadPosRankSum=1.160;VQSLOD=4.6431;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,141,2510	0/0:8,0:8:24.06:0,24,387	0/0:34,0:28:70.39:0,70,1183	0/0:33,0:29:72.47:0,72,1159	0/0:23,0:21:48.16:0,48,859	1/1:0,19:17:30.10:428,30,0	1/1:3,19:22:54.18:771,54,0	0/0:36,0:29:84.29:0,84,1527	0/0:23,0:23:66.23:0,66,1195	0/0:23,0:23:63.21:0,63,1120	0/0:16,0:16:30.01:0,30,547	0/0:26,0:26:72.24:0,72,1289	0/0:39,0:39:96.31:0,96,1697	0/0:25,0:25:63.20:0,63,1110	0/0:39,0:39:99:0,111,1985	0/0:29,0:29:81.26:0,81,1445	0/0:41,0:41:99:0,120,2117	0/0:30,0:29:84.21:0,84,1440	0/0:22,0:19:54.19:0,54,988	0/0:22,0:23:60.20:0,60,1040	0/0:30,0:29:66.23:0,66,1181	0/0:16,0:16:42.14:0,42,768	0/0:17,0:17:42.13:0,42,738	0/0:24,0:24:69.20:0,69,1181	1/1:1,13:13:33.04:428,33,0	0/0:20,0:20:57.20:0,57,1039	0/0:27,0:27:63.16:0,63,1085	0/0:12,0:12:27.09:0,27,482
chr10	105036734	.	G	GA	2035.13	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.897;DP=631;FS=0.000;HRun=1;HaplotypeScore=83.9486;InbreedingCoeff=0.9516;MQ=69.36;MQ0=8;MQRankSum=-7.271;QD=27.14;ReadPosRankSum=-1.124;VQSLOD=3.1175;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:64:99:0,163,2103	0/0:9,0:9:21.03:0,21,254	0/0:35,0:35:93.27:0,93,1180	0/0:24,0:23:62.84:0,63,743	0/0:22,0:22:63.20:0,63,814	0/0:13,0:11:21.07:0,21,272	0/0:10,0:8:6.02:0,6,78	1/1:1,9:9:24.07:334,24,0	0/0:26,0:26:78.25:0,78,1011	0/0:27,0:27:72.21:0,72,908	0/0:14,0:14:36.12:0,36,467	0/0:30,0:30:84.27:0,84,1090	0/0:27,0:27:72.22:0,72,920	0/0:25,0:25:69.22:0,69,895	0/0:31,0:31:90.29:0,90,1167	0/0:34,0:34:96.30:0,96,1231	0/0:46,0:46:99:0,126,1636	0/0:25,0:24:75.24:0,75,974	1/1:6,11:15:40.64:551,41,0	1/1:1,7:6:12.04:179,12,0	1/1:1,17:17:30.10:436,30,0	0/0:14,0:14:42.14:0,42,544	0/0:14,0:14:36.10:0,36,451	0/0:26,0:26:66.21:0,66,857	0/0:15,0:8:9.03:0,9,117	0/0:19,0:19:51.17:0,51,662	1/1:3,19:22:51.12:707,51,0	0/0:6,0:6:18.06:0,18,234
chr10	105038003	.	T	TTAAAAA	196.29	PASS	AB=0.940;AC=5;AF=0.278;AN=18;BaseQRankSum=0.453;DP=642;FS=0.000;HRun=0;HaplotypeScore=27.9476;MQ=7.65;MQ0=584;MQRankSum=0.711;QD=2.04;ReadPosRankSum=-1.681;VQSLOD=0.9270;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/1:8,0:1:0:0,0,0	./.	./.	0/1:48,3:21:73.15:73,0,495	./.	./.	./.	./.	0/0:16,0:7:21.07:0,21,531	0/0:11,0:2:6.02:0,6,112	./.	./.	./.	./.	./.	./.	./.	./.	0/0:19,0:2:3:0,3,38	./.	0/1:12,2:4:99:101,0,142	1/1:21,2:3:3.01:105,3,0	./.	./.	0/0:26,0:3:9.03:0,9,227	./.	0/0:13,0:4:12.04:0,12,303
chr10	105043402	.	ATT	A	2571.84	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.775;DP=600;FS=10.778;HRun=5;HaplotypeScore=87.4398;InbreedingCoeff=0.9995;MQ=71.78;MQ0=1;MQRankSum=-7.814;QD=29.23;ReadPosRankSum=-1.529;VQSLOD=2.0066;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,166,3006	0/0:14,0:14:42.14:0,42,759	0/0:27,0:24:69.21:0,69,1155	0/0:24,1:25:48.25:0,48,1058	0/0:23,0:23:57.20:0,57,1036	0/0:15,0:15:45.15:0,45,812	0/0:24,0:24:63.20:0,63,1119	1/1:1,19:17:36.12:504,36,0	0/0:21,0:21:63.20:0,63,1120	0/0:22,0:22:66.23:0,66,1210	0/0:15,0:15:39.13:0,39,715	0/0:19,0:19:57.20:0,57,1045	0/0:25,0:25:75.25:0,75,1345	0/0:20,0:20:60.21:0,60,1095	0/0:23,0:23:66.23:0,66,1208	0/0:17,0:17:51.17:0,51,935	0/0:28,0:28:84.27:0,84,1491	0/0:19,0:19:57.19:0,57,1001	1/1:0,9:9:27.09:377,27,0	1/1:0,24:23:57.15:775,57,0	1/1:0,17:16:30.10:420,30,0	0/0:22,0:22:63.19:0,63,1095	0/0:11,0:11:33.11:0,33,596	0/0:22,0:22:63.22:0,63,1155	0/0:24,0:24:69.06:0,69,1097	0/0:24,0:24:72.25:0,72,1320	1/1:0,18:17:48.16:671,48,0	0/0:17,0:17:42.14:0,42,770
chr10	105043801	.	G	GCA	8426.65	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-1.857;DP=966;FS=0.312;HRun=0;HaplotypeScore=123.5302;InbreedingCoeff=0.9991;MQ=66.28;MQ0=0;MQRankSum=-1.526;QD=43.89;ReadPosRankSum=-1.176;VQSLOD=5.4299;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,105,1456	0/0:20,0:20:57.19:0,57,768	0/0:24,0:23:63.16:0,63,797	0/0:25,0:23:24.65:0,25,542	0/0:31,0:31:84.18:0,84,1080	0/0:33,0:33:93.31:0,93,1255	0/0:40,0:40:99:0,114,1538	1/1:4,41:46:99:2034,120,0	0/0:44,0:44:99:0,132,1716	0/0:43,0:43:99:0,123,1648	0/0:17,0:17:42.10:0,42,547	0/0:59,0:59:99:0,166,2214	0/0:55,0:55:99:0,144,1929	0/0:39,0:39:99:0,111,1484	0/0:62,0:62:99:0,172,2294	0/0:37,0:37:99:0,105,1397	0/0:19,0:19:57.19:0,57,768	0/0:15,0:15:39.13:0,39,524	1/1:3,18:22:57.19:977,57,0	1/1:0,19:19:51.17:893,51,0	1/1:6,71:78:99:3472,199,0	0/0:30,0:30:78.26:0,78,1054	0/0:27,0:27:72.18:0,72,937	0/0:32,0:32:84.25:0,84,1103	0/0:29,0:29:75.25:0,75,1014	0/0:41,0:41:99:0,99,1305	1/1:4,22:26:60.21:1051,60,0	0/0:8,0:8:24.08:0,24,325
chr10	105044692	.	CATCA	C	845.11	PASS	AC=6;AF=0.130;AN=46;BaseQRankSum=5.256;DP=498;FS=31.487;HRun=0;HaplotypeScore=103.5144;InbreedingCoeff=0.9570;MQ=72.83;MQ0=3;MQRankSum=-3.798;QD=24.86;ReadPosRankSum=-0.474;VQSLOD=1.2790;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:95.99:0,96,2636	0/0:11,0:11:30.10:0,30,811	0/0:25,0:17:51.18:0,51,1407	0/0:34,0:17:44.89:0,45,1175	0/0:16,0:16:42.14:0,42,1072	1/1:3,12:10:24.08:457,24,0	1/1:3,7:9:21.07:398,21,0	./.	0/0:21,0:21:60.16:0,60,1520	0/0:22,0:22:66.23:0,66,1773	0/0:23,0:23:54.19:0,54,1454	0/0:22,0:22:48.15:0,48,1262	0/0:17,0:17:23.49:0,23,549	0/0:17,0:17:35.86:0,36,972	0/0:28,0:28:53.87:0,54,1447	0/0:20,0:20:45.06:0,45,1258	0/0:31,0:31:78.25:0,78,2120	0/0:20,0:20:48.16:0,48,1332	./.	./.	./.	0/0:25,0:25:66.23:0,66,1692	0/0:24,0:24:54.17:0,54,1440	0/0:29,0:29:84.25:0,84,2253	1/1:5,4:6:6.02:120,6,0	0/0:24,0:24:69.22:0,69,1779	./.	0/0:16,0:16:45.15:0,45,1258
chr10	105044721	.	TA	T	358.66	PASS	AB=0.927;AC=9;AF=0.196;AN=46;BaseQRankSum=7.670;DP=439;FS=0.000;HRun=10;HaplotypeScore=71.4558;InbreedingCoeff=0.5491;MQ=66.13;MQ0=0;MQRankSum=-0.724;QD=4.27;ReadPosRankSum=-1.474;VQSLOD=0.1805;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:37:61.17:0,61,884	0/0:10,0:10:21.02:0,21,219	0/1:12,1:7:13.45:13,0,50	0/1:15,0:15:38.78:39,0,104	0/1:17,2:19:4.01:4,0,350	1/1:2,12:10:20.79:169,21,0	1/1:3,8:11:11.08:157,11,0	./.	0/0:20,1:21:18.88:0,19,384	0/0:24,0:24:53.49:0,53,557	0/0:24,0:24:56.90:0,57,568	0/0:18,0:18:26.62:0,27,355	0/0:14,0:14:17.86:0,18,184	0/0:18,0:18:41.92:0,42,452	0/0:31,0:31:69.06:0,69,714	0/0:21,0:22:38.14:0,38,457	0/0:26,1:27:40.18:0,40,661	0/0:19,1:20:22.07:0,22,460	./.	./.	./.	0/0:15,1:16:1.04:0,1,238	0/0:19,0:19:35.91:0,36,343	0/0:24,0:24:60.13:0,60,645	1/1:2,8:10:14.87:119,15,0	0/0:21,0:21:51.12:0,51,549	./.	0/0:9,0:9:21.06:0,21,232
chr10	105044826	.	CT	C	556.53	PASS	AB=0.804;AC=7;AF=0.152;AN=46;BaseQRankSum=3.365;DP=447;FS=0.000;HRun=12;HaplotypeScore=61.1918;InbreedingCoeff=0.5904;MQ=60.69;MQ0=4;MQRankSum=-2.816;QD=6.25;ReadPosRankSum=1.531;VQSLOD=1.7653;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:48.02:0,48,459	0/0:0,0:7:14.17:0,14,77	0/0:8,0:6:11.97:0,12,104	0/1:13,1:11:15.40:15,0,26	0/0:20,0:21:38.83:0,39,356	1/1:7,15:20:29.86:232,30,0	1/1:4,18:21:32.85:255,33,0	./.	0/0:14,1:15:26.99:0,27,249	0/0:25,1:25:60.11:0,60,603	0/0:18,0:18:23.45:0,23,322	0/0:20,0:21:14.11:0,14,291	0/0:19,2:21:24.55:0,25,410	0/1:8,1:9:8.14:8,0,106	0/0:32,0:33:71.93:0,72,696	0/0:21,1:21:12.82:0,13,306	0/0:25,0:26:30.06:0,30,304	0/0:30,0:29:66.03:0,66,649	./.	./.	./.	0/0:13,0:13:21.04:0,21,213	0/0:17,0:17:30.02:0,30,294	0/0:19,0:19:39.06:0,39,388	0/1:6,16:19:0.55:179,0,1	0/0:24,1:25:36.86:0,37,543	./.	0/0:12,0:12:27.05:0,27,273
chr10	105047102	.	T	TGGGGG	160.81	PASS	AB=0.946;AC=6;AF=0.130;AN=46;BaseQRankSum=4.151;DP=611;FS=18.957;HRun=4;HaplotypeScore=108.7486;InbreedingCoeff=0.1144;MQ=50.20;MQ0=59;MQRankSum=-3.090;QD=1.73;ReadPosRankSum=0.264;VQSLOD=-0.5938;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,102,1971	0/0:10,1:9:27.09:0,27,522	./.	0/0:32,0:4:6.02:0,6,115	0/0:21,0:19:36.10:0,36,629	0/0:26,0:26:51.15:0,51,945	0/0:34,0:31:78.26:0,78,1496	./.	0/0:34,0:34:90.30:0,90,1739	0/0:26,0:20:57.20:0,57,1102	0/1:17,2:13:59.10:59,0,546	0/0:23,0:23:60.20:0,60,1159	0/0:17,0:16:48.16:0,48,928	0/0:23,0:23:66.21:0,66,1243	0/0:22,0:22:66.23:0,66,1275	0/0:29,0:29:75.25:0,75,1450	0/0:39,0:39:87.36:0,87,2015	0/0:19,0:19:51.15:0,51,951	./.	1/1:3,2:2:3.01:92,3,0	./.	0/0:37,0:36:72.23:0,72,1387	0/1:22,2:18:53.62:54,0,654	0/0:26,0:26:78.27:0,78,1508	0/0:22,0:18:42.14:0,42,812	0/1:24,0:23:23.90:24,0,1097	./.	0/1:20,1:21:47.74:48,0,767
chr10	105047426	.	C	CT	6184.54	PASS	AB=0.748;AC=29;AF=0.537;AN=54;BaseQRankSum=6.433;DP=872;FS=133.262;HRun=6;HaplotypeScore=81.6521;InbreedingCoeff=-0.6075;MQ=42.81;MQ0=36;MQRankSum=-11.960;QD=7.34;ReadPosRankSum=4.968;VQSLOD=0.2892;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,32:44:99:792,0,282	0/1:10,6:13:42.33:42,0,242	0/0:10,0:2:6.01:0,6,61	0/0:14,0:2:6:0,6,56	0/1:28,11:35:98.34:98,0,675	0/1:17,8:24:99:163,0,396	0/1:21,4:23:93.69:94,0,402	./.	0/1:18,6:24:99:134,0,337	0/1:31,14:38:99:156,0,775	0/1:13,19:26:99:320,0,218	0/1:27,11:36:99:113,0,537	0/1:28,8:32:97.86:98,0,592	0/1:22,9:27:46.97:47,0,515	0/1:22,11:30:99:157,0,451	0/1:23,13:34:99:255,0,497	0/1:38,38:71:99:957,0,673	0/1:32,15:44:99:421,0,542	1/1:1,7:5:15.05:189,15,0	1/1:2,11:7:21.07:264,21,0	1/1:4,13:13:39.12:491,39,0	0/1:37,18:50:99:219,0,828	0/1:28,15:39:99:168,0,669	0/1:32,13:44:99:162,0,722	0/1:19,20:34:99:368,0,405	0/1:24,10:30:99:249,0,553	1/1:0,7:5:9.03:113,9,0	0/1:21,7:27:99:114,0,513
chr10	105050037	.	CATATACACCCAA	C	673.53	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=5.212;DP=444;FS=26.069;HRun=0;HaplotypeScore=145.5156;InbreedingCoeff=0.8282;MQ=67.58;MQ0=2;MQRankSum=-3.991;QD=39.62;ReadPosRankSum=-0.657;VQSLOD=1.2934;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.22:0,69,3210	0/0:4,0:3:8.92:0,9,234	0/0:44,0:28:77.45:0,77,3595	0/0:34,0:20:52.49:0,52,2060	0/0:18,0:18:24.55:0,25,1104	0/0:10,0:10:9.03:0,9,455	0/0:27,0:26:64.44:0,64,2597	1/1:0,10:10:27.98:502,28,0	0/0:8,0:8:18.06:0,18,996	0/0:9,0:9:27.09:0,27,1206	0/0:11,0:11:18.06:0,18,787	0/0:16,0:16:27.56:0,28,1587	0/0:16,0:15:42.14:0,42,2004	0/0:14,0:13:33.11:0,33,1580	0/0:16,0:16:33.11:0,33,1717	0/0:19,0:19:45.05:0,45,2271	0/0:20,0:20:47.15:0,47,1815	0/0:23,0:22:60.21:0,60,2868	./.	1/1:2,0:2:3.01:67,3,0	0/0:17,0:15:0.47:0,0,1	0/0:15,0:14:18.15:0,18,1038	0/0:10,0:10:21.54:0,22,905	0/0:37,0:37:99:0,105,5270	0/0:12,0:12:22.32:0,22,783	0/0:13,0:13:39.13:0,39,1933	1/1:5,0:5:13.53:232,14,0	0/0:6,0:6:15.05:0,15,769
chr10	105050059	.	G	GAC	362.60	PASS	AB=0.929;AC=20;AF=0.417;AN=48;BaseQRankSum=0.719;DP=555;FS=6.268;HRun=0;HaplotypeScore=105.7011;InbreedingCoeff=0.0678;MQ=51.03;MQ0=25;MQRankSum=-0.406;QD=1.56;ReadPosRankSum=-3.918;VQSLOD=-0.2415;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:39:2.84:0,3,14	0/1:4,0:5:6.26:14,0,6	./.	./.	0/0:17,0:16:12.03:0,12,128	1/1:5,8:13:5.05:50,5,0	1/1:29,0:28:2.50:7,2,0	1/1:19,0:19:0.47:1,0,0	0/1:11,2:13:21.75:22,0,155	0/1:11,0:10:0.47:1,0,0	./.	0/0:14,0:19:11.65:0,12,108	0/1:18,0:18:2.67:3,0,119	0/1:18,0:18:11.17:11,0,16	0/0:25,0:26:21.82:0,22,242	0/0:26,0:26:10.15:0,10,370	0/1:13,9:23:49.26:117,0,49	0/0:24,0:26:8.75:0,9,188	1/1:6,0:6:5.11:26,5,0	./.	0/1:29,0:24:11.38:62,0,11	0/0:13,0:12:5.40:0,5,41	0/0:7,0:7:2.96:0,3,20	0/0:38,0:38:29.65:0,30,207	0/1:13,0:13:0:0,0,0	0/1:10,5:16:16.67:97,0,17	1/1:12,0:11:2.10:18,2,0	0/1:5,0:5:20.33:68,0,20
chr10	105050383	.	GCA	G	3894.60	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=15.281;DP=669;FS=2.283;HRun=0;HaplotypeScore=105.4550;InbreedingCoeff=0.9993;MQ=60.04;MQ0=1;MQRankSum=-5.873;QD=30.91;ReadPosRankSum=1.234;VQSLOD=5.7716;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,151,3046	0/0:15,0:15:42.14:0,42,845	0/0:17,0:11:30.05:0,30,533	0/0:12,0:8:24.08:0,24,471	0/0:28,0:28:81.28:0,81,1644	0/0:22,0:22:66.23:0,66,1341	0/0:28,0:28:84.29:0,84,1684	1/1:4,22:26:69.14:804,69,0	0/0:14,0:14:42.14:0,42,853	0/0:22,0:22:66.23:0,66,1341	0/0:20,0:19:51.17:0,51,1019	0/0:24,0:24:72.25:0,72,1452	0/0:26,0:26:75.26:0,75,1522	0/0:28,0:28:81.28:0,81,1645	0/0:31,0:31:93.32:0,93,1879	0/0:23,0:23:69.24:0,69,1390	0/0:32,0:32:96.33:0,96,1949	0/0:30,0:30:90.31:0,90,1816	1/1:6,12:17:36.10:434,36,0	1/1:0,24:24:63.19:789,63,0	1/1:3,20:23:57.19:768,57,0	0/0:20,0:20:54.18:0,54,1097	0/0:14,0:14:42.14:0,42,841	0/0:25,0:25:72.22:0,72,1388	0/0:14,0:14:39.13:0,39,766	0/0:36,0:36:99:0,108,2187	1/1:0,35:34:87.27:1101,87,0	0/0:12,0:12:36.12:0,36,730
chr10	105050388	.	GT	G	2506.72	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=16.310;DP=683;FS=0.000;HRun=1;HaplotypeScore=99.9327;InbreedingCoeff=0.9994;MQ=62.20;MQ0=1;MQRankSum=-5.276;QD=19.43;ReadPosRankSum=-0.253;VQSLOD=3.5478;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,156,2366	0/0:16,0:16:45.10:0,45,679	0/0:19,0:14:36.05:0,36,463	0/0:11,0:9:24.01:0,24,360	0/0:28,0:28:81.17:0,81,1225	0/0:22,0:22:66.22:0,66,1038	0/0:29,0:29:87.27:0,87,1338	1/1:3,22:25:68.42:527,68,0	0/0:13,0:13:39.13:0,39,623	0/0:24,0:24:72.24:0,72,1117	0/0:21,0:20:48.16:0,48,756	0/0:24,0:24:69.22:0,69,1073	0/0:25,0:25:72.24:0,72,1124	0/0:28,0:28:81.25:0,81,1243	0/0:33,0:33:99:0,99,1505	0/0:23,0:23:69.22:0,69,1077	0/0:34,0:34:99:0,102,1597	0/0:31,0:31:93.23:0,93,1404	1/1:6,12:17:47.73:389,48,0	1/1:3,22:25:61.58:507,62,0	1/1:1,20:21:52.29:467,52,0	0/0:21,0:21:60.18:0,60,906	0/0:14,0:14:42.11:0,42,625	0/0:22,0:22:63.21:0,63,1006	0/0:13,0:13:39.12:0,39,601	0/0:38,0:38:99:0,114,1746	1/1:10,30:39:93.08:793,93,0	0/0:12,0:12:36.12:0,36,567
chr10	105050823	.	A	AAC	4486.21	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=16.489;DP=764;FS=3.245;HRun=0;HaplotypeScore=122.7127;InbreedingCoeff=0.9999;MQ=79.18;MQ0=0;MQRankSum=-15.465;QD=35.60;ReadPosRankSum=-2.663;VQSLOD=6.0226;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,2096	0/0:15,0:15:45.15:0,45,734	0/0:33,0:33:93.28:0,93,1417	0/0:21,0:22:42.87:0,43,807	0/0:24,0:24:72.22:0,72,1149	0/0:22,0:22:63.21:0,63,1014	0/0:31,0:31:90.31:0,90,1467	1/1:5,35:40:99:1548,111,0	0/0:23,0:23:69.24:0,69,1126	0/0:31,0:31:93.30:0,93,1475	0/0:22,0:22:63.22:0,63,1028	0/0:28,0:28:81.28:0,81,1317	0/0:29,0:29:84.29:0,84,1367	0/0:24,0:24:72.25:0,72,1166	0/0:31,0:31:87.30:0,87,1420	0/0:26,0:26:75.26:0,75,1219	0/0:31,0:31:90.31:0,90,1465	0/0:36,0:36:99:0,105,1713	1/1:1,11:12:33.03:485,33,0	1/1:4,19:23:63.14:835,63,0	1/1:3,25:28:59.22:687,59,0	0/0:34,0:34:99:0,102,1647	0/0:31,0:31:90.31:0,90,1460	0/0:30,0:30:81.28:0,81,1304	0/0:18,0:18:54.17:0,54,858	0/0:34,0:34:93.32:0,93,1518	1/1:3,19:22:66.21:931,66,0	0/0:17,0:17:51.17:0,51,825
chr10	105050824	.	T	TCA	5224.92	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=15.828;DP=786;FS=3.083;HRun=0;HaplotypeScore=128.1066;InbreedingCoeff=1.0000;MQ=77.36;MQ0=0;MQRankSum=-15.220;QD=36.03;ReadPosRankSum=-2.761;VQSLOD=5.4701;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,2095	0/0:16,0:16:45.15:0,45,734	0/0:34,0:33:93.29:0,93,1403	0/0:20,0:20:59.14:0,59,812	0/0:23,0:23:69.24:0,69,1122	0/0:22,0:22:66.21:0,66,1051	0/0:31,0:31:93.30:0,93,1476	1/1:13,35:48:99:2038,141,0	0/0:23,0:23:69.24:0,69,1126	0/0:31,0:31:93.32:0,93,1510	0/0:22,0:22:66.21:0,66,1053	0/0:28,0:28:84.27:0,84,1347	0/0:31,0:31:87.28:0,87,1395	0/0:25,0:25:72.23:0,72,1151	0/0:32,0:32:93.29:0,93,1469	0/0:26,0:26:78.25:0,78,1249	0/0:32,0:32:93.30:0,93,1484	0/0:36,0:36:99:0,108,1736	1/1:6,11:17:45.14:652,45,0	1/1:5,19:24:59.79:831,60,0	1/1:8,25:33:57.17:768,57,0	0/0:34,0:34:99:0,102,1637	0/0:31,0:31:90.31:0,90,1468	0/0:30,0:30:84.18:0,84,1243	0/0:17,0:17:51.17:0,51,832	0/0:34,0:34:96.32:0,96,1541	1/1:3,20:22:66.22:935,66,0	0/0:17,0:17:51.17:0,51,832
chr10	105052378	.	T	TCC	1778.40	PASS	AB=0.718;AC=5;AF=0.089;AN=56;BaseQRankSum=11.087;DP=707;FS=4.712;HRun=0;HaplotypeScore=111.1242;InbreedingCoeff=-0.0903;MQ=65.83;MQ0=2;MQRankSum=-11.684;QD=14.23;ReadPosRankSum=1.849;VQSLOD=3.4388;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,172,2727	0/0:14,0:14:42.14:0,42,685	0/0:24,0:24:66.19:0,66,996	0/0:24,0:24:67.40:0,67,928	0/0:32,0:32:93.32:0,93,1517	0/0:23,0:23:66.23:0,66,1075	0/0:28,0:28:84.29:0,84,1367	0/1:12,5:15:56.72:57,0,110	0/0:29,0:29:87.29:0,87,1386	0/0:33,0:33:96.32:0,96,1543	0/0:22,0:22:60.20:0,60,979	0/0:20,0:20:60.20:0,60,979	0/0:18,0:18:51.16:0,51,808	0/0:19,0:19:57.19:0,57,930	0/0:31,0:31:90.31:0,90,1467	0/0:23,0:23:69.22:0,69,1100	0/0:25,0:25:75.24:0,75,1200	0/0:22,0:22:63.22:0,63,1028	0/1:10,4:15:99:173,0,137	0/1:13,16:38:17.41:680,0,17	0/1:3,7:13:78.58:218,0,79	0/0:28,0:28:75.24:0,75,1197	0/0:21,0:21:60.20:0,60,965	0/0:31,0:31:93.32:0,93,1518	0/0:24,0:24:72.25:0,72,1172	0/0:25,0:25:75.26:0,75,1224	0/1:6,22:33:30.54:768,0,31	0/0:8,0:8:24.08:0,24,392
chr10	105052379	.	T	TTTTGCTC	6056.73	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.093;DP=713;FS=6.922;HRun=0;HaplotypeScore=168.0784;InbreedingCoeff=0.9966;MQ=65.67;MQ0=2;MQRankSum=-12.651;QD=48.07;ReadPosRankSum=-0.985;VQSLOD=3.9620;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,175,4304	0/0:14,0:14:42.14:0,42,1160	0/0:25,0:24:66.20:0,66,1537	0/0:23,0:23:62:0,62,1236	0/0:31,0:31:93.32:0,93,2418	0/0:23,0:23:69.21:0,69,1721	0/0:28,0:28:84.29:0,84,2207	1/1:14,5:14:16.26:162,16,0	0/0:29,0:29:87.28:0,87,2291	0/0:32,0:32:93.32:0,93,2466	0/0:22,0:22:60.21:0,60,1621	0/0:21,0:21:60.21:0,60,1653	0/0:17,0:17:51.16:0,51,1314	0/0:19,0:19:57.20:0,57,1477	0/0:32,0:32:93.29:0,93,2408	0/0:23,0:23:69.22:0,69,1798	0/0:25,0:25:75.25:0,75,1909	0/0:22,0:22:63.22:0,63,1584	1/1:16,4:15:34.25:702,34,0	1/1:25,16:40:77.88:1878,78,0	1/1:6,7:13:32.99:811,33,0	0/0:28,0:28:78.24:0,78,1902	0/0:21,0:21:58.75:0,59,1506	0/0:31,0:31:93.32:0,93,2457	0/0:24,0:24:72.23:0,72,1847	0/0:25,0:25:75.26:0,75,1991	1/1:11,22:33:89.97:2504,90,0	0/0:10,0:10:24.08:0,24,663
chr10	105053407	.	GCTT	G	2822.38	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.210;DP=660;FS=1.566;HRun=0;HaplotypeScore=103.5473;InbreedingCoeff=0.9801;MQ=57.92;MQ0=5;MQRankSum=-9.166;QD=26.63;ReadPosRankSum=-1.164;VQSLOD=3.4806;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.21:0,81,1588	0/0:16,0:16:36.11:0,36,738	0/0:19,0:9:14.99:0,15,224	0/0:9,0:7:18.06:0,18,378	0/0:33,0:33:96.32:0,96,2011	0/0:32,0:32:90.29:0,90,1900	0/0:16,0:16:48.16:0,48,1037	1/1:5,11:14:33:402,33,0	0/0:22,0:22:63.20:0,63,1287	0/0:35,0:35:90.31:0,90,1926	0/0:18,0:18:48.10:0,48,848	0/0:24,0:24:72.23:0,72,1506	0/0:18,0:18:51.18:0,51,1102	0/0:25,0:25:72.25:0,72,1519	0/0:26,0:26:72.21:0,72,1503	0/0:23,0:23:66.23:0,66,1417	0/0:33,0:33:99:0,99,2037	0/0:32,0:32:81.75:0,82,1711	1/1:4,14:18:30.09:451,30,0	1/1:3,34:37:87.17:1287,87,0	1/1:3,7:10:9.03:143,9,0	0/0:24,0:24:66.21:0,66,1379	0/0:29,0:29:81.25:0,81,1660	0/0:19,0:19:51.17:0,51,1103	0/0:26,0:26:75.24:0,75,1582	0/0:38,0:38:99:0,105,2271	1/1:3,22:24:45.15:713,45,0	0/0:9,0:8:24.08:0,24,488
chr10	105053581	.	GTCCCCTCCAGCTCAGTCCTTGCTCTTCGCCTGAA	G	4016.52	PASS	AB=0.833;AC=6;AF=0.107;AN=56;BaseQRankSum=7.310;DP=723;FS=12.224;HRun=0;HaplotypeScore=528.5141;InbreedingCoeff=0.5857;MQ=56.21;MQ0=19;MQRankSum=-7.329;QD=52.16;ReadPosRankSum=1.705;VQSLOD=-0.4660;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:45:99:0,126,13411	0/0:14,0:14:42.14:0,42,5236	0/0:24,0:8:24.08:0,24,1840	0/0:29,0:12:30.10:0,30,2590	0/0:28,0:28:78.26:0,78,8634	0/0:21,0:21:60.21:0,60,6688	0/0:26,0:26:69.24:0,69,5976	0/0:13,0:10:15.05:0,15,870	0/0:35,0:35:96.33:0,96,10569	0/0:25,0:25:75.26:0,75,8660	0/0:22,0:22:63.22:0,63,8409	0/0:30,0:30:87.30:0,87,10574	0/0:22,0:22:66.23:0,66,7516	0/0:32,0:32:93.32:0,93,10750	0/0:22,0:22:57.17:0,57,5905	0/0:35,0:35:96.33:0,96,11042	0/0:42,0:42:99:0,115,13179	0/0:32,0:31:84.29:0,84,8996	1/1:6,6:10:12.04:593,12,0	0/1:13,13:24:99:1490,0,637	0/1:10,0:11:99:907,0,200	0/0:27,0:27:78.27:0,78,10101	0/0:19,0:19:57.20:0,57,6929	0/0:48,0:48:99:0,132,15071	0/0:16,0:16:45.15:0,45,4804	0/0:34,0:34:99:0,99,12131	1/1:10,14:24:12.04:1027,12,0	0/0:4,0:4:12.04:0,12,1820
chr10	105053591	.	GC	G	339.49	PASS	AB=0.825;AC=6;AF=0.107;AN=56;BaseQRankSum=7.234;DP=684;FS=15.321;HRun=1;HaplotypeScore=81.1369;InbreedingCoeff=0.5231;MQ=65.78;MQ0=14;MQRankSum=-7.022;QD=6.66;ReadPosRankSum=3.318;VQSLOD=-0.7022;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,2048	0/0:13,0:13:39.13:0,39,624	0/0:29,0:16:44.83:0,45,713	0/0:28,0:17:47.75:0,48,730	0/0:28,0:28:81.28:0,81,1294	0/0:25,0:25:75.26:0,75,1196	0/0:24,0:24:63.21:0,63,1007	0/0:6,0:5:9.03:0,9,144	0/0:31,0:31:93.30:0,93,1461	0/0:33,0:33:96.29:0,96,1432	0/0:22,0:22:66.23:0,66,1053	0/0:29,0:29:87.30:0,87,1391	0/0:23,0:23:69.22:0,69,1076	0/0:33,0:33:96.33:0,96,1535	0/0:20,0:20:57.18:0,57,886	0/0:34,0:34:99:0,102,1627	0/0:34,0:34:99:0,102,1606	0/0:29,0:28:78.27:0,78,1243	1/1:6,0:6:5.23:49,5,0	0/1:18,0:16:99:121,0,119	0/1:6,7:9:26.87:230,0,27	0/0:28,0:28:84.29:0,84,1341	0/0:19,0:19:57.19:0,57,909	0/0:49,0:49:99:0,147,2324	0/0:15,0:15:45.15:0,45,719	0/0:33,0:33:99:0,99,1583	1/1:14,0:14:9.67:63,10,0	0/0:4,0:4:12.04:0,12,192
chr10	105054063	.	CAAA	C	2432.74	PASS	AB=0.678;AC=13;AF=0.232;AN=56;BaseQRankSum=8.072;DP=545;FS=2.861;HRun=12;HaplotypeScore=92.3470;InbreedingCoeff=0.7395;MQ=60.05;MQ0=2;MQRankSum=-5.356;QD=15.40;ReadPosRankSum=1.071;VQSLOD=2.3046;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:42.13:0,42,764	0/0:6,0:15:35.91:0,36,331	0/1:12,0:9:10.97:11,0,117	0/0:9,0:5:12.04:0,12,222	0/0:17,0:20:51.17:0,51,971	0/1:1,0:29:0.01:0,0,37	0/1:2,1:20:16.20:16,0,18	1/1:4,21:17:51.10:583,51,0	0/0:17,0:19:54.16:0,54,964	0/0:29,0:32:84.26:0,84,1489	0/0:21,0:23:57.13:0,57,978	0/0:21,0:21:57.18:0,57,1073	0/0:18,0:18:48.16:0,48,932	0/0:14,0:14:39.12:0,39,699	0/0:23,0:25:66.16:0,66,1195	0/0:15,0:17:39.11:0,39,689	0/0:14,0:15:42.13:0,42,769	0/0:27,0:27:54.19:0,54,1030	1/1:0,14:14:42.11:504,42,0	1/1:4,21:25:51.04:624,51,0	1/1:0,9:8:12.04:152,12,0	0/0:19,0:19:54.14:0,54,930	0/0:18,0:21:55.39:0,55,967	0/0:12,0:14:39.13:0,39,737	0/0:3,0:26:19.94:0,20,43	0/0:24,0:24:51.18:0,51,1006	1/1:2,21:23:57.15:720,57,0	0/0:9,0:11:33.11:0,33,612
chr10	105055104	.	T	TC	178.53	PASS	AB=0.750;AC=7;AF=0.130;AN=54;BaseQRankSum=5.570;DP=629;FS=1.146;HRun=1;HaplotypeScore=75.1610;InbreedingCoeff=0.6998;MQ=55.14;MQ0=23;MQRankSum=-3.508;QD=7.76;ReadPosRankSum=-1.539;VQSLOD=0.2747;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.18:0,66,894	0/0:5,0:5:15.05:0,15,210	0/0:110,0:37:96.71:0,97,1158	0/0:135,0:36:61.40:0,61,753	0/0:15,0:15:42.13:0,42,571	0/0:15,0:15:45.15:0,45,629	0/0:23,0:23:63.21:0,63,871	1/1:0,1:1:2.99:23,3,0	0/0:9,0:9:24.08:0,24,336	0/0:13,0:13:39.13:0,39,540	0/0:11,0:11:30.10:0,30,420	0/0:16,0:16:48.15:0,48,654	0/0:20,0:20:57.19:0,57,790	0/0:18,0:17:51.17:0,51,712	0/0:26,0:26:78.26:0,78,1089	0/0:26,0:26:78.26:0,78,1073	0/0:17,0:17:51.17:0,51,709	0/0:9,1:10:9.77:0,10,334	0/1:3,2:6:33.53:85,0,34	1/1:4,5:9:6:70,6,0	./.	0/0:16,0:16:45.15:0,45,619	0/0:19,0:19:54.17:0,54,734	0/0:22,0:21:66.22:0,66,916	0/0:12,0:12:36.12:0,36,503	0/0:18,0:18:54.18:0,54,749	1/1:2,5:7:12.02:127,12,0	0/0:19,0:19:54.18:0,54,746
chr10	105055117	.	C	CT	112.66	PASS	AB=0.812;AC=6;AF=0.107;AN=56;BaseQRankSum=4.636;DP=614;FS=0.000;HRun=1;HaplotypeScore=70.9969;InbreedingCoeff=0.4336;MQ=52.16;MQ0=34;MQRankSum=-4.378;QD=4.51;ReadPosRankSum=-1.820;VQSLOD=-0.4364;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:60.20:0,60,831	0/0:5,0:5:15.05:0,15,206	0/0:115,0:30:49.68:0,50,877	0/0:147,0:31:60.16:0,60,755	0/0:15,0:15:42.13:0,42,568	0/0:13,0:13:39.13:0,39,544	0/0:17,0:17:51.16:0,51,693	0/0:2,0:2:4.44:0,4,13	0/0:11,0:11:33.10:0,33,441	0/0:14,0:14:42.14:0,42,586	0/0:11,0:11:33.11:0,33,460	0/0:14,0:13:39.13:0,39,537	0/0:14,0:14:42.13:0,42,566	0/0:15,0:14:39.13:0,39,543	0/0:24,0:24:69.22:0,69,938	0/0:25,0:25:75.25:0,75,1045	0/0:22,0:22:63.21:0,63,866	0/1:9,1:10:12.20:12,0,349	0/1:3,2:5:50.14:109,0,50	1/1:4,1:5:0.41:1,0,0	0/0:2,0:2:0.47:0,0,1	0/0:16,0:16:45.15:0,45,622	0/0:19,0:19:57.17:0,57,760	0/0:25,0:25:75.16:0,75,1001	0/0:15,0:15:45.15:0,45,618	0/0:15,0:15:45.15:0,45,624	1/1:1,3:5:6.02:94,6,0	0/0:9,0:9:24.06:0,24,316
chr10	105055127	.	CCT	C	143.53	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.719;DP=594;FS=0.000;HRun=0;HaplotypeScore=73.2570;InbreedingCoeff=0.8348;MQ=49.93;MQ0=40;MQRankSum=-5.221;QD=9.57;ReadPosRankSum=-2.561;VQSLOD=2.7887;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:63.22:0,63,1238	0/0:5,0:5:15.05:0,15,302	0/0:110,0:32:52.06:0,52,1164	0/0:144,0:27:54.28:0,54,953	0/0:16,0:16:45.14:0,45,914	0/0:12,0:12:36.12:0,36,708	0/0:19,0:19:57.18:0,57,1080	1/1:2,0:2:6.02:79,6,0	0/0:10,0:10:30.10:0,30,610	0/0:14,0:14:39.13:0,39,774	0/0:13,0:13:36.12:0,36,731	0/0:12,0:11:33.11:0,33,671	0/0:12,0:12:36.12:0,36,722	0/0:12,0:11:33.11:0,33,671	0/0:22,0:22:63.22:0,63,1277	0/0:24,0:24:72.22:0,72,1398	0/0:22,0:22:66.21:0,66,1243	0/0:12,0:12:31.66:0,32,663	1/1:2,2:4:8.86:111,9,0	1/1:2,1:3:6:54,6,0	1/1:2,2:3:3:25,3,0	0/0:17,0:17:42.14:0,42,831	0/0:18,0:18:54.17:0,54,1061	0/0:23,0:23:69.19:0,69,1358	0/0:14,0:14:42.14:0,42,831	0/0:15,0:15:45.14:0,45,859	1/1:0,2:2:2.80:13,3,0	0/0:8,0:8:21.07:0,21,423
chr10	105055134	.	C	CTCT	292.14	PASS	AB=0.667;AC=9;AF=0.161;AN=56;BaseQRankSum=5.183;DP=592;FS=12.883;HRun=0;HaplotypeScore=97.3471;InbreedingCoeff=0.7071;MQ=47.83;MQ0=34;MQRankSum=-4.937;QD=14.61;ReadPosRankSum=-2.609;VQSLOD=2.1035;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:59.79:0,60,933	0/0:6,0:6:15.04:0,15,223	0/0:95,0:27:50.43:0,50,752	0/0:118,0:22:31.19:0,31,597	0/0:19,0:19:42.40:0,42,657	0/0:13,0:13:29.94:0,30,480	0/0:18,0:18:44.56:0,45,688	1/1:2,0:2:6.02:121,6,0	0/0:12,0:12:36.12:0,36,566	0/0:15,0:15:39.13:0,39,626	0/0:13,0:13:33.03:0,33,507	0/0:16,0:15:32.47:0,32,498	0/0:12,0:12:33.11:0,33,538	0/0:14,0:13:33.08:0,33,511	0/0:27,0:26:54.11:0,54,874	0/0:22,0:22:60.12:0,60,964	0/0:26,0:26:66.10:0,66,977	0/0:13,0:13:34:0,34,550	0/1:3,2:6:8.83:211,0,9	1/1:4,1:5:6.01:56,6,0	1/1:2,2:3:2.99:24,3,0	0/0:20,0:20:44.90:0,45,661	0/0:23,0:23:48.06:0,48,737	0/0:26,0:26:66.22:0,66,1059	0/0:11,0:11:30.10:0,30,490	0/0:18,0:18:51.11:0,51,791	1/1:3,0:3:2.60:10,3,0	0/0:7,0:7:18.06:0,18,294
chr10	105055142	.	CCT	C	859.68	PASS	AB=0.943;AC=31;AF=0.620;AN=50;BaseQRankSum=4.461;DP=617;FS=17.259;HRun=0;HaplotypeScore=77.6035;InbreedingCoeff=0.2357;MQ=44.65;MQ0=38;MQRankSum=0.725;QD=2.54;ReadPosRankSum=2.015;VQSLOD=0.5270;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,2:27:8.85:77,9,0	0/0:7,0:8:3.01:0,3,39	0/0:77,0:19:0:0,0,0	./.	1/1:22,0:22:5.96:53,6,0	1/1:9,3:12:6.02:64,6,0	0/0:18,1:19:6.92:0,7,228	0/0:15,0:15:1.77:0,2,4	0/0:12,0:13:2.36:0,2,139	1/1:16,0:18:5.68:28,6,0	1/1:10,0:12:2.84:14,3,0	1/1:19,1:19:3.85:34,4,0	0/1:16,2:18:45.53:46,0,123	1/1:15,0:14:6.01:63,6,0	1/1:20,5:24:5.88:64,6,0	1/1:19,1:21:3.01:32,3,0	0/1:24,0:25:35.36:35,0,379	0/1:12,1:12:58.91:59,0,154	./.	./.	0/0:8,0:7:0:0,0,0	1/1:18,1:22:8.81:77,9,0	1/1:20,1:22:12.01:119,12,0	1/1:18,7:26:17.71:156,18,0	0/0:18,0:18:12.04:0,12,152	0/1:22,1:23:10.81:53,0,11	0/1:6,0:5:0.01:0,0,0	1/1:8,0:6:2.99:24,3,0
chr10	105055191	.	CTGCTTT	C	860.56	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=6.785;DP=514;FS=3.898;HRun=0;HaplotypeScore=113.2877;InbreedingCoeff=0.7546;MQ=61.07;MQ0=24;MQRankSum=-5.068;QD=15.94;ReadPosRankSum=-1.633;VQSLOD=2.6198;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:6.64:0,7,1332	0/0:12,0:12:29.43:0,29,765	0/0:31,0:13:22.35:0,22,923	0/0:48,0:17:41.43:0,41,784	0/0:26,0:26:62.77:0,63,1815	0/0:14,0:14:36.12:0,36,1041	0/0:24,0:23:66.36:0,66,1947	1/1:4,10:11:24.08:572,24,0	0/0:18,0:18:53.33:0,53,1427	0/0:11,0:10:5.29:0,5,751	0/0:14,0:14:19.54:0,20,1089	0/0:15,0:14:39.13:0,39,1247	0/0:22,0:22:44.37:0,44,1542	0/0:18,0:17:47.93:0,48,1239	0/0:16,0:16:32.70:0,33,889	0/0:15,0:15:39.13:0,39,1250	0/0:26,0:26:75:0,75,2282	0/1:17,0:16:0.59:1,0,1312	1/1:5,2:7:6.02:145,6,0	./.	1/1:2,5:6:4.37:71,4,0	0/0:19,0:18:38.26:0,38,981	0/0:23,0:23:47.34:0,47,1343	0/0:25,0:25:27.25:0,27,1734	0/0:19,0:18:45.15:0,45,1541	0/0:20,0:20:5.20:0,5,1478	1/1:4,5:8:9.03:210,9,0	0/0:16,0:15:45.08:0,45,1192
chr10	105055304	.	T	TA	4721.16	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=0.753;DP=688;FS=6.692;HRun=3;HaplotypeScore=75.5493;InbreedingCoeff=0.9994;MQ=75.34;MQ0=0;MQRankSum=-3.732;QD=36.88;ReadPosRankSum=-2.601;VQSLOD=4.1572;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,108,1267	0/0:14,0:14:42.13:0,42,504	0/0:19,0:19:51:0,51,568	0/0:24,0:24:57.04:0,57,643	0/0:35,0:35:99:0,102,1197	0/0:19,0:19:54.16:0,54,648	0/0:23,0:23:63.17:0,63,743	1/1:4,33:37:96.29:1302,96,0	0/0:22,0:22:63.19:0,63,756	0/0:20,0:20:57.15:0,57,655	0/0:17,0:17:48.13:0,48,564	0/0:27,0:27:78.22:0,78,923	0/0:16,0:16:45.14:0,45,540	0/0:35,0:35:93.28:0,93,1115	0/0:28,0:28:81.25:0,81,971	0/0:30,0:30:84.24:0,84,997	0/0:27,0:27:75.23:0,75,899	0/0:15,0:15:42.12:0,42,493	1/1:5,10:15:33.07:435,33,0	1/1:1,24:25:75.24:1033,75,0	1/1:2,29:31:84.24:1153,84,0	0/0:30,0:30:84.26:0,84,1008	0/0:22,0:22:66.20:0,66,792	0/0:31,0:31:90.23:0,90,1064	0/0:27,0:27:81.25:0,81,971	0/0:29,0:29:81.25:0,81,972	1/1:0,20:20:57.19:797,57,0	0/0:8,0:8:24.07:0,24,288
chr10	105055455	.	GT	G	5369.54	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.257;DP=779;FS=2.920;HRun=2;HaplotypeScore=97.3120;InbreedingCoeff=1.0000;MQ=69.21;MQ0=0;MQRankSum=-3.001;QD=36.04;ReadPosRankSum=-1.071;VQSLOD=4.6147;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,159,2320	0/0:12,0:12:36.12:0,36,540	0/0:23,0:23:60.18:0,60,803	0/0:24,0:24:67.52:0,68,915	0/0:21,0:21:57.18:0,57,832	0/0:34,0:34:99:0,99,1483	0/0:20,0:20:54.18:0,54,810	1/1:0,39:39:99:1506,117,0	0/0:36,0:36:99:0,105,1533	0/0:33,0:33:93.32:0,93,1394	0/0:20,0:20:60.20:0,60,899	0/0:21,0:21:60.20:0,60,899	0/0:28,0:28:81.27:0,81,1214	0/0:40,0:40:99:0,117,1736	0/0:28,0:28:81.26:0,81,1176	0/0:30,0:30:84.23:0,84,1214	0/0:27,0:27:78.26:0,78,1167	0/0:19,0:19:57.12:0,57,786	1/1:3,13:15:39.12:499,39,0	1/1:4,22:26:72.22:915,72,0	1/1:2,41:43:99:1558,120,0	0/0:25,0:25:75.21:0,75,1094	0/0:29,0:29:78.26:0,78,1150	0/0:32,0:32:96.33:0,96,1437	0/0:27,0:27:75.22:0,75,1082	0/0:28,0:28:84.28:0,84,1258	1/1:1,24:25:69.22:891,69,0	0/0:19,0:19:57.19:0,57,854
chr10	105055763	.	A	AG	6543.12	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=2.322;DP=719;FS=5.899;HRun=0;HaplotypeScore=79.7540;InbreedingCoeff=1.0000;MQ=83.40;MQ0=0;MQRankSum=-9.300;QD=43.33;ReadPosRankSum=-0.904;VQSLOD=4.8389;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.27:0,90,1237	0/0:13,0:13:36.12:0,36,503	0/0:30,0:30:90.20:0,90,1183	0/0:26,0:26:68.48:0,68,882	0/0:28,0:28:78.23:0,78,1054	0/0:27,0:27:75.23:0,75,1029	0/0:28,0:28:84.28:0,84,1171	1/1:2,43:41:99:1742,100,0	0/0:26,0:26:78.24:0,78,1071	0/0:36,0:36:99:0,108,1494	0/0:19,0:19:57.19:0,57,796	0/0:28,0:28:84.27:0,84,1153	0/0:22,0:22:66.21:0,66,908	0/0:19,0:19:57.19:0,57,797	0/0:31,0:31:93.30:0,93,1284	0/0:20,0:20:60.16:0,60,787	0/0:21,0:21:60.19:0,60,823	0/0:21,0:21:63.14:0,63,839	1/1:2,12:14:39.12:601,39,0	1/1:0,26:26:75.20:1167,75,0	1/1:0,30:30:84.22:1311,84,0	0/0:22,0:22:60.20:0,60,839	0/0:27,0:27:78.25:0,78,1074	0/0:19,0:19:57.19:0,57,796	0/0:27,0:27:78.26:0,78,1091	0/0:27,0:27:81.26:0,81,1114	1/1:0,36:36:99:1721,108,0	0/0:21,0:21:63.12:0,63,802
chr10	105056465	.	GA	G	1093.80	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.450;DP=658;FS=19.906;HRun=1;HaplotypeScore=85.2301;InbreedingCoeff=0.9660;MQ=69.46;MQ0=8;MQRankSum=-9.150;QD=12.87;ReadPosRankSum=-3.743;VQSLOD=0.4917;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,160,2526	0/0:7,0:7:21.06:0,21,313	0/0:30,0:30:89.88:0,90,1343	0/0:17,0:16:42.11:0,42,584	0/0:22,0:22:66.14:0,66,1021	0/0:28,0:28:84.24:0,84,1300	0/0:35,0:35:99:0,105,1655	1/1:0,25:17:48.15:620,48,0	0/0:20,0:20:60.11:0,60,878	0/0:27,0:27:75.16:0,75,1114	0/0:10,0:10:30.09:0,30,453	0/0:36,0:36:99:0,105,1630	0/0:34,0:34:99:0,102,1604	0/0:25,0:25:75.24:0,75,1174	0/0:30,0:30:90.29:0,90,1415	0/0:19,0:19:57.17:0,57,867	0/0:20,0:20:57.19:0,57,910	0/0:19,1:20:23.72:0,24,850	1/1:2,13:10:18.06:244,18,0	1/1:4,14:17:18:190,18,0	1/1:7,5:8:8.72:91,9,0	0/0:23,0:23:69.22:0,69,1080	0/0:19,0:19:57.16:0,57,859	0/0:34,0:33:99:0,102,1581	0/0:16,0:16:48.15:0,48,744	0/0:33,0:33:96.30:0,96,1489	1/1:1,14:10:9.03:116,9,0	0/0:13,0:13:39.13:0,39,623
chr10	105056471	.	G	GA	1178.71	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.066;DP=661;FS=32.603;HRun=2;HaplotypeScore=84.1260;InbreedingCoeff=0.9807;MQ=67.64;MQ0=9;MQRankSum=-7.192;QD=12.41;ReadPosRankSum=-4.901;VQSLOD=-0.3164;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,153,1855	0/0:6,0:6:18.06:0,18,223	0/0:28,0:28:60.90:0,61,861	0/0:17,0:16:38.73:0,39,445	0/0:22,0:22:60.19:0,60,744	0/0:26,0:26:78.25:0,78,965	0/0:32,0:32:90.28:0,90,1116	1/1:7,21:19:36.12:473,36,0	0/0:18,0:18:54.17:0,54,669	0/0:26,0:26:66.20:0,66,808	0/0:10,0:10:24.07:0,24,285	0/0:36,0:36:99:0,105,1276	0/0:33,0:33:96.30:0,96,1190	0/0:24,0:24:69.22:0,69,855	0/0:30,0:30:90.28:0,90,1115	0/0:21,0:21:57.18:0,57,706	0/0:21,0:21:54.16:0,54,657	0/0:22,0:22:60.17:0,60,722	1/1:4,14:11:18.06:251,18,0	1/1:4,13:16:27.04:304,27,0	1/1:11,5:12:20.66:202,21,0	0/0:22,0:22:63.19:0,63,769	0/0:18,0:18:51.14:0,51,617	0/0:38,0:36:96.30:0,96,1190	0/0:14,0:14:42.13:0,42,520	0/0:34,0:34:99:0,102,1254	1/1:5,11:11:9.03:119,9,0	0/0:12,0:12:36.09:0,36,432
chr10	105060712	.	T	TAC	272.49	PASS	AB=0.882;AC=9;AF=0.173;AN=52;BaseQRankSum=-1.489;DP=611;FS=16.941;HRun=0;HaplotypeScore=77.9565;InbreedingCoeff=0.1816;MQ=49.16;MQ0=82;MQRankSum=1.107;QD=2.23;ReadPosRankSum=0.643;VQSLOD=0.2637;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:8.98:0,9,172	0/0:4,0:4:2.90:0,3,16	./.	./.	0/0:13,0:11:8.36:0,8,80	0/1:10,7:17:1.91:39,0,2	0/1:20,0:19:57.03:89,0,57	1/1:25,0:19:1.36:3,1,0	0/0:16,0:15:14.22:0,14,116	0/0:23,0:21:20.61:0,21,205	0/1:6,0:6:9.16:9,0,95	0/0:21,0:21:18.04:0,18,189	0/0:14,0:13:10.80:0,11,83	0/0:22,0:22:11.97:0,12,106	0/1:15,0:15:13.16:13,0,207	0/0:30,0:29:29.87:0,30,280	0/0:18,0:20:26.64:0,27,245	0/0:26,0:27:27.91:0,28,251	1/1:18,0:14:5.29:37,5,0	0/0:18,0:17:7.27:0,7,36	0/0:39,0:34:7.24:0,7,95	0/0:15,0:15:9.01:0,9,96	0/0:10,0:11:21.06:0,21,229	0/0:31,0:33:8.35:0,8,439	0/1:12,9:21:14.66:206,0,15	0/0:15,0:11:9.30:0,9,74	0/0:32,0:25:8.72:0,9,63	0/0:19,0:19:34.50:0,35,331
chr10	105060927	.	TAC	T	437.66	PASS	AB=1.000;AC=17;AF=0.447;AN=38;BaseQRankSum=-4.765;DP=267;FS=9.479;HRun=0;HaplotypeScore=48.7156;InbreedingCoeff=0.4364;MQ=42.65;MQ0=29;MQRankSum=4.087;QD=3.87;ReadPosRankSum=3.327;VQSLOD=0.4112;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:7:5.78:41,6,0	0/0:3,0:2:0:0,0,0	./.	./.	./.	0/0:12,0:11:14.96:0,15,119	0/1:18,0:14:0.26:0,0,1	0/0:23,0:16:16.58:0,17,88	./.	0/1:7,0:7:6.33:37,0,6	./.	0/1:4,0:4:8.59:19,0,9	0/0:7,0:6:0:0,0,0	./.	1/1:8,0:7:14.95:118,15,0	./.	1/1:17,1:15:14.48:114,14,0	0/1:16,0:14:55.05:64,0,55	0/0:12,0:10:8.70:0,9,44	./.	0/1:13,0:9:0:0,0,0	./.	1/1:8,0:5:2.99:24,3,0	1/1:7,0:5:8.95:68,9,0	0/0:9,0:8:5.99:0,6,49	1/1:2,4:5:11.85:83,12,0	0/0:12,0:11:14.35:0,14,94	0/0:7,0:6:8.78:0,9,70
chr10	105060963	.	CATATATATATATATATATATATATATAT	C	193.08	PASS	AB=0.844;AC=4;AF=0.182;AN=22;BaseQRankSum=2.833;DP=210;FS=9.379;HRun=0;HaplotypeScore=103.6438;InbreedingCoeff=0.1322;MQ=38.33;MQ0=22;MQRankSum=-1.807;QD=5.52;ReadPosRankSum=0.830;VQSLOD=1.3921;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:5:6.01:0,6,78	./.	./.	./.	./.	0/0:11,6:16:4.51:0,5,23	1/1:13,2:12:2.61:149,3,0	0/0:25,0:20:20.98:0,21,433	./.	0/0:5,0:5:3.90:0,4,41	./.	./.	./.	./.	./.	./.	0/0:16,0:13:20.17:0,20,1437	0/0:20,0:18:27.51:0,28,2410	0/1:6,0:7:21.14:21,0,226	./.	0/0:9,0:5:0.47:0,0,1	./.	./.	./.	./.	./.	0/1:10,0:12:99:109,0,201	0/0:9,0:8:9.03:0,9,541
chr10	105064466	.	CACAGATGGACAG	C	2222.68	PASS	AB=0.692;AC=9;AF=0.161;AN=56;BaseQRankSum=9.853;DP=635;FS=27.061;HRun=0;HaplotypeScore=206.7262;InbreedingCoeff=0.7078;MQ=57.65;MQ0=6;MQRankSum=-4.062;QD=20.58;ReadPosRankSum=-0.854;VQSLOD=1.1102;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,5248	0/0:15,0:15:0.42:0,0,1196	0/0:15,0:9:27.09:0,27,512	0/0:13,0:8:21.05:0,21,410	0/0:21,0:21:57.19:0,57,2635	0/0:21,0:21:14.80:0,15,456	0/0:24,0:23:7.26:0,7,136	1/1:23,0:22:2.93:55,3,0	0/0:29,0:29:81.28:0,81,3467	0/0:31,0:31:90.31:0,90,2848	0/0:24,0:24:51.17:0,51,2665	0/0:22,0:22:66.23:0,66,2640	0/0:20,0:20:51.17:0,51,2180	0/0:21,0:21:60.20:0,60,2601	0/0:31,0:31:90.28:0,90,3754	0/0:30,0:30:84.29:0,84,3294	0/0:24,0:24:63.19:0,63,2405	0/0:26,0:26:78.27:0,78,3231	1/1:7,9:15:6.93:528,7,0	1/1:5,22:27:32.57:1010,33,0	0/1:10,8:18:6.33:93,0,6	0/0:21,0:21:57.17:0,57,2175	0/0:15,0:15:39.13:0,39,1710	0/0:28,0:28:81.28:0,81,3521	0/0:17,0:17:24.12:0,24,563	0/0:28,0:28:84.27:0,84,3325	1/1:4,20:23:20.19:684,20,0	0/0:2,0:2:3.01:0,3,183
chr10	105064469	.	AGATG	A	1079.54	PASS	AB=0.873;AC=13;AF=0.232;AN=56;BaseQRankSum=11.733;DP=636;FS=21.393;HRun=0;HaplotypeScore=117.1542;InbreedingCoeff=0.6196;MQ=57.52;MQ0=9;MQRankSum=-3.259;QD=6.62;ReadPosRankSum=-0.987;VQSLOD=1.1533;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,3016	0/0:15,0:15:0.42:0,0,443	0/0:15,0:9:27.09:0,27,473	0/0:13,0:8:21.05:0,21,389	0/0:21,0:21:58.08:0,58,1366	1/1:7,12:19:22.99:323,23,0	0/1:10,16:25:10.48:10,0,18	1/1:18,0:16:1.96:30,2,0	0/0:28,0:28:81.28:0,81,1829	0/0:32,0:32:93.32:0,93,1994	0/0:23,0:23:54.18:0,54,1369	0/0:22,0:22:66.23:0,66,1483	0/0:20,0:20:54.16:0,54,1217	0/0:23,0:23:66.21:0,66,1517	0/0:32,0:32:92.09:0,92,2059	0/0:31,0:31:84.29:0,84,1890	0/0:23,0:23:60.16:0,60,1262	0/0:26,0:26:78.27:0,78,1766	0/1:17,0:15:6:121,0,6	1/1:24,0:24:23.84:218,24,0	0/1:17,0:17:9.76:17,0,10	0/0:22,0:22:63.19:0,63,1347	0/0:17,0:17:45.15:0,45,1021	0/0:29,0:29:78.27:0,78,1825	1/1:9,9:18:10.28:371,10,0	0/0:30,0:29:84.72:0,85,1849	1/1:24,0:23:19.96:159,20,0	0/0:2,0:2:3.01:0,3,82
chr10	105064473	.	GGACA	G	1311.68	PASS	AB=0.970;AC=14;AF=0.280;AN=50;BaseQRankSum=10.082;DP=626;FS=11.739;HRun=0;HaplotypeScore=114.8907;InbreedingCoeff=0.6998;MQ=57.46;MQ0=9;MQRankSum=-3.188;QD=7.81;ReadPosRankSum=-0.952;VQSLOD=2.0212;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:75.24:0,75,1682	0/0:13,0:13:24.08:0,24,549	./.	./.	0/0:21,1:22:2.67:0,3,944	1/1:17,0:17:21.07:327,21,0	0/1:24,0:23:7.86:31,0,8	./.	0/0:28,0:28:48.16:0,48,1101	0/0:36,0:36:45.15:0,45,1020	0/0:23,0:23:48.16:0,48,1101	0/0:22,0:22:39.04:0,39,777	0/0:20,0:20:9.17:0,9,721	0/0:23,0:23:25.18:0,25,950	0/0:30,1:31:19.15:0,19,1271	0/0:30,0:30:51.13:0,51,1045	0/0:23,0:23:12.97:0,13,671	0/0:27,0:27:51.15:0,51,1086	1/1:15,0:13:15.01:151,15,0	1/1:23,0:23:30.02:271,30,0	1/1:17,0:17:3:26,3,0	0/0:21,0:21:36.12:0,36,852	0/0:19,0:19:36.12:0,36,825	0/0:29,0:29:57.18:0,57,1236	1/1:18,0:18:22.31:457,22,0	0/1:29,2:30:29.93:30,0,1046	1/1:23,0:22:21.02:194,21,0	0/0:2,0:2:3.01:0,3,71
chr10	105065402	.	AT	A	131.86	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.529;DP=491;FS=3.466;HRun=5;HaplotypeScore=44.0423;InbreedingCoeff=0.9250;MQ=75.96;MQ0=0;MQRankSum=-0.748;QD=16.48;ReadPosRankSum=0.190;VQSLOD=2.6612;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.19:0,57,779	1/1:1,7:8:21.02:224,21,0	0/0:18,0:18:39.13:0,39,524	0/0:12,0:12:25.63:0,26,331	0/0:34,0:34:93.31:0,93,1271	0/0:18,0:18:54.17:0,54,722	0/0:10,0:10:30.08:0,30,380	0/0:25,0:25:63.19:0,63,833	0/0:4,0:4:12.04:0,12,163	0/0:27,0:27:81.26:0,81,1092	0/0:19,0:19:54.18:0,54,739	0/0:12,0:12:36.12:0,36,493	0/0:9,0:9:24.05:0,24,295	0/0:8,0:8:24.08:0,24,328	0/0:12,0:12:33.11:0,33,451	0/0:13,0:13:36.12:0,36,492	0/0:26,0:26:75.25:0,75,1024	0/0:23,0:23:66.22:0,66,899	0/0:26,0:26:69.22:0,69,931	0/0:29,0:29:87.26:0,87,1157	0/0:7,0:7:18.04:0,18,215	0/0:13,0:13:39.13:0,39,532	0/0:12,0:12:36.12:0,36,492	0/0:4,0:4:12.03:0,12,148	0/0:28,0:28:84.27:0,84,1134	0/0:27,0:27:81.26:0,81,1093	0/0:24,0:24:66.21:0,66,886	0/0:22,0:22:66.22:0,66,903
chr10	105065493	.	C	CTG	1717.98	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-6.901;DP=605;FS=21.538;HRun=0;HaplotypeScore=77.8599;InbreedingCoeff=0.8407;MQ=64.37;MQ0=8;MQRankSum=0.201;QD=18.28;ReadPosRankSum=-0.065;VQSLOD=1.8991;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:98.66:0,99,1109	0/0:5,0:5:15.05:0,15,180	0/0:38,0:9:11.87:0,12,120	0/1:32,0:19:6.57:7,0,15	0/0:28,0:28:54.14:0,54,631	1/1:4,19:21:48.16:766,48,0	1/1:6,8:14:27.07:404,27,0	0/0:36,0:36:63.15:0,63,723	0/0:15,0:15:33.10:0,33,396	0/0:17,1:18:42.12:0,42,494	0/0:19,0:19:36.11:0,36,431	0/0:15,0:16:41.91:0,42,452	0/0:12,0:12:33.09:0,33,384	0/0:8,0:8:21.06:0,21,251	0/0:23,0:23:51.12:0,51,592	0/0:12,0:12:27.08:0,27,324	0/0:32,0:32:93.24:0,93,1098	0/0:31,0:30:66.20:0,66,790	0/0:18,0:17:27.07:0,27,313	0/0:21,0:22:47.96:0,48,542	0/0:20,0:21:63:0,63,709	0/0:13,0:15:41.96:0,42,482	0/0:15,0:15:36.11:0,36,431	0/0:16,0:16:40.61:0,41,475	1/1:6,19:25:12.19:684,12,0	0/0:24,0:24:54.16:0,54,648	0/0:27,0:27:63.02:0,63,733	0/0:21,0:21:45.12:0,45,527
chr10	105065677	.	TTG	T	187.44	PASS	AB=0.882;AC=10;AF=0.192;AN=52;BaseQRankSum=3.134;DP=599;FS=0.824;HRun=0;HaplotypeScore=88.7794;InbreedingCoeff=-0.2130;MQ=63.70;MQ0=6;MQRankSum=-0.274;QD=0.98;ReadPosRankSum=0.575;VQSLOD=1.7484;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:30:2.99:3,0,308	./.	./.	0/0:25,0:18:0:0,0,0	0/1:34,1:36:14.51:15,0,451	0/0:12,0:28:9.01:0,9,93	0/0:24,0:23:13.10:0,13,85	0/0:28,0:27:16.22:0,16,157	0/0:26,1:27:8.78:0,9,454	0/1:18,0:18:13.36:13,0,165	0/1:7,1:9:34.98:35,0,76	0/0:17,0:16:18.06:0,18,263	0/1:14,2:16:8.98:9,0,281	0/1:14,2:16:8.99:9,0,263	0/0:20,0:30:15.47:0,15,147	0/0:13,0:13:8:0,8,406	0/0:36,2:38:21.12:0,21,722	0/1:17,1:19:25.24:25,0,344	0/0:18,0:22:12.03:0,12,115	0/0:12,0:12:8.71:0,9,95	0/0:19,0:34:3.48:0,3,39	0/0:8,0:8:15.02:0,15,178	0/1:6,3:9:33.05:87,0,33	0/0:38,0:38:46.08:0,46,826	0/0:6,0:16:6.01:0,6,68	0/1:17,3:20:43.83:44,0,167	0/0:12,0:18:14.92:0,15,146	0/1:13,5:18:78.12:78,0,138
chr10	105067920	.	AGAAAGAAAG	A	1881.57	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.314;DP=554;FS=24.212;HRun=0;HaplotypeScore=152.7868;InbreedingCoeff=0.9842;MQ=65.62;MQ0=0;MQRankSum=-6.711;QD=23.52;ReadPosRankSum=-2.927;VQSLOD=1.1382;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:91.19:0,91,3962	0/0:12,0:12:33.10:0,33,1327	0/0:19,0:15:45.14:0,45,1630	0/0:20,0:15:31.05:0,31,978	0/0:30,0:30:87.28:0,87,3801	0/0:24,0:24:72.23:0,72,3120	0/0:17,0:17:51.16:0,51,2088	1/1:15,24:27:33.37:642,33,0	0/0:33,0:33:99:0,99,4051	0/0:34,0:34:99:0,102,4380	0/0:20,0:20:48.13:0,48,2001	0/0:11,0:11:33.11:0,33,1274	0/0:24,0:24:72.20:0,72,2934	0/0:27,0:27:81.20:0,81,3376	0/0:15,0:15:45.15:0,45,1977	0/0:16,0:16:48.11:0,48,1504	0/0:25,0:25:75.22:0,75,3098	0/0:13,0:13:39.09:0,39,1525	1/1:6,12:16:30.07:702,30,0	1/1:2,7:9:14.85:336,15,0	1/1:1,4:5:11.95:147,12,0	0/0:16,0:16:42.12:0,42,1759	0/0:15,0:15:36.11:0,36,1386	0/0:14,0:14:39.03:0,39,1828	0/0:20,0:20:51.16:0,51,2149	0/0:29,0:29:87.28:0,87,3880	1/1:6,3:9:14.98:226,15,0	0/0:9,0:9:27.09:0,27,1298
chr10	105068168	.	A	AT	304.19	PASS	AB=0.667;AC=5;AF=0.093;AN=54;BaseQRankSum=5.082;DP=515;FS=14.233;HRun=0;HaplotypeScore=55.2063;InbreedingCoeff=0.6593;MQ=60.37;MQ0=3;MQRankSum=-4.946;QD=11.70;ReadPosRankSum=1.571;VQSLOD=3.2422;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,1636	0/0:8,0:8:24.05:0,24,301	0/0:15,0:9:18.06:0,18,252	0/0:30,0:24:69.01:0,69,877	0/0:13,0:13:39.13:0,39,543	0/0:12,0:11:27.09:0,27,377	0/0:29,0:29:87.23:0,87,1161	0/0:1,2:1:2.99:0,3,24	0/0:30,0:30:90.29:0,90,1242	0/0:30,0:29:87.27:0,87,1175	0/0:19,0:19:57.19:0,57,797	0/0:35,0:35:99:0,105,1436	0/0:23,0:23:66.22:0,66,923	0/0:14,0:14:42.14:0,42,587	0/0:22,0:22:66.22:0,66,923	0/0:16,0:16:48.16:0,48,671	0/0:31,0:31:93.29:0,93,1281	0/0:18,0:18:54.18:0,54,754	0/1:3,3:5:16.86:87,0,17	1/1:1,10:7:15.05:239,15,0	./.	0/0:15,0:15:45.14:0,45,611	0/0:15,0:15:45.15:0,45,629	0/0:31,0:31:93.31:0,93,1301	0/0:17,0:17:51.16:0,51,697	0/0:12,0:12:36.12:0,36,503	1/1:0,9:5:6.02:96,6,0	0/0:6,0:6:15.05:0,15,210
chr10	105068336	.	ACAAG	A	78.01	PASS	AC=4;AF=0.080;AN=50;BaseQRankSum=2.974;DP=572;FS=2.312;HRun=0;HaplotypeScore=89.8353;InbreedingCoeff=0.7548;MQ=57.85;MQ0=6;MQRankSum=-2.863;QD=7.09;ReadPosRankSum=0.098;VQSLOD=1.6477;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,102,2740	0/0:11,0:11:30.10:0,30,740	0/0:21,0:4:9.03:0,9,234	0/0:27,0:10:27.07:0,27,638	0/0:29,0:29:51.18:0,51,1362	0/0:21,0:19:24.05:0,24,444	0/0:28,0:23:45.09:0,45,887	./.	0/0:25,0:25:75.23:0,75,1887	0/0:30,0:28:75.25:0,75,1908	0/0:27,0:27:54.03:0,54,1358	0/0:29,0:29:81.28:0,81,2190	0/0:25,0:25:72.25:0,72,1881	0/0:15,0:15:42.13:0,42,1056	0/0:25,0:25:75.24:0,75,1820	0/0:16,0:16:48.16:0,48,1291	0/0:37,0:37:99:0,108,2898	0/0:21,0:21:63.22:0,63,1725	./.	1/1:2,6:4:3.01:58,3,0	./.	0/0:21,0:20:36.59:0,37,937	0/0:15,0:15:21.06:0,21,518	0/0:31,0:31:90.31:0,90,2387	0/0:11,0:10:6.02:0,6,122	0/0:24,0:24:69.24:0,69,1792	1/1:0,3:3:6.02:116,6,0	0/0:29,0:29:78.27:0,78,1945
chr10	105068753	.	CAT	C	978.35	PASS	AB=0.806;AC=12;AF=0.222;AN=54;BaseQRankSum=7.548;DP=360;FS=13.853;HRun=0;HaplotypeScore=43.7911;InbreedingCoeff=0.2913;MQ=63.44;MQ0=10;MQRankSum=-6.172;QD=8.98;ReadPosRankSum=0.022;VQSLOD=1.0653;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:26,2:28:22.17:22,0,749	0/0:5,0:5:15.05:0,15,251	0/0:7,0:4:3:0,3,50	0/0:10,0:5:9.03:0,9,120	0/0:24,0:24:60.19:0,60,971	1/1:0,15:11:21.07:267,21,0	0/1:3,4:3:31.61:67,0,32	0/0:29,1:22:45.07:0,45,636	0/0:9,0:9:24.08:0,24,402	0/0:15,0:15:42.14:0,42,703	0/0:15,0:15:39.13:0,39,647	0/0:7,0:7:18.06:0,18,297	0/0:15,0:15:33.11:0,33,552	0/0:11,0:11:24.08:0,24,402	0/1:6,1:7:20.08:20,0,233	0/0:15,0:15:36.12:0,36,602	0/0:25,0:24:63.22:0,63,1054	0/0:18,0:18:45.15:0,45,739	0/1:7,1:7:29.15:29,0,85	1/1:3,6:6:12.04:153,12,0	0/1:4,1:5:32.17:32,0,44	./.	0/0:9,0:9:27.09:0,27,448	0/0:2,0:2:3.01:0,3,50	1/1:1,15:15:30.10:382,30,0	0/0:25,0:25:66.23:0,66,1094	0/1:7,7:11:79.01:170,0,79	0/0:8,0:8:15.05:0,15,242
chr10	105068930	.	CAG	C	234.62	PASS	AB=0.636;AC=7;AF=0.130;AN=54;BaseQRankSum=4.160;DP=488;FS=5.668;HRun=0;HaplotypeScore=73.5323;InbreedingCoeff=0.7086;MQ=64.70;MQ0=0;MQRankSum=-4.560;QD=8.09;ReadPosRankSum=0.239;VQSLOD=2.5731;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.28:0,87,1647	0/0:4,0:4:9.03:0,9,174	0/0:18,0:17:48.16:0,48,888	0/0:14,0:14:42.08:0,42,752	0/0:26,0:26:69.24:0,69,1333	0/0:22,0:22:60.21:0,60,1158	0/0:19,0:19:57.20:0,57,1078	1/1:1,11:9:9.03:138,9,0	0/0:22,0:22:66.23:0,66,1274	0/0:36,0:36:99:0,105,1983	0/0:23,0:23:60.21:0,60,1158	0/0:17,0:17:45.15:0,45,869	0/0:17,0:17:51.16:0,51,951	0/0:15,0:15:45.15:0,45,856	0/0:22,0:22:60.21:0,60,1157	0/0:15,0:15:45.15:0,45,869	0/0:22,0:22:63.22:0,63,1198	0/0:17,0:17:51.13:0,51,947	1/1:0,4:3:3.01:46,3,0	1/1:0,6:4:9.03:138,9,0	./.	0/0:14,0:14:36.12:0,36,691	0/0:16,0:16:42.13:0,42,777	0/0:31,0:31:87.30:0,87,1655	0/0:19,0:19:51.16:0,51,951	0/0:34,0:34:99:0,102,1960	0/1:3,4:4:33.38:40,0,33	0/0:6,0:6:18.06:0,18,348
chr10	105069269	.	ACAAAAGTTAACCT	A	2364.31	PASS	AB=1.000;AC=7;AF=0.146;AN=48;BaseQRankSum=6.193;DP=606;FS=22.672;HRun=0;HaplotypeScore=106.4905;InbreedingCoeff=0.7652;MQ=36.93;MQ0=119;MQRankSum=-5.016;QD=35.29;ReadPosRankSum=3.413;VQSLOD=1.3179;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:48:12.04:0,12,703	0/0:5,0:5:15.05:0,15,844	0/1:28,0:4:5.90:6,0,150	./.	0/0:20,0:19:36.12:0,36,2204	1/1:1,11:11:27.09:1070,27,0	1/1:9,6:10:12.04:475,12,0	./.	0/0:28,0:23:30.10:0,30,1488	0/0:23,0:23:60.20:0,60,3424	0/0:26,0:22:33.07:0,33,1880	0/0:19,0:18:12.03:0,12,608	0/0:27,0:23:27.19:0,27,1389	0/0:29,0:23:27.09:0,27,1481	0/0:30,0:29:18.06:0,18,942	0/0:19,0:16:23.73:0,24,1057	0/0:34,0:21:12.04:0,12,685	0/0:30,0:21:9.03:0,9,450	0/0:18,0:8:21.05:0,21,744	./.	0/0:20,0:10:6.02:0,6,393	0/0:31,0:29:42.13:0,42,2182	0/0:16,0:15:18.99:0,19,685	0/0:23,0:19:24.08:0,24,1574	1/1:2,10:10:24.08:951,24,0	0/0:24,0:22:60.18:0,60,3443	./.	0/0:11,0:8:15.05:0,15,669
chr10	105069944	.	TGTTC	T	323.49	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=5.297;DP=455;FS=20.495;HRun=0;HaplotypeScore=85.1062;InbreedingCoeff=0.7692;MQ=70.26;MQ0=3;MQRankSum=-5.407;QD=9.80;ReadPosRankSum=-1.389;VQSLOD=0.4545;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:57.20:0,57,1530	0/0:13,0:13:36.11:0,36,888	0/0:25,0:21:56.99:0,57,1216	0/0:28,0:25:44.05:0,44,963	0/0:14,0:14:42.14:0,42,1075	0/0:10,0:7:18.06:0,18,329	0/0:8,0:5:12.04:0,12,190	0/1:4,0:2:0:0,0,0	0/0:16,0:16:48.12:0,48,1210	0/0:25,0:25:63.19:0,63,1479	0/0:16,0:16:45.09:0,45,1031	0/0:16,0:16:42.13:0,42,1010	0/0:17,0:17:48.16:0,48,1228	0/0:24,0:24:69.22:0,69,1717	0/0:13,0:13:39.13:0,39,1002	0/0:23,0:23:66.23:0,66,1710	0/0:26,0:26:69.22:0,69,1715	0/0:26,0:26:75.21:0,75,1858	1/1:4,5:7:12.03:183,12,0	1/1:2,3:7:0.42:98,0,0	1/1:1,2:3:6.02:79,6,0	0/0:16,0:16:45.15:0,45,1140	0/0:25,0:24:69.17:0,69,1679	0/0:20,0:20:57.18:0,57,1440	0/0:9,0:3:6.02:0,6,93	0/0:26,0:26:75.20:0,75,1775	1/1:1,7:2:6.02:92,6,0	0/0:3,0:3:9.03:0,9,172
chr10	105070546	.	G	GT	2116.67	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=8.797;DP=593;FS=2.882;HRun=0;HaplotypeScore=63.4663;InbreedingCoeff=0.9071;MQ=32.70;MQ0=170;MQRankSum=-2.528;QD=11.38;ReadPosRankSum=-0.215;VQSLOD=3.5252;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:21:18.06:0,18,232	0/0:9,0:9:18.06:0,18,250	./.	0/0:28,0:1:3.01:0,3,42	0/0:20,0:20:18.06:0,18,251	1/1:2,16:8:12.01:145,12,0	1/1:8,12:5:15.02:190,15,0	1/1:16,14:8:23.99:292,24,0	0/0:19,0:17:33.09:0,33,441	0/0:16,0:13:39.13:0,39,545	0/0:15,0:11:3.01:0,3,42	0/0:29,0:28:51.09:0,51,666	0/0:19,0:17:30.10:0,30,418	0/0:27,0:26:45.15:0,45,616	0/0:18,0:16:18.03:0,18,245	0/0:19,0:16:32.63:0,33,460	0/0:35,0:22:39.11:0,39,526	0/0:19,0:12:24.08:0,24,335	1/1:4,20:14:42.10:572,42,0	1/1:0,10:6:8.82:130,9,0	1/1:16,36:24:35.98:500,36,0	0/0:15,0:14:12.04:0,12,167	0/0:16,0:16:18.06:0,18,240	0/0:21,0:20:27.08:0,27,352	1/1:0,6:5:15.01:185,15,0	0/0:30,0:26:75.24:0,75,1025	1/1:0,25:18:21.07:299,21,0	0/0:8,0:8:21.01:0,21,252
chr10	105071189	.	C	CA	735.54	PASS	AB=1.000;AC=36;AF=0.947;AN=38;BaseQRankSum=-0.054;DP=64;FS=0.000;HRun=1;HaplotypeScore=20.0683;InbreedingCoeff=-0.0950;MQ=105.46;MQ0=0;MQRankSum=-2.598;QD=12.06;ReadPosRankSum=-0.108;VQSLOD=1.4545;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:3:25,3,0	./.	0/1:12,0:9:0.58:92,0,1	0/1:6,0:6:10.91:33,0,11	1/1:2,0:2:3.01:39,3,0	./.	./.	1/1:4,0:4:8.95:84,9,0	1/1:2,0:2:3:25,3,0	1/1:2,0:2:5.75:40,6,0	1/1:1,0:1:3.01:39,3,0	1/1:1,3:4:0.47:1,0,0	1/1:2,0:2:2.97:20,3,0	1/1:1,0:1:2.96:19,3,0	./.	./.	./.	./.	1/1:1,0:1:2.98:21,3,0	./.	1/1:3,0:3:6.41:41,6,0	1/1:3,0:3:5.99:48,6,0	1/1:2,0:2:6.02:85,6,0	1/1:5,0:5:2.99:23,3,0	1/1:1,0:1:2.99:24,3,0	1/1:3,0:3:8.95:80,9,0	1/1:2,0:2:6.02:78,6,0	./.
chr10	105071524	.	AAACCC	A	53.22	PASS	AB=0.945;AC=7;AF=0.130;AN=54;BaseQRankSum=5.165;DP=331;FS=2.205;HRun=0;HaplotypeScore=115.0688;InbreedingCoeff=0.1352;MQ=44.93;MQ0=1;MQRankSum=-0.928;QD=0.99;ReadPosRankSum=2.157;VQSLOD=1.9193;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:13.86:0,14,229	0/1:7,0:7:13.23:13,0,223	0/0:23,0:19:18.76:0,19,1350	0/0:24,0:17:47.68:0,48,1519	0/0:19,1:19:30.61:0,31,518	0/0:9,0:9:22.16:0,22,398	0/0:8,0:8:17.72:0,18,327	0/0:20,0:20:60.21:0,60,1862	0/0:10,0:10:30.04:0,30,497	0/0:32,1:34:26.82:0,27,2311	0/0:10,0:10:20.74:0,21,304	0/0:4,0:4:5.82:0,6,112	0/0:7,0:7:12.02:0,12,190	0/0:6,0:6:15.05:0,15,280	0/0:12,0:12:10.12:0,10,436	0/1:7,1:8:8.04:8,0,264	./.	1/1:3,0:3:9.03:122,9,0	0/0:13,0:13:10.65:0,11,1001	0/0:13,0:13:18.78:0,19,308	0/0:8,0:8:15.05:0,15,358	0/0:16,0:16:21.61:0,22,404	0/1:12,1:13:4.02:4,0,296	0/0:5,0:5:12.04:0,12,193	0/0:10,0:10:30.06:0,30,646	0/0:12,1:13:3.01:0,3,898	0/1:13,0:13:4.22:4,0,819	0/1:9,1:10:17.72:18,0,602
chr10	105071527	.	C	CA	96.92	PASS	AB=0.855;AC=4;AF=0.074;AN=54;BaseQRankSum=4.652;DP=336;FS=0.000;HRun=3;HaplotypeScore=110.3242;InbreedingCoeff=0.2871;MQ=45.95;MQ0=1;MQRankSum=-3.951;QD=2.36;ReadPosRankSum=3.365;VQSLOD=-0.1693;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:13.51:0,14,146	0/1:6,2:8:24.53:25,0,137	0/0:28,0:24:53.89:0,54,714	0/0:27,0:19:55.37:0,55,719	0/0:19,2:20:31.91:0,32,346	0/0:8,0:8:21.02:0,21,240	0/0:7,0:7:17.94:0,18,186	0/0:20,0:20:60.05:0,60,790	0/0:11,0:11:32.87:0,33,338	0/1:27,3:30:60.62:61,0,925	0/0:8,2:10:20.55:0,21,189	0/0:4,0:4:5.70:0,6,70	0/0:7,0:7:9.03:0,9,106	0/0:7,0:7:15.05:0,15,178	0/0:12,0:12:12.47:0,12,237	0/0:8,0:8:6.05:0,6,166	./.	1/1:0,3:3:9.03:119,9,0	0/0:13,0:13:26.14:0,26,429	0/0:11,2:12:15.36:0,15,180	0/0:7,1:8:15.05:0,15,191	0/0:10,5:15:20.31:0,20,242	0/0:11,3:14:5.88:0,6,162	0/0:5,0:5:11.97:0,12,122	0/0:11,0:11:29.96:0,30,340	0/0:13,0:13:22.05:0,22,378	0/0:13,0:13:10.42:0,10,374	0/0:9,1:10:14.36:0,14,302
chr10	105071608	.	C	CAG	134.66	PASS	AB=0.961;AC=16;AF=0.286;AN=56;BaseQRankSum=4.387;DP=383;FS=0.000;HRun=0;HaplotypeScore=136.9378;InbreedingCoeff=0.2732;MQ=35.01;MQ0=13;MQRankSum=-1.200;QD=0.76;ReadPosRankSum=2.717;VQSLOD=2.1764;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:2.99:0,3,23	0/0:7,0:7:2.77:0,3,20	0/0:11,0:2:5.95:0,6,60	0/0:9,0:2:5.96:0,6,43	1/1:25,0:19:6.13:30,6,0	1/1:3,3:6:6.02:86,6,0	0/1:7,6:12:0:0,0,0	0/0:13,0:12:35.42:0,35,229	0/1:13,0:12:7.33:7,0,11	0/0:25,0:24:19.63:0,20,309	0/1:24,0:20:28.86:29,0,32	0/1:11,0:9:0.01:0,0,0	0/1:10,0:9:0:0,0,0	0/0:11,0:11:2.99:0,3,24	0/1:14,0:13:6.75:7,0,10	0/0:8,0:8:2.99:0,3,24	0/0:8,0:8:0.89:0,1,2	0/0:7,0:7:15.10:0,15,97	0/0:11,0:7:17.33:0,17,98	0/0:23,0:20:11.44:0,11,87	0/0:17,0:17:14.78:0,15,117	1/1:11,0:11:1.55:5,2,0	0/1:24,0:19:1.39:1,0,19	0/0:7,0:7:2.94:0,3,20	1/1:4,4:7:3.51:94,4,0	0/0:21,0:17:18.39:0,18,225	0/0:12,0:11:6.34:0,6,63	0/1:18,0:17:2.22:2,0,52
chr10	105071853	.	ACC	A	624.10	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=8.662;DP=503;FS=6.909;HRun=3;HaplotypeScore=82.9134;InbreedingCoeff=0.4938;MQ=52.74;MQ0=8;MQRankSum=-0.757;QD=5.78;ReadPosRankSum=-0.717;VQSLOD=-0.5522;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:72.56:0,73,1522	0/0:8,0:7:21.06:0,21,356	0/0:29,0:5:3.78:0,4,53	0/1:30,0:8:17.42:17,0,108	0/0:25,0:25:26.97:0,27,455	1/1:7,15:16:13.76:375,14,0	1/1:1,20:20:21.07:301,21,0	0/0:23,0:22:65.69:0,66,695	0/0:19,0:19:40.98:0,41,879	0/0:13,0:13:39.07:0,39,643	0/0:14,0:13:15.05:0,15,290	0/0:15,0:14:27.96:0,28,554	0/0:15,0:15:42.09:0,42,763	0/0:17,0:17:32.84:0,33,686	0/0:15,0:15:45.15:0,45,855	0/0:15,0:15:45.09:0,45,768	0/0:24,0:24:38.30:0,38,840	0/0:22,0:22:44.43:0,44,831	0/1:11,0:10:13.16:13,0,181	0/0:14,0:14:10.26:0,10,61	0/0:12,0:12:23.96:0,24,207	0/0:6,0:6:9.03:0,9,152	0/0:13,0:13:23.95:0,24,452	0/0:24,0:24:63.17:0,63,1115	1/1:0,9:6:3:42,3,0	0/0:21,0:20:60.15:0,60,1028	0/1:15,0:14:21.94:22,0,179	0/0:13,0:13:39.13:0,39,727
chr10	105071855	.	CCA	C	260.37	PASS	AB=0.945;AC=7;AF=0.125;AN=56;BaseQRankSum=7.470;DP=515;FS=9.550;HRun=0;HaplotypeScore=84.5305;InbreedingCoeff=0.1104;MQ=52.56;MQ0=9;MQRankSum=2.204;QD=2.26;ReadPosRankSum=0.047;VQSLOD=0.8170;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,4:39:7.65:0,8,1107	0/0:8,0:7:18.06:0,18,265	0/0:28,0:5:5.98:0,6,66	0/0:31,1:9:8.32:0,8,98	0/0:24,0:24:23.98:0,24,381	0/1:21,0:15:11.79:141,0,12	1/1:20,0:19:20.61:130,21,0	0/0:23,0:22:26.54:0,27,280	0/0:17,1:18:15.40:0,15,697	0/0:17,0:17:37.72:0,38,546	0/0:15,0:14:15.05:0,15,239	0/1:16,1:16:1.10:1,0,414	0/0:16,0:16:42.14:0,42,649	0/0:14,1:16:3.36:0,3,516	0/0:15,0:15:45.15:0,45,695	0/0:15,0:15:36.12:0,36,573	0/1:21,3:25:70.29:70,0,544	0/1:20,2:22:26.38:26,0,529	0/0:12,0:10:11.90:0,12,125	0/0:15,0:15:2.74:0,3,12	0/0:11,0:11:2.80:0,3,13	0/0:6,0:6:9.03:0,9,142	0/0:13,0:13:0.22:0,0,330	0/0:24,0:24:54.18:0,54,835	0/1:10,0:7:18.44:18,0,19	0/0:23,0:22:57.12:0,57,826	0/0:16,0:15:16.71:0,17,148	0/0:14,0:14:42.10:0,42,639
chr10	105071878	.	A	ACACACAC	880.06	PASS	AB=0.985;AC=6;AF=0.107;AN=56;BaseQRankSum=4.700;DP=548;FS=4.066;HRun=0;HaplotypeScore=131.5198;InbreedingCoeff=0.2342;MQ=53.30;MQ0=15;MQRankSum=-5.220;QD=11.14;ReadPosRankSum=-1.126;VQSLOD=2.2597;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:83.20:0,83,2356	0/0:9,0:8:15.04:0,15,356	0/0:30,0:6:15.02:0,15,228	0/0:30,0:11:29.98:0,30,480	0/0:25,0:24:53.73:0,54,852	0/0:23,0:17:25.30:0,25,358	0/0:16,0:15:29.54:0,30,350	0/1:21,0:18:63.58:85,0,64	0/0:19,0:19:51.18:0,51,1369	0/0:28,0:27:81.21:0,81,1462	0/0:14,0:13:38.84:0,39,624	0/0:12,0:12:33.07:0,33,833	0/0:15,0:15:39.12:0,39,966	0/0:21,0:21:57.18:0,57,1321	0/0:16,0:16:45.14:0,45,1109	0/0:16,0:16:48.13:0,48,1148	0/0:26,0:25:69.13:0,69,1552	0/0:22,0:22:60.06:0,60,1313	0/1:16,0:12:38.66:135,0,39	0/1:15,1:13:13.74:65,0,14	0/1:8,0:8:36.01:69,0,36	0/0:6,0:6:12:0,12,263	0/0:15,0:15:41.46:0,41,702	0/0:23,0:23:57.10:0,57,1254	0/0:14,0:9:11.22:0,11,56	0/0:24,0:23:69.23:0,69,1639	1/1:13,5:17:12.27:654,12,0	0/0:24,0:24:69.20:0,69,1573
chr10	105072465	.	T	TAC	284.96	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-0.145;DP=641;FS=1.478;HRun=0;HaplotypeScore=76.8361;InbreedingCoeff=0.8963;MQ=63.57;MQ0=3;MQRankSum=-0.649;QD=8.90;ReadPosRankSum=-1.030;VQSLOD=3.0579;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:50:99:0,129,1933	0/0:11,0:10:30.10:0,30,459	0/0:19,0:18:46.71:0,47,613	0/0:25,0:25:66.06:0,66,878	0/0:17,0:17:45.15:0,45,688	1/1:1,11:8:9.03:173,9,0	1/1:0,11:8:6.02:115,6,0	0/0:33,0:33:93.26:0,93,1319	0/0:25,0:25:72.24:0,72,1101	0/0:20,0:20:60.16:0,60,858	0/0:11,0:11:33.07:0,33,439	0/0:26,0:26:78.26:0,78,1193	0/0:16,0:16:48.12:0,48,687	0/0:32,0:32:93.23:0,93,1325	0/0:17,0:17:51.16:0,51,759	0/0:39,0:39:99:0,114,1699	0/0:17,0:17:51.13:0,51,731	0/0:18,0:18:51.16:0,51,756	0/0:24,1:25:72.19:0,72,1051	0/0:18,1:19:48.15:0,48,712	0/0:50,0:50:99:0,141,2132	0/0:13,0:13:39.13:0,39,597	0/0:14,0:14:42.13:0,42,613	0/0:42,0:42:99:0,120,1805	1/1:1,8:8:6.02:115,6,0	0/0:25,0:25:72.14:0,72,994	0/0:34,0:34:96.28:0,96,1393	0/0:10,0:10:30.10:0,30,456
chr10	105072630	.	C	CT	146.48	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=1.679;DP=637;FS=6.723;HRun=3;HaplotypeScore=52.4458;InbreedingCoeff=0.8695;MQ=51.56;MQ0=23;MQRankSum=-3.707;QD=5.86;ReadPosRankSum=-1.191;VQSLOD=-0.1850;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:87.27:0,87,1044	0/0:13,0:13:33.10:0,33,396	0/0:33,0:9:24.07:0,24,288	0/0:19,0:3:6.02:0,6,71	0/0:30,0:28:69.21:0,69,828	1/1:1,10:4:6.02:84,6,0	1/1:3,11:3:12.04:168,12,0	0/0:42,0:30:81.23:0,81,959	0/0:19,0:19:48.13:0,48,565	0/0:28,0:27:75.23:0,75,899	0/0:12,0:11:18.05:0,18,216	0/0:21,0:21:60.16:0,60,696	0/0:22,0:22:63.19:0,63,756	0/0:20,0:20:54.15:0,54,637	0/0:21,0:21:60.16:0,60,698	0/0:23,0:23:66.20:0,66,792	0/0:32,0:32:90.28:0,90,1080	0/0:14,0:14:39.12:0,39,466	0/0:20,0:18:45.12:0,45,525	0/0:20,1:21:48.15:0,48,576	0/0:37,0:30:66.17:0,66,777	0/0:20,0:20:45.14:0,45,540	0/0:23,0:23:45.09:0,45,540	0/0:26,0:26:75.23:0,75,900	./.	0/0:24,0:24:69.21:0,69,828	0/0:35,0:34:93.28:0,93,1115	0/0:14,0:14:39.12:0,39,468
chr10	105072817	.	GTGTCTGTCTGTCTGTC	G	5190.99	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.177;DP=620;FS=1.280;HRun=0;HaplotypeScore=252.9647;InbreedingCoeff=0.8920;MQ=57.06;MQ0=3;MQRankSum=-8.997;QD=36.30;ReadPosRankSum=1.779;VQSLOD=4.1457;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:45:99:0,108,6514	0/0:2,0:8:18.06:0,18,697	0/0:29,0:20:26.95:0,27,1098	0/0:26,0:19:24.08:0,24,916	0/0:20,0:21:42.13:0,42,2748	0/0:11,0:8:3.01:0,3,49	0/0:11,0:19:12.04:0,12,195	1/1:29,0:26:9.01:96,9,0	0/0:17,0:17:36.12:0,36,2704	0/0:19,0:19:39.13:0,39,2684	0/0:11,0:11:27.09:0,27,1901	0/0:20,0:20:45.15:0,45,3360	0/0:17,0:17:33.11:0,33,2133	0/0:20,0:20:45.15:0,45,3360	0/0:18,0:18:36.12:0,36,2464	0/0:14,0:14:35.17:0,35,2379	0/0:38,0:38:90.29:0,90,6009	0/0:28,0:28:66.23:0,66,4518	1/1:15,12:25:30.06:854,30,0	1/1:9,17:25:48.16:2119,48,0	1/1:21,5:26:3.01:133,3,0	0/0:16,0:16:42.14:0,42,3014	0/0:13,0:13:21.05:0,21,1277	0/0:25,0:25:57.20:0,57,3936	0/0:7,0:18:33.11:0,33,591	0/0:27,0:27:57.20:0,57,4119	1/1:14,21:29:45.15:1989,45,0	0/0:7,0:7:18.06:0,18,1178
chr10	105083087	.	TG	T	1732.05	PASS	AC=38;AF=0.905;AN=42;BaseQRankSum=-2.900;DP=83;FS=0.000;HRun=2;HaplotypeScore=12.1087;InbreedingCoeff=0.2114;MQ=59.75;MQ0=0;MQRankSum=-2.900;QD=24.74;ReadPosRankSum=1.430;VQSLOD=3.1449;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:15.05:194,15,0	./.	0/0:2,0:1:0.89:0,1,2	0/0:3,2:2:4.22:0,4,24	1/1:0,4:4:12.04:155,12,0	./.	./.	1/1:0,11:7:21.07:272,21,0	./.	1/1:0,4:4:12.04:155,12,0	1/1:0,4:2:3.01:39,3,0	1/1:1,2:2:3.01:39,3,0	1/1:0,2:2:6.02:78,6,0	1/1:0,1:1:3.01:39,3,0	1/1:0,4:4:3.01:39,3,0	1/1:0,4:4:12.04:151,12,0	1/1:0,3:3:6.02:78,6,0	1/1:0,2:2:3.01:39,3,0	1/1:0,1:1:3.01:39,3,0	1/1:0,2:1:3.01:41,3,0	./.	1/1:0,2:2:6.02:78,6,0	1/1:0,4:2:6.02:78,6,0	1/1:0,2:2:3.01:39,3,0	./.	1/1:0,3:3:9.03:117,9,0	1/1:1,6:7:12.04:155,12,0	./.
chr10	105083146	.	TAA	T	1139.94	PASS	AB=0.906;AC=12;AF=0.214;AN=56;BaseQRankSum=4.481;DP=276;FS=3.586;HRun=11;HaplotypeScore=48.5799;InbreedingCoeff=0.7455;MQ=59.35;MQ0=9;MQRankSum=-1.817;QD=14.80;ReadPosRankSum=-0.130;VQSLOD=1.4261;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:45.05:0,45,617	0/0:1,0:2:3:0,3,29	0/1:11,0:5:2.97:3,0,73	0/0:12,0:2:5.05:0,5,19	0/0:16,0:16:39.12:0,39,600	0/0:13,0:12:20.73:0,21,221	0/0:9,0:9:20.89:0,21,159	1/1:5,8:12:18:190,18,0	0/0:4,0:4:12.04:0,12,179	0/0:9,0:8:21.07:0,21,323	0/0:14,0:14:37.37:0,37,557	0/0:7,0:8:24.08:0,24,346	0/1:7,1:7:10.76:11,0,256	0/0:4,0:4:12.04:0,12,185	0/0:14,0:13:36.12:0,36,548	0/0:8,0:8:21.04:0,21,298	0/0:11,0:11:27.09:0,27,416	0/0:11,0:11:30.10:0,30,457	1/1:4,6:8:18.03:191,18,0	1/1:2,10:10:29.37:281,29,0	1/1:1,7:8:24.06:255,24,0	0/0:9,0:8:21.03:0,21,291	0/0:11,0:10:30.02:0,30,386	0/0:4,0:5:15:0,15,182	0/0:4,0:4:11.95:0,12,93	0/0:11,0:11:30.10:0,30,462	1/1:2,12:14:36.09:383,36,0	0/0:7,0:8:21.07:0,21,297
chr10	105083154	.	A	AG	660.55	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=3.306;DP=286;FS=3.919;HRun=0;HaplotypeScore=47.2333;InbreedingCoeff=0.6220;MQ=60.74;MQ0=4;MQRankSum=0.060;QD=15.73;ReadPosRankSum=1.763;VQSLOD=5.3481;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.05:0,48,587	0/0:3,0:3:1.41:0,1,19	0/0:7,0:5:11.69:0,12,106	0/0:7,0:3:2.13:0,2,26	0/0:17,0:17:45.10:0,45,588	1/1:1,13:12:22.35:397,22,0	1/1:1,7:8:2.10:225,2,0	0/0:13,0:12:12.69:0,13,132	0/0:7,0:7:21.04:0,21,245	0/0:11,0:10:30.08:0,30,376	0/0:16,0:16:41.16:0,41,529	0/0:9,0:9:18.85:0,19,288	0/0:8,0:7:19.31:0,19,252	0/0:4,0:4:12.04:0,12,167	0/0:15,0:14:39.12:0,39,527	0/0:8,0:8:24:0,24,296	0/0:12,0:12:30.09:0,30,401	0/0:12,0:12:33.09:0,33,441	0/0:10,0:8:4.07:0,4,92	0/1:15,0:13:2.33:2,0,160	0/0:8,1:9:15.18:0,15,105	0/0:8,0:7:21.03:0,21,269	0/0:12,0:11:32.98:0,33,381	0/0:7,0:7:12.80:0,13,167	1/1:0,5:5:12.04:162,12,0	0/0:11,0:11:33.10:0,33,445	0/0:14,0:14:40.79:0,41,236	0/0:8,0:8:15.15:0,15,246
chr10	105083540	.	T	TA	1873.84	PASS	AB=0.955;AC=11;AF=0.196;AN=56;BaseQRankSum=-6.279;DP=590;FS=11.745;HRun=11;HaplotypeScore=76.4150;InbreedingCoeff=0.8884;MQ=60.02;MQ0=3;MQRankSum=-2.193;QD=14.87;ReadPosRankSum=-3.477;VQSLOD=1.9669;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:74.64:0,75,578	0/0:3,0:15:22.40:0,22,65	0/0:14,0:8:7.06:0,7,35	0/0:14,0:12:13.98:0,14,99	0/0:30,0:31:67.61:0,68,516	0/0:5,0:18:23.35:0,23,82	0/0:1,0:16:30.55:0,31,88	1/1:6,22:28:62.94:616,63,0	0/0:16,0:16:26.83:0,27,207	0/0:31,0:31:59.69:0,60,464	0/1:19,1:21:4.61:5,0,140	0/0:19,0:19:38.82:0,39,302	0/0:29,0:29:59.68:0,60,462	0/0:26,0:26:50.63:0,51,395	0/0:25,0:25:65.72:0,66,511	0/0:22,0:22:44.77:0,45,348	0/0:19,0:19:44.74:0,45,343	0/0:18,0:17:35.76:0,36,272	1/1:1,17:17:42.06:413,42,0	1/1:5,15:18:27.02:263,27,0	1/1:4,10:14:18.04:183,18,0	0/0:18,0:18:26.86:0,27,209	0/0:27,0:27:42.22:0,42,326	0/0:15,0:15:41.84:0,42,325	0/0:4,0:18:28.52:0,29,82	0/0:22,0:23:43.83:0,44,331	1/1:4,20:24:59.79:569,60,0	0/0:10,0:10:26.90:0,27,209
chr10	105083890	.	TC	T	1636.78	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.772;DP=808;FS=19.255;HRun=1;HaplotypeScore=82.9338;InbreedingCoeff=0.9990;MQ=56.26;MQ0=8;MQRankSum=-4.866;QD=31.48;ReadPosRankSum=2.324;VQSLOD=2.1278;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:99:0,129,1995	0/0:9,0:9:27.09:0,27,432	0/0:32,0:13:39.13:0,39,624	0/0:31,0:19:53.39:0,53,818	0/0:19,0:19:57.19:0,57,907	1/1:0,23:22:60.20:838,60,0	1/1:0,16:15:30.10:419,30,0	0/0:29,0:27:81.23:0,81,1230	0/0:29,0:29:78.23:0,78,1196	0/0:34,0:34:99:0,102,1626	0/0:16,0:16:48.12:0,48,694	0/0:35,0:35:96.32:0,96,1524	0/0:39,0:39:99:0,115,1789	0/0:51,0:51:99:0,151,2389	0/0:33,0:33:99:0,99,1580	0/0:23,0:23:69.24:0,69,1103	0/0:37,0:37:99:0,108,1651	0/0:21,0:21:57.12:0,57,845	0/0:17,0:14:42.14:0,42,672	0/0:17,0:16:45.15:0,45,719	0/0:82,0:78:99:0,220,3437	0/0:32,0:32:90.26:0,90,1365	0/0:17,0:17:51.13:0,51,784	0/0:49,0:49:99:0,138,2133	1/1:0,13:13:39.09:522,39,0	0/0:29,0:29:87.30:0,87,1388	0/0:17,0:16:48.16:0,48,757	0/0:9,0:9:27.09:0,27,429
chr10	105083955	.	CA	C	329.80	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=5.606;DP=869;FS=28.786;HRun=1;HaplotypeScore=82.6456;InbreedingCoeff=0.8896;MQ=50.75;MQ0=87;MQRankSum=-5.225;QD=13.19;ReadPosRankSum=0.809;VQSLOD=1.1262;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:57:99:0,138,2184	0/0:9,0:9:18.06:0,18,288	0/0:14,0:1:3.01:0,3,39	./.	0/0:12,0:12:33.11:0,33,528	1/1:0,11:7:12.04:167,12,0	1/1:2,7:5:11.61:166,12,0	0/0:47,0:22:63.17:0,63,966	0/0:38,0:38:99:0,99,1557	0/0:36,0:35:99:0,99,1518	0/0:19,0:19:45.15:0,45,719	0/0:27,0:27:75.25:0,75,1188	0/0:43,0:43:99:0,111,1750	0/0:44,0:44:99:0,114,1792	0/0:35,0:35:99:0,99,1569	0/0:35,0:35:93.32:0,93,1479	0/0:41,0:41:99:0,117,1841	0/0:23,0:22:66.22:0,66,1048	0/0:42,0:19:57.18:0,57,883	0/0:26,0:24:69.24:0,69,1103	0/0:125,0:91:99:0,138,2195	0/0:24,0:24:66.17:0,66,1048	0/0:12,0:12:30.10:0,30,479	0/0:34,0:34:87.28:0,87,1360	1/1:1,4:5:9.03:125,9,0	0/0:31,0:30:90.29:0,90,1409	0/0:30,0:25:72.19:0,72,1083	0/0:9,0:9:18.06:0,18,288
chr10	105084164	.	ACATG	A	89.62	PASS	AB=0.833;AC=4;AF=0.074;AN=54;BaseQRankSum=5.104;DP=548;FS=15.208;HRun=0;HaplotypeScore=94.5256;InbreedingCoeff=0.3745;MQ=61.31;MQ0=0;MQRankSum=-3.797;QD=3.45;ReadPosRankSum=-2.876;VQSLOD=-0.3561;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,160,4424	0/0:9,0:9:24.08:0,24,643	0/1:13,0:12:0.59:1,0,642	0/0:21,0:21:42.63:0,43,1333	0/0:16,0:16:48.14:0,48,1269	1/1:0,1:1:2.97:20,3,0	./.	0/0:20,0:20:60.21:0,60,1690	0/0:30,0:30:84.29:0,84,2369	0/0:35,0:35:99:0,105,2973	0/0:11,0:11:30.10:0,30,825	0/0:19,0:19:57.19:0,57,1533	0/0:27,0:27:75.21:0,75,1983	0/0:16,0:16:42.13:0,42,1133	0/0:24,0:24:72.20:0,72,1828	0/0:24,0:24:69.22:0,69,1811	0/0:31,0:31:93.32:0,93,2567	0/0:8,0:8:24.04:0,24,560	0/0:21,0:21:63.21:0,63,1715	0/0:10,0:10:26.99:0,27,639	0/0:31,0:31:90.31:0,90,2445	0/0:13,0:13:36.12:0,36,1003	0/0:16,0:16:39.05:0,39,1069	0/0:28,0:28:84.25:0,84,2282	0/1:7,4:7:48.51:159,0,49	0/0:17,0:17:51.18:0,51,1451	0/0:31,0:30:90.31:0,90,2535	0/0:8,0:8:21.05:0,21,503
chr10	105085081	.	T	TG	771.83	PASS	AB=0.912;AC=7;AF=0.125;AN=56;BaseQRankSum=2.109;DP=664;FS=43.352;HRun=2;HaplotypeScore=85.4705;InbreedingCoeff=0.8346;MQ=63.61;MQ0=5;MQRankSum=-5.667;QD=12.65;ReadPosRankSum=0.472;VQSLOD=0.1733;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,1621	0/0:14,0:14:39.12:0,39,483	0/0:20,0:16:45.10:0,45,531	0/0:31,0:29:69.18:0,69,814	0/0:25,0:25:72.23:0,72,892	1/1:1,14:15:36.12:517,36,0	1/1:0,8:6:12.04:172,12,0	0/0:36,0:33:84.26:0,84,1039	0/0:26,0:25:75.22:0,75,916	0/0:37,0:37:99:0,111,1354	0/0:10,0:10:24.06:0,24,283	0/0:19,0:19:57.18:0,57,706	0/0:19,0:19:54.17:0,54,669	0/0:21,0:21:63.18:0,63,765	0/0:21,0:20:57.18:0,57,706	0/0:17,0:17:51.16:0,51,632	0/0:30,0:30:87.27:0,87,1078	0/0:32,0:32:93.29:0,93,1153	0/0:32,0:30:87.27:0,87,1078	0/1:28,3:29:8.09:8,0,767	0/0:31,0:31:93.28:0,93,1136	0/0:26,0:26:60.19:0,60,744	0/0:21,0:21:60.17:0,60,730	0/0:23,0:23:66.21:0,66,816	1/1:0,7:6:15.05:216,15,0	0/0:34,0:34:93.29:0,93,1153	0/0:26,0:26:75.18:0,75,897	0/0:6,0:6:15.05:0,15,186
chr10	105085085	.	G	GTCATTCATTCAT	1278.87	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.457;DP=667;FS=28.584;HRun=0;HaplotypeScore=233.4013;InbreedingCoeff=0.8599;MQ=62.92;MQ0=0;MQRankSum=-3.630;QD=35.52;ReadPosRankSum=-1.417;VQSLOD=1.7117;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,123,3980	0/0:14,0:14:30.10:0,30,958	0/0:20,0:17:30.10:0,30,796	0/0:30,0:28:9.99:0,10,909	0/0:25,0:25:48.16:0,48,1514	1/1:10,6:16:21.07:1069,21,0	1/1:11,0:8:6.02:221,6,0	0/0:32,0:32:39.06:0,39,1144	0/0:25,0:24:63.13:0,63,1978	0/0:37,0:37:99:0,99,3256	0/0:11,0:11:18.06:0,18,553	0/0:21,0:21:54.12:0,54,1730	0/0:21,0:22:57.17:0,57,1756	0/0:21,0:21:57.16:0,57,1852	0/0:22,0:21:54:0,54,1362	0/0:17,0:17:45.15:0,45,1570	0/0:30,0:30:66.23:0,66,2216	0/0:33,0:33:78.23:0,78,2491	0/0:28,0:28:42.14:0,42,1468	0/0:28,0:28:58.65:0,59,1682	0/0:30,0:30:76.49:0,76,2367	0/0:25,0:25:48.15:0,48,1552	0/0:22,0:22:44.94:0,45,1452	0/0:23,0:23:47.80:0,48,1593	1/1:8,1:6:3.01:112,3,0	0/0:34,0:34:90.30:0,90,2973	0/0:27,0:27:72.20:0,72,2227	0/0:7,0:7:12.01:0,12,325
chr10	105085231	.	TTGTGTGTG	T	739.05	PASS	AB=0.855;AC=8;AF=0.160;AN=50;BaseQRankSum=4.483;DP=636;FS=7.478;HRun=0;HaplotypeScore=142.1698;InbreedingCoeff=0.3874;MQ=35.28;MQ0=143;MQRankSum=-4.934;QD=5.77;ReadPosRankSum=1.055;VQSLOD=1.9312;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:31:30.57:0,31,808	0/0:8,0:6:9.03:0,9,235	./.	./.	0/0:16,0:12:18.06:0,18,718	1/1:3,0:4:6.02:112,6,0	0/0:12,0:8:2.98:0,3,22	./.	0/0:34,0:31:54.19:0,54,1708	0/0:28,0:26:42.74:0,43,1067	0/0:15,0:11:3.01:0,3,115	0/0:15,0:17:27.09:0,27,642	0/0:15,0:15:12.98:0,13,329	0/0:24,0:25:20.75:0,21,668	0/0:17,0:18:12.04:0,12,276	0/0:23,0:23:45.15:0,45,1490	0/0:32,0:29:33.11:0,33,1235	0/0:19,0:14:21.07:0,21,852	0/1:22,0:17:17.07:25,0,17	0/1:17,3:14:27.31:177,0,27	0/1:36,8:21:0:0,0,0	0/0:21,0:14:12.04:0,12,477	0/0:11,0:9:6.02:0,6,215	0/0:34,0:34:48.16:0,48,1638	0/1:7,0:8:7.36:208,0,7	0/0:27,0:22:30.10:0,30,878	1/1:18,7:22:15.05:345,15,0	0/0:17,0:13:18.01:0,18,729
chr10	105087425	.	GAGA	G	1841.34	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.237;DP=762;FS=16.668;HRun=0;HaplotypeScore=107.5374;InbreedingCoeff=0.9989;MQ=61.95;MQ0=14;MQRankSum=-1.973;QD=25.57;ReadPosRankSum=1.389;VQSLOD=2.7898;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:78.61:0,79,1809	0/0:15,0:15:42.10:0,42,841	0/0:36,0:19:25.94:0,26,816	0/0:41,0:30:61.48:0,61,1036	0/0:27,0:27:33.10:0,33,687	1/1:1,21:22:54.18:866,54,0	1/1:8,19:20:44.79:629,45,0	0/0:30,0:29:69.19:0,69,1334	0/0:32,0:32:84.03:0,84,1798	0/0:33,0:33:96.29:0,96,1899	0/0:25,0:25:45.12:0,45,888	0/0:21,0:21:54.15:0,54,1115	0/0:31,0:31:84.27:0,84,1750	0/0:21,0:21:48.16:0,48,1041	0/0:31,0:31:74.99:0,75,1577	0/0:24,0:24:57.20:0,57,1242	0/0:21,0:21:60.12:0,60,1145	0/0:21,0:20:54.19:0,54,1171	0/0:20,0:15:42.09:0,42,822	0/0:28,0:28:84.29:0,84,1851	0/0:28,0:28:84.25:0,84,1722	0/0:23,0:23:36.31:0,36,805	0/0:25,0:25:54.12:0,54,1144	0/0:34,1:35:87.16:0,87,1743	1/1:7,15:20:33.06:490,33,0	0/0:38,0:38:99:0,105,2176	0/0:34,0:33:87.30:0,87,1901	0/0:12,0:12:27.09:0,27,577
chr10	105087478	.	G	GGAA	1850.23	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.128;DP=718;FS=0.662;HRun=0;HaplotypeScore=103.3621;InbreedingCoeff=0.9975;MQ=56.78;MQ0=1;MQRankSum=-1.312;QD=29.37;ReadPosRankSum=0.002;VQSLOD=3.9069;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:92.85:0,93,1439	0/0:11,0:11:30.10:0,30,452	0/0:27,0:26:45.09:0,45,629	0/0:20,0:19:39.11:0,39,582	0/0:20,0:20:36.08:0,36,499	1/1:6,15:22:39.05:730,39,0	1/1:8,13:18:27.09:569,27,0	0/0:33,0:33:75.20:0,75,1034	0/0:36,0:36:90.10:0,90,1353	0/0:37,0:37:93.31:0,93,1382	0/0:16,0:16:30.07:0,30,409	0/0:24,0:24:48.15:0,48,703	0/0:35,0:35:93.29:0,93,1353	0/0:27,0:27:63.21:0,63,947	0/0:28,0:28:63.21:0,63,948	0/0:27,0:27:66.20:0,66,952	0/0:27,0:27:63.19:0,63,925	0/0:24,0:24:63.19:0,63,917	0/0:21,0:21:48.13:0,48,681	0/0:24,0:24:48.16:0,48,722	0/0:29,0:28:66.22:0,66,994	0/0:18,0:18:23.70:0,24,361	0/0:18,0:18:33.02:0,33,485	0/0:25,0:25:54.17:0,54,791	1/1:4,12:17:33.11:694,33,0	0/0:40,0:40:96.32:0,96,1426	0/0:34,0:33:72.23:0,72,1064	0/0:11,0:11:24.08:0,24,361
chr10	105087807	.	T	TACCCCAAGA	2084.92	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.727;DP=601;FS=6.400;HRun=0;HaplotypeScore=158.8947;InbreedingCoeff=0.9670;MQ=74.92;MQ0=3;MQRankSum=-7.169;QD=54.87;ReadPosRankSum=-1.141;VQSLOD=3.0721;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,3724	0/0:11,0:11:33.10:0,33,902	0/0:24,0:23:54.16:0,54,1429	0/0:27,0:26:69.46:0,69,1459	0/0:23,0:23:66.21:0,66,1953	1/1:4,10:14:33.08:1409,33,0	1/1:5,11:8:12.04:474,12,0	0/0:24,0:21:60.21:0,60,1713	0/0:19,0:18:54.15:0,54,1449	0/0:20,0:19:57.19:0,57,1629	0/0:18,0:17:51.18:0,51,1507	0/0:18,0:18:48.15:0,48,1384	0/0:21,0:21:60.19:0,60,1742	0/0:13,0:13:33.11:0,33,951	0/0:23,0:23:66.23:0,66,2021	0/0:23,0:22:66.21:0,66,1933	0/0:26,0:26:78.24:0,78,2175	0/0:14,0:14:42.13:0,42,1211	0/0:29,0:29:78.27:0,78,2311	0/0:28,0:28:84.27:0,84,2442	0/0:40,0:39:99:0,99,2942	0/0:21,0:20:54.19:0,54,1651	0/0:19,0:19:54.19:0,54,1634	0/0:14,0:14:39.12:0,39,1125	1/1:3,1:4:9.03:335,9,0	0/0:32,0:32:93.31:0,93,2680	0/0:21,0:21:57.20:0,57,1745	0/0:10,0:10:30.09:0,30,851
chr10	105088303	.	TAC	T	223.17	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.197;DP=680;FS=2.907;HRun=0;HaplotypeScore=86.5335;InbreedingCoeff=0.9091;MQ=63.44;MQ0=3;MQRankSum=-3.304;QD=7.97;ReadPosRankSum=-0.586;VQSLOD=3.1973;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:82.52:0,83,1368	0/0:11,0:11:33.07:0,33,525	0/0:23,0:15:34.01:0,34,494	0/0:21,1:16:32.60:0,33,481	0/0:26,0:26:72.25:0,72,1201	1/1:4,1:5:3.01:39,3,0	1/1:0,6:6:12.04:154,12,0	0/0:31,0:30:75.09:0,75,1070	0/0:32,0:32:93.26:0,93,1475	0/0:40,0:40:99:0,102,1662	0/0:28,0:28:69.24:0,69,1162	0/0:19,0:19:54.18:0,54,909	0/0:26,0:26:75.22:0,75,1201	0/0:20,0:20:57.20:0,57,961	0/0:37,0:37:99:0,105,1757	0/0:28,0:28:78.27:0,78,1315	0/0:19,0:19:45.14:0,45,732	0/0:18,0:18:51.03:0,51,767	0/0:21,0:20:54.15:0,54,858	0/0:27,0:27:78.27:0,78,1314	0/0:56,0:56:99:0,156,2546	0/0:10,0:10:27.09:0,27,455	0/0:21,0:21:45.14:0,45,715	0/0:20,0:20:60.12:0,60,926	1/1:5,12:12:12.04:154,12,0	0/0:33,0:33:90.31:0,90,1518	0/0:33,0:33:55.56:0,56,1422	0/0:18,0:18:42.12:0,42,680
chr10	105090300	.	T	TC	347.29	PASS	AB=0.885;AC=7;AF=0.125;AN=56;BaseQRankSum=4.023;DP=510;FS=24.898;HRun=0;HaplotypeScore=59.9843;InbreedingCoeff=0.5178;MQ=36.35;MQ0=96;MQRankSum=1.671;QD=5.51;ReadPosRankSum=2.130;VQSLOD=1.5910;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:25:46.05:0,46,462	0/0:10,0:6:13.81:0,14,70	1/1:16,0:2:2.51:6,3,0	0/0:9,0:2:3.01:0,3,32	0/0:39,0:31:58.05:0,58,604	1/1:10,1:9:23.93:233,24,0	1/1:9,4:9:0.90:112,1,0	0/0:15,0:9:3.37:0,3,155	0/0:25,0:22:55.96:0,56,492	0/0:22,0:19:51.73:0,52,437	0/0:17,0:12:23.99:0,24,257	0/0:16,0:15:26.83:0,27,228	0/0:18,0:18:35.71:0,36,269	0/0:16,0:14:31.79:0,32,240	0/0:20,0:20:37.59:0,38,344	0/0:16,0:16:37.50:0,37,334	0/0:16,0:10:23.97:0,24,286	0/0:17,0:15:25.44:0,25,268	0/0:22,0:12:22.67:0,23,201	0/0:14,0:9:17.55:0,18,133	0/0:8,0:3:6.02:0,6,81	0/0:25,0:18:32.97:0,33,360	0/0:17,0:13:30.27:0,30,261	0/0:18,0:14:17.93:0,18,185	0/1:20,3:13:16.96:116,0,17	0/0:27,0:20:56.92:0,57,632	0/0:18,0:8:13.18:0,13,110	0/0:7,0:2:3.01:0,3,40
chr10	105092672	.	A	ATT	788.50	PASS	AC=6;AF=0.120;AN=50;BaseQRankSum=6.335;DP=480;FS=5.495;HRun=6;HaplotypeScore=35.4496;InbreedingCoeff=0.6692;MQ=44.69;MQ0=11;MQRankSum=2.086;QD=16.43;ReadPosRankSum=0.425;VQSLOD=-0.3740;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:3.01:0,3,37	0/0:7,0:7:6.02:0,6,73	0/0:6,0:2:3.01:0,3,36	./.	0/0:19,0:18:9.02:0,9,110	1/1:1,25:27:39.13:659,39,0	1/1:2,7:9:6.02:101,6,0	0/0:31,0:23:54.12:0,54,624	0/0:18,0:18:24.08:0,24,293	0/0:32,0:31:84.19:0,84,994	0/0:25,0:24:27.08:0,27,329	0/0:17,0:17:24.08:0,24,293	0/0:11,0:11:6.02:0,6,73	0/0:18,0:18:18.03:0,18,219	0/0:17,0:17:12.04:0,12,146	0/0:19,0:18:21.06:0,21,255	0/0:23,0:22:6.02:0,6,73	0/0:12,0:12:12.04:0,12,146	0/0:11,0:10:30.08:0,30,346	0/0:32,0:32:45.13:0,45,546	0/0:7,0:7:6.02:0,6,73	0/0:21,0:20:24.06:0,24,279	0/0:15,0:15:12.04:0,12,146	./.	1/1:1,11:12:9.03:152,9,0	0/0:29,0:28:81.24:0,81,970	0/0:32,0:32:32.93:0,33,379	./.
chr10	105092800	.	C	CT	1338.48	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-4.348;DP=563;FS=23.874;HRun=5;HaplotypeScore=49.7105;InbreedingCoeff=0.9776;MQ=56.27;MQ0=2;MQRankSum=0.526;QD=27.89;ReadPosRankSum=0.376;VQSLOD=1.7024;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.16:0,63,677	0/0:8,0:8:18.04:0,18,193	0/0:16,0:5:15.04:0,15,161	0/0:11,0:7:12.01:0,12,119	0/0:31,0:31:78.19:0,78,837	1/1:0,14:14:42.14:552,42,0	1/1:0,9:6:18.02:217,18,0	0/0:26,0:26:66.11:0,66,679	0/0:24,0:24:66.16:0,66,709	0/0:20,0:20:51.10:0,51,536	0/0:18,0:18:39.07:0,39,403	0/0:24,0:24:72.18:0,72,773	0/0:13,0:13:39.10:0,39,419	0/0:16,0:16:39.10:0,39,419	0/0:17,0:17:51.13:0,51,548	0/0:21,0:21:60.15:0,60,644	0/0:26,0:26:69.16:0,69,733	0/0:17,0:17:42.10:0,42,451	0/0:13,0:13:33.08:0,33,355	0/0:33,0:33:84.20:0,84,902	0/0:26,0:26:72.18:0,72,774	0/0:19,0:19:57.14:0,57,613	0/0:21,0:21:60.15:0,60,644	0/0:19,0:19:54.13:0,54,580	1/1:0,25:21:54.18:710,54,0	0/0:28,0:27:72.18:0,72,773	0/0:30,0:30:81.20:0,81,870	0/0:15,0:15:45.11:0,45,484
chr10	105094315	.	C	CCT	64.01	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.005;DP=700;FS=1.156;HRun=0;HaplotypeScore=120.4896;InbreedingCoeff=0.9008;MQ=54.80;MQ0=29;MQRankSum=-0.263;QD=1.19;ReadPosRankSum=-1.461;VQSLOD=2.3067;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:68.14:0,68,965	0/0:21,0:17:51.17:0,51,739	0/0:27,0:13:36.12:0,36,515	0/0:39,0:21:36.71:0,37,555	0/0:22,0:22:48.14:0,48,702	1/1:16,0:16:12.22:86,12,0	1/1:23,0:21:5.37:48,5,0	0/0:32,0:28:78.25:0,78,1130	0/0:32,0:30:60.54:0,61,779	0/0:25,0:25:66.22:0,66,969	0/0:13,0:13:30.54:0,31,443	0/0:23,0:23:57:0,57,719	0/0:28,0:28:63.05:0,63,856	0/0:30,0:28:53.96:0,54,724	0/0:30,0:30:66.12:0,66,925	0/0:28,0:28:57.14:0,57,796	0/0:15,0:15:36.12:0,36,528	0/0:33,0:32:81.13:0,81,1117	0/0:20,0:16:41.61:0,42,617	0/0:19,0:19:54.18:0,54,755	0/0:37,0:37:87.29:0,87,1256	0/0:28,0:28:72.22:0,72,1055	0/0:28,0:28:78.23:0,78,1106	0/0:22,0:22:48.13:0,48,673	1/1:6,9:14:6.12:51,6,0	0/0:27,0:27:78.26:0,78,1142	0/0:18,0:16:45.15:0,45,651	0/0:9,0:9:18.06:0,18,265
chr10	105094522	.	G	GTA	4151.69	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-5.268;DP=881;FS=3.915;HRun=0;HaplotypeScore=107.6243;InbreedingCoeff=0.9959;MQ=57.13;MQ0=4;MQRankSum=-2.548;QD=39.17;ReadPosRankSum=1.208;VQSLOD=5.7173;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:57.19:0,57,759	0/0:13,0:13:24.08:0,24,320	0/0:19,0:7:17.89:0,18,203	0/0:25,0:14:39.12:0,39,484	0/0:16,0:16:30.10:0,30,399	1/1:0,32:32:63.22:1091,63,0	1/1:1,32:33:75.26:1298,75,0	0/0:55,0:55:99:0,147,1930	0/0:40,0:40:99:0,108,1437	0/0:39,0:38:99:0,105,1387	0/0:15,0:15:38.99:0,39,518	0/0:52,0:52:99:0,138,1836	0/0:53,0:53:99:0,150,1998	0/0:41,0:41:99:0,111,1430	0/0:63,0:63:99:0,178,2309	0/0:34,0:34:90.30:0,90,1198	0/0:16,0:16:33.11:0,33,439	0/0:18,0:18:51.13:0,51,660	0/0:14,0:12:33.10:0,33,425	0/0:29,0:29:81.26:0,81,1073	0/0:49,0:49:99:0,138,1803	0/0:24,0:24:57.19:0,57,759	0/0:26,0:26:51.13:0,51,678	0/0:23,0:23:48.16:0,48,639	1/1:1,40:41:99:1763,102,0	0/0:37,0:37:99:0,108,1429	0/0:31,0:31:78.26:0,78,1038	0/0:16,0:16:42.14:0,42,559
chr10	105094902	.	T	TC	439.84	PASS	AB=0.696;AC=5;AF=0.089;AN=56;BaseQRankSum=9.293;DP=646;FS=10.047;HRun=1;HaplotypeScore=72.1260;InbreedingCoeff=0.7673;MQ=53.13;MQ0=3;MQRankSum=-8.854;QD=7.58;ReadPosRankSum=1.992;VQSLOD=0.0911;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:65:99:0,190,2571	0/0:12,0:12:30.10:0,30,419	0/0:33,0:4:12.03:0,12,136	0/0:22,0:2:2.92:0,3,17	0/0:24,0:24:66.19:0,66,886	0/1:9,7:12:5.51:63,0,6	1/1:5,18:18:38.44:252,38,0	0/0:28,0:28:80.29:0,80,1079	0/0:18,0:18:48.16:0,48,670	0/0:25,0:25:72.23:0,72,978	0/0:16,0:16:33.10:0,33,447	0/0:25,0:25:72.23:0,72,992	0/0:22,0:22:63.21:0,63,880	0/0:17,0:17:51.17:0,51,713	0/0:17,0:17:48.15:0,48,657	0/0:17,0:17:51.16:0,51,698	0/0:46,0:46:99:0,123,1716	0/0:22,0:21:57.13:0,57,757	0/0:20,0:20:60.16:0,60,790	0/0:23,0:23:51.15:0,51,678	0/0:28,0:28:69.23:0,69,965	0/0:13,0:13:33.10:0,33,444	0/0:24,0:24:51.06:0,51,680	0/0:18,0:18:33.07:0,33,437	1/1:4,15:18:27.82:255,28,0	0/0:29,0:29:84.28:0,84,1169	0/0:12,0:11:27.09:0,27,377	0/0:12,0:12:27.09:0,27,378
chr10	105094903	.	T	TCTC	1263.55	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.365;DP=635;FS=8.356;HRun=0;HaplotypeScore=90.9355;InbreedingCoeff=0.8681;MQ=53.19;MQ0=3;MQRankSum=-8.515;QD=22.56;ReadPosRankSum=1.613;VQSLOD=3.0278;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,178,3199	0/0:12,0:12:30.10:0,30,559	0/0:33,0:4:12.02:0,12,164	0/0:22,0:2:3.01:0,3,54	0/0:23,0:23:63.20:0,63,1106	1/1:8,7:11:3.35:169,3,0	1/1:4,17:17:39.13:571,39,0	0/0:28,0:28:84.21:0,84,1380	0/0:18,0:18:51.14:0,51,848	0/0:24,0:24:72.23:0,72,1266	0/0:15,0:15:33.10:0,33,570	0/0:25,0:25:72.23:0,72,1305	0/0:22,0:22:63.22:0,63,1153	0/0:17,0:17:51.17:0,51,948	0/0:16,0:16:48.13:0,48,858	0/0:17,0:17:51.17:0,51,907	0/0:47,0:47:99:0,123,2235	0/0:22,0:21:57.12:0,57,993	0/0:19,0:19:57.16:0,57,976	0/0:22,0:22:48.15:0,48,820	0/0:28,0:28:69.24:0,69,1280	0/0:13,0:13:33.11:0,33,587	0/0:22,0:22:48.15:0,48,861	0/0:19,0:19:36.04:0,36,571	1/1:4,15:18:45.13:655,45,0	0/0:30,0:30:87.27:0,87,1486	0/0:12,0:11:27.09:0,27,489	0/0:12,0:12:27.09:0,27,487
chr10	105095842	.	G	GA	1868.60	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.109;DP=596;FS=0.000;HRun=5;HaplotypeScore=75.4570;InbreedingCoeff=0.9905;MQ=69.12;MQ0=1;MQRankSum=-0.694;QD=33.37;ReadPosRankSum=-1.250;VQSLOD=3.4806;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1225	0/0:7,0:7:17.24:0,17,104	0/0:14,0:14:36.01:0,36,371	0/0:19,0:18:39.57:0,40,415	0/0:16,0:16:45.11:0,45,484	1/1:0,16:16:48.11:612,48,0	1/1:4,16:20:48.16:629,48,0	0/0:30,0:30:53.49:0,53,368	0/0:26,0:26:69.17:0,69,741	0/0:17,0:17:42.10:0,42,451	0/0:15,0:15:39.10:0,39,419	0/0:23,0:23:63.11:0,63,663	0/0:24,0:24:66.16:0,66,709	0/0:19,0:19:57.14:0,57,613	0/0:27,0:27:63.14:0,63,669	0/0:32,0:32:84.21:0,84,903	0/0:28,0:28:81.20:0,81,871	0/0:26,0:26:75.16:0,75,796	0/0:25,0:24:56.48:0,56,282	0/0:22,0:22:63.47:0,63,339	0/0:18,0:18:19.02:0,19,170	0/0:19,0:19:54.12:0,54,572	0/0:14,0:14:39.10:0,39,419	0/0:20,0:20:60.13:0,60,635	1/1:0,20:20:60.15:770,60,0	0/0:27,0:27:75.18:0,75,800	0/0:15,0:15:16.96:0,17,191	0/0:18,0:18:54.14:0,54,580
chr10	105096284	.	G	GA	2505.25	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.153;DP=708;FS=0.000;HRun=1;HaplotypeScore=62.3715;InbreedingCoeff=0.9995;MQ=59.87;MQ0=2;MQRankSum=-4.102;QD=30.93;ReadPosRankSum=-0.468;VQSLOD=3.0909;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,1616	0/0:12,0:12:36.12:0,36,463	0/0:14,0:10:27.03:0,27,321	0/0:16,0:13:39.11:0,39,474	0/0:15,0:15:45.15:0,45,584	1/1:0,23:22:54.18:808,54,0	1/1:4,34:35:75.25:1122,75,0	0/0:30,0:30:90.26:0,90,1140	0/0:16,0:16:48.16:0,48,623	0/0:27,0:27:78.25:0,78,1013	0/0:17,0:17:51.17:0,51,661	0/0:34,0:34:99:0,99,1285	0/0:26,0:26:72.23:0,72,934	0/0:25,0:25:69.19:0,69,865	0/0:35,0:35:99:0,105,1363	0/0:37,0:37:99:0,108,1399	0/0:36,0:36:99:0,105,1363	0/0:17,0:17:48.16:0,48,622	0/0:25,1:24:66.20:0,66,843	0/0:19,0:19:57.16:0,57,711	0/0:30,0:30:87.28:0,87,1130	0/0:12,0:12:36.10:0,36,451	0/0:24,0:24:66.21:0,66,849	0/0:48,0:48:99:0,144,1838	1/1:0,20:20:48.16:718,48,0	0/0:28,0:28:81.26:0,81,1051	0/0:22,0:22:66.18:0,66,838	0/0:17,0:17:51.17:0,51,661
chr10	105096932	.	GGATAAAAACTTAGA	G	11894.18	PASS	AB=0.627;AC=14;AF=0.250;AN=56;BaseQRankSum=15.071;DP=578;FS=12.640;HRun=0;HaplotypeScore=229.3079;InbreedingCoeff=0.7901;MQ=81.54;MQ0=0;MQRankSum=-13.005;QD=81.47;ReadPosRankSum=0.592;VQSLOD=3.2645;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,7896	0/0:4,0:4:12.04:0,12,828	0/0:34,0:34:99:0,99,5833	0/0:23,0:23:60.21:0,60,3900	0/0:22,0:22:63.22:0,63,4362	1/1:4,21:25:57.20:2464,57,0	1/1:3,13:16:33.11:1427,33,0	0/1:16,18:34:99:1797,0,132	0/0:22,0:22:60.20:0,60,3881	0/0:23,0:23:69.24:0,69,4782	0/0:20,0:20:57.20:0,57,3678	0/0:19,0:19:54.19:0,54,3476	0/0:21,0:21:63.22:0,63,4316	0/0:25,0:25:75.24:0,75,4915	0/0:30,0:30:87.28:0,87,5652	0/0:35,0:35:99:0,105,7099	0/0:28,0:27:81.28:0,81,5542	0/0:15,0:15:42.14:0,42,2843	1/1:5,8:13:24.04:752,24,0	0/1:4,8:12:99:1010,0,125	1/1:2,4:6:8.18:295,8,0	0/0:16,0:16:48.15:0,48,2909	0/0:13,0:13:39.13:0,39,2742	0/0:15,0:15:45.15:0,45,3100	1/1:2,13:15:39.13:1686,39,0	0/0:14,0:14:42.14:0,42,2410	1/1:6,19:24:57.20:2463,57,0	0/0:12,0:12:36.12:0,36,2312
chr10	105097526	.	C	CA	4181.79	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.082;DP=530;FS=9.792;HRun=3;HaplotypeScore=65.3658;InbreedingCoeff=0.9919;MQ=90.75;MQ0=1;MQRankSum=-2.514;QD=43.56;ReadPosRankSum=-1.443;VQSLOD=1.4925;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1524	0/0:8,0:8:12.04:0,12,165	0/0:25,0:25:44.27:0,44,617	0/0:28,0:27:24.98:0,25,563	0/0:17,0:17:51.17:0,51,711	0/0:15,0:15:45.15:0,45,628	0/0:17,0:17:51.10:0,51,668	1/1:0,23:22:63.21:1003,63,0	0/0:21,0:21:63.21:0,63,877	0/0:21,0:21:63.14:0,63,821	0/0:16,0:16:48.15:0,48,654	0/0:16,0:16:48.12:0,48,648	0/0:19,0:19:57.18:0,57,774	0/0:15,0:15:42.14:0,42,583	0/0:15,0:15:45.06:0,45,584	0/0:15,0:15:45.15:0,45,624	0/0:25,0:25:75.25:0,75,1044	0/0:21,0:21:54.11:0,54,726	1/1:0,12:12:33.10:500,33,0	1/1:0,13:13:39.13:622,39,0	1/1:2,24:26:66.23:1054,66,0	0/0:13,0:13:36.12:0,36,495	0/0:14,0:14:41.64:0,42,524	0/0:16,0:16:44.66:0,45,606	0/0:22,0:22:60.19:0,60,818	0/0:30,0:30:90.28:0,90,1225	1/1:0,21:22:63.21:1001,63,0	0/0:8,0:8:24.08:0,24,334
chr10	105097819	.	T	TACCTCC	397.60	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.922;DP=650;FS=6.398;HRun=0;HaplotypeScore=131.7733;InbreedingCoeff=0.9810;MQ=74.69;MQ0=0;MQRankSum=-4.010;QD=49.70;ReadPosRankSum=-3.101;VQSLOD=2.6657;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.24:0,69,1476	1/1:1,6:8:15.05:486,15,0	0/0:31,0:31:66.23:0,66,1412	0/0:25,0:25:48.03:0,48,993	0/0:21,0:21:54.17:0,54,1128	0/0:18,0:18:51.17:0,51,1089	0/0:36,0:36:78.26:0,78,1666	0/0:19,0:19:45.15:0,45,944	0/0:31,0:31:84.29:0,84,1827	0/0:16,0:16:39.13:0,39,818	0/0:14,0:14:39.13:0,39,855	0/0:17,0:17:36.12:0,36,786	0/0:27,0:27:66.23:0,66,1429	0/0:25,0:25:66.22:0,66,1384	0/0:29,0:29:69.24:0,69,1474	0/0:23,0:23:57.19:0,57,1201	0/0:29,0:29:63.20:0,63,1315	0/0:29,0:29:66.17:0,66,1361	0/0:25,0:25:62.17:0,62,1220	0/0:13,0:13:36.12:0,36,790	0/0:54,0:54:99:0,138,2914	0/0:18,0:18:42.14:0,42,897	0/0:11,0:11:24.08:0,24,509	0/0:33,0:33:75.24:0,75,1553	0/0:15,0:15:45.15:0,45,948	0/0:17,0:17:48.16:0,48,1048	0/0:27,0:27:69.24:0,69,1489	0/0:12,0:12:29.21:0,29,656
chr10	105098628	.	AGAT	A	1687.49	PASS	AB=0.971;AC=15;AF=0.288;AN=52;BaseQRankSum=9.177;DP=695;FS=2.771;HRun=0;HaplotypeScore=96.8479;InbreedingCoeff=0.8605;MQ=70.35;MQ0=5;MQRankSum=0.270;QD=9.64;ReadPosRankSum=1.078;VQSLOD=3.3582;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:30:21.30:0,21,1005	1/1:8,4:12:6.02:78,6,0	./.	./.	0/0:31,0:31:42.13:0,42,756	1/1:6,10:16:27.09:350,27,0	1/1:17,9:26:18.06:233,18,0	0/0:42,0:42:0:0,0,0	0/0:29,0:29:42.14:0,42,792	0/1:32,1:33:2.77:3,0,554	0/0:15,0:15:12.04:0,12,228	0/0:26,0:26:45.15:0,45,851	0/0:25,0:25:42.14:0,42,797	0/0:22,0:22:42.14:0,42,795	0/0:26,0:26:39.13:0,39,737	0/0:24,0:24:39.13:0,39,739	0/0:26,0:26:54.18:0,54,1009	0/0:27,0:27:36.12:0,36,681	1/1:16,2:17:6.02:78,6,0	1/1:9,8:17:24.08:311,24,0	1/1:14,18:32:39.13:505,39,0	0/0:14,0:14:18.06:0,18,332	0/0:20,0:20:21.07:0,21,398	0/0:34,0:34:48.16:0,48,888	1/1:12,9:21:24.08:311,24,0	0/0:29,0:29:36.12:0,36,679	0/0:25,0:25:30.07:0,30,499	0/0:16,0:16:30.10:0,30,555
chr10	105100416	.	CGT	C	562.78	PASS	AB=0.912;AC=28;AF=0.560;AN=50;BaseQRankSum=6.116;DP=563;FS=0.676;HRun=0;HaplotypeScore=94.2343;InbreedingCoeff=-0.3951;MQ=68.86;MQ0=4;MQRankSum=-0.454;QD=1.31;ReadPosRankSum=2.096;VQSLOD=1.4656;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:38,2:39:36.08:36,0,280	0/1:6,2:8:26.34:57,0,26	./.	./.	0/1:21,0:21:17.35:17,0,150	1/1:22,0:22:2.92:17,3,0	1/1:19,0:19:2.37:14,2,0	./.	0/1:15,0:15:23.02:23,0,80	0/1:27,2:29:44.69:45,0,126	0/1:21,1:22:11.78:12,0,246	0/1:15,2:17:35.56:36,0,316	0/0:15,0:15:17.92:0,18,268	0/1:11,2:13:41.57:42,0,239	0/1:13,5:18:65.45:65,0,266	0/1:8,2:11:56.96:57,0,137	0/1:26,5:33:99:115,0,547	0/0:16,0:16:19.88:0,20,270	1/1:18,0:18:5.34:23,5,0	1/1:14,0:14:5.68:28,6,0	1/1:30,0:30:2.84:14,3,0	0/1:11,0:12:8.71:9,0,228	0/1:15,1:16:11.76:12,0,245	0/1:26,3:28:20.58:21,0,492	1/1:8,0:8:5.69:28,6,0	0/0:21,0:21:3.89:0,4,29	0/1:10,0:10:5.92:6,0,7	0/1:22,2:24:35.60:36,0,299
chr10	105100441	.	GTGTGTGTGTGTGTGTGTA	G	997.12	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=7.051;DP=568;FS=10.804;HRun=0;HaplotypeScore=219.9194;InbreedingCoeff=0.3930;MQ=51.71;MQ0=13;MQRankSum=-3.123;QD=7.28;ReadPosRankSum=-0.486;VQSLOD=1.5102;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:84.41:0,84,4563	0/0:8,0:8:21.05:0,21,924	0/0:25,0:6:15.04:0,15,427	0/0:36,0:11:30.08:0,30,755	0/0:16,0:16:39.13:0,39,2393	1/1:0,18:18:3.01:156,3,0	1/1:4,19:23:8.74:281,9,0	0/1:21,0:20:99:107,0,750	0/0:13,0:13:33.05:0,33,1711	0/0:28,0:28:77.79:0,78,4059	0/0:23,0:23:55.85:0,56,3471	0/0:23,0:23:63.16:0,63,3606	0/0:14,0:14:42.10:0,42,2312	0/0:17,0:17:48:0,48,3142	0/0:24,0:24:63.18:0,63,3788	0/0:12,0:12:33.10:0,33,1809	0/0:41,0:41:99:0,116,6884	0/0:16,0:16:45.06:0,45,2412	0/1:16,0:15:16.90:17,0,582	0/1:16,0:16:12.52:13,0,208	0/1:24,0:24:11.77:12,0,41	0/0:17,0:17:45.11:0,45,2524	0/0:17,0:16:42.14:0,42,2701	0/0:32,0:31:75.26:0,75,5278	1/1:1,10:11:12.04:557,12,0	0/0:21,0:21:63.19:0,63,2343	0/1:8,0:8:0.85:1,0,176	0/0:12,0:12:33.11:0,33,2371
chr10	105100447	.	GTGTGTGTGTGTA	G	1836.58	PASS	AB=0.600;AC=15;AF=0.268;AN=56;BaseQRankSum=9.956;DP=557;FS=8.251;HRun=0;HaplotypeScore=163.1625;InbreedingCoeff=0.8214;MQ=54.00;MQ0=11;MQRankSum=-2.381;QD=15.18;ReadPosRankSum=-1.663;VQSLOD=1.9965;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:89.74:0,90,3034	0/0:8,0:8:21.02:0,21,561	0/0:23,0:6:18.01:0,18,265	0/0:35,0:12:33.55:0,34,507	0/0:16,0:16:39.10:0,39,1544	1/1:18,0:18:3.48:95,3,0	1/1:22,0:22:5.89:137,6,0	1/1:3,15:17:22.40:396,22,0	0/0:12,0:12:33.02:0,33,1129	0/0:21,0:21:60.13:0,60,2371	0/0:24,0:24:59.38:0,59,2285	0/0:22,0:22:60.15:0,60,2458	0/0:15,0:15:45:0,45,1582	0/0:16,0:16:44.97:0,45,2104	0/0:27,0:27:69.16:0,69,2534	0/0:13,0:13:36.08:0,36,1285	0/0:43,0:43:99:0,125,4701	0/0:18,0:18:50.84:0,51,1727	0/1:4,7:11:10.87:316,0,11	1/1:8,4:12:21:357,21,0	1/1:1,18:19:3.01:116,3,0	0/0:19,0:19:48.11:0,48,1811	0/0:17,0:16:42.11:0,42,1812	0/0:37,0:36:87.17:0,87,3699	1/1:11,0:11:12.04:309,12,0	0/0:18,0:18:54.13:0,54,1341	1/1:7,2:9:16.92:294,17,0	0/0:14,0:14:39.10:0,39,1692
chr10	105100865	.	T	TA	6439.37	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=9.321;DP=641;FS=4.066;HRun=2;HaplotypeScore=87.9053;InbreedingCoeff=0.9967;MQ=69.76;MQ0=4;MQRankSum=-1.834;QD=35.58;ReadPosRankSum=-1.077;VQSLOD=4.7847;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:98.84:0,99,1189	0/0:10,0:10:30.09:0,30,372	0/0:27,0:23:69.21:0,69,844	0/0:33,0:30:84.26:0,84,1040	0/0:21,0:21:57.17:0,57,693	1/1:3,18:21:54.06:771,54,0	1/1:0,27:27:72.24:1036,72,0	1/1:3,21:22:57.14:763,57,0	0/0:27,0:27:81.22:0,81,966	0/0:18,0:18:54.17:0,54,669	0/0:12,0:12:27.56:0,28,335	0/0:28,0:28:81.23:0,81,978	0/0:20,0:20:60.13:0,60,724	0/0:22,0:22:60.19:0,60,743	0/0:26,0:26:72.14:0,72,848	0/0:21,0:21:57.14:0,57,668	0/0:38,0:38:99:0,102,1218	0/0:37,0:37:99:0,105,1268	1/1:6,15:19:42.14:604,42,0	1/1:0,13:13:33.11:475,33,0	1/1:1,33:35:90.22:1240,90,0	0/0:13,0:12:33.10:0,33,409	0/0:5,0:5:15.05:0,15,186	0/0:33,0:33:87.23:0,87,1061	1/1:1,19:20:57.19:820,57,0	0/0:25,0:25:72.23:0,72,892	1/1:0,20:20:51.04:729,51,0	0/0:8,0:8:24.08:0,24,297
chr10	105100905	.	GGTGT	G	844.77	PASS	AB=0.950;AC=32;AF=0.800;AN=40;BaseQRankSum=1.076;DP=606;FS=0.000;HRun=0;HaplotypeScore=139.8918;InbreedingCoeff=0.2325;MQ=64.06;MQ0=16;MQRankSum=0.138;QD=2.12;ReadPosRankSum=0.634;VQSLOD=1.8563;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:29:2.74:28,3,0	./.	./.	./.	0/1:16,2:18:0:0,0,0	1/1:26,0:26:12.01:111,12,0	0/0:21,0:21:0:0,0,0	./.	1/1:25,1:27:5.07:72,5,0	1/1:20,0:22:4.56:32,5,0	1/1:10,0:10:3.01:45,3,0	1/1:19,0:18:6.01:91,6,0	./.	1/1:19,0:21:3:28,3,0	1/1:28,0:35:8.71:84,9,0	1/1:11,4:16:12.03:165,12,0	1/1:29,0:32:9.01:84,9,0	1/1:26,0:27:3.89:35,4,0	./.	0/0:10,0:10:0:0,0,0	0/1:45,0:42:0.24:0,0,0	1/1:10,0:12:3:28,3,0	./.	1/1:25,5:29:3:46,3,0	./.	0/0:22,0:22:1.72:0,2,4	1/1:16,0:16:3.47:28,3,0	1/1:9,1:10:3.01:46,3,0
chr10	105101861	.	A	AG	9139.56	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-0.493;DP=501;FS=9.291;HRun=1;HaplotypeScore=157.3070;InbreedingCoeff=0.7512;MQ=44.56;MQ0=14;MQRankSum=0.009;QD=20.91;ReadPosRankSum=-0.469;VQSLOD=3.8117;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,16:24:47.43:425,47,0	1/1:3,1:4:5.99:51,6,0	0/0:25,0:6:17.85:0,18,139	0/0:28,0:6:14.71:0,15,112	1/1:6,9:15:0.81:39,1,0	1/1:4,14:17:22.32:143,22,0	1/1:8,22:29:65.40:671,65,0	1/1:6,25:30:81.21:1083,81,0	1/1:2,16:18:17.61:250,18,0	1/1:1,17:18:51.13:673,51,0	1/1:2,7:9:8.52:84,9,0	1/1:6,12:17:31.72:364,32,0	1/1:8,9:16:38.82:461,39,0	1/1:8,11:18:41.87:412,42,0	1/1:4,14:17:31.42:349,31,0	1/1:5,15:19:34.68:407,35,0	1/1:14,16:29:51.42:654,51,0	1/1:6,10:16:41.89:493,42,0	1/1:5,8:12:24.07:313,24,0	0/0:5,4:11:0.88:0,1,2	1/1:1,7:7:11.93:101,12,0	1/1:5,9:14:23.56:249,24,0	1/1:6,9:15:19.34:162,19,0	1/1:5,15:21:17.59:161,18,0	1/1:3,12:15:27.22:205,27,0	1/1:7,19:26:72.04:911,72,0	1/1:5,8:12:32.95:379,33,0	1/1:1,4:5:11.87:99,12,0
chr10	105101862	.	GC	G	3813.19	PASS	AB=0.833;AC=51;AF=0.911;AN=56;BaseQRankSum=1.810;DP=482;FS=0.000;HRun=1;HaplotypeScore=167.2599;InbreedingCoeff=0.5939;MQ=45.02;MQ0=14;MQRankSum=1.385;QD=8.89;ReadPosRankSum=1.843;VQSLOD=1.0697;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,2:25:24.68:132,25,0	1/1:1,0:4:5.95:43,6,0	0/0:25,0:6:17.95:0,18,169	0/0:28,0:6:14.73:0,15,118	1/1:10,1:15:5.58:34,6,0	1/1:16,1:16:1.72:4,2,0	1/1:25,4:28:41.46:341,41,0	1/1:25,0:24:65.05:459,65,0	1/1:16,2:18:18.82:133,19,0	1/1:19,0:19:41.54:271,42,0	1/1:7,1:9:4.34:21,4,0	1/1:15,3:18:26.74:204,27,0	1/1:10,2:14:24.28:197,24,0	1/1:14,1:16:19.48:147,19,0	1/1:16,2:17:6.11:130,6,0	1/1:15,2:18:14.36:159,14,0	1/1:18,3:28:29.34:253,29,0	1/1:10,3:16:25.50:246,25,0	1/1:11,0:10:19.97:138,20,0	0/1:8,2:10:0:0,0,0	1/1:8,0:7:1.82:6,2,0	1/1:10,3:13:19.14:138,19,0	1/1:12,1:14:7.30:52,7,0	1/1:17,1:22:10.61:57,11,0	1/1:15,0:15:3.37:17,3,0	1/1:22,1:23:55.22:401,55,0	1/1:11,1:11:23.90:192,24,0	1/1:4,1:5:5.68:40,6,0
chr10	105101903	.	CACACACAG	C	719.43	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=5.373;DP=578;FS=1.168;HRun=0;HaplotypeScore=204.1579;InbreedingCoeff=0.4457;MQ=56.98;MQ0=14;MQRankSum=-4.496;QD=5.10;ReadPosRankSum=-1.524;VQSLOD=2.0377;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:32.10:0,32,645	0/1:5,0:5:19.07:19,0,37	0/0:33,0:19:52.94:0,53,471	0/0:37,0:21:29.69:0,30,344	0/0:20,0:20:35.92:0,36,385	1/1:13,3:15:10.68:119,11,0	1/1:21,6:26:43.41:363,43,0	0/1:23,0:22:99:191,0,246	0/0:19,0:19:50.95:0,51,956	0/0:32,0:31:58.40:0,58,1313	0/0:11,0:11:23.81:0,24,392	0/0:19,0:19:38.03:0,38,812	0/0:16,0:15:36.24:0,36,632	0/0:21,0:19:45.06:0,45,782	0/0:20,0:19:29.81:0,30,535	0/0:26,0:25:42.55:0,43,1122	0/0:29,0:27:61.82:0,62,1243	0/0:28,0:28:73.97:0,74,1274	0/1:12,0:12:55.37:55,0,223	1/1:16,0:16:9.85:67,10,0	0/1:8,0:8:12.49:12,0,53	0/0:16,0:16:33.04:0,33,598	0/0:22,0:20:36.29:0,36,423	0/0:32,0:32:51.88:0,52,680	1/1:18,0:18:5.41:45,5,0	0/0:20,0:20:54.57:0,55,964	0/1:16,0:15:15.35:15,0,164	0/0:3,0:3:9.02:0,9,141
chr10	105101924	.	GGAGACA	G	2299.75	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=9.237;DP=580;FS=7.156;HRun=0;HaplotypeScore=170.4241;InbreedingCoeff=0.9203;MQ=64.29;MQ0=7;MQRankSum=-9.190;QD=18.70;ReadPosRankSum=-3.173;VQSLOD=2.0179;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:51.18:0,51,1563	0/0:3,0:3:3.01:0,3,99	0/0:45,0:30:28.77:0,29,612	0/0:47,0:34:35.92:0,36,816	0/0:21,0:21:45.14:0,45,1264	1/1:5,8:13:14.70:301,15,0	1/1:18,6:24:17.85:252,18,0	1/1:15,8:23:27.09:564,27,0	0/0:20,0:20:42.01:0,42,1196	0/0:26,0:26:60.21:0,60,1941	0/0:13,0:13:18.06:0,18,577	0/0:24,0:24:41.77:0,42,1671	0/0:16,0:15:27.09:0,27,769	0/0:17,1:17:5.61:0,6,981	0/0:13,0:13:30.09:0,30,908	0/0:26,0:26:51.18:0,51,1636	0/0:29,0:27:45.15:0,45,1375	0/0:34,0:34:70.79:0,71,2090	1/1:8,4:12:12.04:253,12,0	1/1:2,16:18:17.92:340,18,0	./.	0/0:13,0:13:33.11:0,33,1083	0/0:18,0:18:39.13:0,39,1207	0/0:33,0:33:57.20:0,57,1754	1/1:5,13:18:12.03:216,12,0	0/0:13,0:13:30.10:0,30,980	1/1:4,11:15:27.08:563,27,0	0/0:5,0:5:10.19:0,10,370
chr10	105105485	.	CA	C	6301.63	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=9.889;DP=590;FS=3.472;HRun=2;HaplotypeScore=60.9938;InbreedingCoeff=0.9994;MQ=86.68;MQ0=0;MQRankSum=-2.871;QD=35.60;ReadPosRankSum=-1.212;VQSLOD=4.8522;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.26:0,81,1192	0/0:15,0:15:42.13:0,42,611	0/0:20,0:20:53.70:0,54,655	0/0:27,0:27:78.21:0,78,1053	0/0:19,0:19:57.19:0,57,854	1/1:0,19:19:48.16:623,48,0	1/1:0,29:29:81.26:1052,81,0	1/1:0,14:14:42.12:530,42,0	0/0:20,0:20:60.18:0,60,859	0/0:26,0:26:75.25:0,75,1106	0/0:9,0:9:27.09:0,27,401	0/0:22,0:22:66.21:0,66,968	0/0:19,0:19:57.19:0,57,851	0/0:24,0:24:69.22:0,69,1015	0/0:27,0:27:81.25:0,81,1174	0/0:19,0:19:57.19:0,57,854	0/0:38,0:38:99:0,114,1688	0/0:29,0:29:87.29:0,87,1299	1/1:0,23:23:69.19:866,69,0	1/1:1,14:15:42.14:545,42,0	1/1:0,29:29:84.27:1091,84,0	0/0:15,0:15:39.13:0,39,583	0/0:9,0:9:24.07:0,24,341	0/0:17,0:17:48.12:0,48,692	1/1:0,16:16:45.15:584,45,0	0/0:17,0:17:48.15:0,48,701	1/1:0,32:32:78.25:1010,78,0	0/0:14,0:14:42.14:0,42,622
chr10	105108221	.	C	CTA	801.74	PASS	AB=1.000;AC=11;AF=0.220;AN=50;BaseQRankSum=-0.691;DP=299;FS=0.922;HRun=0;HaplotypeScore=41.8112;InbreedingCoeff=0.3964;MQ=76.71;MQ0=6;MQRankSum=-3.847;QD=6.17;ReadPosRankSum=-4.081;VQSLOD=1.3325;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:22:29.91:0,30,324	0/0:2,0:2:5.61:0,6,46	0/1:27,0:16:1.66:2,0,4	0/1:50,0:21:8.45:8,0,36	0/0:6,0:6:9.03:0,9,106	0/1:3,0:3:38.99:39,0,63	0/0:5,0:5:9.03:0,9,108	1/1:27,4:28:39.12:572,39,0	0/0:4,0:4:9.03:0,9,109	0/0:6,0:6:6.01:0,6,64	0/0:3,0:3:3.01:0,3,36	0/0:7,0:7:15.02:0,15,157	0/0:3,0:3:3.01:0,3,36	0/0:7,0:7:6:0,6,60	0/0:4,0:4:3.01:0,3,36	0/0:4,0:4:6.02:0,6,72	0/0:33,0:33:53.72:0,54,611	0/0:26,0:29:66.03:0,66,773	1/1:9,0:5:9.03:130,9,0	1/1:4,0:4:3.01:46,3,0	./.	./.	./.	0/0:1,0:1:3.01:0,3,36	0/0:11,0:11:17.89:0,18,194	0/0:6,0:6:6:0,6,59	1/1:2,4:6:9.03:145,9,0	0/0:3,0:3:6.02:0,6,72
chr10	105108283	.	GTA	G	403.37	PASS	AC=8;AF=0.235;AN=34;BaseQRankSum=2.142;DP=292;FS=7.179;HRun=0;HaplotypeScore=35.7949;InbreedingCoeff=0.5086;MQ=57.17;MQ0=26;MQRankSum=-1.277;QD=4.53;ReadPosRankSum=-2.331;VQSLOD=0.4435;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:12.04:0,12,192	./.	1/1:52,0:10:2.55:12,3,0	0/0:105,0:14:4:0,4,14	./.	./.	./.	1/1:16,10:20:14.25:358,14,0	./.	0/0:1,0:1:3.01:0,3,50	0/0:1,0:1:2.94:0,3,18	0/0:2,0:2:6.01:0,6,78	0/0:3,0:3:3.01:0,3,51	0/0:2,0:2:5.97:0,6,63	0/0:1,0:1:3.01:0,3,51	0/0:1,0:1:3.01:0,3,51	0/0:34,1:35:35.89:0,36,1181	0/0:30,0:30:78.22:0,78,1272	1/1:3,2:4:6.02:75,6,0	./.	./.	./.	./.	./.	1/1:1,3:4:6.02:73,6,0	0/0:2,0:2:6.02:0,6,101	./.	0/0:6,0:5:12.04:0,12,202
chr10	105109707	.	C	CA	850.79	PASS	AB=0.870;AC=20;AF=0.357;AN=56;BaseQRankSum=-2.442;DP=640;FS=1.203;HRun=15;HaplotypeScore=111.7680;InbreedingCoeff=0.1482;MQ=67.22;MQ0=1;MQRankSum=-0.643;QD=2.31;ReadPosRankSum=-1.876;VQSLOD=0.0834;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:32,1:37:9.87:10,0,139	0/0:7,0:8:16.70:0,17,95	0/0:24,0:15:8.44:0,8,35	0/0:19,0:13:5.34:0,5,31	0/0:17,0:22:23.17:0,23,114	1/1:4,10:14:3:25,3,0	1/1:10,6:16:10.44:175,10,0	1/1:13,10:26:21.68:196,22,0	0/0:29,0:32:30.33:0,30,177	0/1:24,2:28:18.07:18,0,106	0/0:22,0:22:7.02:0,7,136	0/1:29,0:29:25.78:26,0,43	0/1:26,0:25:11.37:11,0,27	0/1:18,4:23:8.70:9,0,71	0/0:29,0:29:22.60:0,23,142	0/0:28,0:29:20.91:0,21,129	0/1:23,0:25:4.04:4,0,58	0/0:19,0:21:15.19:0,15,83	1/1:8,11:19:17.97:148,18,0	0/1:15,14:30:24.71:102,0,25	0/1:8,10:20:18.89:101,0,19	0/0:16,0:16:11.42:0,11,71	0/0:14,0:15:13.39:0,13,77	0/0:27,2:29:6.53:0,7,152	0/1:11,11:22:10.14:22,0,10	0/1:31,2:32:15.24:15,0,128	1/1:14,4:18:8.45:163,8,0	0/0:3,0:4:4.94:0,5,24
chr10	105114373	.	G	GCA	3161.59	PASS	AB=0.836;AC=10;AF=0.179;AN=56;BaseQRankSum=7.215;DP=789;FS=6.318;HRun=0;HaplotypeScore=122.0121;InbreedingCoeff=0.2217;MQ=62.22;MQ0=10;MQRankSum=0.090;QD=13.57;ReadPosRankSum=-2.653;VQSLOD=2.2907;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,1:51:97.65:0,98,1033	0/0:6,0:6:6.02:0,6,70	0/0:51,0:24:20.69:0,21,197	0/0:37,0:15:12.03:0,12,136	0/0:21,0:21:51.14:0,51,580	0/1:15,7:22:28.83:249,0,29	0/1:23,6:29:56.35:489,0,56	0/1:36,1:35:0.76:321,0,1	0/0:23,0:24:35.91:0,36,386	0/0:28,0:29:53.98:0,54,593	0/0:16,0:21:32.74:0,33,331	0/0:19,0:22:41.74:0,42,432	0/0:27,0:31:56.81:0,57,609	0/0:25,0:28:62.83:0,63,679	0/0:30,0:30:50.97:0,51,563	0/0:25,0:27:59.64:0,60,629	0/0:35,0:36:77.71:0,78,835	0/0:26,0:29:45.74:0,46,559	0/1:14,0:13:8.79:150,0,9	0/1:14,10:24:33.69:247,0,34	0/1:45,23:66:71.56:1193,0,72	0/0:18,0:18:34.34:0,34,384	0/0:15,0:15:24.07:0,24,280	0/0:35,0:41:80.16:0,80,853	1/1:14,15:29:4.46:434,4,0	0/0:19,0:22:50.80:0,51,544	1/1:5,5:10:0.30:217,0,0	0/0:14,0:14:36.11:0,36,419
chr10	105124314	.	GC	G	5174.02	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.009;DP=648;FS=3.903;HRun=6;HaplotypeScore=74.2301;InbreedingCoeff=0.9916;MQ=77.41;MQ0=0;MQRankSum=-0.999;QD=26.81;ReadPosRankSum=-0.882;VQSLOD=4.9628;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.24:0,84,1073	0/0:11,0:11:30.10:0,30,394	0/0:9,0:9:11.61:0,12,221	0/0:22,0:22:45.57:0,46,533	0/0:23,0:23:66.21:0,66,866	1/1:2,18:20:45.11:484,45,0	1/1:2,20:22:57.14:613,57,0	1/1:4,21:25:63.13:661,63,0	0/0:27,0:27:78.25:0,78,1018	0/0:20,0:20:57.18:0,57,745	0/0:11,0:11:33.09:0,33,413	0/0:35,0:35:99:0,105,1381	0/0:15,0:15:42.14:0,42,553	0/0:24,0:24:72.23:0,72,945	0/0:30,0:30:90.27:0,90,1155	0/0:13,0:13:39.13:0,39,513	0/0:43,0:43:99:0,123,1618	0/0:33,0:33:84.24:0,84,1087	1/1:2,14:16:42.10:451,42,0	1/1:0,18:18:51.13:548,51,0	1/1:2,44:46:99:1225,114,0	0/0:27,0:27:69.22:0,69,894	0/0:16,0:16:45.15:0,45,591	0/0:24,0:24:72.22:0,72,932	1/1:1,23:24:54.14:580,54,0	0/0:35,0:35:96.28:0,96,1218	1/1:2,20:22:57.13:612,57,0	0/0:7,0:7:15.05:0,15,195
chr10	105124493	.	G	GA	10457.17	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-18.565;DP=784;FS=6.502;HRun=1;HaplotypeScore=70.4885;InbreedingCoeff=0.9999;MQ=87.74;MQ0=0;MQRankSum=-2.295;QD=44.88;ReadPosRankSum=0.863;VQSLOD=4.4386;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,1929	0/0:10,0:10:30.10:0,30,418	0/0:29,0:29:87.28:0,87,1186	0/0:29,0:29:81.27:0,81,1118	0/0:29,0:29:84.28:0,84,1169	1/1:1,27:28:81.28:1295,81,0	1/1:0,28:27:81.28:1295,81,0	1/1:2,33:35:99:1583,99,0	0/0:20,0:20:60.20:0,60,839	0/0:35,0:35:99:0,105,1465	0/0:15,0:15:45.14:0,45,611	0/0:34,0:34:96.32:0,96,1341	0/0:25,0:25:75.23:0,75,1030	0/0:25,0:25:69.22:0,69,948	0/0:26,0:26:78.26:0,78,1088	0/0:13,0:13:39.13:0,39,542	0/0:29,0:29:87.29:0,87,1210	0/0:18,0:18:54.18:0,54,754	1/1:1,23:24:72.21:1103,72,0	1/1:0,29:29:81.28:1295,81,0	1/1:0,36:36:99:1679,105,0	0/0:31,0:31:90.26:0,90,1220	0/0:37,0:37:99:0,111,1551	0/0:43,0:43:99:0,129,1804	1/1:0,28:28:78.27:1247,78,0	0/0:33,0:33:99:0,99,1383	1/1:1,24:25:60.20:959,60,0	0/0:22,0:22:63.21:0,63,879
chr10	105125644	.	ATT	A	2589.74	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.580;DP=421;FS=4.808;HRun=10;HaplotypeScore=71.6807;InbreedingCoeff=0.9566;MQ=81.44;MQ0=5;MQRankSum=0.456;QD=20.72;ReadPosRankSum=-0.601;VQSLOD=2.6932;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.21:0,63,978	0/0:3,0:8:15.02:0,15,143	0/0:38,0:23:19.49:0,19,380	0/0:38,0:14:10.65:0,11,269	0/0:17,0:17:39.13:0,39,604	1/1:3,0:18:43.15:243,43,0	1/1:2,0:9:22.40:115,22,0	1/1:4,25:29:75.18:823,75,0	0/0:7,0:7:18.06:0,18,265	0/0:17,0:17:45.15:0,45,699	0/0:15,0:15:26.89:0,27,553	0/0:7,0:7:9.03:0,9,136	0/0:8,0:8:21.05:0,21,305	0/0:6,0:6:18.06:0,18,285	0/0:14,0:14:39.13:0,39,615	0/0:5,0:5:12.04:0,12,191	0/0:27,0:27:78.25:0,78,1210	0/0:13,0:13:29.59:0,30,437	1/1:3,7:10:21.01:222,21,0	1/1:2,17:19:54.13:593,54,0	1/1:2,4:6:12.02:134,12,0	0/0:5,0:5:12.03:0,12,165	0/0:10,0:10:21.07:0,21,332	0/0:8,0:8:15.05:0,15,236	1/1:4,0:17:42.70:232,43,0	0/0:16,0:16:39.13:0,39,615	1/1:2,15:17:39.09:434,39,0	0/0:15,0:15:45.14:0,45,693
chr10	105126283	.	G	GA	2932.30	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-6.452;DP=689;FS=14.952;HRun=8;HaplotypeScore=77.9352;InbreedingCoeff=0.9958;MQ=73.02;MQ0=0;MQRankSum=-1.602;QD=24.85;ReadPosRankSum=-3.015;VQSLOD=1.9136;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:34:43.40:0,43,652	0/0:16,0:16:45.02:0,45,412	0/0:19,0:19:20.95:0,21,214	0/0:19,0:17:15.89:0,16,201	0/0:25,0:25:63.02:0,63,575	0/0:28,0:28:78.04:0,78,713	0/0:29,0:29:78:0,78,703	1/1:5,22:27:66.19:753,66,0	0/0:32,0:32:78.04:0,78,714	0/0:25,0:25:33.84:0,34,489	0/0:15,0:15:45.01:0,45,407	0/0:22,0:22:60.02:0,60,544	0/0:25,0:25:66.02:0,66,601	0/0:20,0:20:42.01:0,42,384	0/0:32,0:32:90.05:0,90,824	0/0:30,0:30:63.02:0,63,577	0/0:32,0:32:90.05:0,90,824	0/0:24,0:24:66.03:0,66,604	1/1:7,17:25:53.99:603,54,0	1/1:3,23:26:66.15:747,66,0	1/1:4,12:16:30.09:346,30,0	0/0:19,0:19:51.03:0,51,467	0/0:21,0:21:51.01:0,51,462	0/0:33,0:33:81.01:0,81,736	0/0:22,0:22:51:0,51,462	0/0:30,0:30:81.04:0,81,741	1/1:4,20:24:57.17:658,57,0	0/0:17,0:17:45.01:0,45,412
chr10	105126699	.	AGAAG	A	1552.67	PASS	AB=1.000;AC=22;AF=0.458;AN=48;BaseQRankSum=2.607;DP=685;FS=0.615;HRun=0;HaplotypeScore=109.7383;InbreedingCoeff=-0.2156;MQ=51.13;MQ0=52;MQRankSum=-3.579;QD=3.04;ReadPosRankSum=-2.662;VQSLOD=1.7071;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:28:4.67:29,0,5	0/0:12,0:11:18.02:0,18,303	./.	./.	1/1:12,8:15:2.97:20,3,0	0/0:27,0:25:35.78:0,36,294	0/0:23,0:21:17.75:0,18,128	./.	0/1:31,0:29:16.97:71,0,17	0/1:29,0:23:58.97:213,0,59	1/1:15,0:12:2.96:19,3,0	0/1:29,0:22:35.92:93,0,36	0/1:23,0:22:43.38:62,0,43	0/1:28,0:25:33.95:85,0,34	0/1:38,0:31:98.97:99,0,181	0/1:26,0:24:57.66:188,0,58	0/1:44,0:40:58.62:59,0,73	0/1:30,0:27:12.24:12,0,631	0/1:24,0:20:21.03:21,0,128	0/1:27,0:26:62.56:72,0,63	0/0:21,0:15:8.83:0,9,60	0/0:26,0:26:36.11:0,36,632	0/0:11,0:11:15.03:0,15,231	0/1:43,0:35:37.01:109,0,37	1/1:20,7:24:17.42:221,17,0	1/1:27,0:25:19.04:324,19,0	0/1:19,0:18:9.62:10,0,77	./.
chr10	105126747	.	GGAAA	G	2837.64	PASS	AB=0.806;AC=30;AF=0.577;AN=52;BaseQRankSum=2.361;DP=806;FS=0.628;HRun=0;HaplotypeScore=75.3739;InbreedingCoeff=0.1648;MQ=28.94;MQ0=215;MQRankSum=-3.210;QD=4.40;ReadPosRankSum=0.976;VQSLOD=1.5658;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,2:18:31.70:85,0,32	0/0:11,0:7:15.05:0,15,229	./.	./.	1/1:32,0:16:2.81:16,3,0	0/0:28,0:20:36.04:0,36,514	0/0:25,0:11:11.96:0,12,142	1/1:35,0:21:1.72:5,2,0	1/1:18,14:20:6.02:110,6,0	0/1:29,13:16:77.03:416,0,77	1/1:15,4:8:3.01:37,3,0	0/1:27,9:14:41.48:152,0,41	0/1:24,7:17:44.65:98,0,45	1/1:21,12:18:9.03:153,9,0	0/1:30,10:19:97.56:201,0,98	0/1:18,10:16:66.68:309,0,67	0/1:37,15:29:34.73:108,0,35	0/0:40,0:22:10.67:0,11,494	1/1:23,0:17:0.93:85,1,0	1/1:24,3:19:12.36:167,12,0	1/1:35,0:12:12.75:72,13,0	0/0:25,0:18:33.10:0,33,460	0/0:14,0:10:12.02:0,12,140	0/1:39,12:23:36.77:208,0,37	1/1:36,0:18:20.56:126,21,0	1/1:33,9:26:15.15:588,15,0	1/1:14,2:13:4.26:71,4,0	0/0:15,3:6:0:0,0,0
chr10	105126755	.	GGAAA	G	446.40	PASS	AB=0.988;AC=17;AF=0.327;AN=52;BaseQRankSum=7.837;DP=816;FS=5.198;HRun=0;HaplotypeScore=81.9039;InbreedingCoeff=-0.2103;MQ=27.76;MQ0=232;MQRankSum=-1.591;QD=0.83;ReadPosRankSum=3.272;VQSLOD=1.1747;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:19:17.07:0,17,241	0/0:9,0:6:15.05:0,15,265	./.	./.	1/1:33,0:16:2.82:16,3,0	0/0:27,0:19:36.09:0,36,514	0/0:23,0:6:2.88:0,3,18	0/0:28,0:17:39.42:0,39,412	0/1:34,0:21:25.12:25,0,41	0/1:44,0:16:33.70:34,0,327	0/0:21,0:10:0:0,0,0	0/1:35,0:14:32.80:33,0,103	0/1:32,0:18:20.85:21,0,93	0/1:37,0:20:18.62:19,0,255	0/1:47,0:24:3.29:3,0,293	0/1:30,0:17:62.33:62,0,107	0/1:54,0:30:12.47:12,0,204	0/0:36,3:20:30.83:0,31,388	0/1:18,4:15:88.41:88,0,192	0/1:25,0:17:43.80:149,0,44	1/1:34,0:10:5.94:81,6,0	0/0:23,0:16:24.07:0,24,359	0/0:13,0:10:7.65:0,8,125	0/1:53,0:25:11.56:12,0,229	0/0:37,0:18:15.15:0,15,120	0/1:43,0:26:13.11:13,0,542	0/1:15,0:12:25.75:26,0,217	0/0:20,0:8:6.02:0,6,101
chr10	105127350	.	GC	G	5927.02	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.108;DP=600;FS=1.527;HRun=5;HaplotypeScore=58.6312;InbreedingCoeff=0.9998;MQ=88.84;MQ0=0;MQRankSum=-1.393;QD=30.55;ReadPosRankSum=0.274;VQSLOD=5.3177;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,1381	0/0:10,0:10:30.10:0,30,407	0/0:28,0:27:72.22:0,72,957	0/0:17,0:17:42.53:0,43,512	0/0:31,0:31:90.29:0,90,1214	1/1:3,25:28:75.21:850,75,0	1/1:1,14:15:39.11:442,39,0	1/1:2,20:22:57.16:646,57,0	0/0:16,0:16:48.16:0,48,652	0/0:21,0:21:60.16:0,60,775	0/0:14,0:14:33.11:0,33,449	0/0:16,0:16:48.15:0,48,640	0/0:19,0:19:57.19:0,57,779	0/0:17,0:17:51.17:0,51,697	0/0:14,0:14:42.14:0,42,574	0/0:13,0:13:39.13:0,39,532	0/0:35,0:35:99:0,105,1382	0/0:20,0:21:60.06:0,60,794	1/1:2,20:22:54.15:612,54,0	1/1:0,32:32:93.27:1054,93,0	1/1:0,13:13:36.10:408,36,0	0/0:16,0:16:45.15:0,45,606	0/0:20,0:20:60.20:0,60,818	0/0:17,0:17:51.15:0,51,666	1/1:2,29:31:87.16:970,87,0	0/0:30,0:30:90.28:0,90,1201	1/1:4,27:31:84.23:944,84,0	0/0:13,0:13:39.13:0,39,529
chr10	105128446	.	C	CTTTTTT	795.41	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.996;DP=650;FS=1.986;HRun=9;HaplotypeScore=126.0877;InbreedingCoeff=0.9083;MQ=72.25;MQ0=7;MQRankSum=-4.401;QD=16.57;ReadPosRankSum=-4.064;VQSLOD=-0.7057;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:92.79:0,93,1639	0/0:5,0:5:15.05:0,15,269	0/0:56,0:22:18.90:0,19,276	0/0:62,0:37:3.40:0,3,531	0/0:28,0:28:64.61:0,65,1036	1/1:3,7:11:12.04:262,12,0	1/1:5,8:15:12.04:276,12,0	0/0:27,0:27:71.79:0,72,1165	0/0:20,0:20:57.15:0,57,977	0/0:32,0:33:81:0,81,1319	0/0:25,0:25:62.77:0,63,1010	0/0:10,0:10:27.08:0,27,471	0/0:13,0:13:39.13:0,39,697	0/0:16,0:16:39:0,39,671	0/0:17,0:17:41.85:0,42,712	0/0:18,0:18:48.12:0,48,819	0/0:20,0:19:54.14:0,54,919	0/0:31,0:31:90.25:0,90,1579	0/0:18,0:17:48.15:0,48,838	0/0:29,0:29:75.07:0,75,1282	0/0:14,0:14:37.65:0,38,644	0/0:15,0:15:36.05:0,36,645	0/0:17,0:17:45.08:0,45,781	0/0:20,0:20:60.14:0,60,1020	1/1:3,19:22:18.03:391,18,0	0/0:25,0:25:69.17:0,69,1226	0/0:30,0:32:83.86:0,84,1371	0/0:9,0:9:17.96:0,18,314
chr10	105129099	.	T	TG	4101.67	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-13.840;DP=717;FS=8.470;HRun=6;HaplotypeScore=63.6902;InbreedingCoeff=0.9998;MQ=83.95;MQ0=0;MQRankSum=-1.124;QD=30.61;ReadPosRankSum=-2.183;VQSLOD=3.2460;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,144,1469	0/0:12,0:12:36.08:0,36,367	0/0:24,0:24:51.10:0,51,517	0/0:19,0:19:33.41:0,33,446	0/0:25,0:25:66.14:0,66,673	0/0:28,0:28:78.16:0,78,788	0/0:30,0:30:87.16:0,87,873	1/1:6,31:37:87.24:1064,87,0	0/0:23,0:23:63.14:0,63,643	0/0:38,0:38:99:0,102,1041	0/0:12,0:12:33.08:0,33,337	0/0:32,0:32:90.13:0,90,890	0/0:22,0:22:63.14:0,63,642	0/0:26,0:26:66.15:0,66,673	0/0:31,0:31:90.19:0,90,912	0/0:22,0:22:57.11:0,57,574	0/0:30,0:30:75.14:0,75,758	0/0:23,0:23:51.11:0,51,520	1/1:5,22:27:66.18:804,66,0	1/1:2,17:19:48.15:604,48,0	1/1:0,20:20:54.17:679,54,0	0/0:27,0:27:66.14:0,66,673	0/0:13,0:13:39.09:0,39,398	0/0:25,0:25:72.16:0,72,734	0/0:24,0:24:66.12:0,66,660	0/0:33,0:33:90.20:0,90,918	1/1:4,27:31:50.65:951,51,0	0/0:13,0:13:39.09:0,39,398
chr10	105129387	.	TCAC	T	710.58	PASS	AB=0.969;AC=10;AF=0.217;AN=46;BaseQRankSum=4.168;DP=414;FS=0.000;HRun=0;HaplotypeScore=63.3906;InbreedingCoeff=0.6709;MQ=56.64;MQ0=17;MQRankSum=0.331;QD=6.34;ReadPosRankSum=-2.001;VQSLOD=1.5426;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:24.47:0,24,400	./.	1/1:42,0:20:0.47:1,0,0	./.	0/0:9,0:9:11.47:0,11,79	1/1:9,5:14:18.01:247,18,0	1/1:14,12:26:33.11:453,33,0	0/0:3,0:2:0.47:0,0,1	0/0:28,0:28:51.17:0,51,979	0/0:17,0:16:26.77:0,27,369	0/0:8,0:7:8.99:0,9,128	0/0:25,0:25:39.13:0,39,750	0/0:20,0:20:24.08:0,24,473	0/0:21,0:20:42.08:0,42,773	0/0:21,0:21:39.09:0,39,672	0/0:10,0:10:21.28:0,21,468	0/0:18,0:18:42.14:0,42,828	0/0:15,0:15:20.90:0,21,358	./.	./.	0/1:7,0:7:0:0,0,0	0/0:4,0:4:6.02:0,6,106	0/0:7,0:7:12.02:0,12,200	0/0:25,0:25:33.02:0,33,538	1/1:5,3:8:9.03:124,9,0	0/1:14,1:14:19.78:20,0,254	./.	0/0:5,0:5:12.04:0,12,237
chr10	105129468	.	C	CCAT	882.41	PASS	AB=0.917;AC=5;AF=0.089;AN=56;BaseQRankSum=5.551;DP=351;FS=0.000;HRun=0;HaplotypeScore=59.6734;InbreedingCoeff=0.5425;MQ=57.16;MQ0=15;MQRankSum=-1.082;QD=19.18;ReadPosRankSum=-1.491;VQSLOD=2.8796;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:45.59:0,46,580	0/0:3,0:2:6.02:0,6,102	0/0:19,0:8:20.79:0,21,186	0/0:23,0:13:20.69:0,21,218	0/0:6,0:6:9.03:0,9,153	1/1:4,10:14:18.38:313,18,0	1/1:1,19:20:21.07:446,21,0	0/0:3,0:1:2.94:0,3,18	0/0:14,0:14:42.06:0,42,566	0/0:21,0:21:57.86:0,58,703	0/0:5,0:5:11.24:0,11,137	0/0:26,0:25:69.16:0,69,1003	0/0:13,0:13:36.09:0,36,558	0/0:16,0:16:45.07:0,45,595	0/0:14,0:13:36.04:0,36,465	0/0:8,0:8:17.88:0,18,229	0/0:23,0:22:66.09:0,66,951	0/0:19,0:19:54.04:0,54,755	0/0:3,0:3:0.63:0,1,15	0/0:5,0:4:2.16:0,2,22	0/0:9,0:6:5.98:0,6,47	0/0:7,0:7:21.05:0,21,323	0/0:5,0:4:9.01:0,9,126	0/0:21,0:21:60.04:0,60,853	0/1:10,1:11:4.67:248,0,5	0/0:13,0:13:32.91:0,33,478	0/0:3,0:3:4.12:0,4,18	0/0:7,0:7:14.05:0,14,159
chr10	105129616	.	C	CT	3686.41	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-12.318;DP=640;FS=2.554;HRun=5;HaplotypeScore=61.7665;InbreedingCoeff=0.8989;MQ=70.47;MQ0=2;MQRankSum=-0.886;QD=29.49;ReadPosRankSum=-1.733;VQSLOD=3.3857;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,111,1191	0/0:11,0:11:30.07:0,30,322	0/0:14,0:10:19.83:0,20,212	0/1:18,0:11:8.45:8,0,179	0/0:26,0:26:78.17:0,78,822	0/0:22,0:22:60.15:0,60,645	0/0:26,0:26:64.74:0,65,725	1/1:0,18:17:51.14:653,51,0	0/0:29,0:29:84.21:0,84,903	0/0:37,0:37:99:0,108,1151	0/0:27,0:27:72.18:0,72,773	0/0:25,0:25:69.17:0,69,741	0/0:19,0:19:51.13:0,51,548	0/0:19,0:19:51.13:0,51,548	0/0:22,0:21:57.12:0,57,602	0/0:16,0:16:42.09:0,42,443	0/0:27,0:27:78.20:0,78,838	0/0:24,0:25:42.67:0,43,712	1/1:1,18:19:54.17:697,54,0	1/1:2,23:25:69.22:908,69,0	1/1:2,23:25:60.20:790,60,0	0/0:15,0:15:42.09:0,42,443	0/0:20,0:20:57.14:0,57,612	0/0:21,0:21:63.16:0,63,677	0/0:20,0:20:57.14:0,57,613	0/0:38,0:38:99:0,108,1161	1/1:2,18:20:48.16:632,48,0	0/0:14,0:14:42.11:0,42,451
chr10	105130604	.	T	TG	1880.32	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-1.702;DP=638;FS=14.497;HRun=2;HaplotypeScore=62.5571;InbreedingCoeff=0.9993;MQ=78.75;MQ0=0;MQRankSum=-1.341;QD=34.82;ReadPosRankSum=0.123;VQSLOD=2.2547;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1334	0/0:20,0:20:60.18:0,60,732	0/0:22,0:22:46.99:0,47,547	0/0:12,0:12:24.64:0,25,264	0/0:29,0:29:81.16:0,81,945	1/1:0,22:22:63.21:905,63,0	1/1:2,14:16:36.12:518,36,0	0/0:24,0:24:66.20:0,66,808	0/0:21,0:21:63.17:0,63,755	0/0:29,0:29:84.22:0,84,988	0/0:15,0:15:45.14:0,45,556	0/0:29,0:29:81.19:0,81,950	0/0:29,0:29:81.21:0,81,962	0/0:19,0:19:57.18:0,57,705	0/0:19,0:19:54.15:0,54,645	0/0:15,0:15:42.09:0,42,482	0/0:30,0:30:90.27:0,90,1101	0/0:25,0:25:72.21:0,72,877	0/0:18,0:18:45.12:0,45,524	0/0:26,0:26:78.23:0,78,953	0/0:17,0:17:48.13:0,48,572	0/0:29,0:29:78.16:0,78,884	0/0:25,0:25:64.24:0,64,854	0/0:28,0:28:84.22:0,84,1001	1/1:0,16:16:42.14:600,42,0	0/0:22,0:22:66.18:0,66,785	0/0:27,0:27:81.21:0,81,963	0/0:15,0:15:45.12:0,45,527
chr10	105131180	.	T	TAC	178.42	PASS	AB=0.900;AC=8;AF=0.154;AN=52;BaseQRankSum=1.587;DP=675;FS=31.280;HRun=0;HaplotypeScore=96.4258;InbreedingCoeff=-0.1652;MQ=58.94;MQ0=28;MQRankSum=-3.798;QD=1.06;ReadPosRankSum=-1.857;VQSLOD=0.1296;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:33.02:0,33,322	0/1:7,1:8:14.98:15,0,34	0/0:45,0:14:3.01:0,3,33	0/1:47,0:20:21.71:22,0,49	0/0:20,0:21:39.07:0,39,418	0/0:23,0:21:4.04:0,4,16	./.	0/1:25,0:24:5.32:37,0,5	0/0:21,0:26:44.61:0,45,441	0/0:27,0:26:35.93:0,36,384	0/0:22,0:22:26.90:0,27,270	0/0:16,0:17:29.88:0,30,296	0/1:10,7:18:24.62:82,0,25	0/1:11,10:22:52.24:120,0,52	0/0:20,0:21:47.45:0,47,450	0/0:13,0:13:17.65:0,18,153	0/0:32,0:34:52.96:0,53,575	0/0:25,0:24:1.75:0,2,395	0/1:9,0:8:7.75:8,0,30	0/0:11,0:10:2.84:0,3,14	0/0:34,0:28:5.91:0,6,47	0/0:30,0:30:47.65:0,48,465	0/1:22,1:23:9.73:10,0,313	0/0:36,0:36:59.75:0,60,603	./.	0/0:30,0:29:7.39:0,7,344	0/1:15,0:15:9.83:10,0,38	0/0:9,0:8:6.02:0,6,67
chr10	105131201	.	ACACACACACACATAC	A	484.89	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=2.767;DP=753;FS=1.593;HRun=0;HaplotypeScore=209.9127;InbreedingCoeff=0.2343;MQ=46.65;MQ0=78;MQRankSum=-5.329;QD=2.92;ReadPosRankSum=-2.620;VQSLOD=2.2833;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:36:56.47:0,56,2323	0/1:6,0:6:12.52:20,0,13	0/0:27,0:5:6.02:0,6,116	0/1:33,0:8:13.35:13,0,107	0/0:23,0:23:53.39:0,53,2249	1/1:9,17:22:6.02:254,6,0	1/1:29,0:21:1.70:5,2,0	0/1:31,0:19:45.50:134,0,46	0/0:33,0:32:67.15:0,67,2550	0/0:38,0:31:72.24:0,72,2428	0/0:19,0:17:36.05:0,36,1250	0/0:24,0:22:56.72:0,57,1777	0/0:22,0:19:10.95:0,11,874	0/0:29,0:26:9.02:0,9,1523	0/0:29,0:26:63.66:0,64,2565	0/0:14,0:14:30.57:0,31,1461	0/0:45,0:43:66.19:0,66,3002	0/0:28,0:27:53.53:0,54,2574	0/1:12,0:10:61.54:127,0,62	1/1:12,0:9:2.94:18,3,0	0/0:50,0:36:5.89:0,6,152	0/0:32,0:32:61.80:0,62,2495	0/0:23,0:22:42.08:0,42,1402	0/0:42,0:40:82.18:0,82,3594	./.	0/0:40,0:31:70.88:0,71,2318	0/1:17,0:16:51.43:51,0,605	0/0:7,0:4:9.03:0,9,496
chr10	105131210	.	CACAT	C	984.14	PASS	AB=0.987;AC=15;AF=0.278;AN=54;BaseQRankSum=5.225;DP=759;FS=19.529;HRun=0;HaplotypeScore=106.9529;InbreedingCoeff=0.4212;MQ=46.23;MQ0=81;MQRankSum=-3.508;QD=3.92;ReadPosRankSum=-3.350;VQSLOD=-0.6158;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:36:26.35:26,0,723	0/1:8,0:8:18.13:18,0,73	0/0:24,0:4:9.03:0,9,167	0/1:33,0:6:5.59:6,0,193	0/0:24,0:24:47.45:0,47,1000	1/1:24,0:20:6:52,6,0	0/0:27,0:19:2.74:0,3,25	0/1:27,2:16:86.11:153,0,86	0/0:32,0:31:55.04:0,55,1020	0/0:41,0:34:34.24:0,34,1089	0/0:17,0:15:24.03:0,24,571	0/0:26,0:24:12.93:0,13,732	0/1:23,0:20:3.19:3,0,251	0/0:29,0:26:27.74:0,28,617	0/0:30,0:27:65.67:0,66,1150	0/0:13,0:13:32.96:0,33,496	0/0:48,0:46:26.04:0,26,1424	0/0:31,0:30:53.81:0,54,1280	1/1:15,2:15:23.17:316,23,0	1/1:10,1:9:3.01:58,3,0	1/1:50,0:35:15.03:152,15,0	0/0:31,0:31:30.93:0,31,1112	0/0:24,0:23:45.01:0,45,922	0/0:40,0:38:84.49:0,84,1666	./.	0/0:41,0:32:24.71:0,25,1026	1/1:12,3:14:1.90:361,2,0	0/0:7,0:4:9.01:0,9,187
chr10	105131213	.	ATAC	A	905.66	PASS	AB=0.941;AC=14;AF=0.259;AN=54;BaseQRankSum=6.479;DP=744;FS=7.756;HRun=0;HaplotypeScore=97.0889;InbreedingCoeff=0.5003;MQ=46.21;MQ0=81;MQRankSum=-1.197;QD=4.38;ReadPosRankSum=-3.166;VQSLOD=0.6540;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,1:36:30.46:0,30,924	0/1:8,0:8:6.50:123,0,6	0/0:24,0:2:6.02:0,6,116	0/1:30,1:6:12.54:13,0,107	0/0:23,0:23:55.99:0,56,1029	1/1:21,0:17:6.01:77,6,0	1/1:8,20:20:1.19:4,1,0	0/1:24,4:15:49.27:192,0,49	0/0:32,0:31:69.15:0,69,1143	0/0:40,0:33:68.87:0,69,1567	0/0:17,0:15:36:0,36,572	0/0:27,0:25:62.26:0,62,922	0/0:25,0:22:25.31:0,25,613	0/0:28,0:25:8.12:0,8,515	0/0:29,0:26:63.18:0,63,1113	0/0:13,0:13:36.06:0,36,635	0/0:45,0:43:84.07:0,84,1921	0/0:31,0:30:72.23:0,72,1247	0/1:17,1:16:40.49:160,0,40	1/1:8,4:9:5.95:65,6,0	1/1:35,11:31:11.76:136,12,0	0/0:31,0:31:56.78:0,57,1027	0/0:22,0:21:45.09:0,45,846	0/0:40,1:39:67.39:0,67,1692	./.	0/0:39,0:30:64.97:0,65,1192	1/1:10,4:13:27.95:299,28,0	0/0:7,0:4:9.03:0,9,211
chr10	105131216	.	CCA	C	122.05	PASS	AB=0.959;AC=10;AF=0.200;AN=50;BaseQRankSum=3.202;DP=750;FS=7.089;HRun=0;HaplotypeScore=90.9200;InbreedingCoeff=-0.0650;MQ=46.03;MQ0=81;MQRankSum=-0.520;QD=0.49;ReadPosRankSum=1.419;VQSLOD=1.1393;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,5:36:25.99:26,0,432	0/0:7,0:7:0.47:0,0,1	./.	./.	0/0:23,0:23:32.85:0,33,374	1/1:21,0:17:5.39:23,5,0	0/0:28,0:22:0.45:0,0,1	0/0:28,0:15:3.48:0,3,38	0/0:31,0:31:26.45:0,26,537	0/0:42,1:36:8.87:0,9,490	0/0:17,0:15:15.04:0,15,203	0/1:26,0:25:39.72:40,0,358	0/1:24,0:21:0.18:0,0,391	0/1:27,1:25:41.36:41,0,237	0/0:25,4:26:2.15:0,2,394	0/1:13,0:13:9.01:9,0,250	0/0:41,6:46:21.20:0,21,911	0/1:28,1:29:35.65:36,0,424	0/0:18,0:16:5.94:0,6,27	0/0:11,0:9:2.37:0,2,8	0/0:45,0:32:3.47:0,3,35	0/1:29,1:31:9.86:10,0,277	0/0:21,0:20:15.03:0,15,203	0/0:37,1:36:3.07:0,3,641	./.	0/1:35,1:27:60.59:61,0,204	0/0:15,0:15:18.68:0,19,89	0/0:7,0:4:9.01:0,9,116
chr10	105132487	.	GGT	G	1627.08	PASS	AB=0.906;AC=10;AF=0.179;AN=56;BaseQRankSum=7.555;DP=925;FS=2.872;HRun=0;HaplotypeScore=143.6469;InbreedingCoeff=0.7563;MQ=55.02;MQ0=37;MQRankSum=1.205;QD=10.17;ReadPosRankSum=1.095;VQSLOD=3.3994;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:81.27:0,81,1281	1/1:2,7:9:17.84:180,18,0	0/0:71,0:18:32.41:0,32,328	0/0:51,0:13:17.81:0,18,195	0/0:21,0:20:43.28:0,43,797	1/1:10,16:25:45.13:541,45,0	1/1:9,23:33:56.95:676,57,0	0/0:35,1:34:26.26:0,26,891	0/0:26,1:27:4.39:0,4,1050	0/0:39,0:38:69.20:0,69,1050	0/0:9,0:9:21.07:0,21,327	0/0:30,0:30:78.26:0,78,1236	0/0:33,0:34:88.54:0,89,1399	0/0:32,2:34:22.84:0,23,1366	0/0:29,2:31:47.51:0,48,1263	0/0:34,0:33:87.30:0,87,1406	0/0:36,0:37:99:0,100,1567	0/0:23,1:23:20.94:0,21,807	0/0:36,1:28:40.61:0,41,565	0/1:22,3:25:22.27:22,0,668	0/0:107,0:105:99:0,168,3122	0/0:28,1:28:29.29:0,29,955	0/0:15,0:15:42.14:0,42,670	0/1:42,4:45:2.47:2,0,1468	1/1:5,15:19:30.09:369,30,0	0/0:24,1:21:14.21:0,14,689	0/0:20,0:20:42.14:0,42,678	0/0:12,0:12:30.10:0,30,482
chr10	105132529	.	C	CGT	7457.38	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=3.444;DP=1003;FS=20.652;HRun=0;HaplotypeScore=168.6970;InbreedingCoeff=0.9992;MQ=67.06;MQ0=7;MQRankSum=-1.878;QD=30.56;ReadPosRankSum=-1.964;VQSLOD=4.2886;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,117,1384	1/1:5,9:14:27.09:430,27,0	0/0:49,0:35:24.54:0,25,529	0/0:51,0:38:50.91:0,51,557	0/0:23,0:24:56.98:0,57,655	0/0:24,0:24:57.12:0,57,667	0/0:39,0:39:75.22:0,75,917	1/1:8,21:31:67.98:1015,68,0	0/0:38,0:39:99:0,105,1261	0/0:36,0:37:75.06:0,75,895	0/0:22,0:23:66.04:0,66,795	0/0:35,0:35:83.93:0,84,1014	0/0:42,0:43:87.10:0,87,1055	0/0:40,0:40:99:0,105,1301	0/0:39,0:39:99:0,99,1207	0/0:44,0:44:99:0,115,1386	0/0:29,0:32:83.63:0,84,943	0/0:23,0:24:56.97:0,57,656	1/1:12,15:26:57.19:914,57,0	1/1:6,17:24:34.01:711,34,0	1/1:26,87:116:97.25:3393,97,0	0/0:25,0:26:66.03:0,66,783	0/0:24,0:24:60.16:0,60,728	0/0:55,0:56:99:0,135,1628	0/0:17,0:18:44.97:0,45,535	0/0:28,0:28:75.23:0,75,919	1/1:6,25:30:29.03:993,29,0	0/0:16,0:16:36.11:0,36,446
chr10	105132622	.	G	GGT	10259.04	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-8.973;DP=1088;FS=0.915;HRun=0;HaplotypeScore=158.8841;InbreedingCoeff=0.9955;MQ=57.35;MQ0=25;MQRankSum=-1.055;QD=30.26;ReadPosRankSum=-2.737;VQSLOD=5.5746;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:62:99:0,141,1757	1/1:2,6:7:15.05:251,15,0	0/0:56,0:23:56.62:0,57,621	0/0:58,0:26:43.47:0,43,617	0/0:21,0:21:45.14:0,45,573	1/1:7,18:24:19.01:808,19,0	1/1:15,23:39:49.31:950,49,0	1/1:29,17:44:34.61:1046,35,0	0/0:33,0:33:72.23:0,72,914	0/0:39,0:39:99:0,99,1255	0/0:19,0:19:42.13:0,42,534	0/0:44,0:44:99:0,102,1241	0/0:45,0:45:99:0,120,1502	0/0:36,0:36:84.26:0,84,1056	0/0:48,0:47:99:0,123,1519	0/0:38,0:37:87.28:0,87,1107	0/0:41,0:40:99:0,105,1291	0/0:36,0:38:67.33:0,67,1081	1/1:17,12:24:29.53:497,30,0	1/1:4,12:17:39.13:648,39,0	1/1:47,76:120:99:4265,265,0	0/0:26,0:26:19.97:0,20,720	0/0:22,0:22:54.16:0,54,670	0/0:68,0:69:99:0,165,2096	1/1:3,17:20:36.12:587,36,0	0/0:30,0:28:66.20:0,66,823	1/1:9,20:27:42.80:1207,43,0	0/0:20,0:20:42.13:0,42,525
chr10	105132650	.	GGT	G	2044.01	PASS	AB=0.943;AC=9;AF=0.161;AN=56;BaseQRankSum=9.174;DP=1056;FS=1.925;HRun=0;HaplotypeScore=176.4397;InbreedingCoeff=0.5476;MQ=59.73;MQ0=14;MQRankSum=-3.918;QD=10.70;ReadPosRankSum=-3.409;VQSLOD=3.0529;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,132,2122	0/0:9,0:8:15.05:0,15,232	0/0:56,0:27:7.70:0,8,299	0/1:56,0:28:6.26:6,0,323	0/0:17,0:17:39.13:0,39,636	1/1:8,20:27:62.96:744,63,0	1/1:10,28:38:72.10:849,72,0	0/0:39,1:39:49.99:0,50,1231	0/0:31,0:31:72.25:0,72,1172	0/0:39,0:39:87.29:0,87,1394	0/0:16,0:16:36.12:0,36,573	0/0:43,0:43:99:0,99,1559	0/0:47,0:47:74.40:0,74,1672	0/1:26,2:28:7.66:8,0,909	0/0:54,0:53:99:0,135,2151	0/0:36,2:37:13.42:0,13,1238	0/0:44,0:43:76.90:0,77,1712	0/0:30,1:33:0.24:0,0,758	0/0:28,0:25:45.62:0,46,733	0/1:15,2:17:27.93:28,0,575	0/0:124,1:123:99:0,234,4170	0/0:27,0:27:63.21:0,63,1003	0/0:20,0:20:48.16:0,48,782	0/0:60,1:61:89.13:0,89,2444	1/1:10,13:23:51.02:562,51,0	0/0:33,2:35:42.57:0,43,1163	0/0:25,0:26:60.14:0,60,893	0/0:14,1:15:5.21:0,5,552
chr10	105133864	.	A	AC	112.29	PASS	AB=0.556;AC=1;AF=0.018;AN=56;BaseQRankSum=-0.953;DP=634;FS=2.687;HRun=8;HaplotypeScore=68.8272;InbreedingCoeff=0.2048;MQ=71.04;MQ0=1;MQRankSum=-0.484;QD=11.23;ReadPosRankSum=-0.385;VQSLOD=2.5906;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:89.99:0,90,809	0/1:2,8:10:6.40:187,0,6	0/0:20,0:15:26.95:0,27,231	0/0:22,0:16:13.90:0,14,128	0/0:28,0:28:71.97:0,72,649	0/0:20,0:20:44.98:0,45,403	0/0:20,0:20:51:0,51,463	0/0:25,0:25:51:0,51,462	0/0:26,0:26:74.99:0,75,669	0/0:22,0:22:57:0,57,514	0/0:18,0:18:50.96:0,51,453	0/0:23,0:23:63.02:0,63,571	0/0:13,0:13:39.02:0,39,356	0/0:19,0:19:54.03:0,54,494	0/0:15,0:15:39:0,39,351	0/0:24,0:24:72.02:0,72,654	0/0:43,0:43:99:0,108,1010	0/0:21,0:22:53.05:0,53,473	0/0:17,0:17:39:0,39,352	0/0:24,0:25:39.63:0,40,530	0/0:26,2:28:2.79:0,3,530	0/0:23,0:23:60.02:0,60,544	0/0:16,0:16:11.89:0,12,320	0/0:22,0:22:50.99:0,51,461	0/0:22,0:22:57:0,57,516	0/0:32,0:32:87.02:0,87,788	0/0:30,0:31:83.07:0,83,747	0/0:12,0:12:36.02:0,36,329
chr10	105134129	.	C	CA	5062.01	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=-1.374;DP=569;FS=5.526;HRun=8;HaplotypeScore=73.9966;InbreedingCoeff=0.8812;MQ=71.47;MQ0=0;MQRankSum=-1.184;QD=22.80;ReadPosRankSum=-2.799;VQSLOD=4.1894;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:81.04:0,81,741	1/1:0,0:8:17.04:87,17,0	0/1:19,0:18:2.46:2,0,221	0/1:17,0:17:6.08:6,0,176	0/0:29,0:29:72.02:0,72,659	1/1:4,19:23:60.15:679,60,0	1/1:4,19:23:56.53:631,57,0	1/1:6,14:20:46.90:515,47,0	0/0:18,0:18:45.02:0,45,412	0/0:32,0:32:87.04:0,87,794	0/0:18,0:18:39.01:0,39,357	0/0:11,0:11:30.02:0,30,275	0/0:7,0:7:21.01:0,21,192	0/0:17,0:17:37.16:0,37,401	0/0:16,0:16:39.01:0,39,357	0/0:15,0:15:39.02:0,39,357	0/0:24,0:24:57:0,57,516	0/0:22,0:22:50.99:0,51,467	1/1:2,17:19:54.13:607,54,0	1/1:4,17:22:57:632,57,0	1/1:2,6:8:16.29:177,16,0	0/0:27,0:27:69.02:0,69,626	0/0:23,0:23:51.01:0,51,467	0/0:18,0:18:48.03:0,48,439	1/1:2,26:28:72.20:822,72,0	0/0:30,0:30:78.03:0,78,714	1/1:6,28:34:81.16:905,81,0	0/0:6,0:6:18.01:0,18,165
chr10	105135113	.	C	CAG	110.04	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=2.605;DP=738;FS=1.363;HRun=0;HaplotypeScore=121.6587;InbreedingCoeff=0.6357;MQ=69.29;MQ0=9;MQRankSum=0.981;QD=2.00;ReadPosRankSum=-0.251;VQSLOD=2.4324;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:53.86:0,54,601	1/1:4,4:8:12.04:195,12,0	0/0:41,0:25:10.64:0,11,300	0/1:47,0:25:7.65:8,0,190	0/0:27,0:27:63.18:0,63,761	0/0:26,0:26:42.12:0,42,491	0/0:31,0:29:51.08:0,51,581	0/0:30,0:28:69.13:0,69,786	0/0:20,1:20:45.14:0,45,552	0/0:26,0:26:72.17:0,72,832	0/0:25,0:25:42.10:0,42,489	0/0:23,0:24:47.98:0,48,567	0/0:29,0:29:75.05:0,75,882	0/0:16,0:16:30.09:0,30,369	0/0:19,0:19:48.09:0,48,560	0/0:12,0:12:33.05:0,33,355	0/0:24,0:24:54.15:0,54,651	0/0:35,0:34:49.80:0,50,894	0/0:28,0:26:60.16:0,60,712	0/0:30,0:29:68.97:0,69,781	0/0:29,0:29:69.05:0,69,801	0/0:29,0:29:51.11:0,51,813	0/0:19,0:19:57.16:0,57,688	0/0:29,0:30:65.97:0,66,758	0/0:26,0:26:51.12:0,51,570	0/0:40,0:40:99:0,102,1225	0/0:24,0:24:51.16:0,51,627	0/0:12,0:12:30.07:0,30,344
chr10	105135129	.	CAGAGAT	C	1857.90	PASS	AB=0.996;AC=9;AF=0.161;AN=56;BaseQRankSum=10.180;DP=824;FS=18.088;HRun=0;HaplotypeScore=168.8317;InbreedingCoeff=0.6265;MQ=58.11;MQ0=34;MQRankSum=-3.075;QD=7.01;ReadPosRankSum=-1.443;VQSLOD=1.5799;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:45.14:0,45,1956	0/0:10,0:10:6.36:0,6,139	0/1:67,0:16:20.76:21,0,219	0/1:84,0:24:12.82:13,0,151	0/0:31,0:31:90.08:0,90,1833	1/1:15,9:24:42.01:700,42,0	1/1:23,7:28:41.41:588,41,0	0/0:35,0:31:69.08:0,69,973	0/0:23,0:22:53.59:0,54,1164	0/0:30,0:30:90.27:0,90,2053	0/0:21,0:21:54.13:0,54,1280	0/0:25,0:25:59.72:0,60,1084	0/0:29,0:29:75.22:0,75,1819	0/0:11,0:11:33.10:0,33,845	0/0:20,0:20:60.08:0,60,1420	0/0:18,0:18:48.15:0,48,1300	0/0:23,0:23:63.12:0,63,1699	0/1:35,0:35:2.29:2,0,1838	0/0:28,0:23:60.13:0,60,1458	0/0:31,0:30:80.50:0,81,1821	0/0:30,0:30:72.18:0,72,1781	0/0:30,0:30:88.79:0,89,2035	0/0:21,0:21:63.13:0,63,1422	0/0:35,0:35:90.15:0,90,2265	1/1:11,12:23:44.96:687,45,0	0/0:40,0:40:99:0,117,2731	0/0:25,0:25:66.11:0,66,1534	0/0:12,0:12:36.07:0,36,680
chr10	105135135	.	T	TAG	78.52	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.125;DP=824;FS=4.505;HRun=0;HaplotypeScore=125.4806;InbreedingCoeff=0.7974;MQ=57.06;MQ0=36;MQRankSum=-3.475;QD=7.14;ReadPosRankSum=-2.592;VQSLOD=2.9966;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:71.26:0,71,858	1/1:7,4:11:12.04:164,12,0	0/0:70,0:16:6.47:0,6,61	0/0:96,0:23:6.25:0,6,87	0/0:31,0:31:66.03:0,66,770	0/0:23,0:23:35.19:0,35,229	0/0:27,0:25:20.71:0,21,149	0/0:33,0:28:26.72:0,27,378	0/0:21,0:20:54.17:0,54,652	0/0:29,0:29:66.18:0,66,787	0/0:21,0:21:51.14:0,51,605	0/0:23,0:23:39.11:0,39,461	0/0:29,0:29:66.19:0,66,783	0/0:12,0:12:33.07:0,33,376	0/0:21,0:21:48.15:0,48,581	0/0:17,0:17:48.13:0,48,562	0/0:23,0:23:63.06:0,63,712	0/0:33,0:33:25.54:0,26,672	0/0:23,0:18:51.15:0,51,611	0/0:30,0:30:77.86:0,78,864	0/0:30,0:30:57.16:0,57,679	0/0:30,0:30:57.21:0,57,750	0/0:22,0:22:45.14:0,45,542	0/0:35,0:35:78:0,78,904	0/0:21,0:21:23.38:0,23,155	0/0:40,0:40:87.26:0,87,1050	0/0:25,0:25:51.16:0,51,695	0/0:13,0:14:38.95:0,39,444
chr10	105135159	.	CAG	C	562.42	PASS	AB=0.973;AC=7;AF=0.125;AN=56;BaseQRankSum=9.002;DP=807;FS=1.562;HRun=0;HaplotypeScore=124.7262;InbreedingCoeff=0.8227;MQ=56.14;MQ0=35;MQRankSum=-4.749;QD=3.39;ReadPosRankSum=-4.254;VQSLOD=1.3471;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:72.10:0,72,1348	0/0:12,0:11:9.03:0,9,109	0/0:67,0:13:26.80:0,27,307	0/1:107,1:27:8.62:9,0,268	0/0:22,0:22:60.19:0,60,992	1/1:5,12:17:28.10:321,28,0	1/1:6,15:19:10.98:123,11,0	0/0:28,0:24:69.20:0,69,1126	0/0:23,0:23:60.12:0,60,954	0/0:33,0:33:84.29:0,84,1408	0/0:19,0:19:54.18:0,54,910	0/0:21,0:21:54.18:0,54,918	0/0:24,0:24:60.19:0,60,962	0/0:15,0:15:39.12:0,39,627	0/0:20,0:20:54.18:0,54,909	0/0:21,0:21:57.19:0,57,963	0/0:28,0:28:68.99:0,69,1096	0/0:31,0:30:70.68:0,71,1175	0/0:19,0:19:45.15:0,45,753	0/0:27,0:27:69.24:0,69,1155	0/0:35,0:33:66.16:0,66,1039	0/0:23,0:22:60.15:0,60,938	0/0:22,0:22:48.16:0,48,811	0/0:42,0:42:99:0,99,1616	1/1:1,17:18:25.29:253,25,0	0/0:34,0:34:90.30:0,90,1500	0/0:27,0:27:66.22:0,66,1086	0/0:12,0:11:24.08:0,24,407
chr10	105135218	.	CAG	C	1339.83	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.961;DP=823;FS=0.594;HRun=0;HaplotypeScore=116.7244;InbreedingCoeff=0.9718;MQ=53.54;MQ0=27;MQRankSum=3.908;QD=20.30;ReadPosRankSum=1.439;VQSLOD=4.0725;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:87.24:0,87,1384	0/0:9,0:8:11.97:0,12,171	0/0:71,0:19:26.04:0,26,364	0/0:101,0:20:11.49:0,11,128	0/0:22,0:22:54.16:0,54,844	1/1:3,19:22:45.10:554,45,0	1/1:18,9:25:48.15:617,48,0	0/0:54,0:47:90.06:0,90,1225	0/0:30,0:30:78.20:0,78,1223	0/0:32,0:32:84.26:0,84,1360	0/0:18,0:18:51.13:0,51,794	0/0:24,0:24:53.53:0,54,839	0/0:20,1:21:17.56:0,18,706	0/0:23,0:23:65.42:0,65,1032	0/0:18,0:18:51.12:0,51,741	0/0:20,0:20:33.10:0,33,513	0/0:29,0:29:84.11:0,84,1242	0/0:26,0:26:72.22:0,72,1157	0/0:19,0:18:42.13:0,42,628	0/0:20,0:20:42.07:0,42,640	0/0:31,0:30:42.08:0,42,625	0/0:28,0:27:69.22:0,69,1129	0/0:18,0:18:39.10:0,39,586	0/0:36,0:36:81.21:0,81,1275	1/1:1,16:17:24.08:312,24,0	0/0:36,0:36:99:0,99,1564	0/0:20,0:20:48.14:0,48,780	0/0:10,0:10:24.04:0,24,350
chr10	105135248	.	CAGAG	C	1909.51	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.897;DP=798;FS=3.688;HRun=0;HaplotypeScore=137.6398;InbreedingCoeff=0.9905;MQ=56.17;MQ0=23;MQRankSum=-2.465;QD=19.69;ReadPosRankSum=-1.273;VQSLOD=3.3802;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,108,2597	0/0:7,0:6:15.05:0,15,395	0/0:66,0:21:18.09:0,18,470	0/0:105,0:24:31.40:0,31,478	0/0:23,0:23:63.22:0,63,1631	0/0:31,0:31:60.19:0,60,1457	0/0:30,0:30:54.02:0,54,1316	1/1:17,8:17:17.98:239,18,0	0/0:31,0:31:75.24:0,75,1848	0/0:31,0:31:87.27:0,87,1997	0/0:20,0:20:48.16:0,48,1237	0/0:22,0:22:51.18:0,51,1338	0/0:20,0:20:60.21:0,60,1511	0/0:22,0:22:66.20:0,66,1600	0/0:16,0:16:45.14:0,45,1133	0/0:15,0:15:33.11:0,33,871	0/0:31,0:31:84.25:0,84,2005	0/0:27,0:27:72.21:0,72,1694	1/1:7,6:10:24:369,24,0	1/1:5,13:18:26.89:448,27,0	1/1:6,16:22:21.07:387,21,0	0/0:27,0:27:69.24:0,69,1733	0/0:15,0:15:33.09:0,33,785	0/0:35,0:35:87.27:0,87,1998	0/0:19,0:19:33.11:0,33,779	0/0:47,0:47:99:0,138,3309	1/1:7,12:19:36.12:640,36,0	0/0:14,0:13:36.12:0,36,950
chr10	105135299	.	AGAGAGACAGG	A	3073.40	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=8.562;DP=756;FS=1.086;HRun=0;HaplotypeScore=216.6703;InbreedingCoeff=0.7730;MQ=63.85;MQ0=30;MQRankSum=-5.985;QD=21.49;ReadPosRankSum=-2.569;VQSLOD=2.7015;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:95.82:0,96,3372	1/1:4,0:3:9.03:222,9,0	0/0:64,0:21:28.76:0,29,473	0/0:116,0:28:4.07:0,4,472	0/0:19,0:18:45.13:0,45,1466	0/0:34,0:34:34.98:0,35,677	0/1:22,0:22:19.11:19,0,242	1/1:12,20:29:50.73:1495,51,0	0/0:24,0:24:66.17:0,66,2695	0/0:25,0:24:66.16:0,66,2378	0/0:14,0:14:39.11:0,39,1188	0/0:22,0:22:40.44:0,40,1810	0/0:21,0:21:60.20:0,60,2588	0/0:15,0:15:42.14:0,42,1693	0/0:15,0:15:42.14:0,42,1728	0/0:20,0:20:51.04:0,51,2001	0/0:34,0:34:49.27:0,49,3433	0/0:20,0:20:50.69:0,51,2050	1/1:19,4:16:36.86:760,37,0	1/1:14,7:20:17.05:217,17,0	1/1:11,1:11:5.88:63,6,0	0/0:25,0:25:69.20:0,69,2521	0/0:15,0:15:42.13:0,42,1402	0/0:28,0:28:72.17:0,72,2920	0/1:19,0:19:4.31:4,0,209	0/0:42,0:42:99:0,108,4318	1/1:6,4:9:21.02:476,21,0	0/0:16,0:16:42.13:0,42,1813
chr10	105135307	.	AGG	A	1304.51	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=10.002;DP=738;FS=0.485;HRun=3;HaplotypeScore=142.9899;InbreedingCoeff=0.7977;MQ=63.13;MQ0=24;MQRankSum=-5.868;QD=9.96;ReadPosRankSum=-2.232;VQSLOD=-0.3973;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,103,1814	1/1:2,3:4:9:105,9,0	0/0:60,0:22:24.69:0,25,339	0/0:110,1:27:22.92:0,23,463	0/0:18,0:17:48.14:0,48,853	0/0:33,0:33:39.29:0,39,491	0/1:23,0:23:16.39:16,0,168	1/1:26,2:23:62.34:735,62,0	0/0:24,0:24:72.19:0,72,1280	0/0:25,0:24:66.16:0,66,1137	0/0:14,0:14:39.11:0,39,659	0/0:20,0:20:50.57:0,51,880	0/0:25,0:25:75.22:0,75,1362	0/0:14,0:14:42.14:0,42,810	0/0:16,0:16:48.16:0,48,881	0/0:19,0:19:54.03:0,54,965	0/0:35,1:36:39.27:0,39,1611	0/0:23,0:23:50.75:0,51,1117	1/1:13,5:15:37.47:308,37,0	1/1:12,9:20:19.05:113,19,0	1/1:8,0:7:5.92:43,6,0	0/0:23,0:23:69.20:0,69,1200	0/0:17,0:17:51.16:0,51,928	0/0:30,0:30:75.21:0,75,1364	0/1:17,0:17:4.53:5,0,140	0/0:40,0:40:99:0,114,2055	1/1:8,3:10:21.21:163,21,0	0/0:15,0:15:42.13:0,42,779
chr10	105135322	.	GAA	G	453	PASS	AB=0.963;AC=9;AF=0.161;AN=56;BaseQRankSum=9.457;DP=724;FS=1.786;HRun=3;HaplotypeScore=138.1634;InbreedingCoeff=0.6256;MQ=57.47;MQ0=27;MQRankSum=-8.643;QD=4.92;ReadPosRankSum=-0.829;VQSLOD=-0.2706;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,1:38:63.42:0,63,1406	1/1:4,0:4:5.66:35,6,0	0/0:67,0:17:8.13:0,8,199	0/0:110,0:21:21.32:0,21,238	0/0:19,0:19:47.05:0,47,583	0/0:37,0:37:43.27:0,43,250	0/1:17,0:17:2.38:2,0,74	1/1:36,0:31:59.26:358,59,0	0/0:28,1:29:13.67:0,14,1144	0/0:20,0:20:48.29:0,48,823	0/0:12,0:12:33.05:0,33,495	0/0:15,0:16:7.93:0,8,600	0/0:24,0:24:72.18:0,72,1181	0/0:11,0:11:30.06:0,30,510	0/0:15,0:14:45.13:0,45,766	0/0:18,0:18:40.46:0,40,790	0/0:31,1:32:64.28:0,64,1290	0/0:24,0:24:68.38:0,68,1108	0/1:18,0:13:25.72:112,0,26	0/0:16,0:16:6.30:0,6,31	0/1:7,1:7:0.82:3,0,1	0/0:22,0:22:61.95:0,62,989	0/0:14,0:14:42.13:0,42,747	0/0:31,1:32:78.17:0,78,1290	0/0:19,0:19:16.43:0,16,116	0/0:37,0:37:94.03:0,94,1710	1/1:8,0:7:14.11:84,14,0	0/0:19,0:18:53.45:0,53,791
chr10	105135324	.	AAGAGAG	A	893.56	PASS	AB=0.719;AC=11;AF=0.196;AN=56;BaseQRankSum=8.502;DP=727;FS=24.847;HRun=0;HaplotypeScore=175.6337;InbreedingCoeff=0.6362;MQ=56.87;MQ0=26;MQRankSum=-8.221;QD=8.51;ReadPosRankSum=-3.022;VQSLOD=0.7023;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:64.30:0,64,2058	0/1:4,0:4:13.08:17,0,13	0/0:65,0:17:17.85:0,18,176	0/0:107,0:22:12.09:0,12,328	0/0:20,0:20:38.70:0,39,879	1/1:8,27:35:12.29:670,12,0	1/1:4,12:16:20.81:262,21,0	0/0:24,0:31:31.75:0,32,317	0/0:28,0:28:81.23:0,81,2165	0/0:19,0:20:54.17:0,54,1314	0/0:13,0:13:24.07:0,24,641	0/0:19,0:19:46.31:0,46,1063	0/0:24,0:24:66.23:0,66,1924	0/0:10,0:10:27.09:0,27,869	0/0:15,0:14:42.14:0,42,1253	0/0:18,0:19:54.17:0,54,1419	0/0:35,0:35:81.27:0,81,2130	0/0:26,0:25:63.20:0,63,1777	0/1:10,0:13:1.98:2,0,217	0/0:7,0:15:12.43:0,12,68	1/1:4,0:5:1.79:5,2,0	0/0:21,0:21:54.18:0,54,1596	0/0:17,0:17:48.12:0,48,1329	0/0:34,0:34:72.23:0,72,2066	1/1:4,14:18:11.66:80,12,0	0/0:36,0:36:86.32:0,86,2622	0/1:3,0:7:5.84:6,0,58	0/0:24,0:23:60.06:0,60,1465
chr10	105135340	.	GGAGA	G	807.65	PASS	AB=0.861;AC=8;AF=0.143;AN=56;BaseQRankSum=6.875;DP=764;FS=7.885;HRun=0;HaplotypeScore=154.2976;InbreedingCoeff=0.2503;MQ=48.12;MQ0=40;MQRankSum=-7.506;QD=7.28;ReadPosRankSum=-3.005;VQSLOD=1.2479;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:47.49:0,47,1403	1/1:3,1:5:5.72:50,6,0	0/0:65,0:9:7.72:0,8,116	0/0:112,0:16:12.04:0,12,273	0/0:18,0:18:42.12:0,42,951	0/0:32,0:32:46.18:0,46,509	0/0:16,0:16:22.75:0,23,338	0/1:32,6:32:99:222,0,445	0/0:27,0:27:66.21:0,66,1535	0/0:20,0:20:45.15:0,45,944	0/0:14,0:14:33.11:0,33,808	0/0:19,0:19:50.99:0,51,1170	0/0:30,0:31:81.07:0,81,1955	0/0:11,0:11:30.10:0,30,727	0/0:18,0:17:48.16:0,48,1170	0/0:19,0:19:51.16:0,51,1207	0/0:35,0:35:64.68:0,65,1793	0/0:26,0:24:57.20:0,57,1415	0/1:17,6:21:89.85:367,0,90	0/1:17,0:18:3.43:3,0,77	1/1:7,1:7:0.47:1,0,0	0/0:26,0:25:63.20:0,63,1513	0/0:20,0:20:54.18:0,54,1237	0/0:34,0:35:72.24:0,72,1734	0/0:18,0:18:17.75:0,18,320	0/0:36,0:37:90.14:0,90,2128	0/1:10,5:16:88.79:281,0,89	0/0:21,0:23:60.14:0,60,1434
chr10	105135361	.	A	AGAGAG	2129.32	PASS	AB=0.947;AC=11;AF=0.196;AN=56;BaseQRankSum=9.145;DP=737;FS=18.600;HRun=0;HaplotypeScore=155.4152;InbreedingCoeff=0.6118;MQ=46.81;MQ0=47;MQRankSum=-9.751;QD=16.90;ReadPosRankSum=-2.252;VQSLOD=1.8573;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:70.84:0,71,1258	1/1:4,2:7:8.75:238,9,0	0/0:49,0:5:9.03:0,9,167	0/0:101,0:8:14.73:0,15,191	0/0:25,0:24:59.85:0,60,1179	0/0:29,0:29:39.13:0,39,789	0/0:21,0:21:41.80:0,42,660	0/1:41,0:31:29.34:423,0,29	0/0:28,0:28:59.37:0,59,1383	0/0:26,0:26:69.23:0,69,1277	0/0:19,0:19:57.19:0,57,1104	0/0:15,0:15:42.14:0,42,870	0/0:31,0:30:78.24:0,78,1488	0/0:11,0:11:27.09:0,27,557	0/0:15,0:14:42.14:0,42,837	0/0:21,0:21:53.77:0,54,1029	0/0:34,0:34:74.90:0,75,1692	0/0:22,0:21:57.19:0,57,1141	0/1:17,3:18:32.33:616,0,32	1/1:12,6:20:6.02:140,6,0	1/1:5,2:6:5.38:45,5,0	0/0:25,0:24:66.22:0,66,1300	0/0:19,0:19:51.17:0,51,1023	0/0:32,0:32:71.86:0,72,1405	0/1:14,0:14:0.63:1,0,327	0/0:36,0:36:75.53:0,76,1735	1/1:12,4:16:31.04:819,31,0	0/0:22,0:22:54.09:0,54,1023
chr10	105135362	.	GAGAGAC	G	749.72	PASS	AB=0.850;AC=10;AF=0.179;AN=56;BaseQRankSum=5.490;DP=741;FS=18.763;HRun=0;HaplotypeScore=161.5899;InbreedingCoeff=0.4574;MQ=46.96;MQ0=47;MQRankSum=-5.884;QD=3.54;ReadPosRankSum=-3.111;VQSLOD=0.8486;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:48.13:0,48,1236	1/1:6,1:7:6.02:96,6,0	0/0:49,0:5:3.01:0,3,59	0/1:99,0:8:0.89:1,0,26	0/0:25,0:24:54.19:0,54,1736	0/0:29,0:29:30:0,30,795	0/0:21,0:21:38.26:0,38,946	1/1:41,1:32:9:142,9,0	0/0:28,0:28:51.24:0,51,1523	0/0:26,0:26:63.14:0,63,1461	0/0:19,0:19:51.09:0,51,1410	0/0:17,0:17:41.92:0,42,1195	0/0:31,0:30:63.18:0,63,1789	0/0:12,0:12:24.05:0,24,713	0/0:15,0:14:30.10:0,30,894	0/0:21,0:21:45.14:0,45,1294	0/0:34,0:34:23.90:0,24,1819	0/0:22,0:21:48.16:0,48,1351	0/1:17,3:17:20.23:214,0,20	0/1:16,4:20:8.59:42,0,9	1/1:7,0:7:6.01:86,6,0	0/0:26,0:25:60.14:0,60,1523	0/0:19,0:19:36.12:0,36,995	0/0:32,0:32:32.19:0,32,1596	0/0:14,0:14:17.79:0,18,519	0/0:35,0:36:74.59:0,75,1973	0/1:9,7:16:31.05:309,0,31	0/0:23,0:23:42.12:0,42,1156
chr10	105135808	.	CT	C	4645.85	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.661;DP=656;FS=11.669;HRun=9;HaplotypeScore=71.6670;InbreedingCoeff=0.9994;MQ=83.17;MQ0=0;MQRankSum=-0.669;QD=21.51;ReadPosRankSum=-0.388;VQSLOD=4.6437;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,124,1406	1/1:2,10:12:24.01:220,24,0	0/0:33,0:30:55.35:0,55,575	0/0:30,0:24:29.37:0,29,316	0/0:31,0:31:87.23:0,87,985	1/1:2,21:23:63.03:576,63,0	1/1:4,24:28:51.02:467,51,0	1/1:2,31:33:89.99:806,90,0	0/0:25,0:25:35.68:0,36,641	0/0:26,0:26:72.18:0,72,802	0/0:22,0:22:63.14:0,63,696	0/0:21,0:21:51.08:0,51,547	0/0:15,0:15:39.09:0,39,430	0/0:19,0:19:44.05:0,44,610	0/0:16,0:16:42.12:0,42,485	0/0:22,1:23:41.70:0,42,707	0/0:23,0:23:60.18:0,60,692	0/0:18,0:18:51.15:0,51,589	1/1:4,16:20:47.92:421,48,0	1/1:3,22:25:62.94:565,63,0	1/1:2,24:26:63.03:577,63,0	0/0:22,0:22:63.16:0,63,701	0/0:22,0:22:60.17:0,60,686	0/0:14,0:14:39.10:0,39,441	1/1:3,22:25:54.02:493,54,0	0/0:27,0:27:75.22:0,75,858	1/1:3,21:24:57.03:522,57,0	0/0:9,0:9:27.07:0,27,302
chr10	105137293	.	AAAAAG	A	4336.86	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.981;DP=594;FS=0.382;HRun=0;HaplotypeScore=144.4449;InbreedingCoeff=0.9895;MQ=68.95;MQ0=0;MQRankSum=-8.274;QD=27.28;ReadPosRankSum=-0.405;VQSLOD=4.6444;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,2943	1/1:1,7:8:18.02:325,18,0	0/0:18,0:15:29.18:0,29,526	0/0:12,0:11:14.78:0,15,254	0/0:50,0:50:99:0,126,2845	1/1:6,16:22:15.53:670,16,0	1/1:3,15:18:48.10:899,48,0	1/1:27,1:28:62.26:550,62,0	0/0:19,0:19:57.18:0,57,1526	0/0:31,0:32:86.98:0,87,2064	0/0:30,0:30:81.13:0,81,1929	0/0:16,0:16:45.10:0,45,1149	0/0:20,0:20:54.16:0,54,1417	0/0:18,0:18:50.95:0,51,1177	0/0:19,0:19:52.69:0,53,1298	0/0:16,0:17:43.52:0,44,1058	0/0:12,0:12:36.11:0,36,870	0/0:25,0:25:69.14:0,69,1712	1/1:10,1:11:30.61:257,31,0	1/1:22,1:22:33.41:309,33,0	1/1:4,2:6:14.88:166,15,0	0/0:34,0:34:93.15:0,93,2282	0/0:24,0:24:27.31:0,27,1573	0/0:13,0:13:36.12:0,36,1018	1/1:4,11:14:18.11:595,18,0	0/0:27,0:28:77.59:0,78,1932	1/1:26,1:26:46.30:565,46,0	0/0:9,0:9:27.02:0,27,590
chr10	105137294	.	AAAAG	A	4946.18	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.377;DP=588;FS=1.196;HRun=0;HaplotypeScore=129.9220;InbreedingCoeff=0.9908;MQ=67.51;MQ0=0;MQRankSum=-8.878;QD=31.91;ReadPosRankSum=-0.877;VQSLOD=4.8794;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,2498	1/1:7,0:7:18.02:216,18,0	0/0:18,0:14:29.17:0,29,455	0/0:11,0:10:13.92:0,14,206	0/0:49,0:49:99:0,121,2394	1/1:20,1:21:14.72:457,15,0	1/1:17,1:17:48.16:651,48,0	1/1:4,24:28:74.98:900,75,0	0/0:20,0:20:59.93:0,60,1303	0/0:31,0:31:84.12:0,84,1702	0/0:31,0:31:83.87:0,84,1665	0/0:16,0:16:44.61:0,45,966	0/0:20,0:20:54.14:0,54,1193	0/0:18,0:18:50.71:0,51,1002	0/0:19,0:19:52.41:0,52,1086	0/0:17,0:17:42.38:0,42,895	0/0:12,0:12:36.08:0,36,724	0/0:25,0:25:69.13:0,69,1443	1/1:2,9:11:32.98:391,33,0	1/1:2,20:21:36:541,36,0	1/1:4,3:7:17.89:258,18,0	0/0:34,0:34:92.74:0,93,1921	0/0:23,0:23:27.26:0,27,1316	0/0:13,0:13:36.11:0,36,861	1/1:14,1:14:24.76:400,25,0	0/0:28,0:28:75.68:0,76,1626	1/1:7,19:25:60.69:1134,61,0	0/0:9,0:9:27.02:0,27,497
chr10	105137500	.	G	GC	4779.42	PASS	AB=0.819;AC=20;AF=0.357;AN=56;BaseQRankSum=17.972;DP=946;FS=7.615;HRun=0;HaplotypeScore=129.2511;InbreedingCoeff=-0.5642;MQ=58.27;MQ0=12;MQRankSum=-14.974;QD=6.51;ReadPosRankSum=3.581;VQSLOD=4.2171;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:44,8:47:99:125,0,1359	0/0:8,2:9:6.09:0,6,276	0/0:29,0:19:33.87:0,34,643	0/0:28,0:26:75.15:0,75,981	0/1:28,9:34:99:240,0,837	0/1:19,14:33:99:569,0,618	0/1:29,11:38:99:426,0,783	0/1:28,8:32:99:222,0,810	0/0:34,0:34:93.03:0,93,1260	0/1:41,5:42:99:109,0,1432	0/1:26,6:32:99:138,0,893	0/1:19,8:27:99:256,0,679	0/1:26,10:35:99:314,0,944	0/1:26,5:29:99:152,0,878	0/1:39,7:45:99:196,0,1417	0/1:25,5:30:99:111,0,844	0/1:18,10:28:99:341,0,594	0/1:31,12:43:99:405,0,1146	0/0:26,0:24:69.23:0,69,964	0/0:31,0:30:90.27:0,90,1230	0/0:33,0:33:93.28:0,93,1266	0/1:23,5:27:81.54:82,0,829	0/1:21,9:29:99:212,0,657	0/1:37,15:52:99:425,0,1403	0/1:24,7:31:99:242,0,857	0/1:34,5:38:99:127,0,1231	0/1:33,4:37:84.21:84,0,1189	0/0:18,2:17:48.16:0,48,670
chr10	105138856	.	T	TCACA	1199.68	PASS	AB=0.781;AC=11;AF=0.204;AN=54;BaseQRankSum=-0.210;DP=853;FS=0.000;HRun=0;HaplotypeScore=179.6661;InbreedingCoeff=0.5993;MQ=66.22;MQ0=13;MQRankSum=-0.651;QD=7.45;ReadPosRankSum=-0.616;VQSLOD=2.7324;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:41.10:0,41,472	0/1:9,0:18:25.46:77,0,25	./.	0/0:43,0:26:1.81:0,2,5	0/0:18,0:22:44.78:0,45,566	0/0:26,0:28:21.75:0,22,413	0/0:32,0:33:43.41:0,43,448	1/1:25,0:19:9.01:96,9,0	0/0:29,0:31:47.93:0,48,588	0/0:29,0:31:43.66:0,44,492	0/0:15,0:15:23.95:0,24,293	0/0:45,0:48:47.41:0,47,1021	0/0:21,0:23:27.01:0,27,569	0/0:24,0:24:33.02:0,33,438	0/0:45,0:48:69:0,69,1020	0/0:38,0:42:89.81:0,90,1313	0/0:24,0:25:42.95:0,43,584	0/0:25,0:27:42.72:0,43,684	1/1:18,0:18:7.64:77,8,0	0/1:14,10:27:31.17:148,0,31	1/1:19,11:37:14.27:234,14,0	0/0:31,0:33:23.49:0,23,277	0/0:26,0:26:39.37:0,39,531	0/0:16,0:46:54.05:0,54,498	0/0:24,0:24:16.86:0,17,227	0/0:28,0:31:35.73:0,36,461	1/1:13,13:30:34.09:716,34,0	0/1:6,0:6:11.34:11,0,85
chr10	105139212	.	T	TCA	5002.43	PASS	AB=0.621;AC=11;AF=0.196;AN=56;BaseQRankSum=-10.409;DP=1034;FS=3.206;HRun=0;HaplotypeScore=164.4802;InbreedingCoeff=0.8186;MQ=55.40;MQ0=14;MQRankSum=1.653;QD=21.84;ReadPosRankSum=-1.469;VQSLOD=4.8566;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:36:89.49:0,89,972	1/1:6,0:13:15:132,15,0	0/0:57,0:37:53.17:0,53,566	0/0:40,0:21:23.49:0,23,222	0/0:21,0:22:0.97:0,1,455	0/0:4,0:23:44.83:0,45,217	0/0:9,0:33:68.18:0,68,335	1/1:27,21:50:68.15:982,68,0	0/0:40,0:41:80.99:0,81,927	0/0:47,0:48:99:0,110,1262	0/0:19,0:19:35.56:0,36,388	0/0:44,0:44:84.51:0,85,1092	0/0:32,0:32:69.17:0,69,794	0/0:28,0:28:66.17:0,66,761	0/0:50,0:51:99:0,111,1267	0/0:44,0:45:99:0,104,1225	0/0:32,0:32:66.19:0,66,775	0/0:42,0:42:87.15:0,87,992	1/1:13,19:31:30.26:900,30,0	0/1:14,22:35:14.33:754,0,14	1/1:20,47:69:75.97:1650,76,0	0/0:29,0:31:63:0,63,706	0/0:27,0:27:60.18:0,60,715	0/0:44,0:44:99:0,105,1225	0/0:7,0:35:67.97:0,68,330	0/0:49,0:51:99:0,117,1315	1/1:14,15:28:6.39:584,6,0	0/0:21,0:22:30.45:0,30,548
chr10	105139996	.	GCA	G	244.04	PASS	AB=0.903;AC=22;AF=0.458;AN=48;BaseQRankSum=4.790;DP=531;FS=19.387;HRun=0;HaplotypeScore=75.5983;InbreedingCoeff=0.1043;MQ=66.37;MQ0=10;MQRankSum=-1.191;QD=0.81;ReadPosRankSum=-1.363;VQSLOD=-0.0678;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:8.84:0,9,88	1/1:6,4:10:3.01:32,3,0	./.	./.	0/1:11,1:12:8.22:8,0,9	1/1:6,0:13:2.84:14,3,0	1/1:17,0:23:2.84:14,3,0	./.	0/0:14,0:14:12.02:0,12,157	0/0:15,0:14:15:0,15,174	./.	0/1:11,3:13:23.30:23,0,77	0/0:11,0:11:14.87:0,15,171	0/0:12,0:12:18.04:0,18,242	0/1:16,0:19:16.65:17,0,259	0/1:15,1:17:11.33:11,0,134	0/1:17,0:17:14.32:14,0,106	1/1:19,7:27:11.78:120,12,0	1/1:18,0:18:2.80:13,3,0	1/1:6,0:9:2.84:14,3,0	0/1:49,0:49:20.86:25,0,21	0/0:12,0:16:5.99:0,6,49	0/0:14,0:13:15.04:0,15,201	0/1:35,6:42:45.87:46,0,278	0/1:10,0:13:16.25:16,0,53	0/0:16,0:17:0.81:0,1,81	1/1:14,0:14:5.68:28,6,0	0/0:9,0:9:14.02:0,14,104
chr10	105140633	.	C	CT	3992.93	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-8.770;DP=504;FS=1.325;HRun=3;HaplotypeScore=50.8258;InbreedingCoeff=0.9800;MQ=75.29;MQ0=0;MQRankSum=0.826;QD=32.20;ReadPosRankSum=-0.440;VQSLOD=3.3902;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1152	1/1:0,5:5:12.04:165,12,0	0/0:18,0:17:31.46:0,31,364	0/0:18,0:17:24.95:0,25,244	0/0:24,0:24:53.94:0,54,564	0/0:24,0:24:72.20:0,72,839	0/0:13,0:13:36.08:0,36,400	1/1:3,33:36:96.20:1176,96,0	0/0:13,0:13:39.06:0,39,420	0/0:21,0:21:54.12:0,54,606	0/0:15,0:15:42.11:0,42,484	0/0:16,0:16:48.14:0,48,564	0/0:10,0:10:24.06:0,24,278	0/0:18,0:18:45.10:0,45,506	0/0:16,0:16:48.08:0,48,522	0/0:13,0:13:33.10:0,33,395	0/0:27,0:27:75.17:0,75,850	0/0:10,0:10:30.02:0,30,320	1/1:2,7:9:21.05:258,21,0	1/1:0,26:27:77.99:946,78,0	1/1:2,19:21:45.15:621,45,0	0/0:11,0:11:30.09:0,30,357	0/0:25,0:25:72.19:0,72,830	0/0:19,0:19:54.08:0,54,596	0/0:14,0:14:36.07:0,36,406	0/0:17,0:17:48.14:0,48,566	1/1:2,24:26:60.20:827,60,0	0/0:3,0:3:9.03:0,9,107
chr10	105141412	.	GA	G	1041.85	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.839;DP=272;FS=0.000;HRun=10;HaplotypeScore=35.0403;InbreedingCoeff=0.8024;MQ=59.34;MQ0=16;MQRankSum=-1.796;QD=15.79;ReadPosRankSum=-0.650;VQSLOD=2.8098;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:16:42.03:0,42,437	1/1:0,2:2:3:26,3,0	0/0:21,0:6:17.73:0,18,156	0/0:15,0:1:2.99:0,3,24	0/0:6,0:6:15.04:0,15,166	0/0:14,0:14:36.09:0,36,390	0/0:9,0:9:18.05:0,18,199	1/1:5,21:26:62.97:546,63,0	0/0:11,0:11:14.97:0,15,151	0/0:3,0:3:6.01:0,6,60	0/0:8,0:8:21.06:0,21,232	0/0:4,0:4:12.03:0,12,133	0/0:10,0:10:20.97:0,21,216	0/0:9,0:9:24.06:0,24,266	0/0:5,0:5:12.03:0,12,133	0/0:6,0:6:12.03:0,12,133	0/0:15,0:15:28.59:0,29,313	0/0:12,0:12:24.01:0,24,243	1/1:5,6:11:21:153,21,0	1/1:3,7:10:20.99:182,21,0	1/1:4,2:5:8.98:74,9,0	0/0:4,0:4:3.01:0,3,33	0/0:7,0:7:9.02:0,9,100	0/0:6,0:6:12.03:0,12,133	0/0:7,0:7:11.31:0,11,92	0/0:13,0:13:27.07:0,27,299	1/1:2,9:11:26.99:234,27,0	0/0:3,0:3:9.02:0,9,99
chr10	105141423	.	G	GATAA	421.53	PASS	AC=14;AF=0.412;AN=34;BaseQRankSum=3.150;DP=240;FS=1.243;HRun=0;HaplotypeScore=48.4843;InbreedingCoeff=0.5646;MQ=59.33;MQ0=6;MQRankSum=-3.882;QD=4.05;ReadPosRankSum=-2.026;VQSLOD=0.9311;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:19:6:73,6,0	./.	./.	./.	0/0:6,0:6:3.01:0,3,46	0/0:13,0:13:18.06:0,18,271	0/0:8,0:8:6.02:0,6,90	1/1:38,0:38:6.19:15,6,0	./.	0/0:5,0:5:5.30:0,5,87	0/0:8,0:8:6.02:0,6,91	./.	0/0:7,0:7:3.01:0,3,46	0/0:8,0:8:6.02:0,6,91	./.	0/0:4,0:4:6.02:0,6,91	1/1:11,3:15:3.01:70,3,0	1/1:12,0:13:14.90:137,15,0	./.	./.	./.	./.	1/1:3,0:3:3.01:59,3,0	./.	0/0:4,0:5:2.22:0,2,7	0/0:11,0:11:9.03:0,9,137	1/1:10,0:10:6.01:58,6,0	1/1:2,2:4:6.02:139,6,0
chr10	105141461	.	TA	T	1379.68	PASS	AB=0.641;AC=8;AF=0.148;AN=54;BaseQRankSum=3.242;DP=216;FS=1.401;HRun=3;HaplotypeScore=25.4680;InbreedingCoeff=0.5165;MQ=51.21;MQ0=1;MQRankSum=-2.648;QD=18.64;ReadPosRankSum=-2.682;VQSLOD=2.1966;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:51.13:0,51,667	0/0:3,0:3:9.02:0,9,109	./.	0/0:4,0:3:9.03:0,9,117	0/0:4,0:4:12.04:0,12,168	0/0:13,0:13:39.13:0,39,549	0/0:5,0:5:15.05:0,15,209	0/1:24,21:43:21.64:830,0,22	0/0:3,0:3:9.03:0,9,121	0/0:7,0:7:21.07:0,21,286	0/0:4,0:4:12.04:0,12,167	0/0:3,0:3:9.03:0,9,118	0/0:5,0:5:15.04:0,15,194	0/0:3,0:3:9.03:0,9,127	0/0:3,0:3:9.03:0,9,124	0/0:4,0:4:12.04:0,12,168	0/0:15,0:15:39.06:0,39,483	0/0:14,0:14:42.13:0,42,569	1/1:2,12:13:22.02:428,22,0	1/1:1,2:3:6.49:76,6,0	0/1:1,2:3:6.74:31,0,7	0/0:2,0:2:6.02:0,6,81	0/0:1,0:1:3.01:0,3,35	0/0:1,0:1:3.01:0,3,39	0/0:5,0:5:12.93:0,13,165	0/0:8,0:8:24.07:0,24,319	1/1:3,6:9:14.31:156,14,0	0/0:13,0:12:36.10:0,36,460
chr10	105142977	.	T	TACAG	616.53	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.952;DP=918;FS=1.069;HRun=0;HaplotypeScore=177.9919;InbreedingCoeff=0.9989;MQ=61.66;MQ0=3;MQRankSum=-1.080;QD=34.25;ReadPosRankSum=0.730;VQSLOD=3.5889;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:51:99:0,135,2224	1/1:5,13:18:29.76:711,30,0	0/0:35,0:28:60.48:0,60,929	0/0:23,0:20:49.75:0,50,743	0/0:39,0:39:99:0,106,1805	0/0:25,0:25:66.20:0,66,1126	0/0:32,0:32:87.20:0,87,1363	0/0:43,0:43:96.13:0,96,1456	0/0:24,0:24:66.17:0,66,1062	0/0:48,0:48:99:0,134,2275	0/0:30,0:30:87.06:0,87,1332	0/0:27,0:27:77.80:0,78,1274	0/0:37,0:37:99:0,105,1634	0/0:36,0:36:99:0,102,1741	0/0:39,0:39:99:0,111,1822	0/0:32,0:32:87.27:0,87,1522	0/0:32,0:32:87.12:0,87,1384	0/0:19,0:19:54.12:0,54,881	0/0:27,0:26:61.72:0,62,895	0/0:35,0:35:75.23:0,75,1146	0/0:34,0:34:62.92:0,63,879	0/0:28,0:27:81.21:0,81,1308	0/0:37,0:37:99:0,102,1611	0/0:34,0:34:99:0,99,1656	0/0:30,0:30:84.23:0,84,1367	0/0:55,0:55:99:0,153,2465	0/0:37,0:37:75.14:0,75,1107	0/0:10,0:10:30.09:0,30,503
chr10	105142981	.	TACAGACAG	T	4610.02	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.897;DP=916;FS=2.710;HRun=0;HaplotypeScore=235.7438;InbreedingCoeff=0.9984;MQ=59.82;MQ0=5;MQRankSum=-6.297;QD=26.80;ReadPosRankSum=-2.151;VQSLOD=4.3450;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:99:0,114,4020	0/0:18,0:18:34.88:0,35,1169	0/0:33,0:25:35.15:0,35,890	0/0:23,0:20:27.05:0,27,762	0/0:40,0:40:90.29:0,90,3200	0/0:25,0:25:72.21:0,72,2434	0/0:30,0:30:66.23:0,66,2527	1/1:24,17:41:51.11:734,51,0	0/0:24,0:24:60.21:0,60,2076	0/0:47,0:47:99:0,99,3734	0/0:32,0:32:66.23:0,66,2277	0/0:29,0:29:72.25:0,72,2436	0/0:35,0:35:81.28:0,81,2921	0/0:37,0:37:84.27:0,84,2987	0/0:36,0:36:96.32:0,96,3484	0/0:29,0:29:69.22:0,69,2661	0/0:33,0:33:78.25:0,78,2605	0/0:21,0:20:39.12:0,39,1480	1/1:12,13:24:38.99:802,39,0	1/1:7,28:35:60.20:1496,60,0	1/1:36,1:37:20.67:280,21,0	0/0:29,0:28:66.23:0,66,2363	0/0:40,0:40:84.27:0,84,2857	0/0:38,0:38:84.29:0,84,2919	0/0:32,0:32:69.22:0,69,2373	0/0:54,0:54:99:0,126,4196	1/1:8,26:34:51.17:1297,51,0	0/0:10,0:10:27.09:0,27,1052
chr10	105143721	.	G	GACTGTCTCAA	21546.16	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-9.266;DP=684;FS=6.280;HRun=0;HaplotypeScore=177.0843;InbreedingCoeff=0.9948;MQ=65.04;MQ0=0;MQRankSum=-17.211;QD=96.62;ReadPosRankSum=-3.597;VQSLOD=3.3666;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.29:0,90,2703	0/0:17,0:17:51.18:0,51,1689	0/0:19,0:19:54.15:0,54,1355	0/0:5,0:5:12.02:0,12,294	0/0:23,0:23:66.21:0,66,2162	1/1:4,26:34:72.12:3401,72,0	1/1:8,13:24:53.88:1914,54,0	1/1:17,17:38:99:4547,105,0	0/0:29,0:29:81.26:0,81,2576	0/0:30,0:30:90.30:0,90,2807	0/0:18,0:18:54.19:0,54,1780	0/0:20,0:20:60.21:0,60,1969	0/0:28,0:28:81.28:0,81,2617	0/0:29,0:29:87.30:0,87,2702	0/0:27,0:27:81.22:0,81,2370	0/0:31,0:31:87.28:0,87,2697	0/0:26,0:26:78.22:0,78,2400	0/0:20,0:20:54.19:0,54,1740	1/1:7,6:15:36.08:1269,36,0	1/1:5,21:29:63.02:2557,63,0	1/1:7,9:19:32.98:1279,33,0	0/0:23,0:23:66.23:0,66,2189	0/0:25,0:25:72.25:0,72,2208	0/0:19,0:19:54.18:0,54,1669	1/1:6,24:32:75.04:3326,75,0	0/0:26,0:26:78.25:0,78,2477	1/1:6,18:29:69.15:3253,69,0	0/0:13,0:13:39.13:0,39,1215
chr10	105145767	.	GAGGGAGAC	G	984.58	PASS	AB=0.904;AC=6;AF=0.107;AN=56;BaseQRankSum=3.389;DP=824;FS=3.817;HRun=0;HaplotypeScore=188.6950;InbreedingCoeff=0.1287;MQ=48.87;MQ0=55;MQRankSum=-3.043;QD=6.12;ReadPosRankSum=-1.410;VQSLOD=2.5973;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:39:95.76:0,96,3297	0/0:12,0:12:27.09:0,27,974	0/0:38,0:6:18.03:0,18,299	0/0:59,0:6:0.73:0,1,10	0/0:28,0:26:50.98:0,51,1402	0/0:28,0:21:13.83:0,14,132	1/1:29,0:24:4.19:89,4,0	0/0:58,0:51:28.89:0,29,3442	0/0:23,0:23:66.21:0,66,2123	0/0:35,0:33:99:0,99,3369	0/0:11,0:11:27.09:0,27,882	0/0:24,0:24:69.14:0,69,2467	0/0:28,0:25:66.22:0,66,2263	0/0:25,0:24:64.93:0,65,2147	0/0:34,0:33:90.25:0,90,3043	0/0:32,0:30:84.11:0,84,2854	0/0:23,0:23:63.19:0,63,2079	0/0:23,0:23:69.19:0,69,2250	0/1:35,1:33:87.06:87,0,1944	0/1:21,3:20:99:131,0,830	0/1:37,2:34:34.20:34,0,1084	0/0:21,0:20:51.18:0,51,1971	0/0:19,0:18:47.11:0,47,1537	0/0:46,0:46:99:0,117,3933	0/0:11,0:10:3.01:0,3,76	0/0:25,0:18:51.13:0,51,1487	0/1:25,8:30:99:763,0,968	0/0:14,0:12:36.12:0,36,1218
chr10	105145813	.	C	CAG	2590.16	PASS	AB=0.571;AC=9;AF=0.161;AN=56;BaseQRankSum=1.131;DP=735;FS=8.265;HRun=0;HaplotypeScore=104.9197;InbreedingCoeff=0.7814;MQ=49.49;MQ0=38;MQRankSum=-3.651;QD=18.50;ReadPosRankSum=-1.585;VQSLOD=3.2504;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:42:87.23:0,87,1070	0/0:13,0:13:23.96:0,24,297	0/0:17,0:1:2.68:0,3,11	0/0:38,0:2:3.01:0,3,35	0/0:20,0:19:29.75:0,30,365	0/0:21,0:16:15.04:0,15,183	0/0:34,0:29:50.63:0,51,621	1/1:27,13:38:12.94:676,13,0	0/0:23,0:23:57.18:0,57,720	0/0:35,0:32:75.22:0,75,928	0/0:16,0:16:39.10:0,39,466	0/0:29,0:29:63.17:0,63,774	0/0:23,0:20:45.12:0,45,555	0/0:25,0:24:48.12:0,48,582	0/0:34,0:35:81.21:0,81,975	0/0:28,0:27:60.04:0,60,736	0/0:21,0:20:51.13:0,51,630	0/0:22,0:22:39.26:0,39,703	1/1:9,10:18:33.09:524,33,0	1/1:5,10:15:23.99:382,24,0	1/1:14,23:35:30.06:474,30,0	0/0:20,0:19:42.02:0,42,533	0/0:21,0:20:48.14:0,48,597	0/0:40,0:39:93.13:0,93,1181	0/0:21,0:19:21.06:0,21,262	0/0:31,0:24:54.12:0,54,655	0/1:6,18:23:83.39:696,0,83	0/0:14,0:13:32.91:0,33,379
chr10	105145840	.	GGA	G	35.59	PASS	AB=0.928;AC=8;AF=0.143;AN=56;BaseQRankSum=4.324;DP=754;FS=0.831;HRun=0;HaplotypeScore=111.3671;InbreedingCoeff=-0.1561;MQ=56.29;MQ0=18;MQRankSum=-0.513;QD=0.14;ReadPosRankSum=-0.376;VQSLOD=2.1731;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:34:11.81:0,12,855	0/1:10,5:15:42.52:43,0,357	0/1:34,1:11:20.17:20,0,125	0/1:68,1:19:22.95:23,0,208	0/0:23,0:22:48.15:0,48,747	0/0:16,0:14:24.08:0,24,387	0/0:29,1:29:24.74:0,25,834	0/0:34,0:32:26.80:0,27,599	0/1:27,2:29:24.76:25,0,547	0/1:32,1:32:0.02:0,0,895	0/1:16,1:17:3.26:3,0,444	0/0:27,0:27:69.21:0,69,1049	0/0:20,1:21:14.75:0,15,730	0/0:15,0:15:39.10:0,39,578	0/0:38,1:39:59.88:0,60,1396	0/0:21,0:21:48.15:0,48,752	0/1:24,3:26:18.60:19,0,717	0/0:20,0:20:11.48:0,11,682	0/0:22,0:20:40.63:0,41,421	0/0:19,0:19:8.61:0,9,399	0/0:34,0:32:39.02:0,39,419	0/0:20,1:21:8.74:0,9,594	0/0:20,0:20:54.18:0,54,865	0/0:36,1:37:69.28:0,69,1283	0/1:27,1:28:27.44:27,0,565	0/0:27,0:26:42.14:0,42,670	0/0:22,0:22:39.08:0,39,421	0/0:14,0:12:24.08:0,24,385
chr10	105146926	.	GGGAAAGGAAA	G	40.24	PASS	AC=2;AF=0.042;AN=48;BaseQRankSum=2.072;DP=271;FS=0.000;HRun=0;HaplotypeScore=69.5676;InbreedingCoeff=0.3786;MQ=46.98;MQ0=42;MQRankSum=-2.215;QD=6.71;ReadPosRankSum=-0.337;VQSLOD=1.4195;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:4:9.03:0,9,248	./.	./.	0/0:33,0:4:0:0,0,0	0/0:4,0:4:9.03:0,9,316	1/1:2,4:5:6.02:119,6,0	./.	./.	0/0:8,0:7:18.06:0,18,617	0/0:5,0:4:9.03:0,9,280	0/0:2,0:2:3.01:0,3,96	0/0:4,0:3:9.03:0,9,335	0/0:8,0:7:16.61:0,17,541	0/0:1,0:1:3.01:0,3,83	0/0:4,0:2:6.02:0,6,212	0/0:5,0:4:9.03:0,9,290	0/0:15,0:15:42.12:0,42,1338	0/0:8,0:5:6.02:0,6,207	0/0:19,0:14:9.03:0,9,257	0/0:14,0:12:24.08:0,24,613	0/0:15,0:12:13.23:0,13,185	0/0:5,0:4:6.02:0,6,186	0/0:3,0:2:6.02:0,6,156	0/0:13,0:12:26.88:0,27,788	0/0:2,0:2:1.25:0,1,3	0/0:10,0:7:21.06:0,21,656	0/0:13,0:13:24.08:0,24,626	0/0:5,0:4:9.03:0,9,308
chr10	105147566	.	TG	T	1583.76	PASS	AB=0.913;AC=27;AF=0.482;AN=56;BaseQRankSum=6.499;DP=535;FS=32.272;HRun=12;HaplotypeScore=86.5198;InbreedingCoeff=0.3230;MQ=84.43;MQ0=5;MQRankSum=-1.558;QD=4.27;ReadPosRankSum=3.396;VQSLOD=-0.0059;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:30,2:33:14.21:14,0,228	1/1:8,4:13:13.79:98,14,0	0/0:51,1:29:1.97:0,2,124	0/1:34,1:28:43.67:44,0,97	0/1:11,5:16:59.26:59,0,71	1/1:7,2:24:34.47:129,34,0	1/1:3,0:21:32.58:94,33,0	1/1:7,10:17:26.87:208,27,0	0/1:17,2:19:2.20:2,0,160	0/0:11,0:11:9:0,9,82	0/0:14,0:14:13.21:0,13,103	0/0:12,0:18:2.84:0,3,14	0/0:10,0:10:12.02:0,12,118	0/0:12,1:13:0.74:0,1,162	0/1:19,1:20:5.22:5,0,116	0/0:12,0:12:16.95:0,17,196	0/1:32,2:35:2.25:2,0,360	0/1:12,3:16:42.69:43,0,140	1/1:5,10:16:28.88:211,29,0	1/1:8,9:17:26.87:209,27,0	1/1:4,13:17:37.90:285,38,0	0/0:14,0:14:12.01:0,12,116	0/1:19,0:19:31.40:31,0,68	0/0:15,0:15:27.05:0,27,274	1/1:5,0:17:24.44:71,24,0	0/1:17,1:18:2.32:2,0,134	1/1:2,15:18:34.90:261,35,0	0/0:5,0:5:2.97:0,3,20
chr10	105149217	.	CTAAG	C	6727.18	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.153;DP=709;FS=0.366;HRun=0;HaplotypeScore=120.3916;InbreedingCoeff=0.9954;MQ=79.25;MQ0=0;MQRankSum=-7.643;QD=50.96;ReadPosRankSum=-0.502;VQSLOD=5.5773;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,148,3998	0/0:7,0:7:21.07:0,21,575	0/0:19,0:19:48.16:0,48,1195	0/0:21,0:21:38.14:0,38,1040	0/0:19,0:19:57.20:0,57,1485	0/0:25,0:25:72.25:0,72,1959	0/0:24,0:24:63.22:0,63,1688	1/1:4,20:24:60.21:1159,60,0	0/0:21,0:21:63.22:0,63,1725	0/0:32,0:32:87.30:0,87,2337	0/0:23,0:23:66.21:0,66,1737	0/0:35,0:35:99:0,105,2823	0/0:29,0:29:81.28:0,81,2168	0/0:23,0:23:69.23:0,69,1835	0/0:35,0:34:99:0,105,2800	0/0:26,0:26:78.27:0,78,2041	0/0:25,0:25:75.26:0,75,2042	0/0:31,0:31:93.32:0,93,2515	1/1:0,20:20:57.16:1036,57,0	1/1:1,29:30:75.26:1453,75,0	1/1:0,25:25:69.24:1337,69,0	0/0:31,0:31:90.27:0,90,2401	0/0:24,0:24:69.21:0,69,1775	0/0:25,0:25:75.26:0,75,2053	0/0:26,0:26:75.26:0,75,2055	0/0:22,0:22:60.21:0,60,1606	1/1:1,32:33:90.04:1742,90,0	0/0:5,0:5:15.05:0,15,410
chr10	105149482	.	G	GT	10632.08	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-15.097;DP=727;FS=6.499;HRun=0;HaplotypeScore=68.3974;InbreedingCoeff=0.9999;MQ=86.35;MQ0=0;MQRankSum=-2.647;QD=44.49;ReadPosRankSum=-1.052;VQSLOD=4.6259;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,1991	1/1:1,11:12:33.11:527,33,0	0/0:25,0:25:69.20:0,69,928	0/0:24,0:23:59.57:0,60,780	0/0:26,0:26:75.23:0,75,1014	1/1:0,17:16:48.16:767,48,0	1/1:0,35:35:96.33:1534,96,0	1/1:2,26:28:78.25:1218,78,0	0/0:21,0:21:63.17:0,63,816	0/0:37,0:37:99:0,108,1491	0/0:20,0:20:59.55:0,60,785	0/0:26,0:26:75.24:0,75,1023	0/0:19,0:19:57.17:0,57,778	0/0:27,0:27:78.23:0,78,1055	0/0:30,0:30:90.30:0,90,1257	0/0:23,0:23:69.21:0,69,947	0/0:29,0:28:87.29:0,87,1216	0/0:25,0:25:75.21:0,75,1026	1/1:0,23:23:65.55:961,66,0	1/1:0,33:34:99:1554,99,0	1/1:1,41:42:99:1773,111,0	0/0:30,0:30:90.29:0,90,1232	0/0:18,0:18:51.17:0,51,713	0/0:27,0:27:81.17:0,81,1071	1/1:0,24:24:72.25:1150,72,0	0/0:23,0:23:69.18:0,69,941	1/1:0,24:24:72.25:1148,72,0	0/0:10,0:10:30.10:0,30,419
chr10	105151706	.	AC	A	2948.83	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=8.993;DP=735;FS=7.468;HRun=1;HaplotypeScore=83.4308;InbreedingCoeff=0.9953;MQ=67.15;MQ0=0;MQRankSum=-1.161;QD=14.60;ReadPosRankSum=-4.651;VQSLOD=1.2790;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,1424	0/0:8,0:8:24.04:0,24,274	0/0:20,0:20:24.32:0,24,389	0/0:12,1:13:18.95:0,19,169	0/0:22,0:22:62.95:0,63,743	1/1:3,16:19:32.69:423,33,0	1/1:1,28:29:54.18:742,54,0	1/1:28,3:31:44.26:351,44,0	0/0:33,0:33:90.13:0,90,1041	0/0:33,0:33:96.17:0,96,1148	0/0:14,0:14:36.02:0,36,412	0/0:31,0:31:80.96:0,81,948	0/0:26,0:26:75.13:0,75,847	0/0:28,0:28:78.10:0,78,906	0/0:40,0:40:99:0,117,1305	0/0:39,0:39:99:0,117,1377	0/0:25,0:24:67.56:0,68,801	0/0:17,0:17:39:0,39,448	1/1:16,0:16:17.16:99,17,0	1/1:27,0:27:25.34:236,25,0	1/1:25,5:30:45.25:482,45,0	0/0:35,0:35:99:0,100,1208	0/0:19,0:19:49.63:0,50,564	0/0:38,0:38:99:0,101,1267	1/1:1,15:16:19.79:345,20,0	0/0:35,0:35:99:0,105,1298	1/1:29,5:33:46.70:478,47,0	0/0:13,0:13:39.03:0,39,437
chr10	105151707	.	CA	C	318.36	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=9.593;DP=738;FS=6.499;HRun=11;HaplotypeScore=91.6234;InbreedingCoeff=0.2279;MQ=65.75;MQ0=0;MQRankSum=-0.655;QD=2.51;ReadPosRankSum=1.722;VQSLOD=-0.2860;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,1:44:89.54:0,90,1111	0/0:7,0:7:17.72:0,18,171	0/0:14,0:17:2.53:0,3,83	0/0:13,0:13:8.03:0,8,162	0/0:23,1:24:38.48:0,38,594	0/1:19,0:19:29.97:101,0,30	1/1:29,0:29:23.14:240,23,0	0/0:30,0:30:30.15:0,30,511	0/0:34,0:34:81.18:0,81,843	0/0:35,0:35:81.19:0,81,852	0/0:15,0:15:30.07:0,30,313	0/0:29,2:31:25.92:0,26,678	0/0:24,0:25:60.14:0,60,633	0/0:27,0:27:72.16:0,72,748	0/0:39,1:40:93.22:0,93,978	0/0:38,0:39:99:0,102,1069	0/0:23,2:26:25.69:0,26,643	0/0:17,0:17:8.46:0,8,295	0/0:16,0:16:39.01:0,39,373	0/0:26,0:26:52.04:0,52,489	0/1:29,0:29:25.73:26,0,331	0/0:36,0:36:93.22:0,93,982	0/0:18,1:19:42.09:0,42,435	0/0:39,1:40:80.62:0,81,1048	0/1:18,0:18:45.62:73,0,46	0/0:36,0:36:96.23:0,96,1017	0/1:32,0:31:3.40:3,0,430	0/0:13,0:13:30.04:0,30,302
chr10	105153176	.	T	TAA	2399.92	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=5.434;DP=404;FS=9.756;HRun=8;HaplotypeScore=67.3822;InbreedingCoeff=0.9188;MQ=67.03;MQ0=1;MQRankSum=-7.429;QD=20.00;ReadPosRankSum=-0.150;VQSLOD=1.1358;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:81.18:0,81,893	0/0:8,0:8:24.06:0,24,267	0/0:10,0:7:7.53:0,8,71	0/0:10,0:8:11.41:0,11,80	0/0:26,0:26:63.13:0,63,693	1/1:1,13:14:30.10:476,30,0	1/1:1,3:5:9.03:143,9,0	1/1:25,0:22:36:327,36,0	0/0:11,0:11:21.05:0,21,234	0/0:21,0:21:48.10:0,48,535	0/0:14,0:14:36.07:0,36,389	0/0:10,0:10:27.07:0,27,300	0/0:12,0:12:30.04:0,30,322	0/0:9,0:9:21.05:0,21,234	0/0:6,0:6:12.03:0,12,134	0/0:15,0:15:39.10:0,39,435	0/0:27,0:27:78.21:0,78,869	0/0:21,0:21:57.15:0,57,634	1/1:11,0:10:21.04:225,21,0	1/1:23,0:23:57.07:525,57,0	1/1:3,0:3:3.01:39,3,0	0/0:5,0:5:12.03:0,12,134	0/0:11,0:11:24.06:0,24,268	0/0:3,0:3:9.02:0,9,100	1/1:2,14:16:30.10:476,30,0	0/0:21,0:21:59.15:0,59,622	1/1:23,0:23:42.04:386,42,0	0/0:13,0:13:36.09:0,36,400
chr10	105153183	.	A	AAAAAG	5993.02	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=10.685;DP=420;FS=14.628;HRun=0;HaplotypeScore=85.8017;InbreedingCoeff=0.7361;MQ=64.49;MQ0=3;MQRankSum=-8.885;QD=46.82;ReadPosRankSum=-0.354;VQSLOD=4.0514;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:96.27:0,96,1706	0/0:8,0:8:24.08:0,24,478	0/0:8,0:5:8.22:0,8,124	0/0:10,0:8:11.99:0,12,145	0/0:27,0:26:72.19:0,72,1298	0/1:15,0:15:3.29:3,0,38	0/0:6,0:6:0.22:0,0,21	1/1:9,18:26:72.09:1829,72,0	0/0:8,0:8:24.07:0,24,443	0/0:20,0:20:57.17:0,57,1038	0/0:15,0:14:42.12:0,42,740	0/0:9,0:9:27.09:0,27,530	0/0:12,0:12:36.07:0,36,625	0/0:7,0:7:21.07:0,21,418	0/0:4,0:4:12.04:0,12,239	0/0:13,0:13:39.13:0,39,777	0/0:32,0:32:87.25:0,87,1625	0/0:22,0:22:63.19:0,63,1185	1/1:3,9:14:41.99:860,42,0	1/1:1,19:23:60.21:1839,60,0	1/1:1,3:5:6.02:78,6,0	0/0:5,0:5:15.04:0,15,266	0/0:8,0:8:24.08:0,24,477	0/0:4,0:4:12.03:0,12,206	0/1:15,0:15:6.13:6,0,16	0/0:23,0:23:69.17:0,69,1208	1/1:4,16:25:48.16:1377,48,0	0/0:15,0:15:42.10:0,42,763
chr10	105154948	.	CA	C	4260.29	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.660;DP=613;FS=1.518;HRun=9;HaplotypeScore=64.2456;InbreedingCoeff=0.9594;MQ=72.07;MQ0=0;MQRankSum=0.507;QD=23.03;ReadPosRankSum=-1.473;VQSLOD=5.2088;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:93.25:0,93,1059	0/0:12,0:12:33.10:0,33,381	0/0:18,0:18:11.94:0,12,290	0/0:16,0:15:13.59:0,14,190	0/0:20,0:20:57.16:0,57,649	1/1:2,14:16:39.01:357,39,0	1/1:4,21:25:63.03:576,63,0	1/1:4,25:29:68.53:630,69,0	0/0:25,0:25:75.20:0,75,847	0/0:26,0:26:69.20:0,69,783	0/0:15,0:15:36.10:0,36,407	0/0:18,0:18:49.34:0,49,533	0/0:14,0:14:36.11:0,36,415	0/0:25,0:25:75.21:0,75,857	0/0:27,0:27:72.21:0,72,831	0/0:23,0:23:69.20:0,69,788	0/0:49,0:49:99:0,132,1523	0/0:15,0:15:42.12:0,42,485	1/1:1,21:23:62.06:555,62,0	1/1:1,18:19:51.03:467,51,0	1/1:2,30:32:78.03:714,78,0	0/0:6,0:6:18.03:0,18,187	0/0:15,0:15:36.11:0,36,415	0/0:37,1:38:77.83:0,78,1139	1/1:0,18:18:51.03:467,51,0	0/0:19,0:20:53.98:0,54,595	1/1:5,18:23:54.02:494,54,0	0/0:9,1:10:2.64:0,3,284
chr10	105155100	.	TAC	T	104.22	PASS	AB=0.930;AC=13;AF=0.250;AN=52;BaseQRankSum=3.005;DP=531;FS=0.798;HRun=0;HaplotypeScore=81.4792;InbreedingCoeff=-0.1547;MQ=57.28;MQ0=14;MQRankSum=0.365;QD=0.44;ReadPosRankSum=0.473;VQSLOD=1.6221;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,1:30:6.64:7,0,314	0/0:2,0:5:8.56:0,9,78	./.	./.	0/1:18,1:19:9.30:9,0,294	0/0:15,0:13:2.84:0,3,40	0/0:34,0:31:5.83:0,6,67	0/0:21,0:20:9.40:0,9,67	0/0:19,0:19:33.16:0,33,581	0/0:17,0:17:33.09:0,33,458	0/1:11,1:12:15.46:15,0,138	0/0:8,0:8:15.05:0,15,226	0/1:10,1:11:12.31:12,0,250	0/1:15,1:16:3.42:3,0,348	0/1:23,0:24:20.90:21,0,396	0/1:10,1:11:9.30:9,0,294	0/1:21,2:23:63.13:63,0,364	0/1:25,1:24:0.78:1,0,591	1/1:14,0:14:7.80:34,8,0	0/0:9,0:9:11.79:0,12,105	0/0:29,0:27:10.53:0,11,115	0/1:12,2:14:12.32:12,0,230	0/0:8,0:8:18.04:0,18,250	0/1:35,2:38:53.97:54,0,637	0/0:15,0:15:6:0,6,52	0/0:20,0:21:5.87:0,6,303	0/0:19,0:18:35.96:0,36,308	0/0:13,0:13:19.88:0,20,271
chr10	105155137	.	AT	A	1516.35	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.780;DP=518;FS=20.307;HRun=1;HaplotypeScore=78.1945;InbreedingCoeff=0.9865;MQ=60.83;MQ0=7;MQRankSum=-3.417;QD=20.22;ReadPosRankSum=-1.324;VQSLOD=2.3256;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:40.82:0,41,678	0/0:7,0:7:17.83:0,18,208	0/0:32,0:23:52.28:0,52,853	0/0:18,0:13:21.06:0,21,430	0/0:19,0:19:41.91:0,42,648	0/0:11,4:14:23.88:0,24,348	0/0:19,11:27:35.63:0,36,546	1/1:2,9:11:33.09:428,33,0	0/0:24,0:24:68.97:0,69,1052	0/0:23,0:23:62.68:0,63,1004	0/0:13,0:13:36.08:0,36,505	0/0:9,0:8:21.06:0,21,304	0/0:13,0:13:33.11:0,33,491	0/0:17,0:17:44.96:0,45,692	0/0:22,0:21:57.09:0,57,872	0/0:22,0:22:66.22:0,66,1014	0/0:26,0:26:66.04:0,66,936	0/0:26,2:25:28.55:0,29,973	1/1:7,7:14:39.79:450,40,0	1/1:0,7:11:14.99:169,15,0	1/1:4,12:18:25.57:266,26,0	0/0:13,0:13:36.04:0,36,542	0/0:8,0:8:21.07:0,21,335	0/0:32,1:33:80.71:0,81,1216	0/0:9,5:14:15.04:0,15,216	0/0:16,0:16:48.14:0,48,705	1/1:1,6:17:38.90:378,39,0	0/0:20,0:19:43.61:0,44,799
chr10	105155160	.	C	CA	1324.09	PASS	AB=0.909;AC=11;AF=0.196;AN=56;BaseQRankSum=-0.152;DP=549;FS=3.147;HRun=11;HaplotypeScore=87.6463;InbreedingCoeff=0.8166;MQ=70.45;MQ0=1;MQRankSum=-3.778;QD=13.51;ReadPosRankSum=-6.575;VQSLOD=1.9403;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:27:48.75:0,49,357	0/1:9,1:10:15.54:16,0,76	0/0:27,0:24:39.25:0,39,266	0/0:18,0:17:20.16:0,20,147	0/0:20,0:21:40.80:0,41,308	0/0:12,0:12:28.89:0,29,215	0/0:25,0:26:28.43:0,28,391	1/1:3,14:17:45.04:435,45,0	0/0:22,0:22:11.47:0,11,271	0/0:20,0:21:38.80:0,39,302	0/0:9,0:10:0.42:0,0,142	0/0:16,0:16:38.77:0,39,296	0/0:14,0:15:31.86:0,32,236	0/0:19,0:19:38.79:0,39,299	0/0:24,0:26:27.89:0,28,376	0/0:23,0:23:56.55:0,57,440	0/0:27,1:28:41.23:0,41,499	0/0:19,0:19:49.85:0,50,377	1/1:6,18:25:50.07:485,50,0	1/1:5,4:9:12.01:117,12,0	1/1:6,12:18:18.04:183,18,0	0/0:15,0:15:28.10:0,28,229	0/0:19,0:19:38.79:0,39,301	0/0:31,0:32:77.61:0,78,598	0/0:14,0:14:26.72:0,27,201	0/0:15,3:18:11.34:0,11,271	1/1:9,9:19:29.58:263,30,0	0/0:19,0:20:31.82:0,32,238
chr10	105155317	.	A	AAATGAATGAATGAATG	7039.35	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=1.057;DP=611;FS=3.510;HRun=0;HaplotypeScore=257.3270;InbreedingCoeff=0.9288;MQ=74.56;MQ0=0;MQRankSum=-7.002;QD=51.76;ReadPosRankSum=-5.665;VQSLOD=3.3143;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:45.15:0,45,1723	0/0:1,0:14:39.13:0,39,1194	0/0:22,0:20:3.01:0,3,83	0/0:17,0:17:9.02:0,9,216	0/0:22,0:22:42.14:0,42,1461	0/0:22,0:22:42.14:0,42,1640	0/0:22,0:21:36.12:0,36,1254	1/1:44,0:43:46.04:1602,46,0	0/0:24,0:24:45.15:0,45,1825	0/0:24,0:24:51.17:0,51,1830	0/0:21,0:21:30.10:0,30,1223	0/0:11,0:11:21.07:0,21,831	0/0:23,0:23:36.10:0,36,1192	0/0:20,0:20:24.08:0,24,1022	0/0:23,0:24:42.14:0,42,1680	0/0:17,0:17:24.08:0,24,942	0/0:24,0:24:51.18:0,51,2204	0/0:15,0:15:18.06:0,18,701	1/1:25,4:31:36.12:1497,36,0	1/1:15,6:22:42.14:2325,42,0	1/1:16,0:16:9.03:510,9,0	0/0:18,0:18:39.13:0,39,1616	0/0:17,0:17:39.13:0,39,1589	0/0:22,0:22:42.10:0,42,1572	0/0:6,0:20:26.85:0,27,264	0/0:35,0:35:75.26:0,75,3006	1/1:21,2:23:21.07:1105,21,0	0/0:15,0:15:27.09:0,27,1177
chr10	105156068	.	AACG	A	3099.58	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.254;DP=296;FS=1.243;HRun=0;HaplotypeScore=44.9272;InbreedingCoeff=0.8971;MQ=86.11;MQ0=0;MQRankSum=-5.995;QD=47.69;ReadPosRankSum=-0.894;VQSLOD=4.6000;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.16:0,48,1096	0/0:1,0:1:3.01:0,3,74	0/0:15,0:15:45.14:0,45,1018	0/0:8,0:8:21.07:0,21,468	0/0:8,0:8:21.07:0,21,517	0/0:14,0:14:42.14:0,42,1009	0/0:11,0:11:33.11:0,33,803	1/1:0,19:19:57.16:963,57,0	0/0:8,0:8:24.07:0,24,537	0/0:9,0:9:27.09:0,27,664	0/0:7,0:7:21.07:0,21,491	0/0:10,0:10:30.10:0,30,738	0/0:10,0:10:27.09:0,27,665	0/0:7,0:7:21.05:0,21,467	0/0:9,0:9:27.09:0,27,665	0/0:9,0:9:27.09:0,27,665	0/0:13,0:13:39.13:0,39,933	0/0:19,0:19:57.20:0,57,1386	1/1:0,18:18:54.13:968,54,0	1/1:0,7:7:21.07:390,21,0	1/1:0,4:4:6.02:112,6,0	0/0:2,0:2:6.02:0,6,123	0/0:10,0:10:30.10:0,30,737	0/0:15,0:15:45.15:0,45,1082	0/0:5,0:5:15.05:0,15,369	0/0:21,0:21:63.22:0,63,1458	1/1:0,17:17:45.15:834,45,0	0/0:4,0:4:12.04:0,12,295
chr10	105156170	.	T	TTATGTGTA	1571.21	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=1.672;DP=225;FS=3.329;HRun=0;HaplotypeScore=64.4910;InbreedingCoeff=0.7753;MQ=81.38;MQ0=1;MQRankSum=-6.276;QD=30.22;ReadPosRankSum=-2.092;VQSLOD=2.8135;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:15.05:0,15,396	0/0:2,0:2:6.02:0,6,158	0/0:11,0:10:14.88:0,15,331	0/0:11,0:10:21.07:0,21,500	0/0:11,0:11:24.07:0,24,564	0/0:8,0:8:18.06:0,18,475	0/0:5,0:5:9:0,9,179	1/1:16,1:17:9.03:266,9,0	0/0:4,0:4:9.03:0,9,237	0/0:8,0:8:15.05:0,15,396	0/0:7,0:7:15.05:0,15,396	0/0:6,0:6:15.05:0,15,396	0/0:5,0:5:9.03:0,9,237	0/0:6,0:6:18.06:0,18,466	0/0:5,0:5:6.02:0,6,158	0/0:4,0:4:12.04:0,12,289	0/0:19,0:19:42.14:0,42,1108	0/0:14,0:14:15.01:0,15,334	1/1:9,3:12:12.04:458,12,0	1/1:4,6:10:9.03:380,9,0	1/1:3,1:4:3.01:127,3,0	0/0:3,0:3:9.03:0,9,237	0/0:5,0:5:15.05:0,15,395	0/0:5,0:5:15.05:0,15,396	0/0:4,0:4:12.04:0,12,304	0/0:10,0:10:24.08:0,24,598	1/1:5,4:9:12.04:493,12,0	0/0:11,0:11:27.09:0,27,680
chr10	105156202	.	TC	T	155.58	PASS	AC=6;AF=0.120;AN=50;BaseQRankSum=3.998;DP=140;FS=5.785;HRun=1;HaplotypeScore=29.3686;InbreedingCoeff=0.4891;MQ=83.09;MQ0=5;MQRankSum=-4.146;QD=12.96;ReadPosRankSum=0.664;VQSLOD=2.2174;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:5:12.02:0,12,166	./.	0/0:9,0:7:12.03:0,12,154	0/0:12,0:4:12.01:0,12,117	0/0:7,0:7:14.84:0,15,204	0/0:2,0:2:6.02:0,6,95	0/0:1,0:1:3.01:0,3,48	1/1:3,1:2:5.95:59,6,0	0/0:3,0:3:9.03:0,9,141	0/0:3,0:3:9.03:0,9,144	0/0:4,0:4:12.04:0,12,191	0/0:3,0:3:9.03:0,9,143	0/0:2,0:2:6.02:0,6,96	0/0:1,0:1:3.01:0,3,48	0/0:2,0:2:6.02:0,6,93	0/0:2,0:2:6.02:0,6,96	0/0:16,0:16:41.72:0,42,590	0/0:19,0:18:15.80:0,16,223	1/1:1,3:4:11.53:131,12,0	./.	./.	0/0:1,0:1:3.01:0,3,48	0/0:3,0:3:9.03:0,9,143	0/0:1,0:1:3.01:0,3,48	0/0:1,0:1:3.01:0,3,48	0/0:6,0:6:18.06:0,18,262	1/1:0,4:4:6.02:82,6,0	0/0:17,0:17:51.08:0,51,686
chr10	105156203	.	CATAT	C	613.12	PASS	AB=0.728;AC=10;AF=0.556;AN=18;BaseQRankSum=-0.849;DP=141;FS=1.702;HRun=0;HaplotypeScore=32.8842;MQ=82.12;MQ0=5;MQRankSum=0.413;QD=8.52;ReadPosRankSum=1.719;VQSLOD=1.2908;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:3:28,3,0	./.	./.	0/0:12,0:4:1.82:0,2,5	1/1:4,3:7:3.01:48,3,0	./.	./.	0/0:4,0:2:0:0,0,0	./.	./.	./.	0/0:4,0:4:3.01:0,3,61	./.	./.	./.	./.	1/1:12,4:16:1.81:187,2,0	0/1:7,13:20:12.51:110,0,13	./.	./.	./.	./.	./.	./.	./.	1/1:2,4:6:12.02:128,12,0	./.	0/1:14,1:17:77.83:198,0,78
chr10	105156302	.	ACACGCGCG	A	931.84	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=6.616;DP=234;FS=6.851;HRun=0;HaplotypeScore=67.7014;InbreedingCoeff=0.6260;MQ=58.28;MQ0=3;MQRankSum=-3.758;QD=18.64;ReadPosRankSum=-1.305;VQSLOD=0.6487;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:48.16:0,48,1957	0/1:8,0:8:12.84:13,0,34	0/0:7,0:6:15.03:0,15,149	0/0:8,0:7:8.17:0,8,101	0/0:4,0:4:12.02:0,12,372	0/0:3,0:3:3.01:0,3,121	0/0:6,0:6:11.79:0,12,361	1/1:3,0:12:35.25:488,35,0	0/0:5,0:5:11.64:0,12,440	0/0:7,0:7:21.05:0,21,761	0/0:8,0:8:24.08:0,24,762	0/0:2,0:2:3.01:0,3,85	0/0:3,0:3:6.02:0,6,207	0/0:5,0:5:12.04:0,12,399	0/0:7,0:7:21.04:0,21,627	0/0:7,0:7:21.07:0,21,814	0/0:24,0:24:66.20:0,66,2128	0/0:23,0:23:63.12:0,63,2010	1/1:1,1:6:15:343,15,0	1/1:1,2:5:3.01:44,3,0	1/1:2,14:16:5.73:108,6,0	0/0:5,0:4:9.03:0,9,349	0/0:2,0:1:3.01:0,3,128	0/0:8,0:8:24.08:0,24,917	./.	0/0:12,0:12:36.04:0,36,936	1/1:0,0:2:6.02:88,6,0	0/0:12,0:12:33.01:0,33,688
chr10	105156514	.	T	TGTACTCA	10078.10	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=-3.062;DP=536;FS=0.431;HRun=0;HaplotypeScore=119.7370;InbreedingCoeff=0.9365;MQ=98.52;MQ0=0;MQRankSum=-14.008;QD=75.78;ReadPosRankSum=-3.863;VQSLOD=4.2202;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,117,2963	0/0:4,0:4:12.04:0,12,311	0/0:30,0:30:87.27:0,87,2130	0/0:30,0:30:81.08:0,81,1835	0/0:6,0:6:18.06:0,18,444	1/1:2,9:15:30.10:1167,30,0	1/1:9,15:28:66.23:2520,66,0	1/1:16,13:30:73.13:2822,73,0	0/0:16,0:16:45.15:0,45,1139	0/0:8,0:8:24.08:0,24,615	0/0:2,0:2:6.02:0,6,147	0/0:21,0:21:57.20:0,57,1468	0/0:27,0:27:75.24:0,75,1860	0/0:28,0:28:78.27:0,78,1971	0/0:29,0:29:81.10:0,81,1999	0/0:26,0:25:69.24:0,69,1792	0/0:37,0:37:99:0,102,2544	0/0:31,0:31:87.26:0,87,2159	1/1:7,5:15:30.05:892,30,0	1/1:2,3:6:6.02:239,6,0	1/1:9,9:21:27.09:1026,27,0	0/0:2,0:2:6.01:0,6,103	./.	0/0:30,0:30:90.31:0,90,2307	1/1:1,5:7:15.05:597,15,0	0/0:18,0:18:51.18:0,51,1324	1/1:7,3:10:21.07:815,21,0	0/0:12,0:12:36.12:0,36,903
chr10	105156682	.	CTACTCTCGATAT	C	2616.32	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.498;DP=443;FS=19.993;HRun=0;HaplotypeScore=157.1860;InbreedingCoeff=0.9760;MQ=100.79;MQ0=0;MQRankSum=-8.153;QD=48.45;ReadPosRankSum=-0.199;VQSLOD=1.8002;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.25:0,72,4304	0/0:10,0:10:27.09:0,27,1600	0/0:28,0:28:78.27:0,78,4102	0/0:24,0:24:60.16:0,60,2754	0/0:11,0:11:30.10:0,30,1853	0/0:14,0:14:39.11:0,39,2109	0/0:26,0:26:74.99:0,75,4451	1/1:11,7:18:21.05:707,21,0	0/0:13,0:13:39.13:0,39,2287	0/0:13,0:13:39.13:0,39,2089	0/0:8,0:8:24.08:0,24,1401	0/0:18,0:18:51.18:0,51,3041	0/0:18,0:18:54.19:0,54,2943	0/0:19,0:19:57.20:0,57,3382	0/0:16,0:16:45.15:0,45,2635	0/0:19,0:19:57.20:0,57,3278	0/0:28,0:28:84.29:0,84,5071	0/0:20,0:20:60.21:0,60,3484	1/1:3,4:7:12.04:456,12,0	1/1:0,6:6:15.05:570,15,0	1/1:7,11:18:23.41:596,23,0	0/0:12,0:12:33.11:0,33,2038	0/0:7,0:7:21.07:0,21,1133	0/0:28,0:28:81.28:0,81,4695	0/0:6,0:6:18.06:0,18,998	0/0:17,0:17:48.16:0,48,2652	1/1:1,4:5:12.04:456,12,0	0/0:9,0:9:24.08:0,24,1310
chr10	105157394	.	CCT	C	256.88	PASS	AB=0.964;AC=16;AF=0.364;AN=44;BaseQRankSum=3.322;DP=618;FS=20.725;HRun=0;HaplotypeScore=85.9822;InbreedingCoeff=-0.4003;MQ=66.54;MQ0=18;MQRankSum=0.084;QD=0.72;ReadPosRankSum=1.460;VQSLOD=0.1958;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:35,1:34:11.04:11,0,178	0/0:11,0:11:3.01:0,3,44	./.	./.	0/1:14,0:14:1.22:9,0,1	1/1:20,0:21:2.60:10,3,0	./.	0/0:30,0:30:8:0,8,40	0/1:22,2:24:25.14:25,0,180	0/1:30,0:29:32.32:46,0,32	0/1:25,0:27:26.63:27,0,41	0/1:16,0:15:5.57:6,0,91	0/1:17,1:17:12.30:26,0,12	0/1:23,1:23:65.90:66,0,70	0/0:20,1:19:5.85:0,6,58	0/1:28,6:34:31.06:84,0,31	0/1:17,1:18:17.16:17,0,109	0/1:14,0:14:5.58:6,0,109	0/0:19,0:17:2.97:0,3,20	./.	./.	0/1:29,0:27:16.36:16,0,78	0/1:18,0:18:16.47:16,0,38	0/1:31,0:31:16.75:17,0,246	./.	0/0:26,0:25:19.10:0,19,190	0/0:9,0:9:0:0,0,0	0/0:21,0:19:5.91:0,6,46
chr10	105157455	.	GTC	G	340.23	PASS	AB=0.952;AC=8;AF=0.143;AN=56;BaseQRankSum=7.129;DP=588;FS=12.793;HRun=0;HaplotypeScore=105.4378;InbreedingCoeff=0.5203;MQ=47.06;MQ0=53;MQRankSum=-6.743;QD=3.51;ReadPosRankSum=-1.820;VQSLOD=0.6638;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:27:57.16:0,57,1026	0/0:7,0:7:21.06:0,21,368	0/0:16,0:4:9.69:0,10,96	0/0:29,0:4:6.02:0,6,98	0/0:20,0:18:31.73:0,32,674	0/0:21,0:17:2.84:0,3,20	0/1:28,0:16:11.16:14,0,11	1/1:12,7:12:18.54:210,19,0	0/0:23,0:22:51.01:0,51,851	0/0:39,0:34:98.70:0,99,1748	0/0:22,0:19:39.12:0,39,718	0/0:18,0:18:45.15:0,45,849	0/0:22,0:22:60.20:0,60,1106	0/0:23,0:22:45.21:0,45,753	0/0:20,0:17:42.14:0,42,809	0/0:25,0:24:54.13:0,54,913	0/0:21,0:19:48.05:0,48,842	0/0:14,0:13:36.02:0,36,652	0/1:13,4:10:47.09:138,0,47	0/1:14,0:11:0.01:0,0,0	0/1:9,0:7:0:0,0,0	0/0:16,0:14:24.08:0,24,462	0/0:13,0:11:30.10:0,30,578	0/0:39,0:38:78.70:0,79,1420	0/0:22,0:21:2.43:0,2,10	0/0:18,0:16:48.12:0,48,812	1/1:10,0:9:10.74:106,11,0	0/0:31,0:25:65.44:0,65,1257
chr10	105157463	.	GTC	G	119.71	PASS	AB=0.949;AC=9;AF=0.161;AN=56;BaseQRankSum=6.603;DP=600;FS=0.000;HRun=0;HaplotypeScore=104.8355;InbreedingCoeff=0.3919;MQ=47.73;MQ0=50;MQRankSum=-4.891;QD=1.04;ReadPosRankSum=-1.474;VQSLOD=1.8360;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:32:47.10:0,47,1141	0/0:6,0:6:18.06:0,18,348	0/0:23,0:4:10.27:0,10,146	0/0:32,2:4:11.57:0,12,126	0/0:20,0:18:31.74:0,32,675	0/0:22,0:18:2.84:0,3,20	0/1:28,0:16:12.51:13,0,61	0/1:17,0:10:45.81:46,0,93	0/0:19,0:18:42.14:0,42,761	0/0:40,0:35:99:0,105,1807	0/0:22,0:19:39.13:0,39,736	0/0:18,0:18:48.16:0,48,896	0/0:24,0:24:63.21:0,63,1175	0/0:20,0:19:30.47:0,30,734	0/0:19,0:18:45.15:0,45,854	0/0:22,0:21:54.16:0,54,937	0/0:23,0:21:54.17:0,54,949	0/0:17,0:17:46.04:0,46,809	0/1:15,3:10:45.31:91,0,45	0/1:13,0:10:0.01:0,0,0	0/1:7,1:6:0.15:0,0,0	0/0:16,0:15:30.10:0,30,549	0/0:16,0:14:39.13:0,39,704	0/0:36,0:35:72.22:0,72,1353	1/1:21,0:20:2.69:20,3,0	0/0:21,0:19:51.16:0,51,848	1/1:8,2:9:8.93:74,9,0	0/0:32,0:26:56.61:0,57,1298
chr10	105157465	.	CTG	C	317.62	PASS	AB=0.884;AC=10;AF=0.179;AN=56;BaseQRankSum=6.011;DP=597;FS=0.000;HRun=0;HaplotypeScore=102.4986;InbreedingCoeff=0.3536;MQ=48.30;MQ0=47;MQRankSum=-5.580;QD=2.35;ReadPosRankSum=-1.204;VQSLOD=1.1642;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:32:71.18:0,71,1192	0/0:7,0:7:21.07:0,21,390	0/1:22,1:4:4.88:5,0,126	0/0:32,0:4:11.95:0,12,138	0/0:20,0:18:34.71:0,35,675	0/0:22,0:18:2.84:0,3,20	0/1:26,1:15:40.36:40,0,41	0/1:12,4:9:8.65:126,0,9	0/0:19,0:18:42.10:0,42,728	0/0:40,0:35:99:0,99,1743	0/0:21,0:19:42.11:0,42,738	0/0:18,0:18:48.16:0,48,897	0/0:24,0:24:66.02:0,66,1185	0/0:20,0:19:10.78:0,11,685	0/0:19,0:18:45.15:0,45,852	0/0:21,0:20:54.05:0,54,953	0/0:23,0:21:54.18:0,54,947	0/0:17,0:17:46.04:0,46,809	0/1:16,2:9:55.71:108,0,56	0/1:7,6:10:0.01:0,0,0	0/1:7,0:6:0.15:0,0,0	0/0:16,0:16:36.09:0,36,597	0/0:18,0:16:45.10:0,45,733	0/0:36,0:35:69.24:0,69,1314	1/1:20,1:20:2.73:45,3,0	0/0:21,0:19:54.17:0,54,899	1/1:6,3:8:8.53:120,9,0	0/0:31,1:26:51.94:0,52,1289
chr10	105157467	.	G	GTC	220.52	PASS	AB=0.986;AC=9;AF=0.161;AN=56;BaseQRankSum=4.965;DP=595;FS=0.000;HRun=0;HaplotypeScore=105.2720;InbreedingCoeff=0.4189;MQ=48.67;MQ0=43;MQRankSum=-4.471;QD=2.00;ReadPosRankSum=-1.102;VQSLOD=1.9638;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:32:56.93:0,57,919	0/0:7,0:7:21.07:0,21,297	0/0:22,0:4:11.83:0,12,131	0/0:35,0:6:6.02:0,6,69	0/0:20,0:18:41.92:0,42,518	0/0:12,9:18:1.42:0,1,3	0/1:25,2:15:10.93:39,0,11	0/1:16,0:9:35.86:94,0,36	0/0:19,0:18:36.12:0,36,507	0/0:38,0:33:94.56:0,95,1287	0/0:22,0:20:45.11:0,45,589	0/0:17,0:17:48.16:0,48,687	0/0:26,0:26:66:0,66,901	0/0:19,0:18:24.60:0,25,520	0/0:19,0:18:45.04:0,45,616	0/0:21,0:20:54.16:0,54,751	0/0:24,0:22:54.13:0,54,734	0/0:18,0:18:51.11:0,51,682	0/1:17,0:9:61.17:73,0,61	0/1:14,0:11:0:0,0,0	0/1:6,0:5:0.09:0,0,0	0/0:16,0:16:36.09:0,36,477	0/0:18,0:16:45.10:0,45,591	0/0:36,0:35:69.23:0,69,978	1/1:17,4:20:2.91:46,3,0	0/0:21,0:19:51.16:0,51,707	1/1:8,0:7:9.43:94,9,0	0/0:29,0:26:53.22:0,53,967
chr10	105157489	.	GTTTC	G	335.17	PASS	AB=0.900;AC=8;AF=0.143;AN=56;BaseQRankSum=7.282;DP=583;FS=0.000;HRun=0;HaplotypeScore=120.4567;InbreedingCoeff=0.7314;MQ=54.81;MQ0=10;MQRankSum=-6.187;QD=7.62;ReadPosRankSum=-4.158;VQSLOD=1.2610;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:38:88.87:0,89,2348	0/0:8,0:8:24.08:0,24,637	0/0:26,0:6:17.77:0,18,169	0/0:33,0:12:8.69:0,9,187	0/0:22,0:22:57.67:0,58,1517	0/0:15,7:18:7.35:0,7,397	0/0:18,7:15:23.26:0,23,569	1/1:11,0:9:17.17:208,17,0	0/0:18,0:18:48.16:0,48,1216	0/0:32,0:32:93.31:0,93,2401	0/0:19,0:19:51.18:0,51,1390	0/0:18,0:18:54.19:0,54,1349	0/0:26,0:26:78.27:0,78,2043	0/0:18,0:18:48.62:0,49,1227	0/0:24,0:24:69.70:0,70,1593	0/0:22,0:21:60.07:0,60,1638	0/0:28,0:27:78.25:0,78,1905	0/0:13,0:13:36.07:0,36,852	0/1:7,0:4:19.40:47,0,19	1/1:15,0:15:6.63:49,7,0	0/1:3,0:3:0:0,0,0	0/0:16,0:16:42.09:0,42,1087	0/0:20,0:20:51.94:0,52,1498	0/0:38,0:37:89.75:0,90,2299	0/0:15,5:21:26.94:0,27,502	0/0:25,0:25:75.25:0,75,1932	1/1:5,0:7:14.30:169,14,0	0/0:25,0:25:72.25:0,72,1938
chr10	105157491	.	TTCTC	T	646.33	PASS	AB=0.938;AC=8;AF=0.143;AN=56;BaseQRankSum=8.161;DP=581;FS=3.809;HRun=0;HaplotypeScore=121.2313;InbreedingCoeff=0.7672;MQ=55.04;MQ0=7;MQRankSum=-7.228;QD=15.39;ReadPosRankSum=-5.429;VQSLOD=2.3065;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:92.90:0,93,2343	0/0:8,0:8:24.08:0,24,574	0/0:27,0:6:11.92:0,12,96	0/0:34,0:14:7.99:0,8,249	0/0:22,0:22:57.20:0,57,1477	0/0:22,0:18:17.68:0,18,460	0/0:24,0:15:28.55:0,29,741	1/1:5,5:8:15.04:266,15,0	0/0:17,0:17:48.16:0,48,1188	0/0:31,0:31:90.30:0,90,2248	0/0:19,0:19:51.18:0,51,1334	0/0:18,0:18:54.16:0,54,1233	0/0:27,0:27:81.26:0,81,2037	0/0:17,0:18:48.15:0,48,1253	0/0:24,0:24:66.20:0,66,1536	0/0:22,0:21:60.21:0,60,1537	0/0:28,0:27:56.62:0,57,1915	0/0:12,0:12:30.09:0,30,754	0/1:6,1:4:27.01:46,0,27	1/1:4,11:15:32.68:256,33,0	0/1:2,0:2:0:0,0,0	0/0:16,0:16:42.08:0,42,1060	0/0:21,0:21:47.22:0,47,1563	0/0:41,0:40:99:0,99,2374	0/0:19,0:19:26.94:0,27,600	0/0:25,0:25:75.24:0,75,1872	1/1:3,4:7:14.20:222,14,0	0/0:27,0:27:78.27:0,78,1911
chr10	105157547	.	GTCTC	G	749.55	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=7.998;DP=651;FS=8.413;HRun=0;HaplotypeScore=137.3412;InbreedingCoeff=0.9708;MQ=69.83;MQ0=8;MQRankSum=-3.203;QD=25.85;ReadPosRankSum=-4.429;VQSLOD=2.1208;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,2648	0/0:6,0:6:18.06:0,18,486	0/0:50,0:24:34.36:0,34,749	0/0:75,0:36:17.52:0,18,567	0/0:26,0:26:69.21:0,69,1655	0/0:21,0:21:42.14:0,42,1131	0/0:25,0:24:61.54:0,62,1509	1/1:0,7:7:12.02:149,12,0	0/0:20,0:20:57.20:0,57,1506	0/0:30,0:30:87.26:0,87,2036	0/0:19,0:19:57.20:0,57,1428	0/0:15,0:15:45.14:0,45,1115	0/0:26,0:26:66.20:0,66,1538	0/0:17,0:17:42.08:0,42,876	0/0:24,0:24:72.25:0,72,1939	0/0:27,0:27:72.22:0,72,1786	0/0:32,0:32:88.38:0,88,2169	0/0:18,0:18:54.15:0,54,1308	./.	1/1:3,14:17:33.03:551,33,0	./.	0/0:24,0:24:69.24:0,69,1775	0/0:22,0:22:66.21:0,66,1651	0/0:29,0:29:68.83:0,69,1850	0/0:16,0:16:39.10:0,39,1010	0/0:35,0:35:99:0,105,2643	1/1:1,4:5:11.96:184,12,0	0/0:20,0:20:51.13:0,51,1066
chr10	105157571	.	G	GTCTCTCTA	391.05	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=4.416;DP=638;FS=6.697;HRun=0;HaplotypeScore=180.6133;InbreedingCoeff=0.8755;MQ=69.27;MQ0=10;MQRankSum=-4.454;QD=11.17;ReadPosRankSum=-3.949;VQSLOD=1.2776;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:84.21:0,84,1916	0/0:6,0:6:14.95:0,15,277	0/0:33,0:22:32.63:0,33,419	0/0:64,0:31:14.17:0,14,371	0/0:27,0:27:57.20:0,57,1462	0/0:17,0:17:21.80:0,22,480	0/0:17,0:17:27.08:0,27,649	1/1:12,0:11:11.91:131,12,0	0/0:23,0:23:53.53:0,54,1226	0/0:35,0:35:99:0,99,2305	0/0:17,0:17:45.02:0,45,1103	0/0:16,0:16:42.11:0,42,957	0/0:16,0:16:38.92:0,39,923	0/0:21,0:21:48.13:0,48,1092	0/0:30,0:30:63.16:0,63,1369	0/0:23,0:23:66.23:0,66,1695	0/0:34,0:34:62.25:0,62,1434	0/0:16,0:16:45.05:0,45,903	./.	1/1:13,7:20:7.73:323,8,0	./.	0/0:28,0:28:72.18:0,72,1616	0/0:23,0:23:60.16:0,60,1271	0/0:38,0:38:84.15:0,84,1750	0/0:20,0:20:30.10:0,30,786	0/0:37,0:37:99:0,99,2404	1/1:2,1:3:3.01:57,3,0	0/0:17,0:17:47.44:0,47,984
chr10	105157607	.	GTCTCTGACTC	G	1124.15	PASS	AB=1.000;AC=11;AF=0.220;AN=50;BaseQRankSum=7.244;DP=822;FS=9.932;HRun=0;HaplotypeScore=235.1334;InbreedingCoeff=0.8538;MQ=69.24;MQ0=23;MQRankSum=-6.151;QD=14.23;ReadPosRankSum=-1.744;VQSLOD=1.1070;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:69.17:0,69,2667	1/1:2,7:9:12.04:330,12,0	0/0:117,0:54:56.34:0,56,1155	0/0:128,0:49:48.92:0,49,966	0/0:22,0:22:30.10:0,30,1157	1/1:10,5:15:11.69:253,12,0	1/1:6,8:14:9.03:273,9,0	./.	0/0:21,0:21:48.12:0,48,1958	0/0:48,0:48:93.28:0,93,3536	0/0:26,0:26:66.19:0,66,2515	0/0:20,0:20:48.16:0,48,2323	0/0:17,0:17:39.13:0,39,1671	0/0:22,0:22:60.19:0,60,2518	0/0:26,0:26:54.19:0,54,2317	0/0:21,0:21:42.11:0,42,1491	0/0:31,0:31:72.06:0,72,2897	0/0:17,0:17:45.10:0,45,1721	./.	0/1:21,0:21:0.98:106,0,1	./.	0/0:36,0:36:87.28:0,87,3748	0/0:26,0:26:63.20:0,63,2887	0/0:34,0:34:74.97:0,75,3104	1/1:3,15:18:9.03:273,9,0	0/0:38,0:38:81.27:0,81,3466	1/1:2,0:2:3.01:43,3,0	0/0:28,0:28:69.24:0,69,3335
chr10	105157623	.	GACTC	G	392.32	PASS	AB=1.000;AC=10;AF=0.185;AN=54;BaseQRankSum=7.610;DP=818;FS=6.391;HRun=0;HaplotypeScore=164.0562;InbreedingCoeff=0.4255;MQ=69.13;MQ0=16;MQRankSum=-6.971;QD=4.51;ReadPosRankSum=-0.157;VQSLOD=1.8980;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:77.84:0,78,2081	0/1:9,0:9:50.57:51,0,130	0/0:115,0:54:98.42:0,98,2213	0/0:147,0:62:99:0,130,2260	0/0:20,0:20:54.11:0,54,1270	0/1:13,0:13:12.32:12,0,196	0/1:15,0:15:46.93:47,0,169	1/1:11,1:8:11.92:90,12,0	0/0:19,0:19:54.18:0,54,1524	0/0:39,0:39:99:0,114,3027	0/0:29,0:29:87.24:0,87,2243	0/0:21,0:21:63.20:0,63,1705	0/0:23,0:23:66.20:0,66,1662	0/0:23,0:23:69.24:0,69,1948	0/0:24,0:24:69.22:0,69,1918	0/0:17,0:17:51.14:0,51,1329	0/0:33,0:33:93.30:0,93,2518	0/0:20,0:20:57.20:0,57,1595	0/0:2,0:2:1.25:0,1,3	1/1:6,12:18:22.51:234,23,0	./.	0/0:38,0:38:99:0,111,3001	0/0:31,0:31:90.27:0,90,2416	0/0:33,0:33:86.55:0,87,2404	0/1:18,0:18:50.20:50,0,178	0/0:38,0:38:99:0,114,3017	1/1:1,1:2:1.39:57,1,0	0/0:27,0:27:78.27:0,78,2219
chr10	105157633	.	GACTC	G	458.17	PASS	AB=1.000;AC=10;AF=0.192;AN=52;BaseQRankSum=8.778;DP=781;FS=4.797;HRun=0;HaplotypeScore=159.9863;InbreedingCoeff=0.4226;MQ=68.26;MQ0=15;MQRankSum=-5.926;QD=5.15;ReadPosRankSum=-1.039;VQSLOD=2.0967;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:74.33:0,74,2001	0/1:11,0:11:64.16:64,0,297	0/0:97,0:46:53.56:0,54,1742	0/0:125,1:59:75.83:0,76,1724	0/0:15,0:15:42.13:0,42,1103	0/1:14,0:14:7.69:8,0,264	0/1:15,0:15:77.91:78,0,281	./.	0/0:18,0:18:51.17:0,51,1437	0/0:38,0:38:99:0,114,3087	0/0:29,0:29:87.28:0,87,2340	0/0:21,0:21:63.22:0,63,1814	0/0:23,0:23:69.24:0,69,1942	0/0:23,0:23:69.22:0,69,1905	0/0:26,0:26:75.24:0,75,2041	0/0:17,0:17:48.16:0,48,1310	0/0:36,0:36:99:0,102,2720	0/0:21,0:21:57.20:0,57,1564	1/1:3,0:3:2.96:19,3,0	1/1:4,17:21:21.44:295,21,0	./.	0/0:37,0:37:99:0,111,3179	0/0:32,0:32:93.31:0,93,2557	0/0:33,0:33:92.92:0,93,2427	0/1:23,0:23:70.23:70,0,442	0/0:36,0:36:99:0,108,3036	1/1:2,0:2:5.75:68,6,0	0/0:28,0:28:81.28:0,81,2321
chr10	105157637	.	C	CTG	256.47	PASS	AB=1.000;AC=9;AF=0.173;AN=52;BaseQRankSum=7.895;DP=785;FS=0.000;HRun=0;HaplotypeScore=136.5517;InbreedingCoeff=0.5464;MQ=65.05;MQ0=13;MQRankSum=-5.742;QD=3.13;ReadPosRankSum=-1.344;VQSLOD=2.5488;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:75.12:0,75,1112	0/1:12,0:12:0.08:0,0,219	0/0:85,0:40:46.86:0,47,851	0/0:117,0:55:32.96:0,33,1014	0/0:16,0:16:39.12:0,39,575	0/0:18,0:18:24.04:0,24,316	0/1:16,0:16:21.91:22,0,162	./.	0/0:17,0:17:51.17:0,51,779	0/0:40,0:40:99:0,111,1617	0/0:32,0:32:93.25:0,93,1333	0/0:21,0:21:63.21:0,63,964	0/0:23,0:23:69.21:0,69,1032	0/0:23,0:23:69.21:0,69,1032	0/0:25,0:25:72.24:0,72,1085	0/0:17,0:17:51.14:0,51,726	0/0:34,0:34:96.31:0,96,1424	0/0:23,0:23:57.18:0,57,837	1/1:3,1:4:3.01:57,3,0	1/1:18,4:22:17.35:231,17,0	./.	0/0:40,0:40:99:0,114,1724	0/0:32,0:32:93.21:0,93,1401	0/0:32,0:32:84.20:0,84,1236	0/1:26,0:26:13.22:13,0,291	0/0:38,0:38:99:0,108,1611	1/1:1,1:2:5.38:66,5,0	0/0:30,0:30:84.27:0,84,1263
chr10	105157689	.	GTC	G	915.78	PASS	AB=0.700;AC=7;AF=0.125;AN=56;BaseQRankSum=9.300;DP=722;FS=14.326;HRun=0;HaplotypeScore=122.3150;InbreedingCoeff=0.8233;MQ=69.87;MQ0=7;MQRankSum=-8.086;QD=16.07;ReadPosRankSum=-1.805;VQSLOD=2.1750;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,108,1805	0/0:12,0:12:27.06:0,27,422	0/0:42,0:27:39.55:0,40,643	0/0:51,0:30:23.52:0,24,553	0/0:22,0:22:63.22:0,63,1090	0/0:22,0:22:60.20:0,60,988	0/0:20,0:20:51.10:0,51,862	1/1:5,13:12:24.03:298,24,0	0/0:24,0:24:66.23:0,66,1134	0/0:37,0:37:99:0,102,1727	0/0:22,0:22:57.20:0,57,979	0/0:25,0:25:63.18:0,63,1016	0/0:31,0:31:87.24:0,87,1407	0/0:14,0:14:42.12:0,42,692	0/0:26,0:26:75.24:0,75,1261	0/0:19,0:19:57.18:0,57,956	0/0:46,0:46:99:0,114,1965	0/0:30,0:30:67.63:0,68,1255	1/1:3,2:3:6.02:80,6,0	1/1:5,22:26:45.03:571,45,0	0/0:2,0:1:2.04:0,2,6	0/0:36,0:36:90.25:0,90,1435	0/0:25,0:25:66.21:0,66,1111	0/0:29,0:29:68.31:0,68,1257	0/0:29,0:29:75.26:0,75,1282	0/0:35,0:35:99:0,102,1756	0/1:4,3:7:2.57:108,0,3	0/0:24,0:24:54.18:0,54,917
chr10	105157748	.	GTCTT	G	2080.88	PASS	AB=0.600;AC=9;AF=0.161;AN=56;BaseQRankSum=8.691;DP=758;FS=67.203;HRun=0;HaplotypeScore=153.8568;InbreedingCoeff=0.8977;MQ=59.67;MQ0=10;MQRankSum=-9.009;QD=26.68;ReadPosRankSum=-5.537;VQSLOD=0.5334;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,117,2852	0/0:7,0:7:18.06:0,18,462	0/0:45,0:20:39.59:0,40,942	0/0:52,0:28:48.73:0,49,1013	0/0:19,0:19:57.19:0,57,1442	0/0:15,0:15:45.15:0,45,1132	0/0:31,0:30:84.01:0,84,1751	1/1:22,11:31:38.21:895,38,0	0/0:32,0:32:96.28:0,96,2378	0/0:34,0:34:99:0,102,2628	0/0:21,0:21:63.22:0,63,1603	0/0:31,0:31:93.31:0,93,2416	0/0:22,0:22:66.22:0,66,1661	0/0:21,0:21:63.22:0,63,1673	0/0:31,0:31:93.29:0,93,2274	0/0:27,0:27:75.25:0,75,1925	0/0:47,0:47:99:0,103,3111	0/0:30,0:30:61.87:0,62,1862	1/1:4,5:7:14.53:215,15,0	1/1:9,10:19:12.48:528,12,0	0/1:1,2:3:2.82:105,0,3	0/0:25,0:25:69.14:0,69,1503	0/0:29,0:29:84.28:0,84,2199	0/0:36,0:36:99:0,100,2447	0/0:27,0:27:81.26:0,81,2031	0/0:36,0:36:99:0,108,2687	1/1:4,9:13:15.17:498,15,0	0/0:17,0:17:50.39:0,50,1295
chr10	105157809	.	ATCTGTCTC	A	2347.06	PASS	AB=0.529;AC=9;AF=0.161;AN=56;BaseQRankSum=9.313;DP=840;FS=23.849;HRun=0;HaplotypeScore=246.0492;InbreedingCoeff=0.9490;MQ=82.47;MQ0=7;MQRankSum=-4.733;QD=31.72;ReadPosRankSum=-2.857;VQSLOD=1.7005;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,135,5293	0/0:7,0:7:21.07:0,21,654	0/0:84,0:59:26.98:0,27,2217	0/0:107,0:71:99:0,102,2444	0/0:27,0:27:78.27:0,78,2990	0/0:14,0:14:36.11:0,36,1263	0/0:30,0:30:66.14:0,66,2163	1/1:3,23:25:57.09:967,57,0	0/0:35,0:35:99:0,105,3981	0/0:31,0:31:90.31:0,90,3180	0/0:27,0:27:72.23:0,72,2616	0/0:29,0:29:84.29:0,84,2892	0/0:25,0:25:72.25:0,72,2823	0/0:23,0:23:66.21:0,66,2438	0/0:32,0:32:93.31:0,93,3539	0/0:33,0:33:90.31:0,90,3396	0/0:34,0:33:88.99:0,89,3004	0/0:21,0:21:60.21:0,60,2141	1/1:2,9:10:30.07:548,30,0	1/1:4,10:14:15.05:405,15,0	0/1:1,8:9:0:0,0,0	0/0:22,0:22:63.22:0,63,2155	0/0:21,0:21:54.18:0,54,1728	0/0:43,0:43:99:0,102,3595	0/0:19,0:19:32.16:0,32,1225	0/0:31,0:31:93.32:0,93,3594	1/1:2,12:14:21.07:584,21,0	0/0:19,0:19:45.07:0,45,1644
chr10	105158209	.	C	CA	5278.55	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-5.744;DP=749;FS=0.753;HRun=1;HaplotypeScore=75.2028;InbreedingCoeff=0.9983;MQ=84.94;MQ0=0;MQRankSum=-0.875;QD=40.60;ReadPosRankSum=-1.175;VQSLOD=4.8791;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1596	0/0:15,0:15:45.15:0,45,584	0/0:22,0:22:57.04:0,57,696	0/0:25,0:25:64:0,64,858	0/0:17,0:17:51.17:0,51,661	0/0:25,0:25:75.24:0,75,974	0/0:34,0:34:96.30:0,96,1228	1/1:1,21:22:60.20:897,60,0	0/0:39,0:39:99:0,114,1464	0/0:27,0:27:78.20:0,78,970	0/0:16,0:16:45.15:0,45,584	0/0:37,0:37:99:0,105,1360	0/0:32,0:32:90.26:0,90,1138	0/0:28,0:28:84.26:0,84,1077	0/0:34,0:34:99:0,102,1322	0/0:42,0:42:99:0,123,1568	0/0:35,0:35:99:0,105,1316	0/0:32,0:32:93.30:0,93,1207	1/1:2,9:11:24.06:336,24,0	1/1:1,21:22:57.19:854,57,0	1/1:2,42:44:99:1844,123,0	0/0:24,0:24:72.23:0,72,935	0/0:9,0:9:27.09:0,27,350	0/0:36,0:36:99:0,108,1383	0/0:25,0:25:72.23:0,72,935	0/0:16,0:16:48.16:0,48,623	1/1:0,31:31:90.30:1348,90,0	0/0:7,0:7:21.07:0,21,273
chr10	105159153	.	ATG	A	4478.35	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.342;DP=849;FS=2.850;HRun=0;HaplotypeScore=109.3385;InbreedingCoeff=0.9968;MQ=57.90;MQ0=13;MQRankSum=-2.068;QD=27.82;ReadPosRankSum=-0.558;VQSLOD=5.7698;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,1:40:49.34:0,49,1312	0/0:23,0:23:62.92:0,63,1047	0/0:29,0:8:21.07:0,21,345	0/0:40,1:23:33.78:0,34,522	0/0:24,0:24:63.22:0,63,1042	0/0:23,0:23:56.91:0,57,947	0/0:19,0:19:45.15:0,45,744	1/1:8,27:32:72.22:895,72,0	0/0:15,0:15:34.85:0,35,642	0/0:53,1:54:97.34:0,97,2099	0/0:29,1:30:40.40:0,40,1198	0/0:31,0:31:86.63:0,87,1407	0/0:19,0:19:54.18:0,54,897	0/0:20,1:21:22.33:0,22,881	0/0:30,0:30:84.24:0,84,1358	0/0:21,0:21:54.18:0,54,898	0/0:44,0:44:92.11:0,92,1513	0/0:29,0:29:78.06:0,78,1149	1/1:7,21:28:66.04:808,66,0	1/1:2,22:24:60.19:757,60,0	1/1:4,44:47:99:1292,105,0	0/0:31,1:32:46.21:0,46,1253	0/0:22,0:22:19.36:0,19,860	0/0:27,0:27:72.25:0,72,1180	0/0:33,0:33:80.64:0,81,1299	0/0:36,1:37:58.46:0,58,1503	1/1:2,22:24:59.40:726,59,0	0/0:44,0:44:93.32:0,93,1546
chr10	105159712	.	A	AGACACAAAT	13692.50	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-7.061;DP=712;FS=27.864;HRun=0;HaplotypeScore=186.3096;InbreedingCoeff=0.9981;MQ=86.66;MQ0=0;MQRankSum=-15.449;QD=67.45;ReadPosRankSum=-4.819;VQSLOD=2.5540;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,135,3648	0/0:7,0:7:21.07:0,21,603	0/0:29,0:29:60.20:0,60,1596	0/0:28,0:28:63.64:0,64,1474	0/0:19,0:19:51.16:0,51,1407	1/1:4,16:21:48.16:2156,48,0	1/1:16,12:30:42.14:1686,42,0	1/1:29,8:38:51.16:1891,51,0	0/0:31,0:31:81.28:0,81,2226	0/0:23,0:23:60.20:0,60,1668	0/0:11,0:11:24.08:0,24,656	0/0:29,0:29:66.20:0,66,1703	0/0:33,0:33:81.25:0,81,2157	0/0:23,0:23:57.20:0,57,1604	0/0:25,0:25:72.25:0,72,2058	0/0:38,0:38:84.29:0,84,2404	0/0:35,0:35:84.27:0,84,2355	0/0:30,0:30:69.21:0,69,1837	1/1:16,9:25:54.18:2091,54,0	1/1:7,14:22:48.16:1888,48,0	1/1:14,9:24:30.57:945,31,0	0/0:16,0:16:33.11:0,33,935	0/0:22,0:22:60.21:0,60,1588	0/0:28,0:28:72.25:0,72,2004	1/1:3,13:16:36.12:1425,36,0	0/0:25,0:25:60.21:0,60,1721	1/1:15,11:27:42.14:1610,42,0	0/0:7,0:7:21.07:0,21,605
chr10	105160160	.	G	GA	3574.93	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-2.871;DP=571;FS=1.843;HRun=7;HaplotypeScore=55.6397;InbreedingCoeff=0.9941;MQ=77.36;MQ0=0;MQRankSum=-1.037;QD=30.04;ReadPosRankSum=-2.224;VQSLOD=3.3294;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.10:0,60,579	0/0:9,0:9:21.03:0,21,203	0/0:13,0:13:18.02:0,18,169	0/0:14,0:14:26.72:0,27,222	0/0:29,0:29:81.13:0,81,782	0/0:35,0:35:99:0,99,956	0/0:10,0:10:27.04:0,27,261	1/1:5,28:33:84.26:1012,84,0	0/0:20,0:20:45.07:0,45,435	0/0:26,0:26:69.09:0,69,661	0/0:16,0:16:42.05:0,42,400	0/0:23,0:23:66.09:0,66,632	0/0:18,0:18:48.08:0,48,464	0/0:18,0:18:54.09:0,54,521	0/0:11,0:11:24.04:0,24,232	0/0:19,0:19:51.07:0,51,487	0/0:25,0:25:63.10:0,63,608	0/0:21,0:21:54.04:0,54,513	1/1:4,23:27:72.17:843,72,0	1/1:4,21:25:57.14:673,57,0	1/1:0,8:8:18.06:218,18,0	0/0:12,0:12:30.04:0,30,289	0/0:28,0:28:81.13:0,81,782	0/0:19,0:19:48.07:0,48,464	0/0:11,0:11:30.05:0,30,290	0/0:34,0:34:93.14:0,93,898	1/1:2,24:26:69.21:830,69,0	0/0:20,0:20:60.10:0,60,579
chr10	105160406	.	C	CGGA	4616.72	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-6.805;DP=607;FS=38.836;HRun=0;HaplotypeScore=91.0037;InbreedingCoeff=0.9920;MQ=84.10;MQ0=0;MQRankSum=-9.043;QD=44.39;ReadPosRankSum=-3.217;VQSLOD=3.1759;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,141,2208	0/0:7,0:7:12.03:0,12,155	0/0:18,0:18:40.33:0,40,571	0/0:22,0:22:59.12:0,59,719	0/0:21,0:21:54.10:0,54,764	0/0:17,0:17:45.12:0,45,686	0/0:23,0:23:66.19:0,66,1006	1/1:2,14:19:51.03:885,51,0	0/0:35,0:35:99:0,102,1665	0/0:18,0:18:48.15:0,48,750	0/0:19,0:19:45:0,45,664	0/0:22,0:22:63.14:0,63,898	0/0:22,0:22:54.17:0,54,857	0/0:18,0:18:54.18:0,54,882	0/0:22,0:21:63.12:0,63,911	0/0:20,0:20:57.17:0,57,877	0/0:39,0:38:99:0,108,1638	0/0:20,0:20:54.18:0,54,882	1/1:3,13:17:51.07:894,51,0	1/1:2,19:22:42.14:904,42,0	1/1:6,18:25:33.11:736,33,0	0/0:12,0:12:27.08:0,27,417	0/0:22,0:22:57.18:0,57,888	0/0:26,0:26:78.27:0,78,1268	0/0:18,0:18:48.15:0,48,760	0/0:22,0:22:51.15:0,51,767	1/1:1,19:21:54.19:1198,54,0	0/0:8,0:8:24.08:0,24,392
chr10	105160959	.	T	TG	2099.60	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=2.303;DP=528;FS=5.438;HRun=8;HaplotypeScore=65.0063;InbreedingCoeff=0.9448;MQ=81.87;MQ0=1;MQRankSum=-2.506;QD=21.87;ReadPosRankSum=0.722;VQSLOD=4.0147;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.03:0,54,494	1/1:3,14:17:36.11:415,36,0	0/0:18,0:18:36.74:0,37,298	0/0:28,0:28:59.45:0,59,483	0/0:23,0:23:63.02:0,63,576	0/0:24,0:25:62.07:0,62,555	0/0:19,0:19:48.02:0,48,439	1/1:5,5:10:15.02:161,15,0	0/0:10,0:10:24.01:0,24,219	0/0:32,0:32:63.02:0,63,576	0/0:18,0:18:36.01:0,36,329	0/0:24,0:24:63.03:0,63,576	0/0:16,0:16:45.02:0,45,412	0/0:20,0:20:51.01:0,51,466	0/0:25,0:25:69.02:0,69,627	0/0:10,0:10:27:0,27,243	0/0:13,0:13:33.01:0,33,302	0/0:14,0:14:38.98:0,39,346	1/1:4,9:13:2.63:284,3,0	1/1:4,14:18:33.10:380,33,0	1/1:1,14:15:33.10:381,33,0	0/0:31,0:31:81.03:0,81,740	0/0:32,0:32:75.01:0,75,686	0/0:5,0:5:9:0,9,82	0/0:18,0:18:51.01:0,51,461	0/0:22,0:22:54.01:0,54,491	1/1:2,21:21:57.17:658,57,0	0/0:8,0:8:21.01:0,21,192
chr10	105161223	.	CA	C	5570.90	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=16.357;DP=686;FS=2.475;HRun=1;HaplotypeScore=86.8997;InbreedingCoeff=0.9998;MQ=76.28;MQ0=0;MQRankSum=-2.209;QD=38.16;ReadPosRankSum=-1.584;VQSLOD=4.7026;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,2267	0/0:10,0:10:30.09:0,30,452	0/0:26,0:26:77.24:0,77,1126	0/0:19,0:19:57.15:0,57,861	0/0:13,0:13:36.12:0,36,574	0/0:17,0:17:51.16:0,51,777	0/0:31,0:31:93.29:0,93,1416	1/1:0,26:25:75.18:973,75,0	0/0:23,0:23:69.24:0,69,1102	0/0:31,0:31:87.28:0,87,1348	0/0:21,0:21:63.21:0,63,1006	0/0:24,0:24:72.22:0,72,1124	0/0:21,0:21:63.20:0,63,981	0/0:24,0:24:72.20:0,72,1078	0/0:20,0:20:60.19:0,60,934	0/0:17,0:17:51.16:0,51,789	0/0:46,0:46:99:0,138,2040	0/0:25,0:25:72.20:0,72,1100	1/1:0,28:28:81.22:1077,81,0	1/1:0,20:20:57.19:796,57,0	1/1:0,54:54:99:2011,144,0	0/0:12,0:12:36.12:0,36,564	0/0:27,0:27:81.26:0,81,1255	0/0:23,0:23:69.24:0,69,1092	0/0:18,0:17:54.17:0,54,837	0/0:25,0:25:75.26:0,75,1197	1/1:0,18:18:51.17:712,51,0	0/0:17,0:17:51.13:0,51,764
chr10	105161809	.	CT	C	5358.60	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=-3.051;DP=351;FS=0.000;HRun=2;HaplotypeScore=238.6071;InbreedingCoeff=0.7294;MQ=35.98;MQ0=18;MQRankSum=0.538;QD=16.69;ReadPosRankSum=4.386;VQSLOD=4.5356;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:10.57:90,11,0	1/1:4,0:4:8.38:67,8,0	0/0:16,0:3:3.01:0,3,44	0/0:12,0:2:6.02:0,6,75	1/1:18,1:20:29.41:291,29,0	1/1:10,0:10:14.83:171,15,0	1/1:18,0:17:44.87:398,45,0	1/1:17,0:14:30.58:214,31,0	1/1:10,0:10:21.26:177,21,0	1/1:17,0:17:27.49:291,27,0	1/1:14,0:14:22.43:189,22,0	1/1:18,0:18:47.69:416,48,0	1/1:16,0:16:40.46:318,40,0	1/1:11,0:11:26.15:225,26,0	1/1:9,0:9:20.05:128,20,0	1/1:8,0:8:20.33:164,20,0	1/1:11,5:16:16.59:196,17,0	1/1:6,0:6:15:135,15,0	1/1:17,0:14:32.34:256,32,0	1/1:12,0:12:12.99:141,13,0	1/1:18,0:18:23.03:199,23,0	1/1:10,0:10:25.85:234,26,0	1/1:15,0:15:16.65:164,17,0	1/1:16,0:16:26.68:196,27,0	1/1:14,1:15:35.36:308,35,0	1/1:10,0:9:14.31:170,14,0	1/1:10,0:10:23.53:220,24,0	./.
chr10	105161810	.	TTGAAAAAC	T	10670.94	PASS	AB=0.976;AC=48;AF=0.889;AN=54;BaseQRankSum=-4.608;DP=336;FS=0.000;HRun=0;HaplotypeScore=258.0771;InbreedingCoeff=0.4363;MQ=32.50;MQ0=18;MQRankSum=1.801;QD=34.53;ReadPosRankSum=5.225;VQSLOD=3.8236;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:9.03:150,9,0	1/1:4,0:4:9.03:143,9,0	0/0:15,0:2:2.99:0,3,52	0/0:12,0:2:6.02:0,6,153	0/1:19,1:20:3:611,0,3	1/1:10,0:10:5.96:328,6,0	1/1:17,0:16:45.15:748,45,0	1/1:16,0:13:39.08:554,39,0	1/1:10,0:10:21.07:356,21,0	1/1:17,0:17:26.40:506,26,0	1/1:14,0:14:17.03:429,17,0	1/1:17,0:18:50.01:714,50,0	1/1:16,0:16:42.13:663,42,0	1/1:11,0:11:27.09:460,27,0	1/1:9,0:9:21.07:365,21,0	1/1:8,0:8:20.13:256,20,0	1/1:15,0:15:19.39:379,19,0	1/1:6,0:6:14.96:222,15,0	1/1:15,0:12:35.14:580,35,0	1/1:8,4:12:1.31:284,1,0	1/1:14,0:14:8.22:410,8,0	1/1:10,0:10:14.72:428,15,0	1/1:8,7:15:9.59:368,10,0	0/1:16,0:16:0.80:334,0,1	1/1:13,0:13:36.59:643,37,0	1/1:10,0:9:22.40:301,22,0	1/1:9,0:9:27.08:440,27,0	./.
chr10	105161814	.	A	AAAG	13768.71	PASS	AC=50;AF=0.962;AN=52;BaseQRankSum=-5.141;DP=379;FS=0.000;HRun=0;HaplotypeScore=329.0642;InbreedingCoeff=0.5759;MQ=29.19;MQ0=30;MQRankSum=-0.146;QD=39.23;ReadPosRankSum=4.516;VQSLOD=4.2509;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,4:5:14.08:241,14,0	1/1:0,3:3:9.03:199,9,0	./.	0/0:12,0:2:5.98:0,6,66	1/1:7,17:24:7.74:679,8,0	1/1:3,9:11:25.48:454,25,0	1/1:13,11:23:28.44:898,28,0	1/1:8,9:14:27.66:650,28,0	1/1:3,9:12:33.26:526,33,0	1/1:8,15:23:12.52:850,13,0	1/1:4,10:14:26.80:484,27,0	1/1:6,11:17:45.93:902,46,0	1/1:1,14:15:44.88:870,45,0	1/1:4,8:12:32.32:514,32,0	1/1:5,9:14:36.72:587,37,0	1/1:2,8:9:27.04:521,27,0	1/1:6,9:15:29.41:599,29,0	1/1:1,5:6:15.05:335,15,0	1/1:5,12:13:31.14:569,31,0	1/1:4,8:12:23.99:400,24,0	1/1:6,8:13:26.50:411,27,0	1/1:6,10:16:15.72:571,16,0	1/1:8,8:16:19.69:426,20,0	1/1:4,13:16:18.81:529,19,0	1/1:5,9:14:8.90:587,9,0	1/1:3,9:11:3.47:452,3,0	1/1:0,8:8:24.08:516,24,0	./.
chr10	105161819	.	CAA	C	5914.59	PASS	AB=0.586;AC=45;AF=0.900;AN=50;BaseQRankSum=-5.503;DP=362;FS=0.000;HRun=5;HaplotypeScore=321.4205;InbreedingCoeff=-0.1148;MQ=28.74;MQ0=35;MQRankSum=0.674;QD=17.82;ReadPosRankSum=1.604;VQSLOD=0.7062;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,5:5:14.32:135,14,0	1/1:1,2:3:6.01:79,6,0	./.	./.	0/1:6,18:24:0.12:320,0,0	1/1:1,11:11:11.55:238,12,0	1/1:8,13:20:4.43:443,4,0	1/1:9,8:14:0.85:247,1,0	1/1:1,10:11:24.54:228,25,0	1/1:6,17:23:18.41:351,18,0	0/1:5,7:13:3.79:110,0,4	1/1:2,12:13:28.53:398,29,0	1/1:4,10:14:16.59:292,17,0	1/1:3,9:11:21.62:212,22,0	1/1:5,10:14:14.34:155,14,0	1/1:4,7:10:14.74:216,15,0	0/1:2,12:14:0.18:206,0,0	1/1:0,5:5:15.05:198,15,0	1/1:3,10:10:23.61:259,24,0	0/1:5,7:12:3.07:131,0,3	1/1:2,9:10:0.70:213,1,0	1/1:2,14:16:26.39:325,26,0	1/1:9,7:16:1.64:170,2,0	1/1:4,12:14:22.72:221,23,0	1/1:4,9:13:18.46:286,18,0	0/1:3,9:11:3.58:215,0,4	1/1:1,7:8:21.02:267,21,0	./.
chr10	105161821	.	A	AG	1894.47	PASS	AB=0.969;AC=47;AF=0.940;AN=50;BaseQRankSum=-0.956;DP=360;FS=0.000;HRun=0;HaplotypeScore=338.5427;InbreedingCoeff=-0.0855;MQ=28.27;MQ0=39;MQRankSum=-0.255;QD=5.74;ReadPosRankSum=4.720;VQSLOD=2.6336;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:5:6.40:32,6,0	1/1:3,0:3:5.16:20,5,0	./.	./.	1/1:19,2:23:31.12:168,31,0	1/1:12,0:11:13.31:71,13,0	1/1:17,6:22:47.29:226,47,0	0/1:17,1:14:3.63:45,0,4	1/1:11,0:11:15.51:71,16,0	0/1:22,1:23:36.95:49,0,37	1/1:11,1:12:6.50:62,7,0	1/1:15,0:14:30.15:126,30,0	0/1:13,0:13:6.12:72,0,6	1/1:11,1:11:15.86:88,16,0	1/1:14,0:13:15.51:96,16,0	1/1:10,1:10:14.61:74,15,0	1/1:14,0:14:13.37:67,13,0	1/1:5,0:5:9.53:30,10,0	1/1:13,0:10:3.58:19,4,0	1/1:12,0:12:12.38:61,12,0	1/1:10,0:9:12.59:59,13,0	1/1:15,1:16:24.52:142,25,0	1/1:14,1:15:18.63:77,19,0	1/1:16,0:14:19.06:77,19,0	1/1:11,2:13:25.76:136,26,0	1/1:11,1:11:1.21:48,1,0	1/1:8,0:8:18.27:76,18,0	./.
chr10	105161825	.	GGA	G	1443.71	PASS	AB=0.971;AC=40;AF=0.800;AN=50;BaseQRankSum=-2.983;DP=330;FS=0.000;HRun=0;HaplotypeScore=320.7026;InbreedingCoeff=-0.2111;MQ=26.48;MQ0=47;MQRankSum=0.520;QD=4.94;ReadPosRankSum=1.861;VQSLOD=2.0266;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:5:12.69:55,13,0	0/1:3,0:3:4.31:18,0,4	./.	./.	1/1:20,3:23:3.35:79,3,0	1/1:12,0:11:5.67:72,6,0	1/1:17,6:22:33.44:191,33,0	1/1:13,1:10:5.89:58,6,0	1/1:10,0:10:20.66:89,21,0	1/1:18,1:19:17.69:94,18,0	0/1:8,1:10:2.36:50,0,2	1/1:15,0:14:20.98:128,21,0	0/1:10,0:10:0.34:43,0,0	1/1:10,1:10:13.75:75,14,0	1/1:11,0:10:6.33:47,6,0	1/1:9,1:9:15.69:80,16,0	0/1:12,0:12:16.61:25,0,17	1/1:5,0:5:2.55:21,3,0	0/1:13,0:11:12.45:12,0,13	0/1:7,0:7:9.60:28,0,10	0/1:10,0:9:3.52:43,0,4	1/1:15,1:16:24.66:139,25,0	0/1:7,1:8:2.08:38,0,2	0/1:14,0:12:2.48:26,0,2	1/1:10,2:12:9.66:75,10,0	0/1:10,1:10:13.51:23,0,14	1/1:7,0:7:6.99:49,7,0	./.
chr10	105161828	.	AG	A	4446.42	PASS	AB=0.600;AC=49;AF=0.980;AN=50;BaseQRankSum=-3.849;DP=342;FS=0.000;HRun=2;HaplotypeScore=319.1865;InbreedingCoeff=-0.0412;MQ=26.03;MQ0=59;MQRankSum=1.435;QD=14.87;ReadPosRankSum=0.852;VQSLOD=3.7154;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,5:5:11.05:108,11,0	0/1:1,2:3:2.47:63,0,2	./.	./.	1/1:7,16:23:24.11:207,24,0	1/1:2,10:11:15.75:193,16,0	1/1:13,10:22:30.13:292,30,0	1/1:10,6:11:17.01:193,17,0	1/1:1,9:10:16.83:166,17,0	1/1:3,16:19:21.88:308,22,0	1/1:2,8:10:5.40:119,5,0	1/1:3,12:14:35.38:370,35,0	1/1:3,7:10:17.28:188,17,0	1/1:3,8:10:16.86:166,17,0	1/1:3,8:10:5.65:41,6,0	1/1:3,7:9:20.70:192,21,0	1/1:1,11:12:10.99:158,11,0	1/1:1,5:5:12.50:135,12,0	1/1:10,5:11:7.82:76,8,0	1/1:0,7:7:4.76:114,5,0	1/1:2,8:9:17.28:197,17,0	1/1:3,13:16:25.40:278,25,0	1/1:2,6:8:12.68:156,13,0	1/1:5,10:12:19.94:156,20,0	1/1:5,7:12:24.71:226,25,0	1/1:4,8:10:11.24:168,11,0	1/1:2,5:7:14.97:176,15,0	./.
chr10	105161832	.	AG	A	4701.47	PASS	AC=50;AF=1.000;AN=50;BaseQRankSum=-4.572;DP=318;FS=0.000;HRun=2;HaplotypeScore=293.9028;InbreedingCoeff=-0.0221;MQ=25.27;MQ0=70;MQRankSum=0.122;QD=17.48;ReadPosRankSum=-1.093;VQSLOD=3.6107;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:5:13.45:117,13,0	1/1:3,0:3:6.02:68,6,0	./.	./.	1/1:19,0:19:22.24:219,22,0	1/1:11,0:10:15.18:171,15,0	1/1:18,1:17:41.41:365,41,0	1/1:15,2:9:24.26:235,24,0	1/1:9,0:9:16.77:147,17,0	1/1:17,1:18:29.88:345,30,0	1/1:10,0:10:23.10:189,23,0	1/1:16,0:15:37.81:383,38,0	1/1:8,0:7:15.51:167,16,0	1/1:10,0:9:18.54:174,19,0	1/1:9,0:8:15.26:72,15,0	1/1:9,1:9:23.74:213,24,0	1/1:11,0:11:13.10:156,13,0	1/1:6,0:5:14.86:140,15,0	1/1:10,0:7:6.88:72,7,0	1/1:7,0:7:4.68:107,5,0	1/1:9,0:8:17.24:189,17,0	1/1:15,0:15:38.05:318,38,0	1/1:7,0:7:11.37:157,11,0	1/1:13,0:10:16.27:127,16,0	1/1:9,1:10:20.10:233,20,0	1/1:11,0:9:13.15:175,13,0	1/1:5,0:5:15.04:165,15,0	./.
chr10	105161834	.	GA	G	2171.89	PASS	AB=1.000;AC=49;AF=0.980;AN=50;BaseQRankSum=-6.027;DP=324;FS=0.000;HRun=3;HaplotypeScore=305.8714;InbreedingCoeff=-0.0397;MQ=25.08;MQ0=76;MQRankSum=2.349;QD=7.98;ReadPosRankSum=-3.114;VQSLOD=-0.5183;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:5:12.64:53,13,0	1/1:3,0:3:8.54:45,9,0	./.	./.	1/1:16,3:19:18.32:136,18,0	1/1:11,0:10:14.12:73,14,0	1/1:13,6:17:43.01:272,43,0	1/1:15,2:9:22.39:113,22,0	1/1:9,0:9:16.65:71,17,0	1/1:17,1:18:27.19:166,27,0	1/1:9,1:10:19.61:109,20,0	1/1:15,1:15:28.03:158,28,0	1/1:8,0:7:14.01:68,14,0	1/1:9,1:9:17.05:103,17,0	1/1:9,0:8:16.69:67,17,0	1/1:9,1:9:16.17:90,16,0	0/1:12,0:12:1.45:41,0,1	1/1:6,0:5:9.67:43,10,0	1/1:9,2:7:6.54:30,7,0	1/1:7,0:7:0.79:27,1,0	1/1:9,0:8:15.16:70,15,0	1/1:14,1:15:32.86:168,33,0	1/1:6,1:7:10.07:57,10,0	1/1:14,0:10:6.12:25,6,0	1/1:8,2:10:17.27:126,17,0	1/1:10,1:9:12.35:77,12,0	1/1:5,0:5:13.82:62,14,0	./.
chr10	105161845	.	A	AC	629.74	PASS	AB=0.929;AC=43;AF=0.896;AN=48;BaseQRankSum=-0.863;DP=217;FS=0.000;HRun=0;HaplotypeScore=203.0497;InbreedingCoeff=0.2754;MQ=21.64;MQ0=94;MQRankSum=0.264;QD=4.60;ReadPosRankSum=-0.855;VQSLOD=2.5299;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,2:2:0.06:1,0,0	./.	./.	./.	1/1:0,6:9:7.27:40,7,0	1/1:1,5:5:1.45:12,1,0	1/1:4,3:10:2.21:31,2,0	0/1:11,0:4:0.68:4,0,1	1/1:0,5:5:3.49:19,3,0	0/0:1,8:10:8.92:0,9,27	1/1:0,5:6:7.51:31,8,0	1/1:2,3:6:13.05:81,13,0	1/1:1,2:2:2.50:9,2,0	1/1:1,4:5:5.71:25,6,0	1/1:1,7:7:16.69:64,17,0	1/1:2,3:5:1.75:51,2,0	1/1:1,6:7:2.64:41,3,0	1/1:2,1:1:3.01:33,3,0	0/0:6,2:5:4.04:0,4,11	1/1:0,4:4:2.53:34,3,0	1/1:1,2:2:4.87:18,5,0	1/1:0,6:8:8.21:36,8,0	1/1:0,2:3:5.60:18,6,0	1/1:5,6:6:12.06:92,12,0	1/1:0,2:4:8.24:36,8,0	1/1:3,4:5:5.83:49,6,0	1/1:0,0:1:2.37:8,2,0	./.
chr10	105161850	.	A	AAAC	958.92	PASS	AB=0.620;AC=35;AF=0.729;AN=48;BaseQRankSum=1.581;DP=225;FS=0.000;HRun=0;HaplotypeScore=203.4827;InbreedingCoeff=0.0369;MQ=21.15;MQ0=104;MQRankSum=-1.816;QD=7.21;ReadPosRankSum=0.073;VQSLOD=2.7398;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,2:2:5.87:42,6,0	./.	./.	./.	0/1:3,6:9:20.10:31,0,20	1/1:2,5:5:4.34:28,4,0	1/1:10,3:10:9.42:150,9,0	0/0:14,0:4:2.12:0,2,8	1/1:0,5:5:0.31:33,0,0	0/1:2,8:10:12.37:12,0,41	1/1:2,4:6:6.80:30,7,0	0/1:5,3:6:1.32:114,0,1	1/1:1,2:2:1.55:5,2,0	1/1:2,4:5:5.51:32,6,0	0/1:1,7:7:2.21:14,0,2	1/1:3,3:5:9.87:135,10,0	1/1:1,6:7:5.48:83,5,0	1/1:2,1:1:3.01:53,3,0	0/0:4,2:5:5.45:0,5,15	1/1:0,4:4:8.36:69,8,0	0/0:2,2:2:0.91:0,1,2	0/1:2,6:8:4.52:42,0,5	1/1:0,2:2:4.50:16,4,0	0/1:6,5:6:1.56:89,0,2	1/1:2,2:4:6.24:32,6,0	0/1:4,4:5:4.15:60,0,4	1/1:1,0:1:2.22:7,2,0	./.
chr10	105161856	.	AAGG	A	856.45	PASS	AB=0.905;AC=26;AF=0.542;AN=48;BaseQRankSum=-4.783;DP=225;FS=0.000;HRun=0;HaplotypeScore=203.0443;InbreedingCoeff=0.1049;MQ=20.97;MQ0=106;MQRankSum=0.541;QD=6.80;ReadPosRankSum=-1.220;VQSLOD=2.7666;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:2:1.38:11,1,0	./.	./.	./.	0/1:6,3:9:22.24:80,0,22	0/1:7,0:5:1.77:2,0,10	1/1:8,5:10:5.57:229,6,0	1/1:13,3:4:12.04:181,12,0	0/1:5,0:5:1.97:12,0,2	0/1:8,1:9:18.62:29,0,19	0/1:4,2:6:5.75:29,0,6	0/1:7,1:6:0.13:52,0,0	0/0:3,0:2:2.60:0,3,10	0/1:6,1:5:6.01:29,0,6	1/1:8,0:7:1.93:14,2,0	1/1:5,1:5:9.84:70,10,0	0/0:6,1:7:12.72:0,13,43	0/1:3,0:1:0:0,0,0	0/0:9,0:5:3.09:0,3,8	0/1:4,0:4:4.70:11,0,5	0/0:5,0:2:5.19:0,5,19	1/1:6,2:8:10.45:97,10,0	0/0:2,0:2:1.87:0,2,10	0/0:10,0:5:4.51:0,5,17	1/1:2,2:4:6.90:65,7,0	0/1:7,1:5:17.82:37,0,18	1/1:0,1:1:3.01:44,3,0	./.
chr10	105161861	.	GA	G	374.37	PASS	AB=0.949;AC=29;AF=0.604;AN=48;BaseQRankSum=-3.971;DP=227;FS=0.000;HRun=2;HaplotypeScore=202.5364;InbreedingCoeff=0.2165;MQ=20.88;MQ0=108;MQRankSum=0.431;QD=2.97;ReadPosRankSum=0.335;VQSLOD=-0.2201;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:2:1.16:4,1,0	./.	./.	./.	1/1:9,0:9:2.87:55,3,0	0/0:7,0:5:0.87:0,1,4	1/1:12,1:10:11.62:123,12,0	1/1:15,1:4:1.67:35,2,0	1/1:5,0:5:1.83:4,2,0	0/1:9,0:9:3.01:9,0,3	1/1:6,0:6:4.24:36,4,0	0/1:7,1:6:9.05:12,0,9	0/1:3,0:2:0:0,0,0	1/1:7,0:5:1.25:30,1,0	1/1:8,0:7:1.83:5,2,0	0/1:5,1:5:7.76:29,0,8	0/0:8,0:7:5.73:0,6,21	0/0:3,0:1:2.04:0,2,6	1/1:10,0:5:0.86:2,1,0	0/0:4,0:4:4.32:0,4,16	0/0:5,0:2:0:0,0,0	1/1:8,0:8:3.16:57,3,0	0/0:2,0:2:2.04:0,2,6	0/0:11,0:5:4.08:0,4,13	1/1:4,0:4:6.02:67,6,0	0/1:9,0:5:3.47:19,0,3	1/1:1,0:1:1.82:5,2,0	./.
chr10	105161866	.	A	AAG	1271.47	PASS	AB=0.631;AC=38;AF=0.864;AN=44;BaseQRankSum=1.403;DP=196;FS=0.000;HRun=0;HaplotypeScore=184.3321;InbreedingCoeff=0.1516;MQ=19.98;MQ0=103;MQRankSum=0.601;QD=9.28;ReadPosRankSum=0.534;VQSLOD=2.9602;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,2:2:6.01:59,6,0	./.	./.	./.	1/1:2,4:6:3.61:26,4,0	1/1:2,5:5:13.99:73,14,0	1/1:4,3:4:6.42:56,6,0	1/1:12,0:1:0.47:1,0,0	1/1:0,5:5:13.83:93,14,0	0/1:1,7:8:6.40:6,0,16	1/1:3,2:5:8.22:59,8,0	1/1:3,3:4:12.01:170,12,0	1/1:1,2:2:4.91:21,5,0	1/1:2,4:4:11.55:77,12,0	1/1:1,7:7:19.88:125,20,0	1/1:2,3:4:11.05:145,11,0	0/1:2,6:7:4.98:103,0,5	./.	0/1:6,2:3:0.15:0,0,5	1/1:1,3:4:11:88,11,0	0/1:3,2:2:1.08:5,0,1	1/1:1,5:6:13.60:90,14,0	1/1:0,2:2:4.74:23,5,0	1/1:7,5:5:7.84:104,8,0	0/1:0,2:2:0:0,0,0	0/1:4,4:4:13.36:48,0,13	./.	./.
chr10	105161867	.	AAAG	A	160.39	PASS	AB=0.918;AC=19;AF=0.452;AN=42;BaseQRankSum=-1.584;DP=192;FS=0.000;HRun=0;HaplotypeScore=190.4892;InbreedingCoeff=0.0601;MQ=19.74;MQ0=103;MQRankSum=-0.976;QD=1.91;ReadPosRankSum=1.162;VQSLOD=2.1765;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:2:1.36:11,1,0	./.	./.	./.	0/1:4,2:6:3.06:3,0,26	0/1:7,0:5:2.02:2,0,7	0/0:6,0:3:0.80:0,1,10	./.	0/1:5,0:5:1.97:12,0,2	0/0:7,1:8:3.40:0,3,23	0/1:3,2:5:1.56:2,0,3	0/1:5,0:3:2.44:47,0,2	0/0:3,0:2:2.60:0,3,10	0/0:6,0:4:0.34:0,0,9	1/1:8,0:7:1.93:14,2,0	1/1:4,0:3:6.93:51,7,0	0/1:8,0:7:21.74:22,0,29	./.	0/0:7,1:3:0.39:0,0,3	0/1:3,1:4:0.14:55,0,0	0/0:5,0:2:4.59:0,5,15	1/1:5,1:6:4.72:36,5,0	0/0:2,0:2:0.51:0,1,1	0/1:12,0:5:2.04:2,0,8	1/1:2,0:2:0.89:2,1,0	0/1:8,0:4:8.88:9,0,21	./.	./.
chr10	105161872	.	A	AAG	874.77	PASS	AB=0.601;AC=30;AF=0.714;AN=42;BaseQRankSum=-0.543;DP=183;FS=0.000;HRun=0;HaplotypeScore=188.6109;InbreedingCoeff=0.3668;MQ=20.22;MQ0=94;MQRankSum=0.437;QD=8.84;ReadPosRankSum=3.136;VQSLOD=2.9455;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,2:2:6.01:59,6,0	./.	./.	./.	1/1:2,4:6:3.04:24,3,0	1/1:3,4:5:7.83:58,8,0	1/1:3,3:3:4.95:28,5,0	./.	1/1:0,5:5:13.83:93,14,0	0/1:1,7:8:0.03:0,0,20	1/1:2,3:5:4.74:54,5,0	1/1:4,1:3:2.95:22,3,0	1/1:1,2:2:4.91:21,5,0	1/1:2,4:4:11.55:77,12,0	1/1:1,7:7:19.88:125,20,0	1/1:2,2:3:5.97:81,6,0	0/1:2,6:7:5.18:97,0,5	./.	0/0:6,2:3:4.07:0,4,11	0/1:3,1:4:6.76:8,0,7	0/0:3,2:2:4.07:0,4,12	1/1:1,5:6:10.87:92,11,0	0/0:2,0:2:0.20:0,0,3	1/1:9,3:5:13.94:155,14,0	0/1:0,2:2:0:0,0,0	0/0:5,3:4:6.65:0,7,23	./.	./.
chr10	105162607	.	A	AGG	698.66	PASS	AB=0.773;AC=15;AF=0.268;AN=56;BaseQRankSum=2.017;DP=418;FS=0.658;HRun=11;HaplotypeScore=87.4497;InbreedingCoeff=0.5964;MQ=79.64;MQ0=0;MQRankSum=-1.450;QD=5.06;ReadPosRankSum=-2.168;VQSLOD=-0.6056;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:32.92:0,33,305	0/0:3,0:8:8.22:0,8,36	0/0:18,0:18:23.70:0,24,216	0/0:19,0:19:23.69:0,24,192	0/0:7,0:7:5.99:0,6,58	1/1:9,0:16:0.65:5,1,0	0/1:8,1:20:32.13:43,0,32	1/1:12,4:16:17.38:201,17,0	0/0:6,0:6:12.02:0,12,116	0/0:15,0:15:23.97:0,24,232	0/0:2,0:2:6.01:0,6,58	0/0:13,0:13:26.98:0,27,244	0/0:15,0:15:23.93:0,24,224	0/0:11,0:11:17.95:0,18,174	1/1:5,1:8:2.50:9,2,0	0/0:21,0:21:47.99:0,48,459	0/0:26,0:29:50.40:0,50,460	0/0:18,0:19:32.61:0,33,301	1/1:7,0:17:29.41:267,29,0	0/1:5,0:5:0:0,0,0	0/1:15,0:26:6.82:7,0,32	0/0:6,0:6:9:0,9,86	0/0:5,0:5:8.99:0,9,87	0/0:38,0:41:38.73:0,39,473	1/1:6,0:6:2.50:9,2,0	0/0:13,0:13:8.66:0,9,69	1/1:13,8:23:26.53:317,27,0	0/0:7,0:7:12.01:0,12,116
chr10	105162847	.	AC	A	1741.99	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.760;DP=429;FS=4.637;HRun=8;HaplotypeScore=49.4809;InbreedingCoeff=0.9682;MQ=73.56;MQ0=1;MQRankSum=-2.431;QD=18.73;ReadPosRankSum=1.201;VQSLOD=3.3287;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:72.17:0,72,832	1/1:1,13:14:36.06:347,36,0	0/0:16,0:16:47.12:0,47,489	0/0:18,0:14:8.65:0,9,293	0/0:15,0:15:39.11:0,39,459	0/0:0,0:15:34.50:0,35,175	0/0:2,0:12:23:0,23,117	1/1:4,14:18:27.03:260,27,0	0/0:15,0:15:33.10:0,33,398	0/0:16,0:16:45.14:0,45,542	0/0:13,0:13:33.10:0,33,396	0/0:8,0:8:24.06:0,24,277	0/0:4,0:4:12.04:0,12,145	0/0:5,0:5:15.05:0,15,181	0/0:10,0:10:21.06:0,21,253	0/0:16,0:16:45.13:0,45,533	0/0:39,0:39:99:0,108,1292	0/0:19,0:19:51.16:0,51,613	1/1:4,7:11:21:192,21,0	1/1:2,6:8:12.01:115,12,0	1/1:2,12:14:27.04:261,27,0	0/0:10,0:10:27.07:0,27,313	0/0:12,0:12:33.09:0,33,387	0/0:18,0:18:41.91:0,42,439	0/0:4,0:16:28.57:0,29,144	0/0:16,0:16:39.10:0,39,449	1/1:2,26:28:78.12:753,78,0	0/0:14,0:14:36.08:0,36,420
chr10	105168147	.	A	AGTGTGT	1311.47	PASS	AC=16;AF=0.308;AN=52;BaseQRankSum=0.443;DP=691;FS=3.994;HRun=0;HaplotypeScore=156.2565;InbreedingCoeff=0.7442;MQ=68.57;MQ0=8;MQRankSum=-3.707;QD=8.30;ReadPosRankSum=-2.911;VQSLOD=2.0736;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:38.49:0,38,621	1/1:2,3:10:2.93:97,3,0	./.	./.	0/0:30,0:31:41.87:0,42,748	1/1:12,11:28:5.13:134,5,0	1/1:12,1:22:3.01:38,3,0	1/1:28,0:28:21.07:451,21,0	0/0:25,0:27:42.01:0,42,721	0/0:32,0:34:27.07:0,27,439	0/0:27,0:27:20.65:0,21,375	0/0:21,0:25:21.06:0,21,367	0/0:22,0:25:8.12:0,8,468	0/0:15,0:16:15.05:0,15,284	0/0:15,0:17:24.07:0,24,417	0/0:18,0:19:21.06:0,21,387	0/0:27,0:29:39.03:0,39,658	0/0:15,0:16:21.02:0,21,327	1/1:19,0:21:12.02:229,12,0	1/1:10,4:20:3.01:97,3,0	0/0:14,0:22:0:0,0,0	0/0:21,0:23:21.06:0,21,386	0/0:28,0:29:0.06:0,0,592	0/0:35,0:38:34.73:0,35,584	1/1:10,5:18:12.04:258,12,0	0/0:24,0:26:18.10:0,18,543	1/1:9,0:10:8.99:176,9,0	0/0:18,0:20:2.58:0,3,387
chr10	105168278	.	ATGG	A	1333.17	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.724;DP=815;FS=0.615;HRun=0;HaplotypeScore=111.6175;InbreedingCoeff=0.8635;MQ=52.00;MQ0=60;MQRankSum=0.174;QD=17.54;ReadPosRankSum=-0.438;VQSLOD=3.0847;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:42:75.03:0,75,1334	0/0:3,0:10:3.59:0,4,35	0/0:57,0:8:6.02:0,6,95	0/0:52,0:13:12.02:0,12,186	0/0:19,0:19:6:0,6,85	1/1:15,11:25:51.07:639,51,0	1/1:4,22:26:27.09:375,27,0	0/0:20,0:14:14.98:0,15,158	0/0:30,0:30:66.20:0,66,1299	0/0:28,0:26:36.11:0,36,651	0/0:18,0:18:30.03:0,30,538	0/0:36,0:36:78.13:0,78,1334	0/0:26,0:26:60.17:0,60,1085	0/0:18,0:18:48.13:0,48,889	0/0:27,0:27:63.21:0,63,1237	0/0:25,0:25:66.16:0,66,1164	0/0:37,0:37:90.21:0,90,1591	0/0:29,0:29:72.14:0,72,1233	0/0:20,0:22:20.72:0,21,201	0/0:19,0:19:21.04:0,21,246	0/0:26,0:30:54.12:0,54,662	0/0:34,0:34:54.18:0,54,1045	0/0:21,0:19:30.06:0,30,498	0/0:46,0:46:99:0,106,1855	1/1:10,14:23:36.05:461,36,0	0/0:44,0:41:51.16:0,51,989	0/0:17,0:20:41.87:0,42,465	0/0:18,0:17:29.97:0,30,409
chr10	105169639	.	TA	T	1219.06	PASS	AB=0.791;AC=12;AF=0.214;AN=56;BaseQRankSum=5.428;DP=471;FS=0.000;HRun=13;HaplotypeScore=55.8356;InbreedingCoeff=0.7637;MQ=75.18;MQ0=0;MQRankSum=-0.851;QD=10.51;ReadPosRankSum=0.862;VQSLOD=2.8766;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,2:35:51.10:0,51,737	1/1:3,11:14:32.69:234,33,0	0/0:19,0:17:20.44:0,20,181	0/1:18,1:17:10.81:11,0,36	0/0:11,0:12:26.75:0,27,234	0/0:19,0:21:17.55:0,18,334	0/0:13,0:13:36.01:0,36,332	1/1:10,17:27:54.09:392,54,0	0/0:15,0:15:39.01:0,39,365	0/0:17,0:17:33.05:0,33,321	0/0:14,1:18:25.42:0,25,353	0/0:12,1:13:8.93:0,9,212	0/0:10,1:11:4.90:0,5,182	0/0:9,1:10:8.10:0,8,224	0/0:17,0:17:41.88:0,42,383	0/0:18,1:20:38.42:0,38,469	0/0:26,2:28:28.41:0,28,589	0/0:21,2:23:38.22:0,38,527	0/1:5,7:12:2.35:147,0,2	1/1:3,12:15:7.07:174,7,0	1/1:0,6:6:17.90:131,18,0	0/0:7,0:7:14.89:0,15,132	0/0:7,0:7:18.01:0,18,165	0/0:17,0:17:48.07:0,48,462	0/0:0,0:13:19.89:0,20,99	0/0:27,0:28:51.99:0,52,507	1/1:6,17:23:41.20:306,41,0	0/0:11,0:11:33.04:0,33,316
chr10	105170513	.	AAC	A	142.03	PASS	AB=0.945;AC=16;AF=0.308;AN=52;BaseQRankSum=4.362;DP=623;FS=6.528;HRun=0;HaplotypeScore=88.9564;InbreedingCoeff=-0.2916;MQ=68.01;MQ0=17;MQRankSum=-0.021;QD=0.44;ReadPosRankSum=1.501;VQSLOD=1.0327;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:38:2.16:2,0,425	1/1:6,0:5:3.01:32,3,0	./.	./.	0/1:11,0:11:4.03:4,0,141	0/1:19,0:19:3.52:4,0,22	0/1:30,0:30:19.75:29,0,20	0/0:26,0:24:13.88:0,14,75	0/1:27,2:29:7.91:8,0,552	0/1:22,1:21:3.74:4,0,286	0/1:17,0:17:38.27:38,0,243	0/1:8,5:13:20.69:21,0,92	0/0:14,0:14:25.38:0,25,252	0/0:15,0:15:17.98:0,18,200	0/0:18,0:18:32.77:0,33,402	0/1:15,2:17:11.80:12,0,227	0/1:28,3:31:65.92:66,0,607	0/1:14,1:15:19.40:19,0,124	0/0:22,0:22:13.10:0,13,138	0/0:13,0:13:5.97:0,6,66	0/0:44,0:42:8.97:0,9,70	0/0:16,0:16:20.80:0,21,248	0/0:17,1:18:2.45:0,2,145	0/1:30,3:33:11.51:12,0,554	0/0:13,0:13:2.75:0,3,13	0/1:17,1:18:17.82:18,0,134	0/0:11,0:12:5.98:0,6,60	0/1:22,0:24:12.62:13,0,181
chr10	105170553	.	CACAT	C	1719.72	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=-2.952;DP=678;FS=3.309;HRun=0;HaplotypeScore=116.6479;InbreedingCoeff=0.6996;MQ=55.84;MQ0=10;MQRankSum=-0.885;QD=16.86;ReadPosRankSum=-5.198;VQSLOD=2.5491;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,100,1295	0/0:11,0:10:23.46:0,23,168	0/0:11,0:7:2.17:0,2,115	0/0:21,0:11:22.27:0,22,170	0/1:10,0:10:2.75:3,0,264	1/1:22,1:22:41.02:502,41,0	1/1:30,4:34:87.92:886,88,0	0/0:40,0:38:82.75:0,83,762	0/0:30,0:30:80.97:0,81,1416	0/0:25,0:25:29.75:0,30,746	0/0:17,0:17:38.96:0,39,583	0/0:16,0:16:32.73:0,33,368	0/0:22,0:22:59.78:0,60,750	0/0:20,0:20:54.03:0,54,781	0/0:32,0:32:92.88:0,93,1295	0/0:18,0:17:42:0,42,672	0/0:41,0:40:99:0,108,1699	0/0:19,0:18:50.92:0,51,644	0/0:23,0:22:62.23:0,62,641	0/0:18,0:18:17.32:0,17,331	0/0:63,0:59:41.81:0,42,698	0/0:15,0:15:23.91:0,24,408	0/1:16,0:16:25.12:25,0,184	0/0:38,0:37:95.76:0,96,1593	1/1:19,0:19:51.35:453,51,0	0/0:14,0:14:36.04:0,36,481	0/0:19,0:18:20.20:0,20,329	0/0:17,0:16:23.91:0,24,399
chr10	105171767	.	AACAC	A	3382.57	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.922;DP=1028;FS=12.819;HRun=0;HaplotypeScore=204.7038;InbreedingCoeff=1.0000;MQ=64.07;MQ0=8;MQRankSum=0.232;QD=31.03;ReadPosRankSum=1.994;VQSLOD=2.7956;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:48:99:0,126,2965	0/0:14,0:15:44.94:0,45,1069	0/0:53,0:33:51.91:0,52,1176	0/0:50,0:34:58.62:0,59,1096	0/0:20,0:19:57.18:0,57,1389	1/1:6,26:32:66.22:1140,66,0	1/1:8,37:46:81.27:1361,81,0	0/0:36,0:36:75.25:0,75,1777	0/0:49,0:49:99:0,141,3422	0/0:50,0:51:99:0,138,3242	0/0:22,0:22:60.21:0,60,1496	0/0:42,0:43:99:0,114,2763	0/0:34,0:35:90.10:0,90,2190	0/0:41,0:41:99:0,117,2842	0/0:51,0:52:99:0,138,3360	0/0:30,0:30:78.27:0,78,1930	0/0:34,0:33:78.21:0,78,1803	0/0:21,0:24:63.08:0,63,1320	0/0:22,0:21:48.15:0,48,1118	0/0:35,0:35:42.10:0,42,896	0/0:50,0:51:77.46:0,77,1744	0/0:32,0:33:93.09:0,93,2220	0/0:15,0:15:42.14:0,42,1052	0/0:59,0:59:99:0,163,4053	1/1:6,25:31:51.17:881,51,0	0/0:42,0:44:99:0,122,2919	0/0:21,0:21:48.16:0,48,1206	0/0:35,0:35:99:0,102,2501
chr10	105171801	.	TCA	T	599.05	PASS	AB=1.000;AC=4;AF=0.074;AN=54;BaseQRankSum=7.424;DP=1028;FS=2.346;HRun=0;HaplotypeScore=187.1370;InbreedingCoeff=0.4109;MQ=62.39;MQ0=3;MQRankSum=-1.062;QD=9.08;ReadPosRankSum=-1.692;VQSLOD=3.1615;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,117,1978	1/1:3,17:20:51.17:674,51,0	0/0:42,0:32:44.80:0,45,920	0/0:52,0:41:89.84:0,90,1403	0/0:26,0:26:78.24:0,78,1268	0/0:33,0:33:75.87:0,76,1393	0/0:46,0:46:99:0,100,1598	./.	0/0:62,0:62:99:0,174,2987	0/0:53,0:53:99:0,144,2414	0/0:21,0:21:57.17:0,57,934	0/0:50,0:50:99:0,141,2341	0/0:39,0:39:99:0,111,1790	0/0:41,0:41:99:0,114,1838	0/0:64,0:64:99:0,187,3085	0/0:31,0:31:87.28:0,87,1454	0/0:32,0:32:67.95:0,68,1345	0/0:33,0:33:68.35:0,68,1433	0/0:18,0:18:2.91:0,3,9	0/0:29,0:29:2.74:0,3,12	0/1:26,0:30:11.34:11,0,44	0/0:31,0:31:81.26:0,81,1372	0/0:22,0:22:56.07:0,56,928	0/0:66,0:66:99:0,181,3097	0/0:30,0:30:69.23:0,69,1168	0/0:47,0:47:99:0,129,2094	0/1:13,0:16:25.86:26,0,161	0/0:35,0:35:89.77:0,90,1451
chr10	105171819	.	A	AACACACAC	4050.03	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.654;DP=1095;FS=3.109;HRun=0;HaplotypeScore=316.5448;InbreedingCoeff=0.9900;MQ=63.63;MQ0=1;MQRankSum=-7.618;QD=32.14;ReadPosRankSum=-6.374;VQSLOD=1.3398;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,117,2915	0/0:16,0:16:45.14:0,45,1164	0/0:39,0:35:70.48:0,70,1250	0/0:65,0:54:26.29:0,26,2266	0/0:30,0:30:87.30:0,87,2239	0/0:37,0:37:87.26:0,87,2151	0/0:45,0:45:90.26:0,90,2237	1/1:6,0:6:18.06:513,18,0	0/0:59,0:59:99:0,166,4162	0/0:60,0:60:99:0,160,4030	0/0:26,0:26:75.26:0,75,1879	0/0:51,0:51:99:0,132,3217	0/0:38,0:38:99:0,111,2891	0/0:38,0:38:99:0,111,2825	0/0:67,0:67:99:0,190,4800	0/0:39,0:39:96.30:0,96,2400	0/0:44,0:44:86.89:0,87,2835	0/0:33,0:33:89.64:0,90,2239	1/1:21,0:21:45.07:733,45,0	1/1:32,0:33:12.04:358,12,0	1/1:16,25:47:30.11:791,30,0	0/0:33,0:33:93.29:0,93,2265	0/0:30,0:30:81.25:0,81,1974	0/0:72,0:72:99:0,187,4812	0/0:31,0:31:72.22:0,72,1796	0/0:46,0:46:99:0,129,3323	1/1:7,12:19:24.16:1656,24,0	0/0:27,0:27:64.46:0,64,1884
chr10	105174633	.	TACACAC	T	752.08	PASS	AB=0.967;AC=18;AF=0.346;AN=52;BaseQRankSum=6.966;DP=482;FS=3.879;HRun=0;HaplotypeScore=100.7478;InbreedingCoeff=0.6259;MQ=61.00;MQ0=5;MQRankSum=-4.565;QD=4.67;ReadPosRankSum=0.923;VQSLOD=1.5874;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:39:45.13:0,45,1116	1/1:5,6:12:12.04:225,12,0	./.	./.	0/0:14,0:14:15.05:0,15,418	1/1:15,4:21:6.91:105,7,0	1/1:12,6:19:9.03:164,9,0	0/0:10,0:10:0.47:0,0,1	0/0:19,0:23:24.08:0,24,637	0/0:23,0:23:26.96:0,27,713	0/0:12,0:11:3.01:0,3,97	0/0:13,0:15:27.09:0,27,744	0/1:13,1:14:39.88:40,0,494	0/0:10,0:11:21.07:0,21,594	0/0:16,0:16:30.10:0,30,954	0/0:15,0:15:18.02:0,18,384	0/0:22,0:23:29.10:0,29,883	0/0:15,0:15:21.54:0,22,592	0/1:9,0:9:11.78:12,0,55	1/1:3,0:6:6.02:84,6,0	1/1:35,0:40:3.01:42,3,0	0/0:10,0:12:9.02:0,9,134	1/1:10,0:17:1.43:3,1,0	0/0:34,0:36:60.20:0,60,1639	1/1:5,6:10:6.02:122,6,0	0/0:14,0:17:23.18:0,23,528	1/1:7,0:12:8.77:124,9,0	0/0:6,0:6:15.05:0,15,337
chr10	105179963	.	GGT	G	1237.10	PASS	AB=0.923;AC=26;AF=0.500;AN=52;BaseQRankSum=6.129;DP=681;FS=10.520;HRun=0;HaplotypeScore=94.8250;InbreedingCoeff=0.0464;MQ=60.75;MQ0=16;MQRankSum=1.496;QD=2.60;ReadPosRankSum=0.216;VQSLOD=1.2934;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:52,2:56:50.52:51,0,404	1/1:6,6:12:17.84:198,18,0	./.	./.	0/1:18,1:19:18:18,0,165	1/1:15,6:24:14.70:127,15,0	1/1:17,6:23:15.04:165,15,0	1/1:18,0:16:6:58,6,0	0/1:29,1:30:2.99:3,0,318	0/0:19,0:19:3.01:0,3,45	0/0:16,0:15:8.90:0,9,104	0/0:20,0:20:18.02:0,18,227	0/1:17,2:18:24.02:24,0,81	0/1:10,1:11:21.02:21,0,117	0/1:25,2:26:14.14:14,0,299	0/0:14,0:14:6.02:0,6,90	0/1:33,5:38:2.99:3,0,333	0/0:25,0:25:5.75:0,6,423	0/1:19,0:20:25.60:26,0,31	1/1:12,5:19:14.54:108,15,0	1/1:36,2:38:23.01:216,23,0	0/0:21,0:21:12.04:0,12,178	0/1:12,1:13:21.02:21,0,123	0/1:27,0:27:41.68:42,0,225	1/1:15,5:19:15.04:165,15,0	0/1:29,0:28:7.71:8,0,231	0/1:19,8:29:24.34:139,0,24	0/0:15,0:15:21.07:0,21,282
chr10	105183027	.	G	GCACA	2545.61	PASS	AB=0.820;AC=14;AF=0.250;AN=56;BaseQRankSum=-1.435;DP=753;FS=12.993;HRun=0;HaplotypeScore=150.4880;InbreedingCoeff=0.7114;MQ=59.21;MQ0=7;MQRankSum=-2.673;QD=10.56;ReadPosRankSum=-4.444;VQSLOD=1.2222;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:44:77.57:0,78,1308	1/1:5,0:5:3.01:72,3,0	1/1:30,0:22:3.01:56,3,0	0/1:34,0:16:0:0,0,0	0/0:17,0:18:29.54:0,30,541	0/0:6,0:16:25.82:0,26,220	0/0:17,0:32:34.80:0,35,426	1/1:24,5:37:46.68:513,47,0	0/0:26,0:26:38.93:0,39,541	0/0:30,0:32:30.07:0,30,584	0/0:11,0:12:12.04:0,12,193	0/0:33,0:38:62.60:0,63,816	0/0:21,0:27:36.08:0,36,802	0/0:35,0:35:64.35:0,64,941	0/0:26,0:28:47.59:0,48,803	0/0:8,0:9:15.04:0,15,221	0/0:31,0:33:49.67:0,50,1023	0/0:18,0:18:24.64:0,25,608	1/1:16,17:36:65.77:964,66,0	1/1:4,7:11:3.01:72,3,0	0/1:31,28:70:79.37:660,0,79	0/0:18,0:19:35.96:0,36,549	0/0:12,0:11:18.48:0,18,237	0/0:44,0:45:85.49:0,85,1396	0/0:15,0:30:0.46:0,0,236	0/0:24,0:24:27.14:0,27,597	1/1:5,8:15:17.80:373,18,0	0/0:14,0:14:17.04:0,17,243
chr10	105183079	.	G	GCACA	2183.28	PASS	AB=0.643;AC=5;AF=0.089;AN=56;BaseQRankSum=0.824;DP=835;FS=2.632;HRun=0;HaplotypeScore=175.2961;InbreedingCoeff=0.7470;MQ=62.19;MQ0=4;MQRankSum=-1.423;QD=25.39;ReadPosRankSum=-1.149;VQSLOD=3.5008;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,123,1968	0/0:11,0:11:30.10:0,30,509	0/0:50,0:33:49.94:0,50,704	0/0:32,0:19:36.05:0,36,518	0/0:23,0:24:57.19:0,57,940	1/1:7,13:24:41.63:859,42,0	0/1:16,13:36:7.42:637,0,7	0/0:26,0:27:57.19:0,57,937	0/0:20,0:21:60.18:0,60,964	0/0:22,0:22:48.09:0,48,755	0/0:13,0:13:2:0,2,381	0/0:30,0:30:72.17:0,72,1167	0/0:34,0:34:84.29:0,84,1416	0/0:32,0:34:81.25:0,81,1298	0/0:30,0:31:78.25:0,78,1271	0/0:19,0:19:45.15:0,45,753	0/0:32,0:33:15.49:0,15,1061	0/0:19,0:21:26.22:0,26,642	0/0:31,0:31:66.13:0,66,979	0/0:11,0:12:24.07:0,24,384	0/0:96,0:100:99:0,196,3114	0/0:25,0:26:59.20:0,59,925	0/0:14,0:14:29.92:0,30,474	0/0:52,0:52:97.33:0,97,1813	1/1:10,12:26:47.56:817,48,0	0/0:30,0:30:78.27:0,78,1322	0/0:20,0:20:45.05:0,45,750	0/0:10,0:10:30.09:0,30,483
chr10	105185595	.	T	TGG	2991.95	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-2.668;DP=538;FS=5.429;HRun=7;HaplotypeScore=81.9967;InbreedingCoeff=0.9773;MQ=81.32;MQ0=2;MQRankSum=-2.299;QD=18.47;ReadPosRankSum=-0.862;VQSLOD=1.4043;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.14:0,69,769	1/1:2,8:10:18.01:265,18,0	0/0:36,0:30:57.21:0,57,772	0/0:41,0:31:70.85:0,71,741	0/0:11,0:11:23.92:0,24,257	1/1:5,0:15:17.94:71,18,0	1/1:1,0:26:52.40:184,52,0	1/1:4,14:19:30.08:443,30,0	0/0:17,0:18:41.77:0,42,418	0/0:21,0:21:45.11:0,45,517	0/0:8,0:8:12:0,12,119	0/0:12,0:12:24.06:0,24,279	0/0:22,0:22:56.97:0,57,601	0/0:11,0:11:27:0,27,314	0/0:20,0:20:47.99:0,48,498	0/0:12,0:12:34.65:0,35,388	0/0:31,0:31:62.85:0,63,698	0/0:24,0:24:50.99:0,51,524	1/1:6,9:15:27.04:385,27,0	1/1:2,4:6:9.03:148,9,0	1/1:9,36:47:71.94:1154,72,0	0/0:9,0:9:24.06:0,24,280	0/0:10,0:10:20.86:0,21,244	0/0:34,0:34:96.16:0,96,1073	1/1:3,0:10:17.47:62,17,0	0/0:22,0:22:45.12:0,45,516	1/1:3,11:14:30.10:491,30,0	0/0:6,0:6:15.02:0,15,163
chr10	105185613	.	C	CGTGT	1058.86	PASS	AB=0.840;AC=8;AF=0.182;AN=44;BaseQRankSum=-4.094;DP=567;FS=13.532;HRun=0;HaplotypeScore=113.0012;InbreedingCoeff=0.2833;MQ=62.17;MQ0=18;MQRankSum=-1.172;QD=6.83;ReadPosRankSum=-0.860;VQSLOD=1.7269;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:45,0:44:8.99:117,9,0	./.	./.	./.	0/0:14,0:14:6.02:0,6,91	0/0:20,0:21:2.64:0,3,12	0/1:27,0:28:0.34:305,0,0	./.	0/0:20,0:21:21.06:0,21,298	0/0:16,0:16:6.01:0,6,75	0/0:6,0:6:3:0,3,28	0/0:11,0:11:3.01:0,3,46	0/0:18,0:21:15.01:0,15,138	0/0:16,0:15:5.71:0,6,62	0/0:17,0:19:12.02:0,12,147	0/0:17,0:17:5.90:0,6,74	0/1:24,13:41:89.57:393,0,90	0/1:12,8:23:75.92:194,0,76	./.	0/1:6,0:6:0:0,0,0	0/0:38,0:38:2.85:0,3,23	./.	0/0:11,0:11:1.55:0,2,4	0/0:31,0:34:27.06:0,27,340	1/1:12,0:12:9.03:168,9,0	0/0:19,0:19:5.13:0,5,54	0/0:10,0:11:6.01:0,6,56	0/0:10,0:10:9.02:0,9,119
chr10	105186668	.	TGCGCGC	T	480.23	PASS	AB=1.000;AC=8;AF=0.148;AN=54;BaseQRankSum=3.549;DP=386;FS=2.191;HRun=0;HaplotypeScore=82.6917;InbreedingCoeff=0.5593;MQ=70.89;MQ0=2;MQRankSum=-1.560;QD=5.86;ReadPosRankSum=-0.590;VQSLOD=1.8289;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:60.11:0,60,1256	./.	0/0:4,0:3:2.37:0,2,8	0/0:11,0:11:5.98:0,6,49	0/0:20,0:20:36.11:0,36,701	1/1:3,0:12:11.68:117,12,0	1/1:6,16:24:8.92:123,9,0	0/0:18,0:18:12.35:0,12,97	0/0:6,0:6:12.04:0,12,348	0/0:12,0:12:24.08:0,24,520	0/0:9,0:9:21.07:0,21,575	0/0:8,0:8:12.04:0,12,266	0/0:10,0:10:15.05:0,15,375	0/0:6,0:6:9.03:0,9,223	0/0:12,0:12:12.03:0,12,277	0/0:8,0:8:18.05:0,18,356	0/0:29,0:29:75.18:0,75,1731	0/0:20,0:19:36.12:0,36,1026	0/1:13,0:13:9.50:10,0,104	0/1:20,0:20:8.28:8,0,82	0/0:21,0:21:8.46:0,8,53	0/0:15,0:15:18.05:0,18,489	0/0:9,0:9:21:0,21,416	0/0:15,0:15:36.07:0,36,918	1/1:12,0:12:20.54:362,21,0	0/0:13,0:13:24.03:0,24,481	0/0:9,0:8:2.88:0,3,15	0/0:16,0:18:36.12:0,36,852
chr10	105186687	.	GCA	G	87.27	PASS	AB=0.913;AC=14;AF=0.280;AN=50;BaseQRankSum=4.298;DP=376;FS=2.029;HRun=0;HaplotypeScore=59.6851;InbreedingCoeff=0.1319;MQ=57.64;MQ0=9;MQRankSum=-0.354;QD=0.58;ReadPosRankSum=3.190;VQSLOD=1.4760;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:26.74:0,27,252	0/1:2,0:5:0.02:0,0,0	./.	./.	0/0:19,0:19:14.92:0,15,136	0/1:19,0:16:1.52:2,0,103	0/0:29,0:28:7.40:0,7,117	./.	0/0:12,0:12:23.92:0,24,208	0/1:13,2:14:12.52:13,0,149	0/1:10,0:10:7.75:8,0,121	0/0:4,0:4:6:0,6,65	0/0:7,0:7:3.01:0,3,46	0/1:6,2:7:27.01:27,0,39	0/0:4,0:4:6.02:0,6,90	0/0:6,0:5:3:0,3,25	0/0:30,0:31:0.19:0,0,384	0/0:20,0:19:14.97:0,15,223	0/1:13,0:13:15.99:49,0,16	1/1:21,0:21:10.47:68,10,0	1/1:19,0:19:2.99:23,3,0	0/0:12,0:12:15.02:0,15,182	0/0:11,0:11:9.01:0,9,114	0/0:15,0:14:21.02:0,21,252	0/1:13,0:13:1.47:1,0,87	0/0:12,0:10:20.92:0,21,212	1/1:13,0:12:2.99:23,3,0	0/1:14,0:13:4.98:5,0,127
chr10	105188346	.	T	TACAC	952.29	PASS	AB=0.980;AC=20;AF=0.385;AN=52;BaseQRankSum=3.100;DP=659;FS=0.000;HRun=0;HaplotypeScore=122.0448;InbreedingCoeff=0.7226;MQ=62.19;MQ0=16;MQRankSum=-2.339;QD=4.16;ReadPosRankSum=-1.573;VQSLOD=2.1756;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:39.74:0,40,541	1/1:12,0:10:3.01:49,3,0	1/1:37,0:18:1.25:3,1,0	./.	0/0:22,0:22:27.36:0,27,353	1/1:8,8:19:11.75:226,12,0	1/1:18,9:31:11.71:172,12,0	1/1:21,0:21:11.94:119,12,0	0/0:11,0:11:7.42:0,7,146	0/0:22,0:24:38.38:0,38,462	0/0:20,0:22:13.86:0,14,264	0/0:26,0:26:28.96:0,29,358	0/0:15,0:15:19.42:0,19,284	0/0:19,0:19:20.82:0,21,265	0/0:15,0:15:18.10:0,18,208	0/0:30,0:30:24.21:0,24,714	0/0:29,0:39:42.40:0,42,571	0/1:20,0:24:37.39:37,0,318	1/1:15,0:14:15.33:146,15,0	1/1:20,0:18:6.01:67,6,0	./.	0/0:22,0:22:20.29:0,20,323	0/0:22,0:22:21.78:0,22,354	0/0:26,0:29:47.49:0,47,730	1/1:8,6:14:11.71:225,12,0	0/1:15,0:17:4.51:5,0,234	1/1:18,0:17:7.44:86,7,0	0/0:28,0:29:39.52:0,40,498
chr10	105190354	.	CT	C	683.57	PASS	AB=0.889;AC=9;AF=0.161;AN=56;BaseQRankSum=6.947;DP=583;FS=17.289;HRun=11;HaplotypeScore=60.6022;InbreedingCoeff=0.6198;MQ=69.82;MQ0=0;MQRankSum=-1.588;QD=5.43;ReadPosRankSum=2.580;VQSLOD=0.4613;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1074	0/0:7,0:7:18.04:0,18,186	0/0:6,0:6:11.62:0,12,102	0/0:11,0:12:9.34:0,9,112	0/0:25,0:25:63.15:0,63,665	1/1:1,14:15:35.96:296,36,0	1/1:1,22:23:44.93:369,45,0	0/1:19,3:22:9.92:10,0,300	0/0:20,0:20:57.09:0,57,588	0/0:28,0:28:72.18:0,72,767	0/0:21,1:22:35.45:0,35,547	0/1:17,2:19:7.18:7,0,341	0/0:21,2:23:32.49:0,32,544	0/0:24,0:25:62.95:0,63,631	0/0:20,1:20:35.49:0,35,575	0/0:19,1:21:32.30:0,32,521	0/1:31,5:37:5.49:5,0,746	0/0:24,1:25:35.51:0,36,582	0/0:21,1:22:16.86:0,17,406	0/0:15,0:16:26.22:0,26,307	0/0:22,0:23:44.88:0,45,426	0/0:19,0:19:48.09:0,48,486	0/0:15,2:17:23.41:0,23,429	0/0:28,0:28:72.16:0,72,758	1/1:2,8:10:17.97:148,18,0	0/0:26,0:26:60.09:0,60,609	0/0:28,3:30:34.85:0,35,747	0/0:4,0:4:12.02:0,12,120
chr10	105193876	.	AAC	A	147.80	PASS	AB=0.868;AC=8;AF=0.160;AN=50;BaseQRankSum=2.824;DP=521;FS=4.177;HRun=0;HaplotypeScore=96.3224;InbreedingCoeff=-0.0788;MQ=62.08;MQ0=7;MQRankSum=0.412;QD=0.85;ReadPosRankSum=0.034;VQSLOD=1.7372;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:33,3:37:48.71:49,0,565	1/1:6,1:8:2.84:14,3,0	./.	./.	0/0:8,0:8:6.02:0,6,91	0/0:8,0:10:3:0,3,26	0/0:19,0:25:38.51:0,39,366	0/0:14,0:12:14.97:0,15,157	0/0:18,0:18:15.05:0,15,227	0/0:22,0:21:23.97:0,24,287	0/0:9,0:10:3:0,3,26	0/1:9,3:12:45.69:46,0,204	0/0:15,0:15:12.04:0,12,177	0/1:10,4:14:21.34:21,0,122	0/0:15,0:15:24.06:0,24,339	0/0:10,0:10:3.01:0,3,45	0/1:32,2:35:41.22:41,0,785	0/0:22,1:24:3.64:0,4,607	0/0:10,0:13:9:0,9,94	0/0:9,0:10:9:0,9,80	0/0:39,0:37:20.50:0,21,199	0/0:15,0:15:15.01:0,15,177	0/0:7,0:9:12.03:0,12,161	0/1:41,5:48:41.58:42,0,770	0/0:12,0:12:18.02:0,18,184	0/1:18,1:20:59.60:60,0,160	0/0:5,0:9:6.47:0,6,53	./.
chr10	105193979	.	G	GAC	660.26	PASS	AB=0.571;AC=5;AF=0.089;AN=56;BaseQRankSum=-2.799;DP=726;FS=7.633;HRun=0;HaplotypeScore=104.1771;InbreedingCoeff=0.6230;MQ=53.86;MQ0=23;MQRankSum=-0.380;QD=8.15;ReadPosRankSum=1.263;VQSLOD=2.8453;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:99:0,102,1271	0/0:3,0:3:9.03:0,9,115	0/0:4,0:1:2.96:0,3,19	0/0:10,0:3:3.01:0,3,32	0/0:19,0:19:46.13:0,46,605	0/1:4,12:16:17.10:280,0,17	1/1:16,31:44:8.99:151,9,0	0/0:27,0:13:33.10:0,33,414	0/0:29,0:28:66.11:0,66,805	0/0:18,0:18:28.32:0,28,404	0/0:11,0:10:30.05:0,30,363	0/0:32,0:31:78.25:0,78,988	0/0:18,0:18:50.94:0,51,605	0/0:24,0:24:66.16:0,66,807	0/0:13,0:13:30.10:0,30,380	0/0:15,0:15:38.34:0,38,462	0/0:37,0:38:93.61:0,94,1177	0/0:32,0:32:87.11:0,87,1076	0/0:24,0:22:37.47:0,37,497	0/0:6,0:6:14.98:0,15,170	0/0:132,0:125:99:0,259,3268	0/0:14,0:13:33.10:0,33,415	0/0:13,0:10:18.06:0,18,229	0/0:69,0:69:99:0,156,2154	1/1:4,12:15:21.07:351,21,0	0/0:25,0:23:57.14:0,57,680	0/0:12,0:11:23.80:0,24,288	0/0:6,0:6:18.06:0,18,227
chr10	105194067	.	ACG	A	173.16	PASS	AB=0.920;AC=7;AF=0.125;AN=56;BaseQRankSum=7.918;DP=637;FS=0.628;HRun=0;HaplotypeScore=114.0003;InbreedingCoeff=0.6917;MQ=51.15;MQ0=26;MQRankSum=-0.832;QD=2.34;ReadPosRankSum=0.099;VQSLOD=2.3907;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:26.88:0,27,602	0/0:5,0:4:11.74:0,12,107	0/0:19,0:4:5.16:0,5,62	0/1:21,0:12:0.61:1,0,92	0/0:16,0:14:32.95:0,33,457	1/1:14,1:15:16.23:126,16,0	1/1:24,2:26:20.13:150,20,0	0/0:27,0:21:58.85:0,59,682	0/0:24,1:23:17.64:0,18,396	0/0:19,0:16:25.43:0,25,531	0/0:10,0:10:2.54:0,3,246	0/0:22,0:20:5.35:0,5,361	0/0:19,0:19:30.92:0,31,568	0/0:21,0:20:39:0,39,540	0/0:27,0:25:36.74:0,37,626	0/0:18,0:18:32.65:0,33,476	0/0:38,0:38:34.39:0,34,993	0/0:20,0:20:29.37:0,29,638	0/0:18,0:12:26.85:0,27,319	0/0:11,0:8:24.04:0,24,359	0/0:103,0:97:99:0,145,2463	0/0:12,0:11:26.88:0,27,402	0/0:9,0:9:24:0,24,366	0/0:48,0:48:65.98:0,66,1329	1/1:10,0:9:2.99:25,3,0	0/0:26,0:25:59.86:0,60,828	0/0:11,0:11:23.67:0,24,307	0/0:5,0:3:9.03:0,9,162
chr10	105194090	.	TAC	T	1129.38	PASS	AB=0.942;AC=19;AF=0.352;AN=54;BaseQRankSum=4.534;DP=643;FS=14.592;HRun=0;HaplotypeScore=112.9566;InbreedingCoeff=0.1773;MQ=50.06;MQ0=25;MQRankSum=1.189;QD=2.89;ReadPosRankSum=0.501;VQSLOD=1.5699;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:16.14:0,16,434	0/0:8,0:7:15.05:0,15,217	0/0:5,0:2:2.97:0,3,20	./.	0/0:17,0:16:21.65:0,22,241	0/1:21,0:21:2.93:3,0,40	0/1:32,0:31:0.24:0,0,1	1/1:25,0:16:5.03:64,5,0	0/0:30,1:29:2.05:0,2,407	0/1:27,0:25:60.33:60,0,180	0/0:15,0:15:2.83:0,3,44	0/1:28,1:27:5.13:5,0,260	0/0:22,0:21:13.05:0,13,183	0/0:24,0:23:32.94:0,33,452	0/1:24,1:23:20.84:21,0,153	0/0:17,0:17:17.71:0,18,267	0/1:26,7:35:65.25:65,0,534	0/1:22,1:23:3.84:4,0,366	1/1:8,5:10:12.03:136,12,0	1/1:15,1:13:12:116,12,0	1/1:82,11:86:73.31:688,73,0	0/1:16,0:15:17.36:17,0,137	0/0:11,0:11:21.01:0,21,244	0/0:38,0:38:15.63:0,16,621	0/1:9,0:8:0.11:0,0,0	0/0:27,0:26:23.48:0,23,321	0/1:8,8:16:31.37:104,0,31	0/1:11,0:9:2.03:2,0,230
chr10	105196692	.	T	TAAATAAAC	2621.97	PASS	AB=0.921;AC=5;AF=0.089;AN=56;BaseQRankSum=8.460;DP=387;FS=20.265;HRun=0;HaplotypeScore=131.3307;InbreedingCoeff=0.2804;MQ=64.17;MQ0=1;MQRankSum=-8.863;QD=39.73;ReadPosRankSum=0.192;VQSLOD=1.9081;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:30.06:0,30,701	0/0:5,0:5:15.05:0,15,372	0/0:15,0:11:8.90:0,9,128	0/0:6,0:4:5.70:0,6,29	0/0:23,0:23:66.18:0,66,1595	0/1:22,10:32:24.99:1501,0,25	0/1:9,0:9:3.78:4,0,39	0/0:23,0:22:63.15:0,63,1388	0/0:9,0:9:21.04:0,21,457	0/0:17,0:17:45.14:0,45,1061	0/0:12,0:12:24.05:0,24,540	0/0:6,0:6:14.98:0,15,345	0/0:1,0:1:3.01:0,3,82	0/0:11,0:11:24.05:0,24,517	0/0:6,0:6:12.03:0,12,255	0/0:14,0:14:27.02:0,27,406	0/0:36,0:36:78.22:0,78,2232	0/0:31,0:30:75.07:0,75,1662	0/0:27,0:26:72.10:0,72,1632	0/0:12,0:12:24.02:0,24,479	0/0:3,0:3:9.03:0,9,196	0/0:4,0:4:6.02:0,6,164	0/0:5,0:5:12:0,12,133	0/1:4,0:4:5.80:6,0,97	1/1:13,8:21:37.85:1224,38,0	0/0:15,0:15:42.14:0,42,1110	0/0:20,0:20:45.14:0,45,1119	0/0:8,0:8:21.05:0,21,463
chr10	105197735	.	T	TG	1429.98	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-0.115;DP=542;FS=3.880;HRun=5;HaplotypeScore=57.1611;InbreedingCoeff=0.9872;MQ=91.66;MQ0=0;MQRankSum=-2.266;QD=26.00;ReadPosRankSum=0.099;VQSLOD=2.7934;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,114,1224	0/0:5,0:5:15.04:0,15,161	0/0:24,0:24:54.59:0,55,575	0/0:34,0:34:83.80:0,84,843	0/0:16,0:16:45.11:0,45,484	1/1:2,13:15:39.13:507,39,0	1/1:2,19:21:48.16:631,48,0	0/0:23,0:23:63.16:0,63,677	0/0:18,0:18:48.12:0,48,515	0/0:22,0:22:51.12:0,51,548	0/0:10,0:10:27.05:0,27,282	0/0:18,0:18:45.11:0,45,484	0/0:18,0:18:42.08:0,42,443	0/0:12,0:12:33.08:0,33,355	0/0:22,0:22:60.15:0,60,645	0/0:19,0:19:54.14:0,54,580	0/0:32,0:32:84.21:0,84,903	0/0:17,0:17:45.11:0,45,483	0/0:16,0:15:33.07:0,33,347	0/0:11,0:11:21.05:0,21,226	0/0:36,0:36:93.23:0,93,999	0/0:10,0:10:24.06:0,24,258	0/0:6,0:6:18.05:0,18,193	0/0:28,0:28:78.16:0,78,826	1/1:3,16:19:33.11:434,33,0	0/0:19,0:19:57.13:0,57,597	0/0:22,0:22:63.16:0,63,677	0/0:7,0:7:21.05:0,21,226
chr10	105197839	.	CCA	C	451.59	PASS	AB=0.892;AC=17;AF=0.304;AN=56;BaseQRankSum=7.283;DP=464;FS=1.473;HRun=0;HaplotypeScore=69.4575;InbreedingCoeff=-0.0408;MQ=62.81;MQ0=6;MQRankSum=-1.097;QD=1.74;ReadPosRankSum=-0.347;VQSLOD=1.6387;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,5:30:47.81:48,0,320	0/0:9,0:9:3.01:0,3,37	0/0:14,0:11:3.01:0,3,45	0/0:27,0:15:0:0,0,0	0/0:9,0:9:15.05:0,15,215	1/1:5,0:11:17.04:84,17,0	1/1:17,1:25:20.05:117,20,0	0/0:16,0:16:9.02:0,9,100	0/1:13,2:15:12.30:12,0,227	0/0:8,0:8:6.02:0,6,90	0/0:5,0:5:6.02:0,6,89	0/1:13,3:16:12.30:12,0,248	0/1:13,0:13:12.32:12,0,115	0/1:10,1:10:24.35:24,0,82	0/0:12,0:12:15.05:0,15,227	0/1:13,1:14:15.32:15,0,204	0/0:34,1:35:35.84:0,36,941	0/1:29,0:29:15.58:16,0,577	0/0:9,0:8:4.25:0,4,29	0/0:16,0:16:3.01:0,3,43	0/0:32,0:35:11.98:0,12,103	0/1:12,1:13:21.33:21,0,123	0/1:7,2:9:21.34:21,0,123	0/1:32,6:38:54.99:55,0,480	1/1:7,0:15:19.89:98,20,0	0/1:14,5:19:78.83:79,0,118	0/0:3,0:4:8.93:0,9,66	0/0:5,0:5:6.02:0,6,87
chr10	105197878	.	AG	A	952.05	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.987;DP=494;FS=15.029;HRun=8;HaplotypeScore=65.0334;InbreedingCoeff=0.9771;MQ=75.81;MQ0=4;MQRankSum=-2.962;QD=17.96;ReadPosRankSum=2.331;VQSLOD=2.3970;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:84.26:0,84,1014	0/0:7,0:7:18.05:0,18,215	0/0:23,0:21:51.81:0,52,617	0/0:27,0:26:69.20:0,69,820	0/0:13,0:13:30.08:0,30,352	1/1:2,11:13:30.04:289,30,0	1/1:4,25:28:58.92:576,59,0	0/0:16,0:16:36.06:0,36,387	0/0:14,0:14:33.06:0,33,382	0/0:16,0:16:42.12:0,42,497	0/0:6,0:6:12.04:0,12,145	0/0:16,0:16:33.05:0,33,368	0/0:15,0:15:39.12:0,39,471	0/0:11,0:11:30.08:0,30,346	0/0:12,0:12:36.10:0,36,424	0/0:18,0:18:51.14:0,51,605	0/0:33,0:33:74.22:0,74,860	0/0:25,0:25:51.16:0,51,616	0/0:11,0:10:21.06:0,21,253	0/0:11,0:11:22.31:0,22,257	0/0:34,0:33:48.59:0,49,568	0/0:10,0:10:21.06:0,21,253	0/0:16,0:16:35.98:0,36,421	0/0:33,0:33:63.17:0,63,737	1/1:1,10:11:23.22:229,23,0	0/0:21,0:21:48.15:0,48,579	0/0:8,0:8:24.06:0,24,279	0/0:8,0:8:18.06:0,18,217
chr10	105199025	.	G	GTTAGGAGT	3545.69	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-4.921;DP=692;FS=17.024;HRun=0;HaplotypeScore=168.2432;InbreedingCoeff=0.9970;MQ=76.88;MQ0=0;MQRankSum=-8.186;QD=88.64;ReadPosRankSum=-0.173;VQSLOD=2.8588;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,4087	0/0:8,0:8:24.08:0,24,686	0/0:20,0:20:48.64:0,49,1346	0/0:21,0:20:43.37:0,43,1434	0/0:18,0:18:51.65:0,52,1467	1/1:0,10:15:30.10:1385,30,0	1/1:2,10:15:30.06:1192,30,0	0/0:20,0:20:48.07:0,48,1355	0/0:29,0:29:87.30:0,87,2526	0/0:32,0:32:96.32:0,96,2706	0/0:21,0:20:60.68:0,61,1738	0/0:32,0:32:96.33:0,96,2810	0/0:20,0:20:60.18:0,60,1701	0/0:21,0:21:60.21:0,60,1775	0/0:34,0:34:99:0,99,2967	0/0:24,0:24:66.20:0,66,1866	0/0:36,0:36:99:0,108,3063	0/0:16,0:16:48.16:0,48,1434	0/0:24,0:24:69.24:0,69,2042	0/0:11,0:11:33.11:0,33,903	0/0:60,0:60:99:0,169,4687	0/0:28,0:28:75.26:0,75,2199	0/0:18,0:18:51.18:0,51,1539	0/0:39,0:39:99:0,111,3244	1/1:3,7:10:21.07:969,21,0	0/0:41,0:41:99:0,120,3530	0/0:22,0:21:57.20:0,57,1727	0/0:9,0:9:27.04:0,27,680
chr10	105199423	.	C	CTG	322.70	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=4.253;DP=639;FS=5.431;HRun=0;HaplotypeScore=95.4106;InbreedingCoeff=0.7262;MQ=72.67;MQ0=15;MQRankSum=-2.431;QD=6.59;ReadPosRankSum=-2.171;VQSLOD=2.5154;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,129,1655	0/0:7,0:7:3.43:0,3,117	0/0:51,0:26:35.98:0,36,642	0/0:57,0:25:50.05:0,50,606	0/0:12,0:12:21.07:0,21,285	1/1:11,4:15:9.50:153,10,0	1/1:13,2:15:18.31:252,18,0	0/0:21,0:20:51.08:0,51,626	0/0:27,0:27:72.16:0,72,890	0/0:15,0:15:39.10:0,39,504	0/0:16,0:16:42.11:0,42,534	0/0:17,0:17:48.13:0,48,609	0/0:21,0:21:50.87:0,51,636	0/0:19,0:19:51.17:0,51,692	0/0:23,0:23:63.13:0,63,827	0/0:21,0:21:60.18:0,60,781	0/0:37,0:37:99:0,102,1286	0/0:24,0:24:66.16:0,66,848	0/0:19,0:19:44.83:0,45,532	0/1:8,0:8:6.26:6,0,145	0/0:35,0:35:20.46:0,20,281	0/0:18,0:18:38.96:0,39,526	0/0:19,0:19:51.16:0,51,675	0/0:35,0:35:99:0,101,1298	1/1:10,1:11:3.01:40,3,0	0/0:23,0:23:66.15:0,66,864	0/0:17,0:17:17.56:0,18,170	0/0:7,0:7:18.05:0,18,231
chr10	105199428	.	T	TCACACACACA	2157.73	PASS	AB=0.918;AC=14;AF=0.259;AN=54;BaseQRankSum=1.921;DP=678;FS=2.217;HRun=0;HaplotypeScore=190.4538;InbreedingCoeff=0.5640;MQ=66.49;MQ0=25;MQRankSum=-4.389;QD=10.08;ReadPosRankSum=-4.013;VQSLOD=1.8902;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:48,0:51:6.34:6,0,1534	0/0:3,0:7:3.73:0,4,80	0/0:58,0:25:9.67:0,10,160	0/0:60,0:22:5.65:0,6,70	0/0:11,0:11:15.05:0,15,407	0/1:17,0:16:11.65:57,0,12	1/1:16,0:16:5.47:47,5,0	1/1:26,0:24:33.10:685,33,0	0/0:22,0:25:51.17:0,51,1316	0/0:13,0:15:15.93:0,16,381	0/0:15,0:16:18.06:0,18,486	0/0:15,0:16:24.08:0,24,603	0/0:16,0:19:30.57:0,31,725	0/0:20,0:20:36.12:0,36,893	0/0:25,0:25:48.07:0,48,1109	0/0:18,0:21:34.93:0,35,863	0/0:35,0:39:87.10:0,87,2200	0/0:23,0:25:22.88:0,23,1177	1/1:23,0:23:36.11:902,36,0	./.	0/1:22,16:43:0.78:1,0,1	0/0:16,0:17:17.35:0,17,296	0/0:18,0:19:21.07:0,21,595	0/0:33,0:36:61.80:0,62,1670	1/1:1,0:10:3.01:86,3,0	0/0:25,0:25:41.72:0,42,1007	1/1:5,11:18:9.03:417,9,0	0/1:8,0:10:99:120,0,446
chr10	105199457	.	CGA	C	338.87	PASS	AB=0.945;AC=9;AF=0.161;AN=56;BaseQRankSum=5.113;DP=656;FS=3.108;HRun=0;HaplotypeScore=85.8338;InbreedingCoeff=0.5314;MQ=52.44;MQ0=25;MQRankSum=-1.837;QD=3.57;ReadPosRankSum=-2.845;VQSLOD=1.7755;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:14.21:0,14,1470	0/1:6,0:6:5.02:5,0,173	0/0:58,1:20:29.86:0,30,779	0/0:63,0:19:41.87:0,42,730	0/0:12,0:12:29.65:0,30,472	1/1:9,4:12:10.31:67,10,0	1/1:0,14:14:11.98:115,12,0	0/1:33,3:34:99:138,0,1193	0/0:28,0:28:66.88:0,67,1169	0/0:16,0:16:42.90:0,43,660	0/0:15,0:15:36.12:0,36,607	0/0:15,0:15:45.09:0,45,732	0/0:19,0:19:41.64:0,42,689	0/0:16,0:16:45.15:0,45,798	0/0:27,0:27:81.06:0,81,1311	0/0:16,0:16:46.49:0,46,738	0/0:35,0:35:98.39:0,98,1737	0/0:24,0:24:17.70:0,18,931	0/1:19,2:19:99:139,0,554	0/0:9,0:9:17.53:0,18,210	0/0:40,1:40:69.81:0,70,995	0/0:14,0:13:26.45:0,26,431	0/0:16,0:16:41.73:0,42,687	0/0:38,0:38:81.82:0,82,1807	1/1:5,0:5:2.84:14,3,0	0/0:20,0:20:60.17:0,60,1044	0/0:19,0:19:29.63:0,30,381	0/0:13,0:13:33.10:0,33,536
chr10	105199809	.	GAA	G	605.57	PASS	AB=0.944;AC=8;AF=0.143;AN=56;BaseQRankSum=6.789;DP=471;FS=0.000;HRun=12;HaplotypeScore=64.3136;InbreedingCoeff=0.6292;MQ=61.12;MQ0=9;MQRankSum=0.178;QD=8.91;ReadPosRankSum=2.894;VQSLOD=0.7906;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,3:34:1.50:0,1,1020	0/0:5,0:4:8.99:0,9,109	0/1:6,0:3:16.98:17,0,32	0/0:4,0:6:10.03:0,10,62	0/0:17,0:18:48.13:0,48,661	1/1:4,12:16:33.05:336,33,0	1/1:6,12:17:29.67:271,30,0	0/0:16,0:16:30:0,30,345	0/0:8,0:8:21.90:0,22,271	0/0:23,0:26:59.11:0,59,734	0/0:19,0:19:40.75:0,41,472	0/0:23,0:23:44.37:0,44,524	0/0:17,0:18:41.84:0,42,481	0/0:12,0:12:36.04:0,36,441	0/0:12,0:13:35.56:0,36,458	0/0:6,0:6:18.05:0,18,252	0/0:33,0:33:81.26:0,81,1172	0/0:15,0:15:36.06:0,36,458	0/0:16,0:16:38.68:0,39,506	0/0:17,0:18:48.12:0,48,658	0/1:14,2:15:21.92:22,0,434	0/0:15,0:17:44.57:0,45,559	0/0:16,0:16:35.97:0,36,442	0/0:26,0:26:60.18:0,60,857	1/1:3,8:11:11.96:110,12,0	0/0:17,0:19:45.09:0,45,562	0/0:22,0:23:51.05:0,51,586	0/0:11,0:10:18.03:0,18,244
chr10	105200593	.	AC	A	1487.22	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.685;DP=548;FS=0.591;HRun=3;HaplotypeScore=75.6542;InbreedingCoeff=0.9961;MQ=62.45;MQ0=0;MQRankSum=-8.647;QD=28.06;ReadPosRankSum=-2.740;VQSLOD=2.2141;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1512	0/0:6,0:6:18.06:0,18,250	0/0:13,0:13:36.12:0,36,519	0/0:12,0:11:33.11:0,33,463	0/0:22,0:22:57.18:0,57,801	1/1:2,20:22:57.18:705,57,0	1/1:1,11:12:27.08:333,27,0	0/0:24,0:24:72.23:0,72,1013	0/0:16,0:16:48.16:0,48,691	0/0:24,0:24:69.21:0,69,946	0/0:16,0:16:45.15:0,45,647	0/0:19,0:19:51.17:0,51,734	0/0:11,0:11:33.11:0,33,474	0/0:13,0:13:39.12:0,39,545	0/0:19,0:19:51.17:0,51,733	0/0:16,0:16:48.15:0,48,670	0/0:24,0:24:63.21:0,63,907	0/0:30,0:29:81.24:0,81,1144	0/0:14,0:14:39.13:0,39,568	0/0:21,0:21:57.18:0,57,799	0/0:33,0:33:87.29:0,87,1253	0/0:15,0:15:45.15:0,45,646	0/0:21,0:21:60.20:0,60,863	0/0:25,0:25:66.22:0,66,947	1/1:0,19:19:48.15:592,48,0	0/0:19,0:19:54.18:0,54,772	0/0:32,0:32:80.90:0,81,1162	0/0:12,0:12:27.09:0,27,389
chr10	105200655	.	A	AACAC	3007.50	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=-3.489;DP=427;FS=2.669;HRun=0;HaplotypeScore=103.2848;InbreedingCoeff=0.8501;MQ=56.49;MQ0=9;MQRankSum=-0.921;QD=27.09;ReadPosRankSum=-3.760;VQSLOD=2.9020;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:56.25:0,56,1007	1/1:1,0:6:9.03:158,9,0	./.	0/0:16,0:8:6.89:0,7,65	0/0:13,0:13:30.09:0,30,453	0/0:14,0:14:9.01:0,9,84	0/0:5,0:5:3.47:0,3,29	1/1:17,12:31:4.75:756,5,0	0/0:16,0:17:39.09:0,39,560	0/0:16,0:17:28.52:0,29,539	0/0:18,0:18:36.12:0,36,581	0/0:5,0:6:9.03:0,9,147	0/0:7,0:7:18.06:0,18,289	0/0:7,0:7:15.05:0,15,243	0/0:15,0:15:30.09:0,30,458	0/0:9,0:9:15.05:0,15,246	0/0:23,0:24:51.13:0,51,751	0/0:19,0:21:45.13:0,45,660	1/1:11,12:21:41.55:781,42,0	1/1:4,6:10:12.04:287,12,0	1/1:5,8:14:9.03:219,9,0	0/0:11,0:11:12.03:0,12,168	0/0:13,0:13:27.04:0,27,380	0/0:8,0:8:18:0,18,237	0/0:14,0:14:14.39:0,14,119	0/0:21,0:22:57.18:0,57,888	1/1:9,16:27:47.20:976,47,0	0/0:8,0:8:24.08:0,24,378
chr10	105200659	.	CA	C	130.10	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.488;DP=423;FS=0.000;HRun=1;HaplotypeScore=87.7373;InbreedingCoeff=0.8852;MQ=57.79;MQ0=9;MQRankSum=-6.221;QD=4.49;ReadPosRankSum=0.317;VQSLOD=0.0786;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.21:0,87,1341	0/0:7,0:7:18.02:0,18,199	0/0:18,0:5:9.03:0,9,115	0/0:15,0:7:17.35:0,17,212	0/0:15,0:15:39.13:0,39,604	1/1:10,3:13:20.66:131,21,0	1/1:2,2:4:4.54:34,5,0	0/0:30,0:30:87.24:0,87,1100	0/0:16,0:16:46.40:0,46,703	0/0:17,0:17:48.15:0,48,727	0/0:17,0:17:42.14:0,42,652	0/0:5,0:5:9.03:0,9,144	0/0:7,0:7:21.07:0,21,325	0/0:7,0:7:18.53:0,19,280	0/0:14,0:14:42.08:0,42,609	0/0:10,0:10:30.09:0,30,437	0/0:27,0:27:76.48:0,76,1107	0/0:21,0:21:59.96:0,60,823	0/0:23,0:21:63.14:0,63,753	0/0:11,0:11:24.05:0,24,275	0/0:12,0:12:15.02:0,15,166	0/0:11,0:10:24.08:0,24,344	0/0:11,0:11:30.10:0,30,469	0/0:8,0:8:21.07:0,21,326	1/1:6,6:12:16.75:95,17,0	0/0:22,0:22:64.46:0,64,982	0/0:29,0:29:68.94:0,69,745	0/0:8,0:8:24.08:0,24,383
chr10	105200661	.	CACACACACACACACA	C	997.87	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=5.929;DP=425;FS=0.000;HRun=0;HaplotypeScore=192.2592;InbreedingCoeff=0.7934;MQ=57.71;MQ0=9;MQRankSum=-3.914;QD=21.69;ReadPosRankSum=0.278;VQSLOD=2.6049;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.18:0,87,5684	0/0:7,0:7:18.53:0,19,1130	0/1:17,0:4:2.80:3,0,195	0/0:15,0:7:15.83:0,16,845	0/0:15,0:15:39.13:0,39,2625	1/1:10,3:13:9.03:340,9,0	1/1:2,2:4:6.02:208,6,0	0/0:30,0:30:87.30:0,87,4938	0/0:16,0:16:48.15:0,48,3060	0/0:19,0:19:54.19:0,54,3729	0/0:18,0:18:45.05:0,45,3089	0/0:5,0:5:9.03:0,9,673	0/0:7,0:7:21.07:0,21,1389	0/0:7,0:7:18.06:0,18,1314	0/0:14,0:14:40.38:0,40,2611	0/0:8,0:8:24.08:0,24,1711	0/0:27,0:27:81.23:0,81,4949	0/0:21,0:21:60.21:0,60,3613	0/0:22,0:20:60.21:0,60,3513	0/0:13,0:13:30.07:0,30,1486	0/0:13,0:13:18.06:0,18,1027	0/0:11,0:10:24.07:0,24,1174	0/0:11,0:11:29.99:0,30,2003	0/0:8,0:8:21.07:0,21,1425	1/1:6,6:12:17.99:575,18,0	0/0:22,0:22:66.23:0,66,4691	0/0:29,0:29:72.22:0,72,4395	0/0:8,0:8:24.08:0,24,1691
chr10	105200688	.	ACAT	A	1210.47	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.769;DP=387;FS=3.642;HRun=0;HaplotypeScore=93.1810;InbreedingCoeff=0.8545;MQ=60.55;MQ0=0;MQRankSum=-7.766;QD=44.83;ReadPosRankSum=2.498;VQSLOD=5.3499;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.26:0,81,1739	0/0:7,0:7:18.06:0,18,443	0/0:4,0:2:6.01:0,6,98	0/0:6,0:4:4.77:0,5,79	0/0:17,0:17:39.13:0,39,880	1/1:0,3:3:9.03:148,9,0	1/1:0,10:10:30.10:496,30,0	0/0:30,0:30:87.25:0,87,1857	0/0:11,0:11:33.11:0,33,751	0/0:21,0:21:63.22:0,63,1461	0/0:12,0:12:30.10:0,30,605	0/0:10,0:10:24.07:0,24,478	0/0:8,0:8:24.08:0,24,511	0/0:8,0:8:18.06:0,18,365	0/0:14,0:14:39.11:0,39,775	0/0:17,0:17:48.16:0,48,1131	0/0:20,0:20:60.21:0,60,1363	0/0:17,0:17:50.68:0,51,979	0/0:18,0:18:54.02:0,54,1136	0/0:8,0:8:21.07:0,21,512	0/0:13,0:13:30.10:0,30,674	0/0:4,0:4:6.02:0,6,109	0/0:9,0:9:21.07:0,21,517	0/0:5,0:5:15.05:0,15,290	1/1:0,14:14:42.14:703,42,0	0/0:24,0:24:72.25:0,72,1696	0/0:35,0:35:99:0,99,2201	0/0:13,0:13:39.13:0,39,888
chr10	105200716	.	T	TGA	1917.66	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.333;DP=437;FS=0.000;HRun=0;HaplotypeScore=79.5429;InbreedingCoeff=0.9863;MQ=74.82;MQ0=0;MQRankSum=-9.354;QD=46.77;ReadPosRankSum=-0.111;VQSLOD=4.8044;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.31:0,90,1463	0/0:6,0:6:18.02:0,18,264	0/0:9,0:9:27.09:0,27,440	0/0:12,0:12:30.10:0,30,483	0/0:20,0:20:57.19:0,57,928	1/1:3,5:8:20.94:337,21,0	1/1:3,12:15:42.01:742,42,0	0/0:36,0:36:99:0,105,1550	0/0:17,0:17:51.16:0,51,807	0/0:24,0:24:69.23:0,69,1124	0/0:14,0:14:39.13:0,39,635	0/0:14,0:14:42.14:0,42,682	0/0:11,0:11:27.09:0,27,440	0/0:12,0:12:30.10:0,30,488	0/0:12,0:12:36.12:0,36,587	0/0:16,0:16:48.16:0,48,761	0/0:15,0:15:45.15:0,45,733	0/0:15,0:15:45.15:0,45,733	0/0:14,0:14:42.12:0,42,634	0/0:7,0:7:21.06:0,21,315	0/0:16,0:16:45.13:0,45,688	0/0:5,0:5:15.05:0,15,244	0/0:10,0:10:27.09:0,27,438	0/0:8,0:8:24.06:0,24,366	1/1:1,15:18:51.17:980,51,0	0/0:22,0:22:66.20:0,66,1027	0/0:33,0:33:99:0,99,1604	0/0:18,0:18:54.18:0,54,880
chr10	105201035	.	CCACCGCCAT	C	349.77	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=6.017;DP=482;FS=0.000;HRun=0;HaplotypeScore=115.1643;InbreedingCoeff=0.6559;MQ=53.88;MQ0=17;MQRankSum=-6.071;QD=6.48;ReadPosRankSum=-0.606;VQSLOD=1.7866;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:92.79:0,93,3454	0/0:5,0:5:15.05:0,15,374	0/0:19,0:4:8.69:0,9,177	0/0:25,0:8:4.07:0,4,255	0/0:13,0:11:33.10:0,33,1066	1/1:2,10:12:12.04:209,12,0	1/1:2,17:19:9.03:182,9,0	0/0:14,0:12:32.98:0,33,719	0/0:25,0:25:68.90:0,69,2357	0/0:14,0:13:33.04:0,33,1105	0/0:7,0:7:13.29:0,13,481	0/0:15,0:15:36.12:0,36,1418	0/0:13,0:13:26.76:0,27,789	0/0:12,0:12:36.12:0,36,1344	0/0:15,0:15:39.13:0,39,1539	0/0:9,0:9:27.09:0,27,961	0/0:29,0:29:87.19:0,87,3273	0/0:19,0:19:54.19:0,54,2102	0/0:5,0:5:9.03:0,9,333	0/0:6,0:6:15.05:0,15,619	0/0:60,0:54:99:0,117,3773	0/0:11,0:11:33.11:0,33,1013	0/0:11,0:11:15.05:0,15,611	0/0:27,0:27:72.18:0,72,2617	1/1:2,6:8:3.01:70,3,0	0/0:17,0:17:50.86:0,51,1580	0/0:16,0:16:47.65:0,48,1486	0/1:15,0:15:18.13:18,0,836
chr10	105201490	.	AG	A	1642.29	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.525;DP=648;FS=2.520;HRun=2;HaplotypeScore=74.4917;InbreedingCoeff=0.9991;MQ=84.58;MQ0=0;MQRankSum=-3.713;QD=29.86;ReadPosRankSum=1.546;VQSLOD=3.3838;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,1892	0/0:12,0:12:36.12:0,36,539	0/0:23,0:23:63.20:0,63,884	0/0:23,0:23:65.29:0,65,824	0/0:20,0:20:57.19:0,57,835	1/1:0,12:12:33.10:385,33,0	1/1:2,27:29:78.23:910,78,0	0/0:27,0:27:75.25:0,75,1106	0/0:16,0:16:48.16:0,48,719	0/0:26,0:26:69.23:0,69,1013	0/0:13,0:13:39.13:0,39,584	0/0:22,0:22:66.22:0,66,989	0/0:18,0:18:54.17:0,54,788	0/0:24,0:24:72.20:0,72,1013	0/0:21,0:21:63.21:0,63,943	0/0:14,0:14:42.10:0,42,558	0/0:37,0:37:99:0,111,1622	0/0:36,0:36:99:0,105,1545	0/0:19,0:19:54.18:0,54,804	0/0:25,0:25:72.22:0,72,1034	0/0:57,0:57:99:0,165,2420	0/0:17,0:17:51.16:0,51,738	0/0:23,0:23:63.21:0,63,936	0/0:23,0:23:69.23:0,69,1034	1/1:0,14:14:42.12:490,42,0	0/0:24,0:24:69.17:0,69,969	0/0:19,0:19:57.14:0,57,828	0/0:8,0:8:24.08:0,24,351
chr10	105201680	.	ACCTGTC	A	218.49	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.092;DP=560;FS=15.156;HRun=0;HaplotypeScore=120.6958;InbreedingCoeff=0.8413;MQ=77.36;MQ0=23;MQRankSum=-2.547;QD=7.05;ReadPosRankSum=0.774;VQSLOD=0.9858;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:45.63:0,46,1613	0/0:8,0:8:24.08:0,24,860	0/0:51,0:19:53.31:0,53,1363	0/0:77,0:29:53.69:0,54,1243	0/0:27,0:27:62.62:0,63,2309	1/1:3,8:11:5.70:152,6,0	1/1:2,8:8:6.02:138,6,0	0/0:29,0:28:81.28:0,81,2903	0/0:16,0:16:44.90:0,45,1608	0/0:8,0:8:23.91:0,24,720	0/0:14,0:14:36.12:0,36,1271	0/0:22,0:22:63.22:0,63,2325	0/0:19,0:19:54.05:0,54,1785	0/0:16,0:16:48.03:0,48,1519	0/0:20,0:20:60.18:0,60,2107	0/0:17,0:17:48.16:0,48,1814	0/0:18,0:18:48.15:0,48,1657	0/0:27,0:27:78.25:0,78,2714	0/0:16,0:16:39.13:0,39,1354	0/0:12,0:12:36.12:0,36,1300	0/0:14,0:13:30.10:0,30,1126	0/0:16,0:16:48.16:0,48,1634	0/0:12,0:12:33.11:0,33,1188	0/0:13,0:13:33.11:0,33,1170	1/1:3,6:9:2.99:42,3,0	0/0:22,0:22:60.16:0,60,2122	0/0:16,0:16:48.06:0,48,1596	0/0:17,0:17:42.14:0,42,1531
chr10	105201723	.	A	ACAGTGCAG	1811.15	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.807;DP=534;FS=33.627;HRun=0;HaplotypeScore=143.1530;InbreedingCoeff=0.9700;MQ=95.17;MQ0=0;MQRankSum=-6.073;QD=72.45;ReadPosRankSum=0.164;VQSLOD=1.4982;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:92.02:0,92,2628	0/0:8,0:8:21.07:0,21,591	0/0:27,0:28:68.44:0,68,1703	0/0:30,0:29:70.88:0,71,1901	0/0:32,0:32:93.32:0,93,2617	1/1:3,6:9:9.03:397,9,0	1/1:4,4:8:15.05:621,15,0	0/0:38,0:38:99:0,105,2774	0/0:19,0:19:57.17:0,57,1448	0/0:17,0:17:48.16:0,48,1354	0/0:12,0:12:36.12:0,36,934	0/0:14,0:14:42.14:0,42,1179	0/0:17,0:17:51.18:0,51,1442	0/0:18,0:18:54.19:0,54,1469	0/0:17,0:17:51.18:0,51,1444	0/0:21,0:21:57.20:0,57,1536	0/0:20,0:20:57.20:0,57,1613	0/0:24,0:24:72.22:0,72,1889	0/0:16,0:16:42.14:0,42,1140	0/0:17,0:17:48.16:0,48,1354	0/0:21,0:21:57.18:0,57,1552	0/0:17,0:17:45.15:0,45,1273	0/0:20,0:20:57.20:0,57,1562	0/0:21,0:21:63.22:0,63,1733	1/1:3,5:8:21.07:927,21,0	0/0:17,0:17:42.14:0,42,1155	0/0:15,0:15:39.13:0,39,1060	0/0:16,0:16:48.14:0,48,1297
chr10	105202268	.	G	GC	754.18	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.020;DP=557;FS=4.406;HRun=0;HaplotypeScore=58.3830;InbreedingCoeff=0.9366;MQ=95.69;MQ0=0;MQRankSum=-5.590;QD=27.93;ReadPosRankSum=-1.131;VQSLOD=3.5980;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1390	0/0:3,0:3:9.03:0,9,126	0/0:28,0:28:48.42:0,48,911	0/0:27,0:27:63.46:0,63,765	0/0:28,0:28:81.25:0,81,1095	1/1:0,2:2:6.02:95,6,0	1/1:0,15:15:30.10:478,30,0	0/0:22,0:22:65.43:0,65,882	0/0:24,0:24:69.23:0,69,964	0/0:29,0:29:87.28:0,87,1197	0/0:20,0:20:57.17:0,57,772	0/0:28,0:28:84.28:0,84,1172	0/0:14,0:14:36.12:0,36,502	0/0:21,0:21:60.20:0,60,839	0/0:23,0:23:69.23:0,69,964	0/0:14,0:14:42.14:0,42,587	0/0:25,0:25:75.20:0,75,1009	0/0:18,0:18:54.18:0,54,755	0/0:17,0:17:42.14:0,42,586	0/0:22,0:22:66.20:0,66,902	0/0:19,0:19:51.17:0,51,713	0/0:25,0:25:75.24:0,75,1031	0/0:20,0:20:60.15:0,60,772	0/0:23,0:23:69.22:0,69,949	1/1:0,10:10:21.07:315,21,0	0/0:19,0:19:57.17:0,57,759	0/0:21,0:20:63.18:0,63,841	0/0:6,0:6:18.06:0,18,252
chr10	105202613	.	TG	T	1296.85	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.094;DP=829;FS=11.797;HRun=2;HaplotypeScore=100.1290;InbreedingCoeff=0.9984;MQ=65.16;MQ0=0;MQRankSum=-5.990;QD=27.02;ReadPosRankSum=2.687;VQSLOD=2.2868;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,150,2220	0/0:7,0:7:21.07:0,21,314	0/0:29,0:29:80.43:0,80,1243	0/0:36,0:35:93.27:0,93,1357	0/0:38,0:38:99:0,105,1569	1/1:0,16:16:36.12:467,36,0	1/1:2,15:17:42.14:545,42,0	0/0:30,0:30:87.28:0,87,1268	0/0:40,0:40:99:0,120,1775	0/0:29,0:29:84.28:0,84,1259	0/0:22,0:22:66.21:0,66,969	0/0:38,0:38:99:0,108,1594	0/0:33,0:33:99:0,99,1463	0/0:30,0:30:90.29:0,90,1328	0/0:38,0:38:99:0,114,1689	0/0:23,0:23:66.18:0,66,964	0/0:38,0:38:99:0,114,1684	0/0:30,0:30:87.29:0,87,1299	0/0:19,0:19:48.15:0,48,701	0/0:20,0:20:60.19:0,60,877	0/0:58,0:57:99:0,160,2361	0/0:21,0:21:57.19:0,57,849	0/0:17,0:17:48.16:0,48,718	0/0:46,0:46:99:0,135,1995	1/1:1,14:15:33.11:428,33,0	0/0:37,0:37:99:0,111,1664	0/0:32,0:32:84.27:0,84,1237	0/0:18,0:18:54.18:0,54,809
chr10	105202660	.	ATG	A	2939.15	PASS	AB=0.872;AC=27;AF=0.482;AN=56;BaseQRankSum=10.431;DP=826;FS=1.234;HRun=0;HaplotypeScore=126.6688;InbreedingCoeff=-0.0561;MQ=63.96;MQ0=11;MQRankSum=0.226;QD=5.45;ReadPosRankSum=1.334;VQSLOD=3.3308;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,1:53:62.61:0,63,1381	1/1:3,2:6:5.85:48,6,0	0/0:34,0:22:6.02:0,6,92	0/0:38,1:22:18.06:0,18,263	0/1:32,2:34:17.25:17,0,612	1/1:9,0:9:1.25:3,1,0	1/1:13,0:13:0.77:3,1,0	0/1:18,7:25:22.34:175,0,22	0/0:39,2:41:12.79:0,13,1034	0/1:36,3:39:32.49:32,0,835	0/0:16,0:16:18.06:0,18,277	0/1:14,15:29:50.29:368,0,50	0/1:29,2:31:19.01:19,0,790	0/1:30,2:32:34.05:34,0,584	0/1:40,5:45:55.90:56,0,939	0/1:15,3:18:32.27:32,0,426	0/1:32,5:38:99:106,0,655	0/0:29,0:29:60.19:0,60,876	0/1:16,3:19:29.99:90,0,30	1/1:6,7:15:23.70:231,24,0	1/1:31,49:84:77.20:1223,77,0	0/0:19,1:20:13.98:0,14,654	0/1:10,1:11:19.12:19,0,163	0/0:50,3:55:11.35:0,11,1330	1/1:11,0:12:1.73:24,2,0	0/1:28,2:31:21.22:21,0,698	1/1:12,17:32:56.49:569,56,0	0/1:11,3:14:39.90:40,0,80
chr10	105202691	.	TAC	T	258.62	PASS	AB=0.837;AC=6;AF=0.107;AN=56;BaseQRankSum=7.691;DP=835;FS=23.829;HRun=0;HaplotypeScore=129.6487;InbreedingCoeff=0.5923;MQ=54.51;MQ0=16;MQRankSum=-0.375;QD=8.92;ReadPosRankSum=-2.376;VQSLOD=1.3248;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,1:46:82.69:0,83,1885	0/0:5,0:5:6.45:0,6,57	0/0:47,0:10:28.79:0,29,393	0/0:64,0:14:33.11:0,33,538	0/0:25,0:25:55.53:0,56,991	0/1:2,1:3:21.24:28,0,21	1/1:4,5:9:15.04:175,15,0	0/0:30,0:28:70.38:0,70,1005	0/0:38,1:39:52.71:0,53,1652	0/0:39,0:39:99:0,102,1686	0/0:14,0:13:36.11:0,36,574	0/0:27,1:28:58.13:0,58,682	0/0:32,0:32:78.24:0,78,1315	0/0:26,1:27:17.70:0,18,1018	0/0:37,0:37:99:0,102,1626	0/0:19,0:19:50.90:0,51,836	0/0:34,1:35:99:0,103,1516	0/0:25,0:25:69.17:0,69,1208	0/0:21,0:21:43.03:0,43,814	0/0:19,0:19:45.83:0,46,529	0/0:88,1:88:99:0,148,1706	0/0:27,0:28:74.89:0,75,1301	0/0:11,0:11:29.97:0,30,481	0/0:56,3:59:99:0,147,2433	1/1:4,1:5:15.04:172,15,0	0/0:37,0:37:66.75:0,67,1644	0/0:30,0:30:50.67:0,51,576	0/1:11,1:12:14.33:14,0,381
chr10	105202743	.	TGTGCGA	T	161.76	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=7.329;DP=848;FS=0.925;HRun=0;HaplotypeScore=190.4348;InbreedingCoeff=0.9890;MQ=62.07;MQ0=4;MQRankSum=-4.023;QD=7.03;ReadPosRankSum=-4.629;VQSLOD=1.4104;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,138,4290	0/0:8,0:8:17.81:0,18,371	0/0:44,0:28:75.87:0,76,1618	0/0:43,1:31:43.83:0,44,1672	0/0:16,0:16:39.11:0,39,1156	1/1:4,4:8:17.60:106,18,0	1/1:11,4:15:21.77:173,22,0	0/0:23,0:23:60.16:0,60,1470	0/0:35,0:35:93.19:0,93,2622	0/0:32,0:32:93.28:0,93,2690	0/0:21,0:21:60.21:0,60,2085	0/0:28,0:28:78.27:0,78,2610	0/0:29,0:29:81.24:0,81,2450	0/0:31,0:31:90.24:0,90,2664	0/0:27,0:27:75.24:0,75,2312	0/0:25,0:25:69.19:0,69,2113	0/0:33,0:33:93.27:0,93,2800	0/0:39,0:39:99:0,114,3222	0/0:32,0:29:87.27:0,87,2369	0/0:21,0:21:42.13:0,42,1369	0/0:123,0:123:99:0,333,9996	0/0:19,0:19:51.17:0,51,1593	0/0:16,0:16:39.13:0,39,1246	0/0:52,0:52:99:0,137,4228	./.	0/0:34,0:34:96.31:0,96,3000	0/0:22,0:22:38.13:0,38,1517	0/0:17,0:17:42.14:0,42,1484
chr10	105202833	.	G	GCA	46.67	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=4.516;DP=779;FS=9.675;HRun=0;HaplotypeScore=115.3062;InbreedingCoeff=0.9328;MQ=54.09;MQ0=11;MQRankSum=-4.285;QD=2.12;ReadPosRankSum=-2.433;VQSLOD=0.8602;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,123,2295	0/0:9,0:9:24.08:0,24,388	0/0:57,0:16:48.12:0,48,741	0/0:35,0:12:32.93:0,33,473	0/0:11,0:11:24.02:0,24,385	0/0:12,0:11:11.63:0,12,173	1/1:18,4:22:17.21:136,17,0	0/0:34,0:34:99:0,102,1638	0/0:28,0:28:75.26:0,75,1211	0/0:29,0:29:84.25:0,84,1318	0/0:10,0:10:18.06:0,18,294	0/0:20,0:20:57.19:0,57,926	0/0:18,0:18:51.17:0,51,817	0/0:23,0:23:66.22:0,66,1062	0/0:34,0:34:90.26:0,90,1392	0/0:11,0:11:33.11:0,33,532	0/0:53,0:53:99:0,157,2528	0/0:48,0:48:99:0,141,2269	0/0:20,0:19:54.17:0,54,841	0/0:7,0:7:18.06:0,18,294	0/0:128,0:128:99:0,358,5708	0/0:8,0:8:20.69:0,21,341	0/0:13,0:13:33.11:0,33,538	0/0:43,0:43:99:0,115,1853	./.	0/0:24,0:24:69.20:0,69,1046	0/0:14,0:14:39.60:0,40,632	0/0:9,0:9:24.05:0,24,341
chr10	105202957	.	C	CTT	1306.46	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.669;DP=411;FS=3.628;HRun=8;HaplotypeScore=53.9492;InbreedingCoeff=0.9582;MQ=75.07;MQ0=0;MQRankSum=-5.924;QD=33.50;ReadPosRankSum=0.908;VQSLOD=3.6103;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:72.17:0,72,791	0/0:7,0:7:21.06:0,21,234	0/0:12,0:13:23.50:0,23,266	0/0:12,0:12:10.41:0,10,162	0/0:20,0:20:54.14:0,54,601	1/1:0,5:5:15.05:238,15,0	1/1:3,12:15:30.06:448,30,0	0/0:32,0:32:69.15:0,69,761	0/0:12,0:12:30.08:0,30,333	0/0:18,0:19:42.04:0,42,521	0/0:13,0:13:33.08:0,33,368	0/0:14,0:14:30.05:0,30,334	0/0:7,0:7:18.04:0,18,201	0/0:12,0:12:27.07:0,27,301	0/0:15,0:15:36.08:0,36,392	0/0:8,0:8:21.06:0,21,234	0/0:23,0:23:66.18:0,66,735	0/0:21,0:21:60.14:0,60,657	0/0:22,0:22:51.12:0,51,568	0/0:14,0:14:33.07:0,33,368	0/0:15,0:15:27.03:0,27,292	0/0:7,0:7:15.01:0,15,158	0/0:5,0:5:15.04:0,15,167	0/0:10,0:10:21.05:0,21,234	1/1:2,16:19:50.66:761,51,0	0/0:18,0:18:51.14:0,51,569	0/0:12,0:12:27.06:0,27,301	0/0:10,0:10:30.08:0,30,334
chr10	105203000	.	TTTATTA	T	957.90	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=7.077;DP=310;FS=7.989;HRun=0;HaplotypeScore=66.3298;InbreedingCoeff=0.6556;MQ=65.66;MQ0=0;MQRankSum=-5.109;QD=33.03;ReadPosRankSum=-0.265;VQSLOD=2.1546;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.28:0,81,2903	0/0:3,0:3:9.03:0,9,208	0/0:10,0:8:23.84:0,24,643	0/1:9,0:8:8.12:8,0,326	0/0:9,0:9:27.09:0,27,818	1/1:0,2:2:6.02:151,6,0	1/1:2,3:5:12.04:212,12,0	0/0:42,0:42:99:0,123,4136	0/0:3,0:3:9.03:0,9,300	0/0:13,0:13:39.13:0,39,1282	0/0:7,0:7:21.07:0,21,720	0/0:8,0:8:24.07:0,24,799	0/0:6,0:6:18.06:0,18,562	0/0:4,0:4:12.02:0,12,212	0/0:6,0:6:18.06:0,18,574	0/0:4,0:4:12.04:0,12,314	0/0:26,0:26:66.23:0,66,2251	0/0:24,1:25:6.89:0,7,2176	0/0:20,0:20:60.21:0,60,2015	0/0:10,0:10:28.90:0,29,916	0/0:3,0:3:9.03:0,9,277	0/0:2,0:2:6.02:0,6,150	0/0:2,0:2:6.02:0,6,160	0/0:3,0:3:9.03:0,9,338	1/1:4,9:13:33.08:721,33,0	0/0:19,0:19:57.20:0,57,2009	0/0:9,0:9:27.09:0,27,976	0/0:18,0:18:54.19:0,54,2032
chr10	105203885	.	GC	G	1677.97	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.825;DP=579;FS=3.284;HRun=3;HaplotypeScore=55.8183;InbreedingCoeff=0.9605;MQ=79.25;MQ0=0;MQRankSum=0.109;QD=31.07;ReadPosRankSum=0.785;VQSLOD=3.4465;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,166,2353	0/0:16,0:16:48.16:0,48,687	0/0:11,0:11:6.62:0,7,189	0/0:15,0:17:21.62:0,22,348	0/0:18,0:18:51.17:0,51,734	1/1:0,19:19:54.17:669,54,0	1/1:0,20:20:54.17:669,54,0	0/0:13,0:13:30.10:0,30,432	0/0:23,0:23:66.22:0,66,948	0/0:16,0:16:48.16:0,48,691	0/0:14,0:14:36.12:0,36,518	0/0:21,0:21:63.21:0,63,893	0/0:21,0:21:51.17:0,51,731	0/0:23,0:23:66.22:0,66,950	0/0:23,0:23:66.22:0,66,950	0/0:15,0:15:45.15:0,45,647	0/0:34,0:34:99:0,99,1425	0/0:26,0:26:75.25:0,75,1072	0/0:21,0:21:63.21:0,63,907	0/0:12,0:12:36.12:0,36,518	0/0:37,0:37:99:0,108,1536	0/0:17,0:17:51.16:0,51,701	0/0:11,0:11:33.11:0,33,474	0/0:30,0:30:87.29:0,87,1252	1/1:0,15:15:39.12:482,39,0	0/0:20,0:20:60.19:0,60,846	0/0:23,0:23:69.23:0,69,993	0/0:5,0:5:15:0,15,159
chr10	105204633	.	G	GGAA	783.66	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.182;DP=596;FS=15.063;HRun=0;HaplotypeScore=122.9841;InbreedingCoeff=0.9484;MQ=80.05;MQ0=0;MQRankSum=-5.403;QD=22.39;ReadPosRankSum=-1.070;VQSLOD=2.3749;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,120,1927	0/0:5,0:5:15.05:0,15,241	0/0:23,0:22:57.14:0,57,838	0/0:20,0:19:8.61:0,9,364	0/0:18,0:18:47.93:0,48,743	1/1:6,8:14:19.26:350,19,0	1/1:2,7:9:10.28:190,10,0	0/0:15,0:15:39.11:0,39,582	0/0:21,0:21:57.19:0,57,913	0/0:25,0:25:69.19:0,69,1075	0/0:11,0:11:27.09:0,27,434	0/0:30,0:30:81.23:0,81,1266	0/0:17,0:17:47.94:0,48,683	0/0:19,0:19:51.14:0,51,770	0/0:32,0:32:87.28:0,87,1373	0/0:26,0:26:72.21:0,72,1125	0/0:21,0:21:63.21:0,63,1005	0/0:16,0:16:36.11:0,36,550	0/0:17,0:17:48.11:0,48,738	0/0:22,0:22:63.21:0,63,1003	0/0:27,0:27:72.25:0,72,1155	0/0:24,0:24:54.18:0,54,866	0/0:18,0:18:45.15:0,45,722	0/0:41,0:41:99:0,114,1740	1/1:3,9:12:17.06:378,17,0	0/0:35,0:35:90.17:0,90,1435	0/0:24,0:24:54.18:0,54,857	0/0:7,0:7:21.07:0,21,331
chr10	105204689	.	A	AAGT	305.10	PASS	AB=0.866;AC=5;AF=0.089;AN=56;BaseQRankSum=4.256;DP=333;FS=10.709;HRun=0;HaplotypeScore=96.0374;InbreedingCoeff=-0.1110;MQ=59.52;MQ0=0;MQRankSum=-3.859;QD=4.62;ReadPosRankSum=1.133;VQSLOD=1.5425;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:44.96:0,45,681	0/0:5,0:5:15.05:0,15,274	0/0:11,0:11:21.72:0,22,395	0/0:14,0:12:15.06:0,15,517	0/0:7,0:7:14.93:0,15,243	0/1:10,2:12:21.09:21,0,419	0/1:10,1:11:27.48:27,0,317	0/0:15,0:15:32.81:0,33,602	0/1:7,1:8:17.76:18,0,224	0/0:14,0:14:11.08:0,11,692	0/0:8,0:8:17.11:0,17,297	0/0:14,0:14:39.13:0,39,705	0/0:9,0:9:27.08:0,27,464	0/0:6,0:6:18.06:0,18,330	0/0:17,0:17:45.07:0,45,727	0/0:11,0:11:33.09:0,33,555	0/0:11,0:11:30.09:0,30,527	0/0:7,0:7:15.05:0,15,279	0/1:11,1:12:32.89:33,0,447	0/0:11,0:11:18.21:0,18,457	0/0:23,0:23:60.20:0,60,1085	0/0:16,0:16:39.13:0,39,721	0/0:5,0:5:15.05:0,15,278	0/0:19,0:19:34.86:0,35,644	0/1:15,8:23:99:322,0,416	0/0:16,0:16:45.12:0,45,773	0/0:10,0:10:30.10:0,30,553	0/0:1,0:1:3.01:0,3,56
chr10	105205374	.	G	GGA	656.97	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=4.581;DP=223;FS=51.814;HRun=0;HaplotypeScore=76.8073;InbreedingCoeff=0.0910;MQ=49.06;MQ0=3;MQRankSum=-5.418;QD=6.44;ReadPosRankSum=4.053;VQSLOD=1.2165;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:42.94:0,43,531	0/0:1,0:1:3.01:0,3,43	0/0:5,0:2:2.53:0,3,38	0/0:8,0:5:8.80:0,9,100	0/0:11,0:10:12.38:0,12,101	1/1:0,2:2:6.02:110,6,0	1/1:3,3:7:8.33:99,8,0	0/1:20,0:18:99:267,0,169	0/1:4,0:4:17.85:18,0,32	0/0:10,0:9:20.06:0,20,204	0/0:4,0:4:3.01:0,3,41	0/0:8,0:8:20.96:0,21,223	0/1:5,0:5:38.64:39,0,58	0/0:9,0:9:16.38:0,16,169	0/1:9,0:9:5.59:6,0,165	0/1:10,0:10:34.06:34,0,130	0/0:8,0:8:19.61:0,20,220	0/0:2,0:2:6.01:0,6,64	0/1:8,0:8:19.31:19,0,239	0/0:4,0:4:12.02:0,12,147	0/0:11,0:11:23.40:0,23,243	0/0:10,0:10:20.95:0,21,210	0/0:6,0:6:9:0,9,115	0/1:18,0:18:16.01:16,0,105	1/1:0,4:4:12.04:200,12,0	0/1:15,0:13:4.23:4,0,179	0/0:4,0:4:3.01:0,3,40	0/0:1,0:1:2.98:0,3,21
chr10	105205431	.	G	GC	77.16	PASS	AB=0.844;AC=6;AF=0.107;AN=56;BaseQRankSum=7.990;DP=504;FS=56.121;HRun=0;HaplotypeScore=109.9516;InbreedingCoeff=-0.1186;MQ=64.67;MQ0=2;MQRankSum=-6.456;QD=0.95;ReadPosRankSum=-1.417;VQSLOD=-0.7037;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:86.30:0,86,1082	0/1:6,2:8:22.24:22,0,190	0/0:35,0:24:59.47:0,59,785	0/0:38,0:27:44.13:0,44,593	0/0:13,0:13:36.11:0,36,485	0/0:5,1:6:5.62:0,6,145	0/0:9,0:9:15.05:0,15,209	0/0:22,0:22:54.18:0,54,751	0/0:11,0:12:33.11:0,33,461	0/1:17,3:20:33.08:33,0,618	0/0:11,0:11:30.10:0,30,413	0/0:20,0:20:57.13:0,57,795	0/0:11,0:11:25.40:0,25,374	0/1:8,1:9:5.94:6,0,228	0/0:21,0:22:60.11:0,60,794	0/0:13,2:15:11.93:0,12,468	0/0:21,0:21:54.13:0,54,715	0/0:10,0:10:30.10:0,30,419	0/0:14,0:13:39.13:0,39,545	0/1:13,3:16:39.09:39,0,456	0/0:33,0:33:86.40:0,86,1191	0/0:24,1:25:58.95:0,59,934	0/0:16,2:19:14.52:0,15,624	0/0:23,1:25:30.19:0,30,681	0/1:6,3:9:87.51:88,0,136	0/0:15,0:15:45.15:0,45,625	0/1:17,2:19:5.94:6,0,593	0/0:10,0:12:29.22:0,29,333
chr10	105205538	.	A	AGAG	1336.60	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.360;DP=585;FS=42.711;HRun=0;HaplotypeScore=99.0301;InbreedingCoeff=0.8986;MQ=66.58;MQ0=7;MQRankSum=-7.554;QD=39.31;ReadPosRankSum=-0.232;VQSLOD=2.2117;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:84.26:0,84,1276	0/0:3,0:3:6.02:0,6,93	0/0:47,0:26:36.37:0,36,726	0/0:56,0:40:70.78:0,71,985	0/0:17,0:17:42.13:0,42,626	1/1:5,12:18:45.15:884,45,0	1/1:4,7:11:18.06:360,18,0	0/0:33,0:33:75.24:0,75,1117	0/0:14,0:14:42.13:0,42,626	0/0:14,0:14:36.12:0,36,556	0/0:7,0:7:21.07:0,21,325	0/0:18,0:18:48.16:0,48,743	0/0:18,0:18:48.16:0,48,741	0/0:18,0:18:51.17:0,51,788	0/0:25,0:25:69.21:0,69,1040	0/0:16,0:16:45.13:0,45,652	0/0:25,0:25:60.63:0,61,902	0/0:18,0:18:48.16:0,48,743	0/0:13,0:13:27.07:0,27,357	0/0:17,0:17:48.15:0,48,722	0/0:46,0:46:99:0,126,1879	0/0:18,0:18:42.13:0,42,630	0/0:18,0:18:3.88:0,4,565	0/0:29,0:28:69.21:0,69,1026	1/1:1,4:5:12.04:230,12,0	0/0:17,0:17:48.15:0,48,703	0/0:16,0:16:45.15:0,45,694	0/0:11,0:11:27.06:0,27,374
chr10	105205574	.	G	GA	427.03	PASS	AB=0.745;AC=3;AF=0.054;AN=56;BaseQRankSum=7.501;DP=528;FS=16.458;HRun=1;HaplotypeScore=78.5730;InbreedingCoeff=-0.0556;MQ=73.97;MQ0=3;MQRankSum=-5.111;QD=11.54;ReadPosRankSum=-0.812;VQSLOD=0.4969;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1311	0/0:5,0:5:15.05:0,15,203	0/0:31,0:27:64.59:0,65,803	0/0:26,0:22:49.39:0,49,615	0/0:14,0:14:35.97:0,36,419	0/1:13,5:18:40.34:182,0,40	0/1:9,5:14:24.92:290,0,25	0/0:32,0:32:60.05:0,60,791	0/0:20,0:20:60.18:0,60,806	0/0:6,0:6:15.03:0,15,186	0/0:4,0:4:12.02:0,12,149	0/0:19,0:19:54.15:0,54,702	0/0:18,0:18:54.10:0,54,664	0/0:18,0:18:51.14:0,51,670	0/0:28,0:28:81.23:0,81,1043	0/0:18,0:18:36.48:0,36,688	0/0:24,0:24:70.42:0,70,917	0/0:17,0:17:48.08:0,48,596	0/0:18,0:18:51.11:0,51,640	0/0:13,0:13:36.12:0,36,500	0/0:50,0:50:99:0,135,1762	0/0:13,0:13:36.11:0,36,486	0/0:13,0:13:36.04:0,36,457	0/0:24,0:23:63.14:0,63,827	0/1:3,2:5:27.13:55,0,27	0/0:17,0:17:45.11:0,45,573	0/0:17,0:17:49.05:0,49,668	0/0:12,0:12:33.10:0,33,443
chr10	105205923	.	TACTAAAACTGACCA	T	2760.99	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.213;DP=529;FS=2.921;HRun=0;HaplotypeScore=200.8648;InbreedingCoeff=0.9588;MQ=82.44;MQ0=0;MQRankSum=-7.678;QD=86.28;ReadPosRankSum=-0.569;VQSLOD=3.1517;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:96.29:0,96,6292	0/0:12,0:12:36.12:0,36,2180	0/0:38,0:38:99:0,110,5760	0/0:24,0:24:72.24:0,72,4177	0/0:18,0:18:51.16:0,51,3464	1/1:0,11:11:24.08:1045,24,0	1/1:0,19:19:36.12:1585,36,0	0/0:25,0:25:75.25:0,75,4110	0/0:20,0:20:60.21:0,60,4004	0/0:13,0:13:39.13:0,39,2683	0/0:13,0:13:39.12:0,39,2217	0/0:14,0:14:42.14:0,42,2658	0/0:11,0:11:30.10:0,30,2048	0/0:15,0:15:45.14:0,45,2789	0/0:22,0:22:66.20:0,66,4372	0/0:21,0:21:63.22:0,63,4202	0/0:21,0:20:54.18:0,54,3723	0/0:15,0:15:42.14:0,42,2724	0/0:16,0:16:48.15:0,48,2803	0/0:13,0:13:39.12:0,39,2268	0/0:29,0:29:84.27:0,84,5391	0/0:11,0:11:33.11:0,33,2347	0/0:12,0:12:36.12:0,36,2474	0/0:38,0:37:99:0,111,7484	1/1:0,2:2:6.02:265,6,0	0/0:23,0:23:69.22:0,69,4132	0/0:27,0:26:81.24:0,81,4955	0/0:7,0:7:21.07:0,21,1516
chr10	105205956	.	A	AACAC	280.39	PASS	AB=1.000;AC=19;AF=0.432;AN=44;BaseQRankSum=0.879;DP=519;FS=6.880;HRun=0;HaplotypeScore=127.6086;InbreedingCoeff=0.3130;MQ=57.82;MQ0=8;MQRankSum=-1.975;QD=1.27;ReadPosRankSum=-3.988;VQSLOD=0.4140;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,12:48:2.99:69,3,0	0/1:7,0:7:0:1,0,0	./.	./.	./.	1/1:17,0:17:9.03:183,9,0	1/1:25,1:26:1.25:3,1,0	1/1:28,0:28:1.55:4,2,0	0/1:14,0:14:0:0,0,0	0/0:15,0:15:5.68:0,6,30	0/0:10,0:9:6.01:0,6,91	0/0:14,0:13:4.82:0,5,51	./.	0/1:10,0:10:0:0,0,0	0/0:18,0:18:4.82:0,5,57	0/0:18,0:18:9.02:0,9,119	0/1:23,0:22:12.80:13,0,40	0/1:20,0:22:51.67:52,0,128	0/0:18,0:19:3:0,3,28	0/0:10,0:12:5.99:0,6,51	./.	./.	1/1:8,0:12:2.59:12,3,0	0/0:37,0:37:15.05:0,15,228	1/1:7,0:7:3:61,3,0	0/0:15,0:14:2.05:0,2,44	0/0:15,0:16:6.01:0,6,56	1/1:6,0:6:0.89:2,1,0
chr10	105206158	.	AAAG	A	236.86	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=6.996;DP=644;FS=0.930;HRun=0;HaplotypeScore=91.8669;InbreedingCoeff=0.8088;MQ=58.24;MQ0=7;MQRankSum=-2.329;QD=6.77;ReadPosRankSum=-0.631;VQSLOD=2.2629;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:99:0,132,2117	0/1:10,0:10:3.41:105,0,3	0/0:33,0:19:31:0,31,509	0/0:39,0:25:37.80:0,38,661	0/0:28,0:28:78.21:0,78,1427	1/1:5,4:9:10.85:115,11,0	1/1:2,9:10:6.02:77,6,0	0/0:26,0:26:67.98:0,68,991	0/0:22,0:22:63.15:0,63,1167	0/0:22,0:22:51.15:0,51,896	0/0:21,0:21:60.17:0,60,1138	0/0:23,0:23:66.15:0,66,1188	0/0:13,0:13:33.08:0,33,590	0/0:23,0:23:66.16:0,66,1186	0/0:19,0:19:53.25:0,53,871	0/0:20,0:20:57.15:0,57,1027	0/0:18,0:18:51.05:0,51,895	0/0:23,0:23:66.18:0,66,1282	0/0:15,0:14:39.09:0,39,611	0/0:27,0:27:78.23:0,78,1518	0/0:20,0:20:54.13:0,54,973	0/0:26,0:26:72.18:0,72,1300	0/0:26,0:26:69.02:0,69,1152	0/0:42,0:42:99:0,120,2280	1/1:4,1:5:6.59:70,7,0	0/0:37,0:37:93.19:0,93,1546	0/0:28,0:28:72.13:0,72,1208	0/0:8,0:8:20.96:0,21,279
chr10	105206165	.	AAGG	A	265.45	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=5.092;DP=641;FS=0.000;HRun=0;HaplotypeScore=92.1162;InbreedingCoeff=0.5697;MQ=58.31;MQ0=13;MQRankSum=-0.994;QD=7.58;ReadPosRankSum=1.006;VQSLOD=2.6728;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:99:0,111,2007	1/1:1,10:11:20.94:311,21,0	0/0:30,0:16:22.27:0,22,346	0/0:33,0:20:30.03:0,30,449	0/0:28,0:27:69.23:0,69,1364	0/1:8,0:8:25.42:25,0,41	1/1:12,0:10:5.90:41,6,0	0/0:28,0:28:63.06:0,63,948	0/0:24,0:24:63.15:0,63,1105	0/0:19,0:19:45.14:0,45,840	0/0:21,0:21:54.16:0,54,1050	0/0:22,0:22:51.17:0,51,1046	0/0:14,0:14:39.10:0,39,709	0/0:25,0:25:66.18:0,66,1172	0/0:18,0:18:45.14:0,45,835	0/0:21,0:21:60.14:0,60,1033	0/0:20,0:20:48.07:0,48,860	0/0:25,0:25:66.17:0,66,1243	0/0:18,0:15:27.08:0,27,475	0/0:27,0:27:75.22:0,75,1463	0/0:20,0:20:48.13:0,48,894	0/0:25,0:25:66.20:0,66,1263	0/0:23,0:23:48.06:0,48,953	0/0:45,0:45:99:0,117,2228	0/1:4,0:4:14.62:15,0,42	0/0:35,0:34:81.27:0,81,1595	0/0:28,0:28:65.73:0,66,1140	0/0:7,0:7:12.04:0,12,239
chr10	105206710	.	C	CT	1595.97	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.353;DP=729;FS=4.834;HRun=1;HaplotypeScore=93.9343;InbreedingCoeff=0.9928;MQ=93.46;MQ0=0;MQRankSum=-8.521;QD=35.47;ReadPosRankSum=-1.110;VQSLOD=3.2063;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,1584	0/0:5,0:5:15.05:0,15,195	0/0:34,0:34:93.23:0,93,1136	0/0:31,0:31:83.27:0,83,1033	0/0:30,0:30:81.01:0,81,1017	1/1:0,10:10:21.07:314,21,0	1/1:2,21:22:60.20:897,60,0	0/0:36,0:36:99:0,102,1311	0/0:27,0:27:81.25:0,81,1036	0/0:20,0:20:51.17:0,51,662	0/0:23,0:23:66.20:0,66,842	0/0:26,0:26:75.23:0,75,959	0/0:21,0:21:63.20:0,63,814	0/0:25,0:25:75.23:0,75,957	0/0:34,0:34:99:0,102,1309	0/0:22,0:22:63.19:0,63,803	0/0:41,0:41:99:0,117,1513	0/0:12,0:12:33.11:0,33,428	0/0:27,0:27:78.23:0,78,983	0/0:23,0:23:69.20:0,69,867	0/0:58,0:58:99:0,169,2149	0/0:15,0:15:45.14:0,45,571	0/0:20,0:20:60.18:0,60,765	0/0:36,0:36:99:0,105,1329	1/1:0,12:12:36.12:528,36,0	0/0:30,0:30:90.28:0,90,1156	0/0:23,0:22:69.21:0,69,878	0/0:23,0:23:69.20:0,69,879
chr10	105206722	.	G	GCATCTGCTTTCAAATTC	9696.39	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.030;DP=741;FS=17.098;HRun=0;HaplotypeScore=334.5817;InbreedingCoeff=0.9981;MQ=90.99;MQ0=0;MQRankSum=-11.597;QD=161.61;ReadPosRankSum=-1.251;VQSLOD=3.7341;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,5292	0/0:8,0:8:21.03:0,21,641	0/0:30,0:30:77.93:0,78,2425	0/0:31,0:31:74.41:0,74,2408	0/0:28,0:28:74.54:0,75,3448	1/1:8,6:14:33.11:1765,33,0	1/1:22,3:26:66.21:4033,66,0	0/0:37,0:37:99:0,105,4348	0/0:29,0:29:81.23:0,81,3585	0/0:19,0:19:54.18:0,54,2099	0/0:19,0:19:48.15:0,48,2204	0/0:24,0:24:72.25:0,72,3374	0/0:20,0:20:54.14:0,54,2225	0/0:25,0:25:72.20:0,72,3253	0/0:35,0:35:99:0,105,4697	0/0:21,0:21:57.20:0,57,2729	0/0:42,0:42:99:0,117,5286	0/0:10,0:10:27.09:0,27,1318	0/0:27,0:27:72.25:0,72,3200	0/0:25,0:25:69.24:0,69,3276	0/0:60,0:60:99:0,169,7669	0/0:18,0:18:54.17:0,54,2324	0/0:19,0:19:51.17:0,51,2379	0/0:39,0:39:99:0,111,5331	1/1:11,9:20:54.19:3898,54,0	0/0:29,0:29:81.25:0,81,3610	0/0:24,0:23:69.24:0,69,2871	0/0:20,0:20:60.21:0,60,2719
chr10	105206834	.	CCTCTCTCT	C	1578.92	PASS	AB=0.861;AC=11;AF=0.204;AN=54;BaseQRankSum=6.223;DP=580;FS=0.000;HRun=0;HaplotypeScore=140.4585;InbreedingCoeff=0.5277;MQ=66.30;MQ0=7;MQRankSum=-6.985;QD=11.36;ReadPosRankSum=1.299;VQSLOD=2.5367;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:34:18.03:0,18,533	1/1:5,0:11:5.81:31,6,0	0/0:18,0:14:3.01:0,3,78	0/0:19,0:9:2.22:0,2,7	0/0:20,0:19:24.08:0,24,930	0/0:16,0:16:9.03:0,9,276	0/0:22,0:17:3.01:0,3,119	0/1:24,5:29:64.65:309,0,65	0/0:21,0:24:45.09:0,45,1323	0/0:18,0:18:24.97:0,25,760	0/0:17,0:17:24.07:0,24,802	0/0:20,0:22:36.12:0,36,1329	0/0:18,0:20:36.12:0,36,1119	0/0:10,0:11:21.06:0,21,764	0/0:29,0:29:57.20:0,57,2155	0/0:18,0:18:33.11:0,33,1286	0/0:22,0:28:46.04:0,46,1493	0/1:26,1:27:33.95:34,0,1266	1/1:12,6:16:12.04:270,12,0	1/1:5,7:13:21.07:512,21,0	0/1:16,7:23:67.87:70,0,68	0/0:19,0:18:30.08:0,30,879	0/0:21,0:21:39.13:0,39,1411	0/0:24,0:24:36.12:0,36,1340	./.	0/0:24,0:27:36.12:0,36,1262	1/1:8,9:18:20.92:512,21,0	0/0:16,0:17:24.05:0,24,704
chr10	105207765	.	A	AT	573.78	PASS	AB=0.949;AC=8;AF=0.143;AN=56;BaseQRankSum=3.887;DP=494;FS=0.741;HRun=10;HaplotypeScore=69.8574;InbreedingCoeff=0.7815;MQ=68.16;MQ0=4;MQRankSum=-2.572;QD=6.52;ReadPosRankSum=-1.503;VQSLOD=1.2584;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.80:0,55,445	0/0:13,0:13:29.96:0,30,246	0/1:31,0:13:8.62:9,0,29	0/1:12,0:6:0:0,0,0	0/0:29,0:28:55.09:0,55,571	1/1:13,11:24:24.24:442,24,0	1/1:3,2:5:8.24:71,8,0	0/0:31,0:31:44.86:0,45,369	0/0:19,0:19:30.38:0,30,247	0/0:18,0:18:46.75:0,47,373	0/0:16,0:16:44.91:0,45,366	0/0:13,0:13:14.90:0,15,123	0/0:9,0:9:14.93:0,15,123	0/0:12,0:12:29.94:0,30,243	0/0:15,0:15:29.92:0,30,246	0/0:16,0:16:36.41:0,36,297	0/0:13,0:13:32.95:0,33,271	0/0:20,0:20:56.93:0,57,468	0/0:23,0:23:14.39:0,14,273	0/0:24,1:25:34.26:0,34,485	0/0:13,0:13:26.93:0,27,221	0/0:17,0:17:35.92:0,36,296	0/0:21,0:22:23.98:0,24,393	0/0:12,0:12:20.90:0,21,168	1/1:10,4:14:19.60:191,20,0	0/0:13,0:14:31.98:0,32,252	0/0:17,0:17:34.94:0,35,276	0/0:17,0:17:38.93:0,39,320
chr10	105207775	.	T	TTAAAAA	683.13	PASS	AB=0.900;AC=5;AF=0.089;AN=56;BaseQRankSum=6.383;DP=506;FS=0.812;HRun=0;HaplotypeScore=111.6529;InbreedingCoeff=0.1577;MQ=68.23;MQ0=4;MQRankSum=-4.150;QD=7.35;ReadPosRankSum=-1.523;VQSLOD=2.0680;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:72.18:0,72,1502	0/0:11,0:11:30.10:0,30,665	0/1:29,0:10:15.69:16,0,140	0/1:16,0:8:7.76:8,0,43	0/0:30,0:29:90.08:0,90,1866	0/1:25,0:26:48.28:434,0,48	0/1:2,2:6:3.81:67,0,4	0/0:26,0:26:75.24:0,75,1445	0/0:20,0:20:50.76:0,51,973	0/0:20,0:20:56.99:0,57,1105	0/0:18,0:18:54.14:0,54,1078	0/0:13,0:13:39.13:0,39,732	0/0:7,0:7:21.07:0,21,451	0/0:12,0:12:36.09:0,36,716	0/0:16,0:16:45.14:0,45,1003	0/0:16,0:16:45.15:0,45,969	0/0:12,0:12:36.12:0,36,764	0/0:22,0:22:66.21:0,66,1442	0/0:20,0:20:33.54:0,34,995	0/0:30,0:30:87.14:0,87,1833	0/0:14,0:14:36.03:0,36,750	0/0:16,0:16:48.16:0,48,995	0/0:23,0:23:66.12:0,66,1353	0/0:10,0:10:30.10:0,30,620	0/1:14,1:15:2.35:272,0,2	0/0:16,0:16:39.12:0,39,869	0/0:20,0:19:54.11:0,54,1064	0/0:15,0:15:45.15:0,45,981
chr10	105207897	.	GAA	G	3875.62	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=9.746;DP=612;FS=7.152;HRun=12;HaplotypeScore=81.7777;InbreedingCoeff=0.8762;MQ=73.98;MQ0=1;MQRankSum=2.374;QD=19.00;ReadPosRankSum=1.632;VQSLOD=2.8419;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:35:92.72:0,93,1226	1/1:0,7:7:18.03:183,18,0	0/1:19,0:19:5.58:6,0,225	0/0:13,0:11:9.81:0,10,122	0/0:22,0:23:50.63:0,51,684	1/1:2,27:31:56.59:684,57,0	1/1:5,12:19:35.76:347,36,0	1/1:6,29:35:74.06:774,74,0	0/0:19,0:19:45.09:0,45,592	0/0:26,1:29:47.21:0,47,985	0/0:25,1:27:35.68:0,36,854	0/0:9,0:9:24.06:0,24,319	0/0:17,0:17:39.06:0,39,518	0/0:13,0:13:30.05:0,30,381	0/0:15,0:16:35.60:0,36,482	0/0:23,0:23:54.16:0,54,752	0/0:22,0:24:66.66:0,67,916	0/0:34,0:35:96.23:0,96,1293	1/1:5,12:18:4.09:321,4,0	1/1:3,20:23:47.83:540,48,0	1/1:3,13:18:20.51:318,21,0	0/0:12,1:13:2.59:0,3,417	0/0:26,0:28:65.70:0,66,932	0/0:30,0:30:90.29:0,90,1303	1/1:3,9:12:21.03:214,21,0	0/0:24,0:26:68.71:0,69,961	1/1:4,17:21:48.10:488,48,0	0/0:26,0:28:77.13:0,77,964
chr10	105208423	.	CT	C	4080.52	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.051;DP=543;FS=7.275;HRun=1;HaplotypeScore=64.6226;InbreedingCoeff=0.9974;MQ=86.13;MQ0=0;MQRankSum=-2.376;QD=36.43;ReadPosRankSum=-0.221;VQSLOD=3.6035;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,108,1831	1/1:0,15:15:39.13:545,39,0	0/0:20,0:20:49.53:0,50,749	0/0:28,0:28:71.16:0,71,1000	0/0:6,0:6:18.06:0,18,275	0/0:18,0:18:54.18:0,54,824	0/0:22,0:22:66.21:0,66,987	1/1:0,20:20:57.14:773,57,0	0/0:25,0:25:75.24:0,75,1126	0/0:13,0:13:39.09:0,39,555	0/0:9,0:9:24.07:0,24,344	0/0:25,0:25:75.23:0,75,1093	0/0:25,0:25:75.25:0,75,1115	0/0:17,0:17:51.17:0,51,778	0/0:25,0:25:75.24:0,75,1127	0/0:21,0:21:63.14:0,63,866	0/0:32,0:32:96.23:0,96,1352	0/0:22,0:22:63.13:0,63,888	1/1:0,22:22:66.20:889,66,0	1/1:0,13:13:36.12:503,36,0	1/1:3,16:19:57.15:745,57,0	0/0:13,0:13:36.12:0,36,540	0/0:11,0:11:27.09:0,27,413	0/0:18,0:17:51.16:0,51,758	0/0:9,0:9:27.08:0,27,392	0/0:18,0:18:51.12:0,51,716	1/1:0,23:23:45.15:626,45,0	0/0:11,0:11:33.09:0,33,482
chr10	105208540	.	C	CT	4493.02	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-10.547;DP=659;FS=0.000;HRun=1;HaplotypeScore=67.6560;InbreedingCoeff=0.9985;MQ=96.13;MQ0=0;MQRankSum=-3.570;QD=38.08;ReadPosRankSum=-1.068;VQSLOD=4.8798;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,156,2015	1/1:0,10:10:24.08:360,24,0	0/0:36,0:36:95.08:0,95,1156	0/0:35,0:35:96.26:0,96,1205	0/0:13,0:13:33.11:0,33,427	0/0:14,0:14:42.14:0,42,545	0/0:28,0:28:78.25:0,78,1012	1/1:1,22:23:66.21:967,66,0	0/0:21,0:21:63.20:0,63,817	0/0:17,0:17:51.17:0,51,662	0/0:10,0:10:27.09:0,27,350	0/0:33,0:33:99:0,99,1253	0/0:24,0:24:72.23:0,72,935	0/0:15,0:15:42.12:0,42,531	0/0:30,0:30:87.27:0,87,1113	0/0:26,0:26:78.25:0,78,1009	0/0:41,0:41:99:0,123,1552	0/0:16,0:16:45.13:0,45,568	1/1:2,11:13:39.13:584,39,0	1/1:0,7:7:21.07:315,21,0	1/1:1,31:32:63.17:919,63,0	0/0:18,0:18:54.18:0,54,700	0/0:16,0:16:42.14:0,42,545	0/0:26,0:26:78.25:0,78,1011	0/0:20,0:20:60.20:0,60,779	0/0:32,0:32:81.26:0,81,1051	1/1:1,32:33:90.30:1349,90,0	0/0:15,0:15:45.15:0,45,584
chr10	105209795	.	A	AG	9212.28	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-15.827;DP=660;FS=17.036;HRun=0;HaplotypeScore=62.6503;InbreedingCoeff=0.9993;MQ=93.68;MQ0=0;MQRankSum=-5.736;QD=43.45;ReadPosRankSum=-1.633;VQSLOD=2.7179;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.26:0,87,1194	1/1:0,8:8:21.07:336,21,0	0/0:26,0:26:56.87:0,57,936	0/0:32,0:32:72.97:0,73,1098	0/0:29,0:29:87.28:0,87,1199	1/1:0,19:19:54.18:863,54,0	1/1:0,20:20:57.19:911,57,0	1/1:0,32:32:96.31:1506,96,0	0/0:25,0:25:75.22:0,75,1012	0/0:31,0:31:93.31:0,93,1298	0/0:14,0:14:42.14:0,42,586	0/0:31,0:31:93.31:0,93,1301	0/0:20,0:20:60.20:0,60,839	0/0:18,0:18:51.17:0,51,713	0/0:21,0:21:63.21:0,63,881	0/0:20,0:20:60.19:0,60,823	0/0:29,0:29:84.25:0,84,1153	0/0:19,0:19:54.18:0,54,755	1/1:2,28:30:87.27:1360,87,0	1/1:1,22:24:63.21:974,63,0	1/1:1,33:34:93.32:1487,93,0	0/0:16,0:16:45.12:0,45,610	0/0:23,0:23:66.22:0,66,923	0/0:20,0:20:60.20:0,60,839	1/1:0,24:23:60.20:959,60,0	0/0:32,0:32:96.32:0,96,1342	1/1:0,21:21:51.17:815,51,0	0/0:13,0:13:39.13:0,39,545
chr10	105210943	.	GC	G	11229.62	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=17.944;DP=869;FS=3.726;HRun=2;HaplotypeScore=98.9230;InbreedingCoeff=0.9997;MQ=90.82;MQ0=0;MQRankSum=0.083;QD=37.31;ReadPosRankSum=0.593;VQSLOD=5.0209;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1709	1/1:0,12:12:36.12:467,36,0	0/0:33,0:33:93.31:0,93,1366	0/0:41,0:40:99:0,105,1447	0/0:24,0:24:69.23:0,69,1014	1/1:1,30:31:87.28:1130,87,0	1/1:0,30:30:87.28:1130,87,0	1/1:0,45:45:99:1725,135,0	0/0:36,0:36:99:0,105,1532	0/0:44,0:44:99:0,129,1915	0/0:22,0:22:60.18:0,60,898	0/0:39,0:39:99:0,117,1732	0/0:16,0:16:48.16:0,48,719	0/0:29,0:29:87.29:0,87,1284	0/0:42,0:42:99:0,126,1868	0/0:27,0:27:81.26:0,81,1192	0/0:42,0:42:99:0,126,1821	0/0:17,0:17:48.12:0,48,695	1/1:0,20:20:60.20:779,60,0	1/1:0,27:27:78.25:1013,78,0	1/1:0,69:69:99:2610,202,0	0/0:25,0:25:72.24:0,72,1061	0/0:25,0:25:75.25:0,75,1123	0/0:37,0:37:99:0,108,1618	1/1:1,32:33:93.30:1208,93,0	0/0:22,0:22:63.20:0,63,926	1/1:1,33:34:89.94:1168,90,0	0/0:8,0:8:24.08:0,24,360
chr10	105211487	.	G	GCA	4168.03	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.254;DP=643;FS=0.000;HRun=0;HaplotypeScore=83.4219;InbreedingCoeff=0.9550;MQ=59.12;MQ0=7;MQRankSum=0.277;QD=30.87;ReadPosRankSum=-1.361;VQSLOD=4.9776;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:83.33:0,83,1228	1/1:2,5:7:15.05:246,15,0	0/0:26,0:9:11.94:0,12,98	0/0:21,0:6:3.01:0,3,37	0/0:21,0:21:54.13:0,54,652	0/0:21,0:21:51.14:0,51,619	0/0:28,0:28:63.20:0,63,779	1/1:13,29:42:53.02:1231,53,0	0/0:34,0:34:87.27:0,87,1078	0/0:20,0:20:57.10:0,57,673	0/0:11,0:11:30.08:0,30,358	0/0:26,0:26:78.20:0,78,949	0/0:26,0:26:75.22:0,75,917	0/0:15,0:15:45.13:0,45,545	0/0:30,0:30:81.21:0,81,964	0/0:25,0:25:57.14:0,57,689	0/0:36,0:36:87.20:0,87,1059	0/0:13,0:13:27.08:0,27,335	1/1:4,12:16:30.10:492,30,0	1/1:2,10:13:24.08:393,24,0	1/1:6,24:31:46.04:921,46,0	0/0:15,0:15:42.13:0,42,520	0/0:13,0:13:30.08:0,30,358	0/0:25,0:25:51.16:0,51,631	0/0:15,0:15:36.10:0,36,434	0/0:31,0:31:90.21:0,90,1071	1/1:2,24:26:54.18:885,54,0	0/0:11,0:12:32.94:0,33,386
chr10	105211757	.	CCTCCACCAT	C	202.83	PASS	AB=0.979;AC=12;AF=0.286;AN=42;BaseQRankSum=2.436;DP=314;FS=7.783;HRun=0;HaplotypeScore=43.2160;InbreedingCoeff=-0.4532;MQ=27.34;MQ0=107;MQRankSum=-0.782;QD=0.93;ReadPosRankSum=-0.593;VQSLOD=0.2183;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:2:3.01:0,3,35	./.	./.	./.	./.	0/1:15,0:6:18.98:19,0,33	0/1:31,0:9:41.76:81,0,42	0/0:10,0:5:6.61:0,7,89	0/1:19,0:13:13.08:13,0,257	0/1:8,4:9:61.50:61,0,268	0/0:3,0:2:1.89:0,2,34	0/1:17,0:7:5.93:6,0,129	0/1:11,0:6:41.85:42,0,70	0/1:15,0:9:25.03:25,0,47	0/1:11,0:4:2.95:3,0,141	0/1:8,0:5:19.98:20,0,42	0/0:3,0:2:3.01:0,3,49	0/0:10,0:7:15.91:0,16,301	0/0:7,0:3:5.98:0,6,47	0/0:8,0:5:11.52:0,12,108	0/1:56,0:17:9.14:15,0,9	./.	./.	0/1:14,0:9:22.10:22,0,152	./.	0/1:9,0:7:15.81:16,0,266	0/0:1,0:1:2.50:0,2,9	0/0:5,0:4:1.52:0,2,46
chr10	105211805	.	TCAC	T	142.51	PASS	AB=1.000;AC=9;AF=0.237;AN=38;BaseQRankSum=3.525;DP=506;FS=2.292;HRun=0;HaplotypeScore=32.9927;InbreedingCoeff=0.5079;MQ=20.10;MQ0=218;MQRankSum=-1.829;QD=1.88;ReadPosRankSum=0.580;VQSLOD=1.2400;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:4:6.02:0,6,70	./.	./.	./.	./.	1/1:20,0:4:2.90:16,3,0	1/1:33,1:8:12.04:138,12,0	./.	0/0:15,0:11:7.82:0,8,81	0/0:27,0:4:11.83:0,12,141	./.	0/0:18,0:8:2.28:0,2,70	0/0:16,0:11:17.74:0,18,252	0/0:25,0:10:8.97:0,9,92	0/0:15,0:4:7.27:0,7,57	0/0:23,0:9:5.98:0,6,86	0/0:9,0:4:3.01:0,3,46	./.	./.	1/1:6,1:3:6.01:65,6,0	0/0:78,4:9:2.96:0,3,19	0/0:16,0:7:4.19:0,4,23	0/1:8,0:3:0:0,0,0	0/0:31,0:11:11.73:0,12,175	./.	0/0:21,0:12:29.04:0,29,363	1/1:4,2:3:2.78:38,3,0	0/0:8,0:3:6.02:0,6,79
chr10	105211931	.	TCAC	T	70.55	PASS	AB=0.956;AC=6;AF=0.115;AN=52;BaseQRankSum=4.256;DP=668;FS=1.928;HRun=0;HaplotypeScore=69.4398;InbreedingCoeff=0.0818;MQ=33.08;MQ0=214;MQRankSum=-2.471;QD=0.64;ReadPosRankSum=-1.659;VQSLOD=1.5159;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:18:33.57:0,34,650	0/0:6,0:4:2.88:0,3,15	./.	./.	0/0:13,0:11:21.87:0,22,377	0/1:15,3:7:46.36:83,0,46	0/0:46,0:19:8.99:0,9,118	0/1:37,0:11:16.35:16,0,48	0/0:30,0:16:30.08:0,30,511	0/0:37,0:16:36.49:0,36,641	0/0:14,0:10:27.08:0,27,492	0/0:27,0:14:27.05:0,27,444	0/0:24,0:18:22.25:0,22,338	0/0:31,0:18:45.06:0,45,786	0/0:13,1:8:14.81:0,15,209	0/0:24,0:17:24.47:0,24,507	0/0:33,0:23:54.17:0,54,1007	0/0:21,0:15:39.10:0,39,743	0/1:30,1:7:34.05:34,0,134	0/0:13,0:8:3.01:0,3,35	0/0:73,0:29:7.27:0,7,114	0/0:8,0:3:9.03:0,9,168	0/0:12,0:8:18.04:0,18,344	0/0:52,0:33:60.20:0,60,1175	1/1:18,0:2:3:25,3,0	0/0:28,0:13:33.04:0,33,630	0/1:7,0:5:28.27:28,0,65	0/0:16,0:13:39.13:0,39,738
chr10	105211940	.	CCATCACCACCAT	C	491.60	PASS	AB=0.967;AC=10;AF=0.179;AN=56;BaseQRankSum=5.139;DP=641;FS=1.009;HRun=0;HaplotypeScore=119.3327;InbreedingCoeff=0.0882;MQ=34.42;MQ0=186;MQRankSum=-3.188;QD=3.00;ReadPosRankSum=-2.462;VQSLOD=2.0210;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:19:42.05:0,42,960	1/1:5,0:4:0.47:1,0,0	0/0:2,0:1:2.98:0,3,22	0/0:7,0:1:3.01:0,3,47	0/0:13,0:11:22.52:0,23,550	0/1:19,0:9:33.54:142,0,34	0/1:38,0:18:42.81:43,0,160	0/1:28,9:12:16.18:162,0,16	0/0:33,0:19:38.07:0,38,835	0/0:31,0:14:20.86:0,21,605	0/0:15,0:10:27.09:0,27,815	0/0:24,0:13:27.44:0,27,596	0/0:20,0:15:19.27:0,19,425	0/0:33,0:20:47.51:0,48,1240	0/0:12,0:7:18:0,18,383	0/0:25,0:18:29.99:0,30,573	0/0:36,0:25:63.17:0,63,1809	0/0:24,0:19:47.70:0,48,1216	0/1:30,0:9:99:145,0,154	0/1:9,0:5:8.36:8,0,30	0/0:70,0:30:7.85:0,8,55	0/0:9,0:4:12:0,12,226	0/0:9,0:6:15.03:0,15,258	0/0:47,0:31:60.41:0,60,1551	1/1:17,0:3:6.01:75,6,0	0/0:22,0:12:30.07:0,30,724	0/1:9,0:7:47.24:47,0,76	0/0:17,0:13:39.13:0,39,920
chr10	105211978	.	ATCG	A	186.41	PASS	AB=0.728;AC=6;AF=0.107;AN=56;BaseQRankSum=6.374;DP=486;FS=3.854;HRun=0;HaplotypeScore=87.6788;InbreedingCoeff=0.4559;MQ=50.59;MQ0=24;MQRankSum=-6.571;QD=9.81;ReadPosRankSum=-0.638;VQSLOD=3.0106;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:78.26:0,78,1569	1/1:3,0:3:2.90:16,3,0	0/0:19,0:10:25.92:0,26,424	0/0:19,1:13:30.06:0,30,427	0/0:11,0:11:33.11:0,33,676	0/0:16,0:16:35.06:0,35,514	0/0:30,0:24:25.30:0,25,690	0/0:7,0:6:14.93:0,15,174	0/0:25,0:19:47.96:0,48,1044	0/0:21,0:21:55.57:0,56,1090	0/0:12,0:12:33.11:0,33,758	0/0:15,0:14:33.01:0,33,709	0/0:20,0:17:48.15:0,48,973	0/0:23,0:19:45.02:0,45,946	0/0:13,0:11:33.09:0,33,640	0/0:15,0:15:29.70:0,30,574	0/0:38,0:34:96.33:0,96,1981	0/0:24,0:23:63.49:0,63,1294	0/1:8,1:8:85.09:106,0,85	1/1:1,1:1:3.01:51,3,0	0/0:23,2:16:1.06:0,1,13	0/0:11,0:9:21.07:0,21,408	0/0:8,0:8:24.08:0,24,389	0/0:35,0:29:61.35:0,61,1437	0/0:8,0:8:17.84:0,18,311	0/0:21,0:19:57.19:0,57,1023	0/1:1,4:5:5.61:125,0,6	0/0:14,0:14:39.13:0,39,897
chr10	105211985	.	CTAT	C	210.28	PASS	AB=0.944;AC=9;AF=0.167;AN=54;BaseQRankSum=5.804;DP=457;FS=1.177;HRun=0;HaplotypeScore=87.6099;InbreedingCoeff=0.7674;MQ=54.33;MQ0=6;MQRankSum=-5.814;QD=7.51;ReadPosRankSum=1.004;VQSLOD=2.8825;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:96.22:0,96,2237	1/1:2,0:2:2.92:17,3,0	0/0:17,0:10:29.31:0,29,558	0/0:18,1:14:39.08:0,39,843	0/0:10,0:10:30.10:0,30,735	0/0:13,0:14:36.12:0,36,849	0/0:28,0:24:36.37:0,36,1094	./.	0/0:24,0:19:47.75:0,48,1095	0/0:23,0:23:36.80:0,37,1442	0/0:11,0:11:33.11:0,33,813	0/0:21,0:20:27.77:0,28,992	0/0:21,0:20:60.15:0,60,1396	0/0:20,0:19:48.16:0,48,1142	0/0:11,0:11:33.11:0,33,788	0/0:15,0:14:32.96:0,33,764	0/0:36,1:34:99:0,102,2389	0/0:23,0:23:61.50:0,61,1462	1/1:2,1:3:9.03:126,9,0	1/1:2,0:1:3.01:54,3,0	0/1:16,1:14:5.09:10,0,5	0/0:11,0:10:23.91:0,24,531	0/0:8,0:8:24.08:0,24,591	0/0:33,0:30:75.17:0,75,1719	0/0:8,0:8:17.65:0,18,438	0/0:22,0:21:63.22:0,63,1550	1/1:1,3:4:9.03:138,9,0	0/0:14,0:14:36.12:0,36,887
chr10	105211999	.	ATCACCACCG	A	556.63	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.370;DP=469;FS=18.573;HRun=0;HaplotypeScore=139.2352;InbreedingCoeff=0.8667;MQ=60.44;MQ0=3;MQRankSum=-6.283;QD=16.37;ReadPosRankSum=-0.023;VQSLOD=1.4007;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:99:0,117,4997	1/1:4,0:4:8.94:111,9,0	0/0:16,0:15:45.10:0,45,1399	0/0:18,0:16:48.08:0,48,1479	0/0:11,0:11:33.11:0,33,1548	0/0:12,0:12:30.99:0,31,1094	0/0:27,0:23:48.12:0,48,1825	1/1:3,0:2:5.55:29,6,0	0/0:23,0:20:51.65:0,52,2182	0/0:23,0:23:66.23:0,66,3052	0/0:12,0:12:36.12:0,36,1569	0/0:25,0:24:58.44:0,58,2306	0/0:18,0:17:51.13:0,51,2438	0/0:22,0:21:56.77:0,57,2385	0/0:12,0:12:36.12:0,36,1694	0/0:13,0:12:32.68:0,33,1552	0/0:34,0:31:93.32:0,93,4336	0/0:25,0:25:69.71:0,70,2942	1/1:2,1:3:9.03:256,9,0	1/1:3,0:2:3.01:53,3,0	1/1:16,1:16:9.24:54,9,0	0/0:13,0:12:30.10:0,30,1386	0/0:10,0:10:30.10:0,30,1338	0/0:32,0:29:72.25:0,72,3369	0/0:8,0:8:6.09:0,6,755	0/0:22,0:21:63.22:0,63,3118	1/1:1,3:4:9.03:213,9,0	0/0:16,0:16:48.13:0,48,1980
chr10	105212005	.	ACCG	A	466.26	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=6.113;DP=475;FS=18.488;HRun=0;HaplotypeScore=91.0123;InbreedingCoeff=0.8158;MQ=63.09;MQ0=1;MQRankSum=-6.530;QD=10.14;ReadPosRankSum=-2.153;VQSLOD=1.4934;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:99:0,126,2627	1/1:3,1:4:8.91:71,9,0	0/0:18,0:17:48.15:0,48,902	0/0:19,0:17:42.06:0,42,762	0/0:12,0:12:33.11:0,33,734	0/0:11,0:11:27.98:0,28,384	0/0:23,0:20:46.97:0,47,635	1/1:2,0:2:5.93:49,6,0	0/0:21,0:18:48.64:0,49,1082	0/0:23,0:23:66.23:0,66,1469	0/0:10,0:10:30.07:0,30,634	0/0:26,0:25:54.15:0,54,1137	0/0:17,0:16:48.16:0,48,1102	0/0:22,0:21:54.05:0,54,1184	0/0:11,0:11:33.11:0,33,747	0/0:15,0:14:32.80:0,33,709	0/0:36,0:33:90.29:0,90,1994	0/0:24,0:24:66:0,66,1402	1/1:2,2:4:11.91:163,12,0	1/1:1,3:3:3.01:51,3,0	1/1:10,4:13:8.83:54,9,0	0/0:15,0:14:33.08:0,33,637	0/0:10,0:10:30.10:0,30,657	0/0:32,0:30:72.25:0,72,1614	0/1:9,0:9:9.90:10,0,251	0/0:22,0:21:63.22:0,63,1446	1/1:8,1:8:22.94:238,23,0	0/0:15,0:15:45.15:0,45,1019
chr10	105212008	.	G	GTGGCCA	1506.56	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=4.038;DP=463;FS=24.519;HRun=0;HaplotypeScore=122.7083;InbreedingCoeff=0.8386;MQ=65.16;MQ0=0;MQRankSum=-6.405;QD=29.54;ReadPosRankSum=-2.790;VQSLOD=1.4447;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,3013	1/1:1,3:7:9.02:239,9,0	0/0:19,0:18:51.06:0,51,1087	0/0:18,0:17:48.04:0,48,942	0/0:12,0:12:36.11:0,36,857	0/0:11,0:11:30.10:0,30,488	0/0:21,0:20:26.97:0,27,727	1/1:1,2:5:12.04:405,12,0	0/0:18,0:18:54.17:0,54,1250	0/0:22,0:22:66.22:0,66,1612	0/0:10,0:10:27.09:0,27,687	0/0:22,0:22:54.18:0,54,1356	0/0:18,0:17:48.16:0,48,1228	0/0:22,0:22:57.18:0,57,1353	0/0:12,0:12:33.11:0,33,834	0/0:14,0:13:33.11:0,33,834	0/0:34,0:33:96.27:0,96,2323	0/0:23,0:23:63.18:0,63,1547	1/1:6,0:6:15.04:389,15,0	1/1:3,0:3:3.01:59,3,0	1/1:12,0:12:9.81:116,10,0	0/0:14,0:13:30.09:0,30,701	0/0:10,0:10:30.09:0,30,715	0/0:29,0:28:72.25:0,72,1788	0/1:9,0:9:9.90:10,0,302	0/0:23,0:22:66.18:0,66,1622	1/1:9,0:8:24.01:463,24,0	0/0:15,0:15:45.15:0,45,1151
chr10	105213245	.	AAAAC	A	1987.44	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.999;DP=797;FS=0.000;HRun=0;HaplotypeScore=143.7094;InbreedingCoeff=0.9657;MQ=55.75;MQ0=30;MQRankSum=0.616;QD=23.66;ReadPosRankSum=0.558;VQSLOD=3.3886;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:99:0,105,2482	0/0:17,0:17:36.05:0,36,346	0/0:16,0:9:24.08:0,24,538	0/0:12,0:6:7.11:0,7,210	0/0:28,0:26:45.15:0,45,1098	1/1:5,22:27:57.19:934,57,0	1/1:18,15:27:34.31:557,34,0	0/0:46,0:32:54.06:0,54,551	0/0:30,0:30:57.20:0,57,1347	0/0:43,0:41:84.26:0,84,1954	0/0:22,0:22:51.18:0,51,1244	0/0:35,0:35:75.26:0,75,1795	0/0:26,0:26:54.19:0,54,1287	0/0:28,0:28:48.16:0,48,1133	0/0:21,0:21:45.15:0,45,1063	0/0:27,0:27:57.18:0,57,1309	0/0:36,0:36:72.24:0,72,1676	0/0:25,0:25:63.22:0,63,1482	0/0:29,0:27:45.07:0,45,432	0/0:27,0:26:60.10:0,60,593	0/0:34,0:33:54.05:0,54,514	0/0:36,1:35:17.07:0,17,1488	0/0:24,0:21:48.16:0,48,1147	0/0:34,0:34:62.70:0,63,1536	1/1:5,19:24:39.13:639,39,0	0/0:30,0:29:69.20:0,69,1594	0/0:30,0:30:57.09:0,57,552	0/0:11,0:11:27.01:0,27,469
chr10	105213265	.	CA	C	4745.26	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.224;DP=751;FS=0.735;HRun=3;HaplotypeScore=95.2820;InbreedingCoeff=0.9121;MQ=65.29;MQ0=13;MQRankSum=0.371;QD=30.03;ReadPosRankSum=0.211;VQSLOD=4.1955;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,1757	1/1:0,18:18:48.15:589,48,0	0/0:27,0:26:78.25:0,78,1026	0/0:9,0:8:19.30:0,19,284	0/0:31,0:30:84.28:0,84,1181	0/0:27,0:27:0.29:0,0,104	0/0:24,0:21:18.92:0,19,263	1/1:5,32:33:53.09:1097,53,0	0/0:25,0:25:75.24:0,75,1043	0/0:40,0:39:99:0,111,1562	0/0:24,0:24:69.23:0,69,983	0/0:31,0:31:90.29:0,90,1264	0/0:25,0:25:72.24:0,72,1021	0/0:26,0:26:69.17:0,69,940	0/0:20,0:20:54.14:0,54,742	0/0:27,0:27:75.18:0,75,1003	0/0:40,0:40:99:0,111,1545	0/0:26,0:26:78.25:0,78,1091	1/1:3,21:22:63.18:761,63,0	1/1:2,27:29:39.45:887,39,0	1/1:6,17:22:15.41:593,15,0	0/0:32,0:31:77.80:0,78,1109	0/0:18,0:18:51.17:0,51,731	0/0:27,0:27:75.25:0,75,1075	0/0:22,0:22:3.02:0,3,79	0/0:35,0:35:99:0,105,1467	1/1:2,25:27:66.21:818,66,0	0/0:13,0:13:39.12:0,39,520
chr10	105213608	.	ATCC	A	2012.44	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.905;DP=608;FS=2.719;HRun=0;HaplotypeScore=89.0081;InbreedingCoeff=0.9958;MQ=83.47;MQ0=0;MQRankSum=-2.817;QD=39.46;ReadPosRankSum=1.145;VQSLOD=4.6370;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.30:0,93,2034	0/0:13,0:13:36.12:0,36,786	0/0:22,0:22:63.22:0,63,1300	0/0:18,0:18:16.63:0,17,763	0/0:28,0:28:84.29:0,84,1857	1/1:1,14:15:42.14:686,42,0	1/1:5,17:22:48.16:783,48,0	0/0:23,0:23:66.23:0,66,1475	0/0:17,0:17:48.16:0,48,1070	0/0:37,0:37:99:0,105,2346	0/0:17,0:17:48.16:0,48,1070	0/0:20,0:20:60.21:0,60,1340	0/0:24,0:24:69.24:0,69,1518	0/0:18,0:18:54.19:0,54,1183	0/0:26,0:26:75.26:0,75,1676	0/0:18,0:18:54.19:0,54,1167	0/0:40,0:39:99:0,114,2540	0/0:15,0:15:45.15:0,45,998	0/0:16,0:16:45.11:0,45,911	0/0:14,0:14:36.12:0,36,790	0/0:34,0:34:99:0,99,2189	0/0:22,0:22:63.22:0,63,1390	0/0:15,0:15:45.14:0,45,940	0/0:33,0:33:93.28:0,93,1992	1/1:0,14:14:42.14:686,42,0	0/0:20,0:20:60.21:0,60,1325	0/0:24,0:24:69.24:0,69,1534	0/0:11,0:11:33.11:0,33,737
chr10	105213814	.	TG	T	325.94	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=6.556;DP=484;FS=7.505;HRun=6;HaplotypeScore=52.5904;InbreedingCoeff=0.6916;MQ=77.34;MQ0=0;MQRankSum=-1.202;QD=5.17;ReadPosRankSum=-1.248;VQSLOD=-0.5871;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:90.24:0,90,1118	1/1:7,0:7:0.71:2,1,0	0/0:17,0:17:21.07:0,21,396	0/0:16,0:15:34.05:0,34,323	0/0:15,0:15:39.12:0,39,498	1/1:13,0:13:6.01:58,6,0	1/1:24,0:24:3:32,3,0	0/0:9,0:9:2.98:0,3,26	0/0:13,0:13:39.13:0,39,508	0/0:23,0:23:51.15:0,51,641	0/0:10,0:10:21.07:0,21,273	0/0:26,0:26:63.18:0,63,788	0/0:27,0:27:78.24:0,78,1008	0/0:26,0:26:60.17:0,60,755	0/0:24,0:24:60.19:0,60,775	0/0:17,0:17:51.13:0,51,628	0/0:28,0:28:78.25:0,78,1021	0/0:17,0:17:45.13:0,45,574	1/1:6,0:6:2.79:8,3,0	./.	0/0:12,0:12:0.21:0,0,19	0/0:15,0:15:30.07:0,30,364	0/0:10,0:10:18.05:0,18,221	0/0:25,0:25:75.24:0,75,981	1/1:4,9:13:36.01:354,36,0	0/0:17,0:17:36.10:0,36,448	0/0:20,0:20:2.99:0,3,24	0/0:9,0:9:27.08:0,27,341
chr10	105213819	.	GGA	G	468.31	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=7.892;DP=460;FS=5.486;HRun=0;HaplotypeScore=58.2013;InbreedingCoeff=0.8521;MQ=75.93;MQ0=0;MQRankSum=-3.316;QD=5.71;ReadPosRankSum=-5.087;VQSLOD=0.2004;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:74.08:0,74,1303	1/1:1,6:7:5.98:64,6,0	0/0:16,0:16:35.19:0,35,529	0/0:15,0:14:21.34:0,21,371	0/0:13,0:13:36.99:0,37,540	0/1:14,0:14:0.31:1,0,0	0/0:22,0:22:0.32:0,0,0	1/1:7,0:7:6.41:44,6,0	0/0:13,0:13:39.12:0,39,589	0/0:20,0:20:54.15:0,54,836	0/0:8,0:8:21.02:0,21,295	0/0:24,0:24:43.16:0,43,878	0/0:28,0:28:81.22:0,81,1235	0/0:25,0:25:72.12:0,72,1007	0/0:26,0:26:75.15:0,75,1051	0/0:18,0:18:54.17:0,54,830	0/0:27,0:27:81.04:0,81,1125	0/0:16,0:16:48.10:0,48,724	1/1:5,3:8:23.78:208,24,0	1/1:8,0:8:5.84:35,6,0	1/1:6,0:6:8.68:63,9,0	0/0:13,0:13:27.05:0,27,379	0/0:10,0:10:24.94:0,25,317	0/0:27,0:27:81.06:0,81,1062	1/1:13,0:13:33.50:190,34,0	0/0:13,0:13:29.15:0,29,485	1/1:19,0:19:5.91:38,6,0	0/0:9,0:9:27.09:0,27,437
chr10	105214075	.	CAA	C	1708.01	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=8.933;DP=484;FS=6.978;HRun=11;HaplotypeScore=76.4537;InbreedingCoeff=0.9050;MQ=52.59;MQ0=12;MQRankSum=-10.093;QD=18.77;ReadPosRankSum=0.452;VQSLOD=2.6170;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:28:68.63:0,69,955	1/1:0,5:5:15.04:160,15,0	./.	0/0:11,0:2:1.25:0,1,3	0/0:18,0:18:40.82:0,41,561	0/0:4,1:19:0.76:0,1,69	0/0:1,0:14:19.49:0,19,76	1/1:8,9:17:27.04:287,27,0	0/0:27,0:28:65.40:0,65,861	0/0:13,0:13:30.09:0,30,436	0/0:8,0:8:24.08:0,24,369	0/0:16,0:18:32.59:0,33,451	0/0:10,0:11:21.05:0,21,285	0/0:13,0:15:35.60:0,36,493	0/0:21,0:25:58.29:0,58,741	0/0:19,0:22:62.09:0,62,838	0/0:28,0:32:72.24:0,72,1089	0/0:23,0:27:71.08:0,71,914	1/1:8,9:13:27.06:287,27,0	1/1:3,14:17:24.01:255,24,0	1/1:4,3:6:15:142,15,0	0/0:12,0:13:23.56:0,24,292	0/0:20,0:20:40.83:0,41,559	0/0:22,0:22:57.19:0,57,877	0/0:2,0:16:24.95:0,25,86	0/0:20,0:20:45.15:0,45,679	1/1:6,21:28:66.28:757,66,0	0/0:7,0:6:12.04:0,12,185
chr10	105214100	.	GAAAAAGA	G	4899.71	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=11.657;DP=558;FS=14.866;HRun=0;HaplotypeScore=132.1312;InbreedingCoeff=0.9228;MQ=61.37;MQ0=12;MQRankSum=-8.522;QD=35.76;ReadPosRankSum=-1.558;VQSLOD=3.6373;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.26:0,78,2498	1/1:3,6:9:20.99:366,21,0	0/1:21,0:10:3.19:3,0,219	0/0:25,0:11:25.47:0,25,318	0/0:21,0:21:58.08:0,58,1632	0/0:16,0:16:45.13:0,45,1469	0/0:11,0:11:27.09:0,27,940	1/1:6,28:34:90.14:1463,90,0	0/0:29,0:28:75.25:0,75,2286	0/0:19,0:19:57.19:0,57,1670	0/0:15,0:15:42.14:0,42,1147	0/0:14,0:14:30.10:0,30,980	0/0:14,0:14:36.12:0,36,1174	0/0:18,0:18:48.16:0,48,1553	0/0:20,0:20:51.17:0,51,1747	0/0:22,0:22:54.17:0,54,1703	0/0:36,0:36:99:0,99,3049	0/0:31,0:30:72.23:0,72,2261	1/1:5,12:16:36.08:610,36,0	1/1:5,15:20:36.02:749,36,0	1/1:0,5:5:12.04:285,12,0	0/0:10,0:10:24.08:0,24,696	0/0:18,0:18:54.15:0,54,1498	0/0:21,0:21:51.15:0,51,1642	0/0:20,0:20:51.17:0,51,1444	0/0:21,0:21:57.15:0,57,1773	1/1:7,24:31:66.07:1423,66,0	0/0:9,0:9:27.09:0,27,933
chr10	105214360	.	ACACC	A	552.46	PASS	AB=0.992;AC=10;AF=0.179;AN=56;BaseQRankSum=0.734;DP=709;FS=2.193;HRun=0;HaplotypeScore=101.1312;InbreedingCoeff=0.4756;MQ=52.65;MQ0=41;MQRankSum=-4.310;QD=2.78;ReadPosRankSum=-3.171;VQSLOD=1.2548;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:39:81.29:0,81,1470	0/1:13,0:13:63.06:63,0,149	0/1:52,0:9:0.98:1,0,151	0/1:57,0:13:3.71:4,0,91	0/0:17,0:17:24.86:0,25,670	0/0:19,0:17:35.93:0,36,481	0/0:33,0:32:57.67:0,58,802	1/1:25,0:24:26.41:406,26,0	0/0:19,0:19:54.07:0,54,763	0/0:14,0:13:35.91:0,36,539	0/0:13,0:13:24.04:0,24,386	0/0:26,0:26:74.86:0,75,1275	0/0:21,0:20:30.16:0,30,755	0/0:18,0:17:47.65:0,48,805	0/0:18,0:18:49.34:0,49,840	0/0:17,0:16:42.05:0,42,579	0/0:49,0:48:99:0,114,2240	0/0:19,0:18:51.14:0,51,1093	0/1:12,0:11:21.39:123,0,21	1/1:20,2:21:1.41:2,1,0	0/0:54,1:51:8.63:0,9,120	0/0:7,0:7:15.03:0,15,256	0/0:16,0:15:31.62:0,32,436	0/0:42,0:39:81.01:0,81,1404	0/0:17,0:17:50.87:0,51,614	0/0:29,0:28:80.33:0,80,1313	1/1:15,1:16:11.49:89,11,0	0/0:20,0:20:53.90:0,54,933
chr10	105214364	.	CCA	C	436.03	PASS	AB=0.921;AC=15;AF=0.278;AN=54;BaseQRankSum=5.777;DP=722;FS=0.000;HRun=0;HaplotypeScore=82.2425;InbreedingCoeff=-0.1698;MQ=52.19;MQ0=43;MQRankSum=0.655;QD=1.14;ReadPosRankSum=-0.318;VQSLOD=1.3796;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,8:42:17.51:0,18,643	0/0:8,0:11:17.39:0,17,172	./.	0/0:59,0:11:3:0,3,27	0/0:17,0:17:14.10:0,14,272	0/0:12,0:18:15.02:0,15,170	0/1:17,1:31:3.80:4,0,236	0/1:28,0:27:29.16:29,0,79	0/0:21,0:20:30.10:0,30,446	0/1:15,1:15:15.64:16,0,164	0/0:6,0:10:12.01:0,12,124	0/1:26,1:27:21.78:22,0,530	0/0:19,0:19:15.86:0,16,365	0/1:16,2:17:37.20:37,0,329	0/0:18,0:18:27.09:0,27,410	0/1:13,2:14:52.24:52,0,122	0/1:41,8:48:47.31:47,0,972	0/0:21,0:20:39.13:0,39,586	0/1:13,0:12:26.45:26,0,38	1/1:22,0:21:11.90:83,12,0	0/1:54,0:50:8.90:9,0,103	0/0:9,0:8:10.25:0,10,114	0/1:12,6:17:52.33:52,0,116	0/1:34,8:40:7.09:7,0,747	0/0:12,0:20:20.99:0,21,182	0/1:27,5:30:85.91:86,0,426	0/1:17,0:17:1.78:117,0,2	0/0:18,3:21:2.47:0,2,455
chr10	105215373	.	A	ATC	4221.42	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.213;DP=905;FS=9.152;HRun=0;HaplotypeScore=170.5468;InbreedingCoeff=0.9954;MQ=74.43;MQ0=10;MQRankSum=-7.270;QD=24.98;ReadPosRankSum=-3.552;VQSLOD=4.5029;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,102,1322	1/1:7,2:9:13.60:191,14,0	0/0:60,0:38:62.89:0,63,734	0/0:87,0:42:51.99:0,52,683	0/0:33,0:33:69.21:0,69,880	0/0:24,0:24:43.93:0,44,529	0/0:23,0:23:47.37:0,47,588	1/1:36,7:42:97.99:1439,98,0	0/0:30,0:30:62.82:0,63,1016	0/0:33,0:33:96.30:0,96,1233	0/0:29,0:29:78.24:0,78,998	0/0:32,0:32:84.26:0,84,1077	0/0:28,0:28:78.23:0,78,994	0/0:27,0:27:75.23:0,75,960	0/0:43,0:43:99:0,105,1362	0/0:34,0:34:93.30:0,93,1207	0/0:34,0:34:80.98:0,81,1005	0/0:28,0:28:72.21:0,72,910	1/1:19,10:27:40.12:752,40,0	1/1:20,11:31:38.91:569,39,0	1/1:20,10:29:34.95:534,35,0	0/0:25,0:25:69.21:0,69,877	0/0:17,0:17:39.13:0,39,506	0/0:22,0:22:45.09:0,45,584	0/0:24,0:24:35.31:0,35,498	0/0:28,0:28:66.21:0,66,849	1/1:18,8:27:48.62:736,49,0	0/0:32,0:32:87.24:0,87,1107
chr10	105215407	.	CTGT	C	1395.70	PASS	AB=0.953;AC=9;AF=0.161;AN=56;BaseQRankSum=10.027;DP=971;FS=26.475;HRun=0;HaplotypeScore=203.7880;InbreedingCoeff=0.0486;MQ=62.69;MQ0=20;MQRankSum=-8.591;QD=7.23;ReadPosRankSum=-5.496;VQSLOD=0.2366;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,129,2827	1/1:6,2:8:9.84:114,10,0	0/0:81,0:39:62.34:0,62,1395	0/0:119,0:47:14.42:0,14,1001	0/0:26,0:26:66.10:0,66,1324	0/1:26,0:25:99:203,0,293	0/1:25,0:25:66.32:66,0,253	0/1:34,15:43:99:475,0,831	0/0:26,0:26:75.26:0,75,1681	0/0:46,0:46:99:0,129,2886	0/0:28,0:28:81.28:0,81,1816	0/0:39,0:39:99:0,108,2404	0/0:31,0:31:93.32:0,93,2050	0/0:33,0:33:87.30:0,87,1936	0/0:40,0:40:99:0,117,2630	0/0:38,0:38:99:0,114,2485	0/0:32,0:32:96.04:0,96,2020	0/0:29,0:29:81.25:0,81,1726	0/1:21,0:18:31.03:31,0,564	0/1:20,1:18:99:114,0,208	0/0:22,13:33:12.26:0,12,127	0/0:25,0:25:66.18:0,66,1411	0/0:21,0:21:51.05:0,51,948	0/0:23,0:23:63.22:0,63,1408	0/1:23,0:23:99:260,0,252	0/0:33,0:33:90.31:0,90,2012	0/1:19,0:19:99:275,0,314	0/0:24,0:24:64.41:0,64,1555
chr10	105215409	.	GTTGTC	G	161.80	PASS	AB=0.984;AC=7;AF=0.125;AN=56;BaseQRankSum=8.825;DP=968;FS=3.452;HRun=0;HaplotypeScore=232.3993;InbreedingCoeff=0.1063;MQ=62.27;MQ0=18;MQRankSum=-7.122;QD=1.12;ReadPosRankSum=-5.836;VQSLOD=0.9702;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,4193	1/1:8,0:8:4.38:25,4,0	0/0:83,0:42:71.29:0,71,2127	0/0:121,0:48:13.80:0,14,1596	0/0:26,0:26:69.11:0,69,1771	0/1:25,0:24:42.18:42,0,473	0/1:24,0:24:12.82:13,0,293	0/1:42,4:40:99:108,0,950	0/0:28,0:28:84.29:0,84,2417	0/0:47,0:47:99:0,135,4295	0/0:28,0:28:81.28:0,81,2513	0/0:37,0:38:99:0,108,3215	0/0:32,0:32:96.33:0,96,2938	0/0:33,0:33:90.31:0,90,2765	0/0:41,0:41:99:0,120,3692	0/0:39,0:39:99:0,117,3330	0/0:32,0:32:82.92:0,83,2699	0/0:29,0:29:78.27:0,78,2251	0/0:21,0:19:51.16:0,51,860	0/0:21,0:18:17.77:0,18,341	0/0:32,0:31:11.26:0,11,148	0/0:24,0:24:66.18:0,66,1912	0/0:20,0:20:57.07:0,57,1354	0/0:24,0:24:69.23:0,69,2009	0/1:21,0:21:65.01:65,0,317	0/0:31,0:31:90.31:0,90,2841	0/1:20,0:19:36.34:36,0,494	0/0:24,0:24:64.11:0,64,2158
chr10	105215410	.	T	TTGTCTC	3113.13	PASS	AB=0.849;AC=12;AF=0.214;AN=56;BaseQRankSum=10.780;DP=975;FS=18.160;HRun=0;HaplotypeScore=246.3542;InbreedingCoeff=0.4744;MQ=62.13;MQ0=18;MQRankSum=-11.072;QD=15.88;ReadPosRankSum=-4.315;VQSLOD=1.3340;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,126,2564	1/1:6,0:8:0.37:133,0,0	0/0:84,0:43:24.82:0,25,1084	0/0:116,0:48:45.43:0,45,833	0/0:26,0:26:51.14:0,51,981	1/1:3,21:26:36.12:1029,36,0	1/1:7,17:25:12.04:313,12,0	0/1:47,0:41:99:347,0,214	0/0:28,0:28:66.21:0,66,1354	0/0:45,0:45:99:0,132,2698	0/0:29,0:29:75.26:0,75,1583	0/0:38,0:38:87.30:0,87,1821	0/0:32,0:32:87.27:0,87,1758	0/0:32,0:32:84.25:0,84,1708	0/0:40,0:40:99:0,108,2253	0/0:40,0:40:92.31:0,92,1860	0/0:32,0:32:78.24:0,78,1606	0/0:27,0:28:63.10:0,63,1206	0/1:20,0:20:88.55:254,0,89	0/1:16,0:17:59.40:64,0,59	0/0:31,0:31:2.47:0,2,42	0/0:24,0:24:57.19:0,57,1128	0/0:20,0:20:36.12:0,36,758	0/0:23,0:24:60.14:0,60,1129	1/1:6,17:24:29.94:769,30,0	0/0:30,0:30:84.29:0,84,1774	0/1:11,0:21:34.70:367,0,35	0/0:24,0:24:62.99:0,63,1273
chr10	105215524	.	G	GTC	4075.27	PASS	AB=0.845;AC=11;AF=0.196;AN=56;BaseQRankSum=1.193;DP=901;FS=4.969;HRun=0;HaplotypeScore=178.8086;InbreedingCoeff=0.6930;MQ=64.61;MQ0=5;MQRankSum=-6.654;QD=18.87;ReadPosRankSum=-3.282;VQSLOD=3.0414;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,116,1619	1/1:4,8:12:24.08:414,24,0	0/1:39,0:20:4.40:4,0,234	0/0:75,0:55:20.73:0,21,653	0/0:37,0:37:99:0,108,1538	0/0:19,0:19:45.12:0,45,608	0/0:23,0:23:60.20:0,60,854	0/1:48,5:41:99:623,0,103	0/0:30,0:30:84.24:0,84,1203	0/0:36,0:36:99:0,108,1512	0/0:14,0:14:42.13:0,42,582	0/0:36,0:36:93.31:0,93,1331	0/0:19,0:19:57.19:0,57,815	0/0:25,0:25:69.21:0,69,968	0/0:49,0:49:99:0,117,1610	0/0:36,0:36:99:0,105,1464	0/0:28,0:28:78.68:0,79,1088	0/0:26,0:26:56.66:0,57,833	1/1:11,18:26:54.36:900,54,0	1/1:8,16:24:42.14:739,42,0	0/1:14,22:34:11.30:518,0,11	0/0:28,0:28:78.23:0,78,1083	0/0:26,0:25:69.23:0,69,985	0/0:41,0:41:99:0,105,1373	0/0:15,0:15:42.14:0,42,593	0/0:46,0:46:99:0,135,1816	1/1:8,15:21:51.13:877,51,0	0/0:26,0:26:77.22:0,77,1022
chr10	105215561	.	GTCTC	G	2882.44	PASS	AB=0.655;AC=11;AF=0.196;AN=56;BaseQRankSum=11.936;DP=859;FS=8.729;HRun=0;HaplotypeScore=209.5691;InbreedingCoeff=0.8841;MQ=70.18;MQ0=2;MQRankSum=-10.413;QD=20.89;ReadPosRankSum=-6.322;VQSLOD=1.1417;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,128,3227	0/1:9,10:19:83.44:437,0,83	0/0:46,0:40:99:0,101,2037	0/0:60,0:50:77.91:0,78,1774	0/0:41,0:41:99:0,111,2678	0/0:19,0:19:42.13:0,42,1029	0/0:24,0:24:54.17:0,54,1246	1/1:34,7:36:53.42:727,53,0	0/0:28,0:28:78.25:0,78,1962	0/0:33,0:33:93.25:0,93,2075	0/0:19,0:19:54.19:0,54,1361	0/0:37,0:37:93.31:0,93,2351	0/0:26,0:26:75.24:0,75,1887	0/0:23,0:23:60.21:0,60,1490	0/0:52,0:52:99:0,117,2901	0/0:35,0:35:93.31:0,93,2267	0/0:25,0:25:69.17:0,69,1597	0/0:20,0:20:45.91:0,46,1222	1/1:10,2:10:17.78:152,18,0	1/1:7,21:28:54.39:985,54,0	1/1:13,10:23:23.22:345,23,0	0/0:32,0:32:84.27:0,84,2053	0/0:22,0:22:63.20:0,63,1511	0/0:48,0:48:99:0,132,3308	0/0:19,0:19:48.16:0,48,1220	0/0:40,0:40:99:0,103,2403	1/1:4,11:15:27.07:415,27,0	0/0:23,0:23:68.31:0,68,1615
chr10	105215588	.	T	TC	357.15	PASS	AB=0.814;AC=4;AF=0.071;AN=56;BaseQRankSum=7.353;DP=799;FS=0.764;HRun=0;HaplotypeScore=180.1896;InbreedingCoeff=-0.0764;MQ=73.21;MQ0=2;MQRankSum=-2.694;QD=3.84;ReadPosRankSum=-2.692;VQSLOD=3.0515;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,99,1692	0/1:12,7:19:99:245,0,224	0/0:47,0:38:35.70:0,36,1153	0/0:52,0:41:50.28:0,50,800	0/0:37,0:37:99:0,108,1509	0/0:19,0:19:54.07:0,54,691	0/0:24,0:24:69.19:0,69,943	0/0:36,0:36:99:0,99,1346	0/0:22,0:22:41.18:0,41,816	0/0:34,0:34:99:0,99,1385	0/0:20,0:20:60.20:0,60,839	0/0:31,0:31:87.20:0,87,1140	0/0:25,0:25:72.22:0,72,988	0/0:19,0:19:54.18:0,54,755	0/0:44,0:44:99:0,129,1752	0/0:34,0:34:99:0,102,1389	0/0:23,0:23:63.21:0,63,877	0/0:19,0:19:20.07:0,20,622	0/1:15,4:17:99:139,0,454	0/1:30,7:37:12.40:12,0,395	0/0:12,1:13:17.93:0,18,186	0/0:31,0:31:87.28:0,87,1200	0/0:13,0:13:36.11:0,36,486	0/0:51,0:51:99:0,144,1970	0/0:18,0:18:51.17:0,51,713	0/0:37,0:37:99:0,109,1466	0/1:15,3:17:68.41:68,0,195	0/0:10,0:10:30.10:0,30,420
chr10	105215617	.	C	CTG	1540.79	PASS	AB=0.778;AC=6;AF=0.107;AN=56;BaseQRankSum=8.641;DP=808;FS=2.893;HRun=0;HaplotypeScore=193.2285;InbreedingCoeff=-0.1200;MQ=73.15;MQ0=1;MQRankSum=-8.399;QD=11.25;ReadPosRankSum=-1.002;VQSLOD=3.5187;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,117,1745	0/1:11,3:14:99:126,0,318	0/0:40,0:38:99:0,99,1372	0/0:56,0:49:81.89:0,82,1219	0/0:30,0:30:84.25:0,84,1243	0/0:22,0:22:56.87:0,57,867	0/0:33,0:33:93.29:0,93,1383	0/1:22,8:30:99:594,0,417	0/0:19,0:19:42.01:0,42,608	0/0:32,0:32:93.32:0,93,1424	0/0:19,0:19:54.17:0,54,804	0/0:31,0:31:87.27:0,87,1289	0/0:23,0:23:69.23:0,69,1053	0/0:23,0:23:60.18:0,60,893	0/0:40,0:40:99:0,108,1603	0/0:40,0:40:99:0,114,1743	0/0:24,0:24:63.21:0,63,964	0/0:18,0:18:27.62:0,28,667	0/1:13,5:16:99:257,0,342	0/1:26,15:41:99:348,0,200	0/1:11,3:13:97.09:97,0,122	0/0:32,0:32:87.30:0,87,1330	0/0:15,0:15:42.14:0,42,641	0/0:51,0:51:99:0,132,2020	0/0:22,0:22:63.21:0,63,962	0/0:43,0:43:99:0,126,1899	0/1:12,7:18:99:244,0,180	0/0:13,0:13:36.12:0,36,550
chr10	105215645	.	CTG	C	2318.99	PASS	AB=0.757;AC=8;AF=0.143;AN=56;BaseQRankSum=8.950;DP=836;FS=14.680;HRun=0;HaplotypeScore=203.3409;InbreedingCoeff=0.3354;MQ=68.69;MQ0=1;MQRankSum=-8.130;QD=13.72;ReadPosRankSum=-3.530;VQSLOD=1.2522;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,1:40:90.17:0,90,1403	0/1:12,4:16:54.07:169,0,54	0/0:38,0:34:48.40:0,48,757	0/0:55,0:48:58.39:0,58,903	0/0:25,0:25:66.11:0,66,1007	0/0:24,0:24:50.64:0,51,743	0/0:28,0:28:78.18:0,78,1190	1/1:25,14:38:5.41:801,5,0	0/0:23,0:23:33.11:0,33,561	0/0:39,0:39:93.25:0,93,1435	0/0:26,0:26:72.21:0,72,1151	0/0:31,0:31:84.25:0,84,1363	0/0:20,0:20:56.96:0,57,844	0/0:28,0:28:72.20:0,72,1127	0/0:35,0:35:87.22:0,87,1339	0/0:34,0:34:87.24:0,87,1372	0/0:30,0:30:78.16:0,78,1223	0/0:13,1:14:1.16:0,1,430	0/1:19,11:26:20.45:560,0,20	0/1:23,20:43:70.40:466,0,70	1/1:8,11:18:21.06:273,21,0	0/0:27,0:27:68.28:0,68,1204	0/0:13,0:13:36.07:0,36,525	0/0:49,0:49:99:0,114,1778	0/0:24,0:24:48.09:0,48,724	0/0:49,0:49:99:0,138,2184	0/1:17,5:21:99:191,0,147	0/0:14,0:14:33.08:0,33,510
chr10	105215698	.	C	CTCTG	613.40	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=6.633;DP=773;FS=13.991;HRun=0;HaplotypeScore=210.8347;InbreedingCoeff=0.3604;MQ=49.58;MQ0=28;MQRankSum=-0.900;QD=3.02;ReadPosRankSum=-2.366;VQSLOD=1.0051;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:41:28.42:0,28,412	0/0:11,0:11:3.93:0,4,144	0/0:17,0:3:5.97:0,6,47	0/0:34,0:17:21.77:0,22,217	0/0:23,0:23:33.62:0,34,352	0/1:21,0:21:0.38:141,0,0	1/1:17,0:16:25.78:194,26,0	0/0:43,0:37:2.56:0,3,262	1/1:10,20:33:2.81:81,3,0	0/0:30,0:26:50.76:0,51,399	0/0:27,0:26:47.90:0,48,388	0/0:35,0:34:36.23:0,36,416	0/1:19,0:18:7.63:8,0,231	0/0:24,0:23:50.47:0,50,429	0/0:35,0:35:30.15:0,30,552	0/0:22,0:21:40.68:0,41,359	0/0:33,0:32:14:0,14,396	0/1:17,0:17:34.09:34,0,200	0/1:21,0:18:0.45:0,0,168	0/1:30,0:29:74.68:75,0,175	0/0:27,0:23:29.68:0,30,237	0/0:32,0:30:18.15:0,18,271	0/0:21,0:18:23.96:0,24,199	0/0:53,0:52:24.03:0,24,481	1/1:26,0:26:26.92:217,27,0	0/0:36,0:36:82.01:0,82,660	0/1:18,0:17:17.55:18,0,76	0/0:24,0:23:13.26:0,13,294
chr10	105216106	.	ATG	A	151.88	PASS	AB=0.956;AC=14;AF=0.292;AN=48;BaseQRankSum=0.998;DP=622;FS=1.439;HRun=0;HaplotypeScore=97.9597;InbreedingCoeff=-0.0842;MQ=61.44;MQ0=19;MQRankSum=-0.156;QD=0.53;ReadPosRankSum=-0.624;VQSLOD=1.9630;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:3.01:32,3,0	0/0:5,0:5:6.01:0,6,58	1/1:43,0:19:0.47:1,0,0	./.	0/1:18,0:19:21.81:22,0,57	0/0:11,0:12:0:0,0,0	0/0:15,0:16:0:0,0,1	./.	1/1:16,0:15:2.98:32,3,0	0/1:17,0:17:8.13:8,0,34	0/0:7,0:7:3.01:0,3,44	0/1:19,1:20:16.78:17,0,159	0/0:16,0:16:6.49:0,6,88	0/0:20,0:20:12.04:0,12,170	0/0:22,0:21:9.01:0,9,112	0/1:21,1:23:16.97:26,0,17	0/1:32,1:33:16.75:17,0,155	0/1:23,2:26:42.69:43,0,149	0/0:27,0:25:6.02:0,6,76	0/0:11,0:15:6:0,6,52	0/0:53,0:50:27.05:0,27,314	0/0:14,0:11:3.47:0,3,27	0/0:12,0:12:3.01:0,3,44	0/1:34,3:36:68.36:68,0,216	./.	0/1:21,0:20:13:13,0,96	0/0:14,0:17:3.47:0,3,27	./.
chr10	105216320	.	A	AAGTGCTCTG	996.85	PASS	AC=24;AF=1.000;AN=24;BaseQRankSum=-1.552;DP=23;FS=0.000;HRun=0;HaplotypeScore=14.6623;InbreedingCoeff=-0.1558;MQ=114.01;MQ0=0;MQRankSum=-1.734;QD=47.47;ReadPosRankSum=-0.639;VQSLOD=2.6450;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:8.99:117,9,0	1/1:1,0:1:3.01:90,3,0	1/1:3,1:4:5.70:358,6,0	./.	1/1:0,0:1:2.98:21,3,0	./.	1/1:1,0:1:3.01:49,3,0	./.	1/1:0,0:1:2.97:20,3,0	./.	./.	./.	./.	./.	1/1:1,0:1:3.01:50,3,0	./.	1/1:1,0:2:5.98:70,6,0	./.	1/1:1,0:1:3:27,3,0	./.	1/1:2,0:2:3:25,3,0	./.	1/1:1,0:1:3.01:50,3,0	./.	./.	./.	./.	1/1:1,0:2:6.02:193,6,0
chr10	105219576	.	GA	G	3977.97	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.253;DP=595;FS=7.086;HRun=1;HaplotypeScore=79.0626;InbreedingCoeff=0.9836;MQ=68.58;MQ0=1;MQRankSum=-1.632;QD=34.00;ReadPosRankSum=-2.361;VQSLOD=2.3866;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,1604	1/1:0,9:9:21.07:291,21,0	0/0:22,0:20:25.42:0,25,561	0/0:13,1:12:7.96:0,8,205	0/0:21,0:21:63.21:0,63,929	0/0:21,0:21:54.18:0,54,800	0/0:24,0:24:69.18:0,69,968	1/1:0,27:27:81.09:988,81,0	0/0:19,0:19:57.19:0,57,832	0/0:24,0:24:69.22:0,69,995	0/0:7,0:7:21.07:0,21,313	0/0:24,0:24:72.23:0,72,1037	0/0:18,0:18:48.09:0,48,687	0/0:19,0:19:57.19:0,57,838	0/0:17,0:17:50.34:0,50,653	0/0:34,0:34:76.30:0,76,1281	0/0:26,0:26:75.18:0,75,1051	0/0:21,0:21:59.37:0,59,872	1/1:6,14:20:57.11:707,57,0	1/1:2,22:24:57.14:769,57,0	1/1:2,19:21:45.11:603,45,0	0/0:16,0:16:48.08:0,48,671	0/0:22,0:22:63.16:0,63,894	0/0:23,0:23:56.89:0,57,805	0/0:21,0:20:51.14:0,51,722	0/0:28,0:28:84.26:0,84,1184	1/1:2,14:16:48.08:621,48,0	0/0:15,0:15:45.06:0,45,622
chr10	105219614	.	AGTGTGTGT	A	2265.11	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=10.118;DP=643;FS=4.818;HRun=0;HaplotypeScore=190.9211;InbreedingCoeff=0.9304;MQ=52.01;MQ0=19;MQRankSum=-9.152;QD=22.21;ReadPosRankSum=-4.419;VQSLOD=2.1742;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:78.11:0,78,2123	1/1:5,4:9:12.04:276,12,0	./.	./.	0/0:15,0:15:27.09:0,27,687	0/0:11,0:17:19.47:0,19,212	0/0:13,0:19:17.97:0,18,145	0/0:28,0:28:3.01:0,3,51	0/0:17,0:18:38.68:0,39,1540	0/0:30,0:29:42.01:0,42,1080	0/0:8,0:10:21.07:0,21,636	0/0:20,0:20:51.16:0,51,1823	0/0:18,0:22:42.75:0,43,1161	0/0:15,0:17:39.13:0,39,1427	0/0:22,0:24:54.19:0,54,1815	0/0:29,0:31:69.22:0,69,2366	0/0:30,0:32:67.63:0,68,2217	0/0:16,0:18:26.67:0,27,998	1/1:14,4:18:14.72:444,15,0	1/1:8,18:27:45.14:796,45,0	1/1:22,4:28:12.88:150,13,0	0/0:25,0:26:54.64:0,55,1682	0/0:20,0:19:26.64:0,27,773	0/0:24,0:25:44.41:0,44,1367	0/0:10,0:19:12.01:0,12,149	0/0:25,0:26:45.45:0,45,1176	1/1:5,11:17:33.11:764,33,0	0/0:18,0:20:45.11:0,45,1288
chr10	105219651	.	G	GCA	3644.61	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.556;DP=697;FS=0.826;HRun=0;HaplotypeScore=143.1063;InbreedingCoeff=0.9993;MQ=60.33;MQ0=9;MQRankSum=-6.467;QD=24.30;ReadPosRankSum=0.760;VQSLOD=4.5217;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:90.50:0,91,1271	1/1:12,0:12:23.95:261,24,0	0/0:25,0:17:41.85:0,42,679	0/0:32,0:25:29.96:0,30,812	0/0:16,0:15:44.94:0,45,645	0/0:18,0:18:45.02:0,45,525	0/0:17,0:17:39.08:0,39,535	1/1:1,25:26:47.38:1057,47,0	0/0:20,0:20:60.16:0,60,873	0/0:22,0:21:63.12:0,63,898	0/0:13,0:13:36.09:0,36,502	0/0:29,0:29:84.25:0,84,1266	0/0:22,0:22:54.61:0,55,778	0/0:29,0:29:72.23:0,72,1103	0/0:22,0:22:60.18:0,60,909	0/0:36,0:36:99:0,102,1538	0/0:34,0:34:93.02:0,93,1292	0/0:24,0:24:68.23:0,68,963	1/1:16,1:17:48.82:635,49,0	1/1:28,0:27:40.51:406,41,0	1/1:36,8:42:40.34:613,40,0	0/0:28,0:28:72.20:0,72,1033	0/0:14,0:13:33.10:0,33,498	0/0:41,0:41:90.28:0,90,1375	0/0:18,0:18:33.08:0,33,462	0/0:27,0:27:76.41:0,76,995	1/1:21,1:22:62.82:673,63,0	0/0:20,0:20:51.89:0,52,668
chr10	105219726	.	TTG	T	5835.56	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.474;DP=819;FS=0.000;HRun=0;HaplotypeScore=111.6151;InbreedingCoeff=0.9988;MQ=68.28;MQ0=0;MQRankSum=-3.286;QD=30.39;ReadPosRankSum=-3.138;VQSLOD=5.7461;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:99:0,123,2029	1/1:4,11:15:39.09:479,39,0	0/0:26,0:24:53.01:0,53,759	0/0:18,0:17:24.08:0,24,401	0/0:20,1:21:22.01:0,22,881	0/0:33,0:33:93.32:0,93,1542	0/0:26,0:26:63.12:0,63,922	1/1:9,31:40:96.27:1184,96,0	0/0:23,0:23:66.23:0,66,1103	0/0:35,0:35:99:0,99,1611	0/0:11,0:11:30.10:0,30,496	0/0:46,0:46:99:0,132,2196	0/0:23,0:23:60.21:0,60,1000	0/0:32,0:32:90.31:0,90,1497	0/0:31,0:31:87.27:0,87,1402	0/0:40,0:39:99:0,111,1849	0/0:38,0:38:99:0,102,1675	0/0:30,0:30:78.27:0,78,1292	1/1:6,23:29:72.21:901,72,0	1/1:9,17:26:69.21:866,69,0	1/1:2,56:58:99:1567,126,0	0/0:28,0:28:72.22:0,72,1152	0/0:16,0:16:48.16:0,48,803	0/0:38,0:38:81.18:0,81,1247	0/0:22,0:22:57.19:0,57,953	0/0:32,0:32:78.27:0,78,1300	1/1:2,22:24:66.21:840,66,0	0/0:14,0:14:42.14:0,42,694
chr10	105219936	.	AGTATGTATGTATGTATGTAT	A	6630.46	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.290;DP=934;FS=4.156;HRun=0;HaplotypeScore=466.5551;InbreedingCoeff=0.9711;MQ=68.42;MQ0=2;MQRankSum=-5.286;QD=40.18;ReadPosRankSum=-4.102;VQSLOD=1.4056;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:46:78.25:0,78,4460	1/1:1,13:14:8.82:421,9,0	0/0:27,0:24:8.90:0,9,297	0/0:27,0:23:27.02:0,27,591	0/0:19,0:20:45.14:0,45,3413	0/0:41,0:41:75.26:0,75,6265	0/0:34,0:34:57.17:0,57,3175	1/1:20,31:51:93.04:1376,93,0	0/0:20,0:39:57.20:0,57,4259	0/0:62,0:63:99:0,160,12294	0/0:18,0:20:36.10:0,36,2665	0/0:50,0:50:99:0,108,8436	0/0:28,0:28:69.22:0,69,4973	0/0:41,0:41:96.30:0,96,7206	0/0:56,0:57:99:0,132,9846	0/0:61,0:61:99:0,135,9816	0/0:20,0:22:42.13:0,42,2621	0/0:14,0:15:29.45:0,29,1470	1/1:7,14:21:39.13:1357,39,0	1/1:3,16:19:24.08:1009,24,0	1/1:24,0:23:15.01:361,15,0	0/0:42,0:43:99:0,99,8175	0/0:18,0:18:42.02:0,42,2905	0/0:28,0:29:57.11:0,57,3902	0/0:19,0:28:48.15:0,48,3736	0/0:46,0:48:99:0,108,7579	1/1:8,28:36:45.15:2107,45,0	0/0:11,0:11:24.08:0,24,2053
chr10	105219955	.	AT	A	790.74	PASS	AB=0.955;AC=6;AF=0.107;AN=56;BaseQRankSum=10.470;DP=897;FS=2.708;HRun=1;HaplotypeScore=140.8350;InbreedingCoeff=-0.1174;MQ=57.18;MQ0=3;MQRankSum=-4.163;QD=5.90;ReadPosRankSum=-3.314;VQSLOD=-0.6550;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,113,1688	0/1:13,0:13:20.76:21,0,38	0/0:19,0:13:37.66:0,38,519	0/0:26,0:14:39.13:0,39,574	0/0:21,0:21:61.43:0,61,914	0/0:34,0:34:99:0,102,1552	0/0:31,0:31:93.30:0,93,1416	0/1:36,0:36:99:511,0,652	0/0:41,0:40:97.47:0,97,1204	0/0:70,0:70:99:0,209,3156	0/0:17,0:17:46.40:0,46,704	0/0:44,0:44:99:0,126,1955	0/0:31,0:31:88.82:0,89,1362	0/0:41,0:41:99:0,123,1928	0/0:59,0:59:99:0,173,2650	0/0:61,0:61:99:0,181,2779	0/0:24,0:24:64.45:0,64,953	0/0:15,0:15:39.13:0,39,598	0/1:15,0:15:56.63:209,0,57	0/1:16,0:16:25.61:26,0,129	0/1:15,9:23:99:138,0,245	0/0:43,0:44:99:0,126,1943	0/0:18,0:18:51.17:0,51,799	0/0:30,0:30:72.24:0,72,1123	0/0:26,0:26:66.20:0,66,921	0/0:52,0:52:99:0,150,2282	0/1:30,0:30:9.33:9,0,249	0/0:12,0:11:30.10:0,30,471
chr10	105220303	.	A	ATG	9091.09	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-17.149;DP=1058;FS=4.463;HRun=0;HaplotypeScore=142.3096;InbreedingCoeff=0.9983;MQ=61.07;MQ0=0;MQRankSum=0.943;QD=35.51;ReadPosRankSum=-0.275;VQSLOD=6.6373;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,99,1286	1/1:4,7:11:18.06:312,18,0	0/0:36,0:30:81.24:0,81,1049	0/0:39,0:37:64.18:0,64,1020	0/0:19,0:19:51.17:0,51,678	0/0:37,0:37:99:0,102,1358	0/0:35,0:35:99:0,99,1280	1/1:13,38:51:99:1985,120,0	0/0:37,0:37:93.28:0,93,1207	0/0:68,0:67:99:0,181,2384	0/0:19,0:19:48.14:0,48,623	0/0:59,0:59:99:0,163,2139	0/0:48,0:48:99:0,126,1677	0/0:40,0:40:99:0,111,1476	0/0:45,0:45:99:0,111,1403	0/0:46,0:46:99:0,129,1670	0/0:17,0:17:42.23:0,42,627	0/0:18,0:18:48.60:0,49,622	1/1:7,19:27:60.19:979,60,0	1/1:1,20:21:30.10:516,30,0	1/1:18,108:127:99:4417,256,0	0/0:41,0:41:99:0,105,1397	0/0:26,0:26:72.24:0,72,956	0/0:34,0:34:75.18:0,75,999	0/0:24,0:24:57.16:0,57,745	0/0:49,0:49:99:0,132,1731	1/1:1,18:19:51.17:883,51,0	0/0:20,0:20:54.13:0,54,696
chr10	105220388	.	TTG	T	6178.55	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.980;DP=1110;FS=5.164;HRun=0;HaplotypeScore=141.6462;InbreedingCoeff=0.9966;MQ=60.83;MQ0=7;MQRankSum=6.962;QD=27.83;ReadPosRankSum=-2.708;VQSLOD=5.0969;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:56:99:0,138,2375	1/1:0,8:8:15.05:193,15,0	0/0:61,0:26:67.09:0,67,1009	0/0:66,0:32:49.44:0,49,944	0/0:18,0:18:51.17:0,51,841	0/0:26,0:25:69.23:0,69,1133	0/0:35,0:35:99:0,102,1674	1/1:9,42:51:99:1553,126,0	0/0:41,0:41:65.84:0,66,1679	0/0:65,0:65:99:0,175,2906	0/0:16,0:16:42.13:0,42,679	0/0:62,0:62:99:0,153,2484	0/0:45,0:45:99:0,120,1994	0/0:37,0:37:99:0,105,1712	0/0:48,0:48:99:0,135,2278	0/0:48,0:48:99:0,135,2203	0/0:16,0:16:48.16:0,48,780	0/0:27,0:27:81.17:0,81,1332	1/1:7,21:27:62.99:792,63,0	1/1:7,19:25:45.01:579,45,0	1/1:27,55:80:99:2173,160,0	0/0:43,0:43:99:0,111,1845	0/0:24,0:24:66.21:0,66,1087	0/0:48,0:49:99:0,129,2129	0/0:32,0:32:90.30:0,90,1472	0/0:62,0:62:99:0,169,2762	1/1:1,26:27:69.22:888,69,0	0/0:11,0:11:27.09:0,27,456
chr10	105220733	.	GCAAA	G	7353.81	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.843;DP=759;FS=2.497;HRun=0;HaplotypeScore=125.4257;InbreedingCoeff=0.9875;MQ=87.58;MQ0=0;MQRankSum=-7.548;QD=45.96;ReadPosRankSum=-1.200;VQSLOD=5.1471;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,3396	1/1:0,7:7:21.07:406,21,0	0/0:31,0:31:84.28:0,84,2208	0/0:24,0:24:63.16:0,63,1466	0/0:19,0:19:57.18:0,57,1491	0/0:17,0:17:51.17:0,51,1335	0/0:20,0:20:60.20:0,60,1586	1/1:0,35:35:99:1814,105,0	0/0:36,0:36:99:0,102,2477	0/0:31,0:31:93.32:0,93,2505	0/0:14,0:14:42.14:0,42,1063	0/0:27,0:27:81.26:0,81,2100	0/0:34,0:34:99:0,102,2716	0/0:24,0:24:72.25:0,72,1930	0/0:24,0:24:72.23:0,72,1848	0/0:33,0:33:96.32:0,96,2574	0/0:35,0:35:99:0,105,2707	0/0:42,0:42:99:0,117,3050	1/1:1,20:21:54.16:1010,54,0	1/1:2,16:18:39.13:754,39,0	1/1:1,48:49:99:2091,108,0	0/0:22,0:22:63.14:0,63,1605	0/0:24,0:24:72.23:0,72,1855	0/0:36,0:36:99:0,108,2949	0/0:26,0:26:78.22:0,78,1978	0/0:30,0:30:87.29:0,87,2281	1/1:1,29:30:66.23:1278,66,0	0/0:5,0:5:9.03:0,9,246
chr10	105222946	.	G	GA	4758.48	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-9.616;DP=669;FS=13.308;HRun=1;HaplotypeScore=73.0437;InbreedingCoeff=0.9773;MQ=67.57;MQ0=0;MQRankSum=0.036;QD=39.00;ReadPosRankSum=-1.769;VQSLOD=3.4436;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:62:99:0,162,2056	1/1:0,11:11:26.97:395,27,0	0/0:10,0:12:20.16:0,20,300	0/0:14,0:13:26.68:0,27,303	0/0:21,0:24:50.52:0,51,723	0/0:21,0:21:63.15:0,63,800	0/0:23,0:23:66.15:0,66,811	1/1:0,29:28:81.18:1109,81,0	0/0:24,0:25:68.56:0,69,952	0/0:28,0:28:72.19:0,72,922	0/0:21,0:21:60.16:0,60,800	0/0:31,0:33:78.19:0,78,982	0/0:27,0:27:78.24:0,78,1044	0/0:29,0:29:87.26:0,87,1162	0/0:31,0:32:84.14:0,84,1016	0/0:25,0:25:75.23:0,75,1004	0/0:32,0:33:96.19:0,96,1213	0/0:29,0:32:77.69:0,78,1032	1/1:0,25:25:75.20:1081,75,0	1/1:1,15:16:45.15:701,45,0	1/1:0,12:12:27.09:425,27,0	0/0:13,0:13:39.05:0,39,475	0/0:12,0:12:33.08:0,33,413	0/0:20,0:20:57.17:0,57,752	0/0:12,0:13:36.10:0,36,462	0/0:43,0:43:99:0,129,1694	1/1:1,27:29:69.23:1048,69,0	0/0:5,0:5:6.02:0,6,82
chr10	105223785	.	C	CATGGTT	13326.75	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-10.154;DP=693;FS=10.006;HRun=0;HaplotypeScore=137.2731;InbreedingCoeff=0.9999;MQ=86.47;MQ0=0;MQRankSum=-14.830;QD=85.43;ReadPosRankSum=-1.651;VQSLOD=5.9131;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.29:0,90,2162	1/1:1,13:15:33.11:1204,33,0	0/0:26,0:26:78.05:0,78,1783	0/0:29,0:29:75.09:0,75,1641	0/0:35,0:35:99:0,102,2446	0/0:22,0:21:63.20:0,63,1428	0/0:25,0:25:75.24:0,75,1787	1/1:8,20:33:93.25:2857,93,0	0/0:18,0:18:48.16:0,48,1146	0/0:24,0:24:72.25:0,72,1733	0/0:20,0:20:60.19:0,60,1404	0/0:24,0:24:66.23:0,66,1625	0/0:23,0:23:66.23:0,66,1588	0/0:30,0:30:90.29:0,90,2041	0/0:28,0:28:81.28:0,81,1995	0/0:24,0:24:69.24:0,69,1667	0/0:28,0:28:84.26:0,84,1969	0/0:22,0:22:60.21:0,60,1418	1/1:3,16:23:66.19:2016,66,0	1/1:3,28:32:84.21:2887,84,0	1/1:3,13:16:36.12:1313,36,0	0/0:22,0:22:63.22:0,63,1518	0/0:21,0:21:60.21:0,60,1478	0/0:32,0:32:90.25:0,90,2034	0/0:12,0:12:36.11:0,36,803	0/0:26,0:26:78.26:0,78,1835	1/1:8,28:37:90.27:3049,90,0	0/0:14,0:14:39.11:0,39,848
chr10	105224794	.	TG	T	4358.23	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.463;DP=821;FS=11.452;HRun=6;HaplotypeScore=84.0133;InbreedingCoeff=0.9998;MQ=88.60;MQ0=0;MQRankSum=-0.211;QD=28.86;ReadPosRankSum=-1.164;VQSLOD=4.1405;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,175,2287	1/1:0,9:9:27.07:290,27,0	0/0:34,0:34:77.90:0,78,908	0/0:32,0:32:84.01:0,84,995	0/0:29,0:29:87.28:0,87,1143	0/0:26,0:26:78.25:0,78,1024	0/0:21,0:21:60.20:0,60,789	1/1:4,32:36:90.21:960,90,0	0/0:19,0:19:57.17:0,57,736	0/0:30,0:30:81.26:0,81,1055	0/0:24,0:24:69.21:0,69,893	0/0:32,0:32:84.27:0,84,1105	0/0:26,0:26:60.19:0,60,785	0/0:31,0:31:93.30:0,93,1224	0/0:44,0:44:99:0,126,1586	0/0:42,0:42:99:0,123,1619	0/0:37,0:37:99:0,99,1270	0/0:23,0:23:66.21:0,66,868	1/1:1,27:28:81.19:863,81,0	1/1:2,24:26:69.13:729,69,0	1/1:1,25:26:72.18:774,72,0	0/0:28,0:28:73.12:0,73,949	0/0:27,0:27:71.90:0,72,946	0/0:35,0:35:99:0,99,1303	0/0:21,0:21:63.20:0,63,829	0/0:31,0:31:90.28:0,90,1172	1/1:2,24:26:69.17:742,69,0	0/0:18,0:18:48.16:0,48,632
chr10	105225673	.	TCA	T	1441.35	PASS	AB=0.916;AC=31;AF=0.674;AN=46;BaseQRankSum=0.788;DP=561;FS=3.835;HRun=0;HaplotypeScore=70.7356;InbreedingCoeff=0.1529;MQ=63.19;MQ0=10;MQRankSum=0.556;QD=3.71;ReadPosRankSum=2.682;VQSLOD=1.5750;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,4:35:6.01:63,6,0	1/1:6,0:6:6.02:64,6,0	./.	./.	./.	1/1:13,7:20:6.01:64,6,0	1/1:27,3:30:9.02:96,9,0	0/0:19,0:18:0:0,0,0	1/1:13,2:17:8.85:78,9,0	1/1:15,3:18:4.27:61,4,0	0/0:10,1:11:0:0,0,0	1/1:21,8:28:17.54:172,18,0	1/1:15,2:17:6:56,6,0	1/1:8,6:13:9.02:96,9,0	1/1:16,2:20:1.76:173,2,0	1/1:14,7:22:14.76:141,15,0	0/1:32,4:36:31.58:84,0,32	1/1:11,3:13:6.02:64,6,0	0/0:14,0:14:3:0,3,25	0/0:11,0:10:6.01:0,6,58	0/0:30,0:30:11.99:0,12,101	1/1:16,0:16:3:32,3,0	0/1:16,2:18:25.87:26,0,38	0/1:33,8:40:8.26:268,0,8	0/1:16,1:17:13.90:14,0,123	./.	0/1:18,0:18:21.63:26,0,22	./.
chr10	105225724	.	C	CAA	1539.45	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-1.986;DP=576;FS=4.451;HRun=2;HaplotypeScore=86.0244;InbreedingCoeff=0.8879;MQ=57.79;MQ0=23;MQRankSum=-2.043;QD=11.24;ReadPosRankSum=-2.440;VQSLOD=-0.1393;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:83.80:0,84,675	1/1:6,0:6:17.46:120,17,0	0/0:11,0:8:13.79:0,14,110	0/1:20,0:16:2.06:2,0,94	0/0:9,0:8:17.91:0,18,140	0/0:15,0:15:20.98:0,21,177	0/0:28,0:27:55.85:0,56,501	1/1:25,0:23:56.62:483,57,0	0/0:15,0:15:38.96:0,39,328	0/0:21,0:21:56.85:0,57,497	0/0:9,0:8:20.97:0,21,174	0/0:29,0:28:68.30:0,68,563	0/0:16,0:16:44.87:0,45,359	0/0:27,0:26:62.84:0,63,512	0/0:19,0:20:52.77:0,53,411	0/0:24,0:24:59.16:0,59,491	0/0:43,0:42:67.31:0,67,772	0/0:21,0:19:47.74:0,48,368	1/1:18,0:16:9:229,9,0	1/1:13,0:12:23.95:255,24,0	1/1:31,0:26:50.77:560,51,0	0/0:11,0:11:20.52:0,21,147	0/0:14,0:14:29.87:0,30,256	0/0:47,0:47:99:0,129,1093	0/0:16,0:16:41.97:0,42,368	0/0:16,0:15:38.82:0,39,330	1/1:2,22:22:5.56:68,6,0	0/0:8,0:5:14.90:0,15,115
chr10	105225982	.	T	TC	4769.71	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-9.165;DP=659;FS=6.741;HRun=2;HaplotypeScore=60.1512;InbreedingCoeff=0.9983;MQ=75.54;MQ0=0;MQRankSum=-2.718;QD=33.59;ReadPosRankSum=-2.337;VQSLOD=3.8167;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1507	1/1:2,7:9:17.97:227,18,0	0/0:18,0:18:48.11:0,48,570	0/0:24,0:24:59.18:0,59,702	0/0:19,0:19:54.13:0,54,641	0/0:16,0:16:44.17:0,44,519	0/0:33,0:33:90.08:0,90,1022	1/1:4,30:34:93.28:1259,93,0	0/0:23,0:23:68.38:0,68,786	0/0:17,0:17:51.14:0,51,609	0/0:14,0:14:39.10:0,39,453	0/0:37,0:37:99:0,105,1272	0/0:29,0:29:84.25:0,84,1022	0/0:15,0:15:44.33:0,44,495	0/0:26,0:26:75.12:0,75,876	0/0:23,0:23:69.17:0,69,835	0/0:31,0:31:90.21:0,90,1078	0/0:36,0:36:99:0,105,1269	1/1:6,16:22:51.16:690,51,0	1/1:0,17:17:48.16:671,48,0	1/1:0,35:35:84.28:1186,84,0	0/0:15,0:15:42.12:0,42,508	0/0:14,0:14:36.09:0,36,413	0/0:38,0:38:99:0,111,1327	0/0:18,0:18:54.16:0,54,657	0/0:15,0:15:45.14:0,45,551	1/1:3,22:25:54.11:737,54,0	0/0:15,0:15:45.14:0,45,549
chr10	105226249	.	AGGTGTCAGCAGTGTATCCCAGTAGACTTTTCCCTAC	A	6072.26	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.893;DP=674;FS=4.986;HRun=0;HaplotypeScore=575.6505;InbreedingCoeff=0.8946;MQ=87.10;MQ0=1;MQRankSum=-6.402;QD=67.47;ReadPosRankSum=2.964;VQSLOD=0.3730;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,15813	1/1:6,3:9:12.04:1048,12,0	0/0:29,0:29:84.29:0,84,5197	0/0:34,0:34:93.32:0,93,7018	0/0:23,0:23:69.24:0,69,8628	0/0:22,0:22:66.23:0,66,7765	0/0:35,0:35:99:0,102,11453	1/1:18,0:18:3.01:47,3,0	0/0:29,0:29:87.30:0,87,11772	0/0:23,0:23:69.24:0,69,8229	0/0:11,0:11:30.10:0,30,3764	0/0:29,0:29:84.29:0,84,12106	0/0:24,0:24:66.21:0,66,8697	0/0:29,0:29:84.29:0,84,10744	0/0:39,0:39:99:0,117,16948	0/0:25,0:25:72.25:0,72,9562	0/0:31,0:30:87.30:0,87,11778	0/0:23,0:23:66.23:0,66,9285	1/1:7,2:9:6:305,6,0	1/1:10,9:18:21.07:1422,21,0	1/1:10,6:16:3.01:252,3,0	0/0:18,0:18:54.19:0,54,7246	0/0:17,0:17:51.13:0,51,6836	0/0:31,0:31:90.31:0,90,12099	0/0:25,0:25:75.26:0,75,8678	0/0:28,0:28:81.28:0,81,10109	1/1:6,13:19:33.11:2999,33,0	0/0:18,0:18:54.19:0,54,8304
chr10	105229378	.	A	ACTCC	3611.98	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-9.256;DP=476;FS=1.809;HRun=0;HaplotypeScore=77.5732;InbreedingCoeff=0.8422;MQ=79.17;MQ0=0;MQRankSum=-2.679;QD=21.37;ReadPosRankSum=-0.320;VQSLOD=3.0664;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,105,1685	1/1:4,0:4:5.95:52,6,0	0/1:16,0:15:0.48:0,0,106	0/0:16,0:16:3.18:0,3,56	0/0:7,0:7:12.02:0,12,173	1/1:3,14:19:30.10:702,30,0	1/1:6,10:17:15.05:369,15,0	1/1:14,10:24:27.01:485,27,0	0/0:17,0:17:30.10:0,30,496	0/0:19,0:19:42.14:0,42,696	0/0:7,0:7:9.03:0,9,149	0/0:43,0:43:99:0,102,1633	0/0:17,0:17:45.11:0,45,691	0/0:26,0:26:51.15:0,51,794	0/0:16,0:16:33.10:0,33,522	0/0:20,0:20:36.10:0,36,548	0/0:13,0:13:30.09:0,30,471	0/0:19,0:19:27.03:0,27,384	1/1:9,7:16:21.01:355,21,0	1/1:2,4:6:9.03:221,9,0	1/1:14,29:44:33.33:965,33,0	0/0:7,0:7:18.04:0,18,272	0/0:4,0:4:5.82:0,6,74	0/0:15,0:15:21.07:0,21,348	1/1:4,6:11:8.99:167,9,0	0/0:16,0:15:36.12:0,36,597	1/1:4,7:12:12.51:296,13,0	0/0:4,0:4:6.02:0,6,92
chr10	105230275	.	C	CT	1725.74	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-5.656;DP=515;FS=6.429;HRun=10;HaplotypeScore=92.3915;InbreedingCoeff=0.9398;MQ=75.24;MQ0=4;MQRankSum=-1.062;QD=14.75;ReadPosRankSum=-1.767;VQSLOD=3.3678;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:38.93:0,39,317	1/1:4,0:8:13.46:67,13,0	0/0:33,0:25:24.61:0,25,180	0/0:10,0:10:2.76:0,3,24	0/0:15,0:15:32.90:0,33,262	0/0:24,0:24:65.89:0,66,536	0/0:22,0:22:47.93:0,48,394	1/1:14,13:27:20.91:410,21,0	0/0:16,0:16:32.84:0,33,259	0/0:17,0:17:35.92:0,36,292	0/0:16,0:16:44.91:0,45,363	0/0:15,0:16:34.87:0,35,265	0/0:16,0:16:23.88:0,24,194	0/0:15,0:15:35.90:0,36,290	0/0:17,0:17:29.19:0,29,242	0/0:13,0:14:25.97:0,26,203	0/0:25,0:25:56.80:0,57,451	0/0:15,0:15:29.87:0,30,237	1/1:4,9:14:8.27:277,8,0	1/1:18,11:29:19.01:388,19,0	1/1:5,9:14:24.02:244,24,0	0/0:20,0:20:44.85:0,45,361	0/0:15,0:16:37.95:0,38,298	0/0:16,0:16:35.93:0,36,296	0/0:28,0:29:52.66:0,53,405	0/0:19,0:20:37.97:0,38,301	1/1:13,12:25:35.53:521,36,0	0/0:10,0:10:17.91:0,18,143
chr10	105230290	.	TGG	T	1557.04	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=2.340;DP=475;FS=1.737;HRun=11;HaplotypeScore=76.5952;InbreedingCoeff=0.5158;MQ=74.60;MQ0=5;MQRankSum=-2.045;QD=10.66;ReadPosRankSum=4.289;VQSLOD=1.5772;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:16:25.53:0,26,280	0/1:7,0:7:6.81:19,0,7	0/0:29,0:21:39.38:0,39,317	0/0:14,0:14:22.05:0,22,179	0/0:12,0:13:14.27:0,14,190	1/1:4,15:19:44.83:458,45,0	1/1:7,18:25:57.06:588,57,0	0/1:25,0:25:25.65:68,0,26	0/0:15,0:17:28.75:0,29,290	0/0:12,0:13:8.52:0,9,101	0/0:11,0:13:8.52:0,9,101	0/0:15,0:15:21.01:0,21,270	0/0:12,0:15:23.03:0,23,268	0/0:22,0:23:44.59:0,45,586	0/0:13,0:13:24.07:0,24,347	0/0:15,0:15:36.11:0,36,530	0/0:24,0:25:43.58:0,44,518	0/0:12,0:13:20.48:0,20,236	0/0:9,0:9:0.31:0,0,21	1/1:15,0:15:11.27:59,11,0	0/1:11,0:11:17.54:18,0,37	0/0:20,0:22:26.21:0,26,359	0/0:13,0:18:22.10:0,22,256	0/0:20,0:23:47.06:0,47,536	1/1:9,10:19:39.08:414,39,0	0/0:16,0:16:9:0,9,96	0/1:24,0:24:22.20:105,0,22	0/0:5,0:7:11.01:0,11,110
chr10	105230299	.	GGGT	G	791.37	PASS	AB=0.905;AC=11;AF=0.196;AN=56;BaseQRankSum=3.438;DP=411;FS=18.759;HRun=0;HaplotypeScore=77.5789;InbreedingCoeff=0.8423;MQ=79.82;MQ0=5;MQRankSum=-0.955;QD=10.15;ReadPosRankSum=-1.133;VQSLOD=1.5025;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:35.98:0,36,443	1/1:1,5:6:15.03:209,15,0	0/0:26,0:21:37.40:0,37,538	0/0:14,0:14:22.48:0,22,326	0/0:12,0:12:23.50:0,24,316	0/0:19,0:18:26.75:0,27,156	0/0:27,0:27:56.93:0,57,289	1/1:25,0:25:16.46:311,16,0	0/0:13,0:13:33.02:0,33,439	0/0:10,0:10:21.05:0,21,272	0/0:8,0:8:20.99:0,21,235	0/0:10,0:10:21.07:0,21,397	0/0:11,0:11:24.07:0,24,423	0/0:20,0:20:54.05:0,54,861	0/0:11,0:11:30.05:0,30,509	0/0:20,0:20:57.06:0,57,910	0/0:22,0:22:56.82:0,57,879	0/0:13,0:13:33.04:0,33,495	1/1:4,0:4:5.79:58,6,0	1/1:10,0:10:16.70:145,17,0	1/1:14,0:14:21.06:146,21,0	0/0:18,0:18:44.66:0,45,641	0/0:13,0:13:26.72:0,27,372	0/0:21,0:21:57.06:0,57,888	0/0:16,0:16:33.11:0,33,148	0/0:11,0:11:27.03:0,27,336	0/1:17,2:19:17.53:93,0,18	0/0:5,0:5:12.02:0,12,175
chr10	105230300	.	GGT	G	1647.98	PASS	AB=0.931;AC=15;AF=0.268;AN=56;BaseQRankSum=5.688;DP=419;FS=1.470;HRun=0;HaplotypeScore=67.4647;InbreedingCoeff=0.7339;MQ=80.44;MQ0=5;MQRankSum=-1.508;QD=11.86;ReadPosRankSum=4.030;VQSLOD=3.4710;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:40.36:0,40,375	1/1:6,0:6:14.87:105,15,0	0/0:25,2:21:40.11:0,40,445	0/0:15,0:15:28.58:0,29,273	0/0:12,0:12:23.51:0,24,257	0/1:19,0:18:10.62:124,0,11	0/1:25,3:28:87.38:201,0,87	1/1:5,20:25:56.83:512,57,0	0/0:15,0:15:35.75:0,36,355	0/0:10,0:10:20.91:0,21,214	0/0:8,0:8:20.81:0,21,180	0/0:9,0:9:23.79:0,24,311	0/0:11,0:11:23.87:0,24,319	0/0:19,0:19:50.96:0,51,654	0/0:12,0:12:30.02:0,30,394	0/0:22,0:22:63.02:0,63,759	0/0:22,0:22:56.34:0,56,678	0/0:13,0:13:29.92:0,30,366	1/1:2,0:2:5.77:33,6,0	1/1:3,7:10:17.97:180,18,0	1/1:12,2:14:26.99:256,27,0	0/0:18,0:18:47.48:0,47,518	0/0:13,0:13:26.43:0,26,268	0/0:23,0:23:59.82:0,60,692	0/1:14,2:16:3.10:123,0,3	0/0:12,0:12:30.02:0,30,313	1/1:7,12:19:23.88:302,24,0	0/0:5,0:5:11.83:0,12,125
chr10	105230301	.	GT	G	786.62	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.557;DP=419;FS=5.830;HRun=1;HaplotypeScore=65.9491;InbreedingCoeff=0.9091;MQ=79.71;MQ0=5;MQRankSum=-2.019;QD=10.78;ReadPosRankSum=0.024;VQSLOD=1.4337;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,1:15:10.69:0,11,245	1/1:6,0:6:14.34:75,14,0	0/0:21,2:18:18.33:0,18,255	0/0:14,0:14:19.57:0,20,190	0/0:12,0:12:17.08:0,17,192	0/0:19,0:18:37.68:0,38,218	0/0:29,0:29:46.38:0,46,347	1/1:22,1:23:41.34:404,41,0	0/0:16,0:17:21.68:0,22,218	0/0:10,0:10:19.55:0,20,177	0/0:7,1:8:16.52:0,17,139	0/0:10,0:10:26.77:0,27,281	0/0:11,0:11:18.04:0,18,216	0/0:19,0:19:25.36:0,25,452	0/0:12,0:12:29.59:0,30,312	0/0:22,0:22:62.88:0,63,609	0/0:22,1:23:37.97:0,38,493	0/0:12,0:12:19.81:0,20,270	1/1:2,0:3:8.66:49,9,0	1/1:9,1:10:17.67:111,18,0	1/1:12,0:12:26.41:209,26,0	0/0:22,0:22:47.29:0,47,432	0/0:12,0:12:17.51:0,18,166	0/0:22,0:22:55.61:0,56,476	0/0:16,0:16:23.01:0,23,181	0/0:12,0:12:30:0,30,274	1/1:19,0:19:5.77:114,6,0	0/0:5,0:5:4.55:0,5,66
chr10	105234137	.	G	GAGAGATGCC	5693.09	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-2.200;DP=672;FS=1.198;HRun=0;HaplotypeScore=189.1437;InbreedingCoeff=0.9943;MQ=82.49;MQ0=0;MQRankSum=-10.594;QD=72.99;ReadPosRankSum=-2.665;VQSLOD=4.5116;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.22:0,78,2009	0/0:9,0:9:21.07:0,21,579	0/0:22,0:22:41.26:0,41,992	0/0:17,0:17:18.01:0,18,351	0/0:23,0:23:57.18:0,57,1606	1/1:10,16:26:54.66:2497,55,0	1/1:17,12:32:47.80:1820,48,0	0/0:25,0:25:66.18:0,66,1645	0/0:27,0:27:75.24:0,75,2005	0/0:17,0:17:45.14:0,45,1132	0/0:8,0:8:24.08:0,24,591	0/0:42,0:42:99:0,117,3216	0/0:32,0:32:84.27:0,84,2152	0/0:29,0:29:75.26:0,75,2155	0/0:19,0:19:54.19:0,54,1496	0/0:19,0:19:51.18:0,51,1448	0/0:51,0:51:99:0,135,3703	0/0:35,0:35:96.33:0,96,2650	0/0:25,0:25:60.18:0,60,1460	0/0:14,0:14:42.13:0,42,1146	0/0:45,0:45:99:0,126,3373	0/0:16,0:16:48.15:0,48,1292	0/0:10,0:10:27.02:0,27,521	0/0:34,0:34:84.29:0,84,2346	1/1:12,8:20:29.90:1377,30,0	0/0:13,0:13:39.13:0,39,1011	0/0:20,0:20:54.18:0,54,1411	0/0:13,0:13:36.06:0,36,972
chr10	105242366	.	TCGGGGCCAGC	T	1184.57	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.944;DP=646;FS=0.000;HRun=0;HaplotypeScore=187.9931;InbreedingCoeff=0.9938;MQ=70.90;MQ0=1;MQRankSum=-6.059;QD=74.04;ReadPosRankSum=0.769;VQSLOD=3.4301;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.05:0,69,3339	1/1:2,14:16:39.13:1279,39,0	0/0:17,0:16:48.16:0,48,2367	0/0:22,0:22:57.16:0,57,2738	0/0:15,0:15:35.74:0,36,1656	0/0:20,0:20:60.21:0,60,3182	0/0:32,0:32:93.31:0,93,4566	0/0:26,0:26:69.19:0,69,3291	0/0:27,0:27:81.28:0,81,4087	0/0:26,0:26:78.26:0,78,3821	0/0:9,0:9:27.04:0,27,1161	0/0:28,0:28:72.25:0,72,3828	0/0:22,0:22:66.22:0,66,3205	0/0:27,0:27:78.27:0,78,3829	0/0:34,0:34:99:0,102,5198	0/0:34,0:34:96.32:0,96,4864	0/0:28,0:28:84.29:0,84,4380	0/0:25,0:25:72.20:0,72,3389	0/0:27,0:27:78:0,78,3043	0/0:7,0:7:21.03:0,21,991	0/0:33,0:32:96.31:0,96,4468	0/0:15,0:15:42.41:0,42,1506	0/0:13,0:13:31.29:0,31,1222	0/0:25,0:25:75.26:0,75,3718	0/0:24,0:24:72.24:0,72,3558	0/0:22,0:22:66.18:0,66,3253	0/0:38,0:37:99:0,111,5675	0/0:10,0:10:30.10:0,30,1577
chr10	105243331	.	CAAG	C	2535.25	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.588;DP=906;FS=0.000;HRun=0;HaplotypeScore=123.4430;InbreedingCoeff=0.9997;MQ=83.58;MQ0=0;MQRankSum=-4.354;QD=34.73;ReadPosRankSum=0.351;VQSLOD=3.8478;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,162,3381	0/0:12,0:12:30.08:0,30,625	0/0:19,0:19:51.17:0,51,1067	0/0:36,0:36:98.76:0,99,2143	0/0:36,0:36:99:0,105,2300	1/1:1,23:24:60.20:979,60,0	1/1:2,31:33:81.10:1257,81,0	0/0:35,0:35:96.33:0,96,2122	0/0:25,0:25:72.23:0,72,1526	0/0:30,0:30:87.30:0,87,1930	0/0:24,0:24:69.22:0,69,1499	0/0:43,0:43:99:0,123,2599	0/0:38,0:38:99:0,108,2411	0/0:39,0:39:99:0,114,2529	0/0:55,0:55:99:0,163,3489	0/0:40,0:40:99:0,114,2488	0/0:31,0:31:93.32:0,93,2074	0/0:27,0:27:81.28:0,81,1804	0/0:23,0:23:63.18:0,63,1233	0/0:39,0:39:99:0,108,2325	0/0:38,0:38:99:0,111,2392	0/0:39,0:39:99:0,111,2429	0/0:26,0:26:72.22:0,72,1522	0/0:30,0:30:90.13:0,90,1896	1/1:0,16:16:32.86:442,33,0	0/0:37,0:37:99:0,108,2359	0/0:38,0:38:99:0,111,2442	0/0:15,0:15:42.10:0,42,839
chr10	105244421	.	T	TGC	3459.11	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-2.351;DP=466;FS=0.521;HRun=0;HaplotypeScore=243.8437;InbreedingCoeff=0.9829;MQ=48.68;MQ0=0;MQRankSum=-4.051;QD=38.87;ReadPosRankSum=-2.062;VQSLOD=2.4268;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:54.18:0,54,756	0/0:9,0:9:15.05:0,15,218	0/0:6,0:6:15.05:0,15,221	0/0:8,0:8:19.28:0,19,230	0/0:20,0:20:54.17:0,54,766	0/0:12,0:11:27.09:0,27,389	0/0:20,0:20:48.16:0,48,703	1/1:15,21:35:77.84:1296,78,0	0/0:21,0:21:60.12:0,60,818	0/0:20,0:20:54.13:0,54,755	0/0:18,0:18:33.11:0,33,483	0/0:21,0:20:57.18:0,57,793	0/0:21,0:21:57.19:0,57,829	0/0:15,0:15:45.15:0,45,641	0/0:19,0:19:48.09:0,48,656	0/0:16,0:16:48.16:0,48,697	0/0:20,0:19:51.17:0,51,740	0/0:10,0:10:27.09:0,27,389	1/1:5,7:12:29.83:443,30,0	1/1:1,10:11:30.10:544,30,0	1/1:2,9:11:12.48:326,12,0	0/0:19,0:18:48.16:0,48,695	0/0:15,0:15:39.13:0,39,568	0/0:9,0:9:21.07:0,21,307	0/0:23,0:23:66.22:0,66,959	0/0:19,0:19:54.18:0,54,791	1/1:4,15:19:48.15:850,48,0	0/0:12,0:12:33.11:0,33,483
chr10	105244577	.	A	AT	7331.96	PASS	AB=0.667;AC=53;AF=0.981;AN=54;BaseQRankSum=0.645;DP=365;FS=0.000;HRun=1;HaplotypeScore=221.6780;InbreedingCoeff=-0.0193;MQ=34.97;MQ0=0;MQRankSum=-1.721;QD=20.14;ReadPosRankSum=0.570;VQSLOD=4.4818;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:15:38.22:302,38,0	1/1:0,4:4:8.67:46,9,0	0/1:1,1:2:12.88:26,0,13	./.	1/1:0,15:15:40.22:226,40,0	1/1:3,13:16:37.54:248,38,0	1/1:1,14:14:38.40:305,38,0	1/1:5,13:18:50.95:469,51,0	1/1:1,13:12:32.74:322,33,0	1/1:2,10:12:29.97:269,30,0	1/1:2,17:19:52.73:427,53,0	1/1:2,15:15:38.64:341,39,0	1/1:1,14:14:37.96:271,38,0	1/1:2,8:10:23.56:178,24,0	1/1:0,20:18:53.27:471,53,0	1/1:4,18:22:62.43:536,62,0	1/1:1,14:14:35.96:283,36,0	1/1:0,4:4:11.94:89,12,0	1/1:1,7:8:24.01:274,24,0	1/1:2,18:20:54.66:309,55,0	1/1:2,12:14:29.66:250,30,0	1/1:1,19:19:53.99:316,54,0	1/1:1,11:12:30.50:205,30,0	1/1:0,5:4:11.74:93,12,0	1/1:1,13:14:41.02:289,41,0	1/1:1,14:12:35.82:332,36,0	1/1:1,9:9:26.30:183,26,0	1/1:1,11:12:35.67:271,36,0
chr10	105244580	.	CA	C	3732.17	PASS	AB=0.667;AC=53;AF=0.981;AN=54;BaseQRankSum=0.126;DP=332;FS=3.016;HRun=3;HaplotypeScore=218.3868;InbreedingCoeff=-0.0015;MQ=34.43;MQ0=0;MQRankSum=-0.241;QD=11.28;ReadPosRankSum=0.287;VQSLOD=1.9391;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:14:26.99:181,27,0	1/1:1,3:4:6.94:23,7,0	0/1:1,1:2:12.85:19,0,13	./.	1/1:0,15:15:38.36:273,38,0	1/1:0,13:13:31.70:159,32,0	1/1:0,14:13:34.63:197,35,0	1/1:1,13:14:37.84:221,38,0	1/1:3,10:11:21.12:107,21,0	1/1:0,10:10:29.29:191,29,0	1/1:3,15:18:29.70:136,30,0	1/1:1,14:13:29.61:154,30,0	1/1:1,13:13:28.77:114,29,0	1/1:0,8:8:21.27:129,21,0	1/1:3,17:18:38.52:168,39,0	1/1:3,15:18:37.84:194,38,0	1/1:1,13:13:29.73:154,30,0	1/1:0,4:4:11.42:58,11,0	1/1:3,4:7:11.71:88,12,0	1/1:0,18:18:41.79:167,42,0	1/1:1,11:12:19.35:122,19,0	1/1:2,17:18:38.44:207,38,0	1/1:1,10:11:15.90:72,16,0	1/1:1,4:4:7.20:25,7,0	1/1:0,14:14:31.01:162,31,0	1/1:0,14:11:31.07:190,31,0	1/1:0,9:8:18.16:92,18,0	1/1:0,11:11:30.05:131,30,0
chr10	105244713	.	C	CT	2759.72	PASS	AB=0.729;AC=43;AF=0.768;AN=56;BaseQRankSum=-2.040;DP=526;FS=6.631;HRun=13;HaplotypeScore=61.7566;InbreedingCoeff=0.0271;MQ=61.79;MQ0=13;MQRankSum=-0.990;QD=5.76;ReadPosRankSum=0.156;VQSLOD=1.8537;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:14,14:26:17.30:127,0,17	1/1:2,6:8:2.67:28,3,0	0/0:38,1:10:11.04:0,11,64	0/1:30,0:12:8.31:8,0,40	0/1:7,6:13:23.13:91,0,23	1/1:8,1:9:0.03:124,0,0	0/1:13,16:30:39.95:157,0,40	1/1:15,0:14:4.37:25,4,0	1/1:9,6:16:5.84:42,6,0	1/1:12,4:16:9.89:131,10,0	0/1:13,9:22:0.96:93,0,1	1/1:11,10:21:14.69:121,15,0	1/1:4,10:15:1.01:129,1,0	1/1:14,4:16:17.41:135,17,0	0/1:8,10:17:8.47:72,0,8	1/1:14,16:28:20.01:165,20,0	0/1:16,26:42:19.21:257,0,19	1/1:6,25:32:10.35:386,10,0	0/0:8,0:8:0.43:0,0,1	1/1:10,0:10:0.47:1,0,0	1/1:4,0:4:5.59:26,6,0	1/1:3,7:11:17.86:152,18,0	1/1:7,10:16:20.16:161,20,0	0/1:5,10:13:2.89:112,0,3	1/1:5,14:20:21.28:172,21,0	1/1:13,4:16:10.19:129,10,0	0/1:11,0:11:0:0,0,0	1/1:9,1:10:6:52,6,0
chr10	105244724	.	T	TC	102.38	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=3.301;DP=478;FS=50.539;HRun=0;HaplotypeScore=52.6044;InbreedingCoeff=0.2797;MQ=55.01;MQ0=27;MQRankSum=-2.218;QD=1.26;ReadPosRankSum=4.513;VQSLOD=-0.1770;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:15.96:0,16,170	0/0:7,0:7:2.56:0,3,18	0/0:48,0:7:17.71:0,18,183	0/0:36,0:9:20.07:0,20,125	0/1:14,0:12:3.03:3,0,106	0/1:10,0:10:4.68:5,0,62	0/0:30,0:30:33.19:0,33,355	1/1:4,4:6:8.86:100,9,0	0/0:8,0:8:0.34:0,0,27	0/0:15,0:12:13.72:0,14,128	0/0:14,0:14:15.81:0,16,152	0/0:22,0:22:21.79:0,22,157	0/1:17,0:16:17.56:18,0,109	0/0:16,0:14:18.01:0,18,144	0/0:21,0:19:11.64:0,12,132	0/0:25,0:23:4.74:0,5,129	0/0:39,0:39:15.58:0,16,279	0/0:34,0:34:3.94:0,4,172	1/1:1,0:1:3:25,3,0	0/0:1,0:1:0:0,0,0	1/1:1,2:2:6.02:72,6,0	0/1:12,0:11:1.30:1,0,49	0/0:15,0:14:11.97:0,12,101	0/1:16,0:14:5.60:6,0,56	0/0:18,0:18:1.85:0,2,62	0/0:15,0:13:16.85:0,17,167	0/0:1,0:1:0:0,0,0	0/0:7,0:7:6.36:0,6,68
chr10	105245098	.	A	ACTGC	4397.19	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-7.442;DP=617;FS=12.601;HRun=0;HaplotypeScore=104.7295;InbreedingCoeff=0.8740;MQ=77.73;MQ0=0;MQRankSum=-2.724;QD=34.90;ReadPosRankSum=-1.525;VQSLOD=4.0477;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:54.18:0,54,888	0/0:4,0:4:9.03:0,9,133	0/0:18,0:19:32.95:0,33,399	0/1:11,0:11:0.55:1,0,81	0/0:6,0:6:9.03:0,9,138	0/0:16,0:16:42.13:0,42,678	0/0:42,0:42:84.25:0,84,1320	1/1:10,6:18:36.10:684,36,0	0/0:18,0:18:51.17:0,51,856	0/0:25,0:25:54.16:0,54,833	0/0:8,0:8:9.03:0,9,151	0/0:25,0:25:66.13:0,66,1020	0/0:29,0:29:69.24:0,69,1155	0/0:27,0:27:69.22:0,69,1131	0/0:35,0:35:84.27:0,84,1382	0/0:29,0:29:72.23:0,72,1177	0/0:35,0:35:87.23:0,87,1400	0/0:30,0:30:75.20:0,75,1204	1/1:12,5:19:27.05:550,27,0	1/1:5,9:15:21.07:519,21,0	1/1:14,28:45:55.72:1693,56,0	0/0:9,0:9:15.05:0,15,248	0/0:12,0:12:18.03:0,18,273	0/0:37,0:37:96.27:0,96,1580	0/0:26,0:26:60.10:0,60,938	0/0:26,0:26:54.18:0,54,906	1/1:6,12:17:39.13:950,39,0	0/0:5,0:5:6.02:0,6,96
chr10	105245416	.	A	ATG	1417.61	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=3.234;DP=412;FS=3.164;HRun=0;HaplotypeScore=168.1738;InbreedingCoeff=0.6581;MQ=57.15;MQ0=0;MQRankSum=-6.482;QD=18.90;ReadPosRankSum=0.109;VQSLOD=3.5573;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:15.01:0,15,152	0/0:2,0:2:5.89:0,6,57	0/1:3,0:5:34.78:35,0,61	0/0:11,0:10:23.11:0,23,213	0/0:12,0:12:24.01:0,24,274	0/0:16,0:16:18.04:0,18,227	0/0:22,0:22:12.04:0,12,160	1/1:26,0:26:69.13:842,69,0	0/0:11,0:11:18.03:0,18,208	0/0:14,0:14:36.05:0,36,397	0/0:8,0:8:12.01:0,12,133	0/0:31,0:31:39.10:0,39,479	0/0:14,0:14:30.08:0,30,386	0/0:17,0:17:12.04:0,12,156	0/0:26,0:26:33.11:0,33,458	0/0:29,0:29:33.87:0,34,361	0/0:15,0:15:11.99:0,12,127	0/0:7,0:7:16.21:0,16,184	1/1:11,0:11:30.09:377,30,0	0/0:2,7:9:0:0,0,0	1/1:20,0:20:9:86,9,0	0/0:9,0:9:3.01:0,3,38	0/0:6,0:6:3.01:0,3,43	0/0:20,0:20:12.01:0,12,131	0/0:9,0:9:6.01:0,6,67	0/0:24,0:24:70.12:0,70,808	1/1:13,0:12:18.06:233,18,0	0/0:2,0:2:6.02:0,6,81
chr10	105246386	.	GA	G	4486.52	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.221;DP=647;FS=2.127;HRun=4;HaplotypeScore=62.2339;InbreedingCoeff=0.9933;MQ=87.42;MQ0=0;MQRankSum=0.572;QD=31.82;ReadPosRankSum=-1.052;VQSLOD=4.8277;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1821	0/0:7,0:7:17.64:0,18,233	0/0:17,0:17:48.14:0,48,633	0/0:31,0:31:85.02:0,85,1057	0/0:19,0:19:54.18:0,54,755	0/0:18,0:18:54.18:0,54,756	0/0:26,0:26:78.23:0,78,1056	1/1:3,31:33:93.25:1090,93,0	0/0:23,0:23:69.22:0,69,950	0/0:14,0:14:36.10:0,36,474	0/0:9,0:9:27.09:0,27,378	0/0:25,0:25:75.24:0,75,1033	0/0:22,0:22:63.18:0,63,861	0/0:33,0:33:96.32:0,96,1344	0/0:33,0:33:99:0,99,1354	0/0:31,0:31:90.28:0,90,1227	0/0:31,0:31:90.30:0,90,1255	0/0:26,0:26:75.25:0,75,1050	1/1:2,20:22:60.16:698,60,0	1/1:1,9:10:27.08:324,27,0	1/1:3,47:50:99:1619,135,0	0/0:15,0:15:39.13:0,39,540	0/0:10,0:10:24.08:0,24,325	0/0:16,0:15:48.15:0,48,655	0/0:19,0:19:54.15:0,54,708	0/0:30,0:29:90.29:0,90,1240	1/1:2,23:25:63.19:755,63,0	0/0:5,0:5:15.05:0,15,210
chr10	105248373	.	GTGTC	G	1257.05	PASS	AB=0.543;AC=5;AF=0.089;AN=56;BaseQRankSum=4.912;DP=723;FS=2.256;HRun=0;HaplotypeScore=140.4643;InbreedingCoeff=0.7318;MQ=60.35;MQ0=5;MQRankSum=1.480;QD=20.61;ReadPosRankSum=2.036;VQSLOD=3.5227;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,132,2811	0/0:8,0:8:15.01:0,15,315	0/0:32,0:20:19.97:0,20,302	0/0:37,0:30:42.98:0,43,574	0/0:26,0:26:43.23:0,43,1420	1/1:6,13:19:27.09:431,27,0	1/1:7,16:23:24.08:398,24,0	0/0:40,0:34:66:0,66,845	0/0:18,0:18:48.11:0,48,1036	0/0:28,0:28:66.22:0,66,1537	0/0:17,0:17:39.09:0,39,809	0/0:25,0:25:55.36:0,55,1178	0/0:23,0:23:57.13:0,57,1186	0/0:21,0:21:42.12:0,42,902	0/0:30,0:30:72.21:0,72,1623	0/0:31,0:31:69.17:0,69,1437	0/0:31,0:31:72.16:0,72,1550	0/0:25,0:25:69.03:0,69,1334	0/0:27,0:26:57:0,57,804	0/0:26,0:26:8.94:0,9,69	0/0:25,0:23:11.96:0,12,108	0/0:18,1:19:7.46:0,7,1185	0/0:15,0:15:24.04:0,24,511	0/0:39,0:38:90.11:0,90,1701	0/1:3,16:19:11.82:557,0,12	0/0:27,0:27:62.89:0,63,1306	0/0:28,0:27:47.83:0,48,547	0/0:12,0:12:36.12:0,36,814
chr10	105248908	.	A	AG	4073.88	PASS	AB=0.625;AC=9;AF=0.161;AN=56;BaseQRankSum=11.047;DP=733;FS=20.237;HRun=3;HaplotypeScore=126.6638;InbreedingCoeff=0.8621;MQ=79.71;MQ0=0;MQRankSum=-14.681;QD=29.31;ReadPosRankSum=-3.359;VQSLOD=1.1875;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,1778	0/0:15,0:15:42.14:0,42,585	0/0:19,0:19:54.13:0,54,697	0/0:25,0:25:71.87:0,72,873	0/0:15,0:15:42.14:0,42,585	0/0:20,0:19:54.18:0,54,743	0/0:28,0:28:84.26:0,84,1154	1/1:15,31:46:99:1504,112,0	0/0:25,0:25:69.23:0,69,964	0/0:19,0:19:54.18:0,54,752	0/0:11,0:11:30.10:0,30,419	0/0:57,0:57:99:0,169,2303	0/0:33,0:33:93.25:0,93,1252	0/0:41,0:41:99:0,123,1701	0/0:39,0:39:99:0,117,1636	0/0:33,0:33:99:0,99,1384	0/0:28,0:28:84.26:0,84,1156	0/0:26,0:26:78.14:0,78,1026	1/1:11,14:25:25.80:741,26,0	0/1:4,6:10:12.26:247,0,12	1/1:11,22:33:10.20:735,10,0	0/0:15,0:15:45.15:0,45,629	0/0:11,0:11:27.07:0,27,359	0/0:24,0:24:69.22:0,69,948	0/0:10,0:10:27.09:0,27,373	0/0:29,0:29:81.27:0,81,1132	1/1:3,22:25:65.93:847,66,0	0/0:27,0:27:81.27:0,81,1131
chr10	105248911	.	T	TTTTTGCCCCA	14948.92	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.386;DP=727;FS=7.231;HRun=0;HaplotypeScore=231.4638;InbreedingCoeff=0.9995;MQ=78.19;MQ0=0;MQRankSum=-16.352;QD=109.12;ReadPosRankSum=-5.538;VQSLOD=2.4540;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,3803	0/0:14,0:14:42.08:0,42,1252	0/0:18,0:18:45.14:0,45,1313	0/0:23,0:23:61.74:0,62,1746	0/0:13,0:13:36.10:0,36,1058	0/0:19,0:19:57.17:0,57,1681	0/0:28,0:28:81.24:0,81,2441	1/1:30,11:41:99:4566,118,0	0/0:25,0:25:75.22:0,75,2234	0/0:19,0:19:57.19:0,57,1844	0/0:12,0:12:30.10:0,30,1008	0/0:54,0:54:99:0,163,5265	0/0:33,0:33:96.28:0,96,2856	0/0:42,0:42:99:0,123,3907	0/0:41,0:41:99:0,120,3959	0/0:33,0:33:99:0,99,3150	0/0:29,0:29:87.27:0,87,2676	0/0:24,0:24:72.25:0,72,2335	1/1:22,5:27:75.24:2930,75,0	1/1:6,4:10:30.10:1006,30,0	1/1:16,19:35:87.04:3244,87,0	0/0:16,0:16:48.15:0,48,1537	0/0:12,0:12:33.06:0,33,808	0/0:26,0:26:72.21:0,72,2193	0/0:11,0:11:30.09:0,30,934	0/0:28,0:28:81.22:0,81,2606	1/1:11,12:24:72.19:3202,72,0	0/0:27,0:27:75.26:0,75,2521
chr10	105249265	.	CTCA	C	3941.39	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.122;DP=734;FS=13.656;HRun=0;HaplotypeScore=107.5909;InbreedingCoeff=0.9994;MQ=85.37;MQ0=0;MQRankSum=-5.276;QD=35.83;ReadPosRankSum=-1.244;VQSLOD=3.6660;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,163,3541	0/0:11,0:11:33.07:0,33,678	0/0:23,0:24:71.93:0,72,1380	0/0:26,0:26:78.21:0,78,1621	0/0:20,0:20:60.21:0,60,1282	0/0:25,0:25:75.26:0,75,1683	0/0:36,0:36:99:0,108,2352	1/1:1,20:22:60.13:901,60,0	0/0:21,0:21:63.22:0,63,1393	0/0:21,0:21:60.21:0,60,1292	0/0:14,0:14:42.14:0,42,844	0/0:32,0:32:96.32:0,96,2085	0/0:30,0:30:87.25:0,87,1803	0/0:33,0:33:99:0,99,2139	0/0:38,0:38:99:0,114,2560	0/0:43,0:43:99:0,129,2818	0/0:35,0:35:99:0,105,2286	0/0:33,0:33:99:0,99,2173	1/1:0,16:16:45.11:764,45,0	1/1:3,7:10:24.04:390,24,0	1/1:0,40:40:60.03:1100,60,0	0/0:20,0:20:60.21:0,60,1322	0/0:17,0:17:51.16:0,51,1086	0/0:26,0:26:78.27:0,78,1737	0/0:19,0:19:54.18:0,54,1154	0/0:26,0:26:78.24:0,78,1669	1/1:1,21:22:47.33:787,47,0	0/0:20,0:20:60.21:0,60,1352
chr10	105250482	.	A	ACTGG	3055.12	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=0.061;DP=621;FS=23.989;HRun=0;HaplotypeScore=106.9094;InbreedingCoeff=0.9681;MQ=76.75;MQ0=0;MQRankSum=-3.197;QD=24.64;ReadPosRankSum=-1.984;VQSLOD=1.0237;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:51.17:0,51,849	0/0:6,0:6:15.05:0,15,251	0/0:22,0:22:33.11:0,33,520	0/0:19,0:19:32.42:0,32,484	0/0:11,0:11:18.06:0,18,301	0/0:24,0:24:45.15:0,45,749	0/0:29,0:29:63.22:0,63,1053	1/1:19,7:26:25.33:571,25,0	0/0:24,0:24:54.18:0,54,898	0/0:16,0:16:27.09:0,27,449	0/0:10,0:10:27.09:0,27,451	0/0:37,0:37:72.25:0,72,1200	0/0:27,0:27:63.22:0,63,1053	0/0:32,0:32:69.24:0,69,1150	0/0:31,0:31:69.20:0,69,1088	0/0:29,0:28:60.20:0,60,1000	0/0:34,0:34:93.30:0,93,1529	0/0:26,0:26:63.22:0,63,1048	1/1:10,6:18:27.08:549,27,0	1/1:5,6:11:18.06:427,18,0	1/1:40,14:54:57.10:1174,57,0	0/0:5,0:5:9.03:0,9,150	0/0:6,0:6:12.04:0,12,201	0/0:36,0:36:82.81:0,83,1332	0/0:9,0:9:18.06:0,18,299	0/0:14,0:14:27.09:0,27,450	1/1:8,7:15:21.07:508,21,0	0/0:16,0:16:45.15:0,45,752
chr10	105252216	.	GC	G	79.96	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.783;DP=736;FS=7.652;HRun=3;HaplotypeScore=104.0700;InbreedingCoeff=0.9819;MQ=74.48;MQ0=0;MQRankSum=-4.377;QD=8.88;ReadPosRankSum=0.489;VQSLOD=0.6051;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,1804	1/1:2,7:9:23.67:173,24,0	0/0:13,0:13:39.09:0,39,516	0/0:13,0:13:35.61:0,36,473	0/0:13,0:13:36.12:0,36,518	0/0:20,0:20:57.19:0,57,821	0/0:34,0:34:99:0,102,1429	0/0:33,0:33:96.31:0,96,1350	0/0:35,0:35:99:0,105,1512	0/0:35,0:35:99:0,102,1465	0/0:16,0:16:45.15:0,45,647	0/0:40,0:40:99:0,114,1622	0/0:32,0:32:96.31:0,96,1355	0/0:33,0:33:99:0,99,1425	0/0:33,0:33:99:0,99,1425	0/0:45,0:45:99:0,129,1854	0/0:36,0:36:99:0,108,1534	0/0:29,0:29:84.28:0,84,1205	0/0:22,0:22:60.19:0,60,848	0/0:21,0:21:63.21:0,63,907	0/0:49,0:49:99:0,147,2017	0/0:16,0:16:45.15:0,45,642	0/0:14,0:14:39.13:0,39,561	0/0:29,0:29:87.29:0,87,1249	0/0:15,0:15:45.13:0,45,611	0/0:30,0:30:84.28:0,84,1194	0/0:22,0:22:63.21:0,63,907	0/0:5,0:5:15.05:0,15,216
chr10	105252220	.	TGCC	T	165.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.513;DP=750;FS=5.490;HRun=0;HaplotypeScore=139.3304;InbreedingCoeff=0.9183;MQ=74.32;MQ0=0;MQRankSum=-4.497;QD=20.65;ReadPosRankSum=1.415;VQSLOD=3.4216;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,3275	1/1:1,7:8:8.71:248,9,0	0/0:15,0:15:42.14:0,42,924	0/0:12,0:12:27.07:0,27,559	0/0:14,0:14:39.12:0,39,906	0/0:20,0:20:60.18:0,60,1391	0/0:33,0:33:99:0,99,2347	0/0:36,0:36:99:0,105,2123	0/0:36,0:36:99:0,108,2562	0/0:35,0:35:99:0,105,2446	0/0:16,0:16:48.16:0,48,1176	0/0:37,0:37:99:0,111,2716	0/0:32,0:32:96.33:0,96,2316	0/0:34,0:34:99:0,102,2440	0/0:36,0:36:99:0,108,2493	0/0:42,0:42:99:0,123,2903	0/0:36,0:36:99:0,108,2575	0/0:31,0:31:93.30:0,93,2138	0/0:23,0:23:66.15:0,66,1374	0/0:21,0:21:63.22:0,63,1440	0/0:52,0:52:99:0,157,3464	0/0:16,0:16:48.16:0,48,1123	0/0:15,0:15:45.15:0,45,1073	0/0:31,0:31:93.30:0,93,2201	0/0:15,0:15:45.15:0,45,1092	0/0:30,0:30:90.31:0,90,2194	0/0:23,0:23:69.24:0,69,1521	0/0:5,0:5:15.05:0,15,370
chr10	105252630	.	C	CAAA	579.90	PASS	AB=0.667;AC=9;AF=0.161;AN=56;BaseQRankSum=4.439;DP=653;FS=3.928;HRun=0;HaplotypeScore=128.1963;InbreedingCoeff=0.8636;MQ=76.01;MQ0=1;MQRankSum=-1.917;QD=8.92;ReadPosRankSum=-2.114;VQSLOD=3.0957;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,2047	0/0:9,0:9:27.07:0,27,424	0/0:42,0:20:46.08:0,46,489	0/0:31,0:19:15.87:0,16,367	0/0:20,0:20:45.47:0,45,730	0/0:24,0:24:60.16:0,60,984	0/0:26,0:26:54.18:0,54,932	1/1:11,4:18:20.27:262,20,0	0/0:16,0:16:30.08:0,30,450	0/0:28,0:28:69.70:0,70,1183	0/0:23,0:23:63.09:0,63,1033	0/0:38,0:38:75.07:0,75,1182	0/0:21,0:21:36.01:0,36,582	0/0:19,0:19:45.11:0,45,709	0/0:25,0:25:60.19:0,60,1020	0/0:32,0:32:81.22:0,81,1340	0/0:25,0:25:66.23:0,66,1200	0/0:23,0:23:57.15:0,57,976	1/1:8,0:9:6.68:40,7,0	1/1:3,4:13:23.64:289,24,0	1/1:5,4:13:6.90:102,7,0	0/0:12,0:12:32.98:0,33,528	0/0:30,0:30:81.24:0,81,1360	0/0:24,0:24:56.47:0,56,1022	0/0:26,0:26:57.18:0,57,990	0/0:32,0:32:75.24:0,75,1294	0/1:6,2:12:2.57:40,0,3	0/0:16,0:16:48.15:0,48,781
chr10	105252631	.	CA	C	414.05	PASS	AB=0.800;AC=7;AF=0.125;AN=56;BaseQRankSum=1.184;DP=711;FS=5.540;HRun=15;HaplotypeScore=107.8680;InbreedingCoeff=0.1459;MQ=72.22;MQ0=2;MQRankSum=2.354;QD=2.21;ReadPosRankSum=3.324;VQSLOD=0.1117;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,2:46:49.28:0,49,725	0/0:9,0:10:23.84:0,24,198	0/1:41,1:19:7.77:8,0,70	0/0:28,3:18:1.72:0,2,92	0/0:20,1:24:14.19:0,14,266	0/1:9,14:23:40.55:154,0,41	0/1:11,16:29:13.02:148,0,13	0/0:27,0:29:61.44:0,61,325	0/0:17,0:19:14.82:0,15,114	0/1:28,3:31:2.66:3,0,211	0/0:22,1:25:0.42:0,0,365	0/0:34,4:38:21.20:0,21,385	0/0:19,2:21:29.09:0,29,223	0/0:17,0:21:31.72:0,32,264	0/0:22,1:27:27.29:0,27,345	0/0:33,0:34:43.61:0,44,481	0/0:26,1:28:42.82:0,43,510	0/0:21,2:25:12.13:0,12,321	0/0:14,0:14:23.09:0,23,133	0/0:17,0:17:40.04:0,40,212	0/0:14,0:14:8.46:0,8,43	0/0:12,0:12:15.96:0,16,183	0/0:22,4:29:21.10:0,21,400	0/0:26,0:26:44.90:0,45,380	1/1:8,18:27:13.97:210,14,0	0/1:28,4:34:16.16:16,0,325	0/0:18,0:18:34.28:0,34,195	0/0:16,0:16:26.94:0,27,226
chr10	105254438	.	GC	G	1734.07	PASS	AB=0.784;AC=18;AF=0.321;AN=56;BaseQRankSum=16.072;DP=785;FS=125.916;HRun=3;HaplotypeScore=159.9973;InbreedingCoeff=-0.4580;MQ=71.45;MQ0=0;MQRankSum=-10.968;QD=3.48;ReadPosRankSum=0.694;VQSLOD=-0.3117;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,10:48:15.81:0,16,1413	0/1:5,1:6:19.39:19,0,158	0/1:8,10:18:90.29:329,0,90	0/1:12,5:17:99:162,0,131	0/0:18,5:23:18.44:0,18,657	0/1:16,6:22:99:106,0,586	0/1:32,8:40:99:118,0,1243	0/0:27,1:28:60.17:0,60,831	0/1:18,10:28:99:162,0,702	0/1:28,9:37:99:143,0,993	0/1:11,4:15:0.05:0,0,397	0/1:32,7:39:29.84:30,0,1228	0/1:24,8:32:81.24:81,0,945	0/1:31,7:38:29.92:30,0,1214	0/1:22,12:34:99:176,0,860	0/1:26,8:34:50.33:50,0,948	0/1:41,8:49:10.25:10,0,1474	0/0:23,3:26:33.24:0,33,891	0/0:19,4:23:23.91:0,24,745	0/0:18,3:21:51.15:0,51,714	0/0:43,9:52:95.08:0,95,1699	0/1:15,10:25:99:132,0,542	0/0:7,5:12:7.77:0,8,285	0/0:33,0:33:99:0,99,1424	0/0:21,0:21:60.17:0,60,812	0/1:21,7:28:99:129,0,768	0/1:14,9:23:99:114,0,529	0/1:9,4:13:99:100,0,310
chr10	105254445	.	CGACCTAGCTCCCCT	C	8151.70	PASS	AB=0.834;AC=21;AF=0.375;AN=56;BaseQRankSum=14.344;DP=704;FS=89.469;HRun=0;HaplotypeScore=294.1112;InbreedingCoeff=-0.5931;MQ=71.43;MQ0=0;MQRankSum=-9.250;QD=15.68;ReadPosRankSum=3.478;VQSLOD=-0.0669;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,8:43:99:273,0,6720	0/1:4,1:5:99:115,0,640	0/1:12,5:17:99:890,0,755	0/1:12,1:14:99:420,0,1108	0/1:19,3:22:73.91:74,0,3267	0/1:13,4:17:99:339,0,2495	0/1:34,4:38:99:278,0,6468	0/0:21,0:21:60.21:0,60,3483	0/1:19,8:27:99:700,0,3805	0/1:25,8:33:99:690,0,4318	0/1:10,2:12:95.45:95,0,1794	0/1:33,5:38:99:279,0,6301	0/1:25,5:30:99:303,0,5166	0/1:28,4:32:99:298,0,5291	0/1:24,9:33:99:933,0,4966	0/1:23,4:27:99:312,0,4493	0/1:34,7:41:99:403,0,7149	0/0:21,2:23:63.22:0,63,4194	0/0:19,0:19:57.20:0,57,3224	0/0:21,1:22:63.22:0,63,4007	0/0:43,3:46:99:0,123,7846	0/1:15,8:23:99:470,0,3134	0/1:8,2:10:7.49:7,0,1647	0/0:33,0:33:99:0,99,6115	0/0:20,0:20:60.21:0,60,4289	0/1:20,5:25:99:449,0,3590	0/1:14,9:23:99:591,0,2815	0/1:8,2:10:99:231,0,1704
chr10	105254819	.	AT	A	1187.26	PASS	AB=0.808;AC=12;AF=0.214;AN=56;BaseQRankSum=11.466;DP=800;FS=16.630;HRun=15;HaplotypeScore=191.7092;InbreedingCoeff=0.3159;MQ=63.70;MQ0=3;MQRankSum=-7.641;QD=4.85;ReadPosRankSum=4.604;VQSLOD=0.2892;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,1:48:15.64:0,16,422	1/1:5,2:8:11.59:53,12,0	0/0:31,0:17:17.59:0,18,128	0/0:12,0:8:3:0,3,25	0/0:23,1:25:12.77:0,13,234	0/0:32,1:33:24.32:0,24,362	0/0:36,0:38:49.55:0,50,425	1/1:23,18:42:57.48:333,57,0	0/0:29,0:29:20.44:0,20,172	0/0:20,1:23:23.34:0,23,329	0/1:12,0:12:0.62:1,0,114	0/0:31,0:32:35.73:0,36,340	0/0:32,1:33:15.38:0,15,286	0/0:29,0:29:51.75:0,52,423	0/0:39,1:40:23.89:0,24,366	0/0:42,0:43:57.30:0,57,557	0/1:31,3:34:25.84:26,0,319	0/1:25,3:28:35.65:36,0,215	0/1:19,15:34:22.69:216,0,23	0/1:6,6:13:6.12:81,0,6	0/1:14,12:26:13.32:173,0,13	0/0:21,1:21:10.86:0,11,233	0/0:13,0:13:11.93:0,12,113	0/0:21,4:26:8.80:0,9,302	0/0:28,3:31:13.47:0,13,462	0/0:27,2:31:1.12:0,1,229	1/1:19,25:48:68.75:427,69,0	0/0:15,1:16:2.12:0,2,161
chr10	105254822	.	T	TG	2001.64	PASS	AB=0.800;AC=21;AF=0.375;AN=56;BaseQRankSum=19.038;DP=800;FS=149.188;HRun=0;HaplotypeScore=179.2961;InbreedingCoeff=-0.5609;MQ=63.70;MQ0=3;MQRankSum=-18.017;QD=3.43;ReadPosRankSum=6.756;VQSLOD=0.6825;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:32,17:49:99:267,0,776	0/1:7,3:10:66.53:67,0,123	0/0:32,0:18:24.33:0,24,278	0/1:12,0:8:8.79:9,0,93	0/0:25,0:30:52.14:0,52,633	0/1:22,9:31:99:175,0,619	0/1:29,10:40:99:130,0,763	0/1:32,7:40:31.83:32,0,678	0/1:15,1:28:65.84:66,0,372	0/1:18,4:22:21.20:21,0,513	0/1:10,1:11:0.22:0,0,256	0/1:25,6:33:99:139,0,634	0/1:17,12:31:99:280,0,483	0/1:21,6:27:99:109,0,626	0/1:28,12:40:99:202,0,795	0/1:30,11:42:99:241,0,878	0/1:26,6:34:97.28:97,0,750	0/1:17,8:25:99:167,0,506	0/1:22,0:34:16.47:16,0,417	0/1:11,1:12:2.21:2,0,217	0/0:21,0:27:8.20:0,8,428	0/1:18,6:23:41.84:42,0,470	0/1:9,4:13:83.56:84,0,225	0/1:21,3:25:11.18:11,0,598	0/0:32,0:33:85.78:0,86,1020	0/0:22,0:30:32.87:0,33,576	0/0:34,1:47:18.78:0,19,704	0/0:12,0:17:12.29:0,12,322
chr10	105258379	.	T	TA	1842.59	PASS	AB=0.783;AC=16;AF=0.286;AN=56;BaseQRankSum=-5.763;DP=526;FS=11.338;HRun=13;HaplotypeScore=67.7825;InbreedingCoeff=0.7293;MQ=66.50;MQ0=0;MQRankSum=0.939;QD=10.41;ReadPosRankSum=-2.873;VQSLOD=1.1353;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:40:47.69:0,48,469	0/0:4,0:4:5.08:0,5,39	0/0:11,0:11:5.04:0,5,53	0/0:7,0:7:2.13:0,2,15	0/1:10,1:12:2.04:2,0,122	1/1:11,11:22:24.91:225,25,0	1/1:8,18:26:36.51:335,37,0	1/1:13,21:34:27.41:380,27,0	0/0:13,0:15:25.80:0,26,170	0/0:17,0:18:22.28:0,22,149	0/0:14,0:17:29.52:0,30,181	0/0:29,0:29:59.35:0,59,408	0/0:16,0:16:32.64:0,33,225	0/0:16,0:17:28.67:0,29,191	0/0:21,0:21:38.55:0,39,267	0/0:20,0:21:49.58:0,50,335	0/0:22,0:25:63.58:0,64,423	0/0:18,0:18:41.15:0,41,287	1/1:8,12:20:32.98:293,33,0	1/1:2,12:14:6.30:177,6,0	1/1:3,11:14:30.51:280,31,0	0/0:12,0:13:25.03:0,25,165	0/0:15,0:16:23.98:0,24,165	0/0:18,0:18:38.63:0,39,267	1/1:6,11:17:0.43:143,0,0	0/0:25,0:25:35.40:0,35,240	0/1:8,10:18:11.13:193,0,11	0/0:15,0:16:34.73:0,35,232
chr10	105258585	.	G	GGACA	4036.67	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-8.580;DP=706;FS=1.754;HRun=0;HaplotypeScore=107.4478;InbreedingCoeff=0.9949;MQ=71.31;MQ0=0;MQRankSum=-4.165;QD=42.94;ReadPosRankSum=-0.879;VQSLOD=3.6844;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,162,2635	0/0:12,0:12:27.05:0,27,425	0/0:26,0:24:48.13:0,48,754	0/0:20,0:19:36.04:0,36,501	0/0:24,0:24:57.19:0,57,959	0/0:22,0:22:45.15:0,45,752	0/0:33,0:33:63.22:0,63,1050	1/1:10,6:17:27.09:627,27,0	0/0:23,0:23:60.21:0,60,1009	0/0:21,0:21:45.15:0,45,755	0/0:11,0:11:27.09:0,27,451	0/0:40,0:40:99:0,108,1816	0/0:25,0:25:69.24:0,69,1161	0/0:42,0:42:99:0,114,1925	0/0:37,0:37:87.29:0,87,1436	0/0:31,0:31:87.30:0,87,1460	0/0:32,0:32:75.22:0,75,1205	0/0:26,0:26:60.16:0,60,978	1/1:4,7:13:30.10:667,30,0	1/1:1,8:11:15.05:354,15,0	1/1:7,25:34:57.20:1419,57,0	0/0:16,0:16:33.11:0,33,545	0/0:16,0:16:42.14:0,42,706	0/0:31,0:31:84.29:0,84,1411	0/0:20,0:20:45.15:0,45,744	0/0:34,0:34:75.26:0,75,1259	1/1:2,14:18:39.13:970,39,0	0/0:14,0:14:24.08:0,24,405
chr10	105258696	.	G	GT	364.10	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=6.219;DP=472;FS=0.840;HRun=2;HaplotypeScore=54.0800;InbreedingCoeff=0.7834;MQ=77.04;MQ0=0;MQRankSum=-1.908;QD=9.84;ReadPosRankSum=-4.856;VQSLOD=-0.4505;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.21:0,81,973	0/0:3,0:3:8.99:0,9,95	0/0:11,0:11:20.83:0,21,234	0/0:18,0:18:40.77:0,41,503	0/0:9,0:9:27.05:0,27,306	0/0:22,0:22:63.18:0,63,766	0/0:49,0:49:99:0,132,1550	1/1:9,0:9:16.27:159,16,0	0/0:23,0:23:69.22:0,69,853	0/0:18,0:18:51.09:0,51,584	0/0:10,0:10:30.08:0,30,355	0/0:34,0:34:96.28:0,96,1167	0/0:23,0:23:63.08:0,63,715	0/0:19,0:19:54.15:0,54,655	0/0:28,0:28:75.21:0,75,905	0/0:21,0:21:60.18:0,60,732	0/0:29,0:29:84.18:0,84,994	0/0:17,0:17:48.10:0,48,565	0/1:5,0:5:12.22:75,0,12	1/1:2,0:2:3.01:43,3,0	1/1:11,1:12:13.64:134,14,0	0/0:8,0:8:24.05:0,24,282	0/0:11,0:11:30.06:0,30,332	0/0:14,0:14:39.12:0,39,475	0/0:9,0:9:24.06:0,24,284	0/0:22,0:22:66.16:0,66,783	1/1:0,9:9:8.94:102,9,0	0/0:9,0:9:27.05:0,27,307
chr10	105259426	.	TGGGGTG	T	880.15	PASS	AC=8;AF=0.160;AN=50;BaseQRankSum=4.558;DP=156;FS=0.000;HRun=0;HaplotypeScore=38.8404;InbreedingCoeff=0.6442;MQ=88.19;MQ0=1;MQRankSum=-4.947;QD=24.45;ReadPosRankSum=-0.053;VQSLOD=2.7667;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:9.03:0,9,299	./.	0/0:17,0:13:19.46:0,19,397	0/0:12,0:8:8.91:0,9,146	0/0:1,0:1:3.01:0,3,99	./.	0/0:4,0:4:9.03:0,9,298	1/1:2,4:6:9.03:179,9,0	0/0:5,0:5:12.04:0,12,398	0/0:4,0:4:9.03:0,9,296	0/0:3,0:3:9.03:0,9,298	0/0:3,0:3:9.03:0,9,298	0/0:4,0:4:6.02:0,6,199	0/0:6,0:6:12.04:0,12,386	0/0:6,0:6:15.05:0,15,495	0/0:11,0:11:24.08:0,24,764	0/0:5,0:5:12.04:0,12,399	0/0:9,0:9:24.08:0,24,797	1/1:3,3:6:9.03:192,9,0	./.	1/1:5,10:15:18.02:330,18,0	0/0:1,0:1:3.01:0,3,97	0/0:2,0:2:6.02:0,6,187	0/0:2,0:2:3.01:0,3,100	0/0:6,0:6:18.06:0,18,593	0/0:2,0:2:3.01:0,3,99	1/1:4,5:9:15.05:320,15,0	0/0:8,0:8:17.59:0,18,597
chr10	105259785	.	A	AT	5006.42	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-13.785;DP=701;FS=18.852;HRun=1;HaplotypeScore=66.4809;InbreedingCoeff=0.9993;MQ=86.54;MQ0=0;MQRankSum=-1.865;QD=42.07;ReadPosRankSum=-1.648;VQSLOD=2.5862;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1268	0/0:9,0:9:27.07:0,27,335	0/0:24,0:24:64.34:0,64,770	0/0:23,0:23:33.70:0,34,689	0/0:24,0:24:72.23:0,72,935	0/0:25,0:24:72.23:0,72,935	0/0:29,0:29:78.25:0,78,1012	1/1:3,19:22:60.20:897,60,0	0/0:27,0:27:78.25:0,78,1007	0/0:27,0:27:78.21:0,78,994	0/0:18,0:18:54.18:0,54,698	0/0:26,0:26:78.24:0,78,998	0/0:28,0:28:84.27:0,84,1086	0/0:35,0:35:99:0,102,1324	0/0:38,0:38:99:0,114,1480	0/0:21,0:21:63.19:0,63,804	0/0:40,0:40:99:0,117,1497	0/0:38,0:38:99:0,111,1423	1/1:0,21:21:63.16:918,63,0	1/1:0,9:9:27.09:404,27,0	1/1:1,35:36:99:1528,102,0	0/0:26,0:26:78.23:0,78,983	0/0:17,0:17:51.16:0,51,650	0/0:29,0:29:84.24:0,84,1050	0/0:14,0:13:42.13:0,42,535	0/0:20,0:20:57.17:0,57,725	1/1:0,31:31:84.28:1259,84,0	0/0:10,0:10:30.08:0,30,361
chr10	105259974	.	GAAGT	G	3449.18	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.254;DP=528;FS=3.916;HRun=0;HaplotypeScore=92.1755;InbreedingCoeff=0.9831;MQ=79.82;MQ0=1;MQRankSum=-4.794;QD=40.58;ReadPosRankSum=-2.639;VQSLOD=3.2415;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,3050	0/0:6,0:6:15.05:0,15,369	0/0:19,0:19:48.11:0,48,1097	0/0:13,0:13:36.08:0,36,746	0/0:15,0:15:39.13:0,39,1050	0/0:21,0:21:60.18:0,60,1558	0/0:21,0:21:60.20:0,60,1535	1/1:3,24:27:72.20:1290,72,0	0/0:18,0:18:51.16:0,51,1291	0/0:21,0:21:63.19:0,63,1618	0/0:9,0:9:18.06:0,18,476	0/0:16,0:16:48.16:0,48,1294	0/0:11,0:11:33.10:0,33,794	0/0:26,0:26:69.24:0,69,1850	0/0:28,0:28:78.27:0,78,2002	0/0:16,0:16:48.16:0,48,1255	0/0:35,0:35:99:0,99,2567	0/0:21,0:21:60.15:0,60,1404	1/1:5,20:24:57.16:1045,57,0	1/1:0,12:12:15.05:260,15,0	1/1:1,8:9:15.05:285,15,0	0/0:13,0:13:36.12:0,36,941	0/0:17,0:17:45.15:0,45,1141	0/0:30,0:30:87.30:0,87,2322	0/0:19,0:19:57.20:0,57,1538	0/0:24,0:24:69.24:0,69,1836	1/1:1,11:12:30.10:569,30,0	0/0:5,0:5:15.05:0,15,405
chr10	105260755	.	AAAAG	A	4114.44	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.734;DP=788;FS=3.174;HRun=0;HaplotypeScore=141.8936;InbreedingCoeff=0.9976;MQ=64.04;MQ0=1;MQRankSum=0.555;QD=32.14;ReadPosRankSum=-1.625;VQSLOD=3.6065;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:96.30:0,96,2235	0/0:6,0:12:24.08:0,24,349	0/0:33,0:23:36.44:0,36,671	0/0:21,0:19:30.91:0,31,552	0/0:27,0:27:60.21:0,60,1409	0/0:13,0:28:36.12:0,36,601	0/0:16,0:29:24.06:0,24,313	1/1:9,30:39:90.24:1366,90,0	0/0:22,0:22:42.14:0,42,964	0/0:30,0:30:72.25:0,72,1709	0/0:19,0:19:36.12:0,36,803	0/0:49,0:49:99:0,132,3055	0/0:35,0:35:81.28:0,81,1917	0/0:32,0:32:84.27:0,84,1832	0/0:36,0:36:84.29:0,84,1935	0/0:35,0:35:87.30:0,87,2110	0/0:24,0:24:51.18:0,51,1247	0/0:16,0:16:27.09:0,27,592	1/1:10,12:22:36.11:568,36,0	1/1:3,18:21:54.18:892,54,0	1/1:6,8:14:21.07:347,21,0	0/0:18,0:18:42.14:0,42,988	0/0:24,0:24:57.18:0,57,1286	0/0:33,0:33:87.30:0,87,2094	0/0:20,0:41:84.20:0,84,1302	0/0:43,0:43:96.33:0,96,2270	1/1:4,28:31:57.19:942,57,0	0/0:13,0:13:39.13:0,39,925
chr10	105261059	.	C	CAGTT	10229.34	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-4.946;DP=832;FS=6.507;HRun=0;HaplotypeScore=135.5086;InbreedingCoeff=0.9999;MQ=87.06;MQ0=0;MQRankSum=-8.585;QD=60.17;ReadPosRankSum=-3.548;VQSLOD=5.4524;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,2409	0/0:13,0:13:33.11:0,33,607	0/0:32,0:32:81.28:0,81,1486	0/0:27,0:27:69.20:0,69,1209	0/0:31,0:31:81.28:0,81,1476	0/0:26,0:26:75.24:0,75,1344	0/0:31,0:31:87.28:0,87,1571	1/1:11,30:44:99:2792,120,0	0/0:22,0:22:57.20:0,57,1037	0/0:36,0:36:99:0,99,1814	0/0:23,0:23:60.21:0,60,1104	0/0:40,0:40:99:0,117,2148	0/0:28,0:28:78.25:0,78,1391	0/0:26,0:26:72.19:0,72,1325	0/0:36,0:36:99:0,105,1921	0/0:40,0:40:99:0,120,2156	0/0:23,0:23:66.23:0,66,1204	0/0:26,0:26:72.25:0,72,1325	1/1:4,14:19:48.16:1225,48,0	1/1:6,23:29:69.23:1520,69,0	1/1:4,36:43:99:2632,102,0	0/0:29,0:29:84.29:0,84,1546	0/0:23,0:23:63.20:0,63,1129	0/0:24,0:24:68.04:0,68,1219	0/0:34,0:34:93.28:0,93,1669	0/0:33,0:33:93.32:0,93,1694	1/1:6,26:35:81.27:2060,81,0	0/0:14,0:14:42.13:0,42,722
chr10	105261760	.	G	GC	1214.07	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.352;DP=356;FS=5.341;HRun=0;HaplotypeScore=48.7791;InbreedingCoeff=0.7317;MQ=71.35;MQ0=0;MQRankSum=-0.441;QD=22.07;ReadPosRankSum=-1.984;VQSLOD=4.3886;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.16:0,48,666	0/0:2,0:2:2.99:0,3,23	0/0:7,0:7:18.06:0,18,249	0/0:5,0:5:12.93:0,13,166	0/0:7,0:7:21.07:0,21,292	1/1:0,1:1:3.01:41,3,0	1/1:2,40:42:94.74:1052,95,0	0/0:7,0:7:12.91:0,13,63	0/0:7,0:7:18.06:0,18,252	0/0:7,0:7:15.02:0,15,208	0/0:5,0:5:9.02:0,9,109	0/0:15,0:15:45.15:0,45,629	0/0:8,0:8:24.08:0,24,335	0/0:4,0:4:9.03:0,9,126	0/0:7,0:7:21.07:0,21,294	0/0:7,0:7:21.06:0,21,277	0/0:34,0:34:99:0,102,1394	0/0:41,0:41:99:0,117,1629	0/0:10,0:10:23.32:0,23,143	0/0:2,0:2:5.85:0,6,33	0/0:49,0:49:55.32:0,55,519	0/0:4,0:4:12.04:0,12,165	0/0:7,0:7:18.05:0,18,233	0/0:29,0:29:84.28:0,84,1172	1/1:1,11:12:19.61:251,20,0	0/0:14,0:14:39.12:0,39,519	0/0:4,0:4:11.72:0,12,68	0/0:2,0:2:6.02:0,6,79
chr10	105262048	.	T	TGG	8446.62	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-1.726;DP=602;FS=5.395;HRun=2;HaplotypeScore=73.5340;InbreedingCoeff=0.9942;MQ=81.43;MQ0=1;MQRankSum=-0.911;QD=47.19;ReadPosRankSum=-1.408;VQSLOD=4.0802;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.30:0,96,1391	1/1:0,6:6:12.04:225,12,0	0/0:16,0:16:39.11:0,39,545	0/0:18,0:18:35.81:0,36,559	0/0:16,0:16:45.14:0,45,640	1/1:0,15:16:42.14:786,42,0	1/1:0,25:25:72.25:1343,72,0	1/1:1,32:33:93.26:1640,93,0	0/0:29,0:29:87.26:0,87,1242	0/0:16,0:16:48.11:0,48,650	0/0:10,0:10:30.10:0,30,439	0/0:39,0:39:99:0,108,1547	0/0:17,0:17:51.17:0,51,749	0/0:15,0:15:42.14:0,42,605	0/0:29,0:29:81.27:0,81,1185	0/0:30,0:30:87.29:0,87,1280	0/0:32,0:32:96.30:0,96,1381	0/0:27,0:27:78.26:0,78,1139	1/1:0,15:16:42.13:742,42,0	1/1:0,9:9:27.05:466,27,0	1/1:1,40:40:93.32:1739,93,0	0/0:19,0:19:57.19:0,57,839	0/0:7,0:7:21.07:0,21,305	0/0:31,0:31:84.24:0,84,1213	1/1:3,13:16:39.13:719,39,0	0/0:20,0:20:57.19:0,57,822	1/1:0,17:16:42.14:786,42,0	0/0:18,0:18:54.18:0,54,792
chr10	105262704	.	TTGTGTG	T	207.16	PASS	AB=0.875;AC=8;AF=0.174;AN=46;BaseQRankSum=3.213;DP=582;FS=2.754;HRun=0;HaplotypeScore=117.5014;InbreedingCoeff=0.4927;MQ=70.37;MQ0=14;MQRankSum=-1.198;QD=1.83;ReadPosRankSum=0.255;VQSLOD=2.3232;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:15.01:0,15,258	./.	./.	./.	0/0:27,0:25:27.09:0,27,681	1/1:16,0:24:9.03:126,9,0	./.	0/0:22,0:22:0:0,0,0	0/0:12,0:17:3:0,3,38	0/0:18,0:17:12.04:0,12,206	0/0:12,0:12:15.05:0,15,417	0/0:15,0:15:5.97:0,6,67	0/0:13,0:13:6.02:0,6,96	0/0:12,0:14:8.69:0,9,156	0/0:17,0:17:6.01:0,6,121	0/0:25,0:25:27.09:0,27,702	0/0:36,2:38:21.15:0,21,692	0/0:19,0:19:7.58:0,8,135	1/1:19,0:19:6.02:98,6,0	1/1:10,5:14:5.41:39,5,0	0/1:28,0:26:14.93:15,0,43	0/0:19,0:18:7.42:0,7,43	0/0:16,0:15:6.02:0,6,158	0/0:22,0:24:17.96:0,18,281	./.	0/0:19,0:19:18.91:0,19,327	0/1:18,9:26:1.13:55,0,1	0/0:11,0:10:18.06:0,18,363
chr10	105264727	.	A	AGTCT	3620.60	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=4.418;DP=870;FS=0.000;HRun=0;HaplotypeScore=174.6326;InbreedingCoeff=0.7239;MQ=67.10;MQ0=2;MQRankSum=-7.138;QD=17.75;ReadPosRankSum=-6.042;VQSLOD=2.0367;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:90.23:0,90,1444	0/1:10,0:10:27.89:28,0,56	0/0:43,0:28:29.88:0,30,382	0/0:58,0:43:34.71:0,35,716	0/0:18,0:18:36.06:0,36,553	1/1:12,0:12:14.05:127,14,0	0/1:31,0:31:76.34:115,0,76	1/1:40,0:40:69.77:946,70,0	0/0:24,0:24:63.19:0,63,1011	0/0:43,0:43:99:0,105,1728	0/0:26,0:26:63.11:0,63,929	0/0:43,0:43:99:0,108,1749	0/0:39,0:39:96.28:0,96,1569	0/0:33,0:33:78.24:0,78,1228	0/0:49,0:49:99:0,117,1938	0/0:54,0:54:99:0,138,2272	0/0:44,0:44:94.64:0,95,1615	0/0:20,0:20:50.20:0,50,814	1/1:12,12:24:45:643,45,0	1/1:9,7:16:26.82:559,27,0	1/1:31,1:32:23.85:260,24,0	0/0:19,0:19:39.11:0,39,622	0/0:22,0:22:41.99:0,42,698	0/0:48,0:47:99:0,126,2049	0/1:9,0:9:16.02:16,0,37	0/0:31,0:31:72.20:0,72,1151	1/1:16,14:30:45.14:926,45,0	0/0:9,0:9:24.08:0,24,407
chr10	105264750	.	CTG	C	652.16	PASS	AB=0.918;AC=7;AF=0.125;AN=56;BaseQRankSum=6.117;DP=875;FS=1.285;HRun=0;HaplotypeScore=157.3757;InbreedingCoeff=0.1864;MQ=62.10;MQ0=9;MQRankSum=-2.947;QD=5.02;ReadPosRankSum=-4.681;VQSLOD=1.3195;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,126,2196	0/0:9,0:9:17.71:0,18,148	0/0:51,0:24:39.47:0,39,693	0/0:76,0:49:26.62:0,27,765	0/0:18,0:18:54.17:0,54,984	0/1:16,0:16:2.03:2,0,72	0/0:22,0:22:16.05:0,16,164	0/1:35,1:31:99:447,0,143	0/0:29,0:29:87.27:0,87,1566	0/0:41,0:40:99:0,120,2011	0/0:23,0:23:54.21:0,54,1190	0/0:45,0:45:99:0,132,2283	0/0:38,0:38:99:0,114,1925	0/0:29,0:29:71.11:0,71,1299	0/0:47,0:47:99:0,127,2385	0/0:53,0:53:99:0,142,2675	0/0:41,0:41:99:0,118,2066	0/0:28,0:28:77.95:0,78,1245	0/1:14,2:16:99:123,0,215	0/1:12,3:15:7.13:7,0,88	1/1:10,3:13:11.84:144,12,0	0/0:17,0:17:47.82:0,48,829	0/0:20,0:20:54.09:0,54,926	0/0:53,0:52:99:0,150,2710	0/0:4,0:4:6:0,6,51	0/0:39,0:39:99:0,103,1725	0/1:30,4:34:53.92:54,0,222	0/0:10,0:10:30.04:0,30,474
chr10	105264752	.	G	GTCTCTCTCTC	3609.07	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=10.313;DP=886;FS=1.041;HRun=0;HaplotypeScore=282.8955;InbreedingCoeff=0.7685;MQ=62.85;MQ0=10;MQRankSum=-7.047;QD=11.64;ReadPosRankSum=-4.814;VQSLOD=1.5711;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,108,2882	1/1:8,1:9:5.96:181,6,0	0/1:57,0:26:18.84:19,0,555	0/1:79,0:51:19.54:20,0,595	0/0:19,0:19:51.12:0,51,1477	1/1:4,11:19:15:603,15,0	1/1:11,10:25:12.04:476,12,0	1/1:17,0:33:33.80:349,34,0	0/0:30,0:30:84.27:0,84,2344	0/0:41,0:40:87.28:0,87,2397	0/0:22,0:23:60.19:0,60,1682	0/0:44,0:44:99:0,111,3167	0/0:38,0:38:98.92:0,99,2700	0/0:26,0:27:63.20:0,63,1679	0/0:45,0:46:99:0,120,3381	0/0:49,0:50:99:0,132,3758	0/0:42,0:42:85.79:0,86,3005	0/0:28,0:28:65.83:0,66,1753	1/1:16,0:18:8.05:114,8,0	1/1:10,0:15:14.73:499,15,0	1/1:9,0:12:10.43:127,10,0	0/0:16,0:16:42.14:0,42,1100	0/0:19,0:19:45.15:0,45,1300	0/0:53,0:52:99:0,138,3936	0/0:4,0:4:0.89:0,1,2	0/0:36,0:38:80.24:0,80,2385	1/1:17,0:37:41.87:1223,42,0	0/0:10,0:10:21.07:0,21,648
chr10	105264780	.	TCA	T	401.51	PASS	AB=0.921;AC=7;AF=0.125;AN=56;BaseQRankSum=7.092;DP=905;FS=3.557;HRun=0;HaplotypeScore=177.2353;InbreedingCoeff=0.0702;MQ=63.84;MQ0=25;MQRankSum=-7.759;QD=2.69;ReadPosRankSum=-6.286;VQSLOD=0.4683;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,135,2695	1/1:4,0:4:1.84:28,2,0	0/0:68,0:32:65.64:0,66,1207	0/0:104,0:52:67.50:0,68,1193	0/0:18,0:18:54.19:0,54,1094	0/1:22,0:22:5.60:6,0,211	0/0:17,0:17:9.50:0,9,174	0/1:51,7:51:99:326,0,1689	0/0:35,0:35:99:0,102,2002	0/0:32,0:32:93.32:0,93,1867	0/0:17,0:17:48.15:0,48,925	0/0:49,0:49:99:0,147,2856	0/0:38,0:38:99:0,114,2260	0/0:20,0:20:60.21:0,60,1203	0/0:46,0:46:99:0,135,2602	0/0:48,0:48:99:0,141,2765	0/0:35,1:36:99:0,102,1904	0/0:30,0:30:87.26:0,87,1686	0/0:17,0:14:42.01:0,42,596	0/1:11,0:11:38.43:38,0,106	0/1:12,8:20:67.62:82,0,68	0/0:14,0:14:42.14:0,42,851	0/0:14,0:14:36.59:0,37,728	0/0:48,0:48:99:0,132,2654	0/0:4,0:4:6.49:0,6,117	0/0:34,0:33:96.32:0,96,1907	0/1:34,0:34:43.63:44,0,464	0/0:12,0:12:36.12:0,36,721
chr10	105264799	.	GTCTGTCTGTC	G	2019.45	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=2.914;DP=807;FS=11.621;HRun=0;HaplotypeScore=239.2895;InbreedingCoeff=0.6690;MQ=57.47;MQ0=25;MQRankSum=-6.120;QD=16.03;ReadPosRankSum=-2.567;VQSLOD=0.9694;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,117,4730	1/1:9,0:9:1.95:15,2,0	0/0:39,0:15:9.64:0,10,387	0/0:61,0:27:20.20:0,20,332	0/0:27,0:27:59.73:0,60,2063	0/0:19,0:19:7.57:0,8,89	0/0:15,0:15:6.56:0,7,96	0/1:50,0:42:99:779,0,477	0/0:29,0:29:78.27:0,78,2997	0/0:28,0:28:54.17:0,54,2577	0/0:15,0:15:33.08:0,33,969	0/0:47,0:47:99:0,129,5205	0/0:35,0:35:99:0,100,3467	0/0:21,0:21:54.19:0,54,2130	0/0:44,0:44:99:0,123,4568	0/0:49,0:49:99:0,138,4823	0/0:35,0:35:93.32:0,93,3598	0/0:26,0:26:75.17:0,75,3204	1/1:16,1:13:8.93:496,9,0	1/1:6,1:7:2.94:18,3,0	1/1:16,1:17:3:89,3,0	0/0:16,0:15:42.10:0,42,1488	0/0:13,0:13:30.10:0,30,1069	0/0:48,0:48:99:0,123,4148	0/0:8,0:8:5.85:0,6,68	0/0:33,0:31:90.25:0,90,3047	1/1:25,1:26:33.02:771,33,0	0/0:14,0:13:36.12:0,36,1460
chr10	105264801	.	CTGTCTGTCTCTCTCTCTCTCTCTG	C	3436.91	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=2.715;DP=793;FS=11.274;HRun=0;HaplotypeScore=409.8322;InbreedingCoeff=0.5708;MQ=56.34;MQ0=23;MQRankSum=-7.410;QD=26.24;ReadPosRankSum=-2.606;VQSLOD=0.5583;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,120,9765	0/0:9,0:9:4.41:0,4,47	0/0:35,0:13:10.62:0,11,404	0/0:56,0:23:7.70:0,8,323	0/0:26,0:26:63.22:0,63,4665	0/1:18,0:18:11.13:11,0,204	0/0:13,0:13:5.09:0,5,340	0/1:48,0:40:99:777,0,1385	0/0:28,0:28:78.27:0,78,6031	0/0:28,0:28:78.25:0,78,5270	0/0:15,0:15:33.08:0,33,1750	0/0:45,0:45:99:0,129,10799	0/0:35,0:35:99:0,101,6725	0/0:21,0:21:57.20:0,57,4416	0/0:46,0:46:99:0,132,9857	0/0:48,0:48:99:0,138,10265	0/0:34,0:34:93.32:0,93,7063	0/0:26,0:26:75.17:0,75,6090	1/1:16,1:13:11.90:825,12,0	1/1:5,1:6:2.94:18,3,0	1/1:16,1:17:3.47:198,3,0	0/0:16,0:15:42.10:0,42,2715	0/0:16,0:16:39.13:0,39,2541	0/0:47,0:47:99:0,126,8768	0/0:8,0:8:6.02:0,6,214	0/0:36,0:34:99:0,99,6361	1/1:12,13:25:33:1608,33,0	0/0:14,0:13:39.13:0,39,3055
chr10	105264823	.	CTG	C	327.52	PASS	AB=1.000;AC=14;AF=0.259;AN=54;BaseQRankSum=9.349;DP=797;FS=0.572;HRun=0;HaplotypeScore=159.9171;InbreedingCoeff=0.6454;MQ=52.29;MQ0=13;MQRankSum=-5.890;QD=2.17;ReadPosRankSum=-3.404;VQSLOD=1.5976;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:68,0:68:94.91:0,95,1596	1/1:7,4:11:8.67:68,9,0	./.	0/0:9,0:2:0.47:0,0,1	0/0:36,0:36:77.45:0,77,1170	1/1:18,0:18:5.84:39,6,0	1/1:23,0:22:2.91:81,3,0	1/1:36,0:29:17.20:116,17,0	0/0:30,0:30:68.12:0,68,1088	0/0:33,0:32:75.76:0,76,1117	0/0:19,0:19:44.46:0,44,549	0/0:53,0:53:99:0,134,1990	0/0:32,0:32:80.12:0,80,1119	0/0:25,0:25:65.86:0,66,926	0/0:52,0:52:99:0,100,1876	0/0:49,0:49:99:0,117,1993	0/0:37,0:37:99:0,105,1414	0/0:33,0:33:74.96:0,75,1048	0/1:8,0:8:25.32:42,0,25	0/0:8,0:8:0.89:0,1,2	1/1:14,0:13:2.92:17,3,0	0/0:26,0:25:41.85:0,42,632	0/0:23,0:23:56.74:0,57,801	0/0:40,0:40:74.77:0,75,1385	1/1:14,1:15:3.01:44,3,0	0/0:50,0:47:99:0,122,1705	0/1:26,0:26:4.72:80,0,5	0/0:16,0:14:30.05:0,30,532
chr10	105264837	.	CTG	C	392	PASS	AB=0.928;AC=16;AF=0.308;AN=52;BaseQRankSum=5.450;DP=793;FS=4.256;HRun=0;HaplotypeScore=161.6859;InbreedingCoeff=0.1372;MQ=51.83;MQ0=13;MQRankSum=0.020;QD=1.03;ReadPosRankSum=-1.738;VQSLOD=1.8663;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:66,1:67:9.64:10,0,1001	1/1:10,0:10:8.38:40,8,0	./.	./.	0/0:36,2:38:31.60:0,32,856	1/1:16,0:16:2.84:14,3,0	0/1:25,0:24:1.90:2,0,12	0/0:33,0:25:12.10:0,12,67	0/0:23,3:26:10.43:0,10,522	0/1:36,6:41:99:100,0,524	0/0:18,0:18:9.63:0,10,493	0/0:46,4:50:78.22:0,78,1121	0/1:28,3:31:0.81:1,0,605	0/0:23,2:25:13.49:0,13,588	0/0:57,2:59:60.02:0,60,1544	0/0:51,1:52:0.06:0,0,1211	0/0:31,1:32:11.44:0,11,777	0/1:26,4:30:24.61:25,0,446	0/0:10,0:8:3.31:0,3,10	0/1:10,0:10:0:0,0,0	0/1:12,0:11:0:0,0,0	0/0:34,0:34:31.44:0,31,767	0/1:15,9:23:64.77:65,0,416	0/1:40,2:42:99:116,0,661	0/0:15,0:16:1.55:0,2,4	0/1:44,2:45:96.53:97,0,1044	1/1:25,0:25:11.30:64,11,0	0/0:15,0:12:18.06:0,18,263
chr10	105264850	.	TGTGTGTGTGTGTGTGC	T	1079.30	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=8.139;DP=799;FS=0.720;HRun=0;HaplotypeScore=330.3712;InbreedingCoeff=0.4851;MQ=52.19;MQ0=14;MQRankSum=-8.434;QD=6.87;ReadPosRankSum=-1.706;VQSLOD=1.6193;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,108,5574	1/1:11,0:11:14.17:124,14,0	0/0:12,0:4:12.04:0,12,401	0/0:19,0:8:21.07:0,21,709	0/0:38,0:38:78.27:0,78,4429	0/1:18,0:18:15.25:15,0,54	0/1:30,0:29:13.91:14,0,113	0/1:29,0:27:73.98:218,0,74	0/0:21,0:21:51.11:0,51,2517	0/0:40,0:38:75.37:0,75,4065	0/0:20,0:20:53.98:0,54,2899	0/0:47,0:47:97.17:0,97,5052	0/0:36,0:36:91.11:0,91,3727	0/0:23,0:23:54.18:0,54,3178	0/0:55,0:55:99:0,135,8148	0/0:49,0:49:99:0,121,7277	0/0:32,0:32:78.24:0,78,4305	0/0:25,0:25:51.14:0,51,2800	0/1:10,0:7:1.46:40,0,1	0/1:16,0:16:0:0,0,0	0/0:12,0:11:0.94:0,1,2	0/0:32,0:32:78.27:0,78,4833	0/0:23,0:22:42.12:0,42,2333	0/0:41,0:41:99:0,99,5030	0/1:17,0:17:0.01:0,0,0	0/0:45,0:43:99:0,123,6862	1/1:22,4:26:27.26:810,27,0	0/0:11,0:9:24.04:0,24,1219
chr10	105264852	.	TGTGTGTGTGTGTGC	T	1252.76	PASS	AB=0.887;AC=12;AF=0.214;AN=56;BaseQRankSum=8.807;DP=810;FS=2.239;HRun=0;HaplotypeScore=308.3441;InbreedingCoeff=0.6033;MQ=52.37;MQ0=15;MQRankSum=-7.807;QD=7.69;ReadPosRankSum=-2.849;VQSLOD=1.3427;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,111,4822	1/1:11,0:11:12.46:187,12,0	0/0:13,0:4:12.04:0,12,316	0/0:21,0:10:26.94:0,27,601	0/0:38,0:38:81.23:0,81,3864	0/1:16,0:16:11.12:11,0,17	0/1:32,0:31:44.91:121,0,45	1/1:32,0:30:5.76:392,6,0	0/0:21,0:21:51.10:0,51,2211	0/0:37,0:35:74.60:0,75,3634	0/0:21,0:21:56.91:0,57,2592	0/0:47,0:47:91.17:0,91,4432	0/0:39,0:39:99:0,100,3256	0/0:24,0:24:57.18:0,57,2853	0/0:56,0:56:99:0,138,7210	0/0:48,0:48:99:0,114,6361	0/0:32,0:32:78.25:0,78,3747	0/0:24,0:24:54.12:0,54,2473	0/1:10,0:7:0.59:19,0,1	0/1:3,14:17:0:0,0,0	0/0:12,0:11:0.94:0,1,2	0/0:32,0:32:77.29:0,77,4187	0/0:23,0:22:42.10:0,42,2014	0/0:42,0:42:92.77:0,93,4410	1/1:18,0:18:0.47:1,0,0	0/0:43,0:41:99:0,120,5938	1/1:21,6:27:19.32:667,19,0	0/0:11,0:9:24.03:0,24,1061
chr10	105264856	.	TGTGTGTGTGC	T	1306.35	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=9.706;DP=820;FS=8.017;HRun=0;HaplotypeScore=262.7939;InbreedingCoeff=0.8755;MQ=52.30;MQ0=13;MQRankSum=-7.333;QD=6.80;ReadPosRankSum=-6.373;VQSLOD=0.0733;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,110,3561	1/1:4,7:11:12.87:294,13,0	0/0:13,0:4:11.53:0,12,155	0/0:21,0:11:20.88:0,21,307	0/0:35,0:35:81.16:0,81,2785	1/1:16,0:16:8.95:89,9,0	1/1:36,0:35:29.82:310,30,0	1/1:38,0:36:36.81:226,37,0	0/0:21,0:21:39.09:0,39,1567	0/0:32,0:31:54.75:0,55,2590	0/0:20,0:20:50.97:0,51,1917	0/0:44,0:44:96.52:0,97,3315	0/0:37,0:37:80.70:0,81,2216	0/0:22,0:22:57.09:0,57,2147	0/0:58,0:58:99:0,138,5462	0/0:51,0:51:99:0,120,4694	0/0:33,0:33:80.68:0,81,2678	0/0:25,0:25:50.98:0,51,1811	1/1:12,0:9:8.45:48,8,0	0/1:16,0:16:0:0,0,0	1/1:15,0:14:2.45:23,2,0	0/0:33,0:33:86.21:0,86,3426	0/0:23,0:22:42.12:0,42,1402	0/0:42,0:42:68.76:0,69,3206	1/1:17,0:17:1.25:3,1,0	0/0:45,0:43:99:0,117,4291	1/1:31,0:31:27.51:497,28,0	0/0:11,0:9:18.06:0,18,670
chr10	105265761	.	C	CCT	992.52	PASS	AB=0.960;AC=9;AF=0.161;AN=56;BaseQRankSum=3.589;DP=404;FS=40.214;HRun=0;HaplotypeScore=60.5219;InbreedingCoeff=0.7458;MQ=70.13;MQ0=7;MQRankSum=-0.594;QD=12.10;ReadPosRankSum=6.315;VQSLOD=1.3639;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:47.92:0,48,425	1/1:0,7:9:9:146,9,0	0/1:23,0:12:14.08:14,0,88	0/0:32,0:17:14.24:0,14,193	0/0:12,0:12:11.97:0,12,97	1/1:2,12:14:18.03:288,18,0	1/1:3,16:19:7.10:412,7,0	0/0:10,0:10:15.23:0,15,114	0/0:7,0:5:11.98:0,12,113	0/0:17,0:17:44.92:0,45,404	0/0:12,0:12:25.70:0,26,210	0/0:17,0:17:41.77:0,42,387	0/0:15,0:14:31.46:0,31,246	0/0:12,0:12:26.94:0,27,222	0/0:16,0:16:26.97:0,27,261	0/0:7,0:6:18.02:0,18,189	0/0:21,0:21:38.81:0,39,393	0/0:17,0:16:44.94:0,45,405	0/0:5,0:5:8.99:0,9,76	0/0:5,0:4:9:0,9,76	0/0:22,0:22:40.67:0,41,288	0/0:14,0:13:20.93:0,21,210	0/0:7,0:7:20.93:0,21,178	0/0:12,0:12:18.01:0,18,185	1/1:2,11:16:12.65:283,13,0	0/0:21,0:20:47.94:0,48,399	0/0:15,0:14:39.09:0,39,282	0/0:8,0:8:6:0,6,52
chr10	105268426	.	T	TCC	2454.53	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=2.999;DP=618;FS=4.460;HRun=8;HaplotypeScore=89.2439;InbreedingCoeff=0.9617;MQ=86.05;MQ0=0;MQRankSum=-1.536;QD=16.81;ReadPosRankSum=-2.897;VQSLOD=1.4486;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:93.17:0,93,1027	0/0:8,0:8:18.03:0,18,201	0/0:22,0:22:47.88:0,48,509	0/0:29,0:29:50.06:0,50,476	0/0:18,0:18:39.09:0,39,435	1/1:3,17:21:48.16:743,48,0	1/1:6,25:35:65.66:957,66,0	1/1:18,1:24:20.90:225,21,0	0/0:24,0:24:57.13:0,57,635	0/0:24,0:24:60.16:0,60,668	0/0:16,0:18:38.77:0,39,469	0/0:34,0:34:78.15:0,78,859	0/0:21,0:21:57.11:0,57,615	0/0:23,0:25:65.64:0,66,692	0/0:23,0:23:63.16:0,63,702	0/0:23,0:23:63.14:0,63,693	0/0:35,0:36:92.96:0,93,1014	0/0:34,0:34:99:0,99,1094	1/1:12,0:18:14.81:132,15,0	1/1:13,0:13:9.87:101,10,0	1/1:8,1:16:8.96:105,9,0	0/0:16,0:16:42.10:0,42,468	0/0:14,0:14:36.10:0,36,399	0/0:32,0:32:66.12:0,66,724	1/1:2,5:8:15.05:237,15,0	0/0:25,0:25:61.94:0,62,651	1/1:4,0:11:15.03:155,15,0	0/0:3,0:3:9.02:0,9,100
chr10	105268630	.	T	TC	5083.05	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=8.094;DP=515;FS=5.326;HRun=6;HaplotypeScore=61.5607;InbreedingCoeff=0.9919;MQ=84.13;MQ0=0;MQRankSum=-2.296;QD=29.90;ReadPosRankSum=-1.215;VQSLOD=5.0945;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,111,1117	0/0:6,0:6:12.03:0,12,122	0/0:14,0:15:25.15:0,25,245	0/0:21,0:20:38.39:0,38,362	0/0:10,0:10:30.07:0,30,305	1/1:1,19:20:57.18:717,57,0	1/1:3,22:25:57.18:712,57,0	1/1:7,27:34:75.18:911,75,0	0/0:23,0:23:60.12:0,60,604	0/0:9,0:9:24.05:0,24,245	0/0:13,0:13:36.08:0,36,366	0/0:19,0:19:51.03:0,51,499	0/0:14,0:14:42.08:0,42,421	0/0:15,0:15:36.05:0,36,353	0/0:18,0:18:51.11:0,51,520	0/0:16,0:16:45.08:0,45,451	0/0:26,0:26:75.16:0,75,758	0/0:24,0:24:66.14:0,66,673	1/1:0,15:15:40.93:481,41,0	1/1:1,7:8:21.07:263,21,0	1/1:6,34:40:90.29:1132,90,0	0/0:13,0:13:36.06:0,36,358	0/0:11,0:11:30.05:0,30,296	0/0:20,0:20:60.14:0,60,611	1/1:3,13:16:39.12:491,39,0	0/0:19,0:19:54.12:0,54,551	1/1:1,11:12:30.10:377,30,0	0/0:9,0:9:18.03:0,18,183
chr10	105268772	.	CT	C	2025.87	PASS	AB=0.897;AC=19;AF=0.339;AN=56;BaseQRankSum=10.260;DP=449;FS=6.837;HRun=9;HaplotypeScore=50.5748;InbreedingCoeff=0.8408;MQ=58.75;MQ0=11;MQRankSum=-5.312;QD=12.58;ReadPosRankSum=2.317;VQSLOD=2.6891;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,2:23:5.31:0,5,567	0/0:4,0:4:12.04:0,12,138	1/1:14,0:3:1.55:4,2,0	0/1:23,2:10:6.15:6,0,61	0/0:27,1:27:66.20:0,66,761	1/1:3,18:21:48.02:439,48,0	1/1:2,13:15:39.02:356,39,0	1/1:8,10:17:23.99:220,24,0	0/0:13,1:14:5.66:0,6,319	0/0:25,0:24:47.08:0,47,488	0/0:20,0:20:45.12:0,45,508	0/0:16,0:15:36.05:0,36,384	0/0:10,0:10:27.06:0,27,293	0/0:8,0:8:21.06:0,21,242	0/0:9,0:9:21.06:0,21,242	0/0:12,0:12:27.08:0,27,312	0/0:34,0:34:88.04:0,88,1002	0/0:25,0:24:57.17:0,57,658	1/1:7,4:9:8.97:82,9,0	1/1:2,12:14:30.01:274,30,0	1/1:1,6:7:12:107,12,0	0/0:7,0:7:15.04:0,15,173	0/0:13,0:14:32.91:0,33,343	0/0:15,0:15:33.10:0,33,381	1/1:3,11:14:33.01:301,33,0	0/0:19,0:19:36.11:0,36,415	1/1:2,19:21:48.02:438,48,0	0/0:5,0:5:9.03:0,9,104
chr10	105269581	.	GTT	G	9132.32	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.219;DP=729;FS=1.656;HRun=5;HaplotypeScore=88.0218;InbreedingCoeff=0.9996;MQ=72.88;MQ0=0;MQRankSum=-1.959;QD=38.37;ReadPosRankSum=-0.043;VQSLOD=4.2317;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,157,2815	1/1:2,10:12:27.09:378,27,0	0/0:15,0:14:36.11:0,36,594	0/0:27,0:22:27.79:0,28,722	0/0:18,0:18:51.17:0,51,934	1/1:1,20:21:57.19:798,57,0	1/1:1,32:33:93.31:1302,93,0	1/1:3,34:37:99:1385,99,0	0/0:17,0:17:48.16:0,48,879	0/0:25,0:25:75.26:0,75,1374	0/0:18,0:18:54.19:0,54,979	0/0:40,0:40:99:0,114,2062	0/0:25,0:25:75.26:0,75,1367	0/0:21,0:21:60.19:0,60,1067	0/0:35,0:35:99:0,99,1786	0/0:30,0:30:84.29:0,84,1537	0/0:35,0:35:99:0,105,1902	0/0:22,0:22:66.23:0,66,1210	1/1:1,23:24:66.21:908,66,0	1/1:0,20:20:60.20:834,60,0	1/1:1,39:40:99:1554,111,0	0/0:15,0:15:45.13:0,45,758	0/0:22,0:22:66.23:0,66,1210	0/0:35,0:35:99:0,102,1830	1/1:3,24:27:72.24:1008,72,0	0/0:28,0:28:81.28:0,81,1482	1/1:0,24:24:69.23:966,69,0	0/0:10,0:10:30.10:0,30,550
chr10	105269831	.	CT	C	8391.37	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.981;DP=745;FS=0.948;HRun=1;HaplotypeScore=69.9882;InbreedingCoeff=1.0000;MQ=89.59;MQ0=0;MQRankSum=-3.237;QD=39.21;ReadPosRankSum=-1.483;VQSLOD=4.8515;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1867	0/0:19,0:19:57.06:0,57,830	0/0:31,0:31:90.27:0,90,1352	0/0:24,0:24:63:0,63,916	0/0:22,0:22:66.22:0,66,1041	1/1:0,18:18:54.18:754,54,0	1/1:0,27:27:72.24:1006,72,0	1/1:0,39:39:99:1499,108,0	0/0:26,0:26:78.25:0,78,1224	0/0:30,0:30:87.30:0,87,1391	0/0:20,0:20:60.19:0,60,935	0/0:42,0:42:99:0,126,1992	0/0:31,0:31:93.32:0,93,1484	0/0:21,0:21:63.21:0,63,1007	0/0:31,0:31:90.31:0,90,1437	0/0:32,0:32:96.31:0,96,1512	0/0:23,0:23:69.24:0,69,1103	0/0:18,0:18:54.18:0,54,863	1/1:0,14:14:42.13:559,42,0	1/1:0,27:27:78.21:1055,78,0	1/1:0,43:43:99:1634,117,0	0/0:16,0:16:48.15:0,48,740	0/0:18,0:18:54.18:0,54,863	0/0:36,0:36:99:0,108,1717	1/1:0,24:24:72.24:1005,72,0	0/0:33,0:33:99:0,99,1541	1/1:0,22:22:63.21:879,63,0	0/0:18,0:18:54.18:0,54,860
chr10	105270062	.	T	TC	9030.20	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-15.573;DP=721;FS=1.736;HRun=2;HaplotypeScore=65.9942;InbreedingCoeff=0.9981;MQ=85.99;MQ0=0;MQRankSum=-6.638;QD=42.40;ReadPosRankSum=0.957;VQSLOD=4.5717;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1842	1/1:0,8:8:24.08:384,24,0	0/0:27,0:27:80.96:0,81,992	0/0:18,0:18:48:0,48,621	0/0:25,0:25:72.23:0,72,990	1/1:0,19:19:51.17:815,51,0	1/1:2,33:35:90.31:1439,90,0	1/1:2,28:30:84.22:1224,84,0	0/0:22,0:22:66.22:0,66,917	0/0:33,0:32:96.30:0,96,1299	0/0:10,0:10:27.09:0,27,376	0/0:45,0:45:99:0,135,1857	0/0:35,0:35:99:0,99,1348	0/0:30,0:30:81.26:0,81,1115	0/0:36,0:36:99:0,108,1456	0/0:26,0:25:75.24:0,75,1032	0/0:36,0:36:99:0,105,1446	0/0:27,0:27:75.21:0,75,1025	1/1:1,15:17:48.16:755,48,0	1/1:0,14:14:42.14:672,42,0	1/1:1,57:58:99:2350,148,0	0/0:17,0:17:51.14:0,51,665	0/0:10,0:10:27.09:0,27,369	0/0:27,0:27:81.26:0,81,1116	1/1:0,15:15:39.13:623,39,0	0/0:32,0:32:96.31:0,96,1327	1/1:0,17:17:48.16:767,48,0	0/0:7,0:7:18.06:0,18,252
chr10	105271276	.	AACATACAT	A	5505.08	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.690;DP=727;FS=5.290;HRun=0;HaplotypeScore=176.3829;InbreedingCoeff=0.9641;MQ=56.34;MQ0=7;MQRankSum=-8.862;QD=26.59;ReadPosRankSum=-2.838;VQSLOD=3.8478;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:69.24:0,69,2622	1/1:1,9:10:16.56:335,17,0	0/0:18,0:10:3.48:0,3,109	0/0:21,0:12:12:0,12,150	0/0:36,0:36:81.28:0,81,2644	1/1:7,14:21:30:605,30,0	1/1:7,18:25:17.93:292,18,0	1/1:14,16:30:48.10:616,48,0	0/0:21,0:21:42.14:0,42,1702	0/0:41,0:41:99:0,102,3135	0/0:26,0:26:66.23:0,66,2509	0/0:44,0:44:99:0,117,4215	0/0:18,0:18:45.15:0,45,1472	0/0:18,0:18:42.14:0,42,1625	0/0:28,0:29:60.19:0,60,2012	0/0:31,0:31:81.26:0,81,2907	0/0:34,0:34:63.56:0,64,2118	0/0:35,0:35:69.13:0,69,2129	1/1:8,9:17:27.07:553,27,0	1/1:4,23:27:47.95:896,48,0	1/1:20,0:20:15.01:253,15,0	0/0:11,0:11:27.09:0,27,1056	0/0:29,0:29:63.19:0,63,1872	0/0:24,0:24:60.19:0,60,1890	1/1:7,24:31:38.96:773,39,0	0/0:35,0:35:96.33:0,96,3589	1/1:3,23:26:48.12:1182,48,0	0/0:14,0:14:39.13:0,39,1312
chr10	105273174	.	A	ACAG	10723.60	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=4.914;DP=637;FS=2.395;HRun=0;HaplotypeScore=90.6503;InbreedingCoeff=0.9984;MQ=64.84;MQ0=2;MQRankSum=-4.218;QD=57.04;ReadPosRankSum=-0.876;VQSLOD=6.6996;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,1964	0/0:7,0:7:18.06:0,18,318	0/0:22,0:19:49.69:0,50,789	0/0:12,0:12:26.64:0,27,466	0/0:21,0:21:63.22:0,63,1111	1/1:2,16:18:39.13:921,39,0	1/1:6,25:30:75.26:1757,75,0	1/1:7,19:27:72.21:1542,72,0	0/0:15,0:15:45.15:0,45,794	0/0:23,0:22:66.22:0,66,1141	0/0:16,0:16:48.16:0,48,843	0/0:26,0:26:78.27:0,78,1361	0/0:19,0:19:57.18:0,57,978	0/0:20,0:20:60.21:0,60,1048	0/0:33,0:33:96.33:0,96,1674	0/0:24,0:24:69.22:0,69,1168	0/0:27,0:27:81.28:0,81,1429	0/0:49,0:49:99:0,141,2414	1/1:5,13:20:57.06:1203,57,0	1/1:3,14:18:45.15:1052,45,0	1/1:4,24:28:66.23:1557,66,0	0/0:14,0:14:42.11:0,42,684	0/0:16,0:16:45.15:0,45,787	0/0:28,0:28:84.29:0,84,1482	1/1:2,15:18:42.14:992,42,0	0/0:23,0:23:66.23:0,66,1165	1/1:4,24:27:72.25:1700,72,0	0/0:13,0:13:39.12:0,39,653
chr10	105273379	.	TACACACACACACAC	T	595.28	PASS	AB=0.917;AC=11;AF=0.220;AN=50;BaseQRankSum=3.805;DP=532;FS=1.612;HRun=0;HaplotypeScore=193.8298;InbreedingCoeff=0.4420;MQ=62.26;MQ0=16;MQRankSum=-1.638;QD=4.41;ReadPosRankSum=0.967;VQSLOD=2.7778;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:45.15:0,45,2530	0/0:9,0:9:2.99:0,3,24	./.	./.	0/0:16,0:15:12.04:0,12,643	1/1:7,6:12:3.01:116,3,0	1/1:28,2:30:2.28:38,2,0	0/0:27,0:24:0.89:0,1,2	0/0:21,0:21:24.08:0,24,1356	0/0:18,0:15:12.04:0,12,611	0/0:12,0:11:9.03:0,9,466	0/0:19,0:20:14.99:0,15,252	0/0:14,0:14:24.08:0,24,1143	0/0:17,0:17:15.05:0,15,713	0/0:17,0:16:24.07:0,24,1340	0/0:23,0:22:12.04:0,12,637	0/0:30,0:28:30.10:0,30,1436	0/0:23,0:24:43.70:0,44,2123	0/1:15,1:15:18.53:109,0,19	1/1:14,2:16:5.98:136,6,0	1/1:32,0:30:5.85:57,6,0	0/0:10,0:10:9.02:0,9,311	0/0:8,0:7:6.02:0,6,276	0/0:38,0:36:45.14:0,45,2325	0/1:11,0:11:2.95:59,0,3	0/0:11,0:11:12.04:0,12,662	0/1:13,4:15:19.67:217,0,20	./.
chr10	105275878	.	G	GA	3922.29	PASS	AB=0.979;AC=15;AF=0.268;AN=56;BaseQRankSum=-8.257;DP=630;FS=4.510;HRun=0;HaplotypeScore=78.4226;InbreedingCoeff=0.5636;MQ=75.53;MQ0=2;MQRankSum=0.700;QD=16.69;ReadPosRankSum=-2.731;VQSLOD=4.7299;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:67.25:0,67,740	0/0:13,0:13:32.74:0,33,273	0/1:22,0:18:12.74:13,0,176	0/1:14,0:12:37.81:38,0,69	0/0:22,0:22:55.79:0,56,463	0/1:18,0:18:14.07:80,0,14	0/1:31,0:31:77.08:82,0,77	1/1:1,25:26:71.93:659,72,0	0/0:27,0:27:81.08:0,81,987	0/0:21,0:21:53.89:0,54,550	0/0:13,0:13:38.90:0,39,403	0/0:30,0:30:90.09:0,90,1047	0/0:25,0:25:71.73:0,72,796	0/0:26,0:26:57.59:0,58,682	0/0:28,0:28:80.26:0,80,960	0/0:19,0:19:54.01:0,54,617	0/0:33,0:32:87.02:0,87,1065	0/0:10,0:10:30.10:0,30,414	1/1:5,16:21:55.92:683,56,0	1/1:4,14:20:41.91:455,42,0	1/1:6,20:26:50.55:656,51,0	0/0:16,0:16:35.96:0,36,383	0/0:25,0:25:65.74:0,66,654	0/0:32,0:32:86.77:0,87,1016	0/1:14,0:14:9.19:83,0,9	0/0:21,0:21:49:0,49,557	1/1:3,35:40:88.60:1174,89,0	0/0:8,0:8:20.92:0,21,215
chr10	105276400	.	GC	G	309.75	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.358;DP=597;FS=2.664;HRun=1;HaplotypeScore=57.7277;InbreedingCoeff=0.9643;MQ=73.91;MQ0=1;MQRankSum=-0.965;QD=30.97;ReadPosRankSum=-0.999;VQSLOD=3.0800;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.29:0,96,1480	1/1:0,10:10:30.09:404,30,0	0/0:13,0:13:36.11:0,36,537	0/0:8,0:8:20.82:0,21,259	0/0:17,0:17:48.16:0,48,753	0/0:16,0:16:48.16:0,48,767	0/0:25,0:25:75.24:0,75,1171	0/0:24,0:24:72.24:0,72,1129	0/0:17,0:17:51.17:0,51,814	0/0:21,0:21:63.19:0,63,946	0/0:4,0:4:12.04:0,12,192	0/0:41,0:41:99:0,120,1893	0/0:12,0:12:36.11:0,36,549	0/0:27,0:27:81.26:0,81,1269	0/0:18,0:18:54.17:0,54,840	0/0:14,0:14:42.13:0,42,648	0/0:35,0:35:99:0,105,1617	0/0:36,0:36:99:0,108,1671	0/0:21,0:21:63.16:0,63,935	0/0:10,0:10:26.37:0,26,430	0/0:47,0:47:99:0,138,2154	0/0:17,0:17:48.15:0,48,729	0/0:14,0:14:39.13:0,39,623	0/0:32,0:31:93.30:0,93,1462	0/0:27,0:27:78.27:0,78,1243	0/0:25,0:25:75.26:0,75,1198	0/0:18,0:18:54.17:0,54,840	0/0:15,0:15:45.14:0,45,685
chr10	105276840	.	C	CT	7160.21	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-12.606;DP=546;FS=9.995;HRun=0;HaplotypeScore=51.6184;InbreedingCoeff=0.9955;MQ=87.05;MQ0=0;MQRankSum=-2.419;QD=42.62;ReadPosRankSum=0.688;VQSLOD=4.7097;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.20:0,84,1100	0/0:6,0:6:18.06:0,18,252	0/0:15,0:15:31.99:0,32,466	0/0:24,0:24:33.68:0,34,886	0/0:8,0:8:24.08:0,24,335	1/1:1,15:16:45.15:719,45,0	1/1:1,28:29:81.28:1295,81,0	1/1:1,24:25:72.21:1086,72,0	0/0:15,0:15:45.15:0,45,628	0/0:14,0:14:39.13:0,39,545	0/0:8,0:8:24.07:0,24,320	0/0:35,0:35:99:0,105,1416	0/0:23,0:23:69.22:0,69,948	0/0:20,0:20:57.19:0,57,795	0/0:21,0:21:63.21:0,63,881	0/0:25,0:24:72.17:0,72,965	0/0:29,0:29:84.28:0,84,1171	0/0:31,0:31:84.21:0,84,1130	1/1:2,14:16:45.09:656,45,0	1/1:0,8:8:24.08:384,24,0	1/1:0,45:45:99:1678,105,0	0/0:14,0:14:42.14:0,42,587	0/0:7,0:7:21.07:0,21,294	0/0:35,0:35:99:0,102,1407	1/1:0,15:15:45.15:719,45,0	0/0:14,0:14:42.14:0,42,587	1/1:0,14:14:39.13:623,39,0	0/0:6,0:6:18.06:0,18,248
chr10	105277587	.	A	AAGAAAC	14901.02	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-10.101;DP=733;FS=2.359;HRun=0;HaplotypeScore=143.5641;InbreedingCoeff=0.9983;MQ=78.98;MQ0=0;MQRankSum=-15.782;QD=76.81;ReadPosRankSum=-4.231;VQSLOD=4.7607;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,2969	1/1:0,6:7:18.06:647,18,0	0/0:28,0:28:51.48:0,51,1286	0/0:22,0:22:39.21:0,39,1239	0/0:16,0:16:48.08:0,48,1067	1/1:2,18:23:50.99:1745,51,0	1/1:6,21:29:69.24:2358,69,0	1/1:13,22:39:99:3128,99,0	0/0:29,0:29:84.29:0,84,1944	0/0:28,0:28:84.29:0,84,2019	0/0:16,0:16:45.15:0,45,1029	0/0:36,0:36:99:0,105,2495	0/0:41,0:41:99:0,120,2770	0/0:40,0:40:99:0,114,2622	0/0:32,0:32:90.31:0,90,2106	0/0:43,0:43:99:0,126,2860	0/0:36,0:36:99:0,108,2489	0/0:26,0:26:75.24:0,75,1697	1/1:2,7:11:30.09:849,30,0	1/1:4,12:17:42.10:1285,42,0	1/1:4,15:22:42.10:1389,42,0	0/0:11,0:11:33.09:0,33,666	0/0:20,0:20:57.20:0,57,1293	0/0:32,0:32:93.30:0,93,2131	1/1:3,12:17:39.13:1378,39,0	0/0:30,0:30:87.29:0,87,1991	1/1:2,23:28:60.21:2123,60,0	0/0:8,0:8:24.08:0,24,547
chr10	105282077	.	C	CT	843.35	PASS	AB=0.834;AC=16;AF=0.286;AN=56;BaseQRankSum=2.115;DP=483;FS=0.000;HRun=14;HaplotypeScore=59.6666;InbreedingCoeff=0.5199;MQ=63.88;MQ0=24;MQRankSum=-0.238;QD=4.17;ReadPosRankSum=-0.790;VQSLOD=0.5135;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:42.80:0,43,273	0/0:2,0:2:2.95:0,3,19	0/1:42,0:16:16.17:16,0,29	0/0:32,0:11:8.80:0,9,57	0/0:9,0:9:12.78:0,13,62	1/1:14,2:21:29.65:172,30,0	0/1:15,0:20:19.87:107,0,20	1/1:18,13:29:27.86:196,28,0	0/0:9,0:10:3.83:0,4,108	0/0:18,0:18:25.16:0,25,151	0/0:5,0:5:10.90:0,11,63	0/1:19,2:21:11.86:12,0,167	0/0:8,0:8:14.75:0,15,96	0/0:12,1:14:19.71:0,20,121	0/0:17,0:18:46.50:0,46,281	0/0:8,0:9:21.77:0,22,121	0/0:26,0:26:42.82:0,43,285	0/0:24,6:33:7.30:0,7,201	0/1:10,12:21:7.40:147,0,7	1/1:1,5:7:14.64:106,15,0	1/1:1,3:4:3:26,3,0	0/0:8,0:6:8.71:0,9,55	0/0:6,0:6:8.82:0,9,57	0/0:15,0:15:31.83:0,32,197	1/1:7,1:14:10.24:58,10,0	0/0:13,0:13:16.79:0,17,104	1/1:2,14:17:21:184,21,0	0/0:15,1:15:7.23:0,7,158
chr10	105282338	.	C	CG	244.77	PASS	AB=0.815;AC=7;AF=0.135;AN=52;BaseQRankSum=5.105;DP=263;FS=1.214;HRun=2;HaplotypeScore=38.6610;InbreedingCoeff=0.4529;MQ=58.44;MQ0=2;MQRankSum=-2.188;QD=8.44;ReadPosRankSum=0.236;VQSLOD=0.9809;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:36.11:0,36,446	0/0:1,0:1:0:0,0,0	0/0:8,0:6:18:0,18,191	0/0:9,0:7:12.03:0,12,137	./.	0/0:2,0:2:6.02:0,6,74	0/0:35,0:37:43.34:0,43,879	1/1:0,3:3:9.03:129,9,0	0/0:9,0:9:21.05:0,21,247	0/0:9,0:9:21.07:0,21,259	0/1:1,0:1:0:0,0,0	0/0:12,0:12:27.08:0,27,333	0/0:4,0:4:12.04:0,12,148	0/0:10,0:10:27.05:0,27,307	0/0:7,0:7:18.06:0,18,223	0/0:7,0:7:18.06:0,18,223	0/0:21,0:21:60.19:0,60,743	0/0:22,0:22:66.19:0,66,803	0/1:4,2:6:71.44:71,0,73	./.	0/1:9,7:15:31.49:115,0,31	0/0:2,0:2:6.02:0,6,74	0/0:4,0:4:9.03:0,9,112	0/0:35,0:35:99:0,102,1264	0/0:6,0:6:15.03:0,15,173	0/0:9,0:9:21.02:0,21,260	1/1:1,2:3:4.56:47,5,0	0/0:4,0:4:9.03:0,9,111
chr10	105282373	.	CG	C	344.26	PASS	AB=0.643;AC=5;AF=0.104;AN=48;BaseQRankSum=5.070;DP=178;FS=2.289;HRun=3;HaplotypeScore=32.6294;InbreedingCoeff=0.3015;MQ=58.52;MQ0=2;MQRankSum=-4.728;QD=11.48;ReadPosRankSum=-1.665;VQSLOD=1.0014;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:21.07:0,21,301	./.	./.	0/0:6,0:3:5.55:0,6,85	./.	1/1:0,2:2:3.01:37,3,0	0/1:12,15:27:44.63:371,0,45	0/0:3,0:1:3:0,3,29	0/0:4,0:4:9.03:0,9,130	0/0:6,0:6:17.79:0,18,214	0/0:1,0:1:0.89:0,1,2	0/0:9,0:9:27.07:0,27,368	0/0:6,0:6:15.05:0,15,216	0/0:4,0:4:12.04:0,12,173	0/0:3,0:3:6.02:0,6,86	0/0:5,0:5:15.05:0,15,216	0/0:20,0:20:51.16:0,51,714	0/0:16,0:16:42.12:0,42,564	0/0:4,0:3:8.76:0,9,98	./.	0/0:19,0:19:29.94:0,30,278	0/0:1,0:1:3.01:0,3,43	0/0:2,0:2:6.02:0,6,86	0/0:24,0:24:63.16:0,63,864	1/1:0,1:1:3.01:37,3,0	0/0:2,0:2:6.02:0,6,73	0/0:2,0:2:2.72:0,3,28	0/0:2,0:2:3.01:0,3,42
chr10	105282379	.	C	CG	589.44	PASS	AC=10;AF=0.208;AN=48;BaseQRankSum=2.238;DP=170;FS=0.946;HRun=2;HaplotypeScore=35.6329;InbreedingCoeff=0.6285;MQ=59.77;MQ0=1;MQRankSum=-0.090;QD=22.67;ReadPosRankSum=-1.763;VQSLOD=2.9450;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:18.06:0,18,223	1/1:1,0:1:3.01:41,3,0	./.	0/0:6,0:3:8.99:0,9,95	./.	0/0:2,0:3:3:0,3,26	0/0:28,0:29:54.07:0,54,523	1/1:1,1:1:3.01:43,3,0	0/0:3,0:3:6.02:0,6,74	0/0:7,0:7:17.99:0,18,204	0/0:2,0:2:2.27:0,2,23	0/0:9,0:9:27.08:0,27,334	0/0:5,0:5:15.05:0,15,186	0/0:6,0:6:12.04:0,12,148	0/0:3,0:3:6.02:0,6,74	0/0:4,0:4:9.03:0,9,111	0/0:16,0:16:45.07:0,45,538	0/0:16,0:16:48.15:0,48,592	1/1:0,3:4:12.04:159,12,0	./.	1/1:3,14:17:30.10:426,30,0	0/0:1,0:1:3.01:0,3,37	0/0:2,0:2:6.02:0,6,74	0/0:19,0:19:54.15:0,54,656	0/0:2,0:2:5.99:0,6,49	0/0:3,0:3:9.03:0,9,111	1/1:1,1:2:5.95:61,6,0	./.
chr10	105282384	.	C	CA	898.80	PASS	AB=0.556;AC=5;AF=0.100;AN=50;BaseQRankSum=2.035;DP=176;FS=5.732;HRun=0;HaplotypeScore=33.0507;InbreedingCoeff=0.3225;MQ=66.18;MQ0=1;MQRankSum=-4.441;QD=26.44;ReadPosRankSum=-1.880;VQSLOD=3.4011;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:21.06:0,21,275	0/0:1,0:1:3.01:0,3,30	0/0:1,0:1:3:0,3,27	0/0:5,0:3:9:0,9,104	./.	1/1:0,2:2:6.02:96,6,0	0/1:6,24:30:19.07:815,0,19	0/0:1,1:1:3.01:0,3,34	0/0:3,0:3:9.03:0,9,126	0/0:7,0:7:21.07:0,21,289	0/0:2,0:2:3.01:0,3,42	0/0:10,0:10:30.09:0,30,401	0/0:6,0:6:18.06:0,18,251	0/0:7,0:7:21.07:0,21,293	0/0:2,0:2:6.02:0,6,84	0/0:2,0:2:6.02:0,6,84	0/0:16,0:16:45.08:0,45,586	0/0:17,0:17:48.16:0,48,659	0/0:5,0:5:15.02:0,15,159	./.	0/0:17,0:17:28.27:0,28,244	0/0:2,0:2:6.01:0,6,67	0/0:2,0:2:6.02:0,6,79	0/0:19,0:19:57.06:0,57,767	1/1:0,2:2:6.02:95,6,0	0/0:4,0:4:12.02:0,12,148	0/0:2,0:2:0.03:0,0,20	./.
chr10	105282787	.	CT	C	664.23	PASS	AB=0.899;AC=11;AF=0.196;AN=56;BaseQRankSum=2.408;DP=514;FS=12.007;HRun=14;HaplotypeScore=70.9811;InbreedingCoeff=0.6266;MQ=65.50;MQ0=3;MQRankSum=-0.106;QD=6.33;ReadPosRankSum=0.584;VQSLOD=1.2446;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:29:65.83:0,66,572	0/0:4,0:10:14.75:0,15,105	0/1:12,0:10:11.58:12,0,41	0/1:11,1:8:8.04:15,0,8	0/0:11,0:12:29.86:0,30,260	0/0:12,0:24:56.95:0,57,320	0/0:5,0:20:34.20:0,34,178	1/1:8,13:22:34.63:231,35,0	0/0:16,0:16:32.95:0,33,283	0/0:21,0:25:51.78:0,52,428	0/0:12,0:13:26.85:0,27,230	0/0:20,0:20:37.78:0,38,326	0/0:15,0:15:30.43:0,30,262	0/0:28,0:28:45.33:0,45,375	0/0:20,1:22:41.86:0,42,369	0/0:19,2:21:0.91:0,1,285	0/0:29,0:29:50.98:0,51,459	0/0:21,0:21:47.91:0,48,409	0/1:12,5:16:32.20:90,0,32	1/1:2,4:7:14.73:97,15,0	1/1:6,4:10:11.83:82,12,0	0/0:12,0:12:15.01:0,15,135	0/0:15,0:15:26.93:0,27,238	0/0:18,2:20:21.87:0,22,321	0/0:4,0:25:46.37:0,46,282	0/0:22,0:22:38.83:0,39,332	1/1:2,22:25:24.76:305,25,0	0/0:10,0:9:20.99:0,21,185
chr10	105283000	.	TCA	T	6193.25	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.812;DP=671;FS=1.510;HRun=0;HaplotypeScore=83.1784;InbreedingCoeff=0.9977;MQ=75.68;MQ0=0;MQRankSum=-1.996;QD=39.20;ReadPosRankSum=0.649;VQSLOD=6.7620;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.33:0,96,1759	1/1:1,8:9:27.09:387,27,0	0/0:23,0:23:62.29:0,62,1136	0/0:16,0:16:40.18:0,40,751	0/0:19,0:19:57.18:0,57,1013	0/0:17,0:17:48.16:0,48,875	0/0:25,0:25:72.23:0,72,1281	1/1:0,30:30:90.24:1216,90,0	0/0:13,0:13:36.11:0,36,620	0/0:27,0:27:72.24:0,72,1291	0/0:16,0:16:45.15:0,45,824	0/0:33,0:33:99:0,99,1806	0/0:13,0:13:39.13:0,39,713	0/0:29,0:29:84.29:0,84,1530	0/0:20,0:20:57.20:0,57,1039	0/0:28,0:28:72.21:0,72,1249	0/0:41,0:41:99:0,111,1959	0/0:32,0:32:93.30:0,93,1657	1/1:0,16:15:45.15:640,45,0	1/1:0,8:8:18.06:258,18,0	1/1:2,55:57:99:2232,156,0	0/0:13,0:13:36.12:0,36,660	0/0:8,0:8:24.08:0,24,430	0/0:43,0:43:99:0,111,1962	0/0:19,0:19:57.18:0,57,1002	0/0:28,0:28:78.26:0,78,1389	1/1:0,38:38:99:1461,102,0	0/0:16,0:16:45.15:0,45,824
chr10	105283716	.	TCTCCCCCC	T	229.31	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.866;DP=506;FS=1.859;HRun=0;HaplotypeScore=133.8881;InbreedingCoeff=0.8400;MQ=81.05;MQ0=0;MQRankSum=-3.397;QD=25.48;ReadPosRankSum=2.018;VQSLOD=3.4389;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.15:0,69,2360	1/1:1,8:9:12.04:315,12,0	0/0:23,0:23:47.07:0,47,1278	0/0:19,0:19:42.13:0,42,1157	0/0:19,0:19:57.18:0,57,2171	0/0:15,0:16:36.12:0,36,1257	0/0:30,0:30:63.13:0,63,2029	0/0:15,0:15:24.04:0,24,546	0/0:18,0:18:48.15:0,48,1802	0/0:14,0:14:39.12:0,39,1388	0/0:8,0:8:21.06:0,21,748	0/0:40,0:40:99:0,102,4001	0/0:26,0:26:59.84:0,60,2350	0/0:26,0:26:66.12:0,66,2693	0/0:22,0:22:60.20:0,60,2395	0/0:18,0:18:54.14:0,54,1984	0/0:20,0:20:45.13:0,45,1755	0/0:19,0:19:48.16:0,48,1991	0/0:3,0:3:6.02:0,6,209	0/0:7,0:7:15:0,15,311	0/0:15,0:15:15.03:0,15,443	0/0:15,0:15:36.10:0,36,1397	0/0:16,0:16:48.16:0,48,1961	0/0:27,0:27:69.22:0,69,2688	0/0:18,0:18:33.11:0,33,1123	0/0:15,0:15:39.12:0,39,1413	0/0:11,0:11:21.05:0,21,651	0/0:13,0:13:30.03:0,30,1170
chr10	105283718	.	T	TC	1631.01	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-1.830;DP=516;FS=11.117;HRun=7;HaplotypeScore=61.0475;InbreedingCoeff=0.9233;MQ=79.43;MQ0=0;MQRankSum=-0.724;QD=13.48;ReadPosRankSum=0.086;VQSLOD=1.8682;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.11:0,69,665	0/0:9,0:9:8.15:0,8,25	0/0:23,0:23:2.90:0,3,296	0/0:19,0:19:28.84:0,29,245	0/0:19,0:19:54.08:0,54,521	1/1:1,16:17:35.98:413,36,0	1/1:5,24:29:60.18:721,60,0	1/1:9,0:17:14.52:67,15,0	0/0:17,0:17:48.08:0,48,463	0/0:14,0:14:36.05:0,36,345	0/0:7,0:7:21.03:0,21,203	0/0:41,0:41:99:0,102,979	0/0:26,0:26:60.06:0,60,579	0/0:27,0:27:66.10:0,66,637	0/0:23,0:23:57.01:0,57,550	0/0:19,0:19:57.08:0,57,544	0/0:20,0:20:45.04:0,45,427	0/0:18,0:18:45.07:0,45,435	1/1:2,0:6:11.32:53,11,0	1/1:0,0:6:5.75:30,6,0	1/1:5,0:17:11.50:58,12,0	0/0:17,0:17:39.04:0,39,372	0/0:17,0:17:51.06:0,51,482	0/0:27,0:27:69.11:0,69,666	1/1:2,17:19:33.10:399,33,0	0/0:15,0:15:36.05:0,36,348	1/1:1,0:10:17.25:88,17,0	0/0:14,0:14:33:0,33,309
chr10	105284047	.	GT	G	2924.19	PASS	AB=0.586;AC=17;AF=0.304;AN=56;BaseQRankSum=9.689;DP=649;FS=0.363;HRun=11;HaplotypeScore=71.2465;InbreedingCoeff=0.9100;MQ=71.86;MQ0=4;MQRankSum=0.335;QD=16.16;ReadPosRankSum=-0.574;VQSLOD=4.1371;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.66:0,97,998	1/1:4,6:10:17.96:147,18,0	0/0:47,0:33:21.45:0,21,319	0/0:29,0:16:16.32:0,16,107	0/0:25,1:26:44.37:0,44,643	1/1:3,21:24:62.92:517,63,0	1/1:3,13:17:32:252,32,0	1/1:8,27:35:74.69:599,75,0	0/0:19,0:19:56.50:0,56,577	0/0:25,0:25:48.12:0,48,512	0/0:15,0:15:33.08:0,33,350	0/0:22,0:22:63.16:0,63,670	0/0:19,0:19:51.13:0,51,543	0/0:16,0:18:44.98:0,45,462	0/0:26,0:26:63.11:0,63,653	0/0:27,0:28:72.05:0,72,749	0/0:25,0:25:66.17:0,66,703	0/0:14,1:15:17.50:0,17,375	1/1:4,19:23:53.86:434,54,0	1/1:0,9:9:26.97:222,27,0	1/1:3,12:15:29.95:246,30,0	0/0:21,0:21:54.12:0,54,561	0/0:14,0:15:39.08:0,39,404	0/0:30,4:35:41.03:0,41,812	0/1:5,12:17:28.03:210,0,28	0/0:30,1:31:48.25:0,48,693	1/1:5,26:31:36.90:504,37,0	0/0:13,0:14:39.05:0,39,397
chr10	105284746	.	CAGA	C	1526.94	PASS	AB=0.611;AC=10;AF=0.179;AN=56;BaseQRankSum=12.623;DP=646;FS=6.044;HRun=0;HaplotypeScore=128.2391;InbreedingCoeff=0.6949;MQ=88.79;MQ0=0;MQRankSum=-11.853;QD=18.62;ReadPosRankSum=-0.552;VQSLOD=3.2247;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,2654	1/1:1,7:8:24:219,24,0	0/0:23,0:23:63.18:0,63,1332	0/0:28,0:28:77.74:0,78,1728	0/0:28,0:28:78.10:0,78,1922	0/0:22,0:22:66.21:0,66,1574	0/0:37,0:37:99:0,111,2671	0/1:5,12:17:31.46:350,0,31	0/0:31,0:31:93.32:0,93,2234	0/0:23,0:23:69.24:0,69,1627	0/0:10,0:10:30.10:0,30,728	0/0:35,0:35:99:0,105,2570	0/0:30,0:30:90.25:0,90,2114	0/0:24,0:24:69.24:0,69,1693	0/0:28,0:28:84.29:0,84,2070	0/0:26,0:26:78.27:0,78,1918	0/0:38,0:38:99:0,114,2756	0/0:23,0:23:69.22:0,69,1594	0/1:6,8:14:92.94:232,0,93	1/1:1,6:7:8.69:140,9,0	1/1:8,13:20:4.56:363,5,0	0/0:16,0:16:48.16:0,48,1183	0/0:17,0:17:51.18:0,51,1253	0/0:43,0:43:99:0,129,3121	0/0:11,0:11:33.11:0,33,813	0/0:29,0:29:84.28:0,84,2009	1/1:2,12:14:41.99:382,42,0	0/0:4,0:4:12.04:0,12,296
chr10	105284750	.	CAG	C	798.44	PASS	AB=0.575;AC=8;AF=0.143;AN=56;BaseQRankSum=12.823;DP=635;FS=7.458;HRun=0;HaplotypeScore=114.5581;InbreedingCoeff=0.3568;MQ=86.97;MQ0=0;MQRankSum=-11.960;QD=10.37;ReadPosRankSum=0.562;VQSLOD=2.9238;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,2189	1/1:1,7:8:23.27:142,23,0	0/0:21,0:21:45.09:0,45,1003	0/0:26,0:26:68.78:0,69,1179	0/0:29,0:29:81.10:0,81,1609	0/0:21,0:21:63.20:0,63,1242	0/0:36,0:36:99:0,108,2142	0/1:2,12:14:68.75:198,0,69	0/0:29,0:29:87.30:0,87,1767	0/0:20,0:20:60.21:0,60,1219	0/0:10,0:10:30.07:0,30,525	0/0:38,0:38:99:0,114,2193	0/0:29,0:29:87.30:0,87,1734	0/0:24,0:24:69.21:0,69,1312	0/0:28,0:28:84.29:0,84,1685	0/0:26,0:26:78.27:0,78,1574	0/0:37,0:37:99:0,111,2174	0/0:22,0:22:63.19:0,63,1238	0/1:3,8:11:99:113,0,132	1/1:1,6:7:4.64:89,5,0	0/1:9,13:20:33.68:199,0,34	0/0:16,0:16:48.16:0,48,975	0/0:18,0:18:54.19:0,54,1084	0/0:44,0:44:99:0,132,2634	0/0:14,0:14:42.13:0,42,776	0/0:29,0:29:84.27:0,84,1621	0/1:3,12:15:28.28:198,0,28	0/0:4,0:4:12.04:0,12,244
chr10	105284754	.	ATGT	A	2208.18	PASS	AB=0.552;AC=9;AF=0.161;AN=56;BaseQRankSum=12.637;DP=634;FS=2.326;HRun=0;HaplotypeScore=121.3155;InbreedingCoeff=0.5923;MQ=87.05;MQ0=0;MQRankSum=-12.478;QD=30.67;ReadPosRankSum=1.127;VQSLOD=3.7749;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,3057	1/1:0,7:7:21.07:297,21,0	0/0:21,0:21:60.21:0,60,1387	0/0:26,0:26:69.11:0,69,1536	0/0:29,0:29:81.08:0,81,1892	0/0:21,0:21:63.22:0,63,1552	0/0:36,0:36:99:0,108,2581	0/1:2,12:14:12.75:483,0,13	0/0:29,0:29:84.29:0,84,2070	0/0:22,0:22:66.23:0,66,1613	0/0:8,0:8:24.08:0,24,584	0/0:36,0:36:99:0,108,2654	0/0:28,0:28:84.27:0,84,1982	0/0:23,0:23:66.23:0,66,1614	0/0:28,0:28:84.29:0,84,2044	0/0:26,0:26:78.27:0,78,1919	0/0:37,0:37:99:0,111,2688	0/0:22,0:22:66.14:0,66,1505	0/1:3,8:11:36.73:306,0,37	1/1:1,6:7:8.89:241,9,0	1/1:6,13:18:18.32:567,18,0	0/0:17,0:17:51.18:0,51,1250	0/0:19,0:19:51.16:0,51,1197	0/0:47,0:47:99:0,141,3420	0/0:13,0:13:39.13:0,39,958	0/0:28,0:28:81.26:0,81,1948	0/1:2,12:14:12:467,0,12	0/0:4,0:4:12.04:0,12,296
chr10	105284757	.	T	TCCCCA	4205.24	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.190;DP=650;FS=3.977;HRun=0;HaplotypeScore=156.1626;InbreedingCoeff=0.9889;MQ=86.57;MQ0=0;MQRankSum=-14.515;QD=42.91;ReadPosRankSum=-1.152;VQSLOD=3.4990;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,2858	1/1:7,0:7:20.12:106,20,0	0/0:23,0:23:63.22:0,63,1348	0/0:25,0:25:64.39:0,64,1366	0/0:26,0:26:72.70:0,73,1633	0/0:21,0:21:63.15:0,63,1327	0/0:33,0:33:99:0,99,2235	1/1:17,2:19:53.55:1069,54,0	0/0:29,0:29:84.27:0,84,1892	0/0:22,0:22:66.21:0,66,1489	0/0:8,0:8:24.08:0,24,555	0/0:38,0:38:99:0,111,2491	0/0:29,0:29:81.26:0,81,1791	0/0:25,0:25:69.14:0,69,1445	0/0:27,0:27:81.28:0,81,1887	0/0:27,0:27:81.26:0,81,1821	0/0:36,0:36:99:0,108,2439	0/0:19,0:19:57.15:0,57,1276	1/1:14,3:17:47.86:1293,48,0	1/1:8,1:9:14.84:144,15,0	1/1:21,6:26:52.58:928,53,0	0/0:17,0:17:51.15:0,51,1075	0/0:17,0:17:48.16:0,48,1074	0/0:45,0:45:99:0,135,3087	0/0:12,0:12:36.12:0,36,839	0/0:27,0:27:78.26:0,78,1760	1/1:15,2:18:49.20:665,49,0	0/0:4,0:4:12.04:0,12,280
chr10	105285703	.	T	TTTAA	9247.28	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.171;DP=670;FS=2.615;HRun=0;HaplotypeScore=105.7607;InbreedingCoeff=0.9990;MQ=80.75;MQ0=0;MQRankSum=-8.426;QD=65.58;ReadPosRankSum=-1.418;VQSLOD=6.6593;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,2266	1/1:2,13:16:39.13:966,39,0	0/0:34,0:34:63.49:0,63,1513	0/0:22,0:22:50.84:0,51,898	0/0:17,0:17:51.17:0,51,967	0/0:23,0:22:66.21:0,66,1209	0/0:23,0:23:63.22:0,63,1184	1/1:8,21:30:78.25:1973,78,0	0/0:24,0:24:72.25:0,72,1359	0/0:23,0:23:66.23:0,66,1253	0/0:10,0:10:30.08:0,30,507	0/0:26,0:26:75.21:0,75,1387	0/0:19,0:19:54.19:0,54,1025	0/0:28,0:28:84.25:0,84,1506	0/0:22,0:22:63.22:0,63,1168	0/0:28,0:28:81.28:0,81,1538	0/0:30,0:30:87.30:0,87,1612	0/0:36,0:36:99:0,102,1904	1/1:3,24:28:84.26:2014,84,0	1/1:1,14:16:45.15:1168,45,0	1/1:3,11:16:33.11:844,33,0	0/0:22,0:22:57.17:0,57,1029	0/0:16,0:16:48.14:0,48,847	0/0:29,0:29:87.30:0,87,1652	0/0:18,0:18:51.16:0,51,936	0/0:30,0:30:84.29:0,84,1590	1/1:2,32:34:90.31:2281,90,0	0/0:7,0:7:21.04:0,21,334
chr10	105287011	.	GAA	G	491	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.045;DP=717;FS=4.689;HRun=2;HaplotypeScore=97.6165;InbreedingCoeff=0.9958;MQ=86.93;MQ0=0;MQRankSum=-4.765;QD=25.84;ReadPosRankSum=0.262;VQSLOD=2.4930;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,2808	1/1:1,18:19:54.11:586,54,0	0/0:24,0:24:70.99:0,71,1145	0/0:26,0:26:75.25:0,75,1401	0/0:14,0:14:42.14:0,42,853	0/0:16,0:16:48.16:0,48,975	0/0:34,0:34:99:0,102,2005	0/0:33,0:33:99:0,99,1828	0/0:30,0:30:90.24:0,90,1703	0/0:29,0:29:84.26:0,84,1635	0/0:13,0:13:39.13:0,39,792	0/0:37,0:37:99:0,111,2142	0/0:21,0:21:63.22:0,63,1268	0/0:34,0:34:99:0,102,2051	0/0:20,0:20:57.19:0,57,1112	0/0:23,0:23:69.23:0,69,1341	0/0:33,0:33:99:0,99,1944	0/0:29,0:29:84.29:0,84,1655	0/0:21,0:21:63.17:0,63,1175	0/0:14,0:14:42.14:0,42,837	0/0:50,0:50:99:0,150,2931	0/0:20,0:20:54.16:0,54,1032	0/0:15,0:15:42.13:0,42,806	0/0:33,0:33:99:0,99,1900	0/0:21,0:21:60.19:0,60,1167	0/0:33,0:33:99:0,99,1934	0/0:20,0:20:54.18:0,54,1072	0/0:7,0:7:21.07:0,21,402
chr10	105287014	.	GA	G	272.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.101;DP=700;FS=4.679;HRun=3;HaplotypeScore=82.1975;InbreedingCoeff=0.9958;MQ=86.78;MQ0=0;MQRankSum=-3.897;QD=14.36;ReadPosRankSum=-0.021;VQSLOD=2.7853;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,1944	1/1:2,17:19:52.67:368,53,0	0/0:23,0:23:63.17:0,63,877	0/0:25,0:25:69.23:0,69,993	0/0:16,0:16:48.15:0,48,670	0/0:16,0:16:48.16:0,48,691	0/0:33,0:33:99:0,99,1408	0/0:32,0:32:96.31:0,96,1360	0/0:29,0:29:81.27:0,81,1166	0/0:28,0:28:81.26:0,81,1150	0/0:13,0:13:39.11:0,39,542	0/0:36,0:36:99:0,108,1533	0/0:22,0:22:66.22:0,66,946	0/0:36,0:36:99:0,108,1550	0/0:19,0:19:54.18:0,54,778	0/0:21,0:21:63.20:0,63,887	0/0:32,0:32:96.30:0,96,1361	0/0:30,0:30:87.23:0,87,1210	0/0:21,0:21:63.20:0,63,888	0/0:14,0:14:42.14:0,42,605	0/0:50,0:50:99:0,150,2137	0/0:16,0:16:45.12:0,45,611	0/0:13,0:13:39.13:0,39,561	0/0:31,0:31:90.29:0,90,1277	0/0:19,0:19:54.18:0,54,775	0/0:32,0:32:96.32:0,96,1381	0/0:21,0:21:54.18:0,54,775	0/0:7,0:7:21.07:0,21,300
chr10	105287077	.	TAG	T	5654.90	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.371;DP=616;FS=9.772;HRun=0;HaplotypeScore=75.7046;InbreedingCoeff=0.9957;MQ=80.51;MQ0=0;MQRankSum=-1.506;QD=40.39;ReadPosRankSum=-0.450;VQSLOD=6.0946;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,2318	1/1:0,13:13:33.11:505,33,0	0/0:14,0:14:41.97:0,42,733	0/0:16,0:16:45.15:0,45,804	0/0:10,0:10:30.10:0,30,580	0/0:18,0:18:54.17:0,54,1010	0/0:27,0:27:78.27:0,78,1507	1/1:2,24:26:66.21:986,66,0	0/0:31,0:31:93.32:0,93,1796	0/0:23,0:23:66.23:0,66,1275	0/0:9,0:9:24.07:0,24,431	0/0:34,0:34:99:0,99,1912	0/0:20,0:20:60.21:0,60,1151	0/0:41,0:41:99:0,123,2362	0/0:17,0:17:48.16:0,48,918	0/0:15,0:15:45.14:0,45,836	0/0:26,0:26:78.27:0,78,1507	0/0:41,0:41:99:0,123,2302	1/1:1,13:14:39.13:590,39,0	1/1:1,16:17:45.15:689,45,0	1/1:3,45:48:99:1975,129,0	0/0:11,0:11:33.11:0,33,624	0/0:8,0:8:24.08:0,24,464	0/0:32,0:32:93.32:0,93,1796	0/0:15,0:15:45.15:0,45,869	0/0:23,0:23:69.24:0,69,1327	1/1:1,21:22:60.20:910,60,0	0/0:5,0:5:15.05:0,15,290
chr10	105287848	.	GAAATGTC	G	4588.04	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.700;DP=684;FS=3.661;HRun=0;HaplotypeScore=162.0267;InbreedingCoeff=0.9900;MQ=75.91;MQ0=0;MQRankSum=-11.903;QD=37.30;ReadPosRankSum=0.359;VQSLOD=4.6066;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,148,5681	1/1:2,8:10:15.05:372,15,0	0/0:19,0:19:54.15:0,54,1911	0/0:15,0:15:39.10:0,39,1217	0/0:22,0:22:66.23:0,66,2505	0/0:23,0:23:60.21:0,60,2253	0/0:26,0:26:72.23:0,72,2635	1/1:4,10:14:30.10:743,30,0	0/0:24,0:24:69.24:0,69,2678	0/0:33,0:33:84.28:0,84,3095	0/0:13,0:13:39.13:0,39,1285	0/0:31,0:31:84.29:0,84,3232	0/0:24,0:24:63.21:0,63,2311	0/0:30,0:30:75.26:0,75,2876	0/0:32,0:32:93.32:0,93,3515	0/0:33,0:32:93.31:0,93,3348	0/0:32,0:32:84.29:0,84,3242	0/0:22,0:22:60.18:0,60,2224	1/1:7,13:20:39.10:856,39,0	1/1:3,14:17:27.09:616,27,0	1/1:12,18:30:11.98:327,12,0	0/0:18,0:18:45.15:0,45,1670	0/0:14,0:14:39.13:0,39,1497	0/0:35,0:35:96.33:0,96,3629	0/0:22,0:22:63.22:0,63,2245	0/0:29,0:29:78.26:0,78,2890	1/1:3,28:32:68.87:1674,69,0	0/0:14,0:14:42.14:0,42,1504
chr10	105289445	.	T	TAAG	3472.83	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.494;DP=734;FS=2.485;HRun=0;HaplotypeScore=98.7312;InbreedingCoeff=0.9993;MQ=91.15;MQ0=0;MQRankSum=-2.142;QD=48.23;ReadPosRankSum=1.908;VQSLOD=5.3616;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1663	0/0:10,0:10:30.10:0,30,482	0/0:31,0:31:81.21:0,81,1186	0/0:28,0:28:61.66:0,62,797	0/0:25,0:25:75.26:0,75,1217	1/1:0,15:15:42.14:938,42,0	1/1:3,32:37:75.26:1665,75,0	0/0:38,0:38:99:0,99,1611	0/0:27,0:27:78.27:0,78,1265	0/0:27,0:27:75.22:0,75,1157	0/0:25,0:25:66.22:0,66,1049	0/0:25,0:25:75.24:0,75,1197	0/0:23,0:23:66.23:0,66,1076	0/0:24,0:24:63.20:0,63,997	0/0:29,0:29:81.25:0,81,1272	0/0:28,0:28:78.27:0,78,1269	0/0:38,0:38:99:0,108,1753	0/0:17,0:17:51.17:0,51,831	0/0:17,0:17:45.15:0,45,727	0/0:26,0:26:72.25:0,72,1164	0/0:42,0:42:99:0,114,1862	0/0:23,0:23:69.21:0,69,1075	0/0:14,0:14:33.11:0,33,539	0/0:36,0:36:99:0,102,1630	1/1:1,19:20:39.13:870,39,0	0/0:38,0:38:99:0,108,1735	0/0:26,0:26:75.22:0,75,1172	0/0:10,0:10:27.09:0,27,441
chr10	105291852	.	G	GGGT	247.07	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=1.537;DP=303;FS=0.000;HRun=0;HaplotypeScore=53.7632;InbreedingCoeff=0.7339;MQ=76.07;MQ0=1;MQRankSum=-3.263;QD=11.23;ReadPosRankSum=-3.914;VQSLOD=1.9797;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:65.76:0,66,603	1/1:1,0:1:3:25,3,0	0/0:9,0:8:14.94:0,15,163	0/0:17,0:16:12.61:0,13,245	0/0:7,0:7:20.96:0,21,203	1/1:5,0:3:12:130,12,0	1/1:0,10:14:13.77:183,14,0	0/0:13,0:13:22.66:0,23,192	0/0:6,0:6:15.01:0,15,167	0/0:5,0:5:9:0,9,80	0/0:11,0:11:20.78:0,21,191	0/0:15,0:15:41.02:0,41,372	0/0:11,0:11:26.99:0,27,266	0/0:13,0:13:32.59:0,33,302	0/0:13,0:13:32.98:0,33,312	0/0:8,0:8:24.01:0,24,265	0/0:31,0:31:83.66:0,84,874	0/0:20,0:19:44.85:0,45,480	0/0:10,0:10:18.40:0,18,162	0/0:7,0:7:9.69:0,10,86	0/0:14,0:13:13.23:0,13,133	0/0:10,0:10:23.61:0,24,237	0/0:1,0:1:0.47:0,0,1	0/0:22,0:22:56.89:0,57,543	1/1:2,0:2:5.96:45,6,0	0/0:7,0:7:17.93:0,18,145	0/0:3,0:3:2.99:0,3,23	0/0:0,0:1:2.98:0,3,21
chr10	105292180	.	GCA	G	758.91	PASS	AB=0.911;AC=21;AF=0.404;AN=52;BaseQRankSum=5.448;DP=529;FS=0.000;HRun=0;HaplotypeScore=70.2011;InbreedingCoeff=-0.0423;MQ=59.95;MQ0=18;MQRankSum=0.637;QD=2.49;ReadPosRankSum=1.129;VQSLOD=1.5310;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:6.02:0,6,83	1/1:4,0:6:5.68:28,6,0	./.	0/0:49,0:21:0:0,0,0	0/0:18,0:18:21.05:0,21,272	0/1:12,2:14:20.20:20,0,110	0/1:24,1:25:20.50:21,0,117	./.	0/1:14,1:15:34.32:34,0,74	0/0:11,0:11:3.01:0,3,44	0/1:14,0:14:35.41:37,0,35	0/1:20,1:24:32.04:32,0,241	0/0:16,0:16:21.07:0,21,310	0/0:14,0:16:9.02:0,9,115	0/1:14,2:16:17.18:17,0,162	0/0:7,0:7:9.03:0,9,133	0/1:27,4:31:40.42:40,0,215	0/1:20,2:21:66.77:67,0,154	1/1:9,2:12:8.82:67,9,0	1/1:4,4:8:6.01:64,6,0	1/1:38,5:41:15.04:161,15,0	0/1:15,2:17:18.96:19,0,123	0/0:8,0:8:2.88:0,3,44	0/1:28,2:31:39.40:39,0,153	0/1:10,0:11:35.40:37,0,35	0/0:20,0:20:12.04:0,12,177	1/1:8,5:14:26.57:235,27,0	0/0:4,0:4:3.01:0,3,44
chr10	105292889	.	TCC	T	3141.02	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=11.334;DP=638;FS=4.227;HRun=2;HaplotypeScore=88.7922;InbreedingCoeff=0.8375;MQ=70.22;MQ0=0;MQRankSum=-2.247;QD=37.84;ReadPosRankSum=-0.985;VQSLOD=3.4483;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,2005	0/0:10,0:10:30.10:0,30,609	0/0:8,0:8:18.06:0,18,365	0/1:8,0:8:15.25:15,0,359	0/0:11,0:11:33.11:0,33,634	1/1:0,18:18:45.11:705,45,0	1/1:0,36:36:99:1681,108,0	0/0:30,0:30:90.30:0,90,1785	0/0:27,0:27:81.26:0,81,1598	0/0:22,0:22:66.19:0,66,1291	0/0:14,0:14:42.14:0,42,853	0/0:35,0:35:99:0,105,2055	0/0:34,0:34:99:0,102,2060	0/0:29,0:29:87.30:0,87,1766	0/0:32,0:32:96.33:0,96,1937	0/0:34,0:34:99:0,102,2060	0/0:35,0:35:99:0,102,2057	0/0:23,0:23:66.19:0,66,1277	0/0:13,0:13:39.13:0,39,740	0/0:10,0:10:27.09:0,27,536	0/0:43,0:43:99:0,126,2559	0/0:11,0:11:33.11:0,33,667	0/0:14,0:14:42.14:0,42,851	0/0:40,0:40:99:0,120,2426	1/1:0,21:21:57.15:889,57,0	0/0:19,0:18:57.20:0,57,1157	0/0:18,0:18:54.19:0,54,1084	0/0:8,0:8:24.08:0,24,487
chr10	105294289	.	GGCTCACAACCATCT	G	816.49	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=4.403;DP=620;FS=1.471;HRun=0;HaplotypeScore=214.8285;InbreedingCoeff=0.8431;MQ=52.90;MQ0=35;MQRankSum=-4.322;QD=102.06;ReadPosRankSum=1.391;VQSLOD=3.7304;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:60.68:0,61,3981	1/1:1,7:8:21.07:908,21,0	./.	0/0:28,0:1:3.01:0,3,201	0/0:26,0:23:60.21:0,60,3969	0/0:29,0:29:75.25:0,75,4736	0/0:23,0:21:42.13:0,42,2722	0/0:31,0:30:84.29:0,84,5051	0/0:15,0:15:42.12:0,42,2718	0/0:24,0:22:66.18:0,66,3856	0/0:12,0:11:30.10:0,30,2139	0/0:17,0:17:48.16:0,48,3168	0/0:18,0:16:45.15:0,45,2602	0/0:22,0:22:63.22:0,63,4470	0/0:22,0:22:57.20:0,57,3825	0/0:32,0:32:87.30:0,87,5668	0/0:24,0:24:69.21:0,69,4352	0/0:32,0:30:73.52:0,74,4572	0/0:12,0:12:36.12:0,36,2364	0/0:25,0:25:72.23:0,72,4385	0/0:60,0:57:99:0,144,9574	0/0:10,0:10:24.08:0,24,1575	0/0:15,0:15:36.12:0,36,2567	0/0:23,0:23:66.23:0,66,4266	0/0:23,0:23:60.20:0,60,3928	0/0:20,0:20:57.20:0,57,3542	0/0:20,0:20:57.03:0,57,3598	0/0:8,0:8:24.08:0,24,1711
chr10	105294387	.	A	AT	2289.13	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=-5.027;DP=533;FS=16.576;HRun=2;HaplotypeScore=60.4536;InbreedingCoeff=0.6922;MQ=66.06;MQ0=2;MQRankSum=-0.779;QD=12.44;ReadPosRankSum=0.532;VQSLOD=0.8760;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:76.67:0,77,861	1/1:0,4:4:9.03:129,9,0	0/0:18,0:14:34.39:0,34,310	0/0:10,0:8:14.12:0,14,163	0/0:29,0:29:81.23:0,81,965	1/1:4,28:32:49.42:951,49,0	1/1:1,14:15:33.04:444,33,0	0/1:32,0:32:8.79:19,0,9	0/0:12,0:12:33.04:0,33,366	0/0:27,0:27:78.13:0,78,881	0/0:24,0:24:72.22:0,72,880	0/0:17,0:17:51.04:0,51,570	0/0:14,0:14:42.08:0,42,478	0/0:18,0:18:50.98:0,51,563	0/0:19,0:19:48.15:0,48,584	0/0:16,0:16:39.10:0,39,459	0/0:20,0:20:60.14:0,60,699	0/0:13,0:13:33.05:0,33,364	1/1:28,0:28:21.56:128,22,0	0/1:20,0:20:1:41,0,1	0/1:11,0:11:6.37:18,0,6	0/0:7,0:7:18.03:0,18,191	0/0:19,0:19:51.11:0,51,583	0/0:12,0:12:30.07:0,30,356	1/1:1,20:21:51.17:730,51,0	0/0:27,0:26:78.17:0,78,904	0/1:21,0:21:10.41:10,0,22	0/0:17,0:17:50.92:0,51,580
chr10	105295630	.	G	GC	96.56	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.531;DP=466;FS=1.926;HRun=4;HaplotypeScore=51.3577;InbreedingCoeff=0.7504;MQ=79.81;MQ0=0;MQRankSum=-1.747;QD=13.79;ReadPosRankSum=-0.244;VQSLOD=1.8708;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:78.18:0,78,861	1/1:2,5:7:15.02:185,15,0	0/0:14,0:14:38.73:0,39,391	0/0:15,0:15:31.94:0,32,315	0/0:11,0:11:30.08:0,30,333	0/0:16,0:16:48.12:0,48,534	0/0:22,0:22:57.13:0,57,626	0/0:21,0:21:45.09:0,45,478	0/0:24,0:24:63.16:0,63,705	0/0:25,0:25:66.18:0,66,741	0/0:6,0:6:18.05:0,18,204	0/0:27,0:27:75.18:0,75,830	0/0:15,0:15:39.11:0,39,442	0/0:24,0:24:60.12:0,60,647	0/0:12,0:12:33.09:0,33,374	0/0:18,0:18:42.09:0,42,459	0/0:26,0:26:69.19:0,69,782	0/0:24,0:24:72.21:0,72,816	0/0:20,0:20:54.11:0,54,589	0/0:3,0:3:9.01:0,9,92	0/0:32,0:32:87.15:0,87,941	0/0:8,0:8:18.04:0,18,195	0/0:5,0:5:15.04:0,15,170	0/0:21,0:21:60.10:0,60,648	0/0:3,0:3:6.02:0,6,68	0/0:14,0:14:39.10:0,39,433	0/0:15,0:15:39.09:0,39,432	0/0:4,0:4:6.02:0,6,68
chr10	105295809	.	CACCT	C	2409.30	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.612;DP=631;FS=8.156;HRun=0;HaplotypeScore=105.4571;InbreedingCoeff=0.9893;MQ=87.97;MQ0=0;MQRankSum=-3.384;QD=41.54;ReadPosRankSum=1.612;VQSLOD=3.9179;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.20:0,93,2329	0/0:11,0:11:30.09:0,30,784	0/0:22,0:22:63.18:0,63,1558	0/0:23,0:23:66.18:0,66,1568	0/0:9,0:9:27.05:0,27,650	1/1:0,17:17:42.14:874,42,0	1/1:0,32:32:69.02:1333,69,0	0/0:25,0:25:63.17:0,63,1448	0/0:22,0:22:66.21:0,66,1812	0/0:21,0:21:63.21:0,63,1715	0/0:5,0:5:15.05:0,15,417	0/0:25,0:25:75.24:0,75,2090	0/0:18,0:18:51.13:0,51,1276	0/0:31,0:31:93.26:0,93,2412	0/0:19,0:19:57.14:0,57,1377	0/0:28,0:28:84.19:0,84,1996	0/0:41,0:41:99:0,123,3351	0/0:51,0:51:99:0,153,4128	0/0:14,0:14:36.11:0,36,980	0/0:19,0:19:54.06:0,54,1124	0/0:53,0:53:99:0,153,3921	0/0:22,0:22:60.07:0,60,1392	0/0:7,0:7:21.07:0,21,549	0/0:31,0:31:93.27:0,93,2439	1/1:0,9:9:18.06:345,18,0	0/0:21,0:21:63.21:0,63,1727	0/0:13,0:13:39.10:0,39,908	0/0:10,0:10:30.08:0,30,803
chr10	105296207	.	GACACTCAGTGTTGCA	G	7804.98	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.121;DP=712;FS=5.496;HRun=0;HaplotypeScore=287.9526;InbreedingCoeff=0.9634;MQ=69.43;MQ0=0;MQRankSum=-8.501;QD=75.05;ReadPosRankSum=-3.153;VQSLOD=3.3870;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,157,10432	0/0:8,0:8:24.08:0,24,1547	0/0:10,0:10:4.71:0,5,181	0/0:9,0:9:16.86:0,17,491	0/0:19,0:19:54.18:0,54,3285	0/0:21,0:21:57.18:0,57,3427	0/0:29,0:29:78.25:0,78,5352	1/1:1,26:27:78.24:1761,78,0	0/0:36,0:36:99:0,105,7218	0/0:36,0:36:93.32:0,93,6062	0/0:15,0:15:42.13:0,42,2910	0/0:32,0:32:84.26:0,84,5612	0/0:26,0:26:75.26:0,75,4825	0/0:24,0:24:72.25:0,72,4691	0/0:32,0:31:96.32:0,96,6144	0/0:31,0:31:87.30:0,87,6306	0/0:42,0:42:99:0,117,8254	0/0:30,0:30:84.29:0,84,5745	1/1:1,11:12:33.07:729,33,0	1/1:1,16:17:39.13:1650,39,0	1/1:4,21:25:33.11:1421,33,0	0/0:29,0:29:81.26:0,81,5106	0/0:19,0:19:54.19:0,54,3534	0/0:44,0:44:99:0,126,8534	0/0:22,0:21:63.22:0,63,4502	0/0:33,0:33:96.33:0,96,6184	1/1:2,21:23:51.65:2245,52,0	0/0:8,0:8:15.05:0,15,1111
chr10	105297971	.	T	TG	6778.73	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-15.473;DP=732;FS=4.945;HRun=2;HaplotypeScore=71.7756;InbreedingCoeff=0.9987;MQ=76.89;MQ0=0;MQRankSum=-2.354;QD=40.35;ReadPosRankSum=-2.479;VQSLOD=4.1789;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,1778	1/1:0,10:10:27.09:389,27,0	0/0:11,0:11:30.09:0,30,364	0/0:21,0:21:26.85:0,27,536	0/0:18,0:18:45.14:0,45,558	0/0:17,0:16:42.13:0,42,521	0/0:24,0:24:66.21:0,66,818	1/1:2,36:38:99:1528,108,0	0/0:30,0:30:90.28:0,90,1114	0/0:25,0:25:75.24:0,75,929	0/0:9,0:9:24.06:0,24,286	0/0:48,0:48:99:0,135,1635	0/0:45,0:45:99:0,129,1596	0/0:31,0:31:93.24:0,93,1117	0/0:25,0:25:72.21:0,72,880	0/0:25,0:25:69.20:0,69,843	0/0:26,0:26:74.44:0,74,913	0/0:19,0:19:51.16:0,51,631	1/1:1,25:26:78.26:1109,78,0	1/1:0,18:18:54.18:777,54,0	1/1:1,51:53:99:2025,141,0	0/0:9,0:9:27.08:0,27,331	0/0:14,0:14:42.11:0,42,499	0/0:48,0:48:99:0,141,1716	0/0:18,0:18:51.14:0,51,618	0/0:41,0:41:99:0,117,1440	1/1:0,23:23:66.22:950,66,0	0/0:10,0:10:30.09:0,30,372
chr10	105298337	.	ACACACACACACC	A	1549.84	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=-1.882;DP=538;FS=0.470;HRun=0;HaplotypeScore=162.7552;InbreedingCoeff=0.6149;MQ=53.57;MQ0=23;MQRankSum=3.860;QD=9.81;ReadPosRankSum=-1.847;VQSLOD=2.4929;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:46.09:0,46,1205	1/1:12,0:10:4.23:31,4,0	0/0:16,0:4:8.97:0,9,78	0/0:15,0:11:15.72:0,16,178	0/0:10,0:9:21.04:0,21,589	0/1:16,0:16:10.88:94,0,11	0/1:29,0:29:60.71:305,0,61	1/1:20,0:17:35.41:316,35,0	0/0:17,0:17:33.82:0,34,739	0/0:24,0:23:64.48:0,64,1142	0/0:5,0:4:12.01:0,12,266	0/0:22,0:22:55.08:0,55,1691	0/0:21,0:21:50.82:0,51,1213	0/0:21,0:21:54.35:0,54,1637	0/0:19,0:19:47.97:0,48,1393	0/0:13,0:12:33.52:0,34,908	0/0:47,0:45:99:0,115,2367	0/0:31,0:30:78.17:0,78,2162	1/1:15,0:12:26.78:209,27,0	1/1:3,4:6:2.96:19,3,0	1/1:44,0:42:75.22:635,75,0	0/0:9,0:9:23.25:0,23,478	0/0:3,0:3:6.47:0,6,54	0/0:36,0:33:79.05:0,79,2614	0/0:17,0:17:3:0,3,25	0/0:23,0:23:64.68:0,65,1569	1/1:1,14:15:0.73:111,1,0	0/0:2,0:2:3.01:0,3,187
chr10	105298339	.	ACACACACACC	A	1690.71	PASS	AB=1.000;AC=14;AF=0.259;AN=54;BaseQRankSum=-2.613;DP=536;FS=0.000;HRun=0;HaplotypeScore=146.4980;InbreedingCoeff=0.7565;MQ=55.11;MQ0=22;MQRankSum=1.693;QD=11.12;ReadPosRankSum=-1.637;VQSLOD=2.2947;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:51.92:0,52,1058	1/1:13,0:11:11.45:99,11,0	0/0:16,0:4:8.97:0,9,78	0/0:16,0:12:11.89:0,12,172	0/0:10,0:9:21.02:0,21,489	1/1:16,0:16:22.09:208,22,0	0/1:25,0:25:36.41:290,0,36	1/1:20,0:18:43.02:373,43,0	0/0:18,0:18:33.18:0,33,600	0/0:24,0:23:61.47:0,61,902	0/0:4,0:3:9.02:0,9,176	0/0:20,0:20:52.08:0,52,1301	0/0:22,0:22:53.82:0,54,1033	0/0:21,0:21:54.35:0,54,1363	0/0:20,0:20:50.97:0,51,1179	0/0:13,0:12:33.52:0,34,749	0/0:47,0:45:99:0,113,1867	0/0:32,0:31:78.13:0,78,1685	1/1:15,0:12:32.79:261,33,0	0/1:5,0:4:0:0,0,0	1/1:43,0:41:70.33:555,70,0	0/0:9,0:9:23.25:0,23,399	0/0:3,0:3:6.47:0,6,54	0/0:37,0:34:82.02:0,82,2105	./.	0/0:22,0:22:61.66:0,62,1273	1/1:15,0:15:0.86:78,1,0	0/0:3,0:3:6.01:0,6,187
chr10	105298343	.	ACACACC	A	1729.38	PASS	AC=14;AF=0.269;AN=52;BaseQRankSum=-2.378;DP=532;FS=2.021;HRun=0;HaplotypeScore=112.6473;InbreedingCoeff=0.8859;MQ=59.81;MQ0=20;MQRankSum=2.947;QD=12.44;ReadPosRankSum=-0.677;VQSLOD=2.4904;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:58:0,58,794	1/1:4,8:10:11.62:112,12,0	0/0:16,0:4:8.97:0,9,78	0/0:20,0:16:6.14:0,6,182	0/0:9,0:8:17.98:0,18,307	1/1:12,0:12:17.42:139,17,0	1/1:25,0:25:18.12:327,18,0	1/1:21,0:19:47.33:403,47,0	0/0:15,0:15:36.16:0,36,392	0/0:23,0:22:60.73:0,61,582	0/0:4,0:4:9.01:0,9,103	0/0:20,0:20:47.72:0,48,626	0/0:22,0:22:53.72:0,54,579	0/0:21,0:21:54.31:0,54,820	0/0:21,0:21:56.43:0,56,815	0/0:13,0:12:33.04:0,33,426	0/0:46,0:44:99:0,106,1192	0/0:34,0:33:60.66:0,61,961	1/1:14,0:11:32.79:261,33,0	./.	1/1:40,0:39:76.46:617,76,0	0/0:10,0:10:26.22:0,26,243	0/0:5,0:5:12.47:0,12,105	0/0:38,0:35:81.25:0,81,1177	./.	0/0:22,0:22:62.23:0,62,841	1/1:15,0:15:1.97:52,2,0	0/0:3,0:3:6.01:0,6,135
chr10	105298347	.	ACC	A	1896.63	PASS	AC=14;AF=0.269;AN=52;BaseQRankSum=-1.833;DP=535;FS=0.885;HRun=5;HaplotypeScore=80.2174;InbreedingCoeff=0.8629;MQ=65.03;MQ0=14;MQRankSum=1.755;QD=13.17;ReadPosRankSum=-0.705;VQSLOD=-0.4419;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:55.11:0,55,545	1/1:12,0:10:11.70:84,12,0	0/0:18,0:6:14.98:0,15,133	0/0:23,0:19:0.09:0,0,187	0/0:10,0:9:15.01:0,15,159	1/1:11,0:11:19.37:160,19,0	1/1:28,0:28:58.06:430,58,0	1/1:21,0:20:49.08:407,49,0	0/0:16,0:16:35.59:0,36,294	0/0:23,0:22:47.86:0,48,420	0/0:3,0:3:6:0,6,54	0/0:19,0:19:28.51:0,29,357	0/0:20,0:20:40.46:0,40,397	0/0:20,0:20:42.26:0,42,368	0/0:21,0:21:53.70:0,54,494	0/0:14,0:13:30.46:0,30,261	0/0:43,0:43:99:0,100,849	0/0:30,0:29:54.21:0,54,546	1/1:3,11:11:32.79:261,33,0	./.	1/1:43,0:43:89.51:712,90,0	0/0:10,0:10:20.22:0,20,166	0/0:7,0:7:18:0,18,158	0/0:37,0:35:74.73:0,75,627	./.	0/0:24,0:24:57.06:0,57,564	1/1:15,0:15:2.20:25,2,0	0/0:3,0:3:6.01:0,6,80
chr10	105298587	.	TTGGG	T	403.81	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.929;DP=416;FS=7.497;HRun=0;HaplotypeScore=70.1964;InbreedingCoeff=0.9677;MQ=65.57;MQ0=0;MQRankSum=-0.918;QD=40.38;ReadPosRankSum=3.861;VQSLOD=3.0914;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:56.92:0,57,753	1/1:1,9:10:27.01:498,27,0	0/0:20,0:12:32.37:0,32,366	0/0:21,0:14:31.54:0,32,472	0/0:8,0:8:20.29:0,20,197	0/0:13,0:13:32.97:0,33,459	0/0:20,0:20:57.04:0,57,776	0/0:18,0:18:51.09:0,51,657	0/0:10,0:10:30:0,30,266	0/0:13,0:13:35.90:0,36,432	0/0:11,0:11:26.95:0,27,348	0/0:19,0:19:48.01:0,48,489	0/0:12,0:12:26.84:0,27,268	0/0:8,0:8:19.83:0,20,312	0/0:20,0:19:48.49:0,48,536	0/0:22,0:22:49.71:0,50,554	0/0:28,0:28:63.51:0,64,813	0/0:18,0:18:41.49:0,41,518	0/0:11,0:11:27.04:0,27,485	0/0:8,0:8:20.85:0,21,194	0/0:19,0:19:48.52:0,49,583	0/0:8,0:8:17.96:0,18,151	0/0:9,0:9:23.94:0,24,201	0/0:15,0:15:36.02:0,36,458	0/0:11,0:11:29.98:0,30,367	0/0:16,0:16:45.04:0,45,506	0/0:16,0:16:39.01:0,39,457	0/0:8,0:8:24.04:0,24,402
chr10	105299372	.	C	CT	723.77	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-4.954;DP=550;FS=5.304;HRun=12;HaplotypeScore=55.7511;InbreedingCoeff=0.7906;MQ=67.18;MQ0=2;MQRankSum=0.376;QD=13.66;ReadPosRankSum=-0.218;VQSLOD=3.6667;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:65.49:0,65,476	0/0:8,0:8:20.84:0,21,148	0/0:22,0:11:0.01:0,0,86	0/0:19,0:10:11.07:0,11,67	0/0:22,0:23:58.66:0,59,419	1/1:2,18:22:19.83:327,20,0	1/1:1,11:12:27.04:262,27,0	0/0:31,0:31:62.50:0,63,453	0/0:25,0:25:59.48:0,59,429	0/0:22,0:22:40.92:0,41,289	0/0:18,0:18:32.61:0,33,231	0/0:21,0:22:38.59:0,39,275	0/0:13,0:15:39.84:0,40,272	0/0:11,0:11:23.80:0,24,173	0/0:14,0:14:32.68:0,33,229	0/0:19,0:19:47.63:0,48,341	0/0:29,0:29:38.73:0,39,430	0/0:20,1:21:24.43:0,24,340	0/0:28,0:28:59.60:0,60,433	0/0:12,1:13:0.11:0,0,145	0/0:8,0:8:17.88:0,18,131	0/0:18,0:18:18.17:0,18,256	0/0:17,0:17:38.56:0,39,271	0/0:16,0:17:37.83:0,38,268	1/1:5,14:19:11.14:270,11,0	0/0:29,0:29:59.47:0,59,432	0/0:19,0:19:50.71:0,51,372	0/0:17,0:17:9.26:0,9,227
chr10	105301304	.	A	AC	2298.08	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-2.190;DP=546;FS=5.556;HRun=5;HaplotypeScore=62.7519;InbreedingCoeff=0.9622;MQ=73.62;MQ0=0;MQRankSum=-2.391;QD=30.24;ReadPosRankSum=-1.862;VQSLOD=3.4511;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:96.23:0,96,1024	0/0:13,0:13:30.07:0,30,322	0/0:17,0:17:46.88:0,47,464	0/0:24,0:24:51.36:0,51,553	0/0:15,0:15:35.98:0,36,367	1/1:1,18:19:54.17:705,54,0	1/1:5,39:44:99:1301,99,0	0/0:32,0:32:63.14:0,63,670	0/0:20,0:20:57.12:0,57,603	0/0:13,0:13:36.09:0,36,386	0/0:6,0:6:15.04:0,15,161	0/0:24,0:24:69.15:0,69,732	0/0:14,0:14:42.08:0,42,440	0/0:21,0:21:60.10:0,60,624	0/0:26,0:26:69.17:0,69,741	0/0:17,0:17:42.07:0,42,440	0/0:22,0:22:60.12:0,60,632	0/0:22,0:22:60.10:0,60,623	0/0:18,0:17:51.13:0,51,546	0/0:11,0:11:27.07:0,27,288	0/0:30,0:30:81.19:0,81,862	0/0:10,0:10:24.05:0,24,252	0/0:8,0:8:12.03:0,12,129	0/0:28,0:28:81.20:0,81,870	1/1:1,12:13:33.11:434,33,0	0/0:20,0:20:54.13:0,54,578	0/0:19,0:19:51.11:0,51,539	0/0:3,0:3:9.02:0,9,97
chr10	105303095	.	TG	T	227.32	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.166;DP=457;FS=19.711;HRun=6;HaplotypeScore=49.1495;InbreedingCoeff=0.9550;MQ=80.02;MQ0=0;MQRankSum=-0.230;QD=20.67;ReadPosRankSum=0.850;VQSLOD=1.9507;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:93.25:0,93,1155	1/1:2,9:11:30.08:322,30,0	0/0:18,0:18:38.64:0,39,493	0/0:9,0:8:15.05:0,15,193	0/0:9,0:9:27.07:0,27,340	0/0:17,0:17:33.06:0,33,409	0/0:29,0:29:78.03:0,78,947	0/0:22,0:22:51.16:0,51,657	0/0:14,0:14:42.14:0,42,551	0/0:12,0:12:36.11:0,36,465	0/0:11,0:11:27.07:0,27,338	0/0:15,0:15:34.05:0,34,435	0/0:8,0:8:24.08:0,24,313	0/0:17,0:17:48.14:0,48,611	0/0:11,0:11:33.09:0,33,414	0/0:22,0:22:57.16:0,57,713	0/0:30,0:30:84.26:0,84,1088	0/0:22,0:22:60.20:0,60,788	0/0:9,0:9:15.05:0,15,195	0/0:6,0:6:18.06:0,18,236	0/0:26,0:26:53.68:0,54,707	0/0:20,0:20:57.19:0,57,750	0/0:10,0:10:27.09:0,27,353	0/0:17,0:17:42.09:0,42,528	0/0:13,0:13:36.11:0,36,459	0/0:16,0:16:39.13:0,39,512	0/0:12,0:11:33.10:0,33,416	0/0:13,0:13:30.10:0,30,394
chr10	105304693	.	GCAGACAGA	G	1750.47	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.281;DP=800;FS=3.854;HRun=0;HaplotypeScore=218.8750;InbreedingCoeff=0.9918;MQ=64.67;MQ0=0;MQRankSum=-7.998;QD=22.44;ReadPosRankSum=0.819;VQSLOD=3.2029;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:90.31:0,90,3630	0/0:18,0:18:33.11:0,33,716	0/0:27,0:20:24.08:0,24,627	0/0:26,0:22:24.14:0,24,674	0/0:27,0:27:48.15:0,48,1824	1/1:4,10:14:15.05:383,15,0	1/1:12,27:39:36.12:916,36,0	0/0:35,0:34:57.19:0,57,1772	0/0:25,0:25:57.20:0,57,2007	0/0:21,0:21:54.19:0,54,2108	0/0:19,0:19:36.12:0,36,1473	0/0:30,0:30:72.25:0,72,2941	0/0:31,0:31:72.25:0,72,2832	0/0:33,0:34:84.27:0,84,3260	0/0:32,0:32:78.25:0,78,2935	0/0:19,0:19:39.13:0,39,1558	0/0:37,0:37:80.49:0,80,3096	0/0:29,0:30:69.21:0,69,2482	0/0:20,0:20:40.02:0,40,1324	0/0:20,0:20:39.13:0,39,1417	0/0:67,0:67:99:0,126,4767	0/0:26,0:26:45.15:0,45,1833	0/0:23,0:24:42.11:0,42,1445	0/0:31,0:31:72.25:0,72,2854	1/1:8,16:25:24.08:592,24,0	0/0:37,0:37:63.21:0,63,2364	0/0:28,0:27:66.23:0,66,2604	0/0:16,0:16:33.11:0,33,1365
chr10	105309281	.	TAAA	T	1184.61	PASS	AB=0.865;AC=12;AF=0.214;AN=56;BaseQRankSum=0.192;DP=494;FS=11.279;HRun=16;HaplotypeScore=90.6356;InbreedingCoeff=0.7696;MQ=50.13;MQ0=19;MQRankSum=-1.640;QD=9.40;ReadPosRankSum=-0.739;VQSLOD=-0.6872;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:32:76.82:0,77,834	0/0:5,0:6:4.63:0,5,43	0/0:39,0:8:20.37:0,20,218	0/1:22,0:4:5.29:5,0,10	0/0:20,0:20:32.76:0,33,350	0/1:12,1:17:8.19:51,0,8	0/0:3,0:7:9.15:0,9,23	1/1:14,18:34:44.81:447,45,0	0/0:11,0:11:24.07:0,24,377	0/0:17,0:21:44.34:0,44,613	0/0:15,0:16:20.77:0,21,318	0/0:14,0:16:29.98:0,30,340	0/0:11,0:11:27.02:0,27,287	0/0:9,0:9:24.01:0,24,302	0/0:10,0:10:27.08:0,27,407	0/0:13,0:13:32.55:0,33,436	0/0:29,0:31:71.98:0,72,972	0/0:30,0:31:56.92:0,57,865	1/1:8,4:12:21.09:175,21,0	1/1:6,4:12:19.46:206,19,0	1/1:5,2:6:8.98:95,9,0	0/0:8,0:9:10.82:0,11,90	0/0:9,0:8:16.86:0,17,233	0/0:5,0:6:17.86:0,18,224	0/0:13,0:28:33.05:0,33,116	0/0:23,0:23:56.86:0,57,647	1/1:13,5:19:44.39:382,44,0	0/0:17,0:18:45.56:0,46,630
chr10	105309323	.	A	AAC	2416.72	PASS	AB=0.964;AC=16;AF=0.286;AN=56;BaseQRankSum=6.393;DP=472;FS=5.134;HRun=0;HaplotypeScore=102.5530;InbreedingCoeff=0.7950;MQ=61.11;MQ0=6;MQRankSum=-1.696;QD=14.47;ReadPosRankSum=-3.445;VQSLOD=2.7403;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:54.12:0,54,623	1/1:6,0:6:6.01:61,6,0	0/0:28,0:14:14.02:0,14,89	0/0:27,0:16:14.78:0,15,165	0/0:23,0:23:66.11:0,66,739	1/1:22,0:22:26.44:218,26,0	1/1:18,0:19:20.19:160,20,0	1/1:24,5:28:15.64:661,16,0	0/0:6,0:6:15.05:0,15,177	0/0:21,0:21:60.18:0,60,703	0/0:14,0:14:36.06:0,36,410	0/0:7,0:7:18.03:0,18,194	0/0:14,0:14:42.12:0,42,489	0/0:13,0:13:30.09:0,30,355	0/0:6,0:6:18.01:0,18,198	0/0:11,0:11:33.07:0,33,377	0/0:23,0:23:48.11:0,48,553	0/0:16,0:17:35.94:0,36,405	0/1:17,0:16:18.55:174,0,19	0/1:12,1:13:2.33:319,0,2	1/1:19,0:19:34.23:492,34,0	0/0:4,0:5:14.88:0,15,156	0/0:12,0:12:30.05:0,30,340	0/0:11,0:11:30.09:0,30,355	1/1:22,0:25:23.69:163,24,0	0/0:22,0:23:56.98:0,57,640	1/1:16,1:16:3.46:359,3,0	0/0:17,0:17:24.07:0,24,284
chr10	105309350	.	ACG	A	3169.29	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=7.547;DP=476;FS=8.820;HRun=0;HaplotypeScore=91.0259;InbreedingCoeff=0.9258;MQ=63.46;MQ0=5;MQRankSum=-0.998;QD=16.68;ReadPosRankSum=-2.636;VQSLOD=2.5888;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.04:0,54,800	1/1:8,0:8:8.83:64,9,0	0/0:14,0:9:7.25:0,7,35	0/1:13,0:5:2.04:24,0,2	0/0:25,0:25:66.02:0,66,1049	1/1:11,12:23:41.72:462,42,0	1/1:11,10:21:21.20:207,21,0	1/1:20,8:27:33.09:418,33,0	0/0:7,0:7:21.07:0,21,361	0/0:22,0:22:54.18:0,54,908	0/0:12,0:12:27.09:0,27,470	0/0:10,0:10:27.04:0,27,395	0/0:17,0:17:39.12:0,39,640	0/0:14,0:14:39.13:0,39,681	0/0:8,0:8:18.06:0,18,313	0/0:14,0:14:39.13:0,39,674	0/0:28,0:28:69.18:0,69,1155	0/0:20,0:20:57.19:0,57,930	1/1:11,8:18:45:540,45,0	1/1:14,4:18:42.08:477,42,0	1/1:21,3:24:47.75:628,48,0	0/0:10,0:10:29.97:0,30,472	0/0:12,0:12:30.10:0,30,503	0/0:13,0:13:36.12:0,36,629	1/1:14,8:22:17.86:195,18,0	0/0:22,0:22:62.99:0,63,1008	1/1:11,3:14:38.76:368,39,0	0/0:16,0:16:44.83:0,45,655
chr10	105311191	.	GC	G	567.72	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.129;DP=672;FS=0.934;HRun=2;HaplotypeScore=66.1686;InbreedingCoeff=0.9956;MQ=73.63;MQ0=0;MQRankSum=-0.902;QD=29.88;ReadPosRankSum=3.042;VQSLOD=3.3375;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,2000	1/1:0,19:19:51.17:663,51,0	0/0:9,0:8:21.07:0,21,312	0/0:16,0:16:44.71:0,45,589	0/0:25,0:25:75.23:0,75,1099	0/0:14,0:14:39.13:0,39,584	0/0:21,0:21:60.20:0,60,899	0/0:22,0:22:66.22:0,66,970	0/0:21,0:21:63.16:0,63,865	0/0:18,0:18:54.18:0,54,809	0/0:16,0:16:48.16:0,48,716	0/0:23,0:23:69.23:0,69,1034	0/0:22,0:22:63.20:0,63,923	0/0:25,0:25:75.23:0,75,1084	0/0:34,0:34:99:0,102,1526	0/0:30,0:30:87.27:0,87,1266	0/0:26,0:26:78.26:0,78,1168	0/0:22,0:22:66.22:0,66,987	0/0:19,0:19:57.19:0,57,831	0/0:20,0:20:60.20:0,60,899	0/0:51,0:51:99:0,151,2248	0/0:24,0:24:69.23:0,69,1034	0/0:15,0:15:45.15:0,45,674	0/0:34,0:34:99:0,99,1483	0/0:27,0:27:78.24:0,78,1129	0/0:26,0:26:78.26:0,78,1168	0/0:36,0:36:99:0,108,1575	0/0:11,0:11:33.11:0,33,495
chr10	105311889	.	C	CA	164.99	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.167;DP=610;FS=6.415;HRun=0;HaplotypeScore=73.3349;InbreedingCoeff=0.9833;MQ=80.38;MQ0=1;MQRankSum=-2.153;QD=23.57;ReadPosRankSum=0.056;VQSLOD=4.2616;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,147,1926	1/1:0,7:7:18.06:256,18,0	0/0:19,0:18:53.90:0,54,633	0/0:23,0:22:54.36:0,54,687	0/0:18,0:18:46.37:0,46,589	0/0:20,0:19:60.11:0,60,762	0/0:23,0:23:69.22:0,69,940	0/0:18,0:18:51.14:0,51,639	0/0:24,0:24:72.23:0,72,987	0/0:24,0:24:63.10:0,63,778	0/0:11,0:11:30.10:0,30,409	0/0:28,0:28:84.25:0,84,1123	0/0:20,0:20:60.13:0,60,778	0/0:24,0:24:69.21:0,69,944	0/0:21,0:21:63.18:0,63,831	0/0:24,0:24:72.23:0,72,988	0/0:41,0:41:99:0,120,1614	0/0:31,0:31:93.22:0,93,1237	0/0:23,0:23:66.17:0,66,825	0/0:13,0:13:39.09:0,39,513	0/0:33,0:33:96.25:0,96,1226	0/0:17,0:17:42.96:0,43,527	0/0:7,0:7:18.06:0,18,245	0/0:20,0:20:60.18:0,60,803	0/0:14,0:14:42.08:0,42,544	0/0:23,0:23:68.96:0,69,910	0/0:20,0:20:60.20:0,60,833	0/0:13,0:13:36.12:0,36,498
chr10	105312266	.	C	CG	6086.72	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-1.642;DP=546;FS=9.600;HRun=2;HaplotypeScore=220.5488;InbreedingCoeff=0.9885;MQ=63.50;MQ0=0;MQRankSum=-2.463;QD=33.26;ReadPosRankSum=-1.926;VQSLOD=2.1818;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,105,1272	1/1:2,6:8:15.49:229,15,0	0/0:12,0:9:36.10:0,36,432	0/0:8,0:8:23.99:0,24,262	0/0:20,0:20:44.06:0,44,541	1/1:3,23:26:75.24:1054,75,0	1/1:2,24:26:57.22:906,57,0	1/1:8,19:27:69.18:934,69,0	0/0:27,0:27:68.65:0,69,821	0/0:22,0:22:46.69:0,47,549	0/0:13,0:13:30.09:0,30,367	0/0:25,0:25:71.99:0,72,833	0/0:15,0:15:41.87:0,42,491	0/0:27,0:27:64.08:0,64,822	0/0:19,0:19:48.15:0,48,592	0/0:22,0:22:50.58:0,51,635	0/0:21,0:21:56.83:0,57,641	0/0:25,0:25:62.61:0,63,663	1/1:6,13:19:42.13:580,42,0	1/1:1,5:6:14.64:181,15,0	1/1:2,33:35:65.22:915,65,0	0/0:13,0:13:32.85:0,33,366	0/0:6,0:6:18.06:0,18,222	0/0:24,0:24:56.98:0,57,644	1/1:6,12:18:44.70:580,45,0	0/0:17,0:17:45.14:0,45,556	1/1:3,15:18:52.37:707,52,0	0/0:5,0:5:12.04:0,12,148
chr10	105313253	.	A	AC	900.73	PASS	AB=0.808;AC=6;AF=0.107;AN=56;BaseQRankSum=-4.369;DP=543;FS=16.775;HRun=8;HaplotypeScore=57.1398;InbreedingCoeff=0.5813;MQ=81.40;MQ0=0;MQRankSum=-0.350;QD=12.01;ReadPosRankSum=-1.979;VQSLOD=0.8351;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,116,1028	0/0:7,0:7:14.99:0,15,137	0/1:19,0:19:41.99:42,0,188	0/0:20,0:20:29.12:0,29,283	0/0:19,0:19:38.98:0,39,351	1/1:1,16:17:30.09:346,30,0	1/1:3,28:31:51.15:589,51,0	0/0:19,0:19:39:0,39,353	0/0:16,0:16:33.01:0,33,300	0/0:22,0:22:54.91:0,55,496	0/0:10,0:10:17.94:0,18,155	0/0:27,0:28:74.06:0,74,664	0/0:12,0:12:30:0,30,270	0/0:23,0:23:65.98:0,66,592	0/0:16,0:16:39.01:0,39,357	0/0:25,0:25:63.02:0,63,575	0/0:26,0:26:63.01:0,63,571	0/0:23,0:23:63:0,63,570	0/0:13,0:14:32.05:0,32,280	0/0:14,0:14:32.91:0,33,290	0/0:36,0:36:74.87:0,75,670	0/0:14,0:14:29.98:0,30,264	0/0:10,0:10:27.01:0,27,246	0/0:32,0:32:71.98:0,72,650	0/1:3,5:8:18.43:60,0,18	0/0:15,0:15:36:0,36,321	0/0:14,0:14:36.01:0,36,328	0/0:1,0:1:3:0,3,27
chr10	105314505	.	AGT	A	392.36	PASS	AB=0.961;AC=23;AF=0.523;AN=44;BaseQRankSum=3.950;DP=649;FS=2.450;HRun=0;HaplotypeScore=80.2674;InbreedingCoeff=-0.1975;MQ=69.35;MQ0=23;MQRankSum=-0.874;QD=1.08;ReadPosRankSum=-1.942;VQSLOD=1.4928;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:30:29.97:31,0,30	1/1:10,0:10:2.84:14,3,0	./.	./.	0/1:12,1:13:26.90:42,0,27	1/1:21,0:20:2.98:24,3,0	1/1:28,0:28:9.29:52,9,0	./.	0/1:24,0:25:13.02:13,0,143	0/0:20,0:20:5.93:0,6,61	0/0:11,0:11:6.02:0,6,86	0/1:22,0:22:55.04:55,0,62	0/1:18,0:17:17.65:18,0,36	0/1:19,0:19:15.13:15,0,58	0/1:23,1:22:30.42:30,0,108	0/1:22,1:23:13.59:14,0,131	0/0:24,0:23:9.03:0,9,131	./.	./.	./.	0/0:43,0:40:0:0,0,0	0/1:20,0:19:10.39:10,0,215	1/1:15,0:14:5.95:43,6,0	0/1:31,9:40:36.06:36,0,230	1/1:17,0:16:5.96:45,6,0	0/0:20,0:20:5.80:0,6,40	1/1:16,0:20:8.52:42,9,0	0/1:15,1:15:45.87:46,0,68
chr10	105319879	.	TACACACAC	T	1021.47	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=5.184;DP=750;FS=9.100;HRun=0;HaplotypeScore=169.2687;InbreedingCoeff=0.9091;MQ=57.15;MQ0=31;MQRankSum=-6.525;QD=13.10;ReadPosRankSum=-0.378;VQSLOD=2.1332;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:39:66.17:0,66,2020	./.	./.	0/0:39,0:10:2.98:0,3,22	0/0:16,0:16:30.09:0,30,943	1/1:5,11:17:15.05:359,15,0	1/1:20,19:39:21.07:493,21,0	0/0:29,0:29:27.06:0,27,437	0/0:20,0:23:36.11:0,36,1133	0/0:27,0:29:43.29:0,43,1131	0/0:13,0:13:24.07:0,24,794	0/0:45,0:45:84.27:0,84,2532	0/0:22,0:24:48.16:0,48,1833	0/0:29,0:29:42.13:0,42,1369	0/0:27,0:28:57.18:0,57,2069	0/0:24,0:25:51.06:0,51,1626	0/0:24,0:29:54.10:0,54,1785	0/0:19,0:21:35.92:0,36,1013	0/0:21,0:21:26.96:0,27,571	0/0:10,0:10:21.07:0,21,711	0/0:71,0:71:99:0,121,3466	0/0:16,0:16:36.12:0,36,1079	0/0:9,0:11:12.28:0,12,218	0/0:35,0:43:78.25:0,78,2687	1/1:7,15:22:12.04:303,12,0	0/0:22,0:26:54.16:0,54,1555	0/0:13,0:16:30.09:0,30,1086	0/0:14,0:16:45.15:0,45,1423
chr10	105322953	.	T	TA	1232.88	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=1.386;DP=454;FS=16.491;HRun=12;HaplotypeScore=50.2129;InbreedingCoeff=0.6627;MQ=60.50;MQ0=8;MQRankSum=-0.514;QD=7.66;ReadPosRankSum=-3.213;VQSLOD=-0.0626;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:50.37:0,50,376	1/1:3,5:7:3:29,3,0	0/0:12,0:8:16.49:0,16,90	0/1:10,0:6:9.97:10,0,33	0/0:29,2:31:4.21:0,4,357	1/1:5,14:19:35.65:330,36,0	1/1:6,11:15:8.16:241,8,0	1/1:34,0:29:20.45:132,20,0	0/0:9,0:8:20.86:0,21,150	0/0:15,0:16:28.86:0,29,203	0/0:15,0:15:29.75:0,30,217	0/0:12,0:12:32.81:0,33,239	0/0:10,0:11:14.84:0,15,109	0/0:13,0:13:0.50:0,1,110	0/0:19,0:16:35.76:0,36,261	0/0:11,0:11:29.82:0,30,219	0/0:33,0:29:62.58:0,63,456	0/0:28,0:24:47.70:0,48,350	0/1:17,0:16:11.63:12,0,14	1/1:10,0:10:8.22:32,8,0	1/1:4,0:3:1.77:4,2,0	0/0:3,0:3:8.93:0,9,64	0/0:6,0:6:14.91:0,15,109	0/0:7,0:7:11.90:0,12,86	1/1:3,21:25:63.10:613,63,0	0/0:23,0:21:50.68:0,51,370	1/1:16,0:15:3.99:9,4,0	0/0:13,0:14:31.87:0,32,225
chr10	105322965	.	AG	A	1962	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=1.880;DP=444;FS=0.000;HRun=1;HaplotypeScore=52.7740;InbreedingCoeff=0.8633;MQ=74.91;MQ0=5;MQRankSum=-0.051;QD=18.51;ReadPosRankSum=-4.771;VQSLOD=2.2034;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:69.07:0,69,766	1/1:8,0:7:9.36:64,9,0	0/1:16,0:13:6.27:6,0,128	0/0:16,0:12:20.54:0,21,203	0/0:26,0:26:69.02:0,69,804	0/0:16,0:15:20.51:0,21,198	0/0:15,0:14:38.41:0,38,276	1/1:18,14:32:62.16:937,62,0	0/0:9,0:9:24.06:0,24,284	0/0:16,0:16:46.66:0,47,512	0/0:18,0:18:48.02:0,48,502	0/0:12,0:12:36.09:0,36,423	0/0:11,0:11:26.99:0,27,290	0/0:14,0:14:19.42:0,19,330	0/0:16,0:15:42.03:0,42,492	0/0:14,0:13:39.02:0,39,430	0/0:29,0:27:78.05:0,78,870	0/0:23,0:21:57.16:0,57,687	1/1:3,14:17:42.17:491,42,0	1/1:1,10:11:32.87:318,33,0	1/1:0,6:6:6.02:83,6,0	0/0:3,0:3:9.03:0,9,113	0/0:7,0:7:21:0,21,213	0/0:4,0:4:12.04:0,12,151	0/0:25,0:25:67.76:0,68,434	0/0:21,0:20:54.08:0,54,624	1/1:0,16:16:18.02:243,18,0	0/0:15,0:15:38.83:0,39,446
chr10	105325657	.	G	GT	6434.44	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=2.593;DP=726;FS=0.316;HRun=7;HaplotypeScore=81.4405;InbreedingCoeff=0.9618;MQ=65.84;MQ0=0;MQRankSum=-1.272;QD=28.73;ReadPosRankSum=-1.733;VQSLOD=4.5272;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,105,1012	1/1:3,0:6:8.63:44,9,0	0/0:21,0:20:34.48:0,34,354	0/0:16,0:12:2.89:0,3,106	0/0:25,0:25:69.08:0,69,654	1/1:3,27:30:69.21:833,69,0	1/1:1,7:8:21.06:254,21,0	1/1:10,29:39:87.27:1048,87,0	0/0:25,0:25:69.11:0,69,666	0/0:34,0:34:90.14:0,90,869	0/0:20,0:20:54.06:0,54,514	0/0:22,0:22:66.11:0,66,637	0/0:15,0:15:42.07:0,42,405	0/0:18,0:18:54.09:0,54,521	0/0:32,0:32:81.12:0,81,782	0/0:28,0:28:75.11:0,75,724	0/0:30,0:30:78.07:0,78,745	0/0:24,0:24:66.09:0,66,630	1/1:7,26:33:78.19:911,78,0	1/1:3,29:32:87.27:1046,87,0	1/1:2,10:12:30.09:362,30,0	0/0:16,0:16:39.06:0,39,377	0/0:30,0:30:81.10:0,81,775	0/0:26,0:26:78.08:0,78,743	1/1:5,24:29:69.21:834,69,0	0/0:39,1:40:74.93:0,75,1007	1/1:2,32:35:93.12:1102,93,0	0/0:38,0:37:99:0,111,1072
chr10	105328320	.	T	TG	84.80	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.105;DP=606;FS=10.070;HRun=8;HaplotypeScore=70.4250;InbreedingCoeff=0.9486;MQ=80.55;MQ0=0;MQRankSum=-1.473;QD=10.60;ReadPosRankSum=-0.350;VQSLOD=1.4016;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:80.95:0,81,735	1/1:2,6:8:15.04:173,15,0	0/0:15,0:16:32.98:0,33,292	0/0:18,0:18:23.64:0,24,189	0/0:11,0:11:24.01:0,24,220	0/0:13,0:13:39.02:0,39,357	0/0:31,0:31:81.02:0,81,737	0/0:21,0:21:42:0,42,381	0/0:24,0:24:16.52:0,17,405	0/0:21,0:21:36:0,36,329	0/0:8,0:8:14.99:0,15,132	0/0:39,0:39:99:0,105,957	0/0:26,0:26:69.01:0,69,626	0/0:19,0:19:45.01:0,45,407	0/0:25,0:25:69.02:0,69,626	0/0:24,0:24:51:0,51,462	0/0:37,0:37:96:0,96,872	0/0:44,0:44:99:0,108,976	0/0:22,0:22:42.01:0,42,384	0/0:12,0:13:29.05:0,29,253	0/0:38,0:38:93:0,93,846	0/0:14,0:14:30:0,30,273	0/0:10,0:11:29.03:0,29,247	0/0:31,0:31:84.01:0,84,762	0/0:13,0:13:33.01:0,33,302	0/0:22,0:22:51.01:0,51,463	0/0:17,0:17:45.02:0,45,412	0/0:9,0:10:23.05:0,23,198
chr10	105329531	.	CTG	C	117.03	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=4.822;DP=449;FS=2.595;HRun=0;HaplotypeScore=69.6768;InbreedingCoeff=0.7068;MQ=96.94;MQ0=0;MQRankSum=-3.858;QD=4.50;ReadPosRankSum=0.836;VQSLOD=2.0404;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,2113	0/1:9,0:9:0.88:1,0,248	0/0:23,0:23:66.17:0,66,1223	0/0:22,0:22:51.91:0,52,1028	0/0:6,0:6:18.06:0,18,360	0/0:16,0:16:48.16:0,48,970	0/0:26,0:26:75.26:0,75,1514	1/1:1,0:1:3:27,3,0	0/0:20,0:20:60.18:0,60,1180	0/0:9,0:9:27.09:0,27,545	0/0:2,0:2:6.02:0,6,111	0/0:40,0:40:99:0,120,2355	0/0:23,0:23:69.24:0,69,1389	0/0:27,0:27:75.23:0,75,1447	0/0:13,0:13:39.13:0,39,792	0/0:22,0:22:66.23:0,66,1324	0/0:46,0:46:99:0,138,2760	0/0:20,0:20:60.21:0,60,1203	1/1:0,1:1:3:28,3,0	1/1:0,1:1:3:26,3,0	1/1:1,6:8:1.98:6,2,0	0/0:8,0:8:21.05:0,21,353	0/0:5,0:5:15.04:0,15,266	0/0:31,0:31:90.29:0,90,1773	0/0:9,0:9:24.08:0,24,465	0/0:15,0:15:42.14:0,42,824	1/1:0,6:6:18.01:162,18,0	0/0:3,0:3:9.01:0,9,128
chr10	105329534	.	CCGCCGTCAGTATCCAAGCCTACCA	C	1834.69	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=5.911;DP=453;FS=1.144;HRun=0;HaplotypeScore=286.1226;InbreedingCoeff=0.8500;MQ=98.80;MQ0=0;MQRankSum=-5.865;QD=114.67;ReadPosRankSum=2.109;VQSLOD=3.1654;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,9585	0/0:8,0:8:21.07:0,21,1511	0/0:26,0:26:75.26:0,75,5081	0/0:22,0:22:60.18:0,60,3803	0/0:6,0:6:18.06:0,18,1617	0/0:17,0:17:51.16:0,51,4953	0/0:24,0:24:72.25:0,72,6679	./.	0/0:20,0:20:60.21:0,60,6406	0/0:14,0:14:42.14:0,42,3683	0/0:4,0:4:12.04:0,12,682	0/0:39,0:39:99:0,117,10952	0/0:23,0:23:69.24:0,69,6767	0/0:24,0:24:69.24:0,69,7092	0/0:13,0:13:39.13:0,39,4350	0/0:21,0:21:63.22:0,63,7063	0/0:43,0:43:99:0,129,12413	0/0:19,0:19:57.20:0,57,5350	1/1:0,1:1:3.01:182,3,0	1/1:0,1:1:3.01:180,3,0	1/1:2,6:8:10.86:524,11,0	0/0:8,0:8:24.08:0,24,2174	0/0:4,0:4:12.03:0,12,826	0/0:31,0:31:90.27:0,90,8873	0/0:11,0:11:30.10:0,30,2237	0/0:17,0:17:51.18:0,51,4744	1/1:0,6:6:18.06:1085,18,0	0/0:4,0:4:12.04:0,12,1291
chr10	105331391	.	C	CTTTTG	7594.06	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.493;DP=673;FS=1.835;HRun=0;HaplotypeScore=118.8545;InbreedingCoeff=0.9915;MQ=75.75;MQ0=0;MQRankSum=-7.033;QD=56.25;ReadPosRankSum=-4.496;VQSLOD=3.9651;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:84.87:0,85,1872	1/1:0,7:7:18.06:522,18,0	0/0:25,0:25:56.86:0,57,857	0/0:22,0:22:49.65:0,50,909	0/0:13,0:13:30.10:0,30,583	0/0:25,0:24:63.10:0,63,1183	0/0:33,0:33:93.24:0,93,1705	1/1:7,24:40:99:2262,99,0	0/0:28,0:28:72.19:0,72,1387	0/0:18,0:18:54.18:0,54,1062	0/0:4,0:4:12.04:0,12,225	0/0:31,0:31:84.24:0,84,1626	0/0:30,0:30:81.24:0,81,1569	0/0:23,0:23:60.21:0,60,1182	0/0:31,0:31:84.23:0,84,1559	0/0:29,0:29:75.26:0,75,1498	0/0:37,0:37:99:0,105,1922	0/0:30,0:30:69.09:0,69,1168	1/1:5,9:18:36.08:726,36,0	1/1:2,10:14:30.10:804,30,0	1/1:1,21:24:42.14:1230,42,0	0/0:17,0:17:48.12:0,48,854	0/0:10,0:10:30.10:0,30,578	0/0:33,0:33:87.25:0,87,1642	0/0:14,0:14:33.11:0,33,667	0/0:35,0:35:90.28:0,90,1686	1/1:3,26:31:69.17:2052,69,0	0/0:11,0:11:27.09:0,27,548
chr10	105333440	.	CA	C	334.79	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=1.236;DP=411;FS=13.520;HRun=1;HaplotypeScore=65.7557;InbreedingCoeff=0.7790;MQ=77.07;MQ0=0;MQRankSum=-0.182;QD=6.83;ReadPosRankSum=1.785;VQSLOD=-0.7179;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:34.03:0,34,338	0/0:5,0:5:15:0,15,165	0/0:14,0:12:21.55:0,22,201	0/1:15,0:13:4.74:5,0,97	0/0:13,0:13:29.84:0,30,246	1/1:0,12:12:6.02:80,6,0	1/1:14,5:19:33:335,33,0	0/0:17,0:17:30.37:0,30,182	0/0:17,0:17:42.44:0,42,479	0/0:11,0:11:30.03:0,30,280	0/0:11,0:11:32.92:0,33,269	0/0:21,0:21:55.30:0,55,460	0/0:9,0:9:23.99:0,24,222	0/0:13,0:13:24.48:0,24,266	0/0:23,0:23:52.68:0,53,619	0/0:18,0:18:36.83:0,37,355	0/0:19,0:19:28.34:0,28,322	0/0:15,0:15:39.05:0,39,505	0/0:16,0:16:24.60:0,25,84	0/0:18,0:18:17.38:0,17,96	0/0:22,0:22:24.74:0,25,89	0/0:9,0:9:17.95:0,18,187	0/0:12,0:12:27.85:0,28,264	0/0:14,0:14:36.03:0,36,401	1/1:2,0:3:5.97:45,6,0	0/0:14,0:14:36.01:0,36,350	0/0:19,0:19:17.98:0,18,92	0/0:12,0:12:26.93:0,27,216
chr10	105333441	.	AG	A	1904.84	PASS	AB=0.921;AC=24;AF=0.444;AN=54;BaseQRankSum=7.557;DP=437;FS=25.189;HRun=12;HaplotypeScore=66.3372;InbreedingCoeff=0.2028;MQ=74.99;MQ0=0;MQRankSum=1.391;QD=6.71;ReadPosRankSum=3.859;VQSLOD=0.4421;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,1:25:15.03:15,0,51	0/0:5,0:5:6.01:0,6,61	0/1:11,1:11:31.53:32,0,68	0/0:15,0:13:4.47:0,4,45	0/0:12,1:13:2.38:0,2,55	1/1:14,0:14:5.80:35,6,0	0/1:19,0:19:49.05:49,0,89	1/1:4,12:16:35.74:278,36,0	0/1:15,3:18:42.66:43,0,156	./.	0/1:12,0:12:0:0,0,0	0/1:24,0:24:9.04:9,0,68	0/0:10,0:10:6:0,6,55	0/1:13,1:14:8.69:9,0,101	0/0:24,2:26:12.79:0,13,283	0/1:16,2:18:2.22:2,0,145	0/1:14,6:20:59.92:60,0,161	0/0:16,0:16:33:0,33,313	1/1:1,15:16:44.80:345,45,0	1/1:3,15:18:44.79:348,45,0	1/1:2,20:22:59.77:464,60,0	0/0:11,0:11:12:0,12,110	0/1:11,1:12:11.05:11,0,74	0/0:18,0:19:20.86:0,21,186	1/1:5,0:5:2.18:7,2,0	0/0:15,0:15:9:0,9,85	1/1:2,16:18:47.79:371,48,0	0/0:12,0:12:5.98:0,6,46
chr10	105334765	.	AG	A	2225.94	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.386;DP=636;FS=3.005;HRun=9;HaplotypeScore=68.5205;InbreedingCoeff=0.9484;MQ=78.87;MQ0=0;MQRankSum=2.254;QD=19.87;ReadPosRankSum=-0.283;VQSLOD=3.9247;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,1:51:77.62:0,78,1364	1/1:1,0:1:1.82:5,2,0	0/0:18,2:20:28.87:0,29,337	0/0:22,0:21:24.62:0,25,261	0/0:15,0:15:39.09:0,39,430	0/0:24,0:24:60.18:0,60,692	0/0:29,0:29:75.20:0,75,846	1/1:4,18:22:50.99:459,51,0	0/0:15,0:15:39.12:0,39,450	0/0:14,0:14:30.08:0,30,338	0/0:16,1:17:8.62:0,9,335	0/0:30,0:30:75.21:0,75,857	0/0:13,0:13:33.10:0,33,381	0/0:30,1:31:51.49:0,51,839	0/0:24,0:24:63.14:0,63,696	0/0:21,1:22:23.68:0,24,526	0/0:37,1:39:80.69:0,81,1164	0/0:33,2:35:38.32:0,38,937	1/1:3,14:17:41.99:378,42,0	1/1:3,9:12:25.08:244,25,0	1/1:7,29:36:78.04:714,78,0	0/0:17,0:17:36.08:0,36,390	0/0:19,0:19:45.08:0,45,483	0/0:28,1:29:53.76:0,54,863	0/0:15,0:17:38.76:0,39,390	0/0:27,0:27:69.20:0,69,796	1/1:2,22:24:66.03:604,66,0	0/0:13,0:14:41.94:0,42,454
chr10	105335904	.	TGTGTGC	T	2623.34	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.054;DP=954;FS=1.827;HRun=0;HaplotypeScore=182.5133;InbreedingCoeff=0.9147;MQ=51.78;MQ0=20;MQRankSum=-7.783;QD=17.03;ReadPosRankSum=-3.908;VQSLOD=2.8742;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,141,4453	0/0:10,0:10:24.08:0,24,812	0/0:73,0:22:44.18:0,44,1108	0/0:79,0:22:54.18:0,54,1580	0/0:26,0:26:72.09:0,72,2309	0/0:21,0:21:57.20:0,57,1925	0/0:37,0:37:99:0,99,3104	1/1:7,22:29:60.09:1078,60,0	0/0:29,0:29:78.27:0,78,2694	0/0:22,0:22:63.21:0,63,2007	0/0:18,0:18:48.07:0,48,1464	0/0:48,0:47:99:0,132,4313	0/0:28,0:28:66.14:0,66,2001	0/0:31,0:31:87.30:0,87,2928	0/0:32,0:32:87.28:0,87,2759	0/0:32,0:32:90.29:0,90,2827	0/0:39,0:38:99:0,111,3650	0/0:39,0:39:99:0,111,3572	1/1:6,15:21:44.67:829,45,0	1/1:4,18:21:2.27:67,2,0	1/1:8,52:59:3.94:70,4,0	0/0:29,0:29:69.24:0,69,2096	0/0:23,0:23:66.23:0,66,2199	0/0:52,0:52:99:0,138,4493	0/0:24,0:24:60.17:0,60,1961	0/0:32,0:32:90.30:0,90,2960	1/1:2,20:22:36.08:739,36,0	0/0:21,0:21:57.10:0,57,1714
chr10	105337806	.	CGT	C	388.92	PASS	AB=0.925;AC=19;AF=0.352;AN=54;BaseQRankSum=5.893;DP=873;FS=4.971;HRun=0;HaplotypeScore=131.5069;InbreedingCoeff=-0.2774;MQ=57.49;MQ0=7;MQRankSum=0.168;QD=0.80;ReadPosRankSum=0.866;VQSLOD=2.2992;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,1:50:7.63:0,8,734	0/1:19,0:19:3.35:3,0,270	0/0:43,0:17:0.47:0,0,1	./.	0/0:21,3:24:5.84:0,6,89	1/1:12,0:22:10.08:46,10,0	0/1:24,0:26:2.11:2,0,17	0/0:33,0:32:6.64:0,7,28	0/0:26,0:26:15.05:0,15,224	0/0:39,1:40:5.24:0,5,409	0/0:10,0:10:1.55:0,2,4	0/1:30,1:32:11.98:12,0,364	0/1:38,4:41:94.36:94,0,406	0/1:32,4:36:91.51:92,0,363	0/1:28,2:33:14.20:14,0,356	0/1:25,1:27:19.78:20,0,245	0/1:25,1:29:10.37:10,0,321	0/1:25,0:26:29.59:30,0,361	0/1:22,1:23:17.96:18,0,112	0/0:9,0:15:5.74:0,6,38	0/0:79,0:78:32.22:0,32,243	0/1:29,1:32:11.42:11,0,339	0/1:13,1:15:28.71:29,0,141	0/1:49,3:53:83.91:84,0,753	1/1:20,0:32:2.32:11,2,0	0/1:31,1:31:32.63:33,0,287	0/0:15,0:16:11.26:0,11,97	0/1:6,1:7:13.96:27,0,14
chr10	105339220	.	GA	G	141.60	PASS	AB=0.909;AC=3;AF=0.054;AN=56;BaseQRankSum=5.358;DP=590;FS=5.388;HRun=10;HaplotypeScore=67.7387;InbreedingCoeff=0.6848;MQ=85.36;MQ0=1;MQRankSum=-0.047;QD=4.72;ReadPosRankSum=-0.519;VQSLOD=0.7679;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,1:40:82.15:0,82,1103	1/1:1,9:10:26.99:234,27,0	0/0:31,1:29:34.73:0,35,452	0/0:24,0:23:25.64:0,26,298	0/0:18,0:18:51.08:0,51,535	0/0:18,0:18:48.12:0,48,523	0/0:19,0:19:57.14:0,57,623	0/0:27,2:30:19.91:0,20,652	0/0:26,1:27:40.12:0,40,663	0/0:20,0:20:48.12:0,48,525	0/0:17,0:17:42.05:0,42,443	0/0:17,1:19:30.99:0,31,554	0/0:16,0:16:48.13:0,48,531	0/0:24,0:24:60.16:0,60,663	0/0:29,1:30:55.15:0,55,823	0/0:25,0:26:47.76:0,48,665	0/0:16,0:16:48.13:0,48,531	0/0:23,0:23:60.14:0,60,654	0/0:24,0:24:41.56:0,42,568	0/0:19,0:20:41.91:0,42,432	0/0:14,0:15:38.96:0,39,404	0/1:18,2:20:7.01:7,0,370	0/0:17,0:17:39.11:0,39,431	0/0:17,0:17:42.07:0,42,451	0/0:12,0:12:30.06:0,30,317	0/0:22,0:22:49.36:0,49,519	0/0:21,0:21:60.13:0,60,646	0/0:12,0:12:33.09:0,33,365
chr10	105339534	.	AAGAAAAAAGAGAAAAAAG	A	1929.70	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.135;DP=593;FS=9.394;HRun=0;HaplotypeScore=264.4207;InbreedingCoeff=0.9531;MQ=58.39;MQ0=8;MQRankSum=-5.157;QD=30.15;ReadPosRankSum=2.024;VQSLOD=1.0926;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.28:0,81,6352	0/0:1,0:9:21.07:0,21,418	0/0:29,0:14:32.36:0,32,1079	0/0:30,0:14:31.80:0,32,1798	0/0:27,0:27:60.21:0,60,4001	1/1:5,14:19:18.06:885,18,0	1/1:14,16:28:15.05:737,15,0	0/0:11,0:11:24.08:0,24,629	0/0:18,0:18:33.11:0,33,2800	0/0:28,0:28:75.26:0,75,5996	0/0:19,0:19:45.15:0,45,3491	0/0:18,0:18:51.17:0,51,3723	0/0:22,0:22:57.20:0,57,4214	0/0:13,0:13:36.12:0,36,2663	0/0:25,0:25:66.21:0,66,4481	0/0:27,0:27:69.24:0,69,5161	0/0:30,0:30:78.25:0,78,5502	0/0:30,0:28:72.25:0,72,5392	0/0:16,0:19:33.11:0,33,790	0/0:7,0:14:36.12:0,36,911	0/0:6,0:6:12.04:0,12,192	0/0:20,0:20:54.18:0,54,3949	0/0:17,0:17:48.15:0,48,3376	0/0:21,0:21:54.19:0,54,4128	1/1:7,8:15:8.31:441,8,0	0/0:22,0:22:54.19:0,54,3781	0/0:14,0:24:51.16:0,51,1085	0/0:15,0:15:45.15:0,45,3327
chr10	105339541	.	AAG	A	994.30	PASS	AB=0.903;AC=10;AF=0.179;AN=56;BaseQRankSum=11.800;DP=596;FS=5.204;HRun=0;HaplotypeScore=91.9829;InbreedingCoeff=0.0056;MQ=59.96;MQ0=5;MQRankSum=-7.946;QD=7.10;ReadPosRankSum=0.346;VQSLOD=2.9940;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.29:0,84,1476	1/1:8,0:8:7.21:72,7,0	0/0:34,0:17:26.77:0,27,417	0/0:31,0:15:32.70:0,33,474	0/0:24,0:24:60.21:0,60,1049	0/1:17,0:17:12.17:55,0,12	0/1:27,0:26:29.75:30,0,92	0/1:5,7:12:99:225,0,128	0/0:16,0:16:45.12:0,45,726	0/0:30,0:30:84.28:0,84,1435	0/0:20,0:20:51.16:0,51,873	0/0:21,0:21:63.15:0,63,973	0/0:24,0:24:69.17:0,69,1099	0/0:14,0:14:39.12:0,39,663	0/0:25,0:25:69.17:0,69,1130	0/0:27,0:27:81.25:0,81,1372	0/0:29,0:29:84.23:0,84,1384	0/0:27,0:27:75.20:0,75,1295	0/1:19,2:20:65.45:279,0,65	0/1:12,2:14:99:195,0,108	0/1:7,1:8:48.44:48,0,130	0/0:25,0:25:74.64:0,75,1121	0/0:17,0:17:51.15:0,51,844	0/0:20,0:20:57.14:0,57,967	0/1:12,0:12:27.54:28,0,44	0/0:23,0:23:69.21:0,69,1117	0/1:19,2:21:99:210,0,161	0/0:21,0:21:63.09:0,63,933
chr10	105339616	.	AC	A	3218.15	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.320;DP=610;FS=6.578;HRun=5;HaplotypeScore=63.5025;InbreedingCoeff=0.9976;MQ=82.09;MQ0=0;MQRankSum=-2.685;QD=28.48;ReadPosRankSum=-0.034;VQSLOD=3.6999;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,1459	0/0:7,0:7:18.06:0,18,246	0/0:14,0:14:36.09:0,36,461	0/0:23,0:23:63.11:0,63,793	0/0:17,0:17:42.12:0,42,556	0/0:27,0:27:54.09:0,54,711	0/0:24,0:24:60.19:0,60,804	1/1:3,23:26:69.13:755,69,0	0/0:15,0:15:42.14:0,42,574	0/0:17,0:17:51.16:0,51,682	0/0:17,0:17:48.10:0,48,599	0/0:22,0:22:66.21:0,66,885	0/0:22,0:22:60.20:0,60,820	0/0:26,0:26:75.25:0,75,1023	0/0:24,0:24:69.23:0,69,943	0/0:26,0:26:72.24:0,72,984	0/0:34,0:34:99:0,102,1357	0/0:27,0:27:81.27:0,81,1103	1/1:0,14:14:42.08:462,42,0	1/1:0,17:17:42.12:476,42,0	1/1:0,33:33:81.23:919,81,0	0/0:16,0:16:48.16:0,48,654	0/0:19,0:19:54.18:0,54,738	0/0:26,0:26:66.20:0,66,871	0/0:13,0:12:23.99:0,24,304	0/0:23,0:23:69.23:0,69,942	1/1:0,23:23:69.20:782,69,0	0/0:19,0:19:57.19:0,57,779
chr10	105339787	.	C	CCCTCCT	13300.17	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.836;DP=563;FS=1.643;HRun=0;HaplotypeScore=129.6555;InbreedingCoeff=0.9891;MQ=74.04;MQ0=0;MQRankSum=-16.360;QD=83.65;ReadPosRankSum=-2.108;VQSLOD=5.6933;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,3150	1/1:0,3:3:9.03:329,9,0	0/0:19,0:19:54.05:0,54,1223	0/0:15,0:15:40.69:0,41,887	0/0:15,0:15:42.14:0,42,1034	1/1:6,14:22:63.17:2085,63,0	1/1:7,17:23:63.22:2183,63,0	1/1:22,8:32:87.23:2458,87,0	0/0:21,0:21:57.19:0,57,1351	0/0:18,0:18:54.15:0,54,1253	0/0:11,0:11:33.11:0,33,813	0/0:26,0:26:75.26:0,75,1844	0/0:14,0:14:42.13:0,42,946	0/0:21,0:21:60.21:0,60,1478	0/0:19,0:19:57.20:0,57,1400	0/0:21,0:21:63.22:0,63,1550	0/0:46,0:46:99:0,135,3271	0/0:40,0:40:99:0,114,2791	1/1:13,5:20:54.14:1580,54,0	1/1:2,5:8:18.06:620,18,0	1/1:4,9:18:27.09:986,27,0	0/0:16,0:16:48.16:0,48,1105	0/0:9,0:9:27.08:0,27,613	0/0:28,0:28:75.25:0,75,1764	1/1:5,15:21:51.18:1859,51,0	0/0:10,0:10:30.10:0,30,703	1/1:3,8:11:33.11:1201,33,0	0/0:11,0:11:33.11:0,33,784
chr10	105341032	.	T	TACCG	4982.84	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.675;DP=638;FS=0.484;HRun=0;HaplotypeScore=102.8269;InbreedingCoeff=0.9700;MQ=83.38;MQ0=1;MQRankSum=-3.227;QD=65.56;ReadPosRankSum=1.799;VQSLOD=7.0849;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,2293	0/0:4,0:4:12.04:0,12,224	0/0:25,0:25:66.22:0,66,1182	0/0:36,0:35:57.56:0,58,1537	0/0:19,0:19:54.17:0,54,970	1/1:1,22:23:63.22:1675,63,0	1/1:5,29:36:87.30:2270,87,0	0/0:25,0:25:66.19:0,66,1090	0/0:12,0:12:36.12:0,36,668	0/0:21,0:21:60.20:0,60,1087	0/0:9,0:9:27.08:0,27,466	0/0:18,0:18:42.10:0,42,748	0/0:24,0:24:57.18:0,57,1009	0/0:36,0:36:99:0,102,1772	0/0:17,0:17:39.12:0,39,697	0/0:18,0:18:54.17:0,54,968	0/0:36,0:36:99:0,99,1772	0/0:29,0:29:84.29:0,84,1556	0/0:19,0:19:48.14:0,48,812	0/0:4,0:4:9.49:0,9,132	0/0:43,0:43:99:0,115,2095	0/0:17,0:17:42.14:0,42,784	0/0:16,0:16:39.13:0,39,714	0/0:37,0:37:99:0,105,1885	1/1:1,14:17:39.13:1038,39,0	0/0:17,0:17:45.14:0,45,776	0/0:25,0:25:72.25:0,72,1334	0/0:10,0:10:27.09:0,27,504
chr10	105341802	.	ATGC	A	151.90	PASS	AB=0.778;AC=3;AF=0.063;AN=48;BaseQRankSum=4.329;DP=128;FS=13.686;HRun=0;HaplotypeScore=24.1425;InbreedingCoeff=0.1815;MQ=90.04;MQ0=1;MQRankSum=3.121;QD=10.85;ReadPosRankSum=-0.034;VQSLOD=1.1007;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:9.02:0,9,173	0/0:2,0:2:6.02:0,6,148	1/1:4,2:6:14.53:178,15,0	0/1:5,2:6:70.86:71,0,164	0/0:2,0:2:3.01:0,3,74	./.	0/0:11,0:11:33.11:0,33,798	0/0:6,0:6:18.05:0,18,388	./.	0/0:4,0:4:12.03:0,12,233	./.	0/0:1,0:1:3.01:0,3,50	0/0:1,0:1:3.01:0,3,74	0/0:1,0:1:3.01:0,3,74	0/0:1,0:1:3:0,3,25	0/0:1,0:1:3.01:0,3,74	0/0:13,0:13:39.13:0,39,920	0/0:11,0:11:33.07:0,33,726	0/0:5,0:5:15.04:0,15,306	0/0:1,0:1:3.01:0,3,74	0/0:25,0:24:66.23:0,66,1567	0/0:3,0:3:9.03:0,9,190	0/0:1,0:1:3.01:0,3,72	0/0:12,0:12:36.09:0,36,754	0/0:3,0:3:9.03:0,9,222	0/0:3,0:3:6.02:0,6,138	./.	0/0:3,0:3:8.99:0,9,106
chr10	105342631	.	C	CA	392.81	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.887;DP=481;FS=13.421;HRun=0;HaplotypeScore=66.6206;InbreedingCoeff=0.8934;MQ=56.96;MQ0=51;MQRankSum=-4.020;QD=11.55;ReadPosRankSum=0.091;VQSLOD=2.8764;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:71.43:0,71,794	0/0:4,0:4:5.68:0,6,28	0/0:65,0:14:25.99:0,26,288	0/0:64,0:12:18.92:0,19,142	0/0:11,0:10:21.04:0,21,258	1/1:6,7:13:15.17:163,15,0	1/1:3,7:10:29.03:197,29,0	0/0:15,0:11:22.75:0,23,160	0/0:17,0:14:30.04:0,30,330	0/0:12,0:11:21.01:0,21,238	0/0:7,0:7:12.02:0,12,124	0/0:8,0:7:15.89:0,16,163	0/0:12,0:11:20.41:0,20,229	0/0:10,0:10:21.04:0,21,245	0/0:12,0:12:21.02:0,21,247	0/0:21,0:21:48.81:0,49,518	0/0:19,0:18:51.06:0,51,624	0/0:11,0:11:29.10:0,29,274	0/0:13,0:12:30.04:0,30,363	0/0:8,0:8:11.98:0,12,113	0/0:12,0:11:20.80:0,21,202	0/0:12,0:9:17.81:0,18,163	0/0:13,0:12:20.94:0,21,193	0/0:14,0:14:29.08:0,29,333	1/1:2,9:11:24.82:173,25,0	0/0:8,0:6:8.98:0,9,83	0/0:14,0:12:30:0,30,342	0/0:37,0:21:18.06:0,18,238
chr10	105342632	.	C	CCT	814.66	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=5.440;DP=486;FS=9.107;HRun=0;HaplotypeScore=77.7217;InbreedingCoeff=0.7847;MQ=56.52;MQ0=53;MQRankSum=-5.468;QD=15.97;ReadPosRankSum=-0.187;VQSLOD=2.3584;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:71.92:0,72,811	1/1:0,0:4:6:54,6,0	0/0:66,0:14:30.76:0,31,282	0/0:64,0:13:15.75:0,16,150	0/1:12,0:11:3.29:3,0,194	1/1:7,7:14:9.94:269,10,0	1/1:3,7:10:27:307,27,0	0/0:15,0:11:10.38:0,10,120	0/0:17,0:14:30.04:0,30,348	0/0:12,0:11:18.03:0,18,219	0/0:7,0:7:9.02:0,9,107	0/0:8,0:7:20.91:0,21,222	0/0:13,0:12:24:0,24,278	0/0:11,0:10:17.91:0,18,220	0/0:12,0:12:20.83:0,21,261	0/0:20,0:20:45.03:0,45,513	0/0:19,0:18:51.11:0,51,650	0/0:11,0:11:27.88:0,28,294	0/0:14,0:13:30.54:0,31,379	0/0:7,0:7:8.99:0,9,90	0/0:13,0:12:20.83:0,21,213	0/0:12,0:9:14.82:0,15,145	0/0:13,0:12:20.81:0,21,195	0/0:13,0:13:26.66:0,27,330	1/1:0,9:11:29.68:332,30,0	0/0:8,0:6:5.99:0,6,61	0/0:14,0:12:30.02:0,30,367	0/0:37,0:21:18.53:0,19,232
chr10	105344926	.	GC	G	242.34	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.481;DP=609;FS=0.000;HRun=1;HaplotypeScore=63.6324;InbreedingCoeff=0.9385;MQ=82.51;MQ0=0;MQRankSum=-1.119;QD=26.93;ReadPosRankSum=0.390;VQSLOD=3.3167;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,2248	1/1:0,9:9:24.06:336,24,0	0/0:19,0:19:48.06:0,48,852	0/0:17,0:17:20.59:0,21,677	0/0:26,0:26:75.24:0,75,1171	0/0:23,0:23:69.24:0,69,1098	0/0:32,0:32:96.31:0,96,1507	0/0:19,0:19:57.19:0,57,911	0/0:14,0:14:42.14:0,42,671	0/0:15,0:15:45.15:0,45,717	0/0:5,0:5:9.03:0,9,144	0/0:18,0:18:54.18:0,54,859	0/0:25,0:25:72.25:0,72,1146	0/0:24,0:24:72.25:0,72,1151	0/0:26,0:26:78.24:0,78,1214	0/0:25,0:25:75.26:0,75,1199	0/0:33,0:33:96.31:0,96,1506	0/0:22,0:22:66.20:0,66,1028	0/0:21,0:21:63.21:0,63,993	0/0:20,0:20:60.19:0,60,926	0/0:37,0:37:99:0,111,1692	0/0:21,0:21:59.78:0,60,953	0/0:18,0:18:54.18:0,54,863	0/0:27,0:26:81.28:0,81,1291	0/0:10,0:10:30.09:0,30,443	0/0:26,0:26:75.26:0,75,1197	0/0:19,0:19:57.19:0,57,911	0/0:11,0:11:33.10:0,33,504
chr10	105345578	.	CGT	C	3532.98	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.528;DP=730;FS=0.000;HRun=0;HaplotypeScore=84.2516;InbreedingCoeff=0.9997;MQ=85.05;MQ0=0;MQRankSum=-1.321;QD=37.99;ReadPosRankSum=1.148;VQSLOD=5.7677;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,157,2809	1/1:0,14:14:29.89:441,30,0	0/0:24,0:24:72.23:0,72,1254	0/0:23,0:23:48.56:0,49,997	0/0:24,0:24:69.24:0,69,1284	1/1:0,23:23:57.19:839,57,0	1/1:0,37:37:99:1546,105,0	0/0:30,0:30:84.29:0,84,1562	0/0:25,0:25:75.26:0,75,1404	0/0:32,0:32:96.32:0,96,1743	0/0:12,0:12:36.12:0,36,663	0/0:32,0:32:84.29:0,84,1550	0/0:21,0:21:57.16:0,57,1031	0/0:22,0:22:57.20:0,57,1059	0/0:35,0:35:99:0,99,1802	0/0:37,0:37:99:0,111,2057	0/0:29,0:28:84.24:0,84,1494	0/0:28,0:28:84.29:0,84,1563	0/0:28,0:28:81.28:0,81,1504	0/0:17,0:17:51.15:0,51,884	0/0:39,0:39:99:0,114,2061	0/0:15,0:15:42.14:0,42,768	0/0:18,0:17:45.15:0,45,842	0/0:31,0:31:93.30:0,93,1677	1/1:0,19:19:48.16:707,48,0	0/0:19,0:19:51.17:0,51,926	0/0:32,0:32:96.32:0,96,1768	0/0:12,0:12:33.11:0,33,618
chr10	105346048	.	GTATC	G	294.01	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.082;DP=565;FS=1.397;HRun=0;HaplotypeScore=91.2638;InbreedingCoeff=0.9613;MQ=73.63;MQ0=0;MQRankSum=-1.261;QD=36.75;ReadPosRankSum=0.628;VQSLOD=3.8866;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,111,2858	1/1:0,7:8:21.07:386,21,0	0/0:8,0:8:12.04:0,12,275	0/0:13,0:13:30.10:0,30,624	0/0:25,0:25:72.25:0,72,1895	0/0:12,0:12:33.11:0,33,871	0/0:20,0:20:48.16:0,48,1261	0/0:24,0:24:63.22:0,63,1634	0/0:19,0:19:57.20:0,57,1482	0/0:19,0:19:54.17:0,54,1372	0/0:12,0:12:33.58:0,34,814	0/0:21,0:21:60.21:0,60,1570	0/0:16,0:16:45.15:0,45,1164	0/0:22,0:22:60.21:0,60,1536	0/0:22,0:22:63.22:0,63,1658	0/0:20,0:20:60.21:0,60,1572	0/0:34,0:34:96.30:0,96,2444	0/0:24,0:24:69.24:0,69,1732	0/0:27,0:27:66.23:0,66,1730	0/0:12,0:12:33.11:0,33,866	0/0:49,0:49:99:0,138,3559	0/0:17,0:17:51.18:0,51,1303	0/0:8,0:8:21.07:0,21,550	0/0:27,0:27:78.27:0,78,2049	0/0:17,0:17:51.18:0,51,1347	0/0:16,0:16:48.16:0,48,1261	0/0:13,0:13:39.13:0,39,994	0/0:18,0:18:54.18:0,54,1322
chr10	105348552	.	G	GT	63.18	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.567;DP=623;FS=5.422;HRun=9;HaplotypeScore=67.0122;InbreedingCoeff=0.9792;MQ=71.08;MQ0=0;MQRankSum=-0.213;QD=7.90;ReadPosRankSum=-1.092;VQSLOD=1.4578;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,135,1143	1/1:1,7:8:14.99:152,15,0	0/0:18,0:18:23.87:0,24,255	0/0:15,0:15:26:0,26,184	0/0:27,0:27:65.46:0,65,567	0/0:19,0:19:44.99:0,45,390	0/0:12,0:12:35.99:0,36,312	0/0:36,0:36:92.94:0,93,802	0/0:12,0:12:26.94:0,27,224	0/0:24,0:24:59.35:0,59,502	0/0:19,0:19:56.99:0,57,493	0/0:27,0:28:74.01:0,74,628	0/0:24,0:24:68.85:0,69,585	0/0:16,0:16:47.97:0,48,413	0/0:28,0:28:77.97:0,78,677	0/0:25,0:26:74.01:0,74,628	0/0:29,0:29:83.96:0,84,723	0/0:28,0:28:57.42:0,57,593	0/0:21,0:21:56.97:0,57,493	0/0:20,0:20:50.96:0,51,439	0/0:20,0:20:44.99:0,45,391	0/0:21,0:21:50.96:0,51,439	0/0:17,0:17:47.94:0,48,405	0/0:19,0:19:53.94:0,54,462	0/0:23,0:23:59.23:0,59,491	0/0:25,0:25:62.97:0,63,547	0/0:24,0:24:65.99:0,66,573	0/0:14,0:14:41.99:0,42,365
chr10	105348746	.	TCC	T	273.40	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.651;DP=710;FS=3.112;HRun=3;HaplotypeScore=84.9378;InbreedingCoeff=0.9977;MQ=83.94;MQ0=0;MQRankSum=-1.134;QD=22.78;ReadPosRankSum=2.028;VQSLOD=1.8542;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,2665	1/1:0,12:12:23.63:367,24,0	0/0:23,0:23:66.14:0,66,1218	0/0:24,0:23:63.65:0,64,1128	0/0:26,0:26:75.22:0,75,1341	0/0:17,0:17:51.17:0,51,985	0/0:28,0:28:83.65:0,84,1558	0/0:39,0:39:99:0,108,1959	0/0:20,0:20:60.19:0,60,1127	0/0:25,0:25:72.20:0,72,1294	0/0:21,0:21:63.22:0,63,1215	0/0:37,0:37:99:0,111,2086	0/0:18,0:18:54.19:0,54,1042	0/0:16,0:16:45.15:0,45,868	0/0:40,0:40:99:0,117,2216	0/0:30,0:31:92.65:0,93,1631	0/0:32,0:32:93.32:0,93,1794	0/0:18,0:18:54.19:0,54,1043	0/0:16,0:16:48.16:0,48,926	0/0:23,0:23:69.24:0,69,1315	0/0:33,0:33:96.32:0,96,1822	0/0:23,0:23:63.20:0,63,1172	0/0:21,0:21:63.16:0,63,1146	0/0:24,0:24:72.20:0,72,1332	0/0:19,0:19:57.20:0,57,1101	0/0:33,0:33:96.24:0,96,1813	0/0:29,0:29:87.28:0,87,1618	0/0:15,0:15:45.15:0,45,869
chr10	105349175	.	C	CCTCT	453.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.357;DP=758;FS=8.902;HRun=0;HaplotypeScore=121.2575;InbreedingCoeff=0.9951;MQ=80.99;MQ0=0;MQRankSum=-1.370;QD=41.26;ReadPosRankSum=0.600;VQSLOD=3.9759;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,154,2753	1/1:3,7:11:21.07:546,21,0	0/0:22,0:22:57.15:0,57,936	0/0:16,0:16:31.66:0,32,523	0/0:21,0:21:60.21:0,60,1090	0/0:29,0:29:81.28:0,81,1472	0/0:24,0:24:63.20:0,63,1115	0/0:21,0:21:51.15:0,51,845	0/0:21,0:21:57.18:0,57,1001	0/0:32,0:32:87.29:0,87,1554	0/0:27,0:27:72.25:0,72,1303	0/0:29,0:29:78.25:0,78,1387	0/0:33,0:33:93.30:0,93,1661	0/0:29,0:29:72.23:0,72,1279	0/0:45,0:45:99:0,123,2200	0/0:28,0:28:75.23:0,75,1300	0/0:38,0:38:99:0,102,1816	0/0:21,0:21:63.22:0,63,1139	0/0:26,0:26:72.20:0,72,1221	0/0:17,0:17:51.16:0,51,893	0/0:42,0:42:99:0,108,1842	0/0:25,0:25:75.26:0,75,1362	0/0:23,0:23:63.22:0,63,1146	0/0:32,0:32:87.29:0,87,1532	0/0:24,0:24:69.22:0,69,1226	0/0:30,0:30:90.28:0,90,1604	0/0:24,0:24:69.22:0,69,1212	0/0:10,0:10:30.10:0,30,546
chr10	105350211	.	CA	C	895.20	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.258;DP=349;FS=4.873;HRun=3;HaplotypeScore=36.8604;InbreedingCoeff=0.9572;MQ=95.79;MQ0=0;MQRankSum=-3.664;QD=28.88;ReadPosRankSum=1.568;VQSLOD=2.5082;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.20:0,69,956	0/0:7,0:7:21.07:0,21,302	0/0:15,0:14:34.84:0,35,501	0/0:24,0:24:59.92:0,60,824	0/0:4,0:4:9.03:0,9,129	1/1:0,11:11:30.09:372,30,0	1/1:1,10:11:33.10:405,33,0	0/0:20,0:20:60.19:0,60,848	0/0:20,0:20:60.20:0,60,864	0/0:6,0:6:18.06:0,18,259	0/0:4,0:4:12.04:0,12,173	0/0:15,0:15:45.14:0,45,632	0/0:15,0:15:45.15:0,45,647	0/0:13,0:13:39.12:0,39,543	0/0:11,0:11:33.08:0,33,452	0/0:9,0:9:27.09:0,27,389	0/0:14,0:14:39.13:0,39,561	0/0:8,0:8:21.07:0,21,302	0/0:12,0:12:36.12:0,36,518	0/0:8,0:8:24.08:0,24,345	0/0:26,0:26:75.25:0,75,1080	0/0:9,0:9:27.08:0,27,373	0/0:10,0:10:30.10:0,30,431	0/0:11,0:11:33.07:0,33,452	1/1:1,8:9:21.07:260,21,0	0/0:14,0:14:42.14:0,42,605	0/0:13,0:13:39.13:0,39,561	0/0:6,0:6:18.06:0,18,259
chr10	105350970	.	T	TC	213.87	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.914;DP=716;FS=2.862;HRun=5;HaplotypeScore=72.2863;InbreedingCoeff=0.9975;MQ=85.40;MQ0=0;MQRankSum=-1.636;QD=19.44;ReadPosRankSum=-0.574;VQSLOD=3.1383;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,1325	1/1:1,10:11:24.08:307,24,0	0/0:29,0:26:59.98:0,60,597	0/0:22,0:22:43.10:0,43,436	0/0:21,0:21:60.15:0,60,639	0/0:24,0:24:69.17:0,69,741	0/0:23,0:23:63.16:0,63,676	0/0:29,0:29:81.19:0,81,863	0/0:23,0:23:69.15:0,69,726	0/0:33,0:33:90.22:0,90,961	0/0:16,0:16:42.10:0,42,450	0/0:31,0:31:81.19:0,81,863	0/0:19,0:19:54.14:0,54,580	0/0:24,0:24:69.17:0,69,741	0/0:36,0:36:87.18:0,87,912	0/0:25,0:25:66.16:0,66,708	0/0:28,0:28:78.19:0,78,837	0/0:30,0:30:75.11:0,75,774	0/0:21,0:21:51.06:0,51,515	0/0:12,0:12:33.08:0,33,353	0/0:38,0:38:99:0,99,1056	0/0:13,0:13:36.09:0,36,386	0/0:19,0:19:54.11:0,54,562	0/0:38,0:38:99:0,105,1118	0/0:22,0:22:63.15:0,63,669	0/0:35,0:35:99:0,99,1059	0/0:26,0:26:72.15:0,72,753	0/0:23,0:23:60.15:0,60,643
chr10	105351402	.	TG	T	33.70	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.926;DP=448;FS=0.000;HRun=2;HaplotypeScore=46.9379;InbreedingCoeff=0.8491;MQ=75.40;MQ0=0;MQRankSum=-1.725;QD=6.74;ReadPosRankSum=0.289;VQSLOD=0.5780;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.18:0,57,834	1/1:0,5:5:9.03:117,9,0	0/0:6,0:6:15.05:0,15,203	0/0:11,0:11:27.06:0,27,346	0/0:9,0:9:24.08:0,24,359	0/0:14,0:14:36.11:0,36,520	0/0:25,0:25:72.24:0,72,1077	0/0:12,0:12:33.11:0,33,494	0/0:15,0:15:45.15:0,45,674	0/0:9,0:9:21.07:0,21,314	0/0:10,0:10:24.07:0,24,339	0/0:34,0:34:99:0,99,1460	0/0:16,0:16:48.16:0,48,717	0/0:20,0:20:51.17:0,51,764	0/0:7,0:7:21.07:0,21,314	0/0:7,0:7:21.07:0,21,315	0/0:21,0:21:63.21:0,63,941	0/0:28,0:28:81.26:0,81,1193	0/0:19,0:19:54.18:0,54,806	0/0:9,0:9:24.08:0,24,360	0/0:65,0:65:99:0,187,2670	0/0:5,0:5:12.04:0,12,179	0/0:4,0:4:12.04:0,12,179	0/0:28,0:28:78.26:0,78,1167	0/0:11,0:11:33.10:0,33,477	0/0:20,0:20:57.18:0,57,832	0/0:10,0:10:30.10:0,30,449	0/0:8,0:8:24.08:0,24,360
chr10	105353616	.	ATTTTGTTTTGTTTTG	A	1994.12	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.515;DP=727;FS=2.907;HRun=0;HaplotypeScore=272.1965;InbreedingCoeff=0.8848;MQ=59.97;MQ0=7;MQRankSum=-7.447;QD=24.62;ReadPosRankSum=0.720;VQSLOD=2.6430;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:81.28:0,81,4854	1/1:5,0:10:5.87:209,6,0	0/0:21,0:12:7.27:0,7,131	0/0:38,0:22:14.19:0,14,423	0/0:24,0:24:60.21:0,60,3659	1/1:9,20:29:32.98:1160,33,0	1/1:13,13:26:3.01:125,3,0	0/0:31,0:31:45.15:0,45,1764	0/0:35,0:35:60.21:0,60,3725	0/0:29,0:28:60.20:0,60,3633	0/0:22,0:23:45.63:0,46,2746	0/0:30,0:30:69.24:0,69,4035	0/0:19,0:19:27.08:0,27,1660	0/0:21,0:21:39.13:0,39,2451	0/0:25,0:25:48.16:0,48,2686	0/0:32,0:32:69.24:0,69,4753	0/0:29,0:29:60.21:0,60,3913	0/0:26,0:25:60.21:0,60,3682	0/0:27,0:27:38.49:0,38,2242	0/0:27,0:27:63.22:0,63,4147	0/0:29,0:30:54.14:0,54,2794	0/0:13,0:13:21.07:0,21,1457	0/0:25,0:25:54.17:0,54,3170	0/0:29,0:29:57.13:0,57,3603	1/1:9,7:16:17.99:643,18,0	0/0:28,0:28:60.21:0,60,3628	0/0:31,0:31:69.24:0,69,4509	0/0:15,0:15:30.10:0,30,2041
chr10	105355956	.	G	GAA	437.81	PASS	AB=0.917;AC=8;AF=0.143;AN=56;BaseQRankSum=-0.181;DP=436;FS=2.673;HRun=14;HaplotypeScore=65.7524;InbreedingCoeff=0.6667;MQ=60.41;MQ0=12;MQRankSum=-0.220;QD=5.69;ReadPosRankSum=-1.386;VQSLOD=-0.4666;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:29:38.14:0,38,309	0/0:0,0:4:8.23:0,8,35	0/0:9,0:5:5.83:0,6,46	0/0:13,0:7:16.88:0,17,104	0/0:17,0:23:34.82:0,35,289	1/1:6,15:23:20.43:244,20,0	1/1:4,7:15:17.41:183,17,0	0/0:28,0:31:7.59:0,8,182	0/0:12,0:15:14.22:0,14,140	0/0:12,0:12:11.50:0,12,87	0/0:14,0:13:23.84:0,24,200	0/0:12,0:12:26.72:0,27,212	0/0:10,0:10:20.93:0,21,176	0/0:5,0:5:5.64:0,6,43	0/0:14,0:16:17.64:0,18,186	0/0:4,0:7:11.69:0,12,87	0/0:26,0:28:57.96:0,58,446	0/0:20,0:24:30.48:0,30,275	0/0:14,0:15:41.67:0,42,334	0/0:11,0:12:26.31:0,26,199	0/0:14,0:18:22.95:0,23,202	0/0:6,0:4:5.90:0,6,50	0/1:6,0:7:0.20:0,0,42	0/0:10,0:12:11.60:0,12,87	1/1:3,8:13:14.36:146,14,0	0/0:19,0:22:35.38:0,35,282	0/0:15,0:15:23.53:0,24,186	0/1:15,0:17:1.08:1,0,154
chr10	105356193	.	C	CAGAT	392.67	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.847;DP=496;FS=3.809;HRun=0;HaplotypeScore=81.5335;InbreedingCoeff=0.9803;MQ=76.58;MQ0=0;MQRankSum=-4.184;QD=43.63;ReadPosRankSum=1.062;VQSLOD=3.7784;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.28:0,81,1537	1/1:1,6:9:18.06:483,18,0	0/0:11,0:11:33.10:0,33,569	0/0:9,0:9:17.82:0,18,262	0/0:20,0:20:54.06:0,54,1025	0/0:13,0:12:36.01:0,36,579	0/0:21,0:21:63.17:0,63,1090	0/0:36,0:35:99:0,99,1791	0/0:23,0:23:57.18:0,57,1036	0/0:20,0:20:60.18:0,60,1098	0/0:14,0:14:39.10:0,39,677	0/0:24,0:24:63.21:0,63,1156	0/0:10,0:10:30.09:0,30,537	0/0:13,0:13:36.11:0,36,636	0/0:21,0:21:63.20:0,63,1129	0/0:13,0:13:36.11:0,36,634	0/0:16,0:16:45.12:0,45,817	0/0:16,0:16:45.15:0,45,854	0/0:15,0:15:39.13:0,39,710	0/0:16,0:16:48.16:0,48,911	0/0:22,0:22:63.20:0,63,1162	0/0:10,0:10:27.08:0,27,480	0/0:21,0:21:57.18:0,57,1042	0/0:10,0:10:30.10:0,30,550	0/0:19,0:19:57.16:0,57,1016	0/0:24,0:24:72.24:0,72,1338	0/0:29,0:29:81.28:0,81,1536	0/0:10,0:10:30.10:0,30,560
chr10	105364153	.	GATTT	G	788.11	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.394;DP=330;FS=0.926;HRun=0;HaplotypeScore=50.5310;InbreedingCoeff=0.5293;MQ=58.34;MQ0=2;MQRankSum=3.577;QD=21.30;ReadPosRankSum=3.554;VQSLOD=2.9096;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:29.89:0,30,625	0/0:4,0:4:3.01:0,3,72	0/0:7,0:3:3.01:0,3,70	0/0:10,0:6:3.90:0,4,74	0/0:15,0:15:30.10:0,30,700	1/1:2,15:17:33.11:531,33,0	1/1:3,3:5:6.02:97,6,0	0/0:33,0:33:51.17:0,51,1165	0/0:8,0:8:12.04:0,12,289	0/0:12,0:12:15.05:0,15,361	0/0:11,0:11:12.04:0,12,263	0/0:9,0:9:9.03:0,9,217	0/0:8,0:8:3.01:0,3,72	0/0:11,0:11:18.05:0,18,386	0/0:6,0:6:6.02:0,6,122	0/0:15,0:15:15.05:0,15,325	0/0:25,0:25:42.13:0,42,949	0/0:21,0:21:36.12:0,36,868	0/0:16,0:16:24.04:0,24,526	0/0:13,0:13:6.02:0,6,145	0/0:3,0:2:3.01:0,3,72	0/0:4,0:4:3.01:0,3,72	0/0:4,0:4:3.01:0,3,72	0/0:2,0:2:3.01:0,3,70	1/1:6,8:14:18.06:289,18,0	0/0:16,0:16:27.09:0,27,650	0/0:15,0:15:14.99:0,15,261	0/0:9,0:9:15.05:0,15,361
chr10	105364569	.	GCA	G	1040.52	PASS	AB=0.944;AC=21;AF=0.404;AN=52;BaseQRankSum=7.414;DP=588;FS=1.095;HRun=0;HaplotypeScore=83.2176;InbreedingCoeff=-0.1840;MQ=56.68;MQ0=7;MQRankSum=1.700;QD=2.39;ReadPosRankSum=-0.229;VQSLOD=1.5304;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:45,0:45:55.33:55,0,524	1/1:3,0:5:2.84:14,3,0	./.	./.	0/1:13,0:13:24.11:24,0,70	1/1:12,9:21:23.79:218,24,0	1/1:21,14:38:37.32:511,37,0	0/1:13,0:12:14.09:14,0,15	0/1:17,1:19:36.50:37,0,247	0/1:15,0:15:18.08:18,0,84	0/0:14,0:14:9.01:0,9,114	0/1:25,2:28:40.21:40,0,357	0/0:16,0:16:1.25:0,1,205	0/0:25,0:26:24.81:0,25,426	0/0:25,0:25:15.52:0,16,423	0/1:20,1:22:11.19:11,0,375	0/1:29,11:41:56.80:57,0,497	0/0:28,0:28:22.85:0,23,445	0/1:13,1:16:40.38:40,0,135	0/1:9,0:8:11.73:12,0,115	0/1:54,1:53:19.87:20,0,577	0/0:8,0:8:6.02:0,6,89	0/0:14,0:14:2.30:0,2,217	0/1:43,6:49:30.32:30,0,762	1/1:11,3:13:6.01:66,6,0	0/1:29,1:28:27.63:28,0,270	0/0:10,0:10:2.66:0,3,191	0/0:7,0:6:0:0,0,0
chr10	105366810	.	GGA	G	323.52	PASS	AB=0.868;AC=11;AF=0.204;AN=54;BaseQRankSum=5.692;DP=192;FS=4.458;HRun=0;HaplotypeScore=47.6483;InbreedingCoeff=-0.3133;MQ=52.94;MQ0=2;MQRankSum=-4.647;QD=3.64;ReadPosRankSum=-0.993;VQSLOD=1.4150;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:12.14:0,12,387	0/0:1,0:1:3.01:0,3,57	0/0:13,0:4:8.86:0,9,128	0/0:16,0:6:7.66:0,8,129	0/0:9,0:9:23.57:0,24,406	0/0:7,0:7:21.07:0,21,378	0/0:4,0:4:12:0,12,188	0/1:4,2:6:46.44:58,0,46	0/1:11,2:13:53.90:54,0,488	0/1:10,1:11:34.71:35,0,369	./.	0/0:6,0:6:17.63:0,18,262	0/1:4,1:5:44.86:45,0,119	0/0:2,0:2:6:0,6,81	0/1:6,1:7:24.82:25,0,277	0/1:5,1:6:28.14:28,0,173	0/0:7,0:7:15.05:0,15,283	0/0:2,0:2:3.01:0,3,57	0/0:4,0:4:9.02:0,9,141	0/1:10,2:12:72.82:73,0,381	0/0:4,0:4:9.03:0,9,170	0/1:8,2:10:74.06:74,0,253	0/1:4,0:4:14.18:14,0,48	0/0:6,0:6:12.04:0,12,226	0/1:8,1:9:30.94:31,0,338	0/0:7,0:7:21.03:0,21,309	0/1:5,1:6:27.78:28,0,262	0/0:1,0:1:3.01:0,3,57
chr10	105370835	.	TC	T	1852.82	PASS	AB=0.927;AC=22;AF=0.393;AN=56;BaseQRankSum=6.947;DP=480;FS=1.341;HRun=11;HaplotypeScore=63.3704;InbreedingCoeff=0.4445;MQ=75.36;MQ0=2;MQRankSum=-1.167;QD=7.88;ReadPosRankSum=2.007;VQSLOD=2.2301;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,1:27:22.34:22,0,357	0/0:2,0:2:3.01:0,3,32	0/0:21,1:18:9.45:0,9,146	0/0:35,1:34:19.10:0,19,262	0/1:12,2:15:47.33:47,0,182	1/1:3,0:23:38.66:112,39,0	1/1:7,0:34:51.86:163,52,0	1/1:5,12:17:38.77:309,39,0	0/0:12,0:12:2.44:0,2,225	0/1:4,1:5:18.63:19,0,26	0/0:12,0:12:21.03:0,21,215	0/0:11,0:11:21.03:0,21,209	0/1:5,0:5:12.44:12,0,76	0/0:14,0:14:14.76:0,15,159	0/0:24,0:24:29.46:0,29,502	0/0:16,0:16:5.46:0,5,263	0/0:27,0:27:54.05:0,54,551	0/0:27,2:29:7.84:0,8,478	1/1:6,13:20:37.19:284,37,0	1/1:2,6:8:17.93:142,18,0	1/1:8,21:31:66.25:507,66,0	0/0:9,0:9:15.01:0,15,150	0/1:4,0:4:10.91:11,0,77	0/0:22,3:25:1.01:0,1,386	1/1:4,0:15:20.36:59,20,0	0/1:13,1:14:16.62:17,0,189	1/1:2,15:17:41.94:344,42,0	0/0:6,0:6:15.04:0,15,160
chr10	105370907	.	GGT	G	709.83	PASS	AB=0.938;AC=23;AF=0.460;AN=50;BaseQRankSum=5.219;DP=525;FS=7.242;HRun=0;HaplotypeScore=74.8137;InbreedingCoeff=-0.0833;MQ=66.16;MQ0=6;MQRankSum=1.393;QD=1.93;ReadPosRankSum=1.839;VQSLOD=0.0336;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,1:24:34.51:35,0,60	1/1:4,0:6:5.89:28,6,0	./.	./.	0/0:14,0:14:5.98:0,6,69	1/1:10,0:12:5.56:28,6,0	1/1:32,0:34:13.03:64,13,0	0/1:22,0:20:13.71:14,0,15	1/1:11,3:14:5.85:46,6,0	0/1:18,0:18:13.67:14,0,95	0/1:11,3:14:42:70,0,42	0/0:13,0:13:1.74:0,2,83	0/0:11,0:11:6.02:0,6,89	0/0:10,0:10:5.97:0,6,63	0/0:16,0:19:0.93:0,1,161	0/1:20,4:23:48.36:82,0,48	0/0:23,0:23:15.01:0,15,172	0/1:23,2:26:96.88:97,0,147	1/1:24,0:20:2.01:24,2,0	0/1:17,0:17:3.96:4,0,235	0/1:36,3:38:99:132,0,129	./.	0/1:11,0:11:13.47:13,0,17	0/1:32,3:35:52.17:52,0,400	1/1:13,0:18:20.01:104,20,0	0/1:23,1:24:39.14:56,0,39	0/0:13,0:13:11.93:0,12,117	0/0:6,0:4:3.01:0,3,44
chr10	105372501	.	GCA	G	278.32	PASS	AB=0.913;AC=16;AF=0.308;AN=52;BaseQRankSum=2.167;DP=657;FS=4.926;HRun=0;HaplotypeScore=93.3072;InbreedingCoeff=-0.2762;MQ=62.61;MQ0=11;MQRankSum=1.151;QD=0.82;ReadPosRankSum=0.878;VQSLOD=1.5871;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:31.50:0,31,627	1/1:7,0:6:2.84:14,3,0	./.	./.	0/0:9,0:10:3.92:0,4,163	0/1:17,0:17:0:0,0,0	0/0:40,0:39:7.20:0,7,44	0/0:18,0:17:17.81:0,18,139	0/1:30,3:33:99:104,0,393	0/1:22,2:24:11.65:12,0,200	0/0:8,0:8:3.01:0,3,45	0/0:21,2:24:30.08:0,30,408	0/1:15,1:15:38.19:38,0,222	0/1:14,2:15:11.60:12,0,184	0/1:35,3:38:8.16:8,0,617	0/1:20,2:23:8.60:9,0,242	0/1:25,6:31:82.41:82,0,445	0/1:29,4:33:39.43:39,0,586	0/0:17,0:19:23.77:0,24,217	0/0:12,0:18:12.01:0,12,123	0/0:51,0:63:92.97:0,93,844	0/1:15,1:19:23.63:24,0,41	0/1:13,1:14:20.60:21,0,101	0/1:35,3:38:23.15:23,0,471	0/0:16,0:16:5.49:0,5,24	0/1:22,1:22:8.70:9,0,198	0/0:7,0:19:32.91:0,33,294	0/1:3,1:4:26.60:27,0,39
chr10	105372542	.	CA	C	346.76	PASS	AB=0.860;AC=4;AF=0.071;AN=56;BaseQRankSum=5.836;DP=796;FS=2.390;HRun=1;HaplotypeScore=93.3844;InbreedingCoeff=0.4818;MQ=62.73;MQ0=27;MQRankSum=-1.175;QD=6.54;ReadPosRankSum=-0.928;VQSLOD=0.3388;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:96.19:0,96,1324	1/1:2,0:2:2.99:23,3,0	0/0:62,0:23:62.41:0,62,746	0/0:62,0:28:83.05:0,83,974	0/0:14,0:14:28.64:0,29,395	0/1:14,1:14:0:0,0,0	0/1:26,10:32:70.67:414,0,71	0/0:25,0:24:71.03:0,71,910	0/0:45,0:45:99:0,122,1513	0/0:23,0:23:68.23:0,68,864	0/0:8,0:8:18.05:0,18,225	0/0:31,0:31:75.21:0,75,1001	0/0:24,0:23:61.26:0,61,796	0/0:22,0:21:50.20:0,50,682	0/0:35,0:35:99:0,100,1371	0/0:35,0:35:92.28:0,92,1182	0/0:30,0:30:74.35:0,74,964	0/0:31,0:31:85.49:0,85,1131	0/0:20,0:20:60.19:0,60,818	0/0:11,0:11:21.05:0,21,251	0/0:87,0:84:99:0,198,2487	0/0:14,0:14:29.11:0,29,335	0/0:15,0:15:32.12:0,32,402	0/0:36,0:36:91.34:0,91,1219	0/0:15,0:15:7.06:0,7,35	0/0:23,0:22:61:0,61,736	0/0:29,0:28:75.20:0,75,898	0/0:9,0:9:23.10:0,23,282
chr10	105373162	.	TC	T	2205.32	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.151;DP=635;FS=7.966;HRun=5;HaplotypeScore=60.2095;InbreedingCoeff=0.9958;MQ=82.26;MQ0=0;MQRankSum=-1.264;QD=27.92;ReadPosRankSum=1.940;VQSLOD=3.7860;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.12:0,96,1306	0/0:13,0:13:36.09:0,36,473	0/0:13,0:13:33.10:0,33,426	0/0:25,0:25:66.16:0,66,833	0/0:31,0:31:93.28:0,93,1235	1/1:0,26:26:63.18:715,63,0	1/1:0,30:30:84.24:953,84,0	0/0:33,0:33:87.25:0,87,1150	0/0:21,0:21:60.20:0,60,820	0/0:18,0:18:51.17:0,51,686	0/0:6,0:6:18.04:0,18,229	0/0:19,0:19:54.18:0,54,734	0/0:23,0:23:69.23:0,69,944	0/0:19,0:19:57.19:0,57,779	0/0:31,0:31:90.28:0,90,1202	0/0:20,0:20:60.20:0,60,820	0/0:30,0:30:84.26:0,84,1115	0/0:36,0:36:96.30:0,96,1292	0/0:25,0:25:69.22:0,69,929	0/0:9,0:9:27.09:0,27,366	0/0:52,0:52:99:0,147,1956	0/0:12,0:12:33.11:0,33,449	0/0:15,0:15:45.14:0,45,596	0/0:22,0:22:60.20:0,60,813	1/1:1,22:23:60.17:681,60,0	0/0:24,0:24:69.17:0,69,906	0/0:16,0:15:45.15:0,45,615	0/0:8,0:8:24.08:0,24,327
chr10	105374123	.	C	CGTGTGT	4197.52	PASS	AC=40;AF=0.909;AN=44;BaseQRankSum=-1.509;DP=422;FS=5.703;HRun=0;HaplotypeScore=107.2117;InbreedingCoeff=0.3168;MQ=69.29;MQ0=9;MQRankSum=-1.286;QD=12.38;ReadPosRankSum=-0.727;VQSLOD=1.6442;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,5:30:6.01:135,6,0	0/0:5,0:5:9.03:0,9,149	./.	./.	./.	1/1:21,0:21:12:220,12,0	1/1:20,0:20:22.37:310,22,0	1/1:30,0:28:22.57:288,23,0	1/1:3,0:9:9.03:191,9,0	1/1:22,0:22:27.07:521,27,0	0/0:7,1:11:0.21:0,0,0	1/1:11,0:11:9.03:189,9,0	1/1:6,1:7:4.24:100,4,0	1/1:1,5:6:3.01:39,3,0	1/1:3,1:5:3.01:97,3,0	1/1:4,3:7:6.02:156,6,0	1/1:15,10:28:12:272,12,0	1/1:21,9:32:12.04:374,12,0	1/1:15,0:13:9.03:216,9,0	./.	1/1:21,0:20:5:75,5,0	./.	./.	1/1:5,4:9:3.01:55,3,0	1/1:16,0:16:2.94:20,3,0	1/1:22,0:22:30.03:473,30,0	1/1:8,8:19:18.02:373,18,0	1/1:4,3:7:3.01:93,3,0
chr10	105374155	.	T	TGTGT	2248	PASS	AB=1.000;AC=39;AF=0.929;AN=42;BaseQRankSum=0.000;DP=368;FS=2.643;HRun=0;HaplotypeScore=91.3437;InbreedingCoeff=0.3502;MQ=51.01;MQ0=9;MQRankSum=-0.787;QD=7.07;ReadPosRankSum=-0.689;VQSLOD=2.3992;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:5.95:90,6,0	0/0:10,0:10:9.03:0,9,107	./.	./.	./.	1/1:22,0:22:6.02:98,6,0	1/1:23,0:23:21.31:263,21,0	1/1:17,0:16:20.18:253,20,0	1/1:10,0:10:6.02:109,6,0	1/1:15,0:15:15.52:209,16,0	1/1:9,0:9:0.47:1,0,0	1/1:10,0:10:9.03:153,9,0	1/1:7,0:7:4.53:56,5,0	1/1:6,0:6:3.01:39,3,0	./.	1/1:6,0:6:6.02:91,6,0	1/1:27,0:27:6.91:90,7,0	1/1:28,0:27:16.30:288,16,0	0/1:9,0:7:0:0,0,0	./.	1/1:31,0:29:5.92:90,6,0	./.	./.	1/1:9,0:9:3.01:36,3,0	1/1:18,0:17:8.52:78,9,0	1/1:14,5:20:14.99:210,15,0	1/1:18,0:18:8.95:139,9,0	1/1:4,0:4:3.01:49,3,0
chr10	105376800	.	A	ACGATGCTTC	1777.26	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-1.148;DP=575;FS=1.913;HRun=0;HaplotypeScore=156.2384;InbreedingCoeff=0.9067;MQ=78.37;MQ0=0;MQRankSum=-5.894;QD=33.53;ReadPosRankSum=-3.377;VQSLOD=3.1059;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:57.16:0,57,1375	0/0:2,0:8:12.04:0,12,243	0/0:19,0:18:25.72:0,26,507	0/0:19,0:19:21.78:0,22,679	0/0:12,0:12:24.05:0,24,483	1/1:6,4:11:6.02:125,6,0	1/1:14,17:31:39.13:1547,39,0	0/0:29,0:29:36.11:0,36,721	0/0:26,0:26:69.22:0,69,1617	0/0:15,0:15:23.87:0,24,613	0/0:11,0:11:27.08:0,27,522	0/0:25,0:25:57.18:0,57,1500	0/0:24,0:24:51.18:0,51,1312	0/0:26,0:26:51.15:0,51,1288	0/0:21,0:21:45.15:0,45,1203	0/0:21,0:21:42.10:0,42,944	0/0:22,0:22:45.15:0,45,1207	0/0:23,0:23:63.17:0,63,1597	0/0:26,0:26:20.56:0,21,381	0/0:9,0:9:18.06:0,18,438	0/0:57,0:57:99:0,114,2721	0/0:13,0:13:15.05:0,15,349	0/0:10,0:10:18.03:0,18,386	0/0:36,0:36:87.28:0,87,2268	1/1:9,2:11:9.03:234,9,0	0/0:16,0:16:36.11:0,36,887	0/0:17,0:17:42.14:0,42,1111	0/0:7,0:7:15.05:0,15,385
chr10	105379251	.	CT	C	640.48	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=7.437;DP=381;FS=2.295;HRun=10;HaplotypeScore=41.6245;InbreedingCoeff=0.8734;MQ=66.38;MQ0=4;MQRankSum=-1.304;QD=16.01;ReadPosRankSum=1.379;VQSLOD=3.6165;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:52.94:0,53,658	./.	0/0:28,0:9:12.03:0,12,128	0/0:29,0:14:11.32:0,11,169	0/0:15,1:16:19.07:0,19,438	1/1:4,10:14:26.99:234,27,0	1/1:2,11:13:29.99:260,30,0	0/0:27,0:27:54.14:0,54,590	0/0:9,0:9:24.06:0,24,265	0/0:19,0:18:19.15:0,19,435	0/0:4,0:4:6.02:0,6,66	0/0:10,0:10:30.05:0,30,313	0/0:7,0:7:18.05:0,18,199	0/0:10,0:10:27.07:0,27,299	0/0:15,0:15:39.04:0,39,410	0/0:10,0:10:27.07:0,27,299	0/0:18,0:18:48.07:0,48,508	0/0:7,0:7:20.96:0,21,204	0/0:19,1:20:16.05:0,16,399	0/0:14,0:14:33.09:0,33,363	0/0:12,0:12:24.06:0,24,265	0/0:3,0:3:5.96:0,6,52	0/0:6,0:8:17.83:0,18,165	0/0:3,0:3:9.02:0,9,99	1/1:2,11:13:32.99:286,33,0	0/0:16,0:16:39.11:0,39,431	0/0:16,0:16:45.11:0,45,489	0/0:12,0:12:36.10:0,36,398
chr10	105380763	.	GT	G	1330.94	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.027;DP=573;FS=4.600;HRun=3;HaplotypeScore=70.1570;InbreedingCoeff=0.9907;MQ=74.14;MQ0=4;MQRankSum=-2.163;QD=16.43;ReadPosRankSum=3.514;VQSLOD=3.2811;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:92.71:0,93,1161	1/1:2,10:12:24.03:274,24,0	0/0:32,0:18:15.47:0,15,216	0/0:13,0:9:19.35:0,19,136	0/0:28,0:28:81.12:0,81,942	1/1:21,0:21:53.80:445,54,0	1/1:21,1:22:44.99:394,45,0	0/0:33,0:33:80.93:0,81,993	0/0:16,0:16:23.09:0,23,343	0/0:29,0:29:80.03:0,80,1009	0/0:23,0:23:57.58:0,58,792	0/0:12,0:12:29.11:0,29,355	0/0:12,0:12:18.95:0,19,369	0/0:16,0:16:38.35:0,38,526	0/0:21,0:21:54.41:0,54,658	0/0:17,0:17:45.14:0,45,612	0/0:34,0:34:99:0,102,1324	0/0:14,0:14:34.57:0,35,384	0/0:18,0:18:46.73:0,47,487	0/0:26,0:26:64.11:0,64,716	0/0:12,0:12:33.13:0,33,378	0/0:14,0:14:34.58:0,35,398	0/0:16,0:16:47.93:0,48,556	0/0:14,0:14:29.31:0,29,409	1/1:26,0:26:44.94:378,45,0	0/0:21,0:21:51.45:0,51,662	0/0:19,0:19:56.91:0,57,670	0/0:17,0:17:48.09:0,48,595
chr10	105380765	.	TTA	T	2063.41	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.553;DP=572;FS=1.070;HRun=0;HaplotypeScore=77.0319;InbreedingCoeff=0.9961;MQ=74.84;MQ0=4;MQRankSum=1.465;QD=26.12;ReadPosRankSum=5.715;VQSLOD=4.1694;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,103,1735	1/1:10,0:10:20.05:94,20,0	0/0:34,0:18:31.51:0,32,344	0/0:14,0:10:20.27:0,20,209	0/0:27,0:27:81.19:0,81,1285	1/1:0,20:21:54.18:823,54,0	1/1:1,20:22:44.36:655,44,0	0/0:33,0:33:93.20:0,93,1517	0/0:16,0:16:47.91:0,48,541	0/0:28,0:28:81.22:0,81,1398	0/0:25,0:25:74.90:0,75,1206	0/0:10,0:10:30.06:0,30,506	0/0:12,0:12:35.85:0,36,549	0/0:15,0:15:43.67:0,44,723	0/0:23,0:23:69.10:0,69,1034	0/0:15,0:15:45.15:0,45,863	0/0:34,0:34:99:0,102,1822	0/0:14,0:14:41.93:0,42,572	0/0:18,0:18:51:0,51,641	0/0:24,0:24:71.11:0,71,1056	0/0:12,0:12:36.07:0,36,582	0/0:12,0:12:36.07:0,36,579	0/0:18,0:18:54.01:0,54,809	0/0:13,0:13:39.04:0,39,615	1/1:2,23:26:23.26:651,23,0	0/0:22,0:22:63.10:0,63,925	0/0:20,0:20:39.46:0,39,922	0/0:19,0:19:57.09:0,57,903
chr10	105380766	.	TA	T	457.46	PASS	AB=0.895;AC=12;AF=0.214;AN=56;BaseQRankSum=9.575;DP=578;FS=0.948;HRun=13;HaplotypeScore=73.1552;InbreedingCoeff=0.4610;MQ=73.20;MQ0=4;MQRankSum=-1.710;QD=3.15;ReadPosRankSum=2.367;VQSLOD=-0.1100;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:89.20:0,89,807	1/1:10,0:10:18.92:82,19,0	0/0:35,0:17:0.44:0,0,102	0/0:14,0:10:14.32:0,14,92	0/0:24,0:27:53.57:0,54,470	1/1:21,0:21:46.80:183,47,0	1/1:22,0:22:39.70:160,40,0	0/0:32,0:34:63.39:0,63,688	0/0:14,0:16:0.05:0,0,113	0/0:26,1:28:44.18:0,44,581	0/0:25,1:26:21.14:0,21,495	0/0:9,1:10:2.13:0,2,182	0/1:10,2:12:13.17:13,0,203	0/0:14,1:15:11.31:0,11,251	0/0:19,2:22:15.98:0,16,432	0/0:16,0:16:39.06:0,39,378	0/0:35,0:36:89.86:0,90,834	0/1:11,3:14:35.63:36,0,174	0/1:15,1:16:1.17:1,0,135	0/1:23,1:24:18:18,0,347	0/0:11,1:12:5.13:0,5,207	0/0:12,0:12:9.16:0,9,227	0/0:20,0:20:38.91:0,39,335	0/0:13,0:13:8.06:0,8,225	1/1:26,0:26:17.30:128,17,0	0/0:24,0:24:30.33:0,30,350	0/0:16,0:19:26.80:0,27,355	0/0:19,0:19:45.04:0,45,422
chr10	105381189	.	CT	C	1094.04	PASS	AB=0.908;AC=8;AF=0.143;AN=56;BaseQRankSum=6.584;DP=554;FS=5.934;HRun=10;HaplotypeScore=60.0402;InbreedingCoeff=0.7194;MQ=63.30;MQ0=1;MQRankSum=0.092;QD=11.89;ReadPosRankSum=3.195;VQSLOD=3.0485;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:50:99:0,123,1279	0/1:10,1:11:1.99:2,0,206	0/0:11,0:11:9.18:0,9,177	0/0:11,0:10:30.01:0,30,297	0/1:16,2:18:3.94:4,0,416	1/1:2,18:20:47.98:417,48,0	1/1:3,22:25:53.48:452,53,0	0/0:34,0:34:75.66:0,76,820	0/0:16,0:16:45.11:0,45,490	0/0:29,0:29:69.15:0,69,745	0/0:19,0:19:48.11:0,48,522	0/0:16,0:16:38.99:0,39,431	0/0:8,0:8:18.05:0,18,199	0/0:14,0:14:21.04:0,21,223	0/0:20,0:20:48.09:0,48,517	0/0:15,1:16:13.87:0,14,343	0/0:34,0:34:98.98:0,99,1061	0/0:28,0:28:69.09:0,69,726	0/0:16,0:16:17.85:0,18,370	0/0:21,0:21:51.14:0,51,563	0/0:12,0:12:30.08:0,30,332	0/0:19,0:19:41.85:0,42,441	0/0:20,0:21:53.20:0,53,624	0/0:17,2:19:2.03:0,2,479	1/1:2,16:16:41.89:364,42,0	0/0:22,0:22:39.99:0,40,433	0/0:12,0:12:27.07:0,27,298	0/0:14,0:13:24.06:0,24,265
chr10	105381667	.	T	TCTCC	462.08	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.581;DP=706;FS=6.049;HRun=0;HaplotypeScore=114.6290;InbreedingCoeff=0.9014;MQ=85.96;MQ0=0;MQRankSum=-1.048;QD=46.21;ReadPosRankSum=0.558;VQSLOD=4.3468;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,153,2719	1/1:1,7:10:21.07:554,21,0	0/0:21,0:21:54.16:0,54,907	0/0:27,0:27:72.03:0,72,1165	0/0:26,0:26:69.21:0,69,1207	0/0:26,0:26:78.24:0,78,1368	0/0:27,0:27:78.27:0,78,1421	0/0:27,0:27:69.22:0,69,1211	0/0:24,0:24:72.25:0,72,1298	0/0:32,0:32:93.31:0,93,1683	0/0:17,0:17:48.16:0,48,882	0/0:26,0:26:69.20:0,69,1206	0/0:20,0:20:57.18:0,57,1017	0/0:30,0:30:84.29:0,84,1516	0/0:21,0:21:57.18:0,57,1006	0/0:27,0:27:81.28:0,81,1483	0/0:25,0:25:75.22:0,75,1317	0/0:22,0:22:57.17:0,57,1017	0/0:22,0:22:57.17:0,57,954	0/0:20,0:20:57.18:0,57,1013	0/0:34,0:34:96.31:0,96,1719	0/0:22,0:22:63.22:0,63,1151	0/0:21,0:21:57.19:0,57,1048	0/0:34,0:34:96.31:0,96,1725	0/0:22,0:22:63.20:0,63,1124	0/0:30,0:30:90.29:0,90,1598	0/0:36,0:36:99:0,108,1909	0/0:3,0:3:6.02:0,6,110
chr10	105382466	.	GGT	G	214.05	PASS	AB=0.946;AC=16;AF=0.308;AN=52;BaseQRankSum=2.924;DP=522;FS=20.383;HRun=0;HaplotypeScore=106.5725;InbreedingCoeff=-0.0938;MQ=69.10;MQ0=7;MQRankSum=-0.833;QD=0.95;ReadPosRankSum=2.369;VQSLOD=0.7235;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:23.72:24,0,70	0/0:4,0:4:0.47:0,0,1	./.	./.	0/0:11,0:10:3.01:0,3,45	1/1:17,0:18:5.21:25,5,0	1/1:20,0:19:2.79:15,3,0	0/0:27,0:27:19.23:0,19,194	0/1:23,0:23:18.33:18,0,183	0/1:15,1:16:20.29:20,0,45	0/0:10,0:10:3.01:0,3,45	0/1:10,0:10:10.55:11,0,37	0/1:18,1:19:31.43:70,0,31	0/0:11,0:10:11.34:0,11,132	0/1:12,1:13:33:33,0,95	0/1:21,1:22:26.42:26,0,259	0/0:31,0:30:14.14:0,14,312	0/0:31,0:31:4.94:0,5,284	0/0:15,0:15:9.43:0,9,96	0/0:9,0:9:2.65:0,3,43	0/0:36,0:37:9.11:0,9,65	0/1:7,0:8:19.19:19,0,39	0/0:16,0:16:9.03:0,9,128	0/1:26,1:27:13.06:13,0,155	1/1:8,0:10:6.93:31,7,0	0/0:19,0:18:8.90:0,9,66	0/0:8,0:14:9.01:0,9,94	0/1:8,2:10:34.34:56,0,34
chr10	105382507	.	GTA	G	172.33	PASS	AB=0.973;AC=16;AF=0.286;AN=56;BaseQRankSum=3.592;DP=472;FS=53.976;HRun=0;HaplotypeScore=150.4468;InbreedingCoeff=0.1296;MQ=47.90;MQ0=18;MQRankSum=-4.366;QD=0.87;ReadPosRankSum=-1.205;VQSLOD=0.5867;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,4:32:6.10:0,6,269	1/1:2,0:2:0.89:2,1,0	0/0:26,0:5:3.87:0,4,24	0/0:25,0:3:2.16:0,2,8	0/0:14,0:13:11.95:0,12,118	1/1:15,0:15:5.18:24,5,0	1/1:23,0:20:16.02:70,16,0	0/0:19,0:19:9.94:0,10,235	0/1:16,1:17:26.84:27,0,308	0/0:12,0:12:7.55:0,8,271	0/0:14,0:13:9:0,9,99	0/1:13,0:11:0.66:1,0,77	0/1:15,1:16:57.87:58,0,107	0/0:8,0:8:8.64:0,9,83	0/1:15,2:17:19.35:19,0,205	0/1:22,0:22:22.31:22,0,206	0/1:25,0:23:40.30:40,0,334	0/0:19,0:19:10.47:0,10,276	0/0:11,0:9:20.99:0,21,205	0/0:7,0:6:5.60:0,6,44	0/0:34,0:33:11.25:0,11,200	0/0:13,0:13:17.94:0,18,166	0/0:8,0:8:15.01:0,15,185	0/1:29,0:29:18.08:18,0,274	1/1:14,0:14:6.99:34,7,0	0/0:16,0:13:16.86:0,17,196	0/0:13,0:12:20.74:0,21,171	0/1:6,0:6:11.52:12,0,58
chr10	105382523	.	TTC	T	722.23	PASS	AB=0.987;AC=18;AF=0.321;AN=56;BaseQRankSum=-1.363;DP=463;FS=14.245;HRun=0;HaplotypeScore=153.1646;InbreedingCoeff=0.1115;MQ=55.89;MQ0=11;MQRankSum=-3.034;QD=2.66;ReadPosRankSum=-3.126;VQSLOD=1.0320;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:24.86:0,25,405	1/1:1,0:1:3:27,3,0	0/1:31,0:11:7.07:7,0,187	0/1:37,2:12:47.91:48,0,82	0/0:13,0:12:12.91:0,13,138	1/1:8,9:17:10.66:159,11,0	1/1:9,13:20:23.91:292,24,0	0/0:14,0:13:11.56:0,12,237	0/1:21,0:21:48.94:49,0,314	0/0:14,0:14:30.35:0,30,272	0/0:14,0:14:13.77:0,14,126	0/0:11,0:10:8.75:0,9,102	0/1:12,0:12:21.18:21,0,143	0/0:4,1:5:9:0,9,87	0/0:15,0:15:27.04:0,27,277	0/1:16,0:16:9.18:9,0,206	0/1:25,0:23:5.60:6,0,299	0/1:17,0:17:6.70:7,0,237	0/0:12,0:12:11.08:0,11,164	0/0:5,0:5:5.14:0,5,44	0/0:24,2:26:18.37:0,18,244	0/0:12,0:12:20.64:0,21,203	0/0:10,0:10:15.54:0,16,127	0/1:29,0:29:15.78:16,0,341	1/1:5,9:14:2.02:230,2,0	0/1:17,0:16:12.17:12,0,209	0/1:10,1:10:1.14:1,0,155	0/0:5,0:5:8.98:0,9,82
chr10	105382706	.	T	TGG	117.09	PASS	AB=0.933;AC=8;AF=0.143;AN=56;BaseQRankSum=-0.233;DP=465;FS=37.025;HRun=0;HaplotypeScore=68.8681;InbreedingCoeff=0.2646;MQ=37.22;MQ0=77;MQRankSum=1.804;QD=1.48;ReadPosRankSum=-1.965;VQSLOD=-0.1257;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:27:78.19:0,78,922	0/1:6,0:5:0.91:1,0,11	0/0:31,0:8:19.67:0,20,183	0/0:36,0:13:1.09:0,1,167	0/0:22,0:21:57.18:0,57,760	0/0:17,0:17:33.09:0,33,397	0/0:16,0:14:39.12:0,39,484	0/1:11,0:6:21.27:68,0,21	0/0:6,0:6:18.06:0,18,227	0/0:23,0:16:48.15:0,48,598	0/0:15,0:15:39.12:0,39,480	0/0:6,0:4:6.02:0,6,74	0/0:12,0:11:23.81:0,24,267	0/0:9,0:7:21.06:0,21,250	0/0:11,0:11:27.08:0,27,347	0/0:11,0:9:21.07:0,21,269	0/0:30,0:28:38.65:0,39,599	0/0:19,0:17:36.11:0,36,469	1/1:34,0:3:8.21:43,8,0	0/1:7,4:10:20.68:73,0,21	1/1:6,0:4:1.95:22,2,0	0/0:4,0:3:3.01:0,3,38	0/0:14,0:12:36.11:0,36,449	0/0:7,0:5:9.03:0,9,119	0/0:19,0:16:44.47:0,44,517	0/0:14,0:12:36.10:0,36,433	0/1:11,0:11:34.94:35,0,48	0/0:33,0:29:46.86:0,47,842
chr10	105383691	.	T	TCTTTCAAAATGAATGAAACTGCATCTC	1974.09	PASS	AB=0.699;AC=26;AF=0.929;AN=28;BaseQRankSum=-1.575;DP=34;FS=8.900;HRun=0;HaplotypeScore=44.8030;InbreedingCoeff=-0.2512;MQ=178.63;MQ0=0;MQRankSum=0.175;QD=59.82;ReadPosRankSum=-0.725;VQSLOD=-0.1231;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:3.01:69,3,0	./.	0/1:5,1:11:33.67:1263,0,34	0/1:4,0:6:12:157,0,12	./.	1/1:1,0:1:3.01:49,3,0	./.	1/1:3,0:3:8.99:129,9,0	1/1:1,0:1:3.01:71,3,0	./.	./.	./.	1/1:1,0:1:2.98:21,3,0	./.	1/1:1,0:1:3.01:86,3,0	1/1:1,0:1:2.98:22,3,0	1/1:1,0:1:3.01:48,3,0	./.	./.	1/1:1,0:1:3.01:72,3,0	1/1:2,0:2:2.99:24,3,0	1/1:1,0:1:3:25,3,0	./.	./.	./.	./.	1/1:1,0:1:2.99:24,3,0	./.
chr10	105386015	.	GAC	G	7536.87	PASS	AB=0.940;AC=38;AF=0.679;AN=56;BaseQRankSum=0.818;DP=664;FS=0.430;HRun=0;HaplotypeScore=90.4509;InbreedingCoeff=0.6632;MQ=66.31;MQ0=9;MQRankSum=-0.011;QD=14.44;ReadPosRankSum=3.713;VQSLOD=4.7071;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,20:42:36.10:418,36,0	0/0:12,0:12:2.97:0,3,20	0/0:33,2:23:14.65:0,15,222	0/1:37,1:26:12.05:12,0,265	1/1:9,8:17:18.05:209,18,0	0/0:18,0:18:36.04:0,36,385	0/0:30,0:30:45.53:0,46,495	1/1:11,9:21:29.89:305,30,0	1/1:9,18:27:54.16:627,54,0	0/0:17,0:18:31:0,31,640	0/1:14,1:15:1.74:2,0,409	1/1:9,7:16:21.06:244,21,0	1/1:3,9:12:24.07:279,24,0	1/1:11,15:27:50.98:571,51,0	1/1:13,26:39:63.19:732,63,0	0/1:23,4:28:84.27:84,0,744	1/1:9,23:34:68.87:759,69,0	1/1:8,10:18:23.41:308,23,0	1/1:18,8:26:24.07:278,24,0	1/1:11,9:20:30.09:348,30,0	1/1:11,19:30:51.15:592,51,0	1/1:10,8:19:23.90:258,24,0	1/1:9,5:14:15.04:174,15,0	1/1:7,20:28:18.25:631,18,0	0/1:21,0:21:51.39:51,0,128	0/0:23,0:23:18.95:0,19,602	1/1:9,18:29:59.84:655,60,0	0/0:6,0:6:9.01:0,9,117
chr10	105386043	.	A	AC	197.58	PASS	AB=0.770;AC=3;AF=0.054;AN=56;BaseQRankSum=4.275;DP=681;FS=5.775;HRun=0;HaplotypeScore=112.6226;InbreedingCoeff=-0.0642;MQ=70.84;MQ0=10;MQRankSum=0.337;QD=3.47;ReadPosRankSum=1.732;VQSLOD=3.1303;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,120,1451	0/0:3,0:3:3:0,3,25	0/0:39,0:26:75.22:0,75,1006	0/0:43,0:30:78.67:0,79,1008	0/0:18,0:18:42.11:0,42,537	0/1:12,6:18:57.61:119,0,58	0/1:13,9:22:99:122,0,135	0/0:30,0:30:87.06:0,87,1092	0/0:31,0:31:81.22:0,81,1006	0/0:33,0:33:84.20:0,84,1085	0/0:19,0:19:56.85:0,57,684	0/0:14,0:14:39.10:0,39,476	0/0:13,0:13:39.12:0,39,505	0/0:25,0:25:75.24:0,75,990	0/0:35,0:35:90.23:0,90,1148	0/0:31,0:31:90.30:0,90,1243	0/0:36,0:34:96.27:0,96,1223	0/0:19,0:19:51.12:0,51,643	0/0:18,0:18:53.75:0,54,677	0/0:16,0:16:47.81:0,48,594	0/0:37,0:37:99:0,108,1368	0/0:19,0:19:48.04:0,48,587	0/0:11,0:11:33.04:0,33,423	0/0:29,0:29:84.22:0,84,1078	0/1:14,3:17:56.04:56,0,106	0/0:26,0:26:72.21:0,72,937	0/0:29,0:29:84.26:0,84,1078	0/0:3,0:3:8.94:0,9,101
chr10	105386358	.	TACACACACATACC	T	744.85	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=5.215;DP=1113;FS=6.993;HRun=0;HaplotypeScore=389.2695;InbreedingCoeff=0.6442;MQ=62.34;MQ0=7;MQRankSum=-5.209;QD=27.59;ReadPosRankSum=-0.729;VQSLOD=0.8303;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,120,6474	1/1:1,11:11:21.07:805,21,0	0/0:47,0:30:66.05:0,66,2223	0/0:48,0:38:65.92:0,66,2718	0/0:28,0:28:69.22:0,69,3927	0/0:37,0:36:93.32:0,93,5152	0/0:26,0:26:72.25:0,72,4167	0/0:49,0:49:99:0,123,5229	0/0:59,0:59:99:0,162,9095	0/0:74,0:74:99:0,199,11396	0/0:22,0:22:63.22:0,63,3633	0/0:45,0:45:99:0,114,6554	0/0:43,0:43:99:0,114,5681	0/0:38,0:38:99:0,108,6521	0/0:53,0:53:99:0,141,8087	0/0:45,0:45:99:0,111,6915	0/0:31,0:30:81.23:0,81,3980	0/1:15,0:15:44.53:45,0,1487	0/0:28,0:26:57.20:0,57,2758	0/0:36,0:36:84.29:0,84,4538	0/0:89,0:88:99:0,235,11954	0/0:31,0:31:68.91:0,69,4050	0/0:25,0:25:60.19:0,60,3165	0/0:54,0:54:99:0,117,6106	0/0:27,0:27:72.21:0,72,4112	0/0:52,0:52:99:0,148,7944	0/0:31,0:30:87.30:0,87,4664	0/0:16,0:16:45.15:0,45,2664
chr10	105386444	.	TACAC	T	498.62	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.435;DP=1254;FS=2.167;HRun=0;HaplotypeScore=223.8283;InbreedingCoeff=0.9995;MQ=61.45;MQ0=8;MQRankSum=-2.915;QD=31.16;ReadPosRankSum=0.215;VQSLOD=3.6957;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,159,3683	1/1:4,12:16:33.11:593,33,0	0/0:54,0:39:90.26:0,90,1777	0/0:67,0:47:85.44:0,85,1914	0/0:24,0:24:63.12:0,63,1524	0/0:43,0:42:99:0,108,2605	0/0:30,0:29:61.88:0,62,1342	0/0:54,0:54:99:0,137,2932	0/0:60,0:60:99:0,169,4108	0/0:75,0:75:99:0,208,5058	0/0:31,0:31:84.22:0,84,1990	0/0:53,0:53:99:0,151,3812	0/0:49,0:49:99:0,132,3332	0/0:45,0:45:99:0,132,3121	0/0:76,0:76:99:0,220,5467	0/0:58,0:58:99:0,159,4043	0/0:17,0:17:33.03:0,33,729	0/0:26,0:26:47.61:0,48,1748	0/0:30,0:27:66.14:0,66,1388	0/0:32,0:32:90.27:0,90,2200	0/0:86,0:86:99:0,235,5275	0/0:43,0:43:99:0,111,2741	0/0:37,0:37:99:0,102,2442	0/0:40,0:40:84.74:0,85,2337	0/0:29,0:29:62.54:0,63,1451	0/0:64,0:64:99:0,175,4459	0/0:29,0:29:78.11:0,78,1864	0/0:24,0:24:72.25:0,72,1799
chr10	105386501	.	T	TACAC	5768.19	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-5.984;DP=1280;FS=10.496;HRun=0;HaplotypeScore=231.6745;InbreedingCoeff=0.9931;MQ=58.49;MQ0=4;MQRankSum=-1.227;QD=48.47;ReadPosRankSum=1.416;VQSLOD=4.3206;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:52:99:0,107,2215	1/1:3,10:13:33.08:788,33,0	0/0:52,0:35:70.25:0,70,1276	0/0:50,0:41:85.46:0,85,1417	0/0:24,0:24:66.19:0,66,1152	1/1:1,36:37:72.25:1888,72,0	1/1:2,33:34:65.55:1729,66,0	0/0:60,0:59:99:0,119,2348	0/0:75,0:75:99:0,208,3622	0/0:74,0:74:99:0,201,3652	0/0:28,0:28:78.24:0,78,1373	0/0:49,0:49:99:0,135,2326	0/0:48,0:48:99:0,135,2347	0/0:44,0:44:99:0,120,2120	0/0:77,0:77:99:0,215,3779	0/0:56,0:56:99:0,159,2803	0/0:17,0:17:13.07:0,13,600	0/0:30,0:30:63.50:0,63,1276	0/0:30,0:29:81.22:0,81,1339	0/0:40,0:40:99:0,111,1846	0/0:93,0:93:99:0,243,4073	0/0:47,0:47:99:0,137,2336	0/0:43,0:43:99:0,123,2162	0/0:64,0:64:99:0,153,2663	1/1:5,27:33:54.18:1363,54,0	0/0:58,0:58:99:0,157,2746	0/0:24,0:24:58.52:0,59,1151	0/0:23,0:23:63.19:0,63,1081
chr10	105386643	.	TAC	T	757	PASS	AB=0.788;AC=4;AF=0.071;AN=56;BaseQRankSum=7.173;DP=1409;FS=0.000;HRun=0;HaplotypeScore=295.6586;InbreedingCoeff=-0.0771;MQ=55.99;MQ0=38;MQRankSum=-4.302;QD=6.64;ReadPosRankSum=-5.922;VQSLOD=1.7548;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,154,2699	0/1:14,4:17:89.81:90,0,223	0/0:92,0:17:30.10:0,30,434	0/0:120,0:27:20.65:0,21,527	0/0:31,0:30:78.27:0,78,1312	0/1:18,9:26:99:228,0,300	0/1:29,9:33:99:297,0,384	0/0:46,0:36:93.27:0,93,1550	0/0:76,0:76:99:0,214,3589	0/0:66,0:66:99:0,145,2982	0/0:20,0:20:54.18:0,54,935	0/0:58,0:58:99:0,148,2510	0/0:47,0:47:99:0,138,2340	0/0:49,0:49:99:0,138,2350	0/0:68,0:67:99:0,187,3147	0/0:54,0:53:99:0,154,2625	0/0:33,0:32:88.28:0,88,1478	0/0:26,0:24:54:0,54,1050	0/0:17,0:16:42.03:0,42,636	0/0:42,0:42:99:0,120,2039	0/0:130,0:124:99:0,300,5002	0/0:43,0:43:99:0,117,1921	0/0:24,0:24:66.19:0,66,1101	0/0:72,0:71:99:0,192,3263	0/1:22,9:28:99:252,0,367	0/0:56,0:56:99:0,160,2699	0/0:29,0:29:75.26:0,75,1263	0/0:31,0:30:79.59:0,80,1275
chr10	105386786	.	A	AAC	3718.04	PASS	AB=0.912;AC=9;AF=0.161;AN=56;BaseQRankSum=0.843;DP=1303;FS=0.380;HRun=0;HaplotypeScore=184.3864;InbreedingCoeff=0.8656;MQ=57.51;MQ0=27;MQRankSum=1.386;QD=23.83;ReadPosRankSum=-1.356;VQSLOD=3.5577;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,109,1923	1/1:11,11:22:22.92:609,23,0	0/0:80,0:25:21.84:0,22,315	0/0:88,1:24:25.91:0,26,327	0/0:28,0:28:78.26:0,78,1037	1/1:12,13:24:49.50:715,49,0	1/1:22,22:46:99:1529,109,0	0/0:62,0:60:99:0,159,2056	0/0:61,0:61:99:0,170,2132	0/0:62,0:62:99:0,162,2095	0/0:22,0:22:48.16:0,48,636	0/0:42,0:42:99:0,108,1437	0/0:54,0:54:99:0,132,1735	0/0:43,0:43:71.60:0,72,1481	0/0:57,0:57:99:0,153,2017	0/0:46,0:46:99:0,132,1741	0/0:33,1:34:29.01:0,29,990	0/1:28,3:29:42.70:43,0,825	0/0:16,0:14:33.09:0,33,406	0/0:26,0:26:72.24:0,72,956	0/0:113,3:109:99:0,248,3311	0/0:51,0:51:99:0,135,1765	0/0:33,0:32:93.27:0,93,1187	0/0:49,0:48:99:0,114,1480	1/1:18,13:27:61.93:822,62,0	0/0:56,0:56:99:0,153,2019	0/0:32,0:32:81.27:0,81,1077	0/0:20,0:20:57.19:0,57,757
chr10	105389291	.	CTGTG	C	81.56	PASS	AB=0.923;AC=6;AF=0.111;AN=54;BaseQRankSum=3.163;DP=370;FS=2.978;HRun=0;HaplotypeScore=72.3398;InbreedingCoeff=0.3509;MQ=60.05;MQ0=5;MQRankSum=-1.900;QD=2.55;ReadPosRankSum=-1.025;VQSLOD=1.3988;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:50.88:0,51,1031	0/1:8,0:7:13.51:14,0,60	./.	0/0:8,0:3:2.80:0,3,13	0/0:22,0:23:41.88:0,42,875	1/1:3,3:6:3:28,3,0	0/1:9,2:11:14.84:105,0,15	0/0:17,0:17:24.07:0,24,381	0/0:5,0:5:9.03:0,9,209	0/0:19,0:19:36.12:0,36,763	0/0:13,0:13:30.10:0,30,698	0/0:1,0:1:3.01:0,3,70	0/0:8,0:8:18.06:0,18,426	0/0:5,0:5:15.05:0,15,312	0/0:7,0:7:14.26:0,14,298	0/0:6,0:6:9.03:0,9,218	0/0:26,0:27:50.90:0,51,1123	0/0:31,0:32:63.01:0,63,1500	0/0:23,0:25:29.84:0,30,613	0/0:15,0:16:24.28:0,24,592	0/0:9,0:9:21.05:0,21,378	0/0:6,0:6:9.03:0,9,218	0/0:10,0:10:21.04:0,21,376	0/0:15,0:15:30.06:0,30,617	1/1:3,4:7:3.01:48,3,0	0/0:20,0:23:51.62:0,52,979	0/0:11,0:11:18.03:0,18,350	0/0:11,0:12:29.74:0,30,495
chr10	105389320	.	TGCGCGTGCGTGC	T	125.85	PASS	AC=2;AF=0.040;AN=50;BaseQRankSum=3.118;DP=340;FS=0.000;HRun=0;HaplotypeScore=119.6749;InbreedingCoeff=0.5127;MQ=53.91;MQ0=7;MQRankSum=-2.304;QD=13.98;ReadPosRankSum=0.604;VQSLOD=2.3997;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:57.19:0,57,2104	1/1:3,6:9:5.96:205,6,0	./.	./.	0/0:18,0:18:36.12:0,36,1401	./.	0/0:10,0:10:2.75:0,3,277	0/0:14,0:13:30.10:0,30,527	0/0:5,0:5:9.03:0,9,277	0/0:20,0:20:50.94:0,51,1517	0/0:14,0:14:36.11:0,36,1378	0/0:2,0:2:6.02:0,6,244	0/0:9,0:9:21.07:0,21,845	0/0:9,0:10:14.95:0,15,664	0/0:7,0:6:15.05:0,15,634	0/0:7,0:7:21.07:0,21,732	0/0:25,0:25:69.15:0,69,3167	0/0:28,0:27:72.37:0,72,2943	0/0:20,0:20:50.33:0,50,1591	0/0:14,0:14:24.95:0,25,664	0/0:9,0:8:15.05:0,15,865	0/0:7,0:7:15.05:0,15,499	0/0:11,0:11:27.05:0,27,1005	0/0:12,0:12:30.10:0,30,1183	0/0:10,0:10:2.94:0,3,54	0/0:19,0:19:42.14:0,42,1336	0/0:9,0:9:21.07:0,21,805	0/0:14,0:13:27.09:0,27,1245
chr10	105389326	.	T	TGC	112.38	PASS	AC=4;AF=0.080;AN=50;BaseQRankSum=3.128;DP=312;FS=0.000;HRun=0;HaplotypeScore=60.2564;InbreedingCoeff=0.7506;MQ=54.45;MQ0=6;MQRankSum=0.068;QD=5.11;ReadPosRankSum=0.158;VQSLOD=1.9733;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:62.22:0,62,826	0/0:8,0:8:5.68:0,6,28	./.	./.	0/0:15,0:15:36.12:0,36,500	./.	1/1:7,3:10:12.03:176,12,0	0/0:13,0:12:30.02:0,30,340	0/0:5,0:5:12.02:0,12,151	0/0:16,0:16:44.59:0,45,528	0/0:16,0:16:39.10:0,39,505	0/0:2,0:2:6.02:0,6,86	0/0:9,0:9:24.08:0,24,330	0/0:10,0:10:20.96:0,21,266	0/0:7,0:6:18.03:0,18,217	0/0:7,0:7:21.06:0,21,280	0/0:26,0:26:72.21:0,72,978	0/0:26,0:25:67.37:0,67,863	0/0:18,0:18:48.11:0,48,627	0/0:12,0:12:20.90:0,21,277	0/0:7,0:6:18.06:0,18,242	0/0:7,0:7:18.05:0,18,238	0/0:9,0:9:24.08:0,24,339	0/0:11,0:11:33.09:0,33,440	1/1:5,7:12:3.01:38,3,0	0/0:15,0:15:41.32:0,41,506	0/0:7,0:7:21.07:0,21,295	0/0:11,0:10:27.09:0,27,365
chr10	105390700	.	TTC	T	1176.78	PASS	AB=0.933;AC=9;AF=0.161;AN=56;BaseQRankSum=1.932;DP=461;FS=27.686;HRun=0;HaplotypeScore=62.6054;InbreedingCoeff=0.7679;MQ=68.26;MQ0=6;MQRankSum=-1.826;QD=17.31;ReadPosRankSum=-3.661;VQSLOD=1.1050;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:53.05:0,53,818	1/1:3,4:6:11.45:137,11,0	0/0:28,0:10:26.35:0,26,174	0/0:24,0:9:7.89:0,8,79	0/1:13,1:14:19.73:20,0,229	1/1:8,4:12:30.90:303,31,0	1/1:13,6:19:48.41:514,48,0	0/0:45,0:44:81.40:0,81,884	0/0:5,0:5:15:0,15,144	0/0:14,0:14:32.66:0,33,325	0/0:13,0:13:21.99:0,22,189	0/0:11,0:10:1.92:0,2,166	0/0:10,0:10:12.80:0,13,188	0/0:12,0:12:17.63:0,18,148	0/0:19,1:19:19.23:0,19,331	0/0:12,0:11:29.75:0,30,295	0/0:25,0:25:62.69:0,63,640	0/0:24,0:24:44.63:0,45,588	0/0:21,0:21:15.70:0,16,474	0/0:12,0:11:29.69:0,30,244	0/0:12,0:12:32.95:0,33,345	0/0:5,0:5:15.01:0,15,175	0/0:9,0:9:21.02:0,21,168	0/0:10,0:10:22.28:0,22,264	1/1:14,2:16:35.91:363,36,0	0/0:27,0:27:43.54:0,44,643	0/0:16,0:16:21.59:0,22,262	0/0:10,0:10:10.71:0,11,210
chr10	105393071	.	AG	A	800.20	PASS	AB=0.917;AC=15;AF=0.278;AN=54;BaseQRankSum=1.479;DP=490;FS=2.213;HRun=10;HaplotypeScore=62.4261;InbreedingCoeff=0.6531;MQ=63.30;MQ0=23;MQRankSum=2.614;QD=6.40;ReadPosRankSum=4.105;VQSLOD=1.1819;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:36:19:0,19,386	0/0:2,0:2:0.94:0,1,3	0/0:42,0:15:20.74:0,21,166	0/0:51,0:15:16.33:0,16,160	0/0:6,0:6:3.01:0,3,33	1/1:5,0:5:2.99:24,3,0	0/1:4,0:4:0:0,0,0	1/1:15,9:21:17.95:153,18,0	0/0:16,0:15:27.02:0,27,259	0/0:19,0:18:17.59:0,18,143	0/0:8,0:8:8.97:0,9,77	0/0:19,1:17:18.01:0,18,175	0/0:8,0:6:6.43:0,6,48	0/0:18,0:17:21.01:0,21,201	0/0:28,1:29:13.45:0,13,325	0/0:12,0:12:30.03:0,30,297	0/0:10,0:9:14.99:0,15,137	0/0:21,0:20:44.58:0,45,435	1/1:10,6:14:9.49:201,9,0	1/1:5,3:8:8.98:78,9,0	1/1:13,21:32:44.96:390,45,0	0/1:7,0:7:7.54:8,0,74	0/1:12,0:12:9.94:10,0,56	0/0:29,0:28:39.50:0,39,393	./.	0/0:17,0:17:24.40:0,24,197	1/1:6,7:12:11.96:104,12,0	0/0:14,0:13:27.45:0,27,250
chr10	105395033	.	A	AT	148.54	PASS	AB=0.941;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.945;DP=471;FS=6.067;HRun=9;HaplotypeScore=48.6066;InbreedingCoeff=0.6041;MQ=79.49;MQ0=0;MQRankSum=-1.817;QD=6.19;ReadPosRankSum=-1.291;VQSLOD=0.0723;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:35.98:0,36,312	1/1:1,7:8:21.06:232,21,0	0/0:11,0:11:23.96:0,24,202	0/0:14,0:13:17.92:0,18,200	0/0:19,0:20:53.02:0,53,448	0/0:26,0:26:65.97:0,66,573	0/0:15,0:15:35.99:0,36,313	0/0:24,0:24:41.91:0,42,359	0/0:12,0:12:32.98:0,33,286	0/0:21,0:21:50.93:0,51,436	0/0:21,0:21:56.89:0,57,485	0/0:15,0:15:32.99:0,33,286	0/0:19,0:19:44.98:0,45,390	0/0:17,0:17:50.99:0,51,443	0/0:14,0:14:35.99:0,36,313	0/0:17,0:17:47.97:0,48,413	0/0:29,0:29:77.98:0,78,677	0/0:15,0:15:38.99:0,39,338	0/0:12,0:12:26.99:0,27,234	0/0:10,0:10:29.99:0,30,260	0/0:14,0:14:38.99:0,39,338	0/0:19,0:19:44.25:0,44,362	0/0:17,0:17:41.94:0,42,358	0/0:18,0:18:44.98:0,45,391	0/1:15,1:16:20.12:20,0,247	0/0:24,0:24:7.35:0,7,387	0/0:16,0:16:44.95:0,45,382	0/0:11,0:11:23.98:0,24,208
chr10	105405224	.	CGTGT	C	688.83	PASS	AB=0.876;AC=9;AF=0.161;AN=56;BaseQRankSum=5.025;DP=814;FS=8.299;HRun=0;HaplotypeScore=153.0036;InbreedingCoeff=0.6059;MQ=56.90;MQ0=17;MQRankSum=-0.649;QD=5.47;ReadPosRankSum=0.561;VQSLOD=2.2752;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:48:71.50:0,72,1472	0/1:7,1:11:47.04:70,0,47	0/0:47,0:22:5.04:0,5,46	0/0:50,0:24:15.03:0,15,180	0/0:25,0:26:62.65:0,63,1160	1/1:6,8:14:15.05:230,15,0	1/1:17,8:25:21.06:308,21,0	0/0:36,0:36:45.62:0,46,899	0/0:29,0:29:15.19:0,15,889	0/1:31,0:32:7.33:7,0,637	0/0:17,0:15:23.82:0,24,453	0/0:23,0:24:39.79:0,40,679	0/0:22,0:22:27.83:0,28,757	0/0:30,0:31:41.26:0,41,678	0/0:25,1:26:44.72:0,45,877	0/0:18,0:19:44.87:0,45,875	0/0:38,0:35:63.15:0,63,1359	0/0:25,0:26:53.92:0,54,1179	0/0:13,0:13:15.04:0,15,318	0/0:23,1:25:35.86:0,36,749	0/0:79,0:81:99:0,137,2785	0/0:20,0:21:35.86:0,36,780	0/1:23,1:25:1:1,0,719	0/0:38,0:41:81.29:0,81,1611	1/1:13,5:19:15.04:219,15,0	0/0:37,0:36:54.12:0,54,903	0/0:22,0:22:26.97:0,27,430	0/0:6,0:6:9.03:0,9,218
chr10	105405266	.	GCA	G	53.02	PASS	AB=0.944;AC=5;AF=0.089;AN=56;BaseQRankSum=6.150;DP=739;FS=14.808;HRun=0;HaplotypeScore=105.1455;InbreedingCoeff=0.2756;MQ=49.64;MQ0=41;MQRankSum=-3.182;QD=0.25;ReadPosRankSum=-4.677;VQSLOD=-0.3568;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:81.17:0,81,1523	1/1:5,0:5:6.82:49,7,0	0/1:87,4:8:51.69:52,0,255	0/1:103,4:11:57.73:58,0,183	0/0:21,0:21:52.55:0,53,1187	0/1:9,1:10:3.47:3,0,71	0/0:13,0:12:12.69:0,13,238	0/0:29,0:29:84.25:0,84,1579	0/0:20,1:21:22.29:0,22,989	0/0:20,0:20:30.61:0,31,1054	0/0:10,0:10:23.95:0,24,472	0/0:12,0:12:33.11:0,33,616	0/0:22,0:22:60:0,60,1131	0/0:18,0:16:35.41:0,35,722	0/0:19,0:19:50.97:0,51,945	0/0:18,0:18:50.75:0,51,972	0/0:32,2:33:93.05:0,93,1727	0/0:24,0:23:41.16:0,41,1137	0/0:18,0:16:45.13:0,45,813	0/0:22,0:22:60.10:0,60,1184	0/0:81,1:81:99:0,160,3275	0/0:18,0:17:27.16:0,27,822	0/0:16,0:16:10.58:0,11,874	0/0:39,0:39:49.87:0,50,1584	0/0:7,1:8:9.01:0,9,111	0/0:15,0:15:36.86:0,37,790	0/0:11,0:11:30.10:0,30,555	0/0:3,0:3:9.03:0,9,162
chr10	105405273	.	TTC	T	396.95	PASS	AB=0.895;AC=10;AF=0.179;AN=56;BaseQRankSum=6.987;DP=718;FS=6.133;HRun=0;HaplotypeScore=101.6249;InbreedingCoeff=0.6713;MQ=51.89;MQ0=27;MQRankSum=-4.444;QD=1.82;ReadPosRankSum=-3.733;VQSLOD=0.5447;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:53.56:0,54,1398	1/1:1,1:4:5.35:79,5,0	0/1:74,10:11:53.02:53,0,214	0/1:86,12:12:99:116,0,127	0/0:20,0:20:56.61:0,57,1069	1/1:5,2:10:6.37:55,6,0	1/1:6,0:8:9.89:84,10,0	0/0:27,0:27:77.63:0,78,1369	0/0:23,0:23:61.66:0,62,1097	0/0:24,0:24:72.16:0,72,1196	0/0:12,0:12:29.44:0,29,520	0/0:12,0:12:33.11:0,33,557	0/0:21,0:21:56.10:0,56,964	0/0:15,0:14:40.37:0,40,746	0/0:15,1:16:41.88:0,42,721	0/0:17,0:17:47.95:0,48,868	0/0:36,2:36:99:0,102,1813	0/0:24,0:23:69.21:0,69,1226	0/0:15,0:14:39.98:0,40,673	0/0:22,0:22:63.17:0,63,1121	0/0:80,1:80:99:0,158,3021	0/0:15,0:14:39.10:0,39,680	0/0:19,0:19:57.18:0,57,1003	0/0:34,1:34:75.18:0,75,1444	1/1:2,3:7:15.03:163,15,0	0/0:15,0:15:38.45:0,38,651	0/0:10,0:10:29.31:0,29,504	0/0:4,0:4:12.04:0,12,242
chr10	105405357	.	G	GGT	453.54	PASS	AB=0.891;AC=9;AF=0.173;AN=52;BaseQRankSum=-1.594;DP=774;FS=13.258;HRun=0;HaplotypeScore=118.5332;InbreedingCoeff=0.2823;MQ=44.01;MQ0=92;MQRankSum=-0.539;QD=2.26;ReadPosRankSum=-0.449;VQSLOD=1.3818;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:37:43.54:0,44,395	0/0:4,0:7:2.84:0,3,14	./.	./.	0/0:20,0:19:12:0,12,119	0/0:10,0:11:5.68:0,6,28	0/0:17,0:23:2.84:0,3,14	1/1:32,0:22:5.99:59,6,0	0/0:26,0:24:8.66:0,9,97	0/0:34,0:28:17.61:0,18,157	0/0:13,0:13:6:0,6,57	0/0:16,0:15:17.88:0,18,176	0/0:20,0:15:9.01:0,9,89	0/0:25,0:24:11.45:0,11,111	0/0:18,0:18:12.75:0,13,113	0/0:7,0:7:5.84:0,6,55	0/1:34,0:35:7.88:8,0,194	0/0:34,0:31:17.44:0,17,157	1/1:16,2:14:3.01:44,3,0	1/1:15,5:20:3.97:201,4,0	0/1:65,6:67:49.35:110,0,49	0/0:16,0:19:12.02:0,12,125	0/0:16,0:16:8.84:0,9,69	0/0:34,0:32:17.52:0,18,163	0/0:12,0:10:2.84:0,3,14	0/0:18,0:14:17.20:0,17,158	0/1:10,3:13:17.34:159,0,17	0/0:12,0:11:9.02:0,9,97
chr10	105405466	.	T	TCAGACTTAG	926.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.011;DP=647;FS=2.623;HRun=0;HaplotypeScore=178.6121;InbreedingCoeff=0.8963;MQ=70.07;MQ0=1;MQRankSum=-3.359;QD=102.96;ReadPosRankSum=0.032;VQSLOD=3.8884;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,99,2790	1/1:1,7:9:24.08:1020,24,0	0/0:25,0:22:5.72:0,6,660	0/0:18,0:17:29.10:0,29,662	0/0:18,0:18:54.14:0,54,1312	0/0:20,0:20:28.30:0,28,1400	0/0:23,0:23:57.15:0,57,1582	0/0:32,0:32:69.23:0,69,1884	0/0:24,0:24:66.21:0,66,1789	0/0:38,0:38:99:0,99,2713	0/0:20,0:20:48.16:0,48,1381	0/0:21,0:21:63.22:0,63,1707	0/0:20,0:20:51.18:0,51,1475	0/0:27,0:27:69.20:0,69,1806	0/0:26,0:26:75.26:0,75,2118	0/0:17,0:17:51.16:0,51,1413	0/0:25,0:25:57.20:0,57,1607	0/0:20,0:19:54.11:0,54,1430	0/0:16,0:16:36.12:0,36,989	0/0:23,0:23:69.22:0,69,1932	0/0:24,0:24:60.19:0,60,1598	0/0:32,0:32:90.30:0,90,2514	0/0:16,0:16:45.15:0,45,1302	0/0:31,0:31:72.20:0,72,2000	0/0:20,0:20:60.18:0,60,1575	0/0:23,0:23:57.19:0,57,1541	0/0:28,0:28:63.17:0,63,1672	0/0:10,0:10:27.09:0,27,780
chr10	105407203	.	ACTGTAG	A	3733.14	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.480;DP=615;FS=6.068;HRun=0;HaplotypeScore=128.0375;InbreedingCoeff=0.9994;MQ=87.37;MQ0=0;MQRankSum=-11.515;QD=63.27;ReadPosRankSum=0.437;VQSLOD=4.1088;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,5061	0/0:10,0:10:27.09:0,27,973	0/0:26,0:26:70.96:0,71,2260	0/0:20,0:20:54.19:0,54,1772	0/0:19,0:19:54.18:0,54,1802	1/1:0,14:14:42.14:996,42,0	1/1:2,24:26:63.22:1512,63,0	0/0:31,0:31:90.30:0,90,3012	0/0:24,0:24:69.24:0,69,2472	0/0:18,0:18:54.19:0,54,1935	0/0:12,0:12:36.12:0,36,1179	0/0:19,0:19:57.20:0,57,1909	0/0:14,0:14:42.14:0,42,1514	0/0:20,0:20:57.20:0,57,2021	0/0:14,0:14:39.13:0,39,1406	0/0:20,0:20:56.78:0,57,1908	0/0:34,0:34:96.33:0,96,3335	0/0:18,0:18:48.14:0,48,1598	0/0:25,0:25:75.26:0,75,2504	0/0:19,0:19:51.18:0,51,1734	0/0:48,0:48:99:0,141,4923	0/0:12,0:12:36.12:0,36,1240	0/0:13,0:13:36.12:0,36,1202	0/0:41,0:41:99:0,117,4000	1/1:0,19:19:51.18:1225,51,0	0/0:20,0:20:60.21:0,60,2164	0/0:20,0:20:60.21:0,60,2097	0/0:11,0:11:33.11:0,33,1167
chr10	105407816	.	G	GA	775.43	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.655;DP=543;FS=5.035;HRun=8;HaplotypeScore=59.5379;InbreedingCoeff=0.9971;MQ=72.58;MQ0=0;MQRankSum=-2.584;QD=10.62;ReadPosRankSum=1.454;VQSLOD=1.9501;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:84.01:0,84,761	1/1:1,8:9:24.07:277,24,0	0/0:10,0:10:23.75:0,24,202	0/0:8,0:8:20.03:0,20,164	0/0:17,0:17:42.02:0,42,384	1/1:21,0:21:51.13:252,51,0	1/1:16,0:16:36.93:182,37,0	0/0:33,0:33:84.02:0,84,765	0/0:21,0:21:54.03:0,54,494	0/0:18,0:18:45.01:0,45,412	0/0:21,0:21:60:0,60,541	0/0:11,0:11:30.02:0,30,275	0/0:22,0:22:60.02:0,60,549	0/0:15,0:15:45.02:0,45,412	0/0:24,0:24:54.01:0,54,494	0/0:12,0:12:36.01:0,36,325	0/0:27,0:27:71.96:0,72,645	0/0:20,0:20:54.02:0,54,494	0/0:21,0:21:44.99:0,45,408	0/0:20,0:20:57.02:0,57,518	0/0:19,0:19:48.02:0,48,439	0/0:15,0:15:42.02:0,42,384	0/0:21,0:21:57.01:0,57,516	0/0:19,0:19:51.03:0,51,467	1/1:27,0:26:45.49:225,45,0	0/0:29,0:29:75.03:0,75,683	0/0:18,0:18:51.03:0,51,467	0/0:16,0:16:48.03:0,48,439
chr10	105407824	.	A	AAAC	3010.41	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-5.347;DP=563;FS=1.184;HRun=0;HaplotypeScore=75.0770;InbreedingCoeff=0.9969;MQ=73.81;MQ0=0;MQRankSum=-2.270;QD=44.27;ReadPosRankSum=2.306;VQSLOD=5.1819;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.24:0,96,1476	0/0:9,0:9:21.96:0,22,89	0/0:12,0:12:29.27:0,29,470	0/0:8,0:8:20.51:0,21,305	0/0:18,0:18:48.14:0,48,748	1/1:0,18:20:54.19:1235,54,0	1/1:0,14:19:39.13:887,39,0	0/0:35,0:35:99:0,102,1533	0/0:20,0:20:60.18:0,60,947	0/0:16,0:16:48.16:0,48,772	0/0:20,0:20:60.21:0,60,995	0/0:12,0:12:36.09:0,36,542	0/0:22,0:22:66.18:0,66,1032	0/0:16,0:16:48.15:0,48,751	0/0:22,0:22:63.18:0,63,969	0/0:16,0:16:48.12:0,48,692	0/0:28,0:28:84.24:0,84,1295	0/0:23,0:23:63.16:0,63,967	0/0:21,0:21:60.14:0,60,874	0/0:26,0:26:72.17:0,72,1050	0/0:18,0:18:54.15:0,54,840	0/0:16,0:16:48.13:0,48,740	0/0:21,0:21:63.18:0,63,989	0/0:19,0:19:57.15:0,57,892	1/1:0,24:28:48.15:1032,48,0	0/0:28,0:28:81.26:0,81,1298	0/0:18,0:18:54.18:0,54,862	0/0:17,0:17:51.16:0,51,822
chr10	105408354	.	AT	A	1687.55	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.127;DP=670;FS=1.883;HRun=2;HaplotypeScore=65.6204;InbreedingCoeff=0.9984;MQ=89.14;MQ0=0;MQRankSum=-2.573;QD=28.13;ReadPosRankSum=-1.458;VQSLOD=2.9438;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,1929	0/0:15,0:15:36.06:0,36,539	0/0:23,0:23:66.20:0,66,904	0/0:27,0:27:75.15:0,75,988	0/0:23,0:23:69.23:0,69,1032	1/1:1,19:20:42.14:545,42,0	1/1:0,27:27:66.21:857,66,0	0/0:28,0:28:84.28:0,84,1254	0/0:21,0:21:63.21:0,63,944	0/0:16,0:16:48.16:0,48,714	0/0:27,0:27:81.27:0,81,1214	0/0:17,0:17:51.16:0,51,744	0/0:13,0:13:39.13:0,39,585	0/0:16,0:16:48.15:0,48,698	0/0:28,0:28:84.27:0,84,1239	0/0:26,0:26:78.26:0,78,1168	0/0:34,0:34:99:0,99,1484	0/0:20,0:20:57.19:0,57,854	0/0:25,0:25:63.20:0,63,917	0/0:25,0:25:69.21:0,69,994	0/0:35,0:35:99:0,102,1497	0/0:28,0:28:84.28:0,84,1258	0/0:19,0:19:57.19:0,57,854	0/0:28,0:28:84.28:0,84,1258	1/1:0,13:13:33.11:428,33,0	0/0:36,0:36:99:0,99,1470	0/0:29,0:29:87.29:0,87,1304	0/0:7,0:7:21.07:0,21,299
chr10	105408561	.	TCC	T	1662.10	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.452;DP=471;FS=0.539;HRun=10;HaplotypeScore=72.2494;InbreedingCoeff=0.9479;MQ=71.24;MQ0=0;MQRankSum=-6.082;QD=23.74;ReadPosRankSum=5.109;VQSLOD=3.1558;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:53.63:0,54,748	1/1:2,6:8:18.04:201,18,0	0/0:15,0:12:17.58:0,18,212	0/0:18,0:16:11.16:0,11,139	0/0:9,0:9:24.05:0,24,335	1/1:0,17:17:45.12:501,45,0	1/1:8,21:29:63.16:699,63,0	0/0:21,0:22:42.09:0,42,555	0/0:22,0:22:64.08:0,64,952	0/0:8,0:8:6.02:0,6,95	0/0:12,0:12:24.07:0,24,352	0/0:10,0:10:24.07:0,24,355	0/0:8,0:8:24.02:0,24,311	0/0:12,0:12:27.09:0,27,416	0/0:16,0:17:32.60:0,33,469	0/0:15,0:15:42.14:0,42,659	0/0:30,0:30:75.21:0,75,1131	0/0:25,0:26:69.18:0,69,999	0/0:9,0:10:20.54:0,21,269	0/0:8,0:8:17.37:0,17,191	0/0:29,0:31:71.05:0,71,924	0/0:13,0:14:30.08:0,30,419	0/0:9,0:9:24.08:0,24,376	0/0:30,0:30:75.24:0,75,1160	1/1:1,15:16:39.06:420,39,0	0/0:17,0:19:41.10:0,41,563	0/0:17,0:17:42.13:0,42,639	0/0:11,0:11:18.04:0,18,259
chr10	105408629	.	C	CTCGAGTCTCGAG	6309.79	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.324;DP=606;FS=2.003;HRun=0;HaplotypeScore=215.5401;InbreedingCoeff=0.9783;MQ=76.36;MQ0=0;MQRankSum=-9.533;QD=80.89;ReadPosRankSum=-1.651;VQSLOD=4.3489;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,117,3968	0/0:12,0:12:33.11:0,33,975	0/0:16,0:16:48:0,48,1081	0/0:14,0:14:36.06:0,36,781	0/0:13,0:13:33.08:0,33,1009	1/1:17,6:23:36.11:1842,36,0	1/1:31,13:44:81.23:4030,81,0	0/0:22,0:22:60.21:0,60,1976	0/0:20,0:20:60.21:0,60,2181	0/0:19,0:19:51.18:0,51,1713	0/0:17,0:17:45.15:0,45,1453	0/0:23,0:23:69.24:0,69,2549	0/0:11,0:11:33.11:0,33,1052	0/0:23,0:22:63.22:0,63,2080	0/0:18,0:18:54.19:0,54,1824	0/0:20,0:20:60.21:0,60,2059	0/0:49,0:49:99:0,147,4932	0/0:30,0:30:84.27:0,84,2917	0/0:15,0:15:42.14:0,42,1445	0/0:11,0:11:33.11:0,33,1096	0/0:28,0:28:84.29:0,84,2899	0/0:22,0:22:66.18:0,66,2310	0/0:11,0:11:33.11:0,33,1188	0/0:35,0:35:99:0,105,3634	1/1:9,2:11:9.03:439,9,0	0/0:25,0:25:72.24:0,72,2572	0/0:19,0:19:51.18:0,51,1777	0/0:12,0:12:36.12:0,36,1369
chr10	105409022	.	G	GT	266	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.767;DP=596;FS=5.419;HRun=1;HaplotypeScore=59.8896;InbreedingCoeff=0.9666;MQ=80.85;MQ0=0;MQRankSum=-1.609;QD=29.56;ReadPosRankSum=0.433;VQSLOD=3.1411;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,1638	1/1:0,9:9:24.08:359,24,0	0/0:17,0:17:48.14:0,48,601	0/0:17,0:17:45.08:0,45,556	0/0:14,0:14:39.13:0,39,506	0/0:15,0:15:39.13:0,39,500	0/0:10,0:10:27.09:0,27,347	0/0:27,0:27:72.23:0,72,934	0/0:24,0:24:66.21:0,66,857	0/0:29,0:29:84.26:0,84,1068	0/0:17,0:17:51.17:0,51,661	0/0:24,0:24:72.23:0,72,932	0/0:24,0:24:72.21:0,72,906	0/0:18,0:18:54.16:0,54,687	0/0:19,0:19:57.16:0,57,724	0/0:21,0:21:63.15:0,63,773	0/0:33,0:33:99:0,99,1285	0/0:37,0:37:99:0,108,1381	0/0:11,0:11:30.10:0,30,390	0/0:19,0:19:54.17:0,54,698	0/0:34,0:34:90.29:0,90,1166	0/0:18,0:18:54.18:0,54,700	0/0:12,0:12:36.12:0,36,467	0/0:27,0:27:81.23:0,81,1019	0/0:15,0:15:42.11:0,42,523	0/0:26,0:26:69.22:0,69,884	0/0:29,0:29:87.20:0,87,1065	0/0:6,0:6:12.04:0,12,156
chr10	105409123	.	AT	A	1566.46	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.932;DP=603;FS=28.078;HRun=2;HaplotypeScore=70.9801;InbreedingCoeff=0.9898;MQ=75.50;MQ0=2;MQRankSum=-6.427;QD=30.12;ReadPosRankSum=1.316;VQSLOD=1.8390;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:56:99:0,171,2455	0/0:6,0:6:15.05:0,15,209	0/0:11,0:11:22.63:0,23,319	0/0:13,0:13:30.10:0,30,418	0/0:16,0:16:48.15:0,48,700	1/1:0,12:12:27.09:350,27,0	1/1:2,19:20:54.18:699,54,0	0/0:20,0:20:60.20:0,60,899	0/0:26,0:26:78.22:0,78,1144	0/0:30,0:30:87.28:0,87,1264	0/0:11,0:11:33.11:0,33,495	0/0:30,0:30:87.29:0,87,1304	0/0:20,0:20:60.19:0,60,872	0/0:21,0:21:63.20:0,63,924	0/0:14,0:14:42.13:0,42,612	0/0:15,0:15:45.14:0,45,656	0/0:32,0:32:96.30:0,96,1415	0/0:29,0:29:84.28:0,84,1259	0/0:22,0:22:63.21:0,63,944	0/0:13,0:13:36.09:0,36,515	0/0:46,0:46:99:0,135,1983	0/0:21,0:21:63.20:0,63,911	0/0:17,0:16:48.15:0,48,700	0/0:31,0:31:93.31:0,93,1390	1/1:0,19:19:51.17:660,51,0	0/0:29,0:29:84.28:0,84,1242	0/0:15,0:15:45.14:0,45,656	0/0:6,0:6:18.06:0,18,270
chr10	105410059	.	CTG	C	503.91	PASS	AB=0.930;AC=17;AF=0.340;AN=50;BaseQRankSum=3.251;DP=674;FS=0.638;HRun=0;HaplotypeScore=91.5754;InbreedingCoeff=-0.0834;MQ=60.96;MQ0=18;MQRankSum=3.260;QD=1.58;ReadPosRankSum=0.121;VQSLOD=1.6953;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,7:50:26.24:0,26,632	1/1:4,0:9:8.52:42,9,0	./.	./.	0/1:13,0:15:27.66:28,0,143	0/0:17,0:16:2.97:0,3,20	0/0:27,0:27:12.36:0,12,92	0/0:18,0:16:11.95:0,12,112	0/1:23,3:27:70.54:71,0,239	1/1:17,2:20:23.62:192,24,0	1/1:8,8:16:3.01:33,3,0	0/1:18,0:18:18.24:18,0,164	0/0:14,0:15:10.16:0,10,183	0/1:13,1:15:20.68:21,0,216	0/0:22,0:22:25.85:0,26,319	0/1:16,1:17:22.67:23,0,175	0/1:34,0:33:43.85:44,0,492	0/1:18,4:23:36.97:37,0,321	0/0:16,0:14:5.26:0,5,89	0/0:19,0:19:8.94:0,9,115	0/0:39,0:37:37.62:0,38,646	0/0:31,0:31:34.04:0,34,556	0/1:18,3:21:18.21:18,0,136	0/1:33,0:33:17.49:17,0,409	./.	0/1:31,1:31:40.92:41,0,280	0/1:35,2:37:76.85:77,0,388	0/0:23,0:22:42.01:0,42,519
chr10	105410186	.	GGT	G	326.19	PASS	AB=0.922;AC=21;AF=0.438;AN=48;BaseQRankSum=4.382;DP=570;FS=0.000;HRun=0;HaplotypeScore=81.7392;InbreedingCoeff=-0.1972;MQ=62.50;MQ0=14;MQRankSum=0.593;QD=0.85;ReadPosRankSum=-0.194;VQSLOD=1.3249;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,3:26:20.37:20,0,119	0/0:5,0:5:3:0,3,25	./.	./.	0/0:11,0:10:2.99:0,3,24	1/1:14,0:19:5.04:26,5,0	1/1:15,0:20:11.36:56,11,0	./.	0/0:19,0:20:15.03:0,15,198	0/1:23,0:23:46.05:46,0,52	0/1:10,1:10:20.38:20,0,103	0/0:15,0:13:2.94:0,3,18	0/1:9,0:9:18.17:18,0,38	0/0:14,0:14:6.02:0,6,87	0/1:21,3:24:2.32:2,0,346	0/1:8,5:13:37.02:83,0,37	0/1:21,1:21:14.32:14,0,193	0/1:16,2:18:64.17:64,0,266	./.	1/1:9,3:12:3.01:32,3,0	0/1:51,4:55:5.35:5,0,307	0/1:14,1:15:23.37:23,0,79	0/0:13,0:12:9.02:0,9,116	0/1:44,7:51:1.66:2,0,729	1/1:12,0:18:5.68:28,6,0	0/1:21,1:22:17.38:17,0,136	0/1:27,0:27:10.45:10,0,225	0/0:18,0:17:18.03:0,18,218
chr10	105410191	.	G	GTGTGTGTA	69.11	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=3.204;DP=655;FS=1.597;HRun=0;HaplotypeScore=186.6826;InbreedingCoeff=0.2625;MQ=57.70;MQ0=17;MQRankSum=-4.154;QD=1.26;ReadPosRankSum=-0.758;VQSLOD=2.4608;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:51.40:0,51,604	1/1:1,6:9:2.79:129,3,0	0/0:17,0:11:24.75:0,25,202	0/0:31,0:15:39.02:0,39,392	0/0:15,0:14:26.94:0,27,237	0/0:26,0:26:29.85:0,30,322	0/1:22,0:22:24.05:24,0,352	0/0:19,0:18:34.69:0,35,316	0/0:21,0:21:47.73:0,48,578	0/0:24,0:24:61.84:0,62,559	0/0:12,0:11:17.97:0,18,299	0/0:17,0:15:32.96:0,33,326	0/0:12,0:12:23.95:0,24,248	0/0:14,0:14:35.96:0,36,406	0/0:26,0:26:45:0,45,839	0/0:14,0:14:0.86:0,1,351	0/0:30,0:29:61.04:0,61,761	0/1:24,0:24:17.29:17,0,764	0/0:19,0:18:39.59:0,40,320	0/0:15,0:15:23.66:0,24,234	0/0:69,0:67:99:0,137,1524	0/0:20,0:20:38.65:0,39,414	0/0:14,0:13:19.72:0,20,264	0/0:59,0:59:99:0,135,2163	0/0:22,0:22:20.56:0,21,245	0/0:28,0:28:65.28:0,65,719	0/0:27,0:27:59.59:0,60,828	0/0:20,0:18:47.89:0,48,470
chr10	105410577	.	G	GGTTCCTCCC	6064.48	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-2.383;DP=625;FS=0.556;HRun=0;HaplotypeScore=172.8264;InbreedingCoeff=0.9921;MQ=75.74;MQ0=0;MQRankSum=-10.687;QD=93.30;ReadPosRankSum=-1.078;VQSLOD=4.8575;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:93.27:0,93,2422	0/0:8,0:8:24.08:0,24,635	0/0:18,0:18:48.16:0,48,1231	0/0:12,0:12:30.01:0,30,652	0/0:18,0:18:48.15:0,48,1307	1/1:9,6:15:36.12:1399,36,0	1/1:13,22:37:87.30:3905,87,0	0/0:34,0:34:78.24:0,78,2097	0/0:28,0:28:84.29:0,84,2335	0/0:25,0:25:63.01:0,63,1763	0/0:8,0:8:18.06:0,18,483	0/0:29,0:29:81.28:0,81,2261	0/0:20,0:20:57.20:0,57,1634	0/0:27,0:27:72.23:0,72,1981	0/0:16,0:16:42.12:0,42,1171	0/0:9,0:9:27.09:0,27,795	0/0:40,0:40:99:0,99,2544	0/0:26,0:26:66.20:0,66,1739	0/0:25,0:24:55.22:0,55,1556	0/0:13,0:13:39.13:0,39,1108	0/0:53,0:53:99:0,144,4133	0/0:18,0:18:48.16:0,48,1365	0/0:8,0:8:24.08:0,24,698	0/0:28,0:28:66.11:0,66,1644	1/1:10,3:13:18.06:760,18,0	0/0:26,0:26:75.25:0,75,2140	0/0:12,0:12:36.12:0,36,985	0/0:23,0:23:54.19:0,54,1399
chr10	105410667	.	C	CTT	1653.51	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.094;DP=584;FS=0.578;HRun=10;HaplotypeScore=77.7090;InbreedingCoeff=0.9714;MQ=75.37;MQ0=0;MQRankSum=-0.009;QD=28.03;ReadPosRankSum=-1.938;VQSLOD=3.4584;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:41:99:0,105,1028	0/0:6,0:6:11.89:0,12,121	0/0:18,0:17:22.05:0,22,165	0/0:21,0:17:16.20:0,16,221	0/0:36,0:36:71.66:0,72,890	1/1:2,12:16:33.11:491,33,0	1/1:1,18:21:48.16:715,48,0	0/0:23,0:23:56.82:0,57,556	0/0:19,0:19:42.05:0,42,427	0/0:19,0:19:48.05:0,48,479	0/0:14,0:17:29.22:0,29,320	0/0:12,0:12:27.03:0,27,274	0/0:24,0:24:60.08:0,60,610	0/0:18,0:18:45.04:0,45,451	0/0:21,0:21:60.11:0,60,610	0/0:18,0:18:45.09:0,45,458	0/0:39,0:39:93.11:0,93,945	0/0:25,0:25:53.99:0,54,548	0/0:16,0:17:29.76:0,30,357	0/0:20,0:20:47.90:0,48,464	0/0:10,0:10:27.04:0,27,275	0/0:15,0:15:45.10:0,45,455	0/0:15,0:15:41.95:0,42,405	0/0:32,0:32:84.10:0,84,848	1/1:1,19:22:41.63:591,42,0	0/0:36,0:36:87.09:0,87,878	0/0:15,0:16:41.82:0,42,409	0/0:6,0:6:12:0,12,122
chr10	105410819	.	C	CTGTG	2252.04	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.765;DP=986;FS=4.505;HRun=0;HaplotypeScore=181.3711;InbreedingCoeff=0.9804;MQ=66.29;MQ0=9;MQRankSum=-4.052;QD=30.43;ReadPosRankSum=1.351;VQSLOD=3.0226;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:81.19:0,81,1505	0/0:15,0:15:36.12:0,36,606	0/0:52,0:22:10.14:0,10,368	0/0:66,0:26:17.57:0,18,189	0/0:29,0:29:75.24:0,75,1285	1/1:11,9:21:42.10:872,42,0	1/1:15,11:28:40.90:813,41,0	0/0:56,0:55:99:0,132,2022	0/0:43,0:42:99:0,111,1827	0/0:46,0:46:99:0,117,1993	0/0:25,0:25:63.20:0,63,1068	0/0:31,0:31:75.24:0,75,1239	0/0:33,0:33:90.27:0,90,1460	0/0:25,0:25:56.29:0,56,1041	0/0:52,0:52:99:0,144,2300	0/0:29,0:28:87.19:0,87,1378	0/0:40,0:40:92.33:0,92,1629	0/0:23,0:23:59.41:0,59,1041	0/0:21,0:21:48.07:0,48,692	0/0:23,0:23:57.17:0,57,948	0/0:75,0:75:99:0,171,2774	0/0:32,0:32:78.20:0,78,1253	0/0:27,0:27:78.12:0,78,1218	0/0:30,0:30:84.25:0,84,1388	1/1:14,11:25:32.35:709,32,0	0/0:49,0:49:99:0,106,1745	0/0:25,0:24:48.04:0,48,769	0/0:21,0:21:57.19:0,57,967
chr10	105410865	.	A	ATG	1275.91	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.613;DP=1049;FS=1.405;HRun=0;HaplotypeScore=154.3189;InbreedingCoeff=0.9919;MQ=56.12;MQ0=26;MQRankSum=-0.066;QD=19.94;ReadPosRankSum=-1.200;VQSLOD=3.8426;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:89.69:0,90,1216	0/0:13,0:13:30.10:0,30,381	0/0:48,0:12:30.08:0,30,358	0/0:53,0:23:31.47:0,31,300	0/0:28,0:28:75.22:0,75,939	1/1:10,8:18:20.99:337,21,0	1/1:9,21:30:54.06:828,54,0	0/0:46,0:44:88.99:0,89,1110	0/0:46,0:46:99:0,117,1474	0/0:53,0:52:99:0,131,1589	0/0:21,0:21:60.17:0,60,747	0/0:41,0:41:99:0,120,1509	0/0:34,0:34:90.22:0,90,1085	0/0:24,0:24:48.34:0,48,642	0/0:63,0:63:99:0,172,2147	0/0:37,0:36:96.31:0,96,1221	0/0:48,0:48:95.01:0,95,1368	0/0:37,0:37:96.31:0,96,1221	0/0:31,0:25:54.93:0,55,618	0/0:28,0:28:66.18:0,66,811	0/0:92,0:91:99:0,219,2705	0/0:33,0:33:81.25:0,81,1016	0/0:26,0:26:62.76:0,63,743	0/0:50,0:50:99:0,127,1585	1/1:8,8:16:14.73:251,15,0	0/0:41,0:41:99:0,105,1336	0/0:29,0:29:72.20:0,72,899	0/0:18,0:18:54.17:0,54,687
chr10	105410941	.	G	GTC	2933.59	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.256;DP=1200;FS=2.299;HRun=0;HaplotypeScore=176.6070;InbreedingCoeff=0.9968;MQ=56.13;MQ0=16;MQRankSum=-1.078;QD=37.61;ReadPosRankSum=0.397;VQSLOD=4.0905;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:69,0:69:99:0,180,2625	0/0:11,0:11:33.09:0,33,482	0/0:17,0:6:17.85:0,18,171	0/0:43,0:20:54.11:0,54,706	0/0:27,0:27:78.26:0,78,1192	1/1:3,17:20:51.16:949,51,0	1/1:13,25:37:84.22:1531,84,0	0/0:65,0:63:99:0,156,2280	0/0:73,0:72:99:0,190,2813	0/0:60,0:58:99:0,158,2153	0/0:22,0:22:63.17:0,63,919	0/0:45,0:45:99:0,126,1771	0/0:38,0:38:99:0,111,1626	0/0:43,0:43:99:0,123,1797	0/0:70,0:70:99:0,205,2894	0/0:46,0:46:99:0,132,1841	0/0:48,0:48:99:0,132,1887	0/0:37,0:37:99:0,104,1474	0/0:29,0:23:69.18:0,69,989	0/0:35,0:35:99:0,99,1408	0/0:112,0:111:99:0,298,4302	0/0:38,0:38:99:0,105,1504	0/0:24,0:24:72.24:0,72,1097	0/0:62,0:62:99:0,163,2318	1/1:5,15:20:33.02:597,33,0	0/0:48,0:47:99:0,132,1822	0/0:35,0:33:99:0,99,1508	0/0:25,0:25:75.23:0,75,1104
chr10	105411015	.	CTGTGTGTGTA	C	447.72	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.730;DP=1314;FS=2.786;HRun=0;HaplotypeScore=394.2041;InbreedingCoeff=0.9916;MQ=56.19;MQ0=16;MQRankSum=-3.288;QD=44.77;ReadPosRankSum=-1.174;VQSLOD=2.3955;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:68,0:69:99:0,153,5776	1/1:1,9:10:20.90:540,21,0	0/0:43,0:10:21.07:0,21,512	0/0:39,0:18:44.13:0,44,968	0/0:37,0:37:99:0,102,4761	0/0:22,0:22:36.22:0,36,585	0/0:38,0:34:38.92:0,39,597	0/0:62,0:60:99:0,166,4880	0/0:70,0:69:99:0,193,7680	0/0:79,0:77:99:0,220,8672	0/0:39,0:39:99:0,111,5079	0/0:58,0:58:99:0,171,6606	0/0:48,0:48:99:0,135,5036	0/0:33,0:33:84.24:0,84,2925	0/0:68,0:68:99:0,195,7240	0/0:54,0:54:99:0,143,5208	0/0:31,0:31:84.29:0,84,2958	0/0:39,0:39:92.48:0,92,4031	0/0:32,0:26:60.21:0,60,2141	0/0:36,0:36:99:0,102,4409	0/0:137,0:137:99:0,349,13248	0/0:49,0:49:99:0,138,5375	0/0:31,0:30:75:0,75,3475	0/0:59,0:59:99:0,144,6004	0/0:25,0:25:50.87:0,51,766	0/0:62,0:62:99:0,166,6092	0/0:26,0:26:66.21:0,66,2887	0/0:18,0:17:48.15:0,48,1767
chr10	105411021	.	GTGTA	G	2371.78	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=10.882;DP=1312;FS=21.677;HRun=0;HaplotypeScore=239.1917;InbreedingCoeff=0.8366;MQ=56.29;MQ0=13;MQRankSum=0.456;QD=25.23;ReadPosRankSum=2.455;VQSLOD=2.2155;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,144,3537	0/1:12,0:12:83.25:95,0,83	0/0:45,0:11:32.50:0,33,408	0/0:39,0:20:51.14:0,51,917	0/0:37,0:37:99:0,102,2647	1/1:4,16:20:44.82:754,45,0	1/1:4,34:34:38.33:738,38,0	0/0:66,0:64:99:0,187,4044	0/0:71,0:70:99:0,198,4913	0/0:79,0:78:99:0,229,5643	0/0:41,0:41:99:0,120,2927	0/0:61,0:61:99:0,174,4277	0/0:50,0:50:99:0,138,3352	0/0:34,0:34:87.24:0,87,1991	0/0:71,0:71:99:0,204,4838	0/0:51,0:51:99:0,128,3568	0/0:34,0:34:96.19:0,96,2120	0/0:38,0:38:99:0,102,2467	0/0:27,0:22:66.19:0,66,1546	0/0:38,0:38:99:0,108,2722	0/0:134,0:134:99:0,359,8552	0/0:49,0:49:99:0,129,3306	0/0:32,0:31:87.20:0,87,2087	0/0:58,0:58:99:0,147,3683	1/1:2,22:24:49.89:933,50,0	0/0:61,0:61:99:0,172,4289	0/0:22,0:22:63.22:0,63,1631	0/0:17,0:16:45.15:0,45,1144
chr10	105411149	.	C	CTG	458.05	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=1.485;DP=1399;FS=10.745;HRun=0;HaplotypeScore=205.1468;InbreedingCoeff=0.6127;MQ=56.55;MQ0=18;MQRankSum=0.531;QD=6.84;ReadPosRankSum=-1.929;VQSLOD=2.0146;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:54:99:0,112,1370	1/1:4,16:20:33.03:552,33,0	0/0:48,0:10:7.96:0,8,143	0/0:53,0:21:23.72:0,24,331	0/0:39,0:39:99:0,99,1234	0/0:43,0:43:22.72:0,23,242	0/0:49,0:42:1.06:0,1,63	0/0:76,0:70:99:0,135,1662	0/0:62,0:62:99:0,128,1663	0/0:71,0:71:99:0,178,2213	0/0:32,0:32:87.25:0,87,1065	0/0:58,0:58:99:0,147,1839	0/0:33,0:33:90.23:0,90,1101	0/0:52,0:51:99:0,147,1841	0/0:62,0:62:99:0,166,2072	0/0:52,0:52:99:0,132,1636	0/0:39,0:39:83.44:0,83,1051	0/0:40,0:40:72.41:0,72,1096	0/0:32,0:19:42.13:0,42,534	0/0:42,0:42:93.16:0,93,1231	0/0:117,0:116:99:0,274,3380	0/0:59,0:59:99:0,156,1948	0/0:33,0:33:87.75:0,88,1106	0/0:66,0:66:99:0,150,1809	0/1:47,0:46:1.12:1,0,145	0/0:66,0:65:99:0,159,1920	0/0:38,0:37:99:0,99,1239	0/0:13,0:13:36.05:0,36,424
chr10	105411157	.	GTGTT	G	1738.10	PASS	AB=0.612;AC=3;AF=0.054;AN=56;BaseQRankSum=8.386;DP=1402;FS=0.593;HRun=0;HaplotypeScore=248.2647;InbreedingCoeff=-0.0569;MQ=56.80;MQ0=15;MQRankSum=0.459;QD=12.07;ReadPosRankSum=3.687;VQSLOD=3.0740;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:53:99:0,126,3011	0/0:18,0:18:38.96:0,39,666	0/0:41,0:10:18.84:0,19,309	0/0:53,0:21:42.02:0,42,757	0/0:38,0:38:99:0,105,2637	0/1:13,29:42:99:966,0,293	0/1:21,28:43:99:213,0,778	0/0:68,0:64:99:0,165,3813	0/0:59,0:59:99:0,151,3733	0/0:77,0:77:99:0,216,5008	0/0:33,0:33:96.30:0,96,2283	0/0:61,0:61:99:0,178,4195	0/0:37,0:37:99:0,111,2511	0/0:57,0:57:99:0,168,4126	0/0:64,0:64:99:0,190,4568	0/0:51,0:51:99:0,150,3638	0/0:36,0:36:91.06:0,91,2300	0/0:43,0:43:99:0,113,2483	0/0:34,0:21:51.14:0,51,1211	0/0:41,0:41:99:0,116,2732	0/0:116,0:114:99:0,310,7409	0/0:57,0:57:99:0,162,4124	0/0:36,0:36:88.22:0,88,2403	0/0:65,0:66:99:0,175,3966	0/1:19,33:51:99:659,0,586	0/0:67,0:66:99:0,180,4107	0/0:35,0:34:99:0,105,2532	0/0:16,0:16:48.16:0,48,1149
chr10	105411615	.	AGGTGCTCCAACTTAACAGAGGCTGG	A	4036.70	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.827;DP=700;FS=5.383;HRun=0;HaplotypeScore=437.1311;InbreedingCoeff=0.9947;MQ=82.42;MQ0=0;MQRankSum=-7.190;QD=130.22;ReadPosRankSum=0.810;VQSLOD=2.5173;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,12983	0/0:8,0:8:24.08:0,24,2523	0/0:17,0:17:50.84:0,51,3200	0/0:23,0:23:63.17:0,63,2929	0/0:29,0:29:78.25:0,78,7299	1/1:2,6:8:21.07:1205,21,0	1/1:5,9:15:30.10:1717,30,0	0/0:36,0:36:99:0,105,8313	0/0:29,0:29:87.28:0,87,9136	0/0:23,0:23:69.23:0,69,6441	0/0:15,0:15:45.15:0,45,4287	0/0:26,0:26:78.26:0,78,7437	0/0:29,0:29:87.30:0,87,9464	0/0:24,0:24:69.21:0,69,6363	0/0:38,0:38:99:0,114,11087	0/0:19,0:19:54.19:0,54,5570	0/0:31,0:31:93.29:0,93,9864	0/0:25,0:25:75.26:0,75,8016	0/0:26,0:26:78.27:0,78,5843	0/0:22,0:22:66.21:0,66,5409	0/0:53,0:53:99:0,153,15844	0/0:29,0:29:84.17:0,84,7181	0/0:24,0:24:72.25:0,72,6374	0/0:31,0:31:93.32:0,93,9288	1/1:2,6:8:18.06:1114,18,0	0/0:29,0:29:81.28:0,81,8006	0/0:19,0:19:57.20:0,57,5984	0/0:18,0:18:54.19:0,54,5304
chr10	105411657	.	AG	A	1115.30	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.376;DP=519;FS=2.155;HRun=4;HaplotypeScore=73.5592;InbreedingCoeff=0.9601;MQ=76.26;MQ0=0;MQRankSum=-7.272;QD=27.88;ReadPosRankSum=-1.819;VQSLOD=2.3221;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.30:0,96,1322	0/0:8,0:8:21.54:0,22,291	0/0:17,0:16:9.98:0,10,303	0/0:10,1:11:18.03:0,18,222	0/0:10,0:10:27.08:0,27,361	1/1:0,13:13:36.11:431,36,0	1/1:0,19:19:48.15:575,48,0	0/0:27,0:27:75.22:0,75,991	0/0:27,0:27:78.26:0,78,1091	0/0:7,0:7:18.05:0,18,238	0/0:6,0:6:12.04:0,12,168	0/0:19,0:19:54.17:0,54,740	0/0:29,0:29:78.20:0,78,1006	0/0:20,0:20:51.16:0,51,697	0/0:33,0:33:96.32:0,96,1342	0/0:19,0:19:57.18:0,57,779	0/0:25,0:25:75.21:0,75,1011	0/0:28,0:28:72.17:0,72,948	0/0:17,0:17:48.14:0,48,653	0/0:8,0:8:24.07:0,24,319	0/0:35,0:35:96.24:0,96,1300	0/0:11,0:11:33.11:0,33,461	0/0:8,0:8:18.05:0,18,235	0/0:34,0:34:99:0,102,1356	1/1:0,8:8:21.06:251,21,0	0/0:11,0:11:27.09:0,27,378	0/0:25,0:25:66.22:0,66,915	0/0:12,0:12:33.11:0,33,462
chr10	105411803	.	G	GTGTTTGTT	3658.49	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-1.225;DP=694;FS=1.425;HRun=0;HaplotypeScore=169.6082;InbreedingCoeff=0.8642;MQ=69.91;MQ0=3;MQRankSum=-9.285;QD=42.54;ReadPosRankSum=-2.659;VQSLOD=2.7623;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:84.28:0,84,2045	1/1:7,0:8:12.04:381,12,0	0/0:32,0:27:14.98:0,15,254	0/0:37,0:34:47.29:0,47,1178	0/0:15,0:15:33.06:0,33,686	1/1:7,2:11:12.04:453,12,0	1/1:20,8:30:39.13:1559,39,0	0/0:36,0:36:45.13:0,45,946	0/0:22,0:22:51.18:0,51,1253	0/0:25,0:25:54.17:0,54,1283	0/0:17,0:17:30.08:0,30,711	0/0:24,0:24:48.16:0,48,1228	0/0:23,0:23:39.09:0,39,801	0/0:24,0:24:54.17:0,54,1329	0/0:31,0:31:66.19:0,66,1535	0/0:26,0:26:57.17:0,57,1288	0/0:34,0:34:81.21:0,81,1798	0/1:17,0:17:7.49:7,0,556	0/0:23,0:23:24.08:0,24,608	0/0:23,0:25:51.16:0,51,1176	0/0:20,0:20:33.11:0,33,816	0/0:27,0:27:54.18:0,54,1382	0/0:24,0:24:52.88:0,53,1213	0/0:35,0:35:90.29:0,90,2144	1/1:10,8:19:33.54:1259,34,0	0/0:29,0:29:63.20:0,63,1558	0/0:28,0:27:54.18:0,54,1343	0/0:13,0:13:33.11:0,33,844
chr10	105411951	.	C	CT	242.83	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.558;DP=597;FS=1.325;HRun=2;HaplotypeScore=113.6630;InbreedingCoeff=0.9953;MQ=76.46;MQ0=0;MQRankSum=-4.316;QD=30.35;ReadPosRankSum=1.739;VQSLOD=3.4215;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,102,1251	1/1:0,8:8:24.08:336,24,0	0/0:16,0:16:44.67:0,45,477	0/0:14,0:14:34.64:0,35,390	0/0:20,0:20:51.16:0,51,630	0/0:15,0:15:33.10:0,33,406	0/0:25,0:25:63.15:0,63,756	0/0:33,0:33:90.26:0,90,1084	0/0:17,0:17:48.13:0,48,581	0/0:27,0:27:73.72:0,74,869	0/0:17,0:17:48.15:0,48,595	0/0:27,0:27:78.23:0,78,954	0/0:15,0:15:42.13:0,42,521	0/0:12,0:12:30.08:0,30,358	0/0:19,0:19:54.16:0,54,656	0/0:21,0:21:60.19:0,60,744	0/0:28,0:28:75.20:0,75,912	0/0:15,0:15:42.13:0,42,519	0/0:24,0:24:69.22:0,69,853	0/0:21,0:21:57.18:0,57,706	0/0:30,0:30:81.22:0,81,977	0/0:21,0:21:48.13:0,48,574	0/0:10,0:10:30.09:0,30,371	0/0:37,0:37:99:0,105,1300	0/0:9,0:9:27.08:0,27,335	0/0:30,0:30:84.24:0,84,1017	0/0:31,0:31:90.28:0,90,1114	0/0:15,0:15:39.12:0,39,483
chr10	105412741	.	TG	T	2500.50	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.875;DP=449;FS=11.298;HRun=1;HaplotypeScore=44.6132;InbreedingCoeff=0.9757;MQ=83.77;MQ0=0;MQRankSum=-0.437;QD=36.24;ReadPosRankSum=-0.094;VQSLOD=2.3401;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.30:0,87,1386	0/0:7,0:7:18.05:0,18,264	0/0:12,0:12:25.64:0,26,489	0/0:17,0:17:48.16:0,48,729	0/0:7,0:7:21.05:0,21,308	1/1:0,13:13:36.12:503,36,0	1/1:0,40:40:99:1553,111,0	0/0:14,0:14:42.14:0,42,671	0/0:15,0:15:45.15:0,45,714	0/0:15,0:15:45.14:0,45,682	0/0:4,0:4:12.02:0,12,168	0/0:23,0:23:69.24:0,69,1103	0/0:10,0:10:30.10:0,30,476	0/0:24,0:24:69.23:0,69,1102	0/0:8,0:8:24.05:0,24,354	0/0:9,0:9:27.09:0,27,431	0/0:26,0:26:78.22:0,78,1195	0/0:17,0:17:51.17:0,51,815	0/0:11,0:11:30.10:0,30,463	0/0:6,0:6:18.04:0,18,261	0/0:36,0:36:99:0,108,1725	0/0:8,0:8:21.05:0,21,311	0/0:7,0:7:18.06:0,18,277	0/0:36,0:36:99:0,108,1725	1/1:0,16:16:42.14:587,42,0	0/0:14,0:14:33.56:0,34,482	0/0:13,0:13:39.13:0,39,623	0/0:11,0:11:33.11:0,33,527
chr10	105413018	.	AC	A	922.32	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=5.043;DP=406;FS=1.505;HRun=5;HaplotypeScore=42.5638;InbreedingCoeff=0.8287;MQ=90.03;MQ0=0;MQRankSum=-3.818;QD=23.06;ReadPosRankSum=2.537;VQSLOD=2.4748;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.20:0,75,972	0/0:2,0:2:6.02:0,6,82	0/0:20,0:19:36.92:0,37,445	0/0:16,0:16:45.13:0,45,572	0/0:4,0:4:9.03:0,9,123	1/1:1,10:11:27.55:307,28,0	1/1:3,24:27:60.17:681,60,0	0/0:20,0:20:48.09:0,48,591	0/0:16,0:16:45.13:0,45,596	0/0:5,0:5:15.05:0,15,203	0/0:5,0:5:12.03:0,12,148	0/0:28,0:28:78.25:0,78,1046	0/0:16,0:16:45.15:0,45,615	0/0:24,0:24:72.23:0,72,967	0/0:10,0:10:30.08:0,30,382	0/0:6,0:6:18.06:0,18,246	0/0:27,0:27:78.22:0,78,1018	0/0:19,0:19:57.17:0,57,752	0/0:14,0:14:39.12:0,39,516	0/0:4,0:4:6.02:0,6,82	0/0:51,0:51:99:0,138,1829	./.	0/0:4,0:4:9.03:0,9,123	0/0:21,0:21:54.14:0,54,687	1/1:0,2:2:6.02:68,6,0	0/0:13,0:13:36.10:0,36,463	0/0:11,0:11:30.10:0,30,410	0/0:4,0:4:12.04:0,12,164
chr10	105413945	.	T	TTTTA	1997.96	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-5.796;DP=385;FS=2.577;HRun=0;HaplotypeScore=58.8191;InbreedingCoeff=0.9538;MQ=80.25;MQ0=0;MQRankSum=-0.341;QD=46.46;ReadPosRankSum=0.974;VQSLOD=4.0583;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.16:0,57,935	0/0:6,0:6:15.04:0,15,235	0/0:13,0:13:26.87:0,27,385	0/0:13,0:13:14.68:0,15,143	0/0:25,0:25:63.17:0,63,1016	1/1:2,9:11:18.06:459,18,0	1/1:1,21:22:42.14:1068,42,0	0/0:19,0:19:45.09:0,45,647	0/0:9,0:9:27.07:0,27,418	0/0:12,0:12:33.06:0,33,548	0/0:10,0:10:30.08:0,30,471	0/0:14,0:14:33.09:0,33,549	0/0:7,0:7:18.06:0,18,315	0/0:9,0:9:27.07:0,27,413	0/0:12,0:12:30.07:0,30,450	0/0:14,0:14:36.08:0,36,548	0/0:24,0:24:66.18:0,66,1093	0/0:13,0:13:33.05:0,33,490	0/0:9,0:9:15.04:0,15,213	0/0:16,0:16:41.75:0,42,648	0/0:26,0:26:72.22:0,72,1208	0/0:11,0:11:30.05:0,30,412	0/0:10,0:10:24.07:0,24,393	0/0:12,0:12:36.12:0,36,629	1/1:1,9:10:24.08:612,24,0	0/0:21,0:21:45.14:0,45,732	0/0:10,0:10:30.07:0,30,464	0/0:8,0:8:9.03:0,9,145
chr10	105414185	.	C	CCAGACTA	3940.85	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-4.562;DP=466;FS=7.081;HRun=0;HaplotypeScore=104.7196;InbreedingCoeff=0.9606;MQ=84.20;MQ0=0;MQRankSum=-9.117;QD=80.43;ReadPosRankSum=-1.987;VQSLOD=3.4996;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.28:0,93,2246	0/0:3,0:3:9.03:0,9,237	0/0:16,0:16:30.13:0,30,782	0/0:13,0:13:38.49:0,38,818	0/0:10,0:10:30.10:0,30,791	1/1:3,7:12:18.06:721,18,0	1/1:9,18:32:72.25:2739,72,0	0/0:16,0:16:48.16:0,48,1185	0/0:19,0:19:57.18:0,57,1436	0/0:12,0:12:36.12:0,36,924	0/0:8,0:8:24.08:0,24,633	0/0:20,0:20:57.19:0,57,1444	0/0:15,0:15:42.14:0,42,1081	0/0:18,0:18:48.16:0,48,1195	0/0:13,0:13:39.13:0,39,996	0/0:13,0:13:39.12:0,39,969	0/0:31,0:31:93.29:0,93,2312	0/0:17,0:17:51.18:0,51,1345	0/0:13,0:13:36.12:0,36,933	0/0:10,0:10:30.10:0,30,791	0/0:48,0:48:99:0,144,3688	0/0:7,0:7:18.05:0,18,417	0/0:14,0:14:36.11:0,36,896	0/0:33,0:33:96.30:0,96,2418	1/1:0,4:5:12.04:481,12,0	0/0:12,0:12:36.12:0,36,923	0/0:17,0:17:51.18:0,51,1297	0/0:8,0:8:24.08:0,24,632
chr10	105416002	.	AGG	A	1095.76	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.934;DP=715;FS=3.175;HRun=3;HaplotypeScore=103.3100;InbreedingCoeff=0.9983;MQ=65.51;MQ0=2;MQRankSum=-10.799;QD=18.26;ReadPosRankSum=1.990;VQSLOD=1.3466;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,147,2770	0/0:7,0:7:21.07:0,21,405	0/0:36,0:27:72.02:0,72,1186	0/0:30,0:22:31.06:0,31,871	0/0:36,0:36:99:0,99,1860	1/1:2,17:19:44.91:360,45,0	1/1:3,21:24:64.77:487,65,0	0/0:21,0:20:60.14:0,60,940	0/0:25,0:25:75.23:0,75,1350	0/0:34,0:34:99:0,102,1923	0/0:23,0:23:69.24:0,69,1313	0/0:21,0:21:63.21:0,63,1186	0/0:22,0:22:66.20:0,66,1239	0/0:26,0:26:75.22:0,75,1347	0/0:26,0:26:73.12:0,73,1360	0/0:22,0:22:66.19:0,66,1162	0/0:30,0:30:90.24:0,90,1630	0/0:24,0:24:69.21:0,69,1265	0/0:19,0:19:54.18:0,54,997	0/0:24,0:24:72.24:0,72,1342	0/0:33,0:33:99:0,99,1864	0/0:20,0:20:60.19:0,60,1092	0/0:15,0:15:42.14:0,42,808	0/0:37,0:37:99:0,105,1990	1/1:0,17:17:50.75:392,51,0	0/0:29,0:29:87.30:0,87,1663	0/0:30,0:30:90.28:0,90,1668	0/0:13,0:13:36.59:0,37,693
chr10	105416006	.	AGG	A	1231.50	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.068;DP=699;FS=1.709;HRun=3;HaplotypeScore=101.2928;InbreedingCoeff=0.9985;MQ=68.14;MQ0=2;MQRankSum=-10.983;QD=20.52;ReadPosRankSum=1.450;VQSLOD=1.4830;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,2898	0/0:7,0:7:21.07:0,21,426	0/0:40,0:30:79.46:0,79,1384	0/0:31,0:23:46.92:0,47,991	0/0:33,0:33:96.33:0,96,1935	1/1:5,17:22:45.94:423,46,0	1/1:0,21:21:59.66:512,60,0	0/0:17,0:16:48.16:0,48,905	0/0:23,0:23:69.22:0,69,1340	0/0:35,0:35:99:0,102,2014	0/0:23,0:23:69.24:0,69,1390	0/0:22,0:22:66.23:0,66,1306	0/0:21,0:21:63.22:0,63,1277	0/0:24,0:24:72.23:0,72,1413	0/0:25,0:25:75.26:0,75,1497	0/0:18,0:18:54.19:0,54,1097	0/0:27,0:27:81.28:0,81,1622	0/0:22,0:22:66.23:0,66,1326	0/0:18,0:18:54.19:0,54,1062	0/0:25,0:25:75.26:0,75,1468	0/0:35,0:35:99:0,105,2039	0/0:18,0:18:54.19:0,54,1083	0/0:14,0:14:42.14:0,42,851	0/0:37,0:37:99:0,111,2153	1/1:0,17:17:50.89:440,51,0	0/0:30,0:30:90.31:0,90,1802	0/0:31,0:31:93.27:0,93,1782	0/0:13,0:13:36.59:0,37,711
chr10	105416492	.	GTATT	G	4294.24	PASS	AC=44;AF=0.917;AN=48;BaseQRankSum=4.278;DP=340;FS=1.186;HRun=0;HaplotypeScore=61.8729;InbreedingCoeff=0.3837;MQ=69.07;MQ0=4;MQRankSum=-0.602;QD=15.73;ReadPosRankSum=5.407;VQSLOD=4.2455;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,7:16:21.07:329,21,0	1/1:1,1:2:3.01:47,3,0	./.	0/0:2,0:2:0.89:0,1,2	1/1:7,5:11:12.04:188,12,0	1/1:10,0:21:21.02:196,21,0	1/1:1,0:3:6.01:56,6,0	0/0:40,0:40:36.12:0,36,819	1/1:9,4:13:12.04:188,12,0	1/1:4,1:5:3.01:47,3,0	1/1:8,2:10:6.02:94,6,0	1/1:9,3:12:9.03:141,9,0	1/1:5,5:10:11.80:188,12,0	./.	1/1:6,4:10:12.04:188,12,0	./.	1/1:7,13:19:27.09:404,27,0	1/1:9,14:22:39.13:611,39,0	1/1:18,7:24:18.06:282,18,0	1/1:4,1:5:3.01:47,3,0	1/1:6,2:8:3.01:47,3,0	./.	1/1:9,2:11:2.74:47,3,0	1/1:2,1:3:3.01:47,3,0	1/1:3,0:7:8.50:65,9,0	1/1:8,8:16:24.08:376,24,0	1/1:8,7:15:18.06:282,18,0	1/1:14,11:25:26.67:422,27,0
chr10	105417076	.	TC	T	1135.67	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.536;DP=419;FS=2.067;HRun=4;HaplotypeScore=68.0550;InbreedingCoeff=0.9458;MQ=104.93;MQ0=0;MQRankSum=-0.338;QD=27.70;ReadPosRankSum=1.045;VQSLOD=3.3394;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.23:0,81,1095	0/0:4,0:4:12.03:0,12,152	0/0:35,1:30:15.98:0,16,694	0/0:49,0:38:71.27:0,71,1031	0/0:4,0:4:12.04:0,12,167	1/1:1,9:10:27.08:324,27,0	1/1:1,18:19:45.08:523,45,0	0/0:25,0:25:72.23:0,72,974	0/0:19,0:19:51.17:0,51,708	0/0:10,0:10:24.07:0,24,322	0/0:7,0:7:21.07:0,21,294	0/0:14,0:14:36.08:0,36,472	0/0:13,0:13:36.12:0,36,484	0/0:18,0:18:48.15:0,48,654	0/0:11,0:11:30.10:0,30,419	0/0:15,0:15:45.15:0,45,629	0/0:11,0:11:33.11:0,33,459	0/0:12,0:12:33.11:0,33,461	0/0:12,0:12:30.05:0,30,381	0/0:5,0:5:12.04:0,12,167	0/0:20,0:20:54.18:0,54,748	0/0:6,0:6:18.06:0,18,252	0/0:4,0:4:12.04:0,12,168	0/0:15,0:15:39.13:0,39,546	1/1:0,12:12:36.11:432,36,0	0/0:17,0:17:51.16:0,51,697	0/0:7,0:7:21.07:0,21,290	0/0:10,0:10:27.09:0,27,378
chr10	105418250	.	TAC	T	220.80	PASS	AB=0.926;AC=12;AF=0.240;AN=50;BaseQRankSum=3.104;DP=471;FS=6.713;HRun=0;HaplotypeScore=60.8564;InbreedingCoeff=0.1216;MQ=68.00;MQ0=9;MQRankSum=0.427;QD=1.59;ReadPosRankSum=-0.131;VQSLOD=0.2251;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,1:23:12.01:0,12,136	0/0:5,0:5:6.02:0,6,84	./.	./.	0/1:21,3:23:34.96:55,0,35	1/1:8,0:8:3:26,3,0	1/1:20,2:24:11.70:92,12,0	./.	0/0:14,0:14:12.04:0,12,176	0/0:15,0:15:3:0,3,25	0/1:9,1:9:26.09:26,0,38	0/0:14,0:14:3.01:0,3,43	0/0:10,0:10:6.02:0,6,88	0/0:9,0:9:6.02:0,6,88	0/1:12,0:11:19.62:20,0,120	0/0:13,0:14:9.47:0,9,95	0/0:18,0:18:9.03:0,9,124	0/0:17,0:17:14.99:0,15,158	0/0:15,0:15:6.02:0,6,86	0/0:10,0:10:9.50:0,10,125	0/0:30,0:30:21.02:0,21,239	0/1:21,0:21:7.63:8,0,123	0/1:11,1:12:27.71:28,0,77	0/1:16,4:20:45.92:46,0,134	1/1:6,2:8:6.01:64,6,0	0/0:23,0:23:14.99:0,15,156	0/0:17,0:18:14.99:0,15,149	0/0:14,0:14:6.02:0,6,88
chr10	105418881	.	CAGAG	C	2547.37	PASS	AB=0.764;AC=37;AF=0.804;AN=46;BaseQRankSum=-2.033;DP=632;FS=39.479;HRun=0;HaplotypeScore=112.4852;InbreedingCoeff=0.3436;MQ=48.73;MQ0=30;MQRankSum=3.721;QD=5.08;ReadPosRankSum=2.044;VQSLOD=0.5931;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:32:10:162,10,0	1/1:7,0:6:6.01:56,6,0	./.	./.	0/1:29,1:30:0:0,0,0	0/1:1,0:13:0:0,0,0	1/1:7,0:23:3:28,3,0	0/0:26,0:24:3.46:0,3,24	1/1:38,2:37:24.03:399,24,0	1/1:23,6:29:11.40:149,11,0	./.	0/0:19,6:25:0.47:0,0,1	1/1:17,0:16:17.10:227,17,0	1/1:15,1:16:6.02:90,6,0	1/1:23,0:23:18.04:207,18,0	1/1:14,15:29:2.54:45,3,0	0/1:22,0:30:17.09:17,0,51	1/1:26,0:26:7.58:89,8,0	1/1:8,0:11:9.03:111,9,0	1/1:23,0:23:9.03:112,9,0	1/1:36,0:33:20.53:229,21,0	./.	1/1:19,0:19:3.01:31,3,0	1/1:32,3:35:14.35:191,14,0	./.	1/1:19,0:25:20.83:216,21,0	1/1:19,0:18:15.61:288,16,0	0/0:15,0:14:0.47:0,0,1
chr10	105419051	.	T	TA	2229.82	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-6.680;DP=658;FS=3.650;HRun=6;HaplotypeScore=65.4072;InbreedingCoeff=0.9995;MQ=80.55;MQ0=0;MQRankSum=-1.327;QD=28.59;ReadPosRankSum=0.905;VQSLOD=4.3828;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,153,1528	1/1:2,10:12:30.10:377,30,0	0/0:19,0:19:41.95:0,42,394	0/0:16,0:16:30.07:0,30,360	0/0:27,0:27:72.16:0,72,734	1/1:0,25:25:66.12:805,66,0	1/1:1,26:27:57.65:718,58,0	0/0:30,0:29:78.16:0,78,786	0/0:21,0:21:60.10:0,60,597	0/0:32,0:32:90.17:0,90,908	0/0:14,0:14:39.09:0,39,398	0/0:15,0:15:45.08:0,45,446	0/0:14,0:14:33.07:0,33,336	0/0:18,0:18:48.10:0,48,488	0/0:23,0:23:60.13:0,60,611	0/0:23,0:23:54.03:0,54,526	0/0:29,0:29:87.15:0,87,870	0/0:18,0:18:36.08:0,36,367	0/0:15,0:15:45.06:0,45,444	0/0:30,0:30:84.19:0,84,857	0/0:32,0:32:90.12:0,90,891	0/0:20,0:20:51.11:0,51,520	0/0:25,0:25:72.13:0,72,725	0/0:41,0:41:99:0,111,1131	1/1:0,14:14:39.12:491,39,0	0/0:26,0:26:75.16:0,75,760	0/0:25,0:25:69.14:0,69,698	0/0:14,0:14:39.04:0,39,386
chr10	105419497	.	G	GAAA	2455.36	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.872;DP=656;FS=0.000;HRun=7;HaplotypeScore=100.6618;InbreedingCoeff=0.9977;MQ=91.83;MQ0=0;MQRankSum=-10.356;QD=38.37;ReadPosRankSum=-1.093;VQSLOD=2.7561;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,1826	1/1:1,1:8:18.06:277,18,0	0/0:28,0:28:68.83:0,69,863	0/0:30,0:30:67.60:0,68,826	0/0:24,0:24:60.16:0,60,785	1/1:2,15:20:51.04:873,51,0	1/1:1,16:18:39.13:765,39,0	0/0:30,0:30:87.27:0,87,1170	0/0:18,0:18:45.12:0,45,596	0/0:26,0:26:63.18:0,63,844	0/0:19,0:19:54.18:0,54,737	0/0:20,0:20:57.18:0,57,762	0/0:20,0:21:60.11:0,60,778	0/0:25,0:25:60.15:0,60,801	0/0:28,0:28:75.24:0,75,1024	0/0:25,0:25:66.19:0,66,900	0/0:20,0:20:57.18:0,57,778	0/0:22,0:22:57.18:0,57,777	0/0:23,0:23:63.20:0,63,843	0/0:18,0:18:45.03:0,45,588	0/0:42,0:42:99:0,120,1619	0/0:24,0:24:72.23:0,72,965	0/0:17,0:17:48.15:0,48,639	0/0:26,0:26:72.21:0,72,963	1/1:4,13:18:41.97:700,42,0	0/0:19,0:19:45.09:0,45,592	0/0:28,0:27:81.27:0,81,1103	0/0:12,0:12:36.12:0,36,491
chr10	105420107	.	C	CCTT	5784.47	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.408;DP=678;FS=1.375;HRun=0;HaplotypeScore=100.5964;InbreedingCoeff=1.0000;MQ=86.97;MQ0=0;MQRankSum=-8.939;QD=63.57;ReadPosRankSum=-0.218;VQSLOD=6.1796;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.23:0,81,1283	1/1:1,13:14:42.13:921,42,0	0/0:23,0:23:57.01:0,57,855	0/0:25,0:25:72.21:0,72,1149	0/0:19,0:19:54.18:0,54,918	1/1:6,23:29:84.27:1821,84,0	1/1:3,20:23:63.20:1405,63,0	0/0:30,0:30:87.29:0,87,1461	0/0:28,0:28:84.29:0,84,1428	0/0:36,0:36:99:0,105,1790	0/0:23,0:23:69.18:0,69,1119	0/0:21,0:21:63.20:0,63,1047	0/0:13,0:13:39.13:0,39,665	0/0:19,0:19:57.18:0,57,946	0/0:33,0:33:96.33:0,96,1631	0/0:27,0:27:78.25:0,78,1298	0/0:21,0:21:63.20:0,63,1047	0/0:23,0:23:63.13:0,63,988	0/0:24,0:24:72.25:0,72,1220	0/0:25,0:25:72.23:0,72,1196	0/0:23,0:23:69.21:0,69,1148	0/0:29,0:29:84.27:0,84,1382	0/0:25,0:25:72.23:0,72,1201	0/0:36,0:36:99:0,105,1778	1/1:3,22:25:72.25:1638,72,0	0/0:25,0:25:69.24:0,69,1177	0/0:16,0:15:45.14:0,45,737	0/0:16,0:16:48.16:0,48,813
chr10	105420147	.	ATAT	A	3518.34	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.169;DP=579;FS=9.855;HRun=0;HaplotypeScore=96.0170;InbreedingCoeff=0.9987;MQ=82.61;MQ0=0;MQRankSum=-11.216;QD=43.44;ReadPosRankSum=-1.504;VQSLOD=4.7465;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.27:0,78,1741	1/1:3,12:15:39.09:587,39,0	0/0:21,0:21:54.18:0,54,1050	0/0:15,0:15:39.13:0,39,811	0/0:12,0:12:33.11:0,33,726	1/1:2,20:22:63.18:997,63,0	1/1:1,18:19:51.17:821,51,0	0/0:25,0:25:69.23:0,69,1466	0/0:27,0:27:81.26:0,81,1745	0/0:28,0:28:78.25:0,78,1659	0/0:24,0:24:63.22:0,63,1397	0/0:21,0:21:63.22:0,63,1404	0/0:9,0:9:24.08:0,24,536	0/0:12,0:12:33.11:0,33,715	0/0:26,0:26:72.23:0,72,1526	0/0:19,0:19:57.20:0,57,1273	0/0:22,0:22:66.21:0,66,1428	0/0:20,0:20:51.12:0,51,1091	0/0:25,0:25:75.25:0,75,1611	0/0:20,0:20:54.18:0,54,1172	0/0:17,0:17:51.18:0,51,1116	0/0:27,0:27:81.28:0,81,1808	0/0:19,0:19:54.17:0,54,1156	0/0:26,0:26:75.26:0,75,1675	1/1:2,23:25:69.24:1113,69,0	0/0:25,0:25:69.23:0,69,1478	0/0:18,0:17:51.16:0,51,1081	0/0:10,0:10:24.08:0,24,533
chr10	105420204	.	CGGG	C	2434.99	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.962;DP=549;FS=0.000;HRun=10;HaplotypeScore=102.3233;InbreedingCoeff=0.9911;MQ=78.56;MQ0=0;MQRankSum=-9.183;QD=30.44;ReadPosRankSum=3.500;VQSLOD=2.7273;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:60.16:0,60,1126	1/1:1,12:13:39.08:510,39,0	0/0:32,0:31:55.27:0,55,1070	0/0:16,0:14:30.05:0,30,495	0/0:11,0:12:24.05:0,24,422	1/1:7,21:28:63.16:838,63,0	1/1:5,19:24:54.17:736,54,0	0/0:15,0:17:18.03:0,18,267	0/0:27,0:27:63.22:0,63,1304	0/0:22,0:23:36.10:0,36,694	0/0:11,0:11:15.02:0,15,238	0/0:22,0:22:47.18:0,47,926	0/0:14,0:16:42.11:0,42,764	0/0:19,0:19:48.16:0,48,981	0/0:22,0:24:60.17:0,60,1118	0/0:20,0:21:57.17:0,57,1141	0/0:21,0:21:57.20:0,57,1182	0/0:20,0:20:51.12:0,51,964	0/0:16,0:16:30.10:0,30,581	0/0:15,0:15:22.43:0,22,385	0/0:16,0:17:39.10:0,39,720	0/0:15,0:17:31.29:0,31,562	0/0:10,0:13:27.05:0,27,448	0/0:20,0:22:39.58:0,40,751	1/1:3,12:15:39.08:511,39,0	0/0:20,0:23:48.10:0,48,878	0/0:20,0:19:48.13:0,48,914	0/0:13,0:13:36.12:0,36,745
chr10	105420695	.	TC	T	467.15	PASS	AB=0.913;AC=24;AF=0.480;AN=50;BaseQRankSum=6.513;DP=246;FS=0.000;HRun=2;HaplotypeScore=146.8592;InbreedingCoeff=-0.5098;MQ=33.35;MQ0=8;MQRankSum=-3.335;QD=2.11;ReadPosRankSum=1.645;VQSLOD=-0.3947;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:7:20.02:20,0,74	0/1:6,3:9:47.90:48,0,105	./.	./.	0/1:13,3:14:75.54:76,0,111	0/1:14,3:21:35.09:35,0,141	0/1:11,3:17:46.98:47,0,136	0/1:8,0:6:30.28:30,0,45	0/1:9,0:9:17.33:17,0,36	0/1:13,1:13:45.88:46,0,161	0/1:13,2:14:8.42:8,0,229	0/0:8,0:8:19.31:0,19,266	0/1:8,0:7:23.01:23,0,131	1/1:0,1:1:2.74:12,3,0	0/0:8,0:7:10.17:0,10,105	0/1:3,0:2:10.26:11,0,10	0/0:7,0:7:6.72:0,7,83	0/1:6,2:8:27.48:27,0,223	0/1:9,0:7:1.33:1,0,44	0/1:11,3:11:37.31:37,0,248	1/1:3,0:3:3.99:15,4,0	./.	0/1:12,1:13:29.60:30,0,67	0/1:5,0:5:0:0,0,0	0/1:12,0:13:1.73:2,0,116	0/1:15,3:18:99:107,0,286	0/1:3,2:5:4.26:4,0,89	0/1:4,0:4:6.16:6,0,56
chr10	105420696	.	C	CT	1616.09	PASS	AB=0.889;AC=26;AF=0.520;AN=50;BaseQRankSum=8.332;DP=252;FS=14.575;HRun=2;HaplotypeScore=142.6795;InbreedingCoeff=-0.5481;MQ=33.47;MQ0=8;MQRankSum=-4.672;QD=6.91;ReadPosRankSum=2.489;VQSLOD=-0.3029;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:5,3:7:76.31:96,0,76	0/1:7,2:9:56.34:163,0,56	./.	./.	0/1:13,3:14:8.67:9,0,94	0/1:17,2:21:4.43:413,0,4	0/1:16,1:17:14.98:111,0,15	0/1:8,0:7:25.11:90,0,25	0/1:8,1:9:28.19:31,0,28	0/1:9,5:13:99:223,0,117	0/1:13,2:14:60.60:61,0,153	0/0:8,0:8:4.22:0,4,170	0/1:6,2:7:22.60:23,0,106	1/1:1,0:1:2.37:8,2,0	0/1:7,1:7:18.91:19,0,67	0/1:3,0:2:10.08:11,0,10	0/1:8,0:8:2.78:3,0,87	0/0:8,0:8:14.13:0,14,177	0/1:10,0:7:37.69:68,0,38	0/1:14,0:11:0.40:0,0,199	1/1:3,1:4:5.37:33,5,0	./.	0/1:12,2:14:1.44:1,0,67	1/1:3,1:5:3:26,3,0	0/1:10,2:13:66.21:112,0,66	0/1:14,5:19:99:208,0,211	0/1:5,0:5:12.86:13,0,65	0/1:3,1:4:30.65:31,0,57
chr10	105420697	.	TTC	T	1094.03	PASS	AB=0.948;AC=19;AF=0.380;AN=50;BaseQRankSum=7.366;DP=255;FS=23.474;HRun=0;HaplotypeScore=147.6765;InbreedingCoeff=-0.5794;MQ=33.39;MQ0=8;MQRankSum=-3.602;QD=5.70;ReadPosRankSum=2.030;VQSLOD=1.6078;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:8:46.41:83,0,46	0/1:9,0:9:62.42:62,0,72	./.	./.	0/0:14,2:14:5.27:0,5,199	0/1:21,0:21:34.60:256,0,35	0/1:18,0:18:41.38:105,0,41	0/1:6,3:7:24.56:90,0,25	0/1:9,0:9:13.97:14,0,178	0/1:13,1:13:99:176,0,228	0/1:15,0:14:41.97:42,0,294	0/0:8,0:8:8.83:0,9,301	0/1:8,0:7:11.16:11,0,123	0/0:1,0:1:0.47:0,0,1	0/1:9,0:8:3.85:4,0,117	0/1:2,1:2:5.46:8,0,5	0/1:8,0:8:5.32:5,0,81	0/0:8,0:8:11.81:0,12,253	0/1:8,2:7:28.81:68,0,29	0/0:14,0:11:8.19:0,8,365	0/1:3,1:4:39.29:39,0,40	./.	0/0:14,0:14:7.25:0,7,234	0/1:5,0:5:24.20:24,0,30	0/1:13,0:13:37.48:60,0,37	0/1:18,1:19:99:153,0,365	0/1:5,0:5:7.82:8,0,150	0/1:4,0:4:22.71:23,0,87
chr10	105420704	.	TC	T	653.26	PASS	AB=0.885;AC=20;AF=0.385;AN=52;BaseQRankSum=8.363;DP=284;FS=1.814;HRun=1;HaplotypeScore=147.9392;InbreedingCoeff=-0.5159;MQ=33.89;MQ0=16;MQRankSum=-3.376;QD=3.04;ReadPosRankSum=4.261;VQSLOD=0.2068;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,2:9:35.86:36,0,159	0/1:8,0:11:52.50:53,0,91	./.	./.	0/1:13,3:14:92.73:93,0,201	0/1:19,0:21:52.65:53,0,194	0/0:19,0:19:26.62:0,27,199	0/1:12,0:8:56.79:57,0,76	0/1:8,1:9:19.53:20,0,205	0/1:14,5:17:99:116,0,356	0/1:14,2:15:44.58:45,0,306	0/0:7,0:7:21.06:0,21,305	0/1:6,2:7:24.39:24,0,144	1/1:1,0:1:2.74:12,3,0	0/1:8,1:8:8.90:9,0,143	0/0:2,0:1:2.37:0,2,8	0/0:10,0:10:26.87:0,27,278	0/0:9,0:9:2.16:0,2,270	0/1:10,1:7:42.31:76,0,42	0/1:16,0:13:19.27:19,0,378	0/1:3,1:4:2.59:3,0,42	0/0:2,0:2:3:0,3,25	0/1:11,3:14:9.74:10,0,237	0/1:4,1:5:2.42:2,0,42	0/0:11,0:16:3:0,3,144	0/1:18,5:22:99:136,0,422	0/1:7,0:7:20.15:20,0,167	0/1:3,1:4:12.98:13,0,96
chr10	105420707	.	TC	T	1088.26	PASS	AB=0.942;AC=19;AF=0.352;AN=54;BaseQRankSum=8.261;DP=298;FS=3.325;HRun=1;HaplotypeScore=142.2412;InbreedingCoeff=-0.5771;MQ=37.19;MQ0=18;MQRankSum=-4.249;QD=4.88;ReadPosRankSum=4.434;VQSLOD=0.8703;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:9:49.64:50,0,193	0/1:10,0:11:73.57:74,0,85	./.	0/0:2,0:1:0.47:0,0,1	0/1:13,3:14:99:184,0,201	0/1:21,0:21:78.31:78,0,135	0/0:20,0:20:17.44:0,17,143	0/1:13,0:9:70.08:70,0,87	0/1:10,0:10:14.79:15,0,243	0/1:18,1:17:99:111,0,356	0/1:15,1:15:82.85:83,0,313	0/0:7,0:7:21.04:0,21,302	0/1:8,0:7:40.38:40,0,142	0/1:1,1:2:18.90:35,0,19	0/1:9,0:8:24.78:25,0,141	0/0:4,0:3:3.90:0,4,40	0/0:11,0:11:29.96:0,30,357	0/1:8,1:9:17.59:18,0,237	0/1:11,0:7:44.23:72,0,44	0/1:13,3:13:85.77:86,0,379	0/1:6,0:6:0.38:0,0,63	0/0:2,0:2:3.01:0,3,43	0/1:13,0:13:69.34:69,0,240	0/0:6,0:6:0.09:0,0,81	0/0:17,0:17:3.04:0,3,147	0/1:20,3:22:99:185,0,470	0/1:6,1:7:26.39:26,0,206	0/1:4,0:4:9.85:10,0,97
chr10	105420825	.	A	AT	1631.02	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.655;DP=428;FS=0.000;HRun=6;HaplotypeScore=52.1878;InbreedingCoeff=0.9021;MQ=77.24;MQ0=0;MQRankSum=-2.691;QD=29.65;ReadPosRankSum=-1.333;VQSLOD=3.5299;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.07:0,60,599	1/1:2,5:7:21:230,21,0	0/0:19,0:18:27.34:0,27,331	0/0:11,0:12:6.31:0,6,208	0/0:18,0:18:54.12:0,54,549	1/1:3,15:18:48.09:584,48,0	1/1:3,10:13:30.09:372,30,0	0/0:38,0:38:90.16:0,90,900	0/0:21,0:21:63.14:0,63,642	0/0:18,0:18:48.08:0,48,480	0/0:16,0:16:48.11:0,48,487	0/0:10,0:10:30.07:0,30,306	0/0:12,0:12:36.08:0,36,367	0/0:12,0:12:33.06:0,33,330	0/0:27,0:26:66.15:0,66,673	0/0:10,0:10:27.05:0,27,269	0/0:18,0:17:48.11:0,48,489	0/0:14,0:14:39.09:0,39,398	0/0:14,0:14:27.05:0,27,275	0/0:16,0:16:45.10:0,45,459	0/0:7,0:7:12.02:0,12,122	0/0:6,0:6:18.03:0,18,177	0/0:10,0:10:24.05:0,24,245	0/0:9,0:9:21.05:0,21,214	1/1:0,17:17:48.15:604,48,0	0/0:13,1:14:1.35:0,1,329	0/0:23,0:23:60.11:0,60,605	0/0:8,0:8:24.05:0,24,245
chr10	105420950	.	ATTGAACTCAGGAC	A	4440.89	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.362;DP=529;FS=5.252;HRun=0;HaplotypeScore=187.2323;InbreedingCoeff=0.9871;MQ=64.48;MQ0=2;MQRankSum=-9.105;QD=79.30;ReadPosRankSum=1.648;VQSLOD=4.0584;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,8421	1/1:0,11:11:27.09:1105,27,0	0/0:28,0:21:63.20:0,63,3174	0/0:28,0:27:69.46:0,69,3811	0/0:18,0:18:48.12:0,48,2689	1/1:1,11:12:18.06:747,18,0	1/1:0,19:19:30.10:1229,30,0	0/0:30,0:30:90.29:0,90,4947	0/0:25,0:25:75.26:0,75,4816	0/0:11,0:11:33.11:0,33,2224	0/0:10,0:10:30.10:0,30,1794	0/0:15,0:15:45.15:0,45,2914	0/0:13,0:13:39.13:0,39,2244	0/0:15,0:15:45.15:0,45,2827	0/0:20,0:20:60.21:0,60,3704	0/0:18,0:18:54.19:0,54,3642	0/0:22,0:21:66.21:0,66,3850	0/0:20,0:19:54.19:0,54,3371	0/0:20,0:20:54.19:0,54,3286	0/0:16,0:16:45.15:0,45,2670	0/0:26,0:26:75.26:0,75,4877	0/0:7,0:7:21.03:0,21,1242	0/0:5,0:5:15.01:0,15,700	0/0:34,0:34:99:0,102,6580	1/1:2,12:14:33.11:1359,33,0	0/0:18,0:18:54.19:0,54,3336	0/0:24,0:24:72.25:0,72,4416	0/0:5,0:5:15.05:0,15,851
chr10	105421690	.	G	GA	4000.88	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=2.541;DP=739;FS=4.399;HRun=1;HaplotypeScore=69.6749;InbreedingCoeff=0.9999;MQ=88.93;MQ0=0;MQRankSum=-3.122;QD=41.68;ReadPosRankSum=0.348;VQSLOD=4.1232;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1695	1/1:0,11:11:33.11:494,33,0	0/0:35,0:35:99:0,102,1252	0/0:20,0:20:53.66:0,54,591	0/0:28,0:28:81.26:0,81,1049	1/1:0,27:27:78.26:1169,78,0	1/1:0,33:33:93.32:1394,93,0	0/0:23,0:23:60.19:0,60,778	0/0:25,0:25:72.23:0,72,933	0/0:21,0:21:60.16:0,60,736	0/0:16,0:16:48.16:0,48,621	0/0:25,0:25:75.23:0,75,957	0/0:25,0:25:72.23:0,72,932	0/0:30,0:30:81.25:0,81,1036	0/0:31,0:31:93.27:0,93,1177	0/0:28,0:28:84.26:0,84,1075	0/0:34,0:34:96.31:0,96,1246	0/0:30,0:30:87.28:0,87,1129	0/0:12,0:12:36.10:0,36,453	0/0:18,0:18:54.18:0,54,701	0/0:39,0:39:99:0,111,1408	0/0:28,0:28:84.26:0,84,1070	0/0:22,0:22:66.20:0,66,842	0/0:30,0:30:90.28:0,90,1153	1/1:0,25:25:63.21:944,63,0	0/0:33,0:33:99:0,99,1285	0/0:30,0:30:90.28:0,90,1152	0/0:15,0:15:45.15:0,45,584
chr10	105422760	.	G	GGTGTGGGC	3642.35	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.344;DP=676;FS=18.136;HRun=0;HaplotypeScore=165.1157;InbreedingCoeff=0.9792;MQ=75.36;MQ0=2;MQRankSum=-8.729;QD=50.59;ReadPosRankSum=-2.728;VQSLOD=1.9836;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,150,4046	1/1:2,0:5:12.04:347,12,0	0/0:16,0:16:33.19:0,33,993	0/0:26,0:24:48.53:0,49,1112	0/0:18,0:18:48.16:0,48,1312	1/1:3,13:22:33.11:1383,33,0	1/1:4,15:26:21.07:903,21,0	0/0:22,0:22:66.22:0,66,1781	0/0:23,0:23:69.21:0,69,1890	0/0:22,0:22:63.20:0,63,1694	0/0:8,0:8:21.07:0,21,574	0/0:20,0:20:54.19:0,54,1516	0/0:22,0:22:66.23:0,66,1767	0/0:13,0:13:39.12:0,39,997	0/0:12,0:12:36.12:0,36,1051	0/0:19,0:19:57.18:0,57,1544	0/0:47,0:46:99:0,141,3957	0/0:47,0:47:99:0,141,3971	0/0:16,0:16:48.15:0,48,1304	0/0:9,0:9:24.08:0,24,702	0/0:77,0:77:99:0,217,5428	0/0:14,0:14:42.14:0,42,1163	0/0:7,0:7:12.03:0,12,288	0/0:73,0:73:99:0,214,6169	1/1:3,13:18:24.08:1008,24,0	0/0:15,0:15:39.11:0,39,896	0/0:15,0:14:45.15:0,45,1269	0/0:12,0:12:36.11:0,36,887
chr10	105423142	.	A	AGCCT	3723.34	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.839;DP=657;FS=3.231;HRun=0;HaplotypeScore=124.9917;InbreedingCoeff=0.9896;MQ=81.61;MQ0=0;MQRankSum=-11.346;QD=61.04;ReadPosRankSum=-1.499;VQSLOD=4.7747;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,2476	1/1:1,3:4:12.04:289,12,0	0/0:23,0:23:69.23:0,69,1279	0/0:16,0:16:29.46:0,29,574	0/0:18,0:18:51.16:0,51,975	1/1:5,13:18:42.73:1106,43,0	1/1:6,19:25:65.75:1504,66,0	0/0:29,0:29:81.26:0,81,1484	0/0:28,0:28:81.28:0,81,1605	0/0:27,0:27:78.26:0,78,1504	0/0:9,0:9:27.09:0,27,539	0/0:26,0:26:78.24:0,78,1489	0/0:23,0:23:69.24:0,69,1352	0/0:21,0:21:63.19:0,63,1176	0/0:28,0:28:84.27:0,84,1621	0/0:25,0:25:69.22:0,69,1338	0/0:30,0:30:90.28:0,90,1713	0/0:17,0:17:48.16:0,48,904	0/0:17,0:17:42.10:0,42,881	0/0:8,0:8:21.05:0,21,380	0/0:56,0:56:99:0,160,3031	0/0:18,0:18:51.16:0,51,972	0/0:22,0:22:63.20:0,63,1184	0/0:34,0:34:99:0,102,2025	1/1:1,13:14:30.10:823,30,0	0/0:27,0:27:81.27:0,81,1568	0/0:37,0:37:99:0,111,2082	0/0:13,0:13:39.13:0,39,778
chr10	105423143	.	GT	G	959.07	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.859;DP=660;FS=3.220;HRun=1;HaplotypeScore=94.0771;InbreedingCoeff=0.9904;MQ=81.55;MQ0=0;MQRankSum=-11.447;QD=15.98;ReadPosRankSum=-0.353;VQSLOD=3.6218;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,2049	1/1:3,1:4:11.98:109,12,0	0/0:24,0:24:72.19:0,72,1046	0/0:15,0:15:29.07:0,29,454	0/0:18,0:18:54.16:0,54,807	1/1:14,3:17:40.01:324,40,0	1/1:19,6:25:61.08:460,61,0	0/0:28,0:28:81.26:0,81,1254	0/0:28,0:28:84.27:0,84,1319	0/0:27,0:27:81.28:0,81,1292	0/0:10,0:10:30.09:0,30,456	0/0:26,0:26:78.27:0,78,1247	0/0:24,0:24:72.23:0,72,1127	0/0:23,0:23:69.19:0,69,1033	0/0:28,0:28:84.29:0,84,1343	0/0:26,0:26:78.24:0,78,1199	0/0:30,0:30:90.31:0,90,1439	0/0:16,0:16:48.16:0,48,762	0/0:17,0:17:42.10:0,42,718	0/0:9,0:9:27.06:0,27,381	0/0:55,0:55:99:0,166,2628	0/0:19,0:19:54.17:0,54,840	0/0:21,0:21:63.21:0,63,1005	0/0:34,0:34:99:0,102,1630	1/1:13,1:14:29.85:224,30,0	0/0:27,0:27:81.23:0,81,1267	0/0:38,0:38:99:0,114,1793	0/0:13,0:13:39.13:0,39,623
chr10	105423147	.	T	TCAG	4007.70	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.647;DP=681;FS=3.790;HRun=0;HaplotypeScore=119.6291;InbreedingCoeff=0.9906;MQ=79.81;MQ0=0;MQRankSum=-11.863;QD=54.16;ReadPosRankSum=-1.310;VQSLOD=5.2970;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,2402	1/1:3,3:6:12.04:287,12,0	0/0:25,0:25:74.45:0,74,1219	0/0:13,0:13:34.32:0,34,489	0/0:18,0:18:54.19:0,54,990	1/1:8,13:21:53.21:1159,53,0	1/1:12,19:31:73.26:1777,73,0	0/0:26,0:26:75.24:0,75,1335	0/0:28,0:28:84.29:0,84,1552	0/0:28,0:28:84.28:0,84,1527	0/0:12,0:12:36.11:0,36,626	0/0:27,0:27:81.28:0,81,1504	0/0:23,0:23:69.24:0,69,1272	0/0:24,0:24:69.24:0,69,1261	0/0:29,0:29:87.30:0,87,1615	0/0:28,0:28:81.26:0,81,1463	0/0:31,0:31:90.31:0,90,1678	0/0:15,0:15:42.10:0,42,737	0/0:16,0:16:48.16:0,48,866	0/0:8,0:8:24.08:0,24,441	0/0:60,0:60:99:0,175,3211	0/0:19,0:19:54.18:0,54,988	0/0:21,0:21:60.19:0,60,1060	0/0:34,0:34:99:0,102,1894	1/1:3,13:16:36.10:785,36,0	0/0:28,0:28:78.27:0,78,1455	0/0:37,0:37:99:0,111,2021	0/0:13,0:13:39.13:0,39,704
chr10	105424646	.	AAC	A	58.30	PASS	AB=0.948;AC=14;AF=0.269;AN=52;BaseQRankSum=4.302;DP=632;FS=0.000;HRun=0;HaplotypeScore=83.3243;InbreedingCoeff=0.0215;MQ=63.92;MQ0=23;MQRankSum=1.601;QD=0.25;ReadPosRankSum=0.220;VQSLOD=1.3398;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,4:28:14.58:15,0,162	./.	./.	0/0:41,0:22:0:0,0,0	0/1:10,0:9:14.64:15,0,39	1/1:14,0:13:0.78:1,1,0	0/1:28,0:27:6.04:6,0,21	0/0:19,0:19:9.27:0,9,61	0/0:16,0:17:0.87:0,1,120	0/0:22,0:20:18.01:0,18,221	1/1:11,0:11:8.64:55,9,0	0/1:24,0:25:2.22:2,0,59	0/1:21,0:21:1.55:2,0,122	0/0:20,0:25:9.02:0,9,109	0/1:21,0:21:21.10:21,0,44	0/1:17,3:20:21.73:22,0,86	0/0:35,0:35:32.99:0,33,412	0/0:33,5:38:0.97:0,1,374	0/0:21,0:19:6.91:0,7,84	0/0:17,0:15:14.87:0,15,163	0/0:53,0:52:12.98:0,13,408	0/0:15,0:15:9.02:0,9,110	0/0:12,0:11:5.98:0,6,54	0/1:35,6:40:35.03:35,0,296	0/0:10,0:9:2.41:0,2,14	0/0:22,0:19:9:0,9,94	1/1:8,0:17:2.51:14,3,0	0/0:7,0:7:6.58:0,7,109
chr10	105424845	.	GAT	G	2290.41	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.669;DP=631;FS=5.275;HRun=0;HaplotypeScore=68.8747;InbreedingCoeff=0.9528;MQ=56.94;MQ0=23;MQRankSum=-3.811;QD=36.36;ReadPosRankSum=0.711;VQSLOD=5.6354;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,132,2646	0/0:2,0:2:6.02:0,6,121	0/0:30,0:15:45.09:0,45,830	0/0:20,0:14:42.13:0,42,716	0/0:12,0:12:33.11:0,33,669	1/1:0,18:18:39.13:626,39,0	1/1:0,27:27:66.23:1075,66,0	0/0:26,0:23:69.21:0,69,1295	0/0:26,0:26:69.24:0,69,1386	0/0:19,0:18:54.15:0,54,1055	0/0:11,0:11:30.10:0,30,596	0/0:21,0:20:57.16:0,57,1082	0/0:12,0:12:33.11:0,33,666	0/0:21,0:20:54.19:0,54,1085	0/0:23,0:23:54.19:0,54,1086	0/0:20,0:20:54.18:0,54,1094	0/0:36,0:36:90.29:0,90,1744	0/0:26,0:26:66.23:0,66,1319	0/0:16,0:15:45.15:0,45,893	0/0:4,0:4:12.04:0,12,243	0/0:54,0:53:99:0,154,3081	0/0:14,0:14:33.11:0,33,664	0/0:11,0:11:30.09:0,30,571	0/0:38,0:38:99:0,99,2010	1/1:0,18:17:45.15:732,45,0	0/0:30,0:29:84.13:0,84,1675	0/0:19,0:19:38.99:0,39,790	0/0:22,0:22:60.21:0,60,1168
chr10	105427741	.	A	AC	1065.57	PASS	AB=0.887;AC=11;AF=0.196;AN=56;BaseQRankSum=-4.416;DP=481;FS=2.042;HRun=9;HaplotypeScore=73.5836;InbreedingCoeff=0.5387;MQ=78.37;MQ0=1;MQRankSum=0.561;QD=8.20;ReadPosRankSum=-2.897;VQSLOD=1.4907;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:62.95:0,63,545	0/0:7,0:7:9.08:0,9,26	0/0:7,0:8:20.37:0,20,170	0/1:18,0:18:22.50:23,0,67	0/0:19,0:19:35.95:0,36,308	0/0:15,0:15:18.86:0,19,62	0/0:33,0:33:41.73:0,42,128	1/1:20,3:23:14.97:134,15,0	0/0:16,0:16:35.97:0,36,311	0/0:12,0:12:23.69:0,24,201	0/0:5,0:5:9:0,9,78	0/0:13,0:13:29.98:0,30,260	0/0:10,0:10:23.97:0,24,204	0/1:7,1:9:19.17:19,0,70	0/0:20,0:20:53.98:0,54,468	0/0:11,0:12:26:0,26,214	0/0:37,0:38:92.02:0,92,787	0/0:16,0:16:32.90:0,33,277	0/1:11,4:15:18.43:167,0,18	1/1:4,1:5:6:58,6,0	1/1:9,27:35:54.15:597,54,0	0/0:11,0:11:23.91:0,24,199	0/0:7,0:7:14.99:0,15,129	0/0:34,0:34:74.97:0,75,650	0/0:17,0:17:18.11:0,18,53	0/0:15,0:15:26.94:0,27,228	1/1:7,16:23:0.75:223,1,0	0/0:10,0:10:20.99:0,21,182
chr10	105427749	.	CCG	C	1836.67	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.884;DP=484;FS=1.805;HRun=0;HaplotypeScore=76.0743;InbreedingCoeff=0.9376;MQ=80.71;MQ0=1;MQRankSum=-3.868;QD=26.24;ReadPosRankSum=3.252;VQSLOD=4.4207;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.08:0,72,1066	1/1:1,5:6:15.52:205,16,0	0/0:13,0:13:28.91:0,29,324	0/0:15,0:15:15.17:0,15,253	0/0:18,0:18:44.91:0,45,625	1/1:3,12:15:30.06:388,30,0	1/1:0,31:31:75.12:958,75,0	0/0:28,0:28:32.68:0,33,282	0/0:16,0:16:42.09:0,42,661	0/0:11,0:11:29.95:0,30,424	0/0:6,0:6:17.97:0,18,218	0/0:14,0:14:39.06:0,39,571	0/0:13,0:13:32.97:0,33,443	0/0:11,0:11:26.85:0,27,305	0/0:20,0:20:60.17:0,60,971	0/0:14,0:14:32.93:0,33,478	0/0:36,0:36:99:0,102,1609	0/0:18,0:18:48.40:0,48,649	0/0:13,0:12:21.42:0,21,308	0/0:3,0:3:2.92:0,3,32	0/0:38,0:37:75:0,75,730	0/0:12,0:12:27.06:0,27,409	0/0:7,0:7:17.86:0,18,205	0/0:28,0:28:75.26:0,75,1273	1/1:2,16:18:35.96:444,36,0	0/0:16,0:16:45:0,45,574	0/0:27,0:28:42.69:0,43,430	0/0:9,0:9:27.05:0,27,406
chr10	105429075	.	CTT	C	1741.32	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.093;DP=635;FS=3.045;HRun=11;HaplotypeScore=84.0896;InbreedingCoeff=0.9099;MQ=67.09;MQ0=0;MQRankSum=-0.568;QD=22.32;ReadPosRankSum=2.506;VQSLOD=3.5218;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,1494	0/0:2,0:8:12.48:0,12,43	0/0:4,0:5:11.39:0,11,98	0/0:13,0:13:1.83:0,2,206	0/0:34,0:35:96.29:0,96,1390	1/1:4,22:26:60.14:639,60,0	1/1:3,18:21:45.11:479,45,0	0/0:27,0:28:66.19:0,66,939	0/0:23,0:24:53.65:0,54,771	0/0:36,0:36:93.30:0,93,1390	0/0:21,0:21:60.18:0,60,881	0/0:25,0:28:71.17:0,71,943	0/0:19,0:19:51.13:0,51,699	0/0:11,0:11:33.11:0,33,508	0/0:23,0:23:57.19:0,57,876	0/0:22,0:23:54.18:0,54,814	0/0:28,0:28:75.19:0,75,1050	0/0:17,0:18:53.62:0,54,727	0/0:17,0:18:33.06:0,33,461	0/0:33,0:36:99:0,104,1406	0/0:18,0:18:33.11:0,33,508	0/0:25,0:29:78.24:0,78,1118	0/0:16,0:16:36.12:0,36,554	0/0:20,0:20:57.19:0,57,878	1/1:4,27:31:72.17:766,72,0	0/0:26,0:27:59.67:0,60,845	0/0:19,0:21:53.65:0,54,745	0/0:13,0:14:38.60:0,39,539
chr10	105430228	.	A	AAAGAAAGG	5367.29	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-7.725;DP=623;FS=8.287;HRun=0;HaplotypeScore=136.0338;InbreedingCoeff=0.9625;MQ=61.24;MQ0=2;MQRankSum=-10.627;QD=69.71;ReadPosRankSum=2.369;VQSLOD=4.6859;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:75.23:0,75,1836	1/1:1,5:7:9.03:381,9,0	0/0:12,0:7:16.28:0,16,246	0/0:10,0:8:8.86:0,9,178	0/0:28,0:28:66.20:0,66,1660	1/1:5,18:23:36.12:1537,36,0	1/1:2,10:15:21.07:897,21,0	0/0:30,0:29:60.17:0,60,1341	0/0:31,0:31:66.21:0,66,1676	0/0:28,0:28:78.22:0,78,1904	0/0:32,0:32:87.26:0,87,2127	0/0:17,0:17:36.12:0,36,966	0/0:20,0:20:45.14:0,45,1122	0/0:21,0:21:54.16:0,54,1360	0/0:25,0:25:60.21:0,60,1605	0/0:32,0:32:84.27:0,84,2187	0/0:22,0:21:60.21:0,60,1579	0/0:28,0:28:47.16:0,47,1475	0/0:18,0:16:36.11:0,36,803	0/0:23,0:23:66.21:0,66,1602	0/0:19,0:19:48.10:0,48,992	0/0:15,0:15:39.08:0,39,821	0/0:25,0:25:72.22:0,72,1741	0/0:15,0:15:38.93:0,39,952	1/1:3,26:32:60.21:2552,60,0	0/0:21,0:21:54.17:0,54,1310	0/0:25,0:24:48.13:0,48,1145	0/0:15,0:15:45.12:0,45,1094
chr10	105431327	.	T	TTATAGTA	6440.71	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=0.023;DP=487;FS=1.075;HRun=0;HaplotypeScore=111.2331;InbreedingCoeff=0.9848;MQ=73.58;MQ0=0;MQRankSum=-11.251;QD=88.23;ReadPosRankSum=-1.453;VQSLOD=5.0478;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.07:0,72,1873	1/1:6,5:11:27.09:978,27,0	0/0:13,0:12:27.05:0,27,565	0/0:9,0:9:27.09:0,27,597	0/0:22,0:22:60.21:0,60,1519	1/1:12,12:24:63.20:2179,63,0	1/1:3,7:11:24.08:911,24,0	0/0:34,0:34:90.28:0,90,2015	0/0:16,0:16:42.13:0,42,1035	0/0:30,0:30:78.27:0,78,2013	0/0:28,0:28:84.29:0,84,2138	0/0:13,0:13:39.13:0,39,1003	0/0:10,0:10:27.07:0,27,593	0/0:15,0:15:45.15:0,45,1123	0/0:15,0:15:42.14:0,42,1086	0/0:6,0:6:15.04:0,15,338	0/0:20,0:20:60.19:0,60,1406	0/0:21,0:21:57.18:0,57,1424	0/0:21,0:21:54.19:0,54,1396	0/0:16,0:16:48.15:0,48,1191	0/0:14,0:14:33.11:0,33,836	0/0:13,0:13:30.10:0,30,715	0/0:13,0:13:27.07:0,27,594	0/0:5,0:5:12.04:0,12,311	1/1:13,14:27:63.22:2374,63,0	0/0:24,0:24:69.22:0,69,1664	0/0:16,0:15:42.14:0,42,1006	0/0:12,0:12:36.12:0,36,905
chr10	105431385	.	G	GT	1009.01	PASS	AB=0.863;AC=8;AF=0.143;AN=56;BaseQRankSum=-3.229;DP=464;FS=0.000;HRun=12;HaplotypeScore=57.4984;InbreedingCoeff=0.5146;MQ=68.79;MQ0=2;MQRankSum=0.648;QD=10.85;ReadPosRankSum=0.486;VQSLOD=2.8347;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:68.21:0,68,489	0/0:3,0:14:22.40:0,22,66	0/0:13,0:10:1.20:0,1,22	0/0:9,0:9:12.42:0,12,91	0/0:24,0:24:23.10:0,23,302	1/1:6,16:22:26.19:416,26,0	0/1:7,4:12:1.06:133,0,1	0/0:29,1:30:24.39:0,24,340	0/0:17,0:18:37.80:0,38,269	0/0:22,1:25:14.51:0,15,259	0/0:15,0:16:31.83:0,32,225	0/1:10,1:11:2.36:2,0,148	0/0:10,0:10:20.85:0,21,153	0/0:9,0:9:14.85:0,15,107	0/0:13,0:15:25.82:0,26,179	0/1:8,1:9:1.02:1,0,129	0/0:21,0:21:53.55:0,54,387	0/0:24,0:26:63.64:0,64,446	0/0:14,2:16:6.44:0,6,203	0/0:21,0:21:34.76:0,35,334	0/0:10,0:10:20.85:0,21,153	0/0:8,0:8:17.84:0,18,130	0/0:13,0:13:20.78:0,21,150	0/0:3,0:3:8.95:0,9,66	1/1:5,19:26:62.77:583,63,0	0/0:27,0:30:51.43:0,51,385	0/0:11,0:11:23.08:0,23,160	0/1:12,1:13:5.31:5,0,129
chr10	105433439	.	TAC	T	251.08	PASS	AB=0.920;AC=15;AF=0.278;AN=54;BaseQRankSum=3.060;DP=553;FS=0.000;HRun=0;HaplotypeScore=73.6314;InbreedingCoeff=-0.2598;MQ=75.04;MQ0=8;MQRankSum=0.711;QD=0.89;ReadPosRankSum=0.876;VQSLOD=0.7028;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:36:0.71:1,0,366	0/0:7,0:9:5.71:0,6,64	0/0:32,0:21:3.01:0,3,40	./.	0/0:7,0:7:2.87:0,3,44	0/0:18,0:18:12.01:0,12,138	0/0:15,0:19:11.80:0,12,108	0/1:19,0:19:26.56:27,0,39	0/1:17,2:20:20.08:20,0,275	0/0:17,0:17:11.86:0,12,116	0/0:4,0:4:6.01:0,6,70	0/1:10,3:12:16.74:17,0,165	0/1:12,2:14:18.01:18,0,165	0/0:9,0:9:9.03:0,9,129	0/1:18,2:20:2.97:3,0,354	0/0:16,0:16:27.09:0,27,397	0/1:27,1:28:58.81:59,0,315	0/0:35,0:35:25.18:0,25,501	0/1:16,0:18:14.14:50,0,14	0/0:9,0:9:9.02:0,9,113	0/0:48,0:49:24.96:0,25,476	0/1:14,0:16:1.66:2,0,78	1/1:7,1:8:3.01:33,3,0	0/1:41,3:45:74.06:74,0,714	0/0:7,0:11:6:0,6,52	0/1:21,0:21:44.88:45,0,184	0/1:14,1:15:29.11:29,0,152	0/1:9,1:10:15:15,0,201
chr10	105433634	.	AC	A	50.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.498;DP=611;FS=4.630;HRun=5;HaplotypeScore=62.0623;InbreedingCoeff=0.9351;MQ=81.69;MQ0=0;MQRankSum=-0.932;QD=10.03;ReadPosRankSum=0.581;VQSLOD=0.5700;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.24:0,72,985	1/1:0,5:5:12.03:136,12,0	0/0:13,0:13:30.08:0,30,388	0/0:24,0:25:63.18:0,63,805	0/0:10,0:10:27.09:0,27,368	0/0:17,0:17:45.15:0,45,612	0/0:26,0:26:78.18:0,78,997	0/0:25,0:25:63.21:0,63,859	0/0:30,0:30:90.28:0,90,1199	0/0:24,0:24:66.21:0,66,888	0/0:12,0:12:33.10:0,33,435	0/0:23,0:23:66.17:0,66,867	0/0:23,0:23:69.20:0,69,908	0/0:20,0:20:60.19:0,60,806	0/0:22,0:22:63.20:0,63,848	0/0:24,0:24:69.22:0,69,929	0/0:35,0:35:99:0,99,1354	0/0:25,0:25:69.23:0,69,940	0/0:17,0:17:36.12:0,36,492	0/0:9,0:9:24.08:0,24,328	0/0:60,0:60:99:0,178,2393	0/0:14,0:14:42.14:0,42,566	0/0:16,0:16:42.14:0,42,573	0/0:43,0:43:99:0,120,1624	0/0:15,0:15:39.12:0,39,517	0/0:31,0:31:87.25:0,87,1144	0/0:18,0:18:54.16:0,54,720	0/0:5,0:5:12.04:0,12,164
chr10	105435129	.	A	AAAAT	980.56	PASS	AC=8;AF=0.174;AN=46;BaseQRankSum=-5.637;DP=264;FS=0.000;HRun=0;HaplotypeScore=43.0529;InbreedingCoeff=0.5343;MQ=67.71;MQ0=4;MQRankSum=1.103;QD=19.61;ReadPosRankSum=0.185;VQSLOD=2.8533;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:18.06:0,18,273	1/1:4,0:5:3:27,3,0	./.	./.	0/0:3,0:3:2.92:0,3,25	0/0:5,0:14:11.38:0,11,92	./.	0/0:36,0:35:5.93:0,6,62	0/0:2,0:2:3.01:0,3,46	1/1:4,4:8:9.03:170,9,0	1/1:2,3:5:9.03:211,9,0	0/0:4,0:4:3.01:0,3,46	0/0:4,0:4:3.01:0,3,46	0/0:8,0:8:9.02:0,9,120	0/0:5,0:5:6.02:0,6,91	0/0:3,0:3:3.01:0,3,46	1/1:10,21:32:30.10:702,30,0	0/0:16,0:16:30.10:0,30,451	0/0:16,0:16:21.07:0,21,321	0/0:3,0:3:3.01:0,3,46	0/0:7,0:7:9.03:0,9,137	./.	0/0:7,0:7:3.01:0,3,46	./.	0/0:8,0:11:9.01:0,9,84	0/0:6,0:6:12:0,12,159	0/0:8,0:8:15.04:0,15,210	0/0:14,0:14:18.04:0,18,248
chr10	105435552	.	TA	T	1300.80	PASS	AB=0.901;AC=21;AF=0.375;AN=56;BaseQRankSum=6.776;DP=485;FS=0.406;HRun=15;HaplotypeScore=65.5984;InbreedingCoeff=0.5956;MQ=65.99;MQ0=1;MQRankSum=0.529;QD=5.71;ReadPosRankSum=3.888;VQSLOD=2.4911;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:34:42.95:0,43,574	1/1:1,7:8:20.62:134,21,0	0/1:23,2:12:33.08:58,0,33	0/0:8,0:8:5.53:0,6,40	0/0:23,0:24:37.05:0,37,361	1/1:1,0:8:12.22:35,12,0	1/1:1,0:11:18.29:53,18,0	0/1:24,14:37:39.32:151,0,39	0/0:8,1:10:20.78:0,21,160	0/0:19,0:21:26.37:0,26,198	0/0:20,1:22:13.63:0,14,320	0/0:9,2:11:10.66:0,11,202	0/1:10,1:11:8.71:9,0,159	0/0:8,0:10:7.44:0,7,159	0/1:14,1:16:3.21:3,0,164	0/0:13,1:14:22.48:0,22,295	0/0:23,1:24:17.13:0,17,367	0/0:26,0:29:55.28:0,55,430	1/1:6,13:20:39.18:239,39,0	1/1:3,17:20:39.68:236,40,0	1/1:3,9:13:19.76:121,20,0	0/0:2,0:2:3:0,3,26	0/1:5,0:5:1.79:2,0,74	0/0:7,0:6:14.99:0,15,128	1/1:1,0:21:40.68:117,41,0	0/0:21,0:26:28:0,28,403	1/1:5,23:31:16.54:341,17,0	0/0:8,1:12:7.41:0,7,167
chr10	105436051	.	TA	T	733.91	PASS	AB=0.917;AC=9;AF=0.167;AN=54;BaseQRankSum=9.155;DP=449;FS=14.502;HRun=9;HaplotypeScore=47.6491;InbreedingCoeff=0.7861;MQ=61.76;MQ0=8;MQRankSum=-0.453;QD=13.11;ReadPosRankSum=3.564;VQSLOD=1.5895;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:77.89:0,78,869	1/1:4,8:12:17.96:146,18,0	0/0:45,0:11:0.34:0,0,161	0/0:40,0:12:19.07:0,19,143	0/0:18,1:18:23.68:0,24,525	1/1:1,12:13:30.02:275,30,0	1/1:0,6:6:18.01:165,18,0	0/0:30,0:30:81.21:0,81,910	0/0:9,0:9:27.07:0,27,303	0/0:18,0:18:51.15:0,51,587	0/1:10,1:11:3.11:3,0,218	0/0:8,0:8:24.07:0,24,277	0/0:7,0:7:18.05:0,18,207	0/0:10,0:10:24.07:0,24,277	0/0:3,0:3:6.02:0,6,69	0/0:7,0:7:15.02:0,15,154	0/0:31,0:31:78.23:0,78,899	0/0:22,0:22:54.16:0,54,620	0/0:21,0:20:54.11:0,54,592	0/0:14,1:15:11.72:0,12,379	0/0:11,0:10:30.06:0,30,327	./.	0/0:6,0:6:12.03:0,12,138	0/0:4,0:4:9.03:0,9,104	1/1:1,13:14:33.02:302,33,0	0/0:20,0:20:54.14:0,54,606	0/0:22,0:22:63.15:0,63,713	0/0:14,0:15:41.91:0,42,433
chr10	105438103	.	GGTCAGCTAGCTCAGGGAGGTTGTGACCTGGGAAAAAACA	G	4290.94	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.983;DP=718;FS=3.446;HRun=0;HaplotypeScore=653.4542;InbreedingCoeff=0.9071;MQ=79.90;MQ0=0;MQRankSum=-5.551;QD=89.39;ReadPosRankSum=2.782;VQSLOD=0.1435;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,157,22571	1/1:4,4:8:6.02:603,6,0	0/0:17,0:17:45.14:0,45,2204	0/0:20,0:20:45.87:0,46,3313	0/0:26,0:26:78.27:0,78,11130	1/1:8,9:17:24.08:2408,24,0	1/1:11,0:11:3.01:74,3,0	0/0:35,0:35:96.32:0,96,7818	0/0:29,0:29:87.28:0,87,11531	0/0:24,0:24:72.24:0,72,9016	0/0:18,0:18:54.19:0,54,9013	0/0:25,0:25:75.20:0,75,10261	0/0:20,0:20:57.20:0,57,8880	0/0:33,0:33:99:0,99,13996	0/0:33,0:33:99:0,99,13514	0/0:26,0:26:75.24:0,75,10061	0/0:43,0:43:99:0,123,16885	0/0:29,0:29:81.28:0,81,10228	0/0:26,0:26:66.23:0,66,7318	0/0:18,0:18:54.19:0,54,6773	0/0:59,0:59:99:0,175,23519	0/0:23,0:23:69.22:0,69,8834	0/0:17,0:17:51.16:0,51,6138	0/0:28,0:28:84.25:0,84,11157	1/1:5,7:11:12.04:1206,12,0	0/0:32,0:32:87.29:0,87,11298	0/0:24,0:24:69.24:0,69,9306	0/0:10,0:10:30.10:0,30,4841
chr10	105438105	.	T	TC	314.97	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.561;DP=727;FS=4.958;HRun=1;HaplotypeScore=106.6705;InbreedingCoeff=0.8295;MQ=81.22;MQ0=0;MQRankSum=-6.344;QD=9.00;ReadPosRankSum=-0.109;VQSLOD=1.0403;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,157,2025	1/1:7,0:7:3.46:91,3,0	0/0:19,0:19:53.98:0,54,605	0/0:20,0:21:54.53:0,55,650	0/0:27,0:27:78.25:0,78,1013	1/1:17,0:17:7.36:203,7,0	1/1:7,4:11:5.45:136,5,0	0/0:34,0:34:99:0,99,1260	0/0:29,0:29:87.27:0,87,1116	0/0:25,0:25:72.23:0,72,923	0/0:18,0:18:54.18:0,54,701	0/0:25,0:25:75.19:0,75,941	0/0:20,0:20:57.19:0,57,740	0/0:34,0:34:99:0,102,1307	0/0:34,0:34:99:0,102,1310	0/0:25,0:25:75.23:0,75,960	0/0:44,0:44:99:0,120,1524	0/0:29,0:29:81.26:0,81,1052	0/0:26,0:26:72.23:0,72,923	0/0:19,0:19:54.18:0,54,701	0/0:58,0:58:99:0,175,2257	0/0:23,0:23:69.21:0,69,881	0/0:18,0:18:54.15:0,54,670	0/0:31,0:31:87.20:0,87,1092	0/0:12,0:11:7.27:0,7,18	0/0:32,0:32:87.27:0,87,1117	0/0:24,0:24:69.22:0,69,896	0/0:10,0:10:30.10:0,30,389
chr10	105438684	.	TAA	T	185.59	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=3.054;DP=222;FS=7.729;HRun=6;HaplotypeScore=26.5685;InbreedingCoeff=0.5830;MQ=69.98;MQ0=1;MQRankSum=0.036;QD=13.26;ReadPosRankSum=0.985;VQSLOD=-0.6936;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.08:0,39,552	1/1:2,0:2:5.99:49,6,0	0/0:11,1:6:3.62:0,4,69	0/0:12,0:8:11.60:0,12,97	0/0:6,0:6:9.02:0,9,129	1/1:0,8:8:15.05:200,15,0	1/1:0,3:3:3.01:40,3,0	0/0:29,0:29:78.24:0,78,1289	0/0:2,0:2:6.01:0,6,77	0/0:13,0:13:31.63:0,32,374	0/0:8,0:8:12.49:0,12,130	0/0:6,0:6:15.04:0,15,224	0/0:1,0:1:3.01:0,3,54	0/0:1,0:1:3.01:0,3,50	0/0:3,0:3:6.01:0,6,55	0/0:1,0:1:3.01:0,3,54	0/0:34,0:34:96.26:0,96,1543	0/0:13,0:13:36.05:0,36,549	0/0:10,0:10:21.05:0,21,282	0/0:7,0:7:21.04:0,21,265	0/0:4,0:4:12.04:0,12,216	./.	0/0:6,0:6:9:0,9,78	0/0:5,0:4:9:0,9,121	1/1:1,0:1:3:25,3,0	0/0:4,0:4:12.03:0,12,187	0/0:5,0:5:15.05:0,15,257	0/0:10,0:10:30.10:0,30,509
chr10	105440070	.	T	TAC	891.44	PASS	AB=0.920;AC=10;AF=0.192;AN=52;BaseQRankSum=3.887;DP=644;FS=3.650;HRun=0;HaplotypeScore=104.7709;InbreedingCoeff=0.2042;MQ=67.14;MQ0=11;MQRankSum=-2.086;QD=5.09;ReadPosRankSum=-1.167;VQSLOD=2.6718;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:46,0:46:17.11:17,0,393	1/1:7,4:12:12.50:161,13,0	./.	./.	0/0:18,0:18:15.04:0,15,164	1/1:15,10:25:36.09:516,36,0	0/1:18,3:21:41.23:119,0,41	0/0:19,0:18:0.47:0,0,1	0/0:19,0:20:35.91:0,36,366	0/0:25,0:26:30.40:0,30,419	0/0:14,0:16:26.88:0,27,268	0/0:24,0:24:1.79:0,2,399	0/0:15,0:15:21.06:0,21,230	0/0:29,0:30:44.88:0,45,451	0/1:22,2:24:14.72:15,0,243	0/0:27,0:28:41.76:0,42,413	0/0:30,0:31:37.05:0,37,528	0/0:17,0:17:27.07:0,27,292	0/1:10,0:10:27.22:27,0,86	0/0:25,0:25:24.02:0,24,242	0/0:37,0:37:39.37:0,39,391	0/0:17,0:17:18.04:0,18,197	0/1:21,0:21:22.34:22,0,167	0/0:40,0:41:53.57:0,54,502	0/1:10,5:15:28.89:161,0,29	0/0:21,0:21:20.09:0,20,186	0/0:21,0:21:30.06:0,30,317	0/0:9,0:8:0.98:0,1,147
chr10	105440114	.	A	AT	1457.74	PASS	AB=0.944;AC=9;AF=0.161;AN=56;BaseQRankSum=-1.699;DP=670;FS=0.525;HRun=9;HaplotypeScore=86.9132;InbreedingCoeff=0.8629;MQ=61.28;MQ0=11;MQRankSum=-0.553;QD=16.20;ReadPosRankSum=-2.150;VQSLOD=3.3685;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:95.46:0,95,828	1/1:3,0:6:5.91:38,6,0	0/1:16,1:4:1.69:2,0,45	0/0:21,1:7:6.78:0,7,47	0/0:17,0:17:47.96:0,48,412	1/1:7,14:21:40.31:410,40,0	1/1:4,23:29:66.09:693,66,0	0/0:25,1:24:26.74:0,27,452	0/0:19,0:19:44.95:0,45,382	0/0:31,0:30:65.91:0,66,560	0/0:22,0:22:62.98:0,63,547	0/0:34,0:34:68.72:0,69,598	0/0:17,0:17:29.96:0,30,260	0/0:36,0:36:89.42:0,89,760	0/0:25,0:25:53.98:0,54,469	0/0:27,2:29:26.74:0,27,453	0/0:43,0:43:98.51:0,99,853	0/0:22,0:22:44.95:0,45,391	0/0:20,0:21:56.01:0,56,470	0/0:23,0:23:62.99:0,63,546	0/0:39,0:39:83.68:0,84,726	0/0:17,0:17:38.66:0,39,336	0/0:19,0:20:43.98:0,44,365	0/0:30,0:30:65.79:0,66,572	1/1:1,16:17:45.01:469,45,0	0/0:11,0:11:26.98:0,27,232	0/0:23,0:23:62.96:0,63,542	0/0:9,0:8:17.98:0,18,156
chr10	105440174	.	GGTGGATCTCT	G	641.43	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=5.383;DP=651;FS=7.350;HRun=0;HaplotypeScore=180.0782;InbreedingCoeff=0.6137;MQ=55.06;MQ0=10;MQRankSum=-5.021;QD=37.73;ReadPosRankSum=-1.098;VQSLOD=2.5923;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:93.24:0,93,4297	1/1:2,7:9:24.08:734,24,0	0/1:8,0:2:5.98:6,0,153	0/0:8,0:2:5.69:0,6,170	0/0:29,0:28:45.56:0,46,1656	0/0:20,0:20:57.18:0,57,2811	0/0:26,0:26:63.20:0,63,3093	0/0:33,0:29:51.85:0,52,1761	0/0:18,0:18:51.18:0,51,2666	0/0:29,0:28:66.18:0,66,2936	0/0:14,0:14:17.83:0,18,680	0/0:26,0:26:63.22:0,63,3208	0/0:21,0:21:57.20:0,57,2990	0/0:36,0:36:99:0,102,5277	0/0:28,0:28:78.27:0,78,3999	0/0:27,0:27:75.25:0,75,3833	0/0:31,0:31:81.28:0,81,4135	0/0:26,0:26:72.21:0,72,3519	0/0:18,0:17:48.07:0,48,1626	0/0:20,0:20:42.13:0,42,1850	0/0:51,0:49:99:0,114,5387	0/0:21,0:20:38.84:0,39,1665	0/0:18,0:18:41.79:0,42,1356	0/0:40,0:40:99:0,110,5699	0/0:18,0:18:36.10:0,36,1641	0/0:16,0:14:33.10:0,33,1483	0/0:17,0:17:51.18:0,51,2584	0/0:3,0:3:9.03:0,9,477
chr10	105440331	.	CATT	C	221.50	PASS	AB=0.667;AC=1;AF=0.018;AN=56;BaseQRankSum=4.579;DP=710;FS=1.411;HRun=0;HaplotypeScore=99.5867;InbreedingCoeff=-0.0182;MQ=72.64;MQ0=0;MQRankSum=-3.235;QD=15.82;ReadPosRankSum=0.008;VQSLOD=3.2995;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,147,3544	0/1:7,7:14:99:296,0,375	0/0:25,0:24:66.18:0,66,1385	0/0:21,0:21:35.48:0,35,834	0/0:18,0:18:54.19:0,54,1284	0/0:21,0:21:60.21:0,60,1409	0/0:22,0:22:66.21:0,66,1575	0/0:19,0:19:57.19:0,57,1339	0/0:16,0:16:48.16:0,48,1180	0/0:23,0:23:69.24:0,69,1700	0/0:15,0:15:45.15:0,45,1045	0/0:31,0:31:93.31:0,93,2220	0/0:22,0:22:66.21:0,66,1574	0/0:35,0:35:99:0,105,2585	0/0:30,0:30:90.31:0,90,2213	0/0:26,0:26:78.27:0,78,1922	0/0:51,0:51:99:0,154,3700	0/0:29,0:29:87.28:0,87,2064	0/0:36,0:36:99:0,108,2580	0/0:24,0:24:72.25:0,72,1743	0/0:37,0:37:99:0,111,2654	0/0:11,0:11:33.11:0,33,811	0/0:20,0:20:60.21:0,60,1477	0/0:37,0:37:99:0,111,2619	0/0:21,0:21:63.22:0,63,1553	0/0:21,0:21:63.16:0,63,1415	0/0:25,0:25:72.25:0,72,1773	0/0:11,0:11:33.11:0,33,815
chr10	105441161	.	A	AG	512.63	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=7.622;DP=532;FS=4.281;HRun=0;HaplotypeScore=62.9056;InbreedingCoeff=0.7802;MQ=55.97;MQ0=36;MQRankSum=1.265;QD=5.57;ReadPosRankSum=1.815;VQSLOD=3.1084;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:72.04:0,72,809	0/0:6,0:6:5.89:0,6,29	0/1:35,0:6:15.96:16,0,36	0/0:37,0:10:12.53:0,13,82	0/0:16,0:16:41.79:0,42,391	1/1:7,10:16:11.36:201,11,0	1/1:10,8:17:24.39:224,24,0	0/0:19,0:18:41.93:0,42,392	0/0:12,0:11:26.85:0,27,257	0/0:28,0:26:71.84:0,72,716	0/0:18,0:17:36.48:0,36,368	0/0:13,0:8:12.03:0,12,145	0/0:15,0:15:38.31:0,38,364	0/0:17,0:14:35.91:0,36,351	0/0:17,0:15:38.94:0,39,418	0/0:14,0:14:36:0,36,379	0/0:22,0:22:54.06:0,54,663	0/0:33,0:28:62.46:0,62,718	0/0:30,0:23:62.24:0,62,641	0/0:15,0:11:29.91:0,30,245	0/0:12,0:11:27.02:0,27,302	0/0:11,0:11:27:0,27,275	0/0:17,0:16:34.39:0,34,296	0/0:12,0:11:20.88:0,21,246	1/1:16,4:20:33.85:216,34,0	0/0:20,0:17:50.64:0,51,443	0/0:14,0:14:38.93:0,39,393	0/0:12,0:9:22.52:0,23,172
chr10	105441162	.	AG	A	565.53	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=9.065;DP=530;FS=4.593;HRun=1;HaplotypeScore=60.8713;InbreedingCoeff=0.6962;MQ=57.18;MQ0=35;MQRankSum=-2.069;QD=4.75;ReadPosRankSum=0.151;VQSLOD=0.3506;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:49.73:0,50,496	1/1:6,0:6:7.67:24,8,0	0/0:34,1:7:13.12:0,13,78	0/1:38,0:10:3.76:4,0,49	0/0:16,0:16:31.78:0,32,262	1/1:18,1:16:27.04:174,27,0	1/1:17,1:17:28.24:184,28,0	0/0:19,0:18:28.39:0,28,334	0/0:12,0:11:22:0,22,174	0/0:27,0:25:59.80:0,60,570	0/0:18,0:17:8.27:0,8,292	0/0:14,0:9:6.84:0,7,84	0/0:15,0:15:2.89:0,3,193	0/0:17,0:14:17.87:0,18,262	0/0:16,0:14:27.81:0,28,265	0/0:14,0:14:34.80:0,35,309	0/0:22,0:22:53.49:0,53,476	0/0:33,0:28:29.94:0,30,434	0/0:30,0:23:25.45:0,25,464	0/0:14,1:11:9.59:0,10,130	0/0:12,0:11:26.70:0,27,225	0/0:11,0:11:26.96:0,27,244	0/1:17,0:16:6.12:6,0,148	0/0:12,0:11:16.53:0,17,174	1/1:19,2:21:49.03:331,49,0	0/0:19,0:17:41.07:0,41,303	0/0:14,0:14:33.57:0,34,276	0/0:12,0:9:13.67:0,14,123
chr10	105442518	.	G	GA	1505.31	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-7.863;DP=651;FS=9.637;HRun=8;HaplotypeScore=64.1818;InbreedingCoeff=0.8859;MQ=68.46;MQ0=5;MQRankSum=-0.633;QD=15.85;ReadPosRankSum=-0.254;VQSLOD=2.7781;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,1:53:99:0,103,1169	0/0:7,0:7:21.01:0,21,192	0/1:26,0:16:0.91:1,0,123	0/0:25,1:18:10.09:0,10,185	0/0:20,0:20:53.96:0,54,479	1/1:2,18:20:45.13:519,45,0	1/1:6,23:29:63.19:727,63,0	0/0:22,0:22:59.92:0,60,529	0/0:16,0:16:45:0,45,406	0/0:20,0:19:50.23:0,50,441	0/0:13,0:13:30.01:0,30,274	0/0:16,0:16:42.02:0,42,384	0/0:25,0:24:54.01:0,54,494	0/0:21,0:21:54.03:0,54,494	0/0:29,0:29:78.03:0,78,714	0/0:31,0:31:81.03:0,81,741	0/0:37,0:37:99:0,100,897	0/0:32,0:31:81:0,81,728	0/0:28,0:28:65.93:0,66,589	0/0:8,0:8:23.99:0,24,214	0/0:28,0:28:65.98:0,66,592	0/0:9,0:9:21:0,21,188	0/0:19,0:19:54.02:0,54,490	0/0:36,0:36:98.98:0,99,892	1/1:2,18:20:36.07:401,36,0	0/0:22,0:22:57:0,57,516	0/0:29,0:28:81.02:0,81,736	0/0:8,0:8:21.01:0,21,192
chr10	105443398	.	TAC	T	1606.26	PASS	AB=0.901;AC=29;AF=0.518;AN=56;BaseQRankSum=9.222;DP=626;FS=0.492;HRun=0;HaplotypeScore=95.8557;InbreedingCoeff=0.0029;MQ=51.28;MQ0=15;MQRankSum=-1.161;QD=3.26;ReadPosRankSum=-0.242;VQSLOD=2.2893;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,7:40:99:130,0,255	1/1:6,0:12:3.80:46,4,0	0/1:41,0:5:0:0,0,0	0/0:34,0:5:0.47:0,0,1	0/1:19,4:23:99:119,0,389	1/1:10,0:26:30.63:147,31,0	1/1:19,0:28:8.52:42,9,0	0/1:18,6:23:42.14:73,0,42	0/0:21,1:22:3.30:0,3,422	0/1:12,2:15:43.78:44,0,312	0/0:13,0:13:18.06:0,18,270	0/1:29,2:31:37.26:37,0,585	0/1:12,1:13:8.72:9,0,289	0/1:19,2:21:27.41:27,0,454	0/1:17,0:17:15.21:15,0,208	0/0:21,1:22:8.87:0,9,555	0/0:24,1:25:12.59:0,13,711	0/1:25,4:30:99:121,0,500	1/1:8,3:11:11.87:114,12,0	1/1:13,9:25:32.21:268,32,0	1/1:20,3:24:14.86:139,15,0	0/0:12,1:13:15.50:0,16,204	0/1:17,3:20:39.47:39,0,267	0/1:26,0:26:1.92:2,0,375	1/1:10,0:16:1.19:54,1,0	0/1:22,4:25:51.41:51,0,477	1/1:10,9:21:29.74:294,30,0	0/0:4,0:3:3.01:0,3,45
chr10	105444608	.	CCCAGAGAGGCCACCGCTG	C	4820.93	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.698;DP=500;FS=0.651;HRun=0;HaplotypeScore=240.3921;InbreedingCoeff=0.9787;MQ=73.53;MQ0=0;MQRankSum=-9.827;QD=87.65;ReadPosRankSum=2.228;VQSLOD=3.9333;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.28:0,81,6608	0/0:7,0:7:15.03:0,15,1070	0/0:9,0:9:27.09:0,27,1325	0/0:10,0:10:26.30:0,26,1375	0/0:11,0:11:33.11:0,33,2671	1/1:4,8:12:24.08:1154,24,0	1/1:13,14:27:48.16:2259,48,0	0/0:20,0:20:57.19:0,57,3924	0/0:12,0:12:33.11:0,33,2296	0/0:15,0:15:39.13:0,39,2438	0/0:8,0:8:18.06:0,18,1549	0/0:19,0:19:57.20:0,57,4396	0/0:12,0:12:30.10:0,30,2095	0/0:22,0:22:63.22:0,63,5162	0/0:10,0:10:27.09:0,27,2030	0/0:8,0:8:21.07:0,21,1644	0/0:35,0:35:99:0,105,8583	0/0:38,0:38:99:0,111,8469	0/0:15,0:15:42.12:0,42,2425	0/0:7,0:7:21.07:0,21,1548	0/0:52,0:52:99:0,151,10782	0/0:8,0:8:21.07:0,21,1254	0/0:9,0:9:24.08:0,24,1342	0/0:30,0:30:81.26:0,81,6301	1/1:10,6:16:33.11:1408,33,0	0/0:25,0:25:75.26:0,75,5311	0/0:26,0:26:72.23:0,72,5587	0/0:7,0:7:15.05:0,15,1313
chr10	105444616	.	GGC	G	530.89	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.713;DP=478;FS=0.661;HRun=0;HaplotypeScore=82.7095;InbreedingCoeff=0.9749;MQ=75.45;MQ0=0;MQRankSum=-9.688;QD=13.61;ReadPosRankSum=3.712;VQSLOD=3.4115;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.29:0,93,1770	0/0:4,0:4:12.04:0,12,244	0/0:11,0:11:33.04:0,33,567	0/0:9,0:9:27.09:0,27,527	0/0:12,0:12:33.11:0,33,645	1/1:9,1:10:22.90:138,23,0	1/1:14,2:16:43.42:269,43,0	0/0:22,0:22:66.22:0,66,1290	0/0:13,0:13:36.12:0,36,679	0/0:16,0:16:45.14:0,45,841	0/0:6,0:6:18.06:0,18,366	0/0:20,0:20:60.19:0,60,1169	0/0:8,0:8:24.08:0,24,487	0/0:21,0:21:63.22:0,63,1278	0/0:9,0:9:27.09:0,27,548	0/0:8,0:8:24.08:0,24,487	0/0:38,0:38:99:0,114,2278	0/0:35,0:35:99:0,105,2103	0/0:15,0:15:38.94:0,39,745	0/0:9,0:9:27.08:0,27,480	0/0:53,0:53:99:0,157,3042	0/0:8,0:8:24.08:0,24,458	0/0:7,0:7:21.07:0,21,396	0/0:27,0:27:81.28:0,81,1634	1/1:8,5:13:31.99:266,32,0	0/0:26,0:26:78.26:0,78,1527	0/0:25,0:25:75.26:0,75,1508	0/0:5,0:5:15.05:0,15,304
chr10	105444622	.	C	CA	194.08	PASS	AB=0.840;AC=3;AF=0.054;AN=56;BaseQRankSum=5.732;DP=489;FS=4.095;HRun=0;HaplotypeScore=81.1930;InbreedingCoeff=0.0740;MQ=77.64;MQ0=0;MQRankSum=-4.784;QD=4.98;ReadPosRankSum=1.268;VQSLOD=3.0787;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.30:0,90,1256	0/0:4,0:4:12.04:0,12,167	0/0:12,0:12:26.46:0,26,401	0/0:11,0:11:24.55:0,25,318	0/0:13,0:13:36.03:0,36,477	0/1:9,1:10:21.14:21,0,30	0/1:14,2:16:44.86:98,0,45	0/0:22,0:22:63.17:0,63,858	0/0:12,0:12:36.09:0,36,468	0/0:19,0:19:51.07:0,51,648	0/0:7,0:7:18.06:0,18,251	0/0:20,0:20:57.19:0,57,796	0/0:9,0:9:26.98:0,27,351	0/0:22,0:22:63.21:0,63,877	0/0:9,0:9:27.08:0,27,360	0/0:8,0:8:24.07:0,24,318	0/0:39,0:39:99:0,114,1573	0/0:39,0:39:99:0,108,1506	0/0:13,0:13:32.95:0,33,424	0/0:9,0:9:24.08:0,24,334	0/0:53,0:53:99:0,153,2055	0/0:10,0:10:21.01:0,21,254	0/0:6,0:6:12:0,12,145	0/0:27,0:27:78.22:0,78,1062	0/1:8,5:13:5.48:174,0,5	0/0:25,0:25:69.08:0,69,867	0/0:23,0:23:69.23:0,69,953	0/0:5,0:5:15.05:0,15,209
chr10	105444626	.	G	GT	257.22	PASS	AB=0.881;AC=4;AF=0.071;AN=56;BaseQRankSum=6.653;DP=489;FS=2.134;HRun=1;HaplotypeScore=87.6383;InbreedingCoeff=0.1119;MQ=74.90;MQ0=0;MQRankSum=-5.748;QD=4.59;ReadPosRankSum=0.560;VQSLOD=0.4807;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.31:0,93,1299	0/0:4,0:4:12.04:0,12,168	0/1:11,0:11:2.04:2,0,298	0/0:8,0:8:21.54:0,22,279	0/0:15,0:15:39.11:0,39,527	0/1:9,1:10:18.43:18,0,30	0/1:19,2:21:41.28:152,0,41	0/0:19,0:19:57.17:0,57,779	0/0:12,0:12:36.12:0,36,502	0/0:16,0:16:42.13:0,42,566	0/0:7,0:7:21.07:0,21,291	0/0:20,0:20:60.20:0,60,839	0/0:9,0:9:24.08:0,24,332	0/0:20,0:20:60.20:0,60,828	0/0:10,0:10:30.08:0,30,400	0/0:9,0:9:24.06:0,24,318	0/0:39,0:39:99:0,117,1632	0/0:40,0:40:99:0,120,1634	0/0:14,0:14:38.83:0,39,527	0/0:10,0:10:30.10:0,30,418	0/0:55,0:55:99:0,159,2169	0/0:9,0:9:27.09:0,27,375	0/0:6,0:6:18.06:0,18,252	0/0:27,0:27:81.24:0,81,1112	0/1:8,6:14:2.48:186,0,2	0/0:24,0:24:66.22:0,66,922	0/0:23,0:23:66.19:0,66,902	0/0:5,0:5:15.05:0,15,210
chr10	105449889	.	ACC	A	501.95	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.194;DP=664;FS=0.000;HRun=3;HaplotypeScore=77.1267;InbreedingCoeff=0.9917;MQ=76.15;MQ0=0;MQRankSum=-2.359;QD=38.61;ReadPosRankSum=1.584;VQSLOD=3.2896;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,138,2431	1/1:0,13:13:39.13:597,39,0	0/0:21,0:18:48.02:0,48,839	0/0:32,1:29:78.26:0,78,1473	0/0:26,0:26:75.24:0,75,1447	0/0:20,0:20:60.19:0,60,1114	0/0:40,0:40:99:0,117,2175	0/0:23,0:23:69.17:0,69,1288	0/0:29,0:29:87.30:0,87,1669	0/0:22,0:22:63.22:0,63,1217	0/0:7,0:7:18.05:0,18,311	0/0:22,0:22:66.23:0,66,1274	0/0:17,0:17:48.12:0,48,880	0/0:25,0:25:75.26:0,75,1434	0/0:30,0:30:84.29:0,84,1622	0/0:17,0:17:51.17:0,51,985	0/0:27,0:27:78.26:0,78,1467	0/0:27,0:27:81.26:0,81,1531	0/0:19,0:18:54.17:0,54,967	0/0:12,0:12:36.12:0,36,693	0/0:42,0:42:99:0,126,2411	0/0:21,0:21:54.18:0,54,1002	0/0:14,0:14:42.14:0,42,811	0/0:42,0:42:99:0,123,2354	0/0:14,0:14:42.13:0,42,779	0/0:21,0:21:60.20:0,60,1108	0/0:18,0:18:51.16:0,51,953	0/0:13,0:13:36.12:0,36,667
chr10	105450017	.	GCA	G	150.82	PASS	AB=0.963;AC=14;AF=0.292;AN=48;BaseQRankSum=4.291;DP=573;FS=3.332;HRun=0;HaplotypeScore=81.0554;InbreedingCoeff=-0.1265;MQ=58.88;MQ0=9;MQRankSum=0.462;QD=0.60;ReadPosRankSum=2.063;VQSLOD=0.7965;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:15.02:0,15,179	0/0:6,0:6:4.07:0,4,12	./.	./.	0/1:17,1:18:16.88:17,0,120	1/1:8,0:11:5.64:27,6,0	./.	0/0:13,0:13:0.89:0,1,2	0/1:22,0:22:11.20:11,0,117	0/0:18,0:18:13.63:0,14,182	0/0:12,0:12:3.01:0,3,43	0/1:14,0:13:32.45:50,0,32	0/0:15,0:16:6.75:0,7,56	0/0:22,0:22:21.07:0,21,303	0/0:22,0:27:6.01:0,6,70	0/1:22,0:22:25.96:26,0,310	0/1:21,2:22:16.87:17,0,135	0/1:21,1:22:44.69:45,0,85	0/0:14,0:14:8.99:0,9,100	./.	0/1:46,3:49:66.37:66,0,257	0/1:19,0:20:2.10:2,0,98	0/1:16,0:17:10.13:10,0,45	0/0:44,0:44:27.66:0,28,294	1/1:10,0:13:1.82:5,2,0	0/0:24,0:24:2.80:0,3,7	0/1:21,0:20:5.60:6,0,159	0/0:6,0:6:8.99:0,9,108
chr10	105450353	.	AT	A	83.24	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.301;DP=495;FS=4.479;HRun=8;HaplotypeScore=50.1446;InbreedingCoeff=0.9430;MQ=70.65;MQ0=1;MQRankSum=-1.763;QD=13.87;ReadPosRankSum=0.111;VQSLOD=3.0406;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:75.23:0,75,905	1/1:0,6:6:18.03:174,18,0	0/0:10,0:10:20.63:0,21,196	0/0:12,0:9:12.44:0,12,135	0/0:25,0:25:72.14:0,72,837	0/0:19,0:19:57.16:0,57,675	0/0:13,0:13:36.10:0,36,424	0/0:22,0:22:54.17:0,54,652	0/0:15,0:15:45.14:0,45,543	0/0:22,1:23:34.18:0,34,680	0/0:13,0:13:29.96:0,30,341	0/0:13,0:13:30.09:0,30,362	0/0:12,0:12:33.10:0,33,399	0/0:10,0:10:27.08:0,27,326	0/0:21,0:21:57.15:0,57,668	0/0:16,0:16:39.11:0,39,461	0/0:29,0:29:81.25:0,81,979	0/0:19,0:19:54.17:0,54,651	0/0:16,1:18:22:0,22,503	0/0:22,0:22:66.20:0,66,797	0/0:13,0:13:36.10:0,36,424	0/0:16,1:17:16.16:0,16,478	0/0:18,0:18:45.14:0,45,538	0/0:13,0:13:33.10:0,33,399	0/0:22,0:22:57.17:0,57,688	0/0:24,0:24:63.19:0,63,758	0/0:29,0:29:87.26:0,87,1044	0/0:12,0:12:33.95:0,34,376
chr10	105450390	.	G	GAA	141.01	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.018;DP=486;FS=0.000;HRun=8;HaplotypeScore=57.4840;InbreedingCoeff=0.9488;MQ=68.50;MQ0=0;MQRankSum=-2.036;QD=28.20;ReadPosRankSum=-1.662;VQSLOD=2.9592;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:72.17:0,72,803	1/1:0,5:5:15.05:229,15,0	0/0:7,0:5:15.04:0,15,166	0/0:7,0:6:15.38:0,15,146	0/0:25,0:25:69.18:0,69,769	0/0:20,0:20:57.15:0,57,635	0/0:14,0:14:39.08:0,39,424	0/0:22,0:22:50.25:0,50,560	0/0:16,0:16:42.10:0,42,468	0/0:24,0:24:66.18:0,66,736	0/0:21,0:21:54.10:0,54,592	0/0:15,0:15:39.10:0,39,435	0/0:9,0:9:27.06:0,27,292	0/0:14,0:14:39.09:0,39,426	0/0:13,0:13:39.09:0,39,425	0/0:14,0:14:39.07:0,39,417	0/0:33,0:33:93.22:0,93,1026	0/0:26,0:26:66.17:0,66,736	0/0:17,0:17:42.11:0,42,468	0/0:18,0:18:42.11:0,42,468	0/0:14,0:14:39.11:0,39,434	0/0:18,0:18:48.13:0,48,535	0/0:11,0:11:30.08:0,30,334	0/0:17,0:17:45.12:0,45,501	0/0:15,0:15:39.10:0,39,435	0/0:22,0:22:57.12:0,57,626	0/0:31,0:31:87.23:0,87,970	0/0:9,0:9:21.05:0,21,234
chr10	105450896	.	T	TGTGTGTGTGTGTGC	303.90	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=1.131;DP=733;FS=3.111;HRun=0;HaplotypeScore=258.8690;InbreedingCoeff=0.5805;MQ=56.46;MQ0=14;MQRankSum=-2.010;QD=10.13;ReadPosRankSum=-1.002;VQSLOD=2.0066;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,137,3595	1/1:0,10:13:6.28:383,6,0	0/0:39,0:16:27.10:0,27,385	0/0:48,0:17:26.06:0,26,290	0/0:17,0:17:47.57:0,48,1237	0/0:26,0:26:66.11:0,66,1919	0/0:22,0:22:65.54:0,66,1326	0/0:19,0:19:39.25:0,39,654	0/0:23,0:23:62.41:0,62,1455	0/0:30,0:29:84.02:0,84,2152	0/0:16,0:16:47.32:0,47,1175	0/0:27,0:27:77.87:0,78,1983	0/0:16,0:16:48.03:0,48,1496	0/0:20,0:20:57.04:0,57,1226	0/0:30,0:30:90.14:0,90,2451	0/0:29,0:29:87.09:0,87,2222	0/0:29,0:29:52.76:0,53,1660	0/0:32,0:32:93.19:0,93,2658	0/1:17,0:11:8.64:9,0,447	0/0:20,0:19:45.08:0,45,1310	0/0:42,0:42:99:0,118,3104	0/0:16,0:16:30.41:0,30,259	0/0:24,0:24:63.15:0,63,1991	0/0:55,0:54:99:0,153,4408	0/0:14,0:14:39.11:0,39,1330	0/0:21,0:21:60.01:0,60,1579	0/0:15,0:15:42.06:0,42,1097	0/0:15,0:15:43.89:0,44,820
chr10	105451334	.	TCA	T	81.58	PASS	AB=0.948;AC=15;AF=0.288;AN=52;BaseQRankSum=3.718;DP=526;FS=2.540;HRun=0;HaplotypeScore=68.7920;InbreedingCoeff=0.0044;MQ=64.70;MQ0=8;MQRankSum=0.272;QD=0.38;ReadPosRankSum=1.026;VQSLOD=1.4538;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,1:22:24.56:25,0,139	0/0:8,0:8:5.92:0,6,39	./.	./.	0/1:16,0:16:16.46:16,0,100	0/0:14,0:14:12.04:0,12,177	0/0:23,0:23:24.06:0,24,331	0/0:21,0:21:2.98:0,3,21	0/0:28,0:28:20.87:0,21,239	0/0:16,0:16:11.92:0,12,115	0/0:10,0:9:12.04:0,12,172	0/0:23,0:23:8.78:0,9,131	0/1:19,1:20:20.12:20,0,113	0/0:15,0:15:18.04:0,18,239	0/1:18,0:19:2.10:2,0,101	0/1:20,0:20:3.54:4,0,182	0/1:30,3:33:30.76:31,0,322	0/1:19,0:19:13.70:14,0,157	1/1:13,0:13:3.01:32,3,0	0/0:9,0:9:9.03:0,9,133	0/0:25,0:25:11.84:0,12,232	0/1:16,1:17:17.13:17,0,141	0/0:17,0:17:3.01:0,3,41	0/0:31,0:31:30.03:0,30,359	0/1:9,3:13:23.11:23,0,61	1/1:12,0:12:2.84:14,3,0	0/0:17,0:17:14.06:0,14,161	1/1:7,0:9:5.68:28,6,0
chr10	105454775	.	AAGAG	A	1539.79	PASS	AB=0.923;AC=37;AF=0.712;AN=52;BaseQRankSum=1.187;DP=486;FS=2.173;HRun=0;HaplotypeScore=83.8864;InbreedingCoeff=0.2149;MQ=50.30;MQ0=54;MQRankSum=-1.175;QD=4.39;ReadPosRankSum=0.036;VQSLOD=1.6367;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:31:21.01:249,21,0	0/0:7,0:6:2.92:0,3,17	./.	0/0:41,0:6:0:0,0,0	1/1:15,0:14:6.02:91,6,0	1/1:9,0:12:9.01:84,9,0	1/1:10,0:10:6.01:63,6,0	./.	1/1:10,0:10:9.03:136,9,0	0/0:16,0:15:12.03:0,12,153	0/1:19,0:18:0.67:1,0,63	1/1:4,0:7:3:28,3,0	1/1:5,4:8:6.02:85,6,0	0/1:5,0:6:3.35:47,0,3	1/1:10,0:10:3.01:46,3,0	0/1:12,1:14:49.77:75,0,50	1/1:29,1:27:30.09:408,30,0	0/1:15,0:21:20.67:22,0,21	1/1:12,0:12:8.91:71,9,0	1/1:12,0:11:3.01:31,3,0	0/1:17,0:14:0.10:0,0,0	1/1:14,7:20:3.01:39,3,0	1/1:15,7:22:3.01:46,3,0	0/1:18,0:16:9.96:44,0,10	1/1:16,0:19:3:28,3,0	0/1:13,0:11:0.34:0,0,171	1/1:6,0:10:8.87:84,9,0	0/0:9,0:6:5.66:0,6,33
chr10	105454832	.	AAAAAGAAAAG	A	723.41	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=5.261;DP=543;FS=8.642;HRun=0;HaplotypeScore=149.0706;InbreedingCoeff=0.9075;MQ=50.09;MQ0=26;MQRankSum=-5.361;QD=12.92;ReadPosRankSum=-1.658;VQSLOD=1.9476;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:60.21:0,60,2576	1/1:3,3:6:6.02:137,6,0	./.	./.	0/0:12,0:11:21.07:0,21,771	1/1:9,6:15:15.05:244,15,0	1/1:13,0:13:8.99:97,9,0	0/0:19,0:16:9:0,9,140	0/0:16,0:16:27.08:0,27,1174	0/0:21,0:20:36.10:0,36,1662	0/0:14,0:14:24.08:0,24,1065	0/0:11,0:11:21.07:0,21,951	0/0:11,0:10:12.04:0,12,471	0/0:9,0:9:12.04:0,12,549	0/0:11,0:11:21.07:0,21,872	0/0:17,0:16:27.08:0,27,1083	0/0:30,0:28:42.09:0,42,1694	0/0:31,0:29:51.18:0,51,2254	0/0:20,0:19:27.08:0,27,986	0/0:26,0:25:54.19:0,54,2254	0/0:14,0:14:27.08:0,27,1042	0/0:16,0:16:24.08:0,24,1059	0/0:19,0:19:27.09:0,27,1188	0/0:18,0:17:36.12:0,36,1589	1/1:11,11:22:24.08:390,24,0	0/0:24,0:22:36.11:0,36,1173	0/0:19,0:19:36.59:0,37,1502	0/0:15,0:11:24.08:0,24,1161
chr10	105456900	.	GT	G	110.82	PASS	AB=0.756;AC=2;AF=0.036;AN=56;BaseQRankSum=4.798;DP=556;FS=3.015;HRun=10;HaplotypeScore=57.7203;InbreedingCoeff=0.0713;MQ=69.61;MQ0=2;MQRankSum=1.594;QD=3.46;ReadPosRankSum=-0.730;VQSLOD=-0.7188;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,3:25:8.06:0,8,545	0/1:2,8:10:6.19:181,0,6	0/1:21,1:14:15.77:16,0,77	0/0:19,1:16:6.99:0,7,154	0/0:25,0:25:60.14:0,60,647	0/0:18,0:18:38.09:0,38,389	0/0:24,0:24:66.18:0,66,730	0/0:27,0:27:54.58:0,55,574	0/0:16,0:16:39.11:0,39,431	0/0:21,0:21:51.13:0,51,556	0/0:16,1:17:16.05:0,16,395	0/0:18,0:18:48.08:0,48,509	0/0:14,1:15:7.09:0,7,297	0/0:16,1:18:15.89:0,16,378	0/0:18,0:19:44.93:0,45,463	0/0:17,1:20:21.90:0,22,444	0/0:24,0:24:34.18:0,34,591	0/0:21,1:22:60.15:0,60,654	0/0:19,0:19:42.11:0,42,464	0/0:23,0:23:53.47:0,53,559	0/0:14,0:13:21.06:0,21,232	0/0:19,0:19:48.12:0,48,523	0/0:19,0:19:36.10:0,36,396	0/0:22,0:22:60.14:0,60,654	0/0:11,1:12:0.97:0,1,218	0/0:33,0:33:81.15:0,81,864	0/0:21,0:21:54.13:0,54,589	0/0:13,0:13:30.08:0,30,329
chr10	105458855	.	CTTCTTT	C	273.55	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.792;DP=497;FS=2.516;HRun=0;HaplotypeScore=96.1554;InbreedingCoeff=0.7772;MQ=69.68;MQ0=3;MQRankSum=-0.823;QD=39.08;ReadPosRankSum=-1.103;VQSLOD=2.8941;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:69.03:0,69,1524	1/1:0,7:7:17.99:364,18,0	0/0:31,0:19:11.77:0,12,390	0/0:17,0:6:1.38:0,1,122	0/0:26,0:26:75.10:0,75,1460	0/0:23,0:22:60.16:0,60,1678	0/0:15,0:15:44.08:0,44,878	0/0:17,0:17:46.64:0,47,997	0/0:19,0:19:42:0,42,716	0/0:16,0:16:48.06:0,48,1051	0/0:17,0:17:51.02:0,51,1186	0/0:15,0:15:45:0,45,884	0/0:14,0:14:35.97:0,36,950	0/0:18,0:18:33.04:0,33,809	0/0:18,0:18:48.11:0,48,1246	0/0:22,0:22:60.04:0,60,1188	0/0:18,0:18:34.91:0,35,1130	0/0:16,0:15:39.03:0,39,921	0/0:12,0:11:31.29:0,31,759	0/0:13,0:13:39.06:0,39,823	0/0:5,0:5:15.02:0,15,339	0/0:15,0:15:42.07:0,42,899	0/0:19,0:19:54.13:0,54,1319	0/0:16,0:16:42.08:0,42,887	0/0:16,0:16:39.01:0,39,978	0/0:31,0:31:76.22:0,76,1882	0/0:21,0:21:55.37:0,55,1530	0/0:12,0:12:35.99:0,36,734
chr10	105459066	.	CGT	C	570.29	PASS	AB=0.912;AC=22;AF=0.423;AN=52;BaseQRankSum=7.244;DP=564;FS=5.367;HRun=0;HaplotypeScore=75.7914;InbreedingCoeff=-0.1607;MQ=66.30;MQ0=14;MQRankSum=-0.405;QD=1.46;ReadPosRankSum=2.601;VQSLOD=1.1261;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:29:14.20:70,14,0	0/0:9,0:9:6.01:0,6,70	./.	./.	0/1:12,1:12:20.21:20,0,80	0/1:17,1:18:23.23:23,0,50	0/1:24,4:29:86.77:87,0,129	0/0:25,0:22:5.98:0,6,58	0/1:24,1:25:14.08:14,0,361	0/0:11,0:11:8.97:0,9,76	0/0:18,0:17:21.03:0,21,251	0/1:16,4:20:17.23:17,0,118	1/1:6,4:11:8.86:78,9,0	0/1:15,1:16:24.35:24,0,107	0/1:23,0:23:33.59:34,0,262	0/1:24,4:28:54.66:55,0,372	1/1:19,0:29:19.89:98,20,0	1/1:10,0:14:17.04:84,17,0	0/0:21,0:18:3.01:0,3,44	0/1:13,0:13:11.05:11,0,55	0/1:56,0:55:6.79:7,0,346	0/1:11,3:14:17.47:17,0,139	0/1:8,1:9:9.97:26,0,10	0/1:22,4:25:11.29:11,0,243	0/1:12,2:15:57.59:58,0,136	0/0:20,0:19:27.01:0,27,317	0/0:9,0:7:6.01:0,6,69	0/0:11,0:11:9.50:0,10,134
chr10	105463578	.	TC	T	294.41	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.748;DP=731;FS=1.144;HRun=2;HaplotypeScore=68.9340;InbreedingCoeff=0.9991;MQ=87.78;MQ0=0;MQRankSum=-1.653;QD=24.53;ReadPosRankSum=-0.544;VQSLOD=3.2703;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,154,2270	1/1:0,12:12:30.10:389,30,0	0/0:21,0:21:51.18:0,51,859	0/0:30,0:30:72.48:0,72,1016	0/0:29,0:29:84.25:0,84,1217	0/0:16,0:16:48.16:0,48,719	0/0:24,0:24:69.23:0,69,1034	0/0:28,0:28:81.27:0,81,1196	0/0:23,0:23:66.22:0,66,988	0/0:33,0:33:90.30:0,90,1347	0/0:13,0:13:36.12:0,36,536	0/0:23,0:23:66.22:0,66,988	0/0:28,0:28:84.28:0,84,1244	0/0:25,0:25:75.25:0,75,1110	0/0:31,0:31:93.30:0,93,1374	0/0:28,0:28:81.27:0,81,1211	0/0:42,0:42:99:0,126,1885	0/0:35,0:35:99:0,105,1569	0/0:15,0:15:45.14:0,45,656	0/0:19,0:19:57.19:0,57,850	0/0:40,0:40:99:0,117,1729	0/0:24,0:24:72.24:0,72,1077	0/0:20,0:20:60.19:0,60,879	0/0:28,0:28:84.28:0,84,1257	0/0:20,0:20:57.17:0,57,830	0/0:39,0:39:99:0,117,1708	0/0:20,0:20:60.20:0,60,894	0/0:11,0:11:33.11:0,33,492
chr10	105463940	.	AAGAT	A	241.41	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.092;DP=580;FS=3.299;HRun=0;HaplotypeScore=91.7407;InbreedingCoeff=0.8583;MQ=70.35;MQ0=0;MQRankSum=-2.217;QD=34.49;ReadPosRankSum=-0.342;VQSLOD=3.2871;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,3316	1/1:0,7:7:18.06:332,18,0	0/0:17,0:17:15.53:0,16,967	0/0:3,0:3:5.81:0,6,54	0/0:23,0:23:60.21:0,60,1544	0/0:19,0:19:54.19:0,54,1405	0/0:25,0:25:72.25:0,72,1821	0/0:35,0:35:99:0,102,2451	0/0:26,0:26:78.15:0,78,1795	0/0:19,0:19:54.19:0,54,1403	0/0:13,0:13:39.12:0,39,973	0/0:25,0:25:72.23:0,72,1777	0/0:24,0:24:72.25:0,72,1812	0/0:17,0:17:45.15:0,45,1196	0/0:26,0:26:78.24:0,78,1858	0/0:19,0:19:51.17:0,51,1302	0/0:26,0:26:78.25:0,78,1948	0/0:20,0:20:51.17:0,51,1313	0/0:27,0:27:81.25:0,81,1967	0/0:13,0:13:39.13:0,39,1002	0/0:23,0:23:60.21:0,60,1587	0/0:18,0:18:54.19:0,54,1370	0/0:18,0:18:51.16:0,51,1270	0/0:27,0:27:72.23:0,72,1827	0/0:17,0:16:51.18:0,51,1355	0/0:25,0:25:75.24:0,75,1890	0/0:20,0:20:48.15:0,48,1187	0/0:4,0:4:12.04:0,12,308
chr10	105464825	.	AC	A	68.23	PASS	AB=0.571;AC=1;AF=0.018;AN=56;BaseQRankSum=2.788;DP=678;FS=7.361;HRun=6;HaplotypeScore=65.5766;InbreedingCoeff=-0.0061;MQ=91.86;MQ0=0;MQRankSum=-1.442;QD=8.53;ReadPosRankSum=0.286;VQSLOD=0.3021;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,156,2006	0/1:2,6:8:22.15:143,0,22	0/0:30,0:30:75.20:0,75,925	0/0:26,0:26:71.66:0,72,883	0/0:37,0:36:99:0,108,1392	0/0:22,0:22:60.17:0,60,762	0/0:27,0:27:81.22:0,81,1020	0/0:23,0:23:60.20:0,60,789	0/0:18,0:18:54.16:0,54,685	0/0:33,0:33:96.30:0,96,1235	0/0:14,0:14:39.13:0,39,512	0/0:16,0:16:45.15:0,45,592	0/0:13,0:13:39.13:0,39,513	0/0:18,0:18:51.17:0,51,670	0/0:20,0:20:51.16:0,51,658	0/0:20,0:20:60.16:0,60,747	0/0:47,0:47:99:0,135,1762	0/0:20,0:20:57.19:0,57,750	0/0:24,0:24:66.19:0,66,841	0/0:20,0:20:57.19:0,57,748	0/0:36,0:36:99:0,105,1379	0/0:29,0:29:84.26:0,84,1089	0/0:15,0:15:42.14:0,42,550	0/0:26,0:26:75.17:0,75,948	0/0:23,0:23:69.22:0,69,907	0/0:29,0:29:87.28:0,87,1142	0/0:19,0:18:54.18:0,54,710	0/0:10,0:10:30.10:0,30,395
chr10	105465940	.	T	TTTTCTTTC	1549.14	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=-2.817;DP=554;FS=1.062;HRun=0;HaplotypeScore=132.1928;InbreedingCoeff=0.8067;MQ=62.46;MQ0=2;MQRankSum=-4.927;QD=18.66;ReadPosRankSum=-3.584;VQSLOD=1.8662;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:43.03:0,43,914	1/1:2,0:8:3.48:105,3,0	1/1:20,0:8:0.47:1,0,0	./.	0/0:14,0:14:24.06:0,24,470	1/1:5,7:13:9.03:367,9,0	1/1:10,5:18:0.43:118,0,0	0/0:39,0:39:24.07:0,24,311	0/0:6,0:18:24.08:0,24,436	0/0:28,0:28:45.15:0,45,1054	0/0:16,0:16:30.10:0,30,736	0/0:21,0:21:42.13:0,42,962	0/0:13,0:13:18.06:0,18,391	0/0:9,0:9:27.09:0,27,649	0/0:23,0:23:45.11:0,45,869	0/0:17,0:17:27.09:0,27,672	0/0:27,0:27:48.10:0,48,1041	0/0:29,0:29:60.19:0,60,1400	0/0:7,0:13:17.27:0,17,274	0/0:13,0:13:12.04:0,12,299	0/0:20,0:20:36.09:0,36,773	0/0:16,0:16:27.07:0,27,573	0/0:19,0:19:39.12:0,39,922	0/0:27,0:27:39.12:0,39,850	1/1:6,12:24:27.09:1090,27,0	0/0:33,0:33:63.69:0,64,1551	0/0:17,0:17:36.12:0,36,832	0/0:20,0:19:21.05:0,21,438
chr10	105466737	.	G	GGA	687.20	PASS	AB=0.904;AC=18;AF=0.333;AN=54;BaseQRankSum=1.846;DP=503;FS=9.022;HRun=0;HaplotypeScore=99.6971;InbreedingCoeff=0.4563;MQ=57.48;MQ0=7;MQRankSum=-3.800;QD=3.23;ReadPosRankSum=-0.273;VQSLOD=1.6748;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:29.55:0,30,270	1/1:3,0:3:8.74:62,9,0	./.	0/1:21,0:8:0:0,0,0	0/0:17,1:18:2.68:0,3,17	1/1:16,0:16:14.95:131,15,0	1/1:41,0:40:23.71:195,24,0	1/1:20,0:20:6.01:61,6,0	0/0:19,0:22:26.38:0,26,200	0/0:14,0:14:5.93:0,6,48	0/0:9,0:9:11.90:0,12,114	0/0:13,0:16:26.46:0,26,216	0/0:23,0:24:31.20:0,31,244	0/0:18,0:18:19.27:0,19,185	0/0:22,0:21:32.11:0,32,259	0/0:17,0:17:32.84:0,33,315	0/0:20,0:21:29.70:0,30,273	1/1:7,8:15:12.04:180,12,0	0/1:10,3:13:18.10:101,0,18	0/1:7,2:9:24.11:24,0,39	0/1:25,8:34:27.01:39,0,27	0/0:8,0:7:2.54:0,3,33	0/1:9,0:9:0:0,0,0	0/0:21,0:25:35.92:0,36,367	1/1:15,0:15:3:26,3,0	0/0:18,0:18:5.53:0,6,46	0/1:16,0:15:24.57:36,0,25	0/0:12,0:10:17.86:0,18,167
chr10	105466764	.	G	GAGAGAGAA	452.15	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=3.930;DP=574;FS=15.947;HRun=0;HaplotypeScore=149.9631;InbreedingCoeff=0.2603;MQ=59.07;MQ0=14;MQRankSum=-5.046;QD=6.37;ReadPosRankSum=-1.224;VQSLOD=1.5848;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:68.82:0,69,1089	1/1:0,4:4:8.90:270,9,0	0/0:22,0:9:17.90:0,18,152	0/0:40,0:20:39.44:0,39,357	0/0:14,0:14:5.16:0,5,94	0/1:14,0:14:93.27:178,0,93	0/1:41,0:40:59.31:59,0,361	0/0:24,0:24:41.40:0,41,460	0/0:24,0:24:56.59:0,57,816	0/0:19,0:18:41.92:0,42,459	0/0:13,0:13:21.02:0,21,364	0/0:19,0:19:50.66:0,51,800	0/0:24,0:24:56.98:0,57,898	0/0:15,0:15:30.03:0,30,526	0/0:26,0:25:63.04:0,63,971	0/0:24,0:23:69.06:0,69,1163	0/0:18,0:18:39.42:0,39,810	0/0:21,0:21:32.86:0,33,258	0/0:17,0:17:35.74:0,36,339	0/0:12,0:11:8.77:0,9,248	0/0:40,0:40:56.13:0,56,510	0/0:11,0:10:11.11:0,11,145	0/0:11,0:10:17.76:0,18,147	0/0:27,0:27:62.62:0,63,1173	0/1:12,0:11:61.87:62,0,83	0/0:15,0:15:36.85:0,37,399	0/0:16,0:15:32.91:0,33,316	0/0:21,0:20:47.80:0,48,691
chr10	105467067	.	CTG	C	526.23	PASS	AB=0.991;AC=30;AF=0.600;AN=50;BaseQRankSum=6.357;DP=660;FS=2.519;HRun=0;HaplotypeScore=104.6886;InbreedingCoeff=-0.1255;MQ=62.36;MQ0=14;MQRankSum=1.535;QD=1.02;ReadPosRankSum=-1.297;VQSLOD=1.5764;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:38:5.39:25,5,0	0/0:9,0:9:8.08:0,8,44	./.	./.	0/0:18,0:18:2.95:0,3,93	1/1:10,0:10:2.49:9,2,0	1/1:25,1:25:2.63:29,3,0	0/0:24,0:23:8.99:0,9,94	0/1:26,0:24:31.66:32,0,49	0/1:17,0:17:11.73:12,0,34	1/1:25,0:25:13.29:58,13,0	0/1:36,1:37:45.02:77,0,45	0/1:17,1:18:37.20:37,0,45	0/0:16,0:16:8.76:0,9,106	0/1:27,1:26:42.79:43,0,46	0/1:30,0:30:29.98:80,0,30	1/1:24,0:23:3.65:28,4,0	0/1:13,0:13:7.45:34,0,7	./.	1/1:10,0:10:2.50:9,2,0	0/1:50,0:48:0.13:0,0,119	0/1:18,0:17:6.13:6,0,61	1/1:19,0:18:5.90:41,6,0	0/1:36,0:36:11.33:24,0,11	1/1:20,0:20:5.06:24,5,0	0/1:29,0:28:14.80:47,0,15	0/1:12,0:12:24.80:25,0,36	1/1:24,0:21:5.97:34,6,0
chr10	105467107	.	GTGTGT	G	2528.36	PASS	AB=0.932;AC=29;AF=0.518;AN=56;BaseQRankSum=3.065;DP=709;FS=3.502;HRun=0;HaplotypeScore=96.8401;InbreedingCoeff=-0.1702;MQ=48.49;MQ0=114;MQRankSum=-1.078;QD=5.16;ReadPosRankSum=6.541;VQSLOD=1.2024;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,2:21:4.69:60,0,5	0/1:11,0:10:48.83:131,0,49	0/0:54,0:20:59.49:0,59,674	0/0:61,0:22:60.55:0,61,684	0/0:17,1:16:7.27:0,7,100	1/1:12,1:12:1.24:3,1,0	1/1:33,3:28:6.86:98,7,0	0/1:31,0:17:54.04:397,0,54	0/1:17,1:14:52.43:71,0,52	0/1:19,0:17:38.68:124,0,39	1/1:19,2:16:9.75:137,10,0	0/1:16,15:26:58.28:148,0,58	0/1:10,1:11:50.59:83,0,51	0/0:22,1:20:8.82:0,9,111	0/1:28,2:23:51.02:104,0,51	0/1:23,3:23:41.14:151,0,41	0/1:22,1:21:5.16:5,0,23	0/1:16,1:15:20.42:160,0,20	1/1:13,0:9:21.02:247,21,0	1/1:15,0:11:1.82:5,2,0	0/0:39,1:30:9.66:0,10,129	0/0:21,1:18:2.52:0,3,66	1/1:7,14:16:5.21:126,5,0	0/1:30,2:28:11.02:118,0,11	1/1:13,12:18:4.11:66,4,0	0/1:27,2:25:12.58:268,0,13	0/1:13,2:11:74.58:184,0,75	0/1:17,0:11:6.88:7,0,22
chr10	105467109	.	GTGT	G	4649.56	PASS	AB=0.600;AC=51;AF=0.911;AN=56;BaseQRankSum=-0.844;DP=684;FS=3.069;HRun=0;HaplotypeScore=79.2686;InbreedingCoeff=0.4668;MQ=49.04;MQ0=112;MQRankSum=-2.424;QD=8.16;ReadPosRankSum=4.381;VQSLOD=3.4315;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,15:21:4.33:76,4,0	1/1:11,0:10:17.23:169,17,0	0/0:54,0:21:62.50:0,62,711	0/0:60,0:22:60.08:0,60,681	1/1:4,15:17:3.01:48,3,0	1/1:3,9:11:3.01:48,3,0	1/1:15,21:28:6.86:81,7,0	1/1:31,0:17:39.09:465,39,0	1/1:5,11:13:15.05:221,15,0	1/1:4,13:15:24.06:317,24,0	1/1:10,10:15:15.04:205,15,0	1/1:27,4:26:26.96:374,27,0	1/1:5,6:11:8.47:166,8,0	0/1:7,14:18:0:0,0,0	1/1:11,19:24:18.05:252,18,0	1/1:8,16:22:26.52:401,27,0	1/1:5,17:21:8.14:184,8,0	1/1:8,7:14:2.72:109,3,0	1/1:14,0:10:24.03:285,24,0	1/1:5,8:9:3.01:48,3,0	1/1:18,19:28:4.71:93,5,0	1/1:6,16:18:5.41:94,5,0	1/1:18,0:15:5.36:61,5,0	1/1:11,19:26:5.59:62,6,0	1/1:24,0:16:5.48:78,5,0	1/1:9,18:23:30.09:404,30,0	1/1:13,2:11:8.01:175,8,0	1/1:7,10:11:11.49:232,11,0
chr10	105467111	.	GT	G	2595.53	PASS	AB=0.904;AC=44;AF=0.786;AN=56;BaseQRankSum=3.889;DP=662;FS=2.062;HRun=2;HaplotypeScore=75.2785;InbreedingCoeff=0.2305;MQ=49.11;MQ0=110;MQRankSum=-2.708;QD=4.91;ReadPosRankSum=6.801;VQSLOD=0.6901;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:27,2:18:5.46:32,5,0	1/1:2,8:9:20.90:242,21,0	0/0:53,1:21:62.50:0,62,705	0/0:59,1:22:59.76:0,60,680	0/1:18,0:16:9.36:9,0,14	1/1:10,1:10:2.88:15,3,0	0/1:35,0:27:3.04:23,0,3	0/1:11,20:18:12.39:440,0,12	1/1:15,1:13:14.42:78,14,0	0/1:16,1:15:5.09:225,0,5	1/1:19,0:14:14.47:80,14,0	1/1:29,1:26:2.87:97,3,0	1/1:9,1:11:16.50:119,17,0	0/0:19,0:16:2.78:0,3,24	1/1:29,0:22:17.35:95,17,0	0/1:23,1:22:21.01:109,0,21	1/1:19,1:20:14.98:100,15,0	1/1:13,1:13:12.65:62,13,0	1/1:3,11:10:24.03:285,24,0	1/1:11,2:9:2.88:15,3,0	0/1:32,2:25:13.67:40,0,14	1/1:21,1:18:5.38:30,5,0	1/1:17,1:15:5.58:33,6,0	1/1:28,0:24:5.59:34,6,0	1/1:18,5:15:5.55:40,6,0	1/1:24,0:20:28.54:227,29,0	1/1:6,10:12:20.63:203,21,0	1/1:12,3:11:17.39:115,17,0
chr10	105467602	.	AT	A	630.79	PASS	AB=0.910;AC=8;AF=0.143;AN=56;BaseQRankSum=5.300;DP=572;FS=0.000;HRun=13;HaplotypeScore=67.1625;InbreedingCoeff=0.5972;MQ=69.89;MQ0=0;MQRankSum=-0.359;QD=6.07;ReadPosRankSum=1.865;VQSLOD=2.2604;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:34:43.85:0,44,521	0/0:3,0:10:17.15:0,17,90	0/0:11,1:12:1.98:0,2,147	0/0:8,0:8:2.98:0,3,23	0/0:30,4:34:4.74:0,5,517	1/1:5,18:23:23.59:341,24,0	1/1:2,17:20:13.88:260,14,0	0/0:28,0:31:22.95:0,23,357	0/0:16,1:17:11.13:0,11,265	0/0:26,2:28:16.58:0,17,461	0/0:18,0:18:28.29:0,28,265	0/0:19,1:20:18.03:0,18,326	0/0:27,2:29:13.20:0,13,429	0/0:14,1:15:13.96:0,14,270	0/1:24,3:27:11.66:12,0,375	0/0:22,2:24:19.26:0,19,502	0/0:25,1:26:41.15:0,41,544	0/0:21,0:21:42.07:0,42,409	0/0:17,1:19:16.95:0,17,302	0/0:17,1:18:20.12:0,20,339	0/0:20,0:20:38.95:0,39,361	0/0:16,0:16:33.76:0,34,302	0/0:15,0:15:27.04:0,27,263	0/0:22,0:22:42.52:0,43,404	1/1:1,9:11:22.91:159,23,0	0/1:21,2:23:1.76:2,0,308	0/0:18,1:19:18.02:0,18,319	0/0:11,1:12:6.32:0,6,192
chr10	105470552	.	TACCCAGCC	T	695.34	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.133;DP=784;FS=5.004;HRun=0;HaplotypeScore=192.2295;InbreedingCoeff=0.9989;MQ=84.74;MQ0=0;MQRankSum=-4.340;QD=69.53;ReadPosRankSum=0.673;VQSLOD=3.5612;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,178,7820	1/1:0,10:10:27.09:789,27,0	0/0:26,0:26:78.05:0,78,2863	0/0:24,0:24:61.41:0,61,2201	0/0:18,0:18:54.19:0,54,2354	0/0:19,0:19:57.15:0,57,2313	0/0:29,0:29:87.30:0,87,3855	0/0:29,0:29:87.30:0,87,3477	0/0:27,0:27:81.26:0,81,3454	0/0:35,0:35:99:0,105,4689	0/0:15,0:15:45.15:0,45,1949	0/0:47,0:47:99:0,141,6160	0/0:29,0:29:87.30:0,87,3710	0/0:43,0:43:99:0,129,5721	0/0:30,0:30:84.29:0,84,3552	0/0:34,0:34:99:0,102,4564	0/0:30,0:30:87.30:0,87,3652	0/0:24,0:24:72.25:0,72,3180	0/0:20,0:20:57.20:0,57,2252	0/0:15,0:15:39.13:0,39,1651	0/0:44,0:44:99:0,132,5764	0/0:19,0:19:51.14:0,51,2004	0/0:19,0:19:57.13:0,57,2414	0/0:33,0:33:96.33:0,96,4219	0/0:21,0:21:60.21:0,60,2374	0/0:32,0:32:96.33:0,96,4105	0/0:29,0:29:87.30:0,87,3794	0/0:22,0:22:66.23:0,66,2920
chr10	105470737	.	G	GCGCGCA	252.51	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=0.519;DP=626;FS=0.000;HRun=0;HaplotypeScore=134.3025;InbreedingCoeff=0.5547;MQ=68.12;MQ0=0;MQRankSum=0.316;QD=13.29;ReadPosRankSum=-0.159;VQSLOD=2.2312;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,2067	1/1:0,7:8:9.03:326,9,0	0/0:13,0:13:7.01:0,7,84	0/1:11,0:9:22.79:23,0,63	0/0:15,0:15:32.36:0,32,514	0/0:22,0:22:63.10:0,63,1258	0/0:24,0:24:63.11:0,63,1147	0/0:22,0:22:59.90:0,60,830	0/0:21,0:21:63.17:0,63,1290	0/0:17,0:17:43.74:0,44,760	0/0:9,0:9:24:0,24,434	0/0:45,0:45:99:0,129,2505	0/0:22,0:22:62.95:0,63,1107	0/0:35,0:35:99:0,102,1923	0/0:23,0:23:68.97:0,69,1144	0/0:20,0:20:57:0,57,955	0/0:30,0:30:89.49:0,89,1735	0/0:43,0:43:99:0,126,2462	0/0:8,0:8:21.02:0,21,415	0/0:22,0:22:62.28:0,62,1094	0/0:48,0:48:99:0,144,2705	0/0:10,0:10:30.05:0,30,610	0/0:12,0:12:29.93:0,30,554	0/0:40,0:40:99:0,120,2585	0/0:12,0:12:33.02:0,33,607	0/0:29,0:29:81.06:0,81,1547	0/0:16,0:16:44.98:0,45,864	0/0:11,0:11:22.56:0,23,358
chr10	105475908	.	CT	C	207.01	PASS	AB=0.875;AC=3;AF=0.054;AN=56;BaseQRankSum=4.176;DP=682;FS=0.000;HRun=11;HaplotypeScore=76.0273;InbreedingCoeff=0.7509;MQ=65.24;MQ0=1;MQRankSum=-0.116;QD=6.90;ReadPosRankSum=1.160;VQSLOD=2.0551;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,120,1236	1/1:2,14:16:37.96:301,38,0	0/0:13,0:9:14.01:0,14,110	0/0:11,0:9:15.02:0,15,146	0/0:24,0:25:62.98:0,63,646	0/0:25,0:25:69.17:0,69,728	0/0:22,0:25:62.82:0,63,635	0/0:26,0:26:60.13:0,60,626	0/0:16,1:17:20.46:0,20,415	0/0:24,0:26:60.45:0,60,618	0/0:13,0:13:27.05:0,27,288	0/0:17,0:17:45.07:0,45,451	0/0:18,0:18:42.10:0,42,445	0/0:29,0:29:59.14:0,59,677	0/0:25,0:25:57.14:0,57,602	0/0:30,1:32:43.63:0,44,682	0/0:34,1:35:68.28:0,68,888	0/0:32,0:33:69.13:0,69,717	0/0:20,0:20:54:0,54,552	0/0:18,1:21:46.83:0,47,473	0/0:34,0:35:87.07:0,87,897	0/0:28,0:28:69.65:0,70,736	0/1:11,2:14:0.60:1,0,191	0/0:28,2:30:47.51:0,48,691	0/0:26,0:27:64.72:0,65,646	0/0:30,0:30:69.13:0,69,708	0/0:34,0:34:69.46:0,69,893	0/0:10,0:11:20.89:0,21,195
chr10	105477895	.	TACACACACAG	T	539.45	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.255;DP=1158;FS=10.383;HRun=0;HaplotypeScore=329.8226;InbreedingCoeff=0.9976;MQ=58.53;MQ0=12;MQRankSum=-5.234;QD=44.95;ReadPosRankSum=0.727;VQSLOD=1.9623;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:56:99:0,144,5859	1/1:0,12:12:24.08:633,24,0	0/0:46,0:25:41.21:0,41,1110	0/0:44,0:25:46.01:0,46,1238	0/0:33,0:33:72.23:0,72,2765	0/0:40,0:40:96.32:0,96,4097	0/0:36,0:37:72.08:0,72,2535	0/0:42,0:39:87.29:0,87,2836	0/0:40,0:40:99:0,105,4113	0/0:61,0:60:99:0,144,6119	0/0:20,0:20:48.16:0,48,2205	0/0:48,0:48:99:0,123,5328	0/0:45,0:45:99:0,117,4937	0/0:47,0:47:99:0,111,5022	0/0:60,0:60:99:0,141,6231	0/0:66,0:66:99:0,160,6459	0/0:43,0:43:99:0,107,4561	0/0:33,0:33:81.20:0,81,3252	0/0:23,0:20:39.08:0,39,1435	0/0:35,0:35:93.23:0,93,3880	0/0:77,0:76:99:0,178,7084	0/0:50,0:50:99:0,120,4751	0/0:35,0:35:72.25:0,72,3003	0/0:50,0:50:99:0,112,5358	0/0:20,0:20:33.10:0,33,1140	0/0:37,0:37:93.30:0,93,3799	0/0:35,0:35:87.28:0,87,3778	0/0:22,0:22:51.17:0,51,2000
chr10	105478216	.	ACACACACACCCACACCCACACC	A	112.40	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=5.027;DP=821;FS=4.072;HRun=0;HaplotypeScore=431.0696;InbreedingCoeff=0.4755;MQ=59.02;MQ0=7;MQRankSum=-4.990;QD=3.88;ReadPosRankSum=-2.632;VQSLOD=0.6778;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:78.04:0,78,3631	1/1:1,7:8:3.01:179,3,0	0/0:47,0:27:40.08:0,40,1225	0/0:37,0:28:35.31:0,35,891	0/0:21,0:21:45.14:0,45,2643	0/0:30,0:30:72.65:0,73,4313	0/0:25,0:25:63.18:0,63,3707	0/0:50,0:50:99:0,108,3392	0/0:20,0:20:48.15:0,48,2946	0/0:29,0:29:66.15:0,66,3722	0/0:18,0:18:45.15:0,45,2911	0/0:41,0:41:61.93:0,62,4678	0/0:20,0:20:48.14:0,48,2502	0/0:27,0:26:51.17:0,51,3001	0/0:35,0:35:69.20:0,69,4570	0/0:32,0:32:87.27:0,87,4877	0/0:26,0:26:58.79:0,59,4654	0/1:21,0:20:24.87:25,0,3421	0/0:22,0:21:48.09:0,48,1773	0/0:25,0:25:66.19:0,66,3630	0/0:64,0:63:99:0,157,9379	0/0:32,0:32:54.37:0,54,3081	0/0:23,0:23:48.61:0,49,2090	0/0:34,0:34:75.29:0,75,4004	0/0:24,0:24:40.81:0,41,3101	0/0:29,0:28:69.19:0,69,4199	0/0:18,0:18:48.16:0,48,3348	0/0:30,0:30:57.19:0,57,4894
chr10	105478238	.	CCA	C	462.73	PASS	AB=0.914;AC=19;AF=0.352;AN=54;BaseQRankSum=6.612;DP=760;FS=0.567;HRun=0;HaplotypeScore=106.0533;InbreedingCoeff=-0.4219;MQ=56.30;MQ0=26;MQRankSum=0.491;QD=0.94;ReadPosRankSum=0.989;VQSLOD=2.0191;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,5:35:11.08:0,11,665	1/1:7,0:7:2.80:13,3,0	./.	0/0:27,0:15:6:0,6,52	0/0:17,0:17:27.04:0,27,330	0/1:26,2:27:31.45:31,0,419	0/1:21,0:21:14.46:14,0,208	0/1:37,1:35:12.29:12,0,203	0/1:17,2:18:32.42:32,0,375	0/1:32,1:31:30.30:30,0,695	0/0:17,1:18:12.80:0,13,308	0/0:35,1:36:23.41:0,23,773	0/1:14,0:14:38.32:38,0,120	0/0:22,0:21:7.88:0,8,454	0/1:22,3:26:9.33:9,0,768	0/1:29,7:36:74.91:75,0,663	0/1:31,5:35:84.54:85,0,737	0/1:19,3:20:55.68:56,0,486	0/1:20,1:16:6.81:7,0,266	0/0:24,3:25:5.31:0,5,431	0/1:56,9:63:83.50:84,0,797	0/1:23,5:27:29.02:29,0,399	0/1:17,2:19:52.53:53,0,99	0/0:34,1:36:45.01:0,45,611	0/1:18,6:24:31.43:31,0,422	0/1:34,1:32:10.35:10,0,617	0/1:17,2:19:3.68:4,0,372	0/0:20,5:24:11.31:0,11,552
chr10	105478310	.	AGAAG	A	127.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.319;DP=723;FS=1.849;HRun=0;HaplotypeScore=122.7431;InbreedingCoeff=0.9684;MQ=86.16;MQ0=0;MQRankSum=-1.123;QD=18.23;ReadPosRankSum=1.160;VQSLOD=3.0585;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:93.20:0,93,2177	1/1:1,6:7:12.04:214,12,0	0/0:27,0:27:54.19:0,54,1288	0/0:33,0:33:78.04:0,78,1891	0/0:21,0:20:48.14:0,48,1140	0/0:21,0:21:54.19:0,54,1391	0/0:24,0:24:69.17:0,69,1697	0/0:38,0:38:99:0,105,2651	0/0:19,0:19:42.14:0,42,1055	0/0:42,0:42:99:0,117,2911	0/0:20,0:20:57.19:0,57,1347	0/0:30,0:30:81.26:0,81,1982	0/0:24,0:24:69.24:0,69,1750	0/0:25,0:25:72.19:0,72,1734	0/0:35,0:35:96.33:0,96,2460	0/0:26,0:26:60.21:0,60,1520	0/0:29,0:29:75.23:0,75,1825	0/0:14,0:14:39.13:0,39,995	0/0:17,0:17:51.18:0,51,1282	0/0:27,0:27:81.20:0,81,1958	0/0:34,0:34:93.10:0,93,2168	0/0:30,0:30:75.17:0,75,1864	0/0:18,0:18:51.17:0,51,1279	0/0:35,0:35:96.23:0,96,2328	0/0:21,0:21:57.20:0,57,1466	0/0:33,0:33:87.30:0,87,2181	0/0:16,0:16:39.13:0,39,1003	0/0:19,0:19:54.19:0,54,1393
chr10	105478764	.	AG	A	3646.01	PASS	AB=0.869;AC=54;AF=0.964;AN=56;BaseQRankSum=2.403;DP=425;FS=9.857;HRun=2;HaplotypeScore=99.6639;InbreedingCoeff=-0.0107;MQ=70.35;MQ0=4;MQRankSum=2.086;QD=8.58;ReadPosRankSum=0.733;VQSLOD=0.3112;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:53.36:212,53,0	1/1:4,1:5:9.98:36,10,0	0/1:21,4:18:53.15:53,0,207	0/1:29,5:25:78.93:79,0,267	1/1:8,0:8:15.63:52,16,0	1/1:13,1:13:27.90:158,28,0	1/1:24,4:27:63.39:311,63,0	1/1:17,0:17:35.41:178,35,0	1/1:21,0:21:46.59:174,47,0	1/1:14,0:14:5.26:126,5,0	1/1:13,0:13:31.53:131,32,0	1/1:16,0:16:33.68:141,34,0	1/1:7,1:8:10.82:60,11,0	1/1:6,1:7:14.17:101,14,0	1/1:15,0:15:39.01:199,39,0	1/1:17,1:18:32.98:209,33,0	1/1:18,1:19:30.81:144,31,0	1/1:14,0:14:7.14:87,7,0	1/1:8,0:8:10.31:103,10,0	1/1:8,0:8:15.48:57,15,0	1/1:19,1:20:36.74:158,37,0	1/1:8,0:8:16.59:61,17,0	1/1:11,0:11:24.78:128,25,0	1/1:24,1:25:53.20:243,53,0	1/1:11,1:12:32.34:153,32,0	1/1:11,0:11:26.26:147,26,0	1/1:17,0:17:7.20:136,7,0	1/1:2,0:2:1.27:8,1,0
chr10	105478768	.	AC	A	2444.28	PASS	AB=0.980;AC=42;AF=0.750;AN=56;BaseQRankSum=-0.268;DP=492;FS=1.704;HRun=1;HaplotypeScore=111.0417;InbreedingCoeff=-0.1769;MQ=61.37;MQ0=12;MQRankSum=2.108;QD=5.18;ReadPosRankSum=2.591;VQSLOD=0.8033;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:35:35.53:187,36,0	1/1:5,0:5:10.38:41,10,0	0/0:20,0:12:13.18:0,13,263	0/1:30,3:24:37.60:38,0,362	0/1:11,0:10:29.57:30,0,46	1/1:11,0:11:21.19:87,21,0	1/1:26,0:29:61.75:270,62,0	1/1:15,0:15:33.81:189,34,0	1/1:23,0:23:4.69:140,5,0	0/1:19,0:19:18.79:133,0,19	1/1:14,0:14:20.25:125,20,0	1/1:16,0:16:0.71:90,1,0	1/1:7,0:8:11.66:53,12,0	1/1:11,1:11:0.63:52,1,0	1/1:16,0:15:5.18:128,5,0	0/1:19,1:19:66.99:102,0,67	0/1:21,0:22:68.48:68,0,84	0/1:20,0:20:18.17:74,0,18	0/1:8,0:8:1.28:1,0,48	0/1:12,0:12:7.45:7,0,87	0/1:29,1:29:42.72:145,0,43	0/1:12,0:12:37.65:38,0,40	1/1:15,0:15:3.93:81,4,0	0/1:34,1:34:63.15:182,0,63	1/1:14,0:14:28.42:114,28,0	1/1:14,0:14:1.84:131,2,0	0/1:17,0:17:25.59:80,0,26	1/1:2,0:2:3.15:12,3,0
chr10	105479163	.	C	CG	105.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.339;DP=700;FS=2.037;HRun=0;HaplotypeScore=66.9758;InbreedingCoeff=0.9679;MQ=86.29;MQ0=0;MQRankSum=-1.875;QD=26.30;ReadPosRankSum=2.624;VQSLOD=4.4655;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1512	1/1:0,4:4:12.04:191,12,0	0/0:20,0:20:57.14:0,57,738	0/0:29,0:29:82.41:0,82,1051	0/0:25,0:25:69.23:0,69,963	0/0:21,0:21:63.21:0,63,881	0/0:29,0:29:87.25:0,87,1163	0/0:28,0:28:72.24:0,72,1007	0/0:18,0:18:54.17:0,54,738	0/0:31,0:31:90.30:0,90,1255	0/0:15,0:15:45.13:0,45,595	0/0:27,0:27:78.26:0,78,1089	0/0:39,0:39:99:0,117,1600	0/0:25,0:25:72.23:0,72,989	0/0:27,0:27:78.24:0,78,1058	0/0:34,0:34:99:0,99,1384	0/0:29,0:29:87.29:0,87,1214	0/0:21,0:21:63.21:0,63,881	0/0:19,0:19:54.17:0,54,725	0/0:13,0:13:33.07:0,33,461	0/0:51,0:51:99:0,153,2088	0/0:23,0:23:69.20:0,69,929	0/0:12,0:12:33.11:0,33,461	0/0:31,0:30:90.29:0,90,1240	0/0:21,0:21:63.02:0,63,809	0/0:39,0:39:99:0,117,1603	0/0:17,0:16:51.16:0,51,696	0/0:14,0:14:36.12:0,36,503
chr10	105479941	.	C	CAA	295.91	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.495;DP=570;FS=2.134;HRun=9;HaplotypeScore=74.3235;InbreedingCoeff=0.8936;MQ=71.72;MQ0=3;MQRankSum=-0.413;QD=19.73;ReadPosRankSum=1.075;VQSLOD=2.4957;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.15:0,60,638	1/1:4,11:15:28.82:390,29,0	0/0:19,0:15:22.65:0,23,219	0/0:11,0:7:6.01:0,6,63	0/0:28,0:29:71.67:0,72,736	0/0:28,0:27:66.16:0,66,702	0/0:11,0:11:27.06:0,27,287	0/0:27,0:29:37.26:0,37,588	0/0:14,0:14:33.06:0,33,351	0/0:33,0:33:90.21:0,90,958	0/0:16,0:17:36.02:0,36,438	0/0:20,0:20:51.12:0,51,541	0/0:23,0:23:57.11:0,57,599	0/0:21,0:21:51.12:0,51,542	0/0:20,0:20:45.06:0,45,470	0/0:20,0:19:60.15:0,60,639	0/0:14,0:14:36.05:0,36,438	0/0:23,0:23:63.11:0,63,651	0/0:17,0:17:39.01:0,39,387	0/0:28,0:29:72.09:0,72,802	0/0:13,0:13:30.06:0,30,319	0/0:27,0:27:69.14:0,69,727	0/0:18,0:18:48.10:0,48,501	0/0:17,0:17:39.08:0,39,414	0/0:24,0:25:54.03:0,54,614	0/0:16,0:16:39.07:0,39,407	0/0:28,0:28:78.16:0,78,813	0/0:10,0:10:18:0,18,192
chr10	105479979	.	A	AC	2263.50	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-10.649;DP=625;FS=26.303;HRun=1;HaplotypeScore=62.7588;InbreedingCoeff=0.8801;MQ=70.74;MQ0=2;MQRankSum=1.101;QD=27.60;ReadPosRankSum=2.665;VQSLOD=2.1167;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.09:0,87,1066	0/1:13,0:13:3.82:4,0,25	0/0:12,0:12:32.62:0,33,358	0/0:17,0:14:27.64:0,28,308	0/0:36,0:36:99:0,102,1286	1/1:0,30:30:72.24:1018,72,0	1/1:0,15:15:36.12:510,36,0	0/0:37,0:37:99:0,111,1298	0/0:14,0:14:39.13:0,39,503	0/0:33,0:33:86.66:0,87,1121	0/0:20,0:20:60.17:0,60,739	0/0:14,0:14:42.12:0,42,516	0/0:16,0:16:48.13:0,48,592	0/0:17,0:17:48.14:0,48,596	0/0:22,0:22:63.18:0,63,788	0/0:27,0:26:81.23:0,81,1016	0/0:24,0:24:69.16:0,69,820	0/0:33,0:33:90.62:0,91,1080	0/0:23,0:23:69.19:0,69,825	0/0:17,0:17:51.16:0,51,646	0/0:18,0:18:54.16:0,54,673	0/0:30,0:30:90.29:0,90,1161	0/0:23,0:23:66.18:0,66,820	0/0:11,0:11:33.08:0,33,397	1/1:1,23:24:63.20:876,63,0	0/0:20,0:20:54.16:0,54,671	0/0:30,0:30:84.25:0,84,1056	0/0:19,0:19:57.17:0,57,721
chr10	105491486	.	C	CA	1114.89	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-4.453;DP=538;FS=1.253;HRun=9;HaplotypeScore=51.7739;InbreedingCoeff=0.8568;MQ=66.31;MQ0=3;MQRankSum=-1.496;QD=20.65;ReadPosRankSum=0.968;VQSLOD=4.1972;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,4:38:58.87:0,59,724	0/0:15,0:15:38.99:0,39,338	0/0:5,0:5:10.81:0,11,83	0/0:8,0:8:20.84:0,21,174	0/0:16,1:17:5.79:0,6,276	1/1:5,11:15:7.07:306,7,0	1/1:5,21:27:63:675,63,0	0/0:32,0:32:74.94:0,75,647	0/0:19,0:19:56.97:0,57,489	0/0:17,0:17:44.98:0,45,391	0/0:21,0:21:59.99:0,60,521	0/0:24,0:24:68.96:0,69,592	0/0:18,0:18:47.96:0,48,412	0/0:20,0:20:47.96:0,48,413	0/0:20,0:20:53.99:0,54,469	0/0:25,0:25:68.96:0,69,596	0/0:27,0:27:65.95:0,66,568	0/0:21,0:21:50.98:0,51,443	0/0:21,0:20:44.98:0,45,390	0/0:23,0:23:53.96:0,54,469	0/0:17,0:17:50.91:0,51,427	0/0:13,0:13:35.98:0,36,309	0/0:15,0:15:35.98:0,36,312	0/0:20,0:20:44.97:0,45,388	1/1:2,9:11:3.99:259,4,0	0/0:16,0:16:26.96:0,27,231	0/0:20,1:23:30.88:0,31,474	0/0:8,0:8:24:0,24,208
chr10	105498222	.	TA	T	655.61	PASS	AB=0.870;AC=12;AF=0.214;AN=56;BaseQRankSum=3.992;DP=406;FS=4.665;HRun=12;HaplotypeScore=42.8992;InbreedingCoeff=0.5006;MQ=59.46;MQ0=7;MQRankSum=1.996;QD=7.45;ReadPosRankSum=1.873;VQSLOD=1.6358;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,1:21:30.87:0,31,493	1/1:1,1:3:8:50,8,0	0/0:8,0:7:5.68:0,6,103	0/0:5,0:3:4.25:0,4,34	0/0:17,0:18:42.69:0,43,383	1/1:4,17:20:50.78:395,51,0	1/1:2,4:6:8.96:70,9,0	0/0:46,0:41:65.71:0,66,591	0/0:12,0:12:23.99:0,24,225	0/0:13,0:13:39.08:0,39,396	0/1:10,1:10:1.77:2,0,149	0/1:6,2:8:2.20:2,0,162	0/0:14,1:13:30.06:0,30,304	0/0:9,0:9:24.04:0,24,238	0/0:12,0:12:30.53:0,31,305	0/0:14,0:14:25.32:0,25,286	0/0:24,2:26:42.86:0,43,601	0/0:17,1:20:24.44:0,24,369	0/1:14,2:15:10.33:10,0,259	0/0:14,1:14:3.81:0,4,215	0/0:6,0:6:17.36:0,17,131	0/1:5,1:7:8.37:8,0,91	0/0:10,0:11:23.88:0,24,227	0/0:1,0:1:3.01:0,3,30	1/1:3,13:16:11.40:271,11,0	0/0:21,0:23:55.14:0,55,511	0/0:17,4:21:4.61:0,5,397	0/0:19,0:19:48.91:0,49,470
chr10	105498667	.	A	AGG	1472.07	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-2.103;DP=658;FS=0.000;HRun=7;HaplotypeScore=78.6949;InbreedingCoeff=0.9801;MQ=65.95;MQ0=4;MQRankSum=-1.483;QD=19.37;ReadPosRankSum=1.292;VQSLOD=1.3177;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:69.17:0,69,790	1/1:1,0:12:18.33:63,18,0	0/0:26,0:13:23.98:0,24,248	0/0:16,0:10:15.01:0,15,170	0/0:24,0:24:63.14:0,63,713	1/1:3,18:21:36.12:566,36,0	1/1:5,10:15:24.08:387,24,0	0/0:23,1:25:10.62:0,11,641	0/0:31,0:31:81.22:0,81,936	0/0:18,0:18:42.09:0,42,474	0/0:25,0:25:60.13:0,60,677	0/0:27,0:27:75.21:0,75,862	0/0:22,0:22:57.14:0,57,649	0/0:17,0:17:39.09:0,39,438	0/0:38,0:38:84.17:0,84,955	0/0:41,0:41:99:0,108,1242	0/0:19,0:19:48.13:0,48,558	0/0:33,0:32:81.17:0,81,916	0/0:20,0:20:59.91:0,60,674	0/0:22,0:23:44.74:0,45,498	0/0:19,0:19:48.13:0,48,547	0/0:17,0:17:48.13:0,48,548	0/0:13,0:13:32.89:0,33,348	0/0:23,0:22:51.13:0,51,593	1/1:6,19:28:39.13:614,39,0	0/0:25,1:26:26.72:0,27,777	0/0:36,0:36:96.25:0,96,1092	0/0:12,0:11:27.08:0,27,314
chr10	105499966	.	TC	T	641.74	PASS	AB=0.960;AC=14;AF=0.304;AN=46;BaseQRankSum=3.413;DP=199;FS=18.933;HRun=13;HaplotypeScore=29.7184;InbreedingCoeff=0.3402;MQ=78.70;MQ0=0;MQRankSum=-0.235;QD=6.98;ReadPosRankSum=2.638;VQSLOD=0.4718;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:3.27:0,3,14	0/0:2,0:2:0:0,0,0	0/1:10,0:11:7.29:7,0,68	0/0:6,0:5:3:0,3,29	./.	1/1:5,8:13:26.81:197,27,0	1/1:4,16:20:44.73:328,45,0	0/1:11,1:12:14.70:34,0,15	1/1:3,0:3:2.95:22,3,0	./.	./.	0/0:9,0:9:11.80:0,12,81	./.	0/0:8,0:8:3.46:0,3,24	0/0:8,0:8:6.46:0,6,49	0/0:5,0:5:5.99:0,6,49	0/0:14,0:14:10.81:0,11,81	0/0:8,0:8:8.92:0,9,65	0/1:4,0:5:7.31:7,0,9	./.	0/0:15,0:15:0:0,0,0	0/0:4,0:4:0:0,0,0	0/0:6,0:6:5.95:0,6,43	0/1:11,0:11:4:4,0,60	1/1:1,10:11:20.88:153,21,0	0/0:3,0:3:0:0,0,0	1/1:6,0:6:2.88:21,3,0	0/0:1,0:1:0:0,0,0
chr10	105501502	.	TAAA	T	378.71	PASS	AB=0.980;AC=7;AF=0.130;AN=54;BaseQRankSum=1.328;DP=384;FS=6.111;HRun=15;HaplotypeScore=78.8015;InbreedingCoeff=0.6077;MQ=84.43;MQ0=14;MQRankSum=1.368;QD=5.49;ReadPosRankSum=2.166;VQSLOD=-0.7078;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:10:15.05:0,15,263	0/0:1,0:7:7.48:0,7,17	0/0:51,0:25:1.47:0,1,244	0/1:48,1:22:9.27:9,0,176	0/0:11,0:11:25.33:0,25,407	1/1:0,6:6:18.05:202,18,0	1/1:1,3:4:6:67,6,0	0/0:32,0:32:57.17:0,57,895	0/0:5,0:6:15.02:0,15,213	0/0:12,0:12:27.08:0,27,466	0/0:2,0:2:6.02:0,6,110	0/0:8,0:10:27.09:0,27,456	0/0:7,0:7:19.88:0,20,319	0/0:6,0:6:18.05:0,18,273	0/0:8,0:8:18.06:0,18,289	0/0:9,0:9:12.04:0,12,190	0/0:36,0:42:96.23:0,96,1570	0/0:28,0:30:87.25:0,87,1417	0/0:4,0:3:6.02:0,6,110	0/0:7,0:9:24.06:0,24,396	./.	0/0:4,0:4:9.03:0,9,165	0/0:4,0:4:6.02:0,6,110	0/0:2,0:2:6.02:0,6,110	1/1:1,9:10:20.84:235,21,0	0/0:10,0:10:24.08:0,24,438	0/0:11,0:13:29.71:0,30,529	0/0:14,0:15:39.11:0,39,663
chr10	105505321	.	C	CT	691.32	PASS	AB=0.922;AC=11;AF=0.196;AN=56;BaseQRankSum=-3.948;DP=618;FS=0.613;HRun=12;HaplotypeScore=72.8171;InbreedingCoeff=0.6448;MQ=65.83;MQ0=3;MQRankSum=-1.517;QD=6.52;ReadPosRankSum=-1.967;VQSLOD=1.8468;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,2:37:18.71:0,19,357	1/1:2,4:6:12.02:117,12,0	0/0:13,0:10:7.78:0,8,39	0/0:12,0:12:7.52:0,8,39	0/0:28,0:30:36.62:0,37,247	1/1:4,17:21:27.04:263,27,0	1/1:7,7:14:15.02:145,15,0	0/0:23,1:24:8.54:0,9,211	0/0:19,0:19:47.66:0,48,347	0/0:19,0:22:37.90:0,38,243	0/1:15,1:16:8.64:9,0,98	0/0:22,0:24:42.75:0,43,294	0/0:24,0:24:31.94:0,32,239	0/0:17,0:17:26.53:0,27,196	0/0:27,0:27:33.72:0,34,368	0/0:35,0:36:47.97:0,48,440	0/0:30,0:31:46.76:0,47,401	0/0:27,0:27:62.42:0,62,436	0/0:17,0:21:32.87:0,33,213	0/0:26,0:26:43.81:0,44,320	0/1:16,2:20:27.70:28,0,132	0/0:15,0:16:25:0,25,166	0/0:17,0:19:36.03:0,36,249	0/0:26,1:27:29.73:0,30,385	1/1:4,14:18:30.05:292,30,0	0/0:25,1:27:14.47:0,14,256	0/0:26,0:29:12.62:0,13,187	0/1:10,1:10:2.35:2,0,148
chr10	105506120	.	G	GA	456.10	PASS	AB=0.907;AC=8;AF=0.143;AN=56;BaseQRankSum=3.506;DP=491;FS=1.400;HRun=14;HaplotypeScore=67.1091;InbreedingCoeff=0.3241;MQ=59.42;MQ0=4;MQRankSum=0.042;QD=4.70;ReadPosRankSum=-0.797;VQSLOD=1.6042;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:28:22.76:0,23,264	0/0:6,0:6:14.73:0,15,96	0/1:10,1:7:19.46:25,0,19	0/0:5,0:4:5.81:0,6,35	0/0:11,0:13:10.78:0,11,63	1/1:5,18:27:5.27:288,5,0	1/1:7,13:20:23.95:204,24,0	0/0:30,0:32:40.88:0,41,245	0/0:8,0:9:13.71:0,14,83	0/0:15,0:18:32.14:0,32,188	0/0:16,2:18:20.45:0,20,134	0/0:18,2:20:9.09:0,9,185	0/1:12,1:15:26.14:26,0,67	0/0:16,0:16:23.55:0,24,154	0/0:22,0:22:15.05:0,15,209	0/0:24,1:25:32.72:0,33,338	0/0:26,0:27:24.74:0,25,348	0/0:23,2:26:22.89:0,23,268	0/0:14,0:14:23.59:0,24,153	0/0:17,2:19:6.02:0,6,166	0/0:9,0:12:16.21:0,16,78	0/1:12,1:12:8.70:9,0,78	0/0:17,0:18:15.35:0,15,178	0/0:8,0:8:17.72:0,18,115	0/1:8,2:11:14.10:42,0,14	0/0:15,0:16:31.45:0,31,198	0/0:26,0:27:37.26:0,37,236	0/0:11,0:11:17.61:0,18,115
chr10	105507596	.	GGT	G	279.55	PASS	AB=0.975;AC=13;AF=0.250;AN=52;BaseQRankSum=1.594;DP=526;FS=7.668;HRun=0;HaplotypeScore=69.6869;InbreedingCoeff=-0.2988;MQ=74.15;MQ0=10;MQRankSum=0.910;QD=1.23;ReadPosRankSum=1.034;VQSLOD=0.4695;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,2:32:57.74:58,0,134	1/1:7,0:7:0.47:1,0,0	./.	./.	0/0:12,0:12:2.98:0,3,21	0/1:20,2:22:12.90:85,0,13	0/1:24,0:24:12.99:13,0,101	0/0:19,0:19:11.91:0,12,108	0/1:11,0:11:15.16:15,0,79	0/1:15,0:15:22.07:22,0,63	0/1:12,0:12:13.75:14,0,101	0/1:23,1:24:96.35:96,0,112	0/0:13,0:13:6:0,6,63	0/1:13,0:13:20.24:20,0,87	0/1:24,0:24:8.29:8,0,249	0/0:13,0:13:9.03:0,9,124	0/1:25,1:28:60.28:60,0,290	0/0:27,0:24:0.26:0,0,304	0/0:21,0:21:5.93:0,6,54	0/0:12,0:12:3:0,3,26	0/0:32,0:30:21:0,21,197	0/1:16,0:16:20.11:20,0,77	0/0:13,0:12:6:0,6,68	0/0:27,1:26:3.22:0,3,361	0/0:15,0:15:15:0,15,160	0/0:22,0:22:15.02:0,15,159	0/0:17,0:16:9.48:0,9,93	0/0:16,0:14:12.49:0,12,157
chr10	105509080	.	GGGTTT	G	710.48	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=6.359;DP=648;FS=0.936;HRun=0;HaplotypeScore=117.0747;InbreedingCoeff=0.8988;MQ=74.86;MQ0=7;MQRankSum=-1.207;QD=10.76;ReadPosRankSum=-0.957;VQSLOD=2.7864;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:63.09:0,63,1357	1/1:2,0:6:8.96:105,9,0	./.	./.	0/0:21,0:21:24.06:0,24,563	1/1:10,14:24:18.06:322,18,0	1/1:5,12:17:6.02:107,6,0	0/0:26,0:26:12.02:0,12,130	0/0:18,0:18:39.12:0,39,890	0/0:21,0:21:27:0,27,429	0/0:21,0:21:27.07:0,27,515	0/0:26,0:26:51.16:0,51,1120	0/0:15,0:15:12.04:0,12,237	0/0:11,0:11:18.05:0,18,396	0/0:31,0:31:63.20:0,63,1532	0/0:20,0:20:33.11:0,33,775	0/0:48,0:48:84.25:0,84,1885	0/0:27,0:27:42.09:0,42,1000	0/0:25,0:24:15.04:0,15,250	0/0:17,0:17:8.12:0,8,201	0/0:32,0:31:57.12:0,57,1322	0/0:21,0:21:33.11:0,33,726	0/0:11,0:11:14.96:0,15,209	0/0:36,0:36:63.21:0,63,1569	1/1:7,12:19:18.06:321,18,0	0/0:18,0:18:24.04:0,24,432	0/0:23,0:23:48.11:0,48,1077	0/0:18,0:18:36.07:0,36,740
chr10	105511522	.	TGAGA	T	3046.15	PASS	AB=0.944;AC=34;AF=0.708;AN=48;BaseQRankSum=2.519;DP=567;FS=4.960;HRun=0;HaplotypeScore=111.8279;InbreedingCoeff=0.4633;MQ=49.75;MQ0=24;MQRankSum=0.436;QD=7.75;ReadPosRankSum=0.724;VQSLOD=1.7419;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,11:36:0:0,0,1	1/1:7,0:9:2.74:24,3,0	./.	./.	./.	1/1:14,0:18:3.01:40,3,0	0/1:14,0:14:0:0,0,0	0/0:13,0:13:1.82:0,2,5	1/1:29,0:29:32.66:458,33,0	0/1:10,0:10:65.38:112,0,65	0/0:6,0:12:6.02:0,6,89	1/1:18,11:28:0.26:1,0,0	1/1:16,0:17:19.79:288,20,0	1/1:20,0:20:2.64:12,3,0	1/1:27,0:28:29.42:438,29,0	0/0:43,0:41:12.16:0,12,739	1/1:25,0:25:4.70:64,5,0	1/1:16,0:15:17.65:230,18,0	1/1:16,8:22:33.08:449,33,0	0/0:8,4:11:0:0,0,0	1/1:36,0:33:14.62:196,15,0	1/1:24,0:23:18.05:241,18,0	0/0:15,0:12:0:0,0,0	1/1:20,18:36:5.81:61,6,0	./.	1/1:19,5:23:8.14:105,8,0	1/1:17,0:16:24.07:326,24,0	1/1:10,0:8:9.02:120,9,0
chr10	105511561	.	GAGAA	G	1146.79	PASS	AB=0.956;AC=13;AF=0.232;AN=56;BaseQRankSum=10.298;DP=594;FS=12.423;HRun=0;HaplotypeScore=120.2514;InbreedingCoeff=-0.3051;MQ=64.26;MQ0=19;MQRankSum=-1.646;QD=4.76;ReadPosRankSum=7.636;VQSLOD=-0.0556;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:51.06:0,51,393	0/1:8,0:8:19.59:20,0,115	0/0:20,0:13:25.24:0,25,283	0/0:26,0:14:6.02:0,6,158	0/0:13,0:13:32.79:0,33,259	0/1:10,1:11:24.35:24,0,162	0/0:13,0:13:35.69:0,36,268	0/0:36,0:36:99:0,102,941	0/1:27,0:26:99:178,0,229	0/1:15,0:15:58.26:58,0,277	0/0:11,0:10:29.68:0,30,303	0/0:29,1:30:47.15:0,47,369	0/1:16,0:16:87.06:127,0,87	0/0:14,10:24:37.84:0,38,281	0/1:20,2:22:99:151,0,139	0/0:40,0:38:85.38:0,85,1332	0/1:13,11:24:17.15:17,0,249	0/1:20,1:20:99:165,0,176	0/1:29,0:28:99:240,0,297	0/0:8,0:8:14.87:0,15,119	0/0:36,0:34:6.52:0,7,492	0/1:21,1:21:82.31:82,0,176	0/0:18,0:16:35.90:0,36,299	0/0:36,1:35:16.27:0,16,342	0/0:11,0:10:23.59:0,24,148	0/1:17,0:17:3.24:3,0,250	0/1:16,0:16:86.51:147,0,87	0/1:13,0:12:83.88:84,0,145
chr10	105513185	.	TCTC	T	2655.89	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.739;DP=762;FS=0.501;HRun=0;HaplotypeScore=106.6710;InbreedingCoeff=0.9941;MQ=81.42;MQ0=0;MQRankSum=-3.996;QD=34.49;ReadPosRankSum=1.109;VQSLOD=3.9228;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,184,4038	0/0:7,0:7:15.05:0,15,346	0/0:30,0:30:87.27:0,87,1783	0/0:10,0:11:29.74:0,30,513	0/0:37,0:37:99:0,105,2194	1/1:2,27:29:66.23:1124,66,0	1/1:3,20:23:51.13:837,51,0	0/0:24,0:24:69.21:0,69,1375	0/0:27,0:27:65.40:0,65,1521	0/0:33,0:33:99:0,99,2270	0/0:16,0:16:45.11:0,45,942	0/0:31,0:31:93.23:0,93,1900	0/0:23,0:23:66.23:0,66,1502	0/0:31,0:31:93.32:0,93,2104	0/0:38,0:38:99:0,111,2515	0/0:25,0:25:75.25:0,75,1687	0/0:32,0:32:96.28:0,96,2056	0/0:15,0:15:45.15:0,45,1037	0/0:17,0:17:48.14:0,48,991	0/0:24,0:24:72.25:0,72,1626	0/0:59,0:59:99:0,172,3693	0/0:31,0:31:93.28:0,93,1976	0/0:23,0:23:63.22:0,63,1407	0/0:33,0:33:99:0,99,2192	1/1:0,25:25:51.13:837,51,0	0/0:23,0:23:66.23:0,66,1506	0/0:20,0:20:56.39:0,56,1206	0/0:14,0:14:36.12:0,36,830
chr10	105514352	.	GCTTC	G	1316.88	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.887;DP=383;FS=20.691;HRun=0;HaplotypeScore=62.9600;InbreedingCoeff=0.9034;MQ=80.87;MQ0=0;MQRankSum=-3.774;QD=22.32;ReadPosRankSum=3.012;VQSLOD=1.4038;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.07:0,63,1179	0/0:2,0:2:6:0,6,75	0/0:18,0:18:41.97:0,42,458	0/0:13,0:13:17.18:0,17,349	0/0:12,0:12:8.12:0,8,648	1/1:1,17:18:27.09:489,27,0	1/1:3,23:26:14.77:373,15,0	0/0:19,0:19:48.07:0,48,503	0/0:14,0:14:42.12:0,42,868	0/0:10,0:10:26.10:0,26,437	0/0:6,0:6:15.03:0,15,288	0/0:22,0:22:66.15:0,66,1259	0/0:19,0:19:50.48:0,50,1071	0/0:17,0:17:48.09:0,48,783	0/0:10,0:10:27.08:0,27,627	0/0:12,0:12:36.10:0,36,753	0/0:8,0:8:21.07:0,21,514	0/0:9,0:9:24.05:0,24,490	0/0:14,0:14:27.03:0,27,290	0/0:8,0:8:24.07:0,24,576	0/0:19,0:19:41.50:0,41,573	0/0:12,0:12:36.06:0,36,646	0/0:10,0:10:30.05:0,30,580	0/0:15,0:15:45:0,45,736	1/1:1,14:15:33.11:594,33,0	0/0:15,0:15:39.09:0,39,663	0/0:14,0:14:36.12:0,36,853	0/0:3,0:3:9:0,9,127
chr10	105515596	.	GT	G	2175.91	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.106;DP=638;FS=5.536;HRun=2;HaplotypeScore=64.4470;InbreedingCoeff=0.9902;MQ=89.06;MQ0=0;MQRankSum=-4.893;QD=32.48;ReadPosRankSum=2.405;VQSLOD=3.4739;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,2043	1/1:0,4:4:12.04:156,12,0	0/0:28,0:28:81.11:0,81,1040	0/0:18,0:19:44.71:0,45,536	0/0:26,0:26:74.90:0,75,1080	1/1:1,23:24:60.19:778,60,0	1/1:0,24:24:66.21:855,66,0	0/0:32,0:32:93.28:0,93,1299	0/0:20,0:20:57.19:0,57,843	0/0:21,0:21:51.13:0,51,714	0/0:14,0:14:42.14:0,42,628	0/0:23,0:23:69.23:0,69,1015	0/0:24,0:24:72.24:0,72,1078	0/0:22,0:22:66.18:0,66,928	0/0:28,0:28:84.27:0,84,1235	0/0:22,0:22:66.20:0,66,949	0/0:31,0:31:93.26:0,93,1323	0/0:23,0:23:69.21:0,69,1007	0/0:26,0:26:69.16:0,69,934	0/0:18,0:18:51.16:0,51,744	0/0:41,0:41:99:0,120,1776	0/0:17,0:17:48.15:0,48,697	0/0:18,0:18:54.17:0,54,786	0/0:19,0:18:57.17:0,57,825	1/1:0,15:15:42.14:545,42,0	0/0:28,0:28:84.25:0,84,1200	0/0:16,0:16:45.14:0,45,654	0/0:7,0:7:21.03:0,21,289
chr10	105516363	.	AGAGG	A	1985.73	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.965;DP=524;FS=0.603;HRun=0;HaplotypeScore=94.9624;InbreedingCoeff=0.9801;MQ=89.69;MQ0=1;MQRankSum=-5.083;QD=35.46;ReadPosRankSum=1.446;VQSLOD=3.3697;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.24:0,75,1812	1/1:0,6:6:18.06:318,18,0	0/0:30,0:31:69.18:0,69,1578	0/0:38,0:34:78.04:0,78,1590	0/0:13,0:13:33.11:0,33,847	1/1:2,11:13:27.09:477,27,0	1/1:1,22:23:48.16:847,48,0	0/0:21,0:21:48.16:0,48,1233	0/0:13,0:13:36.12:0,36,924	0/0:14,0:14:33.11:0,33,813	0/0:15,0:15:42.14:0,42,1049	0/0:10,0:10:24.08:0,24,616	0/0:18,0:18:51.18:0,51,1305	0/0:18,0:18:45.15:0,45,1154	0/0:18,0:18:54.19:0,54,1385	0/0:12,0:12:33.11:0,33,848	0/0:33,0:33:72.25:0,72,1840	0/0:16,0:16:48.16:0,48,1231	0/0:17,0:17:42.14:0,42,1068	0/0:13,0:13:33.11:0,33,846	0/0:51,0:51:99:0,111,2640	0/0:19,0:19:54.19:0,54,1366	0/0:15,0:15:45.15:0,45,1144	0/0:25,0:25:54.19:0,54,1386	1/1:3,11:14:30.09:503,30,0	0/0:12,0:12:27.09:0,27,674	0/0:16,0:15:45.15:0,45,1086	0/0:3,0:3:9.03:0,9,229
chr10	105517652	.	CT	C	353.12	PASS	AB=0.913;AC=11;AF=0.212;AN=52;BaseQRankSum=5.161;DP=362;FS=4.639;HRun=15;HaplotypeScore=40.0000;InbreedingCoeff=0.3281;MQ=46.27;MQ0=35;MQRankSum=-0.843;QD=3.84;ReadPosRankSum=0.541;VQSLOD=-0.3753;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,3:36:34.21:0,34,378	1/1:2,3:6:0.41:36,0,0	0/0:5,0:1:0:0,0,0	./.	0/1:10,1:9:13.26:13,0,20	1/1:9,14:22:36.70:234,37,0	0/1:5,3:4:8.49:13,0,8	0/0:33,0:13:32.94:0,33,279	0/0:8,0:8:11.96:0,12,95	0/0:12,0:10:14.97:0,15,125	0/0:15,0:13:20.95:0,21,175	0/0:10,0:9:12:0,12,106	0/0:9,0:7:8.95:0,9,72	0/0:7,0:7:6:0,6,53	0/1:7,0:4:12.31:12,0,20	0/1:11,1:11:0.84:1,0,107	0/0:14,0:12:20.99:0,21,183	0/0:38,0:36:63.89:0,64,477	0/0:15,0:9:3.65:0,4,130	0/0:9,1:11:1.66:0,2,116	0/0:10,0:8:11.97:0,12,99	./.	0/0:5,0:5:12:0,12,105	0/0:6,0:6:7.41:0,7,41	1/1:0,12:12:28.64:179,29,0	0/0:16,0:16:18:0,18,158	0/1:12,0:10:4.32:4,0,77	0/0:7,0:7:20.68:0,21,160
chr10	105518072	.	AG	A	324.97	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.879;DP=735;FS=1.264;HRun=1;HaplotypeScore=68.0588;InbreedingCoeff=0.9971;MQ=89.29;MQ0=0;MQRankSum=-1.376;QD=32.50;ReadPosRankSum=1.627;VQSLOD=3.4378;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,2249	1/1:0,10:10:30.10:419,30,0	0/0:33,0:33:96.28:0,96,1461	0/0:27,0:27:72.20:0,72,1095	0/0:19,0:19:54.18:0,54,860	0/0:18,0:18:54.18:0,54,863	0/0:26,0:26:78.25:0,78,1223	0/0:22,0:22:63.20:0,63,985	0/0:36,0:36:99:0,108,1724	0/0:29,0:29:83.94:0,84,1312	0/0:10,0:10:27.09:0,27,428	0/0:39,0:39:99:0,117,1843	0/0:29,0:29:87.27:0,87,1363	0/0:34,0:34:99:0,102,1627	0/0:32,0:32:96.31:0,96,1512	0/0:24,0:24:72.25:0,72,1151	0/0:36,0:35:99:0,108,1701	0/0:12,0:12:36.12:0,36,575	0/0:25,0:25:75.24:0,75,1163	0/0:22,0:22:60.16:0,60,918	0/0:41,0:41:99:0,123,1936	0/0:11,0:11:33.11:0,33,527	0/0:17,0:17:48.15:0,48,743	0/0:32,0:32:96.29:0,96,1486	0/0:20,0:20:54.18:0,54,863	0/0:35,0:35:99:0,105,1656	0/0:36,0:36:99:0,108,1721	0/0:10,0:10:27.09:0,27,432
chr10	105519203	.	G	GA	1162.99	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.622;DP=502;FS=0.000;HRun=8;HaplotypeScore=50.5944;InbreedingCoeff=0.9427;MQ=60.29;MQ0=8;MQRankSum=1.157;QD=21.54;ReadPosRankSum=1.120;VQSLOD=3.6879;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.04:0,84,768	0/0:8,0:8:18.01:0,18,165	0/0:14,0:6:5.83:0,6,55	0/0:12,0:7:10.52:0,11,92	0/0:18,0:19:46.84:0,47,417	1/1:2,13:15:33.08:370,33,0	1/1:5,10:12:27.08:312,27,0	0/0:44,0:43:99:0,105,952	0/0:10,0:10:30.02:0,30,275	0/0:23,0:23:63.03:0,63,576	0/0:13,0:13:30.01:0,30,274	0/0:19,0:19:54.03:0,54,494	0/0:8,0:8:21.01:0,21,192	0/0:12,0:12:33.01:0,33,301	0/0:17,0:16:47.99:0,48,435	0/0:12,0:12:30:0,30,269	0/0:32,0:32:75:0,75,679	0/0:23,0:23:48.01:0,48,439	0/0:18,0:16:42.01:0,42,381	0/0:13,0:13:33.02:0,33,302	0/0:13,0:13:36.02:0,36,329	0/0:12,0:12:26.99:0,27,243	0/0:13,0:13:36.02:0,36,330	0/0:17,0:17:48.03:0,48,439	1/1:3,21:24:54.16:623,54,0	0/0:27,0:27:72:0,72,649	0/0:23,0:23:66.02:0,66,600	0/0:15,0:15:45.02:0,45,412
chr10	105521190	.	T	TTA	446.62	PASS	AB=1.000;AC=10;AF=0.217;AN=46;BaseQRankSum=1.912;DP=256;FS=15.870;HRun=0;HaplotypeScore=46.0943;InbreedingCoeff=0.4434;MQ=84.88;MQ0=11;MQRankSum=-0.100;QD=4.65;ReadPosRankSum=0.661;VQSLOD=0.6930;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:27.09:0,27,339	1/1:4,0:5:2.98:22,3,0	0/1:39,0:13:19.67:20,0,66	0/1:26,0:11:4.78:5,0,54	0/0:3,0:3:6.02:0,6,75	1/1:2,7:9:15.05:248,15,0	1/1:3,2:5:6.02:99,6,0	0/0:43,0:43:87.27:0,87,1085	./.	0/0:6,0:6:18.06:0,18,227	0/0:4,0:4:9.03:0,9,114	0/0:4,0:4:3.01:0,3,38	./.	./.	0/0:2,0:2:6.02:0,6,75	0/0:4,0:4:12.04:0,12,151	0/0:25,0:25:63.20:0,63,790	0/0:14,0:14:24.08:0,24,301	0/0:10,0:9:18.06:0,18,227	0/0:3,0:3:3.01:0,3,38	0/0:2,0:2:3.01:0,3,38	./.	./.	0/0:3,0:3:3.01:0,3,38	1/1:7,5:12:7.72:187,8,0	0/0:6,0:6:15.05:0,15,189	0/0:2,0:2:3.01:0,3,38	0/0:13,0:13:30.10:0,30,379
chr10	105521212	.	GTA	G	263.70	PASS	AB=0.877;AC=10;AF=0.200;AN=50;BaseQRankSum=5.393;DP=246;FS=6.325;HRun=0;HaplotypeScore=42.7453;InbreedingCoeff=0.6125;MQ=81.34;MQ0=10;MQRankSum=1.063;QD=5.49;ReadPosRankSum=1.679;VQSLOD=1.0735;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:12:0,12,146	1/1:0,3:3:9.03:110,9,0	0/0:15,0:7:2.74:0,3,12	0/1:20,0:9:0.01:0,0,0	0/0:6,0:6:18.06:0,18,294	1/1:9,0:9:13.50:96,14,0	1/1:3,0:2:2.90:17,3,0	0/0:43,0:42:99:0,102,1545	./.	0/0:9,0:9:24.08:0,24,396	0/0:10,0:10:18.06:0,18,289	0/0:3,0:3:9.03:0,9,144	./.	0/0:1,0:1:0:0,0,0	0/0:2,0:2:6.02:0,6,100	0/0:3,0:3:9.03:0,9,151	0/0:23,0:23:51.17:0,51,835	0/0:20,0:19:45.15:0,45,741	0/0:15,0:13:36.12:0,36,597	0/0:8,0:8:21.07:0,21,346	0/0:7,0:7:15.05:0,15,226	0/0:1,0:1:3.01:0,3,50	0/0:5,0:5:15.05:0,15,245	./.	1/1:2,6:8:12.04:153,12,0	0/0:7,0:7:21.07:0,21,350	0/1:3,1:4:26.13:26,0,132	0/0:13,0:10:30.10:0,30,501
chr10	105521279	.	G	GTA	570.95	PASS	AB=0.728;AC=5;AF=0.096;AN=52;BaseQRankSum=-3.575;DP=289;FS=3.635;HRun=0;HaplotypeScore=49.5891;InbreedingCoeff=-0.1373;MQ=54.68;MQ0=2;MQRankSum=2.242;QD=11.20;ReadPosRankSum=-0.134;VQSLOD=3.0306;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:4,14:18:30.13:220,0,30	0/0:3,0:3:3.01:0,3,36	./.	./.	0/0:11,0:11:31.69:0,32,327	0/1:6,4:10:30.25:175,0,30	0/1:3,2:4:27.12:87,0,27	0/0:30,0:30:50.94:0,51,485	0/0:2,0:4:11.60:0,12,99	0/0:8,0:8:18.05:0,18,209	0/0:12,0:16:26.46:0,26,266	0/0:8,0:8:21.05:0,21,240	0/0:9,0:11:32.68:0,33,313	0/0:4,0:4:8.89:0,9,108	0/0:7,0:8:17.89:0,18,195	0/0:2,0:2:6.02:0,6,72	0/0:22,0:23:50.64:0,51,543	0/0:18,0:18:32.65:0,33,318	0/0:10,0:9:15.02:0,15,160	0/0:13,0:13:30.03:0,30,313	0/0:10,0:13:26.59:0,27,267	0/0:2,0:2:3.01:0,3,36	0/1:6,0:7:29.13:29,0,38	0/0:1,0:2:5.81:0,6,49	0/1:5,6:11:51.30:174,0,51	0/0:12,0:14:32.64:0,33,312	0/0:8,0:8:23.99:0,24,258	0/0:19,0:19:51.11:0,51,578
chr10	105522374	.	AT	A	1631.36	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.684;DP=602;FS=15.861;HRun=1;HaplotypeScore=66.3869;InbreedingCoeff=0.9888;MQ=81.76;MQ0=1;MQRankSum=-2.522;QD=29.13;ReadPosRankSum=0.240;VQSLOD=2.0544;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,2103	0/0:4,0:4:12.04:0,12,178	0/0:20,0:20:43.22:0,43,831	0/0:21,0:21:48.31:0,48,932	0/0:25,0:25:72.25:0,72,1151	1/1:2,20:21:50.28:602,50,0	1/1:0,20:20:54.17:670,54,0	0/0:40,0:40:99:0,117,1799	0/0:24,0:24:72.25:0,72,1149	0/0:15,0:15:45.15:0,45,708	0/0:21,0:21:63.16:0,63,935	0/0:18,0:18:54.18:0,54,863	0/0:14,0:14:33.11:0,33,528	0/0:18,0:18:51.17:0,51,814	0/0:22,0:22:66.21:0,66,1031	0/0:18,0:18:48.16:0,48,767	0/0:27,0:27:81.28:0,81,1291	0/0:20,0:20:60.18:0,60,933	0/0:18,0:17:45.11:0,45,671	0/0:14,0:14:42.14:0,42,671	0/0:36,0:36:99:0,108,1718	0/0:18,0:18:54.18:0,54,857	0/0:20,0:20:60.19:0,60,936	0/0:37,0:37:99:0,105,1670	1/1:0,14:14:42.09:503,42,0	0/0:24,0:24:72.24:0,72,1128	0/0:16,0:16:48.16:0,48,763	0/0:10,0:10:30.07:0,30,432
chr10	105522558	.	A	AAG	869.19	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-2.253;DP=507;FS=9.403;HRun=0;HaplotypeScore=99.3918;InbreedingCoeff=0.7924;MQ=64.24;MQ0=12;MQRankSum=-3.081;QD=13.80;ReadPosRankSum=0.439;VQSLOD=3.0061;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:47.96:0,48,495	0/1:9,0:8:24.53:41,0,25	0/0:39,0:14:14.04:0,14,148	0/0:43,0:17:17.38:0,17,155	0/0:13,0:12:24.05:0,24,270	1/1:5,11:16:17.74:253,18,0	1/1:17,6:22:39.03:469,39,0	0/0:24,0:23:39.02:0,39,404	0/0:15,0:15:27.05:0,27,296	0/0:15,0:15:33.09:0,33,391	0/0:12,0:14:10.56:0,11,187	0/0:14,0:14:24.06:0,24,281	0/0:7,0:7:15.05:0,15,181	0/0:13,0:13:17.71:0,18,174	0/0:13,0:13:27.06:0,27,299	0/0:12,0:12:18.03:0,18,189	0/0:17,0:17:36.07:0,36,408	0/0:21,0:20:41.91:0,42,417	0/0:25,0:24:48.10:0,48,533	0/0:20,0:19:48.06:0,48,505	0/0:7,0:7:12.04:0,12,146	0/0:12,0:12:24.06:0,24,272	0/0:20,0:20:35.72:0,36,375	0/0:13,0:13:27.02:0,27,299	1/1:6,7:14:17.95:253,18,0	0/0:23,0:22:48.12:0,48,553	0/0:21,0:21:30.07:0,30,343	0/0:10,0:9:24.07:0,24,285
chr10	105522659	.	ACG	A	221.71	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.598;DP=576;FS=1.397;HRun=0;HaplotypeScore=76.4920;InbreedingCoeff=0.9932;MQ=82.73;MQ0=0;MQRankSum=-2.254;QD=20.16;ReadPosRankSum=-1.463;VQSLOD=3.2560;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.29:0,96,1747	1/1:4,7:11:24.05:315,24,0	0/0:21,0:21:57.12:0,57,979	0/0:24,0:24:66.12:0,66,1134	0/0:26,0:26:75.20:0,75,1349	0/0:23,0:23:60.17:0,60,1072	0/0:28,0:28:78.25:0,78,1438	0/0:24,0:24:69.24:0,69,1285	0/0:17,0:17:48.16:0,48,910	0/0:17,0:17:45.15:0,45,849	0/0:24,0:24:66.21:0,66,1227	0/0:13,0:13:33.11:0,33,612	0/0:15,0:15:45.15:0,45,853	0/0:13,0:13:39.13:0,39,726	0/0:18,0:18:44.99:0,45,864	0/0:17,0:17:48.12:0,48,887	0/0:30,0:30:87.22:0,87,1596	0/0:21,0:21:60.21:0,60,1134	0/0:25,0:25:66.15:0,66,1184	0/0:16,0:16:45.15:0,45,818	0/0:43,0:43:99:0,123,2332	0/0:12,0:12:36.12:0,36,667	0/0:18,0:18:54.18:0,54,1023	0/0:25,0:25:63.20:0,63,1168	0/0:12,0:12:33.09:0,33,602	0/0:25,0:25:72.23:0,72,1340	0/0:16,0:16:48.16:0,48,894	0/0:7,0:7:21.07:0,21,405
chr10	105522713	.	CAA	C	272.47	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.949;DP=623;FS=1.319;HRun=6;HaplotypeScore=75.5341;InbreedingCoeff=0.9979;MQ=83.20;MQ0=1;MQRankSum=-2.200;QD=30.27;ReadPosRankSum=1.756;VQSLOD=3.4240;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,1969	1/1:0,9:9:24.08:366,24,0	0/0:24,0:25:66.21:0,66,1198	0/0:30,0:29:74.92:0,75,1284	0/0:27,0:26:75.26:0,75,1417	0/0:20,0:20:54.15:0,54,1001	0/0:37,0:37:99:0,111,2003	0/0:24,0:24:72.23:0,72,1321	0/0:22,0:22:63.21:0,63,1167	0/0:19,0:19:57.17:0,57,1061	0/0:22,0:22:60.19:0,60,1127	0/0:17,0:17:51.13:0,51,916	0/0:17,0:17:48.16:0,48,911	0/0:21,0:21:63.22:0,63,1208	0/0:21,0:21:57.19:0,57,1056	0/0:19,0:19:54.18:0,54,1005	0/0:26,0:26:72.25:0,72,1352	0/0:15,0:15:42.11:0,42,741	0/0:16,0:16:48.15:0,48,856	0/0:17,0:17:48.16:0,48,918	0/0:36,0:36:99:0,102,1929	0/0:17,0:17:48.16:0,48,907	0/0:18,0:18:51.13:0,51,946	0/0:33,0:33:93.31:0,93,1727	0/0:14,0:14:42.14:0,42,774	0/0:27,0:27:81.27:0,81,1528	0/0:17,0:17:51.16:0,51,942	0/0:20,0:20:60.21:0,60,1158
chr10	105522884	.	CA	C	293.96	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.278;DP=580;FS=1.165;HRun=2;HaplotypeScore=55.2939;InbreedingCoeff=0.9983;MQ=75.83;MQ0=0;MQRankSum=-2.865;QD=24.50;ReadPosRankSum=0.854;VQSLOD=3.4158;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1728	1/1:0,12:12:30.10:388,30,0	0/0:16,0:15:35.55:0,36,554	0/0:14,0:14:33.56:0,34,471	0/0:16,0:16:45.15:0,45,653	0/0:18,0:18:51.15:0,51,723	0/0:26,0:26:78.26:0,78,1165	0/0:32,0:32:93.30:0,93,1354	0/0:15,0:14:42.13:0,42,593	0/0:26,0:26:78.26:0,78,1169	0/0:17,0:17:45.15:0,45,674	0/0:19,0:19:57.19:0,57,852	0/0:21,0:21:63.19:0,63,919	0/0:29,0:29:87.29:0,87,1302	0/0:18,0:18:54.18:0,54,808	0/0:26,0:26:78.26:0,78,1169	0/0:29,0:29:87.26:0,87,1258	0/0:21,0:21:54.18:0,54,806	0/0:24,0:24:72.24:0,72,1060	0/0:23,0:23:60.20:0,60,896	0/0:12,0:12:36.12:0,36,539	0/0:16,0:16:48.16:0,48,718	0/0:12,0:12:36.12:0,36,539	0/0:19,0:19:57.18:0,57,835	0/0:18,0:17:48.14:0,48,697	0/0:32,0:32:96.29:0,96,1382	0/0:19,0:19:57.19:0,57,854	0/0:11,0:10:30.10:0,30,449
chr10	105523284	.	C	CAT	398.71	PASS	AB=0.896;AC=7;AF=0.135;AN=52;BaseQRankSum=-2.272;DP=272;FS=3.974;HRun=0;HaplotypeScore=40.7364;InbreedingCoeff=0.3305;MQ=65.51;MQ0=2;MQRankSum=0.979;QD=9.49;ReadPosRankSum=2.082;VQSLOD=3.0172;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:36.05:0,36,401	0/0:2,0:2:5.36:0,5,23	0/0:6,0:3:6.01:0,6,59	0/0:14,0:6:2.80:0,3,35	0/1:13,0:13:40.50:41,0,169	1/1:7,1:8:12.04:197,12,0	1/1:4,0:4:6.02:98,6,0	0/0:36,0:37:66.02:0,66,773	0/0:7,0:7:12.03:0,12,135	0/0:7,0:7:6.02:0,6,74	0/1:6,0:6:2.95:3,0,65	0/0:7,0:7:14.95:0,15,168	0/0:4,0:4:9.03:0,9,112	0/0:8,0:8:21.05:0,21,246	./.	0/0:7,0:7:18.06:0,18,219	0/0:17,0:17:42.12:0,42,506	0/0:23,0:23:48.15:0,48,588	0/0:15,0:14:21.53:0,22,250	0/0:5,0:5:3.01:0,3,37	./.	0/0:1,0:1:3.01:0,3,37	0/0:6,0:5:6.01:0,6,62	0/0:4,0:4:9:0,9,96	0/1:6,5:10:5.80:182,0,6	0/0:13,0:13:33.10:0,33,409	0/0:13,0:13:27.07:0,27,321	0/0:14,0:14:39.06:0,39,423
chr10	105523651	.	A	AACACACACACACAC	525.65	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=2.751;DP=715;FS=5.138;HRun=0;HaplotypeScore=244.7565;InbreedingCoeff=0.8419;MQ=59.08;MQ0=24;MQRankSum=-0.224;QD=9.22;ReadPosRankSum=-2.218;VQSLOD=1.9391;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:25.19:0,25,3600	0/1:6,0:6:0:0,0,0	0/0:70,0:19:17.90:0,18,340	0/0:71,0:27:33.75:0,34,741	0/0:17,0:17:48.15:0,48,1546	1/1:5,5:16:3.01:202,3,0	1/1:17,0:22:21.79:275,22,0	0/0:29,0:29:81.18:0,81,1711	0/0:24,0:24:69.14:0,69,1915	0/0:29,0:29:78.08:0,78,1757	0/0:15,0:15:36.09:0,36,1300	0/0:29,0:29:87.16:0,87,2490	0/0:8,0:8:21.05:0,21,605	0/0:18,0:18:48.07:0,48,1177	0/0:27,0:27:78.18:0,78,2276	0/0:18,0:18:51.15:0,51,1838	0/0:27,0:27:78.22:0,78,2558	0/0:23,0:23:58.99:0,59,1532	0/0:23,0:22:63.14:0,63,1491	0/0:18,0:18:48.04:0,48,1381	0/0:63,0:63:99:0,162,4963	0/0:14,0:14:27.04:0,27,671	0/0:10,0:10:27.05:0,27,845	0/0:24,0:24:62.84:0,63,2099	1/1:10,1:11:6.01:171,6,0	0/0:23,0:23:63.16:0,63,1660	0/0:26,0:26:75.15:0,75,2152	0/0:9,0:9:27.09:0,27,757
chr10	105526903	.	G	GACTTACTTCAGGCTGTCCC	28658.17	PASS	AB=0.911;AC=51;AF=0.911;AN=56;BaseQRankSum=-3.808;DP=253;FS=27.698;HRun=0;HaplotypeScore=286.3003;InbreedingCoeff=-0.1206;MQ=72.41;MQ0=0;MQRankSum=-2.236;QD=113.27;ReadPosRankSum=1.155;VQSLOD=3.1539;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:26.64:1045,27,0	1/1:4,0:4:9.03:602,9,0	0/1:5,1:10:96.37:1210,0,96	0/1:7,1:8:34.49:694,0,34	1/1:6,0:6:4.69:274,5,0	1/1:11,0:11:30.44:831,30,0	1/1:6,0:6:18.06:982,18,0	1/1:10,0:10:30.09:1760,30,0	1/1:9,0:9:26.99:1180,27,0	1/1:13,0:13:38.94:1645,39,0	0/1:6,0:6:12:349,0,12	1/1:15,0:15:41.95:1368,42,0	1/1:8,0:8:20.07:989,20,0	1/1:13,0:13:33.88:1553,34,0	1/1:6,0:6:18.05:797,18,0	1/1:10,0:10:24.08:1266,24,0	1/1:10,0:10:18.06:1079,18,0	1/1:10,0:10:24.08:1596,24,0	1/1:8,0:8:20.20:997,20,0	1/1:7,0:7:4.35:397,4,0	1/1:6,0:6:15.05:587,15,0	0/1:8,0:8:24.13:246,0,24	1/1:6,0:6:3.04:505,3,0	1/1:9,0:9:21.03:1140,21,0	1/1:13,0:13:23.51:1298,24,0	1/1:12,0:12:25.13:1460,25,0	1/1:13,0:13:33.20:1975,33,0	0/1:6,0:6:33.22:833,0,33
chr10	105530807	.	C	CCTT	4464.30	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.775;DP=691;FS=9.343;HRun=0;HaplotypeScore=93.0445;InbreedingCoeff=0.9836;MQ=83.07;MQ0=0;MQRankSum=-2.149;QD=56.51;ReadPosRankSum=0.198;VQSLOD=6.2706;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1781	1/1:0,4:4:9.03:208,9,0	0/0:22,0:22:57.01:0,57,938	0/0:18,0:18:51.17:0,51,838	0/0:17,0:17:51.17:0,51,869	1/1:3,23:26:60.21:1382,60,0	1/1:1,27:29:75.21:1679,75,0	0/0:30,0:30:81.26:0,81,1321	0/0:27,0:27:81.26:0,81,1353	0/0:24,0:24:63.20:0,63,1028	0/0:16,0:16:45.14:0,45,740	0/0:32,0:32:87.28:0,87,1457	0/0:20,0:20:57.17:0,57,915	0/0:15,0:15:45.13:0,45,715	0/0:33,0:33:84.28:0,84,1408	0/0:31,0:31:93.30:0,93,1559	0/0:36,0:36:99:0,102,1687	0/0:15,0:15:42.12:0,42,688	0/0:29,0:29:78.26:0,78,1302	0/0:20,0:20:57.18:0,57,942	0/0:60,0:60:99:0,169,2757	0/0:17,0:17:51.16:0,51,842	0/0:23,0:23:69.22:0,69,1149	0/0:24,0:24:69.24:0,69,1164	1/1:2,18:20:54.14:1196,54,0	0/0:33,0:33:90.31:0,90,1531	0/0:19,0:19:51.16:0,51,840	0/0:14,0:14:39.08:0,39,561
chr10	105531219	.	TA	T	817.31	PASS	AB=0.875;AC=9;AF=0.161;AN=56;BaseQRankSum=7.204;DP=547;FS=0.000;HRun=11;HaplotypeScore=57.7168;InbreedingCoeff=0.7596;MQ=70.52;MQ0=0;MQRankSum=1.092;QD=10.90;ReadPosRankSum=0.929;VQSLOD=2.7574;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:63.14:0,63,664	1/1:1,4:5:8.99:74,9,0	0/0:14,0:11:2.10:0,2,39	0/1:12,2:9:40.57:41,0,70	0/0:21,0:21:37.81:0,38,528	1/1:1,21:22:41.95:345,42,0	1/1:3,10:13:20.97:172,21,0	0/0:33,0:33:87.19:0,87,908	0/0:15,0:15:44.76:0,45,429	0/0:33,0:33:75.17:0,75,786	0/0:23,0:23:45.11:0,45,479	0/0:12,0:12:30.06:0,30,312	0/0:10,1:12:1.65:0,2,257	0/0:17,0:17:36.01:0,36,369	0/0:21,0:21:57.14:0,57,608	0/0:23,0:24:47.95:0,48,494	0/0:20,0:20:39.06:0,39,395	0/0:17,0:18:44.93:0,45,453	0/0:21,1:23:45.06:0,45,482	0/0:31,1:32:53.52:0,54,761	0/0:11,0:11:18.03:0,18,185	0/0:14,0:14:33.06:0,33,339	0/0:23,0:23:54.14:0,54,576	0/0:18,0:18:45.11:0,45,480	1/1:5,16:21:41.94:345,42,0	0/0:25,1:26:38.50:0,39,603	0/0:21,0:21:51.12:0,51,538	0/0:14,0:14:39.10:0,39,416
chr10	105532110	.	G	GC	1641.73	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=-8.470;DP=394;FS=3.689;HRun=0;HaplotypeScore=54.7978;InbreedingCoeff=0.8756;MQ=70.57;MQ0=0;MQRankSum=-1.396;QD=25.26;ReadPosRankSum=3.872;VQSLOD=4.3100;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:29.89:0,30,316	1/1:0,7:7:9.03:124,9,0	0/0:9,0:10:29.65:0,30,292	0/0:14,0:13:28.45:0,28,270	0/0:7,0:7:21.01:0,21,253	1/1:0,14:14:33.11:458,33,0	1/1:2,38:40:81.26:1116,81,0	0/0:18,0:18:33.43:0,33,311	0/0:11,0:11:28.15:0,28,279	0/0:8,0:8:12.03:0,12,141	./.	0/0:17,0:17:48.02:0,48,561	0/0:12,0:12:31.34:0,31,267	0/0:23,0:23:50.40:0,50,528	0/0:19,0:19:54.08:0,54,646	0/0:21,0:21:49.86:0,50,489	0/0:32,0:32:90.02:0,90,979	0/0:23,0:23:66.05:0,66,782	0/0:8,0:8:23.88:0,24,263	0/0:5,0:5:9.50:0,10,126	0/0:20,0:20:42.08:0,42,503	0/0:3,0:3:5.04:0,5,48	0/0:8,0:8:8.92:0,9,81	0/0:26,0:26:62.96:0,63,698	1/1:2,2:4:8.61:93,9,0	0/0:13,0:13:21.06:0,21,281	0/0:14,0:14:38.09:0,38,442	0/0:3,0:3:8.93:0,9,78
chr10	105533600	.	AG	A	2244.23	PASS	AB=0.917;AC=21;AF=0.375;AN=56;BaseQRankSum=7.261;DP=540;FS=1.891;HRun=11;HaplotypeScore=64.9775;InbreedingCoeff=0.8410;MQ=77.14;MQ0=0;MQRankSum=-1.886;QD=11.33;ReadPosRankSum=3.645;VQSLOD=3.3585;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,2:38:21.63:0,22,539	1/1:5,9:14:7.16:169,7,0	0/0:21,0:17:8.48:0,8,120	0/0:19,0:18:8.50:0,8,272	0/1:20,2:22:13.35:13,0,248	1/1:11,3:14:14.88:114,15,0	1/1:4,18:22:47.94:394,48,0	0/0:29,2:30:9.70:0,10,416	0/0:15,0:15:30.06:0,30,313	0/0:12,1:13:9.68:0,10,292	0/0:23,0:23:33.04:0,33,324	0/0:13,0:13:30.07:0,30,314	1/1:6,12:18:26.63:221,27,0	1/1:3,11:14:23.85:197,24,0	0/0:21,1:22:17.48:0,17,391	0/0:21,2:24:29.45:0,29,494	0/0:25,0:25:57.09:0,57,577	0/0:13,0:13:30.03:0,30,301	1/1:11,6:17:15.40:121,15,0	1/1:12,5:17:24:198,24,0	1/1:6,17:23:22.23:300,22,0	0/0:17,0:17:11.19:0,11,247	0/0:19,0:19:14.35:0,14,272	0/0:18,0:18:21.38:0,21,330	1/1:9,10:19:44.80:354,45,0	0/0:26,0:26:39.06:0,39,394	1/1:1,16:18:46.98:375,47,0	0/0:5,0:5:3.01:0,3,32
chr10	105534335	.	T	TCC	733.49	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=0.234;DP=573;FS=10.720;HRun=9;HaplotypeScore=74.1890;InbreedingCoeff=0.9189;MQ=73.38;MQ0=0;MQRankSum=-1.191;QD=13.58;ReadPosRankSum=-2.072;VQSLOD=0.2366;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,121,1269	0/0:9,0:9:15:0,15,160	0/0:22,0:22:49.80:0,50,488	0/0:19,0:18:45.17:0,45,413	0/0:20,0:21:38.85:0,39,469	1/1:4,13:19:23.05:295,23,0	1/1:7,15:26:12.23:477,12,0	0/0:25,0:25:45.03:0,45,478	0/0:23,0:25:51.06:0,51,598	0/0:18,0:18:42.09:0,42,447	0/0:12,0:14:9.47:0,9,228	0/0:23,0:23:60.08:0,60,624	0/0:15,0:15:36.06:0,36,380	0/0:20,0:20:51.10:0,51,542	0/0:16,0:16:36.06:0,36,383	0/0:26,0:26:69.14:0,69,726	0/0:21,0:21:54.09:0,54,564	0/0:11,0:11:30.07:0,30,319	0/0:19,0:20:35.61:0,36,345	0/0:23,0:23:51.09:0,51,542	0/0:30,0:30:81.15:0,81,846	0/0:13,0:13:33.07:0,33,351	0/0:18,0:18:45.09:0,45,470	0/0:20,0:20:59.36:0,59,613	1/1:5,4:9:6.02:92,6,0	0/0:22,0:22:57.13:0,57,605	0/0:27,0:28:60.09:0,60,694	0/0:7,0:9:14.73:0,15,195
chr10	105537374	.	CTCTCTTTCTTTCTT	C	1752.76	PASS	AB=0.538;AC=5;AF=0.089;AN=56;BaseQRankSum=6.041;DP=612;FS=0.000;HRun=0;HaplotypeScore=210.1569;InbreedingCoeff=0.7852;MQ=55.62;MQ0=9;MQRankSum=-5.822;QD=33.07;ReadPosRankSum=2.412;VQSLOD=2.2398;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:81.28:0,81,3809	0/0:0,0:7:17.68:0,18,342	0/0:6,0:2:6.02:0,6,178	0/0:11,0:2:6.02:0,6,156	0/0:22,0:22:25.91:0,26,2645	1/1:1,23:23:18.06:759,18,0	0/1:2,12:14:2.47:489,0,2	0/0:25,0:19:53.96:0,54,1875	0/0:32,0:32:90.30:0,90,4460	0/0:31,0:31:90.26:0,90,3835	0/0:21,0:21:57.20:0,57,2853	0/0:19,0:19:51.07:0,51,2412	0/0:19,0:19:51.17:0,51,2937	0/0:20,0:19:48.16:0,48,2312	0/0:30,0:30:87.30:0,87,5051	0/0:24,0:24:69.22:0,69,2792	0/0:29,0:29:75.26:0,75,4153	0/0:32,0:32:90.27:0,90,4510	0/0:16,0:10:27.98:0,28,1182	0/0:26,0:25:73.79:0,74,3192	0/0:11,0:11:30.10:0,30,1473	0/0:23,0:23:66.23:0,66,3496	0/0:15,0:15:45.15:0,45,2352	0/0:33,0:33:93.30:0,93,4775	1/1:1,14:15:15.05:630,15,0	0/0:25,0:25:72.25:0,72,3332	0/0:35,0:35:96.29:0,96,4650	0/0:15,0:15:39.13:0,39,1944
chr10	105538896	.	T	TA	334.19	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.597;DP=594;FS=17.684;HRun=5;HaplotypeScore=73.7233;InbreedingCoeff=0.8588;MQ=61.37;MQ0=4;MQRankSum=0.357;QD=27.85;ReadPosRankSum=1.261;VQSLOD=2.0587;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:59.93:0,60,610	1/1:6,6:12:33.11:429,33,0	0/0:35,0:12:26.40:0,26,227	0/0:36,0:14:5:0,5,121	0/0:41,0:41:97.04:0,97,1006	0/0:15,0:15:40.53:0,41,401	0/0:17,0:17:42.09:0,42,450	0/0:33,0:33:90.21:0,90,958	0/0:24,0:24:59.78:0,60,584	0/0:20,0:20:57.14:0,57,609	0/0:25,0:25:62.16:0,62,621	0/0:14,0:14:36.14:0,36,361	0/0:14,0:14:38.95:0,39,389	0/0:13,0:13:28.61:0,29,284	0/0:16,0:16:41.23:0,41,412	0/0:11,0:11:27.06:0,27,289	0/0:31,0:31:84.11:0,84,871	0/0:32,0:32:68.99:0,69,649	0/0:23,0:23:56.52:0,57,564	0/0:25,0:25:69.15:0,69,728	0/0:11,0:11:27.06:0,27,285	0/0:5,0:5:12.03:0,12,129	0/0:18,0:18:45.11:0,45,480	0/0:19,0:19:43.89:0,44,446	0/0:22,0:21:48.09:0,48,499	0/0:25,0:25:66.15:0,66,698	0/0:21,0:21:57.96:0,58,601	0/0:9,0:9:22.87:0,23,229
chr10	105538906	.	GAA	G	921.41	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=2.926;DP=604;FS=2.812;HRun=14;HaplotypeScore=79.7822;InbreedingCoeff=0.8270;MQ=61.69;MQ0=7;MQRankSum=3.024;QD=10.02;ReadPosRankSum=1.220;VQSLOD=2.5127;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:28:63.56:0,64,666	0/0:8,0:13:24.95:0,25,86	0/0:38,0:12:12.33:0,12,112	0/1:37,0:11:11.06:11,0,27	0/0:33,1:41:74.33:0,74,1023	1/1:4,13:17:36.01:333,36,0	1/1:2,13:16:35.77:364,36,0	0/0:35,0:38:64.60:0,65,722	0/0:19,0:22:53.13:0,53,632	0/0:19,0:21:35.60:0,36,445	0/0:24,0:28:62.16:0,62,765	0/0:12,0:12:29.16:0,29,333	0/0:15,0:15:36.11:0,36,488	0/0:16,0:16:34.65:0,35,439	0/0:16,0:17:42.08:0,42,536	0/0:7,0:11:23.04:0,23,237	0/0:26,1:30:54.96:0,55,987	0/0:26,1:28:28.97:0,29,799	0/0:19,0:21:44.62:0,45,538	0/0:24,0:26:56.62:0,57,668	0/0:10,0:11:18.04:0,18,221	0/0:6,0:6:12.04:0,12,160	0/0:14,0:15:35.60:0,36,463	0/0:11,0:13:35.08:0,35,405	1/1:6,16:21:39.02:361,39,0	0/0:23,0:24:58.96:0,59,714	0/0:22,0:25:43.99:0,44,511	0/0:12,0:12:30.08:0,30,400
chr10	105540886	.	TCACACA	T	181.71	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=4.573;DP=603;FS=1.407;HRun=0;HaplotypeScore=144.4794;InbreedingCoeff=0.8290;MQ=49.55;MQ0=17;MQRankSum=-2.386;QD=4.33;ReadPosRankSum=-4.034;VQSLOD=0.8768;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:39:22.33:0,22,590	0/0:13,0:13:26.95:0,27,398	./.	./.	0/0:26,0:25:35.68:0,36,779	1/1:2,14:15:6.02:106,6,0	1/1:18,0:17:5.38:125,5,0	0/0:24,0:12:26.95:0,27,342	0/0:24,0:24:45.01:0,45,1018	0/0:20,0:19:47.08:0,47,1047	0/0:29,0:29:16.04:0,16,730	0/0:19,0:19:42.11:0,42,933	0/0:10,0:10:21.07:0,21,588	0/0:19,0:17:23.73:0,24,487	0/0:27,0:26:54.09:0,54,1296	0/0:17,0:17:33.71:0,34,816	0/0:34,0:33:61.40:0,61,1404	0/0:27,0:26:59.35:0,59,1134	0/0:17,0:13:29.87:0,30,520	0/0:32,0:32:46.95:0,47,1379	0/0:20,0:18:24.08:0,24,571	0/0:31,0:30:48.63:0,49,1251	0/0:25,0:25:26.71:0,27,664	0/0:36,0:36:62.79:0,63,1492	1/1:8,0:8:3.01:63,3,0	0/0:28,0:27:69.05:0,69,1443	0/0:24,0:24:43.66:0,44,927	0/0:9,0:9:27.09:0,27,774
chr10	105540913	.	CAT	C	67.38	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=7.708;DP=688;FS=3.382;HRun=0;HaplotypeScore=106.4263;InbreedingCoeff=0.6100;MQ=52.45;MQ0=21;MQRankSum=-1.463;QD=1.73;ReadPosRankSum=-0.542;VQSLOD=1.8908;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:37:33.69:0,34,575	1/1:15,1:16:22.92:160,23,0	0/1:23,0:6:0.04:0,0,45	0/0:19,0:5:1.89:0,2,40	0/0:29,0:28:43.70:0,44,539	0/0:18,0:17:11.08:0,11,95	0/0:23,0:21:21.84:0,22,211	0/0:30,0:26:67.17:0,67,557	0/0:21,0:21:47.64:0,48,609	0/0:24,0:23:22.20:0,22,621	0/0:25,0:25:20.01:0,20,463	0/0:21,0:21:21.95:0,22,535	0/0:19,0:19:10.45:0,10,414	0/0:13,0:11:25.52:0,26,254	0/0:28,0:27:60.59:0,61,827	0/0:21,0:21:20.81:0,21,504	0/0:39,0:38:53.76:0,54,911	0/0:28,0:28:31.25:0,31,533	0/0:23,0:21:20.53:0,21,335	0/0:29,0:29:61.59:0,62,795	0/0:28,0:27:50.07:0,50,557	0/0:35,0:34:28.40:0,28,808	0/0:30,0:30:27.21:0,27,395	0/0:28,0:28:14.59:0,15,658	0/0:17,0:17:26.19:0,26,206	0/0:26,5:30:19.64:0,20,692	0/0:19,0:19:25.02:0,25,502	0/0:11,0:11:32.78:0,33,443
chr10	105541510	.	TCA	T	484.14	PASS	AB=0.971;AC=20;AF=0.385;AN=52;BaseQRankSum=3.655;DP=604;FS=24.496;HRun=0;HaplotypeScore=102.7268;InbreedingCoeff=-0.2572;MQ=49.60;MQ0=23;MQRankSum=2.137;QD=1.20;ReadPosRankSum=-0.140;VQSLOD=0.4046;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:35:68.36:68,0,145	1/1:5,0:7:2.84:14,3,0	./.	./.	0/0:17,5:22:17.87:0,18,153	0/1:19,0:20:8.10:70,0,8	1/1:27,0:25:8.72:51,9,0	0/1:16,0:14:11.80:12,0,36	0/1:27,1:27:10.34:10,0,187	0/0:23,0:22:20.56:0,21,259	0/1:14,0:14:13.51:14,0,120	0/1:22,15:36:7.10:7,0,32	0/1:18,0:18:40.72:41,0,165	0/1:29,0:29:43.78:44,0,192	0/1:25,1:25:57.92:58,0,111	0/0:25,0:25:6.03:0,6,249	0/1:34,0:34:54.69:55,0,310	0/0:26,0:25:6.35:0,6,250	0/0:18,0:17:20.96:0,21,142	0/0:17,0:16:8:0,8,60	0/1:35,0:34:14.42:14,0,136	0/1:12,0:12:12.67:13,0,40	0/0:14,0:13:1.85:0,2,47	0/1:30,0:29:43.68:44,0,203	1/1:15,1:16:5.96:52,6,0	0/0:24,0:25:4.67:0,5,176	0/1:19,0:19:69.52:70,0,74	0/0:5,0:5:3.01:0,3,45
chr10	105545267	.	CCTCGGCGAGAGA	C	5472.50	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.149;DP=671;FS=9.925;HRun=0;HaplotypeScore=229.1369;InbreedingCoeff=0.9998;MQ=91.02;MQ0=0;MQRankSum=-10.892;QD=85.51;ReadPosRankSum=1.549;VQSLOD=3.4453;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,151,8545	0/0:16,0:16:45.15:0,45,2526	0/0:25,0:24:62.61:0,63,3262	0/0:32,0:32:78.30:0,78,3078	0/0:32,0:32:93.28:0,93,4605	1/1:1,20:21:54.13:1957,54,0	1/1:4,23:27:54.19:2052,54,0	0/0:23,0:23:66.18:0,66,3597	0/0:26,0:26:72.23:0,72,4020	0/0:21,0:21:60.21:0,60,3351	0/0:11,0:11:33.09:0,33,1418	0/0:24,0:24:69.15:0,69,3710	0/0:13,0:13:39.13:0,39,2244	0/0:26,0:26:66.21:0,66,3739	0/0:25,0:25:72.25:0,72,4012	0/0:21,0:21:63.22:0,63,3725	0/0:25,0:25:69.22:0,69,3894	0/0:25,0:25:69.19:0,69,3898	0/0:22,0:22:63.16:0,63,3065	0/0:18,0:18:45.15:0,45,2195	0/0:56,0:56:99:0,166,8995	0/0:14,0:14:36.08:0,36,1781	0/0:14,0:14:39.12:0,39,2045	0/0:30,0:30:87.28:0,87,4600	1/1:0,16:16:39.13:1464,39,0	0/0:24,0:24:72.22:0,72,3742	0/0:19,0:18:54.16:0,54,2994	0/0:14,0:14:42.14:0,42,2558
chr10	105545833	.	T	TTG	3022.17	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.464;DP=658;FS=6.251;HRun=0;HaplotypeScore=84.6169;InbreedingCoeff=0.9860;MQ=81.05;MQ0=2;MQRankSum=0.057;QD=41.97;ReadPosRankSum=0.902;VQSLOD=5.4364;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.23:0,81,1023	0/0:6,0:6:18.06:0,18,234	0/0:26,0:25:62.96:0,63,822	0/0:23,0:22:42.78:0,43,556	0/0:29,0:29:69.13:0,69,851	1/1:2,20:22:60.21:1020,60,0	1/1:5,27:32:81.28:1364,81,0	0/0:29,0:28:54.17:0,54,702	0/0:21,0:21:51.17:0,51,663	0/0:18,0:18:51.16:0,51,652	0/0:17,0:17:42.08:0,42,514	0/0:30,0:30:78.08:0,78,989	0/0:22,0:22:57.18:0,57,740	0/0:22,0:22:57.15:0,57,700	0/0:29,0:29:81.26:0,81,1053	0/0:17,0:17:45.15:0,45,585	0/0:34,0:34:90.27:0,90,1153	0/0:25,0:25:63.17:0,63,801	0/0:14,0:14:36.10:0,36,443	0/0:15,0:15:45.10:0,45,554	0/0:41,0:40:99:0,108,1365	0/0:14,0:14:42.03:0,42,492	0/0:19,0:19:48.11:0,48,604	0/0:36,0:36:87.28:0,87,1131	1/1:1,16:18:12.15:777,12,0	0/0:35,0:35:71.32:0,71,1183	0/0:22,0:22:51.16:0,51,662	0/0:11,0:11:30.06:0,30,359
chr10	105546054	.	C	CT	1444.37	PASS	AB=0.941;AC=22;AF=0.393;AN=56;BaseQRankSum=-0.160;DP=636;FS=2.604;HRun=13;HaplotypeScore=126.5126;InbreedingCoeff=0.4996;MQ=60.36;MQ0=12;MQRankSum=-1.069;QD=4.70;ReadPosRankSum=-3.195;VQSLOD=1.4538;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:28,2:28:25.45:25,0,249	1/1:4,0:5:5.81:34,6,0	0/0:66,0:23:7.67:0,8,141	0/1:56,0:15:20.97:21,0,30	0/0:22,1:25:30.60:0,31,196	1/1:1,0:14:8.52:43,9,0	1/1:20,0:29:35.46:189,35,0	1/1:27,8:33:30.84:301,31,0	0/0:15,0:16:34.73:0,35,231	0/0:23,1:24:13.71:0,14,239	0/0:15,1:16:2.13:0,2,173	0/0:14,0:14:32.53:0,33,206	0/1:12,0:12:11.68:12,0,62	0/0:11,0:11:14.56:0,15,93	0/0:27,1:30:33.83:0,34,370	0/0:19,0:19:40.97:0,41,271	0/0:22,1:23:25.13:0,25,294	0/1:11,0:12:3.02:3,0,77	1/1:22,7:28:6.70:306,7,0	1/1:6,9:17:13.64:256,14,0	1/1:3,3:5:9:80,9,0	0/0:16,0:17:10.42:0,10,149	0/0:18,1:19:7.71:0,8,195	0/1:20,2:23:31.58:32,0,209	1/1:12,0:15:18.89:85,19,0	0/0:29,0:29:50.15:0,50,338	0/1:16,5:22:1.79:249,0,2	0/0:17,0:18:46.62:0,47,310
chr10	105546087	.	CTT	C	11840.53	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.263;DP=361;FS=3.342;HRun=3;HaplotypeScore=96.6201;InbreedingCoeff=0.8217;MQ=49.99;MQ0=4;MQRankSum=-1.833;QD=35.99;ReadPosRankSum=2.525;VQSLOD=4.5835;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:22:57.17:848,57,0	1/1:0,2:2:6.02:92,6,0	0/0:19,0:12:21.09:0,21,261	0/0:13,0:3:5.97:0,6,44	1/1:4,22:26:51.04:751,51,0	1/1:0,7:7:18.06:275,18,0	1/1:1,14:15:36.12:550,36,0	1/1:2,10:11:27.09:413,27,0	1/1:0,9:8:24.08:367,24,0	1/1:1,23:23:66.22:991,66,0	1/1:0,10:10:21.07:321,21,0	1/1:0,6:6:15.05:219,15,0	1/1:0,7:7:21.07:320,21,0	1/1:0,6:6:15.05:228,15,0	1/1:1,19:20:57.19:858,57,0	1/1:1,13:14:36.12:550,36,0	1/1:1,18:17:45.15:688,45,0	1/1:0,8:8:15.05:218,15,0	1/1:0,13:13:36.12:551,36,0	1/1:1,13:13:33.11:503,33,0	1/1:0,7:7:9.50:139,10,0	1/1:0,17:15:33.11:503,33,0	1/1:1,14:15:36.12:548,36,0	1/1:1,13:14:23.45:354,23,0	1/1:0,8:8:15.05:229,15,0	1/1:0,15:15:36.12:549,36,0	1/1:2,11:13:36.12:548,36,0	1/1:0,5:5:15.05:226,15,0
chr10	105546096	.	CT	C	10706.94	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.077;DP=387;FS=0.000;HRun=2;HaplotypeScore=98.8690;InbreedingCoeff=0.7098;MQ=42.51;MQ0=2;MQRankSum=-0.034;QD=29.17;ReadPosRankSum=2.990;VQSLOD=4.4644;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:26:60.20:777,60,0	1/1:0,2:2:6.02:78,6,0	0/0:9,0:5:9.19:0,9,77	0/0:11,0:2:0.89:0,1,2	1/1:1,25:26:48.15:617,48,0	1/1:3,7:10:27.07:336,27,0	1/1:0,17:17:39.12:494,39,0	1/1:1,13:14:36.12:467,36,0	1/1:0,11:10:27.09:350,27,0	1/1:0,25:24:69.22:895,69,0	1/1:2,8:10:18.06:233,18,0	1/1:1,8:9:15.05:194,15,0	1/1:2,7:9:27.09:350,27,0	1/1:0,6:6:15.05:194,15,0	1/1:2,21:23:54.18:699,54,0	1/1:0,14:14:39.13:505,39,0	1/1:1,17:17:42.14:544,42,0	1/1:2,8:10:12.04:155,12,0	1/1:0,16:16:45.15:584,45,0	1/1:0,15:14:36.12:458,36,0	1/1:0,8:7:9:117,9,0	1/1:0,17:15:33.11:422,33,0	1/1:0,17:17:39.13:501,39,0	1/1:2,16:18:30.51:389,31,0	1/1:0,10:10:18.06:233,18,0	1/1:1,14:15:36.11:457,36,0	1/1:0,14:14:39.13:505,39,0	1/1:2,3:5:12.04:155,12,0
chr10	105548507	.	G	GCA	735.25	PASS	AB=0.779;AC=5;AF=0.100;AN=50;BaseQRankSum=-2.353;DP=615;FS=0.773;HRun=0;HaplotypeScore=88.8584;InbreedingCoeff=-0.1198;MQ=54.08;MQ0=14;MQRankSum=1.552;QD=7.35;ReadPosRankSum=1.947;VQSLOD=3.2435;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:37:74.20:0,74,790	./.	./.	./.	0/1:16,0:16:18.20:18,0,249	0/1:3,15:19:22.60:279,0,23	0/1:18,16:34:46.93:261,0,47	0/0:16,0:17:23.83:0,24,221	0/0:18,0:20:35.67:0,36,361	0/0:26,0:26:36.99:0,37,449	0/0:11,0:12:26.89:0,27,275	0/0:13,0:11:15.04:0,15,174	0/0:22,0:23:44.26:0,44,457	0/0:11,0:11:24.07:0,24,283	0/0:11,0:10:19.57:0,20,201	0/1:12,0:12:33.25:33,0,235	0/0:34,0:36:65.02:0,65,665	0/0:30,0:33:62.64:0,63,671	0/0:15,0:11:17.96:0,18,178	0/0:8,0:9:14.88:0,15,156	0/0:72,1:81:99:0,121,1616	0/0:16,0:16:21.01:0,21,213	0/0:15,0:16:29.92:0,30,331	0/0:52,0:54:99:0,116,1279	0/1:9,10:19:64.82:258,0,65	0/0:20,0:23:29.90:0,30,444	0/0:11,0:10:3:0,3,36	0/0:9,0:9:21.06:0,21,248
chr10	105549867	.	CTT	C	390.46	PASS	AB=0.799;AC=17;AF=0.304;AN=56;BaseQRankSum=9.897;DP=411;FS=2.274;HRun=3;HaplotypeScore=83.2677;InbreedingCoeff=-0.4127;MQ=46.36;MQ0=1;MQRankSum=-1.428;QD=1.70;ReadPosRankSum=1.844;VQSLOD=-0.6276;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,4:22:6.31:0,6,667	0/1:2,2:4:47.04:47,0,104	0/0:9,0:7:15.05:0,15,272	0/1:8,0:3:5.31:5,0,165	0/1:9,8:17:52.74:53,0,162	0/1:11,2:13:20.57:21,0,384	0/0:25,6:31:6.20:0,6,608	0/1:13,3:16:47.92:48,0,524	0/0:17,1:18:19.72:0,20,551	0/1:21,6:27:68.83:69,0,936	0/1:7,11:18:17.52:18,0,67	0/1:8,5:13:43.32:43,0,237	0/1:9,2:11:25.84:26,0,227	0/0:10,0:10:21.08:0,21,273	0/1:7,4:11:53.80:54,0,188	0/1:6,4:10:46.70:47,0,149	0/0:15,1:16:38.96:0,39,704	0/1:7,1:8:7.78:8,0,360	0/1:14,2:16:17.84:18,0,577	0/1:10,3:13:0.47:0,0,100	0/0:12,0:12:29.76:0,30,268	0/0:17,7:24:21.34:0,21,386	0/1:10,2:12:0.64:1,0,297	0/0:17,0:17:26.09:0,26,366	0/1:16,3:19:15.32:15,0,477	0/0:17,3:20:9.74:0,10,777	0/1:9,4:12:67.58:68,0,285	0/0:2,0:2:6.02:0,6,107
chr10	105549875	.	C	CT	751.50	PASS	AB=0.805;AC=18;AF=0.321;AN=56;BaseQRankSum=10.904;DP=475;FS=12.399;HRun=0;HaplotypeScore=83.6773;InbreedingCoeff=-0.4669;MQ=55.17;MQ0=1;MQRankSum=-7.111;QD=2.46;ReadPosRankSum=1.979;VQSLOD=1.7323;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,4:26:9.58:0,10,741	0/1:2,2:4:51.60:52,0,68	0/0:15,0:13:35.60:0,36,373	0/0:14,0:8:26.32:0,26,285	0/1:11,8:19:60.47:60,0,314	0/1:12,2:14:25.43:25,0,381	0/1:26,6:32:7.95:8,0,788	0/1:16,3:19:51.26:51,0,457	0/0:20,1:21:14.28:0,14,629	0/1:22,7:29:99:137,0,711	0/1:9,10:21:82.65:83,0,217	0/1:8,5:13:64.21:64,0,269	0/1:11,2:13:19.50:19,0,376	0/1:10,0:10:3.04:3,0,314	0/1:7,5:12:93.21:93,0,146	0/1:9,5:14:89.61:90,0,189	0/0:18,1:19:4.87:0,5,622	0/1:11,1:12:3.37:3,0,338	0/1:14,3:17:62.40:62,0,406	0/0:13,3:16:8.41:0,8,294	0/0:14,0:14:39.02:0,39,480	0/1:18,7:25:18.47:18,0,462	0/1:13,2:15:5.03:5,0,322	0/0:19,0:19:32.43:0,32,406	0/1:18,4:22:49.88:50,0,557	0/0:19,3:22:3.53:0,4,632	0/1:10,4:13:77.80:78,0,290	0/0:4,0:4:12.04:0,12,168
chr10	105549881	.	CTTT	C	333.02	PASS	AB=0.827;AC=11;AF=0.196;AN=56;BaseQRankSum=9.503;DP=509;FS=11.948;HRun=5;HaplotypeScore=107.3629;InbreedingCoeff=-0.2569;MQ=59.69;MQ0=1;MQRankSum=-7.602;QD=1.73;ReadPosRankSum=1.738;VQSLOD=-0.6722;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,3:26:14.72:0,15,1359	0/1:4,1:5:16.32:16,0,183	0/0:16,0:14:42:0,42,778	0/0:19,0:13:37.42:0,37,675	0/0:12,7:19:5.09:0,5,605	0/0:13,1:14:8.56:0,9,655	0/0:29,5:34:21.76:0,22,1505	0/1:16,2:18:53.60:54,0,758	0/0:21,1:22:27.19:0,27,1088	0/1:24,7:32:99:110,0,1437	0/1:12,10:22:65.19:65,0,508	0/0:11,2:13:8.90:0,9,483	0/0:12,2:14:9.87:0,10,754	0/0:12,0:12:32.94:0,33,690	0/1:8,4:12:28.75:29,0,381	0/1:11,5:16:26.18:26,0,666	0/0:20,0:20:54.19:0,54,1205	0/1:12,1:13:10.37:10,0,742	0/1:15,3:18:99:104,0,607	0/1:13,3:16:3.41:3,0,591	0/0:16,0:16:42.08:0,42,863	0/0:19,6:25:36.02:0,36,826	0/0:15,2:17:35.12:0,35,771	0/0:22,0:22:31.13:0,31,600	0/0:21,3:24:5.83:0,6,1099	0/1:21,3:24:23.60:24,0,1183	0/1:13,3:15:34.86:35,0,653	0/0:4,0:4:12.04:0,12,277
chr10	105550102	.	C	CCATGCATCCACATGCATC	3227.04	PASS	AB=1.000;AC=6;AF=0.111;AN=54;BaseQRankSum=7.330;DP=680;FS=16.526;HRun=0;HaplotypeScore=325.2586;InbreedingCoeff=0.6025;MQ=83.65;MQ0=0;MQRankSum=-7.854;QD=47.46;ReadPosRankSum=-1.157;VQSLOD=1.2931;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,105,4724	1/1:4,0:11:15.05:367,15,0	0/0:21,0:21:48.13:0,48,1788	0/0:29,0:29:42.07:0,42,1310	0/0:24,0:24:54.17:0,54,2349	1/1:4,1:14:12.04:822,12,0	0/1:35,0:35:49.32:1957,0,49	0/0:26,0:26:63.19:0,63,2251	0/0:29,0:29:78.26:0,78,3400	0/0:19,0:19:42.14:0,42,1680	0/0:15,0:15:24.07:0,24,1011	0/0:24,0:24:66.23:0,66,3131	0/0:26,0:26:63.22:0,63,2825	0/0:22,0:22:57.20:0,57,2624	0/0:19,0:19:57.20:0,57,2654	0/0:25,0:25:60.21:0,60,2778	0/0:31,0:31:81.26:0,81,3636	0/0:18,0:18:45.15:0,45,2131	0/0:30,0:30:57.13:0,57,2138	0/0:21,0:21:39.13:0,39,1708	0/0:43,0:43:99:0,111,5099	0/0:29,0:29:75.19:0,75,2931	0/0:13,0:13:33.10:0,33,1404	0/0:40,0:40:99:0,105,4578	0/1:8,0:8:60.20:211,0,60	0/0:36,0:36:96.30:0,96,4028	0/0:32,0:32:81.28:0,81,3573	./.
chr10	105550714	.	GCA	G	1047.03	PASS	AB=0.808;AC=32;AF=0.615;AN=52;BaseQRankSum=0.289;DP=460;FS=5.128;HRun=0;HaplotypeScore=73.2304;InbreedingCoeff=0.3187;MQ=67.97;MQ0=17;MQRankSum=0.810;QD=3.27;ReadPosRankSum=4.807;VQSLOD=1.0467;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:25:14.87:142,15,0	1/1:7,0:9:2.84:14,3,0	./.	./.	1/1:6,1:7:3.01:32,3,0	1/1:9,0:18:5.55:28,6,0	1/1:27,0:29:2.84:14,3,0	0/0:19,0:18:0:0,0,0	1/1:15,0:14:9.01:88,9,0	0/0:12,0:12:3.01:0,3,44	0/0:10,0:9:5.97:0,6,81	0/1:17,2:21:26.36:106,0,26	0/0:6,3:9:3.90:0,4,38	0/0:15,0:17:5.51:0,6,33	1/1:6,5:12:8.79:78,9,0	0/1:11,2:12:23.06:23,0,64	0/1:14,6:18:49.77:50,0,50	1/1:19,6:26:14.73:142,15,0	0/0:11,0:9:3.01:0,3,36	1/1:9,3:12:3.01:32,3,0	0/1:28,9:37:2.05:27,0,2	1/1:7,2:7:3.01:32,3,0	1/1:5,2:8:2.04:6,2,0	1/1:16,13:31:29.61:284,30,0	1/1:9,0:11:1.93:6,2,0	0/0:9,0:17:16.73:0,17,134	1/1:8,6:14:9.02:96,9,0	0/0:8,0:6:6.44:0,6,49
chr10	105551838	.	G	GGGAA	4129	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-4.650;DP=685;FS=6.947;HRun=0;HaplotypeScore=115.8381;InbreedingCoeff=0.9937;MQ=60.94;MQ0=14;MQRankSum=-0.867;QD=50.35;ReadPosRankSum=-0.956;VQSLOD=4.4458;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:60.10:0,60,1113	1/1:2,13:16:42.14:1018,42,0	0/0:58,0:25:33.50:0,34,484	0/0:59,0:27:24.56:0,25,374	0/0:23,0:23:54.18:0,54,933	1/1:3,10:13:30.10:731,30,0	1/1:6,19:26:39.13:940,39,0	0/0:13,0:13:30.10:0,30,506	0/0:23,0:22:51.16:0,51,836	0/0:20,0:19:45.15:0,45,773	0/0:13,0:13:30.10:0,30,508	0/0:24,0:24:63.22:0,63,1061	0/0:6,0:6:15.05:0,15,259	0/0:11,0:11:30.10:0,30,514	0/0:30,0:30:72.25:0,72,1220	0/0:27,0:27:75.26:0,75,1288	0/0:28,0:28:57.18:0,57,958	0/0:29,0:27:55.23:0,55,946	0/0:15,0:15:30.08:0,30,451	0/0:26,0:26:75.23:0,75,1210	0/0:14,0:14:42.14:0,42,718	0/0:21,0:21:54.16:0,54,867	0/0:20,0:19:54.17:0,54,870	0/0:40,0:40:68.64:0,69,1372	1/1:6,19:27:57.20:1440,57,0	0/0:32,0:32:84.28:0,84,1421	0/0:25,0:25:54.11:0,54,867	0/0:10,0:10:24.08:0,24,415
chr10	105551938	.	GGGGA	G	531.78	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.837;DP=706;FS=6.131;HRun=0;HaplotypeScore=115.7480;InbreedingCoeff=0.9958;MQ=66.82;MQ0=4;MQRankSum=0.075;QD=44.32;ReadPosRankSum=3.258;VQSLOD=4.3554;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,99,2306	1/1:0,12:12:36.12:627,36,0	0/0:27,0:20:32.27:0,32,632	0/0:27,0:16:25.25:0,25,507	0/0:29,0:29:75.24:0,75,1787	0/0:17,0:17:48.16:0,48,1194	0/0:29,0:29:63.20:0,63,1463	0/0:15,0:15:36.04:0,36,684	0/0:27,0:27:81.07:0,81,1984	0/0:28,0:28:60.15:0,60,1456	0/0:19,0:19:45.15:0,45,1098	0/0:27,0:27:69.22:0,69,1680	0/0:19,0:19:54.19:0,54,1319	0/0:29,0:29:78.20:0,78,1730	0/0:32,0:32:78.26:0,78,1904	0/0:28,0:28:78.25:0,78,1854	0/0:29,0:29:87.25:0,87,2069	0/0:32,0:32:72.21:0,72,1699	0/0:25,0:24:60.19:0,60,1376	0/0:10,0:10:24.01:0,24,524	0/0:28,0:28:78.23:0,78,1844	0/0:17,0:16:45.15:0,45,1089	0/0:24,0:24:66.21:0,66,1623	0/0:33,0:33:84.19:0,84,2000	0/0:22,0:22:60.19:0,60,1448	0/0:33,0:33:96.30:0,96,2207	0/0:24,0:24:63.20:0,63,1516	0/0:22,0:22:66.23:0,66,1572
chr10	105553219	.	CA	C	4794.14	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=-2.195;DP=276;FS=36.403;HRun=2;HaplotypeScore=46.1701;InbreedingCoeff=0.5983;MQ=50.50;MQ0=17;MQRankSum=-4.453;QD=22.83;ReadPosRankSum=0.308;VQSLOD=2.6720;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:6:18.06:227,18,0	./.	0/0:24,0:7:12.47:0,12,89	0/0:40,0:6:5.54:0,6,25	1/1:2,7:9:9.03:116,9,0	1/1:0,13:11:21.07:271,21,0	1/1:3,8:11:15.31:168,15,0	1/1:2,7:10:18.06:233,18,0	1/1:1,5:5:9.03:116,9,0	1/1:3,14:17:48.54:584,49,0	1/1:1,5:5:15.05:193,15,0	1/1:1,7:6:15.05:186,15,0	1/1:1,12:13:21.07:267,21,0	1/1:1,8:9:14.96:172,15,0	1/1:0,8:7:18.06:232,18,0	1/1:2,6:7:9.03:111,9,0	1/1:1,6:4:9.03:116,9,0	1/1:1,4:3:9.03:116,9,0	1/1:1,6:7:21.07:261,21,0	1/1:0,4:4:9.03:111,9,0	1/1:6,2:3:9:99,9,0	1/1:1,6:7:15.04:179,15,0	1/1:0,5:4:9.03:116,9,0	1/1:1,1:2:3.01:39,3,0	1/1:0,2:2:6.02:77,6,0	1/1:0,10:8:21.07:271,21,0	1/1:1,15:16:27.09:341,27,0	1/1:2,11:11:15.05:194,15,0
chr10	105553224	.	TC	T	2665.74	PASS	AB=0.825;AC=44;AF=0.815;AN=54;BaseQRankSum=-6.626;DP=271;FS=171.541;HRun=3;HaplotypeScore=52.2175;InbreedingCoeff=-0.0278;MQ=50.22;MQ0=19;MQRankSum=-0.122;QD=9.91;ReadPosRankSum=1.077;VQSLOD=-0.5157;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,4:7:15.05:181,15,0	./.	0/1:23,0:7:6.64:7,0,96	0/1:40,0:6:0.25:0,0,2	1/1:1,8:9:9.03:108,9,0	1/1:8,6:12:0.90:126,1,0	1/1:4,5:9:17.41:178,17,0	1/1:3,6:8:15.05:183,15,0	0/1:4,2:5:1.92:32,0,2	0/1:10,9:18:17.60:311,0,18	1/1:0,5:5:15.04:175,15,0	1/1:6,2:7:0.82:57,1,0	1/1:7,6:12:1.36:95,1,0	1/1:4,5:9:11.95:128,12,0	1/1:3,5:6:15.05:182,15,0	0/1:5,3:7:1.07:27,0,1	1/1:7,1:4:9:95,9,0	1/1:4,1:3:6.02:72,6,0	0/1:6,2:8:4.69:89,0,5	1/1:2,2:4:7.26:77,7,0	1/1:4,1:2:3.01:34,3,0	1/1:2,4:6:12.04:142,12,0	1/1:1,4:4:9.03:111,9,0	0/0:1,0:1:2.04:0,2,6	1/1:0,2:2:6.02:74,6,0	0/1:8,2:8:10.41:54,0,10	1/1:9,6:15:8.25:185,8,0	0/1:10,3:10:17.05:61,0,17
chr10	105557045	.	TCACCAGCCC	T	4898.06	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.612;DP=729;FS=3.991;HRun=0;HaplotypeScore=198.1196;InbreedingCoeff=0.9996;MQ=84.28;MQ0=0;MQRankSum=-11.874;QD=68.03;ReadPosRankSum=1.219;VQSLOD=4.7636;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,6201	1/1:3,9:12:30.10:872,30,0	0/0:29,0:29:75.26:0,75,3472	0/0:25,0:25:69.13:0,69,2561	0/0:34,0:34:99:0,102,4401	1/1:0,24:24:63.22:1853,63,0	1/1:0,20:20:39.13:1173,39,0	0/0:33,0:33:81.28:0,81,3552	0/0:33,0:33:93.32:0,93,4031	0/0:39,0:39:99:0,111,5146	0/0:20,0:20:60.21:0,60,2624	0/0:24,0:24:72.25:0,72,3346	0/0:21,0:21:60.21:0,60,2891	0/0:20,0:20:54.19:0,54,2349	0/0:23,0:23:63.20:0,63,2726	0/0:24,0:24:69.24:0,69,3243	0/0:35,0:35:96.33:0,96,4443	0/0:17,0:17:45.15:0,45,2017	0/0:29,0:29:84.27:0,84,3539	0/0:27,0:27:75.23:0,75,3177	0/0:41,0:41:99:0,120,5691	0/0:27,0:27:72.25:0,72,3461	0/0:30,0:30:84.29:0,84,3561	0/0:14,0:14:42.13:0,42,1856	1/1:1,15:16:33.11:1000,33,0	0/0:39,0:39:99:0,111,4934	0/0:17,0:17:48.15:0,48,2193	0/0:10,0:10:30.10:0,30,1439
chr10	105557654	.	T	TTTTTC	109.25	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.851;DP=564;FS=4.875;HRun=0;HaplotypeScore=125.6476;InbreedingCoeff=0.7783;MQ=64.24;MQ0=1;MQRankSum=0.942;QD=12.14;ReadPosRankSum=-1.204;VQSLOD=2.7964;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:90.02:0,90,1437	1/1:1,8:9:9.01:192,9,0	0/0:6,0:5:3.77:0,4,59	0/0:9,0:8:11.76:0,12,101	0/0:15,0:15:30.26:0,30,422	0/0:27,0:27:78.16:0,78,1241	0/0:24,0:24:57.03:0,57,769	0/0:34,0:32:63.08:0,63,628	0/0:20,0:19:47.71:0,48,727	0/0:22,0:22:57.58:0,58,823	0/0:13,0:13:30.04:0,30,424	0/0:19,0:19:53.33:0,53,798	0/0:11,0:11:29.76:0,30,394	0/0:18,0:18:23.07:0,23,537	0/0:21,0:21:57.11:0,57,879	0/0:19,0:19:50.84:0,51,658	0/0:36,0:36:99:0,99,1617	0/0:22,0:21:57.06:0,57,753	0/0:21,0:21:54.16:0,54,383	0/0:15,0:15:35.04:0,35,298	0/0:14,0:14:31.54:0,32,249	0/0:10,0:10:30.06:0,30,421	0/0:16,0:15:38.59:0,39,482	0/0:36,0:36:60.95:0,61,1200	0/0:20,0:20:51.13:0,51,812	0/0:28,0:28:40.29:0,40,790	0/0:27,0:27:46.25:0,46,414	0/0:14,0:14:42.09:0,42,587
chr10	105557657	.	T	TC	2854.80	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-7.859;DP=557;FS=13.931;HRun=0;HaplotypeScore=67.4281;InbreedingCoeff=0.9746;MQ=63.39;MQ0=1;MQRankSum=-0.843;QD=25.95;ReadPosRankSum=-0.910;VQSLOD=2.6239;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:88.16:0,88,1126	0/0:8,0:8:8.41:0,8,43	0/0:6,0:5:11.67:0,12,104	0/0:8,0:7:16.96:0,17,158	0/0:14,0:14:35.96:0,36,362	0/0:28,0:28:76.15:0,76,978	0/0:23,0:23:65.92:0,66,746	1/1:11,21:30:46.96:860,47,0	0/0:20,0:19:54.06:0,54,657	0/0:22,0:22:66.02:0,66,777	0/0:13,0:13:36.03:0,36,440	0/0:18,0:18:54.12:0,54,697	0/0:12,0:12:35.62:0,36,383	0/0:18,0:18:53.87:0,54,584	0/0:21,0:21:53.41:0,53,724	0/0:19,0:19:47.05:0,47,591	0/0:36,0:36:94.87:0,95,1237	0/0:22,0:21:60.08:0,60,704	1/1:1,20:21:60.97:718,61,0	1/1:0,16:16:38.97:471,39,0	1/1:0,13:15:32.94:392,33,0	0/0:10,0:10:30.02:0,30,359	0/0:15,0:14:38.96:0,39,428	0/0:35,0:35:84.02:0,84,1019	0/0:20,0:20:57.15:0,57,743	0/0:29,0:29:78.19:0,78,917	1/1:2,24:26:40.18:589,40,0	0/0:14,0:14:41.92:0,42,506
chr10	105559311	.	G	GAAA	1669.63	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.063;DP=509;FS=0.000;HRun=14;HaplotypeScore=100.4448;InbreedingCoeff=0.8457;MQ=54.85;MQ0=8;MQRankSum=-7.448;QD=15.90;ReadPosRankSum=-7.138;VQSLOD=0.3110;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:36:37.99:0,38,390	1/1:1,1:4:9.03:146,9,0	0/0:9,0:7:3.93:0,4,35	0/0:8,0:7:8.20:0,8,62	0/0:16,0:19:9.70:0,10,207	0/0:11,0:13:7.13:0,7,97	0/0:27,0:30:51.77:0,52,488	1/1:16,10:28:48.20:420,48,0	0/0:13,0:14:12.12:0,12,137	0/0:16,0:16:11.74:0,12,135	0/0:18,0:21:19.98:0,20,174	0/0:13,0:16:10.94:0,11,134	0/0:9,0:9:8.57:0,9,82	0/0:12,0:12:14.61:0,15,153	0/0:13,0:13:6.77:0,7,143	0/0:20,0:21:24.40:0,24,245	0/0:35,0:40:28.64:0,29,345	0/0:21,0:21:38.66:0,39,380	1/1:15,6:21:29.86:308,30,0	1/1:19,0:19:38.89:472,39,0	1/1:8,7:15:12.04:184,12,0	0/0:9,0:9:8.08:0,8,71	0/0:18,0:19:26.21:0,26,258	0/0:26,0:28:35.11:0,35,382	0/0:14,0:15:26.48:0,26,246	0/0:17,0:19:18.96:0,19,186	1/1:9,5:15:21.07:320,21,0	0/0:11,0:9:20.98:0,21,216
chr10	105559803	.	G	GA	4699.88	PASS	AB=0.563;AC=17;AF=0.304;AN=56;BaseQRankSum=-8.611;DP=597;FS=1.615;HRun=9;HaplotypeScore=65.6669;InbreedingCoeff=0.9219;MQ=59.34;MQ0=14;MQRankSum=-0.205;QD=22.81;ReadPosRankSum=-0.752;VQSLOD=5.4192;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,1:42:83.79:0,84,956	0/1:2,7:8:4.53:178,0,5	0/0:13,0:9:11.65:0,12,130	0/0:8,0:7:17.48:0,17,136	0/0:31,0:31:83.98:0,84,729	1/1:2,12:14:30.08:332,30,0	1/1:4,17:21:44.56:460,45,0	1/1:6,20:26:34.17:603,34,0	0/0:6,0:6:8.99:0,9,78	0/0:23,0:22:50.98:0,51,442	0/0:19,0:19:41.97:0,42,365	0/0:16,0:15:38.99:0,39,339	0/0:13,0:13:32.98:0,33,283	0/0:19,0:16:44.99:0,45,391	0/0:23,0:22:56.99:0,57,494	0/0:16,0:14:32.97:0,33,281	0/0:26,1:25:56.98:0,57,495	0/0:24,0:23:38.84:0,39,339	1/1:6,24:29:75.19:818,75,0	1/1:6,21:26:63:674,63,0	1/1:5,19:25:53.98:578,54,0	0/0:20,0:19:50.87:0,51,442	0/0:15,0:15:26.97:0,27,230	0/0:29,0:29:68.96:0,69,594	1/1:8,14:21:45.10:485,45,0	0/0:22,0:22:59.98:0,60,520	1/1:8,23:31:31.38:572,31,0	0/0:24,0:21:50.96:0,51,443
chr10	105560363	.	T	TA	1587.06	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=-3.797;DP=438;FS=11.914;HRun=9;HaplotypeScore=60.4878;InbreedingCoeff=0.7925;MQ=56.54;MQ0=11;MQRankSum=0.395;QD=16.03;ReadPosRankSum=-4.188;VQSLOD=1.5977;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:62.82:0,63,524	1/1:3,0:3:9.02:99,9,0	0/0:43,0:11:11.79:0,12,82	0/0:33,0:14:20.24:0,20,126	0/0:16,0:16:35.33:0,35,289	0/0:16,0:16:6.84:0,7,204	0/0:8,0:8:11.99:0,12,104	1/1:11,19:30:57.09:598,57,0	0/0:10,0:10:26.94:0,27,223	0/0:19,0:19:50.01:0,50,414	0/0:12,0:12:23.81:0,24,187	0/0:11,0:11:29.95:0,30,250	0/0:7,0:7:17.87:0,18,145	0/0:6,0:6:14.98:0,15,125	0/0:14,0:14:20.96:0,21,179	0/0:6,0:6:17.99:0,18,154	0/0:31,0:31:71.98:0,72,586	0/0:22,0:22:45.40:0,45,388	1/1:23,2:24:53.44:515,53,0	1/1:2,9:11:21.02:214,21,0	1/1:3,0:3:6.01:64,6,0	0/0:4,0:4:6:0,6,52	0/1:6,0:6:11.73:12,0,61	0/1:4,0:2:0:0,0,0	0/0:20,0:19:15.34:0,15,301	0/0:19,0:18:38.97:0,39,334	1/1:3,13:17:26.89:264,27,0	0/0:14,0:13:33.67:0,34,260
chr10	105560478	.	GAC	G	6471.12	PASS	AB=0.920;AC=19;AF=0.339;AN=56;BaseQRankSum=12.033;DP=538;FS=2.557;HRun=0;HaplotypeScore=65.6061;InbreedingCoeff=0.9197;MQ=87.82;MQ0=1;MQRankSum=-1.242;QD=33.36;ReadPosRankSum=0.700;VQSLOD=6.4108;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.28:0,87,1561	1/1:0,8:8:24.08:344,24,0	0/0:15,0:15:42.13:0,42,724	0/0:27,1:28:72.22:0,72,1240	0/0:12,0:12:33.11:0,33,603	1/1:0,23:22:57.19:817,57,0	1/1:1,20:21:45.11:645,45,0	1/1:1,28:29:84.26:1166,84,0	0/0:19,0:19:54.19:0,54,989	0/0:13,0:13:36.12:0,36,657	0/0:15,0:15:39.13:0,39,694	0/0:17,0:17:51.17:0,51,935	0/0:19,0:19:51.14:0,51,900	0/0:14,0:14:42.14:0,42,769	0/0:26,0:26:75.26:0,75,1365	0/0:20,0:20:60.21:0,60,1100	0/0:38,0:38:99:0,108,1901	0/0:19,0:19:51.17:0,51,923	1/1:1,24:25:72.23:1013,72,0	1/1:1,16:16:42.10:579,42,0	1/1:0,27:27:81.27:1160,81,0	0/0:10,0:10:27.09:0,27,475	0/0:7,0:7:18.06:0,18,320	0/1:21,2:23:16.75:17,0,1086	1/1:0,8:8:24.08:344,24,0	0/0:26,0:26:75.24:0,75,1337	1/1:1,12:13:27.09:387,27,0	0/0:15,0:15:45.15:0,45,824
chr10	105561598	.	CGACA	C	4641.45	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.533;DP=649;FS=0.000;HRun=0;HaplotypeScore=133.0725;InbreedingCoeff=0.9756;MQ=77.76;MQ0=1;MQRankSum=-7.597;QD=38.68;ReadPosRankSum=-0.418;VQSLOD=4.9542;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,2996	1/1:0,6:6:8.97:167,9,0	0/0:20,0:21:60.15:0,60,1369	0/0:36,0:34:69.59:0,70,1856	0/0:21,0:21:63.22:0,63,1665	0/0:29,0:29:84.29:0,84,1591	0/0:20,0:20:60.21:0,60,1132	1/1:4,23:27:66.21:1182,66,0	0/0:38,0:38:99:0,105,2741	0/0:21,0:21:60.21:0,60,1565	0/0:11,0:11:33.11:0,33,867	0/0:30,0:30:84.29:0,84,2151	0/0:25,0:25:75.26:0,75,1947	0/0:22,0:22:63.22:0,63,1672	0/0:24,0:24:72.25:0,72,1883	0/0:25,0:25:75.26:0,75,1932	0/0:35,0:35:96.33:0,96,2536	0/0:18,0:18:54.19:0,54,1403	1/1:4,11:15:33.11:615,33,0	1/1:1,5:6:9.03:168,9,0	1/1:7,38:45:90.31:1671,90,0	0/0:15,0:15:42.14:0,42,1109	0/0:11,0:11:27.09:0,27,719	0/0:32,0:32:93.32:0,93,2453	0/0:17,0:17:48.16:0,48,881	0/0:20,0:20:57.20:0,57,1495	1/1:2,19:21:45.15:838,45,0	0/0:16,0:16:48.16:0,48,1250
chr10	105562206	.	G	GT	4628.09	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-10.590;DP=722;FS=0.359;HRun=6;HaplotypeScore=70.3717;InbreedingCoeff=0.9997;MQ=88.78;MQ0=0;MQRankSum=-4.048;QD=30.45;ReadPosRankSum=-1.974;VQSLOD=4.6440;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:96.21:0,96,979	1/1:2,10:12:27.09:339,27,0	0/0:29,0:30:63.06:0,63,614	0/0:24,0:24:54.02:0,54,515	0/0:22,0:22:57.12:0,57,581	0/0:19,0:19:54.09:0,54,536	0/0:28,0:28:78.17:0,78,795	1/1:6,28:34:87.21:1062,87,0	0/0:30,0:30:87.18:0,87,881	0/0:31,0:31:84.16:0,84,839	0/0:20,0:20:60.14:0,60,611	0/0:18,0:18:54.12:0,54,551	0/0:20,0:20:51.11:0,51,520	0/0:20,0:20:54.10:0,54,544	0/0:21,0:21:63.13:0,63,637	0/0:24,0:24:66.15:0,66,672	0/0:33,0:33:93.18:0,93,939	0/0:30,0:30:84.19:0,84,857	1/1:3,16:19:51.11:601,51,0	1/1:0,14:14:39.12:490,39,0	1/1:6,40:46:99:1305,105,0	0/0:28,0:28:81.18:0,81,826	0/0:28,0:28:78.17:0,78,795	0/0:43,0:43:99:0,117,1182	0/0:22,0:22:63.13:0,63,636	0/0:30,0:30:81.16:0,81,815	1/1:2,25:26:66.21:830,66,0	0/0:12,0:12:30.07:0,30,306
chr10	105563510	.	T	TAC	728.18	PASS	AB=0.863;AC=13;AF=0.241;AN=54;BaseQRankSum=2.206;DP=638;FS=0.000;HRun=0;HaplotypeScore=97.1682;InbreedingCoeff=0.3768;MQ=71.57;MQ0=8;MQRankSum=-1.561;QD=3.37;ReadPosRankSum=-2.224;VQSLOD=1.9280;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:19.47:0,19,154	0/0:2,0:7:8.52:0,9,42	1/1:30,0:17:0.47:1,0,0	./.	0/0:19,0:23:26.97:0,27,267	0/0:20,0:20:3.91:0,4,82	0/1:22,0:22:2.62:3,0,111	1/1:25,0:25:14.45:82,14,0	0/0:16,0:16:26.71:0,27,260	0/1:29,0:28:20.65:21,0,137	0/0:22,0:22:27.05:0,27,284	0/0:26,0:30:47.60:0,48,456	0/1:12,1:14:27.14:27,0,106	0/0:19,0:20:17.87:0,18,177	0/0:17,0:21:47.61:0,48,458	0/0:24,0:27:41.56:0,42,411	0/0:24,0:24:33.01:0,33,328	0/0:19,0:24:25.85:0,26,340	0/0:10,0:10:2.28:0,2,25	1/1:13,6:21:15.05:224,15,0	0/1:17,11:30:30.70:101,0,31	0/0:23,0:26:20.52:0,21,191	0/0:15,0:16:29.33:0,29,247	0/0:42,0:42:50.88:0,51,500	0/1:14,12:26:4.74:285,0,5	0/0:18,0:18:2.79:0,3,13	1/1:8,2:18:17.69:138,18,0	0/0:12,0:12:3.01:0,3,33
chr10	105566763	.	G	GA	1441.30	PASS	AB=0.958;AC=17;AF=0.304;AN=56;BaseQRankSum=3.886;DP=464;FS=3.637;HRun=10;HaplotypeScore=95.4250;InbreedingCoeff=0.4927;MQ=48.00;MQ0=30;MQRankSum=-7.120;QD=7.63;ReadPosRankSum=-5.314;VQSLOD=1.2831;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:35.76:0,36,279	1/1:4,3:6:9.02:93,9,0	0/1:24,0:3:5.86:6,0,19	0/0:16,0:2:0.49:0,0,8	0/0:19,0:19:32.90:0,33,267	0/0:15,0:14:23.82:0,24,197	0/0:13,0:13:8.32:0,8,73	1/1:13,13:26:53.93:522,54,0	0/0:11,0:11:11.50:0,11,118	0/0:12,0:12:14.92:0,15,123	0/0:22,0:21:23.90:0,24,197	0/1:12,1:13:11.80:65,0,12	0/0:11,0:11:2.91:0,3,25	0/0:16,0:15:13.30:0,13,120	0/0:13,0:11:11.85:0,12,98	0/1:10,0:10:1.55:2,0,41	0/0:23,0:21:11.49:0,11,98	0/0:22,0:22:23.71:0,24,189	1/1:10,6:16:2.38:209,2,0	1/1:9,9:17:26.95:251,27,0	1/1:6,2:8:9.01:89,9,0	0/0:16,0:15:23.89:0,24,191	0/0:13,0:13:8.93:0,9,74	0/1:23,2:23:2.31:2,0,192	0/1:13,1:13:8.07:8,0,140	0/0:26,0:26:38.71:0,39,316	1/1:18,10:28:38.90:367,39,0	0/0:4,0:4:2.89:0,3,25
chr10	105566778	.	CAA	C	721.90	PASS	AB=0.802;AC=10;AF=0.179;AN=56;BaseQRankSum=2.404;DP=501;FS=0.000;HRun=17;HaplotypeScore=68.6371;InbreedingCoeff=0.6735;MQ=49.55;MQ0=29;MQRankSum=-4.609;QD=6.50;ReadPosRankSum=1.327;VQSLOD=-0.5005;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:28:26.09:0,26,461	0/0:3,0:4:8.31:0,8,48	0/0:33,1:7:10.68:0,11,65	0/0:22,0:3:5.23:0,5,40	0/0:17,0:17:27.03:0,27,322	0/0:14,0:14:29.37:0,29,293	0/0:13,0:15:20.24:0,20,228	1/1:15,12:30:30.35:259,30,0	0/0:15,0:15:23.98:0,24,255	0/0:15,0:16:39.06:0,39,431	0/0:20,1:21:11.60:0,12,282	0/0:11,0:11:14.99:0,15,160	0/0:7,0:7:16.86:0,17,183	0/0:17,0:16:24.03:0,24,264	0/0:8,0:13:8.22:0,8,61	0/0:8,0:10:19.26:0,19,191	0/0:24,0:27:38.02:0,38,393	0/0:20,0:23:49.86:0,50,514	0/1:11,6:19:16.78:128,0,17	1/1:6,11:17:32.50:253,32,0	1/1:2,4:6:2.70:23,3,0	0/0:14,0:14:21.01:0,21,235	0/0:12,0:15:29.85:0,30,306	0/0:26,0:26:35.09:0,35,321	0/1:14,1:17:0.24:0,0,168	0/0:25,0:27:61.18:0,61,633	1/1:12,9:21:26.64:213,27,0	0/0:3,0:3:9.03:0,9,114
chr10	105566819	.	ATCTT	A	1018.52	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.544;DP=388;FS=4.104;HRun=0;HaplotypeScore=71.8890;InbreedingCoeff=0.9637;MQ=89.94;MQ0=1;MQRankSum=-5.121;QD=31.83;ReadPosRankSum=0.162;VQSLOD=3.3451;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.20:0,63,1596	0/0:6,0:6:15.05:0,15,400	0/0:22,0:22:61.05:0,61,1466	0/0:14,0:13:36.12:0,36,960	0/0:14,0:13:36.12:0,36,933	1/1:0,8:8:17.98:264,18,0	1/1:1,14:14:30.10:559,30,0	0/0:32,0:32:96.29:0,96,2477	0/0:9,0:9:24.08:0,24,637	0/0:13,0:13:39.13:0,39,1016	0/0:9,0:9:27.09:0,27,664	0/0:11,0:11:30.10:0,30,800	0/0:9,0:9:27.09:0,27,680	0/0:7,0:7:21.07:0,21,531	0/0:16,0:16:33.01:0,33,871	0/0:9,0:9:27.09:0,27,720	0/0:14,0:14:39.11:0,39,939	0/0:18,0:18:42.14:0,42,1083	0/0:15,0:15:45.12:0,45,1017	0/0:19,0:19:51.18:0,51,1359	0/0:17,0:17:51.17:0,51,1316	0/0:9,0:9:27.09:0,27,720	0/0:10,0:10:27.09:0,27,720	0/0:20,0:20:54.18:0,54,1400	1/1:0,9:9:18.06:336,18,0	0/0:24,0:24:72.25:0,72,1900	0/0:13,0:13:30.06:0,30,799	0/0:3,0:3:9.03:0,9,240
chr10	105566971	.	G	GT	5971.59	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-8.154;DP=523;FS=1.150;HRun=3;HaplotypeScore=52.1050;InbreedingCoeff=0.9988;MQ=74.29;MQ0=0;MQRankSum=-1.327;QD=37.09;ReadPosRankSum=-2.521;VQSLOD=4.2085;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1301	1/1:1,8:9:24.08:336,24,0	0/0:11,0:10:22.77:0,23,263	0/0:16,0:16:45.01:0,45,481	0/0:18,0:18:54.13:0,54,616	1/1:2,17:19:57.14:760,57,0	1/1:2,19:21:54.18:756,54,0	1/1:4,25:29:75.24:1034,75,0	0/0:19,0:19:51.16:0,51,612	0/0:23,0:23:66.19:0,66,781	0/0:18,0:18:51.12:0,51,581	0/0:17,0:17:48.15:0,48,576	0/0:13,0:13:39.12:0,39,468	0/0:9,0:9:24.07:0,24,288	0/0:17,0:17:51.15:0,51,603	0/0:17,0:17:48.15:0,48,576	0/0:20,0:20:57.17:0,57,683	0/0:37,0:37:99:0,105,1246	1/1:7,12:19:48.10:618,48,0	1/1:0,13:13:39.08:523,39,0	1/1:0,18:18:48.16:672,48,0	0/0:11,0:11:33.03:0,33,366	0/0:15,0:15:42.12:0,42,493	0/0:26,0:26:75.23:0,75,900	1/1:2,14:16:45.06:583,45,0	0/0:26,0:26:78.20:0,78,919	1/1:1,16:17:51.15:691,51,0	0/0:11,0:11:33.10:0,33,396
chr10	105567054	.	GA	G	5614	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.742;DP=655;FS=8.430;HRun=7;HaplotypeScore=67.3297;InbreedingCoeff=0.9981;MQ=58.49;MQ0=9;MQRankSum=-0.863;QD=25.63;ReadPosRankSum=-2.085;VQSLOD=4.4586;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,1745	1/1:1,9:10:27.06:275,27,0	0/0:35,0:19:24:0,24,325	0/0:22,0:6:18.05:0,18,217	0/0:23,0:23:63.16:0,63,762	1/1:8,16:24:63.14:641,63,0	1/1:1,13:14:33.07:337,33,0	1/1:7,38:43:99:1133,112,0	0/0:15,0:15:42.13:0,42,528	0/0:29,0:29:81.26:0,81,1019	0/0:19,0:19:51.16:0,51,641	0/0:24,0:24:72.22:0,72,891	0/0:18,0:18:45.10:0,45,549	0/0:17,0:17:48.14:0,48,590	0/0:20,0:20:54.17:0,54,679	0/0:14,0:14:33.10:0,33,411	0/0:23,0:23:66.20:0,66,817	0/0:28,0:28:81.20:0,81,987	1/1:6,21:26:63.14:640,63,0	1/1:4,13:16:42.09:428,42,0	1/1:5,17:22:60.13:611,60,0	0/0:22,0:22:66.20:0,66,814	0/0:16,0:16:39.11:0,39,472	0/0:22,0:22:60.19:0,60,755	1/1:1,28:28:66.15:672,66,0	0/0:25,0:25:69.22:0,69,868	1/1:2,29:31:87.17:878,87,0	0/0:15,0:15:45.14:0,45,558
chr10	105569092	.	TCACACACACACACA	T	2059.07	PASS	AB=0.833;AC=10;AF=0.179;AN=56;BaseQRankSum=5.205;DP=649;FS=6.612;HRun=0;HaplotypeScore=217.1863;InbreedingCoeff=0.6458;MQ=60.29;MQ0=34;MQRankSum=-6.302;QD=18.38;ReadPosRankSum=0.395;VQSLOD=2.0217;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:39.10:0,39,1730	0/1:6,3:12:8.89:487,0,9	0/0:55,0:12:3.01:0,3,60	0/0:62,0:21:9.03:0,9,169	0/0:17,0:20:12.04:0,12,675	0/0:15,0:20:20.98:0,21,268	0/0:24,0:36:42.53:0,43,676	0/1:18,0:18:10.27:88,0,10	0/0:16,0:18:24.08:0,24,1258	0/0:17,0:17:33.11:0,33,1350	0/0:11,0:10:21.53:0,22,1054	0/0:21,0:19:36.12:0,36,1906	0/0:13,0:14:33.11:0,33,1924	0/0:21,0:24:39.11:0,39,1946	0/0:19,0:22:39.13:0,39,2250	0/0:18,0:22:36.12:0,36,2034	0/0:32,0:38:75.21:0,75,4077	0/0:14,0:14:15.72:0,16,1502	1/1:10,1:11:5.93:145,6,0	1/1:7,5:13:9.03:333,9,0	1/1:28,12:40:5.93:40,6,0	0/0:9,0:10:24.08:0,24,1308	0/0:13,0:13:24.07:0,24,1328	0/0:37,0:40:90.31:0,90,4923	0/0:12,0:20:38.98:0,39,568	0/0:20,0:20:34.67:0,35,1750	1/1:6,10:17:30.10:1118,30,0	0/0:6,0:7:9.03:0,9,584
chr10	105569329	.	C	CAAA	2809.61	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=1.179;DP=546;FS=0.987;HRun=11;HaplotypeScore=79.5181;InbreedingCoeff=0.9239;MQ=57.05;MQ0=2;MQRankSum=-3.923;QD=23.03;ReadPosRankSum=-4.916;VQSLOD=1.3956;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:40:79.19:0,79,1037	1/1:1,0:5:11.46:74,11,0	0/0:3,0:2:2.96:0,3,33	0/1:1,0:1:0:0,0,0	0/0:26,0:26:65.76:0,66,741	0/0:19,0:19:42.05:0,42,470	0/0:22,0:22:41.98:0,42,491	1/1:13,20:36:72.80:997,73,0	0/0:16,0:16:29.98:0,30,322	0/0:26,0:27:56.95:0,57,637	0/0:10,0:11:23.95:0,24,252	0/0:17,0:17:35.91:0,36,358	0/0:9,0:9:27.07:0,27,305	0/0:23,0:23:53.18:0,53,540	0/0:22,0:24:40.05:0,40,624	0/0:23,0:22:45:0,45,525	0/0:37,0:39:81.05:0,81,890	0/0:18,0:18:32.91:0,33,370	1/1:1,0:21:57.29:451,57,0	1/1:6,11:18:41.99:654,42,0	1/1:3,11:16:24.06:404,24,0	0/0:16,0:16:20.91:0,21,219	0/0:13,0:13:30.05:0,30,340	0/0:19,0:21:47.93:0,48,514	0/0:18,0:18:35.99:0,36,408	0/0:27,0:28:69.04:0,69,762	1/1:9,12:22:23.70:413,24,0	0/0:9,0:7:21.04:0,21,227
chr10	105571457	.	ATG	A	186.22	PASS	AB=0.919;AC=9;AF=0.161;AN=56;BaseQRankSum=4.701;DP=573;FS=4.374;HRun=0;HaplotypeScore=84.7607;InbreedingCoeff=-0.0852;MQ=65.42;MQ0=6;MQRankSum=0.644;QD=1.19;ReadPosRankSum=1.018;VQSLOD=1.4114;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:44:50.05:0,50,916	0/0:4,0:4:2.99:0,3,24	0/0:21,0:10:2.97:0,3,20	0/0:27,0:15:1.25:0,1,3	0/1:15,2:17:16.05:16,0,163	0/0:20,0:20:2.52:0,3,80	0/0:25,0:25:8.76:0,9,115	0/0:26,0:24:23.94:0,24,200	0/1:16,1:16:22.47:22,0,309	0/1:21,3:25:73.83:74,0,400	1/1:8,0:8:2.98:21,3,0	0/0:25,2:27:29.07:0,29,773	0/0:19,0:19:44.95:0,45,606	0/1:10,2:12:16.06:16,0,141	0/0:9,0:9:21.01:0,21,236	0/0:19,3:22:2.04:0,2,430	0/0:39,1:41:11.26:0,11,941	0/0:26,3:29:29.04:0,29,787	0/0:10,0:10:6.41:0,6,42	0/0:10,0:10:5.98:0,6,46	0/0:21,0:20:14.96:0,15,121	0/0:18,0:18:21.51:0,22,310	0/1:12,0:12:26.36:26,0,101	0/1:36,3:40:86.51:87,0,678	0/0:10,0:10:5.79:0,6,38	0/1:25,1:24:54.73:55,0,312	0/0:15,0:15:20.97:0,21,185	0/0:16,2:18:2.02:0,2,422
chr10	105571500	.	C	CGCGAGTGAGCGTGTGCGT	6354.96	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=3.257;DP=530;FS=11.893;HRun=0;HaplotypeScore=229.4460;InbreedingCoeff=0.8052;MQ=61.65;MQ0=3;MQRankSum=-8.725;QD=35.31;ReadPosRankSum=-5.774;VQSLOD=1.4713;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,108,4583	0/1:3,0:3:0:0,0,0	0/0:7,0:4:2.92:0,3,17	0/1:11,0:7:1.14:1,0,33	0/0:7,0:7:21.05:0,21,904	1/1:7,0:29:18.34:659,18,0	1/1:16,0:51:5.86:324,6,0	1/1:26,0:25:72.04:1936,72,0	0/0:20,0:20:57.18:0,57,2533	0/0:23,0:23:63.19:0,63,2825	0/0:6,0:6:6.02:0,6,116	0/0:23,0:22:56.91:0,57,2631	0/0:16,0:16:45.12:0,45,2081	0/0:16,0:16:45.12:0,45,1831	0/0:12,0:12:36.10:0,36,1367	0/0:20,0:20:54.14:0,54,2465	0/0:39,0:39:77.27:0,77,3807	0/0:27,0:27:78.22:0,78,3516	1/1:21,0:21:59.79:1964,60,0	1/1:3,0:4:5.97:45,6,0	1/1:14,0:12:9:100,9,0	0/0:11,0:11:21.61:0,22,865	0/0:9,0:9:20.98:0,21,826	0/0:37,0:37:99:0,105,4348	1/1:3,1:7:3.01:264,3,0	0/0:14,0:13:36.10:0,36,1393	1/1:13,0:13:24.38:1061,24,0	0/0:13,0:12:33.08:0,33,1417
chr10	105572393	.	GTCAGTGAGTCGACGGA	G	5760.75	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.450;DP=716;FS=0.591;HRun=0;HaplotypeScore=305.1674;InbreedingCoeff=0.9981;MQ=79.59;MQ0=0;MQRankSum=-10.664;QD=96.01;ReadPosRankSum=0.368;VQSLOD=3.8861;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,160,11924	0/0:12,0:12:33.11:0,33,2311	0/0:17,0:17:51.13:0,51,3020	0/0:22,0:21:49.08:0,49,2922	0/0:21,0:21:63.22:0,63,4960	1/1:2,17:19:45.15:2096,45,0	1/1:8,18:27:45.15:2121,45,0	0/0:16,0:16:45.15:0,45,2822	0/0:33,0:33:99:0,99,7148	0/0:23,0:23:66.23:0,66,5003	0/0:8,0:8:21.07:0,21,1557	0/0:31,0:31:90.27:0,90,6199	0/0:24,0:24:72.20:0,72,5059	0/0:26,0:26:75.26:0,75,5708	0/0:23,0:23:69.24:0,69,5314	0/0:26,0:26:78.27:0,78,5888	0/0:42,0:42:99:0,120,9231	0/0:41,0:41:99:0,123,9343	0/0:25,0:25:66.23:0,66,4337	0/0:12,0:12:36.12:0,36,2485	0/0:63,0:63:99:0,184,13431	0/0:25,0:25:72.25:0,72,5486	0/0:11,0:11:30.10:0,30,2152	0/0:37,0:37:99:0,111,8552	1/1:2,12:14:33.11:1544,33,0	0/0:26,0:26:75.26:0,75,5466	0/0:16,0:16:48.16:0,48,3290	0/0:21,0:21:60.21:0,60,4238
chr10	105572864	.	T	TGA	4991.47	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=0.049;DP=546;FS=3.702;HRun=0;HaplotypeScore=189.1323;InbreedingCoeff=0.9862;MQ=66.76;MQ0=1;MQRankSum=-7.409;QD=46.65;ReadPosRankSum=-4.152;VQSLOD=3.3333;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.23:0,72,1012	1/1:2,8:10:27.08:448,27,0	0/0:13,0:13:32.74:0,33,433	0/0:8,0:8:23.97:0,24,313	0/0:19,0:19:45.15:0,45,645	0/0:16,0:16:42.14:0,42,601	0/0:33,0:33:93.27:0,93,1308	1/1:3,23:26:72.25:1300,72,0	0/0:24,0:24:63.18:0,63,865	0/0:25,0:25:72.24:0,72,1032	0/0:12,0:12:33.11:0,33,471	0/0:22,0:22:66.21:0,66,926	0/0:17,0:17:48.12:0,48,664	0/0:21,0:21:60.20:0,60,855	0/0:26,0:26:75.25:0,75,1073	0/0:25,0:25:75.21:0,75,1046	0/0:30,0:30:81.27:0,81,1159	0/0:28,0:28:72.20:0,72,1004	1/1:4,11:15:45.07:725,45,0	1/1:1,4:5:9.03:163,9,0	1/1:5,27:31:78.25:1382,78,0	0/0:9,0:9:21.07:0,21,301	0/0:11,0:11:27.09:0,27,384	0/0:21,0:21:51.17:0,51,730	0/0:13,0:13:30.10:0,30,430	0/0:24,0:24:66.22:0,66,945	1/1:4,15:19:57.16:973,57,0	0/0:14,0:14:39.13:0,39,559
chr10	105572870	.	TC	T	2602.51	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=3.721;DP=535;FS=0.921;HRun=3;HaplotypeScore=193.7028;InbreedingCoeff=0.9914;MQ=66.88;MQ0=1;MQRankSum=-7.444;QD=26.83;ReadPosRankSum=-2.873;VQSLOD=1.8698;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.03:0,75,996	1/1:2,8:10:24.06:278,24,0	0/0:12,0:12:20.96:0,21,357	0/0:11,0:10:24.08:0,24,332	0/0:19,0:19:53.98:0,54,685	0/0:15,0:15:42.07:0,42,578	0/0:33,0:33:90.15:0,90,1222	1/1:2,23:25:63.20:776,63,0	0/0:22,0:22:63.01:0,63,847	0/0:25,0:25:75.25:0,75,1077	0/0:12,0:12:36.01:0,36,455	0/0:20,0:20:57.19:0,57,813	0/0:20,0:20:54.07:0,54,727	0/0:21,0:21:60.13:0,60,836	0/0:25,0:25:75.21:0,75,1055	0/0:26,0:26:72.20:0,72,1011	0/0:33,0:33:93.20:0,93,1270	0/0:28,0:28:72.19:0,72,994	1/1:1,11:12:33.10:406,33,0	1/1:0,4:4:11.98:129,12,0	1/1:5,25:29:62.84:641,63,0	0/0:9,0:9:26.92:0,27,334	0/0:11,0:11:29.93:0,30,379	0/0:22,0:22:53.74:0,54,673	0/0:12,0:12:32.97:0,33,420	0/0:22,0:22:66.22:0,66,945	1/1:0,16:16:48.11:559,48,0	0/0:13,0:13:30.10:0,30,432
chr10	105572913	.	A	AG	16994.77	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.510;DP=485;FS=2.301;HRun=3;HaplotypeScore=205.6189;InbreedingCoeff=0.7695;MQ=43.90;MQ0=0;MQRankSum=-2.988;QD=35.78;ReadPosRankSum=1.732;VQSLOD=3.7473;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,21:31:60.20:871,60,0	1/1:3,6:9:21.01:265,21,0	0/0:3,0:3:2.99:0,3,24	0/0:7,0:4:5.75:0,6,44	1/1:2,11:13:15.52:225,16,0	1/1:3,13:16:42.07:584,42,0	1/1:6,26:32:84.21:1201,84,0	1/1:4,22:26:69.19:995,69,0	1/1:1,22:23:66.22:978,66,0	1/1:5,16:21:57.11:795,57,0	1/1:1,3:4:9.03:134,9,0	1/1:2,24:26:75.24:1063,75,0	1/1:4,20:24:69.18:974,69,0	1/1:4,16:20:51.17:721,51,0	1/1:2,14:16:45.10:640,45,0	1/1:2,20:22:63.21:933,63,0	1/1:3,21:24:72.04:956,72,0	1/1:5,19:24:60.20:886,60,0	1/1:4,18:21:57.15:812,57,0	1/1:0,5:5:11.97:152,12,0	1/1:3,19:22:36.01:426,36,0	1/1:3,6:9:18.90:246,19,0	1/1:1,4:5:14.98:197,15,0	1/1:4,17:21:36.32:484,36,0	1/1:2,9:11:27.02:376,27,0	1/1:2,15:17:51.15:719,51,0	1/1:3,20:23:68.97:970,69,0	1/1:2,7:9:27.09:391,27,0
chr10	105575287	.	C	CAGGTTCTGCTCCACCCAACGGTACT	37851.79	PASS	AB=0.625;AC=53;AF=0.981;AN=54;BaseQRankSum=0.709;DP=215;FS=15.441;HRun=0;HaplotypeScore=242.1527;InbreedingCoeff=-0.0489;MQ=55.18;MQ0=0;MQRankSum=-1.653;QD=176.05;ReadPosRankSum=1.260;VQSLOD=3.0991;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:18.06:1278,18,0	1/1:2,0:2:6.02:441,6,0	1/1:0,1:2:6.02:345,6,0	0/1:2,0:5:15.44:181,0,15	1/1:7,0:7:10.28:424,10,0	1/1:9,0:9:21.07:1805,21,0	1/1:7,0:7:15:1010,15,0	1/1:11,0:11:30.09:1963,30,0	1/1:10,0:9:24.07:1931,24,0	1/1:10,0:10:21.07:1520,21,0	1/1:2,0:2:6.02:323,6,0	1/1:18,0:18:45.15:3112,45,0	1/1:10,0:10:23.75:1649,24,0	1/1:9,0:9:27.09:1998,27,0	1/1:16,0:16:42.62:3785,43,0	1/1:8,0:8:18.06:1489,18,0	1/1:7,0:6:15.05:1026,15,0	1/1:4,0:4:12.04:1106,12,0	1/1:3,0:3:9.03:674,9,0	1/1:5,0:5:15.05:1034,15,0	1/1:14,0:13:30.10:1633,30,0	1/1:11,0:11:27.09:1922,27,0	1/1:2,0:2:3.01:219,3,0	1/1:4,0:4:6.02:289,6,0	1/1:12,0:12:30.10:2266,30,0	1/1:9,0:9:27.09:2270,27,0	1/1:8,0:8:24.08:2157,24,0	./.
chr10	105576500	.	TGCGCGTGC	T	197.36	PASS	AB=1.000;AC=14;AF=0.292;AN=48;BaseQRankSum=1.925;DP=392;FS=7.533;HRun=0;HaplotypeScore=140.2295;InbreedingCoeff=-0.1873;MQ=35.80;MQ0=6;MQRankSum=-4.247;QD=1.02;ReadPosRankSum=-1.273;VQSLOD=2.1518;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:23.91:0,24,706	0/1:5,0:5:25.26:25,0,61	./.	0/0:10,0:5:7.56:0,8,97	./.	0/1:18,0:18:18.46:18,0,166	0/1:29,0:29:45.11:45,0,86	0/1:26,0:23:76.96:77,0,772	0/0:15,0:15:13.79:0,14,374	0/1:18,0:18:22.09:22,0,579	0/0:7,0:7:3.01:0,3,129	0/1:26,0:26:49.83:50,0,455	0/0:8,0:8:21.07:0,21,527	0/1:12,0:12:5.68:6,0,327	1/1:11,0:11:0.09:29,0,0	0/0:9,0:9:13.27:0,13,210	0/0:24,0:24:23.53:0,24,497	0/0:10,0:8:20.11:0,20,666	0/1:11,0:4:9.56:10,0,76	1/1:4,0:4:2.40:10,2,0	0/0:13,0:13:2.93:0,3,14	./.	0/0:10,0:10:2.53:0,3,74	0/1:25,0:25:11.78:12,0,399	0/0:9,0:9:11.03:0,11,120	0/0:27,0:26:62.34:0,62,1662	0/1:9,0:9:28.67:29,0,342	./.
chr10	105576506	.	T	TTCAA	791.19	PASS	AB=0.863;AC=19;AF=0.365;AN=52;BaseQRankSum=8.980;DP=434;FS=38.322;HRun=0;HaplotypeScore=146.7980;InbreedingCoeff=-0.2588;MQ=36.65;MQ0=7;MQRankSum=-5.374;QD=2.56;ReadPosRankSum=-1.099;VQSLOD=1.3129;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,2:33:15.88:16,0,557	0/1:4,2:6:1:1,0,47	0/0:11,0:3:6.02:0,6,96	0/0:12,0:7:15.01:0,15,221	0/1:7,1:8:0:0,0,0	0/1:14,3:18:26.06:26,0,58	0/1:28,4:32:99:100,0,119	0/1:28,2:27:99:111,0,893	0/1:16,1:18:41.45:41,0,313	0/1:16,4:20:99:146,0,558	0/0:6,1:7:2.37:0,2,61	0/1:15,7:24:99:264,0,433	0/1:9,1:10:9.46:9,0,414	0/1:12,3:14:38.28:38,0,247	1/1:12,2:14:4.19:21,4,0	0/1:8,3:11:17.98:18,0,137	0/1:22,2:24:55.92:56,0,505	0/0:11,0:9:24.08:0,24,482	0/0:11,0:4:11.90:0,12,112	1/1:2,2:4:3:34,3,0	0/1:14,1:15:4.68:18,0,5	./.	0/0:10,0:10:3.48:0,3,64	0/1:23,3:27:37.41:37,0,231	0/0:10,0:10:7.42:0,7,123	0/0:27,1:27:20.77:0,21,1269	0/0:9,0:9:18.32:0,18,166	./.
chr10	105576520	.	T	TGTGC	1383	PASS	AB=0.952;AC=20;AF=0.370;AN=54;BaseQRankSum=2.091;DP=529;FS=4.173;HRun=0;HaplotypeScore=202.5089;InbreedingCoeff=0.2309;MQ=39.29;MQ0=9;MQRankSum=-2.224;QD=5.38;ReadPosRankSum=-0.464;VQSLOD=2.4397;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:45.02:0,45,604	1/1:6,0:6:0.89:2,1,0	0/1:23,0:8:5.83:6,0,141	0/0:21,0:14:18.99:0,19,306	./.	0/1:13,4:18:39.78:141,0,40	1/1:28,7:35:8.55:265,9,0	0/1:28,5:30:0.13:506,0,0	0/0:25,0:25:30.27:0,30,363	0/1:24,0:24:13.87:14,0,367	0/1:10,0:10:38.74:39,0,50	0/0:28,0:28:23.83:0,24,301	0/0:10,0:10:27.48:0,27,413	0/0:20,0:19:38.10:0,38,426	0/1:18,0:18:6.79:7,0,25	0/0:17,0:17:13.13:0,13,129	0/1:28,0:30:5.90:6,0,351	0/0:16,0:14:36.05:0,36,500	0/1:13,0:8:25.40:99,0,25	0/1:5,0:5:0:0,0,0	0/0:12,3:15:7.23:0,7,26	1/1:17,0:17:3:25,3,0	0/0:11,0:11:6:0,6,77	0/0:31,0:31:8.62:0,9,394	1/1:0,9:12:8.94:115,9,0	0/0:34,0:33:41.11:0,41,686	1/1:5,3:9:8.38:313,8,0	0/1:3,0:3:1:1,0,19
chr10	105576526	.	T	TGC	390.75	PASS	AB=0.987;AC=13;AF=0.232;AN=56;BaseQRankSum=6.554;DP=527;FS=38.117;HRun=0;HaplotypeScore=149.6293;InbreedingCoeff=0.4187;MQ=41.11;MQ0=9;MQRankSum=-6.299;QD=2.94;ReadPosRankSum=-0.632;VQSLOD=1.3619;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:35.29:0,35,631	1/1:5,0:5:6.03:27,6,0	0/0:25,0:8:24.08:0,24,328	0/0:24,0:16:42:0,42,554	0/0:15,0:15:3.01:0,3,44	1/1:14,0:14:8.37:61,8,0	0/1:31,0:31:28.04:28,0,212	0/1:24,0:21:96.69:140,0,97	0/0:26,0:26:33.07:0,33,460	0/0:22,0:22:50.88:0,51,679	0/0:9,0:9:9.01:0,9,98	0/0:21,0:21:35.68:0,36,434	0/0:10,0:10:27.04:0,27,385	0/0:19,0:18:38.65:0,39,522	0/0:19,0:18:11.01:0,11,113	0/0:18,0:18:23.63:0,24,222	0/0:30,0:30:35.91:0,36,543	0/0:19,0:17:39.10:0,39,570	0/1:13,1:9:21.12:21,0,117	0/1:5,0:5:10.71:11,0,11	1/1:16,1:18:13.96:80,14,0	0/0:18,0:18:9.02:0,9,116	0/0:13,0:13:8.91:0,9,137	0/0:28,0:28:32.07:0,32,498	0/1:14,0:14:8.91:9,0,124	0/0:36,0:35:75.05:0,75,1040	1/1:5,3:8:22.72:180,23,0	0/0:5,0:5:15:0,15,177
chr10	105577710	.	TCTG	T	2997.13	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.985;DP=498;FS=3.202;HRun=0;HaplotypeScore=102.3355;InbreedingCoeff=0.9838;MQ=56.25;MQ0=1;MQRankSum=-14.044;QD=27.75;ReadPosRankSum=-0.448;VQSLOD=3.8134;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.30:0,96,2259	1/1:0,6:6:18.05:209,18,0	0/0:15,0:11:28.34:0,28,520	0/0:29,0:25:62.99:0,63,1489	0/0:10,0:10:27.09:0,27,622	1/1:1,11:12:35.32:387,35,0	1/1:1,25:26:67.63:726,68,0	1/1:0,14:14:42.13:509,42,0	0/0:19,0:19:57.20:0,57,1405	0/0:18,0:18:54.18:0,54,1267	0/0:7,0:7:21.07:0,21,483	0/0:26,0:26:78.27:0,78,1883	0/0:23,0:23:66.23:0,66,1619	0/0:23,0:23:69.24:0,69,1672	0/0:15,0:15:45.14:0,45,1058	0/0:20,0:20:60.19:0,60,1377	0/0:33,0:33:99:0,99,2440	0/0:31,0:31:90.31:0,90,2162	1/1:1,8:8:24.06:284,24,0	1/1:1,11:12:27.01:290,27,0	1/1:1,10:11:13.83:165,14,0	0/0:14,0:13:36.12:0,36,816	0/0:10,0:10:30.10:0,30,729	0/0:33,0:33:99:0,99,2432	0/0:14,0:14:42.14:0,42,1035	0/0:14,0:14:39.13:0,39,962	1/1:0,18:18:54.16:633,54,0	0/0:3,0:3:9.03:0,9,213
chr10	105577714	.	AGTTC	A	3784.54	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.092;DP=490;FS=3.215;HRun=0;HaplotypeScore=109.7888;InbreedingCoeff=0.9768;MQ=57.70;MQ0=1;MQRankSum=-14.002;QD=35.37;ReadPosRankSum=-0.433;VQSLOD=3.5232;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,2862	1/1:0,6:6:18.06:251,18,0	0/0:14,0:11:27.56:0,28,703	0/0:31,0:28:84.27:0,84,2159	0/0:8,0:8:24.08:0,24,646	1/1:1,11:12:35.91:469,36,0	1/1:1,25:26:66.43:845,66,0	1/1:2,14:16:48.14:660,48,0	0/0:19,0:19:57.20:0,57,1652	0/0:16,0:16:48.16:0,48,1392	0/0:8,0:8:24.08:0,24,687	0/0:24,0:24:72.25:0,72,2081	0/0:23,0:23:69.24:0,69,1945	0/0:23,0:23:69.24:0,69,1956	0/0:14,0:14:42.14:0,42,1166	0/0:19,0:19:57.18:0,57,1553	0/0:33,0:33:99:0,99,2806	0/0:30,0:30:90.31:0,90,2602	1/1:0,8:7:21.07:307,21,0	1/1:0,11:11:25.33:330,25,0	1/1:0,10:10:15.11:164,15,0	0/0:13,0:13:36.12:0,36,1036	0/0:11,0:11:33.11:0,33,947	0/0:32,0:32:96.33:0,96,2779	0/0:14,0:14:42.14:0,42,1217	0/0:14,0:14:42.14:0,42,1170	1/1:0,18:18:54.18:758,54,0	0/0:2,0:2:6.02:0,6,174
chr10	105580491	.	AC	A	218.23	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.619;DP=653;FS=1.298;HRun=2;HaplotypeScore=71.4173;InbreedingCoeff=0.9977;MQ=80.65;MQ0=0;MQRankSum=-1.778;QD=27.28;ReadPosRankSum=-0.327;VQSLOD=3.2133;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.28:0,87,1284	1/1:0,8:8:24.08:312,24,0	0/0:19,0:19:54.03:0,54,701	0/0:31,0:30:52.83:0,53,838	0/0:23,0:23:66.22:0,66,986	0/0:20,0:20:54.18:0,54,809	0/0:26,0:26:78.25:0,78,1148	0/0:22,0:22:66.22:0,66,988	0/0:31,0:31:90.30:0,90,1346	0/0:21,0:21:63.21:0,63,944	0/0:13,0:13:39.13:0,39,583	0/0:42,0:42:99:0,126,1851	0/0:14,0:14:42.14:0,42,630	0/0:23,0:23:69.23:0,69,1031	0/0:31,0:31:93.32:0,93,1393	0/0:25,0:25:75.25:0,75,1124	0/0:35,0:35:99:0,105,1548	0/0:24,0:24:72.20:0,72,1035	0/0:12,0:12:36.12:0,36,523	0/0:19,0:19:54.16:0,54,769	0/0:34,0:34:99:0,99,1445	0/0:16,0:16:48.16:0,48,700	0/0:18,0:18:54.18:0,54,809	0/0:26,0:26:78.26:0,78,1167	0/0:23,0:23:66.21:0,66,970	0/0:26,0:26:75.25:0,75,1123	0/0:22,0:22:66.20:0,66,949	0/0:19,0:19:57.19:0,57,849
chr10	105581138	.	CAA	C	1094.34	PASS	AB=0.747;AC=18;AF=0.321;AN=56;BaseQRankSum=4.855;DP=582;FS=0.970;HRun=17;HaplotypeScore=89.4546;InbreedingCoeff=0.7444;MQ=55.03;MQ0=9;MQRankSum=-2.281;QD=5.61;ReadPosRankSum=2.473;VQSLOD=-0.2525;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:45:62.38:0,62,863	1/1:7,8:16:1.86:162,2,0	0/0:18,0:11:4.04:0,4,84	0/0:13,1:7:2.06:0,2,22	0/0:12,0:18:41.87:0,42,411	1/1:11,2:28:33.19:163,33,0	1/1:5,0:18:26.54:112,27,0	1/1:16,12:29:28.49:204,28,0	0/0:18,0:20:32.49:0,32,326	0/0:19,0:22:26.97:0,27,281	0/0:19,0:23:35.36:0,35,306	0/1:17,2:23:11.94:12,0,179	0/0:12,0:16:22.42:0,22,222	0/0:22,0:23:39.67:0,40,344	0/0:19,1:22:14.55:0,15,309	0/0:18,0:23:53.95:0,54,524	0/0:29,0:30:52.02:0,52,519	0/0:19,0:20:38.80:0,39,408	0/1:11,7:17:8.02:124,0,8	1/1:7,12:18:12.37:205,12,0	1/1:6,5:12:9.66:79,10,0	0/0:13,0:13:26.69:0,27,245	0/0:13,0:17:31.71:0,32,292	0/0:22,0:23:40.90:0,41,372	1/1:5,0:14:21.71:92,22,0	0/0:26,0:28:47.48:0,47,673	1/1:9,6:15:19.93:136,20,0	0/0:8,0:6:11.50:0,11,106
chr10	105583419	.	AT	A	4812.78	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-12.120;DP=451;FS=1.675;HRun=12;HaplotypeScore=79.4412;InbreedingCoeff=0.9158;MQ=72.32;MQ0=2;MQRankSum=7.978;QD=16.15;ReadPosRankSum=1.804;VQSLOD=5.9601;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:62.75:487,63,0	0/0:4,0:4:2.74:0,3,12	0/0:22,0:12:16.79:0,17,125	0/0:18,1:14:10.23:0,10,187	1/1:9,17:26:49.54:370,50,0	0/0:13,0:13:22.04:0,22,98	0/0:18,0:18:19.08:0,19,83	0/0:17,0:17:25.04:0,25,117	1/1:3,8:11:11.93:93,12,0	1/1:4,22:26:65.66:500,66,0	1/1:1,12:14:31.86:233,32,0	1/1:8,17:26:40.85:308,41,0	1/1:5,17:22:41.83:325,42,0	1/1:1,8:9:23.91:186,24,0	1/1:3,13:16:38.78:295,39,0	1/1:2,7:9:17.92:139,18,0	1/1:2,28:29:68.74:534,69,0	1/1:5,15:20:41.77:320,42,0	0/0:12,0:12:19.37:0,19,92	0/0:11,0:11:19.21:0,19,84	0/0:13,0:13:19.44:0,19,89	1/1:1,9:10:11.07:170,11,0	1/1:3,12:15:32.87:255,33,0	1/1:4,12:16:38.15:276,38,0	0/0:16,0:16:21.81:0,22,95	1/1:5,13:19:40.86:308,41,0	0/0:7,0:7:8.23:0,8,36	1/1:3,0:3:2.84:14,3,0
chr10	105583424	.	T	TA	1993.35	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=5.625;DP=424;FS=5.472;HRun=0;HaplotypeScore=87.5346;InbreedingCoeff=0.9574;MQ=73.72;MQ0=3;MQRankSum=-10.538;QD=22.65;ReadPosRankSum=-0.869;VQSLOD=4.7777;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:65.64:0,66,488	1/1:2,1:3:9:82,9,0	0/0:26,0:14:28.28:0,28,250	0/0:20,0:14:16.89:0,17,232	0/0:25,0:25:68.59:0,69,517	1/1:0,12:12:24.07:273,24,0	1/1:7,5:12:35.79:316,36,0	1/1:5,8:13:32.98:329,33,0	0/0:10,0:10:17.94:0,18,142	0/0:26,0:25:74.68:0,75,584	0/0:15,0:15:38.58:0,39,283	0/0:25,0:25:56.75:0,57,440	0/0:20,0:20:47.73:0,48,354	0/0:8,0:8:23.86:0,24,177	0/0:14,0:14:41.77:0,42,313	0/0:10,0:10:23.87:0,24,180	0/0:30,0:29:68.61:0,69,508	0/0:18,0:18:50.58:0,51,382	1/1:7,2:9:26.82:214,27,0	1/1:2,7:9:27:284,27,0	1/1:5,5:10:29.93:279,30,0	0/0:11,0:11:26.87:0,27,218	0/0:14,0:14:32.81:0,33,243	0/0:16,0:16:41.83:0,42,334	1/1:0,14:14:24.07:273,24,0	0/0:19,0:19:53.75:0,54,413	1/1:3,3:6:17.82:155,18,0	0/0:3,0:3:3.01:0,3,30
chr10	105583436	.	G	GT	1538.62	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=9.260;DP=380;FS=13.250;HRun=0;HaplotypeScore=74.6675;InbreedingCoeff=0.9049;MQ=67.91;MQ0=24;MQRankSum=-9.774;QD=31.40;ReadPosRankSum=-1.109;VQSLOD=2.0254;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:25:63.21:0,63,875	1/1:0,1:1:3.01:47,3,0	0/0:20,0:11:20.22:0,20,217	0/0:16,0:9:20.53:0,21,202	0/0:22,0:22:63.21:0,63,872	1/1:0,7:7:21.07:278,21,0	1/1:1,5:5:15.05:204,15,0	1/1:2,8:8:21.07:316,21,0	0/0:6,0:6:12.04:0,12,167	0/0:23,0:22:66.22:0,66,923	0/0:20,0:20:50.86:0,51,698	0/0:21,0:19:42.12:0,42,557	0/0:20,0:20:48.16:0,48,662	0/0:10,0:10:30.10:0,30,417	0/0:13,0:13:36.12:0,36,503	0/0:10,0:10:27.09:0,27,360	0/0:33,0:28:69.23:0,69,962	0/0:20,0:18:45.11:0,45,596	1/1:0,2:2:6.02:94,6,0	1/1:1,7:7:21.06:257,21,0	1/1:0,5:5:15.04:168,15,0	0/0:13,0:13:36.12:0,36,496	0/0:19,0:17:39.13:0,39,538	0/0:17,0:17:39.11:0,39,508	1/1:0,7:7:21.07:279,21,0	0/0:18,0:18:54.16:0,54,731	1/1:0,3:3:9.02:98,9,0	0/0:2,0:2:3.01:0,3,41
chr10	105584182	.	GCACACACACACACACACACA	G	1778.15	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=3.280;DP=439;FS=2.528;HRun=0;HaplotypeScore=215.3189;InbreedingCoeff=0.7794;MQ=74.45;MQ0=2;MQRankSum=-6.575;QD=27.36;ReadPosRankSum=-0.592;VQSLOD=2.7508;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:21.06:0,21,1403	0/0:4,0:4:3.01:0,3,263	./.	0/0:19,0:18:9.03:0,9,262	0/0:13,0:13:16.55:0,17,1360	1/1:17,6:23:18.06:961,18,0	1/1:18,2:19:3.01:160,3,0	0/0:16,0:16:26.67:0,27,1380	0/0:10,0:10:21.07:0,21,1650	0/0:12,0:13:24.08:0,24,1790	0/0:11,0:11:16.58:0,17,1356	0/0:14,0:15:39.13:0,39,3204	0/0:5,0:6:15.05:0,15,1203	0/0:7,0:11:21.07:0,21,1566	0/0:17,0:17:36.12:0,36,2826	0/0:17,0:20:39.13:0,39,3228	0/0:21,0:24:40.82:0,41,2587	0/0:12,0:14:21.07:0,21,1432	0/0:16,0:15:21.07:0,21,1267	0/0:19,0:19:25.75:0,26,2018	0/0:26,0:26:28.67:0,29,2677	0/0:10,0:10:12.18:0,12,1041	0/0:9,0:10:15.05:0,15,1301	0/0:18,0:21:33.11:0,33,2457	1/1:12,10:22:15.05:784,15,0	0/0:18,0:18:36.12:0,36,2690	0/0:9,0:14:15.52:0,16,1085	0/0:2,0:2:6.02:0,6,561
chr10	105585870	.	GCT	G	6954.82	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.862;DP=579;FS=3.480;HRun=0;HaplotypeScore=71.0983;InbreedingCoeff=0.9944;MQ=79.40;MQ0=1;MQRankSum=0.845;QD=35.30;ReadPosRankSum=-1.286;VQSLOD=6.6012;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,114,2056	1/1:0,5:5:15.05:215,15,0	0/0:13,0:13:34.36:0,34,547	0/0:18,0:18:42.07:0,42,608	0/0:11,0:11:30.10:0,30,549	1/1:1,12:13:30.10:430,30,0	1/1:3,43:46:99:1633,114,0	1/1:4,25:29:69.23:981,69,0	0/0:17,0:17:48.15:0,48,843	0/0:19,0:19:54.18:0,54,957	0/0:9,0:9:24.08:0,24,431	0/0:29,0:29:84.27:0,84,1493	0/0:19,0:19:54.19:0,54,981	0/0:22,0:22:66.23:0,66,1209	0/0:28,0:28:78.25:0,78,1400	0/0:19,0:19:57.20:0,57,1038	0/0:40,0:40:99:0,117,2080	0/0:23,0:23:63.19:0,63,1114	1/1:0,13:13:39.13:558,39,0	1/1:2,7:9:18.06:258,18,0	1/1:0,52:51:99:1762,123,0	0/0:7,0:7:21.07:0,21,377	0/0:8,0:8:24.08:0,24,433	0/0:27,0:27:78.27:0,78,1419	1/1:0,12:12:30.10:430,30,0	0/0:16,0:16:45.15:0,45,819	1/1:0,18:18:48.16:688,48,0	0/0:11,0:11:24.08:0,24,437
chr10	105588788	.	GCCCTACCGT	G	4027.31	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.693;DP=679;FS=32.377;HRun=0;HaplotypeScore=184.8905;InbreedingCoeff=0.9998;MQ=67.72;MQ0=0;MQRankSum=-10.734;QD=69.44;ReadPosRankSum=-0.255;VQSLOD=1.9728;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,5508	0/0:10,0:10:30.10:0,30,1472	0/0:25,0:25:69.56:0,70,2730	0/0:22,0:22:63.21:0,63,2624	0/0:25,0:25:72.25:0,72,3470	1/1:1,19:20:48.16:1393,48,0	1/1:4,16:20:39.13:1206,39,0	0/0:23,0:23:60.19:0,60,2593	0/0:30,0:30:90.31:0,90,4249	0/0:27,0:27:78.27:0,78,3717	0/0:28,0:28:78.27:0,78,3713	0/0:25,0:25:72.25:0,72,3412	0/0:25,0:25:69.24:0,69,3273	0/0:13,0:13:39.13:0,39,1913	0/0:27,0:27:81.28:0,81,3968	0/0:22,0:22:66.23:0,66,3110	0/0:33,0:33:96.30:0,96,4403	0/0:31,0:31:90.25:0,90,3901	0/0:29,0:29:87.30:0,87,3791	0/0:25,0:25:75.26:0,75,3518	0/0:28,0:28:84.29:0,84,3960	0/0:19,0:19:57.20:0,57,2722	0/0:20,0:20:60.21:0,60,2845	0/0:20,0:20:57.20:0,57,2594	1/1:1,17:18:48.16:1429,48,0	0/0:33,0:32:93.32:0,93,4394	0/0:24,0:23:72.25:0,72,3355	0/0:19,0:19:57.20:0,57,2792
chr10	105591112	.	GA	G	718.31	PASS	AB=0.724;AC=10;AF=0.185;AN=54;BaseQRankSum=3.841;DP=471;FS=0.674;HRun=8;HaplotypeScore=106.8947;InbreedingCoeff=0.3888;MQ=42.58;MQ0=22;MQRankSum=-5.726;QD=6.41;ReadPosRankSum=2.561;VQSLOD=0.7620;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:56.88:0,57,611	1/1:4,5:9:14.91:136,15,0	0/0:3,0:1:2.97:0,3,20	./.	0/0:31,1:31:54.10:0,54,628	1/1:5,7:9:15.02:142,15,0	0/1:6,7:8:7.95:47,0,8	1/1:11,7:17:2.76:177,3,0	0/0:16,0:16:32.66:0,33,331	0/0:28,0:27:60.61:0,61,691	0/0:13,1:13:1.39:0,1,267	0/0:18,0:16:35.86:0,36,326	0/0:12,0:11:26.94:0,27,270	0/0:14,0:13:27.07:0,27,315	0/0:21,0:21:35.55:0,36,365	0/0:16,0:16:33.05:0,33,348	0/0:24,0:23:36.06:0,36,408	0/0:19,0:19:45.03:0,45,486	0/1:12,5:17:46.46:111,0,46	0/1:18,7:22:58.84:81,0,59	0/0:10,2:8:0:0,0,0	0/0:12,0:12:24.07:0,24,288	0/0:27,0:26:39.11:0,39,459	0/0:12,0:12:11.99:0,12,128	0/0:7,3:10:4.04:0,4,12	0/0:11,0:9:15.05:0,15,180	0/1:10,8:18:13.12:171,0,13	0/0:19,0:15:33.94:0,34,371
chr10	105591120	.	AGAACC	A	776.84	PASS	AB=0.934;AC=8;AF=0.143;AN=56;BaseQRankSum=2.700;DP=503;FS=1.383;HRun=0;HaplotypeScore=102.5446;InbreedingCoeff=-0.1067;MQ=41.32;MQ0=21;MQRankSum=-3.350;QD=5.63;ReadPosRankSum=-3.234;VQSLOD=0.7840;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:40:73.28:0,73,1497	0/0:7,0:7:14.20:0,14,83	0/0:5,0:1:3.01:0,3,58	0/0:3,0:2:2.98:0,3,21	0/0:34,0:34:76.32:0,76,1557	0/1:13,2:12:49.87:50,0,74	0/0:17,0:12:0.44:0,0,67	0/1:16,0:15:76.28:76,0,302	0/0:15,0:15:39.06:0,39,631	0/0:28,0:27:66.92:0,67,1457	0/1:20,0:20:13.31:13,0,922	0/0:21,0:19:47.21:0,47,836	0/0:13,0:12:30.07:0,30,502	0/0:14,0:13:29.99:0,30,650	0/0:22,0:22:50.88:0,51,923	0/0:16,0:16:36.02:0,36,772	0/0:26,0:25:27.96:0,28,987	0/0:20,0:20:54:0,54,990	0/1:16,1:17:99:239,0,214	0/1:23,0:20:99:134,0,136	0/1:7,0:3:0:0,0,0	0/0:13,0:13:35.69:0,36,685	0/0:25,0:25:62.59:0,63,1112	0/0:12,0:12:19.58:0,20,375	0/1:10,12:21:92.97:315,0,93	0/0:13,0:11:33.06:0,33,504	0/1:18,0:17:76.10:76,0,172	0/0:18,0:14:39.11:0,39,763
chr10	105591432	.	GAAAT	G	7192.79	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.682;DP=585;FS=1.628;HRun=0;HaplotypeScore=105.1791;InbreedingCoeff=0.9965;MQ=78.80;MQ0=0;MQRankSum=-4.687;QD=40.41;ReadPosRankSum=-1.427;VQSLOD=4.9903;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.28:0,81,2007	1/1:2,5:7:15.05:270,15,0	0/0:20,0:19:44.94:0,45,999	0/0:14,0:14:30.06:0,30,672	0/0:37,0:37:99:0,102,2496	1/1:1,22:23:48.16:863,48,0	1/1:3,12:15:33.11:593,33,0	1/1:5,22:27:66.19:1089,66,0	0/0:24,0:24:66.23:0,66,1656	0/0:37,0:37:96.33:0,96,2466	0/0:24,0:24:63.22:0,63,1574	0/0:23,0:23:69.22:0,69,1704	0/0:19,0:19:51.18:0,51,1298	0/0:14,0:14:42.14:0,42,1091	0/0:20,0:20:57.18:0,57,1428	0/0:30,0:30:81.28:0,81,2097	0/0:11,0:11:30.10:0,30,743	0/0:18,0:18:51.18:0,51,1324	1/1:2,11:13:33.08:505,33,0	1/1:1,25:27:78.22:1367,78,0	1/1:4,17:21:33.11:593,33,0	0/0:20,0:20:54.19:0,54,1374	0/0:22,0:22:54.19:0,54,1366	0/0:9,0:9:21.07:0,21,546	1/1:1,20:21:51.17:891,51,0	0/0:26,0:26:57.20:0,57,1475	1/1:4,20:24:55.37:1021,55,0	0/0:11,0:11:33.11:0,33,857
chr10	105591959	.	G	GCA	214.47	PASS	AB=0.817;AC=2;AF=0.036;AN=56;BaseQRankSum=6.587;DP=614;FS=2.125;HRun=0;HaplotypeScore=86.3380;InbreedingCoeff=0.1977;MQ=67.36;MQ0=1;MQRankSum=-3.509;QD=5.64;ReadPosRankSum=-1.727;VQSLOD=2.8925;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:99:0,141,2069	0/0:6,0:6:18.06:0,18,275	0/0:15,0:14:9.29:0,9,283	0/0:4,0:4:5.89:0,6,60	0/0:17,0:17:51.17:0,51,776	0/1:19,0:19:22.99:23,0,192	0/0:29,0:29:84.16:0,84,482	0/0:16,0:16:35.94:0,36,458	0/0:20,0:20:60.19:0,60,878	0/0:26,0:26:72.20:0,72,1040	0/0:11,0:11:33.09:0,33,475	0/0:29,0:29:84.29:0,84,1279	0/0:25,0:25:75.09:0,75,1022	0/0:28,0:28:77.21:0,77,1070	0/0:24,0:24:66.16:0,66,953	0/0:10,0:10:30.06:0,30,391	0/0:34,0:34:99:0,102,1507	0/0:36,0:35:99:0,105,1506	0/0:22,0:22:59.64:0,60,797	0/0:13,0:13:39.13:0,39,595	0/0:56,0:56:99:0,165,2375	0/0:20,0:20:53.91:0,54,739	0/0:8,0:8:24.08:0,24,360	0/0:25,0:25:75.25:0,75,1138	0/1:8,11:19:3.41:280,0,3	0/0:24,0:24:72.18:0,72,1024	0/0:22,0:22:63.14:0,63,893	0/0:6,0:6:18.06:0,18,272
chr10	105591961	.	G	GCGCA	386.44	PASS	AB=0.874;AC=3;AF=0.054;AN=56;BaseQRankSum=3.537;DP=617;FS=10.859;HRun=0;HaplotypeScore=111.4419;InbreedingCoeff=-0.0571;MQ=67.32;MQ0=1;MQRankSum=-2.629;QD=5.68;ReadPosRankSum=-1.887;VQSLOD=0.9508;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:99:0,144,2522	0/0:7,0:7:21.05:0,21,365	0/0:12,0:14:9.11:0,9,269	0/0:4,0:4:3.01:0,3,57	0/0:19,0:19:51.17:0,51,958	0/1:18,0:18:3.01:3,0,357	0/1:32,0:32:8.78:9,0,725	0/0:17,0:17:30.06:0,30,485	0/0:20,0:20:60.16:0,60,1088	0/0:24,0:24:72.18:0,72,1273	0/0:11,0:11:33.09:0,33,587	0/0:31,0:31:90.28:0,90,1598	0/0:25,0:25:66.17:0,66,1149	0/0:27,0:27:75.13:0,75,1332	0/0:26,0:26:72.12:0,72,1191	0/0:9,0:9:27.04:0,27,420	0/0:34,0:34:99:0,99,1823	0/0:36,0:35:99:0,99,1808	0/0:21,0:21:60.53:0,61,934	0/0:13,0:13:39.13:0,39,721	0/0:57,0:57:99:0,165,2845	0/0:20,0:20:48.13:0,48,872	0/0:8,0:8:24.08:0,24,444	0/0:25,0:25:75.26:0,75,1367	0/1:7,10:18:71.99:459,0,72	0/0:24,0:24:63.22:0,63,1165	0/0:21,0:21:57.15:0,57,1033	0/0:6,0:6:18.06:0,18,340
chr10	105592865	.	C	CT	1660.70	PASS	AB=0.920;AC=11;AF=0.196;AN=56;BaseQRankSum=5.246;DP=609;FS=23.668;HRun=10;HaplotypeScore=103.0596;InbreedingCoeff=0.8366;MQ=62.16;MQ0=15;MQRankSum=0.476;QD=13.50;ReadPosRankSum=-2.956;VQSLOD=1.2911;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:53.87:0,54,437	1/1:10,3:13:29.91:263,30,0	0/0:33,0:13:11.16:0,11,143	0/0:40,0:13:1.38:0,1,103	0/0:27,0:27:39.07:0,39,318	0/0:12,0:12:23.92:0,24,194	0/0:13,0:13:20.95:0,21,170	1/1:32,0:32:73.64:603,74,0	0/0:20,0:19:29.81:0,30,246	0/0:34,0:32:77.36:0,77,613	0/0:9,0:9:23.89:0,24,189	0/0:31,0:31:44.10:0,44,345	0/0:19,0:19:11.28:0,11,187	0/0:15,0:15:7.01:0,7,160	0/0:14,0:15:31.99:0,32,252	0/0:17,0:17:32.83:0,33,271	0/0:29,0:28:53.87:0,54,442	0/0:35,0:34:46.49:0,46,366	0/1:21,2:22:2.43:311,0,2	1/1:25,1:26:48.19:407,48,0	1/1:10,0:10:18.02:177,18,0	0/0:14,0:14:26.93:0,27,217	0/0:11,0:11:26.82:0,27,212	0/0:18,0:19:40.93:0,41,322	0/0:22,0:21:47.85:0,48,380	0/0:17,0:16:17.55:0,18,147	1/1:19,0:19:8.97:71,9,0	0/0:25,0:24:20.76:0,21,312
chr10	105592874	.	TTC	T	2592.15	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=8.386;DP=636;FS=6.982;HRun=0;HaplotypeScore=96.3254;InbreedingCoeff=0.8568;MQ=59.87;MQ0=24;MQRankSum=-2.413;QD=11.47;ReadPosRankSum=-2.788;VQSLOD=2.4282;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:56.38:0,56,665	1/1:6,7:13:32.36:355,32,0	0/1:45,0:15:0.59:1,0,195	0/0:54,0:15:12.16:0,12,144	0/0:30,0:30:54.05:0,54,604	0/1:12,0:12:27.42:48,0,27	1/1:16,0:15:28.28:114,28,0	1/1:3,31:33:88.07:747,88,0	0/0:17,0:16:44.89:0,45,530	0/0:38,0:36:79.21:0,79,1028	0/0:11,0:11:31.17:0,31,269	0/0:25,0:25:46.26:0,46,574	0/0:15,0:15:37.62:0,38,404	0/0:14,0:14:27.61:0,28,250	0/0:14,0:14:30.94:0,31,369	0/0:19,0:19:47.89:0,48,507	0/0:28,0:27:64.23:0,64,695	0/0:32,0:30:79.20:0,79,810	1/1:17,8:24:38.90:509,39,0	1/1:2,20:22:58.73:533,59,0	1/1:10,2:11:16.34:158,16,0	0/0:12,0:12:27.79:0,28,282	0/0:14,0:14:21.70:0,22,361	0/0:18,0:18:37.83:0,38,528	1/1:27,0:26:16.67:175,17,0	0/0:15,0:14:12.83:0,13,345	1/1:1,19:20:15.33:157,15,0	0/0:27,0:26:28.90:0,29,528
chr10	105592876	.	CTT	C	1774.87	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=8.062;DP=635;FS=4.475;HRun=13;HaplotypeScore=100.0786;InbreedingCoeff=0.9750;MQ=59.68;MQ0=26;MQRankSum=-3.941;QD=9.86;ReadPosRankSum=-1.018;VQSLOD=2.2925;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:52.97:0,53,710	1/1:12,0:12:27.65:156,28,0	0/0:48,0:16:30.19:0,30,230	0/0:55,0:15:8.98:0,9,85	0/0:28,0:28:59.53:0,60,743	1/1:5,6:11:20.98:202,21,0	1/1:6,10:15:41.77:378,42,0	1/1:34,0:33:30.46:210,30,0	0/0:17,0:16:41.87:0,42,563	0/0:37,0:36:84.41:0,84,1075	0/0:10,0:11:26.57:0,27,342	0/0:23,0:23:44.83:0,45,511	0/0:14,0:15:35.09:0,35,406	0/0:13,0:13:23.78:0,24,261	0/0:15,0:15:24.08:0,24,341	0/0:18,0:19:47.51:0,48,621	0/0:24,0:27:57.62:0,58,669	0/0:29,0:30:60.79:0,61,835	1/1:24,0:24:28.56:209,29,0	1/1:22,0:22:30.43:158,30,0	1/1:10,0:10:11.39:47,11,0	0/0:11,0:12:22.77:0,23,259	0/0:14,0:14:35.57:0,36,446	0/0:17,0:18:41.05:0,41,526	1/1:12,14:26:56.86:564,57,0	0/0:13,0:13:35.30:0,35,434	1/1:22,0:22:9.82:62,10,0	0/0:24,0:26:54.71:0,55,541
chr10	105592900	.	C	CT	942.44	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=1.745;DP=605;FS=4.086;HRun=9;HaplotypeScore=82.6754;InbreedingCoeff=0.8501;MQ=55.68;MQ0=19;MQRankSum=-0.591;QD=8.12;ReadPosRankSum=0.068;VQSLOD=1.9445;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:26.85:0,27,229	0/0:13,0:13:26.93:0,27,227	0/0:42,1:13:13.36:0,13,141	0/1:52,0:12:0.06:0,0,80	0/0:27,2:29:5.56:0,6,278	1/1:3,7:10:21.05:225,21,0	1/1:6,16:20:22.06:458,22,0	0/0:20,0:19:32.94:0,33,286	0/0:15,0:14:23.90:0,24,207	0/0:32,0:32:50.83:0,51,442	0/0:15,0:16:35.95:0,36,309	0/0:24,0:24:47.94:0,48,412	0/0:11,0:12:16.84:0,17,136	0/0:12,0:12:26.95:0,27,227	0/0:15,0:15:23.94:0,24,208	0/0:21,0:21:38.54:0,39,338	0/0:35,0:35:65.86:0,66,571	0/0:31,0:30:49.95:0,50,421	0/0:17,0:16:23.98:0,24,208	0/0:18,0:18:41.93:0,42,357	0/0:8,0:7:14.99:0,15,130	0/0:8,0:8:17.97:0,18,153	0/0:18,0:18:32.88:0,33,283	0/0:18,0:17:35.95:0,36,305	1/1:17,15:32:16.05:398,16,0	0/0:22,0:22:26.97:0,27,347	0/0:23,0:23:38.71:0,39,338	0/0:13,0:14:22.25:0,22,169
chr10	105594492	.	C	CT	693.64	PASS	AB=0.882;AC=10;AF=0.179;AN=56;BaseQRankSum=-4.297;DP=556;FS=0.583;HRun=13;HaplotypeScore=73.2291;InbreedingCoeff=0.4674;MQ=65.60;MQ0=6;MQRankSum=-0.206;QD=4.42;ReadPosRankSum=-4.452;VQSLOD=0.4196;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:36,1:40:7.80:8,0,315	0/0:5,0:6:4.99:0,5,26	0/0:16,0:12:20.25:0,20,119	0/0:15,0:12:8.40:0,8,51	0/0:15,0:17:18.89:0,19,114	0/0:18,0:20:36.39:0,36,228	0/0:16,1:22:12.05:0,12,186	1/1:10,14:23:32.46:309,32,0	0/0:17,0:19:31.68:0,32,211	0/0:20,0:21:39.62:0,40,257	0/0:18,1:24:10.86:0,11,188	0/0:18,1:19:33.21:0,33,216	0/0:7,0:9:12.92:0,13,73	0/0:23,0:24:24.29:0,24,253	0/0:15,0:18:11.93:0,12,179	0/0:13,0:13:23.76:0,24,164	0/0:33,0:38:90.37:0,90,583	0/0:29,0:30:66.50:0,66,443	1/1:11,10:21:9.95:222,10,0	1/1:11,5:15:17.87:140,18,0	0/1:8,1:11:47.40:47,0,65	0/0:18,0:18:28.94:0,29,203	0/1:15,1:18:3.09:3,0,110	0/0:15,0:19:36.87:0,37,214	0/0:22,0:22:7.64:0,8,193	0/0:15,0:15:31.72:0,32,210	0/1:16,8:23:23.98:116,0,24	0/0:8,0:9:13.88:0,14,88
chr10	105597598	.	A	AC	7369.02	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-0.319;DP=552;FS=2.425;HRun=1;HaplotypeScore=61.3477;InbreedingCoeff=0.9764;MQ=74.17;MQ0=1;MQRankSum=-2.998;QD=41.63;ReadPosRankSum=-0.950;VQSLOD=4.9747;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,1292	1/1:0,8:8:24.08:358,24,0	0/0:9,0:9:24.07:0,24,311	0/0:11,0:11:27.09:0,27,348	0/0:3,0:3:9.03:0,9,117	0/0:12,0:12:33.09:0,33,413	0/0:32,0:32:93.26:0,93,1163	1/1:0,23:23:69.22:1013,69,0	0/0:15,0:15:42.13:0,42,533	0/0:19,0:19:54.18:0,54,701	0/0:4,0:4:12.04:0,12,156	0/0:29,0:29:87.25:0,87,1100	0/0:18,0:18:54.17:0,54,688	0/0:25,0:25:72.22:0,72,920	0/0:11,0:11:33.09:0,33,413	0/0:20,0:20:57.19:0,57,740	0/0:20,0:20:60.17:0,60,762	0/0:26,0:26:72.23:0,72,935	1/1:1,22:23:66.20:964,66,0	1/1:0,6:6:15.05:224,15,0	1/1:1,102:102:99:4225,283,0	0/0:11,0:11:33.11:0,33,428	0/0:11,0:11:30.08:0,30,375	0/0:32,0:32:90.27:0,90,1151	0/0:7,0:7:21.07:0,21,273	0/0:13,0:13:39.13:0,39,506	1/1:1,13:14:39.13:584,39,0	0/0:9,0:9:24.08:0,24,311
chr10	105597821	.	A	AT	1138.67	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.903;DP=378;FS=4.790;HRun=0;HaplotypeScore=46.2592;InbreedingCoeff=0.9055;MQ=76.23;MQ0=0;MQRankSum=-7.088;QD=25.30;ReadPosRankSum=-1.837;VQSLOD=3.6573;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:48.13:0,48,635	1/1:0,4:4:9.03:138,9,0	0/0:7,0:7:18.06:0,18,252	0/0:10,0:10:22.62:0,23,295	0/0:6,0:6:18.06:0,18,251	0/0:11,0:11:33.09:0,33,428	0/0:29,0:29:87.25:0,87,1166	1/1:0,8:8:24.08:374,24,0	0/0:18,0:18:51.17:0,51,705	0/0:15,0:15:42.14:0,42,587	0/0:4,0:4:12.04:0,12,167	0/0:36,0:36:99:0,105,1420	0/0:11,0:11:33.09:0,33,435	0/0:18,0:18:54.16:0,54,721	0/0:12,0:12:33.11:0,33,457	0/0:10,0:10:27.07:0,27,344	0/0:33,0:33:96.32:0,96,1333	0/0:25,0:24:72.21:0,72,981	1/1:0,4:4:12.04:182,12,0	1/1:0,3:3:6.02:74,6,0	1/1:0,20:20:18.43:268,18,0	0/0:6,0:6:12.03:0,12,141	0/0:1,0:1:3.01:0,3,42	0/0:25,0:25:75.15:0,75,952	0/0:12,0:12:33.10:0,33,431	0/0:13,0:13:39.09:0,39,495	1/1:0,6:6:18.06:279,18,0	0/0:11,0:11:32.83:0,33,412
chr10	105599211	.	T	TA	1151.11	PASS	AB=0.765;AC=17;AF=0.304;AN=56;BaseQRankSum=-0.328;DP=438;FS=13.320;HRun=13;HaplotypeScore=68.2766;InbreedingCoeff=0.4976;MQ=80.90;MQ0=3;MQRankSum=-1.338;QD=6.32;ReadPosRankSum=-3.660;VQSLOD=0.0537;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,2:30:32.66:0,33,356	0/1:2,3:5:8.57:72,0,9	0/1:36,1:21:29.65:55,0,30	0/0:30,0:22:4.82:0,5,53	0/0:10,0:12:22.83:0,23,150	1/1:5,2:17:20.05:114,20,0	1/1:3,2:12:19.85:137,20,0	0/1:11,12:23:22.32:240,0,22	0/0:15,0:16:28.76:0,29,191	0/1:12,2:14:1.16:1,0,134	0/0:15,0:16:23.73:0,24,164	0/0:6,0:6:14.35:0,14,90	0/0:5,0:6:7.95:0,8,47	0/0:12,0:12:19.89:0,20,141	0/0:11,0:11:12.41:0,12,82	0/0:12,1:13:1.91:0,2,157	0/0:18,1:20:3.87:0,4,160	0/0:17,0:18:31.74:0,32,211	0/1:9,7:16:69.84:134,0,70	1/1:7,8:15:20.85:173,21,0	1/1:7,8:15:15.02:139,15,0	0/0:5,0:5:2.90:0,3,20	0/0:7,1:8:8.81:0,9,60	0/0:17,0:17:29.71:0,30,205	1/1:2,2:13:20.54:144,21,0	0/0:20,0:21:21.28:0,21,230	1/1:5,6:13:14.85:126,15,0	0/0:15,0:15:26.54:0,27,175
chr10	105599372	.	CT	C	997.11	PASS	AB=0.745;AC=20;AF=0.370;AN=54;BaseQRankSum=2.610;DP=320;FS=0.579;HRun=14;HaplotypeScore=81.5584;InbreedingCoeff=0.2916;MQ=50.07;MQ0=2;MQRankSum=1.273;QD=5.63;ReadPosRankSum=2.756;VQSLOD=2.7242;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,3:37:3.26:0,3,460	1/1:2,1:3:2.97:21,3,0	0/0:3,0:3:3:0,3,28	./.	0/0:5,3:9:14.82:0,15,118	1/1:6,9:14:28.77:191,29,0	1/1:7,6:13:14.83:103,15,0	1/1:21,18:40:10.32:209,10,0	0/1:4,1:6:12.46:12,0,61	0/1:15,1:16:2.09:2,0,122	0/0:8,2:10:15.43:0,15,130	0/0:5,0:5:8.96:0,9,75	0/0:4,0:4:9.01:0,9,84	0/1:5,1:6:11.55:12,0,47	0/0:12,0:12:15.02:0,15,139	0/1:11,2:13:20.14:20,0,118	0/1:9,5:14:54.58:55,0,113	0/0:14,1:16:15.19:0,15,269	0/1:6,10:17:12.44:154,0,12	1/1:2,6:8:17.85:123,18,0	0/1:2,8:8:1.41:85,0,1	0/0:7,0:7:8.96:0,9,75	0/0:6,0:8:8.85:0,9,70	0/0:10,0:10:15.02:0,15,139	1/1:1,4:5:11.90:82,12,0	0/0:17,1:18:6.45:0,6,200	0/1:5,6:11:6.88:102,0,7	0/0:1,0:1:3:0,3,28
chr10	105599597	.	A	AC	2165.50	PASS	AC=40;AF=1.000;AN=40;DP=72;FS=0.000;HRun=0;HaplotypeScore=56.4485;InbreedingCoeff=-0.0989;MQ=28.66;MQ0=0;QD=30.50;VQSLOD=3.3821;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,2:4:3.01:41,3,0	1/1:0,1:1:3.01:41,3,0	./.	./.	1/1:1,5:6:12.04:162,12,0	1/1:0,2:2:6.02:82,6,0	1/1:0,5:5:15.05:206,15,0	1/1:0,3:1:3.01:40,3,0	./.	1/1:0,3:3:3.01:40,3,0	1/1:1,6:7:18.06:242,18,0	./.	./.	./.	1/1:0,2:2:3.01:41,3,0	1/1:1,4:5:12.04:165,12,0	1/1:0,2:2:6.02:82,6,0	1/1:0,1:1:3.01:41,3,0	1/1:0,3:3:9.03:121,9,0	1/1:0,7:7:21.07:286,21,0	1/1:0,3:3:9.03:122,9,0	./.	1/1:0,3:3:9.03:117,9,0	./.	1/1:1,3:4:9.03:122,9,0	1/1:1,2:3:6.02:82,6,0	1/1:1,5:6:12.04:164,12,0	1/1:0,1:1:3.01:41,3,0
chr10	105600359	.	T	TA	1302.49	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=1.402;DP=451;FS=2.540;HRun=7;HaplotypeScore=62.1586;InbreedingCoeff=0.8889;MQ=72.73;MQ0=5;MQRankSum=-1.718;QD=10.42;ReadPosRankSum=-3.267;VQSLOD=1.2054;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:41.61:0,42,327	1/1:3,0:3:2.90:16,3,0	0/0:36,0:15:16.02:0,16,167	0/0:26,0:13:18.87:0,19,140	0/0:11,0:11:17.95:0,18,150	1/1:16,0:16:11.68:110,12,0	1/1:21,1:21:27.01:248,27,0	1/1:6,9:15:17.91:146,18,0	0/0:10,0:10:20.96:0,21,184	0/0:17,0:17:35.69:0,36,295	0/0:7,0:7:8.99:0,9,81	0/0:25,0:25:32.93:0,33,293	0/0:6,0:6:2.98:0,3,29	0/0:15,0:15:23.91:0,24,203	0/0:20,0:20:44.93:0,45,397	0/0:19,0:19:18.52:0,19,358	0/0:26,0:26:46.51:0,47,402	0/0:12,0:12:23.91:0,24,214	1/1:4,14:18:38.76:371,39,0	1/1:0,10:10:14.89:110,15,0	1/1:12,4:16:20.52:236,21,0	0/0:13,0:13:29.94:0,30,260	0/0:16,0:16:35.31:0,35,260	0/0:25,0:25:61.66:0,62,512	1/1:13,0:13:26.39:179,26,0	0/0:15,0:15:29.96:0,30,261	1/1:12,0:11:13.16:90,13,0	0/0:2,0:2:3:0,3,29
chr10	105600366	.	A	AAG	1257.54	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=3.456;DP=461;FS=6.877;HRun=0;HaplotypeScore=68.5906;InbreedingCoeff=0.6559;MQ=71.16;MQ0=13;MQRankSum=-1.719;QD=9.46;ReadPosRankSum=-3.170;VQSLOD=1.4969;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:47.94:0,48,558	1/1:5,0:5:8.75:50,9,0	0/0:37,0:15:31.23:0,31,252	0/0:31,0:13:26.17:0,26,220	0/0:11,0:11:20.92:0,21,200	1/1:5,15:20:0.17:204,0,0	1/1:3,17:19:9.33:417,9,0	1/1:9,0:8:17.70:123,18,0	0/0:11,0:12:29.87:0,30,306	0/0:18,0:18:20.09:0,20,399	0/0:10,0:10:10.75:0,11,115	0/0:22,0:23:35.04:0,35,533	0/1:4,0:4:6.91:7,0,51	0/0:14,0:15:32.48:0,32,327	0/0:20,0:20:48.03:0,48,621	0/0:17,0:19:40.17:0,40,584	0/0:20,0:20:50.61:0,51,577	0/0:12,0:12:26.90:0,27,318	1/1:17,0:16:22.67:158,23,0	1/1:13,0:13:3.77:121,4,0	0/1:15,0:15:8.35:104,0,8	0/0:12,0:12:30.02:0,30,358	0/0:15,0:16:35.74:0,36,355	0/0:25,0:23:63.05:0,63,721	1/1:13,1:15:26.69:208,27,0	0/0:14,0:14:35.97:0,36,370	0/1:13,0:12:41.96:48,0,42	0/0:6,0:5:8.90:0,9,81
chr10	105600458	.	G	GA	565.89	PASS	AB=0.971;AC=18;AF=0.321;AN=56;BaseQRankSum=-3.336;DP=411;FS=0.683;HRun=12;HaplotypeScore=121.9762;InbreedingCoeff=0.6068;MQ=44.97;MQ0=12;MQRankSum=-0.934;QD=3.35;ReadPosRankSum=-0.145;VQSLOD=1.1240;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:13.49:0,13,258	1/1:4,0:5:2.68:11,3,0	0/0:5,0:3:8.76:0,9,57	0/1:6,0:5:0.94:6,0,1	0/0:14,0:15:37.49:0,37,256	1/1:7,14:20:24.04:232,24,0	1/1:7,6:11:16.27:148,16,0	1/1:29,0:27:1.24:12,1,0	0/0:11,0:11:23.67:0,24,166	0/0:22,0:22:47.93:0,48,323	0/0:6,0:7:11.92:0,12,86	0/0:20,0:21:30.30:0,30,197	0/0:17,0:16:37.57:0,38,266	0/0:16,1:16:5.46:0,5,185	0/0:17,1:20:6.23:0,6,168	0/0:6,0:6:11.90:0,12,87	0/1:19,3:22:8.02:8,0,260	0/0:11,0:11:24.75:0,25,177	1/1:23,0:21:2.16:24,2,0	1/1:13,0:13:2.84:14,3,0	0/1:4,0:3:0:0,0,0	0/0:11,1:12:0.81:0,1,153	0/0:8,1:9:12.86:0,13,90	0/0:9,0:7:14.90:0,15,109	1/1:4,11:16:29.88:271,30,0	0/0:21,1:22:23.92:0,24,323	0/1:15,0:12:0:0,0,0	0/0:15,0:14:20.83:0,21,153
chr10	105602321	.	ATTTTT	A	2049.31	PASS	AB=0.729;AC=12;AF=0.214;AN=56;BaseQRankSum=5.471;DP=363;FS=1.973;HRun=14;HaplotypeScore=83.2179;InbreedingCoeff=0.4447;MQ=60.66;MQ0=2;MQRankSum=-3.811;QD=16.66;ReadPosRankSum=3.238;VQSLOD=0.5181;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:26:60.20:0,60,1350	0/0:4,0:4:6.02:0,6,93	0/0:12,0:6:7.46:0,7,247	0/0:7,0:5:5.53:0,6,94	0/0:14,0:16:45.15:0,45,1003	1/1:3,22:25:39.04:646,39,0	1/1:1,8:9:18.02:298,18,0	0/1:18,2:30:99:418,0,376	0/0:7,0:7:21.07:0,21,512	0/0:11,0:12:27.09:0,27,587	0/0:19,0:19:45.60:0,46,962	0/0:11,0:11:32.76:0,33,554	0/0:8,0:8:24.08:0,24,609	0/0:7,0:7:18.06:0,18,321	0/0:4,0:4:9.03:0,9,226	0/0:14,0:14:36.12:0,36,846	0/0:27,0:29:72.25:0,72,1752	0/0:18,0:19:42.14:0,42,994	0/1:13,0:15:82.38:82,0,239	0/1:6,0:12:31:31,0,124	1/1:2,0:2:3.01:42,3,0	0/0:3,0:3:9.03:0,9,233	0/0:6,0:6:6.02:0,6,138	0/0:6,0:6:9.50:0,10,172	1/1:6,14:20:36.04:596,36,0	0/0:12,0:13:24.08:0,24,480	0/1:5,1:9:99:101,0,134	0/0:12,0:17:48.01:0,48,959
chr10	105602323	.	T	TATTATTA	2730.53	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.256;DP=363;FS=12.525;HRun=0;HaplotypeScore=103.6834;InbreedingCoeff=0.8743;MQ=60.33;MQ0=2;MQRankSum=-7.867;QD=39.01;ReadPosRankSum=-0.420;VQSLOD=2.2859;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:71.15:0,71,1359	1/1:1,0:5:6.02:189,6,0	0/0:13,0:6:12.12:0,12,155	0/0:7,0:5:10.33:0,10,147	0/0:16,0:16:48.10:0,48,849	0/0:25,0:25:51.17:0,51,1052	0/0:9,0:9:21.07:0,21,452	1/1:24,0:29:87.07:1112,87,0	0/0:7,0:7:21.06:0,21,466	0/0:12,0:12:36.12:0,36,782	0/0:18,0:19:29.68:0,30,1114	0/0:12,0:12:16.75:0,17,456	0/0:8,0:8:24.08:0,24,516	0/0:7,0:7:20.96:0,21,365	0/0:4,0:4:11.96:0,12,236	0/0:14,0:14:42.11:0,42,791	0/0:28,0:28:83.69:0,84,1753	0/0:18,0:18:51.10:0,51,986	1/1:5,7:13:33.08:868,33,0	1/1:8,2:11:14.97:388,15,0	1/1:1,0:3:2.97:25,3,0	0/0:3,0:3:9.03:0,9,206	0/0:6,0:6:9.02:0,9,160	0/0:7,0:7:7.93:0,8,120	0/0:20,0:20:54.13:0,54,980	0/0:14,0:14:39.04:0,39,652	1/1:6,1:8:20.96:323,21,0	0/0:18,0:18:34.20:0,34,826
chr10	105602513	.	AT	A	2991.84	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.036;DP=586;FS=1.791;HRun=7;HaplotypeScore=63.3939;InbreedingCoeff=0.9931;MQ=76.06;MQ0=1;MQRankSum=-2.197;QD=25.35;ReadPosRankSum=-1.009;VQSLOD=3.7934;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,1743	1/1:0,7:7:18.04:184,18,0	0/0:35,0:26:51.61:0,52,509	0/0:23,0:19:28.65:0,29,374	0/0:19,0:19:51.16:0,51,642	0/0:17,0:17:48.15:0,48,593	0/0:15,0:15:45.14:0,45,566	1/1:4,27:31:81.18:826,81,0	0/0:17,0:17:48.13:0,48,579	0/0:23,0:23:66.18:0,66,812	0/0:11,0:11:33.11:0,33,415	0/0:35,0:35:99:0,102,1283	0/0:19,0:19:48.15:0,48,602	0/0:18,0:18:54.17:0,54,675	0/0:21,0:21:60.19:0,60,755	0/0:30,0:30:87.25:0,87,1057	0/0:29,0:29:84.27:0,84,1057	0/0:17,0:17:51.15:0,51,628	1/1:1,23:24:69.15:702,69,0	1/1:0,15:15:39.08:397,39,0	1/1:2,27:29:75.17:765,75,0	0/0:12,0:12:33.11:0,33,415	0/0:6,0:6:18.06:0,18,226	0/0:24,0:24:68.23:0,68,822	0/0:21,0:21:60.19:0,60,751	0/0:21,0:21:60.19:0,60,754	1/1:0,12:12:30.07:306,30,0	0/0:5,0:5:15.05:0,15,188
chr10	105603223	.	GAAA	G	1434.80	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=3.790;DP=551;FS=9.167;HRun=16;HaplotypeScore=97.0240;InbreedingCoeff=0.9234;MQ=51.41;MQ0=10;MQRankSum=-1.873;QD=12.59;ReadPosRankSum=1.534;VQSLOD=1.0892;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:20:48.02:0,48,671	1/1:4,1:15:23.39:140,23,0	0/0:16,0:2:3.01:0,3,34	0/0:14,0:2:3.01:0,3,31	0/0:31,1:36:42.19:0,42,1004	0/0:11,0:13:30.10:0,30,444	0/0:14,0:19:42.10:0,42,606	1/1:7,12:19:32.55:311,33,0	0/0:12,0:15:39.09:0,39,575	0/0:20,0:22:54.12:0,54,820	0/0:18,0:19:42.13:0,42,710	0/0:22,0:23:38.98:0,39,500	0/0:19,0:22:47.45:0,47,663	0/0:16,0:17:38.84:0,39,527	0/0:20,0:27:67.29:0,67,900	0/0:14,0:15:30.02:0,30,456	0/0:28,0:31:67.75:0,68,1073	0/0:21,0:23:51.59:0,52,786	1/1:11,8:18:22.81:248,23,0	1/1:7,10:19:22.25:240,22,0	1/1:10,6:19:24.65:230,25,0	0/0:11,0:14:24.06:0,24,359	0/0:18,0:19:31.27:0,31,451	0/0:16,0:21:42.10:0,42,653	0/0:12,0:17:42.09:0,42,555	0/0:17,0:23:51.12:0,51,728	1/1:5,15:20:43.55:451,44,0	0/0:6,0:6:12.04:0,12,201
chr10	105603360	.	A	ATCTG	1913.10	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.378;DP=677;FS=0.722;HRun=0;HaplotypeScore=124.7974;InbreedingCoeff=0.9899;MQ=64.24;MQ0=0;MQRankSum=-1.772;QD=27.33;ReadPosRankSum=1.483;VQSLOD=3.7341;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,123,1914	0/0:11,0:11:27.09:0,27,463	0/0:17,0:15:24:0,24,285	0/0:23,0:22:35.84:0,36,485	0/0:35,0:35:68.38:0,68,1060	1/1:1,22:24:39.05:922,39,0	1/1:5,16:22:27.56:679,28,0	0/0:27,0:27:54.15:0,54,827	0/0:22,0:22:51.13:0,51,791	0/0:19,0:19:45.09:0,45,713	0/0:10,0:10:15.05:0,15,257	0/0:22,0:22:45.14:0,45,739	0/0:19,0:19:54.17:0,54,898	0/0:29,0:29:75.19:0,75,1168	0/0:31,0:31:78.24:0,78,1275	0/0:29,0:29:63.20:0,63,1046	0/0:34,0:34:87.21:0,87,1380	0/0:19,0:19:48.15:0,48,780	0/0:21,0:21:48.14:0,48,772	0/0:24,0:24:57.19:0,57,955	0/0:44,0:44:99:0,120,1938	0/0:21,0:21:38.96:0,39,615	0/0:18,0:18:45.13:0,45,704	0/0:17,0:17:42.10:0,42,656	1/1:4,18:24:18.06:453,18,0	0/0:25,0:25:63.17:0,63,999	0/0:26,0:26:48.15:0,48,795	0/0:14,0:14:42.08:0,42,660
chr10	105606221	.	CAG	C	8573.21	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.574;DP=689;FS=2.639;HRun=0;HaplotypeScore=81.4274;InbreedingCoeff=0.9995;MQ=88.15;MQ0=1;MQRankSum=-6.789;QD=38.10;ReadPosRankSum=-0.052;VQSLOD=6.8687;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.32:0,96,1764	1/1:0,12:12:30.10:441,30,0	0/0:25,0:25:71.94:0,72,1215	0/0:24,0:24:69.22:0,69,1232	0/0:25,0:25:69.22:0,69,1256	1/1:0,33:33:96.32:1412,96,0	1/1:1,12:13:30.10:441,30,0	1/1:1,33:34:96.22:1292,96,0	0/0:22,0:22:63.20:0,63,1135	0/0:29,0:29:84.29:0,84,1573	0/0:20,0:20:57.20:0,57,1059	0/0:35,0:35:99:0,102,1909	0/0:29,0:29:81.26:0,81,1483	0/0:21,0:21:60.19:0,60,1092	0/0:28,0:28:78.24:0,78,1398	0/0:38,0:38:99:0,108,1990	0/0:21,0:21:60.21:0,60,1123	0/0:10,0:10:27.09:0,27,490	1/1:0,15:15:45.15:662,45,0	1/1:2,27:29:75.25:1102,75,0	1/1:1,25:25:69.23:1014,69,0	0/0:22,0:22:66.21:0,66,1204	0/0:28,0:28:75.26:0,75,1396	0/0:22,0:22:63.22:0,63,1178	1/1:0,23:23:60.20:883,60,0	0/0:22,0:22:60.20:0,60,1088	1/1:2,38:40:90.30:1324,90,0	0/0:9,0:9:27.09:0,27,494
chr10	105606762	.	T	TAAC	1791.54	PASS	AB=0.719;AC=5;AF=0.096;AN=52;BaseQRankSum=-6.991;DP=495;FS=23.150;HRun=0;HaplotypeScore=99.4325;InbreedingCoeff=-0.1035;MQ=66.76;MQ0=1;MQRankSum=-6.454;QD=20.36;ReadPosRankSum=1.960;VQSLOD=1.9050;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:52.01:0,52,811	./.	0/0:26,0:15:22.35:0,22,450	0/0:16,0:9:17.23:0,17,254	0/0:26,0:26:58.06:0,58,925	0/1:11,14:25:40.14:580,0,40	0/0:13,0:11:5.77:0,6,32	0/1:14,8:20:63.51:452,0,64	0/0:22,0:22:57.19:0,57,1032	0/0:23,0:23:63.16:0,63,1031	0/0:17,0:17:36.11:0,36,612	0/0:19,0:19:51.28:0,51,822	0/0:20,0:20:45.14:0,45,749	0/0:22,0:22:59.65:0,60,933	0/0:30,0:30:72.22:0,72,1208	0/0:20,0:20:46.03:0,46,781	0/0:25,0:25:51.15:0,51,848	0/0:17,0:17:36.12:0,36,628	0/1:3,5:9:16.44:283,0,16	0/0:6,0:9:17.50:0,18,98	./.	0/0:18,0:18:48.11:0,48,782	0/0:11,0:11:21.06:0,21,352	0/0:16,0:16:33.07:0,33,537	0/1:7,0:7:33.30:33,0,55	0/0:21,0:21:54.06:0,54,905	0/1:10,14:23:49.79:560,0,50	0/0:11,0:11:33.11:0,33,571
chr10	105607028	.	A	AG	49.68	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=-3.805;DP=246;FS=23.425;HRun=0;HaplotypeScore=84.0379;InbreedingCoeff=0.3459;MQ=66.17;MQ0=2;MQRankSum=1.818;QD=0.78;ReadPosRankSum=-2.959;VQSLOD=-0.4968;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:11:0,11,48	1/1:0,1:1:0.47:1,0,0	0/0:16,0:10:20.80:0,21,177	0/1:10,0:5:23.23:23,0,35	0/0:15,0:15:34.04:0,34,180	0/0:6,0:6:2.98:0,3,8	0/0:2,0:2:0.94:0,1,2	0/1:8,0:8:0.94:1,0,13	0/0:13,0:10:18.43:0,18,105	0/0:15,0:13:31.81:0,32,216	0/1:10,0:10:10.44:10,0,55	0/0:8,0:8:14.73:0,15,106	0/0:9,0:8:12.95:0,13,68	0/0:9,0:8:10.15:0,10,71	0/0:11,0:10:8.11:0,8,49	0/0:14,0:13:20.47:0,20,120	0/0:11,0:10:18.70:0,19,151	0/1:12,0:12:23.76:24,0,68	1/1:4,3:4:5.97:44,6,0	1/1:4,1:3:2.03:22,2,0	1/1:4,1:5:0.38:1,0,0	0/0:10,0:10:15.44:0,15,95	0/0:8,0:8:14.66:0,15,79	0/0:7,0:7:7.49:0,7,44	0/0:2,0:1:2.04:0,2,6	0/0:9,0:7:9.22:0,9,47	1/1:5,0:5:6.48:54,6,0	0/0:2,0:2:5.92:0,6,40
chr10	105607041	.	GC	G	2517.50	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=1.292;DP=153;FS=54.317;HRun=1;HaplotypeScore=68.1276;InbreedingCoeff=0.4948;MQ=70.78;MQ0=0;MQRankSum=-4.246;QD=18.38;ReadPosRankSum=1.870;VQSLOD=0.5328;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,6:10:10.94:122,11,0	0/0:1,0:1:0:0,0,0	0/0:11,0:9:21.02:0,21,310	0/0:4,0:3:8.82:0,9,101	1/1:4,10:13:21:215,21,0	1/1:1,0:1:2.99:24,3,0	./.	1/1:1,0:1:2.22:7,2,0	1/1:1,8:7:20.57:193,21,0	1/1:0,10:9:27.06:319,27,0	1/1:2,6:7:17.95:162,18,0	1/1:1,4:5:11.95:106,12,0	1/1:0,7:5:15.04:165,15,0	1/1:2,3:5:9.03:109,9,0	1/1:0,4:3:5.96:54,6,0	1/1:6,3:8:20.63:164,21,0	1/1:1,8:8:20.98:234,21,0	1/1:2,4:6:15.03:174,15,0	1/1:2,0:2:5.39:23,5,0	1/1:3,0:1:2.68:11,3,0	1/1:2,0:2:5.17:20,5,0	1/1:0,8:8:15.04:174,15,0	1/1:3,4:6:6.02:70,6,0	1/1:1,4:5:6.02:70,6,0	1/1:2,0:1:1.55:4,2,0	1/1:0,5:3:9.02:98,9,0	1/1:1,0:1:2.97:20,3,0	1/1:0,3:3:9.03:104,9,0
chr10	105607049	.	CCG	C	3013.26	PASS	AB=0.800;AC=41;AF=0.932;AN=44;BaseQRankSum=0.599;DP=109;FS=47.558;HRun=0;HaplotypeScore=73.0512;InbreedingCoeff=0.2482;MQ=73.49;MQ0=0;MQRankSum=-3.962;QD=30.44;ReadPosRankSum=2.689;VQSLOD=2.3933;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:5:9.03:140,9,0	./.	0/0:8,0:6:8.90:0,9,146	0/1:3,1:4:12.51:13,0,31	1/1:0,10:9:18.06:276,18,0	./.	./.	1/1:0,2:2:6.02:97,6,0	1/1:0,7:5:15.05:233,15,0	1/1:0,8:7:21.07:330,21,0	1/1:0,6:5:9.03:138,9,0	1/1:0,4:4:6.02:93,6,0	1/1:0,7:5:15.05:224,15,0	1/1:0,3:3:8.96:108,9,0	1/1:0,1:1:3.01:45,3,0	1/1:0,4:3:9.03:141,9,0	1/1:0,7:7:18.06:276,18,0	1/1:0,5:5:15.05:238,15,0	1/1:0,1:1:3.01:49,3,0	./.	1/1:0,3:3:6.91:100,7,0	1/1:0,6:6:15.05:226,15,0	1/1:0,4:3:6.02:91,6,0	1/1:0,4:4:6.02:89,6,0	./.	1/1:1,3:2:6.01:72,6,0	./.	1/1:0,3:3:9.03:141,9,0
chr10	105607097	.	GA	G	693.02	PASS	AC=28;AF=0.875;AN=32;BaseQRankSum=3.757;DP=34;FS=0.000;HRun=1;HaplotypeScore=46.7297;InbreedingCoeff=0.2531;MQ=118.06;MQ0=0;MQRankSum=-2.775;QD=26.65;ReadPosRankSum=1.734;VQSLOD=3.4247;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:3.01:42,3,0	./.	0/0:6,0:6:18.05:0,18,240	0/0:2,0:2:3.01:0,3,48	1/1:0,5:5:3.01:42,3,0	./.	./.	./.	1/1:0,2:2:6.02:83,6,0	1/1:0,2:2:6.02:84,6,0	1/1:0,1:1:3.01:42,3,0	1/1:0,2:2:6.02:84,6,0	1/1:0,2:2:6.02:84,6,0	./.	./.	1/1:0,1:1:3.01:42,3,0	1/1:0,3:3:3.01:42,3,0	1/1:0,3:3:6.02:84,6,0	./.	./.	./.	./.	1/1:0,1:1:3.01:42,3,0	1/1:0,1:1:3.01:42,3,0	./.	1/1:0,1:1:3.01:42,3,0	./.	1/1:0,1:1:3.01:42,3,0
chr10	105607129	.	G	GT	1070.09	PASS	AC=28;AF=0.875;AN=32;BaseQRankSum=-2.176;DP=37;FS=11.303;HRun=0;HaplotypeScore=14.2923;InbreedingCoeff=0.2217;MQ=64.62;MQ0=0;MQRankSum=-2.361;QD=34.52;ReadPosRankSum=2.268;VQSLOD=1.8014;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:3.01:48,3,0	./.	0/0:1,0:1:3.01:0,3,42	0/0:1,0:1:2.37:0,2,8	1/1:0,5:5:5.99:88,6,0	1/1:0,2:2:6.02:95,6,0	./.	./.	1/1:0,1:1:3.01:48,3,0	./.	./.	./.	1/1:0,3:3:9.03:143,9,0	1/1:0,1:1:3.01:45,3,0	1/1:0,1:1:3.01:43,3,0	1/1:0,4:4:12.04:185,12,0	./.	./.	1/1:0,1:1:3.01:48,3,0	1/1:0,3:2:6.02:94,6,0	./.	1/1:0,3:3:6:91,6,0	1/1:0,1:1:3.01:48,3,0	./.	./.	./.	1/1:0,2:2:6.02:95,6,0	1/1:0,3:2:6.02:92,6,0
chr10	105609943	.	T	TA	2002.26	PASS	AB=0.859;AC=25;AF=0.446;AN=56;BaseQRankSum=10.019;DP=736;FS=1.150;HRun=15;HaplotypeScore=150.6761;InbreedingCoeff=0.4466;MQ=72.30;MQ0=8;MQRankSum=-9.059;QD=4.94;ReadPosRankSum=-1.155;VQSLOD=1.2430;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:40,9:49:73.97:74,0,255	1/1:5,0:5:10.71:45,11,0	0/0:34,0:18:5.30:0,5,74	0/0:47,1:23:16.33:0,16,96	0/0:22,0:24:27.02:0,27,155	1/1:26,0:26:53.54:300,54,0	1/1:19,0:19:36.52:183,37,0	1/1:21,0:21:40.45:169,40,0	0/0:14,3:18:8.32:0,8,140	0/0:31,0:34:22.42:0,22,198	0/0:15,1:17:1.42:0,1,96	0/1:26,1:29:18.74:19,0,160	0/0:17,0:19:40.04:0,40,235	0/1:6,14:22:12.28:133,0,12	0/0:30,0:32:48.31:0,48,354	0/1:18,5:24:28.91:29,0,164	0/1:23,2:27:16.60:17,0,227	0/0:25,1:28:28.74:0,29,276	1/1:19,0:18:32.26:135,32,0	1/1:30,0:30:60.71:270,61,0	1/1:14,0:14:32.09:129,32,0	0/0:28,2:31:17.98:0,18,254	0/0:16,0:20:20.79:0,21,153	0/0:22,3:25:5.36:0,5,247	1/1:28,0:28:47.90:245,48,0	0/1:24,6:32:79.29:107,0,79	1/1:48,0:47:84.10:345,84,0	0/1:10,0:10:2.66:3,0,68
chr10	105609953	.	A	AAC	5125.01	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=2.513;DP=780;FS=0.662;HRun=0;HaplotypeScore=135.4656;InbreedingCoeff=0.9984;MQ=66.27;MQ0=22;MQRankSum=-8.950;QD=23.30;ReadPosRankSum=2.750;VQSLOD=5.6377;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:52:99:0,107,1266	1/1:2,5:7:17.93:222,18,0	0/0:50,0:17:36.31:0,36,306	0/0:59,0:22:28.31:0,28,316	0/0:25,0:25:69.01:0,69,711	1/1:5,0:24:55.36:275,55,0	1/1:9,0:21:36.37:181,36,0	1/1:4,18:23:64.44:742,64,0	0/0:20,0:20:47.93:0,48,520	0/0:32,0:32:96.03:0,96,997	0/0:21,0:21:49.58:0,50,512	0/0:26,0:26:67.12:0,67,705	0/0:18,0:18:48.11:0,48,604	0/0:22,0:21:28.01:0,28,295	0/0:35,0:35:98.25:0,98,1149	0/0:22,0:22:59.84:0,60,673	0/0:28,0:28:73.06:0,73,797	0/0:29,0:29:83.96:0,84,941	1/1:3,17:19:53.27:640,53,0	1/1:9,21:30:71.93:909,72,0	1/1:6,9:15:41.86:543,42,0	0/0:30,0:30:79.89:0,80,916	0/0:17,0:17:48.08:0,48,541	0/0:27,0:27:74.67:0,75,861	1/1:10,0:27:48.61:254,49,0	0/0:35,0:34:89.73:0,90,794	1/1:16,31:49:99:1359,108,0	0/0:11,0:11:32.36:0,32,313
chr10	105609954	.	A	ACC	2649.78	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.586;DP=771;FS=1.245;HRun=0;HaplotypeScore=145.0484;InbreedingCoeff=0.9941;MQ=66.28;MQ0=22;MQRankSum=-6.803;QD=18.79;ReadPosRankSum=2.355;VQSLOD=3.9403;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,137,1938	1/1:7,0:7:14.83:139,15,0	0/0:50,0:17:31.34:0,31,395	0/0:59,0:22:16.87:0,17,409	0/0:24,0:24:69.21:0,69,1013	0/0:24,0:24:36.10:0,36,148	0/0:22,0:21:36.29:0,36,163	1/1:24,0:23:38.31:337,38,0	0/0:20,0:20:51.13:0,51,713	0/0:32,0:32:96.29:0,96,1387	0/0:21,0:21:57.15:0,57,788	0/0:25,0:25:69.19:0,69,969	0/0:18,0:18:48.16:0,48,754	0/0:23,0:22:39.06:0,39,527	0/0:34,0:34:99:0,99,1491	0/0:22,0:22:60.20:0,60,921	0/0:27,0:27:77.71:0,78,1118	0/0:29,0:29:84.26:0,84,1249	1/1:18,1:17:28.73:265,29,0	1/1:23,6:29:71.36:669,71,0	1/1:13,2:15:34.38:330,34,0	0/0:29,0:29:80.07:0,80,1206	0/0:17,0:17:48.14:0,48,661	0/0:27,0:27:75.24:0,75,1135	0/0:26,0:26:61.31:0,61,297	0/0:34,0:33:96.23:0,96,1289	1/1:35,11:46:99:1097,106,0	0/0:14,0:14:33.04:0,33,420
chr10	105609961	.	A	AAAACC	5524.56	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=10.263;DP=824;FS=21.941;HRun=0;HaplotypeScore=201.3209;InbreedingCoeff=0.8724;MQ=63.40;MQ0=23;MQRankSum=-9.511;QD=17.37;ReadPosRankSum=-2.288;VQSLOD=2.2719;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:65.61:0,66,1127	1/1:6,0:8:9.01:128,9,0	0/0:51,0:17:3.28:0,3,130	0/1:59,0:21:25.66:26,0,68	0/0:27,0:27:42.12:0,42,704	1/1:15,9:24:33.11:883,33,0	1/1:15,9:25:18.04:342,18,0	1/1:38,0:37:45.14:665,45,0	0/0:23,0:23:36.12:0,36,637	0/0:31,0:31:39.03:0,39,677	0/0:21,0:21:33.11:0,33,597	0/0:29,0:29:39.13:0,39,701	0/0:18,0:18:21.07:0,21,383	0/0:25,0:24:24.08:0,24,426	0/0:30,0:30:27.09:0,27,495	0/0:24,0:24:30.09:0,30,514	0/0:29,0:29:48.14:0,48,831	0/0:29,0:30:15.20:0,15,626	1/1:31,0:29:29.53:362,30,0	1/1:27,0:34:48.11:622,48,0	1/1:22,0:24:36.10:544,36,0	0/0:30,0:30:36.12:0,36,657	0/0:17,0:17:8.96:0,9,98	0/0:30,0:30:45.07:0,45,724	1/1:14,7:23:24.08:650,24,0	0/0:31,0:30:39.13:0,39,712	1/1:32,0:48:78.25:1303,78,0	0/0:10,0:10:21.07:0,21,384
chr10	105610352	.	C	CTTTG	3667.30	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.027;DP=629;FS=13.076;HRun=0;HaplotypeScore=105.6289;InbreedingCoeff=0.9771;MQ=63.08;MQ0=0;MQRankSum=1.854;QD=55.57;ReadPosRankSum=2.942;VQSLOD=4.5766;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:81.24:0,81,1352	0/0:11,0:11:33.11:0,33,593	0/0:16,0:12:23.80:0,24,243	0/0:6,0:5:9.03:0,9,148	0/0:33,0:33:87.25:0,87,1478	1/1:1,29:31:66.23:1686,66,0	1/1:1,11:14:33.11:814,33,0	0/0:30,0:30:66.19:0,66,1098	0/0:23,0:23:54.18:0,54,954	0/0:30,0:30:69.20:0,69,1178	0/0:26,0:26:72.21:0,72,1177	0/0:29,0:29:80.77:0,81,1408	0/0:26,0:26:69.19:0,69,1144	0/0:20,0:20:45.15:0,45,793	0/0:21,0:21:60.11:0,60,951	0/0:19,0:19:51.16:0,51,878	0/0:28,0:28:69.22:0,69,1189	0/0:20,0:20:57.16:0,57,982	0/0:16,0:16:33.08:0,33,530	0/0:38,0:38:99:0,105,1793	0/0:29,0:29:57.13:0,57,883	0/0:14,0:14:36.08:0,36,632	0/0:15,0:15:42.12:0,42,719	0/0:16,0:15:42.13:0,42,719	1/1:1,18:21:45.15:1168,45,0	0/0:24,0:24:57.18:0,57,964	0/0:31,0:31:81.23:0,81,1348	0/0:9,0:9:21.07:0,21,363
chr10	105611000	.	TAA	T	6160.53	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.124;DP=611;FS=4.477;HRun=8;HaplotypeScore=73.8882;InbreedingCoeff=0.9898;MQ=76.52;MQ0=0;MQRankSum=-0.158;QD=30.50;ReadPosRankSum=0.375;VQSLOD=4.9840;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.29:0,84,1416	1/1:0,9:9:21.07:256,21,0	0/0:19,0:19:42.10:0,42,633	0/0:11,0:11:23.45:0,23,370	0/0:35,0:35:99:0,99,1670	1/1:0,26:26:75.24:915,75,0	1/1:2,22:24:60.18:731,60,0	1/1:3,23:26:66.17:780,66,0	0/0:23,0:23:66.18:0,66,1085	0/0:29,0:29:75.25:0,75,1229	0/0:15,0:15:42.14:0,42,706	0/0:35,0:35:93.32:0,93,1558	0/0:22,0:22:66.22:0,66,1079	0/0:14,0:14:42.14:0,42,710	0/0:32,0:32:96.33:0,96,1617	0/0:18,0:18:51.17:0,51,851	0/0:28,0:28:75.20:0,75,1202	0/0:9,0:10:29.59:0,30,457	1/1:1,28:29:84.23:992,84,0	1/1:3,25:28:69.21:839,69,0	1/1:3,18:21:48.14:586,48,0	0/0:18,0:18:51.17:0,51,859	0/0:17,0:18:48.16:0,48,785	0/0:17,0:17:51.17:0,51,862	1/1:1,19:20:51.16:622,51,0	0/0:33,0:33:96.32:0,96,1599	1/1:1,18:19:36.11:439,36,0	0/0:3,0:3:9.03:0,9,149
chr10	105611749	.	C	CAT	10858.20	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-4.778;DP=703;FS=6.569;HRun=0;HaplotypeScore=81.9800;InbreedingCoeff=0.9993;MQ=79.89;MQ0=1;MQRankSum=-2.622;QD=50.04;ReadPosRankSum=-0.846;VQSLOD=5.2684;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.14:0,93,1398	1/1:0,11:11:21.07:426,21,0	0/0:23,0:24:68.61:0,69,992	0/0:18,0:18:51.17:0,51,793	0/0:27,0:26:69.24:0,69,1117	1/1:0,18:17:48.16:974,48,0	1/1:0,18:19:42.14:853,42,0	1/1:0,35:36:99:1921,108,0	0/0:21,0:21:63.14:0,63,942	0/0:35,0:35:99:0,105,1658	0/0:31,0:31:90.14:0,90,1372	0/0:19,0:19:57.13:0,57,873	0/0:28,0:28:84.15:0,84,1233	0/0:19,0:19:57.14:0,57,851	0/0:28,0:28:84.22:0,84,1268	0/0:30,0:30:90.26:0,90,1408	0/0:48,0:48:99:0,144,2282	0/0:15,0:15:45.15:0,45,731	1/1:0,23:23:69.21:1284,69,0	1/1:0,23:24:63.22:1267,63,0	1/1:0,14:17:39.13:792,39,0	0/0:27,0:27:75.05:0,75,1077	0/0:22,0:22:63.17:0,63,993	0/0:25,0:25:58.39:0,58,972	1/1:0,32:33:78.27:1578,78,0	0/0:25,0:25:75.26:0,75,1213	1/1:0,34:36:87.11:1765,87,0	0/0:11,0:11:33.11:0,33,536
chr10	105612100	.	TGG	T	1415.78	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=8.384;DP=497;FS=0.967;HRun=4;HaplotypeScore=105.8256;InbreedingCoeff=0.9429;MQ=67.60;MQ0=12;MQRankSum=-6.277;QD=9.38;ReadPosRankSum=-1.294;VQSLOD=-0.4626;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:53.66:0,54,492	1/1:14,0:12:20.64:134,21,0	0/0:26,0:17:33.82:0,34,361	0/0:27,0:18:34.34:0,34,384	0/0:23,0:23:46.37:0,46,401	1/1:13,1:13:20.94:173,21,0	1/1:28,0:27:26.79:200,27,0	1/1:3,22:25:62.98:456,63,0	0/0:16,0:16:41.97:0,42,392	0/0:22,0:22:51.48:0,51,512	0/0:14,0:14:32.87:0,33,317	0/0:26,0:26:64.23:0,64,741	0/0:14,0:14:4.54:0,5,116	0/0:15,0:15:38.86:0,39,448	0/0:16,0:15:41.28:0,41,477	0/0:15,0:15:45.05:0,45,498	0/0:23,0:23:52.55:0,53,688	0/0:24,0:21:50.64:0,51,532	1/1:14,1:15:37.77:273,38,0	1/1:15,1:16:12:106,12,0	1/1:20,0:18:14.92:117,15,0	0/0:10,0:10:29.96:0,30,292	0/0:6,0:6:11.99:0,12,102	0/0:20,0:20:59.39:0,59,676	1/1:9,1:9:5.67:36,6,0	0/0:16,0:16:41.39:0,41,367	1/1:7,2:9:17.33:128,17,0	0/0:5,0:5:14.36:0,14,138
chr10	105612103	.	GGTGT	G	124.34	PASS	AB=0.963;AC=13;AF=0.283;AN=46;BaseQRankSum=3.307;DP=517;FS=2.455;HRun=0;HaplotypeScore=126.7652;InbreedingCoeff=0.0011;MQ=64.24;MQ0=20;MQRankSum=-0.020;QD=0.70;ReadPosRankSum=0.756;VQSLOD=2.6717;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:17.99:0,18,230	0/0:14,0:12:2.96:0,3,19	./.	./.	0/1:19,4:24:28.82:29,0,194	1/1:15,0:13:2.60:26,3,0	0/0:28,0:27:3.44:0,3,21	./.	0/0:18,0:17:5.91:0,6,73	0/1:23,0:21:11.70:12,0,235	0/0:16,0:16:12.04:0,12,213	0/0:27,0:27:12.07:0,12,370	0/0:14,0:13:12.23:0,12,101	0/1:19,0:19:20.68:21,0,326	0/0:18,0:16:15.88:0,16,293	0/0:18,0:18:21.07:0,21,460	0/0:22,0:23:30.29:0,30,542	0/1:23,1:22:31.63:32,0,217	0/1:14,0:14:12.47:12,0,49	1/1:16,0:16:3:27,3,0	./.	0/0:10,0:10:9.02:0,9,129	./.	0/1:22,1:23:49.54:50,0,412	1/1:11,0:9:2.22:7,2,0	0/0:18,0:18:20.81:0,21,264	0/1:7,0:7:16.91:43,0,17	0/0:5,0:5:3.01:0,3,71
chr10	105612123	.	T	TGCGCGAGC	2185.76	PASS	AB=0.880;AC=10;AF=0.185;AN=54;BaseQRankSum=9.239;DP=483;FS=6.289;HRun=0;HaplotypeScore=163.1540;InbreedingCoeff=0.2011;MQ=47.39;MQ0=26;MQRankSum=-8.132;QD=20.43;ReadPosRankSum=0.906;VQSLOD=2.2202;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:55.11:0,55,1451	0/1:13,0:11:21.69:176,0,22	0/0:6,0:2:6.02:0,6,127	0/0:15,0:8:21.07:0,21,493	0/0:25,0:25:36.12:0,36,960	0/1:12,0:13:99:145,0,142	0/1:20,0:17:24.98:98,0,25	1/1:7,0:7:18.02:286,18,0	0/0:15,0:14:24.08:0,24,565	0/0:25,0:23:69.23:0,69,1819	0/0:9,0:9:18.53:0,19,506	0/0:26,0:26:66.20:0,66,1650	0/0:18,0:17:22.85:0,23,597	0/0:20,0:20:39.13:0,39,1055	0/0:23,0:21:48.90:0,49,1308	0/0:15,0:15:36.12:0,36,1001	0/0:28,0:28:69.23:0,69,1815	0/0:27,0:23:61.22:0,61,1706	0/1:9,11:18:91.64:1007,0,92	1/1:9,4:12:6.02:89,6,0	./.	0/0:6,0:5:15.05:0,15,381	0/0:8,0:8:9.01:0,9,185	0/0:28,0:27:63.18:0,63,1614	0/1:11,0:10:59.97:102,0,60	0/0:25,0:25:70.79:0,71,1912	0/1:6,2:8:15.42:432,0,15	0/0:5,0:5:9.03:0,9,258
chr10	105612153	.	TGTGTGTGTGCGCGC	T	895.14	PASS	AB=0.969;AC=12;AF=0.222;AN=54;BaseQRankSum=7.729;DP=490;FS=0.000;HRun=0;HaplotypeScore=190.7835;InbreedingCoeff=0.6055;MQ=49.45;MQ0=16;MQRankSum=-6.970;QD=8.29;ReadPosRankSum=-1.519;VQSLOD=2.3001;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:54.47:0,54,2541	./.	0/0:12,0:3:9.03:0,9,171	0/0:18,0:6:14.36:0,14,191	0/0:18,0:18:36.09:0,36,1318	1/1:19,0:17:12.21:158,12,0	1/1:24,0:22:1.35:3,1,0	0/1:19,0:19:21.11:21,0,346	0/0:12,0:12:15.05:0,15,676	0/0:15,0:15:42.07:0,42,1777	0/0:11,0:11:24.07:0,24,952	0/0:21,0:21:48.16:0,48,2040	0/0:21,0:21:36.12:0,36,1566	0/0:21,0:21:48.15:0,48,1853	0/0:22,0:21:54.17:0,54,2619	0/0:14,0:14:36.12:0,36,2034	0/0:28,0:28:69.22:0,69,2773	0/0:29,0:27:78.27:0,78,3457	0/1:14,1:12:99:275,0,114	1/1:9,1:9:5.05:115,5,0	0/0:35,0:32:1.12:0,1,4	0/0:6,0:5:15.05:0,15,335	0/0:9,0:9:15.05:0,15,549	0/0:26,0:25:57.16:0,57,2319	1/1:13,0:12:2.98:93,3,0	0/0:20,0:20:57.15:0,57,2515	1/1:6,2:8:19.55:379,20,0	0/0:7,0:7:18.06:0,18,616
chr10	105612564	.	T	TTA	7962.11	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-12.402;DP=624;FS=0.351;HRun=0;HaplotypeScore=75.3992;InbreedingCoeff=0.9793;MQ=76.54;MQ0=3;MQRankSum=-1.765;QD=44.23;ReadPosRankSum=-1.459;VQSLOD=5.9178;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,117,1709	1/1:1,7:7:18.06:345,18,0	0/0:29,0:28:74.60:0,75,1070	0/0:16,0:16:5.26:0,5,415	0/0:18,0:18:51.15:0,51,738	1/1:1,15:16:33.11:615,33,0	1/1:0,27:27:72.25:1388,72,0	1/1:2,24:26:72.23:1329,72,0	0/0:17,0:17:48.14:0,48,693	0/0:28,0:28:81.26:0,81,1198	0/0:11,0:11:33.08:0,33,478	0/0:23,0:23:66.18:0,66,965	0/0:19,0:19:54.07:0,54,748	0/0:35,0:35:99:0,102,1448	0/0:29,0:28:87.23:0,87,1263	0/0:39,0:39:99:0,111,1649	0/0:41,0:41:99:0,117,1673	0/0:13,0:13:39.09:0,39,548	1/1:3,15:18:45.14:825,45,0	1/1:2,12:14:27.09:493,27,0	1/1:1,27:29:57.20:1098,57,0	0/0:12,0:12:30.10:0,30,459	0/0:12,0:12:30.07:0,30,435	0/0:24,0:24:51.17:0,51,780	1/1:1,15:15:39.13:730,39,0	0/0:27,0:27:81.27:0,81,1232	1/1:1,25:25:60.21:1138,60,0	0/0:8,0:8:24.08:0,24,365
chr10	105617305	.	GGA	G	3723.44	PASS	AB=0.890;AC=20;AF=0.357;AN=56;BaseQRankSum=9.575;DP=611;FS=3.036;HRun=0;HaplotypeScore=77.4375;InbreedingCoeff=0.8224;MQ=71.84;MQ0=12;MQRankSum=-0.190;QD=18.07;ReadPosRankSum=0.469;VQSLOD=3.4860;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,2:31:43.72:0,44,1221	1/1:2,4:6:9.03:113,9,0	0/0:55,2:27:2.39:0,2,362	0/0:81,0:36:61.23:0,61,923	0/0:16,0:16:39.13:0,39,641	1/1:7,10:17:17.89:201,18,0	1/1:5,14:20:38.96:464,39,0	1/1:6,12:18:36.10:433,36,0	0/0:13,0:13:30.10:0,30,487	0/1:13,3:16:41.96:42,0,401	0/0:12,0:12:36.12:0,36,594	0/1:28,2:30:2.79:3,0,1001	0/0:12,0:12:27.09:0,27,416	0/0:18,2:20:13.84:0,14,695	0/0:19,0:19:45.15:0,45,731	0/0:18,0:18:45.15:0,45,731	0/0:27,0:27:69.24:0,69,1135	0/0:13,0:13:33.11:0,33,545	1/1:8,15:23:44.95:522,45,0	1/1:0,13:13:36.11:445,36,0	1/1:5,26:31:54.17:676,54,0	0/0:5,0:5:12.03:0,12,173	0/0:10,0:10:18.06:0,18,294	0/0:33,0:32:81.28:0,81,1325	1/1:3,10:13:27.09:338,27,0	0/0:29,0:29:75.26:0,75,1221	1/1:1,16:17:39.12:487,39,0	0/0:6,0:6:18.06:0,18,297
chr10	105618989	.	TTC	T	666.11	PASS	AB=0.903;AC=17;AF=0.327;AN=52;BaseQRankSum=3.338;DP=600;FS=2.181;HRun=0;HaplotypeScore=101.2375;InbreedingCoeff=-0.3304;MQ=62.92;MQ0=14;MQRankSum=-0.736;QD=1.94;ReadPosRankSum=1.739;VQSLOD=2.1278;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,1:32:40.83:41,0,363	0/0:8,0:8:11:0,11,49	./.	./.	0/1:19,0:19:3.33:3,0,203	0/0:19,0:19:5.91:0,6,41	0/1:23,4:26:15.48:87,0,15	0/0:24,0:23:5.91:0,6,31	0/1:17,3:19:68.56:69,0,259	0/1:18,2:20:38.48:38,0,273	0/1:16,0:16:7.74:8,0,203	0/0:11,0:16:17.63:0,18,195	0/0:25,0:24:27.04:0,27,351	0/1:14,2:16:41.84:42,0,221	0/1:24,3:27:62.75:63,0,344	0/1:17,7:24:99:153,0,359	0/1:21,0:23:12.18:39,0,12	1/1:11,0:17:13.67:66,14,0	0/1:21,0:21:40.82:41,0,56	0/0:22,0:22:3.52:0,4,141	0/0:25,0:24:32.96:0,33,162	0/1:17,1:19:80.31:80,0,133	0/1:14,2:16:52.97:53,0,218	0/1:19,3:22:26.80:27,0,400	0/0:17,0:17:5.99:0,6,50	0/1:20,2:21:9.04:9,0,229	0/0:38,0:38:29.13:0,29,281	0/0:17,0:16:10.59:0,11,139
chr10	105618991	.	C	CTCTCTCTCTCTCAT	3405.68	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=-3.105;DP=633;FS=9.430;HRun=0;HaplotypeScore=243.5858;InbreedingCoeff=0.3106;MQ=59.60;MQ0=17;MQRankSum=0.029;QD=14.68;ReadPosRankSum=-3.145;VQSLOD=0.8190;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:38:84.20:0,84,1702	0/1:8,0:8:76.91:77,0,219	0/0:19,0:12:8.43:0,8,181	0/0:28,0:11:2.44:0,2,217	0/0:20,0:20:39.06:0,39,694	1/1:7,11:24:8.03:271,8,0	1/1:26,0:26:23.55:957,24,0	1/1:24,0:23:14.53:614,15,0	0/0:20,0:19:12.19:0,12,843	0/0:22,0:22:45.12:0,45,950	0/0:17,0:17:23.82:0,24,621	0/0:16,0:16:39.10:0,39,667	0/0:26,0:25:53.89:0,54,960	0/0:17,0:17:39.05:0,39,840	0/0:26,0:26:69.10:0,69,1521	0/0:26,0:26:51.97:0,52,1667	0/1:24,0:23:42.38:42,0,907	0/0:16,0:16:37.67:0,38,745	0/1:21,0:21:99:215,0,469	0/1:22,0:22:99:265,0,698	0/1:24,0:24:99:234,0,511	0/0:22,0:21:40.33:0,40,997	0/0:17,0:16:33.10:0,33,887	0/0:23,0:23:47.71:0,48,1099	1/1:18,0:18:0.38:279,0,0	0/0:29,0:28:56.17:0,56,1032	0/1:39,0:39:99:452,0,1003	0/0:17,0:16:34.36:0,34,677
chr10	105618993	.	C	CTCTCTCTCTCAT	2905.93	PASS	AB=0.992;AC=11;AF=0.196;AN=56;BaseQRankSum=-3.226;DP=656;FS=5.281;HRun=0;HaplotypeScore=225.5483;InbreedingCoeff=-0.1065;MQ=58.34;MQ0=20;MQRankSum=-2.438;QD=12.26;ReadPosRankSum=-2.641;VQSLOD=1.7691;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:40:99:0,99,1906	0/1:8,0:8:76.91:77,0,194	0/0:21,0:12:10.12:0,10,185	0/0:29,0:10:2.59:0,3,217	0/0:20,0:20:42.05:0,42,787	0/1:24,0:24:13.26:228,0,13	0/1:25,0:26:12.80:649,0,13	0/1:24,0:22:23.46:597,0,23	0/0:21,0:20:47.90:0,48,959	0/0:23,0:23:54.13:0,54,1069	0/0:17,0:17:24.07:0,24,586	0/0:17,0:17:39.12:0,39,648	0/0:26,0:25:54.01:0,54,1024	0/0:19,0:19:42.07:0,42,928	0/0:27,0:26:69.22:0,69,1537	0/0:27,0:27:63.69:0,64,1650	0/1:23,0:22:31.16:31,0,834	0/0:17,0:17:37.68:0,38,722	0/1:21,0:21:99:212,0,409	0/1:23,0:23:99:265,0,634	0/1:26,0:25:99:230,0,544	0/0:23,0:22:40.13:0,40,932	0/0:19,0:18:33.10:0,33,844	0/0:23,0:23:51.17:0,51,1237	1/1:7,10:22:0.38:326,0,0	0/0:30,0:29:74.33:0,74,1296	0/1:39,0:39:99:435,0,914	0/0:17,0:16:34.37:0,34,697
chr10	105619003	.	C	CAT	3475.63	PASS	AB=0.957;AC=15;AF=0.268;AN=56;BaseQRankSum=5.252;DP=658;FS=5.976;HRun=0;HaplotypeScore=105.1873;InbreedingCoeff=0.6883;MQ=53.18;MQ0=25;MQRankSum=0.195;QD=17.04;ReadPosRankSum=0.044;VQSLOD=3.1447;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:44:99:0,120,1767	1/1:8,0:8:20.19:165,20,0	0/0:22,0:8:21:0,21,260	0/0:38,0:9:0.65:0,1,257	0/0:17,0:17:42.10:0,42,592	0/1:20,0:20:48.36:48,0,126	0/1:23,4:26:99:411,0,205	1/1:22,0:20:23.62:654,24,0	0/0:23,0:22:57.15:0,57,825	0/0:21,0:21:60.15:0,60,884	0/0:18,0:18:27.01:0,27,392	0/0:18,0:18:44.62:0,45,555	0/0:22,0:21:53.86:0,54,820	0/0:20,0:20:57.11:0,57,814	0/0:27,0:26:75.20:0,75,1089	0/0:25,0:25:66.14:0,66,898	0/0:27,0:26:63.05:0,63,816	0/0:17,0:17:45.58:0,46,495	1/1:16,0:18:29.08:446,29,0	1/1:22,0:23:58.55:516,59,0	1/1:24,0:23:37.40:445,37,0	0/0:24,0:23:48.26:0,48,705	0/0:16,0:15:36.06:0,36,475	0/0:25,0:25:57.17:0,57,856	0/1:21,0:21:32.10:82,0,32	0/0:30,0:29:84.27:0,84,1264	1/1:39,0:40:37.87:708,38,0	0/0:18,0:17:46.95:0,47,679
chr10	105619176	.	AAT	A	10284.88	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=16.050;DP=747;FS=2.452;HRun=0;HaplotypeScore=85.5247;InbreedingCoeff=0.9998;MQ=84.80;MQ0=0;MQRankSum=-5.106;QD=43.95;ReadPosRankSum=0.433;VQSLOD=6.2926;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,2697	1/1:0,14:14:42.14:685,42,0	0/0:29,0:29:87.30:0,87,1676	0/0:18,0:17:48.13:0,48,919	0/0:33,0:33:99:0,99,1960	1/1:0,24:24:60.20:978,60,0	1/1:0,20:20:60.20:979,60,0	1/1:0,31:31:90.27:1394,90,0	0/0:28,0:28:78.26:0,78,1537	0/0:28,0:29:87.30:0,87,1752	0/0:16,0:16:48.15:0,48,927	0/0:24,0:24:72.25:0,72,1439	0/0:24,0:24:69.24:0,69,1390	0/0:28,0:28:84.29:0,84,1665	0/0:33,0:33:99:0,99,1990	0/0:39,0:39:99:0,117,2307	0/0:23,0:23:69.24:0,69,1388	0/0:10,0:10:30.10:0,30,591	1/1:0,28:28:84.24:1263,84,0	1/1:0,38:38:99:1662,102,0	1/1:0,35:35:93.32:1517,93,0	0/0:41,0:41:99:0,123,2381	0/0:22,0:22:66.21:0,66,1305	0/0:25,0:25:75.23:0,75,1441	1/1:0,14:14:33.11:538,33,0	0/0:33,0:33:99:0,99,2004	1/1:0,30:30:78.27:1269,78,0	0/0:11,0:11:33.11:0,33,670
chr10	105622295	.	TG	T	2075.38	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.146;DP=740;FS=0.000;HRun=1;HaplotypeScore=70.0121;InbreedingCoeff=0.9943;MQ=87.84;MQ0=0;MQRankSum=-0.724;QD=33.47;ReadPosRankSum=0.776;VQSLOD=3.2613;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,153,2307	0/0:5,0:5:15.05:0,15,240	0/0:32,0:32:78.21:0,78,1245	0/0:20,0:20:57.19:0,57,862	0/0:36,0:36:99:0,108,1690	1/1:0,24:24:60.20:839,60,0	1/1:0,21:21:57.19:792,57,0	0/0:34,0:34:99:0,99,1517	0/0:23,0:23:69.24:0,69,1099	0/0:34,0:34:99:0,102,1575	0/0:26,0:26:78.24:0,78,1219	0/0:24,0:24:69.23:0,69,1103	0/0:19,0:19:57.19:0,57,908	0/0:20,0:20:60.20:0,60,956	0/0:37,0:37:99:0,111,1749	0/0:25,0:25:75.24:0,75,1172	0/0:36,0:36:99:0,108,1719	0/0:19,0:19:57.19:0,57,910	0/0:20,0:20:57.19:0,57,882	0/0:23,0:23:69.22:0,69,1078	0/0:32,0:32:96.25:0,96,1457	0/0:31,0:31:87.30:0,87,1381	0/0:23,0:23:69.22:0,69,1078	0/0:39,0:39:99:0,117,1861	1/1:0,17:17:42.14:587,42,0	0/0:25,0:25:75.25:0,75,1179	0/0:33,0:33:96.31:0,96,1508	0/0:11,0:11:33.11:0,33,527
chr10	105622858	.	T	TAA	1990.05	PASS	AB=0.786;AC=13;AF=0.232;AN=56;BaseQRankSum=5.272;DP=562;FS=7.119;HRun=14;HaplotypeScore=87.8882;InbreedingCoeff=0.6166;MQ=66.08;MQ0=12;MQRankSum=-0.735;QD=10.82;ReadPosRankSum=-2.722;VQSLOD=1.8329;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:30,1:31:6.83:7,0,460	0/1:2,1:8:9.47:58,0,9	0/0:53,0:20:8.46:0,8,64	0/0:44,0:16:9.02:0,9,87	0/0:19,0:26:46.24:0,46,400	0/0:11,0:11:5.59:0,6,20	0/0:9,0:9:3.13:0,3,20	1/1:12,20:37:72.44:757,72,0	0/0:15,0:15:38.92:0,39,319	0/0:27,0:25:21.50:0,22,403	0/1:12,0:18:16.54:17,0,231	0/0:14,0:14:26.85:0,27,219	0/0:9,0:11:18.69:0,19,160	0/0:13,0:13:32.91:0,33,276	0/0:16,0:17:18.49:0,18,261	0/0:19,0:20:23.36:0,23,232	0/0:14,0:14:32.28:0,32,254	0/0:21,0:21:45.36:0,45,375	1/1:34,0:32:58.60:461,59,0	1/1:18,1:18:38.80:311,39,0	1/1:10,0:10:17.96:152,18,0	0/0:6,0:6:14.97:0,15,125	0/0:15,0:18:33.48:0,33,257	0/0:11,0:12:29.67:0,30,237	0/0:8,0:8:0.38:0,0,25	0/0:25,0:30:42.51:0,43,401	1/1:27,0:25:46.54:406,47,0	0/0:6,0:6:14.92:0,15,120
chr10	105622868	.	A	AAC	2682.19	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-4.928;DP=582;FS=1.414;HRun=0;HaplotypeScore=89.9845;InbreedingCoeff=0.8434;MQ=71.23;MQ0=13;MQRankSum=1.568;QD=20.63;ReadPosRankSum=0.520;VQSLOD=3.5905;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:73.19:0,73,1103	0/0:8,0:8:7.86:0,8,113	0/0:59,0:20:26.70:0,27,205	0/0:58,0:23:23.44:0,23,253	0/0:27,0:27:74.88:0,75,834	0/0:12,0:12:20.98:0,21,186	0/0:9,0:9:26.74:0,27,209	0/1:37,0:37:99:122,0,202	0/0:14,0:14:39.13:0,39,533	0/0:27,0:25:72:0,72,899	0/0:17,0:17:30.32:0,30,485	0/0:14,0:14:38.99:0,39,463	0/0:10,0:10:29.92:0,30,337	0/0:15,0:15:45.08:0,45,550	0/0:16,0:16:43.96:0,44,500	0/0:16,0:15:38.68:0,39,460	0/0:14,0:14:36.11:0,36,471	0/0:18,0:18:54.11:0,54,687	1/1:4,31:34:86.48:1121,86,0	1/1:1,17:18:47.88:600,48,0	1/1:0,8:9:18.05:265,18,0	0/0:6,0:6:18.05:0,18,231	0/0:17,0:17:45.01:0,45,524	0/0:12,0:12:36.08:0,36,444	0/0:9,0:9:26.78:0,27,233	0/0:30,0:30:80.71:0,81,899	1/1:3,23:27:56.99:739,57,0	0/0:8,0:8:21.04:0,21,254
chr10	105622875	.	AAAC	A	681.14	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.519;DP=562;FS=1.546;HRun=0;HaplotypeScore=101.5237;InbreedingCoeff=0.9794;MQ=66.68;MQ0=12;MQRankSum=-5.109;QD=20.03;ReadPosRankSum=-2.696;VQSLOD=2.7731;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:90.27:0,90,1805	0/0:8,0:8:18.05:0,18,343	0/0:51,0:15:23.53:0,24,272	0/0:48,0:18:40.89:0,41,474	0/0:27,0:27:69:0,69,1373	1/1:10,0:10:18.03:205,18,0	1/1:11,3:14:31.58:299,32,0	0/0:38,0:38:44.80:0,45,1696	0/0:14,0:14:39.09:0,39,739	0/0:26,0:24:65.99:0,66,1419	0/0:20,0:20:49.84:0,50,1009	0/0:12,0:12:36.12:0,36,782	0/0:9,0:9:26.76:0,27,498	0/0:16,0:16:48.16:0,48,933	0/0:16,0:16:38.26:0,38,749	0/0:14,0:13:36.10:0,36,773	0/0:14,0:14:33.09:0,33,717	0/0:19,0:19:51.14:0,51,1094	0/0:34,0:33:96.11:0,96,1922	0/0:14,0:13:33.09:0,33,694	0/0:9,0:9:24.04:0,24,460	0/0:5,0:5:12.04:0,12,209	0/0:18,0:18:44.84:0,45,737	0/0:13,0:13:39.09:0,39,756	1/1:7,3:10:29.90:319,30,0	0/0:30,0:30:84.24:0,84,1658	0/0:30,0:28:64.07:0,64,1323	0/0:7,0:7:21.07:0,21,463
chr10	105622876	.	AAC	A	558.60	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.899;DP=558;FS=0.000;HRun=0;HaplotypeScore=92.2000;InbreedingCoeff=0.9800;MQ=67.02;MQ0=11;MQRankSum=-5.555;QD=16.93;ReadPosRankSum=-2.858;VQSLOD=3.1165;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:89.49:0,89,1502	0/0:8,0:8:17.91:0,18,272	0/0:50,0:16:25.47:0,25,274	0/0:48,0:18:27.87:0,28,382	0/0:27,0:27:61.71:0,62,1095	1/1:5,4:9:18.87:156,19,0	1/1:13,1:14:34.65:299,35,0	0/0:38,0:38:45.07:0,45,1409	0/0:14,0:14:39.09:0,39,635	0/0:26,0:24:65.94:0,66,1173	0/0:21,0:21:51.56:0,52,834	0/0:12,0:12:36.12:0,36,638	0/0:10,0:10:24.85:0,25,437	0/0:16,0:16:48.13:0,48,782	0/0:15,0:15:37.83:0,38,620	0/0:14,0:13:36.06:0,36,639	0/0:15,0:15:36.08:0,36,615	0/0:18,0:18:51:0,51,888	0/0:33,0:32:93.77:0,94,1614	0/0:14,0:13:33.10:0,33,574	0/0:10,0:10:27.01:0,27,409	0/0:5,0:5:12.01:0,12,157	0/0:18,0:18:44.07:0,44,596	0/0:14,0:14:42.08:0,42,662	1/1:8,2:10:29.83:246,30,0	0/0:30,0:30:84.23:0,84,1390	0/0:29,0:27:63.68:0,64,1127	0/0:7,0:7:21.07:0,21,382
chr10	105622877	.	AC	A	594.97	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=6.544;DP=545;FS=2.009;HRun=1;HaplotypeScore=80.1857;InbreedingCoeff=0.8656;MQ=67.40;MQ0=11;MQRankSum=-4.790;QD=13.22;ReadPosRankSum=-3.091;VQSLOD=1.6159;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:89.87:0,90,1180	0/0:6,0:6:15.92:0,16,200	0/0:47,1:16:14.80:0,15,212	0/0:44,2:18:21.25:0,21,311	0/0:25,0:25:35.56:0,36,811	1/1:9,0:9:20.71:163,21,0	1/1:13,2:15:40.09:311,40,0	0/0:35,0:35:72.10:0,72,1159	0/0:14,0:14:32.02:0,32,486	0/0:25,0:23:66.21:0,66,921	0/0:19,0:19:52.27:0,52,673	0/0:13,0:13:39.11:0,39,529	0/1:10,0:10:2.81:3,0,321	0/0:16,0:16:48.02:0,48,630	0/0:15,0:15:37.94:0,38,500	0/0:15,0:14:36.08:0,36,514	0/0:14,0:14:36.10:0,36,492	0/0:17,0:17:50.96:0,51,710	0/0:33,0:32:93.29:0,93,1307	0/0:14,0:13:33.08:0,33,458	0/0:10,0:10:27:0,27,344	0/0:4,0:4:12.01:0,12,133	0/0:17,0:17:43.97:0,44,489	0/0:14,0:14:42.07:0,42,549	1/1:10,1:11:32.81:261,33,0	0/0:31,0:31:87.09:0,87,1104	0/0:29,0:27:64.09:0,64,904	0/0:7,0:7:21.07:0,21,304
chr10	105623720	.	AC	A	1298.16	PASS	AB=0.933;AC=10;AF=0.179;AN=56;BaseQRankSum=5.450;DP=479;FS=7.553;HRun=10;HaplotypeScore=58.4839;InbreedingCoeff=0.6422;MQ=84.41;MQ0=0;MQRankSum=-0.033;QD=9.69;ReadPosRankSum=-1.052;VQSLOD=1.7840;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,2:35:42.87:0,43,636	0/0:0,0:3:2.84:0,3,14	0/0:24,0:25:30.16:0,30,224	0/1:23,2:17:15.38:15,0,119	0/0:11,0:11:24.03:0,24,247	1/1:1,15:16:44.95:384,45,0	1/1:8,10:18:2.88:250,3,0	1/1:9,17:26:47.90:403,48,0	0/0:11,2:13:7.04:0,7,306	0/0:14,0:14:30.08:0,30,330	0/0:4,0:4:6.02:0,6,66	0/0:21,1:22:34.51:0,35,567	0/0:16,0:16:48.10:0,48,512	0/0:19,1:20:22.02:0,22,470	0/0:23,0:23:66.15:0,66,712	0/0:16,0:16:42.11:0,42,465	0/0:19,1:20:22.08:0,22,469	0/0:21,0:21:42.11:0,42,465	0/0:17,1:19:18.90:0,19,419	0/0:12,1:13:7.01:0,7,287	0/0:17,0:17:33.07:0,33,355	0/0:11,0:12:32.92:0,33,346	0/0:7,0:7:18.05:0,18,199	0/0:12,0:12:24.06:0,24,266	1/1:2,15:18:47.02:397,47,0	0/1:29,2:31:5.61:6,0,609	0/0:11,0:11:30.08:0,30,331	0/0:10,0:10:18.05:0,18,199
chr10	105624398	.	ATG	A	573.47	PASS	AB=0.921;AC=22;AF=0.423;AN=52;BaseQRankSum=5.788;DP=597;FS=3.098;HRun=0;HaplotypeScore=83.4884;InbreedingCoeff=0.1553;MQ=62.11;MQ0=6;MQRankSum=-0.686;QD=1.73;ReadPosRankSum=1.504;VQSLOD=1.0359;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:14.89:0,15,150	1/1:11,0:11:2.84:14,3,0	./.	./.	0/0:26,0:26:23.04:0,23,291	1/1:19,0:27:11.83:57,12,0	1/1:10,0:19:5.68:28,6,0	0/0:27,0:27:6.80:0,7,41	0/1:18,2:20:34.96:35,0,261	0/0:18,0:17:18.41:0,18,180	0/1:17,2:20:19.54:20,0,242	0/0:26,0:25:15.62:0,16,488	0/1:11,3:14:20.50:21,0,122	0/0:14,0:14:14.98:0,15,157	0/1:28,0:28:3.77:4,0,307	0/1:18,3:21:5.42:5,0,318	0/0:29,1:33:12.60:0,13,531	0/0:22,0:21:45.91:0,46,557	0/1:24,0:25:58.04:58,0,138	1/1:16,8:25:11.73:111,12,0	0/1:25,2:26:14.51:15,0,138	0/0:21,0:22:8.72:0,9,237	0/1:17,1:18:2.42:2,0,349	0/1:23,3:26:35.10:35,0,246	1/1:11,0:15:13.96:66,14,0	0/0:23,0:23:2.18:0,2,186	1/1:12,13:26:26.04:252,26,0	0/1:9,0:9:20.47:20,0,71
chr10	105624436	.	GTGTGTGTA	G	69.17	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=6.543;DP=613;FS=8.772;HRun=0;HaplotypeScore=151.9349;InbreedingCoeff=0.2509;MQ=56.58;MQ0=14;MQRankSum=-4.121;QD=1.50;ReadPosRankSum=-0.945;VQSLOD=2.0708;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:52.57:0,53,1165	1/1:0,8:8:2.81:85,3,0	0/0:21,0:3:8.98:0,9,79	0/0:23,0:7:0.49:0,0,96	0/0:23,0:23:60.08:0,60,1619	0/1:17,0:17:49.10:49,0,98	0/0:20,0:20:18.52:0,19,182	0/0:25,0:24:46.96:0,47,1062	0/0:22,0:22:43.11:0,43,1325	0/0:29,0:28:78.04:0,78,1729	0/0:15,0:15:36.09:0,36,1162	0/0:28,0:27:72.14:0,72,2034	0/0:18,0:18:36.93:0,37,915	0/0:11,0:11:21.07:0,21,820	0/0:17,0:17:48.14:0,48,1532	0/0:19,0:19:44.83:0,45,1318	0/0:33,0:33:67.40:0,67,2097	0/0:31,0:30:82.81:0,83,2172	0/0:18,0:18:45.09:0,45,963	0/0:33,0:33:71.39:0,71,1002	0/0:25,0:24:53.95:0,54,1127	0/0:18,0:18:45.08:0,45,1181	0/0:23,0:23:63.12:0,63,1649	0/0:25,0:24:57.09:0,57,1492	0/1:21,0:21:37.56:38,0,243	0/0:21,0:21:63.16:0,63,1606	0/0:29,0:29:66.94:0,67,1018	0/0:13,0:13:38.98:0,39,677
chr10	105626068	.	G	GC	5526.55	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=6.042;DP=501;FS=1.905;HRun=2;HaplotypeScore=230.1950;InbreedingCoeff=0.4417;MQ=65.13;MQ0=4;MQRankSum=-5.147;QD=11.30;ReadPosRankSum=2.356;VQSLOD=3.6523;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,1:32:60.80:333,61,0	1/1:9,0:9:22.87:119,23,0	0/1:15,0:15:8.34:8,0,43	0/0:12,0:12:1.83:0,2,45	1/1:28,0:28:45.99:200,46,0	1/1:13,0:13:31.73:172,32,0	1/1:15,1:16:40.24:215,40,0	1/1:12,0:12:26.68:178,27,0	1/1:11,0:11:31.13:160,31,0	1/1:31,0:31:61.56:412,62,0	1/1:22,0:22:47.42:211,47,0	1/1:16,0:16:39.73:203,40,0	1/1:17,4:18:36.81:183,37,0	1/1:17,0:17:43.46:242,43,0	1/1:23,0:23:54.16:285,54,0	1/1:30,1:30:73.98:389,74,0	1/1:10,1:10:20.47:121,20,0	1/1:7,0:7:20.73:139,21,0	1/1:12,0:12:21.78:177,22,0	1/1:27,0:27:59.96:283,60,0	1/1:12,1:13:20.42:134,20,0	1/1:23,0:23:33.49:180,33,0	1/1:20,0:20:42.21:207,42,0	1/1:11,0:11:19.83:108,20,0	1/1:28,0:28:73.68:368,74,0	1/1:17,0:17:37.90:219,38,0	1/1:20,1:21:46.24:263,46,0	1/1:1,0:1:2.94:18,3,0
chr10	105626075	.	A	AAC	10207.52	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=6.618;DP=413;FS=1.885;HRun=0;HaplotypeScore=205.3951;InbreedingCoeff=0.5781;MQ=76.09;MQ0=4;MQRankSum=-7.447;QD=25.65;ReadPosRankSum=4.475;VQSLOD=5.7050;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:22:57.09:550,57,0	1/1:0,8:8:24.03:229,24,0	0/1:13,0:16:12.99:13,0,147	0/0:12,0:14:31.35:0,31,185	1/1:0,21:21:50.98:445,51,0	1/1:0,11:11:33.05:319,33,0	1/1:0,14:14:39.01:354,39,0	1/1:2,8:10:26.82:304,27,0	1/1:0,11:11:33.03:306,33,0	1/1:0,25:26:44.39:802,44,0	1/1:0,21:21:59.98:514,60,0	1/1:0,14:14:42.02:384,42,0	1/1:1,14:13:39.04:360,39,0	1/1:0,14:14:42.03:381,42,0	1/1:0,18:18:54.06:503,54,0	1/1:1,25:25:75.11:712,75,0	1/1:1,5:5:15.02:145,15,0	1/1:1,7:8:20.85:207,21,0	1/1:1,5:6:16.86:193,17,0	1/1:1,20:22:66:594,66,0	1/1:1,6:7:18:161,18,0	1/1:0,16:16:47.99:418,48,0	1/1:0,17:17:50.37:426,50,0	1/1:0,10:10:23.94:213,24,0	1/1:0,26:26:78.06:722,78,0	1/1:0,13:13:39.10:430,39,0	1/1:1,14:16:48:489,48,0	1/1:0,1:1:3.01:32,3,0
chr10	105627901	.	CCTTTCTCTCTTT	C	1183.18	PASS	AB=0.938;AC=4;AF=0.071;AN=56;BaseQRankSum=-0.118;DP=612;FS=2.866;HRun=0;HaplotypeScore=272.9176;InbreedingCoeff=0.4387;MQ=43.96;MQ0=9;MQRankSum=-3.523;QD=24.15;ReadPosRankSum=-0.814;VQSLOD=2.3220;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:56.94:0,57,2254	0/0:10,0:10:21.06:0,21,712	0/0:22,0:10:19.46:0,19,482	0/0:38,0:12:21.07:0,21,517	0/0:28,0:28:77.97:0,78,2939	1/1:12,2:13:21.07:423,21,0	0/1:14,0:13:55.80:259,0,56	0/0:26,0:26:65.67:0,66,2006	0/0:10,0:10:27.09:0,27,1066	0/0:35,0:33:99:0,99,4447	0/0:22,0:22:59.01:0,59,2044	0/0:22,0:22:62.98:0,63,2333	0/0:21,0:21:57.06:0,57,2473	0/0:24,0:23:62.89:0,63,2350	0/0:21,0:21:56.85:0,57,1828	0/0:34,0:34:90.08:0,90,3393	0/0:22,0:22:66.16:0,66,2591	0/0:12,0:12:33.08:0,33,1737	0/0:19,0:17:50.29:0,50,1591	0/0:39,0:35:88.07:0,88,3417	0/0:5,0:5:9.03:0,9,452	0/0:24,0:24:64.42:0,64,2372	0/0:27,0:27:72.09:0,72,3078	0/0:15,0:15:37.15:0,37,1643	0/1:18,3:21:99:616,0,258	0/0:26,0:26:72.21:0,72,2997	0/0:23,0:22:33.58:0,34,1453	0/0:17,0:17:38.26:0,38,2137
chr10	105627918	.	CTTCCTT	C	932.34	PASS	AB=0.992;AC=16;AF=0.286;AN=56;BaseQRankSum=11.631;DP=575;FS=9.280;HRun=0;HaplotypeScore=192.5587;InbreedingCoeff=-0.2430;MQ=41.06;MQ0=11;MQRankSum=-9.045;QD=2.71;ReadPosRankSum=-1.459;VQSLOD=1.8155;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:3.42:0,3,1288	0/0:11,0:11:12.04:0,12,253	0/0:17,0:4:9.03:0,9,271	0/0:33,0:9:15.05:0,15,262	0/1:26,0:26:55.73:56,0,1592	1/1:14,1:14:7.46:119,7,0	0/1:9,0:8:29.09:68,0,29	0/0:21,0:17:31.97:0,32,877	0/0:10,0:10:30.07:0,30,745	0/1:33,0:31:21.48:21,0,2438	0/1:20,0:20:21.88:22,0,1125	0/1:21,0:21:26.99:27,0,1388	0/1:21,0:21:58.31:58,0,1369	0/1:24,0:23:70.62:71,0,1182	0/1:21,0:21:99:111,0,934	0/1:30,0:30:11.58:12,0,1880	0/0:17,0:17:45.13:0,45,1297	0/0:12,0:12:31.87:0,32,1079	0/0:20,0:19:44.94:0,45,731	0/1:41,0:37:99:106,0,1221	0/0:5,0:5:9.01:0,9,181	0/1:22,0:22:3.23:3,0,1059	0/0:25,0:25:20.53:0,21,1799	0/1:14,0:14:3.91:4,0,778	0/1:21,3:24:74.89:386,0,75	0/1:23,0:23:25.53:26,0,1468	0/0:26,0:25:29.85:0,30,702	0/0:15,0:14:39.13:0,39,1116
chr10	105627924	.	T	TTC	4040.68	PASS	AB=1.000;AC=33;AF=0.611;AN=54;BaseQRankSum=10.265;DP=536;FS=0.000;HRun=0;HaplotypeScore=148.0355;InbreedingCoeff=-0.2166;MQ=40.32;MQ0=11;MQRankSum=-3.762;QD=8.63;ReadPosRankSum=-0.165;VQSLOD=2.7742;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:30.91:31,0,292	1/1:11,0:11:9.03:132,9,0	0/0:14,0:3:6.02:0,6,75	./.	0/1:25,0:25:95.14:95,0,353	1/1:9,0:10:7.57:69,8,0	1/1:7,0:6:6:54,6,0	1/1:12,6:14:21.03:295,21,0	0/1:7,0:7:11.99:12,0,159	0/1:31,0:30:99:178,0,391	0/1:19,0:19:69.31:69,0,240	0/1:20,0:20:99:111,0,271	0/1:21,0:21:99:128,0,310	0/1:25,0:24:99:182,0,151	0/1:19,0:19:99:221,0,142	0/1:26,0:26:99:164,0,365	0/0:13,0:13:14.08:0,14,263	0/0:12,0:12:16.59:0,17,205	1/1:5,12:17:38.80:582,39,0	1/1:15,25:36:60.01:752,60,0	1/1:4,0:4:3.01:44,3,0	0/1:17,0:17:99:142,0,117	0/1:24,0:24:27.85:28,0,430	0/1:12,0:12:39.16:39,0,126	1/1:24,0:27:44.54:373,45,0	0/1:27,0:27:99:190,0,308	1/1:28,0:27:9.03:143,9,0	0/1:14,0:13:4.64:5,0,88
chr10	105627926	.	C	CTT	5132.03	PASS	AB=0.868;AC=26;AF=0.464;AN=56;BaseQRankSum=12.697;DP=536;FS=0.866;HRun=3;HaplotypeScore=152.7523;InbreedingCoeff=-0.4473;MQ=40.00;MQ0=11;MQRankSum=-6.614;QD=11.23;ReadPosRankSum=4.892;VQSLOD=1.6613;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:17:48.36:48,0,445	1/1:11,0:11:8.98:75,9,0	0/0:14,0:3:9.03:0,9,121	0/0:25,0:7:5.82:0,6,43	0/1:22,2:24:99:204,0,540	1/1:10,0:10:11.91:87,12,0	0/1:6,3:8:2.93:125,0,3	0/1:15,4:15:44.89:152,0,45	0/1:6,1:7:31.93:32,0,208	0/1:29,3:30:99:279,0,711	0/1:17,3:20:99:145,0,405	0/1:16,3:19:99:204,0,427	0/1:16,10:27:99:267,0,432	0/1:19,6:25:99:326,0,286	0/1:17,2:19:99:392,0,252	0/1:17,9:26:99:334,0,575	0/0:13,0:13:33.83:0,34,432	0/0:11,1:12:8.54:0,9,393	0/1:17,0:17:39.09:254,0,39	0/1:34,4:34:20.93:622,0,21	0/1:4,0:4:13.39:13,0,18	0/1:12,3:15:99:250,0,239	0/1:22,2:25:46.34:46,0,610	0/1:10,1:11:61.44:61,0,214	1/1:10,15:27:50.96:664,51,0	0/1:15,11:26:99:498,0,453	0/1:28,0:27:44.95:52,0,45	0/0:14,0:13:33.68:0,34,296
chr10	105627934	.	C	CTT	5792.04	PASS	AB=1.000;AC=33;AF=0.611;AN=54;BaseQRankSum=12.133;DP=467;FS=0.000;HRun=1;HaplotypeScore=120.6631;InbreedingCoeff=-0.4287;MQ=38.73;MQ0=9;MQRankSum=-3.832;QD=13.19;ReadPosRankSum=3.725;VQSLOD=1.8769;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:78.39:78,0,320	1/1:10,0:10:8.96:73,9,0	0/0:9,0:2:6.02:0,6,89	./.	0/1:21,0:21:99:212,0,421	1/1:3,9:12:10.81:131,11,0	1/1:7,0:6:11.95:135,12,0	0/1:14,0:10:0.94:177,0,1	0/1:6,0:6:31.95:32,0,158	0/1:29,0:28:99:377,0,401	0/1:15,0:15:99:171,0,241	0/1:18,0:18:99:217,0,324	0/1:24,0:24:99:269,0,314	0/1:23,0:22:99:363,0,175	0/1:17,0:17:99:398,0,187	0/1:25,0:25:99:341,0,461	0/1:12,0:12:1.27:1,0,306	0/1:12,0:12:2.63:3,0,216	1/1:15,0:15:35.49:345,35,0	1/1:36,0:32:59.92:695,60,0	1/1:3,0:3:2.96:19,3,0	0/1:11,0:11:99:262,0,132	0/1:22,0:22:71.50:71,0,490	0/1:9,0:9:97.37:97,0,139	1/1:26,0:26:48.09:687,48,0	0/1:24,0:24:99:551,0,368	0/1:29,0:28:33.94:55,0,34	0/1:6,0:5:30.25:30,0,69
chr10	105627936	.	CTT	C	1133.55	PASS	AB=0.969;AC=21;AF=0.389;AN=54;BaseQRankSum=7.007;DP=449;FS=4.478;HRun=3;HaplotypeScore=130.8171;InbreedingCoeff=-0.3349;MQ=38.35;MQ0=9;MQRankSum=-2.839;QD=3.39;ReadPosRankSum=1.683;VQSLOD=-0.0309;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:3.11:0,3,421	1/1:0,10:10:9.03:132,9,0	0/0:8,0:2:6.02:0,6,95	./.	0/1:21,0:21:29.78:30,0,505	0/1:12,0:12:3.50:3,0,25	0/1:7,0:6:16.78:17,0,17	0/1:14,0:10:7.96:191,0,8	0/0:6,0:6:17.93:0,18,282	0/1:27,0:26:25.40:25,0,797	0/1:15,0:15:19.32:19,0,419	0/1:17,0:17:7.86:8,0,424	0/1:24,0:24:1.37:1,0,562	0/1:22,0:21:30.56:31,0,351	0/1:16,0:16:70.41:70,0,248	0/0:24,0:24:7.27:0,7,611	0/0:12,0:12:33.92:0,34,467	0/0:10,0:10:19.85:0,20,318	0/1:15,0:15:99:132,0,251	0/1:34,1:31:13.25:385,0,13	1/1:0,3:3:3.01:44,3,0	0/1:10,0:10:27.60:28,0,226	0/0:22,0:22:26.29:0,26,690	0/1:9,0:9:11.33:11,0,210	0/1:26,0:26:66.88:74,0,67	0/1:24,0:24:44.67:45,0,441	0/1:0,27:26:17.11:38,0,17	0/0:6,0:5:14.54:0,15,217
chr10	105628305	.	AGCGCTTGCCTAGCAACCGCAAG	A	355.67	PASS	AB=0.864;AC=3;AF=0.056;AN=54;BaseQRankSum=3.420;DP=476;FS=12.052;HRun=0;HaplotypeScore=245.8637;InbreedingCoeff=-0.0610;MQ=46.73;MQ0=9;MQRankSum=-3.319;QD=9.61;ReadPosRankSum=1.235;VQSLOD=1.0804;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.23:0,66,5495	0/0:7,0:6:15.05:0,15,1574	./.	0/0:11,0:4:12.02:0,12,163	0/0:19,0:18:45.15:0,45,4189	0/0:18,1:18:45.15:0,45,4333	0/0:13,0:12:33.11:0,33,3149	0/0:22,0:17:48.16:0,48,3096	0/0:13,0:13:33.11:0,33,3003	0/0:15,0:15:19.13:0,19,2965	0/0:18,1:18:42.14:0,42,3651	0/0:15,0:15:42.14:0,42,4279	0/0:17,0:17:45.15:0,45,4300	0/0:14,0:14:33.11:0,33,3010	0/0:15,0:15:45.15:0,45,4625	0/0:22,0:22:60.16:0,60,5234	0/0:33,0:33:99:0,99,8957	0/0:22,0:22:41.96:0,42,5596	0/0:15,0:13:36.11:0,36,2932	0/0:26,1:26:60.21:0,60,5250	0/0:18,0:17:42.14:0,42,3736	0/0:23,0:22:60.13:0,60,4748	0/1:14,1:14:99:142,0,2885	0/0:14,0:14:42.14:0,42,3206	0/1:17,2:19:99:139,0,3391	0/0:20,0:20:57.20:0,57,5240	0/0:20,0:18:38.69:0,39,4003	0/1:2,1:3:99:175,0,619
chr10	105628360	.	GA	G	1360.58	PASS	AB=0.868;AC=13;AF=0.232;AN=56;BaseQRankSum=4.805;DP=548;FS=11.420;HRun=10;HaplotypeScore=87.2186;InbreedingCoeff=0.6268;MQ=63.35;MQ0=11;MQRankSum=0.915;QD=8.72;ReadPosRankSum=-1.714;VQSLOD=0.9870;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.21:0,78,861	1/1:0,3:4:9:78,9,0	0/1:33,0:16:14.92:15,0,229	0/1:26,0:11:32.44:32,0,49	0/0:22,0:22:38.55:0,39,386	0/0:15,0:14:29.29:0,29,303	0/0:20,1:20:25.09:0,25,505	1/1:3,13:16:4.84:259,5,0	0/0:21,0:21:45.12:0,45,494	0/0:17,0:20:46.88:0,47,445	0/0:17,1:19:16.86:0,17,328	0/0:18,0:18:48.11:0,48,510	0/0:13,0:13:33.09:0,33,365	0/0:16,1:17:2.17:0,2,240	0/0:18,0:19:50.93:0,51,527	0/0:14,0:14:36.08:0,36,388	0/0:24,0:24:55.50:0,55,673	0/0:22,0:22:57.05:0,57,601	1/1:1,14:15:38.83:334,39,0	0/1:6,17:24:17.24:271,0,17	1/1:2,10:11:20.99:182,21,0	0/0:15,0:15:31.28:0,31,311	0/0:19,0:22:21.54:0,22,387	0/0:12,0:14:32.92:0,33,346	0/0:21,0:23:55.70:0,56,546	0/0:31,0:32:88.85:0,89,899	1/1:2,22:23:41.89:364,42,0	0/0:9,0:9:24.01:0,24,251
chr10	105628625	.	CT	C	601.31	PASS	AB=0.928;AC=10;AF=0.179;AN=56;BaseQRankSum=3.664;DP=342;FS=0.000;HRun=11;HaplotypeScore=41.5215;InbreedingCoeff=0.4804;MQ=59.04;MQ0=4;MQRankSum=0.711;QD=7.07;ReadPosRankSum=0.495;VQSLOD=0.9150;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:33.03:0,33,338	0/0:2,0:7:14.27:0,14,72	0/1:15,1:15:5.15:5,0,117	0/1:4,0:3:3.92:4,0,24	0/1:7,1:8:6.58:7,0,142	1/1:4,12:16:23.91:200,24,0	1/1:0,6:7:20.02:154,20,0	0/0:13,1:14:11.42:0,11,312	0/0:9,0:8:21.05:0,21,223	0/0:18,0:18:42.04:0,42,433	0/0:17,0:15:39.03:0,39,401	0/0:8,0:8:24.06:0,24,256	0/0:9,0:9:27.07:0,27,288	0/0:14,1:16:4.55:0,5,277	0/0:17,0:15:44.95:0,45,461	0/0:15,0:15:42.10:0,42,445	0/0:16,0:15:33.08:0,33,351	0/0:10,1:11:5.43:0,5,263	0/0:17,0:17:44.92:0,45,452	0/0:14,0:13:36.09:0,36,384	0/0:7,0:7:18.05:0,18,192	0/0:6,0:6:18.05:0,18,192	0/0:13,0:13:30.04:0,30,307	0/0:3,0:3:6.02:0,6,64	1/1:1,16:18:46.98:375,47,0	0/1:12,2:15:7.39:7,0,307	0/0:14,1:13:14.44:0,14,352	0/0:8,1:9:2.38:0,2,219
chr10	105629127	.	AT	A	3027.17	PASS	AB=0.885;AC=20;AF=0.357;AN=56;BaseQRankSum=7.417;DP=540;FS=8.371;HRun=11;HaplotypeScore=62.4053;InbreedingCoeff=0.7877;MQ=66.78;MQ0=3;MQRankSum=-1.480;QD=14.21;ReadPosRankSum=-0.271;VQSLOD=3.3940;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:32:51.63:0,52,731	1/1:1,8:9:14.98:123,15,0	0/0:15,0:12:12.37:0,12,84	0/0:10,0:7:9:0,9,82	0/0:24,0:24:57.14:0,57,607	1/1:3,18:21:32.95:271,33,0	1/1:1,8:11:28.01:210,28,0	1/1:7,20:27:1.91:426,2,0	0/0:12,0:11:18.01:0,18,181	0/0:31,0:31:81.67:0,82,859	0/0:22,0:22:29.53:0,30,519	0/0:25,0:25:54.41:0,54,577	0/0:16,0:16:39.04:0,39,390	0/0:18,0:18:39.10:0,39,416	0/0:11,0:11:21.01:0,21,212	0/0:15,0:15:33.08:0,33,352	0/0:35,0:35:87.08:0,87,886	0/0:19,2:20:4.85:0,5,463	1/1:6,22:28:59.87:485,60,0	1/1:4,24:28:62.89:517,63,0	1/1:2,9:11:20.97:172,21,0	0/1:12,1:15:16.30:16,0,225	0/0:16,0:16:23.56:0,24,303	0/1:8,2:10:0.60:1,0,191	1/1:3,18:21:41.94:345,42,0	0/0:21,0:22:59.97:0,60,607	1/1:5,27:32:80.88:665,81,0	0/0:1,0:1:3.01:0,3,32
chr10	105630888	.	GCAAA	G	3565.47	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=8.782;DP=587;FS=7.814;HRun=0;HaplotypeScore=101.6527;InbreedingCoeff=0.9229;MQ=63.24;MQ0=2;MQRankSum=-1.135;QD=20.61;ReadPosRankSum=0.607;VQSLOD=2.6594;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:15:30.08:0,30,495	1/1:1,10:11:27.04:405,27,0	0/0:36,0:29:24.08:0,24,515	0/0:22,0:19:9.03:0,9,178	0/0:36,0:36:72.20:0,72,1568	1/1:8,0:17:15:134,15,0	1/1:2,0:9:12.01:112,12,0	1/1:18,8:26:25.90:392,26,0	0/0:21,0:21:42.14:0,42,979	0/0:24,1:25:2.69:0,3,994	0/0:24,1:25:5.88:0,6,1159	0/0:19,0:19:48.16:0,48,1115	0/0:17,0:17:30.08:0,30,671	0/0:24,0:24:51.15:0,51,1143	0/0:20,0:20:42.14:0,42,977	0/0:19,0:19:42.06:0,42,906	0/0:4,0:23:48.16:0,48,840	0/0:7,0:26:30.01:0,30,483	1/1:14,7:21:17.98:261,18,0	1/1:13,13:26:42.10:647,42,0	1/1:6,15:21:39.13:628,39,0	0/0:23,0:23:54.17:0,54,1208	0/0:22,0:22:54.16:0,54,1230	0/0:6,0:6:12.04:0,12,288	1/1:4,0:10:9.01:84,9,0	0/0:23,0:23:42.12:0,42,959	1/1:8,24:32:57.19:902,57,0	0/0:12,0:12:30.10:0,30,719
chr10	105634021	.	AT	A	1660.54	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.540;DP=446;FS=4.245;HRun=5;HaplotypeScore=48.6672;InbreedingCoeff=0.9524;MQ=79.93;MQ0=0;MQRankSum=0.631;QD=26.36;ReadPosRankSum=1.911;VQSLOD=3.0746;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:39.13:0,39,533	0/0:2,0:2:6.02:0,6,82	0/0:13,0:13:35.66:0,36,424	0/0:13,0:13:27.08:0,27,344	0/0:17,0:17:45.15:0,45,615	1/1:1,20:21:57.16:646,57,0	1/1:2,20:22:51.14:578,51,0	0/0:26,0:26:63.20:0,63,849	0/0:18,0:18:48.13:0,48,635	0/0:20,0:20:54.18:0,54,739	0/0:13,0:13:30.07:0,30,390	0/0:17,0:17:51.11:0,51,660	0/0:16,0:16:45.07:0,45,559	0/0:19,0:19:51.17:0,51,696	0/0:12,0:12:36.12:0,36,492	0/0:15,0:15:42.14:0,42,566	0/0:20,0:20:60.20:0,60,820	0/0:12,0:12:36.12:0,36,487	0/0:21,0:21:57.19:0,57,779	0/0:12,0:12:33.08:0,33,431	0/0:14,0:14:39.12:0,39,518	0/0:13,0:13:36.06:0,36,453	0/0:11,0:11:30.10:0,30,410	0/0:4,0:4:12.04:0,12,164	1/1:1,19:20:51.14:578,51,0	0/0:19,0:19:54.17:0,54,725	0/0:24,0:24:66.18:0,66,869	0/0:17,0:17:51.16:0,51,682
chr10	105635514	.	A	ATG	3717.89	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-9.892;DP=944;FS=14.535;HRun=0;HaplotypeScore=114.8850;InbreedingCoeff=0.9312;MQ=58.11;MQ0=12;MQRankSum=0.516;QD=18.97;ReadPosRankSum=-1.308;VQSLOD=2.9568;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:66:99:0,156,1784	1/1:3,8:11:15.01:212,15,0	0/0:51,0:28:27.16:0,27,345	0/0:63,0:42:45.63:0,46,572	0/0:20,0:20:41.92:0,42,480	0/0:13,0:13:33.10:0,33,392	0/0:46,0:46:89.79:0,90,1043	1/1:18,16:31:45.15:697,45,0	0/0:39,0:40:99:0,105,1214	0/0:24,0:24:51.16:0,51,611	0/0:19,0:20:41.71:0,42,529	0/0:36,0:38:83.28:0,83,932	0/0:32,0:33:65.17:0,65,730	0/0:46,0:46:99:0,107,1199	0/0:40,0:40:87.08:0,87,1005	0/0:45,0:45:99:0,105,1231	0/0:37,0:38:89.61:0,90,996	0/0:15,0:15:39.12:0,39,466	1/1:16,14:30:0.41:524,0,0	1/1:5,8:14:9.03:144,9,0	1/1:30,52:82:56.38:1630,56,0	0/0:14,0:15:32.93:0,33,373	0/0:17,0:18:35.94:0,36,408	0/0:45,0:46:99:0,101,1246	0/0:19,0:19:45.61:0,46,534	0/0:33,0:33:66.10:0,66,757	1/1:6,18:23:33.11:511,33,0	0/0:17,0:16:27.08:0,27,324
chr10	105636301	.	T	TAGACAGACAGAC	4353.40	PASS	AB=0.615;AC=11;AF=0.196;AN=56;BaseQRankSum=-3.103;DP=793;FS=0.642;HRun=0;HaplotypeScore=260.0357;InbreedingCoeff=0.8734;MQ=63.37;MQ0=10;MQRankSum=-4.978;QD=29.22;ReadPosRankSum=-4.503;VQSLOD=3.3596;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:84.27:0,84,2677	0/1:3,0:8:8.01:13,0,8	0/0:34,0:20:9.03:0,9,216	0/0:41,0:32:35.85:0,36,685	0/0:25,0:25:45.14:0,45,1416	0/0:19,0:20:36.11:0,36,874	0/0:35,0:35:63.22:0,63,1979	1/1:23,0:14:9.03:329,9,0	0/0:35,0:36:81.26:0,81,2548	0/0:31,0:30:56.20:0,56,1400	0/0:21,0:22:48.11:0,48,1316	0/0:22,0:22:42.14:0,42,1344	0/0:21,0:22:42.14:0,42,1340	0/0:33,0:33:63.22:0,63,2036	0/0:41,0:41:84.27:0,84,2508	0/0:40,0:40:75.25:0,75,2329	0/0:27,0:28:57.18:0,57,1750	0/0:37,0:37:90.29:0,90,2761	1/1:18,7:26:32.78:1448,33,0	1/1:22,11:33:11.97:672,12,0	1/1:37,0:37:29.95:781,30,0	0/0:29,0:29:69.22:0,69,2109	0/0:24,0:24:51.16:0,51,1476	0/0:27,0:27:63.15:0,63,2046	0/0:19,0:19:33.11:0,33,1057	0/0:26,0:26:39.13:0,39,1246	1/1:15,4:19:21.07:1111,21,0	0/0:11,0:11:27.09:0,27,882
chr10	105636399	.	A	AGAGAG	2886.02	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=-2.715;DP=708;FS=16.102;HRun=0;HaplotypeScore=140.2344;InbreedingCoeff=0.9522;MQ=74.75;MQ0=2;MQRankSum=-4.960;QD=23.66;ReadPosRankSum=-1.459;VQSLOD=1.8381;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:93.26:0,93,1628	0/0:2,0:2:3.01:0,3,55	0/0:39,0:23:26.39:0,26,348	0/0:69,0:46:41.95:0,42,461	0/0:17,0:17:28.05:0,28,541	0/0:25,0:25:51.17:0,51,933	0/0:27,0:27:57.20:0,57,1054	1/1:14,1:16:24.02:448,24,0	0/0:19,0:19:39.13:0,39,719	0/0:31,0:31:65.27:0,65,1212	0/0:13,0:13:30.09:0,30,524	0/0:18,0:18:30.05:0,30,490	0/0:22,0:22:51.17:0,51,908	0/0:27,0:27:51.17:0,51,942	0/0:31,0:31:54.16:0,54,939	0/0:32,0:32:66.20:0,66,1153	0/0:43,0:43:84.21:0,84,1424	0/0:19,0:19:45.08:0,45,730	1/1:16,4:20:24.07:605,24,0	1/1:17,7:24:36.04:822,36,0	1/1:23,23:46:29.07:756,29,0	0/0:24,0:24:48.16:0,48,860	0/0:9,0:10:17.90:0,18,271	0/0:25,0:25:60.15:0,60,1033	0/0:16,0:16:24.08:0,24,436	0/0:26,0:26:54.17:0,54,931	1/1:4,9:14:15.05:427,15,0	./.
chr10	105638366	.	G	GATTT	1345.07	PASS	AC=12;AF=0.316;AN=38;BaseQRankSum=-1.937;DP=293;FS=3.285;HRun=0;HaplotypeScore=46.4016;InbreedingCoeff=0.6944;MQ=58.92;MQ0=0;MQRankSum=-1.723;QD=14.31;ReadPosRankSum=-3.164;VQSLOD=2.1527;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:27.05:0,27,391	./.	./.	./.	0/0:9,0:9:3.01:0,3,46	1/1:6,4:11:3.01:70,3,0	./.	1/1:34,0:34:30.01:459,30,0	0/0:7,0:7:6.02:0,6,93	0/0:17,0:17:12.04:0,12,180	0/0:11,0:11:9.02:0,9,118	0/0:6,0:6:3.01:0,3,46	0/0:8,0:8:9.03:0,9,139	./.	0/0:7,0:7:3.01:0,3,46	0/0:9,0:9:12.04:0,12,186	0/0:28,0:27:42.13:0,42,624	0/0:16,0:16:24.08:0,24,371	1/1:11,4:15:12.04:255,12,0	1/1:5,2:7:6.02:141,6,0	./.	./.	./.	./.	1/1:11,6:17:18.06:422,18,0	0/0:8,0:8:6.02:0,6,93	1/1:5,5:10:6.02:141,6,0	0/0:13,0:13:12.04:0,12,185
chr10	105638520	.	TCACACA	T	350.87	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=2.917;DP=359;FS=0.000;HRun=0;HaplotypeScore=78.7858;InbreedingCoeff=0.6149;MQ=61.67;MQ0=0;MQRankSum=-4.419;QD=9.00;ReadPosRankSum=0.557;VQSLOD=1.8408;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:24.08:0,24,517	0/0:4,0:4:3.01:0,3,46	./.	./.	0/0:12,0:13:27.07:0,27,757	1/1:9,11:20:18.06:345,18,0	1/1:6,3:9:3.01:61,3,0	0/0:24,0:23:18.06:0,18,421	0/0:3,0:3:3.01:0,3,97	0/0:13,0:13:21.07:0,21,518	0/0:8,0:8:12.04:0,12,313	0/0:8,0:8:15.05:0,15,461	0/0:8,0:8:9.03:0,9,292	0/0:8,0:8:15.05:0,15,408	0/0:12,0:12:21.07:0,21,510	0/0:12,0:11:27.09:0,27,851	0/0:19,0:19:36.12:0,36,1050	0/0:15,0:16:33.11:0,33,855	0/0:19,0:19:31.45:0,31,692	0/0:11,0:11:12.04:0,12,315	0/0:26,0:26:40:0,40,950	0/0:7,0:7:6.02:0,6,194	0/0:11,0:11:15.02:0,15,411	0/0:14,0:13:18.06:0,18,527	1/1:7,3:10:3.01:61,3,0	0/0:16,0:16:24.08:0,24,627	0/0:8,0:11:3.01:0,3,78	0/0:7,0:7:12.04:0,12,361
chr10	105639113	.	TAC	T	207.12	PASS	AB=0.939;AC=5;AF=0.089;AN=56;BaseQRankSum=11.260;DP=861;FS=2.151;HRun=0;HaplotypeScore=126.8331;InbreedingCoeff=0.5414;MQ=61.97;MQ0=3;MQRankSum=0.238;QD=2.38;ReadPosRankSum=1.702;VQSLOD=2.6927;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,2:40:78.10:0,78,1316	0/0:12,0:12:36.11:0,36,610	0/0:31,0:23:51.41:0,51,734	0/0:23,0:19:39.82:0,40,571	0/0:21,0:21:57.18:0,57,972	0/1:26,0:26:0.02:89,0,0	0/1:26,0:25:6.84:74,0,7	0/0:50,0:50:99:0,134,2169	0/0:59,0:59:99:0,169,2916	0/0:58,0:58:99:0,157,2675	0/0:11,0:11:27.09:0,27,479	0/0:31,0:31:90.29:0,90,1529	0/0:43,0:43:99:0,117,1955	0/0:42,0:42:99:0,123,2080	0/0:57,0:57:99:0,157,2694	0/0:38,0:38:99:0,111,1923	0/0:20,0:20:54.08:0,54,839	0/1:14,4:18:88.86:89,0,583	0/0:12,0:10:30.10:0,30,521	0/0:17,0:17:48.14:0,48,805	0/0:52,0:51:99:0,138,2294	0/0:20,0:20:57.18:0,57,960	0/0:13,0:13:36.12:0,36,622	0/0:23,1:24:60.20:0,60,1038	1/1:17,0:17:24.42:78,24,0	0/0:44,0:44:99:0,123,2137	0/0:28,0:28:78.14:0,78,1333	0/0:27,0:27:72.70:0,73,1249
chr10	105639117	.	CACAT	C	2292.39	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.286;DP=850;FS=4.202;HRun=0;HaplotypeScore=151.3781;InbreedingCoeff=0.9991;MQ=60.86;MQ0=3;MQRankSum=0.700;QD=32.75;ReadPosRankSum=2.255;VQSLOD=3.8994;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:75.12:0,75,1818	0/0:12,0:12:33.09:0,33,792	0/0:28,0:22:40.02:0,40,817	0/0:22,0:18:35.92:0,36,705	0/0:21,0:21:60.21:0,60,1495	1/1:1,25:26:57.09:1006,57,0	1/1:3,25:27:48.16:847,48,0	0/0:47,0:47:90.79:0,91,2297	0/0:59,0:59:99:0,163,4042	0/0:56,0:56:99:0,141,3523	0/0:10,0:10:30.10:0,30,735	0/0:30,0:30:78.25:0,78,1942	0/0:42,0:42:99:0,105,2598	0/0:42,0:42:99:0,108,2695	0/0:55,0:55:99:0,144,3418	0/0:41,0:41:99:0,114,2716	0/0:19,0:20:36.10:0,36,863	0/0:18,0:18:41.91:0,42,813	0/0:13,0:11:30.09:0,30,717	0/0:17,0:17:39.13:0,39,993	0/0:51,0:50:99:0,114,2783	0/0:20,0:20:51.17:0,51,1253	0/0:13,0:13:30.10:0,30,770	0/0:24,0:24:53.93:0,54,1217	1/1:1,15:16:32.70:582,33,0	0/0:43,0:43:99:0,108,2769	0/0:29,0:29:81.09:0,81,1815	0/0:27,0:27:73.10:0,73,1787
chr10	105639924	.	GCACACACACACACACATACACA	G	1313.41	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.137;DP=744;FS=0.000;HRun=0;HaplotypeScore=380.7693;InbreedingCoeff=0.9086;MQ=62.66;MQ0=12;MQRankSum=-4.989;QD=21.53;ReadPosRankSum=2.903;VQSLOD=1.1255;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,111,7740	0/0:12,0:12:27.56:0,28,1991	0/0:37,0:25:42.13:0,42,1197	0/0:45,0:29:51.16:0,51,1446	0/0:33,0:34:93.29:0,93,6415	1/1:3,16:18:12.04:709,12,0	1/1:7,23:29:2.99:177,3,0	0/0:42,0:42:81.27:0,81,3057	0/0:15,0:17:45.15:0,45,3228	0/0:28,0:28:39.73:0,40,4083	0/0:23,0:26:69.24:0,69,5201	0/0:28,0:28:72.22:0,72,4311	0/0:18,0:18:54.18:0,54,4236	0/0:23,0:24:66.21:0,66,4611	0/0:19,0:19:51.18:0,51,3685	0/0:17,0:17:45.15:0,45,3370	0/0:22,0:22:57.20:0,57,4785	0/0:20,0:21:51.17:0,51,3456	0/0:14,0:13:27.09:0,27,1195	0/0:25,0:25:54.16:0,54,3641	0/0:67,0:67:99:0,132,9001	0/0:21,0:24:54.19:0,54,4230	0/0:17,0:18:51.17:0,51,3951	0/0:34,0:34:93.32:0,93,7912	1/1:0,12:12:12:551,12,0	0/0:29,0:30:69.24:0,69,4134	0/0:19,0:20:45.10:0,45,2957	0/0:12,0:11:33.11:0,33,2941
chr10	105639941	.	TAC	T	4173.36	PASS	AB=0.955;AC=17;AF=0.304;AN=56;BaseQRankSum=5.952;DP=834;FS=7.223;HRun=0;HaplotypeScore=121.9496;InbreedingCoeff=0.5807;MQ=54.81;MQ0=30;MQRankSum=-2.212;QD=12.53;ReadPosRankSum=-1.426;VQSLOD=2.4993;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,1:48:65.39:0,65,1412	0/0:13,0:13:4.30:0,4,310	0/0:42,0:14:16.89:0,17,228	0/0:63,0:26:3.81:0,4,127	0/0:35,0:34:47.60:0,48,1202	0/1:18,0:17:9.76:41,0,10	1/1:26,0:25:2.84:14,3,0	1/1:31,11:41:77.79:949,78,0	0/0:23,0:22:44.70:0,45,607	0/0:28,0:29:22.54:0,23,803	0/0:25,0:25:53.97:0,54,823	0/0:25,1:26:17.48:0,17,696	0/0:21,0:20:48.16:0,48,744	0/0:25,0:25:54.35:0,54,887	0/1:23,0:23:14.58:15,0,716	0/0:19,0:19:45.15:0,45,717	0/1:27,1:28:3.85:4,0,863	0/0:24,0:24:49.83:0,50,698	0/1:16,4:18:3.42:220,0,3	1/1:8,18:25:47.97:569,48,0	1/1:34,49:80:99:1822,153,0	0/1:31,0:30:1.27:1,0,891	0/0:19,2:21:17.19:0,17,719	0/0:36,1:37:22.80:0,23,1307	1/1:14,0:14:8.52:42,9,0	0/0:35,0:35:38.61:0,39,982	1/1:4,15:18:42.11:497,42,0	0/0:13,0:12:33.10:0,33,501
chr10	105639998	.	G	GCA	7370.20	PASS	AB=0.621;AC=15;AF=0.268;AN=56;BaseQRankSum=-7.737;DP=850;FS=2.035;HRun=0;HaplotypeScore=124.7521;InbreedingCoeff=0.7020;MQ=57.99;MQ0=22;MQRankSum=0.845;QD=24.90;ReadPosRankSum=-2.753;VQSLOD=4.8887;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,129,1539	0/1:1,4:5:24.90:135,0,25	0/0:87,0:18:20.03:0,20,172	0/0:76,0:16:29.39:0,29,248	0/0:23,0:23:51.16:0,51,628	0/1:8,9:15:14.46:362,0,14	1/1:17,16:34:26.28:901,26,0	1/1:26,22:47:6.06:1270,6,0	0/0:17,0:17:36.11:0,36,442	0/0:24,0:24:51.05:0,51,576	0/0:14,0:14:18.06:0,18,222	0/0:23,0:23:57.16:0,57,688	0/0:15,0:14:25.84:0,26,319	0/0:25,0:25:50.09:0,50,597	0/0:20,0:20:36.11:0,36,443	0/0:16,0:16:39.07:0,39,450	0/0:27,0:27:63.15:0,63,746	0/0:27,0:27:37.26:0,37,697	0/1:8,9:17:9.85:357,0,10	1/1:5,8:13:24.08:391,24,0	1/1:43,79:125:99:3046,158,0	0/0:22,0:22:50.98:0,51,594	0/0:19,0:19:33.10:0,33,405	0/0:29,0:33:71.55:0,72,810	1/1:8,3:11:12.04:191,12,0	0/0:22,0:21:48.15:0,48,588	1/1:10,15:25:45.15:717,45,0	0/0:6,0:6:9.03:0,9,110
chr10	105641618	.	G	GGCTCCGACTGGAGAGAT	28720.30	PASS	AB=0.714;AC=53;AF=0.981;AN=54;BaseQRankSum=0.357;DP=263;FS=22.021;HRun=0;HaplotypeScore=284.2279;InbreedingCoeff=-0.0327;MQ=51.87;MQ0=0;MQRankSum=0.031;QD=109.62;ReadPosRankSum=1.598;VQSLOD=3.5494;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:28.30:1591,28,0	1/1:9,0:9:21.07:1347,21,0	1/1:1,1:5:5.02:448,5,0	0/1:3,0:5:16.10:72,0,16	1/1:7,0:7:15.05:1045,15,0	1/1:12,0:12:27.08:1254,27,0	1/1:10,0:10:26.92:1118,27,0	1/1:11,0:10:30.09:1227,30,0	1/1:3,0:3:6.02:435,6,0	1/1:12,0:12:32.11:1444,32,0	1/1:9,0:9:18.06:823,18,0	1/1:10,0:10:20.96:1196,21,0	1/1:12,0:12:24.08:1293,24,0	1/1:6,0:6:12:650,12,0	1/1:11,0:11:21.07:851,21,0	1/1:7,0:7:12.04:661,12,0	1/1:15,0:15:37.68:2230,38,0	1/1:10,0:10:27.09:1591,27,0	1/1:9,0:9:24.08:1293,24,0	1/1:13,0:13:27.05:1064,27,0	1/1:11,0:11:27.09:1154,27,0	1/1:5,0:5:15.05:864,15,0	1/1:5,0:5:14.64:738,15,0	1/1:15,0:15:23.81:961,24,0	1/1:11,0:11:21.05:1221,21,0	1/1:9,0:9:21.06:734,21,0	1/1:11,0:11:24.07:1415,24,0	./.
chr10	105645795	.	TA	T	4584.95	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.287;DP=607;FS=1.196;HRun=2;HaplotypeScore=57.8348;InbreedingCoeff=0.9985;MQ=77.99;MQ0=0;MQRankSum=-1.892;QD=34.47;ReadPosRankSum=0.637;VQSLOD=4.9428;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,1924	1/1:1,8:9:20.66:266,21,0	0/0:23,0:22:63.20:0,63,910	0/0:24,0:24:69.20:0,69,999	0/0:21,0:21:63.20:0,63,922	0/0:19,0:19:54.18:0,54,809	0/0:14,0:14:42.14:0,42,628	1/1:0,20:20:60.14:734,60,0	0/0:25,0:25:72.24:0,72,1077	0/0:25,0:25:72.23:0,72,1045	0/0:10,0:10:30.10:0,30,448	0/0:21,0:21:63.19:0,63,902	0/0:20,0:20:60.20:0,60,892	0/0:30,0:30:87.29:0,87,1301	0/0:20,0:20:57.16:0,57,830	0/0:16,0:16:48.16:0,48,718	0/0:26,0:26:75.24:0,75,1096	0/0:28,0:28:84.25:0,84,1216	1/1:1,14:15:42.11:518,42,0	1/1:0,13:13:33.11:428,33,0	1/1:1,49:50:99:1792,138,0	0/0:15,0:15:45.13:0,45,634	0/0:11,0:11:24.08:0,24,358	0/0:27,0:27:81.26:0,81,1193	0/0:16,0:16:48.16:0,48,719	0/0:27,0:27:78.26:0,78,1151	1/1:1,25:26:66.21:847,66,0	0/0:12,0:12:36.08:0,36,514
chr10	105646491	.	TTTTTTTTTTG	T	2850.97	PASS	AB=0.794;AC=10;AF=0.179;AN=56;BaseQRankSum=9.399;DP=690;FS=8.732;HRun=0;HaplotypeScore=199.2013;InbreedingCoeff=0.7448;MQ=72.90;MQ0=15;MQRankSum=-1.096;QD=17.07;ReadPosRankSum=-3.336;VQSLOD=1.2163;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,129,5356	1/1:2,5:7:21.06:496,21,0	0/1:62,0:26:2.20:2,0,269	0/0:53,0:26:17.60:0,18,230	0/0:30,0:30:84.17:0,84,2941	0/0:16,0:16:42.07:0,42,1681	0/0:19,0:19:42.09:0,42,1833	1/1:12,26:38:73.45:927,73,0	0/0:20,0:19:41.98:0,42,1326	0/0:31,0:30:77.43:0,77,2945	0/0:23,0:23:24.93:0,25,1676	0/0:22,0:22:48.10:0,48,1930	0/0:16,0:16:30.07:0,30,1119	0/0:18,0:18:41.81:0,42,1610	0/0:35,0:35:87.23:0,87,3390	0/0:25,0:25:66.15:0,66,2533	0/0:24,0:24:35.34:0,35,2371	0/0:11,0:11:29.83:0,30,1046	0/1:6,14:19:46.85:596,0,47	1/1:5,16:21:32.32:520,32,0	0/0:7,12:18:1.20:0,1,17	0/0:12,0:12:28.30:0,28,916	0/0:21,0:21:60.17:0,60,2299	0/0:18,0:18:54.10:0,54,2158	0/0:31,0:31:78.15:0,78,3268	0/0:25,0:25:63.13:0,63,2425	1/1:17,1:18:37.47:473,37,0	0/0:8,0:8:14.89:0,15,339
chr10	105647446	.	CTTATTTATTTATTTAT	C	2034.86	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=5.838;DP=295;FS=3.368;HRun=0;HaplotypeScore=121.3526;InbreedingCoeff=0.7015;MQ=59.01;MQ0=3;MQRankSum=-6.584;QD=39.90;ReadPosRankSum=-0.457;VQSLOD=3.1008;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:21.07:0,21,1361	1/1:2,3:5:9.03:400,9,0	0/0:16,0:9:0.89:0,1,2	0/0:6,0:4:3.01:0,3,56	0/0:12,0:12:15.05:0,15,1116	0/0:9,0:16:21.07:0,21,868	./.	1/1:19,0:19:18.06:296,18,0	0/0:6,0:6:9.02:0,9,401	0/0:10,0:10:15.05:0,15,1142	0/0:6,0:6:9.03:0,9,467	0/0:9,0:9:6.02:0,6,288	0/0:10,0:10:6.02:0,6,451	0/0:10,0:10:3.01:0,3,63	0/0:7,0:7:12.04:0,12,777	0/0:10,0:10:12.04:0,12,917	0/0:26,0:26:36.12:0,36,2273	0/0:15,0:15:21.07:0,21,1284	./.	1/1:5,9:14:15.05:666,15,0	1/1:3,0:3:3:25,3,0	0/0:5,0:5:6.02:0,6,459	0/0:6,0:6:6.02:0,6,447	0/0:7,0:7:15.05:0,15,717	0/0:4,0:9:15.05:0,15,552	0/0:15,0:15:18.06:0,18,980	1/1:4,6:10:18.06:800,18,0	0/0:17,0:16:42.14:0,42,2599
chr10	105647465	.	AT	A	131.73	PASS	AB=0.842;AC=8;AF=0.148;AN=54;BaseQRankSum=6.681;DP=199;FS=3.209;HRun=3;HaplotypeScore=30.8645;InbreedingCoeff=0.4467;MQ=52.91;MQ0=15;MQRankSum=-5.330;QD=3.56;ReadPosRankSum=1.115;VQSLOD=0.1391;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:24.08:0,24,342	0/1:4,0:4:10.08:10,0,26	0/0:4,0:1:0.89:0,1,2	0/0:4,0:1:3.01:0,3,41	0/0:10,0:8:21.07:0,21,300	0/0:13,0:12:14.87:0,15,167	./.	0/1:7,6:13:99:151,0,232	0/0:4,0:4:9.02:0,9,110	0/0:7,0:7:18.05:0,18,240	0/0:5,0:5:15.05:0,15,212	0/0:3,0:3:9.03:0,9,128	0/0:4,0:4:12.04:0,12,173	0/0:3,0:2:3.01:0,3,41	0/0:5,0:5:15.05:0,15,209	0/0:4,0:4:12.04:0,12,173	0/0:24,0:21:48.16:0,48,673	0/0:12,0:11:27.09:0,27,384	0/0:2,0:2:3.01:0,3,37	1/1:10,0:9:10.92:33,11,0	1/1:1,1:2:2.99:24,3,0	0/0:2,0:2:6.02:0,6,86	0/0:5,0:4:9.03:0,9,127	0/0:6,0:6:15.05:0,15,210	0/0:10,0:9:10.44:0,10,126	0/0:9,0:8:21.07:0,21,299	1/1:7,1:8:13.94:47,14,0	0/0:17,0:16:48.16:0,48,681
chr10	105649383	.	T	TTG	357.66	PASS	AB=0.912;AC=12;AF=0.231;AN=52;BaseQRankSum=-1.931;DP=677;FS=5.320;HRun=0;HaplotypeScore=108.9445;InbreedingCoeff=0.1346;MQ=71.37;MQ0=14;MQRankSum=-0.682;QD=1.52;ReadPosRankSum=-2.381;VQSLOD=1.4344;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:36:9.85:0,10,47	1/1:10,0:10:2.91:25,3,0	./.	./.	0/0:25,0:25:15.01:0,15,143	0/1:12,9:23:46.86:95,0,47	1/1:18,3:21:12.02:157,12,0	0/1:26,0:25:0:0,0,0	0/0:24,0:24:29.65:0,30,315	0/0:31,0:29:2.46:0,2,21	0/1:18,0:19:30.44:34,0,30	0/1:32,1:34:11.34:11,0,259	0/0:23,0:24:23.67:0,24,199	0/0:20,0:20:29.88:0,30,293	0/0:19,0:31:22.36:0,22,108	0/0:26,0:26:41.87:0,42,411	0/1:24,1:24:42.08:42,0,135	0/0:18,0:18:10.04:0,10,150	0/1:18,0:17:0:0,0,0	0/0:12,0:16:0.61:0,1,2	0/1:39,0:41:7.73:8,0,62	0/0:19,0:19:15.03:0,15,161	0/0:17,0:15:11.99:0,12,105	0/0:25,0:27:0.89:0,1,178	0/1:10,7:17:49.33:118,0,49	0/0:28,0:28:12:0,12,119	0/0:16,0:19:8.67:0,9,90	0/0:7,0:8:2.84:0,3,14
chr10	105654153	.	C	CT	1723.76	PASS	AB=0.708;AC=12;AF=0.214;AN=56;BaseQRankSum=-0.827;DP=499;FS=18.485;HRun=10;HaplotypeScore=58.6850;InbreedingCoeff=0.7802;MQ=56.41;MQ0=22;MQRankSum=-7.297;QD=14.61;ReadPosRankSum=-1.241;VQSLOD=1.8653;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:17:32.96:0,33,271	1/1:1,3:7:17.46:136,17,0	0/0:15,0:10:23.65:0,24,187	0/0:11,0:4:8.95:0,9,67	0/0:29,2:31:7.94:0,8,478	0/0:20,1:21:5.23:0,5,260	0/1:7,0:6:0.68:1,0,39	1/1:7,19:23:54.03:540,54,0	0/0:14,0:14:13.15:0,13,183	0/0:19,0:19:35.90:0,36,291	0/0:14,0:16:35.01:0,35,297	0/0:22,0:23:41.73:0,42,401	0/0:19,0:19:44.92:0,45,366	0/0:10,0:9:17.93:0,18,142	0/0:12,0:12:13.31:0,13,227	0/0:14,0:16:25.35:0,25,231	0/0:33,1:30:10.92:0,11,387	0/0:18,0:18:12.20:0,12,221	1/1:7,10:14:24.05:288,24,0	1/1:5,16:20:45.08:466,45,0	0/1:8,7:12:5.71:143,0,6	0/0:8,0:9:17.40:0,17,167	0/0:12,0:12:26.82:0,27,215	0/0:19,0:18:15.17:0,15,246	0/0:17,0:20:27.58:0,28,289	0/0:18,0:17:44.91:0,45,367	1/1:6,15:19:32.98:325,33,0	0/0:19,0:16:21.59:0,22,315
chr10	105655136	.	A	AT	701.82	PASS	AB=0.773;AC=26;AF=0.684;AN=38;BaseQRankSum=1.853;DP=151;FS=0.000;HRun=0;HaplotypeScore=14.6139;InbreedingCoeff=0.6206;MQ=29.93;MQ0=33;MQRankSum=-1.487;QD=9.11;ReadPosRankSum=1.818;VQSLOD=3.1099;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	1/1:13,0:11:26.52:164,27,0	1/1:5,0:3:5.88:36,6,0	0/0:12,0:5:11.92:0,12,87	1/1:7,0:7:14.72:91,15,0	1/1:2,0:2:5.96:48,6,0	./.	1/1:2,0:2:2.94:18,3,0	./.	0/1:1,5:5:0:0,0,0	1/1:4,0:4:5.88:36,6,0	1/1:4,0:3:8.83:54,9,0	1/1:5,0:4:2.94:18,3,0	1/1:10,0:8:17.85:128,18,0	0/0:6,0:5:11.94:0,12,94	0/0:9,0:8:11.94:0,12,96	0/0:2,0:2:3:0,3,27	./.	0/1:3,0:3:0:0,0,0	./.	1/1:3,0:3:2.94:18,3,0	1/1:10,0:9:23.89:189,24,0	0/0:7,0:6:8.91:0,9,61	1/1:3,0:2:5.91:38,6,0
chr10	105656743	.	C	CATCTACA	2810.05	PASS	AB=0.815;AC=33;AF=0.589;AN=56;BaseQRankSum=7.248;DP=405;FS=3.052;HRun=0;HaplotypeScore=164.0294;InbreedingCoeff=-0.0770;MQ=58.01;MQ0=3;MQRankSum=-0.460;QD=8.10;ReadPosRankSum=0.191;VQSLOD=2.8525;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,1:18:3.93:88,4,0	0/0:4,0:4:9.03:0,9,213	0/0:18,0:10:36.59:0,37,576	0/0:15,0:12:39.13:0,39,610	0/1:8,0:13:2.33:67,0,2	0/1:6,0:14:27.93:207,0,28	0/1:9,0:9:79.98:144,0,80	0/1:28,0:28:99:158,0,822	1/1:13,0:22:17.16:136,17,0	0/0:21,0:21:60.21:0,60,1326	0/1:9,0:9:0.73:1,0,225	0/1:6,0:17:13.78:223,0,14	0/1:7,0:17:89.78:144,0,90	1/1:9,0:23:15.39:239,15,0	1/1:10,0:22:29.46:200,29,0	0/1:8,0:19:74.16:147,0,74	0/1:10,0:12:78.29:176,0,78	0/1:4,0:4:84.77:85,0,86	0/1:7,0:7:4.93:5,0,244	0/1:12,0:19:11.86:73,0,12	0/1:9,0:9:40.22:45,0,40	1/1:0,0:7:5.95:42,6,0	1/1:4,0:13:17.88:130,18,0	1/1:3,0:12:23.54:169,24,0	1/1:8,0:13:6.02:83,6,0	0/1:10,0:20:99:250,0,390	0/1:10,0:13:98.77:99,0,284	1/1:1,0:4:11.67:75,12,0
chr10	105659431	.	GGT	G	649.88	PASS	AB=0.881;AC=25;AF=0.446;AN=56;BaseQRankSum=10.414;DP=745;FS=3.907;HRun=0;HaplotypeScore=102.5814;InbreedingCoeff=-0.1727;MQ=64.48;MQ0=17;MQRankSum=2.580;QD=1.58;ReadPosRankSum=0.012;VQSLOD=2.0185;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,1:43:24.21:0,24,1103	1/1:1,0:3:5.68:28,6,0	0/0:58,0:28:2.50:0,2,99	0/0:50,0:24:18.03:0,18,213	0/1:11,5:16:99:105,0,293	0/1:14,4:18:99:102,0,349	0/1:45,2:48:52.44:52,0,940	1/1:10,0:19:9.76:82,10,0	0/1:18,3:22:7.17:7,0,493	0/1:22,2:25:24.27:24,0,710	0/1:11,2:13:10.75:11,0,302	0/0:19,0:19:36.12:0,36,539	0/1:20,2:22:24.71:25,0,534	0/0:27,1:29:13.91:0,14,810	0/1:17,1:18:2.06:2,0,435	0/0:13,1:15:6.93:0,7,265	0/1:27,8:36:99:153,0,762	0/0:46,0:46:96.27:0,96,1445	1/1:17,0:18:4.61:59,5,0	1/1:12,0:12:2.37:8,2,0	0/0:73,0:73:2.62:0,3,25	0/1:12,1:13:5.07:5,0,381	0/1:7,1:8:20.12:20,0,174	0/1:34,2:38:21.32:21,0,966	0/1:22,3:26:21.26:21,0,752	0/1:20,2:22:24.78:25,0,543	1/1:14,0:14:8.58:44,9,0	0/1:17,3:19:19.15:19,0,626
chr10	105659443	.	TGTGTGTGTGTGTGCGTGCGTGC	T	1655.62	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.203;DP=758;FS=3.675;HRun=0;HaplotypeScore=340.4893;InbreedingCoeff=0.8724;MQ=57.07;MQ0=20;MQRankSum=-3.354;QD=27.14;ReadPosRankSum=-2.993;VQSLOD=0.9187;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:96.28:0,96,4971	0/0:3,0:3:9.03:0,9,334	0/0:52,0:20:19.97:0,20,453	0/0:52,0:20:38.93:0,39,682	0/0:20,0:20:45.15:0,45,2268	0/0:19,0:19:48.15:0,48,2443	0/0:46,0:46:99:0,108,5773	1/1:16,0:15:26.87:467,27,0	0/0:23,0:23:54.19:0,54,3519	0/0:26,0:26:75.23:0,75,3849	0/0:14,0:14:30.08:0,30,1849	0/0:23,0:23:51.04:0,51,3064	0/0:22,0:22:60.14:0,60,3403	0/0:30,0:30:81.25:0,81,4963	0/0:17,0:17:42.62:0,43,2600	0/0:17,0:17:33.10:0,33,2401	0/0:32,0:32:84.22:0,84,5856	0/0:43,0:43:99:0,114,7691	1/1:4,14:17:41.41:623,41,0	1/1:0,11:11:2.63:173,3,0	0/0:13,72:85:4.72:0,5,21	0/0:12,0:12:36.11:0,36,2001	0/0:8,0:8:15.05:0,15,1375	0/0:40,0:40:99:0,108,6384	0/0:25,0:25:66.12:0,66,3793	0/0:26,0:26:72.04:0,72,3566	1/1:2,14:16:9.03:538,9,0	0/0:20,0:19:54.03:0,54,3231
chr10	105660710	.	G	GCCTC	11988.96	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-12.426;DP=780;FS=1.068;HRun=0;HaplotypeScore=123.4966;InbreedingCoeff=0.9998;MQ=76.99;MQ0=0;MQRankSum=-9.291;QD=64.46;ReadPosRankSum=-1.837;VQSLOD=6.0746;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,2056	1/1:1,12:13:27.09:731,27,0	0/0:21,0:21:60.18:0,60,1105	0/0:17,0:17:47.75:0,48,847	0/0:27,0:27:72.23:0,72,1361	0/0:32,0:32:96.32:0,96,1814	0/0:23,0:23:69.24:0,69,1319	1/1:10,27:37:99:2823,105,0	0/0:31,0:31:87.28:0,87,1652	0/0:25,0:25:66.23:0,66,1278	0/0:27,0:27:81.28:0,81,1570	0/0:37,0:37:99:0,108,2079	0/0:24,0:24:63.20:0,63,1188	0/0:25,0:25:75.24:0,75,1418	0/0:34,0:34:99:0,99,1878	0/0:27,0:27:75.26:0,75,1427	0/0:30,0:30:90.31:0,90,1745	0/0:20,0:20:60.21:0,60,1162	1/1:8,9:18:45.13:1138,45,0	1/1:2,30:32:87.26:2318,87,0	1/1:3,47:53:99:2873,105,0	0/0:20,0:20:54.19:0,54,1046	0/0:20,0:20:60.19:0,60,1120	0/0:35,0:35:99:0,102,1936	0/0:21,0:21:57.18:0,57,1072	0/0:41,0:41:99:0,120,2277	1/1:4,27:33:81.23:2106,81,0	0/0:18,0:18:54.14:0,54,1009
chr10	105661945	.	TG	T	4217.87	PASS	AB=0.973;AC=44;AF=0.786;AN=56;BaseQRankSum=-8.230;DP=640;FS=10.318;HRun=2;HaplotypeScore=121.1277;InbreedingCoeff=-0.0303;MQ=60.71;MQ0=9;MQRankSum=5.669;QD=7.23;ReadPosRankSum=-2.005;VQSLOD=0.6815;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:36.27:43,0,36	1/1:10,0:10:17.07:144,17,0	0/0:57,0:18:22.08:0,22,207	0/1:39,1:11:1.28:1,0,45	0/1:30,0:30:4.55:204,0,5	1/1:22,1:23:11.81:181,12,0	1/1:17,0:16:13.68:120,14,0	1/1:23,1:26:30.93:279,31,0	0/1:18,0:18:12.99:71,0,13	1/1:34,0:35:35.68:493,36,0	1/1:10,0:11:5:38,5,0	0/1:11,0:11:7.79:50,0,8	1/1:18,0:18:1.45:66,1,0	1/1:15,0:15:15.60:131,16,0	1/1:20,3:23:1.43:190,1,0	0/1:25,0:27:28.64:114,0,29	1/1:29,1:32:25.39:328,25,0	0/1:27,1:28:15.40:190,0,15	1/1:21,2:21:38.60:283,39,0	1/1:26,2:28:33.41:314,33,0	1/1:14,0:13:11.95:113,12,0	0/1:20,0:20:1.96:90,0,2	0/1:15,0:15:7.16:145,0,7	1/1:12,0:12:5.68:88,6,0	1/1:14,1:15:9.89:161,10,0	1/1:27,0:26:16.32:189,16,0	0/1:24,2:26:5.50:140,0,5	1/1:12,0:12:0.20:51,0,0
chr10	105663605	.	TTTTA	T	481.66	PASS	AB=0.969;AC=15;AF=0.375;AN=40;BaseQRankSum=5.748;DP=299;FS=2.408;HRun=0;HaplotypeScore=44.9555;InbreedingCoeff=0.5038;MQ=65.28;MQ0=2;MQRankSum=1.231;QD=4.08;ReadPosRankSum=-2.258;VQSLOD=1.2300;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:30.08:0,30,661	0/0:3,0:3:3.01:0,3,71	./.	./.	0/0:16,0:16:6.01:0,6,96	1/1:3,4:7:3.01:47,3,0	./.	1/1:27,8:32:21:216,21,0	0/0:9,0:9:15.05:0,15,354	./.	./.	0/0:6,0:6:3.01:0,3,71	./.	0/0:9,0:8:3.01:0,3,64	0/0:9,0:9:12.04:0,12,274	0/0:6,0:6:6.01:0,6,96	0/0:20,0:20:39.12:0,39,874	0/0:25,0:25:42.14:0,42,943	1/1:12,2:14:6.02:94,6,0	1/1:3,2:5:6.02:94,6,0	1/1:5,1:6:3.01:47,3,0	./.	0/0:5,0:5:3.01:0,3,71	./.	1/1:12,1:13:3.01:47,3,0	0/0:13,0:13:9.03:0,9,213	1/1:6,1:7:3.01:47,3,0	0/1:30,1:31:28.86:29,0,336
chr10	105666523	.	ACT	A	6131.98	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.790;DP=692;FS=3.508;HRun=0;HaplotypeScore=88.6969;InbreedingCoeff=0.9840;MQ=86.93;MQ0=1;MQRankSum=-3.686;QD=39.31;ReadPosRankSum=1.454;VQSLOD=7.0110;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,2166	1/1:0,5:5:15.05:221,15,0	0/0:17,0:17:48.12:0,48,831	0/0:32,0:32:84.25:0,84,1464	0/0:10,0:10:30.10:0,30,547	0/0:15,0:15:45.14:0,45,803	0/0:35,0:35:99:0,99,1813	1/1:2,17:19:51.17:751,51,0	0/0:25,0:25:69.24:0,69,1248	0/0:22,0:22:66.22:0,66,1191	0/0:9,0:9:21.07:0,21,393	0/0:49,0:49:99:0,147,2657	0/0:29,0:29:84.27:0,84,1526	0/0:35,0:35:99:0,102,1814	0/0:27,0:27:78.24:0,78,1373	0/0:20,0:20:57.11:0,57,931	0/0:26,0:26:78.27:0,78,1452	0/0:40,0:39:99:0,114,2032	1/1:2,19:21:57.15:791,57,0	1/1:1,21:22:60.20:881,60,0	1/1:1,66:66:99:2650,181,0	0/0:18,0:18:45.15:0,45,836	0/0:11,0:11:30.09:0,30,530	0/0:36,0:36:99:0,108,2007	0/0:21,0:21:63.22:0,63,1172	0/0:14,0:14:42.14:0,42,759	1/1:0,22:22:57.19:839,57,0	0/0:3,0:3:9.03:0,9,168
chr10	105674692	.	TAAACAAAC	T	3745.56	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.520;DP=727;FS=5.228;HRun=0;HaplotypeScore=186.6569;InbreedingCoeff=0.9515;MQ=61.79;MQ0=1;MQRankSum=-8.832;QD=29.73;ReadPosRankSum=0.639;VQSLOD=2.8088;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:91.19:0,91,3562	1/1:4,7:11:21.07:526,21,0	0/0:21,0:19:18.06:0,18,590	0/0:20,0:16:6.02:0,6,191	0/0:26,0:26:60.19:0,60,2265	0/0:8,0:19:29.99:0,30,299	0/0:14,0:21:20.98:0,21,172	1/1:20,7:27:21.02:348,21,0	0/0:25,0:25:33.11:0,33,1207	0/0:30,0:30:63.22:0,63,2521	0/0:24,0:24:45.15:0,45,1618	0/0:33,0:33:54.19:0,54,2111	0/0:30,0:30:54.19:0,54,2097	0/0:35,0:35:75.26:0,75,3066	0/0:35,0:35:72.25:0,72,2897	0/0:38,0:38:66.20:0,66,2365	0/0:27,0:27:42.60:0,43,1567	0/0:18,0:18:39.13:0,39,1420	1/1:15,6:21:18.06:451,18,0	1/1:8,15:23:42.14:1062,42,0	1/1:10,6:16:6.02:152,6,0	0/0:30,0:30:66.20:0,66,2504	0/0:28,0:28:54.19:0,54,2203	0/0:29,0:29:60.21:0,60,2396	0/0:11,0:23:32.92:0,33,312	0/0:34,0:34:72.25:0,72,2960	1/1:13,15:27:48.16:1207,48,0	0/0:16,0:16:36.12:0,36,1474
chr10	105676574	.	T	TA	953.44	PASS	AB=0.748;AC=9;AF=0.161;AN=56;BaseQRankSum=-3.615;DP=493;FS=6.354;HRun=13;HaplotypeScore=60.6435;InbreedingCoeff=0.2286;MQ=72.27;MQ0=1;MQRankSum=-0.515;QD=6.67;ReadPosRankSum=-2.556;VQSLOD=1.6210;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:53.23:0,53,359	0/1:1,3:5:15.50:45,0,16	0/0:27,0:19:16.27:0,16,84	0/0:5,0:4:3.14:0,3,11	0/0:18,0:20:40.67:0,41,273	0/0:21,0:22:54.56:0,55,358	0/0:14,0:14:35.67:0,36,246	0/1:19,16:35:14.58:310,0,15	0/0:12,0:13:25.79:0,26,169	0/0:24,0:24:19.25:0,19,262	0/0:16,1:18:3.79:0,4,161	0/0:15,0:18:22.80:0,23,150	0/0:12,0:13:13.40:0,13,137	0/0:12,0:14:31.70:0,32,208	0/0:19,0:19:44.52:0,45,305	0/0:18,0:22:47.60:0,48,298	0/0:26,1:31:36.75:0,37,364	0/1:13,1:18:1.91:2,0,100	1/1:4,9:13:23.96:210,24,0	0/1:7,13:21:3.65:241,0,4	0/1:6,5:11:43.73:66,0,44	0/0:5,0:6:13.91:0,14,87	0/0:16,0:17:31.74:0,32,211	0/0:8,0:8:22.04:0,22,145	0/1:9,0:13:1.05:1,0,105	0/0:19,0:21:39.67:0,40,257	0/1:14,10:26:2.56:214,0,3	0/0:9,0:10:22.77:0,23,144
chr10	105678384	.	AT	A	688.93	PASS	AB=0.830;AC=15;AF=0.268;AN=56;BaseQRankSum=5.895;DP=505;FS=3.599;HRun=14;HaplotypeScore=60.4816;InbreedingCoeff=0.3901;MQ=73.06;MQ0=9;MQRankSum=-0.029;QD=3.74;ReadPosRankSum=-0.167;VQSLOD=0.3987;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:22:45.47:0,45,425	1/1:2,7:11:21.92:135,22,0	0/0:27,0:17:10.86:0,11,93	0/0:22,0:12:11.85:0,12,84	0/0:17,1:19:41.87:0,42,372	0/1:12,2:15:12.10:12,0,203	0/0:20,0:21:50.64:0,51,422	0/1:13,6:19:4.08:99,0,4	0/1:17,2:19:12.91:13,0,304	0/0:13,1:14:11.55:0,12,220	0/0:13,0:12:26.02:0,26,214	0/1:21,2:22:4.61:5,0,377	0/0:12,0:12:5.91:0,6,173	0/0:19,0:18:15.49:0,15,278	0/0:28,1:29:57.42:0,57,654	0/0:19,1:19:24.34:0,24,357	0/0:22,1:24:22.30:0,22,420	0/1:16,2:18:5.71:6,0,205	1/1:11,6:17:19.74:127,20,0	1/1:1,10:12:28.66:183,29,0	1/1:0,8:9:22.87:150,23,0	0/0:15,0:15:38.78:0,39,329	0/0:11,0:11:26.99:0,27,243	0/0:15,2:17:2.13:0,2,330	0/0:17,1:19:27.08:0,27,361	0/1:20,3:22:13.70:14,0,314	0/1:6,7:14:9.44:121,0,9	0/0:14,0:13:24.01:0,24,216
chr10	105682814	.	TTG	T	252.28	PASS	AB=0.928;AC=25;AF=0.521;AN=48;BaseQRankSum=5.451;DP=569;FS=5.751;HRun=0;HaplotypeScore=83.5139;InbreedingCoeff=0.0518;MQ=78.84;MQ0=17;MQRankSum=-1.328;QD=0.68;ReadPosRankSum=1.720;VQSLOD=0.7955;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:18.95:0,19,200	1/1:5,0:8:5.68:28,6,0	./.	./.	0/0:13,0:13:13.79:0,14,156	1/1:18,0:21:2.84:14,3,0	1/1:19,0:25:2.84:14,3,0	0/1:23,0:22:0:0,0,0	0/1:16,4:20:31.42:31,0,115	0/1:15,0:15:3.84:4,0,166	0/0:14,0:14:5.99:0,6,65	0/0:25,0:25:14.95:0,15,166	0/1:17,0:17:18.19:18,0,34	0/1:15,4:19:23.30:23,0,78	1/1:17,0:20:10.56:48,11,0	0/0:13,0:12:6.02:0,6,89	0/1:29,6:34:46.03:46,0,264	0/1:17,3:19:17.35:17,0,134	./.	./.	1/1:32,0:35:5.68:28,6,0	0/1:25,0:25:5.35:5,0,158	0/0:12,0:10:6.02:0,6,83	0/1:24,2:26:5.26:5,0,299	1/1:6,0:9:5.68:28,6,0	0/1:18,0:18:7.73:8,0,78	1/1:16,0:19:14.77:76,15,0	0/1:10,0:9:7.91:8,0,20
chr10	105685090	.	GACAC	G	417.64	PASS	AB=0.807;AC=6;AF=0.107;AN=56;BaseQRankSum=2.773;DP=596;FS=0.943;HRun=0;HaplotypeScore=110.7039;InbreedingCoeff=0.1979;MQ=56.83;MQ0=3;MQRankSum=1.732;QD=4.54;ReadPosRankSum=0.084;VQSLOD=2.3560;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,1:40:9.78:0,10,958	0/0:6,0:6:5.97:0,6,91	0/0:26,0:12:3.87:0,4,25	0/0:24,0:18:12.84:0,13,123	0/1:24,1:25:32.87:33,0,266	0/1:11,4:17:3.33:67,0,3	0/1:11,10:21:43.51:301,0,44	0/0:22,0:22:21.06:0,21,366	0/0:16,0:21:32.32:0,32,584	0/0:19,0:19:31.65:0,32,417	0/0:11,0:11:20.58:0,21,305	0/0:30,0:32:53.89:0,54,1114	0/0:15,0:16:29.79:0,30,547	0/1:13,1:17:17.77:18,0,440	0/0:26,0:29:59.66:0,60,1194	0/0:29,1:30:9.80:0,10,1083	0/0:14,0:30:41.83:0,42,668	0/0:11,0:22:22.03:0,22,311	0/0:13,0:13:12.04:0,12,214	0/0:10,0:14:3.01:0,3,52	0/0:34,0:33:14.77:0,15,234	0/0:14,0:15:23.56:0,24,508	0/0:8,0:9:11.78:0,12,177	0/0:31,1:35:4.20:0,4,1090	1/1:9,2:12:9.02:123,9,0	0/0:18,0:18:24.03:0,24,376	0/0:10,0:24:11.37:0,11,188	0/0:12,0:12:17.93:0,18,293
chr10	105690519	.	TG	T	1193.58	PASS	AB=0.911;AC=19;AF=0.339;AN=56;BaseQRankSum=5.385;DP=557;FS=8.367;HRun=11;HaplotypeScore=70.4049;InbreedingCoeff=0.2909;MQ=74.98;MQ0=0;MQRankSum=-1.345;QD=4.32;ReadPosRankSum=-0.159;VQSLOD=0.6705;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,2:26:13.18:13,0,264	0/0:10,0:10:15.01:0,15,145	0/0:17,0:16:8.78:0,9,148	0/0:13,0:13:7:0,7,98	0/0:20,0:20:15.04:0,15,160	0/0:25,0:25:37.34:0,37,386	0/1:21,3:25:35.31:35,0,271	1/1:6,13:19:29.94:246,30,0	0/0:25,0:25:48.57:0,49,502	0/1:14,6:20:70.11:70,0,126	0/0:13,0:13:6.02:0,6,64	0/0:21,0:21:33.06:0,33,337	0/0:17,0:18:34.45:0,34,378	0/1:22,1:23:0.09:0,0,381	0/0:24,0:24:42.08:0,42,429	0/0:25,0:25:54.12:0,54,568	0/1:26,3:29:20.50:21,0,424	0/1:18,2:20:7.18:7,0,342	1/1:6,9:15:26.95:220,27,0	1/1:14,4:18:14.94:123,15,0	1/1:14,14:28:44.91:369,45,0	0/0:19,0:20:24.02:0,24,254	0/0:14,0:14:16.20:0,16,165	0/0:35,1:36:26.41:0,26,629	0/1:15,2:17:34.86:35,0,100	0/1:14,1:16:29.49:29,0,101	1/1:6,6:12:23.97:197,24,0	0/1:8,0:8:12.62:13,0,67
chr10	105690576	.	GA	G	4225.83	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.357;DP=567;FS=0.376;HRun=2;HaplotypeScore=62.5098;InbreedingCoeff=0.9991;MQ=91.64;MQ0=0;MQRankSum=-3.327;QD=32.51;ReadPosRankSum=-2.205;VQSLOD=3.9234;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.22:0,69,1012	1/1:0,11:11:30.10:385,30,0	0/0:28,0:28:62.30:0,62,879	0/0:30,0:30:72.33:0,72,1109	0/0:12,0:12:36.12:0,36,538	0/0:21,0:21:60.19:0,60,879	0/0:28,0:28:81.26:0,81,1193	1/1:3,25:28:75.21:933,75,0	0/0:23,0:23:69.23:0,69,1015	0/0:15,0:15:42.08:0,42,629	0/0:10,0:10:30.09:0,30,431	0/0:26,0:26:78.15:0,78,1089	0/0:12,0:12:33.10:0,33,476	0/0:18,0:18:54.17:0,54,786	0/0:23,0:23:69.23:0,69,1030	0/0:22,0:22:66.21:0,66,952	0/0:33,0:33:99:0,99,1483	0/0:23,0:23:69.22:0,69,1012	1/1:1,16:17:51.13:634,51,0	1/1:2,14:16:36.07:434,36,0	1/1:2,38:40:96.16:1189,96,0	0/0:8,0:8:24.08:0,24,351	0/0:18,0:18:54.18:0,54,806	0/0:30,0:30:90.22:0,90,1298	0/0:10,0:10:30.06:0,30,391	0/0:14,0:14:42.13:0,42,593	1/1:2,16:18:54.10:650,54,0	0/0:10,0:10:30.08:0,30,425
chr10	105694960	.	TC	T	6587.89	PASS	AB=1.000;AC=54;AF=0.964;AN=56;BaseQRankSum=5.347;DP=574;FS=4.694;HRun=4;HaplotypeScore=91.0293;InbreedingCoeff=0.0175;MQ=56.35;MQ0=23;MQRankSum=-1.835;QD=11.48;ReadPosRankSum=6.319;VQSLOD=2.2808;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:34:78.81:457,79,0	1/1:8,0:7:20.50:121,21,0	1/1:3,0:1:2.96:19,3,0	0/1:5,0:4:10.09:10,0,15	1/1:24,0:16:29.32:188,29,0	1/1:18,0:15:34.95:198,35,0	1/1:31,0:25:44.06:363,44,0	1/1:11,0:9:17.47:106,17,0	1/1:21,0:19:49.54:284,50,0	1/1:19,0:17:42.60:220,43,0	1/1:6,0:3:5.85:34,6,0	1/1:41,0:37:97.27:560,97,0	1/1:26,0:18:52.42:300,52,0	1/1:35,0:25:36.40:311,36,0	1/1:25,0:23:33.76:285,34,0	1/1:22,0:21:61.19:351,61,0	1/1:25,0:21:30.80:297,31,0	1/1:25,0:23:55.87:338,56,0	1/1:6,6:8:13.90:99,14,0	1/1:10,0:8:20.38:115,20,0	1/1:41,0:41:72.46:519,72,0	1/1:26,0:22:46.85:282,47,0	1/1:7,0:4:5.79:32,6,0	1/1:26,0:25:64.14:365,64,0	0/1:17,0:16:10.96:141,0,11	1/1:22,0:16:40.31:219,40,0	1/1:20,0:17:46.74:270,47,0	1/1:7,0:7:17.59:106,18,0
chr10	105696441	.	TCACACACACACACACACACACACACACA	T	607.28	PASS	AB=1.000;AC=9;AF=0.173;AN=52;BaseQRankSum=1.593;DP=509;FS=6.823;HRun=0;HaplotypeScore=299.9772;InbreedingCoeff=0.6646;MQ=72.58;MQ0=13;MQRankSum=0.306;QD=7.79;ReadPosRankSum=-1.422;VQSLOD=1.2858;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:35.98:0,36,3239	./.	0/0:26,0:21:9.03:0,9,302	0/0:36,0:26:12.03:0,12,299	0/0:13,0:13:15.05:0,15,1162	0/0:18,0:18:27.09:0,27,2826	0/0:25,0:24:34.15:0,34,2767	0/1:15,0:15:2.70:43,0,3	0/0:13,0:12:18.06:0,18,1899	0/0:13,0:11:24.07:0,24,1662	0/0:6,0:6:3.01:0,3,65	0/0:21,0:21:33.11:0,33,3263	0/0:16,0:14:29.60:0,30,2077	0/0:25,0:25:45.63:0,46,4944	0/0:17,0:17:27.09:0,27,2292	0/0:12,0:11:15.05:0,15,1374	0/0:29,0:29:55.20:0,55,4862	0/0:18,0:25:42.55:0,43,3709	1/1:16,4:18:9.01:341,9,0	./.	1/1:26,0:25:8.39:131,8,0	0/0:10,0:10:18.06:0,18,1422	1/1:7,0:7:0.89:2,1,0	0/0:34,0:36:63.19:0,63,6113	0/0:10,0:10:6.02:0,6,703	0/0:23,0:23:39.13:0,39,3179	1/1:6,4:10:2.14:215,2,0	0/0:6,0:6:15.05:0,15,1158
chr10	105696655	.	GCA	G	905.40	PASS	AB=0.925;AC=28;AF=0.560;AN=50;BaseQRankSum=3.003;DP=605;FS=8.364;HRun=0;HaplotypeScore=84.3722;InbreedingCoeff=-0.2410;MQ=56.83;MQ0=13;MQRankSum=1.030;QD=1.78;ReadPosRankSum=-1.467;VQSLOD=0.6008;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,2:35:99:157,0,198	1/1:7,0:8:2.92:24,3,0	./.	./.	0/1:16,0:17:25.49:25,0,53	1/1:13,1:15:8.98:84,9,0	1/1:29,1:31:17.66:115,18,0	./.	0/1:25,0:25:25.36:25,0,200	0/1:19,0:19:5.98:6,0,86	0/1:12,0:12:12.68:13,0,32	0/0:23,0:23:12.04:0,12,176	0/1:22,0:21:15.30:15,0,92	0/1:29,1:30:27.21:27,0,190	0/1:24,0:25:62.49:62,0,148	0/1:20,3:23:17.50:17,0,129	0/1:33,9:41:77.99:78,0,440	0/1:27,7:32:24.83:25,0,369	1/1:15,0:17:8.62:45,9,0	1/1:13,0:14:5.82:33,6,0	1/1:45,0:45:14.56:87,15,0	0/1:9,1:9:23.23:23,0,38	0/1:10,4:14:52.41:52,0,56	0/1:50,4:53:99:132,0,498	0/0:14,4:18:3.01:0,3,32	0/0:19,0:19:12.03:0,12,141	1/1:4,0:7:2.84:14,3,0	0/0:4,0:4:8.98:0,9,100
chr10	105696957	.	A	AAAC	3531.43	PASS	AB=0.592;AC=11;AF=0.196;AN=56;BaseQRankSum=-12.100;DP=737;FS=13.322;HRun=0;HaplotypeScore=110.4268;InbreedingCoeff=0.8892;MQ=64.47;MQ0=4;MQRankSum=1.604;QD=26.16;ReadPosRankSum=-0.154;VQSLOD=2.9884;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:66.15:0,66,850	1/1:2,8:10:11.83:236,12,0	0/0:24,0:17:8.94:0,9,90	0/0:15,0:13:5.95:0,6,53	0/0:22,0:22:45.10:0,45,580	0/0:6,0:25:41.28:0,41,282	0/0:7,0:28:38.69:0,39,272	1/1:15,12:29:41.97:569,42,0	0/0:30,0:30:69.22:0,69,930	0/0:39,0:38:78.19:0,78,999	0/0:15,0:15:36.10:0,36,461	0/0:45,0:45:96.29:0,96,1255	0/0:25,0:25:60.17:0,60,789	0/0:24,0:24:48.12:0,48,595	0/0:32,0:32:57.19:0,57,780	0/0:36,0:36:78.22:0,78,1009	0/0:45,0:45:90.25:0,90,1165	0/0:36,0:36:66.07:0,66,797	1/1:11,8:17:24.08:472,24,0	1/1:4,14:18:38.56:702,39,0	1/1:11,19:30:45.15:885,45,0	0/0:16,0:15:39.11:0,39,505	0/0:16,0:16:33.07:0,33,416	0/0:31,0:31:63.16:0,63,826	0/0:8,0:25:44.26:0,44,304	0/0:31,0:31:69.14:0,69,853	0/1:9,20:29:2.21:668,0,2	0/0:7,0:7:18.06:0,18,247
chr10	105702659	.	AAAG	A	843.42	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-1.217;DP=357;FS=0.000;HRun=0;HaplotypeScore=48.6234;InbreedingCoeff=0.7324;MQ=45.55;MQ0=20;MQRankSum=-2.493;QD=10.54;ReadPosRankSum=-1.694;VQSLOD=2.5268;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:10:15.02:0,15,200	1/1:3,0:3:5.77:32,6,0	0/0:26,0:3:8.98:0,9,84	0/0:14,0:4:2.88:0,3,15	0/0:15,0:14:14.99:0,15,131	0/0:22,0:22:25.91:0,26,423	0/0:6,0:6:14.96:0,15,145	1/1:31,0:27:38.95:326,39,0	0/0:7,0:6:3.22:0,3,112	0/0:12,0:11:16.10:0,16,173	0/0:9,0:8:2.99:0,3,23	0/0:20,0:20:35.92:0,36,394	0/0:6,0:6:8.83:0,9,62	0/0:6,0:6:13.84:0,14,166	0/0:8,0:7:4.82:0,5,96	0/0:14,0:14:29.98:0,30,284	0/0:23,0:20:32.94:0,33,419	0/0:18,0:18:26.77:0,27,323	1/1:18,0:14:17.95:150,18,0	1/1:4,4:8:17.88:167,18,0	1/1:5,0:5:3:26,3,0	0/0:7,0:7:8.98:0,9,73	0/0:10,0:10:11.90:0,12,87	0/0:2,0:2:2.82:0,3,23	0/0:12,0:12:17.94:0,18,177	0/0:12,0:11:15.01:0,15,157	1/1:15,0:13:38.82:311,39,0	0/0:16,0:16:30.87:0,31,410
chr10	105702660	.	AAG	A	933.60	PASS	AB=0.944;AC=14;AF=0.250;AN=56;BaseQRankSum=-1.213;DP=346;FS=0.000;HRun=0;HaplotypeScore=42.2806;InbreedingCoeff=0.6481;MQ=47.00;MQ0=18;MQRankSum=-3.167;QD=9.83;ReadPosRankSum=-2.036;VQSLOD=2.2758;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:9:14.56:0,15,155	1/1:0,3:3:5.98:52,6,0	0/0:26,0:3:8.82:0,9,66	0/0:14,0:4:5.67:0,6,28	0/0:13,0:13:15.11:0,15,96	0/0:20,0:20:20.66:0,21,332	0/0:6,0:6:14.17:0,14,119	1/1:30,0:26:49.23:391,49,0	0/1:7,0:6:6.71:7,0,97	0/0:13,0:12:18.59:0,19,183	0/0:8,0:7:2.01:0,2,22	0/0:21,0:21:38.26:0,38,351	0/0:5,0:5:8.33:0,8,59	0/0:6,0:6:13.23:0,13,123	0/1:7,1:7:7.72:8,0,79	0/0:15,0:15:34.64:0,35,288	0/0:22,0:20:32.89:0,33,341	0/0:16,0:16:26.04:0,26,239	1/1:19,0:15:18.43:216,18,0	1/1:8,0:8:17.75:136,18,0	1/1:5,0:5:3:26,3,0	0/0:7,0:7:8.20:0,8,72	0/0:10,0:10:11.51:0,12,86	0/0:2,0:2:2.82:0,3,23	0/0:10,0:10:21.23:0,21,171	0/0:11,0:10:20.77:0,21,199	1/1:15,0:13:37.87:272,38,0	0/0:16,0:16:30.58:0,31,344
chr10	105702661	.	AG	A	861.24	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=0.873;DP=310;FS=2.108;HRun=1;HaplotypeScore=34.0093;InbreedingCoeff=0.6984;MQ=51.04;MQ0=18;MQRankSum=-3.923;QD=12.13;ReadPosRankSum=-2.399;VQSLOD=1.2301;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:7:14.72:0,15,123	1/1:3,0:3:5.92:39,6,0	0/0:26,0:3:8.02:0,8,39	0/0:15,0:5:8.78:0,9,53	0/0:9,0:9:6.02:0,6,62	0/0:16,0:16:18.29:0,18,256	0/0:6,0:6:8.27:0,8,95	1/1:25,0:22:49.70:393,50,0	0/0:7,0:6:6.15:0,6,114	0/0:11,0:11:17.20:0,17,164	0/0:4,1:4:1.69:0,2,21	0/0:20,0:20:36.22:0,36,276	0/0:5,0:5:3.90:0,4,66	0/0:6,0:6:6.17:0,6,79	0/0:8,0:7:4.67:0,5,75	0/0:13,1:14:32.92:0,33,248	0/0:18,0:17:32.74:0,33,267	0/0:16,0:16:24.29:0,24,190	1/1:17,0:13:18.24:215,18,0	1/1:7,1:8:16.89:98,17,0	1/1:3,0:3:3:26,3,0	0/0:5,0:5:7.72:0,8,71	0/0:9,0:9:10.62:0,11,85	0/0:2,0:2:2.82:0,3,23	0/0:10,0:10:14.45:0,14,128	0/0:10,0:9:20.21:0,20,189	1/1:13,1:13:34.86:260,35,0	0/0:13,0:13:29.69:0,30,270
chr10	105703979	.	CCA	C	348.41	PASS	AB=0.941;AC=16;AF=0.333;AN=48;BaseQRankSum=0.127;DP=377;FS=1.805;HRun=0;HaplotypeScore=56.0646;InbreedingCoeff=0.0084;MQ=69.92;MQ0=10;MQRankSum=0.000;QD=1.87;ReadPosRankSum=1.167;VQSLOD=1.4347;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:21:70.07:70,0,130	0/0:5,0:5:0.47:0,0,1	./.	./.	0/0:10,0:10:8.52:0,9,92	1/1:9,0:8:2.95:19,3,0	1/1:20,2:22:11.95:110,12,0	0/0:17,0:17:2.98:0,3,22	0/1:10,2:11:29.54:30,0,36	0/0:10,0:11:6.76:0,7,43	0/0:4,0:4:6.01:0,6,72	0/0:25,0:25:6.85:0,7,148	0/1:6,0:6:26.43:29,0,26	0/0:10,0:9:8.95:0,9,87	0/0:16,0:17:0.98:0,1,102	0/1:14,0:14:36.30:36,0,76	0/1:24,5:29:25.02:25,0,299	0/1:22,1:24:13.77:14,0,277	1/1:10,0:10:5.70:39,6,0	0/0:7,0:7:2.04:0,2,6	0/0:17,0:15:5.68:0,6,37	./.	./.	0/0:23,0:25:36.02:0,36,349	1/1:9,0:9:8.99:84,9,0	0/1:15,0:15:12.76:13,0,116	0/1:14,0:14:14.28:23,0,14	0/0:2,0:2:3.01:0,3,44
chr10	105704027	.	A	ACGCG	597.76	PASS	AB=0.925;AC=12;AF=0.222;AN=54;BaseQRankSum=6.426;DP=471;FS=1.386;HRun=0;HaplotypeScore=88.0609;InbreedingCoeff=0.3324;MQ=58.67;MQ0=20;MQRankSum=-1.833;QD=3.91;ReadPosRankSum=-3.181;VQSLOD=0.4208;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:8.93:0,9,894	1/1:6,0:6:4.29:13,4,0	0/0:21,0:8:21.03:0,21,339	0/1:21,0:8:1.81:2,0,179	0/0:9,0:9:14.84:0,15,243	0/0:15,0:13:14.32:0,14,445	0/1:15,0:15:13.62:14,0,340	0/1:8,0:7:61.35:67,0,61	0/0:12,0:11:20.90:0,21,374	0/0:14,0:14:37.34:0,37,578	0/0:7,0:6:12.02:0,12,176	0/0:29,0:28:66.11:0,66,907	0/1:10,0:10:10.68:11,0,284	0/0:12,0:9:27.02:0,27,410	0/0:11,0:11:21.06:0,21,332	0/0:14,0:14:17.90:0,18,603	0/0:37,0:37:85.56:0,86,1324	0/0:35,0:35:92.92:0,93,1390	1/1:15,0:14:5.83:204,6,0	./.	1/1:26,0:21:20.87:278,21,0	0/0:6,0:5:8.99:0,9,112	0/0:11,0:11:11.83:0,12,185	0/1:32,0:31:19.42:19,0,543	0/0:15,0:15:35.13:0,35,538	0/0:30,0:28:39.60:0,40,1016	0/1:6,12:19:3.50:139,0,4	0/0:5,0:5:15.05:0,15,249
chr10	105704629	.	CCAGTCAGT	C	1479.78	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=8.251;DP=722;FS=2.608;HRun=0;HaplotypeScore=172.0975;InbreedingCoeff=0.9139;MQ=63.48;MQ0=9;MQRankSum=-4.435;QD=9.87;ReadPosRankSum=-2.559;VQSLOD=1.8839;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:75.26:0,75,2846	1/1:4,7:11:18.06:378,18,0	./.	0/0:25,0:14:3.01:0,3,40	0/0:19,0:19:18.06:0,18,707	0/0:18,0:18:27.08:0,27,990	0/0:42,0:42:66.23:0,66,2483	1/1:28,0:27:9.03:214,9,0	0/0:21,0:21:48.16:0,48,1962	0/0:16,0:16:30.10:0,30,1229	0/0:13,0:13:9.03:0,9,368	0/0:26,0:26:39.12:0,39,1497	0/0:28,0:28:45.15:0,45,1806	0/0:22,0:22:30.10:0,30,1153	0/0:43,0:43:87.30:0,87,3390	0/0:47,0:47:57.20:0,57,2252	0/0:38,0:39:60.19:0,60,2357	0/0:23,0:23:51.18:0,51,2030	1/1:16,4:19:11.96:270,12,0	1/1:13,7:19:11.96:190,12,0	1/1:28,10:38:11.87:80,12,0	0/0:17,0:17:30.09:0,30,1044	0/0:11,0:11:18.06:0,18,683	0/0:40,0:40:69.24:0,69,2698	0/0:11,0:11:18.06:0,18,729	0/0:24,0:24:48.16:0,48,1600	1/1:20,13:33:21.07:523,21,0	0/0:19,0:19:27.09:0,27,1097
chr10	105707831	.	A	ATT	991.36	PASS	AB=0.758;AC=9;AF=0.161;AN=56;BaseQRankSum=0.586;DP=545;FS=0.517;HRun=15;HaplotypeScore=83.9387;InbreedingCoeff=0.6330;MQ=73.54;MQ0=3;MQRankSum=0.156;QD=8.77;ReadPosRankSum=-2.038;VQSLOD=1.1687;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:45:41.25:0,41,481	1/1:1,3:8:23.41:235,23,0	0/0:30,0:14:23.03:0,23,163	0/0:22,0:18:16.94:0,17,126	0/0:12,0:16:19.76:0,20,166	0/0:17,0:17:38.62:0,39,306	0/0:17,0:21:34.38:0,34,283	1/1:19,4:23:17.88:186,18,0	0/0:17,0:19:23.16:0,23,216	0/0:17,0:21:31.83:0,32,263	0/0:9,0:10:17.42:0,17,130	0/0:16,0:17:22.71:0,23,214	0/0:12,0:14:19.91:0,20,136	0/0:10,0:13:17.54:0,18,169	0/0:21,0:22:50.40:0,50,390	0/0:23,0:26:31.92:0,32,319	0/0:30,0:33:18.21:0,18,428	0/0:25,0:28:50.96:0,51,390	0/1:15,4:24:37:200,0,37	0/1:15,1:16:50.35:90,0,50	1/1:8,9:21:26.54:257,27,0	0/0:11,0:13:16.12:0,16,115	0/0:15,0:15:17.66:0,18,181	0/0:9,0:11:17.76:0,18,181	0/0:8,0:11:8.36:0,8,137	0/0:16,0:17:38.61:0,39,295	0/1:7,12:20:2.02:181,0,2	0/0:7,0:8:23.54:0,24,168
chr10	105708035	.	G	GA	821.22	PASS	AB=0.881;AC=17;AF=0.304;AN=56;BaseQRankSum=-1.322;DP=485;FS=1.945;HRun=14;HaplotypeScore=72.4552;InbreedingCoeff=0.3866;MQ=65.25;MQ0=10;MQRankSum=-0.403;QD=3.86;ReadPosRankSum=-3.007;VQSLOD=0.3546;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,1:41:38.58:0,39,353	1/1:1,0:1:2.99:23,3,0	0/0:38,2:12:6.34:0,6,56	0/1:35,1:24:20.43:26,0,20	0/0:13,1:13:17.26:0,17,111	0/1:10,1:12:1.66:2,0,102	0/0:11,0:15:25.88:0,26,138	1/1:9,14:20:7.57:289,8,0	0/1:9,3:12:34.94:35,0,59	0/1:11,1:11:17.28:19,0,17	0/0:9,0:9:8.80:0,9,57	0/0:15,0:15:17.67:0,18,101	0/0:12,0:12:16.26:0,16,77	0/0:12,1:13:17.01:0,17,118	0/1:14,1:16:0.85:1,0,107	0/0:10,0:11:16.68:0,17,102	0/0:22,0:27:47.85:0,48,274	0/0:18,0:18:34.70:0,35,217	1/1:9,3:14:20.38:135,20,0	1/1:7,12:21:22.84:200,23,0	0/1:9,9:18:17.54:111,0,18	0/0:11,0:11:13.89:0,14,83	0/0:10,0:10:11.54:0,12,75	0/0:19,2:21:14.93:0,15,222	0/0:8,0:9:11.37:0,11,66	0/1:22,1:24:0.01:0,0,158	1/1:6,12:17:17.92:149,18,0	0/0:4,1:4:2.89:0,3,18
chr10	105709048	.	TTTTTGTTTTG	T	4449.03	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=12.581;DP=603;FS=1.051;HRun=0;HaplotypeScore=173.4746;InbreedingCoeff=0.8743;MQ=66.43;MQ0=2;MQRankSum=-8.033;QD=34.22;ReadPosRankSum=-2.494;VQSLOD=4.0022;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:87.28:0,87,3979	1/1:4,5:9:8.99:201,9,0	0/1:17,0:11:10.90:11,0,250	0/0:20,0:18:17.07:0,17,704	0/0:18,0:18:33.11:0,33,1619	0/0:29,0:29:63.22:0,63,2925	0/0:23,0:23:54.17:0,54,2229	1/1:17,15:32:41.99:650,42,0	0/0:28,0:28:66.23:0,66,3052	0/0:17,0:17:39.13:0,39,1903	0/0:25,0:25:57.16:0,57,2441	0/0:25,0:25:60.17:0,60,2544	0/0:21,0:21:42.14:0,42,2011	0/0:22,0:22:54.18:0,54,2610	0/0:21,0:21:54.19:0,54,2556	0/0:20,0:20:48.15:0,48,2222	0/0:22,0:22:54.19:0,54,2503	0/0:23,0:23:51.65:0,52,2277	1/1:8,10:18:27:454,27,0	1/1:5,16:21:45.15:1176,45,0	./.	0/0:16,0:16:33.11:0,33,1498	0/0:12,0:12:18.06:0,18,892	0/0:32,0:32:78.27:0,78,3529	0/0:20,0:20:45.15:0,45,2137	0/0:26,0:26:54.18:0,54,2669	1/1:3,30:33:66.23:1958,66,0	0/0:8,0:8:18.06:0,18,845
chr10	105710113	.	TAC	T	272.30	PASS	AB=0.906;AC=13;AF=0.250;AN=52;BaseQRankSum=2.706;DP=618;FS=0.000;HRun=0;HaplotypeScore=85.8510;InbreedingCoeff=-0.3087;MQ=62.22;MQ0=17;MQRankSum=1.108;QD=0.95;ReadPosRankSum=0.178;VQSLOD=1.1115;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,3:33:81.22:81,0,350	0/0:9,0:9:5.92:0,6,53	./.	./.	0/1:22,3:25:3.21:3,0,311	0/1:21,2:23:45.87:46,0,254	0/1:34,1:34:3.18:3,0,360	0/0:23,0:23:18.90:0,19,191	0/0:13,0:13:12.04:0,12,170	0/1:17,0:16:16.05:16,0,82	0/0:13,0:13:12.04:0,12,171	0/1:10,1:12:18.24:18,0,139	0/1:9,6:15:75.50:85,0,75	0/0:21,0:21:33.11:0,33,474	0/1:25,3:28:51.50:51,0,121	0/1:25,0:24:0.04:0,0,401	0/0:24,2:26:2.81:0,3,422	0/1:9,3:12:51.49:51,0,113	0/0:12,0:15:9.15:0,9,64	0/0:20,0:29:14.03:0,14,109	0/0:33,0:33:20.96:0,21,194	0/1:24,2:26:0.19:0,0,384	0/1:17,3:20:36.46:36,0,309	0/0:20,0:20:27.05:0,27,359	0/1:13,1:14:12.22:12,0,227	0/0:22,0:22:21.53:0,22,260	0/0:13,0:19:7.59:0,8,70	0/0:9,0:9:20.96:0,21,264
chr10	105710589	.	A	AAAAACAAAAC	5126.98	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-0.136;DP=379;FS=0.905;HRun=0;HaplotypeScore=112.8931;InbreedingCoeff=0.8963;MQ=89.28;MQ0=0;MQRankSum=-8.880;QD=74.30;ReadPosRankSum=-4.898;VQSLOD=3.9231;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:81.26:0,81,2430	1/1:1,2:3:6.02:301,6,0	0/0:21,0:21:0.98:0,1,186	0/0:17,0:17:26.99:0,27,708	0/0:11,0:11:18.05:0,18,488	0/0:8,0:8:21.07:0,21,645	0/0:13,0:13:36.12:0,36,1067	1/1:16,1:19:27.08:972,27,0	0/0:11,0:11:30.09:0,30,805	0/0:14,0:14:33.11:0,33,994	0/0:10,0:10:27.09:0,27,824	0/0:25,0:25:57.20:0,57,1733	0/0:14,0:14:39.13:0,39,1161	0/0:10,0:10:21.07:0,21,601	0/0:13,0:13:33.10:0,33,950	0/0:15,0:15:45.15:0,45,1388	0/0:15,0:15:39.11:0,39,1122	0/0:8,0:8:15.05:0,15,463	1/1:6,2:6:12.04:447,12,0	1/1:1,8:9:18.06:834,18,0	1/1:12,6:19:30.10:1370,30,0	0/0:15,0:15:30.10:0,30,885	0/0:11,0:11:27.09:0,27,833	0/0:15,0:15:39.13:0,39,1192	0/0:20,0:20:45.15:0,45,1275	0/0:8,0:8:21.07:0,21,648	1/1:3,8:11:24.08:1203,24,0	0/0:2,0:2:6.02:0,6,185
chr10	105712141	.	A	ACCCTCCCCC	3554.16	PASS	AC=32;AF=0.889;AN=36;BaseQRankSum=0.725;DP=129;FS=12.553;HRun=0;HaplotypeScore=50.3571;InbreedingCoeff=0.2439;MQ=29.64;MQ0=67;MQRankSum=-2.383;QD=47.39;ReadPosRankSum=2.314;VQSLOD=1.6841;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:4:3.01:54,3,0	./.	0/0:6,0:1:2.99:0,3,24	0/0:15,0:2:3:0,3,27	1/1:1,0:1:3.01:106,3,0	1/1:6,1:4:9.03:409,9,0	./.	./.	1/1:2,1:3:6.02:275,6,0	1/1:2,0:2:3.01:145,3,0	./.	1/1:6,1:5:15.05:447,15,0	1/1:3,0:1:3.01:105,3,0	1/1:4,2:5:15.05:584,15,0	./.	1/1:1,0:2:6.02:198,6,0	1/1:5,2:3:9.03:289,9,0	1/1:5,2:4:9.03:394,9,0	1/1:6,0:2:6.02:119,6,0	./.	./.	1/1:3,0:3:3.01:131,3,0	1/1:4,0:2:3.01:79,3,0	1/1:3,0:1:3.01:55,3,0	./.	1/1:3,1:2:5.98:165,6,0	./.	./.
chr10	105716274	.	C	CG	5177.50	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-8.107;DP=547;FS=0.373;HRun=2;HaplotypeScore=53.1392;InbreedingCoeff=0.9880;MQ=88.78;MQ0=0;MQRankSum=-0.000;QD=36.98;ReadPosRankSum=-1.198;VQSLOD=4.7249;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,1545	1/1:1,4:5:11.99:172,12,0	0/0:23,0:23:60.17:0,60,712	0/0:22,0:22:59.38:0,59,679	0/0:12,0:12:33.09:0,33,396	0/0:10,0:10:30.05:0,30,354	0/0:24,0:24:69.16:0,69,814	1/1:4,32:36:90.20:1223,90,0	0/0:12,0:12:36.11:0,36,445	0/0:15,0:15:42.10:0,42,500	0/0:10,0:10:21.03:0,21,243	0/0:25,0:25:69.22:0,69,850	0/0:15,0:15:42.13:0,42,519	0/0:13,0:13:39.08:0,39,462	0/0:11,0:11:30.03:0,30,327	0/0:19,0:19:57.11:0,57,654	0/0:27,0:27:72.20:0,72,865	0/0:29,0:29:78.17:0,78,932	1/1:1,18:19:54.10:682,54,0	1/1:1,13:14:39.13:560,39,0	1/1:0,52:52:99:1938,135,0	0/0:8,0:8:21.07:0,21,259	0/0:8,0:8:24.07:0,24,292	0/0:41,0:41:99:0,120,1440	0/0:12,0:12:36.11:0,36,445	0/0:19,0:19:51.13:0,51,598	1/1:0,14:14:42.14:603,42,0	0/0:6,0:6:15.05:0,15,184
chr10	105716765	.	A	AAAAAAC	6080.67	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=0.365;DP=651;FS=0.984;HRun=0;HaplotypeScore=129.2391;InbreedingCoeff=0.9650;MQ=63.39;MQ0=3;MQRankSum=-11.363;QD=29.52;ReadPosRankSum=-5.096;VQSLOD=3.7957;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:75.22:0,75,1452	1/1:7,4:11:12.04:315,12,0	0/0:19,0:18:20.80:0,21,345	0/0:11,0:11:9.02:0,9,129	0/0:25,0:25:51.16:0,51,1002	1/1:9,12:20:21.07:671,21,0	1/1:12,9:23:24.08:722,24,0	1/1:23,0:23:32.93:629,33,0	0/0:23,0:23:39.12:0,39,737	0/0:19,0:19:27.09:0,27,550	0/0:15,0:15:24.07:0,24,450	0/0:21,0:21:41.48:0,41,728	0/0:27,0:27:60.20:0,60,1187	0/0:24,0:24:48.06:0,48,863	0/0:23,0:23:36.07:0,36,655	0/0:30,0:30:72.23:0,72,1380	0/0:26,0:26:42.14:0,42,829	0/0:28,0:28:48.14:0,48,867	1/1:29,2:31:27.44:572,27,0	1/1:12,8:21:33.11:948,33,0	1/1:20,0:20:17.96:341,18,0	0/0:23,0:23:42.12:0,42,785	0/0:20,0:20:45.14:0,45,880	0/0:35,0:34:54.18:0,54,1067	1/1:7,9:20:18.06:478,18,0	0/0:25,0:25:66.18:0,66,1156	1/1:19,15:35:48.16:1404,48,0	0/0:5,0:4:6.02:0,6,122
chr10	105717630	.	A	AT	6139.11	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-14.420;DP=657;FS=8.179;HRun=4;HaplotypeScore=65.7984;InbreedingCoeff=0.9916;MQ=81.58;MQ0=0;MQRankSum=-0.894;QD=37.21;ReadPosRankSum=-0.783;VQSLOD=4.5332;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,138,1564	1/1:1,8:9:24.08:328,24,0	0/0:16,0:16:42.11:0,42,468	0/0:21,0:21:57.14:0,57,628	0/0:17,0:17:42.12:0,42,476	0/0:17,0:17:48.14:0,48,544	0/0:20,0:20:57.16:0,57,646	1/1:0,32:32:96.31:1297,96,0	0/0:15,0:15:33.06:0,33,354	0/0:29,0:29:84.24:0,84,953	0/0:6,0:6:12.03:0,12,136	0/0:23,0:23:60.17:0,60,681	0/0:28,0:28:66.17:0,66,739	0/0:23,0:23:69.17:0,69,763	0/0:26,0:26:72.19:0,72,807	0/0:23,0:23:66.16:0,66,728	0/0:31,0:31:87.25:0,87,985	0/0:23,0:23:69.20:0,69,783	1/1:2,14:16:36.10:475,36,0	1/1:0,18:18:51.08:655,51,0	1/1:1,61:62:99:2421,178,0	0/0:14,0:14:39.11:0,39,442	0/0:8,0:8:18.05:0,18,204	0/0:33,0:33:90.24:0,90,1009	0/0:22,0:22:66.19:0,66,748	0/0:20,0:20:45.12:0,45,510	1/1:2,26:28:72.20:962,72,0	0/0:27,0:27:81.23:0,81,919
chr10	105718827	.	T	TACAC	875.39	PASS	AB=0.991;AC=14;AF=0.280;AN=50;BaseQRankSum=2.340;DP=642;FS=4.486;HRun=0;HaplotypeScore=117.0568;InbreedingCoeff=0.4591;MQ=62.50;MQ0=19;MQRankSum=-1.041;QD=3.87;ReadPosRankSum=-2.438;VQSLOD=1.6947;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:21.02:0,21,280	0/0:7,0:8:3:0,3,28	./.	./.	0/0:11,0:11:6:0,6,71	0/1:14,0:16:18.75:19,0,248	0/0:31,0:31:24.08:0,24,357	1/1:26,0:25:15.50:276,16,0	0/0:19,0:20:23.42:0,23,352	0/1:26,0:26:6.48:6,0,41	0/0:14,0:14:8.47:0,8,137	0/0:24,0:24:1.57:0,2,259	0/0:20,0:23:15.02:0,15,175	0/0:25,0:25:18.04:0,18,234	0/0:27,0:28:42.09:0,42,572	0/1:20,0:20:9.80:10,0,426	1/1:13,10:28:11.78:224,12,0	0/0:23,0:23:27.08:0,27,389	1/1:16,0:16:7.24:98,7,0	./.	1/1:51,0:47:8.49:168,8,0	0/0:17,0:17:12.50:0,12,165	0/0:10,0:10:6.01:0,6,74	0/0:29,0:33:48.15:0,48,706	0/0:19,0:19:15.05:0,15,231	0/1:23,0:23:14.98:15,0,40	1/1:19,0:19:12.51:220,13,0	0/0:28,0:29:9.02:0,9,121
chr10	105720951	.	CTCTTCTGGGGTG	C	5525.86	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.730;DP=625;FS=8.238;HRun=0;HaplotypeScore=194.8789;InbreedingCoeff=0.9769;MQ=56.88;MQ0=22;MQRankSum=-9.376;QD=54.18;ReadPosRankSum=-0.522;VQSLOD=3.6016;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,5780	1/1:0,9:9:24.08:845,24,0	0/0:27,0:6:15.05:0,15,708	0/0:31,0:12:30.10:0,30,1364	0/0:26,0:26:72.25:0,72,4401	0/0:18,0:18:54.17:0,54,2966	0/0:23,0:23:69.19:0,69,3897	1/1:7,12:17:33.10:1112,33,0	0/0:20,0:20:57.20:0,57,3478	0/0:23,0:22:60.20:0,60,3340	0/0:15,0:15:42.14:0,42,2357	0/0:42,0:42:99:0,114,6637	0/0:14,0:14:42.14:0,42,2455	0/0:22,0:22:60.21:0,60,3471	0/0:34,0:34:99:0,99,5598	0/0:8,0:8:24.08:0,24,1363	0/0:35,0:35:99:0,105,5696	0/0:21,0:20:54.18:0,54,3044	1/1:6,10:13:30.09:974,30,0	1/1:6,9:15:18.52:508,19,0	1/1:11,11:21:12.51:452,13,0	0/0:27,0:27:78.27:0,78,4405	0/0:23,0:23:66.23:0,66,3858	0/0:23,0:22:63.22:0,63,3669	0/0:21,0:21:54.19:0,54,3182	0/0:33,0:33:99:0,99,5697	1/1:5,16:20:45.15:1634,45,0	0/0:3,0:3:9.03:0,9,438
chr10	105721191	.	GCA	G	5617.74	PASS	AB=0.912;AC=23;AF=0.411;AN=56;BaseQRankSum=13.261;DP=750;FS=1.875;HRun=0;HaplotypeScore=94.6907;InbreedingCoeff=0.6630;MQ=70.55;MQ0=2;MQRankSum=0.078;QD=14.82;ReadPosRankSum=-0.237;VQSLOD=4.1797;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,2:52:50.95:0,51,1700	1/1:0,11:12:32.93:376,33,0	0/1:32,2:24:30.66:31,0,446	0/0:30,0:21:29.69:0,30,437	0/0:12,0:13:33.10:0,33,506	1/1:5,13:18:30.09:362,30,0	1/1:3,16:21:44.80:498,45,0	1/1:12,14:26:39.11:458,39,0	0/0:15,0:15:33.11:0,33,530	0/0:21,1:22:5.94:0,6,589	0/0:25,0:26:50.92:0,51,884	0/1:30,5:35:84.61:85,0,1192	0/1:24,3:27:3.16:3,0,938	0/1:29,2:32:2.22:2,0,1116	0/0:38,0:38:93.32:0,93,1482	0/0:22,1:23:17.99:0,18,781	0/0:30,0:30:78.27:0,78,1253	0/0:29,0:29:72.25:0,72,1154	1/1:11,14:25:39.08:445,39,0	1/1:2,26:29:66.03:774,66,0	1/1:9,43:54:99:1403,120,0	0/1:24,2:26:21.22:21,0,668	0/0:13,0:13:33.11:0,33,530	0/0:46,0:46:77.10:0,77,1699	1/1:5,19:25:57.01:665,57,0	0/0:25,3:28:20.99:0,21,810	1/1:3,12:15:42.11:494,42,0	0/0:6,0:6:18.06:0,18,259
chr10	105721366	.	G	GA	52.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.723;DP=699;FS=13.881;HRun=8;HaplotypeScore=71.1532;InbreedingCoeff=0.9565;MQ=77.29;MQ0=0;MQRankSum=-0.439;QD=7.51;ReadPosRankSum=-2.646;VQSLOD=-0.1647;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,102,933	1/1:1,6:7:12.04:138,12,0	0/0:33,0:32:46.82:0,47,523	0/0:21,0:21:21.08:0,21,269	0/0:23,0:23:63.03:0,63,576	0/0:27,0:27:78.03:0,78,709	0/0:18,0:18:45:0,45,406	0/0:27,0:27:68.98:0,69,616	0/0:22,0:22:63.03:0,63,576	0/0:27,0:27:75.03:0,75,682	0/0:23,0:23:54.01:0,54,493	0/0:35,0:35:96.04:0,96,878	0/0:21,0:21:48:0,48,433	0/0:23,0:23:60.01:0,60,543	0/0:29,0:29:69.01:0,69,626	0/0:25,0:25:66.03:0,66,604	0/0:32,0:32:86.96:0,87,781	0/0:20,0:20:54.03:0,54,494	0/0:20,0:20:48:0,48,429	0/0:19,0:19:54.03:0,54,494	0/0:19,0:19:48.02:0,48,439	0/0:35,0:35:96.03:0,96,873	0/0:24,0:24:51.91:0,52,468	0/0:42,0:41:99:0,117,1070	0/0:23,0:23:53.09:0,53,489	0/0:26,0:26:66.03:0,66,604	0/0:30,0:29:78.01:0,78,705	0/0:6,0:6:17.98:0,18,158
chr10	105723329	.	GC	G	3729.46	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.367;DP=570;FS=0.401;HRun=4;HaplotypeScore=56.9472;InbreedingCoeff=0.9860;MQ=70.32;MQ0=3;MQRankSum=-3.760;QD=29.14;ReadPosRankSum=-0.416;VQSLOD=3.1241;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,111,1446	1/1:0,4:4:9.03:108,9,0	0/0:21,0:20:54.14:0,54,721	0/0:23,0:23:63.04:0,63,782	0/0:27,0:27:72.19:0,72,965	0/0:20,0:20:54.17:0,54,739	0/0:25,0:25:75.21:0,75,995	1/1:4,27:30:81.23:957,81,0	0/0:17,0:17:48.16:0,48,672	0/0:19,0:19:51.12:0,51,624	0/0:7,0:7:18.02:0,18,210	0/0:20,0:20:60.15:0,60,802	0/0:17,0:16:45.15:0,45,628	0/0:22,0:22:66.22:0,66,923	0/0:19,0:19:54.17:0,54,739	0/0:23,0:23:66.22:0,66,923	0/0:28,0:28:81.27:0,81,1133	0/0:27,0:27:81.25:0,81,1116	1/1:0,17:17:51.16:612,51,0	1/1:0,16:16:33.10:396,33,0	1/1:4,30:33:75.23:900,75,0	0/0:15,0:15:39.10:0,39,505	0/0:11,0:11:27.04:0,27,340	0/0:15,0:15:45.15:0,45,630	0/0:14,0:14:42.13:0,42,571	0/0:20,0:20:54.14:0,54,692	1/1:1,25:26:63.19:756,63,0	0/0:10,0:10:27.09:0,27,378
chr10	105728438	.	TA	T	1404.67	PASS	AB=0.709;AC=10;AF=0.179;AN=56;BaseQRankSum=5.104;DP=631;FS=10.901;HRun=13;HaplotypeScore=77.0658;InbreedingCoeff=0.5326;MQ=70.10;MQ0=1;MQRankSum=1.570;QD=10.33;ReadPosRankSum=0.160;VQSLOD=2.0479;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,1:15:11.12:0,11,260	0/1:2,3:7:13.16:61,0,13	0/1:23,0:10:7.66:8,0,60	0/0:24,0:16:17.30:0,17,126	0/0:34,1:35:68:0,68,797	0/0:25,0:25:55.26:0,55,666	0/0:10,1:11:8.13:0,8,236	1/1:11,14:26:64.62:461,65,0	0/0:15,0:15:33.04:0,33,316	0/0:27,2:30:10.10:0,10,405	0/0:19,2:21:6.75:0,7,339	0/0:17,0:17:17.10:0,17,309	0/0:21,0:21:57.83:0,58,531	0/0:25,0:26:45.47:0,45,531	0/0:14,0:14:17.30:0,17,302	0/0:16,0:16:39.03:0,39,365	0/0:34,2:36:17.94:0,18,590	0/0:36,3:39:53.37:0,53,804	0/1:11,13:24:1.72:312,0,2	0/1:8,12:23:7.69:240,0,8	1/1:0,10:10:20.88:153,21,0	0/0:20,1:22:27.53:0,28,447	0/0:21,1:24:34.12:0,34,480	0/0:26,2:29:27.42:0,27,603	0/0:24,0:24:60.01:0,60,562	0/0:29,3:33:21.21:0,21,648	1/1:10,12:23:46.70:328,47,0	0/0:16,2:18:1.22:0,1,319
chr10	105728492	.	GTTGAAAAAAAAAAGT	G	8164.50	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.778;DP=552;FS=1.565;HRun=0;HaplotypeScore=237.4055;InbreedingCoeff=0.9718;MQ=70.73;MQ0=0;MQRankSum=-10.157;QD=80.84;ReadPosRankSum=1.307;VQSLOD=4.1579;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:45.15:0,45,3024	1/1:0,3:3:9.03:314,9,0	0/0:12,0:11:24.07:0,24,1416	0/0:7,0:10:14.92:0,15,1193	0/0:29,0:29:81.27:0,81,5014	0/0:26,0:26:75.25:0,75,5024	0/0:17,0:17:48.15:0,48,3280	1/1:9,18:27:51.15:1823,51,0	0/0:19,0:19:57.20:0,57,4099	0/0:21,0:21:60.21:0,60,4002	0/0:26,0:26:75.26:0,75,5139	0/0:15,0:15:42.14:0,42,3064	0/0:18,0:18:54.19:0,54,3657	0/0:18,0:18:54.19:0,54,3643	0/0:17,0:17:48.16:0,48,3107	0/0:11,0:11:30.10:0,30,2202	0/0:23,0:23:63.20:0,63,4181	0/0:37,0:37:99:0,111,7650	1/1:12,7:19:24.06:849,24,0	1/1:4,12:16:33.07:1237,33,0	1/1:3,3:6:9.03:387,9,0	0/0:18,0:18:51.18:0,51,3150	0/0:18,0:18:51.18:0,51,3008	0/0:19,0:19:45.15:0,45,3268	0/0:30,0:30:90.26:0,90,5566	0/0:31,0:31:90.30:0,90,6161	1/1:1,29:30:84.29:3553,84,0	0/0:21,0:21:63.22:0,63,4083
chr10	105732262	.	T	TTTGTTG	2968.47	PASS	AB=0.935;AC=11;AF=0.196;AN=56;BaseQRankSum=1.626;DP=526;FS=0.000;HRun=0;HaplotypeScore=121.3204;InbreedingCoeff=0.1926;MQ=57.90;MQ0=8;MQRankSum=-9.726;QD=18.10;ReadPosRankSum=0.224;VQSLOD=3.2681;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:74.92:0,75,1400	0/1:3,0:3:28.37:28,0,30	0/0:18,0:12:5.99:0,6,80	0/1:17,0:12:28.07:28,0,53	0/0:22,0:22:30.06:0,30,556	1/1:4,10:14:24.08:743,24,0	0/1:8,16:23:25.28:473,0,25	0/1:31,0:30:97.17:97,0,216	0/0:18,0:18:48.14:0,48,854	0/0:14,0:13:27.09:0,27,525	0/0:21,0:21:39.13:0,39,762	0/0:18,0:18:45.08:0,45,796	0/0:13,0:13:30.05:0,30,518	0/0:22,0:22:54.12:0,54,937	0/0:14,0:13:23.11:0,23,392	0/0:20,0:19:45.14:0,45,867	0/0:22,0:22:54.17:0,54,1033	0/0:18,0:17:39.02:0,39,637	0/1:21,0:18:99:103,0,192	0/1:12,0:11:53.96:54,0,81	0/0:21,0:19:12.97:0,13,179	0/0:10,0:10:24.06:0,24,403	0/0:10,0:10:20.96:0,21,340	0/0:28,0:28:63.16:0,63,1144	1/1:3,19:23:45.15:1461,45,0	0/0:21,0:21:54.18:0,54,1025	0/1:17,0:17:79.56:140,0,80	0/0:18,0:16:48.16:0,48,1025
chr10	105732376	.	CT	C	461.19	PASS	AB=0.867;AC=9;AF=0.161;AN=56;BaseQRankSum=1.122;DP=446;FS=1.609;HRun=10;HaplotypeScore=47.8319;InbreedingCoeff=0.4670;MQ=47.95;MQ0=39;MQRankSum=2.280;QD=7.69;ReadPosRankSum=3.080;VQSLOD=1.0988;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:68.61:0,69,688	0/0:4,0:3:2.97:0,3,20	0/0:23,0:3:8.79:0,9,65	0/0:30,0:1:0:0,0,0	0/1:8,2:10:30.96:31,0,112	1/1:1,15:16:34.81:291,35,0	1/1:3,8:9:20.99:182,21,0	0/0:4,0:8:10.49:0,10,66	0/1:9,1:10:8.16:8,0,131	0/0:11,0:11:27.07:0,27,291	0/0:20,0:19:36.01:0,36,351	0/0:17,0:16:29.76:0,30,293	0/0:13,0:13:35.97:0,36,363	0/0:18,0:15:26.95:0,27,246	0/0:14,0:14:20.88:0,21,200	0/0:18,0:16:39.09:0,39,416	0/0:40,0:36:84.17:0,84,894	0/0:23,1:21:6.85:0,7,415	0/0:9,1:17:37.43:0,37,206	0/0:7,0:12:19.54:0,20,103	0/0:2,0:5:6.67:0,7,34	0/0:10,0:9:6.02:0,6,66	0/1:5,1:6:19.98:20,0,27	0/0:40,0:37:92.80:0,93,961	1/1:2,5:6:9:78,9,0	0/0:15,0:11:23.97:0,24,225	0/0:8,0:11:17.31:0,17,96	0/0:2,0:2:3.01:0,3,33
chr10	105732426	.	GCGCT	G	1035.57	PASS	AB=0.653;AC=10;AF=0.192;AN=52;BaseQRankSum=6.862;DP=433;FS=0.815;HRun=0;HaplotypeScore=61.3457;InbreedingCoeff=0.6308;MQ=47.20;MQ0=60;MQRankSum=-4.327;QD=15.46;ReadPosRankSum=-0.150;VQSLOD=2.9963;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:16:42.14:0,42,1018	1/1:4,3:5:6.02:107,6,0	./.	./.	0/0:10,0:10:27.09:0,27,694	0/0:15,0:15:30.09:0,30,684	0/0:22,0:17:48.11:0,48,1225	1/1:7,2:4:3.01:53,3,0	0/0:7,0:7:15.05:0,15,386	0/0:18,0:16:45.15:0,45,1111	0/0:20,0:19:42.14:0,42,1075	0/0:9,0:9:12.04:0,12,309	0/0:14,0:14:36.12:0,36,925	0/0:12,0:12:27.09:0,27,694	0/0:8,0:8:21.07:0,21,541	0/0:8,0:8:21.07:0,21,542	0/0:28,0:28:81.19:0,81,1960	0/0:29,0:27:78.16:0,78,1951	1/1:6,5:7:15.05:267,15,0	1/1:4,6:9:15.05:267,15,0	0/1:10,5:11:99:145,0,127	0/0:2,0:2:6.02:0,6,155	0/0:16,0:14:36.12:0,36,927	0/0:34,0:34:87.30:0,87,2213	0/0:13,0:13:30.10:0,30,766	0/0:19,0:17:36.12:0,36,929	0/1:3,12:14:42.28:346,0,42	0/0:10,0:7:18.06:0,18,462
chr10	105732641	.	C	CTTGCGCTTGCTAGG	1933.97	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=0.732;DP=406;FS=3.667;HRun=0;HaplotypeScore=151.2507;InbreedingCoeff=0.8427;MQ=59.63;MQ0=10;MQRankSum=-4.747;QD=71.63;ReadPosRankSum=-3.548;VQSLOD=2.6877;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.24:0,75,3107	./.	0/0:19,0:4:2.37:0,2,8	0/0:13,0:4:5.85:0,6,147	0/0:20,0:20:54.18:0,54,2252	0/0:14,0:14:39.12:0,39,1553	0/0:17,0:17:48.16:0,48,1897	1/1:3,1:5:6.02:256,6,0	0/0:14,0:14:42.14:0,42,1679	0/0:18,0:19:57.20:0,57,2435	0/0:15,0:15:42.13:0,42,1711	0/0:18,0:18:51.18:0,51,2258	0/0:9,0:9:27.09:0,27,1194	0/0:11,0:11:29.70:0,30,1232	0/0:14,0:14:42.14:0,42,1750	0/0:10,0:10:30.10:0,30,1194	0/0:36,0:37:99:0,99,3812	0/0:21,0:21:57.15:0,57,2141	1/1:3,1:5:12.04:610,12,0	1/1:2,0:2:3.01:39,3,0	1/1:5,1:6:9.03:443,9,0	0/0:14,0:14:39.12:0,39,1619	0/0:14,0:14:36.12:0,36,1422	0/0:23,0:23:66.21:0,66,2713	0/0:20,0:19:48.14:0,48,1880	0/0:20,0:20:57.20:0,57,2246	1/1:6,1:8:15.05:737,15,0	0/0:9,0:9:24.07:0,24,955
chr10	105732867	.	A	AGACAG	9017.26	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-12.668;DP=604;FS=10.898;HRun=0;HaplotypeScore=106.3525;InbreedingCoeff=0.9990;MQ=68.98;MQ0=1;MQRankSum=-3.821;QD=77.73;ReadPosRankSum=-0.984;VQSLOD=6.4157;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.23:0,81,1582	1/1:1,7:8:21.07:607,21,0	0/0:14,0:13:29:0,29,353	0/0:22,0:17:38.68:0,39,617	0/0:24,0:24:72.25:0,72,1537	0/0:24,0:24:69.24:0,69,1480	0/0:18,0:18:51.14:0,51,961	1/1:4,21:32:96.29:2532,96,0	0/0:21,0:21:63.21:0,63,1328	0/0:30,0:30:84.27:0,84,1711	0/0:20,0:20:54.18:0,54,1121	0/0:24,0:24:72.23:0,72,1480	0/0:15,0:15:45.15:0,45,964	0/0:17,0:17:51.17:0,51,1075	0/0:31,0:30:81.26:0,81,1708	0/0:23,0:23:63.20:0,63,1264	0/0:28,0:28:75.22:0,75,1528	0/0:11,0:12:35.95:0,36,722	1/1:2,17:20:60.16:1633,60,0	1/1:1,17:18:54.12:1497,54,0	1/1:0,18:18:45.15:1427,45,0	0/0:19,0:19:57.18:0,57,1156	0/0:23,0:23:57.18:0,57,1167	0/0:16,0:16:41.93:0,42,860	0/0:31,0:31:87.26:0,87,1771	0/0:24,0:24:72.22:0,72,1451	1/1:4,14:19:42.14:1320,42,0	0/0:23,0:23:66.23:0,66,1377
chr10	105734148	.	TAAGAC	T	1741.39	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.648;DP=550;FS=0.000;HRun=0;HaplotypeScore=153.0497;InbreedingCoeff=0.9925;MQ=76.89;MQ0=0;MQRankSum=-6.013;QD=37.86;ReadPosRankSum=0.152;VQSLOD=3.3242;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:63.22:0,63,1889	0/0:6,0:6:15.05:0,15,464	0/0:19,0:19:51.17:0,51,1298	0/0:21,0:21:28.75:0,29,1207	0/0:29,0:29:72.18:0,72,2102	1/1:6,9:15:39.10:691,39,0	1/1:2,15:17:36.12:732,36,0	0/0:43,0:42:99:0,114,3199	0/0:25,0:25:63.15:0,63,1800	0/0:25,0:25:72.21:0,72,2083	0/0:17,0:17:51.09:0,51,1363	0/0:14,0:14:36.12:0,36,1059	0/0:13,0:13:30.10:0,30,828	0/0:18,0:18:51.18:0,51,1512	0/0:21,0:21:60.20:0,60,1754	0/0:17,0:17:48.16:0,48,1439	0/0:25,0:24:63.22:0,63,1923	0/0:15,0:15:30.10:0,30,929	0/0:18,0:18:54.17:0,54,1550	0/0:22,0:22:60.07:0,60,1657	0/0:16,0:16:36.10:0,36,1003	0/0:20,0:20:57.13:0,57,1538	0/0:17,0:17:42.62:0,43,1209	0/0:11,0:10:27.09:0,27,836	1/1:2,12:12:24.08:461,24,0	0/0:25,0:25:72.16:0,72,2070	0/0:25,0:25:69.18:0,69,1984	0/0:12,0:12:36.12:0,36,1056
chr10	105734152	.	AC	A	428.68	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.281;DP=548;FS=0.000;HRun=1;HaplotypeScore=109.3105;InbreedingCoeff=0.9921;MQ=76.42;MQ0=0;MQRankSum=-5.706;QD=10.21;ReadPosRankSum=0.378;VQSLOD=1.3476;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:69.21:0,69,1071	0/0:5,0:5:15.05:0,15,240	0/0:17,0:17:51.17:0,51,794	0/0:18,1:19:28.60:0,29,674	0/0:29,0:29:75.14:0,75,1139	1/1:9,5:14:35.79:271,36,0	1/1:16,0:16:31.57:155,32,0	0/0:41,0:40:99:0,117,1828	0/0:24,0:24:66.16:0,66,1022	0/0:26,0:26:78.22:0,78,1198	0/0:17,0:17:51.09:0,51,779	0/0:16,0:16:45.15:0,45,706	0/0:14,0:14:33.10:0,33,493	0/0:19,0:18:54.18:0,54,862	0/0:21,0:21:60.20:0,60,945	0/0:20,0:20:54.17:0,54,839	0/0:25,0:24:66.23:0,66,1050	0/0:15,0:15:30.10:0,30,479	0/0:20,0:20:59.40:0,59,896	0/0:22,0:22:63.08:0,63,942	0/0:16,0:16:39.11:0,39,598	0/0:19,0:19:57.13:0,57,878	0/0:17,0:17:41.89:0,42,668	0/0:12,0:11:30.09:0,30,455	1/1:12,0:10:21.68:146,22,0	0/0:25,0:25:75.15:0,75,1136	0/0:26,0:26:75.20:0,75,1167	0/0:12,0:12:36.12:0,36,575
chr10	105734879	.	GA	G	1509.83	PASS	AB=0.957;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.816;DP=222;FS=1.136;HRun=1;HaplotypeScore=42.6981;InbreedingCoeff=-0.1285;MQ=82.91;MQ0=0;MQRankSum=-0.141;QD=6.80;ReadPosRankSum=2.065;VQSLOD=0.7931;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:10:19.86:111,20,0	1/1:2,0:2:2.54:17,3,0	0/1:15,0:9:15.38:15,0,41	0/1:8,3:10:27.15:27,0,71	1/1:9,0:8:5.63:30,6,0	0/1:9,0:9:6.94:80,0,7	1/1:15,0:14:24.49:142,24,0	1/1:6,0:6:13.17:55,13,0	0/1:3,0:3:11.27:11,0,20	1/1:10,0:10:22.93:94,23,0	1/1:8,0:8:14.36:79,14,0	1/1:10,0:10:14.31:77,14,0	1/1:9,1:10:19.56:115,20,0	1/1:12,0:12:11.24:63,11,0	1/1:3,0:3:2.96:19,3,0	1/1:7,0:7:17.04:107,17,0	1/1:12,0:12:6.42:100,6,0	1/1:4,0:4:8.36:42,8,0	1/1:5,0:4:11.19:54,11,0	1/1:2,0:2:5.49:24,5,0	1/1:1,0:1:2.98:21,3,0	1/1:3,0:3:5.54:25,6,0	1/1:10,0:10:11.16:54,11,0	1/1:12,0:12:8.59:47,9,0	1/1:14,0:12:9.10:68,9,0	0/1:8,0:8:30.57:36,0,31	1/1:5,0:5:14.22:75,14,0	1/1:5,0:5:1.84:42,2,0
chr10	105734880	.	AG	A	4549.94	PASS	AB=0.729;AC=53;AF=0.946;AN=56;BaseQRankSum=-3.774;DP=217;FS=1.721;HRun=3;HaplotypeScore=32.0057;InbreedingCoeff=-0.0957;MQ=83.87;MQ0=0;MQRankSum=-0.831;QD=20.97;ReadPosRankSum=1.950;VQSLOD=4.3967;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:10:20.82:260,21,0	1/1:0,2:2:3.01:37,3,0	0/1:7,8:10:11.97:207,0,12	0/1:8,3:10:50.73:193,0,51	1/1:5,4:8:6.02:74,6,0	1/1:2,7:9:11.86:214,12,0	1/1:5,9:13:20.98:260,21,0	1/1:5,2:7:18.05:212,18,0	0/1:2,1:3:2.11:32,0,2	1/1:0,10:10:27.08:334,27,0	1/1:1,7:8:15.05:182,15,0	1/1:1,8:9:15.05:182,15,0	1/1:2,8:10:21.07:259,21,0	1/1:5,6:11:12.04:145,12,0	1/1:2,1:3:3.01:37,3,0	1/1:1,6:7:18.06:223,18,0	1/1:2,10:12:24.07:295,24,0	1/1:0,4:4:9.03:112,9,0	1/1:1,4:4:12.04:149,12,0	1/1:0,2:2:6.02:74,6,0	1/1:0,1:1:3.01:37,3,0	1/1:1,2:3:6.02:74,6,0	1/1:4,6:10:12.04:149,12,0	1/1:4,7:11:9.03:112,9,0	1/1:5,8:12:15.05:182,15,0	1/1:3,5:8:13.90:183,14,0	1/1:0,5:5:15.05:185,15,0	1/1:1,4:5:11.55:148,12,0
chr10	105735992	.	AGTCC	A	5194.99	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.516;DP=554;FS=4.665;HRun=0;HaplotypeScore=105.8903;InbreedingCoeff=0.9981;MQ=84.83;MQ0=0;MQRankSum=-8.194;QD=43.29;ReadPosRankSum=1.763;VQSLOD=5.1088;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.33:0,96,2706	1/1:0,7:7:17.98:292,18,0	0/0:25,0:25:73.80:0,74,1936	0/0:21,0:21:55.98:0,56,1366	0/0:17,0:17:42.14:0,42,1186	0/0:15,0:15:45.15:0,45,1295	0/0:22,0:22:66.23:0,66,1893	1/1:0,15:15:42.14:873,42,0	0/0:15,0:15:45.15:0,45,1293	0/0:18,0:18:48.16:0,48,1342	0/0:19,0:19:48.58:0,49,1212	0/0:12,0:12:36.10:0,36,936	0/0:13,0:13:39.13:0,39,1111	0/0:21,0:21:63.22:0,63,1755	0/0:23,0:23:69.24:0,69,1956	0/0:10,0:10:30.10:0,30,869	0/0:39,0:39:99:0,117,3223	0/0:18,0:18:48.16:0,48,1391	1/1:0,16:16:48.15:948,48,0	1/1:1,21:22:39.13:779,39,0	1/1:0,34:34:59.96:1140,60,0	0/0:15,0:15:39.13:0,39,1095	0/0:20,0:20:60.19:0,60,1564	0/0:23,0:23:69.24:0,69,1984	0/0:16,0:16:42.11:0,42,1136	0/0:23,0:23:69.23:0,69,1865	1/1:0,26:24:57.19:1162,57,0	0/0:17,0:17:48.16:0,48,1290
chr10	105736299	.	T	TGTCAGCCTCCTGTATACTGGAATTA	36309.58	PASS	AB=0.670;AC=54;AF=0.964;AN=56;BaseQRankSum=-0.019;DP=290;FS=30.332;HRun=0;HaplotypeScore=349.4147;InbreedingCoeff=-0.0496;MQ=52.96;MQ0=0;MQRankSum=-2.641;QD=125.21;ReadPosRankSum=2.077;VQSLOD=3.1144;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:15:34:2338,34,0	1/1:6,0:6:15.05:477,15,0	0/1:2,0:5:16.26:752,0,16	0/1:3,1:5:24.57:790,0,25	1/1:12,0:12:12.14:851,12,0	1/1:15,0:15:33.11:2203,33,0	1/1:11,0:6:10.85:624,11,0	1/1:7,0:5:15.04:572,15,0	1/1:12,0:12:33.11:2537,33,0	1/1:14,0:14:30.57:1708,31,0	1/1:8,0:8:21.07:1635,21,0	1/1:16,0:16:39.10:2202,39,0	1/1:9,0:8:24.08:1840,24,0	1/1:9,0:8:18.04:1450,18,0	1/1:14,0:14:30.07:1271,30,0	1/1:10,0:10:23.97:1673,24,0	1/1:9,0:9:12:472,12,0	1/1:12,0:11:22.32:1456,22,0	1/1:5,0:5:12.04:440,12,0	1/1:11,0:11:24.04:1600,24,0	1/1:11,0:11:24.93:920,25,0	1/1:5,0:5:9.02:493,9,0	1/1:8,0:8:15.05:1144,15,0	1/1:8,0:8:12.04:736,12,0	1/1:18,0:18:36.12:2260,36,0	1/1:12,0:12:32.60:1179,33,0	1/1:17,0:17:39.05:2210,39,0	1/1:5,0:5:9.03:475,9,0
chr10	105766730	.	AAG	A	202.14	PASS	AB=0.943;AC=8;AF=0.143;AN=56;BaseQRankSum=1.891;DP=494;FS=29.693;HRun=0;HaplotypeScore=148.0706;InbreedingCoeff=0.0916;MQ=34.52;MQ0=2;MQRankSum=-1.780;QD=1.59;ReadPosRankSum=-2.758;VQSLOD=0.6947;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:11:14.20:0,14,173	0/0:7,0:7:8.49:0,8,93	0/1:13,2:6:40.07:49,0,40	0/1:11,1:6:35.13:35,0,44	0/0:18,0:18:17.60:0,18,228	0/1:10,0:10:13.86:32,0,14	0/1:13,1:14:42.22:42,0,46	0/0:16,0:12:26.74:0,27,357	0/0:20,0:20:39.87:0,40,437	0/0:39,0:37:91.70:0,92,1201	0/0:7,0:7:7.40:0,7,74	0/0:32,0:31:62.62:0,63,670	0/0:18,0:17:40.64:0,41,406	0/0:19,0:19:19.74:0,20,228	0/0:18,0:18:35.72:0,36,477	0/0:24,0:24:34.10:0,34,328	0/0:13,0:13:21.55:0,22,296	0/0:4,0:4:12.04:0,12,184	0/1:14,0:10:31.29:31,0,173	0/0:15,0:15:29.50:0,30,319	1/1:49,2:47:17.44:132,17,0	0/0:26,0:26:46.38:0,46,516	0/0:16,0:16:27.74:0,28,255	0/0:25,0:25:17.98:0,18,281	0/0:10,0:9:3.91:0,4,179	0/0:23,0:21:60.99:0,61,743	0/1:10,1:10:20.89:21,0,27	0/0:5,0:5:15.05:0,15,207
chr10	105766735	.	CAT	C	782.52	PASS	AB=0.975;AC=22;AF=0.393;AN=56;BaseQRankSum=4.139;DP=758;FS=0.664;HRun=0;HaplotypeScore=231.6022;InbreedingCoeff=-0.3203;MQ=35.00;MQ0=17;MQRankSum=-2.875;QD=1.37;ReadPosRankSum=-3.605;VQSLOD=2.0710;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:8.81:0,9,250	0/1:13,1:14:35.14:35,0,60	0/0:28,0:13:7.88:0,8,184	0/0:23,0:12:10.32:0,10,118	0/0:21,0:21:0.94:0,1,324	0/1:17,0:17:14.99:50,0,15	0/1:23,1:24:42.37:59,0,42	0/1:26,3:22:94.63:95,0,294	0/1:32,0:32:3.52:4,0,478	0/1:53,0:48:70.71:71,0,603	0/1:14,0:12:21.29:21,0,86	0/1:45,0:44:16.42:16,0,793	0/1:26,0:24:12.11:12,0,534	0/1:33,0:33:9.56:10,0,286	0/1:33,0:33:10.11:10,0,584	0/1:31,0:31:99:105,0,392	0/0:17,0:17:30.31:0,30,473	0/0:10,0:10:18.25:0,18,273	0/1:22,0:18:23.46:23,0,153	0/1:22,2:22:70.82:71,0,105	1/1:74,0:67:9.92:98,10,0	0/0:28,0:28:28.80:0,29,461	0/1:20,0:20:17.60:18,0,256	0/0:38,0:38:35.79:0,36,532	1/1:19,0:18:19.85:115,20,0	0/1:39,0:35:32.64:33,0,628	0/1:12,3:14:2.99:94,0,3	0/1:6,0:6:5.04:5,0,190
chr10	105766784	.	CAT	C	4716.21	PASS	AB=0.985;AC=28;AF=0.500;AN=56;BaseQRankSum=11.108;DP=1479;FS=14.347;HRun=0;HaplotypeScore=397.7319;InbreedingCoeff=-0.6789;MQ=39.18;MQ0=27;MQRankSum=-9.390;QD=3.46;ReadPosRankSum=-5.828;VQSLOD=1.1643;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:50,0:48:30.37:30,0,724	0/1:33,0:33:11.10:108,0,11	0/1:73,0:29:99:254,0,128	0/1:79,0:34:99:225,0,148	0/1:37,0:37:28.07:28,0,261	1/1:32,0:31:16.86:138,17,0	0/1:49,3:51:27:304,0,27	0/1:103,2:91:99:730,0,393	0/1:50,1:51:81.11:81,0,437	0/1:92,0:88:99:742,0,366	0/1:31,0:30:35.83:36,0,188	0/1:67,0:66:2.79:3,0,637	0/1:44,0:44:76.47:76,0,524	0/1:52,0:52:35.61:36,0,488	0/0:53,0:53:6.39:0,6,553	0/1:41,0:38:9.99:10,0,391	0/1:40,0:39:6.10:6,0,978	0/1:25,0:25:99:100,0,314	0/1:44,1:38:99:106,0,322	0/1:46,4:48:44.80:403,0,45	0/1:122,3:111:99:112,0,952	0/1:49,0:49:70.83:71,0,221	0/1:40,0:40:42.12:42,0,250	0/0:61,0:61:26.29:0,26,1138	1/1:37,1:38:44.28:325,44,0	0/1:66,0:60:99:428,0,475	0/1:27,4:31:99:288,0,134	0/1:14,0:13:34.43:34,0,244
chr10	105768807	.	C	CAT	1509.69	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=1.115;DP=375;FS=4.354;HRun=0;HaplotypeScore=63.5971;InbreedingCoeff=0.3924;MQ=54.38;MQ0=7;MQRankSum=-2.549;QD=9.09;ReadPosRankSum=4.949;VQSLOD=2.9388;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:8.93:0,9,66	1/1:7,0:8:18.35:156,18,0	0/0:22,0:12:20.19:0,20,231	0/0:24,0:16:47.85:0,48,488	1/1:5,0:5:2.98:21,3,0	0/1:10,0:10:26.02:26,0,36	0/0:17,0:17:7.25:0,7,152	1/1:5,10:17:20.88:411,21,0	0/0:15,0:15:11.76:0,12,78	0/1:17,0:17:77.23:77,0,119	0/0:10,0:10:2.64:0,3,43	0/1:15,0:15:3.08:3,0,53	0/0:10,0:9:10:0,10,57	0/0:12,0:12:5.49:0,5,69	0/0:13,0:13:8.89:0,9,61	0/0:12,0:12:2.99:0,3,25	0/0:14,0:14:1.21:0,1,36	0/1:13,0:13:20.47:20,0,125	1/1:6,3:9:13.31:172,13,0	1/1:4,9:13:8.92:64,9,0	1/1:22,0:23:53.39:436,53,0	0/0:16,0:16:8.94:0,9,67	0/0:11,0:11:5.49:0,5,47	0/0:9,0:9:2.99:0,3,24	0/0:9,0:9:5.91:0,6,38	0/1:19,0:19:83.43:83,0,129	1/1:17,0:17:29.68:218,30,0	0/0:5,0:5:14.69:0,15,103
chr10	105770174	.	GAA	G	516.87	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=0.184;DP=564;FS=3.817;HRun=17;HaplotypeScore=69.7600;InbreedingCoeff=0.7241;MQ=49.04;MQ0=21;MQRankSum=3.318;QD=7.38;ReadPosRankSum=3.996;VQSLOD=0.2646;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:44:83.69:0,84,760	0/0:6,0:9:12.79:0,13,101	0/0:25,1:2:5.87:0,6,39	0/0:18,0:3:3.01:0,3,36	0/0:22,0:22:35.53:0,36,269	1/1:7,11:18:15.35:127,15,0	1/1:20,13:35:27.09:419,27,0	0/0:31,0:32:11.81:0,12,180	0/0:15,0:15:29.95:0,30,287	0/0:21,0:22:47.48:0,47,430	0/0:15,0:15:19.94:0,20,157	0/0:18,0:18:24.15:0,24,244	0/0:12,0:11:18.05:0,18,166	0/0:14,1:15:5.20:0,5,196	0/0:15,0:16:30.09:0,30,370	0/0:9,0:11:20.35:0,20,195	0/0:35,1:35:21.41:0,21,607	0/0:23,0:25:55.99:0,56,568	0/0:23,0:22:6.91:0,7,186	0/0:11,0:13:2.72:0,3,75	0/0:12,0:12:4.21:0,4,23	0/0:15,0:15:30.36:0,30,275	0/0:16,0:14:20.49:0,20,196	0/0:21,0:22:44.38:0,44,416	1/1:6,7:14:15.08:107,15,0	0/0:24,0:25:56.62:0,57,485	0/0:6,0:12:13.65:0,14,95	0/0:16,0:12:23.97:0,24,180
chr10	105770723	.	GA	G	1588.26	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=7.147;DP=544;FS=2.092;HRun=11;HaplotypeScore=59.2609;InbreedingCoeff=0.8788;MQ=68.80;MQ0=4;MQRankSum=2.601;QD=12.81;ReadPosRankSum=-0.536;VQSLOD=3.3577;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,2:36:59.50:0,59,807	1/1:1,5:6:14.98:123,15,0	0/1:13,0:9:2.41:2,0,110	0/0:13,0:10:1.94:0,2,107	0/0:26,0:27:62.97:0,63,635	0/0:16,1:17:17.47:0,17,391	0/0:9,0:9:15.04:0,15,160	1/1:6,15:18:38.92:319,39,0	0/0:19,0:18:42.11:0,42,447	0/0:17,0:19:41.97:0,42,424	0/0:16,0:16:39.10:0,39,416	0/0:20,0:20:45.11:0,45,480	0/0:12,0:12:24.06:0,24,255	0/0:10,1:11:27.05:0,27,280	0/0:14,0:13:39.10:0,39,416	0/0:22,0:21:51.12:0,51,535	0/0:22,1:23:35.51:0,36,573	0/0:37,0:37:99:0,102,1077	1/1:8,13:21:9.95:287,10,0	1/1:3,17:20:34.47:375,34,0	1/1:4,13:17:29.84:246,30,0	0/0:17,0:17:31.48:0,31,375	0/0:21,0:20:39.06:0,39,404	0/0:28,1:30:38.31:0,38,584	0/0:20,0:21:50.99:0,51,547	0/0:21,1:22:26.48:0,26,486	1/1:5,21:25:50.92:419,51,0	0/0:14,0:14:42.09:0,42,436
chr10	105773080	.	C	CTAT	3016.98	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.531;DP=710;FS=7.488;HRun=0;HaplotypeScore=107.7402;InbreedingCoeff=0.9999;MQ=83.73;MQ0=0;MQRankSum=-5.384;QD=52.93;ReadPosRankSum=0.500;VQSLOD=5.7426;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,2251	0/0:19,0:19:54.15:0,54,896	0/0:23,0:23:53.76:0,54,762	0/0:21,0:21:51.07:0,51,771	0/0:26,0:26:78.25:0,78,1347	1/1:1,16:17:42.06:899,42,0	1/1:1,21:23:60.21:1358,60,0	0/0:32,0:32:84.26:0,84,1395	0/0:23,0:23:66.23:0,66,1162	0/0:32,0:32:90.30:0,90,1561	0/0:20,0:20:60.17:0,60,1001	0/0:17,0:17:51.17:0,51,895	0/0:18,0:18:54.15:0,54,920	0/0:28,0:28:84.21:0,84,1386	0/0:35,0:35:99:0,102,1741	0/0:27,0:26:78.25:0,78,1337	0/0:42,0:42:99:0,123,2053	0/0:14,0:14:39.13:0,39,675	0/0:22,0:22:60.18:0,60,1006	0/0:26,0:26:75.24:0,75,1284	0/0:34,0:34:99:0,99,1717	0/0:28,0:28:81.28:0,81,1428	0/0:25,0:25:66.19:0,66,1107	0/0:33,0:33:99:0,99,1746	1/1:1,15:16:42.06:902,42,0	0/0:29,0:29:81.28:0,81,1426	0/0:21,0:21:63.22:0,63,1111	0/0:14,0:14:36.11:0,36,607
chr10	105773160	.	CCAGAACTA	C	3851.85	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.966;DP=767;FS=5.123;HRun=0;HaplotypeScore=194.9292;InbreedingCoeff=0.9999;MQ=92.31;MQ0=0;MQRankSum=-11.393;QD=58.36;ReadPosRankSum=-0.034;VQSLOD=3.3696;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,135,5527	0/0:16,0:16:39.13:0,39,1641	0/0:44,0:44:99:0,101,3466	0/0:22,0:22:57.16:0,57,1894	0/0:23,0:23:63.20:0,63,2468	1/1:1,22:23:60.20:1507,60,0	1/1:6,23:29:54.18:1393,54,0	0/0:36,0:36:75.25:0,75,2759	0/0:32,0:32:81.25:0,81,3233	0/0:37,0:37:81.27:0,81,3232	0/0:22,0:22:63.20:0,63,2442	0/0:18,0:18:54.12:0,54,2011	0/0:24,0:24:72.23:0,72,2919	0/0:27,0:27:69.24:0,69,2744	0/0:33,0:33:90.31:0,90,3604	0/0:21,0:21:57.20:0,57,2353	0/0:38,0:38:99:0,105,4343	0/0:18,0:18:54.19:0,54,2240	0/0:18,0:18:42.14:0,42,1723	0/0:23,0:23:66.21:0,66,2519	0/0:33,0:33:84.29:0,84,3492	0/0:33,0:33:78.26:0,78,3159	0/0:30,0:30:69.22:0,69,2723	0/0:26,0:26:66.23:0,66,2685	1/1:1,13:14:39.13:951,39,0	0/0:33,0:33:93.32:0,93,3873	0/0:26,0:26:69.24:0,69,2934	0/0:17,0:17:51.15:0,51,1851
chr10	105774758	.	TA	T	2640.94	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=12.747;DP=347;FS=2.066;HRun=1;HaplotypeScore=65.0757;InbreedingCoeff=0.8243;MQ=56.62;MQ0=2;MQRankSum=-9.464;QD=23.79;ReadPosRankSum=-5.296;VQSLOD=2.1212;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.11:0,48,676	1/1:0,0:10:10.64:59,11,0	0/0:9,0:5:5.20:0,5,109	0/1:5,0:3:2.66:3,0,55	0/0:23,0:23:69.15:0,69,963	0/0:18,0:18:29.35:0,29,244	0/0:8,0:8:14.75:0,15,119	1/1:11,19:29:76.38:805,76,0	0/0:8,0:8:24.03:0,24,295	0/0:10,0:10:30.09:0,30,423	0/0:12,0:12:36.12:0,36,533	0/0:3,0:3:9.03:0,9,129	0/0:6,0:6:18.05:0,18,249	0/0:7,0:7:21.07:0,21,304	0/0:11,0:11:33.11:0,33,499	0/0:8,0:8:24.05:0,24,321	0/0:15,0:15:42.14:0,42,637	0/0:27,0:27:81.27:0,81,1223	1/1:6,4:9:20.48:194,20,0	1/1:7,16:23:66.11:762,66,0	1/1:1,7:8:17.84:127,18,0	0/0:2,0:2:6.02:0,6,83	0/0:3,0:3:9.01:0,9,109	0/0:1,0:1:3.01:0,3,44	0/0:18,0:18:29.33:0,29,226	0/0:19,0:19:57.18:0,57,840	1/1:9,16:25:74.28:873,74,0	0/0:12,0:12:36.07:0,36,498
chr10	105774762	.	TA	T	1028.85	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.176;DP=338;FS=0.485;HRun=1;HaplotypeScore=69.1537;InbreedingCoeff=0.8607;MQ=57.26;MQ0=1;MQRankSum=-10.284;QD=10.19;ReadPosRankSum=-3.776;VQSLOD=-0.0997;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.16:0,48,716	1/1:10,0:10:17.81:130,18,0	0/0:9,0:6:17.76:0,18,204	0/0:6,0:3:2.95:0,3,43	0/0:21,0:21:63.19:0,63,920	0/0:18,0:18:26.31:0,26,180	0/0:7,0:7:11.74:0,12,74	1/1:22,10:31:48.78:404,49,0	0/0:7,0:7:21.04:0,21,271	0/0:8,0:8:24.08:0,24,368	0/0:13,0:13:39.12:0,39,555	0/0:3,0:3:9.03:0,9,128	0/0:6,0:6:18.04:0,18,249	0/0:8,0:8:24.05:0,24,310	0/0:12,0:12:36.10:0,36,523	0/0:7,0:7:21.07:0,21,313	0/0:15,0:15:42.14:0,42,637	0/0:28,0:28:84.25:0,84,1234	1/1:6,4:9:19.96:164,20,0	1/1:17,4:21:39.61:211,40,0	1/1:6,1:7:14.55:86,15,0	0/0:1,0:1:3.01:0,3,42	0/0:3,0:3:9:0,9,92	0/0:1,0:1:3.01:0,3,44	0/0:19,0:19:26.31:0,26,164	0/0:19,0:19:57.18:0,57,825	1/1:18,3:21:30.93:216,31,0	0/0:10,0:10:30.07:0,30,415
chr10	105774766	.	TA	T	1052.53	PASS	AB=0.667;AC=9;AF=0.161;AN=56;BaseQRankSum=10.563;DP=335;FS=1.756;HRun=1;HaplotypeScore=68.1696;InbreedingCoeff=0.7619;MQ=60.78;MQ0=1;MQRankSum=-8.358;QD=11.57;ReadPosRankSum=-4.407;VQSLOD=0.1973;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.10:0,51,692	0/0:7,0:7:5.92:0,6,35	0/0:10,0:7:20.86:0,21,254	0/0:8,0:5:6.13:0,6,52	0/0:21,0:21:63.20:0,63,934	0/0:17,0:17:22.29:0,22,123	0/0:6,0:6:7.59:0,8,27	1/1:22,12:33:47.97:403,48,0	0/0:7,0:7:18.03:0,18,225	0/0:8,0:8:24.08:0,24,368	0/0:12,0:12:36.12:0,36,530	0/0:4,0:4:12.01:0,12,132	0/0:6,0:6:18.06:0,18,267	0/0:7,0:7:21.07:0,21,302	0/0:13,0:13:39.10:0,39,547	0/0:8,0:8:24.08:0,24,355	0/0:16,0:16:45.13:0,45,660	0/0:27,0:27:81.22:0,81,1172	1/1:9,2:10:16.90:102,17,0	1/1:9,11:20:39.69:339,40,0	0/1:3,3:6:3.73:22,0,4	0/0:2,0:2:6.02:0,6,83	0/0:3,0:3:9.02:0,9,109	0/0:1,0:1:3.01:0,3,44	0/0:17,0:17:19.76:0,20,96	0/0:18,0:18:54.17:0,54,795	1/1:10,10:20:50.01:348,50,0	0/0:9,0:9:24.08:0,24,358
chr10	105774767	.	ATTTAT	A	971.32	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=8.701;DP=339;FS=2.168;HRun=0;HaplotypeScore=92.2141;InbreedingCoeff=0.5419;MQ=62.48;MQ0=1;MQRankSum=-6.566;QD=11.16;ReadPosRankSum=2.951;VQSLOD=2.4873;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:45.15:0,45,1078	0/1:7,0:7:21.75:22,0,63	0/0:11,0:8:23.64:0,24,282	0/0:9,0:6:11.52:0,12,116	0/0:21,0:21:60.20:0,60,1722	1/1:1,16:17:21.07:447,21,0	1/1:0,6:6:9.03:190,9,0	0/0:18,0:33:26.03:0,26,257	0/0:7,0:7:15.05:0,15,303	0/0:8,0:8:24.08:0,24,739	0/0:12,0:12:36.12:0,36,799	0/0:3,0:3:9.03:0,9,115	0/0:6,0:6:18.05:0,18,378	0/0:7,0:7:18.06:0,18,342	0/0:12,0:12:36.12:0,36,948	0/0:9,0:9:27.09:0,27,579	0/0:16,0:16:45.13:0,45,1172	0/0:26,0:26:75.26:0,75,2064	0/0:7,0:10:17.94:0,18,84	0/1:13,0:20:8.40:8,0,100	0/0:6,0:6:11.21:0,11,81	0/0:3,0:3:9.03:0,9,116	0/0:3,0:3:9.03:0,9,116	0/0:2,0:2:6.02:0,6,113	1/1:0,17:17:21.07:447,21,0	0/0:18,0:18:54.18:0,54,1428	0/1:15,0:20:5.84:6,0,51	0/0:9,0:9:22.53:0,23,600
chr10	105774769	.	TTA	T	1423.37	PASS	AB=0.700;AC=15;AF=0.268;AN=56;BaseQRankSum=11.072;DP=341;FS=0.501;HRun=0;HaplotypeScore=72.8520;InbreedingCoeff=0.8298;MQ=64.03;MQ0=1;MQRankSum=-7.730;QD=10.70;ReadPosRankSum=-1.389;VQSLOD=2.5023;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.12:0,48,713	0/0:7,0:7:1.68:0,2,32	0/0:12,0:9:23.84:0,24,235	0/0:9,0:6:11.21:0,11,94	0/0:20,0:20:60.20:0,60,1037	1/1:17,0:17:20.77:138,21,0	1/1:6,0:6:8.88:57,9,0	1/1:26,10:35:31.07:441,31,0	0/0:6,0:6:18.05:0,18,242	0/0:9,0:9:27.09:0,27,462	0/0:13,0:13:39.11:0,39,567	0/0:3,0:3:9.03:0,9,109	0/0:8,0:8:24.06:0,24,331	0/0:7,0:7:18.06:0,18,254	0/0:12,0:12:36.12:0,36,595	0/0:9,0:9:27.09:0,27,393	0/0:16,0:16:45.13:0,45,736	0/0:26,0:26:75.25:0,75,1278	1/1:10,2:11:20.02:142,20,0	1/1:9,11:20:35.67:362,36,0	0/1:4,3:6:6.27:6,0,9	0/0:3,0:3:8.94:0,9,90	0/0:3,0:3:9.03:0,9,110	0/0:2,0:2:6.02:0,6,88	1/1:17,0:17:20.77:138,21,0	0/0:18,0:18:54.16:0,54,846	1/1:8,10:18:40.78:332,41,0	0/0:9,0:9:24.40:0,24,362
chr10	105774770	.	TA	T	1223.78	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=11.076;DP=336;FS=0.500;HRun=1;HaplotypeScore=66.5811;InbreedingCoeff=0.8546;MQ=64.37;MQ0=0;MQRankSum=-7.229;QD=9.56;ReadPosRankSum=-1.261;VQSLOD=0.7123;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.11:0,48,616	0/0:7,0:7:6.40:0,6,26	0/0:12,0:9:23.85:0,24,232	0/0:9,0:6:10.54:0,11,87	0/0:20,0:20:60.20:0,60,846	1/1:16,0:16:19.89:96,20,0	1/1:6,0:6:8.52:41,9,0	1/1:32,2:33:49.99:422,50,0	0/0:6,0:6:18.05:0,18,222	0/0:9,0:9:26.76:0,27,354	0/0:13,0:13:39.10:0,39,493	0/0:3,0:3:9.03:0,9,111	0/0:8,0:8:24.04:0,24,276	0/0:6,0:6:18.06:0,18,235	0/0:12,0:12:36.12:0,36,497	0/0:9,0:9:27.06:0,27,326	0/0:16,0:16:45.12:0,45,596	0/0:26,0:26:75.25:0,75,1048	1/1:7,4:11:20.62:131,21,0	1/1:20,0:20:39.55:330,40,0	0/1:7,0:6:4.43:4,0,7	0/0:3,0:3:8.97:0,9,93	0/0:3,0:3:9.03:0,9,112	0/0:2,0:2:6.02:0,6,78	1/1:17,0:17:19.89:96,20,0	0/0:19,0:19:57.15:0,57,733	1/1:17,0:17:41.41:295,41,0	0/0:9,0:9:23.89:0,24,294
chr10	105775416	.	TGG	T	1129.04	PASS	AB=0.917;AC=13;AF=0.232;AN=56;BaseQRankSum=2.008;DP=430;FS=11.048;HRun=12;HaplotypeScore=154.1036;InbreedingCoeff=0.8386;MQ=60.28;MQ0=2;MQRankSum=-1.478;QD=10.08;ReadPosRankSum=2.546;VQSLOD=0.6773;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:45.09:0,45,583	1/1:2,3:5:2.86:30,3,0	0/0:17,0:10:24.02:0,24,256	0/0:6,0:3:5.98:0,6,48	0/0:22,0:22:37.25:0,37,473	0/0:13,0:14:10.92:0,11,289	0/0:19,0:20:20.27:0,20,302	1/1:7,13:22:37.87:334,38,0	0/0:13,0:13:10.41:0,10,290	0/0:16,0:18:25.94:0,26,316	0/0:11,0:10:18.06:0,18,253	0/0:9,0:9:20.55:0,21,265	0/0:11,0:11:15.05:0,15,204	0/0:6,0:6:14.04:0,14,160	0/0:15,0:17:38.48:0,38,510	0/0:18,0:18:30.98:0,31,432	0/0:13,0:15:27.09:0,27,389	0/0:15,0:15:30.08:0,30,425	1/1:10,6:17:11.58:128,12,0	1/1:8,14:21:21.03:207,21,0	1/1:0,9:9:12.03:121,12,0	0/0:17,0:18:14.52:0,15,153	0/0:13,0:14:17.40:0,17,193	0/0:14,0:14:24.08:0,24,334	0/1:10,0:11:1.17:1,0,147	0/0:22,0:25:34.71:0,35,387	1/1:3,20:26:38.62:482,39,0	0/0:5,0:8:19.74:0,20,213
chr10	105775761	.	T	TAA	3783.92	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-8.830;DP=531;FS=32.111;HRun=10;HaplotypeScore=68.1546;InbreedingCoeff=0.9774;MQ=76.86;MQ0=7;MQRankSum=0.084;QD=29.11;ReadPosRankSum=-2.315;VQSLOD=1.2786;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:39.08:0,39,396	1/1:0,9:9:21.03:288,21,0	0/0:34,0:19:15.64:0,16,218	0/0:30,0:18:16.92:0,17,196	0/0:20,0:20:51.08:0,51,518	0/0:17,0:17:48.09:0,48,486	0/0:14,0:14:24.02:0,24,244	1/1:4,28:34:83.74:1168,84,0	0/0:16,0:16:42.06:0,42,420	0/0:25,0:25:66.07:0,66,660	0/0:14,0:15:38.81:0,39,374	0/0:12,0:15:32.54:0,33,298	0/0:7,0:7:15.01:0,15,153	0/0:17,0:17:39.01:0,39,379	0/0:17,0:17:51.08:0,51,504	0/0:10,0:10:23.99:0,24,232	0/0:21,0:22:45.40:0,45,499	0/0:18,0:18:45.01:0,45,438	1/1:5,18:25:65.65:848,66,0	1/1:6,18:24:47.65:658,48,0	1/1:2,9:11:15.05:223,15,0	0/0:5,0:5:12:0,12,121	0/0:16,0:17:32.79:0,33,383	0/0:10,0:10:14.98:0,15,152	0/0:25,0:26:59.83:0,60,584	0/0:31,0:31:77.55:0,78,776	1/1:4,18:24:44.12:598,44,0	0/0:20,0:20:39.01:0,39,396
chr10	105777738	.	GCACA	G	4169.81	PASS	AB=0.706;AC=36;AF=0.783;AN=46;BaseQRankSum=-2.683;DP=608;FS=2.039;HRun=0;HaplotypeScore=134.0569;InbreedingCoeff=0.5533;MQ=56.71;MQ0=11;MQRankSum=-0.003;QD=10.05;ReadPosRankSum=1.277;VQSLOD=3.0269;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,16:45:7.49:355,7,0	0/0:3,0:6:6.88:0,7,76	./.	./.	1/1:10,6:16:3.01:47,3,0	0/0:8,0:24:14.06:0,14,205	0/0:27,0:27:10.20:0,10,107	./.	0/1:7,10:19:0.91:257,0,1	1/1:9,1:11:8.99:96,9,0	0/1:9,2:12:6.50:41,0,7	1/1:13,11:25:20.71:308,21,0	1/1:10,8:20:11.64:148,12,0	1/1:13,9:21:12.43:188,12,0	1/1:12,9:24:2.10:293,2,0	1/1:9,7:16:5.97:94,6,0	1/1:15,12:28:33.10:476,33,0	1/1:17,12:29:21.07:328,21,0	1/1:16,0:22:12.01:112,12,0	./.	./.	1/1:10,6:17:12.04:187,12,0	1/1:13,5:19:5.43:190,5,0	1/1:20,14:35:27.08:402,27,0	0/0:14,0:15:12.03:0,12,190	1/1:15,7:27:35.64:464,36,0	1/1:7,0:18:14.58:139,15,0	1/1:7,0:7:3.01:47,3,0
chr10	105779825	.	TG	T	5209.51	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.413;DP=665;FS=0.680;HRun=7;HaplotypeScore=73.2754;InbreedingCoeff=0.9980;MQ=81.29;MQ0=0;MQRankSum=-1.629;QD=24.81;ReadPosRankSum=0.541;VQSLOD=5.2193;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,126,1580	1/1:0,7:7:21.05:214,21,0	0/0:22,0:22:45.48:0,45,510	0/0:20,0:19:39.04:0,39,433	0/0:16,0:16:45.14:0,45,566	1/1:3,15:18:42.09:429,42,0	1/1:3,25:28:60.13:612,60,0	1/1:1,27:28:75.13:751,75,0	0/0:31,0:31:90.29:0,90,1131	0/0:26,0:26:66.19:0,66,802	0/0:14,0:14:36.09:0,36,428	0/0:27,0:27:78.25:0,78,978	0/0:24,0:24:69.22:0,69,867	0/0:18,0:18:48.15:0,48,602	0/0:25,0:25:69.22:0,69,868	0/0:17,0:17:51.16:0,51,639	0/0:26,0:26:66.20:0,66,818	0/0:27,0:27:72.23:0,72,906	1/1:2,18:20:54.12:551,54,0	1/1:3,21:24:60.13:611,60,0	1/1:6,32:38:81.18:826,81,0	0/0:36,0:36:93.29:0,93,1162	0/0:15,0:15:42.11:0,42,502	0/0:23,0:23:63.20:0,63,791	1/1:3,18:21:51.09:511,51,0	0/0:33,0:33:93.29:0,93,1157	1/1:3,23:26:69.15:704,69,0	0/0:6,0:6:18.04:0,18,212
chr10	105780543	.	C	CG	4548.39	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-10.626;DP=633;FS=0.000;HRun=4;HaplotypeScore=63.3873;InbreedingCoeff=0.9776;MQ=83.61;MQ0=0;MQRankSum=-2.642;QD=34.20;ReadPosRankSum=-0.872;VQSLOD=4.9126;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.27:0,96,1088	1/1:0,13:13:27.09:369,27,0	0/0:16,0:16:42.11:0,42,466	0/0:26,0:26:62.96:0,63,684	0/0:19,0:19:45.13:0,45,510	0/0:17,0:17:39.10:0,39,434	0/0:28,0:28:72.17:0,72,803	1/1:2,23:25:69.17:905,69,0	0/0:29,0:29:78.22:0,78,884	0/0:13,0:13:30.08:0,30,340	0/0:9,0:9:24.07:0,24,272	0/0:23,0:23:66.19:0,66,748	0/0:30,0:30:81.22:0,81,908	0/0:27,0:27:81.23:0,81,918	0/0:26,0:26:75.21:0,75,850	0/0:23,0:23:66.19:0,66,749	0/0:35,0:35:87.25:0,87,986	0/0:50,0:50:99:0,144,1630	1/1:2,11:13:33.11:451,33,0	1/1:1,12:13:27.09:365,27,0	1/1:1,38:39:99:1353,99,0	0/0:9,0:9:27.08:0,27,305	0/0:9,0:9:27.08:0,27,305	0/0:49,0:49:99:0,138,1539	0/0:14,0:14:36.08:0,36,397	0/0:12,0:12:33.09:0,33,374	1/1:0,30:30:81.27:1105,81,0	0/0:2,0:2:6.02:0,6,68
chr10	105781754	.	C	CTTCTTTT	2770.98	PASS	AB=0.800;AC=12;AF=0.214;AN=56;BaseQRankSum=-1.911;DP=667;FS=16.099;HRun=0;HaplotypeScore=140.1460;InbreedingCoeff=0.5691;MQ=54.32;MQ0=16;MQRankSum=-5.037;QD=15.23;ReadPosRankSum=-6.023;VQSLOD=-0.4960;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:95.90:0,96,2419	0/1:14,0:14:58.44:58,0,90	0/0:7,0:3:5.91:0,6,66	0/0:9,0:5:3.02:0,3,61	0/0:36,0:39:96.09:0,96,1614	0/0:11,0:23:33.04:0,33,423	0/1:5,0:18:5.16:5,0,260	1/1:20,0:38:84.13:1195,84,0	0/0:15,0:16:38.80:0,39,711	0/0:26,0:24:65.57:0,66,992	0/0:21,0:19:51.05:0,51,1018	0/0:20,0:18:45.17:0,45,889	0/0:24,0:25:56.86:0,57,995	0/0:14,0:11:26.98:0,27,442	0/0:18,0:22:58.02:0,58,1056	0/0:13,0:14:39.07:0,39,780	0/0:37,0:38:79.21:0,79,1777	0/0:19,0:23:54.02:0,54,928	1/1:3,12:18:42.04:635,42,0	1/1:4,16:26:21.36:496,21,0	0/1:13,0:12:5.13:194,0,5	0/0:23,0:24:56.83:0,57,927	0/0:19,0:21:47:0,47,620	0/0:27,0:29:78.08:0,78,1383	0/1:10,0:25:14.70:15,0,441	0/0:24,0:26:75.21:0,75,1343	1/1:8,13:24:9.02:341,9,0	0/0:26,0:29:76.29:0,76,1533
chr10	105782979	.	C	CGTGT	1284.90	PASS	AB=0.802;AC=14;AF=0.269;AN=52;BaseQRankSum=1.379;DP=590;FS=7.180;HRun=0;HaplotypeScore=113.7248;InbreedingCoeff=0.3258;MQ=66.28;MQ0=13;MQRankSum=-2.011;QD=5.64;ReadPosRankSum=-2.769;VQSLOD=1.3199;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:6.41:6,0,223	1/1:6,0:9:5.05:58,5,0	./.	./.	0/0:21,0:20:18.02:0,18,251	0/1:18,0:24:32.77:33,0,33	0/1:13,0:19:14.01:34,0,14	1/1:22,0:22:12.94:164,13,0	0/0:17,0:17:17.71:0,18,279	0/0:19,0:18:6.48:0,6,72	0/0:16,0:17:24.03:0,24,324	0/0:19,0:19:15.02:0,15,189	0/0:24,0:25:39.13:0,39,596	0/0:13,0:12:12.04:0,12,183	0/0:19,0:20:15.51:0,16,215	0/0:21,0:22:27.08:0,27,382	0/0:22,0:25:30.09:0,30,438	0/0:17,0:20:24.06:0,24,331	0/1:12,4:17:28.56:208,0,29	0/1:13,4:20:37.51:131,0,38	1/1:20,7:30:6.02:141,6,0	0/0:22,0:22:9.16:0,9,394	0/0:15,0:15:12.04:0,12,186	0/0:16,0:19:21.06:0,21,305	0/1:16,0:25:47.96:48,0,114	0/0:19,0:18:12.03:0,12,182	1/1:14,12:30:27.09:624,27,0	0/0:8,0:8:12.04:0,12,186
chr10	105789646	.	T	TC	6604.01	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-14.071;DP=694;FS=1.063;HRun=2;HaplotypeScore=63.1964;InbreedingCoeff=0.9979;MQ=88.86;MQ0=0;MQRankSum=-0.830;QD=39.54;ReadPosRankSum=-2.031;VQSLOD=4.5302;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:99:0,126,1556	1/1:1,9:10:24.08:346,24,0	0/0:22,0:22:57.15:0,57,686	0/0:29,0:28:54.15:0,54,735	0/0:27,0:27:75.21:0,75,903	0/0:24,0:24:69.19:0,69,831	0/0:14,0:14:39.12:0,39,484	1/1:4,34:38:99:1445,102,0	0/0:16,0:16:48.13:0,48,582	0/0:23,0:23:69.22:0,69,855	0/0:23,0:23:66.20:0,66,808	0/0:29,0:29:84.23:0,84,1015	0/0:26,0:26:78.25:0,78,967	0/0:18,0:18:54.17:0,54,669	0/0:36,0:36:99:0,105,1284	0/0:21,0:21:60.19:0,60,743	0/0:26,0:26:78.25:0,78,967	0/0:26,0:26:75.24:0,75,930	1/1:1,24:25:69.20:938,69,0	1/1:0,28:28:81.27:1162,81,0	1/1:2,29:31:87.29:1253,87,0	0/0:13,0:13:36.04:0,36,401	0/0:22,0:22:54.16:0,54,658	0/0:34,0:33:99:0,99,1211	0/0:20,0:20:60.19:0,60,744	0/0:30,0:30:87.27:0,87,1078	1/1:1,34:35:99:1461,102,0	0/0:6,0:6:18.04:0,18,209
chr10	105793399	.	C	CAGAGAG	2873.45	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=5.017;DP=646;FS=58.879;HRun=0;HaplotypeScore=149.4594;InbreedingCoeff=0.6848;MQ=66.31;MQ0=14;MQRankSum=-4.939;QD=16.42;ReadPosRankSum=-5.044;VQSLOD=-0.5264;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:66.04:0,66,1451	0/0:3,0:3:2.41:0,2,17	0/0:34,0:22:60.04:0,60,1152	0/0:34,0:23:41.89:0,42,1198	0/0:22,0:22:3.01:0,3,66	0/1:21,0:21:5.79:6,0,577	0/0:35,0:35:63:0,63,1342	1/1:35,0:33:84.10:1625,84,0	0/0:30,0:30:24.01:0,24,921	0/0:19,0:18:29.89:0,30,632	0/0:14,0:14:9.03:0,9,187	0/0:22,0:21:32.82:0,33,703	0/0:18,0:17:38.95:0,39,764	0/0:23,0:23:60.19:0,60,1242	0/0:20,0:20:45.15:0,45,974	0/0:18,0:17:38.56:0,39,860	0/0:30,0:30:66.17:0,66,1432	0/0:27,0:27:49.61:0,50,1060	1/1:15,0:13:30.06:584,30,0	1/1:17,0:16:10.45:109,10,0	1/1:18,33:53:13.97:112,14,0	0/0:13,0:13:12.04:0,12,212	0/0:8,0:6:3.01:0,3,48	0/0:35,0:35:74.85:0,75,1668	0/1:10,0:10:9.68:10,0,124	0/0:27,0:27:48.15:0,48,985	1/1:21,0:21:32.11:600,32,0	0/0:3,0:3:9.03:0,9,180
chr10	105793840	.	TAC	T	480.25	PASS	AB=0.890;AC=21;AF=0.420;AN=50;BaseQRankSum=5.911;DP=612;FS=3.114;HRun=0;HaplotypeScore=85.1717;InbreedingCoeff=0.0269;MQ=64.52;MQ0=21;MQRankSum=-3.504;QD=1.45;ReadPosRankSum=0.857;VQSLOD=1.5907;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:30.05:0,30,380	1/1:7,2:9:6.02:66,6,0	./.	./.	0/1:11,6:17:41.82:42,0,232	0/0:9,0:12:15.03:0,15,184	0/0:21,0:29:21.03:0,21,239	1/1:29,0:29:3.91:11,4,0	0/0:19,0:29:21.02:0,21,233	0/0:31,0:30:4.64:0,5,496	0/1:11,2:13:8.89:9,0,265	0/1:11,2:13:14.96:15,0,177	0/1:13,2:15:97.98:98,0,188	0/1:16,0:16:8.75:9,0,264	0/1:25,2:27:70.64:71,0,394	0/1:21,2:23:8.87:9,0,285	0/1:31,7:38:23.37:23,0,437	0/0:17,0:18:36.50:0,37,435	1/1:8,0:12:11.32:55,11,0	1/1:8,0:17:5.68:28,6,0	./.	0/0:16,2:18:18.06:0,18,264	0/1:17,3:20:33.17:33,0,319	0/1:31,4:36:17.80:18,0,519	0/0:5,0:10:3.67:0,4,49	0/1:26,0:26:2.80:3,0,308	1/1:9,0:19:29.04:152,29,0	0/0:11,0:11:12.04:0,12,180
chr10	105794750	.	T	TA	885.43	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.876;DP=483;FS=3.314;HRun=5;HaplotypeScore=62.5509;InbreedingCoeff=0.8510;MQ=67.06;MQ0=1;MQRankSum=0.046;QD=15.53;ReadPosRankSum=0.354;VQSLOD=3.1171;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:95.94:0,96,975	0/0:11,0:11:14.47:0,14,50	0/0:11,0:8:6.24:0,6,121	0/0:11,0:6:10.56:0,11,75	0/0:15,0:15:42.11:0,42,451	1/1:5,16:21:23.45:390,23,0	1/1:4,10:15:11.95:248,12,0	0/0:25,0:25:22.89:0,23,55	0/0:17,0:17:45.11:0,45,483	0/0:13,0:13:30.07:0,30,322	0/0:14,0:14:42.11:0,42,451	0/0:17,0:17:48.12:0,48,516	0/0:19,0:19:54.13:0,54,572	0/0:22,0:22:60.13:0,60,637	0/0:17,0:17:51.13:0,51,548	0/0:25,0:25:69.16:0,69,733	0/0:31,0:31:90.23:0,90,966	0/0:22,0:22:59.88:0,60,598	0/0:10,0:10:7.26:0,7,18	0/0:19,0:19:14.46:0,14,36	0/0:8,0:8:10.82:0,11,34	0/0:9,0:9:20.39:0,20,216	0/0:11,0:11:30.07:0,30,316	0/0:19,0:19:42.10:0,42,451	1/1:8,11:20:16.12:384,16,0	0/0:21,0:21:54.13:0,54,580	0/0:21,0:21:24.73:0,25,75	0/0:3,0:3:6.01:0,6,64
chr10	105794755	.	AC	A	3771.59	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.653;DP=483;FS=1.757;HRun=1;HaplotypeScore=53.7224;InbreedingCoeff=0.9839;MQ=68.68;MQ0=3;MQRankSum=-2.123;QD=26.37;ReadPosRankSum=-0.888;VQSLOD=3.2554;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1314	1/1:2,7:9:16.75:286,17,0	0/0:16,0:10:13.45:0,13,190	0/0:13,0:7:11.83:0,12,87	0/0:15,0:15:45.12:0,45,592	1/1:21,0:20:29.76:240,30,0	1/1:16,0:16:30.22:218,30,0	1/1:0,21:21:63.15:828,63,0	0/0:16,0:16:48.13:0,48,617	0/0:11,0:11:33.06:0,33,414	0/0:14,0:14:42.14:0,42,563	0/0:17,0:17:51.14:0,51,661	0/0:19,0:19:54.17:0,54,730	0/0:22,0:22:66.19:0,66,863	0/0:20,0:20:60.12:0,60,731	0/0:25,0:25:72.20:0,72,943	0/0:31,0:31:93.25:0,93,1226	0/0:22,0:22:60.13:0,60,780	1/1:1,7:8:23.99:277,24,0	1/1:0,18:18:47.98:597,48,0	1/1:4,6:10:24.74:315,25,0	0/0:10,0:10:27.06:0,27,334	0/0:11,0:11:32.97:0,33,389	0/0:17,0:17:51.05:0,51,636	1/1:19,0:19:42.35:340,42,0	0/0:20,0:20:54.15:0,54,710	1/1:2,19:21:48.22:670,48,0	0/0:4,0:4:12.02:0,12,144
chr10	105794894	.	ACCC	A	2779.91	PASS	AB=0.728;AC=13;AF=0.232;AN=56;BaseQRankSum=-0.523;DP=503;FS=15.112;HRun=12;HaplotypeScore=86.0911;InbreedingCoeff=0.7148;MQ=63.87;MQ0=16;MQRankSum=-0.540;QD=14.26;ReadPosRankSum=0.766;VQSLOD=0.5686;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:29:31.29:0,31,475	0/0:4,0:7:6.70:0,7,28	0/0:53,0:17:18.85:0,19,213	0/1:45,0:19:3.96:4,0,123	0/0:10,0:16:27.01:0,27,328	0/1:5,0:22:14.01:20,0,14	0/0:2,0:15:13.71:0,14,29	1/1:3,18:20:26.76:568,27,0	0/0:10,0:10:29.67:0,30,463	0/0:9,0:9:9.02:0,9,133	0/0:4,0:5:15.03:0,15,225	0/0:7,0:9:21.01:0,21,246	0/0:8,0:10:24.06:0,24,367	0/0:13,0:14:30.07:0,30,441	0/0:11,0:13:32.93:0,33,428	0/0:13,0:14:39.07:0,39,596	0/0:15,0:19:42.11:0,42,728	0/0:11,0:11:15.04:0,15,217	1/1:4,24:24:60.13:735,60,0	1/1:3,20:24:57.02:660,57,0	1/1:5,18:23:42.10:531,42,0	0/0:11,0:14:17.87:0,18,209	0/0:12,0:13:14.99:0,15,156	0/0:13,0:13:27.04:0,27,445	0/1:7,1:15:4.37:26,0,4	0/0:12,0:14:12.01:0,12,167	1/1:2,13:15:33.09:417,33,0	0/0:14,0:13:27.03:0,27,352
chr10	105795000	.	ATTTG	A	4066.38	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.686;DP=588;FS=10.558;HRun=0;HaplotypeScore=99.2292;InbreedingCoeff=0.9988;MQ=62.13;MQ0=1;MQRankSum=-2.033;QD=33.89;ReadPosRankSum=-1.719;VQSLOD=2.5102;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.24:0,69,1637	1/1:1,7:8:21.07:361,21,0	0/0:33,0:27:57.15:0,57,1151	0/0:27,0:23:44.26:0,44,940	0/0:17,0:17:48.16:0,48,1181	0/0:18,0:18:45.15:0,45,1080	0/0:19,0:19:48.15:0,48,1111	1/1:8,18:26:54.11:817,54,0	0/0:21,0:21:57.18:0,57,1336	0/0:13,0:13:36.12:0,36,866	0/0:21,0:21:54.19:0,54,1308	0/0:25,0:25:63.20:0,63,1518	0/0:16,0:16:42.13:0,42,983	0/0:17,0:17:48.16:0,48,1131	0/0:27,0:27:72.23:0,72,1692	0/0:17,0:17:42.14:0,42,1062	0/0:27,0:27:72.25:0,72,1784	0/0:18,0:18:54.18:0,54,1299	1/1:4,12:16:30.05:445,30,0	1/1:2,24:26:72.19:1095,72,0	1/1:4,22:26:48.09:779,48,0	0/0:12,0:12:33.11:0,33,758	0/0:19,0:19:48.15:0,48,1133	0/0:31,0:31:81.24:0,81,1846	0/0:27,0:27:78.27:0,78,1937	0/0:24,0:24:69.23:0,69,1587	1/1:4,14:16:33.11:569,33,0	0/0:11,0:10:30.10:0,30,758
chr10	105795273	.	CTGGA	C	2014.61	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.156;DP=781;FS=4.545;HRun=0;HaplotypeScore=130.2823;InbreedingCoeff=0.8860;MQ=75.50;MQ0=1;MQRankSum=0.842;QD=12.28;ReadPosRankSum=-0.743;VQSLOD=2.8625;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:60.20:0,60,1387	0/0:4,0:8:5.89:0,6,90	0/0:43,0:30:2.88:0,3,20	0/0:32,0:26:3.01:0,3,69	0/0:21,0:21:33.11:0,33,744	0/0:15,0:35:39.13:0,39,712	0/0:20,0:27:15.05:0,15,260	1/1:29,4:32:12.03:151,12,0	0/0:15,0:24:36.12:0,36,618	0/0:32,0:32:48.16:0,48,1129	0/0:14,0:14:24.07:0,24,521	0/0:18,0:18:27.09:0,27,625	0/0:27,0:27:54.19:0,54,1257	0/0:26,0:26:42.13:0,42,942	0/0:29,0:29:54.18:0,54,1268	0/0:34,1:35:34.33:0,34,1750	0/0:20,0:20:30.10:0,30,696	0/0:34,0:34:45.15:0,45,1064	1/1:13,8:21:21.05:298,21,0	1/1:23,13:36:30.10:469,30,0	1/1:23,21:44:48.16:751,48,0	0/0:20,0:20:21.07:0,21,497	0/0:15,0:22:21.07:0,21,361	0/0:22,0:22:45.15:0,45,1048	0/0:18,0:27:30.10:0,30,525	0/0:35,0:35:57.20:0,57,1332	1/1:16,14:30:33.11:516,33,0	0/0:21,0:21:45.15:0,45,1051
chr10	105798177	.	AGTTCG	A	5761.23	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.333;DP=764;FS=0.833;HRun=0;HaplotypeScore=142.8813;InbreedingCoeff=0.9962;MQ=87.42;MQ0=0;MQRankSum=-7.264;QD=37.41;ReadPosRankSum=0.331;VQSLOD=4.5873;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,175,5110	1/1:2,6:8:15.05:302,15,0	0/0:26,0:26:54.18:0,54,1487	0/0:30,0:30:72.25:0,72,1804	0/0:23,0:23:57.20:0,57,1688	0/0:26,0:26:66.23:0,66,1968	0/0:17,0:17:39.13:0,39,1149	1/1:13,21:34:63.22:1268,63,0	0/0:31,0:31:87.30:0,87,2602	0/0:38,0:38:99:0,105,2995	0/0:12,0:12:33.11:0,33,950	0/0:22,0:22:54.18:0,54,1600	0/0:25,0:25:69.24:0,69,2064	0/0:21,0:21:63.22:0,63,1849	0/0:25,0:25:75.26:0,75,2242	0/0:39,0:39:99:0,108,3189	0/0:46,0:46:99:0,129,3870	0/0:19,0:19:57.20:0,57,1633	1/1:4,20:24:57.16:1056,57,0	1/1:5,18:23:39.13:781,39,0	1/1:9,23:32:35.95:724,36,0	0/0:19,0:19:54.17:0,54,1530	0/0:26,0:26:63.22:0,63,1842	0/0:44,0:44:99:0,114,3367	0/0:16,0:16:30.10:0,30,904	0/0:34,0:34:96.32:0,96,2809	1/1:4,29:33:81.28:1630,81,0	0/0:9,0:9:24.08:0,24,723
chr10	105802538	.	C	CT	657.47	PASS	AB=0.866;AC=8;AF=0.143;AN=56;BaseQRankSum=9.533;DP=538;FS=136.371;HRun=3;HaplotypeScore=76.2764;InbreedingCoeff=-0.0144;MQ=52.04;MQ0=8;MQRankSum=-7.643;QD=4.16;ReadPosRankSum=5.115;VQSLOD=-0.4389;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:62.87:0,63,606	0/1:17,3:20:53.76:54,0,164	0/1:13,0:4:5.61:6,0,29	0/0:13,0:2:0.47:0,0,1	0/0:23,0:23:53.07:0,53,574	0/1:20,8:25:81.25:221,0,81	0/1:18,2:19:26.97:27,0,131	0/0:32,0:22:53.18:0,53,355	0/0:25,0:25:59.93:0,60,605	0/0:19,0:18:48.07:0,48,513	0/0:20,0:20:53.52:0,54,531	0/0:14,0:14:39.04:0,39,432	0/0:11,0:11:29.95:0,30,273	0/0:14,0:14:29.97:0,30,287	0/0:18,0:18:41.95:0,42,421	0/0:21,0:21:60.12:0,60,653	0/0:24,0:25:53.75:0,54,623	0/0:23,0:22:63.02:0,63,663	0/0:13,0:12:24.09:0,24,155	0/1:13,9:22:81.08:245,0,81	0/1:6,0:5:0:0,0,0	0/0:11,0:11:26.99:0,27,278	0/0:12,0:12:27.51:0,28,282	0/0:15,0:15:26.27:0,26,287	0/1:18,6:25:99:140,0,134	0/0:23,0:23:62.95:0,63,605	0/1:20,4:24:90.74:91,0,119	0/0:15,0:15:29.72:0,30,356
chr10	105802543	.	A	AAG	1338.70	PASS	AB=0.819;AC=7;AF=0.125;AN=56;BaseQRankSum=-1.869;DP=548;FS=1.790;HRun=0;HaplotypeScore=93.3968;InbreedingCoeff=-0.0600;MQ=52.31;MQ0=7;MQRankSum=-1.446;QD=9.70;ReadPosRankSum=4.232;VQSLOD=3.3672;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:71.96:0,72,857	0/1:20,1:21:99:101,0,127	0/0:13,0:4:8.11:0,8,64	0/0:10,0:2:3.01:0,3,31	0/0:22,0:22:54.01:0,54,718	0/1:12,16:26:99:310,0,160	0/1:3,16:19:4.23:501,0,4	0/0:34,0:28:21.58:0,22,231	0/0:24,0:24:66.05:0,66,830	0/0:19,0:18:49.94:0,50,646	0/0:22,0:22:65.84:0,66,767	0/0:13,0:13:36.08:0,36,522	0/0:13,0:13:33:0,33,360	0/0:13,0:13:33.03:0,33,383	0/0:18,0:18:51.04:0,51,619	0/0:21,0:21:63.18:0,63,868	0/0:23,0:23:62.99:0,63,793	0/0:22,0:21:60.09:0,60,798	0/1:15,0:14:7.93:8,0,136	0/0:28,0:28:41.47:0,41,357	0/1:6,0:5:8.88:9,0,14	0/0:11,0:11:29.94:0,30,382	0/0:14,0:14:35.94:0,36,406	0/0:17,0:15:38.98:0,39,505	0/1:8,15:24:81.77:507,0,82	0/0:24,0:24:69.05:0,69,792	0/1:24,0:24:28.87:29,0,148	0/0:18,0:18:47.94:0,48,611
chr10	105802732	.	G	GTTT	4669.91	PASS	AB=0.543;AC=16;AF=0.286;AN=56;BaseQRankSum=8.499;DP=704;FS=18.592;HRun=10;HaplotypeScore=110.7812;InbreedingCoeff=0.7936;MQ=60.36;MQ0=0;MQRankSum=-4.354;QD=20.13;ReadPosRankSum=-4.804;VQSLOD=0.5435;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:89.87:0,90,1053	1/1:4,6:11:15.05:287,15,0	0/0:17,0:14:23.96:0,24,272	0/0:13,0:10:3.08:0,3,114	0/0:28,0:29:72.08:0,72,845	0/1:3,0:30:4.33:52,0,4	1/1:3,0:27:23.67:55,24,0	1/1:26,7:34:67.15:813,67,0	0/0:26,0:26:60.08:0,60,713	0/0:25,0:25:54.44:0,54,617	0/0:18,0:19:43.44:0,43,530	0/0:19,0:19:55.41:0,55,660	0/0:24,0:24:60.06:0,60,700	0/0:22,0:23:66.10:0,66,771	0/0:43,0:45:99:0,117,1339	0/0:41,0:41:95.24:0,95,1142	0/0:21,0:21:54.13:0,54,654	0/0:19,0:19:54.16:0,54,651	1/1:5,18:24:59.64:910,60,0	1/1:3,16:22:51.02:697,51,0	1/1:4,21:28:42.10:708,42,0	0/0:14,0:14:42.05:0,42,472	0/0:15,0:15:33.05:0,33,399	0/0:49,0:49:99:0,117,1395	0/1:4,0:19:20.57:21,0,88	0/0:30,0:31:69.03:0,69,806	1/1:6,29:37:59.94:1127,60,0	0/0:5,0:5:2.78:0,3,36
chr10	105803641	.	G	GACAC	1234.99	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-2.251;DP=524;FS=3.269;HRun=0;HaplotypeScore=93.0780;InbreedingCoeff=0.8527;MQ=66.05;MQ0=9;MQRankSum=-0.094;QD=21.67;ReadPosRankSum=-1.573;VQSLOD=3.1193;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:40:11.60:0,12,748	0/0:1,0:6:12.01:0,12,112	0/0:28,0:15:9.03:0,9,143	0/0:28,0:16:5.50:0,6,57	0/0:13,0:13:29.74:0,30,398	1/1:6,15:20:26.92:649,27,0	1/1:7,6:14:8.77:157,9,0	0/0:29,0:29:18.05:0,18,264	0/0:16,0:16:27.07:0,27,384	0/0:14,0:14:23.78:0,24,285	0/0:12,0:13:27.08:0,27,390	0/0:16,0:16:21:0,21,298	0/0:11,0:11:24.07:0,24,361	0/0:10,0:10:19.87:0,20,248	0/0:14,0:16:39.12:0,39,573	0/0:14,0:14:27.09:0,27,427	0/0:44,0:46:93.21:0,93,1336	0/0:23,0:23:51.15:0,51,792	0/0:14,0:13:14.63:0,15,179	0/0:9,0:10:14.45:0,14,320	0/0:22,0:21:12.09:0,12,335	0/0:15,0:15:24.03:0,24,315	0/0:11,0:11:18.06:0,18,289	0/0:18,0:18:18.52:0,19,258	1/1:7,9:22:26.52:565,27,0	0/0:15,0:16:11.11:0,11,408	0/0:15,0:15:27.94:0,28,471	0/0:18,0:19:28.18:0,28,703
chr10	105804173	.	CTA	C	2373.63	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.872;DP=654;FS=1.684;HRun=0;HaplotypeScore=80.1511;InbreedingCoeff=0.9983;MQ=94.62;MQ0=1;MQRankSum=-1.490;QD=34.91;ReadPosRankSum=0.984;VQSLOD=5.4203;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,2389	0/0:7,0:7:21.07:0,21,377	0/0:35,0:35:99:0,101,1631	0/0:26,0:26:75:0,75,1288	0/0:21,0:21:60.21:0,60,1123	1/1:1,29:29:72.24:1059,72,0	1/1:0,21:21:51.17:751,51,0	0/0:31,0:31:90.31:0,90,1671	0/0:16,0:16:48.16:0,48,884	0/0:24,0:24:72.24:0,72,1322	0/0:10,0:10:30.10:0,30,561	0/0:31,0:31:93.32:0,93,1733	0/0:17,0:17:51.17:0,51,955	0/0:26,0:26:78.27:0,78,1461	0/0:32,0:32:93.32:0,93,1742	0/0:27,0:27:81.25:0,81,1438	0/0:23,0:23:69.24:0,69,1277	0/0:20,0:20:60.21:0,60,1108	0/0:19,0:19:54.18:0,54,970	0/0:29,0:29:87.28:0,87,1582	0/0:29,0:29:84.27:0,84,1517	0/0:20,0:20:54.19:0,54,1009	0/0:16,0:16:48.16:0,48,893	0/0:29,0:29:87.30:0,87,1629	1/1:0,17:17:48.16:707,48,0	0/0:25,0:24:75.26:0,75,1400	0/0:17,0:17:48.16:0,48,896	0/0:11,0:11:33.11:0,33,594
chr10	105805739	.	A	AAGG	2966.17	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-5.258;DP=695;FS=5.270;HRun=0;HaplotypeScore=103.4759;InbreedingCoeff=0.9790;MQ=62.41;MQ0=1;MQRankSum=-3.567;QD=36.62;ReadPosRankSum=1.487;VQSLOD=4.1294;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,132,2170	1/1:0,5:6:15.05:339,15,0	0/0:18,0:11:33.11:0,33,533	0/0:39,0:30:78:0,78,1141	0/0:31,0:31:63.08:0,63,979	0/0:16,0:16:45.07:0,45,704	0/0:22,0:21:51.13:0,51,814	1/1:10,6:15:15.02:297,15,0	0/0:38,0:38:99:0,99,1517	0/0:26,0:24:66.22:0,66,1101	0/0:21,0:21:48.13:0,48,786	0/0:41,0:41:99:0,105,1753	0/0:25,0:25:69.17:0,69,1116	0/0:23,0:23:60.13:0,60,938	0/0:37,0:37:96.23:0,96,1545	0/0:23,0:23:66.14:0,66,1012	0/0:55,0:55:99:0,147,2418	0/0:27,0:27:75.16:0,75,1180	1/1:2,8:12:30.05:563,30,0	1/1:1,7:9:9.03:203,9,0	1/1:3,21:25:60.21:1353,60,0	0/0:17,0:17:36.12:0,36,613	0/0:20,0:20:39.01:0,39,545	0/0:27,0:27:75.24:0,75,1248	0/0:21,0:21:41.74:0,42,650	0/0:30,0:30:84.29:0,84,1432	1/1:1,11:12:18.06:394,18,0	0/0:8,0:8:21.54:0,22,359
chr10	105805915	.	A	AGAT	1305.28	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=7.557;DP=653;FS=0.000;HRun=0;HaplotypeScore=86.8381;InbreedingCoeff=0.8912;MQ=46.32;MQ0=34;MQRankSum=-4.012;QD=22.12;ReadPosRankSum=1.646;VQSLOD=3.5104;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:81.08:0,81,1117	1/1:2,5:7:9.03:189,9,0	0/0:22,0:5:3.01:0,3,45	0/0:26,0:10:18.05:0,18,244	0/0:33,0:33:48.12:0,48,695	0/0:33,0:32:45.11:0,45,651	0/0:18,0:17:27.51:0,28,380	./.	0/0:24,0:22:57.10:0,57,802	0/0:27,0:25:69.20:0,69,1014	0/0:25,0:23:42.01:0,42,578	0/0:28,0:27:66:0,66,946	0/0:25,0:24:42.06:0,42,578	0/0:17,0:17:26.95:0,27,349	0/0:30,0:29:51:0,51,745	0/0:14,0:13:36.12:0,36,540	0/0:31,0:30:66.22:0,66,993	0/0:23,0:22:39.09:0,39,561	1/1:4,4:5:11.93:205,12,0	1/1:4,9:11:21.07:440,21,0	1/1:8,3:10:3.01:63,3,0	0/0:15,0:14:21.07:0,21,314	0/0:24,0:24:60.16:0,60,868	0/0:18,0:18:33.05:0,33,444	0/0:25,0:25:63.17:0,63,920	0/0:32,0:30:75.25:0,75,1109	1/1:5,14:15:27.09:566,27,0	0/0:45,0:42:99:0,102,1509
chr10	105806433	.	GA	G	1162.28	PASS	AB=0.843;AC=13;AF=0.250;AN=52;BaseQRankSum=4.820;DP=358;FS=1.080;HRun=12;HaplotypeScore=45.3484;InbreedingCoeff=0.4060;MQ=66.01;MQ0=6;MQRankSum=-0.005;QD=9.08;ReadPosRankSum=-0.300;VQSLOD=1.9622;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:75.62:0,76,758	./.	0/0:12,2:6:4.82:0,5,33	0/0:11,0:9:2.77:0,3,28	0/1:11,1:12:5.21:5,0,134	0/0:20,0:20:42.08:0,42,425	0/0:6,0:7:17.87:0,18,166	1/1:3,22:26:14.30:417,14,0	0/0:7,0:7:17.86:0,18,161	0/1:10,1:12:6.35:6,0,136	0/0:9,0:9:13.27:0,13,125	0/0:15,0:15:30.01:0,30,293	0/0:9,0:9:21.02:0,21,206	0/1:10,2:12:16.42:16,0,213	0/0:19,2:21:24.62:0,25,402	0/0:13,0:12:29.34:0,29,269	0/0:12,1:12:4.30:0,4,221	0/0:17,1:18:21.85:0,22,401	0/1:7,4:11:65.18:72,0,65	1/1:2,16:18:41.83:325,42,0	1/1:0,5:5:11.95:93,12,0	./.	0/1:9,2:11:13.39:13,0,241	0/0:7,0:7:12.02:0,12,122	0/0:9,1:10:3.83:0,4,217	0/0:18,0:18:42.08:0,42,425	1/1:2,18:21:49.83:377,50,0	0/0:5,0:5:9.02:0,9,91
chr10	105806942	.	G	GAT	2204.25	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-6.141;DP=549;FS=13.348;HRun=0;HaplotypeScore=85.0334;InbreedingCoeff=0.9734;MQ=71.10;MQ0=8;MQRankSum=-0.711;QD=21.19;ReadPosRankSum=-2.109;VQSLOD=2.8993;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:99:0,102,1241	1/1:1,4:6:9.03:125,9,0	0/0:18,0:15:25.69:0,26,230	0/0:9,0:7:14.81:0,15,102	0/0:39,0:38:88.75:0,89,1024	0/0:12,0:12:30.07:0,30,383	0/0:19,0:17:48.03:0,48,584	1/1:9,20:29:31.37:665,31,0	0/0:17,0:15:36.09:0,36,444	0/0:23,0:23:66.03:0,66,780	0/0:20,0:20:48.03:0,48,559	0/0:12,0:11:27.04:0,27,278	0/0:9,0:10:17.95:0,18,182	0/0:17,0:17:29.37:0,29,321	0/0:17,0:17:26.98:0,27,305	0/0:27,0:26:63.33:0,63,676	0/0:32,0:31:58.17:0,58,695	0/0:16,0:16:32.92:0,33,392	1/1:20,7:28:71.95:865,72,0	1/1:6,6:12:17.94:206,18,0	1/1:1,13:14:24.08:382,24,0	0/0:24,0:24:56.86:0,57,635	0/0:18,0:17:42.13:0,42,559	0/0:14,0:14:30.06:0,30,374	0/0:17,0:18:45.09:0,45,526	0/0:23,0:22:60.03:0,60,748	1/1:5,10:15:12.03:143,12,0	0/0:18,0:17:40.35:0,40,500
chr10	105806944	.	T	TA	1281.66	PASS	AB=0.973;AC=10;AF=0.179;AN=56;BaseQRankSum=0.479;DP=623;FS=5.273;HRun=1;HaplotypeScore=111.1621;InbreedingCoeff=0.6983;MQ=65.62;MQ0=9;MQRankSum=-0.785;QD=10.86;ReadPosRankSum=-0.874;VQSLOD=1.4118;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:50:99:0,110,1199	1/1:8,0:8:8.80:75,9,0	0/0:17,0:14:26.23:0,26,229	0/0:8,0:6:14.72:0,15,94	0/0:42,0:41:99:0,101,985	0/0:13,0:13:33.06:0,33,386	0/0:21,0:19:49.58:0,50,541	0/1:33,2:35:32.99:461,0,33	0/0:21,0:19:36.08:0,36,415	0/0:25,0:25:66.61:0,67,754	0/0:21,0:21:48.02:0,48,529	0/0:14,0:13:27.01:0,27,265	0/0:13,0:13:20.01:0,20,177	0/0:23,0:23:28.65:0,29,268	0/0:19,0:19:31.51:0,32,313	0/0:29,0:28:63.56:0,64,643	0/0:40,0:38:62:0,62,645	0/0:18,0:17:34.67:0,35,368	1/1:25,2:27:54.38:558,54,0	1/1:16,0:16:3.07:139,3,0	1/1:14,0:14:8.25:163,8,0	0/0:24,0:24:61.25:0,61,614	0/0:22,0:21:45.06:0,45,537	0/0:18,0:18:33.01:0,33,369	0/0:22,0:22:50.99:0,51,537	0/0:23,0:22:60.09:0,60,696	0/1:18,0:18:5.75:40,0,6	0/0:21,0:20:45.10:0,45,493
chr10	105810929	.	CGTGTGT	C	745.49	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.468;DP=706;FS=2.293;HRun=0;HaplotypeScore=151.5291;InbreedingCoeff=0.8823;MQ=62.69;MQ0=21;MQRankSum=-5.781;QD=10.96;ReadPosRankSum=3.600;VQSLOD=2.9651;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:45:86.39:0,86,2597	0/0:7,0:11:5.98:0,6,49	0/0:68,0:34:17.51:0,18,278	0/0:64,0:15:9.91:0,10,188	0/0:33,0:33:54.16:0,54,1670	1/1:9,17:29:21.96:439,22,0	1/1:9,8:16:9.03:188,9,0	0/0:26,0:26:48.15:0,48,1204	0/0:17,0:17:27.09:0,27,875	0/0:20,0:20:36.10:0,36,897	0/0:17,0:19:39.13:0,39,1147	0/0:17,0:21:41.77:0,42,1141	0/0:13,0:13:21.05:0,21,556	0/0:17,0:17:48.15:0,48,1422	0/0:18,0:18:45.14:0,45,1373	0/0:28,0:30:83.31:0,83,2489	0/0:19,0:22:39.12:0,39,1064	0/0:25,0:26:54.13:0,54,1399	0/0:16,0:16:21.04:0,21,447	0/0:8,0:14:12.04:0,12,198	0/0:31,0:28:11.86:0,12,274	0/0:17,0:18:36.11:0,36,1083	0/0:18,0:17:39.13:0,39,1165	0/0:31,0:32:78.21:0,78,2121	1/1:6,15:22:12.04:251,12,0	0/0:26,0:26:60.07:0,60,1671	0/0:18,0:18:18.68:0,19,407	0/0:9,0:10:17.21:0,17,575
chr10	105811448	.	CGT	C	267.41	PASS	AB=0.956;AC=12;AF=0.231;AN=52;BaseQRankSum=2.251;DP=556;FS=1.474;HRun=0;HaplotypeScore=82.0390;InbreedingCoeff=-0.1626;MQ=58.65;MQ0=9;MQRankSum=2.558;QD=1.36;ReadPosRankSum=1.581;VQSLOD=1.7079;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,4:27:28.61:0,29,263	1/1:5,0:7:2.90:16,3,0	./.	./.	0/0:16,0:16:17.12:0,17,225	0/0:14,0:13:11.75:0,12,97	0/1:21,0:21:41.03:41,0,120	0/0:19,0:19:14.88:0,15,109	0/1:9,3:12:12.31:12,0,230	0/0:32,0:32:12.30:0,12,440	0/0:9,0:9:6.02:0,6,90	0/0:31,5:35:5.15:0,5,356	0/1:16,0:18:9.08:9,0,118	0/1:18,0:18:3.65:68,0,4	0/0:24,0:24:2.61:0,3,340	0/1:10,0:10:15.31:15,0,168	0/1:31,1:33:11.01:11,0,469	0/1:26,0:25:74.66:75,0,338	0/0:22,0:20:6.18:0,6,74	0/0:12,0:12:2.09:0,2,24	0/0:57,0:55:22.02:0,22,176	0/0:4,0:4:2.97:0,3,20	0/1:9,0:9:22.73:23,0,37	0/1:29,3:30:99:123,0,270	0/0:12,0:12:10.82:0,11,99	0/0:19,0:24:48.40:0,48,474	0/0:18,0:17:16.79:0,17,128	0/1:11,0:11:12.32:12,0,112
chr10	105811484	.	TGC	T	331.24	PASS	AB=0.964;AC=14;AF=0.250;AN=56;BaseQRankSum=7.263;DP=486;FS=1.497;HRun=0;HaplotypeScore=89.2382;InbreedingCoeff=0.6162;MQ=60.45;MQ0=7;MQRankSum=-0.339;QD=2.32;ReadPosRankSum=1.288;VQSLOD=1.6708;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:34.49:0,34,329	1/1:7,0:7:2.76:14,3,0	0/0:7,0:5:1.32:0,1,63	0/0:3,0:2:5.96:0,6,44	0/0:17,0:17:29.78:0,30,312	0/0:14,0:13:14.77:0,15,142	0/0:19,0:19:30.58:0,31,224	1/1:13,0:11:12.54:68,13,0	0/0:19,0:19:29.65:0,30,366	0/0:23,0:23:41.96:0,42,460	0/0:9,0:9:20.74:0,21,199	0/0:29,0:28:17.09:0,17,446	0/0:13,0:13:23.50:0,23,227	1/1:5,13:18:8.80:112,9,0	0/0:19,1:20:4.42:0,4,418	0/0:9,0:9:0.50:0,0,181	0/0:31,1:32:27.85:0,28,657	0/0:28,1:29:31.15:0,31,569	1/1:18,0:17:17.49:114,17,0	1/1:15,0:15:5.04:33,5,0	0/1:44,0:42:3.51:60,0,4	0/0:2,0:2:5.97:0,6,59	0/1:12,1:12:15.83:16,0,99	0/0:30,0:28:15.16:0,15,363	0/0:10,0:10:19.35:0,19,136	0/0:24,0:24:43.89:0,44,419	1/1:15,0:14:11.80:82,12,0	0/0:4,0:4:10.85:0,11,150
chr10	105811492	.	CGCGCGCGT	C	713.60	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=3.530;DP=454;FS=1.759;HRun=0;HaplotypeScore=129.3859;InbreedingCoeff=0.2881;MQ=67.92;MQ0=4;MQRankSum=-0.119;QD=7.51;ReadPosRankSum=-1.745;VQSLOD=1.8238;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:45.03:0,45,1344	1/1:1,6:7:2.92:81,3,0	0/0:10,0:9:24.33:0,24,389	0/0:6,0:5:5.78:0,6,201	0/0:20,0:20:51.16:0,51,1581	0/0:13,0:13:14.88:0,15,440	0/0:22,0:22:2.59:0,3,896	1/1:12,0:10:23.74:316,24,0	0/0:19,0:19:39.13:0,39,1542	0/0:18,0:18:48.08:0,48,1463	0/0:9,0:9:21.07:0,21,810	0/0:27,0:26:60.19:0,60,2180	0/0:10,0:10:27.08:0,27,874	0/0:17,0:17:15.52:0,16,331	0/0:17,0:17:45.15:0,45,1661	0/0:8,0:8:18.06:0,18,712	0/0:31,0:31:87.27:0,87,3061	0/0:28,0:28:82.83:0,83,2821	0/1:18,0:17:19.40:236,0,19	0/1:13,0:13:31.28:97,0,31	0/1:35,0:34:28.64:29,0,64	0/0:4,0:4:12.04:0,12,324	0/0:10,0:10:30.09:0,30,916	0/0:29,0:28:61.09:0,61,1871	0/0:10,0:10:22.87:0,23,450	0/0:19,0:19:57.19:0,57,1777	0/1:10,0:9:63.98:93,0,64	0/0:4,0:4:12.04:0,12,465
chr10	105811494	.	CGCGCGT	C	1280.46	PASS	AB=0.825;AC=12;AF=0.214;AN=56;BaseQRankSum=4.436;DP=451;FS=0.000;HRun=0;HaplotypeScore=116.1881;InbreedingCoeff=0.7240;MQ=71.05;MQ0=4;MQRankSum=-1.529;QD=11.04;ReadPosRankSum=-1.998;VQSLOD=2.3577;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:39.05:0,39,1016	1/1:7,0:7:2.75:56,3,0	0/0:11,0:10:18.79:0,19,351	0/0:8,0:7:12.82:0,13,220	0/0:20,0:20:48.15:0,48,1213	0/0:13,0:13:14.57:0,15,314	0/1:22,0:22:57.76:58,0,567	1/1:4,9:11:23.79:381,24,0	0/0:19,0:19:42.13:0,42,1251	0/0:17,0:17:42.12:0,42,1094	0/0:9,0:9:21.07:0,21,651	0/0:25,0:25:60.19:0,60,1738	0/0:10,0:10:27.08:0,27,697	0/0:17,0:17:15.04:0,15,201	0/0:17,0:17:45.09:0,45,1309	0/0:7,0:7:18.06:0,18,561	0/0:31,0:31:80.39:0,80,2307	0/0:28,0:28:70.92:0,71,2079	1/1:4,12:15:35.61:470,36,0	0/1:6,7:13:8.98:121,0,9	1/1:35,0:34:14.76:188,15,0	0/0:4,0:4:12.01:0,12,238	0/0:10,0:10:27.09:0,27,694	0/0:28,0:27:56.45:0,56,1328	0/0:10,0:10:19.54:0,20,267	0/0:19,0:19:54.15:0,54,1306	1/1:9,1:9:13.49:178,13,0	0/0:4,0:4:12.04:0,12,367
chr10	105811498	.	CGT	C	1014.50	PASS	AB=0.979;AC=17;AF=0.304;AN=56;BaseQRankSum=6.319;DP=437;FS=1.881;HRun=0;HaplotypeScore=90.2099;InbreedingCoeff=0.7214;MQ=75.84;MQ0=4;MQRankSum=-2.574;QD=7.00;ReadPosRankSum=-2.801;VQSLOD=2.4904;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:42.04:0,42,561	1/1:7,0:7:5.92:53,6,0	0/0:12,0:11:28.98:0,29,319	0/0:11,0:11:20.88:0,21,225	0/0:20,0:20:48.07:0,48,619	0/1:14,1:15:29.41:32,0,29	1/1:20,0:20:12.50:132,12,0	1/1:12,0:10:23.74:190,24,0	0/0:19,0:19:43.93:0,44,643	0/0:16,0:16:39.03:0,39,556	0/0:9,0:9:24.07:0,24,362	0/0:23,0:23:57.04:0,57,844	0/0:10,0:10:27.07:0,27,400	0/1:15,0:15:26.94:27,0,36	0/0:19,0:19:32.40:0,32,663	0/0:8,0:8:20.35:0,20,296	0/0:31,0:31:60.83:0,61,1061	0/0:24,0:24:53.45:0,53,970	1/1:15,1:15:35.57:308,36,0	1/1:10,1:11:9:80,9,0	1/1:4,26:29:19.93:195,20,0	0/0:5,0:5:15:0,15,173	0/0:9,0:9:14.34:0,14,304	0/0:24,0:24:45.67:0,46,623	0/1:10,0:10:5.52:19,0,6	0/0:17,0:17:45.06:0,45,626	1/1:8,1:9:17.88:173,18,0	0/0:5,0:5:15.02:0,15,223
chr10	105812164	.	A	AG	1517.07	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-5.861;DP=388;FS=19.000;HRun=8;HaplotypeScore=47.3310;InbreedingCoeff=0.8817;MQ=64.10;MQ0=9;MQRankSum=-3.848;QD=17.24;ReadPosRankSum=-2.884;VQSLOD=1.5553;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:38.81:0,39,342	1/1:3,3:6:6.02:70,6,0	0/0:39,0:8:16.33:0,16,151	0/0:36,0:14:23.50:0,23,196	0/0:8,0:8:11.99:0,12,105	0/0:11,0:11:13.29:0,13,176	0/0:10,0:10:21.01:0,21,192	1/1:11,27:36:69.50:754,70,0	0/0:5,0:5:12.01:0,12,110	0/0:15,0:15:33.02:0,33,301	0/0:8,0:8:15.01:0,15,137	0/0:11,0:11:23.96:0,24,211	0/0:5,0:5:8.98:0,9,77	0/0:10,0:9:11.99:0,12,105	0/0:13,0:13:16.56:0,17,141	0/0:18,0:17:26.98:0,27,242	0/0:14,0:14:33.01:0,33,302	0/0:17,0:15:26.96:0,27,239	1/1:3,6:8:18.05:208,18,0	1/1:1,2:3:5.88:50,6,0	1/1:4,16:20:39.11:450,39,0	0/0:6,0:6:9:0,9,82	0/0:12,0:13:29.23:0,29,253	0/0:12,0:12:27.01:0,27,245	0/0:12,0:12:26.68:0,27,226	0/0:14,0:14:24.01:0,24,220	1/1:3,9:12:15.02:161,15,0	0/0:6,0:6:8.37:0,8,63
chr10	105812354	.	C	CT	1108.43	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-7.526;DP=331;FS=8.452;HRun=12;HaplotypeScore=34.6333;InbreedingCoeff=0.8783;MQ=60.51;MQ0=2;MQRankSum=-1.042;QD=14.21;ReadPosRankSum=-1.366;VQSLOD=2.6480;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:20:52.68:0,53,373	1/1:1,5:6:9.01:88,9,0	0/0:4,0:2:5.96:0,6,43	0/0:5,0:4:5.91:0,6,40	0/0:11,0:11:23.77:0,24,170	0/0:14,0:14:35.75:0,36,259	0/0:8,0:8:17.88:0,18,131	1/1:11,15:25:41.71:354,42,0	0/0:8,0:9:19.87:0,20,132	0/0:11,0:13:28.07:0,28,188	0/0:10,0:10:26.85:0,27,197	0/0:8,0:8:17.90:0,18,131	0/0:5,0:6:11.74:0,12,78	0/0:9,0:9:20.87:0,21,153	0/0:11,1:12:17.86:0,18,131	0/0:11,1:12:3.62:0,4,188	0/0:22,0:22:44.69:0,45,326	0/0:22,0:23:49.63:0,50,349	1/1:4,11:16:35.82:317,36,0	1/1:1,8:9:23.99:224,24,0	1/1:2,6:8:15.33:132,15,0	0/0:3,0:3:8.95:0,9,65	0/0:6,0:6:11.29:0,11,74	0/0:8,0:8:17.82:0,18,125	0/0:12,0:12:26.83:0,27,197	0/0:16,0:16:38.64:0,39,275	1/1:4,9:13:18.03:175,18,0	0/0:21,0:21:47.72:0,48,350
chr10	105813913	.	CT	C	531.38	PASS	AB=0.891;AC=17;AF=0.304;AN=56;BaseQRankSum=0.655;DP=513;FS=4.979;HRun=16;HaplotypeScore=77.3932;InbreedingCoeff=0.2154;MQ=64.22;MQ0=1;MQRankSum=1.077;QD=2.22;ReadPosRankSum=0.666;VQSLOD=-0.5507;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:9.69:0,10,171	0/0:4,0:4:0:0,0,0	0/0:19,0:12:5.60:0,6,28	0/1:12,1:12:2.03:2,0,43	0/0:18,1:19:27.83:0,28,243	0/0:19,1:21:11.06:0,11,218	0/1:16,2:18:13.80:14,0,103	1/1:15,14:32:15.94:189,16,0	0/0:11,0:11:17.87:0,18,141	0/1:14,3:18:24:24,0,127	0/0:12,1:14:5.77:0,6,142	0/1:19,0:19:12.21:12,0,108	0/0:12,3:15:1.94:0,2,98	0/0:9,1:10:5.95:0,6,44	0/0:19,1:21:15.77:0,16,234	0/1:21,1:23:2.80:3,0,178	0/0:25,0:25:36.93:0,37,334	0/0:21,1:23:24.49:0,24,309	0/1:12,8:21:21.94:103,0,22	1/1:8,13:21:18.29:182,18,0	1/1:5,8:14:20.21:109,20,0	0/1:9,2:11:3.04:3,0,84	0/0:22,3:25:8.85:0,9,172	0/0:20,1:19:5.89:0,6,146	0/0:22,0:21:34.44:0,34,252	0/1:19,2:22:14.25:14,0,93	1/1:7,5:12:5.59:36,6,0	0/1:11,0:10:0.45:0,0,64
chr10	105816835	.	GT	G	1453.16	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.609;DP=504;FS=1.254;HRun=2;HaplotypeScore=44.7761;InbreedingCoeff=0.9769;MQ=62.17;MQ0=13;MQRankSum=0.054;QD=26.42;ReadPosRankSum=-0.296;VQSLOD=3.0479;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.21:0,78,1086	0/0:4,0:4:9.03:0,9,135	0/0:14,0:10:30.08:0,30,427	0/0:14,0:12:29.24:0,29,442	0/0:24,0:23:66.16:0,66,924	1/1:0,18:18:45.15:583,45,0	1/1:5,25:26:45.16:739,45,0	0/0:28,0:27:81.19:0,81,1124	0/0:9,0:9:27.09:0,27,404	0/0:15,0:15:45.15:0,45,666	0/0:20,0:20:57.19:0,57,852	0/0:21,0:21:63.18:0,63,900	0/0:17,0:17:51.16:0,51,741	0/0:15,0:15:42.13:0,42,608	0/0:17,0:17:51.10:0,51,737	0/0:21,0:21:63.19:0,63,904	0/0:33,0:33:96.27:0,96,1374	0/0:20,0:20:57.19:0,57,853	0/0:19,0:15:42.14:0,42,613	0/0:14,0:14:42.14:0,42,629	0/0:17,0:15:39.13:0,39,584	0/0:17,0:17:51.17:0,51,751	0/0:17,0:16:45.14:0,45,653	0/0:21,0:21:53.97:0,54,730	1/1:0,7:7:21.07:272,21,0	0/0:20,0:20:60.19:0,60,867	0/0:9,0:9:27.09:0,27,399	0/0:14,0:13:39.13:0,39,580
chr10	105816921	.	GA	G	2100.42	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=2.881;DP=482;FS=21.189;HRun=1;HaplotypeScore=55.4278;InbreedingCoeff=0.9322;MQ=67.15;MQ0=3;MQRankSum=-2.985;QD=21.65;ReadPosRankSum=-4.976;VQSLOD=1.3438;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.14:0,66,832	1/1:4,0:4:5.19:27,5,0	0/0:28,0:18:2.14:0,2,349	0/0:19,1:7:16.67:0,17,136	0/0:11,0:10:23.95:0,24,283	0/0:21,0:21:59.92:0,60,716	0/0:19,0:19:49.72:0,50,615	1/1:18,10:28:65.86:719,66,0	0/0:8,0:8:24.06:0,24,294	0/0:29,0:29:81.22:0,81,1055	0/0:14,0:14:33.08:0,33,434	0/0:20,0:20:56.99:0,57,645	0/0:14,0:14:39.07:0,39,490	0/0:10,0:10:30.07:0,30,367	0/0:15,0:15:39.11:0,39,496	0/0:18,0:18:49.40:0,49,654	0/0:24,0:23:66.17:0,66,848	0/0:14,0:14:42.09:0,42,539	1/1:16,3:19:43.26:394,43,0	1/1:12,3:14:28.63:282,29,0	1/1:10,1:10:29.88:298,30,0	0/0:13,0:13:33.09:0,33,424	0/0:15,0:15:42.13:0,42,552	0/0:17,0:17:41.86:0,42,505	0/0:11,0:11:33.11:0,33,447	0/0:22,0:22:66.21:0,66,889	1/1:15,5:20:53.96:560,54,0	0/0:15,0:14:35.03:0,35,360
chr10	105817342	.	AAAAAAAAAAAAAG	A	1757.49	PASS	AB=0.958;AC=12;AF=0.214;AN=56;BaseQRankSum=6.821;DP=454;FS=5.468;HRun=0;HaplotypeScore=158.7704;InbreedingCoeff=0.7159;MQ=42.85;MQ0=20;MQRankSum=-2.546;QD=20.68;ReadPosRankSum=2.892;VQSLOD=2.5226;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:99:0,105,3074	1/1:4,2:6:14.94:395,15,0	0/0:24,0:4:12.04:0,12,319	0/1:22,0:9:6.15:6,0,300	0/0:19,0:18:48.16:0,48,1554	0/0:14,0:13:30.10:0,30,950	0/0:9,0:9:24.08:0,24,822	1/1:6,10:15:32.24:394,32,0	0/0:15,0:14:42.14:0,42,1302	0/0:19,0:19:57.20:0,57,1730	0/0:29,0:28:84.27:0,84,2439	0/0:18,0:18:48.16:0,48,1658	0/0:7,0:7:21.06:0,21,856	0/0:16,0:14:39.13:0,39,1285	0/0:12,0:11:33.11:0,33,1376	0/0:14,0:14:36.12:0,36,1458	0/0:24,0:21:54.13:0,54,2072	0/0:27,0:23:69.14:0,69,2427	0/1:10,1:10:60.15:222,0,60	1/1:9,4:11:14.34:410,14,0	1/1:5,0:4:8.83:171,9,0	0/0:9,0:9:24.08:0,24,565	0/0:15,0:15:30.10:0,30,891	0/0:13,0:12:29.13:0,29,913	0/0:10,0:10:18.06:0,18,771	0/0:25,0:25:72.25:0,72,2336	1/1:9,3:12:0.54:324,1,0	0/0:10,0:8:24.08:0,24,643
chr10	105817380	.	A	ACCC	2149.83	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=1.517;DP=394;FS=8.212;HRun=8;HaplotypeScore=85.4392;InbreedingCoeff=0.9471;MQ=81.28;MQ0=3;MQRankSum=-8.319;QD=23.12;ReadPosRankSum=-0.468;VQSLOD=0.8536;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:54.04:0,54,671	1/1:2,7:10:24.08:447,24,0	0/0:26,0:26:68.98:0,69,775	0/0:30,0:25:41.71:0,42,465	0/0:15,0:15:39.10:0,39,511	1/1:1,7:10:15.05:303,15,0	1/1:1,6:8:21.05:361,21,0	1/1:11,0:12:9.03:130,9,0	0/0:15,0:15:36.09:0,36,473	0/0:11,0:11:33.11:0,33,433	0/0:13,0:13:30.09:0,30,393	0/0:17,0:17:39.10:0,39,512	0/0:8,0:8:21.05:0,21,275	0/0:9,0:9:27.09:0,27,355	0/0:19,0:19:54.17:0,54,710	0/0:14,0:13:36.10:0,36,473	0/0:25,0:25:60.16:0,60,786	0/0:25,0:24:72.23:0,72,936	1/1:8,3:11:15.05:259,15,0	1/1:4,1:11:15.05:243,15,0	1/1:4,3:6:3.01:59,3,0	0/0:13,0:13:39.13:0,39,513	0/0:8,0:8:24.08:0,24,313	0/0:8,0:8:24.08:0,24,315	1/1:2,6:9:12.03:190,12,0	0/0:11,0:11:33.11:0,33,433	1/1:5,2:15:24.07:362,24,0	0/0:10,0:10:24.06:0,24,315
chr10	105819551	.	G	GAC	6994.41	PASS	AB=0.703;AC=42;AF=0.778;AN=54;BaseQRankSum=-2.032;DP=697;FS=0.000;HRun=0;HaplotypeScore=103.9317;InbreedingCoeff=-0.1899;MQ=64.68;MQ0=8;MQRankSum=-2.792;QD=11.30;ReadPosRankSum=0.619;VQSLOD=4.5325;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,19:32:24.08:365,24,0	1/1:5,6:11:11.99:156,12,0	./.	0/0:47,0:28:0.94:0,1,3	0/1:7,6:13:15.31:210,0,15	1/1:8,0:21:11.54:90,12,0	1/1:13,0:33:19.49:134,19,0	1/1:39,0:39:37.01:319,37,0	0/1:11,11:23:55.61:375,0,56	0/1:14,6:20:92.53:241,0,93	0/1:8,5:14:46.34:207,0,46	1/1:15,17:33:11.61:604,12,0	0/1:6,7:13:49.24:164,0,49	0/1:8,10:19:39.04:250,0,39	1/1:8,21:29:17.53:697,18,0	0/1:11,10:21:6.53:338,0,7	0/1:20,21:39:74.66:669,0,75	0/1:20,5:25:73.28:225,0,73	1/1:12,1:21:26.87:222,27,0	1/1:7,0:7:5.34:36,5,0	1/1:43,0:43:11.44:97,11,0	0/1:10,4:14:21.60:125,0,22	1/1:5,0:18:11.99:102,12,0	1/1:18,1:48:25.98:503,26,0	1/1:8,0:22:9:78,9,0	1/1:14,14:29:10.81:491,11,0	1/1:6,0:16:18:157,18,0	1/1:5,5:11:9.03:137,9,0
chr10	105820456	.	C	CTTA	10174.82	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-11.827;DP=644;FS=10.253;HRun=0;HaplotypeScore=87.6204;InbreedingCoeff=0.9930;MQ=76.35;MQ0=0;MQRankSum=-7.142;QD=55.60;ReadPosRankSum=-3.643;VQSLOD=5.0655;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,2064	1/1:3,7:10:24.08:484,24,0	0/0:22,0:22:54.18:0,54,861	0/0:19,0:19:50.96:0,51,804	0/0:23,0:23:66.23:0,66,1093	1/1:4,14:18:48.16:1048,48,0	1/1:3,17:20:51.18:1142,51,0	1/1:10,26:38:99:2161,102,0	0/0:21,0:21:54.18:0,54,899	0/0:23,0:23:66.22:0,66,1069	0/0:28,0:28:81.28:0,81,1340	0/0:27,0:27:72.25:0,72,1197	0/0:18,0:18:54.18:0,54,889	0/0:16,0:16:39.13:0,39,650	0/0:33,0:33:93.30:0,93,1524	0/0:30,0:30:81.28:0,81,1348	0/0:24,0:24:66.23:0,66,1099	0/0:19,0:19:57.16:0,57,920	1/1:6,9:16:10.58:784,11,0	1/1:4,17:22:57.15:1193,57,0	1/1:2,23:25:66.18:1354,66,0	0/0:25,0:25:69.24:0,69,1149	0/0:23,0:23:69.24:0,69,1147	0/0:29,0:29:72.25:0,72,1192	1/1:0,14:14:42.14:909,42,0	0/0:24,0:24:69.24:0,69,1140	1/1:3,17:20:51.14:1101,51,0	0/0:12,0:12:36.12:0,36,586
chr10	105820871	.	GA	G	2529.85	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.262;DP=622;FS=1.767;HRun=10;HaplotypeScore=62.3693;InbreedingCoeff=0.9873;MQ=67.99;MQ0=0;MQRankSum=1.131;QD=18.60;ReadPosRankSum=-1.738;VQSLOD=3.7966;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.68:0,85,918	0/0:12,0:12:27.07:0,27,298	0/0:17,0:14:16.81:0,17,198	0/0:13,0:11:14.51:0,15,152	0/0:25,0:25:63.09:0,63,680	0/0:27,0:27:66.16:0,66,716	0/0:12,0:12:36.10:0,36,398	1/1:7,34:41:99:864,102,0	0/0:22,0:22:60.13:0,60,644	0/0:31,0:31:78.21:0,78,857	0/0:25,0:25:55.03:0,55,599	0/0:22,0:22:57.13:0,57,609	0/0:17,0:17:45.01:0,45,468	0/0:18,0:19:50.95:0,51,530	0/0:37,0:37:96.22:0,96,1038	0/0:29,0:29:84.22:0,84,922	0/0:19,0:19:51.12:0,51,555	0/0:12,1:13:13.05:0,13,372	1/1:5,18:23:53.95:463,54,0	1/1:4,23:27:40.11:466,40,0	1/1:1,12:13:32.99:287,33,0	0/0:11,0:11:33.07:0,33,356	0/0:21,0:21:51.09:0,51,537	0/0:17,0:18:47.96:0,48,512	0/0:22,0:21:51.13:0,51,557	0/0:23,1:25:39.88:0,40,609	1/1:4,28:32:71.98:625,72,0	0/0:16,0:16:42.09:0,42,454
chr10	105821176	.	T	TAC	2568.84	PASS	AB=0.913;AC=21;AF=0.375;AN=56;BaseQRankSum=7.389;DP=659;FS=6.869;HRun=0;HaplotypeScore=138.5373;InbreedingCoeff=0.4419;MQ=64.42;MQ0=7;MQRankSum=-3.139;QD=7.26;ReadPosRankSum=-4.266;VQSLOD=1.7545;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:39,1:40:27.52:28,0,347	1/1:3,0:10:26.68:236,27,0	0/0:42,0:27:6.30:0,6,36	0/1:35,0:21:29.32:29,0,106	0/0:17,0:18:44.94:0,45,480	1/1:14,0:18:14.46:112,14,0	1/1:20,0:20:13.42:94,13,0	1/1:27,4:32:30.09:418,30,0	0/0:22,0:23:26.90:0,27,288	0/0:20,0:22:29.74:0,30,303	0/1:19,2:21:50.51:51,0,370	0/1:15,1:17:16.63:17,0,229	0/0:13,0:13:21.04:0,21,230	0/0:19,0:20:35.93:0,36,392	0/0:18,0:18:14.15:0,14,377	0/0:14,0:14:24.07:0,24,275	0/0:26,0:30:41.01:0,41,580	0/0:22,0:22:51.10:0,51,568	1/1:13,0:11:11.36:120,11,0	1/1:20,7:27:23.34:451,23,0	0/1:32,9:40:54.80:549,0,55	0/0:16,0:18:33.12:0,33,319	0/1:16,2:20:7.33:7,0,353	0/0:27,0:28:50.91:0,51,563	1/1:28,0:31:24.74:204,25,0	0/0:30,0:29:38.77:0,39,405	0/1:22,3:24:24.50:452,0,25	0/0:5,0:4:9.01:0,9,93
chr10	105821230	.	CA	C	6538.08	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.253;DP=633;FS=3.454;HRun=2;HaplotypeScore=98.5475;InbreedingCoeff=0.9943;MQ=66.68;MQ0=1;MQRankSum=-3.882;QD=32.37;ReadPosRankSum=-2.067;VQSLOD=3.9931;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1523	1/1:4,8:12:24.08:311,24,0	0/0:32,0:23:63.21:0,63,934	0/0:35,0:29:72.67:0,73,1030	0/0:31,0:31:87.29:0,87,1302	1/1:5,12:17:30.09:388,30,0	1/1:3,12:14:29.97:389,30,0	1/1:3,32:35:90.08:1166,90,0	0/0:18,0:18:54.17:0,54,780	0/0:26,0:26:72.24:0,72,1062	0/0:19,0:19:57.19:0,57,850	0/0:16,0:15:45.15:0,45,674	0/0:15,0:15:45.15:0,45,670	0/0:18,0:18:45.15:0,45,674	0/0:19,0:19:57.19:0,57,849	0/0:12,0:12:14.68:0,15,473	0/0:23,0:23:66.15:0,66,934	0/0:23,0:23:69.15:0,69,984	1/1:1,15:16:45.14:570,45,0	1/1:0,25:25:75.24:969,75,0	1/1:4,21:25:57.17:723,57,0	0/0:22,0:22:63.20:0,63,919	0/0:26,0:26:69.21:0,69,985	0/0:23,0:23:60.16:0,60,870	1/1:3,21:23:57.66:738,58,0	0/0:32,0:32:93.31:0,93,1376	1/1:0,33:33:99:1283,99,0	0/0:5,0:5:15.05:0,15,225
chr10	105821609	.	CA	C	5168.45	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.830;DP=672;FS=10.230;HRun=8;HaplotypeScore=68.1231;InbreedingCoeff=0.9960;MQ=74.53;MQ0=1;MQRankSum=-2.092;QD=24.38;ReadPosRankSum=-0.065;VQSLOD=5.0637;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,117,1399	1/1:3,6:9:15.02:145,15,0	0/0:20,0:20:29.52:0,30,443	0/0:14,0:14:32.83:0,33,351	0/0:21,0:21:51.16:0,51,616	1/1:7,19:26:54.08:521,54,0	1/1:2,24:26:69.11:666,69,0	1/1:4,30:34:87.10:827,87,0	0/0:26,0:26:78.24:0,78,942	0/0:22,0:22:63.19:0,63,759	0/0:16,0:16:43.37:0,43,501	0/0:38,0:38:96.29:0,96,1154	0/0:23,0:23:63.19:0,63,761	0/0:19,0:19:54.16:0,54,648	0/0:42,0:42:99:0,108,1284	0/0:20,0:20:57.15:0,57,667	0/0:26,0:26:75.23:0,75,905	0/0:21,0:21:57.15:0,57,675	1/1:2,26:28:75.11:720,75,0	1/1:2,13:15:36.06:348,36,0	1/1:2,28:30:78.12:753,78,0	0/0:17,0:16:33.09:0,33,389	0/0:18,0:18:54.16:0,54,643	0/0:37,0:37:90.28:0,90,1087	1/1:1,21:22:63.10:608,63,0	0/0:29,0:29:72.22:0,72,869	1/1:1,21:22:60.09:579,60,0	0/0:7,0:7:18.06:0,18,217
chr10	105821701	.	TTTC	T	4498.38	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=7.861;DP=532;FS=13.410;HRun=0;HaplotypeScore=74.8149;InbreedingCoeff=0.9689;MQ=66.00;MQ0=1;MQRankSum=-0.637;QD=27.43;ReadPosRankSum=-2.604;VQSLOD=3.4240;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,105,2022	1/1:5,2:7:15.04:199,15,0	0/0:12,0:11:8.78:0,9,438	0/0:17,0:12:21.30:0,21,309	0/0:15,0:15:36.11:0,36,682	1/1:10,9:19:39.12:541,39,0	1/1:4,14:18:33.11:480,33,0	1/1:8,14:22:41.99:469,42,0	0/0:17,0:17:36.08:0,36,647	0/0:37,0:37:87.13:0,87,1562	0/0:7,0:7:18.06:0,18,366	0/0:17,0:17:33.11:0,33,672	0/0:14,0:14:39.12:0,39,757	0/0:11,0:11:33.11:0,33,633	0/0:25,0:25:63.19:0,63,1190	0/0:13,0:13:27.09:0,27,538	0/0:28,0:28:75.24:0,75,1490	0/0:26,0:26:69.22:0,69,1365	1/1:19,10:29:54.15:710,54,0	1/1:3,8:11:24.05:326,24,0	1/1:8,7:14:36.10:503,36,0	0/0:17,0:17:36.09:0,36,650	0/0:12,0:12:24.04:0,24,447	0/0:30,0:30:84.17:0,84,1589	1/1:5,9:14:42.10:529,42,0	0/0:28,0:28:72.19:0,72,1302	1/1:21,8:29:57.11:740,57,0	0/0:3,0:3:6.02:0,6,122
chr10	105821795	.	TC	T	567.17	PASS	AB=0.922;AC=17;AF=0.315;AN=54;BaseQRankSum=5.451;DP=264;FS=4.369;HRun=12;HaplotypeScore=35.2038;InbreedingCoeff=0.4900;MQ=61.63;MQ0=28;MQRankSum=-0.460;QD=6.52;ReadPosRankSum=-0.021;VQSLOD=0.9254;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:23.03:0,23,186	1/1:5,4:8:17.92:138,18,0	0/0:20,1:5:0.62:0,1,62	0/0:25,1:5:1.47:0,1,41	0/0:3,0:3:6:0,6,55	0/0:5,0:6:5.68:0,6,29	0/0:6,0:6:2.84:0,3,14	1/1:6,2:6:5.95:46,6,0	0/0:2,0:2:3:0,3,29	1/1:8,1:8:4.22:26,4,0	0/0:5,0:5:3.44:0,3,25	0/1:3,0:3:16.90:17,0,24	./.	0/0:5,0:3:6:0,6,55	0/0:8,0:7:12.01:0,12,116	0/0:6,0:5:9.02:0,9,91	0/1:9,4:13:64.25:64,0,114	0/0:18,1:19:25.13:0,25,318	1/1:4,8:12:20.86:156,21,0	1/1:1,2:2:5.98:46,6,0	1/1:9,5:11:14.91:113,15,0	0/0:7,0:7:7.83:0,8,66	0/0:3,0:3:5.91:0,6,40	0/0:20,2:20:9.90:0,10,273	0/1:7,0:7:0:0,0,0	0/0:6,0:6:6.01:0,6,58	1/1:5,4:9:17.84:128,18,0	0/0:10,0:8:18.02:0,18,171
chr10	105822175	.	TTA	T	39.51	PASS	AB=0.700;AC=1;AF=0.019;AN=52;BaseQRankSum=1.124;DP=192;FS=0.000;HRun=0;HaplotypeScore=95.6858;InbreedingCoeff=0.0978;MQ=36.76;MQ0=11;MQRankSum=-1.927;QD=5.64;ReadPosRankSum=0.432;VQSLOD=2.8381;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:3:6.02:0,6,97	0/0:1,0:1:3.01:0,3,61	./.	0/0:2,0:1:3.01:0,3,40	0/0:7,0:7:21.07:0,21,354	0/0:10,0:9:24.08:0,24,456	0/0:10,1:9:21.07:0,21,426	0/0:15,0:14:42.14:0,42,853	0/0:7,0:7:17.97:0,18,258	0/1:4,3:6:99:113,0,165	0/0:5,0:5:12.04:0,12,195	0/0:9,0:9:24.07:0,24,428	0/0:3,0:3:9.03:0,9,178	0/0:9,0:9:24.04:0,24,354	0/0:12,0:12:30.10:0,30,560	0/0:8,0:7:18.02:0,18,282	0/0:15,0:13:33.11:0,33,648	0/0:5,0:5:15.05:0,15,282	0/0:7,0:6:15.05:0,15,304	0/0:4,0:3:5.98:0,6,57	./.	0/0:0,1:1:0:0,0,0	0/0:5,2:6:12.04:0,12,191	0/0:8,0:5:9.03:0,9,180	0/0:5,3:8:12:0,12,179	0/0:9,1:9:6.54:0,7,387	0/0:11,0:11:27.05:0,27,411	0/0:2,1:3:6.02:0,6,122
chr10	105825486	.	TCA	T	130.01	PASS	AB=0.936;AC=9;AF=0.180;AN=50;BaseQRankSum=1.789;DP=520;FS=4.456;HRun=0;HaplotypeScore=80.7219;InbreedingCoeff=0.0543;MQ=63.94;MQ0=16;MQRankSum=-1.534;QD=0.87;ReadPosRankSum=1.829;VQSLOD=1.4306;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:11.63:0,12,134	0/0:3,0:3:3:0,3,25	./.	./.	0/0:9,0:9:3.01:0,3,40	0/0:14,0:13:0:0,0,0	1/1:21,0:24:8.53:57,9,0	./.	0/1:25,0:23:20.22:20,0,78	0/0:18,0:18:16.15:0,16,126	0/0:12,0:12:2.99:0,3,25	0/0:27,0:27:0.14:0,0,98	0/0:13,0:12:6:0,6,67	0/1:21,0:21:41.43:41,0,77	0/0:24,0:24:11.85:0,12,108	0/0:23,0:23:12.03:0,12,144	0/0:25,0:25:12.04:0,12,174	0/0:13,0:13:6.02:0,6,87	0/0:10,0:10:3.01:0,3,39	0/0:13,0:13:9.02:0,9,108	0/0:29,0:29:8.98:0,9,86	0/0:18,0:18:9.01:0,9,108	0/1:14,1:16:32.35:36,0,32	0/1:24,6:28:70.55:71,0,165	1/1:11,0:11:2.68:11,3,0	0/1:21,1:22:19.62:20,0,67	0/0:14,0:15:6.01:0,6,67	0/0:12,0:12:12.02:0,12,152
chr10	105825969	.	A	AGCGT	8754.23	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-6.030;DP=476;FS=4.756;HRun=0;HaplotypeScore=77.4106;InbreedingCoeff=0.8987;MQ=83.81;MQ0=0;MQRankSum=-6.796;QD=52.74;ReadPosRankSum=-1.892;VQSLOD=5.3569;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,2048	1/1:1,4:5:9.03:246,9,0	0/0:17,0:17:45.15:0,45,847	0/0:19,0:21:55.03:0,55,905	0/0:9,0:9:27.09:0,27,523	1/1:1,9:11:24.08:655,24,0	1/1:4,22:29:51.18:1395,51,0	1/1:9,11:24:63.17:1462,63,0	0/0:19,0:19:54.17:0,54,981	0/0:13,0:13:39.13:0,39,756	0/0:3,0:3:9.03:0,9,175	0/0:21,0:21:60.17:0,60,1076	0/0:15,0:15:42.13:0,42,771	0/0:21,0:21:60.18:0,60,1089	0/0:10,0:10:30.10:0,30,581	0/0:17,0:17:51.15:0,51,916	0/0:38,0:38:99:0,111,2132	0/0:14,0:14:42.06:0,42,736	1/1:3,6:11:27.06:638,27,0	1/1:0,6:7:18.06:469,18,0	1/1:4,29:34:84.29:2284,84,0	0/0:15,0:15:39.13:0,39,755	0/0:12,0:12:36.12:0,36,691	0/0:20,0:20:51.17:0,51,975	1/1:3,4:7:9.03:236,9,0	0/1:13,0:13:5.88:6,0,658	1/1:4,16:22:50.47:1364,50,0	0/0:3,0:3:9.03:0,9,175
chr10	105826975	.	AAAAAGAG	A	364.89	PASS	AB=0.900;AC=6;AF=0.107;AN=56;BaseQRankSum=5.352;DP=485;FS=4.271;HRun=0;HaplotypeScore=106.7120;InbreedingCoeff=0.1524;MQ=54.72;MQ0=18;MQRankSum=2.799;QD=4.50;ReadPosRankSum=2.762;VQSLOD=1.8900;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:36:84.05:0,84,1756	0/0:6,0:5:9.93:0,10,101	0/0:25,0:10:29.52:0,30,373	0/0:13,0:7:14.51:0,15,180	0/0:14,0:13:27.89:0,28,329	0/0:4,7:11:2.96:0,3,19	1/1:2,8:9:5.91:120,6,0	0/1:25,0:25:88.60:89,0,326	0/0:11,0:11:32.78:0,33,513	0/0:25,0:24:57.10:0,57,1145	0/0:21,0:20:55.16:0,55,1102	0/0:15,0:13:32.98:0,33,561	0/0:10,0:10:29.93:0,30,583	0/0:14,0:14:39.82:0,40,759	0/0:16,0:16:43.26:0,43,877	0/0:17,0:17:35.04:0,35,549	0/0:33,0:31:76.21:0,76,1351	0/0:24,0:23:53.42:0,53,1111	0/1:21,0:21:99:137,0,281	0/1:13,0:13:21.22:21,0,118	0/0:8,0:8:4.90:0,5,20	0/0:11,0:11:31.60:0,32,755	0/0:14,0:14:37.19:0,37,848	0/0:25,0:25:33.07:0,33,954	0/1:4,8:12:10.34:119,0,10	0/0:27,0:26:73.38:0,73,1319	0/0:17,0:16:3.04:0,3,237	0/0:7,0:7:20.49:0,20,336
chr10	105826979	.	AGAG	A	1566.65	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=-0.832;DP=433;FS=19.868;HRun=0;HaplotypeScore=68.5017;InbreedingCoeff=0.8629;MQ=59.38;MQ0=9;MQRankSum=-3.990;QD=15.99;ReadPosRankSum=-5.312;VQSLOD=0.7629;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:31.19:0,31,953	1/1:0,4:4:4.33:24,4,0	0/0:26,0:11:26.20:0,26,305	0/0:14,0:8:17.46:0,17,203	0/0:12,0:12:12.71:0,13,232	./.	1/1:8,0:8:6:53,6,0	1/1:4,18:24:52.36:637,52,0	0/0:9,0:9:19.71:0,20,343	0/0:21,0:20:50.56:0,51,789	0/0:22,0:21:45.04:0,45,820	0/0:12,0:11:9.19:0,9,366	0/0:9,0:9:13.03:0,13,268	0/0:14,0:14:11.48:0,11,448	0/0:12,0:12:26.55:0,27,469	0/0:8,0:13:17.32:0,17,280	0/0:31,0:30:31.85:0,32,743	0/0:19,0:19:21.63:0,22,553	1/1:7,12:19:18.01:408,18,0	1/1:2,10:12:26.15:315,26,0	1/1:3,6:9:3.48:49,3,0	0/0:10,0:10:26.22:0,26,450	0/0:14,0:15:28.19:0,28,515	0/0:23,0:24:39.10:0,39,646	1/1:10,0:10:6.01:60,6,0	0/0:25,0:26:14.34:0,14,685	1/1:12,0:11:15.48:204,15,0	0/0:5,0:5:8.79:0,9,155
chr10	105827182	.	G	GA	727.69	PASS	AB=0.957;AC=7;AF=0.125;AN=56;BaseQRankSum=-3.698;DP=474;FS=0.732;HRun=8;HaplotypeScore=47.6635;InbreedingCoeff=0.7926;MQ=75.04;MQ0=0;MQRankSum=0.426;QD=12.13;ReadPosRankSum=1.838;VQSLOD=2.1847;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.03:0,75,686	0/0:5,0:5:12.01:0,12,110	0/0:18,0:13:11.88:0,12,87	0/1:21,0:18:42.42:42,0,201	0/0:21,0:21:51.02:0,51,466	1/1:1,14:15:30.09:346,30,0	1/1:0,9:9:12.04:139,12,0	0/0:29,0:29:63:0,63,570	0/0:17,0:17:44.99:0,45,402	0/0:25,0:25:60.02:0,60,549	0/0:12,0:12:30.01:0,30,275	0/0:12,0:12:30:0,30,269	0/0:16,0:16:41.99:0,42,379	0/0:17,0:17:48.01:0,48,435	0/0:17,0:17:45.02:0,45,412	0/0:18,0:18:48.02:0,48,439	0/0:19,1:20:16.40:0,16,404	0/0:25,0:25:57.01:0,57,522	0/0:21,0:21:48:0,48,432	0/0:19,0:19:54.03:0,54,494	0/0:12,0:12:36.02:0,36,329	0/0:11,0:11:26.99:0,27,243	0/0:17,0:17:48.03:0,48,439	0/0:8,0:8:11.99:0,12,110	1/1:1,13:14:30.09:346,30,0	0/0:23,0:24:62.06:0,62,555	0/0:18,0:18:48.03:0,48,439	0/0:5,0:5:15.01:0,15,137
chr10	105827661	.	TA	T	707.69	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=0.102;DP=383;FS=0.000;HRun=3;HaplotypeScore=54.3261;InbreedingCoeff=0.6894;MQ=59.29;MQ0=6;MQRankSum=-1.017;QD=7.08;ReadPosRankSum=-1.347;VQSLOD=0.0940;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:71.31:0,71,676	1/1:0,3:3:3.01:36,3,0	0/0:10,0:4:5.98:0,6,54	0/1:14,0:3:8.97:9,0,39	0/0:17,0:17:42.03:0,42,425	0/0:10,0:10:20.46:0,20,108	0/0:10,0:9:15.20:0,15,76	1/1:16,3:17:7.89:173,8,0	0/0:18,0:18:39.71:0,40,417	0/0:15,0:15:41.14:0,41,404	0/0:10,0:9:18.41:0,18,166	0/0:10,0:10:26.59:0,27,239	0/0:11,0:11:9.88:0,10,87	0/0:2,0:2:6.02:0,6,72	0/0:16,0:16:36.91:0,37,359	0/0:10,0:10:26.06:0,26,271	0/0:23,0:22:62.89:0,63,680	0/0:18,0:18:41.66:0,42,375	1/1:20,2:20:7.14:214,7,0	1/1:12,2:14:7.66:149,8,0	0/0:5,1:5:1.36:0,1,3	0/0:4,0:4:8.99:0,9,92	0/0:9,0:9:17.91:0,18,170	0/0:9,1:10:7.16:0,7,221	0/0:15,0:15:29.50:0,30,149	0/0:18,0:18:35.55:0,36,353	1/1:25,3:28:16.49:279,16,0	0/0:9,0:9:23.41:0,23,242
chr10	105827853	.	G	GA	2287.44	PASS	AB=0.952;AC=21;AF=0.375;AN=56;BaseQRankSum=1.492;DP=408;FS=2.011;HRun=10;HaplotypeScore=46.8903;InbreedingCoeff=0.7689;MQ=67.16;MQ0=0;MQRankSum=0.938;QD=13.78;ReadPosRankSum=0.063;VQSLOD=3.2280;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:68.89:0,69,566	1/1:3,0:7:17.23:91,17,0	0/1:7,0:4:26.24:26,0,40	0/0:15,0:12:14.09:0,14,127	0/0:14,0:14:41.95:0,42,345	1/1:3,1:15:25.60:128,26,0	1/1:4,3:18:40.34:253,40,0	1/1:12,10:22:33.07:352,33,0	0/0:16,0:16:38.94:0,39,320	0/0:11,0:11:32.96:0,33,271	0/0:19,0:19:50.94:0,51,419	0/0:13,0:13:35.94:0,36,296	0/1:7,0:7:15.57:16,0,82	0/0:7,0:7:20.97:0,21,172	0/0:12,0:12:29.95:0,30,244	0/0:13,0:13:35.96:0,36,296	0/0:15,0:15:44.95:0,45,369	0/0:18,0:18:35.94:0,36,295	1/1:9,11:19:30.31:375,30,0	1/1:5,16:21:51.13:543,51,0	1/1:6,6:11:24.02:243,24,0	0/1:5,1:6:14.01:14,0,105	0/0:8,0:8:17.97:0,18,148	0/0:16,0:16:35.95:0,36,296	1/1:1,0:14:22.76:114,23,0	0/0:25,0:25:50.02:0,50,523	1/1:7,10:17:33.08:345,33,0	0/0:10,0:10:26.97:0,27,221
chr10	105827895	.	A	AT	2427.02	PASS	AB=0.600;AC=11;AF=0.196;AN=56;BaseQRankSum=-5.377;DP=418;FS=1.550;HRun=9;HaplotypeScore=46.0619;InbreedingCoeff=0.8704;MQ=61.93;MQ0=1;MQRankSum=-0.910;QD=23.56;ReadPosRankSum=-2.455;VQSLOD=3.4436;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:95.96:0,96,830	1/1:0,9:9:27.07:299,27,0	0/0:4,0:2:3:0,3,26	0/0:8,0:7:14.81:0,15,113	0/0:29,0:29:83.97:0,84,726	0/0:18,0:18:41.72:0,42,350	0/0:15,0:15:41.91:0,42,356	1/1:8,27:35:81.19:872,81,0	0/0:13,0:13:32.97:0,33,282	0/0:19,0:19:41.96:0,42,363	0/0:21,0:21:59.96:0,60,513	0/0:11,0:11:29.99:0,30,260	0/0:8,0:8:24:0,24,208	0/0:9,0:9:26.99:0,27,234	0/0:13,0:13:38.99:0,39,338	0/0:11,0:11:14.05:0,14,196	0/0:14,0:14:41.97:0,42,359	0/0:18,0:18:53.99:0,54,469	1/1:3,13:16:21.78:370,22,0	1/1:6,17:23:48.13:531,48,0	0/1:3,6:8:5:169,0,5	0/0:8,0:8:24:0,24,208	0/0:7,0:7:21:0,21,182	0/0:12,0:12:26.99:0,27,234	0/0:12,0:12:29.99:0,30,260	0/0:20,0:20:50.66:0,51,428	1/1:1,10:11:33.09:365,33,0	0/0:9,0:9:26.99:0,27,233
chr10	105828813	.	TTTC	T	1496.78	PASS	AB=0.964;AC=14;AF=0.250;AN=56;BaseQRankSum=10.762;DP=609;FS=6.761;HRun=0;HaplotypeScore=102.6897;InbreedingCoeff=0.7856;MQ=59.32;MQ0=16;MQRankSum=-3.641;QD=9.98;ReadPosRankSum=-2.623;VQSLOD=2.0049;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.28:0,81,1655	1/1:4,1:5:14.54:130,15,0	0/0:43,0:17:29.49:0,29,436	0/0:33,0:12:29.43:0,29,502	0/0:27,0:27:78.16:0,78,1522	0/1:18,0:18:48.69:49,0,195	0/0:15,0:15:5.33:0,5,216	1/1:38,1:38:96.70:544,97,0	0/0:18,0:18:51.15:0,51,1005	0/0:24,0:24:72.24:0,72,1376	0/0:13,0:13:39.13:0,39,781	0/0:18,0:18:54.17:0,54,1056	0/0:15,0:15:45.15:0,45,913	0/0:17,0:17:51.11:0,51,841	0/0:20,0:20:57.20:0,57,1179	0/0:22,0:22:66.23:0,66,1327	0/0:41,0:41:99:0,114,2226	0/0:20,0:20:60.17:0,60,1162	1/1:21,1:21:46.14:297,46,0	1/1:14,1:15:25.13:168,25,0	1/1:15,1:16:24.48:161,24,0	0/0:27,0:27:78.22:0,78,1501	0/0:17,0:17:45.13:0,45,882	0/0:28,0:28:81.25:0,81,1573	0/1:12,1:13:49.41:49,0,183	0/0:23,0:23:66.21:0,66,1241	1/1:21,1:22:39.63:288,40,0	0/0:10,0:10:27.09:0,27,547
chr10	105828814	.	TTC	T	3955.18	PASS	AB=0.967;AC=15;AF=0.268;AN=56;BaseQRankSum=6.133;DP=603;FS=5.476;HRun=0;HaplotypeScore=82.5345;InbreedingCoeff=0.7232;MQ=58.46;MQ0=16;MQRankSum=-3.824;QD=24.72;ReadPosRankSum=-3.225;VQSLOD=3.1188;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.28:0,81,1327	1/1:1,4:5:15.04:205,15,0	0/0:43,0:16:29.28:0,29,352	0/0:33,0:12:28.98:0,29,407	0/0:27,0:27:78.14:0,78,1232	0/1:16,2:18:88.09:136,0,88	0/1:15,0:15:63.80:64,0,92	1/1:7,31:37:99:1433,102,0	0/0:18,0:18:51.15:0,51,811	0/0:24,0:24:72.22:0,72,1106	0/0:13,0:13:39.13:0,39,633	0/0:18,0:18:54.16:0,54,846	0/0:15,0:15:45.15:0,45,742	0/0:17,0:17:51.05:0,51,695	0/0:20,0:20:57.19:0,57,946	0/0:23,0:23:69.21:0,69,1085	0/0:40,0:40:99:0,114,1818	0/0:20,0:20:60.17:0,60,944	1/1:2,20:21:51.08:656,51,0	1/1:1,12:13:32.97:399,33,0	1/1:2,13:15:29.83:396,30,0	0/0:27,0:27:78.21:0,78,1220	0/0:18,0:18:48.10:0,48,732	0/0:28,0:28:81.18:0,81,1250	0/1:13,0:13:79.47:81,0,79	0/0:22,0:22:66.20:0,66,1006	1/1:4,17:21:44.89:585,45,0	0/0:10,0:10:27.09:0,27,439
chr10	105828815	.	TC	T	2457.95	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.541;DP=597;FS=5.437;HRun=1;HaplotypeScore=75.1476;InbreedingCoeff=0.9774;MQ=56.65;MQ0=17;MQRankSum=-4.128;QD=15.66;ReadPosRankSum=-3.079;VQSLOD=2.4620;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.25:0,78,1006	1/1:5,0:5:14.93:113,15,0	0/0:41,0:14:19.67:0,20,251	0/0:33,0:12:28.56:0,29,320	0/0:28,0:28:81.12:0,81,996	1/1:18,0:18:16.56:160,17,0	1/1:10,5:15:10.88:238,11,0	1/1:37,0:36:99:784,102,0	0/0:17,0:17:51.14:0,51,631	0/0:24,0:24:72.21:0,72,883	0/0:13,0:13:39.06:0,39,484	0/0:18,0:18:54.15:0,54,668	0/0:15,0:15:45.15:0,45,577	0/0:17,0:17:50.97:0,51,552	0/0:20,0:20:57.19:0,57,736	0/0:23,0:23:69.18:0,69,851	0/0:40,0:40:99:0,117,1433	0/0:21,0:21:63.15:0,63,768	1/1:21,0:20:50.79:390,51,0	1/1:13,0:13:32.80:244,33,0	1/1:14,1:15:29.89:245,30,0	0/0:26,0:26:78.21:0,78,967	0/0:17,0:16:48.11:0,48,572	0/0:27,0:27:81.17:0,81,982	1/1:12,1:13:8.25:140,8,0	0/0:23,0:23:69.18:0,69,821	1/1:18,2:20:44.80:355,45,0	0/0:10,0:10:27.09:0,27,347
chr10	105829473	.	CAT	C	1629.71	PASS	AB=0.750;AC=10;AF=0.179;AN=56;BaseQRankSum=4.306;DP=468;FS=3.847;HRun=0;HaplotypeScore=70.1007;InbreedingCoeff=0.8205;MQ=66.62;MQ0=19;MQRankSum=0.893;QD=20.12;ReadPosRankSum=-2.735;VQSLOD=2.9063;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.14:0,54,801	0/1:4,0:4:2.72:77,0,3	0/0:39,0:22:27.12:0,27,749	0/0:65,0:31:46.61:0,47,708	0/0:16,0:16:42.14:0,42,680	0/0:8,0:6:8.91:0,9,143	0/0:15,0:15:30.57:0,31,476	1/1:2,15:17:45.15:649,45,0	0/0:10,0:10:21.07:0,21,338	0/0:18,0:18:48.16:0,48,836	0/0:18,0:18:45.15:0,45,722	0/0:13,0:13:36.12:0,36,549	0/0:9,0:9:27.09:0,27,381	0/0:13,0:13:30.10:0,30,478	0/0:20,0:20:60.20:0,60,974	0/0:14,0:14:36.12:0,36,578	0/0:12,0:12:30.10:0,30,463	0/0:17,0:17:45.62:0,46,680	1/1:4,10:12:27.09:382,27,0	1/1:3,9:12:2.93:35,3,0	1/1:25,0:25:45.15:641,45,0	0/0:7,0:7:18.06:0,18,301	0/0:14,0:14:33.11:0,33,546	0/0:21,0:21:45.15:0,45,708	0/0:10,0:9:18.04:0,18,249	0/0:19,0:19:57.19:0,57,969	0/1:0,9:9:0:0,0,0	0/0:8,0:7:21.07:0,21,337
chr10	105829885	.	T	TA	840.67	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-4.849;DP=585;FS=6.642;HRun=10;HaplotypeScore=64.1279;InbreedingCoeff=0.9801;MQ=70.95;MQ0=1;MQRankSum=-0.213;QD=19.55;ReadPosRankSum=-0.218;VQSLOD=4.2833;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:83.82:0,84,681	0/0:9,0:9:23.96:0,24,195	0/0:22,0:17:20.05:0,20,182	0/0:21,0:15:17.91:0,18,152	0/0:32,0:33:79.87:0,80,637	1/1:0,23:23:57.14:607,57,0	1/1:4,9:13:24.06:256,24,0	0/0:41,0:40:89.76:0,90,728	0/0:28,0:28:71.89:0,72,589	0/0:32,0:32:83.89:0,84,688	0/0:24,0:24:53.91:0,54,442	0/0:13,0:14:31.95:0,32,247	0/0:16,0:16:47.92:0,48,389	0/0:14,0:14:32.95:0,33,271	0/0:27,0:27:71.85:0,72,582	0/0:19,0:19:50.91:0,51,415	0/0:24,0:24:62.84:0,63,508	0/0:16,0:16:44.30:0,44,349	0/0:23,0:24:55.91:0,56,438	0/0:26,0:26:62.86:0,63,508	0/0:9,0:9:20.97:0,21,172	0/0:13,0:14:40.99:0,41,326	0/0:16,0:16:35.90:0,36,287	0/0:20,0:20:47.92:0,48,390	1/1:2,5:7:12:117,12,0	0/0:30,0:30:77.84:0,78,630	0/0:20,0:21:46.94:0,47,369	0/0:8,0:8:23.97:0,24,197
chr10	105831730	.	CCT	C	920.80	PASS	AB=0.987;AC=15;AF=0.268;AN=56;BaseQRankSum=9.887;DP=555;FS=5.312;HRun=0;HaplotypeScore=79.0732;InbreedingCoeff=0.7028;MQ=81.14;MQ0=0;MQRankSum=-0.377;QD=6.82;ReadPosRankSum=-1.691;VQSLOD=2.1935;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.19:0,69,1082	1/1:2,11:13:30.04:373,30,0	0/0:22,0:22:56.28:0,56,643	0/0:15,0:14:32.28:0,32,511	0/0:38,0:38:99:0,108,1595	0/1:12,0:12:13.83:28,0,14	0/1:23,1:24:92.40:92,0,131	1/1:14,1:15:24.35:157,24,0	0/0:26,0:26:78.18:0,78,1208	0/0:20,0:20:60.14:0,60,829	0/0:21,0:21:60.16:0,60,929	0/0:24,0:24:63.13:0,63,908	0/0:18,0:18:48.12:0,48,733	0/0:17,0:17:47.84:0,48,675	0/0:29,0:29:84.17:0,84,1308	0/0:17,0:17:48.16:0,48,806	0/0:28,0:28:81.24:0,81,1316	0/0:25,0:25:66.20:0,66,1087	1/1:12,0:11:4.57:93,5,0	1/1:13,2:15:26.53:160,27,0	1/1:22,0:22:22.60:78,23,0	0/0:21,0:21:60:0,60,887	0/0:18,0:18:54.14:0,54,836	0/0:23,0:23:66.18:0,66,1040	0/1:10,0:10:11.73:12,0,65	0/0:26,0:26:69.11:0,69,1063	1/1:11,1:12:24.48:116,24,0	0/0:5,0:5:12:0,12,172
chr10	105831731	.	CT	C	2139.45	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=8.826;DP=555;FS=11.412;HRun=1;HaplotypeScore=63.8836;InbreedingCoeff=0.8671;MQ=81.90;MQ0=0;MQRankSum=1.453;QD=16.46;ReadPosRankSum=-2.374;VQSLOD=2.0760;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.14:0,78,980	1/1:13,0:13:9.16:124,9,0	0/0:23,0:23:34.83:0,35,475	0/0:15,0:14:32.17:0,32,436	0/0:38,0:38:99:0,102,1335	1/1:9,1:10:7.25:107,7,0	1/1:20,3:23:9.24:286,9,0	1/1:1,12:13:32.98:349,33,0	0/0:26,0:26:78.17:0,78,1009	0/0:21,0:21:63.11:0,63,739	0/0:22,0:22:63.15:0,63,796	0/0:23,0:23:66.09:0,66,793	0/0:19,0:19:57.11:0,57,704	0/0:17,0:17:38.96:0,39,562	0/0:29,0:29:87.22:0,87,1131	0/0:17,0:17:51.16:0,51,685	0/0:29,0:29:87.20:0,87,1136	0/0:23,0:23:66.19:0,66,899	1/1:7,6:12:1.60:273,2,0	1/1:2,12:14:33.29:366,33,0	1/1:1,21:22:7.35:375,7,0	0/0:22,0:22:58.52:0,59,741	0/0:19,0:19:56.51:0,57,711	0/0:23,0:23:69.19:0,69,910	0/1:10,0:10:0.88:62,0,1	0/0:26,0:26:66.66:0,67,877	1/1:1,11:12:29.93:388,30,0	0/0:5,0:5:12:0,12,145
chr10	105832170	.	GA	G	6718.64	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.259;DP=542;FS=1.109;HRun=2;HaplotypeScore=52.2997;InbreedingCoeff=0.9994;MQ=82.11;MQ0=0;MQRankSum=-2.919;QD=37.53;ReadPosRankSum=-1.632;VQSLOD=4.6466;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.18:0,60,934	1/1:0,10:10:24.08:336,24,0	0/0:20,0:20:59.53:0,60,867	0/0:14,0:14:36.12:0,36,556	0/0:28,0:28:81.26:0,81,1268	1/1:0,21:21:54.18:755,54,0	1/1:0,15:15:42.14:588,42,0	1/1:0,28:28:84.28:1169,84,0	0/0:19,0:19:57.19:0,57,907	0/0:18,0:18:54.17:0,54,824	0/0:15,0:15:45.14:0,45,693	0/0:18,0:18:54.18:0,54,862	0/0:19,0:19:57.19:0,57,910	0/0:11,0:11:33.11:0,33,528	0/0:24,0:24:72.25:0,72,1151	0/0:21,0:21:63.20:0,63,982	0/0:30,0:30:87.28:0,87,1362	0/0:17,0:17:51.17:0,51,815	1/1:0,20:20:57.17:777,57,0	1/1:0,18:18:45.15:623,45,0	1/1:0,18:18:51.17:713,51,0	0/0:9,0:9:27.09:0,27,432	0/0:16,0:16:48.15:0,48,744	0/0:22,0:22:66.22:0,66,1049	1/1:0,19:19:45.15:629,45,0	0/0:30,0:30:90.30:0,90,1418	1/1:0,30:30:81.27:1129,81,0	0/0:11,0:11:33.11:0,33,527
chr10	105832364	.	T	TCC	2754.99	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=10.296;DP=441;FS=5.153;HRun=7;HaplotypeScore=72.2720;InbreedingCoeff=0.9366;MQ=69.47;MQ0=1;MQRankSum=-2.590;QD=20.26;ReadPosRankSum=-1.386;VQSLOD=1.5919;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.17:0,72,811	1/1:2,0:5:11.98:107,12,0	0/0:19,0:16:19.59:0,20,312	0/1:16,0:11:3.12:3,0,171	0/0:16,0:16:45.12:0,45,512	1/1:3,0:11:27.70:108,28,0	1/1:2,0:9:19.84:70,20,0	1/1:7,7:13:27.06:373,27,0	0/0:11,0:10:27.06:0,27,303	0/0:21,0:21:60.16:0,60,679	0/0:14,0:14:39.06:0,39,428	0/0:19,0:19:47.66:0,48,547	0/0:17,0:17:45.13:0,45,523	0/0:14,0:14:36.10:0,36,418	0/0:12,0:12:30.09:0,30,348	0/0:14,0:14:35.96:0,36,388	0/0:21,0:21:51.10:0,51,569	0/0:25,0:25:72.21:0,72,838	1/1:3,7:7:21.02:291,21,0	1/1:3,8:11:18.06:283,18,0	1/1:11,14:25:48.11:732,48,0	0/0:11,0:11:33.10:0,33,383	0/0:14,0:14:30.08:0,30,348	0/0:10,0:10:27.08:0,27,313	1/1:0,0:16:32.44:114,32,0	0/0:24,0:24:66.17:0,66,752	1/1:0,18:19:54.18:886,54,0	0/0:14,0:15:44.85:0,45,489
chr10	105832395	.	TA	T	2455.40	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=11.437;DP=357;FS=1.052;HRun=7;HaplotypeScore=42.4157;InbreedingCoeff=0.8728;MQ=60.25;MQ0=3;MQRankSum=-5.211;QD=18.89;ReadPosRankSum=-1.582;VQSLOD=2.6554;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:48.15:0,48,594	1/1:0,4:4:12.03:122,12,0	0/1:5,0:3:1.45:1,0,19	0/1:7,0:4:0:0,0,0	0/0:12,0:12:36.06:0,36,388	1/1:0,17:17:39.08:396,39,0	1/1:2,3:5:9.02:91,9,0	1/1:5,12:14:39:369,39,0	0/0:6,0:5:15.05:0,15,186	0/0:22,0:22:57.14:0,57,672	0/0:14,0:14:30.08:0,30,359	0/0:15,0:15:23.97:0,24,297	0/0:13,0:13:30.04:0,30,353	0/0:9,0:9:27.06:0,27,312	0/0:9,0:9:24.06:0,24,285	0/0:11,0:11:30.08:0,30,359	0/0:15,0:15:30.09:0,30,372	0/0:27,0:27:59.85:0,60,689	1/1:5,16:17:42.02:405,42,0	1/1:1,11:12:30.06:300,30,0	1/1:2,4:6:9.02:91,9,0	0/0:5,0:5:9.02:0,9,99	0/0:5,0:5:12.02:0,12,136	0/0:3,0:3:6.02:0,6,74	1/1:1,16:17:39.08:395,39,0	0/0:27,0:27:75.18:0,75,863	1/1:1,17:18:48.10:487,48,0	0/0:10,0:10:21.07:0,21,260
chr10	105833110	.	AT	A	3534.73	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=8.475;DP=318;FS=23.593;HRun=2;HaplotypeScore=50.4818;InbreedingCoeff=0.8432;MQ=84.09;MQ0=0;MQRankSum=-1.225;QD=25.99;ReadPosRankSum=5.367;VQSLOD=1.9158;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.04:0,60,626	1/1:1,1:2:3.01:39,3,0	0/1:19,0:18:8.92:9,0,315	0/0:10,0:8:17.98:0,18,177	0/0:13,0:13:3:0,3,221	1/1:11,0:11:32.72:244,33,0	1/1:8,0:9:23.94:192,24,0	1/1:0,24:24:72.15:835,72,0	0/0:8,0:8:20.24:0,20,212	0/0:13,0:13:34.60:0,35,407	0/0:9,0:9:13.57:0,14,201	0/0:13,0:13:27.02:0,27,286	0/0:7,0:7:18.03:0,18,226	0/0:5,0:5:12.78:0,13,108	0/0:10,0:10:27.05:0,27,325	0/0:5,0:5:15.02:0,15,198	0/0:12,0:12:33.07:0,33,407	0/0:8,0:8:14.98:0,15,158	1/1:0,14:14:42.07:503,42,0	1/1:0,18:19:54.06:653,54,0	1/1:3,8:11:30.03:339,30,0	0/0:11,0:11:29.98:0,30,312	0/0:10,0:10:24.41:0,24,259	0/0:6,0:6:14.97:0,15,158	1/1:10,1:12:32.89:261,33,0	0/0:12,0:12:24.97:0,25,273	1/1:2,12:15:36.12:459,36,0	0/0:6,0:5:6.41:0,6,62
chr10	105833111	.	TTC	T	2487.76	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=9.130;DP=318;FS=24.570;HRun=0;HaplotypeScore=58.7657;InbreedingCoeff=0.8429;MQ=85.22;MQ0=0;MQRankSum=-1.487;QD=18.57;ReadPosRankSum=5.836;VQSLOD=1.4036;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.12:0,60,854	1/1:1,0:1:2.98:21,3,0	0/1:19,0:18:32.99:33,0,389	0/0:11,0:9:18:0,18,211	0/0:12,0:12:35.33:0,35,356	1/1:3,7:11:32.85:398,33,0	1/1:5,4:9:23.80:312,24,0	1/1:24,0:24:70.88:527,71,0	0/0:9,0:9:24.05:0,24,329	0/0:13,0:13:36.02:0,36,533	0/0:9,0:9:20.98:0,21,276	0/0:13,0:13:33.01:0,33,400	0/0:7,0:7:18.04:0,18,305	0/0:5,0:5:14.87:0,15,158	0/0:10,0:10:27.06:0,27,422	0/0:5,0:5:15.02:0,15,261	0/0:12,0:12:33.09:0,33,552	0/0:8,0:8:17.95:0,18,210	1/1:14,0:14:39.26:269,39,0	1/1:20,0:20:50.07:282,50,0	1/1:11,0:11:29.81:217,30,0	0/0:12,0:12:33.01:0,33,453	0/0:10,0:10:18.43:0,18,324	0/0:6,0:6:15.03:0,15,225	1/1:7,4:12:33.08:432,33,0	0/0:12,0:12:32.93:0,33,418	1/1:13,0:13:34.08:204,34,0	0/0:6,0:5:0.40:0,0,72
chr10	105833112	.	TC	T	1036.53	PASS	AB=0.873;AC=29;AF=0.518;AN=56;BaseQRankSum=8.952;DP=315;FS=0.574;HRun=11;HaplotypeScore=58.6028;InbreedingCoeff=0.2167;MQ=84.16;MQ0=0;MQRankSum=-2.103;QD=4.53;ReadPosRankSum=4.923;VQSLOD=0.1913;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,2:25:30.03:0,30,300	1/1:1,0:1:2.74:12,3,0	0/1:19,0:17:16.51:17,0,72	0/0:10,0:9:8.10:0,8,65	0/1:9,2:11:33.46:33,0,66	1/1:11,0:11:17.69:63,18,0	1/1:8,0:8:12.30:44,12,0	1/1:24,0:24:46.20:203,46,0	0/1:9,0:9:2.24:2,0,122	0/1:12,1:13:3.59:4,0,171	0/1:7,2:9:12.60:13,0,77	0/1:9,2:11:9.62:10,0,104	0/0:6,0:6:12.02:0,12,121	0/1:4,1:5:18.63:19,0,26	0/0:8,0:8:15.01:0,15,140	0/0:5,0:5:12.03:0,12,128	0/0:12,0:12:21.02:0,21,202	0/1:7,2:9:15.62:16,0,55	1/1:15,0:15:35.99:168,36,0	1/1:20,0:20:45.41:224,45,0	1/1:11,0:11:19.49:89,19,0	0/0:13,0:13:15.02:0,15,151	0/1:9,0:10:10.46:10,0,105	0/0:6,0:6:6.01:0,6,58	1/1:12,0:12:18.82:65,19,0	0/1:10,2:12:31.06:31,0,109	1/1:13,0:13:34.49:182,34,0	0/1:4,1:5:22.48:22,0,24
chr10	105833150	.	T	TAAA	1928.67	PASS	AB=0.800;AC=11;AF=0.196;AN=56;BaseQRankSum=4.924;DP=321;FS=10.167;HRun=0;HaplotypeScore=63.4702;InbreedingCoeff=0.8388;MQ=69.79;MQ0=1;MQRankSum=-3.268;QD=25.72;ReadPosRankSum=-2.372;VQSLOD=2.0547;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.23:0,66,1213	1/1:1,0:1:3.01:31,3,0	0/0:19,0:11:9.97:0,10,226	0/0:13,0:6:15.02:0,15,187	0/0:10,0:10:30.10:0,30,529	0/0:7,0:7:20.94:0,21,202	0/0:7,0:7:16.15:0,16,127	1/1:8,9:19:47.27:735,47,0	0/0:15,0:15:42.09:0,42,700	0/0:11,0:11:33.05:0,33,545	0/0:12,0:12:33.01:0,33,545	0/0:6,0:6:18.06:0,18,333	0/0:4,0:4:12.04:0,12,217	0/0:8,0:8:24.08:0,24,436	0/0:7,0:7:21.07:0,21,391	0/0:11,0:11:30.10:0,30,536	0/0:5,0:5:15.05:0,15,271	0/0:11,0:11:30.10:0,30,520	1/1:8,4:14:28.88:432,29,0	0/1:12,3:16:3.62:247,0,4	1/1:2,7:10:16.97:338,17,0	0/0:10,0:10:27.08:0,27,470	0/0:13,0:13:39.11:0,39,692	0/0:12,0:12:36.12:0,36,668	0/0:14,0:14:38.33:0,38,313	0/0:21,0:21:57.19:0,57,1042	1/1:10,4:15:11.94:315,12,0	0/0:4,0:4:12.04:0,12,203
chr10	105833151	.	T	TAA	2257.89	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=5.645;DP=330;FS=1.893;HRun=10;HaplotypeScore=59.6334;InbreedingCoeff=0.7897;MQ=70.35;MQ0=1;MQRankSum=-3.153;QD=15.90;ReadPosRankSum=-2.938;VQSLOD=1.3092;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.08:0,66,655	1/1:1,0:1:3.01:32,3,0	0/1:19,0:11:8.53:9,0,39	0/1:13,0:6:6.29:6,0,51	0/0:10,0:10:24.04:0,24,244	1/1:2,5:8:15.05:223,15,0	1/1:1,6:7:15.05:224,15,0	1/1:24,0:25:57.05:554,57,0	0/0:16,0:16:35.98:0,36,348	0/0:11,0:11:21.03:0,21,214	0/0:12,0:12:27.06:0,27,275	0/0:5,0:6:17.78:0,18,164	0/0:4,0:4:9.02:0,9,92	0/0:8,0:8:18.01:0,18,183	0/0:7,0:7:21.03:0,21,207	0/0:11,0:11:27.03:0,27,267	0/0:5,0:6:11.73:0,12,103	0/0:11,0:11:21.01:0,21,214	1/1:14,0:14:30.06:338,30,0	1/1:15,0:16:18.03:198,18,0	1/1:10,0:10:21.04:207,21,0	0/0:10,0:10:21:0,21,214	0/0:13,0:13:36.08:0,36,366	0/0:12,0:12:36.08:0,36,366	1/1:3,11:14:30.10:447,30,0	0/0:21,0:21:54.06:0,54,542	1/1:15,0:15:22.29:224,22,0	0/0:4,0:4:2.95:0,3,30
chr10	105833828	.	C	CA	5168.24	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-9.715;DP=691;FS=3.086;HRun=0;HaplotypeScore=79.4138;InbreedingCoeff=0.9812;MQ=67.74;MQ0=1;MQRankSum=-0.271;QD=24.97;ReadPosRankSum=-1.819;VQSLOD=4.9982;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:52:99:0,144,1806	1/1:0,11:11:26.92:363,27,0	0/0:15,0:16:41.57:0,42,386	0/0:22,0:19:35.21:0,35,518	0/0:22,0:22:63.15:0,63,774	1/1:27,0:27:7.18:79,7,0	1/1:14,0:15:11.79:94,12,0	1/1:1,29:31:84.12:1060,84,0	0/0:29,0:29:81.12:0,81,965	0/0:24,0:26:77.95:0,78,908	0/0:16,0:19:49.34:0,49,662	0/0:22,0:22:66.19:0,66,866	0/0:21,0:21:63.12:0,63,779	0/0:13,0:15:39.06:0,39,444	0/0:29,0:29:87.19:0,87,1069	0/0:22,0:22:63.13:0,63,770	0/0:31,0:34:99:0,99,1218	0/0:24,0:24:69.23:0,69,947	1/1:1,21:23:67.39:919,67,0	1/1:3,22:25:35.76:717,36,0	1/1:1,36:37:78.26:1227,78,0	0/0:22,0:23:69.14:0,69,838	0/0:21,0:24:68.88:0,69,843	0/0:35,0:38:93.56:0,94,1295	1/1:22,0:22:27.08:227,27,0	0/0:24,0:26:78.16:0,78,931	1/1:0,16:16:33.10:483,33,0	0/0:15,0:15:45.08:0,45,548
chr10	105834206	.	GTTT	G	1628.97	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=9.574;DP=624;FS=0.000;HRun=12;HaplotypeScore=110.9666;InbreedingCoeff=0.4559;MQ=69.55;MQ0=3;MQRankSum=-2.661;QD=10.06;ReadPosRankSum=1.729;VQSLOD=0.8538;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:39:99:0,102,1688	0/0:0,0:13:13.71:0,14,29	0/0:30,0:20:23.11:0,23,247	0/0:21,0:17:37.27:0,37,253	0/0:22,0:25:63.59:0,64,1029	1/1:2,20:22:48.14:606,48,0	1/1:2,18:21:40.65:543,41,0	0/1:26,0:27:26.41:26,0,376	0/0:24,0:25:69.13:0,69,1163	0/0:25,0:27:54.14:0,54,871	0/0:24,0:28:78.22:0,78,1365	0/0:19,0:19:47.53:0,48,742	0/0:12,0:13:25.23:0,25,411	0/0:23,0:24:65.75:0,66,965	0/0:32,0:33:96.22:0,96,1634	0/0:19,0:21:51.63:0,52,841	0/0:29,0:29:83.99:0,84,1341	0/0:16,0:17:48.09:0,48,788	0/1:25,0:25:16.89:17,0,359	0/1:25,0:25:61.20:61,0,223	0/1:5,0:5:2.85:3,0,37	0/0:14,0:18:44.87:0,45,715	0/0:33,0:33:81.25:0,81,1439	0/0:17,0:17:48.15:0,48,868	1/1:6,14:20:38.77:465,39,0	0/0:19,0:19:51.12:0,51,870	0/1:17,0:16:70.46:70,0,80	0/0:8,0:8:15.05:0,15,263
chr10	105834214	.	TTTTTG	T	1619.73	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.121;DP=617;FS=3.664;HRun=0;HaplotypeScore=137.1177;InbreedingCoeff=0.9383;MQ=71.54;MQ0=3;MQRankSum=-2.051;QD=17.80;ReadPosRankSum=-1.424;VQSLOD=3.3256;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:39:96.03:0,96,2264	0/0:14,0:14:36.01:0,36,352	0/0:34,0:20:15.17:0,15,111	0/0:27,0:20:19.07:0,19,181	0/0:24,0:24:51.13:0,51,1150	0/0:21,0:21:41.37:0,41,205	0/0:22,0:22:47.38:0,47,264	1/1:13,12:24:35.89:394,36,0	0/0:25,0:25:54.19:0,54,1288	0/0:22,0:22:39.13:0,39,958	0/0:31,0:31:81.15:0,81,1883	0/0:19,0:19:33.09:0,33,624	0/0:12,0:12:26.96:0,27,454	0/0:24,0:24:39.05:0,39,907	0/0:37,0:37:84.26:0,84,1939	0/0:19,0:19:33.58:0,34,880	0/0:29,0:29:66.17:0,66,1513	0/0:16,0:16:33.11:0,33,820	1/1:11,14:25:41.92:503,42,0	1/1:11,11:22:27.48:520,27,0	1/1:3,1:4:3.01:54,3,0	0/0:19,0:19:42.12:0,42,959	0/0:31,0:31:66.20:0,66,1611	0/0:18,0:18:45.12:0,45,1002	0/0:19,0:18:38.94:0,39,207	0/0:19,0:19:36.11:0,36,936	1/1:8,7:14:21.51:315,22,0	0/0:5,0:5:9.03:0,9,251
chr10	105834580	.	TCTCTCTCTCTCTCTCTCC	T	3892.72	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=9.061;DP=565;FS=0.672;HRun=0;HaplotypeScore=253.0650;InbreedingCoeff=0.8247;MQ=58.47;MQ0=18;MQRankSum=-5.780;QD=44.74;ReadPosRankSum=3.124;VQSLOD=2.8291;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:69.24:0,69,4053	1/1:9,1:10:18.06:599,18,0	0/0:27,0:3:5.84:0,6,42	0/0:44,0:14:14.61:0,15,298	0/0:26,0:26:66.23:0,66,4475	0/0:24,0:24:49.39:0,49,2296	0/0:9,0:9:13.66:0,14,504	1/1:13,0:12:8.07:127,8,0	0/0:14,0:14:33.57:0,34,2416	0/0:18,0:18:45.15:0,45,3093	0/0:19,0:18:45.15:0,45,3115	0/0:16,0:16:33.11:0,33,2312	0/0:18,0:18:36.12:0,36,2532	0/0:24,0:24:65.68:0,66,4654	0/0:29,0:28:66.67:0,67,4224	0/0:21,0:21:60.16:0,60,4064	0/0:34,0:34:96.33:0,96,6868	0/0:14,0:14:33.11:0,33,1829	0/1:23,0:22:99:340,0,205	1/1:7,7:14:27.08:1121,27,0	1/1:9,1:9:9.03:346,9,0	0/0:18,0:18:49.05:0,49,2875	0/0:24,0:23:57.18:0,57,3676	0/0:16,0:16:39.13:0,39,3107	0/0:17,0:15:36.06:0,36,2048	0/0:27,0:27:72.15:0,72,4548	1/1:10,7:17:30.10:1359,30,0	0/0:9,0:8:24.08:0,24,2035
chr10	105834582	.	TCTCTCTCTCTCTCTCC	T	3952.47	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.921;DP=573;FS=6.228;HRun=0;HaplotypeScore=237.7654;InbreedingCoeff=0.9470;MQ=58.39;MQ0=18;MQRankSum=-6.333;QD=41.60;ReadPosRankSum=1.092;VQSLOD=2.3974;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:72.09:0,72,3549	1/1:5,5:10:18.06:796,18,0	0/0:24,0:2:5.51:0,6,65	0/0:45,0:15:14.34:0,14,220	0/0:26,0:26:66.22:0,66,3931	0/0:24,0:24:50.09:0,50,1987	0/0:9,0:9:13.98:0,14,412	1/1:16,0:15:14.16:124,14,0	0/0:14,0:14:33.10:0,33,2159	0/0:17,0:17:45.15:0,45,2720	0/0:20,0:19:48.11:0,48,2770	0/0:15,0:15:33.10:0,33,2044	0/0:17,0:17:36.12:0,36,2243	0/0:24,0:24:65.81:0,66,4125	0/0:29,0:28:60.18:0,60,3700	0/0:22,0:22:63.16:0,63,3637	0/0:35,0:35:99:0,99,6116	0/0:15,0:15:31.41:0,31,1580	1/1:19,4:22:14.14:699,14,0	1/1:16,0:16:30.21:872,30,0	1/1:12,0:11:9.03:264,9,0	0/0:18,0:18:48.63:0,49,2485	0/0:25,0:24:57.18:0,57,3218	0/0:16,0:16:39.12:0,39,2771	0/0:16,0:14:33.07:0,33,1769	0/0:28,0:28:73.90:0,74,3966	1/1:16,2:18:30.10:1198,30,0	0/0:9,0:8:24.08:0,24,1829
chr10	105834596	.	TCC	T	1222.57	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=10.186;DP=536;FS=2.104;HRun=3;HaplotypeScore=109.5083;InbreedingCoeff=0.7891;MQ=64.89;MQ0=9;MQRankSum=-2.129;QD=9.19;ReadPosRankSum=-1.514;VQSLOD=-0.1391;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:32:22.53:0,23,709	1/1:8,0:8:23.63:156,24,0	0/0:25,0:11:21.89:0,22,231	0/1:34,0:15:23.38:23,0,71	0/0:29,0:29:26.65:0,27,785	0/1:25,0:25:14.87:15,0,350	0/0:9,0:9:12.19:0,12,85	1/1:12,0:11:29.95:256,30,0	0/0:13,0:13:37.32:0,37,522	0/0:19,0:19:53.91:0,54,654	0/0:19,0:18:48.04:0,48,565	0/0:12,0:12:17.73:0,18,379	0/0:17,0:17:44.97:0,45,452	0/0:23,0:23:34.32:0,34,789	0/0:25,0:24:51.63:0,52,775	0/0:24,0:24:53.90:0,54,834	0/0:37,0:37:84.99:0,85,1380	0/0:11,0:11:13.07:0,13,282	1/1:15,0:15:44.72:358,45,0	1/1:11,2:13:38.45:265,38,0	1/1:10,1:10:11.88:86,12,0	0/0:20,0:20:32.41:0,32,393	0/0:24,0:23:52.49:0,52,667	0/0:15,0:15:42.12:0,42,698	0/0:15,0:14:12.54:0,13,335	0/0:26,0:26:32.98:0,33,622	1/1:15,0:15:38.41:254,38,0	0/0:8,0:8:24.08:0,24,414
chr10	105834628	.	AT	A	908.08	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.906;DP=522;FS=0.000;HRun=9;HaplotypeScore=100.5113;InbreedingCoeff=0.9834;MQ=67.75;MQ0=6;MQRankSum=0.528;QD=18.53;ReadPosRankSum=0.175;VQSLOD=3.2178;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.18:0,60,692	0/0:9,0:9:24.66:0,25,116	0/0:27,0:17:23.57:0,24,327	0/0:28,0:22:29.97:0,30,329	0/0:25,0:24:58.72:0,59,662	1/1:4,13:17:36.01:329,36,0	1/1:1,8:10:21:192,21,0	0/0:24,0:24:53.11:0,53,217	0/0:17,0:17:45.08:0,45,496	0/0:19,0:18:42.12:0,42,485	0/0:21,0:21:54.16:0,54,619	0/0:12,0:11:27.08:0,27,310	0/0:11,0:11:27.08:0,27,312	0/0:16,0:16:35.47:0,35,388	0/0:13,0:13:30.05:0,30,331	0/0:23,0:22:60.18:0,60,692	0/0:32,0:31:82.67:0,83,911	0/0:12,0:12:36.11:0,36,412	0/0:25,0:21:53.76:0,54,229	0/0:18,0:17:42.03:0,42,182	0/0:11,0:11:21.24:0,21,87	0/0:21,0:21:60.17:0,60,683	0/0:23,0:24:65.41:0,65,734	0/0:22,0:21:60.14:0,60,662	1/1:3,19:22:59.39:529,59,0	0/0:18,0:18:39.11:0,39,446	0/0:16,0:16:32.04:0,32,134	0/0:5,0:5:12.04:0,12,139
chr10	105834630	.	T	TA	3598.09	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=2.910;DP=526;FS=10.552;HRun=0;HaplotypeScore=94.3965;InbreedingCoeff=0.9952;MQ=66.54;MQ0=7;MQRankSum=-2.978;QD=33.63;ReadPosRankSum=-0.999;VQSLOD=2.0445;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:60.20:0,60,837	1/1:1,9:10:26.95:334,27,0	0/0:26,0:16:42.86:0,43,480	0/0:27,0:21:31.55:0,32,451	0/0:25,0:24:69.08:0,69,880	0/0:17,0:17:47.22:0,47,308	0/0:12,0:11:23.07:0,23,147	1/1:1,23:24:65.81:905,66,0	0/0:18,0:18:48.56:0,49,614	0/0:18,0:17:48.14:0,48,638	0/0:20,0:20:57.17:0,57,765	0/0:13,0:12:27.09:0,27,375	0/0:12,0:12:30.09:0,30,402	0/0:15,0:15:42.11:0,42,538	0/0:12,0:12:36.06:0,36,451	0/0:22,0:21:60.20:0,60,836	0/0:33,0:32:96.22:0,96,1233	0/0:14,0:13:39.09:0,39,520	1/1:5,20:21:59.55:819,60,0	1/1:1,16:16:48.07:646,48,0	1/1:1,11:12:24.08:340,24,0	0/0:21,0:21:63.19:0,63,846	0/0:24,0:24:68.02:0,68,927	0/0:22,0:21:60.18:0,60,802	0/0:22,0:22:64.12:0,64,392	0/0:16,0:16:48.12:0,48,605	1/1:5,14:18:44.94:554,45,0	0/0:5,0:5:15.04:0,15,193
chr10	105835756	.	T	TTCTG	4368.39	PASS	AB=0.896;AC=19;AF=0.339;AN=56;BaseQRankSum=-1.621;DP=740;FS=2.296;HRun=0;HaplotypeScore=165.5092;InbreedingCoeff=0.7663;MQ=64.56;MQ0=6;MQRankSum=-6.741;QD=15.38;ReadPosRankSum=-3.318;VQSLOD=3.9935;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:93.23:0,93,1354	1/1:8,6:14:15.05:311,15,0	0/0:25,0:21:0.47:0,0,1	0/1:16,0:11:0:0,0,0	0/0:22,0:22:33.11:0,33,502	1/1:8,0:18:24.08:417,24,0	1/1:22,0:28:6.02:104,6,0	1/1:38,0:37:18.06:276,18,0	0/0:28,0:28:48.16:0,48,734	0/0:27,0:27:24.07:0,24,354	0/0:16,0:16:24.02:0,24,324	0/0:30,0:30:54.09:0,54,758	0/0:13,0:13:27.08:0,27,397	0/0:19,0:19:36.07:0,36,504	0/0:35,0:35:60.20:0,60,923	0/0:39,0:39:63.21:0,63,978	0/0:25,0:26:45.13:0,45,661	0/1:20,0:20:46.46:46,0,300	1/1:20,4:22:12.04:262,12,0	1/1:14,11:28:33.11:740,33,0	0/1:25,18:44:22.76:464,0,23	0/0:28,0:28:42.14:0,42,647	0/0:25,0:25:36.11:0,36,538	0/0:33,0:33:54.18:0,54,819	1/1:11,1:22:30.10:517,30,0	0/0:32,0:32:36.09:0,36,488	1/1:10,19:29:54.18:1231,54,0	0/0:8,0:8:21.07:0,21,326
chr10	105835850	.	TACACAC	T	1215.42	PASS	AB=1.000;AC=15;AF=0.288;AN=52;BaseQRankSum=5.652;DP=564;FS=5.180;HRun=0;HaplotypeScore=224.1344;InbreedingCoeff=0.7831;MQ=56.88;MQ0=7;MQRankSum=-7.515;QD=8.16;ReadPosRankSum=1.545;VQSLOD=2.2754;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:47:36.11:0,36,727	1/1:7,0:11:12.04:167,12,0	./.	./.	0/0:20,0:20:10.90:0,11,194	1/1:4,5:9:9.03:157,9,0	1/1:17,10:28:9.68:160,10,0	0/1:26,0:24:0:0,0,0	0/0:19,0:24:33.09:0,33,610	0/0:24,0:24:36.99:0,37,780	0/0:16,0:18:9.03:0,9,148	0/0:16,0:17:14.06:0,14,344	0/0:8,0:7:3.01:0,3,65	0/0:12,0:12:12.04:0,12,314	0/0:17,0:18:15.04:0,15,352	0/0:14,0:13:6.49:0,6,193	0/0:19,0:25:34.29:0,34,633	0/0:19,0:21:33.03:0,33,553	1/1:16,0:20:12.04:167,12,0	1/1:13,0:17:9.03:126,9,0	0/0:42,0:41:3.01:0,3,43	0/0:14,0:14:6.02:0,6,157	0/0:19,0:21:21.07:0,21,526	0/0:19,0:20:15.05:0,15,396	1/1:9,7:17:23.93:406,24,0	0/0:23,0:24:25.53:0,26,520	1/1:16,0:21:15.05:207,15,0	0/0:2,0:2:6.01:0,6,123
chr10	105836386	.	C	CG	1972.36	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.892;DP=589;FS=4.333;HRun=2;HaplotypeScore=58.3151;InbreedingCoeff=0.9980;MQ=78.54;MQ0=0;MQRankSum=-0.468;QD=33.43;ReadPosRankSum=1.718;VQSLOD=3.6578;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.17:0,78,894	0/0:10,0:10:30.09:0,30,372	0/0:17,0:17:31.59:0,32,322	0/0:15,0:15:35.90:0,36,386	0/0:22,0:22:63.17:0,63,754	1/1:1,19:20:54.18:777,54,0	1/1:0,23:23:54.18:777,54,0	0/0:28,0:28:78.18:0,78,925	0/0:19,0:19:57.17:0,57,693	0/0:23,0:23:66.21:0,66,816	0/0:19,0:19:51.16:0,51,632	0/0:36,0:36:99:0,99,1226	0/0:14,0:14:36.03:0,36,425	0/0:18,0:18:54.14:0,54,641	0/0:23,0:23:63.16:0,63,744	0/0:29,0:29:84.26:0,84,1039	0/0:22,0:22:57.14:0,57,689	0/0:28,0:28:81.25:0,81,1002	0/0:18,0:18:51.16:0,51,630	0/0:23,0:23:69.20:0,69,842	0/0:20,0:20:57.10:0,57,653	0/0:25,0:25:69.18:0,69,827	0/0:16,0:16:36.05:0,36,427	0/0:21,0:21:57.14:0,57,689	1/1:1,15:16:39.13:561,39,0	0/0:20,0:20:60.12:0,60,712	0/0:27,0:27:75.22:0,75,905	0/0:7,0:7:20.98:0,21,240
chr10	105837154	.	GA	G	1623.74	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.215;DP=510;FS=10.249;HRun=10;HaplotypeScore=55.2576;InbreedingCoeff=0.9261;MQ=61.25;MQ0=8;MQRankSum=-0.342;QD=15.76;ReadPosRankSum=0.131;VQSLOD=3.0277;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:85.23:0,85,1142	0/0:5,0:5:12.03:0,12,133	0/0:10,0:1:0:0,0,0	0/0:17,0:6:5.93:0,6,50	0/0:21,0:21:46.78:0,47,479	0/0:21,0:21:59.19:0,59,636	0/0:17,0:17:33.07:0,33,352	1/1:18,13:30:67.78:554,68,0	0/0:10,0:10:24.06:0,24,265	0/0:17,0:17:42.11:0,42,465	0/0:16,0:16:45.12:0,45,492	0/0:15,0:15:30:0,30,316	0/0:11,0:11:18.05:0,18,198	0/0:13,0:13:33.04:0,33,350	0/0:17,0:17:48.13:0,48,531	0/0:18,0:18:51.12:0,51,553	0/0:39,0:39:99:0,99,1086	0/0:23,0:22:63.16:0,63,687	1/1:5,13:17:39.44:334,39,0	1/1:4,14:18:35.97:312,36,0	1/1:0,11:11:23.99:207,24,0	0/0:8,0:8:16.60:0,17,170	0/0:11,0:11:30.08:0,30,332	0/0:17,0:17:45.12:0,45,495	0/0:20,0:20:32.93:0,33,379	0/0:22,0:22:51.13:0,51,555	1/1:3,21:24:44.74:390,45,0	0/0:17,1:16:16.53:0,17,405
chr10	105838394	.	TA	T	333.69	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.997;DP=730;FS=4.332;HRun=2;HaplotypeScore=70.5823;InbreedingCoeff=0.9991;MQ=84.98;MQ0=0;MQRankSum=-1.699;QD=27.81;ReadPosRankSum=-0.950;VQSLOD=2.9166;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,178,2632	1/1:0,12:12:33.11:428,33,0	0/0:28,0:28:81.06:0,81,1040	0/0:18,0:18:54.16:0,54,759	0/0:25,0:25:75.25:0,75,1123	0/0:25,0:25:75.20:0,75,1078	0/0:20,0:20:60.19:0,60,878	0/0:28,0:28:84.28:0,84,1259	0/0:38,0:38:99:0,108,1618	0/0:32,0:32:96.32:0,96,1423	0/0:14,0:14:36.12:0,36,540	0/0:28,0:28:84.28:0,84,1259	0/0:19,0:19:54.17:0,54,788	0/0:20,0:20:51.17:0,51,762	0/0:31,0:31:90.30:0,90,1349	0/0:18,0:18:54.18:0,54,810	0/0:36,0:36:99:0,108,1597	0/0:23,0:23:69.22:0,69,1013	0/0:26,0:26:75.25:0,75,1124	0/0:25,0:25:69.22:0,69,1012	0/0:39,0:39:99:0,111,1645	0/0:35,0:35:99:0,99,1482	0/0:32,0:32:93.31:0,93,1385	0/0:27,0:27:81.27:0,81,1214	0/0:21,0:21:63.21:0,63,944	0/0:25,0:25:72.24:0,72,1061	0/0:16,0:16:48.16:0,48,718	0/0:10,0:10:30.10:0,30,450
chr10	105838703	.	GGAAGGAAGGAAGGAAGGAAA	G	3174.60	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.525;DP=558;FS=2.120;HRun=0;HaplotypeScore=287.7955;InbreedingCoeff=0.9140;MQ=65.07;MQ0=1;MQRankSum=-4.940;QD=43.49;ReadPosRankSum=-2.224;VQSLOD=2.4773;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:57.15:0,57,3705	0/0:11,0:11:1.10:0,1,1956	0/0:10,0:7:5.98:0,6,53	0/0:19,0:15:19.29:0,19,474	0/0:25,0:25:60.20:0,60,4408	0/0:17,0:17:39.11:0,39,2054	0/0:26,0:26:60.12:0,60,2758	1/1:17,0:16:20.47:204,20,0	0/0:17,0:17:39.13:0,39,2860	0/0:26,0:26:60.21:0,60,5112	0/0:9,0:9:14.88:0,15,914	0/0:17,0:17:45.15:0,45,3737	0/0:17,0:17:42.06:0,42,2934	0/0:12,0:12:24.07:0,24,1711	0/0:25,0:25:57.16:0,57,4028	0/0:24,0:24:69.23:0,69,5727	0/0:31,0:31:72.19:0,72,5324	0/0:35,0:35:48.59:0,49,4869	1/1:3,9:12:23.06:627,23,0	1/1:3,11:14:17.99:703,18,0	1/1:8,2:10:17.80:357,18,0	0/0:25,0:25:53.22:0,53,4924	0/0:28,0:28:51.17:0,51,3490	0/0:31,0:31:79.40:0,79,5594	0/0:24,0:24:48.16:0,48,2747	0/0:23,0:23:54.16:0,54,3901	1/1:4,16:20:27.09:1455,27,0	0/0:8,0:8:21.06:0,21,1701
chr10	105838719	.	GGAAA	G	1675.16	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=13.125;DP=549;FS=0.000;HRun=0;HaplotypeScore=111.6099;InbreedingCoeff=0.6055;MQ=58.30;MQ0=4;MQRankSum=-4.638;QD=11.97;ReadPosRankSum=-2.600;VQSLOD=2.6586;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:44.81:0,45,1143	0/1:14,0:14:99:108,0,264	0/0:10,0:5:8.41:0,8,78	0/0:26,0:15:34.85:0,35,333	0/0:28,0:28:55.78:0,56,1297	0/1:16,0:16:70:200,0,70	0/1:28,0:28:99:276,0,186	1/1:3,13:14:39.61:285,40,0	0/0:18,0:18:54.07:0,54,943	0/0:25,0:25:72.09:0,72,1501	0/0:8,0:8:23.86:0,24,358	0/0:18,0:18:54.12:0,54,1123	0/0:18,0:18:54:0,54,895	0/0:11,0:11:27.06:0,27,508	0/0:22,0:22:63.14:0,63,1219	0/0:26,0:26:78.17:0,78,1680	0/0:33,0:33:87.12:0,87,1611	0/0:27,0:27:35.53:0,36,1351	1/1:10,0:10:24.72:189,25,0	1/1:12,0:12:17.91:154,18,0	1/1:9,0:9:20.66:135,21,0	0/0:26,0:26:62.15:0,62,1503	0/0:21,0:21:63.08:0,63,998	0/0:30,0:30:87.95:0,88,1654	0/1:18,0:18:82.86:246,0,83	0/0:21,0:21:57.15:0,57,1164	1/1:17,0:17:27.05:267,27,0	0/0:13,0:13:39.04:0,39,649
chr10	105838723	.	AGAAG	A	2057.01	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=10.299;DP=570;FS=10.561;HRun=0;HaplotypeScore=115.9388;InbreedingCoeff=0.7761;MQ=61.63;MQ0=5;MQRankSum=-3.581;QD=19.05;ReadPosRankSum=0.107;VQSLOD=2.7846;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:68:0,68,1284	0/0:16,0:16:28.32:0,28,532	0/0:14,0:8:8.17:0,8,145	0/0:30,0:19:19.12:0,19,379	0/0:26,1:27:13.88:0,14,1179	1/1:9,6:15:30.10:484,30,0	1/1:20,8:28:51.17:797,51,0	0/0:18,0:16:12.47:0,12,93	0/0:20,0:20:48.15:0,48,960	0/0:26,0:26:66.23:0,66,1498	0/0:10,0:10:24.07:0,24,451	0/0:18,0:18:48.16:0,48,1044	0/0:18,0:18:36.12:0,36,762	0/0:9,0:9:18.06:0,18,397	0/0:22,0:22:48.14:0,48,1013	0/0:28,0:28:75.24:0,75,1640	0/0:30,0:30:72.23:0,72,1509	0/0:28,0:28:63.22:0,63,1353	0/1:9,0:9:7.80:67,0,8	1/1:11,0:11:10.71:106,11,0	0/1:12,0:12:15.25:15,0,17	0/0:26,0:26:57.20:0,57,1320	0/0:24,0:24:48.14:0,48,919	0/0:32,0:32:70.48:0,70,1452	1/1:7,10:17:33.11:523,33,0	0/0:21,0:21:45.13:0,45,990	1/1:16,0:16:27.01:243,27,0	0/0:13,0:13:36.12:0,36,713
chr10	105838771	.	TA	T	1237.09	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.974;DP=617;FS=5.134;HRun=1;HaplotypeScore=87.1635;InbreedingCoeff=0.9965;MQ=88.80;MQ0=0;MQRankSum=-2.280;QD=30.17;ReadPosRankSum=-0.911;VQSLOD=2.9921;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1551	0/0:16,0:16:48.13:0,48,710	0/0:33,0:32:80.18:0,80,1220	0/0:38,0:38:81.66:0,82,1288	0/0:24,0:24:72.25:0,72,1148	1/1:1,14:15:36.12:503,36,0	1/1:0,16:16:45.15:624,45,0	0/0:35,0:35:99:0,105,1648	0/0:31,0:31:93.25:0,93,1453	0/0:25,0:25:75.21:0,75,1132	0/0:19,0:19:53.98:0,54,841	0/0:22,0:22:66.14:0,66,996	0/0:18,0:18:54.16:0,54,838	0/0:11,0:11:33.11:0,33,527	0/0:22,0:22:66.23:0,66,1053	0/0:29,0:29:87.29:0,87,1366	0/0:27,0:27:81.23:0,81,1242	0/0:26,0:26:78.27:0,78,1246	0/0:12,0:12:36.11:0,36,553	0/0:12,0:12:27.09:0,27,431	0/0:23,0:23:60.12:0,60,847	0/0:25,0:25:75.26:0,75,1195	0/0:19,0:19:54.17:0,54,837	0/0:26,0:26:75.23:0,75,1162	1/1:0,10:10:18.06:251,18,0	0/0:15,0:15:45.15:0,45,720	0/0:18,0:18:42.14:0,42,662	0/0:16,0:16:48.16:0,48,767
chr10	105838800	.	T	TA	489.43	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.948;DP=619;FS=1.076;HRun=1;HaplotypeScore=65.8566;InbreedingCoeff=0.9976;MQ=90.63;MQ0=0;MQRankSum=-0.535;QD=37.65;ReadPosRankSum=1.122;VQSLOD=4.1508;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1372	1/1:0,13:13:39.13:584,39,0	0/0:21,0:21:54.16:0,54,678	0/0:29,0:29:75.08:0,75,920	0/0:27,0:27:81.25:0,81,1035	0/0:14,0:14:39.11:0,39,491	0/0:13,0:13:36.10:0,36,453	0/0:34,0:34:99:0,99,1261	0/0:36,0:36:99:0,105,1336	0/0:21,0:21:60.19:0,60,778	0/0:26,0:26:75.17:0,75,936	0/0:19,0:19:57.17:0,57,723	0/0:21,0:21:60.19:0,60,775	0/0:13,0:13:39.13:0,39,506	0/0:26,0:26:75.24:0,75,974	0/0:26,0:26:78.24:0,78,997	0/0:31,0:31:93.29:0,93,1187	0/0:25,0:25:75.21:0,75,955	0/0:14,0:14:42.13:0,42,532	0/0:18,0:18:45.12:0,45,556	0/0:26,0:26:75.22:0,75,946	0/0:21,0:21:60.18:0,60,764	0/0:22,0:22:63.20:0,63,816	0/0:22,0:22:57.18:0,57,739	0/0:12,0:12:24.06:0,24,297	0/0:17,0:17:48.15:0,48,610	0/0:19,0:19:51.15:0,51,642	0/0:15,0:15:45.10:0,45,564
chr10	105839745	.	TC	T	1374.09	PASS	AB=0.636;AC=17;AF=0.315;AN=54;BaseQRankSum=6.604;DP=314;FS=1.389;HRun=2;HaplotypeScore=47.2836;InbreedingCoeff=0.7717;MQ=51.26;MQ0=18;MQRankSum=-5.984;QD=16.36;ReadPosRankSum=-0.043;VQSLOD=3.5015;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:53.93:0,54,656	./.	1/1:3,0:3:1.78:37,2,0	0/0:8,0:2:2.50:0,2,9	0/0:14,0:14:24.08:0,24,336	1/1:3,13:15:24.08:306,24,0	1/1:1,4:4:6.02:77,6,0	1/1:3,12:14:36:407,36,0	0/0:12,0:10:18.06:0,18,254	0/0:10,0:8:24.03:0,24,287	0/0:12,0:11:18.02:0,18,231	0/0:14,0:14:24.05:0,24,303	0/0:4,0:3:6.01:0,6,67	0/0:7,0:7:18.03:0,18,219	0/0:6,0:6:9.03:0,9,126	0/0:10,0:10:27.09:0,27,381	0/0:36,0:34:64.66:0,65,865	0/0:18,0:17:17.23:0,17,408	1/1:3,7:9:13.39:242,13,0	1/1:3,7:10:20.93:213,21,0	0/1:3,4:7:8.93:9,0,75	0/0:10,0:10:15.04:0,15,195	0/0:8,0:7:18.01:0,18,201	0/0:15,0:13:27.07:0,27,363	1/1:0,6:5:6.02:77,6,0	0/0:10,0:9:21.07:0,21,293	1/1:0,12:12:15.05:192,15,0	0/0:6,0:5:9.03:0,9,126
chr10	105840187	.	TCCTTTGA	T	4702.39	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.363;DP=908;FS=5.910;HRun=0;HaplotypeScore=218.3644;InbreedingCoeff=0.9992;MQ=72.60;MQ0=0;MQRankSum=-13.075;QD=46.56;ReadPosRankSum=-1.093;VQSLOD=3.8964;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:65:99:0,187,6990	1/1:1,10:11:27.01:624,27,0	0/0:28,0:28:69.24:0,69,2428	0/0:22,0:22:61.15:0,61,2180	0/0:23,0:23:66.23:0,66,2440	1/1:1,24:25:63.04:1422,63,0	1/1:8,43:51:81.28:1935,81,0	0/0:28,0:28:75.26:0,75,2834	0/0:47,0:47:99:0,132,5036	0/0:39,0:39:99:0,108,4103	0/0:15,0:15:42.14:0,42,1596	0/0:41,0:41:99:0,114,4490	0/0:35,0:35:99:0,99,3763	0/0:41,0:41:99:0,114,4487	0/0:31,0:31:87.28:0,87,3214	0/0:34,0:34:99:0,102,3925	0/0:31,0:31:84.29:0,84,3200	0/0:33,0:33:96.33:0,96,3680	0/0:23,0:23:63.22:0,63,2426	0/0:11,0:11:30.10:0,30,1163	0/0:95,0:95:99:0,280,10756	0/0:27,0:27:72.25:0,72,2724	0/0:16,0:16:39.13:0,39,1467	0/0:32,0:32:93.32:0,93,3575	1/1:1,13:14:33:721,33,0	0/0:49,0:49:99:0,144,5502	0/0:30,0:30:82.16:0,82,3045	0/0:11,0:11:27.09:0,27,992
chr10	105840412	.	A	AT	5519.77	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-7.609;DP=684;FS=0.000;HRun=2;HaplotypeScore=90.4162;InbreedingCoeff=0.9283;MQ=71.20;MQ0=2;MQRankSum=-1.395;QD=24.75;ReadPosRankSum=-1.294;VQSLOD=4.2204;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:66:99:0,171,1958	1/1:1,8:9:21.07:294,21,0	0/0:25,0:23:32.12:0,32,367	0/1:20,0:19:8.55:9,0,265	0/0:28,0:28:75.08:0,75,827	1/1:14,11:24:55.32:644,55,0	1/1:4,18:21:49.98:680,50,0	1/1:2,23:25:68.99:853,69,0	0/0:15,0:15:41.97:0,42,429	0/0:28,0:28:52.47:0,52,642	0/0:18,0:18:48.06:0,48,514	0/0:23,0:23:57.09:0,57,619	0/0:23,0:23:60.47:0,60,707	0/0:25,0:25:59.28:0,59,716	0/0:15,0:15:39.10:0,39,455	0/0:21,0:21:48.11:0,48,549	0/0:48,0:48:99:0,129,1443	0/0:20,0:20:54.11:0,54,611	1/1:4,20:24:63.14:816,63,0	1/1:1,10:12:23.99:298,24,0	1/1:8,32:40:60.66:837,61,0	0/0:26,0:26:65.30:0,65,689	0/0:16,0:16:36.04:0,36,400	0/0:18,0:19:48.11:0,48,561	1/1:5,7:12:21.68:249,22,0	0/0:33,0:33:87:0,87,985	1/1:9,23:33:63.94:841,64,0	0/0:12,0:12:36.03:0,36,377
chr10	105841290	.	A	ATT	2782.58	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-5.767;DP=549;FS=0.936;HRun=10;HaplotypeScore=68.5418;InbreedingCoeff=0.9560;MQ=84.26;MQ0=0;MQRankSum=-0.252;QD=26.76;ReadPosRankSum=-3.138;VQSLOD=3.0113;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:89.97:0,90,909	0/0:12,0:12:33.06:0,33,329	0/0:16,0:16:35.57:0,36,360	0/0:22,0:23:7.50:0,8,315	0/0:23,0:23:66.15:0,66,671	0/0:18,0:18:48.09:0,48,488	0/0:20,0:20:54.08:0,54,542	1/1:5,17:27:65.08:766,65,0	0/0:17,0:17:48.04:0,48,460	0/0:21,0:21:60.13:0,60,610	0/0:17,0:19:41.54:0,42,454	0/0:16,0:17:44.82:0,45,439	0/0:15,0:15:42.07:0,42,427	0/0:18,0:18:45.09:0,45,458	0/0:20,0:21:41.77:0,42,469	0/0:13,0:13:24:0,24,244	0/0:32,0:34:77.62:0,78,891	0/0:21,0:21:45.03:0,45,451	1/1:8,11:20:41.60:542,42,0	1/1:1,13:14:39.09:538,39,0	1/1:1,11:14:23.56:306,24,0	0/0:17,0:19:56.60:0,57,542	0/0:18,0:19:50.83:0,51,493	0/0:21,0:21:60.13:0,60,610	0/0:5,0:6:5.74:0,6,113	0/0:25,0:25:63.09:0,63,641	1/1:4,24:29:53.99:805,54,0	0/0:12,0:12:36.08:0,36,366
chr10	105841479	.	A	AT	1707.98	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-8.418;DP=507;FS=0.000;HRun=6;HaplotypeScore=48.0315;InbreedingCoeff=0.8794;MQ=66.83;MQ0=0;MQRankSum=2.767;QD=24.75;ReadPosRankSum=0.610;VQSLOD=3.1549;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,117,1155	1/1:3,6:9:15.05:186,15,0	0/0:6,0:6:2.99:0,3,25	0/0:6,0:6:0.06:0,0,5	0/0:14,0:14:39.08:0,39,392	1/1:2,21:23:56.68:708,57,0	1/1:0,21:21:51.16:635,51,0	0/0:27,0:27:62.96:0,63,602	0/0:20,0:20:51.05:0,51,496	0/0:27,0:27:69.10:0,69,675	0/0:15,0:15:39.09:0,39,397	0/0:14,0:14:30.04:0,30,293	0/0:16,0:16:48.10:0,48,483	0/0:14,0:14:33.07:0,33,336	0/0:19,0:19:48.08:0,48,477	0/0:5,0:5:9.02:0,9,92	0/0:22,0:22:54.12:0,54,550	0/0:25,0:25:63.07:0,63,617	0/0:21,0:21:50.85:0,51,500	0/0:9,0:9:24.05:0,24,244	0/0:15,0:15:45.10:0,45,458	0/0:19,0:19:48.09:0,48,479	0/0:14,0:14:39.05:0,39,382	0/0:30,0:29:87.11:0,87,855	1/1:3,13:16:27.08:336,27,0	0/0:23,0:23:63.09:0,63,626	0/0:24,0:24:69.09:0,69,674	0/0:10,0:10:27.06:0,27,275
chr10	105841811	.	GTAAA	G	581.26	PASS	AB=1.000;AC=9;AF=0.188;AN=48;BaseQRankSum=4.368;DP=307;FS=7.453;HRun=0;HaplotypeScore=49.9751;InbreedingCoeff=0.5904;MQ=57.96;MQ0=2;MQRankSum=2.476;QD=9.08;ReadPosRankSum=-0.347;VQSLOD=1.0228;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:1.98:2,0,406	./.	./.	./.	0/0:12,0:12:12.04:0,12,285	1/1:9,3:13:9.03:143,9,0	1/1:5,4:9:12.04:190,12,0	0/0:28,0:28:30.06:0,30,529	1/1:6,1:7:3.01:48,3,0	0/0:8,0:8:15.04:0,15,308	0/0:5,0:5:9.03:0,9,195	0/0:11,0:11:12.04:0,12,266	0/0:4,0:4:3.01:0,3,72	0/0:3,0:3:6.02:0,6,140	0/0:6,0:6:9.03:0,9,215	0/0:9,0:9:12.04:0,12,287	0/0:29,0:29:51.18:0,51,1218	0/0:19,0:19:33.11:0,33,769	0/0:14,0:19:21.04:0,21,355	0/0:4,0:5:3.01:0,3,52	0/0:6,0:7:3.01:0,3,52	./.	0/0:9,0:9:3.01:0,3,72	0/0:9,0:9:9.03:0,9,215	1/1:6,10:16:21.07:333,21,0	0/0:11,0:11:15.05:0,15,358	0/0:4,0:8:12.04:0,12,208	0/0:8,0:8:18.02:0,18,333
chr10	105842587	.	GA	G	395.07	PASS	AB=0.812;AC=8;AF=0.143;AN=56;BaseQRankSum=5.729;DP=446;FS=7.179;HRun=11;HaplotypeScore=56.8267;InbreedingCoeff=0.6118;MQ=53.54;MQ0=15;MQRankSum=-5.682;QD=8.41;ReadPosRankSum=2.993;VQSLOD=1.8465;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:40.63:0,41,404	0/1:3,2:5:22.87:40,0,23	0/0:17,0:1:1.55:0,2,4	0/0:15,0:1:3:0,3,25	0/0:26,1:26:37.05:0,37,578	1/1:4,11:15:32.81:250,33,0	1/1:4,5:8:14.97:123,15,0	0/0:26,0:25:46.74:0,47,431	0/1:9,1:10:0.58:1,0,200	0/0:16,0:16:30.07:0,30,313	0/0:25,1:26:38.89:0,39,576	0/0:5,0:6:11.52:0,12,105	0/0:10,1:11:2.72:0,3,231	0/0:4,0:4:12.02:0,12,121	0/0:15,0:15:39.47:0,39,391	0/0:14,0:14:36.08:0,36,375	0/0:24,0:23:38.40:0,38,596	0/0:20,0:19:51.12:0,51,539	0/0:13,0:13:28.41:0,28,235	0/0:17,0:16:41.33:0,41,374	0/0:5,0:4:1.75:0,2,5	0/0:16,0:16:14.69:0,15,342	0/0:23,0:24:58.51:0,59,582	0/0:22,2:22:17.98:0,18,554	1/1:3,5:8:14.97:123,15,0	0/0:26,0:26:57.12:0,57,590	0/0:16,0:16:26.73:0,27,256	0/0:17,0:16:45.11:0,45,478
chr10	105842617	.	AAGAAAGAAAGAAAG	A	2527.12	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.105;DP=477;FS=0.593;HRun=0;HaplotypeScore=179.8494;InbreedingCoeff=0.9218;MQ=56.11;MQ0=6;MQRankSum=-5.656;QD=49.55;ReadPosRankSum=-3.421;VQSLOD=2.5919;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.17:0,51,2008	1/1:8,0:8:21.06:394,21,0	0/0:9,0:2:6.02:0,6,78	0/0:13,0:3:5.94:0,6,43	0/0:28,0:28:81.26:0,81,4324	1/1:8,6:13:36.12:1175,36,0	1/1:16,0:13:39.03:724,39,0	0/0:33,0:33:84.68:0,85,2336	0/0:13,0:13:36.12:0,36,1638	0/0:18,0:18:51.12:0,51,2266	0/0:27,0:27:78.25:0,78,3796	0/0:6,0:6:17.99:0,18,651	0/0:10,0:10:30.10:0,30,1264	0/0:5,0:5:15.05:0,15,609	0/0:17,0:17:48.10:0,48,2073	0/0:12,0:12:36.09:0,36,1498	0/0:23,0:23:69.20:0,69,3289	0/0:21,0:21:53.97:0,54,2295	0/0:21,0:20:58.30:0,58,1515	0/0:19,0:19:45.15:0,45,2031	0/0:6,0:6:12.04:0,12,269	0/0:18,0:18:54.18:0,54,2884	0/0:25,0:25:72.22:0,72,3027	0/0:18,0:16:48.16:0,48,2904	1/1:13,0:13:29.29:393,29,0	0/0:31,0:30:84.23:0,84,4174	0/0:12,0:12:13.03:0,13,607	0/0:21,0:20:57.15:0,57,2933
chr10	105842629	.	AAG	A	965.72	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.586;DP=489;FS=0.646;HRun=0;HaplotypeScore=81.9082;InbreedingCoeff=0.9435;MQ=61.28;MQ0=5;MQRankSum=-4.833;QD=22.46;ReadPosRankSum=-0.203;VQSLOD=3.5218;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.08:0,51,627	1/1:3,3:6:17.77:201,18,0	0/0:11,0:5:14.93:0,15,128	0/0:14,0:7:11.89:0,12,97	0/0:28,0:28:81.23:0,81,1196	1/1:6,6:10:30.10:404,30,0	1/1:6,8:12:32.17:380,32,0	0/0:41,0:41:96.66:0,97,529	0/0:16,0:16:38.99:0,39,548	0/0:18,0:18:51.13:0,51,680	0/0:26,0:26:78.21:0,78,1080	0/0:6,0:6:17.97:0,18,158	0/0:10,0:10:30.06:0,30,369	0/0:5,0:5:15.04:0,15,196	0/0:15,0:15:45.12:0,45,594	0/0:13,0:13:35.84:0,36,444	0/0:23,0:23:69.03:0,69,886	0/0:16,0:16:45:0,45,634	0/0:24,0:23:58.45:0,58,361	0/0:22,0:22:56.85:0,57,502	0/0:7,0:7:10.48:0,10,36	0/0:19,0:19:56.98:0,57,766	0/0:25,0:25:69.91:0,70,846	0/0:21,0:21:63.15:0,63,850	1/1:4,7:11:17.12:139,17,0	0/0:30,0:29:81.15:0,81,1146	0/0:13,0:13:7.82:0,8,50	0/0:24,0:23:69.18:0,69,931
chr10	105842630	.	AG	A	558.47	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.113;DP=489;FS=6.262;HRun=1;HaplotypeScore=74.7408;InbreedingCoeff=0.9430;MQ=61.43;MQ0=4;MQRankSum=-5.522;QD=12.99;ReadPosRankSum=-0.652;VQSLOD=1.9995;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.09:0,51,566	1/1:4,2:6:17.72:134,18,0	0/0:11,0:5:14.82:0,15,133	0/0:12,1:7:11.83:0,12,90	0/0:28,0:28:81.17:0,81,969	1/1:12,0:10:29.46:190,29,0	1/1:12,2:12:32.82:279,33,0	0/0:40,0:40:99:0,105,621	0/0:16,0:16:40.62:0,41,479	0/0:18,0:18:48.84:0,49,581	0/0:27,0:27:78.09:0,78,881	0/0:6,0:6:17.48:0,17,147	0/0:10,0:10:30.06:0,30,329	0/0:5,0:5:15.04:0,15,169	0/0:15,0:15:45.08:0,45,504	0/0:13,0:13:33.56:0,34,392	0/0:23,0:23:68.14:0,68,724	0/0:16,0:16:45.04:0,45,531	0/0:24,0:24:59.26:0,59,383	0/0:22,0:22:56.50:0,56,401	0/0:7,0:7:11:0,11,52	0/0:19,0:19:53.48:0,53,616	0/0:26,0:26:73.17:0,73,774	0/0:22,0:22:66.02:0,66,722	1/1:9,2:11:15.99:113,16,0	0/0:29,0:28:78.86:0,79,951	0/0:14,0:14:7.73:0,8,37	0/0:24,0:23:69.07:0,69,781
chr10	105842631	.	G	GA	988.25	PASS	AB=0.925;AC=18;AF=0.321;AN=56;BaseQRankSum=10.087;DP=495;FS=11.964;HRun=10;HaplotypeScore=75.3294;InbreedingCoeff=0.7734;MQ=61.50;MQ0=4;MQRankSum=-1.956;QD=5.88;ReadPosRankSum=-3.773;VQSLOD=-0.1376;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:44.95:0,45,369	1/1:6,0:6:13.72:72,14,0	0/0:11,0:5:12.83:0,13,92	0/0:13,0:7:11.64:0,12,87	0/0:28,0:28:74.91:0,75,615	0/1:12,0:10:9.67:10,0,14	1/1:14,0:12:10.69:55,11,0	1/1:39,0:39:70.98:354,71,0	0/1:14,3:17:18.71:19,0,275	0/0:18,0:18:38.93:0,39,320	0/0:27,0:27:46.17:0,46,497	0/0:6,0:6:11.94:0,12,93	0/0:10,0:10:23.97:0,24,197	0/0:5,0:5:14.98:0,15,123	0/0:15,0:15:38.95:0,39,320	0/0:13,0:13:32.96:0,33,271	0/0:23,0:23:47.90:0,48,394	0/0:17,0:17:41.91:0,42,345	1/1:25,0:25:50.49:234,50,0	1/1:22,0:22:50.69:327,51,0	1/1:7,0:7:10.96:50,11,0	0/0:18,0:19:46.97:0,47,375	0/0:27,0:27:58.72:0,59,470	0/0:22,0:22:59.85:0,60,481	1/1:10,1:11:8.90:55,9,0	0/0:30,0:29:71.89:0,72,591	1/1:15,0:15:2.34:9,2,0	0/0:24,1:24:30.92:0,31,461
chr10	105842634	.	A	AGAAAGAAAG	4534.43	PASS	AB=0.944;AC=11;AF=0.196;AN=56;BaseQRankSum=-10.997;DP=499;FS=7.409;HRun=0;HaplotypeScore=145.6369;InbreedingCoeff=0.8332;MQ=63.78;MQ0=4;MQRankSum=-3.040;QD=35.43;ReadPosRankSum=-2.766;VQSLOD=3.5825;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.15:0,45,926	0/0:6,0:6:12.97:0,13,82	0/0:12,0:6:15.77:0,16,174	0/0:14,0:8:13.70:0,14,120	0/0:28,0:28:78.26:0,78,2115	0/0:13,0:11:32.97:0,33,573	0/0:14,0:12:29.97:0,30,234	1/1:5,0:40:99:1230,105,0	0/0:16,0:16:39.20:0,39,883	0/0:17,0:17:48.12:0,48,1104	0/0:28,0:28:81.21:0,81,1742	0/0:5,0:5:12.04:0,12,186	0/0:10,0:10:30.08:0,30,556	0/0:5,0:5:15.05:0,15,347	0/0:15,0:15:45.14:0,45,992	0/0:15,0:15:42.08:0,42,806	0/0:22,0:23:66.18:0,66,1386	0/1:16,0:17:29.57:30,0,1077	1/1:2,0:23:62.59:1093,63,0	1/1:0,21:25:57.17:1557,57,0	1/1:0,0:6:12.03:208,12,0	0/0:19,0:19:57.19:0,57,1315	0/0:24,0:24:72.14:0,72,1382	0/0:25,0:25:72.21:0,72,1541	0/0:11,0:11:7.95:0,8,55	0/0:30,0:29:84.22:0,84,1917	1/1:0,14:17:9.97:416,10,0	0/0:25,0:24:72.22:0,72,1591
chr10	105843671	.	A	AT	1111.93	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.055;DP=426;FS=9.862;HRun=9;HaplotypeScore=43.9102;InbreedingCoeff=0.9073;MQ=72.65;MQ0=1;MQRankSum=2.730;QD=24.71;ReadPosRankSum=1.870;VQSLOD=3.9922;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.45:0,72,626	1/1:0,5:5:15.04:166,15,0	0/0:16,0:15:29.66:0,30,232	0/0:10,0:8:8.45:0,8,70	0/0:10,0:10:29.99:0,30,260	1/1:1,17:20:33.77:567,34,0	1/1:2,3:5:6.02:66,6,0	0/0:28,1:29:47.67:0,48,625	0/0:14,0:14:38.97:0,39,335	0/0:18,0:18:53.98:0,54,466	0/0:12,0:12:29.99:0,30,260	0/0:5,0:5:15:0,15,130	0/0:12,0:12:23.99:0,24,208	0/0:7,0:7:18:0,18,156	0/0:21,0:21:56.97:0,57,491	0/0:10,0:10:29.99:0,30,260	0/0:32,0:31:65.95:0,66,568	0/0:21,0:21:56.99:0,57,495	0/0:35,0:34:92.98:0,93,807	0/0:5,0:5:15:0,15,130	0/0:11,0:11:26.90:0,27,217	0/0:2,0:2:6:0,6,52	0/0:8,0:8:24:0,24,208	0/0:12,0:12:35.99:0,36,313	1/1:0,15:15:42.11:465,42,0	0/0:22,0:22:62.99:0,63,547	0/0:19,0:19:50.99:0,51,443	0/0:23,0:23:68.89:0,69,582
chr10	105844980	.	A	AGG	1107.13	PASS	AB=0.875;AC=10;AF=0.185;AN=54;BaseQRankSum=-3.923;DP=200;FS=2.336;HRun=2;HaplotypeScore=22.7568;InbreedingCoeff=0.6282;MQ=47.98;MQ0=30;MQRankSum=0.509;QD=23.07;ReadPosRankSum=-1.568;VQSLOD=1.3699;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:11:25.26:0,25,312	1/1:0,4:4:12.04:224,12,0	0/0:12,0:4:6.02:0,6,88	0/0:10,0:6:14.85:0,15,155	0/0:3,0:3:3.48:0,3,45	0/0:7,0:7:15:0,15,180	0/0:7,0:7:20.99:0,21,254	1/1:3,4:5:11.96:186,12,0	0/0:6,0:6:18.03:0,18,225	0/0:2,0:2:6:0,6,68	./.	0/0:5,0:5:11.64:0,12,124	0/0:3,0:2:3.01:0,3,44	0/0:7,0:6:14.31:0,14,200	0/0:9,0:7:18.04:0,18,265	0/0:9,0:8:24.08:0,24,339	0/0:14,0:12:25.29:0,25,354	0/0:8,0:8:21.04:0,21,269	0/1:6,3:7:53.52:119,0,54	0/1:4,0:3:0:0,0,0	1/1:7,10:12:24.08:449,24,0	0/0:2,0:2:2.99:0,3,24	0/0:3,0:2:6.01:0,6,69	0/0:10,0:8:21.07:0,21,306	0/0:8,0:6:12.03:0,12,157	0/0:6,0:6:18.03:0,18,221	1/1:2,5:6:15.05:281,15,0	0/0:5,0:4:11.97:0,12,150
chr10	105845248	.	TGTTGTTGTTGTC	T	4403.09	PASS	AB=0.556;AC=7;AF=0.125;AN=56;BaseQRankSum=10.069;DP=596;FS=5.432;HRun=0;HaplotypeScore=212.6565;InbreedingCoeff=0.8549;MQ=69.79;MQ0=0;MQRankSum=-9.784;QD=74.63;ReadPosRankSum=0.398;VQSLOD=3.8028;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,6954	1/1:0,10:10:20.96:604,21,0	0/0:29,0:28:78.26:0,78,3553	0/0:27,0:27:60.19:0,60,2798	0/0:11,0:11:30.10:0,30,1434	1/1:4,12:16:48.16:1536,48,0	1/1:11,7:18:32.96:854,33,0	0/0:33,0:33:84.26:0,84,4056	0/0:21,0:21:60.19:0,60,3223	0/0:25,0:25:66.22:0,66,3450	0/0:16,0:16:48.16:0,48,2300	0/0:19,0:19:54.19:0,54,2951	0/0:20,0:20:57.17:0,57,2815	0/0:19,0:19:54.19:0,54,2990	0/0:24,0:24:72.20:0,72,3582	0/0:27,0:27:72.25:0,72,3921	0/0:28,0:28:84.22:0,84,4282	0/0:25,0:25:66.23:0,66,3509	0/0:15,0:15:45.15:0,45,2446	0/0:9,0:9:21.07:0,21,1007	0/0:14,0:14:36.12:0,36,1789	0/0:14,0:14:42.13:0,42,2238	0/0:15,0:15:42.14:0,42,2340	0/0:28,0:28:84.29:0,84,4621	0/1:3,12:15:8.80:1409,0,9	0/0:24,0:23:63.20:0,63,3290	0/0:37,0:37:99:0,111,5831	0/0:14,0:14:39.13:0,39,1855
chr10	105845288	.	G	GAC	2617.82	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.270;DP=621;FS=7.742;HRun=0;HaplotypeScore=98.6072;InbreedingCoeff=0.9986;MQ=80.00;MQ0=0;MQRankSum=-9.654;QD=48.48;ReadPosRankSum=1.752;VQSLOD=4.5695;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,150,2386	0/0:13,0:13:33.08:0,33,510	0/0:24,0:24:72.23:0,72,1113	0/0:16,0:16:42.14:0,42,666	0/0:17,0:17:51.17:0,51,832	1/1:1,19:20:51.17:978,51,0	1/1:0,16:16:45.15:859,45,0	0/0:28,0:28:84.26:0,84,1302	0/0:20,0:20:57.19:0,57,930	0/0:26,0:26:78.26:0,78,1250	0/0:14,0:14:42.11:0,42,655	0/0:23,0:23:66.22:0,66,1061	0/0:14,0:14:39.13:0,39,632	0/0:22,0:22:66.22:0,66,1055	0/0:36,0:36:99:0,108,1714	0/0:27,0:27:81.27:0,81,1293	0/0:28,0:28:81.26:0,81,1277	0/0:26,0:26:78.25:0,78,1248	0/0:22,0:22:63.22:0,63,1025	0/0:11,0:11:24.08:0,24,390	0/0:20,0:20:60.20:0,60,979	0/0:19,0:19:57.19:0,57,930	0/0:11,0:11:30.10:0,30,489	0/0:25,0:25:75.21:0,75,1188	1/1:1,16:18:48.16:923,48,0	0/0:26,0:26:78.27:0,78,1272	0/0:38,0:38:99:0,111,1753	0/0:9,0:9:27.09:0,27,441
chr10	105845824	.	T	TCACA	2215.44	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=-2.888;DP=787;FS=1.159;HRun=0;HaplotypeScore=121.3722;InbreedingCoeff=0.8040;MQ=56.82;MQ0=13;MQRankSum=1.138;QD=11.54;ReadPosRankSum=-1.278;VQSLOD=2.9338;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:44:63.26:0,63,894	1/1:2,0:6:6.02:104,6,0	./.	0/0:64,0:19:6.01:0,6,75	0/0:14,0:14:17.63:0,18,203	0/0:20,0:22:32.79:0,33,442	0/0:39,0:42:46.99:0,47,738	1/1:34,0:34:35.84:513,36,0	0/0:28,0:29:45.37:0,45,652	0/0:30,0:29:18.34:0,18,442	0/0:10,0:10:12.04:0,12,190	0/0:25,0:25:45.40:0,45,681	0/0:23,0:22:39.13:0,39,594	0/0:27,0:29:36.78:0,37,618	0/0:31,0:36:51.15:0,51,761	0/0:17,0:19:39.13:0,39,602	0/0:34,0:33:66.13:0,66,940	0/0:24,0:25:38.51:0,39,638	1/1:7,1:10:11.73:130,12,0	1/1:11,5:19:12.04:285,12,0	1/1:33,34:74:38.54:815,39,0	1/1:14,0:16:5.49:25,5,0	0/0:12,0:13:2.02:0,2,118	0/0:41,0:46:54.73:0,55,1232	0/0:19,0:20:27.08:0,27,411	0/0:26,0:26:30.07:0,30,432	1/1:11,11:22:23.81:516,24,0	0/1:7,0:7:9.60:10,0,30
chr10	105846033	.	CTGTGTG	C	1126.99	PASS	AC=14;AF=0.269;AN=52;BaseQRankSum=4.129;DP=369;FS=0.000;HRun=0;HaplotypeScore=83.9124;InbreedingCoeff=0.7415;MQ=63.55;MQ0=8;MQRankSum=-5.913;QD=11.38;ReadPosRankSum=-2.382;VQSLOD=1.6590;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:24.06:0,24,657	./.	0/0:13,0:10:3.01:0,3,37	0/0:12,0:6:3:0,3,30	0/0:12,0:12:12.04:0,12,348	1/1:6,5:11:6.02:124,6,0	1/1:9,9:18:18.06:359,18,0	./.	0/0:16,0:16:24.07:0,24,696	0/0:12,0:11:12.50:0,13,256	0/0:3,0:3:6.02:0,6,178	0/0:14,0:14:24.54:0,25,618	0/0:6,0:7:12.83:0,13,238	0/0:14,0:14:18.06:0,18,528	0/0:17,0:17:27.09:0,27,799	0/0:4,0:4:6.02:0,6,196	0/0:20,0:19:21.07:0,21,678	0/0:5,0:7:15.05:0,15,342	1/1:8,0:7:3.01:62,3,0	1/1:14,0:14:6.02:92,6,0	1/1:26,1:25:12.04:202,12,0	0/0:14,0:14:15.03:0,15,397	0/0:12,0:12:14.63:0,15,487	0/0:21,0:24:42.14:0,42,1150	1/1:3,6:10:18.06:351,18,0	0/0:13,0:13:21.07:0,21,587	1/1:11,0:11:6.02:104,6,0	0/0:5,0:5:3.01:0,3,98
chr10	105846062	.	TGTGTGTAG	T	1033.26	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=5.659;DP=327;FS=6.138;HRun=0;HaplotypeScore=85.4458;InbreedingCoeff=0.5266;MQ=54.94;MQ0=24;MQRankSum=-6.202;QD=9.06;ReadPosRankSum=-0.640;VQSLOD=1.2934;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:30.08:0,30,880	0/0:1,0:1:3.01:0,3,37	0/1:26,0:9:6.37:6,0,122	0/0:23,0:7:15.32:0,15,144	0/0:13,0:13:27.09:0,27,675	0/1:15,0:15:12.24:12,0,298	0/1:21,0:17:99:126,0,261	1/1:3,0:3:8.95:85,9,0	0/0:11,0:11:33.10:0,33,1040	0/0:14,0:13:30.91:0,31,699	0/0:5,0:5:15.05:0,15,354	0/0:13,0:13:32.80:0,33,925	0/0:7,0:7:12.93:0,13,372	0/0:8,0:8:21.07:0,21,749	0/0:14,0:14:36.12:0,36,1134	0/0:3,0:3:9.03:0,9,307	0/0:13,0:12:30.10:0,30,922	0/0:8,0:8:24.08:0,24,675	1/1:7,1:7:17.43:192,17,0	1/1:1,4:5:5.99:102,6,0	1/1:16,1:16:22.57:298,23,0	0/0:15,0:15:27.08:0,27,663	0/0:15,0:15:35.77:0,36,1002	0/0:17,0:17:47.19:0,47,1648	0/1:12,0:12:99:194,0,112	0/0:10,0:10:24.08:0,24,826	1/1:5,1:6:14.25:190,14,0	0/0:2,0:2:3.01:0,3,98
chr10	105846085	.	G	GA	615.78	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=2.475;DP=307;FS=6.635;HRun=0;HaplotypeScore=53.4739;InbreedingCoeff=0.5499;MQ=60.49;MQ0=15;MQRankSum=-1.635;QD=5.26;ReadPosRankSum=-3.027;VQSLOD=1.5576;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:26.99:0,27,307	0/1:2,0:2:0.90:32,0,1	0/0:30,1:9:21.20:0,21,197	0/1:31,0:15:9.29:9,0,118	0/0:11,0:11:27.08:0,27,358	0/1:16,0:16:17.55:18,0,34	0/1:16,0:14:17.49:17,0,39	1/1:2,8:10:23.58:188,24,0	0/0:11,0:11:29.09:0,29,334	0/0:10,0:10:29.55:0,30,351	0/0:6,0:6:18.05:0,18,234	0/0:4,1:5:12.03:0,12,152	0/0:3,0:3:9.03:0,9,125	0/0:5,0:5:10.58:0,11,129	0/0:14,0:14:36.08:0,36,438	0/0:5,0:5:15.02:0,15,189	0/0:14,0:13:38.99:0,39,414	0/0:7,0:7:21.03:0,21,254	1/1:3,0:3:9.02:100,9,0	1/1:3,1:4:11.59:101,12,0	1/1:14,0:12:17.63:155,18,0	0/0:15,0:15:32.89:0,33,354	0/0:12,0:12:33.10:0,33,437	0/0:17,0:17:44.85:0,45,503	0/1:13,0:13:29.55:50,0,30	0/0:8,0:8:21.03:0,21,231	1/1:6,2:7:13.57:127,14,0	0/0:6,0:5:11.99:0,12,101
chr10	105846192	.	GT	G	552.51	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.765;DP=381;FS=2.965;HRun=8;HaplotypeScore=50.8976;InbreedingCoeff=0.8825;MQ=81.62;MQ0=1;MQRankSum=-2.015;QD=16.74;ReadPosRankSum=2.863;VQSLOD=3.5823;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:33.01:0,33,365	0/0:5,0:5:2.63:0,3,24	0/0:33,0:22:32.44:0,32,292	0/0:28,0:16:15.32:0,15,86	0/0:11,0:12:29.93:0,30,318	1/1:1,13:14:33.05:317,33,0	1/1:0,7:7:18.03:173,18,0	0/0:18,0:18:42.08:0,42,459	0/0:12,0:12:26.65:0,27,315	0/0:18,0:18:48.58:0,49,527	0/0:10,0:10:24.03:0,24,273	0/0:13,0:13:36.11:0,36,434	0/0:5,0:5:15.05:0,15,181	0/0:8,0:8:15.02:0,15,170	0/0:15,0:15:30.05:0,30,320	0/0:8,0:8:21.05:0,21,244	0/0:23,0:23:63.15:0,63,735	0/0:19,0:19:45.12:0,45,531	0/0:21,0:20:51.03:0,51,531	0/0:12,0:12:32.90:0,33,339	0/0:8,0:8:24.01:0,24,260	0/0:10,0:10:21.05:0,21,235	0/0:9,0:9:24.05:0,24,267	0/0:11,0:11:30.06:0,30,330	1/1:2,10:12:21.03:202,21,0	0/0:18,0:18:50.86:0,51,461	0/0:8,0:8:21.02:0,21,235	0/0:11,0:11:6.58:0,7,302
chr10	105846568	.	G	GA	1293.44	PASS	AB=0.967;AC=7;AF=0.125;AN=56;BaseQRankSum=-6.536;DP=555;FS=2.669;HRun=9;HaplotypeScore=62.7203;InbreedingCoeff=0.7831;MQ=88.04;MQ0=1;MQRankSum=-1.062;QD=15.22;ReadPosRankSum=0.316;VQSLOD=3.8462;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:65.99:0,66,573	0/0:6,0:6:18:0,18,156	0/0:33,0:28:43.29:0,43,352	0/1:28,1:24:32.64:33,0,89	0/0:20,0:20:50.98:0,51,443	1/1:3,17:20:5:499,5,0	1/1:4,12:16:30.08:332,30,0	0/0:33,0:32:80.98:0,81,703	0/0:12,0:12:29.98:0,30,260	0/0:23,0:23:62.95:0,63,541	0/0:18,0:18:38.88:0,39,335	0/0:16,0:16:44.99:0,45,391	0/0:18,0:18:50.99:0,51,443	0/0:10,0:11:32.03:0,32,266	0/0:25,0:25:65.96:0,66,569	0/0:17,0:17:47.98:0,48,417	0/0:19,0:19:53.99:0,54,468	0/0:16,0:16:44.92:0,45,377	0/0:33,0:34:77:0,77,657	0/0:18,0:18:44.99:0,45,391	0/0:16,0:16:41.97:0,42,359	0/0:9,0:9:20.98:0,21,182	0/0:26,0:26:65.98:0,66,573	0/0:5,0:5:14.98:0,15,126	1/1:2,18:20:31.10:571,31,0	0/0:19,0:19:56.99:0,57,495	0/0:29,0:29:74.96:0,75,646	0/0:21,1:22:32.81:0,33,514
chr10	105846800	.	T	TC	1211.89	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.526;DP=619;FS=9.711;HRun=3;HaplotypeScore=62.2424;InbreedingCoeff=0.8586;MQ=55.37;MQ0=11;MQRankSum=-5.429;QD=22.44;ReadPosRankSum=-0.709;VQSLOD=2.0940;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:81.23:0,81,958	0/0:5,0:5:9.03:0,9,108	0/0:14,0:5:2.97:0,3,21	0/0:13,0:3:6.02:0,6,72	0/0:19,0:19:54.16:0,54,640	1/1:0,12:12:24.08:335,24,0	1/1:8,15:18:7.13:488,7,0	0/0:18,0:17:42.13:0,42,504	0/0:20,0:19:54.15:0,54,636	0/0:28,0:28:75.22:0,75,892	0/0:19,0:19:48.15:0,48,576	0/0:30,0:30:90.26:0,90,1069	0/0:13,0:13:36.11:0,36,432	0/0:14,0:14:42.13:0,42,504	0/0:25,0:25:72.22:0,72,863	0/0:30,0:30:84.26:0,84,1008	0/0:42,0:42:99:0,111,1319	0/0:22,0:22:63.13:0,63,725	0/0:31,0:30:81.25:0,81,970	0/0:19,0:18:51.16:0,51,612	0/0:30,0:30:81.25:0,81,968	0/0:23,0:23:63.19:0,63,756	0/0:15,0:15:36.11:0,36,432	0/0:26,0:26:69.21:0,69,827	1/1:2,17:18:39.09:523,39,0	0/0:26,0:26:78.24:0,78,936	0/0:32,0:32:87.25:0,87,1032	0/0:19,0:19:57.17:0,57,684
chr10	105847627	.	AAC	A	447.80	PASS	AB=0.967;AC=9;AF=0.161;AN=56;BaseQRankSum=11.519;DP=679;FS=8.674;HRun=0;HaplotypeScore=119.6499;InbreedingCoeff=0.5333;MQ=69.36;MQ0=7;MQRankSum=-3.572;QD=3.47;ReadPosRankSum=-2.133;VQSLOD=1.6075;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,2106	1/1:11,3:14:16.43:138,16,0	0/0:32,0:23:59.52:0,60,817	0/0:47,0:31:57.25:0,57,1065	0/0:26,0:26:75.25:0,75,1245	0/0:24,0:24:71.06:0,71,474	0/0:18,0:18:10.80:0,11,228	0/1:22,0:22:43.13:79,0,43	0/0:30,0:30:87.27:0,87,1441	0/0:34,0:34:99:0,99,1619	0/0:20,0:20:60.21:0,60,1055	0/0:23,0:23:69.22:0,69,1126	0/0:15,0:15:45.13:0,45,749	0/0:17,0:17:51.14:0,51,830	0/0:27,0:27:78.23:0,78,1341	0/0:15,0:15:42.14:0,42,740	0/0:30,0:29:87.24:0,87,1471	0/0:14,0:14:40.02:0,40,641	0/1:24,3:25:15.98:135,0,16	1/1:24,1:25:2.73:74,3,0	1/1:15,0:15:17.17:114,17,0	0/0:23,0:23:69.23:0,69,1184	0/0:28,0:27:81.28:0,81,1394	0/0:21,0:21:57.62:0,58,974	0/0:19,1:20:27.18:0,27,285	0/0:30,0:30:90.27:0,90,1505	0/1:26,0:26:21.63:57,0,22	0/0:13,0:13:39.13:0,39,672
chr10	105847628	.	AC	A	4078.88	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=10.318;DP=670;FS=5.571;HRun=1;HaplotypeScore=93.2386;InbreedingCoeff=0.8892;MQ=68.22;MQ0=7;MQRankSum=-2.880;QD=28.13;ReadPosRankSum=-3.564;VQSLOD=2.2955;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,1721	1/1:12,2:14:42.01:478,42,0	0/0:31,0:23:59.95:0,60,734	0/0:44,0:28:60.70:0,61,900	0/0:25,0:25:75.23:0,75,1045	0/0:24,0:24:45.54:0,46,128	0/1:18,0:18:36.95:38,0,37	1/1:11,10:21:56.80:650,57,0	0/0:29,0:29:87.25:0,87,1185	0/0:34,0:34:99:0,99,1371	0/0:20,0:20:60.20:0,60,850	0/0:23,0:23:69.22:0,69,963	0/0:15,0:15:45.13:0,45,620	0/0:19,0:19:57.12:0,57,729	0/0:27,0:27:78.23:0,78,1077	0/0:14,0:14:42.14:0,42,599	0/0:30,0:29:87.24:0,87,1199	0/0:14,0:14:40.63:0,41,516	1/1:12,15:25:75.01:749,75,0	1/1:21,4:25:74.90:854,75,0	1/1:11,3:14:41.87:423,42,0	0/0:23,0:23:69.23:0,69,983	0/0:28,0:27:81.22:0,81,1101	0/0:20,0:20:57.60:0,58,771	0/0:19,0:19:8.96:0,9,52	0/0:30,0:30:90.26:0,90,1235	1/1:18,8:26:77.90:887,78,0	0/0:13,0:13:39.13:0,39,556
chr10	105847637	.	C	CA	5229.76	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.915;DP=672;FS=29.584;HRun=6;HaplotypeScore=89.8456;InbreedingCoeff=0.9998;MQ=71.47;MQ0=6;MQRankSum=-3.077;QD=25.89;ReadPosRankSum=-1.902;VQSLOD=2.5704;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,108,1099	1/1:9,4:13:35.90:407,36,0	0/0:25,0:18:42.88:0,43,399	0/0:37,0:26:39.05:0,39,464	0/0:26,0:26:78.18:0,78,795	1/1:4,22:26:60.19:755,60,0	1/1:6,16:22:33.10:411,33,0	1/1:17,8:25:65.67:646,66,0	0/0:28,0:28:84.18:0,84,850	0/0:33,0:33:90.20:0,90,914	0/0:21,0:21:54.12:0,54,550	0/0:21,0:21:57.11:0,57,575	0/0:13,0:13:36.05:0,36,353	0/0:19,0:19:51.11:0,51,519	0/0:28,0:28:78.14:0,78,781	0/0:15,0:15:39.07:0,39,392	0/0:31,0:30:78.17:0,78,794	0/0:16,0:16:31.68:0,32,352	1/1:10,16:24:56.86:554,57,0	1/1:22,5:27:77.57:784,78,0	1/1:10,4:14:33.30:360,33,0	0/0:22,0:22:60.12:0,60,607	0/0:28,0:27:72.15:0,72,728	0/0:20,0:20:41.61:0,42,428	1/1:0,23:23:54.17:680,54,0	0/0:30,0:30:84.17:0,84,852	1/1:21,5:26:65.34:634,65,0	0/0:14,0:14:36.08:0,36,367
chr10	105848486	.	TTTTC	T	433.12	PASS	AB=1.000;AC=18;AF=0.375;AN=48;BaseQRankSum=6.056;DP=503;FS=8.684;HRun=0;HaplotypeScore=87.9840;InbreedingCoeff=0.6585;MQ=60.39;MQ0=2;MQRankSum=-4.676;QD=3.09;ReadPosRankSum=-0.728;VQSLOD=0.6891;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:22:24.05:0,24,387	1/1:8,0:8:2.81:26,3,0	./.	./.	0/0:37,1:38:8.22:0,8,1081	1/1:10,0:10:5.68:37,6,0	0/1:11,0:11:7.82:8,0,49	./.	1/1:9,9:18:9.03:124,9,0	0/0:19,0:19:18.01:0,18,356	0/0:17,0:17:18.06:0,18,410	1/1:9,0:9:6.02:92,6,0	0/0:14,0:14:24.08:0,24,494	0/0:13,0:13:21.07:0,21,475	0/0:28,0:28:45.15:0,45,927	0/0:16,0:16:36.12:0,36,794	0/0:24,0:24:36.03:0,36,604	0/0:17,0:18:30.10:0,30,617	1/1:25,0:24:17.81:136,18,0	1/1:15,0:15:8.90:61,9,0	1/1:7,0:6:5.86:35,6,0	0/0:12,0:12:15.05:0,15,325	0/1:13,0:13:15.26:15,0,451	0/0:17,0:17:18.06:0,18,356	1/1:24,0:24:8.88:69,9,0	0/0:27,0:27:48.15:0,48,928	./.	0/0:23,0:23:1.97:0,2,788
chr10	105848526	.	CTTTCTTTCT	C	977.89	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=7.995;DP=459;FS=2.869;HRun=0;HaplotypeScore=126.0331;InbreedingCoeff=0.5462;MQ=58.76;MQ0=11;MQRankSum=-6.429;QD=11.50;ReadPosRankSum=-2.011;VQSLOD=2.0352;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:33.07:0,33,979	1/1:4,0:4:11.86:108,12,0	0/0:14,0:1:2.98:0,3,21	0/0:21,0:8:7.51:0,8,64	0/0:26,0:26:69.21:0,69,2398	1/1:11,0:11:30.02:362,30,0	0/1:12,0:12:21.20:151,0,21	0/0:9,0:7:4.51:0,5,26	0/0:18,0:18:30.09:0,30,420	0/0:17,0:17:41.50:0,42,959	0/0:19,0:19:38.86:0,39,1053	0/0:7,0:7:18.04:0,18,262	0/0:13,0:13:36.10:0,36,952	0/0:16,0:16:44.98:0,45,1154	0/0:26,0:26:72.19:0,72,2032	0/0:24,0:24:69.22:0,69,1835	0/0:26,0:26:67.31:0,67,1655	0/0:23,0:21:53.22:0,53,1261	0/1:19,0:18:41.27:144,0,41	0/1:13,0:13:0.76:44,0,1	1/1:10,0:8:0.74:40,1,0	0/0:15,0:15:33.11:0,33,848	0/0:17,0:17:28.60:0,29,1138	0/0:8,0:7:21.05:0,21,670	1/1:4,12:16:12.04:285,12,0	0/0:27,0:27:62.78:0,63,1830	0/0:14,0:11:1.51:0,2,34	0/0:16,0:16:29.82:0,30,1110
chr10	105848533	.	TC	T	905.05	PASS	AB=0.865;AC=17;AF=0.315;AN=54;BaseQRankSum=11.377;DP=468;FS=1.590;HRun=1;HaplotypeScore=65.7113;InbreedingCoeff=0.6996;MQ=59.47;MQ0=11;MQRankSum=-10.181;QD=7.30;ReadPosRankSum=-2.182;VQSLOD=-0.1071;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:35.94:0,36,341	1/1:4,0:4:0.91:33,1,0	./.	0/0:24,0:10:9.91:0,10,98	0/0:24,0:24:69.10:0,69,966	1/1:11,0:11:31.21:179,31,0	0/1:13,0:13:6.45:104,0,6	1/1:5,3:7:14.51:79,15,0	0/0:16,1:17:0.65:0,1,246	0/0:18,0:18:51.08:0,51,688	0/0:18,0:18:45.15:0,45,636	0/1:6,0:6:1.78:2,0,101	0/0:12,0:12:36.10:0,36,491	0/0:15,0:15:45.14:0,45,620	0/0:28,0:28:75.13:0,75,979	0/0:25,0:25:75.21:0,75,1005	0/0:27,0:27:53.09:0,53,854	0/0:22,2:22:4.22:0,4,637	1/1:21,4:24:48.05:319,48,0	1/1:10,4:14:27.83:167,28,0	1/1:8,3:10:16.25:108,16,0	0/0:15,0:15:39.10:0,39,518	0/0:17,0:17:33.79:0,34,636	0/0:9,0:8:24.04:0,24,311	1/1:13,0:13:11.61:65,12,0	0/0:22,0:22:65.80:0,66,908	0/1:6,13:16:3.93:32,0,4	0/0:17,0:17:31.96:0,32,642
chr10	105848534	.	CT	C	450.10	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=7.634;DP=474;FS=9.757;HRun=4;HaplotypeScore=69.5768;InbreedingCoeff=0.4038;MQ=59.15;MQ0=13;MQRankSum=-6.066;QD=4.02;ReadPosRankSum=0.928;VQSLOD=-0.5762;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:35.35:0,35,294	0/1:3,0:3:11.22:37,0,11	0/0:15,0:1:2.98:0,3,21	0/0:24,0:10:12.45:0,12,100	0/0:23,0:23:68.02:0,68,904	1/1:3,8:11:21.43:283,21,0	1/1:5,8:13:0.88:119,1,0	0/0:7,0:7:10.92:0,11,58	0/0:18,0:18:21.29:0,21,291	0/0:18,0:18:51:0,51,672	0/0:19,0:19:50.89:0,51,656	0/0:6,0:6:11.25:0,11,137	0/0:12,0:12:33.11:0,33,454	0/0:15,0:15:44.98:0,45,592	0/0:27,0:27:66.21:0,66,893	0/0:25,0:25:72.24:0,72,988	0/0:26,1:26:56.86:0,57,806	0/0:27,0:25:25.63:0,26,656	0/1:23,0:24:63.21:65,0,63	0/1:12,0:14:6.70:7,0,23	0/1:12,0:12:1.42:11,0,1	0/0:15,0:15:39.11:0,39,504	0/0:17,0:17:48.16:0,48,659	0/0:10,0:8:21.07:0,21,291	1/1:12,1:13:9.89:66,10,0	0/0:22,0:22:63.19:0,63,831	0/1:18,0:17:11.88:12,0,37	0/0:17,0:17:45.03:0,45,589
chr10	105848538	.	TC	T	1106.24	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=10.728;DP=477;FS=7.832;HRun=1;HaplotypeScore=66.0323;InbreedingCoeff=0.7350;MQ=58.87;MQ0=15;MQRankSum=-9.683;QD=7.14;ReadPosRankSum=-2.672;VQSLOD=-0.6157;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:24.98:0,25,365	1/1:1,2:3:6.49:78,6,0	0/0:16,0:1:3.01:0,3,31	0/0:24,0:10:11.08:0,11,79	0/0:25,0:25:66.06:0,66,777	1/1:9,0:9:24.80:116,25,0	1/1:13,0:13:16.85:95,17,0	1/1:5,3:7:15.36:86,15,0	0/0:18,1:19:7.01:0,7,301	0/0:18,0:18:50.50:0,51,571	0/0:19,0:19:49.48:0,49,538	0/1:6,0:6:4.36:4,0,83	0/0:12,0:12:36.04:0,36,383	0/0:15,0:15:39.21:0,39,464	0/0:26,0:26:68.84:0,69,774	0/0:24,0:24:72.19:0,72,845	0/0:26,0:25:41.43:0,41,682	0/1:26,0:24:8.12:8,0,518	1/1:23,2:24:53.40:366,53,0	1/1:12,3:15:32.92:233,33,0	1/1:9,3:11:18.69:138,19,0	0/0:18,0:18:42.05:0,42,462	0/0:16,0:16:48.12:0,48,558	0/0:10,0:7:21.06:0,21,252	0/1:16,0:16:8.81:52,0,9	0/0:19,0:19:56.57:0,57,641	1/1:21,1:19:17.90:128,18,0	0/0:16,0:16:40.96:0,41,384
chr10	105849317	.	T	TGGGAGA	2888.51	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.454;DP=749;FS=1.457;HRun=0;HaplotypeScore=147.4448;InbreedingCoeff=0.9573;MQ=79.07;MQ0=0;MQRankSum=-8.803;QD=43.77;ReadPosRankSum=-1.717;VQSLOD=3.3845;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,114,2369	0/0:22,0:22:48.16:0,48,1030	0/0:29,0:27:14.96:0,15,652	0/0:23,0:21:6.16:0,6,574	0/0:27,0:27:69.24:0,69,1463	1/1:7,17:25:45.15:1457,45,0	1/1:13,9:22:21.07:700,21,0	0/0:24,0:24:51.17:0,51,1075	0/0:27,0:27:69.24:0,69,1480	0/0:36,0:36:78.24:0,78,1550	0/0:23,0:23:48.16:0,48,992	0/0:24,0:24:57.20:0,57,1192	0/0:17,0:17:42.13:0,42,862	0/0:21,0:21:45.14:0,45,927	0/0:26,0:26:63.19:0,63,1262	0/0:23,0:23:54.14:0,54,1099	0/0:45,0:45:99:0,105,2181	0/0:16,0:16:42.14:0,42,898	0/0:26,0:26:48.15:0,48,990	0/0:33,0:33:81.26:0,81,1670	0/0:37,0:37:87.24:0,87,1783	0/0:25,0:25:60.21:0,60,1287	0/0:34,0:34:81.26:0,81,1658	0/0:30,0:30:78.26:0,78,1600	1/1:9,10:19:27.09:874,27,0	0/0:29,0:29:57.18:0,57,1185	0/0:24,0:24:51.18:0,51,1094	0/0:17,0:17:51.17:0,51,1076
chr10	105849969	.	T	TAAA	1479.55	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=10.673;DP=410;FS=18.347;HRun=0;HaplotypeScore=63.7191;InbreedingCoeff=0.3488;MQ=63.39;MQ0=0;MQRankSum=-1.928;QD=11.74;ReadPosRankSum=1.349;VQSLOD=1.5366;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.27:0,78,1422	0/0:13,0:13:32.85:0,33,281	0/1:9,0:3:8.93:9,0,58	0/1:5,0:4:8.96:9,0,40	0/0:26,0:26:69.22:0,69,1243	1/1:1,14:16:22.89:432,23,0	1/1:0,10:11:30.10:542,30,0	0/1:18,0:17:46.40:46,0,282	0/0:16,0:16:48.13:0,48,805	0/0:22,0:22:66.22:0,66,1169	0/0:24,0:24:72.25:0,72,1318	0/0:10,0:10:30.09:0,30,529	0/0:7,0:7:21.06:0,21,361	0/0:8,0:8:21.07:0,21,373	0/0:15,0:15:42.13:0,42,752	0/0:16,0:16:48.14:0,48,822	0/0:18,0:18:45.10:0,45,735	0/0:16,0:16:45.15:0,45,833	0/1:21,0:21:33.69:34,0,328	0/1:15,0:15:91.48:91,0,103	0/0:3,0:3:0.75:0,1,12	0/0:7,0:7:21.07:0,21,386	0/0:8,0:8:24.08:0,24,433	0/0:13,0:13:39.12:0,39,674	1/1:2,14:17:26.42:411,26,0	0/0:24,0:24:72.24:0,72,1296	0/1:14,0:14:35.24:71,0,35	0/0:9,0:9:27.09:0,27,503
chr10	105849970	.	T	TAAA	4269.06	PASS	AB=0.950;AC=20;AF=0.357;AN=56;BaseQRankSum=2.290;DP=425;FS=4.188;HRun=10;HaplotypeScore=58.6603;InbreedingCoeff=0.8708;MQ=62.88;MQ0=0;MQRankSum=-2.562;QD=27.72;ReadPosRankSum=-2.346;VQSLOD=3.0509;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:72.10:0,72,831	1/1:3,0:14:26.88:203,27,0	0/1:8,0:3:4.99:5,0,31	0/1:5,0:4:5.68:6,0,8	0/0:27,0:27:66.12:0,66,790	1/1:16,0:16:24.08:446,24,0	1/1:12,0:12:33.11:617,33,0	1/1:9,11:20:30.91:427,31,0	0/0:16,0:16:36.01:0,36,422	0/0:22,0:23:57.06:0,57,665	0/0:24,0:24:60.12:0,60,718	0/0:9,0:9:27.08:0,27,328	0/0:7,0:7:21.04:0,21,240	0/0:8,0:8:15.01:0,15,171	0/0:16,0:16:41.76:0,42,472	0/0:17,0:17:38.99:0,39,446	0/0:17,0:17:39.09:0,39,460	0/0:16,0:16:45.06:0,45,518	1/1:6,14:22:48.05:729,48,0	1/1:5,11:16:36.12:636,36,0	1/1:1,3:4:8.99:116,9,0	0/0:7,0:7:18.05:0,18,219	0/0:9,0:9:17.99:0,18,219	0/0:13,0:13:30.07:0,30,365	1/1:18,0:18:30.05:485,30,0	0/0:23,0:24:60.06:0,60,711	1/1:3,13:17:33.09:600,33,0	0/0:9,0:9:27.08:0,27,328
chr10	105851123	.	AG	A	1661.91	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.541;DP=528;FS=10.786;HRun=1;HaplotypeScore=62.3944;InbreedingCoeff=0.9255;MQ=54.70;MQ0=5;MQRankSum=2.972;QD=32.59;ReadPosRankSum=-0.558;VQSLOD=1.9835;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1889	0/0:12,0:10:30.10:0,30,478	0/0:9,0:5:12.04:0,12,184	0/0:7,0:5:3.05:0,3,175	0/0:15,0:15:45.15:0,45,717	1/1:0,23:23:63.21:881,63,0	1/1:1,14:13:30.10:419,30,0	0/0:40,0:36:99:0,105,1590	0/0:18,0:18:54.18:0,54,860	0/0:25,0:25:75.26:0,75,1198	0/0:18,0:18:51.17:0,51,814	0/0:17,0:17:51.17:0,51,815	0/0:12,0:12:36.12:0,36,575	0/0:14,0:14:42.14:0,42,671	0/0:23,0:23:69.22:0,69,1076	0/0:11,0:11:33.11:0,33,528	0/0:22,0:22:66.20:0,66,1009	0/0:21,0:21:63.21:0,63,999	0/0:16,0:16:48.15:0,48,725	0/0:17,0:17:48.16:0,48,766	0/0:30,0:29:81.28:0,81,1294	0/0:18,0:18:54.17:0,54,840	0/0:14,0:13:39.13:0,39,623	0/0:32,0:32:90.31:0,90,1431	1/1:0,13:13:36.12:504,36,0	0/0:24,0:24:72.25:0,72,1151	0/0:17,0:17:51.17:0,51,812	0/0:5,0:5:15.05:0,15,240
chr10	105851180	.	TCA	T	497.39	PASS	AB=0.907;AC=18;AF=0.360;AN=50;BaseQRankSum=6.477;DP=515;FS=0.686;HRun=0;HaplotypeScore=84.4957;InbreedingCoeff=-0.0821;MQ=70.22;MQ0=7;MQRankSum=-0.801;QD=1.86;ReadPosRankSum=1.190;VQSLOD=1.7434;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:33.02:0,33,375	0/0:10,0:10:3:0,3,27	./.	./.	0/0:10,0:10:2.99:0,3,24	0/1:20,0:21:8.13:8,0,39	0/1:15,4:20:26.01:126,0,26	./.	0/1:17,3:20:8.45:8,0,240	0/0:24,0:24:21.91:0,22,281	0/1:13,1:14:17.48:17,0,126	0/1:17,1:18:5.43:5,0,317	0/1:14,0:14:0.32:0,0,318	0/1:14,1:15:14.46:14,0,199	0/0:20,0:20:19.40:0,19,247	0/1:18,2:20:25.95:26,0,368	0/1:25,4:29:52.37:52,0,420	0/1:22,0:22:26.28:26,0,243	1/1:9,0:14:8.52:42,9,0	1/1:4,0:11:17:83,17,0	0/0:21,0:20:5.65:0,6,32	0/0:14,0:14:9.01:0,9,113	0/1:13,2:14:37.98:38,0,236	0/0:23,0:23:21.05:0,21,290	0/1:12,3:17:47.70:105,0,48	0/0:17,0:17:12:0,12,152	1/1:9,0:18:19.80:98,20,0	0/0:6,0:6:3:0,3,26
chr10	105852222	.	A	AATAT	2293.78	PASS	AC=18;AF=0.333;AN=54;BaseQRankSum=-4.083;DP=232;FS=11.659;HRun=0;HaplotypeScore=44.8986;InbreedingCoeff=0.7569;MQ=79.66;MQ0=0;MQRankSum=-1.335;QD=32.77;ReadPosRankSum=-1.824;VQSLOD=1.7233;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:33.10:0,33,537	1/1:2,0:2:5.83:34,6,0	1/1:8,0:6:0.88:2,1,0	0/0:11,0:10:5.84:0,6,100	0/0:9,0:9:18.02:0,18,276	1/1:1,4:5:12.04:300,12,0	1/1:1,3:4:9.03:225,9,0	1/1:11,14:27:52.96:1043,53,0	0/0:6,0:6:12:0,12,173	0/0:10,0:10:27.08:0,27,414	0/0:5,0:5:9.02:0,9,130	0/0:7,0:7:20.96:0,21,267	0/0:3,0:3:9.03:0,9,154	0/0:1,0:1:2.97:0,3,20	0/0:7,0:7:18.01:0,18,252	0/0:1,0:1:3.01:0,3,51	0/0:33,0:33:75.22:0,75,1200	0/0:18,0:18:33.09:0,33,526	1/1:6,2:9:12.04:266,12,0	1/1:1,5:6:9.03:214,9,0	1/1:0,0:2:2.80:13,3,0	0/0:4,0:4:12:0,12,173	0/0:2,0:2:2.97:0,3,20	0/0:4,0:4:12.04:0,12,205	1/1:1,5:6:15.05:376,15,0	0/0:6,0:6:17.89:0,18,182	./.	0/0:16,0:16:47.99:0,48,669
chr10	105854167	.	CT	C	5033.32	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.177;DP=594;FS=0.786;HRun=1;HaplotypeScore=59.2270;InbreedingCoeff=0.9943;MQ=85.61;MQ0=0;MQRankSum=-1.774;QD=38.42;ReadPosRankSum=-0.498;VQSLOD=4.9880;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,2275	0/0:6,0:6:15.05:0,15,239	0/0:20,0:20:54.18:0,54,860	0/0:18,0:18:36.66:0,37,744	0/0:14,0:14:42.13:0,42,644	0/0:19,0:19:57.18:0,57,889	0/0:25,0:25:75.25:0,75,1185	1/1:0,28:28:78.24:1055,78,0	0/0:18,0:18:54.18:0,54,863	0/0:20,0:20:60.15:0,60,910	0/0:12,0:12:36.11:0,36,553	0/0:21,0:21:63.21:0,63,1007	0/0:19,0:19:57.19:0,57,911	0/0:22,0:22:63.19:0,63,960	0/0:36,0:36:99:0,108,1678	0/0:17,0:17:51.17:0,51,815	0/0:27,0:27:81.28:0,81,1295	0/0:17,0:17:51.15:0,51,788	1/1:0,15:15:45.15:628,45,0	1/1:0,15:15:39.13:544,39,0	1/1:0,46:46:99:1802,129,0	0/0:17,0:17:51.17:0,51,811	0/0:12,0:12:36.12:0,36,575	0/0:23,0:23:69.22:0,69,1079	0/0:17,0:17:42.14:0,42,671	0/0:28,0:28:84.25:0,84,1259	1/1:0,27:27:72.24:1005,72,0	0/0:6,0:6:18.06:0,18,288
chr10	105854533	.	GCACA	G	2400.06	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=2.896;DP=567;FS=7.799;HRun=0;HaplotypeScore=133.2069;InbreedingCoeff=0.9053;MQ=64.00;MQ0=10;MQRankSum=-2.046;QD=12.97;ReadPosRankSum=-0.662;VQSLOD=2.8335;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:65.66:0,66,938	1/1:5,3:8:15.05:221,15,0	0/0:22,0:15:26.40:0,26,392	0/0:31,0:18:27.04:0,27,374	0/0:28,0:28:63.19:0,63,907	1/1:9,14:22:32.56:451,33,0	1/1:19,4:24:23.59:354,24,0	1/1:7,13:20:31.59:551,32,0	0/1:13,0:13:1.26:1,0,359	0/0:23,0:23:50.95:0,51,1098	0/0:19,0:19:51.10:0,51,1019	0/0:14,0:14:21:0,21,265	0/0:14,0:15:32.59:0,33,452	0/0:20,0:19:13.58:0,14,459	0/0:19,0:18:30.03:0,30,426	0/0:16,0:17:41.88:0,42,839	0/0:39,0:39:47.40:0,47,1011	0/0:15,0:15:33.07:0,33,413	1/1:4,4:9:15.02:213,15,0	1/1:3,17:20:9.02:141,9,0	1/1:35,5:40:20.47:245,20,0	0/0:22,0:22:40.61:0,41,654	0/0:12,0:12:25.78:0,26,332	0/0:21,0:21:39.09:0,39,560	1/1:11,10:21:29.76:380,30,0	0/0:18,0:19:41.82:0,42,655	1/1:4,3:6:3.01:48,3,0	0/0:8,0:8:21.04:0,21,364
chr10	105854554	.	TAC	T	4085.15	PASS	AB=0.770;AC=41;AF=0.732;AN=56;BaseQRankSum=6.360;DP=621;FS=6.118;HRun=0;HaplotypeScore=109.4026;InbreedingCoeff=0.4945;MQ=53.42;MQ0=17;MQRankSum=0.349;QD=7.95;ReadPosRankSum=4.138;VQSLOD=2.5943;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,28:42:33.10:389,33,0	1/1:2,2:6:8.80:72,9,0	0/0:41,0:12:8.31:0,8,52	0/1:47,1:13:15.62:16,0,77	1/1:9,16:25:32.51:387,33,0	1/1:11,14:24:31.29:336,31,0	1/1:12,12:25:17.87:178,18,0	1/1:19,0:19:14.13:55,14,0	1/1:4,9:14:20.63:202,21,0	0/0:25,0:25:43.05:0,43,799	0/0:19,0:19:31.45:0,31,520	1/1:5,9:14:14.58:152,15,0	1/1:4,12:16:20.77:247,21,0	0/1:7,13:19:18.38:233,0,18	1/1:7,10:16:9.03:106,9,0	0/0:16,0:16:29.93:0,30,435	1/1:8,30:37:29.10:510,29,0	1/1:8,7:15:9.03:106,9,0	0/1:4,0:14:1.73:52,0,2	1/1:8,0:17:8.38:40,8,0	1/1:26,0:48:3.02:11,3,0	1/1:7,16:24:20.73:226,21,0	1/1:4,7:13:24.37:259,24,0	1/1:7,13:20:23.66:257,24,0	1/1:12,9:22:20.73:209,21,0	0/1:19,2:20:25.55:26,0,467	0/1:7,0:9:11.43:18,0,11	0/0:6,0:6:9.01:0,9,118
chr10	105854673	.	TA	T	828.28	PASS	AB=0.748;AC=11;AF=0.196;AN=56;BaseQRankSum=3.621;DP=682;FS=4.377;HRun=15;HaplotypeScore=88.4622;InbreedingCoeff=0.2426;MQ=68.68;MQ0=14;MQRankSum=1.480;QD=3.76;ReadPosRankSum=1.371;VQSLOD=1.2571;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,1:53:71:0,71,791	0/1:4,4:9:0.13:82,0,0	0/1:61,0:15:8.89:9,0,58	0/0:42,0:23:1.67:0,2,54	0/0:22,2:26:14.74:0,15,301	0/0:8,0:16:27.66:0,28,194	0/0:10,1:28:21.17:0,21,202	1/1:13,16:29:22.77:234,23,0	0/0:13,0:13:29.11:0,29,219	0/0:21,1:23:12.88:0,13,333	0/0:24,3:27:27.03:0,27,399	0/0:19,1:19:31.54:0,32,369	0/0:13,0:13:26.96:0,27,230	0/1:10,2:12:5.56:6,0,196	0/0:22,3:27:10.62:0,11,416	0/0:18,0:19:24.73:0,25,329	0/0:31,2:36:28.56:0,29,513	0/1:13,3:15:7.12:7,0,172	0/1:10,11:21:81.27:138,0,81	0/1:12,16:29:35.97:211,0,36	1/1:2,5:9:12.94:69,13,0	0/0:17,0:18:3.25:0,3,238	0/0:18,2:22:15.02:0,15,336	0/0:19,1:20:27.19:0,27,339	0/0:10,0:22:32.15:0,32,216	0/0:14,2:17:7.46:0,7,164	0/1:10,21:31:27.39:222,0,27	0/0:15,0:17:26.73:0,27,224
chr10	105854826	.	AC	A	236.54	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.686;DP=552;FS=4.711;HRun=2;HaplotypeScore=58.8349;InbreedingCoeff=0.9960;MQ=78.56;MQ0=1;MQRankSum=-1.126;QD=26.28;ReadPosRankSum=0.004;VQSLOD=3.0854;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.32:0,93,1392	1/1:0,9:9:27.05:331,27,0	0/0:13,0:13:36.11:0,36,502	0/0:18,0:17:39.87:0,40,596	0/0:25,0:25:72.24:0,72,1073	0/0:15,0:15:36.10:0,36,518	0/0:16,0:16:48.16:0,48,712	0/0:31,0:31:87.26:0,87,1239	0/0:14,0:14:39.10:0,39,561	0/0:16,0:16:42.14:0,42,609	0/0:12,0:12:33.11:0,33,487	0/0:21,0:21:57.18:0,57,826	0/0:21,0:21:60.20:0,60,891	0/0:14,0:14:42.14:0,42,623	0/0:24,0:23:69.22:0,69,1013	0/0:19,0:19:57.18:0,57,829	0/0:36,0:36:99:0,105,1562	0/0:24,0:24:72.24:0,72,1063	0/0:27,0:27:81.18:0,81,1134	0/0:23,0:23:63.20:0,63,916	0/0:19,0:19:48.16:0,48,707	0/0:17,0:17:48.16:0,48,719	0/0:13,0:13:36.12:0,36,539	0/0:27,0:27:81.27:0,81,1206	0/0:14,0:14:36.12:0,36,535	0/0:16,0:16:48.16:0,48,719	0/0:26,0:26:59.63:0,60,876	0/0:8,0:8:24.08:0,24,359
chr10	105854865	.	C	CT	3092.09	PASS	AB=0.812;AC=17;AF=0.304;AN=56;BaseQRankSum=-7.529;DP=622;FS=3.307;HRun=11;HaplotypeScore=70.9197;InbreedingCoeff=0.6034;MQ=70.29;MQ0=1;MQRankSum=0.761;QD=13.21;ReadPosRankSum=-0.949;VQSLOD=3.6066;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:33:49.83:0,50,554	0/1:10,0:10:0:0,0,0	0/0:19,0:13:6.25:0,6,47	0/1:17,1:16:30.27:58,0,30	0/0:25,0:25:59.64:0,60,455	1/1:1,10:13:26.05:282,26,0	1/1:4,9:13:3.83:220,4,0	1/1:13,20:34:13.42:463,13,0	0/0:23,0:23:62.72:0,63,485	0/0:17,0:17:38.83:0,39,301	0/1:14,2:16:25.04:25,0,194	0/0:31,0:31:74.68:0,75,580	0/0:22,0:22:43.80:0,44,326	0/0:13,1:17:15.48:0,15,283	0/0:35,1:36:67.17:0,67,689	0/0:20,0:21:52.80:0,53,401	0/0:30,0:32:64.67:0,65,487	0/0:16,0:16:29.85:0,30,232	0/1:12,17:31:5.95:429,0,6	0/1:8,18:26:65.65:409,0,66	1/1:2,16:18:36.07:365,36,0	0/0:19,1:20:26.33:0,26,385	0/0:16,0:16:29.78:0,30,226	0/0:24,0:24:56.73:0,57,436	1/1:3,15:18:42.07:421,42,0	0/0:27,1:28:59.67:0,60,460	1/1:9,27:37:28.61:605,29,0	0/0:7,0:7:17.93:0,18,139
chr10	105855509	.	A	AGTTT	4681.88	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.892;DP=736;FS=4.500;HRun=0;HaplotypeScore=124.2496;InbreedingCoeff=0.9561;MQ=72.72;MQ0=2;MQRankSum=-0.805;QD=28.90;ReadPosRankSum=-1.084;VQSLOD=4.6185;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:44:72.20:0,72,1076	0/0:3,0:9:15.02:0,15,140	0/0:29,0:27:6.02:0,6,93	0/0:25,0:23:18.06:0,18,286	0/0:21,0:21:36.11:0,36,550	0/0:5,0:19:39.04:0,39,363	0/0:8,0:28:54.06:0,54,503	1/1:35,3:39:21.03:329,21,0	0/0:26,0:26:42.14:0,42,669	0/0:27,0:27:60.19:0,60,916	0/0:15,0:15:30.10:0,30,474	0/0:26,0:26:42.10:0,42,617	0/0:21,0:21:42.14:0,42,669	0/0:17,0:17:33.11:0,33,525	0/0:34,0:34:66.22:0,66,1026	0/0:37,0:37:90.28:0,90,1388	0/0:36,0:36:75.20:0,75,1139	0/0:22,0:22:45.14:0,45,689	1/1:16,10:26:30.10:685,30,0	1/1:7,14:21:42.14:997,42,0	1/1:24,17:41:42.14:1005,42,0	0/0:22,0:22:27.09:0,27,428	0/0:27,0:27:45.13:0,45,670	0/0:35,0:34:78.18:0,78,1183	0/0:4,0:19:39.04:0,39,363	0/0:27,0:27:51.16:0,51,771	1/1:7,25:33:72.18:1667,72,0	0/0:7,0:7:9.02:0,9,123
chr10	105856083	.	CTTTTTTTTTTTT	C	1546.13	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.634;DP=435;FS=2.019;HRun=19;HaplotypeScore=127.2573;InbreedingCoeff=0.8085;MQ=55.06;MQ0=16;MQRankSum=-3.764;QD=55.22;ReadPosRankSum=4.384;VQSLOD=0.4952;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:48.16:0,48,1859	0/0:4,0:4:0:0,0,0	0/0:42,0:14:9.33:0,9,545	0/0:26,0:7:12.04:0,12,273	0/0:19,0:20:45.15:0,45,1891	1/1:2,11:12:30.02:931,30,0	1/1:3,3:6:2.89:93,3,0	0/0:36,0:35:63.68:0,64,2421	0/0:15,0:15:36.12:0,36,1590	0/0:13,0:12:33.11:0,33,1323	0/0:15,0:17:42.13:0,42,1743	0/0:7,0:7:12.04:0,12,563	0/0:6,0:8:24.08:0,24,1107	0/0:10,0:10:18.06:0,18,770	0/0:14,0:16:39.13:0,39,1772	0/0:14,0:14:36.58:0,37,1654	0/0:13,0:13:30.08:0,30,1303	0/0:8,0:9:12.04:0,12,598	0/0:21,0:22:54.19:0,54,2339	0/0:12,0:12:36.12:0,36,1556	0/0:10,0:9:24.07:0,24,961	0/0:4,0:3:6.02:0,6,163	0/0:16,0:16:36.59:0,37,1537	0/0:11,0:11:24.08:0,24,1060	1/1:1,8:9:21:652,21,0	0/0:15,0:15:42.14:0,42,1713	0/0:21,0:21:57.20:0,57,2750	0/0:12,0:11:30.10:0,30,1532
chr10	105856757	.	CT	C	691.95	PASS	AB=0.848;AC=10;AF=0.179;AN=56;BaseQRankSum=1.484;DP=454;FS=2.574;HRun=13;HaplotypeScore=58.7627;InbreedingCoeff=0.4805;MQ=62.89;MQ0=4;MQRankSum=-0.036;QD=5.72;ReadPosRankSum=-0.564;VQSLOD=1.8888;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:26.11:0,26,395	0/0:4,0:4:3.91:0,4,22	0/0:21,0:8:3.29:0,3,26	0/1:16,0:8:6.11:6,0,50	0/0:26,1:28:15.14:0,15,295	0/0:10,2:13:1.97:0,2,167	0/0:7,0:8:20.86:0,21,185	1/1:19,11:30:19.68:265,20,0	0/0:12,0:12:29.98:0,30,274	0/0:31,0:30:31.93:0,32,443	0/0:23,0:23:27.70:0,28,385	0/0:12,0:12:21.03:0,21,204	0/0:9,0:9:15.01:0,15,140	0/0:11,1:12:5.08:0,5,200	0/0:9,0:9:16.68:0,17,136	0/1:4,1:5:12.89:13,0,49	0/0:26,0:26:32.19:0,32,474	0/0:20,1:21:23.15:0,23,380	1/1:9,10:19:28.19:200,28,0	0/1:8,9:17:0.32:152,0,0	0/0:4,0:4:0:0,0,0	0/0:12,0:12:26.95:0,27,238	0/0:12,0:11:17.86:0,18,159	0/0:11,0:10:27.93:0,28,264	0/0:25,1:26:40.96:0,41,528	0/0:18,0:18:5.01:0,5,301	1/1:6,14:20:14.69:200,15,0	0/1:10,1:10:6.88:7,0,97
chr10	105858197	.	T	TA	2114.01	PASS	AB=0.967;AC=19;AF=0.339;AN=56;BaseQRankSum=-7.569;DP=494;FS=0.000;HRun=12;HaplotypeScore=59.4579;InbreedingCoeff=0.6706;MQ=71.98;MQ0=3;MQRankSum=-0.739;QD=11.74;ReadPosRankSum=-0.264;VQSLOD=3.0303;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,2:27:4.26:0,4,356	0/1:9,0:9:8.56:9,0,11	0/0:24,0:15:20.76:0,21,145	0/0:30,0:17:6.26:0,6,82	0/0:21,0:21:50.67:0,51,372	1/1:4,14:18:10.44:243,10,0	1/1:2,16:19:23.04:371,23,0	1/1:11,16:27:28.89:399,29,0	0/0:12,0:12:29.82:0,30,219	0/0:13,0:13:14.85:0,15,105	0/0:11,0:11:26.78:0,27,195	0/0:11,0:11:23.85:0,24,175	0/0:18,1:18:9.38:0,9,233	0/0:14,1:15:3.74:0,4,189	0/0:11,0:13:24.92:0,25,165	0/0:19,0:20:46.76:0,47,334	0/0:30,0:30:65.52:0,66,479	0/0:22,0:22:50.47:0,50,360	1/1:8,10:17:21.02:198,21,0	1/1:4,7:12:20.87:189,21,0	1/1:7,10:16:2.13:182,2,0	0/0:6,0:6:14.91:0,15,109	0/1:12,0:12:14.28:14,0,73	0/0:22,0:24:28.81:0,29,355	1/1:2,8:10:24.04:234,24,0	0/0:16,0:16:40.99:0,41,281	1/1:6,21:28:32.02:459,32,0	0/1:8,1:9:12.47:12,0,76
chr10	105858207	.	AAAG	A	253.68	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=4.882;DP=502;FS=3.128;HRun=0;HaplotypeScore=80.9935;InbreedingCoeff=0.4281;MQ=76.01;MQ0=5;MQRankSum=-1.691;QD=5.07;ReadPosRankSum=-3.561;VQSLOD=1.0712;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.06:0,69,1062	1/1:2,6:8:24.07:326,24,0	0/0:38,0:23:29.61:0,30,287	0/0:35,0:17:13.76:0,14,157	0/0:20,0:20:60.09:0,60,791	0/0:18,0:18:17.87:0,18,398	0/0:19,0:19:17.81:0,18,449	0/1:28,0:27:21.68:22,0,553	0/0:13,0:13:39.02:0,39,586	0/0:13,0:13:33:0,33,460	0/0:14,0:14:39.06:0,39,643	0/0:10,0:10:24.04:0,24,408	0/0:18,0:17:44.99:0,45,682	0/0:15,0:15:29.76:0,30,564	0/0:13,0:13:32.75:0,33,464	0/0:18,0:18:47.30:0,47,717	0/0:29,0:29:75.18:0,75,1282	0/0:21,0:21:60.09:0,60,936	0/1:14,0:12:20:20,0,172	0/0:15,0:15:29.68:0,30,450	0/0:15,0:14:17.87:0,18,301	0/0:5,0:5:15.04:0,15,262	0/0:8,0:8:8.83:0,9,223	0/0:23,0:23:55.75:0,56,1060	0/0:13,0:13:26.84:0,27,352	0/0:15,0:15:45.10:0,45,720	0/0:27,0:27:44.76:0,45,675	0/0:10,0:10:26.82:0,27,330
chr10	105859831	.	CG	C	1003.87	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.670;DP=237;FS=13.449;HRun=7;HaplotypeScore=28.4426;InbreedingCoeff=0.7096;MQ=79.55;MQ0=0;MQRankSum=-0.350;QD=18.59;ReadPosRankSum=3.155;VQSLOD=1.7775;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,1:18:11.54:0,12,444	0/0:1,0:1:3.01:0,3,38	0/0:8,0:7:9.03:0,9,113	0/0:11,0:11:23.59:0,24,212	0/0:5,0:4:12.04:0,12,151	1/1:3,10:13:32.94:312,33,0	1/1:5,27:32:75.16:764,75,0	0/0:14,0:14:30.04:0,30,347	0/0:9,0:9:24.08:0,24,302	0/0:6,0:6:15.05:0,15,189	0/0:5,0:5:12.03:0,12,138	0/0:8,0:8:21.06:0,21,252	0/0:5,0:5:9.02:0,9,97	0/0:9,0:9:24.06:0,24,288	0/0:4,0:4:9.02:0,9,103	0/0:10,0:10:30.07:0,30,349	0/0:10,0:10:15.04:0,15,171	0/0:6,0:6:18.03:0,18,201	0/0:6,0:6:18.01:0,18,208	0/0:5,0:5:12.03:0,12,137	0/0:13,0:13:33.08:0,33,387	0/0:8,0:8:15.04:0,15,172	0/0:4,0:4:9.03:0,9,113	0/0:2,0:2:6.01:0,6,62	1/1:1,8:9:6.01:61,6,0	0/0:10,0:10:24.07:0,24,289	0/0:3,0:3:9:0,9,96	0/0:3,0:3:6.02:0,6,75
chr10	105860145	.	T	TTGG	593.74	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.398;DP=504;FS=8.835;HRun=0;HaplotypeScore=76.8174;InbreedingCoeff=0.7977;MQ=70.47;MQ0=2;MQRankSum=-2.704;QD=11.87;ReadPosRankSum=-4.403;VQSLOD=0.8492;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1825	1/1:1,0:1:3:25,3,0	0/0:16,0:13:6.14:0,6,206	0/0:20,0:12:22.43:0,22,224	0/0:10,0:10:24:0,24,323	1/1:7,0:12:17.99:181,18,0	1/1:2,23:30:23.83:388,24,0	0/0:14,0:14:36.10:0,36,558	0/0:19,0:19:51.57:0,52,783	0/0:14,0:14:42.12:0,42,603	0/0:3,0:3:8.86:0,9,117	0/0:31,0:31:87.16:0,87,1359	0/0:17,0:17:48.09:0,48,683	0/0:26,0:26:74.65:0,75,1152	0/0:33,0:33:99:0,99,1574	0/0:19,0:19:57.17:0,57,866	0/0:40,0:40:99:0,120,1852	0/0:29,0:29:77.89:0,78,1213	0/0:17,0:17:51.03:0,51,669	0/0:4,0:4:12.04:0,12,206	0/0:35,0:35:99:0,105,1629	0/0:1,0:1:3.01:0,3,52	0/0:4,0:4:12.04:0,12,172	0/0:28,0:28:84.28:0,84,1409	1/1:5,0:5:14.99:146,15,0	0/0:18,0:18:51.13:0,51,805	0/0:15,0:15:45.10:0,45,689	0/0:1,0:1:3.01:0,3,52
chr10	105860396	.	CGGGGGGGGG	C	1811.49	PASS	AB=1.000;AC=7;AF=0.167;AN=42;BaseQRankSum=3.515;DP=161;FS=0.000;HRun=15;HaplotypeScore=52.4469;InbreedingCoeff=0.5575;MQ=106.90;MQ0=2;MQRankSum=-5.244;QD=40.26;ReadPosRankSum=6.730;VQSLOD=0.4161;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:6.01:0,6,105	./.	0/0:28,0:15:35.87:0,36,965	0/0:29,0:18:33.89:0,34,831	./.	1/1:1,13:14:30.10:780,30,0	1/1:6,15:21:27.04:701,27,0	0/0:4,0:4:6.02:0,6,168	0/0:4,0:4:9.03:0,9,296	0/1:2,0:2:0.02:0,0,0	./.	0/0:2,0:2:3.01:0,3,90	./.	./.	0/0:2,0:2:3:0,3,25	0/0:4,0:4:6.02:0,6,176	0/0:3,0:3:3.01:0,3,84	0/0:2,0:2:1.25:0,1,3	0/0:5,0:5:9.03:0,9,280	0/0:2,0:2:0:0,0,0	0/0:10,0:11:15.04:0,15,364	./.	0/0:1,0:1:3.01:0,3,96	0/0:5,0:5:6.02:0,6,225	1/1:0,8:8:18.06:455,18,0	0/0:5,0:5:10.27:0,10,182	0/0:3,0:3:6.02:0,6,193	./.
chr10	105861062	.	TC	T	1277.06	PASS	AB=0.953;AC=16;AF=0.286;AN=56;BaseQRankSum=1.750;DP=542;FS=10.841;HRun=4;HaplotypeScore=70.6742;InbreedingCoeff=0.7154;MQ=82.65;MQ0=2;MQRankSum=-0.590;QD=9.25;ReadPosRankSum=-1.005;VQSLOD=-0.0334;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:53:99:0,144,1578	1/1:3,1:4:6:58,6,0	0/0:47,0:29:33.01:0,33,317	0/0:38,0:25:7.50:0,7,253	0/0:21,0:21:59.96:0,60,612	1/1:5,13:18:33.10:391,33,0	1/1:4,13:17:27.02:302,27,0	0/1:26,3:29:9.05:207,0,9	0/0:12,0:12:34.83:0,35,363	0/0:16,0:16:47.31:0,47,512	0/0:7,0:7:17.95:0,18,177	0/0:19,0:19:52.17:0,52,528	0/0:12,0:12:32.84:0,33,337	0/0:14,0:14:39.04:0,39,406	0/0:19,0:19:48.02:0,48,529	0/0:20,0:20:54.12:0,54,615	0/0:24,0:24:65.96:0,66,761	0/0:22,0:22:51.09:0,51,583	1/1:13,0:12:3.88:55,4,0	1/1:17,1:18:5.78:145,6,0	0/1:24,0:24:7.11:95,0,7	0/0:9,0:9:26.53:0,27,247	0/0:16,0:16:41.97:0,42,407	0/0:28,0:28:73.86:0,74,824	1/1:1,5:6:14.98:161,15,0	0/0:18,0:18:45.07:0,45,484	1/1:9,0:9:0.05:41,0,0	0/0:6,0:6:15.05:0,15,184
chr10	105861162	.	CAAA	C	1407.18	PASS	AB=0.647;AC=15;AF=0.268;AN=56;BaseQRankSum=3.706;DP=460;FS=2.814;HRun=14;HaplotypeScore=62.7250;InbreedingCoeff=0.8090;MQ=54.27;MQ0=17;MQRankSum=-5.936;QD=14.21;ReadPosRankSum=2.984;VQSLOD=1.7398;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:56.79:0,57,927	1/1:2,7:9:15.04:174,15,0	0/0:42,0:7:4.25:0,4,30	0/0:38,0:12:10.99:0,11,62	0/0:12,0:16:37.30:0,37,554	0/0:6,0:13:8.38:0,8,44	0/1:5,2:11:22.27:22,0,43	1/1:19,6:23:48.49:506,48,0	0/0:11,0:11:20.66:0,21,322	0/0:14,0:14:19.30:0,19,278	0/0:13,0:12:24.06:0,24,384	0/0:14,0:21:21.03:0,21,310	0/0:5,0:5:11.92:0,12,184	0/0:12,0:11:21.07:0,21,320	0/0:13,0:12:27.09:0,27,469	0/0:13,0:12:29.89:0,30,467	0/0:22,0:22:42.14:0,42,697	0/0:23,0:24:36.97:0,37,587	1/1:12,5:16:32.95:339,33,0	1/1:4,5:8:14.94:150,15,0	1/1:2,1:3:3:33,3,0	0/0:15,0:15:24.07:0,24,401	0/0:13,0:14:28.95:0,29,326	0/0:16,0:17:30.08:0,30,481	1/1:1,8:10:12.06:170,12,0	0/0:16,0:16:35.44:0,35,526	1/1:7,4:12:12.13:202,12,0	0/0:10,0:8:18.06:0,18,324
chr10	105861177	.	GAA	G	1118.56	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.858;DP=505;FS=5.929;HRun=14;HaplotypeScore=61.5663;InbreedingCoeff=0.8921;MQ=47.84;MQ0=25;MQRankSum=-2.554;QD=9.17;ReadPosRankSum=0.502;VQSLOD=1.4826;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:62.09:0,62,773	0/0:9,0:9:20.02:0,20,163	1/1:41,0:2:1.24:3,1,0	0/0:54,1:9:5.54:0,6,30	0/0:20,0:20:53.07:0,53,622	0/0:13,0:13:26.92:0,27,305	0/0:11,0:11:25.55:0,26,228	1/1:8,18:22:42.04:410,42,0	0/0:11,0:12:32.97:0,33,416	0/0:15,0:12:32.83:0,33,421	0/0:10,0:8:21.05:0,21,277	0/0:19,0:18:25.89:0,26,331	0/0:6,0:6:16.46:0,16,174	0/0:14,0:13:27.03:0,27,322	0/0:15,0:14:35.44:0,35,416	0/0:19,0:18:34.89:0,35,406	0/0:19,0:20:46.38:0,46,528	0/0:28,0:28:58.65:0,59,765	1/1:9,12:19:41.69:394,42,0	1/1:3,10:11:17.94:168,18,0	1/1:1,3:4:3:30,3,0	0/0:12,0:12:24.08:0,24,341	0/0:14,0:13:26.53:0,27,296	0/0:14,0:15:26.98:0,27,356	0/0:18,0:17:35.20:0,35,352	0/0:24,0:24:58.76:0,59,720	1/1:1,15:16:29.92:281,30,0	0/0:10,0:9:26.92:0,27,370
chr10	105864096	.	G	GA	1335.33	PASS	AB=0.813;AC=6;AF=0.107;AN=56;BaseQRankSum=-7.853;DP=544;FS=7.922;HRun=9;HaplotypeScore=53.0452;InbreedingCoeff=0.6523;MQ=72.94;MQ0=0;MQRankSum=-0.038;QD=19.64;ReadPosRankSum=1.177;VQSLOD=3.9841;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:29.99:0,30,260	0/0:13,0:13:38.99:0,39,339	0/0:14,0:14:9.93:0,10,188	0/1:7,0:7:3.92:4,0,86	0/0:24,0:24:59.97:0,60,521	1/1:3,25:28:66.18:730,66,0	0/1:6,9:15:22.03:235,0,22	0/0:28,0:28:65.97:0,66,573	0/0:35,0:36:85.97:0,86,725	0/0:24,0:24:53.97:0,54,469	0/0:16,0:16:44.99:0,45,391	0/0:35,0:35:86.96:0,87,755	0/0:17,0:17:35.97:0,36,310	0/0:18,0:18:38.96:0,39,335	0/0:19,0:19:50.98:0,51,443	0/0:22,0:22:57.46:0,57,496	0/0:15,0:15:19.16:0,19,293	0/0:9,0:11:25.06:0,25,194	0/0:18,0:18:50.99:0,51,443	0/0:17,0:17:47.99:0,48,417	0/0:13,0:13:35.99:0,36,312	0/0:16,0:16:41.90:0,42,350	0/0:17,0:17:44.99:0,45,391	0/0:19,0:19:47.94:0,48,405	1/1:2,16:18:45.12:498,45,0	0/0:24,0:24:65.99:0,66,573	0/0:34,0:35:95.01:0,95,813	0/0:11,0:11:32.99:0,33,287
chr10	105864198	.	A	AT	2141.45	PASS	AB=0.700;AC=17;AF=0.304;AN=56;BaseQRankSum=-9.537;DP=422;FS=3.313;HRun=13;HaplotypeScore=51.9114;InbreedingCoeff=0.6851;MQ=70.31;MQ0=0;MQRankSum=1.233;QD=13.55;ReadPosRankSum=-2.283;VQSLOD=3.2787;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:11:19.77:0,20,127	0/1:3,4:7:5.57:96,0,6	0/0:10,0:8:0.67:0,1,15	0/0:6,0:6:3.41:0,3,21	0/0:27,0:27:61.27:0,61,410	0/1:3,13:15:3.11:218,0,3	1/1:1,3:4:9.01:84,9,0	1/1:8,18:27:49.11:427,49,0	0/0:12,0:12:35.71:0,36,247	0/0:24,0:24:31.66:0,32,361	0/0:19,0:19:11.69:0,12,184	0/1:17,2:21:7.01:7,0,230	0/0:10,0:10:20.78:0,21,144	0/0:7,0:8:13.83:0,14,86	0/0:10,0:10:17.81:0,18,122	0/0:15,0:15:38.65:0,39,265	0/0:11,0:13:25.08:0,25,157	0/0:13,0:13:28.49:0,28,184	1/1:4,14:19:41.84:363,42,0	1/1:1,15:17:41.72:357,42,0	1/1:2,8:10:24.03:223,24,0	0/0:11,0:12:34.74:0,35,229	0/0:22,0:22:53.52:0,54,368	0/0:10,1:11:1.93:0,2,157	1/1:1,5:7:11.68:98,12,0	0/0:25,0:25:53.38:0,53,368	1/1:7,22:30:8.50:459,8,0	0/0:14,0:14:32.62:0,33,226
chr10	105865187	.	TTG	T	350.25	PASS	AB=0.982;AC=11;AF=0.196;AN=56;BaseQRankSum=4.905;DP=344;FS=4.638;HRun=0;HaplotypeScore=76.4258;InbreedingCoeff=0.5327;MQ=61.18;MQ0=9;MQRankSum=-4.354;QD=5.15;ReadPosRankSum=-2.390;VQSLOD=1.6799;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:80.60:0,81,1060	1/1:2,0:2:4.05:13,4,0	0/1:17,1:9:18.50:19,0,84	0/0:13,0:5:11.15:0,11,69	0/0:8,0:7:19.92:0,20,205	1/1:5,2:7:17.91:179,18,0	1/1:4,2:6:17.57:168,18,0	0/1:17,0:17:7.29:7,0,215	0/0:10,0:10:27.07:0,27,385	0/0:14,0:14:35.64:0,36,480	0/0:1,0:1:3.01:0,3,47	0/0:18,0:18:18.85:0,19,487	0/0:9,0:9:21.02:0,21,242	0/0:20,0:20:45.26:0,45,624	0/0:7,0:7:15.03:0,15,208	0/0:11,0:11:32.12:0,32,420	0/0:22,0:20:50.69:0,51,617	0/0:21,0:19:47.90:0,48,630	0/1:14,0:14:24.32:24,0,144	0/0:3,0:2:0.47:0,0,1	0/0:8,0:8:2.06:0,2,134	0/0:4,0:4:12.04:0,12,179	0/0:9,0:9:17.65:0,18,228	0/0:27,0:27:74.74:0,75,998	1/1:3,1:4:11.87:96,12,0	0/0:16,0:15:41.55:0,42,547	0/0:10,0:9:24.05:0,24,265	0/0:11,0:11:32.70:0,33,474
chr10	105865194	.	TG	T	325.25	PASS	AB=0.889;AC=9;AF=0.161;AN=56;BaseQRankSum=6.133;DP=353;FS=1.425;HRun=1;HaplotypeScore=75.8655;InbreedingCoeff=0.5085;MQ=55.30;MQ0=10;MQRankSum=-6.185;QD=5.71;ReadPosRankSum=-2.465;VQSLOD=-0.3591;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:79.11:0,79,1006	0/0:3,0:3:1.92:0,2,7	0/0:14,1:5:5.66:0,6,36	0/0:13,0:5:4.92:0,5,22	0/0:8,0:6:18.01:0,18,186	1/1:6,3:9:24.86:151,25,0	1/1:7,2:9:26.36:171,26,0	0/0:20,0:19:22.72:0,23,220	0/0:12,0:12:20.41:0,20,375	0/0:14,0:14:38.85:0,39,494	0/0:1,0:1:3.01:0,3,42	0/0:15,0:15:29.99:0,30,415	0/0:9,0:9:21.07:0,21,275	0/0:19,0:19:41.28:0,41,567	0/0:7,0:7:14.37:0,14,150	0/0:9,0:9:25.94:0,26,285	0/0:26,0:24:54.08:0,54,631	0/0:19,0:17:40.92:0,41,496	0/1:17,0:17:45.59:46,0,110	0/1:2,2:3:6.83:30,0,7	0/1:10,0:10:0.38:0,0,70	0/0:3,0:3:9.03:0,9,126	0/0:9,0:9:20.04:0,20,177	0/0:25,0:25:68.48:0,68,791	1/1:7,1:8:8.11:72,8,0	0/0:16,0:15:45.09:0,45,537	0/0:9,1:9:2.42:0,2,100	0/0:11,0:11:32.46:0,32,374
chr10	105865195	.	GTTTTTGTTTTTT	G	970.26	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=4.428;DP=354;FS=10.734;HRun=0;HaplotypeScore=140.6163;InbreedingCoeff=0.2840;MQ=55.23;MQ0=10;MQRankSum=-5.045;QD=10.78;ReadPosRankSum=-4.674;VQSLOD=-0.4255;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:75.54:0,76,2706	0/1:3,0:3:5.12:5,0,62	0/0:16,0:5:4.72:0,5,80	0/0:13,0:5:2.88:0,3,35	0/0:8,0:6:18.06:0,18,451	1/1:6,1:9:27.08:418,27,0	1/1:7,0:9:7.83:230,8,0	0/1:20,0:19:24.46:24,0,141	0/0:13,0:13:33.11:0,33,849	0/0:14,0:14:36.12:0,36,1135	0/0:1,0:1:3.01:0,3,68	0/0:15,0:15:42.14:0,42,1397	0/0:10,0:10:21.07:0,21,716	0/0:19,0:19:51.16:0,51,1561	0/0:7,0:7:15.05:0,15,564	0/0:9,0:9:27.09:0,27,1133	0/0:26,0:24:51.17:0,51,1363	0/0:18,0:17:42.10:0,42,1240	0/1:18,0:18:61.42:61,0,169	0/1:5,0:4:13.76:14,0,27	0/1:9,0:10:23.92:24,0,31	0/0:3,0:3:9.03:0,9,551	0/0:9,0:9:8.80:0,9,464	0/0:24,0:24:63.21:0,63,2428	1/1:5,3:8:14.72:338,15,0	0/0:16,0:15:42.13:0,42,1231	0/1:8,0:7:14.93:15,0,17	0/0:11,0:11:33.11:0,33,1163
chr10	105865198	.	TTTG	T	1489.73	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=3.041;DP=359;FS=1.749;HRun=0;HaplotypeScore=83.3048;InbreedingCoeff=0.8077;MQ=53.47;MQ0=10;MQRankSum=-7.135;QD=13.92;ReadPosRankSum=-5.676;VQSLOD=2.1397;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:80.80:0,81,641	1/1:3,0:3:7.73:51,8,0	0/1:14,0:4:3.94:4,0,15	0/0:12,0:4:3.88:0,4,26	0/0:8,0:6:17.75:0,18,141	1/1:11,0:11:26.96:164,27,0	1/1:9,0:9:21.68:127,22,0	1/1:18,3:20:38.98:464,39,0	0/0:13,0:13:32.65:0,33,236	0/0:15,0:15:35.70:0,36,304	0/0:1,0:1:3.01:0,3,38	0/0:15,0:15:41.45:0,41,404	0/0:10,0:10:20.17:0,20,168	0/0:19,0:19:44.35:0,44,408	0/0:7,0:7:14.93:0,15,112	0/0:9,0:9:26.94:0,27,249	0/0:26,0:24:50.05:0,50,363	0/0:18,0:17:38.85:0,39,301	1/1:15,3:18:32.23:439,32,0	1/1:5,0:4:5.86:39,6,0	1/1:9,1:10:14.98:158,15,0	0/0:4,0:4:12.04:0,12,212	0/0:9,0:9:0.64:0,1,74	0/0:24,0:24:62.68:0,63,492	1/1:8,0:8:10.73:88,11,0	0/0:17,0:16:41.23:0,41,298	1/1:6,2:7:12.41:155,12,0	0/0:11,0:11:17.82:0,18,212
chr10	105865200	.	TG	T	1686.63	PASS	AB=0.993;AC=36;AF=0.643;AN=56;BaseQRankSum=3.381;DP=355;FS=3.174;HRun=1;HaplotypeScore=70.9318;InbreedingCoeff=0.0039;MQ=53.63;MQ0=9;MQRankSum=-1.639;QD=5.22;ReadPosRankSum=3.778;VQSLOD=0.8885;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:36.64:37,0,74	1/1:2,1:3:8.98:87,9,0	0/1:9,1:3:11.12:11,0,11	0/0:13,0:4:2.04:0,2,6	0/1:8,0:6:12.01:15,0,12	1/1:8,3:11:32.36:220,32,0	1/1:11,1:12:35.25:233,35,0	0/1:22,0:21:13.36:219,0,13	1/1:13,0:13:12.49:42,12,0	0/0:14,0:14:5.37:0,5,54	0/0:1,0:1:2.99:0,3,24	0/1:15,0:15:37.64:38,0,58	0/1:10,0:10:2.01:2,0,16	0/1:17,0:17:35.61:70,0,36	1/1:7,0:7:7.75:25,8,0	0/1:9,0:9:8.06:27,0,8	0/1:26,0:24:16.48:22,0,16	0/1:19,0:18:15.50:15,0,30	1/1:16,1:17:36.54:237,37,0	1/1:3,2:4:8.88:58,9,0	1/1:10,0:10:13.50:97,13,0	0/0:4,0:4:12.02:0,12,135	1/1:7,0:7:10.50:34,11,0	0/1:24,0:24:26.18:52,0,26	1/1:3,5:8:14.74:105,15,0	0/1:16,0:15:14.85:18,0,15	1/1:8,0:7:14.97:100,15,0	1/1:10,1:11:18.57:87,19,0
chr10	105865201	.	GT	G	4303.36	PASS	AB=0.981;AC=46;AF=0.852;AN=54;BaseQRankSum=-1.410;DP=355;FS=25.830;HRun=10;HaplotypeScore=63.6664;InbreedingCoeff=0.3597;MQ=51.78;MQ0=9;MQRankSum=1.121;QD=12.69;ReadPosRankSum=0.698;VQSLOD=2.6078;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,27:34:67.78:577,68,0	1/1:3,0:3:3.97:17,4,0	0/0:11,0:3:0:0,0,0	0/1:14,0:4:0.26:0,0,1	1/1:2,6:6:14.99:130,15,0	1/1:10,1:11:5.89:53,6,0	0/1:11,1:12:3.32:18,0,3	0/1:22,0:21:3.35:41,0,3	1/1:1,12:13:32.99:286,33,0	1/1:2,12:14:29.98:260,30,0	./.	1/1:9,6:15:9.84:204,10,0	1/1:2,8:10:13.12:127,13,0	1/1:7,10:17:24.06:280,24,0	1/1:0,7:7:15:130,15,0	1/1:5,4:9:22.44:177,22,0	1/1:6,21:25:32.76:383,33,0	1/1:6,11:16:29.97:255,30,0	1/1:17,0:17:10.05:56,10,0	1/1:5,0:4:0.41:1,0,0	1/1:10,0:10:4.15:18,4,0	0/0:4,0:4:12.03:0,12,133	1/1:0,7:7:17.79:141,18,0	1/1:7,17:24:53.96:466,54,0	1/1:8,0:8:7.01:32,7,0	1/1:3,13:15:41.98:360,42,0	0/1:8,0:7:13.31:13,0,17	1/1:2,9:11:32.91:275,33,0
chr10	105865210	.	TTGTTTTG	T	1403.51	PASS	AB=1.000;AC=12;AF=0.222;AN=54;BaseQRankSum=2.482;DP=347;FS=5.480;HRun=0;HaplotypeScore=109.5568;InbreedingCoeff=0.5151;MQ=50.59;MQ0=8;MQRankSum=-4.494;QD=17.99;ReadPosRankSum=-4.166;VQSLOD=1.0595;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:47.13:0,47,1398	0/0:3,0:3:6.02:0,6,104	0/1:6,0:3:1.10:1,0,51	0/0:18,0:8:11.31:0,11,125	0/0:7,0:5:5.32:0,5,200	0/1:11,0:11:11.26:11,0,218	0/0:12,0:12:4.67:0,5,255	1/1:6,12:17:41.60:799,42,0	0/0:14,0:14:34.85:0,35,469	0/0:16,0:16:41.40:0,41,830	./.	0/0:18,0:18:45.66:0,46,806	0/0:10,0:10:20.74:0,21,443	0/0:17,0:17:25.07:0,25,635	0/0:7,0:7:14.79:0,15,295	0/0:9,0:9:12.85:0,13,476	0/0:29,0:27:41.54:0,42,777	0/0:16,0:16:32.16:0,32,484	1/1:13,1:16:31.40:429,31,0	1/1:3,2:4:10.24:126,10,0	1/1:2,5:7:5.95:90,6,0	0/0:4,0:4:12.04:0,12,428	0/0:8,0:8:7.88:0,8,283	0/0:23,0:23:59.52:0,60,1314	0/1:8,0:8:10.25:10,0,73	0/0:16,0:15:34.31:0,34,696	0/1:7,0:6:8.02:95,0,8	0/0:11,0:11:31.90:0,32,492
chr10	105867172	.	A	AT	1533.39	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-5.544;DP=465;FS=0.000;HRun=11;HaplotypeScore=58.1932;InbreedingCoeff=0.9365;MQ=64.98;MQ0=0;MQRankSum=0.652;QD=15.97;ReadPosRankSum=-1.838;VQSLOD=3.6739;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:41:97.57:0,98,747	0/0:7,0:7:17.92:0,18,137	0/0:14,0:8:12.81:0,13,100	0/0:8,0:6:13.93:0,14,91	0/0:11,0:11:29.88:0,30,232	0/0:16,0:16:23.50:0,24,243	0/0:17,0:17:32.82:0,33,255	1/1:9,25:35:79.30:767,79,0	0/0:8,0:8:17.93:0,18,139	0/0:15,0:15:29.87:0,30,232	0/0:11,0:10:17.90:0,18,139	0/0:13,0:13:32.87:0,33,255	0/0:16,0:16:32.81:0,33,252	0/0:16,0:16:29.84:0,30,232	0/0:8,0:9:22.96:0,23,168	0/0:7,0:7:11.93:0,12,93	0/0:27,2:29:44.23:0,44,523	0/0:21,1:22:26.32:0,26,385	1/1:3,11:14:27.04:269,27,0	1/1:6,13:20:15.64:314,16,0	1/1:5,8:14:5.68:199,6,0	0/0:7,0:7:14.92:0,15,116	0/0:12,0:12:23.85:0,24,183	0/0:18,0:17:41.68:0,42,324	0/0:19,0:19:44.79:0,45,348	0/0:31,0:31:68.68:0,69,534	1/1:4,8:12:15.03:152,15,0	0/0:22,0:22:53.79:0,54,418
chr10	105872518	.	GC	G	3023.67	PASS	AB=0.686;AC=47;AF=0.940;AN=50;BaseQRankSum=1.734;DP=257;FS=10.839;HRun=2;HaplotypeScore=67.8565;InbreedingCoeff=-0.0684;MQ=36.59;MQ0=0;MQRankSum=1.524;QD=11.81;ReadPosRankSum=4.293;VQSLOD=1.0671;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:17:30.39:205,30,0	./.	./.	./.	1/1:1,13:14:20.28:155,20,0	1/1:0,13:13:29.72:221,30,0	1/1:0,13:12:20.92:161,21,0	0/1:6,8:14:3.70:73,0,4	1/1:0,13:13:23.26:174,23,0	1/1:0,7:7:20.81:149,21,0	1/1:1,4:5:2.88:15,3,0	1/1:1,10:10:11.77:76,12,0	1/1:0,8:8:14.84:109,15,0	1/1:0,11:11:21.68:159,22,0	1/1:0,10:10:20.63:138,21,0	1/1:3,15:17:34.43:242,34,0	1/1:0,9:9:14.94:114,15,0	1/1:0,2:2:2.88:15,3,0	1/1:2,10:12:9.82:177,10,0	1/1:3,1:4:2.99:23,3,0	1/1:1,4:5:8.88:63,9,0	1/1:0,10:9:11.73:76,12,0	1/1:0,5:5:11.85:85,12,0	1/1:1,5:6:13.13:91,13,0	1/1:1,6:7:11.84:83,12,0	1/1:0,20:20:53.48:387,53,0	0/1:3,7:9:5.84:58,0,6	0/1:8,2:10:37.17:73,0,37
chr10	105874267	.	AC	A	3716.38	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.181;DP=595;FS=9.341;HRun=6;HaplotypeScore=58.5036;InbreedingCoeff=0.9906;MQ=68.05;MQ0=0;MQRankSum=-1.639;QD=25.81;ReadPosRankSum=0.601;VQSLOD=3.2873;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:75.15:0,75,906	0/0:10,0:10:30.08:0,30,380	0/0:18,0:14:41.89:0,42,481	0/0:21,0:15:38.92:0,39,428	0/0:25,0:25:69.20:0,69,880	0/0:30,0:30:69.17:0,69,849	0/0:23,0:23:63.15:0,63,793	1/1:6,31:36:90.09:929,90,0	0/0:17,0:17:45.09:0,45,544	0/0:14,0:14:42.12:0,42,526	0/0:22,0:22:54.13:0,54,655	0/0:15,0:15:42.14:0,42,551	0/0:17,0:17:48.12:0,48,586	0/0:25,0:25:75.21:0,75,956	0/0:23,0:23:63.20:0,63,827	0/0:20,0:20:60.20:0,60,788	0/0:33,0:33:93.24:0,93,1161	0/0:19,0:19:57.10:0,57,696	1/1:5,13:18:39.06:398,39,0	1/1:3,24:27:72.09:746,72,0	1/1:3,30:33:72.18:774,72,0	0/0:5,0:5:12.04:0,12,158	0/0:10,0:10:27.05:0,27,323	0/0:24,0:24:66.19:0,66,838	0/0:20,0:20:60.20:0,60,788	0/0:22,0:22:63.15:0,63,807	1/1:1,28:29:81.20:870,81,0	0/0:9,0:9:18.06:0,18,237
chr10	105874810	.	A	AGT	2557.93	PASS	AB=0.832;AC=19;AF=0.339;AN=56;BaseQRankSum=-9.184;DP=693;FS=3.787;HRun=0;HaplotypeScore=94.7750;InbreedingCoeff=0.6907;MQ=62.09;MQ0=2;MQRankSum=-0.685;QD=10.19;ReadPosRankSum=-3.153;VQSLOD=2.5504;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:61.96:0,62,674	1/1:4,0:6:3:26,3,0	0/0:27,0:12:0.90:0,1,72	0/0:16,0:11:11.99:0,12,119	0/0:25,0:25:56.27:0,56,582	0/1:7,10:18:13.26:251,0,13	1/1:14,10:25:18.03:278,18,0	1/1:25,9:35:42.83:484,43,0	0/0:20,0:21:32.91:0,33,347	0/0:23,0:23:23.90:0,24,254	0/0:17,0:17:32.82:0,33,377	0/1:39,2:42:8.84:9,0,750	0/0:26,0:26:47.94:0,48,508	0/0:29,0:32:68.67:0,69,710	0/0:32,0:33:64.71:0,65,688	0/0:31,0:33:69.02:0,69,757	0/0:35,0:36:71.13:0,71,720	0/0:27,0:32:17.03:0,17,383	1/1:21,7:24:17.91:257,18,0	1/1:14,9:23:14.80:231,15,0	1/1:8,18:29:42.14:649,42,0	0/1:15,1:16:16.25:16,0,279	0/0:15,0:15:21.04:0,21,230	0/0:40,0:40:76.95:0,77,817	1/1:4,11:15:18.06:278,18,0	0/0:19,0:20:36.98:0,37,364	1/1:4,9:14:18.06:278,18,0	0/0:14,0:13:9.03:0,9,103
chr10	105875472	.	T	TC	6432.20	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-16.531;DP=744;FS=0.329;HRun=1;HaplotypeScore=66.9796;InbreedingCoeff=0.9998;MQ=90.01;MQ0=0;MQRankSum=0.069;QD=39.70;ReadPosRankSum=-0.752;VQSLOD=5.0332;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,1684	0/0:10,0:10:30.05:0,30,344	0/0:28,0:28:81.14:0,81,961	0/0:29,0:29:80.18:0,80,868	0/0:21,0:21:63.20:0,63,805	0/0:17,0:17:48.14:0,48,596	0/0:33,0:33:96.29:0,96,1216	1/1:5,46:51:99:1938,138,0	0/0:29,0:29:84.26:0,84,1074	0/0:34,0:34:99:0,99,1268	0/0:15,0:15:45.13:0,45,557	0/0:28,0:28:84.27:0,84,1077	0/0:25,0:25:75.24:0,75,971	0/0:27,0:27:78.25:0,78,1011	0/0:45,0:45:99:0,132,1681	0/0:22,0:22:66.20:0,66,833	0/0:24,0:24:72.23:0,72,934	0/0:14,0:14:42.14:0,42,544	1/1:0,21:21:63.16:838,63,0	1/1:0,14:14:39.06:550,39,0	1/1:1,43:44:99:1776,120,0	0/0:26,0:26:75.21:0,75,932	0/0:19,0:19:54.16:0,54,686	0/0:24,0:24:61.84:0,62,817	0/0:18,0:18:54.16:0,54,675	0/0:37,0:37:99:0,105,1316	1/1:0,32:32:90.30:1331,90,0	0/0:13,0:13:39.11:0,39,490
chr10	105878403	.	A	AT	5247.30	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.394;DP=558;FS=1.649;HRun=4;HaplotypeScore=79.8586;InbreedingCoeff=0.9954;MQ=81.60;MQ0=0;MQRankSum=-4.067;QD=38.02;ReadPosRankSum=-1.410;VQSLOD=3.8321;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,1429	0/0:7,0:7:18:0,18,189	0/0:13,0:13:27.01:0,27,281	0/0:17,0:17:48.07:0,48,506	0/0:10,0:10:27.08:0,27,306	0/0:13,0:13:39.11:0,39,442	0/0:19,0:19:51.12:0,51,567	1/1:1,24:25:72.24:985,72,0	0/0:19,0:19:57.15:0,57,633	0/0:21,0:21:54.15:0,54,610	0/0:13,0:13:39.11:0,39,442	0/0:27,0:27:75.20:0,75,841	0/0:14,0:14:42.10:0,42,467	0/0:23,0:23:66.17:0,66,738	0/0:19,0:19:51.13:0,51,569	0/0:17,0:17:51.15:0,51,579	0/0:24,0:24:66.12:0,66,714	0/0:31,0:31:90.24:0,90,1010	1/1:2,19:21:57.19:777,57,0	1/1:1,10:11:27.09:368,27,0	1/1:0,54:54:99:2051,150,0	0/0:12,0:12:36.09:0,36,399	0/0:12,0:12:33.09:0,33,374	0/0:27,0:27:69.19:0,69,782	0/0:13,0:13:39.11:0,39,442	0/0:19,0:19:57.15:0,57,631	1/1:0,27:27:78.26:1066,78,0	0/0:6,0:6:18.05:0,18,204
chr10	105879305	.	TCAAACAAACAAA	T	4996.54	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.075;DP=708;FS=2.269;HRun=0;HaplotypeScore=230.8891;InbreedingCoeff=0.9554;MQ=56.60;MQ0=6;MQRankSum=-7.912;QD=41.99;ReadPosRankSum=0.351;VQSLOD=4.6254;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:63.19:0,63,3340	1/1:3,9:12:18.06:564,18,0	0/0:18,0:13:2.13:0,2,246	0/0:18,0:14:18.06:0,18,585	0/0:29,0:29:75.23:0,75,3703	0/0:26,0:27:67:0,67,3557	0/0:34,0:34:78.24:0,78,3279	1/1:23,0:22:30.09:489,30,0	0/0:22,0:22:48.14:0,48,2068	0/0:28,0:28:54.18:0,54,2842	0/0:19,0:19:39.13:0,39,2025	0/0:38,0:38:99:0,102,5129	0/0:20,0:20:33.11:0,33,1919	0/0:24,0:24:60.19:0,60,2947	0/0:33,0:33:93.30:0,93,4320	0/0:21,0:21:51.17:0,51,2020	0/0:39,0:39:48.93:0,49,3241	0/0:39,0:38:99:0,108,5351	1/1:8,14:22:42.07:1087,42,0	1/1:5,16:21:33.08:844,33,0	1/1:9,11:20:17.55:533,18,0	0/0:24,0:24:57.15:0,57,2498	0/0:23,0:23:57.20:0,57,3048	0/0:43,0:44:99:0,105,5224	0/0:17,0:17:48.16:0,48,2772	0/0:24,0:24:66.23:0,66,3624	1/1:4,17:21:42.14:1479,42,0	0/0:23,0:23:60.20:0,60,3202
chr10	105879322	.	C	CAA	954.70	PASS	AB=0.943;AC=5;AF=0.089;AN=56;BaseQRankSum=4.609;DP=728;FS=2.931;HRun=3;HaplotypeScore=104.8974;InbreedingCoeff=-0.1018;MQ=56.85;MQ0=8;MQRankSum=-3.024;QD=9.01;ReadPosRankSum=-0.693;VQSLOD=0.1982;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.25:0,87,1175	0/1:15,0:15:85.84:86,0,86	0/0:21,0:14:13.02:0,13,301	0/0:19,0:13:36.10:0,36,462	0/0:30,0:30:87.23:0,87,1146	0/0:28,0:28:84.20:0,84,1149	0/0:31,0:31:90.27:0,90,1231	0/1:15,10:24:99:432,0,295	0/0:22,0:22:57.17:0,57,776	0/0:22,0:22:57.19:0,57,796	0/0:20,0:19:51.17:0,51,711	0/0:42,0:42:99:0,120,1638	0/0:17,0:17:48.14:0,48,652	0/0:22,0:22:63.20:0,63,864	0/0:36,0:36:99:0,105,1449	0/0:22,0:22:63.20:0,63,860	0/0:36,0:36:96.27:0,96,1291	0/0:43,0:42:99:0,126,1725	0/1:23,0:23:99:194,0,264	0/1:23,0:23:99:194,0,241	0/1:20,0:20:99:167,0,181	0/0:23,0:23:63.16:0,63,842	0/0:19,0:19:57.19:0,57,797	0/0:39,0:39:99:0,108,1468	0/0:21,0:21:63.21:0,63,879	0/0:27,0:27:81.27:0,81,1133	0/0:24,0:24:8.34:0,8,297	0/0:27,0:27:75.25:0,75,1039
chr10	105882581	.	GAACCA	G	2738.12	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.776;DP=617;FS=8.178;HRun=0;HaplotypeScore=119.2899;InbreedingCoeff=0.9883;MQ=68.30;MQ0=3;MQRankSum=-6.532;QD=24.89;ReadPosRankSum=-3.739;VQSLOD=2.0041;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:78.25:0,78,2137	1/1:4,6:10:12.04:226,12,0	0/0:35,0:27:51.34:0,51,1117	0/0:37,0:24:23.68:0,24,408	0/0:21,0:21:48.16:0,48,1342	0/0:27,0:27:69.23:0,69,1931	0/0:24,0:24:36.08:0,36,854	1/1:11,16:27:48.09:737,48,0	0/0:20,0:20:48.12:0,48,1152	0/0:20,0:20:45.15:0,45,1294	0/0:12,0:12:27.09:0,27,763	0/0:20,0:20:51.18:0,51,1471	0/0:10,0:10:24.07:0,24,581	0/0:20,0:20:51.18:0,51,1435	0/0:27,0:27:60.16:0,60,1594	0/0:28,0:28:63.21:0,63,1720	0/0:28,0:28:69.24:0,69,1991	0/0:22,0:22:57.13:0,57,1558	1/1:12,7:19:21.04:322,21,0	1/1:2,9:11:18.06:339,18,0	1/1:9,15:24:27.09:508,27,0	0/0:18,0:18:45.15:0,45,1192	0/0:17,0:17:42.13:0,42,1147	0/0:22,0:22:51.18:0,51,1472	0/0:14,0:14:34.93:0,35,918	0/0:40,0:40:99:0,99,2844	1/1:4,15:19:42.14:791,42,0	0/0:7,0:7:18.06:0,18,503
chr10	105885113	.	TG	T	500.79	PASS	AB=0.938;AC=7;AF=0.125;AN=56;BaseQRankSum=4.612;DP=406;FS=18.752;HRun=8;HaplotypeScore=43.8819;InbreedingCoeff=0.7731;MQ=75.59;MQ0=2;MQRankSum=-2.664;QD=9.27;ReadPosRankSum=0.562;VQSLOD=0.3295;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.14:0,63,732	0/0:0,0:3:5.75:0,6,29	0/1:13,0:14:5.28:5,0,198	0/0:15,0:11:22.80:0,23,242	0/0:20,0:20:51.15:0,51,605	1/1:2,7:9:18.03:174,18,0	1/1:3,11:14:15.02:145,15,0	0/0:13,0:13:12.04:0,12,145	0/0:11,0:11:33.09:0,33,387	0/0:11,0:11:21.06:0,21,253	0/0:11,0:11:18.06:0,18,217	0/0:16,0:16:42.12:0,42,495	0/0:15,0:15:42.11:0,42,494	0/0:13,0:13:27.07:0,27,314	0/0:21,0:21:57.16:0,57,668	0/0:16,0:16:48.15:0,48,579	0/0:15,0:15:39.11:0,39,460	0/0:12,0:12:30.09:0,30,362	0/0:12,0:12:24.07:0,24,290	0/0:9,0:9:21.06:0,21,253	0/0:28,0:28:69.21:0,69,833	0/0:17,0:17:42.10:0,42,491	0/0:14,0:14:13.15:0,13,429	0/0:21,0:21:51.13:0,51,595	1/1:3,13:16:32.85:318,33,0	0/0:14,1:15:7.13:0,7,369	0/0:16,0:16:36.09:0,36,412	0/0:4,0:4:9.03:0,9,109
chr10	105887788	.	A	AG	359.89	PASS	AB=1.000;AC=11;AF=0.229;AN=48;BaseQRankSum=-2.651;DP=83;FS=11.432;HRun=8;HaplotypeScore=16.9863;InbreedingCoeff=0.4163;MQ=103.00;MQ0=0;MQRankSum=0.000;QD=10.58;ReadPosRankSum=0.268;VQSLOD=0.1954;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:2:5.04:0,5,33	1/1:0,1:1:3.01:35,3,0	0/1:8,0:7:0.70:1,0,65	0/1:5,0:5:15.25:19,0,15	./.	0/0:5,0:5:12.01:0,12,110	0/0:7,0:7:18:0,18,165	1/1:0,5:5:15.03:163,15,0	0/0:1,0:1:3:0,3,27	0/0:3,0:3:2.79:0,3,27	0/1:2,0:2:0:0,0,0	0/0:3,0:3:9:0,9,82	0/0:1,0:1:3:0,3,27	0/0:3,0:3:9:0,9,82	0/0:3,0:3:9:0,9,82	0/0:2,0:2:6:0,6,55	0/0:2,0:2:5.98:0,6,50	0/0:2,0:2:5.96:0,6,47	./.	./.	1/1:2,7:9:15.04:173,15,0	0/0:2,0:2:2.84:0,3,27	0/0:1,0:1:3:0,3,27	0/0:3,0:3:9:0,9,82	0/0:3,0:3:9:0,9,82	0/0:4,0:4:9:0,9,82	1/1:0,4:4:8.71:104,9,0	./.
chr10	105896745	.	G	GGGTGGT	8319.14	PASS	AB=0.656;AC=17;AF=0.304;AN=56;BaseQRankSum=-7.478;DP=703;FS=5.303;HRun=0;HaplotypeScore=151.9371;InbreedingCoeff=0.8914;MQ=69.73;MQ0=0;MQRankSum=-10.697;QD=33.96;ReadPosRankSum=-2.927;VQSLOD=4.0827;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:57.20:0,57,1221	1/1:4,10:14:27.09:871,27,0	0/0:12,0:12:15.56:0,16,422	0/0:17,0:16:42.11:0,42,759	0/0:17,0:17:36.12:0,36,793	1/1:10,10:23:18.06:610,18,0	1/1:11,30:43:66.01:2206,66,0	1/1:16,11:34:49.31:1038,49,0	0/0:25,0:25:69.22:0,69,1454	0/0:26,0:26:60.20:0,60,1286	0/0:9,0:9:17.67:0,18,376	0/0:33,0:33:87.29:0,87,1878	0/0:27,0:27:66.21:0,66,1412	0/0:37,0:37:93.32:0,93,2047	0/0:23,0:23:60.19:0,60,1281	0/0:32,0:32:81.26:0,81,1739	0/0:45,0:45:99:0,123,2590	0/0:29,0:29:78.23:0,78,1644	1/1:13,8:26:45.11:1115,45,0	1/1:6,9:16:18.01:493,18,0	1/1:16,25:47:6.07:196,6,0	0/0:18,0:18:36.09:0,36,748	0/0:9,0:9:27.09:0,27,592	0/0:32,0:32:75.26:0,75,1598	0/1:10,10:21:42.06:688,0,42	0/0:26,0:26:60.18:0,60,1205	1/1:6,12:21:33.11:1101,33,0	0/0:15,0:15:36.12:0,36,769
chr10	105897636	.	C	CTG	568.66	PASS	AB=0.974;AC=6;AF=0.107;AN=56;BaseQRankSum=-0.798;DP=608;FS=0.733;HRun=0;HaplotypeScore=93.8778;InbreedingCoeff=0.6207;MQ=69.82;MQ0=2;MQRankSum=1.831;QD=8.75;ReadPosRankSum=-5.093;VQSLOD=2.4589;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,2:27:8.77:0,9,579	1/1:2,7:9:18.06:290,18,0	0/0:15,0:11:5.05:0,5,35	0/1:16,1:14:39.70:40,0,44	0/0:11,0:11:24.02:0,24,254	0/1:10,0:10:0:0,0,1	0/0:19,0:19:14.96:0,15,53	1/1:28,0:28:55.26:365,55,0	0/0:31,0:31:84.22:0,84,990	0/0:17,0:17:30.07:0,30,353	0/0:6,0:6:12.04:0,12,147	0/0:34,0:34:75.18:0,75,866	0/0:29,0:29:54.09:0,54,603	0/0:37,0:37:84.14:0,84,919	0/0:28,0:28:69.17:0,69,806	0/0:19,0:20:38.92:0,39,429	0/0:43,0:44:99:0,114,1318	0/0:36,0:37:78.03:0,78,894	0/0:14,0:13:14.58:0,15,56	0/0:10,0:10:3.98:0,4,12	0/0:58,0:58:82.57:0,83,426	0/0:9,0:9:15.05:0,15,183	0/0:6,0:6:15.05:0,15,183	0/0:38,0:38:87.22:0,87,1015	0/0:8,0:8:10.19:0,10,82	0/0:19,0:19:41.99:0,42,481	0/0:20,0:19:41.08:0,41,182	0/0:6,0:6:15.05:0,15,183
chr10	105897649	.	T	TG	271.40	PASS	AB=0.632;AC=5;AF=0.089;AN=56;BaseQRankSum=4.617;DP=621;FS=3.919;HRun=1;HaplotypeScore=83.0961;InbreedingCoeff=0.6448;MQ=72.63;MQ0=8;MQRankSum=-2.999;QD=6.46;ReadPosRankSum=-1.309;VQSLOD=0.1638;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:83.82:0,84,1052	0/0:9,0:9:3.42:0,3,59	0/0:24,0:20:41.68:0,42,496	0/0:19,0:15:35.64:0,36,438	0/0:11,0:11:29.66:0,30,371	1/1:3,7:10:1.36:2,1,0	1/1:6,14:20:29.24:325,29,0	0/0:26,0:24:64.78:0,65,559	0/0:34,0:34:96.30:0,96,1223	0/0:18,0:18:47.58:0,48,617	0/0:5,0:5:15.05:0,15,194	0/0:32,0:32:93.29:0,93,1183	0/0:26,0:26:71.97:0,72,898	0/0:36,0:36:93.30:0,93,1198	0/0:28,0:28:81.26:0,81,1045	0/0:16,0:16:44.88:0,45,552	0/0:46,0:46:99:0,132,1654	0/0:30,0:30:87.02:0,87,1100	0/0:15,0:14:37.06:0,37,257	0/0:9,0:9:15.54:0,16,87	0/0:55,0:52:99:0,114,778	0/0:12,0:12:27.09:0,27,347	0/0:6,0:6:18.06:0,18,226	0/0:37,0:37:99:0,111,1428	0/1:5,7:10:6.49:51,0,6	0/0:27,0:27:75.24:0,75,961	0/0:21,0:20:50.14:0,50,335	0/0:5,0:5:15.05:0,15,195
chr10	105897651	.	T	TG	2551.10	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-1.819;DP=625;FS=4.525;HRun=7;HaplotypeScore=71.5471;InbreedingCoeff=0.8036;MQ=72.61;MQ0=8;MQRankSum=-0.495;QD=13.79;ReadPosRankSum=-2.536;VQSLOD=2.9337;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:72.18:0,72,718	0/1:10,0:10:13.93:14,0,15	0/0:22,0:19:28.07:0,28,363	0/0:20,0:16:33.10:0,33,327	0/0:13,0:13:18.02:0,18,173	0/1:10,0:10:0:0,0,0	1/1:20,0:20:30.56:354,31,0	1/1:29,0:27:44.66:236,45,0	0/0:33,0:33:84.13:0,84,811	0/0:20,0:20:54.06:0,54,513	0/0:5,0:5:15.02:0,15,145	0/0:33,0:33:87.09:0,87,830	0/0:24,0:24:63.09:0,63,606	0/0:32,0:32:66.04:0,66,625	0/0:27,0:27:72.08:0,72,681	0/0:16,0:16:38.91:0,39,358	0/0:46,0:46:99:0,120,1134	0/0:30,0:30:81.02:0,81,768	1/1:6,10:15:22.95:358,23,0	1/1:1,8:9:15.05:181,15,0	1/1:14,41:52:78.34:1068,78,0	0/0:11,0:11:27.04:0,27,260	0/0:6,0:6:18.03:0,18,174	0/0:38,0:38:93.13:0,93,897	0/1:14,0:12:5.46:54,0,5	0/0:26,0:26:69.11:0,69,664	1/1:5,17:21:40.94:476,41,0	0/0:5,0:5:15.02:0,15,145
chr10	105897652	.	G	GT	1256.76	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=5.926;DP=622;FS=4.892;HRun=1;HaplotypeScore=75.1594;InbreedingCoeff=0.0840;MQ=74.09;MQ0=8;MQRankSum=-0.904;QD=7.10;ReadPosRankSum=-0.665;VQSLOD=0.4094;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:79.27:0,79,1081	0/1:9,0:9:36.12:42,0,36	0/0:23,0:19:26.34:0,26,451	0/0:21,0:17:31.06:0,31,454	0/0:11,0:11:30.03:0,30,343	0/0:9,0:9:2.97:0,3,20	0/1:21,0:21:17.17:69,0,17	1/1:0,31:29:80.85:900,81,0	0/0:32,0:32:93.26:0,93,1229	0/0:20,0:20:57.16:0,57,726	0/0:5,0:5:15.05:0,15,200	0/0:33,0:33:99:0,99,1267	0/0:24,0:24:72.19:0,72,913	0/0:33,0:33:93.19:0,93,1129	0/0:26,0:26:78.23:0,78,1035	0/0:15,0:15:45.06:0,45,558	0/0:46,0:46:99:0,132,1695	0/0:30,0:30:90.21:0,90,1161	0/1:15,0:14:28.36:64,0,28	0/1:9,0:9:20.32:46,0,20	0/1:56,0:53:99:191,0,203	0/0:11,0:11:27.09:0,27,354	0/0:6,0:6:18.06:0,18,246	0/0:36,0:36:99:0,108,1382	0/1:14,0:12:0.37:0,0,92	0/0:26,0:26:75.10:0,75,937	0/1:22,0:21:84.63:85,0,90	0/0:5,0:5:15.05:0,15,209
chr10	105906635	.	C	CCAGGTCT	19863.10	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=5.665;DP=774;FS=2.191;HRun=0;HaplotypeScore=178.2807;InbreedingCoeff=0.9974;MQ=76.08;MQ0=0;MQRankSum=-18.727;QD=83.81;ReadPosRankSum=-4.182;VQSLOD=4.2455;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,169,4333	1/1:5,11:18:36.12:1380,36,0	0/0:20,0:20:48.16:0,48,1156	0/0:23,0:23:57.19:0,57,1245	0/0:12,0:12:33.10:0,33,804	1/1:4,11:16:39.13:1547,39,0	1/1:15,20:38:87.21:3072,87,0	1/1:19,13:33:93.31:3379,93,0	0/0:35,0:35:99:0,102,2411	0/0:40,0:40:99:0,117,3035	0/0:6,0:6:15.04:0,15,337	0/0:40,0:40:99:0,120,3110	0/0:24,0:24:69.22:0,69,1700	0/0:37,0:37:99:0,105,2610	0/0:29,0:29:84.29:0,84,2181	0/0:33,0:33:99:0,99,2572	0/0:36,0:36:99:0,105,2616	0/0:25,0:25:75.26:0,75,1924	1/1:11,16:32:84.25:2786,84,0	1/1:3,12:17:42.14:1616,42,0	1/1:13,25:43:63.22:2431,63,0	0/0:17,0:17:51.17:0,51,1223	0/0:17,0:17:45.15:0,45,1050	0/0:46,0:46:99:0,126,3127	1/1:4,13:19:48.12:1770,48,0	0/0:27,0:27:81.26:0,81,1976	1/1:2,15:21:48.16:1881,48,0	0/0:12,0:12:33.11:0,33,857
chr10	105916194	.	G	GC	2264.33	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-10.257;DP=582;FS=19.731;HRun=7;HaplotypeScore=58.7523;InbreedingCoeff=0.8825;MQ=75.84;MQ0=0;MQRankSum=0.994;QD=21.36;ReadPosRankSum=-3.590;VQSLOD=1.3851;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,126,1188	0/0:8,0:8:18.02:0,18,174	0/0:22,0:16:17.54:0,18,184	0/1:16,0:15:20.39:20,0,108	0/0:16,0:16:47.72:0,48,433	0/0:20,0:20:54.07:0,54,516	0/0:25,0:25:63.09:0,63,608	1/1:5,29:34:80.88:924,81,0	0/0:20,0:20:54.08:0,54,521	0/0:23,0:23:63.97:0,64,602	0/0:8,0:8:24.04:0,24,231	0/0:33,0:33:81.12:0,81,781	0/0:18,0:18:48.06:0,48,456	0/0:12,0:12:36.04:0,36,340	0/0:31,0:31:84.12:0,84,805	0/0:27,0:27:71.58:0,72,667	0/0:22,0:21:63.08:0,63,602	0/0:24,0:25:68.10:0,68,629	1/1:5,9:15:33.06:367,33,0	1/1:1,8:9:24.02:272,24,0	1/1:2,14:16:24.84:388,25,0	0/0:10,0:10:27.04:0,27,257	0/0:13,0:13:36.06:0,36,347	0/0:34,0:34:84.01:0,84,793	0/0:20,0:20:57.91:0,58,538	0/0:30,0:30:81.03:0,81,755	1/1:2,14:16:39.12:471,39,0	0/0:10,0:10:27.04:0,27,260
chr10	105920000	.	A	AT	132.75	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.263;DP=626;FS=0.000;HRun=10;HaplotypeScore=62.7196;InbreedingCoeff=0.9212;MQ=71.28;MQ0=1;MQRankSum=-0.570;QD=14.75;ReadPosRankSum=0.285;VQSLOD=3.6973;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:41.92:0,42,341	1/1:2,7:9:21.52:225,22,0	0/0:22,0:12:18.16:0,18,124	0/0:23,0:14:16.74:0,17,159	0/0:30,0:30:74.74:0,75,604	0/0:25,1:27:8.82:0,9,436	0/0:13,0:13:29.95:0,30,244	0/0:35,0:35:86.83:0,87,707	0/0:21,0:22:52.97:0,53,425	0/0:20,0:20:44.89:0,45,362	0/0:19,0:19:47.94:0,48,394	0/0:29,0:30:76.91:0,77,619	0/0:22,0:22:44.90:0,45,367	0/0:20,0:20:41.93:0,42,345	0/0:26,1:27:33.93:0,34,485	0/0:32,0:32:77.65:0,78,635	0/0:40,0:39:98.22:0,98,792	0/0:16,0:16:41.95:0,42,345	0/0:22,0:23:46.96:0,47,375	0/0:23,0:23:56.93:0,57,468	0/0:14,0:14:29.91:0,30,240	0/0:13,0:13:35.96:0,36,296	0/0:16,0:18:45.96:0,46,347	0/0:16,0:16:41.91:0,42,338	0/0:26,0:26:71.89:0,72,587	0/0:24,0:24:59.89:0,60,489	0/0:23,0:24:61.92:0,62,492	0/0:13,0:13:29.96:0,30,246
chr10	105926905	.	G	GA	2272.48	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.610;DP=646;FS=0.476;HRun=6;HaplotypeScore=60.3333;InbreedingCoeff=0.9629;MQ=75.75;MQ0=0;MQRankSum=0.609;QD=30.30;ReadPosRankSum=0.315;VQSLOD=4.1078;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.22:0,96,979	0/0:9,0:9:27.06:0,27,275	0/0:22,0:22:33.54:0,34,384	0/0:13,0:13:6.84:0,7,191	0/0:30,0:30:80.97:0,81,826	1/1:2,23:25:69.22:868,69,0	1/1:2,26:28:69.22:868,69,0	0/0:25,0:25:75.14:0,75,751	0/0:16,0:16:48.09:0,48,482	0/0:21,0:21:54.12:0,54,551	0/0:19,0:19:51.10:0,51,513	0/0:26,0:26:72.16:0,72,734	0/0:18,0:18:48.09:0,48,483	0/0:16,0:16:48.11:0,48,490	0/0:28,0:28:69.15:0,69,704	0/0:30,0:30:90.18:0,90,904	0/0:37,0:37:99:0,99,1009	0/0:25,0:25:72.16:0,72,735	0/0:26,0:26:63.12:0,63,635	0/0:19,0:19:57.13:0,57,582	0/0:17,0:17:48.11:0,48,490	0/0:23,0:23:60.13:0,60,612	0/0:20,0:20:57.13:0,57,581	0/0:28,0:28:72.16:0,72,735	1/1:3,19:22:54.17:679,54,0	0/0:41,0:41:99:0,108,1102	0/0:22,0:22:63.12:0,63,635	0/0:5,0:5:15.03:0,15,153
chr10	105927774	.	CCTGT	C	3944.28	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=13.154;DP=697;FS=3.794;HRun=0;HaplotypeScore=119.9453;InbreedingCoeff=0.9022;MQ=70.82;MQ0=5;MQRankSum=-3.419;QD=16.37;ReadPosRankSum=-1.115;VQSLOD=2.7360;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:87.26:0,87,1975	1/1:4,0:7:12.01:112,12,0	0/1:27,0:18:22.46:22,0,198	0/0:27,0:23:20.52:0,21,266	0/0:29,0:29:66.21:0,66,1529	1/1:11,0:19:21.02:195,21,0	1/1:6,0:24:36.04:335,36,0	1/1:19,13:32:39.10:567,39,0	0/0:27,0:27:60.18:0,60,1341	0/0:23,0:23:45.15:0,45,1042	0/0:14,0:14:27.09:0,27,644	0/0:24,0:24:54.17:0,54,1196	0/0:29,0:29:56.93:0,57,1342	0/0:28,0:28:45.15:0,45,1029	0/0:43,0:43:99:0,102,2328	0/0:31,0:31:72.23:0,72,1672	0/0:24,0:24:48.16:0,48,1097	0/0:21,0:21:48.14:0,48,1074	1/1:15,7:21:21.07:334,21,0	1/1:12,13:25:36.12:561,36,0	1/1:14,24:38:66.23:1051,66,0	0/0:16,0:16:15.05:0,15,358	0/0:18,0:18:33.11:0,33,763	0/0:28,1:29:9.43:0,9,1222	1/1:9,0:21:21.02:195,21,0	0/0:22,0:22:45.15:0,45,1051	1/1:8,18:25:35.12:571,35,0	0/0:9,0:9:21.07:0,21,430
chr10	105931523	.	CGT	C	1065.93	PASS	AB=0.884;AC=19;AF=0.365;AN=52;BaseQRankSum=7.815;DP=810;FS=0.000;HRun=0;HaplotypeScore=114.1563;InbreedingCoeff=-0.3829;MQ=59.70;MQ0=8;MQRankSum=1.103;QD=2.05;ReadPosRankSum=2.604;VQSLOD=1.9444;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,7:36:99:137,0,389	0/0:15,0:15:11.86:0,12,87	./.	./.	0/0:25,1:28:29.49:0,29,792	1/1:23,0:22:23.55:93,24,0	0/1:41,0:41:16.96:81,0,17	0/0:32,0:32:41.79:0,42,324	0/1:15,2:17:38.29:38,0,311	0/1:21,0:21:32.05:32,0,409	0/1:9,3:13:92.59:93,0,138	0/1:31,3:36:87.67:88,0,527	0/1:13,5:19:18.26:18,0,273	0/1:26,2:29:19.69:20,0,681	0/1:32,6:38:98.67:99,0,761	0/1:30,6:39:99:166,0,815	0/1:40,3:44:99:104,0,810	0/1:23,5:28:44.22:44,0,477	0/0:17,0:21:9.63:0,10,53	0/0:15,0:15:14.96:0,15,123	0/0:32,0:72:11.75:0,12,110	0/0:18,0:19:24.07:0,24,340	0/1:13,5:19:75.41:75,0,243	0/1:34,2:37:25.33:25,0,621	0/1:25,0:25:5.22:50,0,5	0/1:28,3:31:54.40:54,0,485	0/0:10,0:17:9:0,9,77	0/1:21,1:22:3.19:3,0,529
chr10	105931551	.	TGTGC	T	1601.82	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=2.577;DP=748;FS=0.967;HRun=0;HaplotypeScore=127.1266;InbreedingCoeff=0.3104;MQ=58.28;MQ0=5;MQRankSum=0.221;QD=5.91;ReadPosRankSum=-1.237;VQSLOD=2.6348;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:23.63:0,24,968	0/1:14,0:13:8.13:59,0,8	0/0:30,0:11:26.09:0,26,247	0/0:30,0:15:28.87:0,29,266	0/0:26,0:26:55.22:0,55,1390	1/1:2,17:18:26.71:478,27,0	1/1:10,35:45:20.61:326,21,0	0/1:29,0:29:99:111,0,141	0/0:15,0:15:36:0,36,613	0/0:22,0:22:59.91:0,60,982	0/0:11,0:11:2.30:0,2,294	0/1:34,0:34:2.21:2,0,1037	0/0:19,0:19:14.08:0,14,536	0/0:29,0:29:53.67:0,54,1416	0/0:33,0:33:76.95:0,77,1482	0/0:43,0:43:88.49:0,88,1968	0/0:45,0:45:85.56:0,86,1746	0/0:25,0:25:64.53:0,65,1040	0/1:13,0:13:22.46:95,0,22	0/1:15,0:13:42.80:43,0,67	0/1:73,0:72:27.16:282,0,27	0/0:14,0:14:21.03:0,21,431	0/0:17,0:17:30.79:0,31,489	0/0:39,0:39:68.34:0,68,1366	1/1:3,13:16:17.64:295,18,0	0/0:26,0:26:71.02:0,71,1170	0/1:13,0:13:42.97:77,0,43	0/0:19,0:18:19.50:0,20,745
chr10	105931705	.	TCTGCAGAGAGATTGCAGTCGCGCAC	T	3639.69	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.891;DP=637;FS=0.625;HRun=0;HaplotypeScore=380.5401;InbreedingCoeff=0.9523;MQ=72.72;MQ0=1;MQRankSum=-5.570;QD=52.00;ReadPosRankSum=-2.092;VQSLOD=1.3416;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,129,12902	0/0:8,0:8:24.08:0,24,2564	0/0:15,0:11:26.42:0,26,1600	0/0:24,0:22:40.58:0,41,1654	0/0:17,0:17:51.16:0,51,4630	0/0:19,0:19:57.20:0,57,6020	0/0:33,0:33:84.25:0,84,8169	1/1:0,13:13:35.89:676,36,0	0/0:17,0:17:45.15:0,45,4469	0/0:21,0:21:54.19:0,54,5231	0/0:10,0:10:23.12:0,23,2269	0/0:32,0:32:93.32:0,93,10151	0/0:19,0:19:57.17:0,57,5630	0/0:29,0:29:84.29:0,84,8363	0/0:40,0:40:99:0,117,11756	0/0:45,0:45:99:0,135,13276	0/0:33,0:33:93.28:0,93,9791	0/0:28,0:28:84.29:0,84,8299	1/1:0,10:10:29.95:635,30,0	1/1:0,10:10:14.98:669,15,0	1/1:0,25:25:3.01:205,3,0	0/0:18,0:18:54.16:0,54,4796	0/0:14,0:14:42.14:0,42,4560	0/0:33,0:33:99:0,99,9899	0/0:17,0:17:48.15:0,48,4928	0/0:32,0:32:90.31:0,90,8876	1/1:0,12:12:24.04:1454,24,0	0/0:17,0:17:51.14:0,51,4648
chr10	105932236	.	A	AAG	1636.11	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.058;DP=638;FS=0.000;HRun=0;HaplotypeScore=96.9169;InbreedingCoeff=0.9962;MQ=77.63;MQ0=0;MQRankSum=-3.513;QD=23.37;ReadPosRankSum=-2.845;VQSLOD=3.1143;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.27:0,93,1411	0/0:11,0:11:33.11:0,33,488	0/0:17,0:15:26.74:0,27,525	0/0:21,0:21:58.92:0,59,664	0/0:19,0:19:54.18:0,54,871	1/1:3,17:21:48.63:742,49,0	1/1:6,23:30:38.44:619,38,0	0/0:26,0:25:65.98:0,66,811	0/0:29,0:29:84.29:0,84,1364	0/0:15,0:15:45.15:0,45,684	0/0:12,0:12:33.10:0,33,492	0/0:40,0:40:99:0,117,1821	0/0:23,0:23:69.18:0,69,1046	0/0:23,0:23:69.21:0,69,1069	0/0:24,0:24:72.22:0,72,1123	0/0:36,0:36:99:0,105,1659	0/0:22,0:22:66.17:0,66,998	0/0:23,0:23:66.22:0,66,1057	0/0:13,0:13:36.09:0,36,419	0/0:14,0:14:19.11:0,19,353	0/0:64,0:64:99:0,177,1987	0/0:12,0:12:33.11:0,33,536	0/0:19,0:19:54.17:0,54,848	0/0:24,0:24:66.15:0,66,994	1/1:11,7:19:40.17:418,40,0	0/0:27,0:27:75.24:0,75,1173	0/0:14,0:14:33.05:0,33,344	0/0:9,0:9:24.08:0,24,378
chr10	105932237	.	T	TG	3833.73	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-2.469;DP=635;FS=2.638;HRun=8;HaplotypeScore=77.9375;InbreedingCoeff=0.9638;MQ=76.96;MQ0=0;MQRankSum=-1.480;QD=18.89;ReadPosRankSum=-2.870;VQSLOD=2.9216;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,1:30:37.39:0,37,592	0/0:1,0:11:20.37:0,20,60	0/0:17,0:15:17.83:0,18,210	0/0:20,0:20:39.91:0,40,341	0/0:19,0:19:51.03:0,51,467	1/1:22,0:22:48.95:276,49,0	1/1:29,0:29:49.56:336,50,0	1/1:9,16:25:42.12:485,42,0	0/0:29,0:29:84.03:0,84,764	0/0:15,0:15:33.01:0,33,302	0/0:11,0:11:27.01:0,27,247	0/0:39,0:39:93.02:0,93,846	0/0:24,0:24:60.02:0,60,549	0/0:22,0:22:60.03:0,60,549	0/0:25,0:25:63.03:0,63,576	0/0:35,0:35:90.04:0,90,824	0/0:19,1:20:22.41:0,22,460	0/0:23,0:23:57:0,57,516	1/1:4,9:13:2.62:284,3,0	1/1:2,12:14:32.89:358,33,0	1/1:12,50:62:99:1593,138,0	0/0:12,0:12:30.01:0,30,275	0/0:18,0:18:48.02:0,48,439	0/0:25,0:25:54.01:0,54,494	1/1:21,0:21:32.31:226,32,0	0/0:27,0:27:69.03:0,69,631	1/1:3,13:16:23.96:277,24,0	0/0:10,0:10:17.99:0,18,165
chr10	105933329	.	C	CGGAGG	274.13	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.719;DP=714;FS=1.850;HRun=0;HaplotypeScore=133.1114;InbreedingCoeff=0.9585;MQ=75.89;MQ0=0;MQRankSum=-1.923;QD=45.69;ReadPosRankSum=-0.591;VQSLOD=3.3853;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,2068	1/1:1,2:6:11.63:360,12,0	0/0:17,0:17:20.47:0,20,610	0/0:11,0:11:24:0,24,388	0/0:14,0:14:36.12:0,36,714	0/0:17,0:17:51.18:0,51,1036	0/0:37,0:37:99:0,102,2018	0/0:30,0:30:81.26:0,81,1609	0/0:25,0:25:69.24:0,69,1377	0/0:28,0:28:78.27:0,78,1569	0/0:15,0:15:36.12:0,36,720	0/0:34,0:34:81.26:0,81,1584	0/0:30,0:30:81.28:0,81,1644	0/0:30,0:30:81.28:0,81,1642	0/0:33,0:33:99:0,99,2010	0/0:37,0:37:99:0,108,2120	0/0:35,0:35:99:0,99,2009	0/0:29,0:29:69.24:0,69,1380	0/0:17,0:17:42.13:0,42,819	0/0:16,0:16:39.13:0,39,791	0/0:59,0:59:99:0,169,3346	0/0:17,0:17:45.15:0,45,913	0/0:16,0:16:39.12:0,39,756	0/0:29,0:29:84.29:0,84,1705	0/0:24,0:24:66.20:0,66,1302	0/0:23,0:23:66.23:0,66,1319	0/0:32,0:32:90.31:0,90,1822	0/0:17,0:17:45.15:0,45,914
chr10	105934055	.	TCA	T	81.86	PASS	AB=0.950;AC=12;AF=0.286;AN=42;BaseQRankSum=2.637;DP=508;FS=4.668;HRun=0;HaplotypeScore=60.4562;InbreedingCoeff=0.0204;MQ=61.36;MQ0=11;MQRankSum=0.491;QD=0.50;ReadPosRankSum=0.657;VQSLOD=1.2315;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:2.99:0,3,24	./.	./.	./.	./.	./.	1/1:27,0:30:2.84:14,3,0	./.	0/0:13,0:13:9.03:0,9,131	0/0:7,0:6:3:0,3,26	./.	0/0:18,0:18:0.93:0,1,142	0/0:14,0:19:9.48:0,9,96	0/0:26,0:26:24.06:0,24,306	0/0:29,0:29:12.02:0,12,156	0/1:10,1:11:25.87:26,0,38	0/0:22,0:21:18.06:0,18,263	0/1:15,2:17:41.80:42,0,130	0/0:14,0:14:12.03:0,12,136	0/0:9,0:9:6.01:0,6,69	0/0:46,0:45:15.04:0,15,196	0/1:18,0:17:19.72:20,0,78	0/0:8,0:8:3.01:0,3,44	0/1:32,0:31:5.70:6,0,261	1/1:12,1:13:5.51:46,6,0	0/1:21,0:21:19.77:20,0,37	1/1:15,0:15:2.37:9,2,0	0/1:7,1:7:25.87:26,0,36
chr10	105939382	.	C	CTTTATTTATTTATTTA	7320.79	PASS	AC=14;AF=0.292;AN=48;BaseQRankSum=2.495;DP=449;FS=8.707;HRun=0;HaplotypeScore=184.6597;InbreedingCoeff=0.9153;MQ=64.44;MQ0=0;MQRankSum=-8.019;QD=58.10;ReadPosRankSum=-4.986;VQSLOD=2.4728;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:51.14:0,51,1798	1/1:6,0:8:6.02:119,6,0	./.	./.	0/0:22,0:22:48.15:0,48,1749	1/1:13,4:20:18.06:1191,18,0	./.	1/1:39,0:37:51.17:1505,51,0	0/0:10,0:10:18.05:0,18,501	0/0:33,0:34:96.33:0,96,3759	0/0:17,0:17:30.09:0,30,1164	0/0:13,0:13:27.09:0,27,1106	0/0:9,0:9:12.04:0,12,363	0/0:6,0:6:6.02:0,6,177	0/0:12,0:12:18.06:0,18,620	0/0:14,0:14:15.05:0,15,396	0/0:31,0:32:57.20:0,57,2215	0/0:27,0:27:51.12:0,51,1684	1/1:24,0:24:42.13:1396,42,0	1/1:5,0:5:6.02:238,6,0	./.	0/0:7,0:7:12.04:0,12,471	0/0:13,0:13:15.05:0,15,660	0/0:13,0:13:24.08:0,24,973	1/1:13,4:17:24.08:1690,24,0	0/0:25,0:25:45.12:0,45,1428	1/1:13,0:13:24.08:1182,24,0	0/0:32,0:32:57.19:0,57,2063
chr10	105941173	.	C	CG	2712.58	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-4.871;DP=602;FS=5.610;HRun=7;HaplotypeScore=66.4163;InbreedingCoeff=0.9187;MQ=89.88;MQ0=0;MQRankSum=-2.737;QD=23.59;ReadPosRankSum=-3.110;VQSLOD=2.5072;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,126,1193	0/0:4,0:4:9.01:0,9,87	0/0:26,0:26:57.06:0,57,540	0/0:26,0:25:33.25:0,33,397	0/0:18,0:18:48.07:0,48,463	0/0:18,0:18:48.05:0,48,453	0/0:20,0:20:33.03:0,33,318	1/1:3,15:18:7.06:351,7,0	0/0:19,0:20:50.11:0,50,469	0/0:18,0:18:45.04:0,45,434	0/0:13,0:13:29.89:0,30,268	0/0:31,0:31:78.11:0,78,751	0/0:15,0:15:42.07:0,42,404	0/0:19,0:19:32.97:0,33,307	0/0:20,0:20:48.07:0,48,463	0/0:21,0:21:57.04:0,57,540	0/0:33,0:33:93.14:0,93,895	0/0:32,0:32:87.13:0,87,840	1/1:10,14:23:54.08:593,54,0	1/1:2,10:12:4.44:320,4,0	1/1:8,31:39:81.21:960,81,0	0/0:15,0:15:33.05:0,33,317	0/0:12,0:12:30.04:0,30,287	0/0:28,0:28:69.11:0,69,665	0/0:19,0:19:33.04:0,33,318	0/0:18,0:18:39.01:0,39,367	1/1:2,20:22:54.17:652,54,0	0/0:5,0:5:9.01:0,9,87
chr10	105941786	.	TA	T	495.27	PASS	AB=0.714;AC=14;AF=0.259;AN=54;BaseQRankSum=4.145;DP=303;FS=17.367;HRun=14;HaplotypeScore=39.8430;InbreedingCoeff=0.4265;MQ=64.31;MQ0=3;MQRankSum=0.832;QD=4.09;ReadPosRankSum=1.497;VQSLOD=-0.1030;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:23.16:0,23,236	0/1:2,1:3:11.57:12,0,47	0/0:13,0:5:5.53:0,6,28	0/0:8,0:3:2.99:0,3,24	0/0:16,0:15:11.92:0,12,97	1/1:5,0:19:14.70:58,15,0	1/1:2,0:13:16.28:47,16,0	1/1:9,16:26:42.11:273,42,0	0/0:5,0:5:12.01:0,12,111	0/0:11,0:12:18.62:0,19,146	0/0:5,1:7:8.85:0,9,70	0/0:3,1:5:11.80:0,12,89	0/0:4,0:4:5.88:0,6,43	0/0:4,0:4:6.01:0,6,56	0/0:15,0:15:24.02:0,24,219	0/0:15,0:15:4.17:0,4,158	0/0:21,4:27:4.23:0,4,447	0/0:14,0:16:22.22:0,22,173	0/1:5,7:13:14.67:69,0,15	./.	0/1:3,4:7:18.90:32,0,19	0/0:1,0:2:2.92:0,3,17	0/0:2,0:2:6.01:0,6,56	0/0:0,1:1:0:0,0,0	1/1:2,0:13:12.20:35,12,0	0/0:14,0:16:12.93:0,13,229	1/1:1,8:9:17.82:123,18,0	0/1:12,2:17:14.68:15,0,172
chr10	105947373	.	C	CTAGG	9414.71	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.888;DP=808;FS=0.746;HRun=0;HaplotypeScore=126.0724;InbreedingCoeff=0.9980;MQ=78.24;MQ0=0;MQRankSum=-4.607;QD=59.97;ReadPosRankSum=-1.517;VQSLOD=6.1839;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:66:99:0,190,3502	0/0:7,0:7:18.06:0,18,336	0/0:16,0:16:42.14:0,42,737	0/0:25,0:25:69.17:0,69,1141	0/0:31,0:31:93.32:0,93,1729	0/0:28,0:27:84.29:0,84,1565	0/0:44,0:44:99:0,126,2312	1/1:11,17:28:78.25:1882,78,0	0/0:31,0:31:78.27:0,78,1442	0/0:25,0:25:66.23:0,66,1216	0/0:11,0:11:33.11:0,33,609	0/0:41,0:41:99:0,120,2169	0/0:40,0:40:99:0,111,1987	0/0:28,0:28:75.24:0,75,1368	0/0:33,0:33:96.33:0,96,1784	0/0:34,0:34:99:0,99,1848	0/0:37,0:37:99:0,108,2016	0/0:22,0:22:66.21:0,66,1200	1/1:7,19:27:69.21:1687,69,0	1/1:1,15:18:51.18:1348,51,0	1/1:12,39:52:95.97:2498,96,0	0/0:28,0:28:78.26:0,78,1425	0/0:11,0:11:33.10:0,33,583	0/0:32,0:32:81.28:0,81,1512	0/0:19,0:19:54.18:0,54,976	0/0:28,0:28:75.25:0,75,1363	1/1:1,29:32:75.26:1999,75,0	0/0:14,0:14:42.14:0,42,784
chr10	105947893	.	AGCCT	A	3453.26	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.781;DP=643;FS=4.871;HRun=0;HaplotypeScore=104.1403;InbreedingCoeff=0.9986;MQ=79.93;MQ0=0;MQRankSum=-1.948;QD=50.05;ReadPosRankSum=1.352;VQSLOD=4.2253;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,2935	0/0:11,0:11:30.10:0,30,826	0/0:18,0:18:54.10:0,54,1341	0/0:15,0:14:32.70:0,33,889	0/0:10,0:10:30.10:0,30,850	1/1:0,24:24:60.21:1256,60,0	1/1:0,27:27:57.20:1192,57,0	0/0:31,0:31:93.31:0,93,2600	0/0:17,0:17:51.18:0,51,1443	0/0:25,0:25:72.25:0,72,2078	0/0:12,0:12:30.10:0,30,865	0/0:33,0:33:99:0,99,2846	0/0:22,0:22:63.22:0,63,1826	0/0:21,0:21:63.22:0,63,1825	0/0:26,0:26:78.27:0,78,2198	0/0:17,0:17:51.18:0,51,1469	0/0:34,0:34:96.31:0,96,2654	0/0:33,0:33:99:0,99,2857	0/0:21,0:21:63.22:0,63,1765	0/0:18,0:18:54.19:0,54,1552	0/0:46,0:46:99:0,135,3817	0/0:28,0:28:84.29:0,84,2434	0/0:16,0:16:48.15:0,48,1314	0/0:26,0:26:78.27:0,78,2216	1/1:0,18:18:48.16:1005,48,0	0/0:31,0:31:93.32:0,93,2681	0/0:19,0:19:57.18:0,57,1589	0/0:8,0:8:24.08:0,24,695
chr10	105949220	.	GCCCCTCA	G	3612.80	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.936;DP=479;FS=6.743;HRun=0;HaplotypeScore=111.9361;InbreedingCoeff=0.9180;MQ=70.98;MQ0=0;MQRankSum=-6.325;QD=28.23;ReadPosRankSum=-2.710;VQSLOD=2.3674;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:66.21:0,66,2072	0/0:5,0:5:6.02:0,6,230	0/0:6,0:6:12.04:0,12,278	0/0:16,0:14:27.47:0,27,548	0/0:9,0:9:20.83:0,21,585	0/0:16,0:16:42.14:0,42,1563	0/0:19,0:19:39.12:0,39,1337	1/1:7,24:31:63.08:1199,63,0	0/0:15,0:15:42.14:0,42,1344	0/0:8,0:8:18.06:0,18,643	0/0:3,0:2:3.01:0,3,114	0/0:23,0:23:57.16:0,57,1804	0/0:21,0:21:51.18:0,51,1857	0/0:19,0:19:45.14:0,45,1328	0/0:23,0:23:59.96:0,60,2182	0/0:20,0:20:54.17:0,54,1561	0/0:25,0:25:69.22:0,69,2383	0/0:24,0:24:63.22:0,63,2170	1/1:7,18:25:54.07:987,54,0	1/1:4,7:11:15.05:327,15,0	1/1:14,32:46:27.84:433,28,0	0/0:13,0:13:27.09:0,27,699	0/0:8,0:8:18.06:0,18,571	0/0:16,0:16:42.14:0,42,1394	0/0:9,0:9:15.05:0,15,449	0/0:14,0:14:36.12:0,36,1176	1/1:4,11:15:29.93:667,30,0	0/0:9,0:9:21.05:0,21,711
chr10	105951490	.	T	TC	2194.77	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-2.009;DP=507;FS=0.508;HRun=0;HaplotypeScore=54.0187;InbreedingCoeff=0.9896;MQ=67.18;MQ0=1;MQRankSum=-0.065;QD=29.66;ReadPosRankSum=3.993;VQSLOD=3.9020;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.22:0,90,1145	1/1:1,8:9:22.26:319,22,0	0/0:21,0:13:36.09:0,36,442	0/0:14,0:12:21.01:0,21,207	0/0:28,0:28:84.20:0,84,1041	1/1:1,23:24:56.62:775,57,0	1/1:1,19:20:42.13:572,42,0	0/0:41,0:41:99:0,111,1430	0/0:9,0:9:27.07:0,27,344	0/0:19,0:19:48.15:0,48,643	0/0:20,0:20:60.16:0,60,763	0/0:13,0:13:33.10:0,33,443	0/0:10,0:10:30.09:0,30,400	0/0:15,0:15:45.08:0,45,556	0/0:22,0:22:66.18:0,66,856	0/0:25,0:25:75.18:0,75,937	0/0:27,0:27:81.22:0,81,1039	0/0:27,0:27:81.22:0,81,1053	0/0:19,0:19:57.17:0,57,748	0/0:12,0:12:33.09:0,33,416	0/0:7,0:7:21.03:0,21,230	0/0:5,0:5:15.04:0,15,194	0/0:7,0:7:21.01:0,21,226	0/0:7,0:7:21.07:0,21,289	1/1:1,20:20:51.17:690,51,0	0/0:20,0:20:60.16:0,60,773	0/0:20,0:19:45.21:0,45,609	0/0:15,0:15:42.12:0,42,551
chr10	105959947	.	G	GC	7129.38	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=17.074;DP=651;FS=11.259;HRun=2;HaplotypeScore=81.0549;InbreedingCoeff=0.9980;MQ=76.72;MQ0=0;MQRankSum=-2.927;QD=32.70;ReadPosRankSum=-1.209;VQSLOD=3.3137;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,1706	1/1:0,7:7:18.06:230,18,0	0/0:11,0:11:21.05:0,21,247	0/0:17,0:16:48.10:0,48,566	0/0:19,0:19:57.18:0,57,704	1/1:0,16:16:45.15:595,45,0	1/1:1,24:25:57.19:752,57,0	1/1:3,21:24:66.19:839,66,0	0/0:31,0:31:93.27:0,93,1135	0/0:31,0:31:81.23:0,81,968	0/0:14,0:14:39.11:0,39,471	0/0:25,0:25:75.22:0,75,914	0/0:22,0:22:66.19:0,66,805	0/0:26,0:26:75.22:0,75,916	0/0:22,0:22:66.19:0,66,795	0/0:24,0:24:69.20:0,69,842	0/0:26,0:26:72.17:0,72,861	0/0:25,0:25:69.22:0,69,855	1/1:2,15:17:48.13:610,48,0	1/1:1,11:12:33.11:437,33,0	1/1:8,73:81:99:2497,192,0	0/0:18,0:18:45.14:0,45,556	0/0:17,0:17:48.15:0,48,590	0/0:22,0:22:63.20:0,63,780	1/1:2,17:18:31.73:541,32,0	0/0:23,0:23:64.74:0,65,774	1/1:0,17:17:48.16:629,48,0	0/0:14,0:14:42.13:0,42,520
chr10	105960636	.	AGAGAGATT	A	3731.16	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=6.105;DP=530;FS=6.211;HRun=0;HaplotypeScore=130.0928;InbreedingCoeff=0.4454;MQ=69.63;MQ0=15;MQRankSum=1.518;QD=23.61;ReadPosRankSum=0.139;VQSLOD=2.6384;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:69.11:0,69,1231	0/1:15,0:15:99:240,0,182	0/0:33,0:20:13.67:0,14,652	0/0:46,0:23:19.06:0,19,605	0/0:20,0:20:39.06:0,39,708	1/1:21,1:22:45.61:760,46,0	1/1:4,9:13:6.05:56,6,0	0/1:35,0:34:97.43:1028,0,97	0/0:11,0:11:27.09:0,27,562	0/0:20,0:20:54.14:0,54,944	0/0:6,0:6:8.94:0,9,94	0/0:13,0:12:33.10:0,33,723	0/0:14,0:14:39.13:0,39,909	0/0:13,0:13:27.04:0,27,646	0/0:22,0:21:51.14:0,51,986	0/0:12,0:12:27.09:0,27,565	0/0:19,0:19:54.15:0,54,1188	0/0:24,0:24:66.20:0,66,1530	0/1:14,0:14:99:286,0,136	1/1:13,0:13:8.99:94,9,0	0/1:15,0:15:90.03:377,0,90	0/0:11,0:11:21.07:0,21,417	0/0:10,0:10:23.89:0,24,435	0/0:19,0:19:42.08:0,42,822	1/1:11,0:11:27.01:437,27,0	0/0:29,0:29:71:0,71,1281	0/1:20,0:20:99:453,0,222	0/0:20,0:19:51.48:0,51,784
chr10	105960642	.	ATT	A	4975.60	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=6.050;DP=483;FS=13.271;HRun=2;HaplotypeScore=72.4321;InbreedingCoeff=0.8098;MQ=79.51;MQ0=14;MQRankSum=0.773;QD=26.90;ReadPosRankSum=-3.294;VQSLOD=2.0333;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:48.12:0,48,762	1/1:12,0:12:28.52:324,29,0	0/0:39,0:25:29.04:0,29,893	0/0:52,0:28:31.41:0,31,831	0/0:15,0:15:42.03:0,42,619	1/1:21,1:22:59.78:844,60,0	1/1:9,1:10:2.99:36,3,0	1/1:3,35:37:99:1387,101,0	0/0:10,0:10:24.04:0,24,380	0/0:16,0:16:36.07:0,36,588	0/0:2,0:2:5.93:0,6,50	0/0:10,0:10:24.08:0,24,422	0/1:15,0:15:5.88:6,0,453	0/0:8,0:8:24.03:0,24,382	0/0:16,0:15:45.15:0,45,794	0/0:9,0:9:18.02:0,18,269	0/0:12,0:12:36.12:0,36,620	0/0:23,0:23:52.56:0,53,837	1/1:19,1:20:51.28:679,51,0	1/1:1,11:12:8.94:94,9,0	1/1:15,0:15:34.67:502,35,0	0/0:8,0:8:21.07:0,21,308	0/1:11,0:11:11:11,0,315	0/0:18,0:18:21.90:0,22,684	1/1:11,1:12:30.41:441,30,0	0/0:23,0:23:66.07:0,66,1088	1/1:18,0:18:44.94:652,45,0	0/0:18,0:17:44.99:0,45,653
chr10	105962009	.	CAG	C	6896.70	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.949;DP=733;FS=2.803;HRun=0;HaplotypeScore=93.6369;InbreedingCoeff=0.9976;MQ=58.85;MQ0=5;MQRankSum=0.800;QD=31.78;ReadPosRankSum=0.018;VQSLOD=6.2172;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,1861	1/1:2,6:8:18.06:241,18,0	0/0:30,0:21:60.16:0,60,983	0/0:39,0:27:75.20:0,75,1199	0/0:13,0:13:29.72:0,30,467	1/1:2,16:19:48.16:649,48,0	1/1:2,25:27:60.20:811,60,0	1/1:3,31:34:90.27:1183,90,0	0/0:33,0:33:93.32:0,93,1617	0/0:21,0:21:63.21:0,63,1073	0/0:12,0:12:33.10:0,33,531	0/0:34,0:34:93.30:0,93,1592	0/0:29,0:29:72.25:0,72,1257	0/0:38,0:38:99:0,105,1825	0/0:34,0:34:96.31:0,96,1654	0/0:30,0:30:81.28:0,81,1420	0/0:28,0:28:78.24:0,78,1330	0/0:40,0:40:99:0,111,1902	1/1:4,12:15:24.08:322,24,0	1/1:1,12:13:33.11:446,33,0	1/1:3,41:44:99:1379,102,0	0/0:18,0:18:54.18:0,54,946	0/0:16,0:16:45.15:0,45,780	0/0:34,0:34:90.29:0,90,1550	1/1:2,20:23:57.19:771,57,0	0/0:20,0:20:45.15:0,45,787	1/1:4,29:32:81.27:1095,81,0	0/0:8,0:8:21.07:0,21,368
chr10	105962063	.	C	CACAT	10514.07	PASS	AB=0.704;AC=32;AF=0.667;AN=48;BaseQRankSum=-7.045;DP=816;FS=3.498;HRun=0;HaplotypeScore=161.0612;InbreedingCoeff=0.3460;MQ=64.51;MQ0=5;MQRankSum=2.373;QD=18.07;ReadPosRankSum=1.143;VQSLOD=4.6152;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:8.56:0,9,339	0/0:9,0:12:12.93:0,13,97	./.	./.	1/1:12,12:24:18.06:418,18,0	1/1:16,0:27:45.15:784,45,0	1/1:28,3:31:24.08:449,24,0	./.	0/1:21,15:39:12.51:663,0,13	1/1:16,16:31:48.16:1007,48,0	1/1:13,10:24:24.07:557,24,0	1/1:15,20:36:42.14:975,42,0	0/1:19,8:28:56.45:327,0,56	1/1:23,0:38:6.02:104,6,0	0/1:22,19:42:18.54:530,0,19	0/1:22,15:39:10.52:663,0,11	1/1:16,14:31:30.10:696,30,0	0/1:21,15:36:9.48:730,0,9	0/0:23,0:24:6.01:0,6,56	0/0:13,0:17:12.01:0,12,112	./.	1/1:12,6:20:12.04:279,12,0	0/1:15,11:26:48.47:327,0,48	1/1:21,9:31:1.13:464,1,0	1/1:33,0:38:35.80:506,36,0	1/1:8,10:20:33.10:619,33,0	0/0:13,0:16:12.01:0,12,112	1/1:2,13:19:18.06:418,18,0
chr10	105962405	.	T	TG	7074.53	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-13.638;DP=582;FS=4.333;HRun=2;HaplotypeScore=55.9738;InbreedingCoeff=0.9989;MQ=80.31;MQ0=0;MQRankSum=-5.597;QD=38.87;ReadPosRankSum=-1.748;VQSLOD=4.7183;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1298	1/1:1,12:13:33.11:474,33,0	0/0:23,0:23:63.16:0,63,747	0/0:27,0:27:72.06:0,72,891	0/0:16,0:16:48.15:0,48,595	1/1:1,13:14:36.12:518,36,0	1/1:1,32:33:90.30:1296,90,0	1/1:1,25:26:75.24:1060,75,0	0/0:23,0:23:66.21:0,66,816	0/0:17,0:17:42.13:0,42,512	0/0:11,0:11:27.08:0,27,335	0/0:17,0:17:48.15:0,48,592	0/0:15,0:15:45.14:0,45,557	0/0:14,0:14:30.23:0,30,425	0/0:25,0:25:75.22:0,75,917	0/0:24,0:24:72.20:0,72,867	0/0:37,0:37:99:0,99,1197	0/0:26,0:26:69.22:0,69,855	1/1:2,20:22:60.20:860,60,0	1/1:2,9:11:29.90:404,30,0	1/1:0,34:34:93.31:1338,93,0	0/0:9,0:9:21.05:0,21,248	0/0:12,0:12:36.10:0,36,434	0/0:22,0:22:66.21:0,66,817	1/1:0,12:11:30.10:432,30,0	0/0:21,0:21:54.17:0,54,668	1/1:0,17:16:48.16:691,48,0	0/0:24,0:24:69.22:0,69,855
chr10	105964883	.	C	CTGTT	1902.73	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=-2.458;DP=310;FS=0.527;HRun=0;HaplotypeScore=49.4056;InbreedingCoeff=0.7366;MQ=68.20;MQ0=0;MQRankSum=-1.134;QD=15.22;ReadPosRankSum=-4.449;VQSLOD=1.9449;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:35.92:0,36,498	1/1:3,0:3:8.93:66,9,0	0/0:10,0:8:12.02:0,12,117	0/0:11,0:8:12:0,12,118	0/1:7,0:7:33.96:38,0,34	1/1:2,10:12:6.02:158,6,0	1/1:6,0:6:11.99:125,12,0	1/1:40,0:40:99:867,102,0	0/0:7,0:7:20.95:0,21,198	0/1:10,0:10:61.52:62,0,144	0/0:3,0:3:8.99:0,9,75	0/0:10,0:10:20.99:0,21,205	0/0:13,0:13:35.81:0,36,426	0/0:8,0:8:23.97:0,24,227	0/0:10,0:10:20.63:0,21,274	0/0:4,0:4:9:0,9,105	0/0:27,0:27:59.96:0,60,775	0/0:20,0:20:53.97:0,54,676	1/1:17,0:17:40.80:338,41,0	1/1:5,0:5:11.99:102,12,0	1/1:7,0:7:1.25:3,1,0	0/0:5,0:5:12:0,12,130	0/0:7,0:7:18:0,18,207	0/0:4,0:4:9.01:0,9,134	1/1:7,0:7:20.86:160,21,0	0/0:14,0:14:35.79:0,36,410	1/1:11,0:11:25.10:184,25,0	0/0:18,0:18:53.97:0,54,589
chr10	105964885	.	G	GTTTGTTTA	2267.70	PASS	AB=0.838;AC=20;AF=0.357;AN=56;BaseQRankSum=-2.535;DP=299;FS=1.089;HRun=0;HaplotypeScore=69.9698;InbreedingCoeff=0.7647;MQ=64.97;MQ0=0;MQRankSum=-2.289;QD=18.59;ReadPosRankSum=-4.061;VQSLOD=1.2722;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:35.04:0,35,699	1/1:3,0:3:8.93:66,9,0	0/0:9,0:7:12.49:0,12,117	0/0:9,0:6:12:0,12,118	0/1:6,0:7:5.99:6,0,35	1/1:11,0:11:6.02:64,6,0	1/1:4,0:4:11.20:80,11,0	1/1:41,0:41:99:1186,111,0	0/0:7,0:7:20.95:0,21,228	0/1:6,0:8:7.40:7,0,144	0/0:3,0:3:8.99:0,9,75	0/0:8,0:8:21:0,21,259	0/0:13,0:13:38.82:0,39,594	0/0:8,0:8:23.97:0,24,257	0/0:10,0:10:20.63:0,21,361	0/0:3,0:3:9:0,9,135	0/0:25,0:25:62.64:0,63,1074	0/0:21,0:21:56.96:0,57,936	1/1:4,12:18:41.77:443,42,0	1/1:5,0:5:11.99:171,12,0	1/1:1,7:8:3.01:33,3,0	0/0:4,0:4:12:0,12,160	0/0:7,0:7:18:0,18,268	0/0:4,0:4:9.01:0,9,193	1/1:7,0:7:20.86:160,21,0	0/0:14,0:14:35.80:0,36,490	1/1:10,0:10:26.87:252,27,0	0/0:18,0:18:53.97:0,54,738
chr10	105965124	.	TGA	T	273.25	PASS	AB=0.967;AC=16;AF=0.320;AN=50;BaseQRankSum=1.209;DP=442;FS=12.513;HRun=0;HaplotypeScore=50.3740;InbreedingCoeff=0.0046;MQ=40.00;MQ0=37;MQRankSum=3.539;QD=1.39;ReadPosRankSum=-0.507;VQSLOD=0.0807;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,4:36:17.89:18,0,135	0/0:3,0:3:3:0,3,26	./.	./.	0/0:7,0:7:3.01:0,3,45	1/1:10,4:13:0.28:28,0,0	1/1:3,3:15:8.86:79,9,0	0/0:20,0:17:15.02:0,15,180	0/0:21,0:18:15.04:0,15,195	0/1:11,1:12:23.99:24,0,27	0/0:8,0:8:3.01:0,3,45	0/1:17,2:18:77.42:77,0,149	0/1:16,0:15:15.65:16,0,204	0/0:12,0:12:9.03:0,9,124	0/1:12,0:11:53.11:53,0,78	0/0:7,0:6:6.01:0,6,71	0/0:26,0:25:22.31:0,22,298	0/0:11,0:11:6.02:0,6,88	0/0:9,0:6:6.02:0,6,83	0/0:7,0:6:0:0,0,0	0/0:9,0:8:5.99:0,6,66	1/1:7,1:8:3.01:33,3,0	./.	0/1:25,0:23:25.86:26,0,111	1/1:8,1:9:3:33,3,0	0/1:16,0:15:4.02:4,0,47	0/0:12,0:13:12:0,12,106	0/1:12,0:9:22.29:22,0,30
chr10	105969282	.	ATTTC	A	80.68	PASS	AB=1.000;AC=4;AF=0.074;AN=54;BaseQRankSum=1.919;DP=407;FS=0.000;HRun=0;HaplotypeScore=82.9865;InbreedingCoeff=0.3272;MQ=70.05;MQ0=1;MQRankSum=-0.863;QD=1.44;ReadPosRankSum=-1.222;VQSLOD=1.4262;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:50.37:0,50,972	./.	0/1:20,0:16:0.70:1,0,67	0/0:10,0:8:2.90:0,3,16	0/0:13,0:13:21.04:0,21,360	0/0:15,0:15:18.53:0,19,356	0/1:17,0:17:16.52:43,0,17	0/0:26,0:24:1.70:0,2,67	0/0:6,0:6:9.03:0,9,193	0/0:13,0:13:24.08:0,24,493	0/0:7,0:7:15.05:0,15,327	0/0:8,0:8:21.07:0,21,404	0/0:14,0:13:27.04:0,27,436	0/0:9,0:9:12.04:0,12,233	0/0:11,0:11:21.07:0,21,419	0/0:11,0:11:26.98:0,27,436	0/0:25,0:25:45.15:0,45,862	1/1:9,10:19:9.03:134,9,0	0/0:17,0:16:17.96:0,18,220	0/0:10,0:10:15:0,15,225	0/0:12,0:12:5.95:0,6,84	0/0:8,0:8:24.06:0,24,434	0/0:10,0:10:12.03:0,12,206	0/0:17,0:17:27.09:0,27,566	0/0:19,0:19:22.78:0,23,304	0/0:20,0:20:42.14:0,42,922	0/0:18,0:18:23.28:0,23,244	0/0:17,0:17:33.05:0,33,476
chr10	105972435	.	GT	G	2628.68	PASS	AB=0.944;AC=20;AF=0.357;AN=56;BaseQRankSum=11.179;DP=591;FS=2.848;HRun=11;HaplotypeScore=65.3673;InbreedingCoeff=0.7928;MQ=68.21;MQ0=14;MQRankSum=0.449;QD=12.23;ReadPosRankSum=-0.805;VQSLOD=3.3035;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:36:80.99:0,81,821	1/1:7,0:7:11.84:43,12,0	0/0:48,0:15:0.49:0,0,145	0/1:40,0:13:6.23:6,0,17	0/0:18,2:20:4.86:0,5,462	1/1:4,11:15:38.96:320,39,0	1/1:5,8:13:23.33:180,23,0	1/1:5,22:27:58.34:472,58,0	0/0:12,0:13:26.12:0,26,298	0/0:20,0:21:53.97:0,54,554	0/0:22,0:22:61.69:0,62,629	0/0:17,0:16:21.85:0,22,289	0/0:11,0:11:21.05:0,21,222	0/0:13,0:13:33.07:0,33,344	0/0:23,2:25:16.88:0,17,577	0/0:20,0:20:17.35:0,17,364	0/0:19,1:23:5.27:0,5,398	0/0:25,0:26:63.98:0,64,658	1/1:4,14:20:16.40:306,16,0	1/1:3,18:21:18.90:355,19,0	1/1:5,17:20:47.54:394,48,0	0/0:14,0:14:6.90:0,7,257	0/0:25,2:27:41.51:0,42,634	0/0:15,0:15:11.56:0,12,318	1/1:0,18:18:50.94:418,51,0	0/0:25,0:25:59.50:0,59,604	1/1:6,16:20:15.94:337,16,0	0/1:7,1:8:0.58:1,0,200
chr10	105972523	.	T	TC	1237.19	PASS	AB=0.714;AC=15;AF=0.268;AN=56;BaseQRankSum=9.293;DP=478;FS=20.897;HRun=9;HaplotypeScore=73.1911;InbreedingCoeff=0.9054;MQ=70.94;MQ0=0;MQRankSum=-1.291;QD=10.31;ReadPosRankSum=-2.434;VQSLOD=0.4280;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:62:0,62,523	0/0:15,0:15:21.88:0,22,74	0/0:22,0:18:21.87:0,22,199	0/0:14,0:12:3.91:0,4,114	0/0:21,0:22:59.01:0,59,497	1/1:9,22:31:28.71:474,29,0	1/1:7,5:13:4.09:256,4,0	1/1:2,1:16:20.04:117,20,0	0/0:11,0:11:14.99:0,15,130	0/0:17,0:17:47.99:0,48,416	0/0:22,0:22:56.97:0,57,492	0/0:11,0:11:26.99:0,27,234	0/0:22,0:22:53.96:0,54,465	0/0:15,0:15:29.83:0,30,259	0/0:15,0:15:38.98:0,39,335	0/0:11,0:11:20.98:0,21,182	0/0:25,0:25:59.94:0,60,516	0/0:18,0:18:44.99:0,45,391	1/1:10,0:12:13.71:71,14,0	1/1:11,0:15:16.98:85,17,0	0/1:3,0:4:0:0,0,0	0/0:23,0:23:56.97:0,57,495	0/0:17,0:17:44.98:0,45,390	0/0:10,0:10:23.99:0,24,208	1/1:7,6:13:26.43:267,26,0	0/0:24,0:24:62.97:0,63,544	1/1:5,0:14:31.13:157,31,0	0/0:16,0:16:41.98:0,42,363
chr10	105973494	.	T	TGAGAGAGAGA	6847.10	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=8.603;DP=427;FS=1.858;HRun=0;HaplotypeScore=139.9802;InbreedingCoeff=0.9390;MQ=63.61;MQ0=8;MQRankSum=-9.197;QD=61.13;ReadPosRankSum=-2.879;VQSLOD=4.1973;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:60.21:0,60,1872	1/1:3,0:3:3.01:149,3,0	0/0:19,0:10:30.10:0,30,906	0/0:23,0:17:42.14:0,42,1284	0/0:14,0:14:42.13:0,42,1323	1/1:9,12:21:18.06:778,18,0	1/1:13,0:13:18.06:650,18,0	1/1:20,0:20:57.20:2512,57,0	0/0:13,0:13:29.79:0,30,995	0/0:19,0:19:51.11:0,51,1539	0/0:17,0:17:45.14:0,45,1400	0/0:13,0:13:33.11:0,33,1070	0/0:14,0:14:38.81:0,39,1211	0/0:18,0:18:45.15:0,45,1469	0/0:20,0:20:48.16:0,48,1517	0/0:16,0:14:45.14:0,45,1393	0/0:19,0:19:54.19:0,54,1741	0/0:20,0:19:57.18:0,57,1668	1/1:9,0:9:26.96:993,27,0	1/1:12,0:12:12.03:419,12,0	1/1:18,0:17:14.66:519,15,0	0/0:9,0:9:21.07:0,21,669	0/0:11,0:11:30.10:0,30,968	0/0:19,0:18:42.14:0,42,1400	1/1:7,0:7:6.02:262,6,0	0/0:16,0:16:45.12:0,45,1216	1/1:9,0:8:12.04:565,12,0	0/0:10,0:10:30.10:0,30,844
chr10	105973498	.	A	AGAGAGAGAGAGGAGAGCC	8699.27	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=6.985;DP=466;FS=0.553;HRun=0;HaplotypeScore=196.1653;InbreedingCoeff=0.8994;MQ=59.61;MQ0=11;MQRankSum=-9.446;QD=79.08;ReadPosRankSum=-3.982;VQSLOD=3.8910;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:31:60.29:0,60,2873	./.	0/0:18,0:9:27.09:0,27,1269	0/0:22,0:16:42.12:0,42,1925	0/0:17,0:17:42.13:0,42,2002	1/1:15,0:17:9.92:494,10,0	1/1:11,0:12:18.07:692,18,0	1/1:30,0:34:88.13:4911,88,0	0/0:13,0:13:29.49:0,29,1538	0/0:20,0:20:51.18:0,51,2366	0/0:18,0:19:45.14:0,45,2162	0/0:19,0:19:36.99:0,37,1650	0/0:15,0:15:38.46:0,38,1820	0/0:22,0:22:45.20:0,45,2056	0/0:18,0:21:48.15:0,48,2306	0/0:17,0:16:48.15:0,48,2134	0/0:20,0:21:54.15:0,54,2678	0/0:22,0:21:57.15:0,57,2609	1/1:5,0:6:10.15:779,10,0	1/1:4,4:8:1.56:198,2,0	1/1:7,3:11:3.48:150,3,0	0/0:8,0:8:21.07:0,21,1008	0/0:12,0:12:30.10:0,30,1405	0/0:26,0:24:25.72:0,26,2220	1/1:3,4:8:8.71:388,9,0	0/0:17,0:17:42.62:0,43,1922	1/1:4,1:7:15.05:1088,15,0	0/0:11,0:11:21.65:0,22,1182
chr10	105973745	.	G	GA	205.44	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-0.418;DP=585;FS=0.000;HRun=9;HaplotypeScore=65.3709;InbreedingCoeff=0.6787;MQ=77.96;MQ0=1;MQRankSum=1.655;QD=4.78;ReadPosRankSum=-0.904;VQSLOD=-0.0054;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:86.69:0,87,733	1/1:2,9:11:27.07:298,27,0	0/1:32,0:23:7.98:8,0,135	0/0:32,0:27:36.62:0,37,414	0/0:24,0:24:50.90:0,51,432	0/0:12,0:12:35.98:0,36,308	0/0:15,0:15:35.93:0,36,305	0/0:23,0:23:59.97:0,60,516	0/0:20,0:20:47.98:0,48,416	0/0:19,0:19:50.98:0,51,441	0/0:15,0:15:32.98:0,33,286	0/0:18,0:18:47.97:0,48,413	0/0:14,0:14:32.97:0,33,283	0/0:15,0:15:35.95:0,36,305	0/0:20,0:20:56.95:0,57,487	0/0:20,0:20:50.94:0,51,436	0/0:37,0:37:99:0,108,918	0/0:25,0:25:68.89:0,69,583	0/0:20,0:23:58.49:0,58,471	0/0:20,0:20:41.98:0,42,364	0/0:15,0:15:31.77:0,32,236	0/0:15,0:15:41.92:0,42,356	0/0:22,0:22:53.81:0,54,452	0/0:24,0:24:55.68:0,56,507	0/0:22,0:22:62.94:0,63,539	0/0:31,0:31:92.95:0,93,801	0/0:19,0:19:47.97:0,48,415	0/0:10,0:10:20.97:0,21,180
chr10	105973881	.	A	AAGAC	5242.84	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=-12.246;DP=735;FS=0.461;HRun=0;HaplotypeScore=124.5495;InbreedingCoeff=0.9862;MQ=70.56;MQ0=4;MQRankSum=1.118;QD=29.62;ReadPosRankSum=-1.547;VQSLOD=4.4253;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:57.18:0,57,854	1/1:0,6:6:15.05:356,15,0	./.	0/0:31,0:30:29.79:0,30,382	0/0:16,0:17:30.10:0,30,451	0/0:11,0:23:27.02:0,27,246	0/0:18,0:37:47.73:0,48,430	1/1:25,0:25:21.05:327,21,0	0/0:19,0:19:30.09:0,30,452	0/0:28,0:28:28.65:0,29,429	0/0:22,0:22:39.12:0,39,590	0/0:17,0:18:42.14:0,42,636	0/0:20,0:20:39.13:0,39,613	0/0:20,0:20:42.14:0,42,660	0/0:26,0:26:45.14:0,45,683	0/0:25,0:25:42.13:0,42,635	0/0:39,0:41:90.24:0,90,1345	0/0:27,0:27:45.09:0,45,658	1/1:22,11:32:30.10:713,30,0	1/1:9,10:19:27.09:641,27,0	1/1:28,40:66:10.86:2242,11,0	0/0:29,0:29:48.14:0,48,710	0/0:20,0:20:28.91:0,29,430	0/0:49,0:49:99:0,108,1588	0/0:2,0:11:26.93:0,27,229	0/0:27,0:26:36.12:0,36,548	1/1:7,17:24:42.14:963,42,0	0/0:17,0:17:33.08:0,33,474
chr10	105975585	.	C	CGAT	3847.68	PASS	AB=0.857;AC=14;AF=0.250;AN=56;BaseQRankSum=9.976;DP=664;FS=6.203;HRun=0;HaplotypeScore=124.9672;InbreedingCoeff=0.7919;MQ=63.23;MQ0=1;MQRankSum=-1.378;QD=20.80;ReadPosRankSum=-2.237;VQSLOD=2.9475;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:45:99:0,105,1356	0/0:7,0:7:12:0,12,142	0/0:16,0:14:8.70:0,9,121	0/0:18,0:16:12.03:0,12,145	0/0:26,0:26:33.11:0,33,446	1/1:15,0:24:27.09:352,27,0	1/1:23,0:26:21.07:300,21,0	0/1:19,0:19:27.65:112,0,28	0/0:24,0:24:60.20:0,60,813	0/0:26,0:26:57.19:0,57,769	0/0:12,0:12:20.72:0,21,284	0/0:22,0:23:57.15:0,57,739	0/0:27,0:27:51.17:0,51,691	0/0:23,0:23:54.18:0,54,731	0/0:38,0:38:69.23:0,69,935	0/0:16,0:17:33.08:0,33,427	0/0:32,0:32:36.09:0,36,884	0/0:24,0:25:56.34:0,56,700	0/1:12,8:20:10.53:464,0,11	1/1:5,4:9:15.05:293,15,0	1/1:13,17:30:48.16:938,48,0	0/0:26,0:27:44.63:0,45,575	0/0:21,0:21:39.09:0,39,528	0/0:29,0:30:21.05:0,21,691	1/1:17,0:27:27.09:352,27,0	0/0:29,0:30:45.11:0,45,589	1/1:12,18:30:38.42:1036,38,0	0/0:12,0:12:27.09:0,27,362
chr10	105975667	.	T	TTTTTC	6281.84	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-3.355;DP=559;FS=7.295;HRun=0;HaplotypeScore=108.8089;InbreedingCoeff=0.9789;MQ=56.88;MQ0=14;MQRankSum=-8.753;QD=39.26;ReadPosRankSum=-2.904;VQSLOD=3.6359;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,129,2114	1/1:2,5:7:9.01:253,9,0	0/0:18,0:10:15.91:0,16,263	0/0:16,0:10:24.30:0,24,216	0/0:9,0:9:23.91:0,24,391	1/1:7,8:13:33.01:750,33,0	1/1:10,4:14:35.55:638,36,0	1/1:10,30:39:9.89:1148,10,0	0/0:16,0:16:42.04:0,42,636	0/0:28,0:26:72.14:0,72,1023	0/0:9,0:9:24.08:0,24,430	0/0:17,0:15:42.10:0,42,738	0/0:18,0:18:47.80:0,48,773	0/0:23,0:22:60.15:0,60,972	0/0:29,0:27:62.68:0,63,1045	0/0:20,0:20:55.42:0,55,999	0/0:34,0:34:86.72:0,87,1410	0/0:31,0:30:79.99:0,80,1244	1/1:20,3:19:36.73:770,37,0	1/1:4,15:19:41.97:895,42,0	1/1:7,3:9:24.06:461,24,0	0/0:12,0:12:32.73:0,33,465	0/0:14,0:14:35.58:0,36,537	0/0:29,0:28:69.11:0,69,1254	1/1:8,3:12:30.07:594,30,0	0/0:18,0:18:50.51:0,51,759	1/1:12,5:16:42.55:773,43,0	0/0:8,0:8:21.07:0,21,402
chr10	105975849	.	TTCTCTCTC	T	898.71	PASS	AC=8;AF=0.160;AN=50;BaseQRankSum=3.082;DP=507;FS=1.626;HRun=0;HaplotypeScore=112.8029;InbreedingCoeff=0.6481;MQ=57.56;MQ0=54;MQRankSum=-1.959;QD=14.50;ReadPosRankSum=-0.335;VQSLOD=2.2177;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:15.05:0,15,443	1/1:7,0:6:6.02:113,6,0	./.	0/0:59,0:25:0.47:0,0,1	0/0:15,0:15:6.02:0,6,188	0/0:15,0:14:12.04:0,12,335	0/0:18,0:15:15.09:0,15,160	0/0:22,0:20:5.98:0,6,47	0/0:13,0:13:18.06:0,18,444	0/0:14,0:14:18.06:0,18,523	0/0:15,0:14:3:0,3,25	0/0:14,0:11:21.07:0,21,488	0/0:15,0:14:24.08:0,24,550	0/0:16,0:15:15.87:0,16,338	0/0:22,0:18:12.04:0,12,333	0/0:8,0:8:6.49:0,6,144	0/0:20,0:18:24.08:0,24,544	0/0:22,0:22:35.23:0,35,763	1/1:17,1:14:12.04:283,12,0	./.	1/1:21,0:17:8.97:91,9,0	0/0:8,0:7:3.01:0,3,100	0/0:10,0:9:3.01:0,3,47	0/0:17,0:13:12.04:0,12,350	./.	0/0:13,0:12:10.28:0,10,192	1/1:9,3:13:11.20:547,11,0	0/0:12,0:10:6.02:0,6,145
chr10	105975897	.	CTGTGTGTGTGTG	C	1078.34	PASS	AC=6;AF=0.120;AN=50;BaseQRankSum=4.332;DP=452;FS=0.000;HRun=0;HaplotypeScore=120.6441;InbreedingCoeff=0.5765;MQ=40.64;MQ0=59;MQRankSum=-3.923;QD=15.19;ReadPosRankSum=1.265;VQSLOD=2.4393;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:28:24.08:0,24,1056	0/0:2,0:2:3.01:0,3,106	./.	./.	0/0:11,0:10:3.01:0,3,133	0/0:16,0:13:15.05:0,15,718	0/0:36,0:28:9.62:0,10,256	0/0:13,0:11:0:0,0,0	0/0:18,0:18:18.53:0,19,632	0/0:16,0:15:18.06:0,18,643	0/0:5,0:6:3.01:0,3,128	0/0:20,0:16:12.04:0,12,395	0/0:21,0:18:22.89:0,23,725	0/0:17,0:13:12.91:0,13,415	0/0:18,0:13:6.49:0,6,209	0/0:15,0:15:18.53:0,19,805	0/0:23,0:17:30.07:0,30,1121	0/0:23,0:21:27.09:0,27,1135	1/1:15,5:14:15.05:484,15,0	./.	1/1:21,0:16:2.18:22,2,0	0/0:7,0:7:6.02:0,6,248	0/0:10,0:8:3.01:0,3,150	0/0:26,0:20:21.07:0,21,875	0/0:8,0:6:3.01:0,3,149	0/0:17,0:14:30.06:0,30,806	1/1:18,7:23:21.03:694,21,0	0/0:14,0:12:21.07:0,21,761
chr10	105976194	.	T	TA	1526.45	PASS	AB=0.744;AC=17;AF=0.304;AN=56;BaseQRankSum=-3.380;DP=340;FS=0.000;HRun=11;HaplotypeScore=36.3965;InbreedingCoeff=0.6535;MQ=59.87;MQ0=9;MQRankSum=-0.540;QD=12.02;ReadPosRankSum=-1.990;VQSLOD=1.8731;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:77.57:0,78,592	1/1:1,3:4:6.01:61,6,0	0/0:13,0:3:7.97:0,8,47	0/1:8,0:4:5.23:5,0,39	0/0:11,0:11:26.86:0,27,205	1/1:2,0:12:28.41:143,28,0	1/1:3,0:11:22.73:114,23,0	1/1:7,19:23:54.05:527,54,0	0/0:9,0:9:20.91:0,21,162	0/0:11,0:11:29.87:0,30,230	0/0:11,0:11:29.88:0,30,232	0/0:7,0:7:14.88:0,15,110	0/0:6,0:6:14.92:0,15,113	0/0:11,0:11:17.89:0,18,137	0/0:5,0:5:14.94:0,15,114	0/0:3,0:3:8.97:0,9,70	0/0:18,0:19:52.84:0,53,400	0/0:17,0:16:40.83:0,41,303	0/1:8,11:17:31.44:238,0,31	1/1:2,11:13:6.83:250,7,0	1/1:1,9:10:12.50:123,12,0	0/0:3,0:3:2.98:0,3,21	0/0:7,0:7:17.87:0,18,133	0/0:18,0:18:41.74:0,42,315	1/1:3,0:6:5.81:34,6,0	0/0:19,0:19:50.74:0,51,390	0/1:6,12:18:13.51:218,0,14	0/0:13,0:13:26.85:0,27,209
chr10	105976416	.	A	ACC	1475.92	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-4.425;DP=395;FS=9.043;HRun=8;HaplotypeScore=53.3578;InbreedingCoeff=0.8619;MQ=74.70;MQ0=8;MQRankSum=1.088;QD=18.00;ReadPosRankSum=-1.475;VQSLOD=0.5042;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:54.10:0,54,599	1/1:1,0:1:3.01:42,3,0	0/0:44,0:21:28.99:0,29,322	0/0:33,0:16:28.66:0,29,217	0/0:17,0:17:36.07:0,36,400	1/1:4,0:4:9.02:108,9,0	1/1:4,7:11:12.03:170,12,0	1/1:2,5:6:12.02:165,12,0	0/0:10,0:10:24.06:0,24,267	0/0:9,0:8:18.04:0,18,200	0/0:6,0:6:12.03:0,12,133	0/0:9,0:9:21.04:0,21,234	0/0:16,0:16:48.13:0,48,534	0/0:7,0:7:18.04:0,18,200	0/0:10,0:10:24.06:0,24,267	0/0:9,0:9:27.07:0,27,301	0/0:32,0:29:72.17:0,72,790	0/0:27,0:29:60.06:0,60,711	1/1:2,6:8:15.02:212,15,0	1/1:1,5:6:12.04:174,12,0	1/1:6,13:18:27.09:418,27,0	0/0:11,0:11:33.02:0,33,351	0/0:16,0:16:45.12:0,45,501	0/0:16,0:16:36.06:0,36,390	1/1:5,0:5:6.02:95,6,0	0/0:14,0:14:36.09:0,36,391	1/1:1,10:11:17.93:286,18,0	0/1:9,0:9:3.73:4,0,149
chr10	105977190	.	G	GAA	4036.07	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-8.076;DP=537;FS=21.704;HRun=9;HaplotypeScore=65.4520;InbreedingCoeff=0.9827;MQ=68.90;MQ0=4;MQRankSum=-0.932;QD=28.42;ReadPosRankSum=-3.390;VQSLOD=1.2556;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:43:99:0,105,1172	1/1:0,0:7:12.48:43,12,0	0/0:32,0:18:40.05:0,40,394	0/0:24,0:15:32.26:0,32,302	0/0:15,0:16:36.04:0,36,438	1/1:2,14:16:36.12:554,36,0	1/1:1,12:14:29.81:444,30,0	1/1:7,14:23:50.50:688,51,0	0/0:14,0:14:39.09:0,39,414	0/0:23,0:22:34.99:0,35,576	0/0:12,0:12:8.74:0,9,295	0/0:13,0:13:36.09:0,36,382	0/0:10,0:10:27.07:0,27,287	0/0:14,0:15:38.82:0,39,387	0/0:18,0:18:45.07:0,45,460	0/0:19,0:19:54.13:0,54,574	0/0:37,0:37:93.18:0,93,989	0/0:32,0:32:87.13:0,87,900	1/1:3,11:13:33.04:447,33,0	1/1:1,9:10:27.02:385,27,0	1/1:2,18:19:42.14:647,42,0	0/0:16,0:16:48.12:0,48,509	0/0:14,0:14:30.02:0,30,369	0/0:22,0:22:54.10:0,54,566	1/1:3,16:21:35.61:517,36,0	0/0:30,0:30:74.89:0,75,778	1/1:1,12:17:28.04:311,28,0	0/0:5,0:5:15.04:0,15,159
chr10	105978568	.	T	TCA	333.69	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=2.115;DP=1295;FS=8.495;HRun=0;HaplotypeScore=198.8526;InbreedingCoeff=0.5409;MQ=56.86;MQ0=25;MQRankSum=0.768;QD=4.84;ReadPosRankSum=-1.799;VQSLOD=1.8761;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,135,1790	1/1:2,13:16:26.83:421,27,0	0/0:64,0:20:44.80:0,45,502	0/0:65,0:18:38.28:0,38,401	0/0:25,0:24:63.17:0,63,829	0/0:18,0:17:47.64:0,48,337	0/0:41,0:36:69.24:0,69,605	0/1:24,0:10:0.40:0,0,105	0/0:57,0:57:99:0,159,2128	0/0:56,0:56:99:0,157,2130	0/0:12,0:12:36.12:0,36,494	0/0:75,0:75:99:0,208,2710	0/0:65,0:65:99:0,165,2156	0/0:61,0:61:99:0,144,1959	0/0:80,0:79:99:0,220,2974	0/0:72,0:72:99:0,199,2684	0/0:35,0:35:99:0,99,1328	0/0:31,0:31:80.46:0,80,1102	0/0:13,0:12:35.45:0,35,234	0/0:15,0:15:23.72:0,24,184	0/0:146,1:137:99:0,268,1991	0/0:45,0:45:99:0,126,1712	0/0:22,0:22:57.15:0,57,734	0/0:62,0:64:99:0,168,2262	0/0:22,0:22:50.53:0,51,350	0/0:50,0:49:99:0,129,1754	0/1:29,0:29:16.37:16,0,403	0/0:36,0:36:96.32:0,96,1315
chr10	105978997	.	ATATG	A	607.77	PASS	AB=0.851;AC=6;AF=0.107;AN=56;BaseQRankSum=11.357;DP=1047;FS=0.000;HRun=0;HaplotypeScore=242.1089;InbreedingCoeff=-0.1230;MQ=75.53;MQ0=2;MQRankSum=-10.019;QD=2.94;ReadPosRankSum=0.880;VQSLOD=2.2310;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,156,4247	0/1:26,7:33:99:188,0,1842	0/0:23,0:24:63.43:0,63,1712	0/0:26,0:26:45.12:0,45,1155	0/0:14,0:14:42.14:0,42,1198	0/1:23,3:25:30.76:31,0,1436	0/1:51,4:55:23.09:23,0,2874	0/0:32,1:33:47.14:0,47,2292	0/0:32,0:32:96.30:0,96,2650	0/0:62,0:62:99:0,184,5136	0/0:25,0:25:75.26:0,75,2128	0/0:58,0:58:99:0,175,4881	0/0:53,0:53:99:0,157,4365	0/0:43,0:43:99:0,129,3646	0/0:50,0:50:99:0,151,4307	0/0:45,0:45:99:0,135,3760	0/0:26,0:26:75.23:0,75,2061	0/0:21,0:21:63.07:0,63,1570	0/1:27,3:30:72.62:73,0,2014	0/1:12,7:19:99:225,0,299	0/0:59,3:61:98.54:0,99,3590	0/0:43,0:43:99:0,129,3649	0/0:24,0:24:69.24:0,69,1994	0/0:51,0:51:99:0,147,3987	0/1:34,10:44:99:193,0,2195	0/0:33,0:33:99:0,99,2714	0/0:39,5:44:7.95:0,8,2438	0/0:17,0:17:51.18:0,51,1475
chr10	105979020	.	CTCAT	C	2153.05	PASS	AB=0.808;AC=8;AF=0.143;AN=56;BaseQRankSum=14.868;DP=1076;FS=0.000;HRun=0;HaplotypeScore=264.5348;InbreedingCoeff=-0.1770;MQ=81.26;MQ0=1;MQRankSum=-13.761;QD=7.18;ReadPosRankSum=3.095;VQSLOD=2.0607;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,4007	0/1:22,12:34:99:418,0,1633	0/0:39,0:38:99:0,113,2743	0/0:34,0:34:94.52:0,95,2358	0/0:19,0:19:57.18:0,57,1561	0/1:24,8:32:99:265,0,1549	0/1:46,7:53:99:146,0,2735	0/1:30,5:35:78.20:78,0,2299	0/0:35,0:35:99:0,105,2977	0/0:57,0:57:99:0,172,4760	0/0:26,0:26:78.26:0,78,2196	0/0:54,0:54:99:0,163,4421	0/0:53,0:53:99:0,160,4371	0/0:46,0:46:99:0,138,3776	0/0:54,0:54:99:0,163,4464	0/0:40,0:40:99:0,120,3260	0/0:36,0:36:99:0,108,3072	0/0:26,0:26:61.45:0,61,1999	0/1:20,2:22:49.08:49,0,1492	0/1:16,12:28:99:438,0,1074	0/0:36,3:38:1.36:0,1,2064	0/0:43,0:43:99:0,129,3598	0/0:23,0:23:69.21:0,69,1837	0/0:49,0:49:99:0,147,4165	0/1:30,17:47:99:598,0,2095	0/0:40,0:40:99:0,120,3338	0/1:38,11:49:99:296,0,2612	0/0:15,0:15:45.15:0,45,1304
chr10	105979921	.	CAGAGAGAGAGAGAGAG	C	916.51	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=4.608;DP=687;FS=2.014;HRun=0;HaplotypeScore=275.9488;InbreedingCoeff=0.7216;MQ=64.90;MQ0=5;MQRankSum=-2.625;QD=7.57;ReadPosRankSum=-0.690;VQSLOD=2.2739;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:49:73.47:0,73,3924	0/1:7,0:7:8.77:62,0,9	0/0:29,0:21:3.01:0,3,33	./.	0/0:25,0:26:36.12:0,36,1670	0/0:13,0:18:30.02:0,30,833	0/0:16,0:24:24.08:0,24,652	1/1:22,0:21:3:27,3,0	0/0:18,0:19:36.11:0,36,1482	0/0:34,0:33:66.22:0,66,2573	0/0:12,0:12:3.01:0,3,156	0/0:23,0:25:39.13:0,39,2094	0/0:27,0:27:48.16:0,48,2461	0/0:22,0:24:33.56:0,34,1276	0/0:17,0:23:21.07:0,21,1146	0/0:20,0:21:30.10:0,30,1640	0/0:43,0:44:74.06:0,74,3622	0/0:14,0:19:36.12:0,36,2022	1/1:10,8:17:20.14:379,20,0	1/1:12,10:22:8.64:102,9,0	1/1:32,0:32:3:30,3,0	0/0:21,0:22:42.14:0,42,2161	0/0:18,0:18:24.08:0,24,1001	0/0:37,0:39:74.99:0,75,4436	0/0:16,0:16:18.06:0,18,594	0/0:25,0:24:33.11:0,33,1455	1/1:12,8:19:12.68:470,13,0	0/0:19,0:19:33.11:0,33,1440
chr10	105980193	.	T	TTTG	6190.48	PASS	AB=0.625;AC=15;AF=0.268;AN=56;BaseQRankSum=-12.086;DP=774;FS=3.559;HRun=0;HaplotypeScore=102.7724;InbreedingCoeff=0.7266;MQ=60.77;MQ0=3;MQRankSum=1.514;QD=25.90;ReadPosRankSum=-0.436;VQSLOD=4.8968;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:57.19:0,57,786	1/1:2,3:6:6.02:119,6,0	0/0:24,0:15:11.84:0,12,114	0/0:37,0:22:5.11:0,5,67	0/0:24,0:24:51.16:0,51,688	0/1:5,13:18:17.15:393,0,17	1/1:13,27:42:30.25:1113,30,0	1/1:20,10:31:35.94:564,36,0	0/0:34,0:33:75.20:0,75,1001	0/0:35,0:35:66.12:0,66,842	0/0:19,0:19:36.08:0,36,499	0/0:25,0:25:54.17:0,54,732	0/0:23,0:23:42.06:0,42,526	0/0:19,0:19:36.12:0,36,499	0/0:34,0:34:54.18:0,54,749	0/0:30,0:30:51.12:0,51,670	0/0:37,0:37:72.20:0,72,947	0/0:29,0:29:54.18:0,54,749	0/1:9,13:22:2.49:606,0,2	1/1:8,15:23:45.07:763,45,0	1/1:19,34:53:72.25:1426,72,0	0/0:23,0:23:45.07:0,45,551	0/0:16,0:17:24.04:0,24,298	0/0:45,0:45:70.74:0,71,1259	0/1:9,9:18:12.45:431,0,12	0/0:34,0:34:66.19:0,66,870	1/1:7,17:24:39.13:775,39,0	0/0:19,0:19:51.16:0,51,690
chr10	105980371	.	AAC	A	319.89	PASS	AB=0.925;AC=15;AF=0.288;AN=52;BaseQRankSum=4.011;DP=586;FS=3.538;HRun=0;HaplotypeScore=80.5114;InbreedingCoeff=-0.1250;MQ=53.42;MQ0=64;MQRankSum=0.766;QD=1.16;ReadPosRankSum=-2.028;VQSLOD=0.9804;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,3:23:19.10:19,0,58	0/0:7,0:6:10.35:0,10,79	./.	./.	0/1:11,1:12:26.60:27,0,39	1/1:18,0:13:13.95:65,14,0	1/1:34,0:23:8.42:49,8,0	0/0:10,0:6:3.01:0,3,36	0/0:19,0:19:20.10:0,20,262	0/0:18,0:17:1.63:0,2,221	0/1:15,1:16:18.94:27,0,19	0/1:17,1:18:11.33:11,0,174	0/0:18,0:17:15.05:0,15,197	0/1:17,0:15:12.51:13,0,134	0/0:17,0:17:27.06:0,27,350	0/1:30,0:30:57.35:57,0,490	0/1:19,6:25:99:126,0,131	0/1:18,2:21:49.07:49,0,230	0/0:15,0:8:8.92:0,9,64	0/0:22,0:19:13.61:0,14,97	0/0:54,0:31:7.74:0,8,190	0/1:20,2:22:9:9,0,208	0/0:16,0:17:0.82:0,1,114	0/0:31,1:32:0.46:0,0,369	0/1:16,0:8:0.32:0,0,58	0/1:18,3:21:14.59:15,0,142	0/0:12,0:10:13.81:0,14,116	0/0:9,0:9:12.01:0,12,152
chr10	105980372	.	A	AC	1824.39	PASS	AB=0.889;AC=17;AF=0.304;AN=56;BaseQRankSum=2.242;DP=584;FS=14.081;HRun=1;HaplotypeScore=70.5342;InbreedingCoeff=0.9011;MQ=53.19;MQ0=65;MQRankSum=-1.260;QD=9.70;ReadPosRankSum=-1.216;VQSLOD=-0.2369;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:54.12:0,54,662	0/1:7,1:6:17.14:62,0,17	0/0:29,0:12:29.88:0,30,356	0/0:28,0:11:24.49:0,24,271	0/0:12,0:12:24.02:0,24,278	1/1:16,2:13:12.53:126,13,0	1/1:33,2:24:15.43:109,15,0	1/1:3,7:6:18.01:219,18,0	0/0:18,0:18:48.15:0,48,608	0/0:19,0:18:45.10:0,45,547	0/0:16,0:16:33.04:0,33,401	0/0:18,0:18:45.09:0,45,543	0/0:18,0:17:48.15:0,48,615	0/0:17,0:15:44.93:0,45,549	0/0:16,0:16:42.11:0,42,524	0/0:28,0:28:77.68:0,78,907	0/0:25,0:25:65.33:0,65,733	0/0:21,0:21:50.40:0,50,573	1/1:10,5:8:21.06:274,21,0	1/1:16,3:16:26.49:314,26,0	1/1:36,20:31:46.70:575,47,0	0/0:22,0:22:42.08:0,42,518	0/0:18,0:17:39.03:0,39,465	0/0:34,0:33:84.22:0,84,1057	1/1:5,10:7:14.54:184,15,0	0/0:21,0:21:57.13:0,57,705	1/1:3,9:10:14.93:167,15,0	0/0:9,0:9:24.08:0,24,306
chr10	105980373	.	CACA	C	1121.43	PASS	AB=0.739;AC=10;AF=0.179;AN=56;BaseQRankSum=2.731;DP=581;FS=19.790;HRun=0;HaplotypeScore=84.5229;InbreedingCoeff=0.2899;MQ=53.21;MQ0=65;MQRankSum=-1.609;QD=6.23;ReadPosRankSum=-1.623;VQSLOD=0.3960;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:54.04:0,54,779	0/0:6,0:6:14.33:0,14,155	0/0:28,0:12:30.52:0,31,357	0/0:26,0:10:24.05:0,24,275	0/0:12,0:12:23.94:0,24,310	1/1:3,9:13:17.89:256,18,0	1/1:3,19:23:14.94:222,15,0	0/1:8,0:6:33.09:182,0,33	0/0:18,0:18:51.17:0,51,902	0/0:18,0:17:48.16:0,48,872	0/0:17,0:17:32.97:0,33,439	0/0:18,0:18:48.03:0,48,806	0/0:18,0:17:48.16:0,48,796	0/0:18,0:15:45.06:0,45,735	0/0:15,0:15:42.14:0,42,867	0/0:28,0:28:77.92:0,78,1409	0/0:25,0:25:68.67:0,69,944	0/0:21,0:21:51.43:0,51,924	0/1:8,0:8:26.53:127,0,27	0/1:6,0:16:85.68:113,0,86	0/1:33,2:31:99:333,0,237	0/0:22,0:22:44.60:0,45,780	0/0:18,0:17:30.58:0,31,568	0/0:34,0:33:87.15:0,87,1481	0/1:11,0:8:38.50:39,0,62	0/0:20,0:20:57.94:0,58,882	0/1:10,0:10:0.32:0,0,122	0/0:9,0:9:24.55:0,25,446
chr10	105980484	.	C	CTTCA	10022.41	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-1.110;DP=622;FS=0.367;HRun=0;HaplotypeScore=104.2225;InbreedingCoeff=0.9946;MQ=83.87;MQ0=0;MQRankSum=-8.848;QD=63.43;ReadPosRankSum=0.731;VQSLOD=6.8832;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,2289	1/1:1,4:6:15.05:414,15,0	0/0:18,0:18:51.13:0,51,931	0/0:25,0:25:62.82:0,63,1108	0/0:15,0:15:45.15:0,45,898	1/1:1,13:17:36.12:1004,36,0	1/1:0,11:14:33.11:903,33,0	1/1:0,10:9:27.09:674,27,0	0/0:23,0:22:60.19:0,60,1139	0/0:21,0:21:63.21:0,63,1223	0/0:9,0:9:27.08:0,27,473	0/0:22,0:22:60.19:0,60,1127	0/0:28,0:28:81.28:0,81,1591	0/0:28,0:28:75.24:0,75,1359	0/0:37,0:36:99:0,108,2058	0/0:25,0:25:69.23:0,69,1332	0/0:47,0:47:99:0,138,2690	0/0:20,0:20:54.12:0,54,987	1/1:1,7:14:39.05:763,39,0	1/1:0,14:14:42.14:1145,42,0	1/1:3,44:50:99:3199,117,0	0/0:16,0:16:48.16:0,48,958	0/0:18,0:18:54.19:0,54,1069	0/0:36,0:36:99:0,108,2017	1/1:1,7:11:18.06:501,18,0	0/0:29,0:29:84.28:0,84,1646	1/1:1,19:22:51:1420,51,0	0/0:6,0:6:18.06:0,18,359
chr10	105980670	.	AAAAAG	A	2695.49	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.425;DP=589;FS=10.680;HRun=0;HaplotypeScore=104.1691;InbreedingCoeff=0.9218;MQ=54.30;MQ0=16;MQRankSum=-5.908;QD=16.04;ReadPosRankSum=-0.895;VQSLOD=2.4834;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,132,3366	1/1:2,0:2:1.25:4,1,0	0/0:14,0:4:9.91:0,10,142	0/0:17,0:5:4.25:0,4,13	0/0:18,0:18:39.10:0,39,884	1/1:6,18:23:10.45:609,10,0	1/1:3,19:21:36.08:632,36,0	1/1:24,0:22:27.78:271,28,0	0/0:20,0:20:39.13:0,39,935	0/0:26,0:26:60.18:0,60,1457	0/0:10,0:10:23.97:0,24,512	0/0:18,0:18:20.90:0,21,516	0/0:11,0:11:20.86:0,21,363	0/0:20,0:19:30.09:0,30,802	0/0:26,0:26:54.12:0,54,1279	0/0:27,0:27:51.07:0,51,1331	0/0:36,0:36:99:0,99,2458	0/0:20,0:19:42.14:0,42,1029	1/1:26,0:23:48.54:367,49,0	1/1:13,0:13:17.29:149,17,0	1/1:10,0:9:8.92:72,9,0	0/0:21,0:21:30.07:0,30,695	0/0:16,0:15:39.13:0,39,1041	0/0:18,0:17:36.10:0,36,888	1/1:8,15:21:29.97:450,30,0	0/0:38,0:36:66.17:0,66,1483	1/1:23,1:23:36.46:343,36,0	0/0:15,0:15:39.08:0,39,931
chr10	105980673	.	AAG	A	528.45	PASS	AB=0.979;AC=9;AF=0.161;AN=56;BaseQRankSum=9.144;DP=597;FS=3.130;HRun=0;HaplotypeScore=83.3291;InbreedingCoeff=-0.0547;MQ=54.69;MQ0=13;MQRankSum=-5.898;QD=3.43;ReadPosRankSum=-2.102;VQSLOD=1.9324;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,141,2251	1/1:2,0:2:1.03:3,1,0	0/0:18,0:6:15.80:0,16,131	0/0:20,0:6:1.59:0,2,16	0/0:18,0:18:44.99:0,45,668	0/1:23,0:22:91.81:173,0,92	0/1:22,0:21:37.25:159,0,37	0/1:21,3:23:99:127,0,229	0/0:19,0:19:50.81:0,51,664	0/0:23,0:23:69.21:0,69,1066	0/0:10,0:10:29.45:0,29,403	0/0:18,0:18:44.94:0,45,601	0/0:11,0:11:26.95:0,27,411	0/0:21,0:20:48.05:0,48,662	0/0:27,0:27:71.87:0,72,1021	0/0:26,0:26:69.20:0,69,1055	0/0:38,0:38:99:0,99,1684	0/0:20,0:19:56.13:0,56,755	0/1:27,0:25:31.33:31,0,261	0/0:15,0:15:9.58:0,10,173	0/1:9,0:9:4.32:4,0,89	0/0:20,0:20:48.15:0,48,697	0/0:18,0:17:45.14:0,45,722	0/0:18,0:17:44.66:0,45,672	0/1:21,0:19:28.49:139,0,28	0/0:37,0:35:99:0,105,1516	0/1:25,1:25:20:20,0,225	0/0:16,0:16:48.09:0,48,703
chr10	105980686	.	AAAAG	A	4260.47	PASS	AB=0.991;AC=16;AF=0.286;AN=56;BaseQRankSum=8.366;DP=620;FS=10.115;HRun=0;HaplotypeScore=102.5668;InbreedingCoeff=0.6605;MQ=60.47;MQ0=7;MQRankSum=-4.661;QD=20.78;ReadPosRankSum=-1.028;VQSLOD=3.4922;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,129,3089	1/1:3,0:3:8.92:68,9,0	0/1:27,0:13:4.61:5,0,243	0/0:25,0:9:18.21:0,18,133	0/0:22,0:22:63.03:0,63,996	0/1:25,1:26:65.78:357,0,66	0/1:21,0:21:9.43:317,0,9	1/1:26,2:28:76.05:902,76,0	0/0:18,0:18:48.10:0,48,955	0/0:27,0:27:75.12:0,75,1417	0/0:10,0:10:29.90:0,30,511	0/0:13,0:13:29.82:0,30,548	0/0:12,0:12:29.89:0,30,407	0/0:21,0:20:45.07:0,45,853	0/0:24,0:24:69.10:0,69,1363	0/0:25,0:25:63.05:0,63,1288	0/0:41,0:41:99:0,111,2290	0/0:18,0:17:51.11:0,51,1010	1/1:5,23:28:60.73:940,61,0	1/1:1,12:13:29.43:452,29,0	1/1:1,8:9:11.96:183,12,0	0/0:19,0:19:38.08:0,38,685	0/0:21,0:20:51.09:0,51,1017	0/0:18,0:18:48.08:0,48,903	0/1:21,0:21:99:185,0,106	0/0:31,0:30:75.21:0,75,1463	1/1:19,10:28:61.37:852,61,0	0/0:19,0:19:57.04:0,57,1041
chr10	105980687	.	AAAG	A	2613.92	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=12.936;DP=625;FS=9.363;HRun=0;HaplotypeScore=97.9006;InbreedingCoeff=0.6549;MQ=61.30;MQ0=7;MQRankSum=-2.283;QD=12.63;ReadPosRankSum=-0.575;VQSLOD=2.5299;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:51:99:0,132,2604	1/1:3,0:3:8.66:78,9,0	0/1:27,0:13:3.13:3,0,247	0/0:26,0:10:18.36:0,18,163	0/0:23,0:23:66.15:0,66,942	0/1:26,0:26:99:252,0,103	0/1:21,0:21:25.79:251,0,26	1/1:28,2:30:59.52:487,60,0	0/0:19,0:19:51.15:0,51,857	0/0:27,0:27:75.19:0,75,1222	0/0:10,0:10:26.97:0,27,429	0/0:13,0:13:29.85:0,30,487	0/0:13,0:13:32.90:0,33,400	0/0:22,0:21:48.12:0,48,781	0/0:24,0:24:69.15:0,69,1196	0/0:25,0:25:63.09:0,63,1105	0/0:40,0:40:99:0,111,1934	0/0:19,0:18:54.14:0,54,888	1/1:25,3:28:51.11:650,51,0	1/1:13,0:13:26.63:233,27,0	1/1:9,0:9:11.96:117,12,0	0/0:17,0:17:38.83:0,39,599	0/0:21,0:20:51.11:0,51,872	0/0:17,0:17:47.72:0,48,785	0/1:21,0:21:99:140,0,155	0/0:32,0:31:84.11:0,84,1321	1/1:27,2:28:58.01:593,58,0	0/0:19,0:19:57.09:0,57,928
chr10	105980690	.	G	GA	1151.70	PASS	AB=0.912;AC=14;AF=0.250;AN=56;BaseQRankSum=1.743;DP=625;FS=11.238;HRun=11;HaplotypeScore=87.3350;InbreedingCoeff=0.7337;MQ=62.38;MQ0=6;MQRankSum=1.942;QD=7.20;ReadPosRankSum=-4.758;VQSLOD=0.2069;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,107,933	1/1:3,1:4:3.70:50,4,0	0/0:23,0:13:6.34:0,6,109	0/0:28,1:13:18.81:0,19,158	0/1:21,2:23:1.13:1,0,356	0/0:24,1:25:20.98:0,21,264	0/0:22,0:22:39.72:0,40,215	1/1:19,15:34:25.32:584,25,0	0/1:17,2:19:13.08:13,0,277	0/0:25,0:25:56.74:0,57,440	0/0:10,0:10:23.89:0,24,186	0/0:13,0:13:29.88:0,30,232	0/0:12,0:13:22.95:0,23,168	0/0:21,0:20:41.80:0,42,325	0/0:24,0:24:59.74:0,60,464	0/0:25,0:25:62.72:0,63,482	0/0:37,0:38:94.63:0,95,724	0/0:18,0:18:46.84:0,47,354	1/1:29,0:29:8.86:338,9,0	1/1:13,0:13:17.38:154,17,0	1/1:10,0:10:3.54:31,4,0	0/0:15,0:16:31.92:0,32,238	0/0:23,0:22:44.76:0,45,348	0/0:16,0:17:40.45:0,40,307	0/0:21,0:21:46.64:0,47,302	0/0:27,3:29:7.86:0,8,427	1/1:25,3:27:12.82:150,13,0	0/0:18,0:18:53.76:0,54,412
chr10	105982982	.	ACCTT	A	3120.68	PASS	AB=0.789;AC=19;AF=0.365;AN=52;BaseQRankSum=9.861;DP=682;FS=0.000;HRun=0;HaplotypeScore=113.5379;InbreedingCoeff=0.8612;MQ=60.27;MQ0=11;MQRankSum=0.501;QD=13.93;ReadPosRankSum=0.526;VQSLOD=3.0495;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:69.24:0,69,1513	0/0:10,0:10:11.99:0,12,212	./.	./.	0/0:17,0:30:45.14:0,45,785	0/1:11,4:14:12.24:41,0,12	1/1:21,12:33:18.06:280,18,0	1/1:19,0:19:6:68,6,0	0/0:23,0:23:36.12:0,36,825	0/0:32,0:32:54.18:0,54,1188	0/0:18,0:18:27.09:0,27,612	0/0:27,0:27:51.18:0,51,1196	1/1:10,9:19:23.94:372,24,0	1/1:12,28:41:57.19:885,57,0	0/0:29,0:29:63.19:0,63,1355	0/0:28,1:29:25.61:0,26,1408	0/0:24,0:24:42.11:0,42,915	0/0:23,0:23:33.11:0,33,772	1/1:16,1:16:3.01:47,3,0	1/1:7,12:19:30.10:466,30,0	1/1:9,12:21:21.07:326,21,0	0/0:20,0:20:24.08:0,24,547	0/0:22,0:22:45.14:0,45,981	0/0:45,1:46:10.59:0,11,1143	1/1:11,11:21:27.09:419,27,0	0/0:26,0:26:48.15:0,48,968	1/1:6,12:18:26.92:417,27,0	0/0:21,0:21:30.02:0,30,475
chr10	105985057	.	G	GCT	257.02	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=1.027;DP=567;FS=10.932;HRun=0;HaplotypeScore=70.9053;InbreedingCoeff=0.7064;MQ=93.23;MQ0=0;MQRankSum=-1.273;QD=8.29;ReadPosRankSum=-1.248;VQSLOD=1.9299;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.27:0,87,1116	1/1:1,6:7:21.07:349,21,0	0/1:24,0:24:4.60:5,0,552	0/0:26,0:26:49:0,49,597	0/0:18,0:18:51.17:0,51,663	0/0:16,0:16:45.15:0,45,585	0/0:29,0:29:69.19:0,69,879	0/0:27,0:27:63.18:0,63,784	0/0:18,0:18:54.15:0,54,673	0/0:22,0:22:63.20:0,63,807	0/0:15,0:15:45.13:0,45,571	0/0:30,0:30:87.28:0,87,1131	0/0:19,0:19:48.16:0,48,624	0/0:18,0:18:45.13:0,45,571	0/0:12,0:12:33.11:0,33,429	0/0:20,0:20:48.14:0,48,610	0/0:34,0:34:93.30:0,93,1207	0/0:24,0:24:72.23:0,72,936	0/0:21,0:21:54.15:0,54,686	0/0:11,0:11:33.11:0,33,429	0/0:39,0:39:99:0,105,1350	0/0:10,0:10:18.04:0,18,220	0/0:12,0:12:33.11:0,33,428	0/0:23,0:23:69.21:0,69,882	0/0:15,0:15:36.10:0,36,452	0/0:20,0:20:57.18:0,57,741	0/0:13,0:13:33.11:0,33,429	0/0:11,0:11:33.11:0,33,429
chr10	105989813	.	G	GC	146.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.139;DP=545;FS=15.006;HRun=5;HaplotypeScore=56.6151;InbreedingCoeff=0.9474;MQ=84.43;MQ0=0;MQRankSum=-1.996;QD=20.86;ReadPosRankSum=-0.702;VQSLOD=1.8446;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:66.08:0,66,687	1/1:1,6:7:18.06:237,18,0	0/0:22,0:22:41.95:0,42,401	0/0:14,0:14:26.95:0,27,271	0/0:8,0:8:20.98:0,21,225	0/0:15,0:15:44.95:0,45,463	0/0:28,0:28:81.16:0,81,853	0/0:22,0:22:51.01:0,51,513	0/0:19,0:19:57.10:0,57,600	0/0:19,0:19:45.07:0,45,466	0/0:7,0:7:21.05:0,21,225	0/0:16,0:16:42.10:0,42,451	0/0:13,0:13:33.07:0,33,348	0/0:23,0:23:69.15:0,69,730	0/0:27,0:27:75.12:0,75,790	0/0:20,0:20:51.08:0,51,523	0/0:30,0:30:78.17:0,78,828	0/0:27,0:27:75.14:0,75,793	0/0:18,0:18:36.02:0,36,372	0/0:5,0:5:12.01:0,12,129	0/0:50,0:50:99:0,135,1402	0/0:10,0:10:20.99:0,21,195	0/0:10,0:10:30.08:0,30,322	0/0:33,0:33:90.22:0,90,967	0/0:12,0:12:27.02:0,27,277	0/0:21,0:21:51.12:0,51,542	0/0:29,0:29:78.18:0,78,830	0/0:13,0:13:30.03:0,30,308
chr10	105990165	.	A	AGCGCCC	11186.27	PASS	AB=0.794;AC=18;AF=0.321;AN=56;BaseQRankSum=-4.000;DP=520;FS=2.859;HRun=0;HaplotypeScore=110.4433;InbreedingCoeff=0.8062;MQ=79.40;MQ0=1;MQRankSum=-14.667;QD=59.50;ReadPosRankSum=-3.557;VQSLOD=3.9439;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.23:0,66,1579	1/1:2,0:3:6.02:198,6,0	0/0:19,0:19:54.19:0,54,1228	0/0:15,0:14:39.13:0,39,857	0/0:18,0:17:48.16:0,48,1114	1/1:3,7:11:24.08:860,24,0	1/1:11,27:39:96.27:3115,96,0	1/1:12,9:22:57.20:1844,57,0	0/0:17,0:17:45.15:0,45,1069	0/0:15,0:15:39.13:0,39,904	0/0:5,0:5:15.05:0,15,313	0/1:25,1:26:29.25:29,0,1703	0/0:12,0:12:36.09:0,36,814	0/0:20,0:20:60.21:0,60,1443	0/0:25,0:25:75.24:0,75,1756	0/0:19,0:19:54.17:0,54,1252	0/0:20,0:20:57.20:0,57,1370	0/0:25,0:25:72.21:0,72,1632	1/1:1,11:14:41.99:1224,42,0	1/1:1,5:6:12.04:426,12,0	0/1:16,17:40:32.20:1062,0,32	0/0:7,0:7:12.04:0,12,289	0/0:9,0:9:27.09:0,27,649	0/0:44,0:44:99:0,126,2884	1/1:2,12:14:42.14:1463,42,0	0/0:24,0:24:69.24:0,69,1621	1/1:4,6:13:27.09:966,27,0	0/0:14,0:14:42.06:0,42,812
chr10	105996734	.	A	AG	4863.75	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.083;DP=519;FS=7.845;HRun=2;HaplotypeScore=63.0351;InbreedingCoeff=0.9205;MQ=73.13;MQ0=1;MQRankSum=-1.224;QD=39.54;ReadPosRankSum=-3.169;VQSLOD=3.8004;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.28:0,93,1136	0/0:7,0:7:21.03:0,21,244	0/0:6,0:5:0.54:0,1,134	0/0:13,0:13:26.87:0,27,308	0/0:14,0:14:39.12:0,39,482	0/0:14,0:14:36.11:0,36,446	0/0:41,0:41:99:0,117,1450	1/1:3,31:34:93.30:1315,93,0	0/0:16,0:16:48.15:0,48,595	0/0:17,0:17:51.16:0,51,632	0/0:3,0:3:9.03:0,9,112	0/0:26,0:26:75.24:0,75,929	0/0:20,0:20:60.19:0,60,741	0/0:19,0:19:57.18:0,57,705	0/0:14,0:14:42.13:0,42,521	0/0:18,0:18:48.15:0,48,594	0/0:18,0:18:51.16:0,51,632	0/0:27,0:27:81.21:0,81,987	1/1:4,15:19:48.16:683,48,0	1/1:1,4:5:12.04:169,12,0	1/1:2,45:47:99:2006,141,0	0/0:11,0:11:30.08:0,30,359	0/0:11,0:11:33.10:0,33,409	0/0:26,0:26:72.23:0,72,893	0/0:17,0:17:51.16:0,51,629	0/0:22,0:22:60.16:0,60,720	1/1:1,17:18:48.16:691,48,0	0/0:5,0:5:15.05:0,15,186
chr10	105999247	.	T	TC	7386.56	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-14.565;DP=703;FS=6.863;HRun=1;HaplotypeScore=64.2823;InbreedingCoeff=0.9981;MQ=74.15;MQ0=0;MQRankSum=-0.882;QD=40.14;ReadPosRankSum=0.312;VQSLOD=5.2694;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,1675	0/0:7,0:7:21.07:0,21,272	0/0:11,0:11:30.07:0,30,372	0/0:13,0:13:33.05:0,33,377	0/0:17,0:17:51.17:0,51,662	0/0:19,0:18:57.17:0,57,724	0/0:57,0:57:99:0,172,2190	1/1:4,18:22:51.17:760,51,0	0/0:23,0:23:66.16:0,66,824	0/0:16,0:16:42.14:0,42,545	0/0:15,0:15:42.09:0,42,532	0/0:41,0:41:99:0,123,1540	0/0:20,0:20:54.18:0,54,701	0/0:28,0:28:81.25:0,81,1038	0/0:22,0:22:63.20:0,63,818	0/0:18,0:18:54.18:0,54,701	0/0:32,0:32:96.29:0,96,1229	0/0:22,0:22:63.20:0,63,816	1/1:1,18:19:54.16:785,54,0	1/1:0,12:12:30.10:449,30,0	1/1:5,102:107:99:4451,298,0	0/0:13,0:13:33.11:0,33,428	0/0:8,0:8:24.04:0,24,292	0/0:37,0:37:99:0,111,1374	0/0:22,0:22:51.16:0,51,662	0/0:23,0:23:69.22:0,69,895	1/1:1,23:24:63.21:943,63,0	0/0:11,0:11:33.09:0,33,414
chr10	105999567	.	G	GGACT	617.94	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.768;DP=868;FS=9.048;HRun=0;HaplotypeScore=140.6960;InbreedingCoeff=0.9985;MQ=69.85;MQ0=20;MQRankSum=-1.364;QD=61.79;ReadPosRankSum=2.146;VQSLOD=5.7063;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:69,1:70:83.63:0,84,2767	1/1:1,9:9:27.09:712,27,0	0/0:38,0:29:60.94:0,61,1062	0/0:35,0:22:57.20:0,57,1014	0/0:26,0:26:63.22:0,63,1139	0/0:26,0:26:66.23:0,66,1204	0/0:35,0:33:72.22:0,72,1294	0/0:32,0:30:81.27:0,81,1417	0/0:30,0:30:69.24:0,69,1269	0/0:38,0:37:99:0,105,1865	0/0:23,0:23:51.17:0,51,938	0/0:40,0:40:90.27:0,90,1546	0/0:28,0:27:66.23:0,66,1188	0/0:31,0:31:57.19:0,57,988	0/0:33,0:33:84.29:0,84,1491	0/0:49,0:49:99:0,102,1773	0/0:48,0:48:99:0,102,1829	0/0:26,0:25:66.04:0,66,1201	0/0:24,0:22:60.21:0,60,1062	0/0:23,0:22:57.20:0,57,1038	0/0:33,0:32:78.27:0,78,1425	0/0:24,0:24:51.17:0,51,938	0/0:13,0:12:30.10:0,30,541	0/0:35,0:35:81.28:0,81,1479	0/0:29,0:29:72.25:0,72,1308	0/0:29,0:29:84.29:0,84,1536	0/0:23,0:23:60.21:0,60,1104	0/0:17,0:17:51.17:0,51,921
chr10	106000731	.	A	AG	3671.79	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-12.580;DP=647;FS=0.000;HRun=7;HaplotypeScore=64.7363;InbreedingCoeff=0.9950;MQ=77.34;MQ0=0;MQRankSum=-0.708;QD=28.91;ReadPosRankSum=-1.788;VQSLOD=3.5356;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,108,1037	0/0:7,0:7:18.03:0,18,174	0/0:15,0:15:38.89:0,39,359	0/0:17,0:18:37.65:0,38,400	0/0:13,0:13:36.06:0,36,347	0/0:25,0:25:66.10:0,66,637	0/0:34,0:34:90.14:0,90,869	1/1:2,20:22:54.17:651,54,0	0/0:24,0:24:63.06:0,63,601	0/0:20,0:20:42.05:0,42,406	0/0:9,0:9:21.03:0,21,202	0/0:30,0:30:84.12:0,84,806	0/0:29,0:29:72.11:0,72,695	0/0:29,0:29:81.13:0,81,782	0/0:25,0:25:69.11:0,69,666	0/0:20,0:20:48.07:0,48,464	0/0:31,0:31:84.08:0,84,801	0/0:21,0:21:63.10:0,63,608	1/1:4,23:27:69.20:822,69,0	1/1:2,11:13:33.10:399,33,0	1/1:5,46:51:99:1341,111,0	0/0:18,1:19:20.85:0,21,485	0/0:11,0:11:33.04:0,33,313	0/0:41,0:41:99:0,99,941	0/0:18,0:19:47.10:0,47,440	0/0:31,0:31:78.12:0,78,753	1/1:0,14:14:39.11:460,39,0	0/0:7,0:7:21.03:0,21,203
chr10	106002377	.	CCTGA	C	3716.94	PASS	AB=0.929;AC=11;AF=0.196;AN=56;BaseQRankSum=12.197;DP=824;FS=7.310;HRun=0;HaplotypeScore=135.8397;InbreedingCoeff=0.8784;MQ=72.74;MQ0=1;MQRankSum=-1.593;QD=24.95;ReadPosRankSum=-0.498;VQSLOD=2.8784;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,111,2564	0/0:9,0:9:15.02:0,15,313	0/0:27,0:22:24:0,24,429	0/0:25,0:24:31.91:0,32,607	0/0:15,0:15:32.94:0,33,801	0/0:24,0:24:48.15:0,48,1093	0/0:40,0:40:96.32:0,96,2278	1/1:15,14:29:42.11:632,42,0	0/0:35,0:35:69.14:0,69,1570	0/0:31,0:31:51.16:0,51,1136	0/0:18,0:18:30.09:0,30,655	0/0:53,0:53:99:0,114,2574	0/0:33,0:33:81.26:0,81,1903	0/0:37,0:37:72.23:0,72,1675	0/0:40,0:40:93.32:0,93,2233	0/0:34,0:34:72.24:0,72,1701	0/0:32,1:33:32.45:0,32,1785	0/0:30,0:30:69.22:0,69,1626	1/1:7,11:18:32.87:474,33,0	1/1:4,10:14:21.07:342,21,0	1/1:18,46:64:99:2000,123,0	0/0:34,0:34:72.25:0,72,1748	0/0:15,0:15:27.09:0,27,652	0/0:43,0:43:90.23:0,90,2025	0/0:16,0:16:39.13:0,39,947	0/0:33,0:33:53.23:0,53,1469	1/1:3,8:11:15.05:244,15,0	0/1:12,1:13:24.71:25,0,483
chr10	106003802	.	GT	G	2487.01	PASS	AB=0.834;AC=14;AF=0.250;AN=56;BaseQRankSum=10.209;DP=707;FS=5.762;HRun=10;HaplotypeScore=74.4576;InbreedingCoeff=0.7875;MQ=68.24;MQ0=0;MQRankSum=0.534;QD=15.84;ReadPosRankSum=1.076;VQSLOD=4.0614;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:53:99:0,135,1438	1/1:1,10:12:29.03:240,29,0	0/1:13,2:12:47.78:48,0,131	0/0:11,0:11:17.32:0,17,165	0/1:8,3:11:4.96:5,0,169	0/0:18,0:18:22.11:0,22,434	0/0:25,2:27:43.13:0,43,704	1/1:4,18:22:53.85:451,54,0	0/0:27,0:27:62.99:0,63,668	0/0:20,0:20:41.87:0,42,421	0/0:15,1:16:13.05:0,13,372	0/0:32,0:36:93.06:0,93,993	0/0:29,0:31:83.92:0,84,858	0/0:26,1:30:42.78:0,43,652	0/0:23,1:26:30.91:0,31,537	0/0:18,2:20:22.07:0,22,472	0/0:37,4:41:9.95:0,10,989	0/0:42,0:44:99:0,105,1124	1/1:5,17:22:20.79:409,21,0	1/1:1,14:16:15.43:307,15,0	1/1:5,29:34:46.92:642,47,0	0/0:22,1:24:36.87:0,37,591	0/0:10,1:11:4.03:0,4,272	0/0:40,0:40:99:0,105,1143	0/0:24,0:24:59.52:0,60,629	0/0:33,1:34:57.82:0,58,817	1/1:1,24:25:65.98:573,66,0	0/0:15,0:16:44.95:0,45,473
chr10	106006953	.	CG	C	5927.90	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.411;DP=822;FS=3.187;HRun=3;HaplotypeScore=74.8176;InbreedingCoeff=0.9978;MQ=78.67;MQ0=0;MQRankSum=-1.630;QD=32.57;ReadPosRankSum=0.703;VQSLOD=5.0968;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,169,2396	1/1:0,8:8:24.08:297,24,0	0/0:16,0:16:48.12:0,48,645	0/0:20,0:20:45.20:0,45,733	0/0:28,0:28:84.27:0,84,1188	0/0:25,0:25:72.24:0,72,1034	0/0:34,0:34:99:0,99,1352	1/1:1,31:32:90.26:1100,90,0	0/0:29,0:29:84.26:0,84,1186	0/0:28,0:28:84.27:0,84,1192	0/0:19,0:19:54.18:0,54,775	0/0:41,0:41:99:0,120,1673	0/0:25,0:25:69.22:0,69,975	0/0:24,0:24:72.22:0,72,1013	0/0:31,0:31:87.28:0,87,1234	0/0:26,0:26:78.24:0,78,1101	0/0:31,0:31:93.26:0,93,1279	0/0:32,0:32:87.29:0,87,1249	1/1:0,10:10:30.09:368,30,0	1/1:0,17:17:48.15:595,48,0	1/1:0,82:82:99:2417,196,0	0/0:26,0:26:75.19:0,75,1014	0/0:25,0:25:72.24:0,72,1033	0/0:57,0:57:99:0,166,2357	0/0:27,0:27:81.27:0,81,1161	0/0:30,0:30:90.27:0,90,1257	1/1:1,32:33:93.29:1151,93,0	0/0:6,0:6:18.03:0,18,238
chr10	106007182	.	GTT	G	4055.59	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.115;DP=616;FS=1.814;HRun=5;HaplotypeScore=79.2565;InbreedingCoeff=0.9941;MQ=82.01;MQ0=0;MQRankSum=-1.569;QD=38.62;ReadPosRankSum=0.281;VQSLOD=3.1712;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,2261	0/0:6,0:6:18.06:0,18,329	0/0:24,0:23:41.50:0,42,750	0/0:18,0:18:54.10:0,54,905	0/0:17,0:17:51.17:0,51,935	0/0:18,0:18:54.19:0,54,990	0/0:26,0:26:75.24:0,75,1342	1/1:2,16:18:48.16:665,48,0	0/0:32,0:32:93.30:0,93,1645	0/0:21,0:21:60.17:0,60,986	0/0:12,0:12:30.10:0,30,535	0/0:36,0:36:99:0,102,1870	0/0:24,0:24:69.24:0,69,1265	0/0:25,0:25:75.24:0,75,1318	0/0:27,0:27:75.23:0,75,1289	0/0:14,0:14:39.13:0,39,708	0/0:32,0:32:90.31:0,90,1642	0/0:31,0:31:87.24:0,87,1524	1/1:0,15:15:42.14:586,42,0	1/1:0,15:15:45.15:629,45,0	1/1:0,34:34:93.31:1295,93,0	0/0:18,0:18:45.15:0,45,797	0/0:9,0:9:27.08:0,27,465	0/0:20,0:20:57.20:0,57,1045	0/0:27,0:27:78.25:0,78,1347	0/0:26,0:26:72.25:0,72,1306	1/1:0,23:23:63.11:880,63,0	0/0:5,0:5:15.05:0,15,275
chr10	106010373	.	TG	T	3905.05	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.127;DP=692;FS=4.942;HRun=7;HaplotypeScore=69.7257;InbreedingCoeff=1.0000;MQ=85.85;MQ0=0;MQRankSum=-1.935;QD=25.36;ReadPosRankSum=-0.708;VQSLOD=3.8974;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,120,1497	1/1:2,14:16:45.09:454,45,0	0/0:25,0:25:69.14:0,69,797	0/0:26,0:26:47.72:0,48,493	0/0:22,0:22:57.18:0,57,717	0/0:18,0:18:54.17:0,54,676	0/0:19,0:19:51.16:0,51,642	1/1:1,21:23:65.16:636,65,0	0/0:28,0:28:78.23:0,78,967	0/0:31,0:31:81.26:0,81,1019	0/0:18,0:18:51.16:0,51,640	0/0:21,0:21:54.17:0,54,679	0/0:28,0:28:78.22:0,78,955	0/0:19,0:19:51.16:0,51,638	0/0:24,0:24:63.20:0,63,792	0/0:24,0:24:66.20:0,66,819	0/0:29,0:29:81.25:0,81,1009	0/0:20,0:20:57.18:0,57,717	1/1:2,22:24:66.15:673,66,0	1/1:3,18:21:54.12:550,54,0	1/1:8,40:48:99:1041,102,0	0/0:35,0:35:84.25:0,84,1054	0/0:13,0:13:36.12:0,36,453	0/0:23,0:23:57.18:0,57,717	0/0:20,0:20:60.17:0,60,731	0/0:37,0:37:99:0,105,1294	1/1:1,21:22:54.12:551,54,0	0/0:13,0:13:39.12:0,39,491
chr10	106013862	.	GTCCTGT	G	4374.66	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.714;DP=853;FS=9.908;HRun=0;HaplotypeScore=181.7530;InbreedingCoeff=0.9994;MQ=78.57;MQ0=0;MQRankSum=-7.634;QD=32.40;ReadPosRankSum=-6.129;VQSLOD=1.9438;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,141,4345	0/0:20,0:20:54.19:0,54,1869	0/0:31,0:31:80.48:0,80,2309	0/0:25,0:24:65.40:0,65,1705	0/0:26,0:26:72.19:0,72,2129	0/0:24,0:24:63.20:0,63,2030	0/0:40,0:40:99:0,111,3587	1/1:1,27:28:78.26:1540,78,0	0/0:33,0:33:99:0,99,3133	0/0:30,0:30:84.29:0,84,2778	0/0:14,0:14:39.13:0,39,1237	0/0:44,0:44:99:0,126,4076	0/0:42,0:42:99:0,105,3355	0/0:48,0:48:99:0,132,4277	0/0:53,0:53:99:0,150,4763	0/0:44,0:44:99:0,117,3697	0/0:21,0:21:60.18:0,60,1911	0/0:27,0:27:78.24:0,78,2480	1/1:6,20:26:57:994,57,0	1/1:4,18:22:41.88:569,42,0	1/1:14,30:44:30.43:488,30,0	0/0:25,0:25:66.23:0,66,2160	0/0:27,0:27:75.26:0,75,2499	0/0:31,0:31:81.28:0,81,2804	0/0:22,0:22:57.20:0,57,1817	0/0:33,0:33:93.32:0,93,3019	1/1:1,14:15:36.12:783,36,0	0/0:8,0:8:24.08:0,24,831
chr10	106014046	.	TCCGCCC	T	5070.71	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.720;DP=813;FS=14.000;HRun=0;HaplotypeScore=171.7024;InbreedingCoeff=0.9988;MQ=79.26;MQ0=0;MQRankSum=-12.503;QD=48.76;ReadPosRankSum=-4.006;VQSLOD=2.8929;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,157,5476	0/0:10,0:10:30.10:0,30,1080	0/0:20,0:20:57.16:0,57,1689	0/0:21,0:21:48.13:0,48,1352	0/0:16,0:16:48.16:0,48,1658	0/0:26,0:26:75.26:0,75,2703	0/0:36,0:36:99:0,105,3662	1/1:0,22:22:60.19:1373,60,0	0/0:35,0:35:99:0,105,3690	0/0:33,0:33:93.32:0,93,3321	0/0:15,0:15:42.11:0,42,1407	0/0:41,0:41:99:0,114,4025	0/0:36,0:36:99:0,99,3526	0/0:41,0:41:99:0,123,4232	0/0:39,0:39:99:0,108,3784	0/0:39,0:39:99:0,117,4050	0/0:48,0:48:99:0,141,4994	0/0:28,0:28:81.28:0,81,2890	1/1:3,10:13:24.08:533,24,0	1/1:1,18:19:48.16:1053,48,0	1/1:7,30:37:66.22:1427,66,0	0/0:27,0:27:78.25:0,78,2696	0/0:26,0:26:72.25:0,72,2583	0/0:47,0:47:99:0,135,4796	0/0:27,0:27:78.27:0,78,2787	0/0:35,0:35:99:0,102,3628	1/1:2,11:13:30.09:685,30,0	0/0:8,0:8:24.08:0,24,865
chr10	106015037	.	G	GTTAT	865.57	PASS	AB=1.000;AC=15;AF=0.313;AN=48;BaseQRankSum=2.271;DP=329;FS=6.000;HRun=0;HaplotypeScore=64.7115;InbreedingCoeff=0.6536;MQ=69.07;MQ0=2;MQRankSum=-3.663;QD=9.62;ReadPosRankSum=-2.867;VQSLOD=0.5462;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:42.05:0,42,603	0/0:8,0:8:2.28:0,2,23	./.	./.	0/1:10,0:10:4.89:5,0,172	0/0:11,0:11:18.06:0,18,287	0/0:15,0:15:1.41:0,1,268	1/1:25,0:25:21.43:191,21,0	0/0:9,0:9:18.06:0,18,287	1/1:2,5:7:15.05:360,15,0	1/1:2,4:7:15.01:300,15,0	0/0:10,0:10:9.03:0,9,144	0/0:9,0:9:9.03:0,9,144	0/0:11,0:11:18.06:0,18,282	0/0:8,0:8:12.04:0,12,192	0/0:6,0:6:9.03:0,9,144	0/0:38,0:38:66.20:0,66,1005	0/0:27,0:27:51.13:0,51,773	1/1:13,0:13:3.90:54,4,0	1/1:8,0:8:2.99:24,3,0	1/1:9,0:9:5.87:41,6,0	./.	./.	0/0:7,0:7:3.01:0,3,48	0/0:12,0:12:21.07:0,21,334	0/0:10,0:10:15.05:0,15,239	1/1:10,0:11:3.01:50,3,0	0/0:14,0:14:24.08:0,24,383
chr10	106015066	.	TTAC	T	1212.41	PASS	AB=0.878;AC=11;AF=0.220;AN=50;BaseQRankSum=6.280;DP=265;FS=20.037;HRun=0;HaplotypeScore=46.8751;InbreedingCoeff=0.4759;MQ=53.90;MQ0=2;MQRankSum=-4.391;QD=17.83;ReadPosRankSum=-3.296;VQSLOD=0.6557;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.17:0,57,1187	1/1:1,3:4:6.02:102,6,0	./.	./.	0/0:7,0:7:21.07:0,21,460	0/0:10,0:10:30.10:0,30,624	0/0:10,0:10:7.32:0,7,553	0/1:23,13:33:86.37:796,0,86	0/0:7,0:7:21.07:0,21,429	0/0:10,0:10:7.90:0,8,379	0/1:10,0:10:19.56:20,0,363	0/0:4,0:4:12.04:0,12,261	0/0:4,0:4:12.04:0,12,260	0/0:8,0:8:18.06:0,18,399	0/0:9,0:9:27.09:0,27,558	0/0:7,0:7:21.07:0,21,443	0/0:36,0:36:76.34:0,76,1977	0/0:23,0:23:18.31:0,18,1405	0/1:8,1:9:18.95:179,0,19	1/1:0,4:4:8.99:122,9,0	1/1:2,0:2:6.02:86,6,0	./.	0/0:5,0:5:15.05:0,15,301	0/0:2,0:2:3.01:0,3,69	0/0:16,0:16:48.16:0,48,1033	0/0:7,0:7:21.07:0,21,454	1/1:2,1:3:5.98:53,6,0	0/0:8,0:8:24.08:0,24,540
chr10	106017619	.	T	TATAC	10788.63	PASS	AB=0.974;AC=43;AF=0.827;AN=52;BaseQRankSum=-10.008;DP=779;FS=0.998;HRun=0;HaplotypeScore=117.7443;InbreedingCoeff=0.8355;MQ=64.03;MQ0=9;MQRankSum=1.166;QD=17.49;ReadPosRankSum=-0.724;VQSLOD=4.4521;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,10:38:6.02:140,6,0	1/1:8,4:13:12.04:269,12,0	./.	./.	1/1:21,0:41:23.11:357,23,0	1/1:13,13:28:18.06:421,18,0	1/1:12,4:16:6.02:140,6,0	1/1:45,0:44:5.95:56,6,0	1/1:12,12:24:21.07:491,21,0	0/1:36,1:37:0.95:1,0,893	0/0:36,0:36:69.11:0,69,887	1/1:13,12:25:24.08:561,24,0	1/1:12,8:21:18.06:420,18,0	1/1:9,12:22:36.12:826,36,0	1/1:11,22:34:33.09:772,33,0	0/0:32,0:32:66.17:0,66,929	1/1:11,8:19:21.07:487,21,0	1/1:16,10:26:36.08:776,36,0	1/1:13,5:18:15.05:325,15,0	1/1:13,17:31:33.11:770,33,0	1/1:13,12:25:21.07:491,21,0	1/1:10,12:21:24.08:552,24,0	1/1:12,9:19:15.05:351,15,0	1/1:16,9:26:24.08:548,24,0	1/1:15,29:46:60.21:1404,60,0	0/0:27,0:28:54.13:0,54,731	1/1:21,14:35:27.09:630,27,0	0/0:17,0:17:27.09:0,27,410
chr10	106018962	.	A	AGGAAGGAG	995.87	PASS	AB=0.781;AC=10;AF=0.179;AN=56;BaseQRankSum=1.057;DP=382;FS=1.357;HRun=0;HaplotypeScore=86.4700;InbreedingCoeff=0.7283;MQ=56.86;MQ0=12;MQRankSum=-4.291;QD=13.46;ReadPosRankSum=-3.648;VQSLOD=0.6432;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:57.07:0,57,977	0/0:6,0:6:8.99:0,9,131	0/0:13,0:4:8.75:0,9,63	0/0:16,0:9:8.87:0,9,151	0/0:13,0:13:38.86:0,39,843	0/0:11,0:10:33.01:0,33,561	0/0:22,0:21:60.08:0,60,1026	1/1:15,0:12:24.41:204,24,0	0/0:16,0:16:39.01:0,39,563	0/0:11,0:11:30.07:0,30,540	0/0:3,0:3:9.02:0,9,139	0/0:25,0:23:59.79:0,60,737	0/0:21,0:20:54.02:0,54,905	0/0:16,0:16:44.97:0,45,851	0/0:18,0:17:48.02:0,48,539	0/0:14,0:14:39.06:0,39,674	0/0:17,0:17:42:0,42,727	0/0:9,0:9:20.98:0,21,368	1/1:6,0:5:11.97:111,12,0	1/1:8,0:8:16.22:128,16,0	1/1:20,0:18:47.71:463,48,0	0/0:10,0:10:20.96:0,21,264	0/0:9,0:9:21.01:0,21,296	0/1:16,0:16:3.51:4,0,642	0/0:8,0:7:21.03:0,21,327	0/0:16,0:15:42.07:0,42,683	0/1:2,7:9:16.95:248,0,17	0/0:10,0:9:23.92:0,24,335
chr10	106019015	.	GGAAGGAAA	G	158.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.886;DP=457;FS=0.000;HRun=0;HaplotypeScore=108.9237;InbreedingCoeff=0.7084;MQ=60.98;MQ0=8;MQRankSum=-4.740;QD=39.51;ReadPosRankSum=-0.008;VQSLOD=3.3302;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:66.16:0,66,2003	1/1:0,4:4:9.03:241,9,0	0/0:12,0:7:8.78:0,9,330	0/0:8,0:7:8.54:0,9,173	0/0:22,0:21:56.92:0,57,1948	0/0:13,0:12:30.09:0,30,1063	0/0:27,0:26:69.20:0,69,2275	0/0:21,0:20:57.10:0,57,1184	0/0:15,0:15:39.13:0,39,1591	0/0:22,0:22:51.06:0,51,1908	0/0:10,0:9:24.08:0,24,933	0/0:16,0:16:45.15:0,45,1586	0/0:19,0:19:48.15:0,48,1857	0/0:16,0:15:36.10:0,36,1301	0/0:19,0:18:45.63:0,46,1923	0/0:12,0:12:33.09:0,33,1104	0/0:22,0:22:55.36:0,55,1668	0/0:18,0:18:51.13:0,51,1474	0/0:11,0:11:3.27:0,3,506	0/0:8,0:7:21.04:0,21,641	0/0:27,0:27:62.48:0,62,2183	0/0:15,0:14:42.13:0,42,1391	0/0:9,0:9:26.65:0,27,688	0/0:29,0:28:72.88:0,73,2500	0/0:15,0:15:45.12:0,45,1389	0/0:12,0:12:33.10:0,33,1176	0/0:14,0:14:39.09:0,39,1347	0/0:15,0:15:42.12:0,42,1406
chr10	106026530	.	TG	T	1117.41	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.420;DP=671;FS=3.715;HRun=1;HaplotypeScore=81.9593;InbreedingCoeff=0.9190;MQ=61.08;MQ0=1;MQRankSum=-5.754;QD=12.02;ReadPosRankSum=-3.757;VQSLOD=0.8638;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:92.81:0,93,1386	1/1:4,0:4:3.84:13,4,0	0/0:35,0:26:59.65:0,60,768	0/0:20,0:18:49.97:0,50,515	0/0:39,0:39:99:0,114,1442	0/0:16,0:15:48.14:0,48,658	0/0:25,0:25:75.21:0,75,991	1/1:20,3:21:12.58:198,13,0	0/0:30,0:30:87.25:0,87,1164	0/0:32,0:32:96.28:0,96,1257	0/0:27,0:26:78.24:0,78,1051	0/0:21,0:21:63.19:0,63,844	0/0:16,0:16:48.12:0,48,647	0/0:23,0:23:66.20:0,66,888	0/0:18,0:18:54.13:0,54,699	0/0:16,0:16:48.14:0,48,633	0/0:47,0:46:99:0,132,1781	0/0:25,0:25:75.12:0,75,951	1/1:12,7:22:39.46:357,39,0	1/1:7,13:20:36.73:368,37,0	1/1:5,6:11:2.08:133,2,0	0/0:22,0:22:66.17:0,66,834	0/0:17,0:17:51.06:0,51,658	0/0:35,0:35:99:0,102,1315	0/0:20,0:20:60.18:0,60,838	0/0:30,0:30:90.27:0,90,1187	1/1:3,8:11:20.48:219,20,0	0/0:24,0:24:72.24:0,72,1002
chr10	106026533	.	TG	T	989.44	PASS	AB=0.784;AC=10;AF=0.179;AN=56;BaseQRankSum=12.371;DP=679;FS=1.714;HRun=1;HaplotypeScore=83.2326;InbreedingCoeff=0.8173;MQ=60.18;MQ0=1;MQRankSum=-6.747;QD=10.64;ReadPosRankSum=-3.613;VQSLOD=0.3442;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,1:41:97.82:0,98,1732	1/1:4,0:4:2.69:8,3,0	0/0:32,1:24:68.46:0,68,979	0/0:20,0:18:48.09:0,48,576	0/0:40,0:40:99:0,120,1868	0/0:16,0:15:48.16:0,48,762	0/0:26,0:26:78.24:0,78,1187	0/1:19,3:20:0.03:154,0,0	0/0:30,0:30:90.30:0,90,1399	0/0:34,0:34:99:0,99,1521	0/0:26,0:25:75.24:0,75,1157	0/0:23,0:23:69.21:0,69,1035	0/0:16,0:16:48.16:0,48,767	0/0:24,0:24:72.23:0,72,1098	0/0:18,0:18:54.17:0,54,827	0/0:16,0:16:48.15:0,48,728	0/0:48,0:47:99:0,135,2084	0/0:25,0:25:75.25:0,75,1172	1/1:15,6:20:24.94:289,25,0	1/1:10,11:21:31.45:333,31,0	0/1:6,5:11:3.73:133,0,4	0/0:23,0:23:69.23:0,69,1067	0/0:18,0:18:54.17:0,54,810	0/0:34,0:34:99:0,99,1563	0/0:20,0:20:60.20:0,60,958	0/0:30,0:30:90.29:0,90,1387	1/1:6,8:13:21.37:229,21,0	0/0:24,0:24:72.24:0,72,1132
chr10	106026536	.	TG	T	921.88	PASS	AB=0.793;AC=7;AF=0.125;AN=56;BaseQRankSum=9.408;DP=681;FS=10.155;HRun=1;HaplotypeScore=82.3636;InbreedingCoeff=0.4893;MQ=59.97;MQ0=1;MQRankSum=-3.558;QD=10.24;ReadPosRankSum=-3.556;VQSLOD=-0.3610;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1835	0/0:5,0:5:3.88:0,4,34	0/0:34,0:23:68.59:0,69,995	0/0:18,0:16:25.13:0,25,429	0/0:41,0:41:99:0,117,1793	0/0:17,0:16:51.16:0,51,786	0/0:26,0:26:78.26:0,78,1209	0/1:19,3:21:35.81:202,0,36	0/0:30,0:30:90.29:0,90,1393	0/0:34,0:34:99:0,99,1536	0/0:26,0:25:75.24:0,75,1154	0/0:24,0:24:72.24:0,72,1112	0/0:17,0:17:51.17:0,51,807	0/0:24,0:24:72.24:0,72,1119	0/0:18,0:18:54.18:0,54,846	0/0:16,0:16:48.15:0,48,726	0/0:47,0:46:99:0,129,2037	0/0:25,0:25:72.24:0,72,1132	0/1:14,5:18:11.77:194,0,12	1/1:12,9:21:16.08:260,16,0	0/1:7,5:12:22.41:114,0,22	0/0:23,0:23:69.22:0,69,1048	0/0:18,0:18:54.13:0,54,774	0/0:34,0:34:99:0,99,1543	0/0:21,0:21:63.21:0,63,1000	0/0:29,0:29:84.29:0,84,1321	1/1:9,7:16:22.85:294,23,0	0/0:22,0:22:66.21:0,66,1030
chr10	106027796	.	AGT	A	381.71	PASS	AB=0.904;AC=20;AF=0.385;AN=52;BaseQRankSum=6.121;DP=630;FS=3.619;HRun=0;HaplotypeScore=98.9292;InbreedingCoeff=-0.2183;MQ=60.71;MQ0=14;MQRankSum=-0.308;QD=1.10;ReadPosRankSum=0.834;VQSLOD=1.7075;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,2:28:15.19:15,0,166	1/1:8,0:5:2.84:14,3,0	0/0:23,0:13:0:0,0,0	./.	0/0:14,0:14:14.52:0,15,165	0/1:13,3:15:21.14:21,0,98	0/1:22,1:23:25.87:26,0,136	./.	0/1:23,5:27:44.48:44,0,154	0/0:22,0:21:15.02:0,15,185	0/1:10,1:11:23.71:24,0,80	0/1:23,6:28:70.19:70,0,236	0/1:17,2:19:16.93:17,0,260	0/0:29,0:29:30.43:0,30,517	0/0:24,3:27:24.03:0,24,294	0/1:28,3:30:35.49:35,0,308	0/1:27,2:29:29.36:29,0,383	0/0:20,1:21:3.36:0,3,408	0/1:15,0:13:5.35:8,0,5	1/1:14,0:14:5.68:28,6,0	0/0:49,5:52:3.19:0,3,37	0/0:10,0:10:6.02:0,6,85	0/1:13,2:15:50.39:50,0,117	0/0:34,0:34:48.12:0,48,743	0/1:17,2:19:73.46:73,0,195	0/1:24,2:25:5.67:6,0,253	1/1:27,0:25:11.19:56,11,0	0/1:8,1:9:14.80:15,0,131
chr10	106027824	.	TGTGTGTGTGTGTGTGC	T	415.80	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=1.413;DP=611;FS=1.889;HRun=0;HaplotypeScore=222.8975;InbreedingCoeff=0.1408;MQ=50.41;MQ0=23;MQRankSum=0.088;QD=3.49;ReadPosRankSum=-3.421;VQSLOD=2.4035;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:54.15:0,54,2521	1/1:1,7:5:3.01:140,3,0	0/0:13,0:5:14.15:0,14,111	0/0:20,0:7:14.10:0,14,111	0/0:10,0:10:15.05:0,15,656	0/0:15,0:14:27.08:0,27,1010	0/0:40,0:38:63.95:0,64,2339	0/1:16,0:13:18.53:19,0,221	0/0:25,0:23:39.12:0,39,1631	0/0:17,0:15:45.02:0,45,1588	0/0:7,0:7:15.02:0,15,587	0/0:27,0:24:51.05:0,51,2019	0/0:17,0:16:33.11:0,33,1703	0/0:32,0:31:70.72:0,71,3067	0/0:24,0:24:45.12:0,45,1572	0/0:31,0:28:55.78:0,56,2264	0/0:30,0:29:77.95:0,78,3361	0/0:25,0:25:57.32:0,57,1860	0/1:12,0:8:72.72:120,0,73	0/0:10,0:10:12.40:0,12,118	0/1:63,0:60:99:145,0,897	0/0:9,0:7:12.04:0,12,379	0/0:13,0:12:32.86:0,33,1033	0/0:37,0:38:88.17:0,88,4157	0/0:19,0:19:11.64:0,12,1283	0/0:22,0:19:53.78:0,54,1867	0/1:20,0:18:14.81:113,0,15	0/0:15,0:13:32.92:0,33,1028
chr10	106027830	.	TGTGTGTGTGC	T	1517.33	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-0.482;DP=598;FS=9.783;HRun=0;HaplotypeScore=164.9066;InbreedingCoeff=0.8745;MQ=51.13;MQ0=19;MQRankSum=-0.720;QD=12.54;ReadPosRankSum=-1.759;VQSLOD=1.8125;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:65.94:0,66,1627	1/1:7,0:4:3.01:78,3,0	0/0:15,0:7:18.46:0,18,123	0/0:16,0:7:13.24:0,13,111	0/0:10,0:10:17.99:0,18,470	0/0:14,0:13:23.98:0,24,568	0/0:39,0:37:57.85:0,58,1447	1/1:12,0:9:6.33:117,6,0	0/0:23,0:21:41.92:0,42,1033	0/0:17,0:16:41.87:0,42,930	0/0:9,0:9:14.97:0,15,364	0/0:26,0:23:47.95:0,48,1325	0/0:17,0:16:36.08:0,36,1112	0/0:32,0:31:71.46:0,71,2093	0/0:24,0:24:41.98:0,42,1028	0/0:29,0:26:57.89:0,58,1530	0/0:29,0:28:65.97:0,66,2052	0/0:25,0:25:54.31:0,54,1326	1/1:9,0:7:21.04:256,21,0	1/1:3,7:10:11.63:201,12,0	1/1:64,0:61:61.46:682,61,0	0/0:9,0:7:9:0,9,224	0/0:14,0:13:32.52:0,33,624	0/0:38,0:39:87.30:0,87,2790	0/0:19,0:19:3.69:0,4,789	0/0:23,0:21:58.27:0,58,1269	1/1:5,14:18:12.17:354,12,0	0/0:15,0:13:32.90:0,33,710
chr10	106029094	.	TA	T	1437.18	PASS	AB=0.787;AC=10;AF=0.179;AN=56;BaseQRankSum=9.409;DP=587;FS=0.442;HRun=13;HaplotypeScore=67.9268;InbreedingCoeff=0.7162;MQ=69.95;MQ0=0;MQRankSum=0.895;QD=11.59;ReadPosRankSum=0.367;VQSLOD=3.4216;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,2:18:20.05:0,20,325	0/0:12,0:12:27.04:0,27,258	0/1:15,0:14:0.96:1,0,45	0/0:8,0:8:5.95:0,6,43	0/0:34,0:35:62.62:0,63,566	0/0:19,0:23:56.58:0,57,501	0/0:15,1:17:19.90:0,20,319	0/1:7,19:26:13.29:331,0,13	0/0:21,0:21:38.12:0,38,402	0/0:22,1:24:53.92:0,54,510	0/0:22,0:22:36.05:0,36,345	0/0:20,0:20:48.07:0,48,462	0/0:14,2:17:2.31:0,2,312	0/0:16,0:16:38.87:0,39,349	0/0:23,0:24:56.92:0,57,535	0/0:24,0:24:54.08:0,54,520	0/0:29,1:30:31.25:0,31,608	0/0:17,0:17:17.22:0,17,328	1/1:3,13:16:38.47:274,38,0	1/1:3,24:27:68.31:490,68,0	1/1:6,11:17:26.82:197,27,0	0/0:28,0:28:57.05:0,57,538	0/0:22,0:22:6.48:0,6,59	0/0:25,0:25:51.95:0,52,490	0/0:21,0:21:42.06:0,42,403	0/0:27,0:27:42.52:0,43,402	1/1:2,20:22:41.74:306,42,0	0/0:12,0:12:9:0,9,82
chr10	106029305	.	AGAGCAAGCT	A	994.82	PASS	AB=0.933;AC=7;AF=0.140;AN=50;BaseQRankSum=5.614;DP=657;FS=5.109;HRun=0;HaplotypeScore=117.4869;InbreedingCoeff=0.6751;MQ=41.81;MQ0=104;MQRankSum=-3.610;QD=14.21;ReadPosRankSum=-0.725;VQSLOD=1.8719;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:33:38.97:0,39,1526	0/0:8,0:5:3.01:0,3,142	./.	./.	0/0:15,0:14:30.08:0,30,1062	0/0:24,0:20:21.07:0,21,951	0/0:32,0:18:9.03:0,9,375	./.	0/0:19,0:18:20.86:0,21,877	0/0:17,0:16:36.12:0,36,1606	0/0:11,0:9:18.06:0,18,696	0/0:24,0:21:24.34:0,24,1034	0/0:23,0:22:32.68:0,33,1252	0/0:26,0:23:30.10:0,30,1320	0/0:33,0:25:45.15:0,45,2050	0/0:28,0:24:51.18:0,51,2237	0/0:55,0:39:63.22:0,63,2724	0/0:30,0:17:23.87:0,24,874	0/1:13,1:4:61.74:82,0,62	1/1:9,8:16:12.14:700,12,0	1/1:25,0:10:10.83:253,11,0	0/0:17,0:17:42.14:0,42,1686	0/0:11,0:11:21.54:0,22,809	0/0:41,0:30:54.16:0,54,2039	0/0:14,0:12:30.10:0,30,1079	0/0:34,0:25:66.22:0,66,2901	1/1:9,5:10:3.01:88,3,0	0/0:21,0:15:33.11:0,33,1564
chr10	106029312	.	G	GC	375.67	PASS	AB=0.867;AC=7;AF=0.140;AN=50;BaseQRankSum=7.281;DP=640;FS=4.675;HRun=1;HaplotypeScore=60.0498;InbreedingCoeff=0.7906;MQ=39.77;MQ0=117;MQRankSum=-4.543;QD=5.37;ReadPosRankSum=0.401;VQSLOD=0.4727;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:26:39.13:0,39,505	0/0:6,0:3:3.01:0,3,39	./.	./.	0/0:13,0:11:29.78:0,30,361	0/0:21,0:16:21.07:0,21,273	0/0:35,0:19:9.03:0,9,117	./.	0/0:21,0:16:21.02:0,21,269	0/0:17,0:16:39.13:0,39,506	0/0:12,0:10:18.06:0,18,229	0/0:24,0:21:30.56:0,31,384	0/0:23,0:21:32.82:0,33,415	0/0:22,0:19:33.11:0,33,423	0/0:33,0:24:51.16:0,51,655	0/0:30,0:26:54.18:0,54,698	0/0:54,0:35:63.20:0,63,814	0/0:32,0:18:24.03:0,24,293	1/1:11,1:4:6.01:55,6,0	1/1:9,7:15:41.72:380,42,0	1/1:24,5:8:8.75:56,9,0	0/0:16,0:16:42.14:0,42,541	0/0:13,0:13:26.91:0,27,338	0/0:40,0:28:54.15:0,54,671	0/0:15,0:12:33.11:0,33,421	0/0:34,0:24:66.21:0,66,846	0/1:11,2:8:0.92:16,0,1	0/0:21,0:15:33.11:0,33,428
chr10	106029315	.	G	GGGGA	1386.97	PASS	AC=8;AF=0.160;AN=50;BaseQRankSum=8.687;DP=652;FS=6.484;HRun=0;HaplotypeScore=84.1211;InbreedingCoeff=0.8950;MQ=38.28;MQ0=127;MQRankSum=-5.441;QD=18.01;ReadPosRankSum=0.351;VQSLOD=2.8026;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:28:36.09:0,36,663	0/0:3,0:4:3.01:0,3,63	./.	./.	0/0:12,0:10:23.90:0,24,451	0/0:21,0:16:21.07:0,21,426	0/0:34,0:17:9.03:0,9,162	./.	0/0:22,0:17:20.90:0,21,439	0/0:18,0:17:42.13:0,42,816	0/0:13,0:10:18.06:0,18,364	0/0:23,0:20:29.74:0,30,588	0/0:23,0:21:33.09:0,33,594	0/0:23,0:19:33.11:0,33,675	0/0:37,0:25:51.16:0,51,1029	0/0:29,0:25:54.18:0,54,1095	0/0:50,0:31:63.14:0,63,1235	0/0:34,0:17:21.07:0,21,390	1/1:12,0:4:6.01:96,6,0	1/1:11,7:17:45.12:807,45,0	1/1:24,5:7:18.05:273,18,0	0/0:18,0:17:42.12:0,42,819	0/0:12,0:12:26.74:0,27,535	0/0:38,0:25:45.15:0,45,899	0/0:18,0:14:33.09:0,33,578	0/0:32,0:23:63.18:0,63,1279	1/1:15,1:11:18.05:358,18,0	0/0:20,0:14:33.11:0,33,692
chr10	106030422	.	GAC	G	152.92	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.220;DP=571;FS=1.542;HRun=0;HaplotypeScore=77.3520;InbreedingCoeff=0.9776;MQ=66.02;MQ0=0;MQRankSum=0.612;QD=21.85;ReadPosRankSum=0.462;VQSLOD=3.5451;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,1903	1/1:1,6:7:18.06:243,18,0	0/0:10,0:9:16.35:0,16,217	0/0:14,0:12:23.97:0,24,366	0/0:19,0:19:51.12:0,51,802	0/0:17,0:17:48.13:0,48,784	0/0:16,0:16:48.16:0,48,830	0/0:23,0:23:63.20:0,63,1057	0/0:22,0:22:63.22:0,63,1087	0/0:17,0:17:39.13:0,39,659	0/0:22,0:22:63.22:0,63,1104	0/0:18,0:18:51.17:0,51,894	0/0:14,0:14:42.14:0,42,725	0/0:17,0:17:45.15:0,45,789	0/0:26,0:26:69.24:0,69,1209	0/0:29,0:29:84.27:0,84,1433	0/0:13,0:13:39.13:0,39,683	0/0:30,0:30:87.30:0,87,1511	0/0:22,0:22:66.22:0,66,1117	0/0:24,0:24:69.24:0,69,1190	0/0:11,0:11:30.10:0,30,519	0/0:22,0:22:66.23:0,66,1153	0/0:21,0:21:48.15:0,48,813	0/0:25,0:25:60.21:0,60,1051	0/0:18,0:18:54.18:0,54,930	0/0:31,0:31:90.31:0,90,1573	0/0:27,0:26:72.19:0,72,1190	0/0:15,0:15:42.14:0,42,736
chr10	106035368	.	A	AAAGG	4725.97	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=-9.974;DP=621;FS=2.978;HRun=0;HaplotypeScore=93.7577;InbreedingCoeff=0.9516;MQ=66.19;MQ0=0;MQRankSum=-2.363;QD=36.92;ReadPosRankSum=-2.494;VQSLOD=4.2085;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:81.25:0,81,1248	./.	0/0:18,0:16:11.83:0,12,181	0/0:15,0:14:6.02:0,6,97	0/0:29,0:29:66.21:0,66,1035	0/0:25,0:25:63.21:0,63,1010	0/0:31,0:31:63.21:0,63,964	1/1:22,7:29:39.13:806,39,0	0/0:25,0:25:42.75:0,43,988	0/0:19,0:19:24.08:0,24,382	0/0:11,0:11:18.05:0,18,266	0/0:26,0:26:51.17:0,51,816	0/0:30,0:30:72.25:0,72,1149	0/0:24,0:24:51.17:0,51,818	0/0:28,0:28:54.18:0,54,859	0/0:27,0:27:69.24:0,69,1108	0/0:24,0:24:42.13:0,42,643	0/0:25,0:25:45.15:0,45,713	1/1:11,9:20:33.11:777,33,0	1/1:9,15:24:45.15:1050,45,0	1/1:9,26:35:57.20:1370,57,0	0/0:7,0:7:12.04:0,12,184	0/0:12,0:12:27.09:0,27,432	0/0:24,0:24:60.20:0,60,953	0/0:12,0:12:12.04:0,12,193	0/0:29,0:29:72.23:0,72,1099	1/1:5,15:20:30.10:723,30,0	0/0:13,0:13:24.08:0,24,387
chr10	106035537	.	AC	A	4255.37	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=11.387;DP=612;FS=6.589;HRun=1;HaplotypeScore=59.7962;InbreedingCoeff=0.9862;MQ=55.41;MQ0=9;MQRankSum=-2.328;QD=38.34;ReadPosRankSum=-2.049;VQSLOD=4.3835;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:69.24:0,69,1095	./.	./.	0/0:8,0:4:9.03:0,9,142	0/0:26,0:24:60.19:0,60,936	0/0:27,0:27:75.26:0,75,1193	0/0:18,0:18:42.14:0,42,671	1/1:3,30:30:90.30:1258,90,0	0/0:22,0:22:66.23:0,66,1052	0/0:24,0:23:66.23:0,66,1055	0/0:22,0:22:51.17:0,51,815	0/0:19,0:19:57.19:0,57,911	0/0:26,0:26:75.24:0,75,1176	0/0:27,0:26:78.27:0,78,1245	0/0:38,0:37:99:0,114,1775	0/0:26,0:26:78.27:0,78,1245	0/0:39,0:39:99:0,114,1773	0/0:21,0:20:60.20:0,60,959	1/1:0,20:20:57.19:796,57,0	1/1:0,15:14:42.10:565,42,0	1/1:0,13:13:33.11:462,33,0	0/0:18,0:18:48.15:0,48,740	0/0:15,0:14:36.11:0,36,553	0/0:14,0:14:42.14:0,42,671	0/0:27,0:27:78.26:0,78,1220	0/0:39,0:39:99:0,114,1823	1/1:0,30:30:84.28:1175,84,0	0/0:15,0:15:42.14:0,42,671
chr10	106038028	.	CT	C	2419.19	PASS	AB=0.917;AC=11;AF=0.196;AN=56;BaseQRankSum=10.331;DP=686;FS=0.376;HRun=10;HaplotypeScore=90.6018;InbreedingCoeff=0.7435;MQ=70.33;MQ0=1;MQRankSum=-0.652;QD=15.61;ReadPosRankSum=-0.137;VQSLOD=3.8094;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:68.35:0,68,695	0/0:10,1:11:1.14:0,1,177	0/0:29,1:20:0.29:0,0,268	0/0:28,0:19:23.25:0,23,166	0/0:33,0:33:81.18:0,81,877	0/0:23,0:24:60:0,60,644	0/0:14,1:15:3.83:0,4,244	1/1:12,19:32:55.94:463,56,0	0/0:12,1:13:4.02:0,4,264	0/0:28,1:29:46.05:0,46,715	0/0:22,0:22:65.19:0,65,692	0/0:20,0:20:48.13:0,48,530	0/0:29,0:29:46.09:0,46,713	0/0:17,0:17:42.11:0,42,462	0/0:31,1:32:57.97:0,58,825	0/0:27,0:27:78.10:0,78,815	0/0:30,0:30:50.20:0,50,733	0/1:19,2:22:12.11:12,0,522	1/1:7,15:19:47.97:414,48,0	1/1:9,18:28:64.99:546,65,0	1/1:8,9:17:44.99:388,45,0	0/0:18,0:18:42.11:0,42,457	0/0:24,0:24:57.15:0,57,630	0/0:19,0:19:36.10:0,36,396	0/0:29,1:30:52.11:0,52,777	0/0:36,0:36:68.81:0,69,948	1/1:5,29:34:89.96:770,90,0	0/0:12,3:15:13.05:0,13,371
chr10	106038040	.	CT	C	2313.54	PASS	AB=0.963;AC=13;AF=0.232;AN=56;BaseQRankSum=10.923;DP=688;FS=8.863;HRun=10;HaplotypeScore=84.8841;InbreedingCoeff=0.8544;MQ=67.97;MQ0=4;MQRankSum=-0.713;QD=14.28;ReadPosRankSum=0.477;VQSLOD=3.2691;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:71.30:0,71,739	1/1:2,7:9:23.92:199,24,0	0/0:33,1:21:32.70:0,33,317	0/1:25,1:14:33.05:33,0,73	0/0:33,1:34:67.19:0,67,961	0/0:23,0:23:56.16:0,56,587	0/0:13,1:14:6.85:0,7,278	1/1:19,8:25:23.41:385,23,0	0/0:15,0:15:42.09:0,42,447	0/0:27,0:27:55.18:0,55,640	0/0:23,1:24:34.05:0,34,584	0/0:22,0:22:57.13:0,57,612	0/0:28,0:27:66.18:0,66,727	0/0:23,0:23:60.12:0,60,633	0/0:32,1:33:54.94:0,55,748	0/0:30,0:30:81.21:0,81,889	0/0:27,0:27:58.33:0,58,630	0/0:23,0:23:30.03:0,30,499	1/1:12,8:17:4.48:230,4,0	1/1:4,26:30:74.86:629,75,0	1/1:5,9:14:29.97:258,30,0	0/0:17,0:17:44.83:0,45,459	0/0:25,0:25:63.16:0,63,689	0/0:13,0:13:33.02:0,33,334	0/0:26,0:26:40.24:0,40,654	0/0:38,0:38:81.20:0,81,877	1/1:4,32:36:89.92:765,90,0	0/0:16,0:16:36.05:0,36,371
chr10	106039373	.	C	CG	4121.20	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-11.138;DP=563;FS=2.378;HRun=2;HaplotypeScore=56.0440;InbreedingCoeff=0.9993;MQ=84.29;MQ0=0;MQRankSum=-1.142;QD=37.13;ReadPosRankSum=0.381;VQSLOD=4.1180;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.18:0,63,765	0/0:15,0:15:45.10:0,45,524	0/0:12,0:12:30.09:0,30,358	0/0:24,0:24:51.03:0,51,690	0/0:26,0:26:72.22:0,72,882	0/0:19,0:19:54.14:0,54,649	0/0:30,0:30:84.23:0,84,1006	1/1:3,19:22:57.16:798,57,0	0/0:19,0:19:54.17:0,54,665	0/0:22,0:22:60.19:0,60,739	0/0:14,0:14:42.13:0,42,516	0/0:21,0:21:63.20:0,63,772	0/0:23,0:23:66.21:0,66,814	0/0:9,0:9:27.08:0,27,332	0/0:14,0:14:39.09:0,39,450	0/0:16,0:16:42.13:0,42,519	0/0:33,0:33:99:0,99,1226	0/0:31,0:31:90.26:0,90,1097	1/1:3,15:18:45.12:588,45,0	1/1:0,10:10:30.09:415,30,0	1/1:1,46:47:99:1768,123,0	0/0:12,0:12:36.07:0,36,425	0/0:14,0:14:37.36:0,37,443	0/0:21,0:21:60.15:0,60,724	0/0:26,0:26:75.23:0,75,924	0/0:20,0:20:53.76:0,54,640	1/1:1,13:14:38.87:553,39,0	0/0:10,0:10:30.09:0,30,371
chr10	106041450	.	G	GTT	3415.37	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=1.984;DP=643;FS=1.765;HRun=12;HaplotypeScore=86.4228;InbreedingCoeff=0.9281;MQ=70.49;MQ0=3;MQRankSum=-0.664;QD=26.48;ReadPosRankSum=-2.754;VQSLOD=3.1531;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:50.67:0,51,627	0/0:9,0:9:25.27:0,25,225	0/0:40,0:22:6.49:0,6,123	0/0:16,0:9:1.91:0,2,49	0/0:34,0:34:54.14:0,54,638	0/0:17,0:17:47.77:0,48,422	0/0:22,0:22:47.20:0,47,423	1/1:7,11:24:35.47:434,35,0	0/0:17,0:20:15.94:0,16,315	0/0:27,0:29:74.68:0,75,721	0/0:16,0:18:29.86:0,30,324	0/0:21,0:23:56.62:0,57,509	0/0:24,0:26:53.81:0,54,535	0/0:14,0:14:35.99:0,36,322	0/0:30,0:34:53.40:0,53,573	0/0:23,0:23:30.30:0,30,415	0/0:26,0:27:74.82:0,75,678	0/0:14,0:14:35.98:0,36,325	1/1:9,21:33:67.77:845,68,0	1/1:4,23:29:50.44:942,50,0	1/1:4,7:11:21.07:295,21,0	0/0:14,0:15:26.15:0,26,260	0/0:26,0:26:40.21:0,40,476	0/0:10,0:10:27.01:0,27,250	0/0:20,0:22:44.84:0,45,456	0/0:26,0:28:68.70:0,69,616	1/1:10,18:32:51.40:899,51,0	0/0:15,0:15:41.80:0,42,374
chr10	106042716	.	CGTGT	C	1719.93	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.014;DP=631;FS=1.874;HRun=0;HaplotypeScore=257.2631;InbreedingCoeff=0.9245;MQ=49.40;MQ0=6;MQRankSum=-3.648;QD=14.45;ReadPosRankSum=1.134;VQSLOD=3.3367;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:45:50.79:0,51,936	1/1:5,0:11:18.02:168,18,0	0/0:18,0:14:13.96:0,14,122	0/0:25,0:15:1.58:0,2,94	0/0:24,0:24:27.09:0,27,663	0/0:16,0:17:36.11:0,36,821	0/0:16,0:16:24.08:0,24,474	1/1:12,4:20:24.02:297,24,0	0/0:21,0:21:42.09:0,42,839	0/0:26,0:27:62.02:0,62,1316	0/0:27,0:28:41.92:0,42,825	0/0:27,0:27:51.09:0,51,980	0/0:24,0:25:36.06:0,36,646	0/0:24,0:24:42.13:0,42,860	0/0:22,0:22:42.13:0,42,832	0/0:22,0:22:33.10:0,33,683	0/0:30,0:29:57.18:0,57,1279	0/0:20,0:20:32.94:0,33,527	1/1:10,9:19:22.88:231,23,0	1/1:7,14:22:39.09:525,39,0	1/1:21,5:25:5.11:69,5,0	0/0:15,0:15:30.07:0,30,601	0/0:23,0:23:36.09:0,36,737	0/0:16,0:18:26.86:0,27,411	0/0:17,0:17:33.11:0,33,655	0/0:31,0:29:65.83:0,66,1005	1/1:2,17:21:43.86:611,44,0	0/0:16,0:16:39.13:0,39,801
chr10	106042730	.	T	TGCGC	579.12	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=0.891;DP=578;FS=9.206;HRun=0;HaplotypeScore=281.8724;InbreedingCoeff=0.4468;MQ=40.10;MQ0=7;MQRankSum=-3.342;QD=5.46;ReadPosRankSum=-0.967;VQSLOD=0.9125;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:54.11:0,54,904	0/0:8,0:8:18.01:0,18,163	0/0:11,0:6:18.03:0,18,232	0/0:20,0:8:14.90:0,15,170	0/0:25,0:25:27.09:0,27,537	0/0:15,0:15:36.12:0,36,703	0/0:17,0:17:30.10:0,30,534	0/1:15,0:15:78.56:273,0,79	0/0:21,0:21:45.11:0,45,744	0/0:22,0:22:63.21:0,63,1193	0/0:28,0:28:42.14:0,42,772	0/0:27,0:27:51.13:0,51,881	0/0:22,0:22:40.44:0,40,598	0/0:19,0:19:45.15:0,45,804	0/0:22,0:22:42.62:0,43,778	0/0:16,0:16:33.11:0,33,634	0/0:30,0:29:57.19:0,57,1090	0/0:17,0:18:35.85:0,36,531	0/1:16,0:15:31.32:198,0,31	1/1:27,0:27:18.51:189,19,0	1/1:13,7:21:5.23:22,5,0	0/0:16,0:16:30.02:0,30,528	0/0:26,0:26:36.09:0,36,594	0/0:18,0:17:27.08:0,27,443	0/0:13,0:13:33.11:0,33,626	0/0:26,0:24:69.19:0,69,1081	0/1:26,0:26:31.16:31,0,38	0/0:14,0:14:39.13:0,39,762
chr10	106042736	.	CGT	C	1322.41	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=6.136;DP=540;FS=11.346;HRun=0;HaplotypeScore=263.5016;InbreedingCoeff=0.6697;MQ=37.71;MQ0=7;MQRankSum=-2.077;QD=8.94;ReadPosRankSum=-0.018;VQSLOD=1.7901;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:3.72:0,4,256	1/1:0,2:8:17.55:103,18,0	0/0:8,0:5:3.01:0,3,43	0/0:17,0:6:3.01:0,3,38	0/0:23,0:23:27.07:0,27,321	0/0:15,0:15:33.08:0,33,379	0/0:18,0:18:17.99:0,18,170	1/1:6,7:13:26.41:270,26,0	0/0:17,0:17:30.04:0,30,321	0/0:21,0:21:2.34:0,2,468	0/1:29,0:29:4.52:5,0,299	0/0:23,0:23:36.02:0,36,388	0/0:23,0:23:17.03:0,17,220	0/0:18,0:18:27.52:0,28,310	0/0:21,0:21:21.06:0,21,247	0/0:14,0:14:24.04:0,24,263	0/0:31,0:30:51.06:0,51,569	0/0:16,0:16:18.67:0,19,155	1/1:8,7:14:26.92:274,27,0	1/1:3,22:26:32.91:330,33,0	1/1:5,10:14:2.12:34,2,0	0/0:15,0:15:21.04:0,21,233	0/0:26,0:26:23.82:0,24,264	0/1:17,0:16:36.31:36,0,121	0/0:14,0:14:18.05:0,18,218	0/0:22,0:20:15.55:0,16,288	1/1:2,23:25:44.73:449,45,0	0/0:15,0:15:39.56:0,40,442
chr10	106042755	.	TTC	T	8677.90	PASS	AB=0.583;AC=42;AF=0.750;AN=56;BaseQRankSum=0.311;DP=576;FS=111.587;HRun=0;HaplotypeScore=263.3267;InbreedingCoeff=-0.2996;MQ=43.14;MQ0=3;MQRankSum=-1.708;QD=15.07;ReadPosRankSum=15.445;VQSLOD=1.5841;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,25:31:35.44:158,0,35	1/1:0,8:8:14.25:164,14,0	0/1:3,3:5:6.20:129,0,6	0/1:9,1:4:34.21:35,0,34	0/1:1,25:26:44.24:230,0,44	1/1:1,18:19:13.24:406,13,0	0/1:5,15:20:21.31:195,0,21	1/1:8,9:17:23.91:341,24,0	1/1:4,15:19:8.87:270,9,0	1/1:6,21:27:70.53:802,71,0	0/1:4,31:35:88.39:167,0,88	0/1:3,23:26:17.28:378,0,17	1/1:1,25:26:24:537,24,0	1/1:2,15:17:26.97:415,27,0	1/1:2,15:17:7.25:255,7,0	0/1:5,11:16:2.61:243,0,3	1/1:3,22:24:41.15:447,41,0	1/1:2,14:16:41.05:498,41,0	1/1:8,9:17:33.74:378,34,0	0/1:4,28:32:24.44:378,0,24	0/1:4,17:21:16.94:81,0,17	0/1:8,16:24:8.72:276,0,9	0/1:6,22:28:51.76:182,0,52	0/1:2,11:13:8.01:8,0,14	0/1:1,16:17:20.11:246,0,20	1/1:5,15:20:42.97:516,43,0	1/1:1,25:26:35.38:548,35,0	1/1:2,15:17:29.50:393,29,0
chr10	106044534	.	AT	A	468	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.423;DP=623;FS=7.068;HRun=1;HaplotypeScore=57.9609;InbreedingCoeff=0.9758;MQ=71.23;MQ0=0;MQRankSum=-0.766;QD=27.53;ReadPosRankSum=-0.559;VQSLOD=2.7524;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1484	1/1:0,17:17:42.09:563,42,0	0/0:12,0:11:13.86:0,14,295	0/0:9,0:8:20.91:0,21,225	0/0:28,0:28:84.24:0,84,1137	0/0:20,0:20:60.17:0,60,818	0/0:16,0:16:48.13:0,48,648	0/0:23,0:23:69.21:0,69,940	0/0:23,0:23:69.15:0,69,888	0/0:23,0:23:69.20:0,69,920	0/0:21,0:21:57.15:0,57,758	0/0:17,0:17:51.11:0,51,656	0/0:26,0:26:78.26:0,78,1107	0/0:17,0:17:51.16:0,51,710	0/0:28,0:28:84.25:0,84,1162	0/0:21,0:21:63.20:0,63,881	0/0:22,0:22:66.20:0,66,921	0/0:23,0:23:66.14:0,66,863	0/0:16,0:16:48.14:0,48,667	0/0:30,0:30:90.21:0,90,1191	0/0:30,0:30:87.23:0,87,1166	0/0:29,0:29:87.25:0,87,1188	0/0:22,0:22:66.19:0,66,904	0/0:17,0:17:51.13:0,51,689	0/0:23,0:23:69.07:0,69,922	0/0:29,0:29:84.26:0,84,1168	0/0:32,0:32:96.31:0,96,1348	0/0:13,0:13:39.09:0,39,517
chr10	106045009	.	CAT	C	2042.95	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.062;DP=725;FS=8.538;HRun=0;HaplotypeScore=90.3397;InbreedingCoeff=0.9883;MQ=65.15;MQ0=10;MQRankSum=-4.708;QD=18.08;ReadPosRankSum=-1.604;VQSLOD=2.6117;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,2471	0/0:7,0:7:15.04:0,15,212	0/0:27,0:21:61.07:0,61,1163	0/0:41,0:35:82.02:0,82,1468	0/0:20,0:20:57.18:0,57,1121	0/0:20,0:20:57.18:0,57,1117	0/0:27,0:27:78.18:0,78,1388	1/1:0,10:9:27.08:411,27,0	0/0:28,0:28:84.24:0,84,1579	0/0:27,0:27:81.27:0,81,1588	0/0:14,0:14:42.13:0,42,814	0/0:35,0:35:99:0,105,2127	0/0:38,0:38:99:0,114,2273	0/0:29,0:29:87.26:0,87,1687	0/0:32,0:32:96.32:0,96,1909	0/0:32,0:32:96.33:0,96,1927	0/0:43,0:43:99:0,129,2573	0/0:24,0:24:69.15:0,69,1253	1/1:2,19:19:44.24:580,44,0	1/1:1,9:9:15.05:244,15,0	1/1:6,37:35:14.79:244,15,0	0/0:16,0:16:48.16:0,48,960	0/0:22,0:22:66.21:0,66,1267	0/0:37,0:37:99:0,105,1939	0/0:12,0:11:36.12:0,36,730	0/0:26,0:26:78.25:0,78,1503	1/1:0,28:27:47.83:738,48,0	0/0:11,0:11:33.10:0,33,630
chr10	106045011	.	T	TGCAC	397.17	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=4.217;DP=717;FS=2.129;HRun=0;HaplotypeScore=126.7729;InbreedingCoeff=0.8914;MQ=63.87;MQ0=10;MQRankSum=-2.114;QD=3.51;ReadPosRankSum=-2.513;VQSLOD=1.8561;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:69.14:0,69,1023	1/1:3,4:7:9.03:218,9,0	0/0:28,0:22:38.13:0,38,558	0/0:39,0:33:43.08:0,43,640	0/0:20,0:20:48.16:0,48,786	0/0:21,0:21:36.09:0,36,536	0/0:26,0:26:57.12:0,57,809	1/1:11,0:10:6.47:54,6,0	0/0:27,0:27:60.16:0,60,904	0/0:27,0:27:51.17:0,51,810	0/0:13,0:13:21.07:0,21,344	0/0:35,0:35:72.23:0,72,1154	0/0:38,0:38:96.33:0,96,1559	0/0:27,0:27:54.17:0,54,857	0/0:31,0:31:63.20:0,63,1005	0/0:31,0:31:63.21:0,63,1025	0/0:43,0:43:84.27:0,84,1344	0/0:22,0:22:54.04:0,54,794	1/1:22,0:20:20.77:199,21,0	./.	0/1:44,0:36:0.07:0,0,0	0/0:16,0:16:30.10:0,30,489	0/0:21,0:21:30.09:0,30,462	0/0:36,0:36:54.12:0,54,806	0/0:12,0:11:24.08:0,24,393	0/0:26,0:26:69.20:0,69,1042	1/1:28,0:27:8.93:68,9,0	0/0:11,0:11:18.04:0,18,269
chr10	106045751	.	TTG	T	251.17	PASS	AB=0.958;AC=12;AF=0.250;AN=48;BaseQRankSum=5.850;DP=714;FS=4.971;HRun=0;HaplotypeScore=114.3192;InbreedingCoeff=-0.1332;MQ=62.46;MQ0=20;MQRankSum=-0.340;QD=0.81;ReadPosRankSum=0.978;VQSLOD=2.0770;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:24.32:0,24,351	0/0:7,0:7:0.56:0,1,32	./.	0/0:25,0:15:0:0,0,0	0/1:28,0:29:26.11:26,0,392	0/0:22,0:22:23.58:0,24,264	0/1:37,0:36:10.33:10,0,172	./.	0/0:14,0:14:9.01:0,9,113	0/0:36,0:34:15.81:0,16,396	0/1:16,0:16:13.66:14,0,169	0/1:26,1:27:50.10:50,0,221	0/1:27,1:28:86:86,0,389	0/1:22,2:24:37.86:38,0,231	0/1:33,0:32:35.18:35,0,408	0/0:32,1:33:12.04:0,12,622	0/1:25,1:25:11.02:11,0,244	0/0:20,0:19:21.60:0,22,266	./.	./.	0/0:43,0:41:2.98:0,3,22	0/0:14,1:15:17.56:0,18,221	0/0:16,0:16:10.41:0,10,215	0/1:32,11:42:18.60:19,0,509	0/1:26,0:26:4.41:4,0,308	0/0:31,0:32:27.67:0,28,271	1/1:20,0:21:19.80:96,20,0	0/0:24,1:22:7.59:0,8,432
chr10	106045795	.	A	ATGTG	242.61	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=6.620;DP=750;FS=3.878;HRun=0;HaplotypeScore=146.4058;InbreedingCoeff=0.0668;MQ=49.15;MQ0=65;MQRankSum=-3.701;QD=1.48;ReadPosRankSum=-2.480;VQSLOD=1.7659;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:66.16:0,66,915	0/1:11,0:11:30.13:30,0,215	0/1:46,0:3:3.49:3,0,38	0/0:39,0:1:2.98:0,3,22	0/0:28,0:27:63.86:0,64,944	0/0:16,0:16:4.65:0,5,334	0/0:42,0:41:64.22:0,64,818	0/1:34,0:25:99:123,0,222	0/0:17,0:17:35.81:0,36,505	0/0:32,0:31:75.24:0,75,1152	0/0:17,0:16:33.10:0,33,497	0/0:27,0:26:66.18:0,66,1005	0/0:34,0:34:87.11:0,87,1202	0/0:19,0:19:54.15:0,54,811	0/0:41,0:39:83.62:0,84,1248	0/0:32,0:32:86.97:0,87,1307	0/0:30,0:28:61.68:0,62,887	0/0:23,0:23:55.73:0,56,835	0/1:19,0:15:99:105,0,113	0/0:13,0:15:2.84:0,3,14	1/1:15,16:31:2.99:25,3,0	0/0:20,0:20:38.76:0,39,509	0/0:15,0:15:36.11:0,36,548	0/0:52,0:52:99:0,99,1481	0/0:17,0:17:39.02:0,39,568	0/0:19,0:19:44.94:0,45,622	0/1:14,0:19:32.53:77,0,33	0/0:20,0:18:46.63:0,47,716
chr10	106045800	.	T	TGAGA	1956.49	PASS	AB=0.691;AC=9;AF=0.161;AN=56;BaseQRankSum=-0.509;DP=752;FS=0.000;HRun=0;HaplotypeScore=144.6495;InbreedingCoeff=0.7196;MQ=49.07;MQ0=65;MQRankSum=-7.868;QD=14.60;ReadPosRankSum=-4.529;VQSLOD=2.4933;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:54.15:0,54,868	0/0:10,0:10:6.92:0,7,336	0/0:48,0:3:5.75:0,6,49	0/0:46,0:2:6.02:0,6,95	0/0:28,0:26:57.14:0,57,874	0/0:16,0:16:41.73:0,42,540	0/0:37,0:36:54.05:0,54,911	0/1:21,14:30:31.46:851,0,31	0/0:18,0:18:36.12:0,36,605	0/0:30,0:29:69.23:0,69,1144	0/0:15,0:14:33.04:0,33,491	0/0:27,0:26:66.12:0,66,1032	0/0:33,0:33:84.24:0,84,1313	0/0:19,0:19:51.17:0,51,853	0/0:37,0:35:83.91:0,84,1333	0/0:32,0:32:63.21:0,63,1060	0/0:29,0:27:60.16:0,60,932	0/0:23,0:23:57.14:0,57,905	1/1:7,13:17:42.04:704,42,0	1/1:7,9:17:2.91:13,3,0	1/1:34,2:33:5.89:126,6,0	0/0:20,0:20:42.14:0,42,702	0/0:16,0:16:39.12:0,39,621	0/0:52,0:52:99:0,102,1652	0/0:17,0:17:39.10:0,39,603	0/0:18,0:18:26.80:0,27,518	1/1:10,11:21:29.86:410,30,0	0/0:19,0:18:39.13:0,39,642
chr10	106048322	.	CA	C	4517.41	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.869;DP=673;FS=23.955;HRun=2;HaplotypeScore=68.9681;InbreedingCoeff=0.9999;MQ=94.79;MQ0=0;MQRankSum=-2.881;QD=35.85;ReadPosRankSum=0.171;VQSLOD=2.8442;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1580	0/0:10,0:10:30.10:0,30,440	0/0:33,0:33:82.71:0,83,1255	0/0:32,0:29:53.31:0,53,912	0/0:20,0:20:54.14:0,54,784	0/0:23,0:23:69.21:0,69,992	0/0:30,0:30:90.29:0,90,1324	1/1:1,26:27:75.24:973,75,0	0/0:19,0:19:57.19:0,57,850	0/0:25,0:25:72.24:0,72,1079	0/0:23,0:23:69.23:0,69,1034	0/0:32,0:32:90.30:0,90,1343	0/0:22,0:22:60.20:0,60,893	0/0:22,0:22:66.21:0,66,961	0/0:29,0:29:81.25:0,81,1164	0/0:29,0:29:87.29:0,87,1303	0/0:19,0:19:57.19:0,57,854	0/0:21,0:21:63.21:0,63,940	1/1:1,21:22:63.20:818,63,0	1/1:1,27:28:72.23:935,72,0	1/1:0,29:29:84.27:1090,84,0	0/0:29,0:29:84.27:0,84,1223	0/0:17,0:17:48.16:0,48,713	0/0:18,0:18:51.15:0,51,726	0/0:17,0:17:51.16:0,51,745	0/0:21,0:21:63.21:0,63,944	1/1:0,20:20:54.18:701,54,0	0/0:18,0:18:54.18:0,54,809
chr10	106053231	.	T	TGA	5541.60	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.115;DP=761;FS=9.685;HRun=0;HaplotypeScore=92.9499;InbreedingCoeff=0.9998;MQ=81.20;MQ0=0;MQRankSum=-1.955;QD=49.48;ReadPosRankSum=-0.786;VQSLOD=4.7562;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:74,0:74:99:0,217,3139	0/0:15,0:15:45.11:0,45,638	0/0:24,0:24:66.20:0,66,931	0/0:17,0:17:51.12:0,51,692	0/0:23,0:23:66.21:0,66,950	0/0:21,0:21:54.18:0,54,793	0/0:39,0:39:99:0,111,1593	1/1:2,19:21:60.19:1091,60,0	0/0:28,0:28:78.25:0,78,1129	0/0:29,0:29:84.26:0,84,1215	0/0:17,0:17:48.16:0,48,706	0/0:27,0:27:81.27:0,81,1192	0/0:26,0:26:78.26:0,78,1147	0/0:34,0:34:99:0,99,1400	0/0:31,0:31:90.30:0,90,1324	0/0:27,0:27:81.26:0,81,1164	0/0:38,0:38:99:0,111,1612	0/0:19,0:19:54.15:0,54,771	1/1:4,7:12:33.09:554,33,0	1/1:2,11:13:33.11:618,33,0	1/1:2,31:34:81.75:1519,82,0	0/0:18,0:18:48.16:0,48,707	0/0:24,0:24:63.21:0,63,926	0/0:41,0:41:99:0,120,1767	0/0:29,0:29:81.26:0,81,1174	0/0:38,0:38:99:0,111,1618	1/1:1,31:32:96.29:1761,96,0	0/0:10,0:10:30.08:0,30,420
chr10	106055412	.	C	CG	230.67	PASS	AC=10;AF=0.200;AN=50;BaseQRankSum=-1.725;DP=246;FS=3.288;HRun=1;HaplotypeScore=34.1777;InbreedingCoeff=0.7624;MQ=91.62;MQ0=6;MQRankSum=-0.231;QD=5.24;ReadPosRankSum=1.693;VQSLOD=0.6900;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:32.55:0,33,277	0/0:5,0:5:11.98:0,12,101	0/0:32,0:23:43.99:0,44,386	0/0:25,0:14:9.09:0,9,100	0/0:9,0:8:18:0,18,156	0/0:6,0:5:11.98:0,12,99	0/0:14,0:14:35.20:0,35,267	1/1:7,0:6:17.74:137,18,0	0/0:11,0:11:29.93:0,30,244	0/0:6,0:6:17.01:0,17,138	0/0:3,0:3:8.97:0,9,72	./.	0/0:6,0:6:14.65:0,15,131	./.	0/0:5,0:5:14.99:0,15,128	0/0:2,0:2:5.90:0,6,41	0/0:16,0:16:44.72:0,45,364	0/0:20,0:20:47.84:0,48,391	1/1:8,0:8:10.01:56,10,0	1/1:4,0:4:11.80:75,12,0	1/1:3,16:19:5.84:49,6,0	0/0:2,0:2:5.99:0,6,51	0/0:3,0:3:5.88:0,6,36	0/0:4,0:4:6:0,6,52	0/0:5,0:5:15.01:0,15,134	0/0:8,0:8:14.67:0,15,132	1/1:6,0:6:3.74:62,4,0	./.
chr10	106059516	.	CT	C	2489.78	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.304;DP=553;FS=29.715;HRun=5;HaplotypeScore=70.7541;InbreedingCoeff=0.9862;MQ=93.58;MQ0=0;MQRankSum=-1.693;QD=25.94;ReadPosRankSum=-3.461;VQSLOD=1.0314;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.23:0,72,967	0/0:4,0:4:9.03:0,9,123	0/0:33,0:31:40.79:0,41,803	0/0:32,0:26:57.01:0,57,738	0/0:21,0:21:54.18:0,54,738	0/0:14,0:14:42.14:0,42,571	0/0:18,0:18:48.15:0,48,641	1/1:3,19:22:57.14:636,57,0	0/0:17,0:17:45.14:0,45,596	0/0:16,0:16:45.14:0,45,600	0/0:17,0:17:51.15:0,51,667	0/0:23,0:23:66.22:0,66,903	0/0:12,0:12:33.10:0,33,437	0/0:26,0:26:72.22:0,72,955	0/0:24,0:24:69.20:0,69,899	0/0:17,0:17:42.13:0,42,560	0/0:25,0:25:72.18:0,72,930	0/0:26,0:26:63.20:0,63,846	1/1:4,23:27:71.66:771,72,0	1/1:0,11:11:30.09:340,30,0	1/1:1,17:18:42.12:476,42,0	0/0:14,0:14:36.11:0,36,477	0/0:12,0:12:30.09:0,30,391	0/0:19,0:19:57.18:0,57,764	0/0:19,0:19:54.14:0,54,705	0/0:24,0:24:60.17:0,60,769	1/1:1,17:18:39.11:442,39,0	0/0:16,0:16:45.15:0,45,616
chr10	106061743	.	TTC	T	226.05	PASS	AB=0.941;AC=13;AF=0.250;AN=52;BaseQRankSum=2.793;DP=589;FS=0.000;HRun=0;HaplotypeScore=82.9650;InbreedingCoeff=-0.2762;MQ=60.76;MQ0=7;MQRankSum=1.270;QD=1.03;ReadPosRankSum=-1.495;VQSLOD=1.4690;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:40.98:0,41,556	0/0:13,0:13:6.85:0,7,48	./.	./.	0/1:11,0:11:4.06:4,0,99	0/0:10,0:10:2.03:0,2,41	0/0:18,0:23:12.02:0,12,140	0/0:43,0:43:18.29:0,18,151	0/1:15,1:16:8.15:8,0,279	0/1:16,0:15:20.98:21,0,85	0/0:17,0:17:15.47:0,15,185	0/1:15,0:15:11.34:11,0,265	0/1:14,1:15:6.87:7,0,269	0/1:8,13:21:1.70:147,0,2	0/0:25,0:26:10.61:0,11,389	0/0:22,1:23:0.16:0,0,415	0/1:18,2:19:59.24:59,0,312	0/0:20,0:19:15.39:0,15,447	0/0:24,0:24:22.77:0,23,262	0/1:17,0:18:3.70:4,0,117	0/0:17,0:17:8.99:0,9,87	0/1:18,0:18:24.88:25,0,133	0/1:12,0:13:40.85:41,0,103	0/1:11,1:12:14.91:15,0,184	0/1:15,1:16:14.89:15,0,200	0/1:27,1:28:1.67:2,0,502	0/0:11,0:25:9.01:0,9,90	0/0:13,0:13:5.94:0,6,87
chr10	106063186	.	CTCAGATACT	C	5682.47	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.574;DP=699;FS=1.522;HRun=0;HaplotypeScore=193.3818;InbreedingCoeff=0.9982;MQ=88.00;MQ0=0;MQRankSum=-11.027;QD=56.82;ReadPosRankSum=-0.816;VQSLOD=4.5525;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,5219	0/0:8,0:8:24.08:0,24,1142	0/0:28,0:28:66.27:0,66,3422	0/0:24,0:24:66.18:0,66,2529	0/0:19,0:19:57.20:0,57,2781	0/0:24,0:24:72.20:0,72,3306	0/0:38,0:38:99:0,108,5041	1/1:2,13:15:39.11:1030,39,0	0/0:22,0:22:66.23:0,66,2984	0/0:22,0:22:60.21:0,60,2715	0/0:11,0:11:30.10:0,30,1471	0/0:27,0:27:78.23:0,78,3599	0/0:32,0:32:96.33:0,96,4469	0/0:28,0:28:84.27:0,84,3965	0/0:29,0:29:81.28:0,81,3874	0/0:23,0:23:69.24:0,69,3146	0/0:40,0:40:99:0,120,5510	0/0:35,0:35:99:0,105,4661	1/1:4,14:18:42.11:1069,42,0	1/1:2,12:14:27.01:656,27,0	1/1:4,32:36:48.10:1376,48,0	0/0:23,0:23:66.18:0,66,3021	0/0:7,0:7:21.07:0,21,989	0/0:37,0:37:99:0,111,4755	0/0:20,0:20:57.20:0,57,2696	0/0:44,0:44:99:0,132,5992	1/1:0,17:17:51.18:1552,51,0	0/0:20,0:20:54.19:0,54,2585
chr10	106064763	.	CA	C	149.64	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.111;DP=435;FS=4.921;HRun=3;HaplotypeScore=60.4758;InbreedingCoeff=0.7818;MQ=58.73;MQ0=1;MQRankSum=-1.194;QD=14.96;ReadPosRankSum=-3.057;VQSLOD=2.0956;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.21:0,69,967	1/1:2,8:9:23.04:242,23,0	0/0:15,0:8:23.94:0,24,304	0/0:13,0:8:7.52:0,8,114	0/0:20,0:20:54.13:0,54,742	0/0:23,0:23:69.23:0,69,987	0/0:16,0:16:48.16:0,48,672	0/0:21,0:21:48.35:0,48,736	0/0:2,0:2:3.01:0,3,39	0/0:16,0:16:42.07:0,42,575	0/0:7,0:7:18.06:0,18,259	0/0:11,0:11:26.98:0,27,375	0/0:11,0:11:33.11:0,33,475	0/0:13,0:13:38.80:0,39,513	0/0:9,0:9:27.08:0,27,364	0/0:8,0:8:24.08:0,24,346	0/0:22,0:22:57.19:0,57,816	0/0:23,0:23:69.22:0,69,967	0/0:21,0:21:27.70:0,28,558	0/0:19,0:19:40.89:0,41,668	0/0:15,0:15:32.47:0,32,494	0/0:8,0:8:24.08:0,24,344	0/0:10,0:10:30.09:0,30,414	0/0:21,0:21:60.20:0,60,846	0/0:19,0:18:57.19:0,57,806	0/0:22,0:22:62.92:0,63,826	0/0:14,0:13:35.49:0,35,554	0/0:21,0:21:60.18:0,60,843
chr10	106064773	.	CA	C	1445.44	PASS	AB=0.882;AC=16;AF=0.286;AN=56;BaseQRankSum=10.878;DP=469;FS=5.997;HRun=12;HaplotypeScore=60.6534;InbreedingCoeff=0.6389;MQ=58.11;MQ0=1;MQRankSum=-0.866;QD=9.03;ReadPosRankSum=0.933;VQSLOD=2.5487;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:30:43.95:0,44,591	1/1:2,1:9:23.08:131,23,0	0/0:9,0:5:6.01:0,6,61	0/1:8,1:5:17.23:17,0,18	0/1:18,4:23:18.76:19,0,338	0/0:25,2:27:11.62:0,12,462	0/1:16,2:18:2.39:2,0,344	1/1:7,13:20:35.93:262,36,0	0/0:7,0:7:15.79:0,16,120	0/0:18,0:18:43.60:0,44,416	0/0:9,0:9:24.01:0,24,224	0/0:16,1:17:15.72:0,16,292	0/0:14,0:15:40.19:0,40,357	0/0:15,1:16:12.63:0,13,277	0/0:11,0:11:30.01:0,30,281	0/0:10,0:10:6.91:0,7,241	0/1:18,3:21:18.58:19,0,358	0/0:21,1:23:37.69:0,38,534	1/1:3,12:16:38.79:299,39,0	1/1:1,14:16:40.85:308,41,0	1/1:0,13:13:35.86:278,36,0	0/0:11,0:11:24.02:0,24,228	0/0:19,0:19:33.61:0,34,440	0/0:17,0:18:41.91:0,42,404	0/0:18,1:19:15.82:0,16,331	0/0:28,0:29:75.86:0,76,689	1/1:1,13:14:38.81:302,39,0	0/0:21,0:21:45.04:0,45,439
chr10	106065303	.	ATTGT	A	10762.64	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=12.443;DP=719;FS=0.469;HRun=0;HaplotypeScore=122.1692;InbreedingCoeff=0.9214;MQ=72.38;MQ0=1;MQRankSum=0.044;QD=22.15;ReadPosRankSum=0.838;VQSLOD=4.5485;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,35:55:64.58:1394,65,0	1/1:0,12:12:33.11:513,33,0	0/0:30,0:23:9.03:0,9,189	0/0:30,0:25:3.01:0,3,43	1/1:6,16:22:48.13:701,48,0	1/1:6,6:12:18.06:280,18,0	1/1:18,15:33:39.13:606,39,0	0/0:32,0:32:21.05:0,21,392	1/1:9,13:22:33.11:513,33,0	1/1:21,9:31:27.06:375,27,0	1/1:11,11:22:30.10:466,30,0	1/1:6,12:18:36.12:559,36,0	1/1:7,9:16:27.09:419,27,0	1/1:10,15:26:39.13:587,39,0	1/1:25,17:42:38.83:606,39,0	1/1:15,13:30:39.12:569,39,0	1/1:16,19:35:51.17:792,51,0	0/0:23,0:23:33.08:0,33,727	0/0:27,0:26:27.09:0,27,636	0/0:26,0:26:4.58:0,5,1059	0/0:39,0:39:16.62:0,17,1318	1/1:9,8:17:27.09:410,27,0	1/1:9,6:15:15.05:233,15,0	1/1:11,16:27:44.25:697,44,0	1/1:2,8:10:15.05:233,15,0	1/1:13,15:28:42.12:622,42,0	0/0:26,0:25:39.13:0,39,917	1/1:7,6:13:12.04:186,12,0
chr10	106066302	.	T	TAAA	9114.40	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-12.632;DP=756;FS=0.713;HRun=1;HaplotypeScore=103.0296;InbreedingCoeff=0.9995;MQ=91.31;MQ0=0;MQRankSum=-5.617;QD=57.32;ReadPosRankSum=-2.168;VQSLOD=4.3854;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,2042	1/1:2,8:10:23.70:482,24,0	0/0:37,0:37:99:0,108,1671	0/0:27,0:27:65.37:0,65,1187	0/0:21,0:21:63.17:0,63,1092	0/0:29,0:29:81.25:0,81,1438	0/0:33,0:33:93.27:0,93,1637	1/1:3,22:28:81.23:1774,81,0	0/0:20,0:20:60.18:0,60,1056	0/0:21,0:21:63.20:0,63,1088	0/0:15,0:15:45.13:0,45,775	0/0:22,0:22:66.16:0,66,1118	0/0:35,0:35:99:0,102,1804	0/0:25,0:25:75.24:0,75,1354	0/0:32,0:32:93.28:0,93,1633	0/0:21,0:21:63.17:0,63,1080	0/0:37,0:37:99:0,108,1888	0/0:34,0:34:99:0,102,1830	1/1:2,19:25:75.18:1610,75,0	1/1:0,29:29:81.19:1847,81,0	1/1:2,31:36:75.16:1737,75,0	0/0:27,0:27:81.24:0,81,1415	0/0:19,0:19:54.17:0,54,974	0/0:29,0:29:87.30:0,87,1620	0/0:15,0:15:39.08:0,39,692	0/0:39,0:39:99:0,111,1882	1/1:2,26:31:72.16:1665,72,0	0/0:21,0:21:63.19:0,63,1121
chr10	106068398	.	C	CTGTT	7993.22	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.689;DP=755;FS=5.197;HRun=0;HaplotypeScore=140.1978;InbreedingCoeff=0.9999;MQ=79.26;MQ0=0;MQRankSum=-15.870;QD=61.96;ReadPosRankSum=-4.105;VQSLOD=5.1364;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,2454	1/1:4,9:13:39.09:877,39,0	0/0:29,0:29:65.96:0,66,1126	0/0:13,0:12:30.10:0,30,518	0/0:18,0:18:54.19:0,54,999	0/0:24,0:24:72.20:0,72,1277	0/0:24,0:24:69.24:0,69,1275	1/1:9,18:27:78.27:2057,78,0	0/0:28,0:28:72.23:0,72,1290	0/0:27,0:27:72.25:0,72,1328	0/0:21,0:21:57.19:0,57,1056	0/0:42,0:42:99:0,114,2067	0/0:40,0:40:99:0,114,2102	0/0:32,0:32:93.32:0,93,1736	0/0:37,0:37:99:0,102,1855	0/0:29,0:29:78.25:0,78,1417	0/0:37,0:37:99:0,105,1944	0/0:20,0:20:60.21:0,60,1102	1/1:9,8:17:42.14:958,42,0	1/1:4,11:15:42.14:954,42,0	1/1:13,14:27:48.06:971,48,0	0/0:19,0:19:51.17:0,51,928	0/0:18,0:18:54.19:0,54,995	0/0:55,0:54:99:0,151,2773	0/0:17,0:17:45.14:0,45,809	0/0:35,0:35:96.33:0,96,1788	1/1:5,25:30:90.31:2175,90,0	0/0:16,0:16:42.02:0,42,598
chr10	106068407	.	CA	C	4112.43	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.999;DP=714;FS=0.386;HRun=1;HaplotypeScore=96.2849;InbreedingCoeff=0.9973;MQ=79.69;MQ0=0;MQRankSum=-14.425;QD=35.45;ReadPosRankSum=-1.264;VQSLOD=3.1211;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,2250	1/1:0,13:13:39.12:510,39,0	0/0:25,0:25:72.21:0,72,989	0/0:15,0:14:39.04:0,39,502	0/0:18,0:18:54.18:0,54,863	0/0:24,0:24:69.19:0,69,1043	0/0:25,0:25:75.26:0,75,1193	1/1:0,24:24:72.24:992,72,0	0/0:27,0:27:81.26:0,81,1271	0/0:27,0:27:81.28:0,81,1292	0/0:20,0:20:60.20:0,60,958	0/0:37,0:37:99:0,111,1727	0/0:36,0:36:99:0,108,1709	0/0:32,0:32:96.33:0,96,1532	0/0:33,0:33:99:0,99,1580	0/0:26,0:26:78.27:0,78,1247	0/0:37,0:37:99:0,111,1766	0/0:21,0:21:60.18:0,60,933	1/1:0,13:13:36.12:499,36,0	1/1:1,13:14:20.57:462,21,0	1/1:0,25:26:18.11:674,18,0	0/0:18,0:18:51.17:0,51,813	0/0:18,0:18:54.18:0,54,863	0/0:52,0:51:99:0,153,2388	0/0:16,0:16:48.16:0,48,765	0/0:33,0:33:96.32:0,96,1514	1/1:0,26:26:59.43:975,59,0	0/0:11,0:11:30.10:0,30,480
chr10	106072179	.	T	TA	1738.46	PASS	AB=0.968;AC=11;AF=0.196;AN=56;BaseQRankSum=-2.422;DP=580;FS=14.327;HRun=1;HaplotypeScore=80.3297;InbreedingCoeff=0.9092;MQ=72.71;MQ0=8;MQRankSum=-0.256;QD=14.37;ReadPosRankSum=-2.512;VQSLOD=1.4124;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,109,1104	0/0:12,0:12:35.17:0,35,212	0/0:41,0:22:6.78:0,7,200	0/1:28,0:16:1.75:2,0,74	0/0:22,0:22:54.89:0,55,555	0/0:25,0:25:47:0,47,521	0/0:21,0:21:54.51:0,55,464	1/1:5,14:19:42.05:428,42,0	0/0:15,0:15:41.96:0,42,418	0/0:16,0:16:35.89:0,36,355	0/0:22,0:23:59.52:0,60,600	0/0:13,0:13:27:0,27,271	0/0:15,0:15:32.69:0,33,403	0/0:10,0:10:20.91:0,21,195	0/0:23,0:23:52.16:0,52,507	0/0:11,0:11:28.29:0,28,314	0/0:31,0:31:78.44:0,78,832	0/0:27,0:27:70.90:0,71,692	1/1:14,2:18:50.25:443,50,0	1/1:10,3:16:38.98:365,39,0	1/1:3,19:23:33.02:361,33,0	0/0:14,0:14:26.82:0,27,261	0/0:23,0:23:54.37:0,54,585	0/0:26,0:27:75.27:0,75,777	0/0:18,0:18:48:0,48,490	0/0:20,0:20:46.16:0,46,434	1/1:8,5:13:35.01:314,35,0	0/0:10,0:10:25.39:0,25,265
chr10	106073330	.	CGGGCGTGT	C	84.74	PASS	AC=4;AF=0.286;AN=14;BaseQRankSum=1.067;DP=241;FS=3.332;HRun=0;HaplotypeScore=13.1524;MQ=14.33;MQ0=206;MQRankSum=-1.067;QD=3.85;ReadPosRankSum=1.067;VQSLOD=0.6434;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	0/0:28,0:1:3.01:0,3,77	./.	0/0:6,0:1:3.01:0,3,117	./.	./.	./.	./.	0/0:4,0:2:3.01:0,3,86	./.	./.	0/0:35,0:2:6.02:0,6,122	0/0:44,0:4:3.01:0,3,86	1/1:11,1:1:3.01:77,3,0	./.	./.	./.	./.	./.	./.	./.	1/1:8,2:5:3.01:85,3,0	./.
chr10	106075114	.	A	AG	2965.25	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.821;DP=681;FS=20.293;HRun=2;HaplotypeScore=92.6821;InbreedingCoeff=0.9936;MQ=85.15;MQ0=1;MQRankSum=-5.215;QD=21.03;ReadPosRankSum=-2.483;VQSLOD=1.9405;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1285	1/1:4,1:5:11.99:117,12,0	0/0:25,0:25:72.16:0,72,859	0/0:29,0:28:77:0,77,888	0/0:13,0:13:36.10:0,36,434	0/0:23,0:23:66.19:0,66,806	0/0:28,0:28:83.75:0,84,1013	1/1:23,1:24:71.41:522,71,0	0/0:21,0:21:63.17:0,63,756	0/0:19,0:19:54.17:0,54,669	0/0:16,0:16:48.14:0,48,582	0/0:26,0:26:78.23:0,78,954	0/0:27,0:27:78.19:0,78,927	0/0:19,0:19:57.18:0,57,706	0/0:35,0:34:99:0,105,1290	0/0:28,0:28:75.22:0,75,917	0/0:26,0:25:75.21:0,75,915	0/0:24,0:24:66.21:0,66,818	1/1:18,0:18:53.71:408,54,0	1/1:11,1:12:35.98:331,36,0	1/1:59,2:61:99:1320,150,0	0/0:20,0:20:60.19:0,60,743	0/0:20,0:20:48.15:0,48,595	0/0:45,0:45:99:0,129,1598	0/0:13,0:13:39.10:0,39,469	0/0:27,0:27:78.24:0,78,967	1/1:21,0:21:50.97:455,51,0	0/0:19,0:19:57.18:0,57,707
chr10	106075116	.	G	GT	6010.49	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-5.814;DP=681;FS=21.045;HRun=0;HaplotypeScore=80.3910;InbreedingCoeff=0.9967;MQ=84.08;MQ0=1;MQRankSum=-4.221;QD=42.63;ReadPosRankSum=-2.890;VQSLOD=2.4122;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1456	1/1:1,4:5:14.98:200,15,0	0/0:25,0:25:72.18:0,72,962	0/0:27,0:27:72.05:0,72,981	0/0:12,0:12:36.12:0,36,502	0/0:23,0:23:66.21:0,66,904	0/0:31,0:31:84.27:0,84,1158	1/1:2,24:26:75.24:1168,75,0	0/0:21,0:21:63.21:0,63,877	0/0:20,0:20:54.18:0,54,755	0/0:17,0:17:48.16:0,48,667	0/0:27,0:27:78.26:0,78,1090	0/0:26,0:26:78.26:0,78,1088	0/0:20,0:20:60.19:0,60,821	0/0:36,0:35:99:0,105,1468	0/0:26,0:26:78.24:0,78,1071	0/0:27,0:26:78.22:0,78,1052	0/0:23,0:23:66.22:0,66,923	1/1:0,19:19:57.16:884,57,0	1/1:2,11:13:36.12:565,36,0	1/1:2,57:59:99:2380,151,0	0/0:20,0:20:60.20:0,60,838	0/0:17,0:17:48.16:0,48,670	0/0:44,0:44:99:0,132,1819	0/0:13,0:13:39.13:0,39,543	0/0:27,0:27:78.25:0,78,1077	1/1:0,19:19:51.17:813,51,0	0/0:19,0:19:57.19:0,57,796
chr10	106075490	.	GA	G	1543.39	PASS	AB=0.923;AC=13;AF=0.232;AN=56;BaseQRankSum=9.866;DP=623;FS=0.831;HRun=12;HaplotypeScore=73.8933;InbreedingCoeff=0.7902;MQ=77.28;MQ0=0;MQRankSum=0.165;QD=10.36;ReadPosRankSum=1.711;VQSLOD=3.2458;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,1:45:77.79:0,78,957	1/1:1,10:11:23.02:184,23,0	0/1:21,2:19:28.88:29,0,62	0/0:20,0:17:12.30:0,12,100	0/0:23,0:26:61.03:0,61,547	0/0:24,0:24:69.07:0,69,676	0/0:23,1:25:15.74:0,16,537	1/1:9,22:31:7.81:427,8,0	0/0:22,2:24:42.79:0,43,572	0/0:32,2:34:26.90:0,27,615	0/0:21,0:21:54.10:0,54,542	0/0:15,0:15:9.84:0,10,259	0/0:25,0:25:48.04:0,48,466	0/0:17,0:17:42.06:0,42,415	0/0:22,1:23:24.82:0,25,423	0/0:24,0:24:12.85:0,13,457	0/0:24,0:25:29.53:0,30,482	0/0:27,2:30:24.46:0,24,577	1/1:3,8:12:22.95:168,23,0	1/1:6,15:23:34.78:257,35,0	1/1:3,24:29:33.40:422,33,0	0/0:21,0:22:47.91:0,48,460	0/0:10,2:12:0.80:0,1,185	0/0:20,2:22:33.83:0,34,509	0/0:11,0:13:3.01:0,3,224	0/0:16,0:18:18.52:0,19,269	1/1:4,13:19:33.61:240,34,0	0/0:9,0:9:26.98:0,27,245
chr10	106076948	.	C	CA	770.11	PASS	AB=0.788;AC=12;AF=0.214;AN=56;BaseQRankSum=1.111;DP=514;FS=5.110;HRun=14;HaplotypeScore=72.6533;InbreedingCoeff=0.3043;MQ=51.97;MQ0=20;MQRankSum=0.834;QD=5.10;ReadPosRankSum=-4.252;VQSLOD=1.2757;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:45:76.06:0,76,474	0/1:6,1:8:9.63:10,0,66	1/1:10,0:3:0.69:10,1,0	0/0:2,0:1:2.22:0,2,7	0/0:16,0:14:17.49:0,17,98	0/1:18,3:22:52.30:52,0,179	0/1:18,4:22:11.74:12,0,187	0/1:12,4:18:31.07:108,0,31	0/0:11,0:12:17.76:0,18,95	0/0:13,0:14:24.06:0,24,129	0/0:13,0:11:17.59:0,18,114	0/0:21,0:20:41.02:0,41,217	0/0:12,0:12:14.40:0,14,94	0/0:13,0:13:20.50:0,21,127	0/0:16,0:17:39.06:0,39,238	0/0:17,0:18:15.48:0,15,160	0/0:38,1:39:66.75:0,67,545	0/0:23,0:19:19.46:0,19,195	0/1:19,8:27:10.54:229,0,11	1/1:6,8:12:26.73:209,27,0	0/1:2,4:6:10.27:44,0,10	0/0:10,0:13:21.68:0,22,126	0/0:14,0:12:19.75:0,20,121	0/0:33,0:30:64.74:0,65,414	0/0:15,0:15:33.29:0,33,197	0/0:23,1:26:25.68:0,26,257	1/1:13,6:20:16.12:254,16,0	0/0:7,0:7:19.73:0,20,118
chr10	106079082	.	CT	C	520.24	PASS	AB=0.821;AC=13;AF=0.232;AN=56;BaseQRankSum=1.276;DP=488;FS=13.412;HRun=11;HaplotypeScore=73.2151;InbreedingCoeff=0.4417;MQ=38.66;MQ0=45;MQRankSum=-5.618;QD=4.48;ReadPosRankSum=2.246;VQSLOD=0.4278;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:48.91:0,49,468	0/1:4,9:13:10.66:125,0,11	0/0:34,0:2:2.99:0,3,24	0/0:43,0:5:5.75:0,6,40	0/0:23,0:23:27.53:0,28,278	0/0:13,0:12:11.94:0,12,102	0/1:12,1:12:2.34:2,0,165	1/1:5,6:8:14.95:123,15,0	0/0:8,0:7:14.83:0,15,103	0/0:26,1:22:17.30:0,17,356	0/0:12,1:13:11.86:0,12,109	0/0:6,0:5:2.98:0,3,22	0/0:9,0:8:8.98:0,9,84	0/0:10,0:9:14.76:0,15,124	0/0:16,1:15:2.37:0,2,209	0/0:11,0:10:21.49:0,21,213	0/0:21,0:17:29.62:0,30,234	0/0:17,0:14:19.05:0,19,153	1/1:12,9:19:25.95:203,26,0	1/1:7,4:11:5.85:49,6,0	1/1:4,3:6:5.99:49,6,0	0/1:10,0:9:0.02:0,0,0	0/0:21,0:16:22.23:0,22,192	0/0:22,0:24:32.42:0,32,307	0/0:16,0:15:11.96:0,12,114	0/0:23,0:22:44.86:0,45,436	0/1:9,8:17:12.81:105,0,13	0/1:10,1:5:12.08:19,0,12
chr10	106079175	.	GTTTTGT	G	547.65	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=5.204;DP=404;FS=7.384;HRun=0;HaplotypeScore=87.4091;InbreedingCoeff=0.6156;MQ=61.01;MQ0=26;MQRankSum=-2.550;QD=9.61;ReadPosRankSum=-1.507;VQSLOD=0.6632;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:51.53:0,52,1058	1/1:3,0:3:7.36:50,7,0	0/0:26,0:6:6.90:0,7,80	0/0:43,0:12:10.94:0,11,146	0/0:21,0:19:39.12:0,39,894	0/0:14,0:14:21.96:0,22,545	0/0:13,0:12:21.04:0,21,376	1/1:6,7:12:17.03:205,17,0	0/0:5,0:5:9.01:0,9,175	0/0:13,0:12:14:0,14,267	0/0:12,0:11:27.08:0,27,514	0/0:11,0:11:17.99:0,18,334	0/0:12,0:11:19.39:0,19,537	0/0:14,0:14:33.02:0,33,725	0/0:12,0:11:21.07:0,21,507	0/0:5,0:5:12.04:0,12,289	0/0:23,0:21:42.03:0,42,1035	0/0:19,0:19:44.79:0,45,1008	1/1:12,0:10:17.76:174,18,0	0/1:13,0:13:30.48:134,0,30	1/1:4,0:2:2.95:19,3,0	0/0:8,0:8:15:0,15,295	0/0:13,0:12:21.07:0,21,430	0/0:12,0:11:23.96:0,24,452	0/0:14,0:13:21.90:0,22,295	0/0:26,0:26:41.03:0,41,787	0/1:12,0:12:99:119,0,129	0/0:3,0:3:9:0,9,137
chr10	106081680	.	GGT	G	770.53	PASS	AB=0.891;AC=24;AF=0.500;AN=48;BaseQRankSum=6.735;DP=597;FS=4.555;HRun=0;HaplotypeScore=72.9732;InbreedingCoeff=-0.0992;MQ=60.03;MQ0=12;MQRankSum=-1.181;QD=2.12;ReadPosRankSum=1.904;VQSLOD=1.1427;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,4:28:46.80:47,0,119	0/0:4,0:4:6:0,6,57	./.	./.	0/1:23,0:23:17.36:17,0,136	0/1:10,5:15:20.41:20,0,55	0/0:25,0:25:18.04:0,18,242	./.	0/1:14,3:17:46.76:47,0,140	0/0:16,0:14:8.99:0,9,107	0/1:12,0:12:23.28:23,0,77	0/0:30,0:30:18.02:0,18,207	1/1:9,6:15:14.91:162,15,0	1/1:11,6:18:14.87:144,15,0	0/1:26,3:28:70.15:70,0,236	0/1:18,1:20:57.17:57,0,135	0/1:27,5:32:45.84:46,0,299	0/1:16,2:18:8.97:9,0,247	1/1:15,0:16:2.84:14,3,0	1/1:10,0:12:2.84:14,3,0	./.	0/0:19,0:19:12.03:0,12,157	0/1:11,0:11:9.16:9,0,152	0/1:26,7:35:99:104,0,198	1/1:15,3:19:5.84:46,6,0	0/0:27,0:27:18:0,18,206	1/1:17,0:22:11.36:56,11,0	0/1:15,3:16:43.75:44,0,185
chr10	106083947	.	T	TACAA	10267.40	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-12.586;DP=753;FS=2.475;HRun=0;HaplotypeScore=118.0848;InbreedingCoeff=0.9994;MQ=88.43;MQ0=0;MQRankSum=-7.431;QD=68.00;ReadPosRankSum=-0.758;VQSLOD=6.8243;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,141,2586	0/0:8,0:8:24.08:0,24,447	0/0:31,0:31:77.47:0,77,1350	0/0:25,0:25:64.46:0,64,1134	0/0:25,0:25:66.23:0,66,1219	0/0:29,0:29:87.27:0,87,1559	0/0:21,0:21:60.19:0,60,1083	1/1:6,22:30:87.28:2178,87,0	0/0:31,0:31:90.31:0,90,1680	0/0:27,0:27:75.26:0,75,1395	0/0:11,0:11:30.10:0,30,560	0/0:37,0:37:99:0,108,2016	0/0:24,0:24:66.23:0,66,1231	0/0:29,0:29:78.27:0,78,1436	0/0:34,0:34:99:0,102,1901	0/0:33,0:33:84.27:0,84,1530	0/0:31,0:31:92.64:0,93,1623	0/0:15,0:15:45.15:0,45,840	1/1:7,12:19:48.61:1204,49,0	1/1:4,19:23:63.13:1559,63,0	1/1:1,42:48:99:3226,126,0	0/0:23,0:23:66.18:0,66,1166	0/0:18,0:18:51.16:0,51,921	0/0:28,0:28:81.28:0,81,1501	0/0:24,0:24:60.20:0,60,1120	0/0:28,0:28:84.29:0,84,1568	1/1:2,28:31:81.25:2100,81,0	0/0:19,0:19:51.13:0,51,886
chr10	106087910	.	AAAGC	A	2144.06	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=15.346;DP=765;FS=0.000;HRun=0;HaplotypeScore=142.6269;InbreedingCoeff=0.1811;MQ=63.70;MQ0=1;MQRankSum=-4.304;QD=13.07;ReadPosRankSum=2.962;VQSLOD=3.2617;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,101,2651	1/1:0,11:11:21.07:384,21,0	0/0:26,0:24:62.07:0,62,1155	0/0:25,0:18:53.79:0,54,838	0/0:35,0:35:90.22:0,90,2203	0/0:21,0:21:62.99:0,63,1137	0/0:29,0:29:81.13:0,81,1521	0/1:20,0:20:99:187,0,185	0/0:23,0:23:66.10:0,66,1303	0/0:30,0:30:90.23:0,90,1915	0/0:30,0:30:90.04:0,90,2050	0/0:27,0:27:78.15:0,78,1550	0/0:23,0:23:44.65:0,45,1506	0/0:25,0:25:72.17:0,72,1664	0/0:32,0:32:84.25:0,84,2001	0/0:26,0:26:72.19:0,72,1697	0/0:32,0:32:96.28:0,96,2246	0/0:28,0:28:33:0,33,1381	0/1:20,0:20:99:181,0,165	0/1:27,0:27:99:378,0,121	0/1:47,0:47:99:477,0,219	0/0:39,0:39:99:0,111,2451	0/0:24,0:24:46.86:0,47,1339	0/0:31,0:31:93.25:0,93,2189	0/0:18,0:18:54.05:0,54,1282	0/0:28,0:28:83.73:0,84,1816	0/1:39,0:39:63.92:675,0,64	0/0:7,0:7:21.02:0,21,456
chr10	106087913	.	GCAAA	G	4635.50	PASS	AB=0.931;AC=13;AF=0.232;AN=56;BaseQRankSum=15.129;DP=756;FS=0.388;HRun=0;HaplotypeScore=134.8505;InbreedingCoeff=0.8202;MQ=63.58;MQ0=1;MQRankSum=-3.885;QD=24.14;ReadPosRankSum=0.276;VQSLOD=4.5696;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,1:43:52.82:0,53,2252	1/1:11,0:11:4.94:194,5,0	0/0:26,0:24:42.08:0,42,852	0/0:24,0:19:35.98:0,36,680	0/0:32,0:32:81.28:0,81,1951	0/0:21,0:21:33.11:0,33,797	0/0:28,0:28:54.16:0,54,1159	1/1:10,11:21:36.01:485,36,0	0/0:22,0:22:45.14:0,45,1045	0/0:30,0:30:63.20:0,63,1496	0/0:31,0:31:78.24:0,78,1784	0/0:28,0:28:63.16:0,63,1320	0/0:21,1:22:7.69:0,8,1242	0/0:24,0:24:60.21:0,60,1454	0/0:30,0:30:81.26:0,81,1809	0/0:22,0:22:60.19:0,60,1390	0/0:32,0:32:87.26:0,87,2020	0/1:25,2:27:41.86:42,0,1084	1/1:8,11:19:33.07:492,33,0	1/1:7,19:26:56.91:857,57,0	1/1:15,31:47:72.17:1135,72,0	0/0:37,0:37:84.29:0,84,1966	0/0:23,1:24:1.64:0,2,980	0/0:31,0:31:78.26:0,78,1803	0/0:18,0:18:45.15:0,45,1103	0/0:29,0:29:66.21:0,66,1492	1/1:7,34:41:87.27:1430,87,0	0/0:7,0:7:15.05:0,15,368
chr10	106088361	.	GGGGC	G	240.38	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.761;DP=490;FS=0.000;HRun=0;HaplotypeScore=79.9344;InbreedingCoeff=0.8886;MQ=77.18;MQ0=0;MQRankSum=-2.460;QD=40.06;ReadPosRankSum=0.058;VQSLOD=3.7553;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.17:0,57,1334	1/1:0,6:6:18.06:331,18,0	0/0:22,0:20:32.20:0,32,873	0/0:14,0:14:32.98:0,33,663	0/0:24,0:24:60.12:0,60,1280	0/0:27,0:27:78.26:0,78,1923	0/0:14,0:14:39.13:0,39,923	0/0:19,0:19:44.78:0,45,909	0/0:15,0:15:42.13:0,42,943	0/0:17,0:17:42.09:0,42,901	0/0:11,0:11:33.11:0,33,809	0/0:15,0:15:45.14:0,45,993	0/0:15,0:15:38.09:0,38,988	0/0:19,0:19:47.43:0,47,1113	0/0:17,0:17:51.17:0,51,1173	0/0:9,0:9:27.09:0,27,638	0/0:34,0:34:93.29:0,93,2241	0/0:14,0:14:42.11:0,42,922	0/0:23,0:23:54.14:0,54,1266	0/0:21,0:21:54.13:0,54,1242	0/0:32,0:32:84.24:0,84,1870	0/0:6,0:6:18.06:0,18,449	0/0:12,0:12:30.09:0,30,746	0/0:26,0:26:75.23:0,75,1754	0/0:14,0:14:36.11:0,36,892	0/0:22,0:22:63.19:0,63,1338	0/0:19,0:19:57.20:0,57,1370	0/0:2,0:2:6.02:0,6,148
chr10	106088637	.	AAAAC	A	172.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.362;DP=516;FS=1.601;HRun=0;HaplotypeScore=83.4651;InbreedingCoeff=0.9441;MQ=65.91;MQ0=2;MQRankSum=0.102;QD=21.51;ReadPosRankSum=-1.269;VQSLOD=3.2670;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,123,3091	1/1:2,6:8:15.05:260,15,0	0/0:16,0:7:12.04:0,12,296	0/0:18,0:17:26.29:0,26,621	0/0:32,0:32:81.28:0,81,1913	0/0:13,0:13:39.13:0,39,991	0/0:17,0:17:51.17:0,51,1254	0/0:37,0:37:93.32:0,93,2285	0/0:14,0:14:39.13:0,39,982	0/0:29,0:28:66.23:0,66,1604	0/0:10,0:10:27.09:0,27,669	0/0:15,0:15:39.13:0,39,956	0/0:15,0:15:42.14:0,42,1067	0/0:17,0:17:36.12:0,36,899	0/0:20,0:19:60.21:0,60,1489	0/0:12,0:12:27.09:0,27,679	0/0:26,0:26:63.22:0,63,1522	0/0:21,0:21:51.14:0,51,1182	0/0:13,0:13:33.11:0,33,799	0/0:18,0:18:42.14:0,42,1058	0/0:18,0:18:45.15:0,45,1143	0/0:11,0:11:24.08:0,24,500	0/0:17,0:17:48.16:0,48,1162	0/0:18,0:18:42.14:0,42,1049	0/0:8,0:8:21.07:0,21,493	0/0:24,0:24:57.20:0,57,1412	0/0:14,0:14:39.09:0,39,824	0/0:10,0:10:27.09:0,27,685
chr10	106090755	.	G	GA	5955.05	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=2.165;DP=629;FS=0.000;HRun=0;HaplotypeScore=64.6230;InbreedingCoeff=0.9961;MQ=81.61;MQ0=0;MQRankSum=-0.314;QD=41.94;ReadPosRankSum=-2.919;VQSLOD=4.1586;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.28:0,96,1285	0/0:5,0:5:15.03:0,15,176	0/0:16,0:16:48.14:0,48,638	0/0:20,0:20:49.06:0,49,688	0/0:19,0:19:57.19:0,57,796	0/0:24,0:24:69.20:0,69,928	0/0:28,0:28:78.25:0,78,1075	1/1:1,37:38:99:1720,111,0	0/0:26,0:26:75.25:0,75,1043	0/0:22,0:22:66.21:0,66,908	0/0:15,0:15:36.12:0,36,503	0/0:28,0:28:75.24:0,75,1033	0/0:13,0:13:39.10:0,39,509	0/0:26,0:26:75.24:0,75,1032	0/0:22,0:22:66.22:0,66,922	0/0:19,0:19:57.19:0,57,793	0/0:33,0:33:90.30:0,90,1255	0/0:25,0:25:63.15:0,63,842	1/1:1,25:26:72.24:1131,72,0	1/1:0,13:13:33.11:527,33,0	1/1:0,42:42:99:1630,102,0	0/0:16,0:16:48.16:0,48,671	0/0:13,0:13:39.12:0,39,517	0/0:27,0:27:75.16:0,75,990	0/0:14,0:14:42.07:0,42,547	0/0:28,0:28:84.25:0,84,1136	1/1:0,22:23:60.20:946,60,0	0/0:12,0:12:36.12:0,36,503
chr10	106091517	.	GGA	G	2986.91	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.485;DP=732;FS=0.874;HRun=0;HaplotypeScore=99.4964;InbreedingCoeff=0.9228;MQ=72.60;MQ0=7;MQRankSum=1.292;QD=26.20;ReadPosRankSum=-0.856;VQSLOD=4.1389;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,105,1711	0/0:11,0:11:30.10:0,30,492	0/0:52,0:29:28.61:0,29,367	0/0:66,0:39:36.19:0,36,516	0/0:28,0:28:72.23:0,72,1150	0/0:18,0:19:36.11:0,36,568	0/0:19,0:19:6.09:0,6,586	1/1:11,19:30:57.04:684,57,0	0/0:30,0:30:78.25:0,78,1250	0/0:29,0:29:63.18:0,63,1003	0/0:12,0:12:27.08:0,27,419	0/0:20,0:20:45.15:0,45,738	0/0:14,0:14:39.12:0,39,614	0/0:29,2:31:0.84:0,1,989	0/0:30,0:30:72.25:0,72,1176	0/0:27,0:27:63.22:0,63,1030	0/0:25,0:25:66.23:0,66,1082	0/0:29,0:29:78.27:0,78,1273	1/1:6,10:16:27.06:320,27,0	1/1:1,14:15:42.13:521,42,0	1/1:2,26:28:69.22:855,69,0	0/0:20,1:21:19.97:0,20,796	0/0:18,0:18:45.15:0,45,733	0/0:29,0:29:69.19:0,69,1075	0/0:23,0:23:57.19:0,57,935	0/0:32,0:32:75.26:0,75,1224	1/1:3,22:25:63.20:781,63,0	0/0:11,0:11:33.11:0,33,533
chr10	106092348	.	ATATTTATTTATTTATTTATT	A	1578.33	PASS	AC=12;AF=0.240;AN=50;BaseQRankSum=7.176;DP=262;FS=1.852;HRun=0;HaplotypeScore=127.8540;InbreedingCoeff=0.5973;MQ=61.55;MQ0=1;MQRankSum=-1.221;QD=16.27;ReadPosRankSum=-4.139;VQSLOD=1.0677;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:15.05:0,15,851	1/1:1,7:8:6.02:319,6,0	./.	./.	0/0:8,0:8:15.05:0,15,1052	0/0:9,0:10:12.04:0,12,836	0/0:2,0:2:3.01:0,3,57	1/1:25,13:37:39.09:607,39,0	0/0:3,0:3:6.02:0,6,559	0/0:14,0:14:15.05:0,15,832	0/0:6,0:6:3.01:0,3,148	0/0:6,0:6:12.03:0,12,717	0/0:2,0:2:3.01:0,3,279	0/0:7,0:7:6.02:0,6,336	0/0:7,0:7:9.03:0,9,346	0/0:3,0:3:3.01:0,3,227	0/0:31,0:30:51.18:0,51,4261	0/0:11,0:11:21.07:0,21,1812	1/1:14,8:21:21.05:582,21,0	1/1:8,0:8:5.94:41,6,0	1/1:9,0:9:2.97:20,3,0	0/0:1,0:1:3.01:0,3,279	./.	0/0:5,0:5:3.01:0,3,183	0/0:11,0:13:9.03:0,9,599	0/0:6,0:6:9.03:0,9,818	1/1:6,6:12:3.01:159,3,0	0/0:12,0:12:21.07:0,21,1475
chr10	106094716	.	GC	G	188.89	PASS	AB=0.600;AC=1;AF=0.018;AN=56;BaseQRankSum=3.825;DP=570;FS=1.555;HRun=1;HaplotypeScore=63.9374;InbreedingCoeff=-0.0182;MQ=93.25;MQ0=0;MQRankSum=-2.426;QD=20.99;ReadPosRankSum=0.978;VQSLOD=3.8211;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1773	0/1:3,6:9:68.59:263,0,69	0/0:23,0:23:63.21:0,63,973	0/0:29,0:29:87.26:0,87,1337	0/0:15,0:15:42.12:0,42,633	0/0:14,0:14:39.11:0,39,596	0/0:27,0:27:81.26:0,81,1263	0/0:25,0:25:69.22:0,69,1056	0/0:22,0:22:63.21:0,63,1006	0/0:18,0:18:54.18:0,54,849	0/0:13,0:13:36.06:0,36,522	0/0:20,0:20:60.16:0,60,925	0/0:27,0:27:81.28:0,81,1291	0/0:15,0:15:42.13:0,42,646	0/0:16,0:16:48.16:0,48,764	0/0:13,0:13:39.13:0,39,620	0/0:26,0:26:78.24:0,78,1202	0/0:20,0:20:57.19:0,57,910	0/0:12,0:12:36.12:0,36,571	0/0:19,0:19:51.17:0,51,802	0/0:26,0:26:69.22:0,69,1076	0/0:13,0:13:39.10:0,39,557	0/0:17,0:17:51.16:0,51,779	0/0:37,0:37:99:0,108,1717	0/0:22,0:22:66.22:0,66,1050	0/0:22,0:22:63.21:0,63,1006	0/0:15,0:15:45.15:0,45,715	0/0:17,0:17:51.17:0,51,804
chr10	106094766	.	C	CTCT	309.23	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.308;DP=533;FS=1.477;HRun=0;HaplotypeScore=104.3632;InbreedingCoeff=0.9604;MQ=84.18;MQ0=0;MQRankSum=-2.731;QD=51.54;ReadPosRankSum=-0.912;VQSLOD=5.5137;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.19:0,66,1065	1/1:1,5:6:18.06:400,18,0	0/0:25,0:25:56.71:0,57,941	0/0:28,0:28:68.07:0,68,1051	0/0:23,0:23:63.17:0,63,983	0/0:25,0:25:69.24:0,69,1162	0/0:23,0:23:60.24:0,60,992	0/0:23,0:23:48.12:0,48,736	0/0:24,0:24:60.19:0,60,984	0/0:16,0:16:48.16:0,48,819	0/0:16,0:16:48.15:0,48,792	0/0:24,0:24:69.19:0,69,1127	0/0:25,0:25:69.21:0,69,1163	0/0:16,0:16:42.11:0,42,686	0/0:12,0:12:36.12:0,36,614	0/0:15,0:15:42.14:0,42,716	0/0:21,0:21:60.16:0,60,989	0/0:18,0:18:51.15:0,51,842	0/0:14,0:14:33.58:0,34,554	0/0:16,0:16:27.09:0,27,410	0/0:10,0:10:11.97:0,12,145	0/0:20,0:20:60.21:0,60,1023	0/0:21,0:21:58.41:0,58,907	0/0:24,0:24:63.19:0,63,1022	0/0:19,0:19:54.18:0,54,918	0/0:18,0:18:51.17:0,51,870	0/0:12,0:12:36.05:0,36,521	0/0:16,0:16:45.15:0,45,767
chr10	106094771	.	TCTGAGCCATCTCACCTCCC	T	2902.02	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.298;DP=525;FS=3.610;HRun=0;HaplotypeScore=261.9410;InbreedingCoeff=0.9280;MQ=82.88;MQ0=0;MQRankSum=-3.916;QD=39.75;ReadPosRankSum=-2.219;VQSLOD=2.6309;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:48.16:0,48,4257	0/0:6,0:6:18.06:0,18,1484	0/0:25,0:25:63.19:0,63,3883	0/0:28,0:28:55.04:0,55,3945	0/0:21,0:21:57.20:0,57,4861	0/0:26,0:26:72.23:0,72,5965	0/0:21,0:21:63.22:0,63,4761	1/1:8,13:21:39.12:991,39,0	0/0:25,0:25:63.22:0,63,5365	0/0:17,0:17:51.18:0,51,4190	0/0:17,0:17:51.17:0,51,3893	0/0:23,0:23:69.22:0,69,5661	0/0:24,0:24:63.22:0,63,5415	0/0:17,0:17:45.15:0,45,4070	0/0:13,0:13:39.13:0,39,3403	0/0:14,0:14:42.14:0,42,3814	0/0:21,0:21:63.22:0,63,5208	0/0:18,0:18:51.18:0,51,4517	1/1:6,7:13:18.03:496,18,0	1/1:5,12:17:27.09:1207,27,0	1/1:9,0:9:3.01:45,3,0	0/0:21,0:21:63.22:0,63,5453	0/0:19,0:19:57.20:0,57,4036	0/0:22,0:22:60.21:0,60,5231	0/0:19,0:19:54.19:0,54,4821	0/0:20,0:20:57.20:0,57,5041	1/1:9,4:13:6.02:323,6,0	0/0:16,0:16:39.13:0,39,3517
chr10	106094790	.	C	CT	568.68	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=4.398;DP=477;FS=0.000;HRun=0;HaplotypeScore=67.4785;InbreedingCoeff=0.7821;MQ=74.74;MQ0=0;MQRankSum=-0.998;QD=14.22;ReadPosRankSum=-3.417;VQSLOD=3.7590;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.18:0,63,844	0/0:8,0:8:18.06:0,18,243	0/0:19,0:19:50.20:0,50,670	0/0:20,0:20:45.07:0,45,547	0/0:19,0:19:57.16:0,57,777	0/0:25,0:25:69.22:0,69,943	0/0:15,0:15:45.14:0,45,612	1/1:15,0:15:26.96:449,27,0	0/0:22,0:22:63.20:0,63,866	0/0:18,0:18:48.11:0,48,633	0/0:14,0:14:42.14:0,42,586	0/0:22,0:22:63.20:0,63,865	0/0:21,0:21:57.17:0,57,776	0/0:17,0:17:45.14:0,45,612	0/0:16,0:16:48.11:0,48,613	0/0:16,0:16:45.11:0,45,607	0/0:22,0:22:66.19:0,66,901	0/0:18,0:18:51.16:0,51,694	1/1:8,0:8:3.92:92,4,0	0/1:12,0:12:1.91:63,0,2	1/1:0,5:5:6.02:96,6,0	0/0:23,0:23:69.23:0,69,965	0/0:16,0:16:45.14:0,45,606	0/0:22,0:22:54.14:0,54,728	0/0:20,0:20:60.19:0,60,813	0/0:23,0:23:69.23:0,69,965	0/0:4,0:4:1.77:0,2,4	0/0:15,0:15:45.12:0,45,609
chr10	106098263	.	C	CACACAT	300.23	PASS	AB=0.920;AC=6;AF=0.107;AN=56;BaseQRankSum=2.749;DP=741;FS=7.435;HRun=0;HaplotypeScore=154.4572;InbreedingCoeff=0.0272;MQ=54.73;MQ0=26;MQRankSum=-4.938;QD=2.08;ReadPosRankSum=-4.033;VQSLOD=0.8617;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:79.89:0,80,1375	0/1:1,11:15:0.13:0,0,0	0/0:30,0:20:47.33:0,47,416	0/0:33,0:15:41.72:0,42,365	0/0:22,0:22:52.53:0,53,707	0/0:17,0:16:44.99:0,45,668	0/0:43,0:43:81.34:0,81,881	0/0:30,0:26:18.58:0,19,433	0/0:26,0:26:51.17:0,51,628	0/0:27,0:27:74.81:0,75,872	0/0:14,0:12:19.98:0,20,178	0/0:34,0:34:88.26:0,88,889	0/0:24,0:23:50.05:0,50,671	0/0:30,0:28:61.77:0,62,614	0/0:27,0:27:63:0,63,927	0/0:26,0:26:66:0,66,886	0/0:30,0:30:42.43:0,42,425	0/1:16,0:13:2.92:3,0,204	0/1:19,0:18:99:289,0,136	0/0:15,0:15:20.92:0,21,168	0/1:60,0:59:12.64:13,0,524	0/0:15,0:14:36.01:0,36,427	0/0:25,0:23:47.57:0,48,568	0/0:39,0:38:96.05:0,96,1174	0/1:13,0:12:2.58:3,0,165	0/0:23,0:22:50.81:0,51,596	0/1:21,0:21:93.97:94,0,173	0/0:15,0:15:20.49:0,20,742
chr10	106103455	.	G	GTTAA	206.65	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=0.556;DP=525;FS=0.000;HRun=0;HaplotypeScore=84.1589;InbreedingCoeff=0.5895;MQ=61.60;MQ0=0;MQRankSum=-2.762;QD=11.48;ReadPosRankSum=-0.879;VQSLOD=2.0881;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,2372	1/1:0,3:4:9.03:260,9,0	0/0:24,0:20:60.21:0,60,1255	0/0:24,0:20:53.89:0,54,1053	0/0:17,0:17:48.16:0,48,991	0/0:22,0:22:63.21:0,63,1284	0/0:11,0:11:33.07:0,33,649	0/0:44,0:43:99:0,120,2366	0/0:13,0:13:36.12:0,36,739	0/0:18,0:18:54.18:0,54,1097	0/0:18,0:18:51.18:0,51,1061	0/0:6,0:6:18.02:0,18,328	0/0:16,0:16:44.84:0,45,881	0/0:13,0:13:39.13:0,39,818	0/0:14,0:14:42.14:0,42,881	0/1:14,0:14:43.83:44,0,716	0/0:22,0:22:60.21:0,60,1256	0/0:21,0:19:42.14:0,42,855	0/0:25,0:25:72.21:0,72,1456	0/0:19,0:19:48.16:0,48,1004	0/0:28,0:28:69.24:0,69,1447	0/0:8,0:8:24.08:0,24,497	0/0:12,0:12:36.12:0,36,741	0/0:24,0:24:63.17:0,63,1270	0/0:12,0:12:33.07:0,33,637	0/0:23,0:23:69.22:0,69,1361	0/0:18,0:17:51.11:0,51,986	0/0:14,0:13:33.08:0,33,599
chr10	106103686	.	TTC	T	213.18	PASS	AB=0.982;AC=19;AF=0.352;AN=54;BaseQRankSum=2.626;DP=398;FS=1.091;HRun=0;HaplotypeScore=56.3334;InbreedingCoeff=0.1591;MQ=60.51;MQ0=27;MQRankSum=0.248;QD=1.64;ReadPosRankSum=1.078;VQSLOD=1.2577;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:29.71:30,0,49	0/0:4,0:4:5.95:0,6,44	0/0:52,0:16:0:0,0,0	0/0:58,0:14:0:0,0,0	0/0:20,0:20:5.95:0,6,43	0/1:15,0:15:5.63:6,0,116	0/0:17,0:15:8.97:0,9,71	./.	0/1:6,1:7:26.75:27,0,39	0/0:12,0:11:8.73:0,9,74	0/0:11,0:11:0:0,0,0	0/0:4,0:4:5.95:0,6,53	0/1:8,0:8:5.75:6,0,114	0/1:7,0:7:6.53:12,0,7	1/1:6,1:5:3.01:33,3,0	1/1:3,2:5:3.01:33,3,0	0/0:22,0:21:17.79:0,18,189	0/0:12,0:15:2.80:0,3,258	1/1:9,0:8:3:25,3,0	0/0:9,0:9:0:0,0,0	1/1:11,0:10:2.99:24,3,0	0/0:5,0:4:3.01:0,3,40	0/0:10,0:10:2.97:0,3,20	0/0:11,0:13:9:0,9,114	0/1:7,0:7:5.21:5,0,35	0/1:13,0:13:25.54:26,0,56	1/1:10,0:10:11.71:89,12,0	1/1:11,0:10:5.38:41,5,0
chr10	106103719	.	TCTCTCTCTCA	T	974.01	PASS	AB=0.611;AC=9;AF=0.161;AN=56;BaseQRankSum=-0.160;DP=350;FS=4.374;HRun=0;HaplotypeScore=91.6296;InbreedingCoeff=0.7338;MQ=48.73;MQ0=17;MQRankSum=0.513;QD=14.98;ReadPosRankSum=-3.920;VQSLOD=0.6142;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:45.02:0,45,898	0/0:4,0:4:6.02:0,6,195	0/0:9,0:2:2.98:0,3,21	0/0:20,0:4:12.01:0,12,113	0/0:16,0:16:29.79:0,30,481	0/0:24,0:24:29.78:0,30,904	0/0:20,0:18:14.54:0,15,718	1/1:18,0:13:23.90:194,24,0	0/0:7,0:6:15:0,15,423	0/0:14,0:13:36.57:0,37,803	0/0:6,0:6:12.50:0,12,227	0/0:6,0:6:12.50:0,12,349	0/0:6,0:6:18.04:0,18,572	0/0:8,0:8:17.68:0,18,283	0/0:12,0:10:17.99:0,18,243	0/0:7,0:7:9.27:0,9,214	0/0:18,0:17:38.88:0,39,971	0/0:21,0:21:57.02:0,57,1563	1/1:12,0:12:29.84:279,30,0	0/1:4,7:11:18.12:28,0,18	1/1:13,0:11:17.45:175,17,0	0/0:6,0:5:12.51:0,13,402	0/0:5,0:5:6.02:0,6,144	0/0:15,0:15:23.97:0,24,609	0/0:8,0:8:15.51:0,16,414	0/0:24,0:24:41.02:0,41,1086	1/1:10,1:10:23.77:460,24,0	0/0:9,0:8:21.05:0,21,575
chr10	106103727	.	TCA	T	602.91	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=0.776;DP=346;FS=9.822;HRun=0;HaplotypeScore=54.4632;InbreedingCoeff=0.4525;MQ=51.81;MQ0=12;MQRankSum=1.269;QD=7.35;ReadPosRankSum=-1.926;VQSLOD=1.3975;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:29.87:0,30,230	0/0:3,0:3:2.70:0,3,44	0/0:6,0:1:2.98:0,3,21	0/0:14,0:6:11.43:0,11,112	0/0:14,0:14:13.83:0,14,162	0/0:21,0:21:12.57:0,13,240	0/0:20,0:18:10.36:0,10,251	1/1:19,0:16:32.90:274,33,0	0/1:7,0:6:4.01:4,0,75	0/0:16,0:15:7.57:0,8,257	0/0:8,0:8:14.88:0,15,110	0/0:7,0:7:11.98:0,12,117	0/0:6,0:6:5.99:0,6,69	0/0:9,0:9:0.34:0,0,82	0/0:12,0:10:9.61:0,10,113	0/0:8,0:8:3.17:0,3,66	0/0:16,0:15:29.62:0,30,275	0/0:22,0:22:15.90:0,16,364	1/1:4,11:15:15.95:231,16,0	0/1:10,0:10:17.97:18,0,18	1/1:12,0:10:14.54:114,15,0	0/0:6,0:5:11.86:0,12,83	0/0:4,0:4:2.97:0,3,20	0/0:15,0:15:20.96:0,21,209	0/1:8,0:8:11:11,0,65	0/0:27,0:27:8.14:0,8,413	1/1:11,0:11:14.87:108,15,0	0/0:9,0:9:11.59:0,12,131
chr10	106104689	.	C	CA	126.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.149;DP=500;FS=0.000;HRun=10;HaplotypeScore=54.7434;InbreedingCoeff=0.6483;MQ=61.04;MQ0=14;MQRankSum=2.434;QD=18.12;ReadPosRankSum=-1.426;VQSLOD=3.6351;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:40:94.59:0,95,749	1/1:1,6:7:21.05:219,21,0	0/0:16,0:8:8.87:0,9,102	0/0:9,0:5:6.50:0,6,52	0/0:28,0:27:56.74:0,57,457	0/0:18,0:16:38.95:0,39,320	0/0:13,0:13:35.91:0,36,290	0/0:28,0:21:59.92:0,60,492	0/0:13,0:13:29.95:0,30,246	0/0:21,0:20:44.90:0,45,364	0/0:22,0:21:44.91:0,45,365	0/0:8,0:7:14.94:0,15,117	0/0:6,0:6:17.94:0,18,142	0/0:8,0:7:11.79:0,12,92	0/0:16,0:15:35.96:0,36,295	0/0:15,0:13:29.92:0,30,241	0/0:24,0:24:59.93:0,60,492	0/0:19,0:19:47.93:0,48,394	0/0:18,0:15:35.94:0,36,295	0/0:19,0:19:41.72:0,42,322	0/0:16,1:17:0.96:0,1,214	0/0:18,0:16:38.95:0,39,320	0/0:22,0:22:53.66:0,54,423	0/0:20,1:21:15.34:0,15,319	0/0:14,1:15:9.96:0,10,286	0/0:27,0:27:74.86:0,75,608	0/0:20,0:20:50.93:0,51,418	0/0:10,0:10:20.96:0,21,172
chr10	106105773	.	C	CAGAG	79.97	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=2.247;DP=585;FS=8.940;HRun=0;HaplotypeScore=108.3349;InbreedingCoeff=0.4158;MQ=58.43;MQ0=16;MQRankSum=-2.197;QD=1.86;ReadPosRankSum=-0.919;VQSLOD=1.0524;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:78.22:0,78,1321	1/1:0,7:8:6.02:158,6,0	0/1:11,0:6:12.34:12,0,92	0/1:23,0:9:2.20:2,0,57	0/0:21,0:20:24.08:0,24,438	0/0:13,0:13:23.57:0,24,314	0/0:35,0:33:74.89:0,75,1332	0/0:34,0:28:69.12:0,69,1050	0/0:19,0:19:51.16:0,51,896	0/0:29,0:25:63.22:0,63,1134	0/0:9,0:9:12.02:0,12,189	0/0:20,0:20:54.16:0,54,922	0/0:21,0:21:45.14:0,45,774	0/0:13,0:13:30.05:0,30,448	0/0:16,0:16:39.12:0,39,672	0/0:24,0:24:59.95:0,60,1051	0/0:16,0:16:42.60:0,43,677	0/0:25,0:26:65.95:0,66,1064	0/0:26,0:18:51.11:0,51,801	0/0:11,0:11:30.10:0,30,528	0/0:38,0:38:99:0,108,1754	0/0:13,0:13:15.05:0,15,251	0/0:11,0:9:11.83:0,12,216	0/0:31,0:31:63.17:0,63,1026	0/0:9,0:9:24.08:0,24,434	0/0:23,0:23:59.65:0,60,970	0/0:35,0:35:87.22:0,87,1449	0/0:16,0:14:39.13:0,39,698
chr10	106106782	.	GCTCTCTCTCTCTCTCTCT	G	358.08	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=0.849;DP=472;FS=0.000;HRun=0;HaplotypeScore=192.9318;InbreedingCoeff=0.6196;MQ=60.88;MQ0=28;MQRankSum=-0.438;QD=5.51;ReadPosRankSum=-0.800;VQSLOD=2.5871;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:37:54.16:0,54,3263	0/0:10,0:9:6.96:0,7,241	0/0:21,0:14:3.01:0,3,71	0/0:30,0:19:13.84:0,14,289	0/0:19,0:18:21.05:0,21,833	0/0:18,0:16:15.94:0,16,839	0/0:22,0:22:27.66:0,28,1479	1/1:23,0:22:6:77,6,0	0/0:14,0:11:12.38:0,12,751	0/0:21,0:22:34:0,34,1596	0/0:6,0:6:9.03:0,9,680	0/0:12,0:10:13.29:0,13,825	0/0:10,0:8:15.05:0,15,811	0/0:10,0:9:15.05:0,15,983	0/0:15,0:15:18.05:0,18,1151	0/0:12,0:12:15.04:0,15,606	0/0:30,0:30:51.18:0,51,3449	0/0:20,0:21:42.11:0,42,2372	1/1:14,2:14:3.52:166,4,0	./.	1/1:19,0:17:6:96,6,0	0/0:9,0:9:12.04:0,12,822	0/0:13,0:11:9.03:0,9,560	0/0:24,0:24:30.10:0,30,1891	0/0:9,0:8:3.01:0,3,224	0/0:20,0:19:36.12:0,36,2335	1/1:6,1:5:3.01:142,3,0	0/0:6,0:6:3.01:0,3,112
chr10	106108017	.	T	TA	1152.59	PASS	AB=0.962;AC=14;AF=0.250;AN=56;BaseQRankSum=-5.332;DP=428;FS=7.577;HRun=13;HaplotypeScore=50.8114;InbreedingCoeff=0.6443;MQ=64.60;MQ0=4;MQRankSum=-0.945;QD=9.69;ReadPosRankSum=-2.117;VQSLOD=1.7200;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:52.42:0,52,353	0/0:0,0:3:6.11:0,6,18	0/1:4,0:3:5.53:6,0,15	0/1:11,0:8:0.89:1,0,15	0/0:18,0:18:17.64:0,18,123	0/0:19,0:19:41.57:0,42,285	0/0:13,0:15:20.05:0,20,143	1/1:8,11:15:27.01:245,27,0	0/0:15,0:16:37.73:0,38,253	0/0:16,0:17:34.70:0,35,232	0/0:8,0:9:19.89:0,20,129	0/0:11,0:11:17.76:0,18,123	0/0:9,0:11:10.75:0,11,67	0/0:12,0:13:31.70:0,32,208	0/0:10,0:10:11.69:0,12,75	0/0:17,0:17:41.59:0,42,286	0/0:30,0:31:77.18:0,77,527	0/0:27,0:28:60.63:0,61,416	1/1:5,13:18:21.28:322,21,0	1/1:3,5:7:12.01:111,12,0	1/1:2,12:14:36.04:334,36,0	0/1:11,1:12:10.82:11,0,84	0/1:10,1:12:14.63:15,0,42	0/0:19,0:19:26.75:0,27,301	0/0:12,0:12:23.66:0,24,164	0/0:10,0:10:20.16:0,20,131	1/1:4,15:20:32.85:285,33,0	0/0:14,0:16:36.76:0,37,238
chr10	106109909	.	GCA	G	1710.81	PASS	AB=0.877;AC=25;AF=0.446;AN=56;BaseQRankSum=9.908;DP=541;FS=8.989;HRun=0;HaplotypeScore=69.1017;InbreedingCoeff=-0.1806;MQ=66.44;MQ0=7;MQRankSum=-0.598;QD=4.32;ReadPosRankSum=-0.112;VQSLOD=1.2577;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,2:22:4.60:0,5,475	0/1:7,1:8:19.45:19,0,167	0/0:28,0:15:6.90:0,7,63	0/0:36,0:25:7.55:0,8,141	0/1:13,3:16:70.33:70,0,336	0/0:15,0:15:33.08:0,33,461	0/1:21,5:30:96.87:97,0,586	1/1:6,6:12:18.03:195,18,0	0/1:20,2:22:32.91:33,0,378	0/1:25,2:27:7.86:8,0,589	0/1:7,1:8:19.57:20,0,135	0/1:16,1:17:1.39:1,0,429	0/1:20,1:22:57.34:57,0,519	0/1:10,1:12:10.45:10,0,258	0/1:13,2:15:1.40:1,0,403	0/1:15,3:18:35.93:36,0,319	0/1:26,5:33:2.63:3,0,669	0/1:24,3:27:8.84:9,0,731	1/1:8,2:10:8.86:83,9,0	0/1:7,7:15:20.25:197,0,20	1/1:10,21:38:65.15:636,65,0	0/1:10,1:11:13.38:13,0,232	0/0:5,0:5:15.02:0,15,185	0/0:27,3:30:13.61:0,14,586	0/1:13,0:13:16.28:16,0,426	0/1:19,4:22:62.56:63,0,268	1/1:7,10:16:27.08:310,27,0	0/0:8,0:8:15.03:0,15,208
chr10	106112088	.	A	AG	337.27	PASS	AB=0.849;AC=8;AF=0.143;AN=56;BaseQRankSum=0.305;DP=548;FS=0.000;HRun=11;HaplotypeScore=91.6815;InbreedingCoeff=0.4391;MQ=79.97;MQ0=1;MQRankSum=0.421;QD=3.07;ReadPosRankSum=-0.599;VQSLOD=0.0288;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:37.53:0,38,241	0/0:5,0:11:9.02:0,9,38	0/0:16,0:16:9.63:0,10,87	0/1:19,0:19:2.32:2,0,30	0/0:8,0:11:21.76:0,22,136	0/0:12,0:12:14.86:0,15,112	0/0:27,0:30:63.75:0,64,468	1/1:15,0:15:6.01:60,6,0	0/0:21,0:22:47.62:0,48,362	0/0:12,0:13:10.94:0,11,74	0/0:12,0:12:14.92:0,15,116	0/0:24,0:24:32.36:0,32,237	0/0:16,0:16:20.79:0,21,157	0/0:24,0:25:46.79:0,47,354	0/0:28,2:30:32.20:0,32,422	0/0:16,0:16:23.90:0,24,186	0/0:31,1:33:64.69:0,65,490	0/0:24,0:27:59.83:0,60,430	0/1:11,0:11:29.06:38,0,29	0/1:6,3:9:7.59:54,0,8	1/1:17,18:34:18.04:183,18,0	0/0:12,0:14:16.90:0,17,116	0/0:11,0:11:14.73:0,15,99	0/0:12,1:13:26.90:0,27,209	0/0:22,0:22:31.75:0,32,222	0/0:30,0:32:45.43:0,45,318	0/1:9,11:20:5.19:134,0,5	0/0:12,0:12:10.66:0,11,134
chr10	106119556	.	A	AT	5990.90	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-14.335;DP=649;FS=0.000;HRun=5;HaplotypeScore=63.7451;InbreedingCoeff=0.9995;MQ=77.43;MQ0=0;MQRankSum=-0.853;QD=34.23;ReadPosRankSum=4.056;VQSLOD=4.9156;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,147,1579	0/0:10,0:10:24.06:0,24,258	0/0:27,0:27:81.10:0,81,850	0/0:23,0:23:41.36:0,41,517	0/0:22,0:22:63.14:0,63,668	0/0:23,0:23:69.17:0,69,742	0/0:31,0:31:87.18:0,87,918	0/0:32,0:32:90.22:0,90,966	1/1:1,23:24:63.04:828,63,0	0/0:13,0:13:33.08:0,33,355	0/0:23,0:23:63.11:0,63,658	1/1:2,19:21:48.16:631,48,0	1/1:1,19:20:54.18:709,54,0	1/1:2,20:22:54.17:704,54,0	0/0:22,0:22:60.12:0,60,634	0/0:20,0:20:51.11:0,51,541	0/0:17,0:17:48.05:0,48,486	0/0:23,0:23:69.13:0,69,723	0/0:22,0:22:60.13:0,60,632	0/0:20,0:20:57.14:0,57,613	0/0:15,0:15:42.11:0,42,451	1/1:0,18:18:51.17:671,51,0	1/1:0,20:20:54.18:710,54,0	1/1:2,30:32:87.28:1145,87,0	1/1:2,16:18:45.15:592,45,0	0/0:34,0:34:90.22:0,90,967	0/0:30,0:30:90.23:0,90,967	0/0:14,0:14:30.05:0,30,312
chr10	106120105	.	T	TG	6504.82	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-13.796;DP=753;FS=2.904;HRun=1;HaplotypeScore=73.0686;InbreedingCoeff=0.9999;MQ=89.75;MQ0=0;MQRankSum=-2.716;QD=41.97;ReadPosRankSum=-2.304;VQSLOD=4.4803;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,1674	0/0:11,0:11:33.09:0,33,413	0/0:33,0:33:81.13:0,81,1041	0/0:23,0:23:63.13:0,63,771	0/0:24,0:24:66.21:0,66,857	0/0:18,0:17:54.16:0,54,686	0/0:37,0:37:99:0,102,1294	1/1:2,23:25:72.23:1054,72,0	0/0:15,0:15:45.13:0,45,570	0/0:25,0:25:75.24:0,75,962	0/0:22,0:22:63.20:0,63,815	0/0:27,0:27:78.25:0,78,1012	0/0:24,0:24:69.22:0,69,895	0/0:25,0:25:75.24:0,75,969	0/0:28,0:28:81.24:0,81,1034	0/0:28,0:28:84.27:0,84,1091	0/0:28,0:28:78.25:0,78,1012	0/0:28,0:28:84.25:0,84,1074	1/1:1,32:33:96.30:1412,96,0	1/1:1,18:19:54.18:802,54,0	1/1:2,52:54:99:2248,151,0	0/0:32,0:32:96.31:0,96,1246	0/0:16,0:16:45.15:0,45,584	0/0:48,0:48:99:0,141,1815	0/0:17,0:17:48.16:0,48,622	0/0:34,0:34:99:0,99,1271	1/1:1,23:24:66.22:989,66,0	0/0:11,0:11:33.11:0,33,428
chr10	106121936	.	T	TGTGTGAAAC	2287.14	PASS	AB=0.714;AC=33;AF=0.971;AN=34;BaseQRankSum=-1.955;DP=52;FS=14.449;HRun=0;HaplotypeScore=19.5546;InbreedingCoeff=-0.1439;MQ=126.24;MQ0=0;MQRankSum=-1.831;QD=46.68;ReadPosRankSum=-0.900;VQSLOD=1.3170;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:3.01:46,3,0	./.	1/1:4,1:6:12.04:400,12,0	0/1:3,0:5:35.21:153,0,35	./.	1/1:1,0:1:3.01:73,3,0	1/1:4,0:4:9.03:216,9,0	1/1:3,0:3:9.02:123,9,0	1/1:2,0:2:6.01:74,6,0	1/1:4,0:4:9.02:145,9,0	./.	1/1:1,0:1:3.01:73,3,0	./.	./.	1/1:1,0:1:3.01:73,3,0	1/1:6,0:6:15.02:222,15,0	1/1:1,0:1:2.98:22,3,0	./.	1/1:1,0:1:3.01:79,3,0	1/1:4,0:4:12:225,12,0	./.	1/1:4,0:4:9.03:196,9,0	1/1:1,0:1:3.01:104,3,0	./.	./.	1/1:2,0:2:6.01:148,6,0	./.	./.
chr10	106122265	.	T	TA	451.02	PASS	AB=0.870;AC=11;AF=0.196;AN=56;BaseQRankSum=-3.322;DP=247;FS=4.403;HRun=11;HaplotypeScore=63.7048;InbreedingCoeff=0.6961;MQ=59.14;MQ0=1;MQRankSum=3.368;QD=9.60;ReadPosRankSum=-3.181;VQSLOD=2.0659;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:23.58:0,24,155	0/0:7,0:7:17.87:0,18,130	0/0:19,0:6:4.22:0,4,47	0/0:6,0:1:2.58:0,3,10	0/0:16,0:15:25.83:0,26,190	0/0:11,0:11:29.77:0,30,219	0/0:6,0:6:5.94:0,6,46	1/1:6,0:6:18.01:163,18,0	0/1:2,0:2:0:0,0,0	0/0:10,0:10:17.01:0,17,132	0/0:10,0:9:17.83:0,18,126	0/0:6,0:6:8.92:0,9,68	0/0:6,0:6:14.69:0,15,105	0/0:4,0:5:7.05:0,7,35	0/1:5,0:5:0:0,0,0	0/0:11,0:11:32.62:0,33,227	0/0:15,0:15:38.62:0,39,276	0/0:18,0:17:32.82:0,33,251	1/1:3,1:4:5.98:48,6,0	1/1:12,2:14:30.06:300,30,0	1/1:5,0:4:8.99:82,9,0	0/0:4,0:3:5.97:0,6,46	0/0:4,0:4:11.93:0,12,88	0/0:5,0:5:8.92:0,9,64	0/0:10,0:9:20.86:0,21,158	0/0:11,0:11:29.84:0,30,224	0/1:4,7:10:0:0,0,0	0/0:8,0:8:14.93:0,15,115
chr10	106123373	.	AT	A	2847.76	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.872;DP=591;FS=3.494;HRun=8;HaplotypeScore=56.4348;InbreedingCoeff=0.9990;MQ=72.31;MQ0=0;MQRankSum=-0.530;QD=25.43;ReadPosRankSum=-1.070;VQSLOD=4.0787;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.29:0,96,1160	1/1:1,9:10:27.04:261,27,0	0/0:16,0:15:32.30:0,32,344	0/0:10,0:9:26.11:0,26,287	0/0:30,0:30:87.25:0,87,1031	0/0:23,0:23:60.18:0,60,724	0/0:11,0:11:33.10:0,33,398	1/1:3,24:27:72.11:695,72,0	0/0:17,0:17:45.14:0,45,544	0/0:30,0:30:78.23:0,78,925	0/0:11,0:11:27.06:0,27,313	0/0:24,0:24:63.19:0,63,761	0/0:25,0:25:63.17:0,63,747	0/0:25,0:25:75.23:0,75,905	0/0:24,0:24:66.20:0,66,797	0/0:31,0:31:75.19:0,75,863	0/0:26,0:26:72.22:0,72,868	0/0:15,0:15:45.14:0,45,544	1/1:2,21:23:63.08:603,63,0	1/1:0,19:19:54.09:521,54,0	1/1:0,12:12:36.06:348,36,0	0/0:18,0:18:48.13:0,48,567	0/0:19,1:20:28.20:0,28,623	0/0:18,0:18:51.16:0,51,616	0/0:21,0:21:57.17:0,57,688	0/0:33,0:33:84.26:0,84,1015	1/1:0,21:21:63.10:608,63,0	0/0:16,0:16:45.14:0,45,540
chr10	106123920	.	C	CT	1811.74	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-7.701;DP=522;FS=9.624;HRun=10;HaplotypeScore=56.2657;InbreedingCoeff=0.9491;MQ=75.57;MQ0=3;MQRankSum=1.434;QD=19.91;ReadPosRankSum=-0.979;VQSLOD=3.8690;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:85.92:0,86,692	1/1:2,3:5:9.02:96,9,0	0/0:20,0:12:2.97:0,3,63	0/0:19,0:17:25.91:0,26,181	0/0:29,0:29:71.88:0,72,588	0/0:17,0:17:38.91:0,39,314	0/0:24,0:24:65.90:0,66,539	1/1:5,19:24:35.46:557,35,0	0/0:15,0:15:35.96:0,36,296	0/0:20,0:20:44.90:0,45,364	0/0:12,0:12:20.95:0,21,172	0/0:19,0:19:50.91:0,51,416	0/0:16,0:16:41.91:0,42,341	0/0:19,0:19:44.91:0,45,364	0/0:27,0:27:62.89:0,63,512	0/0:29,0:29:74.78:0,75,595	0/0:27,1:28:45.91:0,46,584	0/0:18,0:18:47.92:0,48,390	1/1:5,9:13:27.07:288,27,0	1/1:1,10:12:32.90:321,33,0	1/1:3,10:13:27.07:288,27,0	0/0:12,0:12:35.95:0,36,294	0/0:13,0:13:29.94:0,30,246	0/0:19,0:19:50.90:0,51,413	0/0:8,0:8:17.98:0,18,148	0/0:24,0:24:59.88:0,60,487	1/1:5,18:23:42.10:446,42,0	0/0:11,0:11:20.87:0,21,164
chr10	106125672	.	CT	C	2881.88	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.344;DP=494;FS=20.167;HRun=1;HaplotypeScore=57.1187;InbreedingCoeff=0.9980;MQ=80.36;MQ0=0;MQRankSum=-2.259;QD=30.02;ReadPosRankSum=0.340;VQSLOD=1.9614;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:96.80:0,97,1494	1/1:0,11:11:30.10:414,30,0	0/0:15,0:14:37.92:0,38,497	0/0:24,0:24:27.96:0,28,455	0/0:15,0:15:42.09:0,42,549	0/0:23,0:22:63.20:0,63,920	0/0:25,0:25:75.22:0,75,1062	1/1:6,12:15:36:422,36,0	0/0:11,0:11:30.08:0,30,428	0/0:19,0:19:57.15:0,57,787	0/0:13,0:13:39.11:0,39,551	0/0:24,0:24:72.14:0,72,1008	0/0:9,0:9:27.06:0,27,363	0/0:9,0:9:27.01:0,27,356	0/0:27,0:27:72.22:0,72,1027	0/0:17,0:17:48.13:0,48,660	0/0:24,0:24:66.15:0,66,903	0/0:20,0:20:60.13:0,60,826	1/1:1,12:13:35.97:445,36,0	1/1:0,8:8:21.07:289,21,0	1/1:0,29:29:63.07:838,63,0	0/0:15,0:15:45.13:0,45,636	0/0:9,0:9:27.05:0,27,345	0/0:18,0:18:54.18:0,54,804	0/0:13,0:13:32.96:0,33,431	0/0:12,0:12:36.12:0,36,521	1/1:0,17:17:48.16:661,48,0	0/0:18,0:18:51.13:0,51,734
chr10	106126352	.	TATATATATATATATATATATATA	T	68.32	PASS	AB=1.000;AC=3;AF=0.250;AN=12;BaseQRankSum=2.372;DP=49;FS=0.000;HRun=0;HaplotypeScore=63.7534;MQ=80.78;MQ0=10;MQRankSum=1.739;QD=3.42;ReadPosRankSum=-1.212;VQSLOD=0.8654;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/1:11,0:6:13.90:14,0,24	./.	./.	./.	1/1:3,6:8:9.44:133,9,0	./.	./.	./.	./.	./.	./.	./.	./.	0/0:13,0:9:9:0,9,297	0/0:10,0:5:12.04:0,12,579	./.	./.	./.	./.	./.	0/0:1,0:1:3.01:0,3,186	./.	./.	./.	0/0:1,0:1:3.01:0,3,134
chr10	106126373	.	ATATTT	A	153.42	PASS	AB=1.000;AC=11;AF=0.275;AN=40;BaseQRankSum=-1.153;DP=97;FS=0.000;HRun=0;HaplotypeScore=29.8755;InbreedingCoeff=0.5003;MQ=98.70;MQ0=8;MQRankSum=-1.677;QD=3.93;ReadPosRankSum=0.678;VQSLOD=1.0611;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:2,0:2:4.78:0,5,25	0/1:10,0:5:1.50:1,0,39	0/0:16,0:9:12.94:0,13,62	1/1:1,0:1:2.90:16,3,0	./.	0/0:1,0:1:2.37:0,2,8	0/0:11,0:10:22.51:0,23,248	0/0:1,0:1:2.37:0,2,8	./.	./.	1/1:3,0:3:8.20:41,8,0	0/0:2,0:1:0:0,0,0	0/0:1,0:1:0:0,0,0	1/1:2,0:2:5.85:33,6,0	0/0:2,0:2:4.74:0,5,15	1/1:5,9:11:6.02:96,6,0	1/1:9,0:5:8.85:88,9,0	0/0:4,0:4:8.92:0,9,111	0/0:5,0:5:9:0,9,104	./.	./.	./.	0/0:1,0:1:2.60:0,3,10	./.	0/0:2,0:2:4.07:0,4,13	0/0:6,0:5:5.95:0,6,81	0/0:4,0:3:7.65:0,8,32
chr10	106129287	.	CA	C	3795.54	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.515;DP=656;FS=2.735;HRun=5;HaplotypeScore=66.0404;InbreedingCoeff=0.9996;MQ=85.65;MQ0=1;MQRankSum=-1.582;QD=29.65;ReadPosRankSum=-0.169;VQSLOD=4.0891;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1487	0/0:9,0:9:27.09:0,27,369	0/0:27,0:27:69.21:0,69,897	0/0:14,0:14:38.72:0,39,443	0/0:19,0:19:54.14:0,54,716	0/0:30,0:30:87.24:0,87,1149	0/0:21,0:21:60.20:0,60,820	1/1:3,26:29:78.17:853,78,0	0/0:26,0:26:78.25:0,78,1051	0/0:27,0:27:78.25:0,78,1041	0/0:13,0:13:39.11:0,39,503	0/0:26,0:26:78.25:0,78,1050	0/0:26,0:25:69.23:0,69,943	0/0:22,0:22:66.21:0,66,886	0/0:28,0:28:78.24:0,78,1048	0/0:33,0:33:96.30:0,96,1291	0/0:24,0:24:69.20:0,69,910	0/0:23,0:23:63.21:0,63,859	1/1:0,16:16:48.14:544,48,0	1/1:3,16:19:45.06:494,45,0	1/1:0,24:24:63.18:715,63,0	0/0:27,0:27:75.23:0,75,1005	0/0:17,0:17:48.14:0,48,639	0/0:27,0:27:75.18:0,75,973	0/0:12,0:12:30.08:0,30,382	0/0:27,0:27:75.25:0,75,1024	1/1:3,37:40:99:1190,105,0	0/0:12,0:12:36.12:0,36,492
chr10	106130104	.	C	CT	950	PASS	AB=0.912;AC=14;AF=0.250;AN=56;BaseQRankSum=10.544;DP=592;FS=2.525;HRun=12;HaplotypeScore=100.7961;InbreedingCoeff=0.4036;MQ=65.42;MQ0=2;MQRankSum=-8.420;QD=5.69;ReadPosRankSum=-2.851;VQSLOD=2.0146;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:55.96:0,56,394	0/1:2,6:8:0.88:154,0,1	0/1:17,0:14:8.36:8,0,89	0/1:7,0:7:13.26:13,0,36	0/0:28,0:29:56.98:0,57,405	0/0:29,1:32:38.13:0,38,489	0/0:20,1:20:12.84:0,13,270	1/1:28,3:31:4.23:229,4,0	0/0:16,0:16:28.44:0,28,215	0/0:26,0:28:60.68:0,61,427	0/0:20,0:20:14.01:0,14,266	0/0:21,1:22:7.64:0,8,208	0/0:25,1:27:5.74:0,6,178	0/0:13,0:13:11.97:0,12,130	0/0:31,1:34:24.24:0,24,332	0/0:26,0:26:34.18:0,34,352	0/0:14,0:14:5.52:0,6,172	0/1:17,1:19:17.31:17,0,136	0/1:18,0:18:7.69:74,0,8	1/1:23,0:23:50.04:234,50,0	1/1:4,0:4:5.88:42,6,0	0/1:18,1:20:16.17:16,0,144	0/0:20,1:22:13.05:0,13,238	0/0:17,5:22:18.37:0,18,290	0/0:26,0:27:28.07:0,28,300	0/0:24,0:25:41.23:0,41,273	1/1:16,3:20:53.04:328,53,0	0/0:16,0:17:25.67:0,26,305
chr10	106130112	.	T	TTTTTTG	3887.59	PASS	AB=0.932;AC=10;AF=0.179;AN=56;BaseQRankSum=6.567;DP=603;FS=1.960;HRun=0;HaplotypeScore=144.6064;InbreedingCoeff=0.7431;MQ=61.16;MQ0=10;MQRankSum=-8.865;QD=36.68;ReadPosRankSum=-3.007;VQSLOD=2.6496;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:74.68:0,75,1195	0/0:10,0:10:15.65:0,16,202	0/0:15,0:10:6.08:0,6,258	0/1:8,0:7:8.31:8,0,118	0/0:27,0:27:54.28:0,54,1150	0/0:33,0:33:45.73:0,46,1414	0/0:23,0:22:55.30:0,55,851	0/1:27,4:31:6.47:960,0,6	0/0:19,0:19:53.05:0,53,743	0/0:28,0:28:72.13:0,72,1283	0/0:22,0:22:56:0,56,887	0/0:21,0:21:47.97:0,48,778	0/0:25,0:25:50.85:0,51,702	0/0:13,0:13:33.02:0,33,508	0/0:33,0:33:78.58:0,79,1239	0/0:21,0:21:60.04:0,60,1034	0/0:14,0:13:39.13:0,39,695	0/0:18,0:18:19.84:0,20,582	1/1:16,1:17:29.25:474,29,0	1/1:13,10:23:62.51:1224,63,0	1/1:2,1:3:6.02:162,6,0	0/0:23,0:23:46.90:0,47,667	0/0:24,0:23:52.74:0,53,745	0/0:26,0:25:60.14:0,60,1010	0/0:28,0:28:65.06:0,65,976	0/0:25,0:25:57.74:0,58,878	1/1:18,3:21:62.95:1060,63,0	0/0:17,0:17:29.08:0,29,832
chr10	106130115	.	TTG	T	353.50	PASS	AB=0.914;AC=7;AF=0.125;AN=56;BaseQRankSum=5.255;DP=600;FS=29.526;HRun=0;HaplotypeScore=101.9082;InbreedingCoeff=-0.1335;MQ=61.74;MQ0=11;MQRankSum=-1.219;QD=2.81;ReadPosRankSum=-3.610;VQSLOD=-0.4041;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:76.79:0,77,979	0/0:9,0:9:26.16:0,26,241	0/1:16,0:11:35.16:35,0,155	0/1:9,0:7:9.87:10,0,66	0/0:27,0:27:22.16:0,22,910	0/0:32,0:32:45.70:0,46,1197	0/0:24,0:23:56.48:0,56,854	0/1:31,1:31:99:154,0,347	0/0:19,0:19:40.06:0,40,614	0/0:28,0:28:71.88:0,72,1011	0/0:22,0:22:29.04:0,29,673	0/0:21,0:21:53.86:0,54,646	0/0:25,0:25:54.17:0,54,608	0/0:14,0:13:29.21:0,29,379	0/0:31,0:31:61.27:0,61,1001	0/0:21,0:21:60.12:0,60,915	0/0:14,0:13:35.70:0,36,468	0/0:17,0:17:22.19:0,22,499	0/1:17,1:17:19.92:20,0,255	0/1:26,0:25:35.24:35,0,403	0/1:1,2:3:16.06:24,0,16	0/0:23,0:23:57.33:0,57,659	0/0:21,0:20:34.33:0,34,571	0/0:26,0:25:59.91:0,60,794	0/0:25,0:25:67.56:0,68,869	0/0:26,0:26:27.83:0,28,726	0/1:19,3:22:99:204,0,233	0/0:17,0:17:29.02:0,29,677
chr10	106130120	.	C	CT	1334.87	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=9.733;DP=567;FS=6.753;HRun=7;HaplotypeScore=86.8489;InbreedingCoeff=0.8063;MQ=60.99;MQ0=11;MQRankSum=-8.460;QD=12.71;ReadPosRankSum=-3.922;VQSLOD=2.1218;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:57.03:0,57,543	0/0:8,0:8:18.02:0,18,174	0/0:14,0:10:18.73:0,19,168	0/1:8,0:6:15.34:15,0,50	0/0:26,0:26:57.07:0,57,550	0/0:26,0:26:66.08:0,66,631	0/0:23,0:22:47.94:0,48,456	1/1:17,10:26:4.58:372,5,0	0/0:18,0:18:41.52:0,42,392	0/0:23,0:23:60.09:0,60,578	0/0:22,0:22:41.63:0,42,427	0/0:20,0:20:32.98:0,33,317	0/0:21,0:21:32.15:0,32,316	0/0:14,0:13:20.73:0,21,201	0/0:30,0:30:63.03:0,63,608	0/0:21,0:21:51.05:0,51,484	0/0:16,0:15:27.49:0,27,274	0/0:17,0:17:35.72:0,36,329	1/1:9,9:17:19.12:315,19,0	1/1:10,16:26:41.96:485,42,0	1/1:2,1:3:3.01:36,3,0	0/0:21,0:21:47.68:0,48,462	0/0:19,0:18:23.85:0,24,232	0/0:27,0:26:56.06:0,56,544	0/0:23,0:23:32.86:0,33,318	0/0:25,0:25:45.04:0,45,433	1/1:14,8:22:17.14:275,17,0	0/0:18,0:18:35.99:0,36,329
chr10	106133483	.	T	TA	3935.69	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-10.640;DP=628;FS=4.365;HRun=9;HaplotypeScore=62.7215;InbreedingCoeff=0.9228;MQ=73.87;MQ0=0;MQRankSum=-0.208;QD=25.89;ReadPosRankSum=-3.151;VQSLOD=3.1827;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:68.98:0,69,599	1/1:2,9:11:18.01:179,18,0	0/0:16,0:17:1.94:0,2,183	0/0:12,0:11:5.53:0,6,144	0/0:24,0:24:56.96:0,57,489	0/0:34,0:34:92.95:0,93,803	0/0:24,0:24:59.97:0,60,521	1/1:9,34:44:99:1076,102,0	0/0:20,0:20:56.98:0,57,495	0/0:18,0:18:44.99:0,45,390	0/0:21,0:21:59.98:0,60,521	0/0:30,0:30:83.98:0,84,729	0/0:21,0:21:53.97:0,54,465	0/0:18,0:18:23.60:0,24,366	0/0:20,2:22:23.81:0,24,436	0/0:25,0:25:41.56:0,42,515	0/0:23,0:24:58.99:0,59,497	0/0:21,0:21:59.99:0,60,521	1/1:5,21:26:66.13:707,66,0	1/1:2,22:25:68.99:732,69,0	1/1:2,23:25:66.18:730,66,0	0/0:16,1:17:8.78:0,9,302	0/0:20,1:21:20.80:0,21,409	0/0:20,0:20:59.99:0,60,521	0/0:10,0:10:29.99:0,30,260	0/0:27,0:27:68.96:0,69,595	1/1:2,18:20:47.96:512,48,0	0/0:25,0:26:74.01:0,74,630
chr10	106133778	.	GA	G	580.57	PASS	AB=0.750;AC=9;AF=0.167;AN=54;BaseQRankSum=2.373;DP=508;FS=6.867;HRun=8;HaplotypeScore=93.5113;InbreedingCoeff=0.4626;MQ=51.84;MQ0=16;MQRankSum=-3.785;QD=5.69;ReadPosRankSum=-0.240;VQSLOD=0.6830;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:56.81:0,57,624	1/1:3,6:9:14.81:144,15,0	./.	0/1:19,0:2:0:0,0,0	0/0:23,0:23:45.06:0,45,514	0/0:12,0:12:23.28:0,23,261	0/0:9,0:8:6.02:0,6,72	0/1:12,9:21:60.53:204,0,61	0/0:11,0:11:26.06:0,26,289	0/0:17,0:17:44.89:0,45,495	0/0:14,0:14:26.91:0,27,304	0/0:22,0:22:40.59:0,41,406	0/0:18,0:18:30.05:0,30,346	0/0:22,0:22:42.94:0,43,478	0/0:18,0:18:34.03:0,34,360	0/0:31,0:31:65.84:0,66,696	0/0:49,0:49:80.94:0,81,920	0/0:21,0:21:19:0,19,408	1/1:7,4:10:11.05:117,11,0	0/1:4,5:9:11.74:72,0,12	0/1:4,2:5:2.16:24,0,2	0/0:12,0:13:32.14:0,32,348	0/0:11,0:11:27.08:0,27,325	0/0:19,1:20:39.01:0,39,409	0/0:12,0:12:24.02:0,24,263	0/0:20,0:20:42.85:0,43,474	0/1:13,14:24:61.49:160,0,61	0/0:12,0:12:22.25:0,22,243
chr10	106133963	.	C	CG	57.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.071;DP=526;FS=8.564;HRun=0;HaplotypeScore=61.6424;InbreedingCoeff=0.9035;MQ=56.76;MQ0=2;MQRankSum=-0.223;QD=14.38;ReadPosRankSum=-1.390;VQSLOD=4.1158;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.14:0,57,756	1/1:0,4:4:9.03:141,9,0	0/0:16,0:9:19.58:0,20,252	0/0:10,0:9:12.73:0,13,223	0/0:23,0:23:66.20:0,66,891	0/0:10,0:10:30.10:0,30,419	0/0:20,0:19:54.18:0,54,754	0/0:42,0:42:99:0,117,1615	0/0:14,0:14:42.14:0,42,582	0/0:20,0:20:60.18:0,60,798	0/0:12,0:12:36.11:0,36,485	0/0:22,0:22:57.18:0,57,769	0/0:19,0:19:54.18:0,54,747	0/0:17,0:17:42.13:0,42,544	0/0:18,0:18:51.17:0,51,712	0/0:26,0:26:78.23:0,78,1050	0/0:29,0:29:81.07:0,81,1060	0/0:19,0:19:54.13:0,54,705	0/0:22,0:21:51.17:0,51,711	0/0:23,0:23:66.22:0,66,920	0/0:17,0:17:51.17:0,51,704	0/0:12,0:12:36.10:0,36,462	0/0:23,0:23:69.23:0,69,955	0/0:17,0:17:45.15:0,45,618	0/0:11,0:11:33.10:0,33,445	0/0:26,0:26:75.24:0,75,1021	0/0:25,0:25:72.24:0,72,1005	0/0:7,0:7:21.07:0,21,294
chr10	106134592	.	GA	G	863.20	PASS	AB=0.785;AC=14;AF=0.250;AN=56;BaseQRankSum=6.816;DP=585;FS=9.044;HRun=15;HaplotypeScore=70.8680;InbreedingCoeff=0.4113;MQ=60.42;MQ0=0;MQRankSum=1.774;QD=4.38;ReadPosRankSum=2.188;VQSLOD=1.0708;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,2:24:13.16:13,0,233	1/1:3,0:13:16.21:47,16,0	0/0:24,0:13:14.94:0,15,119	0/0:9,0:6:5.83:0,6,37	0/0:26,2:29:20.29:0,20,393	0/0:14,2:16:0.35:0,0,234	0/1:9,2:11:14.55:15,0,129	0/1:13,19:36:11.60:282,0,12	0/0:8,0:8:19.54:0,20,159	0/0:11,1:13:10.71:0,11,214	0/0:21,0:24:48.98:0,49,386	0/0:20,0:21:44.09:0,44,397	0/0:18,1:20:18.10:0,18,255	0/0:29,0:29:44.94:0,45,491	0/0:32,0:33:35.93:0,36,505	0/0:34,0:34:71.76:0,72,602	0/0:27,2:29:32.16:0,32,395	0/0:10,0:10:18.84:0,19,150	1/1:6,8:14:3.17:146,3,0	0/1:8,8:18:1.83:96,0,2	1/1:2,6:8:17.73:115,18,0	0/0:19,0:23:50.78:0,51,425	0/1:17,3:20:24.82:25,0,176	0/0:18,0:20:50.65:0,51,416	0/0:29,1:30:30.70:0,31,474	0/1:24,2:29:2.18:2,0,289	1/1:8,16:24:44.22:288,44,0	0/0:14,2:16:13.46:0,13,226
chr10	106135989	.	CTG	C	240.16	PASS	AB=0.850;AC=5;AF=0.093;AN=54;BaseQRankSum=7.688;DP=511;FS=24.902;HRun=0;HaplotypeScore=73.4785;InbreedingCoeff=0.2861;MQ=57.16;MQ0=15;MQRankSum=-1.242;QD=2.96;ReadPosRankSum=2.976;VQSLOD=0.2817;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:38.48:0,38,627	0/1:3,1:3:11.36:11,0,22	0/0:14,0:8:18.97:0,19,223	0/0:14,0:6:12.51:0,13,171	0/0:9,0:9:27.09:0,27,519	0/0:13,0:13:36.12:0,36,680	0/0:28,0:28:81.24:0,81,1510	0/0:10,1:10:5.42:0,5,138	0/0:24,0:24:72.18:0,72,1296	0/0:8,0:8:21.07:0,21,380	0/0:5,0:3:9.03:0,9,166	0/0:53,0:51:99:0,148,2702	0/0:23,0:23:69.22:0,69,1239	0/0:26,0:26:72.25:0,72,1387	0/0:24,0:24:69.24:0,69,1330	0/0:28,0:28:84.25:0,84,1516	0/0:45,0:45:99:0,129,2421	0/0:15,0:15:45.15:0,45,908	0/1:16,2:12:25.53:26,0,159	./.	0/1:37,8:42:99:127,0,432	0/0:9,0:9:24.08:0,24,418	0/0:4,0:4:12.03:0,12,190	0/0:24,0:23:66.23:0,66,1238	0/0:9,0:9:21.07:0,21,358	0/0:16,0:14:39.13:0,39,729	1/1:3,11:14:13.10:193,13,0	0/0:12,0:12:36.11:0,36,674
chr10	106135992	.	CCT	C	202.24	PASS	AB=0.866;AC=5;AF=0.089;AN=56;BaseQRankSum=7.565;DP=521;FS=20.625;HRun=0;HaplotypeScore=72.6817;InbreedingCoeff=0.2840;MQ=56.79;MQ0=15;MQRankSum=-0.328;QD=2.35;ReadPosRankSum=3.672;VQSLOD=-0.0177;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:41.97:0,42,710	0/1:4,1:4:8.52:9,0,32	0/0:14,0:8:17.18:0,17,216	0/0:17,0:8:18.51:0,19,254	0/0:10,0:10:30.10:0,30,574	0/0:17,0:17:45.15:0,45,818	0/0:29,0:29:84.26:0,84,1578	0/0:10,1:10:9.26:0,9,170	0/0:26,0:26:78.23:0,78,1376	0/0:9,0:9:27.09:0,27,477	0/0:5,0:3:9.03:0,9,166	0/0:55,0:53:99:0,151,2726	0/0:22,0:22:66.23:0,66,1242	0/0:28,0:28:78.24:0,78,1434	0/0:23,0:23:69.24:0,69,1330	0/0:25,0:25:75.26:0,75,1435	0/0:43,0:43:99:0,126,2382	0/0:15,0:15:45.15:0,45,910	0/1:17,2:13:25.40:25,0,160	0/0:2,0:1:1.82:0,2,5	0/1:41,8:46:99:117,0,478	0/0:8,0:8:24.08:0,24,419	0/0:2,0:2:6.02:0,6,121	0/0:24,0:23:66.23:0,66,1238	0/0:9,0:9:21.07:0,21,373	0/0:16,0:14:39.13:0,39,738	1/1:2,11:13:9.43:165,9,0	0/0:11,0:11:33.11:0,33,651
chr10	106136356	.	TAC	T	338.98	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.994;DP=690;FS=9.433;HRun=0;HaplotypeScore=82.2342;InbreedingCoeff=0.9984;MQ=81.37;MQ0=0;MQRankSum=-1.048;QD=33.90;ReadPosRankSum=0.547;VQSLOD=5.2913;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,154,2949	1/1:0,10:10:30.06:433,30,0	0/0:34,0:33:96.06:0,96,1756	0/0:20,0:19:51.11:0,51,912	0/0:15,0:15:45.15:0,45,859	0/0:34,0:34:99:0,102,1949	0/0:27,0:27:78.27:0,78,1506	0/0:31,0:31:93.32:0,93,1797	0/0:15,0:15:45.15:0,45,869	0/0:27,0:27:81.28:0,81,1553	0/0:15,0:15:45.15:0,45,869	0/0:33,0:33:96.31:0,96,1802	0/0:23,0:23:69.24:0,69,1322	0/0:29,0:29:87.30:0,87,1668	0/0:27,0:27:78.27:0,78,1495	0/0:29,0:29:87.30:0,87,1681	0/0:25,0:25:75.26:0,75,1438	0/0:24,0:24:72.20:0,72,1351	0/0:21,0:21:57.20:0,57,1101	0/0:9,0:9:27.09:0,27,521	0/0:38,0:38:99:0,114,2168	0/0:20,0:20:57.20:0,57,1101	0/0:15,0:15:42.14:0,42,802	0/0:27,0:27:75.26:0,75,1449	0/0:20,0:20:60.21:0,60,1159	0/0:28,0:28:81.24:0,81,1469	0/0:24,0:24:69.24:0,69,1331	0/0:18,0:18:54.19:0,54,1041
chr10	106137673	.	G	GTTA	197.64	PASS	AB=0.938;AC=14;AF=0.700;AN=20;BaseQRankSum=-0.817;DP=27;FS=3.802;HRun=0;HaplotypeScore=18.3743;InbreedingCoeff=0.2808;MQ=137.01;MQ0=0;MQRankSum=-2.163;QD=10.98;ReadPosRankSum=0.978;VQSLOD=2.0267;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,1:2:6.01:72,6,0	./.	0/1:2,1:3:49.87:57,0,50	0/0:5,0:5:11.09:0,11,62	./.	1/1:1,1:2:3.90:50,4,0	1/1:5,1:6:5.91:51,6,0	./.	./.	0/1:1,0:1:0:0,0,0	./.	./.	./.	./.	0/1:1,0:1:0:0,0,0	0/1:1,0:1:0:0,0,0	1/1:0,1:1:3.01:50,3,0	./.	./.	./.	./.	./.	1/1:1,0:1:0.47:1,0,0	./.	./.	./.	./.	./.
chr10	106137686	.	T	TAGAG	1191.51	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=-5.804;DP=141;FS=0.000;HRun=0;HaplotypeScore=29.8118;InbreedingCoeff=0.6546;MQ=98.59;MQ0=0;MQRankSum=-2.395;QD=49.65;ReadPosRankSum=-0.821;VQSLOD=3.0616;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:33.08:0,33,509	./.	0/0:8,0:8:18.04:0,18,281	0/0:10,0:10:27.05:0,27,440	0/0:3,0:3:9.03:0,9,131	0/0:8,0:8:24.08:0,24,457	0/0:9,0:9:24.06:0,24,402	1/1:1,9:11:30.09:698,30,0	0/0:2,0:2:6.02:0,6,97	0/0:1,0:1:3.01:0,3,58	0/0:4,0:4:12.04:0,12,190	0/0:6,0:6:15.03:0,15,216	0/0:3,0:3:9.03:0,9,173	0/0:3,0:3:9.03:0,9,173	0/0:5,0:5:15.04:0,15,236	0/0:4,0:4:12.04:0,12,232	0/0:7,0:7:17.91:0,18,291	0/0:3,0:3:8.99:0,9,115	1/1:0,5:5:15.05:313,15,0	1/1:0,1:1:3.01:82,3,0	1/1:0,3:4:3.01:82,3,0	0/0:1,0:1:3.01:0,3,50	0/0:5,0:5:9.03:0,9,153	0/0:12,0:12:6:0,6,82	0/0:3,0:3:6.02:0,6,90	0/0:5,0:5:15.05:0,15,266	1/1:0,3:3:6.02:163,6,0	0/0:3,0:3:9.03:0,9,155
chr10	106138015	.	G	GA	1221.82	PASS	AB=0.971;AC=11;AF=0.196;AN=56;BaseQRankSum=-1.990;DP=477;FS=10.357;HRun=6;HaplotypeScore=72.8540;InbreedingCoeff=0.8452;MQ=66.48;MQ0=14;MQRankSum=-0.826;QD=9.12;ReadPosRankSum=0.380;VQSLOD=0.3932;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:48.67:0,49,465	0/0:1,0:1:2.22:0,2,7	0/0:50,0:20:20.81:0,21,262	0/1:65,0:23:1.08:1,0,177	0/0:9,0:9:11.99:0,12,112	0/0:12,0:12:35.21:0,35,305	0/0:11,0:11:20.52:0,21,185	1/1:3,12:16:33.62:313,34,0	0/0:9,0:9:20.95:0,21,181	0/0:9,0:9:18.22:0,18,226	0/0:8,0:8:23.88:0,24,216	0/0:23,0:23:56.08:0,56,478	0/0:16,0:16:32.67:0,33,287	0/0:16,0:16:35.13:0,35,298	0/0:17,1:18:33.20:0,33,378	0/0:16,0:15:37.41:0,37,346	0/0:32,1:32:79.44:0,79,684	0/0:27,0:27:72.35:0,72,565	1/1:6,12:18:35.46:371,35,0	1/1:2,7:9:18.05:215,18,0	1/1:7,6:12:18.05:212,18,0	0/0:7,0:7:20.98:0,21,193	0/0:9,0:9:18.03:0,18,181	0/0:11,0:11:7.13:0,7,142	0/0:3,0:3:8.61:0,9,71	0/0:12,0:12:26.82:0,27,221	1/1:5,6:11:24.03:280,24,0	0/0:9,0:8:10.78:0,11,177
chr10	106138943	.	C	CT	2020.82	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=-6.910;DP=588;FS=1.447;HRun=11;HaplotypeScore=62.6613;InbreedingCoeff=0.8437;MQ=71.50;MQ0=2;MQRankSum=1.227;QD=12.40;ReadPosRankSum=-3.430;VQSLOD=2.6453;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:65.73:0,66,508	1/1:2,4:6:9.02:91,9,0	0/1:20,0:11:5.71:6,0,29	0/1:17,0:10:1.82:2,0,44	0/0:37,0:38:96.67:0,97,731	0/0:19,0:20:55.83:0,56,424	0/0:16,0:16:35.85:0,36,278	1/1:12,24:37:65.22:665,65,0	0/0:24,1:26:38.23:0,38,465	0/0:19,1:20:11.38:0,11,270	0/0:12,0:12:26.85:0,27,206	0/0:23,0:24:58.34:0,58,427	0/0:22,1:23:26.29:0,26,387	0/0:13,0:16:41.97:0,42,296	0/0:30,1:32:45.08:0,45,508	0/0:28,0:29:64.74:0,65,493	0/0:18,0:19:28.18:0,28,194	0/0:19,0:19:50.79:0,51,395	1/1:3,14:18:41.90:402,42,0	1/1:7,17:26:27.52:418,28,0	1/1:8,6:14:21.04:212,21,0	0/0:14,0:15:28.88:0,29,215	0/0:21,0:21:35.77:0,36,278	0/0:13,0:16:35.77:0,36,249	0/0:15,0:16:34.89:0,35,261	0/0:24,0:25:61.78:0,62,470	1/1:4,19:24:41.92:410,42,0	0/0:13,0:15:40.89:0,41,308
chr10	106143191	.	G	GTTGT	989.05	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=0.939;DP=558;FS=4.950;HRun=0;HaplotypeScore=141.6698;InbreedingCoeff=0.4906;MQ=62.11;MQ0=16;MQRankSum=-3.481;QD=8.99;ReadPosRankSum=-6.797;VQSLOD=0.3189;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:36:53.57:0,54,577	1/1:5,4:11:15.61:156,16,0	0/0:33,0:13:10.57:0,11,114	0/0:34,0:10:16.86:0,17,106	0/0:28,0:29:54.11:0,54,602	0/0:10,0:10:13.87:0,14,118	0/0:11,0:11:29.93:0,30,259	0/1:29,0:23:31.80:294,0,32	0/0:9,0:8:0.98:0,1,44	0/0:18,0:18:32.53:0,33,335	0/0:18,0:18:37.49:0,37,501	0/0:18,0:18:2.94:0,3,269	0/0:14,0:14:25.07:0,25,242	0/0:19,0:19:27.58:0,28,315	0/0:20,0:19:28.68:0,29,300	0/0:20,0:19:18.94:0,19,215	0/0:32,0:31:46.20:0,46,525	0/0:21,0:20:40.97:0,41,382	1/1:28,0:23:17.11:331,17,0	0/1:12,0:12:24.95:78,0,25	1/1:10,0:10:23.66:162,24,0	0/0:4,0:5:15.02:0,15,148	0/0:11,0:12:5.83:0,6,209	0/0:22,0:20:26.45:0,26,241	0/0:21,0:21:46.05:0,46,486	0/0:24,0:25:47.32:0,47,559	0/1:19,0:19:75.18:123,0,75	0/0:18,0:17:28.31:0,28,375
chr10	106143193	.	T	TG	1007.56	PASS	AB=0.911;AC=8;AF=0.143;AN=56;BaseQRankSum=-4.917;DP=586;FS=3.237;HRun=0;HaplotypeScore=101.4836;InbreedingCoeff=0.4190;MQ=59.73;MQ0=24;MQRankSum=2.585;QD=8.84;ReadPosRankSum=0.308;VQSLOD=3.7443;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:76.39:0,76,635	0/1:12,0:11:33.39:33,0,40	0/0:33,0:12:10.93:0,11,112	0/0:34,0:9:16.88:0,17,107	0/0:28,0:28:60.61:0,61,557	0/0:9,0:9:22.66:0,23,165	0/0:14,0:13:30.40:0,30,256	1/1:12,17:23:16.23:315,16,0	0/0:8,0:7:20.57:0,21,139	0/0:18,0:18:50.65:0,51,415	0/0:19,0:19:47.89:0,48,473	0/0:18,0:18:39.62:0,40,328	0/0:13,0:13:28.08:0,28,235	0/0:20,0:19:41.68:0,42,363	0/0:23,0:22:49.22:0,49,368	0/0:20,0:18:44.71:0,45,359	0/0:32,0:31:60.59:0,61,519	0/0:25,0:23:46.49:0,46,381	0/1:14,16:25:8.46:356,0,8	0/1:12,0:12:37.13:94,0,37	1/1:10,0:10:14.96:182,15,0	0/0:8,0:8:15.01:0,15,137	0/0:14,0:14:29.99:0,30,259	0/0:24,0:22:34.29:0,34,273	0/0:24,0:21:54.42:0,54,462	0/0:26,0:25:62.56:0,63,566	0/1:20,0:20:41.06:172,0,41	0/0:21,0:20:48.55:0,49,409
chr10	106148258	.	AG	A	134.10	PASS	AB=0.900;AC=3;AF=0.054;AN=56;BaseQRankSum=3.249;DP=530;FS=9.063;HRun=6;HaplotypeScore=62.0717;InbreedingCoeff=0.7182;MQ=70.11;MQ0=1;MQRankSum=-0.367;QD=4.79;ReadPosRankSum=1.008;VQSLOD=-0.3157;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:39.26:0,39,464	1/1:0,10:10:21.05:226,21,0	0/1:16,1:12:3.97:4,0,226	0/0:20,0:16:25.99:0,26,289	0/0:19,0:19:57.17:0,57,731	0/0:15,0:15:33.11:0,33,425	0/0:17,0:17:40.80:0,41,549	0/0:26,0:26:50.97:0,51,607	0/0:14,0:14:38.91:0,39,465	0/0:19,0:19:49.93:0,50,601	0/0:15,0:15:36.99:0,37,455	0/0:23,0:23:66.17:0,66,804	0/0:14,0:14:35.60:0,36,448	0/0:18,0:18:48.70:0,49,584	0/0:25,0:25:69.20:0,69,871	0/0:25,0:25:68.11:0,68,842	0/0:23,0:23:60.05:0,60,747	0/0:24,0:24:69.17:0,69,864	0/0:23,0:23:54.73:0,55,641	0/0:14,0:14:33.10:0,33,416	0/0:19,0:19:50.99:0,51,646	0/0:20,0:20:51.16:0,51,661	0/0:12,0:12:30.06:0,30,354	0/0:26,0:25:74.27:0,74,929	0/0:13,0:13:34.33:0,34,420	0/0:22,0:23:63.20:0,63,810	0/0:23,0:23:55.78:0,56,630	0/0:15,0:15:45.15:0,45,587
chr10	106150740	.	T	TCC	7560.14	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-13.073;DP=642;FS=0.357;HRun=0;HaplotypeScore=75.3249;InbreedingCoeff=0.9974;MQ=91.54;MQ0=0;MQRankSum=-0.985;QD=54.00;ReadPosRankSum=-0.293;VQSLOD=5.1557;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.25:0,81,1295	1/1:0,6:6:18.06:366,18,0	0/0:23,0:23:54.21:0,54,963	0/0:30,0:30:87.19:0,87,1276	0/0:19,0:19:51.17:0,51,822	0/0:17,0:17:51.16:0,51,802	0/0:21,0:21:63.22:0,63,1023	1/1:1,30:34:96.29:1875,96,0	0/0:30,0:30:87.30:0,87,1415	0/0:22,0:22:66.21:0,66,1052	0/0:12,0:12:30.10:0,30,484	0/0:21,0:21:60.20:0,60,976	0/0:34,0:34:99:0,102,1625	0/0:24,0:24:66.23:0,66,1077	0/0:28,0:28:84.29:0,84,1370	0/0:20,0:20:60.17:0,60,930	0/0:35,0:35:99:0,105,1669	0/0:24,0:24:66.23:0,66,1064	1/1:1,18:19:57.20:1124,57,0	1/1:1,17:18:48.12:910,48,0	1/1:1,32:35:90.31:1827,90,0	0/0:23,0:23:69.24:0,69,1123	0/0:14,0:14:41.99:0,42,622	0/0:37,0:36:99:0,108,1701	0/0:14,0:14:39.12:0,39,612	0/0:20,0:20:60.20:0,60,977	1/1:0,27:28:72.25:1459,72,0	0/0:7,0:7:21.07:0,21,341
chr10	106153022	.	T	TGGCACTTGGGTTCGA	17427.18	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-0.624;DP=641;FS=6.392;HRun=0;HaplotypeScore=262.2006;InbreedingCoeff=0.9996;MQ=85.94;MQ0=0;MQRankSum=-14.643;QD=141.68;ReadPosRankSum=-2.258;VQSLOD=3.6175;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,129,5223	1/1:8,3:11:30.10:1832,30,0	0/0:23,0:23:54.10:0,54,1755	0/0:26,0:26:71.73:0,72,2661	0/0:17,0:17:42.14:0,42,1818	0/0:15,0:15:30.10:0,30,1210	0/0:28,0:28:81.26:0,81,2882	1/1:26,1:29:78.23:4019,78,0	0/0:23,0:23:63.20:0,63,2600	0/0:22,0:22:57.20:0,57,2429	0/0:11,0:11:30.10:0,30,1311	0/0:38,0:38:99:0,108,4488	0/0:24,0:24:69.22:0,69,2751	0/0:21,0:21:60.21:0,60,2507	0/0:22,0:22:63.22:0,63,2679	0/0:19,0:19:54.17:0,54,2207	0/0:29,0:29:84.26:0,84,3445	0/0:18,0:18:51.17:0,51,2046	1/1:15,3:21:63.22:3081,63,0	1/1:7,12:20:54.19:3024,54,0	1/1:13,5:21:45.63:2431,46,0	0/0:20,0:20:54.19:0,54,2296	0/0:18,0:18:51.17:0,51,2035	0/0:41,0:41:99:0,111,4513	0/0:15,0:15:36.11:0,36,1466	0/0:22,0:22:63.20:0,63,2352	1/1:9,8:21:48.14:3041,48,0	0/0:19,0:19:57.20:0,57,2493
chr10	106158053	.	ATG	A	2667.18	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=2.910;DP=223;FS=2.446;HRun=0;HaplotypeScore=268.6629;InbreedingCoeff=0.5821;MQ=42.45;MQ0=0;MQRankSum=-3.295;QD=12.29;ReadPosRankSum=2.954;VQSLOD=3.4340;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:10:24.74:112,25,0	1/1:0,4:4:11.35:71,11,0	1/1:1,0:1:0.89:2,1,0	0/0:6,0:6:7.73:0,8,85	1/1:0,6:6:15.26:59,15,0	1/1:1,16:17:47.41:249,47,0	1/1:0,8:8:19.58:85,20,0	./.	1/1:1,10:11:30.59:169,31,0	1/1:1,4:5:14.82:120,15,0	1/1:2,10:12:26.21:108,26,0	1/1:0,13:13:36.39:172,36,0	1/1:0,14:14:37.95:167,38,0	1/1:0,12:12:31.85:134,32,0	1/1:0,14:14:38.45:176,38,0	1/1:0,10:10:27.96:132,28,0	1/1:0,4:4:10.52:45,11,0	1/1:0,3:4:9.97:52,10,0	1/1:1,4:5:14.88:106,15,0	1/1:1,7:8:21.74:105,22,0	1/1:0,3:3:2.68:11,3,0	1/1:0,8:8:20.92:84,21,0	1/1:0,3:3:8.33:38,8,0	1/1:2,11:14:25.28:127,25,0	1/1:0,7:7:19.15:84,19,0	1/1:1,8:9:23.68:156,24,0	1/1:0,10:10:25.28:146,25,0	1/1:0,3:3:8.78:53,9,0
chr10	106158055	.	G	GCA	2098.30	PASS	AB=0.889;AC=52;AF=0.963;AN=54;BaseQRankSum=2.910;DP=231;FS=1.863;HRun=0;HaplotypeScore=263.5885;InbreedingCoeff=0.0005;MQ=43.09;MQ0=0;MQRankSum=-2.317;QD=9.12;ReadPosRankSum=2.865;VQSLOD=2.9961;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:10:23.28:84,23,0	1/1:4,0:4:10.57:86,11,0	0/1:2,0:2:20.06:21,0,20	0/1:5,2:7:32.61:33,0,69	1/1:6,0:6:13.53:44,14,0	1/1:17,0:17:43.34:196,43,0	1/1:8,0:8:17.75:63,18,0	./.	1/1:12,0:12:28.16:138,28,0	1/1:6,0:6:14.19:98,14,0	1/1:12,0:12:20.68:75,21,0	1/1:13,0:13:33.38:128,33,0	1/1:15,0:15:34.28:125,34,0	1/1:12,0:12:28.80:102,29,0	1/1:14,1:14:34.96:135,35,0	1/1:11,0:11:25.80:100,26,0	1/1:4,0:4:9.50:33,10,0	1/1:4,0:5:9.04:37,9,0	1/1:5,0:5:14.55:84,15,0	1/1:8,0:8:19.49:83,19,0	1/1:3,0:3:2.37:8,2,0	1/1:8,0:8:18.29:61,18,0	1/1:3,0:3:7.59:28,8,0	1/1:13,1:14:22:104,22,0	1/1:7,0:7:17.27:62,17,0	1/1:9,0:9:22.61:112,23,0	1/1:10,0:10:23.55:119,24,0	1/1:3,0:3:8.39:40,8,0
chr10	106173368	.	ATT	A	2188.83	PASS	AB=0.894;AC=14;AF=0.250;AN=56;BaseQRankSum=8.064;DP=559;FS=6.248;HRun=13;HaplotypeScore=69.9037;InbreedingCoeff=0.8079;MQ=66.31;MQ0=0;MQRankSum=-0.349;QD=14.59;ReadPosRankSum=0.239;VQSLOD=2.4451;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:25:62.13:0,62,798	1/1:5,10:15:23.96:233,24,0	0/1:7,0:5:7.55:8,0,78	0/0:8,0:6:3.34:0,3,58	0/0:22,0:23:59.66:0,60,798	0/0:25,1:31:62.10:0,62,1082	0/1:15,2:18:7.17:7,0,516	1/1:9,18:28:56.75:536,57,0	0/0:18,0:18:45.11:0,45,576	0/0:23,0:24:65.67:0,66,841	0/0:10,0:13:29.57:0,30,353	0/0:18,0:18:48.10:0,48,652	0/0:18,0:20:35.60:0,36,471	0/0:24,0:27:68.68:0,69,896	0/0:19,0:20:53.64:0,54,711	0/0:15,0:17:47.63:0,48,626	0/0:23,0:26:62.18:0,62,843	0/0:14,0:16:44.59:0,45,542	1/1:6,13:20:35.61:374,36,0	1/1:5,13:18:26.89:262,27,0	1/1:3,22:25:60.08:582,60,0	0/0:20,0:21:56.15:0,56,726	0/0:21,1:24:24.53:0,25,589	0/0:15,0:19:45.13:0,45,618	0/0:22,0:22:54.08:0,54,686	0/0:17,0:19:44.62:0,45,584	1/1:4,14:18:39.03:378,39,0	0/0:14,0:18:41.11:0,41,521
chr10	106173709	.	GCACA	G	4828.52	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.896;DP=698;FS=0.865;HRun=0;HaplotypeScore=125.2960;InbreedingCoeff=0.9962;MQ=82.81;MQ0=1;MQRankSum=-10.131;QD=37.43;ReadPosRankSum=-1.107;VQSLOD=4.9235;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,3035	1/1:0,6:6:15.05:285,15,0	0/0:23,0:22:46.15:0,46,1075	0/0:25,0:25:42.43:0,42,720	0/0:21,0:21:57.20:0,57,1474	0/0:18,0:18:54.17:0,54,1348	0/0:33,0:33:93.28:0,93,2340	1/1:1,19:20:57.18:1048,57,0	0/0:33,0:33:96.32:0,96,2527	0/0:20,0:20:60.20:0,60,1559	0/0:13,0:13:39.13:0,39,1031	0/0:36,0:36:99:0,102,2709	0/0:30,0:30:84.27:0,84,2125	0/0:28,0:28:84.27:0,84,2142	0/0:24,0:24:66.23:0,66,1760	0/0:22,0:22:63.22:0,63,1650	0/0:32,0:32:93.32:0,93,2502	0/0:41,0:41:99:0,123,3241	1/1:4,17:21:54.13:937,54,0	1/1:1,14:15:24.04:415,24,0	1/1:3,42:45:72.68:1328,73,0	0/0:20,0:20:57.18:0,57,1443	0/0:16,0:16:48.16:0,48,1284	0/0:37,0:37:99:0,108,2616	0/0:10,0:10:30.09:0,30,754	0/0:26,0:26:78.27:0,78,2036	1/1:3,19:21:45.11:816,45,0	0/0:17,0:17:51.18:0,51,1359
chr10	106179307	.	G	GA	1391.15	PASS	AB=0.783;AC=10;AF=0.179;AN=56;BaseQRankSum=-5.354;DP=625;FS=7.704;HRun=13;HaplotypeScore=76.3124;InbreedingCoeff=0.0851;MQ=69.69;MQ0=1;MQRankSum=2.244;QD=7.06;ReadPosRankSum=-4.190;VQSLOD=1.3467;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:32:35.65:0,36,372	0/0:8,0:9:16.49:0,16,98	0/1:28,0:16:15.55:16,0,47	0/1:17,0:11:1.26:1,0,15	0/0:24,2:34:43.76:0,44,395	0/1:11,1:14:2.93:3,0,110	0/0:25,0:27:75.43:0,75,503	0/1:9,14:24:7.96:334,0,8	0/0:10,1:11:1.92:0,2,157	0/0:25,0:27:17.41:0,17,198	0/1:18,1:21:9.38:9,0,195	0/0:31,0:31:62.41:0,62,431	0/0:14,0:17:32.81:0,33,203	0/0:16,0:18:34.69:0,35,230	0/0:21,0:23:51.65:0,52,341	0/0:27,0:29:72.25:0,72,484	0/0:23,0:25:60.09:0,60,392	0/0:22,0:21:52.45:0,52,349	0/1:6,16:23:30.97:349,0,31	0/1:7,12:21:17.12:243,0,17	0/1:9,13:23:8.10:205,0,8	0/0:11,0:12:19.87:0,20,129	0/0:19,0:23:40.73:0,41,248	0/0:22,0:23:52.51:0,53,353	0/0:21,1:22:19.03:0,19,279	0/0:20,1:21:13.77:0,14,238	1/1:11,12:25:27.14:370,27,0	0/0:19,1:20:1.68:0,2,141
chr10	106179577	.	TG	T	1207.37	PASS	AB=0.983;AC=19;AF=0.339;AN=56;BaseQRankSum=-1.238;DP=420;FS=5.756;HRun=11;HaplotypeScore=52.0044;InbreedingCoeff=0.2339;MQ=70.94;MQ0=21;MQRankSum=0.813;QD=4.97;ReadPosRankSum=-2.184;VQSLOD=0.5243;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:30.12:30,0,33	0/1:6,0:5:11.68:14,0,12	0/0:35,0:11:3.89:0,4,29	0/0:17,0:10:2.69:0,3,34	0/1:18,0:18:4.15:4,0,178	0/0:11,0:11:22.59:0,23,167	0/1:15,2:16:19.42:19,0,171	1/1:16,21:38:63.25:457,63,0	0/1:5,0:5:1.87:2,0,45	0/0:10,0:10:11.36:0,11,84	0/0:11,0:11:4.34:0,4,66	0/1:11,0:10:13.32:13,0,85	0/1:7,0:6:0.44:0,0,90	0/0:5,0:5:5.74:0,6,50	0/0:15,0:14:4.49:0,4,138	0/0:15,0:15:23.39:0,23,215	0/1:33,0:33:56.88:128,0,57	0/1:21,1:22:31.38:31,0,38	1/1:18,2:18:16.18:170,16,0	1/1:1,6:7:14.82:113,15,0	1/1:5,12:17:23:178,23,0	0/0:2,0:2:3.01:0,3,32	0/0:4,0:4:6.80:0,7,49	0/0:10,1:11:17.66:0,18,171	0/0:11,0:9:19.75:0,20,137	0/0:16,0:15:12.29:0,12,255	1/1:5,15:19:26.95:221,27,0	0/0:14,0:14:30.50:0,30,298
chr10	106186484	.	GGGGGCGGA	G	134.02	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=2.614;DP=240;FS=2.569;HRun=0;HaplotypeScore=64.9437;InbreedingCoeff=0.5359;MQ=83.53;MQ0=0;MQRankSum=-2.882;QD=26.80;ReadPosRankSum=1.634;VQSLOD=3.1048;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:35.94:0,36,1091	1/1:0,5:5:9.03:217,9,0	0/0:9,0:8:18.03:0,18,299	0/0:8,0:8:17.89:0,18,246	0/0:7,0:7:15.05:0,15,644	0/0:4,0:4:12.04:0,12,456	0/0:16,0:16:48.12:0,48,1660	0/0:13,0:13:27.02:0,27,745	0/0:11,0:11:27.02:0,27,700	0/0:8,0:8:21.02:0,21,493	./.	0/0:17,0:17:42.13:0,42,1643	0/0:11,0:11:33.01:0,33,914	0/0:15,0:15:36.11:0,36,1307	0/0:7,0:7:18.04:0,18,427	0/0:6,0:6:18.06:0,18,594	0/0:16,0:16:42.06:0,42,1529	0/0:10,0:10:21.07:0,21,906	0/0:5,0:5:6.02:0,6,253	0/0:4,0:4:6.02:0,6,179	0/0:15,0:15:39.07:0,39,1398	0/0:2,0:2:6.02:0,6,259	0/0:5,0:5:6.02:0,6,258	0/0:9,0:9:20.97:0,21,629	0/0:3,0:3:6.02:0,6,259	0/0:8,0:8:18.04:0,18,567	0/0:8,0:8:18.49:0,18,373	0/0:4,0:4:12.04:0,12,464
chr10	106186808	.	CTGTGTGTGTGTG	C	954.82	PASS	AB=0.836;AC=7;AF=0.135;AN=52;BaseQRankSum=5.428;DP=534;FS=5.315;HRun=0;HaplotypeScore=159.6590;InbreedingCoeff=0.5889;MQ=63.35;MQ0=10;MQRankSum=-2.648;QD=10.27;ReadPosRankSum=-1.316;VQSLOD=2.0999;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:54.19:0,54,2850	0/0:4,0:6:1.69:0,2,23	./.	0/0:46,0:21:9.03:0,9,349	0/0:5,0:6:12.04:0,12,647	0/0:12,0:12:33.11:0,33,1748	0/0:35,0:38:72.25:0,72,3819	1/1:13,6:19:18.01:311,18,0	0/0:19,0:22:39.13:0,39,2019	0/0:8,0:8:15.05:0,15,589	0/0:2,0:2:3.01:0,3,177	0/0:29,0:29:40.53:0,41,1817	0/0:8,0:9:9.01:0,9,292	0/0:21,0:23:51.12:0,51,2204	0/0:26,0:27:54.19:0,54,2917	0/0:19,0:22:35.70:0,36,1629	0/0:21,0:24:63.20:0,63,2832	0/0:19,0:22:49.41:0,49,2441	1/1:11,1:12:9.03:282,9,0	./.	0/1:41,10:49:88.60:99,0,89	0/0:4,0:4:3.01:0,3,177	0/0:8,0:8:6.02:0,6,297	0/0:30,0:33:72.25:0,72,3830	0/0:6,0:6:9.03:0,9,411	0/0:13,0:13:21.07:0,21,981	1/1:4,4:10:12.04:398,12,0	0/0:6,0:5:12.04:0,12,595
chr10	106192075	.	T	TGAAGGAAGGAAG	3978.47	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=3.101;DP=614;FS=2.345;HRun=0;HaplotypeScore=210.5691;InbreedingCoeff=0.8497;MQ=69.77;MQ0=0;MQRankSum=-5.782;QD=31.33;ReadPosRankSum=-6.092;VQSLOD=1.4051;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:60.12:0,60,1357	1/1:3,0:3:6.02:111,6,0	0/0:14,0:11:2.97:0,3,20	0/0:19,0:19:5.68:0,6,55	0/0:13,0:13:24.05:0,24,555	0/0:17,0:17:30.03:0,30,672	0/0:22,0:22:5.18:0,5,754	1/1:37,0:36:59.15:1056,59,0	0/0:17,0:17:33.01:0,33,720	0/0:13,0:13:9.03:0,9,250	0/0:19,0:19:36.10:0,36,816	0/0:23,0:23:42.09:0,42,1007	0/0:18,0:18:39.07:0,39,748	0/0:32,0:32:60.13:0,60,1465	0/0:32,0:32:66.14:0,66,1709	0/0:31,0:31:57.01:0,57,1133	0/0:33,0:33:72.18:0,72,1767	0/0:29,0:29:60.07:0,60,1483	1/1:8,9:19:39.09:1135,39,0	1/1:19,0:19:42.03:905,42,0	1/1:28,0:28:45.86:607,46,0	0/0:12,0:12:26.12:0,26,536	0/0:13,0:13:27.08:0,27,579	0/0:37,0:37:93.19:0,93,2437	0/0:20,0:20:33.10:0,33,821	0/0:19,0:19:18.03:0,18,291	1/1:6,11:20:3.01:163,3,0	0/0:14,0:14:30.09:0,30,745
chr10	106197309	.	A	AT	2529.49	PASS	AB=0.571;AC=9;AF=0.161;AN=56;BaseQRankSum=-11.226;DP=631;FS=0.000;HRun=10;HaplotypeScore=62.5159;InbreedingCoeff=0.8865;MQ=67.69;MQ0=1;MQRankSum=1.917;QD=20.73;ReadPosRankSum=-2.241;VQSLOD=3.7172;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:29:45.81:0,46,498	0/0:6,0:6:17.98:0,18,148	0/0:20,0:16:25.43:0,25,176	0/0:18,0:13:9.22:0,9,121	0/0:29,0:29:65.90:0,66,541	0/0:20,0:20:22.16:0,22,386	0/0:22,0:22:59.89:0,60,489	1/1:5,30:36:83.74:896,84,0	0/0:24,0:24:68.90:0,69,564	0/0:24,1:25:30.91:0,31,460	0/0:19,0:19:41.92:0,42,344	0/0:32,0:32:83.83:0,84,681	0/0:16,0:16:41.95:0,42,345	0/0:24,0:24:34.44:0,34,396	0/0:23,0:23:56.91:0,57,468	0/0:23,0:23:59.92:0,60,493	0/0:23,0:23:62.90:0,63,517	0/0:27,1:28:33.87:0,34,480	0/1:2,6:8:3.59:170,0,4	1/1:1,19:20:51.10:532,51,0	1/1:6,14:20:12.26:326,12,0	0/0:12,0:12:29.95:0,30,243	0/0:20,0:21:55.97:0,56,449	0/0:21,0:21:56.51:0,57,444	0/0:20,0:20:50.93:0,51,419	0/0:31,0:31:74.81:0,75,605	1/1:4,34:38:72.18:768,72,0	0/0:22,0:21:41.91:0,42,345
chr10	106197979	.	TGA	T	213.66	PASS	AB=0.946;AC=12;AF=0.250;AN=48;BaseQRankSum=1.836;DP=533;FS=5.446;HRun=0;HaplotypeScore=68.1637;InbreedingCoeff=-0.0400;MQ=58.55;MQ0=13;MQRankSum=-1.493;QD=1.03;ReadPosRankSum=0.241;VQSLOD=0.9136;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,6:29:3:32,3,0	0/0:12,0:12:14.99:0,15,137	./.	./.	0/0:12,0:12:0.47:0,0,1	0/1:14,0:14:22.77:23,0,76	0/1:21,0:21:15.10:37,0,15	0/0:26,0:25:2.94:0,3,18	0/1:16,0:16:25.96:26,0,27	0/0:23,0:23:12.02:0,12,128	0/0:12,0:12:3.01:0,3,40	0/1:22,0:22:15.78:16,0,120	0/0:17,0:17:15:0,15,177	0/0:19,0:18:20.84:0,21,195	1/1:18,5:26:14.53:106,15,0	0/0:25,0:25:30.03:0,30,343	0/1:19,1:19:14.01:14,0,200	0/1:16,5:22:30.97:66,0,31	0/1:10,0:9:17.02:17,0,104	0/0:18,0:18:6:0,6,57	0/0:12,0:12:15.01:0,15,143	0/0:20,0:20:6.02:0,6,87	./.	0/1:20,5:25:14.02:14,0,179	./.	0/0:26,0:26:9.03:0,9,132	0/0:9,0:9:2.99:0,3,25	0/0:5,0:5:2.98:0,3,22
chr10	106199430	.	G	GGT	1240.23	PASS	AB=0.779;AC=9;AF=0.167;AN=54;BaseQRankSum=-4.411;DP=663;FS=16.924;HRun=0;HaplotypeScore=91.2374;InbreedingCoeff=0.3531;MQ=67.59;MQ0=12;MQRankSum=0.453;QD=7.66;ReadPosRankSum=-2.889;VQSLOD=1.0266;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:65.56:0,66,688	0/1:10,1:11:25.95:26,0,184	./.	0/1:47,0:22:9.61:10,0,53	0/0:13,0:14:29.92:0,30,328	0/0:21,0:22:17.89:0,18,411	0/0:21,0:22:34.88:0,35,442	1/1:19,9:28:33.75:411,34,0	0/0:18,0:18:36.11:0,36,418	0/0:18,0:20:35.60:0,36,357	0/0:12,0:12:30.09:0,30,349	0/0:29,0:30:50.98:0,51,567	0/0:19,0:19:41.95:0,42,463	0/0:18,0:18:24.07:0,24,280	0/0:27,0:27:59.84:0,60,665	0/0:25,0:30:56.48:0,56,570	0/0:43,0:47:57.98:0,58,1053	0/0:17,0:18:38.91:0,39,420	0/1:13,6:19:16.06:209,0,16	0/1:4,7:11:14.23:173,0,14	0/1:11,20:31:15.04:303,0,15	0/0:20,0:24:47.80:0,48,511	0/0:15,0:15:30.06:0,30,328	0/0:26,0:26:29.13:0,29,739	0/0:21,0:23:47.95:0,48,526	0/0:26,0:29:50.80:0,51,542	1/1:3,12:15:18.51:259,19,0	0/0:15,0:17:20.89:0,21,219
chr10	106201960	.	TTAA	T	919.41	PASS	AC=14;AF=0.389;AN=36;BaseQRankSum=0.428;DP=205;FS=2.178;HRun=0;HaplotypeScore=34.7496;InbreedingCoeff=0.6348;MQ=71.27;MQ0=3;MQRankSum=0.708;QD=14.14;ReadPosRankSum=-0.552;VQSLOD=2.9192;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,4:9:9.03:118,9,0	./.	./.	./.	0/0:5,0:5:6.02:0,6,115	0/0:4,0:9:15.05:0,15,196	./.	./.	0/0:5,0:6:3.01:0,3,39	1/1:5,3:8:9.03:119,9,0	0/0:4,0:4:3.01:0,3,57	0/0:2,0:2:3.01:0,3,50	0/0:5,0:6:5.95:0,6,57	0/0:8,0:8:9.03:0,9,173	./.	0/0:7,0:7:6.02:0,6,115	1/1:5,15:20:33.11:435,33,0	1/1:7,8:15:3.87:220,4,0	./.	1/1:2,0:4:5.95:42,6,0	0/0:7,0:7:0:0,0,0	./.	./.	./.	1/1:1,1:4:8.96:81,9,0	0/0:1,0:4:9.03:0,9,118	1/1:2,0:5:5.95:42,6,0	0/0:7,0:12:21.07:0,21,275
chr10	106202222	.	C	CTG	617.14	PASS	AB=0.933;AC=17;AF=0.386;AN=44;BaseQRankSum=-3.185;DP=383;FS=0.000;HRun=0;HaplotypeScore=57.8400;InbreedingCoeff=0.3769;MQ=65.48;MQ0=16;MQRankSum=0.653;QD=4.57;ReadPosRankSum=0.753;VQSLOD=1.9222;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:8.98:0,9,80	0/0:2,0:3:2.84:0,3,14	./.	./.	0/0:6,0:6:2.99:0,3,24	1/1:15,7:23:8.77:131,9,0	1/1:12,4:16:9:129,9,0	./.	1/1:7,4:10:9.03:132,9,0	1/1:13,0:11:2.13:5,2,0	0/0:6,0:6:2.99:0,3,32	1/1:8,1:10:3.01:44,3,0	0/1:7,0:7:6.09:51,0,6	1/1:13,2:14:3.01:44,3,0	0/0:7,0:7:9.01:0,9,89	0/0:9,0:9:9.02:0,9,96	0/0:24,0:25:20.77:0,21,163	0/0:23,0:22:14.49:0,14,120	0/0:15,0:17:8.52:0,9,42	./.	0/0:24,0:25:5.68:0,6,28	./.	./.	0/1:15,5:19:16.93:161,0,17	1/1:3,2:6:3.01:44,3,0	0/1:14,0:14:18.93:19,0,26	0/0:4,0:7:5.68:0,6,28	0/0:6,0:6:5.94:0,6,40
chr10	106202365	.	G	GGAAAAAA	1402.05	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=-1.062;DP=294;FS=8.571;HRun=0;HaplotypeScore=60.6737;InbreedingCoeff=0.7092;MQ=54.69;MQ0=11;MQRankSum=-3.602;QD=23.76;ReadPosRankSum=-3.311;VQSLOD=1.1272;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:30.10:0,30,687	0/0:5,0:5:9.02:0,9,163	0/0:9,0:1:3.01:0,3,49	./.	0/0:9,0:9:15.05:0,15,343	0/0:17,0:17:33.11:0,33,755	0/0:15,0:15:36.12:0,36,825	1/1:11,4:14:18.01:412,18,0	0/0:7,0:6:12.04:0,12,275	0/0:11,0:11:21.07:0,21,480	0/0:2,0:2:3.01:0,3,69	0/0:8,0:8:15.05:0,15,344	0/0:7,0:7:9.03:0,9,206	0/0:8,0:7:9.02:0,9,163	0/0:7,0:7:9.03:0,9,190	0/0:7,0:7:18.05:0,18,350	0/0:25,0:25:60.21:0,60,1375	0/0:17,0:17:36.12:0,36,776	1/1:10,4:13:27.05:708,27,0	1/1:3,0:3:2.99:23,3,0	1/1:6,2:8:6.02:188,6,0	0/0:7,0:7:15.05:0,15,329	0/0:6,0:6:15.05:0,15,344	0/0:23,0:23:48.16:0,48,1100	0/0:3,0:3:6.02:0,6,138	0/0:13,0:13:9.03:0,9,206	1/1:7,6:12:6.49:220,6,0	0/0:3,0:3:6.02:0,6,138
chr10	106202734	.	TAAACCTGTCGGGC	T	1469.88	PASS	AC=16;AF=0.800;AN=20;BaseQRankSum=0.022;DP=87;FS=0.000;HRun=0;HaplotypeScore=44.9120;InbreedingCoeff=0.5421;MQ=97.71;MQ0=5;MQRankSum=-3.304;QD=63.91;ReadPosRankSum=2.539;VQSLOD=3.1268;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:3:3.01:112,3,0	./.	0/0:35,0:8:10.86:0,11,387	0/0:20,0:6:11:0,11,179	1/1:0,0:1:3.01:124,3,0	1/1:1,1:3:6.02:227,6,0	1/1:0,0:1:3.01:86,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:1,0:5:8.94:100,9,0	./.	1/1:0,3:2:6.02:234,6,0	./.	./.	./.	./.	./.	./.	1/1:0,4:4:12.03:319,12,0	./.	1/1:0,3:3:9.03:367,9,0
chr10	106203811	.	TA	T	820	PASS	AB=0.871;AC=12;AF=0.214;AN=56;BaseQRankSum=3.155;DP=493;FS=9.165;HRun=14;HaplotypeScore=60.9041;InbreedingCoeff=0.6155;MQ=56.33;MQ0=34;MQRankSum=0.219;QD=6.61;ReadPosRankSum=0.119;VQSLOD=1.6793;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,1:33:57.69:0,58,631	0/0:5,0:6:11.80:0,12,89	0/1:5,1:4:11.25:11,0,40	0/0:15,0:9:9.95:0,10,88	0/0:19,0:19:33.50:0,33,304	0/0:21,0:22:34.07:0,34,301	0/0:16,0:17:32.85:0,33,288	1/1:10,20:27:47.48:326,47,0	0/0:13,0:12:22.19:0,22,189	0/0:22,0:21:45.66:0,46,380	0/0:14,1:18:18.21:0,18,283	0/0:9,0:10:29.87:0,30,265	0/0:7,0:6:14.97:0,15,131	0/0:15,0:14:30.03:0,30,279	0/1:20,3:21:16.73:17,0,282	0/0:17,0:15:6.24:0,6,167	0/0:26,2:31:21.36:0,21,431	0/0:25,0:19:38.71:0,39,327	1/1:6,12:16:32.58:222,33,0	1/1:8,9:16:20.58:138,21,0	1/1:2,3:5:5.93:41,6,0	0/0:3,0:3:9.01:0,9,84	0/0:16,1:18:21.25:0,21,316	0/0:15,0:13:27.03:0,27,251	0/0:19,2:21:1.30:0,1,274	0/0:16,0:14:24.01:0,24,216	1/1:7,16:24:4.27:231,4,0	0/0:16,2:17:0.87:0,1,286
chr10	106205964	.	TGTGAGA	T	988.82	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-0.444;DP=583;FS=7.713;HRun=0;HaplotypeScore=114.8449;InbreedingCoeff=0.5207;MQ=49.78;MQ0=32;MQRankSum=0.332;QD=6.03;ReadPosRankSum=-2.120;VQSLOD=1.4026;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:99:255,0,174	0/0:8,0:8:8.77:0,9,73	1/1:10,0:2:4.96:23,5,0	0/0:26,0:5:7.85:0,8,77	0/0:20,0:19:8.17:0,8,507	0/0:28,0:28:44.15:0,44,480	0/0:19,0:19:6.18:0,6,296	1/1:14,0:13:13.11:99,13,0	0/0:21,0:21:45:0,45,732	0/0:16,0:16:28.07:0,28,310	0/0:8,0:8:15.01:0,15,235	0/0:26,0:26:55.13:0,55,641	0/0:24,0:23:10.22:0,10,766	0/0:16,0:17:33.50:0,34,450	0/0:26,0:25:53.15:0,53,769	0/0:27,0:26:32.58:0,33,965	0/0:21,0:20:8.92:0,9,421	0/0:17,0:17:33.60:0,34,481	1/1:13,0:9:9.52:97,10,0	0/0:6,13:19:2.72:0,3,23	1/1:31,0:28:7.48:431,7,0	0/0:22,0:21:24.47:0,24,540	0/0:20,0:19:30.95:0,31,458	0/0:19,0:19:32.98:0,33,414	0/1:20,0:19:99:114,0,230	0/0:34,0:32:58.58:0,59,1135	1/1:0,23:24:5.08:121,5,0	0/1:19,0:16:10.38:10,0,300
chr10	106205966	.	TGAGA	T	738.46	PASS	AB=0.988;AC=15;AF=0.313;AN=48;BaseQRankSum=-0.443;DP=582;FS=25.489;HRun=0;HaplotypeScore=100.3182;InbreedingCoeff=0.3990;MQ=49.54;MQ0=29;MQRankSum=1.180;QD=3.34;ReadPosRankSum=-1.119;VQSLOD=0.3532;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:33:23.86:330,24,0	./.	./.	./.	0/1:22,0:21:8.54:9,0,374	0/0:29,0:29:16.84:0,17,218	0/0:19,0:19:14.56:0,15,233	1/1:15,0:14:1.20:2,1,0	0/0:19,0:19:24.03:0,24,384	0/0:14,0:14:12.43:0,12,150	0/0:7,0:7:12.03:0,12,178	0/0:27,0:27:21.96:0,22,364	0/0:24,0:23:33.10:0,33,517	0/0:18,0:18:15.48:0,15,224	0/1:30,0:29:13.60:14,0,426	0/0:29,0:28:33.79:0,34,588	0/0:21,0:20:18.49:0,18,272	0/1:14,1:15:24.88:25,0,273	1/1:10,3:9:4.53:51,5,0	./.	1/1:30,0:27:23.29:290,23,0	0/0:23,0:22:31.35:0,31,475	0/0:19,0:18:24.07:0,24,366	0/0:18,0:18:21.04:0,21,332	0/1:20,0:19:71.76:84,0,72	0/0:34,0:32:49.75:0,50,783	1/1:24,0:24:5.09:62,5,0	0/1:19,0:16:28.24:28,0,106
chr10	106207135	.	GC	G	2601.45	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.229;DP=568;FS=31.808;HRun=3;HaplotypeScore=58.0855;InbreedingCoeff=0.9888;MQ=90.00;MQ0=0;MQRankSum=-2.614;QD=28.90;ReadPosRankSum=-1.259;VQSLOD=1.2962;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:81.26:0,81,1147	0/0:8,0:8:18.05:0,18,259	0/0:24,0:24:70.99:0,71,940	0/0:21,0:21:60.17:0,60,834	0/0:16,0:16:21.07:0,21,301	0/0:17,0:17:45.14:0,45,629	0/0:38,0:38:99:0,108,1499	1/1:3,14:17:36.11:446,36,0	0/0:23,0:23:69.19:0,69,970	0/0:28,0:28:78.26:0,78,1123	0/0:7,0:7:18.05:0,18,243	0/0:22,0:22:63.21:0,63,907	0/0:18,0:18:54.16:0,54,757	0/0:27,0:27:81.24:0,81,1128	0/0:27,0:27:75.25:0,75,1071	0/0:24,0:24:69.21:0,69,959	0/0:41,0:41:99:0,120,1706	0/0:25,0:25:72.24:0,72,1036	1/1:3,16:19:45.12:544,45,0	1/1:0,5:5:15.05:186,15,0	1/1:1,30:31:81.25:1004,81,0	0/0:11,0:11:24.07:0,24,327	0/0:8,0:8:21.07:0,21,302	0/0:31,0:31:90.30:0,90,1296	0/0:8,0:8:24.08:0,24,345	0/0:14,0:14:42.14:0,42,605	1/1:1,17:18:48.15:595,48,0	0/0:7,0:7:21.07:0,21,302
chr10	106208223	.	C	CTT	2398.56	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=0.090;DP=498;FS=2.150;HRun=12;HaplotypeScore=76.7716;InbreedingCoeff=0.8221;MQ=72.63;MQ0=2;MQRankSum=0.778;QD=18.74;ReadPosRankSum=-3.883;VQSLOD=2.1736;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:47:88.94:0,89,825	0/0:9,0:9:14.91:0,15,138	0/0:19,0:15:2.19:0,2,48	0/1:20,0:15:7.61:8,0,70	0/0:21,0:22:32.81:0,33,293	0/0:17,0:18:29.81:0,30,324	0/0:16,0:16:29.88:0,30,260	1/1:13,20:36:71.54:813,72,0	0/0:17,0:18:16.80:0,17,192	0/0:20,0:20:38.91:0,39,358	0/0:12,0:12:23.93:0,24,222	0/0:20,0:20:41.57:0,42,359	0/0:13,0:13:26.68:0,27,233	0/0:12,0:12:10.24:0,10,255	0/0:17,0:17:44.97:0,45,407	0/0:16,0:16:32.93:0,33,305	0/0:28,0:28:69.01:0,69,636	0/0:17,0:17:31.42:0,31,272	1/1:10,9:22:47.05:534,47,0	1/1:1,17:20:50.84:561,51,0	1/1:6,3:10:16.07:163,16,0	0/0:5,0:5:5.93:0,6,55	0/0:13,0:13:23.86:0,24,208	0/0:7,0:7:21.02:0,21,194	0/0:13,0:14:26.62:0,27,233	0/0:18,0:18:45:0,45,412	1/1:0,13:18:41.10:495,41,0	0/0:9,0:9:17.95:0,18,158
chr10	106210044	.	AGT	A	2780.06	PASS	AB=0.955;AC=8;AF=0.143;AN=56;BaseQRankSum=3.643;DP=933;FS=2.320;HRun=0;HaplotypeScore=115.3997;InbreedingCoeff=0.4059;MQ=50.06;MQ0=53;MQRankSum=-4.551;QD=10.07;ReadPosRankSum=-1.205;VQSLOD=2.9975;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:46:80.27:0,80,1181	0/1:17,0:15:20.12:110,0,20	0/0:26,0:3:5.50:0,5,43	0/0:41,0:8:8:0,8,61	0/0:18,0:18:29.89:0,30,429	0/0:18,0:15:36.06:0,36,479	0/0:43,0:40:74.17:0,74,985	0/1:66,0:42:4.81:770,0,5	0/0:32,0:31:51.11:0,51,695	0/0:37,0:30:54.90:0,55,699	0/0:18,0:17:24.38:0,24,287	0/0:35,0:33:59.87:0,60,774	0/0:23,0:22:39.12:0,39,581	0/0:21,0:18:38.71:0,39,430	0/0:35,0:33:47.57:0,48,959	0/0:32,0:31:60:0,60,822	0/0:24,0:22:38.02:0,38,475	0/0:14,0:15:29.92:0,30,305	1/1:21,3:15:4.96:260,5,0	0/1:25,1:26:62.52:334,0,63	1/1:106,18:105:74.17:1178,74,0	0/0:29,0:28:50.99:0,51,591	0/0:31,0:32:50.52:0,51,841	0/0:38,0:37:74.82:0,75,1100	0/0:27,0:25:25.10:0,25,422	0/0:35,0:24:56.88:0,57,785	0/1:15,3:17:10.49:268,0,10	0/0:29,0:28:63.20:0,63,967
chr10	106210098	.	T	TGA	3924.97	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=1.835;DP=818;FS=3.889;HRun=0;HaplotypeScore=102.3789;InbreedingCoeff=0.0026;MQ=52.10;MQ0=35;MQRankSum=-1.912;QD=7.03;ReadPosRankSum=5.051;VQSLOD=2.5759;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:31.95:0,32,463	0/0:16,0:15:38.78:0,39,457	0/0:23,0:5:12.87:0,13,132	0/0:25,0:9:15.93:0,16,139	0/0:19,0:19:4.81:0,5,255	0/1:25,0:22:17.51:18,0,319	0/1:35,0:35:99:134,0,268	1/1:38,5:38:95.84:1257,96,0	0/1:36,0:35:14.73:15,0,253	0/0:34,0:28:81.41:0,81,923	0/0:14,0:14:27.08:0,27,389	0/1:26,0:26:43.49:43,0,145	0/1:27,0:25:31.05:31,0,138	0/1:22,0:19:16.67:17,0,165	0/1:38,0:37:47.17:47,0,313	0/0:31,0:31:79.22:0,79,946	0/1:27,0:24:9.69:10,0,242	0/1:13,0:12:8.89:9,0,53	1/1:12,13:17:1.30:387,1,0	1/1:13,5:18:22.48:375,22,0	1/1:34,57:79:37.88:751,38,0	0/1:24,0:24:79.81:80,0,111	0/1:23,0:23:17.17:17,0,301	0/1:43,0:41:65.41:65,0,335	0/1:24,0:23:17.70:18,0,159	0/0:33,0:30:80.61:0,81,771	1/1:10,6:16:34.32:650,34,0	0/0:15,0:15:38.99:0,39,440
chr10	106217292	.	CA	C	4060.09	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.258;DP=571;FS=7.720;HRun=4;HaplotypeScore=57.8505;InbreedingCoeff=0.9963;MQ=83.83;MQ0=0;MQRankSum=-3.957;QD=33.28;ReadPosRankSum=-1.636;VQSLOD=3.4459;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.26:0,78,1091	1/1:0,5:5:15.05:180,15,0	0/0:18,0:18:45.46:0,45,556	0/0:19,0:19:39.09:0,39,505	0/0:32,0:32:87.03:0,87,1185	0/0:21,0:21:60.20:0,60,839	0/0:19,0:19:54.18:0,54,754	1/1:4,34:38:99:1202,102,0	0/0:17,0:17:48.16:0,48,671	0/0:25,0:25:69.22:0,69,938	0/0:19,0:19:57.17:0,57,766	0/0:15,0:15:45.15:0,45,630	0/0:9,0:9:27.09:0,27,378	0/0:16,0:16:45.15:0,45,630	0/0:24,0:24:72.24:0,72,1008	0/0:29,0:29:87.29:0,87,1218	0/0:34,0:34:93.31:0,93,1298	0/0:11,0:11:27.09:0,27,372	1/1:0,18:18:51.14:592,51,0	1/1:0,17:17:51.16:612,51,0	1/1:0,17:17:51.16:612,51,0	0/0:13,0:13:39.12:0,39,530	0/0:14,0:14:42.13:0,42,570	0/0:27,0:27:66.22:0,66,922	0/0:29,0:29:81.26:0,81,1118	0/0:19,0:19:57.19:0,57,798	1/1:1,26:27:72.22:863,72,0	0/0:12,0:12:33.11:0,33,462
chr10	106219151	.	CCT	C	868.22	PASS	AB=0.844;AC=15;AF=0.268;AN=56;BaseQRankSum=6.223;DP=628;FS=12.020;HRun=0;HaplotypeScore=102.3340;InbreedingCoeff=-0.3595;MQ=68.27;MQ0=14;MQRankSum=0.724;QD=2.64;ReadPosRankSum=0.661;VQSLOD=1.1293;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,5:31:99:145,0,443	0/0:9,0:9:5.64:0,6,43	0/0:27,0:17:0.47:0,0,1	0/0:31,0:18:3.01:0,3,39	0/0:22,0:20:11.83:0,12,414	0/1:17,3:21:74.62:75,0,391	0/1:26,2:29:5.23:5,0,787	0/0:33,0:33:28.35:0,28,292	0/1:11,3:15:81.42:81,0,158	0/1:21,3:24:99:130,0,461	0/1:16,1:20:42.61:43,0,328	0/0:18,0:17:39.12:0,39,574	0/1:9,5:14:47.21:47,0,210	0/1:7,2:9:22.15:22,0,125	0/0:15,0:16:19.85:0,20,442	0/0:21,1:22:45.15:0,45,678	0/1:16,4:21:96.73:97,0,546	0/0:15,0:14:30.07:0,30,437	0/0:15,0:22:20.96:0,21,174	0/0:19,0:34:20.49:0,20,180	0/0:23,0:22:8.95:0,9,106	0/1:21,1:23:18.22:18,0,325	0/1:19,1:19:13.13:13,0,232	0/1:23,2:27:53.32:53,0,662	0/1:15,1:17:9.21:9,0,456	0/1:18,4:24:99:108,0,544	0/0:14,0:25:30.15:0,30,228	0/1:25,5:29:99:173,0,427
chr10	106219673	.	T	TTC	1183.69	PASS	AB=0.760;AC=18;AF=0.321;AN=56;BaseQRankSum=0.924;DP=722;FS=37.782;HRun=0;HaplotypeScore=119.7946;InbreedingCoeff=0.5378;MQ=66.11;MQ0=9;MQRankSum=-3.417;QD=4.03;ReadPosRankSum=-2.641;VQSLOD=0.8513;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:29:32.74:0,33,318	1/1:9,0:9:5.93:39,6,0	1/1:27,0:20:0.94:2,1,0	0/0:30,0:18:7.80:0,8,72	0/0:19,0:20:17.84:0,18,161	0/0:17,0:17:15:0,15,148	0/0:26,0:26:25.79:0,26,278	1/1:26,0:24:13.40:85,13,0	0/0:32,0:32:47.90:0,48,497	0/0:24,0:24:18.04:0,18,193	0/0:13,0:14:14.87:0,15,147	0/1:15,13:28:33.44:374,0,33	0/0:27,0:28:26.82:0,27,268	0/0:21,0:20:21.05:0,21,233	0/0:30,0:35:47.96:0,48,513	0/1:29,1:34:3.68:4,0,324	0/0:36,0:38:56.61:0,57,593	0/0:25,0:27:23.16:0,23,304	1/1:18,0:18:10.25:92,10,0	1/1:36,0:35:3.01:38,3,0	1/1:28,0:31:3.01:31,3,0	0/0:21,0:22:29.91:0,30,313	0/1:10,6:17:26.47:79,0,26	0/1:20,18:42:60.69:414,0,61	0/0:15,0:17:29.60:0,30,267	0/0:28,0:28:24.02:0,24,266	1/1:22,0:25:25.15:199,25,0	0/0:17,0:17:17.86:0,18,170
chr10	106220114	.	ACAC	A	1024.58	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.267;DP=772;FS=28.591;HRun=0;HaplotypeScore=144.8052;InbreedingCoeff=0.9188;MQ=89.57;MQ0=0;MQRankSum=-8.702;QD=21.35;ReadPosRankSum=3.563;VQSLOD=1.7439;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,153,3661	1/1:0,5:5:15.04:169,15,0	0/0:36,0:36:99:0,101,2305	0/0:32,0:33:93.32:0,93,2172	0/0:32,0:32:96.31:0,96,2290	0/0:22,0:22:66.23:0,66,1601	0/0:35,0:35:99:0,105,2585	1/1:2,0:2:2.54:26,3,0	0/0:32,0:32:96.32:0,96,2316	0/0:35,0:35:99:0,102,2468	0/0:29,0:29:84.29:0,84,2012	0/0:29,0:29:87.28:0,87,2076	0/0:34,0:34:99:0,102,2425	0/0:34,0:34:99:0,102,2400	0/0:56,0:56:99:0,169,4079	0/0:34,0:34:99:0,102,2439	0/0:33,0:33:99:0,99,2427	0/0:24,0:24:72.25:0,72,1761	1/1:2,5:7:21.04:229,21,0	1/1:0,15:15:35.61:394,36,0	1/1:3,1:4:3.01:34,3,0	0/0:44,0:44:99:0,126,3050	0/0:26,0:26:68.91:0,69,1696	0/0:37,0:37:99:0,111,2694	0/0:21,0:21:60.21:0,60,1478	0/0:36,0:36:99:0,108,2653	1/1:5,10:15:34.86:346,35,0	0/0:10,0:10:27.08:0,27,608
chr10	106220118	.	GTGAGTAAATGATGCGAAATGATGTGAGT	G	6923.63	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=10.124;DP=747;FS=34.179;HRun=0;HaplotypeScore=537.0544;InbreedingCoeff=0.9496;MQ=93.20;MQ0=0;MQRankSum=-9.632;QD=182.20;ReadPosRankSum=4.267;VQSLOD=3.2631;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,148,16811	1/1:0,5:5:15.05:1042,15,0	0/0:37,0:37:99:0,111,7371	0/0:35,0:35:99:0,105,6828	0/0:30,0:30:90.31:0,90,10525	0/0:23,0:23:69.21:0,69,7945	0/0:33,0:33:99:0,99,9471	./.	0/0:31,0:31:93.30:0,93,9753	0/0:33,0:33:99:0,99,10496	0/0:28,0:28:84.27:0,84,7879	0/0:30,0:30:90.31:0,90,10623	0/0:32,0:32:96.31:0,96,10768	0/0:31,0:31:93.32:0,93,10579	0/0:54,0:54:99:0,163,16848	0/0:34,0:34:99:0,102,12127	0/0:32,0:32:96.31:0,96,11366	0/0:25,0:25:75.26:0,75,9446	1/1:0,5:5:15.05:1051,15,0	1/1:1,12:13:36.12:2490,36,0	1/1:1,1:2:3.01:208,3,0	0/0:39,0:39:99:0,114,11395	0/0:28,0:28:74.67:0,75,9056	0/0:37,0:37:99:0,111,12708	0/0:22,0:22:63.22:0,63,7182	0/0:36,0:36:99:0,108,12502	1/1:3,10:13:36.04:2132,36,0	0/0:9,0:9:24.08:0,24,2912
chr10	106221273	.	T	TA	4086.66	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-7.826;DP=585;FS=3.299;HRun=9;HaplotypeScore=57.5172;InbreedingCoeff=0.9817;MQ=67.27;MQ0=0;MQRankSum=-2.890;QD=26.37;ReadPosRankSum=-2.908;VQSLOD=3.2022;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,975	0/0:5,0:5:8.99:0,9,78	0/0:13,0:12:14.94:0,15,121	0/0:14,0:13:25.46:0,25,193	0/0:27,0:27:71.95:0,72,621	0/0:18,0:18:47.97:0,48,413	0/0:12,0:12:32.99:0,33,286	1/1:8,34:43:99:1102,102,0	0/0:17,0:17:35.98:0,36,312	0/0:25,0:25:65.97:0,66,571	0/0:29,0:29:77.86:0,78,659	0/0:15,0:15:38.97:0,39,334	0/0:14,0:14:35.99:0,36,312	0/0:13,0:13:38.96:0,39,332	0/0:25,0:25:62.96:0,63,544	0/0:21,0:21:50.96:0,51,443	0/0:23,0:23:56.94:0,57,485	0/0:17,0:17:41.96:0,42,358	1/1:5,25:30:75.16:802,75,0	1/1:3,27:30:75.20:830,75,0	1/1:3,16:19:45.12:498,45,0	0/0:14,0:14:35.96:0,36,305	0/0:20,0:20:53.94:0,54,460	0/0:16,0:16:44.97:0,45,387	0/0:12,0:12:32.99:0,33,286	0/0:31,0:31:83.96:0,84,729	1/1:4,29:33:78.20:855,78,0	0/0:8,0:8:24:0,24,208
chr10	106221831	.	G	GT	576.14	PASS	AB=1.000;AC=10;AF=0.192;AN=52;BaseQRankSum=2.221;DP=144;FS=5.405;HRun=8;HaplotypeScore=23.0048;InbreedingCoeff=0.5596;MQ=79.97;MQ0=0;MQRankSum=-1.809;QD=13.40;ReadPosRankSum=-1.802;VQSLOD=1.3687;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:18.01:0,18,165	./.	0/1:7,0:6:0.59:1,0,44	0/1:5,0:3:6.11:6,0,29	0/0:4,0:4:3:0,3,27	0/0:3,0:3:9:0,9,82	0/0:3,0:3:6:0,6,55	1/1:2,9:11:27.07:302,27,0	0/0:5,0:5:9:0,9,82	0/0:4,0:4:12:0,12,108	0/0:4,0:4:9:0,9,82	0/0:4,0:4:9:0,9,82	0/0:4,0:4:5.99:0,6,51	0/0:6,0:6:17.99:0,18,159	0/0:4,0:4:9:0,9,79	0/0:4,0:4:9:0,9,79	0/0:15,0:15:29.96:0,30,266	0/0:11,0:11:27.01:0,27,247	1/1:3,5:7:15.04:173,15,0	1/1:2,3:5:9.03:104,9,0	./.	0/0:3,0:3:9:0,9,82	0/0:3,0:3:5.99:0,6,51	0/0:2,0:2:2.99:0,3,23	0/0:3,0:3:6:0,6,55	0/0:7,0:7:17.99:0,18,157	1/1:3,4:7:12.03:138,12,0	0/0:4,0:4:12.01:0,12,110
chr10	106221845	.	TTA	T	95.91	PASS	AB=0.785;AC=4;AF=0.67;AN=6;BaseQRankSum=0.000;DP=96;FS=4.228;HRun=0;HaplotypeScore=19.4977;MQ=70.42;MQ0=7;MQRankSum=0.898;QD=3.43;ReadPosRankSum=1.271;VQSLOD=0.3508;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	1/1:6,0:6:2.74:12,3,0	./.	./.	./.	./.	./.	./.	./.	./.	0/1:9,1:12:20.25:96,0,20	0/1:7,3:10:13.82:56,0,14	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	106221846	.	TA	T	131.32	PASS	AC=8;AF=0.167;AN=48;BaseQRankSum=3.605;DP=82;FS=2.323;HRun=1;HaplotypeScore=14.5599;InbreedingCoeff=0.4696;MQ=73.85;MQ0=7;MQRankSum=-4.096;QD=14.59;ReadPosRankSum=-1.267;VQSLOD=2.4966;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:15.05:0,15,184	./.	0/0:5,0:2:5.96:0,6,48	0/0:8,0:3:5.97:0,6,56	0/0:1,0:1:3.01:0,3,37	0/0:3,0:3:9.03:0,9,110	0/0:2,0:2:6.02:0,6,74	1/1:0,1:1:3.01:37,3,0	0/0:3,0:3:9.03:0,9,110	0/0:2,0:2:6.02:0,6,74	0/0:2,0:2:6.02:0,6,74	0/0:1,0:1:3.01:0,3,37	0/0:1,0:1:3.01:0,3,37	0/0:4,0:4:12.04:0,12,147	0/0:2,0:2:6.02:0,6,74	0/0:2,0:2:6.02:0,6,74	0/0:12,0:12:22.12:0,22,195	0/0:10,0:10:24.68:0,25,252	1/1:1,3:3:8.91:61,9,0	1/1:0,2:2:6.02:78,6,0	./.	0/0:1,0:1:3.01:0,3,37	./.	./.	0/0:2,0:2:6.02:0,6,74	0/0:3,0:3:9.03:0,9,110	1/1:0,2:2:6.02:78,6,0	0/0:2,0:2:6.02:0,6,73
chr10	106223705	.	AT	A	2052.58	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.528;DP=565;FS=2.740;HRun=7;HaplotypeScore=55.2771;InbreedingCoeff=0.9811;MQ=75.01;MQ0=2;MQRankSum=1.836;QD=19.18;ReadPosRankSum=-2.302;VQSLOD=2.8715;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,1367	1/1:1,9:10:15.03:153,15,0	0/0:37,0:14:23.83:0,24,179	0/0:26,0:18:8.13:0,8,123	0/0:31,0:31:84.24:0,84,1028	0/0:28,0:28:81.20:0,81,977	0/0:21,0:21:57.14:0,57,666	1/1:5,20:25:60.05:583,60,0	0/0:22,0:22:35.77:0,36,624	0/0:21,0:21:60.17:0,60,725	0/0:18,0:18:51.15:0,51,629	0/0:20,0:20:54.17:0,54,679	0/0:10,0:10:30.08:0,30,364	0/0:13,0:13:39.12:0,39,490	0/0:16,0:16:36.11:0,36,442	0/0:17,0:17:45.10:0,45,526	0/0:21,0:21:60.18:0,60,742	0/0:24,0:24:66.02:0,66,737	1/1:2,16:18:48.07:475,48,0	1/1:0,12:12:30.02:295,30,0	1/1:0,20:20:36.08:367,36,0	0/0:14,0:15:45.01:0,45,543	0/0:9,0:9:21.07:0,21,259	0/0:16,0:16:42.12:0,42,516	0/0:18,0:18:54.16:0,54,657	0/0:24,0:24:69.20:0,69,842	1/1:2,20:22:36.08:367,36,0	0/0:11,0:11:30.04:0,30,335
chr10	106224173	.	C	CCGA	4767.52	PASS	AB=0.774;AC=31;AF=0.620;AN=50;BaseQRankSum=-9.436;DP=259;FS=0.000;HRun=0;HaplotypeScore=45.8736;InbreedingCoeff=-0.2468;MQ=25.76;MQ0=75;MQRankSum=-2.437;QD=20.29;ReadPosRankSum=-1.120;VQSLOD=3.8327;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,9:8:21.07:407,21,0	0/1:3,2:8:31.96:211,0,32	./.	./.	0/1:6,4:10:49.41:222,0,49	0/0:3,0:2:2.96:0,3,19	1/1:6,3:3:9.03:177,9,0	1/1:9,2:4:8.98:150,9,0	0/1:3,9:13:45.86:440,0,46	0/1:9,6:8:25.31:284,0,25	0/1:7,4:6:41.21:128,0,41	0/1:4,6:9:16.76:308,0,17	1/1:3,1:2:6:81,6,0	1/1:1,1:1:3.01:60,3,0	0/1:5,2:5:22.34:127,0,22	1/1:3,5:6:12.04:229,12,0	1/1:3,12:12:26.68:471,27,0	0/0:5,0:1:2.92:0,3,17	1/1:9,2:6:17.89:252,18,0	0/1:7,0:11:91.79:153,0,92	1/1:7,0:3:6.02:117,6,0	0/1:11,4:13:49.11:351,0,49	0/1:5,1:5:47.39:47,0,64	./.	0/0:5,1:4:8.90:0,9,60	0/1:13,7:16:99:332,0,126	0/1:10,0:9:68.46:172,0,68	0/1:4,2:5:11.13:49,0,11
chr10	106224175	.	G	GAA	3928.59	PASS	AB=1.000;AC=44;AF=0.880;AN=50;BaseQRankSum=-3.600;DP=253;FS=16.580;HRun=0;HaplotypeScore=45.1023;InbreedingCoeff=0.2142;MQ=24.34;MQ0=78;MQRankSum=1.582;QD=16.65;ReadPosRankSum=2.777;VQSLOD=1.6240;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,1:8:21.07:318,21,0	1/1:7,2:8:12.40:174,12,0	./.	./.	1/1:10,0:10:11.37:212,11,0	0/0:2,0:1:0:0,0,0	1/1:9,0:3:9.03:138,9,0	1/1:10,2:4:8.98:153,9,0	0/1:13,0:10:12.83:353,0,13	1/1:15,0:8:14.87:140,15,0	1/1:11,0:6:8.84:124,9,0	1/1:9,1:9:17.94:271,18,0	1/1:4,0:2:6.01:76,6,0	1/1:2,0:1:3.01:57,3,0	1/1:6,0:4:6.86:110,7,0	1/1:7,1:6:12.04:199,12,0	1/1:14,0:11:24.08:357,24,0	0/0:5,0:1:0:0,0,0	1/1:6,4:6:18.06:285,18,0	1/1:9,4:11:9.71:146,10,0	1/1:4,3:3:6.02:93,6,0	1/1:14,2:12:18.73:286,19,0	1/1:6,0:5:2.77:49,3,0	./.	0/1:6,0:4:0.07:0,0,0	1/1:19,0:15:11.93:184,12,0	1/1:8,5:9:11.87:160,12,0	1/1:5,0:4:2.94:41,3,0
chr10	106225286	.	A	AAG	298.87	PASS	AB=0.908;AC=9;AF=0.161;AN=56;BaseQRankSum=0.994;DP=311;FS=1.784;HRun=0;HaplotypeScore=90.6756;InbreedingCoeff=0.4306;MQ=48.58;MQ0=2;MQRankSum=0.622;QD=4.46;ReadPosRankSum=1.735;VQSLOD=2.2376;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:20.47:0,20,213	1/1:3,0:3:5.28:39,5,0	0/1:7,0:4:8.39:8,0,33	0/0:7,1:5:8.79:0,9,47	0/0:16,0:15:26.34:0,26,190	0/0:16,0:15:29.67:0,30,221	0/0:10,0:9:17.72:0,18,143	0/1:18,9:27:99:192,0,118	0/0:5,0:5:4.32:0,4,44	0/0:11,0:10:29.88:0,30,261	0/0:8,0:8:19.09:0,19,124	0/0:10,0:10:15.66:0,16,95	0/0:13,0:11:23.50:0,23,172	0/0:14,0:14:29.50:0,30,194	0/0:10,0:10:23.66:0,24,144	0/0:9,0:9:15.92:0,16,96	0/0:20,0:19:35.40:0,35,315	0/0:12,0:11:19.90:0,20,115	0/1:10,0:10:25.20:89,0,25	1/1:4,0:2:3.83:20,4,0	0/0:5,0:4:1.83:0,2,4	0/0:8,0:7:14.84:0,15,102	0/0:9,0:9:20.57:0,21,173	0/0:7,0:7:15.05:0,15,188	0/0:4,0:4:8.35:0,8,64	0/0:16,0:16:24.78:0,25,233	1/1:14,0:13:8.47:86,8,0	0/0:10,0:10:19.44:0,19,156
chr10	106226008	.	TGAGAGAGAGA	T	162.55	PASS	AC=6;AF=0.120;AN=50;BaseQRankSum=1.364;DP=454;FS=4.400;HRun=0;HaplotypeScore=118.9577;InbreedingCoeff=0.6431;MQ=71.23;MQ0=10;MQRankSum=0.971;QD=3.19;ReadPosRankSum=-0.171;VQSLOD=2.2306;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:18.06:0,18,763	./.	./.	0/0:40,0:20:0:0,0,0	0/0:15,0:15:15.05:0,15,527	0/0:10,0:10:6.02:0,6,160	0/0:18,0:19:14.64:0,15,328	0/0:21,0:21:1.55:0,2,4	0/0:13,0:16:21.07:0,21,615	0/0:20,0:19:30.10:0,30,1039	0/0:14,0:14:6.02:0,6,181	0/0:15,0:15:21.07:0,21,883	0/0:8,0:8:12.04:0,12,455	0/0:14,0:14:24.08:0,24,1081	0/0:14,0:13:15.05:0,15,575	0/0:12,0:12:15.05:0,15,651	0/0:21,0:22:21.05:0,21,813	0/0:15,0:15:16.61:0,17,574	1/1:6,3:9:9.01:134,9,0	1/1:20,0:17:6:53,6,0	./.	0/0:13,0:15:21.07:0,21,726	0/0:11,0:11:9.03:0,9,358	0/0:11,0:18:9.03:0,9,421	0/0:10,0:9:15.05:0,15,545	0/0:21,0:20:22.32:0,22,770	1/1:17,5:22:3.01:88,3,0	0/0:5,0:6:6.02:0,6,182
chr10	106227869	.	T	TAA	2508.91	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-4.313;DP=514;FS=2.127;HRun=12;HaplotypeScore=62.3266;InbreedingCoeff=0.8870;MQ=60.19;MQ0=4;MQRankSum=-1.953;QD=20.91;ReadPosRankSum=-4.440;VQSLOD=1.9216;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:71.62:0,72,643	1/1:0,6:7:14.54:177,15,0	0/0:11,0:6:2.68:0,3,12	0/0:9,0:5:0.14:0,0,23	0/0:25,0:25:36.65:0,37,494	0/0:19,0:20:41.62:0,42,373	0/0:14,0:14:32.96:0,33,304	1/1:10,20:30:54.03:631,54,0	0/0:8,0:7:11.94:0,12,111	0/0:27,0:26:29.65:0,30,275	0/0:24,0:26:50.38:0,50,440	0/0:19,0:20:47.70:0,48,423	0/0:10,0:9:20.76:0,21,179	0/0:10,0:10:17.96:0,18,166	0/0:16,0:16:42.02:0,42,389	0/0:14,0:14:35.98:0,36,333	0/0:38,0:38:89.88:0,90,820	0/0:27,0:28:74.78:0,75,678	1/1:5,18:24:53.01:571,53,0	1/1:8,23:33:65.48:757,65,0	1/1:1,3:5:12.04:168,12,0	0/0:5,0:5:11.96:0,12,107	0/0:12,0:12:13.51:0,14,253	0/0:7,0:7:18:0,18,167	0/0:23,0:23:66:0,66,602	0/0:25,0:25:25.16:0,25,490	1/1:4,14:18:29.59:387,30,0	0/0:12,0:12:26.97:0,27,250
chr10	106228540	.	A	AT	4708.47	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-9.015;DP=739;FS=5.051;HRun=5;HaplotypeScore=77.6498;InbreedingCoeff=0.9948;MQ=83.83;MQ0=0;MQRankSum=-3.218;QD=31.81;ReadPosRankSum=-2.975;VQSLOD=4.2088;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,165,1757	1/1:2,7:9:18.06:233,18,0	0/0:17,0:17:39.08:0,39,410	0/0:26,0:26:52.56:0,53,489	0/0:14,0:14:35.22:0,35,384	0/0:24,0:24:60.15:0,60,645	0/0:32,0:32:81.20:0,81,870	1/1:3,21:24:63.20:818,63,0	0/0:26,0:26:72.16:0,72,765	0/0:29,0:29:81.20:0,81,864	0/0:17,0:17:38.22:0,38,417	0/0:31,0:31:93.23:0,93,1000	0/0:30,0:30:90.23:0,90,964	0/0:25,0:25:63.16:0,63,677	0/0:37,0:37:99:0,108,1152	0/0:45,0:45:99:0,129,1386	0/0:31,0:31:84.21:0,84,902	0/0:21,0:21:54.12:0,54,572	1/1:1,20:21:60.20:789,60,0	1/1:3,19:22:47.51:539,48,0	1/1:4,51:55:99:1778,136,0	0/0:26,0:26:64.49:0,64,706	0/0:11,0:11:27.06:0,27,287	0/0:37,0:37:96.22:0,96,1023	0/0:16,0:16:35.21:0,35,378	0/0:29,0:29:72.18:0,72,774	1/1:1,16:17:42.14:551,42,0	0/0:5,0:5:15.04:0,15,161
chr10	106229581	.	C	CT	1833.38	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-1.976;DP=306;FS=7.786;HRun=8;HaplotypeScore=42.7993;InbreedingCoeff=0.8133;MQ=79.13;MQ0=2;MQRankSum=-0.890;QD=18.71;ReadPosRankSum=-3.180;VQSLOD=2.0361;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:24:0,24,220	1/1:1,6:7:15.04:173,15,0	0/1:13,0:12:2.62:3,0,116	0/0:12,0:8:5.58:0,6,54	0/0:10,0:10:20.97:0,21,182	0/0:12,0:12:20.99:0,21,192	0/0:5,0:5:9:0,9,82	1/1:8,30:38:90.25:1024,90,0	0/0:9,0:9:17.97:0,18,160	0/0:10,0:10:27.01:0,27,244	0/0:5,0:5:14.98:0,15,129	0/0:3,0:3:9:0,9,82	0/0:4,0:4:9:0,9,82	0/0:8,0:8:21.01:0,21,192	0/0:6,0:6:15.01:0,15,137	0/0:6,0:6:11.99:0,12,110	0/0:29,0:29:69.03:0,69,632	0/0:25,0:25:59.87:0,60,549	1/1:8,4:12:15.01:159,15,0	1/1:1,4:5:12.03:136,12,0	1/1:4,9:13:24.07:277,24,0	0/0:3,0:3:8.99:0,9,78	0/0:5,0:5:5.99:0,6,55	0/0:7,0:7:11.95:0,12,101	0/0:15,0:15:42.02:0,42,384	0/0:6,0:6:12.01:0,12,110	1/1:2,8:10:21.06:242,21,0	0/0:16,0:16:32.95:0,33,302
chr10	106229657	.	TTG	T	64.62	PASS	AB=0.968;AC=15;AF=0.268;AN=56;BaseQRankSum=2.706;DP=272;FS=38.080;HRun=0;HaplotypeScore=66.9797;InbreedingCoeff=-0.3430;MQ=59.05;MQ0=5;MQRankSum=-2.696;QD=0.44;ReadPosRankSum=2.189;VQSLOD=-0.2312;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:33.85:0,34,231	0/0:7,0:7:1.91:0,2,26	0/0:14,0:6:8.93:0,9,77	0/1:7,0:5:8.09:8,0,29	0/1:14,0:14:0.91:1,0,142	0/0:15,0:15:44.36:0,44,324	0/0:3,0:3:8.75:0,9,53	0/0:14,0:14:19.61:0,20,192	0/1:6,0:6:15.87:16,0,37	0/1:6,0:6:4.34:4,0,62	0/1:7,0:7:12.97:13,0,66	0/1:4,0:5:3.91:4,0,63	0/0:9,0:8:9.81:0,10,84	0/1:8,0:8:3.93:4,0,62	0/1:13,0:13:3.67:4,0,105	0/1:5,3:8:44.44:44,0,71	0/0:15,0:15:23.04:0,23,228	0/1:20,0:20:3.87:4,0,287	0/0:10,0:10:16.05:0,16,112	0/1:9,0:8:8.68:9,0,26	0/0:4,0:4:6.37:0,6,37	0/0:6,1:7:1.15:0,1,47	0/1:8,0:8:11.44:11,0,82	0/0:3,0:3:5.97:0,6,60	0/1:15,0:15:22.29:22,0,110	0/1:10,0:10:14.25:14,0,61	0/1:9,0:9:33.90:41,0,34	0/0:11,0:10:11.24:0,11,167
chr10	106230763	.	TCA	T	3593.04	PASS	AB=0.920;AC=13;AF=0.232;AN=56;BaseQRankSum=9.215;DP=893;FS=1.281;HRun=0;HaplotypeScore=119.5954;InbreedingCoeff=0.8559;MQ=61.15;MQ0=37;MQRankSum=2.479;QD=18.52;ReadPosRankSum=-0.475;VQSLOD=3.6199;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:85.23:0,85,1495	1/1:5,7:12:15.05:181,15,0	0/0:110,0:18:12.01:0,12,152	0/0:102,0:27:15.33:0,15,373	0/0:23,1:24:20.82:0,21,824	0/0:25,1:26:23.97:0,24,824	0/0:28,0:28:57.18:0,57,892	1/1:17,25:43:81.06:937,81,0	0/0:20,0:20:33.11:0,33,527	0/1:21,2:23:30.26:30,0,533	0/0:25,0:25:60.19:0,60,940	0/0:29,1:30:44.11:0,44,1174	0/0:20,0:20:35.59:0,36,510	0/0:21,0:21:45.15:0,45,701	0/0:27,0:27:72.25:0,72,1154	0/0:27,0:27:69.71:0,70,1105	0/0:18,0:18:5.94:0,6,565	0/0:31,0:29:60.20:0,60,950	1/1:7,6:13:18.05:215,18,0	1/1:5,22:27:51.16:615,51,0	1/1:19,41:60:99:1266,105,0	0/0:21,0:21:42.13:0,42,648	0/0:15,0:15:27.09:0,27,425	0/0:42,0:41:99:0,99,1578	0/0:22,0:22:8.93:0,9,634	0/0:25,1:26:33.04:0,33,1021	1/1:7,9:16:30.08:349,30,0	0/0:18,0:18:30.10:0,30,477
chr10	106230808	.	TACAC	T	2614.35	PASS	AB=0.916;AC=14;AF=0.250;AN=56;BaseQRankSum=5.844;DP=724;FS=1.659;HRun=0;HaplotypeScore=136.3444;InbreedingCoeff=0.7122;MQ=58.17;MQ0=16;MQRankSum=-1.658;QD=13.76;ReadPosRankSum=-1.946;VQSLOD=3.3141;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:35:62.92:0,63,1303	1/1:6,8:14:27.06:404,27,0	0/0:43,0:13:6.02:0,6,104	0/0:56,0:22:6.02:0,6,98	0/1:21,1:22:11.91:12,0,697	0/0:25,0:27:50.88:0,51,1028	0/0:27,0:27:54.63:0,55,1077	1/1:25,4:25:21.06:310,21,0	0/0:18,0:18:33.11:0,33,773	0/1:12,1:13:23.69:24,0,480	0/0:17,0:17:33.11:0,33,734	0/0:35,0:36:65.95:0,66,1331	0/0:16,0:18:1.97:0,2,748	0/0:19,0:19:47.89:0,48,966	0/0:31,0:33:53.85:0,54,1035	0/0:19,0:19:18.06:0,18,409	0/0:22,0:22:45.62:0,46,987	0/0:28,0:27:2.84:0,3,896	1/1:11,6:17:11.48:291,11,0	1/1:14,4:18:27.08:392,27,0	1/1:39,13:51:54.46:799,54,0	0/0:17,0:20:41.87:0,42,853	0/0:18,0:19:41.85:0,42,808	0/0:38,0:38:57.64:0,58,1237	0/0:23,0:22:45.12:0,45,1015	0/0:23,0:23:38.66:0,39,739	1/1:9,14:23:35.86:569,36,0	0/0:11,0:12:35.86:0,36,791
chr10	106231526	.	G	GAA	3051.70	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-7.867;DP=581;FS=1.441;HRun=10;HaplotypeScore=67.8400;InbreedingCoeff=0.9667;MQ=69.59;MQ0=0;MQRankSum=1.077;QD=24.61;ReadPosRankSum=-3.541;VQSLOD=2.6786;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:39:93.15:0,93,945	1/1:2,7:9:21.07:313,21,0	0/0:13,0:10:14.70:0,15,122	0/0:11,0:10:5.63:0,6,41	0/0:29,0:29:60.28:0,60,635	0/0:24,0:24:69.14:0,69,695	0/0:16,0:16:48.11:0,48,487	1/1:9,20:32:66.17:881,66,0	0/0:15,0:17:35.54:0,36,398	0/0:21,0:21:53.83:0,54,530	0/0:19,0:19:48.05:0,48,479	0/0:20,0:22:56.56:0,57,602	0/0:17,0:17:50.77:0,51,493	0/0:22,0:22:63.14:0,63,640	0/0:27,0:27:72.14:0,72,725	0/0:18,0:18:51.08:0,51,512	0/0:17,0:17:48.11:0,48,488	0/0:18,0:18:51.09:0,51,512	1/1:9,19:32:68.57:857,69,0	1/1:4,13:17:36.05:482,36,0	1/1:5,5:10:12.04:179,12,0	0/0:16,0:16:45.10:0,45,458	0/0:19,0:20:56.84:0,57,561	0/0:11,0:11:27.05:0,27,274	0/0:25,0:25:72.10:0,72,713	0/0:33,0:33:85.96:0,86,858	1/1:5,18:24:36.12:525,36,0	0/0:22,0:22:66.09:0,66,651
chr10	106231817	.	T	TTC	3202.95	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-5.305;DP=780;FS=4.286;HRun=0;HaplotypeScore=88.7934;InbreedingCoeff=0.9756;MQ=57.90;MQ0=21;MQRankSum=0.868;QD=24.08;ReadPosRankSum=0.492;VQSLOD=4.4107;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,132,1602	1/1:3,7:11:15.05:225,15,0	0/0:60,0:21:29.68:0,30,317	0/0:72,0:14:8.86:0,9,89	0/0:21,0:20:47.78:0,48,551	0/0:20,0:20:48.15:0,48,594	0/0:24,0:24:54.14:0,54,653	1/1:5,15:19:42.05:626,42,0	0/0:28,0:28:78.23:0,78,953	0/0:19,0:20:54:0,54,646	0/0:15,0:15:30.08:0,30,358	0/0:22,0:23:60.16:0,60,718	0/0:31,0:31:75.21:0,75,906	0/0:30,0:31:75.03:0,75,870	0/0:22,0:22:51.15:0,51,619	0/0:25,0:26:60:0,60,697	0/0:40,0:42:99:0,104,1256	0/0:19,0:19:48.12:0,48,579	1/1:12,11:20:16.22:518,16,0	1/1:5,15:20:39.12:590,39,0	1/1:7,37:44:77.07:1235,77,0	0/0:25,0:25:60.15:0,60,726	0/0:17,0:18:47.96:0,48,550	0/0:39,0:40:99:0,99,1202	0/0:16,0:16:39.11:0,39,468	0/0:21,0:21:54.16:0,54,658	1/1:3,11:14:12.04:193,12,0	0/0:22,0:22:36.10:0,36,430
chr10	106239685	.	A	AC	5196.86	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.186;DP=643;FS=0.367;HRun=0;HaplotypeScore=75.3802;InbreedingCoeff=0.9994;MQ=84.36;MQ0=0;MQRankSum=-2.281;QD=37.39;ReadPosRankSum=-1.306;VQSLOD=4.4175;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.32:0,96,1339	1/1:0,10:9:24.08:356,24,0	0/0:21,0:21:52.85:0,53,616	0/0:19,0:19:48.87:0,49,608	0/0:21,0:21:60.16:0,60,802	0/0:12,0:12:33.11:0,33,461	0/0:37,0:37:99:0,108,1509	1/1:0,22:22:60.19:873,60,0	0/0:29,0:29:81.25:0,81,1097	0/0:15,0:15:42.14:0,42,586	0/0:12,0:12:33.11:0,33,460	0/0:34,0:34:99:0,102,1426	0/0:25,0:25:72.22:0,72,974	0/0:24,0:24:69.19:0,69,915	0/0:31,0:31:93.30:0,93,1285	0/0:23,0:23:69.22:0,69,950	0/0:30,0:30:90.27:0,90,1224	0/0:19,0:19:57.19:0,57,797	1/1:0,19:19:54.18:773,54,0	1/1:3,17:20:54.17:774,54,0	1/1:3,46:49:99:1761,120,0	0/0:22,0:22:66.21:0,66,896	0/0:21,0:21:60.19:0,60,823	0/0:31,0:31:93.31:0,93,1300	0/0:16,0:16:36.12:0,36,503	0/0:16,0:16:48.15:0,48,656	1/1:0,19:19:44.89:659,45,0	0/0:13,0:13:39.11:0,39,527
chr10	106239993	.	GCA	G	534.68	PASS	AB=0.897;AC=7;AF=0.130;AN=54;BaseQRankSum=7.671;DP=1647;DS;FS=2.895;HRun=0;HaplotypeScore=147.5568;InbreedingCoeff=0.0772;MQ=36.00;MQ0=572;MQRankSum=-3.255;QD=0.65;ReadPosRankSum=0.641;VQSLOD=2.7449;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:31:62.78:0,63,1133	0/1:78,12:45:99:242,0,729	1/1:40,0:2:2.74:12,3,0	./.	0/0:10,0:6:15.05:0,15,275	0/0:20,0:17:27.09:0,27,495	0/0:33,0:21:39.02:0,39,615	0/0:222,15:33:52.80:0,53,901	0/0:45,0:39:74.89:0,75,1332	0/0:23,0:19:42.14:0,42,770	0/0:13,0:12:27.09:0,27,483	0/0:33,0:28:42.14:0,42,770	0/0:31,0:29:56.51:0,57,1036	0/0:29,0:28:44.89:0,45,802	0/0:34,0:28:51.17:0,51,926	0/0:38,0:33:68.77:0,69,1212	0/0:36,0:27:57.20:0,57,1036	0/0:33,0:28:60.19:0,60,1064	0/1:128,13:32:15.15:15,0,1189	0/1:130,17:64:99:168,0,1524	0/1:224,26:171:99:172,0,2482	0/0:18,0:12:30.10:0,30,548	0/0:16,0:11:30.08:0,30,498	0/0:27,0:22:45.04:0,45,791	0/0:17,0:14:39.13:0,39,698	0/0:25,0:20:54.13:0,54,906	0/1:139,21:91:49.54:50,0,1852	0/0:16,0:15:39.13:0,39,715
chr10	106240079	.	GCA	G	326.35	PASS	AB=0.953;AC=9;AF=0.196;AN=46;BaseQRankSum=4.885;DP=1724;DS;FS=3.735;HRun=0;HaplotypeScore=129.3888;InbreedingCoeff=-0.0657;MQ=28.04;MQ0=720;MQRankSum=-3.213;QD=0.33;ReadPosRankSum=-0.132;VQSLOD=2.3368;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:49,0:23:0.47:1,0,0	0/1:83,6:17:51.40:51,0,73	./.	./.	./.	0/0:26,0:17:3.01:0,3,55	0/0:47,0:20:15.05:0,15,274	0/1:181,7:26:31.96:32,0,743	0/0:63,0:55:32.49:0,32,498	0/0:24,0:16:48.16:0,48,852	./.	0/0:77,0:68:10.46:0,10,170	0/0:46,0:38:15.04:0,15,276	0/0:49,0:40:12.35:0,12,222	0/0:42,0:39:6.02:0,6,110	0/0:55,0:46:25.20:0,25,443	0/0:47,0:41:21.05:0,21,352	0/0:35,1:34:14.89:0,15,275	0/1:160,8:16:99:127,0,532	0/1:114,9:25:64.80:65,0,253	0/1:211,17:76:93.31:93,0,239	0/0:16,0:10:3.01:0,3,55	./.	0/0:38,0:30:9.03:0,9,165	0/1:16,0:13:0:0,0,0	0/0:34,0:17:48.16:0,48,860	0/1:117,6:43:72.64:73,0,100	0/0:21,0:16:12.04:0,12,220
chr10	106240170	.	CGT	C	1339.58	PASS	AB=0.834;AC=6;AF=0.115;AN=52;BaseQRankSum=7.945;DP=1369;FS=3.690;HRun=0;HaplotypeScore=118.0638;InbreedingCoeff=-0.1479;MQ=35.77;MQ0=352;MQRankSum=-6.274;QD=2.46;ReadPosRankSum=-3.413;VQSLOD=0.8970;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:28:27.09:0,27,493	0/1:33,8:12:70.96:71,0,147	./.	./.	0/0:46,0:21:18.01:0,18,330	0/0:23,0:14:15.05:0,15,275	0/0:38,0:25:14.88:0,15,274	0/1:74,42:41:99:851,0,684	0/0:47,0:42:62.95:0,63,1143	0/0:38,0:22:63.18:0,63,1095	0/0:18,0:9:6.02:0,6,110	0/0:64,0:62:98.25:0,98,1803	0/0:39,0:35:74.96:0,75,1367	0/0:49,0:46:63.15:0,63,1134	0/0:54,0:52:99:0,114,2077	0/0:52,0:52:96.33:0,96,1748	0/0:44,0:42:75.26:0,75,1319	0/0:34,0:34:45.15:0,45,825	0/1:51,10:7:99:148,0,144	0/1:68,8:12:84.06:119,0,84	0/1:148,49:70:99:249,0,1240	0/0:33,0:15:5.80:0,6,109	0/0:21,0:8:6.49:0,6,102	0/0:29,0:28:45.15:0,45,822	0/0:32,0:25:15.01:0,15,275	0/0:45,0:26:72.23:0,72,1268	0/1:45,8:10:23.65:24,0,259	0/0:20,0:20:30.10:0,30,522
chr10	106240337	.	G	GCA	4213.66	PASS	AB=0.826;AC=6;AF=0.107;AN=56;BaseQRankSum=9.645;DP=1346;FS=6.928;HRun=0;HaplotypeScore=214.6881;InbreedingCoeff=-0.1200;MQ=49.90;MQ0=51;MQRankSum=-1.208;QD=7.76;ReadPosRankSum=4.704;VQSLOD=3.1904;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,108,1542	0/1:17,7:20:99:327,0,437	0/0:38,0:31:35.28:0,35,961	0/0:40,1:31:53.18:0,53,899	0/0:26,0:26:66.22:0,66,931	0/0:25,0:22:57.19:0,57,816	0/0:35,0:34:93.31:0,93,1328	0/1:92,8:96:99:394,0,2936	0/0:38,0:37:99:0,99,1411	0/0:39,0:35:99:0,99,1415	0/0:18,0:18:48.16:0,48,681	0/0:57,0:52:99:0,129,1839	0/0:30,0:27:69.18:0,69,981	0/0:41,0:41:84.15:0,84,1185	0/0:53,0:53:99:0,132,1845	0/0:52,0:48:99:0,129,1772	0/0:38,0:38:99:0,99,1402	0/0:34,0:34:87.29:0,87,1236	0/1:81,6:67:99:208,0,1895	0/1:41,19:51:99:760,0,872	0/1:179,40:182:99:1662,0,3908	0/0:38,0:36:90.30:0,90,1276	0/0:17,0:16:45.15:0,45,643	0/0:40,0:40:99:0,111,1583	0/0:38,0:35:96.32:0,96,1375	0/0:40,0:37:99:0,108,1513	0/1:32,19:48:99:863,0,797	0/0:23,0:23:63.21:0,63,894
chr10	106242642	.	T	TC	5444.79	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=1.968;DP=656;FS=5.891;HRun=3;HaplotypeScore=74.5357;InbreedingCoeff=0.9926;MQ=77.01;MQ0=1;MQRankSum=-3.308;QD=44.27;ReadPosRankSum=-0.723;VQSLOD=3.0909;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,2012	1/1:1,8:9:21.07:336,21,0	0/0:14,0:12:25.08:0,25,432	0/0:25,0:25:68.66:0,69,868	0/0:32,0:32:93.30:0,93,1273	0/0:14,0:14:36.11:0,36,486	0/0:28,0:28:84.26:0,84,1155	1/1:0,30:30:84.28:1321,84,0	0/0:27,0:27:75.23:0,75,1030	0/0:35,0:35:99:0,102,1393	0/0:19,0:19:51.17:0,51,713	0/0:24,0:24:69.23:0,69,964	0/0:18,0:18:54.18:0,54,747	0/0:28,0:28:81.24:0,81,1108	0/0:34,0:34:96.29:0,96,1294	0/0:31,0:31:90.30:0,90,1256	0/0:33,0:33:99:0,99,1373	0/0:22,0:22:66.22:0,66,921	1/1:2,17:19:51.17:816,51,0	1/1:0,17:17:51.17:815,51,0	1/1:0,30:29:87.30:1390,87,0	0/0:24,0:24:51.22:0,51,923	0/0:15,0:15:36.12:0,36,503	0/0:22,0:22:66.16:0,66,882	0/0:19,0:19:50.82:0,51,664	0/0:16,0:16:48.15:0,48,656	1/1:1,17:18:48.16:767,48,0	0/0:4,0:4:12.04:0,12,168
chr10	106244378	.	A	AC	368.82	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=7.109;DP=514;FS=0.000;HRun=0;HaplotypeScore=93.7650;InbreedingCoeff=0.8313;MQ=42.75;MQ0=38;MQRankSum=-2.569;QD=6.15;ReadPosRankSum=3.048;VQSLOD=3.4801;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:77.08:0,77,629	0/0:5,0:5:14.95:0,15,122	0/0:25,0:4:11.51:0,12,63	0/0:31,0:3:2.96:0,3,20	0/0:23,0:23:56.83:0,57,457	0/0:11,0:11:24.23:0,24,185	0/0:18,0:17:41.08:0,41,325	0/1:12,0:9:3.76:123,0,4	0/0:11,0:10:23.38:0,23,179	0/0:25,0:23:65.51:0,66,525	0/0:20,0:18:50.87:0,51,482	0/0:18,0:17:41.87:0,42,367	0/0:19,0:18:41.37:0,41,332	0/0:11,0:11:26.36:0,26,196	0/0:23,0:21:58.67:0,59,431	0/0:14,0:13:33.33:0,33,270	0/0:28,0:26:61.18:0,61,529	0/0:24,0:23:50.49:0,50,421	1/1:16,3:14:22.26:125,22,0	1/1:14,1:15:24.35:145,24,0	1/1:6,1:5:9.21:59,9,0	0/0:14,0:14:38.26:0,38,306	0/0:19,0:19:53.21:0,53,405	0/0:11,0:9:18.32:0,18,141	0/0:17,0:16:38.86:0,39,318	0/0:36,0:30:84.78:0,85,683	1/1:7,0:5:11.72:76,12,0	0/0:19,0:18:47.12:0,47,347
chr10	106244390	.	AAAAC	A	1271.66	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=9.812;DP=587;FS=9.650;HRun=0;HaplotypeScore=123.7667;InbreedingCoeff=0.8068;MQ=43.63;MQ0=40;MQRankSum=-6.639;QD=7.75;ReadPosRankSum=-2.562;VQSLOD=1.5302;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:66.56:0,67,783	1/1:6,0:6:12.26:68,12,0	0/0:39,0:8:5.97:0,6,50	0/1:43,0:7:2.85:5,0,3	0/1:25,0:25:32.39:32,0,503	0/0:12,0:12:25.14:0,25,283	0/0:22,0:21:50.34:0,50,535	1/1:23,2:17:40.53:266,41,0	0/0:11,0:10:23.34:0,23,275	0/0:25,0:23:61.36:0,61,802	0/0:24,0:22:63.32:0,63,747	0/0:20,0:19:47.57:0,48,537	0/0:19,0:18:7.77:0,8,342	0/0:12,0:11:27.41:0,27,282	0/0:20,0:18:38.55:0,39,536	0/0:16,0:15:37.96:0,38,413	0/0:32,0:31:78.91:0,79,894	0/0:24,0:23:50.99:0,51,698	1/1:27,0:22:58.39:413,58,0	1/1:20,0:20:58.76:422,59,0	1/1:8,0:6:11.76:91,12,0	0/0:16,0:16:43.12:0,43,644	0/0:22,0:22:29.81:0,30,756	0/0:11,0:9:15.07:0,15,244	0/0:17,0:16:34.99:0,35,483	0/0:36,0:30:76.57:0,77,964	1/1:8,2:9:19.84:161,20,0	0/0:14,0:14:30.80:0,31,391
chr10	106244394	.	CCAA	C	2460.73	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.713;DP=574;FS=9.120;HRun=0;HaplotypeScore=108.3443;InbreedingCoeff=0.9507;MQ=44.11;MQ0=38;MQRankSum=-4.884;QD=26.75;ReadPosRankSum=-1.759;VQSLOD=2.8151;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:62.50:0,63,1111	1/1:6,0:6:18.05:253,18,0	0/0:42,0:9:22.13:0,22,259	0/0:45,0:7:7.26:0,7,67	0/0:23,0:23:18.02:0,18,709	0/0:10,0:10:7.81:0,8,426	0/0:21,0:20:46.75:0,47,885	1/1:4,20:18:43.08:617,43,0	0/0:12,0:11:16.79:0,17,419	0/0:26,0:24:64.33:0,64,1153	0/0:20,0:19:56.56:0,57,1120	0/0:19,0:18:44.97:0,45,792	0/0:19,0:18:22.30:0,22,655	0/0:10,0:9:23.81:0,24,426	0/0:20,0:18:45.18:0,45,726	0/0:15,0:15:38.99:0,39,685	0/0:32,0:31:77.63:0,78,1556	0/0:21,0:21:51.03:0,51,910	1/1:9,15:19:48.50:682,49,0	1/1:4,16:20:52.25:753,52,0	1/1:3,6:7:11.71:152,12,0	0/0:17,0:17:47.94:0,48,901	0/0:23,0:23:58.92:0,59,1248	0/0:12,0:10:20.79:0,21,357	0/0:15,0:15:33.87:0,34,800	0/0:35,0:30:78.09:0,78,1593	1/1:3,6:8:14.84:187,15,0	0/0:14,0:14:42.14:0,42,842
chr10	106244397	.	A	AC	632.98	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.427;DP=575;FS=0.000;HRun=0;HaplotypeScore=101.7307;InbreedingCoeff=0.9298;MQ=45.59;MQ0=34;MQRankSum=-4.403;QD=6.81;ReadPosRankSum=0.197;VQSLOD=3.0464;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:65.51:0,66,776	1/1:0,6:6:17.73:233,18,0	0/0:46,0:10:22.90:0,23,211	0/0:48,0:11:13.21:0,13,101	0/0:25,0:25:56.75:0,57,612	0/0:10,0:10:23.80:0,24,279	0/0:21,0:20:56.25:0,56,658	1/1:25,0:19:19.26:186,19,0	0/0:11,0:10:25.22:0,25,294	0/0:24,0:22:58.36:0,58,748	0/0:21,0:19:57.12:0,57,733	0/0:19,0:18:45.08:0,45,562	0/0:19,0:18:41.70:0,42,480	0/0:9,0:8:24.03:0,24,292	0/0:20,0:18:50.49:0,50,562	0/0:14,0:14:41.40:0,41,465	0/0:31,0:31:78.62:0,79,1010	0/0:22,0:22:50.68:0,51,605	1/1:23,0:20:11.61:145,12,0	1/1:21,0:21:7.07:140,7,0	1/1:9,0:7:6.51:36,7,0	0/0:17,0:17:48.09:0,48,596	0/0:22,0:22:63.20:0,63,856	0/0:13,0:11:24.95:0,25,304	0/0:14,0:14:39.08:0,39,511	0/0:33,0:29:78.23:0,78,1041	1/1:9,0:8:8.01:65,8,0	0/0:14,0:14:42.07:0,42,531
chr10	106245569	.	TCCGCC	T	128.10	PASS	AC=6;AF=0.136;AN=44;BaseQRankSum=2.901;DP=259;FS=1.561;HRun=0;HaplotypeScore=67.3815;InbreedingCoeff=0.5794;MQ=83.96;MQ0=1;MQRankSum=1.939;QD=3.20;ReadPosRankSum=-0.404;VQSLOD=1.5754;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:24.08:0,24,672	./.	0/0:15,0:13:18.18:0,18,302	0/0:26,0:20:29.11:0,29,377	./.	0/0:7,0:7:12.04:0,12,323	0/0:11,0:11:27.09:0,27,756	1/1:5,3:8:5.98:66,6,0	0/0:5,0:5:12.04:0,12,346	0/0:12,0:12:24.08:0,24,638	./.	0/0:6,0:6:6.02:0,6,173	0/0:7,0:7:6.02:0,6,123	0/0:8,0:8:13.29:0,13,325	0/0:6,0:6:9.03:0,9,245	0/0:6,0:6:15.05:0,15,409	0/0:26,0:26:60.21:0,60,1615	0/0:19,0:19:39.13:0,39,1028	1/1:6,1:7:3.01:57,3,0	./.	1/1:13,12:25:5.89:114,6,0	0/0:3,0:3:3.01:0,3,86	0/0:3,0:3:3.01:0,3,87	0/0:15,0:15:36.12:0,36,1015	0/0:2,0:2:3.01:0,3,62	0/0:9,0:9:24.08:0,24,689	./.	./.
chr10	106246264	.	GC	G	6093.76	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.323;DP=725;FS=4.942;HRun=2;HaplotypeScore=80.5011;InbreedingCoeff=0.9995;MQ=76.28;MQ0=0;MQRankSum=-1.251;QD=36.49;ReadPosRankSum=-1.660;VQSLOD=4.6898;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1794	1/1:0,14:14:39.13:506,39,0	0/0:11,0:11:29.57:0,30,358	0/0:17,1:18:25.48:0,25,513	0/0:17,0:17:51.17:0,51,758	0/0:32,0:32:96.28:0,96,1376	0/0:37,0:37:99:0,111,1655	1/1:0,37:37:99:1294,102,0	0/0:25,0:25:75.24:0,75,1103	0/0:24,0:24:69.22:0,69,999	0/0:17,0:17:48.16:0,48,719	0/0:32,0:32:96.31:0,96,1419	0/0:25,0:25:75.25:0,75,1121	0/0:32,0:32:96.32:0,96,1433	0/0:32,0:32:93.30:0,93,1375	0/0:23,0:23:69.23:0,69,1034	0/0:48,0:48:99:0,144,2135	0/0:13,0:13:39.13:0,39,583	1/1:0,27:27:81.24:1023,81,0	1/1:1,18:19:54.18:701,54,0	1/1:0,39:39:99:1441,111,0	0/0:20,0:20:57.17:0,57,814	0/0:15,0:15:42.14:0,42,629	0/0:33,0:33:99:0,99,1484	0/0:27,0:27:81.27:0,81,1212	0/0:24,0:24:69.23:0,69,1015	1/1:0,31:31:87.28:1128,87,0	0/0:13,0:13:39.13:0,39,584
chr10	106246670	.	GCA	G	5897.65	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.578;DP=793;FS=7.491;HRun=0;HaplotypeScore=98.1481;InbreedingCoeff=1.0000;MQ=84.30;MQ0=0;MQRankSum=-4.922;QD=42.74;ReadPosRankSum=0.071;VQSLOD=5.8605;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.31:0,90,1726	1/1:0,14:14:39.13:597,39,0	0/0:30,0:30:90.20:0,90,1613	0/0:21,0:21:63.16:0,63,1075	0/0:26,0:26:75.73:0,76,1450	0/0:36,0:36:99:0,108,2085	0/0:23,0:23:69.24:0,69,1332	1/1:1,21:22:54.17:801,54,0	0/0:36,0:36:99:0,108,2086	0/0:34,0:34:99:0,102,1971	0/0:20,0:20:54.19:0,54,1043	0/0:40,0:40:99:0,117,2194	0/0:29,0:29:87.28:0,87,1629	0/0:23,0:23:66.23:0,66,1267	0/0:38,0:38:99:0,108,2086	0/0:40,0:40:99:0,120,2300	0/0:28,0:28:84.27:0,84,1588	0/0:30,0:30:90.31:0,90,1737	1/1:1,20:21:57.19:873,57,0	1/1:1,24:25:72.24:1102,72,0	1/1:0,32:32:93.32:1424,93,0	0/0:20,0:20:57.20:0,57,1100	0/0:17,0:17:51.17:0,51,984	0/0:29,0:29:87.30:0,87,1668	0/0:48,0:48:99:0,144,2747	0/0:39,0:39:99:0,117,2261	1/1:0,24:24:72.24:1100,72,0	0/0:17,0:17:51.17:0,51,985
chr10	106246747	.	CCA	C	4874.79	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.926;DP=758;FS=8.202;HRun=0;HaplotypeScore=98.1964;InbreedingCoeff=0.9991;MQ=69.02;MQ0=0;MQRankSum=-1.461;QD=39.00;ReadPosRankSum=-1.738;VQSLOD=6.2465;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.31:0,90,1678	1/1:0,7:7:21.07:309,21,0	0/0:31,0:29:43.52:0,44,1192	0/0:27,0:26:75.25:0,75,1333	0/0:22,0:22:66.21:0,66,1186	0/0:35,0:35:99:0,99,1819	0/0:28,0:28:81.28:0,81,1481	1/1:2,27:29:75.24:1084,75,0	0/0:32,0:32:96.33:0,96,1784	0/0:29,0:29:84.29:0,84,1557	0/0:19,0:19:57.20:0,57,1055	0/0:31,0:31:93.28:0,93,1670	0/0:29,0:29:87.30:0,87,1610	0/0:29,0:29:84.27:0,84,1540	0/0:39,0:39:99:0,114,2080	0/0:39,0:39:99:0,117,2184	0/0:24,0:24:72.25:0,72,1335	0/0:30,0:30:90.31:0,90,1686	1/1:3,20:23:66.22:970,66,0	1/1:1,11:12:36.12:525,36,0	1/1:4,20:24:57.19:839,57,0	0/0:30,0:30:90.31:0,90,1646	0/0:27,0:27:72.23:0,72,1304	0/0:31,0:31:87.27:0,87,1624	0/0:25,0:25:69.24:0,69,1279	0/0:34,0:34:99:0,102,1909	1/1:3,27:30:78.26:1148,78,0	0/0:11,0:11:33.11:0,33,618
chr10	106246991	.	CCTCAGTGCCCTCTTGG	C	9371.55	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.295;DP=823;FS=5.846;HRun=0;HaplotypeScore=343.9221;InbreedingCoeff=0.9632;MQ=74.30;MQ0=0;MQRankSum=-13.462;QD=58.94;ReadPosRankSum=0.541;VQSLOD=3.5894;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,181,12823	1/1:0,6:6:2.94:18,3,0	0/0:17,0:17:51.10:0,51,2530	0/0:19,0:19:51.14:0,51,2872	0/0:30,0:30:90.26:0,90,5940	0/0:24,0:24:69.20:0,69,4199	0/0:33,0:33:99:0,99,6366	1/1:1,23:24:65.30:1054,65,0	0/0:28,0:28:81.21:0,81,4701	0/0:34,0:34:96.32:0,96,5929	0/0:13,0:13:39.12:0,39,2680	0/0:33,0:33:99:0,99,6804	0/0:27,0:27:78.20:0,78,4907	0/0:32,0:32:90.27:0,90,5869	0/0:36,0:36:99:0,108,6861	0/0:46,0:46:99:0,129,8678	0/0:39,0:39:99:0,117,7560	0/0:37,0:37:99:0,105,6685	1/1:0,16:16:47.99:1346,48,0	1/1:1,19:20:42.14:1983,42,0	1/1:4,56:60:26.21:1139,26,0	0/0:29,0:29:87.26:0,87,5316	0/0:23,0:23:69.22:0,69,4731	0/0:37,0:37:99:0,105,6368	0/0:30,0:30:87.29:0,87,6374	0/0:28,0:28:84.29:0,84,6143	1/1:1,32:33:84.29:3830,84,0	0/0:8,0:8:24.08:0,24,1788
chr10	106247367	.	G	GTTGACAGC	13243.81	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-1.517;DP=764;FS=3.839;HRun=0;HaplotypeScore=190.8715;InbreedingCoeff=0.9989;MQ=78.93;MQ0=0;MQRankSum=-14.333;QD=85.44;ReadPosRankSum=-1.329;VQSLOD=4.8194;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,111,3070	1/1:3,5:9:24.08:940,24,0	0/0:27,0:27:69.21:0,69,1723	0/0:13,0:13:32.23:0,32,825	0/0:30,0:30:84.29:0,84,2285	0/0:30,0:30:87.30:0,87,2435	0/0:41,0:41:99:0,117,3101	1/1:17,13:30:63.22:2592,63,0	0/0:28,0:28:81.25:0,81,2106	0/0:20,0:20:52.97:0,53,1297	0/0:14,0:14:39.13:0,39,1072	0/0:35,0:35:99:0,102,2797	0/0:30,0:30:84.29:0,84,2347	0/0:35,0:35:99:0,105,2917	0/0:37,0:37:99:0,108,2859	0/0:34,0:33:99:0,99,2784	0/0:31,0:31:90.30:0,90,2487	0/0:15,0:15:45.15:0,45,1269	1/1:12,12:28:81.26:2839,81,0	1/1:9,4:14:26.97:900,27,0	1/1:12,16:38:51.65:1942,52,0	0/0:23,0:23:63.22:0,63,1709	0/0:28,0:28:75.20:0,75,1906	0/0:42,0:42:99:0,120,3176	0/0:13,0:13:39.13:0,39,1074	0/0:33,0:33:90.28:0,90,2333	1/1:11,23:36:93.32:4031,93,0	0/0:8,0:8:24.08:0,24,644
chr10	106247667	.	C	CT	5529.50	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-12.252;DP=738;FS=0.340;HRun=5;HaplotypeScore=69.8694;InbreedingCoeff=0.9914;MQ=82.63;MQ0=0;MQRankSum=-1.979;QD=31.96;ReadPosRankSum=-0.849;VQSLOD=5.0100;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,1241	1/1:2,8:10:18.06:237,18,0	0/0:27,1:28:11.55:0,12,509	0/0:19,0:19:45.11:0,45,480	0/0:33,0:33:84.17:0,84,881	0/0:22,0:22:60.13:0,60,636	0/0:20,0:20:54.13:0,54,580	1/1:3,30:33:90.24:1121,90,0	0/0:26,0:26:69.17:0,69,741	0/0:26,0:26:63.15:0,63,677	0/0:23,0:23:60.15:0,60,644	0/0:31,0:31:84.21:0,84,903	0/0:26,0:26:69.17:0,69,741	0/0:18,0:18:54.14:0,54,580	0/0:26,0:26:69.17:0,69,741	0/0:18,0:18:48.10:0,48,507	0/0:37,0:37:99:0,105,1118	0/0:24,0:24:69.17:0,69,739	1/1:6,23:29:69.20:876,69,0	1/1:2,24:26:63.20:821,63,0	1/1:3,38:41:99:1421,108,0	0/0:32,0:32:93.23:0,93,999	0/0:23,0:23:63.14:0,63,669	0/0:25,0:25:72.16:0,72,765	0/0:19,0:19:57.14:0,57,613	0/0:31,0:31:84.20:0,84,897	1/1:3,31:34:81.26:1054,81,0	0/0:17,0:17:42.10:0,42,451
chr10	106247895	.	G	GACAA	3524.56	PASS	AB=0.657;AC=11;AF=0.196;AN=56;BaseQRankSum=2.489;DP=679;FS=13.255;HRun=0;HaplotypeScore=115.4466;InbreedingCoeff=0.8781;MQ=61.82;MQ0=6;MQRankSum=-7.986;QD=32.34;ReadPosRankSum=-3.614;VQSLOD=2.0601;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:33.67:0,34,1307	1/1:3,4:7:15.05:365,15,0	0/0:28,0:19:24.67:0,25,332	0/0:24,0:17:33.03:0,33,498	0/0:17,0:17:24.07:0,24,368	0/0:23,0:23:60.20:0,60,983	0/0:43,0:43:99:0,102,1606	1/1:14,8:22:33.11:755,33,0	0/0:22,0:22:57.18:0,57,908	0/0:17,0:17:36.12:0,36,590	0/0:12,0:12:27.08:0,27,418	0/0:37,0:38:81.25:0,81,1276	0/0:27,0:27:39.13:0,39,626	0/0:20,0:20:42.14:0,42,685	0/0:32,0:32:72.25:0,72,1172	0/0:38,0:38:87.24:0,87,1323	0/0:32,0:32:37.69:0,38,965	0/0:29,0:29:54.15:0,54,856	1/1:12,4:15:24.07:536,24,0	1/1:7,11:21:41.94:720,42,0	0/1:11,10:23:64.98:505,0,65	0/0:17,0:18:42.14:0,42,683	0/0:21,0:21:45.14:0,45,704	0/0:29,0:29:66.22:0,66,1071	0/0:9,0:9:15.05:0,15,241	0/0:32,0:32:57.19:0,57,934	1/1:12,5:18:27.09:643,27,0	0/0:17,0:17:51.17:0,51,835
chr10	106249315	.	C	CCT	234.43	PASS	AB=0.881;AC=12;AF=0.214;AN=56;BaseQRankSum=5.657;DP=283;FS=10.971;HRun=0;HaplotypeScore=60.0903;InbreedingCoeff=-0.1997;MQ=55.68;MQ0=1;MQRankSum=-4.138;QD=2.11;ReadPosRankSum=2.364;VQSLOD=0.3501;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,1:24:51.15:0,51,747	0/1:2,1:3:37.80:38,0,40	0/0:5,0:5:12:0,12,139	0/0:5,0:5:2.08:0,2,173	0/0:7,0:7:5.89:0,6,92	0/1:17,0:17:4.28:4,0,504	0/0:13,1:14:2.49:0,2,336	0/0:9,0:8:24.04:0,24,332	0/1:10,5:15:99:108,0,302	0/1:6,1:7:36.58:37,0,246	0/0:5,0:5:6.02:0,6,92	0/0:14,0:14:24.03:0,24,347	0/1:12,1:13:18.85:19,0,334	0/0:5,1:6:6.66:0,7,175	0/0:16,1:17:24.08:0,24,362	0/1:11,3:14:20.18:20,0,350	0/0:15,0:15:0.71:0,1,368	0/0:9,0:9:27.09:0,27,412	0/1:12,0:11:14.45:14,0,378	0/0:4,0:4:3.01:0,3,45	0/0:19,0:18:21.47:0,21,310	0/0:7,0:7:9.03:0,9,137	0/0:8,0:8:15.05:0,15,224	0/1:7,1:8:15.54:16,0,174	0/1:5,1:6:45.70:46,0,76	0/1:14,1:14:15.70:16,0,513	0/0:3,0:2:5.98:0,6,66	1/1:0,1:1:3.01:58,3,0
chr10	106257325	.	A	ACATT	3512.65	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-3.081;DP=685;FS=11.972;HRun=0;HaplotypeScore=109.8546;InbreedingCoeff=0.9136;MQ=58.64;MQ0=1;MQRankSum=0.359;QD=22.96;ReadPosRankSum=-2.370;VQSLOD=2.4299;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:60.16:0,60,900	0/0:9,0:9:12.04:0,12,192	0/0:26,0:17:2.97:0,3,22	0/0:12,0:8:2.72:0,3,47	0/0:40,0:40:69.19:0,69,1051	0/0:21,0:21:36.08:0,36,504	0/0:25,0:25:39.12:0,39,592	1/1:40,0:39:29.24:392,29,0	0/0:17,0:17:30.08:0,30,452	0/0:32,0:32:57.19:0,57,907	0/0:20,0:20:30.10:0,30,478	0/0:27,0:27:60.16:0,60,885	0/0:23,0:23:54.17:0,54,830	0/0:20,0:20:51.16:0,51,788	0/0:20,0:20:48.13:0,48,717	0/0:19,0:19:33.11:0,33,525	0/0:25,0:25:30.10:0,30,478	0/0:33,0:33:45.50:0,45,944	1/1:19,11:29:35.95:612,36,0	1/1:8,16:25:39.10:865,39,0	1/1:11,15:27:30.10:702,30,0	0/0:26,0:26:33.10:0,33,502	0/0:22,0:22:37.39:0,37,618	0/0:24,0:24:30.10:0,30,473	0/0:16,0:16:30.10:0,30,479	0/0:25,0:25:51.16:0,51,773	1/1:12,18:30:42.10:942,42,0	0/0:16,0:16:30.07:0,30,452
chr10	106257362	.	TTCTCTC	T	324.01	PASS	AC=20;AF=0.625;AN=32;BaseQRankSum=3.087;DP=577;FS=3.171;HRun=0;HaplotypeScore=124.5931;InbreedingCoeff=0.3890;MQ=51.30;MQ0=21;MQRankSum=1.230;QD=1.34;ReadPosRankSum=1.787;VQSLOD=2.5629;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:31:2.83:20,3,0	./.	./.	./.	./.	0/0:14,0:14:0.47:0,0,1	1/1:19,0:19:2.71:59,3,0	./.	./.	0/0:32,0:31:7.57:0,8,117	./.	1/1:32,0:32:1.28:50,1,0	1/1:21,0:21:4.56:58,5,0	1/1:23,0:22:3.14:18,3,0	1/1:18,0:20:3:42,3,0	0/0:20,0:20:11.95:0,12,139	0/0:16,1:17:0.89:0,1,4	1/1:29,1:28:3:59,3,0	1/1:23,0:23:3.01:42,3,0	1/1:16,0:18:3.01:42,3,0	./.	./.	./.	0/0:14,6:20:0:0,0,0	./.	0/0:27,0:25:14.08:0,14,251	1/1:22,0:23:3.01:42,3,0	./.
chr10	106260655	.	TA	T	2978.36	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.626;DP=602;FS=0.381;HRun=9;HaplotypeScore=61.6823;InbreedingCoeff=0.9953;MQ=63.79;MQ0=0;MQRankSum=-2.069;QD=20.54;ReadPosRankSum=1.164;VQSLOD=4.1344;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,1257	1/1:0,6:6:18.01:165,18,0	0/0:11,0:11:24.04:0,24,256	0/0:13,0:9:17.95:0,18,175	0/0:19,0:19:54.12:0,54,603	0/0:23,0:23:60.03:0,60,636	0/0:21,0:21:57.14:0,57,636	1/1:6,24:30:65.99:590,66,0	0/0:20,0:20:48.13:0,48,545	0/0:19,0:19:54.15:0,54,615	0/0:16,0:16:42.11:0,42,468	0/0:19,0:19:42.10:0,42,464	0/0:25,0:25:54.12:0,54,593	0/0:19,0:19:51.15:0,51,589	0/0:23,0:23:63.13:0,63,703	0/0:24,0:24:69.21:0,69,796	0/0:28,2:30:23.33:0,23,763	0/0:33,0:33:90.22:0,90,1007	1/1:3,21:24:59.99:549,60,0	1/1:3,20:23:54.02:494,54,0	1/1:1,25:26:63.03:576,63,0	0/0:13,0:13:36.10:0,36,407	0/0:19,0:19:51.15:0,51,582	0/0:12,0:12:36.07:0,36,402	0/0:22,0:22:60.14:0,60,662	0/0:25,0:25:69.18:0,69,772	1/1:5,31:36:87.03:792,87,0	0/0:10,0:10:24.06:0,24,267
chr10	106261282	.	G	GT	736.14	PASS	AB=1.000;AC=13;AF=0.250;AN=52;BaseQRankSum=5.567;DP=265;FS=60.777;HRun=0;HaplotypeScore=53.7847;InbreedingCoeff=0.6406;MQ=84.14;MQ0=2;MQRankSum=-2.925;QD=7.59;ReadPosRankSum=6.956;VQSLOD=1.1932;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:14.95:0,15,121	1/1:2,1:3:5.87:42,6,0	0/0:39,0:20:18.69:0,19,268	0/1:16,0:10:0.23:0,0,64	./.	0/0:9,0:9:13.71:0,14,90	0/0:12,0:12:21.23:0,21,148	1/1:13,7:20:16.76:265,17,0	0/0:10,0:10:17.76:0,18,135	0/0:5,0:5:3:0,3,28	0/0:3,0:3:2.98:0,3,22	0/0:13,0:13:23.89:0,24,192	0/0:4,0:4:5.99:0,6,50	0/0:5,0:5:8.98:0,9,72	0/0:4,0:4:9:0,9,80	0/0:8,0:8:14.73:0,15,111	0/0:18,0:18:40.90:0,41,319	0/0:18,0:18:32.15:0,32,259	1/1:7,3:10:17.97:118,18,0	1/1:1,3:4:8.56:63,9,0	1/1:15,10:25:1.26:110,1,0	0/0:1,0:1:0:0,0,0	./.	0/0:4,0:4:5.98:0,6,48	0/0:1,0:1:2.99:0,3,24	0/0:5,0:5:6.01:0,6,56	1/1:5,12:19:44.42:295,44,0	0/0:2,0:2:5.74:0,6,38
chr10	106261292	.	G	GTGT	794	PASS	AB=0.857;AC=11;AF=0.229;AN=48;BaseQRankSum=5.488;DP=262;FS=66.426;HRun=0;HaplotypeScore=65.6334;InbreedingCoeff=0.4135;MQ=81.81;MQ0=2;MQRankSum=-3.905;QD=6.96;ReadPosRankSum=4.205;VQSLOD=-0.2861;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:11.60:0,12,99	1/1:3,0:4:1.90:24,2,0	0/0:36,0:18:46.46:0,46,497	0/1:14,0:9:7.71:8,0,75	./.	0/0:8,0:8:15.74:0,16,149	0/0:10,0:10:23.53:0,24,256	1/1:16,0:23:14.48:240,14,0	0/0:8,0:8:10.13:0,10,118	0/0:4,0:4:3.01:0,3,37	./.	0/0:12,0:12:24.07:0,24,294	0/0:2,0:2:6:0,6,72	0/0:3,0:3:9.03:0,9,140	0/0:4,0:4:6.02:0,6,96	0/0:7,0:7:14.95:0,15,181	0/0:16,0:16:40.95:0,41,583	0/0:18,0:18:37.61:0,38,509	0/1:17,0:19:13.67:124,0,14	0/1:3,0:6:11.83:74,0,12	1/1:18,0:28:7.77:92,8,0	0/0:1,0:1:3.01:0,3,48	./.	0/0:7,0:7:14.98:0,15,173	0/0:2,0:2:2.98:0,3,21	./.	1/1:2,1:20:26.52:377,27,0	0/0:1,0:1:3.01:0,3,43
chr10	106263046	.	T	TA	2650.75	PASS	AB=0.796;AC=12;AF=0.214;AN=56;BaseQRankSum=-7.800;DP=574;FS=1.363;HRun=10;HaplotypeScore=55.5628;InbreedingCoeff=0.8106;MQ=64.13;MQ0=1;MQRankSum=-0.154;QD=19.07;ReadPosRankSum=-3.100;VQSLOD=3.2540;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:73.92:0,74,594	1/1:1,9:10:24.01:243,24,0	0/0:9,0:8:1.70:0,2,67	0/1:8,0:7:10.31:10,0,88	0/0:32,0:32:80.88:0,81,662	0/0:21,0:21:56.92:0,57,468	0/0:13,0:13:29.95:0,30,246	1/1:8,22:30:69.13:715,69,0	0/0:12,0:12:32.95:0,33,268	0/0:25,0:25:56.91:0,57,468	0/0:24,0:24:59.90:0,60,493	0/0:20,0:20:53.82:0,54,428	0/0:19,0:19:47.91:0,48,390	0/0:21,0:21:53.89:0,54,437	0/0:20,0:20:53.93:0,54,443	0/0:23,0:23:52.97:0,53,425	0/0:25,0:25:59.88:0,60,489	0/0:20,0:20:50.86:0,51,409	1/1:5,17:22:43.33:536,43,0	1/1:7,15:22:20.43:410,20,0	0/1:5,11:16:0.57:301,0,1	0/0:11,0:11:26.95:0,27,222	0/0:25,0:26:67.94:0,68,547	0/0:19,0:19:53.94:0,54,443	0/0:19,0:19:50.90:0,51,414	0/0:26,0:26:58.94:0,59,472	1/1:8,20:30:59.97:614,60,0	0/0:18,0:19:52.96:0,53,425
chr10	106265259	.	CTGTGTAACGCAGT	C	1871.94	PASS	AB=0.847;AC=5;AF=0.089;AN=56;BaseQRankSum=11.830;DP=944;FS=4.247;HRun=0;HaplotypeScore=347.4899;InbreedingCoeff=-0.1034;MQ=61.78;MQ0=2;MQRankSum=-2.678;QD=14.86;ReadPosRankSum=1.268;VQSLOD=0.9272;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,181,8378	0/1:13,1:14:85.16:101,0,85	0/0:21,0:15:45.14:0,45,1087	0/0:21,0:19:47.32:0,47,1107	0/0:20,0:20:60.19:0,60,2418	0/0:22,0:22:66.23:0,66,2435	0/0:43,0:43:99:0,129,5623	0/0:17,0:16:4.04:0,4,161	0/0:48,0:48:99:0,144,6849	0/0:49,0:49:99:0,148,6590	0/0:16,0:16:46.40:0,46,2409	0/0:49,0:49:99:0,147,6761	0/0:39,0:39:99:0,117,4825	0/0:33,0:33:99:0,99,4083	0/0:40,0:40:99:0,117,5535	0/0:45,0:45:99:0,132,5422	0/0:50,0:50:99:0,151,6675	0/0:32,0:32:96.28:0,96,3995	0/1:7,2:9:99:219,0,129	0/1:18,7:25:99:615,0,169	0/1:52,0:52:14:14,0,581	0/0:42,0:42:99:0,126,4712	0/0:28,0:28:81.28:0,81,3290	0/0:59,0:59:99:0,178,8117	0/0:26,0:26:75.26:0,75,3777	0/0:47,0:47:99:0,141,7009	0/1:15,11:26:99:1039,0,125	0/0:10,0:10:30.10:0,30,1236
chr10	106268472	.	G	GGATTGATTGATT	10305.06	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=0.865;DP=673;FS=0.000;HRun=0;HaplotypeScore=222.5445;InbreedingCoeff=0.9893;MQ=67.01;MQ0=0;MQRankSum=-10.776;QD=68.25;ReadPosRankSum=-6.488;VQSLOD=3.1465;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:63.22:0,63,2017	1/1:3,0:8:12.04:308,12,0	0/0:22,0:22:17.95:0,18,882	0/0:17,0:17:27.08:0,27,698	0/0:35,0:35:84.29:0,84,2845	0/0:21,0:21:42.13:0,42,1393	0/0:18,0:18:42.13:0,42,1258	1/1:46,0:46:69.21:3040,69,0	0/0:27,0:27:63.22:0,63,2106	0/0:30,0:30:69.23:0,69,1996	0/0:22,0:22:51.17:0,51,1575	0/0:25,0:25:54.19:0,54,1735	0/0:17,0:17:42.14:0,42,1439	0/0:22,0:22:42.13:0,42,1390	0/0:35,0:35:87.28:0,87,2757	0/0:25,0:25:51.16:0,51,1702	0/0:28,0:28:66.20:0,66,2054	0/0:12,0:12:21.07:0,21,737	1/1:18,6:26:48.14:2099,48,0	1/1:18,8:28:48.10:2281,48,0	1/1:9,3:14:18.02:760,18,0	0/0:21,0:21:45.13:0,45,1411	0/0:22,0:22:60.13:0,60,1740	0/0:23,0:22:54.13:0,54,1591	0/0:28,0:28:54.19:0,54,1849	0/0:30,0:30:72.25:0,72,2467	1/1:14,14:29:33.11:1818,33,0	0/0:14,0:14:36.09:0,36,1101
chr10	106271708	.	T	TA	53.49	PASS	AB=0.916;AC=9;AF=0.167;AN=54;BaseQRankSum=6.744;DP=274;FS=4.435;HRun=0;HaplotypeScore=35.4575;InbreedingCoeff=0.2001;MQ=59.20;MQ0=2;MQRankSum=-1.536;QD=0.64;ReadPosRankSum=1.191;VQSLOD=0.9883;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.10:0,48,630	0/0:3,0:3:8.34:0,8,44	1/1:10,0:4:2.51:9,3,0	0/1:10,0:5:7.22:7,0,62	0/0:13,0:13:39.12:0,39,530	0/0:23,0:23:69.23:0,69,964	0/0:1,0:1:3:0,3,27	0/1:33,1:33:3.66:4,0,158	0/0:7,0:7:21.06:0,21,278	0/0:10,0:10:30.08:0,30,376	0/0:8,0:8:24.06:0,24,304	0/0:3,0:3:9.03:0,9,126	0/0:4,0:4:12.04:0,12,165	0/0:5,0:5:15.05:0,15,210	0/0:9,0:9:27.05:0,27,341	0/0:6,0:6:15.05:0,15,210	0/0:20,0:20:60.19:0,60,822	0/0:25,0:25:66.16:0,66,866	0/1:9,0:9:4.07:4,0,59	0/1:2,1:3:13.81:14,0,23	1/1:4,2:6:5.96:118,6,0	./.	0/0:2,0:2:6.02:0,6,84	0/0:3,0:3:9.02:0,9,109	0/0:14,0:14:42.13:0,42,573	0/0:11,0:11:33.10:0,33,444	0/1:10,2:12:16.63:17,0,72	0/0:7,0:7:21.07:0,21,285
chr10	106271709	.	T	TTTA	571.53	PASS	AB=0.971;AC=9;AF=0.167;AN=54;BaseQRankSum=7.667;DP=276;FS=1.654;HRun=0;HaplotypeScore=42.9961;InbreedingCoeff=0.2274;MQ=59.27;MQ0=2;MQRankSum=-2.677;QD=7.42;ReadPosRankSum=0.032;VQSLOD=2.2414;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.14:0,42,691	0/1:4,0:4:15.94:16,0,49	0/1:10,0:4:20.65:21,0,39	0/0:10,0:5:5.52:0,6,57	0/0:14,0:14:36.12:0,36,595	0/0:23,0:23:69.24:0,69,1138	0/0:1,0:1:3:0,3,27	0/1:34,0:33:99:247,0,200	0/0:7,0:7:21.06:0,21,325	0/0:10,0:10:27.07:0,27,389	0/0:8,0:8:21.06:0,21,324	0/0:3,0:3:9.03:0,9,137	0/0:4,0:4:12.04:0,12,184	0/0:5,0:5:15.05:0,15,248	0/0:9,0:9:24.07:0,24,375	0/0:6,0:6:18.05:0,18,273	0/0:20,0:20:57.19:0,57,942	0/0:26,0:26:60.19:0,60,956	0/1:9,0:9:50.24:50,0,94	1/1:2,1:3:8.89:82,9,0	1/1:3,2:5:12.04:198,12,0	./.	0/0:2,0:2:6.02:0,6,99	0/0:3,0:3:9.02:0,9,124	0/0:14,0:14:42.14:0,42,660	0/0:11,0:11:32.93:0,33,486	0/1:10,1:12:79.96:101,0,80	0/0:7,0:7:21.02:0,21,317
chr10	106272475	.	A	AG	4592.21	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-12.887;DP=701;FS=1.189;HRun=5;HaplotypeScore=64.2332;InbreedingCoeff=0.9905;MQ=83.32;MQ0=0;MQRankSum=-2.174;QD=32.34;ReadPosRankSum=-1.116;VQSLOD=4.9774;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1094	1/1:1,5:6:15.05:197,15,0	0/0:35,0:35:87.18:0,87,902	0/0:25,0:25:57.11:0,57,595	0/0:27,0:27:75.19:0,75,806	0/0:19,0:19:51.13:0,51,548	0/0:28,0:28:72.18:0,72,774	1/1:5,29:34:84.21:1043,84,0	0/0:17,0:17:48.12:0,48,515	0/0:23,0:23:69.17:0,69,736	0/0:18,0:18:48.12:0,48,516	0/0:23,0:23:69.17:0,69,742	0/0:23,0:23:69.15:0,69,731	0/0:39,0:39:99:0,105,1128	0/0:31,0:31:81.18:0,81,861	0/0:30,0:30:78.18:0,78,831	0/0:20,0:20:54.14:0,54,580	0/0:30,0:30:84.21:0,84,903	1/1:3,15:18:51.14:650,51,0	1/1:3,22:25:63.20:827,63,0	1/1:2,31:33:75.24:987,75,0	0/0:31,0:31:93.20:0,93,983	0/0:17,0:17:48.12:0,48,516	0/0:33,0:33:93.23:0,93,1000	0/0:19,0:19:57.14:0,57,613	0/0:30,0:30:84.20:0,84,895	1/1:4,22:26:69.21:888,69,0	0/0:6,0:6:12:0,12,119
chr10	106274072	.	TA	T	1441.82	PASS	AB=0.942;AC=14;AF=0.250;AN=56;BaseQRankSum=5.348;DP=533;FS=1.494;HRun=12;HaplotypeScore=63.8448;InbreedingCoeff=0.7803;MQ=72.31;MQ0=0;MQRankSum=0.243;QD=10.68;ReadPosRankSum=0.120;VQSLOD=3.0685;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,2:32:25.64:0,26,606	1/1:3,5:8:14.91:116,15,0	0/1:12,1:10:9.36:9,0,53	0/0:9,0:8:11.90:0,12,92	0/0:25,0:25:57.58:0,58,580	0/1:20,1:21:7.53:8,0,318	0/0:19,1:21:30.70:0,31,478	1/1:8,19:27:53.67:412,54,0	0/0:8,0:9:26.88:0,27,252	0/0:24,0:26:50.76:0,51,479	0/0:25,0:25:45.02:0,45,438	0/0:20,0:20:39.05:0,39,378	0/0:18,0:20:38.68:0,39,379	0/0:19,2:21:15.79:0,16,331	0/0:19,1:20:12.83:0,13,307	0/0:23,0:23:57.05:0,57,562	0/0:30,3:33:60.89:0,61,788	0/0:15,0:17:41.91:0,42,404	1/1:4,11:15:32.87:255,33,0	1/1:1,15:16:41.84:325,42,0	1/1:4,8:14:8.43:155,8,0	0/0:15,0:15:34.30:0,34,333	0/0:16,0:20:45.19:0,45,403	0/0:21,1:25:51.29:0,51,469	0/0:10,1:11:5.06:0,5,223	0/0:17,0:17:42.03:0,42,406	1/1:2,19:21:44.80:348,45,0	0/0:9,0:9:16.28:0,16,155
chr10	106274649	.	A	AC	2229.07	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.546;DP=574;FS=1.549;HRun=0;HaplotypeScore=64.1533;InbreedingCoeff=0.9323;MQ=68.37;MQ0=13;MQRankSum=1.711;QD=22.98;ReadPosRankSum=-1.067;VQSLOD=4.6924;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,1656	1/1:0,1:1:3.01:39,3,0	0/0:56,0:19:32.57:0,33,292	0/0:44,0:22:21.24:0,21,235	0/0:19,0:19:57.16:0,57,745	0/0:20,0:20:60.20:0,60,822	0/0:18,0:17:45.14:0,45,602	1/1:2,20:22:54.60:674,55,0	0/0:14,0:14:42.13:0,42,567	0/0:13,0:12:33.10:0,33,433	0/0:7,0:7:14.62:0,15,209	0/0:12,0:12:36.01:0,36,435	0/0:15,0:15:42.14:0,42,582	0/0:9,0:9:24.08:0,24,333	0/0:16,0:16:48.14:0,48,635	0/0:17,0:17:51.13:0,51,680	0/0:47,0:46:99:0,132,1697	0/0:26,0:26:78.19:0,78,1028	1/1:3,25:27:66.15:814,66,0	1/1:1,15:16:44.69:554,45,0	1/1:1,11:11:23.98:270,24,0	0/0:6,0:6:18.06:0,18,251	0/0:12,0:11:30.07:0,30,386	0/0:31,0:31:90.29:0,90,1239	0/0:7,0:7:18.05:0,18,237	0/0:30,0:30:90.25:0,90,1183	1/1:17,1:17:5.88:53,6,0	0/0:15,0:15:45.08:0,45,530
chr10	106274650	.	A	AC	2359.46	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=11.367;DP=572;FS=2.061;HRun=2;HaplotypeScore=62.4974;InbreedingCoeff=0.7658;MQ=68.47;MQ0=12;MQRankSum=1.410;QD=11.98;ReadPosRankSum=-2.395;VQSLOD=1.3736;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,1459	1/1:1,0:1:3.01:39,3,0	0/1:54,0:19:5.11:5,0,131	0/1:42,0:22:16.66:17,0,177	0/0:19,0:19:57.10:0,57,632	0/0:20,0:20:57.03:0,57,646	0/0:18,0:17:45.10:0,45,507	1/1:21,0:22:62.97:729,63,0	0/0:14,0:14:42.10:0,42,489	0/0:13,0:12:33.08:0,33,379	0/0:7,0:7:12.17:0,12,177	0/0:12,0:12:35.95:0,36,368	0/0:15,0:15:42.03:0,42,460	0/0:9,0:9:24.06:0,24,279	0/0:16,0:16:45.10:0,45,516	0/0:17,0:17:48.12:0,48,572	0/0:46,0:45:99:0,129,1419	0/0:28,0:28:78.17:0,78,905	1/1:28,0:27:69.16:831,69,0	1/1:16,0:16:46.32:548,46,0	1/1:13,0:12:24.01:291,24,0	0/0:6,0:6:18.06:0,18,221	0/0:10,0:9:27.07:0,27,320	0/0:30,0:31:90.24:0,90,1068	0/0:7,0:7:18.04:0,18,209	0/0:30,0:30:90.23:0,90,1052	1/1:1,17:17:6.02:79,6,0	0/0:14,0:14:42.08:0,42,463
chr10	106274823	.	T	TG	1127.16	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-2.450;DP=443;FS=0.570;HRun=2;HaplotypeScore=70.2856;InbreedingCoeff=0.7802;MQ=68.38;MQ0=45;MQRankSum=0.223;QD=11.62;ReadPosRankSum=-2.519;VQSLOD=1.1112;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:30:56.21:0,56,391	1/1:7,0:6:11.82:83,12,0	0/0:37,0:12:14.74:0,15,122	0/0:36,0:15:1.46:0,1,84	0/0:21,0:20:2.47:0,2,150	0/0:10,0:10:23.12:0,23,176	0/0:9,0:7:19.02:0,19,132	1/1:26,0:25:51:412,51,0	0/0:9,0:6:12:0,12,102	0/0:15,0:13:19.35:0,19,147	0/0:12,0:12:1.78:0,2,92	0/0:8,0:6:11.82:0,12,93	0/0:14,0:14:15.48:0,15,132	0/0:9,0:9:20.81:0,21,161	0/0:7,0:7:17.97:0,18,146	0/0:3,0:3:8.99:0,9,75	0/0:18,0:16:25.23:0,25,169	0/0:25,0:24:57.07:0,57,398	1/1:15,0:10:21.71:166,22,0	1/1:4,9:11:26.63:206,27,0	1/1:10,0:9:14.88:115,15,0	0/1:8,0:8:1.31:1,0,68	0/0:9,0:8:13.97:0,14,97	0/0:11,0:11:16.57:0,17,118	0/0:13,0:12:16.29:0,16,100	0/0:20,0:16:14.48:0,14,119	1/1:18,0:17:38.93:323,39,0	0/0:26,0:22:52.87:0,53,393
chr10	106276329	.	G	GA	1393.81	PASS	AB=0.655;AC=11;AF=0.196;AN=56;BaseQRankSum=-5.584;DP=574;FS=1.045;HRun=12;HaplotypeScore=69.4759;InbreedingCoeff=0.6206;MQ=69.71;MQ0=0;MQRankSum=1.479;QD=10.64;ReadPosRankSum=-2.816;VQSLOD=2.5220;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:32:74:0,74,520	0/1:3,8:11:2.94:129,0,3	0/0:18,0:12:17.09:0,17,75	0/0:11,0:8:7.51:0,8,47	0/0:19,2:22:8.36:0,8,247	0/0:19,0:19:41.69:0,42,306	0/0:22,1:23:18.40:0,18,294	1/1:6,17:23:38.97:356,39,0	0/0:16,1:17:0.59:0,1,168	0/0:15,1:18:1.71:0,2,157	0/0:17,0:20:29.90:0,30,193	0/1:10,3:13:2.36:2,0,148	0/0:14,0:14:32.74:0,33,240	0/0:15,0:16:28.81:0,29,203	0/0:14,0:16:39.86:0,40,274	0/0:25,0:25:65.62:0,66,481	0/0:28,0:30:35.48:0,35,414	0/0:23,0:25:69.70:0,70,493	1/1:9,9:19:26.55:230,27,0	1/1:5,17:22:26.17:416,26,0	0/1:6,17:23:13.77:204,0,14	0/0:19,0:23:28.01:0,28,305	0/0:19,0:21:39.81:0,40,274	0/0:20,0:21:58.71:0,59,422	0/0:15,0:15:32.78:0,33,241	0/0:30,1:33:66.61:0,67,471	1/1:8,10:20:7.92:218,8,0	0/0:22,1:23:24.48:0,24,343
chr10	106276812	.	CTG	C	402.60	PASS	AB=0.923;AC=12;AF=0.214;AN=56;BaseQRankSum=4.448;DP=665;FS=0.763;HRun=0;HaplotypeScore=104.0420;InbreedingCoeff=-0.0339;MQ=71.91;MQ0=6;MQRankSum=2.112;QD=1.66;ReadPosRankSum=0.843;VQSLOD=1.6851;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,13:36:27:283,27,0	0/0:2,0:9:5.94:0,6,46	0/0:30,0:24:3.01:0,3,38	0/0:27,0:18:3.01:0,3,36	0/1:19,1:21:49.23:49,0,232	0/0:18,0:21:33.08:0,33,431	0/1:21,1:22:3.08:3,0,347	0/0:34,0:33:26.90:0,27,243	0/1:17,4:21:36.25:36,0,309	0/0:33,0:33:8.96:0,9,516	0/0:21,0:21:21.05:0,21,295	0/0:17,0:17:29.96:0,30,380	0/0:23,0:26:36.04:0,36,454	0/0:24,0:23:44.85:0,45,534	0/0:27,0:27:45.08:0,45,589	0/1:18,3:21:66.42:66,0,284	0/0:19,0:19:21.04:0,21,274	0/1:17,3:19:35.01:35,0,307	0/0:30,0:29:14.92:0,15,129	0/0:26,0:26:5.96:0,6,50	0/1:26,0:26:0.01:0,0,1	0/0:26,0:26:39.06:0,39,501	0/1:19,2:21:24.24:24,0,436	0/0:33,0:33:45.13:0,45,639	0/1:19,1:20:20.59:21,0,350	0/1:25,0:25:12.06:12,0,211	0/0:7,0:18:11.61:0,12,92	0/1:9,1:10:18.15:18,0,144
chr10	106277053	.	G	GGT	6137.15	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-14.812;DP=706;FS=5.795;HRun=0;HaplotypeScore=78.7132;InbreedingCoeff=0.9974;MQ=86.68;MQ0=0;MQRankSum=-2.672;QD=39.09;ReadPosRankSum=-1.909;VQSLOD=5.8081;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1319	1/1:1,7:8:18.06:304,18,0	0/0:26,0:26:58.69:0,59,716	0/0:22,0:22:45.14:0,45,574	0/0:19,0:19:51.16:0,51,656	0/0:23,0:24:72.06:0,72,902	0/0:26,0:26:29.10:0,29,862	1/1:11,28:39:65.93:1392,66,0	0/0:36,0:36:96.31:0,96,1235	0/0:23,0:23:60.19:0,60,762	0/0:21,0:21:51.17:0,51,656	0/0:28,0:28:72.23:0,72,923	0/0:31,0:31:84.24:0,84,1063	0/0:31,0:31:87.27:0,87,1104	0/0:31,0:31:87.28:0,87,1120	0/0:31,0:31:90.29:0,90,1156	0/0:24,0:24:72.23:0,72,926	0/0:23,0:23:57.11:0,57,684	1/1:2,22:24:66.23:1109,66,0	1/1:2,20:22:51.17:854,51,0	1/1:10,36:46:99:1721,102,0	0/0:24,0:24:66.21:0,66,849	0/0:15,0:15:42.14:0,42,541	0/0:28,0:28:72.19:0,72,907	0/0:22,0:22:60.20:0,60,772	0/0:21,0:21:51.06:0,51,609	1/1:3,15:18:45.15:758,45,0	0/0:7,0:7:21.07:0,21,270
chr10	106277292	.	T	TA	64.07	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.170;DP=577;FS=1.008;HRun=11;HaplotypeScore=68.5199;InbreedingCoeff=0.7170;MQ=75.51;MQ0=3;MQRankSum=1.154;QD=10.68;ReadPosRankSum=1.903;VQSLOD=3.1290;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:25:14.02:0,14,283	1/1:1,5:6:15.03:152,15,0	0/0:25,0:17:17.62:0,18,123	0/0:21,0:18:18:0,18,118	0/0:24,0:26:28.26:0,28,385	0/0:17,0:17:34.64:0,35,255	0/0:12,0:12:31.92:0,32,238	0/0:29,0:29:37:0,37,418	0/0:16,0:17:43.87:0,44,331	0/0:22,1:24:22.38:0,22,347	0/0:30,0:30:53.52:0,54,415	0/0:15,0:15:35.83:0,36,278	0/0:12,1:13:2.43:0,2,202	0/0:14,0:14:29.73:0,30,222	0/0:32,0:32:62.64:0,63,485	0/0:19,0:19:50.79:0,51,395	0/0:29,2:30:13.76:0,14,465	0/0:23,0:23:59.70:0,60,457	0/0:28,0:28:67.88:0,68,508	0/0:17,0:18:49.83:0,50,372	0/0:6,0:6:11.17:0,11,77	0/0:21,1:22:8.38:0,8,248	0/0:16,0:17:40.88:0,41,307	0/0:11,0:11:29.87:0,30,230	0/0:16,0:16:26.83:0,27,209	0/0:30,1:32:43.08:0,43,492	0/0:27,0:28:67.72:0,68,516	0/0:19,0:19:43.70:0,44,330
chr10	106277937	.	GA	G	1760.14	PASS	AB=0.855;AC=18;AF=0.333;AN=54;BaseQRankSum=12.442;DP=648;FS=119.597;HRun=2;HaplotypeScore=150.8117;InbreedingCoeff=-0.4841;MQ=36.25;MQ0=32;MQRankSum=-10.332;QD=3.64;ReadPosRankSum=-0.381;VQSLOD=-0.5006;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,3:29:50.34:50,0,860	0/0:15,0:15:27.07:0,27,382	./.	0/0:7,1:2:6.02:0,6,90	0/0:16,1:16:21.07:0,21,314	0/1:15,9:24:99:259,0,264	0/1:25,1:23:66.73:67,0,446	0/1:31,3:19:3.33:3,0,388	0/1:23,5:29:99:157,0,452	0/1:22,3:27:99:130,0,404	0/1:23,4:27:99:144,0,413	0/1:23,4:27:87.66:88,0,715	0/1:18,3:17:94.95:95,0,327	0/1:19,9:27:99:176,0,444	0/1:27,5:30:95.72:96,0,589	0/1:29,6:35:99:221,0,820	0/0:11,1:13:27.06:0,27,380	0/1:13,2:12:5.74:6,0,372	0/0:15,0:11:30.06:0,30,404	0/0:21,0:21:38.34:0,38,534	0/0:29,0:28:71.19:0,71,1014	0/1:24,4:27:99:138,0,456	0/1:18,3:20:72.20:72,0,387	0/0:14,0:11:15.05:0,15,224	0/1:17,1:18:22.17:22,0,575	0/1:29,5:31:99:179,0,733	0/0:28,0:27:62.91:0,63,808	0/1:13,1:14:9.73:10,0,335
chr10	106278438	.	GAGA	G	2113.81	PASS	AB=0.786;AC=33;AF=0.868;AN=38;BaseQRankSum=-1.543;DP=217;FS=41.130;HRun=0;HaplotypeScore=35.3038;InbreedingCoeff=0.4439;MQ=37.65;MQ0=145;MQRankSum=-1.325;QD=15.43;ReadPosRankSum=1.605;VQSLOD=1.4912;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,5:5:6.02:111,6,0	1/1:2,3:3:9.03:167,9,0	0/0:15,0:3:9.03:0,9,202	0/0:21,0:4:9.03:0,9,187	./.	./.	./.	1/1:5,3:3:9.03:165,9,0	1/1:5,3:3:9.03:167,9,0	1/1:7,1:1:3.01:56,3,0	./.	./.	1/1:3,2:2:6.02:110,6,0	1/1:3,1:1:3.01:54,3,0	1/1:4,2:2:6.02:111,6,0	1/1:4,2:2:6.02:111,6,0	1/1:5,6:5:15.01:241,15,0	1/1:5,4:4:9.03:168,9,0	1/1:5,3:2:6.02:112,6,0	1/1:4,1:1:3.01:56,3,0	./.	./.	./.	0/1:8,3:3:0:0,0,0	./.	1/1:6,2:2:6.02:112,6,0	1/1:8,9:9:21.07:350,21,0	1/1:0,3:3:8.99:131,9,0
chr10	106278617	.	TA	T	720.50	PASS	AB=0.863;AC=15;AF=0.268;AN=56;BaseQRankSum=4.591;DP=410;FS=0.565;HRun=15;HaplotypeScore=44.2932;InbreedingCoeff=0.6344;MQ=59.20;MQ0=5;MQRankSum=0.179;QD=5.91;ReadPosRankSum=1.364;VQSLOD=1.8802;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:38:78.16:0,78,645	1/1:1,6:8:16.79:102,17,0	0/0:11,0:5:0:0,0,0	0/0:9,0:7:6.74:0,7,38	0/0:13,1:14:7.67:0,8,179	0/0:8,0:8:8.99:0,9,76	0/0:11,0:13:23.78:0,24,188	1/1:12,14:26:46.17:289,46,0	0/0:11,0:10:17.98:0,18,153	0/0:11,0:13:20.66:0,21,156	0/0:9,0:9:14.95:0,15,122	0/1:10,2:12:17.54:18,0,107	0/0:10,0:11:14.66:0,15,100	0/0:13,0:12:14.94:0,15,119	0/1:10,2:14:12.52:13,0,167	0/0:15,1:16:19.70:0,20,288	0/0:25,0:26:56.73:0,57,466	0/0:29,0:29:56.99:0,57,501	1/1:5,4:8:8.82:58,9,0	1/1:7,4:10:14.67:91,15,0	1/1:1,5:6:8.86:58,9,0	0/0:6,0:6:9:0,9,79	0/0:11,0:11:23.99:0,24,208	0/1:9,1:9:4.28:4,0,88	0/0:12,2:13:4.74:0,5,165	0/0:20,0:25:43.78:0,44,344	1/1:12,14:26:41.13:269,41,0	0/0:8,0:10:17.81:0,18,141
chr10	106278954	.	CG	C	625.12	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=7.832;DP=468;FS=2.935;HRun=3;HaplotypeScore=51.6815;InbreedingCoeff=0.7488;MQ=54.87;MQ0=23;MQRankSum=-5.177;QD=16.45;ReadPosRankSum=-0.524;VQSLOD=2.9020;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.27:0,81,1161	0/0:6,0:6:18.06:0,18,249	0/0:2,0:2:1.55:0,2,4	0/0:6,0:4:12.02:0,12,152	0/0:17,0:16:39.11:0,39,525	1/1:1,12:11:24.08:297,24,0	1/1:1,15:15:36.11:446,36,0	0/0:36,0:17:48.16:0,48,687	0/0:19,0:19:57.19:0,57,815	0/0:19,0:19:54.17:0,54,760	0/0:9,0:9:24.08:0,24,345	0/0:18,0:18:51.15:0,51,700	0/0:13,0:13:36.08:0,36,463	0/0:18,0:18:54.17:0,54,761	0/1:9,0:9:7.87:8,0,300	0/0:12,0:12:36.11:0,36,500	0/0:32,0:32:93.31:0,93,1336	0/0:19,1:20:54.18:0,54,771	0/0:15,0:15:45.15:0,45,640	0/0:16,0:15:42.14:0,42,604	0/0:24,0:24:72.24:0,72,1034	0/0:14,0:14:39.13:0,39,559	0/0:10,0:10:30.10:0,30,424	0/0:23,1:24:35.13:0,35,938	0/0:11,0:11:27.08:0,27,371	0/0:19,0:18:48.15:0,48,674	0/0:20,0:19:54.15:0,54,724	0/0:23,0:22:63.21:0,63,906
chr10	106280949	.	CT	C	3754.71	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.854;DP=548;FS=0.878;HRun=1;HaplotypeScore=54.9042;InbreedingCoeff=0.9916;MQ=97.81;MQ0=0;MQRankSum=-1.651;QD=35.76;ReadPosRankSum=-1.522;VQSLOD=3.0706;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.31:0,96,1499	0/0:4,0:4:12.04:0,12,192	0/0:32,0:32:96.31:0,96,1497	0/0:22,0:22:60.18:0,60,930	0/0:19,0:19:48.15:0,48,733	0/0:20,0:20:54.18:0,54,858	0/0:29,0:29:87.28:0,87,1368	1/1:0,30:30:81.25:1112,81,0	0/0:15,0:15:45.14:0,45,695	0/0:18,0:18:51.17:0,51,795	0/0:13,0:13:33.08:0,33,478	0/0:24,0:24:72.25:0,72,1151	0/0:20,0:20:60.20:0,60,950	0/0:12,0:12:36.12:0,36,571	0/0:17,0:17:51.17:0,51,811	0/0:16,0:16:48.16:0,48,764	0/0:36,0:36:99:0,108,1720	0/0:29,0:29:84.29:0,84,1343	1/1:0,11:11:30.10:420,30,0	1/1:0,13:13:33.11:461,33,0	1/1:0,30:30:66.22:923,66,0	0/0:16,0:16:48.16:0,48,767	0/0:9,0:9:21.07:0,21,328	0/0:18,0:18:52.41:0,52,795	0/0:13,0:13:39.13:0,39,623	0/0:14,0:14:39.12:0,39,601	1/1:0,21:21:60.20:839,60,0	0/0:13,0:13:39.13:0,39,623
chr10	106282823	.	TAG	T	302.97	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.315;DP=609;FS=15.708;HRun=0;HaplotypeScore=70.3378;InbreedingCoeff=0.9833;MQ=91.50;MQ0=0;MQRankSum=-0.587;QD=30.30;ReadPosRankSum=-0.168;VQSLOD=4.2603;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.27:0,90,1608	1/1:0,10:10:27.09:397,27,0	0/0:20,0:20:57.17:0,57,1018	0/0:29,0:29:74.43:0,74,1430	0/0:23,0:23:66.23:0,66,1218	0/0:28,0:28:84.27:0,84,1534	0/0:18,0:18:54.19:0,54,1003	0/0:31,0:31:87.30:0,87,1613	0/0:15,0:15:42.14:0,42,786	0/0:25,0:25:75.26:0,75,1405	0/0:23,0:23:69.24:0,69,1291	0/0:19,0:19:57.15:0,57,972	0/0:20,0:20:60.21:0,60,1109	0/0:17,0:17:51.17:0,51,954	0/0:22,0:22:60.21:0,60,1094	0/0:20,0:20:60.21:0,60,1123	0/0:33,0:33:93.30:0,93,1708	0/0:26,0:26:78.23:0,78,1414	0/0:24,0:24:69.23:0,69,1255	0/0:22,0:22:59.86:0,60,1038	0/0:31,0:31:90.29:0,90,1652	0/0:18,0:18:51.14:0,51,884	0/0:22,0:22:66.21:0,66,1202	0/0:15,0:15:45.13:0,45,801	0/0:20,0:20:60.21:0,60,1123	0/0:24,0:24:69.24:0,69,1265	0/0:16,0:16:48.16:0,48,898	0/0:5,0:5:15.02:0,15,231
chr10	106287712	.	G	GGT	564.76	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.363;DP=767;FS=4.142;HRun=0;HaplotypeScore=89.0089;InbreedingCoeff=0.9993;MQ=87.39;MQ0=0;MQRankSum=-2.507;QD=37.65;ReadPosRankSum=1.394;VQSLOD=5.5040;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,1913	1/1:1,14:15:36.12:660,36,0	0/0:28,0:28:68.45:0,68,961	0/0:25,0:25:57.19:0,57,809	0/0:22,0:22:63.19:0,63,883	0/0:30,0:30:81.26:0,81,1142	0/0:30,0:30:84.28:0,84,1202	0/0:29,0:29:78.26:0,78,1118	0/0:24,0:24:72.24:0,72,1031	0/0:25,0:25:72.24:0,72,1023	0/0:14,0:14:42.14:0,42,602	0/0:21,0:21:60.18:0,60,841	0/0:37,0:37:99:0,108,1548	0/0:39,0:39:99:0,114,1616	0/0:37,0:37:99:0,105,1487	0/0:26,0:26:75.21:0,75,1021	0/0:33,0:33:93.31:0,93,1329	0/0:25,0:25:69.23:0,69,982	0/0:20,0:20:51.15:0,51,710	0/0:10,0:10:30.10:0,30,430	0/0:65,0:65:99:0,193,2690	0/0:17,0:17:45.15:0,45,642	0/0:16,0:16:45.15:0,45,644	0/0:49,0:49:99:0,144,2063	0/0:24,0:24:66.21:0,66,927	0/0:24,0:24:63.21:0,63,902	0/0:18,0:18:54.18:0,54,772	0/0:18,0:18:54.18:0,54,774
chr10	106291188	.	C	CG	201.56	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.116;DP=655;FS=3.464;HRun=3;HaplotypeScore=64.3319;InbreedingCoeff=0.9661;MQ=83.48;MQ0=0;MQRankSum=-1.600;QD=22.40;ReadPosRankSum=0.545;VQSLOD=3.0567;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.29:0,96,1152	1/1:2,7:9:21.07:294,21,0	0/0:20,0:20:57.17:0,57,674	0/0:18,0:18:46.59:0,47,498	0/0:22,0:22:63.19:0,63,755	0/0:15,0:15:36.11:0,36,432	0/0:28,0:28:78.18:0,78,897	0/0:23,0:23:63.18:0,63,746	0/0:30,0:30:90.28:0,90,1079	0/0:21,0:21:54.16:0,54,648	0/0:19,0:19:54.17:0,54,646	0/0:25,0:25:72.21:0,72,852	0/0:22,0:22:48.10:0,48,559	0/0:32,0:32:90.24:0,90,1079	0/0:25,0:25:72.22:0,72,864	0/0:18,0:18:51.16:0,51,612	0/0:40,0:40:99:0,111,1314	0/0:24,0:24:69.21:0,69,828	0/0:18,0:18:51.15:0,51,601	0/0:16,0:16:45.14:0,45,540	0/0:59,0:59:99:0,159,1907	0/0:18,0:18:48.13:0,48,564	0/0:16,0:16:45.14:0,45,539	0/0:34,0:34:96.29:0,96,1150	0/0:19,0:19:57.17:0,57,684	0/0:30,0:30:87.27:0,87,1043	0/0:17,0:17:45.14:0,45,539	0/0:4,0:4:12.04:0,12,144
chr10	106293519	.	T	TCACA	125.89	PASS	AB=0.917;AC=5;AF=0.089;AN=56;BaseQRankSum=5.822;DP=548;FS=1.029;HRun=0;HaplotypeScore=119.1203;InbreedingCoeff=0.4016;MQ=56.35;MQ0=12;MQRankSum=-5.010;QD=1.61;ReadPosRankSum=-3.439;VQSLOD=1.4732;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:68.88:0,69,1121	0/0:2,0:3:3:0,3,28	0/0:38,0:15:25.69:0,26,477	0/0:37,0:19:53.16:0,53,759	0/0:17,0:17:44.99:0,45,623	0/0:21,0:21:42.11:0,42,662	0/0:22,0:22:60.17:0,60,943	1/1:24,0:23:13.98:83,14,0	0/0:17,0:17:45.15:0,45,733	0/0:19,0:19:53.92:0,54,816	0/0:10,0:10:24.08:0,24,407	0/0:16,0:16:42.12:0,42,650	0/0:11,0:11:21.04:0,21,286	0/0:19,0:19:45.14:0,45,722	0/0:25,0:25:69.21:0,69,1100	0/1:10,5:15:99:142,0,303	0/0:27,0:27:75.23:0,75,1216	0/0:20,0:20:51.07:0,51,745	0/0:17,0:17:0.50:0,1,113	0/0:8,0:13:11.98:0,12,99	0/1:16,0:16:0.02:0,0,0	0/0:22,0:21:51.16:0,51,807	0/0:15,0:15:36.11:0,36,566	0/0:34,0:34:96.31:0,96,1587	0/0:13,0:13:33.11:0,33,555	0/0:18,0:18:54.16:0,54,811	0/1:23,0:22:4.74:5,0,170	0/0:5,0:5:15.05:0,15,258
chr10	106293520	.	CACA	C	405.94	PASS	AB=0.978;AC=9;AF=0.161;AN=56;BaseQRankSum=8.597;DP=529;FS=4.575;HRun=0;HaplotypeScore=96.1379;InbreedingCoeff=0.6043;MQ=56.80;MQ0=14;MQRankSum=-5.500;QD=3.98;ReadPosRankSum=0.613;VQSLOD=1.3928;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.24:0,81,1763	1/1:3,0:3:2.98:21,3,0	0/1:36,0:15:1.32:1,0,719	0/0:37,0:19:57.15:0,57,1119	0/0:17,0:17:48.16:0,48,1004	0/0:21,0:21:44.69:0,45,986	0/0:22,0:22:60.21:0,60,1333	0/1:12,0:11:4.33:4,0,26	0/0:17,0:17:45.15:0,45,1007	0/0:20,0:19:57.19:0,57,1188	0/0:10,0:10:30.09:0,30,593	0/0:16,0:16:42.04:0,42,877	0/0:10,0:10:24.06:0,24,478	0/0:19,0:19:45.11:0,45,999	0/0:25,0:25:69.23:0,69,1521	0/0:15,0:15:39.13:0,39,793	0/0:27,0:27:75.26:0,75,1656	0/0:21,0:21:51.29:0,51,1180	0/1:13,1:14:9.17:163,0,9	1/1:10,3:13:11.93:102,12,0	0/0:10,3:13:0.47:0,0,1	0/0:22,0:21:57.20:0,57,1269	0/0:14,0:14:39.13:0,39,835	0/0:34,0:34:99:0,99,2208	0/0:13,0:13:39.13:0,39,889	0/0:18,0:18:54.17:0,54,1089	1/1:18,4:21:17.81:250,18,0	0/0:5,0:5:15.05:0,15,369
chr10	106293522	.	CA	C	297.17	PASS	AB=0.875;AC=8;AF=0.143;AN=56;BaseQRankSum=9.458;DP=528;FS=3.527;HRun=1;HaplotypeScore=81.1431;InbreedingCoeff=0.5937;MQ=55.56;MQ0=15;MQRankSum=-5.220;QD=4.87;ReadPosRankSum=1.533;VQSLOD=0.7035;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:73.99:0,74,1184	1/1:3,0:3:2.22:7,2,0	0/0:36,1:14:14.76:0,15,521	0/0:36,0:19:56.50:0,56,820	0/0:17,0:17:48.03:0,48,677	0/0:20,0:20:41.69:0,42,662	0/0:23,0:23:63.21:0,63,981	0/1:12,0:11:23.82:24,0,30	0/0:17,0:17:45.13:0,45,689	0/0:20,0:19:57.01:0,57,826	0/0:11,0:11:32.70:0,33,414	0/0:16,0:16:41.92:0,42,596	0/0:7,0:10:15.85:0,16,283	0/0:19,0:19:42.10:0,42,656	0/0:25,0:25:65.63:0,66,1036	0/0:14,0:14:36.01:0,36,508	0/0:28,0:28:75.11:0,75,1123	0/0:20,0:21:56.67:0,57,853	0/1:8,4:12:37.05:127,0,37	1/1:8,5:13:11.85:80,12,0	0/0:11,2:13:0.94:0,1,1	0/0:23,0:22:60.16:0,60,906	0/0:14,0:14:39.09:0,39,579	0/0:35,0:35:99:0,99,1509	0/0:12,0:12:36.12:0,36,575	0/0:18,0:18:52:0,52,718	1/1:12,9:20:11.11:193,11,0	0/0:5,0:5:15.05:0,15,240
chr10	106293524	.	TA	T	237.79	PASS	AB=0.853;AC=8;AF=0.143;AN=56;BaseQRankSum=9.393;DP=535;FS=6.227;HRun=1;HaplotypeScore=82.8896;InbreedingCoeff=0.5928;MQ=55.26;MQ0=17;MQRankSum=-5.496;QD=2.73;ReadPosRankSum=2.053;VQSLOD=-0.3361;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:73.87:0,74,1077	1/1:3,0:3:2.22:7,2,0	0/1:38,0:13:1.02:1,0,387	0/0:37,0:19:56.93:0,57,690	0/0:14,0:16:44.48:0,44,582	0/0:20,0:20:41.66:0,42,598	0/0:20,0:23:62.68:0,63,842	0/0:11,0:10:1.21:0,1,35	0/0:17,0:17:45.13:0,45,647	0/0:21,0:20:57.39:0,57,751	0/0:11,0:11:32.22:0,32,401	0/0:15,0:16:41.29:0,41,551	0/0:11,0:11:18.82:0,19,270	0/0:20,0:20:44.54:0,45,605	0/0:23,0:24:62.11:0,62,868	0/0:14,0:14:36.05:0,36,443	0/0:26,0:28:74.03:0,74,1011	0/0:21,0:21:53.71:0,54,747	0/1:7,5:12:38.04:121,0,38	1/1:5,6:13:11.07:63,11,0	0/0:9,3:13:0.94:0,1,1	0/0:22,0:21:57.18:0,57,815	0/0:14,0:16:40.89:0,41,509	0/0:34,0:34:96.27:0,96,1381	0/0:13,0:13:39.12:0,39,565	0/0:17,0:21:56.17:0,56,646	1/1:8,12:20:9.47:169,9,0	0/0:6,0:6:18.04:0,18,262
chr10	106293698	.	AG	A	1058.11	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.311;DP=533;FS=33.871;HRun=2;HaplotypeScore=70.2706;InbreedingCoeff=0.8912;MQ=65.07;MQ0=7;MQRankSum=-0.133;QD=11.89;ReadPosRankSum=-4.150;VQSLOD=-0.4320;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:6.96:0,7,536	0/0:11,0:11:27.69:0,28,153	0/0:47,0:13:33.01:0,33,243	0/0:35,0:16:15.42:0,15,120	0/0:24,0:23:43.49:0,43,429	0/0:24,0:24:62.36:0,62,578	0/0:15,0:15:15.82:0,16,303	1/1:16,4:21:46.29:343,46,0	0/0:8,0:8:22.04:0,22,160	0/0:21,0:21:50.78:0,51,524	0/0:23,0:23:43.25:0,43,480	0/0:13,0:14:10.87:0,11,220	0/0:11,0:11:21.24:0,21,234	0/0:10,0:10:10.59:0,11,206	0/0:18,0:18:29.20:0,29,301	0/0:12,0:12:18.66:0,19,279	0/0:23,0:23:45.88:0,46,456	0/0:14,0:14:13.27:0,13,201	1/1:13,0:23:62.08:493,62,0	1/1:1,17:18:37.86:237,38,0	1/1:2,0:5:5.46:25,5,0	0/0:12,0:12:6.47:0,6,200	0/0:18,0:18:38.47:0,38,449	0/0:10,0:10:19.77:0,20,200	0/0:25,0:24:15.36:0,15,429	0/0:20,0:20:33.62:0,34,423	1/1:3,19:21:15.83:127,16,0	0/0:13,0:13:31.80:0,32,255
chr10	106295291	.	T	TA	2467.10	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-2.601;DP=785;FS=9.653;HRun=11;HaplotypeScore=85.2956;InbreedingCoeff=0.8501;MQ=69.79;MQ0=1;MQRankSum=-2.249;QD=15.52;ReadPosRankSum=-2.121;VQSLOD=2.9105;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:55:99:0,137,1037	0/0:13,0:14:31.88:0,32,235	0/1:27,0:24:53.76:54,0,127	0/0:16,0:14:2.94:0,3,58	0/0:30,1:32:26.69:0,27,489	0/0:18,1:20:22.36:0,22,341	0/0:29,0:30:70.72:0,71,536	1/1:9,21:31:59.86:559,60,0	0/0:27,1:28:31.48:0,31,415	0/0:33,1:34:53.18:0,53,591	0/0:22,0:22:56.75:0,57,438	0/0:34,0:36:90.69:0,91,680	0/0:32,0:32:77.58:0,78,592	0/0:28,0:28:77.70:0,78,603	0/0:34,1:35:52.45:0,52,580	0/0:30,0:30:80.62:0,81,620	0/0:34,0:34:86.54:0,87,663	0/0:24,0:24:53.72:0,54,408	1/1:11,15:26:47.99:457,48,0	1/1:12,18:31:62.92:606,63,0	1/1:5,12:17:27.94:276,28,0	0/0:31,1:32:50.21:0,50,573	0/0:22,1:23:23.23:0,23,353	0/0:35,1:36:68.08:0,68,700	0/0:23,0:24:58.79:0,59,447	0/0:26,0:26:76.67:0,77,579	1/1:6,19:26:71.92:693,72,0	0/0:14,0:14:23.87:0,24,186
chr10	106295362	.	A	AATCCTACTCCACTCG	22669.07	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-1.164;DP=817;FS=3.556;HRun=0;HaplotypeScore=322.8518;InbreedingCoeff=0.9983;MQ=83.95;MQ0=0;MQRankSum=-14.812;QD=142.57;ReadPosRankSum=-2.761;VQSLOD=3.8159;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,163,6796	1/1:3,5:11:18.06:1313,18,0	0/0:34,0:34:78.75:0,79,3024	0/0:23,0:23:60.64:0,61,1855	0/0:22,0:22:66.23:0,66,2614	0/0:23,0:23:66.23:0,66,2767	0/0:30,0:30:87.28:0,87,3598	1/1:42,0:42:99:6004,114,0	0/0:28,0:28:81.28:0,81,3612	0/0:38,0:38:99:0,105,4424	0/0:27,0:27:75.26:0,75,3254	0/0:32,0:32:93.31:0,93,4031	0/0:31,0:31:87.28:0,87,3557	0/0:19,0:19:54.19:0,54,2382	0/0:46,0:46:99:0,138,5744	0/0:31,0:31:90.31:0,90,3951	0/0:36,0:36:99:0,105,4534	0/0:30,0:30:78.27:0,78,3251	1/1:20,5:25:75.24:3420,75,0	1/1:11,17:31:69.24:4727,69,0	1/1:16,4:20:33.11:2269,33,0	0/0:35,0:35:99:0,102,4416	0/0:13,0:13:39.13:0,39,1666	0/0:32,0:32:93.29:0,93,3671	0/0:18,0:18:51.17:0,51,2200	0/0:30,0:30:90.31:0,90,3896	1/1:12,16:30:77.95:4936,78,0	0/0:24,0:24:63.18:0,63,2603
chr10	106295597	.	G	GA	12764.95	PASS	AB=0.917;AC=52;AF=0.963;AN=54;BaseQRankSum=2.706;DP=747;FS=1.071;HRun=1;HaplotypeScore=132.5792;InbreedingCoeff=-0.0385;MQ=87.01;MQ0=0;MQRankSum=-4.309;QD=17.09;ReadPosRankSum=6.319;VQSLOD=5.1945;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:47,0:47:99:896,128,0	1/1:10,0:10:26.73:203,27,0	0/1:29,0:29:15.90:188,0,16	0/1:15,4:20:64.17:229,0,64	1/1:16,0:16:22.57:268,23,0	1/1:21,0:21:59.26:405,59,0	1/1:31,0:31:88.72:577,89,0	1/1:28,0:28:79.14:473,79,0	1/1:31,0:31:76.81:510,77,0	1/1:27,0:27:19.85:336,20,0	1/1:17,0:17:21.49:266,21,0	1/1:36,0:36:99:698,106,0	1/1:36,0:36:91.76:611,92,0	1/1:30,0:30:85.88:575,86,0	1/1:38,0:38:91.72:626,92,0	1/1:40,0:40:82.56:660,83,0	1/1:33,0:33:88.86:587,89,0	1/1:27,0:27:73.97:486,74,0	1/1:21,0:21:58.44:391,58,0	1/1:21,0:21:58.22:420,58,0	1/1:47,0:47:99:735,112,0	1/1:22,0:22:62.20:419,62,0	1/1:9,0:9:26.68:182,27,0	1/1:34,0:34:97.64:639,98,0	1/1:21,0:21:59.13:389,59,0	1/1:28,0:28:51.08:419,51,0	1/1:27,0:27:80.31:577,80,0	./.
chr10	106297284	.	C	CA	919.03	PASS	AB=0.947;AC=17;AF=0.304;AN=56;BaseQRankSum=-3.155;DP=307;FS=7.700;HRun=11;HaplotypeScore=35.5975;InbreedingCoeff=0.5844;MQ=55.93;MQ0=8;MQRankSum=-1.850;QD=8.21;ReadPosRankSum=-1.970;VQSLOD=0.5640;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:9,1:10:6.55:7,0,139	1/1:0,5:5:12.02:122,12,0	0/0:19,0:7:12.76:0,13,86	0/1:13,0:3:2.64:17,0,3	0/0:15,0:15:35.85:0,36,279	0/0:9,0:11:25.91:0,26,186	0/0:14,0:14:32.84:0,33,255	1/1:8,12:21:15.68:326,16,0	0/1:7,1:8:9.51:10,0,118	0/1:14,1:15:0.58:1,0,179	0/0:15,0:15:38.84:0,39,302	0/0:6,0:6:11.95:0,12,93	0/0:5,0:5:8.95:0,9,70	0/0:4,0:4:11.95:0,12,93	0/0:6,0:6:11.91:0,12,90	0/0:10,0:10:20.89:0,21,162	0/0:21,0:20:44.80:0,45,348	0/0:10,0:11:31.86:0,32,231	1/1:3,9:14:29.22:250,29,0	1/1:2,7:10:23.84:216,24,0	1/1:2,0:2:2.99:23,3,0	0/1:6,0:6:4.67:5,0,76	0/0:10,0:10:26.89:0,27,209	0/0:2,0:2:2.99:0,3,23	0/0:17,0:16:33.95:0,34,257	0/0:16,1:17:14.36:0,14,294	1/1:5,2:6:12.02:122,12,0	0/0:10,0:11:24.99:0,25,174
chr10	106299313	.	A	AAGG	1450.26	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=4.304;DP=381;FS=0.962;HRun=0;HaplotypeScore=89.5591;InbreedingCoeff=0.5594;MQ=61.48;MQ0=5;MQRankSum=-3.501;QD=12.61;ReadPosRankSum=-4.389;VQSLOD=2.6262;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:27.04:0,27,334	0/0:6,0:5:12.01:0,12,174	0/0:25,0:16:7.33:0,7,175	0/0:15,0:11:14.76:0,15,239	0/0:10,0:10:1.94:0,2,156	0/1:16,0:16:38.36:38,0,331	0/0:11,0:11:2.76:0,3,346	1/1:25,2:22:11.78:255,12,0	0/0:17,0:17:21.07:0,21,564	0/0:17,0:17:40.20:0,40,597	0/0:4,0:4:12:0,12,150	0/1:11,0:11:0.40:0,0,300	0/0:8,0:8:21.01:0,21,263	0/1:11,0:11:13.85:14,0,260	0/0:7,0:7:21.07:0,21,305	0/0:14,0:14:32.49:0,32,417	0/0:33,0:33:47.62:0,48,826	0/0:16,0:16:42.13:0,42,588	1/1:11,3:14:27.37:384,27,0	1/1:3,3:6:9.03:184,9,0	1/1:7,11:18:12.04:246,12,0	0/0:12,0:12:32.98:0,33,415	0/0:6,0:6:2.41:0,2,184	0/0:14,0:14:32.97:0,33,368	0/0:8,0:8:3.42:0,3,204	0/0:24,0:24:55.64:0,56,739	1/1:3,9:12:25.64:497,26,0	0/0:2,0:2:6:0,6,67
chr10	106300426	.	A	AAAAGAAAG	1260.15	PASS	AB=0.727;AC=11;AF=0.212;AN=52;BaseQRankSum=1.791;DP=494;FS=13.330;HRun=0;HaplotypeScore=119.4260;InbreedingCoeff=0.7103;MQ=50.70;MQ0=5;MQRankSum=-3.752;QD=12.35;ReadPosRankSum=-1.675;VQSLOD=1.5092;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:83.35:0,83,2014	./.	0/0:16,0:7:3.01:0,3,34	./.	0/0:15,0:15:39.08:0,39,825	0/0:15,0:14:15.05:0,15,368	0/0:13,0:13:24.08:0,24,577	1/1:29,0:28:18.06:367,18,0	0/0:10,0:10:27.04:0,27,544	0/0:18,0:18:36.12:0,36,874	0/0:17,0:17:33.11:0,33,770	0/0:15,0:15:27.09:0,27,627	0/0:11,0:11:24.04:0,24,526	0/0:18,0:18:36.12:0,36,879	0/0:18,0:18:30.04:0,30,561	0/1:15,0:24:99:169,0,283	0/0:44,0:44:90.12:0,90,2025	0/0:22,0:20:30.10:0,30,685	1/1:6,4:7:12.04:433,12,0	1/1:6,0:9:3.01:74,3,0	1/1:6,4:13:3.01:123,3,0	0/0:8,0:8:9.03:0,9,219	0/0:13,0:13:27.03:0,27,530	0/0:29,0:31:53.41:0,53,1131	0/0:18,0:18:33.09:0,33,666	0/0:23,0:23:36.12:0,36,839	1/1:11,5:17:6.02:245,6,0	0/0:9,0:9:24.08:0,24,562
chr10	106300757	.	AGAG	A	58.86	PASS	AB=0.866;AC=2;AF=0.036;AN=56;BaseQRankSum=5.760;DP=696;FS=0.000;HRun=0;HaplotypeScore=105.8431;InbreedingCoeff=-0.0439;MQ=52.61;MQ0=22;MQRankSum=-4.114;QD=1.09;ReadPosRankSum=-2.956;VQSLOD=1.2760;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:38:95.37:0,95,1805	0/0:8,0:8:12.04:0,12,245	0/0:49,0:8:14.84:0,15,166	0/0:41,0:11:17.44:0,17,189	0/0:15,0:15:45.12:0,45,835	0/0:16,0:16:42.14:0,42,901	0/0:22,0:22:58.08:0,58,1138	0/0:41,0:37:36.19:0,36,1172	0/0:22,0:22:63.13:0,63,1174	0/0:26,0:25:63.18:0,63,1192	0/0:19,0:19:54.12:0,54,1031	0/0:22,0:22:63.18:0,63,1245	0/0:14,0:13:36.12:0,36,745	0/0:24,0:24:69.23:0,69,1422	0/0:23,0:23:60.13:0,60,1069	0/0:29,0:29:78.24:0,78,1630	0/0:32,0:32:81.66:0,82,1578	0/0:26,0:25:55.28:0,55,1251	0/0:18,1:17:39.08:0,39,644	0/0:15,1:16:4.90:0,5,525	0/1:34,1:33:49.70:50,0,727	0/0:12,0:12:30.09:0,30,571	0/0:20,0:20:54.17:0,54,1046	0/0:35,0:34:73.34:0,73,1638	0/0:14,0:14:36.11:0,36,716	0/0:36,0:34:99:0,99,1906	0/1:13,6:18:97.88:98,0,585	0/0:21,0:21:57.16:0,57,1105
chr10	106300790	.	G	GGAA	70.77	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=6.613;DP=645;FS=3.311;HRun=0;HaplotypeScore=113.0778;InbreedingCoeff=0.3597;MQ=54.56;MQ0=14;MQRankSum=-5.070;QD=1.47;ReadPosRankSum=-0.487;VQSLOD=2.2525;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:90.14:0,90,1242	1/1:1,3:6:8.69:137,9,0	0/0:28,0:6:14.96:0,15,162	0/0:24,0:10:13.26:0,13,207	0/0:23,0:23:63.18:0,63,882	0/0:15,0:15:39.10:0,39,545	0/0:31,0:31:58.19:0,58,967	0/0:39,0:33:28.22:0,28,504	0/0:23,0:23:57.07:0,57,691	0/0:23,0:23:54.17:0,54,779	0/0:19,0:19:57.15:0,57,780	0/0:26,0:26:69.14:0,69,912	0/0:18,0:18:48.16:0,48,722	0/0:24,0:24:66.13:0,66,904	0/0:25,0:25:69.17:0,69,936	0/0:28,0:28:84.19:0,84,1123	0/0:34,0:35:47.01:0,47,1020	0/0:21,0:20:43.53:0,44,705	0/1:19,0:14:1.17:1,0,172	0/1:7,0:7:13.89:28,0,14	0/0:37,0:36:31.51:0,32,476	0/0:10,0:10:27.08:0,27,388	0/0:12,0:12:36.10:0,36,504	0/0:36,0:35:85.42:0,85,1171	0/0:13,0:13:30.09:0,30,429	0/0:26,0:26:66.17:0,66,868	0/1:16,0:16:10.13:10,0,371	0/0:21,0:21:57.14:0,57,792
chr10	106300796	.	AGAAGAG	A	861.87	PASS	AB=0.900;AC=5;AF=0.089;AN=56;BaseQRankSum=8.089;DP=636;FS=5.298;HRun=0;HaplotypeScore=141.5651;InbreedingCoeff=-0.0960;MQ=54.33;MQ0=9;MQRankSum=-6.287;QD=7.37;ReadPosRankSum=-4.160;VQSLOD=0.1451;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,107,3120	0/0:6,0:6:12:0,12,152	0/0:24,0:8:23.92:0,24,347	0/0:24,0:11:30.88:0,31,569	0/0:22,0:22:66.17:0,66,2025	0/0:17,0:17:51.12:0,51,1356	0/0:31,0:31:93.24:0,93,2795	0/1:21,16:33:99:518,0,547	0/0:24,0:24:66.14:0,66,1799	0/0:21,0:21:60.20:0,60,1951	0/0:19,0:19:57.16:0,57,1716	0/0:27,0:27:75.22:0,75,2129	0/0:18,0:18:51.18:0,51,1774	0/0:22,0:22:66.21:0,66,2059	0/0:23,0:23:69.24:0,69,2242	0/0:28,0:28:84.26:0,84,2514	0/0:34,0:34:81.58:0,82,2708	0/0:20,0:19:59.83:0,60,1606	0/1:18,1:14:20.04:20,0,240	0/1:6,1:7:63.81:125,0,64	0/1:38,1:38:99:306,0,783	0/0:9,0:9:27.08:0,27,890	0/0:13,0:13:39.12:0,39,1198	0/0:40,0:39:99:0,111,3130	0/0:11,0:11:30.09:0,30,978	0/0:26,0:26:78.23:0,78,2071	0/1:15,0:15:7.43:7,0,707	0/0:20,0:20:60.10:0,60,1865
chr10	106300805	.	G	GGAA	635.84	PASS	AB=0.879;AC=7;AF=0.125;AN=56;BaseQRankSum=8.253;DP=651;FS=2.385;HRun=0;HaplotypeScore=114.6320;InbreedingCoeff=0.1277;MQ=56.21;MQ0=7;MQRankSum=-5.649;QD=4.78;ReadPosRankSum=-2.451;VQSLOD=1.5247;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:98.06:0,98,1667	1/1:7,0:7:3.79:38,4,0	0/0:23,0:12:33.08:0,33,412	0/0:23,0:13:11.14:0,11,337	0/0:24,0:24:72.21:0,72,1132	0/0:16,0:16:48.13:0,48,756	0/0:34,0:34:93.25:0,93,1528	0/1:43,1:39:99:272,0,435	0/0:24,0:24:66.15:0,66,991	0/0:22,0:22:66.21:0,66,1078	0/0:19,0:19:51.15:0,51,814	0/0:23,0:23:63.17:0,63,1014	0/0:20,0:20:60.17:0,60,961	0/0:23,0:23:63.20:0,63,1039	0/0:25,0:25:75.19:0,75,1167	0/0:26,0:26:78.21:0,78,1222	0/0:33,0:34:8.44:0,8,1331	0/0:20,0:20:13.36:0,13,848	0/1:16,1:13:41.97:42,0,177	0/1:3,3:6:7.95:135,0,8	0/1:39,4:42:99:162,0,404	0/0:9,0:9:27.08:0,27,434	0/0:13,0:13:39.12:0,39,634	0/0:38,0:38:99:0,102,1558	0/0:12,0:12:33.04:0,33,503	0/0:25,0:25:72.20:0,72,1098	0/1:14,2:16:99:114,0,352	0/0:23,0:23:69.24:0,69,1146
chr10	106302419	.	T	TTTTGTTTG	1013.41	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.609;DP=721;FS=0.000;HRun=0;HaplotypeScore=179.9554;InbreedingCoeff=0.8571;MQ=66.89;MQ0=4;MQRankSum=-3.783;QD=72.39;ReadPosRankSum=-2.488;VQSLOD=3.2417;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:84.28:0,84,2011	1/1:9,5:14:32.41:1108,32,0	0/0:29,0:21:15.05:0,15,344	0/0:19,0:15:9.03:0,9,200	0/0:29,0:29:42.14:0,42,1054	0/0:15,0:15:21.05:0,21,430	0/0:34,0:34:60.20:0,60,1406	0/0:30,0:30:24.08:0,24,604	0/0:15,0:15:24.08:0,24,606	0/0:27,0:27:48.16:0,48,1099	0/0:18,0:18:27.09:0,27,682	0/0:21,0:21:51.18:0,51,1262	0/0:20,0:20:27.05:0,27,574	0/0:31,0:31:63.22:0,63,1590	0/0:28,0:29:60.20:0,60,1383	0/0:27,0:27:47.27:0,47,1086	0/0:35,0:35:77.82:0,78,1831	0/0:20,0:20:27.09:0,27,682	0/0:17,0:17:8:0,8,143	0/0:21,0:21:39.12:0,39,919	0/0:61,0:61:99:0,108,2624	0/0:22,0:23:44.73:0,45,1065	0/0:22,0:22:57.18:0,57,1302	0/0:32,0:31:54.17:0,54,1304	0/0:24,0:24:36.10:0,36,823	0/0:22,0:22:30.10:0,30,757	0/0:24,0:25:44.79:0,45,1065	0/0:6,0:6:18.06:0,18,450
chr10	106302491	.	GGCA	G	663.98	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=4.619;DP=389;FS=11.309;HRun=0;HaplotypeScore=62.2042;InbreedingCoeff=0.9007;MQ=53.32;MQ0=10;MQRankSum=0.033;QD=41.50;ReadPosRankSum=2.674;VQSLOD=4.4065;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:72.25:0,72,1740	1/1:1,15:16:12.25:750,12,0	./.	./.	0/0:7,0:7:14.55:0,15,369	0/0:10,0:10:17.43:0,17,443	0/0:37,0:34:93.32:0,93,2270	0/0:15,0:14:27.09:0,27,625	0/0:6,0:6:18.06:0,18,443	0/0:14,0:14:36.12:0,36,838	0/0:7,0:7:17.56:0,18,443	0/0:15,0:15:39.13:0,39,890	0/0:13,0:13:36.12:0,36,886	0/0:21,0:21:63.22:0,63,1514	0/0:15,0:15:42.13:0,42,974	0/0:16,0:16:48.16:0,48,1182	0/0:32,0:30:81.28:0,81,1944	0/0:20,0:18:54.16:0,54,1259	0/0:14,0:12:27.09:0,27,639	0/0:5,0:5:15.05:0,15,369	0/0:13,0:13:33.11:0,33,789	0/0:10,0:10:27.08:0,27,612	0/0:9,0:9:24.08:0,24,569	0/0:20,0:19:54.19:0,54,1312	0/0:11,0:11:30.06:0,30,685	0/0:11,0:11:33.11:0,33,798	0/0:12,0:12:36.12:0,36,872	0/0:6,0:6:18.06:0,18,430
chr10	106307985	.	T	TGG	662.16	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=2.184;DP=387;FS=2.455;HRun=0;HaplotypeScore=53.9227;InbreedingCoeff=0.5675;MQ=39.28;MQ0=41;MQRankSum=3.627;QD=6.25;ReadPosRankSum=-2.900;VQSLOD=1.9655;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:32.91:0,33,411	0/0:4,0:4:8.96:0,9,91	0/1:35,0:3:5.76:6,0,26	0/0:41,0:15:8.64:0,9,112	0/0:13,0:10:24.01:0,24,281	0/0:8,0:7:18.04:0,18,216	0/0:14,0:11:21.07:0,21,266	1/1:8,7:15:20.50:243,21,0	0/0:5,0:5:15.05:0,15,189	0/0:9,0:8:24.07:0,24,302	0/0:10,0:9:24.03:0,24,283	0/0:19,0:15:39.13:0,39,503	0/0:11,0:10:26.97:0,27,302	0/0:11,0:9:21.06:0,21,261	0/0:14,0:13:39.12:0,39,477	0/0:9,0:7:21.06:0,21,266	0/0:23,0:20:39.48:0,39,447	0/0:13,0:11:21.07:0,21,285	1/1:6,6:11:25.61:239,26,0	0/1:13,0:13:44.80:99,0,45	0/1:11,0:10:10.94:90,0,11	0/0:5,0:5:12.02:0,12,138	0/0:10,0:9:24.05:0,24,291	0/0:8,0:7:8.52:0,9,92	0/0:13,0:10:24.08:0,24,301	0/0:14,0:13:36.12:0,36,470	1/1:17,0:13:13.52:137,14,0	0/0:7,0:3:9.03:0,9,145
chr10	106308858	.	C	CA	1340.13	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=10.339;DP=521;FS=3.968;HRun=0;HaplotypeScore=66.7110;InbreedingCoeff=0.8326;MQ=69.57;MQ0=17;MQRankSum=-1.152;QD=11.17;ReadPosRankSum=-0.485;VQSLOD=3.7723;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,143,1849	0/0:7,0:7:2.86:0,3,12	0/0:60,0:22:44.48:0,44,471	0/1:45,0:16:3.13:3,0,103	0/0:13,0:13:36.09:0,36,480	0/0:12,0:12:36.12:0,36,501	0/0:10,0:10:27.08:0,27,349	1/1:7,13:21:7.56:351,8,0	0/0:13,0:13:36.07:0,36,457	0/0:19,0:19:51.15:0,51,693	0/0:14,0:13:33.06:0,33,422	0/0:10,0:10:30.09:0,30,403	0/0:5,0:5:14.94:0,15,183	0/0:8,0:8:24.08:0,24,327	0/0:13,0:13:36.12:0,36,501	0/0:5,0:5:15.05:0,15,209	0/0:36,0:36:96.71:0,97,1344	0/0:37,0:37:99:0,102,1366	1/1:4,7:11:12.43:208,12,0	1/1:3,7:10:12.52:141,13,0	1/1:2,8:10:8.40:230,8,0	0/0:9,0:9:27:0,27,321	0/0:9,0:9:26.73:0,27,324	0/0:16,0:16:45.09:0,45,587	0/0:12,0:12:36.11:0,36,487	0/0:22,0:22:54.91:0,55,761	1/1:3,20:22:53.06:569,53,0	0/0:19,0:19:57.10:0,57,730
chr10	106309451	.	TCGG	T	283.78	PASS	AB=0.871;AC=9;AF=0.167;AN=54;BaseQRankSum=7.082;DP=600;FS=16.161;HRun=0;HaplotypeScore=106.4904;InbreedingCoeff=-0.0082;MQ=53.54;MQ0=31;MQRankSum=-3.663;QD=1.65;ReadPosRankSum=-0.480;VQSLOD=1.1081;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,4:21:71.88:72,0,368	0/0:6,0:4:3.01:0,3,53	0/0:44,0:16:9.55:0,10,366	0/0:50,1:14:28.24:0,28,449	0/0:4,1:2:0:0,0,0	0/0:16,0:12:9.03:0,9,155	0/1:43,6:46:86.96:87,0,975	0/1:6,2:7:10.94:97,0,11	0/0:35,2:34:47.67:0,48,1101	0/0:17,0:13:30.54:0,31,560	0/0:5,0:3:3.01:0,3,37	0/0:21,1:19:42.14:0,42,910	0/0:17,0:17:39.12:0,39,761	0/0:27,0:24:57.14:0,57,1166	0/0:21,1:22:11.17:0,11,922	0/0:27,1:26:21.97:0,22,1328	0/0:30,2:32:24.82:0,25,1433	0/0:24,1:25:10.29:0,10,1145	0/1:17,1:10:31.55:32,0,133	./.	1/1:31,5:27:2.96:21,3,0	0/0:8,0:4:3.01:0,3,70	0/0:12,0:8:5.03:0,5,74	0/0:33,4:32:62.27:0,62,1414	0/0:10,0:8:8.96:0,9,147	0/1:17,1:15:13.76:14,0,703	0/1:9,3:7:7.73:58,0,8	0/1:6,1:7:35.35:35,0,295
chr10	106309513	.	CCT	C	325.31	PASS	AB=0.863;AC=13;AF=0.283;AN=46;BaseQRankSum=6.304;DP=531;FS=1.730;HRun=0;HaplotypeScore=75.7266;InbreedingCoeff=-0.1302;MQ=31.13;MQ0=163;MQRankSum=-4.790;QD=1.27;ReadPosRankSum=-1.895;VQSLOD=0.9767;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,1:14:4.07:0,4,263	0/1:9,1:2:26.77:29,0,27	./.	./.	0/0:13,2:5:0:0,0,0	0/0:19,1:9:14.90:0,15,268	0/0:39,4:28:27.25:0,27,481	./.	0/1:24,3:22:62.41:62,0,694	0/1:24,2:14:47.48:47,0,500	./.	0/0:32,2:25:42.53:0,43,670	0/1:11,2:12:53.91:54,0,267	0/0:16,1:16:16.95:0,17,417	0/1:22,6:25:11.20:11,0,868	0/0:33,1:29:13.28:0,13,874	0/1:19,4:19:44.61:45,0,441	0/1:15,4:18:41.35:41,0,603	0/0:15,0:4:8.96:0,9,123	0/1:6,1:1:0:0,0,0	1/1:31,7:13:8.64:96,9,0	./.	0/0:3,1:3:0:0,0,0	0/1:24,5:23:8.99:9,0,492	0/0:22,1:10:13.15:0,13,143	0/1:27,2:14:29.27:29,0,578	0/1:5,3:4:22.86:33,0,23	0/0:8,0:5:12.01:0,12,184
chr10	106309527	.	CCT	C	1185.75	PASS	AB=0.824;AC=21;AF=0.404;AN=52;BaseQRankSum=7.122;DP=534;FS=4.881;HRun=0;HaplotypeScore=86.3718;InbreedingCoeff=-0.5683;MQ=29.80;MQ0=149;MQRankSum=-5.867;QD=2.50;ReadPosRankSum=-2.832;VQSLOD=1.0407;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,4:16:17.96:18,0,246	0/0:7,0:1:3.01:0,3,54	./.	./.	0/0:10,2:4:0:0,0,0	0/1:17,4:13:55.47:55,0,313	0/1:36,12:34:91.32:91,0,331	0/1:19,2:7:70:70,0,90	0/1:24,6:25:99:114,0,522	0/1:29,1:17:25.11:25,0,628	0/1:7,2:5:0:0,0,0	0/1:22,6:21:45.61:46,0,478	0/1:10,3:12:59.84:60,0,232	0/1:10,4:13:78.75:79,0,237	0/1:17,8:21:87.77:88,0,590	0/1:24,5:25:99:153,0,562	0/1:18,7:20:74.44:74,0,309	0/1:15,4:18:83.79:84,0,500	0/1:19,2:6:65.53:66,0,94	0/1:4,2:2:0.06:0,0,0	0/1:32,5:15:5.92:16,0,6	0/0:14,1:9:0.47:0,0,1	0/1:4,2:3:0:0,0,0	0/1:23,9:24:44.72:45,0,249	0/0:16,3:9:4.26:0,4,41	0/1:24,4:16:99:123,0,445	0/1:5,4:6:58.23:107,0,58	0/0:6,0:4:6.02:0,6,108
chr10	106309535	.	CCT	C	1853.31	PASS	AB=0.802;AC=22;AF=0.423;AN=52;BaseQRankSum=5.690;DP=546;FS=1.832;HRun=0;HaplotypeScore=90.9971;InbreedingCoeff=-0.6232;MQ=31.94;MQ0=114;MQRankSum=-1.992;QD=3.81;ReadPosRankSum=-1.716;VQSLOD=2.0074;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,3:16:14.98:0,15,213	0/0:7,0:2:3.01:0,3,52	./.	./.	0/0:10,2:5:0:0,0,0	0/1:16,6:16:46.69:47,0,285	0/1:39,8:35:99:110,0,313	0/1:18,2:11:73.61:74,0,144	0/1:18,10:24:99:155,0,330	0/1:28,3:20:79.86:80,0,582	0/0:9,2:9:2.71:0,3,18	0/1:24,4:22:45.71:46,0,356	0/1:10,8:18:98.88:99,0,160	0/1:8,10:17:99:189,0,105	0/1:18,9:23:99:138,0,480	0/1:26,4:26:99:153,0,392	0/1:14,15:25:99:253,0,244	0/1:15,6:21:99:140,0,377	0/1:23,1:10:28.87:29,0,123	0/1:6,2:4:0.06:0,0,0	0/1:25,9:17:82.64:126,0,83	0/1:10,2:9:12.47:35,0,12	1/1:3,2:3:2.80:42,3,0	0/1:18,12:22:72.09:72,0,94	0/1:17,5:12:31.81:32,0,65	0/1:20,2:18:84.91:85,0,277	0/1:6,4:7:60.49:88,0,60	0/0:6,0:4:4.41:0,4,102
chr10	106309537	.	T	TCTGC	2884.76	PASS	AB=0.975;AC=25;AF=0.481;AN=52;BaseQRankSum=5.240;DP=576;FS=1.745;HRun=0;HaplotypeScore=124.1631;InbreedingCoeff=-0.6445;MQ=32.70;MQ0=111;MQRankSum=-2.077;QD=5.25;ReadPosRankSum=-3.403;VQSLOD=1.6275;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:17:6.82:7,0,185	0/0:7,0:2:3.01:0,3,52	./.	./.	1/1:15,0:8:2.94:25,3,0	0/1:22,0:16:34.54:35,0,306	0/1:47,2:37:99:176,0,289	0/1:21,0:12:99:131,0,138	0/1:28,0:24:99:228,0,311	0/1:31,1:22:99:156,0,570	0/0:11,0:9:2.01:0,2,6	0/1:22,8:24:33.65:34,0,345	0/1:18,0:18:99:150,0,141	0/1:21,0:20:99:232,0,100	0/1:28,0:24:99:277,0,479	0/1:25,4:28:99:282,0,374	0/1:29,0:26:99:319,0,241	0/1:22,0:22:99:250,0,364	0/1:27,0:13:99:128,0,103	0/1:8,0:4:0.32:0,0,0	0/1:36,0:19:76.36:128,0,76	0/1:13,0:10:0.46:37,0,0	1/1:8,0:6:3.01:42,3,0	0/1:30,0:23:92.45:99,0,92	0/1:22,0:12:32.59:33,0,69	0/1:22,0:18:99:161,0,238	0/1:10,0:7:60.49:93,0,60	0/0:7,0:5:2.99:0,3,100
chr10	106309968	.	AGT	A	3233.06	PASS	AB=0.771;AC=12;AF=0.214;AN=56;BaseQRankSum=12.289;DP=796;FS=2.766;HRun=0;HaplotypeScore=114.1441;InbreedingCoeff=0.7781;MQ=67.42;MQ0=2;MQRankSum=1.482;QD=17.11;ReadPosRankSum=0.080;VQSLOD=3.7850;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,2:33:23.37:23,0,750	1/1:1,7:8:12.03:146,12,0	0/0:33,1:22:24.75:0,25,385	0/0:49,0:35:53.40:0,53,690	0/0:31,1:32:32.64:0,33,885	0/0:22,1:23:11.73:0,12,689	0/0:23,1:24:14.85:0,15,735	1/1:8,25:33:75.14:833,75,0	0/0:25,0:25:69.22:0,69,1078	0/0:32,0:32:72.15:0,72,1079	0/0:18,0:18:42.09:0,42,626	0/0:26,1:27:26.69:0,27,869	0/0:22,1:23:23.78:0,24,832	0/0:31,0:31:72.21:0,72,1110	0/0:50,1:51:56.20:0,56,1628	0/0:33,0:33:81.24:0,81,1235	0/0:40,0:40:99:0,102,1568	0/0:21,0:21:51.62:0,52,790	0/1:6,12:18:12.28:328,0,12	1/1:2,14:16:35.95:436,36,0	1/1:14,43:57:84.09:996,84,0	0/0:17,0:17:42.13:0,42,647	0/0:23,0:23:60.15:0,60,891	0/0:30,3:33:47.87:0,48,1245	0/0:19,0:19:42.14:0,42,678	0/0:38,1:39:71.92:0,72,1525	1/1:2,22:24:54.17:655,54,0	0/0:13,0:13:33.08:0,33,491
chr10	106310096	.	AGT	A	1025.04	PASS	AB=0.971;AC=13;AF=0.241;AN=54;BaseQRankSum=7.443;DP=809;FS=3.230;HRun=0;HaplotypeScore=113.0321;InbreedingCoeff=0.4140;MQ=56.00;MQ0=18;MQRankSum=1.919;QD=3.58;ReadPosRankSum=-2.660;VQSLOD=2.1758;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,1:40:18.37:18,0,369	0/0:3,0:10:2.73:0,3,12	./.	0/0:54,0:16:5.74:0,6,38	0/1:19,3:22:29.31:29,0,317	0/0:22,0:22:35.68:0,36,376	0/0:26,0:26:25.55:0,26,501	1/1:18,19:35:35.62:396,36,0	0/1:29,0:29:4.37:4,0,582	0/0:33,0:32:10.56:0,11,591	0/0:24,0:23:43.80:0,44,483	0/0:28,0:27:32.09:0,32,626	0/0:21,0:21:20.13:0,20,403	0/0:23,0:23:20.73:0,21,465	0/0:35,0:35:53.73:0,54,703	0/0:43,0:43:22.41:0,22,790	0/0:23,3:24:41.70:0,42,487	0/0:21,0:21:35.89:0,36,405	1/1:24,0:21:6.68:127,7,0	0/1:16,0:16:17.39:19,0,17	1/1:52,0:48:57.29:548,57,0	0/0:23,0:21:22.22:0,22,312	0/0:15,0:15:23.92:0,24,212	0/0:33,2:35:18.57:0,19,825	0/0:17,2:19:19.88:0,20,302	0/1:35,0:34:1.80:2,0,565	1/1:31,0:31:5.99:40,6,0	0/0:27,0:27:0.13:0,0,605
chr10	106310116	.	TGTGA	T	1820.32	PASS	AB=0.840;AC=13;AF=0.232;AN=56;BaseQRankSum=6.192;DP=774;FS=18.729;HRun=0;HaplotypeScore=133.1889;InbreedingCoeff=0.4055;MQ=55.10;MQ0=16;MQRankSum=0.934;QD=7.85;ReadPosRankSum=-2.828;VQSLOD=1.2429;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:51.23:0,51,805	0/0:11,0:10:4.72:0,5,36	1/1:20,0:1:1.25:3,1,0	0/0:41,0:14:7.20:0,7,105	0/0:29,0:29:37.93:0,38,650	0/1:23,0:23:5.88:6,0,564	0/1:29,0:29:24.55:25,0,737	1/1:28,0:26:26.61:488,27,0	0/0:29,0:29:49.44:0,49,1120	0/0:28,0:28:17.64:0,18,997	0/0:26,0:25:24.55:0,25,604	0/0:28,0:27:65.61:0,66,1085	0/1:19,0:19:7.58:8,0,558	0/0:25,0:25:26.95:0,27,875	0/0:35,0:35:82.14:0,82,1121	0/0:42,0:42:78.73:0,79,1267	0/0:23,0:21:31.33:0,31,745	0/0:17,0:17:23.41:0,23,612	0/1:9,11:17:9.84:288,0,10	0/1:4,16:20:17.01:53,0,17	1/1:37,7:40:86.86:978,87,0	0/0:25,0:23:18.57:0,19,499	0/0:16,0:16:32.93:0,33,380	0/0:37,0:37:62.16:0,62,1452	0/0:20,0:20:40.38:0,40,479	0/0:38,0:37:2.96:0,3,1004	1/1:2,26:28:7.40:131,7,0	0/0:28,0:28:29.02:0,29,1238
chr10	106310118	.	TGA	T	870.65	PASS	AB=0.923;AC=25;AF=0.446;AN=56;BaseQRankSum=7.774;DP=772;FS=1.076;HRun=0;HaplotypeScore=112.9860;InbreedingCoeff=-0.1292;MQ=55.83;MQ0=15;MQRankSum=0.323;QD=1.54;ReadPosRankSum=0.527;VQSLOD=1.9402;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,7:43:20.97:21,0,257	0/0:11,0:10:3.91:0,4,22	1/1:21,0:2:1.72:4,2,0	0/0:44,0:16:2.31:0,2,72	0/1:29,0:29:0.57:1,0,335	0/1:24,0:24:35.25:35,0,279	0/1:29,0:29:2.90:3,0,495	0/1:29,0:27:6.02:123,0,6	0/1:23,5:28:54.30:54,0,467	0/0:28,0:29:36.97:0,37,565	0/0:23,0:25:18.48:0,18,322	0/1:23,4:26:17.33:17,0,561	0/1:19,0:19:12.88:13,0,220	0/1:22,2:24:58.75:59,0,442	0/1:29,5:34:23.22:23,0,491	0/1:37,5:42:20.67:21,0,490	0/0:24,0:22:25.26:0,25,422	0/1:16,1:17:10.43:10,0,297	1/1:20,0:17:9.28:141,9,0	1/1:18,0:18:2.98:24,3,0	1/1:41,1:38:44.35:325,44,0	0/1:20,5:23:31.58:32,0,212	0/0:15,0:15:11.98:0,12,117	0/0:35,0:37:8.43:0,8,642	0/0:20,0:20:15.03:0,15,184	0/1:32,4:37:75.97:76,0,387	1/1:28,0:28:5.85:47,6,0	0/1:27,1:29:3.97:4,0,659
chr10	106310860	.	T	TAC	152.60	PASS	AB=0.978;AC=9;AF=0.196;AN=46;BaseQRankSum=-0.875;DP=437;FS=10.302;HRun=0;HaplotypeScore=70.2284;InbreedingCoeff=0.2434;MQ=62.50;MQ0=15;MQRankSum=0.180;QD=1.73;ReadPosRankSum=-1.234;VQSLOD=0.2942;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:11.83:0,12,102	0/0:3,0:3:0:0,0,0	./.	./.	0/0:13,0:13:2.99:0,3,24	1/1:12,0:12:2.98:22,3,0	1/1:18,6:24:12.51:175,13,0	./.	0/0:16,0:14:8.81:0,9,81	1/1:18,0:18:0.47:1,0,0	0/0:9,0:9:5.96:0,6,50	0/0:15,0:14:8.79:0,9,86	0/0:18,0:17:5.88:0,6,63	0/1:13,1:14:34.53:35,0,36	0/0:12,0:12:3.01:0,3,32	0/1:13,0:13:0:0,0,0	0/0:22,0:21:10.52:0,11,112	0/0:17,0:16:1.25:0,1,27	./.	./.	0/0:27,0:25:0.46:0,0,1	0/0:16,0:16:3:0,3,32	0/0:8,0:8:2.84:0,3,14	0/0:25,0:24:18.34:0,18,170	0/1:7,0:6:22.75:28,0,23	0/0:13,0:13:8.21:0,8,65	0/0:20,0:19:2.37:0,2,14	0/0:5,0:5:2.86:0,3,21
chr10	106318609	.	TACAC	T	2666.48	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.467;DP=724;FS=1.577;HRun=0;HaplotypeScore=121.8598;InbreedingCoeff=0.9907;MQ=70.07;MQ0=8;MQRankSum=1.498;QD=18.65;ReadPosRankSum=-0.480;VQSLOD=2.9495;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,126,2675	1/1:3,9:12:18.06:288,18,0	0/0:37,1:20:30:0,30,376	0/0:32,0:19:14.98:0,15,181	0/0:14,0:14:27.08:0,27,558	0/0:22,0:22:48.10:0,48,877	0/0:34,0:34:78.52:0,79,1810	1/1:10,16:25:41.66:510,42,0	0/0:35,0:35:75.15:0,75,1361	0/0:19,0:20:53.25:0,53,912	0/0:15,0:16:29.83:0,30,495	0/0:33,0:34:86.61:0,87,1633	0/0:21,0:21:37.50:0,38,907	0/0:22,0:24:59.91:0,60,1062	0/0:27,0:27:67.43:0,67,1262	0/0:34,0:34:75.23:0,75,1535	0/0:28,0:28:69.20:0,69,1448	0/0:28,0:28:62.39:0,62,1379	1/1:10,13:23:39.06:518,39,0	1/1:3,10:13:18.06:304,18,0	1/1:8,31:40:42.09:677,42,0	0/0:9,0:11:23.82:0,24,510	0/0:13,0:13:27.08:0,27,528	0/0:51,0:54:99:0,123,2385	0/0:12,0:12:21.07:0,21,397	0/0:23,0:23:63.18:0,63,1185	1/1:9,18:28:35.95:557,36,0	0/0:7,0:7:21.07:0,21,497
chr10	106321473	.	AT	A	6334.45	PASS	AB=0.787;AC=54;AF=0.964;AN=56;BaseQRankSum=-0.981;DP=368;FS=13.708;HRun=1;HaplotypeScore=156.9707;InbreedingCoeff=-0.0478;MQ=59.01;MQ0=1;MQRankSum=-2.867;QD=17.21;ReadPosRankSum=-0.228;VQSLOD=3.6356;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,2:14:30.38:266,30,0	1/1:6,0:6:10.50:52,10,0	0/1:10,5:9:59.88:127,0,60	0/1:10,3:7:29.77:30,0,135	1/1:19,7:26:54.01:383,54,0	1/1:9,1:10:16.85:117,17,0	1/1:11,1:12:20.14:143,20,0	1/1:0,14:14:42.06:506,42,0	1/1:7,4:10:11.94:171,12,0	1/1:18,5:23:62.70:431,63,0	1/1:14,2:16:34.94:212,35,0	1/1:6,1:7:14.68:118,15,0	1/1:8,0:8:17.31:94,17,0	1/1:1,4:5:6.01:64,6,0	1/1:9,0:9:15.69:80,16,0	1/1:13,3:16:12.77:227,13,0	1/1:11,0:11:19.24:121,19,0	1/1:8,2:10:16.82:161,17,0	1/1:0,15:15:41.85:447,42,0	1/1:0,22:22:51.16:662,51,0	1/1:0,9:9:18.06:242,18,0	1/1:11,3:14:35.65:235,36,0	1/1:11,3:14:37.44:301,37,0	1/1:8,1:9:13.50:59,14,0	1/1:16,0:16:33.64:209,34,0	1/1:13,5:18:38.21:265,38,0	1/1:0,12:12:30.10:403,30,0	1/1:9,3:12:28.99:210,29,0
chr10	106323166	.	AGT	A	190.96	PASS	AB=0.958;AC=14;AF=0.269;AN=52;BaseQRankSum=5.300;DP=535;FS=3.000;HRun=0;HaplotypeScore=66.1711;InbreedingCoeff=-0.0620;MQ=67.33;MQ0=14;MQRankSum=0.316;QD=0.93;ReadPosRankSum=0.277;VQSLOD=1.5645;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:18.04:0,18,234	1/1:6,0:10:5.68:28,6,0	./.	./.	0/1:14,0:13:14.42:14,0,123	0/1:17,1:18:8.38:8,0,226	0/0:25,0:25:12.02:0,12,157	0/0:41,0:38:17.81:0,18,123	0/1:21,2:23:17.54:18,0,121	0/0:10,0:10:4.25:0,4,33	0/1:11,1:12:23.39:23,0,80	0/0:12,0:12:23.97:0,24,230	0/0:11,0:11:9.01:0,9,113	0/0:17,0:17:6.02:0,6,86	0/1:28,2:30:2.38:2,0,300	0/0:18,0:17:17.98:0,18,201	0/0:30,1:31:24.65:0,25,604	0/0:16,0:18:12:0,12,120	1/1:20,0:19:6.90:44,7,0	0/0:9,0:14:9:0,9,94	0/1:38,0:36:30.52:31,0,38	0/0:9,0:9:12.03:0,12,158	0/1:6,0:6:7.79:8,0,18	0/0:36,3:39:3.53:0,4,357	0/1:7,0:7:18.91:23,0,19	0/0:13,0:14:8.99:0,9,92	0/1:11,0:11:33.11:50,0,33	0/1:14,3:17:87.76:88,0,175
chr10	106323211	.	GTA	G	1008.07	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=2.058;DP=521;FS=11.525;HRun=0;HaplotypeScore=67.7880;InbreedingCoeff=0.7583;MQ=68.73;MQ0=14;MQRankSum=-0.635;QD=8.47;ReadPosRankSum=-1.966;VQSLOD=1.6643;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:54:0,54,635	0/0:8,0:8:9.29:0,9,50	0/0:27,0:14:32.25:0,32,375	0/0:30,0:14:35.04:0,35,326	0/0:15,0:13:15.76:0,16,195	0/0:22,0:22:43.13:0,43,560	0/0:25,0:25:60.46:0,60,621	1/1:24,0:24:59.80:494,60,0	0/0:20,0:20:11.83:0,12,319	0/0:18,0:17:41.91:0,42,361	0/0:14,0:13:15.80:0,16,233	0/0:13,0:13:23.60:0,24,271	0/0:14,0:14:35.97:0,36,353	0/0:13,0:13:35.63:0,36,339	0/0:26,0:26:56.09:0,56,722	0/0:16,0:16:35.98:0,36,395	0/0:32,0:32:59.52:0,60,903	0/0:12,0:11:21.01:0,21,232	1/1:3,8:10:27.85:264,28,0	1/1:22,0:21:11.14:198,11,0	1/1:6,17:20:6.02:91,6,0	0/0:14,0:14:36:0,36,383	0/0:9,0:9:20.65:0,21,158	0/0:37,0:37:63.72:0,64,745	0/1:5,0:5:6.43:6,0,85	0/0:15,0:15:35.99:0,36,344	1/1:3,11:14:9.02:116,9,0	0/1:20,0:19:4.95:5,0,466
chr10	106323957	.	G	GC	7291.17	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-14.721;DP=823;FS=1.037;HRun=0;HaplotypeScore=79.7318;InbreedingCoeff=0.9934;MQ=88.97;MQ0=0;MQRankSum=0.474;QD=44.46;ReadPosRankSum=-0.457;VQSLOD=4.9019;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1841	1/1:0,5:5:11.80:191,12,0	0/0:30,0:30:42.73:0,43,930	0/0:41,0:41:99:0,117,1589	0/0:36,0:36:99:0,105,1466	0/0:19,0:19:57.15:0,57,759	0/0:32,0:32:96.32:0,96,1342	1/1:3,21:24:60.20:948,60,0	0/0:13,0:13:39.11:0,39,526	0/0:35,0:35:99:0,105,1468	0/0:22,0:22:60.20:0,60,837	0/0:33,0:33:99:0,99,1383	0/0:23,0:23:69.23:0,69,964	0/0:24,0:24:72.21:0,72,971	0/0:38,0:38:99:0,114,1556	0/0:31,0:31:90.27:0,90,1224	0/0:39,0:39:99:0,111,1551	0/0:21,0:21:60.08:0,60,772	1/1:0,23:24:72.22:1117,72,0	1/1:0,18:18:51.17:815,51,0	1/1:0,62:62:99:2878,181,0	0/0:27,0:27:81.27:0,81,1133	0/0:28,0:28:81.27:0,81,1130	0/0:45,0:45:99:0,132,1839	0/0:24,0:24:72.24:0,72,1007	0/0:25,0:25:75.24:0,75,1030	1/1:2,29:31:84.29:1342,84,0	0/0:28,0:28:78.26:0,78,1090
chr10	106326396	.	GTGTGTGTC	G	2093.34	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=6.578;DP=733;FS=0.980;HRun=0;HaplotypeScore=181.0595;InbreedingCoeff=0.8386;MQ=57.28;MQ0=12;MQRankSum=-4.965;QD=13.25;ReadPosRankSum=-4.362;VQSLOD=1.8280;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:51:99:0,116,3018	1/1:5,0:5:7.96:71,8,0	0/0:15,0:9:13.50:0,14,66	0/1:21,0:9:19.58:27,0,20	0/0:24,0:24:63.11:0,63,1734	0/0:18,0:17:40.70:0,41,1402	0/0:42,0:42:99:0,101,2928	1/1:21,0:18:30.80:374,31,0	0/0:21,0:21:60.10:0,60,1719	0/0:34,0:32:78.92:0,79,1460	0/0:11,0:10:30:0,30,563	0/0:23,0:22:63.14:0,63,1806	0/0:20,0:20:46.29:0,46,1961	0/0:18,0:18:48.14:0,48,1579	0/0:35,0:35:99:0,102,3749	0/0:31,0:31:87.09:0,87,2447	0/0:57,0:57:99:0,157,4591	0/0:28,0:28:71.37:0,71,1849	1/1:9,24:32:68.70:869,69,0	1/1:5,15:20:2.25:81,2,0	1/1:34,0:33:39.02:430,39,0	0/0:23,0:23:60.18:0,60,2211	0/0:22,0:22:48.07:0,48,1137	0/0:31,0:31:87.15:0,87,2206	0/0:29,0:28:66.18:0,66,2383	0/0:32,0:32:83.29:0,83,2559	1/1:3,21:24:17.69:420,18,0	0/0:8,0:8:20.05:0,20,402
chr10	106326404	.	CTG	C	302.93	PASS	AB=0.958;AC=15;AF=0.268;AN=56;BaseQRankSum=7.552;DP=719;FS=1.973;HRun=0;HaplotypeScore=106.1856;InbreedingCoeff=0.1223;MQ=55.67;MQ0=11;MQRankSum=-0.774;QD=1.00;ReadPosRankSum=0.072;VQSLOD=2.1715;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:48,3:49:20.11:20,0,917	1/1:5,2:7:15:150,15,0	0/0:10,0:7:3:0,3,25	0/1:27,0:13:1.45:1,0,68	0/0:24,0:24:4.30:0,4,490	0/0:18,0:17:12.69:0,13,492	0/1:39,0:40:99:100,0,765	0/0:25,0:22:9.38:0,9,67	0/0:22,0:22:14.55:0,15,472	0/1:31,3:32:2.81:3,0,452	0/1:10,0:10:13.19:13,0,163	0/0:21,0:21:48.14:0,48,706	0/1:18,1:20:10.52:11,0,514	0/0:20,1:21:10.42:0,10,595	0/0:38,0:38:96.30:0,96,1446	0/0:31,1:32:31.37:0,31,895	0/0:55,0:55:66.78:0,67,1675	0/0:24,1:26:16.02:0,16,639	0/1:30,0:29:29.53:30,0,62	1/1:16,0:16:2.70:13,3,0	0/0:32,0:31:8.09:0,8,52	0/1:21,3:24:6.61:7,0,702	0/1:20,2:22:45.57:46,0,235	0/0:30,0:31:48.80:0,49,851	0/0:25,0:25:54.15:0,54,778	0/0:29,0:29:30.81:0,31,771	1/1:22,0:22:14.29:65,14,0	0/0:7,0:7:8.92:0,9,94
chr10	106327332	.	AGTC	A	161.12	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.094;DP=773;FS=0.000;HRun=0;HaplotypeScore=107.5535;InbreedingCoeff=0.9819;MQ=91.40;MQ0=2;MQRankSum=-2.434;QD=32.22;ReadPosRankSum=0.914;VQSLOD=3.7634;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,3185	1/1:0,5:5:15.05:250,15,0	0/0:32,0:31:83.65:0,84,1759	0/0:41,0:38:86.76:0,87,1802	0/0:21,0:21:51.18:0,51,1144	0/0:18,0:18:54.19:0,54,1219	0/0:34,0:34:96.33:0,96,2122	0/0:37,0:37:99:0,99,2240	0/0:15,0:15:42.14:0,42,923	0/0:29,0:29:84.25:0,84,1804	0/0:19,0:19:42.14:0,42,949	0/0:24,0:24:66.23:0,66,1467	0/0:33,0:33:96.33:0,96,2157	0/0:26,0:26:75.26:0,75,1678	0/0:33,0:33:93.28:0,93,2053	0/0:29,0:29:78.27:0,78,1762	0/0:36,0:36:96.33:0,96,2168	0/0:32,0:32:93.32:0,93,2071	0/0:24,0:24:69.24:0,69,1555	0/0:22,0:22:57.20:0,57,1262	0/0:49,0:48:99:0,132,2939	0/0:20,0:20:54.19:0,54,1196	0/0:16,0:16:39.13:0,39,882	0/0:49,0:49:99:0,138,3123	0/0:15,0:15:42.14:0,42,939	0/0:30,0:30:84.29:0,84,1889	0/0:29,0:29:75.26:0,75,1661	0/0:8,0:8:24.08:0,24,543
chr10	106335447	.	C	CAT	561.74	PASS	AB=0.820;AC=6;AF=0.107;AN=56;BaseQRankSum=14.044;DP=867;FS=42.720;HRun=0;HaplotypeScore=327.7316;InbreedingCoeff=-0.1420;MQ=34.83;MQ0=1;MQRankSum=-7.044;QD=2.41;ReadPosRankSum=1.291;VQSLOD=1.5396;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,2:20:33.36:0,33,439	0/1:9,3:12:10.60:11,0,224	0/0:15,0:10:33.11:0,33,504	0/0:12,0:7:19.45:0,19,270	0/0:29,5:34:29.76:0,30,336	0/0:27,0:28:5.35:0,5,410	0/0:21,1:22:3.89:0,4,238	0/0:46,0:46:52.48:0,52,1281	0/0:42,1:43:60.51:0,61,920	0/1:58,13:71:99:371,0,1665	0/0:15,4:19:17.93:0,18,206	0/0:55,3:59:3.03:0,3,825	0/0:37,2:40:41:0,41,788	0/0:37,4:41:32.03:0,32,723	0/1:54,5:60:2.15:2,0,866	0/0:36,4:41:10.95:0,11,659	0/0:11,0:11:4.56:0,5,215	0/0:14,0:14:4.70:0,5,399	0/0:22,0:20:42.31:0,42,650	0/0:26,2:28:20.64:0,21,400	0/0:28,0:28:41.94:0,42,528	0/0:33,5:38:34.40:0,34,508	0/0:24,4:28:25.13:0,25,279	0/0:18,0:18:20.92:0,21,248	0/0:27,0:27:19.91:0,20,368	0/1:41,6:47:99:99,0,1302	0/1:27,8:35:99:181,0,524	0/1:4,4:8:11.16:11,0,88
chr10	106335669	.	TAC	T	107.79	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.303;DP=1212;FS=5.565;HRun=0;HaplotypeScore=274.1510;InbreedingCoeff=0.9811;MQ=55.59;MQ0=3;MQRankSum=-2.173;QD=9.80;ReadPosRankSum=-1.986;VQSLOD=2.2966;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,163,2699	1/1:3,8:11:20.92:200,21,0	0/0:36,0:23:44.32:0,44,748	0/0:37,1:25:17.39:0,17,665	0/0:40,0:40:57.72:0,58,1004	0/0:26,0:26:68.63:0,69,1118	0/0:41,0:41:99:0,99,1662	0/0:54,0:54:99:0,129,2177	0/0:52,0:52:99:0,138,2264	0/0:46,0:46:99:0,117,1863	0/0:16,0:16:19.81:0,20,352	0/0:54,0:54:99:0,135,2260	0/0:45,0:45:99:0,113,1885	0/0:47,0:46:99:0,117,1949	0/0:55,0:55:99:0,141,2384	0/0:52,0:52:99:0,129,2154	0/0:41,2:43:39.85:0,40,1797	0/0:27,1:28:41.49:0,41,1096	0/0:33,0:31:76.49:0,76,1245	0/0:27,0:27:38.28:0,38,645	0/0:135,0:135:99:0,337,5473	0/0:44,1:45:95.84:0,96,1593	0/0:26,1:27:59.68:0,60,999	0/0:58,0:58:99:0,150,2528	0/0:33,2:35:62.31:0,62,1043	0/0:54,1:55:99:0,123,2397	0/0:31,0:31:81.25:0,81,1320	0/0:19,0:19:39.13:0,39,662
chr10	106338316	.	A	AGCTCAGTCTCCTCAC	7599.03	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-0.473;DP=407;FS=5.779;HRun=0;HaplotypeScore=171.4033;InbreedingCoeff=0.9221;MQ=71.71;MQ0=0;MQRankSum=-9.230;QD=99.99;ReadPosRankSum=-3.952;VQSLOD=3.5725;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.25:0,72,3181	1/1:3,0:3:6.02:203,6,0	0/0:11,0:11:15.09:0,15,826	0/0:6,0:6:15.05:0,15,516	0/0:7,0:7:21.07:0,21,857	0/0:9,0:9:24.07:0,24,949	0/0:22,0:22:63.20:0,63,2447	1/1:15,0:15:39.13:2168,39,0	0/0:20,0:20:60.21:0,60,2581	0/0:10,0:10:27.09:0,27,1160	0/0:5,0:5:15.05:0,15,684	0/0:19,0:19:57.20:0,57,2597	0/0:14,0:14:39.13:0,39,1718	0/0:17,0:17:51.18:0,51,2257	0/0:8,0:8:24.08:0,24,1049	0/0:11,0:11:33.11:0,33,1466	0/0:39,0:39:99:0,114,4670	0/0:39,0:39:99:0,114,4582	1/1:14,2:19:42.14:2191,42,0	1/1:1,2:3:3.01:226,3,0	1/1:20,10:30:27.47:1780,27,0	0/0:6,0:6:18.06:0,18,821	0/0:7,0:7:21.07:0,21,852	0/0:31,0:31:93.32:0,93,3969	0/0:9,0:9:27.09:0,27,1000	0/0:11,0:11:33.10:0,33,1288	1/1:4,2:6:15.05:1031,15,0	0/0:6,0:6:18.03:0,18,689
chr10	106340197	.	TG	T	191.38	PASS	AB=0.751;AC=2;AF=0.036;AN=56;BaseQRankSum=6.815;DP=627;FS=3.459;HRun=1;HaplotypeScore=69.2717;InbreedingCoeff=-0.0377;MQ=84.54;MQ0=0;MQRankSum=5.873;QD=4.67;ReadPosRankSum=-1.840;VQSLOD=-0.0909;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,105,1584	0/0:9,0:9:27.09:0,27,430	0/1:9,7:16:99:140,0,332	0/1:19,6:25:99:140,0,659	0/0:9,0:9:24.03:0,24,313	0/0:13,0:13:39.12:0,39,599	0/0:31,0:31:90.31:0,90,1433	0/0:19,0:19:54.18:0,54,862	0/0:21,0:21:63.20:0,63,983	0/0:19,0:19:57.16:0,57,793	0/0:10,0:10:27.05:0,27,363	0/0:34,0:34:99:0,102,1581	0/0:22,0:22:66.23:0,66,1055	0/0:23,0:23:69.20:0,69,1053	0/0:23,0:23:69.24:0,69,1103	0/0:27,0:27:81.28:0,81,1289	0/0:39,0:39:99:0,117,1865	0/0:34,0:34:99:0,102,1603	0/0:17,0:17:48.63:0,49,766	0/0:9,0:9:24.01:0,24,312	0/0:66,0:66:99:0,187,2844	0/0:8,0:8:18.02:0,18,216	0/0:10,0:10:24.02:0,24,289	0/0:38,0:38:99:0,114,1820	0/0:14,0:14:32.75:0,33,473	0/0:15,0:15:42.12:0,42,609	0/0:24,0:24:72.25:0,72,1148	0/0:13,0:13:39.13:0,39,618
chr10	106341896	.	GAGGA	G	2695.29	PASS	AB=1.000;AC=20;AF=0.385;AN=52;BaseQRankSum=10.654;DP=687;FS=9.095;HRun=0;HaplotypeScore=118.4191;InbreedingCoeff=0.8232;MQ=55.21;MQ0=17;MQRankSum=-0.716;QD=10.87;ReadPosRankSum=3.421;VQSLOD=2.3281;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:57.20:0,57,1284	0/1:11,0:10:35.77:36,0,36	./.	0/0:36,0:12:0:0,0,0	0/0:25,0:25:24.08:0,24,526	0/0:15,0:15:24.08:0,24,543	0/0:34,0:35:57.16:0,57,1131	./.	0/0:19,0:19:27.06:0,27,556	0/0:25,0:25:48.16:0,48,1009	0/0:9,0:8:12.04:0,12,277	1/1:11,13:24:24:374,24,0	1/1:13,14:27:33.11:515,33,0	1/1:15,7:22:24.08:374,24,0	0/0:31,0:31:54.19:0,54,1258	0/0:29,0:29:48.16:0,48,1078	0/0:37,0:37:84.29:0,84,1902	0/0:15,0:15:21.07:0,21,461	1/1:12,0:18:12:105,12,0	1/1:14,0:28:3:28,3,0	0/1:23,0:23:0:0,0,0	1/1:14,7:21:14.92:231,15,0	1/1:12,3:15:23.95:343,24,0	1/1:16,24:40:47.90:714,48,0	0/0:19,0:19:30.10:0,30,673	0/0:30,0:30:45.07:0,45,966	1/1:5,0:16:18.49:169,18,0	0/0:14,0:14:30.10:0,30,683
chr10	106341901	.	AG	A	115.59	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=7.416;DP=674;FS=1.598;HRun=2;HaplotypeScore=90.9308;InbreedingCoeff=0.5062;MQ=54.38;MQ0=15;MQRankSum=-2.089;QD=2.69;ReadPosRankSum=-0.269;VQSLOD=-0.4236;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,116,1665	1/1:10,0:9:23.44:156,23,0	0/0:42,0:5:14.96:0,15,176	0/0:29,1:8:21.05:0,21,247	0/0:26,0:26:66.20:0,66,923	0/0:16,0:16:40.13:0,40,655	0/0:38,0:38:99:0,114,1599	0/0:18,0:17:46.39:0,46,659	0/0:21,0:21:63.20:0,63,906	0/0:25,0:25:72.23:0,72,1038	0/0:9,0:8:24.06:0,24,312	0/0:23,0:23:31.15:0,31,365	0/0:26,0:26:33.79:0,34,332	0/0:19,0:19:26.28:0,26,457	0/0:30,0:30:87.29:0,87,1271	0/0:29,0:29:84.23:0,84,1181	0/0:40,0:39:90.60:0,91,1539	0/0:13,0:13:30.09:0,30,504	0/1:18,0:17:64.67:65,0,380	0/0:28,0:28:38.46:0,38,723	0/0:18,4:22:38.67:0,39,574	0/0:19,0:19:35.46:0,35,449	0/1:15,0:15:0.90:1,0,277	0/0:39,0:39:41.49:0,41,527	0/0:18,0:18:40.69:0,41,583	0/0:28,0:28:81.27:0,81,1179	0/0:17,0:16:9.53:0,10,196	0/0:14,0:14:36.12:0,36,530
chr10	106341904	.	A	AG	273.37	PASS	AB=0.965;AC=5;AF=0.089;AN=56;BaseQRankSum=6.865;DP=663;FS=0.784;HRun=2;HaplotypeScore=88.9792;InbreedingCoeff=0.3614;MQ=54.29;MQ0=15;MQRankSum=-2.637;QD=4.48;ReadPosRankSum=-1.566;VQSLOD=-0.0620;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:92.08:0,92,1567	1/1:0,9:8:21.07:335,21,0	0/0:42,0:5:14.99:0,15,176	0/0:30,0:7:18.06:0,18,236	0/0:25,0:25:63.21:0,63,876	0/0:16,0:16:33.48:0,33,590	0/0:38,0:38:99:0,109,1494	0/0:19,0:18:19.82:0,20,518	0/0:23,0:23:66.19:0,66,887	0/0:24,0:24:72.24:0,72,1005	0/0:8,0:7:21.03:0,21,271	0/0:22,0:22:50.21:0,50,489	0/0:27,0:27:55.98:0,56,490	0/0:18,0:18:53.32:0,53,549	0/0:29,0:29:87.29:0,87,1217	0/0:27,0:27:81.25:0,81,1109	0/0:37,0:37:77.18:0,77,1414	0/0:14,0:14:12.37:0,12,456	0/1:15,0:14:32.96:33,0,295	0/0:27,0:27:47.70:0,48,704	0/1:21,1:22:18.03:18,0,434	0/0:19,0:19:44.67:0,45,497	0/1:14,1:15:3.18:3,0,369	0/0:39,0:39:81.19:0,81,797	0/0:18,0:18:42.07:0,42,563	0/0:26,0:26:78.26:0,78,1091	0/0:16,0:16:30.99:0,31,275	0/0:14,0:14:36.10:0,36,485
chr10	106344222	.	G	GACC	4898.45	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=3.800;DP=514;FS=4.176;HRun=0;HaplotypeScore=93.8061;InbreedingCoeff=0.9854;MQ=75.01;MQ0=1;MQRankSum=-7.640;QD=42.60;ReadPosRankSum=-4.289;VQSLOD=4.4697;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.26:0,81,1330	0/0:8,0:8:21:0,21,268	0/0:20,0:17:27.07:0,27,518	0/0:18,0:15:22.81:0,23,325	0/0:13,0:13:36.12:0,36,599	0/0:20,0:20:51.17:0,51,845	0/0:36,0:36:99:0,99,1609	1/1:2,17:20:60.19:1253,60,0	0/0:24,0:24:66.21:0,66,1069	0/0:15,0:15:42.09:0,42,643	0/0:6,0:6:12.04:0,12,200	0/0:26,0:26:72.25:0,72,1198	0/0:8,0:8:24.08:0,24,399	0/0:14,0:14:39.13:0,39,644	0/0:17,0:17:48.14:0,48,745	0/0:21,0:21:60.19:0,60,967	0/0:26,0:26:75.26:0,75,1248	0/0:14,0:14:30.10:0,30,499	1/1:5,13:18:48.12:945,48,0	1/1:3,9:13:30.06:563,30,0	1/1:10,36:49:64.92:1362,65,0	0/0:8,0:8:21.07:0,21,350	0/0:10,0:10:27.05:0,27,404	0/0:33,0:33:87.30:0,87,1448	0/0:12,0:12:36.09:0,36,563	0/0:16,0:16:48.16:0,48,794	1/1:1,14:15:36.12:775,36,0	0/0:5,0:5:15.05:0,15,249
chr10	106344242	.	GGT	G	140.49	PASS	AB=0.906;AC=10;AF=0.192;AN=52;BaseQRankSum=3.979;DP=591;FS=7.596;HRun=0;HaplotypeScore=93.5415;InbreedingCoeff=-0.3222;MQ=60.52;MQ0=8;MQRankSum=1.568;QD=0.74;ReadPosRankSum=1.815;VQSLOD=1.1665;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:40,1:39:30.34:30,0,124	0/0:8,0:7:3:0,3,26	./.	./.	0/0:13,0:13:6:0,6,66	0/0:18,0:20:6.28:0,6,187	0/0:37,0:39:21.95:0,22,420	0/0:21,0:20:3.01:0,3,39	0/1:20,2:22:14.50:14,0,180	0/1:16,0:17:5.11:5,0,48	0/0:8,0:8:5.97:0,6,63	0/0:28,0:28:4.07:0,4,195	0/1:9,1:10:17.49:17,0,123	0/1:17,3:19:73.02:73,0,176	0/1:19,0:19:11.35:11,0,238	0/0:19,0:19:12.03:0,12,159	0/1:28,3:31:40.29:40,0,433	0/1:13,2:15:36.67:37,0,286	0/0:22,0:22:0.81:0,1,84	0/0:14,0:14:5:0,5,30	0/0:55,0:56:17.31:0,17,231	0/0:13,0:12:6:0,6,63	0/1:8,1:9:23.53:24,0,55	0/0:31,1:34:0.55:0,1,337	0/0:17,0:17:13.86:0,14,173	0/0:23,0:22:30.05:0,30,332	0/0:13,0:14:14.92:0,15,115	0/1:4,2:6:17.47:17,0,140
chr10	106344613	.	G	GC	151.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.755;DP=630;FS=11.581;HRun=5;HaplotypeScore=72.1540;InbreedingCoeff=0.9549;MQ=73.88;MQ0=0;MQRankSum=-0.370;QD=13.79;ReadPosRankSum=-1.547;VQSLOD=1.5121;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,1498	1/1:6,5:11:21.02:244,21,0	0/0:9,0:9:17.22:0,17,215	0/0:12,0:12:30.05:0,30,304	0/0:15,0:15:33.08:0,33,353	0/0:17,0:17:48.12:0,48,515	0/0:26,0:26:75.17:0,75,798	0/0:21,0:21:39.06:0,39,407	0/0:22,0:22:66.17:0,66,708	0/0:23,0:23:57.13:0,57,599	0/0:15,0:15:42.07:0,42,438	0/0:34,0:34:96.21:0,96,1019	0/0:18,0:18:51.13:0,51,546	0/0:19,0:19:54.13:0,54,578	0/0:21,0:21:54.10:0,54,564	0/0:15,0:15:39.10:0,39,419	0/0:47,0:47:99:0,135,1437	0/0:32,0:32:93.23:0,93,999	0/0:20,0:20:54.10:0,54,567	0/0:15,0:15:33.08:0,33,354	0/0:60,0:60:99:0,153,1635	0/0:10,0:10:27.07:0,27,290	0/0:12,0:12:33.08:0,33,354	0/0:37,0:37:93.23:0,93,999	0/0:21,0:21:60.14:0,60,636	0/0:23,0:23:60.14:0,60,640	0/0:21,0:21:60.14:0,60,636	0/0:4,0:4:12.03:0,12,129
chr10	106344677	.	A	AT	3218.29	PASS	AB=0.889;AC=13;AF=0.232;AN=56;BaseQRankSum=-4.474;DP=614;FS=8.027;HRun=8;HaplotypeScore=63.3885;InbreedingCoeff=0.8775;MQ=69.16;MQ0=0;MQRankSum=0.474;QD=24.20;ReadPosRankSum=-3.252;VQSLOD=2.9879;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,150,1371	1/1:1,11:12:30.09:346,30,0	0/1:7,0:8:17.40:17,0,90	0/0:8,0:7:4.76:0,5,47	0/0:20,0:20:52.84:0,53,472	0/0:23,0:23:60.03:0,60,549	0/0:18,0:18:51.03:0,51,466	1/1:4,21:25:63.17:716,63,0	0/0:20,0:20:53.99:0,54,485	0/0:31,0:31:77.95:0,78,703	0/0:14,0:14:36.02:0,36,329	0/0:40,0:40:99:0,108,988	0/0:17,0:17:45.01:0,45,412	0/0:19,0:19:57.01:0,57,514	0/0:17,0:17:45.01:0,45,409	0/0:19,0:19:54.03:0,54,494	0/0:29,0:29:84.02:0,84,762	0/0:25,0:25:63.03:0,63,577	1/1:7,17:24:26.63:517,27,0	1/1:1,16:17:42.12:481,42,0	1/1:2,29:31:72.21:831,72,0	0/0:22,0:22:65.69:0,66,582	0/0:24,0:24:66.02:0,66,601	0/0:28,0:28:72.03:0,72,658	0/0:17,0:17:43.08:0,43,409	0/0:26,0:26:69.03:0,69,631	1/1:1,14:16:44.97:499,45,0	0/0:12,0:12:27.01:0,27,247
chr10	106347504	.	G	GT	1828.32	PASS	AB=0.906;AC=18;AF=0.321;AN=56;BaseQRankSum=-5.564;DP=560;FS=15.060;HRun=12;HaplotypeScore=64.0539;InbreedingCoeff=0.4256;MQ=71.32;MQ0=0;MQRankSum=0.634;QD=7.71;ReadPosRankSum=-2.211;VQSLOD=0.3119;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:94.43:0,94,694	1/1:1,2:10:17.52:124,18,0	0/1:14,1:13:3.59:4,0,91	0/0:13,0:10:8.29:0,8,33	0/0:19,1:22:11.57:0,12,239	0/0:14,1:16:10.68:0,11,223	0/0:14,0:16:36.84:0,37,250	1/1:17,21:38:3.84:509,4,0	0/0:16,0:16:20.72:0,21,151	0/0:16,1:17:6.56:0,7,211	0/0:18,1:20:2.63:0,3,174	0/0:15,2:17:0.51:0,1,163	0/1:13,0:13:0.44:0,0,128	0/0:15,0:15:20.75:0,21,150	0/1:18,4:22:42.83:43,0,218	0/1:11,4:16:29.47:29,0,130	0/0:33,3:36:38.94:0,39,439	0/0:29,3:34:10.69:0,11,370	1/1:12,7:20:13.91:217,14,0	1/1:5,16:23:29.61:389,30,0	1/1:1,12:15:35.73:320,36,0	0/0:8,0:10:23.85:0,24,175	0/0:10,0:10:1.87:0,2,147	0/0:15,2:17:6.52:0,7,210	0/0:18,0:19:18.27:0,18,265	0/1:22,2:25:10.91:11,0,223	1/1:7,17:26:38.83:354,39,0	0/1:11,1:12:2.35:2,0,148
chr10	106348896	.	TC	T	1821.20	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=7.612;DP=593;FS=6.203;HRun=10;HaplotypeScore=64.7351;InbreedingCoeff=0.8148;MQ=77.97;MQ0=0;MQRankSum=0.307;QD=14.45;ReadPosRankSum=-2.336;VQSLOD=3.2067;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:38,1:39:76.63:0,77,1025	0/1:6,0:6:4.97:5,0,18	0/0:18,0:17:11.01:0,11,125	0/0:20,0:19:20.73:0,21,226	0/1:10,0:10:3.98:4,0,170	0/0:17,1:18:22.02:0,22,437	0/0:36,0:36:99:0,102,1109	1/1:13,7:20:20.64:154,21,0	0/0:20,0:20:57.15:0,57,630	0/0:18,0:18:45.11:0,45,486	0/0:7,0:7:12.02:0,12,125	0/0:26,0:26:63.16:0,63,689	0/0:20,0:20:54.11:0,54,577	0/0:24,0:24:66.12:0,66,690	0/0:26,0:26:69.18:0,69,755	0/0:14,1:15:16.06:0,16,405	0/0:36,1:37:79.07:0,79,1061	0/0:34,1:35:64.12:0,64,906	1/1:6,18:24:56.92:485,57,0	1/1:3,4:7:14.98:126,15,0	1/1:8,34:42:95.97:832,96,0	0/0:11,0:11:27.05:0,27,291	0/0:10,0:10:27.06:0,27,291	0/0:45,1:46:94.27:0,94,1260	0/0:11,0:11:30.05:0,30,332	0/0:20,0:20:39.09:0,39,416	1/1:3,14:17:44.99:391,45,0	0/0:10,0:10:15.03:0,15,158
chr10	106348954	.	A	AG	64.92	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.688;DP=566;FS=6.498;HRun=6;HaplotypeScore=61.9213;InbreedingCoeff=0.8349;MQ=77.92;MQ0=0;MQRankSum=-0.966;QD=9.27;ReadPosRankSum=-0.774;VQSLOD=0.4522;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.13:0,72,719	1/1:2,5:7:12.04:151,12,0	0/0:12,0:11:6.56:0,7,180	0/0:14,0:14:31.86:0,32,283	0/0:11,0:11:33.08:0,33,337	0/0:12,0:12:33.07:0,33,336	0/0:25,0:25:69.13:0,69,691	0/0:19,0:19:28.13:0,28,403	0/0:24,0:24:69.12:0,69,689	0/0:14,0:14:30.05:0,30,297	0/0:8,0:8:21.05:0,21,214	0/0:36,0:36:93.21:0,93,948	0/0:24,0:24:54.11:0,54,550	0/0:28,0:28:84.19:0,84,856	0/0:15,0:15:39.06:0,39,390	0/0:11,0:11:30.05:0,30,299	0/0:28,0:28:78.11:0,78,771	0/0:40,0:40:99:0,114,1152	0/0:24,0:24:60.11:0,60,598	0/0:9,0:9:24.05:0,24,245	0/0:63,0:63:99:0,177,1791	0/0:4,0:4:12.03:0,12,122	0/0:5,0:5:15.03:0,15,153	0/0:43,0:43:99:0,111,1098	0/0:12,0:12:33.07:0,33,336	0/0:14,0:14:42.09:0,42,424	0/0:27,0:27:78.03:0,78,774	0/0:9,0:9:21.05:0,21,214
chr10	106349361	.	TTCTCAGGATTCATGC	T	10394.48	PASS	AB=0.560;AC=11;AF=0.196;AN=56;BaseQRankSum=13.923;DP=649;FS=0.910;HRun=0;HaplotypeScore=270.9793;InbreedingCoeff=0.8691;MQ=80.66;MQ0=0;MQRankSum=-14.130;QD=87.35;ReadPosRankSum=2.844;VQSLOD=4.3766;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,7828	0/0:6,0:6:18.06:0,18,1278	0/0:24,0:24:69.20:0,69,4150	0/0:19,0:19:48.16:0,48,2499	0/0:10,0:10:30.09:0,30,1904	0/0:19,0:19:54.19:0,54,3708	0/0:33,0:33:96.33:0,96,7084	0/0:21,0:21:63.20:0,63,4106	0/0:34,0:34:99:0,99,6679	0/0:31,0:31:90.30:0,90,5977	0/0:6,0:6:18.06:0,18,960	1/1:8,18:26:51.17:2273,51,0	1/1:3,16:19:36.12:1587,36,0	1/1:6,25:31:69.24:2969,69,0	0/0:30,0:30:81.28:0,81,5566	0/0:31,0:31:90.31:0,90,6056	0/0:30,0:30:87.30:0,87,6166	0/0:33,0:33:99:0,99,6422	0/0:22,0:22:63.22:0,63,3919	0/0:11,0:11:27.09:0,27,1973	0/0:63,0:63:99:0,184,13016	1/1:0,10:10:27.09:1185,27,0	1/1:2,3:5:9.03:319,9,0	0/1:6,22:28:99:2062,0,173	0/0:8,0:8:24.08:0,24,1791	0/0:28,0:28:84.29:0,84,5845	0/0:16,0:16:48.16:0,48,3329	0/0:15,0:15:45.15:0,45,3325
chr10	106351425	.	GTT	G	793.96	PASS	AB=0.643;AC=11;AF=0.196;AN=56;BaseQRankSum=1.778;DP=615;FS=5.067;HRun=17;HaplotypeScore=84.6426;InbreedingCoeff=0.8684;MQ=68.24;MQ0=8;MQRankSum=-0.018;QD=6.51;ReadPosRankSum=0.803;VQSLOD=0.1372;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:42:80.89:0,81,877	0/1:4,3:9:6.45:37,0,6	0/0:36,0:18:16.35:0,16,73	0/0:28,0:17:21.99:0,22,147	0/0:17,0:26:60.85:0,61,587	0/0:21,0:21:55.07:0,55,537	0/0:17,0:20:45.18:0,45,343	1/1:11,12:27:25.25:253,25,0	0/0:16,0:16:28.67:0,29,260	0/0:25,0:27:52.84:0,53,574	0/0:9,1:11:4.02:0,4,193	0/0:18,0:19:38.63:0,39,364	0/0:16,0:16:20.04:0,20,251	0/0:13,0:13:26.66:0,27,270	0/0:14,0:14:19.42:0,19,174	0/0:21,0:22:49.93:0,50,494	0/0:36,0:38:67.84:0,68,740	0/0:21,0:23:42.98:0,43,378	1/1:17,3:23:23.19:203,23,0	1/1:7,13:22:28.83:221,29,0	1/1:9,3:16:19.74:117,20,0	0/0:13,0:16:22.92:0,23,240	0/0:25,0:28:47.72:0,48,511	0/0:16,0:17:35.39:0,35,367	0/0:15,0:21:28.30:0,28,369	0/0:16,0:18:27.13:0,27,250	1/1:9,15:24:18.94:139,19,0	0/0:13,0:10:20.06:0,20,179
chr10	106352143	.	A	AG	534.57	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.581;DP=706;FS=3.775;HRun=1;HaplotypeScore=66.4146;InbreedingCoeff=0.9993;MQ=88.21;MQ0=0;MQRankSum=-2.963;QD=38.18;ReadPosRankSum=2.181;VQSLOD=4.3765;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,1714	1/1:0,14:14:42.14:629,42,0	0/0:26,0:26:69.18:0,69,864	0/0:24,0:24:66.20:0,66,825	0/0:22,0:22:63.20:0,63,818	0/0:23,0:23:69.21:0,69,882	0/0:20,0:20:57.19:0,57,740	0/0:40,0:40:99:0,111,1430	0/0:26,0:26:75.23:0,75,960	0/0:26,0:26:75.24:0,75,972	0/0:19,0:19:54.18:0,54,700	0/0:30,0:30:84.26:0,84,1077	0/0:22,0:22:63.20:0,63,818	0/0:27,0:27:78.24:0,78,998	0/0:30,0:30:90.28:0,90,1154	0/0:29,0:29:84.27:0,84,1091	0/0:34,0:34:96.31:0,96,1246	0/0:24,0:24:66.19:0,66,840	0/0:16,0:16:48.14:0,48,608	0/0:24,0:24:72.23:0,72,934	0/0:37,0:37:99:0,111,1425	0/0:22,0:22:60.19:0,60,779	0/0:22,0:22:66.19:0,66,829	0/0:28,0:28:81.26:0,81,1051	0/0:12,0:12:36.12:0,36,468	0/0:34,0:34:99:0,99,1274	0/0:21,0:21:63.20:0,63,818	0/0:10,0:10:30.10:0,30,389
chr10	106352372	.	C	CG	722.54	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.615;DP=714;FS=0.879;HRun=2;HaplotypeScore=70.9993;InbreedingCoeff=0.9843;MQ=85.68;MQ0=0;MQRankSum=-2.793;QD=34.41;ReadPosRankSum=-0.454;VQSLOD=3.6567;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,123,1509	1/1:1,20:21:57.19:817,57,0	0/0:23,0:23:59.63:0,60,666	0/0:24,0:24:69.13:0,69,787	0/0:16,0:16:42.12:0,42,507	0/0:17,0:17:45.14:0,45,557	0/0:38,0:38:99:0,111,1375	0/0:39,0:39:96.23:0,96,1139	0/0:15,0:15:42.13:0,42,521	0/0:20,0:20:57.15:0,57,690	0/0:15,0:15:42.12:0,42,508	0/0:22,0:22:66.19:0,66,802	0/0:19,0:19:54.17:0,54,669	0/0:27,0:27:72.23:0,72,892	0/0:32,0:32:96.29:0,96,1177	0/0:21,0:21:60.19:0,60,744	0/0:36,0:36:96.27:0,96,1174	0/0:30,0:30:90.24:0,90,1098	0/0:26,0:26:69.22:0,69,853	0/0:26,0:26:75.22:0,75,916	0/0:64,0:64:99:0,166,2044	0/0:21,0:21:57.18:0,57,706	0/0:21,0:21:57.18:0,57,706	0/0:32,0:32:93.28:0,93,1138	0/0:22,0:22:63.20:0,63,780	0/0:24,0:24:69.21:0,69,850	0/0:13,0:13:39.10:0,39,456	0/0:5,0:5:15.05:0,15,186
chr10	106355962	.	ATAAATAAG	A	1602.72	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=1.070;DP=297;FS=6.079;HRun=0;HaplotypeScore=72.4774;InbreedingCoeff=0.6591;MQ=58.55;MQ0=2;MQRankSum=-2.740;QD=21.96;ReadPosRankSum=-0.429;VQSLOD=1.6106;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.04:0,54,1329	0/1:2,0:2:15.95:21,0,16	0/0:3,0:2:6.01:0,6,66	0/0:3,0:3:8.89:0,9,87	0/0:14,0:14:41.98:0,42,735	0/0:28,0:28:84.17:0,84,2733	0/0:10,0:10:24.01:0,24,369	1/1:33,0:32:89:780,89,0	0/0:7,0:7:21:0,21,246	0/0:10,0:10:30.06:0,30,496	0/0:7,0:7:21.01:0,21,397	0/0:4,0:4:12:0,12,202	0/0:7,0:7:21.01:0,21,496	0/0:4,0:4:11.94:0,12,92	0/0:12,0:12:36.04:0,36,799	0/0:1,0:1:3:0,3,25	0/0:22,0:22:66.03:0,66,1411	0/0:20,0:20:60.09:0,60,1613	1/1:4,21:23:58.77:658,59,0	1/1:0,3:3:8.96:126,9,0	./.	0/0:1,0:1:3:0,3,25	0/0:2,0:2:3.01:0,3,133	0/0:4,0:4:11.99:0,12,100	0/0:5,0:5:15:0,15,138	0/0:14,0:14:42.06:0,42,743	1/1:0,10:10:6:169,6,0	0/0:17,0:16:47.90:0,48,1102
chr10	106357066	.	C	CA	7553.69	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-15.064;DP=660;FS=0.330;HRun=0;HaplotypeScore=64.8176;InbreedingCoeff=0.9994;MQ=89.68;MQ0=0;MQRankSum=-3.957;QD=43.66;ReadPosRankSum=-2.267;VQSLOD=4.3394;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,1921	1/1:0,16:16:48.16:755,48,0	0/0:25,0:25:72.23:0,72,978	0/0:26,0:26:64.18:0,64,874	0/0:20,0:20:57.19:0,57,792	0/0:15,0:15:45.11:0,45,607	0/0:29,0:29:87.26:0,87,1190	1/1:0,22:22:63.15:910,63,0	0/0:15,0:15:45.15:0,45,626	0/0:26,0:26:78.22:0,78,1050	0/0:8,0:8:24.04:0,24,298	0/0:22,0:22:60.20:0,60,838	0/0:10,0:10:30.10:0,30,409	0/0:26,0:26:75.25:0,75,1047	0/0:17,0:17:48.16:0,48,671	0/0:20,0:20:60.20:0,60,838	0/0:28,0:28:84.28:0,84,1171	0/0:28,0:28:84.28:0,84,1174	1/1:1,44:45:99:2044,132,0	1/1:0,18:18:51.13:776,51,0	1/1:0,52:52:99:2158,135,0	0/0:23,0:23:69.23:0,69,962	0/0:17,0:17:45.15:0,45,628	0/0:35,0:35:99:0,99,1383	0/0:15,0:15:42.10:0,42,551	0/0:23,0:23:66.20:0,66,901	1/1:0,20:20:57.19:911,57,0	0/0:11,0:11:33.11:0,33,459
chr10	106358756	.	GACACACACACACACACAC	G	65.49	PASS	AB=0.800;AC=3;AF=0.060;AN=50;BaseQRankSum=1.582;DP=521;FS=0.000;HRun=0;HaplotypeScore=209.9063;InbreedingCoeff=0.2764;MQ=57.22;MQ0=11;MQRankSum=-1.711;QD=0.85;ReadPosRankSum=0.342;VQSLOD=2.2818;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:24.08:0,24,1260	0/0:7,0:7:9.03:0,9,251	./.	./.	0/0:9,0:9:6.02:0,6,397	0/0:13,0:13:15.52:0,16,1055	0/0:26,0:27:35.99:0,36,1134	0/0:11,0:11:0:0,0,0	0/0:23,0:23:24.54:0,25,1353	0/0:24,0:24:30.10:0,30,2216	0/0:9,0:9:6.02:0,6,264	0/0:14,0:14:6.02:0,6,441	0/0:11,0:12:21.07:0,21,1347	0/0:21,0:21:19.42:0,19,1015	0/0:21,0:22:36.10:0,36,2222	0/0:20,0:20:30.10:0,30,1696	0/0:24,0:25:33.09:0,33,2185	0/0:20,0:20:37.01:0,37,2446	0/0:12,0:12:1.25:0,1,3	./.	1/1:48,12:59:0.13:0,0,0	0/0:9,0:9:3.01:0,3,253	0/0:4,0:5:9.03:0,9,413	0/0:34,0:35:60.19:0,60,4065	0/0:19,0:19:27.08:0,27,1499	0/0:18,0:16:24.97:0,25,1580	0/1:12,4:16:99:139,0,124	0/0:5,0:4:12.04:0,12,823
chr10	106362874	.	C	CAA	1454.47	PASS	AB=0.958;AC=15;AF=0.268;AN=56;BaseQRankSum=4.651;DP=667;FS=0.852;HRun=14;HaplotypeScore=100.0258;InbreedingCoeff=0.4702;MQ=70.96;MQ0=16;MQRankSum=-2.744;QD=5.59;ReadPosRankSum=-2.901;VQSLOD=-0.0413;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:31.90:0,32,331	0/1:3,0:9:1.42:1,0,33	0/1:48,0:23:6.18:23,0,6	0/1:35,0:16:6.16:6,0,43	0/0:23,1:30:2.12:0,2,338	0/0:15,0:18:0.84:0,1,210	0/0:16,0:16:22.59:0,23,217	1/1:20,2:24:35.71:288,36,0	0/0:17,0:17:22.18:0,22,199	0/0:31,0:32:44.67:0,45,357	0/0:20,0:25:36.20:0,36,368	0/0:22,0:22:35.09:0,35,271	0/0:20,0:21:4.51:0,5,176	0/0:25,0:26:24.61:0,25,246	0/0:18,0:21:14.33:0,14,219	0/0:20,0:22:6.09:0,6,338	0/0:31,0:36:16.74:0,17,476	0/0:22,0:25:29.66:0,30,351	1/1:27,3:28:55.29:485,55,0	1/1:9,15:25:24.09:404,24,0	1/1:6,4:11:5.38:48,5,0	0/0:17,0:20:13.38:0,13,223	0/1:14,1:20:50.95:51,0,150	0/0:17,0:19:37.43:0,37,292	0/1:17,0:23:0.59:1,0,172	0/0:27,0:28:3.44:0,3,242	1/1:9,18:32:28.75:316,29,0	0/0:3,0:3:2.15:0,2,26
chr10	106363446	.	A	AAAAAG	4299.67	PASS	AB=0.955;AC=11;AF=0.196;AN=56;BaseQRankSum=-8.315;DP=542;FS=20.934;HRun=0;HaplotypeScore=104.2979;InbreedingCoeff=0.9151;MQ=65.79;MQ0=2;MQRankSum=-4.346;QD=38.05;ReadPosRankSum=-2.842;VQSLOD=2.8089;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:84.21:0,84,1446	0/0:6,0:6:15.04:0,15,245	0/0:25,0:18:34.52:0,35,419	0/1:20,0:14:1.65:2,0,147	0/0:34,0:34:78.26:0,78,1363	0/0:11,0:11:24.08:0,24,441	0/0:20,0:20:38.94:0,39,602	1/1:6,14:20:42.13:1024,42,0	0/0:18,0:18:48.16:0,48,852	0/0:26,0:25:54.18:0,54,953	0/0:15,0:15:27.08:0,27,443	0/0:21,0:21:42.13:0,42,714	0/0:13,0:13:21.07:0,21,366	0/0:17,0:17:39.09:0,39,657	0/0:16,0:16:45.12:0,45,714	0/0:17,0:17:42.14:0,42,752	0/0:31,0:31:75.19:0,75,1214	0/0:33,0:33:58.05:0,58,983	1/1:9,12:21:42.13:946,42,0	1/1:3,14:18:41.14:816,41,0	1/1:1,7:8:12.04:337,12,0	0/0:8,0:8:15.05:0,15,256	0/0:12,0:12:30.05:0,30,387	0/0:11,0:11:30.09:0,30,503	0/0:23,0:23:54.12:0,54,825	0/0:24,0:24:60.17:0,60,1024	1/1:4,18:22:42.14:1175,42,0	0/0:15,0:15:39.09:0,39,681
chr10	106365736	.	AGT	A	71.46	PASS	AB=0.941;AC=15;AF=0.326;AN=46;BaseQRankSum=3.482;DP=669;FS=5.942;HRun=0;HaplotypeScore=91.9697;InbreedingCoeff=-0.0796;MQ=68.36;MQ0=14;MQRankSum=-0.540;QD=0.22;ReadPosRankSum=0.155;VQSLOD=1.2086;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:30:1.96:2,0,115	1/1:3,0:3:2.84:14,3,0	./.	./.	0/0:22,0:22:5.90:0,6,67	0/0:21,0:21:6:0,6,68	0/0:29,0:29:9.02:0,9,113	./.	0/1:25,1:26:7.97:8,0,172	0/0:20,0:19:3.01:0,3,43	0/0:11,0:11:9:0,9,94	0/0:24,0:24:14.65:0,15,159	0/1:12,3:15:25.86:26,0,38	0/0:22,0:22:11.99:0,12,132	0/1:11,1:11:25.87:26,0,38	0/1:15,0:18:16.88:17,0,123	0/1:41,1:43:6.54:7,0,295	0/1:27,3:30:27.01:27,0,93	./.	./.	0/1:60,0:60:0:0,0,0	0/1:14,1:15:16.87:17,0,122	0/1:19,3:21:0:0,0,0	0/1:37,2:38:27.82:28,0,265	0/0:16,0:16:5.95:0,6,44	0/0:16,0:16:8.92:0,9,67	1/1:18,0:18:5.68:28,6,0	0/0:11,0:10:7.55:0,8,67
chr10	106365773	.	GTGTGTGTGTGTGTGTA	G	1201.11	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.595;DP=620;FS=27.080;HRun=0;HaplotypeScore=212.7890;InbreedingCoeff=0.8956;MQ=55.55;MQ0=21;MQRankSum=-3.196;QD=10.44;ReadPosRankSum=-3.382;VQSLOD=0.8345;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:58.71:0,59,2560	1/1:7,0:7:11.61:183,12,0	0/0:17,0:6:17.02:0,17,153	0/0:16,0:8:11.11:0,11,188	0/0:15,0:15:35.75:0,36,1567	0/0:22,0:22:48:0,48,1672	0/0:41,0:39:92.99:0,93,2880	1/1:17,0:15:36.18:336,36,0	0/0:30,0:30:73.76:0,74,2984	0/0:20,0:19:53.16:0,53,1786	0/0:10,0:10:30.07:0,30,1280	0/0:27,0:27:63.17:0,63,2995	0/0:17,0:17:39.53:0,40,1305	0/0:30,0:29:63.12:0,63,2738	0/0:19,0:18:41.86:0,42,1466	0/0:23,0:23:54.13:0,54,2401	0/0:40,0:40:99:0,104,4530	0/0:29,0:27:72.16:0,72,2654	1/1:15,0:13:30.77:266,31,0	1/1:7,6:10:0.47:1,0,0	1/1:11,40:49:2.54:116,3,0	0/0:15,0:15:30.07:0,30,1519	0/0:16,0:15:27.06:0,27,1116	0/0:42,0:42:90.18:0,90,3906	0/0:14,0:13:30.02:0,30,1027	0/0:21,0:21:58.65:0,59,1705	1/1:10,2:12:23.98:463,24,0	0/0:4,0:4:12.04:0,12,636
chr10	106366380	.	G	GT	3183.59	PASS	AB=0.981;AC=47;AF=0.839;AN=56;BaseQRankSum=7.489;DP=261;FS=81.054;HRun=0;HaplotypeScore=168.5854;InbreedingCoeff=-0.2038;MQ=62.63;MQ0=0;MQRankSum=-5.494;QD=12.20;ReadPosRankSum=8.321;VQSLOD=0.8616;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:5:4.54:43,0,5	1/1:3,0:3:8.76:51,9,0	0/1:18,0:18:99:102,0,104	0/1:9,0:9:27.22:75,0,27	1/1:11,1:12:27.66:180,28,0	1/1:6,1:7:20.75:161,21,0	1/1:12,1:13:32.30:226,32,0	1/1:18,1:19:24.05:342,24,0	0/1:9,1:10:9.35:85,0,9	1/1:11,0:11:19.70:194,20,0	1/1:4,0:4:8.41:49,8,0	1/1:10,0:10:9.02:129,9,0	1/1:6,0:6:13.21:86,13,0	1/1:9,0:9:9.88:123,10,0	0/1:9,0:9:35.31:35,0,42	0/1:10,1:11:22.09:116,0,22	1/1:15,1:15:13.03:168,13,0	1/1:10,0:10:17.74:115,18,0	1/1:12,0:12:2.46:159,2,0	1/1:7,0:7:3.71:87,4,0	0/1:9,0:9:40.99:58,0,41	1/1:9,0:9:2.45:105,2,0	1/1:8,1:9:20.73:157,21,0	1/1:8,0:8:14.97:107,15,0	1/1:11,0:11:30.11:175,30,0	1/1:7,2:9:10.54:169,11,0	0/1:3,0:3:7.17:14,0,7	0/1:2,0:2:11.09:13,0,11
chr10	106366392	.	T	TC	7853.53	PASS	AB=0.778;AC=53;AF=0.946;AN=56;BaseQRankSum=0.658;DP=218;FS=30.642;HRun=1;HaplotypeScore=158.5796;InbreedingCoeff=0.3127;MQ=54.23;MQ0=0;MQRankSum=-3.709;QD=36.36;ReadPosRankSum=2.867;VQSLOD=2.1500;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,5:6:15.05:224,15,0	1/1:1,3:4:12.04:179,12,0	0/1:5,2:7:71.31:95,0,71	0/0:2,0:2:3.46:0,3,25	1/1:2,8:10:21.07:314,21,0	1/1:0,8:8:24.08:359,24,0	1/1:1,13:14:39.13:583,39,0	1/1:9,10:19:54.14:752,54,0	1/1:0,7:7:21.07:314,21,0	1/1:2,8:10:25.08:386,25,0	1/1:1,5:5:12.04:179,12,0	1/1:3,8:11:27.05:379,27,0	1/1:1,4:5:15:198,15,0	1/1:2,4:6:15.05:216,15,0	1/1:0,4:4:12.04:179,12,0	1/1:0,8:8:24.08:358,24,0	1/1:1,13:13:30.10:449,30,0	1/1:2,5:7:17.89:264,18,0	1/1:3,8:11:30.06:417,30,0	1/1:0,5:5:15.05:224,15,0	1/1:1,5:6:3.01:45,3,0	1/1:1,5:6:15.05:224,15,0	1/1:1,7:8:21.07:314,21,0	1/1:1,8:9:18.06:269,18,0	1/1:3,6:9:18.02:244,18,0	1/1:2,9:11:33.07:463,33,0	1/1:0,4:4:12.04:180,12,0	1/1:0,1:1:3.01:45,3,0
chr10	106366411	.	A	AT	5030.41	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=2.208;DP=170;FS=38.681;HRun=2;HaplotypeScore=137.9586;InbreedingCoeff=0.4726;MQ=43.84;MQ0=2;MQRankSum=-0.030;QD=31.24;ReadPosRankSum=2.046;VQSLOD=1.9612;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:15.05:216,15,0	1/1:0,4:4:9.03:122,9,0	0/0:5,0:2:3.01:0,3,37	0/0:2,0:2:2.92:0,3,17	1/1:0,6:6:9.03:129,9,0	1/1:0,7:7:21.07:302,21,0	1/1:1,8:9:24.08:345,24,0	1/1:4,4:7:12.04:173,12,0	1/1:1,5:6:12.04:172,12,0	1/1:2,9:11:27.05:364,27,0	1/1:0,4:3:9.03:129,9,0	1/1:0,9:9:24.08:345,24,0	1/1:0,4:4:12.04:172,12,0	1/1:1,4:5:15.01:192,15,0	1/1:3,3:6:14.97:170,15,0	1/1:2,8:10:27.06:366,27,0	1/1:3,8:10:21.07:302,21,0	1/1:1,3:4:6.02:86,6,0	1/1:3,3:5:6.02:86,6,0	1/1:0,5:5:6.02:86,6,0	./.	1/1:0,5:5:12.04:172,12,0	1/1:0,7:7:12.04:172,12,0	1/1:1,6:7:9.03:129,9,0	1/1:0,7:7:15.01:192,15,0	1/1:1,8:9:24.08:345,24,0	1/1:0,4:4:12.04:173,12,0	1/1:0,2:2:6.02:86,6,0
chr10	106366421	.	T	TG	5103.91	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=2.260;DP=155;FS=38.316;HRun=1;HaplotypeScore=126.0916;InbreedingCoeff=0.4606;MQ=34.17;MQ0=8;MQRankSum=-0.032;QD=34.96;ReadPosRankSum=0.957;VQSLOD=1.9792;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:15.05:224,15,0	1/1:0,3:3:9.03:135,9,0	0/0:5,0:1:3:0,3,29	0/0:3,0:1:3.01:0,3,39	1/1:3,5:7:12:154,12,0	1/1:0,7:7:21.07:314,21,0	1/1:0,6:6:18.06:269,18,0	1/1:4,3:6:9.03:135,9,0	1/1:2,3:4:9.03:135,9,0	1/1:3,7:10:21.07:315,21,0	1/1:1,4:3:9.03:134,9,0	1/1:0,8:8:24.08:359,24,0	1/1:0,5:5:15.05:224,15,0	1/1:0,5:5:15.05:224,15,0	1/1:0,6:6:18.02:244,18,0	1/1:1,8:9:24.08:359,24,0	1/1:0,8:8:21.07:314,21,0	1/1:0,3:3:6.02:90,6,0	1/1:2,2:2:6.02:90,6,0	1/1:1,3:4:6.02:90,6,0	./.	1/1:2,4:6:12.04:180,12,0	1/1:0,6:6:12.04:179,12,0	1/1:1,4:5:6.02:90,6,0	1/1:1,5:6:15.05:221,15,0	1/1:0,8:8:24.08:357,24,0	1/1:1,4:4:12.04:180,12,0	1/1:0,2:2:6.02:90,6,0
chr10	106366462	.	TC	T	1688.87	PASS	AC=40;AF=0.909;AN=44;BaseQRankSum=1.859;DP=94;FS=24.094;HRun=5;HaplotypeScore=66.2985;InbreedingCoeff=0.3324;MQ=53.25;MQ0=5;MQRankSum=-3.327;QD=22.22;ReadPosRankSum=1.484;VQSLOD=2.0199;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,3:3:3.01:34,3,0	0/0:4,0:1:3.01:0,3,41	0/0:4,0:3:9.01:0,9,95	1/1:1,5:5:9.03:102,9,0	1/1:1,2:3:3.01:34,3,0	1/1:1,1:2:3.01:34,3,0	1/1:1,1:2:3.01:34,3,0	./.	1/1:1,4:5:12.03:136,12,0	1/1:2,4:5:9.03:102,9,0	1/1:0,4:4:9.03:102,9,0	1/1:0,3:3:9.03:102,9,0	1/1:1,1:2:3.01:34,3,0	1/1:0,5:5:15.04:170,15,0	1/1:1,5:6:15.04:170,15,0	./.	./.	1/1:2,3:4:9.02:102,9,0	1/1:2,2:4:9.02:97,9,0	./.	1/1:0,1:1:3.01:34,3,0	1/1:0,2:2:6.02:68,6,0	./.	1/1:1,3:4:9.03:102,9,0	1/1:1,5:6:15.04:170,15,0	1/1:1,4:5:12.03:136,12,0	1/1:1,1:1:3.01:34,3,0
chr10	106367658	.	T	TA	1177.20	PASS	AB=0.820;AC=13;AF=0.232;AN=56;BaseQRankSum=-6.064;DP=434;FS=0.000;HRun=11;HaplotypeScore=49.3688;InbreedingCoeff=0.6966;MQ=68.25;MQ0=14;MQRankSum=-0.288;QD=9.73;ReadPosRankSum=-4.477;VQSLOD=1.0786;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,2:27:7.39:7,0,286	0/1:2,4:6:11.21:79,0,11	0/0:14,0:10:13.22:0,13,83	0/0:6,0:5:2.59:0,3,10	0/0:23,0:22:38.80:0,39,302	0/0:16,0:16:35.35:0,35,265	0/0:15,0:15:38.82:0,39,302	1/1:8,17:25:42.04:409,42,0	0/0:16,0:16:41.82:0,42,323	0/0:27,0:26:31.22:0,31,331	0/0:14,0:11:23.90:0,24,186	0/0:9,0:9:13.24:0,13,152	0/1:12,1:12:0.60:1,0,175	0/0:13,0:12:32.84:0,33,250	0/0:8,0:8:17.92:0,18,139	0/0:18,0:18:8.13:0,8,207	0/0:25,0:24:43.30:0,43,317	0/0:22,0:22:59.73:0,60,461	1/1:5,12:17:12.77:293,13,0	1/1:2,7:7:18:172,18,0	1/1:5,11:14:24.04:238,24,0	0/0:14,0:15:29.76:0,30,226	0/0:14,0:14:24.74:0,25,200	0/0:16,0:15:23.84:0,24,186	0/0:13,0:12:23.88:0,24,185	0/0:15,0:14:13.83:0,14,199	1/1:2,6:7:15.03:152,15,0	0/0:12,0:11:32.87:0,33,255
chr10	106368328	.	G	GGCAGT	9193.16	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.260;DP=671;FS=5.421;HRun=0;HaplotypeScore=127.2857;InbreedingCoeff=0.9981;MQ=81.02;MQ0=0;MQRankSum=-13.599;QD=65.20;ReadPosRankSum=-4.759;VQSLOD=4.1387;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,2371	1/1:7,7:14:33.11:942,33,0	0/0:21,0:21:60.18:0,60,1178	0/0:17,0:17:51.17:0,51,1050	0/0:12,0:12:36.11:0,36,741	0/0:27,0:27:78.25:0,78,1651	0/0:33,0:33:87.30:0,87,1848	1/1:18,16:38:99:2927,108,0	0/0:18,0:18:54.19:0,54,1164	0/0:36,0:36:99:0,102,2120	0/0:7,0:7:21.07:0,21,448	0/0:28,0:28:81.28:0,81,1713	0/0:22,0:22:63.20:0,63,1295	0/0:37,0:37:99:0,111,2369	0/0:37,0:37:99:0,111,2349	0/0:22,0:22:63.20:0,63,1283	0/0:32,0:32:96.30:0,96,2001	0/0:21,0:21:63.22:0,63,1360	1/1:6,11:18:48.12:1217,48,0	1/1:4,16:22:45.15:1359,45,0	1/1:9,16:28:39.13:1229,39,0	0/0:30,0:30:87.30:0,87,1889	0/0:7,0:7:21.07:0,21,440	0/0:27,0:27:78.21:0,78,1591	0/0:18,0:18:54.16:0,54,1115	0/0:31,0:31:93.31:0,93,1955	1/1:2,18:21:48.16:1519,48,0	0/0:9,0:9:27.08:0,27,506
chr10	106371347	.	A	AAG	601.73	PASS	AB=0.877;AC=7;AF=0.125;AN=56;BaseQRankSum=0.852;DP=570;FS=13.547;HRun=0;HaplotypeScore=77.2430;InbreedingCoeff=0.3588;MQ=50.25;MQ0=52;MQRankSum=-0.310;QD=6.40;ReadPosRankSum=0.791;VQSLOD=2.0192;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:35:73.31:0,73,559	0/1:9,0:8:13.07:118,0,13	0/0:31,0:4:0.83:0,1,11	0/0:33,0:9:1.78:0,2,35	0/0:21,0:19:32.81:0,33,244	0/0:24,0:24:46.62:0,47,361	0/0:17,0:16:32.51:0,33,225	0/1:15,19:34:63.47:302,0,63	0/0:15,0:14:34.32:0,34,251	0/0:25,0:20:53.80:0,54,393	0/0:12,0:10:24.64:0,25,181	0/0:17,0:14:30.93:0,31,229	0/0:18,0:18:36.20:0,36,280	0/0:15,0:13:26.89:0,27,179	0/0:16,0:15:29.83:0,30,237	0/0:15,0:14:27.58:0,28,240	0/0:32,0:26:43.74:0,44,346	0/0:30,0:24:43.11:0,43,316	0/1:14,0:8:12.80:50,0,13	0/0:12,0:12:4.66:0,5,31	1/1:13,0:10:6.10:85,6,0	0/0:4,0:3:8.99:0,9,79	0/0:8,0:6:6.68:0,7,50	0/0:30,0:25:21.77:0,22,152	0/0:21,0:19:53.41:0,53,322	0/0:31,0:27:76.84:0,77,546	1/1:22,0:19:14.63:178,15,0	0/0:9,0:6:12.42:0,12,78
chr10	106371519	.	G	GA	286.22	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.142;DP=655;FS=0.000;HRun=8;HaplotypeScore=75.7984;InbreedingCoeff=0.9919;MQ=68.61;MQ0=1;MQRankSum=-0.578;QD=19.08;ReadPosRankSum=-0.277;VQSLOD=3.2402;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,1:42:82.44:0,82,1008	1/1:3,12:15:33.10:381,33,0	0/0:16,0:15:33.21:0,33,270	0/0:26,0:25:52.45:0,52,432	0/0:14,0:14:36.01:0,36,329	0/0:22,0:22:54.03:0,54,494	0/0:30,0:30:78.02:0,78,709	0/0:32,0:32:75:0,75,677	0/0:23,0:23:69.04:0,69,630	0/0:18,0:18:54.01:0,54,487	0/0:14,0:14:33.01:0,33,302	0/0:22,0:22:57:0,57,515	0/0:26,0:26:62.89:0,63,576	0/0:32,0:32:90.04:0,90,822	0/0:22,0:22:57.02:0,57,521	0/0:29,0:29:84:0,84,760	0/0:29,0:29:84.02:0,84,761	0/0:29,0:27:47.22:0,47,558	0/0:26,0:25:54.01:0,54,494	0/0:8,0:8:21.01:0,21,192	0/0:36,0:35:90.04:0,90,822	0/0:13,0:13:39.02:0,39,357	0/0:11,0:11:27.01:0,27,247	0/0:35,0:35:93.03:0,93,845	0/0:22,0:22:57.03:0,57,521	0/0:28,0:28:72.02:0,72,655	0/0:23,0:23:57.01:0,57,516	0/0:11,0:11:23.99:0,24,220
chr10	106372344	.	AGGTGGAAGCG	A	1933.21	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=6.403;DP=462;FS=0.000;HRun=0;HaplotypeScore=138.7877;InbreedingCoeff=0.8886;MQ=84.81;MQ0=3;MQRankSum=-6.785;QD=69.04;ReadPosRankSum=1.027;VQSLOD=3.5702;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.22:0,69,3122	0/0:2,0:2:6.02:0,6,106	0/0:34,0:24:69.23:0,69,2710	0/0:37,0:29:81.28:0,81,3551	0/0:15,0:15:45.12:0,45,1890	0/0:14,0:14:38.90:0,39,1736	0/0:20,0:20:60.21:0,60,3009	1/1:0,10:10:30.10:980,30,0	0/0:21,0:21:63.22:0,63,3068	0/0:13,0:13:39.13:0,39,1857	0/0:6,0:6:18.06:0,18,874	0/0:15,0:15:42.14:0,42,2173	0/0:17,0:17:51.18:0,51,2552	0/0:16,0:16:48.16:0,48,2349	0/0:17,0:17:48.16:0,48,2317	0/0:16,0:16:48.14:0,48,2187	0/0:32,0:32:96.30:0,96,4582	0/0:18,0:17:51.18:0,51,2477	1/1:0,6:6:15.05:475,15,0	./.	0/0:2,17:19:0.47:0,0,1	0/0:16,0:16:48.16:0,48,2251	0/0:13,0:13:39.13:0,39,1892	0/0:28,0:29:78.21:0,78,3932	0/0:11,0:11:33.11:0,33,1725	0/0:15,0:15:45.15:0,45,2179	1/1:0,12:12:18.06:615,18,0	0/0:3,0:3:9.03:0,9,479
chr10	106372354	.	GCA	G	243.68	PASS	AB=0.959;AC=17;AF=0.425;AN=40;BaseQRankSum=2.156;DP=506;FS=3.812;HRun=0;HaplotypeScore=79.9084;InbreedingCoeff=-0.2930;MQ=65.95;MQ0=13;MQRankSum=0.360;QD=0.84;ReadPosRankSum=0.020;VQSLOD=1.2514;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:27:8.60:9,0,80	1/1:3,0:3:0.47:1,0,0	./.	./.	1/1:14,0:14:2.98:23,3,0	0/0:14,0:14:3.01:0,3,43	0/1:30,0:30:7.41:7,0,94	./.	1/1:17,0:21:11.15:56,11,0	0/1:13,0:13:24.59:25,0,37	./.	0/1:16,4:19:22.38:22,0,66	0/0:23,0:23:11.28:0,11,69	0/0:15,0:14:2.98:0,3,21	0/1:19,0:19:18.10:18,0,37	0/1:15,2:17:50.79:51,0,56	0/1:35,3:36:37.87:38,0,217	0/1:20,1:20:50.87:51,0,76	./.	./.	./.	0/0:17,0:17:1.01:0,1,75	0/1:16,0:15:18.92:24,0,19	0/1:35,1:36:39.85:40,0,44	0/1:13,0:13:2.16:2,0,77	0/0:19,0:19:5.97:0,6,48	./.	0/0:5,0:5:9.01:0,9,109
chr10	106372393	.	CACACACACACACACACACAT	C	74.97	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.641;DP=585;FS=0.000;HRun=0;HaplotypeScore=244.5106;InbreedingCoeff=0.6351;MQ=52.62;MQ0=24;MQRankSum=-0.228;QD=18.74;ReadPosRankSum=-2.027;VQSLOD=1.7589;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:78.13:0,78,3723	1/1:0,4:4:3.48:153,3,0	0/0:18,0:11:12.97:0,13,192	0/0:27,0:10:23.17:0,23,279	0/0:13,0:13:30.04:0,30,1290	0/0:19,0:18:36.51:0,37,1424	0/0:34,0:33:69.13:0,69,3192	0/0:14,0:13:35.67:0,36,265	0/0:18,0:18:38.12:0,38,1754	0/0:26,0:24:70.33:0,70,3233	0/0:7,0:7:14.57:0,15,327	0/0:23,0:19:45.02:0,45,1994	0/0:32,0:32:77.17:0,77,3805	0/0:17,0:15:39.08:0,39,1440	0/0:27,0:27:62.50:0,63,2978	0/0:19,0:19:48.59:0,49,2924	0/0:55,0:52:99:0,132,6612	0/0:26,0:26:66.77:0,67,3449	0/0:9,0:9:26.83:0,27,202	0/0:6,0:5:3:0,3,25	0/0:24,0:20:20.43:0,20,154	0/0:22,0:21:45.08:0,45,2306	0/0:15,0:14:29.94:0,30,1327	0/0:37,0:37:90.07:0,90,4586	0/0:13,0:13:33.05:0,33,1615	0/0:24,0:23:67.08:0,67,2586	0/0:13,0:13:29.74:0,30,218	0/0:9,0:8:24.08:0,24,1635
chr10	106373001	.	A	AAAT	2205.53	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.042;DP=412;FS=0.000;HRun=0;HaplotypeScore=63.9947;InbreedingCoeff=0.8788;MQ=62.07;MQ0=4;MQRankSum=-4.879;QD=32.92;ReadPosRankSum=-2.177;VQSLOD=3.3323;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:54.18:0,54,864	0/0:2,0:2:2.98:0,3,21	0/0:16,0:12:23.83:0,24,280	0/0:25,0:9:15.29:0,15,165	0/0:20,0:20:54.17:0,54,823	0/0:18,0:18:51.17:0,51,798	0/0:9,0:9:27.09:0,27,430	1/1:5,15:22:53.34:796,53,0	0/0:9,0:9:24.08:0,24,381	0/0:19,0:19:54.16:0,54,802	0/0:16,0:16:48.10:0,48,717	0/0:10,0:10:27.06:0,27,365	0/0:6,0:6:15.04:0,15,221	0/0:14,0:14:39.12:0,39,599	0/0:12,0:12:33.10:0,33,502	0/0:12,0:12:27.09:0,27,432	0/0:22,0:22:60.20:0,60,959	0/0:30,0:30:85.17:0,85,1345	1/1:0,10:9:27.02:444,27,0	1/1:5,13:18:32.49:689,32,0	1/1:0,2:2:3.01:66,3,0	0/0:6,0:6:12.04:0,12,189	0/0:8,0:8:24.08:0,24,380	0/0:3,0:3:6.02:0,6,96	0/0:27,0:27:78.27:0,78,1242	0/0:26,0:26:69.23:0,69,1083	1/1:3,10:14:18.06:376,18,0	0/0:12,0:12:33.11:0,33,528
chr10	106374693	.	GA	G	862.30	PASS	AB=0.949;AC=10;AF=0.179;AN=56;BaseQRankSum=5.962;DP=553;FS=0.587;HRun=16;HaplotypeScore=68.1646;InbreedingCoeff=0.6843;MQ=55.52;MQ0=20;MQRankSum=0.257;QD=6.44;ReadPosRankSum=-1.243;VQSLOD=2.3093;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:96.69:0,97,1055	0/0:4,0:4:11.47:0,11,96	0/1:50,1:6:26.36:26,0,52	0/0:69,0:16:5.69:0,6,107	0/0:12,0:12:22.18:0,22,198	0/0:21,0:20:47.90:0,48,493	0/0:22,0:22:62.92:0,63,678	1/1:21,7:26:30.47:422,30,0	0/0:13,0:13:31.25:0,31,317	0/0:14,0:14:30.02:0,30,309	0/0:7,0:7:9.50:0,9,103	0/0:12,0:12:24.82:0,25,223	0/0:14,0:15:18.83:0,19,245	0/0:18,0:18:30.50:0,31,312	0/0:14,0:14:33.03:0,33,356	0/0:9,0:9:26.94:0,27,268	0/0:34,0:34:77.44:0,77,790	0/0:34,0:32:78.93:0,79,826	1/1:26,6:28:29.51:296,30,0	1/1:3,3:6:11.98:108,12,0	1/1:1,5:6:9:82,9,0	0/0:12,0:11:15.02:0,15,154	0/0:9,0:9:15.52:0,16,173	0/0:15,0:16:24.29:0,24,334	0/0:12,0:11:23.58:0,24,215	0/0:18,0:18:27.54:0,28,304	0/1:10,1:11:23.66:90,0,24	0/0:10,0:9:18:0,18,171
chr10	106375797	.	AGTGTGTGTGTGTGT	A	2405.71	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.494;DP=670;FS=9.700;HRun=0;HaplotypeScore=231.9618;InbreedingCoeff=0.8833;MQ=67.61;MQ0=13;MQRankSum=-6.145;QD=17.06;ReadPosRankSum=-2.034;VQSLOD=1.1722;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:63.22:0,63,3530	1/1:3,0:8:12.04:391,12,0	0/0:41,0:15:3.01:0,3,30	0/0:45,0:20:18.90:0,19,363	0/0:11,0:11:18.06:0,18,1029	0/0:16,0:20:42.13:0,42,2235	0/0:28,0:31:56.47:0,56,2659	1/1:19,11:30:21.18:341,21,0	0/0:16,0:18:51.11:0,51,2749	0/0:14,0:14:39.12:0,39,2089	0/0:4,0:5:9:0,9,230	0/0:29,0:33:72.19:0,72,3451	0/0:19,0:19:33.54:0,34,1713	0/0:25,0:30:60.21:0,60,3464	0/0:21,0:22:43.01:0,43,2362	0/0:26,0:28:70.98:0,71,3671	0/0:28,0:31:77.05:0,77,4222	0/0:22,0:22:51.12:0,51,2798	1/1:5,12:16:33.06:991,33,0	1/1:3,3:6:9.03:256,9,0	1/1:32,29:62:1.81:54,2,0	0/0:12,0:11:21.07:0,21,1183	0/0:14,0:16:30.57:0,31,1755	0/0:43,0:47:99:0,113,6286	0/0:15,0:17:33.57:0,34,1650	0/0:17,0:22:51.16:0,51,2557	1/1:6,11:18:15.05:544,15,0	0/0:8,0:10:24.08:0,24,1302
chr10	106376823	.	TTCTC	T	422.20	PASS	AB=0.945;AC=17;AF=0.354;AN=48;BaseQRankSum=4.477;DP=584;FS=4.918;HRun=0;HaplotypeScore=114.8859;InbreedingCoeff=0.1835;MQ=55.91;MQ0=12;MQRankSum=-0.586;QD=1.52;ReadPosRankSum=-0.152;VQSLOD=2.0969;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:35:43.39:0,43,776	0/0:12,0:12:6.89:0,7,49	./.	./.	0/0:7,0:7:5.81:0,6,84	1/1:13,4:17:6.02:93,6,0	1/1:13,6:22:11.89:165,12,0	./.	0/1:20,0:20:19.60:20,0,229	0/0:17,0:17:21.07:0,21,382	0/0:11,0:11:2.80:0,3,25	0/0:26,0:26:14.42:0,14,179	0/1:16,0:17:21.01:21,0,184	0/1:31,0:36:6.85:7,0,263	0/1:17,2:18:28.46:28,0,217	0/1:20,1:22:26.71:27,0,215	0/1:32,0:33:5.13:5,0,566	0/0:26,0:25:26.98:0,27,451	1/1:10,0:10:2.90:16,3,0	0/0:16,0:16:5.74:0,6,38	0/1:40,0:38:14.76:55,0,15	0/0:11,0:11:12.03:0,12,191	0/0:7,0:8:5.65:0,6,29	1/1:20,4:24:6.02:93,6,0	0/0:15,0:16:14.79:0,15,270	0/0:24,0:25:32.07:0,32,479	1/1:18,0:17:3.81:45,4,0	./.
chr10	106377050	.	C	CT	5599.85	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-9.005;DP=701;FS=3.548;HRun=3;HaplotypeScore=71.3182;InbreedingCoeff=0.9977;MQ=79.69;MQ0=0;MQRankSum=-1.627;QD=37.84;ReadPosRankSum=-2.188;VQSLOD=4.5028;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,150,1794	1/1:0,13:13:29.94:420,30,0	0/0:19,0:19:16.89:0,17,483	0/0:17,0:16:48:0,48,537	0/0:19,0:19:57.17:0,57,684	0/0:14,0:14:42.13:0,42,504	0/0:38,0:38:99:0,105,1235	1/1:0,31:31:90.29:1243,90,0	0/0:26,0:26:78.23:0,78,925	0/0:28,0:28:81.25:0,81,972	0/0:13,0:13:36.10:0,36,421	0/0:24,0:24:66.20:0,66,792	0/0:26,0:26:75.23:0,75,899	0/0:29,0:29:81.24:0,81,960	0/0:35,0:35:87.26:0,87,1044	0/0:34,0:34:93.28:0,93,1116	0/0:37,0:37:99:0,108,1295	0/0:29,0:29:87.24:0,87,1019	1/1:2,19:21:57.18:780,57,0	1/1:0,22:22:60.20:840,60,0	1/1:2,37:39:75.37:1476,75,0	0/0:15,0:15:42.13:0,42,504	0/0:16,0:16:45.14:0,45,540	0/0:26,0:26:78.22:0,78,923	0/0:14,0:14:42.13:0,42,504	0/0:29,0:29:78.24:0,78,936	1/1:0,22:22:60.20:840,60,0	0/0:11,0:11:33.10:0,33,395
chr10	106378108	.	ATAAAG	A	226.33	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.272;DP=493;FS=1.568;HRun=0;HaplotypeScore=90.2522;InbreedingCoeff=0.9520;MQ=55.58;MQ0=3;MQRankSum=-1.432;QD=37.72;ReadPosRankSum=0.768;VQSLOD=3.7173;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:50.93:0,51,1469	1/1:1,5:6:15.05:315,15,0	0/0:18,0:11:21.07:0,21,557	0/0:19,0:10:24.08:0,24,571	0/0:21,0:21:57.18:0,57,1620	0/0:18,0:18:51.17:0,51,1530	0/0:14,0:14:31.72:0,32,1021	0/0:31,0:31:84.28:0,84,2387	0/0:17,0:17:48.16:0,48,1452	0/0:21,0:21:57.20:0,57,1614	0/0:15,0:14:42.14:0,42,1302	0/0:17,0:17:41.98:0,42,1256	0/0:15,0:15:45.14:0,45,1309	0/0:15,0:15:39.13:0,39,1110	0/0:19,0:19:57.20:0,57,1637	0/0:20,0:20:48.16:0,48,1416	0/0:30,0:30:75.26:0,75,2168	0/0:17,0:17:45.15:0,45,1362	0/0:16,0:16:42.14:0,42,1156	0/0:18,0:17:39.13:0,39,989	0/0:9,0:9:15.04:0,15,295	0/0:8,0:7:18.06:0,18,499	0/0:16,0:16:36.11:0,36,882	0/0:12,0:12:30.10:0,30,779	0/0:30,0:30:81.26:0,81,2395	0/0:22,0:22:54.15:0,54,1426	0/0:19,0:19:57.16:0,57,1601	0/0:9,0:9:24.08:0,24,595
chr10	106378131	.	AAAAG	A	1542.35	PASS	AB=0.720;AC=13;AF=0.250;AN=52;BaseQRankSum=1.256;DP=446;FS=5.952;HRun=0;HaplotypeScore=79.4618;InbreedingCoeff=0.7725;MQ=55.00;MQ0=10;MQRankSum=2.022;QD=12.64;ReadPosRankSum=1.891;VQSLOD=2.4579;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,6:20:12.04:181,12,0	1/1:8,0:8:9.03:135,9,0	./.	./.	0/0:20,0:20:18.04:0,18,357	0/0:16,0:16:18.04:0,18,291	0/0:12,0:12:6.02:0,6,121	0/0:29,0:24:0:0,0,0	0/0:23,0:23:36.11:0,36,750	0/0:17,0:18:21.05:0,21,408	0/0:15,0:15:21.07:0,21,477	1/1:10,8:18:15.05:226,15,0	1/1:9,5:14:12.04:181,12,0	0/0:13,0:13:21.07:0,21,479	0/0:17,0:17:27.09:0,27,580	0/0:13,0:13:21.07:0,21,480	1/1:12,16:28:33.11:497,33,0	1/1:10,6:16:15.05:226,15,0	0/0:25,0:21:11.93:0,12,181	0/0:17,0:16:15.05:0,15,201	0/0:6,0:6:6.01:0,6,77	0/0:5,0:10:14.97:0,15,200	0/0:6,0:11:9.03:0,9,157	0/0:5,0:9:15.05:0,15,247	0/0:17,0:31:39.12:0,39,643	0/1:11,7:18:44.84:272,0,45	0/0:19,0:19:27.07:0,27,419	0/0:11,0:11:21.07:0,21,480
chr10	106378174	.	A	AGAAAGAAAGAAG	2968.42	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=-3.059;DP=481;FS=2.714;HRun=0;HaplotypeScore=157.3391;InbreedingCoeff=0.6252;MQ=57.99;MQ0=8;MQRankSum=-1.780;QD=18.79;ReadPosRankSum=-4.595;VQSLOD=1.5426;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:42.95:0,43,657	0/1:7,0:7:52.94:53,0,163	0/1:8,0:6:5.37:5,0,41	0/0:5,0:3:8.90:0,9,69	0/0:16,0:16:38.57:0,39,747	0/1:20,0:20:22.19:22,0,236	0/0:15,0:15:35.92:0,36,373	1/1:29,0:27:57.28:482,57,0	0/0:27,0:27:69.06:0,69,1485	0/0:17,0:16:42.07:0,42,729	0/0:13,0:13:39.08:0,39,764	0/0:14,0:14:30.06:0,30,531	0/0:14,0:14:30.04:0,30,512	0/0:13,0:13:32.42:0,32,698	0/0:19,0:19:51.10:0,51,1076	0/0:12,0:12:30.08:0,30,755	0/0:28,0:28:66.10:0,66,1252	0/0:19,0:19:48.52:0,49,739	1/1:18,0:12:32.98:377,33,0	1/1:1,27:32:62.16:1014,62,0	1/1:14,0:14:35.90:460,36,0	0/1:12,0:12:88.78:232,0,89	0/0:15,0:15:31.92:0,32,247	0/0:13,0:12:32.15:0,32,227	0/0:29,0:29:14.97:0,15,386	0/0:14,0:13:35.75:0,36,533	1/1:18,0:18:41.88:508,42,0	0/0:21,0:21:57.04:0,57,1053
chr10	106379899	.	G	GA	1011.03	PASS	AB=0.760;AC=11;AF=0.196;AN=56;BaseQRankSum=0.419;DP=472;FS=9.367;HRun=10;HaplotypeScore=91.5623;InbreedingCoeff=0.5460;MQ=57.17;MQ0=15;MQRankSum=-3.463;QD=9.03;ReadPosRankSum=-5.665;VQSLOD=0.6271;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:37.86:0,38,301	1/1:1,3:4:3:29,3,0	0/0:23,0:7:2.98:0,3,24	0/0:22,0:11:8.17:0,8,69	0/0:19,0:18:26.92:0,27,222	0/0:15,0:15:23.75:0,24,180	0/0:15,0:16:22.44:0,22,177	1/1:18,12:28:27.35:439,27,0	0/0:21,0:21:29.35:0,29,260	0/1:16,3:18:5.04:5,0,170	0/0:11,1:11:16.18:0,16,143	0/0:8,0:8:14.96:0,15,143	0/0:12,0:11:10.48:0,10,97	0/0:16,0:16:10.52:0,11,180	0/0:21,0:21:35.88:0,36,293	0/0:12,0:11:9.70:0,10,95	0/0:15,0:15:20.64:0,21,172	0/0:12,0:13:9.60:0,10,98	0/1:5,5:9:3.14:162,0,3	1/1:11,8:18:28.40:262,28,0	0/1:4,2:5:18.63:26,0,19	0/0:12,0:12:14.96:0,15,123	0/0:12,0:13:19.34:0,19,178	0/0:26,1:27:5.68:0,6,244	0/0:15,0:15:20.96:0,21,172	0/0:27,0:27:25.79:0,26,234	1/1:11,10:23:4.43:240,4,0	0/0:15,0:15:21.40:0,21,150
chr10	106381646	.	TC	T	1976.36	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.151;DP=457;FS=39.122;HRun=2;HaplotypeScore=59.5617;InbreedingCoeff=0.9725;MQ=78.01;MQ0=4;MQRankSum=-2.091;QD=21.48;ReadPosRankSum=0.289;VQSLOD=1.3795;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.29:0,90,1405	0/0:2,0:2:6.02:0,6,96	0/0:31,0:30:76.33:0,76,1358	0/0:17,0:16:45.15:0,45,682	0/0:13,0:13:39.13:0,39,621	0/0:19,0:19:57.19:0,57,908	0/0:25,0:25:72.25:0,72,1148	1/1:12,10:21:56.18:508,56,0	0/0:20,0:20:51.17:0,51,814	0/0:6,0:6:18.06:0,18,288	0/0:9,0:8:24.08:0,24,384	0/0:17,0:16:48.16:0,48,766	0/0:13,0:12:33.11:0,33,527	0/0:10,0:10:30.10:0,30,479	0/0:22,0:22:60.20:0,60,941	0/0:12,0:12:36.12:0,36,573	0/0:16,0:16:45.15:0,45,719	0/0:19,0:19:45.15:0,45,710	1/1:8,2:10:26.95:294,27,0	1/1:8,6:13:32.16:276,32,0	1/1:21,9:30:69.09:693,69,0	0/0:8,0:8:24.08:0,24,384	0/0:12,0:12:33.11:0,33,528	0/0:26,0:26:75.24:0,75,1173	0/0:10,0:10:30.09:0,30,457	0/0:15,0:15:45.15:0,45,719	1/1:12,4:16:46.68:380,47,0	0/0:11,0:11:33.11:0,33,528
chr10	106381649	.	G	GA	2111.14	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.420;DP=459;FS=43.969;HRun=1;HaplotypeScore=64.3058;InbreedingCoeff=0.9723;MQ=79.17;MQ0=0;MQRankSum=-2.357;QD=21.76;ReadPosRankSum=-0.492;VQSLOD=1.0353;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.19:0,84,1036	0/0:2,0:2:6.02:0,6,78	0/0:31,0:30:86.05:0,86,1039	0/0:16,0:15:39.13:0,39,506	0/0:11,0:11:30.10:0,30,389	0/0:19,0:19:57.19:0,57,739	0/0:26,0:26:75.19:0,75,937	1/1:14,10:23:59.67:556,60,0	0/0:20,0:20:54.18:0,54,698	0/0:6,0:6:18.06:0,18,233	0/0:10,0:10:24.08:0,24,312	0/0:17,0:17:51.17:0,51,660	0/0:12,0:12:33.11:0,33,428	0/0:10,0:10:27.09:0,27,350	0/0:22,0:22:66.09:0,66,787	0/0:13,0:13:36.12:0,36,467	0/0:18,0:18:48.16:0,48,620	0/0:20,0:20:45.15:0,45,584	1/1:10,1:11:27:283,27,0	1/1:7,6:13:32.28:297,32,0	1/1:23,7:30:65.78:669,66,0	0/0:8,0:8:24.08:0,24,312	0/0:12,0:12:33.05:0,33,382	0/0:24,0:24:72.17:0,72,898	0/0:11,0:11:30.10:0,30,389	0/0:15,0:15:42.14:0,42,545	1/1:15,4:18:53.59:481,54,0	0/0:11,0:11:33.11:0,33,428
chr10	106385543	.	TA	T	1861	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.579;DP=623;FS=0.409;HRun=12;HaplotypeScore=67.9575;InbreedingCoeff=0.9276;MQ=76.79;MQ0=0;MQRankSum=0.196;QD=14.77;ReadPosRankSum=-1.161;VQSLOD=3.9182;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:63.10:0,63,624	0/0:6,0:6:9.02:0,9,91	0/0:23,1:21:35.96:0,36,339	0/0:19,0:18:26.82:0,27,217	0/0:25,0:25:54.05:0,54,527	0/0:17,0:17:42.07:0,42,421	0/0:13,0:13:30.06:0,30,305	1/1:8,24:33:21.64:481,22,0	0/0:10,0:10:18.04:0,18,183	0/0:29,0:29:47.98:0,48,468	0/0:22,0:22:56.94:0,57,557	0/0:11,0:11:27.04:0,27,268	0/0:14,1:15:15.52:0,16,322	0/0:17,1:18:18.81:0,19,355	0/0:34,0:34:90.17:0,90,908	0/0:21,0:21:54.10:0,54,543	0/0:41,0:41:87.87:0,88,1025	0/0:23,0:23:63.11:0,63,632	1/1:5,13:18:38.81:302,39,0	1/1:4,21:25:1.77:373,2,0	1/1:0,13:14:31.91:238,32,0	0/0:19,0:19:51.09:0,51,512	0/0:27,0:27:60.08:0,60,590	0/0:30,2:32:34.68:0,35,709	0/0:20,0:20:45.08:0,45,452	0/0:34,1:36:64.21:0,64,801	1/1:4,31:36:82.53:633,83,0	0/0:9,0:9:24.03:0,24,236
chr10	106386517	.	C	CTT	5947.54	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.496;DP=626;FS=2.260;HRun=0;HaplotypeScore=69.6975;InbreedingCoeff=0.9998;MQ=80.23;MQ0=1;MQRankSum=-1.649;QD=52.63;ReadPosRankSum=-3.516;VQSLOD=4.4587;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1847	1/1:0,12:12:32.94:629,33,0	0/0:20,0:20:48.13:0,48,722	0/0:16,0:16:42.07:0,42,606	0/0:26,0:26:78.25:0,78,1244	0/0:27,0:27:78.25:0,78,1235	0/0:22,0:22:66.21:0,66,1052	1/1:2,21:25:75.23:1416,75,0	0/0:24,0:24:72.21:0,72,1118	0/0:27,0:27:81.26:0,81,1280	0/0:21,0:21:63.20:0,63,997	0/0:28,0:28:78.25:0,78,1248	0/0:15,0:15:42.13:0,42,661	0/0:24,0:24:69.24:0,69,1114	0/0:25,0:25:75.24:0,75,1183	0/0:19,0:19:57.17:0,57,881	0/0:26,0:26:78.23:0,78,1220	0/0:29,0:29:87.24:0,87,1352	1/1:0,15:20:60.10:998,60,0	1/1:0,24:24:69.17:1321,69,0	1/1:0,13:13:36.12:731,36,0	0/0:23,0:23:69.22:0,69,1100	0/0:16,0:16:48.15:0,48,755	0/0:18,0:18:54.17:0,54,853	0/0:24,0:24:69.22:0,69,1101	0/0:31,0:31:93.32:0,93,1517	1/1:1,17:17:41.98:852,42,0	0/0:11,0:11:33.11:0,33,538
chr10	106387917	.	C	CA	2184.84	PASS	AB=0.955;AC=12;AF=0.214;AN=56;BaseQRankSum=-8.300;DP=576;FS=0.911;HRun=11;HaplotypeScore=57.6689;InbreedingCoeff=0.7776;MQ=70.59;MQ0=0;MQRankSum=-0.508;QD=14.76;ReadPosRankSum=-3.323;VQSLOD=3.0061;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,125,966	0/0:9,0:10:22.95:0,23,168	0/0:11,0:10:11.72:0,12,80	0/1:15,0:14:13.45:13,0,111	0/0:23,0:23:47.68:0,48,361	0/0:29,0:28:68.64:0,69,525	0/0:26,0:26:59.71:0,60,464	1/1:7,25:32:34.68:715,35,0	0/0:24,0:23:53.78:0,54,418	0/0:18,0:18:44.79:0,45,346	0/0:22,0:22:62.67:0,63,479	0/0:19,0:19:50.80:0,51,395	0/0:14,0:14:38.85:0,39,302	0/0:11,0:11:23.88:0,24,186	0/0:26,0:27:58.74:0,59,443	0/0:14,0:14:26.89:0,27,209	0/0:26,0:27:64.72:0,65,488	0/1:18,2:20:7.21:7,0,301	1/1:8,15:23:47.99:471,48,0	1/1:2,16:19:50.86:480,51,0	1/1:9,17:26:21.85:403,22,0	0/0:12,1:13:5.42:0,5,225	0/0:19,0:19:44.82:0,45,348	0/0:14,0:14:38.83:0,39,302	0/0:21,1:23:28.52:0,29,392	0/0:26,0:27:61.72:0,62,462	1/1:2,11:13:27.05:274,27,0	0/0:10,0:10:23.90:0,24,186
chr10	106388752	.	CA	C	1559.78	PASS	AB=0.625;AC=9;AF=0.161;AN=56;BaseQRankSum=7.595;DP=514;FS=11.201;HRun=9;HaplotypeScore=54.8310;InbreedingCoeff=0.7958;MQ=55.94;MQ0=3;MQRankSum=-1.477;QD=16.77;ReadPosRankSum=-1.583;VQSLOD=2.3245;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.22:0,87,974	0/0:14,0:14:36.11:0,36,413	0/0:7,0:3:8.86:0,9,83	0/0:3,0:2:0.47:0,0,1	0/0:28,0:28:78.18:0,78,862	0/0:20,0:20:48.14:0,48,554	0/0:16,0:15:33.09:0,33,371	1/1:9,17:24:51.02:467,51,0	0/0:8,0:8:21.05:0,21,234	0/0:20,1:21:20.67:0,21,484	0/0:23,0:23:54.15:0,54,613	0/0:18,0:18:42.08:0,42,468	0/0:11,0:11:21.06:0,21,242	0/0:13,0:13:26.95:0,27,278	0/0:8,0:8:21.06:0,21,242	0/0:16,0:16:39.11:0,39,441	0/0:27,0:28:81.18:0,81,899	0/0:23,0:23:63.19:0,63,727	0/1:6,9:14:27.24:277,0,27	1/1:5,18:23:22.34:449,22,0	1/1:3,2:4:8.99:77,9,0	0/0:12,0:12:24.07:0,24,277	0/0:19,1:19:17.67:0,18,457	0/0:6,0:6:12.04:0,12,138	0/0:30,0:30:72.20:0,72,821	0/0:37,0:37:88.49:0,88,992	1/1:10,14:23:22.40:449,22,0	0/0:27,0:27:69.20:0,69,792
chr10	106388798	.	CT	C	1780.39	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.595;DP=464;FS=11.974;HRun=10;HaplotypeScore=50.5528;InbreedingCoeff=0.7821;MQ=57.87;MQ0=2;MQRankSum=-6.511;QD=17.80;ReadPosRankSum=-3.793;VQSLOD=1.9263;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:66.83:0,67,682	0/0:2,0:12:28.57:0,29,161	0/0:2,0:1:3.01:0,3,33	0/0:4,0:3:1.05:0,1,37	0/0:28,0:28:66.16:0,66,721	0/0:12,1:14:12.88:0,13,353	0/0:8,0:8:21.06:0,21,232	1/1:11,27:36:78.80:672,79,0	0/0:8,0:8:21.06:0,21,232	0/0:25,1:27:49.01:0,49,733	0/0:21,0:21:60.16:0,60,664	0/0:17,0:17:45.05:0,45,479	0/0:8,0:8:21.06:0,21,232	0/0:9,1:10:1.17:0,1,239	0/0:8,0:8:21.06:0,21,232	0/0:8,1:9:1:0,1,230	0/0:26,0:26:66.18:0,66,730	0/0:25,0:25:68.70:0,69,740	1/1:6,8:14:18.10:220,18,0	1/1:2,18:20:53.99:469,54,0	1/1:1,6:6:17.98:153,18,0	0/0:7,0:7:21.03:0,21,216	0/0:16,0:16:30.08:0,30,332	0/0:4,0:4:4.05:0,4,92	0/0:33,0:33:93.22:0,93,1006	0/0:30,1:31:61.18:0,61,903	1/1:2,19:20:50.96:436,51,0	0/0:17,0:17:42.10:0,42,456
chr10	106390612	.	CA	C	709.72	PASS	AB=0.724;AC=12;AF=0.214;AN=56;BaseQRankSum=2.208;DP=532;FS=21.288;HRun=13;HaplotypeScore=63.2487;InbreedingCoeff=0.4716;MQ=63.02;MQ0=13;MQRankSum=-0.665;QD=5.50;ReadPosRankSum=-3.556;VQSLOD=-0.2223;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:37.84:0,38,480	0/1:1,5:6:11.27:92,0,11	0/0:58,2:13:10.73:0,11,79	0/0:56,0:19:1.01:0,1,114	0/0:20,0:19:24.01:0,24,224	0/0:16,2:17:17.16:0,17,328	0/0:23,0:22:45.71:0,46,395	1/1:8,17:27:19:298,19,0	0/0:9,0:10:23.86:0,24,212	0/0:13,0:13:30.02:0,30,282	0/0:15,0:15:26.59:0,27,234	0/0:9,1:11:2.15:0,2,168	0/0:6,0:6:9.01:0,9,86	0/0:12,0:12:15.02:0,15,145	0/0:11,0:11:22.28:0,22,207	0/1:14,3:17:7.59:8,0,241	0/0:27,0:26:37.99:0,38,322	0/0:19,1:20:32.73:0,33,301	1/1:5,5:10:14.01:93,14,0	1/1:3,11:15:29.30:200,29,0	0/1:3,8:11:17.28:54,0,17	0/0:8,0:8:0.17:0,0,127	0/0:12,0:10:5.15:0,5,211	0/0:10,0:10:14.94:0,15,134	0/0:12,3:15:11.13:0,11,264	0/1:21,2:22:1.75:2,0,308	1/1:9,9:19:19.67:127,20,0	0/0:20,1:19:11.26:0,11,264
chr10	106392381	.	A	AGG	1417.20	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-0.205;DP=460;FS=13.562;HRun=0;HaplotypeScore=84.8422;InbreedingCoeff=0.9156;MQ=55.90;MQ0=22;MQRankSum=-0.210;QD=30.15;ReadPosRankSum=1.994;VQSLOD=4.9449;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:59.83:0,60,690	0/0:7,0:7:2.96:0,3,20	0/0:30,0:9:10.18:0,10,82	0/0:31,0:9:12.48:0,12,142	0/0:23,0:22:33.12:0,33,417	0/0:19,0:19:48.15:0,48,694	0/0:17,0:15:39.04:0,39,475	1/1:12,1:13:29.31:409,29,0	0/0:8,0:8:17.99:0,18,209	0/0:13,0:13:29.33:0,29,322	0/0:18,0:18:44.90:0,45,555	0/0:12,0:12:26.98:0,27,338	0/0:10,0:10:26.98:0,27,332	0/0:11,0:11:32.88:0,33,374	0/0:18,0:18:36.79:0,37,394	0/0:10,0:9:23.94:0,24,310	0/0:24,0:24:56.08:0,56,650	0/0:16,0:14:32.59:0,33,387	1/1:1,3:4:8.77:128,9,0	1/1:12,1:13:30.88:425,31,0	1/1:5,0:5:15.05:227,15,0	0/0:16,0:16:11.78:0,12,286	0/0:22,0:21:41.97:0,42,488	0/0:13,0:13:29.44:0,29,328	0/0:14,0:14:27.75:0,28,273	0/0:22,0:21:57.05:0,57,716	1/1:12,0:11:33.05:397,33,0	0/0:26,0:19:45.50:0,45,579
chr10	106392399	.	AAAAG	A	1317.41	PASS	AB=0.938;AC=11;AF=0.196;AN=56;BaseQRankSum=5.385;DP=512;FS=8.672;HRun=0;HaplotypeScore=86.3340;InbreedingCoeff=0.8585;MQ=67.35;MQ0=18;MQRankSum=0.095;QD=13.44;ReadPosRankSum=-3.896;VQSLOD=1.3311;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:68.69:0,69,822	0/0:10,0:10:23.97:0,24,267	0/0:34,0:15:4.94:0,5,227	0/0:26,0:13:6.55:0,7,150	0/0:35,0:34:61.47:0,61,558	0/0:10,0:10:21.01:0,21,259	0/1:14,1:13:2.76:3,0,320	1/1:4,18:22:44.87:362,45,0	0/0:8,0:8:12.02:0,12,200	0/0:22,0:22:47.89:0,48,491	0/0:21,0:21:46.15:0,46,436	0/0:13,0:13:23.89:0,24,293	0/0:13,0:13:31.46:0,31,426	0/0:11,0:11:21.01:0,21,310	0/0:21,1:22:12.73:0,13,480	0/0:9,0:9:18.03:0,18,311	0/0:20,0:20:43.74:0,44,694	0/0:18,0:16:29.13:0,29,344	1/1:10,0:10:22.09:161,22,0	1/1:24,0:24:53.69:412,54,0	1/1:5,0:5:14.94:117,15,0	0/0:17,0:17:38.96:0,39,483	0/0:23,0:22:53.36:0,53,646	0/0:16,0:16:39.02:0,39,512	0/0:17,0:17:38.71:0,39,482	0/0:21,0:20:35.89:0,36,434	1/1:22,0:21:46.92:436,47,0	0/0:16,0:12:35.98:0,36,487
chr10	106392400	.	AAAG	A	1409.25	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=5.006;DP=512;FS=31.732;HRun=0;HaplotypeScore=76.9149;InbreedingCoeff=0.7916;MQ=67.38;MQ0=18;MQRankSum=-0.313;QD=12.15;ReadPosRankSum=-5.421;VQSLOD=0.0650;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:47.80:0,48,633	0/0:10,0:10:23.87:0,24,217	0/0:34,0:15:16.29:0,16,216	0/1:26,0:13:1.16:1,0,132	0/0:34,1:34:53.97:0,54,470	0/0:11,0:11:7.82:0,8,202	0/0:15,0:13:5.10:0,5,237	1/1:21,0:21:46.70:368,47,0	0/1:7,0:7:4.31:4,0,150	0/0:22,0:22:11.43:0,11,403	0/0:21,0:21:27.21:0,27,315	0/0:13,0:13:11.30:0,11,246	0/0:12,0:12:30.74:0,31,341	0/0:11,0:11:20.31:0,20,254	0/0:22,0:22:13.49:0,13,368	0/0:9,0:9:17.98:0,18,253	0/0:22,0:22:50.04:0,50,601	0/0:18,0:16:19.99:0,20,279	1/1:11,0:11:26.96:189,27,0	1/1:23,1:24:55.64:431,56,0	1/1:5,0:5:14.94:117,15,0	0/0:17,0:17:37.28:0,37,375	0/0:22,0:21:48.04:0,48,514	0/0:17,0:17:41.28:0,41,436	0/0:17,0:17:34.73:0,35,367	0/0:21,0:20:34.97:0,35,381	1/1:19,3:22:47.45:472,47,0	0/0:16,0:12:35.78:0,36,400
chr10	106392401	.	AAG	A	1433.02	PASS	AB=0.991;AC=15;AF=0.268;AN=56;BaseQRankSum=6.242;DP=506;FS=67.380;HRun=0;HaplotypeScore=67.0454;InbreedingCoeff=0.5688;MQ=67.72;MQ0=17;MQRankSum=-2.515;QD=7.66;ReadPosRankSum=-6.639;VQSLOD=-0.6829;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:17.29:0,17,459	0/0:10,0:10:23.76:0,24,189	0/0:34,0:15:11.43:0,11,196	0/1:26,0:13:1.71:2,0,129	0/0:34,0:33:30.75:0,31,394	0/0:13,0:13:5.82:0,6,200	0/1:15,0:13:2.36:2,0,172	1/1:20,0:20:47.17:368,47,0	0/0:7,0:7:7.67:0,8,127	0/1:22,0:22:18.83:19,0,355	0/1:21,0:21:31.88:32,0,255	0/0:14,0:14:14.01:0,14,232	0/0:12,0:12:26.31:0,26,256	0/0:10,0:10:19.77:0,20,210	0/1:21,1:22:8.69:9,0,263	0/0:9,0:9:20.96:0,21,221	0/0:20,1:21:38.54:0,39,478	0/0:17,0:16:18.36:0,18,236	1/1:11,0:11:26.96:190,27,0	1/1:20,3:23:56.48:430,56,0	1/1:4,1:5:14.94:117,15,0	0/0:15,0:15:36.39:0,36,299	0/0:22,0:21:30.08:0,30,410	0/0:17,0:17:35.35:0,35,354	0/0:16,1:17:30.09:0,30,285	0/0:21,0:20:37.27:0,37,365	1/1:17,5:21:47.42:444,47,0	0/0:16,0:12:34.76:0,35,321
chr10	106392458	.	T	TA	2341.73	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-2.362;DP=431;FS=13.325;HRun=6;HaplotypeScore=43.9549;InbreedingCoeff=0.8597;MQ=63.86;MQ0=0;MQRankSum=-2.860;QD=24.91;ReadPosRankSum=-3.136;VQSLOD=1.2729;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.03:0,63,612	0/0:11,0:11:27.04:0,27,267	0/0:5,0:3:2.69:0,3,8	0/1:6,0:4:10.62:11,0,42	0/0:25,0:25:72.03:0,72,717	0/0:17,0:17:51.11:0,51,519	0/0:16,0:16:48.05:0,48,463	1/1:5,26:30:72.21:872,72,0	0/0:16,0:16:42.08:0,42,421	0/0:13,0:13:36.08:0,36,367	0/0:16,0:16:48.11:0,48,489	0/0:14,0:14:42.07:0,42,412	0/0:12,0:12:30.04:0,30,293	0/0:11,0:11:30.06:0,30,300	0/0:16,0:16:42.08:0,42,418	0/0:12,0:12:30.04:0,30,294	0/0:18,0:18:42.09:0,42,427	0/0:16,0:16:44.98:0,45,433	1/1:2,12:14:36.11:447,36,0	1/1:1,20:21:42.06:488,42,0	1/1:0,6:6:15.05:186,15,0	0/0:13,0:13:33.07:0,33,336	0/0:21,0:21:54.10:0,54,542	0/0:14,0:14:30.04:0,30,298	0/0:18,0:18:45.03:0,45,445	0/0:22,0:22:51.11:0,51,519	1/1:2,14:16:42.13:514,42,0	0/0:9,0:9:27.06:0,27,275
chr10	106392873	.	AGT	A	2963.69	PASS	AB=0.935;AC=11;AF=0.196;AN=56;BaseQRankSum=10.854;DP=755;FS=5.884;HRun=0;HaplotypeScore=108.5851;InbreedingCoeff=0.9229;MQ=61.19;MQ0=4;MQRankSum=-6.998;QD=18.41;ReadPosRankSum=-2.266;VQSLOD=3.0934;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,99,1591	0/0:9,0:9:20.90:0,21,159	0/0:36,0:25:51.12:0,51,708	0/0:24,0:18:42.41:0,42,516	0/0:24,0:24:51.16:0,51,812	0/0:27,0:27:72.20:0,72,1100	0/0:28,1:29:63.21:0,63,1010	1/1:11,29:40:87.19:990,87,0	0/0:23,0:23:57.19:0,57,935	0/0:32,0:32:90.27:0,90,1372	0/0:20,0:20:60.12:0,60,923	0/0:25,0:25:69.99:0,70,1058	0/0:24,0:24:60.19:0,60,957	0/0:28,0:28:75.21:0,75,1151	0/0:28,0:28:72.23:0,72,1150	0/0:18,0:18:51.17:0,51,824	0/0:34,0:34:90.22:0,90,1368	0/0:28,0:28:75.23:0,75,1175	1/1:5,10:15:39.06:456,39,0	1/1:7,23:30:68.98:772,69,0	1/1:1,27:28:41.96:449,42,0	0/0:26,0:26:69.22:0,69,1099	0/1:27,2:29:2.82:3,0,1006	0/0:37,0:37:99:0,102,1622	0/0:24,0:24:63.18:0,63,951	0/0:38,0:38:99:0,100,1578	1/1:1,15:15:39.09:469,39,0	0/0:16,0:16:39.12:0,39,608
chr10	106392933	.	GTGTGTGTCTGTGTCCGTGTGTT	G	2853.56	PASS	AB=0.628;AC=9;AF=0.161;AN=56;BaseQRankSum=10.132;DP=799;FS=19.913;HRun=0;HaplotypeScore=438.1916;InbreedingCoeff=0.8389;MQ=58.93;MQ0=2;MQRankSum=-3.653;QD=26.67;ReadPosRankSum=-4.297;VQSLOD=-0.0236;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,162,12484	0/0:9,0:9:21.07:0,21,1696	0/0:45,0:28:7.36:0,7,2283	0/0:35,0:24:28.18:0,28,523	0/0:23,0:23:60.21:0,60,4731	0/0:25,0:25:66.23:0,66,4732	0/0:26,0:26:69.22:0,69,4072	1/1:16,14:30:36.03:474,36,0	0/0:30,0:30:84.29:0,84,7033	0/0:36,0:36:99:0,102,6887	0/0:25,0:25:63.20:0,63,4879	0/0:23,0:23:59.99:0,60,3850	0/0:33,0:33:75.26:0,75,6437	0/0:26,0:26:48.53:0,49,4991	0/0:26,0:26:66.23:0,66,5354	0/0:27,0:27:54.50:0,54,4576	0/0:27,0:27:69.18:0,69,4882	0/0:30,0:30:41.86:0,42,4358	1/1:8,8:14:21.07:826,21,0	0/1:11,16:27:4.86:88,0,5	1/1:15,2:17:3.65:99,4,0	0/0:26,0:26:69.24:0,69,4850	0/0:39,0:39:99:0,105,7479	0/0:48,0:47:99:0,117,8516	0/0:21,0:21:51.18:0,51,3887	0/0:34,0:34:81.28:0,81,5874	1/1:6,11:17:36.10:1523,36,0	0/0:17,0:17:42.14:0,42,2503
chr10	106393004	.	GTGTGTGTGTC	G	2369.40	PASS	AB=0.848;AC=9;AF=0.161;AN=56;BaseQRankSum=5.048;DP=895;FS=1.150;HRun=0;HaplotypeScore=279.2817;InbreedingCoeff=0.8634;MQ=54.20;MQ0=22;MQRankSum=-7.867;QD=16.34;ReadPosRankSum=-4.883;VQSLOD=1.7961;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,156,5061	0/0:7,0:7:15.05:0,15,674	0/0:24,0:10:11.71:0,12,217	0/0:24,0:7:11.09:0,11,73	0/0:35,0:34:90.26:0,90,3279	0/0:34,0:33:77.93:0,78,2700	0/0:47,0:46:99:0,111,3675	1/1:52,0:43:25.24:1012,25,0	0/0:25,0:24:66.22:0,66,2577	0/0:42,0:40:99:0,111,4001	0/0:33,0:32:75.09:0,75,2960	0/0:28,0:28:75.15:0,75,2843	0/0:29,0:29:84.27:0,84,2996	0/0:40,0:39:99:0,108,4179	0/0:30,0:30:84.29:0,84,3612	0/0:33,0:33:80.17:0,80,3034	0/0:39,0:39:78.75:0,79,3808	0/0:19,0:20:46.24:0,46,1403	0/1:23,5:27:1.96:769,0,2	1/1:16,15:30:9.70:118,10,0	1/1:17,0:13:6.64:56,7,0	0/0:33,0:33:87.30:0,87,3744	0/0:29,0:29:66.22:0,66,2633	0/0:51,0:49:99:0,117,4233	0/0:24,0:24:66.21:0,66,2355	0/0:47,0:46:99:0,129,4892	1/1:12,5:17:26.78:569,27,0	0/0:13,0:13:33.11:0,33,1279
chr10	106393257	.	ACCATTCCATCTCAGATAAGGGAAGTGAGGGT	A	7858.40	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.873;DP=877;FS=5.169;HRun=0;HaplotypeScore=648.5302;InbreedingCoeff=0.9675;MQ=88.45;MQ0=0;MQRankSum=-8.642;QD=95.83;ReadPosRankSum=2.072;VQSLOD=1.1348;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,154,18870	0/0:19,0:19:57.20:0,57,5549	0/0:37,0:37:99:0,105,7151	0/0:29,0:28:81.24:0,81,5346	0/0:31,0:31:93.32:0,93,10341	0/0:33,0:33:99:0,99,9563	0/0:40,0:40:99:0,114,13601	1/1:19,0:19:6.02:146,6,0	0/0:48,0:48:99:0,144,16745	0/0:36,0:36:99:0,105,11950	0/0:29,0:29:87.30:0,87,11628	0/0:44,0:44:99:0,132,16404	0/0:36,0:36:99:0,108,14310	0/0:46,0:46:99:0,135,16658	0/0:45,0:45:99:0,135,17598	0/0:39,0:39:99:0,114,14729	0/0:36,0:36:99:0,108,12924	0/0:29,0:29:87.26:0,87,11369	1/1:6,6:12:18.06:1080,18,0	1/1:6,18:23:48.16:3958,48,0	1/1:2,10:12:15.03:1191,15,0	0/0:38,0:38:99:0,111,13655	0/0:38,0:38:99:0,105,13071	0/0:28,0:28:84.28:0,84,9728	0/0:23,0:23:69.24:0,69,8028	0/0:28,0:28:84.27:0,84,10073	1/1:6,9:15:18.06:1484,18,0	0/0:11,0:10:33.11:0,33,4474
chr10	106395380	.	G	GC	3092.28	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-9.609;DP=515;FS=10.255;HRun=7;HaplotypeScore=51.3244;InbreedingCoeff=0.9594;MQ=91.29;MQ0=0;MQRankSum=-4.458;QD=26.66;ReadPosRankSum=-1.735;VQSLOD=3.1843;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:57.06:0,57,550	0/0:9,0:9:21.02:0,21,199	0/0:19,0:19:41.98:0,42,385	0/0:24,0:24:59.99:0,60,552	0/0:9,0:9:21.03:0,21,203	0/0:11,0:11:24.03:0,24,231	0/0:23,0:23:57.06:0,57,539	1/1:4,12:16:36.11:435,36,0	0/0:22,0:22:48.07:0,48,463	0/0:16,0:16:36.04:0,36,344	0/0:3,0:3:6.01:0,6,58	0/0:32,0:32:93.15:0,93,896	0/0:11,0:11:29.94:0,30,276	0/0:20,0:20:51.08:0,51,492	0/0:9,0:9:24.03:0,24,232	0/0:24,0:24:57.08:0,57,550	0/0:23,0:23:57.09:0,57,550	0/0:16,0:16:45.07:0,45,435	1/1:2,13:15:36.08:411,36,0	1/1:1,13:14:36.11:429,36,0	1/1:6,54:60:99:1667,138,0	0/0:16,0:16:33.05:0,33,319	0/0:3,0:3:9.01:0,9,87	0/0:33,0:33:84.12:0,84,811	0/0:14,0:14:36.05:0,36,348	0/0:19,0:19:30.03:0,30,289	1/1:2,9:11:27.08:326,27,0	0/0:11,0:11:30.05:0,30,290
chr10	106397514	.	CCGAG	C	2826.16	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=10.423;DP=530;FS=2.407;HRun=0;HaplotypeScore=85.8092;InbreedingCoeff=0.8354;MQ=72.84;MQ0=0;MQRankSum=-4.918;QD=28.84;ReadPosRankSum=-0.310;VQSLOD=3.2093;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,2660	0/0:9,0:9:24.08:0,24,587	0/0:11,0:11:17.99:0,18,564	0/1:6,0:6:16.43:16,0,148	0/0:14,0:14:36.12:0,36,913	0/0:18,0:18:48.15:0,48,1125	0/0:29,0:29:72.22:0,72,1730	1/1:4,17:21:48.15:802,48,0	0/0:21,0:21:57.20:0,57,1443	0/0:18,0:18:45.15:0,45,1171	0/0:3,0:3:6.02:0,6,157	0/0:27,0:27:78.27:0,78,2013	0/0:20,0:20:51.18:0,51,1296	0/0:29,0:29:75.26:0,75,1934	0/0:16,0:16:42.14:0,42,1042	0/0:15,0:15:45.15:0,45,1178	0/0:27,0:27:69.24:0,69,1773	0/0:38,0:38:99:0,102,2671	1/1:3,10:13:30.10:545,30,0	1/1:0,3:3:6.02:109,6,0	1/1:6,28:34:48.16:872,48,0	0/0:5,0:5:12.04:0,12,314	0/0:10,0:10:27.08:0,27,652	0/0:34,0:34:96.33:0,96,2459	0/0:17,0:17:51.18:0,51,1297	0/0:24,0:24:72.25:0,72,1856	1/1:4,17:21:36.12:654,36,0	0/0:10,0:10:30.10:0,30,695
chr10	106403981	.	T	TA	5708.10	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=16.177;DP=801;FS=4.065;HRun=1;HaplotypeScore=87.4153;InbreedingCoeff=0.9999;MQ=73.85;MQ0=1;MQRankSum=-1.444;QD=40.48;ReadPosRankSum=-2.137;VQSLOD=4.4457;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,171,2185	0/0:13,0:13:39.11:0,39,492	0/0:31,0:30:87.75:0,88,1120	0/0:24,0:23:49.65:0,50,719	0/0:30,0:30:87.26:0,87,1112	0/0:23,0:23:69.21:0,69,882	0/0:31,0:31:90.28:0,90,1154	1/1:2,31:33:93.27:1287,93,0	0/0:27,0:27:75.24:0,75,973	0/0:27,0:27:81.26:0,81,1039	0/0:20,0:20:54.16:0,54,686	0/0:32,0:32:93.30:0,93,1207	0/0:36,0:36:99:0,105,1363	0/0:37,0:37:99:0,111,1424	0/0:36,0:35:99:0,105,1349	0/0:46,0:46:99:0,138,1778	0/0:39,0:39:99:0,117,1512	0/0:26,0:26:78.23:0,78,996	1/1:2,16:18:51.13:684,51,0	1/1:3,19:22:63.12:849,63,0	1/1:2,41:43:99:1844,129,0	0/0:30,0:30:87.28:0,87,1130	0/0:21,0:21:60.19:0,60,775	0/0:23,0:23:66.21:0,66,857	0/0:18,0:18:54.18:0,54,701	0/0:23,0:23:69.22:0,69,896	1/1:0,25:25:72.24:1043,72,0	0/0:10,0:10:30.06:0,30,359
chr10	106403982	.	ATC	A	540.03	PASS	AB=0.961;AC=8;AF=0.143;AN=56;BaseQRankSum=16.339;DP=800;FS=61.358;HRun=0;HaplotypeScore=121.0431;InbreedingCoeff=0.7137;MQ=73.46;MQ0=1;MQRankSum=-4.996;QD=3.89;ReadPosRankSum=-1.312;VQSLOD=0.0494;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,175,3419	0/0:13,0:13:39.12:0,39,756	0/0:30,0:30:90.31:0,90,1782	0/0:22,0:22:62.02:0,62,1153	0/0:30,0:30:87.27:0,87,1728	0/0:23,0:23:69.22:0,69,1366	0/0:31,0:31:90.31:0,90,1825	0/1:31,1:32:13.83:193,0,14	0/0:27,0:27:81.26:0,81,1594	0/0:27,0:27:81.28:0,81,1644	0/0:20,0:20:60.19:0,60,1148	0/0:32,0:32:96.33:0,96,1932	0/0:36,0:36:99:0,108,2152	0/0:37,0:37:99:0,111,2195	0/0:37,0:36:99:0,111,2181	0/0:46,0:46:99:0,138,2768	0/0:39,0:39:99:0,117,2376	0/0:26,0:26:78.27:0,78,1580	1/1:17,1:18:30.83:252,31,0	0/1:19,1:20:19.33:56,0,19	1/1:43,1:44:28.47:146,28,0	0/0:30,0:30:90.30:0,90,1791	0/0:22,0:22:63.20:0,63,1236	0/0:23,0:23:69.24:0,69,1388	0/0:18,0:18:54.19:0,54,1097	0/0:23,0:23:69.24:0,69,1392	1/1:25,0:25:17.48:46,17,0	0/0:10,0:10:30.07:0,30,535
chr10	106405231	.	AGGG	A	3783.42	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.582;DP=642;FS=4.072;HRun=5;HaplotypeScore=91.3004;InbreedingCoeff=0.9925;MQ=82.82;MQ0=0;MQRankSum=-3.460;QD=39.83;ReadPosRankSum=0.519;VQSLOD=2.5908;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,2182	0/0:5,0:5:15.05:0,15,316	0/0:21,0:21:62.83:0,63,1268	0/0:20,0:20:48.13:0,48,1034	0/0:16,0:16:48.14:0,48,1019	0/0:34,0:34:99:0,102,2266	0/0:45,0:45:99:0,135,3000	1/1:0,15:15:42.13:676,42,0	0/0:26,0:26:78.26:0,78,1750	0/0:23,0:23:69.24:0,69,1581	0/0:16,0:16:45.15:0,45,952	0/0:31,0:31:93.29:0,93,2056	0/0:23,0:23:69.22:0,69,1526	0/0:33,0:33:93.32:0,93,2146	0/0:35,0:35:99:0,105,2359	0/0:19,0:19:54.19:0,54,1190	0/0:29,0:29:84.26:0,84,1779	0/0:25,0:25:69.22:0,69,1483	1/1:0,16:16:48.16:801,48,0	1/1:0,6:6:18.06:301,18,0	1/1:3,43:46:86.67:1454,87,0	0/0:17,0:17:51.17:0,51,1125	0/0:15,0:15:39.13:0,39,857	0/0:29,0:29:84.28:0,84,1856	0/0:19,0:19:57.16:0,57,1221	0/0:26,0:26:78.25:0,78,1722	1/1:0,12:12:33.11:552,33,0	0/0:7,0:7:18.06:0,18,415
chr10	106408195	.	A	AAGAAGC	604.66	PASS	AB=0.972;AC=7;AF=0.125;AN=56;BaseQRankSum=2.791;DP=567;FS=6.196;HRun=0;HaplotypeScore=168.8344;InbreedingCoeff=0.0570;MQ=44.00;MQ0=44;MQRankSum=-4.596;QD=4.84;ReadPosRankSum=2.779;VQSLOD=2.2178;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:66.17:0,66,1228	0/0:8,0:6:15.05:0,15,272	1/1:17,0:2:2.28:8,2,0	0/0:8,0:2:6.02:0,6,81	0/0:13,0:8:17.41:0,17,232	0/0:17,0:17:32.97:0,33,551	0/0:28,0:24:54.42:0,54,859	0/1:25,0:21:99:204,0,457	0/0:23,0:21:60.09:0,60,1038	0/0:23,0:20:41.78:0,42,650	0/0:16,0:14:22.24:0,22,289	0/0:26,0:25:52.96:0,53,895	0/0:14,0:13:35.08:0,35,580	0/0:19,0:18:38.48:0,38,666	0/0:17,0:16:30.05:0,30,464	0/0:9,0:9:24.06:0,24,386	0/0:34,0:30:46.84:0,47,821	0/0:30,0:27:62.17:0,62,1012	0/1:14,0:12:99:156,0,291	0/1:27,0:24:99:120,0,475	0/1:11,0:10:27.94:28,0,58	0/0:13,0:13:29.98:0,30,450	0/0:12,0:12:33.14:0,33,500	0/0:30,0:30:37.88:0,38,630	0/0:24,0:24:68.12:0,68,1065	0/0:30,0:29:70.85:0,71,1003	0/1:26,5:29:99:211,0,610	0/0:22,0:19:47.14:0,47,627
chr10	106414947	.	TTTTA	T	4296.12	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=13.287;DP=531;FS=7.212;HRun=0;HaplotypeScore=88.3718;InbreedingCoeff=0.8754;MQ=66.09;MQ0=0;MQRankSum=-0.223;QD=31.59;ReadPosRankSum=0.059;VQSLOD=3.8674;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:80.09:0,80,2010	0/0:5,0:5:12.04:0,12,260	0/1:10,0:10:4.20:4,0,223	0/0:7,0:7:9.03:0,9,225	0/0:30,0:30:75.26:0,75,1682	0/0:14,0:14:33.11:0,33,746	0/0:16,0:16:27.09:0,27,625	1/1:13,16:29:48.13:740,48,0	0/0:18,0:18:54.19:0,54,1273	0/0:21,0:21:45.15:0,45,1069	0/0:19,0:19:51.18:0,51,1274	0/0:19,0:19:54.15:0,54,1096	0/0:12,0:12:33.11:0,33,733	0/0:9,0:9:24.08:0,24,599	0/0:26,0:26:69.24:0,69,1660	0/0:21,0:21:54.17:0,54,1210	0/0:23,0:23:57.19:0,57,1349	0/0:14,0:14:27.09:0,27,616	1/1:10,15:25:45.13:720,45,0	1/1:4,20:24:57.19:965,57,0	1/1:4,13:17:36.12:596,36,0	0/0:6,0:6:6.02:0,6,150	0/0:9,0:9:24.08:0,24,595	0/0:11,0:10:27.09:0,27,670	0/0:30,0:30:81.28:0,81,1945	0/0:33,0:33:87.30:0,87,2130	1/1:5,25:30:75.26:1272,75,0	0/0:16,0:16:33.11:0,33,792
chr10	106415517	.	TC	T	2155.04	PASS	AB=0.948;AC=45;AF=0.900;AN=50;BaseQRankSum=-3.072;DP=237;FS=8.598;HRun=1;HaplotypeScore=35.7317;InbreedingCoeff=0.1112;MQ=76.58;MQ0=5;MQRankSum=-2.646;QD=9.17;ReadPosRankSum=0.473;VQSLOD=0.4425;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:15.44:97,15,0	1/1:1,0:1:2.98:22,3,0	0/1:29,4:9:19.32:83,0,19	0/1:23,5:15:6.12:67,0,6	./.	1/1:6,0:6:8.53:51,9,0	1/1:11,0:10:19.39:132,19,0	1/1:3,9:12:25.10:183,25,0	1/1:9,0:8:20.18:153,20,0	1/1:3,0:3:1.82:5,2,0	./.	1/1:10,0:10:14.91:113,15,0	0/1:3,0:3:11.91:12,0,14	1/1:4,0:4:9.42:70,9,0	1/1:8,0:8:14.94:117,15,0	1/1:8,0:8:14.87:99,15,0	1/1:21,0:21:40.98:261,41,0	1/1:6,0:6:8:51,8,0	1/1:8,0:8:14.97:125,15,0	1/1:3,0:3:2.98:22,3,0	1/1:6,0:7:14.49:111,14,0	0/1:1,0:1:0:0,0,0	./.	1/1:18,0:18:46.78:333,47,0	0/1:2,0:2:0:0,0,0	1/1:3,0:3:3:27,3,0	1/1:9,0:9:15.75:87,16,0	1/1:8,0:8:5.59:36,6,0
chr10	106417182	.	TA	T	499.20	PASS	AB=0.584;AC=8;AF=0.143;AN=56;BaseQRankSum=9.064;DP=355;FS=8.342;HRun=1;HaplotypeScore=50.1738;InbreedingCoeff=0.6176;MQ=58.79;MQ0=2;MQRankSum=-4.220;QD=9.42;ReadPosRankSum=-0.058;VQSLOD=0.5350;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.26:0,78,1225	0/0:3,0:3:9.03:0,9,134	0/0:11,0:3:6.02:0,6,86	0/0:13,0:11:30.06:0,30,416	0/0:16,0:16:45.15:0,45,698	0/0:20,0:20:45.15:0,45,707	0/0:8,0:8:18.06:0,18,287	0/1:3,5:11:15.63:147,0,16	0/0:9,0:9:24.08:0,24,364	0/0:16,0:16:44.89:0,45,689	0/0:10,0:10:27.08:0,27,421	0/0:12,0:12:27.09:0,27,400	0/0:8,0:8:21.03:0,21,307	0/0:5,0:5:12.04:0,12,190	0/0:7,0:7:21.07:0,21,324	0/0:6,0:6:15.05:0,15,230	0/0:34,0:34:90.30:0,90,1396	0/0:28,0:28:84.29:0,84,1341	0/1:3,4:10:11.32:114,0,11	1/1:5,5:11:5.27:144,5,0	1/1:5,1:8:17.15:114,17,0	0/0:4,0:4:9.03:0,9,143	0/0:11,0:11:30.10:0,30,478	0/0:10,0:10:24.08:0,24,353	0/0:17,0:17:33.58:0,34,518	0/0:17,0:17:48.16:0,48,747	1/1:2,6:13:17.74:125,18,0	0/0:9,0:9:27.09:0,27,421
chr10	106417184	.	TA	T	521.37	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.413;DP=359;FS=13.773;HRun=1;HaplotypeScore=49.2951;InbreedingCoeff=0.8342;MQ=58.72;MQ0=4;MQRankSum=-5.004;QD=9.48;ReadPosRankSum=-0.046;VQSLOD=-0.4156;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.26:0,78,1224	0/0:3,0:3:9.03:0,9,133	0/0:12,0:3:3.01:0,3,44	0/0:12,0:11:24.04:0,24,329	0/0:16,0:16:45.15:0,45,697	0/0:21,0:21:45.15:0,45,707	0/0:8,0:8:18.06:0,18,285	1/1:8,4:11:0.17:129,0,0	0/0:9,0:9:24.08:0,24,363	0/0:16,0:16:44.88:0,45,676	0/0:10,0:10:27.09:0,27,431	0/0:13,0:13:27.09:0,27,398	0/0:8,0:8:21.07:0,21,324	0/0:5,0:5:12.04:0,12,189	0/0:7,0:7:21.07:0,21,324	0/0:6,0:6:15.05:0,15,230	0/0:36,0:36:96.32:0,96,1470	0/0:28,0:28:84.29:0,84,1338	1/1:6,4:10:8.49:127,8,0	1/1:7,5:12:14.68:155,15,0	1/1:7,1:8:17.67:122,18,0	0/0:3,0:3:9.03:0,9,141	0/0:12,0:12:36.08:0,36,534	0/0:9,0:9:24.08:0,24,353	0/0:15,0:15:36.51:0,37,518	0/0:18,0:18:51.17:0,51,784	1/1:6,7:13:21.89:146,22,0	0/0:9,0:9:27.09:0,27,419
chr10	106419569	.	GACC	G	3967.80	PASS	AB=0.913;AC=12;AF=0.214;AN=56;BaseQRankSum=11.600;DP=629;FS=0.878;HRun=0;HaplotypeScore=92.3728;InbreedingCoeff=0.7810;MQ=69.06;MQ0=0;MQRankSum=-1.576;QD=22.04;ReadPosRankSum=0.330;VQSLOD=3.2442;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,102,2054	0/0:11,0:11:24.08:0,24,479	0/0:12,0:10:15.05:0,15,242	0/0:21,0:19:29.69:0,30,531	0/0:11,0:11:24.08:0,24,483	0/0:16,0:16:33.11:0,33,672	0/0:30,0:30:57.18:0,57,1125	1/1:12,18:30:48.11:649,48,0	0/0:32,0:32:72.24:0,72,1456	0/0:18,0:18:30.10:0,30,595	0/0:8,0:8:15.52:0,16,304	0/0:28,0:28:69.24:0,69,1400	0/0:24,0:24:57.18:0,57,1115	0/0:27,0:27:63.22:0,63,1285	0/0:27,0:27:57.20:0,57,1145	0/0:15,0:15:39.13:0,39,783	0/0:28,0:28:75.26:0,75,1529	0/0:37,0:37:78.23:0,78,1531	1/1:10,8:18:24.08:342,24,0	1/1:4,8:12:27.09:389,27,0	1/1:13,55:68:99:1980,138,0	0/0:10,0:10:27.09:0,27,538	0/0:10,0:10:24.02:0,24,468	0/0:31,0:31:72.25:0,72,1469	0/1:8,1:9:25.12:25,0,288	0/1:23,2:25:22.24:22,0,1031	1/1:3,15:18:39.13:561,39,0	0/0:10,0:10:30.10:0,30,595
chr10	106420390	.	G	GTT	3514.60	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-9.603;DP=599;FS=4.919;HRun=10;HaplotypeScore=74.5066;InbreedingCoeff=0.9547;MQ=51.31;MQ0=30;MQRankSum=-2.512;QD=27.67;ReadPosRankSum=-4.246;VQSLOD=2.8570;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:39:75.12:0,75,762	0/0:5,0:5:12.02:0,12,122	0/0:11,0:5:12.84:0,13,103	0/0:11,0:2:6.01:0,6,60	0/0:31,0:32:55.83:0,56,577	0/0:27,0:27:42.09:0,42,427	0/0:17,0:17:45.08:0,45,457	1/1:8,31:37:90.14:1191,90,0	0/0:18,0:18:21.04:0,21,213	0/0:22,0:22:51.08:0,51,518	0/0:14,0:13:24.02:0,24,244	0/0:19,0:19:30.01:0,30,305	0/0:23,0:23:52.29:0,52,519	0/0:14,0:14:15.02:0,15,153	0/0:24,0:24:42.04:0,42,420	0/0:20,0:18:23.23:0,23,243	0/0:31,0:31:54.10:0,54,548	0/0:15,0:16:24.04:0,24,244	1/1:13,18:31:59.37:825,59,0	1/1:2,16:18:30.10:441,30,0	1/1:4,8:10:18.06:268,18,0	0/0:22,0:22:45.08:0,45,458	0/0:25,0:25:33.05:0,33,334	0/0:19,0:17:33.07:0,33,334	0/0:14,0:14:27:0,27,271	0/0:29,0:29:72.07:0,72,721	1/1:1,23:25:56.64:790,57,0	0/0:17,0:14:27.04:0,27,274
chr10	106420865	.	GGTTTGTTTGTTTGTTT	G	1372.71	PASS	AB=0.925;AC=7;AF=0.130;AN=54;BaseQRankSum=8.457;DP=758;FS=0.000;HRun=0;HaplotypeScore=320.2491;InbreedingCoeff=0.3845;MQ=58.48;MQ0=10;MQRankSum=-4.086;QD=11.54;ReadPosRankSum=-1.476;VQSLOD=1.5392;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,105,5547	1/1:4,8:12:9.03:298,9,0	./.	0/0:20,0:17:5.97:0,6,132	0/0:13,0:22:39.12:0,39,1056	0/0:22,0:22:33.11:0,33,2114	0/0:31,0:31:45.14:0,45,2349	0/0:34,0:29:3.29:0,3,150	0/0:34,0:34:81.28:0,81,5156	0/0:29,0:31:69.22:0,69,4048	0/0:20,0:20:33.08:0,33,1733	0/0:25,0:25:45.15:0,45,2731	0/0:21,0:21:45.15:0,45,2650	0/0:23,0:23:42.14:0,42,2371	0/0:36,0:36:78.25:0,78,4674	0/0:17,0:16:30.10:0,30,1571	0/0:42,0:41:72.22:0,72,4261	0/0:19,0:19:48.15:0,48,2648	1/1:18,0:15:5.86:40,6,0	0/1:22,9:31:99:504,0,115	0/1:41,0:41:95.52:157,0,96	0/0:25,0:25:42.14:0,42,2482	0/0:24,0:24:51.16:0,51,2963	0/0:62,0:62:99:0,138,8706	0/0:16,0:16:30.10:0,30,1750	0/0:33,0:34:57.20:0,57,3387	0/1:17,0:17:99:503,0,122	0/0:12,0:12:24.08:0,24,1659
chr10	106420870	.	GTTTGTTTGTTT	G	1671.73	PASS	AB=0.897;AC=5;AF=0.089;AN=56;BaseQRankSum=10.558;DP=753;FS=4.666;HRun=0;HaplotypeScore=240.8078;InbreedingCoeff=-0.0948;MQ=57.76;MQ0=11;MQRankSum=-5.268;QD=12.48;ReadPosRankSum=-1.144;VQSLOD=1.9897;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,5205	0/1:12,0:12:99:126,0,137	0/0:21,0:13:39.07:0,39,570	0/0:18,0:14:33.28:0,33,552	0/0:20,0:20:60.18:0,60,1151	0/0:16,0:16:48.16:0,48,1826	0/0:37,0:37:99:0,111,3198	0/1:33,0:28:29.93:30,0,216	0/0:36,0:36:99:0,108,4588	0/0:33,0:33:96.30:0,96,3639	0/0:19,0:19:57.16:0,57,1643	0/0:25,0:25:75.22:0,75,2538	0/0:22,0:22:66.22:0,66,2435	0/0:22,0:22:66.22:0,66,2260	0/0:38,0:38:99:0,114,4280	0/0:16,0:15:48.16:0,48,1607	0/0:39,0:38:99:0,114,3940	0/0:18,0:18:54.16:0,54,2192	0/0:17,0:14:32.72:0,33,163	0/1:21,7:28:78.69:642,0,79	0/1:37,2:39:56.98:57,0,413	0/0:27,0:26:78.26:0,78,2542	0/0:24,0:24:58.25:0,58,2584	0/0:59,0:59:99:0,177,7322	0/0:17,0:17:51.15:0,51,1740	0/0:34,0:34:99:0,102,3415	0/1:14,8:22:21.06:935,0,21	0/0:12,0:12:33.11:0,33,1416
chr10	106422251	.	TACACAC	T	260.62	PASS	AC=8;AF=0.160;AN=50;BaseQRankSum=2.221;DP=469;FS=6.230;HRun=0;HaplotypeScore=129.3203;InbreedingCoeff=0.6372;MQ=47.45;MQ0=18;MQRankSum=-4.310;QD=5.43;ReadPosRankSum=-1.143;VQSLOD=1.5812;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:11.99:0,12,175	./.	0/0:21,0:2:3.01:0,3,63	./.	0/0:11,0:10:5.97:0,6,116	0/0:18,0:18:15.05:0,15,433	0/0:26,0:26:9.03:0,9,223	1/1:18,0:16:2.80:20,3,0	0/0:18,0:18:21.04:0,21,457	0/0:19,0:17:21.07:0,21,560	0/0:6,0:8:2.03:0,2,24	0/0:24,0:23:36.11:0,36,878	0/0:24,0:24:21.07:0,21,580	0/0:16,0:16:24.08:0,24,651	0/0:26,0:26:24.51:0,25,529	0/0:17,0:17:21.06:0,21,574	0/0:17,0:17:27.04:0,27,572	0/0:19,0:20:34.36:0,34,875	1/1:9,2:10:6.02:122,6,0	./.	0/0:8,0:7:0.47:0,0,1	0/0:17,0:16:9.01:0,9,170	1/1:7,0:6:0.47:2,0,0	0/0:33,0:31:48.10:0,48,1126	0/0:14,0:14:15.52:0,16,427	0/0:19,0:18:24.54:0,25,477	1/1:7,5:12:12.04:232,12,0	0/0:7,0:6:12.04:0,12,337
chr10	106422547	.	ATCC	A	526.83	PASS	AB=0.801;AC=8;AF=0.143;AN=56;BaseQRankSum=7.048;DP=456;FS=49.394;HRun=0;HaplotypeScore=100.9429;InbreedingCoeff=-0.1686;MQ=65.51;MQ0=1;MQRankSum=-6.525;QD=6.59;ReadPosRankSum=0.900;VQSLOD=0.5536;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:71.96:0,72,1449	0/1:4,2:6:79.72:80,0,249	0/0:23,0:22:59.01:0,59,1194	0/0:28,0:28:69.23:0,69,1420	0/0:10,0:10:24.08:0,24,533	0/0:12,0:12:27.09:0,27,576	0/0:19,0:19:48.16:0,48,1071	0/0:16,0:16:42.12:0,42,856	0/0:19,0:19:48.11:0,48,1023	0/1:17,2:19:43.69:44,0,976	0/1:5,2:7:76.69:77,0,293	0/0:24,0:24:63.22:0,63,1396	0/0:11,0:11:33.11:0,33,734	0/0:17,0:17:48.16:0,48,1056	0/0:20,0:20:57.13:0,57,1216	0/0:16,0:16:45.15:0,45,1004	0/0:21,2:22:11.28:0,11,1166	0/0:17,0:17:45.15:0,45,1005	0/0:15,0:15:27.09:0,27,599	0/0:14,0:14:39.09:0,39,801	0/0:29,0:29:72.19:0,72,1507	0/1:5,2:7:79.70:80,0,231	0/1:5,1:6:30.83:31,0,276	0/0:22,0:22:54:0,54,1020	0/1:5,2:7:76.73:77,0,310	0/1:16,2:18:49.35:49,0,843	0/0:12,0:12:24.08:0,24,534	0/1:5,5:10:48.95:226,0,49
chr10	106423236	.	CTT	C	793.84	PASS	AB=0.729;AC=10;AF=0.179;AN=56;BaseQRankSum=2.491;DP=505;FS=4.455;HRun=17;HaplotypeScore=72.9492;InbreedingCoeff=0.6880;MQ=57.69;MQ0=22;MQRankSum=1.041;QD=8.18;ReadPosRankSum=-0.519;VQSLOD=0.7645;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:36:78.36:0,78,826	0/0:2,0:3:2.37:0,2,9	0/0:23,0:7:12.43:0,12,82	0/0:21,0:9:5.99:0,6,51	0/0:14,0:14:37.90:0,38,380	0/0:14,1:17:7.91:0,8,218	0/0:19,0:23:40.63:0,41,363	1/1:11,13:26:28.19:290,28,0	0/0:15,0:13:19.59:0,20,217	0/1:14,1:17:5.56:6,0,235	0/0:10,1:15:21.09:0,21,166	0/0:15,0:16:40.57:0,41,392	0/0:11,0:13:30:0,30,308	0/0:7,0:9:26.45:0,26,255	0/0:11,0:10:0.33:0,0,165	0/0:13,0:15:32.44:0,32,364	0/0:28,0:31:41.97:0,42,633	0/0:30,0:27:61.84:0,62,694	1/1:7,11:19:34.56:268,35,0	1/1:9,9:17:26.37:211,26,0	0/1:2,4:5:3.93:80,0,4	0/0:9,0:10:16.76:0,17,154	0/0:17,0:18:38.89:0,39,439	0/0:23,1:24:20.75:0,21,394	0/0:20,0:19:43.83:0,44,454	0/0:20,1:23:44.36:0,44,457	1/1:3,5:8:11.20:101,11,0	0/0:7,0:9:23.43:0,23,255
chr10	106423781	.	T	TAA	1203.96	PASS	AB=0.832;AC=12;AF=0.214;AN=56;BaseQRankSum=0.897;DP=525;FS=3.117;HRun=14;HaplotypeScore=76.4843;InbreedingCoeff=0.5271;MQ=63.30;MQ0=14;MQRankSum=-1.285;QD=5.28;ReadPosRankSum=-2.568;VQSLOD=-0.4243;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:29:53.90:0,54,427	0/1:2,0:8:11.99:12,0,37	0/1:62,0:18:2.50:2,0,141	0/1:60,0:19:9.49:9,0,58	0/0:24,0:25:34.33:0,34,255	0/0:7,1:7:16.86:0,17,127	0/0:8,0:8:4.93:0,5,74	1/1:24,3:27:24:279,24,0	0/0:14,0:15:11.86:0,12,137	0/0:14,0:16:26.51:0,27,250	0/0:18,0:19:5.73:0,6,187	0/0:13,0:13:5.81:0,6,131	0/0:6,0:6:11.61:0,12,80	0/0:4,0:4:5.98:0,6,50	0/0:15,0:16:32.21:0,32,297	0/0:14,0:14:35.83:0,36,297	0/0:21,0:24:59.36:0,59,464	0/0:19,0:23:31.69:0,32,309	0/1:19,5:26:1.86:268,0,2	1/1:6,5:11:23.56:231,24,0	1/1:0,5:5:9.03:118,9,0	0/0:4,0:4:8.98:0,9,75	0/0:11,0:12:8.95:0,9,117	0/0:6,0:6:2.50:0,3,21	0/0:17,0:18:34.07:0,34,317	0/0:16,0:16:21.41:0,21,239	1/1:12,5:20:44.27:448,44,0	0/0:17,0:18:21.67:0,22,207
chr10	106423988	.	T	TA	4295.48	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-13.992;DP=529;FS=0.836;HRun=3;HaplotypeScore=46.6721;InbreedingCoeff=0.9936;MQ=73.28;MQ0=0;MQRankSum=0.024;QD=35.80;ReadPosRankSum=-0.406;VQSLOD=4.8665;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.13:0,42,503	0/0:7,0:7:18.06:0,18,216	0/0:8,0:8:15.03:0,15,158	0/0:13,0:13:28.25:0,28,276	0/0:31,0:31:87.25:0,87,1032	0/0:27,0:26:78.19:0,78,898	0/0:19,0:19:57.16:0,57,672	1/1:7,33:40:99:1315,99,0	0/0:21,0:21:57.16:0,57,672	0/0:21,0:21:60.18:0,60,720	0/0:15,0:15:39.10:0,39,455	0/0:21,0:21:57.16:0,57,672	0/0:17,0:17:48.13:0,48,564	0/0:14,0:14:39.12:0,39,467	0/0:20,0:20:60.17:0,60,708	0/0:18,0:18:54.15:0,54,636	0/0:19,0:19:54.12:0,54,618	0/0:23,0:23:66.20:0,66,791	1/1:0,13:13:39.13:546,39,0	1/1:0,15:15:39.13:545,39,0	1/1:1,15:16:42.14:588,42,0	0/0:11,0:11:33.10:0,33,395	0/0:23,0:23:66.20:0,66,782	0/0:13,0:13:33.08:0,33,383	0/0:8,0:8:24.07:0,24,288	0/0:26,0:26:78.23:0,78,926	1/1:0,36:36:93.31:1301,93,0	0/0:19,0:19:45.14:0,45,540
chr10	106424571	.	AAAG	A	1014.36	PASS	AB=0.733;AC=6;AF=0.107;AN=56;BaseQRankSum=-0.262;DP=249;FS=4.144;HRun=0;HaplotypeScore=65.7047;InbreedingCoeff=0.2064;MQ=57.93;MQ0=0;MQRankSum=-2.846;QD=21.13;ReadPosRankSum=0.466;VQSLOD=2.7797;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.18:0,54,983	0/0:5,0:5:15.04:0,15,257	0/0:4,0:3:5.98:0,6,85	0/0:5,0:2:8.77:0,9,76	0/0:12,0:12:33.07:0,33,526	0/0:12,0:12:33.10:0,33,576	0/0:9,0:9:24.07:0,24,447	0/1:8,13:21:99:580,0,203	0/0:13,0:13:33.11:0,33,614	0/0:15,0:15:41.18:0,41,707	0/0:7,0:7:21.07:0,21,391	0/0:3,0:3:9.03:0,9,140	0/0:7,0:7:4.67:0,5,262	0/0:3,0:3:9.03:0,9,145	0/0:10,0:9:24.06:0,24,420	0/0:10,0:10:27.08:0,27,467	0/0:14,0:13:36.10:0,36,630	0/0:7,0:7:15.05:0,15,275	0/1:10,3:13:99:240,0,208	0/1:3,3:5:2.95:150,0,3	1/1:1,2:2:5.93:65,6,0	0/0:4,0:4:12.04:0,12,239	0/0:4,0:4:12.04:0,12,242	0/0:4,0:4:6.02:0,6,81	0/0:14,0:12:30.10:0,30,592	0/0:12,0:11:36.11:0,36,611	0/1:4,1:5:22.09:100,0,22	0/0:7,0:7:21.07:0,21,369
chr10	106424574	.	G	GA	614.51	PASS	AB=0.891;AC=9;AF=0.161;AN=56;BaseQRankSum=0.721;DP=263;FS=0.000;HRun=9;HaplotypeScore=64.1484;InbreedingCoeff=0.2878;MQ=61.46;MQ0=0;MQRankSum=-3.347;QD=8.66;ReadPosRankSum=-0.925;VQSLOD=1.3674;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:53.99:0,54,468	0/0:5,0:5:11.98:0,12,104	0/0:5,0:4:8.97:0,9,71	0/0:6,0:3:8.93:0,9,69	0/1:11,1:12:0.65:1,0,204	0/0:13,0:13:29.98:0,30,260	0/0:10,0:10:20.96:0,21,178	0/1:21,0:21:7.57:327,0,8	0/0:14,0:14:26.97:0,27,234	0/0:16,0:16:38.57:0,39,336	0/0:7,0:7:21:0,21,182	0/0:3,0:3:2.99:0,3,26	0/1:6,1:7:12.14:12,0,134	0/0:5,0:5:8.98:0,9,78	0/0:10,0:9:20.98:0,21,182	0/0:11,0:11:20.97:0,21,182	0/0:14,0:13:35.99:0,36,312	0/0:7,0:7:15:0,15,130	0/1:11,3:14:16.81:147,0,17	1/1:8,0:7:14.98:128,15,0	1/1:4,0:3:5.99:52,6,0	0/0:4,0:4:12:0,12,104	0/0:4,0:4:8.99:0,9,78	0/0:4,0:4:5.79:0,6,52	0/0:13,1:12:29.99:0,30,260	0/0:12,0:11:35.99:0,36,312	0/1:4,1:5:13.37:84,0,13	0/0:7,0:7:17.99:0,18,156
chr10	106424821	.	ATG	A	2518.79	PASS	AB=0.956;AC=49;AF=0.875;AN=56;BaseQRankSum=4.881;DP=542;FS=0.000;HRun=0;HaplotypeScore=218.9082;InbreedingCoeff=-0.0068;MQ=61.72;MQ0=0;MQRankSum=-13.832;QD=4.80;ReadPosRankSum=4.876;VQSLOD=2.6730;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:46,0:43:36.37:220,36,0	1/1:4,0:4:4.54:20,5,0	0/1:10,1:11:18.64:33,0,19	0/1:16,3:18:6.10:141,0,6	1/1:19,0:19:4.54:113,5,0	1/1:23,0:23:35.14:145,35,0	1/1:15,0:15:23.94:103,24,0	0/1:45,0:45:41.36:57,0,41	1/1:25,0:25:40.77:166,41,0	1/1:15,0:15:0.61:49,1,0	1/1:12,0:12:20.58:102,21,0	1/1:14,0:14:16.50:87,17,0	1/1:26,0:26:8.42:134,8,0	1/1:16,0:16:13.07:103,13,0	1/1:21,0:20:35.09:144,35,0	1/1:36,0:35:23.90:194,24,0	1/1:17,0:17:4.59:69,5,0	0/1:14,0:14:10.72:29,0,11	0/0:17,0:17:0.50:0,0,76	1/1:18,0:18:28.28:108,28,0	0/1:18,0:18:12.17:27,0,12	1/1:11,0:11:10.60:69,11,0	1/1:10,0:10:15.82:98,16,0	1/1:17,0:17:23.75:114,24,0	1/1:13,0:13:21.19:97,21,0	1/1:36,0:36:19.07:92,19,0	1/1:21,0:21:23.60:110,24,0	1/1:3,0:3:6.27:20,6,0
chr10	106424829	.	T	TC	13763.56	PASS	AB=1.000;AC=54;AF=0.964;AN=56;BaseQRankSum=0.437;DP=537;FS=0.000;HRun=1;HaplotypeScore=168.6237;InbreedingCoeff=-0.0405;MQ=56.45;MQ0=0;MQRankSum=-4.943;QD=25.63;ReadPosRankSum=3.849;VQSLOD=4.6893;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:46,0:43:99:1040,106,0	1/1:5,0:5:11.99:112,12,0	0/1:11,0:10:49:49,0,128	0/1:17,0:16:99:181,0,141	1/1:17,0:17:36.07:357,36,0	1/1:20,0:20:57.12:580,57,0	1/1:17,0:18:33.06:351,33,0	1/1:38,5:43:99:1310,123,0	1/1:24,0:24:69.15:725,69,0	1/1:18,0:18:47.94:479,48,0	1/1:14,0:14:36.08:378,36,0	1/1:16,0:16:44.94:459,45,0	1/1:25,0:26:75.10:744,75,0	1/1:16,0:16:48.10:501,48,0	1/1:21,0:20:60.09:616,60,0	1/1:31,0:30:90.19:931,90,0	1/1:16,0:16:42.09:435,42,0	1/1:13,0:13:33.06:332,33,0	1/1:15,0:15:32.29:331,32,0	1/1:16,0:16:36.07:364,36,0	1/1:15,0:15:27.42:255,27,0	1/1:10,0:10:24.84:258,25,0	1/1:11,0:11:30:308,30,0	1/1:18,0:18:39.04:395,39,0	1/1:16,0:16:34.32:347,34,0	1/1:36,1:37:99:1091,107,0	1/1:24,0:24:69.17:741,69,0	1/1:3,0:3:9.02:92,9,0
chr10	106425029	.	GCA	G	1128.85	PASS	AB=0.864;AC=18;AF=0.333;AN=54;BaseQRankSum=5.199;DP=585;FS=10.723;HRun=0;HaplotypeScore=79.9824;InbreedingCoeff=-0.3497;MQ=65.57;MQ0=18;MQRankSum=-0.058;QD=3.14;ReadPosRankSum=-0.243;VQSLOD=0.7979;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,5:47:24.84:0,25,646	0/0:4,0:9:6.01:0,6,71	./.	0/0:29,0:13:0:0,0,0	0/0:10,0:16:13.93:0,14,136	0/1:12,0:15:1.18:1,0,260	0/1:25,3:28:89.90:90,0,325	0/1:15,1:16:30.51:33,0,31	0/1:16,1:17:5.78:6,0,284	0/0:9,0:8:9.01:0,9,98	0/1:12,2:14:14.42:14,0,159	0/1:14,5:19:5.88:6,0,284	0/1:11,4:15:68.41:68,0,252	0/1:21,1:22:46.18:46,0,255	0/1:16,3:21:99:100,0,336	0/1:18,3:21:62.70:63,0,355	0/0:16,0:18:10.41:0,10,299	0/0:19,1:21:0.11:0,0,348	0/1:13,3:16:52.85:78,0,53	0/1:9,5:16:26.04:136,0,26	0/1:29,17:46:21.21:166,0,21	0/0:17,0:16:14.03:0,14,262	0/1:17,1:18:19.16:28,0,19	0/1:29,2:32:11.68:12,0,565	0/1:14,2:16:41.79:42,0,230	0/0:20,0:20:2.29:0,2,291	1/1:14,11:25:29.91:388,30,0	0/0:3,0:3:9.01:0,9,101
chr10	106428194	.	TCC	T	2175.31	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.113;DP=490;FS=8.400;HRun=4;HaplotypeScore=69.6197;InbreedingCoeff=0.9495;MQ=64.32;MQ0=20;MQRankSum=-1.968;QD=26.86;ReadPosRankSum=0.505;VQSLOD=1.6947;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:93.27:0,93,1597	0/0:1,0:3:3:0,3,28	0/0:33,0:16:39.04:0,39,547	0/0:36,0:19:34.44:0,34,478	0/0:22,0:21:51.17:0,51,905	0/0:16,0:15:45.10:0,45,719	0/0:28,0:28:69.03:0,69,1217	1/1:2,17:17:42.14:611,42,0	0/0:0,0:7:12.01:0,12,111	0/0:27,0:27:78.22:0,78,1317	0/0:17,0:16:39.13:0,39,703	0/0:14,0:14:42.14:0,42,753	0/0:7,0:7:21.07:0,21,373	0/0:6,0:6:18.06:0,18,317	0/0:10,0:9:24.08:0,24,430	0/0:17,0:17:51.17:0,51,919	0/0:17,0:17:51.13:0,51,884	0/0:17,0:16:48.16:0,48,825	1/1:4,11:14:33.11:477,33,0	1/1:4,14:17:30.10:436,30,0	1/1:1,11:12:27.09:388,27,0	0/0:15,0:15:30.05:0,30,481	0/0:10,0:9:27.09:0,27,478	0/0:18,0:18:54.14:0,54,922	0/0:15,0:15:42.14:0,42,752	0/0:24,0:22:60.20:0,60,1031	1/1:6,11:13:30.10:437,30,0	0/0:12,0:12:33.04:0,33,512
chr10	106434471	.	A	AG	4971.76	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-12.894;DP=715;FS=3.728;HRun=4;HaplotypeScore=68.7796;InbreedingCoeff=0.9957;MQ=89.09;MQ0=0;MQRankSum=-3.067;QD=34.53;ReadPosRankSum=-1.970;VQSLOD=4.6913;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,99,1122	0/0:10,0:10:27.08:0,27,306	0/0:27,0:27:69.17:0,69,758	0/0:25,0:25:63.06:0,63,669	0/0:11,0:11:30.07:0,30,329	0/0:20,0:20:57.12:0,57,632	0/0:26,0:26:75.20:0,75,840	1/1:1,26:27:75.24:1007,75,0	0/0:30,0:30:84.17:0,84,906	0/0:26,0:26:78.17:0,78,859	0/0:6,0:6:15.04:0,15,170	0/0:28,0:28:75.20:0,75,841	0/0:30,0:30:81.23:0,81,918	0/0:25,0:25:72.19:0,72,807	0/0:36,0:36:99:0,105,1191	0/0:29,0:29:81.21:0,81,901	0/0:52,0:52:99:0,153,1735	0/0:23,0:23:57.15:0,57,638	1/1:3,18:21:54.08:665,54,0	1/1:1,10:11:27.05:347,27,0	1/1:4,55:59:99:2092,154,0	0/0:17,0:17:45.13:0,45,510	0/0:15,0:15:42.12:0,42,476	0/0:26,0:26:72.19:0,72,806	0/0:17,0:17:42.12:0,42,476	0/0:38,0:38:99:0,105,1184	1/1:2,24:26:63.21:861,63,0	0/0:16,0:16:45.13:0,45,509
chr10	106434875	.	C	CG	4524.20	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.254;DP=571;FS=0.396;HRun=1;HaplotypeScore=62.6882;InbreedingCoeff=0.9822;MQ=82.73;MQ0=0;MQRankSum=-1.512;QD=36.49;ReadPosRankSum=-0.878;VQSLOD=4.6212;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.29:0,93,1191	0/0:3,0:3:9:0,9,100	0/0:18,0:18:53.72:0,54,586	0/0:22,0:22:50.71:0,51,585	0/0:18,0:18:48.05:0,48,597	0/0:11,0:11:29.98:0,30,337	0/0:35,0:35:99:0,99,1252	1/1:0,18:18:54.01:702,54,0	0/0:22,0:22:63.18:0,63,789	0/0:9,0:9:24.08:0,24,311	0/0:5,0:5:15.04:0,15,177	0/0:22,0:22:63.04:0,63,761	0/0:12,0:12:36.12:0,36,466	0/0:15,0:15:42.09:0,42,509	0/0:22,0:22:66.21:0,66,843	0/0:24,0:24:72.20:0,72,914	0/0:32,0:32:93.24:0,93,1170	0/0:36,0:36:99:0,99,1206	1/1:1,16:17:48.14:687,48,0	1/1:2,15:17:42.14:618,42,0	1/1:2,50:52:99:1770,120,0	0/0:18,0:18:54.17:0,54,686	0/0:14,0:14:42.14:0,42,542	0/0:35,0:35:99:0,99,1264	0/0:13,0:13:36.03:0,36,415	0/0:17,0:17:48.06:0,48,572	1/1:1,19:20:51.16:747,51,0	0/0:12,0:12:33.04:0,33,405
chr10	106436235	.	TAC	T	194.16	PASS	AB=0.905;AC=9;AF=0.180;AN=50;BaseQRankSum=3.079;DP=545;FS=7.637;HRun=0;HaplotypeScore=154.0453;InbreedingCoeff=-0.0921;MQ=62.15;MQ0=5;MQRankSum=1.737;QD=1.03;ReadPosRankSum=1.184;VQSLOD=1.8549;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,3:32:8.27:8,0,245	1/1:5,0:6:2.84:14,3,0	./.	./.	0/0:13,0:13:12:0,12,134	0/0:16,0:16:18.03:0,18,225	0/1:30,6:36:99:130,0,190	0/0:27,0:26:4.26:0,4,42	0/0:17,0:17:24.06:0,24,329	0/1:23,1:24:16.93:17,0,278	0/0:10,0:10:6.02:0,6,87	0/0:15,0:14:11.98:0,12,132	0/0:13,0:13:12.04:0,12,173	0/0:13,1:14:12.01:0,12,157	0/1:19,2:22:46.58:47,0,137	0/1:16,1:18:30.80:31,0,219	0/0:26,0:26:27:0,27,313	0/0:21,0:21:24.04:0,24,301	0/0:11,0:10:9.02:0,9,105	0/0:14,0:20:11.96:0,12,97	0/0:31,0:34:21.02:0,21,222	0/0:7,0:7:6:0,6,68	0/1:12,2:14:47.22:47,0,103	0/1:33,2:35:28.69:29,0,354	0/0:12,0:12:9.03:0,9,133	./.	0/0:19,0:19:15.02:0,15,166	0/0:10,0:10:3.01:0,3,41
chr10	106436472	.	AG	A	359.25	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.525;DP=756;FS=1.026;HRun=1;HaplotypeScore=86.0460;InbreedingCoeff=0.9986;MQ=64.54;MQ0=3;MQRankSum=-0.554;QD=27.63;ReadPosRankSum=2.151;VQSLOD=3.5946;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,111,1450	1/1:0,13:13:33.11:454,33,0	0/0:21,0:21:49.12:0,49,598	0/0:15,0:13:30.07:0,30,382	0/0:31,0:31:84.22:0,84,1123	0/0:22,0:22:63.16:0,63,842	0/0:29,0:29:87.12:0,87,1112	0/0:60,0:58:99:0,168,2088	0/0:21,0:21:57.16:0,57,776	0/0:43,0:43:99:0,123,1598	0/0:32,0:32:90.24:0,90,1208	0/0:22,0:22:59.84:0,60,777	0/0:10,0:10:30.07:0,30,392	0/0:27,0:27:75.10:0,75,913	0/0:33,0:33:78.19:0,78,1023	0/0:20,0:20:51.03:0,51,625	0/0:41,0:40:99:0,111,1447	0/0:18,0:18:45.12:0,45,602	0/0:29,0:29:78.16:0,78,988	0/0:22,0:22:48.10:0,48,609	0/0:25,0:25:65.85:0,66,736	0/0:16,0:16:45.11:0,45,579	0/0:29,0:29:66.02:0,66,881	0/0:33,0:33:80.03:0,80,1028	0/0:24,0:24:69.19:0,69,920	0/0:38,0:38:99:0,109,1333	0/0:21,0:20:39.73:0,40,587	0/0:17,0:17:48.05:0,48,602
chr10	106436637	.	A	AACAC	253.79	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.940;DP=840;FS=13.069;HRun=0;HaplotypeScore=149.8600;InbreedingCoeff=0.9838;MQ=71.21;MQ0=3;MQRankSum=-0.187;QD=25.38;ReadPosRankSum=-2.570;VQSLOD=2.1762;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,111,1972	1/1:4,6:10:15.05:342,15,0	0/0:39,0:31:64.69:0,65,927	0/0:50,0:42:69.23:0,69,1222	0/0:15,0:14:39.13:0,39,719	0/0:31,0:31:81.23:0,81,1439	0/0:34,0:34:96.28:0,96,1639	0/0:33,0:33:78.22:0,78,1257	0/0:36,0:36:93.28:0,93,1631	0/0:42,0:42:99:0,117,2020	0/0:12,0:12:36.11:0,36,633	0/0:31,0:31:84.27:0,84,1478	0/0:18,0:18:51.16:0,51,924	0/0:37,0:37:93.24:0,93,1629	0/0:38,0:38:99:0,111,1876	0/0:32,0:32:87.26:0,87,1534	0/0:35,0:35:96.27:0,96,1653	0/0:29,0:30:79.71:0,80,1429	0/0:32,0:31:90.22:0,90,1400	0/0:20,0:20:54.19:0,54,995	0/0:47,0:46:99:0,123,2071	0/0:21,0:21:57.14:0,57,951	0/0:18,0:18:45.14:0,45,817	0/0:39,0:39:99:0,105,1805	0/0:15,0:15:41.05:0,41,636	0/0:34,0:34:99:0,102,1737	0/0:23,0:23:58.67:0,59,986	0/0:22,0:22:66.20:0,66,1217
chr10	106523197	.	T	TA	10439.29	PASS	AB=0.702;AC=50;AF=0.893;AN=56;BaseQRankSum=-0.297;DP=548;FS=4.903;HRun=10;HaplotypeScore=265.9651;InbreedingCoeff=0.5484;MQ=50.79;MQ0=0;MQRankSum=-1.408;QD=19.73;ReadPosRankSum=1.970;VQSLOD=1.5235;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,18:27:53.96:534,54,0	1/1:4,3:7:14.96:138,15,0	0/0:11,0:8:8.95:0,9,71	0/0:8,0:7:8.02:0,8,54	0/1:13,5:18:23.97:126,0,24	1/1:5,19:24:40.87:537,41,0	1/1:3,21:22:48.05:491,48,0	1/1:11,11:21:33.06:341,33,0	1/1:15,17:32:38.43:588,38,0	1/1:11,10:21:35.85:382,36,0	1/1:0,15:15:38.28:359,38,0	0/1:9,14:23:19.64:382,0,20	1/1:1,19:20:58.82:577,59,0	1/1:8,25:33:41.88:606,42,0	1/1:7,30:37:99:1015,102,0	1/1:8,13:21:36.56:495,37,0	1/1:7,11:18:24.27:351,24,0	1/1:6,11:17:32.95:332,33,0	1/1:8,9:17:30.07:314,30,0	1/1:11,10:21:23.24:372,23,0	1/1:8,6:13:10.27:97,10,0	1/1:0,14:14:35.92:333,36,0	1/1:1,14:16:33:331,33,0	1/1:5,15:20:26.53:240,27,0	1/1:1,16:17:32.86:300,33,0	1/1:1,23:24:66.17:701,66,0	1/1:7,8:15:27.03:274,27,0	1/1:2,10:12:21.05:224,21,0
chr10	106523216	.	CT	C	8958.94	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.331;DP=388;FS=1.763;HRun=2;HaplotypeScore=237.8785;InbreedingCoeff=0.7479;MQ=47.64;MQ0=0;MQRankSum=-3.775;QD=23.89;ReadPosRankSum=3.066;VQSLOD=4.5516;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:24.08:310,24,0	1/1:0,4:4:12.04:155,12,0	0/0:7,0:6:11.93:0,12,130	0/0:5,0:4:3:0,3,25	1/1:0,8:8:9.03:116,9,0	1/1:2,17:19:39.11:488,39,0	1/1:3,16:17:27.07:333,27,0	1/1:1,4:4:9.03:117,9,0	1/1:1,20:21:39.13:505,39,0	1/1:2,12:14:33.11:428,33,0	1/1:3,11:14:18.04:218,18,0	1/1:3,15:18:30.09:377,30,0	1/1:0,18:18:45.15:581,45,0	1/1:2,21:23:51.16:651,51,0	1/1:2,30:32:57.19:736,57,0	1/1:1,16:17:39.13:504,39,0	1/1:0,11:11:18.06:233,18,0	1/1:0,15:15:33.11:427,33,0	1/1:1,6:7:18.06:234,18,0	1/1:3,10:13:18.06:233,18,0	1/1:2,5:7:12.04:155,12,0	1/1:0,12:12:21.07:271,21,0	1/1:3,6:9:9.03:116,9,0	1/1:0,19:19:23.69:310,24,0	1/1:3,9:12:15.04:180,15,0	1/1:1,19:20:57.19:738,57,0	1/1:0,13:13:24.08:308,24,0	1/1:0,6:6:18.06:233,18,0
chr10	106523528	.	GAAAAAAAAAAGAACCAAAAAAAAAAAAAA	G	566.78	PASS	AB=0.667;AC=1;AF=0.020;AN=50;BaseQRankSum=2.934;DP=375;FS=2.064;HRun=0;HaplotypeScore=239.9334;InbreedingCoeff=0.0467;MQ=36.68;MQ0=51;MQRankSum=-1.057;QD=47.23;ReadPosRankSum=2.593;VQSLOD=2.7693;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:17:33.07:0,33,2432	0/0:4,0:3:9.03:0,9,742	./.	./.	0/0:13,0:12:15.05:0,15,1215	0/0:16,0:14:42.14:0,42,3703	0/0:20,0:17:42.12:0,42,3599	0/0:20,0:19:48.13:0,48,2735	0/1:6,6:12:12.26:641,0,12	0/0:9,0:6:15.05:0,15,865	0/0:8,0:5:15.05:0,15,1040	0/0:17,0:18:30.55:0,31,2134	0/0:18,0:16:36.10:0,36,2417	0/0:11,0:10:21.05:0,21,1775	0/0:17,0:16:42.14:0,42,3554	0/0:13,0:10:24.06:0,24,2217	0/0:35,0:32:67.82:0,68,5912	0/0:26,0:22:51.15:0,51,4311	0/0:13,0:10:30.08:0,30,1466	0/0:12,0:10:30.09:0,30,1700	./.	0/0:4,0:4:12.04:0,12,1172	0/0:9,0:7:15.05:0,15,1464	0/0:16,0:16:28.84:0,29,2355	0/0:7,0:6:9.03:0,9,787	0/0:15,0:14:24.06:0,24,1798	0/0:12,0:11:23.76:0,24,1435	0/0:16,0:10:21.07:0,21,1900
chr10	106524858	.	T	TGAG	1312.95	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.772;DP=752;FS=0.000;HRun=0;HaplotypeScore=106.4969;InbreedingCoeff=0.9940;MQ=88.41;MQ0=1;MQRankSum=-2.207;QD=54.71;ReadPosRankSum=0.272;VQSLOD=5.3968;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,2242	0/0:9,0:9:24.08:0,24,399	0/0:35,0:34:79.10:0,79,1207	0/0:24,0:24:56.79:0,57,805	0/0:25,0:25:75.26:0,75,1236	0/0:24,0:24:63.22:0,63,1050	0/0:25,0:25:75.23:0,75,1190	0/0:35,0:35:81.26:0,81,1300	1/1:5,19:24:63.22:1408,63,0	0/0:14,0:14:42.14:0,42,698	0/0:24,0:24:60.20:0,60,987	0/0:30,0:30:90.31:0,90,1499	0/0:18,0:18:51.17:0,51,824	0/0:23,0:23:69.19:0,69,1117	0/0:38,0:37:99:0,102,1695	0/0:40,1:41:52.39:0,52,1834	0/0:40,0:40:99:0,114,1894	0/0:21,0:21:63.22:0,63,1049	0/0:28,0:28:72.25:0,72,1197	0/0:21,0:21:63.19:0,63,1000	0/0:37,0:37:96.33:0,96,1577	0/0:18,0:18:51.17:0,51,822	0/0:28,0:28:78.27:0,78,1299	0/0:25,0:25:72.25:0,72,1196	0/0:22,0:22:66.23:0,66,1098	0/0:32,0:32:84.28:0,84,1379	0/0:39,0:39:99:0,114,1892	0/0:7,0:7:21.07:0,21,345
chr10	106527932	.	GAT	G	2234.88	PASS	AB=0.926;AC=21;AF=0.375;AN=56;BaseQRankSum=14.190;DP=962;FS=16.299;HRun=0;HaplotypeScore=276.0033;InbreedingCoeff=-0.4523;MQ=41.69;MQ0=15;MQRankSum=-10.686;QD=3.09;ReadPosRankSum=1.230;VQSLOD=1.1003;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,1:31:8.40:8,0,547	0/1:23,1:24:54.62:55,0,280	0/0:50,0:24:2.17:0,2,429	0/1:60,0:24:99:115,0,213	0/1:25,6:32:84.42:84,0,208	0/1:25,2:27:32.32:32,0,417	0/0:35,1:36:36.30:0,36,698	0/1:44,2:45:99:312,0,459	1/1:25,1:26:25.61:205,26,0	0/1:49,6:54:99:416,0,804	0/1:27,5:32:44.24:44,0,267	0/0:36,2:38:12.30:0,12,873	0/1:27,5:31:99:111,0,488	0/1:32,1:33:23.18:23,0,548	0/1:36,1:38:25.24:25,0,437	0/1:47,3:50:31.65:32,0,704	0/0:13,0:13:13.46:0,13,390	0/0:17,0:17:20.09:0,20,580	0/0:22,0:20:25.10:0,25,465	0/1:39,6:45:99:251,0,320	0/0:39,0:37:33.97:0,34,360	0/1:32,9:41:99:226,0,297	0/1:36,3:40:72.46:72,0,340	0/0:24,0:24:29.10:0,29,644	0/1:29,3:31:96.97:97,0,402	0/1:34,2:36:99:222,0,607	0/1:27,2:30:61.78:62,0,431	0/1:12,0:12:4.43:4,0,444
chr10	106527934	.	T	TAC	1437.14	PASS	AB=0.946;AC=13;AF=0.232;AN=56;BaseQRankSum=2.292;DP=975;FS=5.389;HRun=0;HaplotypeScore=310.2744;InbreedingCoeff=-0.0328;MQ=41.11;MQ0=18;MQRankSum=-5.051;QD=3.44;ReadPosRankSum=-0.983;VQSLOD=1.8925;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:31:40.98:0,41,388	0/1:24,0:24:6.74:7,0,148	0/0:45,0:20:5.95:0,6,51	0/0:59,0:25:3:0,3,30	0/1:30,0:31:4.22:4,0,136	0/1:23,2:26:19.02:19,0,205	0/1:32,1:33:39.70:40,0,288	0/1:45,1:45:19.85:156,0,20	0/1:25,0:26:4.90:6,0,5	0/1:60,0:57:43.31:43,0,464	0/0:32,0:33:12.09:0,12,170	0/0:37,0:37:49.51:0,50,542	0/1:34,0:33:3.85:4,0,330	0/0:32,0:34:21.05:0,21,405	0/0:33,0:37:6.31:0,6,295	0/0:48,0:51:53.38:0,53,520	0/0:13,0:13:21.05:0,21,227	0/0:16,0:19:37.11:0,37,381	0/1:21,3:22:10.81:185,0,11	0/1:36,7:44:7.48:365,0,7	1/1:19,20:38:27.09:412,27,0	0/0:41,0:43:34.11:0,34,283	0/0:38,0:39:15.76:0,16,210	0/0:22,0:24:38.94:0,39,417	0/0:33,0:33:32.10:0,32,304	0/0:40,0:40:11.20:0,11,393	0/1:24,6:30:73.64:345,0,74	0/0:16,0:15:31.16:0,31,322
chr10	106529792	.	GGA	G	242.26	PASS	AB=0.966;AC=13;AF=0.241;AN=54;BaseQRankSum=4.972;DP=765;FS=12.054;HRun=0;HaplotypeScore=97.4742;InbreedingCoeff=-0.1379;MQ=67.31;MQ0=20;MQRankSum=-0.079;QD=0.72;ReadPosRankSum=-1.830;VQSLOD=0.8385;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:51,0:49:13.28:13,0,207	0/0:5,0:5:3.01:0,3,44	./.	0/0:57,0:20:0:0,0,0	0/1:24,0:24:32.38:32,0,55	0/0:16,0:15:10.05:0,10,116	0/0:13,0:20:13.93:0,14,138	0/0:24,0:23:0.47:0,0,1	0/0:22,0:23:9.93:0,10,224	1/1:26,3:29:8.93:95,9,0	0/1:11,2:13:21.54:22,0,35	0/0:35,0:34:6.24:0,6,520	0/1:24,0:24:1.01:1,0,207	0/1:18,1:19:26.50:26,0,30	0/0:22,0:23:3.60:0,4,172	0/0:32,0:32:24.69:0,25,483	0/0:23,0:23:25.22:0,25,347	0/0:20,0:20:32.81:0,33,342	0/0:28,0:28:16.51:0,17,179	0/0:24,0:24:3.46:0,3,24	0/1:45,0:45:10.79:11,0,306	0/1:27,0:27:13.61:14,0,171	0/0:16,0:16:9.03:0,9,135	0/1:32,2:34:65.31:65,0,503	0/1:25,1:25:27.83:28,0,183	0/0:32,0:31:16.96:0,17,236	0/1:32,2:35:50.86:51,0,163	0/1:9,0:7:25.39:25,0,40
chr10	106532016	.	TGG	T	741.47	PASS	AB=0.773;AC=12;AF=0.231;AN=52;BaseQRankSum=-1.372;DP=260;FS=17.520;HRun=12;HaplotypeScore=42.8923;InbreedingCoeff=0.4460;MQ=86.10;MQ0=1;MQRankSum=0.439;QD=9.27;ReadPosRankSum=2.366;VQSLOD=0.3279;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:15:17.49:0,17,153	0/1:3,1:4:3.91:25,0,4	0/0:29,0:19:20.27:0,20,217	0/0:22,0:20:14.60:0,15,111	0/1:5,1:6:21.50:21,0,59	./.	0/1:13,1:17:0.63:1,0,197	1/1:8,1:10:11.72:94,12,0	0/0:6,0:6:3.27:0,3,8	0/0:4,0:5:5.51:0,6,53	0/0:5,0:5:6.02:0,6,90	0/0:8,0:10:3:0,3,26	0/0:2,0:3:2.99:0,3,24	0/0:10,0:10:5.34:0,5,54	0/0:6,0:6:8.46:0,8,98	0/0:10,0:10:9.01:0,9,113	0/0:16,0:17:32.02:0,32,323	0/0:6,0:7:14.54:0,15,187	1/1:6,0:9:16.91:103,17,0	0/1:2,2:5:4.22:52,0,4	1/1:6,9:15:24.03:243,24,0	0/0:4,0:4:3.01:0,3,45	./.	0/0:6,0:6:15.03:0,15,184	0/0:8,0:8:8.38:0,8,78	0/0:6,0:7:8.52:0,9,98	1/1:8,6:14:36.03:357,36,0	0/0:1,0:1:2.97:0,3,20
chr10	106532027	.	GGT	G	278.65	PASS	AB=0.898;AC=7;AF=0.135;AN=52;BaseQRankSum=3.999;DP=256;FS=15.757;HRun=0;HaplotypeScore=44.7280;InbreedingCoeff=0.0774;MQ=90.27;MQ0=1;MQRankSum=-1.388;QD=4.98;ReadPosRankSum=5.052;VQSLOD=0.6376;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:35.91:0,36,363	0/1:4,0:4:6.41:6,0,17	0/0:23,1:16:7.49:0,7,223	0/0:24,0:20:41.95:0,42,376	0/0:5,0:5:3.84:0,4,81	./.	0/0:23,0:23:38.03:0,38,374	0/1:6,0:6:2.20:2,0,46	0/0:6,0:6:4.13:0,4,27	0/0:4,0:4:8.92:0,9,90	0/0:5,0:5:5.99:0,6,71	0/0:12,0:12:18.63:0,19,141	0/0:5,0:5:9:0,9,89	0/0:9,0:9:5.01:0,5,60	0/0:7,0:7:14.59:0,15,121	0/0:7,0:7:14.99:0,15,186	0/0:15,0:15:35.64:0,36,444	0/0:9,0:8:20.91:0,21,228	0/1:5,3:8:39.74:56,0,40	0/1:5,1:6:6.19:6,0,47	0/1:17,2:19:73.96:74,0,109	0/0:1,0:1:3.01:0,3,33	0/0:3,0:3:3:0,3,25	0/0:8,0:8:20.78:0,21,251	0/0:8,0:8:3.13:0,3,101	0/0:8,0:8:17.87:0,18,183	1/1:7,6:13:34.53:254,35,0	./.
chr10	106532069	.	AG	A	242.12	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=2.488;DP=366;FS=0.000;HRun=1;HaplotypeScore=41.8559;InbreedingCoeff=0.8565;MQ=70.34;MQ0=1;MQRankSum=-1.912;QD=30.26;ReadPosRankSum=0.652;VQSLOD=3.1738;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.29:0,90,1410	0/0:7,0:7:21.07:0,21,336	0/0:35,0:29:87.23:0,87,1342	0/0:26,0:23:63.68:0,64,960	0/0:4,0:4:12.04:0,12,192	0/0:10,0:10:27.09:0,27,429	0/0:21,0:21:63.20:0,63,983	0/0:15,0:15:45.15:0,45,719	1/1:0,8:8:24.08:335,24,0	0/0:7,0:7:21.07:0,21,335	0/0:5,0:5:15.05:0,15,240	0/0:13,0:13:36.11:0,36,551	0/0:9,0:8:21.07:0,21,336	0/0:6,0:6:18.06:0,18,287	0/0:9,0:9:27.09:0,27,432	0/0:9,0:9:27.07:0,27,406	0/0:25,0:25:69.24:0,69,1103	0/0:12,0:12:36.12:0,36,574	0/0:16,0:14:36.11:0,36,552	0/0:11,0:11:30.10:0,30,477	0/0:28,0:27:72.25:0,72,1151	0/0:4,0:4:12.04:0,12,192	0/0:3,0:3:9.03:0,9,144	0/0:12,0:12:36.12:0,36,575	0/0:7,0:7:21.06:0,21,312	0/0:15,0:14:45.15:0,45,718	0/0:18,0:18:48.16:0,48,766	./.
chr10	106534453	.	AAT	A	964.81	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.746;DP=735;FS=0.000;HRun=0;HaplotypeScore=86.7721;InbreedingCoeff=0.8380;MQ=67.97;MQ0=0;MQRankSum=-1.000;QD=35.73;ReadPosRankSum=1.345;VQSLOD=5.4495;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:96.27:0,96,1690	0/0:15,0:15:42.14:0,42,786	0/0:13,0:13:27.27:0,27,337	0/0:10,0:10:2.40:0,2,150	0/0:31,0:31:90.31:0,90,1672	0/0:26,0:26:78.23:0,78,1372	0/0:22,0:22:66.17:0,66,1124	0/0:33,0:33:96.32:0,96,1732	1/1:0,27:27:72.24:1060,72,0	0/0:25,0:25:69.21:0,69,1204	0/0:20,0:20:57.17:0,57,986	0/0:30,0:30:87.30:0,87,1621	0/0:21,0:21:63.22:0,63,1170	0/0:22,0:22:63.20:0,63,1128	0/0:44,0:44:99:0,129,2289	0/0:44,1:45:88.28:0,88,2371	0/0:32,0:32:93.24:0,93,1600	0/0:16,0:16:48.12:0,48,831	0/0:12,0:12:36.11:0,36,644	0/0:31,0:31:84.26:0,84,1480	0/0:23,0:23:66.19:0,66,1161	0/0:35,0:35:93.32:0,93,1722	0/0:26,0:26:75.24:0,75,1347	0/0:31,0:31:93.28:0,93,1670	0/0:18,0:17:42.14:0,42,766	0/0:35,0:35:99:0,105,1874	0/0:36,0:35:99:0,108,1864	0/0:18,0:18:48.11:0,48,816
chr10	106538353	.	G	GGAGA	1094.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.453;DP=722;FS=3.333;HRun=0;HaplotypeScore=119.4321;InbreedingCoeff=0.9952;MQ=87.37;MQ0=0;MQRankSum=-1.587;QD=42.08;ReadPosRankSum=1.494;VQSLOD=4.0226;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,1957	0/0:7,0:7:21.07:0,21,377	0/0:27,0:27:69.02:0,69,1174	0/0:35,0:34:80.35:0,80,1562	0/0:18,0:18:54.17:0,54,941	0/0:23,0:23:63.22:0,63,1118	0/0:24,0:24:66.23:0,66,1186	0/0:27,0:27:72.21:0,72,1230	1/1:7,18:26:48.16:1189,48,0	0/0:25,0:25:72.24:0,72,1269	0/0:15,0:15:42.14:0,42,755	0/0:37,0:37:99:0,102,1790	0/0:26,0:26:75.26:0,75,1333	0/0:23,0:23:66.23:0,66,1186	0/0:33,0:33:90.31:0,90,1612	0/0:49,0:49:99:0,135,2398	0/0:32,0:32:84.27:0,84,1480	0/0:24,0:24:54.18:0,54,969	0/0:24,0:24:66.21:0,66,1143	0/0:11,0:11:30.09:0,30,510	0/0:56,0:56:99:0,157,2733	0/0:30,0:30:81.28:0,81,1439	0/0:15,0:15:39.13:0,39,701	0/0:17,0:17:39.09:0,39,667	0/0:21,0:21:57.18:0,57,969	0/0:27,0:27:78.26:0,78,1375	0/0:16,0:14:42.13:0,42,727	0/0:13,0:13:39.13:0,39,701
chr10	106539331	.	GTAA	G	517.65	PASS	AC=8;AF=0.222;AN=36;BaseQRankSum=5.159;DP=194;FS=28.764;HRun=0;HaplotypeScore=27.5861;InbreedingCoeff=0.6542;MQ=70.09;MQ0=0;MQRankSum=1.047;QD=8.92;ReadPosRankSum=1.417;VQSLOD=1.3367;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:9.01:0,9,139	./.	./.	./.	0/0:3,0:3:9.03:0,9,138	0/0:8,0:8:18.06:0,18,316	./.	1/1:24,0:24:6.02:71,6,0	0/0:3,0:4:5.98:0,6,59	0/0:10,0:10:12.04:0,12,190	0/0:3,0:3:6.02:0,6,106	0/0:3,0:3:6.02:0,6,115	0/0:5,0:5:15.05:0,15,288	./.	0/0:5,0:5:15.05:0,15,279	0/0:5,0:5:6.02:0,6,115	1/1:5,12:16:30.10:392,30,0	0/0:25,2:27:5.52:0,6,746	1/1:8,1:9:3.01:40,3,0	./.	./.	./.	./.	0/0:3,0:3:3.01:0,3,58	0/0:11,0:11:12.04:0,12,231	./.	1/1:4,3:8:12.01:140,12,0	0/0:16,0:16:33.11:0,33,613
chr10	106539549	.	GAAAACAAAAC	G	695.24	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.706;DP=588;FS=0.000;HRun=0;HaplotypeScore=169.0606;InbreedingCoeff=0.9303;MQ=77.90;MQ0=4;MQRankSum=-4.940;QD=53.48;ReadPosRankSum=0.128;VQSLOD=3.4188;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,120,5892	0/0:5,0:5:15.05:0,15,758	0/0:35,0:27:30.08:0,30,1095	0/0:46,0:27:54.66:0,55,1858	0/0:16,0:16:33.08:0,33,1465	0/0:21,0:21:54.19:0,54,2672	0/0:28,0:28:57.20:0,57,2869	0/0:20,0:20:39.13:0,39,1697	1/1:4,9:13:27.09:789,27,0	0/0:14,0:14:27.09:0,27,1286	0/0:9,0:9:12.04:0,12,606	0/0:27,0:27:72.25:0,72,3605	0/0:20,0:20:51.14:0,51,2234	0/0:15,0:16:39.13:0,39,1817	0/0:16,0:16:36.12:0,36,1719	0/0:19,0:19:51.17:0,51,2482	0/0:26,0:26:66.22:0,66,3157	0/0:25,0:25:69.24:0,69,3216	0/0:27,0:27:54.19:0,54,2522	0/0:13,0:13:27.09:0,27,1358	0/0:35,0:36:72.24:0,72,3299	0/0:7,0:7:21.06:0,21,884	0/0:5,0:6:15.05:0,15,531	0/0:29,0:29:63.12:0,63,2963	0/0:16,0:17:39.13:0,39,1752	0/0:21,0:21:57.20:0,57,2773	0/0:10,0:10:21.07:0,21,1019	0/0:12,0:12:33.11:0,33,1666
chr10	106540126	.	CGGAGCCCAGGAGCCCT	C	3430.27	PASS	AB=0.596;AC=9;AF=0.161;AN=56;BaseQRankSum=10.544;DP=536;FS=2.789;HRun=0;HaplotypeScore=220.2687;InbreedingCoeff=0.9351;MQ=65.96;MQ0=0;MQRankSum=-2.158;QD=35.36;ReadPosRankSum=-0.804;VQSLOD=2.9722;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,6475	0/0:5,0:5:15.02:0,15,749	0/0:6,0:6:11.78:0,12,566	0/0:10,0:10:24.02:0,24,828	0/0:16,0:16:45.13:0,45,3045	0/0:25,0:25:66.23:0,66,4481	0/0:35,0:35:99:0,99,6098	1/1:7,16:23:41.16:332,41,0	0/0:17,0:17:51.16:0,51,3025	0/0:20,0:20:51.17:0,51,2944	0/0:6,0:6:15.05:0,15,984	0/0:25,0:25:72.25:0,72,4867	0/0:18,0:18:54.19:0,54,3584	0/0:26,0:26:72.25:0,72,5055	0/0:14,0:14:36.12:0,36,2773	0/0:18,0:18:51.18:0,51,3437	0/0:38,0:38:99:0,111,7166	0/0:30,0:30:81.28:0,81,6121	1/1:3,10:13:29.71:671,30,0	1/1:2,9:11:17.60:480,18,0	0/1:9,19:28:0.11:1,0,0	0/0:10,0:10:30.10:0,30,1916	0/0:10,0:10:30.10:0,30,1900	0/0:30,0:30:84.26:0,84,5456	0/0:16,0:16:48.16:0,48,2959	0/0:13,0:13:39.13:0,39,2453	1/1:2,20:22:41.15:1947,41,0	0/0:14,0:14:42.13:0,42,2736
chr10	106540929	.	CCTTT	C	1312.74	PASS	AB=1.000;AC=17;AF=0.315;AN=54;BaseQRankSum=7.559;DP=579;FS=2.201;HRun=0;HaplotypeScore=97.7360;InbreedingCoeff=0.9143;MQ=55.67;MQ0=13;MQRankSum=0.235;QD=8.58;ReadPosRankSum=0.366;VQSLOD=2.5447;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:30.10:0,30,684	1/1:1,4:5:8.98:112,9,0	./.	0/1:3,0:2:0:0,0,0	0/0:16,0:26:23.95:0,24,286	0/0:30,0:30:24.08:0,24,492	0/0:10,0:10:15.05:0,15,350	1/1:28,0:26:5.92:39,6,0	1/1:13,0:13:12.01:112,12,0	0/0:27,0:27:47.95:0,48,988	0/0:29,0:29:30.10:0,30,667	0/0:18,0:18:42.13:0,42,857	0/0:27,0:27:48.13:0,48,989	0/0:13,0:13:15.03:0,15,240	0/0:26,0:26:33.11:0,33,687	0/0:17,0:17:18.06:0,18,391	0/0:39,0:39:66.15:0,66,1349	0/0:26,0:24:29.44:0,29,678	1/1:22,5:22:15.04:212,15,0	1/1:6,12:18:27.09:408,27,0	1/1:6,5:10:12.04:186,12,0	1/1:7,9:15:15:204,15,0	0/0:19,0:18:24.08:0,24,560	0/0:18,0:18:39.09:0,39,799	0/0:33,0:33:60.11:0,60,1203	0/0:30,0:30:48.20:0,48,1042	1/1:19,12:31:15.05:232,15,0	0/0:11,0:11:15.05:0,15,339
chr10	106541732	.	AAAAAG	A	142.76	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.431;DP=525;FS=1.776;HRun=0;HaplotypeScore=92.4891;InbreedingCoeff=0.8105;MQ=57.58;MQ0=12;MQRankSum=-0.767;QD=12.98;ReadPosRankSum=0.987;VQSLOD=2.4623;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,111,2816	0/0:6,0:5:15.05:0,15,435	0/0:12,0:9:3.56:0,4,503	0/0:18,0:12:32.28:0,32,670	0/0:17,0:17:33.11:0,33,880	0/0:16,0:15:45.15:0,45,1261	0/0:26,0:25:54.19:0,54,1559	0/0:32,0:30:72.25:0,72,1955	1/1:4,7:11:12.04:229,12,0	0/0:16,0:14:39.13:0,39,1055	0/0:17,0:16:39.13:0,39,1071	0/0:25,0:24:60.21:0,60,1656	0/0:9,0:8:24.08:0,24,676	0/0:17,0:17:48.16:0,48,1360	0/0:33,0:33:87.30:0,87,2450	0/0:21,0:19:54.13:0,54,1496	0/0:34,0:34:84.29:0,84,2345	0/0:23,0:22:57.17:0,57,1565	0/0:12,0:11:30.10:0,30,815	0/0:13,0:12:36.12:0,36,1022	0/0:20,0:20:48.16:0,48,1380	0/0:17,0:16:42.14:0,42,1143	0/0:15,0:15:42.14:0,42,1101	0/0:19,0:19:55.43:0,55,1530	0/0:11,0:11:30.10:0,30,841	0/0:20,0:18:54.19:0,54,1517	0/0:17,0:17:48.16:0,48,1307	0/0:6,0:6:18.06:0,18,522
chr10	106542086	.	CT	C	173.86	PASS	AB=0.938;AC=4;AF=0.071;AN=56;BaseQRankSum=4.748;DP=569;FS=0.000;HRun=12;HaplotypeScore=66.4800;InbreedingCoeff=0.4410;MQ=81.74;MQ0=0;MQRankSum=-0.579;QD=3.70;ReadPosRankSum=-0.375;VQSLOD=0.0241;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,1:22:15.82:0,16,329	0/0:8,0:8:15.03:0,15,152	0/1:19,0:17:6.30:6,0,137	0/0:20,0:20:6.37:0,6,99	0/0:18,0:18:45.09:0,45,457	0/0:27,1:28:48.94:0,49,671	0/0:27,0:27:63.08:0,63,619	0/0:24,1:25:22.33:0,22,399	1/1:2,12:14:32.85:255,33,0	0/0:28,0:28:48.08:0,48,479	0/0:18,1:20:21.67:0,22,377	0/0:20,0:20:45.05:0,45,437	0/0:17,0:19:35.91:0,36,349	0/0:16,0:17:30.77:0,31,283	0/0:23,0:23:60.09:0,60,599	0/0:31,0:32:71.93:0,72,703	0/0:17,0:17:45.09:0,45,457	0/0:12,0:14:41.71:0,42,383	0/0:15,0:16:17.17:0,17,322	0/0:29,0:29:75.12:0,75,745	0/1:12,2:14:22.43:22,0,159	0/0:16,1:18:41.90:0,42,398	0/0:22,0:22:39.08:0,39,396	0/0:17,0:17:36.06:0,36,359	0/0:12,1:13:11.87:0,12,287	0/0:26,1:28:36.83:0,37,538	0/0:28,1:29:39.73:0,40,548	0/0:12,0:12:27.04:0,27,268
chr10	106543921	.	AAC	A	193.18	PASS	AB=0.892;AC=12;AF=0.214;AN=56;BaseQRankSum=5.843;DP=663;FS=2.254;HRun=0;HaplotypeScore=95.0932;InbreedingCoeff=-0.2914;MQ=71.21;MQ0=5;MQRankSum=1.341;QD=0.79;ReadPosRankSum=-0.151;VQSLOD=1.6365;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:41,6:46:60.61:61,0,1392	0/0:7,0:7:6:0,6,71	0/0:45,1:25:30:0,30,351	0/0:33,0:23:17.99:0,18,181	0/0:14,0:14:24.08:0,24,370	0/1:14,2:16:1.91:2,0,415	0/0:35,1:36:5.25:0,5,958	0/0:31,0:30:17.79:0,18,205	0/1:19,0:19:14.31:14,0,37	0/1:11,1:12:16.94:17,0,211	0/1:6,1:7:19.94:20,0,167	0/0:30,2:32:8.21:0,8,976	0/1:25,2:27:24.84:25,0,542	0/1:34,3:37:17.74:18,0,1077	0/0:29,0:29:72.24:0,72,1113	0/0:36,2:38:12.16:0,12,1202	0/0:21,1:22:13.16:0,13,660	0/1:14,2:16:4.98:5,0,340	0/1:23,0:23:19.54:20,0,80	0/0:6,0:6:2.42:0,2,44	0/0:41,0:41:8.70:0,9,62	0/0:8,0:8:20.86:0,21,295	0/1:6,1:7:22.96:23,0,129	0/0:34,2:36:8.26:0,8,1028	0/0:18,1:19:13.13:0,13,615	0/1:20,5:26:67.98:68,0,514	0/0:21,0:20:27.21:0,27,222	0/1:4,2:7:63.06:63,0,146
chr10	106543923	.	C	CACACACACACAA	7902.36	PASS	AB=0.538;AC=13;AF=0.232;AN=56;BaseQRankSum=0.851;DP=702;FS=8.083;HRun=0;HaplotypeScore=237.8271;InbreedingCoeff=0.8828;MQ=67.02;MQ0=5;MQRankSum=-8.752;QD=43.66;ReadPosRankSum=-5.614;VQSLOD=2.2952;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:99:0,126,3737	0/1:1,6:7:36.56:189,0,37	0/0:45,0:22:46.98:0,47,691	0/0:33,0:22:32.65:0,33,470	0/0:12,0:12:33.06:0,33,871	0/0:16,0:16:33.10:0,33,1046	0/0:37,0:37:90.18:0,90,2390	1/1:36,0:35:75.09:1670,75,0	1/1:29,0:29:65.24:1590,65,0	0/0:14,0:14:24.05:0,24,595	0/0:8,0:8:15.05:0,15,453	0/0:33,0:33:87.17:0,87,2400	0/0:27,0:27:63.05:0,63,1478	0/0:40,0:40:98.24:0,98,2762	0/0:30,0:30:87.11:0,87,2368	0/0:36,0:36:92.34:0,92,3106	0/0:22,0:22:60.13:0,60,1599	0/0:18,0:18:39:0,39,955	1/1:19,1:20:27.45:816,27,0	1/1:7,1:8:20.95:535,21,0	1/1:25,21:53:34.22:1153,34,0	0/0:8,0:8:20.86:0,21,562	0/0:7,0:7:15.03:0,15,342	0/0:36,0:36:92.71:0,93,2572	0/0:18,0:18:48.12:0,48,1419	0/0:26,0:26:72.09:0,72,1669	1/1:10,16:27:43.03:1949,43,0	0/0:7,0:7:9.76:0,10,498
chr10	106543925	.	C	CACACACACAA	5952.86	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=4.859;DP=703;FS=7.198;HRun=0;HaplotypeScore=219.7278;InbreedingCoeff=0.7397;MQ=66.21;MQ0=6;MQRankSum=-8.982;QD=32.89;ReadPosRankSum=-3.344;VQSLOD=3.1687;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:99:0,129,3331	0/1:6,0:6:44.90:126,0,45	0/0:47,0:23:24.94:0,25,661	0/0:33,0:21:34.70:0,35,499	0/0:12,0:12:33.06:0,33,779	0/0:14,0:14:33.10:0,33,927	0/0:36,0:36:93.14:0,93,2174	1/1:38,0:37:26.44:1199,26,0	1/1:29,0:29:37.64:1283,38,0	0/0:14,0:14:33.06:0,33,616	0/0:8,0:8:18.04:0,18,425	0/0:32,0:32:87.19:0,87,2165	0/0:28,0:28:66.02:0,66,1395	0/0:39,0:39:99:0,107,2571	0/0:30,0:30:87.12:0,87,2177	0/0:36,0:36:99:0,106,2751	0/0:22,0:22:60.12:0,60,1448	0/0:18,0:18:45:0,45,900	1/1:11,9:20:16.94:783,17,0	1/1:9,0:9:3.31:373,3,0	0/1:52,0:52:10.43:733,0,10	0/0:8,0:8:21.06:0,21,528	0/0:7,0:7:15.03:0,15,362	0/0:37,0:37:96.16:0,96,2323	0/0:17,0:17:48.12:0,48,1262	0/0:26,0:26:72.07:0,72,1479	1/1:27,0:26:10.70:1456,11,0	0/0:8,0:8:16.45:0,16,449
chr10	106545936	.	TAGG	T	232.49	PASS	AB=0.656;AC=1;AF=0.018;AN=56;BaseQRankSum=4.116;DP=639;FS=2.826;HRun=0;HaplotypeScore=88.2990;InbreedingCoeff=-0.0188;MQ=72.19;MQ0=0;MQRankSum=-1.639;QD=11.07;ReadPosRankSum=1.448;VQSLOD=3.0589;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,156,3455	0/0:14,0:14:36.10:0,36,743	0/0:12,0:12:36.12:0,36,728	0/0:14,0:14:26.32:0,26,708	0/0:14,0:14:39.13:0,39,880	0/0:14,0:14:42.14:0,42,967	0/0:31,0:31:93.04:0,93,1847	0/0:23,0:23:60.21:0,60,1383	0/0:21,0:21:60.21:0,60,1383	0/0:28,0:28:84.29:0,84,1906	0/0:9,0:9:27.08:0,27,579	0/0:42,0:42:99:0,117,2698	0/0:23,0:23:69.24:0,69,1591	0/0:30,0:30:90.29:0,90,2002	0/0:23,0:23:63.20:0,63,1408	0/1:10,11:21:99:307,0,640	0/0:30,0:30:90.31:0,90,2076	0/0:23,0:23:69.22:0,69,1542	0/0:19,0:19:54.19:0,54,1222	0/0:14,0:14:39.12:0,39,808	0/0:31,0:31:93.32:0,93,2144	0/0:23,0:23:66.17:0,66,1344	0/0:14,0:14:42.14:0,42,968	0/0:36,0:36:99:0,108,2491	0/0:21,0:21:57.16:0,57,1206	0/0:32,0:32:87.28:0,87,1901	0/0:19,0:19:57.16:0,57,1224	0/0:6,0:6:15.05:0,15,346
chr10	106546394	.	TG	T	645.19	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.975;DP=632;FS=1.779;HRun=2;HaplotypeScore=58.4514;InbreedingCoeff=0.9002;MQ=69.25;MQ0=0;MQRankSum=0.313;QD=30.72;ReadPosRankSum=1.362;VQSLOD=3.2516;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1573	0/0:10,0:10:30.10:0,30,447	0/0:6,0:6:18.06:0,18,261	0/0:8,0:9:6.78:0,7,168	0/0:14,0:14:33.11:0,33,494	0/0:12,0:12:30.05:0,30,387	0/0:20,0:20:57.19:0,57,854	0/0:26,0:26:75.25:0,75,1119	1/1:0,21:21:57.19:740,57,0	0/0:21,0:21:63.21:0,63,933	0/0:9,0:9:24.07:0,24,338	0/0:45,0:45:99:0,129,1904	0/0:27,0:27:81.25:0,81,1174	0/0:19,0:19:57.18:0,57,835	0/0:35,0:35:99:0,105,1510	0/0:25,1:26:39.28:0,39,1045	0/0:32,0:32:96.33:0,96,1438	0/0:22,0:22:63.21:0,63,941	0/0:27,0:27:78.24:0,78,1118	0/0:14,0:14:39.13:0,39,577	0/0:58,0:58:99:0,175,2529	0/0:7,0:7:18.06:0,18,269	0/0:13,0:13:30.10:0,30,444	0/0:37,0:37:99:0,105,1549	0/0:17,0:17:48.16:0,48,720	0/0:25,0:25:72.24:0,72,1079	0/0:27,0:27:81.23:0,81,1138	0/0:16,0:16:48.16:0,48,710
chr10	106548172	.	TAC	T	243.23	PASS	AB=0.919;AC=8;AF=0.143;AN=56;BaseQRankSum=8.697;DP=691;FS=11.252;HRun=0;HaplotypeScore=92.5258;InbreedingCoeff=0.0528;MQ=58.27;MQ0=12;MQRankSum=-3.219;QD=1.42;ReadPosRankSum=2.619;VQSLOD=0.4304;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:45.13:0,45,671	0/0:10,0:10:12.04:0,12,183	0/0:47,0:23:24.04:0,24,301	0/0:42,0:28:18.06:0,18,263	0/0:5,0:5:3.01:0,3,47	0/0:20,1:21:4.60:0,5,515	0/1:26,3:30:38.82:39,0,784	0/0:23,1:25:4.11:0,4,503	1/1:6,0:27:56.82:280,57,0	0/0:18,0:18:24.07:0,24,357	0/0:13,0:13:18.06:0,18,270	0/0:31,0:31:66.21:0,66,1010	0/0:20,1:22:1.97:0,2,580	0/0:31,2:33:5.24:0,5,961	0/0:29,2:31:10.23:0,10,623	0/1:28,4:33:20.75:21,0,1046	0/0:28,1:29:22.19:0,22,806	0/1:13,1:14:7.95:8,0,317	0/1:23,1:23:1.96:2,0,380	0/1:14,2:16:4.76:5,0,384	0/0:67,6:73:77.67:0,78,1866	0/0:18,2:20:1.10:0,1,459	0/0:12,0:12:21.07:0,21,325	0/1:25,2:27:16.52:17,0,673	0/0:19,1:19:13.14:0,13,645	0/0:12,0:12:24.07:0,24,346	0/0:22,0:22:45.13:0,45,681	0/0:5,0:5:12.04:0,12,183
chr10	106548234	.	T	TAC	738.34	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.122;DP=704;FS=1.846;HRun=0;HaplotypeScore=105.5194;InbreedingCoeff=0.9547;MQ=62.36;MQ0=9;MQRankSum=-3.073;QD=26.37;ReadPosRankSum=-0.849;VQSLOD=4.4219;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:46:99:0,108,1171	0/0:5,0:5:12.04:0,12,146	0/0:30,0:14:23.04:0,23,223	0/0:28,0:23:36.09:0,36,375	0/0:11,0:10:24.04:0,24,261	0/0:20,0:21:41.95:0,42,479	0/0:28,0:28:60.10:0,60,714	0/0:23,0:23:51.16:0,51,623	1/1:12,16:28:56.94:833,57,0	0/0:24,0:24:57:0,57,661	0/0:16,0:16:26.65:0,27,317	0/0:23,0:24:56.99:0,57,653	0/0:26,0:28:74.88:0,75,858	0/0:27,0:27:63.06:0,63,716	0/0:31,0:31:78.23:0,78,938	0/0:37,0:38:96.04:0,96,1089	0/0:27,0:28:71.98:0,72,814	0/0:16,0:17:26.65:0,27,446	0/0:18,0:16:44.68:0,45,487	0/0:13,0:13:27.06:0,27,307	0/0:100,0:101:99:0,225,2651	0/0:15,0:15:35.93:0,36,406	0/0:14,0:14:35.62:0,36,417	0/0:21,0:22:53.96:0,54,600	0/0:16,0:16:36.10:0,36,427	0/0:15,0:15:33.07:0,33,363	0/0:27,0:27:69.22:0,69,843	0/0:7,0:7:18.05:0,18,209
chr10	106553760	.	G	GA	57.59	PASS	AB=0.619;AC=1;AF=0.018;AN=56;BaseQRankSum=4.624;DP=564;FS=6.210;HRun=0;HaplotypeScore=74.6610;InbreedingCoeff=0.0953;MQ=73.74;MQ0=9;MQRankSum=-1.964;QD=4.43;ReadPosRankSum=0.784;VQSLOD=2.4685;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.24:0,81,1067	0/0:11,0:11:25.75:0,26,264	0/0:56,0:22:12.01:0,12,515	0/0:49,0:22:28.87:0,29,216	0/0:18,0:18:51.13:0,51,656	0/0:12,0:12:36.03:0,36,475	0/0:28,0:28:84.22:0,84,1112	0/0:18,0:18:45.15:0,45,612	0/1:5,6:13:11.57:132,0,12	0/0:24,0:24:66.05:0,66,882	0/0:9,0:9:24.08:0,24,326	0/0:20,0:20:57.13:0,57,718	0/0:15,0:15:32.45:0,32,452	0/0:10,0:10:30.10:0,30,397	0/0:21,0:21:63.18:0,63,843	0/0:11,0:11:30.09:0,30,401	0/0:27,0:25:78.25:0,78,1066	0/0:27,0:27:75.22:0,75,1003	0/0:19,0:18:51.16:0,51,694	0/0:17,0:17:48.05:0,48,588	0/0:14,0:14:36.11:0,36,485	0/0:16,0:16:48.14:0,48,624	0/0:14,0:14:41.79:0,42,517	0/0:15,0:15:42.14:0,42,582	0/0:22,0:22:63.21:0,63,868	0/0:31,0:31:71.85:0,72,914	0/0:10,0:10:30.10:0,30,418	0/0:8,0:8:21.07:0,21,284
chr10	106555406	.	AACACAC	A	1589.25	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.539;DP=652;FS=18.325;HRun=0;HaplotypeScore=136.5837;InbreedingCoeff=0.8999;MQ=56.65;MQ0=18;MQRankSum=-6.177;QD=12.13;ReadPosRankSum=-1.079;VQSLOD=1.7927;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:39:99:0,99,2915	1/1:3,5:8:8.90:190,9,0	0/0:40,0:14:8.69:0,9,193	0/0:56,0:11:9.03:0,9,166	0/0:9,0:9:21.07:0,21,653	0/0:14,0:14:33.11:0,33,1068	0/0:31,0:34:72.25:0,72,2203	1/1:9,6:14:20.97:308,21,0	1/1:7,16:23:27.98:566,28,0	0/0:15,0:15:25.30:0,25,760	0/0:5,0:5:15.05:0,15,447	0/0:30,0:33:75.23:0,75,2072	0/0:26,0:26:57.20:0,57,1677	0/0:29,0:29:69.22:0,69,1970	0/0:23,0:25:51.17:0,51,1389	0/0:27,0:29:69.21:0,69,2034	0/0:31,0:38:84.29:0,84,2475	0/0:21,0:26:54.18:0,54,1553	1/1:13,3:10:6.02:127,6,0	1/1:1,6:7:11.63:167,12,0	1/1:33,21:54:6.02:119,6,0	0/0:7,0:6:9.03:0,9,271	0/0:8,0:8:14.95:0,15,421	0/0:44,0:45:93.32:0,93,2849	0/0:14,0:14:36:0,36,1094	0/0:17,0:17:36.12:0,36,1113	1/1:0,7:8:14.92:295,15,0	0/0:8,0:8:21.07:0,21,626
chr10	106555519	.	ACG	A	784.39	PASS	AB=0.833;AC=9;AF=0.161;AN=56;BaseQRankSum=9.561;DP=678;FS=4.158;HRun=0;HaplotypeScore=112.8978;InbreedingCoeff=0.5617;MQ=52.90;MQ0=8;MQRankSum=-9.271;QD=7.92;ReadPosRankSum=-3.516;VQSLOD=2.7484;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,112,2095	1/1:3,2:5:8.98:106,9,0	0/0:36,0:16:27.04:0,27,613	0/0:45,0:19:54.16:0,54,917	0/0:4,0:4:6.02:0,6,116	0/0:18,0:18:42.14:0,42,792	0/0:46,0:46:99:0,126,2345	0/1:22,3:24:0.20:344,0,0	0/0:16,0:16:21.07:0,21,405	0/0:27,0:27:81.27:0,81,1523	0/0:6,0:6:18.06:0,18,346	0/0:35,0:34:99:0,102,1914	0/0:15,0:15:45.05:0,45,789	0/0:26,0:26:66.21:0,66,1238	0/0:23,0:23:69.22:0,69,1298	0/0:23,0:22:63.19:0,63,1133	0/0:42,0:42:99:0,108,2151	0/0:40,0:40:99:0,114,2171	0/1:13,3:12:43.30:145,0,43	1/1:7,4:11:7.52:96,8,0	1/1:26,3:27:2.94:18,3,0	0/0:15,0:15:39.12:0,39,689	0/0:14,0:14:39.13:0,39,746	0/0:60,0:60:99:0,156,2957	0/0:8,0:8:21.07:0,21,405	0/0:27,0:27:72.24:0,72,1339	0/1:9,4:13:34.90:214,0,35	0/0:10,0:10:27.09:0,27,479
chr10	106555525	.	GCA	G	375.10	PASS	AB=0.787;AC=3;AF=0.054;AN=56;BaseQRankSum=6.665;DP=659;FS=0.797;HRun=0;HaplotypeScore=114.2073;InbreedingCoeff=0.0331;MQ=52.82;MQ0=7;MQRankSum=-5.557;QD=7.08;ReadPosRankSum=-2.490;VQSLOD=2.7572;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:89.21:0,89,1221	0/0:6,0:6:0.09:0,0,29	0/0:30,0:13:11.57:0,12,297	0/0:38,0:15:29.75:0,30,374	0/0:4,0:4:8.76:0,9,102	0/0:20,0:20:38.93:0,39,584	0/0:42,1:43:99:0,113,1673	0/1:9,15:23:20.95:422,0,21	0/0:14,0:14:18.06:0,18,280	0/0:29,0:29:81.07:0,81,1108	0/0:6,0:6:18.05:0,18,279	0/0:37,0:36:99:0,102,1385	0/0:14,0:14:32.55:0,33,434	0/0:30,0:30:80.58:0,81,1073	0/0:26,0:26:71.48:0,71,959	0/0:20,0:19:53.95:0,54,758	0/0:37,0:37:94.93:0,95,1343	0/0:40,0:40:99:0,110,1621	0/1:16,2:15:40.84:41,0,115	0/1:9,2:11:0.29:0,0,4	0/0:25,7:30:8.91:0,9,67	0/0:14,0:14:30.16:0,30,509	0/0:14,0:14:39.10:0,39,615	0/0:58,0:58:99:0,149,2338	0/0:10,0:10:24.02:0,24,322	0/0:24,0:23:59.86:0,60,947	0/0:10,4:14:16.78:0,17,88	0/0:10,0:10:7.93:0,8,198
chr10	106555535	.	GCA	G	644.58	PASS	AB=0.873;AC=20;AF=0.385;AN=52;BaseQRankSum=6.311;DP=640;FS=10.715;HRun=0;HaplotypeScore=105.4149;InbreedingCoeff=-0.4120;MQ=51.47;MQ0=12;MQRankSum=0.322;QD=1.35;ReadPosRankSum=1.148;VQSLOD=1.2813;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,4:30:89.82:90,0,445	0/0:6,0:6:0:0,0,0	./.	./.	0/1:4,2:6:25.49:25,0,61	0/1:14,2:16:10.43:10,0,262	0/1:41,4:45:99:109,0,771	0/0:35,0:30:14.45:0,14,140	0/1:8,0:17:0:0,0,1	0/1:22,3:25:49.20:49,0,483	0/1:6,0:6:11.79:12,0,45	0/1:27,3:30:11.84:12,0,601	0/1:11,3:14:46.90:47,0,170	0/1:31,5:36:22.88:23,0,634	0/1:19,2:21:64.84:65,0,349	0/1:14,1:14:10.82:11,0,253	0/1:31,5:36:99:109,0,601	0/1:34,6:40:56.68:57,0,857	0/0:18,0:17:7.91:0,8,54	1/1:10,0:10:1.29:5,1,0	0/1:39,1:35:0.01:0,0,1	0/0:16,0:16:24.96:0,25,344	0/0:15,0:15:21.07:0,21,317	0/1:48,8:57:52.76:53,0,1117	0/0:8,2:10:8.28:0,8,99	0/1:21,3:23:23.68:24,0,481	0/0:14,0:14:11.62:0,12,101	0/1:6,2:7:82.85:83,0,121
chr10	106555549	.	A	AAG	228.64	PASS	AB=0.982;AC=7;AF=0.125;AN=56;BaseQRankSum=6.113;DP=621;FS=3.487;HRun=0;HaplotypeScore=108.3542;InbreedingCoeff=0.0904;MQ=49.71;MQ0=19;MQRankSum=-6.403;QD=2.43;ReadPosRankSum=-3.113;VQSLOD=1.6654;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:84.82:0,85,1183	0/1:6,0:6:45.79:46,0,62	0/1:17,0:4:2.81:3,0,77	0/0:22,0:3:9.03:0,9,132	0/0:5,0:5:11.98:0,12,141	0/0:14,0:14:33.08:0,33,499	0/0:49,0:50:99:0,135,1968	0/1:26,1:21:99:172,0,416	0/0:13,0:13:2.87:0,3,33	0/0:24,0:24:68.40:0,68,999	0/0:5,0:5:12.04:0,12,180	0/0:30,0:29:67.07:0,67,982	0/0:15,0:15:35.90:0,36,484	0/0:38,0:36:90.19:0,90,1314	0/0:22,0:22:54.11:0,54,783	0/0:11,0:10:30.06:0,30,434	0/0:40,0:40:99:0,102,1387	0/0:36,0:36:99:0,102,1522	0/1:17,1:16:87:87,0,259	1/1:9,2:10:5.55:16,6,0	0/0:48,1:41:2.97:0,3,22	0/0:16,0:16:42.14:0,42,672	0/0:13,0:13:26.96:0,27,426	0/0:49,0:49:99:0,126,1854	0/0:13,0:13:17.60:0,18,280	0/0:22,0:21:63.18:0,63,955	0/1:15,0:15:26.53:27,0,106	0/0:8,0:7:18.02:0,18,220
chr10	106555563	.	ACGCACGCACG	A	711.43	PASS	AB=0.940;AC=10;AF=0.179;AN=56;BaseQRankSum=7.119;DP=582;FS=0.724;HRun=0;HaplotypeScore=162.2542;InbreedingCoeff=0.3546;MQ=52.12;MQ0=22;MQRankSum=-4.999;QD=5.51;ReadPosRankSum=-4.294;VQSLOD=0.7068;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:72.27:0,72,2360	1/1:3,1:5:6.02:118,6,0	0/0:17,0:4:12.04:0,12,269	0/1:19,0:9:19.30:19,0,203	0/0:6,0:6:15.04:0,15,600	0/0:13,0:13:30.05:0,30,925	0/0:42,0:42:99:0,110,4083	0/1:17,0:12:22.14:195,0,22	0/0:13,0:13:3.01:0,3,60	0/0:27,0:27:66.52:0,67,2143	0/0:7,0:7:18.06:0,18,574	0/0:32,0:31:62.13:0,62,2405	0/0:16,0:16:38.16:0,38,1288	0/0:35,0:33:68.07:0,68,2853	0/0:21,0:21:44.26:0,44,1882	0/0:14,0:13:39.10:0,39,1094	0/0:34,0:34:79.23:0,79,3023	0/0:34,0:34:82.37:0,82,3342	0/1:12,0:12:15.94:110,0,16	1/1:12,1:12:7.65:153,8,0	1/1:44,2:38:0.94:2,1,0	0/0:13,0:13:33.06:0,33,1129	0/0:10,0:10:21.05:0,21,860	0/0:50,0:50:99:0,113,4103	0/0:11,0:11:15.45:0,15,427	0/0:23,0:22:50.21:0,50,1652	0/1:13,1:14:10.50:250,0,10	0/0:6,0:6:18.06:0,18,771
chr10	106558145	.	AAAAAG	A	2004.97	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.718;DP=561;FS=7.588;HRun=0;HaplotypeScore=98.9067;InbreedingCoeff=0.9233;MQ=57.28;MQ0=10;MQRankSum=0.725;QD=20.25;ReadPosRankSum=-1.690;VQSLOD=2.5209;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:60.08:0,60,1277	1/1:3,5:8:15.05:272,15,0	0/0:21,0:8:2:0,2,98	0/0:30,0:6:5.59:0,6,26	0/0:19,0:19:27.07:0,27,634	0/0:20,0:20:48.13:0,48,1162	0/0:17,0:17:27.07:0,27,624	1/1:5,16:21:47.95:490,48,0	0/0:12,0:12:21.04:0,21,457	0/0:33,0:33:63.20:0,63,1578	0/0:22,0:22:45.03:0,45,955	0/0:15,0:15:24.53:0,25,558	0/0:10,0:10:21.04:0,21,457	0/0:20,0:20:45.06:0,45,886	0/0:10,0:10:18.05:0,18,417	0/0:23,0:22:42.12:0,42,1037	0/0:34,0:34:66.11:0,66,1511	0/0:31,0:30:61.01:0,61,1394	1/1:6,8:13:24.02:345,24,0	1/1:9,9:17:26.90:383,27,0	1/1:8,4:12:14.99:209,15,0	0/0:13,0:13:21.07:0,21,514	0/0:19,0:19:36.12:0,36,988	0/0:25,0:25:48.15:0,48,1210	0/0:21,0:20:41.69:0,42,911	0/0:32,0:31:66.18:0,66,1602	1/1:9,17:25:26.77:490,27,0	0/0:5,0:5:15.04:0,15,344
chr10	106558929	.	GGAGAGA	G	35.67	PASS	AB=0.922;AC=4;AF=0.077;AN=52;BaseQRankSum=1.991;DP=650;FS=7.826;HRun=0;HaplotypeScore=132.3591;InbreedingCoeff=0.3170;MQ=59.11;MQ0=28;MQRankSum=-0.915;QD=0.48;ReadPosRankSum=-0.344;VQSLOD=2.0908;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:24.53:0,25,454	0/0:12,0:12:3.01:0,3,80	./.	0/0:55,0:15:0:0,0,0	0/0:13,0:13:0.89:0,1,2	0/0:22,0:21:21.52:0,22,391	0/0:22,0:21:23.86:0,24,516	0/0:34,0:30:16.53:0,17,167	1/1:19,6:24:5.30:88,5,0	0/1:19,1:20:38.24:38,0,225	./.	0/0:21,0:23:30.08:0,30,604	0/0:26,0:26:27.09:0,27,630	0/0:19,0:19:9.03:0,9,194	0/0:22,0:22:24.06:0,24,527	0/1:26,0:25:1.09:1,0,276	0/0:33,0:33:49.38:0,49,1202	0/0:18,0:18:12.04:0,12,341	0/0:19,0:15:15.48:0,15,242	0/0:28,0:28:0.94:0,1,2	0/0:24,0:23:18.41:0,18,282	0/0:14,0:14:3.01:0,3,96	0/0:18,0:16:4.26:0,4,44	0/0:20,0:20:24.08:0,24,667	0/0:18,0:18:3.01:0,3,76	0/0:30,0:29:21.14:0,21,353	0/0:26,0:26:22.36:0,22,374	0/0:3,0:3:6.02:0,6,136
chr10	106560635	.	AACAC	A	5496.29	PASS	AB=0.911;AC=16;AF=0.286;AN=56;BaseQRankSum=10.303;DP=910;FS=2.222;HRun=0;HaplotypeScore=164.3022;InbreedingCoeff=0.8387;MQ=59.78;MQ0=14;MQRankSum=-0.229;QD=19.91;ReadPosRankSum=0.088;VQSLOD=4.6741;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:29:3.98:4,0,786	1/1:6,14:22:35.72:562,36,0	0/0:61,0:26:12.51:0,13,224	0/0:54,0:14:3:0,3,25	0/0:25,0:27:53.90:0,54,1172	0/0:14,0:15:41.88:0,42,923	0/0:21,0:22:38.85:0,39,816	1/1:16,12:27:36.09:524,36,0	1/1:12,23:35:69.20:1090,69,0	0/0:29,0:32:65.54:0,66,1388	0/0:22,0:23:50.91:0,51,1172	0/1:18,1:23:2.73:3,0,793	0/0:28,0:28:60.21:0,60,1408	0/0:19,0:20:50.91:0,51,1153	0/0:34,1:39:40.87:0,41,1814	0/0:38,0:46:85.97:0,86,1770	0/0:30,0:35:63.70:0,64,1157	0/0:27,0:30:56.93:0,57,1246	1/1:8,6:14:24.02:359,24,0	1/1:8,21:30:41.53:786,42,0	1/1:26,30:56:66.01:1070,66,0	0/0:34,0:35:90.03:0,90,1977	0/0:24,1:27:14.05:0,14,1193	0/0:35,0:36:80.99:0,81,1775	0/0:34,0:40:86.10:0,86,1784	0/0:42,1:47:41.16:0,41,1811	1/1:7,28:37:69.23:1098,69,0	0/0:14,0:15:14.26:0,14,426
chr10	106560695	.	CAG	C	1030.32	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.568;DP=801;FS=4.967;HRun=0;HaplotypeScore=114.0393;InbreedingCoeff=0.9998;MQ=79.48;MQ0=0;MQRankSum=-3.589;QD=33.24;ReadPosRankSum=-0.637;VQSLOD=5.6962;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.31:0,90,1711	0/0:17,0:17:48.16:0,48,896	0/0:26,0:26:75.26:0,75,1419	0/0:21,0:20:54.98:0,55,1073	0/0:41,0:41:99:0,120,2299	0/0:20,0:18:60.19:0,60,1124	0/0:25,0:25:72.25:0,72,1391	0/0:39,0:39:99:0,117,2224	1/1:3,28:31:75.24:1125,75,0	0/0:37,0:37:99:0,111,2087	0/0:12,0:12:36.12:0,36,683	0/0:30,0:30:90.30:0,90,1696	0/0:33,0:33:99:0,99,1882	0/0:24,0:24:69.24:0,69,1319	0/0:35,0:35:99:0,102,1917	0/0:39,0:39:99:0,108,2038	0/0:34,0:34:99:0,99,1843	0/0:26,0:26:78.18:0,78,1411	0/0:15,0:15:45.14:0,45,835	0/0:36,0:36:99:0,105,1951	0/0:40,0:40:99:0,111,2017	0/0:23,0:23:69.24:0,69,1328	0/0:23,0:23:66.18:0,66,1167	0/0:26,0:26:78.21:0,78,1434	0/0:36,0:36:99:0,105,2027	0/0:31,0:31:87.30:0,87,1672	0/0:28,0:27:66.21:0,66,1241	0/0:22,0:22:63.19:0,63,1204
chr10	106570341	.	GGA	G	82.14	PASS	AB=0.955;AC=11;AF=0.212;AN=52;BaseQRankSum=3.611;DP=609;FS=15.781;HRun=0;HaplotypeScore=97.9599;InbreedingCoeff=-0.1015;MQ=58.24;MQ0=11;MQRankSum=0.476;QD=0.41;ReadPosRankSum=-0.501;VQSLOD=0.8508;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:44:40.60:0,41,620	0/0:6,0:6:0:0,0,0	./.	./.	0/0:19,0:18:15.05:0,15,221	0/0:20,0:20:11.78:0,12,350	0/0:17,0:17:15.05:0,15,221	0/0:33,0:33:9.41:0,9,83	1/1:15,0:14:2.96:19,3,0	0/1:30,1:32:7.33:7,0,606	0/0:17,0:18:9.03:0,9,122	0/1:17,1:18:11.82:12,0,202	0/1:11,0:11:19.30:19,0,97	0/0:16,0:16:19.21:0,19,235	0/0:31,1:32:12.91:0,13,607	0/1:23,2:25:34.44:34,0,385	0/0:27,0:27:22.01:0,22,308	0/1:26,2:28:52.81:53,0,216	0/0:13,0:13:6:0,6,57	0/0:18,0:18:6.02:0,6,82	0/0:11,0:12:2.98:0,3,21	0/1:17,0:16:17.82:18,0,120	0/1:16,1:17:26.14:26,0,183	0/0:42,1:42:39.34:0,39,913	0/0:11,0:11:9.02:0,9,115	0/0:26,0:26:11:0,11,434	0/1:21,0:21:2.51:3,0,34	0/1:15,1:14:23.88:24,0,32
chr10	106570854	.	GA	G	209.42	PASS	AB=0.845;AC=10;AF=0.179;AN=56;BaseQRankSum=1.749;DP=362;FS=1.653;HRun=16;HaplotypeScore=47.1865;InbreedingCoeff=0.3526;MQ=62.27;MQ0=14;MQRankSum=0.796;QD=3.74;ReadPosRankSum=-2.858;VQSLOD=-0.6913;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:25:30.21:0,30,299	1/1:3,0:3:2:6,2,0	0/0:24,0:6:11.46:0,11,58	0/0:22,0:8:2.69:0,3,8	0/0:8,1:9:0.52:0,1,105	0/0:11,1:11:14.73:0,15,91	0/0:20,0:20:46.68:0,47,369	1/1:5,5:12:4.30:99,4,0	1/1:7,1:8:0.99:31,1,0	0/0:5,0:5:8.36:0,8,58	0/0:10,0:11:26.41:0,26,184	0/0:12,0:12:15.33:0,15,107	0/0:9,0:9:1.43:0,1,84	0/0:10,0:10:5.88:0,6,54	0/0:9,0:9:11.96:0,12,96	0/1:4,1:5:6.04:6,0,59	0/0:23,0:23:24.09:0,24,279	0/0:28,1:29:31.58:0,32,334	1/1:8,8:13:1.36:115,1,0	0/0:4,0:4:0:0,0,0	0/0:7,2:8:0.47:0,0,1	0/0:4,0:4:11.21:0,11,81	0/0:6,0:6:8.36:0,8,58	0/0:25,0:25:30.62:0,31,253	0/0:6,0:6:5.18:0,5,56	0/0:14,0:13:26.87:0,27,210	0/1:10,2:12:40.20:70,0,40	0/0:12,0:11:5.97:0,6,46
chr10	106571684	.	T	TTATA	844.32	PASS	AB=1.000;AC=11;AF=0.239;AN=46;BaseQRankSum=-1.605;DP=211;FS=4.534;HRun=0;HaplotypeScore=46.3768;InbreedingCoeff=0.5231;MQ=103.45;MQ0=3;MQRankSum=-0.207;QD=14.56;ReadPosRankSum=-3.638;VQSLOD=2.0398;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:15.05:0,15,252	./.	0/1:15,0:11:1.17:1,0,69	0/0:35,0:28:3.52:0,4,60	0/0:5,0:5:6.02:0,6,100	0/0:1,0:1:3.01:0,3,50	./.	1/1:17,10:29:32.82:559,33,0	1/1:2,0:2:3.01:74,3,0	0/0:6,0:6:9.03:0,9,150	0/0:7,0:7:12.04:0,12,201	0/0:2,0:2:6.02:0,6,101	0/0:2,0:2:6.01:0,6,75	0/0:1,0:2:3:0,3,28	0/0:5,0:5:12.04:0,12,199	0/0:3,0:4:2.42:0,2,142	0/0:26,0:26:42.90:0,43,765	0/0:19,0:21:38.91:0,39,713	1/1:6,1:6:12:201,12,0	./.	1/1:2,0:2:6.01:71,6,0	./.	0/0:4,0:4:9:0,9,100	./.	0/0:4,0:4:6.02:0,6,101	0/0:1,0:1:3.01:0,3,50	1/1:1,2:3:3.01:74,3,0	0/0:15,0:18:39.07:0,39,554
chr10	106571987	.	ACCC	A	376.81	PASS	AB=0.786;AC=19;AF=0.950;AN=20;BaseQRankSum=-1.222;DP=35;FS=0.000;HRun=3;HaplotypeScore=25.5502;InbreedingCoeff=-0.1935;MQ=179.44;MQ0=2;MQRankSum=-1.571;QD=12.16;ReadPosRankSum=-1.309;VQSLOD=-0.3748;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:2.97:20,3,0	./.	1/1:5,2:7:9.53:75,10,0	0/1:7,2:11:15.91:199,0,16	./.	1/1:2,0:2:5.93:40,6,0	./.	./.	1/1:1,0:1:2.97:20,3,0	./.	./.	./.	1/1:1,0:1:2.97:20,3,0	./.	1/1:1,0:1:2.97:20,3,0	./.	./.	1/1:2,0:2:2.98:21,3,0	./.	./.	1/1:2,0:2:3:25,3,0	./.	1/1:0,0:1:2.88:15,3,0	./.	./.	./.	./.	./.
chr10	106575042	.	GCACA	G	1716.50	PASS	AB=0.836;AC=17;AF=0.327;AN=52;BaseQRankSum=2.637;DP=640;FS=5.549;HRun=0;HaplotypeScore=105.8290;InbreedingCoeff=0.4954;MQ=54.58;MQ0=17;MQRankSum=-1.987;QD=7.24;ReadPosRankSum=-0.528;VQSLOD=2.0455;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:50:62.35:0,62,1042	1/1:5,1:7:9.02:123,9,0	./.	./.	0/1:17,1:18:14.21:14,0,677	0/1:21,1:25:31.75:32,0,439	0/0:21,0:25:0.24:0,0,545	1/1:26,0:25:11.65:115,12,0	0/0:24,0:27:41.54:0,42,763	0/0:15,0:17:11.75:0,12,136	0/0:13,0:14:18.05:0,18,332	0/0:14,0:16:32.85:0,33,666	0/0:17,0:18:36.11:0,36,760	0/0:15,0:16:23.80:0,24,456	0/0:30,0:32:53.36:0,53,964	0/0:21,0:24:20.39:0,20,360	0/1:28,2:31:58.82:59,0,532	0/0:14,0:21:20.72:0,21,361	1/1:8,5:14:16.86:215,17,0	1/1:11,4:15:6.02:95,6,0	1/1:44,14:58:64.10:914,64,0	0/0:17,0:17:30.10:0,30,647	0/0:10,0:10:11.78:0,12,196	0/0:33,0:39:70.39:0,70,1278	0/0:12,0:13:23.87:0,24,480	0/1:12,1:15:23.84:24,0,308	1/1:11,10:22:18.05:265,18,0	0/1:2,1:5:6.46:42,0,6
chr10	106579562	.	GT	G	2125.85	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=4.713;DP=416;FS=2.070;HRun=8;HaplotypeScore=64.9080;InbreedingCoeff=0.9394;MQ=69.63;MQ0=0;MQRankSum=-0.282;QD=22.62;ReadPosRankSum=-0.019;VQSLOD=4.1724;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.17:0,54,650	1/1:2,5:7:20.95:190,21,0	0/0:18,0:8:9.02:0,9,106	0/0:25,0:18:20.62:0,21,213	0/0:19,0:19:54.10:0,54,633	0/0:13,0:13:39.12:0,39,471	0/0:7,0:7:17.08:0,17,187	1/1:1,23:24:69.11:665,69,0	1/1:0,7:7:12.02:116,12,0	0/0:21,0:21:63.19:0,63,761	0/0:20,0:20:57.08:0,57,657	0/0:10,0:10:29.25:0,29,303	0/0:5,0:4:11.97:0,12,116	0/0:6,0:6:15.05:0,15,181	0/0:14,0:14:39.12:0,39,471	0/0:14,1:15:15.65:0,16,450	0/0:34,0:34:99:0,99,1130	0/0:16,1:17:13.13:0,13,424	1/1:2,9:11:14.96:234,15,0	1/1:2,10:12:9.87:288,10,0	1/1:2,9:11:24.03:232,24,0	0/0:5,0:5:15.05:0,15,181	0/0:11,0:11:33.10:0,33,398	0/0:5,0:5:9.03:0,9,108	0/0:22,0:22:60.18:0,60,710	0/0:16,0:16:38.99:0,39,449	1/1:3,19:22:62.97:593,63,0	0/0:18,1:19:25.13:0,25,565
chr10	106580356	.	CTT	C	1944.79	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=6.858;DP=506;FS=2.901;HRun=12;HaplotypeScore=71.6453;InbreedingCoeff=0.9752;MQ=75.22;MQ0=4;MQRankSum=-0.068;QD=17.84;ReadPosRankSum=2.979;VQSLOD=2.9933;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:83.76:0,84,1192	1/1:3,1:4:6:56,6,0	0/0:45,1:22:32.23:0,32,293	0/0:30,0:12:19.32:0,19,183	0/0:17,0:19:44.61:0,45,590	0/0:11,0:11:27.08:0,27,367	0/0:13,0:13:30.09:0,30,431	1/1:11,14:23:22.22:369,22,0	1/1:2,13:15:36.07:366,36,0	0/0:14,0:14:30.09:0,30,429	0/0:11,0:12:24.05:0,24,303	0/0:13,0:13:30.10:0,30,447	0/0:15,0:15:42.10:0,42,602	0/0:14,0:15:33:0,33,454	0/0:19,0:19:51.17:0,51,755	0/0:15,0:15:43.38:0,43,614	0/0:37,0:36:96.30:0,96,1378	0/0:21,0:21:49.98:0,50,721	1/1:4,11:18:41.28:371,41,0	1/1:3,11:14:30.05:305,30,0	1/1:1,8:9:21.04:214,21,0	0/0:10,0:10:27.09:0,27,402	0/0:8,0:9:17.52:0,18,191	0/0:14,0:14:30.10:0,30,447	0/0:13,0:13:33.11:0,33,492	0/0:21,0:21:51.17:0,51,757	1/1:5,19:24:44.97:458,45,0	0/0:14,0:14:39.09:0,39,514
chr10	106587209	.	CAGCCAA	C	3756.91	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.344;DP=441;FS=4.562;HRun=0;HaplotypeScore=105.8171;InbreedingCoeff=0.9917;MQ=75.08;MQ0=0;MQRankSum=-11.329;QD=54.45;ReadPosRankSum=-2.381;VQSLOD=3.2885;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,4142	1/1:0,10:10:27.05:610,27,0	0/0:15,0:15:42.13:0,42,1369	0/0:4,0:4:12.04:0,12,386	0/0:23,0:23:66.23:0,66,2409	0/0:16,0:16:48.16:0,48,1684	0/0:13,0:13:39.13:0,39,1428	1/1:3,11:14:36.03:778,36,0	0/0:13,0:13:36.11:0,36,1208	0/0:19,0:19:54.19:0,54,1954	0/0:7,0:7:21.07:0,21,767	0/0:17,0:17:51.18:0,51,1865	0/0:12,0:12:36.11:0,36,1233	0/0:13,0:13:36.11:0,36,1234	0/0:19,0:19:57.18:0,57,1969	0/0:18,0:18:51.16:0,51,1780	0/0:28,0:28:81.28:0,81,2925	0/0:23,0:23:66.23:0,66,2414	1/1:4,7:11:30.01:583,30,0	1/1:0,8:8:24.08:587,24,0	1/1:9,7:16:27.04:516,27,0	0/0:16,0:16:48.16:0,48,1748	0/0:15,0:15:42.14:0,42,1488	0/0:17,0:17:51.18:0,51,1868	0/0:16,0:16:48.16:0,48,1693	0/0:16,0:16:48.16:0,48,1760	1/1:1,9:10:30.06:683,30,0	0/0:10,0:10:30.10:0,30,1096
chr10	106587232	.	CA	C	1733.15	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.908;DP=443;FS=0.698;HRun=6;HaplotypeScore=65.6125;InbreedingCoeff=0.9912;MQ=81.19;MQ0=0;MQRankSum=-8.832;QD=24.41;ReadPosRankSum=-2.042;VQSLOD=2.6975;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1342	1/1:1,7:8:21.05:225,21,0	0/0:20,0:20:42.10:0,42,527	0/0:9,0:9:16.40:0,16,243	0/0:26,0:26:78.25:0,78,1024	0/0:17,0:17:42.14:0,42,550	0/0:14,0:14:36.12:0,36,474	1/1:0,18:18:51.13:547,51,0	0/0:12,0:12:33.11:0,33,432	0/0:20,0:20:57.19:0,57,749	0/0:11,0:11:30.10:0,30,393	0/0:17,0:17:48.16:0,48,632	0/0:9,0:9:21.05:0,21,261	0/0:12,0:12:27.08:0,27,341	0/0:17,0:17:45.15:0,45,590	0/0:13,0:13:36.12:0,36,472	0/0:27,0:27:78.25:0,78,1024	0/0:24,0:24:66.21:0,66,866	1/1:2,10:12:30.05:313,30,0	1/1:1,9:10:30.08:322,30,0	1/1:1,11:12:14.19:159,14,0	0/0:18,0:18:54.18:0,54,708	0/0:12,0:12:33.11:0,33,434	0/0:14,0:14:42.13:0,42,537	0/0:16,0:16:45.06:0,45,568	0/0:18,0:18:51.16:0,51,659	1/1:0,11:11:33.08:354,33,0	0/0:10,0:10:30.10:0,30,395
chr10	106587317	.	ACAG	A	712.08	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=5.655;DP=294;FS=1.803;HRun=0;HaplotypeScore=53.1632;InbreedingCoeff=0.7032;MQ=85.93;MQ0=6;MQRankSum=-3.345;QD=18.74;ReadPosRankSum=-2.312;VQSLOD=2.9995;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:45.14:0,45,981	1/1:2,0:2:3.01:36,3,0	0/0:23,0:10:9.54:0,10,60	0/0:57,1:28:15.59:0,16,258	0/0:9,0:9:21.07:0,21,482	0/0:8,0:8:18.05:0,18,368	0/0:4,0:4:12.04:0,12,277	1/1:18,2:19:38.71:515,39,0	1/1:3,0:3:3.01:51,3,0	0/0:2,0:2:6.02:0,6,137	0/0:4,0:4:9.03:0,9,205	0/0:3,0:3:6.02:0,6,136	0/0:6,0:6:18.06:0,18,408	0/0:3,0:3:9.03:0,9,200	0/0:5,0:5:15.04:0,15,289	0/0:2,0:2:6.02:0,6,100	0/0:31,0:30:84.28:0,84,1818	0/0:32,0:32:90.29:0,90,2016	1/1:4,1:5:6.01:77,6,0	1/1:1,0:1:2.88:15,3,0	./.	0/0:3,0:3:9.03:0,9,205	0/0:2,0:2:3.01:0,3,69	0/0:6,0:6:12.04:0,12,272	0/0:10,0:10:24.08:0,24,553	0/0:11,0:11:30.10:0,30,681	1/1:5,2:7:14.53:171,15,0	0/0:10,0:10:30.10:0,30,681
chr10	106587319	.	AG	A	530.29	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=6.348;DP=282;FS=4.468;HRun=1;HaplotypeScore=44.0570;InbreedingCoeff=0.6799;MQ=85.78;MQ0=6;MQRankSum=-2.492;QD=16.07;ReadPosRankSum=-2.472;VQSLOD=2.7732;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:45.14:0,45,694	1/1:0,2:2:3.01:39,3,0	0/0:24,0:9:5.91:0,6,30	0/0:57,0:28:21.47:0,21,256	0/0:7,0:7:21.07:0,21,336	0/0:8,0:8:18.05:0,18,265	0/0:4,0:4:12.04:0,12,192	1/1:3,16:18:36.05:399,36,0	1/1:0,2:2:3:26,3,0	0/0:2,0:2:6.02:0,6,96	0/0:3,0:3:9.03:0,9,144	0/0:3,0:3:6.02:0,6,96	0/0:6,0:6:18.06:0,18,288	0/0:3,0:3:9.03:0,9,144	0/0:5,0:5:15.04:0,15,217	0/0:2,0:2:6.02:0,6,93	0/0:30,0:29:84.29:0,84,1329	0/0:32,0:32:90.31:0,90,1435	1/1:2,1:3:3.01:32,3,0	1/1:0,1:1:3.01:39,3,0	./.	0/0:3,0:3:9.03:0,9,144	0/0:2,0:2:3.01:0,3,48	0/0:6,0:6:12.04:0,12,192	0/0:10,0:10:24.08:0,24,382	0/0:10,0:10:30.10:0,30,480	1/1:3,3:6:14.24:147,14,0	0/0:10,0:10:30.10:0,30,480
chr10	106587352	.	GCACATACACACA	G	1234.79	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=4.300;DP=232;FS=2.038;HRun=0;HaplotypeScore=73.2483;InbreedingCoeff=0.6857;MQ=54.18;MQ0=8;MQRankSum=-6.664;QD=33.37;ReadPosRankSum=-2.502;VQSLOD=2.0507;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:33.10:0,33,1605	1/1:3,2:5:3.01:113,3,0	0/0:14,0:2:2.99:0,3,25	0/0:16,0:4:9.03:0,9,334	0/0:5,0:5:15.05:0,15,924	0/0:8,0:8:15.04:0,15,764	0/0:6,0:6:18.04:0,18,892	1/1:15,2:17:33.10:688,33,0	1/1:3,0:3:3.01:75,3,0	0/0:6,0:5:15.02:0,15,618	0/0:2,0:2:6.02:0,6,370	0/0:3,0:3:6.02:0,6,370	0/0:8,0:8:24.08:0,24,1162	0/0:2,0:2:3.01:0,3,177	0/0:4,0:4:12.04:0,12,599	0/0:3,0:3:9.03:0,9,412	0/0:31,0:30:84.15:0,84,4111	0/0:29,0:29:84.24:0,84,4166	1/1:6,1:5:5.72:146,6,0	./.	./.	0/0:3,0:3:9.03:0,9,446	0/0:4,0:4:9.03:0,9,520	0/0:10,0:10:24.08:0,24,1305	0/0:8,0:9:21.07:0,21,1002	0/0:5,0:5:12.04:0,12,637	1/1:2,3:5:12:358,12,0	0/0:8,0:8:24.08:0,24,1278
chr10	106587460	.	TCG	T	1642.72	PASS	AB=1.000;AC=15;AF=0.300;AN=50;BaseQRankSum=2.062;DP=122;FS=5.274;HRun=0;HaplotypeScore=18.7523;InbreedingCoeff=0.6501;MQ=77.23;MQ0=2;MQRankSum=0.434;QD=28.82;ReadPosRankSum=-2.125;VQSLOD=3.3857;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,3:3:5.98:69,6,0	0/0:11,0:4:5.54:0,6,171	0/0:11,0:6:9.03:0,9,139	0/0:1,0:1:3.01:0,3,59	0/0:1,0:1:3.01:0,3,60	0/0:5,0:5:8.56:0,9,162	1/1:0,15:15:42.11:646,42,0	1/1:3,4:7:21.07:339,21,0	0/0:2,0:2:6.02:0,6,121	0/1:2,0:2:0:0,0,0	0/0:2,0:2:5.97:0,6,45	0/0:4,0:4:12.02:0,12,197	0/0:2,0:2:3.01:0,3,58	0/0:4,0:4:12.04:0,12,226	0/0:3,0:3:9.03:0,9,148	0/0:3,0:3:9.02:0,9,140	0/0:3,0:3:9.03:0,9,176	1/1:3,3:6:18.05:261,18,0	1/1:0,3:3:8.99:117,9,0	1/1:0,13:13:17.98:235,18,0	./.	./.	0/0:5,0:5:15.05:0,15,283	0/0:3,0:3:3:0,3,28	0/0:2,0:2:3.01:0,3,51	1/1:0,8:8:9.03:140,9,0	0/0:2,0:2:6:0,6,81
chr10	106591027	.	GT	G	6761.51	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.936;DP=668;FS=0.672;HRun=1;HaplotypeScore=65.1981;InbreedingCoeff=0.9988;MQ=84.97;MQ0=0;MQRankSum=-1.679;QD=38.42;ReadPosRankSum=-0.883;VQSLOD=4.9497;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,2009	1/1:0,7:7:21.03:271,21,0	0/0:16,0:16:48.12:0,48,694	0/0:25,0:25:75.07:0,75,1043	0/0:19,0:19:57.19:0,57,909	0/0:19,0:18:54.17:0,54,839	0/0:33,0:33:99:0,99,1488	1/1:0,21:21:63.21:881,63,0	1/1:0,27:27:81.27:1125,81,0	0/0:28,0:28:84.25:0,84,1291	0/0:11,0:11:33.10:0,33,504	0/0:35,0:35:99:0,102,1628	0/0:11,0:11:33.10:0,33,504	0/0:27,0:27:81.23:0,81,1251	0/0:36,0:36:99:0,108,1717	0/0:22,0:22:66.21:0,66,1030	0/0:36,0:36:99:0,105,1665	0/0:22,0:22:66.22:0,66,1050	1/1:0,20:20:57.16:760,57,0	1/1:0,14:14:39.13:540,39,0	1/1:0,62:62:99:2307,166,0	0/0:16,0:16:45.15:0,45,712	0/0:13,0:13:39.12:0,39,599	0/0:27,0:27:81.25:0,81,1267	0/0:21,0:21:63.20:0,63,979	0/0:24,0:24:72.25:0,72,1149	1/1:1,24:24:63.21:877,63,0	0/0:8,0:8:24.06:0,24,359
chr10	106591361	.	G	GTTTT	2002.46	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.534;DP=457;FS=3.065;HRun=9;HaplotypeScore=83.8874;InbreedingCoeff=0.8545;MQ=71.36;MQ0=8;MQRankSum=-8.984;QD=25.03;ReadPosRankSum=-4.815;VQSLOD=0.5615;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:69.11:0,69,965	1/1:6,0:6:6.02:120,6,0	0/0:19,0:9:17.23:0,17,154	0/0:21,0:12:16.54:0,17,202	0/0:28,0:28:75.18:0,75,1053	0/0:14,0:14:39.11:0,39,556	0/0:11,0:11:27.04:0,27,375	1/1:26,0:25:42.08:779,42,0	1/1:6,0:6:6.02:101,6,0	0/0:18,0:18:39.01:0,39,541	0/0:14,0:14:17.87:0,18,252	0/0:16,0:16:45.14:0,45,656	0/0:15,0:15:29.99:0,30,438	0/0:10,0:10:24.07:0,24,351	0/0:15,0:15:30:0,30,421	0/0:16,0:17:45.03:0,45,596	0/0:28,0:29:73.41:0,73,1034	0/0:19,0:20:51.12:0,51,746	1/1:8,4:13:30.07:583,30,0	1/1:7,0:7:3.01:62,3,0	1/1:9,0:9:9.03:180,9,0	0/0:6,0:6:6:0,6,88	0/0:22,0:21:57.17:0,57,807	0/0:15,0:15:36.10:0,36,526	0/0:21,0:20:15.23:0,15,542	0/0:12,0:11:2.52:0,3,367	1/1:11,0:12:18.53:356,19,0	0/0:23,0:23:59.82:0,60,832
chr10	106591370	.	T	TTTTTG	2527.50	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=3.308;DP=468;FS=0.561;HRun=0;HaplotypeScore=92.8082;InbreedingCoeff=0.8492;MQ=66.86;MQ0=12;MQRankSum=-7.752;QD=26.61;ReadPosRankSum=-5.047;VQSLOD=2.5171;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:78.09:0,78,1332	0/1:4,0:4:14.36:69,0,14	0/0:23,0:9:20.13:0,20,179	0/0:24,0:8:16.57:0,17,235	0/0:29,0:29:81.19:0,81,1445	0/0:13,0:14:41.79:0,42,739	0/0:11,0:11:30.05:0,30,550	1/1:3,14:25:60.08:1142,60,0	1/1:1,0:11:5.79:164,6,0	0/0:14,0:14:42.07:0,42,659	0/0:13,0:12:20.92:0,21,358	0/0:16,0:16:48.14:0,48,858	0/0:15,0:15:38.95:0,39,646	0/0:10,0:10:24.07:0,24,464	0/0:14,0:14:36.01:0,36,613	0/0:17,0:17:45.09:0,45,802	0/0:26,0:26:75.17:0,75,1407	0/0:20,0:20:51.12:0,51,1005	1/1:12,0:13:26.50:417,26,0	1/1:1,6:11:17.88:204,18,0	1/1:3,7:11:9.03:209,9,0	0/0:4,0:3:9:0,9,125	0/0:21,0:20:56.98:0,57,981	0/0:13,0:13:39.11:0,39,726	0/0:20,0:19:24.21:0,24,740	0/0:16,0:15:17.33:0,17,588	1/1:2,12:19:18.64:504,19,0	0/0:25,0:25:67.48:0,67,1183
chr10	106591647	.	GTAAA	G	3776.10	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.228;DP=471;FS=2.853;HRun=0;HaplotypeScore=85.2693;InbreedingCoeff=0.9849;MQ=66.81;MQ0=0;MQRankSum=-2.020;QD=34.96;ReadPosRankSum=-0.304;VQSLOD=3.2903;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.16:0,48,1180	1/1:0,10:10:24.08:401,24,0	0/0:13,0:12:19.87:0,20,323	0/0:13,0:14:13.71:0,14,228	0/0:25,0:25:63.22:0,63,1539	0/0:25,0:25:66.23:0,66,1572	0/0:16,0:16:33.11:0,33,817	1/1:9,18:27:54.15:826,54,0	1/1:4,10:14:27.09:454,27,0	0/0:24,0:24:54.19:0,54,1341	0/0:25,0:25:54.16:0,54,1260	0/0:14,0:14:39.13:0,39,967	0/0:9,0:9:27.09:0,27,667	0/0:9,0:9:15.05:0,15,372	0/0:14,0:14:36.12:0,36,892	0/0:21,0:21:54.17:0,54,1289	0/0:24,0:24:51.17:0,51,1240	0/0:18,0:18:42.14:0,42,1039	1/1:4,11:15:33.10:529,33,0	1/1:2,17:19:51.17:859,51,0	1/1:2,5:7:12.04:203,12,0	0/0:8,0:8:21.07:0,21,521	0/0:19,0:19:39.56:0,40,915	0/0:16,0:16:36.12:0,36,885	0/0:14,0:14:39.13:0,39,937	0/0:18,0:18:45.15:0,45,1093	1/1:2,14:16:29.92:505,30,0	0/0:17,0:17:51.16:0,51,1214
chr10	106592134	.	GC	G	7262.23	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=17.598;DP=754;FS=0.306;HRun=2;HaplotypeScore=96.8237;InbreedingCoeff=1.0000;MQ=87.86;MQ0=0;MQRankSum=-3.745;QD=36.68;ReadPosRankSum=-0.542;VQSLOD=4.6987;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,2045	1/1:0,17:17:45.14:579,45,0	0/0:33,0:33:93.07:0,93,1322	0/0:27,0:27:75.25:0,75,1091	0/0:28,0:28:84.28:0,84,1258	0/0:22,0:22:63.21:0,63,935	0/0:26,0:26:78.25:0,78,1147	1/1:1,29:30:87.28:1130,87,0	1/1:0,16:16:48.16:623,48,0	0/0:22,0:22:66.22:0,66,982	0/0:22,0:22:66.22:0,66,988	0/0:28,0:28:81.27:0,81,1205	0/0:25,0:25:75.25:0,75,1123	0/0:24,0:24:72.24:0,72,1079	0/0:36,0:36:99:0,105,1571	0/0:34,0:34:99:0,99,1483	0/0:21,0:21:63.21:0,63,944	0/0:23,0:23:69.23:0,69,1033	1/1:1,25:26:75.20:941,75,0	1/1:2,33:35:99:1283,99,0	1/1:3,36:39:99:1424,111,0	0/0:35,0:35:99:0,102,1517	0/0:21,0:21:63.21:0,63,942	0/0:27,0:27:81.22:0,81,1133	0/0:21,0:21:63.21:0,63,943	0/0:20,0:20:54.18:0,54,810	1/1:0,35:35:99:1281,99,0	0/0:13,0:13:39.13:0,39,582
chr10	106593476	.	CTT	C	3141.42	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=10.811;DP=584;FS=2.349;HRun=12;HaplotypeScore=80.2269;InbreedingCoeff=0.9341;MQ=68.93;MQ0=0;MQRankSum=1.614;QD=19.27;ReadPosRankSum=0.835;VQSLOD=3.1930;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:72.20:0,72,1030	1/1:1,13:14:30.06:305,30,0	0/0:26,0:17:10.33:0,10,203	0/1:17,0:10:0.13:0,0,110	0/0:21,0:24:56.04:0,56,727	0/0:29,0:30:68.72:0,69,990	0/0:14,0:14:33.10:0,33,472	1/1:6,17:23:48.04:481,48,0	1/1:6,19:25:57.09:580,57,0	0/0:22,0:27:65.67:0,66,864	0/0:14,0:16:45.10:0,45,628	0/0:16,0:17:45.15:0,45,654	0/0:19,0:20:44.44:0,44,625	0/0:16,0:16:42.11:0,42,601	0/0:23,0:24:71.66:0,72,969	0/0:16,0:16:42.14:0,42,624	0/0:30,0:31:75.23:0,75,1074	0/0:13,0:13:39.11:0,39,550	1/1:10,19:29:60.03:598,60,0	1/1:1,23:24:66.11:669,66,0	1/1:4,3:7:8.98:92,9,0	0/0:20,0:21:42.09:0,42,580	0/0:15,0:16:41.61:0,42,569	0/0:9,0:11:30.09:0,30,428	0/0:22,0:22:60.19:0,60,875	0/0:27,0:27:72.11:0,72,1035	1/1:2,22:24:60.13:610,60,0	0/0:17,0:17:45.14:0,45,646
chr10	106593731	.	CCCCCCCA	C	1192.93	PASS	AB=0.986;AC=11;AF=0.196;AN=56;BaseQRankSum=6.700;DP=382;FS=12.180;HRun=0;HaplotypeScore=94.5444;InbreedingCoeff=0.5416;MQ=78.25;MQ0=4;MQRankSum=-7.195;QD=12.97;ReadPosRankSum=5.937;VQSLOD=0.8644;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:33.06:0,33,463	0/1:6,0:6:8.37:142,0,8	0/0:42,0:22:29.10:0,29,819	0/0:29,0:15:32.77:0,33,449	0/0:2,0:2:3:0,3,25	0/0:10,0:10:17.59:0,18,339	0/0:24,0:24:43.56:0,44,834	1/1:9,1:9:15:187,15,0	0/1:5,0:5:6.52:7,0,204	0/0:9,0:8:9.01:0,9,95	0/0:7,0:7:12.49:0,12,187	0/0:21,0:21:33.08:0,33,602	0/0:11,0:11:12.04:0,12,230	0/0:5,0:5:10.63:0,11,231	0/0:16,0:16:37.93:0,38,777	0/0:14,0:14:33.06:0,33,556	0/0:23,0:23:33.07:0,33,776	0/0:19,0:19:31.86:0,32,582	1/1:9,1:9:20.36:255,20,0	1/1:15,2:17:38.89:461,39,0	0/1:22,1:21:27.98:116,0,28	0/0:5,0:5:8.99:0,9,135	0/0:6,0:6:15.04:0,15,236	0/0:9,0:9:15.51:0,16,344	0/0:7,0:7:18.04:0,18,303	0/0:5,0:5:12.04:0,12,239	1/1:21,0:21:0.35:183,0,0	0/0:8,0:8:13.29:0,13,236
chr10	106593732	.	CCCCCCA	C	2085.58	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=4.889;DP=382;FS=11.552;HRun=0;HaplotypeScore=85.7816;InbreedingCoeff=0.7754;MQ=78.13;MQ0=4;MQRankSum=-7.012;QD=23.97;ReadPosRankSum=5.965;VQSLOD=2.0010;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:32.94:0,33,325	1/1:5,1:6:12:228,12,0	0/0:44,0:23:35.98:0,36,714	0/0:29,0:15:32.51:0,33,406	0/0:2,0:2:3:0,3,25	0/0:11,0:11:21.04:0,21,300	0/0:25,0:25:45.57:0,46,678	1/1:7,2:8:15.03:290,15,0	0/1:5,0:5:6.55:7,0,162	0/0:9,0:8:2.99:0,3,24	0/0:6,0:6:6.48:0,6,106	0/0:23,0:23:36:0,36,504	0/0:10,0:10:12.03:0,12,167	0/0:5,0:5:10.65:0,11,172	0/0:15,0:15:37.34:0,37,640	0/0:16,0:16:30.05:0,30,426	0/0:23,0:23:27.05:0,27,595	0/0:20,0:20:31.37:0,31,436	1/1:5,5:9:21.05:364,21,0	1/1:9,7:16:38.97:662,39,0	1/1:16,4:18:9.79:286,10,0	0/0:5,0:5:8.06:0,8,92	0/0:6,0:6:15.01:0,15,174	0/0:8,0:8:15.51:0,16,286	0/0:7,0:7:15.03:0,15,231	0/0:5,0:5:12.03:0,12,178	1/1:8,13:21:20.55:428,21,0	0/0:8,0:8:12.92:0,13,176
chr10	106593733	.	CCCCCA	C	1362.77	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=5.993;DP=374;FS=9.591;HRun=0;HaplotypeScore=80.5089;InbreedingCoeff=0.7827;MQ=76.34;MQ0=4;MQRankSum=-6.608;QD=14.65;ReadPosRankSum=5.597;VQSLOD=1.2861;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:20.92:0,21,176	1/1:5,1:6:12.02:154,12,0	0/0:42,0:22:28.31:0,28,614	0/0:29,0:14:29.43:0,29,341	0/0:2,0:2:3:0,3,25	0/0:9,0:9:21.02:0,21,228	0/0:25,0:25:39.31:0,39,456	1/1:9,1:9:18.03:217,18,0	0/1:6,0:6:6.57:7,0,118	0/1:9,0:8:0:0,0,0	0/0:6,0:6:6.48:0,6,91	0/0:23,0:23:30:0,30,360	0/0:10,0:10:9.47:0,9,91	0/0:5,0:5:10.51:0,11,107	0/0:15,0:15:33.95:0,34,475	0/0:15,0:15:27.02:0,27,305	0/0:22,0:22:24.05:0,24,465	0/0:20,0:20:21.95:0,22,277	1/1:10,0:9:21.01:244,21,0	1/1:13,2:15:39:459,39,0	1/1:17,0:15:17.52:191,18,0	0/0:6,0:6:10.23:0,10,77	0/0:7,0:7:11.97:0,12,111	0/0:9,0:9:15.46:0,15,221	0/0:7,0:7:14.90:0,15,173	0/0:5,0:5:9.01:0,9,114	1/1:18,2:20:20.75:273,21,0	0/0:8,0:8:12.39:0,12,117
chr10	106593736	.	CCA	C	1023.25	PASS	AB=0.950;AC=19;AF=0.352;AN=54;BaseQRankSum=3.853;DP=347;FS=7.156;HRun=0;HaplotypeScore=62.9415;InbreedingCoeff=0.4742;MQ=75.24;MQ0=4;MQRankSum=-4.844;QD=6.73;ReadPosRankSum=3.228;VQSLOD=1.7818;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:14.84:0,15,114	1/1:3,2:5:14.89:110,15,0	0/1:37,0:21:51.04:51,0,338	0/0:28,0:14:24.28:0,24,215	0/0:3,0:3:5.99:0,6,49	0/0:9,0:9:0.25:0,0,60	0/0:22,0:22:17.27:0,17,149	1/1:11,2:11:23.87:182,24,0	0/1:10,0:10:6.73:33,0,7	./.	0/0:4,0:4:5.99:0,6,48	0/0:23,0:23:0.88:0,1,139	0/0:9,0:9:0.39:0,0,1	1/1:6,0:6:5.97:45,6,0	0/1:12,0:12:3.23:3,0,164	0/0:12,0:12:13.70:0,14,115	0/0:20,0:20:10.24:0,10,220	0/0:18,0:18:9.83:0,10,110	1/1:8,1:8:20.80:146,21,0	1/1:12,1:13:38.63:265,39,0	1/1:13,2:13:22.88:168,23,0	0/0:7,0:7:5.47:0,5,45	0/0:5,0:5:8.90:0,9,69	0/0:11,0:11:12.42:0,12,118	0/1:4,2:6:27.21:27,0,62	0/0:6,0:6:8.89:0,9,80	1/1:15,2:17:20.83:152,21,0	0/1:8,0:8:2.49:19,0,2
chr10	106594612	.	C	CA	1930.43	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=12.130;DP=644;FS=0.000;HRun=2;HaplotypeScore=112.6006;InbreedingCoeff=0.7996;MQ=55.49;MQ0=7;MQRankSum=-4.529;QD=9.46;ReadPosRankSum=-2.782;VQSLOD=0.3030;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:46.19:0,46,842	1/1:3,8:12:7.07:201,7,0	0/1:20,0:8:25.50:25,0,135	0/0:19,0:8:16.86:0,17,188	0/0:29,1:30:56.25:0,56,826	0/0:20,0:20:46.61:0,47,535	0/0:20,0:20:49.38:0,49,579	1/1:23,6:28:11.54:280,12,0	1/1:11,15:26:24.47:208,24,0	0/0:36,0:36:96.29:0,96,1159	0/0:22,0:22:63.02:0,63,737	0/0:17,0:17:45.14:0,45,553	0/0:21,0:21:63.17:0,63,738	0/0:19,0:17:43.29:0,43,470	0/0:13,0:13:33.09:0,33,389	0/0:27,0:27:75:0,75,881	0/0:18,0:18:48.34:0,48,567	0/0:21,0:21:33.47:0,33,521	1/1:17,8:23:1.46:299,1,0	1/1:13,24:37:2.30:430,2,0	1/1:13,6:19:12.63:197,13,0	0/0:18,0:18:48.11:0,48,561	0/0:29,0:29:78.20:0,78,853	0/0:23,0:23:63.02:0,63,742	0/0:23,0:23:63.06:0,63,709	0/0:20,1:21:45.36:0,45,564	1/1:28,8:36:27.82:470,28,0	0/0:9,0:9:21.95:0,22,262
chr10	106594614	.	AC	A	1797.97	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=13.366;DP=655;FS=4.368;HRun=1;HaplotypeScore=108.4313;InbreedingCoeff=0.8770;MQ=57.11;MQ0=7;MQRankSum=-6.723;QD=8.99;ReadPosRankSum=-4.956;VQSLOD=-0.7450;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:67.82:0,68,762	1/1:13,0:13:22.07:150,22,0	0/1:20,0:10:2.44:2,0,134	0/0:20,0:9:18.99:0,19,161	0/0:31,0:31:71.23:0,71,865	0/0:21,0:21:40.10:0,40,577	0/0:21,0:21:47.68:0,48,512	1/1:25,2:26:48.58:334,49,0	1/1:25,0:25:37.07:244,37,0	0/0:35,0:35:86.67:0,87,1034	0/0:22,0:22:65.79:0,66,711	0/0:19,0:19:45.07:0,45,559	0/0:23,0:23:60.79:0,61,648	0/0:20,0:19:29.29:0,29,377	0/0:13,0:13:35.51:0,36,380	0/0:28,0:28:69.32:0,69,779	0/0:18,0:19:42.45:0,42,499	0/0:22,0:22:37.68:0,38,475	1/1:22,2:23:23.31:278,23,0	1/1:37,0:37:54.33:378,54,0	1/1:15,2:17:37.39:233,37,0	0/0:18,0:18:35.55:0,36,441	0/0:28,0:28:59.44:0,59,758	0/0:24,0:24:58.74:0,59,635	0/0:23,1:24:35.08:0,35,619	0/0:23,1:24:2.08:0,2,512	1/1:35,2:37:63.54:373,64,0	0/0:9,0:9:3.17:0,3,275
chr10	106594615	.	C	CA	1955.57	PASS	AB=0.980;AC=16;AF=0.286;AN=56;BaseQRankSum=11.854;DP=661;FS=7.013;HRun=11;HaplotypeScore=111.7122;InbreedingCoeff=0.8084;MQ=57.26;MQ0=7;MQRankSum=-5.157;QD=8.77;ReadPosRankSum=-3.867;VQSLOD=1.6099;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:44.98:0,45,388	1/1:13,0:13:7.69:201,8,0	0/1:19,0:10:7.27:7,0,57	0/0:19,0:9:8.51:0,9,87	0/0:29,1:30:40.90:0,41,493	0/0:19,1:22:8.90:0,9,324	0/0:20,0:21:43.72:0,44,326	1/1:27,0:27:11.84:263,12,0	1/1:25,0:25:25.03:208,25,0	0/0:34,0:35:73.66:0,74,561	0/0:23,0:23:47.74:0,48,370	0/0:19,0:19:44.79:0,45,348	0/0:23,0:23:53.72:0,54,415	0/0:21,0:20:26.64:0,27,208	0/0:14,0:14:26.84:0,27,206	0/0:27,0:28:59.63:0,60,457	0/0:20,0:20:32.66:0,33,255	0/0:22,0:22:32.27:0,32,247	1/1:24,0:23:15.11:310,15,0	1/1:36,0:36:7.02:437,7,0	1/1:17,0:17:14.97:202,15,0	0/0:17,0:19:36.88:0,37,267	0/0:22,4:27:12.64:0,13,390	0/0:25,0:25:38.78:0,39,302	0/0:24,1:25:23.18:0,23,349	0/1:23,1:24:0.75:1,0,297	1/1:38,0:38:35.30:513,35,0	0/0:10,0:10:23.85:0,24,186
chr10	106595542	.	T	TGATA	11712.14	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-12.634;DP=765;FS=5.743;HRun=0;HaplotypeScore=118.5293;InbreedingCoeff=0.9988;MQ=69.80;MQ0=1;MQRankSum=-7.210;QD=61.64;ReadPosRankSum=-1.366;VQSLOD=6.5152;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,104,1975	1/1:0,9:9:21.07:560,21,0	0/0:19,0:19:54.19:0,54,999	0/0:20,0:19:57.20:0,57,1047	0/0:36,0:36:99:0,102,1904	0/0:23,0:23:69.24:0,69,1279	0/0:25,0:25:69.21:0,69,1248	1/1:6,24:25:57.20:1416,57,0	1/1:1,22:24:63.22:1670,63,0	0/0:32,0:32:96.33:0,96,1791	0/0:25,0:25:72.24:0,72,1301	0/0:17,0:17:51.17:0,51,951	0/0:23,0:23:69.24:0,69,1263	0/0:26,0:26:72.23:0,72,1312	0/0:46,0:46:99:0,129,2369	0/0:38,0:38:99:0,111,2026	0/0:41,0:39:99:0,117,2176	0/0:17,0:17:51.17:0,51,951	1/1:7,16:23:69.21:1688,69,0	1/1:0,31:31:66.23:1760,66,0	1/1:5,26:32:72.20:1854,72,0	0/0:12,0:12:30.10:0,30,559	0/0:27,0:27:75.24:0,75,1355	0/0:37,0:37:99:0,102,1868	0/0:27,0:27:69.24:0,69,1282	0/0:35,0:35:99:0,99,1815	1/1:4,33:39:99:2764,105,0	0/0:8,0:8:24.08:0,24,445
chr10	106597293	.	A	AAG	1011.36	PASS	AB=0.831;AC=7;AF=0.125;AN=56;BaseQRankSum=8.298;DP=752;FS=0.000;HRun=0;HaplotypeScore=99.9690;InbreedingCoeff=0.0345;MQ=43.37;MQ0=62;MQRankSum=-1.745;QD=5.78;ReadPosRankSum=1.069;VQSLOD=2.9514;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:38:35.11:0,35,457	0/1:8,0:10:10.55:55,0,11	0/0:45,0:9:26.88:0,27,245	0/0:38,0:8:0.59:0,1,26	0/0:39,0:35:74.14:0,74,597	0/0:30,0:26:57.01:0,57,570	0/0:29,0:29:74.80:0,75,674	0/1:36,0:34:61.83:236,0,62	0/1:21,0:20:1.58:128,0,2	0/0:33,0:26:65.81:0,66,627	0/0:20,0:20:46.24:0,46,390	0/0:21,0:20:27.36:0,27,246	0/0:13,0:12:22.49:0,22,213	0/0:21,0:21:47.87:0,48,415	0/0:21,0:19:34.16:0,34,317	0/0:23,0:22:49.11:0,49,380	0/0:47,0:41:72.69:0,73,597	0/0:29,0:24:49.09:0,49,424	0/1:15,1:21:99:195,0,119	0/1:18,8:23:19.17:182,0,19	0/1:12,0:11:7.57:54,0,8	0/0:18,0:18:38.04:0,38,309	0/0:21,0:20:48:0,48,477	0/0:29,0:26:50.70:0,51,464	0/0:26,0:24:58.83:0,59,486	0/0:23,0:22:56.92:0,57,525	0/1:19,17:36:10.29:290,0,10	0/0:7,0:6:9.86:0,10,84
chr10	106597302	.	A	AAAGG	3075.38	PASS	AB=0.941;AC=14;AF=0.250;AN=56;BaseQRankSum=0.017;DP=660;FS=2.686;HRun=0;HaplotypeScore=119.3437;InbreedingCoeff=0.7900;MQ=49.91;MQ0=32;MQRankSum=-2.307;QD=15.69;ReadPosRankSum=-1.568;VQSLOD=2.8987;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:54.95:0,55,757	1/1:6,0:6:8.97:99,9,0	0/0:44,0:11:10:0,10,157	0/1:41,0:11:9.62:10,0,80	0/0:35,0:34:66.15:0,66,938	0/0:27,0:25:57.14:0,57,819	0/0:27,0:27:66.11:0,66,945	1/1:36,0:34:42.11:761,42,0	0/1:13,2:14:22.98:443,0,23	0/0:32,0:29:78.19:0,78,1121	0/0:22,0:22:51.03:0,51,683	0/0:16,0:16:20.92:0,21,268	0/0:10,0:10:17.95:0,18,274	0/0:18,0:18:48:0,48,684	0/0:17,0:16:39.02:0,39,495	0/0:17,0:16:26.99:0,27,378	0/0:37,0:34:60.18:0,60,804	0/0:17,0:16:32.92:0,33,426	1/1:26,1:23:47.60:602,48,0	1/1:22,1:23:42.08:510,42,0	1/1:11,0:11:18.40:221,18,0	0/0:15,0:15:35.99:0,36,469	0/0:27,0:26:63.07:0,63,868	0/0:22,0:21:51:0,51,669	0/0:20,0:19:39.06:0,39,534	0/0:23,0:22:57.14:0,57,891	1/1:36,1:35:50.91:619,51,0	0/0:5,0:5:12.02:0,12,163
chr10	106599495	.	G	GC	3621.50	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.380;DP=589;FS=18.386;HRun=1;HaplotypeScore=68.5267;InbreedingCoeff=0.9957;MQ=74.09;MQ0=0;MQRankSum=-3.474;QD=29.68;ReadPosRankSum=-1.494;VQSLOD=1.8435;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.30:0,93,1202	1/1:0,6:6:15.05:189,15,0	0/0:22,0:22:60:0,60,712	0/0:23,0:23:27.57:0,28,618	0/0:30,0:29:81.25:0,81,1028	0/0:18,0:18:54.18:0,54,700	0/0:15,0:15:45.15:0,45,584	1/1:4,18:22:46.88:503,47,0	1/1:0,13:13:39.13:498,39,0	0/0:26,0:26:75.24:0,75,971	0/0:21,0:21:51.17:0,51,657	0/0:24,0:24:72.22:0,72,919	0/0:12,0:12:36.12:0,36,467	0/0:23,0:23:66.21:0,66,849	0/0:13,0:13:39.13:0,39,505	0/0:27,0:27:78.25:0,78,1012	0/0:32,0:32:90.29:0,90,1168	0/0:28,0:28:84.27:0,84,1087	1/1:2,19:21:57.64:714,58,0	1/1:0,11:11:23.51:284,24,0	1/1:2,29:31:72.23:917,72,0	0/0:28,0:28:81.26:0,81,1046	0/0:13,0:13:39.13:0,39,504	0/0:27,0:27:81.25:0,81,1035	0/0:17,0:17:45.15:0,45,581	0/0:30,0:30:81.26:0,81,1048	1/1:2,16:18:42.11:517,42,0	0/0:7,0:7:21.07:0,21,272
chr10	106600632	.	CACAG	C	1115.15	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.838;DP=578;FS=3.931;HRun=0;HaplotypeScore=110.9977;InbreedingCoeff=0.8972;MQ=72.63;MQ0=1;MQRankSum=-2.642;QD=11.86;ReadPosRankSum=-1.603;VQSLOD=2.8059;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:78.18:0,78,1674	1/1:8,0:8:5.57:61,6,0	0/0:46,0:41:38.43:0,38,1174	0/0:52,0:47:43.68:0,44,1058	0/0:13,0:13:30.10:0,30,682	0/0:23,0:23:60.19:0,60,1359	0/0:24,0:24:60.17:0,60,1332	1/1:11,13:24:39.06:573,39,0	1/1:5,10:15:14.68:152,15,0	0/0:24,0:24:66.19:0,66,1534	0/0:13,0:13:21.07:0,21,523	0/0:17,0:17:45.14:0,45,1031	0/0:19,0:19:39.13:0,39,904	0/0:19,0:19:54.19:0,54,1316	0/0:22,0:22:63.15:0,63,1362	0/0:31,0:31:81.26:0,81,1857	0/0:23,0:23:48.16:0,48,1160	0/0:23,0:23:48.16:0,48,1143	1/1:8,6:14:20.80:251,21,0	1/1:6,2:8:1.61:49,2,0	1/1:16,2:18:14.64:151,15,0	0/0:24,0:24:45.14:0,45,1049	0/0:17,0:17:51.13:0,51,1094	0/0:17,0:17:45.14:0,45,1045	0/0:12,0:12:30.10:0,30,724	0/0:23,0:23:51.15:0,51,1200	1/1:6,1:7:3.38:57,3,0	0/0:11,0:11:30.10:0,30,720
chr10	106600672	.	A	AC	694.73	PASS	AB=0.571;AC=11;AF=0.204;AN=54;BaseQRankSum=7.371;DP=488;FS=25.912;HRun=8;HaplotypeScore=75.2453;InbreedingCoeff=0.8151;MQ=83.25;MQ0=1;MQRankSum=-3.580;QD=15.44;ReadPosRankSum=-1.689;VQSLOD=1.7480;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.24:0,72,1004	1/1:1,3:4:9.03:103,9,0	0/0:38,0:32:58.45:0,58,828	0/0:24,0:23:58.63:0,59,594	0/0:11,0:11:30.06:0,30,414	0/0:25,0:25:72.18:0,72,949	0/0:28,0:28:81.25:0,81,1107	1/1:4,6:10:11.13:266,11,0	1/1:7,3:12:21.07:284,21,0	0/0:25,0:25:75.21:0,75,991	0/0:14,0:14:42.13:0,42,571	0/0:27,0:27:81.22:0,81,1063	0/0:10,0:10:30.10:0,30,413	0/0:19,0:19:57.18:0,57,776	0/0:24,0:24:69.21:0,69,928	0/0:19,0:19:57.19:0,57,793	0/0:18,0:18:54.16:0,54,716	0/0:23,0:23:66.22:0,66,902	1/1:1,2:3:9.03:115,9,0	./.	1/1:1,11:11:3.34:45,3,0	0/0:23,0:23:69.22:0,69,930	0/0:16,0:16:48.13:0,48,629	0/0:19,0:19:54.18:0,54,749	0/0:10,0:10:27.05:0,27,344	0/0:27,0:27:78.24:0,78,1056	0/1:1,3:4:11.59:42,0,12	0/0:11,0:11:29.80:0,30,398
chr10	106600803	.	G	GAGC	4592.65	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-9.265;DP=549;FS=8.940;HRun=0;HaplotypeScore=78.9470;InbreedingCoeff=0.9885;MQ=91.41;MQ0=0;MQRankSum=-2.824;QD=40.29;ReadPosRankSum=0.578;VQSLOD=5.7914;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,1879	1/1:2,5:7:12.04:259,12,0	0/0:23,0:23:54.16:0,54,822	0/0:24,0:24:63.21:0,63,980	0/0:18,0:18:54.18:0,54,855	0/0:19,0:19:57.18:0,57,881	0/0:24,0:24:66.18:0,66,976	1/1:4,15:21:51.10:943,51,0	1/1:7,14:21:36.12:785,36,0	0/0:27,0:27:81.27:0,81,1252	0/0:17,0:17:45.10:0,45,664	0/0:19,0:19:51.15:0,51,763	0/0:13,0:13:33.11:0,33,523	0/0:10,0:10:24.06:0,24,357	0/0:19,0:19:45.15:0,45,714	0/0:26,0:26:57.18:0,57,876	0/0:29,0:29:78.27:0,78,1228	0/0:19,0:19:48.15:0,48,738	1/1:3,8:12:27.07:470,27,0	1/1:3,8:12:21.07:447,21,0	1/1:7,26:34:63.22:1377,63,0	0/0:14,0:14:33.11:0,33,515	0/0:7,0:7:18.06:0,18,279	0/0:33,0:33:93.32:0,93,1450	0/0:13,0:13:33.11:0,33,523	0/0:23,0:23:63.20:0,63,966	1/1:2,4:7:15.05:311,15,0	0/0:14,0:14:36.12:0,36,571
chr10	106601012	.	GCT	G	185.57	PASS	AB=0.600;AC=7;AF=0.135;AN=52;BaseQRankSum=4.308;DP=395;FS=10.728;HRun=0;HaplotypeScore=49.2924;InbreedingCoeff=0.7483;MQ=62.36;MQ0=19;MQRankSum=-2.636;QD=4.76;ReadPosRankSum=-1.893;VQSLOD=0.6280;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:27.08:0,27,462	./.	0/0:33,0:8:16.39:0,16,146	0/0:27,0:5:15:0,15,180	0/0:10,0:9:15.05:0,15,278	0/0:12,0:12:30.10:0,30,545	0/0:22,0:21:57.18:0,57,1003	1/1:4,4:8:6.02:80,6,0	0/1:3,6:9:0:0,0,0	0/0:16,0:16:42.14:0,42,749	0/0:9,0:9:21.07:0,21,361	0/0:22,0:22:63.22:0,63,1141	0/0:9,0:9:13.86:0,14,244	0/0:20,0:20:51.17:0,51,883	0/0:13,0:13:33.11:0,33,583	0/0:16,0:16:45.15:0,45,809	0/0:25,0:25:69.21:0,69,1216	0/0:16,0:16:48.13:0,48,844	1/1:8,3:11:17.69:188,18,0	1/1:4,6:10:3.01:36,3,0	0/0:8,13:21:1.41:0,1,2	0/0:13,0:13:27.09:0,27,454	0/0:7,0:7:9.03:0,9,161	0/0:19,0:19:57.20:0,57,1035	0/0:6,0:6:18.06:0,18,306	0/0:13,0:13:39.13:0,39,701	0/0:0,10:10:0:0,0,0	./.
chr10	106601035	.	GAGA	G	1320.22	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=6.438;DP=334;FS=37.941;HRun=0;HaplotypeScore=54.6936;InbreedingCoeff=0.8772;MQ=72.24;MQ0=3;MQRankSum=-1.528;QD=19.41;ReadPosRankSum=-4.927;VQSLOD=0.5691;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.25:0,72,1415	1/1:3,0:3:6.91:99,7,0	0/0:19,0:9:18.03:0,18,350	0/1:12,0:8:1.79:2,0,111	0/0:9,0:9:24.07:0,24,443	0/0:13,0:13:36.12:0,36,761	0/0:17,0:17:51.16:0,51,1017	1/1:0,9:9:27.05:350,27,0	1/1:6,1:7:20.85:214,21,0	0/0:13,0:13:36.12:0,36,730	0/0:11,0:11:33.11:0,33,614	0/0:24,0:24:72.24:0,72,1491	0/0:8,0:8:21.06:0,21,386	0/0:16,0:16:48.16:0,48,1033	0/0:10,0:10:27.04:0,27,511	0/0:15,0:15:42.14:0,42,878	0/0:25,0:25:75.26:0,75,1538	0/0:15,0:15:45.15:0,45,974	1/1:1,6:7:21:222,21,0	1/1:2,0:2:6.01:60,6,0	1/1:21,0:21:38.07:426,38,0	0/0:7,0:7:18.01:0,18,294	0/0:6,0:6:15.05:0,15,283	0/0:14,0:14:39.10:0,39,760	0/0:7,0:7:21.07:0,21,429	0/0:11,0:11:30.10:0,30,624	1/1:6,0:6:13.53:135,14,0	0/0:2,0:2:6.02:0,6,129
chr10	106602456	.	CA	C	4115.27	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.556;DP=460;FS=1.818;HRun=3;HaplotypeScore=44.5393;InbreedingCoeff=0.9944;MQ=71.65;MQ0=0;MQRankSum=-2.319;QD=35.48;ReadPosRankSum=-0.246;VQSLOD=3.7137;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1605	1/1:0,6:6:18.06:223,18,0	0/0:13,0:13:36.09:0,36,481	0/0:18,0:17:42.13:0,42,567	0/0:16,0:16:48.09:0,48,632	0/0:19,0:19:54.17:0,54,760	0/0:20,0:20:60.20:0,60,863	1/1:0,26:26:78.24:955,78,0	1/1:2,16:18:45.14:558,45,0	0/0:12,0:12:36.12:0,36,504	0/0:15,0:15:42.14:0,42,595	0/0:12,0:12:36.12:0,36,517	0/0:12,0:12:36.12:0,36,517	0/0:7,0:7:21.07:0,21,301	0/0:17,0:17:48.16:0,48,691	0/0:13,0:13:39.13:0,39,562	0/0:26,0:26:78.22:0,78,1100	0/0:20,0:20:60.18:0,60,845	1/1:0,5:5:15.05:186,15,0	1/1:0,11:11:33.02:389,33,0	1/1:1,25:26:78.20:950,78,0	0/0:10,0:10:30.10:0,30,432	0/0:9,0:9:27.09:0,27,389	0/0:22,0:22:66.20:0,66,916	0/0:11,0:11:33.11:0,33,475	0/0:17,0:17:45.13:0,45,616	1/1:0,24:24:69.22:855,69,0	0/0:15,0:15:45.12:0,45,625
chr10	106603299	.	T	TA	2128.84	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-2.276;DP=557;FS=10.037;HRun=11;HaplotypeScore=62.9805;InbreedingCoeff=0.9777;MQ=75.50;MQ0=0;MQRankSum=-0.126;QD=18.84;ReadPosRankSum=-4.093;VQSLOD=2.6952;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:45:99:0,115,874	1/1:0,4:4:12.02:122,12,0	0/0:14,0:13:11.26:0,11,125	0/0:18,0:17:18.13:0,18,101	0/0:16,0:17:43.60:0,44,317	0/0:21,0:21:26.15:0,26,347	0/0:20,1:22:25.36:0,25,364	1/1:6,16:23:27.84:439,28,0	1/1:0,0:12:22.87:122,23,0	0/0:16,0:17:37.36:0,37,268	0/0:11,0:11:24.68:0,25,215	0/0:24,0:24:40.12:0,40,381	0/0:16,0:16:41.83:0,42,325	0/0:17,0:17:41.81:0,42,325	0/0:20,0:20:44.79:0,45,348	0/0:21,0:21:59.76:0,60,464	0/0:27,0:27:68.69:0,69,534	0/0:25,0:26:61.75:0,62,465	1/1:3,14:17:39:375,39,0	1/1:3,13:16:21.74:370,22,0	1/1:5,14:19:21.89:403,22,0	0/0:17,0:17:38.83:0,39,302	0/0:19,0:19:32.80:0,33,250	0/0:44,0:44:99:0,116,879	0/0:20,0:20:44.73:0,45,342	0/0:20,0:21:46.13:0,46,331	1/1:1,21:22:30.88:495,31,0	0/0:5,0:5:11.95:0,12,93
chr10	106605366	.	AAAAC	A	4008.98	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.027;DP=479;FS=5.903;HRun=0;HaplotypeScore=71.5709;InbreedingCoeff=0.9852;MQ=57.04;MQ0=17;MQRankSum=-3.163;QD=31.57;ReadPosRankSum=0.383;VQSLOD=3.0984;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:60.18:0,60,1428	1/1:0,7:7:18.06:291,18,0	0/0:23,0:8:18.06:0,18,326	0/0:24,0:13:24.02:0,24,478	0/0:18,0:18:48.16:0,48,1148	0/0:10,0:10:27.09:0,27,637	0/0:13,0:13:36.12:0,36,818	1/1:9,20:27:60.16:948,60,0	1/1:5,13:17:30.10:507,30,0	0/0:19,0:19:48.16:0,48,1109	0/0:13,0:13:36.12:0,36,887	0/0:10,0:10:30.10:0,30,704	0/0:5,0:5:15.05:0,15,371	0/0:12,0:12:21.07:0,21,518	0/0:14,0:13:30.10:0,30,741	0/0:13,0:13:30.08:0,30,690	0/0:39,0:37:90.27:0,90,2087	0/0:19,0:19:57.01:0,57,1113	1/1:7,14:16:39.01:598,39,0	1/1:1,14:15:39.10:614,39,0	1/1:4,11:14:15.05:254,15,0	0/0:5,0:5:15.05:0,15,370	0/0:6,0:6:18.06:0,18,445	0/0:31,0:29:59.86:0,60,1344	0/0:15,0:15:42.14:0,42,1001	0/0:19,0:19:48.16:0,48,1055	1/1:6,16:19:48.16:797,48,0	0/0:15,0:15:45.15:0,45,1046
chr10	106606962	.	TC	T	436.02	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=8.017;DP=570;FS=3.582;HRun=1;HaplotypeScore=78.3882;InbreedingCoeff=0.5641;MQ=55.42;MQ0=13;MQRankSum=-8.260;QD=12.46;ReadPosRankSum=-3.098;VQSLOD=1.2399;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:39:99:0,107,920	0/0:12,0:12:33.80:0,34,235	0/0:6,0:3:5.94:0,6,42	0/1:13,0:9:9.64:10,0,70	0/0:24,0:23:21.20:0,21,425	0/0:15,0:15:32.95:0,33,380	0/0:30,0:30:75.41:0,75,670	0/0:26,2:28:35.35:0,35,506	1/1:5,16:21:59.96:528,60,0	0/0:19,0:18:45.62:0,46,420	0/0:13,1:14:22.94:0,23,221	0/0:22,0:22:52.71:0,53,468	0/0:16,0:15:7.73:0,8,209	0/0:11,0:11:9.02:0,9,90	0/0:19,0:18:46.51:0,47,446	0/0:18,0:18:38.89:0,39,346	0/0:31,0:30:75.10:0,75,673	0/0:22,0:21:26.15:0,26,440	0/0:16,0:14:39.43:0,39,301	0/0:22,0:22:25.55:0,26,275	0/0:16,0:16:33.94:0,34,238	0/0:14,0:14:28.15:0,28,278	0/0:21,0:21:34.04:0,34,364	0/0:31,0:28:52.15:0,52,504	0/0:19,0:18:47.34:0,47,422	0/0:29,1:29:68.01:0,68,622	0/0:20,0:20:32.88:0,33,281	0/0:17,0:17:23.49:0,23,296
chr10	106606968	.	TTTTTTTTTTTC	T	1211.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.799;DP=576;FS=0.000;HRun=0;HaplotypeScore=175.7318;InbreedingCoeff=0.8415;MQ=52.78;MQ0=18;MQRankSum=-5.731;QD=63.76;ReadPosRankSum=4.302;VQSLOD=3.2152;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:37:99:0,108,5154	0/0:14,0:14:42.14:0,42,1579	0/0:5,0:2:3.01:0,3,144	0/0:12,0:7:18.06:0,18,656	0/0:25,0:24:66.68:0,67,2728	0/0:19,0:18:51.16:0,51,2225	0/0:31,0:30:84.12:0,84,3624	0/0:23,0:23:66.20:0,66,2629	1/1:3,16:18:50.41:1306,50,0	0/0:21,0:20:56.78:0,57,2152	0/0:13,0:12:30.06:0,30,1148	0/0:26,0:25:72.25:0,72,2981	0/0:16,0:15:42.14:0,42,1611	0/0:11,0:11:21.07:0,21,721	0/0:20,0:19:57.20:0,57,2292	0/0:19,0:19:51.18:0,51,2447	0/0:29,0:28:74.93:0,75,3837	0/0:25,0:24:66.23:0,66,2921	0/0:17,0:15:45.15:0,45,1991	0/0:17,0:17:45.15:0,45,2057	0/0:16,0:16:36.12:0,36,1656	0/0:13,0:13:39.13:0,39,1698	0/0:19,0:19:51.62:0,52,2097	0/0:33,0:29:75.26:0,75,3309	0/0:17,0:16:48.16:0,48,2172	0/0:30,0:29:86.65:0,87,3366	0/0:23,0:23:51.17:0,51,1892	0/0:23,0:23:53.75:0,54,2336
chr10	106607331	.	T	TA	184.91	PASS	AB=0.933;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.600;DP=545;FS=0.968;HRun=12;HaplotypeScore=65.7127;InbreedingCoeff=0.6012;MQ=57.48;MQ0=4;MQRankSum=0.979;QD=4.02;ReadPosRankSum=-3.018;VQSLOD=0.1178;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:58.85:0,59,439	0/0:6,0:7:19.93:0,20,137	0/0:16,0:8:16.16:0,16,100	0/0:12,0:9:12.72:0,13,82	0/0:29,0:29:59.58:0,60,436	0/0:13,0:13:23.81:0,24,175	0/0:18,0:18:29.79:0,30,219	0/0:33,0:32:65.56:0,66,480	1/1:2,16:17:29.99:279,30,0	0/0:14,1:16:0.58:0,1,168	0/0:17,0:18:31.81:0,32,225	0/0:19,0:19:32.75:0,33,238	0/0:14,0:14:35.73:0,36,260	0/0:15,0:15:35.74:0,36,262	0/0:15,0:15:26.31:0,26,182	0/0:14,0:14:38.77:0,39,284	0/0:20,0:18:44.66:0,45,323	0/0:28,0:28:68.59:0,69,504	0/0:17,0:18:21.74:0,22,267	0/1:26,2:28:1.72:2,0,315	0/0:20,0:20:41.72:0,42,306	0/0:18,0:18:17.51:0,18,222	0/0:16,0:16:23.80:0,24,175	0/0:10,0:10:17.86:0,18,131	0/0:19,0:19:44.57:0,45,321	0/0:31,0:31:53.59:0,54,394	0/0:22,0:22:55.89:0,56,398	0/0:23,0:22:50.68:0,51,372
chr10	106608572	.	TAAC	T	1286.38	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.005;DP=681;FS=6.076;HRun=0;HaplotypeScore=100.3201;InbreedingCoeff=0.9692;MQ=74.15;MQ0=0;MQRankSum=-1.511;QD=42.88;ReadPosRankSum=1.956;VQSLOD=5.2503;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,2620	0/0:8,0:8:18.06:0,18,415	0/0:15,0:15:42.10:0,42,802	0/0:8,0:8:14.05:0,14,378	0/0:28,0:28:81.26:0,81,1822	0/0:16,0:16:48.16:0,48,1068	0/0:34,0:34:99:0,99,2283	0/0:26,0:26:75.23:0,75,1542	1/1:1,29:30:81.28:1381,81,0	0/0:24,0:24:66.23:0,66,1511	0/0:23,0:23:69.22:0,69,1544	0/0:30,0:30:87.30:0,87,1956	0/0:22,0:22:63.20:0,63,1409	0/0:32,0:32:90.27:0,90,1985	0/0:30,0:30:84.29:0,84,1936	0/0:32,0:32:96.33:0,96,2166	0/0:31,0:31:93.29:0,93,2070	0/0:21,0:21:63.22:0,63,1420	0/0:22,0:22:63.22:0,63,1433	0/0:16,0:16:45.15:0,45,1036	0/0:45,0:45:99:0,135,3082	0/0:23,0:23:60.21:0,60,1351	0/0:25,0:25:75.26:0,75,1681	0/0:17,0:17:51.16:0,51,1131	0/0:18,0:18:54.17:0,54,1189	0/0:27,0:27:81.28:0,81,1869	0/0:32,0:32:93.32:0,93,2144	0/0:7,0:7:21.07:0,21,484
chr10	106608659	.	A	AC	660.73	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.614;DP=712;FS=0.000;HRun=3;HaplotypeScore=78.1677;InbreedingCoeff=0.9978;MQ=77.63;MQ0=0;MQRankSum=-2.529;QD=33.04;ReadPosRankSum=2.375;VQSLOD=4.0099;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1282	0/0:8,0:8:24.07:0,24,288	0/0:30,0:29:74.01:0,74,844	0/0:29,0:29:84.25:0,84,998	0/0:31,0:31:87.27:0,87,1044	0/0:19,0:19:57.17:0,57,681	0/0:22,0:22:60.18:0,60,719	0/0:26,0:26:75.20:0,75,873	1/1:2,18:20:54.18:756,54,0	0/0:27,0:27:78.15:0,78,917	0/0:20,0:20:57.15:0,57,671	0/0:28,0:28:84.24:0,84,993	0/0:20,0:20:54.15:0,54,635	0/0:23,0:23:63.16:0,63,731	0/0:40,0:40:99:0,111,1332	0/0:19,0:19:54.15:0,54,627	0/0:40,0:40:99:0,120,1438	0/0:29,0:29:84.26:0,84,1007	0/0:15,0:15:39.11:0,39,459	0/0:21,0:21:57.17:0,57,683	0/0:52,0:52:99:0,153,1824	0/0:29,0:29:87.24:0,87,1019	0/0:21,0:21:57.17:0,57,684	0/0:17,0:17:48.15:0,48,575	0/0:24,0:24:66.20:0,66,792	0/0:27,0:27:78.24:0,78,936	0/0:26,0:26:72.21:0,72,853	0/0:12,0:12:36.07:0,36,416
chr10	106608752	.	CA	C	4136.22	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.891;DP=702;FS=4.094;HRun=8;HaplotypeScore=71.2962;InbreedingCoeff=0.9995;MQ=69.64;MQ0=1;MQRankSum=1.947;QD=23.24;ReadPosRankSum=1.270;VQSLOD=4.5134;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,135,1600	1/1:0,10:10:24.04:232,24,0	0/0:19,0:16:32.67:0,33,337	0/0:26,1:24:44.35:0,44,471	0/0:24,0:24:72.20:0,72,844	0/0:21,0:21:60.18:0,60,723	0/0:26,0:26:75.12:0,75,861	1/1:7,24:31:60.04:569,60,0	1/1:1,19:20:57.09:550,57,0	0/0:35,0:35:93.29:0,93,1120	0/0:18,0:18:48.13:0,48,567	0/0:21,0:21:54.15:0,54,638	0/0:14,0:14:42.10:0,42,475	0/0:20,0:20:57.17:0,57,685	0/0:39,0:39:99:0,105,1241	0/0:28,0:28:81.24:0,81,964	0/0:32,0:32:87.25:0,87,1035	0/0:22,0:22:57.10:0,57,652	1/1:2,20:22:60.06:565,60,0	1/1:2,30:32:90.09:859,90,0	1/1:2,27:29:72.12:695,72,0	0/0:29,0:29:74.81:0,75,893	0/0:26,0:26:69.20:0,69,818	0/0:18,0:18:51.14:0,51,603	0/0:18,0:18:51.16:0,51,615	0/0:25,0:25:66.19:0,66,787	1/1:2,32:34:68.98:666,69,0	0/0:13,0:13:30.09:0,30,361
chr10	106609205	.	TTC	T	3526.93	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=5.315;DP=492;FS=17.400;HRun=0;HaplotypeScore=73.0375;InbreedingCoeff=0.9738;MQ=68.88;MQ0=2;MQRankSum=0.314;QD=23.51;ReadPosRankSum=1.028;VQSLOD=2.9749;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:48.01:0,48,657	1/1:0,8:8:9.01:141,9,0	0/0:23,0:17:35.27:0,35,503	0/0:21,0:17:38.34:0,38,458	0/0:15,0:15:29.36:0,29,452	0/0:14,0:14:42.10:0,42,623	0/0:27,0:27:73.13:0,73,1179	1/1:1,21:22:59.66:562,60,0	1/1:0,0:25:45.08:443,45,0	0/0:13,0:13:36.05:0,36,491	0/0:14,0:14:8.83:0,9,312	0/0:13,0:13:32.82:0,33,415	0/0:12,0:12:36.04:0,36,521	0/0:15,0:14:38.88:0,39,560	0/0:24,0:24:72.14:0,72,1013	0/0:16,0:17:14.92:0,15,630	0/0:22,0:22:60.01:0,60,880	0/0:8,0:8:24.08:0,24,481	1/1:3,16:20:57:637,57,0	1/1:3,24:27:56.20:534,56,0	1/1:1,28:30:35.95:572,36,0	0/0:9,0:9:23.26:0,23,277	0/0:15,0:15:41.77:0,42,533	0/0:18,0:18:36.07:0,36,616	0/0:14,0:14:24.89:0,25,411	0/0:18,0:18:53.70:0,54,802	1/1:6,8:17:51.08:638,51,0	0/0:10,0:10:27.04:0,27,400
chr10	106610464	.	A	AAC	6530.71	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-10.864;DP=488;FS=2.295;HRun=0;HaplotypeScore=67.6868;InbreedingCoeff=0.9876;MQ=92.39;MQ0=3;MQRankSum=-1.158;QD=43.83;ReadPosRankSum=-0.042;VQSLOD=6.1399;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:63.18:0,63,881	1/1:0,8:9:27.09:490,27,0	0/0:21,0:21:49.37:0,49,698	0/0:22,0:22:60.13:0,60,817	0/0:10,0:10:27.05:0,27,348	0/0:16,0:16:27.07:0,27,364	0/0:22,0:22:60.19:0,60,841	1/1:5,18:23:60.19:1056,60,0	1/1:2,15:17:39.13:713,39,0	0/0:9,0:9:18.05:0,18,242	0/0:5,0:5:12.04:0,12,172	0/0:11,0:11:27.09:0,27,386	0/0:14,0:14:36.12:0,36,516	0/0:10,0:10:27.09:0,27,387	0/0:12,0:12:33.11:0,33,473	0/0:8,0:8:24.08:0,24,344	0/0:38,0:37:99:0,109,1548	0/0:28,0:28:84.28:0,84,1204	1/1:6,22:29:74.84:1303,75,0	1/1:4,11:14:27.09:494,27,0	1/1:3,25:27:63.22:1155,63,0	0/0:11,0:11:30.10:0,30,430	0/0:6,0:6:15.05:0,15,215	0/0:27,0:27:78.24:0,78,1098	0/0:10,0:10:21.07:0,21,300	0/0:22,0:22:54.11:0,54,702	1/1:0,27:27:72.25:1319,72,0	0/0:10,0:10:30.10:0,30,430
chr10	106610650	.	G	GA	1468.99	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-7.579;DP=388;FS=0.590;HRun=7;HaplotypeScore=37.0157;InbreedingCoeff=0.8685;MQ=60.17;MQ0=10;MQRankSum=-0.740;QD=18.59;ReadPosRankSum=-2.352;VQSLOD=2.3267;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:72.11:0,72,695	1/1:1,2:2:6.02:69,6,0	0/1:6,0:3:5.78:6,0,49	0/0:12,0:9:12.48:0,12,117	0/0:13,0:13:24.03:0,24,231	0/0:7,0:7:15.02:0,15,145	0/0:16,0:16:42.06:0,42,405	1/1:7,17:20:45.13:531,45,0	0/0:16,0:16:33.05:0,33,317	0/0:10,0:10:27.04:0,27,261	0/0:9,0:9:24.02:0,24,226	0/0:12,0:11:21.02:0,21,197	0/0:14,0:14:29.94:0,30,289	0/0:9,0:9:27.04:0,27,261	0/0:6,0:6:15.02:0,15,145	0/0:15,0:14:24.86:0,25,360	0/0:38,0:38:96.15:0,96,927	0/0:27,0:26:60.09:0,60,578	1/1:3,12:15:36.11:431,36,0	1/1:3,4:7:9.03:105,9,0	1/1:0,11:11:18.06:217,18,0	0/0:9,0:9:21.03:0,21,203	0/0:9,0:8:24.04:0,24,231	0/0:25,0:24:60.09:0,60,579	0/0:10,0:10:27.04:0,27,261	0/0:13,0:12:24.04:0,24,232	1/1:5,8:13:24.07:290,24,0	0/0:8,0:7:21.03:0,21,202
chr10	106611170	.	CAGAG	C	5189.90	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.009;DP=683;FS=1.285;HRun=0;HaplotypeScore=115.9644;InbreedingCoeff=0.9991;MQ=73.78;MQ0=0;MQRankSum=-6.498;QD=38.73;ReadPosRankSum=-1.419;VQSLOD=4.8039;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:51:99:0,138,3303	1/1:0,8:8:24.08:417,24,0	0/0:28,0:27:75.26:0,75,1791	0/0:33,0:32:63.21:0,63,1346	0/0:17,0:17:45.15:0,45,1113	0/0:23,0:23:60.21:0,60,1505	0/0:30,0:29:72.25:0,72,1829	1/1:12,26:38:78.24:1281,78,0	0/0:24,0:24:63.22:0,63,1151	0/0:24,0:24:63.21:0,63,1495	0/0:13,0:13:36.12:0,36,888	0/0:16,0:16:45.15:0,45,1105	0/0:17,0:17:48.16:0,48,1187	0/0:16,0:17:47.95:0,48,1154	0/0:21,0:21:54.19:0,54,1370	0/0:26,0:26:78.25:0,78,1818	0/0:37,0:39:99:0,102,2441	0/0:31,0:31:87.27:0,87,2087	1/1:0,12:12:36.11:596,36,0	1/1:2,23:25:57.20:991,57,0	1/1:7,22:29:33.23:915,33,0	0/0:26,0:26:66.21:0,66,1621	0/0:23,0:23:66.23:0,66,1634	0/0:29,0:29:75.26:0,75,1878	0/0:17,0:17:45.15:0,45,1107	0/0:34,0:34:93.32:0,93,2335	1/1:3,19:22:57.20:991,57,0	0/0:8,0:8:24.08:0,24,609
chr10	106611571	.	A	ACCCGACTC	9437.42	PASS	AB=0.800;AC=13;AF=0.232;AN=56;BaseQRankSum=-5.951;DP=579;FS=20.012;HRun=0;HaplotypeScore=139.1394;InbreedingCoeff=0.8931;MQ=79.06;MQ0=0;MQRankSum=-12.471;QD=86.58;ReadPosRankSum=-3.151;VQSLOD=3.3397;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,3423	0/1:3,1:4:75.93:163,0,76	0/0:24,0:24:69.24:0,69,1905	0/0:22,0:22:63.09:0,63,1672	0/0:23,0:23:63.22:0,63,1802	0/0:18,0:18:54.19:0,54,1568	0/0:26,0:26:75.26:0,75,2135	1/1:12,3:22:57.09:1631,57,0	1/1:4,15:22:51.18:2233,51,0	0/0:21,0:21:63.22:0,63,1772	0/0:22,0:22:63.22:0,63,1820	0/0:16,0:16:48.16:0,48,1393	0/0:21,0:21:54.19:0,54,1569	0/0:17,0:17:51.18:0,51,1476	0/0:31,0:31:84.27:0,84,2398	0/0:22,0:22:66.23:0,66,1929	0/0:36,0:36:99:0,105,3071	0/0:23,0:23:69.19:0,69,1894	1/1:8,11:18:48.16:1895,48,0	1/1:0,4:7:12.04:541,12,0	1/1:5,7:17:24.08:1082,24,0	0/0:18,0:18:54.17:0,54,1454	0/0:22,0:22:66.23:0,66,1903	0/0:17,0:17:48.12:0,48,1300	0/0:18,0:18:51.18:0,51,1493	0/0:16,0:16:45.15:0,45,1318	1/1:2,12:14:42.14:1892,42,0	0/0:13,0:13:39.07:0,39,1009
chr10	106611711	.	CT	C	149.29	PASS	AB=0.876;AC=4;AF=0.071;AN=56;BaseQRankSum=5.122;DP=536;FS=12.880;HRun=13;HaplotypeScore=57.6429;InbreedingCoeff=0.3915;MQ=67.41;MQ0=16;MQRankSum=-2.133;QD=3.55;ReadPosRankSum=2.063;VQSLOD=-0.5731;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:20:41.91:0,42,377	0/0:14,0:14:26.88:0,27,248	0/0:46,0:13:20.71:0,21,122	0/0:39,0:21:24.61:0,25,154	0/0:22,0:21:50.94:0,51,466	0/0:8,0:8:14.97:0,15,132	0/0:15,0:15:36.06:0,36,350	0/0:24,2:25:13.20:0,13,426	1/1:2,13:15:34.81:242,35,0	0/0:16,1:17:4.79:0,5,172	0/0:13,1:14:2.13:0,2,182	0/0:19,1:18:39.03:0,39,368	0/0:11,2:13:8.14:0,8,235	0/0:13,0:13:26.88:0,27,247	0/0:17,3:18:22.52:0,23,359	0/0:15,1:16:20.15:0,20,355	0/1:13,3:16:4.55:5,0,282	0/0:38,0:39:75.88:0,76,771	0/0:20,0:18:38.99:0,39,362	0/0:25,1:25:39.95:0,40,520	0/0:11,0:11:26.98:0,27,239	0/0:5,0:5:9:0,9,82	0/0:16,0:18:47.56:0,48,411	0/1:9,1:10:1.16:1,0,129	0/0:21,1:26:34.27:0,34,425	0/0:16,0:15:33.05:0,33,321	0/0:15,1:13:5.09:0,5,202	0/0:8,0:8:20.93:0,21,178
chr10	106613630	.	TCTCTACCGACCACGTGTTCACTG	T	5065.06	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.207;DP=567;FS=0.687;HRun=0;HaplotypeScore=325.9221;InbreedingCoeff=0.9221;MQ=83.53;MQ0=0;MQRankSum=-6.537;QD=65.78;ReadPosRankSum=0.846;VQSLOD=3.3829;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,9981	1/1:1,4:5:6.02:378,6,0	0/0:32,0:32:87.28:0,87,5488	0/0:25,0:25:57.12:0,57,3939	0/0:17,0:17:36.07:0,36,2789	0/0:23,0:23:66.21:0,66,5491	0/0:24,0:24:69.24:0,69,6328	1/1:9,3:12:9.03:471,9,0	0/0:30,0:30:87.28:0,87,8166	0/0:21,0:21:60.20:0,60,5363	0/0:12,0:12:27:0,27,2534	0/0:17,0:17:48.16:0,48,4936	0/0:13,0:13:36.12:0,36,3695	0/0:17,0:17:48.16:0,48,4894	0/0:34,0:34:99:0,99,9464	0/0:23,0:23:66.21:0,66,6012	0/0:44,0:44:99:0,120,11862	0/0:25,0:25:66.19:0,66,6534	1/1:8,7:15:21.01:826,21,0	1/1:3,6:9:14.95:604,15,0	1/1:12,6:18:2.90:145,3,0	0/0:9,0:9:27.09:0,27,2249	0/0:9,0:9:21.07:0,21,1589	0/0:22,0:22:63.22:0,63,6160	0/0:9,0:9:27.09:0,27,2361	0/0:35,0:35:99:0,102,9256	1/1:2,16:18:42.14:2641,42,0	0/0:13,0:13:39.11:0,39,3205
chr10	106614251	.	TG	T	792.47	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.917;DP=617;FS=8.240;HRun=2;HaplotypeScore=65.3478;InbreedingCoeff=0.9454;MQ=84.93;MQ0=1;MQRankSum=-2.333;QD=29.35;ReadPosRankSum=0.987;VQSLOD=2.4734;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1688	0/0:6,0:6:18.06:0,18,267	0/0:23,0:23:44.73:0,45,844	0/0:21,0:21:49.41:0,49,711	0/0:19,0:19:51.16:0,51,745	0/0:23,0:22:63.19:0,63,903	0/0:25,0:25:75.25:0,75,1122	0/0:26,0:26:75.23:0,75,1069	1/1:3,24:27:72.17:887,72,0	0/0:20,0:20:57.19:0,57,853	0/0:8,0:8:20.98:0,21,248	0/0:15,0:15:42.14:0,42,629	0/0:23,0:23:66.08:0,66,890	0/0:28,0:28:78.26:0,78,1168	0/0:21,0:21:63.19:0,63,906	0/0:16,1:17:12.19:0,12,657	0/0:44,0:44:99:0,123,1773	0/0:23,0:23:63.19:0,63,917	0/0:16,0:16:45.13:0,45,635	0/0:14,0:14:39.12:0,39,565	0/0:49,0:49:99:0,135,2002	0/0:19,0:19:48.16:0,48,719	0/0:17,0:17:51.16:0,51,740	0/0:34,0:34:99:0,102,1506	0/0:18,0:18:51.15:0,51,744	0/0:19,0:19:57.17:0,57,798	0/0:17,0:17:45.15:0,45,674	0/0:5,0:5:15.05:0,15,225
chr10	106614322	.	A	AAC	1528.66	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.606;DP=663;FS=0.661;HRun=0;HaplotypeScore=78.4007;InbreedingCoeff=0.9640;MQ=83.46;MQ0=0;MQRankSum=-1.124;QD=42.46;ReadPosRankSum=1.610;VQSLOD=5.3199;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,150,1994	0/0:9,0:9:24.08:0,24,324	0/0:28,0:28:81.25:0,81,1061	0/0:21,0:21:54.16:0,54,702	0/0:24,0:24:69.23:0,69,932	0/0:18,0:18:48.14:0,48,632	0/0:27,0:27:66.22:0,66,892	0/0:32,0:32:90.26:0,90,1151	1/1:6,30:36:96.31:1624,96,0	0/0:22,0:22:60.19:0,60,797	0/0:9,0:9:27.08:0,27,349	0/0:22,0:22:63.21:0,63,851	0/0:25,0:25:75.25:0,75,1014	0/0:30,0:30:78.26:0,78,1054	0/0:25,0:25:72.23:0,72,958	0/0:26,1:27:22.66:0,23,906	0/0:29,0:29:81.22:0,81,1060	0/0:19,0:19:51.15:0,51,670	0/0:18,0:18:54.16:0,54,699	0/0:4,0:4:12.04:0,12,162	0/0:45,0:45:99:0,120,1585	0/0:11,0:11:30.10:0,30,406	0/0:18,0:18:45.14:0,45,593	0/0:32,0:32:96.30:0,96,1281	0/0:12,0:12:33.11:0,33,446	0/0:31,0:31:83.87:0,84,1110	0/0:23,0:22:66.21:0,66,877	0/0:15,0:15:39.13:0,39,528
chr10	106615107	.	AGT	A	152.16	PASS	AB=0.898;AC=11;AF=0.275;AN=40;BaseQRankSum=3.915;DP=424;FS=3.000;HRun=0;HaplotypeScore=54.3695;InbreedingCoeff=-0.0416;MQ=74.40;MQ0=9;MQRankSum=-1.934;QD=0.98;ReadPosRankSum=2.043;VQSLOD=1.2254;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,1:28:68.21:68,0,70	./.	./.	./.	0/0:8,0:7:8.99:0,9,87	1/1:16,2:18:3:32,3,0	0/0:17,0:18:0.79:0,1,133	./.	0/0:7,0:14:2.86:0,3,26	0/0:8,0:8:0:0,0,0	0/0:10,0:10:6.01:0,6,69	./.	0/0:8,0:8:8.99:0,9,86	0/0:15,0:14:12.02:0,12,149	0/1:11,1:12:17.94:26,0,18	0/0:7,0:7:6.02:0,6,88	0/0:27,0:27:9.74:0,10,395	0/1:21,0:21:25.13:25,0,116	./.	0/1:8,0:12:2.24:10,0,2	./.	0/0:11,0:11:9.03:0,9,132	./.	0/1:26,3:28:60.04:60,0,109	0/1:8,1:9:19.97:20,0,81	0/1:14,0:13:11.99:17,0,12	1/1:6,0:7:2.80:13,3,0	0/0:5,0:5:8.96:0,9,86
chr10	106615574	.	TCTCACACACACACACA	T	529.81	PASS	AB=1.000;AC=10;AF=0.192;AN=52;BaseQRankSum=1.000;DP=437;FS=3.476;HRun=0;HaplotypeScore=165.2051;InbreedingCoeff=0.6416;MQ=45.43;MQ0=30;MQRankSum=0.569;QD=5.64;ReadPosRankSum=-0.926;VQSLOD=2.7784;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:30:61.98:0,62,2376	1/1:8,0:8:17.87:158,18,0	./.	./.	0/0:14,0:13:11.94:0,12,530	0/0:13,0:13:28.01:0,28,1094	0/0:33,0:31:42.34:0,42,1555	0/1:14,0:12:7.79:8,0,52	0/0:24,0:21:35.79:0,36,835	0/0:17,0:15:42.08:0,42,1438	0/0:17,0:15:18.05:0,18,662	0/0:7,0:6:6.96:0,7,281	0/0:15,0:15:33:0,33,716	0/0:13,0:13:28.41:0,28,941	0/0:16,0:13:12.50:0,12,465	0/0:14,0:13:18.01:0,18,912	0/0:19,0:19:27.50:0,27,1333	0/0:6,0:4:12.04:0,12,631	0/1:12,0:12:0.93:279,0,1	1/1:4,15:17:2.99:24,3,0	1/1:24,0:18:5.99:59,6,0	0/0:18,0:17:27.48:0,27,896	0/0:10,0:9:6:0,6,158	0/0:28,0:28:56.47:0,56,2114	0/0:13,0:13:22.01:0,22,1106	0/0:19,0:17:49.65:0,50,1549	1/1:0,17:17:2.78:142,3,0	0/0:14,0:12:32.85:0,33,1189
chr10	106616042	.	G	GT	2950.21	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.471;DP=637;FS=2.301;HRun=10;HaplotypeScore=70.1594;InbreedingCoeff=0.9733;MQ=62.07;MQ0=1;MQRankSum=-0.846;QD=17.67;ReadPosRankSum=-1.504;VQSLOD=3.8941;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:67.33:0,67,748	1/1:2,10:12:27.07:286,27,0	0/0:21,0:14:11.71:0,12,136	0/0:14,0:9:11.92:0,12,90	0/0:32,0:32:71.34:0,71,575	0/0:10,0:10:29.95:0,30,243	0/0:24,0:24:47.43:0,47,394	1/1:15,29:44:61.54:842,62,0	1/1:2,0:18:12.68:101,13,0	0/0:30,0:30:62.88:0,63,514	0/0:26,0:26:65.89:0,66,538	0/0:12,0:12:18.06:0,18,253	0/0:11,0:11:26.96:0,27,222	0/0:23,0:23:59.90:0,60,488	0/0:20,0:20:53.92:0,54,440	0/0:22,0:22:53.84:0,54,436	0/0:38,0:38:99:0,114,935	0/0:32,0:32:77.88:0,78,640	1/1:6,17:23:26.96:487,27,0	1/1:8,18:25:54.39:553,54,0	1/1:7,10:17:30.08:320,30,0	0/0:14,0:14:38.95:0,39,320	0/0:17,0:17:38.94:0,39,318	0/0:35,0:35:92.83:0,93,757	0/0:20,1:21:15.93:0,16,334	0/0:21,0:21:53.92:0,54,441	1/1:1,25:26:53.97:558,54,0	0/0:7,0:7:11.98:0,12,99
chr10	106616480	.	CAAAT	C	3406.76	PASS	AC=36;AF=0.947;AN=38;BaseQRankSum=-2.263;DP=299;FS=0.000;HRun=0;HaplotypeScore=49.2553;InbreedingCoeff=0.1463;MQ=55.10;MQ0=14;MQRankSum=2.063;QD=15.92;ReadPosRankSum=1.238;VQSLOD=2.8999;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,12:19:36.12:547,36,0	1/1:6,0:8:8.88:64,9,0	./.	./.	1/1:7,5:12:15.05:236,15,0	1/1:6,8:13:12.04:189,12,0	1/1:8,5:13:0.61:218,1,0	./.	./.	1/1:9,5:14:15.05:236,15,0	1/1:2,3:5:6.02:94,6,0	./.	1/1:4,4:8:9.03:141,9,0	./.	1/1:7,1:8:3.01:47,3,0	1/1:8,2:10:6.02:94,6,0	1/1:8,19:26:48.16:754,48,0	1/1:14,3:16:17.81:222,18,0	./.	0/0:10,0:12:1.32:0,1,4	1/1:6,0:3:3:28,3,0	./.	./.	1/1:6,3:7:6.02:94,6,0	1/1:5,5:10:9.03:141,9,0	1/1:5,2:7:6.02:94,6,0	1/1:9,0:16:12.01:112,12,0	1/1:3,5:8:6.02:94,6,0
chr10	106616874	.	ATTTGTTTG	A	2039.30	PASS	AB=0.686;AC=11;AF=0.196;AN=56;BaseQRankSum=8.746;DP=549;FS=4.356;HRun=0;HaplotypeScore=137.8896;InbreedingCoeff=0.8302;MQ=65.62;MQ0=1;MQRankSum=-3.992;QD=21.02;ReadPosRankSum=-0.192;VQSLOD=3.1724;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:54.16:0,54,1986	1/1:3,1:4:3.01:76,3,0	0/0:21,0:20:21.07:0,21,736	0/0:23,0:19:20.80:0,21,518	0/0:35,0:35:66.22:0,66,2628	0/0:18,0:19:42.12:0,42,1544	0/0:6,0:6:18.06:0,18,724	0/1:13,11:24:3.90:386,0,4	0/0:4,0:14:26.94:0,27,221	0/0:26,0:26:48.16:0,48,1843	0/0:19,0:19:33.03:0,33,1099	0/0:21,0:21:42.14:0,42,1695	0/0:17,0:17:48.16:0,48,1797	0/0:14,0:14:24.08:0,24,916	0/0:19,0:19:48.16:0,48,1915	0/0:9,0:9:15.05:0,15,619	0/0:30,0:30:70.92:0,71,2494	0/0:24,0:25:57.18:0,57,2003	1/1:9,7:16:17.98:367,18,0	1/1:8,13:21:29.98:594,30,0	1/1:8,1:9:3:76,3,0	0/0:19,0:19:45.15:0,45,1686	0/0:30,0:30:63.20:0,63,2388	0/0:19,0:21:51.05:0,51,1793	0/0:17,0:17:36.12:0,36,1404	0/0:20,0:20:42.14:0,42,1580	1/1:8,14:23:29.97:702,30,0	0/0:23,0:23:24.08:0,24,932
chr10	106617745	.	GCA	G	4348.93	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.271;DP=640;FS=9.277;HRun=0;HaplotypeScore=79.7335;InbreedingCoeff=0.8994;MQ=71.19;MQ0=1;MQRankSum=0.104;QD=26.20;ReadPosRankSum=1.202;VQSLOD=5.5491;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:50:99:0,120,1904	1/1:0,4:4:12.04:151,12,0	0/0:40,1:38:51.11:0,51,1102	0/0:21,1:18:1.28:0,1,473	0/0:18,0:18:45.11:0,45,692	0/0:16,1:17:1.29:0,1,534	0/0:31,0:31:69.20:0,69,1091	1/1:6,19:25:56.94:678,57,0	1/1:4,10:14:12.13:392,12,0	0/0:23,0:23:45.15:0,45,724	0/0:11,0:11:27.08:0,27,420	0/0:18,0:18:36.12:0,36,593	0/0:15,0:15:39.12:0,39,617	0/0:22,0:22:48.13:0,48,747	0/0:29,0:29:69.19:0,69,1071	0/0:15,0:14:42.12:0,42,671	0/0:23,1:24:11.32:0,11,799	0/0:21,0:21:51.16:0,51,821	1/1:5,14:19:42.13:530,42,0	1/1:5,11:16:30.10:378,30,0	1/1:13,54:68:99:1717,138,0	0/0:14,0:14:30.09:0,30,473	0/0:11,0:11:24.08:0,24,399	0/0:49,0:49:99:0,117,1912	0/0:13,0:13:33.07:0,33,474	0/0:21,1:22:13.37:0,13,717	1/1:5,15:20:41.92:503,42,0	0/0:7,0:7:21.07:0,21,349
chr10	106618036	.	A	ATTT	690.22	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.468;DP=435;FS=2.387;HRun=5;HaplotypeScore=64.4954;InbreedingCoeff=0.9630;MQ=78.11;MQ0=0;MQRankSum=-2.923;QD=57.52;ReadPosRankSum=-0.211;VQSLOD=3.1284;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.20:0,66,973	0/0:12,0:12:36.12:0,36,530	0/0:14,0:14:33.10:0,33,472	0/0:9,0:9:11.99:0,12,290	0/0:15,0:15:39.11:0,39,545	0/0:16,0:16:42.14:0,42,619	0/0:17,0:17:48.16:0,48,707	0/0:23,0:23:57.18:0,57,810	1/1:0,12:12:36.12:785,36,0	0/0:23,0:23:60.19:0,60,869	0/0:12,0:12:33.09:0,33,465	0/0:12,0:12:36.11:0,36,511	0/0:16,0:16:48.14:0,48,686	0/0:9,0:9:27.08:0,27,377	0/0:15,0:15:42.14:0,42,619	0/0:13,0:13:36.10:0,36,511	0/0:36,0:36:96.27:0,96,1372	0/0:12,0:12:33.11:0,33,480	0/0:15,0:15:42.13:0,42,600	0/0:15,0:15:22.38:0,22,535	0/0:20,0:20:57.19:0,57,840	0/0:9,0:9:27.09:0,27,398	0/0:12,0:12:33.11:0,33,486	0/0:17,0:17:48.16:0,48,708	0/0:14,0:14:39.13:0,39,573	0/0:12,0:12:30.09:0,30,442	0/0:15,0:15:39.13:0,39,574	0/0:14,0:14:36.12:0,36,530
chr10	106619736	.	T	TTGTGTG	2037.34	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=-1.245;DP=647;FS=0.000;HRun=0;HaplotypeScore=143.7413;InbreedingCoeff=0.7963;MQ=56.79;MQ0=16;MQRankSum=-5.273;QD=14.05;ReadPosRankSum=-2.547;VQSLOD=2.6611;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:15.05:0,15,300	1/1:12,0:13:6.01:63,6,0	./.	0/0:22,0:11:3.01:0,3,58	0/0:18,0:20:23.97:0,24,387	0/0:18,0:20:3.12:0,3,376	0/0:24,0:28:19.60:0,20,509	1/1:24,0:23:21.07:393,21,0	0/0:11,0:20:3.54:0,4,7	0/0:37,0:39:27.54:0,28,442	0/0:20,0:20:18.06:0,18,318	0/0:14,0:14:15.04:0,15,289	0/0:15,0:15:24.08:0,24,472	0/0:13,0:13:6.02:0,6,122	0/0:14,0:14:15.05:0,15,285	0/0:29,0:29:54.10:0,54,1016	0/0:25,0:28:42.13:0,42,797	0/0:24,0:25:43.02:0,43,758	1/1:18,4:21:24.08:466,24,0	1/1:15,7:23:9.03:290,9,0	1/1:27,0:22:18.04:352,18,0	0/0:24,0:27:1.86:0,2,318	0/0:25,0:24:30.10:0,30,590	0/0:19,0:24:51.17:0,51,931	0/0:20,0:23:12.92:0,13,226	0/0:33,0:33:30.04:0,30,480	1/1:17,13:31:25.33:646,25,0	0/0:18,0:18:15.01:0,15,253
chr10	106620013	.	GTTC	G	1790.26	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=4.569;DP=538;FS=0.519;HRun=0;HaplotypeScore=89.7573;InbreedingCoeff=0.8775;MQ=78.05;MQ0=2;MQRankSum=1.466;QD=13.46;ReadPosRankSum=-0.735;VQSLOD=3.1740;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:60.10:0,60,818	1/1:12,2:14:18.94:251,19,0	0/1:22,0:15:2.90:3,0,145	0/0:24,0:19:1.62:0,2,115	0/0:24,0:24:53.52:0,54,688	0/0:16,0:16:39.02:0,39,573	0/0:20,0:20:44.99:0,45,607	1/1:10,14:24:39.54:414,40,0	0/0:10,0:9:17.97:0,18,157	0/0:26,0:26:65.96:0,66,778	0/0:16,0:16:38.62:0,39,508	0/0:18,0:18:41.92:0,42,539	0/0:19,0:19:51.03:0,51,619	0/0:14,0:13:24.07:0,24,332	0/0:17,0:17:42.09:0,42,649	0/0:19,0:19:45.14:0,45,745	0/0:25,0:25:60.12:0,60,868	0/0:21,0:20:42.06:0,42,610	1/1:6,10:15:27.49:290,27,0	1/1:6,13:19:38.62:399,39,0	1/1:16,1:17:8.95:86,9,0	0/0:17,0:17:36.04:0,36,493	0/0:25,0:25:40.48:0,40,694	0/0:20,0:20:54.10:0,54,756	0/0:22,0:22:57.08:0,57,770	0/0:15,0:15:36.08:0,36,528	1/1:19,2:21:45.08:530,45,0	0/0:11,0:11:24:0,24,341
chr10	106620022	.	CTTCT	C	1036.15	PASS	AB=0.989;AC=11;AF=0.196;AN=56;BaseQRankSum=6.773;DP=578;FS=0.481;HRun=0;HaplotypeScore=107.8939;InbreedingCoeff=0.5425;MQ=69.64;MQ0=5;MQRankSum=1.595;QD=7.40;ReadPosRankSum=0.983;VQSLOD=2.1806;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:75.96:0,76,1102	1/1:6,7:13:4.93:168,5,0	0/1:29,0:12:3.38:3,0,161	0/0:25,0:16:1.76:0,2,128	0/0:30,0:30:59.49:0,59,912	0/0:17,0:17:41.87:0,42,715	0/0:19,0:19:52.17:0,52,771	1/1:20,0:20:22.59:286,23,0	0/0:10,0:10:18.95:0,19,247	0/0:28,0:28:72.10:0,72,951	0/0:21,0:19:45.66:0,46,644	0/0:20,0:20:44.18:0,44,742	0/0:21,0:20:57:0,57,796	0/0:13,0:12:27.08:0,27,448	0/0:16,0:16:42.10:0,42,803	0/0:18,0:18:50.98:0,51,957	0/0:27,0:27:52.68:0,53,1116	0/0:20,0:19:45.07:0,45,784	0/1:16,0:15:26.39:153,0,26	0/1:23,0:23:57.32:162,0,57	1/1:15,0:16:6.32:29,6,0	0/0:18,0:18:45.04:0,45,671	0/0:28,0:28:45.33:0,45,909	0/0:22,0:21:57.08:0,57,964	0/0:27,0:27:57.37:0,57,1019	0/0:17,0:17:29.38:0,29,644	1/1:21,1:22:3.27:383,3,0	0/0:9,0:9:27.01:0,27,446
chr10	106620023	.	TTC	T	1370.96	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=4.808;DP=574;FS=8.302;HRun=0;HaplotypeScore=85.7103;InbreedingCoeff=0.6694;MQ=67.30;MQ0=5;MQRankSum=0.235;QD=9.93;ReadPosRankSum=-2.402;VQSLOD=1.6110;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:17.86:0,18,614	1/1:12,1:13:12.12:179,12,0	0/0:28,0:9:0.59:0,1,129	0/0:25,0:16:0.97:0,1,103	0/0:28,0:28:46.91:0,47,547	0/0:17,0:17:18.04:0,18,421	0/0:18,0:18:49.78:0,50,510	1/1:21,0:21:40.63:356,41,0	0/0:10,0:10:5.89:0,6,63	0/0:28,0:28:68.81:0,69,713	0/0:20,0:18:36.19:0,36,424	0/0:20,0:20:50.70:0,51,495	0/0:22,0:21:34.98:0,35,493	0/0:14,0:13:8.05:0,8,263	0/0:16,0:16:40.98:0,41,525	0/0:18,0:18:21.63:0,22,564	0/0:27,0:27:46.52:0,47,668	0/0:20,0:19:27.55:0,28,474	1/1:16,0:15:8.86:216,9,0	0/1:22,0:22:10.96:311,0,11	1/1:3,12:15:7.26:76,7,0	0/0:16,0:16:44.75:0,45,459	0/1:28,0:28:3.13:3,0,514	0/0:23,0:22:38.60:0,39,606	0/0:27,0:27:50.21:0,50,662	0/0:17,0:17:38.53:0,39,437	1/1:23,0:23:17:394,17,0	0/0:9,0:9:23.90:0,24,276
chr10	106620024	.	TC	T	1279.44	PASS	AB=0.940;AC=14;AF=0.250;AN=56;BaseQRankSum=5.872;DP=601;FS=17.742;HRun=1;HaplotypeScore=85.8419;InbreedingCoeff=0.6524;MQ=66.87;MQ0=6;MQRankSum=-2.673;QD=8.76;ReadPosRankSum=-3.055;VQSLOD=-0.6878;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:8.25:0,8,469	1/1:13,0:13:22.71:162,23,0	0/0:25,3:9:1.04:0,1,117	0/0:27,0:17:0.95:0,1,103	0/0:26,1:27:21.84:0,22,396	0/0:17,0:17:32.72:0,33,344	0/0:19,0:19:46.80:0,47,408	1/1:20,0:20:47.49:371,47,0	1/1:10,0:10:9.57:34,10,0	0/0:27,0:27:66.59:0,67,609	0/0:19,1:18:30.72:0,31,330	0/0:21,0:21:39.02:0,39,389	0/0:25,0:24:29.43:0,29,375	0/0:17,0:16:7.77:0,8,181	0/0:19,0:19:21.86:0,22,394	0/0:21,1:22:38.62:0,39,444	0/0:30,1:31:41.81:0,42,503	0/0:22,0:21:26.02:0,26,364	1/1:16,0:15:11.69:240,12,0	0/1:20,2:22:26.01:252,0,26	1/1:15,0:15:4.41:50,4,0	0/0:15,0:15:44.32:0,44,382	0/1:26,1:27:5.58:6,0,369	0/0:26,0:25:30.11:0,30,434	0/0:28,0:28:19.75:0,20,492	0/0:16,0:16:32.85:0,33,328	1/1:20,3:23:6.62:338,7,0	0/0:11,0:11:7.38:0,7,198
chr10	106621237	.	G	GT	134.67	PASS	AB=0.918;AC=16;AF=0.296;AN=54;BaseQRankSum=8.919;DP=360;FS=0.000;HRun=0;HaplotypeScore=84.5617;InbreedingCoeff=-0.0864;MQ=35.20;MQ0=33;MQRankSum=-5.745;QD=0.89;ReadPosRankSum=0.102;VQSLOD=1.6065;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:9:1.33:1,0,100	0/1:8,0:8:19.77:20,0,30	0/0:11,0:3:2.17:0,2,28	0/0:26,0:7:8.76:0,9,83	0/0:11,0:12:4.29:0,4,63	0/1:10,0:14:28.13:34,0,28	0/1:8,0:8:0.60:1,0,153	0/0:23,0:20:57.19:0,57,784	0/0:10,1:11:1.10:0,1,139	0/1:22,1:22:92.79:93,0,399	1/1:8,0:7:3.36:8,3,0	0/0:11,0:10:10.08:0,10,190	1/1:4,0:2:0.47:1,0,0	1/1:5,0:5:2.97:11,3,0	0/0:16,1:15:13.01:0,13,341	0/1:8,0:9:12.78:13,0,32	0/1:6,1:7:1.33:1,0,187	0/0:4,0:3:7.57:0,8,75	0/0:20,0:16:42.14:0,42,561	0/0:15,0:15:5.31:0,5,118	./.	0/1:17,0:16:29.16:31,0,29	0/0:12,1:13:13.65:0,14,172	0/0:10,0:7:3.01:0,3,42	0/1:10,3:12:25.14:25,0,69	0/1:21,2:21:26.81:27,0,459	0/0:17,0:16:18.93:0,19,361	0/0:14,0:8:9.02:0,9,108
chr10	106621239	.	G	GT	80.31	PASS	AB=0.785;AC=13;AF=0.241;AN=54;BaseQRankSum=8.323;DP=364;FS=1.666;HRun=0;HaplotypeScore=87.0079;InbreedingCoeff=0.0085;MQ=34.91;MQ0=36;MQRankSum=-4.658;QD=0.71;ReadPosRankSum=-1.925;VQSLOD=1.5793;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,1:9:1.26:0,1,135	0/1:3,5:8:29.47:29,0,30	0/0:9,0:2:2.03:0,2,12	0/0:24,0:7:10.77:0,11,104	0/0:9,4:12:1.05:0,1,75	0/1:13,2:14:27.54:43,0,28	0/1:7,1:8:0.24:0,0,153	0/0:23,0:20:57.19:0,57,784	0/0:11,0:11:12.91:0,13,152	0/1:18,6:23:43.70:44,0,407	1/1:3,5:7:3.36:8,3,0	0/0:10,1:10:7.34:0,7,186	1/1:3,1:2:1.55:4,2,0	1/1:3,2:5:3.22:14,3,0	0/0:16,1:15:27.24:0,27,379	0/1:7,3:10:21.44:21,0,31	0/0:7,0:7:7.98:0,8,175	0/0:5,0:4:6.49:0,6,74	0/0:21,0:16:42.14:0,42,567	0/0:13,3:15:2.77:0,3,115	./.	0/1:10,9:18:37.21:37,0,64	0/0:11,2:13:15.70:0,16,210	0/0:9,1:7:3.01:0,3,42	0/1:10,2:11:9.26:9,0,116	0/0:22,2:21:8.65:0,9,506	0/0:15,2:16:16.09:0,16,359	0/0:14,1:9:8.56:0,9,124
chr10	106621245	.	G	GGT	328.26	PASS	AB=0.962;AC=22;AF=0.407;AN=54;BaseQRankSum=9.419;DP=385;FS=0.000;HRun=0;HaplotypeScore=117.4850;InbreedingCoeff=-0.1484;MQ=38.70;MQ0=34;MQRankSum=-6.642;QD=1.42;ReadPosRankSum=-5.758;VQSLOD=0.2464;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:7.26:7,0,228	0/1:8,0:8:9.68:10,0,39	1/1:11,0:4:5.25:18,5,0	0/0:25,0:10:8.29:0,8,158	0/1:13,0:12:2.06:2,0,107	0/1:16,0:15:7.45:7,0,49	0/0:8,0:8:11.79:0,12,198	0/0:24,0:21:59.36:0,59,695	0/1:11,1:12:26.04:26,0,189	0/1:25,1:25:99:154,0,461	1/1:8,0:7:6.11:31,6,0	0/0:13,0:12:3.25:0,3,191	1/1:5,0:3:2.80:13,3,0	1/1:5,0:5:1.88:7,2,0	0/1:19,1:18:19.61:20,0,486	0/1:11,0:11:4.24:4,0,71	0/1:7,1:8:32.97:33,0,178	0/1:6,0:4:0.68:1,0,86	0/0:22,0:17:45.14:0,45,603	0/0:16,0:15:7.89:0,8,113	./.	0/1:19,0:18:24.31:24,0,131	0/0:13,1:14:13.01:0,13,220	0/0:11,0:8:6.01:0,6,84	0/1:8,3:10:65.56:66,0,119	0/1:24,1:22:39.75:40,0,526	0/0:17,0:16:31.77:0,32,346	0/1:16,0:11:15.63:16,0,198
chr10	106621317	.	CAGAG	C	2608.49	PASS	AB=0.867;AC=13;AF=0.232;AN=56;BaseQRankSum=7.412;DP=561;FS=0.559;HRun=0;HaplotypeScore=106.3095;InbreedingCoeff=0.7132;MQ=79.85;MQ0=12;MQRankSum=-1.245;QD=9.03;ReadPosRankSum=0.939;VQSLOD=2.6170;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:45.10:0,45,948	0/1:1,2:3:3.94:46,0,4	0/1:78,0:37:8.33:8,0,721	0/1:115,0:46:11.57:12,0,595	0/0:12,0:12:24.08:0,24,580	0/0:17,0:17:36.10:0,36,806	0/0:15,0:15:39.09:0,39,765	1/1:7,12:19:33.07:502,33,0	0/0:9,0:9:15.05:0,15,380	0/0:17,0:19:44.58:0,45,735	0/0:5,0:4:6.02:0,6,152	0/0:12,0:12:33.06:0,33,649	0/0:9,0:9:27.09:0,27,657	0/0:5,0:5:12.04:0,12,285	0/0:22,0:22:42.09:0,42,895	0/0:11,0:11:30.10:0,30,714	0/0:15,0:15:36.08:0,36,808	0/0:14,0:14:39.11:0,39,892	1/1:2,17:19:45:629,45,0	1/1:1,9:10:15.05:260,15,0	1/1:1,22:23:42.12:706,42,0	0/0:11,0:11:18:0,18,251	0/0:11,0:12:21.06:0,21,428	0/0:23,0:23:57.18:0,57,1382	0/0:6,0:6:12.04:0,12,279	0/0:23,0:23:60.16:0,60,1354	1/1:4,18:22:35.87:625,36,0	0/0:13,0:13:39.13:0,39,939
chr10	106621534	.	GCACA	G	1340.85	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=7.947;DP=576;FS=1.486;HRun=0;HaplotypeScore=107.5670;InbreedingCoeff=0.2147;MQ=62.09;MQ0=1;MQRankSum=1.174;QD=8.71;ReadPosRankSum=-6.498;VQSLOD=0.2474;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:86.15:0,86,2291	0/1:7,0:7:37.78:38,0,124	0/0:10,0:4:8.96:0,9,74	0/1:9,0:5:1.95:2,0,22	0/0:17,0:17:42.13:0,42,1071	0/0:18,0:18:51.11:0,51,1150	0/0:45,0:45:99:0,132,2393	1/1:11,0:11:23.01:235,23,0	1/1:0,9:9:12.04:235,12,0	0/0:18,0:18:54.10:0,54,1163	0/1:8,0:8:2.81:3,0,416	0/0:24,0:24:48.27:0,48,1364	0/0:19,0:19:57.10:0,57,1183	0/0:20,0:20:60.13:0,60,1254	0/0:16,0:16:45.14:0,45,1096	0/0:10,0:10:30.08:0,30,709	0/0:44,0:44:99:0,132,2745	0/0:31,0:31:93.18:0,93,1938	0/1:17,0:17:99:190,0,122	0/1:11,0:11:27.17:79,0,27	0/1:53,0:53:99:459,0,633	0/0:13,0:13:3.23:0,3,628	0/0:7,0:7:18.06:0,18,495	0/0:35,0:35:81.12:0,81,1707	0/0:11,0:11:27.08:0,27,675	0/0:26,0:26:74.83:0,75,1756	0/1:29,0:29:99:250,0,382	0/0:18,0:18:51.14:0,51,1146
chr10	106621536	.	ACACG	A	154.39	PASS	AB=0.954;AC=9;AF=0.161;AN=56;BaseQRankSum=5.511;DP=579;FS=0.794;HRun=0;HaplotypeScore=112.8060;InbreedingCoeff=0.2265;MQ=61.08;MQ0=2;MQRankSum=-1.166;QD=1.88;ReadPosRankSum=-4.347;VQSLOD=0.7931;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,2:41:32.47:0,32,1806	0/1:7,0:7:4.88:5,0,206	0/0:10,0:4:3:0,3,25	0/0:9,0:5:0:0,0,0	0/0:16,0:16:39.13:0,39,931	0/0:18,0:18:39.12:0,39,889	0/0:47,0:47:84.24:0,84,1828	1/1:11,0:11:3.33:41,3,0	1/1:9,0:9:12.04:167,12,0	0/0:18,0:18:42.14:0,42,959	0/1:7,1:8:30.73:31,0,345	0/1:23,1:24:3.64:4,0,962	0/0:20,0:20:2.03:0,2,914	0/0:20,0:20:45.15:0,45,1027	0/0:16,0:16:42.14:0,42,985	0/0:10,0:10:24.08:0,24,554	0/0:44,0:44:87.30:0,87,2101	0/0:31,0:31:66.22:0,66,1542	0/0:18,0:17:6.11:0,6,301	0/1:11,0:11:12.09:12,0,56	0/0:53,0:53:4.79:0,5,1270	0/1:11,1:12:24.70:25,0,484	0/0:7,0:7:18.06:0,18,420	0/0:34,0:34:57.20:0,57,1361	0/0:11,0:11:24.08:0,24,556	0/0:26,1:27:48.41:0,48,1466	0/0:28,0:28:3.67:0,4,678	0/0:19,0:19:48.15:0,48,998
chr10	106622700	.	T	TC	4460.39	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.205;DP=695;FS=2.266;HRun=0;HaplotypeScore=104.0954;InbreedingCoeff=0.9994;MQ=72.58;MQ0=1;MQRankSum=-13.128;QD=36.86;ReadPosRankSum=-1.820;VQSLOD=4.0679;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,2054	1/1:0,15:15:36.12:521,36,0	0/0:33,0:31:32.63:0,33,942	0/0:27,0:27:38.72:0,39,821	0/0:27,0:27:78.26:0,78,1090	0/0:22,0:22:66.22:0,66,922	0/0:26,0:26:78.22:0,78,1052	1/1:0,21:21:60.20:880,60,0	0/0:26,0:26:78.26:0,78,1091	0/0:33,0:33:99:0,99,1367	0/0:27,0:27:78.24:0,78,1070	0/0:22,0:22:66.21:0,66,905	0/0:22,0:22:63.19:0,63,863	0/0:24,0:24:72.23:0,72,986	0/0:32,0:32:96.29:0,96,1307	0/0:25,0:25:75.25:0,75,1049	0/0:31,0:31:90.30:0,90,1250	0/0:30,0:30:87.12:0,87,1181	1/1:0,24:24:69.23:1030,69,0	1/1:0,19:19:48.16:713,48,0	1/1:0,21:21:30.09:432,30,0	0/0:21,0:21:63.21:0,63,879	0/0:17,0:17:51.16:0,51,697	0/0:21,0:20:60.20:0,60,838	0/0:24,0:24:72.24:0,72,1006	0/0:26,0:26:75.24:0,75,1027	1/1:0,21:21:60.20:885,60,0	0/0:8,0:8:24.08:0,24,335
chr10	106622704	.	G	GTTT	3995.81	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.732;DP=650;FS=0.946;HRun=0;HaplotypeScore=121.8439;InbreedingCoeff=0.9988;MQ=72.74;MQ0=1;MQRankSum=-13.868;QD=49.33;ReadPosRankSum=0.514;VQSLOD=5.3873;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,148,2721	1/1:0,8:8:24.08:436,24,0	0/0:32,0:30:84.18:0,84,1490	0/0:29,0:29:81.07:0,81,1454	0/0:26,0:26:78.27:0,78,1451	0/0:22,0:22:66.19:0,66,1159	0/0:25,0:25:75.24:0,75,1360	1/1:1,10:11:27.09:513,27,0	0/0:26,0:26:78.27:0,78,1454	0/0:34,0:34:99:0,99,1818	0/0:26,0:26:75.26:0,75,1388	0/0:24,0:24:66.23:0,66,1220	0/0:22,0:22:63.22:0,63,1160	0/0:23,0:23:69.24:0,69,1280	0/0:30,0:30:90.31:0,90,1671	0/0:26,0:26:78.25:0,78,1422	0/0:29,0:29:87.27:0,87,1588	0/0:29,0:29:78.24:0,78,1411	1/1:0,16:16:45.15:835,45,0	1/1:1,15:16:45.15:785,45,0	1/1:2,10:12:27.09:468,27,0	0/0:18,0:18:54.17:0,54,976	0/0:18,0:18:51.15:0,51,911	0/0:22,0:21:60.15:0,60,1022	0/0:24,0:24:72.25:0,72,1335	0/0:27,0:27:75.25:0,75,1365	1/1:0,18:18:54.18:959,54,0	0/0:8,0:8:24.08:0,24,447
chr10	106622705	.	A	AC	1794.94	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.865;DP=646;FS=1.481;HRun=0;HaplotypeScore=102.0993;InbreedingCoeff=0.9987;MQ=73.48;MQ0=1;MQRankSum=-13.729;QD=21.63;ReadPosRankSum=0.192;VQSLOD=5.1337;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,2016	1/1:0,8:8:24.02:219,24,0	0/0:32,0:30:90.09:0,90,1127	0/0:29,0:29:78.19:0,78,1038	0/0:27,0:27:78.25:0,78,1075	0/0:21,0:21:63.18:0,63,846	0/0:25,0:25:75.23:0,75,1015	1/1:1,10:11:27.03:253,27,0	0/0:26,0:26:78.26:0,78,1089	0/0:34,0:34:99:0,99,1323	0/0:26,0:26:75.23:0,75,1029	0/0:23,0:23:69.20:0,69,922	0/0:22,0:22:66.17:0,66,882	0/0:24,0:24:69.23:0,69,965	0/0:30,0:30:90.29:0,90,1241	0/0:26,0:26:78.25:0,78,1074	0/0:28,0:28:84.26:0,84,1157	0/0:28,0:28:78.18:0,78,1028	1/1:2,16:18:44.91:406,45,0	1/1:1,15:16:47.94:406,48,0	1/1:1,10:11:26.22:220,26,0	0/0:17,0:17:51.17:0,51,711	0/0:17,0:17:51.16:0,51,696	0/0:20,0:19:57.13:0,57,757	0/0:24,0:24:72.24:0,72,1001	0/0:26,0:26:78.24:0,78,1057	1/1:1,18:19:54:479,54,0	0/0:8,0:8:24.08:0,24,335
chr10	106623322	.	T	TGTCCCA	3601.92	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=-5.568;DP=342;FS=42.896;HRun=0;HaplotypeScore=75.3749;InbreedingCoeff=0.9514;MQ=100.09;MQ0=0;MQRankSum=-7.931;QD=97.35;ReadPosRankSum=0.017;VQSLOD=2.1923;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.23:0,75,1759	1/1:0,4:5:12.04:446,12,0	0/0:19,0:19:54.18:0,54,1198	0/0:28,0:28:65.96:0,66,1445	0/0:12,0:12:33.10:0,33,789	0/0:10,0:10:30.10:0,30,734	0/0:23,0:23:66.21:0,66,1548	1/1:4,4:12:33.11:1018,33,0	0/0:5,0:5:15.05:0,15,384	0/0:13,0:13:36.12:0,36,922	0/0:3,0:3:9.03:0,9,231	0/0:11,0:11:33.10:0,33,794	0/0:10,0:10:30.10:0,30,741	0/0:7,0:7:18.06:0,18,461	0/0:13,0:13:39.13:0,39,1000	0/0:3,0:3:9.03:0,9,204	0/0:22,0:22:63.15:0,63,1494	0/0:18,0:18:51.18:0,51,1307	1/1:1,4:5:15.05:562,15,0	./.	1/1:1,7:9:24.08:900,24,0	0/0:12,0:12:36.12:0,36,922	0/0:8,0:8:24.08:0,24,615	0/0:27,0:27:81.28:0,81,2032	0/0:10,0:10:27.09:0,27,671	0/0:14,0:14:42.13:0,42,955	1/1:0,6:6:18.06:675,18,0	0/0:6,0:6:18.06:0,18,425
chr10	106624914	.	CA	C	400.04	PASS	AB=0.810;AC=6;AF=0.107;AN=56;BaseQRankSum=1.004;DP=584;FS=5.339;HRun=15;HaplotypeScore=65.6014;InbreedingCoeff=0.2131;MQ=60.78;MQ0=9;MQRankSum=2.153;QD=3.70;ReadPosRankSum=3.162;VQSLOD=0.4405;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,2:47:14.86:0,15,455	0/0:1,0:4:8.68:0,9,55	0/1:22,0:8:7.82:8,0,33	0/0:27,0:9:4.25:0,4,57	0/0:22,0:22:3.84:0,4,264	1/1:6,15:22:20.86:260,21,0	0/1:15,8:27:32.64:165,0,33	0/0:16,0:24:37.29:0,37,211	0/1:8,8:18:4.51:82,0,5	0/0:14,2:16:11.70:0,12,197	0/0:19,1:22:7.57:0,8,177	0/0:15,0:15:16.82:0,17,168	0/0:10,0:10:8.94:0,9,71	0/0:15,0:11:5.99:0,6,50	0/0:16,0:21:38.61:0,39,299	0/0:13,0:12:20.80:0,21,163	0/0:48,1:48:63.03:0,63,727	0/0:27,0:23:32.38:0,32,245	0/0:9,1:12:17.25:0,17,119	0/0:5,0:18:28.75:0,29,157	0/0:6,0:17:19.30:0,19,106	0/1:16,2:18:7.85:8,0,157	0/0:17,3:22:1.62:0,2,201	0/0:27,0:26:46.21:0,46,391	0/0:10,1:11:14.93:0,15,121	0/0:16,0:16:29.79:0,30,243	0/0:23,0:22:27.50:0,27,157	0/0:9,0:8:11.80:0,12,93
chr10	106625311	.	TA	T	2256.32	PASS	AB=0.947;AC=13;AF=0.232;AN=56;BaseQRankSum=8.971;DP=496;FS=3.099;HRun=10;HaplotypeScore=61.0833;InbreedingCoeff=0.8839;MQ=70.69;MQ0=1;MQRankSum=-1.408;QD=16.12;ReadPosRankSum=-1.138;VQSLOD=3.7941;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.17:0,69,749	1/1:0,11:11:29.98:256,30,0	0/1:17,1:18:12.74:13,0,201	0/0:7,0:5:12.03:0,12,133	0/0:23,0:23:57.08:0,57,595	0/0:10,0:10:24.06:0,24,266	0/0:17,1:18:16.06:0,16,405	1/1:5,23:28:68.92:589,69,0	0/0:14,0:14:27.04:0,27,286	0/0:17,0:17:36.06:0,36,380	0/0:18,0:18:42.11:0,42,465	0/0:17,0:17:42.05:0,42,428	0/0:12,0:12:27.07:0,27,299	0/0:15,0:16:32.88:0,33,333	0/0:13,1:14:10.04:0,10,339	0/0:10,0:10:30.04:0,30,312	0/0:32,0:31:59.44:0,59,825	0/0:18,0:18:45.12:0,45,498	1/1:7,14:21:41.97:365,42,0	1/1:3,19:22:53.97:469,54,0	1/1:8,9:17:26.97:234,27,0	0/0:10,0:10:24.06:0,24,258	0/0:17,0:17:41.97:0,42,418	0/0:12,0:12:24.02:0,24,238	0/0:22,0:21:54.15:0,54,597	0/0:17,1:18:22.06:0,22,462	1/1:0,23:23:59.98:521,60,0	0/0:22,2:24:17.13:0,17,645
chr10	106625340	.	CT	C	141.61	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.977;DP=485;FS=2.497;HRun=3;HaplotypeScore=69.2377;InbreedingCoeff=0.8040;MQ=69.84;MQ0=5;MQRankSum=-0.404;QD=9.44;ReadPosRankSum=0.446;VQSLOD=0.9990;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:45.50:0,46,470	0/0:11,0:11:29.25:0,29,249	0/0:29,0:15:19.56:0,20,239	0/0:12,1:9:2.74:0,3,79	0/0:19,0:19:47.07:0,47,497	0/0:12,0:12:29.78:0,30,303	0/0:12,0:12:35.19:0,35,364	0/0:23,0:23:54.31:0,54,375	1/1:3,12:15:23.93:235,24,0	0/0:19,0:18:46.88:0,47,459	0/0:19,0:18:44.05:0,44,410	0/0:12,0:12:27.01:0,27,299	0/0:9,0:9:26.99:0,27,231	0/0:14,0:13:31.22:0,31,288	0/0:13,0:13:29.34:0,29,249	0/0:17,0:17:45.09:0,45,535	0/0:29,0:28:68.01:0,68,682	0/0:19,0:19:55.08:0,55,610	0/0:15,0:15:24:0,24,205	0/0:17,0:17:37.99:0,38,287	0/0:9,0:9:20.19:0,20,164	0/0:14,0:14:35.36:0,35,349	0/0:14,0:14:10.94:0,11,315	0/0:17,0:17:44.83:0,45,492	0/0:19,0:19:56.06:0,56,594	0/0:23,0:23:57.63:0,58,602	0/0:25,0:25:58.65:0,59,378	0/0:24,0:24:71.18:0,71,753
chr10	106625488	.	AACACACACACACAC	A	872.95	PASS	AC=10;AF=0.200;AN=50;BaseQRankSum=5.722;DP=506;FS=8.018;HRun=0;HaplotypeScore=174.2526;InbreedingCoeff=0.7849;MQ=69.91;MQ0=12;MQRankSum=-2.348;QD=10.39;ReadPosRankSum=-0.571;VQSLOD=2.0925;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:33:24.08:0,24,1057	1/1:1,3:5:12.04:340,12,0	./.	./.	0/0:18,0:20:27.09:0,27,1448	0/0:17,0:17:33.11:0,33,1859	0/0:19,0:27:24.34:0,24,1214	./.	0/0:14,0:14:15.05:0,15,721	0/0:16,0:17:42.14:0,42,2065	0/0:11,0:11:21.07:0,21,1052	0/0:8,0:8:9.03:0,9,519	0/0:9,0:11:15.05:0,15,880	0/0:8,0:8:15.05:0,15,549	0/0:19,0:19:33.11:0,33,1969	0/0:9,0:9:18.06:0,18,1145	0/0:30,0:32:40.02:0,40,1732	0/0:16,0:20:31.92:0,32,1155	1/1:12,2:13:3.58:125,4,0	1/1:10,5:17:14.99:378,15,0	1/1:22,9:31:3.01:57,3,0	0/0:14,0:15:18.06:0,18,995	0/0:14,0:14:12.04:0,12,591	0/0:24,0:26:35.82:0,36,2128	0/0:9,0:11:9.03:0,9,338	0/0:16,0:17:30.10:0,30,1457	1/1:9,7:16:0.77:113,1,0	0/0:8,0:8:18.06:0,18,1034
chr10	106627424	.	CAGAGAGAG	C	110.40	PASS	AB=0.942;AC=8;AF=0.190;AN=42;BaseQRankSum=2.824;DP=513;FS=29.038;HRun=0;HaplotypeScore=105.8651;InbreedingCoeff=0.1269;MQ=48.92;MQ0=50;MQRankSum=-0.613;QD=1.13;ReadPosRankSum=-1.927;VQSLOD=0.2414;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:9.03:0,9,169	./.	./.	./.	0/0:20,0:19:3.01:0,3,46	0/1:19,3:20:34.71:67,0,35	0/1:23,0:21:17.89:18,0,29	./.	1/1:9,0:11:3.01:56,3,0	0/0:22,0:22:7.21:0,7,264	0/0:16,0:16:3.01:0,3,42	0/0:16,0:15:9.01:0,9,119	0/0:7,0:7:2.99:0,3,24	0/0:12,0:12:4.26:0,4,49	./.	0/0:11,0:10:0:0,0,0	0/0:18,0:17:17.98:0,18,175	0/1:14,2:15:19.30:68,0,19	./.	1/1:15,0:16:0.34:0,0,0	0/0:22,0:18:0:0,0,0	0/0:20,0:19:9.03:0,9,125	0/0:14,0:13:3.01:0,3,49	0/0:26,0:24:15.04:0,15,192	0/0:16,0:16:3:0,3,25	0/0:19,0:17:12.87:0,13,140	0/1:10,0:10:0:0,0,0	./.
chr10	106627634	.	GGA	G	249.98	PASS	AB=0.894;AC=17;AF=0.327;AN=52;BaseQRankSum=0.980;DP=343;FS=16.785;HRun=0;HaplotypeScore=62.0954;InbreedingCoeff=-0.0840;MQ=37.29;MQ0=41;MQRankSum=-2.324;QD=1.47;ReadPosRankSum=-1.618;VQSLOD=-0.5981;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,6:15:11.81:12,0,35	0/1:7,0:6:14.77:25,0,15	./.	./.	1/1:10,0:9:2.17:41,2,0	0/0:10,0:8:13.38:0,13,122	0/0:14,1:10:18.15:0,18,159	0/0:18,0:17:20.43:0,20,154	0/1:4,5:10:29.44:48,0,29	0/0:14,0:11:22.42:0,22,255	0/0:12,0:13:2.44:0,2,78	0/1:12,0:10:8.25:12,0,8	0/1:9,0:8:30.52:31,0,81	0/0:8,0:7:11.87:0,12,167	1/1:10,9:15:5.13:20,5,0	0/0:15,0:13:18.57:0,19,196	0/1:7,3:9:47.41:47,0,95	0/1:14,0:14:43.33:43,0,132	0/1:13,0:12:2.22:2,0,99	0/0:12,0:9:10.66:0,11,88	1/1:11,1:6:1.96:24,2,0	0/0:11,0:12:3.43:0,3,20	0/0:10,0:9:11.44:0,11,92	0/0:26,0:20:19.66:0,20,193	0/0:8,0:8:2.84:0,3,12	0/1:3,0:5:2.10:2,0,52	0/1:14,0:12:59.56:60,0,87	0/1:10,0:5:27.61:28,0,58
chr10	106627697	.	AGATGAT	A	4911.27	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.438;DP=581;FS=1.774;HRun=0;HaplotypeScore=115.1633;InbreedingCoeff=0.9578;MQ=62.99;MQ0=19;MQRankSum=0.080;QD=37.49;ReadPosRankSum=-4.621;VQSLOD=3.5029;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:54.11:0,54,695	1/1:14,0:14:34.89:545,35,0	0/0:14,0:9:27.09:0,27,532	0/0:16,0:13:34.86:0,35,654	0/0:22,0:17:42.14:0,42,668	0/0:18,0:17:51.04:0,51,787	0/0:17,0:17:34.82:0,35,561	1/1:8,23:24:29.39:1054,29,0	0/0:22,0:22:20.29:0,20,709	0/0:33,0:31:93.08:0,93,1577	0/0:17,0:16:45.15:0,45,732	0/0:16,0:16:42.14:0,42,715	0/0:22,0:21:60.20:0,60,1183	0/0:19,0:19:56.78:0,57,1081	0/0:22,0:22:54.17:0,54,840	0/0:21,0:20:36.61:0,37,966	0/0:15,0:14:6.57:0,7,478	0/0:17,0:17:43.87:0,44,606	1/1:0,0:17:51.10:784,51,0	1/1:23,0:23:66.54:1009,67,0	1/1:29,0:28:84.29:1424,84,0	0/0:21,0:19:41.03:0,41,692	0/0:15,0:14:33.11:0,33,520	0/0:26,0:22:51.17:0,51,826	0/0:21,0:20:25.63:0,26,783	0/0:19,0:19:54.14:0,54,940	1/1:2,15:16:6.02:96,6,0	0/0:32,0:32:85.08:0,85,1403
chr10	106630569	.	C	CTT	1166.54	PASS	AB=0.795;AC=12;AF=0.214;AN=56;BaseQRankSum=3.192;DP=499;FS=6.312;HRun=11;HaplotypeScore=76.6332;InbreedingCoeff=0.7227;MQ=69.61;MQ0=1;MQRankSum=-0.913;QD=8.71;ReadPosRankSum=-4.073;VQSLOD=0.3589;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:35:95.30:0,95,864	1/1:2,0:5:0.50:16,1,0	0/0:12,0:9:13.71:0,14,69	0/1:20,0:13:11.51:12,0,21	0/0:24,0:26:62.43:0,62,547	0/0:19,0:20:53.80:0,54,498	0/0:13,0:13:14.77:0,15,180	1/1:13,24:39:74.67:952,75,0	0/0:13,0:13:27.03:0,27,261	0/0:24,0:24:54.04:0,54,520	0/0:19,0:20:38.79:0,39,412	0/0:12,0:12:30:0,30,290	0/0:11,0:12:23.96:0,24,282	0/0:11,0:12:17.69:0,18,151	0/0:17,0:17:33.03:0,33,320	0/0:11,0:11:20.92:0,21,190	0/0:24,0:24:41.86:0,42,407	0/0:17,0:18:35.65:0,36,311	0/1:7,1:23:4.54:112,0,5	1/1:3,0:18:31.32:112,31,0	1/1:3,0:6:4.99:17,5,0	0/0:8,0:8:11.96:0,12,116	0/0:16,0:17:32.90:0,33,358	0/0:17,0:17:33:0,33,320	0/0:14,0:15:41.79:0,42,385	0/0:30,1:31:31.55:0,32,637	1/1:5,0:23:32.28:111,32,0	0/0:5,0:7:17.50:0,18,140
chr10	106630583	.	GT	G	182.64	PASS	AB=0.900;AC=3;AF=0.054;AN=56;BaseQRankSum=2.467;DP=458;FS=1.144;HRun=9;HaplotypeScore=57.5836;InbreedingCoeff=0.5064;MQ=66.15;MQ0=1;MQRankSum=0.426;QD=7.94;ReadPosRankSum=0.884;VQSLOD=1.2471;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.21:0,93,1038	0/0:6,0:6:15.04:0,15,173	0/0:19,0:10:3.98:0,4,83	0/0:20,0:12:11.20:0,11,117	0/0:24,0:24:66.19:0,66,754	0/0:19,0:19:48.12:0,48,541	0/1:8,1:9:9.41:9,0,155	0/0:30,0:30:77.01:0,77,844	1/1:1,13:14:30.01:275,30,0	0/0:23,0:23:54.15:0,54,615	0/0:19,0:19:51.13:0,51,570	0/0:10,0:10:24.06:0,24,267	0/0:13,0:13:36.07:0,36,402	0/0:10,0:10:27.07:0,27,303	0/0:13,0:13:30.09:0,30,346	0/0:8,0:8:21.06:0,21,242	0/0:20,0:20:48.13:0,48,544	0/0:18,0:18:45.07:0,45,492	0/0:24,0:24:62.78:0,63,662	0/0:15,0:16:47.96:0,48,523	0/0:3,0:3:3.01:0,3,35	0/0:5,0:5:12.04:0,12,138	0/0:14,0:14:30.08:0,30,336	0/0:14,0:14:36.07:0,36,401	0/0:18,0:18:54.15:0,54,614	0/0:30,0:30:84.25:0,84,969	0/0:19,0:19:48.14:0,48,554	0/0:7,0:7:18.05:0,18,208
chr10	106633184	.	G	GAGTGGACAGTGCCCA	2716.32	PASS	AB=0.652;AC=46;AF=0.958;AN=48;BaseQRankSum=-2.735;DP=59;FS=3.118;HRun=0;HaplotypeScore=25.5568;InbreedingCoeff=-0.1973;MQ=108.87;MQ0=0;MQRankSum=-0.440;QD=46.83;ReadPosRankSum=1.367;VQSLOD=2.2964;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:3.01:47,3,0	1/1:1,0:1:3.01:88,3,0	0/1:3,1:7:13.25:716,0,13	0/1:1,0:2:20.15:61,0,20	1/1:1,0:1:3.01:73,3,0	1/1:4,0:4:6.02:147,6,0	1/1:2,0:2:3:25,3,0	1/1:2,0:2:6.02:101,6,0	1/1:2,0:2:3:25,3,0	1/1:1,0:1:3.01:83,3,0	1/1:1,0:1:3.01:73,3,0	1/1:2,0:2:2.41:24,2,0	1/1:5,0:5:9.01:197,9,0	./.	1/1:3,0:3:6.01:74,6,0	1/1:2,0:2:3.01:49,3,0	1/1:2,0:2:5.99:70,6,0	1/1:3,0:3:6.02:121,6,0	1/1:2,0:2:3.01:90,3,0	1/1:3,0:3:6.02:296,6,0	1/1:2,0:2:3.01:90,3,0	1/1:3,0:3:6.02:186,6,0	./.	1/1:2,0:2:2.97:20,3,0	./.	1/1:2,0:2:6.01:121,6,0	./.	1/1:1,0:1:3.01:31,3,0
chr10	106636323	.	CG	C	740.11	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=-0.245;DP=349;FS=0.000;HRun=4;HaplotypeScore=52.9287;InbreedingCoeff=0.8881;MQ=48.86;MQ0=25;MQRankSum=-2.284;QD=17.21;ReadPosRankSum=-0.723;VQSLOD=2.5808;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:51.08:0,51,618	./.	0/0:19,0:5:7.49:0,7,73	0/0:28,0:8:11.02:0,11,95	0/0:13,0:13:21.05:0,21,274	0/0:8,0:6:12.04:0,12,166	0/0:12,0:7:14.86:0,15,138	1/1:4,3:6:14.75:137,15,0	0/0:7,0:5:14.98:0,15,185	0/0:11,0:10:27.04:0,27,325	0/0:10,0:10:24.06:0,24,302	0/0:12,0:12:24.04:0,24,283	0/0:9,0:7:14.76:0,15,123	0/0:5,0:4:12:0,12,114	0/0:11,0:10:15.05:0,15,208	0/0:11,0:10:26.99:0,27,331	0/0:27,0:25:47.89:0,48,477	0/0:24,0:20:42.08:0,42,529	1/1:0,9:8:21.06:243,21,0	1/1:1,3:4:12.03:132,12,0	1/1:3,4:6:12.03:133,12,0	0/0:8,0:8:9.01:0,9,93	0/0:7,0:7:11.96:0,12,126	0/0:20,0:17:20.58:0,21,218	0/0:17,0:17:30.08:0,30,384	0/0:6,0:4:9.02:0,9,110	1/1:7,9:16:26.96:261,27,0	0/0:9,0:8:17.98:0,18,207
chr10	106636339	.	CCAAA	C	311.41	PASS	AB=0.925;AC=7;AF=0.130;AN=54;BaseQRankSum=2.688;DP=417;FS=9.946;HRun=0;HaplotypeScore=75.1568;InbreedingCoeff=0.2252;MQ=45.17;MQ0=36;MQRankSum=-4.856;QD=4.72;ReadPosRankSum=-0.499;VQSLOD=0.4364;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:56.30:0,56,1003	./.	0/0:51,0:7:15.65:0,16,123	0/0:45,0:13:14.32:0,14,126	0/0:16,0:16:24.72:0,25,271	0/1:10,0:8:6.06:6,0,84	0/0:6,0:3:8.86:0,9,78	0/1:11,1:9:1.77:59,0,2	0/0:6,0:4:11.78:0,12,106	0/0:11,0:10:4.31:0,4,377	0/0:11,0:11:14.91:0,15,285	0/0:11,0:11:22.01:0,22,163	0/0:7,0:6:14.94:0,15,187	0/0:4,0:3:9.03:0,9,114	0/0:13,0:12:28.62:0,29,445	0/0:10,0:9:26.91:0,27,349	0/0:26,0:23:8.68:0,9,504	0/0:24,0:20:16.74:0,17,492	1/1:14,0:10:3.88:118,4,0	0/1:7,2:9:5.62:87,0,6	0/1:6,0:6:13.12:70,0,13	0/0:9,0:9:17.99:0,18,255	0/0:7,0:7:17.71:0,18,167	0/0:19,0:16:13.80:0,14,128	0/0:18,0:18:38.82:0,39,562	0/0:13,0:9:18.88:0,19,367	0/1:13,2:15:18.49:93,0,18	0/0:12,0:11:31.44:0,31,379
chr10	106636530	.	A	AAG	1365.17	PASS	AB=0.577;AC=10;AF=0.179;AN=56;BaseQRankSum=-3.260;DP=490;FS=0.523;HRun=0;HaplotypeScore=71.1635;InbreedingCoeff=0.7683;MQ=63.20;MQ0=10;MQRankSum=2.409;QD=15.34;ReadPosRankSum=1.441;VQSLOD=3.1961;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.53:0,61,487	1/1:0,4:4:9.03:121,9,0	0/0:38,0:12:22.43:0,22,179	0/0:25,0:12:2.26:0,2,81	0/0:27,0:27:74.30:0,74,745	0/0:21,0:21:51.57:0,52,451	0/0:18,0:18:50.73:0,51,480	0/1:9,16:29:0.69:482,0,1	0/0:4,0:4:2.31:0,2,38	0/0:17,0:16:39.16:0,39,354	0/0:20,0:20:50.08:0,50,466	0/0:14,0:14:23.98:0,24,219	0/0:12,0:12:30.03:0,30,311	0/0:14,0:14:37.94:0,38,347	0/0:20,0:20:50.96:0,51,525	0/0:11,0:11:32.97:0,33,294	0/0:27,0:27:66.95:0,67,617	0/0:27,0:27:68.98:0,69,716	1/1:4,12:15:33.92:321,34,0	1/1:8,1:9:26.92:252,27,0	1/1:4,4:12:12.62:127,13,0	0/0:8,0:8:21.01:0,21,216	0/0:14,0:13:38.71:0,39,348	0/0:31,0:31:83.98:0,84,839	0/0:9,0:9:27.04:0,27,288	0/0:16,0:15:35.93:0,36,341	0/1:4,11:18:2.16:223,0,2	0/0:6,0:6:16.78:0,17,146
chr10	106637052	.	CTCT	C	2036.57	PASS	AB=0.965;AC=13;AF=0.232;AN=56;BaseQRankSum=6.684;DP=429;FS=1.241;HRun=0;HaplotypeScore=79.0568;InbreedingCoeff=0.8120;MQ=75.29;MQ0=18;MQRankSum=-7.973;QD=17.26;ReadPosRankSum=-2.185;VQSLOD=2.9644;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:16:27.09:0,27,601	1/1:0,9:9:27.09:481,27,0	0/0:47,0:19:37.33:0,37,759	0/1:52,1:29:6.49:6,0,514	0/0:22,0:21:42.14:0,42,997	0/0:17,0:17:39.13:0,39,924	0/0:13,0:11:27.09:0,27,627	1/1:3,7:9:26.82:418,27,0	0/0:8,0:7:3:0,3,67	0/0:16,0:14:33.07:0,33,720	0/0:9,0:8:15.05:0,15,366	0/0:11,0:11:24.08:0,24,584	0/0:13,0:12:33.11:0,33,796	0/0:11,0:10:18.06:0,18,435	0/0:6,0:6:12.04:0,12,292	0/0:13,0:13:30.10:0,30,720	0/0:28,0:27:60.15:0,60,1418	0/0:16,0:14:29.95:0,30,585	1/1:5,6:8:22.48:258,22,0	1/1:2,8:10:26.96:418,27,0	1/1:1,6:7:3.01:47,3,0	0/0:6,0:7:12.04:0,12,292	0/0:4,0:4:6.02:0,6,143	0/0:11,0:8:24.08:0,24,570	0/0:10,0:10:21.07:0,21,495	0/0:19,0:18:42.14:0,42,1005	1/1:2,12:16:35.33:589,35,0	0/0:10,0:9:18.06:0,18,409
chr10	106637100	.	CTCTGTCTCTGTCTCGCTG	C	501.59	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.723;DP=548;FS=0.000;HRun=0;HaplotypeScore=249.5015;InbreedingCoeff=0.8734;MQ=72.47;MQ0=7;MQRankSum=-0.401;QD=71.66;ReadPosRankSum=-1.060;VQSLOD=2.8077;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:51.09:0,51,3257	0/0:8,0:8:23.95:0,24,1223	0/0:40,0:25:9:0,9,638	0/0:71,0:40:32.61:0,33,1046	0/0:17,0:17:42.14:0,42,2896	0/0:19,0:19:42.14:0,42,2718	0/0:25,0:25:69.24:0,69,3951	0/0:22,0:22:45.15:0,45,1471	1/1:0,7:7:12.04:587,12,0	0/0:24,0:24:69.23:0,69,3711	0/0:10,0:10:30.10:0,30,2248	0/0:18,0:18:45.15:0,45,3258	0/0:16,0:16:45.15:0,45,3218	0/0:15,0:15:45.15:0,45,3172	0/0:4,0:4:12.04:0,12,1028	0/0:14,0:14:42.14:0,42,3360	0/0:32,0:32:78.25:0,78,4758	0/0:21,0:21:63.22:0,63,4138	0/0:13,0:11:21.07:0,21,1140	0/0:15,0:15:44.51:0,45,2252	0/0:32,0:32:83.35:0,83,4237	0/0:14,0:14:33.11:0,33,2197	0/0:10,0:10:27.09:0,27,1617	0/0:19,0:19:45.61:0,46,2780	0/0:13,0:13:39.13:0,39,2624	0/0:16,0:16:42.14:0,42,2838	0/0:20,0:20:50.91:0,51,3308	0/0:6,0:6:18.06:0,18,1121
chr10	106638871	.	CAG	C	1139.67	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=8.645;DP=1020;FS=15.282;HRun=0;HaplotypeScore=143.2553;InbreedingCoeff=0.9381;MQ=56.22;MQ0=8;MQRankSum=-0.709;QD=11.06;ReadPosRankSum=-4.236;VQSLOD=1.6818;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:77,0:77:99:0,217,3963	1/1:16,0:16:8.46:52,8,0	0/0:28,0:13:30.07:0,30,453	0/0:38,0:20:37.88:0,38,624	0/0:34,0:33:96.30:0,96,1763	0/0:32,0:32:78.20:0,78,1316	0/0:50,0:50:99:0,141,2488	1/1:31,0:31:56.50:758,57,0	0/0:40,0:40:99:0,108,1915	0/0:55,0:53:99:0,159,2797	0/0:17,0:17:48.13:0,48,823	0/0:47,0:47:99:0,135,2481	0/0:39,0:39:99:0,108,2037	0/0:44,0:44:99:0,120,2155	0/0:45,0:45:99:0,126,2241	0/0:51,0:51:99:0,147,2628	0/0:39,0:39:97.08:0,97,1732	0/0:27,0:27:66.13:0,66,1415	1/1:7,2:6:17.63:178,18,0	./.	1/1:28,8:32:20.84:295,21,0	0/0:35,0:35:99:0,105,1887	0/0:29,0:29:78.11:0,78,1321	0/0:51,0:51:99:0,126,2277	0/0:32,0:32:93.29:0,93,1693	0/0:63,0:63:99:0,181,3361	1/1:11,0:11:2.92:17,3,0	0/0:20,0:20:57.20:0,57,1098
chr10	106638873	.	G	GGC	633.44	PASS	AB=0.946;AC=7;AF=0.130;AN=54;BaseQRankSum=7.699;DP=1016;FS=22.587;HRun=0;HaplotypeScore=147.2569;InbreedingCoeff=0.4343;MQ=55.86;MQ0=9;MQRankSum=-3.672;QD=5.87;ReadPosRankSum=-5.852;VQSLOD=-0.5933;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:77,0:77:99:0,210,3426	1/1:15,1:16:9.03:115,9,0	0/0:26,0:11:23.25:0,23,368	0/0:40,0:19:37.08:0,37,523	0/0:34,0:33:93.30:0,93,1492	0/0:27,0:27:75.22:0,75,1147	0/0:49,0:49:99:0,135,2125	0/1:31,0:31:99:389,0,173	0/0:40,0:40:99:0,108,1664	0/0:53,0:51:99:0,153,2380	0/0:18,0:18:48.11:0,48,720	0/0:48,0:48:99:0,135,2155	0/0:37,0:37:99:0,108,1734	0/0:46,0:46:99:0,120,1906	0/0:45,0:45:99:0,123,1930	0/0:51,0:51:99:0,147,2317	0/0:37,0:37:78.21:0,78,1514	0/0:26,0:26:78.16:0,78,1237	0/1:10,0:6:38.33:38,0,58	./.	0/1:29,7:32:61.85:113,0,62	0/0:35,0:35:99:0,105,1658	0/0:30,0:30:75:0,75,1188	0/0:50,0:50:99:0,123,1906	0/0:33,0:33:93.30:0,93,1466	0/0:60,0:60:99:0,181,2890	1/1:15,0:15:6:108,6,0	0/0:20,0:20:60.18:0,60,950
chr10	106638953	.	GAC	G	164.33	PASS	AB=0.855;AC=4;AF=0.074;AN=54;BaseQRankSum=4.860;DP=924;FS=1.131;HRun=0;HaplotypeScore=116.7524;InbreedingCoeff=-0.0761;MQ=51.22;MQ0=57;MQRankSum=-1.622;QD=1.01;ReadPosRankSum=-2.942;VQSLOD=1.7658;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,1:54:99:0,123,2028	./.	0/1:85,0:6:2.66:3,0,80	0/0:63,1:6:7.63:0,8,196	0/0:16,0:16:44.80:0,45,694	0/0:24,0:24:57.16:0,57,915	0/0:41,0:41:99:0,117,1918	0/0:20,0:15:18.04:0,18,251	0/1:20,6:26:99:160,0,111	0/0:45,0:42:99:0,111,1824	0/0:14,0:14:39.13:0,39,665	0/0:47,0:46:99:0,129,2122	0/0:35,0:35:90.30:0,90,1498	0/0:39,0:39:99:0,105,1725	0/0:36,0:36:96.16:0,96,1563	0/0:35,0:35:90.29:0,90,1492	0/0:30,0:30:66.12:0,66,1047	0/0:23,0:24:64.05:0,64,1045	0/0:18,0:7:15.93:0,16,228	0/0:18,3:20:33.09:0,33,498	0/1:27,5:28:84.80:85,0,124	0/0:27,0:27:74.25:0,74,1156	0/0:23,0:23:66.23:0,66,1095	0/0:53,0:53:99:0,114,1897	0/0:25,0:25:69.21:0,69,1128	0/0:53,0:52:99:0,138,2342	0/1:13,7:20:17.49:17,0,406	0/0:14,0:14:30.09:0,30,473
chr10	106639012	.	ATG	A	207.71	PASS	AB=0.835;AC=4;AF=0.071;AN=56;BaseQRankSum=7.543;DP=870;FS=44.001;HRun=0;HaplotypeScore=144.1556;InbreedingCoeff=0.4156;MQ=60.32;MQ0=3;MQRankSum=-5.438;QD=4.52;ReadPosRankSum=-3.436;VQSLOD=0.2338;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,129,2527	1/1:4,1:5:9.03:126,9,0	0/0:41,0:21:63.21:0,63,1177	0/0:56,0:40:96.49:0,96,1703	0/0:22,0:22:57.06:0,57,1135	0/0:23,1:24:60.57:0,61,1220	0/0:39,0:39:99:0,105,2037	0/0:44,1:45:99:0,129,2473	0/0:32,0:32:46.86:0,47,1299	0/0:25,0:25:25.50:0,25,1297	0/0:21,0:20:48.16:0,48,926	0/0:38,0:38:99:0,111,2200	0/0:34,1:35:59.82:0,60,1843	0/0:42,2:44:85.65:0,86,2267	0/0:33,0:33:75.86:0,76,1746	0/0:38,0:38:99:0,101,2022	0/0:25,0:25:71.94:0,72,1339	0/0:27,1:28:24.06:0,24,1266	0/0:15,0:14:36.08:0,36,684	0/1:19,4:23:54.25:54,0,859	0/0:37,0:36:42.14:0,42,855	0/0:29,0:29:63.19:0,63,1592	0/0:23,0:23:57.18:0,57,1146	0/0:41,0:40:99:0,108,2123	0/0:20,0:20:60.20:0,60,1159	0/0:49,0:48:99:0,144,2872	0/1:14,4:18:99:136,0,639	0/0:14,0:14:39.13:0,39,756
chr10	106639027	.	GAT	G	152.87	PASS	AB=0.993;AC=7;AF=0.125;AN=56;BaseQRankSum=10.941;DP=866;FS=31.057;HRun=0;HaplotypeScore=148.6414;InbreedingCoeff=0.1696;MQ=57.17;MQ0=10;MQRankSum=-0.934;QD=1.09;ReadPosRankSum=-1.040;VQSLOD=0.8973;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:76.84:0,77,1441	1/1:8,0:7:11.95:95,12,0	0/0:35,0:14:22.49:0,22,218	0/0:43,0:23:52.24:0,52,564	0/0:25,0:25:34.21:0,34,728	0/0:26,0:25:40.63:0,41,815	0/0:36,0:36:76.83:0,77,1324	0/0:41,0:39:26.69:0,27,685	0/0:32,0:32:51.16:0,51,1064	0/0:31,0:31:76.17:0,76,1250	0/0:22,0:20:28.06:0,28,592	0/0:36,1:37:63.32:0,63,1420	0/0:30,0:30:26.93:0,27,1195	0/0:43,0:43:43.62:0,44,1608	0/0:35,0:35:63.76:0,64,1455	0/0:40,0:41:32.05:0,32,1529	0/0:27,0:27:57.41:0,57,1043	0/1:28,1:28:28.70:29,0,720	0/1:15,0:11:15.10:15,0,160	0/1:27,0:27:10.98:11,0,246	0/1:41,0:41:7.90:8,0,294	0/0:27,0:27:81.18:0,81,1254	0/0:20,3:23:5.96:0,6,694	0/0:36,0:35:81.77:0,82,1294	0/0:22,0:22:47.09:0,47,811	0/0:50,0:48:64.57:0,65,1600	0/1:20,0:20:99:124,0,139	0/0:17,0:17:48.14:0,48,846
chr10	106639029	.	TAC	T	175.87	PASS	AB=0.950;AC=11;AF=0.204;AN=54;BaseQRankSum=6.581;DP=872;FS=20.124;HRun=0;HaplotypeScore=146.8064;InbreedingCoeff=-0.1027;MQ=56.97;MQ0=11;MQRankSum=-0.206;QD=0.58;ReadPosRankSum=0.421;VQSLOD=1.6415;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:46,4:49:77.40:77,0,824	1/1:7,0:6:5.95:17,6,0	./.	0/0:45,0:24:11.67:0,12,108	0/0:20,3:24:1.64:0,2,457	0/0:24,2:26:17.14:0,17,642	0/0:31,3:35:37.63:0,38,964	0/0:43,0:41:38.63:0,39,257	0/1:30,1:31:7.83:8,0,750	0/0:33,1:34:40.76:0,41,1034	0/1:19,1:18:4.40:4,0,388	0/0:37,0:37:36.91:0,37,952	0/1:29,2:31:18.17:18,0,951	0/0:41,2:43:8.61:0,9,1221	0/0:36,0:36:48.60:0,49,1120	0/1:37,3:40:27.26:27,0,1155	0/0:26,1:27:19.71:0,20,747	0/1:25,3:29:60.35:60,0,482	0/0:15,0:11:6.60:0,7,30	0/0:28,0:28:3.19:0,3,45	0/0:41,0:41:15.07:0,15,137	0/0:26,0:26:60.19:0,60,902	0/1:23,1:24:23.67:24,0,483	0/0:34,1:34:23.36:0,23,789	0/0:19,2:22:7.66:0,8,570	0/1:47,2:47:56.56:57,0,874	0/1:19,0:19:22.92:23,0,32	0/0:17,0:17:45.15:0,45,685
chr10	106639410	.	CA	C	538.79	PASS	AB=0.981;AC=6;AF=0.111;AN=54;BaseQRankSum=-4.359;DP=456;FS=3.667;HRun=10;HaplotypeScore=52.6511;InbreedingCoeff=0.2724;MQ=48.92;MQ0=25;MQRankSum=-4.449;QD=6.91;ReadPosRankSum=-1.500;VQSLOD=0.9408;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,99,1093	0/0:2,0:2:2.60:0,3,10	0/1:13,0:4:4.75:5,0,70	./.	0/0:19,0:19:39.03:0,39,407	0/0:20,0:20:54.56:0,55,555	0/0:21,1:22:28.19:0,28,521	1/1:27,1:24:7.99:410,8,0	0/0:4,0:5:8.80:0,9,54	0/0:28,0:27:72.18:0,72,783	0/0:14,0:13:24.06:0,24,265	0/0:13,0:13:30.04:0,30,318	0/0:6,0:5:9.02:0,9,100	0/0:13,0:13:33.05:0,33,352	0/1:11,1:11:4.99:5,0,169	0/0:13,0:13:33.07:0,33,354	0/0:34,0:32:90.21:0,90,975	0/0:29,0:29:78.18:0,78,843	0/1:20,0:17:6.87:220,0,7	0/0:5,0:4:2.60:0,3,10	0/1:5,0:5:6.17:6,0,13	0/0:6,1:7:15.04:0,15,166	0/0:12,0:11:21.06:0,21,232	0/0:13,0:12:33.09:0,33,363	0/0:19,0:18:42.11:0,42,465	0/0:23,0:24:53.96:0,54,569	0/0:15,0:15:18.17:0,18,72	0/0:15,0:14:39.09:0,39,423
chr10	106639415	.	A	AAAAAT	2928.81	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=-9.632;DP=474;FS=4.089;HRun=0;HaplotypeScore=87.7756;InbreedingCoeff=0.8116;MQ=50.29;MQ0=23;MQRankSum=-5.675;QD=29.89;ReadPosRankSum=-3.152;VQSLOD=2.6314;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,105,1838	1/1:0,3:3:3.01:87,3,0	0/0:13,0:4:12.03:0,12,148	./.	0/0:17,0:17:45.59:0,46,696	0/0:22,0:21:60.59:0,61,908	0/0:24,0:24:60.13:0,60,963	1/1:7,22:28:39.84:1021,40,0	0/0:7,0:5:1.25:0,1,4	0/0:26,0:25:72.23:0,72,1316	0/0:15,0:13:27.08:0,27,494	0/0:15,0:15:36.06:0,36,573	0/0:7,0:6:15.03:0,15,228	0/0:13,0:13:33.07:0,33,605	0/1:10,0:9:4.97:5,0,299	0/0:13,0:13:33.07:0,33,580	0/0:37,0:35:99:0,99,1585	0/0:29,0:29:81.24:0,81,1373	1/1:4,17:20:57.07:922,57,0	1/1:2,3:7:6.01:173,6,0	1/1:1,6:9:9.02:260,9,0	0/0:9,0:9:21.05:0,21,319	0/0:11,0:10:23.90:0,24,360	0/0:13,0:12:33.11:0,33,590	0/0:17,0:16:45.14:0,45,771	0/0:23,0:23:63.12:0,63,956	1/1:3,12:16:23.99:632,24,0	0/0:15,0:14:39.12:0,39,726
chr10	106639494	.	GGT	G	176	PASS	AB=0.909;AC=13;AF=0.250;AN=52;BaseQRankSum=5.748;DP=562;FS=12.492;HRun=0;HaplotypeScore=74.3249;InbreedingCoeff=-0.3129;MQ=60.40;MQ0=15;MQRankSum=1.832;QD=0.54;ReadPosRankSum=1.255;VQSLOD=0.3505;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,1:29:26.16:26,0,177	0/0:8,0:8:9.01:0,9,113	./.	./.	0/0:12,0:12:6.02:0,6,90	0/0:12,0:11:6.49:0,6,90	0/1:30,4:34:69.08:69,0,286	1/1:15,0:13:0.45:4,0,0	0/0:8,0:9:6.01:0,6,68	0/0:13,0:13:9.02:0,9,119	0/0:15,0:15:3.01:0,3,45	0/0:23,0:24:0.93:0,1,166	0/0:10,0:10:15.02:0,15,184	0/0:16,0:16:15.01:0,15,180	0/1:13,1:15:15.02:15,0,168	0/1:14,1:18:48.37:48,0,199	0/1:30,5:36:53.13:53,0,629	0/1:41,2:43:11:11,0,594	0/0:15,0:15:3.01:0,3,45	0/0:15,0:15:9.03:0,9,135	0/1:46,1:47:11.12:11,0,362	0/0:13,0:13:3.01:0,3,45	0/0:12,0:12:3.01:0,3,45	0/1:30,3:33:5.90:6,0,745	0/0:15,0:15:9.02:0,9,113	0/1:23,0:23:17.98:18,0,158	0/1:9,1:11:27.04:27,0,39	0/1:18,2:20:19.51:20,0,201
chr10	106641612	.	TCTCGA	T	4604.16	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.031;DP=539;FS=12.462;HRun=0;HaplotypeScore=102.6017;InbreedingCoeff=0.9719;MQ=80.75;MQ0=0;MQRankSum=-9.904;QD=44.27;ReadPosRankSum=0.904;VQSLOD=4.3335;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,3675	1/1:0,5:5:11.88:259,12,0	0/0:17,0:17:48.13:0,48,1174	0/0:14,0:14:33.11:0,33,908	0/0:18,0:18:48.16:0,48,1500	0/0:16,0:16:45.12:0,45,1279	0/0:32,0:32:90.29:0,90,2580	1/1:1,9:10:27.09:548,27,0	1/1:1,9:10:27.09:582,27,0	0/0:23,0:23:69.23:0,69,2042	0/0:6,0:6:18.06:0,18,488	0/0:26,0:26:78.27:0,78,2386	0/0:13,0:13:39.13:0,39,1228	0/0:16,0:16:48.16:0,48,1501	0/0:17,0:17:48.16:0,48,1495	0/0:15,0:15:42.14:0,42,1330	0/0:41,0:41:99:0,120,3800	0/0:34,0:33:99:0,99,3119	1/1:0,23:23:69.24:1495,69,0	1/1:0,4:4:6.02:129,6,0	1/1:4,32:36:48.12:939,48,0	0/0:8,0:8:21.07:0,21,662	0/0:9,0:9:27.09:0,27,826	0/0:28,0:28:78.27:0,78,2459	0/0:15,0:15:45.15:0,45,1353	0/0:34,0:34:99:0,99,2998	1/1:1,15:16:30.10:651,30,0	0/0:11,0:11:33.11:0,33,1044
chr10	106646418	.	GACTTGCTTACT	G	8769.91	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.608;DP=630;FS=7.524;HRun=0;HaplotypeScore=202.8823;InbreedingCoeff=0.9994;MQ=86.53;MQ0=0;MQRankSum=-13.695;QD=80.46;ReadPosRankSum=-1.678;VQSLOD=3.7505;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,6871	1/1:0,11:11:30.10:1104,30,0	0/0:23,0:23:63.21:0,63,2881	0/0:24,0:24:69.71:0,70,3582	0/0:14,0:14:42.14:0,42,2488	0/0:14,0:14:42.14:0,42,2261	0/0:20,0:20:60.19:0,60,3312	1/1:0,24:24:71.88:1805,72,0	0/0:19,0:19:57.20:0,57,3096	0/0:22,0:22:66.23:0,66,3900	0/0:12,0:12:33.10:0,33,1705	0/0:38,0:38:99:0,114,6515	0/0:30,0:30:87.30:0,87,4989	0/0:28,0:28:84.25:0,84,4639	0/0:19,0:19:57.20:0,57,3200	0/0:24,0:24:72.25:0,72,4014	0/0:41,0:41:99:0,123,6952	0/0:24,0:24:72.23:0,72,3938	1/1:0,20:20:60.01:1717,60,0	1/1:0,23:23:60.20:2082,60,0	1/1:0,22:22:36.12:1168,36,0	0/0:19,0:19:57.20:0,57,3180	0/0:18,0:18:54.15:0,54,3036	0/0:32,0:32:93.32:0,93,5499	0/0:19,0:19:57.20:0,57,3143	0/0:26,0:26:78.27:0,78,4614	1/1:0,9:9:24.08:893,24,0	0/0:13,0:13:39.13:0,39,2218
chr10	106647875	.	GAGA	G	5653.04	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.696;DP=736;FS=0.362;HRun=0;HaplotypeScore=107.8625;InbreedingCoeff=0.9990;MQ=79.30;MQ0=0;MQRankSum=-8.526;QD=40.96;ReadPosRankSum=-3.136;VQSLOD=5.2672;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,2653	1/1:1,9:10:24.08:405,24,0	0/0:23,0:23:59.66:0,60,1318	0/0:22,0:22:44.96:0,45,1061	0/0:29,0:29:84.29:0,84,1859	0/0:14,0:14:42.13:0,42,924	0/0:25,0:25:72.25:0,72,1657	1/1:1,31:32:93.18:1452,93,0	0/0:26,0:26:75.21:0,75,1636	0/0:17,0:17:48.16:0,48,1098	0/0:11,0:11:33.11:0,33,740	0/0:43,0:43:99:0,129,2817	0/0:28,0:28:84.29:0,84,1913	0/0:33,0:33:96.33:0,96,2194	0/0:40,0:40:99:0,120,2729	0/0:27,0:27:78.27:0,78,1799	0/0:38,0:38:99:0,114,2522	0/0:29,0:29:87.30:0,87,1975	1/1:0,23:23:69.13:1090,69,0	1/1:0,11:11:29.78:449,30,0	1/1:2,36:38:75.23:1184,75,0	0/0:24,0:24:72.18:0,72,1589	0/0:16,0:16:45.15:0,45,1001	0/0:52,0:52:99:0,154,3416	0/0:22,0:22:63.22:0,63,1448	0/0:27,0:27:81.28:0,81,1840	1/1:1,23:24:63.22:1073,63,0	0/0:8,0:8:24.08:0,24,553
chr10	106650414	.	CT	C	4027.77	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.401;DP=650;FS=4.559;HRun=1;HaplotypeScore=81.5759;InbreedingCoeff=0.9993;MQ=81.35;MQ0=0;MQRankSum=-2.740;QD=34.13;ReadPosRankSum=-0.280;VQSLOD=3.3249;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,1785	1/1:0,12:12:30.10:379,30,0	0/0:20,0:19:43.90:0,44,598	0/0:18,0:17:33.32:0,33,539	0/0:18,0:18:54.17:0,54,800	0/0:22,0:22:66.17:0,66,939	0/0:40,0:40:99:0,120,1711	1/1:5,5:10:29.86:307,30,0	0/0:21,0:21:63.14:0,63,892	0/0:25,0:25:72.22:0,72,1044	0/0:10,0:10:30.08:0,30,435	0/0:31,0:31:93.31:0,93,1409	0/0:28,0:28:81.24:0,81,1212	0/0:32,0:32:96.26:0,96,1395	0/0:39,0:39:99:0,117,1717	0/0:19,0:19:57.15:0,57,806	0/0:30,0:30:90.26:0,90,1329	0/0:15,0:15:45.11:0,45,661	1/1:0,23:23:68.95:806,69,0	1/1:0,9:9:26.88:320,27,0	1/1:9,32:41:99:1348,111,0	0/0:17,0:17:48.13:0,48,685	0/0:12,0:12:33.11:0,33,493	0/0:43,0:43:99:0,129,1920	0/0:14,0:14:42.14:0,42,631	0/0:23,0:23:65.95:0,66,958	1/1:0,23:23:69.17:868,69,0	0/0:12,0:12:36.11:0,36,528
chr10	106658359	.	TAA	T	2019.32	PASS	AB=0.640;AC=13;AF=0.232;AN=56;BaseQRankSum=4.994;DP=562;FS=8.230;HRun=15;HaplotypeScore=72.8757;InbreedingCoeff=0.8711;MQ=66.53;MQ0=3;MQRankSum=1.128;QD=14.02;ReadPosRankSum=3.529;VQSLOD=2.5368;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:47:99:0,114,1360	1/1:5,8:13:23.88:210,24,0	0/0:28,0:18:21.06:0,21,234	0/0:10,0:9:5.75:0,6,52	0/0:16,1:19:23.76:0,24,533	0/0:19,0:19:51.13:0,51,635	0/0:17,0:19:52.59:0,53,588	1/1:5,24:31:74.30:615,74,0	0/1:7,1:16:8.74:9,0,162	0/0:23,0:23:50.36:0,50,630	0/0:20,0:21:52.62:0,53,578	0/0:19,0:19:48.11:0,48,588	0/0:7,0:8:20.54:0,21,232	0/0:22,0:23:51.99:0,52,581	0/0:19,0:21:50.48:0,50,596	0/0:13,1:17:6.65:0,7,351	0/0:15,0:16:39.81:0,40,478	0/0:19,0:21:50.13:0,50,602	1/1:6,13:19:26.72:274,27,0	1/1:5,13:18:35.88:336,36,0	1/1:3,17:20:44.94:394,45,0	0/0:12,0:12:32.31:0,32,400	0/0:18,0:19:50.05:0,50,565	0/0:20,0:20:45.03:0,45,526	0/0:15,0:18:21.44:0,21,483	0/0:25,0:26:56.73:0,57,680	1/1:3,23:26:41.97:370,42,0	0/0:9,0:10:26.57:0,27,329
chr10	106661137	.	C	CT	1165.56	PASS	AB=0.959;AC=16;AF=0.286;AN=56;BaseQRankSum=-2.183;DP=594;FS=2.998;HRun=12;HaplotypeScore=72.2296;InbreedingCoeff=0.5614;MQ=70.82;MQ0=6;MQRankSum=0.463;QD=6.62;ReadPosRankSum=-3.250;VQSLOD=1.7565;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:57.97:0,58,524	1/1:3,3:6:3:29,3,0	0/0:23,0:17:7.45:0,7,96	0/1:20,0:19:10.87:11,0,58	0/0:17,0:18:40.74:0,41,290	0/0:26,0:26:42.90:0,43,309	0/0:29,0:30:43.20:0,43,414	1/1:4,14:18:21.79:330,22,0	0/0:10,0:10:20.83:0,21,153	0/0:25,0:25:56.63:0,57,415	0/0:17,0:17:44.73:0,45,328	0/0:28,0:30:54.59:0,55,439	0/0:18,0:19:36.56:0,37,266	0/1:14,0:14:15.64:16,0,110	0/1:12,2:15:12.43:12,0,172	0/0:21,0:20:43.37:0,43,295	0/0:27,0:29:66.69:0,67,471	0/0:23,1:25:29.43:0,29,370	1/1:7,8:15:2.13:182,2,0	1/1:5,17:22:19.99:314,20,0	1/1:6,14:21:17.86:160,18,0	0/0:15,1:16:2.92:0,3,187	0/1:16,1:18:5.48:5,0,188	0/0:32,0:33:79.46:0,79,568	0/0:20,0:22:49.49:0,49,353	0/0:25,0:25:45.12:0,45,326	1/1:6,14:21:17.23:284,17,0	0/0:12,0:11:29.71:0,30,212
chr10	106662090	.	C	CAAAG	8362.36	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.049;DP=715;FS=10.130;HRun=0;HaplotypeScore=126.2816;InbreedingCoeff=0.9936;MQ=80.08;MQ0=0;MQRankSum=-12.413;QD=63.35;ReadPosRankSum=-3.538;VQSLOD=5.6665;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,2099	1/1:0,5:5:12.04:301,12,0	0/0:14,0:14:36.08:0,36,590	0/0:25,0:25:60.74:0,61,1118	0/0:24,0:24:60.20:0,60,1147	0/0:19,0:19:51.12:0,51,915	0/0:41,0:41:99:0,117,2267	1/1:4,18:22:66.18:1740,66,0	0/0:30,0:30:87.28:0,87,1639	0/0:26,0:26:63.19:0,63,1174	0/0:24,0:24:69.24:0,69,1298	0/0:35,0:35:99:0,105,1901	0/0:26,0:26:75.26:0,75,1440	0/0:28,0:28:84.24:0,84,1526	0/0:35,0:35:99:0,105,1890	0/0:23,0:23:69.22:0,69,1305	0/0:30,0:30:90.30:0,90,1711	0/0:36,0:36:99:0,99,1919	1/1:5,15:22:66.18:1695,66,0	1/1:3,11:14:36.12:834,36,0	1/1:11,27:41:77.88:1770,78,0	0/0:25,0:25:60.19:0,60,1116	0/0:25,0:25:66.23:0,66,1278	0/0:34,0:34:99:0,102,1964	0/0:12,0:12:33.11:0,33,640	0/0:18,0:18:54.19:0,54,1035	1/1:3,25:28:78.05:2023,78,0	0/0:14,0:14:36.12:0,36,644
chr10	106662988	.	TAA	T	2870.46	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.827;DP=636;FS=7.825;HRun=9;HaplotypeScore=86.4623;InbreedingCoeff=0.9958;MQ=78.73;MQ0=0;MQRankSum=-2.140;QD=27.08;ReadPosRankSum=-0.938;VQSLOD=3.1154;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:45:99:0,133,2051	1/1:1,7:8:18.01:194,18,0	0/0:16,0:17:41.69:0,42,562	0/0:20,0:20:41.95:0,42,580	0/0:13,0:13:39.13:0,39,612	0/0:23,0:23:66.23:0,66,1083	0/0:41,0:41:99:0,102,1645	1/1:3,23:26:69.14:778,69,0	0/0:2,1:28:27.93:0,28,176	0/0:20,0:20:51.14:0,51,809	0/0:11,0:11:33.11:0,33,541	0/0:25,0:26:72.20:0,72,1147	0/0:21,0:21:51.16:0,51,813	0/0:30,0:31:86.37:0,86,1326	0/0:27,0:27:72.25:0,72,1182	0/0:28,0:29:77.75:0,78,1239	0/0:47,0:47:99:0,111,1787	0/0:33,0:33:87.26:0,87,1385	1/1:1,14:15:42.11:478,42,0	1/1:1,7:8:18.05:210,18,0	1/1:3,27:30:72.21:839,72,0	0/0:16,0:16:45.15:0,45,739	0/0:10,0:10:27.08:0,27,420	0/0:29,0:29:81.28:0,81,1329	0/0:10,0:10:24.07:0,24,369	0/0:19,0:19:48.16:0,48,786	1/1:0,19:19:48.14:559,48,0	0/0:14,0:14:42.14:0,42,683
chr10	106663308	.	CACAG	C	1043.58	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.126;DP=349;FS=0.820;HRun=0;HaplotypeScore=55.8200;InbreedingCoeff=0.8600;MQ=75.64;MQ0=0;MQRankSum=1.584;QD=18.64;ReadPosRankSum=0.302;VQSLOD=2.9024;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:33.06:0,33,503	1/1:0,2:2:3.01:55,3,0	0/0:19,0:17:44.31:0,44,1082	0/0:16,0:9:26.65:0,27,458	0/0:11,0:11:30.07:0,30,547	0/0:15,0:15:39.12:0,39,658	0/0:16,0:16:45.13:0,45,848	1/1:1,16:17:45.09:713,45,0	0/0:5,0:5:12.04:0,12,289	0/0:11,0:11:30.97:0,31,508	0/0:11,0:11:33.02:0,33,406	0/0:13,0:12:36.07:0,36,635	0/0:14,0:14:39.10:0,39,747	0/0:15,0:15:36.05:0,36,573	0/0:14,0:14:42.12:0,42,761	0/0:11,0:11:33.06:0,33,585	0/0:12,0:12:30.56:0,31,507	0/0:12,0:12:31.82:0,32,588	1/1:0,11:11:29.96:308,30,0	1/1:7,0:7:14.88:114,15,0	1/1:1,18:19:0.43:1,0,0	0/0:13,0:13:36.09:0,36,626	0/0:12,0:12:36.09:0,36,665	0/0:17,0:17:47.70:0,48,843	0/0:9,0:9:27.07:0,27,490	0/0:11,0:11:33.10:0,33,559	0/0:0,12:12:1.25:0,1,3	0/0:9,0:9:24.01:0,24,329
chr10	106663310	.	CAG	C	731.36	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.770;DP=353;FS=0.000;HRun=0;HaplotypeScore=46.7077;InbreedingCoeff=0.8648;MQ=75.64;MQ0=0;MQRankSum=1.869;QD=12.83;ReadPosRankSum=-1.499;VQSLOD=2.9729;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:32.98:0,33,314	1/1:2,0:2:3.01:36,3,0	0/0:18,0:17:44.27:0,44,728	0/0:16,0:9:26.45:0,26,336	0/0:12,0:12:33.04:0,33,400	0/0:15,0:15:38.99:0,39,380	0/0:16,0:16:42.03:0,42,482	1/1:17,0:17:45.08:502,45,0	0/0:6,0:6:15.03:0,15,215	0/0:11,0:11:30.05:0,30,328	0/0:12,0:12:35.96:0,36,313	0/0:14,0:13:38.32:0,38,395	0/0:14,0:14:39.03:0,39,471	0/0:15,0:15:36.01:0,36,398	0/0:15,0:15:43.25:0,43,472	0/0:11,0:11:29.19:0,29,367	0/0:12,0:12:30.45:0,30,293	0/0:11,0:11:30.02:0,30,354	1/1:11,0:11:29.89:246,30,0	1/1:0,8:8:14.74:95,15,0	1/1:18,1:19:0.47:1,0,0	0/0:14,0:14:38.99:0,39,406	0/0:12,0:12:36.04:0,36,429	0/0:17,0:17:47.39:0,47,520	0/0:9,0:9:27.02:0,27,322	0/0:11,0:11:33.03:0,33,330	0/0:12,0:12:0.45:0,0,1	0/0:9,0:9:23.99:0,24,256
chr10	106663583	.	CCCTCTCTCTCTCTT	C	3007.13	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=2.435;DP=680;FS=4.340;HRun=0;HaplotypeScore=235.0807;InbreedingCoeff=0.8162;MQ=67.93;MQ0=22;MQRankSum=-3.019;QD=17.18;ReadPosRankSum=-4.061;VQSLOD=1.2500;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:99:0,123,6391	1/1:6,0:6:15.03:296,15,0	0/0:45,0:17:0.77:0,1,137	0/1:67,0:26:35.54:36,0,183	0/0:19,0:19:51.07:0,51,2319	0/0:15,0:14:39.01:0,39,1073	0/0:31,0:32:93.22:0,93,3206	1/1:17,0:17:47.68:509,48,0	0/0:21,0:21:59.84:0,60,2995	0/0:22,0:22:66.20:0,66,2670	0/0:11,0:10:30.03:0,30,1632	0/0:32,0:32:96.33:0,96,5042	0/0:20,0:20:59.40:0,59,2441	0/0:27,0:27:74.58:0,75,3659	0/0:31,0:31:90.25:0,90,4732	0/0:35,0:34:99:0,105,4541	0/0:26,0:26:64.32:0,64,2822	0/0:16,0:15:20.63:0,21,1870	1/1:0,14:14:38.93:507,39,0	1/1:1,16:16:3.01:79,3,0	1/1:28,0:28:44.91:654,45,0	0/0:7,0:6:18.03:0,18,786	0/0:22,0:22:62.77:0,63,2533	0/0:25,0:23:65.77:0,66,2311	0/0:14,0:13:39.12:0,39,2077	0/0:21,0:21:63.13:0,63,3018	1/1:1,25:26:29.91:1109,30,0	0/0:21,0:18:54.16:0,54,2726
chr10	106663597	.	TTC	T	43.96	PASS	AB=0.968;AC=8;AF=0.148;AN=54;BaseQRankSum=7.023;DP=630;FS=30.918;HRun=0;HaplotypeScore=99.6023;InbreedingCoeff=0.0911;MQ=61.44;MQ0=12;MQRankSum=-0.705;QD=0.25;ReadPosRankSum=1.976;VQSLOD=0.0733;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,1:49:93.60:0,94,1842	0/1:5,0:5:0.30:0,0,20	0/0:20,0:8:6.02:0,6,72	0/1:34,0:11:23.43:23,0,62	0/0:20,1:21:6.15:0,6,486	0/0:13,0:12:21.96:0,22,333	0/1:27,1:28:41.02:41,0,719	0/0:16,0:16:11.61:0,12,80	0/0:23,0:23:60.20:0,60,950	0/0:25,0:25:57.19:0,57,904	0/0:13,0:12:30.10:0,30,469	0/0:35,0:35:87.28:0,87,1345	0/0:19,0:19:2.92:0,3,482	0/1:26,1:27:6.53:7,0,805	0/0:32,0:32:78.25:0,78,1205	0/1:33,1:35:15.41:15,0,1087	0/0:24,0:24:57.15:0,57,842	0/0:21,0:20:51.06:0,51,711	0/0:15,0:15:4.02:0,4,68	./.	0/0:29,0:29:0.46:0,0,1	0/0:9,0:8:21.07:0,21,329	0/0:17,1:18:0.17:0,0,442	0/0:21,0:20:9.49:0,9,629	0/0:12,0:11:27.09:0,27,430	0/1:17,2:19:23.38:23,0,582	1/1:26,0:26:18.76:60,19,0	0/0:24,0:21:57.18:0,57,870
chr10	106666618	.	CAAGGGGTGGTGGCACTCACGTATA	C	8618.13	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.819;DP=704;FS=10.940;HRun=0;HaplotypeScore=427.4117;InbreedingCoeff=0.9758;MQ=78.86;MQ0=0;MQRankSum=-7.502;QD=80.54;ReadPosRankSum=0.770;VQSLOD=3.1005;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,166,16632	1/1:3,2:5:6.02:393,6,0	0/0:18,0:18:45.15:0,45,2898	0/0:22,0:22:54.19:0,54,4081	0/0:24,0:24:72.25:0,72,6956	0/0:13,0:13:36.12:0,36,3939	0/0:23,0:23:66.21:0,66,5912	1/1:15,12:27:36.11:1238,36,0	0/0:37,0:37:99:0,108,10204	0/0:30,0:30:78.27:0,78,8117	0/0:18,0:18:54.19:0,54,4991	0/0:34,0:34:96.32:0,96,9527	0/0:19,0:19:57.20:0,57,6180	0/0:24,0:24:69.24:0,69,7304	0/0:39,0:39:99:0,114,11273	0/0:38,0:38:99:0,108,11431	0/0:27,0:27:75.26:0,75,7841	0/0:20,0:20:60.18:0,60,5445	1/1:7,6:13:18.06:933,18,0	1/1:10,18:28:45.15:2811,45,0	1/1:8,8:15:21.07:1349,21,0	0/0:32,0:32:90.29:0,90,8318	0/0:26,0:26:75.26:0,75,7314	0/0:27,0:26:81.27:0,81,8282	0/0:25,0:25:72.25:0,72,7662	0/0:33,0:33:90.30:0,90,9110	1/1:7,11:18:30.10:1894,30,0	0/0:12,0:12:36.12:0,36,3928
chr10	106666824	.	G	GGCACGGT	9310.74	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.000;DP=724;FS=12.573;HRun=0;HaplotypeScore=175.2067;InbreedingCoeff=0.9931;MQ=83.55;MQ0=0;MQRankSum=-13.929;QD=67.96;ReadPosRankSum=-3.006;VQSLOD=3.2538;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,169,4363	1/1:5,9:14:27.09:1055,27,0	0/0:25,0:25:72.22:0,72,1749	0/0:25,0:25:66.23:0,66,1725	0/0:41,0:41:99:0,117,2912	0/0:9,0:9:27.09:0,27,707	0/0:25,0:25:72.25:0,72,1831	1/1:21,11:35:99:3460,99,0	0/0:30,0:30:78.25:0,78,1989	0/0:33,0:33:90.31:0,90,2320	0/0:29,0:29:87.28:0,87,2121	0/0:18,0:18:51.18:0,51,1292	0/0:25,0:25:69.22:0,69,1720	0/0:22,0:22:66.23:0,66,1683	0/0:31,0:31:93.32:0,93,2407	0/0:24,0:24:69.22:0,69,1716	0/0:27,0:27:78.25:0,78,1954	0/0:18,0:18:51.18:0,51,1329	1/1:11,10:22:63.01:1828,63,0	1/1:11,12:28:36.12:1279,36,0	1/1:9,5:18:12.04:386,12,0	0/0:28,0:28:81.26:0,81,2053	0/0:25,0:25:75.26:0,75,1951	0/0:22,0:22:60.21:0,60,1540	0/0:22,0:22:66.18:0,66,1619	0/0:39,0:39:99:0,114,2882	1/1:8,10:20:38.23:1302,38,0	0/0:9,0:9:27.09:0,27,712
chr10	106671351	.	GGGGATGGGATGGGATGGGAT	G	755.07	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=1.819;DP=502;FS=4.601;HRun=0;HaplotypeScore=245.4529;InbreedingCoeff=0.6727;MQ=89.89;MQ0=5;MQRankSum=-2.826;QD=8.30;ReadPosRankSum=0.840;VQSLOD=2.2516;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:51.13:0,51,3655	1/1:9,0:8:9.02:113,9,0	0/0:31,0:25:5.76:0,6,19	0/0:71,0:42:19.98:0,20,65	0/0:14,0:13:18.06:0,18,1338	0/0:8,0:9:15.05:0,15,803	0/0:20,0:20:33.08:0,33,1712	1/1:21,0:21:3:27,3,0	0/0:22,0:23:30.08:0,30,991	0/0:10,0:9:6.01:0,6,286	0/0:11,0:11:15.05:0,15,892	0/0:24,0:25:33.11:0,33,2275	0/0:13,0:13:18.03:0,18,711	0/0:14,0:14:18.04:0,18,951	0/0:19,0:18:15.05:0,15,1190	0/0:16,0:21:18.06:0,18,654	0/0:19,0:19:18.06:0,18,863	0/0:11,0:11:5.98:0,6,71	1/1:9,4:13:12.04:282,12,0	1/1:3,3:6:8.98:102,9,0	1/1:30,0:29:20.97:270,21,0	0/0:14,0:14:12.04:0,12,866	0/0:6,0:6:6.01:0,6,191	0/0:17,0:22:21.06:0,21,484	0/0:14,0:14:21.04:0,21,803	0/0:12,0:12:15.05:0,15,941	0/1:12,0:11:69.48:121,0,69	0/0:1,0:1:3.01:0,3,232
chr10	106671832	.	T	TTCTC	10831.18	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-10.365;DP=727;FS=4.587;HRun=0;HaplotypeScore=114.1039;InbreedingCoeff=0.9983;MQ=82.95;MQ0=0;MQRankSum=-10.311;QD=63.71;ReadPosRankSum=-2.192;VQSLOD=6.4600;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,2514	1/1:0,6:8:18.06:493,18,0	0/0:20,0:20:51.07:0,51,912	0/0:22,0:22:63.15:0,63,1126	0/0:26,0:26:72.24:0,72,1339	0/0:16,0:16:45.14:0,45,839	0/0:24,0:24:66.23:0,66,1266	1/1:5,21:37:99:2523,111,0	1/1:1,28:29:75.26:2027,75,0	0/0:25,0:25:72.25:0,72,1395	0/0:20,0:20:54.18:0,54,1020	0/0:38,0:38:99:0,108,1950	0/0:26,0:26:78.27:0,78,1483	0/0:26,0:26:75.23:0,75,1368	0/0:40,0:40:99:0,111,2120	0/0:37,0:37:99:0,111,2022	0/0:27,0:27:78.23:0,78,1412	0/0:38,0:37:99:0,111,2088	1/1:2,14:19:57.20:1437,57,0	1/1:3,14:18:39.13:976,39,0	1/1:2,26:31:72.25:1695,72,0	0/0:16,0:16:48.15:0,48,896	0/0:21,0:21:57.20:0,57,1078	0/0:29,0:29:81.27:0,81,1525	0/0:22,0:22:63.22:0,63,1221	0/0:30,0:30:84.28:0,84,1582	1/1:1,24:28:63.22:1681,63,0	0/0:9,0:9:27.09:0,27,523
chr10	106672289	.	TG	T	6325.09	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=16.278;DP=782;FS=29.673;HRun=2;HaplotypeScore=90.0920;InbreedingCoeff=0.9999;MQ=87.82;MQ0=0;MQRankSum=-3.196;QD=36.56;ReadPosRankSum=0.820;VQSLOD=2.6759;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1721	1/1:0,12:12:30.10:389,30,0	0/0:25,0:25:71.45:0,71,996	0/0:35,0:34:73.20:0,73,934	0/0:22,0:22:63.21:0,63,938	0/0:18,0:18:54.18:0,54,793	0/0:29,0:29:87.29:0,87,1287	1/1:0,33:33:99:1227,99,0	0/0:29,0:29:87.28:0,87,1274	0/0:36,0:36:99:0,102,1518	0/0:18,0:18:54.14:0,54,779	0/0:42,0:42:99:0,126,1820	0/0:29,0:29:87.29:0,87,1295	0/0:26,0:26:78.23:0,78,1117	0/0:27,0:27:81.27:0,81,1208	0/0:31,0:31:93.31:0,93,1380	0/0:27,0:27:81.27:0,81,1209	0/0:20,0:20:60.20:0,60,899	1/1:1,14:15:42.14:544,42,0	1/1:0,18:18:54.18:701,54,0	1/1:0,63:63:99:2335,181,0	0/0:32,0:32:93.30:0,93,1374	0/0:19,0:19:57.19:0,57,839	0/0:27,0:27:81.25:0,81,1176	0/0:23,0:23:63.21:0,63,939	0/0:26,0:26:75.25:0,75,1124	1/1:1,31:32:87.28:1129,87,0	0/0:28,0:28:84.27:0,84,1228
chr10	106672680	.	TAGAAC	T	6307.51	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.915;DP=728;FS=1.267;HRun=0;HaplotypeScore=137.8321;InbreedingCoeff=0.9986;MQ=84.46;MQ0=0;MQRankSum=-4.098;QD=46.04;ReadPosRankSum=0.489;VQSLOD=4.7916;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,169,5217	1/1:1,10:11:21.05:413,21,0	0/0:25,0:25:62.02:0,62,1741	0/0:23,0:23:56.86:0,57,1602	0/0:19,0:19:57.20:0,57,1808	0/0:31,0:31:93.32:0,93,2951	0/0:29,0:29:84.29:0,84,2600	1/1:7,25:32:69.17:1293,69,0	0/0:14,0:14:39.13:0,39,1214	0/0:27,0:27:75.26:0,75,2333	0/0:16,0:16:48.16:0,48,1444	0/0:26,0:26:78.25:0,78,2405	0/0:27,0:27:81.28:0,81,2544	0/0:26,0:26:72.23:0,72,2174	0/0:24,0:24:66.23:0,66,2050	0/0:20,0:20:60.19:0,60,1830	0/0:39,0:39:99:0,114,3615	0/0:45,0:45:99:0,129,4089	1/1:4,15:19:45.13:890,45,0	1/1:2,14:16:30.10:651,30,0	1/1:3,34:37:81.21:1757,81,0	0/0:22,0:22:63.19:0,63,1845	0/0:9,0:9:24.08:0,24,762	0/0:27,0:27:78.27:0,78,2474	0/0:31,0:31:84.29:0,84,2662	0/0:32,0:31:87.30:0,87,2652	1/1:2,20:22:60.21:1302,60,0	0/0:22,0:22:57.20:0,57,1780
chr10	106674216	.	A	AT	1234.48	PASS	AB=0.828;AC=14;AF=0.250;AN=56;BaseQRankSum=-3.889;DP=593;FS=5.949;HRun=12;HaplotypeScore=64.9151;InbreedingCoeff=0.5856;MQ=69.12;MQ0=2;MQRankSum=0.910;QD=6.97;ReadPosRankSum=-1.986;VQSLOD=1.7460;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:46,5:51:28.73:0,29,699	1/1:4,5:11:5.35:153,5,0	0/1:20,1:18:4.41:4,0,87	0/0:8,0:8:4.30:0,4,42	0/0:14,0:15:37.80:0,38,267	0/0:19,1:20:15.50:0,15,277	0/0:27,0:27:25.67:0,26,320	1/1:13,15:32:37.61:469,38,0	0/0:12,0:12:23.79:0,24,175	0/0:29,2:31:10.22:0,10,393	0/0:24,0:24:50.58:0,51,366	0/0:19,0:20:43.29:0,43,299	0/1:22,4:26:7.77:8,0,272	0/0:18,0:18:41.68:0,42,304	0/0:19,0:19:38.73:0,39,282	0/0:16,0:15:35.78:0,36,262	0/0:27,1:30:39.36:0,39,431	0/0:17,2:19:18.55:0,19,299	1/1:8,12:22:19.76:305,20,0	1/1:7,13:20:10.95:231,11,0	0/1:3,5:8:9.85:76,0,10	0/0:29,1:31:47.27:0,47,493	0/1:18,3:20:16.67:17,0,221	0/0:18,1:20:14.59:0,15,261	0/0:21,0:22:49.49:0,49,353	0/0:17,0:17:12.42:0,12,210	1/1:4,10:15:15.02:146,15,0	0/0:14,0:15:37.66:0,38,261
chr10	106674398	.	A	AGT	520.78	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=-2.282;DP=611;FS=2.601;HRun=0;HaplotypeScore=94.1471;InbreedingCoeff=0.5507;MQ=59.13;MQ0=10;MQRankSum=2.508;QD=3.72;ReadPosRankSum=-0.871;VQSLOD=2.1129;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:30:65.47:0,65,685	0/0:6,0:6:5.96:0,6,43	./.	0/1:15,0:8:0:0,0,0	0/0:14,0:14:26.96:0,27,276	0/0:22,0:24:38.86:0,39,390	0/0:26,0:27:50.89:0,51,519	0/1:26,0:25:15.37:15,0,33	1/1:5,0:12:2.52:12,3,0	1/1:6,15:21:16.66:361,17,0	1/1:9,8:17:14.62:232,15,0	0/0:14,0:15:26.83:0,27,261	0/0:25,1:26:7.63:0,8,479	0/0:20,0:20:35.24:0,35,338	0/0:16,0:16:30.03:0,30,319	0/0:14,0:14:4.09:0,4,232	0/0:52,0:52:99:0,120,1173	0/0:30,2:33:19.44:0,19,614	0/0:24,0:23:31.33:0,31,178	0/1:11,0:11:9.10:15,0,9	1/1:38,0:38:3:28,3,0	0/0:22,0:22:53.82:0,54,533	0/0:13,0:14:32.90:0,33,338	0/0:29,0:29:68.98:0,69,710	0/0:25,0:26:38.99:0,39,396	0/0:24,0:26:47.56:0,48,426	0/0:21,0:21:0.66:0,1,75	0/0:7,0:7:17.54:0,18,134
chr10	106674422	.	TGTGC	T	1313.91	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=7.854;DP=549;FS=6.574;HRun=0;HaplotypeScore=107.1874;InbreedingCoeff=0.8794;MQ=57.33;MQ0=6;MQRankSum=-3.469;QD=12.28;ReadPosRankSum=-2.330;VQSLOD=1.9306;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:98.88:0,99,1828	1/1:2,0:2:5.95:43,6,0	1/1:4,0:1:2.04:6,2,0	./.	0/0:15,0:15:22.18:0,22,699	0/0:24,0:24:62.87:0,63,1068	0/0:27,0:26:72:0,72,1444	1/1:5,15:22:46.93:470,47,0	0/0:13,0:13:14.71:0,15,124	0/0:20,0:20:54.54:0,55,777	0/0:9,0:9:17.54:0,18,339	0/0:17,0:17:44.25:0,44,689	0/0:29,0:29:73.61:0,74,1287	0/0:21,0:21:42.28:0,42,687	0/0:10,0:10:30.08:0,30,688	0/0:13,0:13:36.03:0,36,710	0/0:53,0:53:99:0,135,2711	0/0:30,0:30:86.90:0,87,1696	1/1:14,4:17:41.65:495,42,0	1/1:0,12:12:6.02:115,6,0	1/1:4,25:30:2.87:34,3,0	0/0:22,0:21:16.04:0,16,1098	0/0:15,0:15:38.92:0,39,785	0/0:34,0:34:96.14:0,96,1926	0/0:20,0:20:26.34:0,26,825	0/0:20,0:20:56.79:0,57,973	1/1:5,12:17:21.02:321,21,0	0/0:9,0:9:26.99:0,27,384
chr10	106675438	.	TAGTAGCACAC	T	6175.94	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.239;DP=639;FS=0.000;HRun=0;HaplotypeScore=191.0259;InbreedingCoeff=0.9949;MQ=75.25;MQ0=0;MQRankSum=-11.385;QD=64.33;ReadPosRankSum=-2.046;VQSLOD=4.1934;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:99:0,111,6030	1/1:0,8:8:24.08:831,24,0	0/0:20,0:19:54.15:0,54,2270	0/0:16,0:16:48.13:0,48,2050	0/0:17,0:17:51.16:0,51,2562	0/0:18,0:18:51.18:0,51,2684	0/0:31,0:31:93.32:0,93,4878	1/1:0,18:18:54.17:1721,54,0	0/0:19,0:19:57.20:0,57,2966	0/0:36,0:36:99:0,105,5523	0/0:23,0:23:66.23:0,66,3419	0/0:34,0:34:99:0,102,5226	0/0:22,0:22:66.23:0,66,3442	0/0:20,0:20:60.21:0,60,3141	0/0:17,0:17:51.16:0,51,2576	0/0:21,0:21:63.22:0,63,3359	0/0:38,0:38:99:0,114,5820	0/0:21,0:21:63.22:0,63,3297	1/1:0,17:17:51.15:1547,51,0	1/1:0,15:15:21.07:658,21,0	1/1:0,22:22:14.51:477,15,0	0/0:23,0:23:66.23:0,66,3593	0/0:25,0:25:75.24:0,75,3832	0/0:33,0:33:99:0,99,5301	0/0:22,0:22:66.23:0,66,3610	0/0:29,0:29:87.29:0,87,4263	1/1:0,16:16:27.09:942,27,0	0/0:20,0:20:60.21:0,60,3084
chr10	106676238	.	A	ACCCCC	1440.60	PASS	AB=0.886;AC=10;AF=0.185;AN=54;BaseQRankSum=6.543;DP=475;FS=18.437;HRun=0;HaplotypeScore=74.3494;InbreedingCoeff=0.5757;MQ=50.44;MQ0=50;MQRankSum=-6.615;QD=10.75;ReadPosRankSum=-0.927;VQSLOD=0.8243;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:66.18:0,66,1341	./.	0/1:82,0:9:14.37:14,0,156	0/0:80,0:21:24.63:0,25,521	0/0:12,0:12:34:0,34,673	0/0:18,0:17:48.16:0,48,1013	0/0:6,0:5:15.05:0,15,310	0/1:12,4:15:11.49:672,0,11	0/0:5,0:4:9.03:0,9,140	0/0:13,0:11:33.11:0,33,725	0/0:11,0:11:30.10:0,30,649	0/0:8,0:8:24.08:0,24,507	0/0:4,0:4:12.04:0,12,253	0/0:8,0:8:24.05:0,24,432	0/0:8,0:7:18.06:0,18,379	0/0:5,0:4:9.03:0,9,202	0/0:32,0:29:64.35:0,64,1419	0/0:19,0:18:48.16:0,48,1045	1/1:16,5:16:36.09:631,36,0	1/1:2,0:1:3.01:37,3,0	1/1:3,0:3:2.85:67,3,0	0/0:2,0:1:3.01:0,3,69	0/0:5,0:5:15.05:0,15,286	0/0:8,0:8:21.07:0,21,451	0/0:8,0:7:18.06:0,18,372	0/0:24,0:19:54.66:0,55,1149	1/1:3,3:5:7.84:164,8,0	0/0:42,0:28:48.16:0,48,977
chr10	106678995	.	CAG	C	3602.49	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.531;DP=539;FS=9.171;HRun=0;HaplotypeScore=70.1874;InbreedingCoeff=0.9957;MQ=78.34;MQ0=0;MQRankSum=-3.151;QD=31.88;ReadPosRankSum=-2.763;VQSLOD=4.0818;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:99:0,111,1945	1/1:2,6:8:18.06:247,18,0	0/0:23,0:21:48.16:0,48,810	0/0:28,0:27:57.60:0,58,1123	0/0:23,0:23:63.20:0,63,1089	0/0:15,0:15:42.14:0,42,745	0/0:15,0:15:42.14:0,42,737	1/1:5,13:18:39.13:533,39,0	0/0:22,0:22:54.19:0,54,958	0/0:21,0:21:60.20:0,60,1040	0/0:15,0:15:45.15:0,45,798	0/0:22,0:22:57.20:0,57,1010	0/0:13,0:13:33.11:0,33,586	0/0:16,0:16:45.14:0,45,769	0/0:22,0:22:63.22:0,63,1113	0/0:18,0:18:48.15:0,48,823	0/0:27,0:27:75.26:0,75,1318	0/0:17,0:17:48.16:0,48,852	1/1:6,9:15:33.10:436,33,0	1/1:1,8:9:21.07:288,21,0	1/1:12,23:35:87.24:1170,87,0	0/0:9,0:9:21.07:0,21,373	0/0:10,0:10:21.07:0,21,373	0/0:22,0:22:63.19:0,63,1075	0/0:13,0:13:36.10:0,36,583	0/0:23,0:23:60.21:0,60,1065	1/1:7,21:27:69.21:928,69,0	0/0:12,0:12:33.11:0,33,585
chr10	106679048	.	TTAA	T	4698.41	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.765;DP=484;FS=1.893;HRun=0;HaplotypeScore=74.4176;InbreedingCoeff=0.9764;MQ=90.90;MQ0=0;MQRankSum=-8.835;QD=41.58;ReadPosRankSum=-0.921;VQSLOD=5.6400;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:99:0,102,2270	1/1:0,7:7:21.07:341,21,0	0/0:22,0:22:60.17:0,60,1267	0/0:19,0:19:54.19:0,54,1185	0/0:9,0:9:24.08:0,24,536	0/0:14,0:14:42.14:0,42,938	0/0:29,0:29:84.29:0,84,1861	1/1:4,20:24:60.20:979,60,0	1/1:0,22:22:60.20:980,60,0	0/0:14,0:14:36.12:0,36,804	0/0:8,0:8:24.08:0,24,535	0/0:25,0:25:75.26:0,75,1676	0/0:13,0:13:33.11:0,33,729	0/0:21,0:21:63.22:0,63,1387	0/0:18,0:18:54.19:0,54,1197	0/0:25,0:25:72.25:0,72,1609	0/0:25,0:25:72.25:0,72,1600	0/0:15,0:15:36.12:0,36,796	1/1:2,15:17:45.15:735,45,0	1/1:0,5:5:12:167,12,0	1/1:2,19:21:57.15:889,57,0	0/0:3,0:3:9.03:0,9,200	0/0:9,0:9:27.09:0,27,603	0/0:30,0:30:84.29:0,84,1869	0/0:6,0:6:12.04:0,12,268	0/0:18,0:18:51.18:0,51,1139	1/1:2,15:17:39.09:607,39,0	0/0:13,0:13:30.10:0,30,670
chr10	106679355	.	AAGG	A	267.54	PASS	AB=1.000;AC=7;AF=0.140;AN=50;BaseQRankSum=2.901;DP=332;FS=7.131;HRun=0;HaplotypeScore=47.2081;InbreedingCoeff=0.6836;MQ=71.96;MQ0=10;MQRankSum=-1.925;QD=6.53;ReadPosRankSum=1.841;VQSLOD=0.7027;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:44.90:0,45,566	./.	0/0:40,0:16:35.81:0,36,388	0/0:34,0:12:7.62:0,8,158	0/0:9,0:9:15.43:0,15,164	0/0:13,0:12:27.02:0,27,341	0/0:15,0:15:45.07:0,45,661	1/1:8,0:8:8.77:44,9,0	1/1:1,12:14:24.07:332,24,0	0/0:5,0:5:12.38:0,12,134	0/0:6,0:6:14.97:0,15,146	0/0:13,0:13:29.92:0,30,380	0/0:8,0:8:17.96:0,18,208	0/0:7,0:7:12.01:0,12,155	0/0:6,0:6:14.80:0,15,196	0/0:6,1:7:15.05:0,15,265	0/0:26,0:26:66.04:0,66,882	0/0:21,0:21:60.91:0,61,880	1/1:3,0:2:2.37:8,2,0	0/0:2,0:1:0.47:0,0,1	./.	./.	0/0:4,0:4:6.46:0,6,50	0/0:17,0:17:44.98:0,45,671	0/0:5,0:5:12.02:0,12,164	0/0:16,0:16:27.48:0,27,446	0/1:16,0:15:0.50:1,0,140	0/0:6,0:6:12.02:0,12,175
chr10	106679542	.	T	TA	508.36	PASS	AB=0.776;AC=14;AF=0.259;AN=54;BaseQRankSum=-2.875;DP=241;FS=0.752;HRun=14;HaplotypeScore=28.1679;InbreedingCoeff=0.2259;MQ=60.89;MQ0=3;MQRankSum=-2.370;QD=6.12;ReadPosRankSum=-0.930;VQSLOD=0.6825;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:21:22.59:0,23,138	1/1:2,0:4:5.83:37,6,0	0/0:13,0:6:10.49:0,10,54	0/0:12,0:4:1.80:0,2,22	0/0:3,0:3:2.91:0,3,19	0/0:6,0:6:8.84:0,9,58	0/0:4,0:4:8.85:0,9,58	0/1:14,14:27:44.29:239,0,44	0/1:1,0:2:0:0,0,0	0/0:8,0:9:10.76:0,11,55	0/1:7,1:8:8.59:9,0,78	0/0:5,0:5:2.62:0,3,12	0/0:3,0:3:5.91:0,6,38	0/0:2,0:2:2.90:0,3,17	0/0:8,0:8:17.67:0,18,113	./.	0/0:19,3:22:23.87:0,24,279	0/0:22,0:26:37.25:0,37,229	0/1:3,3:6:0.60:55,0,1	1/1:0,4:4:9:79,9,0	0/1:3,2:5:2.59:44,0,3	0/0:2,0:2:2.96:0,3,19	0/1:1,1:2:13.27:20,0,13	0/1:4,2:6:14.51:15,0,44	0/0:6,0:6:14.73:0,15,93	0/0:11,0:14:23.29:0,23,131	1/1:2,7:9:17.90:148,18,0	0/1:7,1:8:11.58:12,0,62
chr10	106679674	.	AG	A	522.25	PASS	AB=0.938;AC=14;AF=0.250;AN=56;BaseQRankSum=2.464;DP=284;FS=0.000;HRun=1;HaplotypeScore=44.0687;InbreedingCoeff=0.6084;MQ=68.90;MQ0=4;MQRankSum=-1.841;QD=10.24;ReadPosRankSum=-2.699;VQSLOD=0.2965;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:28.96:0,29,347	1/1:1,0:1:2.99:24,3,0	0/0:31,0:15:28.45:0,28,293	0/0:41,0:12:1.29:0,1,131	0/0:14,0:14:23.23:0,23,407	0/0:10,0:9:14.79:0,15,186	0/0:7,0:7:21.05:0,21,269	1/1:11,2:13:27.32:228,27,0	0/0:2,0:2:0.41:0,0,1	0/0:11,0:11:26.27:0,26,282	0/0:7,0:7:21.04:0,21,263	0/0:5,0:5:9:0,9,122	0/0:3,0:3:8.99:0,9,75	0/0:5,0:5:12.03:0,12,146	0/1:6,1:7:7.79:8,0,189	0/0:1,0:1:3.01:0,3,40	0/0:26,0:26:56.57:0,57,756	0/0:17,0:17:42.01:0,42,476	1/1:3,2:4:8.99:75,9,0	1/1:6,2:8:20.44:162,20,0	1/1:4,2:6:8.98:78,9,0	0/0:1,0:1:3:0,3,25	0/0:1,0:1:3.01:0,3,41	0/0:10,0:10:17.94:0,18,174	0/0:12,0:12:33.06:0,33,417	0/0:14,0:14:33.06:0,33,416	1/1:4,1:5:12:108,12,0	0/1:6,0:6:7.55:8,0,148
chr10	106679680	.	AAAAAAGAAAAG	A	345.09	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=6.306;DP=321;FS=4.855;HRun=0;HaplotypeScore=99.7188;InbreedingCoeff=0.7739;MQ=64.95;MQ0=7;MQRankSum=-2.725;QD=9.86;ReadPosRankSum=-1.421;VQSLOD=0.9334;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:33.07:0,33,1249	1/1:1,0:1:2.68:11,3,0	0/0:31,0:12:20.58:0,21,182	0/0:48,0:11:9.96:0,10,273	0/0:18,0:18:39:0,39,1260	0/0:8,0:7:15.05:0,15,443	0/0:9,0:9:27.02:0,27,650	1/1:2,12:14:34.72:240,35,0	1/1:2,0:2:5.67:29,6,0	0/0:13,0:12:36.12:0,36,1458	0/0:11,0:11:29.66:0,30,786	0/0:5,0:5:14.98:0,15,581	0/0:2,0:2:2.98:0,3,98	0/0:4,0:4:9:0,9,91	0/0:6,0:6:9.16:0,9,289	0/0:2,0:2:6.02:0,6,127	0/0:29,0:29:75.08:0,75,2425	0/0:23,0:22:57.08:0,57,1927	1/1:3,0:3:4.35:30,4,0	1/1:6,0:6:14.20:86,14,0	1/1:5,0:5:7.05:35,7,0	./.	0/0:3,0:3:6.02:0,6,187	0/0:11,0:11:19.62:0,20,598	0/0:18,0:18:48.11:0,48,1643	0/0:22,0:20:60.19:0,60,1990	1/1:4,0:4:11.82:82,12,0	0/0:9,0:8:7.69:0,8,478
chr10	106679684	.	AAG	A	289.04	PASS	AB=0.990;AC=18;AF=0.333;AN=54;BaseQRankSum=5.909;DP=334;FS=0.000;HRun=0;HaplotypeScore=56.8481;InbreedingCoeff=0.6116;MQ=63.80;MQ0=7;MQRankSum=-2.139;QD=2.95;ReadPosRankSum=-1.159;VQSLOD=1.5992;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:31.83:0,32,358	1/1:2,0:2:2.55:25,3,0	0/0:33,0:13:17.26:0,17,189	0/1:50,1:11:19.35:19,0,129	0/0:17,0:17:33.49:0,33,438	0/1:9,0:8:2.74:3,0,179	0/0:9,0:9:24.65:0,25,305	1/1:12,2:14:6.85:46,7,0	1/1:2,0:2:5.65:31,6,0	0/0:14,0:13:37.81:0,38,445	0/0:13,0:13:35.77:0,36,366	0/0:5,0:5:14.90:0,15,171	1/1:1,0:1:0.47:1,0,0	0/0:5,0:5:11.96:0,12,135	0/0:5,0:5:1.53:0,2,167	0/0:2,0:2:5.38:0,5,55	0/0:29,0:28:71.65:0,72,865	0/0:24,0:23:19.82:0,20,507	1/1:1,2:3:5.99:51,6,0	1/1:6,1:7:14.39:133,14,0	1/1:3,2:5:7.99:55,8,0	./.	0/0:3,0:3:5.95:0,6,67	0/0:10,0:10:14.58:0,15,170	0/0:17,0:17:41.42:0,41,529	0/0:22,0:20:3.39:0,3,549	1/1:4,0:4:11.86:90,12,0	0/0:14,0:13:13.31:0,13,299
chr10	106679855	.	G	GA	2124.33	PASS	AB=0.822;AC=13;AF=0.232;AN=56;BaseQRankSum=-7.582;DP=450;FS=1.591;HRun=10;HaplotypeScore=47.6732;InbreedingCoeff=0.6608;MQ=61.69;MQ0=9;MQRankSum=-0.207;QD=16.99;ReadPosRankSum=-4.008;VQSLOD=2.6169;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:83.85:0,84,689	1/1:1,8:9:18.05:192,18,0	0/0:5,0:3:5.96:0,6,46	0/0:7,0:5:0.74:0,1,25	0/0:10,0:9:26.97:0,27,222	0/0:7,0:7:17.96:0,18,147	0/0:16,0:16:35.93:0,36,296	1/1:6,26:31:52.95:733,53,0	0/0:8,0:8:14.97:0,15,123	0/0:16,1:17:12.89:0,13,305	0/0:10,0:10:29.93:0,30,241	0/0:20,0:20:50.93:0,51,419	0/0:10,0:10:17.96:0,18,147	0/1:6,0:6:8.23:8,0,83	0/0:12,0:12:29.97:0,30,246	0/1:8,1:8:14.01:14,0,105	0/0:40,0:37:83.80:0,84,678	0/0:36,0:36:74.90:0,75,616	1/1:7,18:24:32.46:538,32,0	1/1:1,7:8:18.05:192,18,0	0/1:4,13:16:7.18:342,0,7	0/0:7,0:7:20.97:0,21,172	0/0:9,0:9:16.02:0,16,186	0/0:20,1:21:18.93:0,19,358	0/0:17,0:17:35.84:0,36,296	0/0:19,0:18:50.93:0,51,417	1/1:8,11:16:27.06:284,27,0	0/0:15,0:14:32.90:0,33,266
chr10	106681975	.	C	CA	1992.88	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.276;DP=754;FS=0.857;HRun=3;HaplotypeScore=107.6295;InbreedingCoeff=0.9500;MQ=79.56;MQ0=0;MQRankSum=-13.214;QD=17.64;ReadPosRankSum=-1.241;VQSLOD=2.9484;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1480	1/1:2,9:11:9.26:235,9,0	0/0:26,0:26:72.11:0,72,909	0/0:27,0:27:76.43:0,76,997	0/0:34,0:34:99:0,102,1399	0/0:35,0:35:99:0,105,1432	0/0:28,0:28:81.27:0,81,1133	1/1:11,8:19:32.68:341,33,0	0/0:33,0:33:99:0,99,1366	0/0:35,0:35:99:0,105,1449	0/0:26,0:26:75.24:0,75,1031	0/0:25,0:25:75.24:0,75,1033	0/0:28,0:28:84.26:0,84,1150	0/0:31,0:31:93.30:0,93,1281	0/0:46,0:46:99:0,135,1852	0/0:44,0:44:99:0,126,1709	0/0:20,0:20:60.09:0,60,759	0/0:20,0:20:57.16:0,57,763	1/1:12,11:23:42.81:407,43,0	1/1:4,11:15:39.21:311,39,0	1/1:6,5:11:2.80:133,3,0	0/0:41,0:41:99:0,120,1648	0/0:26,0:26:69.02:0,69,935	0/0:27,0:27:78.26:0,78,1090	0/0:23,0:23:69.18:0,69,940	0/0:22,0:22:66.21:0,66,909	1/1:9,25:34:92.86:745,93,0	0/0:7,0:7:21.07:0,21,292
chr10	106681976	.	T	TTGCTCA	7918.52	PASS	AB=0.571;AC=11;AF=0.196;AN=56;BaseQRankSum=16.038;DP=773;FS=1.686;HRun=0;HaplotypeScore=187.2674;InbreedingCoeff=0.8720;MQ=78.14;MQ0=0;MQRankSum=-15.557;QD=58.22;ReadPosRankSum=-1.256;VQSLOD=4.9350;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,2568	0/1:3,9:12:19.94:756,0,20	0/0:27,0:27:69.22:0,69,1517	0/0:26,0:26:75.14:0,75,1555	0/0:34,0:34:99:0,102,2434	0/0:35,0:35:99:0,105,2488	0/0:28,0:28:84.28:0,84,1994	1/1:20,8:28:36.48:1628,36,0	0/0:32,0:32:96.33:0,96,2317	0/0:34,0:34:99:0,102,2407	0/0:26,0:26:75.25:0,75,1777	0/0:25,0:25:72.25:0,72,1723	0/0:28,0:28:84.27:0,84,2017	0/0:31,0:31:90.31:0,90,2142	0/0:47,0:47:99:0,132,3196	0/0:43,0:43:99:0,123,2844	0/0:18,0:18:54.13:0,54,1201	0/0:20,0:20:54.16:0,54,1251	1/1:14,11:25:43.02:1262,43,0	1/1:10,11:21:8.62:1326,9,0	1/1:8,5:13:24:647,24,0	0/0:41,0:41:99:0,120,2843	0/0:26,0:26:54.68:0,55,1605	0/0:27,0:27:81.26:0,81,1918	0/0:23,0:23:66.23:0,66,1516	0/0:22,0:22:63.22:0,63,1551	1/1:12,25:37:58.54:2300,59,0	0/0:7,0:7:21.07:0,21,494
chr10	106682010	.	GAATC	G	1798.67	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.012;DP=700;FS=0.000;HRun=0;HaplotypeScore=135.8654;InbreedingCoeff=0.9953;MQ=56.23;MQ0=4;MQRankSum=-10.096;QD=21.67;ReadPosRankSum=-0.870;VQSLOD=3.3306;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.27:0,84,1847	1/1:6,1:7:20.81:195,21,0	0/0:27,0:21:53.43:0,53,868	0/0:22,0:17:35.29:0,35,803	0/0:43,0:43:99:0,120,2729	0/0:35,0:35:87.30:0,87,2085	0/0:25,0:25:69.22:0,69,1622	1/1:17,0:16:27.04:384,27,0	0/0:34,0:34:96.30:0,96,2197	0/0:35,0:35:93.31:0,93,2155	0/0:18,0:18:51.18:0,51,1263	0/0:26,0:26:75.24:0,75,1777	0/0:26,0:26:75.21:0,75,1637	0/0:26,0:26:66.23:0,66,1618	0/0:39,0:39:99:0,105,2359	0/0:33,0:33:84.24:0,84,1936	0/0:21,0:21:60.19:0,60,1358	0/0:15,0:15:42.09:0,42,848	1/1:12,1:12:26.24:259,26,0	1/1:10,7:17:44.71:427,45,0	1/1:6,0:6:14.98:162,15,0	0/0:45,0:45:99:0,120,2775	0/0:25,0:25:69.22:0,69,1449	0/0:18,0:18:51.15:0,51,1086	0/0:24,0:24:66.23:0,66,1639	0/0:32,0:32:87.29:0,87,2068	1/1:20,3:23:54.68:558,55,0	0/0:16,0:16:48.16:0,48,1174
chr10	106682026	.	CAATCAATGAATCAATG	C	1638.02	PASS	AB=0.976;AC=9;AF=0.161;AN=56;BaseQRankSum=10.450;DP=703;FS=8.896;HRun=0;HaplotypeScore=308.3725;InbreedingCoeff=0.6499;MQ=57.70;MQ0=1;MQRankSum=-6.806;QD=17.06;ReadPosRankSum=-3.043;VQSLOD=0.7422;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:66.17:0,66,3116	1/1:8,1:9:9.78:215,10,0	0/0:30,0:21:60.01:0,60,1207	0/0:26,0:21:59.91:0,60,1202	0/0:42,0:42:99:0,123,5968	0/0:29,0:29:78.23:0,78,4227	0/0:25,0:25:63.19:0,63,2429	0/1:13,0:12:72.41:72,0,185	0/0:31,0:31:81.26:0,81,3887	0/0:32,0:32:81.27:0,81,3948	0/0:20,0:20:57.14:0,57,2688	0/0:31,0:31:93.25:0,93,3971	0/0:26,0:26:63.20:0,63,2805	0/0:25,0:25:72.21:0,72,3662	0/0:36,0:36:99:0,99,5472	0/0:29,0:29:76.28:0,76,3703	0/0:26,0:26:69.24:0,69,3410	0/0:16,0:16:39.13:0,39,1770	0/1:12,1:13:37.85:188,0,38	1/1:13,7:20:28:833,28,0	0/1:11,0:11:1.62:24,0,2	0/0:38,0:38:99:0,108,5579	0/0:27,0:27:73.46:0,73,3075	0/0:16,0:16:48.12:0,48,1853	0/0:27,0:27:75.15:0,75,3556	0/0:32,0:32:96.32:0,96,4676	1/1:27,3:30:16.04:459,16,0	0/0:16,0:16:42.14:0,42,2428
chr10	106682042	.	G	GAATC	4224.10	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-3.943;DP=694;FS=10.518;HRun=0;HaplotypeScore=111.8893;InbreedingCoeff=0.9644;MQ=64.37;MQ0=0;MQRankSum=-1.483;QD=32.49;ReadPosRankSum=-1.996;VQSLOD=4.1281;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:57.19:0,57,956	1/1:1,5:6:15.05:299,15,0	0/0:31,0:27:54.11:0,54,818	0/0:27,0:24:51.13:0,51,760	0/0:44,0:44:99:0,105,1724	0/0:28,0:28:63.21:0,63,1045	0/0:23,0:23:57.17:0,57,902	1/1:7,13:20:39.11:744,39,0	0/0:29,0:29:60.20:0,60,988	0/0:27,0:27:66.23:0,66,1099	0/0:22,0:22:57.15:0,57,865	0/0:30,0:30:72.23:0,72,1183	0/0:21,0:21:45.15:0,45,755	0/0:24,0:24:57.19:0,57,950	0/0:42,0:42:84.26:0,84,1351	1/1:14,18:34:36.12:872,36,0	0/0:24,0:25:60.13:0,60,901	0/0:16,0:16:44.34:0,44,670	1/1:3,7:11:27.05:497,27,0	1/1:8,11:19:49.50:968,50,0	1/1:0,15:15:3.01:74,3,0	0/0:37,0:37:87.17:0,87,1387	0/0:26,0:26:66.21:0,66,1078	0/0:17,0:17:42.13:0,42,675	0/0:24,0:24:63.19:0,63,1006	0/0:33,0:33:81.28:0,81,1355	1/1:3,17:24:33.11:769,33,0	0/0:14,0:14:36.12:0,36,604
chr10	106682594	.	TCA	T	200.33	PASS	AB=0.906;AC=12;AF=0.214;AN=56;BaseQRankSum=4.395;DP=734;FS=3.252;HRun=0;HaplotypeScore=138.6494;InbreedingCoeff=-0.1076;MQ=67.75;MQ0=14;MQRankSum=0.199;QD=0.73;ReadPosRankSum=1.507;VQSLOD=2.2881;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,2:41:22.66:0,23,727	0/0:7,0:10:1.55:0,2,4	0/0:56,0:35:11.93:0,12,108	0/0:50,0:37:5.98:0,6,55	0/0:12,0:12:21.07:0,21,306	0/0:20,4:24:14.06:0,14,606	0/1:36,3:40:57.58:58,0,621	0/0:23,0:22:11.37:0,11,67	1/1:6,0:23:8.52:42,9,0	0/0:18,0:19:12.52:0,13,300	0/1:10,1:11:49.94:50,0,166	0/0:29,6:35:26.15:0,26,832	0/0:21,1:22:11.03:0,11,581	0/1:27,3:30:79.04:79,0,629	0/0:24,1:25:14.09:0,14,636	0/0:21,1:23:2.97:0,3,632	0/1:34,3:38:35.94:36,0,785	0/1:14,1:16:8.79:9,0,293	0/1:18,0:21:22.16:22,0,43	0/0:13,0:19:2.34:0,2,7	0/0:43,0:40:2.98:0,3,21	0/1:22,1:24:12.15:12,0,374	0/0:6,0:6:6.02:0,6,92	0/1:37,3:40:17.89:18,0,1041	0/0:8,0:19:27.02:0,27,273	0/0:30,1:31:10.07:0,10,510	0/1:12,0:16:1.02:1,0,28	0/1:12,1:13:16.08:16,0,183
chr10	106682630	.	G	GCA	2691.53	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-3.902;DP=813;FS=12.650;HRun=0;HaplotypeScore=140.4451;InbreedingCoeff=0.9538;MQ=50.62;MQ0=21;MQRankSum=-6.893;QD=17.36;ReadPosRankSum=-7.005;VQSLOD=0.8039;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:97.43:0,97,1137	1/1:3,9:12:6.73:51,7,0	0/0:51,0:14:35.32:0,35,414	0/0:69,0:17:35.18:0,35,377	0/0:13,0:12:28.13:0,28,293	0/0:29,0:29:65.90:0,66,758	0/0:39,0:39:73.82:0,74,889	1/1:3,27:31:81.10:1131,81,0	0/0:26,0:26:30.09:0,30,358	0/0:22,0:22:57.03:0,57,652	0/0:15,0:15:30.08:0,30,362	0/0:41,0:41:94.24:0,94,1057	0/0:29,0:29:68.91:0,69,788	0/0:31,0:31:71.71:0,72,773	0/0:31,0:30:69.16:0,69,827	0/0:24,0:23:57.17:0,57,698	0/0:43,0:44:99:0,102,1187	0/0:22,0:22:59.92:0,60,721	1/1:16,11:26:54.94:720,55,0	1/1:5,9:14:8.89:147,9,0	1/1:35,22:51:36.08:526,36,0	0/0:26,0:26:57.14:0,57,686	0/0:4,0:4:9.02:0,9,99	0/0:46,0:46:99:0,105,1224	0/0:17,0:16:25.26:0,25,283	0/0:27,0:26:42.42:0,42,712	1/1:5,8:13:22.55:296,23,0	0/0:9,0:9:17.53:0,18,183
chr10	106682693	.	TAC	T	2782.11	PASS	AB=0.740;AC=12;AF=0.214;AN=56;BaseQRankSum=10.760;DP=785;FS=0.000;HRun=0;HaplotypeScore=113.8448;InbreedingCoeff=0.7871;MQ=54.76;MQ0=6;MQRankSum=-0.607;QD=14.05;ReadPosRankSum=1.755;VQSLOD=2.9977;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:84.28:0,84,1309	1/1:2,14:16:27.08:328,27,0	0/0:27,0:10:29.46:0,29,419	0/0:25,0:13:39.07:0,39,492	0/0:20,0:20:54.18:0,54,853	0/0:17,0:17:34.65:0,35,492	0/0:36,3:39:29.82:0,30,943	1/1:20,16:33:18.51:396,19,0	0/0:21,1:21:14.76:0,15,710	0/0:21,0:20:48.16:0,48,773	0/0:19,0:19:45.12:0,45,677	0/0:34,1:35:32.51:0,33,1337	0/0:33,0:33:81.19:0,81,1298	0/0:27,0:28:61.33:0,61,1061	0/0:25,1:26:23.81:0,24,883	0/0:16,0:15:30.10:0,30,481	0/0:38,0:38:61.10:0,61,1315	0/0:36,0:36:75.16:0,75,1138	1/1:9,13:20:17.14:406,17,0	1/1:4,20:24:36.11:437,36,0	1/1:22,51:66:78.07:919,78,0	0/0:35,1:36:41.84:0,42,1142	0/0:10,0:10:30.10:0,30,481	0/0:36,3:39:11.51:0,12,1179	0/0:16,1:17:2.74:0,3,541	0/0:38,0:38:88.85:0,89,1413	0/1:5,13:18:2.83:464,0,3	0/1:8,1:9:12.30:12,0,314
chr10	106683681	.	CT	C	2583.99	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.724;DP=722;FS=5.048;HRun=2;HaplotypeScore=84.2130;InbreedingCoeff=0.9992;MQ=89.69;MQ0=0;MQRankSum=-2.080;QD=34.45;ReadPosRankSum=0.575;VQSLOD=3.9174;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:54:99:0,157,2295	0/0:8,0:8:24.08:0,24,360	0/0:39,0:39:99:0,105,1501	0/0:31,0:31:90.26:0,90,1282	0/0:26,0:26:72.05:0,72,1056	1/1:0,20:20:57.19:740,57,0	1/1:0,33:33:93.30:1208,93,0	0/0:28,0:28:78.25:0,78,1132	1/1:0,22:22:60.20:779,60,0	0/0:29,0:29:84.28:0,84,1241	0/0:19,0:19:54.17:0,54,789	0/0:25,0:25:75.25:0,75,1123	0/0:27,0:27:75.23:0,75,1085	0/0:18,0:18:48.15:0,48,697	0/0:23,0:23:69.23:0,69,1029	0/0:28,0:28:84.28:0,84,1239	0/0:30,0:30:87.29:0,87,1304	0/0:15,0:15:42.14:0,42,629	0/0:15,0:15:45.14:0,45,652	0/0:27,0:27:75.03:0,75,961	0/0:59,0:59:99:0,138,2039	0/0:16,0:16:45.15:0,45,672	0/0:23,0:23:66.21:0,66,968	0/0:29,0:29:84.24:0,84,1232	0/0:30,0:30:90.30:0,90,1345	0/0:17,0:17:51.17:0,51,765	0/0:18,0:18:54.18:0,54,808	0/0:12,0:12:36.12:0,36,540
chr10	106683751	.	G	GA	4507.79	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.165;DP=745;FS=7.128;HRun=1;HaplotypeScore=97.2675;InbreedingCoeff=0.9999;MQ=82.16;MQ0=0;MQRankSum=-9.156;QD=28.90;ReadPosRankSum=-3.956;VQSLOD=3.0628;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,181,2307	1/1:13,6:19:51.03:664,51,0	0/0:19,0:19:39.32:0,39,547	0/0:25,0:25:69.22:0,69,890	0/0:27,0:27:78.24:0,78,998	0/0:24,0:24:72.19:0,72,890	0/0:39,0:39:99:0,111,1441	1/1:11,21:32:84.22:1071,84,0	0/0:25,0:25:66.16:0,66,824	0/0:30,0:30:84.26:0,84,1059	0/0:23,0:23:69.21:0,69,879	0/0:32,0:32:96.31:0,96,1246	0/0:24,0:24:60.19:0,60,778	0/0:23,0:23:66.21:0,66,857	0/0:35,0:35:99:0,99,1285	0/0:23,0:23:69.22:0,69,896	0/0:33,0:33:96.26:0,96,1198	0/0:19,0:19:57.15:0,57,710	1/1:12,9:21:54.56:668,55,0	1/1:17,9:26:71.69:891,72,0	1/1:23,16:39:57.08:668,57,0	0/0:17,0:17:48.16:0,48,621	0/0:27,0:27:75.23:0,75,959	0/0:22,0:22:66.13:0,66,821	0/0:28,0:28:84.25:0,84,1054	0/0:21,0:21:60.17:0,60,762	1/1:8,11:19:42.11:546,42,0	0/0:11,0:11:33.11:0,33,428
chr10	106683758	.	AC	A	4183.99	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=16.614;DP=713;FS=1.192;HRun=1;HaplotypeScore=90.9447;InbreedingCoeff=1.0000;MQ=81.32;MQ0=0;MQRankSum=-9.620;QD=30.76;ReadPosRankSum=-3.628;VQSLOD=2.4930;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,184,2824	1/1:10,7:17:50.97:638,51,0	0/0:18,0:18:54.16:0,54,803	0/0:23,0:23:62.99:0,63,895	0/0:27,0:27:81.26:0,81,1260	0/0:19,0:19:57.19:0,57,908	0/0:34,0:34:99:0,102,1577	1/1:0,30:30:84.22:1016,84,0	0/0:24,0:24:66.19:0,66,1005	0/0:26,0:26:75.26:0,75,1197	0/0:23,0:23:63.21:0,63,1006	0/0:33,0:33:99:0,99,1558	0/0:21,0:21:60.19:0,60,934	0/0:22,0:22:66.23:0,66,1054	0/0:37,0:37:99:0,111,1741	0/0:23,0:23:69.20:0,69,1056	0/0:35,0:35:99:0,105,1605	0/0:19,0:19:57.16:0,57,873	1/1:6,10:16:45.08:546,45,0	1/1:14,10:24:63.08:770,63,0	1/1:18,14:32:53.95:584,54,0	0/0:18,0:18:51.17:0,51,804	0/0:26,0:26:78.23:0,78,1198	0/0:23,0:23:66.21:0,66,1027	0/0:29,0:29:87.27:0,87,1345	0/0:23,0:23:66.21:0,66,1029	1/1:7,10:17:51.12:631,51,0	0/0:13,0:13:39.07:0,39,549
chr10	106684819	.	C	CAACA	489.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.306;DP=747;FS=1.076;HRun=0;HaplotypeScore=136.4959;InbreedingCoeff=0.9693;MQ=64.81;MQ0=1;MQRankSum=1.874;QD=18.83;ReadPosRankSum=-2.416;VQSLOD=3.0004;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:69.21:0,69,1044	0/0:12,0:12:20.79:0,21,214	0/0:26,0:21:18.02:0,18,244	0/0:36,0:32:33.10:0,33,480	0/0:32,0:32:75.25:0,75,1178	0/0:21,0:21:48.16:0,48,752	1/1:8,16:26:24.08:583,24,0	0/0:36,0:36:19.24:0,19,340	0/0:28,0:28:63.18:0,63,953	0/0:38,0:38:75.26:0,75,1202	0/0:17,0:17:30.07:0,30,445	0/0:31,0:31:72.13:0,72,1114	0/0:22,0:22:51.16:0,51,766	0/0:24,0:24:48.16:0,48,739	0/0:28,0:28:42.14:0,42,668	0/0:27,0:27:57.13:0,57,876	0/0:25,0:25:54.18:0,54,866	0/0:26,0:26:19.41:0,19,793	0/0:23,0:23:32.95:0,33,306	0/0:21,0:21:54.13:0,54,616	0/0:31,0:31:61.44:0,61,775	0/0:27,0:27:66.22:0,66,1027	0/0:13,0:13:21.04:0,21,289	0/0:37,0:37:90.29:0,90,1394	0/0:29,0:29:75.25:0,75,1188	0/0:28,0:27:48.15:0,48,755	0/0:22,0:22:45.08:0,45,536	0/0:28,0:28:69.21:0,69,1085
chr10	106685068	.	A	ACAAAACAAATGT	16776.27	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-3.265;DP=731;FS=5.108;HRun=0;HaplotypeScore=237.0453;InbreedingCoeff=0.9989;MQ=84.06;MQ0=1;MQRankSum=-13.615;QD=117.32;ReadPosRankSum=-3.813;VQSLOD=3.9272;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,4829	1/1:4,8:14:33.11:1811,33,0	0/0:24,0:24:52.68:0,53,1466	0/0:24,0:24:46.80:0,47,1475	0/0:21,0:21:60.19:0,60,1952	0/0:27,0:26:69.24:0,69,2345	0/0:30,0:30:87.28:0,87,3097	1/1:18,7:34:84.26:3662,84,0	0/0:25,0:25:69.20:0,69,2203	0/0:29,0:29:66.23:0,66,2308	0/0:12,0:12:30.10:0,30,1111	0/0:28,0:28:81.28:0,81,2912	0/0:28,0:28:78.25:0,78,2525	0/0:28,0:28:78.27:0,78,2806	0/0:27,0:27:75.26:0,75,2745	0/0:29,0:29:87.30:0,87,3060	0/0:42,0:42:99:0,126,4458	0/0:27,0:27:61:0,61,2305	1/1:10,3:15:39.10:1493,39,0	1/1:9,21:36:84.29:4605,84,0	1/1:12,3:18:30.10:1580,30,0	0/0:24,0:24:72.25:0,72,2515	0/0:23,0:23:60.16:0,60,1922	0/0:29,0:29:84.29:0,84,2966	0/0:26,0:26:75.25:0,75,2588	0/0:31,0:31:93.32:0,93,3249	1/1:11,13:26:72.25:3625,72,0	0/0:7,0:7:21.07:0,21,711
chr10	106687592	.	G	GT	5742.59	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.474;DP=714;FS=7.626;HRun=1;HaplotypeScore=74.6565;InbreedingCoeff=0.9942;MQ=79.84;MQ0=0;MQRankSum=-1.978;QD=39.88;ReadPosRankSum=-1.478;VQSLOD=4.6376;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1518	1/1:0,6:6:12.51:180,13,0	0/0:19,0:19:46.93:0,47,518	0/0:14,0:14:29.83:0,30,358	0/0:22,0:22:66.21:0,66,856	0/0:29,0:29:87.26:0,87,1101	0/0:24,0:24:63.19:0,63,803	1/1:1,26:27:81.25:1168,81,0	0/0:28,0:28:81.25:0,81,1036	0/0:35,0:35:99:0,102,1324	0/0:16,0:16:42.14:0,42,545	0/0:48,0:48:99:0,141,1814	0/0:30,0:30:90.25:0,90,1123	0/0:26,0:26:78.25:0,78,1012	0/0:28,0:28:84.27:0,84,1090	0/0:22,0:22:63.20:0,63,818	0/0:28,0:28:81.20:0,81,1003	0/0:24,0:24:72.22:0,72,917	1/1:2,18:20:54.17:788,54,0	1/1:1,18:19:51.13:739,51,0	1/1:1,41:42:99:1662,111,0	0/0:27,0:27:78.22:0,78,981	0/0:20,0:20:60.18:0,60,763	0/0:22,0:22:66.21:0,66,856	0/0:23,0:23:69.20:0,69,879	0/0:32,0:32:93.29:0,93,1192	1/1:2,27:30:81.27:1205,81,0	0/0:14,0:14:42.10:0,42,515
chr10	106690127	.	TAA	T	1269.81	PASS	AB=0.938;AC=14;AF=0.250;AN=56;BaseQRankSum=4.725;DP=540;FS=3.951;HRun=15;HaplotypeScore=74.7075;InbreedingCoeff=0.8437;MQ=69.04;MQ0=0;MQRankSum=0.555;QD=8.52;ReadPosRankSum=3.305;VQSLOD=1.4554;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:31:64.41:0,64,568	1/1:4,10:14:23.91:211,24,0	0/1:20,0:10:0.96:1,0,119	0/1:11,0:11:7.54:8,0,52	0/0:15,0:16:23.90:0,24,241	0/0:25,0:25:59.48:0,59,657	0/0:15,0:16:41.61:0,42,511	1/1:6,17:23:40.65:347,41,0	0/0:6,0:19:38.18:0,38,176	0/0:23,0:26:44.30:0,44,488	0/0:28,0:29:64.88:0,65,751	0/0:16,0:17:38.52:0,39,405	0/0:13,0:13:27.06:0,27,335	0/0:19,0:19:32.51:0,33,377	0/0:22,0:22:45.11:0,45,566	0/0:16,0:18:45.12:0,45,557	0/0:26,0:26:75.11:0,75,900	0/0:17,0:18:42.06:0,42,496	1/1:9,10:19:31.98:283,32,0	1/1:12,11:25:8.55:140,9,0	1/1:6,5:11:16.97:156,17,0	0/0:9,0:9:18.01:0,18,222	0/0:21,0:21:34.86:0,35,374	0/0:13,0:15:29.53:0,30,310	0/0:13,0:13:39.01:0,39,413	0/0:22,0:22:34.02:0,34,376	1/1:5,18:23:22.03:308,22,0	0/0:16,0:16:39.06:0,39,452
chr10	106690473	.	G	GACACAGACAC	4934.58	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-8.073;DP=651;FS=15.072;HRun=0;HaplotypeScore=185.9243;InbreedingCoeff=0.9825;MQ=57.53;MQ0=14;MQRankSum=-4.711;QD=33.80;ReadPosRankSum=-3.462;VQSLOD=2.9982;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:78.48:0,78,2561	1/1:1,11:12:18.06:914,18,0	0/0:30,0:15:14.96:0,15,137	0/0:25,0:17:26.66:0,27,394	0/0:12,0:12:29.89:0,30,723	0/0:19,0:19:19.50:0,19,1022	0/0:39,0:39:90.16:0,90,1858	1/1:36,0:33:58.42:1026,58,0	0/0:26,0:26:68.92:0,69,1620	0/0:18,0:18:45.14:0,45,1053	0/0:14,0:13:30.09:0,30,794	0/0:20,0:20:45.15:0,45,1305	0/0:19,0:19:45.05:0,45,1215	0/0:18,0:18:39.07:0,39,849	0/0:31,0:31:81.12:0,81,1982	0/0:25,0:25:66.20:0,66,1778	0/0:29,0:28:57.17:0,57,1529	0/0:25,0:25:60.13:0,60,1493	1/1:4,17:22:54.10:1083,54,0	1/1:3,13:18:12.04:547,12,0	1/1:33,0:31:15.03:310,15,0	0/0:10,0:10:27.08:0,27,580	0/0:16,0:16:39.06:0,39,885	0/0:30,0:30:72.15:0,72,1797	0/0:12,0:12:30.10:0,30,850	0/0:25,0:25:54.17:0,54,1355	1/1:6,18:25:20.60:1054,21,0	0/0:11,0:11:27.09:0,27,774
chr10	106690643	.	TGCGG	T	369.75	PASS	AB=1.000;AC=9;AF=0.196;AN=46;BaseQRankSum=-0.175;DP=181;FS=9.630;HRun=0;HaplotypeScore=30.6160;InbreedingCoeff=0.5532;MQ=87.95;MQ0=5;MQRankSum=-2.283;QD=10.87;ReadPosRankSum=1.979;VQSLOD=0.4776;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:9.47:0,9,86	./.	0/0:24,0:14:32.08:0,32,292	0/0:10,0:4:8.85:0,9,57	0/0:6,0:6:8.90:0,9,60	0/0:4,0:4:5.93:0,6,40	0/0:18,0:17:0.90:0,1,91	1/1:0,6:6:14.96:127,15,0	0/0:5,0:5:13.75:0,14,96	0/0:7,0:7:16.27:0,16,101	./.	0/1:4,0:4:0:0,0,0	0/0:4,0:3:5.95:0,6,44	0/0:3,0:3:2.94:0,3,18	0/0:6,0:6:7.97:0,8,46	0/0:1,0:1:3:0,3,27	./.	0/0:7,0:7:3.01:0,3,77	1/1:7,0:8:11.92:88,12,0	./.	1/1:9,0:9:11.96:93,12,0	0/0:3,0:3:3:0,3,28	0/0:3,0:3:8.96:0,9,69	0/0:3,0:2:2.97:0,3,20	0/0:13,0:13:14.95:0,15,135	0/0:3,0:3:2.97:0,3,20	1/1:5,1:7:18.01:198,18,0	./.
chr10	106690730	.	CAAA	C	1087.91	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=5.126;DP=329;FS=1.585;HRun=12;HaplotypeScore=47.7808;InbreedingCoeff=0.7824;MQ=55.03;MQ0=19;MQRankSum=-1.340;QD=11.22;ReadPosRankSum=4.011;VQSLOD=-0.7183;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:15.12:0,15,528	1/1:1,4:6:11.96:132,12,0	0/0:32,0:9:3.89:0,4,48	0/1:34,0:8:17.95:18,0,83	0/0:15,0:17:35.64:0,36,560	0/0:11,0:11:26.54:0,27,438	0/0:11,0:11:27.05:0,27,459	1/1:3,7:7:15.05:184,15,0	0/0:9,0:9:24.08:0,24,446	0/0:9,0:9:14.73:0,15,296	0/0:4,0:4:6.86:0,7,80	0/0:5,0:5:15.05:0,15,295	0/0:7,0:7:21.07:0,21,390	0/0:12,0:12:33.11:0,33,626	0/0:9,0:8:21.05:0,21,378	0/0:13,0:13:30.10:0,30,559	0/0:19,0:20:54.10:0,54,964	0/0:11,0:11:30.10:0,30,572	1/1:5,6:7:18.06:227,18,0	1/1:3,10:13:21.02:257,21,0	1/1:3,8:11:15.03:189,15,0	0/0:2,0:2:3:0,3,28	0/0:10,0:10:24.04:0,24,426	0/0:13,0:15:30.57:0,31,567	0/0:3,0:4:8.99:0,9,104	0/0:10,0:11:24.06:0,24,434	1/1:4,7:9:20.05:264,20,0	0/0:5,0:4:9.03:0,9,161
chr10	106691248	.	GAGGCAGAGGC	G	6103.44	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.448;DP=557;FS=5.489;HRun=0;HaplotypeScore=165.5411;InbreedingCoeff=0.9930;MQ=66.27;MQ0=1;MQRankSum=-10.663;QD=65.63;ReadPosRankSum=2.328;VQSLOD=4.5671;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:99:0,114,5116	1/1:0,11:11:30.10:964,30,0	0/0:25,0:24:63.17:0,63,2675	0/0:19,0:16:45.15:0,45,2258	0/0:24,0:24:63.22:0,63,2894	0/0:17,0:17:45.15:0,45,2138	0/0:23,0:23:60.19:0,60,2624	1/1:5,18:23:54.17:1553,54,0	0/0:20,0:20:48.16:0,48,2360	0/0:33,0:33:93.31:0,93,4076	0/0:19,0:19:51.17:0,51,2468	0/0:12,0:12:33.11:0,33,1664	0/0:17,0:17:48.16:0,48,2415	0/0:15,0:15:42.14:0,42,2132	0/0:33,0:33:90.31:0,90,4380	0/0:14,0:14:36.10:0,36,1592	0/0:27,0:27:81.24:0,81,3837	0/0:21,0:21:63.19:0,63,3076	1/1:1,9:10:24.08:771,24,0	1/1:0,18:18:45.11:1369,45,0	1/1:5,8:13:12.04:386,12,0	0/0:15,0:15:36.12:0,36,1711	0/0:16,0:16:39.13:0,39,1864	0/0:15,0:15:45.15:0,45,2264	0/0:18,0:18:48.16:0,48,1986	0/0:23,0:23:54.17:0,54,2498	1/1:3,15:18:33.11:1060,33,0	0/0:19,0:19:57.20:0,57,2828
chr10	106691463	.	GTCCCC	G	2439.03	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-0.941;DP=299;FS=38.566;HRun=0;HaplotypeScore=69.6549;InbreedingCoeff=0.7925;MQ=67.89;MQ0=3;MQRankSum=-2.591;QD=23.68;ReadPosRankSum=3.792;VQSLOD=1.0917;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:15.02:0,15,242	1/1:0,6:5:9.03:201,9,0	0/1:41,0:13:30.99:31,0,280	0/0:39,0:16:33.42:0,33,537	0/0:8,0:8:11.98:0,12,298	0/0:6,0:6:12.01:0,12,234	0/0:16,0:16:39.08:0,39,1132	1/1:0,8:8:24.04:467,24,0	0/0:12,0:13:38.40:0,38,415	0/0:11,0:12:18.06:0,18,408	0/0:11,0:11:23.98:0,24,441	0/0:2,0:2:6.02:0,6,169	0/0:3,0:3:9.03:0,9,257	0/0:5,0:5:11.99:0,12,293	0/0:8,0:8:20.64:0,21,386	0/0:5,0:5:15.04:0,15,292	0/0:14,0:14:36.12:0,36,998	0/0:4,0:4:9.03:0,9,185	1/1:5,5:10:20.98:338,21,0	1/1:0,16:16:36.08:755,36,0	1/1:0,13:13:18.06:406,18,0	0/0:12,0:13:23.96:0,24,566	0/0:6,0:6:8.88:0,9,167	0/0:8,0:8:18.03:0,18,409	0/0:5,0:5:8.60:0,9,242	0/0:7,0:7:18.05:0,18,495	1/1:0,7:7:21.07:427,21,0	0/0:4,0:4:12.01:0,12,241
chr10	106691577	.	AC	A	1243.01	PASS	AB=0.966;AC=20;AF=0.357;AN=56;BaseQRankSum=0.955;DP=478;FS=104.604;HRun=1;HaplotypeScore=77.7311;InbreedingCoeff=0.3888;MQ=64.83;MQ0=9;MQRankSum=-3.962;QD=5.40;ReadPosRankSum=-6.284;VQSLOD=-0.6021;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:20.01:20,0,178	1/1:15,0:15:36.60:220,37,0	0/0:40,0:15:23.75:0,24,235	0/0:28,1:13:19.05:0,19,189	0/0:18,0:18:11.29:0,11,249	0/0:11,1:12:23.10:0,23,216	0/0:23,0:23:40.92:0,41,324	1/1:15,3:18:31:203,31,0	0/0:12,0:12:4.55:0,5,153	0/1:13,0:13:8.94:9,0,122	0/1:18,2:20:99:111,0,112	0/0:17,0:17:10.76:0,11,188	0/1:11,1:12:6.48:6,0,172	0/0:12,5:16:24.08:0,24,200	0/0:14,0:13:13.33:0,13,209	0/0:12,0:12:16.74:0,17,136	0/0:19,0:19:25.92:0,26,237	0/0:5,0:5:8.19:0,8,55	1/1:22,1:21:25.69:295,26,0	1/1:10,3:12:26.07:176,26,0	1/1:9,0:7:12.36:89,12,0	0/0:9,0:9:12.40:0,12,98	0/1:14,1:15:2.43:2,0,191	0/1:12,0:12:4.83:5,0,59	0/1:23,0:23:15.08:15,0,192	0/0:20,0:20:34.99:0,35,344	1/1:14,1:15:29.83:178,30,0	0/1:20,1:21:99:101,0,139
chr10	106691600	.	G	GTGGT	5855.23	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-2.870;DP=423;FS=2.786;HRun=0;HaplotypeScore=83.2218;InbreedingCoeff=0.9903;MQ=71.30;MQ0=0;MQRankSum=-9.191;QD=62.96;ReadPosRankSum=-2.710;VQSLOD=5.8908;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.20:0,57,1062	1/1:1,11:12:36.09:898,36,0	0/0:23,0:22:63.22:0,63,1163	0/0:22,0:17:39.03:0,39,680	0/0:15,0:15:42.14:0,42,783	0/0:13,0:13:39.13:0,39,727	0/0:24,0:24:69.19:0,69,1248	1/1:5,18:23:66.23:1716,66,0	0/0:18,0:18:48.16:0,48,895	0/0:10,0:10:30.10:0,30,559	0/0:13,0:13:36.12:0,36,672	0/0:20,0:20:57.20:0,57,1058	0/0:15,0:15:39.11:0,39,694	0/0:13,0:13:33.09:0,33,552	0/0:17,0:17:48.16:0,48,896	0/0:13,0:13:36.12:0,36,659	0/0:20,0:20:45.13:0,45,805	0/0:5,0:5:15.05:0,15,280	1/1:5,16:22:63.19:1407,63,0	1/1:2,7:10:15.01:335,15,0	1/1:4,9:12:20.64:543,21,0	0/0:8,0:8:18.06:0,18,335	0/0:10,0:10:30.08:0,30,526	0/0:12,0:12:30.08:0,30,525	0/0:10,0:10:30.10:0,30,548	0/0:15,0:15:42.14:0,42,784	1/1:0,13:13:36.12:956,36,0	0/0:12,0:12:33.11:0,33,616
chr10	106693466	.	T	TA	2389.02	PASS	AB=0.797;AC=14;AF=0.250;AN=56;BaseQRankSum=-7.330;DP=584;FS=3.139;HRun=11;HaplotypeScore=67.4423;InbreedingCoeff=0.6718;MQ=76.29;MQ0=7;MQRankSum=0.503;QD=11.71;ReadPosRankSum=-3.845;VQSLOD=2.5111;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:30:31.35:0,31,414	0/1:5,9:14:2.10:214,0,2	0/1:33,0:21:3.57:4,0,170	0/1:24,0:13:0.28:0,0,54	0/0:24,1:26:31.35:0,31,414	0/0:15,0:16:46.83:0,47,350	0/0:17,0:18:46.81:0,47,350	1/1:10,25:36:33.91:601,34,0	1/1:2,8:10:18.04:182,18,0	0/0:25,0:25:62.46:0,62,484	0/0:23,0:22:29.95:0,30,310	0/0:12,0:12:29.88:0,30,232	0/0:13,0:13:35.84:0,36,276	0/0:10,0:11:29.88:0,30,230	0/0:17,0:17:50.79:0,51,392	0/0:11,0:11:29.83:0,30,224	0/0:27,0:28:76.75:0,77,586	0/0:29,0:31:64.75:0,65,493	1/1:8,14:23:50.91:492,51,0	0/1:8,21:29:41.11:513,0,41	1/1:2,6:8:18.04:183,18,0	0/0:21,0:20:53.78:0,54,417	0/0:21,0:21:44.79:0,45,348	0/0:22,0:23:52.84:0,53,401	0/0:10,0:12:25.93:0,26,192	0/0:21,1:22:23.28:0,23,364	1/1:6,20:26:1.27:371,1,0	0/0:20,0:19:41.81:0,42,325
chr10	106694127	.	TC	T	3846.99	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=12.423;DP=327;FS=3.336;HRun=4;HaplotypeScore=40.2961;InbreedingCoeff=0.8378;MQ=76.30;MQ0=0;MQRankSum=-1.297;QD=29.37;ReadPosRankSum=1.010;VQSLOD=2.9804;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.15:0,45,630	1/1:1,2:3:6.02:72,6,0	0/0:8,0:8:21.07:0,21,294	0/0:5,0:5:15.05:0,15,207	0/0:4,0:4:12.04:0,12,166	./.	0/0:32,0:32:90.27:0,90,1224	1/1:2,8:10:24.07:288,24,0	0/0:5,0:5:15.05:0,15,210	0/0:10,0:10:27.08:0,27,360	0/0:3,0:3:9.03:0,9,124	0/0:4,0:4:12.04:0,12,167	0/0:4,0:4:12.04:0,12,168	0/0:7,0:7:21.07:0,21,294	0/0:4,0:4:9.03:0,9,126	0/0:3,0:3:9.02:0,9,109	0/0:22,0:22:66.22:0,66,924	0/0:15,0:15:45.15:0,45,629	1/1:0,9:9:27.08:324,27,0	1/1:0,3:3:9.03:108,9,0	1/1:6,99:105:99:3022,252,0	0/0:5,0:5:15.05:0,15,206	0/0:3,0:3:6.01:0,6,67	0/0:21,0:21:48.15:0,48,655	0/0:5,0:5:12.04:0,12,167	0/0:9,0:9:27.09:0,27,378	1/1:1,0:1:3.01:33,3,0	0/0:10,0:10:24.08:0,24,330
chr10	106694519	.	AGCGGGT	A	71.38	PASS	AC=6;AF=0.176;AN=34;BaseQRankSum=2.525;DP=64;FS=0.000;HRun=0;HaplotypeScore=20.6319;InbreedingCoeff=0.3849;MQ=82.90;MQ0=0;MQRankSum=-2.889;QD=4.46;ReadPosRankSum=-0.614;VQSLOD=0.8611;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:8.92:0,9,190	./.	0/0:2,0:2:2.80:0,3,13	0/0:3,0:3:6.02:0,6,149	0/0:2,0:2:6.02:0,6,171	./.	0/0:7,0:7:21.07:0,21,646	./.	./.	0/0:2,0:2:3.01:0,3,99	./.	0/0:1,0:1:3.01:0,3,83	./.	0/0:1,0:1:3.01:0,3,102	./.	./.	0/0:4,0:4:12.04:0,12,398	0/0:5,0:5:15.05:0,15,437	1/1:0,2:2:3.01:65,3,0	./.	1/1:5,8:13:3.48:39,3,0	0/0:1,0:1:3.01:0,3,85	./.	0/0:10,0:10:30.10:0,30,943	0/0:1,0:1:3.01:0,3,97	0/0:4,0:4:9:0,9,171	1/1:0,1:1:3.01:66,3,0	./.
chr10	106694632	.	G	GGA	692.32	PASS	AB=0.675;AC=9;AF=0.205;AN=44;BaseQRankSum=-2.433;DP=168;FS=9.957;HRun=0;HaplotypeScore=30.8810;InbreedingCoeff=0.2220;MQ=62.13;MQ0=0;MQRankSum=-4.563;QD=10.49;ReadPosRankSum=-1.104;VQSLOD=1.1270;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:21.07:0,21,320	0/0:1,0:1:3:0,3,27	0/0:1,0:1:2.37:0,2,8	0/0:4,0:3:6.02:0,6,81	0/0:3,0:3:9.03:0,9,136	./.	0/0:20,0:20:57.15:0,57,846	0/1:2,3:5:33.09:154,0,33	1/1:0,2:2:6.02:112,6,0	0/0:5,0:5:9.03:0,9,138	./.	0/0:2,0:2:6.02:0,6,91	0/0:4,0:4:9.03:0,9,137	./.	./.	0/0:1,0:1:3.01:0,3,46	0/0:18,0:18:48.14:0,48,681	0/0:10,0:10:30.10:0,30,444	0/1:2,3:5:36.90:105,0,37	1/1:0,1:1:3.01:56,3,0	0/1:37,15:52:99:332,0,247	0/0:3,0:3:6.01:0,6,73	0/0:1,0:1:3.01:0,3,46	0/0:18,0:18:54.18:0,54,813	./.	./.	1/1:0,1:1:3.01:57,3,0	0/0:4,0:4:6.02:0,6,91
chr10	106695010	.	T	TAAAA	2339.16	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=7.021;DP=456;FS=9.076;HRun=11;HaplotypeScore=81.8761;InbreedingCoeff=0.8844;MQ=62.67;MQ0=3;MQRankSum=-5.153;QD=22.07;ReadPosRankSum=-4.389;VQSLOD=0.5081;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:41:95.99:0,96,1272	1/1:1,2:3:6.02:139,6,0	0/0:18,0:12:20.85:0,21,208	0/1:14,0:8:1.59:2,0,108	0/0:13,0:13:29.98:0,30,393	0/0:21,0:22:60.13:0,60,797	0/0:29,0:29:69.09:0,69,921	1/1:19,5:29:48.12:792,48,0	1/1:2,0:13:18.52:116,19,0	0/0:12,0:12:33.09:0,33,448	0/0:6,0:6:11.97:0,12,163	0/0:19,0:20:37.19:0,37,494	0/0:15,0:16:45.08:0,45,579	0/0:13,0:13:30.05:0,30,409	0/0:9,0:9:27.08:0,27,351	0/0:10,0:11:24.02:0,24,310	0/0:31,0:32:90.24:0,90,1192	0/0:18,0:18:51.13:0,51,675	1/1:7,6:13:30.10:644,30,0	1/1:2,2:4:9.03:193,9,0	1/1:5,5:10:6.02:127,6,0	0/0:7,0:7:18.03:0,18,245	0/0:11,0:11:30.10:0,30,409	0/0:20,0:22:61.39:0,61,784	0/0:7,0:7:21.07:0,21,286	0/0:25,0:26:67.37:0,67,903	1/1:8,7:18:27.09:513,27,0	0/0:16,0:16:23.80:0,24,326
chr10	106695343	.	T	TC	161.85	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.783;DP=262;FS=9.644;HRun=7;HaplotypeScore=33.2605;InbreedingCoeff=0.4982;MQ=79.08;MQ0=0;MQRankSum=1.050;QD=17.98;ReadPosRankSum=0.789;VQSLOD=2.0446;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:36.05:0,36,347	0/0:2,0:2:6.01:0,6,58	0/0:10,0:10:26.79:0,27,206	0/0:8,0:8:15.02:0,15,144	0/0:10,0:10:30.01:0,30,281	0/0:7,0:7:18.03:0,18,174	0/0:8,0:8:15.02:0,15,144	0/0:34,0:34:81.08:0,81,767	1/1:0,9:9:21.06:253,21,0	0/0:9,0:9:24.04:0,24,232	0/0:2,0:2:3:0,3,29	0/0:8,0:8:20.96:0,21,185	0/0:5,0:5:15.02:0,15,145	0/0:7,0:7:18.03:0,18,174	0/0:5,0:5:12.02:0,12,115	0/0:5,0:5:0.07:0,0,101	0/0:18,0:18:42.06:0,42,405	0/0:14,0:14:33.05:0,33,319	0/0:10,0:10:24.04:0,24,232	0/0:10,0:10:30.05:0,30,289	0/0:11,0:11:24.03:0,24,231	0/0:1,0:1:3:0,3,29	0/0:5,0:5:15.02:0,15,144	0/0:3,0:3:9:0,9,81	0/0:5,0:5:15.02:0,15,145	0/0:14,0:14:39.06:0,39,376	0/0:12,0:12:36.06:0,36,347	0/0:12,0:12:33.05:0,33,318
chr10	106695383	.	G	GTA	1605.87	PASS	AB=0.746;AC=25;AF=0.481;AN=52;BaseQRankSum=-6.770;DP=226;FS=9.319;HRun=0;HaplotypeScore=39.0825;InbreedingCoeff=0.0926;MQ=65.26;MQ0=4;MQRankSum=3.825;QD=12.85;ReadPosRankSum=2.135;VQSLOD=2.0109;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,2:10:28.78:41,0,29	0/0:1,0:3:5.68:0,6,28	0/1:15,0:7:0.21:0,0,0	0/0:23,0:6:3.75:0,4,17	1/1:4,0:7:5.96:43,6,0	0/1:1,5:6:25.79:85,0,26	1/1:0,1:1:3.01:47,3,0	0/0:16,0:35:28.41:0,28,140	0/0:1,0:3:5.68:0,6,28	1/1:0,1:1:3.01:47,3,0	1/1:1,0:1:3:25,3,0	0/1:4,4:9:16.77:195,0,17	1/1:0,1:1:3.01:47,3,0	0/0:2,0:3:2.84:0,3,14	0/1:1,0:1:0:0,0,0	./.	0/1:11,13:26:99:523,0,188	1/1:7,6:13:12.51:188,13,0	0/0:6,0:8:5.68:0,6,28	0/0:5,0:10:5.68:0,6,28	./.	1/1:2,0:2:3.01:44,3,0	0/0:2,0:2:2.99:0,3,24	1/1:0,1:1:3.01:47,3,0	0/1:3,5:9:33.92:126,0,34	0/1:5,2:7:25.79:82,0,26	0/0:3,0:11:11.30:0,11,63	0/1:6,8:15:16.75:216,0,17
chr10	106697185	.	ACC	A	697.66	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=3.619;DP=511;FS=5.017;HRun=5;HaplotypeScore=68.4460;InbreedingCoeff=0.8484;MQ=75.07;MQ0=19;MQRankSum=-5.497;QD=9.97;ReadPosRankSum=1.758;VQSLOD=-0.4119;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:96.27:0,96,1519	0/0:3,0:3:0.13:0,0,13	0/0:68,0:25:58.81:0,59,785	0/0:53,0:21:34.13:0,34,429	0/0:21,0:21:60.19:0,60,1001	0/0:18,0:18:45.14:0,45,754	0/0:19,0:19:42.03:0,42,634	1/1:11,2:13:13.31:166,13,0	0/0:9,0:9:27.07:0,27,427	0/0:14,0:14:36.11:0,36,623	0/0:16,0:15:36.11:0,36,605	0/0:11,0:11:30.04:0,30,369	0/0:4,0:4:6.02:0,6,104	0/0:7,0:7:12.04:0,12,207	0/0:12,0:12:30.10:0,30,521	0/0:13,0:13:33.09:0,33,515	0/0:26,0:26:72.14:0,72,1046	0/0:16,0:15:42.12:0,42,720	1/1:16,1:19:24.94:296,25,0	1/1:8,2:11:13:143,13,0	1/1:9,0:9:12.50:149,12,0	0/0:8,0:8:15.05:0,15,255	0/0:16,0:16:48.15:0,48,760	0/0:22,0:22:63.19:0,63,1076	0/0:14,0:13:27.09:0,27,468	0/0:19,0:19:57.14:0,57,921	1/1:17,0:16:2.70:102,3,0	0/0:14,0:14:30.10:0,30,521
chr10	106697324	.	GGTGTGTGTGTGTGTGTGTGT	G	394.71	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=2.286;DP=369;FS=7.927;HRun=0;HaplotypeScore=172.6106;InbreedingCoeff=0.6242;MQ=58.40;MQ0=11;MQRankSum=-2.378;QD=5.41;ReadPosRankSum=-1.195;VQSLOD=1.6853;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:54.19:0,54,3978	1/1:0,1:1:3.01:159,3,0	0/0:20,0:12:21.07:0,21,810	0/0:18,0:11:9.22:0,9,404	0/0:12,0:13:24.07:0,24,1590	0/0:9,0:9:9.03:0,9,379	0/0:13,0:13:24.08:0,24,1729	1/1:21,0:20:3.01:54,3,0	0/0:7,0:7:3.01:0,3,93	0/0:15,0:15:36.10:0,36,2180	0/0:15,0:15:17.36:0,17,1136	0/0:7,0:7:9.50:0,10,516	0/0:11,0:11:20.43:0,20,1253	0/0:8,0:8:9.03:0,9,791	0/0:11,0:11:24.08:0,24,1774	0/0:6,0:6:6.02:0,6,411	0/0:24,0:24:45.12:0,45,2934	0/0:21,0:20:51.17:0,51,3735	1/1:18,3:19:3:38,3,0	1/1:13,2:15:6.02:211,6,0	./.	0/0:12,0:12:21.07:0,21,1740	0/0:10,0:9:3.01:0,3,93	0/0:19,0:19:30.10:0,30,1871	0/0:7,0:7:12.04:0,12,1062	0/0:12,0:12:24.07:0,24,1417	1/1:15,0:14:3.01:63,3,0	0/0:4,0:4:9.03:0,9,746
chr10	106697386	.	AGAGAGAGAGAGAT	A	723.59	PASS	AB=0.724;AC=7;AF=0.125;AN=56;BaseQRankSum=6.258;DP=386;FS=2.164;HRun=0;HaplotypeScore=138.8184;InbreedingCoeff=0.1995;MQ=56.14;MQ0=11;MQRankSum=-5.956;QD=17.23;ReadPosRankSum=2.864;VQSLOD=2.4793;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:96.71:0,97,4802	1/1:1,4:5:3.55:209,4,0	0/0:12,0:5:14.71:0,15,404	0/0:19,0:10:30.09:0,30,844	0/0:8,0:8:18.53:0,19,926	0/0:15,0:15:11.61:0,12,1686	0/0:12,0:12:27.09:0,27,1614	0/1:4,1:5:10.68:83,0,11	0/0:13,0:13:21.07:0,21,1360	0/0:9,0:9:27.09:0,27,1433	0/0:11,0:11:12.98:0,13,639	0/0:15,0:15:30.10:0,30,1730	0/0:9,0:9:21.07:0,21,777	0/0:14,0:13:15.05:0,15,617	0/0:18,0:17:39.60:0,40,1928	0/0:8,0:8:18.06:0,18,802	0/0:25,0:25:68.04:0,68,2973	0/0:23,0:23:63.20:0,63,2934	0/1:4,2:4:16.10:183,0,16	0/1:2,5:7:16.55:100,0,17	0/1:8,3:8:3.49:18,0,3	0/0:16,0:16:25.48:0,25,831	0/0:12,0:12:21.07:0,21,888	0/0:32,0:32:84.29:0,84,4502	0/0:11,0:11:30.09:0,30,1538	0/0:16,0:16:47.74:0,48,1972	0/1:4,4:7:26.07:257,0,26	0/0:5,0:5:15.05:0,15,643
chr10	106697406	.	G	GT	475.22	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.023;DP=339;FS=14.670;HRun=0;HaplotypeScore=61.4767;InbreedingCoeff=0.8240;MQ=76.85;MQ0=3;MQRankSum=-6.244;QD=7.31;ReadPosRankSum=-2.574;VQSLOD=1.1869;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1269	1/1:1,4:5:6.77:38,7,0	0/0:12,0:11:21.65:0,22,356	0/0:19,0:15:42.06:0,42,508	0/0:10,0:10:27.08:0,27,359	0/0:9,0:9:27.07:0,27,345	0/0:11,0:11:30.06:0,30,380	1/1:14,2:16:34.77:248,35,0	0/0:10,0:10:24.08:0,24,332	0/0:12,0:12:36.12:0,36,490	0/0:4,0:4:9.03:0,9,126	0/0:13,0:13:39.13:0,39,539	0/0:4,0:4:12.04:0,12,167	0/0:3,0:3:9.03:0,9,126	0/0:13,0:13:36.11:0,36,488	0/0:7,0:7:21.05:0,21,266	0/0:18,0:18:54.18:0,54,752	0/0:14,0:14:39.13:0,39,544	1/1:6,2:7:0.67:66,1,0	1/1:3,5:8:3.93:50,4,0	1/1:16,4:19:14.47:165,14,0	0/0:7,0:7:21.04:0,21,256	0/0:10,0:10:30.10:0,30,419	0/0:29,0:29:84.27:0,84,1150	0/0:12,0:12:27.06:0,27,374	0/0:15,0:15:45.13:0,45,592	1/1:4,3:8:4.04:66,4,0	0/0:7,0:7:21.07:0,21,290
chr10	106698877	.	TAC	T	280.15	PASS	AB=0.925;AC=18;AF=0.346;AN=52;BaseQRankSum=7.629;DP=564;FS=7.674;HRun=0;HaplotypeScore=81.3978;InbreedingCoeff=0.1953;MQ=65.17;MQ0=4;MQRankSum=-3.431;QD=1.06;ReadPosRankSum=1.049;VQSLOD=0.1028;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,2:33:41.36:41,0,347	1/1:11,0:7:8.52:42,9,0	./.	0/0:29,0:21:3.01:0,3,33	0/0:23,0:23:21.06:0,21,286	0/0:20,0:20:30.07:0,30,396	0/1:22,1:23:6.18:6,0,326	./.	0/1:18,2:20:29.41:29,0,395	0/1:19,3:21:42.53:43,0,228	0/1:14,1:14:12.23:12,0,218	0/0:14,0:15:0.88:0,1,143	0/0:20,1:21:2.84:0,3,440	0/1:9,1:10:24.25:24,0,82	0/0:20,0:20:27.09:0,27,405	0/0:13,0:13:24.08:0,24,350	0/1:29,3:32:18.46:18,0,520	0/0:20,0:20:21.04:0,21,284	1/1:15,0:14:8.52:42,9,0	1/1:17,0:15:8.52:42,9,0	1/1:31,0:31:5.68:28,6,0	0/0:17,0:17:24.08:0,24,362	0/0:11,0:10:15.05:0,15,226	0/0:38,2:40:38.78:0,39,832	0/1:16,1:17:22.15:22,0,226	0/0:27,0:26:23.96:0,24,317	1/1:16,0:16:19.88:98,20,0	0/0:12,0:10:12.04:0,12,174
chr10	106698902	.	ACACACACACACACTCC	A	3737.31	PASS	AB=0.567;AC=11;AF=0.196;AN=56;BaseQRankSum=10.864;DP=657;FS=5.396;HRun=0;HaplotypeScore=243.0248;InbreedingCoeff=0.8461;MQ=59.08;MQ0=9;MQRankSum=-0.281;QD=29.20;ReadPosRankSum=0.653;VQSLOD=2.2329;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:81.28:0,81,4491	1/1:6,9:11:12.04:435,12,0	0/0:27,0:12:29.41:0,29,862	0/0:35,0:17:40.01:0,40,1419	0/0:21,0:19:54.18:0,54,2572	0/0:25,0:25:64.06:0,64,3465	0/0:29,0:29:69.21:0,69,3670	1/1:5,18:23:50.36:801,50,0	0/0:21,0:20:60.19:0,60,3415	0/0:25,0:24:67.78:0,68,3219	0/0:14,0:13:33.06:0,33,1679	0/0:22,0:22:63.16:0,63,3104	0/0:25,0:25:69.22:0,69,3901	0/0:14,0:14:39.12:0,39,1712	0/0:24,0:24:69.24:0,69,3586	0/0:17,0:17:51.11:0,51,2651	0/0:36,0:36:99:0,101,5740	0/0:21,0:21:60.21:0,60,3247	0/1:4,13:16:54.52:817,0,55	1/1:3,11:12:12:441,12,0	1/1:8,30:38:6.02:280,6,0	0/0:22,0:22:57.18:0,57,3213	0/0:11,0:10:27.08:0,27,1455	0/0:44,0:44:99:0,122,7051	0/0:24,0:23:54.18:0,54,2864	0/0:26,0:26:75.21:0,75,3598	1/1:2,19:21:21.32:962,21,0	0/0:14,0:12:36.03:0,36,1563
chr10	106702011	.	AACACAC	A	254.16	PASS	AB=0.849;AC=9;AF=0.173;AN=52;BaseQRankSum=3.024;DP=543;FS=3.410;HRun=0;HaplotypeScore=113.2776;InbreedingCoeff=0.2605;MQ=61.97;MQ0=13;MQRankSum=-0.886;QD=2.42;ReadPosRankSum=-1.001;VQSLOD=2.2414;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:43:47.94:0,48,1139	0/1:3,3:7:51.67:54,0,52	./.	./.	0/0:6,0:6:6.02:0,6,136	0/0:14,0:13:18.06:0,18,514	0/0:26,0:26:3.08:0,3,531	0/0:18,0:18:3.01:0,3,33	0/0:23,0:23:6.02:0,6,155	0/1:22,1:22:42.47:42,0,374	0/0:16,0:16:21.05:0,21,505	0/0:10,0:17:2.56:0,3,55	0/0:14,0:14:3.01:0,3,97	0/0:18,0:18:21.05:0,21,425	0/0:22,0:25:39.12:0,39,916	0/0:15,0:18:21.07:0,21,640	0/0:15,0:16:32.29:0,32,672	0/0:20,0:23:35.32:0,35,1090	1/1:9,0:8:2.97:20,3,0	1/1:12,5:17:3.01:61,3,0	0/1:38,2:40:24.97:92,0,25	0/0:20,0:25:29.15:0,29,617	0/0:10,0:9:3.01:0,3,49	0/0:30,0:29:35.18:0,35,752	0/0:14,0:15:21.07:0,21,570	0/0:24,0:24:33.06:0,33,664	1/1:4,5:9:5.72:114,6,0	0/0:5,0:6:8.12:0,8,89
chr10	106702907	.	T	TA	2568.88	PASS	AB=0.786;AC=12;AF=0.214;AN=56;BaseQRankSum=-7.388;DP=509;FS=12.581;HRun=10;HaplotypeScore=59.4716;InbreedingCoeff=0.7939;MQ=60.96;MQ0=5;MQRankSum=-2.719;QD=19.31;ReadPosRankSum=-3.300;VQSLOD=2.4390;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:59.88:0,60,482	1/1:1,5:6:18.01:181,18,0	0/1:16,0:9:2.54:3,0,61	0/0:15,0:12:9.43:0,9,115	0/0:27,0:27:65.92:0,66,541	0/0:17,0:17:41.91:0,42,341	0/0:10,0:10:23.91:0,24,190	1/1:4,35:37:95.95:931,96,0	0/0:0,0:20:31.41:0,31,91	0/0:24,0:24:44.91:0,45,369	0/0:21,0:21:55.96:0,56,446	0/0:12,0:11:26.96:0,27,221	0/0:16,0:16:41.95:0,42,345	0/0:12,0:13:20.96:0,21,172	0/0:16,0:16:41.25:0,41,344	0/0:12,0:12:26.95:0,27,218	0/0:22,0:22:46.48:0,46,425	0/0:14,0:14:29.96:0,30,246	1/1:4,16:20:48.10:498,48,0	1/1:4,21:24:54.07:561,54,0	0/1:1,3:4:13.62:55,0,14	0/0:3,0:3:5.99:0,6,49	0/0:12,0:13:23.97:0,24,197	0/0:15,0:15:35.96:0,36,295	0/0:16,0:15:41.94:0,42,345	0/0:39,0:38:99:0,105,843	1/1:3,20:22:29.50:518,29,0	0/0:23,0:22:47.90:0,48,389
chr10	106703277	.	TA	T	2044.05	PASS	AB=0.919;AC=13;AF=0.232;AN=56;BaseQRankSum=10.178;DP=694;FS=12.584;HRun=12;HaplotypeScore=76.7667;InbreedingCoeff=0.8967;MQ=65.03;MQ0=3;MQRankSum=0.613;QD=11.82;ReadPosRankSum=0.614;VQSLOD=2.0085;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:38:80.80:0,81,775	1/1:0,7:8:22.96:168,23,0	0/0:21,0:14:14.16:0,14,103	0/0:32,0:19:15.20:0,15,122	0/0:28,2:32:34.36:0,34,671	0/0:21,0:22:47.89:0,48,453	0/0:20,3:24:33.67:0,34,484	1/1:8,16:24:43.86:329,44,0	0/0:16,0:14:38.61:0,39,350	0/0:27,0:27:60.10:0,60,596	0/0:16,0:16:38.86:0,39,363	0/0:30,0:30:81.09:0,81,786	0/0:22,0:22:51.10:0,51,518	0/0:23,0:23:54.10:0,54,544	0/0:17,2:19:12.84:0,13,312	0/0:23,0:23:48.09:0,48,482	0/0:20,0:20:54.11:0,54,548	0/1:31,3:34:9.35:9,0,577	1/1:4,15:20:19.40:322,19,0	1/1:4,25:30:69.77:522,70,0	1/1:5,22:27:50.80:395,51,0	0/0:27,1:28:49.58:0,50,657	0/0:15,0:15:30.03:0,30,287	0/0:35,1:36:36.20:0,36,709	0/0:19,0:20:56.95:0,57,562	0/0:34,0:35:86.99:0,87,854	1/1:5,25:30:62.73:487,63,0	0/0:17,0:17:30.06:0,30,304
chr10	106703642	.	C	CA	3233.06	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.660;DP=627;FS=3.278;HRun=0;HaplotypeScore=108.7308;InbreedingCoeff=0.9996;MQ=91.54;MQ0=0;MQRankSum=-13.386;QD=26.50;ReadPosRankSum=-0.610;VQSLOD=3.8534;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1618	1/1:4,4:8:23.99:217,24,0	0/0:26,0:26:72.24:0,72,998	0/0:29,0:29:75.24:0,75,1016	0/0:19,0:19:54.18:0,54,754	0/0:24,0:24:69.23:0,69,959	0/0:26,0:26:78.18:0,78,1002	1/1:3,22:25:69.12:687,69,0	1/1:1,19:20:60.08:576,60,0	0/0:21,0:21:63.21:0,63,878	0/0:14,0:14:42.14:0,42,580	0/0:29,0:29:84.24:0,84,1151	0/0:18,0:18:54.18:0,54,755	0/0:16,0:16:45.15:0,45,629	0/0:29,0:29:87.29:0,87,1213	0/0:26,0:26:78.26:0,78,1089	0/0:39,0:39:99:0,117,1616	0/0:17,0:17:51.17:0,51,711	1/1:4,13:17:51.09:524,51,0	1/1:1,15:16:48.07:470,48,0	1/1:4,15:19:48.06:476,48,0	0/0:22,0:22:66.21:0,66,904	0/0:15,0:15:42.12:0,42,569	0/0:25,0:24:75.25:0,75,1049	0/0:23,0:23:66.22:0,66,921	0/0:30,0:30:90.27:0,90,1221	1/1:1,15:16:51.04:483,51,0	0/0:18,0:18:51.08:0,51,655
chr10	106703643	.	C	CA	3549.41	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=18.655;DP=685;FS=15.064;HRun=0;HaplotypeScore=151.2490;InbreedingCoeff=0.9999;MQ=87.34;MQ0=0;MQRankSum=-17.986;QD=19.50;ReadPosRankSum=-2.671;VQSLOD=3.3800;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1585	1/1:8,2:12:29.88:197,30,0	0/0:27,0:27:75.12:0,75,983	0/0:27,0:27:74.52:0,75,948	0/0:20,0:20:57.18:0,57,774	0/0:24,0:24:68.97:0,69,932	0/0:22,0:22:66.17:0,66,881	1/1:20,22:42:99:961,125,0	1/1:7,9:26:76.10:508,76,0	0/0:22,0:22:63.17:0,63,841	0/0:14,0:14:42.13:0,42,556	0/0:29,0:29:87.09:0,87,1151	0/0:19,0:19:54.18:0,54,751	0/0:16,0:16:48.13:0,48,649	0/0:29,0:29:87.24:0,87,1175	0/0:28,0:28:78.25:0,78,1073	0/0:39,0:39:99:0,117,1596	0/0:17,0:17:51.17:0,51,708	1/1:13,7:26:64.55:481,65,0	1/1:9,8:25:73.57:511,74,0	1/1:8,14:23:47.09:384,47,0	0/0:22,0:22:63.17:0,63,855	0/0:15,0:15:42.09:0,42,560	0/0:25,0:24:75.25:0,75,1047	0/0:23,0:23:69.20:0,69,938	0/0:30,0:30:90.10:0,90,1165	1/1:13,7:27:78.80:508,79,0	0/0:15,0:15:42.04:0,42,556
chr10	106704259	.	GTGTGTGTGTA	G	1111.75	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=1.568;DP=548;FS=3.694;HRun=0;HaplotypeScore=159.7306;InbreedingCoeff=0.1190;MQ=66.81;MQ0=6;MQRankSum=-4.856;QD=10.02;ReadPosRankSum=2.052;VQSLOD=2.6550;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:60.96:0,61,1729	0/1:6,0:6:42.93:43,0,92	0/0:27,0:24:40.24:0,40,413	0/0:22,0:15:32.83:0,33,313	0/0:18,0:18:39.02:0,39,900	0/0:20,0:20:44.72:0,45,1224	0/0:23,0:23:55.47:0,55,1405	0/1:16,0:16:99:166,0,201	1/1:2,19:21:21.03:661,21,0	0/0:18,0:18:50.97:0,51,948	0/0:4,0:4:6.01:0,6,180	0/0:18,0:18:38.97:0,39,664	0/0:23,0:22:51.09:0,51,1734	0/0:12,0:12:35.91:0,36,1235	0/0:21,0:21:27.06:0,27,1283	0/0:17,0:17:48.05:0,48,1541	0/0:37,0:36:84.15:0,84,3131	0/0:25,0:25:62.71:0,63,1577	0/1:17,0:16:92.64:93,0,571	0/1:9,0:9:17.96:18,0,20	0/1:33,0:31:99:262,0,201	0/0:12,0:12:24.48:0,24,531	0/0:15,0:15:24:0,24,907	0/0:38,0:38:87.16:0,87,3135	0/0:8,0:8:18:0,18,449	0/0:33,0:33:71.71:0,72,1903	0/1:9,0:9:8.45:8,0,404	0/0:5,0:5:14.99:0,15,247
chr10	106704368	.	TCACTC	T	3005.84	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.036;DP=395;FS=0.000;HRun=0;HaplotypeScore=78.5652;InbreedingCoeff=0.9009;MQ=82.18;MQ0=0;MQRankSum=-7.841;QD=43.56;ReadPosRankSum=0.448;VQSLOD=3.2997;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.26:0,87,2658	1/1:0,2:2:3.01:67,3,0	0/0:17,0:17:47.52:0,48,1297	0/0:18,0:18:48.16:0,48,1345	0/0:7,0:7:21.07:0,21,645	0/0:15,0:15:45.14:0,45,1378	0/0:32,0:32:96.29:0,96,2981	1/1:0,12:12:36.11:760,36,0	0/0:14,0:14:42.10:0,42,1232	0/0:8,0:8:24.08:0,24,760	0/0:1,0:1:3.01:0,3,79	0/0:20,0:20:60.21:0,60,1927	0/0:6,0:6:18.06:0,18,581	0/0:10,0:10:30.10:0,30,922	0/0:12,0:12:36.11:0,36,1085	0/0:14,0:14:42.14:0,42,1356	0/0:32,0:32:93.29:0,93,2831	0/0:22,0:22:66.23:0,66,1987	1/1:0,8:8:21.03:414,21,0	1/1:0,9:9:27.05:554,27,0	1/1:3,27:30:41.86:924,42,0	0/0:8,0:8:24.08:0,24,773	0/0:5,0:5:15.05:0,15,483	0/0:27,0:27:78.25:0,78,2342	0/0:12,0:12:33.11:0,33,1017	0/0:13,0:13:39.12:0,39,1143	1/1:0,8:8:21.07:465,21,0	0/0:2,0:2:6.02:0,6,194
chr10	106705018	.	T	TGC	851.46	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.340;DP=669;FS=20.234;HRun=0;HaplotypeScore=124.0871;InbreedingCoeff=0.8722;MQ=54.38;MQ0=5;MQRankSum=1.239;QD=34.06;ReadPosRankSum=2.974;VQSLOD=4.2014;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,1751	0/0:10,0:10:12.04:0,12,166	0/0:32,0:10:17.21:0,17,254	0/0:43,0:16:43.10:0,43,490	0/0:17,0:17:51.13:0,51,698	0/0:17,0:17:51.17:0,51,777	0/0:26,0:26:72.05:0,72,1048	0/0:27,0:27:81.06:0,81,900	1/1:8,17:25:54.07:946,54,0	0/0:19,0:19:54.13:0,54,712	0/0:10,0:10:30.10:0,30,454	0/0:25,0:25:69.21:0,69,1028	0/0:18,0:18:51.11:0,51,680	0/0:23,0:22:60.18:0,60,865	0/0:22,0:21:63.14:0,63,869	0/0:21,0:21:63.19:0,63,905	0/0:45,0:44:99:0,123,1738	0/0:28,0:26:81.13:0,81,1104	0/0:27,0:27:64.55:0,65,702	0/0:12,0:12:6.02:0,6,77	0/0:53,0:52:38.18:0,38,516	0/0:14,0:14:42.14:0,42,633	0/0:13,0:13:33.08:0,33,455	0/0:32,0:32:93.27:0,93,1339	0/0:12,0:12:36.09:0,36,497	0/0:18,0:18:54.16:0,54,753	0/0:18,0:18:45.09:0,45,578	0/0:19,0:19:54.15:0,54,797
chr10	106705024	.	TGCGC	T	3230.05	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.866;DP=659;FS=2.221;HRun=0;HaplotypeScore=135.9010;InbreedingCoeff=0.9636;MQ=53.51;MQ0=6;MQRankSum=-5.183;QD=24.10;ReadPosRankSum=0.373;VQSLOD=3.3132;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,111,2722	1/1:3,8:11:11.88:187,12,0	0/0:35,1:11:17.78:0,18,198	0/0:42,0:12:12:0,12,207	0/0:14,0:14:39.13:0,39,1022	0/0:17,0:17:48.16:0,48,1256	0/0:26,0:26:69.24:0,69,1727	1/1:7,13:20:51.16:860,51,0	0/0:21,0:24:50.53:0,51,394	0/0:15,0:15:36.12:0,36,875	0/0:10,0:10:30.10:0,30,746	0/0:28,0:28:75.26:0,75,1802	0/0:17,0:17:39.13:0,39,917	0/0:24,0:23:57.15:0,57,1245	0/0:22,0:21:57.20:0,57,1413	0/0:20,0:20:45.11:0,45,1078	0/0:44,0:43:99:0,114,2617	0/0:27,0:25:75.05:0,75,1677	1/1:7,16:23:57.06:866,57,0	1/1:0,11:12:6.02:110,6,0	1/1:5,44:48:32.21:606,32,0	0/0:14,0:14:42.13:0,42,1053	0/0:15,0:15:36.12:0,36,777	0/0:34,0:34:99:0,99,2474	0/0:11,0:11:33.11:0,33,828	0/0:21,0:21:54.18:0,54,1238	1/1:3,16:19:45.14:782,45,0	0/0:18,0:18:51.18:0,51,1314
chr10	106705061	.	ATGTGTG	A	2424.21	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.570;DP=700;FS=5.791;HRun=0;HaplotypeScore=167.2522;InbreedingCoeff=0.9174;MQ=50.93;MQ0=12;MQRankSum=-3.607;QD=14.60;ReadPosRankSum=-2.752;VQSLOD=2.4892;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:45:96.33:0,96,2809	1/1:1,9:11:2.74:30,3,0	0/0:57,0:18:28.64:0,29,785	0/0:61,0:17:40.08:0,40,974	0/0:9,0:9:24.08:0,24,710	0/0:20,0:21:51.17:0,51,1609	0/0:25,0:26:56.18:0,56,1849	1/1:9,18:23:48.14:926,48,0	1/1:10,17:27:18.04:319,18,0	0/0:10,0:10:24.08:0,24,727	0/0:10,0:11:21.07:0,21,627	0/0:28,0:29:69.24:0,69,2227	0/0:14,0:16:42.13:0,42,1265	0/0:23,0:24:69.24:0,69,2171	0/0:26,0:25:63.22:0,63,2005	0/0:21,1:23:66.23:0,66,1969	0/0:37,0:39:94.24:0,94,2829	0/0:24,0:24:69.23:0,69,2094	1/1:10,11:21:33.11:663,33,0	1/1:2,8:10:9.03:166,9,0	1/1:36,16:51:3.77:181,4,0	0/0:14,0:14:33.11:0,33,1098	0/0:16,0:15:42.13:0,42,1279	0/0:36,0:36:99:0,102,3091	0/0:12,0:14:28.10:0,28,952	0/0:19,0:20:45.15:0,45,1350	1/1:9,8:17:15.05:320,15,0	0/0:10,0:9:18.06:0,18,604
chr10	106705316	.	AAAATAAAT	A	676.26	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=4.253;DP=279;FS=4.470;HRun=0;HaplotypeScore=69.3060;InbreedingCoeff=0.6152;MQ=62.48;MQ0=2;MQRankSum=-3.266;QD=10.25;ReadPosRankSum=-1.719;VQSLOD=1.3715;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:21.07:0,21,776	1/1:3,1:4:3.01:75,3,0	./.	./.	0/0:14,0:14:9.03:0,9,344	0/0:9,0:9:21.07:0,21,835	0/0:10,0:10:12.04:0,12,426	1/1:19,0:18:3.01:52,3,0	0/0:3,0:6:8.98:0,9,73	0/0:6,0:6:6.02:0,6,208	0/0:8,0:8:12.04:0,12,477	0/0:12,0:12:9.03:0,9,368	0/0:4,0:4:9.03:0,9,368	0/0:5,0:5:6.02:0,6,190	0/0:8,0:8:9.03:0,9,368	0/0:7,0:7:12.04:0,12,468	0/0:24,0:23:36.12:0,36,1373	0/0:21,0:21:39.13:0,39,1516	1/1:9,3:11:12.04:279,12,0	1/1:7,2:9:3.01:75,3,0	1/1:6,3:9:5.94:117,6,0	0/0:7,0:7:3.01:0,3,123	0/0:2,0:2:3.01:0,3,99	0/0:6,0:6:6.02:0,6,246	0/0:8,0:8:15.05:0,15,613	0/0:5,0:5:3.01:0,3,123	1/1:8,5:13:9.03:224,9,0	0/0:12,0:12:30.07:0,30,1031
chr10	106705783	.	AAAACC	A	1506.50	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=5.758;DP=546;FS=3.582;HRun=0;HaplotypeScore=102.1987;InbreedingCoeff=0.9105;MQ=64.70;MQ0=3;MQRankSum=-0.852;QD=17.32;ReadPosRankSum=-1.167;VQSLOD=3.2179;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:75.26:0,75,2044	0/0:6,0:6:12.03:0,12,277	./.	0/0:24,0:18:1.25:0,1,3	0/0:20,0:20:24.07:0,24,608	0/0:16,0:16:24.55:0,25,570	0/0:27,0:27:36.09:0,36,859	1/1:18,0:18:11.28:125,11,0	0/0:10,0:16:18.04:0,18,315	0/0:20,0:19:33.10:0,33,796	0/0:21,0:21:25.29:0,25,519	0/0:17,0:16:36.11:0,36,939	0/0:22,0:22:39.11:0,39,935	0/0:16,0:16:24.07:0,24,604	0/0:17,0:17:33.10:0,33,844	0/0:10,0:10:15.05:0,15,418	0/0:37,0:37:66.19:0,66,1610	0/0:26,0:26:42.14:0,42,1156	1/1:9,5:14:15.01:235,15,0	1/1:9,5:14:21.05:346,21,0	1/1:15,19:34:42.14:752,42,0	0/0:11,0:11:21.02:0,21,435	0/0:9,0:9:9.03:0,9,251	0/0:43,0:42:99:0,120,3165	0/0:7,0:7:15.05:0,15,419	0/0:19,0:19:30.08:0,30,775	1/1:1,6:7:12.04:215,12,0	0/0:15,0:14:27.09:0,27,752
chr10	106706604	.	G	GA	2598.69	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=3.620;DP=581;FS=2.762;HRun=7;HaplotypeScore=59.9321;InbreedingCoeff=0.9972;MQ=61.43;MQ0=2;MQRankSum=-2.239;QD=24.75;ReadPosRankSum=-1.641;VQSLOD=3.4044;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1043	1/1:0,10:10:24.07:290,24,0	0/0:9,0:8:20.82:0,21,178	0/0:15,0:11:24.49:0,24,227	0/0:30,0:30:60.07:0,60,579	0/0:20,0:20:45.06:0,45,434	0/0:28,0:28:81.13:0,81,781	1/1:2,13:15:39.12:470,39,0	0/0:15,0:15:42.06:0,42,405	0/0:29,0:29:84.10:0,84,801	0/0:13,0:13:30.05:0,30,289	0/0:27,0:27:75.12:0,75,723	0/0:10,0:10:30.05:0,30,289	0/0:20,0:20:54.09:0,54,521	0/0:23,0:22:63.10:0,63,608	0/0:13,0:13:39.06:0,39,376	0/0:30,0:30:87.11:0,87,832	0/0:31,0:31:84.13:0,84,811	1/1:2,17:18:48.15:580,48,0	1/1:3,8:11:21.06:254,21,0	1/1:6,21:27:48.15:580,48,0	0/0:11,0:11:33.05:0,33,316	0/0:23,0:23:57.08:0,57,549	0/0:15,0:15:45:0,45,413	0/0:26,0:26:63.07:0,63,600	0/0:26,0:26:72.11:0,72,694	1/1:5,18:21:51.16:614,51,0	0/0:24,0:24:69.11:0,69,666
chr10	106707311	.	C	CCTCT	690.75	PASS	AB=0.927;AC=19;AF=0.352;AN=54;BaseQRankSum=3.014;DP=607;FS=34.722;HRun=0;HaplotypeScore=131.5249;InbreedingCoeff=0.4852;MQ=64.47;MQ0=21;MQRankSum=-2.337;QD=2.94;ReadPosRankSum=-4.517;VQSLOD=-0.7305;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:43:29.89:40,0,30	1/1:7,0:7:3.48:53,3,0	./.	0/0:54,0:23:2.74:0,3,12	0/0:14,0:15:9.03:0,9,136	0/0:19,0:19:6.02:0,6,89	0/0:24,0:25:20.50:0,20,256	1/1:24,0:24:12.32:115,12,0	1/1:14,6:22:13.07:232,13,0	0/0:20,0:19:5.93:0,6,113	0/0:12,0:14:9.02:0,9,119	0/0:18,0:18:17.36:0,17,255	0/0:11,0:10:9.65:0,10,107	1/1:15,0:15:9.03:183,9,0	0/0:25,0:25:26.95:0,27,377	0/0:19,0:19:21.01:0,21,275	0/1:19,0:19:22.99:23,0,192	0/0:18,0:18:18.57:0,19,290	1/1:18,0:16:3.75:23,4,0	0/0:21,0:21:5.44:0,5,30	1/1:25,0:24:0.89:2,1,0	0/0:18,0:18:12:0,12,157	0/1:20,0:20:31.86:32,0,37	0/0:19,0:19:18.05:0,18,260	0/0:17,0:17:17.48:0,17,202	0/0:18,0:19:6.01:0,6,74	1/1:19,0:18:9.92:151,10,0	1/1:22,0:19:0.94:2,1,0
chr10	106707362	.	C	CT	693.22	PASS	AB=0.738;AC=6;AF=0.107;AN=56;BaseQRankSum=7.880;DP=643;FS=0.000;HRun=1;HaplotypeScore=96.4677;InbreedingCoeff=-0.0769;MQ=47.39;MQ0=32;MQRankSum=-6.071;QD=6.42;ReadPosRankSum=-3.233;VQSLOD=-0.6625;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:90.15:0,90,1103	0/1:4,2:6:34.51:38,0,35	0/0:61,0:12:25.66:0,26,275	0/0:75,0:13:27.08:0,27,333	0/0:21,0:20:45.13:0,45,569	0/0:14,0:14:25.21:0,25,418	0/0:20,0:20:54.17:0,54,700	0/1:28,7:32:99:287,0,594	0/0:37,0:37:93.21:0,93,1158	0/0:21,0:21:60.11:0,60,731	0/0:12,0:12:33.10:0,33,408	0/0:28,0:28:81.09:0,81,994	0/0:11,0:11:31.33:0,31,378	0/0:22,0:22:51.04:0,51,647	0/0:18,0:18:54.12:0,54,655	0/0:16,0:16:45.08:0,45,563	0/0:19,0:19:51.64:0,52,657	0/0:14,1:15:39.01:0,39,462	0/1:9,2:9:48.80:49,0,205	0/1:14,7:21:55.90:155,0,56	0/1:6,10:14:8.42:32,0,8	0/0:16,0:16:36.12:0,36,467	0/0:18,0:17:39.11:0,39,491	0/0:26,0:25:63.12:0,63,795	0/0:12,0:12:27.97:0,28,351	0/0:21,0:21:60.15:0,60,759	0/1:8,11:19:99:258,0,142	0/0:12,0:11:33.11:0,33,428
chr10	106707369	.	C	CT	2004.67	PASS	AB=0.671;AC=7;AF=0.125;AN=56;BaseQRankSum=7.580;DP=657;FS=0.000;HRun=1;HaplotypeScore=94.0951;InbreedingCoeff=0.0968;MQ=52.30;MQ0=32;MQRankSum=-7.110;QD=18.22;ReadPosRankSum=-3.663;VQSLOD=2.6818;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:99:0,100,1204	0/1:4,2:6:28.40:121,0,28	0/0:65,0:16:35.19:0,35,382	0/0:86,0:18:37.05:0,37,399	0/0:18,0:18:45.08:0,45,563	0/0:15,0:15:35.60:0,36,437	0/0:20,0:20:60.06:0,60,736	0/1:17,18:32:99:609,0,276	0/0:38,0:38:96.23:0,96,1210	0/0:22,0:22:66.20:0,66,834	0/0:15,0:15:39.05:0,39,473	0/0:30,0:30:82.44:0,82,1040	0/0:10,0:10:30.08:0,30,373	0/0:24,0:24:65.55:0,66,785	0/0:16,0:16:48.16:0,48,623	0/0:16,0:16:45.15:0,45,583	0/0:20,0:20:50.86:0,51,658	0/0:13,0:13:39.08:0,39,482	0/1:7,4:9:99:126,0,127	0/1:10,13:23:37.67:462,0,38	1/1:4,11:13:3.34:292,3,0	0/0:13,0:13:36.12:0,36,467	0/0:18,0:17:48.15:0,48,610	0/0:24,0:23:60.20:0,60,778	0/0:12,0:12:24.96:0,25,313	0/0:21,0:21:63.15:0,63,775	0/1:5,15:20:95.37:522,0,95	0/0:11,0:11:33.04:0,33,407
chr10	106707948	.	G	GC	2834.79	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-5.538;DP=529;FS=0.872;HRun=8;HaplotypeScore=52.3825;InbreedingCoeff=0.9271;MQ=69.11;MQ0=0;MQRankSum=-0.367;QD=21.16;ReadPosRankSum=-1.669;VQSLOD=3.0825;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,108,984	1/1:0,5:5:12.04:138,12,0	0/0:8,0:8:14.84:0,15,121	0/0:8,0:8:4.71:0,5,99	0/0:10,0:10:24:0,24,219	0/0:18,0:18:51.03:0,51,467	0/0:20,0:20:51.02:0,51,466	1/1:6,14:19:33.07:361,33,0	1/1:2,0:18:42.61:216,43,0	0/0:22,0:22:60.03:0,60,549	0/0:17,0:18:47.06:0,47,417	0/0:19,0:19:54.01:0,54,489	0/0:19,0:18:45:0,45,407	0/0:25,0:25:54.02:0,54,494	0/0:13,0:13:33.02:0,33,302	0/0:23,0:23:57.02:0,57,522	0/0:34,0:34:99:0,99,906	0/0:25,0:25:60.03:0,60,549	1/1:8,6:15:21.04:229,21,0	1/1:2,11:13:33.08:370,33,0	1/1:0,39:40:99:1177,102,0	0/0:13,0:13:39.02:0,39,357	0/0:11,0:11:33.01:0,33,297	0/0:22,0:22:60.03:0,60,549	0/0:17,0:17:48.03:0,48,440	0/0:18,0:18:36.01:0,36,329	1/1:4,19:23:2.25:532,2,0	0/0:7,0:7:15.01:0,15,137
chr10	106708076	.	ACTCTCTCT	A	618.21	PASS	AB=0.991;AC=9;AF=0.214;AN=42;BaseQRankSum=-0.391;DP=509;FS=26.551;HRun=0;HaplotypeScore=118.0189;InbreedingCoeff=-0.0169;MQ=69.17;MQ0=30;MQRankSum=1.661;QD=4.79;ReadPosRankSum=2.114;VQSLOD=0.2763;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:20:36.25:158,0,36	./.	0/0:41,0:18:0.47:0,0,1	./.	./.	0/1:11,0:11:14.93:90,0,15	./.	0/0:22,0:21:14.23:0,14,130	0/1:14,0:15:32.92:56,0,33	0/0:21,0:21:8.70:0,9,166	./.	0/0:16,0:16:6.88:0,7,63	./.	0/0:10,0:10:3.01:0,3,50	0/1:10,0:9:5.41:27,0,5	0/0:9,0:9:6.02:0,6,95	0/1:21,0:19:28.17:28,0,34	1/1:13,0:13:12.04:284,12,0	0/0:18,0:17:9.03:0,9,263	0/0:12,0:11:0.47:0,0,1	0/0:17,0:14:0.47:0,0,1	0/1:8,0:8:17.93:62,0,18	./.	0/1:30,0:28:12.65:33,0,13	0/0:17,0:17:9:0,9,99	0/0:15,0:15:8.24:0,8,154	0/0:26,0:24:6.02:0,6,152	0/0:19,0:17:2.22:0,2,7
chr10	106708115	.	C	CTTTCTT	250.50	PASS	AB=0.931;AC=6;AF=0.111;AN=54;BaseQRankSum=1.069;DP=481;FS=2.202;HRun=0;HaplotypeScore=92.7850;InbreedingCoeff=0.1352;MQ=35.50;MQ0=99;MQRankSum=-3.689;QD=3.09;ReadPosRankSum=-3.549;VQSLOD=1.0467;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:29:24.87:0,25,529	0/1:5,0:4:45.58:46,0,50	0/0:5,0:1:0.47:0,0,1	0/0:7,0:3:6.02:0,6,80	./.	0/0:10,0:8:11.65:0,12,199	0/0:31,0:24:8.23:0,8,62	0/1:23,0:19:99:137,0,269	0/0:13,0:12:12.92:0,13,161	0/0:21,0:17:47.97:0,48,594	0/0:7,0:6:3:0,3,25	0/0:18,0:16:25.08:0,25,353	0/0:11,0:6:12.04:0,12,176	0/0:15,0:14:8.60:0,9,122	0/0:14,0:10:15.03:0,15,264	0/0:12,0:10:11.46:0,11,194	0/0:23,0:18:42.35:0,42,546	0/0:18,0:14:33.11:0,33,610	0/0:11,0:9:11.43:0,11,268	1/1:13,0:9:6.46:51,6,0	0/1:19,0:10:56.52:57,0,71	0/0:19,0:16:5.66:0,6,118	0/0:17,0:11:5.94:0,6,42	0/0:49,0:37:36.10:0,36,673	0/0:13,0:10:18.05:0,18,272	0/0:16,0:15:44.37:0,44,599	0/1:13,5:17:80.44:80,0,195	0/0:18,0:9:22.08:0,22,219
chr10	106708230	.	C	CACCT	5556.69	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-6.871;DP=445;FS=10.358;HRun=0;HaplotypeScore=89.8503;InbreedingCoeff=0.9857;MQ=98.08;MQ0=0;MQRankSum=-8.618;QD=56.70;ReadPosRankSum=-0.923;VQSLOD=5.4691;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:48.12:0,48,782	1/1:0,7:7:21.07:557,21,0	0/0:21,0:21:63.21:0,63,1131	0/0:33,0:33:91.51:0,92,1545	0/0:6,0:6:18.06:0,18,329	0/0:18,0:18:51.17:0,51,944	0/0:26,0:26:78.27:0,78,1438	1/1:4,2:7:18.06:418,18,0	0/0:14,0:14:33.11:0,33,616	0/0:20,0:20:60.20:0,60,1093	0/0:11,0:11:33.11:0,33,608	0/0:18,0:18:51.17:0,51,944	0/0:13,0:13:36.12:0,36,671	0/0:16,0:16:48.16:0,48,896	0/0:12,0:12:33.11:0,33,598	0/0:12,0:12:36.12:0,36,671	0/0:18,0:18:48.15:0,48,864	0/0:17,0:17:51.17:0,51,934	1/1:8,12:21:57.19:1293,57,0	1/1:1,10:13:30.10:772,30,0	1/1:4,30:35:65.91:1703,66,0	0/0:9,0:9:24.08:0,24,448	0/0:8,0:8:15.05:0,15,280	0/0:24,0:24:69.24:0,69,1274	0/0:13,0:13:39.13:0,39,728	0/0:15,0:15:42.14:0,42,776	1/1:4,9:14:32.90:813,33,0	0/0:4,0:4:12.03:0,12,193
chr10	106709448	.	CTATGTATG	C	508.13	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=4.258;DP=779;FS=7.590;HRun=0;HaplotypeScore=208.9950;InbreedingCoeff=0.9825;MQ=73.47;MQ0=9;MQRankSum=-3.927;QD=20.33;ReadPosRankSum=-0.059;VQSLOD=1.9957;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:36:51.14:0,51,1716	0/0:13,0:13:21.04:0,21,579	./.	./.	0/0:20,0:20:33.10:0,33,1183	0/0:23,0:23:36.11:0,36,1270	0/0:25,0:25:33.05:0,33,942	0/0:45,0:44:32.84:0,33,346	1/1:17,7:25:27.09:602,27,0	0/0:37,0:38:69.17:0,69,2147	0/0:20,0:20:48.12:0,48,1540	0/0:50,0:52:93.25:0,93,3248	0/0:26,0:26:42.14:0,42,1574	0/0:34,0:33:39.10:0,39,1326	0/0:39,0:39:45.15:0,45,1742	0/0:23,0:23:33.11:0,33,1203	0/0:15,0:15:24.07:0,24,743	0/0:25,0:25:42.12:0,42,1451	0/0:20,0:20:21.06:0,21,628	0/0:26,0:26:33.11:0,33,1049	0/0:43,0:43:66.14:0,66,1904	0/0:21,0:21:21.06:0,21,610	0/0:18,0:18:30.07:0,30,927	0/0:21,0:21:33.11:0,33,1286	0/0:25,0:25:51.14:0,51,1828	0/0:28,0:30:60.12:0,60,1841	0/0:25,0:25:51.06:0,51,1401	0/0:15,0:16:33.07:0,33,995
chr10	106709520	.	ATATG	A	949.40	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.552;DP=911;FS=3.102;HRun=0;HaplotypeScore=172.3709;InbreedingCoeff=0.9999;MQ=58.96;MQ0=1;MQRankSum=-0.179;QD=32.74;ReadPosRankSum=2.047;VQSLOD=3.9677;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,126,3227	0/0:13,0:13:39.13:0,39,992	0/0:47,0:34:75.18:0,75,1661	0/0:50,0:34:78.26:0,78,1795	0/0:26,0:26:78.25:0,78,1932	0/0:24,0:24:66.20:0,66,1650	0/0:24,0:25:69.69:0,70,1706	0/0:40,0:40:99:0,102,2087	1/1:2,27:29:57.15:1044,57,0	0/0:53,0:53:99:0,147,3708	0/0:20,0:20:54.19:0,54,1356	0/0:54,0:53:99:0,148,3727	0/0:34,0:34:87.30:0,87,2175	0/0:39,0:39:99:0,111,2740	0/0:39,0:39:99:0,117,2984	0/0:38,0:38:99:0,108,2759	0/0:25,0:24:66.23:0,66,1658	0/0:25,0:25:72.19:0,72,1781	0/0:15,0:15:45.15:0,45,1104	0/0:21,0:21:54.19:0,54,1396	0/0:68,0:68:99:0,189,4752	0/0:19,0:19:57.20:0,57,1503	0/0:16,0:16:48.16:0,48,1190	0/0:38,0:38:93.28:0,93,2358	0/0:31,0:31:81.26:0,81,2054	0/0:36,0:36:99:0,102,2528	0/0:26,0:26:69.24:0,69,1780	0/0:14,0:14:42.14:0,42,1108
chr10	106709606	.	ATGTG	A	1558.41	PASS	AB=0.933;AC=14;AF=0.269;AN=52;BaseQRankSum=4.309;DP=795;FS=1.966;HRun=0;HaplotypeScore=134.7616;InbreedingCoeff=0.5720;MQ=54.12;MQ0=18;MQRankSum=0.087;QD=6.55;ReadPosRankSum=-1.025;VQSLOD=2.2900;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:40:43.50:0,44,625	1/1:8,8:17:24:307,24,0	./.	./.	0/1:14,3:18:77.84:107,0,78	0/0:25,0:25:39.07:0,39,671	0/0:30,0:34:46.23:0,46,876	0/1:44,1:40:59.56:212,0,60	0/0:25,0:28:32.84:0,33,343	0/1:29,0:30:0.92:1,0,604	0/0:20,0:20:21:0,21,345	0/0:50,0:52:77.59:0,78,1337	0/0:29,0:30:9.14:0,9,974	0/0:23,0:25:41.84:0,42,747	0/0:31,0:32:65.86:0,66,1230	0/0:16,0:16:23.79:0,24,442	0/0:38,0:37:60.11:0,60,1226	0/0:17,0:17:31.92:0,32,718	1/1:12,7:16:1.74:204,2,0	1/1:11,10:21:8.84:143,9,0	1/1:24,16:39:21.03:334,21,0	0/0:22,0:25:50.53:0,51,816	0/0:10,0:9:12.01:0,12,183	0/0:35,0:39:74.68:0,75,1516	0/0:26,0:26:51.14:0,51,1091	0/1:29,1:30:11.70:12,0,467	1/1:6,12:18:27.09:406,27,0	0/0:16,0:16:26.96:0,27,571
chr10	106711331	.	C	CTCTG	1359.78	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=0.332;DP=659;FS=11.430;HRun=0;HaplotypeScore=124.7182;InbreedingCoeff=0.8475;MQ=65.14;MQ0=2;MQRankSum=-2.926;QD=10.62;ReadPosRankSum=-2.269;VQSLOD=1.9365;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:96.31:0,96,1548	1/1:3,0:3:6.43:46,6,0	0/0:18,0:9:1.28:0,1,84	0/0:33,0:26:32.02:0,32,429	0/0:11,0:11:24.08:0,24,393	0/0:19,0:19:42.08:0,42,675	0/0:22,0:23:54.14:0,54,806	1/1:28,0:27:26.17:229,26,0	1/1:13,18:34:39.13:950,39,0	0/0:36,0:37:93.31:0,93,1478	0/0:17,0:17:45.15:0,45,733	0/0:42,0:42:99:0,102,1566	0/0:25,0:25:60.19:0,60,959	0/0:27,0:27:63.22:0,63,1029	0/0:19,0:19:39.12:0,39,615	0/0:32,0:31:72.19:0,72,1076	0/0:29,0:29:72.22:0,72,1152	0/0:37,0:37:87.23:0,87,1370	1/1:13,0:13:14.97:191,15,0	0/1:12,0:11:0.12:0,0,0	1/1:28,0:28:8.55:60,9,0	0/0:19,0:19:42.13:0,42,654	0/0:12,0:12:30.10:0,30,491	0/0:45,0:45:99:0,105,1719	0/0:14,0:14:33.11:0,33,538	0/0:24,0:24:54.18:0,54,885	1/1:10,0:10:3.01:52,3,0	0/0:7,0:7:12.04:0,12,191
chr10	106711351	.	G	GTCTGTCTGTCTGTCTCTCTCTCTC	2448.55	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=6.598;DP=745;FS=33.750;HRun=0;HaplotypeScore=416.8381;InbreedingCoeff=0.7377;MQ=60.69;MQ0=7;MQRankSum=-9.057;QD=20.93;ReadPosRankSum=-6.643;VQSLOD=0.1837;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,120,6262	0/1:9,0:9:10.13:102,0,10	0/1:32,0:11:6.89:7,0,524	0/0:43,0:27:58.58:0,59,1647	0/0:15,0:15:39.05:0,39,1840	0/0:24,0:24:60.07:0,60,3024	0/0:22,0:22:60.16:0,60,2876	1/1:30,0:28:51.04:1133,51,0	0/0:36,0:36:66.17:0,66,1806	0/0:48,0:48:99:0,139,6649	0/0:19,0:19:54.17:0,54,2908	0/0:45,0:45:99:0,132,6294	0/0:31,0:31:90.28:0,90,4104	0/0:34,0:34:90.31:0,90,4476	0/0:21,0:21:63.14:0,63,2756	0/0:30,0:29:84.23:0,84,4101	0/0:32,0:32:90.23:0,90,4832	0/0:36,0:36:99:0,105,5644	1/1:11,0:11:30.07:876,30,0	1/1:11,0:10:5.19:18,5,0	1/1:18,1:19:7.66:84,8,0	0/0:23,0:23:63.19:0,63,2589	0/0:18,0:18:48.12:0,48,2237	0/0:48,0:48:99:0,141,7416	0/0:15,0:15:39.11:0,39,1895	0/0:34,0:34:93.25:0,93,4088	1/1:1,3:5:6.02:393,6,0	0/0:5,0:5:12.04:0,12,706
chr10	106711373	.	TAC	T	166.52	PASS	AB=0.860;AC=10;AF=0.179;AN=56;BaseQRankSum=7.413;DP=811;FS=1.754;HRun=0;HaplotypeScore=129.2716;InbreedingCoeff=0.6701;MQ=55.29;MQ0=6;MQRankSum=-7.220;QD=2.01;ReadPosRankSum=-3.437;VQSLOD=1.7220;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:55,1:56:99:0,123,1954	1/1:7,0:7:4.74:19,5,0	0/0:39,0:15:31.25:0,31,393	0/0:41,0:23:20.08:0,20,276	0/0:16,0:16:45.14:0,45,738	0/0:28,0:28:60.21:0,60,1020	0/0:25,0:25:58.39:0,58,878	0/1:34,5:35:99:134,0,138	0/0:36,0:36:87.26:0,87,1408	0/0:52,0:52:99:0,129,2113	0/0:21,0:21:57.18:0,57,921	0/0:41,0:41:99:0,111,1813	0/0:35,0:35:90.30:0,90,1496	0/0:37,0:37:99:0,102,1656	0/0:24,0:24:66.23:0,66,1114	0/0:28,0:27:77.05:0,77,1223	0/0:37,0:37:84.61:0,85,1454	0/0:41,0:41:93.29:0,93,1471	1/1:11,0:10:5.49:103,5,0	1/1:6,2:8:0.47:1,0,0	0/1:8,2:10:0:0,0,0	0/0:27,0:27:69.22:0,69,1141	0/0:23,0:22:57.17:0,57,936	0/0:61,0:61:99:0,139,2235	0/0:20,0:20:36.04:0,36,726	0/0:35,0:35:93.20:0,93,1446	1/1:8,0:8:6.35:31,6,0	0/0:5,0:5:15.02:0,15,194
chr10	106711381	.	C	CATAT	1843.30	PASS	AB=0.667;AC=9;AF=0.161;AN=56;BaseQRankSum=7.474;DP=805;FS=1.344;HRun=0;HaplotypeScore=160.2677;InbreedingCoeff=0.8683;MQ=56.52;MQ0=7;MQRankSum=-9.610;QD=24.91;ReadPosRankSum=-3.784;VQSLOD=2.9651;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,129,2361	1/1:1,5:6:5.68:165,6,0	0/0:44,0:21:53.52:0,54,834	0/0:41,0:24:53.42:0,53,770	0/0:16,0:16:48.15:0,48,910	0/0:26,0:26:63.14:0,63,1222	0/0:27,0:27:67.99:0,68,1159	1/1:27,14:37:41.23:1142,41,0	0/0:36,0:36:93.28:0,93,1725	0/0:50,0:49:99:0,144,2663	0/0:23,0:23:66.19:0,66,1207	0/0:42,0:42:99:0,120,2249	0/0:33,0:33:96.33:0,96,1873	0/0:36,0:36:99:0,105,1993	0/0:22,0:22:66.23:0,66,1317	0/0:28,0:27:81.26:0,81,1550	0/0:40,0:40:99:0,108,1883	0/0:38,0:38:84:0,84,1822	1/1:5,7:11:24.02:496,24,0	0/0:4,3:7:0.27:0,0,1	0/1:4,4:8:0.02:0,0,0	0/0:26,0:26:72.25:0,72,1398	0/0:21,0:20:57.17:0,57,1087	0/0:58,0:58:99:0,147,2709	0/0:22,0:22:56.39:0,56,1006	0/0:35,0:35:99:0,102,1831	1/1:5,2:7:8.99:187,9,0	0/0:7,0:7:15.03:0,15,252
chr10	106711400	.	ATGCAC	A	273	PASS	AB=0.811;AC=9;AF=0.161;AN=56;BaseQRankSum=7.034;DP=772;FS=3.508;HRun=0;HaplotypeScore=170.0053;InbreedingCoeff=0.6721;MQ=56.83;MQ0=6;MQRankSum=-6.554;QD=5.81;ReadPosRankSum=-3.087;VQSLOD=2.0475;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:51:99:0,115,3992	1/1:0,4:4:6.02:64,6,0	0/0:47,0:29:87.24:0,87,2497	0/0:35,0:22:57.68:0,58,1739	0/0:19,0:19:57.20:0,57,1885	0/0:23,0:23:60.19:0,60,1901	0/0:24,0:24:62.55:0,63,1937	0/1:23,5:27:99:167,0,273	0/0:36,0:36:96.33:0,96,3121	0/0:53,0:53:99:0,157,4984	0/0:17,0:17:51.18:0,51,1620	0/0:44,0:44:99:0,129,4181	0/0:31,0:31:93.32:0,93,3047	0/0:33,0:33:93.29:0,93,2980	0/0:28,0:28:84.29:0,84,2666	0/0:26,0:25:78.27:0,78,2454	0/0:41,0:41:99:0,109,3436	0/0:32,0:31:92.12:0,92,2820	1/1:1,2:3:4.45:98,4,0	0/0:2,2:4:7:0,7,20	1/1:4,1:4:0.84:3,1,0	0/0:30,0:30:87.30:0,87,2856	0/0:24,0:23:63.22:0,63,2008	0/0:56,0:56:99:0,140,4702	0/0:26,0:26:48.65:0,49,2410	0/0:34,0:34:99:0,99,3192	1/1:3,2:5:6.02:67,6,0	0/0:8,0:8:24.08:0,24,798
chr10	106711401	.	TGC	T	313.03	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=8.516;DP=769;FS=0.000;HRun=0;HaplotypeScore=127.7369;InbreedingCoeff=0.7753;MQ=56.79;MQ0=6;MQRankSum=-7.703;QD=6.81;ReadPosRankSum=-4.064;VQSLOD=2.5442;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,122,2333	1/1:4,0:4:5.86:36,6,0	0/0:49,0:30:64.98:0,65,1499	0/0:35,0:22:49.92:0,50,941	0/0:19,0:19:57.20:0,57,1148	0/0:22,0:22:57.20:0,57,1142	0/0:24,0:24:60.01:0,60,1121	1/1:23,7:27:0.02:349,0,0	0/0:36,0:36:96.30:0,96,1848	0/0:57,0:56:99:0,164,3067	0/0:18,0:18:51.09:0,51,923	0/0:42,0:42:99:0,126,2494	0/0:31,0:31:93.27:0,93,1798	0/0:32,0:32:90.30:0,90,1763	0/0:28,0:28:84.23:0,84,1549	0/0:26,0:25:78.23:0,78,1434	0/0:39,1:40:87.88:0,88,2017	0/0:32,0:31:90.19:0,90,1650	1/1:3,0:3:6.15:30,6,0	1/1:3,1:4:0.47:1,0,0	./.	0/0:30,0:30:87.28:0,87,1718	0/0:23,0:22:63.18:0,63,1161	0/0:55,1:56:99:0,145,2778	0/0:26,0:26:66.15:0,66,1467	0/0:34,0:34:99:0,99,1884	1/1:4,1:5:4.17:20,4,0	0/0:8,0:8:24.08:0,24,480
chr10	106711405	.	C	CAGAA	629.76	PASS	AB=0.962;AC=10;AF=0.179;AN=56;BaseQRankSum=8.800;DP=785;FS=18.396;HRun=0;HaplotypeScore=163.1700;InbreedingCoeff=0.6744;MQ=56.42;MQ0=7;MQRankSum=-8.545;QD=10.67;ReadPosRankSum=-5.116;VQSLOD=0.6070;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,113,2382	1/1:4,0:4:11.67:103,12,0	0/0:49,0:27:81.22:0,81,1541	0/0:35,0:23:58.06:0,58,1049	0/0:19,0:19:57.20:0,57,1132	0/0:22,0:22:60.19:0,60,1150	0/0:26,0:26:63.48:0,63,1151	0/1:33,3:33:99:406,0,473	0/0:34,0:34:90.31:0,90,1783	0/0:59,0:59:99:0,169,3152	0/0:19,0:19:51.13:0,51,967	0/0:43,0:43:99:0,129,2511	0/0:31,0:31:93.30:0,93,1804	0/0:32,0:32:90.29:0,90,1759	0/0:30,0:30:84.24:0,84,1569	0/0:27,0:26:78.24:0,78,1451	0/0:40,0:40:99:0,111,2080	0/0:33,0:32:86.60:0,87,1686	0/1:4,0:4:14.98:89,0,15	1/1:3,1:4:10.63:44,11,0	1/1:5,1:5:3.62:11,4,0	0/0:30,0:30:87.28:0,87,1702	0/0:22,0:21:60.19:0,60,1150	0/0:53,0:53:99:0,128,2657	0/0:25,0:25:74.47:0,74,1444	0/0:34,0:34:96.31:0,96,1873	1/1:5,0:5:8.06:126,8,0	0/0:8,0:8:24.08:0,24,479
chr10	106711431	.	TGC	T	144.29	PASS	AB=0.958;AC=9;AF=0.161;AN=56;BaseQRankSum=8.055;DP=799;FS=8.386;HRun=0;HaplotypeScore=132.8386;InbreedingCoeff=0.5274;MQ=58.42;MQ0=5;MQRankSum=-6.856;QD=2.89;ReadPosRankSum=-3.711;VQSLOD=0.8579;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:57,1:59:99:0,144,2795	0/1:6,0:6:12.76:13,0,13	0/0:38,1:25:73.10:0,73,1206	0/0:35,0:21:19.32:0,19,829	0/0:20,0:20:60.17:0,60,1123	0/0:20,0:20:57.18:0,57,1083	0/0:35,0:35:90.27:0,90,1718	1/1:13,6:17:6.36:189,6,0	0/0:41,0:41:99:0,117,2172	0/0:59,0:59:99:0,151,3181	0/0:23,0:23:66.15:0,66,1250	0/0:44,0:44:99:0,132,2570	0/0:37,0:37:99:0,111,2085	0/0:39,0:39:99:0,114,2060	0/0:26,0:26:78.24:0,78,1507	0/0:21,0:21:63.21:0,63,1236	0/0:38,0:38:93.57:0,94,2007	0/0:23,0:23:39.50:0,39,1105	1/1:3,0:3:4.75:25,5,0	0/1:6,1:7:17.90:18,0,18	1/1:9,0:8:2.23:9,2,0	0/0:26,0:26:75.19:0,75,1472	0/0:25,0:24:66.17:0,66,1208	0/0:58,1:59:99:0,144,2808	0/0:30,0:30:90.30:0,90,1782	0/0:41,0:41:99:0,117,2293	0/1:5,0:5:3.57:22,0,4	0/0:8,0:8:24.06:0,24,449
chr10	106711443	.	AAC	A	150.66	PASS	AB=0.976;AC=8;AF=0.143;AN=56;BaseQRankSum=8.850;DP=791;FS=1.661;HRun=0;HaplotypeScore=127.4310;InbreedingCoeff=0.7040;MQ=56.88;MQ0=20;MQRankSum=-7.781;QD=3.21;ReadPosRankSum=-5.531;VQSLOD=0.1803;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,129,2154	1/1:3,2:6:11.74:92,12,0	0/0:41,0:18:44.98:0,45,662	0/0:31,0:17:34.05:0,34,610	0/0:19,0:19:54.16:0,54,892	0/0:15,0:15:36.12:0,36,610	0/0:36,0:36:90.28:0,90,1492	0/1:19,1:17:53.08:53,0,104	0/0:37,0:37:96.31:0,96,1630	0/0:56,0:55:99:0,154,2599	0/0:24,0:24:63.19:0,63,1091	0/0:38,0:38:99:0,102,1739	0/0:33,0:33:93.30:0,93,1569	0/0:36,0:36:96.33:0,96,1652	0/0:24,0:24:57.20:0,57,987	0/0:24,0:24:66.21:0,66,1105	0/0:38,0:38:94.04:0,94,1570	0/0:25,0:25:27.72:0,28,911	0/0:21,0:8:16.06:0,16,165	1/1:4,2:7:17.09:108,17,0	0/1:9,0:8:0.20:0,0,33	0/0:29,0:29:84.29:0,84,1442	0/0:22,0:22:57.20:0,57,980	0/0:56,0:56:99:0,126,2129	0/0:32,0:32:73.95:0,74,1447	0/0:40,0:40:96.33:0,96,1654	1/1:2,2:5:5.11:33,5,0	0/0:7,0:7:21.07:0,21,364
chr10	106711477	.	C	CAG	114.66	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=7.418;DP=858;FS=9.668;HRun=0;HaplotypeScore=135.7752;InbreedingCoeff=0.6927;MQ=53.52;MQ0=27;MQRankSum=-6.582;QD=1.47;ReadPosRankSum=-2.687;VQSLOD=1.4331;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:56:99:0,133,1877	1/1:2,2:4:5.96:43,6,0	0/0:54,0:11:32.95:0,33,416	0/0:38,0:16:17.46:0,17,354	0/0:25,0:25:69.11:0,69,960	0/0:16,0:16:45.10:0,45,606	0/0:38,0:38:99:0,102,1390	0/1:39,0:35:66.43:66,0,139	0/0:34,0:34:96.19:0,96,1369	0/0:58,0:58:99:0,168,2341	0/0:21,0:21:60.14:0,60,821	0/0:38,0:38:99:0,114,1552	0/0:28,0:28:84.17:0,84,1187	0/0:34,0:34:99:0,99,1342	0/0:30,0:30:87.24:0,87,1262	0/0:33,0:33:99:0,99,1452	0/0:39,0:39:99:0,100,1395	0/0:33,0:32:70.90:0,71,911	0/0:16,0:5:9.02:0,9,101	1/1:5,5:9:11.90:92,12,0	1/1:19,2:17:1.66:27,2,0	0/0:27,0:27:72.21:0,72,1041	0/0:20,0:20:60.16:0,60,849	0/0:51,0:51:99:0,120,1598	0/0:40,0:40:99:0,111,1529	0/0:41,0:41:99:0,120,1774	1/1:1,3:4:2.98:21,3,0	0/0:10,0:10:27.06:0,27,366
chr10	106711481	.	T	TAC	641.23	PASS	AB=0.820;AC=11;AF=0.196;AN=56;BaseQRankSum=8.059;DP=879;FS=3.396;HRun=0;HaplotypeScore=135.4683;InbreedingCoeff=0.7346;MQ=53.14;MQ0=25;MQRankSum=-7.808;QD=5.73;ReadPosRankSum=-5.191;VQSLOD=0.9367;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,117,1477	1/1:5,1:6:5.92:40,6,0	0/0:54,0:11:32.56:0,33,367	0/0:33,0:15:8.50:0,9,360	0/0:24,0:24:60.11:0,60,761	0/0:16,0:16:36.12:0,36,467	0/0:37,0:37:79.77:0,80,1037	0/1:39,11:44:82.12:562,0,82	0/0:35,0:35:59.18:0,59,995	0/0:56,0:56:99:0,141,1775	0/0:20,0:20:51.17:0,51,662	0/0:37,0:37:90.14:0,90,1101	0/0:33,0:33:87.22:0,87,1066	0/0:34,0:34:93.23:0,93,1196	0/0:31,0:31:87.25:0,87,1098	0/0:33,0:33:90.28:0,90,1153	0/0:40,0:40:86.34:0,86,1177	0/0:31,0:30:75.07:0,75,863	1/1:16,0:5:2.99:24,3,0	1/1:10,0:9:8.91:69,9,0	1/1:21,4:20:5.88:56,6,0	0/0:27,0:27:60.16:0,60,737	0/0:20,0:20:48.16:0,48,622	0/0:50,0:50:93.52:0,94,1154	0/0:38,0:38:93.29:0,93,1192	0/0:45,0:45:99:0,117,1480	1/1:5,0:5:5.92:40,6,0	0/0:9,0:9:21.03:0,21,255
chr10	106711581	.	G	GAC	931.67	PASS	AB=1.000;AC=6;AF=0.115;AN=52;BaseQRankSum=-2.295;DP=740;FS=0.743;HRun=0;HaplotypeScore=111.4092;InbreedingCoeff=0.6334;MQ=52.35;MQ0=17;MQRankSum=1.576;QD=15.27;ReadPosRankSum=0.784;VQSLOD=3.1036;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:60.14:0,60,749	0/1:6,0:6:18.25:18,0,22	0/0:47,0:20:42.08:0,42,503	0/0:47,0:27:62.77:0,63,699	0/0:23,0:23:60.19:0,60,762	0/0:23,0:23:54.16:0,54,672	0/0:19,0:19:38.71:0,39,454	0/0:31,0:25:4.19:0,4,188	1/1:2,26:27:60.21:1004,60,0	0/0:43,0:43:99:0,117,1449	0/0:15,0:15:36.11:0,36,452	0/0:30,0:30:81.15:0,81,994	0/0:23,0:23:60.19:0,60,761	0/0:24,0:24:54.17:0,54,686	0/0:38,0:38:78.32:0,78,1192	0/0:29,0:29:69.16:0,69,820	0/0:21,0:21:34.48:0,34,426	0/0:33,0:34:66.69:0,67,1019	1/1:9,0:5:3:25,3,0	./.	0/1:18,0:15:0.04:0,0,0	0/0:34,0:34:84.26:0,84,1054	0/0:29,0:29:69.16:0,69,822	0/0:35,0:35:57.14:0,57,695	0/0:23,0:23:54.17:0,54,686	0/0:48,0:48:99:0,132,1666	./.	0/0:16,0:16:45.14:0,45,573
chr10	106711591	.	CAGAGAT	C	146.52	PASS	AB=0.826;AC=5;AF=0.096;AN=52;BaseQRankSum=5.270;DP=709;FS=0.000;HRun=0;HaplotypeScore=154.6314;InbreedingCoeff=0.3281;MQ=52.89;MQ0=12;MQRankSum=-4.978;QD=3.12;ReadPosRankSum=-0.475;VQSLOD=2.1383;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:66.21:0,66,2220	0/1:3,1:5:17.71:49,0,18	0/0:47,0:21:57.19:0,57,1685	0/0:44,0:27:72.25:0,72,2008	0/0:24,0:24:66.23:0,66,2289	0/0:22,0:22:57.20:0,57,2031	0/0:16,0:17:42.11:0,42,1313	0/1:23,0:19:99:138,0,220	0/0:28,0:27:66.23:0,66,1798	0/0:48,0:48:99:0,141,4555	0/0:18,0:18:45.15:0,45,1475	0/0:30,0:30:87.30:0,87,3041	0/0:21,0:21:63.22:0,63,2239	0/0:20,0:20:57.20:0,57,1992	0/0:37,0:37:99:0,108,3606	0/0:28,0:28:80.96:0,81,2591	0/0:21,0:22:0.41:0,0,1176	0/0:34,1:35:41.54:0,42,3012	1/1:5,1:3:3.01:61,3,0	./.	0/1:9,3:10:0.01:0,0,0	0/0:32,0:32:93.31:0,93,3209	0/0:28,0:28:72.19:0,72,2406	0/0:27,0:29:63.20:0,63,2147	0/0:23,0:23:63.22:0,63,2235	0/0:51,0:51:99:0,151,5359	./.	0/0:16,0:16:48.16:0,48,1719
chr10	106711593	.	GAGAT	G	206.21	PASS	AB=0.900;AC=6;AF=0.115;AN=52;BaseQRankSum=5.793;DP=706;FS=1.208;HRun=0;HaplotypeScore=128.3191;InbreedingCoeff=0.2872;MQ=53.93;MQ0=12;MQRankSum=-4.486;QD=3.38;ReadPosRankSum=-1.079;VQSLOD=2.4709;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:63.22:0,63,1700	0/1:5,0:5:7.56:8,0,35	0/0:49,0:22:60.20:0,60,1371	0/0:45,0:27:71.58:0,72,1610	0/0:23,0:23:66.23:0,66,1755	0/0:23,0:23:63.22:0,63,1668	0/0:15,0:15:36.12:0,36,964	0/1:12,6:15:99:240,0,225	0/0:29,0:28:69.24:0,69,1743	0/0:51,0:51:99:0,144,3641	0/0:18,0:18:45.15:0,45,1163	0/0:31,0:31:90.24:0,90,2416	0/0:23,0:23:69.24:0,69,1858	0/0:20,0:20:57.20:0,57,1541	0/0:37,0:37:99:0,105,2748	0/0:27,0:27:77.91:0,78,1975	0/1:20,2:22:34.61:35,0,950	0/0:35,0:35:84.08:0,84,2321	1/1:2,1:2:3.01:30,3,0	./.	0/1:11,1:9:0:0,0,0	0/0:31,0:31:90.31:0,90,2467	0/0:27,0:27:72.16:0,72,1861	0/0:29,0:29:60.21:0,60,1663	0/0:23,0:23:63.22:0,63,1735	0/0:52,0:52:99:0,154,4179	./.	0/0:16,0:16:48.16:0,48,1329
chr10	106711599	.	T	TACAC	388.10	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=6.473;DP=731;FS=2.300;HRun=0;HaplotypeScore=135.9953;InbreedingCoeff=0.7102;MQ=53.98;MQ0=10;MQRankSum=-5.840;QD=11.76;ReadPosRankSum=-2.826;VQSLOD=3.0242;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:63.16:0,63,1117	1/1:4,1:5:2.63:79,3,0	0/0:48,0:18:42.11:0,42,716	0/0:49,0:26:47.51:0,48,955	0/0:21,0:21:54.17:0,54,955	0/0:24,0:24:60.18:0,60,1043	0/0:17,0:17:40.93:0,41,691	1/1:25,3:25:30.34:416,30,0	0/0:30,0:29:72.20:0,72,1226	0/0:48,0:48:99:0,133,2329	0/0:16,0:16:39.13:0,39,717	0/0:32,0:32:90.29:0,90,1619	0/0:26,0:26:66.19:0,66,1137	0/0:22,0:22:48.15:0,48,852	0/0:36,0:36:90.29:0,90,1619	0/0:25,0:25:69.24:0,69,1261	0/0:23,0:24:37.94:0,38,662	0/0:35,0:35:6.28:0,6,1356	0/0:7,0:5:3.48:0,3,31	./.	0/0:9,2:9:2.32:0,2,12	0/0:34,0:34:93.30:0,93,1668	0/0:26,0:26:60.21:0,60,1103	0/0:30,0:30:57.18:0,57,1038	0/0:24,0:24:63.18:0,63,1092	0/0:53,0:53:99:0,144,2593	./.	0/0:17,0:17:51.17:0,51,920
chr10	106711659	.	CAT	C	203.14	PASS	AB=0.833;AC=5;AF=0.096;AN=52;BaseQRankSum=7.111;DP=721;FS=7.476;HRun=0;HaplotypeScore=103.8119;InbreedingCoeff=0.5859;MQ=50.73;MQ0=13;MQRankSum=-6.341;QD=3.28;ReadPosRankSum=-3.811;VQSLOD=0.4842;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:56.87:0,57,992	0/1:4,1:5:0:0,0,0	0/0:46,0:19:52.87:0,53,844	0/0:49,0:19:18.28:0,18,605	0/0:13,0:13:39.10:0,39,675	0/0:17,1:18:42.10:0,42,740	0/0:31,0:31:69.15:0,69,1296	0/1:24,7:21:29.56:268,0,30	0/0:28,0:27:63.18:0,63,1143	0/0:49,0:49:99:0,144,2744	0/0:19,0:19:57.17:0,57,1032	0/0:28,0:28:75.15:0,75,1262	0/0:25,0:25:72.14:0,72,1297	0/0:31,0:31:90.22:0,90,1567	0/0:32,0:32:90.11:0,90,1624	0/0:28,1:29:40.60:0,41,1388	0/0:23,0:23:32.69:0,33,687	0/0:29,1:31:32.39:0,32,1208	1/1:8,0:5:7.69:29,8,0	0/1:14,3:17:0:0,0,0	./.	0/0:25,0:25:72.23:0,72,1346	0/0:16,0:16:39.09:0,39,691	0/0:24,0:24:57.17:0,57,1031	0/0:16,0:16:45.15:0,45,864	0/0:47,0:47:99:0,123,2506	./.	0/0:10,0:10:30:0,30,536
chr10	106711828	.	GAT	G	238.61	PASS	AB=0.917;AC=6;AF=0.107;AN=56;BaseQRankSum=2.347;DP=735;FS=5.561;HRun=0;HaplotypeScore=106.4818;InbreedingCoeff=0.5226;MQ=53.76;MQ0=13;MQRankSum=-4.047;QD=6.12;ReadPosRankSum=-3.339;VQSLOD=1.7941;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:96.22:0,96,1683	0/0:3,1:4:1.16:0,1,3	0/0:45,0:15:44.61:0,45,633	0/0:36,0:17:40.39:0,40,678	0/0:19,0:19:45.14:0,45,786	0/0:17,0:17:48.16:0,48,915	0/0:29,0:29:81.19:0,81,1471	1/1:9,3:11:23.91:267,24,0	0/0:34,0:34:92.90:0,93,1631	0/0:43,0:43:99:0,121,2001	0/0:12,0:12:36.10:0,36,650	0/0:34,0:34:99:0,99,1835	0/0:36,0:36:99:0,108,2034	0/0:32,0:32:96.23:0,96,1696	0/0:35,0:34:96.30:0,96,1750	0/0:29,0:29:68.12:0,68,1272	0/0:31,0:30:58.40:0,58,1287	0/0:33,0:33:96.26:0,96,1704	0/1:8,2:5:57.72:58,0,91	0/0:8,2:10:0.93:0,1,4	1/1:6,6:10:3:25,3,0	0/0:22,0:22:63.14:0,63,1049	0/0:20,0:20:57.20:0,57,1091	0/0:48,0:48:99:0,117,2095	0/0:25,0:25:72.25:0,72,1359	0/0:40,0:40:99:0,120,2065	0/1:5,0:5:11.15:11,0,30	0/0:21,0:21:63.22:0,63,1193
chr10	106711858	.	CAGAT	C	213.69	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=6.596;DP=742;FS=3.808;HRun=0;HaplotypeScore=137.4386;InbreedingCoeff=0.5540;MQ=53.23;MQ0=19;MQRankSum=-5.828;QD=6.11;ReadPosRankSum=-2.987;VQSLOD=1.8974;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:96.31:0,96,2546	0/1:5,0:5:4.08:6,0,4	0/0:33,0:8:20.90:0,21,472	0/0:38,1:18:47.95:0,48,1106	0/0:17,0:17:42.14:0,42,1150	0/0:22,0:21:60.17:0,60,1455	0/0:32,0:32:90.30:0,90,2327	1/1:7,6:11:17.27:301,17,0	0/0:40,0:39:99:0,117,3154	0/0:38,0:37:91.30:0,91,2567	0/0:9,0:9:27.09:0,27,713	0/0:33,0:33:96.33:0,96,2559	0/0:35,0:35:99:0,102,2626	0/0:27,0:26:75.26:0,75,1946	0/0:36,0:35:99:0,101,2730	0/0:32,0:32:87.28:0,87,2237	0/0:36,0:35:26.06:0,26,2222	0/0:40,0:40:99:0,109,2878	0/1:4,0:4:6.12:6,0,10	0/0:6,2:8:1.68:0,2,5	0/1:13,0:12:0.06:0,0,0	0/0:20,0:20:60.19:0,60,1446	0/0:26,0:26:72.25:0,72,1915	0/0:48,0:48:99:0,126,3244	0/0:28,0:28:77.84:0,78,2097	0/0:45,0:45:99:0,109,3377	0/0:4,0:4:3.83:0,4,22	0/0:21,0:21:63.22:0,63,1726
chr10	106711866	.	CAG	C	228.84	PASS	AB=0.967;AC=7;AF=0.125;AN=56;BaseQRankSum=7.486;DP=745;FS=28.400;HRun=0;HaplotypeScore=114.8917;InbreedingCoeff=0.5002;MQ=53.21;MQ0=18;MQRankSum=-7.476;QD=4.40;ReadPosRankSum=-3.386;VQSLOD=0.5256;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:96.27:0,96,1738	1/1:2,3:5:2.79:42,3,0	0/0:29,0:7:21.03:0,21,339	0/0:35,0:16:45.15:0,45,806	0/0:16,0:16:42.12:0,42,760	0/0:20,0:19:54.18:0,54,991	0/0:36,0:36:96.29:0,96,1679	0/1:17,0:16:78.81:113,0,79	0/0:45,0:44:99:0,132,2472	0/0:32,0:31:75.81:0,76,1594	0/0:9,0:9:24.08:0,24,463	0/0:34,0:34:99:0,99,1771	0/0:34,0:34:96.33:0,96,1793	0/0:28,0:27:78.25:0,78,1453	0/0:36,0:35:99:0,102,1891	0/0:31,0:31:78.24:0,78,1396	0/0:34,0:33:60.12:0,60,1467	0/0:39,0:40:99:0,112,2054	0/1:8,0:8:21.05:101,0,21	0/0:8,1:9:1.55:0,2,5	0/1:14,0:13:0.08:0,0,0	0/0:17,0:17:48.14:0,48,888	0/0:24,0:24:69.22:0,69,1281	0/0:47,0:47:99:0,123,2243	0/0:31,0:31:84.27:0,84,1558	0/0:47,0:47:99:0,125,2461	1/1:6,0:6:8.85:91,9,0	0/0:22,0:22:63.20:0,63,1152
chr10	106711868	.	GAT	G	512.93	PASS	AB=0.606;AC=7;AF=0.125;AN=56;BaseQRankSum=6.742;DP=726;FS=39.802;HRun=0;HaplotypeScore=111.5297;InbreedingCoeff=0.4988;MQ=53.40;MQ0=17;MQRankSum=-7.037;QD=10.47;ReadPosRankSum=-3.255;VQSLOD=0.9243;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:90.31:0,90,1719	1/1:4,1:5:2.77:25,3,0	0/0:29,0:7:20.83:0,21,276	0/0:34,0:16:45.12:0,45,732	0/0:15,0:15:39.11:0,39,708	0/0:18,0:18:54.15:0,54,969	0/0:35,0:35:96.18:0,96,1589	0/1:9,9:16:99:232,0,126	0/0:45,0:45:99:0,135,2539	0/0:32,0:31:88.76:0,89,1563	0/0:8,0:8:24.08:0,24,463	0/0:31,0:31:93.26:0,93,1652	0/0:33,0:33:99:0,99,1768	0/0:27,0:26:78.23:0,78,1419	0/0:35,0:35:99:0,99,1857	0/0:28,0:28:75.22:0,75,1339	0/0:34,0:33:70.74:0,71,1403	0/0:40,0:40:99:0,113,2011	0/1:3,6:8:32.17:207,0,32	0/0:4,5:9:1.55:0,2,5	0/1:2,9:10:0.08:0,0,0	0/0:16,0:16:47.83:0,48,868	0/0:23,0:23:69.21:0,69,1255	0/0:47,0:47:99:0,123,2268	0/0:30,0:30:84.27:0,84,1556	0/0:47,0:47:99:0,125,2343	1/1:0,6:6:8.95:167,9,0	0/0:24,0:24:72.19:0,72,1232
chr10	106711894	.	A	AAC	862.71	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.334;DP=765;FS=66.525;HRun=0;HaplotypeScore=126.7645;InbreedingCoeff=0.9020;MQ=54.97;MQ0=12;MQRankSum=-8.831;QD=9.48;ReadPosRankSum=-4.662;VQSLOD=0.4093;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:75.09:0,75,918	1/1:4,1:5:3.01:36,3,0	0/0:36,0:15:32.10:0,32,328	0/0:31,0:12:12.04:0,12,146	0/0:12,0:12:33.11:0,33,412	0/0:18,0:18:38.64:0,39,473	0/0:27,0:27:60.10:0,60,718	1/1:15,8:22:24.08:395,24,0	0/0:50,0:50:99:0,126,1545	0/0:31,0:30:69.09:0,69,827	0/0:8,0:8:15.05:0,15,188	0/0:40,0:40:99:0,105,1250	0/0:31,0:31:81.22:0,81,982	0/0:35,0:35:84.07:0,84,1000	0/0:29,0:29:67.08:0,67,814	0/0:24,0:25:72.06:0,72,876	0/0:35,0:34:76.59:0,77,955	0/0:39,0:39:90.24:0,90,1092	1/1:14,2:13:24.07:298,24,0	1/1:11,3:14:6.47:98,6,0	1/1:18,8:23:5.07:45,5,0	0/0:16,0:15:39.05:0,39,458	0/0:23,0:22:57.15:0,57,685	0/0:51,0:51:99:0,129,1549	0/0:34,0:34:81.52:0,82,951	0/0:47,0:47:99:0,108,1310	1/1:7,0:7:15.03:158,15,0	0/0:23,0:23:54.17:0,54,675
chr10	106711911	.	ACACGCACG	A	1272.36	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.198;DP=733;FS=60.935;HRun=0;HaplotypeScore=198.8646;InbreedingCoeff=0.8235;MQ=57.23;MQ0=6;MQRankSum=-7.075;QD=13.25;ReadPosRankSum=-3.589;VQSLOD=0.5125;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:72.18:0,72,2253	1/1:5,2:7:3.01:40,3,0	0/0:31,0:15:3.10:0,3,326	0/0:22,0:7:2.98:0,3,21	0/0:14,0:14:21.07:0,21,796	0/0:18,0:18:42.12:0,42,1329	0/0:31,0:31:72.19:0,72,2065	1/1:10,1:11:3.01:60,3,0	0/0:45,0:45:99:0,108,3793	0/0:31,0:30:63.21:0,63,2239	0/0:8,0:8:15.04:0,15,467	0/0:40,0:40:96.27:0,96,3422	0/0:34,0:34:72.25:0,72,2602	0/0:33,0:33:84.29:0,84,3095	0/0:30,0:30:53.17:0,53,1963	0/0:28,0:28:66.23:0,66,2428	0/0:35,0:35:72.23:0,72,2584	0/0:32,0:33:75.11:0,75,2276	1/1:20,2:20:48:737,48,0	1/1:12,0:12:14.94:221,15,0	1/1:34,0:30:5.73:90,6,0	0/0:15,0:15:39.09:0,39,1237	0/0:18,0:18:27.09:0,27,1025	0/0:44,0:44:93.30:0,93,3253	0/0:30,0:30:68.83:0,69,2735	0/0:42,0:42:84.24:0,84,2897	1/1:10,0:10:15.05:290,15,0	0/0:22,0:22:51.17:0,51,1572
chr10	106711913	.	ACGCACG	A	1134.02	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=10.244;DP=719;FS=55.918;HRun=0;HaplotypeScore=167.7282;InbreedingCoeff=0.7199;MQ=57.51;MQ0=5;MQRankSum=-7.814;QD=9.30;ReadPosRankSum=-2.408;VQSLOD=0.9589;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:85.71:0,86,2441	1/1:4,1:5:3.01:40,3,0	0/1:31,0:16:8.54:9,0,592	0/0:21,0:7:15.25:0,15,166	0/0:15,0:15:42.01:0,42,973	0/0:18,0:18:48.15:0,48,1341	0/0:32,0:32:90.29:0,90,2332	0/1:10,0:10:17.82:48,0,18	0/0:47,0:47:99:0,138,4000	0/0:28,0:28:81.28:0,81,2379	0/0:7,0:7:18.06:0,18,493	0/0:39,0:39:99:0,114,3447	0/0:33,0:33:93.27:0,93,2558	0/0:32,0:32:93.30:0,93,2910	0/0:30,0:30:80.25:0,80,2148	0/0:28,0:28:84.29:0,84,2391	0/0:36,0:36:96.28:0,96,2733	0/0:32,0:32:92.68:0,93,2459	1/1:10,12:20:17.08:552,17,0	1/1:6,5:11:14.98:227,15,0	1/1:27,6:29:5.75:93,6,0	0/0:16,0:16:48.11:0,48,1305	0/0:14,0:14:39.13:0,39,1070	0/0:42,0:42:99:0,120,3466	0/0:29,0:29:74.47:0,74,2522	0/0:42,0:42:99:0,123,3231	1/1:0,10:10:15.04:331,15,0	0/0:23,0:23:69.23:0,69,1859
chr10	106714128	.	C	CT	2412.77	PASS	AB=0.917;AC=13;AF=0.232;AN=56;BaseQRankSum=-9.406;DP=527;FS=0.000;HRun=8;HaplotypeScore=59.0087;InbreedingCoeff=0.8881;MQ=73.60;MQ0=0;MQRankSum=-0.481;QD=23.20;ReadPosRankSum=-1.300;VQSLOD=3.6989;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,1010	1/1:0,6:6:15:158,15,0	0/0:27,0:23:29.10:0,29,283	0/0:17,1:15:17.96:0,18,204	0/0:23,0:23:53.98:0,54,483	0/0:22,0:22:51.01:0,51,467	0/0:18,0:18:51.01:0,51,461	1/1:5,21:26:63.17:716,63,0	0/0:20,0:20:54:0,54,489	0/0:19,0:19:47.51:0,48,417	0/0:16,0:16:42.02:0,42,384	0/0:17,0:17:48.02:0,48,436	0/0:20,0:20:54.03:0,54,494	0/0:22,0:22:57.01:0,57,517	0/0:23,0:23:60:0,60,539	0/0:16,0:16:42.01:0,42,381	0/0:17,0:17:45.02:0,45,412	0/0:19,0:19:48.02:0,48,439	1/1:4,17:21:51.14:579,51,0	1/1:0,9:9:27.08:312,27,0	1/1:1,8:9:18.05:208,18,0	0/0:11,1:12:0.68:0,1,246	0/1:10,1:11:1.60:2,0,241	0/0:23,0:23:66.03:0,66,604	0/0:21,0:21:57.03:0,57,521	0/0:11,0:11:30.01:0,30,274	1/1:1,21:22:54.16:623,54,0	0/0:18,0:18:36.02:0,36,330
chr10	106714839	.	G	GT	175.51	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=6.774;DP=505;FS=6.028;HRun=1;HaplotypeScore=57.9174;InbreedingCoeff=0.7402;MQ=65.19;MQ0=7;MQRankSum=-3.252;QD=2.93;ReadPosRankSum=0.153;VQSLOD=-0.5254;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:80.88:0,81,1030	./.	0/0:29,0:25:71.78:0,72,726	0/0:20,0:18:53.36:0,53,564	0/0:20,0:20:60.18:0,60,778	0/0:13,0:13:36.10:0,36,471	0/0:22,0:22:63.15:0,63,794	1/1:11,0:10:16.10:102,16,0	0/1:19,0:18:17.96:41,0,18	0/0:29,0:29:83.96:0,84,1025	0/0:20,0:20:51.09:0,51,648	0/0:20,0:20:57.13:0,57,743	0/0:14,0:14:36.12:0,36,481	0/0:13,0:13:34.64:0,35,462	0/0:22,0:22:60.18:0,60,788	0/0:31,0:31:90.28:0,90,1193	0/0:33,0:33:86.83:0,87,1116	0/0:21,0:21:57.19:0,57,781	1/1:0,5:4:8.94:78,9,0	1/1:2,5:7:0.47:1,0,0	1/1:9,1:7:3.01:38,3,0	0/0:11,0:11:27.08:0,27,336	0/0:17,0:17:47.31:0,47,546	0/0:28,0:27:63.20:0,63,848	0/0:19,0:19:54.17:0,54,724	0/0:26,0:26:78.23:0,78,1011	1/1:1,7:8:5.98:59,6,0	0/0:6,0:6:15.05:0,15,209
chr10	106716690	.	TGGTCCTCCCCACACGCCACTAC	T	3111.14	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=3.153;DP=702;FS=0.999;HRun=0;HaplotypeScore=380.1777;InbreedingCoeff=0.8296;MQ=74.91;MQ0=2;MQRankSum=1.287;QD=13.71;ReadPosRankSum=1.670;VQSLOD=1.2841;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:77.98:0,78,1670	1/1:4,0:4:9.03:173,9,0	0/1:25,0:20:6.04:6,0,16	0/1:33,0:31:1.39:1,0,108	0/0:11,0:11:17.98:0,18,296	0/0:18,0:18:36.11:0,36,778	0/0:36,0:36:69.22:0,69,1306	1/1:18,0:18:9.01:84,9,0	1/1:26,0:25:39.59:673,40,0	0/0:31,0:30:51.02:0,51,962	0/0:15,0:14:4.95:0,5,367	0/0:27,0:27:48.03:0,48,952	0/0:15,0:15:21.07:0,21,414	0/0:15,0:15:27:0,27,537	0/0:25,0:24:42.10:0,42,967	0/0:30,0:30:51.12:0,51,1293	0/0:35,0:35:78.05:0,78,1906	0/0:22,0:22:45.15:0,45,1428	1/1:14,7:21:20.99:346,21,0	1/1:9,11:20:14.94:256,15,0	1/1:69,0:67:90.19:1455,90,0	0/0:21,0:21:48.02:0,48,893	0/0:30,0:30:43.75:0,44,804	0/0:30,0:30:54.05:0,54,1132	0/0:21,0:21:41.76:0,42,924	0/0:24,0:24:44.68:0,45,852	1/1:11,0:11:21.03:307,21,0	0/0:22,0:22:33.09:0,33,651
chr10	106721112	.	G	GGGTTCATTCCCACCC	1010.86	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.853;DP=632;FS=7.351;HRun=0;HaplotypeScore=249.8118;InbreedingCoeff=0.9649;MQ=94.95;MQ0=0;MQRankSum=-3.806;QD=67.39;ReadPosRankSum=2.380;VQSLOD=2.3673;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,4456	0/0:15,0:15:39.03:0,39,1157	0/0:34,0:34:67.90:0,68,1422	0/0:25,0:25:57.04:0,57,1217	0/0:9,0:9:24.05:0,24,833	0/0:16,0:16:48.15:0,48,1737	0/0:31,0:31:84.20:0,84,2378	0/0:32,0:32:63.17:0,63,1665	1/1:2,8:15:15.05:1099,15,0	0/0:17,0:17:45.12:0,45,1306	0/0:10,0:10:30.05:0,30,972	0/0:40,0:40:99:0,108,3784	0/0:18,0:18:54.19:0,54,2266	0/0:26,0:26:72.22:0,72,2838	0/0:23,0:23:69.21:0,69,2629	0/0:21,0:21:57.16:0,57,1961	0/0:24,0:24:62.54:0,63,2286	0/0:18,0:18:54.17:0,54,2088	0/0:22,0:22:53.94:0,54,1265	0/0:14,0:14:39.13:0,39,1629	0/0:59,0:58:99:0,156,5062	0/0:14,0:14:39.13:0,39,1406	0/0:11,0:11:27.03:0,27,668	0/0:28,0:28:75.17:0,75,2531	0/0:17,0:17:51.15:0,51,1567	0/0:23,0:23:63.17:0,63,2006	0/0:19,0:19:54.14:0,54,1984	0/0:6,0:6:15.05:0,15,572
chr10	106721308	.	A	AAGG	7629.37	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-12.370;DP=613;FS=13.274;HRun=0;HaplotypeScore=86.5289;InbreedingCoeff=0.9979;MQ=82.45;MQ0=0;MQRankSum=-2.904;QD=48.91;ReadPosRankSum=-1.044;VQSLOD=5.9474;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,123,1922	1/1:0,11:12:21.07:417,21,0	0/0:22,0:22:57.13:0,57,821	0/0:15,0:15:32.61:0,33,434	0/0:8,0:8:24.08:0,24,378	0/0:9,0:9:24.08:0,24,379	0/0:25,0:25:69.23:0,69,1093	1/1:4,17:21:48.15:980,48,0	1/1:2,12:14:36.12:784,36,0	0/0:20,0:20:54.18:0,54,860	0/0:15,0:15:42.14:0,42,660	0/0:32,0:32:87.30:0,87,1382	0/0:12,0:12:33.11:0,33,526	0/0:17,0:17:42.14:0,42,666	0/0:21,0:21:63.21:0,63,1004	0/0:21,0:21:54.18:0,54,859	0/0:31,0:31:87.27:0,87,1353	0/0:40,0:40:99:0,108,1690	1/1:3,13:16:39.13:800,39,0	1/1:5,11:16:33.11:700,33,0	1/1:4,45:49:99:2519,118,0	0/0:14,0:14:42.14:0,42,669	0/0:9,0:9:24.08:0,24,379	0/0:32,0:32:96.31:0,96,1496	0/0:20,0:20:57.17:0,57,865	0/0:30,0:30:78.25:0,78,1214	1/1:4,23:28:66.23:1429,66,0	0/0:17,0:17:45.15:0,45,696
chr10	106725490	.	A	AGG	4709.47	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-3.288;DP=897;FS=6.523;HRun=4;HaplotypeScore=145.0245;InbreedingCoeff=0.8898;MQ=70.77;MQ0=10;MQRankSum=-0.668;QD=21.02;ReadPosRankSum=-3.029;VQSLOD=1.4670;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:72.58:0,73,661	1/1:6,1:6:15.01:185,15,0	0/0:33,0:22:57.03:0,57,550	0/0:41,0:34:74.96:0,75,773	0/0:19,0:19:35.98:0,36,380	0/0:17,0:17:33.01:0,33,359	0/0:42,0:42:92.03:0,92,1104	1/1:24,3:26:57.23:655,57,0	0/1:39,0:38:99:224,0,342	0/0:48,0:48:94.98:0,95,1052	0/0:15,0:15:37.79:0,38,355	0/0:46,0:46:99:0,117,1262	0/0:34,0:34:80:0,80,801	0/0:29,0:29:83.23:0,83,811	0/0:35,0:34:67.71:0,68,736	0/0:30,0:30:37.88:0,38,709	0/0:45,0:45:99:0,120,1231	0/0:31,0:30:84.06:0,84,945	1/1:6,18:25:44.59:593,45,0	1/1:18,7:25:48.05:656,48,0	1/1:49,26:74:99:2157,152,0	0/0:32,0:32:83.70:0,84,840	0/0:27,0:27:50.07:0,50,574	0/0:28,0:27:77.92:0,78,766	0/0:19,0:19:54.02:0,54,575	0/0:35,0:34:82.91:0,83,818	1/1:4,20:23:11.75:238,12,0	0/0:34,0:34:96.04:0,96,1064
chr10	106725651	.	GGT	G	7090.75	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.556;DP=1186;FS=9.836;HRun=0;HaplotypeScore=175.5877;InbreedingCoeff=0.9921;MQ=55.67;MQ0=26;MQRankSum=0.818;QD=23.87;ReadPosRankSum=-1.391;VQSLOD=4.6643;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:82.51:0,83,1335	1/1:2,16:18:45.15:577,45,0	0/0:59,0:23:46.43:0,46,552	0/0:59,0:18:30.89:0,31,306	0/0:35,0:34:86.75:0,87,1397	0/0:19,0:19:45.15:0,45,744	0/0:40,0:41:99:0,105,1713	1/1:47,23:68:95.72:1425,96,0	0/0:52,0:52:99:0,123,1931	0/0:49,0:49:99:0,138,2258	0/0:25,0:25:72.23:0,72,1147	0/0:55,1:56:99:0,112,2317	0/0:40,0:40:99:0,100,1640	0/0:38,0:38:99:0,102,1637	0/0:39,0:39:99:0,102,1629	0/0:41,0:42:99:0,105,1724	0/0:30,0:30:72.29:0,72,1271	0/0:36,3:39:11:0,11,1445	1/1:19,8:24:42.03:487,42,0	1/1:5,26:31:66.16:815,66,0	1/1:62,59:119:99:2866,227,0	0/0:38,0:37:99:0,105,1713	0/0:30,0:30:70.48:0,70,1116	0/0:48,1:48:69.22:0,69,1638	0/0:36,0:36:90.31:0,90,1490	0/0:50,0:48:99:0,126,2042	1/1:7,19:26:72.23:920,72,0	0/0:23,0:23:57.67:0,58,928
chr10	106725732	.	A	ATG	8840.04	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=3.294;DP=1162;FS=0.957;HRun=0;HaplotypeScore=163.5683;InbreedingCoeff=0.9999;MQ=56.04;MQ0=26;MQRankSum=-0.071;QD=32.15;ReadPosRankSum=-1.091;VQSLOD=6.0428;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:38:87.26:0,87,1126	1/1:5,12:17:45.12:712,45,0	0/0:68,0:26:42.11:0,42,486	0/0:64,0:25:56.91:0,57,667	0/0:23,0:23:66.17:0,66,832	0/0:22,0:22:63.20:0,63,828	0/0:48,0:48:99:0,108,1399	1/1:14,42:55:99:1840,108,0	0/0:47,0:47:99:0,126,1546	0/0:42,0:42:99:0,109,1398	0/0:15,0:15:39.13:0,39,512	0/0:46,0:46:99:0,114,1453	0/0:37,0:37:93.27:0,93,1185	0/0:35,0:35:96.27:0,96,1213	0/0:41,0:41:99:0,120,1574	0/0:48,0:48:99:0,135,1756	0/0:36,0:36:64.28:0,64,1057	0/0:37,0:37:80.54:0,81,993	1/1:7,18:23:54.18:862,54,0	1/1:10,18:26:60.19:984,60,0	1/1:16,104:118:99:3311,196,0	0/0:44,0:44:99:0,114,1464	0/0:27,0:27:72.18:0,72,906	0/0:71,0:70:99:0,193,2470	0/0:28,0:28:60.16:0,60,757	0/0:54,0:53:99:0,144,1889	1/1:2,25:27:66.23:1131,66,0	0/0:12,0:12:30.05:0,30,361
chr10	106726713	.	TGA	T	194.63	PASS	AB=0.945;AC=11;AF=0.262;AN=42;BaseQRankSum=3.745;DP=475;FS=3.743;HRun=0;HaplotypeScore=56.9501;InbreedingCoeff=0.0071;MQ=68.11;MQ0=12;MQRankSum=-0.029;QD=0.97;ReadPosRankSum=2.277;VQSLOD=1.3351;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:11.81:0,12,85	./.	./.	0/0:34,0:13:0:0,0,0	./.	0/0:11,1:12:9.03:0,9,131	0/1:22,0:22:19.95:20,0,99	0/0:20,0:18:0:0,0,0	0/0:15,0:15:11.17:0,11,96	0/1:20,0:20:21.14:40,0,21	./.	0/0:19,0:19:9.02:0,9,110	0/0:11,0:11:12:0,12,116	0/0:19,0:19:6.46:0,6,49	0/1:17,0:17:5.13:5,0,41	0/0:10,0:8:3:0,3,25	0/1:33,5:38:25.08:25,0,271	1/1:13,0:21:11.36:56,11,0	0/0:10,0:9:3:0,3,28	0/1:15,1:16:22.96:23,0,59	0/0:28,0:26:17.29:0,17,144	./.	./.	0/1:31,10:41:99:103,0,244	1/1:10,0:9:3.01:32,3,0	0/1:15,0:15:12.03:17,0,12	0/0:9,0:9:5.99:0,6,65	./.
chr10	106727234	.	TA	T	1014.40	PASS	AB=0.796;AC=13;AF=0.232;AN=56;BaseQRankSum=0.512;DP=539;FS=7.146;HRun=12;HaplotypeScore=83.2775;InbreedingCoeff=0.6595;MQ=49.10;MQ0=53;MQRankSum=1.192;QD=6.26;ReadPosRankSum=0.888;VQSLOD=2.2060;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,2:46:84.42:0,84,784	1/1:1,13:13:29.88:232,30,0	0/0:21,0:9:8.77:0,9,79	0/0:10,0:5:11.94:0,12,92	0/0:18,2:21:4.21:0,4,200	0/0:15,1:16:20.98:0,21,193	0/0:14,0:12:24.01:0,24,230	1/1:5,16:16:32.85:254,33,0	0/0:10,0:8:8.98:0,9,80	0/0:38,0:36:45.94:0,46,613	0/0:28,0:28:18.78:0,19,163	0/1:26,2:26:14.38:14,0,217	0/0:10,0:10:17.75:0,18,182	0/0:11,0:11:11.98:0,12,111	0/0:18,0:18:20.34:0,20,271	0/0:11,0:11:24.52:0,25,243	0/0:22,0:18:33.92:0,34,327	0/1:22,2:16:10.43:10,0,260	1/1:6,9:8:11.94:92,12,0	1/1:5,17:21:41.66:315,42,0	0/1:2,15:14:1.80:98,0,2	0/0:17,0:17:26.94:0,27,241	0/0:11,0:12:3.78:0,4,128	0/0:11,1:8:12.02:0,12,122	0/0:18,0:18:29:0,29,257	0/0:23,1:24:27.88:0,28,460	1/1:8,13:21:20.91:177,21,0	0/0:9,1:9:14.99:0,15,141
chr10	106728969	.	TAA	T	3121.71	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.120;DP=637;FS=0.787;HRun=13;HaplotypeScore=87.8678;InbreedingCoeff=0.9983;MQ=75.45;MQ0=3;MQRankSum=-0.685;QD=21.83;ReadPosRankSum=-1.461;VQSLOD=2.9707;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:44:99:0,122,1676	1/1:0,11:11:30.05:291,30,0	0/0:25,0:21:38:0,38,395	0/0:19,0:15:20.18:0,20,195	0/0:25,0:26:71.71:0,72,989	0/0:17,0:19:47.13:0,47,625	0/0:18,0:18:39.13:0,39,565	1/1:6,31:37:93.07:888,93,0	0/0:17,0:17:42.14:0,42,600	0/0:31,0:32:72.19:0,72,972	0/0:19,0:19:48.16:0,48,695	0/0:22,0:24:65.68:0,66,870	0/0:12,0:12:30.10:0,30,434	0/0:20,0:20:54.18:0,54,778	0/0:23,0:23:60.20:0,60,852	0/0:20,0:20:39.13:0,39,564	0/0:33,0:38:99:0,105,1422	0/0:13,0:14:30.08:0,30,401	1/1:3,21:25:65.76:607,66,0	1/1:0,27:29:65.73:671,66,0	1/1:2,9:13:32.73:292,33,0	0/0:19,0:21:52.21:0,52,705	0/0:13,0:16:44.12:0,44,567	0/0:36,0:36:93.31:0,93,1329	0/0:16,0:16:39.12:0,39,545	0/0:25,0:25:57.15:0,57,803	1/1:5,23:28:59.66:560,60,0	0/0:8,0:9:27.07:0,27,357
chr10	106729388	.	AACC	A	4477.04	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.969;DP=647;FS=1.759;HRun=0;HaplotypeScore=104.2774;InbreedingCoeff=0.9953;MQ=75.59;MQ0=0;MQRankSum=-3.074;QD=31.09;ReadPosRankSum=-0.767;VQSLOD=4.9761;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.62:0,97,1743	1/1:0,7:7:15.05:240,15,0	0/0:28,0:24:57.01:0,57,925	0/0:32,0:30:68.41:0,68,1444	0/0:18,0:18:51.12:0,51,897	0/0:11,0:11:30.07:0,30,519	0/0:34,0:34:99:0,99,1989	1/1:5,32:37:96.10:1240,96,0	0/0:21,0:21:60.17:0,60,1207	0/0:17,0:17:45.14:0,45,918	0/0:11,0:11:27.01:0,27,545	0/0:27,0:27:78.20:0,78,1519	0/0:19,0:19:51.13:0,51,983	0/0:19,0:19:51.16:0,51,1070	0/0:16,0:16:42.14:0,42,926	0/0:20,0:20:54.17:0,54,1136	0/0:35,0:34:99:0,105,2297	0/0:24,0:24:69.24:0,69,1490	1/1:2,23:25:69.03:883,69,0	1/1:3,18:21:46.12:554,46,0	1/1:0,40:40:69.19:1078,69,0	0/0:22,0:22:60.10:0,60,1029	0/0:14,0:15:27.05:0,27,467	0/0:41,0:41:99:0,108,2280	0/0:17,0:17:45.12:0,45,844	0/0:31,0:31:90.23:0,90,1622	1/1:1,13:14:30.10:481,30,0	0/0:11,0:11:21.06:0,21,405
chr10	106729599	.	TAC	T	187.42	PASS	AB=0.902;AC=14;AF=0.259;AN=54;BaseQRankSum=4.484;DP=567;FS=0.821;HRun=0;HaplotypeScore=81.1134;InbreedingCoeff=-0.2429;MQ=51.93;MQ0=11;MQRankSum=2.765;QD=0.69;ReadPosRankSum=0.542;VQSLOD=1.5513;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,1:46:9.45:0,9,458	0/0:13,0:14:8.69:0,9,68	./.	0/0:19,0:11:0:0,0,0	0/1:19,1:20:17.58:18,0,140	0/1:13,1:14:20.60:21,0,101	0/0:30,0:29:15.02:0,15,173	0/0:17,0:15:17.86:0,18,151	1/1:10,0:13:1.25:3,1,0	0/1:18,2:19:9.42:9,0,239	0/1:5,3:8:23.59:24,0,78	0/1:15,3:19:55.72:56,0,197	0/1:9,2:11:79.71:80,0,93	0/0:19,0:20:6.92:0,7,236	0/1:25,2:27:31.66:32,0,307	0/0:11,0:11:6.45:0,6,70	0/1:30,2:33:1.62:2,0,487	0/1:16,1:17:8.66:9,0,198	0/0:16,0:16:28.10:0,28,216	0/0:15,0:15:16.25:0,16,145	0/0:33,0:37:3:0,3,27	0/0:18,0:18:11.79:0,12,175	0/0:6,0:6:3.01:0,3,43	0/1:50,1:51:48.26:48,0,681	0/0:16,2:18:12.03:0,12,158	0/1:20,1:21:11.63:12,0,172	0/0:21,0:19:8.87:0,9,82	0/1:14,1:13:12.38:12,0,172
chr10	106731954	.	A	ACACG	226.81	PASS	AB=1.000;AC=6;AF=0.111;AN=54;BaseQRankSum=6.374;DP=638;FS=10.547;HRun=0;HaplotypeScore=113.4347;InbreedingCoeff=0.1217;MQ=66.72;MQ0=0;MQRankSum=-0.720;QD=2.73;ReadPosRankSum=-1.158;VQSLOD=1.0681;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,105,1742	1/1:9,0:9:2.94:20,3,0	0/0:16,0:15:23.77:0,24,232	0/0:11,0:8:2.16:0,2,45	0/0:22,0:22:61.39:0,61,952	0/0:13,0:13:39.09:0,39,663	0/0:26,0:26:69.17:0,69,1157	0/1:19,0:19:98.17:98,0,122	0/0:30,0:30:72:0,72,1088	0/0:17,0:17:39.04:0,39,586	0/0:12,0:12:30.03:0,30,469	0/0:38,0:38:99:0,105,1777	0/0:32,0:32:81.25:0,81,1404	0/0:27,0:27:66.20:0,66,1126	0/0:33,0:33:93.13:0,93,1535	0/0:18,0:18:48.14:0,48,844	0/0:42,0:42:99:0,108,1820	0/0:27,0:27:72.23:0,72,1288	0/1:20,0:20:63.48:174,0,63	./.	0/1:19,0:19:15.03:15,0,117	0/0:16,0:16:45.15:0,45,804	0/0:18,0:18:39.13:0,39,700	0/0:56,0:56:82.20:0,82,2007	0/0:19,0:19:51:0,51,711	0/0:18,0:18:51.17:0,51,934	0/1:16,0:16:37.02:37,0,49	0/0:13,0:13:36.11:0,36,617
chr10	106731956	.	A	ACG	440.28	PASS	AB=1.000;AC=9;AF=0.173;AN=52;BaseQRankSum=4.869;DP=625;FS=0.730;HRun=0;HaplotypeScore=86.4302;InbreedingCoeff=0.8179;MQ=66.42;MQ0=0;MQRankSum=-1.732;QD=5.57;ReadPosRankSum=-2.843;VQSLOD=2.2660;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:95.94:0,96,1077	0/1:10,0:10:14:14,0,18	0/0:14,0:15:16.58:0,17,136	./.	0/0:19,0:21:53.85:0,54,597	0/0:15,0:15:39.08:0,39,451	0/0:27,0:27:69.07:0,69,747	1/1:7,9:16:23.29:167,23,0	0/0:28,0:30:56.94:0,57,632	0/0:15,0:15:29.99:0,30,304	0/0:12,0:12:24.04:0,24,265	0/0:38,0:38:96.20:0,96,1114	0/0:31,0:31:75.17:0,75,907	0/0:28,0:28:66.01:0,66,702	0/0:34,0:34:78.15:0,78,896	0/0:17,0:17:27.01:0,27,497	0/0:40,0:40:99:0,99,1134	0/0:25,0:25:68.78:0,69,754	1/1:19,0:19:35.30:280,35,0	./.	1/1:19,0:19:8.77:68,9,0	0/0:16,0:16:45.04:0,45,484	0/0:18,0:18:38.13:0,38,437	0/0:51,0:51:64.14:0,64,1192	0/0:19,0:19:32.93:0,33,356	0/0:19,0:19:54.16:0,54,664	1/1:15,0:15:5.59:62,6,0	0/0:13,0:13:33.08:0,33,402
chr10	106731966	.	G	GCGCGCACACACACACACAC	4579.97	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=5.903;DP=656;FS=1.868;HRun=0;HaplotypeScore=321.4177;InbreedingCoeff=0.8875;MQ=60.67;MQ0=4;MQRankSum=-6.156;QD=44.04;ReadPosRankSum=-2.079;VQSLOD=3.1587;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,4699	1/1:11,0:11:17.83:863,18,0	0/0:18,0:12:26.42:0,26,383	0/0:10,0:2:0.47:0,0,1	0/0:19,0:19:57.18:0,57,2537	0/0:14,0:14:42.14:0,42,1938	0/0:29,0:29:82.79:0,83,3264	1/1:21,0:20:35.16:967,35,0	0/0:30,0:30:61.26:0,61,3020	0/0:20,0:19:48.16:0,48,1519	0/0:11,0:11:30.09:0,30,1000	0/0:40,0:40:99:0,111,4471	0/0:35,0:35:93.32:0,93,4475	0/0:27,0:28:81.23:0,81,3156	0/0:34,0:35:99:0,102,4135	0/0:22,0:22:66.19:0,66,2505	0/0:39,0:39:99:0,114,4856	0/0:30,0:30:87.25:0,87,3214	1/1:21,0:20:42.63:1153,43,0	1/1:14,0:13:6.02:276,6,0	0/1:22,0:22:0.24:252,0,0	0/0:18,0:18:54.18:0,54,1898	0/0:15,0:15:42.10:0,42,1791	0/0:42,0:43:99:0,123,5301	0/0:17,0:17:42.14:0,42,1761	0/0:26,0:26:78.27:0,78,3520	1/1:8,1:15:20.51:1069,21,0	0/0:13,0:14:39.13:0,39,1806
chr10	106732475	.	A	AGT	1503.89	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.908;DP=996;FS=75.704;HRun=0;HaplotypeScore=178.2218;InbreedingCoeff=0.9416;MQ=59.20;MQ0=6;MQRankSum=-8.327;QD=7.30;ReadPosRankSum=-4.835;VQSLOD=-0.3517;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,1548	1/1:10,0:10:4.49:29,4,0	0/0:38,0:24:22.73:0,23,262	0/0:60,0:34:70.77:0,71,770	0/0:14,0:14:36.12:0,36,466	0/0:15,0:15:35.75:0,36,449	0/0:46,0:46:99:0,132,1694	1/1:22,1:23:25.76:243,26,0	0/0:45,0:45:99:0,117,1462	0/0:44,0:44:99:0,106,1482	0/0:8,0:8:21.07:0,21,273	0/0:65,0:65:99:0,169,2148	0/0:30,0:30:84.21:0,84,1030	0/0:48,0:48:99:0,117,1488	0/0:33,0:33:78.25:0,78,1011	0/0:36,0:36:74.34:0,74,1192	0/0:45,0:45:99:0,105,1363	0/0:43,0:43:99:0,108,1381	1/1:17,1:17:31.65:289,32,0	1/1:7,0:7:6.02:102,6,0	1/1:132,3:130:83.85:977,84,0	0/0:20,0:20:57.19:0,57,740	0/0:15,0:15:39.01:0,39,470	0/0:71,0:70:99:0,162,2064	0/0:20,0:20:54.17:0,54,691	0/0:34,0:34:93.27:0,93,1160	1/1:13,0:12:12.40:39,12,0	0/0:17,0:17:48.10:0,48,579
chr10	106732483	.	TGC	T	1964.28	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.622;DP=969;FS=64.335;HRun=0;HaplotypeScore=165.8880;InbreedingCoeff=0.8941;MQ=60.51;MQ0=6;MQRankSum=-6.044;QD=10.13;ReadPosRankSum=-5.568;VQSLOD=0.6394;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,2363	1/1:3,6:9:5.49:53,5,0	0/0:38,0:23:50.81:0,51,626	0/0:59,0:33:81.08:0,81,1213	0/0:12,0:12:36.12:0,36,691	0/0:14,0:14:38.72:0,39,674	0/0:50,0:50:99:0,150,2662	1/1:13,13:26:65.39:598,65,0	0/0:43,0:43:99:0,120,2119	0/0:42,0:42:99:0,126,2305	0/0:8,0:8:24.03:0,24,423	0/0:66,0:66:99:0,195,3454	0/0:30,0:30:90.26:0,90,1543	0/0:44,0:44:99:0,117,2165	0/0:30,0:30:84.17:0,84,1498	0/0:37,0:37:99:0,102,1794	0/0:40,0:40:99:0,111,2043	0/0:39,0:39:99:0,114,2112	1/1:6,8:13:0.17:347,0,0	1/1:3,5:8:5.49:35,5,0	1/1:65,59:118:87.40:884,87,0	0/0:21,0:21:63.18:0,63,1123	0/0:14,0:14:39.13:0,39,729	0/0:67,0:66:99:0,183,3268	0/0:23,0:23:63.02:0,63,1108	0/0:33,0:33:99:0,99,1781	1/1:2,11:12:23.20:214,23,0	0/0:19,0:19:54.05:0,54,887
chr10	106732487	.	TGC	T	1125.70	PASS	AB=0.556;AC=11;AF=0.196;AN=56;BaseQRankSum=12.031;DP=939;FS=54.814;HRun=0;HaplotypeScore=161.2034;InbreedingCoeff=0.8051;MQ=61.90;MQ0=6;MQRankSum=-5.706;QD=6.40;ReadPosRankSum=-4.590;VQSLOD=0.6605;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,2409	1/1:3,5:8:2.49:26,2,0	0/0:39,0:23:51.73:0,52,729	0/0:55,0:32:65.63:0,66,896	0/0:12,0:12:36.12:0,36,647	0/0:14,0:14:38.81:0,39,685	0/0:53,0:53:99:0,159,2754	1/1:12,12:24:57.93:490,58,0	0/0:41,0:41:99:0,102,1820	0/0:44,0:44:99:0,123,2128	0/0:8,0:8:24.08:0,24,439	0/0:65,0:65:99:0,184,3200	0/0:27,0:27:69.24:0,69,1218	0/0:41,0:41:99:0,105,1877	0/0:29,0:29:69.16:0,69,1147	0/0:34,0:34:87.24:0,87,1522	0/0:40,0:40:99:0,105,1834	0/0:39,0:39:99:0,117,2062	0/1:2,8:9:23.95:177,0,24	1/1:4,4:8:4.07:13,4,0	1/1:68,45:108:52.31:388,52,0	0/0:20,0:20:57.19:0,57,1002	0/0:14,0:14:39.13:0,39,702	0/0:67,0:66:99:0,184,3247	0/0:25,0:25:69.21:0,69,1231	0/0:30,0:30:87.28:0,87,1504	1/1:1,11:12:22.21:194,22,0	0/0:19,0:19:54.16:0,54,912
chr10	106732507	.	G	GTC	447.55	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=8.327;DP=1001;FS=4.424;HRun=0;HaplotypeScore=176.0340;InbreedingCoeff=0.2269;MQ=60.82;MQ0=8;MQRankSum=-4.781;QD=6.49;ReadPosRankSum=-1.093;VQSLOD=3.2262;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,144,1934	0/1:10,0:10:6.68:7,0,14	0/0:39,0:18:27.54:0,28,248	0/0:44,0:23:27.71:0,28,294	0/0:17,0:17:51.14:0,51,674	0/0:21,0:21:63.19:0,63,869	0/0:61,0:61:99:0,175,2258	0/1:23,0:19:60.87:240,0,61	0/0:49,0:49:99:0,132,1648	0/0:49,0:49:99:0,129,1596	0/0:8,0:8:24.08:0,24,343	0/0:66,0:66:99:0,174,2309	0/0:26,0:26:75.21:0,75,1015	0/0:46,0:46:99:0,100,1588	0/0:36,0:36:95.63:0,96,1229	0/0:31,0:31:87.26:0,87,1197	0/0:45,0:45:99:0,115,1506	0/0:39,0:39:99:0,109,1399	0/1:12,0:9:20.88:131,0,21	1/1:12,0:12:5.78:57,6,0	0/0:97,4:95:30.18:0,30,254	0/0:22,0:22:51.14:0,51,693	0/0:16,0:16:33.11:0,33,465	0/0:66,0:65:99:0,183,2408	0/0:37,0:37:99:0,99,1304	0/0:41,0:41:67.99:0,68,1247	0/1:12,0:12:13.94:131,0,14	0/0:20,0:20:57.14:0,57,767
chr10	106732509	.	C	CTG	1040.48	PASS	AB=0.775;AC=10;AF=0.179;AN=56;BaseQRankSum=5.528;DP=1037;FS=4.095;HRun=0;HaplotypeScore=179.9163;InbreedingCoeff=0.7093;MQ=59.94;MQ0=10;MQRankSum=-5.345;QD=8.97;ReadPosRankSum=-2.297;VQSLOD=2.8211;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,129,1601	1/1:4,7:11:5.32:32,5,0	0/0:40,0:17:14.44:0,14,108	0/1:42,0:23:4.22:4,0,108	0/0:19,0:19:48.15:0,48,602	0/0:21,0:21:63.18:0,63,779	0/0:58,0:61:99:0,150,1809	1/1:10,14:19:36.12:587,36,0	0/0:53,0:54:99:0,102,1239	0/0:54,0:54:96.06:0,96,1143	0/0:9,0:9:24.07:0,24,294	0/0:65,0:67:99:0,165,1960	0/0:30,0:30:75.12:0,75,882	0/0:47,0:47:70.62:0,71,1288	0/0:39,0:39:56.23:0,56,954	0/0:31,0:31:84.25:0,84,1035	0/0:44,0:45:72.13:0,72,1167	0/0:39,0:40:68.66:0,69,1050	0/1:2,9:8:19.08:230,0,19	1/1:1,11:12:5.80:99,6,0	0/0:80,24:97:13.06:0,13,98	0/0:23,0:23:36.17:0,36,590	0/0:16,0:16:39.07:0,39,460	0/0:67,0:66:99:0,156,1931	0/0:34,2:37:66.10:0,66,1002	0/0:44,0:44:52.73:0,53,1071	1/1:5,8:13:15.04:240,15,0	0/0:20,0:21:56.62:0,57,634
chr10	106732515	.	G	GTA	449.60	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=8.393;DP=1030;FS=2.386;HRun=0;HaplotypeScore=170.2028;InbreedingCoeff=0.3949;MQ=58.47;MQ0=15;MQRankSum=-5.663;QD=6.33;ReadPosRankSum=-0.365;VQSLOD=2.9391;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:51:99:0,150,2105	0/1:11,0:11:10:16,0,10	0/0:42,0:15:9.36:0,9,198	0/0:43,0:19:39.80:0,40,342	0/0:21,0:21:63.11:0,63,849	0/0:22,0:22:66.18:0,66,980	0/0:60,1:61:99:0,174,2422	0/1:24,0:19:99:233,0,104	0/0:50,0:50:99:0,126,1718	0/0:52,0:52:99:0,137,1810	0/0:9,0:9:27.07:0,27,389	0/0:66,0:66:99:0,189,2636	0/0:33,0:33:93:0,93,1261	0/0:47,0:47:99:0,103,1693	0/0:40,0:40:99:0,111,1447	0/0:35,0:35:99:0,99,1397	0/0:44,0:44:99:0,118,1658	0/0:39,1:40:73.58:0,74,1446	0/1:11,0:7:27.71:133,0,28	1/1:13,0:13:5.78:58,6,0	0/0:78,15:87:21.83:0,22,188	0/0:24,0:24:62.57:0,63,832	0/0:16,0:16:45.12:0,45,638	0/0:67,0:66:99:0,177,2538	0/0:35,1:36:97.75:0,98,1358	0/0:43,0:43:99:0,103,1670	1/1:12,0:12:3.03:134,3,0	0/0:22,0:22:63.11:0,63,872
chr10	106732520	.	T	TGC	501.02	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=8.922;DP=1016;FS=3.274;HRun=0;HaplotypeScore=169.6056;InbreedingCoeff=0.3851;MQ=57.76;MQ0=18;MQRankSum=-4.952;QD=4.14;ReadPosRankSum=-2.523;VQSLOD=2.7680;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:54:99:0,150,1908	0/1:14,0:14:11.31:16,0,11	0/1:42,0:10:4.74:5,0,76	0/0:40,0:17:25.43:0,25,212	0/0:22,0:22:63.12:0,63,788	0/0:22,0:22:63.20:0,63,882	0/0:57,1:58:99:0,162,2058	0/1:25,0:20:58.72:291,0,59	0/0:48,0:48:99:0,105,1419	0/0:46,0:46:99:0,126,1585	0/0:9,0:9:27.06:0,27,347	0/0:65,0:65:99:0,177,2357	0/0:34,0:34:93.01:0,93,1179	0/0:48,0:48:99:0,116,1637	0/0:37,0:37:96.15:0,96,1242	0/0:34,0:34:96.20:0,96,1272	0/0:41,0:41:99:0,107,1476	0/0:40,1:41:76.62:0,77,1355	0/1:14,0:8:19.67:129,0,20	1/1:14,0:14:6.15:57,6,0	0/0:73,15:84:11.81:0,12,90	0/0:23,0:23:59.75:0,60,771	0/0:19,0:19:54.11:0,54,678	0/0:64,0:63:99:0,171,2268	0/0:34,1:35:82.79:0,83,1140	0/0:43,0:43:99:0,105,1580	1/1:12,0:12:8.96:136,9,0	0/0:22,0:22:60.11:0,60,770
chr10	106732551	.	CTG	C	983.80	PASS	AB=0.692;AC=8;AF=0.143;AN=56;BaseQRankSum=6.212;DP=1067;FS=2.991;HRun=0;HaplotypeScore=176.0718;InbreedingCoeff=0.6279;MQ=52.92;MQ0=33;MQRankSum=-5.087;QD=6.43;ReadPosRankSum=-2.546;VQSLOD=2.7169;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:54:99:0,144,2311	0/1:5,10:15:9.02:92,0,9	0/0:57,0:9:12.51:0,13,179	0/0:64,0:11:20.34:0,20,200	0/0:23,0:23:63.22:0,63,1038	0/0:22,1:23:10.28:0,10,685	0/0:61,2:63:71.76:0,72,2268	1/1:10,17:26:63.20:794,63,0	0/0:44,1:45:99:0,102,1652	0/0:54,0:53:99:0,138,2192	0/0:9,0:9:21.07:0,21,329	0/0:67,0:67:99:0,165,2677	0/0:35,0:35:87.28:0,87,1426	0/0:55,1:56:79.37:0,79,1821	0/0:33,2:35:11.62:0,12,1262	0/0:29,0:29:55.35:0,55,944	0/0:37,1:38:99:0,104,1623	0/0:41,0:41:99:0,99,1605	1/1:5,3:5:2.27:70,2,0	0/0:12,13:24:4.88:0,5,17	0/1:63,24:82:1.88:8,0,2	0/0:24,0:23:60.20:0,60,978	0/0:20,0:20:45.15:0,45,738	0/0:58,0:58:99:0,144,2373	0/0:27,0:27:72.25:0,72,1196	0/0:45,0:44:99:0,108,1740	1/1:8,8:16:3.25:152,3,0	0/0:20,0:20:60.21:0,60,997
chr10	106732575	.	TGC	T	460.41	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=5.411;DP=1041;FS=4.170;HRun=0;HaplotypeScore=184.2561;InbreedingCoeff=0.7048;MQ=58.80;MQ0=15;MQRankSum=-3.551;QD=2.50;ReadPosRankSum=-4.774;VQSLOD=0.7215;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,168,2980	1/1:14,0:14:8.60:40,9,0	0/0:65,0:20:32.99:0,33,609	0/0:63,0:21:24.80:0,25,452	0/0:25,0:25:75.23:0,75,1359	0/0:22,0:22:63.17:0,63,1174	0/0:54,1:55:99:0,144,2549	0/1:25,0:25:99:161,0,147	0/0:43,0:43:99:0,114,2020	0/0:51,0:51:99:0,146,2513	0/0:5,0:5:15.05:0,15,284	0/0:59,0:59:99:0,162,2834	0/0:38,0:38:99:0,105,1835	0/0:57,0:57:99:0,156,2602	0/0:37,0:37:99:0,99,1814	0/0:26,0:26:54.14:0,54,1237	0/0:35,1:36:96.30:0,96,1810	0/0:33,0:34:99:0,101,1808	0/1:11,0:10:49.05:85,0,49	1/1:23,1:24:9.04:69,9,0	1/1:92,1:85:20.63:177,21,0	0/0:24,0:24:66.13:0,66,1126	0/0:15,0:15:42.14:0,42,807	0/0:63,0:63:99:0,177,3107	0/0:21,0:20:63.17:0,63,1102	0/0:41,0:40:99:0,111,1989	1/1:17,0:17:9.91:86,10,0	0/0:19,0:19:54.19:0,54,1034
chr10	106732577	.	C	CGTCTCTGTGTGTGT	4039.07	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.150;DP=1024;FS=3.030;HRun=0;HaplotypeScore=381.8885;InbreedingCoeff=0.9900;MQ=59.25;MQ0=11;MQRankSum=-6.690;QD=22.44;ReadPosRankSum=-5.378;VQSLOD=0.4603;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,171,5743	1/1:12,1:13:21.28:835,21,0	0/0:59,0:20:29.80:0,30,697	0/0:56,0:23:21.31:0,21,541	0/0:25,0:25:72.22:0,72,2386	0/0:24,0:24:63.17:0,63,2165	0/0:54,0:54:99:0,144,4680	1/1:26,0:26:62.90:931,63,0	0/0:44,0:44:99:0,111,3563	0/0:50,0:50:99:0,140,4621	0/0:5,0:5:15.05:0,15,595	0/0:57,0:57:99:0,159,5052	0/0:37,0:37:99:0,105,3405	0/0:54,0:54:99:0,144,4538	0/0:34,0:34:93.26:0,93,3256	0/0:27,0:27:68.80:0,69,2297	0/0:35,0:35:99:0,99,3466	0/0:34,0:34:98.70:0,99,3492	1/1:14,0:13:30.02:609,30,0	1/1:20,5:25:13.81:480,14,0	1/1:79,0:74:22.57:309,23,0	0/0:25,0:25:63.12:0,63,2109	0/0:15,0:15:42.14:0,42,1627	0/0:65,0:65:99:0,174,5539	0/0:21,0:20:60.17:0,60,1833	0/0:38,0:37:99:0,102,3569	1/1:19,1:20:27.43:874,27,0	0/0:20,0:20:54.19:0,54,1840
chr10	106732636	.	ATG	A	2545.37	PASS	AB=0.716;AC=6;AF=0.107;AN=56;BaseQRankSum=10.240;DP=1079;FS=7.841;HRun=0;HaplotypeScore=184.9385;InbreedingCoeff=-0.1203;MQ=62.71;MQ0=6;MQRankSum=-5.353;QD=8.69;ReadPosRankSum=-3.225;VQSLOD=2.1037;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,148,2519	0/1:8,10:18:99:239,0,174	0/0:31,0:18:20.74:0,21,535	0/0:51,0:39:88.85:0,89,1415	0/0:18,0:18:48.14:0,48,778	0/0:20,0:20:54.15:0,54,862	0/0:55,0:55:99:0,154,2632	0/1:39,22:59:99:701,0,1412	0/0:39,0:39:99:0,108,1338	0/0:48,0:47:99:0,126,2114	0/0:11,0:11:30.01:0,30,520	0/0:74,0:74:99:0,211,3614	0/0:37,0:37:99:0,102,1759	0/0:49,0:49:99:0,132,2273	0/0:31,0:31:81.28:0,81,1403	0/0:32,0:32:90.29:0,90,1530	0/0:42,0:42:99:0,114,1974	0/0:28,0:28:78.25:0,78,1313	0/1:23,8:31:99:287,0,696	0/1:19,10:28:99:164,0,327	0/1:76,55:125:99:1008,0,1522	0/0:20,0:20:45.15:0,45,779	0/0:16,0:16:36.12:0,36,623	0/0:57,0:57:99:0,148,2546	0/0:23,0:22:66.21:0,66,1112	0/0:33,0:32:87.29:0,87,1482	0/1:12,11:22:99:271,0,366	0/0:9,0:9:27.09:0,27,468
chr10	106732901	.	G	GGGACAGTCTGCAT	13399.39	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-0.455;DP=703;FS=7.183;HRun=0;HaplotypeScore=256.3581;InbreedingCoeff=0.9173;MQ=85.44;MQ0=0;MQRankSum=-12.191;QD=93.05;ReadPosRankSum=-3.144;VQSLOD=2.8779;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,141,5225	1/1:2,2:6:6.02:391,6,0	0/0:24,0:24:57.17:0,57,1435	0/0:25,0:26:57.16:0,57,1834	0/0:14,0:14:30.10:0,30,1152	0/0:21,0:21:60.21:0,60,2209	0/0:33,0:33:84.26:0,84,3008	1/1:31,3:39:99:5365,99,0	0/0:29,0:29:87.25:0,87,3024	0/0:35,0:35:99:0,99,3698	0/0:5,0:5:15.05:0,15,579	0/0:30,0:30:84.27:0,84,3052	0/0:24,0:24:60.17:0,60,2112	0/0:22,0:22:60.18:0,60,2063	0/0:30,0:30:84.27:0,84,2904	0/0:22,0:22:63.20:0,63,2279	0/0:34,0:34:90.31:0,90,3493	0/0:37,0:37:99:0,111,4258	1/1:10,4:17:42.10:1776,42,0	1/1:2,2:6:3.01:195,3,0	1/1:34,16:58:50.91:2863,51,0	0/0:15,0:15:42.14:0,42,1616	0/0:14,0:14:36.11:0,36,1218	0/0:41,0:41:99:0,108,4000	0/0:27,0:27:75.26:0,75,2827	0/0:19,0:19:51.18:0,51,1728	1/1:11,7:18:48.16:2809,48,0	0/0:2,0:2:6.02:0,6,236
chr10	106733933	.	GT	G	2614.97	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.750;DP=496;FS=7.008;HRun=2;HaplotypeScore=55.5827;InbreedingCoeff=0.9953;MQ=78.78;MQ0=0;MQRankSum=-1.436;QD=34.87;ReadPosRankSum=-1.282;VQSLOD=3.2489;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.28:0,87,1283	1/1:1,7:8:21.07:273,21,0	0/0:18,0:18:33.49:0,33,639	0/0:20,0:19:44.78:0,45,706	0/0:9,0:9:24.08:0,24,350	0/0:18,0:18:51.17:0,51,760	0/0:25,0:25:75.22:0,75,1083	1/1:0,10:10:30.06:359,30,0	0/0:16,0:16:48.16:0,48,717	0/0:19,0:19:57.19:0,57,850	0/0:9,0:9:24.08:0,24,360	0/0:26,0:26:75.25:0,75,1121	0/0:22,0:22:60.15:0,60,853	0/0:23,0:23:69.22:0,69,1011	0/0:20,0:20:60.20:0,60,899	0/0:30,0:30:90.30:0,90,1341	0/0:23,0:23:63.17:0,63,895	0/0:31,0:31:93.21:0,93,1322	1/1:0,10:10:30.10:389,30,0	1/1:0,6:6:18.06:233,18,0	1/1:0,29:29:84.27:1087,84,0	0/0:9,0:9:24.08:0,24,358	0/0:10,0:10:30.09:0,30,429	0/0:24,0:24:72.24:0,72,1079	0/0:10,0:10:27.09:0,27,404	0/0:22,0:22:66.22:0,66,989	1/1:0,12:12:36.12:461,36,0	0/0:8,0:8:24.08:0,24,360
chr10	106734946	.	A	AG	770.28	PASS	AB=0.883;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.042;DP=519;FS=26.804;HRun=0;HaplotypeScore=63.7579;InbreedingCoeff=0.0358;MQ=67.54;MQ0=20;MQRankSum=4.203;QD=7.70;ReadPosRankSum=2.557;VQSLOD=1.6877;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,829	1/1:1,3:5:0.53:55,1,0	0/0:52,0:14:11.96:0,12,146	0/0:35,0:13:5.04:0,5,87	0/0:10,0:10:17.57:0,18,121	0/0:21,0:21:52.75:0,53,357	0/0:16,0:16:38.96:0,39,337	0/1:11,11:21:63.24:198,0,63	0/0:14,0:14:40.41:0,40,284	0/0:18,0:18:41.39:0,41,368	0/0:8,0:8:20.11:0,20,157	0/0:18,0:18:25.37:0,25,280	0/0:18,0:18:44.29:0,44,353	0/0:16,0:16:38.80:0,39,319	0/0:16,0:16:42.05:0,42,309	0/0:8,0:7:17.51:0,18,145	0/0:28,0:28:68.92:0,69,533	0/0:25,0:24:60.92:0,61,492	0/1:18,8:25:99:147,0,135	0/1:13,0:13:25.65:176,0,26	0/1:13,0:13:29.98:184,0,30	0/0:9,0:9:22.79:0,23,162	0/0:7,0:7:17.35:0,17,114	0/0:11,0:11:25.78:0,26,209	0/0:15,0:15:34.21:0,34,267	0/0:20,0:20:46.82:0,47,367	0/1:20,0:20:69.67:135,0,70	0/0:18,0:16:38.22:0,38,246
chr10	106735708	.	CTGTGTG	C	455.90	PASS	AB=0.915;AC=10;AF=0.192;AN=52;BaseQRankSum=2.032;DP=628;FS=10.369;HRun=0;HaplotypeScore=129.7972;InbreedingCoeff=0.5300;MQ=59.35;MQ0=19;MQRankSum=-0.769;QD=3.83;ReadPosRankSum=-0.649;VQSLOD=1.6400;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:42.12:0,42,1022	1/1:3,1:4:3.01:61,3,0	./.	0/0:47,0:23:3.01:0,3,39	0/0:12,0:13:12.04:0,12,385	0/0:24,0:25:32.27:0,32,719	0/0:31,0:32:41.31:0,41,1142	0/1:15,0:14:10.11:83,0,10	0/0:16,0:16:12.04:0,12,303	0/0:18,0:18:25.64:0,26,561	./.	0/0:33,0:34:60.16:0,60,1288	0/0:15,0:15:9.50:0,10,286	0/0:17,0:20:32.64:0,33,714	0/0:19,0:19:18.06:0,18,432	0/0:12,0:12:20.96:0,21,391	0/0:29,0:29:51.12:0,51,1220	0/0:35,0:42:69.16:0,69,1555	1/1:23,1:20:4.76:97,5,0	1/1:5,3:8:3.48:62,3,0	0/1:43,11:52:7:123,0,7	0/0:13,0:13:3.01:0,3,95	0/0:7,0:7:9.03:0,9,189	0/0:23,0:24:47.17:0,47,1142	0/0:10,0:10:9.03:0,9,291	0/0:29,0:29:53.26:0,53,1023	1/1:14,0:14:9.03:166,9,0	0/0:14,0:14:15.05:0,15,258
chr10	106736012	.	AAC	A	202.51	PASS	AB=0.903;AC=17;AF=0.386;AN=44;BaseQRankSum=5.224;DP=448;FS=8.196;HRun=0;HaplotypeScore=64.1315;InbreedingCoeff=-0.1899;MQ=75.54;MQ0=8;MQRankSum=0.023;QD=0.78;ReadPosRankSum=0.265;VQSLOD=0.5468;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,2:38:7.41:7,0,311	0/1:7,1:8:26.22:26,0,38	./.	./.	0/0:8,0:8:2.99:0,3,24	0/0:13,0:13:9.03:0,9,122	0/1:18,4:22:20.21:20,0,101	1/1:17,0:17:0.47:1,0,0	0/1:14,1:15:8.27:8,0,178	0/1:10,1:11:20.21:20,0,110	./.	0/1:17,3:20:17.24:17,0,102	0/0:6,0:6:5.96:0,6,45	0/0:8,0:8:3.01:0,3,44	0/0:11,0:11:0.47:0,0,1	0/0:15,0:14:11.99:0,12,134	0/1:16,2:19:54.53:55,0,136	0/0:24,0:24:33.84:0,34,340	./.	1/1:4,2:6:3:32,3,0	0/1:30,4:35:2.13:67,0,2	0/0:8,0:8:8.95:0,9,86	./.	0/1:20,1:21:5.17:5,0,300	0/1:10,2:12:26.22:26,0,38	0/1:27,0:27:11.48:11,0,176	./.	1/1:7,1:8:3:32,3,0
chr10	106736928	.	T	TC	3503.14	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=12.871;DP=652;FS=11.902;HRun=0;HaplotypeScore=69.1119;InbreedingCoeff=0.9064;MQ=61.96;MQ0=0;MQRankSum=-9.633;QD=27.16;ReadPosRankSum=-1.177;VQSLOD=2.8203;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1435	1/1:0,7:7:14.88:223,15,0	0/0:27,0:17:48.12:0,48,623	0/1:19,0:10:8.56:9,0,233	0/0:26,0:26:75.25:0,75,1049	0/0:20,0:20:60.20:0,60,839	0/0:16,0:16:48.06:0,48,608	1/1:0,21:21:39.13:581,39,0	0/0:28,0:28:84.28:0,84,1174	0/0:30,0:30:90.30:0,90,1252	0/0:20,0:20:60.20:0,60,839	0/0:41,0:41:99:0,123,1718	0/0:15,0:15:39.13:0,39,543	0/0:20,0:20:60.20:0,60,839	0/0:25,0:25:75.24:0,75,1031	0/0:21,0:21:60.19:0,60,822	0/0:35,0:35:99:0,99,1383	0/0:43,1:44:87.65:0,88,1759	1/1:0,17:17:45.15:672,45,0	1/1:0,25:25:42.14:629,42,0	1/1:0,9:9:18.06:270,18,0	0/0:15,0:15:45.15:0,45,629	0/0:15,0:15:45.13:0,45,596	0/0:23,0:23:69.23:0,69,965	0/0:23,0:23:69.23:0,69,965	0/0:33,0:33:99:0,99,1352	1/1:0,31:31:75.25:1119,75,0	0/0:10,0:10:30.09:0,30,401
chr10	106737951	.	GCGCTCTTAGCCCCTGAGACGCTCTTAGCCCCTGAGA	G	2391.17	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=0.701;DP=451;FS=9.664;HRun=0;HaplotypeScore=372.7648;InbreedingCoeff=0.8849;MQ=65.84;MQ0=0;MQRankSum=-5.783;QD=35.16;ReadPosRankSum=0.611;VQSLOD=0.6596;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:54.18:0,54,5545	1/1:0,5:5:6.02:547,6,0	0/0:22,0:22:30.98:0,31,1248	0/0:25,0:25:49.02:0,49,2333	0/0:17,0:17:39.11:0,39,4417	0/0:18,0:18:36.12:0,36,3836	0/0:23,0:23:51.16:0,51,5008	1/1:14,0:14:24.08:401,24,0	0/0:16,0:16:45.15:0,45,5659	0/0:13,0:13:30.10:0,30,2934	0/0:10,0:10:21.07:0,21,1922	0/0:19,0:19:57.20:0,57,7286	0/0:20,0:20:51.17:0,51,5771	0/0:13,0:13:27.09:0,27,3454	0/0:14,0:14:36.12:0,36,5352	0/0:14,0:14:36.12:0,36,4813	0/0:19,0:19:51.17:0,51,5978	0/0:29,0:29:75.26:0,75,8469	1/1:6,5:11:15.05:451,15,0	1/1:6,7:13:3.01:273,3,0	1/1:15,0:15:5.98:65,6,0	0/0:5,0:5:9.03:0,9,1418	0/0:11,0:11:33.11:0,33,3356	0/0:29,0:29:67.66:0,68,8933	0/0:6,0:6:18.06:0,18,2166	0/0:17,0:17:33.11:0,33,3920	1/1:5,5:10:8.44:819,8,0	0/0:13,0:13:39.13:0,39,6033
chr10	106737970	.	C	CG	509.26	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-0.257;DP=413;FS=3.560;HRun=1;HaplotypeScore=58.8034;InbreedingCoeff=0.8150;MQ=64.82;MQ0=1;MQRankSum=-3.730;QD=24.25;ReadPosRankSum=-2.797;VQSLOD=2.8727;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:66.21:0,66,856	0/0:5,0:5:4.07:0,4,12	0/0:18,0:16:22.35:0,22,454	0/0:21,0:21:57.14:0,57,698	0/0:16,0:16:48.13:0,48,605	0/0:14,0:14:36.12:0,36,467	0/0:20,0:20:54.16:0,54,686	1/1:0,8:8:24.08:357,24,0	0/0:15,0:15:45.15:0,45,584	0/0:15,0:15:45.15:0,45,584	0/0:10,0:10:27.09:0,27,349	0/0:19,0:19:57.19:0,57,740	0/0:19,0:19:57.19:0,57,739	0/0:10,0:10:30.10:0,30,389	0/0:15,0:15:42.14:0,42,544	0/0:16,0:16:48.16:0,48,628	0/0:19,0:19:54.18:0,54,701	0/0:31,0:31:87.28:0,87,1132	1/1:6,0:6:11.03:216,11,0	0/0:8,0:8:2.04:0,2,6	1/1:0,7:7:5.98:65,6,0	0/0:5,0:5:15.05:0,15,195	0/0:15,0:15:45.15:0,45,581	0/0:28,0:28:69.22:0,69,895	0/0:8,0:8:21.07:0,21,273	0/0:15,0:15:42.14:0,42,545	0/0:7,0:7:6.11:0,6,18	0/0:15,0:15:45.15:0,45,584
chr10	106740505	.	AC	A	5283.39	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=17.244;DP=742;FS=1.477;HRun=4;HaplotypeScore=87.2980;InbreedingCoeff=0.9999;MQ=82.79;MQ0=0;MQRankSum=-3.486;QD=32.41;ReadPosRankSum=-0.738;VQSLOD=4.8481;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,1749	1/1:0,10:10:30.09:358,30,0	0/0:26,0:26:78.25:0,78,1058	0/0:19,0:19:51.97:0,52,619	0/0:20,0:20:54.18:0,54,748	0/0:17,0:17:45.15:0,45,630	0/0:24,0:24:66.18:0,66,897	1/1:0,34:34:99:1175,99,0	0/0:23,0:23:69.21:0,69,929	0/0:19,0:19:57.18:0,57,781	0/0:18,0:18:54.18:0,54,755	0/0:34,0:34:99:0,102,1376	0/0:26,0:26:75.25:0,75,1045	0/0:22,0:22:60.17:0,60,787	0/0:33,0:33:96.29:0,96,1319	0/0:27,0:27:78.25:0,78,1072	0/0:49,0:49:99:0,144,2003	0/0:35,0:35:93.27:0,93,1276	1/1:5,16:21:48.13:564,48,0	1/1:2,19:21:51.15:605,51,0	1/1:1,54:55:99:1866,152,0	0/0:30,0:30:87.27:0,87,1183	0/0:17,0:17:42.13:0,42,564	0/0:31,0:31:90.30:0,90,1260	0/0:21,0:21:57.19:0,57,798	0/0:32,0:32:87.29:0,87,1207	1/1:0,22:22:60.18:716,60,0	0/0:12,0:12:36.12:0,36,504
chr10	106741133	.	TG	T	1363.64	PASS	AB=0.972;AC=15;AF=0.268;AN=56;BaseQRankSum=5.127;DP=483;FS=16.731;HRun=10;HaplotypeScore=62.1423;InbreedingCoeff=0.7279;MQ=86.52;MQ0=2;MQRankSum=-0.678;QD=9.40;ReadPosRankSum=1.285;VQSLOD=0.7792;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:69.15:0,69,737	1/1:3,3:6:8.98:78,9,0	0/0:29,0:21:25.79:0,26,178	0/1:27,0:21:0.44:0,0,126	0/0:15,0:15:26.84:0,27,243	0/0:19,0:19:42.05:0,42,428	0/0:16,0:16:42.50:0,42,424	1/1:6,11:17:31.67:274,32,0	0/1:18,0:18:22.13:22,0,96	0/0:16,0:16:13.09:0,13,226	0/0:9,0:9:20.90:0,21,190	0/0:17,0:17:39.05:0,39,393	0/0:13,0:13:33.06:0,33,347	0/0:11,0:11:24.03:0,24,248	0/0:17,0:17:39:0,39,397	0/0:12,0:12:9.23:0,9,291	0/0:30,1:31:73.05:0,73,775	0/0:24,2:26:34.15:0,34,603	1/1:5,10:15:21.03:261,21,0	1/1:1,11:12:9.45:228,9,0	1/1:3,15:18:32.98:286,33,0	0/0:16,0:16:32.99:0,33,307	0/0:12,0:12:24.49:0,24,233	0/0:17,0:17:42.09:0,42,447	0/0:14,1:15:7.90:0,8,277	0/0:11,0:11:27.01:0,27,264	1/1:3,17:20:45.41:390,45,0	0/1:10,1:11:7.92:8,0,148
chr10	106741319	.	CCA	C	42.27	PASS	AB=0.926;AC=6;AF=0.125;AN=48;BaseQRankSum=2.735;DP=488;FS=9.349;HRun=0;HaplotypeScore=63.9483;InbreedingCoeff=-0.0224;MQ=57.45;MQ0=7;MQRankSum=0.466;QD=0.49;ReadPosRankSum=0.725;VQSLOD=0.4069;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:8.99:0,9,74	0/0:5,0:5:2.99:0,3,24	./.	./.	./.	0/1:16,3:19:49.45:49,0,94	0/0:27,0:27:2.85:0,3,297	0/0:19,0:19:9.03:0,9,105	1/1:8,0:12:5.68:28,6,0	0/0:22,0:22:6.02:0,6,83	0/0:6,0:6:3:0,3,26	0/0:21,0:22:0.90:0,1,158	0/0:19,0:18:12.04:0,12,174	0/1:15,1:16:46.38:46,0,155	0/1:14,1:15:23.29:23,0,78	0/0:13,0:13:15.05:0,15,216	0/1:24,1:25:3.95:4,0,270	0/0:25,4:29:0.86:0,1,388	0/0:10,0:10:8.51:0,9,87	0/0:8,0:8:8.06:0,8,89	0/0:42,0:40:26.38:0,26,237	0/0:8,0:8:3.01:0,3,42	0/0:9,0:9:3.01:0,3,44	0/0:32,0:32:24.06:0,24,326	0/0:12,0:11:6.02:0,6,88	0/0:18,0:16:13.26:0,13,127	0/0:14,0:13:12:0,12,123	./.
chr10	106741481	.	C	CTG	5104.81	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.784;DP=578;FS=0.411;HRun=0;HaplotypeScore=72.2717;InbreedingCoeff=0.9962;MQ=78.02;MQ0=0;MQRankSum=-2.286;QD=42.54;ReadPosRankSum=-2.451;VQSLOD=5.7830;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,1659	1/1:1,9:10:27.09:489,27,0	0/0:8,0:8:17.03:0,17,220	0/0:20,0:20:53.97:0,54,638	0/0:12,0:12:36.08:0,36,492	0/0:15,0:15:42.13:0,42,583	0/0:23,0:23:69.22:0,69,970	1/1:2,24:26:69.14:1155,69,0	0/0:20,0:20:56.91:0,57,765	0/0:27,0:27:78.23:0,78,1068	0/0:9,0:9:21.07:0,21,301	0/0:26,0:26:66.21:0,66,927	0/0:21,0:21:60.17:0,60,838	0/0:20,0:20:54.17:0,54,755	0/0:19,0:19:51.17:0,51,730	0/0:20,0:20:60.19:0,60,841	0/0:31,0:31:81.27:0,81,1159	0/0:25,0:25:75.22:0,75,1050	1/1:1,12:13:36.12:660,36,0	1/1:1,11:12:30.10:549,30,0	1/1:3,40:44:96.33:1758,96,0	0/0:10,0:10:29.67:0,30,378	0/0:9,0:9:27.09:0,27,387	0/0:36,0:36:99:0,102,1418	0/0:17,0:17:45.15:0,45,643	0/0:28,0:28:84.27:0,84,1169	1/1:2,11:15:26.61:494,27,0	0/0:21,0:21:63.21:0,63,901
chr10	106742250	.	T	TG	2769.24	PASS	AC=12;AF=0.240;AN=50;BaseQRankSum=-9.243;DP=271;FS=5.938;HRun=3;HaplotypeScore=31.5651;InbreedingCoeff=0.8600;MQ=81.37;MQ0=0;MQRankSum=-1.713;QD=33.77;ReadPosRankSum=0.185;VQSLOD=3.0099;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:24.07:0,24,288	./.	0/0:10,0:9:21.06:0,21,252	0/0:7,0:6:11.88:0,12,103	0/0:2,0:2:6.02:0,6,72	0/0:4,0:4:12.04:0,12,144	0/0:25,0:25:75.21:0,75,888	1/1:1,7:8:21.07:290,21,0	1/1:0,3:3:9.03:126,9,0	0/0:15,0:15:45.12:0,45,522	0/0:4,0:4:9.03:0,9,108	0/0:9,0:9:27.08:0,27,324	0/0:4,0:4:9.03:0,9,108	0/0:10,0:10:30.09:0,30,360	0/0:10,0:10:24.07:0,24,288	0/0:5,0:5:15.05:0,15,180	0/0:12,0:12:36.11:0,36,432	0/0:12,0:12:33.10:0,33,395	1/1:2,6:8:18.06:252,18,0	1/1:0,1:1:3.01:42,3,0	1/1:4,54:58:99:2100,151,0	./.	0/0:4,0:4:9.03:0,9,103	0/0:25,0:25:66.17:0,66,777	0/0:11,0:11:33.10:0,33,396	0/0:11,0:11:24.07:0,24,287	1/1:0,4:4:9.03:126,9,0	./.
chr10	106745026	.	G	GA	9266.43	PASS	AB=0.800;AC=55;AF=0.982;AN=56;BaseQRankSum=-1.770;DP=248;FS=5.270;HRun=2;HaplotypeScore=92.3584;InbreedingCoeff=-0.0366;MQ=72.46;MQ0=0;MQRankSum=-2.839;QD=37.36;ReadPosRankSum=1.106;VQSLOD=5.2044;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:33.11:492,33,0	1/1:1,1:2:6.02:79,6,0	1/1:4,5:9:10.53:184,11,0	0/1:6,2:7:13.40:99,0,13	1/1:1,7:8:15.01:187,15,0	1/1:0,5:5:15.05:215,15,0	1/1:1,9:10:30.10:448,30,0	1/1:2,21:23:66.22:983,66,0	1/1:1,3:4:12.02:158,12,0	1/1:0,8:8:24.06:320,24,0	1/1:1,6:7:21.03:276,21,0	1/1:1,16:17:48.16:697,48,0	1/1:2,7:9:21.03:289,21,0	1/1:1,7:8:24.07:329,24,0	1/1:2,16:18:54.18:805,54,0	1/1:0,13:13:36.12:537,36,0	1/1:1,11:12:27.07:381,27,0	1/1:0,4:4:9.03:133,9,0	1/1:0,9:9:27.09:404,27,0	1/1:0,3:3:9.03:134,9,0	1/1:1,11:12:24.08:358,24,0	1/1:0,12:12:30.10:448,30,0	1/1:1,5:6:15.05:222,15,0	1/1:1,5:6:12.03:159,12,0	1/1:0,6:6:18.06:269,18,0	1/1:0,9:9:27.09:392,27,0	1/1:0,2:2:6.02:90,6,0	1/1:1,4:5:12.04:179,12,0
chr10	106748610	.	G	GGA	361.95	PASS	AB=0.917;AC=8;AF=0.148;AN=54;BaseQRankSum=2.280;DP=228;FS=11.707;HRun=0;HaplotypeScore=36.6496;InbreedingCoeff=0.2739;MQ=77.00;MQ0=21;MQRankSum=-2.863;QD=4.58;ReadPosRankSum=-0.894;VQSLOD=0.4059;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:20.85:0,21,248	1/1:0,2:2:6.02:94,6,0	0/0:38,0:9:0.49:0,0,9	0/1:50,0:18:27.70:28,0,45	0/0:9,0:7:17.82:0,18,170	0/0:3,0:3:8.86:0,9,85	0/0:9,0:9:20.88:0,21,216	1/1:11,2:9:12.01:153,12,0	0/0:3,0:4:8.69:0,9,63	0/0:6,0:6:8.98:0,9,90	0/0:3,0:3:6:0,6,60	0/0:3,0:3:6.02:0,6,71	0/0:5,0:4:9.01:0,9,95	./.	0/0:4,0:3:3.01:0,3,36	0/0:4,0:4:3.01:0,3,36	0/0:7,0:6:15.02:0,15,164	0/0:2,0:2:3.01:0,3,35	0/0:6,0:4:2.96:0,3,35	0/0:4,0:2:2.98:0,3,21	0/1:8,2:10:23.49:129,0,23	0/0:8,0:8:18.04:0,18,201	0/0:4,0:4:3.01:0,3,36	0/0:3,0:3:6.02:0,6,71	0/0:3,0:2:6:0,6,52	0/0:4,0:3:6.01:0,6,62	1/1:1,2:3:6.02:87,6,0	0/0:2,0:1:3.01:0,3,36
chr10	106748974	.	CTT	C	860.26	PASS	AB=0.813;AC=12;AF=0.214;AN=56;BaseQRankSum=6.650;DP=594;FS=0.000;HRun=16;HaplotypeScore=78.6771;InbreedingCoeff=0.7338;MQ=71.50;MQ0=0;MQRankSum=0.777;QD=6.62;ReadPosRankSum=4.571;VQSLOD=-0.0082;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,1:45:84.28:0,84,1013	1/1:2,7:10:23.65:187,24,0	0/0:22,0:16:20.70:0,21,188	0/1:13,2:12:12.07:12,0,21	0/0:15,0:21:44.29:0,44,456	0/0:20,0:22:37.79:0,38,389	0/0:15,0:21:34.14:0,34,310	1/1:13,8:22:14.65:163,15,0	0/0:18,0:21:51.69:0,52,557	0/0:14,0:14:34.88:0,35,394	0/0:13,0:17:40.73:0,41,371	0/0:17,0:17:29.66:0,30,554	0/0:20,0:20:14.96:0,15,409	0/0:15,0:15:38.96:0,39,375	0/0:25,2:29:4.54:0,5,569	0/0:16,1:22:21.72:0,22,435	0/0:17,0:19:53.34:0,53,556	0/0:19,0:18:39.04:0,39,482	0/1:18,5:28:39.07:109,0,39	1/1:4,8:14:18.68:121,19,0	1/1:2,8:17:20.30:265,20,0	0/0:22,0:23:55.51:0,56,537	0/0:17,0:21:32.46:0,32,385	0/0:29,0:31:73.87:0,74,823	0/0:13,0:18:43.76:0,44,435	0/0:30,1:35:48.55:0,49,673	1/1:10,11:23:5.98:175,6,0	0/0:11,0:11:24.06:0,24,296
chr10	106749161	.	CCTGTCTGT	C	2955.10	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.018;DP=634;FS=0.500;HRun=0;HaplotypeScore=163.5649;InbreedingCoeff=0.9101;MQ=70.42;MQ0=11;MQRankSum=1.587;QD=20.10;ReadPosRankSum=-2.540;VQSLOD=2.5206;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:42.12:0,42,956	1/1:1,0:8:2.96:7,3,0	0/0:24,0:19:20.55:0,21,440	0/0:28,0:25:22.86:0,23,341	0/0:22,0:21:48.15:0,48,1198	0/0:23,0:23:30.10:0,30,858	0/0:19,0:19:30.09:0,30,474	1/1:18,26:43:78.21:1190,78,0	0/0:7,0:19:9.03:0,9,332	0/0:23,0:20:42.14:0,42,1214	0/0:20,0:20:39.13:0,39,1185	0/0:26,0:26:66.23:0,66,1921	0/0:25,0:25:54.10:0,54,1431	0/0:21,0:21:54.18:0,54,1504	0/0:29,0:29:75.21:0,75,2147	0/0:25,0:25:57.18:0,57,1542	0/0:30,0:30:60.17:0,60,1469	0/0:16,0:15:33.09:0,33,664	1/1:13,16:29:45.05:707,45,0	1/1:4,13:16:2.61:35,3,0	1/1:28,0:28:45.59:722,46,0	0/0:16,0:16:32.78:0,33,1002	0/0:14,0:14:24.06:0,24,645	0/0:23,0:23:51.15:0,51,1345	0/0:19,0:19:39.13:0,39,1184	0/0:26,0:25:69.18:0,69,1585	1/1:4,17:21:18.06:463,18,0	0/0:9,0:9:21.05:0,21,462
chr10	106749563	.	GAAA	G	1879.08	PASS	AB=0.571;AC=9;AF=0.167;AN=54;BaseQRankSum=2.979;DP=443;FS=15.919;HRun=12;HaplotypeScore=66.2749;InbreedingCoeff=0.7658;MQ=56.52;MQ0=12;MQRankSum=2.485;QD=22.11;ReadPosRankSum=-0.987;VQSLOD=0.4802;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:66.18:0,66,1128	1/1:0,9:9:18.04:227,18,0	0/0:50,0:15:10.36:0,10,113	0/0:39,0:9:11.86:0,12,127	0/0:20,0:22:60.11:0,60,959	0/0:17,0:17:33.10:0,33,606	0/0:6,0:6:14.41:0,14,245	1/1:7,28:33:51.25:811,51,0	0/0:0,0:1:2.98:0,3,22	0/0:12,0:13:39.10:0,39,692	0/0:29,0:29:81.24:0,81,1442	0/0:4,0:9:14.92:0,15,112	0/0:7,0:9:17.90:0,18,272	0/0:5,0:7:9.03:0,9,161	0/0:14,0:14:36.11:0,36,621	0/0:6,0:6:12.03:0,12,198	0/0:17,0:23:48.16:0,48,852	0/0:23,0:24:45.10:0,45,764	1/1:5,15:18:45:566,45,0	0/1:2,6:8:9.31:133,0,9	./.	0/0:7,0:7:6.02:0,6,118	0/0:4,0:4:11.91:0,12,189	0/0:8,0:8:24.08:0,24,465	0/0:14,0:13:30.08:0,30,492	0/0:15,0:15:24.94:0,25,359	1/1:2,10:12:24.05:303,24,0	0/0:10,0:10:21.04:0,21,351
chr10	106751358	.	G	GA	1103.47	PASS	AB=0.843;AC=18;AF=0.321;AN=56;BaseQRankSum=-2.647;DP=431;FS=0.000;HRun=13;HaplotypeScore=60.2294;InbreedingCoeff=0.1161;MQ=62.32;MQ0=12;MQRankSum=-0.682;QD=5.04;ReadPosRankSum=-1.479;VQSLOD=1.2987;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,1:21:3.19:0,3,150	1/1:2,6:10:3.38:165,3,0	0/1:14,0:7:2.85:3,0,41	0/1:13,1:10:17.39:19,0,17	0/0:22,1:22:10.77:0,11,218	0/1:8,1:8:13.02:13,0,66	0/1:10,2:10:14.58:22,0,15	1/1:12,13:25:4.45:313,4,0	1/1:4,4:8:6.01:56,6,0	0/1:10,1:10:1.06:1,0,137	0/1:17,0:14:10.38:10,0,83	0/0:12,0:12:17.69:0,18,119	0/0:7,0:7:11.82:0,12,79	0/0:13,1:13:14.78:0,15,99	0/0:16,0:16:7.46:0,7,166	0/0:9,0:7:14.85:0,15,101	0/0:25,2:28:29.73:0,30,333	0/0:17,2:21:14.78:0,15,224	0/1:9,10:18:1.16:168,0,1	0/1:9,9:19:22.92:208,0,23	1/1:6,10:16:6.28:189,6,0	0/0:5,0:5:5.87:0,6,39	0/0:11,0:10:14.77:0,15,102	0/0:9,1:11:10.87:0,11,67	0/1:19,2:21:14.18:14,0,201	0/0:19,1:20:7.11:0,7,184	0/1:9,9:19:23.50:80,0,23	0/0:9,0:9:20.54:0,21,134
chr10	106752544	.	CTG	C	234.20	PASS	AB=0.867;AC=7;AF=0.125;AN=56;BaseQRankSum=6.530;DP=633;FS=0.000;HRun=0;HaplotypeScore=68.5852;InbreedingCoeff=-0.1351;MQ=55.13;MQ0=16;MQRankSum=-6.845;QD=1.50;ReadPosRankSum=-0.782;VQSLOD=1.4612;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,1:39:58.31:0,58,1742	0/1:11,1:11:17.05:17,0,323	0/1:16,7:10:20.11:20,0,336	0/1:27,5:16:20.78:21,0,644	0/0:11,0:11:33.10:0,33,586	0/0:20,1:21:13.17:0,13,923	0/0:25,0:25:72.23:0,72,1309	0/1:31,8:31:99:219,0,1129	0/0:31,0:31:90.31:0,90,1674	0/0:15,0:15:45.15:0,45,843	0/0:12,0:12:33.11:0,33,617	0/0:22,0:22:66.23:0,66,1235	0/0:10,0:10:27.08:0,27,473	0/0:16,0:16:45.15:0,45,826	0/0:27,0:26:75.24:0,75,1342	0/0:11,0:11:33.11:0,33,618	0/0:33,0:33:99:0,99,1842	0/0:34,0:34:96.28:0,96,1703	0/1:23,2:24:15.58:16,0,1096	0/1:15,1:16:1.95:2,0,687	0/0:54,0:53:99:0,154,2820	0/0:13,0:13:36.12:0,36,673	0/1:7,2:9:64.08:64,0,282	0/0:35,0:35:98.68:0,99,1763	0/0:18,0:18:51.16:0,51,909	0/0:21,1:21:19.07:0,19,1004	0/0:22,0:22:63.22:0,63,1179	0/0:4,0:4:12.04:0,12,224
chr10	106753845	.	CGTGT	C	5563.40	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.781;DP=1137;FS=7.054;HRun=0;HaplotypeScore=194.1996;InbreedingCoeff=0.9836;MQ=55.92;MQ0=15;MQRankSum=1.186;QD=21.40;ReadPosRankSum=-0.655;VQSLOD=3.6002;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,1:54:81.90:0,82,2865	1/1:3,6:9:9.03:149,9,0	0/0:63,0:27:33.04:0,33,489	0/0:73,0:35:41.09:0,41,1129	0/0:30,1:32:19.47:0,19,1388	0/0:20,0:22:47.90:0,48,1043	0/0:37,0:43:79.87:0,80,1451	1/1:21,24:46:19.04:1007,19,0	0/0:46,1:47:52.57:0,53,2214	0/0:31,0:33:59.67:0,60,1290	0/0:13,0:14:26.81:0,27,553	0/0:38,0:41:95.51:0,96,1825	0/0:35,0:40:91.94:0,92,1846	0/0:39,0:42:79.59:0,80,1636	0/0:47,0:50:99:0,111,2407	0/0:54,0:59:99:0,131,2825	0/0:41,0:41:93.14:0,93,2052	0/0:18,0:20:42.89:0,43,805	1/1:21,7:25:18.06:298,18,0	1/1:9,15:25:33.11:547,33,0	1/1:40,69:110:99:2512,132,0	0/0:32,0:35:89.46:0,89,1839	0/0:25,0:25:66.12:0,66,1465	0/0:60,0:63:99:0,165,3516	0/0:23,0:25:53.89:0,54,1115	0/0:35,0:36:90.01:0,90,1986	1/1:15,25:41:66.21:1050,66,0	0/0:14,0:14:42.14:0,42,944
chr10	106758140	.	CCTT	C	3903.58	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.838;DP=510;FS=0.931;HRun=0;HaplotypeScore=77.5326;InbreedingCoeff=0.9838;MQ=86.70;MQ0=0;MQRankSum=-2.238;QD=39.83;ReadPosRankSum=1.494;VQSLOD=4.7410;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.33:0,96,2174	1/1:0,3:3:9.03:150,9,0	0/0:20,0:20:50.64:0,51,938	0/0:21,0:19:47.97:0,48,875	0/0:8,0:8:24.08:0,24,544	0/0:17,0:17:48.16:0,48,1088	0/0:26,0:26:78.27:0,78,1766	1/1:5,15:20:45.10:670,45,0	0/0:15,0:15:45.15:0,45,1020	0/0:19,0:19:54.18:0,54,1164	0/0:9,0:9:27.09:0,27,599	0/0:23,0:23:69.24:0,69,1562	0/0:10,0:10:24.08:0,24,543	0/0:21,0:21:60.21:0,60,1348	0/0:18,0:18:54.19:0,54,1224	0/0:10,0:10:30.10:0,30,680	0/0:28,0:28:78.27:0,78,1725	0/0:40,0:40:99:0,117,2623	1/1:4,8:12:30.06:469,30,0	1/1:3,5:8:16.56:297,17,0	1/1:2,42:44:99:1819,111,0	0/0:13,0:13:39.13:0,39,839	0/0:10,0:10:27.09:0,27,611	0/0:24,0:24:63.22:0,63,1409	0/0:14,0:14:42.14:0,42,928	0/0:24,0:24:66.23:0,66,1472	1/1:1,10:11:30.10:500,30,0	0/0:8,0:8:24.08:0,24,544
chr10	106759223	.	CCGG	C	785.99	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=6.031;DP=354;FS=1.829;HRun=0;HaplotypeScore=56.9455;InbreedingCoeff=0.7682;MQ=73.97;MQ0=1;MQRankSum=-1.804;QD=12.89;ReadPosRankSum=0.365;VQSLOD=3.1543;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.27:0,84,1790	./.	0/0:8,0:7:14.70:0,15,168	0/1:21,0:14:13.89:14,0,293	0/0:10,0:10:27.09:0,27,520	0/0:12,0:12:36.07:0,36,726	0/0:26,0:26:72.18:0,72,1563	1/1:2,3:5:6.02:103,6,0	0/0:11,0:11:33.11:0,33,706	0/0:8,0:8:24.07:0,24,443	0/0:4,0:4:11.40:0,11,184	0/0:10,0:10:30.07:0,30,573	0/0:11,0:11:33.09:0,33,688	0/0:18,0:18:48.64:0,49,1102	0/0:10,0:10:27.08:0,27,574	0/0:15,0:15:45.10:0,45,832	0/0:35,0:35:99:0,102,2220	0/0:28,0:28:84.26:0,84,1808	1/1:2,3:5:9.02:153,9,0	1/1:1,7:8:6.02:91,6,0	1/1:0,10:10:11.58:206,12,0	0/0:14,0:14:33.05:0,33,534	0/0:6,0:6:18.02:0,18,255	0/0:16,0:16:45.02:0,45,923	0/0:8,0:8:21.05:0,21,387	0/0:12,0:12:33.11:0,33,712	1/1:0,11:10:24.08:378,24,0	0/0:1,0:1:3.01:0,3,70
chr10	106759489	.	CG	C	1314.59	PASS	AB=0.891;AC=25;AF=0.500;AN=50;BaseQRankSum=-0.847;DP=303;FS=21.775;HRun=11;HaplotypeScore=42.5785;InbreedingCoeff=0.5057;MQ=94.01;MQ0=3;MQRankSum=-0.685;QD=6.96;ReadPosRankSum=3.769;VQSLOD=0.2986;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,16:25:32.95:271,33,0	0/0:1,1:2:5.66:0,6,33	0/1:31,0:19:7.25:7,0,104	0/0:33,2:22:8.08:0,8,130	./.	0/0:10,0:10:15.32:0,15,127	0/0:16,0:16:8.67:0,9,267	1/1:11,1:12:4.37:28,4,0	0/0:2,0:2:6.02:0,6,64	./.	./.	0/1:11,1:11:6.65:7,0,124	0/0:7,0:7:6.48:0,6,62	1/1:4,0:4:5.84:39,6,0	1/1:3,7:11:17.02:129,17,0	0/0:7,0:7:15.04:0,15,160	1/1:4,28:32:43.23:473,43,0	1/1:6,14:22:4.56:158,5,0	1/1:5,4:9:14.43:106,14,0	1/1:3,2:5:5.99:49,6,0	1/1:2,3:5:5.99:49,6,0	1/1:3,0:3:2.99:25,3,0	0/0:6,0:6:2.96:0,3,19	0/1:2,1:3:18.63:19,0,26	0/0:5,0:5:5.98:0,6,55	0/0:7,0:7:2.88:0,3,31	1/1:3,10:14:17.01:129,17,0	0/0:4,0:4:5.96:0,6,45
chr10	106759676	.	T	TTTTTA	2289.24	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=2.323;DP=423;FS=1.638;HRun=0;HaplotypeScore=103.0331;InbreedingCoeff=0.9325;MQ=76.13;MQ0=3;MQRankSum=-4.820;QD=30.94;ReadPosRankSum=-2.910;VQSLOD=2.9438;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:80.14:0,80,1099	1/1:6,0:8:23.89:260,24,0	0/0:29,0:14:11.02:0,11,231	0/0:28,0:12:10.11:0,10,158	0/0:18,0:19:47.67:0,48,577	0/0:13,0:13:39.08:0,39,569	0/0:20,0:20:53.66:0,54,729	1/1:17,0:17:45.02:518,45,0	0/0:10,0:10:23.99:0,24,272	0/0:13,0:13:29.91:0,30,419	0/0:13,0:13:36.01:0,36,493	0/0:18,0:18:47.39:0,47,540	0/0:6,0:6:11.66:0,12,182	0/0:7,0:7:21.02:0,21,282	0/0:18,0:18:54.10:0,54,777	0/0:9,0:9:23.15:0,23,312	0/0:25,0:25:49.78:0,50,965	0/0:30,0:30:80.88:0,81,1148	1/1:10,1:12:6.03:403,6,0	1/1:6,0:7:21.01:268,21,0	1/1:3,2:5:14.99:216,15,0	0/0:4,0:4:8.87:0,9,91	0/0:15,0:15:41.85:0,42,534	0/0:9,0:9:26.95:0,27,320	0/0:5,0:5:15.01:0,15,204	0/0:20,0:20:50.50:0,51,562	1/1:16,4:22:53.83:805,54,0	0/0:8,0:8:20.74:0,21,286
chr10	106759691	.	CT	C	964	PASS	AB=0.802;AC=12;AF=0.214;AN=56;BaseQRankSum=8.634;DP=441;FS=2.562;HRun=10;HaplotypeScore=69.0430;InbreedingCoeff=0.5232;MQ=75.64;MQ0=0;MQRankSum=-0.737;QD=8.46;ReadPosRankSum=2.396;VQSLOD=2.3151;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,2:33:23.12:0,23,666	1/1:3,4:7:11.78:103,12,0	0/1:21,0:12:15.52:16,0,50	0/1:20,0:12:12.05:12,0,49	0/0:20,0:20:45.16:0,45,460	0/0:17,0:18:33.39:0,33,347	0/0:18,1:19:19.04:0,19,422	1/1:3,12:15:5.70:279,6,0	0/0:13,0:13:32.99:0,33,329	0/0:11,1:12:29.98:0,30,298	0/0:16,0:17:38.91:0,39,391	0/0:19,1:20:25.01:0,25,465	0/0:8,0:8:24.02:0,24,246	0/0:6,0:6:15.01:0,15,148	0/0:19,1:20:19.04:0,19,423	0/0:17,0:17:42.10:0,42,456	0/0:27,0:28:66.03:0,66,654	0/0:28,0:29:62.88:0,63,618	1/1:3,9:12:26.98:234,27,0	0/1:1,7:8:12.19:135,0,12	1/1:2,4:6:11.98:104,12,0	0/0:5,0:5:9.02:0,9,100	0/0:14,0:14:29.74:0,30,303	0/0:11,1:12:4.01:0,4,265	0/0:10,0:10:21.94:0,22,234	0/0:19,1:20:19.04:0,19,420	0/1:13,12:23:8.04:246,0,8	0/0:6,0:6:15.01:0,15,149
chr10	106760115	.	G	GC	4929.78	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.909;DP=549;FS=1.263;HRun=4;HaplotypeScore=53.8295;InbreedingCoeff=0.9967;MQ=87.56;MQ0=0;MQRankSum=-1.921;QD=34.23;ReadPosRankSum=-0.014;VQSLOD=5.1623;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.24:0,84,952	1/1:0,8:8:24.05:308,24,0	0/0:23,0:23:50.93:0,51,633	0/0:17,0:17:42.09:0,42,454	0/0:12,0:12:27.08:0,27,305	0/0:11,0:11:30.07:0,30,328	0/0:24,0:24:69.15:0,69,752	1/1:3,20:23:57.16:741,57,0	0/0:24,0:24:63.18:0,63,714	0/0:13,0:13:36.09:0,36,395	0/0:13,0:13:33.08:0,33,364	0/0:24,0:24:63.18:0,63,714	0/0:13,0:13:33.09:0,33,374	0/0:18,0:18:48.14:0,48,544	0/0:20,0:20:51.14:0,51,578	0/0:16,0:16:45.13:0,45,510	0/0:34,0:34:96.27:0,96,1089	0/0:16,0:16:48.14:0,48,544	1/1:2,18:20:54.14:690,54,0	1/1:1,9:10:27.09:367,27,0	1/1:4,63:67:99:2209,163,0	0/0:9,0:9:24.07:0,24,272	0/0:15,0:15:33.08:0,33,364	0/0:32,0:32:96.27:0,96,1088	0/0:12,0:12:33.09:0,33,374	0/0:24,0:24:60.12:0,60,646	1/1:0,16:16:45.15:615,45,0	0/0:6,0:6:17.98:0,18,188
chr10	106760791	.	C	CGT	3617.34	PASS	AB=0.765;AC=12;AF=0.214;AN=56;BaseQRankSum=-9.793;DP=567;FS=1.478;HRun=0;HaplotypeScore=71.2177;InbreedingCoeff=0.8270;MQ=77.76;MQ0=1;MQRankSum=1.085;QD=27.61;ReadPosRankSum=-1.254;VQSLOD=4.4591;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:86.96:0,87,981	1/1:0,6:6:18.06:299,18,0	0/0:25,0:24:32.93:0,33,328	0/0:20,0:19:6.58:0,7,179	0/0:10,0:10:30.06:0,30,350	0/0:14,0:14:42.08:0,42,487	0/0:25,0:25:69.11:0,69,785	1/1:6,18:25:54.15:819,54,0	0/0:18,0:18:51.15:0,51,630	0/0:18,0:18:45.01:0,45,545	0/1:13,0:13:8.39:8,0,380	0/0:24,0:24:63.16:0,63,755	0/0:16,0:16:48.14:0,48,592	0/0:15,0:15:39.07:0,39,461	0/0:15,0:15:39.10:0,39,477	0/0:19,0:19:54.15:0,54,654	0/0:45,0:46:99:0,111,1334	0/0:34,0:34:93.21:0,93,1103	1/1:7,15:22:45.12:683,45,0	0/1:2,16:18:1.70:512,0,2	1/1:6,28:33:54.18:897,54,0	0/0:11,0:11:30.08:0,30,365	0/0:11,0:11:27.07:0,27,327	0/0:25,0:25:69.03:0,69,823	0/0:22,0:22:66.20:0,66,820	0/0:20,0:20:54.16:0,54,669	1/1:1,12:13:24.08:398,24,0	0/0:17,0:17:48.15:0,48,605
chr10	106762290	.	G	GC	2477.60	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=5.637;DP=573;FS=4.162;HRun=5;HaplotypeScore=77.4562;InbreedingCoeff=0.9077;MQ=77.52;MQ0=1;MQRankSum=-1.083;QD=19.06;ReadPosRankSum=-0.826;VQSLOD=3.1196;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.09:0,75,776	1/1:1,6:7:9.03:114,9,0	0/0:22,0:20:21.54:0,22,354	0/1:23,0:21:4.64:5,0,145	0/0:17,0:17:29.74:0,30,280	0/0:22,0:22:51.07:0,51,527	0/0:22,0:22:66.13:0,66,693	1/1:15,5:22:44.76:399,45,0	0/0:26,0:26:60.10:0,60,631	0/0:17,0:17:45.03:0,45,451	0/0:13,0:13:30.04:0,30,306	0/0:21,0:21:45.03:0,45,461	0/0:18,0:18:45.09:0,45,474	0/0:33,0:33:80.13:0,80,811	0/0:23,0:23:45.08:0,45,468	0/0:24,0:24:66.15:0,66,700	0/0:37,0:37:93.19:0,93,981	0/0:27,0:27:75.19:0,75,806	1/1:5,17:22:50.99:604,51,0	1/1:3,9:11:18.06:234,18,0	1/1:12,19:31:69.18:880,69,0	0/0:10,0:10:24.05:0,24,251	0/0:9,0:9:18.04:0,18,193	0/0:32,0:32:77.97:0,78,798	0/0:15,0:15:33.08:0,33,352	0/0:19,0:18:47.86:0,48,477	1/1:2,11:13:33.11:427,33,0	0/0:9,0:9:24.03:0,24,246
chr10	106762301	.	AGG	A	1602.33	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.619;DP=536;FS=8.506;HRun=9;HaplotypeScore=81.9224;InbreedingCoeff=0.9593;MQ=77.89;MQ0=1;MQRankSum=-0.258;QD=17.61;ReadPosRankSum=-0.054;VQSLOD=1.6447;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.19:0,66,1015	1/1:3,1:4:6:69,6,0	0/0:28,0:24:35.49:0,35,469	0/0:24,0:20:16.53:0,17,377	0/0:12,0:12:30.09:0,30,452	0/0:22,0:22:54.18:0,54,868	0/0:23,0:23:66.23:0,66,1079	1/1:9,2:11:9.24:169,9,0	0/0:23,0:23:57.18:0,57,885	0/0:14,0:14:27.08:0,27,419	0/0:13,0:13:27.09:0,27,443	0/0:20,0:21:59.67:0,60,899	0/0:17,0:17:48.16:0,48,757	0/0:29,0:29:66.23:0,66,1080	0/0:15,0:16:48.16:0,48,765	0/0:24,0:26:59.17:0,59,893	0/0:31,0:32:80.73:0,81,1212	0/0:25,0:27:65.17:0,65,942	1/1:9,10:19:36.10:413,36,0	1/1:5,5:9:24.06:265,24,0	1/1:10,23:33:42.88:500,43,0	0/0:10,0:11:26.47:0,26,366	0/0:8,0:8:15.52:0,16,246	0/0:31,0:32:78.26:0,78,1255	0/0:15,0:16:30.10:0,30,480	0/0:13,0:14:23.57:0,24,353	1/1:6,8:14:33.04:367,33,0	0/0:10,0:10:24.08:0,24,394
chr10	106765208	.	AC	A	2678.65	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.058;DP=613;FS=7.573;HRun=7;HaplotypeScore=62.9682;InbreedingCoeff=0.9969;MQ=89.07;MQ0=0;MQRankSum=-3.833;QD=21.09;ReadPosRankSum=-0.144;VQSLOD=2.8412;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,1:38:59.68:0,60,1064	1/1:2,7:9:18.04:184,18,0	0/0:25,0:25:62.25:0,62,696	0/0:30,0:29:56.29:0,56,705	0/0:24,0:24:66.20:0,66,812	0/0:23,0:23:63.20:0,63,791	0/0:29,0:29:81.26:0,81,1019	1/1:8,14:22:39.08:398,39,0	0/0:14,0:14:39.12:0,39,491	0/0:19,0:19:48.13:0,48,577	0/0:23,0:23:60.18:0,60,741	0/0:22,0:22:63.20:0,63,791	0/0:17,0:17:48.11:0,48,564	0/0:19,0:19:51.13:0,51,604	0/0:20,1:21:29.56:0,30,658	0/0:25,0:25:72.23:0,72,906	0/0:36,0:36:99:0,102,1250	0/0:22,0:22:60.18:0,60,741	1/1:3,24:27:66.12:667,66,0	1/1:4,14:18:36.07:366,36,0	1/1:6,30:36:81.18:826,81,0	0/0:18,0:18:45.14:0,45,564	0/0:11,0:11:24.08:0,24,301	0/0:26,0:26:66.17:0,66,811	0/0:20,0:20:60.17:0,60,729	0/0:17,0:17:45.13:0,45,543	1/1:2,13:15:42.09:427,42,0	0/0:7,0:7:21.07:0,21,264
chr10	106769741	.	GA	G	568.26	PASS	AB=0.781;AC=12;AF=0.214;AN=56;BaseQRankSum=4.018;DP=230;FS=1.612;HRun=10;HaplotypeScore=30.9696;InbreedingCoeff=0.6188;MQ=95.44;MQ0=5;MQRankSum=-0.310;QD=9.80;ReadPosRankSum=-0.675;VQSLOD=1.0598;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.08:0,54,567	1/1:0,1:1:3:26,3,0	0/0:31,1:21:8.71:0,9,209	0/1:21,0:12:2.24:2,0,47	0/0:3,0:3:9.02:0,9,100	0/0:3,0:3:9.02:0,9,100	0/0:14,1:15:16.03:0,16,382	1/1:0,5:5:15:130,15,0	0/0:4,0:4:12.02:0,12,125	0/0:7,0:7:14.98:0,15,144	0/0:2,0:2:6.02:0,6,66	0/0:8,0:9:21.03:0,21,212	0/0:4,0:4:9.02:0,9,100	0/0:5,0:5:15.04:0,15,166	0/0:2,0:2:6:0,6,59	0/0:3,0:3:9.02:0,9,99	0/0:11,0:11:26.86:0,27,278	0/0:14,0:14:38.94:0,39,387	0/1:2,7:9:6.50:157,0,6	1/1:1,2:3:3:26,3,0	1/1:2,13:15:32.95:279,33,0	0/0:5,0:5:12.03:0,12,133	0/0:2,0:2:6.02:0,6,66	0/0:16,0:16:45.07:0,45,475	0/0:3,0:3:9.02:0,9,100	0/0:6,0:6:18.05:0,18,199	1/1:0,4:4:12:104,12,0	0/0:7,0:7:21.06:0,21,229
chr10	106770063	.	AGTGT	A	106.81	PASS	AB=0.969;AC=10;AF=0.238;AN=42;BaseQRankSum=1.279;DP=554;FS=5.313;HRun=0;HaplotypeScore=90.5746;InbreedingCoeff=0.2962;MQ=71.35;MQ0=13;MQRankSum=1.407;QD=0.60;ReadPosRankSum=1.664;VQSLOD=1.3300;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:12.01:0,12,171	./.	./.	0/0:43,0:22:0:0,0,0	1/1:6,0:6:3.01:44,3,0	./.	0/0:33,0:33:9.97:0,10,161	./.	0/0:22,0:22:20.91:0,21,252	0/0:20,0:19:3:0,3,27	0/0:3,0:3:6.01:0,6,75	0/1:20,0:19:9.18:9,0,202	0/0:13,0:11:5.96:0,6,54	0/0:22,0:22:14.93:0,15,202	0/0:10,0:10:11.96:0,12,225	0/0:14,0:14:10.65:0,11,176	0/1:29,0:30:7.34:7,0,294	0/1:18,0:18:0.18:0,0,349	1/1:18,2:20:6.01:71,6,0	./.	1/1:59,16:74:5.63:64,6,0	0/0:9,0:9:6.01:0,6,95	./.	0/0:44,0:51:65.81:0,66,946	0/0:7,0:7:12.04:0,12,270	0/0:21,0:21:32.90:0,33,453	./.	0/1:9,1:9:30.49:30,0,188
chr10	106772812	.	T	TGCGC	4069.34	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-7.608;DP=618;FS=4.012;HRun=0;HaplotypeScore=101.6102;InbreedingCoeff=0.8885;MQ=70.60;MQ0=1;MQRankSum=-0.905;QD=35.08;ReadPosRankSum=-0.220;VQSLOD=3.2267;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:42:99:0,102,1695	1/1:2,4:8:3.01:75,3,0	0/0:9,0:9:2.37:0,2,8	0/0:7,0:7:3:0,3,29	0/0:11,0:11:24.08:0,24,412	0/0:20,0:20:60.16:0,60,950	0/0:27,0:27:66.17:0,66,1021	1/1:14,4:19:12.03:250,12,0	0/0:25,0:25:57.14:0,57,906	0/0:20,0:20:57.16:0,57,917	0/0:12,0:12:30.10:0,30,515	0/0:41,0:41:99:0,99,1669	0/0:26,0:26:66.18:0,66,1051	0/0:30,0:30:75.18:0,75,1202	0/0:19,0:19:48.16:0,48,824	0/0:30,0:30:75.21:0,75,1230	0/0:40,0:39:99:0,99,1683	0/0:24,0:24:66.23:0,66,1123	1/1:9,15:25:47.84:1055,48,0	1/1:4,7:11:20.62:524,21,0	1/1:13,25:38:60.21:1497,60,0	0/0:16,0:16:30.10:0,30,515	0/0:10,0:10:30.09:0,30,488	0/0:33,0:33:84.27:0,84,1415	0/0:20,0:20:50.83:0,51,750	0/0:20,0:20:51.14:0,51,819	1/1:4,9:14:27.09:668,27,0	0/0:20,0:20:51.12:0,51,825
chr10	106773246	.	CT	C	2975.69	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.869;DP=644;FS=0.000;HRun=2;HaplotypeScore=67.9195;InbreedingCoeff=0.9605;MQ=70.05;MQ0=0;MQRankSum=-2.284;QD=23.07;ReadPosRankSum=-1.238;VQSLOD=2.9842;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,1333	1/1:2,11:13:18:200,18,0	0/0:18,0:17:27.52:0,28,400	0/0:16,0:15:2.62:0,3,293	0/0:18,0:18:45.11:0,45,595	0/0:22,0:22:58.96:0,59,781	0/0:32,0:32:90.21:0,90,1204	1/1:0,24:24:66.08:726,66,0	0/0:26,0:26:76.03:0,76,979	0/0:16,0:16:48.12:0,48,628	0/0:12,0:12:36.11:0,36,513	0/0:34,0:34:89.63:0,90,1231	0/0:23,0:23:59.36:0,59,740	0/0:25,0:25:67.21:0,67,938	0/0:29,0:29:84.25:0,84,1197	0/0:27,0:27:81.20:0,81,1079	0/0:39,0:39:99:0,106,1373	0/0:31,0:31:82.33:0,82,1179	1/1:0,20:20:45.07:531,45,0	1/1:0,14:14:33.11:420,33,0	1/1:4,33:37:56.58:739,57,0	0/0:21,0:21:58.05:0,58,781	0/0:15,0:15:39.08:0,39,534	0/0:28,0:28:72.69:0,73,1042	0/0:18,0:18:50.53:0,51,684	0/0:19,0:19:57.14:0,57,743	1/1:0,21:21:45.08:547,45,0	0/0:10,0:10:21.07:0,21,313
chr10	106773248	.	TG	T	695.82	PASS	AB=0.994;AC=10;AF=0.179;AN=56;BaseQRankSum=12.494;DP=666;FS=0.423;HRun=10;HaplotypeScore=79.7998;InbreedingCoeff=0.5441;MQ=69.75;MQ0=0;MQRankSum=-1.418;QD=4.46;ReadPosRankSum=-0.335;VQSLOD=0.8638;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:87.21:0,87,946	0/1:14,0:14:5.02:51,0,5	0/0:18,0:17:26.94:0,27,249	0/1:16,0:15:15.76:16,0,148	0/0:19,0:19:45.04:0,45,471	0/0:23,1:24:28.30:0,28,523	0/0:28,0:29:78.03:0,78,835	0/1:26,0:26:34:116,0,34	0/0:27,0:28:46.93:0,47,705	0/0:17,0:17:36.10:0,36,398	0/0:12,0:12:33.09:0,33,364	0/0:33,1:35:64:0,64,900	0/0:23,0:23:22.09:0,22,461	0/0:25,2:27:31.07:0,31,571	0/0:30,0:31:78.03:0,78,835	0/0:27,0:27:66.18:0,66,730	0/0:36,1:37:12.15:0,12,801	0/0:30,1:31:55.18:0,55,821	1/1:20,0:20:34.70:154,35,0	1/1:14,0:14:31.62:173,32,0	0/1:43,1:44:99:167,0,109	0/0:20,1:21:28.08:0,28,530	0/0:14,0:14:36.10:0,36,398	0/0:29,1:30:52.11:0,52,767	0/0:19,1:20:25.94:0,26,489	0/0:20,0:20:45.09:0,45,475	1/1:22,0:22:19.40:182,19,0	0/0:10,0:10:21.06:0,21,232
chr10	106773699	.	GTATT	G	560.32	PASS	AB=0.957;AC=13;AF=0.260;AN=50;BaseQRankSum=5.059;DP=298;FS=1.009;HRun=0;HaplotypeScore=45.6863;InbreedingCoeff=0.5542;MQ=55.61;MQ0=4;MQRankSum=0.777;QD=5.39;ReadPosRankSum=0.164;VQSLOD=1.4075;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:9.03:0,9,211	1/1:3,1:4:3.01:47,3,0	./.	./.	0/0:14,0:14:12.04:0,12,282	0/0:11,0:11:21.07:0,21,477	0/0:5,0:5:9.03:0,9,185	1/1:28,0:26:6.01:71,6,0	0/0:7,0:7:12:0,12,231	0/0:4,0:4:3.01:0,3,71	0/0:8,0:8:9.03:0,9,210	0/0:6,0:6:9.03:0,9,211	0/0:7,0:7:12.04:0,12,280	0/0:8,0:8:3.01:0,3,71	0/0:7,0:7:15.02:0,15,278	0/0:10,0:10:6.02:0,6,141	0/0:26,0:26:39.12:0,39,853	0/0:25,0:25:27.07:0,27,574	1/1:9,1:10:3.01:47,3,0	1/1:10,2:12:3.01:47,3,0	1/1:10,5:15:12.04:187,12,0	0/0:3,0:3:3.01:0,3,70	./.	0/0:4,0:4:3.01:0,3,67	0/0:13,0:13:24.08:0,24,523	0/0:9,0:9:12.04:0,12,254	1/1:7,6:13:21.02:299,21,0	0/1:21,1:21:13.58:14,0,619
chr10	106774645	.	TTC	T	1091.44	PASS	AB=0.650;AC=36;AF=0.783;AN=46;BaseQRankSum=1.643;DP=118;FS=24.964;HRun=0;HaplotypeScore=48.7445;InbreedingCoeff=0.2867;MQ=70.18;MQ0=17;MQRankSum=-1.092;QD=13.15;ReadPosRankSum=1.955;VQSLOD=1.1556;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,2:3:5.99:48,6,0	./.	0/0:25,1:8:15.18:0,15,199	0/1:12,0:4:0.46:0,0,78	1/1:0,1:1:2.99:23,3,0	0/1:0,3:3:3.54:41,0,4	1/1:1,5:6:8.68:100,9,0	1/1:5,0:3:4.66:13,5,0	1/1:0,5:5:6.13:92,6,0	1/1:1,3:3:8.51:68,9,0	1/1:0,1:1:2.99:24,3,0	1/1:0,4:4:11.96:95,12,0	1/1:0,2:2:5.98:48,6,0	1/1:0,2:2:5.99:49,6,0	0/1:2,4:6:0.45:82,0,0	1/1:1,6:7:10.93:143,11,0	0/1:0,4:4:0.64:38,0,1	0/0:1,1:1:2.50:0,2,9	./.	0/0:1,0:1:2.37:0,2,8	./.	1/1:0,4:4:1.91:62,2,0	1/1:0,3:3:8.99:74,9,0	./.	1/1:0,2:2:5.94:43,6,0	1/1:1,2:3:3.23:54,3,0	1/1:0,5:5:14.67:114,15,0	./.
chr10	106774651	.	T	TC	1850.94	PASS	AB=0.947;AC=48;AF=0.960;AN=50;BaseQRankSum=-1.894;DP=142;FS=30.499;HRun=0;HaplotypeScore=52.9024;InbreedingCoeff=-0.0819;MQ=69.95;MQ0=9;MQRankSum=-3.524;QD=13.51;ReadPosRankSum=-0.379;VQSLOD=1.8232;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,3:4:5.95:42,6,0	1/1:1,1:2:5.92:40,6,0	0/1:23,1:8:17.69:18,0,136	0/1:13,1:5:22.26:22,0,30	1/1:0,1:1:2.97:20,3,0	1/1:0,4:4:10.92:67,11,0	1/1:1,5:6:17.72:118,18,0	1/1:6,0:5:11.98:119,12,0	1/1:2,6:8:20.86:166,21,0	1/1:2,3:4:10.56:86,11,0	1/1:0,1:1:2.98:21,3,0	1/1:0,4:4:11.87:82,12,0	1/1:2,3:5:11.89:96,12,0	1/1:2,2:4:5.96:42,6,0	1/1:3,6:9:26.61:179,27,0	1/1:1,6:7:20.78:148,21,0	1/1:0,4:4:11.78:74,12,0	1/1:0,1:1:2.90:16,3,0	./.	1/1:4,0:4:8.82:58,9,0	./.	1/1:1,4:5:14.73:95,15,0	1/1:0,3:3:8.93:64,9,0	./.	1/1:1,2:3:8.70:51,9,0	1/1:1,2:3:8.97:73,9,0	1/1:1,8:9:26.33:238,26,0	1/1:0,1:1:2.92:17,3,0
chr10	106774697	.	TGTAG	T	10799.85	PASS	AC=50;AF=1.000;AN=50;DP=276;FS=0.000;HRun=0;HaplotypeScore=57.2741;InbreedingCoeff=-0.0356;MQ=30.37;MQ0=36;QD=42.02;VQSLOD=4.7544;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:8:9.03:188,9,0	1/1:1,2:2:6.02:126,6,0	./.	./.	1/1:1,6:6:12.04:250,12,0	1/1:2,6:6:12.04:251,12,0	1/1:1,6:6:15.05:313,15,0	1/1:6,8:8:24.08:501,24,0	1/1:2,12:12:30.10:614,30,0	1/1:3,17:17:48.16:1006,48,0	1/1:0,3:3:3.01:63,3,0	1/1:0,14:14:42.14:878,42,0	1/1:2,13:11:33.11:689,33,0	1/1:1,9:9:18.06:376,18,0	1/1:0,18:18:36.12:753,36,0	1/1:0,21:21:39.13:816,39,0	1/1:0,6:6:12.04:251,12,0	1/1:1,3:3:6.02:126,6,0	1/1:3,13:13:39.11:775,39,0	1/1:2,12:12:24.08:502,24,0	./.	1/1:0,9:9:15.05:313,15,0	1/1:1,7:7:18.06:376,18,0	1/1:1,4:3:6.02:125,6,0	1/1:0,8:8:12.04:251,12,0	1/1:0,10:10:30.10:628,30,0	1/1:1,9:9:27.09:565,27,0	1/1:1,2:2:3.01:63,3,0
chr10	106778302	.	G	GGCAACGTGACCA	10433.41	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=1.367;DP=431;FS=6.925;HRun=0;HaplotypeScore=160.2417;InbreedingCoeff=0.9630;MQ=71.95;MQ0=0;MQRankSum=-11.729;QD=112.19;ReadPosRankSum=-4.246;VQSLOD=3.4424;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.16:0,60,1977	1/1:2,1:4:5.83:371,6,0	0/0:13,0:13:33.11:0,33,991	0/0:16,0:13:11.61:0,12,1063	0/0:18,0:18:44.50:0,44,1409	0/0:17,0:17:48.16:0,48,1689	0/0:36,0:36:99:0,102,3600	1/1:10,7:19:48.16:2597,48,0	0/0:12,0:12:36.12:0,36,1274	0/0:10,0:10:24.08:0,24,892	0/0:9,0:9:21.07:0,21,794	0/0:24,0:24:72.23:0,72,2588	0/0:10,0:10:30.10:0,30,1086	0/0:14,0:14:42.14:0,42,1509	0/0:15,0:15:42.14:0,42,1458	0/0:9,0:9:27.09:0,27,1042	0/0:25,0:24:69.20:0,69,2362	0/0:16,0:16:48.16:0,48,1757	1/1:4,5:12:36.11:1464,36,0	1/1:2,4:6:18.06:759,18,0	1/1:15,18:35:81.03:3223,81,0	0/0:10,0:10:30.10:0,30,1086	0/0:5,0:5:15.04:0,15,488	0/0:30,0:30:87.30:0,87,3199	0/0:8,0:8:24.08:0,24,887	0/0:10,0:10:30.10:0,30,1133	1/1:7,7:17:42.13:2020,42,0	0/0:9,0:9:21.07:0,21,811
chr10	106779586	.	CCA	C	433.97	PASS	AB=0.986;AC=17;AF=0.354;AN=48;BaseQRankSum=2.011;DP=1038;FS=9.898;HRun=0;HaplotypeScore=159.0935;InbreedingCoeff=-0.2020;MQ=53.31;MQ0=80;MQRankSum=0.204;QD=0.93;ReadPosRankSum=-2.535;VQSLOD=1.6654;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:35:1.48:0,1,210	1/1:13,1:11:3:31,3,0	./.	./.	0/0:22,0:20:3.01:0,3,39	0/1:32,0:31:13.34:13,0,182	0/0:65,0:55:25.03:0,25,350	./.	0/1:32,0:23:20.76:21,0,151	0/1:45,1:38:53.03:53,0,147	1/1:26,1:25:3:25,3,0	0/1:30,0:25:27.47:27,0,64	0/1:27,0:24:5.34:5,0,143	0/1:24,0:21:59.47:59,0,109	0/1:28,0:25:9.80:10,0,94	0/0:33,0:29:9.14:0,9,167	0/1:34,1:28:67.17:67,0,162	0/0:22,0:19:28.81:0,29,275	./.	0/0:24,0:22:3.01:0,3,44	0/0:105,0:88:8.46:0,8,180	0/1:39,2:40:98.03:98,0,154	0/0:20,0:19:2.97:0,3,44	0/1:61,2:58:99:100,0,407	1/1:29,0:23:2.99:23,3,0	0/1:33,0:27:4.54:38,0,5	0/0:12,0:11:4.15:0,4,48	0/0:11,0:13:5.04:0,5,31
chr10	106779680	.	C	CCA	1039.10	PASS	AB=0.941;AC=7;AF=0.135;AN=52;BaseQRankSum=1.709;DP=1258;FS=1.294;HRun=0;HaplotypeScore=163.3096;InbreedingCoeff=0.0858;MQ=34.31;MQ0=264;MQRankSum=-2.253;QD=2.92;ReadPosRankSum=-1.290;VQSLOD=2.7967;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:36:28.60:0,29,312	0/1:16,1:10:23.91:120,0,24	./.	./.	0/0:19,0:12:14.71:0,15,135	0/0:28,0:18:23.97:0,24,250	0/0:80,0:54:55.12:0,55,662	0/0:75,0:27:11.65:0,12,127	0/0:34,0:25:28.07:0,28,310	0/0:69,0:36:46.12:0,46,509	0/0:9,0:7:9.02:0,9,103	0/0:64,0:39:43.72:0,44,483	0/1:41,0:22:13.50:13,0,283	0/0:40,0:26:20.09:0,20,193	0/0:32,0:21:9.50:0,9,108	0/0:29,0:19:25.75:0,26,352	0/0:39,0:30:44.91:0,45,503	0/0:45,0:34:30.88:0,31,494	0/1:41,1:11:29.12:43,0,29	1/1:18,1:14:5.05:52,5,0	0/1:200,10:145:70.81:775,0,71	0/0:45,0:32:38.93:0,39,452	0/0:19,0:14:18.01:0,18,196	0/0:62,0:51:34.61:0,35,502	0/0:28,0:10:11.99:0,12,128	0/0:57,0:30:9.37:0,9,250	0/1:16,3:9:19.68:162,0,20	0/0:18,0:11:14.57:0,15,130
chr10	106780035	.	CCACA	C	2271.38	PASS	AB=0.830;AC=13;AF=0.250;AN=52;BaseQRankSum=3.505;DP=958;FS=2.227;HRun=0;HaplotypeScore=159.9111;InbreedingCoeff=0.6542;MQ=48.02;MQ0=49;MQRankSum=-0.425;QD=7.40;ReadPosRankSum=-1.609;VQSLOD=2.9099;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:56,1:56:22.94:23,0,1481	1/1:3,6:10:9.03:126,9,0	./.	./.	0/0:24,0:33:21.92:0,22,268	0/0:23,0:21:36.08:0,36,704	0/0:42,0:40:48.63:0,49,732	1/1:33,11:34:11.99:364,12,0	0/0:20,0:23:19.82:0,20,763	0/0:34,0:27:47.81:0,48,787	0/0:18,0:14:11.94:0,12,91	0/0:34,0:33:62.89:0,63,1283	0/0:24,0:26:47.82:0,48,1013	0/0:33,0:31:56.99:0,57,1178	0/0:27,0:28:47.56:0,48,917	0/0:30,0:32:62.13:0,62,1188	0/1:36,2:40:18.17:18,0,1272	0/0:30,0:31:71.18:0,71,1358	1/1:17,2:14:5.39:96,5,0	1/1:27,4:27:24.50:327,25,0	1/1:66,18:82:78.79:1261,79,0	0/0:38,0:37:47.61:0,48,765	0/0:24,0:18:23.82:0,24,489	0/0:48,0:46:80.88:0,81,1529	0/0:17,1:15:16.90:0,17,96	0/0:40,0:37:53.04:0,53,811	0/1:8,10:18:3.94:225,0,4	0/0:13,0:7:5.75:0,6,85
chr10	106782593	.	CCGAG	C	5480.50	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.657;DP=720;FS=1.269;HRun=0;HaplotypeScore=122.9287;InbreedingCoeff=0.9974;MQ=78.01;MQ0=0;MQRankSum=-1.720;QD=38.06;ReadPosRankSum=3.133;VQSLOD=5.2161;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:65:99:0,175,4400	1/1:0,7:7:18.06:327,18,0	0/0:19,0:19:54.18:0,54,1309	0/0:21,0:21:44.73:0,45,875	0/0:19,0:19:42.14:0,42,1040	0/0:22,0:22:60.21:0,60,1490	0/0:40,0:40:99:0,111,2761	1/1:4,18:22:51.14:870,51,0	0/0:25,0:25:66.23:0,66,1726	0/0:24,0:24:63.22:0,63,1547	0/0:12,0:11:24.05:0,24,506	0/0:33,0:33:99:0,99,2527	0/0:19,0:19:51.17:0,51,1269	0/0:33,0:33:96.33:0,96,2404	0/0:30,0:30:84.29:0,84,2161	0/0:25,0:25:69.24:0,69,1758	0/0:26,0:26:69.24:0,69,1786	0/0:34,0:34:93.32:0,93,2277	1/1:0,15:15:45.15:803,45,0	1/1:1,16:17:29.98:535,30,0	1/1:7,52:59:99:1909,105,0	0/0:16,0:16:42.13:0,42,1041	0/0:13,0:13:36.12:0,36,920	0/0:53,0:53:99:0,151,3869	0/0:19,0:19:42.14:0,42,1072	0/0:20,0:20:48.16:0,48,1151	1/1:0,24:24:57.20:1037,57,0	0/0:8,0:8:24.08:0,24,596
chr10	106783265	.	CCTTT	C	374.19	PASS	AB=0.960;AC=6;AF=0.107;AN=56;BaseQRankSum=4.814;DP=667;FS=18.741;HRun=0;HaplotypeScore=104.5616;InbreedingCoeff=-0.1227;MQ=56.65;MQ0=11;MQRankSum=-4.609;QD=2.67;ReadPosRankSum=-2.233;VQSLOD=0.4938;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1738	0/1:16,0:16:31.19:31,0,487	0/0:8,0:3:9.01:0,9,96	0/0:11,0:8:19.89:0,20,152	0/0:23,0:23:69.08:0,69,1235	0/0:17,0:17:27.27:0,27,715	0/0:29,0:29:58.42:0,58,1265	0/1:32,0:27:40.33:40,0,440	0/0:20,0:20:32.08:0,32,1049	0/0:32,0:30:86.01:0,86,1429	0/0:20,0:20:59.66:0,60,886	0/0:35,0:35:98.91:0,99,1631	0/0:28,0:28:75.15:0,75,1426	0/0:27,0:27:78.06:0,78,1329	0/0:38,0:38:90.71:0,91,1646	0/0:26,0:26:78.20:0,78,1509	0/0:31,0:31:66.78:0,67,1257	0/0:18,0:18:48.07:0,48,761	0/1:20,0:14:31.81:32,0,405	0/1:13,6:19:34.23:34,0,372	0/1:25,0:25:99:226,0,174	0/0:19,0:19:56.75:0,57,882	0/0:25,0:24:63.06:0,63,1038	0/0:21,0:21:63.13:0,63,1371	0/0:21,0:21:59.91:0,60,963	0/0:24,0:24:69.17:0,69,1351	0/1:28,0:27:99:135,0,538	0/0:14,0:13:39:0,39,631
chr10	106785155	.	C	CA	391.85	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-1.745;DP=286;FS=40.477;HRun=0;HaplotypeScore=50.7881;InbreedingCoeff=0.5580;MQ=54.46;MQ0=23;MQRankSum=-0.113;QD=5.44;ReadPosRankSum=1.000;VQSLOD=0.9987;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:13:8.90:0,9,98	0/0:3,0:3:0:0,0,0	0/0:11,0:10:26.93:0,27,261	0/0:16,0:9:6.55:0,7,214	0/0:8,0:8:5.98:0,6,61	0/0:9,0:8:2.88:0,3,16	0/0:21,0:20:32.26:0,32,232	1/1:4,7:10:8.89:65,9,0	0/0:8,0:6:5.78:0,6,31	0/0:5,0:4:3:0,3,26	0/0:7,0:7:6.39:0,6,40	0/0:16,0:16:8.73:0,9,77	0/0:15,0:14:14.65:0,15,118	0/0:12,0:11:19.24:0,19,141	0/0:8,0:7:2.68:0,3,30	0/0:10,0:10:8.29:0,8,76	0/0:13,0:13:20.65:0,21,151	0/1:4,0:3:0:0,0,0	1/1:1,2:3:5.77:31,6,0	1/1:0,9:10:11.68:115,12,0	1/1:30,1:30:16.21:213,16,0	0/0:5,0:5:3.79:0,4,17	0/0:3,0:3:2.60:0,3,24	0/0:11,0:8:8.70:0,9,80	0/0:9,0:7:5.96:0,6,44	0/0:7,0:7:14.74:0,15,104	1/1:9,4:12:5.33:113,5,0	0/0:1,0:1:2.98:0,3,21
chr10	106785436	.	A	AT	595.60	PASS	AB=0.853;AC=15;AF=0.278;AN=54;BaseQRankSum=2.795;DP=493;FS=8.088;HRun=12;HaplotypeScore=71.5741;InbreedingCoeff=0.1430;MQ=35.43;MQ0=84;MQRankSum=-1.237;QD=3.20;ReadPosRankSum=-2.603;VQSLOD=-0.6218;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:34:71.52:0,72,525	0/1:3,3:5:15.90:23,0,16	0/0:8,0:1:2.98:0,3,21	./.	0/1:22,2:27:36.58:37,0,77	0/0:10,1:10:13.93:0,14,93	0/0:26,0:18:29.66:0,30,213	1/1:10,8:11:14.98:136,15,0	0/1:16,1:14:5.43:5,0,129	0/0:17,0:14:32.76:0,33,237	0/0:19,0:17:6.36:0,6,140	0/0:14,1:10:20.72:0,21,153	0/1:14,1:9:11.24:11,0,91	0/0:14,0:11:17.83:0,18,131	0/0:21,1:18:6.62:0,7,212	0/0:14,0:9:20.71:0,21,153	0/0:33,0:29:70.58:0,71,505	0/0:15,0:15:27.17:0,27,186	1/1:6,6:6:8.38:67,8,0	0/1:7,9:16:19.78:151,0,20	1/1:4,8:7:18:175,18,0	0/0:5,7:11:5.57:0,6,43	0/0:10,0:9:11.90:0,12,87	0/0:22,1:17:25.13:0,25,235	0/1:15,0:12:11.98:12,0,53	0/1:20,1:15:21.01:21,0,145	0/1:10,5:11:5.07:104,0,5	0/1:9,2:11:17.30:17,0,54
chr10	106787353	.	TTG	T	2330.54	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=6.776;DP=449;FS=4.757;HRun=0;HaplotypeScore=58.0951;InbreedingCoeff=0.8635;MQ=74.16;MQ0=0;MQRankSum=3.280;QD=23.07;ReadPosRankSum=4.462;VQSLOD=3.9313;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.48:0,66,872	1/1:1,0:1:2.99:24,3,0	0/0:12,0:11:29.55:0,30,287	0/1:13,0:12:9.39:9,0,145	0/0:12,0:12:30.01:0,30,311	0/0:5,0:5:15.01:0,15,188	0/0:33,0:33:99:0,99,1426	1/1:0,7:7:20.97:193,21,0	0/0:18,0:18:48.07:0,48,753	0/0:16,0:16:42.11:0,42,650	0/0:12,0:12:29.19:0,29,336	0/0:19,0:19:51.45:0,51,554	0/0:17,0:17:39.73:0,40,316	0/0:13,0:13:38.95:0,39,336	0/0:13,0:13:39.04:0,39,536	0/0:14,0:14:42.08:0,42,640	0/0:33,0:33:96.16:0,96,1554	0/0:28,0:28:84.02:0,84,1156	1/1:0,4:14:38.88:419,39,0	1/1:0,11:12:26.91:345,27,0	1/1:1,34:36:66.19:1013,66,0	0/0:12,0:12:36.02:0,36,450	0/0:14,0:14:39.05:0,39,510	0/0:27,0:27:74.12:0,74,952	0/0:12,0:12:33.02:0,33,358	0/0:10,0:10:30.07:0,30,437	1/1:0,17:18:33.11:510,33,0	0/0:4,0:4:12.02:0,12,173
chr10	106788286	.	T	TGTCTCCAGGAAGCATCATCGGAAG	25209.30	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.191;DP=631;FS=8.491;HRun=0;HaplotypeScore=374.8610;InbreedingCoeff=0.9937;MQ=88.96;MQ0=0;MQRankSum=-15.063;QD=200.07;ReadPosRankSum=-2.807;VQSLOD=3.4088;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,163,9979	1/1:11,1:14:30.10:2457,30,0	0/0:27,0:27:75.25:0,75,3399	0/0:32,0:32:87.25:0,87,3910	0/0:10,0:10:27.09:0,27,1382	0/0:21,0:21:63.22:0,63,3720	0/0:43,0:43:99:0,129,7136	1/1:30,0:30:87.30:5724,87,0	0/0:18,0:18:54.19:0,54,3352	0/0:21,0:21:63.22:0,63,3618	0/0:6,0:6:18.06:0,18,1196	0/0:27,0:27:81.28:0,81,5032	0/0:19,0:19:54.17:0,54,3213	0/0:18,0:18:54.17:0,54,2840	0/0:28,0:28:81.26:0,81,5027	0/0:23,0:23:66.20:0,66,3843	0/0:28,0:28:84.29:0,84,5255	0/0:30,0:30:81.06:0,81,4494	1/1:13,2:17:51.17:4125,51,0	1/1:12,2:19:48.12:3372,48,0	1/1:23,0:23:55.90:3045,56,0	0/0:9,0:9:24.55:0,25,1380	0/0:5,0:5:15.05:0,15,861	0/0:39,0:39:99:0,117,6383	0/0:14,0:14:42.14:0,42,2512	0/0:23,0:23:66.23:0,66,3964	1/1:19,4:23:69.24:6486,69,0	0/0:7,0:7:21.05:0,21,1060
chr10	106792527	.	AAT	A	35.53	PASS	AB=0.919;AC=9;AF=0.173;AN=52;BaseQRankSum=4.723;DP=325;FS=7.971;HRun=0;HaplotypeScore=42.1940;InbreedingCoeff=-0.1069;MQ=81.93;MQ0=8;MQRankSum=0.932;QD=0.20;ReadPosRankSum=-1.882;VQSLOD=-0.1294;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:15,2:17:33.14:33,0,491	0/0:6,0:6:9.03:0,9,143	1/1:17,0:7:0.98:3,1,0	0/1:39,0:21:6.44:6,0,10	0/0:5,0:6:9.02:0,9,122	0/0:22,0:23:56.92:0,57,857	0/0:4,0:4:6.02:0,6,96	0/1:39,5:44:51.89:52,0,962	0/0:7,0:7:15.05:0,15,236	0/1:7,1:8:18.40:18,0,222	0/0:5,0:5:6.02:0,6,96	0/0:4,0:4:9.03:0,9,140	0/1:6,1:7:24.08:24,0,133	0/0:4,0:4:12.04:0,12,193	0/0:6,0:6:9.03:0,9,145	0/0:9,0:9:15.05:0,15,236	0/1:27,2:29:12.19:12,0,801	0/0:21,0:23:54.17:0,54,841	0/1:15,1:15:6.10:6,0,398	0/0:2,0:2:3.01:0,3,48	0/0:6,0:6:9.03:0,9,140	0/0:1,0:1:3.01:0,3,48	./.	./.	0/0:8,0:8:6.02:0,6,90	0/0:7,0:7:18.05:0,18,263	0/0:9,0:8:15.05:0,15,240	0/0:16,0:16:39.13:0,39,619
chr10	106793483	.	TG	T	1913.31	PASS	AB=0.861;AC=27;AF=0.482;AN=56;BaseQRankSum=6.051;DP=630;FS=5.229;HRun=11;HaplotypeScore=81.9252;InbreedingCoeff=-0.2009;MQ=72.68;MQ0=0;MQRankSum=0.070;QD=3.79;ReadPosRankSum=3.637;VQSLOD=0.4800;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:26,3:29:16.27:16,0,233	1/1:6,8:14:14.95:123,15,0	0/1:23,0:21:14.87:15,0,251	0/0:17,1:17:15.43:0,15,159	0/1:17,2:19:25.25:25,0,153	0/0:13,0:13:17.92:0,18,153	0/1:31,6:38:65.46:65,0,548	0/1:5,6:12:5.48:81,0,5	0/1:23,2:25:19.21:19,0,225	0/1:20,6:26:81.80:82,0,214	0/1:11,6:17:52.62:53,0,101	0/1:23,3:26:19.25:19,0,204	0/0:17,2:20:14:0,14,340	0/0:18,2:20:10.14:0,10,303	0/1:22,7:29:80.78:81,0,195	0/0:23,2:25:5.81:0,6,226	0/1:33,3:36:4.82:5,0,545	0/0:25,3:28:11.14:0,11,327	1/1:4,12:17:41.11:311,41,0	1/1:9,11:21:22.98:178,23,0	1/1:10,24:35:52.53:413,53,0	0/1:13,3:16:28.18:28,0,137	0/1:25,2:27:18.46:18,0,177	0/1:25,4:29:24.56:25,0,370	0/1:14,1:15:9.71:10,0,96	0/1:14,3:18:56.40:56,0,87	1/1:4,19:24:55.97:449,56,0	0/1:7,1:9:16.48:16,0,74
chr10	106794160	.	T	TA	6466.76	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-12.744;DP=820;FS=1.453;HRun=1;HaplotypeScore=83.8977;InbreedingCoeff=0.9999;MQ=85.57;MQ0=0;MQRankSum=-2.492;QD=40.67;ReadPosRankSum=-2.874;VQSLOD=4.2206;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,1780	1/1:0,12:12:33.11:495,33,0	0/0:35,0:35:87.06:0,87,1160	0/0:39,0:39:99:0,111,1376	0/0:19,0:19:54.18:0,54,701	0/0:21,0:21:60.19:0,60,766	0/0:35,0:35:99:0,102,1309	1/1:1,31:32:93.30:1374,93,0	0/0:28,0:28:84.24:0,84,1061	0/0:25,0:25:75.24:0,75,974	0/0:16,0:16:48.14:0,48,608	0/0:37,0:37:99:0,105,1351	0/0:27,0:27:81.25:0,81,1037	0/0:25,0:25:72.20:0,72,895	0/0:43,0:43:99:0,126,1621	0/0:37,0:37:99:0,105,1363	0/0:18,0:18:54.18:0,54,701	0/0:33,0:32:99:0,99,1285	1/1:4,24:28:78.23:1100,78,0	1/1:0,14:14:42.14:629,42,0	1/1:1,43:44:99:1663,111,0	0/0:25,0:25:69.20:0,69,895	0/0:23,0:23:66.19:0,66,829	0/0:44,0:44:99:0,132,1714	0/0:33,0:33:93.29:0,93,1192	0/0:27,0:27:75.23:0,75,949	1/1:2,27:29:84.17:1205,84,0	0/0:24,0:24:72.23:0,72,935
chr10	106795290	.	A	ATTCCTT	2070.87	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-1.187;DP=547;FS=18.866;HRun=0;HaplotypeScore=127.6850;InbreedingCoeff=0.9576;MQ=62.98;MQ0=14;MQRankSum=1.131;QD=18.17;ReadPosRankSum=-2.894;VQSLOD=1.6277;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:94.77:0,95,1547	1/1:10,0:10:20.91:213,21,0	0/0:36,0:18:41.67:0,42,464	0/0:54,0:17:24.71:0,25,345	0/0:24,0:24:50.88:0,51,736	0/0:12,0:12:33.10:0,33,536	0/0:24,0:23:29.98:0,30,921	1/1:34,0:32:65.72:920,66,0	0/0:16,0:15:31.69:0,32,387	0/0:25,0:25:61.13:0,61,889	0/0:19,0:19:40.57:0,41,666	0/0:16,0:15:36.07:0,36,475	0/0:15,0:13:30.07:0,30,409	0/0:12,0:12:30.09:0,30,495	0/0:15,0:13:24.01:0,24,340	0/0:12,0:12:17.74:0,18,304	0/0:23,0:23:47.96:0,48,672	0/0:21,0:21:38.49:0,38,556	1/1:27,0:24:21.02:484,21,0	1/1:5,13:19:30:334,30,0	1/1:10,0:8:15.03:213,15,0	0/0:4,0:4:9.02:0,9,114	0/0:10,0:10:27.38:0,27,373	0/0:9,0:9:23.81:0,24,382	0/0:13,0:13:32.97:0,33,565	0/0:13,0:13:25.81:0,26,385	1/1:14,0:12:5.99:88,6,0	0/0:18,0:18:48.10:0,48,872
chr10	106795303	.	T	TTTC	503.10	PASS	AB=0.939;AC=6;AF=0.107;AN=56;BaseQRankSum=6.580;DP=613;FS=1.961;HRun=0;HaplotypeScore=90.8838;InbreedingCoeff=-0.0418;MQ=52.05;MQ0=22;MQRankSum=3.189;QD=4.06;ReadPosRankSum=-1.023;VQSLOD=1.9443;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:53:99:0,117,923	0/1:5,7:12:11.87:93,0,12	0/0:29,0:11:3.15:0,3,110	0/0:49,0:12:10.31:0,10,100	0/0:30,0:30:66.11:0,66,477	0/0:19,0:19:46.08:0,46,368	0/0:23,0:20:31.89:0,32,433	0/1:33,0:30:74.03:203,0,74	0/0:14,0:13:33.19:0,33,213	0/0:21,0:21:54.43:0,54,453	0/0:23,0:23:51.81:0,52,407	0/0:20,0:19:6.53:0,7,225	0/0:16,0:14:34.58:0,35,235	0/0:13,0:13:28.23:0,28,239	0/0:19,0:16:30.87:0,31,220	0/0:13,0:13:30.66:0,31,222	0/0:28,0:25:31.23:0,31,313	0/0:26,0:26:50.30:0,50,341	0/1:29,0:26:63.98:146,0,64	0/1:20,0:20:53.10:80,0,53	0/1:8,0:6:4.82:76,0,5	0/0:6,0:6:10.23:0,10,77	0/0:13,0:13:27.14:0,27,199	0/0:13,0:13:24.35:0,24,201	0/0:21,0:21:45.28:0,45,376	0/0:17,0:17:41.23:0,41,300	0/1:22,0:20:29.45:29,0,34	0/0:20,0:18:44.93:0,45,513
chr10	106795305	.	T	TC	414.89	PASS	AB=0.945;AC=5;AF=0.089;AN=56;BaseQRankSum=6.311;DP=622;FS=2.922;HRun=0;HaplotypeScore=70.1636;InbreedingCoeff=-0.0336;MQ=51.64;MQ0=28;MQRankSum=4.643;QD=3.91;ReadPosRankSum=-0.094;VQSLOD=2.8679;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:53:99:0,138,1083	0/1:13,0:13:44.67:54,0,45	0/0:29,0:11:3.26:0,3,112	0/0:49,0:12:11.53:0,12,92	0/0:30,0:30:68.94:0,69,518	0/0:19,0:19:49.89:0,50,404	0/0:23,0:19:47.94:0,48,435	0/1:21,13:29:99:194,0,158	0/0:13,0:12:34.64:0,35,230	0/0:22,0:21:58.30:0,58,486	0/0:23,0:23:60.19:0,60,454	0/0:20,0:19:39.99:0,40,293	0/0:16,0:14:35.90:0,36,256	0/0:14,0:14:32.94:0,33,279	0/0:19,0:16:36.21:0,36,271	0/0:13,0:13:35.82:0,36,290	0/0:29,0:26:49.60:0,50,379	0/0:25,0:25:56.95:0,57,420	0/1:31,0:27:99:147,0,103	0/1:19,0:19:61.24:61,0,83	0/1:9,0:6:4.97:76,0,5	0/0:6,0:6:9.84:0,10,66	0/0:13,0:13:33.17:0,33,255	0/0:13,0:13:29.74:0,30,235	0/0:21,0:21:52.62:0,53,427	0/0:19,0:19:46.64:0,47,358	0/0:13,7:20:2.13:0,2,111	0/0:22,0:20:50.98:0,51,495
chr10	106798142	.	TC	T	3833.02	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.233;DP=603;FS=4.248;HRun=2;HaplotypeScore=58.7859;InbreedingCoeff=0.9840;MQ=66.53;MQ0=3;MQRankSum=-0.070;QD=36.16;ReadPosRankSum=-1.355;VQSLOD=3.5744;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,1872	1/1:1,9:10:27.09:344,27,0	0/0:24,1:14:32.68:0,33,417	0/0:18,0:6:9.03:0,9,134	0/0:17,0:17:51.16:0,51,743	0/0:17,0:17:51.17:0,51,764	0/0:24,0:24:72.22:0,72,1040	1/1:0,21:21:63.19:802,63,0	0/0:25,0:25:75.25:0,75,1104	0/0:28,0:28:84.28:0,84,1241	0/0:15,0:15:45.14:0,45,654	0/0:22,0:22:66.22:0,66,988	0/0:29,0:29:87.27:0,87,1263	0/0:29,0:29:87.29:0,87,1303	0/0:27,0:27:81.25:0,81,1192	0/0:29,0:29:84.28:0,84,1259	0/0:37,0:37:99:0,105,1523	0/0:22,0:21:63.21:0,63,940	1/1:0,19:19:57.19:739,57,0	1/1:2,8:10:21.07:273,21,0	1/1:2,26:28:78.25:1013,78,0	0/0:16,0:16:48.16:0,48,719	0/0:22,0:22:66.21:0,66,969	0/0:21,0:21:63.21:0,63,944	0/0:12,0:12:36.11:0,36,521	0/0:15,0:15:42.13:0,42,611	1/1:0,18:18:51.17:662,51,0	0/0:5,0:5:15.05:0,15,225
chr10	106800888	.	CCTTCCTTCCTTCCTTCCTTCCTT	C	1167.88	PASS	AB=0.967;AC=9;AF=0.173;AN=52;BaseQRankSum=4.050;DP=312;FS=0.000;HRun=0;HaplotypeScore=130.6337;InbreedingCoeff=0.6496;MQ=41.52;MQ0=66;MQRankSum=-2.546;QD=17.70;ReadPosRankSum=-3.364;VQSLOD=1.0531;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:22:54.18:0,54,2741	1/1:5,0:3:5.94:41,6,0	./.	0/0:1,0:1:3.01:0,3,31	0/0:5,0:4:9.03:0,9,589	0/0:8,0:6:17.94:0,18,367	0/0:26,0:15:42.14:0,42,1545	1/1:6,11:13:0.84:481,1,0	0/0:15,0:11:27.09:0,27,1153	0/0:12,0:6:18.05:0,18,652	0/0:5,0:5:15.04:0,15,668	0/0:7,0:7:14.83:0,15,486	0/0:8,0:7:18.06:0,18,968	0/0:9,0:7:21.07:0,21,1381	0/0:11,0:9:24.07:0,24,959	0/0:11,0:7:21.05:0,21,1185	0/0:14,0:13:20.22:0,20,1380	0/0:11,0:6:18.06:0,18,621	1/1:6,0:4:8.99:103,9,0	./.	0/1:28,1:18:99:238,0,538	0/0:3,0:3:6.02:0,6,399	0/0:15,0:13:39.13:0,39,1901	0/0:20,0:17:35.43:0,35,1811	0/0:10,0:8:20.96:0,21,698	0/0:8,0:7:18.06:0,18,1187	1/1:8,1:6:18.03:443,18,0	0/0:12,0:6:18.06:0,18,842
chr10	106800913	.	C	CT	209.80	PASS	AB=0.919;AC=6;AF=0.125;AN=48;BaseQRankSum=3.838;DP=247;FS=1.722;HRun=1;HaplotypeScore=33.1364;InbreedingCoeff=0.3179;MQ=36.41;MQ0=74;MQRankSum=-4.109;QD=3.68;ReadPosRankSum=0.023;VQSLOD=0.0579;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:17:36.06:0,36,443	./.	./.	./.	0/0:6,0:4:9.03:0,9,116	0/0:3,0:1:3.01:0,3,39	0/0:22,0:8:18.05:0,18,210	1/1:15,1:11:15.04:162,15,0	0/0:11,0:7:15.03:0,15,171	0/0:10,0:3:9.02:0,9,95	0/0:2,0:2:6.02:0,6,78	0/0:4,0:4:8.05:0,8,71	0/0:5,0:4:12.04:0,12,155	0/0:6,0:5:15.05:0,15,190	0/0:8,0:6:15.05:0,15,194	0/0:9,0:5:14.98:0,15,174	0/1:13,2:13:26.91:27,0,206	0/0:10,0:4:4.57:0,5,57	1/1:2,1:1:3.01:42,3,0	./.	0/1:21,1:12:89.76:97,0,90	0/0:4,0:4:9.02:0,9,103	0/0:14,0:12:27.06:0,27,309	0/0:13,0:11:14.73:0,15,189	0/0:7,0:5:11.90:0,12,127	0/0:7,0:5:9.03:0,9,117	0/0:6,0:3:3.31:0,3,22	0/0:9,0:4:12:0,12,136
chr10	106802261	.	AC	A	1135.96	PASS	AB=0.812;AC=15;AF=0.268;AN=56;BaseQRankSum=7.243;DP=489;FS=6.964;HRun=10;HaplotypeScore=65.9478;InbreedingCoeff=0.3170;MQ=78.06;MQ0=1;MQRankSum=-1.142;QD=6.31;ReadPosRankSum=2.252;VQSLOD=1.1185;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,3:50:20.09:0,20,937	0/1:3,12:15:4.21:224,0,4	0/0:27,0:21:38.17:0,38,337	0/0:15,0:12:11.99:0,12,119	0/0:9,0:9:6:0,6,205	0/0:13,0:13:33.03:0,33,329	0/1:18,2:20:3.10:3,0,408	1/1:13,9:22:6.79:165,7,0	0/0:14,0:15:35.90:0,36,360	0/1:10,1:11:8.11:8,0,125	0/0:4,0:4:9.02:0,9,99	0/0:19,0:19:34.09:0,34,498	0/0:25,2:27:37.08:0,37,610	0/0:18,1:19:13:0,13,342	0/0:24,2:26:6.45:0,6,535	0/1:18,3:21:30.03:30,0,369	0/1:19,2:21:6.90:7,0,376	0/0:17,0:17:16.95:0,17,406	1/1:4,8:12:26.99:234,27,0	1/1:4,3:7:8.79:58,9,0	0/1:6,15:21:24.17:270,0,24	0/1:12,0:13:14.47:14,0,84	0/0:9,0:9:26.86:0,27,265	0/0:17,0:18:17.91:0,18,399	0/0:14,0:14:33.05:0,33,339	0/0:14,0:14:4.35:0,4,246	1/1:4,12:17:33.37:288,33,0	0/0:12,1:13:0.98:0,1,213
chr10	106802387	.	A	AC	2857.15	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=2.842;DP=564;FS=4.072;HRun=6;HaplotypeScore=64.6335;InbreedingCoeff=0.9934;MQ=71.34;MQ0=0;MQRankSum=-1.644;QD=26.21;ReadPosRankSum=-3.260;VQSLOD=2.5677;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,108,1075	1/1:0,12:12:30.10:377,30,0	0/0:16,0:16:32.27:0,32,301	0/0:20,0:18:37.28:0,37,352	0/0:7,0:7:18.04:0,18,184	0/0:20,0:20:57.12:0,57,574	0/0:24,0:24:60.13:0,60,611	1/1:3,18:21:48.11:558,48,0	0/0:19,0:19:54.12:0,54,550	0/0:21,0:21:54.12:0,54,550	0/0:9,0:9:21.04:0,21,214	0/0:30,0:30:75.14:0,75,757	0/0:14,0:14:33.07:0,33,336	0/0:31,0:31:78.15:0,78,788	0/0:21,0:21:60.13:0,60,610	0/0:20,0:20:54.12:0,54,551	0/0:37,0:37:96.21:0,96,979	0/0:36,0:36:90.19:0,90,917	1/1:3,17:20:51.16:638,51,0	1/1:0,7:7:18.06:226,18,0	1/1:2,30:32:69.22:868,69,0	0/0:13,0:13:30.06:0,30,299	0/0:6,0:6:18.04:0,18,184	0/0:26,0:26:69.15:0,69,704	0/0:22,0:22:60.09:0,60,594	0/0:13,0:13:33.06:0,33,331	1/1:2,15:17:30.10:377,30,0	0/0:8,0:8:24.05:0,24,244
chr10	106809357	.	CAAA	C	2175.55	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=8.184;DP=558;FS=2.148;HRun=15;HaplotypeScore=90.8397;InbreedingCoeff=0.8997;MQ=70.48;MQ0=2;MQRankSum=-2.143;QD=16.61;ReadPosRankSum=2.044;VQSLOD=2.9889;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:36:88.94:0,89,1433	1/1:4,6:11:16.45:194,16,0	0/0:26,0:13:27.96:0,28,383	0/1:12,0:11:11.26:11,0,84	0/0:26,1:31:76.01:0,76,1209	0/0:19,0:21:57.17:0,57,967	0/0:19,0:22:56.88:0,57,864	1/1:8,16:27:49.48:540,49,0	0/0:10,0:10:15.05:0,15,270	0/0:17,0:18:40.38:0,40,699	0/0:12,0:14:33.09:0,33,555	0/0:15,0:19:36.11:0,36,588	0/0:10,0:11:30.07:0,30,477	0/0:15,0:15:37.37:0,37,610	0/0:9,0:11:24.08:0,24,385	0/0:9,0:12:24.07:0,24,383	0/0:29,0:32:84.24:0,84,1448	0/0:23,0:25:72.20:0,72,1170	1/1:7,9:19:26.86:314,27,0	1/1:1,21:22:54.06:606,54,0	1/1:5,12:19:35.57:363,36,0	0/0:13,0:16:40.34:0,40,654	0/0:18,0:20:48.42:0,48,679	0/0:27,0:28:72.18:0,72,1165	0/0:10,0:17:37.37:0,37,606	0/0:21,0:24:54.10:0,54,797	1/1:7,13:20:29.85:336,30,0	0/0:17,0:19:51.14:0,51,774
chr10	106809486	.	TTTTCTTTCTTTCTTTCTTTCTTTCTTTC	T	3083.76	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=6.727;DP=509;FS=1.614;HRun=0;HaplotypeScore=335.5014;InbreedingCoeff=0.8288;MQ=64.51;MQ0=2;MQRankSum=-5.323;QD=26.13;ReadPosRankSum=-0.402;VQSLOD=1.4320;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:72.25:0,72,7108	1/1:3,5:8:5.98:236,6,0	0/1:14,0:11:4.65:5,0,80	0/0:9,0:7:3:0,3,25	0/0:19,0:19:42.14:0,42,4283	0/0:26,0:26:60.19:0,60,6141	0/0:11,0:11:27.08:0,27,2454	1/1:26,0:25:17.90:180,18,0	0/0:9,0:21:33.11:0,33,3001	0/0:26,0:26:69.24:0,69,6474	0/0:6,0:18:48.14:0,48,4328	0/0:14,0:14:30.10:0,30,3236	0/0:8,0:8:15.05:0,15,1727	0/0:16,0:16:42.13:0,42,4550	0/0:12,0:12:27.09:0,27,2538	0/0:16,0:15:42.14:0,42,5023	0/0:25,0:25:60.21:0,60,5682	0/0:23,0:23:51.10:0,51,4471	1/1:15,5:19:11.97:285,12,0	1/1:2,14:16:24.04:1395,24,0	1/1:8,7:15:5.74:292,6,0	0/0:12,0:12:27.08:0,27,3030	0/0:14,0:14:27.01:0,27,2774	0/0:16,0:16:34.36:0,34,3976	0/0:24,0:24:39.13:0,39,4643	0/0:27,0:27:63.21:0,63,7681	1/1:9,10:19:12.04:864,12,0	0/0:23,0:23:60.19:0,60,5997
chr10	106813712	.	CG	C	1004.83	PASS	AB=0.889;AC=13;AF=0.232;AN=56;BaseQRankSum=2.962;DP=382;FS=3.981;HRun=2;HaplotypeScore=47.4726;InbreedingCoeff=0.8009;MQ=48.12;MQ0=18;MQRankSum=-3.060;QD=15.00;ReadPosRankSum=-0.950;VQSLOD=2.9479;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:23:44.91:0,45,491	1/1:3,0:3:5:36,5,0	0/0:10,1:4:4.40:0,4,68	0/1:7,1:4:13.25:23,0,13	0/0:14,0:12:13.61:0,14,188	0/0:22,0:21:30.15:0,30,351	0/0:22,0:20:53.92:0,54,668	1/1:3,7:9:24.02:259,24,0	0/0:10,0:10:27.04:0,27,337	0/0:13,0:13:32.84:0,33,380	0/0:10,0:10:19.63:0,20,179	0/0:13,0:12:29.73:0,30,302	0/0:11,0:11:23.96:0,24,268	0/0:11,0:10:20.80:0,21,200	0/0:14,0:14:37.95:0,38,413	0/0:9,0:9:24.08:0,24,335	0/0:24,0:24:52.42:0,52,652	0/0:15,0:14:28.92:0,29,326	1/1:9,3:12:31.49:248,31,0	1/1:1,6:7:11.92:103,12,0	1/1:4,9:13:18.04:203,18,0	0/0:8,0:8:20.91:0,21,214	0/0:11,0:11:26.96:0,27,286	0/0:29,0:27:50.98:0,51,606	0/0:14,0:14:35.27:0,35,396	0/0:18,0:15:14.86:0,15,295	1/1:8,6:14:30.49:312,30,0	0/0:9,0:8:2.07:0,2,200
chr10	106813713	.	GGA	G	483.50	PASS	AB=0.880;AC=7;AF=0.125;AN=56;BaseQRankSum=5.242;DP=414;FS=3.061;HRun=0;HaplotypeScore=57.5430;InbreedingCoeff=0.2200;MQ=48.15;MQ0=18;MQRankSum=-2.376;QD=7.44;ReadPosRankSum=1.149;VQSLOD=3.1305;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:30:65.89:0,66,849	0/1:3,0:3:10.27:13,0,10	0/0:12,0:5:12.50:0,12,162	0/0:9,0:5:2.44:0,2,28	0/0:14,0:12:26.78:0,27,271	0/0:21,0:20:36.48:0,36,521	0/0:22,0:20:47.51:0,48,852	0/1:10,0:11:18.67:93,0,19	0/0:10,0:10:27.05:0,27,427	0/0:14,0:14:38.95:0,39,535	0/0:10,0:10:20.03:0,20,240	0/0:15,0:14:36.07:0,36,483	0/0:12,0:12:29.93:0,30,399	0/0:11,0:10:20.76:0,21,221	0/0:15,0:15:41.99:0,42,584	0/0:11,0:11:27.09:0,27,482	0/0:25,0:25:56.55:0,57,912	0/0:19,0:18:44.03:0,44,556	0/1:9,3:13:7.02:179,0,7	0/1:7,1:8:13.09:65,0,13	0/1:14,2:16:55.98:105,0,56	0/0:9,0:9:24.01:0,24,321	0/0:11,0:11:32.88:0,33,423	0/0:31,0:29:54.04:0,54,817	0/0:15,0:15:42.06:0,42,573	0/0:19,0:16:20.92:0,21,422	1/1:12,1:13:24.79:163,25,0	0/0:11,0:9:6.24:0,6,304
chr10	106815406	.	A	AGCT	1354.32	PASS	AC=12;AF=0.250;AN=48;BaseQRankSum=-4.506;DP=454;FS=5.158;HRun=0;HaplotypeScore=68.7322;InbreedingCoeff=0.8028;MQ=62.90;MQ0=5;MQRankSum=-0.271;QD=13.82;ReadPosRankSum=-0.950;VQSLOD=2.4050;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:5.86:0,6,82	1/1:5,6:11:15.05:295,15,0	./.	0/0:14,0:13:14.90:0,15,181	./.	0/0:17,0:17:21.07:0,21,284	0/0:19,0:19:27.06:0,27,336	1/1:11,2:14:6.01:85,6,0	0/0:18,0:18:30.10:0,30,410	0/0:11,0:11:6.02:0,6,82	0/0:5,0:5:3.01:0,3,41	0/0:19,0:19:39.13:0,39,533	0/0:16,0:16:36.11:0,36,469	0/0:20,0:20:33.11:0,33,451	0/0:24,0:24:48.16:0,48,656	0/0:13,0:13:27.09:0,27,369	0/0:35,0:35:72.24:0,72,978	0/0:27,0:27:60.20:0,60,818	1/1:17,3:22:15.51:260,16,0	1/1:5,1:7:3.01:59,3,0	1/1:20,9:30:15.05:295,15,0	./.	./.	0/0:33,0:33:75.25:0,75,1024	0/0:19,0:19:15.05:0,15,204	0/0:15,0:15:2.99:0,3,27	1/1:5,9:14:27.09:521,27,0	0/0:10,0:10:12.04:0,12,164
chr10	106816088	.	AGTTTTT	A	1650.50	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.264;DP=475;FS=2.502;HRun=0;HaplotypeScore=97.2897;InbreedingCoeff=0.9104;MQ=72.78;MQ0=0;MQRankSum=-7.738;QD=17.19;ReadPosRankSum=-0.319;VQSLOD=2.8790;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:72.25:0,72,2296	1/1:3,7:10:15.05:311,15,0	0/0:17,0:15:8.23:0,8,130	0/0:14,0:13:12.04:0,12,350	0/0:18,0:18:42.14:0,42,1221	0/0:12,0:12:27.09:0,27,882	0/0:21,0:21:36.12:0,36,1160	1/1:19,5:24:15.04:263,15,0	0/0:9,0:9:24.08:0,24,764	0/0:22,0:22:54.18:0,54,1692	0/0:6,0:6:9.03:0,9,291	0/0:11,0:11:24.08:0,24,784	0/0:11,0:11:18.06:0,18,524	0/0:14,0:14:36.12:0,36,1176	0/0:10,0:10:21.07:0,21,644	0/0:10,0:10:24.08:0,24,783	0/0:39,0:39:87.30:0,87,2780	0/0:21,0:20:48.16:0,48,1558	1/1:14,6:20:17.87:321,18,0	1/1:4,5:9:12.04:248,12,0	1/1:8,4:12:3.01:62,3,0	0/0:9,0:9:18.06:0,18,544	0/0:6,0:6:18.06:0,18,532	0/0:18,0:18:30.10:0,30,946	0/0:21,0:21:57.20:0,57,1860	0/0:28,0:28:63.22:0,63,2005	1/1:9,12:21:30.10:621,30,0	0/0:32,0:32:69.24:0,69,2233
chr10	106816406	.	C	CTT	641.04	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=0.619;DP=270;FS=20.643;HRun=13;HaplotypeScore=40.8420;InbreedingCoeff=0.6921;MQ=75.17;MQ0=8;MQRankSum=-3.978;QD=11.25;ReadPosRankSum=-1.886;VQSLOD=0.0488;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:16:23.71:0,24,250	1/1:1,2:3:6.02:82,6,0	0/0:9,0:9:7.68:0,8,53	0/0:7,0:6:2.61:0,3,19	0/0:14,0:13:19.94:0,20,183	0/0:12,0:13:20.57:0,21,169	0/0:4,0:4:5.92:0,6,53	1/1:17,9:23:11.16:349,11,0	0/0:3,0:3:5.94:0,6,53	0/0:15,0:16:17.55:0,18,247	0/0:7,0:6:8.95:0,9,79	0/0:7,0:7:14.97:0,15,132	0/0:10,0:10:7.06:0,7,76	0/0:6,0:6:14.98:0,15,128	0/0:18,0:17:26.69:0,27,233	0/0:6,0:5:8.95:0,9,79	0/0:21,0:20:50.82:0,51,432	0/0:14,0:14:23.87:0,24,203	1/1:2,2:5:11.06:116,11,0	1/1:1,2:3:5.98:61,6,0	1/1:5,0:5:6.38:40,6,0	0/0:1,0:1:2.80:0,3,13	0/0:3,0:3:2.99:0,3,26	0/0:4,0:4:2.86:0,3,19	0/0:6,0:7:17.74:0,18,144	0/0:11,0:13:17.46:0,17,188	1/1:6,5:10:15.75:155,16,0	0/0:12,0:13:26.70:0,27,269
chr10	106817257	.	TACATACACTCTC	T	4017.51	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=3.749;DP=774;FS=3.159;HRun=0;HaplotypeScore=269.1121;InbreedingCoeff=0.9035;MQ=59.09;MQ0=3;MQRankSum=-3.662;QD=24.20;ReadPosRankSum=0.545;VQSLOD=2.3315;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:50:99:0,110,4464	1/1:7,1:8:12.04:304,12,0	0/0:39,0:33:71.46:0,71,1811	0/0:31,0:24:41.81:0,42,1106	0/0:32,0:32:72.25:0,72,3427	0/0:20,0:20:42.14:0,42,2107	0/0:24,0:24:42.14:0,42,1835	1/1:29,0:28:56.34:947,56,0	0/0:33,0:32:81.28:0,81,3707	0/0:31,0:31:78.27:0,78,3696	0/0:15,0:15:35.71:0,36,1190	0/0:27,0:27:54.15:0,54,2335	0/0:21,0:21:48.15:0,48,2026	0/0:29,0:29:69.22:0,69,2936	0/0:37,0:37:99:0,99,4272	0/0:29,0:29:75.24:0,75,3190	0/0:26,0:26:48.16:0,48,2284	0/1:29,0:29:7.61:8,0,2872	1/1:12,4:15:24.07:664,24,0	1/1:10,9:19:18.06:428,18,0	1/1:36,3:39:16.98:356,17,0	0/0:29,0:29:75.16:0,75,3048	0/0:23,0:23:54.18:0,54,2408	0/0:32,0:32:84.23:0,84,3923	0/0:16,0:16:39.12:0,39,1799	0/0:42,0:42:99:0,102,4364	1/1:19,7:26:54.13:1310,54,0	0/0:21,0:21:57.12:0,57,2153
chr10	106817320	.	ACT	A	4089.52	PASS	AB=0.533;AC=11;AF=0.196;AN=56;BaseQRankSum=12.524;DP=933;FS=7.672;HRun=0;HaplotypeScore=135.6155;InbreedingCoeff=0.8727;MQ=58.12;MQ0=21;MQRankSum=-0.937;QD=22.47;ReadPosRankSum=-2.222;VQSLOD=3.7087;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,114,1906	1/1:0,7:6:8.98:98,9,0	0/0:62,0:29:72.37:0,72,1247	0/0:58,0:30:42.31:0,42,735	0/0:26,0:26:66.19:0,66,1112	0/0:32,0:31:84.26:0,84,1476	0/0:23,0:23:57.13:0,57,904	1/1:5,42:46:99:1368,108,0	0/0:32,0:32:90.28:0,90,1527	0/0:38,0:38:99:0,111,1925	0/0:16,0:16:45.13:0,45,785	0/0:31,0:31:84.16:0,84,1440	0/0:29,0:29:87.10:0,87,1477	0/0:40,0:40:99:0,114,2026	0/0:40,0:40:99:0,117,2003	0/0:33,0:33:96.28:0,96,1661	0/0:30,0:30:81.24:0,81,1388	0/0:40,0:40:99:0,100,2004	0/1:3,21:24:30.63:703,0,31	1/1:1,24:25:33.05:472,33,0	1/1:13,50:61:78.26:1112,78,0	0/0:29,0:28:81.25:0,81,1412	0/0:28,0:28:84.23:0,84,1406	0/0:36,0:36:99:0,102,1805	0/0:26,0:26:72.19:0,72,1190	0/0:41,0:41:99:0,123,2105	1/1:1,15:15:24.08:337,24,0	0/0:15,0:15:45.06:0,45,724
chr10	106826345	.	CAGT	C	423.37	PASS	AB=0.750;AC=18;AF=0.900;AN=20;BaseQRankSum=-1.736;DP=79;FS=6.368;HRun=0;HaplotypeScore=39.7158;InbreedingCoeff=-0.0145;MQ=56.07;MQ0=0;MQRankSum=-1.736;QD=10.86;ReadPosRankSum=0.992;VQSLOD=1.7935;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	1/1:1,0:1:2.04:6,2,0	0/1:4,0:3:11.51:12,0,26	0/1:0,4:4:0.05:0,0,0	./.	./.	./.	./.	1/1:0,1:1:3.01:41,3,0	./.	./.	./.	./.	./.	./.	1/1:0,4:3:2.94:18,3,0	1/1:0,2:2:3.01:49,3,0	1/1:0,2:1:3.01:47,3,0	1/1:0,6:6:3.01:39,3,0	./.	./.	./.	./.	./.	1/1:0,7:5:15.05:241,15,0	1/1:0,8:8:3.01:48,3,0	./.
chr10	106826374	.	CA	C	2992.22	PASS	AC=46;AF=0.958;AN=48;BaseQRankSum=-0.834;DP=151;FS=18.865;HRun=2;HaplotypeScore=37.5922;InbreedingCoeff=0.2156;MQ=31.53;MQ0=5;MQRankSum=-1.732;QD=23.94;ReadPosRankSum=0.620;VQSLOD=1.8854;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:6.02:78,6,0	1/1:0,2:2:3.01:39,3,0	0/0:6,0:1:3.01:0,3,44	./.	1/1:0,4:4:5.87:78,6,0	1/1:0,7:7:12.04:155,12,0	./.	1/1:2,7:9:21.07:270,21,0	1/1:0,3:3:6.02:78,6,0	1/1:1,4:4:9.03:111,9,0	1/1:0,4:4:6.02:78,6,0	1/1:0,4:4:6.02:78,6,0	1/1:0,5:5:6.02:74,6,0	1/1:1,8:8:12.04:152,12,0	1/1:0,5:4:9.03:117,9,0	1/1:0,3:3:6.02:78,6,0	1/1:0,4:3:9.03:117,9,0	1/1:0,3:3:9.03:117,9,0	1/1:1,6:7:18.06:230,18,0	1/1:0,7:7:21.07:272,21,0	./.	1/1:0,6:5:9.03:117,9,0	./.	1/1:0,4:4:6.02:78,6,0	1/1:0,10:9:12.04:152,12,0	1/1:0,10:8:18.06:233,18,0	1/1:0,10:10:24.08:307,24,0	1/1:0,2:2:6.02:78,6,0
chr10	106826397	.	T	TTG	5675.15	PASS	AB=0.538;AC=47;AF=0.979;AN=48;BaseQRankSum=-0.866;DP=261;FS=0.000;HRun=0;HaplotypeScore=50.7327;InbreedingCoeff=-0.0705;MQ=27.45;MQ0=28;MQRankSum=-1.700;QD=27.02;ReadPosRankSum=1.347;VQSLOD=5.5131;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:9:9.03:162,9,0	1/1:1,2:3:6.02:91,6,0	./.	./.	1/1:0,7:6:2.82:54,3,0	1/1:2,11:11:15.05:253,15,0	./.	1/1:1,11:9:27.09:485,27,0	1/1:0,7:6:9.03:162,9,0	1/1:0,7:6:15.05:270,15,0	1/1:1,4:5:9.03:145,9,0	1/1:0,7:6:12.04:215,12,0	1/1:1,7:6:6.02:108,6,0	1/1:1,9:9:9.03:161,9,0	0/1:1,6:6:23.26:200,0,23	1/1:0,4:4:6.02:108,6,0	1/1:2,11:9:15.05:269,15,0	1/1:1,8:9:18.06:322,18,0	1/1:4,9:11:24.08:431,24,0	1/1:1,7:7:18.06:323,18,0	./.	1/1:1,7:7:9.03:162,9,0	1/1:0,4:4:6.02:108,6,0	1/1:1,8:8:6.02:108,6,0	1/1:0,11:10:18.06:323,18,0	1/1:0,14:11:24.08:431,24,0	1/1:1,15:13:33.11:570,33,0	1/1:0,5:4:12.04:216,12,0
chr10	106827705	.	G	GCTT	2701.99	PASS	AB=0.976;AC=36;AF=0.818;AN=44;BaseQRankSum=1.160;DP=591;FS=8.522;HRun=0;HaplotypeScore=92.9487;InbreedingCoeff=0.3702;MQ=68.16;MQ0=10;MQRankSum=-1.459;QD=6.53;ReadPosRankSum=-3.109;VQSLOD=1.0637;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:5.71:72,6,0	0/0:10,0:10:5.93:0,6,40	./.	./.	1/1:27,0:26:20.70:181,21,0	1/1:18,3:22:3.01:55,3,0	./.	./.	1/1:18,0:17:18:166,18,0	1/1:22,2:22:24.05:288,24,0	1/1:23,0:23:17.95:185,18,0	0/1:19,1:20:15.32:146,0,15	1/1:11,1:12:3.01:55,3,0	1/1:14,6:21:3.01:55,3,0	1/1:29,0:28:29.64:247,30,0	1/1:8,0:8:6.01:68,6,0	1/1:27,0:26:6:71,6,0	1/1:22,2:24:15.25:292,15,0	0/0:26,0:25:5.46:0,5,51	./.	0/0:22,0:22:8.11:0,8,63	./.	1/1:18,0:18:6.48:76,6,0	1/1:16,6:22:2.02:104,2,0	1/1:18,3:21:24.03:315,24,0	1/1:33,0:32:26.37:278,26,0	0/1:21,0:21:14.23:14,0,85	1/1:22,0:22:17.99:166,18,0
chr10	106827765	.	TCTTC	T	903.38	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=0.527;DP=472;FS=6.607;HRun=0;HaplotypeScore=81.5774;InbreedingCoeff=0.6494;MQ=50.41;MQ0=24;MQRankSum=-4.314;QD=11.15;ReadPosRankSum=-0.960;VQSLOD=2.1171;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:44.99:0,45,514	1/1:0,7:7:11.40:147,11,0	0/0:15,0:2:2.04:0,2,6	0/0:15,0:2:3.40:0,3,17	0/0:24,0:23:49.01:0,49,628	0/0:10,0:9:13.37:0,13,202	0/0:13,0:12:30.43:0,30,265	1/1:37,0:27:42.15:543,42,0	0/0:16,0:15:41.34:0,41,625	0/0:27,0:24:57.98:0,58,957	0/0:15,0:14:31.42:0,31,490	0/0:19,0:17:29.47:0,29,391	0/0:8,0:7:18.02:0,18,194	0/0:14,0:14:24.04:0,24,293	0/0:19,0:18:51.02:0,51,702	0/0:10,0:10:27.03:0,27,307	0/0:16,0:15:23.95:0,24,359	0/0:28,0:29:31.63:0,32,952	0/1:25,0:21:99:225,0,228	1/1:2,9:11:2.19:122,2,0	0/0:9,0:8:7.16:0,7,183	0/0:10,0:9:27.01:0,27,268	0/0:8,0:8:18.51:0,19,250	0/0:14,0:14:23.73:0,24,278	0/0:20,0:19:54.98:0,55,803	0/0:26,0:25:61.90:0,62,948	0/0:22,0:22:30.01:0,30,547	0/0:10,0:10:24.06:0,24,409
chr10	106827768	.	TC	T	907.62	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=0.817;DP=479;FS=1.360;HRun=1;HaplotypeScore=63.3821;InbreedingCoeff=0.6003;MQ=50.21;MQ0=20;MQRankSum=-5.216;QD=10.94;ReadPosRankSum=-0.452;VQSLOD=1.4331;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:44.83:0,45,387	1/1:7,0:7:11.34:89,11,0	0/0:18,0:3:5.29:0,5,34	0/0:16,0:2:2.92:0,3,17	0/0:23,0:22:45.80:0,46,414	0/0:10,0:10:13.30:0,13,138	0/0:13,0:12:27.48:0,27,247	1/1:23,17:29:45.91:565,46,0	0/0:16,0:15:41.31:0,41,411	0/0:24,0:24:57.77:0,58,574	0/0:16,0:15:30.66:0,31,282	0/0:19,0:17:29.37:0,29,239	0/0:8,0:7:17.98:0,18,158	0/0:15,0:15:23.97:0,24,205	0/0:21,0:20:46.48:0,46,365	0/0:10,0:10:26.92:0,27,234	0/0:19,0:17:26.74:0,27,280	0/0:29,0:29:23.84:0,24,497	0/1:25,0:21:63.32:283,0,63	0/1:11,0:11:0.79:102,0,1	0/0:8,0:7:4.44:0,4,58	0/0:8,0:7:20.93:0,21,179	0/0:8,0:8:18.01:0,18,170	0/0:15,0:15:25.67:0,26,202	0/0:21,0:20:54.82:0,55,481	0/0:27,0:26:61.71:0,62,590	0/0:22,0:22:21.40:0,21,165	0/0:10,0:10:23.90:0,24,191
chr10	106827771	.	T	TC	633.19	PASS	AB=0.969;AC=13;AF=0.232;AN=56;BaseQRankSum=5.685;DP=474;FS=9.875;HRun=0;HaplotypeScore=60.6870;InbreedingCoeff=-0.3532;MQ=50.35;MQ0=12;MQRankSum=0.279;QD=2.69;ReadPosRankSum=-2.740;VQSLOD=0.5664;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:37.68:38,0,418	0/0:7,0:7:11.53:0,12,66	0/0:18,0:3:3.89:0,4,37	0/0:17,0:2:2.69:0,3,18	0/1:22,1:23:34.70:35,0,357	0/0:10,0:10:10.13:0,10,192	0/0:14,0:13:32.55:0,33,385	0/0:37,0:31:65.37:0,65,437	0/1:17,0:16:63.52:64,0,329	0/1:24,0:24:99:114,0,457	0/1:14,1:14:71.52:72,0,154	0/1:11,8:17:9.79:10,0,264	0/0:7,2:8:7.62:0,8,190	0/0:13,0:13:7.26:0,7,188	0/1:21,0:20:99:134,0,266	0/1:10,0:10:13.98:14,0,253	0/1:19,0:17:2.01:2,0,314	0/1:25,0:25:74.75:75,0,393	0/0:24,0:20:32.02:0,32,294	0/0:12,0:12:11.53:0,12,82	0/0:8,0:8:4.60:0,5,71	0/0:5,2:6:15.05:0,15,200	0/1:10,0:10:10.32:10,0,163	0/0:14,0:14:0.39:0,0,172	0/1:20,0:19:74.13:74,0,363	0/0:26,0:25:3.32:0,3,568	0/0:23,0:23:18.75:0,19,158	0/1:12,0:12:80.37:136,0,80
chr10	106828123	.	GGAGAGA	G	1971.47	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.098;DP=528;FS=7.112;HRun=0;HaplotypeScore=114.1137;InbreedingCoeff=0.8835;MQ=67.89;MQ0=4;MQRankSum=-2.210;QD=17.92;ReadPosRankSum=-2.028;VQSLOD=2.3781;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:46:90.27:0,90,2520	1/1:4,3:7:6.02:127,6,0	0/0:18,0:12:8.24:0,8,189	0/0:27,0:11:7.71:0,8,88	0/0:21,0:21:36.55:0,37,808	0/0:17,0:22:43.76:0,44,1279	0/0:16,0:18:27.09:0,27,786	1/1:13,12:25:32.75:449,33,0	0/0:14,0:17:27.03:0,27,543	0/0:21,0:26:48.14:0,48,1231	0/0:13,0:12:24.08:0,24,750	0/0:9,0:9:18.06:0,18,523	0/0:4,0:7:12.04:0,12,337	0/0:12,0:12:30.10:0,30,894	0/0:12,0:15:23.39:0,23,673	0/0:16,0:16:42.13:0,42,1267	0/0:28,0:28:62.89:0,63,1661	0/0:16,0:18:41.97:0,42,1054	1/1:13,10:24:26.56:350,27,0	1/1:6,14:20:29.95:502,30,0	1/1:3,7:11:9.03:140,9,0	0/0:19,0:22:39.11:0,39,1026	0/0:12,0:13:20.95:0,21,385	0/0:22,0:22:48.16:0,48,1489	0/0:5,0:6:9.03:0,9,299	0/0:35,0:38:81.24:0,81,1956	1/1:10,13:23:29.68:581,30,0	0/0:4,0:3:3:0,3,25
chr10	106833845	.	AT	A	652.73	PASS	AC=10;AF=0.217;AN=46;BaseQRankSum=-0.579;DP=214;FS=1.303;HRun=10;HaplotypeScore=59.1753;InbreedingCoeff=0.7989;MQ=53.01;MQ0=26;MQRankSum=-0.596;QD=15.92;ReadPosRankSum=-0.497;VQSLOD=3.7454;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:27.06:0,27,290	1/1:0,3:3:9:78,9,0	./.	0/0:9,0:4:0:0,0,0	0/0:12,0:11:24.06:0,24,265	0/0:9,0:9:18.05:0,18,199	0/0:4,0:3:6.02:0,6,66	1/1:4,7:7:21:182,21,0	0/0:3,0:3:9.02:0,9,100	0/0:12,0:12:24.06:0,24,265	0/0:10,0:10:21.06:0,21,232	0/0:7,0:7:18.05:0,18,199	0/0:2,0:1:3.01:0,3,33	0/0:2,0:2:6.02:0,6,66	0/0:3,0:3:6.02:0,6,66	./.	0/0:30,0:16:48.13:0,48,531	0/0:11,0:9:18.05:0,18,199	1/1:2,5:5:15:130,15,0	1/1:1,5:6:12:104,12,0	./.	./.	0/0:6,0:4:12.03:0,12,133	./.	0/0:9,0:6:21.04:0,21,219	0/0:11,0:11:24.06:0,24,265	1/1:2,12:14:35.98:312,36,0	0/0:9,0:6:12.03:0,12,133
chr10	106835706	.	A	AG	4930.22	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-7.589;DP=490;FS=3.747;HRun=0;HaplotypeScore=53.6357;InbreedingCoeff=0.9947;MQ=80.87;MQ0=0;MQRankSum=-0.351;QD=45.23;ReadPosRankSum=-0.482;VQSLOD=4.8211;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.25:0,90,1218	1/1:0,5:5:15.05:240,15,0	0/0:12,0:12:36.11:0,36,473	0/0:14,0:14:29.75:0,30,416	0/0:13,0:13:39.13:0,39,527	0/0:28,0:28:81.27:0,81,1133	0/0:22,0:22:63.21:0,63,881	1/1:1,20:21:63.20:974,63,0	0/0:13,0:13:39.13:0,39,542	0/0:17,0:17:48.16:0,48,672	0/0:15,0:15:39.13:0,39,532	0/0:16,0:16:48.16:0,48,671	0/0:7,0:7:21.07:0,21,294	0/0:19,0:19:54.18:0,54,755	0/0:18,0:18:54.18:0,54,755	0/0:22,0:22:63.20:0,63,863	0/0:26,0:26:75.25:0,75,1049	0/0:13,0:13:39.10:0,39,524	1/1:1,18:19:54.16:837,54,0	1/1:1,12:13:38.80:585,39,0	1/1:0,30:30:84.29:1343,84,0	0/0:9,0:9:24.08:0,24,336	0/0:9,0:9:27.09:0,27,377	0/0:35,0:35:99:0,105,1443	0/0:8,0:8:24.08:0,24,334	0/0:16,0:16:48.14:0,48,638	1/1:0,20:20:60.20:952,60,0	0/0:18,0:18:54.13:0,54,702
chr10	106836486	.	G	GTT	3055.86	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-6.384;DP=596;FS=5.439;HRun=10;HaplotypeScore=84.2180;InbreedingCoeff=0.9941;MQ=82.68;MQ0=1;MQRankSum=-1.647;QD=25.68;ReadPosRankSum=-1.701;VQSLOD=3.2999;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:38:59.20:0,59,754	1/1:2,8:10:18.06:268,18,0	0/0:30,0:23:27.07:0,27,244	0/0:33,0:29:52.85:0,53,454	0/0:22,0:22:60.08:0,60,588	0/0:22,0:22:49.30:0,49,491	0/0:19,0:20:56.83:0,57,552	1/1:9,9:20:35.09:465,35,0	0/0:15,0:15:33.03:0,33,335	0/0:19,0:21:35.72:0,36,412	0/0:19,0:19:48.06:0,48,486	0/0:13,0:13:36.07:0,36,365	0/0:17,0:17:51.12:0,51,519	0/0:23,0:23:60.11:0,60,603	0/0:25,0:26:68.86:0,69,683	0/0:19,0:19:39.03:0,39,389	0/0:23,0:24:62.83:0,63,613	0/0:18,0:18:45.05:0,45,447	1/1:8,13:22:14.65:556,15,0	1/1:5,11:20:40.55:487,41,0	1/1:2,20:23:57.19:851,57,0	0/0:17,0:17:48.07:0,48,482	0/0:17,0:18:26.69:0,27,320	0/0:15,0:15:29.99:0,30,294	0/0:14,0:15:38.80:0,39,378	0/0:27,0:29:54.89:0,55,725	1/1:4,16:23:47.09:617,47,0	0/0:21,0:22:65.89:0,66,653
chr10	106836710	.	AAAGAAG	A	1309.51	PASS	AB=0.947;AC=33;AF=0.750;AN=44;BaseQRankSum=-3.290;DP=498;FS=2.266;HRun=0;HaplotypeScore=113.1726;InbreedingCoeff=0.2514;MQ=54.57;MQ0=16;MQRankSum=-2.706;QD=4.59;ReadPosRankSum=-1.325;VQSLOD=2.1730;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,4:22:5.98:79,6,0	1/1:8,0:8:4.44:13,4,0	./.	./.	0/0:12,0:14:5.95:0,6,53	1/1:9,0:13:2.22:7,2,0	./.	./.	1/1:12,5:19:9.03:142,9,0	0/1:13,0:11:46.81:47,0,78	1/1:6,1:8:2.97:20,3,0	1/1:9,0:11:3.01:42,3,0	1/1:16,0:17:9.03:137,9,0	1/1:11,5:16:3.01:59,3,0	1/1:9,8:17:5.81:117,6,0	1/1:13,4:17:3.01:59,3,0	1/1:17,1:17:3.01:59,3,0	1/1:23,0:24:9.03:136,9,0	./.	0/0:29,0:28:4.34:0,4,210	./.	0/0:15,0:15:8.89:0,9,62	1/1:7,0:8:3.01:41,3,0	0/0:10,0:19:9.30:0,9,55	0/1:13,1:15:21.56:91,0,22	1/1:13,3:16:9.03:139,9,0	0/1:30,0:29:24.10:24,0,153	1/1:5,5:9:12.04:235,12,0
chr10	106836725	.	G	GAA	2752.07	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=8.588;DP=465;FS=3.606;HRun=2;HaplotypeScore=79.4091;InbreedingCoeff=0.8256;MQ=53.75;MQ0=11;MQRankSum=-9.726;QD=25.02;ReadPosRankSum=2.264;VQSLOD=2.6625;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:57.16:0,57,769	1/1:6,0:6:17.92:202,18,0	0/0:15,0:2:2.63:0,3,41	0/0:14,0:5:12.04:0,12,150	0/0:18,0:17:45.15:0,45,628	0/0:14,0:14:33.06:0,33,407	0/0:18,0:14:36.12:0,36,507	1/1:26,1:19:53.29:733,53,0	0/0:17,0:17:39.03:0,39,490	0/0:23,0:23:63.19:0,63,837	0/0:9,0:7:18.06:0,18,255	0/0:9,0:9:21.03:0,21,276	0/0:15,0:15:42.09:0,42,550	0/0:12,0:12:23.97:0,24,295	0/0:15,0:15:26.75:0,27,344	0/0:14,0:14:33.09:0,33,448	0/0:16,0:15:42.12:0,42,558	0/0:24,0:24:57.04:0,57,703	0/1:12,0:12:96.90:204,0,97	1/1:20,5:24:64.25:823,64,0	1/1:7,0:6:9.01:106,9,0	0/0:16,0:16:45.12:0,45,593	0/0:11,0:11:25.44:0,25,339	0/0:23,0:23:39.07:0,39,479	0/0:17,0:17:48.13:0,48,629	0/0:14,0:14:42.11:0,42,549	1/1:30,1:31:40.47:857,40,0	0/0:13,0:12:27:0,27,301
chr10	106836727	.	AG	A	3063.01	PASS	AB=0.800;AC=11;AF=0.196;AN=56;BaseQRankSum=9.586;DP=468;FS=3.520;HRun=1;HaplotypeScore=70.4992;InbreedingCoeff=0.8263;MQ=53.89;MQ0=11;MQRankSum=-9.756;QD=27.85;ReadPosRankSum=2.770;VQSLOD=3.6108;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:61.39:0,61,806	1/1:0,6:6:18.06:244,18,0	0/0:16,0:2:2.63:0,3,41	0/0:14,0:5:12.04:0,12,150	0/0:18,0:17:48.11:0,48,622	0/0:15,0:15:36.09:0,36,472	0/0:18,0:14:39.13:0,39,549	1/1:4,23:19:54.12:735,54,0	0/0:18,0:18:34.81:0,35,457	0/0:23,0:23:63.11:0,63,809	0/0:9,0:7:21.07:0,21,294	0/0:9,0:9:21.07:0,21,297	0/0:15,0:15:39.38:0,39,510	0/0:13,0:13:25.31:0,25,327	0/0:15,0:15:26.88:0,27,347	0/0:14,0:14:31.35:0,31,429	0/0:15,0:14:40.37:0,40,534	0/0:24,0:24:57.51:0,58,731	0/1:9,3:11:95.87:212,0,96	1/1:7,18:24:66.13:837,66,0	1/1:2,5:6:9.03:114,9,0	0/0:16,0:16:43.57:0,44,569	0/0:11,0:11:27.01:0,27,370	0/0:23,0:23:39.33:0,39,471	0/0:17,0:17:46.50:0,46,566	0/0:15,0:15:44.07:0,44,525	1/1:8,25:32:50.62:1095,51,0	0/0:13,0:12:23.03:0,23,248
chr10	106836730	.	AG	A	940.71	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=10.791;DP=463;FS=0.538;HRun=1;HaplotypeScore=77.7652;InbreedingCoeff=0.7717;MQ=53.04;MQ0=11;MQRankSum=-10.141;QD=8.55;ReadPosRankSum=2.586;VQSLOD=1.1861;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:58.44:0,58,812	1/1:6,0:6:10.20:56,10,0	0/0:13,1:2:1.66:0,2,39	0/0:11,0:4:9.03:0,9,119	0/0:19,0:18:51.12:0,51,667	0/0:15,0:15:36.11:0,36,489	0/0:17,0:13:36.11:0,36,493	1/1:27,0:19:31.86:244,32,0	0/0:18,0:18:34.75:0,35,457	0/0:22,0:22:60.10:0,60,768	0/0:9,0:7:21.07:0,21,295	0/0:10,0:10:24.07:0,24,323	0/0:16,0:16:42.38:0,42,534	0/0:13,0:13:25.33:0,25,344	0/0:15,0:15:26.56:0,27,331	0/0:14,0:14:31.32:0,31,395	0/0:14,0:13:37.36:0,37,493	0/0:23,0:23:54.58:0,55,732	0/1:11,0:10:98.86:132,0,99	1/1:24,1:24:21.73:260,22,0	1/1:7,0:6:4.18:34,4,0	0/0:16,0:16:43.57:0,44,569	0/0:12,0:12:30.02:0,30,412	0/0:23,0:23:39.33:0,39,471	0/0:19,0:19:55.49:0,55,655	0/0:13,0:13:38.07:0,38,474	1/1:31,3:33:8.86:377,9,0	0/0:14,0:13:26.02:0,26,274
chr10	106836742	.	AG	A	723.96	PASS	AB=0.966;AC=7;AF=0.130;AN=54;BaseQRankSum=8.756;DP=462;FS=22.727;HRun=1;HaplotypeScore=80.4297;InbreedingCoeff=0.1208;MQ=50.46;MQ0=11;MQRankSum=-8.446;QD=6.70;ReadPosRankSum=2.481;VQSLOD=-0.7191;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:70.48:0,70,981	0/1:7,0:7:45.51:62,0,46	0/0:6,0:1:3.01:0,3,42	./.	0/0:18,0:17:48.11:0,48,626	0/0:19,0:19:48.14:0,48,659	0/0:15,0:12:30.10:0,30,425	0/1:25,1:17:99:145,0,201	0/0:18,0:18:31.82:0,32,430	0/0:22,0:21:57.08:0,57,724	0/0:11,0:9:27.06:0,27,345	0/0:13,0:13:33.11:0,33,469	0/0:17,0:17:45.40:0,45,595	0/0:15,0:15:31.33:0,31,412	0/0:13,0:13:20.55:0,21,263	0/0:13,0:13:28.30:0,28,348	0/0:13,0:12:34.35:0,34,446	0/0:25,0:25:63.51:0,64,833	0/1:15,1:15:28.07:28,0,191	0/1:20,1:20:48.67:271,0,49	1/1:6,0:6:7.82:63,8,0	0/0:20,0:20:55.59:0,56,720	0/0:13,0:13:36.11:0,36,499	0/0:20,0:20:33.32:0,33,404	0/0:18,0:18:52.50:0,53,634	0/0:14,0:14:41.08:0,41,515	0/1:31,1:32:99:285,0,181	0/0:16,0:15:32.07:0,32,398
chr10	106836745	.	AG	A	1661.58	PASS	AB=0.839;AC=10;AF=0.185;AN=54;BaseQRankSum=11.614;DP=456;FS=4.160;HRun=1;HaplotypeScore=75.5130;InbreedingCoeff=0.7223;MQ=50.64;MQ0=13;MQRankSum=-8.101;QD=16.95;ReadPosRankSum=1.529;VQSLOD=4.0425;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:79.44:0,79,1053	1/1:2,3:7:17.78:171,18,0	0/0:7,0:3:8.96:0,9,102	./.	0/0:18,0:16:45.11:0,45,602	0/0:20,0:20:51.16:0,51,702	0/0:15,0:12:33.10:0,33,449	0/1:11,10:14:46.02:260,0,46	0/0:17,0:17:31.82:0,32,430	0/0:21,0:20:54.07:0,54,682	0/0:11,0:9:27.08:0,27,362	0/0:14,0:14:36.09:0,36,476	0/0:18,0:18:48.33:0,48,595	0/0:14,0:14:28.32:0,28,369	0/0:14,0:14:20.55:0,21,263	0/0:10,0:10:19.31:0,19,260	0/0:14,0:13:34.35:0,34,443	0/0:26,0:26:66.54:0,67,862	0/1:11,0:11:28.20:28,0,32	1/1:9,7:20:47.32:502,47,0	1/1:5,1:6:9.03:105,9,0	0/0:19,0:19:52.60:0,53,696	0/0:14,0:14:39.11:0,39,524	0/0:20,0:20:36.33:0,36,439	0/0:17,0:17:49.51:0,50,609	0/0:14,0:14:41.03:0,41,493	1/1:9,13:31:78.75:758,79,0	0/0:16,0:15:35.08:0,35,438
chr10	106836748	.	AG	A	2075.73	PASS	AB=0.642;AC=9;AF=0.167;AN=54;BaseQRankSum=10.156;DP=466;FS=0.494;HRun=1;HaplotypeScore=73.7724;InbreedingCoeff=0.6265;MQ=50.88;MQ0=12;MQRankSum=-7.887;QD=21.18;ReadPosRankSum=1.168;VQSLOD=3.7530;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:79.48:0,79,1080	1/1:5,2:7:20.96:220,21,0	0/0:8,0:4:10.28:0,10,130	./.	0/0:18,0:17:48.11:0,48,627	0/0:19,0:19:48.16:0,48,678	0/0:17,0:14:36.10:0,36,493	0/1:14,8:15:33.03:380,0,33	0/0:18,0:18:31.80:0,32,410	0/0:23,0:22:60.08:0,60,736	0/0:11,0:9:27.09:0,27,380	0/0:13,0:13:33.11:0,33,469	0/0:17,0:17:45.40:0,45,593	0/0:14,0:14:28.31:0,28,352	0/0:16,0:16:23.55:0,24,288	0/0:10,0:10:19.31:0,19,260	0/0:15,0:14:37.34:0,37,469	0/0:27,0:27:66.59:0,67,883	0/1:1,9:10:18.29:268,0,18	1/1:19,2:20:21.09:431,21,0	0/1:3,3:6:5.38:91,0,5	0/0:19,0:19:52.58:0,53,678	0/0:14,0:14:39.11:0,39,525	0/0:20,0:20:39.53:0,40,468	0/0:17,0:17:49.51:0,50,609	0/0:14,0:14:41.08:0,41,502	1/1:25,7:31:48.62:841,49,0	0/0:18,0:17:41.07:0,41,502
chr10	106836823	.	T	TCCTCCTCCTCCCCCCTCCC	3074.30	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=2.567;DP=598;FS=0.000;HRun=0;HaplotypeScore=273.1945;InbreedingCoeff=0.8455;MQ=64.69;MQ0=3;MQRankSum=-6.131;QD=30.74;ReadPosRankSum=-4.271;VQSLOD=1.6795;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:75.25:0,75,3052	1/1:5,4:11:12.04:607,12,0	0/0:24,0:16:20.96:0,21,544	0/0:25,0:21:39.13:0,39,1285	0/0:25,0:25:63.20:0,63,2627	0/0:28,0:28:81.10:0,81,2767	0/0:30,0:30:75.24:0,75,3036	1/1:25,0:20:19.98:210,20,0	0/0:23,0:23:63.20:0,63,2664	0/0:29,0:29:78.24:0,78,2975	0/0:23,0:23:54.16:0,54,2363	0/0:14,0:14:39.10:0,39,1473	0/0:24,0:24:69.24:0,69,2714	0/0:17,0:17:42.06:0,42,1913	0/0:21,0:21:54.10:0,54,2230	0/0:28,0:28:72.22:0,72,3071	0/1:13,0:13:23.59:24,0,1377	0/0:25,0:25:63.22:0,63,2396	1/1:19,0:18:48.10:1239,48,0	1/1:4,0:9:6.02:173,6,0	1/1:6,0:7:6.01:67,6,0	0/0:15,0:15:42.14:0,42,1693	0/0:18,0:18:48.16:0,48,2214	0/0:35,0:35:96.25:0,96,4158	0/0:17,0:17:42.12:0,42,1681	0/0:23,0:23:60.19:0,60,2020	1/1:8,5:15:15.52:932,16,0	0/0:21,0:21:51.17:0,51,1720
chr10	106841248	.	GTT	G	1016.95	PASS	AB=0.500;AC=11;AF=0.196;AN=56;BaseQRankSum=5.589;DP=413;FS=0.553;HRun=14;HaplotypeScore=56.1005;InbreedingCoeff=0.7875;MQ=68.17;MQ0=2;MQRankSum=0.986;QD=13.21;ReadPosRankSum=3.730;VQSLOD=2.2247;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:35:80.06:0,80,874	0/1:0,1:4:6.52:29,0,7	0/0:16,0:7:0.51:0,1,4	0/0:16,0:10:10.42:0,10,66	0/0:14,1:16:7.82:0,8,371	0/0:18,1:19:23.34:0,23,551	0/0:18,1:21:19.36:0,19,536	1/1:7,8:16:16.83:175,17,0	0/0:4,0:4:9.03:0,9,126	0/0:10,0:13:32.83:0,33,367	0/0:8,0:9:17.52:0,18,184	0/0:6,0:6:18.03:0,18,206	0/0:4,0:6:17.42:0,17,205	0/0:9,0:10:26.53:0,27,289	0/0:13,0:14:38.58:0,39,451	0/0:9,0:9:24.06:0,24,304	0/0:24,0:29:76.08:0,76,839	0/0:12,0:16:41.05:0,41,442	1/1:3,9:15:6.83:195,7,0	1/1:1,9:10:17.79:156,18,0	1/1:4,6:10:11.93:103,12,0	0/0:12,0:17:32.97:0,33,370	0/0:9,1:12:26.50:0,26,277	0/0:16,0:17:45.48:0,45,549	0/0:12,1:15:7.77:0,8,335	0/0:17,0:20:49.51:0,50,483	1/1:3,19:22:57:527,57,0	0/0:13,0:15:23.05:0,23,257
chr10	106843462	.	T	TATCC	2903.53	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-6.438;DP=591;FS=8.079;HRun=0;HaplotypeScore=89.8225;InbreedingCoeff=0.7857;MQ=64.67;MQ0=11;MQRankSum=-0.227;QD=20.45;ReadPosRankSum=-1.098;VQSLOD=2.5072;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:66.21:0,66,990	1/1:4,5:9:6.02:142,6,0	0/0:25,0:10:2.99:0,3,24	0/0:30,0:17:11.31:0,11,148	0/0:26,0:26:51.14:0,51,738	0/0:17,0:17:39.12:0,39,580	0/0:17,0:17:27.07:0,27,387	0/1:34,0:34:24.90:219,0,25	0/0:19,0:19:36.11:0,36,533	0/0:22,0:21:30.09:0,30,449	0/0:17,0:18:39.13:0,39,577	0/0:17,0:17:33.11:0,33,511	0/0:11,0:11:21.07:0,21,327	0/0:21,0:21:51.16:0,51,774	0/0:18,0:19:51.14:0,51,724	0/0:12,0:12:12.03:0,12,163	0/0:20,0:20:39.09:0,39,560	0/0:21,0:21:29.51:0,30,418	1/1:15,5:21:24.01:434,24,0	1/1:5,7:12:12.04:219,12,0	1/1:6,16:22:33.11:783,33,0	0/0:18,0:18:39.13:0,39,600	0/0:15,0:15:18.06:0,18,266	0/0:23,0:23:45.15:0,45,697	0/0:24,0:24:48.16:0,48,739	0/0:32,0:32:57.16:0,57,841	1/1:17,26:44:54.19:1277,54,0	0/0:4,0:5:6.01:0,6,75
chr10	106845370	.	C	CG	4560.87	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-8.487;DP=581;FS=7.769;HRun=0;HaplotypeScore=82.9077;InbreedingCoeff=0.9921;MQ=76.69;MQ0=1;MQRankSum=-1.855;QD=37.38;ReadPosRankSum=-0.475;VQSLOD=4.2933;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:74.96:0,75,1009	1/1:0,10:10:17.96:285,18,0	0/0:21,0:20:57.19:0,57,785	0/0:29,0:28:79.14:0,79,1066	0/0:18,0:18:30.10:0,30,417	0/0:22,0:22:33.11:0,33,460	0/0:19,0:19:42.13:0,42,572	1/1:1,12:13:39.06:575,39,0	0/0:25,0:25:60.13:0,60,813	0/0:20,0:20:51.15:0,51,683	0/0:11,0:11:18.06:0,18,250	0/0:17,0:17:36.11:0,36,488	0/0:14,0:14:24.08:0,24,335	0/0:18,0:18:42.14:0,42,585	0/0:17,0:17:27.09:0,27,377	0/0:17,0:17:42.14:0,42,586	0/0:33,0:33:90.27:0,90,1235	0/0:24,0:24:57.15:0,57,775	1/1:1,14:15:36.03:509,36,0	1/1:4,10:14:33.11:523,33,0	1/1:1,54:54:99:2143,135,0	0/0:12,0:12:24.07:0,24,318	0/0:16,0:16:33.06:0,33,437	0/0:28,0:28:69.23:0,69,963	0/0:22,0:22:51.11:0,51,677	0/0:19,0:19:45.14:0,45,609	1/1:0,15:15:33.11:525,33,0	0/0:5,0:5:15.05:0,15,210
chr10	106846174	.	G	GT	5087.46	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-13.216;DP=669;FS=1.175;HRun=3;HaplotypeScore=58.6196;InbreedingCoeff=0.9983;MQ=85.55;MQ0=0;MQRankSum=-1.512;QD=38.54;ReadPosRankSum=-1.314;VQSLOD=4.5459;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.23:0,75,897	1/1:0,6:6:18.06:252,18,0	0/0:21,0:21:57.15:0,57,661	0/0:22,0:22:63.19:0,63,751	0/0:19,0:19:54.16:0,54,647	0/0:25,0:25:66.20:0,66,792	0/0:13,0:13:39.12:0,39,468	1/1:2,26:28:78.24:1059,78,0	0/0:28,0:28:84.26:0,84,1008	0/0:37,0:37:99:0,108,1264	0/0:26,0:26:78.22:0,78,922	0/0:24,0:24:72.22:0,72,864	0/0:26,0:26:72.21:0,72,852	0/0:20,0:20:54.17:0,54,648	0/0:29,0:29:81.22:0,81,949	0/0:26,0:26:78.23:0,78,923	0/0:22,0:22:63.19:0,63,756	0/0:29,0:28:78.24:0,78,936	1/1:0,22:22:66.22:924,66,0	1/1:1,33:34:90.13:1172,90,0	1/1:1,14:15:42.14:588,42,0	0/0:28,0:28:78.24:0,78,935	0/0:30,0:30:78.22:0,78,923	0/0:15,0:15:45.14:0,45,540	0/0:21,0:21:57.17:0,57,683	0/0:32,0:32:90.26:0,90,1061	1/1:0,27:27:78.26:1092,78,0	0/0:19,0:19:51.16:0,51,612
chr10	106847008	.	CATTTAAT	C	6062.47	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.999;DP=578;FS=4.518;HRun=0;HaplotypeScore=141.4858;InbreedingCoeff=0.9913;MQ=73.44;MQ0=0;MQRankSum=-11.743;QD=51.82;ReadPosRankSum=-1.416;VQSLOD=4.6224;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.28:0,81,3200	1/1:1,6:7:18.06:466,18,0	0/0:16,0:16:39.13:0,39,1257	0/0:16,0:16:24.12:0,24,1036	0/0:21,0:20:60.21:0,60,2303	0/0:36,0:36:99:0,108,4194	0/0:21,0:21:63.22:0,63,2377	1/1:9,22:31:56.90:967,57,0	0/0:19,0:19:48.16:0,48,1897	0/0:37,0:37:99:0,111,4216	0/0:17,0:17:51.17:0,51,1877	0/0:24,0:24:72.24:0,72,2685	0/0:18,0:18:54.18:0,54,1896	0/0:18,0:18:51.16:0,51,1944	0/0:25,0:25:72.25:0,72,2763	0/0:10,0:10:30.09:0,30,1105	0/0:24,0:24:72.25:0,72,2719	0/0:22,0:22:66.23:0,66,2548	1/1:3,29:32:81.26:1969,81,0	1/1:1,14:15:33.04:795,33,0	1/1:2,8:10:12.04:311,12,0	0/0:18,0:18:51.16:0,51,1758	0/0:21,0:21:60.20:0,60,2309	0/0:16,0:16:48.16:0,48,1918	0/0:15,0:15:45.15:0,45,1678	0/0:30,0:30:90.31:0,90,3374	1/1:0,22:22:60.21:1555,60,0	0/0:9,0:9:27.09:0,27,1080
chr10	106850530	.	G	GGCATCCCT	7427.85	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=2.358;DP=620;FS=7.056;HRun=0;HaplotypeScore=166.3358;InbreedingCoeff=0.9717;MQ=84.50;MQ0=0;MQRankSum=-11.026;QD=58.03;ReadPosRankSum=-4.320;VQSLOD=3.0187;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,102,2606	1/1:4,8:13:15.05:632,15,0	0/0:23,0:23:42.11:0,42,1009	0/0:19,0:19:42.11:0,42,957	0/0:18,0:18:39.05:0,39,913	0/0:19,0:19:51.16:0,51,1277	0/0:29,0:29:75.21:0,75,1818	1/1:15,14:31:63.18:1996,63,0	0/0:16,0:16:48.12:0,48,1227	0/0:17,0:16:39.07:0,39,869	0/0:20,0:20:45.14:0,45,1147	0/0:24,0:24:69.13:0,69,1613	0/0:16,0:16:48.12:0,48,1227	0/0:24,0:24:60.16:0,60,1544	0/0:22,0:22:57.20:0,57,1527	0/0:12,0:12:33.11:0,33,886	0/0:34,0:33:93.28:0,93,2379	0/0:23,0:23:60.19:0,60,1554	1/1:6,14:22:51.11:1602,51,0	1/1:2,2:4:6.02:256,6,0	1/1:16,12:28:15.05:618,15,0	0/0:22,0:22:57.20:0,57,1507	0/0:19,0:19:48.15:0,48,1215	0/0:44,0:44:99:0,123,3111	0/0:11,0:11:30.01:0,30,628	0/0:25,0:25:63.22:0,63,1690	1/1:8,22:30:59.73:2326,60,0	0/0:16,0:16:45.15:0,45,1207
chr10	106850988	.	A	ACGGGTG	2304.92	PASS	AB=0.533;AC=11;AF=0.196;AN=56;BaseQRankSum=1.878;DP=502;FS=23.566;HRun=0;HaplotypeScore=108.9866;InbreedingCoeff=0.9233;MQ=66.21;MQ0=1;MQRankSum=-7.956;QD=33.40;ReadPosRankSum=-4.387;VQSLOD=1.1955;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,3112	1/1:0,2:2:6.02:219,6,0	0/0:19,0:17:35.25:0,35,858	0/0:17,0:15:29.66:0,30,602	0/0:17,0:17:48.15:0,48,1132	0/0:21,0:21:60.19:0,60,1428	0/0:30,0:30:90.27:0,90,2065	1/1:6,6:16:33.06:883,33,0	0/0:16,0:16:48.16:0,48,1182	0/0:19,0:19:57.20:0,57,1402	0/0:15,0:15:45.14:0,45,1059	0/0:10,0:10:30.09:0,30,690	0/0:17,0:17:51.18:0,51,1256	0/0:16,0:16:48.15:0,48,1133	0/0:16,0:16:42.13:0,42,985	0/0:15,0:15:42.14:0,42,1032	0/0:34,0:34:99:0,99,2353	0/0:30,0:30:90.21:0,90,2010	1/1:3,3:8:21.07:618,21,0	0/1:1,3:8:0:0,0,0	1/1:3,14:28:11.27:201,11,0	0/0:11,0:11:27.08:0,27,616	0/0:13,0:13:39.12:0,39,911	0/0:24,0:24:69.24:0,69,1669	0/0:18,0:18:54.19:0,54,1304	0/0:24,0:24:72.24:0,72,1705	1/1:1,5:7:15.05:547,15,0	0/0:6,0:6:18.06:0,18,443
chr10	106851932	.	T	TC	5691.84	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.709;DP=809;FS=2.497;HRun=1;HaplotypeScore=98.8251;InbreedingCoeff=0.9989;MQ=53.63;MQ0=2;MQRankSum=-1.369;QD=36.49;ReadPosRankSum=-1.442;VQSLOD=4.4530;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,138,1789	1/1:0,13:13:36.12:538,36,0	0/0:29,0:20:51.16:0,51,648	0/0:31,0:21:43.68:0,44,561	0/0:18,0:18:45.08:0,45,561	0/0:20,0:20:45.15:0,45,583	0/0:28,0:28:81.26:0,81,1051	1/1:6,25:31:78.19:1071,78,0	0/0:40,0:40:99:0,108,1386	0/0:39,0:39:99:0,117,1469	0/0:12,0:12:30.09:0,30,377	0/0:32,0:32:90.28:0,90,1151	0/0:32,0:32:93.28:0,93,1185	0/0:40,0:40:99:0,108,1371	0/0:35,0:34:90.23:0,90,1096	0/0:30,0:30:87.28:0,87,1128	0/0:37,0:37:99:0,99,1234	0/0:29,0:29:81.24:0,81,1034	1/1:2,10:10:30.10:449,30,0	1/1:0,22:22:57.19:850,57,0	1/1:2,55:57:99:2031,138,0	0/0:33,0:33:87.28:0,87,1115	0/0:21,0:21:54.18:0,54,699	0/0:43,0:43:99:0,114,1435	0/0:21,0:21:60.20:0,60,777	0/0:26,0:26:75.24:0,75,960	1/1:2,19:21:51.17:753,51,0	0/0:8,0:8:21.07:0,21,272
chr10	106852591	.	C	CTGTG	1551.77	PASS	AB=0.922;AC=28;AF=0.636;AN=44;BaseQRankSum=-0.760;DP=470;FS=2.609;HRun=0;HaplotypeScore=91.8375;InbreedingCoeff=0.3760;MQ=62.66;MQ0=20;MQRankSum=-0.312;QD=5.28;ReadPosRankSum=-0.548;VQSLOD=2.0733;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:28:20.38:200,20,0	0/1:5,0:5:0:0,0,0	./.	./.	1/1:20,0:20:12.92:178,13,0	0/0:17,0:16:4.15:0,4,16	0/0:15,0:14:3.48:0,3,37	./.	1/1:10,0:10:8.75:102,9,0	1/1:17,0:17:3.77:29,4,0	0/0:11,0:11:3.48:0,3,33	1/1:14,0:14:8.76:124,9,0	./.	1/1:8,6:17:11.25:217,11,0	0/1:16,0:16:19.20:89,0,19	0/0:14,0:14:9.29:0,9,113	1/1:29,0:28:11.92:75,12,0	0/1:15,5:23:32.46:64,0,32	1/1:25,0:24:1.55:4,2,0	./.	1/1:31,0:28:8.95:68,9,0	1/1:8,0:7:8.49:85,8,0	./.	0/1:32,1:34:4.89:369,0,5	1/1:9,0:9:3.01:70,3,0	0/0:11,0:9:5.68:0,6,29	0/0:7,0:6:6:0,6,54	1/1:5,0:5:2.95:19,3,0
chr10	106852627	.	GTGTGTGTGTGTGTA	G	654.70	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-0.396;DP=478;FS=1.412;HRun=0;HaplotypeScore=133.1963;InbreedingCoeff=0.4424;MQ=47.41;MQ0=46;MQRankSum=-0.725;QD=3.26;ReadPosRankSum=-5.033;VQSLOD=0.9854;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:26:9.51:10,0,1324	1/1:6,0:6:5.99:48,6,0	0/1:27,0:6:11.80:12,0,21	0/1:38,0:4:5.98:18,0,6	0/0:15,0:15:21.05:0,21,848	0/0:17,0:16:36.08:0,36,1540	0/0:20,0:19:10.08:0,10,619	1/1:11,0:6:0.16:32,0,0	0/1:8,0:8:6.86:7,0,487	0/0:21,0:20:17.56:0,18,1515	0/0:9,0:9:21.06:0,21,928	0/0:13,0:12:24.04:0,24,956	0/0:5,0:5:8.99:0,9,200	0/0:27,0:26:32.83:0,33,1191	0/1:17,0:17:10.89:11,0,655	0/0:13,0:13:30.10:0,30,1217	0/0:27,0:26:34.27:0,34,1191	0/0:22,0:22:16.02:0,16,1170	1/1:13,0:10:10.63:67,11,0	1/1:9,0:9:11.83:83,12,0	1/1:27,0:23:32.91:297,33,0	0/0:10,0:8:1.93:0,2,498	0/0:6,0:5:5.99:0,6,49	0/0:33,0:31:21.52:0,22,2506	0/0:13,0:11:11.68:0,12,501	0/0:15,0:11:32.88:0,33,808	1/1:4,13:14:6.01:242,6,0	0/0:11,0:8:4.73:0,5,715
chr10	106852759	.	C	CTG	5228.80	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.002;DP=499;FS=6.027;HRun=0;HaplotypeScore=71.1733;InbreedingCoeff=0.9875;MQ=76.17;MQ0=0;MQRankSum=-2.642;QD=45.87;ReadPosRankSum=0.288;VQSLOD=5.8121;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.25:0,75,1104	1/1:1,11:12:27.09:503,27,0	0/0:11,0:11:30.10:0,30,438	0/0:19,0:19:51.17:0,51,724	0/0:13,0:13:30.10:0,30,441	0/0:13,0:13:36.12:0,36,530	0/0:32,0:32:93.31:0,93,1367	1/1:1,12:11:33.11:610,33,0	0/0:21,0:21:63.20:0,63,907	0/0:23,0:23:63.21:0,63,927	0/0:10,0:10:24.08:0,24,353	0/0:10,0:10:24.08:0,24,353	0/0:5,0:5:15.05:0,15,221	0/0:19,0:19:54.18:0,54,795	0/0:17,0:17:45.15:0,45,657	0/0:14,0:14:39.13:0,39,574	0/0:37,0:36:99:0,111,1633	0/0:27,0:27:75.25:0,75,1103	1/1:3,9:12:30.09:531,30,0	1/1:0,13:13:39.13:731,39,0	1/1:6,35:40:93.32:1741,93,0	0/0:17,0:17:45.15:0,45,661	0/0:6,0:6:12.04:0,12,177	0/0:29,0:29:87.29:0,87,1281	0/0:13,0:13:39.13:0,39,574	0/0:15,0:15:45.15:0,45,662	1/1:6,17:21:63.19:1113,63,0	0/0:6,0:6:18.06:0,18,265
chr10	106852841	.	C	CG	3549.81	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=3.529;DP=490;FS=0.000;HRun=5;HaplotypeScore=54.9146;InbreedingCoeff=0.9940;MQ=64.39;MQ0=1;MQRankSum=-1.756;QD=31.98;ReadPosRankSum=0.203;VQSLOD=3.9585;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.22:0,93,990	1/1:2,7:9:21.07:276,21,0	0/0:22,0:18:48.06:0,48,486	0/0:16,0:16:45.10:0,45,469	0/0:12,0:12:33.08:0,33,354	0/0:13,0:13:39.10:0,39,419	0/0:25,0:25:69.17:0,69,740	1/1:2,17:19:48.16:629,48,0	0/0:18,0:18:48.05:0,48,491	0/0:19,0:19:51.12:0,51,542	0/0:14,0:13:39.10:0,39,419	0/0:17,0:17:45.08:0,45,472	0/0:7,0:7:21.05:0,21,226	0/0:12,0:12:33.08:0,33,354	0/0:13,0:13:27.07:0,27,290	0/0:17,0:17:42.10:0,42,451	0/0:25,0:25:72.18:0,72,773	0/0:25,0:25:60.11:0,60,633	1/1:2,15:17:45.15:592,45,0	1/1:0,20:20:57.19:750,57,0	1/1:6,19:24:21.97:639,22,0	0/0:17,0:17:39.05:0,39,406	0/0:14,0:14:42.11:0,42,451	0/0:27,0:27:75.19:0,75,806	0/0:12,0:12:32.88:0,33,324	0/0:17,0:17:42.08:0,42,442	1/1:3,18:20:51.16:664,51,0	0/0:5,0:5:15.04:0,15,161
chr10	106853148	.	AAGAG	A	4141.36	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.332;DP=553;FS=4.830;HRun=0;HaplotypeScore=94.7859;InbreedingCoeff=0.9906;MQ=70.46;MQ0=0;MQRankSum=-6.737;QD=45.01;ReadPosRankSum=-0.922;VQSLOD=3.8042;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.29:0,84,2227	1/1:1,5:6:15.05:267,15,0	0/0:22,0:17:37.50:0,37,883	0/0:30,0:25:16.55:0,17,743	0/0:23,0:23:63.19:0,63,1592	0/0:15,0:15:45.15:0,45,1206	0/0:16,0:16:39.11:0,39,920	1/1:1,27:28:78.24:1393,78,0	0/0:17,0:17:48.16:0,48,1261	0/0:32,0:31:84.29:0,84,2157	0/0:16,0:16:48.16:0,48,1244	0/0:13,0:13:39.13:0,39,1034	0/0:11,0:11:33.08:0,33,757	0/0:16,0:16:45.15:0,45,1196	0/0:21,0:21:60.21:0,60,1584	0/0:21,0:21:60.21:0,60,1597	0/0:30,0:30:90.27:0,90,2252	0/0:22,0:22:66.20:0,66,1652	1/1:2,21:23:60.19:1054,60,0	1/1:1,13:14:39.13:733,39,0	1/1:1,11:12:24.04:411,24,0	0/0:36,0:35:99:0,99,2537	0/0:20,0:20:57.18:0,57,1415	0/0:17,0:17:51.18:0,51,1353	0/0:13,0:13:33.11:0,33,864	0/0:30,0:30:90.31:0,90,2325	1/1:0,9:8:15.05:283,15,0	0/0:11,0:11:33.11:0,33,882
chr10	106853326	.	CTG	C	330.10	PASS	AB=0.993;AC=9;AF=0.161;AN=56;BaseQRankSum=3.268;DP=940;FS=14.697;HRun=0;HaplotypeScore=120.6698;InbreedingCoeff=0.4724;MQ=48.22;MQ0=53;MQRankSum=-1.534;QD=2.43;ReadPosRankSum=-1.413;VQSLOD=1.5280;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:45:98.99:0,99,1553	1/1:4,0:4:9.01:96,9,0	0/0:67,0:11:7.16:0,7,51	0/0:85,0:16:2.65:0,3,204	0/0:30,0:30:63.21:0,63,1006	0/0:27,1:28:28.05:0,28,1005	0/0:29,1:29:57.13:0,57,914	0/1:45,1:40:99:116,0,250	0/0:42,0:42:99:0,104,1556	0/0:48,0:46:99:0,102,1587	0/1:20,0:19:31.19:31,0,589	0/0:29,1:30:40.04:0,40,1145	0/0:35,1:34:52.08:0,52,1337	0/0:27,0:26:63.16:0,63,970	0/0:35,0:34:43.03:0,43,1205	0/0:35,0:35:92.80:0,93,1492	0/0:37,2:39:51.46:0,51,1305	0/0:22,1:23:16.43:0,16,756	0/1:21,0:12:52.59:53,0,190	0/0:9,7:14:0:0,0,0	1/1:33,0:28:14.94:139,15,0	0/0:36,1:37:63.20:0,63,1014	0/0:26,0:26:19.18:0,19,800	0/0:38,1:39:81.28:0,81,1327	0/0:24,0:24:54.13:0,54,816	0/0:37,0:34:51.65:0,52,1257	1/1:3,9:11:3.01:38,3,0	0/0:21,0:20:43.96:0,44,687
chr10	106853338	.	G	GTC	992.92	PASS	AB=0.656;AC=5;AF=0.093;AN=54;BaseQRankSum=0.989;DP=916;FS=92.990;HRun=0;HaplotypeScore=117.8927;InbreedingCoeff=0.6382;MQ=48.28;MQ0=65;MQRankSum=-8.721;QD=13.60;ReadPosRankSum=-2.825;VQSLOD=-0.4035;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:45:99:0,105,1296	0/0:3,1:4:4.20:0,4,22	0/0:64,0:5:8.95:0,9,68	0/0:83,0:12:22.53:0,23,165	0/0:27,0:27:66.09:0,66,787	0/0:26,0:26:69.17:0,69,924	0/0:29,0:28:69.02:0,69,779	0/1:20,21:36:21.87:822,0,22	0/0:41,0:41:99:0,105,1303	0/0:41,0:38:99:0,102,1158	0/0:16,0:16:48.02:0,48,551	0/0:38,0:37:93.12:0,93,1096	0/0:33,0:31:87.14:0,87,1113	0/0:28,0:27:58.26:0,58,732	0/0:37,0:36:99:0,102,1152	0/0:36,0:36:99:0,99,1336	0/0:40,0:40:99:0,112,1341	0/0:27,0:27:56.59:0,57,753	1/1:18,2:10:18.77:221,19,0	./.	0/0:21,2:19:8.36:0,8,43	0/0:34,0:34:72.11:0,72,893	0/0:28,0:28:66.10:0,66,788	0/0:44,0:43:99:0,99,1260	0/0:23,0:23:48.06:0,48,583	0/0:37,0:34:93.15:0,93,1147	1/1:10,1:10:5.83:68,6,0	0/0:20,0:19:56.94:0,57,588
chr10	106853372	.	GTC	G	633.49	PASS	AB=0.710;AC=7;AF=0.135;AN=52;BaseQRankSum=7.025;DP=818;FS=31.768;HRun=0;HaplotypeScore=98.7733;InbreedingCoeff=0.7024;MQ=50.60;MQ0=36;MQRankSum=-8.393;QD=6.89;ReadPosRankSum=-1.814;VQSLOD=1.3507;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,120,1906	./.	1/1:50,0:3:1.55:4,2,0	0/0:75,1:9:5.95:0,6,142	0/0:22,0:22:57:0,57,881	0/0:30,0:30:74.88:0,75,1135	0/0:32,0:31:52.20:0,52,1147	0/1:13,9:18:5.98:463,0,6	0/0:37,0:37:89.92:0,90,1274	0/0:26,0:24:69.22:0,69,1160	0/0:17,0:17:39.10:0,39,628	0/0:44,0:43:99:0,117,1914	0/0:30,0:30:66.77:0,67,1091	0/0:18,0:17:41.92:0,42,673	0/0:40,0:40:99:0,114,1841	0/0:34,0:34:93.29:0,93,1625	0/0:45,0:45:99:0,116,1972	0/0:31,0:31:64.43:0,64,1198	1/1:7,8:9:18.03:234,18,0	./.	0/0:17,3:15:0:0,0,0	0/0:32,0:32:72.08:0,72,1090	0/0:25,0:25:54.11:0,54,846	0/0:50,0:49:99:0,126,2076	0/0:19,0:19:45.15:0,45,811	0/0:33,0:31:72.12:0,72,1147	1/1:2,1:3:5.61:51,6,0	0/0:11,0:11:33.05:0,33,536
chr10	106853768	.	GTGTGTGTGTC	G	228.01	PASS	AB=0.932;AC=5;AF=0.089;AN=56;BaseQRankSum=4.004;DP=971;FS=35.119;HRun=0;HaplotypeScore=214.6838;InbreedingCoeff=0.2910;MQ=45.14;MQ0=109;MQRankSum=-4.001;QD=3.35;ReadPosRankSum=-3.310;VQSLOD=0.5007;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:44:82.97:0,83,2364	1/1:8,0:4:0.47:1,0,0	0/0:43,0:5:8.16:0,8,121	0/0:53,0:4:6.02:0,6,74	0/0:18,0:14:9.03:0,9,249	0/0:29,0:28:63.21:0,63,1999	0/0:61,0:54:63.18:0,63,2554	0/1:26,9:15:99:206,0,132	0/0:33,0:27:45.12:0,45,1106	0/0:45,0:24:63.66:0,64,1361	0/0:21,0:16:24.07:0,24,540	0/0:44,0:39:81.27:0,81,2438	0/0:27,0:24:60.67:0,61,1617	0/0:43,0:39:66.86:0,67,1987	0/0:43,0:40:84.28:0,84,2298	0/0:36,0:32:60.20:0,60,1625	0/0:63,0:59:99:0,156,4825	0/0:49,0:42:99:0,108,3222	0/1:17,0:6:28.65:110,0,29	0/0:10,0:8:2.13:0,2,5	0/0:38,0:23:0.34:0,0,1	0/0:28,0:25:27.07:0,27,479	0/0:16,0:12:18.06:0,18,376	0/0:77,0:73:99:0,161,4497	0/0:25,0:19:22.63:0,23,537	0/0:46,0:36:93.25:0,93,2192	0/1:8,0:6:0.17:0,0,0	0/0:4,0:3:6.02:0,6,249
chr10	106853814	.	GTATGCGTGTGTGTC	G	453.95	PASS	AB=0.985;AC=6;AF=0.111;AN=54;BaseQRankSum=6.455;DP=929;FS=0.737;HRun=0;HaplotypeScore=286.5391;InbreedingCoeff=0.2359;MQ=48.61;MQ0=52;MQRankSum=-5.714;QD=4.24;ReadPosRankSum=-4.480;VQSLOD=1.3566;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:67.71:0,68,2828	1/1:10,0:6:2.97:20,3,0	0/0:53,0:9:16.47:0,16,412	0/0:45,0:4:12.04:0,12,249	0/0:17,0:17:24:0,24,747	0/0:28,0:27:6.12:0,6,1839	0/0:61,0:57:99:0,102,3534	0/1:21,0:13:57.80:58,0,538	0/0:30,0:26:68.94:0,69,2138	0/0:38,0:28:84.24:0,84,2411	0/0:18,0:17:39.13:0,39,1220	0/0:54,0:52:99:0,113,3858	0/0:34,0:34:23.25:0,23,2138	0/0:45,0:44:54.91:0,55,3193	0/0:42,0:41:99:0,102,3535	0/0:28,0:28:63.11:0,63,1910	0/0:61,0:60:99:0,163,4738	0/0:38,0:38:87.11:0,87,3287	0/1:18,0:10:99:245,0,131	./.	0/1:43,0:38:72.42:107,0,72	0/0:24,0:24:39.13:0,39,1400	0/0:17,0:14:33.11:0,33,984	0/0:63,0:62:99:0,151,4681	0/0:20,0:20:44.97:0,45,1135	0/0:39,0:36:99:0,105,2764	0/1:12,0:10:2.39:143,0,2	0/0:9,0:9:24.05:0,24,593
chr10	106853828	.	CTG	C	555.55	PASS	AB=0.918;AC=18;AF=0.346;AN=52;BaseQRankSum=5.780;DP=905;FS=0.000;HRun=0;HaplotypeScore=130.1101;InbreedingCoeff=-0.2995;MQ=49.46;MQ0=43;MQRankSum=0.089;QD=1.10;ReadPosRankSum=2.497;VQSLOD=2.3670;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:47,5:48:65.84:66,0,953	1/1:10,0:7:0.16:0,0,0	0/1:45,0:10:12.93:24,0,13	0/0:41,0:4:3.01:0,3,41	0/1:17,2:19:42.34:42,0,384	0/1:27,2:27:25.16:25,0,508	0/0:61,1:61:10.43:0,10,1334	./.	0/1:30,2:30:11.24:11,0,774	0/1:36,3:31:33.79:34,0,841	0/1:15,2:18:43.58:44,0,281	0/1:50,4:50:99:111,0,1245	0/1:28,4:32:99:108,0,726	0/1:38,1:40:13.60:14,0,972	0/0:44,2:45:16.39:0,16,1107	0/0:24,5:29:18.82:0,19,714	0/0:43,4:46:22.66:0,23,1235	0/1:32,4:36:68.64:69,0,841	1/1:17,0:10:6.64:33,7,0	./.	0/0:51,0:45:7.68:0,8,82	0/0:24,1:25:9.82:0,10,602	0/1:15,3:17:34.54:35,0,423	0/0:61,2:62:34.15:0,34,1613	0/1:20,2:23:42.72:43,0,428	0/1:35,3:35:48.82:49,0,669	0/0:12,0:11:13.26:0,13,95	0/0:7,0:7:18.06:0,18,284
chr10	106854733	.	CCATCAT	C	439.43	PASS	AB=0.936;AC=8;AF=0.143;AN=56;BaseQRankSum=8.059;DP=908;FS=6.101;HRun=0;HaplotypeScore=153.5461;InbreedingCoeff=0.3542;MQ=52.98;MQ0=52;MQRankSum=-5.154;QD=2.50;ReadPosRankSum=-3.373;VQSLOD=1.4802;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:44:91.19:0,91,1938	1/1:10,0:10:3.26:27,3,0	0/0:51,0:10:16.77:0,17,172	0/0:52,0:11:9.17:0,9,160	0/0:27,0:22:59.86:0,60,1027	0/0:27,0:27:66.13:0,66,1579	0/0:47,0:46:99:0,120,1965	0/1:27,14:33:99:174,0,113	0/0:39,0:39:99:0,111,2225	0/0:25,0:24:68.97:0,69,1457	0/0:13,0:13:32.76:0,33,534	0/0:37,0:37:96.09:0,96,2144	0/0:38,0:38:99:0,108,2548	0/0:35,0:35:90.09:0,90,2018	0/0:47,0:47:99:0,135,2955	0/0:24,0:24:69.17:0,69,1708	0/0:40,0:40:99:0,113,2672	0/0:31,0:31:63.46:0,63,1496	0/1:22,0:11:14.73:76,0,15	0/1:17,0:15:11.09:112,0,11	0/1:56,0:53:43.84:50,0,44	0/0:23,0:22:63.02:0,63,1128	0/0:23,0:22:62.93:0,63,971	0/0:42,0:42:99:0,120,2764	0/0:19,0:18:48.03:0,48,924	0/0:39,0:34:93.16:0,93,1821	1/1:30,0:30:21.31:139,21,0	0/0:4,0:4:12:0,12,256
chr10	106854745	.	C	CCATCAT	1249.84	PASS	AB=0.889;AC=8;AF=0.143;AN=56;BaseQRankSum=6.028;DP=919;FS=10.423;HRun=0;HaplotypeScore=157.4019;InbreedingCoeff=0.6154;MQ=52.79;MQ0=44;MQRankSum=-6.091;QD=10.16;ReadPosRankSum=-1.638;VQSLOD=1.7826;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:45:89.80:0,90,1718	1/1:2,7:9:5.93:113,6,0	0/0:47,0:8:18.72:0,19,148	0/0:51,0:9:17.95:0,18,155	0/0:26,0:24:66.08:0,66,1101	0/0:24,0:24:61.03:0,61,1198	0/0:45,0:44:99:0,123,1976	0/1:44,0:36:89.93:90,0,283	0/0:38,0:38:99:0,112,1920	0/0:28,0:27:75.21:0,75,1404	0/0:14,0:14:36.05:0,36,595	0/0:35,0:35:99:0,102,1809	0/0:41,0:41:99:0,120,2134	0/0:33,0:33:99:0,99,1745	0/0:45,0:45:99:0,126,2364	0/0:24,0:24:72.20:0,72,1476	0/0:45,0:45:99:0,114,2079	0/0:29,0:29:63.09:0,63,1286	0/1:15,4:11:32.61:361,0,33	1/1:18,0:16:9.90:201,10,0	0/0:11,46:62:3.99:0,4,40	0/0:25,0:25:66.09:0,66,1126	0/0:21,0:19:50.84:0,51,756	0/0:49,0:49:99:0,144,2638	0/0:21,0:20:60.14:0,60,1122	0/0:36,0:33:87.12:0,87,1431	1/1:1,29:31:20.80:627,21,0	0/0:5,0:5:15.03:0,15,297
chr10	106855084	.	A	ATGAGGCCAG	6714.99	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-5.106;DP=561;FS=11.919;HRun=0;HaplotypeScore=154.3985;InbreedingCoeff=0.9730;MQ=74.58;MQ0=0;MQRankSum=-10.726;QD=101.74;ReadPosRankSum=-0.619;VQSLOD=4.6262;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,4117	1/1:3,6:10:26.85:1246,27,0	0/0:13,0:13:39.12:0,39,1113	0/0:10,0:10:24.04:0,24,525	0/0:19,0:19:57.20:0,57,1771	0/0:24,0:24:72.25:0,72,2191	0/0:32,0:32:96.33:0,96,2843	1/1:2,3:6:15.05:653,15,0	0/0:24,0:24:69.22:0,69,2171	0/0:18,0:18:54.19:0,54,1686	0/0:12,0:12:36.11:0,36,1095	0/0:25,0:25:75.26:0,75,2312	0/0:14,0:14:42.14:0,42,1370	0/0:27,0:27:78.27:0,78,2430	0/0:26,0:26:78.27:0,78,2510	0/0:21,0:21:63.22:0,63,2054	0/0:43,0:43:99:0,129,4015	0/0:31,0:31:90.29:0,90,2745	1/1:2,8:12:27.07:1148,27,0	1/1:6,10:17:26.32:1058,26,0	1/1:3,10:14:36.12:1702,36,0	0/0:18,0:18:54.18:0,54,1702	0/0:19,0:19:54.19:0,54,1711	0/0:27,0:27:81.28:0,81,2549	0/0:24,0:24:72.25:0,72,2286	0/0:17,0:17:51.17:0,51,1532	1/1:1,6:7:18.06:909,18,0	0/0:4,0:4:6.02:0,6,142
chr10	106855208	.	CCTTCTA	C	3416.43	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.796;DP=521;FS=9.614;HRun=0;HaplotypeScore=124.7826;InbreedingCoeff=0.9536;MQ=78.35;MQ0=0;MQRankSum=-10.283;QD=44.95;ReadPosRankSum=-1.156;VQSLOD=2.8419;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.23:0,66,2136	1/1:2,4:6:12.04:273,12,0	0/0:23,0:21:44.12:0,44,1250	0/0:33,0:28:50.16:0,50,1248	0/0:20,0:20:57.20:0,57,1901	0/0:28,0:28:81.28:0,81,2702	0/0:12,0:12:36.11:0,36,1038	1/1:2,11:13:30.09:589,30,0	0/0:13,0:13:33.11:0,33,1067	0/0:25,0:25:72.22:0,72,2308	0/0:18,0:18:54.19:0,54,1769	0/0:11,0:11:33.04:0,33,955	0/0:11,0:11:33.11:0,33,1094	0/0:13,0:13:36.12:0,36,1197	0/0:17,0:17:48.16:0,48,1613	0/0:23,0:23:63.22:0,63,2105	0/0:27,0:27:78.24:0,78,2407	0/0:29,0:29:81.28:0,81,2595	1/1:6,4:10:15.05:310,15,0	1/1:8,22:30:66.21:1453,66,0	1/1:1,2:3:3.01:68,3,0	0/0:14,0:14:36.12:0,36,1153	0/0:14,0:14:36.12:0,36,1191	0/0:23,0:23:66.23:0,66,1976	0/0:22,0:22:66.23:0,66,2176	0/0:32,0:32:87.30:0,87,2866	1/1:3,11:14:33.11:723,33,0	0/0:14,0:14:42.14:0,42,1398
chr10	106855248	.	GTTTT	G	1048.52	PASS	AB=0.829;AC=9;AF=0.161;AN=56;BaseQRankSum=7.324;DP=537;FS=8.719;HRun=11;HaplotypeScore=119.2643;InbreedingCoeff=0.7630;MQ=63.61;MQ0=5;MQRankSum=-5.620;QD=10.81;ReadPosRankSum=0.175;VQSLOD=0.2598;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:19:54.03:0,54,1043	1/1:5,5:10:13.53:183,14,0	0/0:10,0:6:7.99:0,8,95	0/0:15,0:10:11.20:0,11,192	0/0:24,0:26:78.19:0,78,1410	0/0:27,0:28:72.05:0,72,1179	0/0:12,0:12:30.09:0,30,613	1/1:29,0:29:48.46:360,48,0	0/0:14,0:14:39.07:0,39,756	0/0:28,0:29:84.17:0,84,1425	0/0:23,0:26:56.75:0,57,1032	0/0:9,0:10:27:0,27,504	0/0:12,0:12:33.07:0,33,677	0/0:17,0:18:42.01:0,42,808	0/0:13,0:14:33.10:0,33,728	0/0:13,0:14:39.13:0,39,904	0/0:32,0:35:85.22:0,85,1887	0/0:31,0:34:84.14:0,84,1296	1/1:14,3:15:13.38:221,13,0	0/1:23,6:29:6.94:313,0,7	0/0:3,0:3:0.47:0,0,1	0/0:11,0:13:39.12:0,39,816	0/0:16,0:16:39.10:0,39,649	0/0:19,0:17:38.76:0,39,714	0/0:32,0:33:87.25:0,87,1827	0/0:26,0:27:69.19:0,69,1318	1/1:9,3:12:1.09:121,1,0	0/0:13,0:13:33.07:0,33,676
chr10	106855272	.	GTTTGTTTTTTTGTT	G	4087.36	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.691;DP=515;FS=20.431;HRun=0;HaplotypeScore=203.6359;InbreedingCoeff=0.9055;MQ=51.79;MQ0=14;MQRankSum=-10.149;QD=43.02;ReadPosRankSum=-2.119;VQSLOD=1.7440;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.18:0,57,2484	1/1:3,5:7:18.06:588,18,0	0/0:10,0:3:2.51:0,3,76	0/0:7,0:3:8.82:0,9,146	0/0:24,0:24:72.18:0,72,3490	0/0:22,0:22:60.20:0,60,2539	0/0:12,0:12:36.04:0,36,1254	1/1:18,0:15:30.91:285,31,0	0/0:17,0:17:48.07:0,48,1976	0/0:25,0:24:60.19:0,60,2609	0/0:26,0:26:63.05:0,63,2914	0/0:12,0:12:33.10:0,33,1155	0/0:10,0:10:30.10:0,30,1538	0/0:16,0:16:48.16:0,48,1872	0/0:15,0:15:45.15:0,45,2239	0/0:17,0:17:48.15:0,48,1894	0/0:40,0:41:99:0,117,5352	0/0:26,0:26:66.05:0,66,2773	1/1:17,3:15:43.89:948,44,0	1/1:24,6:29:25.41:1330,25,0	0/0:3,0:3:2.37:0,2,8	0/0:14,0:14:42.14:0,42,1792	0/0:15,0:15:42.14:0,42,2248	0/0:22,0:19:56.68:0,57,2164	0/0:29,0:29:87.28:0,87,4704	0/0:27,0:26:72.25:0,72,2741	1/1:15,3:17:29.11:936,29,0	0/0:9,0:9:24.08:0,24,1368
chr10	106855276	.	GT	G	351.65	PASS	AB=0.853;AC=5;AF=0.093;AN=54;BaseQRankSum=9.289;DP=517;FS=6.708;HRun=7;HaplotypeScore=88.1523;InbreedingCoeff=-0.1119;MQ=51.55;MQ0=14;MQRankSum=-8.631;QD=3.41;ReadPosRankSum=1.759;VQSLOD=-0.3536;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.16:0,54,663	0/1:7,2:8:22.15:31,0,22	0/0:8,0:3:3.01:0,3,37	0/0:7,0:3:6.01:0,6,67	0/0:24,0:24:72.23:0,72,893	0/0:20,0:20:60.18:0,60,739	0/0:13,0:13:30.10:0,30,375	0/1:17,2:14:39.82:40,0,67	0/0:16,0:16:45.12:0,45,549	0/0:24,0:23:57.18:0,57,709	0/0:24,0:24:63.20:0,63,788	0/0:12,0:12:33.09:0,33,394	0/0:10,0:10:30.09:0,30,373	0/0:17,0:17:47.93:0,48,556	0/0:16,0:16:48.13:0,48,577	0/0:17,0:17:42.13:0,42,525	0/0:40,0:41:99:0,102,1320	0/0:27,0:27:60.13:0,60,716	0/1:19,3:16:99:99,0,103	0/1:23,11:33:99:272,0,125	./.	0/0:14,0:14:36.11:0,36,444	0/0:14,0:14:42.13:0,42,518	0/0:22,0:19:48.13:0,48,586	0/0:29,0:29:81.25:0,81,1006	0/0:26,0:25:70.44:0,70,836	0/1:17,2:17:25.86:26,0,155	0/0:10,0:10:24.08:0,24,302
chr10	106855284	.	GTT	G	1596.14	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.097;DP=514;FS=30.403;HRun=9;HaplotypeScore=88.1501;InbreedingCoeff=0.9132;MQ=53.57;MQ0=13;MQRankSum=-9.930;QD=15.80;ReadPosRankSum=-2.314;VQSLOD=-0.3518;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.16:0,54,829	1/1:8,1:8:5.26:125,5,0	0/0:11,0:5:9.03:0,9,147	0/0:8,0:4:8.77:0,9,110	0/0:25,0:25:64.10:0,64,1001	0/0:21,0:21:54.18:0,54,859	0/0:13,0:13:36.12:0,36,581	1/1:6,13:14:23.92:268,24,0	0/0:16,0:16:45.12:0,45,692	0/0:22,0:21:57.17:0,57,880	0/0:24,0:24:60.19:0,60,935	0/0:10,0:11:33.04:0,33,460	0/0:11,0:11:27.08:0,27,420	0/0:17,0:17:45.14:0,45,704	0/0:16,0:16:48.15:0,48,761	0/0:15,0:15:39.09:0,39,565	0/0:38,0:38:82.15:0,82,1533	0/0:25,0:25:63.20:0,63,981	1/1:11,8:17:29.73:318,30,0	1/1:13,10:29:71.20:606,71,0	1/1:1,4:5:2.99:27,3,0	0/0:14,0:14:36.11:0,36,543	0/0:15,0:16:48.15:0,48,733	0/0:23,0:20:54.18:0,54,874	0/0:27,0:27:81.27:0,81,1304	0/0:28,0:27:69.18:0,69,1003	1/1:4,11:15:43.69:427,44,0	0/0:12,0:11:30.09:0,30,463
chr10	106855538	.	GT	G	2462.38	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.609;DP=551;FS=0.417;HRun=8;HaplotypeScore=59.7712;InbreedingCoeff=0.9766;MQ=69.06;MQ0=0;MQRankSum=-1.525;QD=20.87;ReadPosRankSum=-1.423;VQSLOD=3.0516;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:38:99:0,99,1159	1/1:2,2:4:6.01:58,6,0	0/0:27,0:26:26.84:0,27,479	0/0:19,0:14:24.05:0,24,277	0/0:19,0:19:35.29:0,35,564	0/0:17,0:17:42.12:0,42,498	0/0:22,0:22:60.18:0,60,723	1/1:3,20:23:57.08:544,57,0	0/0:15,0:15:33.10:0,33,399	0/0:24,0:24:69.20:0,69,816	0/0:17,0:17:45.14:0,45,543	0/0:14,0:14:39.12:0,39,470	0/0:13,0:13:36.11:0,36,432	0/0:18,0:18:51.15:0,51,605	0/0:22,0:22:63.19:0,63,761	0/0:12,0:12:30.09:0,30,362	0/0:22,0:22:62.82:0,63,716	0/0:22,0:22:34.70:0,35,596	1/1:6,20:25:60.07:569,60,0	1/1:1,20:21:51.07:490,51,0	1/1:2,11:13:30.05:290,30,0	0/0:16,0:16:45.14:0,45,543	0/0:23,0:23:33.65:0,34,584	0/0:21,0:20:51.12:0,51,580	0/0:18,0:18:51.15:0,51,607	0/0:26,0:26:72.21:0,72,860	1/1:7,24:31:72.11:695,72,0	0/0:7,0:7:21.06:0,21,254
chr10	106855848	.	G	GC	1121.93	PASS	AB=0.770;AC=10;AF=0.179;AN=56;BaseQRankSum=-6.071;DP=475;FS=1.243;HRun=10;HaplotypeScore=58.0819;InbreedingCoeff=0.5492;MQ=81.79;MQ0=1;MQRankSum=0.162;QD=9.05;ReadPosRankSum=-1.580;VQSLOD=1.7403;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:82.87:0,83,667	0/1:5,5:10:12.59:84,0,13	0/0:21,0:20:34.95:0,35,250	0/1:24,0:24:1:1,0,155	0/0:9,0:9:26.97:0,27,222	0/0:16,0:16:35.93:0,36,295	0/0:22,0:24:54.97:0,55,427	0/1:11,8:19:9.67:91,0,10	0/0:19,0:19:56.92:0,57,465	0/0:14,0:14:35.95:0,36,293	0/0:7,0:7:14.98:0,15,123	0/0:8,0:9:20.01:0,20,154	0/0:14,0:14:35.94:0,36,295	0/0:18,0:19:49.91:0,50,397	0/0:22,0:22:50.91:0,51,416	0/0:18,0:18:47.89:0,48,389	0/0:28,0:30:79.35:0,79,614	0/0:11,0:11:23.93:0,24,191	0/1:13,9:22:40.75:220,0,41	1/1:3,7:10:14.97:146,15,0	1/1:6,20:25:48.12:512,48,0	0/0:15,0:16:37.92:0,38,294	0/0:10,0:10:17.97:0,18,148	0/0:18,2:20:18.89:0,19,351	0/0:6,0:7:11.01:0,11,80	0/0:19,1:21:17.94:0,18,335	1/1:3,10:13:21.05:224,21,0	0/0:7,0:7:11.93:0,12,94
chr10	106856841	.	TA	T	3992.49	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.064;DP=668;FS=0.783;HRun=4;HaplotypeScore=72.3659;InbreedingCoeff=0.9981;MQ=82.51;MQ0=1;MQRankSum=0.761;QD=30.95;ReadPosRankSum=-1.976;VQSLOD=3.2483;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,1961	1/1:1,5:6:18.04:205,18,0	0/0:22,0:22:50.53:0,51,669	0/0:27,0:26:74.72:0,75,984	0/0:22,0:21:57.15:0,57,776	0/0:16,0:16:45.14:0,45,613	0/0:27,0:27:78.24:0,78,1072	1/1:2,23:25:66.19:781,66,0	0/0:24,0:24:69.23:0,69,963	0/0:28,0:28:78.25:0,78,1064	0/0:9,0:9:27.08:0,27,362	0/0:27,0:27:78.24:0,78,1074	0/0:22,0:22:63.21:0,63,882	0/0:21,0:21:54.18:0,54,755	0/0:34,0:34:99:0,102,1410	0/0:21,0:21:60.20:0,60,838	0/0:33,0:33:96.26:0,96,1283	0/0:30,0:30:84.28:0,84,1175	1/1:6,19:25:69.19:812,69,0	1/1:2,15:17:48.12:553,48,0	1/1:2,36:38:87.26:1043,87,0	0/0:17,0:17:39.12:0,39,530	0/0:17,0:17:51.13:0,51,660	0/0:28,0:28:75.24:0,75,1033	0/0:14,0:14:42.14:0,42,587	0/0:31,0:31:81.26:0,81,1116	1/1:1,17:18:51.14:598,51,0	0/0:20,0:20:60.19:0,60,823
chr10	106856897	.	G	GC	5700.11	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-7.106;DP=690;FS=7.016;HRun=1;HaplotypeScore=71.5730;InbreedingCoeff=0.9964;MQ=79.96;MQ0=0;MQRankSum=-5.282;QD=36.08;ReadPosRankSum=-4.306;VQSLOD=3.0180;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,132,1713	1/1:1,6:7:15.05:221,15,0	0/0:32,0:31:87.28:0,87,1127	0/0:25,0:24:66.03:0,66,818	0/0:14,0:14:39.07:0,39,483	0/0:10,0:10:27.09:0,27,351	0/0:27,0:27:81.26:0,81,1050	1/1:1,27:28:78.21:1104,78,0	0/0:25,0:25:75.21:0,75,938	0/0:25,0:25:72.23:0,72,919	0/0:15,0:15:39.13:0,39,506	0/0:27,0:27:75.24:0,75,973	0/0:24,0:24:69.22:0,69,894	0/0:34,0:34:93.30:0,93,1206	0/0:32,0:32:93.28:0,93,1178	0/0:30,0:30:84.22:0,84,1057	0/0:33,0:33:96.31:0,96,1245	0/0:21,0:21:57.18:0,57,740	1/1:1,23:24:72.23:1033,72,0	1/1:6,20:26:54.17:781,54,0	1/1:4,46:50:99:1567,108,0	0/0:15,0:15:44.95:0,45,539	0/0:12,0:12:30.57:0,31,390	0/0:25,0:25:72.22:0,72,921	0/0:13,0:13:36.12:0,36,466	0/0:29,0:29:81.26:0,81,1039	1/1:0,23:23:68.44:994,68,0	0/0:16,0:16:45.15:0,45,584
chr10	106857624	.	T	TCTC	2630.51	PASS	AB=0.830;AC=14;AF=0.250;AN=56;BaseQRankSum=2.757;DP=473;FS=10.163;HRun=0;HaplotypeScore=202.5747;InbreedingCoeff=-0.1370;MQ=49.70;MQ0=1;MQRankSum=-3.304;QD=11.05;ReadPosRankSum=-3.982;VQSLOD=1.7304;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:26:94.44:94,0,453	0/1:7,2:9:8.80:185,0,9	0/0:23,0:21:39.11:0,39,533	0/1:10,0:7:5.30:5,0,25	0/0:18,0:20:10.37:0,10,168	0/1:17,0:21:39.55:40,0,387	0/0:23,0:24:29.13:0,29,650	0/1:11,8:20:45.37:415,0,45	0/0:7,0:7:12.04:0,12,184	0/0:32,0:32:28.19:0,28,653	0/0:22,0:24:10.79:0,11,399	0/1:12,0:12:30.31:30,0,170	0/0:15,0:15:26.90:0,27,385	0/0:8,0:8:8.48:0,8,150	0/0:13,0:13:22.89:0,23,316	0/0:14,0:14:28.47:0,28,426	0/0:9,0:9:12:0,12,184	0/0:3,0:3:6.02:0,6,86	0/1:9,7:15:26.21:445,0,26	0/1:17,4:22:89.61:324,0,90	1/1:8,12:20:30.10:639,30,0	0/1:17,0:19:7.18:7,0,290	0/0:16,0:18:19.69:0,20,258	0/0:13,0:13:6.02:0,6,92	0/1:18,0:23:59:59,0,347	0/1:17,0:19:8.40:8,0,436	0/1:9,10:20:21.26:535,0,21	0/0:11,0:12:24:0,24,340
chr10	106873868	.	A	AC	3802.94	PASS	AB=0.780;AC=6;AF=0.107;AN=56;BaseQRankSum=8.780;DP=1031;FS=0.355;HRun=2;HaplotypeScore=147.7617;InbreedingCoeff=-0.1200;MQ=72.13;MQ0=0;MQRankSum=-1.679;QD=8.86;ReadPosRankSum=-0.106;VQSLOD=1.0094;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:99:0,114,1386	0/1:23,10:33:99:331,0,755	0/0:19,0:19:44.49:0,44,599	0/0:26,0:26:71.99:0,72,826	0/0:19,0:19:51.16:0,51,632	0/0:11,0:11:33.09:0,33,396	0/0:38,0:38:99:0,108,1326	0/1:53,26:78:99:816,0,1600	0/0:29,0:29:84.25:0,84,1026	0/0:29,0:29:84.26:0,84,1030	0/0:23,0:23:59.82:0,60,670	0/0:32,0:32:90.27:0,90,1105	0/0:29,0:29:81.22:0,81,985	0/0:30,0:30:81.25:0,81,998	0/0:31,0:31:84.25:0,84,1029	0/0:27,0:27:81.25:0,81,1004	0/0:40,0:40:99:0,114,1398	0/0:23,0:23:63.20:0,63,781	0/1:49,13:62:99:416,0,1325	0/1:41,13:54:99:384,0,1022	0/1:97,43:140:99:1216,0,2924	0/0:35,0:35:89.99:0,90,1029	0/0:20,0:20:54.17:0,54,668	0/0:35,0:34:96.24:0,96,1159	0/0:20,0:20:60.17:0,60,729	0/0:29,0:29:78.19:0,78,919	0/1:42,19:60:99:640,0,1327	0/0:17,0:17:42.13:0,42,519
chr10	106874154	.	AGCCCT	A	6717.06	PASS	AB=0.682;AC=6;AF=0.107;AN=56;BaseQRankSum=16.044;DP=798;FS=1.641;HRun=0;HaplotypeScore=160.9294;InbreedingCoeff=-0.1214;MQ=67.77;MQ0=0;MQRankSum=-15.888;QD=21.74;ReadPosRankSum=-1.617;VQSLOD=4.1154;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.32:0,93,2980	0/1:5,24:29:99:1361,0,309	0/0:15,0:15:45.15:0,45,1332	0/0:11,0:11:27.09:0,27,824	0/0:19,0:19:57.20:0,57,1830	0/0:18,0:18:54.17:0,54,1648	0/0:31,0:31:93.32:0,93,2984	0/1:26,15:41:99:623,0,2018	0/0:32,0:32:93.32:0,93,2912	0/0:26,0:26:75.26:0,75,2374	0/0:18,0:18:51.18:0,51,1582	0/0:22,0:22:66.21:0,66,2060	0/0:23,0:23:63.22:0,63,2018	0/0:29,0:29:87.30:0,87,2785	0/0:25,0:25:72.25:0,72,2327	0/0:20,0:20:57.20:0,57,1841	0/0:32,0:32:96.33:0,96,3092	0/0:42,0:42:99:0,117,3695	0/1:30,21:51:99:1144,0,2021	0/1:22,19:41:99:1004,0,1710	0/1:61,26:85:99:746,0,4877	0/0:18,0:18:54.19:0,54,1696	0/0:12,0:12:36.12:0,36,1097	0/0:28,0:28:84.27:0,84,2590	0/0:12,0:12:36.12:0,36,1163	0/0:21,0:21:60.21:0,60,1941	0/1:28,32:60:99:1839,0,2181	0/0:4,0:4:12.04:0,12,385
chr10	106874597	.	G	GCAGTGC	16794.98	PASS	AB=0.688;AC=6;AF=0.107;AN=56;BaseQRankSum=-8.692;DP=930;FS=19.825;HRun=0;HaplotypeScore=190.5910;InbreedingCoeff=-0.1201;MQ=67.98;MQ0=0;MQRankSum=-18.894;QD=42.95;ReadPosRankSum=-4.226;VQSLOD=2.6965;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,3430	0/1:14,13:30:99:1324,0,721	0/0:22,0:22:46.55:0,47,1315	0/0:14,0:13:33.11:0,33,747	0/0:26,0:26:75.26:0,75,1761	0/0:23,0:23:66.23:0,66,1568	0/0:26,0:26:72.23:0,72,1657	0/1:51,27:83:99:5042,0,1179	0/0:26,0:26:78.27:0,78,1846	0/0:23,0:23:66.18:0,66,1489	0/0:12,0:12:33.11:0,33,794	0/0:20,0:20:60.17:0,60,1344	0/0:33,0:33:93.26:0,93,2135	0/0:25,0:25:75.24:0,75,1755	0/0:10,0:10:30.09:0,30,652	0/0:32,0:32:93.31:0,93,2187	0/0:39,0:39:99:0,117,2761	0/0:31,0:31:87.30:0,87,2092	0/1:36,25:61:99:3177,0,1186	0/1:25,19:48:99:2026,0,1115	0/1:63,30:106:99:1967,0,3364	0/0:17,0:17:51.18:0,51,1224	0/0:15,0:15:39.13:0,39,899	0/0:33,0:33:93.32:0,93,2231	0/0:15,0:15:45.15:0,45,1059	0/0:35,0:35:99:0,99,2380	0/1:30,26:63:99:3259,0,1544	0/0:12,0:12:33.11:0,33,793
chr10	106875479	.	CTTG	C	1339.62	PASS	AB=0.791;AC=5;AF=0.089;AN=56;BaseQRankSum=11.943;DP=988;FS=18.541;HRun=0;HaplotypeScore=161.9529;InbreedingCoeff=-0.0985;MQ=75.72;MQ0=0;MQRankSum=-9.856;QD=5.15;ReadPosRankSum=-3.118;VQSLOD=1.0323;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,166,3601	0/1:14,9:23:99:282,0,735	0/0:23,0:23:58.95:0,59,1230	0/0:21,0:19:54.07:0,54,1087	0/0:22,0:22:66.17:0,66,1338	0/0:18,0:18:54.15:0,54,1113	0/0:34,0:34:99:0,99,2079	0/1:63,16:79:99:355,0,3527	0/0:22,0:22:63.20:0,63,1359	0/0:27,0:27:78.25:0,78,1649	0/0:14,0:14:39.07:0,39,814	0/0:21,0:21:60.21:0,60,1339	0/0:26,0:26:75.24:0,75,1629	0/0:36,0:36:99:0,102,2237	0/0:22,0:22:63.20:0,63,1364	0/0:12,0:12:33.11:0,33,736	0/0:45,0:45:99:0,126,2784	0/0:39,0:39:99:0,114,2373	0/1:33,14:47:99:333,0,1781	0/1:43,10:53:99:160,0,2263	0/0:142,13:155:97.79:0,98,8380	0/0:29,0:29:84.25:0,84,1702	0/0:9,0:9:24.08:0,24,535	0/0:30,0:30:84.28:0,84,1828	0/0:29,0:29:78.27:0,78,1721	0/0:32,0:32:90.30:0,90,1929	0/1:43,15:57:99:328,0,2643	0/0:7,0:7:18.06:0,18,402
chr10	106875765	.	TGCCTGC	T	4557.41	PASS	AB=0.785;AC=6;AF=0.107;AN=56;BaseQRankSum=14.355;DP=874;FS=2.558;HRun=0;HaplotypeScore=213.9606;InbreedingCoeff=-0.1223;MQ=73.45;MQ0=0;MQRankSum=-13.594;QD=13.06;ReadPosRankSum=0.377;VQSLOD=4.2995;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,132,4037	0/1:15,7:22:99:365,0,372	0/0:14,0:14:24.08:0,24,695	0/0:20,0:20:9.84:0,10,531	0/0:23,0:23:57.20:0,57,1876	0/0:25,0:25:60.21:0,60,1977	0/0:23,0:23:60.21:0,60,1975	0/1:59,16:75:99:888,0,2189	0/0:21,0:21:57.20:0,57,1930	0/0:18,0:18:45.15:0,45,1465	0/0:13,0:13:24.08:0,24,785	0/0:23,0:23:54.19:0,54,1731	0/0:31,0:31:90.31:0,90,2958	0/0:28,0:28:69.24:0,69,2318	0/0:10,0:10:27.09:0,27,883	0/0:14,0:14:39.13:0,39,1310	0/0:32,0:32:78.24:0,78,2411	0/0:32,0:32:90.31:0,90,2924	0/1:32,11:43:99:616,0,740	0/1:30,15:45:99:882,0,1829	0/1:78,21:99:99:696,0,3607	0/0:26,0:26:72.25:0,72,2286	0/0:12,0:12:36.12:0,36,1166	0/0:39,0:39:99:0,105,3478	0/0:25,0:25:66.23:0,66,2173	0/0:29,0:29:69.23:0,69,2145	0/1:44,21:65:99:1111,0,2551	0/0:15,0:15:39.13:0,39,1183
chr10	106876490	.	GTC	G	1126.71	PASS	AB=0.782;AC=3;AF=0.054;AN=56;BaseQRankSum=11.353;DP=1112;FS=50.225;HRun=0;HaplotypeScore=209.2327;InbreedingCoeff=-0.0567;MQ=64.14;MQ0=0;MQRankSum=-10.355;QD=6.63;ReadPosRankSum=-0.786;VQSLOD=0.9825;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,2400	0/0:15,4:19:34.80:0,35,887	0/0:25,0:24:25.10:0,25,914	0/0:43,0:37:90.35:0,90,1409	0/0:34,0:34:99:0,102,1976	0/0:27,0:27:81.28:0,81,1621	0/0:43,0:43:99:0,120,2362	0/1:58,19:77:99:573,0,2773	0/0:49,0:49:99:0,148,2964	0/0:44,0:44:99:0,132,2612	0/0:23,0:23:69.24:0,69,1365	0/0:35,0:35:99:0,105,2084	0/0:35,0:35:99:0,105,2101	0/0:45,0:45:99:0,135,2633	0/0:53,0:53:99:0,160,3056	0/0:45,0:45:99:0,135,2683	0/0:31,0:31:93.29:0,93,1780	0/0:26,1:27:71.90:0,72,1502	0/1:24,11:35:99:367,0,1069	0/0:25,9:34:55.39:0,55,1422	0/0:87,22:109:99:0,166,4528	0/0:31,0:31:90.10:0,90,1811	0/0:40,0:41:99:0,117,2294	0/0:29,0:29:78.27:0,78,1550	0/0:27,0:27:81.26:0,81,1527	0/0:35,0:35:99:0,105,2084	0/1:42,16:57:99:286,0,2160	0/0:15,0:14:45.15:0,45,914
chr10	106876725	.	C	CCTT	1031.72	PASS	AB=0.857;AC=4;AF=0.071;AN=56;BaseQRankSum=8.213;DP=927;FS=55.109;HRun=0;HaplotypeScore=136.9773;InbreedingCoeff=-0.0780;MQ=73.05;MQ0=0;MQRankSum=-8.302;QD=6.88;ReadPosRankSum=-2.078;VQSLOD=0.4704;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,148,2331	0/1:17,2:19:94.66:95,0,440	0/0:23,0:23:57.19:0,57,900	0/0:19,0:18:40.43:0,40,543	0/0:37,0:37:99:0,99,1570	0/0:28,0:28:84.29:0,84,1327	0/0:24,0:24:57.19:0,57,904	0/1:49,8:57:99:207,0,1503	0/0:38,0:38:99:0,108,1713	0/0:45,0:45:99:0,120,1882	0/0:21,0:21:60.20:0,60,952	0/0:38,0:38:99:0,102,1574	0/0:31,0:31:90.31:0,90,1427	0/0:45,0:45:99:0,126,1956	0/0:47,0:47:99:0,129,1997	0/0:31,0:31:81.27:0,81,1260	0/0:33,0:33:90.31:0,90,1427	0/0:21,0:21:60.19:0,60,929	0/1:23,2:25:82.91:83,0,618	0/0:26,2:28:12.92:0,13,1124	0/0:41,0:41:99:0,111,1760	0/0:29,0:29:81.27:0,81,1261	0/0:29,0:29:78.27:0,78,1237	0/0:38,0:38:99:0,111,1733	0/0:24,0:24:69.22:0,69,1067	0/0:42,0:42:99:0,117,1832	0/1:30,18:49:99:757,0,996	0/0:13,0:13:27.09:0,27,428
chr10	106877225	.	C	CCTT	1211.50	PASS	AB=0.775;AC=4;AF=0.071;AN=56;BaseQRankSum=8.999;DP=652;FS=2.449;HRun=0;HaplotypeScore=101.5816;InbreedingCoeff=-0.0855;MQ=75.36;MQ0=0;MQRankSum=-8.556;QD=10.18;ReadPosRankSum=-0.596;VQSLOD=2.9075;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:81.25:0,81,1372	0/1:6,9:15:99:300,0,202	0/0:23,0:22:66.07:0,66,1020	0/0:23,0:23:58.53:0,59,931	0/0:31,0:31:93.30:0,93,1606	0/0:23,0:23:66.21:0,66,1105	0/0:23,0:23:66.18:0,66,1068	0/1:33,4:37:99:146,0,1106	0/0:15,0:15:45.13:0,45,732	0/0:21,0:21:63.20:0,63,1061	0/0:10,0:10:27.56:0,28,472	0/0:25,0:25:72.25:0,72,1266	0/0:18,0:18:51.14:0,51,842	0/0:14,0:14:42.11:0,42,651	0/0:19,0:19:54.16:0,54,896	0/0:15,0:15:45.15:0,45,789	0/0:33,0:33:99:0,99,1648	0/0:27,0:27:81.17:0,81,1332	0/0:19,1:20:1.71:0,2,715	0/1:25,12:38:99:507,0,912	0/0:41,1:42:37.65:0,38,1677	0/0:18,0:18:54.15:0,54,864	0/0:21,0:21:60.19:0,60,1030	0/0:37,0:37:99:0,102,1715	0/0:14,0:14:42.13:0,42,709	0/0:22,0:22:63.22:0,63,1111	0/1:23,6:28:99:367,0,580	0/0:7,0:7:21.06:0,21,335
chr10	106877506	.	T	TAGAGGGGA	4880.91	PASS	AB=0.833;AC=6;AF=0.107;AN=56;BaseQRankSum=10.267;DP=756;FS=35.191;HRun=0;HaplotypeScore=201.7522;InbreedingCoeff=-0.1203;MQ=72.46;MQ0=0;MQRankSum=-11.123;QD=18.85;ReadPosRankSum=-3.884;VQSLOD=2.1342;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,3499	0/1:11,5:16:99:706,0,647	0/0:11,0:11:21.05:0,21,426	0/0:15,0:16:25.52:0,26,671	0/0:28,0:28:81.25:0,81,2164	0/0:28,0:28:81.28:0,81,2239	0/0:28,0:28:81.21:0,81,2012	0/1:63,4:66:99:1094,0,2121	0/0:20,0:20:60.19:0,60,1598	0/0:21,0:21:63.21:0,63,1665	0/0:15,0:15:39.13:0,39,1045	0/0:22,0:22:63.22:0,63,1763	0/0:16,0:16:48.16:0,48,1262	0/0:20,0:20:60.21:0,60,1609	0/0:21,0:21:61.09:0,61,1701	0/0:20,0:20:57.20:0,57,1608	0/0:35,0:35:99:0,99,2742	0/0:27,0:27:78.27:0,78,2151	0/1:27,5:32:99:320,0,1759	0/1:32,9:41:99:884,0,1974	0/1:57,11:69:99:944,0,3532	0/0:25,0:25:75.26:0,75,2098	0/0:21,0:21:63.22:0,63,1757	0/0:23,0:23:66.21:0,66,1832	0/0:22,0:22:63.13:0,63,1674	0/0:20,0:20:54.19:0,54,1459	0/1:23,10:33:99:934,0,1423	0/0:11,0:11:30.10:0,30,784
chr10	106878253	.	AATCT	A	5595.14	PASS	AB=0.794;AC=48;AF=0.960;AN=50;BaseQRankSum=-0.888;DP=423;FS=2.515;HRun=0;HaplotypeScore=76.1195;InbreedingCoeff=-0.0712;MQ=59.54;MQ0=3;MQRankSum=0.828;QD=14.42;ReadPosRankSum=2.500;VQSLOD=4.1656;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:32:11.04:61,11,0	1/1:4,2:6:6.02:93,6,0	./.	./.	1/1:7,16:22:39.13:604,39,0	1/1:6,8:14:18.06:279,18,0	1/1:5,6:11:12.04:186,12,0	1/1:33,0:32:10.71:70,11,0	1/1:4,7:11:15.05:232,15,0	1/1:11,2:13:9.02:118,9,0	1/1:10,7:17:21:297,21,0	1/1:7,6:13:9.03:139,9,0	1/1:5,4:9:15.05:232,15,0	1/1:4,5:9:6.02:93,6,0	1/1:5,7:12:18.06:279,18,0	1/1:7,6:13:15.05:232,15,0	1/1:9,0:20:9.01:84,9,0	0/1:15,0:18:43.63:44,0,48	0/1:12,7:19:34.42:279,0,34	1/1:6,12:18:27.09:417,27,0	1/1:7,4:11:9.03:139,9,0	./.	1/1:5,7:12:18.06:279,18,0	1/1:4,6:10:12.04:186,12,0	1/1:8,5:13:15.05:232,15,0	1/1:9,6:15:18.06:274,18,0	1/1:10,8:18:18.06:279,18,0	1/1:6,12:18:30.10:465,30,0
chr10	106880813	.	ACCCC	A	1165.09	PASS	AB=0.625;AC=13;AF=0.232;AN=56;BaseQRankSum=-3.939;DP=224;FS=33.376;HRun=13;HaplotypeScore=47.7312;InbreedingCoeff=0.5334;MQ=91.98;MQ0=0;MQRankSum=-0.707;QD=15.13;ReadPosRankSum=4.561;VQSLOD=-0.3680;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:5.97:0,6,68	1/1:0,3:3:9.03:132,9,0	0/0:12,0:10:3.39:0,3,199	0/0:20,0:18:21.43:0,21,283	0/0:1,0:1:3:0,3,26	0/0:4,0:4:0.89:0,1,2	0/0:10,0:11:21.35:0,21,197	1/1:11,5:16:10.21:138,10,0	0/0:5,0:5:6.24:0,6,78	0/0:4,0:4:3:0,3,27	0/0:7,0:7:0.47:0,0,1	0/0:9,0:9:24.03:0,24,384	0/0:6,0:6:12.04:0,12,225	0/0:5,0:5:9.02:0,9,124	0/0:1,0:1:3.01:0,3,38	0/0:9,0:9:12.03:0,12,159	0/0:9,0:10:15.92:0,16,207	0/0:7,0:8:13.21:0,13,148	1/1:6,6:12:15.45:258,15,0	1/1:6,1:7:8.96:131,9,0	1/1:4,10:14:12.01:175,12,0	0/0:5,0:5:0.26:0,0,1	0/0:7,0:7:5.81:0,6,91	0/0:3,0:4:2.53:0,3,63	1/1:5,0:5:0.47:1,0,0	0/0:5,0:5:3:0,3,27	0/1:8,12:20:3.81:481,0,4	0/0:4,0:4:3.01:0,3,41
chr10	106883632	.	GCA	G	5010.51	PASS	AB=0.886;AC=36;AF=0.692;AN=52;BaseQRankSum=10.116;DP=653;FS=19.713;HRun=0;HaplotypeScore=94.9212;InbreedingCoeff=0.1733;MQ=61.00;MQ0=15;MQRankSum=2.295;QD=8.88;ReadPosRankSum=7.912;VQSLOD=2.6671;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,24:38:7.92:513,8,0	0/1:9,0:9:16.57:19,0,17	./.	./.	1/1:9,11:18:14.13:167,14,0	0/1:7,10:18:65.30:168,0,65	1/1:12,15:30:22.75:338,23,0	0/0:14,0:13:2.82:0,3,66	1/1:4,12:15:14.91:151,15,0	0/0:22,0:22:2.21:0,2,407	0/1:20,2:22:10.23:10,0,362	1/1:11,20:31:22.37:296,22,0	1/1:3,8:11:9.01:102,9,0	0/1:5,21:26:19.16:225,0,19	1/1:5,10:13:17.78:204,18,0	0/0:12,0:12:27.03:0,27,329	1/1:11,29:42:45.67:678,46,0	1/1:11,34:46:62.80:673,63,0	1/1:14,0:12:3.65:76,4,0	0/1:17,0:17:24.40:67,0,24	0/1:76,0:75:99:222,0,232	1/1:8,11:19:17.85:204,18,0	1/1:8,7:15:8.84:102,9,0	1/1:7,23:31:44.96:490,45,0	1/1:7,12:18:17.72:181,18,0	0/1:26,0:26:31.67:32,0,297	0/1:21,0:20:4.18:91,0,4	0/0:23,0:22:21.89:0,22,540
chr10	106884244	.	GT	G	2266.14	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.351;DP=642;FS=1.672;HRun=11;HaplotypeScore=70.7160;InbreedingCoeff=0.8986;MQ=74.39;MQ0=1;MQRankSum=-0.051;QD=15.21;ReadPosRankSum=-0.449;VQSLOD=4.0776;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,2:28:28.85:0,29,682	1/1:1,9:11:29:228,29,0	0/0:24,1:19:8.52:0,9,224	0/0:26,0:22:1.68:0,2,204	0/0:25,1:26:41.79:0,42,639	0/0:19,1:21:29.32:0,29,495	0/0:18,1:20:32.32:0,32,527	1/1:13,21:34:59.78:481,60,0	0/0:17,0:17:42.11:0,42,448	0/0:29,1:31:32.33:0,32,529	0/0:22,2:24:16.84:0,17,570	0/0:20,0:22:59.82:0,60,602	0/0:15,1:16:20.47:0,20,423	0/0:16,0:17:41.96:0,42,424	0/0:18,0:19:47.97:0,48,486	0/0:10,2:12:8.44:0,8,295	0/0:25,1:26:50.54:0,51,736	0/0:17,2:19:4.85:0,5,463	1/1:9,18:29:57.96:451,58,0	1/1:5,22:27:68.85:559,69,0	1/1:3,7:10:20.97:172,21,0	0/0:25,0:25:60.14:0,60,633	0/0:23,1:26:35.30:0,35,551	0/0:10,1:12:11.28:0,11,310	0/0:34,1:36:68.43:0,68,916	0/0:21,0:21:54.12:0,54,567	1/1:6,32:38:43.70:560,44,0	0/0:21,1:24:35.15:0,35,535
chr10	106884866	.	T	TG	1427.39	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-5.137;DP=417;FS=5.897;HRun=8;HaplotypeScore=50.9596;InbreedingCoeff=0.9081;MQ=70.41;MQ0=4;MQRankSum=1.195;QD=15.86;ReadPosRankSum=-0.615;VQSLOD=3.2095;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:90.01:0,90,813	1/1:2,6:8:15.04:173,15,0	0/0:16,0:9:25.49:0,25,181	0/1:16,0:12:0.15:0,0,80	0/0:19,0:19:45.02:0,45,411	0/0:13,0:13:24:0,24,220	0/0:9,0:9:21:0,21,192	1/1:9,7:16:15.03:163,15,0	0/0:7,0:7:8.98:0,9,82	0/0:31,0:31:74.78:0,75,686	0/0:9,0:9:14.99:0,15,137	0/0:14,0:14:39.02:0,39,357	0/0:7,0:7:18:0,18,163	0/0:15,0:15:36.01:0,36,329	0/0:15,0:14:36:0,36,325	0/0:7,0:7:21.01:0,21,192	0/0:35,0:35:96.05:0,96,878	0/0:21,0:21:54.03:0,54,494	1/1:5,11:16:38.84:409,39,0	1/1:1,18:19:45.09:503,45,0	1/1:1,3:5:11.87:118,12,0	0/0:8,0:8:18:0,18,164	0/0:13,0:13:33:0,33,297	0/0:5,0:5:12.01:0,12,109	0/0:20,0:20:60.03:0,60,549	0/0:20,0:20:56.98:0,57,509	1/1:2,7:9:21.06:242,21,0	0/0:8,0:8:24.01:0,24,220
chr10	106891965	.	GCA	G	5326.05	PASS	AB=0.577;AC=11;AF=0.196;AN=56;BaseQRankSum=13.642;DP=986;FS=1.481;HRun=0;HaplotypeScore=121.1028;InbreedingCoeff=0.8912;MQ=58.16;MQ0=18;MQRankSum=-0.011;QD=27.04;ReadPosRankSum=1.744;VQSLOD=6.2206;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,141,2317	0/1:4,11:15:13.86:357,0,14	0/0:50,0:22:43.54:0,44,607	0/0:51,0:28:37.42:0,37,850	0/0:24,0:24:54.11:0,54,880	0/0:38,0:38:90.31:0,90,1480	0/0:33,1:33:46.46:0,46,1281	1/1:8,23:31:68.25:852,68,0	0/0:37,0:37:89.28:0,89,1474	0/0:35,1:36:58.50:0,59,1449	0/0:25,0:24:35.06:0,35,1106	0/0:43,0:43:99:0,108,1712	0/0:35,0:35:87.30:0,87,1420	0/0:31,0:31:87.30:0,87,1419	0/0:33,0:33:84.27:0,84,1351	0/0:30,0:30:81.25:0,81,1307	0/0:34,1:35:52.51:0,53,1402	0/0:30,0:29:72.25:0,72,1196	1/1:5,19:24:42.24:660,42,0	1/1:10,16:26:69.15:824,69,0	1/1:10,73:82:99:2292,186,0	0/0:32,0:32:90.31:0,90,1454	0/0:27,1:28:31.44:0,31,1042	0/0:56,0:56:99:0,140,2184	0/0:33,0:33:81.26:0,81,1315	0/0:36,0:36:87.30:0,87,1435	1/1:1,16:14:27.08:340,27,0	0/0:16,0:16:39.13:0,39,642
chr10	106892087	.	A	ACT	5686.70	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.080;DP=875;FS=0.710;HRun=0;HaplotypeScore=115.3569;InbreedingCoeff=0.9908;MQ=67.38;MQ0=8;MQRankSum=1.313;QD=31.07;ReadPosRankSum=-0.534;VQSLOD=6.6385;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,124,1425	1/1:2,15:17:27.91:558,28,0	0/0:53,0:25:44.91:0,45,473	0/0:68,0:33:10.38:0,10,357	0/0:25,0:25:56.52:0,57,718	0/0:28,0:28:65.94:0,66,706	0/0:19,0:19:45.06:0,45,492	1/1:24,7:31:83.84:986,84,0	0/0:34,0:35:87.14:0,87,985	0/0:36,0:36:96.11:0,96,1102	0/0:15,0:15:45.03:0,45,492	0/0:26,0:26:57.06:0,57,621	0/0:22,0:22:57.10:0,57,665	0/0:33,0:33:90.10:0,90,1003	0/0:29,0:28:84.12:0,84,933	0/0:26,0:26:72.15:0,72,849	0/0:35,0:34:77.52:0,78,907	0/0:39,0:39:99:0,99,1180	1/1:4,19:24:60.13:836,60,0	1/1:1,29:31:57.67:968,58,0	1/1:35,23:58:65.22:1727,65,0	0/0:20,0:20:57.07:0,57,635	0/0:24,0:24:59.90:0,60,677	0/0:42,0:42:90.12:0,90,1006	0/0:26,0:26:77.97:0,78,905	0/0:24,0:24:72.12:0,72,808	1/1:4,18:22:36.12:611,36,0	0/0:11,0:11:29.98:0,30,297
chr10	106892945	.	GACACACACAC	G	315.35	PASS	AB=0.875;AC=5;AF=0.109;AN=46;BaseQRankSum=3.614;DP=461;FS=7.081;HRun=0;HaplotypeScore=131.7148;InbreedingCoeff=0.5044;MQ=60.40;MQ0=28;MQRankSum=-3.530;QD=9.27;ReadPosRankSum=-0.009;VQSLOD=1.9673;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:30.10:0,30,979	1/1:5,0:6:9.03:184,9,0	./.	./.	0/0:13,0:13:30.10:0,30,1069	0/0:8,0:7:7.21:0,7,170	0/0:22,0:22:27.98:0,28,1084	./.	0/0:15,0:14:3.01:0,3,96	0/0:10,0:10:21.07:0,21,641	0/0:7,0:8:3.01:0,3,139	0/0:16,0:14:21.07:0,21,817	0/0:20,0:19:33.05:0,33,1358	0/0:11,0:10:27.56:0,28,1001	0/0:14,0:12:11.64:0,12,459	0/0:9,0:9:12.04:0,12,360	0/0:28,0:25:32.99:0,33,1099	0/0:12,0:9:9.03:0,9,288	1/1:11,2:13:5.85:176,6,0	./.	./.	0/0:18,0:18:27.09:0,27,1161	0/0:18,0:17:9.02:0,9,194	0/0:23,0:21:15.05:0,15,489	0/0:13,0:12:18.06:0,18,745	0/0:18,0:17:28.65:0,29,1011	0/1:12,0:14:27.88:65,0,28	0/0:24,0:20:30.99:0,31,1217
chr10	106892997	.	CGAGAGAGA	C	481.10	PASS	AB=0.882;AC=6;AF=0.125;AN=48;BaseQRankSum=1.910;DP=453;FS=10.039;HRun=0;HaplotypeScore=104.2628;InbreedingCoeff=0.3624;MQ=37.67;MQ0=68;MQRankSum=-3.638;QD=7.18;ReadPosRankSum=0.475;VQSLOD=0.9448;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:31:21.96:0,22,710	1/1:4,1:4:2.61:54,3,0	./.	./.	0/0:18,0:18:3.01:0,3,77	0/0:11,0:9:6:0,6,143	0/0:23,0:21:0.47:0,0,1	0/0:22,0:19:0:0,0,1	0/0:15,0:14:12.27:0,12,166	0/0:13,0:10:14.41:0,14,353	./.	0/0:15,0:10:6.02:0,6,170	0/0:16,0:16:2.82:0,3,19	0/0:12,0:8:3.01:0,3,65	0/0:11,0:7:9.01:0,9,268	0/0:14,0:12:10.28:0,10,113	0/0:27,0:24:22.12:0,22,595	0/0:17,0:11:9.03:0,9,340	1/1:16,2:18:12.04:269,12,0	0/0:11,3:9:1.41:0,1,3	0/1:25,0:18:0:0,0,0	0/0:21,0:18:6:0,6,124	./.	0/0:28,0:24:9.15:0,9,249	0/0:12,0:10:6:0,6,93	0/0:25,0:23:27.02:0,27,631	0/1:12,2:13:17.18:263,0,17	0/0:19,0:14:3.01:0,3,108
chr10	106893728	.	T	TCAAAAA	3853.34	PASS	AB=1.000;AC=12;AF=0.222;AN=54;BaseQRankSum=-2.580;DP=551;FS=0.600;HRun=0;HaplotypeScore=120.1023;InbreedingCoeff=0.7983;MQ=70.86;MQ0=1;MQRankSum=-7.624;QD=26.39;ReadPosRankSum=-5.999;VQSLOD=1.8429;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,99,2020	./.	0/1:22,0:20:0.34:0,0,338	0/0:24,0:17:7.55:0,8,88	0/0:17,0:17:33.11:0,33,684	0/0:20,0:20:42.10:0,42,833	0/1:17,0:17:25.23:25,0,411	1/1:21,3:25:33.09:942,33,0	0/0:12,0:12:30.10:0,30,606	0/0:19,0:19:36.12:0,36,735	0/0:22,0:22:57.16:0,57,1134	0/0:12,0:12:36.12:0,36,718	0/0:14,0:14:30.10:0,30,621	0/0:10,0:10:24.08:0,24,483	0/0:28,0:28:60.19:0,60,1207	0/0:16,0:16:30.10:0,30,609	0/0:25,0:25:63.22:0,63,1305	0/0:29,0:29:57.20:0,57,1167	1/1:18,7:26:39.01:941,39,0	1/1:10,12:22:36.06:1087,36,0	1/1:15,3:18:12.03:372,12,0	0/0:14,0:14:18.05:0,18,336	0/0:14,0:13:29.62:0,30,621	0/0:41,0:41:96.29:0,96,1928	0/0:18,0:18:33.11:0,33,637	0/0:20,0:20:39.12:0,39,759	1/1:7,7:14:14.62:486,15,0	0/0:5,0:5:12.04:0,12,249
chr10	106897351	.	TGAGAGA	T	803.05	PASS	AB=0.978;AC=14;AF=0.292;AN=48;BaseQRankSum=0.868;DP=432;FS=19.897;HRun=0;HaplotypeScore=95.2472;InbreedingCoeff=-0.0482;MQ=45.99;MQ0=18;MQRankSum=1.836;QD=4.08;ReadPosRankSum=-2.409;VQSLOD=-0.1453;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:21.53:0,22,419	0/1:5,0:6:0:0,0,0	./.	./.	0/0:12,0:12:6.02:0,6,122	0/1:12,0:12:47.35:47,0,64	0/0:21,0:19:6.31:0,6,153	0/0:22,0:22:2.04:0,2,6	0/1:12,0:11:53.91:54,0,244	0/0:20,0:19:17.09:0,17,277	./.	0/1:18,0:17:99:148,0,114	0/0:18,0:18:22.43:0,22,442	0/0:12,0:10:6.02:0,6,151	0/0:13,0:12:9.02:0,9,183	0/1:11,0:11:15.78:16,0,300	0/1:20,0:18:42.39:83,0,42	0/1:23,0:21:46.28:104,0,46	1/1:10,0:13:9.03:147,9,0	0/0:14,5:18:1.89:0,2,4	0/1:32,0:31:43.62:185,0,44	0/1:19,0:18:42.82:43,0,135	0/0:8,0:8:6.02:0,6,113	0/0:24,0:22:17.85:0,18,335	0/1:17,0:17:7.33:7,0,75	0/0:14,0:14:15.05:0,15,337	1/1:13,0:11:5.70:108,6,0	./.
chr10	106903102	.	T	TG	114.54	PASS	AB=0.835;AC=10;AF=0.278;AN=36;BaseQRankSum=3.232;DP=84;FS=1.987;HRun=0;HaplotypeScore=35.8262;InbreedingCoeff=0.1499;MQ=24.95;MQ0=25;MQRankSum=-1.931;QD=3.47;ReadPosRankSum=1.118;VQSLOD=2.7122;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:2.04:0,2,6	0/0:3,1:3:4.56:0,5,46	./.	./.	0/0:0,1:1:0:0,0,0	0/1:3,3:4:27.36:27,0,36	0/0:6,0:2:5.38:0,5,50	0/0:5,0:3:7.25:0,7,67	1/1:2,0:1:2.04:6,2,0	1/1:2,0:2:2.92:17,3,0	1/1:4,3:7:4.80:36,5,0	0/0:1,0:1:0:0,0,0	0/0:1,0:1:1.55:0,2,4	./.	./.	./.	0/0:1,0:1:3.01:0,3,41	./.	0/1:6,1:5:35.69:36,0,73	0/0:7,0:4:6.02:0,6,78	0/0:9,0:3:5.81:0,6,52	./.	./.	0/0:2,1:2:0.47:0,0,1	./.	0/1:6,2:5:38.11:93,0,38	0/1:1,0:1:0:0,0,0	./.
chr10	106903112	.	CCT	C	153.69	PASS	AB=0.925;AC=10;AF=0.227;AN=44;BaseQRankSum=5.617;DP=130;FS=16.296;HRun=0;HaplotypeScore=40.6058;InbreedingCoeff=-0.0161;MQ=28.44;MQ0=39;MQRankSum=-3.377;QD=2.90;ReadPosRankSum=1.815;VQSLOD=-0.5533;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:1.25:0,1,3	0/1:7,1:6:22.21:22,0,97	./.	./.	0/1:3,1:3:14.76:15,0,25	0/1:6,1:4:28.46:28,0,45	0/0:9,0:4:10.58:0,11,130	0/0:8,0:5:10.27:0,10,114	0/0:5,0:2:3.01:0,3,57	0/0:4,0:4:2.04:0,2,42	1/1:5,3:8:10.28:85,10,0	0/1:1,0:1:0:0,0,0	0/0:2,0:1:0.89:0,1,2	./.	0/1:2,0:2:0:0,0,0	./.	0/0:1,0:1:3.01:0,3,36	0/0:3,0:1:1.25:0,1,3	0/0:11,0:7:14.79:0,15,183	0/1:9,0:6:15.93:16,0,132	0/0:11,0:5:12.04:0,12,149	./.	./.	0/0:6,0:3:4.37:0,4,39	0/1:4,0:4:21.86:22,0,65	0/1:8,2:6:80.50:80,0,114	0/0:3,0:3:6.07:0,6,45	0/0:4,0:1:3.01:0,3,30
chr10	106903312	.	CGT	C	1395.15	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=3.193;DP=494;FS=3.861;HRun=0;HaplotypeScore=132.6797;InbreedingCoeff=0.9674;MQ=55.33;MQ0=5;MQRankSum=1.032;QD=17.22;ReadPosRankSum=-0.976;VQSLOD=3.6960;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,100,1510	1/1:0,3:3:9.03:112,9,0	0/0:23,0:5:9:0,9,119	0/0:25,0:9:18.06:0,18,271	0/0:19,0:19:42.14:0,42,688	0/0:17,0:17:39.12:0,39,587	0/0:15,0:15:39.11:0,39,607	1/1:7,14:22:38.93:432,39,0	0/0:14,0:14:35.71:0,36,578	0/0:15,0:15:34.93:0,35,518	0/0:16,0:16:42.09:0,42,618	0/0:17,0:17:39.13:0,39,621	0/0:20,1:21:23.09:0,23,855	0/0:15,0:15:42.10:0,42,621	0/0:24,0:24:63.19:0,63,954	0/0:13,0:13:33.08:0,33,497	0/0:22,0:22:54.17:0,54,819	0/0:23,0:23:57.18:0,57,884	1/1:11,7:18:21.06:253,21,0	1/1:1,9:10:20.99:227,21,0	1/1:2,9:11:14.77:168,15,0	0/0:14,0:14:36.07:0,36,495	0/0:14,0:14:42.12:0,42,651	0/0:31,0:31:82.99:0,83,1286	0/0:13,0:13:33.11:0,33,536	0/0:15,0:15:41.50:0,42,630	1/1:2,15:17:33:388,33,0	0/0:8,0:8:18.95:0,19,297
chr10	106904812	.	CAAAA	C	1415.62	PASS	AB=0.854;AC=6;AF=0.107;AN=56;BaseQRankSum=3.890;DP=642;FS=0.000;HRun=9;HaplotypeScore=110.9574;InbreedingCoeff=-0.1309;MQ=48.92;MQ0=30;MQRankSum=-10.222;QD=14.02;ReadPosRankSum=-3.825;VQSLOD=-0.5699;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:54.57:0,55,1219	0/1:12,1:13:99:175,0,173	0/0:16,0:3:9.03:0,9,204	0/0:24,0:1:3.01:0,3,78	0/0:35,0:35:72.11:0,72,1642	0/0:16,0:16:27.09:0,27,703	0/0:33,0:30:72.24:0,72,1563	0/1:27,0:23:99:320,0,101	0/0:21,0:20:48.12:0,48,1192	0/0:28,0:26:75.24:0,75,1689	0/0:20,0:19:45.15:0,45,1163	0/0:24,0:24:54.18:0,54,1281	0/0:21,0:17:36.12:0,36,867	0/0:15,0:14:30.10:0,30,768	0/0:21,0:20:30.06:0,30,712	0/0:26,0:26:69.24:0,69,1728	0/0:44,0:42:83.76:0,84,1973	0/0:31,0:31:38.58:0,39,845	0/1:15,5:20:88.39:390,0,88	0/1:12,4:16:99:251,0,156	0/1:6,1:5:62.06:62,0,67	0/0:16,0:17:33.11:0,33,790	0/0:18,0:15:27.09:0,27,705	0/0:25,0:23:48.15:0,48,1098	0/0:27,0:27:55.80:0,56,1490	0/0:24,0:24:69.22:0,69,1540	0/1:11,7:18:99:342,0,127	0/0:10,0:7:15.05:0,15,392
chr10	106904817	.	A	AC	2994.26	PASS	AB=0.593;AC=11;AF=0.196;AN=56;BaseQRankSum=1.939;DP=646;FS=0.432;HRun=0;HaplotypeScore=83.9495;InbreedingCoeff=0.8630;MQ=48.76;MQ0=27;MQRankSum=-11.063;QD=29.07;ReadPosRankSum=-2.574;VQSLOD=2.9118;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:57.39:0,57,738	1/1:1,12:13:33.11:457,33,0	0/0:16,0:3:9.03:0,9,125	0/0:24,0:1:3.01:0,3,42	0/0:31,0:31:72.09:0,72,921	0/0:18,0:18:30.09:0,30,404	0/0:33,0:30:78.15:0,78,1005	1/1:6,22:25:66.09:861,66,0	0/0:21,0:20:48.12:0,48,648	0/0:30,0:28:78.23:0,78,1039	0/0:19,0:18:45.15:0,45,623	0/0:24,0:24:54.09:0,54,737	0/0:20,0:17:36.12:0,36,502	0/0:14,0:13:29.94:0,30,419	0/0:22,0:21:33.02:0,33,402	0/0:26,0:26:69.23:0,69,963	0/0:44,0:42:77.66:0,78,1111	0/0:32,0:30:30.86:0,31,475	1/1:8,14:22:44.33:651,44,0	0/1:5,11:16:4.91:407,0,5	1/1:2,4:5:15.05:206,15,0	0/0:17,0:17:28.90:0,29,401	0/0:18,0:15:30.09:0,30,401	0/0:25,0:22:42.28:0,42,577	0/0:25,0:25:53.38:0,53,827	0/0:27,0:27:78.22:0,78,1015	1/1:9,9:18:47.49:589,47,0	0/0:11,0:9:15.05:0,15,209
chr10	106904842	.	CAAA	C	1171.99	PASS	AB=0.767;AC=5;AF=0.089;AN=56;BaseQRankSum=9.335;DP=568;FS=2.976;HRun=7;HaplotypeScore=94.3365;InbreedingCoeff=-0.1014;MQ=51.90;MQ0=13;MQRankSum=-7.529;QD=15.63;ReadPosRankSum=-1.256;VQSLOD=0.0308;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:66.13:0,66,1235	0/1:6,1:7:22.88:23,0,328	0/0:16,0:7:15.05:0,15,257	0/0:21,0:4:9.03:0,9,159	0/0:22,0:22:66.22:0,66,1363	0/0:18,0:18:51.09:0,51,916	0/0:26,0:25:72.21:0,72,1496	0/0:26,0:23:34.73:0,35,638	0/0:18,0:18:54.19:0,54,1132	0/0:28,0:28:81.19:0,81,1541	0/0:21,0:21:57.15:0,57,1087	0/0:20,0:20:60.21:0,60,1252	0/0:12,0:11:33.10:0,33,651	0/0:17,0:17:51.04:0,51,953	0/0:14,0:14:17.40:0,17,706	0/0:25,0:24:75.26:0,75,1587	0/0:39,0:37:88.55:0,89,1801	0/0:25,0:24:45.12:0,45,877	0/1:15,6:20:99:404,0,233	0/1:11,6:16:99:331,0,219	0/1:4,1:5:74.31:74,0,131	0/0:15,0:15:39.13:0,39,832	0/0:15,0:14:42.14:0,42,804	0/0:23,0:21:55.07:0,55,1135	0/0:23,0:23:52.70:0,53,1383	0/0:24,0:24:69.24:0,69,1414	0/1:9,16:25:99:458,0,241	0/0:10,0:9:27.08:0,27,525
chr10	106904852	.	AAAAAC	A	1568.81	PASS	AB=0.871;AC=8;AF=0.143;AN=56;BaseQRankSum=10.088;DP=547;FS=5.084;HRun=0;HaplotypeScore=114.2522;InbreedingCoeff=0.3510;MQ=52.92;MQ0=10;MQRankSum=-6.343;QD=16.01;ReadPosRankSum=-1.530;VQSLOD=2.6792;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:57.18:0,57,1513	0/1:6,1:7:36.84:37,0,90	0/0:17,0:11:21.02:0,21,307	0/0:11,0:4:6.02:0,6,152	0/0:22,0:22:63.21:0,63,1524	0/0:18,0:18:51.17:0,51,1373	0/0:24,0:24:72.20:0,72,1595	0/1:26,0:22:99:157,0,105	0/0:21,0:21:60.20:0,60,1478	0/0:28,0:28:84.28:0,84,2136	0/0:17,0:17:51.17:0,51,1346	0/0:21,0:21:60.20:0,60,1622	0/0:12,0:11:24.08:0,24,619	0/0:17,0:17:40.57:0,41,1085	0/0:14,0:14:23.30:0,23,759	0/0:26,0:25:78.26:0,78,2119	0/0:39,0:37:96.30:0,96,2529	0/0:22,0:20:51.15:0,51,1099	1/1:13,6:17:8.43:452,8,0	0/1:14,3:16:44.29:437,0,44	1/1:6,1:7:9.44:132,9,0	0/0:12,0:12:36.10:0,36,782	0/0:14,0:14:35.13:0,35,772	0/0:24,0:23:48.60:0,49,1325	0/0:25,0:25:67.74:0,68,1755	0/0:22,0:22:59.23:0,59,1613	0/1:15,7:22:50.64:493,0,51	0/0:10,0:10:30.10:0,30,763
chr10	106907634	.	A	AT	2761.97	PASS	AB=0.571;AC=11;AF=0.196;AN=56;BaseQRankSum=-8.402;DP=566;FS=5.177;HRun=9;HaplotypeScore=60.3168;InbreedingCoeff=0.8786;MQ=76.21;MQ0=0;MQRankSum=0.201;QD=21.92;ReadPosRankSum=-1.540;VQSLOD=3.8952;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:95.82:0,96,813	0/1:2,6:8:8.01:148,0,8	0/0:22,0:21:6.91:0,7,252	0/0:16,0:15:13.26:0,13,172	0/0:22,0:22:50.97:0,51,443	0/0:21,0:21:56.98:0,57,495	0/0:17,0:17:47.97:0,48,413	1/1:8,20:28:63.11:666,63,0	0/0:14,0:14:35.99:0,36,313	0/0:30,0:30:80.94:0,81,697	0/0:11,0:11:32.99:0,33,287	0/0:15,0:15:38.97:0,39,334	0/0:9,0:9:26.98:0,27,230	0/0:13,0:13:32.96:0,33,280	0/0:19,0:20:50.14:0,50,412	0/0:10,0:10:20.98:0,21,180	0/0:26,0:26:62.95:0,63,539	0/0:26,0:26:71.93:0,72,616	1/1:7,10:19:38.77:393,39,0	1/1:3,23:26:66.14:714,66,0	1/1:5,13:18:30.08:332,30,0	0/0:11,0:11:29.99:0,30,260	0/0:12,0:12:29.97:0,30,255	0/0:25,0:25:50.71:0,51,439	0/0:24,0:25:64.52:0,65,551	0/0:46,0:46:99:0,123,1064	1/1:5,22:27:63.16:687,63,0	0/0:12,0:12:20.95:0,21,182
chr10	106908070	.	GA	G	2574.77	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.979;DP=630;FS=4.854;HRun=9;HaplotypeScore=66.8362;InbreedingCoeff=0.9979;MQ=77.25;MQ0=4;MQRankSum=-3.300;QD=19.21;ReadPosRankSum=-0.437;VQSLOD=3.8964;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:96.28:0,96,1106	1/1:0,12:11:27.01:247,27,0	0/0:39,0:32:40.32:0,40,570	0/0:21,0:18:44.61:0,45,459	0/0:24,0:25:75.05:0,75,839	0/0:16,1:17:20.66:0,21,481	0/0:19,0:19:51.15:0,51,589	1/1:9,22:27:59.99:541,60,0	0/0:18,1:19:20.68:0,21,491	0/0:27,0:29:84.06:0,84,933	0/0:19,0:19:57.17:0,57,658	0/0:19,0:19:54.61:0,55,602	0/0:15,0:15:45.11:0,45,499	0/0:16,0:16:42.12:0,42,483	0/0:13,0:13:36.58:0,37,416	0/0:11,0:11:33.09:0,33,369	0/0:35,0:35:99:0,104,1148	0/0:25,0:25:72.18:0,72,807	1/1:4,18:21:54.02:494,54,0	1/1:2,22:23:54.01:494,54,0	1/1:4,17:20:48.02:439,48,0	0/0:28,0:28:78.22:0,78,891	0/0:16,0:16:39.06:0,39,425	0/0:30,0:30:84.25:0,84,968	0/0:21,0:21:48.14:0,48,553	0/0:25,0:25:66.19:0,66,751	1/1:2,22:23:60.03:549,60,0	0/0:16,0:16:39.08:0,39,427
chr10	106913149	.	CTGTGTGTGTGTGTG	C	867.97	PASS	AB=0.785;AC=6;AF=0.130;AN=46;BaseQRankSum=5.857;DP=426;FS=0.000;HRun=0;HaplotypeScore=137.4780;InbreedingCoeff=0.5781;MQ=44.18;MQ0=41;MQRankSum=-2.636;QD=16.69;ReadPosRankSum=-2.268;VQSLOD=1.8462;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:30:33.11:0,33,1328	./.	./.	./.	0/0:12,0:10:6.02:0,6,294	0/0:20,0:16:28.91:0,29,1247	0/0:23,0:21:25.91:0,26,1261	1/1:13,4:16:11.81:129,12,0	0/0:11,0:11:11.94:0,12,451	0/0:14,0:9:18.06:0,18,790	./.	0/0:20,0:17:24.03:0,24,963	0/0:13,0:12:24.08:0,24,1116	0/0:16,0:16:19:0,19,680	0/0:22,0:21:17.21:0,17,892	0/0:25,0:24:43.50:0,44,1755	0/0:33,0:30:54.45:0,54,2101	0/0:25,0:25:42.14:0,42,1791	0/1:9,6:15:99:407,0,222	0/1:6,0:5:0:0,0,0	./.	0/0:10,0:7:6.02:0,6,285	0/0:3,0:2:6.02:0,6,329	0/0:38,0:36:52.12:0,52,2369	0/0:7,0:7:9.03:0,9,421	0/0:17,0:16:39.07:0,39,1645	1/1:6,6:10:12.50:448,13,0	0/0:10,0:3:6.02:0,6,318
chr10	106913491	.	A	ATT	2518.53	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=-6.845;DP=296;FS=0.000;HRun=9;HaplotypeScore=37.5965;InbreedingCoeff=0.8410;MQ=71.37;MQ0=0;MQRankSum=-0.734;QD=27.98;ReadPosRankSum=-3.580;VQSLOD=1.9700;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:48.10:0,48,511	1/1:0,4:4:12.04:185,12,0	0/0:11,0:6:12.43:0,12,103	0/1:12,0:7:13.47:22,0,13	0/0:8,0:8:21.05:0,21,224	0/0:15,0:15:36.09:0,36,383	0/0:6,0:6:18.05:0,18,192	1/1:5,18:24:56.68:833,57,0	0/0:6,0:6:18.05:0,18,192	0/0:9,0:9:27.05:0,27,280	0/0:7,0:7:21.05:0,21,223	0/0:3,0:3:6.02:0,6,64	0/0:6,0:6:15.02:0,15,152	0/0:13,0:13:39.10:0,39,415	0/0:10,0:10:30.08:0,30,319	0/0:5,0:5:15.04:0,15,160	0/0:29,0:30:69.10:0,69,790	0/0:21,0:21:63.16:0,63,671	1/1:5,12:18:39.12:579,39,0	1/1:0,9:9:27.09:416,27,0	1/1:0,4:5:15.05:213,15,0	./.	0/0:4,0:4:12.03:0,12,128	0/0:4,0:4:9.01:0,9,96	0/0:12,0:12:33.07:0,33,351	0/0:11,0:11:30.07:0,30,319	1/1:6,11:17:29.95:455,30,0	0/0:5,0:5:15.04:0,15,160
chr10	106914035	.	G	GCTGT	3679.79	PASS	AB=0.830;AC=12;AF=0.214;AN=56;BaseQRankSum=-7.963;DP=565;FS=7.318;HRun=0;HaplotypeScore=93.7460;InbreedingCoeff=0.5637;MQ=66.84;MQ0=2;MQRankSum=-1.305;QD=19.37;ReadPosRankSum=-0.536;VQSLOD=2.2699;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:39.58:0,40,907	1/1:8,0:8:6.02:138,6,0	0/0:23,0:14:9.03:0,9,131	0/1:17,0:16:15.34:15,0,212	0/0:6,0:6:12.04:0,12,185	0/0:11,0:11:17.80:0,18,247	0/0:26,0:26:54.17:0,54,837	0/1:27,0:27:0.87:408,0,1	0/0:21,0:21:42.14:0,42,662	0/0:18,0:20:33.09:0,33,458	0/0:6,0:6:6.02:0,6,96	0/0:22,0:23:47.97:0,48,683	0/0:13,0:13:21.07:0,21,335	0/0:24,0:24:57.19:0,57,909	0/0:28,0:28:48.14:0,48,720	0/0:10,0:10:21.07:0,21,330	0/0:34,0:33:81.23:0,81,1202	0/0:23,0:23:48.16:0,48,754	1/1:15,10:25:27.07:577,27,0	1/1:4,8:12:21.07:484,21,0	0/1:35,31:70:27.88:1287,0,28	0/1:7,7:15:26.83:410,0,27	0/0:9,0:9:18.06:0,18,283	0/0:26,0:26:51.17:0,51,811	0/0:14,0:14:30.03:0,30,446	0/0:24,0:24:36.10:0,36,532	1/1:10,6:16:15.05:360,15,0	0/0:7,0:7:9.03:0,9,136
chr10	106916666	.	GTTTGT	G	371.95	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.898;DP=488;FS=0.000;HRun=0;HaplotypeScore=90.1366;InbreedingCoeff=0.9702;MQ=74.97;MQ0=2;MQRankSum=-1.103;QD=41.33;ReadPosRankSum=0.284;VQSLOD=3.5666;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.18:0,51,1499	1/1:1,8:9:24.08:465,24,0	0/0:25,0:22:44.43:0,44,891	0/0:15,0:11:23.43:0,23,538	0/0:24,0:24:66.23:0,66,1907	0/0:22,0:22:54.14:0,54,1359	0/0:13,0:13:33.11:0,33,946	0/0:25,0:25:54.17:0,54,1411	0/0:5,0:5:15.05:0,15,441	0/0:25,0:25:57.18:0,57,1453	0/0:10,0:10:24.08:0,24,618	0/0:9,0:9:24.08:0,24,705	0/0:10,0:10:30.10:0,30,878	0/0:14,0:14:33.11:0,33,970	0/0:15,0:15:45.15:0,45,1287	0/0:14,0:13:36.12:0,36,1059	0/0:33,0:33:93.29:0,93,2655	0/0:28,0:28:75.24:0,75,2096	0/0:16,0:16:24.08:0,24,602	0/0:13,0:13:36.12:0,36,1030	0/0:19,0:19:57.20:0,57,1643	0/0:10,0:10:24.07:0,24,645	0/0:14,0:14:39.13:0,39,1115	0/0:24,0:24:63.22:0,63,1838	0/0:23,0:23:66.23:0,66,1940	0/0:20,0:20:57.18:0,57,1613	0/0:11,0:11:27.09:0,27,754	0/0:23,0:23:69.24:0,69,2015
chr10	106919272	.	GGT	G	995.16	PASS	AB=0.886;AC=26;AF=0.520;AN=50;BaseQRankSum=7.673;DP=758;FS=0.965;HRun=0;HaplotypeScore=115.9974;InbreedingCoeff=-0.4800;MQ=59.22;MQ0=6;MQRankSum=0.959;QD=1.57;ReadPosRankSum=1.797;VQSLOD=2.2882;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,3:34:57.79:58,0,476	0/0:10,0:8:5.74:0,6,37	./.	./.	0/1:11,3:14:48.73:49,0,123	0/1:17,3:21:81.37:81,0,208	0/1:28,5:33:27.36:27,0,363	./.	0/1:31,6:37:52.61:53,0,498	0/1:43,1:45:43.47:43,0,480	0/1:15,0:15:7.91:8,0,181	0/1:26,5:31:43.18:43,0,615	0/1:27,5:32:3.59:4,0,756	0/1:31,2:33:99:119,0,503	0/1:16,6:22:45.72:46,0,199	0/1:19,4:25:66.30:66,0,427	0/1:23,6:29:7.74:8,0,677	0/1:21,2:22:44.26:44,0,397	1/1:16,0:22:12.92:60,13,0	1/1:13,0:20:8.52:42,9,0	1/1:32,0:42:2.60:10,3,0	0/1:24,1:27:81.49:81,0,406	0/1:20,1:22:27:27,0,304	0/1:37,4:42:84.73:85,0,761	0/0:29,0:28:15.27:0,15,577	0/1:39,1:41:99:110,0,386	1/1:9,0:22:13.68:80,14,0	0/0:19,0:19:3.60:0,4,328
chr10	106920549	.	AGT	A	795.52	PASS	AB=0.926;AC=25;AF=0.481;AN=52;BaseQRankSum=3.047;DP=591;FS=5.957;HRun=0;HaplotypeScore=78.8071;InbreedingCoeff=-0.2787;MQ=62.36;MQ0=7;MQRankSum=-1.206;QD=2.02;ReadPosRankSum=1.534;VQSLOD=1.1491;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,1:20:23.13:23,0,79	1/1:6,0:7:8.78:54,9,0	./.	./.	0/1:10,1:10:23.12:23,0,50	0/0:11,0:17:6:0,6,53	0/0:32,0:41:2.79:0,3,20	0/0:18,0:18:0.89:0,1,2	0/1:16,1:17:35.08:35,0,55	0/0:28,0:29:29.92:0,30,314	0/1:9,0:9:13:13,0,97	0/1:30,0:30:12.30:12,0,140	0/1:11,5:16:5.89:6,0,115	0/1:17,2:19:50.05:60,0,50	0/1:21,1:22:5.18:5,0,218	0/1:25,0:25:11.86:12,0,238	0/1:33,1:33:65.48:65,0,131	0/1:17,2:19:64.89:65,0,171	1/1:22,0:22:4.99:39,5,0	1/1:17,0:17:11.51:78,12,0	1/1:39,3:44:23.57:187,24,0	0/0:14,0:15:3.01:0,3,44	0/0:19,0:19:0.08:0,0,100	0/1:25,1:25:46.08:46,0,301	0/1:13,0:14:32.01:32,0,35	0/1:15,4:19:71.27:71,0,176	1/1:9,5:13:9.02:96,9,0	0/1:5,1:6:23.13:23,0,79
chr10	106920696	.	C	CTGTGTG	4385.76	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.645;DP=949;FS=1.664;HRun=0;HaplotypeScore=230.1102;InbreedingCoeff=0.9932;MQ=60.03;MQ0=2;MQRankSum=-2.032;QD=20.12;ReadPosRankSum=-1.754;VQSLOD=4.4121;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:68.30:0,68,1718	1/1:2,9:14:11.96:321,12,0	0/0:47,0:32:56.76:0,57,851	0/0:46,0:34:33.47:0,33,647	0/0:21,0:21:42.13:0,42,840	0/0:24,0:24:50.98:0,51,1053	0/0:38,0:39:90.20:0,90,1665	1/1:15,0:36:56.38:620,56,0	0/0:40,0:40:84.27:0,84,1759	0/0:34,0:34:63.99:0,64,1608	0/0:14,0:14:27.08:0,27,512	0/0:45,0:45:62.08:0,62,1642	0/0:24,0:25:60.20:0,60,1203	0/0:31,0:31:60.17:0,60,1170	0/0:39,0:40:90.29:0,90,1795	0/0:23,0:23:41.89:0,42,1045	0/0:29,0:31:60.24:0,60,1443	0/0:48,0:48:99:0,108,2095	1/1:7,0:16:29.92:333,30,0	1/1:6,0:26:48.37:623,48,0	1/1:54,0:103:99:2010,162,0	0/0:25,0:25:42.13:0,42,861	0/0:29,0:29:63.18:0,63,1293	0/0:48,0:48:86.84:0,87,1711	0/0:26,0:26:45.11:0,45,829	0/0:36,0:36:80.85:0,81,1605	1/1:10,0:21:36.12:479,36,0	0/0:18,0:18:45.15:0,45,964
chr10	106921097	.	TTTG	T	446.73	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=3.384;DP=555;FS=1.439;HRun=0;HaplotypeScore=92.7747;InbreedingCoeff=0.3445;MQ=78.34;MQ0=4;MQRankSum=-2.705;QD=5.32;ReadPosRankSum=-0.695;VQSLOD=2.2408;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,2059	1/1:0,15:15:35.28:521,35,0	0/0:48,0:30:47.52:0,48,686	0/0:37,0:24:21.54:0,22,292	0/0:17,0:17:51.17:0,51,944	0/0:22,0:22:66.13:0,66,904	0/0:19,0:19:57.13:0,57,928	0/0:20,0:20:50.49:0,50,442	0/0:13,0:13:39.13:0,39,706	0/0:11,0:11:33.04:0,33,488	0/0:11,0:11:30.03:0,30,497	0/0:16,0:16:37.22:0,37,753	0/0:12,0:12:36.12:0,36,714	0/0:18,0:18:51.97:0,52,803	0/0:14,0:14:42.13:0,42,759	0/0:18,0:18:48.13:0,48,864	0/0:23,0:23:69.21:0,69,1319	0/0:14,0:14:42.14:0,42,891	0/1:14,0:13:21.41:21,0,255	0/1:27,0:27:11.73:12,0,380	0/1:28,0:28:12.91:13,0,577	0/0:13,0:13:39.06:0,39,587	0/0:24,0:24:72.14:0,72,1166	0/0:10,0:10:25.90:0,26,533	0/0:16,0:16:43.37:0,43,776	0/0:24,0:24:63.17:0,63,1076	0/0:21,0:20:11.58:0,12,406	0/0:7,0:7:21.03:0,21,333
chr10	106921099	.	TG	T	1241.17	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=1.989;DP=558;FS=4.690;HRun=9;HaplotypeScore=70.8662;InbreedingCoeff=0.8955;MQ=77.60;MQ0=4;MQRankSum=-2.006;QD=11.39;ReadPosRankSum=-0.442;VQSLOD=2.8566;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:82.20:0,82,811	1/1:15,0:15:34.51:202,35,0	0/0:48,2:30:11.03:0,11,337	0/0:35,0:23:11.70:0,12,162	0/0:18,0:18:44.91:0,45,447	0/0:23,0:23:42.86:0,43,378	0/0:19,0:19:32.95:0,33,319	0/0:20,0:20:13.68:0,14,107	0/0:12,0:12:26.91:0,27,246	0/0:11,0:11:22.28:0,22,213	0/0:12,0:12:15.02:0,15,154	0/0:15,0:15:29.37:0,29,334	0/0:13,0:13:33.06:0,33,347	0/0:16,1:17:2.06:0,2,254	0/0:15,0:15:37.97:0,38,345	0/0:17,0:17:30.93:0,31,320	0/0:23,0:23:48.10:0,48,522	0/0:14,0:14:36.09:0,36,399	1/1:7,8:14:17.77:192,18,0	1/1:23,4:27:42.19:334,42,0	1/1:23,8:31:45.95:385,46,0	0/0:14,0:14:4.78:0,5,218	0/0:22,0:22:51.01:0,51,496	0/0:10,0:10:24.06:0,24,265	0/0:18,0:18:45.05:0,45,455	0/0:21,0:21:39.03:0,39,389	1/1:14,7:20:19.94:300,20,0	0/0:7,0:7:15:0,15,147
chr10	106922870	.	TGA	T	228.28	PASS	AB=0.903;AC=14;AF=0.250;AN=56;BaseQRankSum=5.447;DP=622;FS=0.835;HRun=0;HaplotypeScore=101.0701;InbreedingCoeff=-0.2525;MQ=66.06;MQ0=12;MQRankSum=-0.338;QD=0.73;ReadPosRankSum=1.793;VQSLOD=1.9236;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:36,5:41:24.89:25,0,479	0/0:6,0:6:2.99:0,3,24	0/1:32,1:20:18.45:18,0,165	0/0:57,0:38:12.04:0,12,181	0/1:23,1:25:25.41:25,0,81	0/1:17,0:15:8.47:8,0,167	0/1:24,2:26:24.89:25,0,492	0/0:26,0:25:3.44:0,3,21	0/0:20,1:23:5.61:0,6,485	0/0:31,0:30:36.10:0,36,491	1/1:8,0:8:5.85:47,6,0	0/0:16,0:15:8.96:0,9,69	0/0:12,0:13:3.95:0,4,213	0/1:17,2:20:54.05:54,0,243	0/1:21,3:23:47.51:48,0,141	0/1:20,2:22:0.39:0,0,402	0/0:22,0:24:14.13:0,14,300	0/0:26,0:26:45.09:0,45,608	0/0:14,0:14:3.81:0,4,10	0/0:12,0:12:1.66:0,2,37	0/0:10,0:9:3:0,3,26	0/1:28,1:29:15.47:15,0,187	0/0:20,1:21:9.03:0,9,129	0/1:24,4:31:33.98:34,0,517	0/0:18,0:19:12.93:0,13,321	0/1:27,3:30:45.99:46,0,187	0/0:13,0:12:2.92:0,3,17	0/1:2,1:3:24.48:24,0,82
chr10	106927122	.	A	AGTGGAC	2091.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.623;DP=1226;FS=33.279;HRun=0;HaplotypeScore=262.2221;InbreedingCoeff=0.9703;MQ=87.49;MQ0=0;MQRankSum=-7.710;QD=83.67;ReadPosRankSum=0.911;VQSLOD=2.2347;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:67,0:67:99:0,172,3968	0/0:6,0:6:12.04:0,12,280	0/0:54,0:54:99:0,139,3001	0/0:46,0:46:99:0,123,2653	0/0:16,0:16:48.15:0,48,1074	0/0:44,0:44:99:0,111,2584	0/0:70,0:70:99:0,195,4384	0/0:33,0:33:90.31:0,90,2070	0/0:75,0:75:99:0,193,4371	0/0:56,0:56:99:0,154,3488	0/0:32,0:32:87.30:0,87,2020	1/1:6,19:25:66.23:2187,66,0	0/0:50,0:50:99:0,138,3185	0/0:54,0:54:99:0,141,3204	0/0:65,0:65:99:0,184,4163	0/0:50,0:50:99:0,126,2863	0/0:69,0:69:99:0,190,4265	0/0:41,0:41:99:0,117,2721	0/0:16,0:16:48.16:0,48,1065	0/0:18,0:18:51.15:0,51,1069	0/0:62,0:62:99:0,162,3682	0/0:41,0:41:96.33:0,96,2180	0/0:27,0:27:72.25:0,72,1679	0/0:70,0:69:99:0,164,3997	0/0:32,0:32:90.31:0,90,2086	0/0:59,0:59:99:0,166,3771	0/0:16,0:16:45.11:0,45,992	0/0:32,0:32:96.33:0,96,2236
chr10	106927338	.	G	GAC	5943.62	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=3.672;DP=1293;FS=2.095;HRun=0;HaplotypeScore=163.0098;InbreedingCoeff=0.9999;MQ=89.06;MQ0=0;MQRankSum=-3.569;QD=45.37;ReadPosRankSum=-2.745;VQSLOD=4.2938;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:73,0:73:99:0,211,2979	0/0:13,0:13:30.10:0,30,441	0/0:64,0:65:99:0,150,2292	0/0:48,0:48:99:0,121,1644	0/0:19,0:19:54.05:0,54,743	0/0:51,0:51:99:0,147,2112	0/0:67,0:67:99:0,190,2722	1/1:4,19:23:57.07:982,57,0	0/0:85,0:85:99:0,244,3454	0/0:47,0:47:99:0,132,1877	0/0:25,0:25:60.06:0,60,788	0/0:39,0:39:99:0,108,1459	0/0:53,0:53:99:0,153,2201	0/0:52,0:52:99:0,153,2209	0/0:76,0:76:99:0,220,3162	0/0:62,0:62:99:0,184,2636	0/0:71,0:71:99:0,208,3017	0/0:39,0:39:99:0,108,1477	1/1:0,15:15:42.07:710,42,0	1/1:0,21:21:48.14:889,48,0	1/1:1,48:50:99:2358,126,0	0/0:52,0:52:99:0,147,2097	0/0:32,0:32:89.92:0,90,1245	0/0:85,0:85:99:0,244,3502	0/0:33,0:32:90.25:0,90,1296	0/0:54,0:54:99:0,156,2176	1/1:1,21:22:54.19:1004,54,0	0/0:21,0:21:63.21:0,63,927
chr10	106931026	.	A	AC	6867.45	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-13.124;DP=601;FS=3.963;HRun=1;HaplotypeScore=57.1843;InbreedingCoeff=0.9988;MQ=64.34;MQ0=1;MQRankSum=-0.916;QD=40.88;ReadPosRankSum=-0.252;VQSLOD=5.1817;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.25:0,78,1067	1/1:0,9:9:24.08:384,24,0	0/0:17,0:15:36.98:0,37,512	0/0:17,0:16:26.71:0,27,421	0/0:31,0:30:87.27:0,87,1198	0/0:16,0:16:48.15:0,48,651	0/0:12,0:12:33.05:0,33,419	1/1:1,30:27:78.27:1236,78,0	0/0:30,0:30:90.24:0,90,1216	0/0:18,0:18:54.17:0,54,737	0/0:31,0:31:90.28:0,90,1225	1/1:0,23:23:66.23:1055,66,0	0/0:11,0:11:33.10:0,33,445	0/0:14,0:14:42.14:0,42,586	0/0:24,0:24:72.24:0,72,1005	0/0:19,0:19:57.19:0,57,797	0/0:39,0:39:99:0,114,1571	0/0:25,0:25:72.24:0,72,1004	1/1:1,29:30:84.29:1341,84,0	1/1:0,26:27:69.06:1078,69,0	1/1:0,11:11:24.08:384,24,0	0/0:14,0:14:42.14:0,42,586	0/0:13,0:13:39.10:0,39,511	0/0:14,0:14:42.14:0,42,588	0/0:29,0:29:87.29:0,87,1212	0/0:22,0:22:66.22:0,66,921	1/1:5,32:37:87.30:1391,87,0	0/0:10,0:10:30.10:0,30,418
chr10	106931909	.	AGGT	A	316.62	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.279;DP=707;FS=0.000;HRun=0;HaplotypeScore=98.8762;InbreedingCoeff=0.9827;MQ=88.27;MQ0=0;MQRankSum=-3.034;QD=28.78;ReadPosRankSum=0.089;VQSLOD=3.3856;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,138,3129	1/1:0,11:11:27.01:411,27,0	0/0:25,0:25:69.22:0,69,1544	0/0:25,0:25:72.21:0,72,1487	0/0:33,0:33:99:0,99,2214	0/0:24,0:24:72.23:0,72,1653	0/0:25,0:25:75.24:0,75,1702	0/0:33,0:33:96.32:0,96,2208	0/0:24,0:24:72.24:0,72,1629	0/0:29,0:29:87.30:0,87,2027	0/0:12,0:12:30.10:0,30,677	0/0:28,0:28:84.28:0,84,1916	0/0:20,0:20:60.19:0,60,1365	0/0:27,0:27:81.25:0,81,1800	0/0:25,0:25:75.26:0,75,1765	0/0:11,0:11:33.11:0,33,780	0/0:44,0:44:99:0,126,2978	0/0:27,0:27:75.26:0,75,1774	0/0:21,0:21:60.21:0,60,1398	0/0:15,0:15:45.15:0,45,1063	0/0:54,0:54:99:0,154,3545	0/0:21,0:21:57.20:0,57,1346	0/0:19,0:19:57.18:0,57,1271	0/0:27,0:27:81.27:0,81,1869	0/0:22,0:22:66.23:0,66,1550	0/0:29,0:29:87.29:0,87,1997	0/0:21,0:21:63.22:0,63,1483	0/0:5,0:5:15.05:0,15,355
chr10	106937723	.	CA	C	874.28	PASS	AB=0.824;AC=15;AF=0.268;AN=56;BaseQRankSum=4.228;DP=567;FS=1.472;HRun=14;HaplotypeScore=67.9635;InbreedingCoeff=0.5214;MQ=70.28;MQ0=2;MQRankSum=1.605;QD=4.51;ReadPosRankSum=0.207;VQSLOD=1.5352;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,4:34:11.33:11,0,479	1/1:3,8:11:17.83:123,18,0	0/0:21,0:13:14.22:0,14,114	0/0:22,0:16:20.58:0,21,148	0/0:15,1:18:6.75:0,7,324	0/0:15,0:16:29.99:0,30,270	0/1:11,2:13:5.18:5,0,233	1/1:7,14:22:15.77:244,16,0	0/1:18,1:20:1.84:2,0,260	0/0:17,2:19:9.44:0,9,226	0/0:14,2:18:3.57:0,4,288	0/0:9,0:19:20.16:0,20,117	0/0:15,0:15:32.89:0,33,281	0/1:15,3:18:6.92:7,0,201	0/0:19,2:21:12.38:0,12,238	0/0:29,2:31:21.86:0,22,474	0/0:30,1:31:51.31:0,51,601	0/0:13,0:13:30:0,30,268	1/1:5,10:18:25.19:222,25,0	1/1:10,14:26:17.43:194,17,0	0/1:4,5:11:11.91:57,0,12	0/0:14,1:18:18.09:0,18,273	0/0:24,2:28:15.69:0,16,404	0/0:13,1:15:2:0,2,151	0/0:22,2:25:28.43:0,28,364	0/0:27,2:30:27.76:0,28,516	1/1:10,10:20:26.70:185,27,0	0/0:11,1:13:12.31:0,12,239
chr10	106937920	.	CT	C	917.63	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.677;DP=738;FS=4.884;HRun=2;HaplotypeScore=68.4919;InbreedingCoeff=0.9955;MQ=67.58;MQ0=0;MQRankSum=-2.271;QD=31.64;ReadPosRankSum=0.480;VQSLOD=3.2086;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1640	0/0:10,0:10:30.10:0,30,450	0/0:25,0:23:63.66:0,64,925	0/0:18,0:18:45.09:0,45,610	0/0:27,0:27:81.27:0,81,1209	0/0:25,0:25:72.24:0,72,1078	0/0:27,0:27:81.27:0,81,1212	0/0:37,0:37:99:0,105,1538	0/0:25,0:25:75.25:0,75,1123	0/0:25,0:25:75.25:0,75,1118	0/0:24,0:24:69.13:0,69,1031	1/1:0,29:29:78.25:1013,78,0	0/0:17,0:17:51.17:0,51,763	0/0:29,0:29:87.28:0,87,1284	0/0:31,0:31:93.30:0,93,1374	0/0:31,0:31:93.30:0,93,1372	0/0:16,0:16:48.16:0,48,717	0/0:25,0:25:72.24:0,72,1079	0/0:28,0:27:81.26:0,81,1178	0/0:31,0:31:93.29:0,93,1338	0/0:36,0:36:99:0,102,1480	0/0:30,0:30:90.29:0,90,1329	0/0:17,0:17:51.16:0,51,744	0/0:37,0:37:99:0,108,1617	0/0:31,0:31:93.23:0,93,1295	0/0:38,0:38:99:0,114,1672	0/0:24,0:24:72.21:0,72,1021	0/0:7,0:7:21.07:0,21,302
chr10	106938281	.	GAC	G	730.58	PASS	AB=0.897;AC=28;AF=0.538;AN=52;BaseQRankSum=5.003;DP=554;FS=3.030;HRun=0;HaplotypeScore=71.9329;InbreedingCoeff=-0.2373;MQ=73.08;MQ0=10;MQRankSum=-1.160;QD=1.74;ReadPosRankSum=0.531;VQSLOD=1.2143;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,1:41:11.39:11,0,267	1/1:2,0:4:2.84:14,3,0	./.	./.	0/0:13,0:13:11.73:0,12,135	0/0:16,0:16:15.01:0,15,175	0/1:20,1:21:11.68:12,0,219	0/1:17,0:16:0:0,0,0	0/1:16,4:21:25.35:25,0,160	0/0:27,0:26:21.64:0,22,251	0/0:8,0:9:15.02:0,15,182	0/1:9,7:17:20.36:184,0,20	0/1:14,0:14:29.95:30,0,117	0/1:21,0:21:11.59:12,0,208	0/1:18,4:23:48.58:49,0,255	0/1:21,0:21:64.44:64,0,215	0/1:19,6:26:99:104,0,291	0/1:28,1:29:60.41:60,0,281	1/1:15,0:17:4.40:18,4,0	1/1:8,0:9:5.68:28,6,0	1/1:20,0:31:0.47:1,0,0	0/1:9,1:10:17.41:17,0,70	0/1:10,1:11:23.22:23,0,78	0/1:22,2:24:66.67:67,0,225	1/1:6,0:18:17.04:84,17,0	0/1:12,0:12:0.86:1,0,126	1/1:11,0:17:7.80:41,8,0	0/1:4,4:8:32.05:37,0,32
chr10	106938396	.	C	CT	6100.45	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-13.993;DP=700;FS=6.937;HRun=0;HaplotypeScore=65.8047;InbreedingCoeff=0.9785;MQ=98.47;MQ0=0;MQRankSum=-1.821;QD=44.53;ReadPosRankSum=-0.974;VQSLOD=4.5945;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.30:0,90,1256	1/1:2,0:2:6.02:90,6,0	0/0:29,0:30:84.18:0,84,1062	0/0:43,0:43:99:0,117,1529	0/0:22,0:21:63.21:0,63,880	0/0:16,0:16:45.15:0,45,629	0/0:30,0:29:87.29:0,87,1216	1/1:0,24:24:72.22:1095,72,0	0/0:25,0:25:75.23:0,75,1031	0/0:29,0:29:87.25:0,87,1182	0/0:16,0:16:42.13:0,42,571	0/0:30,0:30:90.30:0,90,1257	0/0:30,0:30:87.27:0,87,1195	0/0:39,0:39:99:0,114,1555	0/0:18,0:18:51.16:0,51,690	0/0:26,0:26:78.26:0,78,1090	0/0:32,0:32:93.29:0,93,1280	0/0:27,0:26:81.23:0,81,1109	1/1:2,19:21:63.20:983,63,0	1/1:0,17:17:48.16:767,48,0	1/1:2,54:56:99:2349,148,0	0/0:18,0:18:54.18:0,54,755	0/0:20,0:20:57.18:0,57,780	0/0:27,0:27:78.26:0,78,1090	0/0:22,0:22:66.22:0,66,922	0/0:20,0:20:57.19:0,57,796	1/1:0,17:17:51.17:815,51,0	0/0:12,0:12:36.12:0,36,501
chr10	106939461	.	TCCCCC	T	10604.14	PASS	AB=0.778;AC=51;AF=0.911;AN=56;BaseQRankSum=-0.840;DP=396;FS=3.228;HRun=5;HaplotypeScore=101.5075;InbreedingCoeff=0.5266;MQ=42.49;MQ0=12;MQRankSum=-1.112;QD=38.01;ReadPosRankSum=4.447;VQSLOD=1.1920;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,8:9:13.23:211,13,0	1/1:0,1:4:9.03:184,9,0	0/0:62,0:15:22.70:0,23,734	0/0:55,0:13:14.93:0,15,431	1/1:4,6:12:27.02:460,27,0	1/1:2,6:8:17.95:287,18,0	1/1:3,6:9:23.98:404,24,0	1/1:1,9:19:0.17:865,0,0	0/1:5,2:7:35.58:205,0,36	1/1:7,10:16:44.96:731,45,0	1/1:2,3:7:18.01:267,18,0	1/1:1,5:9:15:248,15,0	1/1:2,7:11:27.09:474,27,0	1/1:0,0:2:3.01:37,3,0	1/1:1,7:8:21.02:371,21,0	1/1:4,8:12:29.98:477,30,0	1/1:9,5:13:32.56:351,33,0	1/1:4,6:10:24.04:366,24,0	1/1:0,10:14:42.14:856,42,0	1/1:1,2:9:27.09:483,27,0	1/1:0,2:2:3.01:65,3,0	1/1:2,1:4:8.98:118,9,0	1/1:1,6:9:12.04:183,12,0	1/1:3,2:5:6.30:35,6,0	1/1:5,12:19:48:776,48,0	1/1:9,14:23:59.98:1000,60,0	1/1:1,5:13:39.13:714,39,0	1/1:1,8:11:21.07:437,21,0
chr10	106939480	.	CT	C	951.68	PASS	AB=0.968;AC=13;AF=0.232;AN=56;BaseQRankSum=-2.211;DP=460;FS=1.276;HRun=6;HaplotypeScore=120.6465;InbreedingCoeff=0.7657;MQ=34.02;MQ0=29;MQRankSum=-0.139;QD=6.30;ReadPosRankSum=-1.107;VQSLOD=-0.0695;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:11:11.40:0,11,110	1/1:5,1:6:9.81:74,10,0	0/1:58,1:10:21.43:21,0,120	0/0:52,1:12:2.50:0,2,9	0/0:15,0:15:20.76:0,21,215	0/0:11,0:10:18.01:0,18,194	0/0:14,0:12:26.88:0,27,280	1/1:21,10:28:28.39:334,28,0	0/0:8,0:8:17.57:0,18,168	0/0:17,0:16:35.81:0,36,423	0/0:11,0:10:14.88:0,15,135	0/0:10,0:10:16.23:0,16,128	0/0:14,0:13:24.24:0,24,220	0/0:5,0:5:8.65:0,9,50	0/0:8,0:8:17.66:0,18,157	0/0:12,0:12:26.57:0,27,222	0/0:17,0:15:11.29:0,11,291	0/0:21,0:15:35.32:0,35,330	1/1:11,9:18:14.69:281,15,0	1/1:4,3:7:12.81:123,13,0	1/1:2,3:4:5.30:60,5,0	0/0:5,0:5:12.03:0,12,137	0/0:14,0:13:23.83:0,24,246	0/0:9,0:6:5.88:0,6,52	0/0:19,0:18:33.47:0,33,316	0/0:21,0:20:46.02:0,46,432	1/1:13,8:19:14.69:234,15,0	0/0:11,0:11:19.53:0,20,184
chr10	106939694	.	T	TA	5114.92	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-10.599;DP=500;FS=13.135;HRun=0;HaplotypeScore=50.3193;InbreedingCoeff=0.9954;MQ=84.49;MQ0=0;MQRankSum=0.944;QD=43.35;ReadPosRankSum=-1.614;VQSLOD=3.3499;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1825	1/1:0,7:7:21.07:335,21,0	0/0:19,0:19:51.14:0,51,676	0/0:17,0:17:49:0,49,611	0/0:20,0:20:60.16:0,60,789	0/0:13,0:13:39.13:0,39,542	0/0:13,0:13:36.12:0,36,503	1/1:0,35:34:99:1608,105,0	0/0:11,0:11:33.07:0,33,434	0/0:18,0:18:51.15:0,51,682	0/0:14,0:14:42.14:0,42,586	0/0:16,0:16:48.16:0,48,668	0/0:18,0:17:51.17:0,51,711	0/0:11,0:11:33.04:0,33,436	0/0:20,0:20:60.20:0,60,838	0/0:20,0:20:57.18:0,57,778	0/0:32,0:32:93.28:0,93,1264	0/0:19,0:19:54.12:0,54,712	1/1:0,9:9:27.09:426,27,0	1/1:0,22:22:63.15:974,63,0	1/1:1,25:26:69.24:1102,69,0	0/0:11,0:11:29.97:0,30,392	0/0:10,0:10:30.07:0,30,383	0/0:15,0:15:42.12:0,42,568	0/0:15,0:15:45.15:0,45,629	0/0:20,0:20:57.18:0,57,781	1/1:0,19:17:42.14:670,42,0	0/0:5,0:5:15.05:0,15,210
chr10	106939842	.	C	CT	1461.90	PASS	AB=0.808;AC=13;AF=0.232;AN=56;BaseQRankSum=-7.672;DP=457;FS=8.617;HRun=13;HaplotypeScore=57.6889;InbreedingCoeff=0.5975;MQ=72.12;MQ0=3;MQRankSum=0.942;QD=10.37;ReadPosRankSum=-3.080;VQSLOD=1.5612;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:30:63.95:0,64,437	0/0:7,0:8:19.88:0,20,129	0/0:15,0:13:7.94:0,8,46	0/0:7,0:6:0.78:0,1,2	0/0:16,1:18:2.03:0,2,214	0/0:15,1:17:15.86:0,16,245	0/0:17,0:19:48.70:0,49,320	1/1:12,22:35:24.23:525,24,0	0/0:14,0:16:30.80:0,31,196	0/1:20,2:22:8:8,0,240	0/0:9,0:9:20.74:0,21,143	1/1:2,12:14:3.50:175,3,0	0/0:13,0:13:32.65:0,33,226	0/0:9,0:9:11.83:0,12,82	0/0:16,0:17:40.68:0,41,273	0/0:17,0:17:44.58:0,45,306	0/0:34,0:34:86.17:0,86,596	0/0:18,0:18:38.64:0,39,267	0/1:6,9:16:29.23:209,0,29	1/1:0,12:12:30.03:279,30,0	1/1:2,11:13:27.03:251,27,0	0/0:8,0:8:10.93:0,11,68	0/1:10,2:13:23.88:24,0,138	0/0:15,0:16:31.74:0,32,211	0/0:8,0:8:23.79:0,24,163	0/0:21,0:21:44.56:0,45,308	1/1:5,11:16:18.02:165,18,0	0/0:12,0:12:26.68:0,27,182
chr10	106940041	.	TTGTGTGTG	T	2443.24	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.653;DP=651;FS=12.604;HRun=0;HaplotypeScore=163.0315;InbreedingCoeff=0.9551;MQ=63.70;MQ0=3;MQRankSum=-7.501;QD=23.05;ReadPosRankSum=-3.019;VQSLOD=1.8986;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:48:99:0,108,3637	0/0:5,0:7:9.03:0,9,187	0/0:32,0:18:7.27:0,7,201	0/0:27,0:18:20.02:0,20,872	0/0:30,0:30:54.19:0,54,2151	0/0:32,0:34:78.24:0,78,2788	0/0:20,0:23:51.18:0,51,1941	1/1:16,7:24:27.09:619,27,0	0/0:21,0:27:66.23:0,66,2413	0/0:21,0:22:45.15:0,45,1639	0/0:13,0:14:33.10:0,33,1086	0/0:4,0:20:45.14:0,45,962	0/0:16,0:16:33.11:0,33,1296	0/0:19,0:24:60.08:0,60,2209	0/0:23,0:23:57.18:0,57,2108	0/0:22,0:27:63.22:0,63,2247	0/0:17,0:18:42.08:0,42,1592	0/0:20,0:20:40.38:0,40,1457	1/1:12,6:17:15.11:340,15,0	1/1:7,17:23:42.01:785,42,0	1/1:16,7:23:11.95:157,12,0	0/0:25,0:26:57.17:0,57,2011	0/0:26,0:26:66.20:0,66,2415	0/0:22,0:26:54.17:0,54,1825	0/0:16,0:16:33.11:0,33,1277	0/0:20,0:24:51.18:0,51,1833	1/1:5,11:16:29.99:713,30,0	0/0:15,0:15:33.11:0,33,1350
chr10	106941007	.	GC	G	1241.87	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.641;DP=753;FS=14.029;HRun=2;HaplotypeScore=91.0769;InbreedingCoeff=0.9955;MQ=70.63;MQ0=1;MQRankSum=-1.105;QD=32.68;ReadPosRankSum=0.844;VQSLOD=2.2195;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1455	0/0:10,0:10:30.07:0,30,427	0/0:13,1:13:18:0,18,407	0/0:17,0:17:45.10:0,45,626	0/0:29,0:29:87.29:0,87,1303	0/0:20,0:20:60.19:0,60,879	0/0:33,0:33:96.25:0,96,1375	0/0:39,0:37:99:0,102,1485	0/0:26,0:26:75.24:0,75,1101	0/0:32,0:32:93.79:0,94,1390	0/0:21,0:21:63.21:0,63,944	0/0:32,0:32:90.30:0,90,1341	0/0:34,0:33:93.32:0,93,1394	0/0:25,0:24:72.23:0,72,1058	0/0:28,0:28:84.28:0,84,1256	0/0:39,0:39:99:0,117,1716	0/0:38,0:38:99:0,114,1683	0/0:36,0:35:99:0,102,1462	0/0:20,0:19:54.18:0,54,802	0/0:32,0:32:93.30:0,93,1374	0/0:29,0:29:87.29:0,87,1303	0/0:28,0:28:84.28:0,84,1259	0/0:26,0:26:78.25:0,78,1149	0/0:16,0:16:42.13:0,42,609	0/0:27,0:27:78.25:0,78,1150	1/1:0,22:22:66.21:857,66,0	0/0:29,0:29:81.25:0,81,1190	1/1:0,16:16:39.13:506,39,0
chr10	106943795	.	A	AAG	111.53	PASS	AB=0.800;AC=2;AF=0.036;AN=56;BaseQRankSum=4.557;DP=664;FS=11.942;HRun=0;HaplotypeScore=88.2327;InbreedingCoeff=-0.0271;MQ=50.64;MQ0=42;MQRankSum=-0.296;QD=1.33;ReadPosRankSum=0.914;VQSLOD=0.2097;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:92.24:0,92,715	0/1:5,8:15:23.08:186,0,23	0/0:83,0:13:8.24:0,8,143	0/1:69,0:14:1.85:2,0,107	0/0:22,0:21:53.62:0,54,432	0/0:18,0:18:53.89:0,54,458	0/0:14,0:14:28.41:0,28,173	0/0:30,0:30:65.26:0,65,500	0/0:21,0:20:45.66:0,46,389	0/0:22,0:22:62.03:0,62,504	0/0:19,0:19:48.70:0,49,380	0/0:13,0:12:21.55:0,22,151	0/0:10,0:9:19.39:0,19,147	0/0:12,0:12:32.81:0,33,281	0/0:15,0:15:40.33:0,40,282	0/0:15,0:15:41.84:0,42,348	0/0:29,0:29:75.83:0,76,609	0/0:27,0:25:65.45:0,65,547	0/0:18,0:18:49.62:0,50,388	0/0:24,0:23:54.93:0,55,370	0/0:13,0:12:23.95:0,24,214	0/0:10,0:10:20.33:0,20,144	0/0:15,0:15:38.68:0,39,288	0/0:17,0:17:45.14:0,45,383	0/0:23,0:23:55.51:0,56,412	0/0:29,0:29:68.39:0,68,635	0/0:26,0:25:27.11:0,27,211	0/0:18,0:14:38.95:0,39,350
chr10	106945037	.	G	GC	2598.68	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-9.700;DP=643;FS=1.527;HRun=7;HaplotypeScore=67.7215;InbreedingCoeff=0.9979;MQ=92.00;MQ0=0;MQRankSum=-1.759;QD=23.84;ReadPosRankSum=0.086;VQSLOD=3.8751;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:87.12:0,87,840	0/0:11,0:11:30.04:0,30,290	0/0:26,0:26:65.68:0,66,612	0/0:28,0:27:56.67:0,57,508	0/0:12,0:12:21.03:0,21,203	0/0:32,0:32:84.10:0,84,800	0/0:34,0:34:87.07:0,87,821	1/1:3,14:17:42.13:507,42,0	0/0:15,0:15:36.04:0,36,341	0/0:19,0:19:45.04:0,45,424	0/0:9,0:9:27.04:0,27,261	0/0:37,0:37:84.10:0,84,806	0/0:19,0:19:48.07:0,48,463	0/0:32,0:32:84.13:0,84,811	0/0:21,0:21:57.09:0,57,550	0/0:27,0:27:75.07:0,75,715	0/0:30,0:30:78.08:0,78,744	0/0:27,0:27:78.12:0,78,753	1/1:2,9:11:27.08:326,27,0	1/1:3,13:17:29.94:328,30,0	1/1:7,39:46:93.29:1123,93,0	0/0:19,0:19:45.06:0,45,434	0/0:11,0:11:27.04:0,27,260	0/0:34,0:34:81.12:0,81,782	0/0:19,0:19:51.08:0,51,492	0/0:23,0:23:60.08:0,60,577	1/1:4,14:18:42.09:491,42,0	0/0:11,0:11:30.05:0,30,290
chr10	106946729	.	C	CA	4647.13	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-12.404;DP=597;FS=14.080;HRun=8;HaplotypeScore=58.1542;InbreedingCoeff=0.9826;MQ=74.99;MQ0=1;MQRankSum=-1.717;QD=27.18;ReadPosRankSum=-2.599;VQSLOD=3.3486;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.01:0,78,709	0/0:6,0:6:15:0,15,137	0/0:19,0:19:45.01:0,45,407	0/0:20,0:19:17.47:0,17,306	0/0:21,1:22:19.41:0,19,432	0/0:22,0:22:57.01:0,57,517	0/0:16,0:16:48.01:0,48,435	1/1:6,32:38:90.17:991,90,0	0/0:20,0:20:60.03:0,60,549	0/0:21,0:21:63.03:0,63,576	0/0:13,0:13:33.02:0,33,302	1/1:4,12:17:11.48:368,11,0	0/0:20,0:20:57.02:0,57,522	0/0:16,0:16:45.02:0,45,412	0/0:24,0:24:69.04:0,69,631	0/0:29,0:29:78.01:0,78,704	0/0:28,0:28:75.04:0,75,686	0/0:10,0:10:20.98:0,21,187	1/1:4,14:20:47.97:534,48,0	1/1:2,14:16:39.03:420,39,0	1/1:4,47:51:99:1454,126,0	0/0:23,0:23:60.02:0,60,549	0/0:16,0:16:41.95:0,42,372	0/0:18,1:19:15.39:0,15,402	0/0:18,0:18:48.02:0,48,439	0/0:25,0:25:69.03:0,69,631	1/1:1,27:29:78.06:880,78,0	0/0:9,0:9:27.01:0,27,247
chr10	106951056	.	A	AT	82.24	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.098;DP=540;FS=6.172;HRun=11;HaplotypeScore=53.6958;InbreedingCoeff=0.8825;MQ=64.93;MQ0=1;MQRankSum=-0.822;QD=10.28;ReadPosRankSum=-1.315;VQSLOD=2.1479;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,2:35:19.70:0,20,513	1/1:1,7:8:18:173,18,0	0/0:11,0:10:13.96:0,14,98	0/0:5,0:4:8.01:0,8,52	0/0:22,0:22:59.74:0,60,460	0/0:22,1:23:21.89:0,22,343	0/0:13,0:13:35.86:0,36,279	0/0:33,0:33:74.66:0,75,578	0/0:7,0:8:22.96:0,23,169	0/0:16,0:16:41.83:0,42,325	0/0:15,0:15:18.83:0,19,238	0/0:27,1:30:30.36:0,30,397	0/0:19,0:19:23.94:0,24,314	0/0:12,0:12:26.86:0,27,202	0/0:29,0:29:68.68:0,69,527	0/0:27,0:27:56.74:0,57,436	0/0:18,0:18:42.21:0,42,323	0/0:26,0:26:65.52:0,66,507	0/0:13,0:15:20.39:0,20,146	0/0:23,0:23:59.75:0,60,464	0/0:14,0:14:26.60:0,27,202	0/0:17,0:17:41.82:0,42,325	0/0:19,0:19:41.77:0,42,322	0/0:11,0:11:23.89:0,24,184	0/0:23,0:23:47.77:0,48,371	0/0:26,0:26:56.74:0,57,439	0/0:28,0:28:68.64:0,69,527	0/0:13,0:12:26.88:0,27,209
chr10	106951578	.	A	AGTT	10532.56	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-14.725;DP=860;FS=3.744;HRun=0;HaplotypeScore=109.9778;InbreedingCoeff=0.9981;MQ=79.22;MQ0=0;MQRankSum=-7.611;QD=59.17;ReadPosRankSum=-1.236;VQSLOD=6.1170;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,2245	0/0:15,0:15:45.15:0,45,764	0/0:16,0:16:39.09:0,39,610	0/0:28,0:28:80.84:0,81,1273	0/0:24,0:24:69.24:0,69,1166	0/0:32,0:32:90.29:0,90,1504	0/0:23,0:23:66.21:0,66,1098	1/1:6,46:53:99:3283,153,0	0/0:35,0:35:99:0,99,1659	0/0:36,0:36:99:0,108,1794	0/0:25,0:25:72.25:0,72,1221	0/0:39,0:39:99:0,111,1893	0/0:43,0:43:99:0,129,2197	0/0:29,0:29:84.29:0,84,1427	0/0:45,0:45:99:0,129,2144	0/0:49,0:49:99:0,144,2449	0/0:25,0:25:75.24:0,75,1235	0/0:19,0:19:54.16:0,54,892	1/1:0,23:23:69.24:1590,69,0	1/1:4,31:36:87.30:2000,87,0	1/1:2,27:29:66.23:1517,66,0	0/0:23,0:23:63.22:0,63,1063	0/0:21,0:21:60.21:0,60,1017	0/0:30,0:30:90.31:0,90,1535	0/0:33,0:33:96.29:0,96,1545	0/0:40,0:40:99:0,117,1991	1/1:3,34:36:93.32:2144,93,0	0/0:7,0:7:18.06:0,18,303
chr10	106952395	.	ACT	A	5082.50	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.404;DP=634;FS=0.370;HRun=0;HaplotypeScore=81.0310;InbreedingCoeff=0.9989;MQ=83.33;MQ0=0;MQRankSum=-2.772;QD=40.99;ReadPosRankSum=0.073;VQSLOD=6.4693;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,2259	0/0:7,0:7:21.07:0,21,393	0/0:27,0:27:78.24:0,78,1388	0/0:17,0:17:44.84:0,45,666	0/0:30,0:30:87.30:0,87,1604	0/0:21,0:21:63.22:0,63,1168	0/0:27,0:27:72.23:0,72,1307	1/1:3,25:28:75.24:1084,75,0	0/0:18,0:18:54.19:0,54,1011	0/0:19,0:19:57.20:0,57,1058	0/0:23,0:23:69.24:0,69,1292	0/0:39,0:39:99:0,114,2124	0/0:23,0:23:63.22:0,63,1180	0/0:18,0:18:54.19:0,54,1012	0/0:25,0:25:72.25:0,72,1349	0/0:31,0:31:93.32:0,93,1725	0/0:22,0:22:66.23:0,66,1224	0/0:11,0:11:33.07:0,33,574	1/1:0,28:28:84.26:1198,84,0	1/1:0,17:17:48.13:684,48,0	1/1:0,20:20:54.18:795,54,0	0/0:17,0:17:51.17:0,51,955	0/0:22,0:22:66.23:0,66,1225	0/0:20,0:20:60.19:0,60,1092	0/0:10,0:10:30.10:0,30,562	0/0:25,0:25:75.26:0,75,1405	1/1:1,30:31:90.30:1321,90,0	0/0:16,0:16:48.16:0,48,864
chr10	106952410	.	GTTT	G	1320.32	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.328;DP=618;FS=8.249;HRun=8;HaplotypeScore=103.0290;InbreedingCoeff=0.9046;MQ=73.50;MQ0=2;MQRankSum=-2.941;QD=33.01;ReadPosRankSum=2.210;VQSLOD=2.2146;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,2508	0/0:5,0:5:15.05:0,15,327	0/0:25,0:24:60.21:0,60,1230	0/0:16,0:14:32.90:0,33,601	0/0:23,0:23:66.23:0,66,1440	0/0:25,0:25:72.23:0,72,1524	0/0:24,0:25:75.24:0,75,1575	0/0:27,0:27:72.23:0,72,1457	0/0:17,0:17:48.16:0,48,1047	0/0:15,0:15:42.14:0,42,916	0/0:19,0:19:57.20:0,57,1228	1/1:5,35:40:96.32:1415,96,0	0/0:20,0:20:57.20:0,57,1224	0/0:16,1:17:6.95:0,7,1003	0/0:24,0:24:72.25:0,72,1571	0/0:39,0:39:99:0,114,2481	0/0:22,0:22:66.23:0,66,1437	0/0:16,0:16:32.46:0,32,655	0/0:28,0:28:72.24:0,72,1507	0/0:19,0:18:54.17:0,54,1123	0/0:16,0:16:39.13:0,39,850	0/0:20,0:20:57.19:0,57,1204	0/0:22,0:22:63.20:0,63,1334	0/0:20,0:20:54.19:0,54,1177	0/0:9,0:9:27.09:0,27,588	0/0:27,0:27:75.26:0,75,1606	0/0:30,0:29:87.29:0,87,1834	0/0:12,0:12:36.12:0,36,783
chr10	106952936	.	CT	C	4904.88	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.477;DP=676;FS=8.407;HRun=3;HaplotypeScore=62.5715;InbreedingCoeff=0.9999;MQ=85.55;MQ0=0;MQRankSum=-3.147;QD=33.37;ReadPosRankSum=-0.254;VQSLOD=4.8615;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:45.14:0,45,628	0/0:18,0:18:51.17:0,51,732	0/0:28,0:28:78.21:0,78,1048	0/0:15,0:15:42.11:0,42,562	0/0:27,0:27:78.22:0,78,1063	0/0:23,0:23:66.21:0,66,934	0/0:26,0:26:78.21:0,78,1066	1/1:4,31:35:93.23:1094,93,0	0/0:19,0:19:54.18:0,54,776	0/0:15,0:15:45.15:0,45,647	0/0:28,0:28:81.27:0,81,1166	0/0:30,0:30:87.25:0,87,1192	0/0:25,0:25:75.25:0,75,1076	0/0:21,0:21:63.19:0,63,888	0/0:41,0:41:99:0,123,1770	0/0:34,0:34:99:0,99,1370	0/0:12,0:12:33.06:0,33,432	0/0:25,0:25:72.24:0,72,1032	1/1:0,21:21:63.20:781,63,0	1/1:1,37:38:99:1357,111,0	1/1:0,21:21:51.16:632,51,0	0/0:19,0:19:57.19:0,57,821	0/0:24,0:24:69.23:0,69,992	0/0:12,0:12:33.11:0,33,475	0/0:19,0:19:57.19:0,57,821	0/0:38,0:38:99:0,111,1597	1/1:1,31:32:84.16:1041,84,0	0/0:15,0:15:42.14:0,42,605
chr10	106953773	.	G	GT	3104.03	PASS	AB=0.880;AC=11;AF=0.196;AN=56;BaseQRankSum=-5.872;DP=674;FS=4.647;HRun=10;HaplotypeScore=77.0693;InbreedingCoeff=0.8808;MQ=64.90;MQ0=0;MQRankSum=-2.666;QD=18.15;ReadPosRankSum=-2.793;VQSLOD=3.2998;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:19:40.02:0,40,307	0/0:9,0:9:20.96:0,21,172	0/0:16,0:14:34.65:0,35,239	0/0:11,0:11:14.89:0,15,117	0/0:26,1:28:38.94:0,39,515	0/0:25,1:27:38.97:0,39,516	0/0:8,0:8:20.98:0,21,172	1/1:13,22:35:66.09:668,66,0	0/0:19,0:19:53.93:0,54,443	0/0:33,0:33:83.88:0,84,690	0/0:24,0:24:56.93:0,57,468	0/0:32,0:32:55.58:0,56,658	0/0:21,0:21:36.65:0,37,440	0/0:20,0:20:56.92:0,57,465	0/0:33,0:34:85.89:0,86,689	0/0:29,0:29:64.45:0,64,521	0/0:31,0:31:80.87:0,81,662	0/0:21,0:21:41.88:0,42,340	1/1:13,19:32:60.10:619,60,0	1/1:8,34:43:77.71:1013,78,0	1/1:6,10:16:33.04:340,33,0	0/0:18,0:19:46.96:0,47,374	0/0:26,0:26:53.91:0,54,443	0/1:16,3:22:35.90:36,0,327	0/0:28,0:29:79.94:0,80,643	0/0:29,0:31:70.91:0,71,570	1/1:5,18:23:60.06:608,60,0	0/0:16,0:16:20.38:0,20,292
chr10	106953821	.	CTT	C	2530.81	PASS	AB=0.923;AC=11;AF=0.196;AN=56;BaseQRankSum=7.713;DP=624;FS=1.388;HRun=11;HaplotypeScore=86.7006;InbreedingCoeff=0.9350;MQ=74.61;MQ0=0;MQRankSum=-2.102;QD=20.92;ReadPosRankSum=-0.963;VQSLOD=3.0169;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.21:0,63,957	0/0:9,0:9:24.08:0,24,369	0/0:26,1:25:15.33:0,15,357	0/1:11,0:8:0.07:0,0,117	0/0:29,0:29:72.22:0,72,1066	0/0:23,0:24:72.24:0,72,1090	0/0:10,0:10:24.08:0,24,369	1/1:11,13:25:51.08:542,51,0	0/0:16,0:17:41.63:0,42,607	0/0:24,0:25:62.70:0,63,932	0/0:23,0:23:57.19:0,57,877	0/0:29,0:31:83.22:0,83,1147	0/0:15,0:16:48.13:0,48,679	0/0:18,0:20:48.11:0,48,674	0/0:18,0:21:56.65:0,57,780	0/0:29,1:32:57.33:0,57,1200	0/0:34,0:36:95.17:0,95,1294	0/0:25,0:29:73.66:0,74,983	1/1:9,12:21:45.08:479,45,0	1/1:7,25:32:75.13:798,75,0	1/1:1,6:7:18.04:192,18,0	0/0:19,0:22:63.19:0,63,908	0/0:18,0:19:50.66:0,51,747	0/0:23,0:23:63.15:0,63,901	0/0:21,0:22:57.18:0,57,840	0/0:19,0:19:42.12:0,42,606	1/1:2,22:24:66.15:693,66,0	0/0:25,0:25:63.21:0,63,969
chr10	106954655	.	TC	T	50.15	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.493;DP=699;FS=4.335;HRun=5;HaplotypeScore=66.8194;InbreedingCoeff=0.9669;MQ=89.13;MQ0=0;MQRankSum=-1.724;QD=8.36;ReadPosRankSum=0.783;VQSLOD=0.0668;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,1500	1/1:2,4:6:12.03:136,12,0	0/0:30,0:30:80.55:0,81,992	0/0:22,0:22:60.13:0,60,763	0/0:27,0:27:78.22:0,78,1017	0/0:20,0:20:57.14:0,57,719	0/0:21,0:21:63.19:0,63,842	0/0:31,0:31:84.25:0,84,1100	0/0:19,0:19:54.14:0,54,692	0/0:28,0:28:78.25:0,78,1055	0/0:15,0:15:42.14:0,42,571	0/0:33,0:33:87.27:0,87,1158	0/0:35,0:35:99:0,102,1371	0/0:27,0:27:72.21:0,72,938	0/0:44,0:44:99:0,126,1676	0/0:44,0:44:99:0,129,1733	0/0:34,0:34:99:0,99,1293	0/0:12,0:12:30.10:0,30,410	0/0:18,0:18:51.17:0,51,688	0/0:23,0:23:69.22:0,69,921	0/0:25,0:25:72.24:0,72,983	0/0:20,0:20:54.16:0,54,708	0/0:10,0:10:27.09:0,27,366	0/0:30,0:30:87.25:0,87,1142	0/0:22,0:22:60.19:0,60,804	0/0:21,0:21:60.17:0,60,783	0/0:30,0:30:90.27:0,90,1197	0/0:12,0:12:36.12:0,36,491
chr10	106954988	.	A	AAG	167.26	PASS	AB=0.933;AC=15;AF=0.268;AN=56;BaseQRankSum=1.090;DP=351;FS=13.911;HRun=0;HaplotypeScore=86.2703;InbreedingCoeff=-0.2456;MQ=69.83;MQ0=13;MQRankSum=0.892;QD=0.97;ReadPosRankSum=1.376;VQSLOD=0.4857;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:8.61:9,0,82	0/1:1,0:1:0:0,0,0	0/0:68,0:14:6.35:0,6,64	0/1:66,0:22:44.07:44,0,48	0/0:11,1:12:7.78:0,8,70	0/0:3,0:4:4.50:0,5,38	0/1:8,0:9:1.75:2,0,120	0/0:13,0:13:10.17:0,10,39	0/1:3,2:6:16.76:33,0,17	0/0:8,0:8:8.58:0,9,70	0/1:6,0:7:15.14:15,0,32	0/0:8,0:10:19.63:0,20,89	0/1:9,0:10:8.61:9,0,48	0/0:11,0:11:20.88:0,21,191	0/1:13,1:17:67.56:85,0,68	0/0:9,0:9:0.40:0,0,82	0/0:10,0:10:4.80:0,5,93	0/1:4,0:4:16.45:36,0,16	0/1:3,0:3:1.53:2,0,7	0/0:8,0:8:7.37:0,7,23	0/1:4,0:4:2.35:9,0,2	0/1:8,0:8:13.25:13,0,44	0/0:8,0:8:5.26:0,5,32	0/0:7,0:7:0.06:0,0,102	0/1:10,0:10:12.14:12,0,50	0/1:4,1:5:4.83:26,0,5	0/0:9,0:9:12.27:0,12,48	0/1:6,0:6:6.15:6,0,33
chr10	106954996	.	GGGGAGA	G	707.61	PASS	AB=0.982;AC=11;AF=0.196;AN=56;BaseQRankSum=2.823;DP=303;FS=24.301;HRun=0;HaplotypeScore=72.7097;InbreedingCoeff=0.6534;MQ=73.52;MQ0=11;MQRankSum=-3.283;QD=7.53;ReadPosRankSum=1.186;VQSLOD=-0.3806;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:35.79:0,36,803	0/0:1,0:1:3.01:0,3,99	0/0:52,0:10:20.30:0,20,346	0/1:52,0:19:10.59:11,0,323	0/0:10,0:10:15.05:0,15,324	0/0:5,0:5:12.04:0,12,309	0/0:13,0:13:24.06:0,24,535	1/1:9,3:12:14.98:296,15,0	0/0:5,0:5:9.03:0,9,187	0/0:10,0:10:18.06:0,18,416	0/0:4,0:4:9.03:0,9,252	0/0:10,0:10:21.05:0,21,424	0/0:8,0:8:18.06:0,18,510	0/0:8,0:8:15.05:0,15,453	0/0:11,0:11:20.59:0,21,416	0/0:9,0:9:21.07:0,21,473	0/0:7,0:7:12.04:0,12,340	0/0:2,0:2:6.02:0,6,134	1/1:5,0:5:12:166,12,0	1/1:7,1:8:12.04:238,12,0	1/1:5,0:5:1.55:4,2,0	0/0:6,0:6:6.02:0,6,159	0/0:5,0:5:6.02:0,6,146	0/0:7,0:7:18.06:0,18,376	0/0:6,0:6:5.78:0,6,127	0/0:6,0:6:8.96:0,9,144	1/1:7,3:10:11.76:147,12,0	0/0:6,0:6:18.06:0,18,460
chr10	106956195	.	C	CGCT	2316.89	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=-4.331;DP=321;FS=0.000;HRun=0;HaplotypeScore=55.1937;InbreedingCoeff=0.6177;MQ=66.78;MQ0=0;MQRankSum=-0.119;QD=26.63;ReadPosRankSum=-2.038;VQSLOD=3.0261;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:27.06:0,27,393	1/1:1,2:3:6.02:132,6,0	0/1:4,0:4:27.37:27,0,61	0/0:3,0:3:9.03:0,9,125	0/0:5,0:5:3.01:0,3,48	0/0:1,0:1:3.01:0,3,48	0/0:35,0:35:93.21:0,93,1412	1/1:1,3:4:9.02:157,9,0	0/0:9,0:9:27.05:0,27,395	0/0:10,0:10:24.07:0,24,346	0/0:2,0:2:6.02:0,6,96	0/0:9,0:9:24.08:0,24,380	0/0:12,0:12:33.10:0,33,508	0/0:16,0:16:45.15:0,45,722	0/0:13,0:13:33.06:0,33,477	0/0:4,0:4:9.03:0,9,145	0/0:15,0:15:45.14:0,45,698	0/0:27,0:27:78.27:0,78,1251	1/1:1,6:9:24.01:338,24,0	./.	1/1:12,52:66:80.98:1754,81,0	0/0:3,0:3:3.01:0,3,48	0/0:4,0:4:5.99:0,6,69	0/0:34,0:34:87.22:0,87,1347	0/0:7,0:7:18.03:0,18,260	0/0:9,0:9:21.02:0,21,288	1/1:1,0:1:3.01:65,3,0	0/0:1,0:1:3.01:0,3,48
chr10	106957519	.	C	CTCG	7353.21	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.303;DP=509;FS=4.969;HRun=0;HaplotypeScore=74.5230;InbreedingCoeff=0.9970;MQ=77.40;MQ0=0;MQRankSum=-3.849;QD=54.47;ReadPosRankSum=1.269;VQSLOD=6.8522;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.29:0,90,1496	1/1:2,8:10:24.08:549,24,0	0/0:12,0:12:36.05:0,36,569	0/0:12,0:12:33.07:0,33,496	0/0:10,0:10:27.09:0,27,457	0/0:20,0:20:60.19:0,60,996	0/0:40,0:40:99:0,120,2017	1/1:3,15:18:54.16:1117,54,0	0/0:14,0:14:42.14:0,42,712	0/0:17,0:17:48.16:0,48,793	0/0:10,0:10:30.10:0,30,508	0/0:23,0:23:69.24:0,69,1177	0/0:12,0:12:33.11:0,33,557	0/0:16,0:16:48.16:0,48,789	0/0:14,0:14:42.14:0,42,716	0/0:11,0:11:33.11:0,33,556	0/0:26,0:26:75.20:0,75,1207	0/0:17,0:17:51.15:0,51,826	1/1:4,10:14:39.11:806,39,0	1/1:0,12:12:24.08:552,24,0	1/1:5,59:66:99:3308,144,0	0/0:9,0:9:21.07:0,21,357	0/0:14,0:14:39.13:0,39,661	0/0:20,0:20:54.16:0,54,890	0/0:22,0:22:60.17:0,60,969	0/0:18,0:18:54.18:0,54,895	1/1:1,14:15:45.15:1022,45,0	0/0:7,0:7:21.07:0,21,358
chr10	106958226	.	CT	C	151.63	PASS	AB=0.911;AC=4;AF=0.071;AN=56;BaseQRankSum=5.915;DP=679;FS=4.174;HRun=11;HaplotypeScore=75.9450;InbreedingCoeff=0.4295;MQ=76.84;MQ0=0;MQRankSum=-1.499;QD=2.71;ReadPosRankSum=1.710;VQSLOD=-0.5588;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,3:48:83.51:0,84,1203	1/1:3,12:15:8.04:221,8,0	0/1:18,2:18:25.47:25,0,220	0/0:22,1:26:22.61:0,23,372	0/0:21,1:23:38.32:0,38,582	0/0:30,1:31:56.54:0,57,788	0/0:23,0:23:60.12:0,60,622	0/0:32,0:33:66.02:0,66,674	0/0:24,1:25:30.72:0,31,508	0/0:22,0:23:44.95:0,45,462	0/0:18,1:19:24.40:0,24,446	0/0:18,1:19:17.45:0,17,384	0/1:18,2:20:4.25:4,0,326	0/0:12,0:13:32.90:0,33,322	0/0:31,0:32:60:0,60,751	0/0:43,1:44:89.61:0,90,1137	0/0:24,0:24:57.12:0,57,594	0/0:32,1:34:47:0,47,830	0/0:14,0:16:32.72:0,33,301	0/0:18,0:18:39.09:0,39,410	0/0:20,2:22:10.82:0,11,503	0/0:21,0:21:48.10:0,48,493	0/0:19,0:19:39.08:0,39,403	0/0:23,0:27:74.56:0,75,728	0/0:18,1:19:29.44:0,29,483	0/0:28,2:31:28.85:0,29,683	0/0:22,0:25:56.84:0,57,575	0/0:8,0:8:24.06:0,24,256
chr10	106959213	.	CCT	C	4353.43	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.312;DP=593;FS=16.265;HRun=0;HaplotypeScore=71.0829;InbreedingCoeff=0.9991;MQ=86.52;MQ0=3;MQRankSum=-0.530;QD=34.01;ReadPosRankSum=-2.403;VQSLOD=5.2302;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,2004	0/0:9,0:9:24.08:0,24,415	0/0:21,0:21:54.18:0,54,911	0/0:21,0:20:57.19:0,57,990	0/0:24,0:24:63.22:0,63,1109	0/0:27,0:27:81.26:0,81,1399	0/0:13,0:13:36.11:0,36,606	1/1:2,30:32:87.27:1178,87,0	0/0:19,0:19:54.18:0,54,947	0/0:17,0:17:48.16:0,48,834	0/0:16,0:16:48.10:0,48,811	0/0:23,0:23:69.18:0,69,1095	0/0:21,0:21:60.21:0,60,1054	0/0:14,0:14:39.13:0,39,686	0/0:23,0:23:69.23:0,69,1191	0/0:24,0:24:72.25:0,72,1277	0/0:22,0:22:60.18:0,60,1033	0/0:19,0:19:54.08:0,54,840	1/1:0,18:18:54.16:724,54,0	1/1:3,11:14:30.10:412,30,0	1/1:1,44:43:99:1421,105,0	0/0:9,0:9:27.09:0,27,475	0/0:18,0:18:42.14:0,42,735	0/0:21,0:21:60.21:0,60,1043	0/0:21,0:21:57.19:0,57,990	0/0:24,0:24:66.23:0,66,1162	1/1:2,17:18:45.15:618,45,0	0/0:19,0:19:51.17:0,51,869
chr10	106959320	.	C	CT	1939.35	PASS	AB=0.889;AC=11;AF=0.196;AN=56;BaseQRankSum=-7.321;DP=629;FS=3.466;HRun=8;HaplotypeScore=70.8316;InbreedingCoeff=0.8634;MQ=87.18;MQ0=5;MQRankSum=-0.899;QD=18.30;ReadPosRankSum=-2.550;VQSLOD=3.1131;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:95.94:0,96,851	0/0:8,0:8:21:0,21,189	0/0:61,0:39:9.31:0,9,395	0/0:61,0:39:39.43:0,39,326	0/0:20,0:20:53.97:0,54,474	0/0:18,0:18:41.97:0,42,369	0/0:15,0:15:20.44:0,20,248	1/1:6,26:33:74.96:703,75,0	0/0:22,0:22:54.01:0,54,490	0/0:20,0:20:53.90:0,54,468	0/0:10,0:10:20.93:0,21,182	0/0:18,0:18:47.89:0,48,413	0/0:22,0:22:54.01:0,54,489	0/0:17,1:18:19.40:0,19,424	0/0:35,0:35:90.03:0,90,823	0/0:29,0:28:77.93:0,78,691	0/0:33,0:33:92.93:0,93,824	0/0:20,0:20:48.02:0,48,439	1/1:4,10:14:30.09:343,30,0	1/1:2,10:12:11.41:322,11,0	1/1:1,12:13:27.08:311,27,0	0/0:13,0:13:36.02:0,36,329	0/0:11,0:11:30.01:0,30,274	0/1:14,2:16:21.24:21,0,322	0/0:20,0:20:53.96:0,54,484	0/0:26,0:26:69.02:0,69,628	1/1:4,14:18:36.11:415,36,0	0/0:7,0:7:20.98:0,21,185
chr10	106959565	.	TGA	T	1046.76	PASS	AB=0.763;AC=10;AF=0.179;AN=56;BaseQRankSum=0.966;DP=422;FS=32.212;HRun=0;HaplotypeScore=58.5477;InbreedingCoeff=0.6532;MQ=62.39;MQ0=18;MQRankSum=-3.219;QD=22.76;ReadPosRankSum=-3.176;VQSLOD=1.3791;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:42.12:0,42,605	0/0:6,0:6:18:0,18,216	0/0:38,0:8:22.87:0,23,245	0/0:55,0:15:17.80:0,18,304	0/0:17,0:17:37.27:0,37,481	0/0:9,0:9:22.55:0,23,194	0/0:11,0:11:14.55:0,15,296	1/1:18,1:17:42.67:623,43,0	0/0:5,0:5:15.05:0,15,211	0/0:17,0:16:48.10:0,48,664	0/0:16,0:15:14.75:0,15,338	0/0:8,1:9:13.90:0,14,217	0/1:6,0:6:27.89:28,0,150	0/0:13,0:13:27.07:0,27,372	0/0:17,0:17:45.57:0,46,599	0/0:15,0:15:36.59:0,37,484	0/0:24,0:24:35.92:0,36,766	0/0:21,0:20:34.40:0,34,477	0/1:1,9:10:16.81:295,0,17	1/1:1,3:4:7.38:80,7,0	1/1:4,0:4:11.97:154,12,0	0/0:12,0:11:27.75:0,28,357	0/0:14,0:13:36.59:0,37,514	0/0:13,0:12:14.17:0,14,239	0/0:8,0:8:15.25:0,15,191	0/0:19,0:18:48.24:0,48,632	1/1:0,2:3:2.85:20,3,0	0/0:16,0:14:34.02:0,34,471
chr10	106960031	.	A	AAG	1690.11	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=-2.855;DP=371;FS=7.730;HRun=0;HaplotypeScore=62.3525;InbreedingCoeff=0.7913;MQ=61.44;MQ0=5;MQRankSum=0.249;QD=15.09;ReadPosRankSum=2.425;VQSLOD=2.8411;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:32.34:0,32,321	0/0:5,0:5:9.92:0,10,86	0/0:28,0:10:2.26:0,2,92	0/1:16,0:5:4.44:4,0,9	0/0:16,0:16:35.95:0,36,365	0/0:17,0:16:47.74:0,48,449	0/0:8,0:7:17.97:0,18,174	1/1:10,12:23:40.41:518,40,0	0/0:6,0:6:17.93:0,18,169	0/0:7,0:7:21:0,21,219	0/0:10,0:10:23.84:0,24,218	0/1:12,0:12:1.87:2,0,105	0/0:10,0:9:23.93:0,24,220	0/0:9,0:9:24.02:0,24,242	0/0:5,0:5:14.85:0,15,125	0/0:13,0:12:36.01:0,36,376	0/0:24,0:24:62.12:0,62,526	0/0:12,0:12:31.55:0,32,321	1/1:11,4:17:43.99:421,44,0	1/1:0,8:9:20.94:263,21,0	1/1:2,11:15:33.09:477,33,0	0/0:12,0:12:30.07:0,30,342	0/0:13,0:13:33.79:0,34,318	0/0:16,0:16:35.44:0,35,323	0/0:14,0:14:41.99:0,42,424	0/0:12,0:12:34.82:0,35,335	1/1:3,12:17:9.37:176,9,0	0/0:7,0:7:21.03:0,21,239
chr10	106962306	.	ATC	A	5832.01	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=15.342;DP=864;FS=0.688;HRun=0;HaplotypeScore=106.2222;InbreedingCoeff=0.9981;MQ=84.94;MQ0=0;MQRankSum=-0.943;QD=35.35;ReadPosRankSum=-0.290;VQSLOD=6.7366;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,178,2973	0/0:20,0:20:60.19:0,60,1026	0/0:22,0:22:60.17:0,60,991	0/0:32,0:32:85.81:0,86,1394	0/0:31,0:31:93.32:0,93,1643	0/0:25,0:25:69.20:0,69,1141	0/0:37,0:37:99:0,105,1812	1/1:4,34:38:99:1398,102,0	0/0:27,0:27:78.25:0,78,1326	0/0:38,0:38:99:0,105,1801	0/0:17,0:17:51.14:0,51,833	0/0:43,0:43:99:0,123,2086	0/0:31,0:31:93.32:0,93,1629	0/0:28,0:28:81.28:0,81,1430	0/0:32,0:32:90.31:0,90,1576	0/0:36,0:36:99:0,105,1774	0/0:46,0:46:99:0,129,2203	0/0:33,0:33:99:0,99,1736	1/1:1,21:22:63.20:848,63,0	1/1:2,20:22:57.19:783,57,0	1/1:2,43:45:99:1566,114,0	0/0:27,0:27:78.27:0,78,1378	0/0:29,0:29:84.29:0,84,1473	0/0:19,0:19:51.16:0,51,872	0/0:17,0:17:48.15:0,48,820	0/0:42,0:42:99:0,123,2135	1/1:1,37:38:90.30:1237,90,0	0/0:8,0:8:18.06:0,18,318
chr10	106965956	.	TCTGTGCCCGCTCCCATGTTGGAA	T	6156.88	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.130;DP=641;FS=2.670;HRun=0;HaplotypeScore=360.7593;InbreedingCoeff=0.9667;MQ=90.31;MQ0=0;MQRankSum=-8.647;QD=75.08;ReadPosRankSum=1.194;VQSLOD=3.6674;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,166,14565	0/0:7,0:7:12.51:0,13,1001	0/0:35,0:35:84.29:0,84,4677	0/0:23,0:23:45.15:0,45,2360	0/0:20,0:20:54.19:0,54,5297	0/0:17,0:17:45.11:0,45,4018	0/0:29,0:29:84.27:0,84,6956	1/1:22,0:22:42.11:893,42,0	0/0:26,0:26:72.21:0,72,5794	0/0:24,0:24:60.12:0,60,4719	0/0:13,0:13:36.11:0,36,2716	0/0:26,0:26:75.26:0,75,7106	0/0:23,0:23:66.21:0,66,5631	0/0:18,0:18:39.12:0,39,3545	0/0:26,0:26:75.26:0,75,7479	0/0:25,0:25:66.23:0,66,6102	0/0:35,0:35:93.32:0,93,8183	0/0:24,0:24:66.18:0,66,5622	1/1:1,12:13:39.12:1946,39,0	1/1:1,14:15:36.12:1978,36,0	1/1:2,14:16:6.02:223,6,0	0/0:19,0:19:51.18:0,51,4773	0/0:18,0:18:48.16:0,48,4210	0/0:28,0:28:75.26:0,75,6857	0/0:17,0:17:39.13:0,39,3012	0/0:34,0:34:84.29:0,84,7924	1/1:3,13:16:18.06:1117,18,0	0/0:12,0:12:33.11:0,33,3117
chr10	106965966	.	CT	C	644.14	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.797;DP=624;FS=3.641;HRun=1;HaplotypeScore=88.9485;InbreedingCoeff=0.9647;MQ=89.28;MQ0=0;MQRankSum=-8.773;QD=9.34;ReadPosRankSum=1.642;VQSLOD=1.5141;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,174,2612	0/0:9,0:9:27.09:0,27,430	0/0:33,0:33:93.28:0,93,1437	0/0:23,0:23:60.12:0,60,853	0/0:22,0:22:66.21:0,66,1028	0/0:15,0:15:45.15:0,45,719	0/0:31,0:31:93.25:0,93,1367	1/1:5,9:14:39.01:455,39,0	0/0:25,0:25:75.26:0,75,1199	0/0:20,0:20:60.20:0,60,939	0/0:13,0:13:39.13:0,39,621	0/0:26,0:26:78.27:0,78,1239	0/0:21,0:21:63.20:0,63,984	0/0:15,0:15:45.15:0,45,719	0/0:29,0:29:87.30:0,87,1388	0/0:28,0:28:84.27:0,84,1317	0/0:36,0:36:99:0,105,1627	0/0:24,0:24:66.21:0,66,1031	1/1:13,0:13:28.94:165,29,0	1/1:14,0:14:25.91:124,26,0	1/1:14,0:14:5.16:25,5,0	0/0:21,0:21:63.20:0,63,983	0/0:19,0:19:57.18:0,57,879	0/0:28,0:28:84.22:0,84,1264	0/0:15,0:15:42.14:0,42,669	0/0:30,0:30:90.31:0,90,1438	1/1:14,0:14:13.32:42,13,0	0/0:14,0:14:39.13:0,39,620
chr10	106967991	.	TGGTA	T	3931.93	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=11.799;DP=647;FS=0.487;HRun=0;HaplotypeScore=88.7069;InbreedingCoeff=0.9232;MQ=48.83;MQ0=39;MQRankSum=-7.931;QD=33.90;ReadPosRankSum=-1.177;VQSLOD=3.4787;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,102,2635	1/1:1,6:7:15.05:269,15,0	0/0:27,0:2:5.95:0,6,75	./.	0/0:7,0:7:12.04:0,12,311	0/0:24,0:24:42.14:0,42,1074	0/0:36,0:35:57.16:0,57,1344	1/1:7,25:31:72.19:1197,72,0	0/0:24,0:24:57.18:0,57,1425	0/0:20,0:17:45.15:0,45,1162	0/0:10,0:8:9.03:0,9,226	0/0:36,0:36:68.90:0,69,1679	0/0:38,0:38:66.19:0,66,1651	0/0:26,0:26:63.22:0,63,1621	0/0:35,0:35:96.29:0,96,2400	0/0:25,0:25:57.20:0,57,1418	0/0:30,0:29:78.27:0,78,1999	0/0:19,0:19:42.14:0,42,1076	1/1:7,6:13:15.05:270,15,0	1/1:0,7:5:12.04:216,12,0	1/1:5,31:30:69.19:1206,69,0	0/0:17,0:15:20.84:0,21,538	0/0:10,0:8:9.03:0,9,233	0/0:28,0:27:72.25:0,72,1836	0/0:12,0:9:18.06:0,18,413	0/0:26,0:25:60.21:0,60,1550	1/1:2,19:20:45.11:774,45,0	0/0:4,0:3:9.03:0,9,234
chr10	106968239	.	T	TTGTTGG	10695.87	PASS	AB=0.923;AC=47;AF=0.870;AN=54;BaseQRankSum=-3.456;DP=281;FS=43.452;HRun=0;HaplotypeScore=194.4266;InbreedingCoeff=-0.0612;MQ=65.45;MQ0=11;MQRankSum=-0.142;QD=38.06;ReadPosRankSum=-0.588;VQSLOD=3.0105;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:9.03:146,9,0	1/1:4,0:4:8.01:114,8,0	1/1:11,2:8:15.52:384,16,0	0/1:37,3:13:99:381,0,192	0/1:4,0:4:0:0,0,0	1/1:8,0:5:3.01:38,3,0	1/1:16,0:16:45.15:1191,45,0	./.	1/1:17,0:15:12.13:635,12,0	0/1:6,0:6:24.03:257,0,24	1/1:5,0:4:9.03:142,9,0	1/1:12,0:12:22.60:515,23,0	1/1:17,0:16:37.09:833,37,0	1/1:13,0:13:13.59:689,14,0	1/1:14,0:13:36.12:984,36,0	1/1:16,0:14:22.20:1012,22,0	1/1:9,0:9:24.08:739,24,0	1/1:9,0:9:21.07:706,21,0	1/1:2,0:2:6.02:93,6,0	0/1:7,0:10:2.74:118,0,3	1/1:3,0:3:9.03:189,9,0	1/1:8,0:8:12.04:290,12,0	1/1:5,0:5:3.48:73,3,0	1/1:11,0:11:13.81:256,14,0	0/1:5,0:4:1.32:33,0,1	0/1:4,0:5:2.27:324,0,2	0/1:9,0:9:11.36:386,0,11	1/1:4,0:4:6.02:170,6,0
chr10	106968816	.	CTT	C	964.26	PASS	AB=0.804;AC=12;AF=0.214;AN=56;BaseQRankSum=2.109;DP=506;FS=12.124;HRun=15;HaplotypeScore=86.3939;InbreedingCoeff=0.5203;MQ=74.22;MQ0=2;MQRankSum=2.304;QD=6.43;ReadPosRankSum=4.352;VQSLOD=-0.6833;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:18:40.53:0,41,431	0/1:5,2:14:34.10:34,0,52	0/1:24,1:22:2.15:2,0,185	0/1:11,0:10:21.76:22,0,66	0/0:23,0:24:48:0,48,518	0/0:16,0:17:47.54:0,48,529	0/0:15,0:16:38.49:0,38,437	1/1:12,22:35:43.29:508,43,0	0/0:19,0:23:56.90:0,57,613	0/0:22,0:23:29.43:0,29,292	0/0:16,0:16:33.03:0,33,380	0/0:20,0:20:60.07:0,60,713	0/0:11,0:11:27.02:0,27,318	0/0:18,0:18:44.88:0,45,454	0/0:17,0:18:44.59:0,45,541	0/0:9,0:11:29.99:0,30,336	0/0:12,0:14:41.56:0,42,457	0/0:16,0:17:47.31:0,47,582	1/1:12,3:16:14.43:112,14,0	1/1:9,16:26:5.67:258,6,0	1/1:1,1:3:2.01:25,2,0	0/0:18,0:18:42.08:0,42,514	0/0:18,0:19:38.55:0,39,455	0/0:10,0:10:21.05:0,21,263	0/0:16,0:16:34.24:0,34,388	0/0:36,0:36:65.95:0,66,740	0/1:9,10:20:17.03:161,0,17	0/0:10,0:11:32.58:0,33,394
chr10	106972078	.	GGTAGTCAAGTTT	G	7293.07	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.281;DP=622;FS=4.820;HRun=0;HaplotypeScore=214.8711;InbreedingCoeff=0.9896;MQ=92.58;MQ0=0;MQRankSum=-10.108;QD=73.67;ReadPosRankSum=-2.552;VQSLOD=3.8298;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,7746	0/0:7,0:7:21.06:0,21,1114	0/0:31,0:31:89.12:0,89,4891	0/0:23,0:23:69.24:0,69,3644	0/0:13,0:13:39.13:0,39,2373	0/0:17,0:17:51.16:0,51,3032	0/0:25,0:25:75.26:0,75,4555	1/1:0,30:31:90.08:2354,90,0	0/0:27,0:27:81.28:0,81,4958	0/0:16,0:16:48.16:0,48,2777	0/0:9,0:9:27.09:0,27,1600	0/0:30,0:30:90.27:0,90,5129	0/0:23,0:23:69.24:0,69,3950	0/0:31,0:31:90.31:0,90,5404	0/0:28,0:28:84.29:0,84,4642	0/0:24,0:24:72.25:0,72,4284	0/0:42,0:42:99:0,126,7098	0/0:24,0:24:72.23:0,72,4120	1/1:0,24:24:72.15:2308,72,0	1/1:0,5:5:12.04:474,12,0	1/1:0,26:26:20.80:747,21,0	0/0:18,0:18:51.16:0,51,2974	0/0:12,0:12:36.12:0,36,2232	0/0:35,0:35:99:0,99,5912	0/0:12,0:12:36.12:0,36,2287	0/0:25,0:25:75.26:0,75,4564	1/1:0,13:13:36.12:1411,36,0	0/0:7,0:7:21.07:0,21,1189
chr10	106973162	.	C	CT	1534.48	PASS	AB=0.789;AC=12;AF=0.214;AN=56;BaseQRankSum=-7.834;DP=561;FS=21.280;HRun=11;HaplotypeScore=64.7724;InbreedingCoeff=0.7485;MQ=68.23;MQ0=0;MQRankSum=0.486;QD=11.12;ReadPosRankSum=-2.073;VQSLOD=0.7638;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:48:99:0,112,861	1/1:4,4:8:9.02:91,9,0	0/0:12,0:11:14.90:0,15,113	0/0:14,0:13:14.33:0,14,99	0/0:21,1:22:11.33:0,11,271	0/0:20,1:22:22.42:0,22,347	0/0:13,0:13:23.87:0,24,183	1/1:8,18:26:48.10:487,48,0	0/0:10,0:10:23.88:0,24,186	0/0:21,0:21:47.77:0,48,369	0/1:13,0:13:0.46:0,0,179	0/0:24,0:24:53.74:0,54,418	0/0:19,1:20:17.33:0,17,316	0/0:20,0:22:33.84:0,34,244	0/0:12,0:13:31.90:0,32,238	0/0:19,0:19:44.76:0,45,346	0/0:27,1:28:29.29:0,29,411	0/0:26,1:27:38.75:0,39,481	1/1:10,9:19:30:286,30,0	0/1:6,16:22:47.82:290,0,48	1/1:10,15:26:12:336,12,0	0/0:16,0:16:41.82:0,42,323	0/0:11,0:12:28.88:0,29,215	0/0:28,1:29:47.24:0,47,546	0/0:16,0:16:32.79:0,33,253	0/0:27,0:27:56.74:0,57,441	1/1:6,15:24:2.64:207,3,0	0/0:6,0:6:14.93:0,15,116
chr10	106974498	.	GCA	G	85.66	PASS	AB=0.962;AC=7;AF=0.125;AN=56;BaseQRankSum=4.204;DP=895;FS=6.337;HRun=0;HaplotypeScore=142.2435;InbreedingCoeff=0.1883;MQ=58.73;MQ0=7;MQRankSum=1.874;QD=0.53;ReadPosRankSum=0.826;VQSLOD=2.2759;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:63:99:0,105,2011	1/1:15,0:15:15.15:58,15,0	0/1:27,1:14:9.75:10,0,243	0/0:36,0:17:29.26:0,29,300	0/0:16,0:16:36.12:0,36,551	0/0:24,0:24:54.10:0,54,754	0/0:34,0:34:46.33:0,46,1069	0/0:30,1:31:15.54:0,16,765	0/0:45,1:46:74.49:0,74,1625	0/0:34,1:35:44.57:0,45,1119	0/0:14,0:14:27.04:0,27,385	0/0:38,3:41:13.93:0,14,1125	0/0:38,3:40:62.67:0,63,1411	0/0:37,0:37:99:0,105,1537	0/1:26,2:28:46.23:46,0,747	0/0:20,1:21:8.52:0,9,639	0/1:38,3:42:35.44:35,0,1301	0/0:36,1:37:47.61:0,48,1245	0/0:27,0:26:48.88:0,49,496	0/1:16,0:16:1.32:1,0,275	0/0:55,0:55:42.45:0,42,485	0/0:22,0:22:48.16:0,48,765	0/0:24,0:24:21.04:0,21,784	0/0:65,2:67:95.28:0,95,2483	0/0:28,0:28:78.15:0,78,1172	0/1:33,0:33:62.05:62,0,932	0/0:18,0:18:33.40:0,33,349	0/0:14,1:15:8.52:0,9,630
chr10	106974513	.	C	CACAT	3774.14	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=0.566;DP=970;FS=10.780;HRun=0;HaplotypeScore=182.2611;InbreedingCoeff=0.8858;MQ=52.69;MQ0=36;MQRankSum=-6.737;QD=21.82;ReadPosRankSum=-2.120;VQSLOD=2.4347;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:56:99:0,129,1926	0/1:5,0:14:15.34:241,0,15	0/0:59,0:15:32.87:0,33,298	0/0:62,0:18:41.95:0,42,401	0/0:13,0:13:33.09:0,33,555	0/0:27,0:27:54.49:0,54,659	0/0:34,0:34:90.62:0,91,1288	1/1:38,3:40:83.57:859,84,0	0/0:51,0:51:99:0,125,1849	0/0:32,0:31:81.16:0,81,1208	0/0:14,0:14:36.05:0,36,514	0/0:42,0:42:99:0,106,1615	0/0:40,0:38:99:0,102,1639	0/0:41,0:41:99:0,105,1640	0/0:30,0:30:83.65:0,84,1058	0/0:18,0:18:54.11:0,54,798	0/0:49,0:49:99:0,125,1759	0/0:33,0:33:93.06:0,93,1464	1/1:10,13:24:40.96:819,41,0	1/1:15,2:17:21:370,21,0	1/1:40,19:59:32.78:861,33,0	0/0:27,0:26:55.73:0,56,762	0/0:19,0:19:51.15:0,51,850	0/0:69,0:69:99:0,189,2935	0/0:27,0:27:75.24:0,75,1285	0/0:36,0:36:95.43:0,95,1300	1/1:9,4:14:15.48:624,15,0	0/0:16,0:16:48.15:0,48,810
chr10	106974517	.	TACACACAC	T	882.34	PASS	AB=0.918;AC=8;AF=0.143;AN=56;BaseQRankSum=9.155;DP=976;FS=10.506;HRun=0;HaplotypeScore=254.1757;InbreedingCoeff=0.4137;MQ=53.40;MQ0=36;MQRankSum=-3.162;QD=5.28;ReadPosRankSum=-1.869;VQSLOD=0.9601;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,132,4492	1/1:14,0:14:21.99:199,22,0	0/0:65,0:15:39.03:0,39,822	0/0:65,0:21:54.14:0,54,997	0/0:13,0:13:36.12:0,36,1420	0/0:26,0:26:56.50:0,57,1704	0/0:33,0:33:96.30:0,96,3132	0/1:39,0:38:28.36:28,0,544	0/0:50,0:50:99:0,140,4534	0/0:30,0:29:84.27:0,84,2904	0/0:15,0:15:42.14:0,42,1425	0/0:41,0:41:99:0,117,4138	0/0:40,0:38:99:0,102,4025	0/0:41,0:41:99:0,117,4080	0/0:31,0:31:87.25:0,87,2489	0/0:21,0:21:63.18:0,63,1931	0/0:50,0:50:99:0,145,4446	0/0:33,0:33:89.96:0,90,3531	0/1:22,2:20:99:199,0,211	1/1:14,2:16:20.77:201,21,0	0/1:59,0:58:76.43:177,0,76	0/0:26,0:25:57.44:0,57,1752	0/0:18,0:18:51.17:0,51,1935	0/0:70,0:70:99:0,199,7063	0/0:30,0:30:84.26:0,84,3112	0/0:37,0:37:99:0,99,3323	0/1:10,5:15:51.21:225,0,51	0/0:19,0:19:57.20:0,57,2104
chr10	106974531	.	CA	C	763.74	PASS	AB=0.782;AC=7;AF=0.125;AN=56;BaseQRankSum=10.680;DP=1015;FS=5.883;HRun=2;HaplotypeScore=146.6835;InbreedingCoeff=0.1980;MQ=50.97;MQ0=43;MQRankSum=-9.385;QD=4.74;ReadPosRankSum=-1.757;VQSLOD=-0.1721;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,1802	1/1:0,14:14:30.09:376,30,0	0/0:87,0:15:39.06:0,39,514	0/0:73,0:20:57.18:0,57,825	0/0:20,0:20:60.19:0,60,877	0/0:19,0:19:48.57:0,49,672	0/0:36,0:37:76.87:0,77,1532	0/1:31,9:37:99:239,0,644	0/0:51,0:51:99:0,150,2171	0/0:29,0:28:78.26:0,78,1158	0/0:17,0:17:48.16:0,48,719	0/0:44,0:44:99:0,111,1818	0/0:38,0:36:99:0,99,1446	0/0:42,0:42:99:0,120,1732	0/0:28,0:28:68.83:0,69,1027	0/0:22,0:22:66.22:0,66,978	0/0:53,1:54:99:0,155,2321	0/0:36,0:36:99:0,105,1542	0/1:18,6:19:99:132,0,456	0/1:7,7:14:12.87:13,0,16	0/1:50,6:55:9.99:10,0,85	0/0:23,0:22:48.12:0,48,689	0/0:18,0:18:51.17:0,51,749	0/0:75,1:76:99:0,214,3168	0/0:32,0:32:93.22:0,93,1334	0/0:43,0:42:99:0,120,1768	0/1:8,5:13:99:129,0,179	0/0:21,0:21:63.21:0,63,933
chr10	106974532	.	A	AT	323.77	PASS	AB=0.951;AC=8;AF=0.143;AN=56;BaseQRankSum=10.542;DP=1021;FS=0.000;HRun=0;HaplotypeScore=154.0235;InbreedingCoeff=0.3915;MQ=50.79;MQ0=43;MQRankSum=-7.709;QD=2.01;ReadPosRankSum=-4.872;VQSLOD=0.8707;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:45:99:0,122,1713	1/1:14,0:14:16.11:106,16,0	0/0:87,1:15:39.11:0,39,500	0/0:74,0:20:57.14:0,57,773	0/0:20,0:20:60.19:0,60,821	0/0:18,0:19:48.56:0,49,630	0/0:37,0:38:82.96:0,83,1445	0/1:38,0:35:75.16:75,0,614	0/0:52,0:52:99:0,150,2059	0/0:30,0:29:78.26:0,78,1090	0/0:17,0:17:48.16:0,48,671	0/0:44,0:44:99:0,125,1725	0/0:39,0:37:99:0,99,1358	0/0:42,0:42:99:0,120,1625	0/0:27,0:27:72:0,72,975	0/0:22,0:22:66.22:0,66,921	0/0:54,0:54:99:0,156,2180	0/0:36,0:36:99:0,105,1463	0/1:24,0:19:23.69:24,0,417	1/1:13,1:14:9.62:53,10,0	0/1:51,7:57:30.98:139,0,31	0/0:23,0:22:48.12:0,48,649	0/0:17,0:17:51.17:0,51,713	0/0:76,0:76:99:0,214,2975	0/0:31,0:32:93.22:0,93,1257	0/0:43,0:42:99:0,120,1674	0/1:11,1:12:69.63:70,0,130	0/0:21,0:21:63.21:0,63,879
chr10	106974540	.	CAT	C	181	PASS	AB=0.960;AC=7;AF=0.125;AN=56;BaseQRankSum=9.450;DP=1030;FS=1.278;HRun=0;HaplotypeScore=166.6689;InbreedingCoeff=0.1220;MQ=50.82;MQ0=40;MQRankSum=-5.613;QD=1.12;ReadPosRankSum=-3.180;VQSLOD=2.1772;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,110,1906	1/1:15,0:15:2.47:73,2,0	0/0:89,1:22:57.04:0,57,847	0/0:81,0:23:69.05:0,69,1118	0/0:21,0:21:63.20:0,63,1179	0/0:22,0:23:60.15:0,60,1033	0/0:36,0:37:99:0,108,1959	0/1:36,1:34:63.91:64,0,426	0/0:55,0:55:99:0,156,2694	0/0:34,0:33:84.21:0,84,1446	0/0:20,0:20:54.14:0,54,941	0/0:44,0:44:99:0,120,2188	0/0:39,0:37:99:0,105,1775	0/0:41,0:41:96.44:0,96,2197	0/0:25,0:25:67.43:0,67,1253	0/0:22,0:22:66.16:0,66,1123	0/0:56,0:56:99:0,157,2816	0/0:39,0:39:99:0,105,2011	0/1:24,0:20:42.29:42,0,270	0/1:14,0:14:0.63:1,0,13	0/1:49,7:54:17.52:69,0,18	0/0:22,0:22:48.15:0,48,881	0/0:14,0:14:42.12:0,42,746	0/0:76,0:76:99:0,217,3930	0/0:30,0:30:84.23:0,84,1579	0/0:40,0:39:99:0,114,2110	0/1:14,1:15:51.92:52,0,111	0/0:19,0:19:57.16:0,57,1010
chr10	106974545	.	ATAC	A	2547.12	PASS	AB=0.703;AC=10;AF=0.179;AN=56;BaseQRankSum=11.585;DP=1011;FS=6.445;HRun=0;HaplotypeScore=172.0888;InbreedingCoeff=0.7527;MQ=52.80;MQ0=29;MQRankSum=-7.680;QD=16.98;ReadPosRankSum=-5.922;VQSLOD=1.7363;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,111,2362	1/1:2,0:17:29.97:489,30,0	0/0:81,0:23:60.20:0,60,1202	0/0:77,0:28:84.25:0,84,1700	0/0:22,0:22:66.23:0,66,1525	0/0:24,0:24:62.46:0,62,1439	0/0:41,0:41:99:0,123,2652	0/1:21,14:32:99:760,0,204	0/0:51,0:52:99:0,134,3470	0/0:35,0:35:95.81:0,96,2023	0/0:19,0:19:57.20:0,57,1343	0/0:44,0:44:99:0,117,2705	0/0:37,0:37:99:0,105,2226	0/0:42,0:42:99:0,123,2790	0/0:25,0:25:72.25:0,72,1665	0/0:22,0:22:66.23:0,66,1565	0/0:53,0:53:99:0,153,3568	0/0:41,0:41:99:0,123,2719	0/1:10,8:14:91.43:395,0,91	1/1:3,12:15:16.86:172,17,0	1/1:39,7:52:40.37:478,40,0	0/0:22,0:22:48.64:0,49,1129	0/0:13,0:13:39.13:0,39,896	0/0:72,0:72:99:0,211,4768	0/0:32,0:32:90.30:0,90,2088	0/0:41,0:42:99:0,120,2688	1/1:6,5:12:22.38:421,22,0	0/0:16,0:16:48.15:0,48,1131
chr10	106974556	.	CAT	C	328.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.995;DP=988;FS=11.237;HRun=0;HaplotypeScore=156.9561;InbreedingCoeff=0.9864;MQ=55.66;MQ0=25;MQRankSum=-3.512;QD=18.27;ReadPosRankSum=-2.736;VQSLOD=2.4314;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:78.75:0,79,1761	1/1:7,11:18:50.53:424,51,0	0/0:77,1:25:52.50:0,52,882	0/0:74,2:33:89.78:0,90,1304	0/0:22,0:22:60.17:0,60,1086	0/0:22,0:22:59.42:0,59,1102	0/0:41,0:41:99:0,123,2190	0/0:25,0:25:16.39:0,16,261	0/0:54,0:54:99:0,150,2612	0/0:38,0:38:99:0,105,1759	0/0:20,0:20:60.18:0,60,1090	0/0:46,0:46:99:0,120,1983	0/0:34,0:34:84.51:0,85,1551	0/0:41,0:41:99:0,105,1959	0/0:27,0:27:81.22:0,81,1437	0/0:27,0:27:78.13:0,78,1298	0/0:49,0:49:99:0,144,2484	0/0:39,0:39:94.45:0,94,1749	0/0:16,0:15:27.99:0,28,178	0/0:15,0:15:27.13:0,27,182	0/0:57,0:56:90.91:0,91,552	0/0:19,0:19:53.72:0,54,850	0/0:13,0:13:36.11:0,36,650	0/0:62,0:62:99:0,184,3367	0/0:31,0:31:90.26:0,90,1657	0/0:41,0:40:99:0,117,2059	0/0:15,0:15:34.27:0,34,185	0/0:20,0:20:60.06:0,60,1001
chr10	106975317	.	TGGTA	T	3183.91	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.944;DP=751;FS=5.744;HRun=0;HaplotypeScore=103.7107;InbreedingCoeff=0.9314;MQ=51.56;MQ0=38;MQRankSum=-5.791;QD=23.24;ReadPosRankSum=-1.870;VQSLOD=2.7413;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:57:99:0,99,2484	1/1:0,2:2:6.02:108,6,0	0/0:24,0:3:9.03:0,9,186	0/0:32,0:1:3.01:0,3,71	0/0:15,0:15:33.11:0,33,836	0/0:25,0:25:63.22:0,63,1631	0/0:30,0:30:57.18:0,57,1386	1/1:7,12:19:36.08:613,36,0	0/0:25,0:25:57.18:0,57,1417	0/0:24,0:21:57.19:0,57,1400	0/0:11,0:11:27.09:0,27,684	0/0:38,0:37:90.04:0,90,2270	0/0:33,0:32:57.20:0,57,1473	0/0:31,0:30:78.25:0,78,1971	0/0:27,0:26:69.24:0,69,1749	0/0:31,0:31:72.25:0,72,1861	0/0:33,0:33:60.21:0,60,1551	0/0:27,0:27:63.22:0,63,1624	1/1:1,11:8:21.07:377,21,0	1/1:5,17:19:42.10:720,42,0	1/1:12,51:37:60.20:1057,60,0	0/0:23,0:22:54.19:0,54,1373	0/0:30,0:26:63.22:0,63,1594	0/0:44,0:43:96.33:0,96,2456	0/0:15,0:15:39.13:0,39,970	0/0:23,0:21:63.22:0,63,1631	1/1:5,14:18:30.06:491,30,0	0/0:14,0:14:33.11:0,33,856
chr10	106975534	.	TTC	T	302.56	PASS	AB=0.970;AC=16;AF=0.333;AN=48;BaseQRankSum=2.352;DP=664;FS=7.646;HRun=0;HaplotypeScore=109.9228;InbreedingCoeff=-0.0920;MQ=35.18;MQ0=116;MQRankSum=0.010;QD=0.90;ReadPosRankSum=2.429;VQSLOD=1.1985;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:54,0:37:48.27:97,0,48	./.	./.	./.	1/1:17,0:18:2.62:17,3,0	0/1:23,0:19:8.56:9,0,61	0/1:37,1:31:20.04:20,0,146	./.	0/1:16,0:18:26.95:42,0,27	0/1:14,0:11:0.24:15,0,0	0/0:16,0:13:0:0,0,0	0/0:24,0:17:9.65:0,10,61	0/0:29,0:21:6.82:0,7,43	0/1:20,0:16:14.08:14,0,35	0/1:16,0:14:21.62:22,0,23	0/0:28,0:24:3.50:0,3,133	0/1:21,8:24:13.65:14,0,151	1/1:13,0:14:11.62:69,12,0	0/0:29,0:14:2.97:0,3,20	0/0:19,0:16:0:0,0,1	0/0:21,0:11:3:0,3,26	1/1:14,0:14:5.34:24,5,0	0/0:10,0:9:5.92:0,6,42	0/1:36,1:30:24.95:25,0,119	0/0:16,0:16:0:0,0,0	0/1:34,1:28:41.19:64,0,41	0/0:15,0:9:0:0,0,0	0/0:15,0:12:5.76:0,6,26
chr10	106975589	.	TCACACACA	T	507.66	PASS	AB=0.912;AC=8;AF=0.148;AN=54;BaseQRankSum=3.296;DP=480;FS=4.491;HRun=0;HaplotypeScore=124.3973;InbreedingCoeff=0.5587;MQ=48.10;MQ0=27;MQRankSum=-5.499;QD=9.95;ReadPosRankSum=-3.626;VQSLOD=1.3202;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:35:73:0,73,2208	1/1:2,1:2:3.01:58,3,0	0/0:14,0:9:27.09:0,27,798	0/0:18,0:5:12.03:0,12,396	0/0:12,0:12:8.68:0,9,386	0/0:16,0:14:32.73:0,33,995	0/0:32,0:29:63.20:0,63,2436	0/1:15,2:7:65.72:66,0,248	0/0:17,0:17:27.05:0,27,907	0/0:15,0:15:38.88:0,39,1177	0/0:8,0:6:9.03:0,9,387	0/0:19,0:17:41.94:0,42,1331	0/0:10,0:8:9.79:0,10,260	0/0:24,0:22:35.36:0,35,1352	0/0:15,0:15:30.56:0,31,1048	0/0:18,0:18:33.11:0,33,1237	0/0:35,0:32:66.17:0,66,2268	0/0:24,0:23:52.94:0,53,1775	./.	1/1:7,4:10:12.04:267,12,0	0/1:12,1:11:80.40:80,0,107	0/0:9,0:9:13.67:0,14,508	0/0:8,0:8:17.96:0,18,743	0/0:34,0:32:57.13:0,57,1976	0/0:9,0:7:15.62:0,16,629	0/0:32,0:27:76.42:0,76,2419	1/1:2,5:5:9.03:172,9,0	0/0:5,0:5:15.05:0,15,639
chr10	106978574	.	ACG	A	1118.40	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.996;DP=460;FS=13.099;HRun=0;HaplotypeScore=84.3394;InbreedingCoeff=0.8919;MQ=68.90;MQ0=7;MQRankSum=1.373;QD=12.03;ReadPosRankSum=-1.056;VQSLOD=2.2787;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:24.21:0,24,161	0/0:3,0:3:8.89:0,9,59	0/0:27,0:21:52.78:0,53,463	0/0:22,0:19:23.47:0,23,305	0/0:6,0:6:14.67:0,15,93	0/0:17,0:17:44.06:0,44,316	0/0:19,0:19:44.53:0,45,334	1/1:3,15:16:44.87:362,45,0	0/0:20,0:20:47.55:0,48,424	0/0:16,0:14:31.48:0,31,229	0/0:5,0:4:5.95:0,6,42	0/0:21,0:21:47.69:0,48,301	0/0:15,0:15:38.51:0,39,276	0/0:19,0:19:37.37:0,37,245	0/0:14,0:13:25.81:0,26,252	0/0:25,0:25:48.87:0,49,494	0/0:24,0:24:58.06:0,58,514	0/0:24,0:24:69.12:0,69,600	1/1:3,7:9:20.84:159,21,0	1/1:0,5:5:3.01:48,3,0	1/1:48,0:46:67.50:524,68,0	0/0:11,0:11:19.80:0,20,138	0/0:5,0:5:8.95:0,9,99	0/0:29,0:29:43.46:0,43,359	0/0:12,0:12:19.85:0,20,144	0/0:11,0:11:23.52:0,24,167	1/1:12,0:12:28.29:191,28,0	0/0:4,0:4:11.93:0,12,89
chr10	106979570	.	C	CA	4230.68	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-12.148;DP=705;FS=0.763;HRun=7;HaplotypeScore=70.0376;InbreedingCoeff=0.9995;MQ=71.33;MQ0=0;MQRankSum=-0.655;QD=30.44;ReadPosRankSum=-1.475;VQSLOD=4.5184;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:87.12:0,87,834	1/1:1,11:12:30.09:362,30,0	0/0:33,0:27:28.49:0,28,371	0/0:28,0:27:31.32:0,31,404	0/0:37,0:37:99:0,99,949	0/0:25,0:25:72.02:0,72,671	0/0:21,0:21:54.05:0,54,510	1/1:4,29:33:87.24:1021,87,0	0/0:24,0:24:57.08:0,57,550	0/0:35,0:35:90.13:0,90,869	0/0:21,0:21:54.08:0,54,521	0/0:23,0:23:60.09:0,60,579	0/0:27,0:27:66.09:0,66,637	0/0:23,0:23:69.11:0,69,666	0/0:25,0:25:69.09:0,69,660	0/0:12,0:12:33.05:0,33,318	0/0:35,0:35:96.15:0,96,926	0/0:25,0:25:66.10:0,66,637	1/1:3,27:30:78.23:927,78,0	1/1:4,16:20:45.14:543,45,0	1/1:1,16:17:42.13:507,42,0	0/0:26,0:26:63.09:0,63,608	0/0:31,0:30:84.13:0,84,810	0/0:20,0:20:51.07:0,51,492	0/0:20,0:20:54.08:0,54,522	0/0:30,0:30:87.14:0,87,840	1/1:1,26:27:72.22:870,72,0	0/0:10,0:10:30.05:0,30,290
chr10	106980103	.	CGAG	C	5765.55	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.705;DP=609;FS=8.763;HRun=0;HaplotypeScore=94.6542;InbreedingCoeff=0.9946;MQ=87.10;MQ0=0;MQRankSum=-6.009;QD=44.35;ReadPosRankSum=0.972;VQSLOD=6.5709;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,3025	0/0:6,0:6:18.06:0,18,440	0/0:20,0:21:57.50:0,57,1374	0/0:24,0:24:69.19:0,69,1511	0/0:20,0:20:57.20:0,57,1350	0/0:28,0:28:84.26:0,84,1969	0/0:33,0:33:99:0,99,2439	1/1:0,23:23:69.22:1253,69,0	0/0:22,0:22:66.23:0,66,1625	0/0:22,0:22:63.22:0,63,1551	0/0:7,0:7:21.07:0,21,517	0/0:16,0:16:48.16:0,48,1157	0/0:12,0:12:36.11:0,36,838	0/0:27,0:27:81.26:0,81,1941	0/0:15,0:15:45.15:0,45,1109	0/0:10,0:10:30.10:0,30,715	0/0:25,0:25:75.26:0,75,1843	0/0:37,0:37:99:0,108,2649	1/1:0,11:11:33.11:603,33,0	1/1:0,13:13:23.97:412,24,0	1/1:0,59:59:99:2323,126,0	0/0:20,0:20:60.21:0,60,1475	0/0:22,0:22:63.22:0,63,1520	0/0:25,0:25:75.26:0,75,1832	0/0:15,0:15:45.15:0,45,1105	0/0:25,0:25:69.24:0,69,1701	1/1:0,24:24:63.22:1174,63,0	0/0:6,0:6:18.06:0,18,443
chr10	106980586	.	CCGACT	C	2403.13	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=9.894;DP=514;FS=4.570;HRun=0;HaplotypeScore=107.6782;InbreedingCoeff=0.9632;MQ=83.71;MQ0=0;MQRankSum=-9.456;QD=34.83;ReadPosRankSum=-0.872;VQSLOD=3.3558;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,3020	1/1:4,0:3:6.02:70,6,0	0/0:20,0:20:45.11:0,45,1090	0/0:13,0:13:30.10:0,30,825	0/0:25,0:25:63.22:0,63,1772	0/0:21,0:21:60.21:0,60,1798	0/0:23,0:23:63.20:0,63,1781	1/1:6,13:19:39.13:758,39,0	0/0:19,0:19:48.16:0,48,1322	0/0:16,0:16:45.15:0,45,1363	0/0:10,0:10:15.05:0,15,406	0/0:23,0:23:69.21:0,69,2019	0/0:17,0:17:45.15:0,45,1356	0/0:15,0:15:42.14:0,42,1256	0/0:20,0:20:60.21:0,60,1793	0/0:15,0:15:42.14:0,42,1232	0/0:33,0:33:78.27:0,78,2318	0/0:33,0:33:93.28:0,93,2672	1/1:1,13:14:39.13:770,39,0	./.	1/1:6,12:18:11.91:180,12,0	0/0:13,0:13:30.10:0,30,891	0/0:14,0:14:36.12:0,36,1062	0/0:30,0:30:84.29:0,84,2377	0/0:13,0:13:36.12:0,36,1090	0/0:20,0:20:54.16:0,54,1487	1/1:0,14:14:39.13:792,39,0	0/0:17,0:17:39.13:0,39,1139
chr10	106980652	.	AGT	A	153.79	PASS	AB=0.935;AC=14;AF=0.292;AN=48;BaseQRankSum=3.514;DP=446;FS=12.253;HRun=0;HaplotypeScore=62.0896;InbreedingCoeff=0.1048;MQ=61.01;MQ0=10;MQRankSum=-0.833;QD=0.84;ReadPosRankSum=1.247;VQSLOD=0.1735;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:23.12:23,0,80	1/1:5,0:6:5.68:28,6,0	./.	./.	0/0:15,0:15:9.02:0,9,111	1/1:15,0:18:2.57:14,3,0	0/0:22,0:22:6.02:0,6,88	./.	0/0:9,0:9:6.02:0,6,85	1/1:16,0:16:6.01:59,6,0	0/0:11,0:10:12.04:0,12,174	1/1:19,3:22:5.85:46,6,0	0/0:10,0:10:6.02:0,6,88	0/1:9,2:12:34.35:34,0,77	0/1:18,0:17:38.45:38,0,158	0/0:12,0:12:9.03:0,9,120	0/0:19,0:19:8.99:0,9,92	0/0:27,0:27:2.92:0,3,266	./.	0/0:8,0:8:6.02:0,6,88	0/0:34,1:33:15.05:0,15,202	0/0:7,0:7:3.01:0,3,44	0/0:5,0:5:6.02:0,6,88	0/1:31,2:32:5.33:5,0,188	0/0:6,0:6:3.01:0,3,44	0/0:10,0:10:6.02:0,6,78	0/1:12,1:13:23.21:23,0,79	0/1:15,1:15:22.74:23,0,80
chr10	106981552	.	GCT	G	127.67	PASS	AB=0.905;AC=3;AF=0.058;AN=52;BaseQRankSum=7.484;DP=837;FS=10.201;HRun=0;HaplotypeScore=141.5181;InbreedingCoeff=-0.0553;MQ=59.41;MQ0=0;MQRankSum=-5.771;QD=1.99;ReadPosRankSum=-2.778;VQSLOD=1.4739;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,1:50:99:0,148,2921	0/0:8,0:8:21.07:0,21,426	0/0:44,0:36:98.61:0,99,1874	0/0:33,0:31:89.11:0,89,1650	0/0:17,0:17:48.16:0,48,957	0/0:14,0:14:42.14:0,42,851	0/0:51,0:51:99:0,150,2948	./.	0/0:40,0:40:99:0,120,2396	0/0:40,0:40:99:0,116,2305	0/0:14,0:14:42.14:0,42,840	0/0:47,0:47:99:0,136,2706	0/0:28,0:28:84.28:0,84,1667	0/0:44,0:44:99:0,132,2619	0/0:44,0:44:99:0,132,2635	0/0:43,0:42:99:0,126,2533	0/0:50,0:50:99:0,147,2868	0/0:30,0:30:90.30:0,90,1768	0/1:8,0:8:30.41:30,0,116	./.	0/1:51,2:53:99:185,0,350	0/0:30,0:30:90.31:0,90,1819	0/0:21,0:21:59.99:0,60,1128	0/0:57,0:57:99:0,172,3365	0/0:23,0:23:65.96:0,66,1273	0/0:35,0:35:99:0,105,2054	0/1:2,1:3:4.43:4,0,32	0/0:10,0:10:30.10:0,30,606
chr10	106981554	.	T	TTG	2141.86	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=11.240;DP=868;FS=2.532;HRun=0;HaplotypeScore=139.2800;InbreedingCoeff=0.9863;MQ=59.01;MQ0=1;MQRankSum=-9.220;QD=29.75;ReadPosRankSum=-4.662;VQSLOD=3.9898;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:51:99:0,138,1929	0/0:8,0:8:21.07:0,21,294	0/0:46,0:36:67.56:0,68,1162	0/0:32,0:30:81.22:0,81,1072	0/0:17,0:17:42.14:0,42,588	0/0:16,0:16:45.14:0,45,613	0/0:54,0:54:99:0,141,1952	./.	0/0:41,0:41:99:0,117,1638	0/0:41,0:41:99:0,111,1522	0/0:16,0:16:39.13:0,39,546	0/0:46,0:46:99:0,132,1849	0/0:29,0:29:84.27:0,84,1160	0/0:45,0:45:99:0,126,1728	0/0:47,0:47:99:0,120,1681	0/0:42,1:42:99:0,114,1596	0/0:48,0:48:99:0,132,1847	0/0:31,1:32:36.29:0,36,1122	1/1:4,5:8:24.08:431,24,0	./.	1/1:14,45:59:98.98:1661,99,0	0/0:30,0:30:87.29:0,87,1218	0/0:22,0:22:54.17:0,54,738	0/0:55,1:56:99:0,106,2130	0/0:24,0:24:63.21:0,63,865	0/0:34,0:34:84.27:0,84,1161	1/1:2,2:4:12.03:187,12,0	0/0:15,0:15:30.10:0,30,420
chr10	106981558	.	G	GTGCA	817.99	PASS	AB=1.000;AC=5;AF=0.096;AN=52;BaseQRankSum=10.951;DP=881;FS=6.694;HRun=0;HaplotypeScore=175.1523;InbreedingCoeff=0.8162;MQ=58.11;MQ0=8;MQRankSum=-8.986;QD=11.05;ReadPosRankSum=-2.797;VQSLOD=2.4247;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:54:99:0,144,2912	0/0:8,0:8:24.08:0,24,474	0/0:45,0:34:69.78:0,70,1715	0/0:35,0:29:81.17:0,81,1555	0/0:17,0:17:48.16:0,48,961	0/0:18,0:18:54.17:0,54,1053	0/0:54,0:54:99:0,154,3097	./.	0/0:43,0:43:99:0,123,2534	0/0:43,0:43:99:0,129,2513	0/0:16,0:15:45.15:0,45,904	0/0:48,0:48:99:0,141,2878	0/0:30,0:30:87.29:0,87,1781	0/0:46,0:46:99:0,132,2669	0/0:47,0:47:99:0,132,2657	0/0:46,0:45:99:0,129,2590	0/0:49,0:49:99:0,144,2867	0/0:32,0:32:86.07:0,86,1842	1/1:8,3:9:21.91:240,22,0	./.	1/1:56,2:58:64.86:686,65,0	0/0:29,0:29:87.30:0,87,1820	0/0:20,0:20:54.19:0,54,1127	0/0:53,0:53:99:0,149,3240	0/0:23,0:23:69.23:0,69,1369	0/0:30,0:30:90.31:0,90,1806	0/1:5,0:5:7.52:19,0,8	0/0:15,0:15:45.15:0,45,842
chr10	106981872	.	ATG	A	2068.34	PASS	AB=0.938;AC=16;AF=0.296;AN=54;BaseQRankSum=12.476;DP=802;FS=0.856;HRun=0;HaplotypeScore=117.4895;InbreedingCoeff=0.4465;MQ=56.64;MQ0=10;MQRankSum=-1.388;QD=6.99;ReadPosRankSum=0.272;VQSLOD=3.4600;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,1:48:0.44:0,0,1392	0/0:11,0:13:9.46:0,9,76	./.	0/0:33,0:18:14.93:0,15,122	0/0:16,1:17:3.96:0,4,488	0/1:24,2:26:7.10:7,0,809	0/0:31,2:33:28.06:0,28,850	1/1:26,6:31:30.02:326,30,0	0/0:38,4:42:58.12:0,58,1318	0/0:35,3:37:14.84:0,15,1121	0/0:14,1:15:7.30:0,7,511	0/0:23,2:25:18.97:0,19,705	0/1:19,2:21:22.16:22,0,612	0/0:24,2:26:16.01:0,16,701	0/0:34,3:38:10.89:0,11,983	0/0:16,0:16:42.14:0,42,656	0/1:34,2:36:4.15:4,0,813	0/1:34,2:37:9.30:9,0,852	1/1:19,9:28:35.82:368,36,0	1/1:6,14:20:45:487,45,0	1/1:16,9:24:32:382,32,0	0/1:20,1:21:1.29:1,0,480	0/0:33,0:33:66.09:0,66,1003	0/0:35,2:37:43.07:0,43,1079	0/0:19,0:18:10.36:0,10,531	0/0:38,0:38:61.17:0,61,1390	1/1:9,18:28:56.92:614,57,0	0/1:21,1:22:21.14:21,0,576
chr10	106981910	.	G	GAGAGAC	6610.50	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-0.908;DP=772;FS=0.947;HRun=0;HaplotypeScore=171.5270;InbreedingCoeff=0.9976;MQ=61.87;MQ0=6;MQRankSum=-10.319;QD=50.46;ReadPosRankSum=-5.502;VQSLOD=3.3362;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,120,2272	1/1:4,2:7:18.06:545,18,0	0/0:38,0:19:30.58:0,31,469	0/0:53,0:30:33.85:0,34,707	0/0:18,0:18:48.16:0,48,983	0/0:28,0:28:75.24:0,75,1506	0/0:30,0:30:60.19:0,60,1205	1/1:15,14:33:69.24:1790,69,0	0/0:34,0:34:66.20:0,66,1260	0/0:29,0:29:60.20:0,60,1152	0/0:13,0:13:33.11:0,33,661	0/0:26,0:26:57.15:0,57,1096	0/0:20,0:20:57.19:0,57,1113	0/0:26,0:26:63.18:0,63,1222	0/0:36,0:36:81.23:0,81,1630	0/0:21,0:21:54.19:0,54,1143	0/0:31,0:31:75.21:0,75,1468	0/0:27,0:27:75.13:0,75,1398	1/1:10,9:21:39.13:1033,39,0	1/1:14,6:22:30.07:782,30,0	1/1:12,9:23:24.08:801,24,0	0/0:22,0:22:48.61:0,49,917	0/0:30,0:30:69.24:0,69,1421	0/0:32,0:32:69.24:0,69,1435	0/0:18,0:18:42.14:0,42,871	0/0:35,0:35:72.18:0,72,1346	1/1:12,13:25:54.17:1659,54,0	0/0:20,0:20:54.16:0,54,1021
chr10	106982498	.	TG	T	72.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.033;DP=559;FS=1.769;HRun=6;HaplotypeScore=67.6110;InbreedingCoeff=0.9472;MQ=84.08;MQ0=0;MQRankSum=-0.350;QD=14.56;ReadPosRankSum=0.156;VQSLOD=3.0807;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,156,1964	1/1:0,5:5:15.04:161,15,0	0/0:18,0:18:45.13:0,45,564	0/0:20,0:20:31.87:0,32,421	0/0:22,0:22:57.17:0,57,735	0/0:11,0:11:30.10:0,30,395	0/0:32,0:32:96.11:0,96,1176	0/0:24,0:24:66.19:0,66,830	0/0:18,0:18:54.16:0,54,696	0/0:19,0:19:51.17:0,51,671	0/0:15,0:15:39.08:0,39,465	0/0:11,0:11:30.10:0,30,395	0/0:13,0:13:39.12:0,39,499	0/0:18,0:18:54.18:0,54,710	0/0:22,0:22:63.19:0,63,814	0/0:16,0:16:45.13:0,45,578	0/0:26,0:25:75.23:0,75,973	0/0:17,0:17:42.08:0,42,515	0/0:26,0:26:72.20:0,72,905	0/0:12,0:12:24.06:0,24,300	0/0:39,0:39:99:0,105,1381	0/0:17,0:17:48.16:0,48,629	0/0:19,0:19:51.15:0,51,656	0/0:31,0:31:78.18:0,78,975	0/0:8,0:8:21.06:0,21,263	0/0:25,0:25:69.21:0,69,892	0/0:15,0:15:42.14:0,42,553	0/0:4,0:4:12.04:0,12,158
chr10	106982877	.	TG	T	749.96	PASS	AC=10;AF=0.200;AN=50;BaseQRankSum=3.933;DP=109;FS=0.000;HRun=6;HaplotypeScore=13.5513;InbreedingCoeff=0.5826;MQ=92.12;MQ0=0;MQRankSum=0.122;QD=19.23;ReadPosRankSum=2.277;VQSLOD=1.5808;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:7,0:7:18.06:0,18,235	0/0:8,0:8:3.91:0,4,143	0/0:1,0:1:3.01:0,3,39	0/0:3,0:3:9.03:0,9,118	0/0:11,0:11:21.03:0,21,258	1/1:2,7:9:21.05:224,21,0	./.	0/0:3,0:3:9.03:0,9,118	0/0:1,0:1:3.01:0,3,39	0/0:6,0:6:18.05:0,18,222	0/0:2,0:2:6:0,6,62	0/0:2,0:2:6.02:0,6,79	0/0:2,0:2:6.02:0,6,78	0/0:1,0:1:3.01:0,3,39	0/0:4,0:4:12.04:0,12,150	0/0:1,0:1:3.01:0,3,39	1/1:0,3:3:9.02:97,9,0	1/1:1,3:4:9.02:97,9,0	1/1:3,14:17:33.08:355,33,0	0/0:2,0:2:6.02:0,6,79	0/0:3,0:3:9.03:0,9,118	0/0:4,0:4:6.02:0,6,79	0/0:1,0:1:3.01:0,3,39	0/0:5,0:5:9.02:0,9,105	1/1:1,5:6:12.03:129,12,0	0/0:1,0:1:3.01:0,3,35
chr10	106983526	.	TG	T	886.99	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.198;DP=169;FS=0.000;HRun=2;HaplotypeScore=15.3379;InbreedingCoeff=0.6658;MQ=52.73;MQ0=22;MQRankSum=0.003;QD=21.63;ReadPosRankSum=0.870;VQSLOD=3.1724;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:9:27.09:0,27,367	0/0:1,0:1:0.47:0,0,1	0/0:12,0:4:12.04:0,12,164	0/0:10,0:3:6.02:0,6,82	0/0:3,0:3:9.02:0,9,107	0/0:2,0:1:3.01:0,3,41	0/0:9,0:8:18.53:0,19,246	1/1:1,5:5:15.05:194,15,0	0/0:5,0:5:15.05:0,15,208	0/0:3,0:3:9.03:0,9,123	0/0:3,0:3:9.03:0,9,123	0/0:7,0:6:17.92:0,18,219	0/0:6,0:6:15.04:0,15,188	0/0:7,0:6:18.04:0,18,228	0/0:4,0:3:9.03:0,9,122	0/0:2,0:2:6.02:0,6,82	0/0:9,0:8:24.08:0,24,327	0/0:8,0:8:24.06:0,24,308	1/1:6,6:9:16.90:231,17,0	1/1:0,2:2:3.01:39,3,0	1/1:4,14:17:35.94:499,36,0	0/0:2,0:2:3.01:0,3,41	0/0:5,0:4:6.02:0,6,81	0/0:8,0:6:11.82:0,12,163	0/0:1,0:1:3.01:0,3,40	0/0:7,0:6:18.06:0,18,245	1/1:1,2:2:6.02:78,6,0	0/0:4,0:4:12.04:0,12,163
chr10	106983770	.	CATGTGTGTGTGTGTGT	C	169.98	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.921;DP=443;FS=0.000;HRun=0;HaplotypeScore=171.4605;InbreedingCoeff=0.8758;MQ=66.15;MQ0=12;MQRankSum=-0.871;QD=34.00;ReadPosRankSum=0.575;VQSLOD=2.9347;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:51.11:0,51,2346	1/1:0,4:5:6.02:250,6,0	0/0:25,0:15:39.08:0,39,523	0/0:25,0:16:35.19:0,35,634	0/0:13,0:13:39.03:0,39,1541	0/0:10,0:10:30.06:0,30,1287	0/0:27,0:27:66.10:0,66,2353	0/0:24,0:22:66.09:0,66,1479	0/0:14,0:13:28.65:0,29,1749	0/0:22,0:22:66.01:0,66,2610	0/0:11,0:11:30.08:0,30,1792	0/0:15,0:15:33.05:0,33,921	0/0:12,0:12:30.50:0,31,1346	0/0:16,0:16:34.44:0,34,1993	0/0:18,0:18:45.02:0,45,1903	0/0:11,0:10:30.09:0,30,1672	0/0:12,0:11:30.09:0,30,1807	0/0:17,0:17:48.02:0,48,2419	0/0:12,0:12:36.02:0,36,1171	0/0:10,0:9:24.05:0,24,1226	0/0:10,0:9:24.04:0,24,868	0/0:10,0:10:27.06:0,27,1450	0/0:13,0:13:33.07:0,33,1730	0/0:25,0:21:54.08:0,54,2696	0/0:14,0:13:39.12:0,39,2438	0/0:19,0:18:53.56:0,54,1934	0/0:16,0:16:45.93:0,46,1901	0/0:13,0:12:36.12:0,36,2547
chr10	106984202	.	T	TG	325.46	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.076;DP=601;FS=1.215;HRun=3;HaplotypeScore=68.0131;InbreedingCoeff=0.9515;MQ=76.71;MQ0=0;MQRankSum=-0.878;QD=32.55;ReadPosRankSum=-0.461;VQSLOD=3.7373;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,1404	1/1:0,10:10:30.10:420,30,0	0/0:12,0:12:27.04:0,27,300	0/0:14,0:14:24.05:0,24,272	0/0:16,0:16:45.12:0,45,527	0/0:17,0:17:48.15:0,48,576	0/0:29,0:29:81.25:0,81,972	0/0:17,0:17:45.14:0,45,540	0/0:21,0:21:63.19:0,63,756	0/0:15,0:15:45.14:0,45,540	0/0:16,0:16:36.11:0,36,432	0/0:23,0:23:69.21:0,69,828	0/0:20,0:20:60.17:0,60,709	0/0:33,0:33:96.29:0,96,1152	0/0:31,0:31:90.28:0,90,1079	0/0:27,0:27:74.70:0,75,861	0/0:26,0:26:69.21:0,69,827	0/0:29,0:29:75.23:0,75,900	0/0:23,0:23:54.16:0,54,648	0/0:12,0:12:36.11:0,36,432	0/0:61,0:61:99:0,165,1943	0/0:10,0:10:30.09:0,30,360	0/0:9,0:9:12.04:0,12,144	0/0:32,0:32:90.28:0,90,1080	0/0:15,0:15:42.13:0,42,502	0/0:22,0:22:60.18:0,60,720	0/0:15,0:15:45.14:0,45,540	0/0:5,0:5:15.05:0,15,180
chr10	106984776	.	TCAAGTCTGGA	T	373.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.767;DP=565;FS=3.891;HRun=0;HaplotypeScore=167.6764;InbreedingCoeff=0.9822;MQ=87.43;MQ0=0;MQRankSum=-3.197;QD=62.26;ReadPosRankSum=1.619;VQSLOD=3.6563;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,166,8592	1/1:2,4:6:15.05:462,15,0	0/0:17,0:17:48.16:0,48,2133	0/0:28,0:28:81.24:0,81,3555	0/0:17,0:17:51.18:0,51,2668	0/0:13,0:13:39.13:0,39,1887	0/0:20,0:20:60.21:0,60,2937	0/0:16,0:16:48.16:0,48,2292	0/0:19,0:19:57.20:0,57,3065	0/0:22,0:22:66.23:0,66,3562	0/0:16,0:16:48.16:0,48,2440	0/0:16,0:16:48.16:0,48,2361	0/0:17,0:17:51.18:0,51,2651	0/0:15,0:15:42.14:0,42,2123	0/0:22,0:20:60.19:0,60,2998	0/0:12,0:12:36.11:0,36,1774	0/0:32,0:32:93.32:0,93,4904	0/0:25,0:25:75.24:0,75,3606	0/0:18,0:18:51.17:0,51,2679	0/0:15,0:15:45.15:0,45,2229	0/0:40,0:40:99:0,111,5783	0/0:16,0:16:48.16:0,48,2405	0/0:15,0:15:45.15:0,45,2299	0/0:33,0:33:96.33:0,96,4895	0/0:10,0:10:30.10:0,30,1572	0/0:21,0:21:57.20:0,57,2878	0/0:17,0:17:42.57:0,43,2020	0/0:9,0:9:27.09:0,27,1380
chr10	106984794	.	CTCTGCATTGTTCA	C	404.87	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.837;DP=542;FS=2.001;HRun=0;HaplotypeScore=195.2863;InbreedingCoeff=0.9620;MQ=92.05;MQ0=0;MQRankSum=-2.411;QD=101.22;ReadPosRankSum=0.898;VQSLOD=3.7641;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,153,9145	1/1:0,4:4:12.04:491,12,0	0/0:21,0:21:63.22:0,63,3580	0/0:28,0:28:78.26:0,78,4551	0/0:20,0:20:60.21:0,60,3939	0/0:16,0:16:45.15:0,45,2877	0/0:18,0:18:54.19:0,54,3285	0/0:25,0:25:72.25:0,72,4373	0/0:20,0:20:60.19:0,60,3511	0/0:22,0:22:66.23:0,66,4262	0/0:14,0:14:42.14:0,42,2735	0/0:13,0:13:39.13:0,39,2609	0/0:15,0:15:45.15:0,45,2912	0/0:11,0:11:33.10:0,33,2013	0/0:20,0:18:54.19:0,54,3616	0/0:10,0:10:30.10:0,30,1834	0/0:33,0:33:99:0,99,6207	0/0:22,0:22:63.19:0,63,3933	0/0:16,0:16:42.14:0,42,2339	0/0:14,0:14:39.12:0,39,2180	0/0:37,0:37:93.19:0,93,6042	0/0:15,0:15:39.13:0,39,2445	0/0:15,0:15:45.15:0,45,2898	0/0:31,0:31:90.31:0,90,5838	0/0:10,0:10:30.09:0,30,1636	0/0:16,0:16:45.15:0,45,2709	0/0:14,0:14:26.85:0,27,1742	0/0:8,0:8:21.04:0,21,631
chr10	106984838	.	C	CT	940.18	PASS	AB=0.786;AC=11;AF=0.196;AN=56;BaseQRankSum=1.879;DP=544;FS=3.950;HRun=13;HaplotypeScore=74.1176;InbreedingCoeff=0.5568;MQ=70.13;MQ0=1;MQRankSum=-1.606;QD=5.77;ReadPosRankSum=-3.062;VQSLOD=1.9106;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:41:70.12:0,70,469	1/1:6,0:6:8.23:63,8,0	0/0:14,0:8:11.39:0,11,76	0/0:18,0:14:11.62:0,12,72	0/0:22,0:22:29:0,29,213	0/0:13,1:14:6.85:0,7,180	0/0:13,0:14:30.04:0,30,221	1/1:16,17:34:7.36:348,7,0	0/0:14,0:14:22.45:0,22,147	0/0:26,0:26:10.10:0,10,225	0/0:17,0:18:29.54:0,30,192	0/0:13,0:13:26.54:0,27,184	0/0:18,0:19:38.53:0,39,237	0/0:13,0:13:28.43:0,28,184	0/0:20,0:18:36.86:0,37,250	0/0:12,0:12:26.54:0,27,178	0/1:33,4:38:3.43:3,0,392	0/0:18,0:19:34.55:0,35,225	0/1:24,5:29:51.72:230,0,52	1/1:3,11:14:4.65:156,5,0	0/1:7,10:18:5.67:97,0,6	0/0:17,0:17:3.31:0,3,157	0/0:16,1:17:4.80:0,5,177	0/0:23,0:26:48.32:0,48,309	0/0:17,0:17:29.83:0,30,209	0/0:17,0:18:21.76:0,22,164	1/1:8,14:23:24.27:195,24,0	0/0:8,0:8:20.82:0,21,144
chr10	106985557	.	G	GTGTCTGTC	2149.32	PASS	AB=0.679;AC=9;AF=0.161;AN=56;BaseQRankSum=-1.178;DP=739;FS=2.557;HRun=0;HaplotypeScore=185.2621;InbreedingCoeff=0.7582;MQ=53.77;MQ0=19;MQRankSum=-4.601;QD=17.19;ReadPosRankSum=-5.169;VQSLOD=1.7142;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:56:99:0,105,2122	1/1:1,0:10:6.91:181,7,0	0/0:27,0:9:3.01:0,3,54	0/0:34,0:11:21.06:0,21,353	0/0:13,0:13:30.07:0,30,561	0/0:27,0:26:47.96:0,48,810	0/0:27,0:27:57.11:0,57,1054	1/1:44,0:42:81.93:1024,82,0	0/0:27,0:27:72.22:0,72,1618	0/0:30,0:30:60.16:0,60,1213	0/0:13,0:13:21.05:0,21,391	0/0:19,0:19:48.16:0,48,1021	0/0:18,0:18:39.13:0,39,820	0/0:20,0:20:39.10:0,39,699	0/0:30,0:30:72.20:0,72,1445	0/0:21,0:21:42.13:0,42,882	0/0:43,0:43:99:0,102,2169	0/0:22,0:22:51:0,51,904	1/1:14,13:30:45:723,45,0	1/1:9,0:21:8.10:133,8,0	0/0:22,25:55:0.16:0,0,0	0/0:20,0:20:48.14:0,48,1009	0/0:14,0:14:20.76:0,21,366	0/0:36,0:36:69.12:0,69,1401	0/0:17,0:17:36.09:0,36,737	0/0:25,0:25:51.15:0,51,847	0/1:10,1:18:36.61:241,0,37	0/0:15,0:15:27.09:0,27,535
chr10	106986236	.	C	CGTGTGTGTGTGTGTGTGT	2392.96	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=3.068;DP=926;FS=7.697;HRun=0;HaplotypeScore=385.7992;InbreedingCoeff=0.9165;MQ=57.27;MQ0=7;MQRankSum=-4.849;QD=16.62;ReadPosRankSum=-4.680;VQSLOD=0.2758;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:69.59:0,70,3615	1/1:3,0:16:2.75:180,3,0	0/0:38,0:18:17.89:0,18,241	0/0:41,0:27:30.42:0,30,256	0/0:31,0:31:70.49:0,70,2733	0/0:28,0:28:69.08:0,69,2633	0/0:45,0:45:95.26:0,95,3325	1/1:35,0:33:62.92:873,63,0	0/0:37,0:38:56.51:0,57,2718	0/0:31,0:31:87.18:0,87,3030	0/0:24,0:24:57.06:0,57,1917	0/0:38,0:38:49:0,49,2376	0/0:29,0:29:65.79:0,66,2237	0/0:36,0:36:68.71:0,69,2056	0/0:44,0:44:90.08:0,90,3158	0/0:25,0:26:63.07:0,63,1951	0/0:42,0:44:99:0,99,4137	0/0:32,0:32:72.03:0,72,2568	1/1:16,0:15:42.01:993,42,0	1/1:26,0:26:17.93:235,18,0	1/1:50,0:50:32.10:276,32,0	0/0:38,0:38:99:0,105,2971	0/0:23,0:23:62.44:0,62,1714	0/0:45,0:45:99:0,120,3729	0/0:30,0:30:78.05:0,78,2635	0/0:34,0:34:84.08:0,84,2348	0/0:4,14:25:0.89:0,1,2	0/0:16,0:16:45.09:0,45,1951
chr10	106989177	.	GAAAT	G	1546.23	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=7.231;DP=371;FS=0.687;HRun=0;HaplotypeScore=63.3370;InbreedingCoeff=0.7469;MQ=58.91;MQ0=0;MQRankSum=-2.327;QD=21.48;ReadPosRankSum=-1.051;VQSLOD=3.1749;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:72.19:0,72,1567	0/0:4,0:4:1.25:0,1,3	./.	0/0:13,0:13:8.67:0,9,124	0/0:21,0:21:45.15:0,45,1103	0/0:21,0:21:45.15:0,45,1104	0/0:8,0:8:12.04:0,12,287	1/1:11,5:16:15.04:224,15,0	0/0:13,0:13:15.05:0,15,360	0/0:20,0:20:39.13:0,39,951	0/0:15,0:15:33.11:0,33,736	0/0:2,0:6:3.01:0,3,53	0/0:8,0:8:12.04:0,12,294	0/0:8,0:8:18.06:0,18,441	0/0:9,0:9:18.06:0,18,422	0/0:5,0:5:3.01:0,3,74	0/0:22,0:22:54.16:0,54,1273	0/0:28,0:27:75.19:0,75,1756	1/1:14,7:19:24.08:396,24,0	1/1:4,7:11:24.95:373,25,0	1/1:6,1:7:2.46:91,2,0	./.	0/0:9,0:9:9.92:0,10,185	0/0:7,0:7:6.02:0,6,147	0/0:17,0:17:39.13:0,39,935	0/0:14,0:14:33.10:0,33,757	1/1:4,13:17:39.13:619,39,0	0/0:3,0:3:3.01:0,3,74
chr10	106989205	.	T	TAA	3057.94	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-1.908;DP=408;FS=0.000;HRun=10;HaplotypeScore=59.1550;InbreedingCoeff=0.9337;MQ=61.68;MQ0=2;MQRankSum=-3.260;QD=30.89;ReadPosRankSum=-1.995;VQSLOD=3.2970;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:69.02:0,69,675	0/0:2,0:2:6.01:0,6,61	0/0:13,0:5:14.64:0,15,110	0/0:12,0:7:17.22:0,17,156	0/0:21,0:21:54.06:0,54,536	0/0:18,0:18:48.09:0,48,488	0/0:5,0:5:12.02:0,12,121	1/1:6,24:30:69.22:1004,69,0	0/0:8,0:8:15.02:0,15,152	0/0:19,0:19:45.05:0,45,458	0/0:16,0:17:35.80:0,36,342	0/0:6,0:6:14.95:0,15,139	0/0:12,0:12:36.08:0,36,365	0/0:14,0:14:39.08:0,39,397	0/0:10,0:10:21.01:0,21,214	0/0:4,0:4:12.03:0,12,122	0/0:28,0:29:68.84:0,69,683	0/0:26,0:27:71.58:0,72,681	1/1:4,21:24:63.21:931,63,0	1/1:3,7:10:21.03:285,21,0	1/1:1,9:11:19.31:269,19,0	0/0:5,0:5:15.03:0,15,153	0/0:9,0:9:17.99:0,18,175	0/0:5,0:5:15.03:0,15,152	0/0:17,0:17:48.08:0,48,480	0/0:22,0:22:57.10:0,57,569	1/1:3,18:23:51.17:743,51,0	0/0:5,0:5:15.03:0,15,152
chr10	106991340	.	T	TGATA	1915.61	PASS	AB=0.973;AC=9;AF=0.173;AN=52;BaseQRankSum=-7.358;DP=699;FS=2.435;HRun=0;HaplotypeScore=154.3776;InbreedingCoeff=0.8714;MQ=55.02;MQ0=22;MQRankSum=1.489;QD=14.97;ReadPosRankSum=1.404;VQSLOD=3.6153;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:29:48.11:0,48,700	0/0:14,0:14:20.98:0,21,186	./.	./.	1/1:14,17:33:23.95:536,24,0	1/1:8,11:19:18.06:425,18,0	0/0:13,0:14:17.83:0,18,245	0/0:36,0:31:15:0,15,139	0/0:25,0:25:54.15:0,54,797	0/1:35,1:35:7.68:8,0,839	0/0:24,0:24:33.11:0,33,515	1/1:10,3:13:21.07:493,21,0	0/0:21,0:21:42.14:0,42,655	0/0:16,0:16:33.10:0,33,481	1/1:9,16:26:27.09:614,27,0	0/0:21,0:21:39.12:0,39,587	0/0:20,0:20:27.05:0,27,384	0/0:18,0:17:36.09:0,36,527	0/0:23,0:19:30.03:0,30,279	0/0:50,0:50:76.60:0,77,594	0/0:22,0:21:23.88:0,24,215	0/0:22,0:22:33.10:0,33,494	0/0:31,0:31:45.15:0,45,702	0/0:18,0:18:33:0,33,515	0/0:35,0:35:75.25:0,75,1149	0/0:34,0:33:51.17:0,51,771	0/0:54,0:53:89.60:0,90,781	0/0:13,0:12:33.11:0,33,515
chr10	106991359	.	TA	T	5753.56	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=12.786;DP=685;FS=5.374;HRun=1;HaplotypeScore=114.3969;InbreedingCoeff=0.9995;MQ=54.09;MQ0=28;MQRankSum=-6.062;QD=30.44;ReadPosRankSum=-2.127;VQSLOD=3.8864;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:86.84:0,87,1278	1/1:0,12:12:24.08:335,24,0	./.	./.	0/0:33,0:33:71.65:0,72,924	0/0:25,0:24:57.16:0,57,764	0/0:15,0:14:33.58:0,34,516	1/1:2,29:23:69.12:872,69,0	0/0:25,0:25:75.25:0,75,1170	0/0:36,0:35:99:0,105,1636	0/0:21,0:21:60.20:0,60,947	0/0:14,0:14:42.11:0,42,524	0/0:24,0:24:66.21:0,66,1014	0/0:18,0:18:54.18:0,54,845	0/0:25,0:25:48.11:0,48,577	0/0:18,0:18:51.17:0,51,802	0/0:20,0:20:48.15:0,48,733	0/0:23,0:21:60.20:0,60,933	1/1:3,14:15:45.10:601,45,0	1/1:9,40:49:99:1427,111,0	1/1:2,17:18:40.38:547,40,0	0/0:23,0:23:66.22:0,66,1027	0/0:26,0:26:75.24:0,75,1159	0/0:16,0:16:39.13:0,39,622	0/0:34,0:34:99:0,102,1614	0/0:28,0:27:84.29:0,84,1320	1/1:6,55:60:99:1972,147,0	0/0:15,0:15:45.15:0,45,705
chr10	106991420	.	TGATA	T	963.33	PASS	AB=0.892;AC=9;AF=0.180;AN=50;BaseQRankSum=7.632;DP=641;FS=10.215;HRun=0;HaplotypeScore=162.7916;InbreedingCoeff=0.3428;MQ=52.49;MQ0=17;MQRankSum=-1.696;QD=4.97;ReadPosRankSum=-0.789;VQSLOD=2.0974;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:33.11:0,33,735	0/1:8,0:12:22.70:28,0,23	./.	./.	0/1:16,10:26:37.28:431,0,37	0/0:26,0:26:42.14:0,42,911	0/0:19,0:18:16.66:0,17,460	0/0:53,0:42:6.02:0,6,95	0/0:15,0:21:30.10:0,30,614	0/0:31,0:31:45.15:0,45,1024	0/0:25,0:25:39.13:0,39,886	./.	0/0:20,0:20:36.12:0,36,819	0/0:15,0:15:18.06:0,18,421	0/0:14,0:14:24.08:0,24,561	0/0:19,0:19:27.09:0,27,634	0/0:17,0:17:20.96:0,21,430	0/0:29,0:30:15.32:0,15,459	1/1:17,0:13:2.04:6,2,0	0/1:53,0:51:3.65:4,0,120	0/0:18,0:16:1.56:0,2,5	0/0:18,0:18:27.08:0,27,539	1/1:8,11:19:24.04:345,24,0	0/1:10,6:17:1.97:274,0,2	0/0:22,0:22:33.11:0,33,752	0/0:31,0:31:63.22:0,63,1479	0/1:50,0:48:1.15:1,0,119	0/0:17,0:17:24.08:0,24,563
chr10	106991443	.	TA	T	165.87	PASS	AB=1.000;AC=3;AF=0.058;AN=52;BaseQRankSum=5.062;DP=564;FS=2.131;HRun=1;HaplotypeScore=119.3497;InbreedingCoeff=0.6083;MQ=52.18;MQ0=32;MQRankSum=-1.160;QD=8.73;ReadPosRankSum=-2.642;VQSLOD=0.2102;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:73.47:0,73,1115	0/1:9,0:9:39.66:40,0,147	./.	./.	0/0:24,0:24:53.25:0,53,548	0/0:24,0:23:72.24:0,72,1125	0/0:22,0:23:43.84:0,44,750	0/0:31,0:17:47.96:0,48,597	0/0:18,0:18:48.14:0,48,661	0/0:33,0:33:99:0,99,1518	0/0:25,0:25:75.26:0,75,1170	1/1:6,4:8:23.59:230,24,0	0/0:21,0:21:54.17:0,54,823	0/0:12,0:12:36.09:0,36,515	0/0:16,0:16:48.15:0,48,720	0/0:17,0:17:47.89:0,48,722	0/0:19,0:19:44.94:0,45,661	0/0:27,1:26:39.23:0,39,945	0/0:8,0:5:15.01:0,15,182	0/0:31,0:29:61.71:0,62,824	0/0:13,0:12:8.67:0,9,106	0/0:18,0:18:54.18:0,54,843	0/0:19,0:19:34.96:0,35,367	0/0:15,0:15:23.99:0,24,206	0/0:20,0:20:57.16:0,57,854	0/0:30,0:30:90.31:0,90,1421	0/0:34,0:33:66.18:0,66,745	0/0:13,0:13:39.13:0,39,611
chr10	106991444	.	AG	A	232.60	PASS	AB=0.750;AC=3;AF=0.058;AN=52;BaseQRankSum=5.288;DP=560;FS=0.000;HRun=1;HaplotypeScore=118.6524;InbreedingCoeff=0.6062;MQ=52.19;MQ0=33;MQRankSum=0.040;QD=12.24;ReadPosRankSum=-2.813;VQSLOD=1.1570;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:72.24:0,72,1114	0/1:6,3:9:99:101,0,143	./.	./.	0/0:25,0:25:56.25:0,56,571	0/0:25,0:24:75.24:0,75,1149	0/0:21,0:21:39.76:0,40,724	0/0:29,0:16:44.34:0,44,542	0/0:18,0:18:48.14:0,48,662	0/0:33,0:33:99:0,99,1534	0/0:25,0:25:75.26:0,75,1170	1/1:6,4:8:23.74:235,24,0	0/0:21,0:21:54.18:0,54,839	0/0:10,0:10:30.10:0,30,467	0/0:15,0:15:45.15:0,45,695	0/0:16,0:16:45.15:0,45,697	0/0:19,0:19:44.82:0,45,639	0/0:28,0:26:51.45:0,51,947	0/0:8,0:5:14.94:0,15,172	0/0:31,0:29:58.66:0,59,799	0/0:13,0:12:8.47:0,8,102	0/0:18,0:18:54.18:0,54,841	0/0:20,0:20:37.95:0,38,392	0/0:14,0:14:21:0,21,186	0/0:19,0:19:54.18:0,54,848	0/0:32,0:32:93.31:0,93,1448	0/0:34,0:33:62.22:0,62,709	0/0:13,0:13:39.13:0,39,613
chr10	106991465	.	GATAAT	G	270.98	PASS	AB=0.933;AC=9;AF=0.161;AN=56;BaseQRankSum=5.307;DP=519;FS=1.052;HRun=0;HaplotypeScore=128.1679;InbreedingCoeff=0.2257;MQ=53.51;MQ0=35;MQRankSum=-5.271;QD=2.74;ReadPosRankSum=-0.892;VQSLOD=1.9753;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:68.96:0,69,1473	1/1:4,0:6:5.75:64,6,0	0/0:15,0:1:3.01:0,3,42	0/0:14,0:1:3.01:0,3,30	0/0:28,0:28:83.86:0,84,1317	0/0:26,0:25:66.21:0,66,1733	0/0:21,0:21:53.42:0,53,1205	0/1:16,0:10:25.77:26,0,249	0/0:16,0:16:45.10:0,45,1163	0/0:37,0:37:99:0,108,2904	0/0:23,0:23:69.24:0,69,1813	0/0:11,0:9:27.09:0,27,604	0/0:18,0:18:51.18:0,51,1402	0/0:14,0:14:42.13:0,42,1036	0/0:20,0:20:60.19:0,60,1522	0/0:20,0:20:60.21:0,60,1586	0/1:18,0:17:10.26:10,0,822	0/1:20,0:18:8.01:8,0,824	0/1:7,1:3:54.86:55,0,142	1/1:10,7:15:6.06:128,6,0	0/0:3,2:5:5.59:0,6,93	0/0:18,0:18:48.16:0,48,1291	0/0:20,0:20:47.93:0,48,722	0/0:16,0:16:33.16:0,33,422	0/0:21,0:21:60.14:0,60,1623	0/0:35,0:35:99:0,105,2891	0/1:10,4:13:12.08:116,0,12	0/0:14,0:14:42.08:0,42,1122
chr10	106991493	.	T	TA	552.15	PASS	AB=0.857;AC=6;AF=0.111;AN=54;BaseQRankSum=6.463;DP=510;FS=12.218;HRun=1;HaplotypeScore=88.8782;InbreedingCoeff=0.1939;MQ=58.06;MQ0=8;MQRankSum=-2.838;QD=9.05;ReadPosRankSum=-3.782;VQSLOD=-0.7547;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:56.78:0,57,796	./.	0/0:15,0:6:18.06:0,18,251	0/0:13,0:6:3.13:0,3,92	0/0:28,0:27:75.24:0,75,1032	0/0:21,0:20:60.18:0,60,818	0/0:18,0:18:45.61:0,46,612	0/1:8,1:7:30.21:30,0,75	0/0:20,0:20:57.18:0,57,780	0/0:44,0:44:99:0,129,1774	0/0:22,0:22:63.21:0,63,879	0/0:18,0:16:48.16:0,48,671	0/0:15,0:15:45.15:0,45,628	0/0:20,0:20:60.20:0,60,839	0/0:23,0:23:63.21:0,63,881	0/0:22,0:22:63.21:0,63,880	0/1:14,0:14:6.80:7,0,347	0/0:12,0:11:27.07:0,27,359	0/1:6,1:6:97.66:98,0,108	1/1:6,10:14:12.04:191,12,0	0/0:9,3:10:2.16:0,2,23	0/0:20,0:20:57.19:0,57,797	0/0:17,0:17:39.13:0,39,545	0/0:11,1:12:26.67:0,27,365	0/0:23,0:23:66.22:0,66,923	0/0:30,0:30:90.29:0,90,1244	0/1:7,8:15:32.54:348,0,33	0/0:16,0:16:48.16:0,48,669
chr10	106991631	.	TGATG	T	2302.18	PASS	AB=0.962;AC=13;AF=0.232;AN=56;BaseQRankSum=9.828;DP=625;FS=8.879;HRun=0;HaplotypeScore=123.7578;InbreedingCoeff=0.9004;MQ=56.60;MQ0=9;MQRankSum=-3.962;QD=16.44;ReadPosRankSum=-1.690;VQSLOD=2.3203;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:27.09:0,27,624	1/1:4,0:10:8.91:74,9,0	0/0:35,0:12:12.03:0,12,242	0/0:35,0:24:26.72:0,27,493	0/0:28,0:28:54.06:0,54,1038	0/0:28,0:28:72.19:0,72,1550	0/0:12,0:12:12.50:0,13,245	1/1:12,9:20:24:263,24,0	0/0:25,0:25:57.16:0,57,1285	0/0:34,0:34:65.99:0,66,1394	0/1:24,1:25:1.03:1,0,830	0/0:19,0:19:42.10:0,42,877	0/0:17,0:17:33.07:0,33,612	0/0:19,0:19:48.14:0,48,1070	0/0:28,0:28:63.22:0,63,1515	0/0:29,0:29:63.17:0,63,1304	0/0:16,0:16:36.09:0,36,774	0/0:15,0:15:45:0,45,757	1/1:8,1:8:9:118,9,0	1/1:7,17:24:51.11:761,51,0	1/1:12,13:25:36.08:503,36,0	0/0:19,0:19:45.14:0,45,1047	0/0:22,0:22:45.15:0,45,1082	0/0:11,0:11:11.99:0,12,268	0/0:28,0:28:60.16:0,60,1273	0/0:35,0:35:66.19:0,66,1396	1/1:8,18:26:51.16:763,51,0	0/0:14,0:14:27.55:0,28,699
chr10	106991675	.	TATAGATAGATAGATAGATAG	T	2290.93	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=9.242;DP=685;FS=0.645;HRun=0;HaplotypeScore=304.1539;InbreedingCoeff=0.7016;MQ=57.26;MQ0=55;MQRankSum=-7.759;QD=20.83;ReadPosRankSum=0.090;VQSLOD=1.9262;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:35.60:0,36,1754	0/0:5,0:7:0.29:0,0,41	./.	0/0:57,0:12:2.97:0,3,25	0/0:11,0:29:36.12:0,36,1560	0/0:25,0:24:51.18:0,51,3157	0/0:8,0:8:18.06:0,18,768	1/1:16,14:28:42.06:662,42,0	0/0:28,0:29:72.25:0,72,4682	0/0:26,0:26:54.17:0,54,2876	0/0:21,0:21:39.13:0,39,2803	0/0:24,0:24:63.22:0,63,3627	0/0:12,0:12:27.09:0,27,1743	0/0:25,0:25:57.16:0,57,2978	0/0:32,0:32:66.23:0,66,3654	0/0:33,0:33:75.26:0,75,4886	0/0:20,0:20:36.12:0,36,2418	0/1:18,0:19:23.37:23,0,2726	1/1:5,0:4:3.01:109,3,0	1/1:14,15:29:23.82:616,24,0	0/0:16,0:17:0:0,0,0	0/0:23,0:23:57.17:0,57,2953	0/0:20,0:20:39.12:0,39,1863	0/0:18,0:18:29.44:0,29,1906	0/0:23,0:23:48.16:0,48,2621	0/0:21,0:21:45.15:0,45,2486	1/1:17,10:25:28.50:1032,29,0	0/0:15,0:15:36.12:0,36,1971
chr10	106991757	.	ATAGG	A	2742.46	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.131;DP=630;FS=13.569;HRun=0;HaplotypeScore=129.7233;InbreedingCoeff=0.9628;MQ=53.35;MQ0=12;MQRankSum=-7.679;QD=19.04;ReadPosRankSum=-1.655;VQSLOD=2.5053;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:57.05:0,57,1148	1/1:6,5:9:13.45:179,13,0	0/0:9,0:3:6:0,6,101	0/0:11,0:4:12:0,12,175	0/0:27,0:27:57.15:0,57,1300	0/0:20,0:20:57.15:0,57,1312	0/0:18,0:18:51.12:0,51,1086	1/1:15,31:37:83.94:1008,84,0	0/0:25,0:25:63.19:0,63,1517	0/0:30,0:30:81.20:0,81,1633	0/0:34,0:34:87.25:0,87,2038	0/0:26,0:26:72.13:0,72,1521	0/0:22,0:22:60.17:0,60,1338	0/0:27,0:27:75.04:0,75,1322	0/0:24,0:24:63.08:0,63,1179	0/0:20,0:20:54.14:0,54,1160	0/0:14,0:14:13.70:0,14,465	0/0:16,0:16:48.12:0,48,1074	1/1:3,9:10:26.91:410,27,0	1/1:15,18:32:28.90:462,29,0	1/1:7,9:15:23.82:312,24,0	0/0:28,0:28:63.15:0,63,1372	0/0:17,0:17:45.11:0,45,983	0/0:20,0:20:38.93:0,39,790	0/0:29,0:29:57.36:0,57,1563	0/0:31,0:31:93.22:0,93,1874	1/1:13,13:24:35.85:558,36,0	0/0:10,0:10:24.04:0,24,514
chr10	106991953	.	T	TATAG	1238.76	PASS	AB=0.932;AC=13;AF=0.232;AN=56;BaseQRankSum=-1.728;DP=727;FS=1.153;HRun=0;HaplotypeScore=125.6088;InbreedingCoeff=0.5055;MQ=59.01;MQ0=27;MQRankSum=-0.763;QD=4.67;ReadPosRankSum=-0.710;VQSLOD=2.3249;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:10.82:0,11,730	1/1:14,0:14:13.58:183,14,0	0/1:56,0:20:24.87:25,0,38	0/1:33,0:15:0.78:1,0,23	0/0:21,0:21:45.13:0,45,671	0/0:24,0:24:42.12:0,42,617	0/0:18,0:17:9.88:0,10,217	1/1:39,0:37:42.01:374,42,0	0/0:32,0:32:63.08:0,63,765	0/0:30,0:29:47.56:0,48,761	0/0:23,0:23:47.74:0,48,543	0/1:14,14:28:6.09:342,0,6	0/0:23,0:23:45.12:0,45,651	0/0:20,0:20:42.09:0,42,575	0/0:27,0:27:45.09:0,45,606	0/0:24,0:24:48.08:0,48,590	0/0:16,0:16:30.05:0,30,386	0/0:18,0:18:30.06:0,30,411	1/1:18,0:16:5.63:48,6,0	0/1:31,0:30:30.25:94,0,30	1/1:21,0:21:11.83:158,12,0	0/0:25,0:25:51.08:0,51,634	0/0:19,0:19:42.01:0,42,503	0/0:18,0:18:30.07:0,30,434	0/0:31,0:31:72.13:0,72,928	0/0:38,0:38:72.19:0,72,1004	0/1:24,0:22:23.99:179,0,24	0/0:23,0:22:63.06:0,63,858
chr10	106991983	.	TTG	T	412.38	PASS	AB=0.836;AC=5;AF=0.089;AN=56;BaseQRankSum=11.664;DP=696;FS=0.000;HRun=0;HaplotypeScore=99.8563;InbreedingCoeff=0.0862;MQ=56.63;MQ0=12;MQRankSum=2.597;QD=3.20;ReadPosRankSum=-1.105;VQSLOD=2.1526;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:87.21:0,87,1628	0/0:8,0:9:14.94:0,15,133	0/0:32,1:14:36.02:0,36,539	0/0:26,0:15:28.98:0,29,545	0/0:22,0:22:63.20:0,63,1242	0/0:27,0:27:78.27:0,78,1524	0/0:11,0:10:30.08:0,30,536	0/1:40,0:37:20.10:20,0,250	0/0:32,0:32:96.33:0,96,1794	0/0:35,0:34:99:0,102,1968	0/0:23,0:23:69.24:0,69,1263	0/0:26,0:25:51.17:0,51,885	0/0:25,0:25:75.26:0,75,1454	0/0:21,0:21:63.20:0,63,1178	0/0:19,0:19:57.19:0,57,1067	0/0:26,0:26:78.27:0,78,1463	0/0:15,0:15:45.15:0,45,876	0/0:21,0:21:60.21:0,60,1159	0/1:13,2:8:0.26:83,0,0	0/1:13,11:23:51.94:195,0,52	0/1:15,5:20:97.36:97,0,126	0/0:30,0:30:90.31:0,90,1690	0/0:20,0:20:57.18:0,57,1053	0/0:21,0:21:60.21:0,60,1175	0/0:30,0:30:90.31:0,90,1703	0/0:38,0:38:99:0,114,2194	0/1:23,7:29:99:134,0,165	0/0:26,0:25:75.26:0,75,1454
chr10	106992602	.	CT	C	1437.79	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=5.078;DP=395;FS=1.155;HRun=3;HaplotypeScore=49.2722;InbreedingCoeff=0.8466;MQ=78.73;MQ0=1;MQRankSum=-2.529;QD=14.98;ReadPosRankSum=0.785;VQSLOD=2.8665;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:41.91:0,42,391	1/1:1,0:1:2.90:16,3,0	0/0:31,0:20:26.41:0,26,236	0/1:17,0:13:33.19:33,0,36	0/0:18,0:18:39.78:0,40,400	0/0:10,0:10:20.86:0,21,249	0/0:25,0:25:58.51:0,59,735	1/1:2,9:11:21.17:256,21,0	0/0:18,0:18:36.07:0,36,428	0/0:15,0:15:33.07:0,33,385	0/0:8,0:8:15.05:0,15,197	0/0:11,0:11:20.79:0,21,186	0/0:15,0:15:39.05:0,39,448	0/0:11,0:11:33.02:0,33,372	0/0:18,0:18:49.34:0,49,543	0/0:13,0:13:34.70:0,35,459	0/0:22,0:22:66.07:0,66,730	0/0:11,0:11:24.04:0,24,295	1/1:4,6:10:21:190,21,0	1/1:6,7:13:14.80:143,15,0	1/1:11,12:23:32.40:494,32,0	0/0:12,0:12:28.79:0,29,326	0/0:7,0:7:20.99:0,21,214	0/0:14,0:14:33.08:0,33,406	0/0:7,0:7:15.03:0,15,170	0/0:11,0:11:30.04:0,30,328	1/1:1,20:21:42.01:487,42,0	0/0:5,0:5:15.02:0,15,168
chr10	106992863	.	TGCACCGTCCTGCTCACCCC	T	4687.03	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.858;DP=424;FS=15.886;HRun=0;HaplotypeScore=207.9690;InbreedingCoeff=0.9098;MQ=90.02;MQ0=0;MQRankSum=-7.486;QD=66.96;ReadPosRankSum=0.296;VQSLOD=3.3460;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,7876	1/1:0,2:2:3.01:149,3,0	0/0:13,0:13:33.11:0,33,1518	0/0:23,0:23:61.41:0,61,2210	0/0:16,0:16:48.16:0,48,4017	0/0:11,0:11:33.11:0,33,2813	0/0:17,0:17:45.15:0,45,3068	1/1:7,9:16:27.08:1012,27,0	0/0:24,0:24:63.22:0,63,4219	0/0:17,0:17:51.18:0,51,3550	0/0:8,0:8:24.08:0,24,2050	0/0:18,0:18:54.19:0,54,3904	0/0:28,0:28:78.27:0,78,5731	0/0:23,0:23:63.22:0,63,5096	0/0:20,0:20:57.17:0,57,3765	0/0:9,0:9:27.09:0,27,1939	0/0:19,0:19:57.20:0,57,4678	0/0:19,0:19:57.16:0,57,4465	1/1:2,5:7:15.04:673,15,0	1/1:2,1:3:3.01:162,3,0	1/1:8,20:28:24.02:1074,24,0	0/0:6,0:6:18.06:0,18,901	0/0:5,0:5:12.04:0,12,902	0/0:16,0:16:48.16:0,48,3928	0/0:8,0:8:24.08:0,24,2033	0/0:14,0:14:39.13:0,39,3058	1/1:3,11:14:30.10:1618,30,0	0/0:5,0:5:15.05:0,15,855
chr10	106993588	.	TGAACTACAC	T	376.83	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.603;DP=745;FS=0.000;HRun=0;HaplotypeScore=198.5859;InbreedingCoeff=0.9840;MQ=76.17;MQ0=0;MQRankSum=-3.763;QD=62.80;ReadPosRankSum=1.748;VQSLOD=3.2200;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,148,6842	1/1:0,6:6:15.05:465,15,0	0/0:19,0:17:45.15:0,45,1756	0/0:24,0:24:63.21:0,63,2594	0/0:32,0:32:93.31:0,93,4272	0/0:34,0:34:99:0,99,4636	0/0:24,0:24:72.25:0,72,3472	0/0:25,0:25:75.26:0,75,3573	0/0:33,0:33:99:0,99,4814	0/0:39,0:39:99:0,111,5342	0/0:19,0:19:54.19:0,54,2473	0/0:25,0:25:75.26:0,75,3523	0/0:24,0:24:72.25:0,72,3368	0/0:24,0:24:69.24:0,69,3310	0/0:23,0:23:66.23:0,66,3165	0/0:25,0:25:75.26:0,75,3633	0/0:27,0:27:81.28:0,81,3904	0/0:23,0:23:63.22:0,63,2989	0/0:32,0:32:96.32:0,96,4308	0/0:26,0:26:78.27:0,78,3733	0/0:33,0:33:93.11:0,93,4322	0/0:22,0:22:66.23:0,66,3139	0/0:24,0:24:69.22:0,69,3236	0/0:20,0:20:60.21:0,60,2898	0/0:16,0:16:48.16:0,48,2279	0/0:31,0:31:87.30:0,87,4172	0/0:35,0:35:99:0,102,4245	0/0:29,0:29:87.30:0,87,4207
chr10	106993774	.	G	GCAAA	4492.88	PASS	AB=0.964;AC=13;AF=0.232;AN=56;BaseQRankSum=9.945;DP=767;FS=0.000;HRun=0;HaplotypeScore=145.1770;InbreedingCoeff=0.9133;MQ=60.61;MQ0=2;MQRankSum=-9.668;QD=21.50;ReadPosRankSum=-5.858;VQSLOD=3.2245;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,99,1560	0/0:8,0:8:18.06:0,18,287	0/0:36,0:26:15.30:0,15,219	0/0:30,0:26:29.56:0,30,373	0/0:35,0:35:72.25:0,72,1154	0/0:26,0:26:51.17:0,51,797	0/0:25,0:25:39.13:0,39,625	1/1:45,0:44:53.70:597,54,0	0/0:30,0:32:78.23:0,78,1163	0/0:31,0:31:44.72:0,45,626	0/0:28,0:28:60.18:0,60,921	1/1:9,14:23:33.11:795,33,0	0/0:16,0:18:36.09:0,36,492	0/1:26,1:27:6.06:6,0,917	0/0:22,0:22:51.15:0,51,794	0/0:11,0:11:21.07:0,21,338	0/0:26,0:26:57.19:0,57,910	0/0:31,0:31:75.23:0,75,1177	1/1:26,0:26:41.55:592,42,0	1/1:35,0:35:87.01:1192,87,0	1/1:22,0:22:26.96:282,27,0	0/0:27,0:27:57.19:0,57,892	0/0:16,0:16:45.15:0,45,699	0/0:39,0:39:42.80:0,43,1151	0/0:21,0:21:36.11:0,36,555	0/0:33,0:33:72.22:0,72,1117	1/1:30,0:30:74.87:1029,75,0	0/0:14,0:15:30.10:0,30,463
chr10	106993802	.	A	AC	664.24	PASS	AB=0.906;AC=6;AF=0.107;AN=56;BaseQRankSum=11.380;DP=762;FS=6.573;HRun=0;HaplotypeScore=105.4893;InbreedingCoeff=-0.1170;MQ=69.43;MQ0=4;MQRankSum=-6.103;QD=3.63;ReadPosRankSum=-0.646;VQSLOD=2.7200;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,1853	0/0:7,0:7:21.07:0,21,294	0/0:30,0:25:56.42:0,56,711	0/0:30,0:24:55.30:0,55,662	0/0:30,0:30:90.30:0,90,1255	0/0:26,0:26:78.24:0,78,1059	0/0:31,0:31:90.28:0,90,1226	0/1:35,0:34:92.46:92,0,206	0/0:32,0:32:96.23:0,96,1267	0/0:23,0:23:65.78:0,66,835	0/0:30,0:30:90.28:0,90,1225	0/1:18,0:18:7.77:8,0,110	0/0:19,0:19:57.10:0,57,721	0/0:28,0:28:79.37:0,79,1129	0/0:23,0:23:69.21:0,69,946	0/0:15,0:15:45.15:0,45,629	0/0:33,0:33:90.25:0,90,1219	0/0:32,0:32:96.29:0,96,1320	0/1:30,4:34:99:104,0,257	0/1:25,13:38:99:277,0,191	0/1:22,2:24:70.82:71,0,195	0/0:26,0:26:75.24:0,75,1033	0/0:21,0:21:63.19:0,63,836	0/0:35,0:35:99:0,103,1389	0/0:18,0:17:51.16:0,51,697	0/0:30,0:30:90.03:0,90,1213	0/1:29,5:34:99:234,0,183	0/0:13,0:13:39.13:0,39,545
chr10	106993803	.	A	AAACAAACAAAC	6399.55	PASS	AB=0.888;AC=5;AF=0.089;AN=56;BaseQRankSum=8.366;DP=759;FS=1.840;HRun=0;HaplotypeScore=249.8315;InbreedingCoeff=-0.0983;MQ=70.06;MQ0=4;MQRankSum=-7.922;QD=38.32;ReadPosRankSum=-4.905;VQSLOD=3.6503;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,3870	0/0:7,0:7:21.06:0,21,592	0/0:29,0:26:22.47:0,22,754	0/0:29,0:23:50.11:0,50,811	0/0:30,0:30:90.30:0,90,2645	0/0:25,0:25:75.22:0,75,2054	0/0:31,0:31:93.26:0,93,2336	0/1:35,0:34:99:1019,0,112	0/0:31,0:31:90.29:0,90,2707	0/0:22,0:22:60.17:0,60,1572	0/0:29,0:29:84.26:0,84,2318	0/0:17,0:17:45.08:0,45,496	0/0:19,0:19:51.03:0,51,1234	0/0:28,0:28:84.26:0,84,2420	0/0:23,0:23:66.21:0,66,1923	0/0:16,0:16:45.15:0,45,1316	0/0:34,0:34:96.21:0,96,2457	0/0:31,0:31:93.26:0,93,2905	0/1:31,4:35:99:828,0,204	0/1:24,12:37:99:2168,0,169	0/1:24,2:26:99:531,0,141	0/0:26,0:26:75.21:0,75,2064	0/0:21,0:21:60.19:0,60,1762	0/0:36,0:36:99:0,102,2891	0/0:17,0:16:48.13:0,48,1378	0/0:30,0:30:90.28:0,90,2728	0/1:29,5:34:99:1853,0,180	0/0:13,0:13:39.13:0,39,1248
chr10	106994652	.	TGTAA	T	314.70	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.813;DP=882;FS=3.989;HRun=0;HaplotypeScore=179.9401;InbreedingCoeff=0.9958;MQ=58.36;MQ0=3;MQRankSum=-0.816;QD=28.61;ReadPosRankSum=0.442;VQSLOD=3.5421;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:56:99:0,145,3439	1/1:1,10:11:21.07:407,21,0	0/0:60,0:42:99:0,101,2371	0/0:57,0:48:99:0,102,2566	0/0:18,0:18:38.97:0,39,770	0/0:24,0:24:72.17:0,72,1733	0/0:39,0:39:99:0,111,2772	0/0:39,0:39:99:0,111,2767	0/0:34,0:34:90.24:0,90,2254	0/0:30,0:30:90.29:0,90,2256	0/0:16,0:16:42.14:0,42,953	0/0:30,0:30:83.99:0,84,1822	0/0:23,0:23:66.18:0,66,1699	0/0:25,0:25:75.21:0,75,1944	0/0:29,0:29:87.20:0,87,2026	0/0:30,0:30:87.30:0,87,2335	0/0:34,0:34:94.20:0,94,2373	0/0:20,0:20:54.18:0,54,1434	0/0:18,0:18:48.16:0,48,1212	0/0:16,0:16:43.07:0,43,917	0/0:83,0:83:99:0,236,5986	0/0:25,0:25:62.91:0,63,1176	0/0:22,0:22:53.97:0,54,1072	0/0:53,0:53:99:0,132,3254	0/0:17,0:17:38.94:0,39,1037	0/0:35,0:35:54.50:0,54,2605	0/0:20,0:20:57.15:0,57,1407	0/0:16,0:16:48.16:0,48,1289
chr10	106994764	.	ATGTG	A	96.75	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.955;DP=778;FS=6.209;HRun=0;HaplotypeScore=192.0310;InbreedingCoeff=0.9674;MQ=58.44;MQ0=3;MQRankSum=-4.490;QD=19.35;ReadPosRankSum=-2.046;VQSLOD=2.3843;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,102,2682	1/1:0,5:5:12:183,12,0	0/0:24,0:19:50.85:0,51,1138	0/0:39,0:33:54.09:0,54,1257	0/0:14,0:14:39.13:0,39,1029	0/0:24,0:24:56.44:0,56,1332	0/0:31,0:31:90.31:0,90,2292	0/0:37,0:37:96.32:0,96,2164	0/0:31,0:31:51.22:0,51,1723	0/0:38,0:38:99:0,102,2603	0/0:14,0:14:42.14:0,42,1095	0/0:21,0:21:45.15:0,45,1034	0/0:23,0:23:54.18:0,54,1340	0/0:24,0:24:57.13:0,57,1451	0/0:37,0:37:81.23:0,81,2074	0/0:26,0:26:54.18:0,54,1346	0/0:30,0:30:87.14:0,87,2130	0/0:23,0:23:63.22:0,63,1543	0/0:19,0:19:54.14:0,54,1300	0/0:20,0:20:42.14:0,42,1093	0/0:84,0:84:99:0,189,4640	0/0:21,0:21:60.21:0,60,1501	0/0:14,0:14:36.12:0,36,926	0/0:49,0:48:92.37:0,92,2315	0/0:15,0:15:42.14:0,42,1108	0/0:39,0:39:99:0,108,2792	0/0:14,0:14:30.10:0,30,784	0/0:12,0:12:36.12:0,36,823
chr10	106995109	.	TGCGCGCGCGC	T	507.85	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=3.212;DP=403;FS=6.152;HRun=0;HaplotypeScore=116.4219;InbreedingCoeff=0.6552;MQ=56.63;MQ0=14;MQRankSum=-1.065;QD=7.05;ReadPosRankSum=-0.663;VQSLOD=1.5464;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:48.64:0,49,1561	0/0:3,0:3:2.88:0,3,15	0/0:11,0:11:3:0,3,26	0/1:12,0:7:0.14:0,0,0	0/0:14,0:13:30.10:0,30,1035	0/0:14,0:13:24.03:0,24,844	0/0:22,0:21:33.08:0,33,1198	1/1:6,6:11:15.05:431,15,0	0/0:15,0:15:18.06:0,18,748	0/0:11,0:11:27.09:0,27,988	0/0:9,0:9:21.07:0,21,739	0/0:12,0:12:18.06:0,18,335	0/0:12,0:12:15.05:0,15,473	0/0:14,0:14:18.06:0,18,594	0/0:12,0:11:9.03:0,9,282	0/0:7,0:7:9.03:0,9,347	0/0:23,0:23:63.21:0,63,2486	0/0:26,0:26:66.14:0,66,2512	1/1:6,0:5:3.01:96,3,0	./.	1/1:38,0:34:2.64:96,3,0	0/0:12,0:11:21.06:0,21,708	0/0:10,0:9:18.06:0,18,534	0/0:28,0:28:69.19:0,69,3000	0/0:10,0:10:21.07:0,21,787	0/0:17,0:17:36.12:0,36,1365	1/1:0,4:4:0.47:1,0,0	0/0:11,0:7:12.04:0,12,352
chr10	106995114	.	GCGCGCGCGCGCACA	G	529.89	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=3.542;DP=402;FS=3.270;HRun=0;HaplotypeScore=134.7728;InbreedingCoeff=0.6826;MQ=51.32;MQ0=21;MQRankSum=-0.751;QD=7.79;ReadPosRankSum=-0.685;VQSLOD=2.6329;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:54.66:0,55,1975	0/0:3,0:3:2.88:0,3,15	0/0:4,0:4:3:0,3,26	0/1:9,0:4:0:0,0,0	0/0:15,0:13:30.10:0,30,1159	0/0:16,0:15:27.04:0,27,1174	0/0:23,0:22:36.09:0,36,1547	1/1:10,0:9:15.05:431,15,0	0/0:19,0:18:27.09:0,27,1287	0/0:12,0:11:27.09:0,27,1044	0/0:10,0:9:21.07:0,21,818	0/0:11,0:11:18.06:0,18,335	0/0:9,0:9:15.05:0,15,563	0/0:15,0:15:24.08:0,24,1028	0/0:10,0:9:9.03:0,9,305	0/0:6,0:6:9.03:0,9,409	0/0:27,0:27:76.81:0,77,3511	0/0:28,0:27:79.07:0,79,3529	1/1:2,0:1:3.01:96,3,0	./.	1/1:11,32:37:5.95:120,6,0	0/0:11,0:10:21.06:0,21,772	0/0:8,0:7:18.06:0,18,550	0/0:33,0:33:81.23:0,81,4250	0/0:12,0:11:23.82:0,24,938	0/0:18,0:17:38.83:0,39,1457	1/1:4,0:4:0.14:1,0,0	0/0:10,0:6:12.04:0,12,352
chr10	106995303	.	AGAGG	A	229.57	PASS	AB=1.000;AC=5;AF=0.100;AN=50;BaseQRankSum=2.722;DP=311;FS=16.234;HRun=0;HaplotypeScore=62.8816;InbreedingCoeff=0.4325;MQ=71.68;MQ0=6;MQRankSum=-1.779;QD=6.56;ReadPosRankSum=0.261;VQSLOD=0.5366;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:15.88:0,16,180	0/0:6,0:6:11.62:0,12,71	0/0:34,0:17:27.23:0,27,381	0/0:35,0:21:25.68:0,26,427	0/0:9,0:9:11.65:0,12,74	0/0:5,0:5:6.42:0,6,62	0/0:18,0:18:33.02:0,33,369	0/1:18,0:16:20.64:21,0,170	0/0:10,0:10:14.91:0,15,139	0/0:9,0:9:15.02:0,15,143	0/0:4,0:4:0:0,0,0	1/1:6,4:10:20.28:309,20,0	0/0:6,0:6:8.99:0,9,123	0/0:9,0:9:11.98:0,12,149	0/0:12,0:12:12.04:0,12,211	0/0:8,0:8:6.47:0,6,68	0/0:11,0:11:13.16:0,13,92	0/0:17,0:16:24.01:0,24,345	0/0:7,0:7:17.05:0,17,121	./.	1/1:7,0:7:0.45:1,0,0	./.	0/0:7,0:7:4.69:0,5,20	0/0:12,0:12:14.72:0,15,175	./.	0/0:9,0:9:2.99:0,3,24	0/0:10,0:10:14.82:0,15,101	0/0:5,0:5:11.19:0,11,78
chr10	106995800	.	CA	C	283.45	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.082;DP=614;FS=2.850;HRun=1;HaplotypeScore=61.1335;InbreedingCoeff=0.9974;MQ=80.63;MQ0=0;MQRankSum=-0.263;QD=31.49;ReadPosRankSum=0.716;VQSLOD=3.3394;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,157,2485	1/1:0,9:9:27.09:377,27,0	0/0:15,0:15:37.93:0,38,546	0/0:18,0:18:33.81:0,34,391	0/0:18,0:18:54.14:0,54,805	0/0:17,0:17:51.16:0,51,776	0/0:29,0:29:87.28:0,87,1340	0/0:17,0:17:48.16:0,48,760	0/0:22,0:22:66.21:0,66,1024	0/0:16,0:16:48.16:0,48,768	0/0:13,0:13:36.12:0,36,575	0/0:20,0:20:60.20:0,60,959	0/0:21,0:21:63.21:0,63,1007	0/0:17,0:17:48.16:0,48,767	0/0:15,0:15:45.15:0,45,714	0/0:20,0:20:60.20:0,60,954	0/0:34,0:34:99:0,102,1621	0/0:23,0:23:69.23:0,69,1093	0/0:31,0:31:93.31:0,93,1458	0/0:14,0:14:42.14:0,42,666	0/0:55,0:55:99:0,166,2619	0/0:15,0:15:45.15:0,45,717	0/0:9,0:9:27.09:0,27,430	0/0:37,0:37:99:0,111,1688	0/0:17,0:17:51.17:0,51,801	0/0:22,0:22:63.18:0,63,958	0/0:21,0:21:63.20:0,63,979	0/0:16,0:16:48.16:0,48,748
chr10	106996196	.	A	ATCTCAAAGCCTTTG	12956.94	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=2.022;DP=614;FS=2.533;HRun=0;HaplotypeScore=233.7489;InbreedingCoeff=0.9948;MQ=85.34;MQ0=0;MQRankSum=-12.286;QD=123.40;ReadPosRankSum=-4.172;VQSLOD=4.1484;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,126,4851	1/1:7,0:7:18.06:753,18,0	0/0:22,0:22:63.20:0,63,2194	0/0:22,0:22:57.15:0,57,1908	0/0:14,0:14:39.13:0,39,1596	0/0:18,0:18:48.16:0,48,2003	0/0:32,0:32:93.30:0,93,3617	1/1:18,2:23:63.16:3114,63,0	0/0:27,0:27:72.18:0,72,2427	0/0:17,0:17:48.16:0,48,1947	0/0:6,0:6:15.05:0,15,512	0/0:28,0:28:81.28:0,81,3169	0/0:29,0:29:81.28:0,81,3275	0/0:28,0:28:84.29:0,84,3303	0/0:28,0:28:84.27:0,84,3231	0/0:18,0:18:54.19:0,54,2168	0/0:25,0:25:72.23:0,72,2760	0/0:36,0:36:96.26:0,96,3569	1/1:21,2:27:69.19:3243,69,0	1/1:9,2:12:30.06:1465,30,0	1/1:12,9:21:44.76:2121,45,0	0/0:16,0:16:48.15:0,48,1528	0/0:13,0:13:39.13:0,39,1493	0/0:36,0:36:96.33:0,96,3676	0/0:13,0:13:39.13:0,39,1543	0/0:26,0:26:72.25:0,72,2821	1/1:6,7:15:36.12:2260,36,0	0/0:9,0:9:27.09:0,27,1084
chr10	106996612	.	T	TC	4926.91	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.720;DP=662;FS=17.834;HRun=2;HaplotypeScore=76.9887;InbreedingCoeff=0.9949;MQ=85.36;MQ0=0;MQRankSum=-1.522;QD=36.77;ReadPosRankSum=-2.086;VQSLOD=2.6487;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:64:99:0,169,2068	1/1:0,8:9:27.09:387,27,0	0/0:25,0:25:66.17:0,66,787	0/0:23,0:23:51.13:0,51,614	0/0:18,0:18:51.13:0,51,607	0/0:12,0:12:36.10:0,36,432	0/0:26,0:26:75.24:0,75,929	1/1:4,22:26:66.19:908,66,0	0/0:24,0:24:66.21:0,66,814	0/0:33,0:33:87.26:0,87,1058	0/0:16,0:16:45.13:0,45,545	0/0:38,0:38:99:0,108,1326	0/0:19,0:19:57.18:0,57,706	0/0:28,0:28:78.24:0,78,967	0/0:19,0:19:54.17:0,54,670	0/0:24,0:24:72.19:0,72,856	0/0:36,0:36:99:0,105,1272	0/0:15,0:15:42.13:0,42,521	1/1:3,21:24:63.18:868,63,0	1/1:0,16:16:48.16:691,48,0	1/1:2,31:33:81.27:1166,81,0	0/0:21,0:21:60.18:0,60,732	0/0:6,0:6:18.06:0,18,223	0/0:29,0:29:81.25:0,81,1004	0/0:15,0:15:42.11:0,42,506	0/0:32,0:32:93.29:0,93,1153	1/1:3,23:26:63.21:907,63,0	0/0:5,0:5:15.05:0,15,186
chr10	106997085	.	T	TAA	850.22	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.741;DP=714;FS=2.960;HRun=0;HaplotypeScore=97.7873;InbreedingCoeff=0.9708;MQ=56.66;MQ0=15;MQRankSum=-0.678;QD=34.01;ReadPosRankSum=1.014;VQSLOD=6.0478;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1697	0/0:8,0:8:21.07:0,21,336	0/0:36,0:6:15.02:0,15,244	0/0:58,0:15:17.51:0,18,386	0/0:16,0:16:48.16:0,48,778	0/0:15,0:14:42.14:0,42,682	0/0:34,0:34:96.28:0,96,1479	0/0:25,0:24:68.27:0,68,1007	0/0:18,0:18:54.18:0,54,870	0/0:32,0:31:90.26:0,90,1384	0/0:12,0:12:30.09:0,30,457	1/1:5,19:25:43.80:945,44,0	0/0:15,0:15:45.12:0,45,702	0/0:20,0:20:60.20:0,60,979	0/0:15,0:15:45.15:0,45,732	0/0:12,0:12:36.12:0,36,581	0/0:37,0:37:99:0,104,1666	0/0:39,0:39:99:0,114,1810	0/0:14,0:12:36.04:0,36,526	0/0:11,0:11:33.09:0,33,509	0/0:62,0:60:99:0,128,2026	0/0:14,0:14:42.14:0,42,685	0/0:20,0:19:54.18:0,54,881	0/0:42,0:42:99:0,123,2002	0/0:18,0:18:51.17:0,51,829	0/0:26,0:25:75.26:0,75,1211	0/0:27,0:27:66.21:0,66,1045	0/0:24,0:24:68.91:0,69,1125
chr10	106997091	.	AGT	A	2672.79	PASS	AB=0.939;AC=17;AF=0.304;AN=56;BaseQRankSum=10.830;DP=718;FS=1.815;HRun=0;HaplotypeScore=83.1814;InbreedingCoeff=0.5565;MQ=54.92;MQ0=16;MQRankSum=0.639;QD=10.01;ReadPosRankSum=1.243;VQSLOD=3.5320;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,2:40:21.77:0,22,1214	0/0:7,0:7:15.04:0,15,209	0/0:44,0:8:7.43:0,7,115	0/0:56,0:15:19.70:0,20,207	0/1:17,0:17:15.15:15,0,551	0/1:14,1:14:2.64:3,0,442	0/0:33,0:34:36.65:0,37,1008	1/1:13,11:23:7.83:297,8,0	0/0:17,1:18:9.40:0,9,617	0/0:31,0:30:63.07:0,63,927	0/0:12,0:12:20.43:0,20,288	1/1:21,2:23:55.71:493,56,0	0/0:12,0:12:33.11:0,33,509	0/0:21,0:21:57.18:0,57,867	0/1:13,2:15:32.40:32,0,460	0/0:10,0:10:21.06:0,21,312	0/0:36,1:38:19.90:0,20,1177	0/1:33,3:36:19.86:20,0,1125	1/1:10,6:15:17.88:186,18,0	1/1:2,6:9:20.83:199,21,0	1/1:21,44:63:57.64:906,58,0	0/0:13,1:14:3.38:0,3,527	0/1:18,1:18:5.66:6,0,379	0/0:43,0:43:99:0,104,1613	0/0:20,0:20:15.41:0,15,711	0/0:26,0:25:57.18:0,57,856	1/1:4,21:27:62.86:705,63,0	0/0:24,0:24:48.10:0,48,729
chr10	106997713	.	ATT	A	302.36	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=2.411;DP=497;FS=4.895;HRun=12;HaplotypeScore=86.5237;InbreedingCoeff=0.7135;MQ=80.61;MQ0=3;MQRankSum=0.049;QD=8.89;ReadPosRankSum=0.511;VQSLOD=1.8891;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:36:99:0,99,1443	0/0:2,0:6:12.02:0,12,117	0/0:30,0:29:44.52:0,45,490	0/1:16,0:11:1.80:2,0,148	0/0:20,0:20:48.13:0,48,643	0/0:16,0:16:38.56:0,39,501	0/0:23,0:23:33.53:0,34,705	0/0:11,0:11:17.06:0,17,176	0/0:19,0:20:54.17:0,54,768	0/0:19,0:19:48.14:0,48,677	0/0:17,0:19:47.63:0,48,640	1/1:2,16:18:39.07:397,39,0	0/0:15,0:15:33.11:0,33,475	0/0:10,0:12:30.08:0,30,395	0/0:10,0:11:29.59:0,30,412	0/0:13,0:14:36.12:0,36,521	0/0:26,0:29:71.13:0,71,970	0/0:20,0:20:60.20:0,60,883	0/0:21,0:21:49.71:0,50,424	0/0:10,0:10:26.91:0,27,211	0/0:19,0:19:56.78:0,57,441	0/0:5,0:5:15.05:0,15,213	0/0:10,0:11:28.10:0,28,336	0/0:27,0:28:76.97:0,77,1067	0/0:13,0:14:42.12:0,42,572	0/0:21,0:23:53.64:0,54,728	0/0:21,0:21:44.83:0,45,349	0/0:5,0:5:15.05:0,15,209
chr10	106997722	.	T	TC	2849.55	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=7.216;DP=515;FS=4.714;HRun=0;HaplotypeScore=73.9136;InbreedingCoeff=0.9245;MQ=81.39;MQ0=3;MQRankSum=-0.159;QD=28.50;ReadPosRankSum=1.891;VQSLOD=3.8075;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:99:0,99,1361	0/1:7,0:7:2.18:2,0,57	0/0:36,0:29:65.05:0,65,590	0/0:19,0:14:17.85:0,18,207	0/0:17,0:17:48.13:0,48,620	0/0:15,0:15:45.02:0,45,531	0/0:23,0:22:65.69:0,66,782	1/1:0,14:14:42.07:480,42,0	0/0:20,0:20:52.84:0,53,703	0/0:19,0:19:54.62:0,55,695	0/0:17,0:17:46.64:0,47,590	0/0:18,0:18:44.01:0,44,269	0/0:13,0:13:36.10:0,36,463	0/0:11,0:11:27.59:0,28,338	0/0:11,0:11:30.05:0,30,395	0/0:13,0:13:32.39:0,32,458	0/0:30,0:30:87.01:0,87,1057	0/0:20,0:20:60.19:0,60,812	1/1:3,22:25:66.17:836,66,0	1/1:0,9:9:27.09:355,27,0	1/1:0,20:20:57.19:756,57,0	0/0:9,0:9:27.05:0,27,313	0/0:12,0:12:32.96:0,33,360	0/0:29,0:29:84.17:0,84,1062	0/0:16,0:16:41.38:0,41,525	0/0:21,0:21:57.11:0,57,720	1/1:0,25:25:45.15:596,45,0	0/0:8,0:8:24.02:0,24,253
chr10	106997830	.	G	GGA	108.10	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=5.035;DP=429;FS=3.950;HRun=0;HaplotypeScore=72.5387;InbreedingCoeff=0.4441;MQ=79.71;MQ0=0;MQRankSum=-0.749;QD=2.40;ReadPosRankSum=-0.551;VQSLOD=1.6452;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.13:0,63,819	1/1:0,7:7:11.95:144,12,0	0/0:14,0:13:18.05:0,18,246	0/0:12,0:12:15.79:0,16,185	0/0:12,0:12:27.30:0,27,317	0/0:19,0:19:54:0,54,577	0/0:32,0:31:93.26:0,93,1316	0/0:5,0:5:9.46:0,9,77	0/0:13,0:13:36.09:0,36,492	0/0:13,0:13:36.03:0,36,412	0/0:9,0:9:27.05:0,27,326	0/0:14,0:14:31.19:0,31,257	0/0:13,0:13:39:0,39,462	0/0:17,0:17:48.06:0,48,606	0/0:12,0:12:30.07:0,30,381	0/0:13,0:13:33.08:0,33,445	0/0:24,0:24:69.09:0,69,826	0/0:18,0:18:51.07:0,51,670	0/1:16,0:16:22.20:22,0,106	1/1:3,0:3:0.89:2,1,0	0/0:29,0:29:12.22:0,12,274	0/0:9,0:9:24.02:0,24,254	0/0:11,0:11:30.08:0,30,415	0/0:39,0:39:99:0,111,1495	0/0:12,0:12:30.06:0,30,377	0/0:18,0:18:42.06:0,42,501	0/1:19,0:18:51.63:52,0,65	0/0:4,0:4:9.01:0,9,97
chr10	106997997	.	C	CTGA	269.56	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.850;DP=517;FS=1.407;HRun=0;HaplotypeScore=97.9416;InbreedingCoeff=0.9371;MQ=83.55;MQ0=0;MQRankSum=-4.761;QD=38.51;ReadPosRankSum=-0.094;VQSLOD=4.3758;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:81.28:0,81,1506	0/0:9,0:9:24.08:0,24,448	0/0:14,0:14:42.13:0,42,749	0/0:17,0:17:44.50:0,45,735	0/0:21,0:21:57.20:0,57,1061	0/0:15,0:15:45.15:0,45,839	0/0:32,0:32:96.33:0,96,1789	0/0:15,0:15:45.15:0,45,791	0/0:14,0:14:42.14:0,42,775	0/0:11,0:11:33.11:0,33,614	0/0:12,0:12:30.10:0,30,559	1/1:0,7:7:21.07:362,21,0	0/0:9,0:9:27.09:0,27,491	0/0:17,0:17:51.17:0,51,951	0/0:16,0:16:45.15:0,45,833	0/0:18,0:18:54.18:0,54,978	0/0:37,0:37:99:0,111,1978	0/0:33,0:33:96.29:0,96,1754	0/0:20,0:20:60.18:0,60,1057	0/0:10,0:10:30.10:0,30,559	0/0:48,0:48:99:0,122,2223	0/0:12,0:12:36.11:0,36,632	0/0:15,0:15:39.13:0,39,694	0/0:29,0:29:81.26:0,81,1461	0/0:19,0:19:51.17:0,51,917	0/0:20,0:20:57.20:0,57,1063	0/0:16,0:16:48.16:0,48,894	0/0:3,0:3:9.03:0,9,168
chr10	106997998	.	C	CT	87.78	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.076;DP=517;FS=0.000;HRun=0;HaplotypeScore=77.1085;InbreedingCoeff=0.9371;MQ=83.56;MQ0=0;MQRankSum=-3.985;QD=12.54;ReadPosRankSum=-0.126;VQSLOD=4.2251;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:81.26:0,81,1109	0/0:9,0:9:24.08:0,24,336	0/0:13,0:13:39.10:0,39,508	0/0:17,0:17:37.51:0,38,518	0/0:21,0:21:60.18:0,60,817	0/0:17,0:17:45.15:0,45,629	0/0:32,0:32:96.32:0,96,1342	0/0:14,0:14:42.10:0,42,551	0/0:14,0:14:42.13:0,42,569	0/0:11,0:11:33.10:0,33,447	0/0:13,0:13:33.10:0,33,444	1/1:0,7:7:20.99:180,21,0	0/0:9,0:9:26.98:0,27,318	0/0:17,0:17:51.16:0,51,697	0/0:16,0:16:48.14:0,48,639	0/0:17,0:17:51.17:0,51,713	0/0:36,0:36:99:0,108,1416	0/0:33,0:33:93.29:0,93,1282	0/0:20,0:20:60.11:0,60,748	0/0:10,0:10:30.09:0,30,403	0/0:47,0:47:99:0,126,1706	0/0:12,0:12:36.10:0,36,478	0/0:15,0:15:39.12:0,39,524	0/0:29,0:29:81.22:0,81,1079	0/0:20,0:20:51.14:0,51,678	0/0:21,0:21:60.19:0,60,822	0/0:16,0:16:48.16:0,48,667	0/0:3,0:3:9.03:0,9,126
chr10	106998010	.	C	CTA	107.28	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.134;DP=507;FS=0.000;HRun=0;HaplotypeScore=86.0907;InbreedingCoeff=0.9550;MQ=74.71;MQ0=0;MQRankSum=-5.034;QD=11.92;ReadPosRankSum=0.601;VQSLOD=3.1484;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.24:0,81,1264	0/0:12,0:12:33.08:0,33,510	0/0:6,0:6:18.05:0,18,269	0/0:12,0:12:30.07:0,30,426	0/0:23,0:23:66.23:0,66,1076	0/0:18,0:18:54.18:0,54,881	0/0:37,0:37:99:0,111,1785	0/0:14,0:14:39.13:0,39,613	0/0:13,0:13:36.11:0,36,560	0/0:11,0:11:30.10:0,30,487	0/0:12,0:12:33.08:0,33,487	1/1:2,7:9:23.95:201,24,0	0/0:8,0:8:21.07:0,21,343	0/0:18,0:18:54.18:0,54,881	0/0:14,0:14:42.14:0,42,685	0/0:17,0:17:51.16:0,51,808	0/0:29,0:29:87.30:0,87,1419	0/0:32,0:32:96.30:0,96,1535	0/0:18,0:18:54.14:0,54,828	0/0:12,0:12:36.09:0,36,530	0/0:44,0:44:99:0,114,1804	0/0:11,0:11:33.11:0,33,538	0/0:14,0:14:42.14:0,42,683	0/0:29,0:29:84.27:0,84,1332	0/0:19,0:19:51.17:0,51,823	0/0:22,0:22:63.21:0,63,1025	0/0:22,0:22:66.21:0,66,1043	0/0:4,0:4:12.04:0,12,196
chr10	106998018	.	G	GA	4052.07	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-1.803;DP=501;FS=2.507;HRun=0;HaplotypeScore=57.8175;InbreedingCoeff=0.9829;MQ=76.74;MQ0=0;MQRankSum=-0.687;QD=40.52;ReadPosRankSum=-1.268;VQSLOD=3.6099;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.19:0,75,966	0/0:12,0:12:33.11:0,33,455	0/0:5,0:5:11.98:0,12,131	0/0:14,0:15:19.29:0,19,285	0/0:21,0:21:63.21:0,63,851	0/0:18,0:18:51.17:0,51,707	0/0:37,0:37:99:0,111,1491	1/1:1,11:12:32.29:426,32,0	0/0:13,0:13:33.09:0,33,436	0/0:13,0:13:39.07:0,39,487	0/0:10,0:10:27.07:0,27,358	0/0:10,0:10:30.08:0,30,390	0/0:8,0:8:24.07:0,24,313	0/0:21,0:21:63.18:0,63,832	0/0:14,0:14:42.14:0,42,585	0/0:17,0:17:51.15:0,51,681	0/0:29,0:29:84.23:0,84,1134	0/0:34,0:34:99:0,99,1318	1/1:0,15:15:45.14:678,45,0	1/1:0,9:9:27.09:422,27,0	1/1:1,42:43:99:1542,99,0	0/0:11,0:11:30.06:0,30,388	0/0:14,0:14:42.07:0,42,553	0/0:28,0:28:84.27:0,84,1152	0/0:19,0:19:54.15:0,54,718	0/0:22,0:22:66.14:0,66,849	1/1:0,21:21:63.21:984,63,0	0/0:4,0:4:12.04:0,12,167
chr10	106998140	.	C	CCCCAGTGCAG	4220.26	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=0.988;DP=521;FS=6.581;HRun=0;HaplotypeScore=162.4250;InbreedingCoeff=0.8698;MQ=86.22;MQ0=0;MQRankSum=-7.391;QD=38.72;ReadPosRankSum=-3.121;VQSLOD=3.7174;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:75.26:0,75,2072	1/1:7,3:10:12.04:545,12,0	0/0:19,0:21:11.46:0,11,364	0/0:20,0:20:0.18:0,0,107	0/0:14,0:14:30.10:0,30,762	0/0:22,0:21:51.16:0,51,1333	0/0:24,0:24:54.16:0,54,1385	1/1:11,0:11:6.02:255,6,0	0/0:15,0:15:30.10:0,30,853	0/0:24,0:24:57.19:0,57,1605	0/0:7,0:7:15.04:0,15,377	1/1:6,9:15:27.09:1351,27,0	0/0:16,0:16:30.10:0,30,824	0/0:16,0:16:39.12:0,39,1109	0/0:16,0:16:39.13:0,39,1076	0/0:12,0:12:27.09:0,27,776	0/0:29,0:29:69.24:0,69,2083	0/0:22,0:22:48.13:0,48,1330	1/1:15,1:17:21.06:516,21,0	1/1:7,3:10:9.03:336,9,0	1/1:20,5:27:6.02:200,6,0	0/0:16,0:16:39.12:0,39,1025	0/0:16,0:16:33.11:0,33,977	0/0:40,0:40:99:0,102,2936	0/0:16,0:16:36.11:0,36,953	0/0:25,0:25:48.16:0,48,1346	1/1:13,3:19:20.86:1017,21,0	0/0:3,0:3:6.02:0,6,127
chr10	107000316	.	TG	T	1376.30	PASS	AB=0.911;AC=22;AF=0.407;AN=54;BaseQRankSum=8.382;DP=284;FS=0.595;HRun=11;HaplotypeScore=54.7133;InbreedingCoeff=0.3604;MQ=64.66;MQ0=0;MQRankSum=-0.678;QD=7.78;ReadPosRankSum=3.939;VQSLOD=1.6748;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:18.02:0,18,192	1/1:2,0:7:8.14:24,8,0	0/0:7,0:4:2.96:0,3,19	0/1:4,0:4:11.04:16,0,11	0/0:9,0:9:9.02:0,9,96	0/1:21,0:21:0.72:1,0,155	0/1:16,3:19:25.72:26,0,341	1/1:4,7:10:14.93:120,15,0	./.	0/0:7,0:7:12.01:0,12,119	0/0:7,0:7:9.02:0,9,96	1/1:3,3:6:11.98:98,12,0	0/0:10,0:10:18.02:0,18,178	0/1:9,0:9:0.41:0,0,160	0/1:7,1:8:10.12:10,0,77	0/0:5,0:5:12.03:0,12,128	0/0:10,0:12:8.64:0,9,48	0/1:13,0:13:6.11:6,0,142	1/1:2,4:5:8.99:74,9,0	1/1:2,12:14:35.96:295,36,0	1/1:9,24:33:71.90:591,72,0	0/1:1,1:2:13.71:19,0,14	0/0:8,0:8:12.01:0,12,114	0/1:11,2:13:28.24:28,0,132	0/0:6,0:6:0:0,0,0	0/0:11,0:10:9.02:0,9,96	1/1:0,10:10:29.96:246,30,0	0/0:4,0:4:9.02:0,9,96
chr10	107000433	.	A	AG	430.11	PASS	AB=0.932;AC=7;AF=0.125;AN=56;BaseQRankSum=6.955;DP=456;FS=12.328;HRun=0;HaplotypeScore=80.8841;InbreedingCoeff=0.3949;MQ=48.37;MQ0=22;MQRankSum=-6.717;QD=4.78;ReadPosRankSum=0.715;VQSLOD=2.1451;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:62.29:0,62,576	0/0:4,0:3:9:0,9,80	0/0:44,0:10:18.86:0,19,142	0/0:28,0:6:14.43:0,14,111	0/0:21,0:19:45.55:0,46,438	0/0:17,0:16:36.06:0,36,391	0/0:17,0:17:44.90:0,45,438	0/1:22,3:17:53.01:112,0,53	0/0:8,0:7:21.04:0,21,237	0/0:13,0:10:26.29:0,26,254	0/0:18,0:18:43.58:0,44,429	0/0:9,0:8:17.06:0,17,124	0/0:8,0:7:14.76:0,15,133	0/0:11,0:11:22.82:0,23,219	0/0:9,0:9:20.52:0,21,234	0/0:9,0:9:23.95:0,24,223	0/0:14,0:14:41.91:0,42,409	0/0:19,0:18:47.99:0,48,514	1/1:13,3:14:37.75:247,38,0	0/1:18,1:11:27.25:54,0,27	1/1:10,0:10:1.86:65,2,0	0/0:9,0:9:24.06:0,24,294	0/0:16,0:12:26.99:0,27,270	0/0:13,0:13:33.63:0,34,338	0/0:14,0:14:31.54:0,32,290	0/0:23,0:22:49.63:0,50,485	0/1:19,1:20:85.64:86,0,91	0/0:16,0:14:37.64:0,38,443
chr10	107000447	.	AAG	A	1339.58	PASS	AB=0.988;AC=15;AF=0.268;AN=56;BaseQRankSum=5.833;DP=439;FS=58.322;HRun=0;HaplotypeScore=75.6328;InbreedingCoeff=0.5701;MQ=56.01;MQ0=18;MQRankSum=-5.728;QD=9.85;ReadPosRankSum=-1.728;VQSLOD=1.0264;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:24.63:0,25,577	0/0:4,0:3:6.75:0,7,41	0/0:36,0:9:19.29:0,19,152	0/0:31,0:9:15.33:0,15,112	0/0:24,0:22:30.64:0,31,452	0/0:13,0:13:27.77:0,28,334	0/0:15,0:15:32.58:0,33,346	1/1:6,8:9:17.88:152,18,0	0/0:8,0:7:15.73:0,16,145	0/1:11,0:8:0.37:0,0,83	0/0:14,0:14:1.43:0,1,152	0/1:9,0:8:3.54:4,0,92	0/0:9,0:8:17.13:0,17,115	0/0:13,0:13:17.82:0,18,159	0/0:9,0:9:11.88:0,12,248	0/1:8,0:8:0:0,0,85	0/0:16,0:16:17.44:0,17,399	0/0:20,0:19:30.70:0,31,374	1/1:6,14:18:53.38:482,53,0	1/1:10,6:10:23.78:238,24,0	1/1:4,6:10:21.70:184,22,0	0/0:8,0:8:7.63:0,8,187	0/1:15,0:12:16.37:16,0,149	0/0:15,0:15:41.21:0,41,393	0/1:14,1:15:19.74:20,0,251	0/0:20,0:19:31.66:0,32,447	1/1:11,7:18:48.28:417,48,0	0/0:19,0:18:50.78:0,51,522
chr10	107000448	.	AG	A	964.96	PASS	AB=0.986;AC=18;AF=0.321;AN=56;BaseQRankSum=5.152;DP=433;FS=99.509;HRun=1;HaplotypeScore=70.2646;InbreedingCoeff=0.3304;MQ=62.87;MQ0=18;MQRankSum=-4.203;QD=5.71;ReadPosRankSum=-2.220;VQSLOD=-0.5910;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:5.50:0,6,434	0/0:4,0:3:5.56:0,6,39	0/0:39,0:13:27.77:0,28,211	0/0:30,0:10:14.87:0,15,153	0/0:23,0:21:26.68:0,27,371	0/0:11,0:11:27.93:0,28,263	0/0:15,0:15:7.72:0,8,225	1/1:14,0:9:17.06:111,17,0	0/1:8,0:7:0.28:0,0,85	0/0:10,0:7:3.41:0,3,75	0/1:14,0:14:19.79:20,0,92	0/1:8,0:7:3.47:3,0,72	0/0:9,0:8:2.92:0,3,73	0/0:13,0:13:11.74:0,12,101	0/0:9,0:9:6.82:0,7,165	0/1:8,0:8:39.04:39,0,47	0/1:15,0:15:0.45:0,0,284	0/0:19,1:19:9.58:0,10,281	1/1:20,0:18:47.98:302,48,0	1/1:15,0:10:23.52:156,24,0	1/1:9,1:10:21.50:132,22,0	0/1:7,1:8:14.05:14,0,127	0/1:15,0:12:40.60:41,0,110	0/0:14,0:14:29.46:0,29,274	0/1:15,0:15:8.96:9,0,193	0/0:19,1:19:20.32:0,20,327	1/1:18,1:19:45.13:313,45,0	0/0:19,0:18:49.84:0,50,410
chr10	107000449	.	G	GA	1315.88	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=6.605;DP=432;FS=31.904;HRun=17;HaplotypeScore=74.0255;InbreedingCoeff=0.8274;MQ=63.37;MQ0=16;MQRankSum=-5.842;QD=14.95;ReadPosRankSum=-0.666;VQSLOD=1.9222;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:35.83:0,36,567	0/0:4,0:3:9:0,9,88	0/0:37,0:13:9.89:0,10,202	0/0:29,0:11:11.77:0,12,184	0/0:23,0:21:44.76:0,45,498	0/0:11,0:11:30.07:0,30,337	0/0:14,0:14:28.44:0,28,320	1/1:15,0:11:17.12:142,17,0	0/0:9,0:8:14.92:0,15,132	0/0:10,0:7:12.25:0,12,135	0/0:14,0:14:2.56:0,3,155	0/0:8,0:7:11.68:0,12,99	0/0:9,0:8:16.50:0,17,137	0/0:14,0:14:18.40:0,18,190	0/1:9,0:9:2.92:3,0,168	0/0:7,0:7:13.54:0,14,99	0/0:15,0:15:38.46:0,38,428	0/0:20,0:19:42.11:0,42,431	1/1:18,2:18:48.20:459,48,0	1/1:12,3:10:23.98:228,24,0	1/1:9,1:10:20.96:208,21,0	0/0:8,0:8:19.79:0,20,178	0/0:16,0:13:17.68:0,18,206	0/0:14,0:14:36.54:0,37,357	0/0:14,0:14:27.63:0,28,335	0/0:20,0:19:47.58:0,48,501	1/1:15,4:19:50.18:449,50,0	0/0:19,0:18:51.12:0,51,572
chr10	107000490	.	A	AC	542.46	PASS	AB=0.681;AC=2;AF=0.036;AN=56;BaseQRankSum=6.058;DP=469;FS=32.771;HRun=2;HaplotypeScore=73.0235;InbreedingCoeff=-0.0393;MQ=79.73;MQ0=0;MQRankSum=-6.585;QD=14.28;ReadPosRankSum=-1.193;VQSLOD=1.1865;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.23:0,72,891	0/1:6,5:11:99:182,0,190	0/0:21,0:21:54.12:0,54,635	0/0:23,0:23:62.96:0,63,750	0/0:18,0:18:51.16:0,51,630	0/0:21,0:21:63.20:0,63,781	0/0:20,0:20:54.15:0,54,656	0/0:25,0:23:66.21:0,66,818	0/0:5,0:5:15.05:0,15,186	0/0:14,0:14:39.12:0,39,483	0/0:7,0:7:21.06:0,21,256	0/0:6,0:6:15.05:0,15,186	0/0:7,0:7:21.07:0,21,260	0/0:16,0:16:42.13:0,42,520	0/0:14,0:14:39.12:0,39,483	0/0:7,0:7:21.07:0,21,260	0/0:24,0:24:69.20:0,69,842	0/0:23,0:23:63.20:0,63,781	0/0:26,0:26:69.22:0,69,855	0/1:14,13:27:99:449,0,306	0/0:16,0:16:42.13:0,42,520	0/0:6,0:6:15.05:0,15,186	0/0:19,0:19:54.17:0,54,669	0/0:19,0:19:54.17:0,54,669	0/0:11,0:10:33.10:0,33,409	0/0:13,0:13:36.11:0,36,446	0/0:20,0:20:54.17:0,54,669	0/0:25,0:25:66.16:0,66,800
chr10	107000758	.	A	AG	1478.38	PASS	AB=0.755;AC=6;AF=0.107;AN=56;BaseQRankSum=9.900;DP=719;FS=4.603;HRun=3;HaplotypeScore=76.3980;InbreedingCoeff=-0.1357;MQ=43.00;MQ0=85;MQRankSum=-5.861;QD=6.75;ReadPosRankSum=-1.501;VQSLOD=0.1718;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:43:87.25:0,87,1030	0/1:8,2:8:62.75:63,0,143	0/0:20,0:1:3.01:0,3,35	0/0:17,0:1:3.01:0,3,36	0/0:24,0:24:42.03:0,42,459	0/0:21,0:21:33.10:0,33,396	0/0:29,0:22:39.03:0,39,428	0/1:30,10:28:99:216,0,445	0/0:20,0:20:36.11:0,36,431	0/0:31,0:28:78.24:0,78,934	0/0:20,0:19:45.13:0,45,528	0/0:21,0:21:48.15:0,48,576	0/0:14,0:14:18.06:0,18,215	0/0:21,0:21:35.94:0,36,431	0/0:22,0:22:48.13:0,48,560	0/0:15,0:14:39.12:0,39,468	0/0:33,0:31:54.14:0,54,631	0/0:24,0:18:45.14:0,45,538	0/1:27,11:29:99:237,0,485	0/1:33,12:35:99:203,0,720	0/1:19,22:28:99:390,0,327	0/0:15,0:15:30.09:0,30,360	0/0:24,0:22:39.10:0,39,456	0/0:24,0:20:45.08:0,45,522	0/0:10,0:10:21.05:0,21,241	0/0:32,0:28:81.19:0,81,935	0/1:24,21:41:99:493,0,518	0/0:18,0:12:24.07:0,24,288
chr10	107002300	.	A	AG	4949.39	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-11.272;DP=530;FS=2.857;HRun=1;HaplotypeScore=49.9299;InbreedingCoeff=0.9979;MQ=86.84;MQ0=0;MQRankSum=-1.943;QD=40.90;ReadPosRankSum=-1.156;VQSLOD=4.8275;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1485	1/1:1,11:12:33.11:494,33,0	0/0:23,0:23:66.18:0,66,811	0/0:14,0:14:33.11:0,33,423	0/0:24,0:24:72.23:0,72,934	0/0:15,0:15:45.15:0,45,584	0/0:23,0:23:66.21:0,66,855	1/1:1,21:22:66.20:953,66,0	0/0:15,0:15:45.13:0,45,570	0/0:15,0:15:42.14:0,42,544	0/0:15,0:15:45.15:0,45,584	1/1:1,14:15:36.12:540,36,0	0/0:7,0:7:21.07:0,21,273	0/0:15,0:15:42.14:0,42,545	0/0:22,0:22:66.21:0,66,857	0/0:18,0:18:51.17:0,51,662	0/0:40,0:40:99:0,117,1519	0/0:22,0:22:63.15:0,63,784	1/1:1,16:17:45.15:670,45,0	1/1:1,8:9:24.08:360,24,0	1/1:1,31:32:90.30:1349,90,0	0/0:15,0:15:45.15:0,45,584	0/0:8,0:8:21.07:0,21,273	0/0:16,0:16:48.10:0,48,590	0/0:11,0:11:33.11:0,33,429	0/0:26,0:26:75.24:0,75,974	1/1:0,14:14:39.13:584,39,0	0/0:25,0:25:75.23:0,75,958
chr10	107003575	.	G	GA	281.69	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.842;DP=666;FS=5.397;HRun=1;HaplotypeScore=68.6333;InbreedingCoeff=0.9978;MQ=81.64;MQ0=0;MQRankSum=-2.181;QD=35.21;ReadPosRankSum=1.213;VQSLOD=3.7029;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,108,1472	1/1:0,8:8:24.08:375,24,0	0/0:19,0:19:54.10:0,54,669	0/0:17,0:17:45.12:0,45,603	0/0:22,0:22:63.14:0,63,824	0/0:23,0:23:63.16:0,63,805	0/0:28,0:28:81.22:0,81,1088	0/0:33,0:33:90.24:0,90,1183	0/0:25,0:25:66.16:0,66,841	0/0:38,0:38:99:0,105,1371	0/0:21,0:21:53.97:0,54,700	0/0:22,0:22:63.20:0,63,862	0/0:17,0:17:41.90:0,42,551	0/0:26,0:26:75.23:0,75,1007	0/0:25,0:25:66.20:0,66,892	0/0:18,0:18:48.15:0,48,655	0/0:22,0:22:66.21:0,66,906	0/0:34,0:34:96.26:0,96,1319	0/0:21,0:21:60.14:0,60,773	0/0:21,0:21:60.12:0,60,779	0/0:40,0:40:99:0,117,1550	0/0:17,0:17:45.13:0,45,589	0/0:18,0:18:45.15:0,45,624	0/0:28,0:28:81.22:0,81,1094	0/0:13,0:13:39.13:0,39,538	0/0:30,0:30:87.26:0,87,1151	0/0:19,0:19:57.14:0,57,729	0/0:18,0:18:51.17:0,51,710
chr10	107005308	.	G	GACAC	407.79	PASS	AB=0.820;AC=9;AF=0.173;AN=52;BaseQRankSum=3.760;DP=849;FS=2.045;HRun=0;HaplotypeScore=155.2444;InbreedingCoeff=0.0507;MQ=59.52;MQ0=28;MQRankSum=-2.300;QD=1.74;ReadPosRankSum=-0.713;VQSLOD=2.6417;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:65:66.99:0,67,868	1/1:4,2:8:8.80:191,9,0	./.	./.	0/0:16,0:22:27.07:0,27,366	0/1:16,0:25:39.36:39,0,56	0/0:37,0:38:17.37:0,17,455	0/1:26,0:23:13.87:62,0,14	0/0:29,0:31:21.09:0,21,481	0/0:29,0:34:28.54:0,29,314	0/0:12,0:12:6.02:0,6,94	0/1:19,0:28:14.12:67,0,14	0/0:26,0:29:33.09:0,33,455	0/0:23,0:28:45.11:0,45,597	0/0:29,0:31:36.10:0,36,522	0/0:33,0:35:29.20:0,29,672	0/0:40,0:42:48.15:0,48,728	0/0:25,0:32:51.09:0,51,657	0/1:13,0:12:4.64:5,0,59	0/1:14,0:19:12.95:13,0,60	0/1:51,0:95:99:125,0,222	0/0:20,0:20:18.05:0,18,261	0/0:15,0:17:15.03:0,15,196	0/0:42,0:48:62.50:0,63,805	0/0:12,0:13:17.96:0,18,212	0/0:22,0:23:23.15:0,23,258	0/1:11,0:14:42.37:42,0,58	0/0:9,0:9:20.81:0,21,260
chr10	107005625	.	AGACT	A	4842.12	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.573;DP=688;FS=0.419;HRun=0;HaplotypeScore=119.4327;InbreedingCoeff=0.9961;MQ=67.15;MQ0=0;MQRankSum=-5.049;QD=47.01;ReadPosRankSum=-0.204;VQSLOD=5.4725;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,2838	0/0:14,0:14:42.12:0,42,1084	0/0:30,0:30:90.02:0,90,2235	0/0:24,0:24:66.23:0,66,1579	0/0:35,0:35:99:0,102,2738	0/0:35,0:35:99:0,105,2828	0/0:28,0:28:78.27:0,78,2114	1/1:0,17:17:51.11:869,51,0	0/0:29,0:29:84.29:0,84,2337	0/0:38,0:38:99:0,108,2954	0/0:15,0:15:39.13:0,39,1056	0/0:30,0:30:90.31:0,90,2410	0/0:25,0:25:72.25:0,72,2007	0/0:19,0:19:57.20:0,57,1595	0/0:20,0:20:60.21:0,60,1667	0/0:23,0:23:66.23:0,66,1808	0/0:27,0:27:78.27:0,78,2134	0/0:26,0:26:78.27:0,78,2181	1/1:0,14:13:36.10:681,36,0	1/1:0,29:29:75.19:1426,75,0	1/1:1,15:16:30.03:533,30,0	0/0:24,0:24:69.24:0,69,1920	0/0:24,0:24:72.25:0,72,2013	0/0:20,0:20:51.18:0,51,1427	0/0:27,0:27:75.24:0,75,1987	0/0:31,0:31:93.32:0,93,2553	1/1:0,27:27:69.17:1334,69,0	0/0:5,0:5:15.05:0,15,419
chr10	107006048	.	G	GAGGGACACCCTGT	20795.61	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-3.329;DP=746;FS=7.645;HRun=0;HaplotypeScore=248.7416;InbreedingCoeff=0.9992;MQ=82.42;MQ0=0;MQRankSum=-14.816;QD=117.49;ReadPosRankSum=-4.208;VQSLOD=3.1211;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,150,5574	1/1:5,7:14:39.13:2303,39,0	0/0:24,0:24:72.25:0,72,2341	0/0:25,0:25:72.24:0,72,2007	0/0:38,0:38:99:0,108,4018	0/0:17,0:17:45.15:0,45,1641	0/0:15,0:15:45.15:0,45,1610	1/1:27,1:29:75.19:2577,75,0	0/0:23,0:23:63.22:0,63,2432	0/0:38,0:38:99:0,114,4378	0/0:20,0:20:57.20:0,57,2267	1/1:13,11:29:69.24:4135,69,0	0/0:23,0:23:69.22:0,69,2608	0/0:25,0:25:69.22:0,69,2450	0/0:26,0:26:78.27:0,78,3028	0/0:22,0:22:60.20:0,60,2207	0/0:32,0:32:87.30:0,87,3288	0/0:24,0:24:72.25:0,72,2649	1/1:14,3:18:54.18:2397,54,0	1/1:9,17:31:66.23:3895,66,0	1/1:13,5:21:30.10:1837,30,0	0/0:30,0:30:84.29:0,84,3318	0/0:30,0:30:84.29:0,84,3211	0/0:33,0:33:90.31:0,90,3536	0/0:29,0:29:81.28:0,81,3194	0/0:36,0:36:99:0,105,3910	1/1:9,12:25:60.21:3652,60,0	0/0:8,0:8:21.07:0,21,839
chr10	107006721	.	GA	G	2896.88	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=12.315;DP=586;FS=1.208;HRun=10;HaplotypeScore=63.8191;InbreedingCoeff=0.9162;MQ=73.49;MQ0=0;MQRankSum=0.370;QD=17.35;ReadPosRankSum=-1.204;VQSLOD=3.8144;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:78.18:0,78,842	1/1:1,8:9:23.99:208,24,0	0/0:16,0:13:7.94:0,8,130	0/1:16,0:13:5.21:5,0,93	0/0:26,0:26:66.18:0,66,728	0/0:23,0:23:66.18:0,66,730	0/0:13,0:13:36.10:0,36,397	1/1:7,19:26:56.91:482,57,0	0/0:22,0:22:45.11:0,45,490	0/0:17,0:17:48.10:0,48,520	0/0:33,0:33:62.06:0,62,895	1/1:2,16:18:35.99:313,36,0	0/0:10,0:10:24.05:0,24,256	0/0:15,0:16:47.95:0,48,504	0/0:19,0:19:51.14:0,51,564	0/0:13,0:13:39.09:0,39,422	0/0:20,0:20:57.15:0,57,630	0/0:22,0:22:54.15:0,54,597	1/1:5,16:22:50.02:422,50,0	1/1:1,26:28:46.84:623,47,0	1/1:2,19:21:44.99:391,45,0	0/0:16,0:16:48.13:0,48,531	0/0:27,1:28:43.10:0,43,682	0/0:28,0:28:72.19:0,72,796	0/0:18,0:21:47.80:0,48,493	0/0:32,0:32:90.24:0,90,996	1/1:1,26:27:74.98:651,75,0	0/0:12,0:12:33.09:0,33,365
chr10	107006936	.	TG	T	13522.74	PASS	AB=0.800;AC=55;AF=0.982;AN=56;BaseQRankSum=-2.401;DP=475;FS=2.806;HRun=5;HaplotypeScore=53.5975;InbreedingCoeff=-0.0174;MQ=82.00;MQ0=0;MQRankSum=-2.359;QD=28.47;ReadPosRankSum=2.377;VQSLOD=5.2958;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:35:99:1122,99,0	1/1:0,8:8:18.05:204,18,0	1/1:4,4:8:9.48:103,9,0	0/1:12,4:16:6.27:187,0,6	1/1:2,7:9:20.99:218,21,0	1/1:0,20:20:39.11:442,39,0	1/1:0,16:16:45.13:510,45,0	1/1:2,13:15:33.09:374,33,0	1/1:0,21:21:60.17:680,60,0	1/1:0,9:9:27.06:295,27,0	1/1:1,10:10:26.91:272,27,0	1/1:0,26:26:75.21:851,75,0	1/1:0,11:11:30.09:340,30,0	1/1:0,17:17:48.14:544,48,0	1/1:0,14:14:42.12:476,42,0	1/1:0,10:10:27.08:306,27,0	1/1:0,29:29:75.21:850,75,0	1/1:0,16:16:42.12:476,42,0	1/1:1,18:19:51.14:578,51,0	1/1:0,7:7:21.06:238,21,0	1/1:2,25:27:66.19:748,66,0	1/1:2,10:12:27.08:305,27,0	1/1:1,9:10:21.06:238,21,0	1/1:1,33:34:90.22:1005,90,0	1/1:0,18:18:45.13:510,45,0	1/1:3,16:19:48.05:527,48,0	1/1:2,23:25:60.17:679,60,0	1/1:0,13:13:39.11:442,39,0
chr10	107007686	.	G	GA	1432.62	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-4.570;DP=387;FS=29.138;HRun=7;HaplotypeScore=39.7567;InbreedingCoeff=0.8556;MQ=78.41;MQ0=0;MQRankSum=-2.283;QD=19.90;ReadPosRankSum=-1.588;VQSLOD=1.4556;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:51.06:0,51,485	0/0:2,0:2:6.01:0,6,58	0/0:16,0:12:14.93:0,15,128	0/1:12,0:10:2.34:2,0,49	0/0:24,0:24:60.08:0,60,573	0/0:17,0:17:42.06:0,42,406	0/0:14,0:14:36.05:0,36,347	1/1:4,14:18:42.13:505,42,0	0/0:11,0:11:30.03:0,30,283	0/0:20,0:20:57.09:0,57,550	0/0:18,0:18:48.07:0,48,463	0/0:6,0:6:12.02:0,12,116	0/0:8,0:8:21.03:0,21,201	0/0:8,0:8:24.02:0,24,225	0/0:11,0:11:33.05:0,33,318	0/0:5,0:5:15.01:0,15,139	0/0:24,0:24:59.31:0,59,556	0/0:34,0:34:81.12:0,81,782	1/1:2,7:9:21.05:237,21,0	1/1:2,9:11:24.07:290,24,0	1/1:0,6:6:12.03:134,12,0	0/0:9,0:9:14.23:0,14,123	0/0:7,0:7:18.03:0,18,174	0/0:3,0:3:6.01:0,6,58	0/0:20,0:20:57.09:0,57,550	0/0:16,0:16:44.53:0,45,428	1/1:0,16:16:36.11:435,36,0	0/0:22,0:22:56.95:0,57,537
chr10	107007758	.	G	GA	446.70	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.467;DP=457;FS=0.000;HRun=6;HaplotypeScore=47.0435;InbreedingCoeff=0.9890;MQ=77.32;MQ0=0;MQRankSum=-1.825;QD=27.92;ReadPosRankSum=1.208;VQSLOD=3.9434;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:65.96:0,66,637	1/1:0,7:7:18.06:226,18,0	0/0:11,0:11:26.35:0,26,263	0/0:12,0:12:26.74:0,27,258	0/0:19,0:19:51.10:0,51,514	0/0:16,0:16:45.10:0,45,459	0/0:10,0:10:27.06:0,27,275	0/0:26,0:26:60.07:0,60,600	0/0:11,0:11:30.05:0,30,299	0/0:19,0:19:48.11:0,48,490	0/0:25,0:25:75.13:0,75,750	1/1:0,9:9:27.09:340,27,0	0/0:11,0:11:27.06:0,27,275	0/0:7,0:7:21.05:0,21,214	0/0:14,0:14:42.10:0,42,429	0/0:8,0:8:24.05:0,24,245	0/0:25,0:25:69.09:0,69,683	0/0:29,0:29:87.17:0,87,877	0/0:18,0:18:48.11:0,48,490	0/0:19,0:19:54.12:0,54,551	0/0:17,0:17:42.09:0,42,429	0/0:9,0:9:27.05:0,27,268	0/0:15,0:15:45.10:0,45,459	0/0:14,0:14:39.06:0,39,390	0/0:14,0:14:42.10:0,42,429	0/0:27,0:27:78.17:0,78,794	0/0:16,0:16:36.08:0,36,367	0/0:22,0:22:59.61:0,60,611
chr10	107008690	.	GA	G	1383.36	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.039;DP=422;FS=1.110;HRun=8;HaplotypeScore=58.4045;InbreedingCoeff=0.9501;MQ=70.81;MQ0=9;MQRankSum=0.489;QD=18.95;ReadPosRankSum=0.017;VQSLOD=3.4016;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.19:0,63,758	0/0:7,0:7:21.06:0,21,254	0/0:33,0:18:19.59:0,20,289	0/0:24,0:12:10.05:0,10,132	0/0:25,0:25:66.20:0,66,797	0/0:12,0:12:33.10:0,33,395	0/0:9,0:9:25.63:0,26,294	1/1:6,17:23:56.42:519,56,0	0/0:16,0:16:41.59:0,42,456	0/0:11,0:11:33.10:0,33,398	0/0:18,0:18:45.08:0,45,515	0/0:10,0:9:22.31:0,22,256	0/0:9,0:9:27.04:0,27,310	0/0:8,0:8:24.06:0,24,278	0/0:3,0:3:6.02:0,6,72	0/0:11,0:11:27.07:0,27,315	0/0:39,0:39:99:0,114,1358	0/0:21,0:21:57.12:0,57,650	1/1:4,9:11:27.04:261,27,0	1/1:3,13:16:39.05:372,39,0	1/1:1,6:7:15.02:145,15,0	0/0:5,0:5:12.04:0,12,144	0/0:10,0:10:30.09:0,30,362	0/0:16,0:16:44.79:0,45,508	0/0:12,0:12:33.09:0,33,388	0/0:14,0:14:42.12:0,42,496	1/1:2,12:14:27.04:261,27,0	0/0:12,0:12:36.11:0,36,435
chr10	107009417	.	C	CTTCT	3204.31	PASS	AC=28;AF=0.700;AN=40;BaseQRankSum=-3.909;DP=510;FS=3.280;HRun=0;HaplotypeScore=94.4508;InbreedingCoeff=0.8217;MQ=56.01;MQ0=14;MQRankSum=2.013;QD=11.05;ReadPosRankSum=-1.123;VQSLOD=2.9511;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:23:24.50:0,25,301	./.	./.	./.	1/1:11,15:27:42.07:814,42,0	1/1:11,7:18:5.05:75,5,0	1/1:15,0:15:13.70:93,14,0	./.	1/1:19,0:17:14.30:101,14,0	0/0:22,0:22:33.06:0,33,423	0/0:18,0:17:27.01:0,27,381	./.	1/1:6,5:12:2.69:68,3,0	1/1:6,7:15:9.03:190,9,0	1/1:16,2:17:18.05:342,18,0	1/1:16,6:20:5.91:85,6,0	1/1:20,15:36:15.05:322,15,0	1/1:26,0:25:12.32:141,12,0	./.	0/0:23,0:23:5.80:0,6,40	./.	1/1:11,10:21:27:482,27,0	1/1:9,5:15:6.02:138,6,0	1/1:18,7:22:12.04:276,12,0	1/1:20,0:19:18.02:238,18,0	0/0:20,0:20:30.09:0,30,420	./.	0/0:28,0:27:33.02:0,33,391
chr10	107009445	.	TTTCTTTCTTTCTTTCTTTCTTTC	T	2252.91	PASS	AB=0.887;AC=8;AF=0.154;AN=52;BaseQRankSum=6.867;DP=507;FS=19.285;HRun=0;HaplotypeScore=276.6785;InbreedingCoeff=0.5442;MQ=52.24;MQ0=29;MQRankSum=-7.086;QD=22.76;ReadPosRankSum=-3.486;VQSLOD=0.2284;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:22:57.02:0,57,3164	0/0:4,0:4:5.05:0,5,14	./.	./.	0/0:28,0:28:84.27:0,84,4558	0/0:17,0:17:33.10:0,33,1458	0/0:15,0:15:39.12:0,39,1464	0/1:15,0:11:15.51:140,0,16	0/0:16,0:14:36.12:0,36,1448	0/0:25,0:23:69.23:0,69,4185	0/0:21,0:19:57.18:0,57,3193	0/1:18,0:17:75.96:253,0,76	0/0:13,0:13:20.58:0,21,808	0/0:15,0:14:24.08:0,24,1259	0/0:16,0:15:39.13:0,39,2197	0/0:18,0:16:27.06:0,27,958	0/0:29,0:27:42.13:0,42,1834	0/0:23,0:20:57.19:0,57,1990	0/1:18,0:10:0.33:358,0,0	0/1:3,14:16:2.98:521,0,3	1/1:12,0:12:15.99:197,16,0	0/0:21,0:20:60.19:0,60,2882	0/0:17,0:17:48.07:0,48,1937	0/0:22,0:18:39.58:0,40,1997	0/0:24,0:22:63.16:0,63,2687	0/0:22,0:22:63.19:0,63,3953	1/1:19,0:18:48.14:926,48,0	0/0:33,0:31:84.21:0,84,4170
chr10	107009468	.	C	CT	1580.76	PASS	AB=0.984;AC=15;AF=0.288;AN=52;BaseQRankSum=5.797;DP=554;FS=1.080;HRun=9;HaplotypeScore=73.4913;InbreedingCoeff=0.5911;MQ=49.58;MQ0=29;MQRankSum=-2.030;QD=10.33;ReadPosRankSum=-3.046;VQSLOD=2.0719;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:25:49.15:0,49,394	1/1:1,3:4:9.02:99,9,0	./.	./.	0/0:27,0:28:9.09:0,9,269	0/0:18,0:17:14.10:0,14,150	0/0:18,0:16:16.26:0,16,259	1/1:9,15:20:0.20:382,0,0	0/0:22,0:20:38.97:0,39,337	0/0:28,1:27:59.98:0,60,521	0/0:14,1:15:8.81:0,9,305	1/1:5,13:17:10.06:336,10,0	0/0:16,0:16:14.09:0,14,150	0/0:18,0:17:3.33:0,3,112	0/1:15,0:14:2.58:3,0,118	0/0:17,0:16:26.10:0,26,254	0/0:36,0:32:11.59:0,12,275	0/0:17,0:16:30.62:0,31,278	1/1:12,7:14:24.06:265,24,0	0/1:19,0:19:49.56:152,0,50	1/1:4,11:12:12.03:132,12,0	0/1:21,0:20:16.16:16,0,191	0/0:20,0:18:22.22:0,22,248	0/0:22,2:20:8.42:0,8,184	0/0:22,0:21:8.68:0,9,197	0/0:24,0:23:59.98:0,60,518	1/1:2,15:16:33.09:364,33,0	0/0:25,0:25:47.94:0,48,411
chr10	107010353	.	A	AG	442.78	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.622;DP=474;FS=4.667;HRun=7;HaplotypeScore=49.8396;InbreedingCoeff=0.9186;MQ=75.91;MQ0=0;MQRankSum=-0.872;QD=21.08;ReadPosRankSum=0.005;VQSLOD=2.9179;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.10:0,66,637	1/1:0,7:7:15.05:181,15,0	0/0:21,0:20:53.71:0,54,461	0/0:13,0:9:4.51:0,5,84	0/0:23,0:23:51.06:0,51,485	0/0:20,0:20:54.07:0,54,516	0/0:10,0:10:24.02:0,24,226	0/0:28,0:28:57.04:0,57,532	0/0:17,0:17:45.06:0,45,428	0/0:21,0:21:51.07:0,51,487	0/0:16,0:16:42.06:0,42,402	1/1:2,12:14:33.03:380,33,0	0/0:9,0:9:27.04:0,27,261	0/0:10,0:10:27.04:0,27,261	0/0:11,0:11:30.04:0,30,290	0/0:12,0:12:30.03:0,30,281	0/0:19,0:19:51.01:0,51,469	0/0:19,0:19:45.07:0,45,434	0/0:11,0:11:27.03:0,27,257	0/0:31,0:31:84.04:0,84,783	0/0:15,0:15:45.02:0,45,424	0/0:18,0:18:48.06:0,48,454	0/0:24,0:24:63.06:0,63,597	0/0:11,0:11:32.99:0,33,304	0/0:16,0:16:48.06:0,48,456	0/0:19,0:19:54.06:0,54,510	0/0:26,0:26:78.11:0,78,747	0/0:7,0:7:18.03:0,18,174
chr10	107010664	.	CACACACAT	C	4723.57	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.902;DP=475;FS=1.498;HRun=0;HaplotypeScore=137.6281;InbreedingCoeff=0.9713;MQ=61.90;MQ0=7;MQRankSum=-8.674;QD=41.80;ReadPosRankSum=-0.324;VQSLOD=4.1904;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:32.99:0,33,855	1/1:0,8:8:9.03:202,9,0	0/0:36,0:24:54.53:0,55,956	0/0:17,0:8:24.08:0,24,810	0/0:24,0:24:62.80:0,63,2085	0/0:19,0:19:51.16:0,51,1837	0/0:19,0:19:39.11:0,39,1390	1/1:8,22:26:60.50:1133,60,0	0/0:19,0:19:54.18:0,54,1986	0/0:20,0:20:54.18:0,54,2105	0/0:16,0:15:39.13:0,39,1304	1/1:1,12:13:27.09:468,27,0	0/0:12,0:12:36.11:0,36,1187	0/0:12,0:12:24.41:0,24,906	0/0:20,0:20:51.16:0,51,1926	0/0:11,0:11:27.09:0,27,999	0/0:11,0:11:6.87:0,7,855	0/0:19,0:19:51.11:0,51,1741	1/1:5,16:21:39.30:897,39,0	1/1:5,14:19:51.08:1074,51,0	1/1:7,4:10:24.06:383,24,0	0/0:14,0:14:39.12:0,39,1476	0/0:17,0:16:42.14:0,42,1544	0/0:19,0:19:51.16:0,51,1852	0/0:17,0:17:48.16:0,48,1733	0/0:14,0:14:36.11:0,36,1312	1/1:5,6:11:32.99:567,33,0	0/0:9,0:8:24.08:0,24,888
chr10	107010690	.	TACACACACACACACAC	T	3001.47	PASS	AB=0.800;AC=13;AF=0.241;AN=54;BaseQRankSum=7.419;DP=491;FS=2.316;HRun=0;HaplotypeScore=214.7814;InbreedingCoeff=0.8079;MQ=51.22;MQ0=20;MQRankSum=-7.724;QD=28.32;ReadPosRankSum=0.694;VQSLOD=2.8287;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:16:21.50:0,22,1004	1/1:5,0:7:6.02:137,6,0	0/0:16,0:5:0:0,0,0	./.	0/0:29,0:29:56.71:0,57,3105	0/0:20,0:20:46.75:0,47,2630	0/0:20,0:20:33.11:0,33,1508	1/1:27,0:21:9.02:155,9,0	0/0:24,0:24:57.67:0,58,3370	0/0:22,0:24:57.20:0,57,3230	0/0:15,0:14:30.10:0,30,1609	0/1:9,0:12:21.42:168,0,21	0/0:12,0:12:36.12:0,36,2032	0/0:12,0:13:18.06:0,18,881	0/0:19,0:20:36.10:0,36,1923	0/0:12,0:12:24.06:0,24,1224	0/0:14,0:15:23.57:0,24,1477	0/0:15,0:18:48.14:0,48,2435	1/1:18,1:17:8.77:260,9,0	1/1:8,11:19:48.16:1702,48,0	1/1:10,1:9:8.56:248,9,0	0/0:16,0:17:42.14:0,42,2444	0/0:16,0:15:33.10:0,33,1698	0/0:21,0:23:57.16:0,57,3243	0/0:20,0:22:52.79:0,53,2874	0/0:15,0:16:36.12:0,36,2117	1/1:8,3:11:15.05:504,15,0	0/0:16,0:15:42.14:0,42,1938
chr10	107010706	.	C	CAAAT	2037.97	PASS	AB=0.855;AC=7;AF=0.125;AN=56;BaseQRankSum=2.668;DP=518;FS=9.153;HRun=0;HaplotypeScore=121.6210;InbreedingCoeff=0.4501;MQ=51.33;MQ0=20;MQRankSum=-3.537;QD=19.41;ReadPosRankSum=-6.360;VQSLOD=1.0523;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:16:8.56:0,9,324	0/0:5,0:5:7.66:0,8,80	0/0:11,0:4:6:0,6,70	0/0:21,0:2:6.02:0,6,97	0/0:28,0:28:64.63:0,65,1192	0/0:22,0:22:51.77:0,52,945	0/0:19,0:19:40.88:0,41,678	0/1:29,0:23:32.62:734,0,33	0/0:24,0:24:66.23:0,66,1222	0/0:27,0:27:72.24:0,72,1248	0/0:16,0:15:42.13:0,42,697	0/0:9,0:9:12.03:0,12,128	0/0:14,0:14:42.07:0,42,686	0/0:12,0:12:29.13:0,29,446	0/0:16,0:16:45.09:0,45,728	0/0:14,0:14:28.64:0,29,527	0/0:16,0:16:17.20:0,17,405	0/0:21,0:21:35.13:0,35,815	0/1:22,1:20:20.14:547,0,20	1/1:14,10:26:12.12:539,12,0	1/1:3,5:9:9.50:196,10,0	0/0:21,0:21:59.89:0,60,926	0/0:17,0:16:48.14:0,48,802	0/0:27,0:27:66.19:0,66,1122	0/0:23,0:23:62.01:0,62,1118	0/0:14,0:14:39.13:0,39,672	0/1:6,10:17:5.90:157,0,6	0/0:18,0:17:48.16:0,48,814
chr10	107010920	.	AAGAT	A	4132.85	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=11.057;DP=582;FS=7.215;HRun=0;HaplotypeScore=104.1129;InbreedingCoeff=0.9365;MQ=63.12;MQ0=1;MQRankSum=-2.580;QD=27.37;ReadPosRankSum=-0.082;VQSLOD=2.9707;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:37.75:0,38,846	1/1:0,9:9:24.04:383,24,0	0/0:18,0:13:27.06:0,27,539	0/1:14,0:11:1.17:1,0,368	0/0:31,0:31:63.22:0,63,1561	0/0:21,0:21:54.12:0,54,1252	0/0:9,0:9:9.20:0,9,298	1/1:8,17:25:45.05:689,45,0	0/0:21,0:21:48.16:0,48,1207	0/0:43,0:42:99:0,102,2367	0/0:27,0:27:72.25:0,72,1802	1/1:10,5:15:23.99:325,24,0	0/0:14,0:14:33.11:0,33,833	0/0:18,0:18:45.15:0,45,1133	0/0:18,0:18:42.14:0,42,1061	0/0:17,0:17:39.13:0,39,985	0/0:21,0:20:42.14:0,42,1010	0/0:17,0:17:45.14:0,45,1059	1/1:3,14:17:42.12:685,42,0	1/1:5,28:32:63.13:1024,63,0	1/1:0,14:14:30.10:518,30,0	0/0:24,0:24:69.24:0,69,1714	0/0:27,0:26:63.22:0,63,1567	0/0:18,0:18:48.16:0,48,1208	0/0:26,0:26:51.17:0,51,1214	0/0:25,0:25:69.24:0,69,1607	1/1:4,20:24:33.04:507,33,0	0/0:13,0:13:36.12:0,36,868
chr10	107010955	.	T	TGATA	1138.09	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=-0.548;DP=570;FS=14.014;HRun=0;HaplotypeScore=117.2841;InbreedingCoeff=0.8964;MQ=55.03;MQ0=4;MQRankSum=-3.170;QD=13.88;ReadPosRankSum=2.001;VQSLOD=2.3110;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,5:26:8.58:113,9,0	0/0:12,0:12:12.04:0,12,187	./.	./.	0/0:19,0:19:27.07:0,27,397	0/0:22,0:22:39.13:0,39,603	0/0:7,0:7:8.34:0,8,133	0/0:29,0:27:21.06:0,21,288	0/0:20,0:20:45.14:0,45,673	0/0:44,0:43:75.25:0,75,1144	0/0:29,0:29:36.11:0,36,540	1/1:9,0:13:6.02:104,6,0	0/0:11,0:11:15.05:0,15,234	0/0:21,0:21:36.11:0,36,539	0/0:18,0:18:36.12:0,36,553	0/0:12,0:12:18.06:0,18,281	1/1:14,7:23:26.52:571,27,0	1/1:5,11:18:21.07:496,21,0	0/0:18,0:19:9.02:0,9,122	0/0:31,0:31:42.14:0,42,654	0/0:20,0:20:33.11:0,33,499	0/0:26,0:26:39.13:0,39,596	0/0:25,0:24:27.09:0,27,421	0/0:18,0:18:18.06:0,18,281	0/0:25,0:25:51.17:0,51,788	0/0:28,0:29:51.17:0,51,796	0/0:26,0:26:42.14:0,42,655	0/0:19,0:19:39.10:0,39,552
chr10	107012511	.	CAT	C	4442.39	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.046;DP=453;FS=14.791;HRun=0;HaplotypeScore=66.2799;InbreedingCoeff=0.9665;MQ=72.71;MQ0=1;MQRankSum=0.822;QD=30.22;ReadPosRankSum=-3.106;VQSLOD=4.1815;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:90.31:0,90,1505	1/1:0,7:7:21.07:270,21,0	0/0:13,0:11:9.01:0,9,106	0/0:17,0:9:11.06:0,11,124	0/0:25,0:25:57.20:0,57,960	0/0:12,0:12:36.12:0,36,607	0/0:5,0:5:15.05:0,15,253	1/1:6,39:45:99:1474,117,0	0/0:12,0:12:27.09:0,27,453	0/0:17,0:17:45.15:0,45,744	0/0:13,0:13:27.09:0,27,441	1/1:1,12:13:30.10:382,30,0	0/0:10,0:10:30.10:0,30,500	0/0:12,0:12:27.09:0,27,456	0/0:6,0:6:9.03:0,9,152	0/0:14,0:14:36.12:0,36,604	0/0:24,0:24:66.23:0,66,1111	0/0:11,0:11:27.09:0,27,447	1/1:11,17:28:72.23:924,72,0	1/1:3,18:21:45.10:560,45,0	1/1:2,10:12:20.90:195,21,0	0/0:9,0:9:24.08:0,24,405	0/0:14,0:14:36.12:0,36,581	0/0:10,0:10:30.10:0,30,505	0/0:16,0:16:42.14:0,42,689	0/0:17,0:17:51.17:0,51,859	1/1:2,19:21:51.12:637,51,0	0/0:13,0:13:39.13:0,39,652
chr10	107012546	.	C	CAT	3228.29	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=9.157;DP=393;FS=2.943;HRun=0;HaplotypeScore=61.5016;InbreedingCoeff=0.9377;MQ=63.59;MQ0=2;MQRankSum=-3.821;QD=30.17;ReadPosRankSum=-2.281;VQSLOD=4.4420;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.20:0,96,1160	0/0:6,0:6:12.01:0,12,122	0/0:13,0:10:5.90:0,6,56	./.	0/0:15,0:15:36.08:0,36,439	0/0:12,0:12:36.09:0,36,440	0/0:8,0:8:24.06:0,24,299	1/1:34,9:43:99:1332,102,0	0/0:9,0:9:24.08:0,24,314	0/0:14,0:14:36.12:0,36,469	0/0:13,0:13:32.86:0,33,363	0/0:6,0:6:12.02:0,12,135	0/0:9,0:9:27.09:0,27,354	0/0:10,0:10:30.10:0,30,393	0/0:7,0:7:21.05:0,21,259	0/0:6,0:6:12.04:0,12,157	0/0:24,0:24:66.17:0,66,819	0/0:12,0:12:30.10:0,30,386	1/1:4,15:19:51.15:799,51,0	1/1:3,6:9:18.06:303,18,0	1/1:7,9:16:18.06:308,18,0	0/0:5,0:5:12.03:0,12,143	0/0:6,0:6:15.05:0,15,197	0/0:11,0:11:27.07:0,27,339	0/0:16,0:16:45.09:0,45,531	0/0:19,0:19:54.16:0,54,683	1/1:6,13:20:39.13:657,39,0	0/0:13,0:13:33.07:0,33,413
chr10	107012684	.	TA	T	425.72	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.090;DP=389;FS=2.244;HRun=1;HaplotypeScore=38.3809;InbreedingCoeff=0.7961;MQ=74.42;MQ0=1;MQRankSum=-0.102;QD=26.61;ReadPosRankSum=-0.117;VQSLOD=3.3394;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:99:0,138,1949	1/1:0,6:6:18.06:250,18,0	0/0:11,0:9:3.46:0,3,144	0/0:13,0:10:1.40:0,1,129	0/0:18,0:18:54.15:0,54,732	0/0:17,0:17:48.14:0,48,658	0/0:13,0:13:39.09:0,39,495	0/0:24,0:24:72.21:0,72,957	0/0:6,0:6:18.06:0,18,248	0/0:16,0:16:48.15:0,48,655	0/0:11,0:11:33.11:0,33,471	1/1:0,10:10:20.86:293,21,0	0/0:13,0:13:39.13:0,39,557	0/0:10,0:10:30.07:0,30,408	0/0:10,0:10:30.10:0,30,403	0/0:8,0:8:24.08:0,24,334	0/0:24,0:24:72.22:0,72,1005	0/0:16,0:16:48.16:0,48,676	0/0:22,0:22:66.13:0,66,880	0/0:11,0:11:33.09:0,33,453	0/0:7,0:7:21.05:0,21,272	0/0:4,0:4:12.03:0,12,145	0/0:5,0:5:15.05:0,15,197	0/0:5,0:5:15.05:0,15,214	0/0:13,0:13:39.10:0,39,521	0/0:18,0:18:54.15:0,54,722	0/0:17,0:17:51.15:0,51,682	0/0:15,0:15:45.13:0,45,597
chr10	107013573	.	TCTCA	T	1972.80	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.359;DP=516;FS=7.566;HRun=0;HaplotypeScore=106.8159;InbreedingCoeff=0.9630;MQ=73.30;MQ0=2;MQRankSum=-3.789;QD=22.68;ReadPosRankSum=-3.765;VQSLOD=1.8900;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.30:0,96,2417	0/0:3,0:3:9.03:0,9,208	0/0:33,0:32:53.64:0,54,1301	0/0:42,0:30:33.23:0,33,912	0/0:13,0:13:36.12:0,36,964	0/0:18,0:18:51.16:0,51,1293	0/0:28,0:28:84.26:0,84,2038	1/1:2,15:17:28.13:562,28,0	0/0:18,0:18:51.17:0,51,1290	0/0:17,0:17:48.16:0,48,1270	0/0:11,0:11:33.03:0,33,715	0/0:20,0:20:60.19:0,60,1550	0/0:20,0:20:54.15:0,54,1287	0/0:16,0:16:48.16:0,48,1255	0/0:18,0:18:54.14:0,54,1221	0/0:9,0:9:27.09:0,27,660	0/0:17,0:17:51.17:0,51,1309	0/0:13,0:13:39.13:0,39,1034	1/1:2,11:13:32.71:524,33,0	1/1:1,7:8:12.04:226,12,0	1/1:5,35:40:24.07:436,24,0	0/0:19,0:19:54.19:0,54,1441	0/0:10,0:10:30.10:0,30,728	0/0:41,0:41:99:0,111,2789	0/0:8,0:8:21.07:0,21,566	0/0:17,0:17:48.13:0,48,1198	1/1:0,9:9:21.07:397,21,0	0/0:3,0:3:9.01:0,9,185
chr10	107013781	.	A	AGTGC	1498.56	PASS	AB=0.952;AC=13;AF=0.232;AN=56;BaseQRankSum=-1.048;DP=469;FS=2.831;HRun=0;HaplotypeScore=84.8473;InbreedingCoeff=0.8135;MQ=68.50;MQ0=9;MQRankSum=-1.873;QD=11.27;ReadPosRankSum=-2.762;VQSLOD=2.3685;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:48.13:0,48,855	1/1:9,0:9:9.32:134,9,0	0/0:24,0:18:51.11:0,51,900	0/0:20,0:13:37.57:0,38,665	0/0:8,0:8:21.03:0,21,376	0/0:11,0:11:21.03:0,21,345	0/0:32,0:32:90.30:0,90,1689	1/1:3,0:12:32.95:501,33,0	0/0:19,0:19:54.19:0,54,1038	0/0:17,0:17:44.78:0,45,829	0/0:12,0:12:36.12:0,36,688	0/1:19,0:20:2.06:149,0,2	0/0:10,0:10:27.06:0,27,448	0/0:16,0:16:42.14:0,42,825	0/0:13,0:12:33.10:0,33,620	0/0:9,0:9:27.09:0,27,518	0/0:17,0:16:42.14:0,42,816	0/0:18,0:18:45.13:0,45,805	1/1:1,15:16:40.65:706,41,0	1/1:1,12:13:3.01:54,3,0	1/1:9,31:46:3.01:36,3,0	0/0:9,0:9:21.07:0,21,416	0/0:8,0:8:24.08:0,24,406	0/0:30,0:30:78.23:0,78,1397	0/0:15,0:15:14.29:0,14,521	0/0:16,0:16:31.27:0,31,785	1/1:3,12:14:3.01:84,3,0	0/0:11,0:11:23.41:0,23,331
chr10	107013784	.	GCACA	G	188.76	PASS	AB=0.809;AC=4;AF=0.087;AN=46;BaseQRankSum=3.598;DP=488;FS=0.000;HRun=0;HaplotypeScore=80.5013;InbreedingCoeff=0.1726;MQ=63.77;MQ0=11;MQRankSum=-2.367;QD=2.86;ReadPosRankSum=-0.057;VQSLOD=1.0678;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:24:17.79:0,18,249	0/0:9,0:9:5.85:0,6,68	./.	./.	./.	0/0:20,0:20:11.29:0,11,253	0/1:34,3:37:34.29:34,0,62	./.	0/0:21,0:21:9.03:0,9,181	0/0:19,0:18:6.02:0,6,113	0/0:14,0:13:9:0,9,162	1/1:15,0:20:15.02:139,15,0	0/0:8,0:8:12.04:0,12,203	0/0:18,0:18:6:0,6,67	0/0:13,0:13:9.02:0,9,138	0/0:10,0:10:6.91:0,7,120	0/0:19,0:18:12.01:0,12,181	0/0:23,0:23:26.27:0,26,371	0/0:12,0:12:6.02:0,6,96	./.	0/0:48,0:47:3.01:0,3,57	0/0:9,0:9:6.02:0,6,86	0/0:8,0:9:8.77:0,9,130	0/0:27,0:29:38.52:0,39,554	0/0:15,0:15:9.03:0,9,149	0/0:16,0:16:12.02:0,12,174	0/0:12,0:10:3.01:0,3,68	0/1:5,4:9:84.78:122,0,85
chr10	107014481	.	CGTGTGTGTGTGTGTGTGTGTGT	C	727.94	PASS	AB=0.913;AC=6;AF=0.107;AN=56;BaseQRankSum=3.931;DP=529;FS=2.826;HRun=0;HaplotypeScore=270.2078;InbreedingCoeff=0.2342;MQ=64.53;MQ0=7;MQRankSum=1.989;QD=5.39;ReadPosRankSum=-0.052;VQSLOD=2.5224;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:42.13:0,42,2090	0/0:7,0:8:12.04:0,12,519	0/0:18,0:9:3.01:0,3,42	0/0:24,0:19:17.90:0,18,317	0/0:16,0:16:15.05:0,15,625	0/0:18,0:17:21.07:0,21,1083	0/0:28,0:28:45.14:0,45,2218	0/1:21,0:21:32.76:66,0,33	0/0:15,0:15:27.09:0,27,1251	0/0:17,0:17:27.09:0,27,1273	0/0:12,0:12:18.04:0,18,795	0/0:11,0:14:21.02:0,21,792	0/0:9,0:9:17.98:0,18,824	0/0:14,0:14:18.04:0,18,671	0/0:13,0:13:24.08:0,24,1140	0/0:5,0:7:9.03:0,9,497	0/0:40,0:42:93.30:0,93,6987	0/0:15,0:18:39.12:0,39,2038	0/1:12,14:25:5.22:311,0,5	0/1:22,0:21:9:51,0,9	0/1:53,0:51:6.90:277,0,7	0/0:14,0:14:27.08:0,27,1751	0/0:10,0:10:15.05:0,15,752	0/0:21,0:26:45.61:0,46,3241	0/0:14,0:14:12.04:0,12,588	0/0:25,0:25:48.11:0,48,1363	1/1:13,0:13:2.01:142,2,0	0/0:8,0:8:15.05:0,15,917
chr10	107014503	.	TGTGTGTGTGTGTGTGTGTGTGTGTCTGTGGCTGTGG	T	932.22	PASS	AB=0.906;AC=6;AF=0.107;AN=56;BaseQRankSum=5.621;DP=543;FS=0.000;HRun=0;HaplotypeScore=367.1430;InbreedingCoeff=0.1517;MQ=49.20;MQ0=24;MQRankSum=-0.938;QD=7.52;ReadPosRankSum=-1.270;VQSLOD=1.2237;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:57.16:0,57,3468	0/0:5,0:5:12.04:0,12,385	0/0:27,0:4:11.99:0,12,128	0/0:32,0:9:27.05:0,27,499	0/0:11,0:11:24.08:0,24,1638	0/0:15,0:13:33.11:0,33,2022	0/0:30,0:30:69.22:0,69,4337	0/1:8,12:19:11.57:534,0,12	0/0:13,0:13:33.11:0,33,1775	0/0:16,0:15:39.13:0,39,1972	0/0:12,0:11:24.06:0,24,1459	0/0:13,0:13:30.57:0,31,885	0/0:9,0:9:23.80:0,24,1212	0/0:19,0:19:37.35:0,37,2511	0/0:18,0:18:36.10:0,36,2416	0/0:11,0:11:27.09:0,27,2272	0/0:38,0:38:99:0,111,9941	0/1:28,0:28:51.69:52,0,5188	0/1:24,0:21:96.57:97,0,250	0/0:17,0:16:14.63:0,15,134	0/1:39,0:37:99:167,0,199	0/0:13,0:13:30.09:0,30,1999	0/0:8,0:8:15.05:0,15,598	0/0:32,0:32:78.74:0,79,7194	0/0:14,0:13:23.97:0,24,1371	0/0:27,0:27:77.58:0,78,3044	1/1:13,0:13:2.68:203,3,0	0/0:9,0:9:27.09:0,27,2634
chr10	107014504	.	G	GTC	367.44	PASS	AB=0.975;AC=8;AF=0.143;AN=56;BaseQRankSum=5.609;DP=541;FS=14.670;HRun=0;HaplotypeScore=92.9709;InbreedingCoeff=0.3469;MQ=49.29;MQ0=26;MQRankSum=1.300;QD=3.17;ReadPosRankSum=-1.562;VQSLOD=1.0880;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:54.38:0,54,473	0/1:6,0:6:13.31:13,0,82	0/0:26,0:3:5.60:0,6,52	0/0:34,0:9:20.85:0,21,168	0/0:11,0:11:20.87:0,21,159	0/0:15,0:13:32.94:0,33,285	0/0:30,0:30:68.94:0,69,680	0/1:20,0:19:7.15:53,0,7	0/0:13,0:13:32.28:0,32,304	0/0:16,0:15:37.68:0,38,340	0/0:12,0:11:23.97:0,24,216	0/0:13,0:13:29.89:0,30,237	0/0:10,0:10:23.35:0,23,221	0/0:19,0:19:35.73:0,36,324	0/0:18,0:18:35.74:0,36,274	0/0:11,0:11:26.95:0,27,221	0/0:38,0:38:99:0,111,1241	0/0:28,0:28:72.28:0,72,603	1/1:24,0:21:7.77:220,8,0	0/1:17,0:16:8.99:51,0,9	0/1:32,4:35:31.29:148,0,31	0/0:14,0:14:29.22:0,29,290	0/0:8,0:8:14.99:0,15,143	0/0:32,0:32:74.35:0,74,714	0/0:14,0:13:18.85:0,19,147	0/0:24,0:24:69.51:0,70,549	1/1:13,0:13:2.59:12,3,0	0/0:9,0:9:24.38:0,24,205
chr10	107014505	.	TGTGTGTGTGTGTGTGTGTGTGTCTGTGGCTGTGG	T	1650.93	PASS	AB=0.898;AC=8;AF=0.143;AN=56;BaseQRankSum=4.259;DP=540;FS=5.044;HRun=0;HaplotypeScore=344.4174;InbreedingCoeff=0.3893;MQ=49.15;MQ0=26;MQRankSum=1.832;QD=12.41;ReadPosRankSum=-2.152;VQSLOD=1.4145;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:60.17:0,60,3471	0/0:6,0:6:15.05:0,15,418	0/0:26,0:3:9.02:0,9,109	0/0:36,0:11:29.91:0,30,489	0/0:11,0:11:24.08:0,24,1552	0/0:15,0:13:33.11:0,33,1900	0/0:30,0:30:69.22:0,69,4077	1/1:19,0:18:30.28:700,30,0	0/0:13,0:13:33.11:0,33,1685	0/0:16,0:15:39.13:0,39,1887	0/0:12,0:11:24.07:0,24,1395	0/0:13,0:13:30.55:0,31,759	0/0:11,0:11:29.88:0,30,1478	0/0:20,0:20:40.36:0,40,2515	0/0:18,0:18:36.10:0,36,2239	0/0:11,0:11:27.09:0,27,2119	0/0:38,0:38:99:0,114,9767	0/1:28,0:28:51.26:51,0,4863	0/1:23,0:20:42.36:350,0,42	0/1:5,11:15:9:51,0,9	0/1:34,0:33:6.45:387,0,6	0/0:15,0:15:36.11:0,36,2305	0/0:8,0:8:15.05:0,15,611	0/0:32,0:32:78.74:0,79,6912	0/0:13,0:12:20.97:0,21,1231	0/0:24,0:24:71.41:0,71,2815	1/1:0,13:13:2.70:250,3,0	0/0:9,0:9:27.09:0,27,2498
chr10	107014508	.	G	GGC	93.47	PASS	AB=0.943;AC=5;AF=0.089;AN=56;BaseQRankSum=5.948;DP=545;FS=7.816;HRun=0;HaplotypeScore=96.5149;InbreedingCoeff=0.2555;MQ=49.84;MQ0=23;MQRankSum=-1.113;QD=1.07;ReadPosRankSum=-0.308;VQSLOD=1.2203;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:57.15:0,57,842	0/0:6,0:6:6.14:0,6,171	0/0:26,0:3:2.68:0,3,11	0/0:38,0:10:20.73:0,21,248	0/0:11,0:11:24.08:0,24,356	0/0:15,0:13:33.10:0,33,481	0/0:31,0:31:65.80:0,66,1024	0/1:19,0:18:3.68:65,0,4	0/0:13,0:13:33.08:0,33,481	0/0:16,0:15:39.13:0,39,580	0/0:11,0:10:20.42:0,20,252	0/0:13,0:13:30.06:0,30,424	0/0:12,0:12:27.01:0,27,382	0/0:19,0:19:35.93:0,36,545	0/0:18,0:18:36.10:0,36,522	0/0:12,0:12:30.09:0,30,437	0/0:37,0:37:99:0,108,1606	0/0:28,0:28:72.62:0,73,974	0/1:25,0:23:8.73:9,0,209	0/0:13,0:12:2.99:0,3,24	0/1:23,6:28:46.60:111,0,47	0/0:15,0:15:33.10:0,33,490	0/0:9,0:9:14.84:0,15,230	0/0:37,0:37:77.76:0,78,1122	0/0:13,0:12:20.67:0,21,261	0/0:24,0:24:62.43:0,62,836	1/1:13,0:13:2.26:14,2,0	0/0:10,0:10:27.08:0,27,374
chr10	107014532	.	GGC	G	335.77	PASS	AB=0.885;AC=10;AF=0.179;AN=56;BaseQRankSum=6.273;DP=498;FS=7.121;HRun=0;HaplotypeScore=80.4222;InbreedingCoeff=0.5300;MQ=53.86;MQ0=25;MQRankSum=-0.564;QD=3.26;ReadPosRankSum=-0.190;VQSLOD=0.9951;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:46.38:0,46,860	0/1:4,0:4:35.30:35,0,35	0/0:45,0:14:33.05:0,33,484	0/0:51,1:16:30.54:0,31,508	0/0:7,0:7:18.06:0,18,350	0/0:13,0:12:30.10:0,30,580	0/0:23,0:23:66.21:0,66,1293	1/1:15,0:13:2.65:188,3,0	0/0:8,1:9:18.06:0,18,350	0/0:13,0:13:36.11:0,36,639	0/0:10,0:9:18.06:0,18,351	1/1:8,0:8:11.91:172,12,0	0/0:11,0:11:30.06:0,30,557	0/0:13,0:13:35.99:0,36,711	0/0:14,0:14:36.12:0,36,698	0/0:14,0:14:39.13:0,39,746	0/0:41,0:41:99:0,116,2230	0/0:19,0:19:36.27:0,36,997	0/1:17,0:15:57.84:58,0,122	0/1:12,0:11:0:0,0,0	0/1:5,29:32:0.29:0,0,1	0/0:11,0:11:27.09:0,27,486	0/0:8,0:8:15.04:0,15,291	0/0:36,1:37:97.57:0,98,1819	0/0:8,0:7:12.04:0,12,242	0/0:14,0:14:14.11:0,14,533	1/1:13,0:13:2.37:9,2,0	0/0:8,0:8:24.08:0,24,487
chr10	107016200	.	GA	G	2553.03	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=10.633;DP=486;FS=1.866;HRun=9;HaplotypeScore=54.7680;InbreedingCoeff=0.8580;MQ=64.57;MQ0=4;MQRankSum=0.125;QD=16.91;ReadPosRankSum=-0.764;VQSLOD=3.5039;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:55:99:0,159,1781	1/1:0,6:6:15:137,15,0	0/1:18,0:11:2.86:3,0,157	0/1:9,0:4:7.17:7,0,56	0/0:24,0:24:60.16:0,60,678	0/0:16,0:16:36.09:0,36,405	0/0:16,0:16:45.13:0,45,519	1/1:1,20:20:57.03:521,57,0	0/0:8,0:8:18.05:0,18,206	0/0:17,0:17:39.10:0,39,439	0/0:18,0:17:45.13:0,45,510	1/1:1,18:19:42.02:384,42,0	0/0:13,0:13:36.07:0,36,387	0/0:12,0:13:29.92:0,30,326	0/0:13,0:13:33.09:0,33,371	0/0:9,0:9:24.07:0,24,277	0/0:31,1:32:62.38:0,62,941	0/0:20,0:20:51.15:0,51,589	1/1:2,17:18:54:484,54,0	1/1:8,16:23:42:384,42,0	1/1:3,12:15:36.02:329,36,0	0/0:15,0:15:30.09:0,30,346	0/0:7,0:7:15.04:0,15,165	0/0:18,0:18:26.74:0,27,561	0/0:11,0:11:26.95:0,27,292	0/0:21,0:21:54.16:0,54,623	1/1:1,18:20:56.07:500,56,0	0/0:9,0:9:21.06:0,21,242
chr10	107016581	.	G	GA	1293.50	PASS	AB=0.941;AC=15;AF=0.268;AN=56;BaseQRankSum=6.465;DP=545;FS=0.512;HRun=10;HaplotypeScore=89.7789;InbreedingCoeff=0.7674;MQ=48.56;MQ0=26;MQRankSum=-7.412;QD=8.80;ReadPosRankSum=-6.588;VQSLOD=0.9612;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:19.44:0,19,454	1/1:7,0:5:6.45:51,6,0	0/0:17,1:3:0.88:0,1,2	0/0:35,0:2:2.41:0,2,9	0/0:32,0:30:44.56:0,45,361	0/0:18,0:18:32.55:0,33,270	0/0:29,0:29:59.63:0,60,475	1/1:19,14:29:28.89:431,29,0	0/1:15,1:16:25.31:25,0,138	0/0:12,0:12:11.69:0,12,98	0/0:15,0:12:20.92:0,21,168	1/1:12,0:13:21.84:92,22,0	0/0:13,0:13:20.56:0,21,166	0/0:9,0:9:14.81:0,15,115	0/0:10,0:10:14.94:0,15,118	0/0:9,0:9:17.97:0,18,148	0/0:42,0:43:63.18:0,63,604	0/0:28,0:26:25.35:0,25,362	1/1:13,3:15:29.69:260,30,0	1/1:11,14:23:26.17:227,26,0	1/1:8,3:11:8.97:80,9,0	0/0:16,0:16:29.91:0,30,246	0/0:11,0:11:1.18:0,1,143	0/0:26,0:26:31.95:0,32,252	0/0:11,0:11:22.75:0,23,173	0/0:17,1:17:24.02:0,24,229	1/1:22,3:24:41.02:314,41,0	0/0:9,0:7:7.90:0,8,55
chr10	107016601	.	A	AAAAAG	2336.94	PASS	AB=0.968;AC=16;AF=0.286;AN=56;BaseQRankSum=5.562;DP=589;FS=1.112;HRun=0;HaplotypeScore=115.1589;InbreedingCoeff=0.7325;MQ=56.45;MQ0=22;MQRankSum=-7.951;QD=10.77;ReadPosRankSum=-1.689;VQSLOD=2.7897;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:69.17:0,69,1051	1/1:8,0:6:9.01:125,9,0	0/1:36,0:13:8.62:9,0,105	0/1:49,0:12:42.68:53,0,43	0/0:28,0:26:53.94:0,54,751	0/0:17,0:17:24:0,24,318	0/0:32,0:32:51.10:0,51,787	1/1:33,0:29:40.24:574,40,0	0/0:11,0:11:27.04:0,27,376	0/0:15,0:15:33.06:0,33,464	0/0:10,0:10:9.02:0,9,108	1/1:8,0:12:2.37:8,2,0	0/0:13,0:13:3.28:0,3,49	0/0:17,0:17:39.06:0,39,512	0/0:8,0:8:21.03:0,21,265	0/0:13,0:13:30.08:0,30,459	0/0:39,0:39:74.39:0,74,1067	0/0:27,0:26:48.05:0,48,699	1/1:15,3:17:32.95:488,33,0	1/1:24,1:24:29.87:385,30,0	1/1:6,1:8:5.95:100,6,0	0/0:17,0:17:21.05:0,21,314	0/0:17,0:17:22.29:0,22,285	0/0:22,0:21:39.05:0,39,596	0/0:18,0:18:33.04:0,33,413	0/0:18,0:18:26.86:0,27,350	1/1:23,2:24:42.13:781,42,0	0/0:11,0:10:21.06:0,21,303
chr10	107018087	.	C	CT	2945.59	PASS	AB=0.552;AC=13;AF=0.232;AN=56;BaseQRankSum=-9.490;DP=656;FS=2.823;HRun=10;HaplotypeScore=70.7006;InbreedingCoeff=0.8690;MQ=76.12;MQ0=0;MQRankSum=-1.096;QD=19.00;ReadPosRankSum=-2.994;VQSLOD=3.4555;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:38:75.42:0,75,747	1/1:3,9:12:24.06:256,24,0	0/0:16,0:16:23.53:0,24,173	0/0:13,0:16:10.74:0,11,97	0/0:19,0:20:52.95:0,53,425	0/0:21,0:22:43.95:0,44,351	0/0:29,0:29:59.84:0,60,488	1/1:8,18:27:47.14:515,47,0	0/0:22,0:24:43.94:0,44,351	0/0:21,0:21:41.92:0,42,345	0/0:14,0:14:35.95:0,36,296	1/1:2,19:22:44.91:450,45,0	0/0:15,0:15:29.92:0,30,246	0/0:18,1:19:15.95:0,16,337	0/0:31,3:35:9.93:0,10,484	0/0:21,1:22:21.91:0,22,387	0/0:39,0:39:92.82:0,93,763	0/0:15,0:16:40.99:0,41,326	1/1:7,18:25:51.08:525,51,0	0/1:3,13:16:7.22:324,0,7	1/1:6,23:29:19.87:616,20,0	0/0:21,0:21:30.96:0,31,350	0/0:27,0:28:67.23:0,67,546	0/0:37,0:37:98.82:0,99,807	0/0:16,1:17:3.95:0,4,239	0/0:26,0:26:53.89:0,54,443	1/1:5,19:22:42.58:449,43,0	0/0:24,1:25:27.94:0,28,436
chr10	107018418	.	T	TC	3077.15	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-1.066;DP=463;FS=7.249;HRun=3;HaplotypeScore=56.4032;InbreedingCoeff=0.9633;MQ=69.21;MQ0=0;MQRankSum=-0.318;QD=25.64;ReadPosRankSum=0.261;VQSLOD=2.3189;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:89.99:0,90,980	1/1:12,0:12:17.97:153,18,0	0/0:21,0:17:26.11:0,26,264	0/0:8,0:7:14.41:0,14,112	0/0:19,0:19:48.10:0,48,556	0/0:14,0:14:33.10:0,33,394	0/0:17,0:17:45.09:0,45,512	1/1:6,11:17:27.11:270,27,0	0/0:9,0:9:9.11:0,9,190	0/0:20,0:20:47.91:0,48,486	0/0:16,0:16:48:0,48,517	1/1:0,19:19:45.15:589,45,0	0/0:16,0:16:33.88:0,34,354	0/0:15,0:15:32.93:0,33,366	0/0:19,0:19:54.07:0,54,592	0/0:8,0:8:21.02:0,21,235	0/0:33,0:33:96.26:0,96,1112	0/0:18,0:18:39.10:0,39,448	1/1:5,15:20:48.16:662,48,0	1/1:7,13:20:54.09:679,54,0	1/1:8,16:24:57.05:693,57,0	0/0:11,0:11:30.09:0,30,359	0/0:20,0:20:60.13:0,60,682	0/0:15,0:15:42.08:0,42,475	0/0:16,0:16:36.09:0,36,410	0/0:12,0:12:30.02:0,30,339	1/1:3,5:8:18.05:229,18,0	0/0:5,0:5:6.02:0,6,72
chr10	107018421	.	C	CCG	1483.84	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.264;DP=465;FS=8.096;HRun=0;HaplotypeScore=73.2308;InbreedingCoeff=0.9428;MQ=69.26;MQ0=0;MQRankSum=-0.528;QD=11.87;ReadPosRankSum=0.456;VQSLOD=2.0373;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.02:0,90,1262	1/1:0,12:12:20.92:335,21,0	0/0:19,0:16:31.76:0,32,270	0/0:9,0:9:14.33:0,14,148	0/0:18,0:18:51.08:0,51,757	0/0:13,0:13:36.05:0,36,546	0/0:16,0:17:48.11:0,48,692	1/1:19,0:19:25.64:157,26,0	0/0:9,0:9:23.51:0,24,282	0/0:20,0:22:53.82:0,54,665	0/0:16,0:16:47.95:0,48,641	1/1:18,0:18:42.01:199,42,0	0/0:17,0:17:39.21:0,39,535	0/0:17,0:17:38.92:0,39,536	0/0:18,0:18:54.08:0,54,752	0/0:7,0:7:21.07:0,21,326	0/0:34,0:34:99:0,99,1479	0/0:17,0:17:39.11:0,39,598	1/1:21,0:21:1.80:193,2,0	1/1:21,0:22:52.20:325,52,0	1/1:24,1:25:58.06:376,58,0	0/0:10,0:10:30.10:0,30,476	0/0:20,0:20:60.15:0,60,888	0/0:15,0:15:45.03:0,45,640	0/0:14,0:14:38.14:0,38,537	0/0:12,0:12:30.02:0,30,439	1/1:7,0:8:16.97:89,17,0	0/0:4,0:4:8.95:0,9,115
chr10	107018488	.	ATTG	A	3130.97	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.250;DP=522;FS=0.000;HRun=0;HaplotypeScore=79.0312;InbreedingCoeff=0.9977;MQ=85.54;MQ0=0;MQRankSum=-1.754;QD=35.58;ReadPosRankSum=-0.409;VQSLOD=3.9953;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,2353	0/0:16,0:16:45.14:0,45,943	0/0:25,0:25:69.24:0,69,1407	0/0:18,0:18:45.12:0,45,885	0/0:13,0:13:39.12:0,39,812	0/0:23,0:23:66.21:0,66,1401	0/0:19,0:19:48.16:0,48,1048	1/1:5,16:21:48.12:693,48,0	0/0:15,0:15:42.14:0,42,918	0/0:22,0:22:63.22:0,63,1333	0/0:27,0:27:75.26:0,75,1623	0/0:15,0:15:45.15:0,45,983	0/0:17,0:17:51.18:0,51,1112	0/0:14,0:14:42.14:0,42,917	0/0:20,0:20:54.14:0,54,1133	0/0:9,0:9:24.08:0,24,524	0/0:26,0:26:72.25:0,72,1553	0/0:19,0:19:48.12:0,48,1004	1/1:3,13:16:42.14:666,42,0	1/1:1,24:25:60.20:949,60,0	1/1:3,15:18:42.14:666,42,0	0/0:18,0:18:51.18:0,51,1114	0/0:21,0:21:54.19:0,54,1175	0/0:8,0:8:24.08:0,24,525	0/0:10,0:10:27.09:0,27,591	0/0:30,0:30:90.30:0,90,1928	1/1:0,8:8:21.07:333,21,0	0/0:13,0:12:30.10:0,30,650
chr10	107022050	.	CCTCTT	C	5349.91	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.219;DP=587;FS=1.468;HRun=0;HaplotypeScore=108.4105;InbreedingCoeff=0.9977;MQ=81.84;MQ0=0;MQRankSum=-9.677;QD=51.44;ReadPosRankSum=-0.073;VQSLOD=5.2533;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,172,5636	0/0:6,0:6:18.06:0,18,600	0/0:24,0:24:72.25:0,72,2114	0/0:21,0:20:60.18:0,60,1695	0/0:18,0:18:54.19:0,54,1791	0/0:19,0:19:57.18:0,57,1812	0/0:33,0:33:99:0,99,3262	1/1:0,22:22:60.21:1372,60,0	0/0:16,0:16:48.15:0,48,1513	0/0:20,0:20:60.20:0,60,1903	0/0:15,0:15:45.15:0,45,1481	0/0:17,0:17:51.18:0,51,1698	0/0:18,0:18:54.19:0,54,1769	0/0:22,0:22:66.23:0,66,2175	0/0:19,0:19:57.20:0,57,1899	0/0:12,0:12:36.12:0,36,1200	0/0:24,0:23:72.25:0,72,2344	0/0:22,0:22:66.21:0,66,2122	1/1:0,12:12:30.10:698,30,0	1/1:0,14:14:27.09:608,27,0	1/1:0,36:36:60.13:1361,60,0	0/0:16,0:16:48.15:0,48,1505	0/0:25,0:25:72.25:0,72,2355	0/0:29,0:29:87.30:0,87,2841	0/0:19,0:19:57.20:0,57,1876	0/0:20,0:20:60.21:0,60,1994	1/1:1,19:20:57.20:1311,57,0	0/0:11,0:11:33.11:0,33,1043
chr10	107022616	.	T	TC	1168.66	PASS	AB=0.642;AC=9;AF=0.161;AN=56;BaseQRankSum=-3.550;DP=467;FS=4.728;HRun=10;HaplotypeScore=57.2787;InbreedingCoeff=0.5259;MQ=80.86;MQ0=0;MQRankSum=-1.539;QD=10.82;ReadPosRankSum=-3.097;VQSLOD=2.0533;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:70.91:0,71,572	1/1:1,1:2:3.01:32,3,0	0/0:22,0:21:20.81:0,21,233	0/0:15,0:15:17.67:0,18,165	0/0:10,0:11:13.98:0,14,101	0/0:15,0:17:39.64:0,40,296	0/0:19,0:19:50.93:0,51,419	1/1:9,13:22:5.40:251,5,0	0/0:14,0:14:32.95:0,33,270	0/0:10,0:10:17.97:0,18,148	0/0:11,0:11:17.92:0,18,138	0/0:2,0:16:30.55:0,31,89	0/0:22,0:22:55.93:0,56,444	0/0:7,0:7:14.98:0,15,123	0/0:13,0:13:23.96:0,24,197	0/0:13,0:13:32.96:0,33,271	0/0:38,0:38:89.87:0,90,739	0/0:22,0:23:61.93:0,62,498	1/1:18,8:26:30.67:349,31,0	0/1:4,3:7:12.61:83,0,13	0/1:13,15:28:16.21:255,0,16	0/0:10,0:10:20.97:0,21,172	0/0:9,0:9:20.97:0,21,172	0/0:20,0:20:47.92:0,48,394	0/0:10,0:9:20.95:0,21,172	0/0:15,0:17:28.02:0,28,209	0/1:6,17:22:7.38:342,0,7	0/0:9,0:9:11.97:0,12,98
chr10	107022915	.	A	AT	722.64	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.813;DP=477;FS=0.830;HRun=3;HaplotypeScore=51.7333;InbreedingCoeff=0.9662;MQ=83.26;MQ0=0;MQRankSum=-2.545;QD=27.79;ReadPosRankSum=1.059;VQSLOD=2.7722;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:93.24:0,93,1088	1/1:1,5:6:12.04:168,12,0	0/0:15,0:15:38.95:0,39,383	0/0:17,0:17:26.12:0,26,295	0/0:14,0:14:39.09:0,39,440	0/0:17,0:17:48.07:0,48,535	0/0:30,0:30:87.21:0,87,990	0/0:17,0:17:45.12:0,45,522	0/0:9,0:9:26.28:0,26,283	0/0:14,0:14:42.12:0,42,487	0/0:11,0:11:33.08:0,33,381	1/1:0,20:20:48.16:671,48,0	0/0:19,0:19:51.15:0,51,606	0/0:21,0:21:60.15:0,60,695	0/0:11,0:11:33.08:0,33,373	0/0:11,0:11:33.05:0,33,350	0/0:28,0:28:84.23:0,84,982	0/0:18,0:18:51.13:0,51,589	0/0:14,0:14:39.10:0,39,447	0/0:15,0:15:44.62:0,45,466	0/0:32,0:32:93.18:0,93,1026	0/0:16,0:16:41.98:0,42,470	0/0:11,0:11:30.09:0,30,360	0/0:24,0:23:66.16:0,66,756	0/0:15,0:15:45.11:0,45,516	0/0:17,0:17:44.93:0,45,476	0/0:16,0:16:48.12:0,48,551	0/0:4,0:4:12.04:0,12,144
chr10	107023411	.	AGT	A	609.28	PASS	AB=0.929;AC=17;AF=0.315;AN=54;BaseQRankSum=5.941;DP=738;FS=6.049;HRun=0;HaplotypeScore=97.0416;InbreedingCoeff=-0.3331;MQ=59.98;MQ0=9;MQRankSum=1.725;QD=1.42;ReadPosRankSum=1.612;VQSLOD=1.1304;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:48:36.47:0,36,588	0/1:7,0:7:8.87:9,0,41	0/0:26,0:14:2.92:0,3,17	./.	0/1:14,4:18:12.22:12,0,207	0/1:23,2:25:27.54:28,0,370	0/0:35,3:37:8.68:0,9,530	0/0:26,0:25:4.72:0,5,212	0/1:33,5:38:51.63:52,0,529	0/1:21,0:22:6.15:6,0,261	0/0:7,0:7:3.01:0,3,38	1/1:17,13:30:10.08:338,10,0	0/0:25,0:27:45.06:0,45,579	0/1:21,3:23:38.45:38,0,331	0/1:26,3:27:58.68:59,0,303	0/0:24,2:25:2.82:0,3,416	0/1:38,2:42:11.05:11,0,721	0/0:40,0:40:54.13:0,54,764	0/1:20,0:23:18.15:18,0,109	0/1:9,0:15:10.26:10,0,22	0/1:60,2:66:8.22:8,0,484	0/1:11,2:13:15.20:15,0,205	0/1:12,2:14:15.19:15,0,198	0/1:37,5:42:99:125,0,554	0/1:18,1:19:15.79:16,0,243	0/0:21,0:21:30.09:0,30,411	0/0:10,0:14:11.99:0,12,102	0/0:7,0:6:9:0,9,112
chr10	107023788	.	ATCTAGGC	A	5429.51	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.192;DP=678;FS=8.176;HRun=0;HaplotypeScore=154.4786;InbreedingCoeff=0.9929;MQ=93.00;MQ0=0;MQRankSum=-11.519;QD=41.13;ReadPosRankSum=-2.156;VQSLOD=3.6437;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:55:99:0,147,5553	0/0:8,0:8:24.08:0,24,945	0/0:36,0:36:83.63:0,84,2719	0/0:25,0:25:59.82:0,60,1767	0/0:20,0:20:54.17:0,54,1923	0/0:20,0:20:57.20:0,57,2141	0/0:35,0:35:99:0,99,3758	1/1:3,33:36:98.98:1894,99,0	0/0:24,0:24:72.24:0,72,2642	0/0:22,0:22:57.20:0,57,2227	0/0:7,0:7:21.07:0,21,826	0/0:33,0:33:96.32:0,96,3556	0/0:19,0:19:48.16:0,48,1887	0/0:23,0:23:66.23:0,66,2467	0/0:34,0:34:96.33:0,96,3636	0/0:17,0:17:48.15:0,48,1794	0/0:23,0:23:60.21:0,60,2309	0/0:27,0:27:78.27:0,78,2975	1/1:6,10:17:24.03:501,24,0	1/1:4,15:19:39.13:988,39,0	1/1:7,24:31:15.94:381,16,0	0/0:7,0:7:18.06:0,18,706	0/0:15,0:15:27.09:0,27,982	0/0:32,0:32:93.32:0,93,3659	0/0:17,0:17:48.16:0,48,1876	0/0:27,0:27:81.28:0,81,3122	1/1:3,26:29:66.23:1665,66,0	0/0:19,0:19:57.20:0,57,2214
chr10	107026111	.	AGT	A	447.89	PASS	AB=0.883;AC=12;AF=0.214;AN=56;BaseQRankSum=5.719;DP=699;FS=2.807;HRun=0;HaplotypeScore=105.4419;InbreedingCoeff=-0.3106;MQ=67.57;MQ0=8;MQRankSum=2.874;QD=1.44;ReadPosRankSum=2.500;VQSLOD=2.0810;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:30:8.04:0,8,739	0/0:5,0:5:3.01:0,3,30	0/0:45,0:27:37.30:0,37,503	0/1:37,3:26:7.51:8,0,306	0/0:20,2:22:6.74:0,7,551	0/0:22,0:24:51.16:0,51,771	0/1:26,0:28:12.55:13,0,501	0/0:24,0:22:37.24:0,37,396	0/0:15,1:17:1.11:0,1,466	0/1:23,7:30:99:153,0,593	0/1:18,4:22:51.05:51,0,632	0/1:13,3:16:59.87:60,0,503	0/0:16,2:18:4.12:0,4,519	0/0:21,1:22:10.61:0,11,612	0/1:27,2:29:0.82:1,0,872	0/1:21,3:24:53.85:54,0,607	0/0:32,0:32:60.20:0,60,933	0/0:37,0:37:40.31:0,40,841	0/0:16,0:23:55.57:0,56,515	0/0:13,0:20:16.73:0,17,136	0/0:17,0:24:2.90:0,3,16	0/1:23,4:27:47.83:48,0,695	0/0:21,1:23:4.96:0,5,649	0/1:30,2:33:20.94:21,0,771	0/1:17,2:19:21.86:22,0,609	0/1:23,3:26:16.06:16,0,616	0/0:9,0:22:38.98:0,39,371	0/1:10,5:15:99:142,0,249
chr10	107027182	.	TA	T	333.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.979;DP=592;FS=1.010;HRun=7;HaplotypeScore=59.5036;InbreedingCoeff=0.9836;MQ=91.32;MQ0=0;MQRankSum=-2.014;QD=18.54;ReadPosRankSum=1.505;VQSLOD=3.3805;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1531	0/0:6,0:6:15.05:0,15,189	0/0:30,0:30:72.16:0,72,824	0/0:22,0:22:36.51:0,37,424	0/0:31,0:31:84.27:0,84,1057	0/0:25,0:25:69.21:0,69,852	0/0:24,0:24:66.19:0,66,813	0/0:32,0:32:84.27:0,84,1056	0/0:21,0:21:57.18:0,57,713	0/0:14,0:14:36.12:0,36,453	0/0:11,0:11:30.10:0,30,377	1/1:2,16:18:42.09:428,42,0	0/0:17,0:17:48.15:0,48,604	0/0:19,0:19:51.16:0,51,632	0/0:18,0:18:54.16:0,54,667	0/0:18,0:18:54.16:0,54,666	0/0:24,0:24:60.15:0,60,737	0/0:20,0:20:51.12:0,51,623	0/0:24,0:24:63.20:0,63,791	0/0:16,0:16:45.14:0,45,566	0/0:18,0:18:54.17:0,54,679	0/0:17,0:17:51.16:0,51,642	0/0:14,0:14:39.12:0,39,491	0/0:19,0:19:57.18:0,57,711	0/0:28,0:28:69.22:0,69,868	0/0:19,0:19:48.15:0,48,592	0/0:26,0:26:75.23:0,75,929	0/0:19,0:19:57.18:0,57,717
chr10	107028072	.	AACAC	A	641.01	PASS	AB=0.927;AC=17;AF=0.354;AN=48;BaseQRankSum=-1.067;DP=550;FS=1.942;HRun=0;HaplotypeScore=101.3519;InbreedingCoeff=0.1490;MQ=66.56;MQ0=21;MQRankSum=0.622;QD=2.50;ReadPosRankSum=0.716;VQSLOD=1.6931;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:39:3:43,3,0	./.	./.	./.	1/1:9,0:8:2.37:8,2,0	0/1:15,2:15:35.28:37,0,35	0/1:26,0:26:4.45:62,0,4	0/0:21,0:19:0:0,0,0	1/1:20,0:20:13.45:120,13,0	0/0:14,0:14:3.01:0,3,37	0/0:4,0:4:2.99:0,3,24	0/0:16,0:16:3.01:0,3,51	0/0:12,0:12:2.98:0,3,21	0/1:12,1:13:10.98:40,0,11	0/1:14,0:14:6.13:16,0,6	0/0:20,0:20:14.72:0,15,236	0/1:32,3:33:49.18:237,0,49	0/1:15,0:14:38.41:44,0,38	0/0:20,0:19:7.84:0,8,110	0/0:20,0:19:11.14:0,11,47	0/0:45,0:45:36.09:0,36,588	1/1:14,2:16:3.01:46,3,0	./.	0/1:25,8:33:6.08:65,0,6	1/1:17,0:16:6.01:66,6,0	0/0:26,0:26:18.44:0,18,248	0/0:18,0:17:3.01:0,3,48	0/0:10,0:8:12.04:0,12,238
chr10	107028120	.	C	CACACAG	1600.76	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-1.945;DP=569;FS=0.507;HRun=0;HaplotypeScore=124.9013;InbreedingCoeff=0.8721;MQ=59.81;MQ0=26;MQRankSum=-1.440;QD=12.13;ReadPosRankSum=-1.109;VQSLOD=2.6624;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:56.70:0,57,446	0/0:5,0:5:6.88:0,7,51	0/0:20,0:8:11.19:0,11,142	0/0:27,0:17:31.52:0,32,368	0/0:13,0:12:20.89:0,21,161	0/0:15,0:15:23.17:0,23,177	0/0:31,0:30:57.72:0,58,438	1/1:29,0:26:35.22:435,35,0	0/0:25,0:24:4.85:0,5,355	0/0:17,0:17:43.31:0,43,373	0/0:11,0:10:26.70:0,27,206	1/1:1,14:18:3.01:97,3,0	0/0:14,0:14:29.73:0,30,227	0/0:12,0:12:23.80:0,24,205	0/0:18,0:18:38.44:0,38,326	0/0:28,0:25:48.02:0,48,398	0/0:39,0:36:73.73:0,74,635	0/0:21,0:19:38.25:0,38,320	1/1:14,0:11:12.36:207,12,0	1/1:16,0:15:20.79:199,21,0	1/1:43,0:42:30.50:730,30,0	0/0:9,0:9:17.99:0,18,172	0/0:12,0:11:11.98:0,12,98	0/0:33,0:33:56.47:0,56,504	0/0:15,0:14:19.76:0,20,157	0/0:27,0:27:60.64:0,61,525	1/1:5,0:11:5.72:105,6,0	0/0:14,0:12:29.27:0,29,231
chr10	107028122	.	C	CAGAC	1451.28	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=-1.387;DP=557;FS=3.107;HRun=0;HaplotypeScore=100.7926;InbreedingCoeff=0.7149;MQ=62.11;MQ0=25;MQRankSum=0.240;QD=10.99;ReadPosRankSum=-0.289;VQSLOD=2.9941;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:62.44:0,62,490	0/0:5,0:5:10.23:0,10,76	0/0:20,0:8:11.19:0,11,142	0/0:29,0:19:31.80:0,32,369	0/0:14,0:13:26.88:0,27,207	0/0:12,0:12:27.35:0,27,233	0/0:30,0:29:61.28:0,61,462	1/1:28,0:25:35.32:435,35,0	0/0:24,0:23:53.76:0,54,437	0/0:16,0:16:44.09:0,44,376	0/0:11,0:10:26.70:0,27,206	1/1:18,0:18:3.01:54,3,0	0/0:12,0:12:29.73:0,30,227	0/0:12,0:12:26.81:0,27,216	0/0:18,0:18:37.31:0,37,322	0/0:27,0:24:46.14:0,46,374	0/0:36,0:33:85.18:0,85,676	0/0:19,0:18:38.25:0,38,302	1/1:15,0:12:13.84:181,14,0	1/1:10,5:16:20.79:202,21,0	0/1:42,0:41:24.25:649,0,24	0/0:8,0:8:17.99:0,18,160	0/0:12,0:11:14.96:0,15,119	0/0:33,0:33:56.50:0,56,475	0/0:13,0:12:22.76:0,23,182	0/0:26,0:26:65.99:0,66,583	0/1:12,0:11:4.98:89,0,5	0/0:14,0:12:30.81:0,31,284
chr10	107028962	.	TAC	T	364.99	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.281;DP=623;FS=4.644;HRun=0;HaplotypeScore=71.0284;InbreedingCoeff=0.9417;MQ=86.75;MQ0=0;MQRankSum=-1.831;QD=33.18;ReadPosRankSum=0.207;VQSLOD=5.6657;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1865	1/1:1,10:11:30.10:459,30,0	0/0:20,0:20:54.18:0,54,1033	0/0:22,0:22:63.22:0,63,1185	0/0:21,0:21:60.21:0,60,1135	0/0:24,0:23:72.23:0,72,1356	0/0:39,0:39:99:0,114,2143	0/0:18,0:18:51.17:0,51,985	0/0:32,0:32:96.32:0,96,1796	0/0:17,0:17:48.16:0,48,903	0/0:9,0:9:27.09:0,27,521	0/0:16,0:16:48.16:0,48,927	0/0:28,0:28:84.27:0,84,1573	0/0:21,0:21:63.22:0,63,1205	0/0:22,0:22:66.23:0,66,1263	0/0:15,0:15:45.15:0,45,869	0/0:46,0:46:99:0,135,2591	0/0:30,0:30:90.27:0,90,1689	0/0:17,0:17:48.16:0,48,920	0/0:4,0:4:9.03:0,9,174	0/0:46,0:46:99:0,135,2561	0/0:16,0:16:45.15:0,45,863	0/0:12,0:12:36.12:0,36,695	0/0:36,0:36:99:0,105,2008	0/0:14,0:14:33.11:0,33,638	0/0:19,0:19:54.19:0,54,1044	0/0:27,0:26:81.27:0,81,1487	0/0:8,0:8:24.03:0,24,390
chr10	107030891	.	ACT	A	941.41	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=1.246;DP=456;FS=2.111;HRun=0;HaplotypeScore=73.6737;InbreedingCoeff=0.9240;MQ=76.38;MQ0=1;MQRankSum=-3.299;QD=9.32;ReadPosRankSum=-0.087;VQSLOD=3.3818;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:65.88:0,66,811	1/1:4,2:6:11.78:104,12,0	0/0:25,1:20:25.32:0,25,311	0/0:21,0:20:43.50:0,43,403	0/0:25,0:25:69.99:0,70,890	0/0:10,0:10:20.98:0,21,255	0/0:18,0:18:44.96:0,45,572	1/1:31,0:31:31.86:360,32,0	0/0:10,0:10:14.88:0,15,132	0/0:15,0:15:28.99:0,29,268	0/0:18,0:18:29.25:0,29,315	0/0:10,0:10:17.98:0,18,247	0/0:9,0:9:21.02:0,21,246	0/0:16,0:16:32.42:0,32,349	0/0:13,0:12:23.89:0,24,227	0/0:10,0:10:21.04:0,21,276	0/0:20,0:19:35.98:0,36,414	0/0:19,0:19:17.69:0,18,387	1/1:17,1:18:11.24:177,11,0	1/1:15,2:17:8.72:229,9,0	1/1:9,9:18:4.76:103,5,0	0/0:14,0:14:29.66:0,30,296	0/0:12,0:12:27.05:0,27,321	0/0:18,0:17:26.99:0,27,292	0/0:5,0:5:12.03:0,12,166	0/0:15,0:15:29.97:0,30,327	1/1:11,0:11:14.32:141,14,0	0/0:23,0:22:56.10:0,56,623
chr10	107030897	.	TC	T	1401.97	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=1.564;DP=459;FS=17.793;HRun=1;HaplotypeScore=74.3568;InbreedingCoeff=0.9374;MQ=68.88;MQ0=6;MQRankSum=-4.905;QD=12.86;ReadPosRankSum=-2.818;VQSLOD=0.6578;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:66.25:0,66,621	1/1:10,0:10:12.44:107,12,0	0/0:22,0:16:28.27:0,28,297	0/0:20,0:18:42.49:0,42,372	0/0:27,0:26:46.06:0,46,626	0/0:9,0:9:20.07:0,20,194	0/0:18,0:18:43.09:0,43,419	1/1:30,4:34:71.33:564,71,0	0/0:10,0:9:12.75:0,13,96	0/0:13,0:12:29.03:0,29,251	0/0:19,1:20:28.32:0,28,251	0/0:11,0:11:17.41:0,17,180	0/0:12,0:12:5.30:0,5,178	0/0:16,0:16:31.88:0,32,283	0/0:9,0:8:22.44:0,22,180	0/0:9,0:9:21:0,21,212	0/0:22,0:21:21.52:0,22,327	0/0:18,0:17:27.41:0,27,299	1/1:12,3:15:32.69:259,33,0	1/1:16,5:21:36.58:327,37,0	1/1:13,3:15:13.56:131,14,0	0/0:14,0:14:13.59:0,14,233	0/0:10,0:10:11.57:0,12,231	0/0:20,0:19:26.30:0,26,242	0/0:6,0:6:11.96:0,12,129	0/0:14,0:14:31.72:0,32,278	1/1:11,2:13:23.66:198,24,0	0/0:21,0:20:57.64:0,58,499
chr10	107031381	.	ATG	A	6098.78	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=15.462;DP=974;FS=17.376;HRun=0;HaplotypeScore=141.5809;InbreedingCoeff=0.9976;MQ=56.98;MQ0=19;MQRankSum=0.924;QD=24.59;ReadPosRankSum=1.103;VQSLOD=4.5037;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,157,2583	0/0:12,0:12:36.12:0,36,609	0/0:59,0:21:47.02:0,47,752	0/0:47,0:19:35.73:0,36,505	0/0:26,0:26:51.17:0,51,873	0/0:29,0:29:51.19:0,51,1105	0/0:48,0:48:99:0,105,1746	1/1:10,22:30:63.16:778,63,0	0/0:35,0:35:87.28:0,87,1443	0/0:27,0:27:74.55:0,75,1185	0/0:11,0:11:24.08:0,24,403	0/0:28,0:28:72.23:0,72,1193	0/0:26,0:26:69.02:0,69,1139	0/0:32,0:32:81.28:0,81,1384	0/0:25,0:25:54.18:0,54,926	0/0:17,0:17:47.37:0,47,782	0/0:57,0:57:99:0,159,2601	0/0:35,0:34:93.18:0,93,1539	1/1:9,23:32:66.10:837,66,0	1/1:4,34:38:74.98:920,75,0	1/1:14,110:123:99:2967,226,0	0/0:26,0:26:66.22:0,66,1102	0/0:17,0:17:45.01:0,45,706	0/0:53,0:53:99:0,144,2373	0/0:21,0:21:51.17:0,51,856	0/0:33,0:33:84.29:0,84,1431	1/1:0,22:22:45.13:597,45,0	0/0:6,0:6:18.06:0,18,312
chr10	107033354	.	T	TC	217.59	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.604;DP=576;FS=4.069;HRun=8;HaplotypeScore=65.3049;InbreedingCoeff=0.9618;MQ=71.14;MQ0=1;MQRankSum=-0.639;QD=13.60;ReadPosRankSum=0.259;VQSLOD=3.4470;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96:0,96,867	0/0:14,0:14:38.02:0,38,325	0/0:30,0:27:44.82:0,45,460	0/0:20,0:18:38.03:0,38,317	0/0:14,0:15:38.06:0,38,335	0/0:16,0:16:45.02:0,45,412	0/0:32,0:32:78.02:0,78,714	0/0:16,0:16:25.59:0,26,204	0/0:17,0:17:45.01:0,45,405	0/0:23,0:23:60.02:0,60,546	0/0:6,0:6:15.01:0,15,137	1/1:4,12:15:27.08:312,27,0	0/0:14,0:14:36.02:0,36,329	0/0:19,0:19:48.02:0,48,439	0/0:19,0:19:51:0,51,461	0/0:8,0:8:24:0,24,215	0/0:50,0:50:99:0,135,1234	0/0:23,0:23:60.03:0,60,548	0/0:9,0:9:24.01:0,24,220	0/0:19,0:19:47.60:0,48,412	0/0:33,0:33:60.19:0,60,685	0/0:23,0:23:30.38:0,30,435	0/0:17,0:17:39:0,39,353	0/0:32,0:32:90.05:0,90,823	0/0:22,0:22:38.98:0,39,354	0/0:14,0:14:36.01:0,36,329	0/0:27,0:27:75.04:0,75,685	0/0:6,0:6:15:0,15,136
chr10	107033647	.	CGT	C	433.24	PASS	AB=0.909;AC=17;AF=0.327;AN=52;BaseQRankSum=3.109;DP=733;FS=4.945;HRun=0;HaplotypeScore=95.4188;InbreedingCoeff=-0.2837;MQ=61.64;MQ0=6;MQRankSum=1.131;QD=1.09;ReadPosRankSum=2.337;VQSLOD=1.4357;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:44:14.62:15,0,500	0/0:10,0:10:0:0,0,0	./.	./.	0/1:24,0:24:57.25:57,0,137	0/1:13,1:13:17.84:18,0,108	0/0:30,0:29:10.34:0,10,358	0/0:28,0:28:7.18:0,7,43	0/1:27,6:33:65.56:66,0,232	0/0:32,0:32:25.72:0,26,327	0/1:15,0:14:5.34:5,0,199	0/1:24,9:34:30.02:98,0,30	0/1:21,2:23:38.61:39,0,245	0/0:20,0:27:24:0,24,267	0/1:21,3:26:76.82:77,0,368	0/1:27,4:32:10.85:11,0,386	0/1:33,1:31:16.77:17,0,601	0/1:24,0:24:16.32:16,0,324	0/0:14,0:14:8.98:0,9,82	0/0:20,0:20:17.99:0,18,165	0/0:40,0:67:23.75:0,24,186	0/1:23,4:27:35.94:36,0,268	0/1:17,2:19:8.83:9,0,231	0/0:51,0:52:44.86:0,45,970	0/1:19,3:22:19.68:20,0,246	0/1:15,1:17:3.12:67,0,3	0/0:19,0:23:14.98:0,15,144	1/1:5,0:6:5.80:33,6,0
chr10	107033821	.	GTGTCTGTCTGTC	G	4206.42	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.640;DP=866;FS=4.777;HRun=0;HaplotypeScore=288.2442;InbreedingCoeff=0.9790;MQ=62.19;MQ0=7;MQRankSum=-10.615;QD=20.93;ReadPosRankSum=-2.803;VQSLOD=1.6406;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:74,0:74:99:0,163,8265	1/1:4,7:11:20.41:428,20,0	0/0:44,0:28:32.47:0,32,1209	0/0:46,0:35:27.07:0,27,1136	0/0:27,0:27:66.23:0,66,3274	0/0:16,0:16:24.08:0,24,1376	0/0:43,0:43:87.30:0,87,4312	1/1:30,0:30:8.99:141,9,0	0/0:33,0:35:47.54:0,48,2520	0/0:28,0:28:33.11:0,33,1615	0/0:16,0:16:18.06:0,18,979	1/1:22,21:43:47.77:1329,48,0	0/0:18,0:18:42.14:0,42,2317	0/0:16,0:16:39.61:0,40,2017	0/0:27,0:27:66.23:0,66,3432	0/0:36,0:36:69.24:0,69,3942	0/0:38,0:38:78.27:0,78,4276	0/0:30,0:31:75.26:0,75,3903	1/1:11,11:21:23.16:863,23,0	1/1:7,13:20:29.89:450,30,0	1/1:36,19:55:15.46:248,15,0	0/0:26,0:26:54.17:0,54,2494	0/0:16,0:16:21.07:0,21,1140	0/0:66,0:67:99:0,144,7653	0/0:20,0:20:33.11:0,33,1912	0/0:29,0:29:63.22:0,63,3263	1/1:11,9:20:24.01:747,24,0	0/0:9,0:11:15.05:0,15,780
chr10	107034591	.	TCTTC	T	798.66	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.611;DP=669;FS=4.051;HRun=0;HaplotypeScore=129.0206;InbreedingCoeff=0.8013;MQ=55.59;MQ0=8;MQRankSum=-6.236;QD=42.03;ReadPosRankSum=-0.644;VQSLOD=4.0180;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:59.23:0,59,1420	0/0:11,0:11:30.96:0,31,510	0/0:41,0:18:30.28:0,30,533	0/0:41,0:13:1.38:0,1,381	0/0:36,0:36:99:0,102,2606	0/0:23,0:23:66.17:0,66,1504	0/0:16,0:16:48.11:0,48,1005	0/0:28,0:28:72.14:0,72,1522	0/0:23,0:23:66.20:0,66,1629	0/0:24,0:24:66.08:0,66,1567	0/0:22,0:22:63.17:0,63,1433	1/1:5,14:19:51.13:893,51,0	0/0:13,0:13:39.03:0,39,784	0/0:7,0:7:18.06:0,18,449	0/0:24,0:24:69.21:0,69,1671	0/0:12,0:11:36.11:0,36,848	0/0:41,0:41:99:0,123,2941	0/0:47,0:47:99:0,134,3159	0/0:14,0:14:41.85:0,42,670	0/0:18,0:17:48.13:0,48,1028	0/0:9,0:9:15.03:0,15,283	0/0:16,0:16:45.13:0,45,1024	0/0:18,0:18:54.14:0,54,1209	0/0:19,0:19:45.75:0,46,1256	0/0:28,0:28:78.25:0,78,1909	0/0:37,0:37:99:0,105,2700	0/0:25,0:25:60.12:0,60,1261	0/0:32,0:32:86.75:0,87,1883
chr10	107034630	.	CTTTT	C	1519.43	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=11.597;DP=709;FS=0.482;HRun=7;HaplotypeScore=148.6515;InbreedingCoeff=0.5123;MQ=52.46;MQ0=6;MQRankSum=-10.702;QD=10.06;ReadPosRankSum=-3.142;VQSLOD=-0.7512;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:69.19:0,69,1574	1/1:9,4:10:17.44:133,17,0	0/0:31,0:11:30.10:0,30,561	0/0:28,0:7:12.48:0,12,182	0/0:32,0:32:96.27:0,96,2257	0/0:18,0:18:51.16:0,51,1235	0/0:20,0:20:57.13:0,57,1196	1/1:40,0:40:60.98:538,61,0	0/0:30,0:30:84.26:0,84,1955	0/0:29,0:29:81.27:0,81,2069	0/0:27,0:27:78.22:0,78,1807	1/1:16,10:24:22.26:644,22,0	0/0:14,0:14:42.12:0,42,972	0/0:7,0:7:18.05:0,18,432	0/0:28,0:28:81.26:0,81,1862	0/0:12,0:11:33.11:0,33,859	0/0:43,0:42:99:0,113,2455	0/0:49,0:49:99:0,135,3258	0/1:18,0:16:15.22:165,0,15	0/1:20,0:19:88.31:88,0,116	0/1:8,0:8:16.26:21,0,16	0/0:18,0:18:48.16:0,48,1161	0/0:21,0:21:54.12:0,54,1126	0/0:25,0:25:64.84:0,65,1296	0/0:28,0:28:84.29:0,84,2118	0/0:40,0:40:88.31:0,88,2766	0/1:26,0:24:92.68:93,0,171	0/0:32,0:32:96.33:0,96,2365
chr10	107034632	.	TTTTTTC	T	2680.25	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=12.295;DP=694;FS=0.997;HRun=0;HaplotypeScore=166.7655;InbreedingCoeff=0.7674;MQ=52.57;MQ0=6;MQRankSum=-11.437;QD=19.14;ReadPosRankSum=-1.696;VQSLOD=3.2080;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:69.24:0,69,2113	0/1:12,0:9:16.46:16,0,69	0/0:31,0:12:33.10:0,33,798	0/0:27,0:7:12.77:0,13,223	0/0:32,0:32:96.27:0,96,2958	0/0:18,0:18:51.18:0,51,1612	0/0:21,0:21:63.20:0,63,1833	1/1:8,25:33:67.97:1327,68,0	0/0:29,0:29:84.28:0,84,2583	0/0:28,0:28:81.28:0,81,2838	0/0:28,0:28:84.29:0,84,2584	0/1:26,0:24:53.92:54,0,68	0/0:14,0:14:42.14:0,42,1435	0/0:7,0:7:18.06:0,18,621	0/0:28,0:28:81.28:0,81,2454	0/0:12,0:11:33.11:0,33,1122	0/0:43,0:42:99:0,111,3428	0/0:48,0:48:99:0,141,4368	1/1:8,9:15:31.49:505,31,0	1/1:17,3:19:27.94:392,28,0	1/1:8,0:8:8.20:100,8,0	0/0:16,0:16:48.16:0,48,1612	0/0:19,0:19:54.19:0,54,1671	0/0:25,0:25:67.10:0,67,1955	0/0:30,0:30:87.30:0,87,2823	0/0:39,0:39:99:0,117,3798	1/1:21,3:23:26.15:464,26,0	0/0:32,0:32:96.33:0,96,3211
chr10	107034638	.	C	CTT	3080.02	PASS	AB=0.769;AC=10;AF=0.179;AN=56;BaseQRankSum=12.972;DP=689;FS=5.366;HRun=7;HaplotypeScore=115.6059;InbreedingCoeff=0.7856;MQ=51.59;MQ0=5;MQRankSum=-12.251;QD=23.33;ReadPosRankSum=-2.977;VQSLOD=1.9220;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:66.17:0,66,929	0/0:11,0:8:3.83:0,4,156	0/0:28,0:11:26.98:0,27,324	0/1:23,0:5:0.11:0,0,85	0/0:31,0:31:84.25:0,84,1237	0/0:19,0:19:50.83:0,51,675	0/0:23,0:23:66.17:0,66,919	1/1:36,0:36:37.82:864,38,0	0/0:28,0:28:75.19:0,75,1049	0/0:30,0:30:87.28:0,87,1297	0/0:31,0:31:75.24:0,75,1121	0/0:27,0:25:45.25:0,45,405	0/0:14,0:14:42.14:0,42,641	0/0:7,0:7:18.06:0,18,275	0/0:26,0:26:75.19:0,75,1039	0/0:11,0:11:30.09:0,30,438	0/0:40,0:39:99:0,104,1463	0/0:45,0:45:99:0,134,1864	1/1:14,3:15:42.04:543,42,0	1/1:11,14:23:52.68:778,53,0	0/1:1,6:7:11.06:85,0,11	0/0:16,0:16:48.16:0,48,730	0/0:19,0:19:54.14:0,54,760	0/0:25,0:25:58.20:0,58,948	0/0:28,0:28:81.22:0,81,1171	0/0:40,0:40:99:0,120,1735	1/1:5,19:22:57.15:972,57,0	0/0:32,0:32:86.66:0,87,1338
chr10	107034654	.	CTCTT	C	592.81	PASS	AB=0.914;AC=8;AF=0.154;AN=52;BaseQRankSum=4.539;DP=644;FS=0.870;HRun=0;HaplotypeScore=134.0002;InbreedingCoeff=0.1466;MQ=51.28;MQ0=9;MQRankSum=0.901;QD=3.04;ReadPosRankSum=1.208;VQSLOD=2.2451;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,11:29:7.02:254,0,7	0/0:9,0:6:3.01:0,3,39	./.	./.	0/0:24,0:24:15.05:0,15,348	0/0:12,0:19:6.02:0,6,104	0/0:24,0:24:24:0,24,379	0/0:35,0:33:0:0,0,0	1/1:14,10:24:24.08:366,24,0	0/0:30,0:30:33.10:0,33,661	0/0:27,0:27:39.13:0,39,907	0/0:24,0:22:16.81:0,17,166	0/0:18,0:18:24.08:0,24,521	0/0:14,0:14:30.10:0,30,649	0/0:23,0:23:33.10:0,33,708	0/0:12,0:12:9.02:0,9,163	0/0:34,4:38:11.42:0,11,1161	0/1:39,2:41:50.25:50,0,576	0/0:17,0:14:6.02:0,6,92	0/0:27,0:25:19.29:0,19,182	0/0:3,0:3:1.25:0,1,3	0/1:17,1:18:15.68:16,0,562	0/1:19,1:19:21.70:22,0,434	0/1:24,3:27:9.78:10,0,611	0/0:23,0:23:27.09:0,27,610	0/1:35,0:34:6.56:7,0,755	0/0:23,0:21:29.95:0,30,365	0/0:30,0:30:36.12:0,36,830
chr10	107036023	.	TTG	T	777.62	PASS	AB=0.857;AC=17;AF=0.315;AN=54;BaseQRankSum=4.918;DP=442;FS=3.697;HRun=0;HaplotypeScore=65.7772;InbreedingCoeff=0.2134;MQ=60.21;MQ0=16;MQRankSum=-2.346;QD=5.76;ReadPosRankSum=-1.628;VQSLOD=2.5550;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:38:45.45:0,45,1117	0/1:2,1:3:8.94:9,0,42	0/0:31,0:7:6.02:0,6,66	0/0:33,0:8:8.98:0,9,92	0/0:9,0:8:15.05:0,15,239	0/0:7,0:7:4.50:0,4,111	0/0:18,0:20:36.86:0,37,691	0/1:14,2:15:6.84:233,0,7	0/1:5,1:6:17.69:18,0,203	0/1:18,2:20:37.96:38,0,357	./.	1/1:7,4:11:11.92:139,12,0	0/0:3,0:3:9.03:0,9,143	0/0:9,0:9:17.27:0,17,244	0/0:3,0:4:3.01:0,3,48	0/0:5,0:5:9.03:0,9,142	0/0:37,1:38:19.75:0,20,1249	0/0:39,1:42:49.40:0,49,1387	1/1:10,2:12:4.15:86,4,0	1/1:7,3:10:4.88:17,5,0	1/1:12,1:12:2.74:12,3,0	0/1:13,3:15:68.18:68,0,427	0/0:4,0:4:9.01:0,9,102	0/0:39,1:40:22.92:0,23,1049	0/1:9,0:9:53.12:53,0,173	0/0:19,0:19:0.58:0,1,466	1/1:11,5:16:29.37:238,29,0	0/1:2,1:3:28.29:28,0,42
chr10	107036040	.	T	TGTGC	1542.34	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=3.851;DP=425;FS=8.079;HRun=0;HaplotypeScore=81.7621;InbreedingCoeff=0.7966;MQ=52.57;MQ0=17;MQRankSum=-6.456;QD=18.15;ReadPosRankSum=-3.679;VQSLOD=1.4659;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:84.16:0,84,1359	1/1:4,0:4:2.25:13,2,0	0/0:26,0:4:6.01:0,6,112	0/0:34,0:5:10.45:0,10,104	0/0:8,0:7:18.04:0,18,289	0/0:7,0:7:15.01:0,15,212	0/0:24,0:24:63.12:0,63,941	1/1:7,12:20:36.23:552,36,0	0/0:6,0:6:18.05:0,18,298	0/0:16,0:15:20.50:0,21,487	./.	1/1:11,2:13:14.90:226,15,0	0/0:5,0:4:9.03:0,9,170	0/0:8,0:8:20.28:0,20,314	0/0:3,0:3:3.01:0,3,57	0/0:4,0:4:12.02:0,12,185	0/0:34,0:33:58.50:0,59,1562	0/0:43,0:42:99:0,111,1838	1/1:10,0:11:25.69:238,26,0	1/1:3,3:6:5.91:76,6,0	1/1:12,1:12:2.74:12,3,0	0/0:16,0:15:39.09:0,39,609	0/0:4,0:4:9.01:0,9,111	0/0:39,0:39:99:0,99,1523	0/0:8,0:8:21.04:0,21,298	0/0:16,0:16:39.12:0,39,620	1/1:11,4:16:38.45:597,38,0	0/0:2,0:2:6.01:0,6,84
chr10	107036052	.	C	CGT	797.48	PASS	AB=0.884;AC=11;AF=0.204;AN=54;BaseQRankSum=7.519;DP=377;FS=0.000;HRun=0;HaplotypeScore=71.4014;InbreedingCoeff=0.5203;MQ=50.26;MQ0=15;MQRankSum=-5.387;QD=8.58;ReadPosRankSum=-2.046;VQSLOD=2.8574;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.15:0,60,800	1/1:3,0:3:3.01:46,3,0	0/0:17,0:4:9.03:0,9,116	0/0:26,0:5:9.02:0,9,114	0/0:5,0:5:12.04:0,12,172	0/0:8,0:8:18.05:0,18,236	0/0:23,0:23:66.22:0,66,942	0/1:14,2:15:17.01:173,0,17	0/0:8,0:8:24.08:0,24,336	0/0:10,0:9:23.95:0,24,312	./.	1/1:9,3:12:8.62:79,9,0	0/0:5,0:4:9.03:0,9,129	0/0:6,0:6:18.06:0,18,258	0/0:2,0:2:3.01:0,3,43	0/0:4,0:4:9.03:0,9,129	0/0:32,0:31:87.28:0,87,1210	0/0:41,0:39:99:0,111,1521	0/1:12,4:15:59.84:193,0,60	1/1:3,3:6:5.74:37,6,0	0/1:25,1:23:0.06:0,0,0	0/0:14,0:14:36.09:0,36,475	0/0:1,0:1:3.01:0,3,43	0/0:37,0:37:97.82:0,98,1330	0/0:7,0:7:18.06:0,18,256	0/0:11,0:10:27.07:0,27,384	1/1:11,3:14:35.39:415,35,0	0/0:3,0:3:6.02:0,6,86
chr10	107036074	.	TGC	T	47.63	PASS	AB=0.870;AC=6;AF=0.120;AN=50;BaseQRankSum=5.761;DP=334;FS=6.010;HRun=0;HaplotypeScore=61.5193;InbreedingCoeff=0.1611;MQ=49.77;MQ0=11;MQRankSum=-4.315;QD=0.58;ReadPosRankSum=0.918;VQSLOD=0.5551;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:48.13:0,48,843	./.	0/0:7,0:2:3.01:0,3,56	0/0:9,0:2:3.01:0,3,41	0/0:4,0:4:9:0,9,120	0/0:11,0:11:24.08:0,24,441	0/0:26,0:26:69.23:0,69,1238	0/1:9,2:10:58.43:58,0,98	0/0:12,0:12:30.10:0,30,525	0/0:6,0:6:15.05:0,15,264	./.	1/1:8,0:8:4.83:35,5,0	0/0:7,0:6:12.04:0,12,199	0/0:7,0:7:21.02:0,21,284	0/0:2,0:2:3.01:0,3,58	0/0:6,0:6:18.06:0,18,332	0/0:23,0:22:63.17:0,63,1142	0/0:41,0:39:99:0,111,2034	0/1:15,1:15:35.74:36,0,149	0/0:4,0:4:3:0,3,29	0/1:31,6:32:0.02:0,0,0	0/0:7,0:7:15.05:0,15,273	./.	0/0:35,0:35:91.50:0,91,1770	0/0:8,0:8:24.08:0,24,417	0/0:12,0:11:25.30:0,25,521	0/1:8,2:10:27.49:27,0,45	0/0:4,0:4:6:0,6,82
chr10	107036100	.	TGC	T	219.33	PASS	AB=0.833;AC=6;AF=0.120;AN=50;BaseQRankSum=5.480;DP=318;FS=1.174;HRun=0;HaplotypeScore=62.4189;InbreedingCoeff=0.2984;MQ=51.29;MQ0=9;MQRankSum=-3.766;QD=3.48;ReadPosRankSum=-2.919;VQSLOD=0.5651;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:45.11:0,45,765	./.	./.	0/0:4,0:2:3.01:0,3,43	0/0:1,0:1:3.01:0,3,58	0/0:14,0:14:33.11:0,33,592	0/0:32,0:32:87.21:0,87,1546	0/1:6,3:8:31.64:142,0,32	0/0:15,0:15:32.89:0,33,633	0/0:8,0:7:18.06:0,18,330	0/0:1,0:1:3.01:0,3,58	1/1:13,0:13:5.89:40,6,0	0/0:4,0:4:12.04:0,12,232	0/0:9,0:9:18.06:0,18,332	0/0:3,0:3:6.02:0,6,95	0/0:10,0:10:27.09:0,27,519	0/0:21,0:20:40.29:0,40,961	0/0:37,0:36:96.80:0,97,1745	0/1:10,1:10:71.38:84,0,71	./.	1/1:23,7:24:6.65:69,7,0	0/0:4,0:4:9.03:0,9,173	0/0:3,0:3:6.02:0,6,116	0/0:40,0:40:99:0,114,2104	0/0:8,0:8:24.07:0,24,413	0/0:7,0:7:20.99:0,21,281	0/0:6,1:7:0.48:0,0,112	0/0:2,0:2:6.02:0,6,116
chr10	107036102	.	C	CGT	375.87	PASS	AB=0.871;AC=8;AF=0.160;AN=50;BaseQRankSum=5.063;DP=332;FS=0.000;HRun=0;HaplotypeScore=67.4279;InbreedingCoeff=0.4498;MQ=51.51;MQ0=10;MQRankSum=-4.812;QD=5.22;ReadPosRankSum=-3.734;VQSLOD=1.2616;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:45.08:0,45,572	./.	./.	0/0:4,0:3:3.01:0,3,40	0/0:1,0:1:3.01:0,3,43	0/0:14,0:14:33.11:0,33,450	0/0:32,0:32:81.25:0,81,1137	1/1:7,1:7:11.72:194,12,0	0/0:14,0:14:33.11:0,33,467	0/0:8,0:7:18.06:0,18,256	0/0:2,0:2:3.01:0,3,43	1/1:9,0:12:6.45:69,6,0	0/0:5,0:5:12.04:0,12,170	0/0:10,0:10:18.04:0,18,239	0/0:3,0:3:3.01:0,3,43	0/0:10,0:10:27.09:0,27,387	0/0:23,0:22:45.54:0,46,743	0/0:37,0:36:93.72:0,94,1280	0/1:11,2:12:90.09:141,0,90	./.	1/1:30,2:25:9.83:94,10,0	0/0:4,0:4:9.03:0,9,129	0/0:4,0:4:6.02:0,6,86	0/0:41,0:41:99:0,111,1537	0/0:8,0:8:21.06:0,21,283	0/0:8,0:8:11.12:0,11,169	0/1:6,1:7:9.61:10,0,129	0/0:2,0:2:6.02:0,6,86
chr10	107036104	.	T	TGC	149.73	PASS	AB=1.000;AC=6;AF=0.115;AN=52;BaseQRankSum=5.581;DP=329;FS=0.000;HRun=0;HaplotypeScore=67.8661;InbreedingCoeff=0.3917;MQ=50.96;MQ0=11;MQRankSum=-5.110;QD=2.23;ReadPosRankSum=-1.005;VQSLOD=1.1219;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:48.10:0,48,640	0/0:2,0:2:0:0,0,0	./.	0/0:6,0:3:3.01:0,3,43	0/0:1,0:1:3.01:0,3,43	0/0:14,0:14:33.09:0,33,453	0/0:31,0:31:84.24:0,84,1162	1/1:7,0:6:11.71:119,12,0	0/0:14,0:14:33.11:0,33,472	0/0:8,0:7:18.05:0,18,242	0/0:2,0:2:6.01:0,6,68	1/1:8,4:12:8.94:118,9,0	0/0:5,0:5:15.04:0,15,197	0/0:10,0:10:18.05:0,18,240	0/0:4,0:4:3.01:0,3,43	0/0:11,0:11:27.09:0,27,387	0/0:22,0:22:47.32:0,47,780	0/0:36,0:35:95.95:0,96,1260	0/1:14,0:13:21.21:21,0,104	./.	0/1:33,0:24:12.73:13,0,14	0/0:4,0:4:9.03:0,9,129	0/0:4,0:4:9.02:0,9,111	0/0:39,0:39:99:0,111,1528	0/0:7,0:7:21.07:0,21,300	0/0:7,0:7:14.12:0,14,197	0/0:7,0:7:3.52:0,4,121	0/0:2,0:2:6.02:0,6,86
chr10	107036114	.	CGT	C	530.13	PASS	AB=0.847;AC=13;AF=0.241;AN=54;BaseQRankSum=6.378;DP=397;FS=3.073;HRun=0;HaplotypeScore=63.6938;InbreedingCoeff=0.2050;MQ=53.43;MQ0=12;MQRankSum=-0.542;QD=3.33;ReadPosRankSum=-1.547;VQSLOD=1.8391;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,3:28:12.55:13,0,764	0/0:4,0:4:6.02:0,6,82	./.	0/0:12,0:6:12.68:0,13,163	0/0:2,0:2:2.94:0,3,18	0/0:14,0:14:27.09:0,27,421	0/0:29,3:32:32.84:0,33,999	1/1:4,6:9:10.59:200,11,0	0/0:14,0:15:39.11:0,39,567	0/0:13,0:11:21.07:0,21,306	0/0:3,0:3:9.02:0,9,117	0/0:11,0:11:12.02:0,12,140	0/0:7,0:7:21.07:0,21,321	0/0:11,0:11:24.05:0,24,319	0/0:3,0:3:6.02:0,6,92	0/1:12,1:13:3.14:3,0,418	0/1:27,5:31:67.27:67,0,910	0/0:38,0:38:87.21:0,87,1270	0/1:9,3:10:5.96:58,0,6	1/1:0,3:3:6.02:73,6,0	1/1:22,14:27:6.01:171,6,0	0/1:5,1:6:23.92:24,0,103	0/0:6,1:7:11.13:0,11,217	0/0:46,1:47:68.87:0,69,1461	0/0:10,0:10:24.04:0,24,331	0/1:9,2:11:42.05:42,0,311	0/1:5,3:8:32.03:32,0,39	0/0:4,0:4:9.03:0,9,137
chr10	107036824	.	C	CG	996.11	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.515;DP=585;FS=2.623;HRun=3;HaplotypeScore=62.2156;InbreedingCoeff=0.9884;MQ=85.92;MQ0=0;MQRankSum=-2.116;QD=32.13;ReadPosRankSum=2.063;VQSLOD=3.8886;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1402	0/0:9,0:9:27.08:0,27,323	0/0:21,0:20:54.12:0,54,621	0/0:17,0:17:45.06:0,45,498	0/0:16,0:16:48.12:0,48,553	0/0:17,0:17:48.15:0,48,575	0/0:16,0:16:48.14:0,48,566	0/0:34,0:34:90.27:0,90,1079	0/0:17,0:17:51.16:0,51,611	0/0:19,0:19:45.10:0,45,517	0/0:9,0:9:24.07:0,24,288	1/1:1,30:31:78.26:1091,78,0	0/0:7,0:7:18.06:0,18,216	0/0:24,0:24:60.18:0,60,719	0/0:15,0:15:45.14:0,45,539	0/0:18,0:18:51.11:0,51,575	0/0:22,0:22:63.15:0,63,728	0/0:25,0:24:72.18:0,72,838	0/0:16,0:16:42.06:0,42,466	0/0:18,0:18:50.95:0,51,588	0/0:45,0:45:99:0,129,1498	0/0:16,0:16:44.90:0,45,497	0/0:14,0:14:39.11:0,39,456	0/0:42,0:42:99:0,117,1393	0/0:25,0:25:66.15:0,66,765	0/0:21,0:21:60.09:0,60,677	0/0:17,0:17:48.12:0,48,553	0/0:12,0:11:30.09:0,30,359
chr10	107038375	.	AGGCTGCT	A	6642.03	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.533;DP=686;FS=1.907;HRun=0;HaplotypeScore=161.2643;InbreedingCoeff=0.9988;MQ=89.44;MQ0=0;MQRankSum=-12.827;QD=59.30;ReadPosRankSum=-3.382;VQSLOD=4.2911;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,5112	0/0:11,0:11:30.10:0,30,1122	0/0:28,0:28:76.67:0,77,2833	0/0:28,0:28:84.28:0,84,2870	0/0:7,0:7:21.07:0,21,822	0/0:15,0:15:45.15:0,45,1739	0/0:30,0:30:87.30:0,87,3418	1/1:5,27:32:81.23:1918,81,0	0/0:19,0:19:57.20:0,57,2221	0/0:28,0:28:84.29:0,84,3362	0/0:14,0:14:42.14:0,42,1615	0/0:31,0:31:93.32:0,93,3722	0/0:24,0:24:69.22:0,69,2663	0/0:33,0:33:96.33:0,96,3797	0/0:38,0:38:99:0,111,4351	0/0:35,0:35:99:0,105,4145	0/0:33,0:33:99:0,99,3982	0/0:43,0:43:99:0,129,5158	1/1:4,15:19:42.14:1107,42,0	1/1:0,11:11:33.07:770,33,0	1/1:4,28:32:66.70:1739,67,0	0/0:16,0:16:48.16:0,48,1888	0/0:14,0:14:39.13:0,39,1476	0/0:36,0:36:99:0,105,4241	0/0:15,0:15:45.15:0,45,1817	0/0:21,0:21:60.21:0,60,2355	1/1:3,15:18:42.14:1107,42,0	0/0:12,0:12:33.10:0,33,1124
chr10	107039706	.	C	CG	263.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.196;DP=614;FS=21.116;HRun=4;HaplotypeScore=61.3767;InbreedingCoeff=0.9963;MQ=83.27;MQ0=0;MQRankSum=-1.082;QD=23.95;ReadPosRankSum=-1.664;VQSLOD=1.6773;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,153,1706	1/1:0,11:11:27.09:358,27,0	0/0:18,0:18:45.12:0,45,498	0/0:19,0:19:48.13:0,48,537	0/0:16,0:16:45.13:0,45,510	0/0:25,0:25:69.09:0,69,762	0/0:27,0:27:69.19:0,69,782	0/0:23,0:23:63.18:0,63,713	0/0:18,0:18:54.15:0,54,611	0/0:16,0:16:39.11:0,39,439	0/0:15,0:15:39.11:0,39,441	0/0:19,0:19:45.13:0,45,510	0/0:19,0:19:43:0,43,558	0/0:22,0:22:66.16:0,66,727	0/0:20,0:20:54.14:0,54,603	0/0:15,0:15:42.12:0,42,476	0/0:41,0:41:99:0,117,1291	0/0:29,0:29:81.22:0,81,907	0/0:27,0:27:75.66:0,76,837	0/0:9,0:9:24.07:0,24,272	0/0:47,0:47:99:0,129,1444	0/0:18,0:18:51.10:0,51,563	0/0:18,0:18:45.13:0,45,509	0/0:22,0:22:57.12:0,57,631	0/0:18,0:18:51.14:0,51,576	0/0:20,0:20:57.14:0,57,627	0/0:14,0:13:36.10:0,36,408	0/0:12,0:12:33.09:0,33,374
chr10	107043260	.	CTG	C	964.27	PASS	AB=0.917;AC=10;AF=0.179;AN=56;BaseQRankSum=9.200;DP=1005;FS=0.463;HRun=0;HaplotypeScore=131.0678;InbreedingCoeff=0.0318;MQ=61.14;MQ0=18;MQRankSum=0.279;QD=3.60;ReadPosRankSum=1.506;VQSLOD=2.2553;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:58,1:59:99:0,102,1825	0/1:18,1:19:8.17:8,0,651	0/0:54,0:27:39.04:0,39,473	0/0:59,0:26:24.43:0,24,317	0/0:22,2:24:12.62:0,13,662	0/1:18,2:19:22.92:23,0,596	0/0:30,1:31:30.57:0,31,892	0/0:47,1:47:18.86:0,19,1040	0/1:44,4:48:30.89:31,0,1381	0/1:37,4:41:25.38:25,0,930	0/0:20,2:22:12.28:0,12,573	1/1:11,29:40:75.23:889,75,0	0/0:37,0:37:41.07:0,41,1116	0/0:40,5:44:25.22:0,25,1326	0/0:48,1:48:66.07:0,66,1523	0/1:28,2:31:4.90:5,0,834	0/0:36,0:36:68.33:0,68,1102	0/1:17,2:19:50.77:51,0,481	0/0:15,0:11:18:0,18,218	0/0:25,0:25:9.69:0,10,599	0/0:74,7:81:37.15:0,37,2155	0/0:34,0:34:18.27:0,18,1025	0/0:22,2:24:24.55:0,25,765	0/0:39,1:40:57.78:0,58,1373	0/0:29,0:28:66.20:0,66,994	0/1:33,3:36:31.46:31,0,873	0/0:24,1:25:27.69:0,28,915	0/1:12,2:14:47.84:48,0,394
chr10	107043340	.	A	ATGTGTT	2273.95	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.181;DP=914;FS=6.133;HRun=0;HaplotypeScore=203.7037;InbreedingCoeff=0.9959;MQ=62.61;MQ0=3;MQRankSum=-5.519;QD=52.88;ReadPosRankSum=-0.627;VQSLOD=2.8399;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,142,3045	1/1:4,0:18:18.12:363,18,0	0/0:34,0:24:44.26:0,44,851	0/0:38,0:28:63.11:0,63,1117	0/0:32,0:32:87.13:0,87,1872	0/0:18,0:18:51.11:0,51,991	0/0:20,0:20:54.11:0,54,962	0/0:49,0:49:99:0,138,2608	0/0:34,0:34:96.76:0,97,2010	0/0:50,0:50:99:0,132,2754	0/0:29,0:29:78.21:0,78,1621	1/1:7,18:25:69.18:2031,69,0	0/0:23,0:23:69.18:0,69,1383	0/0:23,0:23:69.14:0,69,1297	0/0:43,0:44:99:0,120,2367	0/0:24,0:24:69.22:0,69,1526	0/0:28,0:28:76.10:0,76,1519	0/0:28,0:28:66.73:0,67,1512	0/0:28,0:28:79.64:0,80,1263	0/0:25,0:25:75.24:0,75,1654	0/0:69,0:69:99:0,192,3799	0/0:30,0:29:84.26:0,84,1787	0/0:25,0:25:54.06:0,54,1091	0/0:44,0:44:99:0,114,2331	0/0:37,0:37:87.25:0,87,1816	0/0:36,0:36:96.21:0,96,1811	0/0:29,0:29:78.18:0,78,1586	0/0:17,0:17:51.17:0,51,1129
chr10	107043536	.	ATCTCTCTGTGTG	A	407.15	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.127;DP=942;FS=8.789;HRun=0;HaplotypeScore=338.6548;InbreedingCoeff=0.9896;MQ=64.65;MQ0=2;MQRankSum=-2.455;QD=25.45;ReadPosRankSum=-0.083;VQSLOD=0.7885;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,132,6402	0/0:11,0:11:24.08:0,24,900	0/0:40,0:31:68.97:0,69,2371	0/0:46,0:37:53.34:0,53,1603	0/0:37,0:37:90.27:0,90,4025	0/0:27,0:27:69.24:0,69,3548	0/0:40,0:40:99:0,108,4754	0/0:42,0:42:99:0,102,3399	0/0:31,0:31:72.25:0,72,3304	0/0:35,0:35:93.32:0,93,4589	0/0:24,0:24:54.19:0,54,2544	1/1:6,10:16:18.05:498,18,0	0/0:45,0:45:99:0,123,5931	0/0:28,0:28:75.26:0,75,3842	0/0:38,0:38:99:0,99,4698	0/0:32,0:32:72.23:0,72,3055	0/0:39,0:39:99:0,108,5087	0/0:22,0:21:63.22:0,63,3127	0/0:18,0:17:39.10:0,39,1522	0/0:37,0:37:81.28:0,81,3731	0/0:56,0:56:99:0,102,5121	0/0:36,0:36:93.32:0,93,4391	0/0:26,0:26:69.24:0,69,2919	0/0:58,0:58:99:0,154,7883	0/0:21,0:21:57.20:0,57,2494	0/0:42,0:42:99:0,105,5109	0/0:25,0:25:69.24:0,69,3411	0/0:11,0:11:33.11:0,33,1878
chr10	107043568	.	CTCTG	C	109.63	PASS	AB=0.955;AC=3;AF=0.054;AN=56;BaseQRankSum=4.256;DP=940;FS=2.500;HRun=0;HaplotypeScore=188.3568;InbreedingCoeff=0.5978;MQ=55.98;MQ0=11;MQRankSum=0.406;QD=3.43;ReadPosRankSum=1.221;VQSLOD=2.8226;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,105,2354	1/1:11,0:11:17.78:198,18,0	0/0:33,0:19:11.97:0,12,230	0/0:54,0:22:21.04:0,21,355	0/0:29,0:29:57.17:0,57,1293	0/0:30,1:31:20.11:0,20,1463	0/0:41,1:42:72.25:0,72,1709	0/0:38,0:38:59.76:0,60,656	0/0:30,0:30:78.23:0,78,1735	0/0:34,1:36:17.07:0,17,1286	0/1:20,1:21:10.06:10,0,715	0/0:18,0:18:13.21:0,13,131	0/0:42,0:42:73.28:0,73,1753	0/0:32,0:32:69.21:0,69,1558	0/0:34,0:34:66.23:0,66,1506	0/0:28,0:28:69.22:0,69,1568	0/0:48,0:48:99:0,105,2449	0/0:26,0:25:54.90:0,55,1092	0/0:13,0:11:26.96:0,27,259	0/0:34,0:33:8.22:0,8,79	0/0:53,0:53:50.67:0,51,508	0/0:29,0:29:69.22:0,69,1565	0/0:29,0:29:57.20:0,57,1362	0/0:69,0:69:98.38:0,98,3316	0/0:19,0:19:42.14:0,42,991	0/0:36,1:37:29.07:0,29,1635	0/0:31,0:31:46.90:0,47,424	0/0:13,0:13:39.13:0,39,854
chr10	107043588	.	GTC	G	108.92	PASS	AB=0.981;AC=4;AF=0.071;AN=56;BaseQRankSum=8.183;DP=946;FS=8.246;HRun=0;HaplotypeScore=151.0888;InbreedingCoeff=0.4679;MQ=52.80;MQ0=21;MQRankSum=-1.898;QD=1.28;ReadPosRankSum=-2.051;VQSLOD=1.6813;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,144,2484	1/1:6,4:10:19.27:196,19,0	0/0:32,0:11:29.89:0,30,425	0/0:47,1:17:45.12:0,45,666	0/0:27,0:27:75.25:0,75,1343	0/0:31,0:31:83.17:0,83,1500	0/0:41,0:41:99:0,108,1891	0/1:48,2:50:9.97:10,0,1050	0/0:35,0:35:99:0,105,1900	0/0:29,0:29:79.59:0,80,1440	0/0:20,0:20:47.01:0,47,872	0/0:25,0:24:13.02:0,13,159	0/0:35,0:35:99:0,102,1764	0/0:29,0:29:84.25:0,84,1479	0/0:33,0:33:90.26:0,90,1531	0/0:28,0:28:84.29:0,84,1506	0/0:49,0:49:99:0,121,2281	0/0:31,0:30:79.77:0,80,1311	0/0:16,0:15:33.01:0,33,312	0/1:25,0:24:10.36:10,0,78	0/0:51,0:51:12.64:0,13,548	0/0:31,0:31:86.39:0,86,1496	0/0:28,0:28:69.24:0,69,1272	0/0:76,0:76:99:0,201,3629	0/0:21,0:21:57.12:0,57,956	0/0:44,0:43:99:0,122,2203	0/0:29,0:29:43.65:0,44,500	0/0:15,0:15:42.12:0,42,738
chr10	107043594	.	C	CTGTGTGTGTG	2116.92	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.412;DP=955;FS=26.003;HRun=0;HaplotypeScore=291.5064;InbreedingCoeff=0.9200;MQ=52.99;MQ0=21;MQRankSum=-9.443;QD=12.17;ReadPosRankSum=-6.221;VQSLOD=0.5873;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,143,3497	0/0:11,0:11:7.55:0,8,91	0/0:35,0:15:12.40:0,12,349	0/0:45,0:20:46.75:0,47,632	0/0:30,0:30:80.72:0,81,1563	0/0:30,0:30:84.11:0,84,2034	0/0:40,0:40:99:0,108,2396	1/1:48,0:48:99:973,100,0	0/0:37,0:37:99:0,108,2813	0/0:29,0:29:75.63:0,76,1677	0/0:18,0:18:45.15:0,45,1213	0/0:23,0:22:10.16:0,10,73	0/0:35,0:35:77.69:0,78,2089	0/0:32,0:32:87.23:0,87,1982	0/0:31,0:31:81.23:0,81,1973	0/0:31,0:31:90.21:0,90,2268	0/0:51,0:52:99:0,145,3361	0/0:29,0:28:14.92:0,15,1580	1/1:17,0:16:36.76:367,37,0	1/1:2,20:27:3.01:73,3,0	1/1:53,0:53:40.41:430,40,0	0/0:29,0:29:79.08:0,79,1719	0/0:29,0:29:55.94:0,56,1703	0/0:76,0:76:99:0,207,5220	0/0:20,0:20:54.06:0,54,1222	0/0:45,0:44:99:0,126,2823	1/1:29,0:29:49.57:441,50,0	0/0:15,0:15:38.73:0,39,527
chr10	107044363	.	ACACT	A	1943.96	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.972;DP=1144;FS=10.634;HRun=0;HaplotypeScore=197.7263;InbreedingCoeff=0.9987;MQ=60.21;MQ0=4;MQRankSum=-1.163;QD=34.10;ReadPosRankSum=-0.392;VQSLOD=2.8601;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,103,2600	0/0:15,0:15:45.13:0,45,988	0/0:49,0:33:91.44:0,91,1843	0/0:61,0:38:40.95:0,41,1748	0/0:35,0:35:99:0,105,2355	0/0:30,0:30:90.26:0,90,2142	0/0:36,0:36:99:0,99,2292	0/0:46,0:44:99:0,117,2828	0/0:57,0:56:99:0,165,3961	0/0:43,0:43:99:0,126,3070	0/0:16,0:16:26.06:0,26,1033	1/1:4,53:57:99:2039,114,0	0/0:43,0:43:99:0,123,3094	0/0:44,0:44:99:0,129,3101	0/0:47,0:47:99:0,138,3435	0/0:41,0:41:99:0,123,3054	0/0:41,0:41:99:0,102,2857	0/0:29,0:29:76.45:0,76,1841	0/0:23,0:21:57.15:0,57,1278	0/0:44,0:44:99:0,132,3350	0/0:92,0:91:99:0,262,6537	0/0:44,0:44:99:0,123,3237	0/0:31,0:31:87.31:0,87,2147	0/0:67,0:67:99:0,115,3912	0/0:24,0:24:66.22:0,66,1640	0/0:42,0:42:99:0,117,2850	0/0:25,0:25:72.20:0,72,1659	0/0:20,0:20:60.21:0,60,1536
chr10	107044365	.	ACT	A	655.60	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=11.448;DP=1135;FS=14.632;HRun=0;HaplotypeScore=156.7182;InbreedingCoeff=0.9980;MQ=60.29;MQ0=4;MQRankSum=-2.785;QD=11.92;ReadPosRankSum=-0.761;VQSLOD=2.3828;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,103,1874	0/0:15,0:15:45.12:0,45,734	0/0:48,0:34:94.69:0,95,1350	0/0:60,0:37:42.65:0,43,1241	0/0:35,0:35:99:0,105,1727	0/0:32,0:32:96.20:0,96,1602	0/0:37,0:37:99:0,105,1694	0/0:48,0:46:99:0,107,2090	0/0:57,0:56:99:0,165,2881	0/0:43,0:43:99:0,126,2245	0/0:15,0:15:24.32:0,24,754	1/1:55,0:55:99:750,113,0	0/0:41,0:41:99:0,123,2214	0/0:42,0:43:99:0,112,2247	0/0:48,0:48:99:0,141,2490	0/0:41,0:41:99:0,123,2221	0/0:41,0:41:99:0,105,2095	0/0:27,2:29:60.23:0,60,1323	0/0:22,0:20:56.91:0,57,910	0/0:45,0:45:99:0,135,2440	0/0:94,0:93:99:0,268,4762	0/0:41,0:41:99:0,123,2257	0/0:30,0:30:87.71:0,88,1507	0/0:62,2:65:99:0,142,2849	0/0:24,0:24:66.19:0,66,1167	0/0:41,0:41:99:0,120,2094	0/0:24,0:24:72.17:0,72,1196	0/0:20,0:20:60.21:0,60,1131
chr10	107044441	.	T	TCA	2274.34	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.074;DP=1256;FS=11.724;HRun=0;HaplotypeScore=193.6838;InbreedingCoeff=0.9998;MQ=56.79;MQ0=14;MQRankSum=1.751;QD=33.95;ReadPosRankSum=-0.393;VQSLOD=3.5605;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:77.28:0,77,985	0/0:17,0:17:39.06:0,39,476	0/0:36,0:20:46.05:0,46,477	0/0:48,0:25:41.22:0,41,442	0/0:36,0:36:99:0,99,1207	0/0:32,0:32:78.25:0,78,978	0/0:37,0:37:84.26:0,84,1046	0/0:69,0:64:99:0,150,1855	0/0:55,0:55:99:0,132,1631	0/0:58,0:58:99:0,147,1823	0/0:21,0:21:51.16:0,51,642	1/1:20,47:64:99:2369,112,0	0/0:43,0:43:99:0,115,1445	0/0:55,0:55:99:0,150,1850	0/0:58,0:58:99:0,135,1658	0/0:41,0:41:99:0,99,1234	0/0:26,0:26:63.17:0,63,774	0/0:39,0:40:78.18:0,78,1054	0/0:27,0:21:42.13:0,42,527	0/0:48,0:48:99:0,120,1497	0/0:108,0:107:99:0,153,1906	0/0:59,0:59:99:0,153,1945	0/0:29,0:29:78.25:0,78,983	0/0:70,0:70:99:0,157,1970	0/0:30,0:30:66.20:0,66,816	0/0:46,0:47:99:0,120,1475	0/0:29,0:29:75.24:0,75,946	0/0:26,0:26:66.21:0,66,832
chr10	107044524	.	TAC	T	304.52	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.726;DP=1186;FS=7.957;HRun=0;HaplotypeScore=193.0622;InbreedingCoeff=0.8142;MQ=53.61;MQ0=15;MQRankSum=-2.213;QD=9.82;ReadPosRankSum=-2.711;VQSLOD=2.2408;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:96.31:0,96,1596	0/0:12,0:12:11.16:0,11,540	0/0:31,1:6:12.04:0,12,204	0/0:20,0:5:3.85:0,4,147	0/0:34,0:34:90.20:0,90,1466	0/0:29,0:29:78.24:0,78,1288	0/0:48,0:48:99:0,123,2059	0/0:60,0:54:99:0,120,1882	0/0:74,0:74:99:0,193,3189	0/0:70,0:69:99:0,180,3036	0/0:26,0:26:63.20:0,63,1047	1/1:8,23:30:35.08:399,35,0	0/0:56,0:56:99:0,160,2675	0/0:54,0:54:99:0,141,2372	0/0:55,0:55:99:0,160,2680	0/0:58,0:57:99:0,144,2346	0/0:45,0:46:99:0,108,1927	0/0:40,1:40:30.23:0,30,1346	0/0:21,0:19:40.69:0,41,632	0/0:32,0:32:20.73:0,21,300	0/0:70,4:75:50.67:0,51,803	0/0:41,0:41:99:0,114,1848	0/0:29,0:29:78.27:0,78,1328	0/0:64,0:64:99:0,147,2429	0/0:35,0:35:90.29:0,90,1504	0/0:52,0:51:99:0,132,2238	0/0:26,0:26:38.66:0,39,577	0/0:16,0:16:35.89:0,36,551
chr10	107044542	.	T	TAC	1506.59	PASS	AB=0.750;AC=13;AF=0.232;AN=56;BaseQRankSum=12.020;DP=1175;FS=26.661;HRun=0;HaplotypeScore=203.7555;InbreedingCoeff=0.7865;MQ=53.28;MQ0=15;MQRankSum=-9.053;QD=5.58;ReadPosRankSum=-6.814;VQSLOD=0.2136;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,108,1360	0/1:10,5:14:18.58:369,0,19	0/0:48,0:11:21.02:0,21,236	0/0:28,0:7:17.62:0,18,177	0/0:31,0:31:69.15:0,69,825	0/0:28,0:28:72.21:0,72,885	0/0:44,0:44:99:0,111,1375	1/1:68,0:64:80.04:743,80,0	0/0:70,0:70:99:0,178,2191	0/0:65,0:66:99:0,162,1990	0/0:23,0:24:50.99:0,51,619	1/1:37,0:36:26.67:208,27,0	0/0:59,0:59:99:0,159,1977	0/0:45,0:45:99:0,123,1536	0/0:62,0:62:99:0,165,2051	0/0:51,0:50:99:0,138,1689	0/0:47,0:49:94.15:0,94,1344	0/0:35,0:33:87.01:0,87,1070	1/1:14,0:11:12.86:100,13,0	1/1:30,0:30:2.59:10,3,0	1/1:75,0:73:1.27:81,1,0	0/0:35,0:36:84.09:0,84,1023	0/0:28,0:28:69.21:0,69,869	0/0:58,0:58:99:0,124,1532	0/0:35,0:35:87.27:0,87,1085	0/0:49,0:49:99:0,123,1551	1/1:30,0:30:6.68:163,7,0	0/0:11,0:11:24.08:0,24,303
chr10	107044545	.	A	ACACACT	6675.01	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-6.748;DP=1183;FS=17.656;HRun=0;HaplotypeScore=273.6724;InbreedingCoeff=0.9458;MQ=53.67;MQ0=14;MQRankSum=-8.580;QD=25.38;ReadPosRankSum=-8.585;VQSLOD=2.0223;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,120,2485	0/0:14,0:13:26.95:0,27,195	0/0:50,0:12:20.34:0,20,434	0/0:30,0:7:14.03:0,14,285	0/0:27,0:27:69.24:0,69,1499	0/0:29,0:29:81.23:0,81,1707	0/0:43,0:43:99:0,114,2521	1/1:16,48:67:99:4345,104,0	0/0:68,0:68:99:0,190,4103	0/0:65,0:65:99:0,172,3696	0/0:22,0:22:54.17:0,54,1173	1/1:37,0:37:12.39:371,12,0	0/0:60,0:60:99:0,169,3618	0/0:46,0:46:99:0,132,2861	0/0:60,0:60:99:0,175,3763	0/0:52,0:51:99:0,144,3088	0/0:48,0:48:99:0,133,2657	0/0:34,0:32:90.26:0,90,1942	1/1:7,4:8:19.88:537,20,0	1/1:3,27:33:2.51:20,3,0	1/1:66,10:74:15.69:513,16,0	0/0:38,0:38:90.27:0,90,1919	0/0:29,0:29:84.22:0,84,1670	0/0:59,0:59:99:0,136,2853	0/0:36,0:36:90.30:0,90,1991	0/0:49,0:49:99:0,141,2920	1/1:2,27:33:35.62:888,36,0	0/0:12,0:12:33.04:0,33,616
chr10	107044547	.	A	ACACT	3637.41	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=13.829;DP=1194;FS=17.914;HRun=0;HaplotypeScore=248.8746;InbreedingCoeff=0.5216;MQ=53.73;MQ0=13;MQRankSum=-10.279;QD=14.73;ReadPosRankSum=-5.528;VQSLOD=1.2660;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,123,2120	0/1:14,0:13:5.08:5,0,111	0/0:49,0:12:20.30:0,20,386	0/0:30,0:8:17.95:0,18,249	0/0:27,0:27:72.22:0,72,1291	0/0:29,0:29:81.23:0,81,1429	0/0:42,0:42:99:0,114,2106	0/1:71,0:66:24.51:1792,0,25	0/0:69,0:69:99:0,189,3430	0/0:65,0:65:99:0,178,3154	0/0:22,0:22:57.16:0,57,990	1/1:13,24:38:50.03:955,50,0	0/0:62,0:62:99:0,175,3090	0/0:46,0:46:99:0,132,2373	0/0:61,0:61:99:0,178,3167	0/0:52,0:51:99:0,150,2643	0/0:48,0:49:99:0,130,2202	0/0:34,0:33:90.26:0,90,1616	0/1:11,0:8:0.13:208,0,0	0/0:34,0:34:11.08:0,11,94	0/1:81,0:78:99:223,0,111	0/0:37,0:37:93.27:0,93,1624	0/0:30,0:30:87.21:0,87,1437	0/0:57,0:57:99:0,139,2419	0/0:36,0:36:93.19:0,93,1684	0/0:55,0:55:99:0,150,2547	1/1:32,0:32:15.47:454,15,0	0/0:12,0:12:33.04:0,33,522
chr10	107044629	.	ACACACACTCACACACT	A	1301.72	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=2.547;DP=1283;FS=0.679;HRun=0;HaplotypeScore=522.0466;InbreedingCoeff=0.6909;MQ=55.87;MQ0=31;MQRankSum=-2.590;QD=17.13;ReadPosRankSum=-3.436;VQSLOD=-0.4650;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,144,6246	0/0:20,0:19:42.14:0,42,1601	0/0:35,0:9:16.30:0,16,307	0/1:33,0:7:6.17:6,0,77	0/0:31,0:31:81.23:0,81,2710	0/0:35,0:35:87.24:0,87,3202	0/0:61,0:61:99:0,129,3451	0/0:53,0:51:99:0,99,1831	0/0:63,0:63:99:0,147,5811	0/0:57,0:56:99:0,150,5562	0/0:27,0:27:66.21:0,66,2017	1/1:39,4:43:78.78:1395,79,0	0/0:41,0:41:99:0,102,4069	0/0:54,0:54:99:0,147,5239	0/0:51,0:51:99:0,125,4108	0/0:56,0:56:99:0,138,4854	0/0:35,0:35:78.08:0,78,2733	0/0:48,0:48:99:0,123,4085	0/0:21,0:10:27.09:0,27,1047	0/0:35,0:35:84.26:0,84,3293	0/0:142,0:140:99:0,178,6006	0/0:46,0:46:99:0,114,4388	0/0:35,0:34:87.26:0,87,3058	0/0:61,0:61:99:0,132,4657	0/0:38,0:38:93.15:0,93,3544	0/0:51,0:51:87.51:0,88,4640	0/0:38,0:38:92.95:0,93,4051	0/0:13,0:13:36.12:0,36,1179
chr10	107044637	.	T	TCA	666.23	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-0.584;DP=1327;FS=5.339;HRun=0;HaplotypeScore=207.8375;InbreedingCoeff=0.6955;MQ=55.64;MQ0=32;MQRankSum=-0.785;QD=9.13;ReadPosRankSum=-0.936;VQSLOD=3.0694;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,148,1938	1/1:1,18:19:45.15:760,45,0	0/0:50,0:12:26.10:0,26,295	0/1:54,0:10:6.31:6,0,58	0/0:32,0:32:90.25:0,90,1137	0/0:35,0:35:90.30:0,90,1196	0/0:57,0:57:99:0,141,1860	0/0:57,0:54:99:0,126,1634	0/0:60,0:60:99:0,148,1955	0/0:60,0:59:99:0,163,2117	0/0:26,0:26:65.89:0,66,849	0/0:44,0:44:85.33:0,85,782	0/0:46,0:46:99:0,120,1543	0/0:55,0:55:99:0,160,2111	0/0:50,0:50:99:0,112,1774	0/0:54,0:54:99:0,147,1907	0/0:34,0:34:65.32:0,65,1065	0/0:47,0:48:95.20:0,95,1583	0/0:21,0:12:33.07:0,33,416	0/0:37,0:37:99:0,99,1228	0/0:141,0:142:99:0,191,2505	0/0:50,0:50:99:0,135,1706	0/0:36,0:35:93.27:0,93,1192	0/0:66,0:67:99:0,156,2019	0/0:35,0:35:93.01:0,93,1216	0/0:48,0:48:99:0,132,1700	0/0:37,0:37:96.27:0,96,1256	0/0:12,0:12:36.12:0,36,477
chr10	107044726	.	TAC	T	256.67	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=5.083;DP=1320;FS=10.301;HRun=0;HaplotypeScore=233.8448;InbreedingCoeff=0.7502;MQ=56.17;MQ0=2;MQRankSum=-1.250;QD=4.58;ReadPosRankSum=-1.131;VQSLOD=1.4293;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,106,1774	1/1:4,7:11:27.09:350,27,0	0/0:49,0:30:62.33:0,62,851	0/0:43,0:30:29.67:0,30,811	0/0:44,1:45:90.37:0,90,1973	0/0:29,0:29:77.81:0,78,1242	0/0:41,0:41:99:0,105,1736	0/0:57,0:56:87.37:0,87,1168	0/0:67,0:67:99:0,187,3090	0/0:75,0:75:99:0,202,3236	0/0:26,0:26:72.23:0,72,1187	0/1:45,0:43:2.12:2,0,78	0/0:55,0:55:99:0,144,2407	0/0:48,0:48:99:0,123,2071	0/0:74,0:74:99:0,205,3411	0/0:58,1:58:99:0,163,2676	0/0:37,0:38:81.21:0,81,1309	0/0:28,0:28:29.15:0,29,908	0/0:25,0:21:50.71:0,51,566	0/0:49,0:49:99:0,114,1297	0/0:74,2:77:99:0,137,1582	0/0:68,0:68:99:0,196,3192	0/0:37,0:37:99:0,102,1676	0/0:73,0:74:99:0,159,2584	0/0:34,0:34:83.80:0,84,1424	0/0:55,0:55:99:0,153,2506	0/0:34,0:34:53.46:0,53,481	0/0:29,0:29:75.23:0,75,1240
chr10	107044729	.	A	ACACACT	986.83	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.212;DP=1319;FS=0.000;HRun=0;HaplotypeScore=337.4367;InbreedingCoeff=0.9988;MQ=56.08;MQ0=2;MQRankSum=-0.922;QD=21.45;ReadPosRankSum=-5.216;VQSLOD=1.1308;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,112,2300	0/0:10,0:10:26.43:0,26,323	0/0:51,0:31:70.57:0,71,1123	0/0:45,0:31:70.55:0,71,1196	0/0:45,0:45:99:0,132,2716	0/0:28,0:28:75.23:0,75,1598	0/0:42,0:42:99:0,108,2281	0/0:60,0:59:99:0,123,2079	0/0:64,0:64:99:0,184,3985	0/0:77,0:77:99:0,211,4216	0/0:28,0:28:78.22:0,78,1601	1/1:27,19:44:52.38:1082,52,0	0/0:55,0:55:99:0,150,3213	0/0:50,0:50:99:0,126,2791	0/0:74,0:74:99:0,208,4509	0/0:58,0:57:99:0,169,3590	0/0:37,0:37:84.40:0,84,1731	0/0:27,0:27:67.51:0,68,1246	0/0:24,0:20:54.16:0,54,977	0/0:49,0:49:99:0,114,2364	0/0:77,0:77:99:0,147,2920	0/0:67,0:67:99:0,199,4224	0/0:38,0:38:99:0,111,2274	0/0:72,0:72:99:0,146,3387	0/0:30,0:30:84.29:0,84,1914	0/0:57,0:57:99:0,160,3342	0/0:31,0:31:54.09:0,54,1179	0/0:29,0:29:78.21:0,78,1679
chr10	107044736	.	CAT	C	124.31	PASS	AB=0.958;AC=3;AF=0.054;AN=56;BaseQRankSum=9.679;DP=1310;FS=14.906;HRun=0;HaplotypeScore=242.0603;InbreedingCoeff=0.4847;MQ=56.60;MQ0=2;MQRankSum=-6.961;QD=2.22;ReadPosRankSum=-2.435;VQSLOD=0.7618;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,111,2018	1/1:10,0:10:4.73:106,5,0	0/0:49,0:30:86.95:0,87,1220	0/0:44,1:32:25.03:0,25,1030	0/0:43,0:43:99:0,111,2193	0/0:28,0:28:74.83:0,75,1392	0/0:43,0:43:99:0,120,2071	0/0:57,0:56:19.45:0,19,612	0/0:66,0:66:99:0,195,3384	0/0:79,0:79:99:0,235,3881	0/0:28,0:28:78.19:0,78,1311	0/1:44,2:44:99:111,0,345	0/0:52,0:52:99:0,153,2714	0/0:49,0:49:99:0,141,2441	0/0:72,0:72:99:0,214,3722	0/0:57,0:56:99:0,162,2989	0/0:37,0:37:92.99:0,93,1551	0/0:28,1:29:29.48:0,29,961	0/0:23,0:19:28.70:0,29,193	0/0:50,0:50:83.82:0,84,386	0/0:70,0:71:99:0,108,528	0/0:65,0:65:99:0,193,3405	0/0:39,0:39:99:0,114,1994	0/0:69,0:69:99:0,165,2825	0/0:32,0:32:90.24:0,90,1668	0/0:56,0:56:99:0,165,2906	0/0:35,0:35:7.20:0,7,59	0/0:27,0:27:78.23:0,78,1433
chr10	107044744	.	CAG	C	5768.78	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=18.363;DP=1286;FS=0.656;HRun=0;HaplotypeScore=223.1667;InbreedingCoeff=0.9995;MQ=58.02;MQ0=2;MQRankSum=-1.439;QD=25.87;ReadPosRankSum=0.196;VQSLOD=5.1030;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,101,2231	0/0:9,0:9:27.08:0,27,336	0/0:46,0:34:70.76:0,71,1476	0/0:44,0:33:79.54:0,80,1412	0/0:46,0:46:99:0,138,2454	0/0:31,0:31:86.86:0,87,1591	0/0:46,0:46:99:0,129,2282	1/1:20,33:52:99:1358,104,0	0/0:61,0:61:99:0,181,3350	0/0:79,0:79:99:0,232,4262	0/0:27,0:27:72.18:0,72,1302	0/0:43,0:40:27.56:0,28,896	0/0:51,0:51:99:0,151,2816	0/0:52,0:52:99:0,144,2569	0/0:70,0:70:99:0,205,3686	0/0:61,0:60:99:0,181,3253	0/0:38,0:38:81.17:0,81,1603	0/0:23,2:26:44.83:0,45,1039	1/1:2,21:20:57.13:738,57,0	1/1:0,46:46:82.64:1200,83,0	1/1:17,47:65:99:1702,125,0	0/0:64,0:64:99:0,187,3384	0/0:41,0:41:99:0,120,2222	0/0:56,2:58:99:0,150,2882	0/0:35,0:35:99:0,102,1876	0/0:56,0:56:99:0,169,3058	1/1:0,36:36:54.11:771,54,0	0/0:28,0:28:81.28:0,81,1550
chr10	107044822	.	T	TAC	1768.75	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.421;DP=1225;FS=6.566;HRun=0;HaplotypeScore=190.5614;InbreedingCoeff=0.9954;MQ=60.78;MQ0=6;MQRankSum=-2.390;QD=32.75;ReadPosRankSum=-2.883;VQSLOD=3.7642;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:93.59:0,94,1529	0/0:8,0:8:21.07:0,21,279	0/0:45,0:34:68.17:0,68,892	0/0:46,0:36:89.76:0,90,1059	0/0:33,0:33:84.28:0,84,1117	0/0:33,0:33:40.69:0,41,1016	0/0:36,0:36:90.10:0,90,1137	0/0:58,0:57:99:0,110,1556	0/0:60,0:60:99:0,157,2125	0/0:65,0:65:99:0,157,2140	0/0:34,0:34:99:0,99,1300	1/1:20,34:49:99:1864,114,0	0/0:39,0:39:99:0,108,1342	0/0:40,0:40:99:0,99,1272	0/0:71,0:71:99:0,202,2584	0/0:67,0:67:99:0,190,2499	0/0:31,0:31:69.23:0,69,917	0/0:27,0:27:72.51:0,73,955	0/0:31,0:31:72:0,72,890	0/0:54,0:54:99:0,126,1620	0/0:76,0:75:99:0,179,2323	0/0:38,0:38:99:0,99,1317	0/0:23,0:23:60.18:0,60,782	0/0:49,0:49:99:0,128,1690	0/0:37,0:37:99:0,105,1369	0/0:67,0:67:99:0,184,2379	0/0:39,0:38:84.16:0,84,1093	0/0:14,0:14:30.08:0,30,381
chr10	107045640	.	T	TGTGTGTGA	1790.90	PASS	AB=0.849;AC=7;AF=0.125;AN=56;BaseQRankSum=-3.148;DP=631;FS=1.102;HRun=0;HaplotypeScore=155.6768;InbreedingCoeff=0.5441;MQ=58.37;MQ0=17;MQRankSum=-1.770;QD=12.10;ReadPosRankSum=-1.381;VQSLOD=2.7394;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:71.87:0,72,804	0/0:8,0:8:2.75:0,3,24	0/0:32,0:15:23.03:0,23,225	0/0:54,0:26:25.85:0,26,352	0/0:12,0:12:26.96:0,27,274	0/0:15,0:15:35.97:0,36,430	0/0:18,0:18:38.95:0,39,376	0/1:22,0:22:3.95:239,0,4	0/0:24,0:23:35.34:0,35,682	0/0:25,0:25:64.22:0,64,742	0/0:6,0:6:9:0,9,132	0/0:26,0:26:9.64:0,10,77	0/0:20,0:20:48.03:0,48,722	0/0:14,0:14:23.68:0,24,254	0/0:17,0:17:48.02:0,48,740	0/0:14,0:14:42.04:0,42,729	0/0:21,0:21:59.98:0,60,784	0/0:33,0:33:89.94:0,90,1357	1/1:10,18:29:25.60:975,26,0	0/1:17,0:16:38.87:68,0,39	1/1:62,0:61:48.78:528,49,0	0/0:14,0:14:21.02:0,21,345	0/0:12,0:12:26.99:0,27,358	0/0:39,0:39:96.01:0,96,1644	0/0:18,0:18:47.98:0,48,622	0/0:22,0:22:55.35:0,55,592	0/1:3,12:17:6.95:122,0,7	0/0:7,0:7:17.99:0,18,258
chr10	107045646	.	T	TGA	629	PASS	AB=0.939;AC=6;AF=0.107;AN=56;BaseQRankSum=0.885;DP=613;FS=2.916;HRun=0;HaplotypeScore=88.1078;InbreedingCoeff=-0.1218;MQ=56.93;MQ0=20;MQRankSum=-2.690;QD=4.31;ReadPosRankSum=-0.890;VQSLOD=2.4805;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:74.86:0,75,684	0/0:8,0:8:6.06:0,6,51	0/0:34,0:13:29.01:0,29,271	0/0:54,0:24:39.88:0,40,399	0/0:12,0:12:29.86:0,30,255	0/0:15,0:15:35.97:0,36,352	0/0:18,0:18:38.94:0,39,336	0/1:17,0:17:99:138,0,144	0/0:24,0:23:35.09:0,35,489	0/0:24,0:24:68.51:0,69,687	0/0:5,0:5:9:0,9,95	0/0:26,0:26:7.18:0,7,72	0/0:18,0:18:47.98:0,48,510	0/0:13,0:13:29.72:0,30,268	0/0:17,0:17:48:0,48,515	0/0:14,0:14:42.05:0,42,494	0/0:20,0:20:59.62:0,60,555	0/0:30,0:30:89.84:0,90,877	0/1:29,0:28:99:165,0,108	0/1:9,8:16:41.71:42,0,57	0/1:62,3:63:99:378,0,136	0/0:12,0:12:24.01:0,24,261	0/0:12,0:12:26.99:0,27,280	0/0:41,0:41:99:0,102,1114	0/0:19,0:19:50.99:0,51,505	0/0:22,0:22:65.71:0,66,592	0/1:12,0:12:21.94:22,0,25	0/1:6,0:6:2.78:3,0,141
chr10	107045859	.	TGG	T	3155.38	PASS	AB=0.938;AC=15;AF=0.278;AN=54;BaseQRankSum=4.212;DP=433;FS=1.469;HRun=10;HaplotypeScore=65.6353;InbreedingCoeff=0.9228;MQ=77.26;MQ0=0;MQRankSum=-2.477;QD=22.54;ReadPosRankSum=0.947;VQSLOD=3.0173;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:26:52.63:0,53,716	1/1:1,9:10:27.07:301,27,0	0/0:16,0:16:26.13:0,26,241	0/0:11,0:11:17.52:0,18,198	0/0:12,0:14:25.90:0,26,301	0/0:10,0:10:15.05:0,15,236	0/0:17,0:17:34.88:0,35,478	1/1:3,19:22:54.10:585,54,0	0/0:11,0:11:21.07:0,21,333	0/0:16,0:18:26.55:0,27,365	./.	1/1:3,15:18:42.10:468,42,0	0/1:14,0:15:0.66:1,0,404	0/0:14,0:16:20.41:0,20,240	0/0:13,0:13:27.09:0,27,429	0/0:13,0:19:42.53:0,43,432	0/0:28,0:33:67.09:0,67,814	0/0:11,0:15:34.37:0,34,414	1/1:3,13:16:33.05:367,33,0	1/1:2,14:16:42.11:467,42,0	1/1:3,26:30:63.07:761,63,0	0/0:7,0:7:9.03:0,9,143	0/0:11,0:13:20.04:0,20,253	0/0:15,0:17:44.12:0,44,636	0/0:8,0:8:12.02:0,12,162	0/0:17,0:18:23.57:0,24,336	1/1:3,10:13:36.09:400,36,0	0/0:7,0:7:15.05:0,15,238
chr10	107045868	.	GGT	G	738.01	PASS	AB=0.978;AC=9;AF=0.161;AN=56;BaseQRankSum=12.744;DP=429;FS=5.227;HRun=0;HaplotypeScore=70.4843;InbreedingCoeff=0.3164;MQ=77.21;MQ0=0;MQRankSum=-2.490;QD=5.39;ReadPosRankSum=5.519;VQSLOD=1.8758;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:77.75:0,78,935	0/1:11,0:11:17.68:88,0,18	0/0:18,0:17:17.05:0,17,307	0/0:8,0:8:23.83:0,24,293	0/0:13,0:13:29.80:0,30,352	0/0:6,0:6:18.04:0,18,265	0/0:21,0:21:57.07:0,57,702	0/1:26,0:26:50.85:51,0,130	0/0:11,0:11:30.06:0,30,388	0/0:23,0:23:56.04:0,56,663	0/0:3,0:3:5.99:0,6,50	1/1:15,0:15:39.78:214,40,0	0/0:13,1:14:11.61:0,12,468	0/0:10,0:10:20.92:0,21,275	0/0:9,0:9:27.08:0,27,406	0/0:18,0:18:44.52:0,45,459	0/0:27,0:27:74.57:0,75,965	0/0:17,0:17:44.72:0,45,516	0/1:22,0:22:32.50:32,0,209	1/1:14,1:15:26.20:187,26,0	0/1:32,0:32:50:154,0,50	0/0:7,0:7:20.96:0,21,239	0/0:13,0:13:35.71:0,36,395	0/0:20,0:20:59.90:0,60,760	0/0:6,0:6:18.01:0,18,238	0/0:12,0:12:32.98:0,33,444	0/1:14,2:16:37.28:163,0,37	0/0:9,0:9:27.03:0,27,352
chr10	107046685	.	G	GATGCCTTAC	13340.79	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-8.101;DP=517;FS=5.135;HRun=0;HaplotypeScore=141.6971;InbreedingCoeff=0.9957;MQ=83.32;MQ0=0;MQRankSum=-13.677;QD=117.02;ReadPosRankSum=-0.022;VQSLOD=5.8116;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,3049	1/1:2,6:9:24.04:1092,24,0	0/0:22,0:22:60.21:0,60,1722	0/0:18,0:18:41.74:0,42,1258	0/0:17,0:17:48.14:0,48,1375	0/0:13,0:13:36.11:0,36,1157	0/0:29,0:29:84.25:0,84,2511	1/1:6,7:15:42.13:1873,42,0	0/0:15,0:15:45.15:0,45,1446	0/0:15,0:15:45.13:0,45,1318	0/0:9,0:9:24.07:0,24,776	1/1:5,12:18:51.18:2383,51,0	0/0:21,0:21:63.19:0,63,1854	0/0:16,0:16:48.15:0,48,1395	0/0:14,0:14:39.13:0,39,1256	0/0:17,0:17:51.16:0,51,1508	0/0:36,0:36:99:0,105,3277	0/0:27,0:27:81.22:0,81,2336	1/1:8,7:19:54.17:2121,54,0	1/1:2,13:16:42.14:2080,42,0	1/1:3,10:17:27.09:1068,27,0	0/0:12,0:12:23.85:0,24,623	0/0:7,0:7:15.05:0,15,489	0/0:25,0:25:72.25:0,72,2328	0/0:14,0:14:42.14:0,42,1370	0/0:21,0:21:63.19:0,63,1896	1/1:2,16:20:54.19:2723,54,0	0/0:17,0:17:51.17:0,51,1478
chr10	107047456	.	CCTT	C	1334.76	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.764;DP=727;FS=4.678;HRun=0;HaplotypeScore=102.9205;InbreedingCoeff=0.9999;MQ=82.77;MQ0=0;MQRankSum=-0.574;QD=43.06;ReadPosRankSum=2.697;VQSLOD=5.5050;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,156,3537	0/0:15,0:15:45.15:0,45,1029	0/0:24,0:24:60.21:0,60,1298	0/0:20,0:20:40.81:0,41,1140	0/0:22,0:22:60.15:0,60,1271	0/0:27,0:27:78.27:0,78,1797	0/0:25,0:24:75.26:0,75,1678	0/0:37,0:37:99:0,111,2511	0/0:29,0:29:84.29:0,84,1936	0/0:38,0:38:99:0,111,2488	0/0:21,0:21:63.22:0,63,1415	1/1:0,31:31:84.29:1430,84,0	0/0:18,0:18:54.19:0,54,1223	0/0:17,0:17:48.16:0,48,1082	0/0:21,0:21:60.21:0,60,1364	0/0:25,0:25:75.25:0,75,1662	0/0:26,0:26:75.26:0,75,1692	0/0:20,0:20:57.15:0,57,1258	0/0:22,0:22:66.23:0,66,1495	0/0:18,0:18:54.19:0,54,1233	0/0:38,0:38:99:0,111,2408	0/0:28,0:28:84.29:0,84,1937	0/0:26,0:26:75.24:0,75,1661	0/0:25,0:25:75.26:0,75,1730	0/0:15,0:15:45.15:0,45,1038	0/0:36,0:36:96.32:0,96,2142	0/0:28,0:28:81.28:0,81,1840	0/0:21,0:21:63.22:0,63,1442
chr10	107048043	.	G	GTGGGCA	5717.51	PASS	AB=0.787;AC=7;AF=0.125;AN=56;BaseQRankSum=10.509;DP=689;FS=2.054;HRun=0;HaplotypeScore=182.7962;InbreedingCoeff=-0.1444;MQ=79.37;MQ0=0;MQRankSum=-12.958;QD=28.45;ReadPosRankSum=0.702;VQSLOD=4.7189;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:51:99:0,147,3117	0/1:12,5:17:99:655,0,160	0/0:13,0:13:36.11:0,36,713	0/0:26,0:26:65.54:0,66,1307	0/0:15,0:15:42.12:0,42,922	0/0:19,0:19:48.16:0,48,1077	0/0:39,0:39:99:0,114,2524	0/1:30,2:32:99:1391,0,313	0/0:30,0:30:75.26:0,75,1697	0/0:27,0:27:75.26:0,75,1713	0/0:8,0:8:24.07:0,24,509	0/1:21,10:33:91.48:1652,0,91	0/0:16,0:16:45.13:0,45,980	0/0:26,0:26:69.04:0,69,1567	0/0:13,0:13:36.11:0,36,777	0/0:16,0:16:45.15:0,45,1037	0/0:35,0:35:90.31:0,90,2050	0/0:34,0:34:96.31:0,96,2125	0/1:21,6:28:99:750,0,636	0/1:12,5:17:99:339,0,144	0/1:35,14:52:99:152,0,251	0/0:14,0:14:36.12:0,36,829	0/0:16,0:16:45.15:0,45,993	0/0:38,0:38:99:0,108,2371	0/0:19,0:19:54.17:0,54,1192	0/0:27,0:27:75.26:0,75,1675	0/1:14,8:22:99:778,0,197	0/0:5,0:5:12:0,12,203
chr10	107049582	.	CGAGGCAG	C	322.07	PASS	AB=0.581;AC=1;AF=0.018;AN=56;BaseQRankSum=4.518;DP=897;FS=19.211;HRun=0;HaplotypeScore=201.3615;InbreedingCoeff=-0.0183;MQ=62.92;MQ0=6;MQRankSum=-3.104;QD=17.89;ReadPosRankSum=-0.322;VQSLOD=1.8526;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,5421	0/0:7,0:7:21.04:0,21,715	0/0:41,0:23:55.75:0,56,2012	0/0:50,0:30:77.34:0,77,2535	0/0:23,0:23:65.85:0,66,2432	0/0:21,0:21:63.22:0,63,2339	0/0:41,0:41:99:0,123,4702	0/0:33,0:33:99:0,99,3735	0/0:39,0:39:99:0,111,4331	0/0:35,0:35:99:0,102,3596	0/0:18,0:18:51.13:0,51,1864	0/1:0,12:15:64.01:397,0,64	0/0:29,0:29:87.30:0,87,3359	0/0:28,0:28:84.29:0,84,3168	0/0:45,0:45:99:0,126,4688	0/0:25,0:25:69.24:0,69,2663	0/0:41,0:41:99:0,123,4618	0/0:21,0:21:63.21:0,63,2418	0/0:25,0:24:69.24:0,69,2701	0/0:30,0:29:75.25:0,75,2844	0/0:71,1:70:99:0,186,6927	0/0:24,0:24:63.22:0,63,2287	0/0:20,0:20:60.15:0,60,1997	0/0:62,0:62:99:0,183,6935	0/0:24,0:24:72.25:0,72,2792	0/0:41,0:40:99:0,108,4057	0/0:20,0:20:57.19:0,57,2207	0/0:13,0:13:39.13:0,39,1453
chr10	107049655	.	AGT	A	996.73	PASS	AB=0.941;AC=15;AF=0.288;AN=52;BaseQRankSum=8.162;DP=789;FS=1.102;HRun=0;HaplotypeScore=106.2788;InbreedingCoeff=0.5343;MQ=48.99;MQ0=67;MQRankSum=-1.381;QD=3.45;ReadPosRankSum=-0.135;VQSLOD=2.4343;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:32:18.43:0,18,745	1/1:5,3:7:17.96:162,18,0	0/0:35,0:1:3.01:0,3,39	./.	0/0:31,0:31:7.15:0,7,623	0/1:19,0:18:1.58:2,0,403	0/0:29,0:29:39.03:0,39,516	1/1:37,7:32:20.34:241,20,0	0/1:37,1:39:5.72:6,0,740	0/1:32,3:32:18.68:19,0,828	0/0:12,0:11:24.08:0,24,373	./.	0/0:28,2:30:16.53:0,17,639	0/0:22,0:22:40.92:0,41,559	0/0:43,0:42:75.21:0,75,1098	0/0:24,1:25:17.47:0,17,776	0/1:27,0:30:21.28:21,0,245	0/0:27,0:26:30.42:0,30,839	1/1:20,1:14:17.95:166,18,0	1/1:15,1:15:8.87:61,9,0	1/1:36,10:42:32.48:293,32,0	0/0:35,0:35:45.37:0,45,891	0/0:17,1:18:10.52:0,11,539	0/0:41,1:42:17.34:0,17,939	0/0:20,0:16:29.95:0,30,388	0/0:40,0:40:79.95:0,80,1026	0/1:16,4:20:1.49:196,0,1	0/0:10,0:9:3.01:0,3,47
chr10	107049682	.	GTA	G	324.15	PASS	AB=0.992;AC=10;AF=0.185;AN=54;BaseQRankSum=9.234;DP=739;FS=22.927;HRun=0;HaplotypeScore=108.7733;InbreedingCoeff=0.5247;MQ=51.71;MQ0=18;MQRankSum=-2.201;QD=2.49;ReadPosRankSum=0.602;VQSLOD=0.7684;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:41:66.18:0,66,1304	1/1:8,1:7:17.53:171,18,0	0/0:28,0:3:9:0,9,87	0/0:29,0:6:8.95:0,9,69	0/1:31,1:32:32.84:33,0,858	0/0:25,0:24:48.45:0,48,696	0/0:30,1:30:66.09:0,66,721	0/1:22,0:15:33.15:55,0,33	0/0:42,0:42:47.88:0,48,1182	0/0:38,0:36:71:0,71,1167	0/0:14,0:13:19.10:0,19,498	./.	0/0:22,0:22:48.70:0,49,787	0/0:25,0:25:47.25:0,47,785	0/0:45,0:44:99:0,101,1589	0/0:26,0:26:25.07:0,25,1043	0/0:37,0:31:28.41:0,28,543	0/0:26,0:25:22.89:0,23,981	0/1:12,0:7:0.30:25,0,0	1/1:11,0:9:2.13:41,2,0	1/1:27,0:25:12.66:45,13,0	0/0:32,0:32:53.68:0,54,1232	0/0:26,1:27:17.10:0,17,812	0/0:47,0:47:43.11:0,43,1434	0/0:23,1:20:44.10:0,44,662	0/0:34,0:34:62.13:0,62,1262	0/1:17,0:16:2.88:103,0,3	0/0:6,0:5:5.05:0,5,67
chr10	107049684	.	AAG	A	288.06	PASS	AB=0.884;AC=6;AF=0.111;AN=54;BaseQRankSum=6.365;DP=741;FS=2.738;HRun=0;HaplotypeScore=109.9109;InbreedingCoeff=0.2073;MQ=51.60;MQ0=22;MQRankSum=-4.381;QD=2.91;ReadPosRankSum=0.724;VQSLOD=2.1812;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,2:42:90.29:0,90,1419	1/1:4,5:7:11.52:124,12,0	0/0:31,0:3:6.02:0,6,98	0/0:31,0:6:7.44:0,7,101	0/0:32,0:32:60.65:0,61,921	0/0:25,0:24:51.10:0,51,722	0/0:25,3:27:11.13:0,11,652	0/1:15,5:14:13.56:161,0,14	0/0:41,1:42:41.26:0,41,1078	0/0:35,2:35:8.38:0,8,1036	0/0:15,0:14:30.09:0,30,445	./.	0/0:21,0:21:51.14:0,51,769	0/0:25,0:25:51.12:0,51,788	0/0:45,0:44:90.29:0,90,1424	0/0:25,1:26:57.18:0,57,866	0/0:37,0:31:57.54:0,58,1001	0/1:25,1:25:0.07:0,0,637	0/0:11,1:7:14.94:0,15,119	0/0:10,1:9:3.01:0,3,33	0/1:19,8:25:14.65:93,0,15	0/0:33,0:33:72.24:0,72,1129	0/0:27,1:27:28.64:0,29,924	0/0:48,1:49:99:0,108,1701	0/0:24,0:20:51.16:0,51,802	0/0:34,0:34:44.27:0,44,869	0/1:17,0:16:26.30:26,0,94	0/0:6,0:5:6.02:0,6,84
chr10	107049698	.	G	GAC	983.36	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.803;DP=776;FS=14.034;HRun=0;HaplotypeScore=119.8332;InbreedingCoeff=0.7906;MQ=51.53;MQ0=28;MQRankSum=-6.800;QD=10.57;ReadPosRankSum=-2.934;VQSLOD=1.7969;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:99:0,99,1406	1/1:7,0:5:1.30:49,1,0	0/0:36,0:3:6.02:0,6,92	0/0:35,0:5:6.36:0,6,92	0/0:34,0:34:75.42:0,75,992	0/0:26,0:25:57.03:0,57,740	0/0:27,0:26:56.72:0,57,734	1/1:21,0:16:10.30:335,10,0	0/0:41,0:41:56.23:0,56,1151	0/0:41,0:41:72.13:0,72,1279	0/0:14,0:14:39.06:0,39,502	1/1:7,0:5:2.96:19,3,0	0/0:25,0:25:69.12:0,69,876	0/0:26,0:26:63.16:0,63,870	0/0:48,0:47:99:0,102,1499	0/0:29,0:29:75.15:0,75,977	0/0:38,0:32:49.73:0,50,998	0/0:24,0:23:45.55:0,46,691	1/1:12,0:7:18.03:270,18,0	1/1:7,0:5:2.97:39,3,0	1/1:21,1:22:20.37:232,20,0	0/0:39,0:39:99:0,102,1306	0/0:30,0:29:40.51:0,41,977	0/0:48,1:49:99:0,117,1637	0/0:26,0:22:60.14:0,60,827	0/0:40,0:40:83.23:0,83,1145	1/1:14,3:17:0.65:204,1,0	0/0:14,0:13:29.97:0,30,278
chr10	107049735	.	A	ACAGT	1727.44	PASS	AB=0.786;AC=11;AF=0.204;AN=54;BaseQRankSum=7.207;DP=712;FS=18.648;HRun=0;HaplotypeScore=122.1424;InbreedingCoeff=0.7849;MQ=53.87;MQ0=50;MQRankSum=-7.375;QD=22.15;ReadPosRankSum=-3.812;VQSLOD=1.1139;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:99:0,111,1974	./.	0/0:32,0:3:3.28:0,3,10	0/0:33,0:2:6.01:0,6,82	0/0:31,0:31:78.27:0,78,1471	0/0:22,0:22:57.17:0,57,988	0/0:28,0:28:63.20:0,63,1154	1/1:17,4:11:21:245,21,0	0/0:40,0:40:96.32:0,96,1786	0/0:34,0:33:93.18:0,93,1584	0/0:16,0:16:48.10:0,48,736	1/1:3,1:3:3.01:71,3,0	0/0:27,0:26:72.22:0,72,1284	0/0:28,0:28:78.25:0,78,1424	0/0:41,0:39:99:0,114,2042	0/0:30,0:30:87.27:0,87,1555	0/0:32,0:30:84.25:0,84,1523	0/0:19,0:19:54.18:0,54,969	0/1:8,3:3:3.94:46,0,4	1/1:6,7:13:18.06:482,18,0	1/1:6,4:7:2.98:25,3,0	0/0:37,0:37:99:0,105,1864	0/0:29,0:28:78.24:0,78,1385	0/0:37,1:37:18.80:0,19,1664	0/0:18,0:17:42.12:0,42,790	0/0:41,0:41:99:0,120,2187	1/1:5,14:19:42.11:1017,42,0	0/0:12,0:12:36.12:0,36,680
chr10	107049766	.	AGTGT	A	2429.82	PASS	AB=0.800;AC=11;AF=0.196;AN=56;BaseQRankSum=7.101;DP=782;FS=0.507;HRun=0;HaplotypeScore=145.4289;InbreedingCoeff=0.7981;MQ=57.15;MQ0=18;MQRankSum=-5.284;QD=20.59;ReadPosRankSum=-3.179;VQSLOD=3.0237;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:81.69:0,82,1733	0/0:5,0:5:8.96:0,9,165	0/0:24,0:5:8.69:0,9,88	0/0:48,0:17:31.44:0,31,457	0/0:26,0:27:69.02:0,69,1455	0/0:17,0:17:36.12:0,36,714	0/0:31,0:31:84.28:0,84,1736	1/1:7,23:26:57.12:828,57,0	0/0:42,0:42:87.28:0,87,1903	0/0:38,0:38:99:0,105,2191	0/0:16,0:16:48.14:0,48,946	1/1:5,0:4:0.47:1,0,0	0/0:34,0:33:84.25:0,84,1710	0/0:32,0:32:87.27:0,87,1947	0/0:39,0:37:99:0,99,2164	0/0:35,0:35:87.28:0,87,1893	0/0:29,0:29:71.61:0,72,1509	0/0:16,0:16:42.05:0,42,873	1/1:8,1:6:8.97:97,9,0	1/1:11,15:26:48.08:740,48,0	0/1:14,5:17:56.05:163,0,56	0/0:41,0:42:99:0,105,2250	0/0:30,0:31:77.99:0,78,1567	0/0:38,0:36:90.16:0,90,1822	0/0:14,0:14:41.85:0,42,851	0/0:49,1:50:80.32:0,80,2618	1/1:8,19:27:48.13:760,48,0	0/0:14,0:14:36.12:0,36,826
chr10	107049776	.	TGTGTGA	T	827.07	PASS	AB=0.970;AC=7;AF=0.125;AN=56;BaseQRankSum=9.407;DP=830;FS=0.503;HRun=0;HaplotypeScore=188.8670;InbreedingCoeff=0.3512;MQ=56.03;MQ0=19;MQRankSum=-5.753;QD=7.13;ReadPosRankSum=-0.323;VQSLOD=2.6152;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,115,2824	0/0:9,0:9:12.72:0,13,235	0/0:24,0:7:14.49:0,14,170	0/0:44,0:16:30.83:0,31,534	0/0:31,0:31:87.27:0,87,2337	0/0:15,0:15:42.13:0,42,1014	0/0:36,0:36:77.60:0,78,2396	0/1:39,0:31:53.83:572,0,54	0/0:45,0:45:87.28:0,87,2505	0/0:42,0:41:99:0,107,3358	0/0:17,0:17:51.15:0,51,1279	1/1:5,0:4:0.47:1,0,0	0/0:35,0:34:99:0,99,2534	0/0:31,0:31:90.28:0,90,2730	0/0:38,0:34:99:0,105,3062	0/0:33,0:33:93.31:0,93,2629	0/0:31,0:30:56.16:0,56,2196	0/0:19,0:19:51.15:0,51,1416	0/1:13,0:6:24.58:95,0,25	0/1:27,3:30:99:120,0,111	0/0:27,0:24:17.44:0,17,228	0/0:40,0:40:99:0,105,3076	0/0:33,0:32:90.17:0,90,2324	0/0:37,0:35:92.62:0,93,2576	0/0:16,0:16:48.11:0,48,1237	0/0:51,0:51:99:0,142,3734	1/1:27,2:29:9.87:157,10,0	0/0:14,0:14:36.12:0,36,1108
chr10	107049780	.	TGA	T	197.56	PASS	AB=0.939;AC=9;AF=0.161;AN=56;BaseQRankSum=4.590;DP=833;FS=1.322;HRun=0;HaplotypeScore=135.7339;InbreedingCoeff=-0.0481;MQ=55.83;MQ0=19;MQRankSum=1.027;QD=0.89;ReadPosRankSum=-2.304;VQSLOD=2.1468;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,1:45:65.83:0,66,1244	0/0:10,0:10:11.43:0,11,92	0/0:24,0:7:11.81:0,12,111	0/1:44,0:17:13.54:14,0,136	0/0:33,0:33:64.47:0,64,976	0/1:13,2:15:40.19:40,0,339	0/1:33,4:36:87.01:87,0,842	0/1:42,0:35:99:130,0,163	0/0:45,0:45:66.17:0,66,790	0/0:43,0:42:58.64:0,59,1420	0/0:18,0:18:39.01:0,39,465	1/1:5,0:4:0.47:1,0,0	0/0:33,1:34:41.44:0,41,973	0/0:29,0:29:75.21:0,75,1104	0/0:36,2:34:87.09:0,87,1234	0/1:30,2:32:0.61:1,0,921	0/0:29,0:28:7.02:0,7,823	0/0:18,0:18:48.05:0,48,636	0/1:14,3:9:38.72:39,0,100	0/0:32,0:32:31.13:0,31,278	0/0:31,0:28:8.92:0,9,206	0/0:39,1:40:37.87:0,38,1129	0/0:31,0:30:56.41:0,56,917	0/0:34,1:33:38.42:0,38,1043	0/0:15,0:15:38.84:0,39,450	0/0:48,0:48:78.65:0,79,1370	0/1:30,0:30:5.43:5,0,91	0/0:13,0:13:29.24:0,29,374
chr10	107049795	.	G	GAGAC	842.24	PASS	AB=0.792;AC=4;AF=0.071;AN=56;BaseQRankSum=-1.011;DP=853;FS=0.896;HRun=0;HaplotypeScore=165.4266;InbreedingCoeff=0.5455;MQ=53.37;MQ0=25;MQRankSum=-1.563;QD=13.81;ReadPosRankSum=1.685;VQSLOD=3.2491;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:86.90:0,87,1267	1/1:7,0:10:15.84:107,16,0	0/0:23,0:5:3:0,3,32	0/0:39,0:9:0.63:0,1,45	0/0:33,0:33:71.49:0,71,954	0/0:21,0:20:41.99:0,42,477	0/0:34,0:33:63.11:0,63,863	0/0:46,0:37:65.28:0,65,715	0/1:13,31:45:7.28:837,0,7	0/0:40,0:39:78.08:0,78,1160	0/0:18,0:18:23.64:0,24,337	0/1:6,0:5:0.04:0,0,0	0/0:33,0:33:72.14:0,72,1004	0/0:31,0:31:63.05:0,63,827	0/0:37,0:33:75.16:0,75,1073	0/0:31,0:31:57.12:0,57,781	0/0:27,0:26:60.17:0,60,926	0/0:18,0:18:39.02:0,39,523	0/0:27,0:11:24.01:0,24,280	0/0:36,0:36:68.54:0,69,904	0/0:44,0:41:59.44:0,59,675	0/0:38,0:38:60.08:0,60,770	0/0:30,0:29:48.05:0,48,677	0/0:35,0:34:72.08:0,72,1003	0/0:17,0:17:26.84:0,27,367	0/0:48,0:48:99:0,105,1431	0/0:28,0:28:47.78:0,48,652	0/0:12,0:12:12.02:0,12,170
chr10	107049867	.	AGT	A	119.68	PASS	AB=0.987;AC=11;AF=0.212;AN=52;BaseQRankSum=1.161;DP=777;FS=15.725;HRun=0;HaplotypeScore=122.8203;InbreedingCoeff=0.0969;MQ=50.27;MQ0=45;MQRankSum=0.887;QD=0.54;ReadPosRankSum=1.494;VQSLOD=1.5048;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:28.27:0,28,733	1/1:4,1:5:8.75:55,9,0	./.	./.	0/0:30,1:29:12.02:0,12,245	0/1:27,0:25:13.19:13,0,269	0/0:36,0:36:51.45:0,51,648	0/0:27,0:17:24.39:0,24,195	0/0:39,1:39:10.50:0,11,689	0/1:35,0:35:41.87:42,0,635	0/0:18,0:17:30.05:0,30,393	1/1:13,1:8:2.84:14,3,0	0/0:26,0:26:6.34:0,6,524	0/1:22,0:21:12.44:12,0,275	0/1:29,0:28:11.51:12,0,406	0/1:28,0:28:9.66:10,0,440	0/1:26,2:27:31.33:31,0,552	0/0:11,0:11:12.02:0,12,163	0/0:15,0:6:14.99:0,15,177	0/0:29,0:32:12.23:0,12,247	0/0:66,0:61:46.61:0,47,551	0/0:22,1:23:29.05:0,29,480	0/0:28,0:27:38.37:0,38,422	0/0:37,1:39:16.22:0,16,1004	0/0:22,2:23:32.98:0,33,388	0/1:33,1:35:72.17:72,0,474	0/0:25,0:24:27.09:0,27,242	0/0:11,0:10:23.92:0,24,211
chr10	107049895	.	TGA	T	647.36	PASS	AB=0.992;AC=10;AF=0.179;AN=56;BaseQRankSum=2.429;DP=808;FS=2.936;HRun=0;HaplotypeScore=135.5495;InbreedingCoeff=0.0127;MQ=50.25;MQ0=16;MQRankSum=-0.098;QD=2.36;ReadPosRankSum=-3.091;VQSLOD=2.0808;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,2:50:46.65:0,47,1076	0/1:10,0:10:10.35:73,0,10	0/0:8,0:1:3:0,3,28	0/0:17,0:4:9.01:0,9,87	0/0:31,1:30:52.90:0,53,545	0/0:24,0:22:29.55:0,30,292	0/0:37,0:36:50.19:0,50,797	1/1:27,0:18:18.82:162,19,0	0/0:43,0:41:26.48:0,26,831	0/0:34,0:34:58.81:0,59,804	0/0:17,0:17:30.53:0,31,395	0/1:26,0:19:24.83:26,0,25	0/0:25,0:25:20.17:0,20,611	0/0:24,0:24:34.78:0,35,446	0/0:30,2:31:15.01:0,15,561	0/1:30,1:31:27.97:28,0,577	0/1:27,0:27:19.18:19,0,623	0/0:11,0:11:10.03:0,10,269	0/1:17,0:10:55.41:79,0,55	0/1:39,0:38:86.80:160,0,87	0/1:67,0:60:99:215,0,205	0/0:32,0:32:36.43:0,36,559	0/0:26,0:25:38.85:0,39,465	0/0:51,0:50:99:0,112,1470	0/0:25,0:23:26.57:0,27,384	0/0:32,0:32:67.70:0,68,826	0/1:29,0:25:34.23:34,0,106	0/0:10,1:10:12.88:0,13,108
chr10	107050027	.	TAGAC	T	3446.18	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.471;DP=821;FS=8.556;HRun=0;HaplotypeScore=143.0937;InbreedingCoeff=0.9592;MQ=55.68;MQ0=12;MQRankSum=-0.240;QD=24.27;ReadPosRankSum=-0.672;VQSLOD=3.0620;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,102,2314	0/0:13,0:13:20.92:0,21,435	0/0:48,0:16:30:0,30,615	0/0:45,0:19:25.46:0,25,558	0/0:25,0:25:42.12:0,42,940	0/0:19,0:19:48.15:0,48,1050	0/0:30,0:30:63.20:0,63,1439	1/1:15,15:24:33.04:375,33,0	0/0:35,0:35:72.25:0,72,1709	0/0:42,0:42:96.29:0,96,2362	0/0:21,0:21:42.14:0,42,955	0/0:12,0:11:0:0,0,0	0/0:22,0:22:45.14:0,45,1045	0/0:24,0:24:60.21:0,60,1401	0/0:33,0:33:66.23:0,66,1572	0/0:34,0:34:87.27:0,87,1905	0/0:23,0:22:54.14:0,54,1138	0/0:22,0:21:36.96:0,37,1209	1/1:14,4:16:26.28:389,26,0	1/1:12,9:21:36.10:541,36,0	1/1:20,30:49:99:1725,111,0	0/0:32,0:32:75.22:0,75,1700	0/0:18,0:18:41.72:0,42,1023	0/0:51,1:52:61.90:0,62,2464	0/0:32,0:32:75.26:0,75,1824	0/0:29,0:29:54.18:0,54,1247	1/1:7,16:23:26.90:416,27,0	0/0:19,0:19:48.16:0,48,1133
chr10	107050103	.	AGT	A	798.65	PASS	AB=0.967;AC=15;AF=0.268;AN=56;BaseQRankSum=8.609;DP=787;FS=0.447;HRun=0;HaplotypeScore=136.4276;InbreedingCoeff=0.4175;MQ=55.04;MQ0=20;MQRankSum=1.071;QD=3.05;ReadPosRankSum=-0.037;VQSLOD=2.4955;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:54.89:0,55,703	1/1:12,0:11:7.64:46,8,0	0/0:29,0:13:6.01:0,6,58	0/0:30,0:16:8.95:0,9,73	0/0:31,0:30:54.94:0,55,492	0/0:15,4:19:17.93:0,18,161	0/0:39,0:39:6.28:0,6,474	1/1:44,0:35:11.82:188,12,0	0/0:36,0:34:25.56:0,26,540	0/0:32,0:32:34.34:0,34,506	0/0:18,0:17:38.76:0,39,330	0/1:32,0:25:37.22:72,0,37	0/0:25,0:25:29.99:0,30,429	0/0:28,0:26:35.65:0,36,355	0/0:30,0:30:53.67:0,54,726	0/1:31,0:31:2.23:2,0,389	0/1:20,2:20:31.63:32,0,355	0/0:16,0:15:32.98:0,33,354	0/1:18,0:15:26.02:73,0,26	1/1:18,0:17:9.17:107,9,0	1/1:41,0:40:43.37:292,43,0	0/0:25,0:26:13.68:0,14,391	0/0:29,1:27:3.60:0,4,318	0/0:49,0:49:40.12:0,40,866	0/1:21,2:22:8.16:8,0,252	0/0:28,1:27:45.82:0,46,484	1/1:21,0:18:0.62:145,1,0	0/0:15,0:14:6.08:0,6,196
chr10	107050123	.	TGTGTGA	T	2952.49	PASS	AB=0.993;AC=13;AF=0.232;AN=56;BaseQRankSum=1.974;DP=756;FS=8.038;HRun=0;HaplotypeScore=174.5368;InbreedingCoeff=0.3212;MQ=49.86;MQ0=23;MQRankSum=-1.107;QD=11.49;ReadPosRankSum=-4.135;VQSLOD=0.3474;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:39:93.24:0,93,1979	0/1:11,0:10:35.28:35,0,53	0/0:7,0:2:6.02:0,6,116	0/0:12,0:6:14.99:0,15,185	0/0:31,0:30:65.65:0,66,1177	0/0:22,0:22:32.84:0,33,516	0/0:37,0:37:73.41:0,73,1372	0/1:41,0:33:27.67:695,0,28	0/0:33,0:31:72.44:0,72,1342	0/1:33,0:31:41.50:41,0,972	0/1:22,0:21:1.09:1,0,560	0/1:26,0:21:45.76:46,0,120	0/0:26,0:26:36.39:0,36,1050	0/0:23,0:22:35.77:0,36,641	0/0:32,0:32:84.11:0,84,1762	0/0:33,0:32:65.66:0,66,1250	0/0:23,0:21:28.42:0,28,1044	0/1:20,0:20:7.18:7,0,869	0/1:19,1:13:55.31:254,0,55	1/1:17,1:17:32.19:439,32,0	1/1:36,0:35:56.22:835,56,0	0/0:31,0:31:32.49:0,32,1080	0/0:33,0:30:27.30:0,27,1009	0/0:53,0:52:61.58:0,62,2262	0/0:19,0:18:39.10:0,39,784	0/0:30,0:28:54.92:0,55,1177	1/1:26,3:26:24.64:765,25,0	0/0:12,0:9:25.62:0,26,506
chr10	107050125	.	TGTGA	T	1795.42	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=7.090;DP=764;FS=4.509;HRun=0;HaplotypeScore=157.7287;InbreedingCoeff=0.2572;MQ=49.87;MQ0=22;MQRankSum=-1.233;QD=5.04;ReadPosRankSum=-4.246;VQSLOD=1.0643;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:41:69.10:0,69,1293	1/1:2,10:11:8.21:92,8,0	0/0:6,0:2:6.01:0,6,58	0/0:12,0:5:8.95:0,9,73	0/0:32,0:31:37.93:0,38,698	0/0:21,0:21:29.74:0,30,322	0/1:36,0:36:49.48:49,0,714	0/1:42,0:34:1.81:327,0,2	0/0:31,0:30:50.49:0,50,876	0/1:35,0:33:99:111,0,307	0/1:23,0:21:35.93:36,0,200	0/1:23,0:19:37.93:66,0,38	0/0:26,0:26:25.09:0,25,588	0/0:23,0:22:15.38:0,15,394	0/0:31,0:31:83.72:0,84,1223	0/0:32,0:31:44.26:0,44,778	0/1:24,0:22:16.49:16,0,655	0/1:20,0:20:6.88:7,0,598	0/1:19,0:12:22.10:134,0,22	1/1:19,0:17:25.46:225,25,0	1/1:37,0:36:56.15:418,56,0	0/0:32,0:32:19.57:0,20,724	0/1:33,0:30:36.04:36,0,544	0/0:54,0:53:31.10:0,31,1458	0/0:19,0:18:35.69:0,36,525	0/0:31,0:29:28.01:0,28,712	1/1:32,0:29:41.87:458,42,0	0/0:15,0:12:15.07:0,15,358
chr10	107050127	.	TGA	T	1638.07	PASS	AB=0.985;AC=22;AF=0.423;AN=52;BaseQRankSum=5.895;DP=762;FS=0.912;HRun=0;HaplotypeScore=135.9020;InbreedingCoeff=-0.1774;MQ=49.70;MQ0=21;MQRankSum=-0.646;QD=2.96;ReadPosRankSum=-2.261;VQSLOD=2.4934;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:45,0:43:42.72:43,0,621	1/1:10,1:10:4.24:28,4,0	./.	./.	0/1:33,0:32:42.38:42,0,286	0/0:21,0:21:14.79:0,15,132	0/1:37,0:36:40.56:41,0,303	0/1:42,0:35:12.31:165,0,12	0/0:27,4:30:5.61:0,6,368	0/1:34,1:32:84:259,0,84	0/1:22,0:21:12.09:85,0,12	0/0:23,0:18:6.45:0,6,33	0/1:25,1:26:31.15:31,0,209	0/0:23,0:22:3.93:0,4,193	0/0:28,3:31:25.66:0,26,664	0/0:30,1:30:1.06:0,1,399	0/1:25,0:23:35.31:35,0,357	0/1:21,0:21:22.03:22,0,289	0/1:17,1:11:6.51:100,0,7	1/1:17,1:17:17.20:127,17,0	1/1:36,1:36:23.73:217,24,0	0/1:33,0:33:10.88:11,0,330	0/1:33,0:30:75.88:76,0,175	0/1:50,0:50:79.21:79,0,738	0/0:18,0:17:16.37:0,16,284	0/1:31,1:30:71.13:71,0,372	1/1:31,1:29:46.45:369,46,0	0/0:16,0:13:17.68:0,18,175
chr10	107050274	.	TGA	T	82.03	PASS	AB=0.945;AC=9;AF=0.196;AN=46;BaseQRankSum=2.933;DP=551;FS=18.972;HRun=0;HaplotypeScore=93.2355;InbreedingCoeff=-0.1113;MQ=69.55;MQ0=12;MQRankSum=-0.469;QD=0.48;ReadPosRankSum=0.044;VQSLOD=0.3457;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,1:29:33.71:34,0,41	0/0:5,0:6:0.49:0,0,10	./.	./.	0/0:15,0:15:2.60:0,3,10	0/0:17,0:16:8.50:0,8,62	0/0:24,0:21:6:0,6,66	./.	0/1:21,1:21:21.14:21,0,58	0/0:15,0:14:5.99:0,6,50	0/0:7,0:7:3:0,3,25	1/1:16,0:16:4.63:16,5,0	0/1:13,2:14:11.95:44,0,12	0/0:16,0:16:3.01:0,3,41	0/0:16,0:16:5.69:0,6,51	0/0:18,5:22:3.47:0,3,26	0/0:27,0:25:14.14:0,14,199	0/1:17,0:16:24.83:39,0,25	./.	0/1:17,0:19:2.18:26,0,2	0/0:27,0:26:2.13:0,2,8	0/0:24,0:24:3.01:0,3,42	0/0:18,0:18:2.99:0,3,24	0/1:29,2:29:13.85:14,0,134	./.	0/1:19,0:16:4.92:5,0,36	0/0:10,0:9:6.11:0,6,28	0/0:10,0:10:4.83:0,5,47
chr10	107050325	.	GAC	G	181.05	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=0.544;DP=702;FS=0.000;HRun=0;HaplotypeScore=100.6270;InbreedingCoeff=0.4670;MQ=48.36;MQ0=30;MQRankSum=-0.007;QD=2.59;ReadPosRankSum=-2.638;VQSLOD=1.5844;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:36:48.12:0,48,395	0/0:11,0:10:13.75:0,14,104	0/0:8,0:3:8.69:0,9,58	0/0:9,0:6:2.88:0,3,64	0/0:23,0:23:35.92:0,36,292	1/1:26,0:21:24.52:196,25,0	0/0:12,17:24:2.87:0,3,30	0/0:41,0:31:61.04:0,61,471	0/0:33,0:32:30.44:0,30,404	0/0:30,0:26:62.90:0,63,556	0/0:32,0:32:59.88:0,60,489	0/0:11,0:8:10.52:0,11,63	0/0:25,0:24:40.53:0,41,357	0/0:15,0:15:25.91:0,26,234	0/0:24,0:23:50.88:0,51,426	0/0:27,1:26:22.83:0,23,323	0/1:44,0:41:89.73:90,0,431	0/0:23,0:21:26.57:0,27,315	0/0:12,0:7:19.82:0,20,132	0/0:20,0:18:22.29:0,22,253	0/0:37,0:33:44.66:0,45,365	0/0:25,0:24:44.87:0,45,367	0/0:20,0:18:23.75:0,24,180	0/0:43,0:41:30.31:0,30,481	0/0:20,0:20:38.95:0,39,324	0/0:24,0:22:41.84:0,42,368	0/0:24,0:21:53.52:0,54,394	0/0:23,0:23:50.91:0,51,369
chr10	107050341	.	GAC	G	97.81	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.650;DP=711;FS=4.821;HRun=0;HaplotypeScore=105.4684;InbreedingCoeff=0.9337;MQ=56.10;MQ0=24;MQRankSum=-1.866;QD=6.99;ReadPosRankSum=0.081;VQSLOD=2.9968;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,1:37:32.07:0,32,1069	0/0:11,0:10:15.05:0,15,271	0/0:19,0:12:36.09:0,36,510	0/0:16,0:13:29.77:0,30,445	0/0:21,0:21:48.15:0,48,839	0/0:21,0:17:41.38:0,41,413	0/0:28,0:25:12.04:0,12,171	0/0:51,0:42:99:0,114,1842	0/0:26,0:25:63.20:0,63,1111	0/0:33,0:31:92.06:0,92,1537	0/0:24,0:24:60.21:0,60,1147	1/1:8,6:11:14.91:186,15,0	0/0:22,1:23:20.67:0,21,1095	0/0:18,0:18:39.03:0,39,678	0/0:23,0:22:63.20:0,63,1097	0/0:25,0:23:66.14:0,66,1113	0/0:37,1:36:55.69:0,56,1394	0/0:21,0:21:62.39:0,62,1041	0/0:15,0:12:36.12:0,36,596	0/0:21,0:20:33.37:0,33,692	0/0:34,4:36:56.94:0,57,1007	0/0:24,0:23:51.17:0,51,929	0/0:20,0:20:36.11:0,36,617	0/0:42,0:40:84.22:0,84,1464	0/0:19,0:19:42.14:0,42,789	0/0:22,0:20:60.20:0,60,1061	0/0:29,0:26:66.23:0,66,1170	0/0:24,0:24:66.12:0,66,1143
chr10	107050343	.	C	CAG	126.22	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.381;DP=716;FS=7.778;HRun=0;HaplotypeScore=108.1126;InbreedingCoeff=0.9345;MQ=60.77;MQ0=22;MQRankSum=-1.150;QD=9.02;ReadPosRankSum=-0.527;VQSLOD=2.8430;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:35:66.22:0,66,942	0/0:11,0:10:15.05:0,15,190	0/0:22,0:15:42.03:0,42,536	0/0:19,0:16:28.56:0,29,415	0/0:21,0:21:48.14:0,48,667	0/0:21,0:17:41.73:0,42,555	0/0:29,0:26:12.04:0,12,171	0/0:51,0:42:99:0,108,1291	0/0:26,0:25:63.21:0,63,900	0/0:33,0:31:85.79:0,86,1176	0/0:25,0:25:60.07:0,60,859	1/1:10,4:12:15.04:215,15,0	0/0:23,0:23:20.66:0,21,834	0/0:18,0:18:39.13:0,39,557	0/0:23,0:22:62.78:0,63,850	0/0:25,0:24:69.19:0,69,944	0/0:38,0:36:39.82:0,40,1144	0/0:21,0:21:63.12:0,63,840	0/0:15,0:12:36.03:0,36,449	0/0:21,0:20:38.18:0,38,473	0/0:41,0:37:56.87:0,57,679	0/0:24,0:23:54.17:0,54,754	0/0:19,0:19:36.11:0,36,490	0/0:41,0:39:84.28:0,84,1184	0/0:20,0:20:45.13:0,45,613	0/0:23,0:21:63.18:0,63,864	0/0:29,0:26:66.20:0,66,817	0/0:24,0:24:63.21:0,63,901
chr10	107050482	.	ATG	A	494.36	PASS	AB=0.953;AC=9;AF=0.161;AN=56;BaseQRankSum=6.421;DP=771;FS=0.580;HRun=0;HaplotypeScore=117.4335;InbreedingCoeff=0.1374;MQ=57.97;MQ0=5;MQRankSum=-1.288;QD=2.12;ReadPosRankSum=-0.431;VQSLOD=1.9933;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:66.09:0,66,902	0/0:10,0:11:9:0,9,79	0/0:23,0:21:0:0,0,0	0/0:35,0:24:10.34:0,10,110	0/0:24,1:25:11.20:0,11,584	0/0:21,0:21:29.13:0,29,366	0/1:29,0:29:43.82:44,0,506	0/0:25,0:37:32.59:0,33,280	0/1:28,2:31:24.69:25,0,656	0/0:28,0:28:39.08:0,39,500	0/1:16,1:17:3.93:4,0,297	1/1:19,15:34:47.80:500,48,0	0/0:33,1:34:32.10:0,32,876	0/0:23,1:24:11.20:0,11,573	0/1:26,1:27:0.01:0,0,502	0/1:33,2:35:0.69:1,0,974	0/0:28,1:31:4.99:0,5,593	0/0:17,0:17:7.02:0,7,405	0/0:16,0:16:16.53:0,17,145	0/0:16,0:17:3.58:0,4,68	0/0:32,0:33:14.20:0,14,132	0/1:29,1:30:42.27:42,0,564	0/1:27,2:28:0.81:1,0,404	0/0:40,1:41:23.21:0,23,747	0/0:16,0:16:20.41:0,20,380	0/0:29,0:29:45.08:0,45,604	0/0:24,0:28:19.96:0,20,274	0/0:21,0:21:36.08:0,36,499
chr10	107050551	.	ATG	A	5069.69	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.386;DP=896;FS=5.338;HRun=0;HaplotypeScore=137.8297;InbreedingCoeff=1.0000;MQ=65.48;MQ0=2;MQRankSum=-2.554;QD=30.91;ReadPosRankSum=-2.428;VQSLOD=5.8105;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,111,1843	0/0:16,0:15:36.12:0,36,612	0/0:50,0:46:92.98:0,93,1518	0/0:51,0:46:84.29:0,84,1568	0/0:20,0:20:51.17:0,51,855	0/0:25,0:25:72.25:0,72,1214	0/0:37,0:37:90.26:0,90,1494	1/1:6,46:51:99:1712,135,0	0/0:29,0:29:81.23:0,81,1316	0/0:34,0:34:93.29:0,93,1514	0/0:22,0:22:57.19:0,57,965	0/0:33,0:32:72.25:0,72,1224	0/0:32,0:32:78.22:0,78,1242	0/0:25,0:25:72.23:0,72,1163	0/0:38,0:38:99:0,99,1679	0/0:35,0:35:99:0,99,1679	0/0:37,0:37:96.29:0,96,1590	0/0:31,0:31:87.30:0,87,1468	1/1:2,17:19:48.07:597,48,0	1/1:4,22:26:69.22:896,69,0	1/1:6,41:47:99:1326,102,0	0/0:32,0:32:87.30:0,87,1464	0/0:25,0:25:57.19:0,57,950	0/0:42,0:42:99:0,102,1717	0/0:22,0:22:60.21:0,60,1020	0/0:30,0:30:81.28:0,81,1375	1/1:3,17:20:42.13:538,42,0	0/0:20,0:20:54.18:0,54,918
chr10	107050684	.	AT	A	252.41	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.254;DP=717;FS=6.122;HRun=8;HaplotypeScore=78.3022;InbreedingCoeff=0.9992;MQ=76.49;MQ0=0;MQRankSum=-1.076;QD=15.78;ReadPosRankSum=0.126;VQSLOD=3.6137;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,1234	0/0:11,0:11:30.09:0,30,362	0/0:15,0:15:36.11:0,36,426	0/0:20,0:20:45.07:0,45,497	0/0:26,0:26:72.17:0,72,843	0/0:17,0:17:45.13:0,45,532	0/0:25,0:25:66.18:0,66,774	0/0:41,0:41:99:0,105,1249	0/0:27,0:27:78.23:0,78,932	0/0:39,0:39:99:0,105,1233	0/0:23,0:23:60.17:0,60,715	1/1:1,15:16:35.87:347,36,0	0/0:27,0:27:81.21:0,81,962	0/0:21,0:21:60.18:0,60,723	0/0:42,0:42:99:0,114,1366	0/0:38,0:38:99:0,111,1330	0/0:28,0:28:81.21:0,81,962	0/0:17,0:17:48.13:0,48,567	0/0:19,0:19:51.15:0,51,606	0/0:28,0:28:75.23:0,75,903	0/0:26,0:26:69.17:0,69,807	0/0:29,0:29:84.26:0,84,1015	0/0:34,0:34:99:0,99,1137	0/0:22,0:22:51.16:0,51,614	0/0:22,0:22:63.19:0,63,752	0/0:23,0:23:60.18:0,60,725	0/0:21,0:21:63.18:0,63,749	0/0:22,0:22:60.18:0,60,724
chr10	107050989	.	T	TG	6849.10	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-14.024;DP=747;FS=1.409;HRun=4;HaplotypeScore=70.4505;InbreedingCoeff=0.9971;MQ=89.32;MQ0=0;MQRankSum=-2.134;QD=36.43;ReadPosRankSum=-0.877;VQSLOD=4.6698;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,171,1928	1/1:1,14:16:39.13:533,39,0	0/0:28,0:28:81.20:0,81,913	0/0:28,0:28:67.03:0,67,725	0/0:24,0:24:60.17:0,60,676	0/0:20,0:20:57.16:0,57,646	0/0:30,0:30:84.21:0,84,931	1/1:2,26:28:78.19:1029,78,0	0/0:27,0:27:75.21:0,75,851	0/0:31,0:31:78.22:0,78,884	0/0:18,0:18:51.14:0,51,579	1/1:2,27:29:84.26:1132,84,0	0/0:31,0:31:90.26:0,90,1021	0/0:25,0:25:75.21:0,75,850	0/0:34,0:34:90.26:0,90,1021	0/0:22,0:22:57.16:0,57,647	0/0:35,0:35:99:0,105,1191	0/0:22,0:22:63.15:0,63,702	1/1:2,24:27:72.22:959,72,0	1/1:1,19:20:51.17:697,51,0	1/1:2,36:38:99:1392,102,0	0/0:20,0:20:60.16:0,60,670	0/0:26,0:26:66.16:0,66,728	0/0:20,0:20:57.16:0,57,647	0/0:18,0:18:48.14:0,48,545	0/0:32,0:32:90.26:0,90,1021	1/1:0,30:29:81.27:1108,81,0	0/0:5,0:5:15.04:0,15,170
chr10	107051271	.	TG	T	393.28	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.466;DP=457;FS=4.192;HRun=8;HaplotypeScore=55.7928;InbreedingCoeff=0.7887;MQ=79.15;MQ0=1;MQRankSum=-0.032;QD=20.70;ReadPosRankSum=0.183;VQSLOD=3.5823;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:45.13:0,45,532	0/0:5,0:6:13.65:0,14,74	0/0:30,0:21:9.47:0,9,355	0/0:25,1:24:28.61:0,29,374	0/0:14,0:14:39.12:0,39,467	0/0:14,0:14:36.07:0,36,410	0/0:23,0:23:60.08:0,60,704	0/0:16,0:16:32.68:0,33,359	0/0:15,0:15:45.13:0,45,531	0/0:8,0:8:18.04:0,18,195	0/0:14,0:14:39.09:0,39,441	1/1:4,15:19:48.70:488,49,0	0/0:16,0:16:45.14:0,45,543	0/0:14,0:14:39.12:0,39,469	0/0:15,0:15:36.11:0,36,435	0/0:7,0:7:21.06:0,21,254	0/0:18,0:18:51.15:0,51,607	0/0:16,0:16:36.11:0,36,434	0/0:17,0:17:51.16:0,51,616	0/0:17,0:17:45.13:0,45,530	0/0:26,0:26:69.21:0,69,833	0/0:19,0:19:51.15:0,51,610	0/0:9,0:9:27.08:0,27,320	0/0:32,0:32:90.26:0,90,1074	0/0:10,0:10:30.09:0,30,362	0/0:20,0:20:57.17:0,57,688	0/0:15,0:15:36.11:0,36,435	0/0:1,0:1:3.01:0,3,36
chr10	107051361	.	G	GT	1160.09	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.168;DP=564;FS=0.000;HRun=1;HaplotypeScore=70.1087;InbreedingCoeff=0.9823;MQ=88.17;MQ0=0;MQRankSum=-3.468;QD=33.15;ReadPosRankSum=0.275;VQSLOD=3.2261;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:90.29:0,90,1168	1/1:0,8:8:15.05:225,15,0	0/0:22,0:22:63.20:0,63,810	0/0:22,0:22:55.63:0,56,704	0/0:13,0:13:36.12:0,36,467	0/0:19,0:19:57.19:0,57,740	0/0:32,0:32:93.29:0,93,1191	0/0:24,0:24:69.18:0,69,844	0/0:16,0:16:48.16:0,48,623	0/0:14,0:14:42.14:0,42,545	0/0:6,0:6:15.05:0,15,195	1/1:4,23:27:72.20:1054,72,0	0/0:12,0:12:36.12:0,36,467	0/0:20,0:20:57.18:0,57,738	0/0:16,0:16:48.16:0,48,623	0/0:13,0:13:39.13:0,39,506	0/0:21,0:21:63.20:0,63,817	0/0:36,0:36:99:0,108,1400	0/0:13,0:13:39.13:0,39,506	0/0:9,0:9:27.09:0,27,344	0/0:63,0:63:99:0,178,2273	0/0:17,0:17:48.16:0,48,623	0/0:9,0:9:27.09:0,27,344	0/0:35,0:35:99:0,105,1362	0/0:19,0:19:51.17:0,51,662	0/0:14,0:14:36.12:0,36,467	0/0:19,0:18:57.19:0,57,740	0/0:15,0:15:42.12:0,42,530
chr10	107051866	.	G	GCTT	2025.55	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.444;DP=606;FS=3.326;HRun=0;HaplotypeScore=89.9681;InbreedingCoeff=0.9512;MQ=77.74;MQ0=0;MQRankSum=-2.527;QD=53.30;ReadPosRankSum=3.434;VQSLOD=6.1864;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.29:0,90,1445	1/1:2,4:6:12.04:268,12,0	0/0:13,0:13:24.08:0,24,359	0/0:23,0:23:60.16:0,60,869	0/0:14,0:14:36.12:0,36,588	0/0:9,0:9:24.08:0,24,392	0/0:28,0:28:78.27:0,78,1274	0/0:28,0:27:81.28:0,81,1321	0/0:29,0:29:81.28:0,81,1320	0/0:12,0:12:36.12:0,36,588	0/0:9,0:9:24.08:0,24,392	1/1:2,30:32:84.29:1874,84,0	0/0:23,0:23:69.24:0,69,1127	0/0:24,0:24:69.22:0,69,1103	0/0:36,0:36:99:0,99,1569	0/0:26,0:26:78.27:0,78,1274	0/0:29,0:29:81.25:0,81,1274	0/0:38,0:38:99:0,105,1711	0/0:16,0:16:30.10:0,30,475	0/0:18,0:18:48.16:0,48,781	0/0:48,0:48:99:0,135,2143	0/0:13,0:13:33.07:0,33,510	0/0:16,0:16:45.15:0,45,735	0/0:37,0:37:96.33:0,96,1568	0/0:12,0:12:36.12:0,36,588	0/0:16,0:16:45.15:0,45,729	0/0:15,0:15:39.13:0,39,627	0/0:3,0:3:9.03:0,9,147
chr10	107052784	.	TGCGC	T	1989	PASS	AB=0.918;AC=15;AF=0.268;AN=56;BaseQRankSum=10.493;DP=629;FS=22.325;HRun=0;HaplotypeScore=126.1131;InbreedingCoeff=0.7325;MQ=64.64;MQ0=5;MQRankSum=-1.580;QD=10.69;ReadPosRankSum=-0.266;VQSLOD=1.5585;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:83.98:0,84,1364	0/1:10,0:12:3.36:112,0,3	1/1:9,0:8:5.80:32,6,0	0/1:7,0:6:23.01:23,0,23	0/0:23,0:26:35.78:0,36,540	0/0:19,0:19:38.66:0,39,774	0/0:26,0:26:38.67:0,39,665	1/1:14,11:25:33.08:447,33,0	0/0:22,0:22:35.89:0,36,670	0/0:28,0:28:45.24:0,45,696	0/0:26,0:26:45.28:0,45,873	0/1:23,0:26:26.28:41,0,26	0/0:17,0:17:24.05:0,24,342	0/0:26,0:25:45.10:0,45,652	0/0:22,0:25:32.88:0,33,550	0/0:16,0:16:30.10:0,30,608	0/0:22,0:22:51.13:0,51,814	0/0:21,0:24:60.98:0,61,1055	1/1:17,2:19:24.06:298,24,0	1/1:17,4:21:17.78:235,18,0	1/1:51,3:54:55.28:767,55,0	0/0:27,0:27:57.13:0,57,907	0/0:16,0:15:34.34:0,34,654	0/0:30,0:30:69.09:0,69,1356	0/0:21,0:21:30.09:0,30,510	0/0:20,0:20:36.05:0,36,653	1/1:10,2:12:15.05:223,15,0	0/0:10,0:9:21.54:0,22,415
chr10	107052799	.	GCA	G	173.02	PASS	AB=0.978;AC=23;AF=0.442;AN=52;BaseQRankSum=4.533;DP=560;FS=2.165;HRun=0;HaplotypeScore=91.8839;InbreedingCoeff=-0.0984;MQ=55.65;MQ0=6;MQRankSum=-1.086;QD=0.42;ReadPosRankSum=0.158;VQSLOD=1.6321;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:38:0.77:1,0,412	0/1:12,0:12:10:10,0,55	./.	./.	0/1:20,0:20:11.18:11,0,164	0/1:20,1:21:6.12:6,0,262	0/1:33,0:33:3.50:4,0,368	1/1:18,0:18:0.69:14,1,0	0/0:20,0:20:29.86:0,30,310	0/0:18,1:19:0.27:0,0,202	0/0:26,0:27:23.51:0,24,230	0/1:25,0:25:1.99:2,0,182	0/1:10,0:10:24.35:24,0,116	0/1:20,0:19:25.67:26,0,143	0/1:10,0:10:0.40:0,0,102	0/1:10,2:12:15.13:15,0,167	0/1:20,4:24:3.18:3,0,244	0/1:28,0:29:47.77:48,0,303	1/1:17,0:16:9.59:63,10,0	1/1:14,0:14:2.75:15,3,0	0/1:57,0:57:0:0,0,1	0/1:23,0:23:19.55:20,0,275	0/0:13,0:12:17.99:0,18,217	0/0:32,0:32:48.07:0,48,606	0/0:14,0:14:14.90:0,15,176	0/1:20,0:19:14.77:15,0,248	1/1:10,0:10:8.43:40,8,0	0/0:12,0:11:20.85:0,21,207
chr10	107052835	.	ACACG	A	1268.67	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-0.239;DP=614;FS=7.664;HRun=0;HaplotypeScore=101.5010;InbreedingCoeff=0.8987;MQ=66.67;MQ0=11;MQRankSum=-3.412;QD=10.31;ReadPosRankSum=0.274;VQSLOD=2.2258;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:86.62:0,87,1336	0/0:11,0:11:20.68:0,21,284	0/0:23,0:13:32.18:0,32,361	0/0:27,0:18:24.25:0,24,315	0/0:17,0:17:37.74:0,38,574	0/0:17,0:17:39.04:0,39,729	0/0:37,0:37:70.36:0,70,1233	1/1:17,0:17:51.06:551,51,0	0/0:15,0:15:42.03:0,42,789	0/0:28,0:28:78.31:0,78,969	0/0:23,0:23:50.67:0,51,788	0/0:25,0:25:65.90:0,66,963	0/0:12,0:12:29.72:0,30,428	0/0:21,0:20:55.63:0,56,721	0/0:10,0:10:26.90:0,27,337	0/0:18,0:17:41.94:0,42,533	0/0:23,0:23:56.75:0,57,881	0/0:26,0:26:67.27:0,67,998	1/1:18,4:21:58.18:637,58,0	1/1:0,14:14:2.31:52,2,0	1/1:2,57:59:2.62:21,3,0	0/0:22,0:22:62.94:0,63,933	0/0:13,0:12:35.91:0,36,533	0/0:30,0:30:77.99:0,78,1456	0/0:14,0:14:29.99:0,30,524	0/0:31,0:30:78.10:0,78,954	1/1:1,10:11:13.91:164,14,0	0/0:11,0:10:24.06:0,24,481
chr10	107053684	.	C	CTGTTGGGCAAT	18350.91	PASS	AB=0.667;AC=13;AF=0.232;AN=56;BaseQRankSum=-2.269;DP=646;FS=2.678;HRun=0;HaplotypeScore=200.7029;InbreedingCoeff=0.8992;MQ=89.38;MQ0=0;MQRankSum=-16.112;QD=134.93;ReadPosRankSum=-3.490;VQSLOD=4.7148;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,4820	0/1:9,8:18:61.94:2097,0,62	0/0:34,0:34:93.32:0,93,2907	0/0:21,0:20:56.26:0,56,1724	0/0:22,0:22:66.23:0,66,2211	0/0:15,0:15:36.11:0,36,1200	0/0:30,0:30:90.31:0,90,3021	1/1:23,4:27:81.28:4096,81,0	0/0:19,0:19:57.20:0,57,1976	0/0:29,0:29:84.28:0,84,2898	0/0:12,0:12:33.10:0,33,1082	1/1:6,13:19:51.18:2747,51,0	0/0:26,0:26:72.23:0,72,2426	0/0:29,0:29:87.30:0,87,2969	0/0:26,0:26:78.27:0,78,2626	0/0:22,0:22:60.21:0,60,2049	0/0:32,0:32:96.29:0,96,3211	0/0:20,0:20:57.20:0,57,1985	1/1:7,2:10:30.08:1063,30,0	1/1:10,11:22:60.21:3047,60,0	1/1:12,12:26:60.20:3007,60,0	0/0:20,0:20:51.17:0,51,1819	0/0:8,0:8:24.07:0,24,712	0/0:32,0:32:96.33:0,96,3347	0/0:30,0:30:78.27:0,78,2782	0/0:22,0:22:63.22:0,63,2248	1/1:4,10:14:42.14:2295,42,0	0/0:13,0:13:36.11:0,36,1186
chr10	107054824	.	C	CT	1858.32	PASS	AB=0.794;AC=10;AF=0.179;AN=56;BaseQRankSum=-6.176;DP=549;FS=0.000;HRun=10;HaplotypeScore=56.9859;InbreedingCoeff=0.7749;MQ=68.90;MQ0=0;MQRankSum=-2.352;QD=17.21;ReadPosRankSum=-3.853;VQSLOD=2.7147;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:42:99:0,107,865	0/0:16,0:16:44.91:0,45,365	0/1:11,0:9:5.76:6,0,17	0/0:10,0:8:4.19:0,4,67	0/0:23,0:23:56.91:0,57,465	0/0:20,0:20:53.92:0,54,443	0/0:20,0:21:46.91:0,47,372	1/1:7,14:21:42.06:425,42,0	0/0:13,1:14:9.97:0,10,288	0/0:22,0:22:56.06:0,56,466	0/0:12,1:13:3.96:0,4,236	0/0:19,0:19:50.93:0,51,418	0/0:19,0:19:53.93:0,54,443	0/0:19,0:19:44.89:0,45,361	0/0:17,0:17:41.93:0,42,342	0/0:15,0:15:41.94:0,42,345	0/0:25,0:26:71.83:0,72,578	0/0:18,0:18:50.88:0,51,410	1/1:9,17:26:29.55:512,30,0	0/1:3,6:10:0.75:182,0,1	1/1:2,12:14:33.08:352,33,0	0/0:17,0:17:41.94:0,42,345	0/0:20,0:21:55.94:0,56,449	0/0:23,0:23:65.92:0,66,542	0/0:31,0:31:86.85:0,87,708	0/0:24,0:24:62.89:0,63,515	1/1:5,20:26:54.40:547,54,0	0/0:11,0:11:26.95:0,27,222
chr10	107055397	.	C	CGTCT	1482.69	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.238;DP=598;FS=0.862;HRun=0;HaplotypeScore=102.6096;InbreedingCoeff=0.9216;MQ=79.68;MQ0=0;MQRankSum=-1.075;QD=49.42;ReadPosRankSum=0.623;VQSLOD=3.9614;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.14:0,72,1241	0/0:3,0:3:9.03:0,9,179	0/0:13,0:13:30.10:0,30,577	0/0:16,0:16:42.82:0,43,656	0/0:5,0:5:14.97:0,15,219	0/0:9,0:9:24.07:0,24,443	0/0:39,0:39:99:0,114,2065	0/0:18,0:18:51.17:0,51,922	0/0:16,0:16:45.14:0,45,861	0/0:21,0:21:59.71:0,60,997	0/0:17,0:17:41.68:0,42,695	1/1:3,25:30:57.20:1578,57,0	0/0:22,0:22:63.15:0,63,1205	0/0:25,0:25:63.87:0,64,1257	0/0:23,0:23:68.94:0,69,1145	0/0:26,0:26:75.25:0,75,1461	0/0:43,0:43:99:0,126,2407	0/0:37,0:37:99:0,108,2054	0/0:17,0:17:48.04:0,48,793	0/0:7,0:7:20.99:0,21,341	0/0:48,0:48:99:0,132,2400	0/0:14,0:14:39.03:0,39,612	0/0:7,0:7:21.06:0,21,385	0/0:35,0:34:99:0,102,1840	0/0:19,0:19:48.10:0,48,850	0/0:27,0:27:78.13:0,78,1337	0/0:21,0:21:60.17:0,60,1092	0/0:14,0:14:42.14:0,42,821
chr10	107057040	.	CTG	C	4436.29	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.503;DP=668;FS=10.811;HRun=0;HaplotypeScore=78.1482;InbreedingCoeff=0.9997;MQ=87.08;MQ0=0;MQRankSum=0.571;QD=39.97;ReadPosRankSum=-1.015;VQSLOD=5.9369;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,2574	0/0:10,0:10:30.10:0,30,562	0/0:24,0:24:66.20:0,66,1161	0/0:23,0:23:57.06:0,57,992	0/0:18,0:18:54.19:0,54,997	0/0:14,0:14:42.14:0,42,778	0/0:26,0:26:72.25:0,72,1349	1/1:1,18:19:54.17:771,54,0	0/0:24,0:24:69.24:0,69,1292	0/0:35,0:35:96.32:0,96,1768	0/0:15,0:15:42.14:0,42,780	0/0:20,0:20:60.21:0,60,1123	0/0:16,0:16:48.16:0,48,897	0/0:34,0:34:99:0,99,1845	0/0:29,0:28:87.30:0,87,1622	0/0:24,0:24:72.25:0,72,1349	0/0:30,0:30:84.29:0,84,1556	0/0:33,0:33:96.33:0,96,1788	1/1:0,17:17:51.17:750,51,0	1/1:1,18:19:54.18:795,54,0	1/1:1,30:31:81.27:1193,81,0	0/0:25,0:25:69.22:0,69,1253	0/0:11,0:11:30.10:0,30,562	0/0:39,0:39:99:0,114,2035	0/0:14,0:14:42.14:0,42,777	0/0:27,0:27:78.26:0,78,1431	1/1:1,24:25:63.21:927,63,0	0/0:19,0:19:57.19:0,57,1048
chr10	107057899	.	CTG	C	293.40	PASS	AB=0.972;AC=16;AF=0.308;AN=52;BaseQRankSum=3.100;DP=701;FS=0.000;HRun=0;HaplotypeScore=85.7387;InbreedingCoeff=0.0058;MQ=59.39;MQ0=15;MQRankSum=0.672;QD=0.87;ReadPosRankSum=1.436;VQSLOD=1.4772;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:14.82:0,15,136	0/0:8,0:8:3.94:0,4,28	./.	./.	0/0:20,0:19:2.99:0,3,23	0/1:17,0:17:14.34:14,0,59	0/1:31,2:33:16.48:16,0,141	0/0:29,0:28:0:0,0,0	0/0:27,0:27:20.92:0,21,232	0/0:18,0:18:11.44:0,11,71	0/1:16,0:15:12.95:13,0,115	1/1:20,0:23:11.53:74,12,0	0/0:13,0:13:9.01:0,9,111	0/1:31,0:30:0.57:1,0,178	0/0:28,0:30:1.57:0,2,226	0/1:21,1:21:14.20:14,0,121	1/1:19,13:31:9.49:96,9,0	1/1:19,12:31:8.75:76,9,0	0/0:20,0:20:5.67:0,6,35	0/1:11,0:11:10.97:26,0,11	0/1:60,0:60:56.79:57,0,255	0/1:26,0:26:30.33:30,0,151	0/0:15,0:15:5.99:0,6,48	0/0:40,0:41:7.49:0,7,430	0/0:19,0:19:14.66:0,15,177	0/0:28,0:28:14.96:0,15,121	0/1:16,0:16:9.04:9,0,59	0/1:14,4:18:16.97:17,0,117
chr10	107058089	.	C	CTA	5687.14	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-2.019;DP=566;FS=7.133;HRun=0;HaplotypeScore=70.6469;InbreedingCoeff=0.9984;MQ=91.27;MQ0=0;MQRankSum=-2.542;QD=47.79;ReadPosRankSum=-0.362;VQSLOD=5.5577;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.29:0,87,1244	1/1:0,9:9:27.09:495,27,0	0/0:24,0:24:42.23:0,42,757	0/0:29,0:29:77:0,77,1014	0/0:17,0:17:48.15:0,48,669	0/0:13,0:13:36.12:0,36,515	0/0:22,0:22:66.20:0,66,925	1/1:1,26:27:78.23:1359,78,0	0/0:24,0:24:66.19:0,66,908	0/0:19,0:19:51.16:0,51,714	0/0:11,0:11:27.09:0,27,386	0/0:27,0:27:69.23:0,69,984	0/0:15,0:15:45.15:0,45,644	0/0:24,0:24:72.24:0,72,1027	0/0:28,0:28:81.24:0,81,1120	0/0:20,0:20:57.18:0,57,798	0/0:28,0:28:78.24:0,78,1095	0/0:26,0:26:75.19:0,75,1030	1/1:3,9:12:27.09:482,27,0	1/1:1,16:17:39.13:714,39,0	1/1:0,37:38:99:1814,99,0	0/0:14,0:14:36.11:0,36,497	0/0:8,0:8:21.07:0,21,300	0/0:19,0:19:51.16:0,51,712	0/0:14,0:14:42.14:0,42,601	0/0:21,0:21:63.21:0,63,886	1/1:0,16:16:45.15:824,45,0	0/0:12,0:12:30.10:0,30,429
chr10	107059620	.	T	TC	46.42	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.467;DP=484;FS=0.000;HRun=0;HaplotypeScore=68.4457;InbreedingCoeff=0.7854;MQ=44.83;MQ0=34;MQRankSum=-1.843;QD=5.80;ReadPosRankSum=-1.401;VQSLOD=2.6576;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:71.29:0,71,614	1/1:1,7:8:15.68:135,16,0	0/0:12,0:3:8.25:0,8,54	0/0:11,0:4:3.89:0,4,32	0/0:27,0:27:58.16:0,58,551	0/0:17,0:15:34.99:0,35,336	0/0:19,0:19:49.30:0,49,507	0/0:29,0:27:53.27:0,53,487	0/0:9,0:9:23.84:0,24,212	0/0:18,0:17:49.87:0,50,438	0/0:22,0:20:51.89:0,52,442	0/0:10,0:9:23.75:0,24,200	0/0:19,0:19:56.88:0,57,516	0/0:16,0:16:47.36:0,47,434	0/0:9,0:9:25.30:0,25,263	0/0:17,0:16:41.46:0,41,414	0/0:31,0:30:76.50:0,76,716	0/0:24,0:20:55.78:0,56,573	0/0:18,0:15:41.89:0,42,361	0/0:11,0:11:26.65:0,27,220	0/0:9,0:5:14.85:0,15,103	0/0:19,0:18:34.29:0,34,302	0/0:16,0:15:23.25:0,23,249	0/0:13,0:11:22.57:0,23,241	0/0:12,0:11:32.69:0,33,292	0/0:21,0:20:52.14:0,52,454	0/0:16,0:15:44.91:0,45,440	0/0:20,0:17:45.04:0,45,479
chr10	107060053	.	CAG	C	654.18	PASS	AB=0.978;AC=30;AF=0.600;AN=50;BaseQRankSum=4.154;DP=484;FS=17.790;HRun=0;HaplotypeScore=78.2633;InbreedingCoeff=0.2189;MQ=45.03;MQ0=34;MQRankSum=1.920;QD=1.85;ReadPosRankSum=1.730;VQSLOD=0.1177;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:35:10.01:10,0,139	1/1:6,0:6:5.96:45,6,0	./.	./.	0/0:16,4:18:8.63:0,9,53	0/1:17,0:15:12.26:12,0,79	0/1:28,0:26:3.34:3,0,118	0/0:14,0:13:1.72:0,2,4	1/1:17,0:16:8.55:57,9,0	0/1:22,0:17:3.63:4,0,78	0/0:16,0:13:8.97:0,9,71	0/0:24,0:24:1.24:0,1,129	1/1:10,0:7:2.94:18,3,0	1/1:11,0:11:5.96:44,6,0	0/0:16,0:14:8.83:0,9,62	0/1:12,0:12:6.86:7,0,84	0/1:21,0:18:13.88:14,0,101	0/0:27,0:25:7.59:0,8,176	1/1:9,0:8:2.99:25,3,0	./.	1/1:29,0:25:20.82:148,21,0	0/1:11,3:13:0:0,0,0	1/1:18,0:16:2.94:21,3,0	1/1:38,0:37:38.50:258,38,0	1/1:23,0:21:14.27:91,14,0	0/1:18,0:18:5.01:5,0,31	1/1:10,0:10:2.98:22,3,0	1/1:13,0:8:2.91:22,3,0
chr10	107060704	.	GGTGTGTGTGTGTGTGTGTGTGT	G	75.51	PASS	AB=1.000;AC=3;AF=0.060;AN=50;BaseQRankSum=2.101;DP=590;FS=5.409;HRun=0;HaplotypeScore=256.4956;InbreedingCoeff=0.2760;MQ=59.92;MQ0=42;MQRankSum=-2.287;QD=2.16;ReadPosRankSum=-1.149;VQSLOD=2.2540;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:15:0,15,780	./.	./.	./.	0/0:15,0:13:3.01:0,3,192	0/0:18,0:14:6.08:0,6,858	0/0:26,0:23:5.98:0,6,200	0/0:26,0:26:1.55:0,2,4	0/0:12,0:10:6:0,6,243	0/0:20,0:19:7.26:0,7,199	0/0:6,0:6:3.01:0,3,139	1/1:20,6:25:3.01:151,3,0	0/0:11,0:10:3.01:0,3,214	0/0:25,0:23:12.02:0,12,748	0/0:21,0:20:24.08:0,24,1400	0/0:10,0:9:6.49:0,6,461	0/0:31,0:28:45.58:0,46,2392	0/0:39,0:34:24.03:0,24,1155	0/0:21,0:20:4.78:0,5,96	0/0:14,0:14:9.03:0,9,368	0/0:69,0:65:39.06:0,39,1217	0/0:21,0:19:9.02:0,9,237	0/1:9,0:8:0:0,0,0	0/0:36,0:32:33.08:0,33,2424	0/0:15,0:14:18.01:0,18,752	0/0:13,0:13:4.57:0,5,221	0/0:13,0:11:8.06:0,8,190	0/0:8,0:7:9.03:0,9,440
chr10	107061380	.	GTA	G	7129.30	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=19.230;DP=904;FS=3.212;HRun=0;HaplotypeScore=154.8035;InbreedingCoeff=0.9998;MQ=58.33;MQ0=1;MQRankSum=-8.239;QD=34.78;ReadPosRankSum=-1.230;VQSLOD=6.2897;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,2375	1/1:1,17:18:45.15:684,45,0	0/0:28,0:19:29.79:0,30,698	0/0:37,0:24:33.01:0,33,1090	0/0:22,0:22:66.23:0,66,1273	0/0:22,0:22:66.17:0,66,1172	0/0:32,0:32:93.21:0,93,1660	1/1:1,21:20:51.10:724,51,0	0/0:35,0:35:99:0,99,1876	0/0:51,0:51:99:0,153,2810	0/0:23,0:23:60.21:0,60,1157	1/1:0,44:44:99:1734,114,0	0/0:36,0:36:99:0,108,2013	0/0:55,0:55:99:0,165,3008	0/0:44,0:44:99:0,129,2403	0/0:37,0:37:99:0,111,2066	0/0:31,0:31:90.28:0,90,1698	0/0:18,0:18:43.96:0,44,847	1/1:3,23:25:71.77:944,72,0	1/1:1,28:29:75.17:1106,75,0	1/1:3,43:46:81.19:1207,81,0	0/0:28,0:28:84.26:0,84,1555	0/0:18,0:18:51.16:0,51,951	0/0:31,0:31:75.04:0,75,1398	0/0:33,0:33:96.27:0,96,1720	0/0:55,0:55:99:0,163,3036	1/1:0,20:20:48.16:730,48,0	0/0:16,0:16:48.16:0,48,926
chr10	107061470	.	ATGTATGTT	A	2785.79	PASS	AB=0.731;AC=12;AF=0.214;AN=56;BaseQRankSum=6.171;DP=868;FS=16.785;HRun=0;HaplotypeScore=220.2848;InbreedingCoeff=0.6308;MQ=52.36;MQ0=25;MQRankSum=-7.186;QD=17.86;ReadPosRankSum=-1.325;VQSLOD=1.2541;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,131,4220	1/1:3,2:5:2.84:46,3,0	0/0:38,0:11:14.84:0,15,197	0/0:39,0:9:12:0,12,161	0/0:32,0:32:96.33:0,96,3700	0/0:25,0:25:66.19:0,66,2461	0/0:26,0:26:67.08:0,67,2503	0/1:35,10:33:99:980,0,672	0/0:30,0:30:87.30:0,87,3268	0/0:37,0:36:99:0,99,3900	0/0:24,0:24:72.23:0,72,2670	1/1:4,18:21:6.02:164,6,0	0/0:26,0:26:75.26:0,75,2918	0/0:37,0:37:99:0,99,3926	0/0:39,0:39:90.81:0,91,3514	0/0:30,0:30:81.28:0,81,3302	0/0:41,0:41:99:0,100,3936	0/0:32,0:32:93.28:0,93,3641	0/1:8,10:14:99:541,0,145	1/1:7,10:17:1.52:72,2,0	1/1:25,3:28:5.97:171,6,0	0/0:32,0:32:96.32:0,96,3461	0/0:23,0:23:69.24:0,69,2672	0/0:43,0:43:99:0,105,3620	0/0:31,0:31:81.17:0,81,3090	0/0:48,0:48:99:0,132,5122	1/1:6,15:21:35.61:967,36,0	0/0:27,0:27:72.25:0,72,2909
chr10	107061478	.	T	TA	42.29	PASS	AB=0.895;AC=6;AF=0.107;AN=56;BaseQRankSum=5.748;DP=903;FS=2.312;HRun=0;HaplotypeScore=129.1218;InbreedingCoeff=0.2223;MQ=52.29;MQ0=33;MQRankSum=-2.407;QD=0.34;ReadPosRankSum=-3.067;VQSLOD=1.8842;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,134,1693	1/1:6,1:7:5.43:39,5,0	0/0:40,0:6:15:0,15,173	0/0:39,0:8:14.98:0,15,152	0/0:34,0:34:99:0,99,1384	0/0:27,0:27:78.21:0,78,1053	0/0:27,0:27:75.60:0,76,985	0/1:35,6:30:34.45:34,0,277	0/0:34,0:34:99:0,99,1369	0/0:37,0:36:99:0,105,1466	0/0:28,0:28:81.26:0,81,1115	0/0:19,0:18:4.07:0,4,13	0/0:28,0:28:78.25:0,78,1073	0/0:43,0:43:99:0,123,1690	0/0:41,0:41:99:0,114,1551	0/0:32,0:32:96.31:0,96,1325	0/0:38,0:38:99:0,111,1495	0/0:38,0:38:99:0,111,1475	0/1:22,0:14:14.94:15,0,165	0/0:14,2:16:2.55:0,3,13	0/1:25,9:34:5.39:56,0,5	0/0:34,0:34:99:0,99,1366	0/0:25,0:25:75.25:0,75,1048	0/0:46,0:46:99:0,120,1595	0/0:29,0:29:84.24:0,84,1152	0/0:47,0:47:99:0,141,1958	0/1:20,2:22:18.57:19,0,57	0/0:25,0:25:72.24:0,72,1007
chr10	107061863	.	T	TCCCCCCGAGGACCGTC	14690.21	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-7.060;DP=607;FS=30.498;HRun=0;HaplotypeScore=235.5250;InbreedingCoeff=0.9854;MQ=80.25;MQ0=0;MQRankSum=-10.314;QD=99.93;ReadPosRankSum=-1.829;VQSLOD=3.1550;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:72.28:0,72,3357	1/1:0,3:5:9.03:668,9,0	0/0:26,0:26:60.24:0,60,2746	0/0:18,0:18:51.17:0,51,1814	0/0:12,0:12:27.08:0,27,1112	0/0:16,0:16:42.14:0,42,1680	0/0:31,0:31:84.27:0,84,3334	1/1:12,1:33:90.31:3764,90,0	0/0:21,0:21:63.22:0,63,2707	0/0:29,0:29:72.20:0,72,2921	0/0:18,0:18:33.11:0,33,1268	1/1:7,5:20:36.12:2086,36,0	0/0:13,0:13:39.12:0,39,1341	0/0:23,0:23:63.20:0,63,2463	0/0:24,0:24:72.21:0,72,3046	0/0:18,0:18:51.17:0,51,2092	0/0:39,0:39:99:0,105,4376	0/0:24,0:24:69.24:0,69,2843	1/1:7,3:19:48.14:2204,48,0	1/1:4,5:14:15.05:1180,15,0	1/1:6,5:30:21.07:1398,21,0	0/0:19,0:19:39.06:0,39,1111	0/0:16,0:16:36.12:0,36,1295	0/0:26,0:26:72.25:0,72,3339	0/0:21,0:21:60.21:0,60,2310	0/0:20,0:20:48.16:0,48,1861	1/1:3,13:26:45.15:3391,45,0	0/0:12,0:12:36.12:0,36,1611
chr10	107062199	.	T	TG	787.33	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.840;DP=628;FS=8.375;HRun=6;HaplotypeScore=68.9182;InbreedingCoeff=0.9914;MQ=87.01;MQ0=0;MQRankSum=-2.864;QD=26.24;ReadPosRankSum=1.117;VQSLOD=3.7571;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,147,1499	1/1:0,7:7:15.05:189,15,0	0/0:22,0:22:51.10:0,51,514	0/0:22,0:22:33.07:0,33,336	0/0:17,0:17:42.09:0,42,427	0/0:24,0:23:57.12:0,57,581	0/0:25,0:25:69.15:0,69,703	0/0:28,0:28:63.06:0,63,619	0/0:19,0:19:45.08:0,45,452	0/0:22,0:22:57.09:0,57,566	0/0:18,0:18:48.10:0,48,483	1/1:1,22:23:57.18:717,57,0	0/0:13,0:13:36.08:0,36,367	0/0:20,0:20:57.11:0,57,574	0/0:18,0:18:45.10:0,45,459	0/0:24,0:24:72.14:0,72,722	0/0:32,0:32:84.12:0,84,836	0/0:19,0:19:54.08:0,54,540	0/0:30,0:30:78.17:0,78,794	0/0:17,0:17:33.07:0,33,336	0/0:30,0:30:84.19:0,84,856	0/0:23,0:23:63.11:0,63,628	0/0:21,0:21:57.13:0,57,581	0/0:29,0:29:84.17:0,84,849	0/0:16,0:15:45.10:0,45,459	0/0:16,0:16:48.11:0,48,490	0/0:29,0:29:78.17:0,78,793	0/0:15,0:15:45.07:0,45,450
chr10	107064083	.	C	CG	1478.52	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=-0.410;DP=385;FS=8.022;HRun=1;HaplotypeScore=60.7341;InbreedingCoeff=0.8632;MQ=46.75;MQ0=17;MQRankSum=-5.371;QD=22.40;ReadPosRankSum=-0.346;VQSLOD=2.8739;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:66.49:0,66,744	./.	0/0:7,0:2:2.93:0,3,19	0/0:5,0:2:1.82:0,2,5	0/0:13,0:13:18.04:0,18,210	0/0:12,0:11:29.98:0,30,320	0/0:17,0:17:42:0,42,477	1/1:4,19:23:51.69:687,52,0	0/0:12,0:12:24.06:0,24,283	0/0:16,0:15:36.04:0,36,413	0/0:10,0:10:18.06:0,18,230	0/0:12,0:12:30.07:0,30,359	0/0:8,0:8:21.02:0,21,207	0/0:9,0:9:27.03:0,27,314	0/0:18,0:18:38.91:0,39,442	0/0:11,0:11:26.97:0,27,323	0/0:26,0:25:45.04:0,45,560	0/0:23,0:22:57.09:0,57,668	1/1:1,10:10:24.08:355,24,0	1/1:2,15:17:21.07:309,21,0	1/1:4,4:7:6.01:72,6,0	0/0:9,0:9:18.05:0,18,217	0/0:13,0:13:17.94:0,18,218	0/0:16,0:16:30.09:0,30,370	0/0:15,0:14:21.05:0,21,247	0/0:19,0:17:39.11:0,39,479	1/1:2,5:6:15.05:220,15,0	0/0:12,0:5:6.02:0,6,77
chr10	107064098	.	CA	C	1203.33	PASS	AB=0.781;AC=35;AF=0.625;AN=56;BaseQRankSum=-3.796;DP=501;FS=1.907;HRun=17;HaplotypeScore=66.5732;InbreedingCoeff=0.2414;MQ=49.78;MQ0=31;MQRankSum=3.249;QD=2.98;ReadPosRankSum=1.962;VQSLOD=-0.5513;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,18:40:12.60:115,0,13	0/0:3,0:3:8.97:0,9,71	0/1:20,1:6:4.74:5,0,25	0/1:19,0:7:15.02:15,0,27	0/1:12,8:19:21.91:53,0,22	0/1:7,4:11:4.48:66,0,4	1/1:13,10:24:10.77:49,11,0	0/0:29,0:29:17.07:0,17,209	1/1:8,2:10:1.65:39,2,0	1/1:10,8:18:27.18:140,27,0	1/1:5,7:12:16.74:90,17,0	1/1:12,2:15:24.02:121,24,0	0/1:3,1:5:8.03:8,0,27	1/1:13,2:15:11.16:48,11,0	1/1:9,10:19:11.17:66,11,0	1/1:6,6:12:5.37:33,5,0	1/1:16,14:30:21.96:121,22,0	0/1:25,5:30:5.09:109,0,5	0/0:18,0:17:18.50:0,19,120	0/0:15,0:16:26.61:0,27,178	0/0:11,0:14:23.71:0,24,139	1/1:8,0:8:2.48:12,2,0	0/1:9,1:14:14.50:14,0,16	1/1:9,11:21:1.28:67,1,0	0/1:8,6:13:20.18:66,0,20	1/1:11,8:15:1.04:80,1,0	0/0:7,0:10:22.91:0,23,132	1/1:8,8:9:11.66:67,12,0
chr10	107064586	.	AAAG	A	911.91	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=12.115;DP=578;FS=1.743;HRun=0;HaplotypeScore=114.0915;InbreedingCoeff=0.6608;MQ=53.92;MQ0=21;MQRankSum=-9.808;QD=8.14;ReadPosRankSum=-3.342;VQSLOD=2.6004;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:57.95:0,58,1192	1/1:8,0:8:12.86:51,13,0	0/0:49,0:10:8.17:0,8,165	0/0:80,0:23:0.89:0,1,195	0/0:15,0:15:36.12:0,36,777	0/0:17,0:16:46.71:0,47,988	0/1:13,0:14:10.03:10,0,766	1/1:21,7:25:51.66:516,52,0	0/0:13,0:13:39.13:0,39,841	0/0:22,0:21:57.19:0,57,1180	0/0:15,0:15:42.13:0,42,887	0/0:17,0:17:48.08:0,48,827	0/0:12,0:12:33.11:0,33,734	0/0:14,0:14:27.08:0,27,544	0/0:18,0:18:51.16:0,51,1026	0/0:10,0:10:30.09:0,30,600	0/0:32,0:32:84.18:0,84,1680	0/0:25,0:24:66.22:0,66,1382	1/1:22,1:20:19.24:241,19,0	1/1:10,2:10:2.23:64,2,0	1/1:5,2:7:0.23:76,0,0	0/0:14,0:14:41.80:0,42,740	0/0:16,0:16:46.40:0,46,944	0/0:19,0:19:39.65:0,40,947	0/0:22,0:22:59.99:0,60,1150	0/0:17,0:17:51.17:0,51,1058	0/1:20,0:18:4.70:113,0,5	0/0:15,0:15:39.08:0,39,741
chr10	107064594	.	G	GA	2008.65	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=13.276;DP=560;FS=13.355;HRun=4;HaplotypeScore=98.2571;InbreedingCoeff=0.8957;MQ=55.24;MQ0=17;MQRankSum=-11.384;QD=10.92;ReadPosRankSum=-1.621;VQSLOD=0.5980;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:65.66:0,66,722	1/1:0,6:7:17.95:151,18,0	0/0:42,0:10:12.75:0,13,184	0/1:70,0:21:20.15:20,0,207	0/0:14,0:14:36.10:0,36,408	0/0:17,0:16:39.75:0,40,495	0/0:17,0:18:45.57:0,46,491	1/1:10,17:24:51.02:522,51,0	0/0:14,0:14:39.11:0,39,441	0/0:21,0:21:54.15:0,54,611	0/0:14,0:14:39.11:0,39,441	1/1:9,8:18:42.01:510,42,0	0/0:12,0:12:36.10:0,36,407	0/0:16,0:16:27.07:0,27,298	0/0:18,0:18:54.02:0,54,590	0/0:12,0:12:33.08:0,33,365	0/0:30,0:30:84.21:0,84,936	0/0:23,0:22:60.16:0,60,668	1/1:9,17:23:51.64:474,52,0	1/1:2,8:9:17.79:149,18,0	1/1:4,4:8:11.58:87,12,0	0/0:13,0:13:38.32:0,38,415	0/0:16,0:16:44.34:0,44,483	0/0:16,0:16:32.91:0,33,434	0/0:21,0:21:57.16:0,57,645	0/0:18,0:18:51.08:0,51,546	1/1:7,11:16:34.71:294,35,0	0/0:17,0:17:45.13:0,45,510
chr10	107064603	.	GA	G	194.06	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.132;DP=531;FS=6.437;HRun=10;HaplotypeScore=98.3629;InbreedingCoeff=0.6610;MQ=57.97;MQ0=12;MQRankSum=-1.075;QD=12.94;ReadPosRankSum=1.134;VQSLOD=3.4604;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:51.13:0,51,557	0/0:7,0:7:11.52:0,12,58	0/0:38,0:11:23.49:0,23,197	0/0:58,0:19:29.94:0,30,263	0/0:18,0:18:48.11:0,48,520	0/0:17,0:16:36.10:0,36,397	0/0:18,0:18:48.13:0,48,531	0/0:25,0:23:44.98:0,45,195	0/0:11,1:12:10:0,10,324	0/0:22,0:22:45.03:0,45,474	0/0:9,1:12:6.70:0,7,268	1/1:7,8:15:36.26:288,36,0	0/0:10,0:10:27.07:0,27,299	0/0:17,0:17:30.06:0,30,318	0/0:20,0:20:31.25:0,31,514	0/0:10,0:10:30.07:0,30,324	0/0:29,0:29:78.19:0,78,852	0/0:25,0:25:50.95:0,51,534	0/0:23,0:22:54.48:0,54,242	0/0:10,0:10:17.50:0,17,71	0/0:7,0:7:7.79:0,8,32	0/0:12,0:13:29.91:0,30,313	0/0:15,0:15:42.11:0,42,464	0/0:14,1:15:1.02:0,1,239	0/0:19,0:19:54.14:0,54,592	0/0:17,0:17:42.11:0,42,465	0/0:15,0:14:33.55:0,34,152	0/0:20,0:20:54.15:0,54,597
chr10	107064607	.	A	AAC	3496.18	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.841;DP=525;FS=2.164;HRun=0;HaplotypeScore=98.8459;InbreedingCoeff=0.9650;MQ=60.72;MQ0=9;MQRankSum=-10.294;QD=39.73;ReadPosRankSum=-1.580;VQSLOD=5.1365;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.13:0,57,796	1/1:1,6:7:18.03:295,18,0	0/0:36,0:12:20.24:0,20,302	0/0:52,0:19:33.07:0,33,390	0/0:18,0:18:51.15:0,51,732	0/0:20,0:19:51.10:0,51,668	0/0:19,0:19:51.16:0,51,750	1/1:3,21:23:63.19:1040,63,0	0/0:13,0:13:39.10:0,39,549	0/0:19,0:19:45.15:0,45,656	0/0:12,0:12:32.27:0,32,407	0/0:15,0:15:41.95:0,42,375	0/0:11,0:11:30.09:0,30,435	0/0:18,0:18:42.09:0,42,527	0/0:21,0:21:63.15:0,63,820	0/0:12,0:12:36.09:0,36,488	0/0:30,0:30:87.26:0,87,1254	0/0:24,0:23:62.72:0,63,810	1/1:4,20:25:45.31:989,45,0	1/1:2,8:10:5.09:334,5,0	1/1:2,5:7:12.04:176,12,0	0/0:13,0:13:38.56:0,39,486	0/0:14,0:14:42.14:0,42,635	0/0:12,0:12:33.04:0,33,434	0/0:19,0:19:57.18:0,57,831	0/0:17,0:17:48.15:0,48,689	1/1:4,11:14:38.22:663,38,0	0/0:20,0:20:54.18:0,54,816
chr10	107067128	.	T	TC	790.36	PASS	AC=10;AF=0.200;AN=50;BaseQRankSum=5.521;DP=527;FS=13.483;HRun=4;HaplotypeScore=57.4989;InbreedingCoeff=0.8551;MQ=43.54;MQ0=72;MQRankSum=-7.148;QD=14.37;ReadPosRankSum=-1.262;VQSLOD=1.4983;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:45.12:0,45,510	1/1:0,7:7:3.01:37,3,0	./.	./.	0/0:17,0:14:5.59:0,6,68	0/0:15,1:15:18.05:0,18,204	0/0:33,0:29:35.74:0,36,397	1/1:8,8:13:30.06:382,30,0	0/0:21,0:21:39.10:0,39,433	0/0:25,0:20:45.12:0,45,509	0/0:22,0:15:17.55:0,18,203	0/0:24,0:21:45.13:0,45,510	0/0:14,0:14:30.09:0,30,340	0/0:27,0:26:54.15:0,54,612	0/0:19,0:18:48.14:0,48,544	0/0:22,0:22:54.13:0,54,600	0/0:28,0:28:51.11:0,51,565	0/0:34,0:33:63.18:0,63,713	1/1:3,6:8:18.05:240,18,0	./.	1/1:5,8:11:9.03:123,9,0	0/0:12,0:9:24.07:0,24,272	0/0:16,0:13:12.03:0,12,136	0/0:19,0:19:42.12:0,42,476	0/0:17,0:14:24.05:0,24,261	0/0:20,0:17:42.12:0,42,475	1/1:1,9:6:12.04:164,12,0	0/0:5,0:4:3.01:0,3,34
chr10	107069019	.	T	TG	1371.93	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=0.764;DP=541;FS=8.141;HRun=0;HaplotypeScore=71.2451;InbreedingCoeff=0.8238;MQ=54.76;MQ0=15;MQRankSum=1.450;QD=11.06;ReadPosRankSum=4.313;VQSLOD=3.7475;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:89.87:0,90,669	1/1:7,0:7:17.42:116,17,0	0/0:50,0:13:13.63:0,14,173	0/0:29,0:2:3.01:0,3,36	0/0:17,0:17:41.25:0,41,295	0/0:18,0:18:49.96:0,50,408	0/0:7,0:7:19.93:0,20,168	1/1:6,16:21:48.79:328,49,0	0/0:12,0:12:28.53:0,29,240	0/0:24,0:24:61.21:0,61,458	0/0:11,0:11:31.16:0,31,229	0/0:9,0:9:3.22:0,3,61	0/0:15,0:14:36.62:0,37,282	0/0:16,0:16:35.74:0,36,257	0/0:20,0:20:53.80:0,54,419	0/0:13,0:12:30.43:0,30,254	0/0:31,0:30:61.09:0,61,449	0/0:21,0:20:49.07:0,49,432	0/1:30,0:30:8.78:352,0,9	1/1:16,0:15:19.46:204,19,0	1/1:27,0:27:24.61:286,25,0	0/0:8,0:8:22.18:0,22,177	0/0:13,0:12:37.87:0,38,288	0/0:24,0:24:59.47:0,59,469	0/0:12,0:12:31.25:0,31,247	0/0:21,0:21:61.11:0,61,486	1/1:21,1:22:37.38:261,37,0	0/0:7,0:7:20.80:0,21,157
chr10	107069852	.	TGAAGTCGGGAGG	T	734.32	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.727;DP=709;FS=3.220;HRun=0;HaplotypeScore=232.3809;InbreedingCoeff=0.9969;MQ=93.71;MQ0=0;MQRankSum=-4.822;QD=66.76;ReadPosRankSum=1.137;VQSLOD=3.1527;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:65:99:0,196,11026	1/1:0,11:11:24.08:828,24,0	0/0:32,0:32:93.32:0,93,4773	0/0:37,0:36:99:0,102,5090	0/0:22,0:22:66.23:0,66,3604	0/0:18,0:18:48.16:0,48,2884	0/0:25,0:25:75.26:0,75,4458	0/0:40,0:40:99:0,108,5978	0/0:25,0:25:66.22:0,66,3797	0/0:24,0:24:66.22:0,66,3746	0/0:15,0:15:42.13:0,42,2218	0/0:18,0:18:54.19:0,54,3077	0/0:14,0:14:42.14:0,42,2356	0/0:11,0:11:30.10:0,30,1746	0/0:26,0:26:78.25:0,78,4031	0/0:18,0:18:54.19:0,54,3249	0/0:39,0:39:99:0,114,6331	0/0:23,0:23:63.18:0,63,3545	0/0:27,0:27:78.26:0,78,4269	0/0:22,0:22:66.23:0,66,3541	0/0:33,0:33:96.33:0,96,5375	0/0:24,0:24:66.23:0,66,3897	0/0:17,0:17:45.14:0,45,2305	0/0:37,0:37:99:0,108,6160	0/0:20,0:20:51.17:0,51,3027	0/0:25,0:25:75.26:0,75,4402	0/0:31,0:31:90.29:0,90,5015	0/0:10,0:10:30.10:0,30,1716
chr10	107071089	.	TATCC	T	1906.44	PASS	AB=0.905;AC=12;AF=0.231;AN=52;BaseQRankSum=6.548;DP=815;FS=2.794;HRun=0;HaplotypeScore=125.9273;InbreedingCoeff=0.8009;MQ=53.84;MQ0=46;MQRankSum=0.980;QD=8.71;ReadPosRankSum=2.787;VQSLOD=2.9923;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:57:55.74:0,56,2014	0/0:12,0:12:4.82:0,5,32	./.	./.	0/0:18,0:17:21.07:0,21,472	0/0:17,0:16:27.09:0,27,628	0/1:35,0:32:16.20:16,0,557	0/0:45,0:36:26.37:0,26,193	0/0:35,0:34:81.26:0,81,1835	0/0:39,0:30:42.57:0,43,804	0/0:13,0:12:12.04:0,12,281	1/1:24,13:36:39.13:598,39,0	1/1:13,16:28:24.08:370,24,0	1/1:17,10:26:18.06:265,18,0	0/0:24,0:24:30.10:0,30,648	0/0:24,0:23:33.11:0,33,763	0/0:45,4:49:19.90:0,20,1309	0/0:30,0:28:48.12:0,48,979	0/0:31,0:29:12.04:0,12,225	0/0:16,0:14:9.02:0,9,160	0/0:51,0:45:35.56:0,36,598	1/1:21,11:31:20.90:323,21,0	0/1:13,4:16:0:0,0,0	1/1:18,24:42:29.38:503,29,0	0/0:5,0:16:15.05:0,15,261	0/0:30,0:27:27.09:0,27,615	0/0:28,0:28:38.56:0,39,649	0/0:14,0:14:18.04:0,18,346
chr10	107071883	.	TA	T	1466.28	PASS	AB=0.950;AC=15;AF=0.268;AN=56;BaseQRankSum=7.527;DP=422;FS=3.153;HRun=11;HaplotypeScore=49.0072;InbreedingCoeff=0.8741;MQ=83.94;MQ0=1;MQRankSum=-1.115;QD=13.21;ReadPosRankSum=-2.604;VQSLOD=2.7565;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:55.94:0,56,573	1/1:2,8:10:20.97:172,21,0	0/0:38,0:28:30.83:0,31,315	0/1:18,1:13:14.30:14,0,32	0/0:27,0:27:63.13:0,63,657	0/0:23,0:23:51.13:0,51,544	0/0:9,0:9:18.05:0,18,192	1/1:7,21:28:59.86:485,60,0	0/0:12,0:12:30.08:0,30,320	0/0:11,0:11:27.06:0,27,282	0/0:13,0:13:33.01:0,33,331	1/1:1,7:9:23.01:178,23,0	0/0:11,0:11:15.95:0,16,180	0/0:9,0:9:15.03:0,15,153	0/0:16,0:16:36.09:0,36,384	0/0:10,0:10:18.05:0,18,192	0/0:23,0:23:54.11:0,54,565	0/0:25,0:25:71.99:0,72,730	1/1:3,11:15:34.95:270,35,0	1/1:1,8:9:23.97:197,24,0	1/1:2,2:4:5.99:49,6,0	0/0:6,0:6:18.02:0,18,177	0/0:9,0:9:17.78:0,18,172	0/0:4,0:4:12.03:0,12,128	0/0:25,0:25:69.16:0,69,728	0/0:15,0:15:39.08:0,39,404	1/1:3,14:17:35.96:296,36,0	0/0:6,0:6:18.05:0,18,192
chr10	107072544	.	GC	G	2756	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.410;DP=578;FS=1.893;HRun=6;HaplotypeScore=71.6124;InbreedingCoeff=0.9926;MQ=78.57;MQ0=5;MQRankSum=-3.279;QD=22.05;ReadPosRankSum=0.778;VQSLOD=2.9637;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,1:53:99:0,138,1801	1/1:0,6:5:12.03:129,12,0	0/0:20,0:18:36.10:0,36,516	0/0:28,0:26:45.72:0,46,758	0/0:19,0:19:51.15:0,51,655	0/0:12,0:12:36.12:0,36,474	0/0:26,0:26:72.17:0,72,912	1/1:4,13:15:36.07:377,36,0	0/0:26,1:26:75.23:0,75,972	0/0:18,0:18:51.17:0,51,671	0/0:11,0:11:30.08:0,30,379	1/1:2,23:24:54.13:580,54,0	0/0:16,0:16:39.11:0,39,494	0/0:15,1:15:42.14:0,42,553	0/0:16,0:16:45.15:0,45,592	0/0:8,1:8:24.07:0,24,303	0/0:52,0:52:99:0,138,1796	0/0:29,0:29:75.24:0,75,984	1/1:1,7:7:21.05:225,21,0	1/1:1,16:13:33.08:354,33,0	1/1:2,36:38:87.21:934,87,0	0/0:12,0:12:30.09:0,30,381	0/0:10,0:10:30.08:0,30,378	0/0:26,1:26:66.21:0,66,868	0/0:14,0:14:39.11:0,39,497	0/0:25,0:25:66.19:0,66,847	1/1:1,13:13:33.08:355,33,0	0/0:12,0:12:27.09:0,27,355
chr10	107072734	.	A	AT	5039.69	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-12.894;DP=499;FS=3.495;HRun=0;HaplotypeScore=44.3842;InbreedingCoeff=0.9941;MQ=74.92;MQ0=0;MQRankSum=-2.800;QD=41.65;ReadPosRankSum=-0.695;VQSLOD=4.8124;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,102,1406	1/1:0,7:7:18.06:282,18,0	0/0:13,0:13:32.91:0,33,386	0/0:8,0:7:16.87:0,17,214	0/0:22,0:22:63.20:0,63,863	0/0:13,0:13:36.12:0,36,503	0/0:18,0:18:54.17:0,54,739	1/1:0,31:31:93.25:1323,93,0	0/0:15,0:15:45.14:0,45,614	0/0:16,0:16:48.13:0,48,625	0/0:21,0:21:63.21:0,63,879	1/1:0,18:18:45.15:704,45,0	0/0:10,0:10:24.08:0,24,336	0/0:11,0:11:30.09:0,30,403	0/0:12,0:12:30.10:0,30,419	0/0:9,0:9:24.07:0,24,319	0/0:38,0:38:99:0,99,1352	0/0:27,0:27:78.25:0,78,1072	1/1:0,16:16:48.15:725,48,0	1/1:0,20:20:57.19:881,57,0	1/1:0,11:11:24.08:375,24,0	0/0:9,0:9:24.07:0,24,318	0/0:22,0:22:63.20:0,63,863	0/0:17,0:17:39.13:0,39,545	0/0:29,0:29:81.26:0,81,1104	0/0:22,0:22:66.21:0,66,890	1/1:0,18:18:48.16:750,48,0	0/0:7,0:7:21.07:0,21,294
chr10	107076306	.	AGT	A	4256.14	PASS	AB=0.877;AC=15;AF=0.268;AN=56;BaseQRankSum=13.147;DP=960;FS=0.720;HRun=0;HaplotypeScore=123.1674;InbreedingCoeff=0.7151;MQ=65.89;MQ0=9;MQRankSum=0.341;QD=14.88;ReadPosRankSum=-1.322;VQSLOD=4.4939;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,1:43:54.32:0,54,1319	1/1:2,6:9:14.88:158,15,0	0/0:40,0:26:21.07:0,21,331	0/0:28,0:18:13.05:0,13,340	0/1:24,4:28:53.76:54,0,617	0/1:19,2:21:35.81:36,0,441	0/0:50,1:51:60.28:0,60,1337	1/1:11,22:33:63.17:733,63,0	0/0:37,3:40:33.74:0,34,1009	0/0:41,0:41:89.44:0,89,1310	0/0:22,0:22:48.16:0,48,765	0/0:42,0:42:88.83:0,89,1328	0/0:33,0:33:75.22:0,75,1131	0/0:34,2:36:51.33:0,51,1300	0/0:31,1:32:36.28:0,36,1059	0/0:43,1:44:69.38:0,69,1591	0/0:29,1:30:25.48:0,25,875	0/0:33,1:34:42.17:0,42,1057	1/1:14,8:20:14.05:296,14,0	1/1:9,23:31:60.14:703,60,0	1/1:19,69:88:99:1582,132,0	0/0:31,0:32:58.06:0,58,1016	0/0:29,0:29:75.26:0,75,1186	0/0:43,0:43:99:0,108,1717	0/1:22,5:27:47.73:48,0,730	0/0:31,0:31:81.28:0,81,1268	1/1:5,20:24:56.83:647,57,0	0/0:23,0:23:57.18:0,57,888
chr10	107077445	.	AAC	A	441.72	PASS	AB=0.975;AC=9;AF=0.161;AN=56;BaseQRankSum=9.942;DP=659;FS=2.883;HRun=0;HaplotypeScore=102.8263;InbreedingCoeff=0.3238;MQ=75.59;MQ0=3;MQRankSum=0.331;QD=3.53;ReadPosRankSum=-2.713;VQSLOD=2.0916;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1970	1/1:8,0:8:10.59:133,11,0	0/0:27,0:24:69.19:0,69,1050	0/0:24,0:22:56.86:0,57,743	0/0:24,0:24:72.25:0,72,1277	0/0:22,0:22:63.21:0,63,1135	0/0:21,0:21:60.18:0,60,1038	0/1:19,2:18:38.19:146,0,38	0/0:33,0:33:99:0,99,1766	0/0:43,0:42:99:0,123,2153	0/0:24,0:24:72.18:0,72,1206	0/1:15,0:15:49.45:94,0,49	0/0:20,0:20:57.16:0,57,967	0/0:18,0:18:54.15:0,54,925	0/0:23,0:23:69.24:0,69,1226	0/0:21,0:21:63.22:0,63,1142	0/0:29,0:29:87.25:0,87,1526	0/0:12,0:12:36.07:0,36,592	0/1:13,0:13:18.35:45,0,18	0/1:23,1:22:41.99:42,0,69	1/1:14,1:15:20.57:106,21,0	0/0:28,0:28:81.20:0,81,1332	0/0:23,0:23:59.63:0,60,1067	0/0:34,0:33:99:0,102,1775	0/0:28,0:28:84.29:0,84,1510	0/0:25,0:25:75.24:0,75,1302	0/1:29,0:29:25.75:26,0,75	0/0:14,0:14:42.14:0,42,725
chr10	107077446	.	AC	A	2772.21	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.640;DP=656;FS=2.790;HRun=1;HaplotypeScore=81.6003;InbreedingCoeff=0.9894;MQ=75.69;MQ0=3;MQRankSum=-5.553;QD=22.54;ReadPosRankSum=-1.528;VQSLOD=3.3450;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1570	1/1:0,8:8:11.98:111,12,0	0/0:27,0:24:68.73:0,69,848	0/0:25,0:22:48.81:0,49,602	0/0:24,0:24:72.20:0,72,992	0/0:22,0:22:66.21:0,66,940	0/0:20,0:20:60.18:0,60,839	1/1:9,12:18:50.83:488,51,0	0/0:35,0:35:99:0,105,1453	0/0:42,0:41:99:0,123,1745	0/0:24,0:24:72.16:0,72,966	1/1:15,0:15:12.71:166,13,0	0/0:20,0:20:60.14:0,60,798	0/0:18,0:18:54.14:0,54,749	0/0:23,0:23:69.20:0,69,966	0/0:21,0:21:63.21:0,63,919	0/0:29,0:29:87.25:0,87,1225	0/0:13,0:13:36.07:0,36,483	1/1:10,3:13:35.91:368,36,0	1/1:20,2:20:55.73:494,56,0	1/1:11,4:15:43.99:464,44,0	0/0:27,0:27:81.19:0,81,1082	0/0:22,0:22:59.02:0,59,845	0/0:34,0:33:99:0,102,1425	0/0:28,0:28:84.25:0,84,1190	0/0:25,0:25:75.22:0,75,1046	1/1:20,9:29:86.63:878,87,0	0/0:14,0:14:42.11:0,42,572
chr10	107077452	.	C	CA	2585.88	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.933;DP=653;FS=3.711;HRun=5;HaplotypeScore=88.6452;InbreedingCoeff=0.9575;MQ=70.02;MQ0=3;MQRankSum=-3.994;QD=24.17;ReadPosRankSum=-1.857;VQSLOD=1.9365;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,1128	0/0:13,0:13:7.23:0,7,19	0/0:24,0:20:6.48:0,6,273	0/0:25,0:22:20.11:0,20,285	0/0:25,0:25:69.16:0,69,732	0/0:23,0:23:63.14:0,63,668	0/0:20,0:20:57.14:0,57,612	1/1:8,13:18:38.65:374,39,0	0/0:35,0:35:99:0,99,1048	0/0:41,0:40:99:0,111,1192	0/0:21,0:21:60.15:0,60,644	0/0:15,0:15:21.18:0,21,105	0/0:17,0:17:48.12:0,48,516	0/0:16,0:16:42.11:0,42,451	0/0:21,0:21:51.12:0,51,548	0/0:21,0:21:57.14:0,57,613	0/0:28,0:28:78.19:0,78,838	0/0:14,0:14:33.04:0,33,342	1/1:9,4:13:34.70:351,35,0	1/1:20,4:22:62:593,62,0	1/1:12,4:16:40.48:475,40,0	0/0:25,0:25:72.18:0,72,773	0/0:24,0:24:69.16:0,69,738	0/0:34,0:33:99:0,102,1075	0/0:28,0:28:84.19:0,84,892	0/0:23,0:23:57.14:0,57,613	1/1:24,9:33:95.35:969,95,0	0/0:15,0:15:45.11:0,45,482
chr10	107077727	.	TAC	T	2128.19	PASS	AB=0.749;AC=8;AF=0.143;AN=56;BaseQRankSum=8.947;DP=1306;FS=38.083;HRun=0;HaplotypeScore=255.7337;InbreedingCoeff=0.6985;MQ=48.79;MQ0=34;MQRankSum=-6.521;QD=13.38;ReadPosRankSum=-2.173;VQSLOD=1.9824;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:62:99:0,109,1815	0/0:13,0:13:24:0,24,313	0/0:41,0:6:17.42:0,17,239	0/0:42,0:6:5.92:0,6,81	0/0:39,0:38:72.12:0,72,1140	0/0:38,0:41:85.20:0,85,1464	0/0:50,0:54:99:0,99,1601	0/1:41,9:36:99:410,0,148	0/0:57,0:60:99:0,117,1993	0/0:89,0:86:99:0,183,3181	0/0:30,0:31:39.13:0,39,668	0/0:47,0:46:60.20:0,60,1038	0/0:53,0:55:99:0,139,2083	0/0:58,0:64:99:0,126,2027	0/0:87,0:88:99:0,164,2658	0/0:60,0:65:99:0,129,2041	0/0:42,0:44:75.02:0,75,1286	0/0:39,0:41:56.65:0,57,1228	0/1:5,6:8:9.96:127,0,10	1/1:7,15:18:30.08:380,30,0	1/1:21,29:43:61.07:776,61,0	0/0:36,0:36:93.22:0,93,1534	0/0:35,0:35:71.72:0,72,1165	0/0:62,0:66:99:0,123,2051	0/0:30,0:32:36.38:0,36,677	0/0:56,0:59:99:0,165,2495	1/1:5,20:22:45.15:589,45,0	0/0:28,1:29:77.19:0,77,1197
chr10	107077752	.	TAC	T	653.89	PASS	AB=0.771;AC=9;AF=0.161;AN=56;BaseQRankSum=9.173;DP=1531;FS=10.078;HRun=0;HaplotypeScore=265.4196;InbreedingCoeff=0.7793;MQ=45.92;MQ0=100;MQRankSum=-6.918;QD=4.54;ReadPosRankSum=-2.989;VQSLOD=0.9022;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:67:99:0,112,1840	0/0:11,0:10:18.06:0,18,300	0/0:67,1:6:6.02:0,6,102	0/0:76,1:10:21.07:0,21,350	0/0:43,0:42:51.10:0,51,856	0/0:35,0:36:75.22:0,75,1211	0/0:53,0:49:69.62:0,70,1208	0/1:38,15:36:99:294,0,209	0/0:80,0:78:99:0,136,2313	0/0:104,0:97:99:0,222,3583	0/0:40,0:39:48.16:0,48,808	0/0:42,0:40:39.13:0,39,657	0/0:69,0:69:99:0,157,2480	0/0:71,0:71:99:0,131,2116	0/0:95,0:94:99:0,163,2621	0/0:72,0:74:99:0,137,2276	0/0:58,0:57:99:0,99,2036	0/0:52,0:51:99:0,119,1861	1/1:12,0:8:5.27:42,5,0	1/1:8,8:13:9.03:110,9,0	1/1:34,16:43:12:126,12,0	0/0:51,0:46:89.48:0,89,1427	0/0:44,0:43:44.72:0,45,757	0/0:72,1:73:99:0,126,2099	0/0:41,0:39:38.91:0,39,803	0/0:74,0:70:99:0,122,2743	1/1:4,8:12:18.06:232,18,0	0/0:46,0:46:99:0,123,1926
chr10	107077809	.	T	TCA	122.34	PASS	AB=0.865;AC=9;AF=0.167;AN=54;BaseQRankSum=2.918;DP=1645;FS=2.985;HRun=0;HaplotypeScore=272.4160;InbreedingCoeff=0.7372;MQ=44.46;MQ0=91;MQRankSum=-0.827;QD=1.29;ReadPosRankSum=-2.830;VQSLOD=2.0796;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:72,0:70:95.47:0,95,1211	1/1:3,0:3:6.02:94,6,0	0/0:81,0:20:38.35:0,38,417	0/0:106,0:23:33.49:0,33,539	0/0:49,0:48:45.61:0,46,573	0/0:47,0:46:65.96:0,66,840	0/0:70,0:65:99:0,114,1408	1/1:20,6:13:3.01:50,3,0	0/0:83,2:83:99:0,126,1572	0/0:96,1:88:99:0,213,2648	0/0:47,0:44:30.10:0,30,382	1/1:7,10:17:3.01:50,3,0	0/0:83,0:81:99:0,146,1840	0/0:88,0:87:99:0,130,1794	0/0:97,1:95:99:0,142,1783	0/0:93,0:92:99:0,155,1933	0/0:66,2:63:99:0,156,1937	0/0:51,1:51:75.67:0,76,1458	./.	0/0:3,1:4:2.04:0,2,6	0/1:29,7:43:0:0,0,0	0/0:54,0:51:52.93:0,53,649	0/0:61,0:58:54.58:0,55,667	0/0:77,0:76:99:0,117,1440	0/0:65,0:58:86.79:0,87,1104	0/0:85,0:81:99:0,198,2429	1/1:1,1:2:3.01:49,3,0	0/0:50,0:50:99:0,128,1548
chr10	107077846	.	T	TC	176.78	PASS	AB=0.837;AC=3;AF=0.054;AN=56;BaseQRankSum=6.947;DP=1512;FS=4.188;HRun=0;HaplotypeScore=239.9389;InbreedingCoeff=0.1477;MQ=43.19;MQ0=101;MQRankSum=-6.661;QD=4.21;ReadPosRankSum=-7.280;VQSLOD=1.4033;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:59:99:0,117,1631	0/0:3,0:3:2.83:0,3,42	0/0:83,1:6:15.04:0,15,191	0/0:135,2:11:30.09:0,30,400	0/0:49,1:46:36.62:0,37,541	0/0:44,0:44:84.22:0,84,1171	0/0:62,0:60:99:0,156,2115	0/1:29,7:19:99:251,0,248	0/0:75,0:74:99:0,144,1985	0/0:101,0:95:99:0,249,3559	0/0:48,0:44:32.46:0,32,458	0/0:10,0:10:1.08:0,1,69	0/0:68,0:67:99:0,156,2121	0/0:73,1:74:99:0,163,2241	0/0:90,0:88:99:0,187,2594	0/0:71,0:71:99:0,135,1859	0/0:60,0:54:99:0,147,1961	0/0:41,0:39:99:0,108,1432	0/0:7,0:1:2.99:0,3,24	1/1:6,0:4:0.47:1,0,0	0/0:27,0:23:3.01:0,3,40	0/0:58,0:56:53.70:0,54,737	0/0:55,1:53:51.14:0,51,686	0/0:64,0:62:99:0,134,1845	0/0:61,1:57:89.65:0,90,1219	0/0:70,0:63:99:0,172,2370	0/0:6,0:5:12.04:0,12,167	0/0:39,0:38:72.54:0,73,1277
chr10	107077853	.	A	AT	93.98	PASS	AB=0.840;AC=5;AF=0.089;AN=56;BaseQRankSum=7.106;DP=1486;FS=9.218;HRun=0;HaplotypeScore=231.1313;InbreedingCoeff=0.4132;MQ=43.29;MQ0=96;MQRankSum=-7.444;QD=1.19;ReadPosRankSum=-5.886;VQSLOD=-0.1041;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:60:99:0,123,1712	0/0:3,0:3:3.01:0,3,41	0/0:81,1:5:12.04:0,12,168	0/0:117,2:7:21.07:0,21,291	0/0:52,0:46:35.45:0,35,577	0/0:43,0:43:81.20:0,81,1114	0/0:56,0:54:99:0,135,1870	0/1:34,8:24:89.85:90,0,433	0/0:70,0:69:99:0,141,1917	0/0:102,5:99:28.40:0,28,3178	0/0:46,0:42:29.46:0,29,418	1/1:6,2:8:0.49:59,0,0	0/0:63,0:62:99:0,140,1941	0/0:73,0:73:99:0,166,2307	0/0:87,3:88:99:0,190,2623	0/0:71,0:71:99:0,134,1877	0/0:56,0:50:99:0,135,1865	0/0:38,0:36:96.30:0,96,1313	0/0:9,0:1:3.01:0,3,31	0/0:6,0:4:2.17:0,2,7	1/1:28,1:24:2.89:48,3,0	0/0:58,0:56:51.95:0,52,700	0/0:58,0:54:60.22:0,60,794	0/0:63,0:61:99:0,134,1829	0/0:65,0:59:90.12:0,90,1222	0/0:74,4:67:88.71:0,89,2207	0/0:6,0:5:12.04:0,12,167	0/0:33,0:32:80.20:0,80,1093
chr10	107077864	.	T	TCAC	2073.24	PASS	AB=0.831;AC=10;AF=0.179;AN=56;BaseQRankSum=10.450;DP=1447;FS=54.824;HRun=0;HaplotypeScore=257.6775;InbreedingCoeff=0.1706;MQ=42.90;MQ0=68;MQRankSum=-7.344;QD=5.86;ReadPosRankSum=-2.847;VQSLOD=0.7370;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:59,2:59:99:0,133,2329	1/1:2,3:5:3.01:74,3,0	0/0:78,0:8:21.06:0,21,327	0/0:91,0:10:27.09:0,27,469	0/0:43,13:53:12.36:0,12,732	0/0:34,8:42:68.78:0,69,1217	0/0:52,2:53:84.36:0,84,2325	0/0:46,0:31:72.16:0,72,1187	0/0:67,1:68:99:0,131,2391	0/1:89,18:100:99:1165,0,3222	0/0:36,12:44:25.01:0,25,411	0/1:3,4:8:7.99:43,0,8	0/0:56,3:59:99:0,135,2349	0/0:62,2:66:99:0,148,2630	0/0:85,2:85:99:0,139,3108	0/0:59,5:68:99:0,120,2181	0/0:47,6:47:99:0,123,2225	0/0:35,2:35:21.10:0,21,1518	0/0:22,0:4:2.98:0,3,28	0/0:3,4:5:2.22:0,2,7	0/0:27,0:23:2.88:0,3,56	0/0:49,9:56:42.42:0,42,704	0/1:46,6:50:8.73:9,0,832	0/0:48,3:51:99:0,117,2074	0/1:50,12:56:99:148,0,1091	0/1:71,6:62:99:211,0,2528	1/1:0,6:5:9.03:220,9,0	0/1:29,4:31:99:345,0,850
chr10	107077891	.	T	TA	1490.91	PASS	AB=0.868;AC=14;AF=0.250;AN=56;BaseQRankSum=12.664;DP=1368;FS=95.793;HRun=1;HaplotypeScore=235.2187;InbreedingCoeff=0.0679;MQ=43.24;MQ0=38;MQRankSum=-9.796;QD=2.87;ReadPosRankSum=-1.635;VQSLOD=-0.2513;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,1:55:99:0,124,1721	0/1:8,1:9:1.89:42,0,2	0/0:65,1:9:23.75:0,24,298	0/0:68,2:11:30.10:0,30,419	0/0:49,6:52:16.88:0,17,479	0/0:31,2:32:54.08:0,54,754	0/0:41,3:44:6.29:0,6,1246	0/1:31,10:30:99:397,0,227	0/0:69,2:70:81.17:0,81,1701	0/1:100,19:108:99:696,0,2266	0/1:42,8:47:63.74:64,0,344	1/1:15,1:14:8.21:99,8,0	0/0:48,2:50:56.56:0,57,1340	0/0:67,2:68:99:0,129,1792	0/0:85,4:86:99:0,144,1968	0/0:53,1:54:99:0,102,1398	0/0:48,0:45:99:0,121,1652	0/1:35,2:37:72.15:72,0,1194	1/1:13,0:4:2.89:37,3,0	0/1:10,3:10:0:0,0,0	0/0:7,1:4:2.98:0,3,21	0/1:59,12:66:8.42:8,0,483	0/0:48,10:53:6.41:0,6,649	0/0:49,0:47:99:0,100,1383	0/1:47,15:57:76.38:76,0,689	0/1:69,6:65:99:134,0,1764	0/1:7,1:7:15.18:15,0,65	0/0:20,2:21:12.14:0,12,490
chr10	107077895	.	ACAT	A	953.09	PASS	AB=0.929;AC=8;AF=0.148;AN=54;BaseQRankSum=12.751;DP=1363;FS=63.205;HRun=0;HaplotypeScore=257.9400;InbreedingCoeff=0.3444;MQ=43.45;MQ0=49;MQRankSum=-11.584;QD=4.22;ReadPosRankSum=-1.333;VQSLOD=0.5434;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:59,1:59:99:0,131,2928	0/0:8,3:11:5.46:0,5,64	0/0:70,0:9:23.79:0,24,404	0/0:68,0:11:30.10:0,30,640	0/0:47,14:56:9.36:0,9,900	0/0:34,0:33:57.08:0,57,1250	0/0:45,0:44:99:0,102,2222	0/0:34,0:22:4.60:0,5,145	0/0:75,0:74:99:0,132,2822	0/1:94,18:102:99:643,0,3556	0/0:41,11:48:35.61:0,36,693	0/1:16,1:15:54.33:77,0,54	0/0:51,1:52:53.05:0,53,2229	0/0:74,2:75:99:0,144,3143	0/0:86,2:85:99:0,139,3142	0/0:50,2:52:98.44:0,98,2153	0/0:48,0:45:99:0,129,2729	0/0:38,0:38:56.53:0,57,2107	1/1:2,0:1:2.50:9,2,0	0/1:14,0:11:0.06:0,0,0	./.	0/0:60,15:69:40.49:0,40,885	0/0:44,11:50:54.40:0,54,1177	0/0:49,0:47:99:0,106,2337	0/0:55,8:57:67.56:0,68,1317	0/1:65,7:64:99:253,0,2883	1/1:8,1:8:9.87:93,10,0	0/0:23,1:24:6.69:0,7,744
chr10	107077899	.	CACACAT	C	359.04	PASS	AB=0.980;AC=7;AF=0.130;AN=54;BaseQRankSum=11.225;DP=1395;FS=62.438;HRun=0;HaplotypeScore=307.1045;InbreedingCoeff=0.1521;MQ=43.16;MQ0=61;MQRankSum=-9.201;QD=1.53;ReadPosRankSum=0.661;VQSLOD=0.5347;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:60,1:61:99:0,127,3457	0/0:12,0:12:1.73:0,2,77	0/0:65,0:8:17.59:0,18,260	0/0:65,0:11:27:0,27,417	0/0:64,2:60:49.42:0,49,1105	0/0:33,1:33:54.64:0,55,1437	0/0:47,0:43:54.97:0,55,1925	0/0:39,0:25:6.39:0,6,139	0/0:76,1:75:99:0,115,3315	0/1:105,6:102:99:201,0,4382	0/0:50,2:46:4.12:0,4,593	0/1:20,0:18:68.10:68,0,161	0/0:55,1:56:93.19:0,93,2664	0/0:75,0:74:99:0,138,3390	0/0:88,1:85:99:0,141,3397	0/0:49,1:50:92.71:0,93,2693	0/0:49,0:46:99:0,120,3359	0/0:39,0:39:87:0,87,2314	1/1:2,0:2:3.01:41,3,0	0/1:15,0:12:0:0,0,0	./.	0/0:74,2:68:22.19:0,22,1034	0/0:56,5:56:47.21:0,47,1238	0/0:50,0:48:99:0,102,3003	0/0:61,4:59:50.87:0,51,1348	0/1:75,4:68:99:99,0,3638	0/1:8,0:7:15.27:67,0,15	0/0:25,2:26:52.46:0,52,922
chr10	107077903	.	CAT	C	99.43	PASS	AB=0.949;AC=10;AF=0.179;AN=56;BaseQRankSum=11.557;DP=1443;FS=41.416;HRun=0;HaplotypeScore=252.8067;InbreedingCoeff=0.3760;MQ=42.72;MQ0=73;MQRankSum=-8.940;QD=0.45;ReadPosRankSum=-0.928;VQSLOD=1.3354;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:63:99:0,133,2227	0/0:15,0:15:5.85:0,6,189	0/0:64,0:7:17.64:0,18,182	0/0:63,1:10:26.98:0,27,346	0/0:67,0:61:53.45:0,53,910	0/0:34,0:33:57.04:0,57,963	0/0:52,0:47:57.70:0,58,1319	0/1:38,0:22:23.22:23,0,84	0/0:80,1:78:99:0,116,2219	0/1:121,0:111:45.03:45,0,2891	0/0:49,1:44:4.39:0,4,427	0/1:18,2:18:51.25:51,0,171	0/0:57,1:57:99:0,113,1794	0/0:76,0:75:99:0,141,2394	0/0:86,1:84:99:0,141,2395	0/0:51,0:51:96.13:0,96,1729	0/0:45,0:42:99:0,123,2204	0/0:40,1:41:99:0,110,1666	1/1:3,0:2:2.90:16,3,0	1/1:17,1:15:5.33:29,5,0	1/1:12,1:11:2.88:16,3,0	0/0:78,0:69:24.01:0,24,762	0/0:65,0:60:42.36:0,42,852	0/0:52,0:50:99:0,105,1918	0/0:59,2:54:50.78:0,51,948	0/0:86,1:73:27.58:0,28,2367	0/1:7,1:7:3.23:57,0,3	0/0:28,0:26:50.64:0,51,721
chr10	107077905	.	TAC	T	713.98	PASS	AB=0.854;AC=12;AF=0.214;AN=56;BaseQRankSum=11.214;DP=1469;FS=29.138;HRun=0;HaplotypeScore=256.8016;InbreedingCoeff=0.4324;MQ=42.49;MQ0=82;MQRankSum=-9.303;QD=2.21;ReadPosRankSum=-0.829;VQSLOD=1.0620;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:64:99:0,112,1849	0/0:14,2:16:17.54:0,18,260	0/0:67,0:6:8.24:0,8,97	0/0:63,0:9:15.05:0,15,218	0/0:48,12:60:50.61:0,51,840	0/0:35,0:34:54.17:0,54,874	0/0:49,0:45:66.15:0,66,987	0/1:26,5:21:76.87:105,0,77	0/0:81,0:78:99:0,113,1857	0/1:108,14:115:99:329,0,2564	0/0:39,9:45:23.34:0,23,380	0/1:18,5:21:20.98:21,0,202	0/0:60,0:59:99:0,100,1539	0/0:78,2:78:99:0,123,1976	0/0:82,2:82:99:0,123,1980	0/0:50,2:52:90.29:0,90,1485	0/0:45,1:43:99:0,123,1990	0/0:41,0:41:83.63:0,84,1486	1/1:3,0:2:3.01:32,3,0	1/1:14,7:19:9:116,9,0	1/1:10,4:13:3.01:37,3,0	0/0:65,12:70:42.13:0,42,692	0/0:54,11:59:47.69:0,48,731	0/0:55,0:53:99:0,108,1730	0/0:51,6:53:48.15:0,48,816	0/1:84,6:75:99:129,0,2170	1/1:5,3:7:7.59:97,8,0	0/0:27,1:26:37.64:0,38,609
chr10	107077907	.	C	CAT	761.48	PASS	AB=0.972;AC=7;AF=0.125;AN=56;BaseQRankSum=10.599;DP=1495;FS=49.006;HRun=0;HaplotypeScore=265.3099;InbreedingCoeff=0.3913;MQ=42.24;MQ0=91;MQRankSum=-8.846;QD=2.77;ReadPosRankSum=1.122;VQSLOD=1.1445;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:63:99:0,134,1858	0/0:17,0:17:20.26:0,20,250	0/0:65,0:5:14.98:0,15,164	0/0:66,0:9:21.02:0,21,256	0/0:67,1:62:51.61:0,52,780	0/0:37,0:36:62.94:0,63,875	0/0:52,0:47:92.81:0,93,1129	0/0:37,0:20:30.07:0,30,192	0/0:78,0:75:99:0,122,1743	0/1:120,7:116:99:639,0,2605	0/0:50,0:44:29.89:0,30,395	0/0:25,0:23:14.18:0,14,244	0/0:57,0:56:91.13:0,91,1429	0/0:80,0:78:99:0,141,1942	0/0:86,0:82:99:0,138,1953	0/0:55,0:55:92.21:0,92,1372	0/0:46,0:43:99:0,126,1857	0/0:40,0:40:99:0,103,1480	0/0:4,0:2:2.37:0,2,8	1/1:24,0:20:8.36:65,8,0	1/1:18,0:17:2.74:15,3,0	0/0:79,3:72:42.61:0,43,638	0/0:64,3:61:54.21:0,54,735	0/0:58,0:55:99:0,117,1635	0/0:58,1:53:51.16:0,51,760	0/1:92,3:79:99:157,0,2131	0/1:11,0:8:6.04:6,0,22	0/0:25,1:23:32.44:0,32,544
chr10	107077915	.	CAT	C	52.31	PASS	AB=0.958;AC=7;AF=0.125;AN=56;BaseQRankSum=10.865;DP=1541;FS=17.300;HRun=0;HaplotypeScore=259.9421;InbreedingCoeff=0.0748;MQ=41.44;MQ0=134;MQRankSum=-8.211;QD=0.21;ReadPosRankSum=-1.340;VQSLOD=1.1570;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:59:99:0,121,2146	0/0:18,0:18:5.88:0,6,316	0/0:69,2:5:8.23:0,8,89	0/0:67,1:6:14.78:0,15,148	0/0:69,0:62:51.02:0,51,927	0/0:34,0:33:57.16:0,57,1002	0/0:50,0:44:69.67:0,70,1090	0/1:45,0:20:6.36:6,0,243	0/0:85,0:82:99:0,133,2189	0/1:131,0:113:29.22:29,0,3051	0/0:46,0:40:29.12:0,29,449	0/1:26,2:26:50.44:50,0,222	0/0:58,0:57:99:0,100,1671	0/0:81,0:78:99:0,117,2162	0/0:82,0:80:99:0,120,2032	0/0:53,0:52:93.23:0,93,1594	0/0:48,0:44:99:0,129,2184	0/0:39,0:39:89.94:0,90,1659	1/1:7,0:3:2.74:12,3,0	0/1:25,1:24:26.24:26,0,32	0/0:32,1:31:2.19:0,2,105	0/0:84,0:74:34.82:0,35,769	0/0:69,0:63:54.39:0,54,843	0/0:62,0:59:99:0,123,2087	0/0:59,0:53:53.70:0,54,974	0/0:95,0:78:42.59:0,43,2707	0/1:11,1:10:11.10:48,0,11	0/0:26,0:23:20.76:0,21,677
chr10	107077933	.	T	TCA	1609.94	PASS	AB=0.799;AC=9;AF=0.173;AN=52;BaseQRankSum=3.757;DP=1651;FS=44.622;HRun=0;HaplotypeScore=277.9341;InbreedingCoeff=0.5649;MQ=39.70;MQ0=183;MQRankSum=-3.452;QD=4.36;ReadPosRankSum=-2.723;VQSLOD=1.3440;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,1:61:93.18:0,93,1190	0/1:5,12:19:73.70:418,0,74	./.	0/0:66,0:2:5.85:0,6,52	0/0:61,3:60:36.08:0,36,462	0/0:28,2:30:35.91:0,36,462	0/0:43,3:40:56.61:0,57,689	0/0:36,0:18:13.29:0,13,286	0/0:84,1:83:95.55:0,96,1351	0/1:118,8:109:99:135,0,2222	0/0:40,6:44:41.97:0,42,540	0/0:27,3:27:17.34:0,17,203	0/0:61,0:61:41.02:0,41,1037	0/0:78,0:75:96.11:0,96,1198	0/0:80,0:78:86.57:0,87,1077	0/0:59,0:60:75.67:0,76,997	0/0:48,3:47:20.87:0,21,1124	0/0:31,1:36:18:0,18,1034	./.	1/1:11,18:29:17.85:304,18,0	1/1:7,60:67:31.35:509,31,0	0/0:82,8:82:48.14:0,48,616	0/0:63,3:65:53.83:0,54,680	0/0:62,0:61:99:0,117,1486	0/0:53,6:58:62.62:0,63,768	0/1:89,8:81:28.82:29,0,1912	1/1:5,11:14:24.06:370,24,0	0/0:41,1:41:26.71:0,27,681
chr10	107078030	.	T	TC	3907.32	PASS	AB=0.816;AC=17;AF=0.304;AN=56;BaseQRankSum=10.588;DP=1226;FS=89.985;HRun=0;HaplotypeScore=403.3669;InbreedingCoeff=-0.4612;MQ=54.56;MQ0=27;MQRankSum=0.022;QD=4.74;ReadPosRankSum=6.792;VQSLOD=1.0337;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:35,28:63:99:259,0,696	0/0:4,0:4:5.99:0,6,81	0/0:84,0:26:50.59:0,51,569	0/0:139,1:52:75.59:0,76,1124	0/1:24,4:27:12.32:12,0,406	0/1:27,4:31:99:147,0,418	0/1:34,20:48:99:495,0,547	0/0:14,0:7:17.86:0,18,162	0/1:59,9:66:99:247,0,720	0/1:55,16:63:99:451,0,1760	0/1:17,6:23:99:139,0,223	0/0:2,0:2:2.74:0,3,12	0/1:39,10:47:99:272,0,744	0/1:56,12:66:98.79:99,0,1011	0/0:75,10:82:71.89:0,72,1213	0/1:60,5:63:14.92:15,0,939	0/1:27,12:34:99:338,0,734	0/1:24,12:33:99:441,0,720	0/0:4,0:3:9.02:0,9,109	0/0:8,0:8:12:0,12,128	0/0:29,0:27:27.09:0,27,369	0/1:26,10:34:99:226,0,542	0/1:28,5:32:89.02:89,0,573	0/1:53,22:74:99:156,0,823	0/1:19,7:26:99:177,0,588	0/1:47,10:49:99:343,0,1368	0/0:7,0:7:18.04:0,18,226	0/0:19,2:21:9.18:0,9,667
chr10	107078221	.	T	TC	226.34	PASS	AB=0.901;AC=8;AF=0.154;AN=52;BaseQRankSum=4.144;DP=739;FS=6.831;HRun=0;HaplotypeScore=289.8019;InbreedingCoeff=-0.0901;MQ=37.68;MQ0=8;MQRankSum=-4.294;QD=1.09;ReadPosRankSum=-0.837;VQSLOD=1.4823;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:19.59:0,20,204	./.	0/0:43,0:13:26.12:0,26,341	0/1:45,0:20:2.19:2,0,401	0/0:29,1:30:11.45:0,11,167	0/0:19,4:22:3.79:0,4,44	0/0:18,2:19:18.51:0,19,235	0/0:6,0:3:6.02:0,6,84	0/1:31,1:31:18.68:19,0,246	0/0:61,0:57:99:0,133,2002	0/0:21,0:21:12.27:0,12,168	0/0:10,1:10:2.22:0,2,7	0/1:29,6:33:99:149,0,227	0/0:28,5:33:15.22:0,15,173	0/0:44,3:46:8.49:0,8,96	0/1:31,5:36:27.77:28,0,138	0/1:16,1:18:4.73:5,0,441	0/0:16,0:15:37.69:0,38,523	0/1:9,0:9:29.25:29,0,201	0/1:11,2:13:0.22:0,0,0	./.	0/0:35,0:34:17.74:0,18,251	0/0:31,0:31:32.72:0,33,445	0/0:32,4:36:8.45:0,8,124	0/0:19,0:20:17.56:0,18,251	0/0:28,0:28:60.39:0,60,1054	0/1:9,8:18:99:110,0,177	0/0:26,0:26:33.06:0,33,537
chr10	107078225	.	CGCAA	C	222.93	PASS	AB=0.972;AC=9;AF=0.173;AN=52;BaseQRankSum=8.300;DP=789;FS=52.387;HRun=0;HaplotypeScore=314.2660;InbreedingCoeff=-0.0610;MQ=37.98;MQ0=9;MQRankSum=-5.709;QD=1.22;ReadPosRankSum=2.112;VQSLOD=1.1291;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:35.63:0,36,503	./.	0/0:48,0:16:40.90:0,41,929	0/0:49,0:22:52.41:0,52,973	0/0:31,0:31:42.17:0,42,604	0/0:23,0:22:27.69:0,28,263	0/0:23,0:22:50.78:0,51,772	0/0:7,0:4:8.94:0,9,119	0/0:33,0:32:0.73:0,1,468	0/0:65,0:61:38.44:0,38,3680	0/0:22,0:22:21.16:0,21,390	0/0:10,0:10:2.94:0,3,22	0/1:39,0:37:97.52:98,0,485	0/1:36,0:36:1.58:2,0,408	0/0:48,0:47:49.33:0,49,436	0/0:37,0:37:30.17:0,30,356	0/1:18,0:18:16.90:17,0,686	0/1:20,0:19:4.45:4,0,1101	0/1:10,0:10:6.71:7,0,180	1/1:11,3:14:0.47:1,0,0	./.	0/0:36,1:38:35.76:0,36,700	0/0:34,0:34:55.44:0,55,1150	0/0:38,0:38:35.62:0,36,412	0/0:22,0:23:14.98:0,15,714	0/0:29,0:28:57.43:0,57,1897	0/1:16,3:19:0.88:1,0,178	0/1:25,1:26:99:200,0,551
chr10	107078249	.	TTAC	T	1004.80	PASS	AB=0.883;AC=15;AF=0.278;AN=54;BaseQRankSum=12.662;DP=1192;FS=36.822;HRun=0;HaplotypeScore=388.5092;InbreedingCoeff=-0.0050;MQ=34.69;MQ0=36;MQRankSum=-6.943;QD=2.03;ReadPosRankSum=1.642;VQSLOD=1.2615;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:41:28.04:0,28,585	0/1:6,0:5:0:0,0,0	0/0:80,0:17:48.15:0,48,889	0/0:87,0:32:70.06:0,70,1437	0/0:41,4:44:38.94:0,39,797	0/0:27,2:28:21.75:0,22,429	0/0:34,0:31:44.24:0,44,966	0/1:17,1:13:98.37:98,0,207	0/1:37,6:49:48.61:49,0,565	0/1:82,5:84:99:269,0,3369	0/0:27,5:32:23.15:0,23,590	1/1:15,0:15:4.56:40,5,0	0/1:46,3:48:52.55:53,0,1327	0/1:35,6:46:42.98:43,0,641	0/0:51,9:61:68.63:0,69,1266	0/1:42,8:56:17.41:17,0,933	0/0:26,0:26:25.69:0,26,1072	0/1:26,0:25:16.51:17,0,1187	0/1:14,0:14:73:73,0,120	0/0:16,0:20:2.35:0,2,16	./.	0/0:45,5:57:32.88:0,33,788	0/0:39,4:49:53.23:0,53,1216	0/0:51,2:53:40.74:0,41,886	0/0:34,1:32:52.56:0,53,1140	0/1:44,4:44:99:108,0,1775	1/1:18,0:23:22.03:214,22,0	0/1:25,3:31:99:181,0,854
chr10	107078254	.	CACACAT	C	906.78	PASS	AB=0.981;AC=12;AF=0.222;AN=54;BaseQRankSum=8.664;DP=1272;FS=5.595;HRun=0;HaplotypeScore=438.3950;InbreedingCoeff=-0.0824;MQ=34.82;MQ0=36;MQRankSum=-7.984;QD=2.98;ReadPosRankSum=1.241;VQSLOD=0.5047;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:44:20.99:0,21,736	0/1:6,0:5:0:0,0,0	0/0:86,0:19:39.11:0,39,770	0/0:90,0:28:64.42:0,64,1007	0/0:54,0:48:35.85:0,36,1195	0/1:31,0:28:65.80:66,0,420	0/1:41,0:35:16.78:17,0,1314	0/1:21,1:16:99:212,0,155	0/1:54,0:50:13.60:14,0,887	0/0:101,0:92:6.08:0,6,4426	0/0:42,0:38:32.58:0,33,1060	0/1:16,1:16:9.22:29,0,9	0/0:57,0:52:26.82:0,27,1777	0/0:47,0:46:33.15:0,33,832	0/0:70,0:65:53.89:0,54,1701	0/0:65,0:60:27.84:0,28,1410	0/1:33,0:33:31.09:31,0,1544	0/1:29,0:27:21.02:21,0,1617	0/1:16,1:14:85.10:238,0,85	0/0:20,1:20:2.54:0,3,21	./.	0/0:69,0:64:40.01:0,40,1220	0/0:57,0:53:50.20:0,50,1597	0/0:56,0:55:39.21:0,39,1220	0/0:38,0:33:25.72:0,26,1568	0/0:54,0:45:84.70:0,85,2301	1/1:18,5:23:0.46:398,0,0	0/1:30,1:31:20.50:20,0,1471
chr10	107078257	.	A	AT	677.10	PASS	AB=0.912;AC=12;AF=0.214;AN=56;BaseQRankSum=7.256;DP=1318;FS=5.467;HRun=0;HaplotypeScore=407.4909;InbreedingCoeff=0.2059;MQ=33.95;MQ0=41;MQRankSum=-5.395;QD=1.99;ReadPosRankSum=-0.675;VQSLOD=1.1416;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:43:22.47:0,22,300	0/0:6,0:5:0:0,0,0	0/0:89,0:19:57.14:0,57,753	0/0:91,0:25:66.22:0,66,916	0/0:54,2:50:35.29:0,35,504	0/0:31,0:28:20.41:0,20,245	0/0:40,1:35:50.33:0,50,703	0/1:23,6:22:99:285,0,166	0/0:54,0:50:37.05:0,37,522	0/1:99,6:95:17.06:17,0,2691	0/0:43,2:41:31.86:0,32,461	0/1:14,5:18:35.42:42,0,35	0/0:57,0:52:90.79:0,91,1210	0/1:50,0:49:0.70:1,0,320	0/0:71,1:67:49.78:0,50,711	0/0:67,0:62:40.37:0,40,652	0/0:33,0:33:60.32:0,60,915	0/0:29,0:27:57.06:0,57,874	0/1:21,1:18:99:159,0,188	1/1:13,8:20:1.62:6,2,0	1/1:15,1:12:1.82:5,2,0	0/0:73,1:69:37.85:0,38,543	0/0:57,2:55:50.11:0,50,711	0/0:57,0:56:36.35:0,36,542	0/0:36,0:33:52.46:0,52,743	0/1:52,3:45:13.65:14,0,1337	1/1:13,10:23:1.72:279,2,0	0/0:31,0:31:35.09:0,35,851
chr10	107078260	.	T	TC	654.26	PASS	AB=0.948;AC=13;AF=0.232;AN=56;BaseQRankSum=8.310;DP=1365;FS=3.764;HRun=0;HaplotypeScore=421.0281;InbreedingCoeff=0.1711;MQ=33.89;MQ0=44;MQRankSum=-8.271;QD=1.94;ReadPosRankSum=-0.777;VQSLOD=1.1272;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,5:42:22.51:0,23,301	0/0:1,5:5:0:0,0,0	0/0:88,0:17:47.96:0,48,596	0/0:94,0:27:68.73:0,69,876	0/0:58,1:54:35.74:0,36,505	0/0:28,3:28:1.14:0,1,191	0/0:45,0:39:58.88:0,59,744	0/1:29,3:25:99:239,0,210	0/1:53,1:51:5.74:6,0,405	0/0:107,3:98:18.64:0,19,2410	0/0:42,2:41:34.87:0,35,503	0/1:18,1:18:2.35:2,0,15	0/0:55,3:54:47.72:0,48,963	0/1:48,2:49:23.47:23,0,367	0/0:67,3:67:48.06:0,48,709	0/0:56,9:63:16.38:0,16,640	0/0:33,1:34:28.80:0,29,828	0/0:27,1:27:11.85:0,12,788	0/1:21,2:19:99:133,0,195	1/1:20,1:20:1.62:6,2,0	1/1:17,0:14:0.23:3,0,0	0/0:74,4:72:38.41:0,38,545	0/0:57,4:58:50.11:0,50,706	0/0:54,3:57:36.97:0,37,543	0/0:40,0:34:52.22:0,52,698	0/1:57,4:49:99:103,0,1210	1/1:22,2:23:14.29:250,14,0	0/1:32,1:33:27.50:28,0,705
chr10	107078277	.	A	AT	519.59	PASS	AB=0.897;AC=12;AF=0.214;AN=56;BaseQRankSum=8.657;DP=1465;FS=9.361;HRun=0;HaplotypeScore=435.6268;InbreedingCoeff=-0.0882;MQ=35.21;MQ0=44;MQRankSum=-5.655;QD=1.10;ReadPosRankSum=-2.221;VQSLOD=0.3246;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,4:44:40.17:0,40,472	0/0:7,0:6:0:0,0,0	0/0:91,0:19:44.51:0,45,571	0/0:103,0:14:39.12:0,39,524	0/0:62,2:57:48.14:0,48,654	0/1:35,3:34:41.01:41,0,266	0/1:47,7:46:15.07:15,0,964	0/1:39,0:31:8.02:8,0,894	0/1:53,3:52:45.21:45,0,479	0/1:112,7:103:90.46:90,0,2566	0/0:46,3:45:40.86:0,41,575	0/0:24,4:26:24.05:0,24,311	0/0:58,4:58:6.27:0,6,1066	0/0:50,1:50:61.68:0,62,787	0/0:73,1:70:90.86:0,91,1069	0/0:63,2:58:59.70:0,60,734	0/0:37,3:40:28.47:0,28,1036	0/1:26,3:27:53.99:54,0,790	0/1:17,6:20:99:150,0,409	0/1:16,6:21:4.80:5,0,35	1/1:21,0:17:2.74:10,3,0	0/0:81,2:77:46.87:0,47,644	0/0:65,3:63:14.03:0,14,726	0/0:61,2:61:57.99:0,58,836	0/1:42,3:38:31.06:31,0,771	0/0:63,2:54:24.02:0,24,1253	0/1:22,5:26:99:213,0,209	0/0:30,1:31:42.42:0,42,790
chr10	107079225	.	T	TTTTA	415.31	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=0.369;DP=522;FS=1.414;HRun=0;HaplotypeScore=91.7351;InbreedingCoeff=0.8268;MQ=71.96;MQ0=0;MQRankSum=-1.182;QD=46.15;ReadPosRankSum=2.207;VQSLOD=4.3440;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:57.17:0,57,890	0/0:11,0:11:27.09:0,27,446	0/0:12,0:10:3.01:0,3,50	./.	0/0:27,0:27:57.18:0,57,896	0/0:14,0:14:39.12:0,39,616	0/0:12,0:12:21.05:0,21,297	0/0:38,0:38:66.21:0,66,1039	0/0:16,0:16:48.14:0,48,740	0/0:25,0:25:54.15:0,54,766	0/0:22,0:22:51.15:0,51,773	1/1:2,5:9:21.07:507,21,0	0/0:17,0:17:27.07:0,27,396	0/0:23,0:23:48.15:0,48,739	0/0:11,0:11:33.10:0,33,519	0/0:14,0:14:30.10:0,30,496	0/0:29,0:29:69.23:0,69,1116	0/0:20,0:20:48.16:0,48,779	0/0:15,0:15:36.11:0,36,569	0/0:30,0:30:63.22:0,63,1035	0/0:11,0:11:18.04:0,18,250	0/0:20,0:20:45.13:0,45,692	0/0:11,0:11:24.07:0,24,373	0/0:12,0:12:24.07:0,24,374	0/0:16,0:16:33.11:0,33,545	0/0:32,0:32:63.20:0,63,994	0/0:30,0:30:78.21:0,78,1234	0/0:9,0:9:18.06:0,18,297
chr10	107079263	.	GAA	G	2754.93	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.825;DP=509;FS=3.916;HRun=10;HaplotypeScore=75.7852;InbreedingCoeff=0.9876;MQ=72.43;MQ0=1;MQRankSum=-0.354;QD=25.99;ReadPosRankSum=-1.262;VQSLOD=3.4766;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.17:0,51,808	0/0:0,0:10:24.95:0,25,86	0/0:13,0:13:15.89:0,16,183	0/0:5,0:6:12.93:0,13,172	0/0:24,0:25:71.73:0,72,1097	0/0:15,0:16:44.63:0,45,654	0/0:12,0:12:33.11:0,33,524	1/1:2,23:25:66.14:724,66,0	0/0:22,0:22:63.21:0,63,1000	0/0:21,0:22:60.16:0,60,910	0/0:29,0:29:81.28:0,81,1282	0/0:2,0:14:29.94:0,30,103	0/0:19,0:20:54.18:0,54,835	0/0:23,0:23:63.21:0,63,983	0/0:14,0:14:36.12:0,36,572	0/0:10,0:11:24.04:0,24,353	0/0:27,0:28:77.75:0,78,1199	0/0:21,0:21:60.14:0,60,894	1/1:2,12:14:36.09:401,36,0	1/1:0,32:32:81.20:903,81,0	1/1:1,7:8:21.05:234,21,0	0/0:18,0:18:51.17:0,51,807	0/0:9,0:9:24.08:0,24,381	0/0:6,0:7:21.07:0,21,314	0/0:16,0:16:42.14:0,42,659	0/0:31,0:32:90.30:0,90,1401	1/1:6,21:27:60.14:668,60,0	0/0:16,0:16:48.16:0,48,762
chr10	107079644	.	A	AGGATGGATGGAT	109.09	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=2.001;DP=885;FS=0.000;HRun=0;HaplotypeScore=302.7431;InbreedingCoeff=0.3959;MQ=67.85;MQ0=0;MQRankSum=-2.448;QD=2.37;ReadPosRankSum=-1.873;VQSLOD=1.5397;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:87.22:0,87,2506	1/1:1,6:9:2.68:175,3,0	0/0:45,0:37:16.17:0,16,178	0/0:43,0:39:45.05:0,45,911	0/0:20,0:20:39.10:0,39,1080	0/0:31,0:31:57.11:0,57,1484	0/0:29,0:29:2.74:0,3,1312	0/0:35,0:35:33.05:0,33,628	0/0:29,0:29:54.11:0,54,1405	0/0:31,0:31:54.17:0,54,1629	0/0:27,0:27:51.08:0,51,1400	0/0:30,0:30:78.26:0,78,2494	0/0:40,0:40:93.27:0,93,2674	0/0:43,0:43:99:0,99,3065	0/0:32,0:32:42.12:0,42,1276	0/0:39,0:39:66.23:0,66,2101	0/1:37,0:37:24.68:25,0,1361	0/0:17,0:17:33.08:0,33,964	0/0:29,0:29:27.08:0,27,664	0/0:22,0:22:48.12:0,48,1422	0/0:82,0:83:99:0,162,4943	0/0:27,0:27:54.16:0,54,1672	0/0:15,0:15:27.08:0,27,745	0/0:34,0:34:90.14:0,90,2449	0/0:23,0:23:40.26:0,40,1074	0/0:30,0:30:33.11:0,33,961	0/0:28,0:28:72.23:0,72,2239	0/0:14,0:14:21.07:0,21,670
chr10	107081914	.	TGC	T	252.51	PASS	AB=0.995;AC=17;AF=0.340;AN=50;BaseQRankSum=3.214;DP=392;FS=6.473;HRun=0;HaplotypeScore=64.1773;InbreedingCoeff=0.2022;MQ=52.47;MQ0=7;MQRankSum=0.084;QD=1.69;ReadPosRankSum=0.369;VQSLOD=0.8173;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:34.38:0,34,433	0/1:9,0:9:12.90:13,0,16	./.	./.	0/0:9,0:9:2.74:0,3,12	0/0:14,0:14:14.91:0,15,160	0/0:19,0:19:11.93:0,12,247	./.	0/0:4,0:4:3:0,3,25	0/0:16,0:15:29.54:0,30,305	0/0:15,0:14:25.25:0,25,285	1/1:1,0:1:3:25,3,0	1/1:3,1:4:3.01:35,3,0	0/0:8,0:8:2.96:0,3,19	1/1:2,1:3:3.01:35,3,0	0/1:4,0:4:12.82:19,0,13	0/1:52,2:54:99:101,0,635	0/0:37,0:37:2.45:0,2,441	1/1:14,0:14:9.40:65,9,0	1/1:20,0:17:10.34:56,10,0	0/0:12,0:12:0:0,0,0	0/0:6,0:6:6.01:0,6,72	0/1:12,0:12:7.10:7,0,146	0/0:25,2:27:9.47:0,9,433	0/1:12,0:11:3.96:14,0,4	0/0:14,0:14:19.20:0,19,212	0/1:10,0:10:4.72:15,0,5	0/1:6,0:5:15.68:16,0,28
chr10	107084470	.	CGT	C	3512.16	PASS	AB=0.822;AC=17;AF=0.304;AN=56;BaseQRankSum=-1.535;DP=1112;FS=4.891;HRun=0;HaplotypeScore=278.4030;InbreedingCoeff=0.5092;MQ=42.83;MQ0=2;MQRankSum=-4.067;QD=8.59;ReadPosRankSum=0.539;VQSLOD=2.7691;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,1:46:55.90:0,56,849	1/1:7,7:14:11.19:147,11,0	0/0:42,0:29:54.42:0,54,899	0/0:35,0:23:48.07:0,48,699	0/0:36,17:53:18.05:0,18,271	0/0:25,5:30:38.63:0,39,639	0/0:30,5:35:22.94:0,23,348	1/1:11,12:23:22.85:428,23,0	0/0:23,16:39:3.70:0,4,526	0/1:67,22:89:99:647,0,1725	0/0:28,10:38:33.31:0,33,542	1/1:6,27:33:12.28:327,12,0	0/0:30,12:42:24.26:0,24,389	0/0:29,11:40:30.03:0,30,492	0/0:31,10:41:29.95:0,30,494	0/0:22,17:39:33.72:0,34,493	0/0:15,3:18:24.04:0,24,364	0/1:15,2:17:50.33:50,0,229	1/1:20,13:31:15.92:453,16,0	1/1:26,21:48:21.37:294,21,0	1/1:17,22:39:26.43:334,26,0	0/0:39,26:65:2.60:0,3,556	0/0:31,15:46:35.97:0,36,579	0/0:26,2:28:32.58:0,33,541	0/0:43,23:66:11.22:0,11,674	0/1:42,22:64:99:683,0,832	0/1:18,7:25:99:111,0,149	0/1:21,3:24:38.33:38,0,505
chr10	107084498	.	TA	T	5070.48	PASS	AB=1.000;AC=52;AF=0.963;AN=54;BaseQRankSum=-3.629;DP=532;FS=8.644;HRun=1;HaplotypeScore=151.8567;InbreedingCoeff=-0.0588;MQ=35.90;MQ0=1;MQRankSum=1.280;QD=9.60;ReadPosRankSum=5.518;VQSLOD=2.3307;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:34.77:268,35,0	1/1:9,0:9:17.96:145,18,0	0/1:17,0:11:9.39:125,0,9	0/1:13,0:9:49.77:50,0,58	1/1:25,0:26:5.45:35,5,0	1/1:13,0:14:26.57:201,27,0	1/1:19,0:19:11.46:84,11,0	1/1:12,0:13:6.26:147,6,0	1/1:20,0:20:36.73:287,37,0	1/1:40,0:40:99:726,101,0	1/1:20,0:20:21.62:137,22,0	1/1:16,0:16:11.97:96,12,0	1/1:16,0:16:14.85:114,15,0	1/1:22,0:23:24.04:190,24,0	1/1:18,0:18:11.89:88,12,0	1/1:15,0:15:23.55:168,24,0	1/1:12,0:12:26.84:201,27,0	1/1:7,0:7:10.85:80,11,0	1/1:16,1:16:16.56:218,17,0	1/1:23,0:23:14.64:122,15,0	1/1:21,0:20:3.88:28,4,0	1/1:24,0:24:29.79:223,30,0	1/1:28,1:29:12.73:94,13,0	1/1:22,0:22:23.41:168,23,0	1/1:30,0:30:38.83:302,39,0	1/1:21,0:21:33.63:402,34,0	./.	1/1:12,4:16:47.65:373,48,0
chr10	107084624	.	ACATGTGCACAAGTGCTTG	A	64.86	PASS	AC=4;AF=0.080;AN=50;BaseQRankSum=-0.699;DP=481;FS=7.825;HRun=0;HaplotypeScore=228.0231;InbreedingCoeff=0.8013;MQ=55.49;MQ0=0;MQRankSum=-0.572;QD=3.60;ReadPosRankSum=-2.577;VQSLOD=1.3056;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.14:0,57,3797	./.	0/0:17,0:15:51.18:0,51,3299	0/0:13,0:11:39.13:0,39,2498	0/0:24,0:24:63.22:0,63,4755	0/0:11,0:11:33.11:0,33,2521	0/0:13,0:13:36.12:0,36,2798	1/1:7,5:12:14.98:152,15,0	0/0:17,0:17:45.63:0,46,3530	0/0:51,0:51:99:0,151,11372	0/0:22,0:22:66.22:0,66,4526	0/0:22,0:22:54.13:0,54,4161	0/0:16,0:16:41.73:0,42,3396	0/0:17,0:17:42.14:0,42,3176	0/0:30,0:30:84.23:0,84,6372	0/0:21,0:21:60.21:0,60,4780	0/0:13,0:13:39.13:0,39,2956	0/0:7,0:7:21.07:0,21,1274	0/0:3,0:3:2.84:0,3,14	./.	1/1:6,0:6:2.36:7,2,0	0/0:31,0:31:90.31:0,90,7344	0/0:19,0:19:45.15:0,45,3502	0/0:12,0:12:33.58:0,34,2067	0/0:29,0:29:87.30:0,87,6072	0/0:30,0:30:90.31:0,90,7322	./.	0/0:19,0:19:54.19:0,54,4472
chr10	107084864	.	CT	C	2338.44	PASS	AB=0.965;AC=16;AF=0.286;AN=56;BaseQRankSum=9.502;DP=668;FS=2.180;HRun=11;HaplotypeScore=85.2956;InbreedingCoeff=0.8266;MQ=75.46;MQ0=0;MQRankSum=2.047;QD=10.73;ReadPosRankSum=2.529;VQSLOD=3.4311;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,1:54:99:0,102,1251	1/1:1,9:10:20.94:166,21,0	0/1:28,1:27:1.56:2,0,263	0/1:25,1:22:13.98:14,0,95	0/0:21,1:22:39.09:0,39,408	0/0:17,1:19:29.31:0,29,491	0/0:25,4:30:44.31:0,44,630	1/1:12,15:27:44.80:355,45,0	0/0:19,0:19:42.08:0,42,428	0/0:30,0:31:65.17:0,65,671	0/0:14,1:15:2.44:0,2,222	1/1:6,15:21:38.95:320,39,0	0/0:22,1:24:32.17:0,32,490	0/0:16,1:17:20.38:0,20,388	0/0:22,2:25:32.37:0,32,535	0/0:21,1:22:29.46:0,29,503	0/0:42,0:43:99:0,108,1066	0/0:10,0:10:23.85:0,24,236	1/1:8,15:24:17.96:343,18,0	1/1:4,16:21:37.98:301,38,0	1/1:6,34:40:86.87:714,87,0	0/0:19,0:19:41.96:0,42,409	0/0:12,0:12:24.06:0,24,255	0/0:26,0:26:72:0,72,740	0/0:17,0:17:17.53:0,18,337	0/0:29,1:31:37.18:0,37,566	1/1:5,15:20:38.94:320,39,0	0/0:14,0:14:42.07:0,42,429
chr10	107085090	.	AGT	A	826.60	PASS	AB=0.860;AC=20;AF=0.370;AN=54;BaseQRankSum=8.655;DP=687;FS=11.986;HRun=0;HaplotypeScore=101.6055;InbreedingCoeff=0.0580;MQ=52.89;MQ0=26;MQRankSum=-2.621;QD=2.29;ReadPosRankSum=2.702;VQSLOD=1.3436;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,13:30:46.32:273,0,46	1/1:4,0:8:5.68:28,6,0	0/0:19,0:5:2.98:0,3,22	./.	0/0:28,0:27:42.11:0,42,594	0/0:19,0:19:25.41:0,25,428	0/1:33,8:41:60.99:61,0,859	0/0:27,0:33:7.69:0,8,94	0/1:17,0:16:27.45:27,0,167	0/1:30,3:31:57.16:57,0,443	0/0:19,1:20:0.65:0,1,366	1/1:9,0:24:42.61:209,43,0	0/1:19,3:22:61.16:61,0,423	0/0:26,1:28:2.97:0,3,604	0/1:20,1:21:13.48:13,0,494	0/0:17,0:17:24.08:0,24,357	0/0:34,4:37:1.09:0,1,839	0/0:24,1:30:8.04:0,8,486	1/1:14,0:14:5.68:28,6,0	1/1:14,0:23:8.43:40,8,0	0/1:26,0:37:0.01:0,0,0	0/0:24,0:24:11.24:0,11,586	0/0:27,0:27:37.92:0,38,520	0/1:29,3:32:13.97:14,0,675	0/0:21,0:21:33.11:0,33,502	0/1:19,4:23:99:101,0,279	1/1:10,0:12:2.84:14,3,0	0/1:10,2:13:60.26:60,0,155
chr10	107092013	.	AAAAG	A	591.74	PASS	AB=1.000;AC=12;AF=0.231;AN=52;BaseQRankSum=6.588;DP=535;FS=3.029;HRun=0;HaplotypeScore=94.3843;InbreedingCoeff=0.6511;MQ=48.41;MQ0=37;MQRankSum=-1.690;QD=4.42;ReadPosRankSum=2.966;VQSLOD=1.8582;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:23:44.97:0,45,941	1/1:6,0:8:3:28,3,0	./.	./.	0/0:22,0:20:36.09:0,36,707	0/0:11,0:11:30.10:0,30,675	0/0:21,0:18:24.07:0,24,513	0/0:27,0:25:2.60:0,3,10	0/0:18,0:13:12.04:0,12,277	0/0:25,0:23:45.15:0,45,1036	0/0:13,0:13:21.06:0,21,406	0/1:18,0:15:3.60:20,0,4	0/0:12,0:12:27.04:0,27,447	0/0:7,0:10:3.01:0,3,52	1/1:10,13:21:12.04:183,12,0	0/0:13,0:13:30.07:0,30,565	0/0:35,0:27:45.12:0,45,949	0/0:21,0:16:27.05:0,27,506	0/0:20,0:17:11.91:0,12,107	0/1:27,0:26:22.87:23,0,141	1/1:8,0:6:1.82:5,2,0	0/0:21,0:22:27.09:0,27,587	0/0:23,0:21:30.10:0,30,676	1/1:13,12:23:21.07:320,21,0	0/0:20,0:18:51.16:0,51,994	0/0:26,0:23:33.11:0,33,748	1/1:25,0:24:17.42:167,17,0	0/0:13,0:12:27.09:0,27,551
chr10	107092015	.	AAGAAAGAAAG	A	2625.35	PASS	AB=1.000;AC=12;AF=0.222;AN=54;BaseQRankSum=9.484;DP=531;FS=10.433;HRun=0;HaplotypeScore=136.0861;InbreedingCoeff=0.7113;MQ=48.69;MQ0=33;MQRankSum=-6.765;QD=20.35;ReadPosRankSum=-4.357;VQSLOD=0.7818;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:23:47.07:0,47,2246	0/1:8,0:8:53.48:53,0,111	./.	0/0:11,0:1:3.01:0,3,32	0/0:21,0:20:54.17:0,54,1749	0/0:11,0:11:33.11:0,33,1418	0/0:24,0:20:56.84:0,57,1706	1/1:10,0:25:67.75:784,68,0	0/0:18,0:13:30.05:0,30,787	0/0:25,0:23:66.08:0,66,2493	0/0:13,0:13:30.08:0,30,948	0/1:19,0:16:88.44:105,0,88	0/0:12,0:12:33.09:0,33,1147	0/0:13,0:10:8.99:0,9,234	0/0:23,0:21:20.78:0,21,340	0/0:13,0:13:35.81:0,36,1488	0/0:36,0:28:75.17:0,75,2432	0/0:22,0:17:48.15:0,48,1395	1/1:13,0:16:15.78:393,16,0	1/1:2,23:24:50.69:807,51,0	1/1:2,5:6:5.38:67,5,0	0/0:22,0:22:45.15:0,45,1600	0/0:23,0:21:39.12:0,39,1460	0/0:24,0:22:47.73:0,48,754	0/0:20,0:18:54.18:0,54,1899	0/0:26,0:23:59.87:0,60,2015	1/1:3,22:24:17.55:589,18,0	0/0:12,0:11:33.11:0,33,1457
chr10	107092016	.	AG	A	762.68	PASS	AB=0.990;AC=12;AF=0.222;AN=54;BaseQRankSum=10.870;DP=527;FS=1.684;HRun=1;HaplotypeScore=70.7811;InbreedingCoeff=0.4725;MQ=48.97;MQ0=33;MQRankSum=-8.148;QD=4.65;ReadPosRankSum=-1.551;VQSLOD=-0.0481;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:23:45.18:0,45,671	0/0:8,0:8:7.86:0,8,139	./.	0/0:11,0:1:3.01:0,3,35	0/0:21,0:20:54.06:0,54,634	0/0:11,0:11:33.09:0,33,419	0/0:24,0:20:59.18:0,59,685	1/1:24,3:25:54.56:399,55,0	0/0:18,0:13:29.66:0,30,348	0/0:25,0:23:63.11:0,63,776	0/0:12,0:12:30.06:0,30,360	1/1:14,5:16:31.67:244,32,0	0/0:11,0:11:33.08:0,33,398	0/0:14,0:11:11.96:0,12,103	0/1:23,0:21:13.18:13,0,71	0/0:13,0:13:35.17:0,35,468	0/0:37,0:29:76.64:0,77,872	0/0:23,0:18:48.07:0,48,549	0/1:15,0:13:42.86:73,0,43	0/1:24,1:24:73.24:73,0,99	1/1:7,0:6:2.67:17,3,0	0/0:21,0:21:45.10:0,45,541	0/0:23,0:21:39.05:0,39,487	0/1:24,0:22:16.63:17,0,210	0/0:20,0:18:54.05:0,54,601	0/0:26,0:23:37.67:0,38,689	1/1:24,0:23:17.21:89,17,0	0/0:12,0:11:7.33:0,7,363
chr10	107095790	.	ACC	A	5055.22	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.554;DP=486;FS=0.000;HRun=4;HaplotypeScore=64.2899;InbreedingCoeff=0.9976;MQ=92.60;MQ0=0;MQRankSum=-0.998;QD=36.37;ReadPosRankSum=-0.625;VQSLOD=4.0468;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.27:0,84,1535	0/0:8,0:8:21.07:0,21,393	0/0:21,0:21:63.21:0,63,1120	0/0:20,0:20:51.16:0,51,922	0/0:16,0:16:48.03:0,48,857	0/0:11,0:11:30.06:0,30,526	0/0:22,0:22:66.19:0,66,1128	1/1:1,21:22:63.20:907,63,0	0/0:22,0:22:66.23:0,66,1230	0/0:15,0:15:45.14:0,45,794	0/0:9,0:9:24.08:0,24,448	1/1:1,21:22:54.18:787,54,0	0/0:10,0:10:30.10:0,30,562	0/0:23,0:23:69.23:0,69,1262	0/0:18,0:18:54.18:0,54,982	0/0:15,0:15:39.13:0,39,731	0/0:20,0:20:59.85:0,60,1007	0/0:10,0:10:27.09:0,27,506	1/1:1,19:20:57.17:803,57,0	1/1:0,19:19:48.16:705,48,0	1/1:4,40:44:99:1457,99,0	0/0:13,0:13:39.12:0,39,700	0/0:9,0:9:24.07:0,24,418	0/0:12,0:12:33.11:0,33,618	0/0:12,0:12:36.10:0,36,613	0/0:18,0:18:54.14:0,54,976	1/1:1,11:12:27.05:396,27,0	0/0:14,0:14:42.14:0,42,787
chr10	107095962	.	G	GAA	2285.92	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-5.042;DP=456;FS=1.070;HRun=8;HaplotypeScore=57.2412;InbreedingCoeff=0.9839;MQ=69.56;MQ0=1;MQRankSum=-0.914;QD=23.33;ReadPosRankSum=-0.340;VQSLOD=2.3262;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.25:0,96,1070	0/0:6,0:6:18.05:0,18,201	0/0:18,0:13:18.51:0,19,197	0/0:18,0:15:26.74:0,27,248	0/0:15,0:15:36.07:0,36,391	0/0:12,0:12:36.10:0,36,401	0/0:12,0:12:30.07:0,30,333	1/1:4,7:13:27.06:383,27,0	0/0:6,0:6:12:0,12,125	0/0:16,0:16:39.10:0,39,435	0/0:17,0:17:45.12:0,45,501	1/1:6,0:20:30.46:137,30,0	0/0:12,0:12:33.09:0,33,368	0/0:12,0:12:27.06:0,27,301	0/0:9,0:9:15.03:0,15,167	0/0:10,0:10:24.06:0,24,267	0/0:40,0:39:99:0,117,1304	0/0:26,0:26:66.10:0,66,712	1/1:6,8:14:24.08:381,24,0	1/1:4,7:13:23.57:334,24,0	1/1:4,12:16:33.11:524,33,0	0/0:8,0:8:24.06:0,24,268	0/0:10,0:10:21.05:0,21,234	0/0:23,0:23:69.10:0,69,729	0/0:22,0:22:54.13:0,54,600	0/0:19,0:19:51.12:0,51,559	1/1:5,17:22:45.15:714,45,0	0/0:11,0:11:33.09:0,33,368
chr10	107097576	.	GAGGGAGGTC	G	1815.14	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=7.551;DP=597;FS=10.696;HRun=0;HaplotypeScore=170.3751;InbreedingCoeff=0.9897;MQ=84.55;MQ0=0;MQRankSum=-7.884;QD=67.23;ReadPosRankSum=1.722;VQSLOD=3.2856;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,5441	1/1:1,4:5:15.05:439,15,0	0/0:26,0:26:66.19:0,66,2521	0/0:19,0:18:45.12:0,45,1776	0/0:13,0:13:27.09:0,27,1226	0/0:15,0:15:42.14:0,42,1859	0/0:39,0:39:90.31:0,90,4133	0/0:34,0:34:75.26:0,75,3270	0/0:23,0:23:66.23:0,66,3112	0/0:24,0:24:63.22:0,63,2849	0/0:9,0:9:27.09:0,27,1254	1/1:4,18:22:51.18:1494,51,0	0/0:23,0:23:66.23:0,66,2854	0/0:17,0:17:45.15:0,45,2072	0/0:31,0:31:93.32:0,93,4312	0/0:16,0:16:48.16:0,48,2173	0/0:26,0:26:72.25:0,72,3072	0/0:23,0:23:51.17:0,51,2340	0/0:17,0:17:33.11:0,33,1538	0/0:12,0:12:30.10:0,30,1414	0/0:50,0:50:99:0,138,6210	0/0:19,0:19:54.19:0,54,2487	0/0:11,0:11:27.09:0,27,1135	0/0:13,0:13:39.13:0,39,1606	0/0:21,0:21:54.19:0,54,2399	0/0:25,0:25:63.22:0,63,2871	0/0:21,0:21:51.18:0,51,2380	./.
chr10	107099620	.	A	ACG	926.92	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-4.763;DP=657;FS=0.511;HRun=0;HaplotypeScore=88.5146;InbreedingCoeff=0.1819;MQ=60.93;MQ0=6;MQRankSum=1.283;QD=6.02;ReadPosRankSum=-5.333;VQSLOD=1.3304;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:55:99:0,156,2033	1/1:0,10:10:21.07:401,21,0	0/0:20,0:13:24.11:0,24,401	0/0:23,0:15:35.93:0,36,409	0/0:16,0:16:45.04:0,45,535	0/0:24,0:24:72.06:0,72,825	0/0:28,0:28:81.17:0,81,1103	0/1:38,0:38:99:271,0,143	0/0:21,0:21:63.10:0,63,829	0/0:27,0:27:81.19:0,81,1075	0/0:14,0:14:39.05:0,39,504	0/0:13,0:13:11.32:0,11,114	0/0:20,0:20:27.85:0,28,686	0/0:24,0:24:69.16:0,69,943	0/0:20,0:20:57.12:0,57,762	0/0:16,0:16:48.05:0,48,619	0/0:28,0:28:81.15:0,81,1099	0/0:26,0:26:78.18:0,78,1097	0/1:27,0:25:68.73:201,0,69	0/1:16,0:16:52.02:52,0,129	0/1:47,0:46:10.66:11,0,415	0/0:18,0:18:51.04:0,51,683	0/0:17,0:17:51.14:0,51,734	0/0:25,0:25:72.18:0,72,1020	0/0:23,0:23:66.15:0,66,880	0/0:33,0:33:96.28:0,96,1370	0/1:16,0:16:83.54:126,0,84	0/0:11,0:11:33.01:0,33,412
chr10	107101303	.	GAGAGCTGTAACACTGAGA	G	567.26	PASS	AB=1.000;AC=8;AF=0.160;AN=50;BaseQRankSum=-3.263;DP=862;FS=3.219;HRun=0;HaplotypeScore=124.3174;InbreedingCoeff=0.6229;MQ=27.27;MQ0=149;MQRankSum=-1.466;QD=3.94;ReadPosRankSum=-3.029;VQSLOD=1.3133;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:21:36.12:0,36,2300	0/1:14,0:5:11.51:125,0,12	./.	./.	0/0:30,0:21:24.08:0,24,1386	0/0:29,0:13:12.04:0,12,995	0/0:36,0:16:41.95:0,42,1762	1/1:26,0:8:20.79:142,21,0	0/0:30,0:11:24:0,24,1602	0/0:49,0:19:51.11:0,51,2715	0/0:25,0:17:26.93:0,27,1663	0/0:33,0:21:25.80:0,26,1837	0/0:28,0:14:19:0,19,1402	0/0:34,0:15:18.06:0,18,1513	0/0:33,0:12:9.03:0,9,768	0/0:36,0:9:11.97:0,12,347	0/0:45,0:22:33.07:0,33,2085	0/0:40,0:18:15.05:0,15,1091	1/1:30,0:10:20.66:175,21,0	1/1:12,15:15:6.02:200,6,0	0/1:47,0:16:15.30:67,0,15	0/0:29,0:20:18.06:0,18,1275	0/0:21,0:15:12.16:0,12,593	0/0:27,0:11:24.08:0,24,1983	0/0:30,0:25:39.34:0,39,2704	0/0:59,0:17:48.13:0,48,2463	0/0:26,10:8:0:0,0,0	./.
chr10	107102033	.	ACC	A	3787.18	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.112;DP=595;FS=4.908;HRun=8;HaplotypeScore=71.2937;InbreedingCoeff=0.9987;MQ=74.95;MQ0=1;MQRankSum=-0.562;QD=28.91;ReadPosRankSum=0.534;VQSLOD=3.6309;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:50:99:0,144,2404	1/1:1,9:10:30.09:365,30,0	0/0:12,0:12:26.83:0,27,416	0/0:12,0:11:23.37:0,23,292	0/0:22,0:22:54.17:0,54,886	0/0:19,0:19:45.14:0,45,736	0/0:27,0:27:72.22:0,72,1149	1/1:3,21:24:63.19:768,63,0	0/0:16,0:16:45.15:0,45,760	0/0:19,0:19:57.19:0,57,934	0/0:15,0:16:38.61:0,39,592	0/0:16,0:16:48.16:0,48,802	0/0:28,0:28:75.73:0,76,1258	0/0:16,0:17:44.64:0,45,717	0/0:24,0:24:63.20:0,63,1038	0/0:22,0:22:54.18:0,54,907	0/0:26,0:26:72.25:0,72,1197	0/0:24,0:24:66.23:0,66,1108	1/1:7,21:28:57.16:695,57,0	1/1:1,14:15:33.05:386,33,0	1/1:4,27:31:75.23:915,75,0	0/0:22,0:22:60.21:0,60,1005	0/0:17,0:17:45.15:0,45,761	0/0:31,0:31:87.24:0,87,1412	0/0:15,0:15:45.15:0,45,756	0/0:19,0:19:48.13:0,48,736	1/1:1,22:23:54.17:659,54,0	0/0:8,0:8:24.08:0,24,406
chr10	107104095	.	CCAAA	C	4373.69	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.180;DP=428;FS=0.513;HRun=0;HaplotypeScore=73.0941;InbreedingCoeff=0.9411;MQ=95.89;MQ0=1;MQRankSum=-5.008;QD=46.53;ReadPosRankSum=2.695;VQSLOD=5.3715;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.30:0,87,2372	1/1:0,3:3:9.03:174,9,0	0/0:21,0:21:60.09:0,60,1437	0/0:25,0:25:72.13:0,72,1701	0/0:8,0:8:24.08:0,24,647	0/0:13,0:13:36.11:0,36,901	0/0:25,0:25:69.16:0,69,1658	1/1:0,12:12:33.10:597,33,0	0/0:9,0:9:27.08:0,27,668	0/0:12,0:12:36.12:0,36,870	0/0:9,0:9:27.09:0,27,739	1/1:0,10:10:24.08:465,24,0	0/0:9,0:9:27.09:0,27,739	0/0:16,0:16:48.15:0,48,1164	0/0:14,0:14:42.14:0,42,1137	0/0:2,0:2:6.02:0,6,164	0/0:33,0:33:96.33:0,96,2552	0/0:35,0:34:99:0,99,2450	1/1:1,14:15:42.14:813,42,0	1/1:0,4:4:9.03:174,9,0	1/1:0,38:38:74.52:1453,75,0	0/0:6,0:6:18.06:0,18,463	0/0:11,0:11:33.10:0,33,848	0/0:38,0:38:99:0,114,3032	0/0:4,0:4:12.04:0,12,327	0/0:12,0:12:36.11:0,36,912	1/1:0,12:12:36.12:696,36,0	0/0:3,0:3:9.03:0,9,246
chr10	107104778	.	GC	G	2329.39	PASS	AB=0.921;AC=17;AF=0.304;AN=56;BaseQRankSum=8.740;DP=499;FS=10.762;HRun=10;HaplotypeScore=53.7004;InbreedingCoeff=0.7241;MQ=79.33;MQ0=0;MQRankSum=-1.765;QD=14.12;ReadPosRankSum=0.987;VQSLOD=2.5483;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,2:49:62.10:0,62,1100	1/1:0,2:2:6:52,6,0	0/1:21,0:19:22.88:23,0,245	0/0:17,0:18:23.72:0,24,192	0/1:6,1:7:8.01:8,0,148	0/0:19,0:19:54.10:0,54,570	0/0:18,1:19:22.09:0,22,472	1/1:3,12:15:35.97:309,36,0	0/0:16,0:16:30.04:0,30,318	0/1:14,2:16:15.87:16,0,290	0/0:4,0:4:9.01:0,9,91	1/1:5,27:32:71.98:625,72,0	0/0:7,0:7:15.51:0,16,167	0/0:23,0:23:63.13:0,63,669	0/0:25,0:25:60.13:0,60,645	0/0:25,0:25:66.16:0,66,713	0/0:24,0:28:69.01:0,69,736	0/0:23,0:23:60.13:0,60,644	1/1:0,13:13:35.98:310,36,0	1/1:3,14:17:41.95:358,42,0	1/1:5,16:21:50.93:436,51,0	0/0:16,0:16:36.08:0,36,389	0/0:9,0:9:27.07:0,27,298	0/0:14,0:16:41.95:0,42,446	0/0:4,0:4:12.02:0,12,124	0/0:13,0:13:24.05:0,24,255	1/1:2,19:21:44.99:391,45,0	0/0:19,0:20:46.87:0,47,478
chr10	107107313	.	TGGGG	T	1629.24	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=4.736;DP=417;FS=31.047;HRun=14;HaplotypeScore=74.3950;InbreedingCoeff=0.7107;MQ=73.86;MQ0=1;MQRankSum=0.765;QD=13.93;ReadPosRankSum=8.955;VQSLOD=-0.7186;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:19.76:0,20,285	1/1:3,0:5:1.22:3,1,0	0/0:13,0:11:18.95:0,19,166	0/0:19,0:15:19.31:0,19,205	0/0:10,0:11:3.01:0,3,37	0/0:15,0:15:8.98:0,9,94	0/0:32,0:32:37.97:0,38,659	1/1:12,0:12:5.60:32,6,0	0/0:14,0:14:9.03:0,9,171	0/0:15,0:15:3.01:0,3,47	0/0:12,0:12:21.07:0,21,381	1/1:7,1:12:3.89:44,4,0	0/0:8,0:8:3.43:0,3,21	0/0:16,0:17:12.93:0,13,210	0/0:11,0:11:11.88:0,12,225	0/0:13,0:13:18.06:0,18,315	0/0:26,0:26:33.47:0,33,442	0/0:9,0:9:15.05:0,15,254	1/1:6,5:11:11.88:150,12,0	1/1:5,7:12:17.97:232,18,0	1/1:17,19:37:50.95:715,51,0	0/0:9,0:9:3.62:0,4,12	1/1:6,0:6:0.43:1,0,0	0/0:17,0:17:24.07:0,24,422	0/0:9,0:9:5.89:0,6,72	0/0:17,0:17:10.28:0,10,151	1/1:10,12:22:45.06:620,45,0	0/0:8,0:8:12.04:0,12,221
chr10	107107324	.	GGGGA	G	710.61	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=8.575;DP=347;FS=42.468;HRun=0;HaplotypeScore=66.4216;InbreedingCoeff=0.2545;MQ=70.17;MQ0=1;MQRankSum=0.809;QD=9.23;ReadPosRankSum=9.685;VQSLOD=0.1046;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:51.04:0,51,722	0/0:4,0:4:7.54:0,8,52	0/0:13,0:11:22.64:0,23,211	0/0:18,0:11:21.79:0,22,267	0/0:2,0:2:3.01:0,3,39	0/0:7,0:7:15.49:0,15,197	0/0:28,0:28:44.47:0,44,801	0/0:16,0:16:42.97:0,43,346	0/0:16,0:16:39.02:0,39,574	0/0:8,0:8:18:0,18,196	0/0:13,0:13:33.11:0,33,600	0/1:11,0:11:2.75:3,0,118	0/0:7,0:7:15.81:0,16,173	0/0:13,0:13:24.53:0,25,373	0/0:7,0:7:17.90:0,18,346	0/0:12,0:12:29.64:0,30,390	0/0:21,0:21:40.70:0,41,585	0/0:7,0:7:17.95:0,18,303	0/1:13,0:13:28.67:29,0,213	0/1:8,0:8:7.98:89,0,8	0/1:28,0:28:34.43:296,0,34	0/0:11,0:11:21.52:0,22,283	0/0:4,0:4:5.63:0,6,85	0/0:13,0:13:30.03:0,30,471	0/0:9,0:9:18.45:0,18,249	0/0:11,0:11:26.74:0,27,343	1/1:12,5:17:44.65:419,45,0	0/0:7,0:7:21.07:0,21,395
chr10	107107996	.	T	TAAA	5557.90	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-3.606;DP=595;FS=2.321;HRun=8;HaplotypeScore=83.9799;InbreedingCoeff=0.9935;MQ=68.50;MQ0=0;MQRankSum=-3.824;QD=36.09;ReadPosRankSum=-2.127;VQSLOD=3.9716;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.26:0,87,1128	1/1:2,0:12:23.66:344,24,0	0/0:13,0:13:30.05:0,30,371	0/0:8,0:8:14.89:0,15,176	0/0:25,0:25:69.21:0,69,906	0/0:15,0:15:42.12:0,42,552	0/0:26,0:26:69.19:0,69,906	1/1:7,20:27:65.19:1131,65,0	0/0:17,0:17:42.13:0,42,552	0/0:29,0:29:84.27:0,84,1104	0/0:25,0:25:66.19:0,66,853	1/1:3,0:23:45.15:641,45,0	0/0:19,0:19:54.15:0,54,695	0/0:17,0:17:51.15:0,51,656	0/0:18,0:18:51.16:0,51,670	0/0:17,0:17:51.17:0,51,670	0/0:27,0:27:69.19:0,69,887	0/0:20,0:20:54.12:0,54,686	1/1:7,13:20:45.09:834,45,0	1/1:4,17:24:57.12:1033,57,0	1/1:5,5:12:14.97:221,15,0	0/0:24,0:24:51.13:0,51,669	0/0:19,0:19:42.11:0,42,537	0/0:28,0:28:72.19:0,72,945	0/0:30,0:30:81.22:0,81,1048	0/0:19,0:19:51.16:0,51,670	1/1:5,29:35:69.19:1353,69,0	0/0:13,0:13:36.11:0,36,473
chr10	107109499	.	AT	A	1843.51	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.899;DP=587;FS=13.471;HRun=9;HaplotypeScore=60.7497;InbreedingCoeff=0.9990;MQ=79.73;MQ0=0;MQRankSum=0.180;QD=20.95;ReadPosRankSum=-1.555;VQSLOD=2.6808;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,159,1794	0/0:20,0:20:57.16:0,57,649	0/0:15,0:15:24.07:0,24,276	0/0:15,0:15:27.08:0,27,308	0/0:16,0:16:42.12:0,42,484	0/0:18,0:18:51.15:0,51,589	0/0:18,0:18:48.14:0,48,554	1/1:6,17:23:51:462,51,0	0/0:14,0:14:36.09:0,36,405	0/0:22,0:22:57.17:0,57,658	0/0:12,0:12:36.11:0,36,415	0/0:18,0:18:48.13:0,48,544	0/0:19,0:19:54.15:0,54,610	0/0:22,0:22:66.15:0,66,740	0/0:19,0:19:51.15:0,51,589	0/0:19,0:19:51.11:0,51,566	0/0:48,0:48:99:0,138,1582	0/0:18,0:18:48.14:0,48,554	1/1:3,17:20:50.98:459,51,0	1/1:0,21:21:57.02:522,57,0	1/1:2,11:13:33.01:302,33,0	0/0:18,0:18:42.12:0,42,476	0/0:20,0:20:54.16:0,54,623	0/0:29,1:30:53.78:0,54,873	0/0:19,0:19:51.14:0,51,581	0/0:22,0:22:63.19:0,63,727	1/1:1,10:11:30.02:274,30,0	0/0:18,0:18:51.15:0,51,588
chr10	107111013	.	C	CGT	524.02	PASS	AB=0.854;AC=14;AF=0.280;AN=50;BaseQRankSum=-1.341;DP=537;FS=11.380;HRun=0;HaplotypeScore=100.5234;InbreedingCoeff=0.4171;MQ=62.20;MQ0=6;MQRankSum=1.659;QD=2.91;ReadPosRankSum=0.617;VQSLOD=1.5437;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:33:25.22:0,25,199	0/0:3,0:5:5.68:0,6,28	./.	./.	0/0:21,0:23:14.43:0,14,94	0/0:15,0:15:8.98:0,9,73	0/0:23,0:26:29.67:0,30,258	1/1:18,0:18:0.93:1,1,0	0/1:11,4:15:52.25:76,0,52	0/0:20,0:20:11.77:0,12,107	0/0:12,0:12:9.02:0,9,96	0/0:26,0:27:8.27:0,8,42	0/0:18,0:18:15:0,15,139	0/1:22,2:23:42.03:97,0,42	0/1:12,0:13:2.16:2,0,123	0/0:14,0:13:11.71:0,12,120	0/0:30,0:29:53.81:0,54,527	0/0:16,0:17:26.69:0,27,248	./.	0/0:14,0:19:6.43:0,6,24	0/1:28,0:28:0:0,0,0	0/1:7,3:11:0.03:0,0,0	1/1:12,0:12:9.01:97,9,0	1/1:15,7:22:12.04:177,12,0	1/1:12,3:17:9.03:133,9,0	0/0:18,0:18:5.96:0,6,52	0/0:14,0:22:15.76:0,16,74	0/1:10,7:17:5.04:79,0,5
chr10	107111057	.	TGTGA	T	230.65	PASS	AB=0.944;AC=5;AF=0.089;AN=56;BaseQRankSum=8.863;DP=461;FS=24.825;HRun=0;HaplotypeScore=90.8367;InbreedingCoeff=-0.1192;MQ=57.30;MQ0=12;MQRankSum=-4.654;QD=4.12;ReadPosRankSum=-3.423;VQSLOD=-0.5061;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:30:38.57:0,39,758	0/1:4,0:4:35.98:46,0,36	0/0:24,0:13:12.15:0,12,234	0/0:23,0:11:12.98:0,13,150	0/1:14,0:14:45.33:45,0,235	0/0:12,0:12:9.88:0,10,251	0/0:26,0:26:65.01:0,65,936	0/0:24,0:23:68.81:0,69,589	0/0:13,0:13:33.03:0,33,485	0/0:18,0:18:53.67:0,54,823	0/0:9,0:9:18.05:0,18,402	0/1:8,5:13:99:190,0,139	0/0:10,0:9:16.39:0,16,310	0/0:13,0:12:32.33:0,32,464	0/0:14,0:13:35.83:0,36,522	0/0:16,0:16:36.01:0,36,462	0/0:35,0:34:69.48:0,69,1581	0/0:15,0:14:15.93:0,16,599	0/0:12,0:11:32.93:0,33,276	0/1:9,0:9:42.19:42,0,65	0/0:25,0:24:40.11:0,40,328	0/0:8,0:8:1.51:0,2,96	0/0:11,0:11:27.03:0,27,481	0/0:20,0:20:47.96:0,48,614	0/0:19,0:18:37.59:0,38,498	0/0:20,0:20:32.13:0,32,749	0/1:16,0:16:23.64:24,0,144	0/0:8,0:8:3.82:0,4,94
chr10	107111208	.	ATTCT	A	195.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.399;DP=463;FS=1.495;HRun=0;HaplotypeScore=85.1530;InbreedingCoeff=0.9458;MQ=69.25;MQ0=9;MQRankSum=-4.118;QD=24.44;ReadPosRankSum=-1.698;VQSLOD=3.3097;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.09:0,75,1435	0/0:9,0:9:27.09:0,27,640	0/0:40,0:11:21.36:0,21,297	0/0:30,0:11:18.35:0,18,270	0/0:24,0:23:66.17:0,66,1335	0/0:13,0:13:39.13:0,39,980	0/0:9,0:8:27.09:0,27,554	0/0:33,0:33:68.24:0,68,632	0/0:12,0:12:36.08:0,36,742	0/0:19,0:19:54.18:0,54,1311	0/0:15,0:15:42.09:0,42,858	1/1:1,7:8:15.05:284,15,0	0/0:10,0:10:26.99:0,27,508	0/0:15,0:15:36.07:0,36,712	0/0:9,0:9:24.08:0,24,544	0/0:12,0:12:36.08:0,36,752	0/0:28,0:28:81.18:0,81,1741	0/0:12,0:12:36.11:0,36,806	0/0:10,0:10:27.48:0,27,180	0/0:20,0:20:40.17:0,40,350	0/0:7,0:7:14.84:0,15,103	0/0:9,0:9:27.08:0,27,628	0/0:12,0:12:33.09:0,33,661	0/0:10,0:10:24.05:0,24,485	0/0:14,0:14:42.13:0,42,995	0/0:18,0:18:54.18:0,54,1240	0/0:29,0:29:66.54:0,67,405	0/0:8,0:8:24.08:0,24,566
chr10	107111222	.	TTTA	T	2868.14	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.494;DP=501;FS=0.000;HRun=0;HaplotypeScore=78.6151;InbreedingCoeff=0.9480;MQ=79.24;MQ0=10;MQRankSum=-0.468;QD=31.52;ReadPosRankSum=-0.574;VQSLOD=3.6936;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.21:0,63,1166	0/0:10,0:10:30.05:0,30,413	0/0:58,0:22:8.50:0,9,321	0/0:49,0:21:25.46:0,25,352	0/0:24,0:24:62.92:0,63,1166	0/0:16,0:16:48.16:0,48,954	0/0:8,0:7:19.80:0,20,387	1/1:4,23:27:61.64:863,62,0	0/0:11,0:11:30.09:0,30,600	0/0:22,0:22:66.20:0,66,1223	0/0:16,0:16:45.07:0,45,835	0/0:6,0:6:5.45:0,5,17	0/0:7,0:7:21.06:0,21,419	0/0:15,0:15:45.14:0,45,857	0/0:10,0:10:30.08:0,30,545	0/0:11,0:11:33.11:0,33,703	0/0:29,0:29:83.98:0,84,1656	0/0:14,0:14:42.13:0,42,848	1/1:0,13:13:38.94:430,39,0	1/1:2,18:20:53.98:736,54,0	1/1:0,7:7:12.04:186,12,0	0/0:12,0:12:36.10:0,36,592	0/0:11,0:11:33.09:0,33,551	0/0:10,0:10:21.07:0,21,447	0/0:18,0:18:54.16:0,54,1042	0/0:21,0:21:63.19:0,63,1099	1/1:0,24:24:54.18:825,54,0	0/0:8,0:8:24.08:0,24,474
chr10	107111224	.	T	TA	230.73	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.223;DP=506;FS=0.972;HRun=6;HaplotypeScore=74.2380;InbreedingCoeff=0.8289;MQ=79.92;MQ0=9;MQRankSum=1.418;QD=20.98;ReadPosRankSum=-0.721;VQSLOD=2.8126;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:50.96:0,51,474	1/1:1,10:11:29.99:325,30,0	0/0:56,0:22:15.54:0,16,135	0/0:50,0:22:8.05:0,8,142	0/0:23,0:23:56.97:0,57,527	0/0:16,0:16:42.03:0,42,403	0/0:8,0:7:19.22:0,19,173	0/0:27,0:27:41.58:0,42,152	0/0:11,0:11:29.97:0,30,283	0/0:22,0:22:54.06:0,54,523	0/0:16,0:16:41.17:0,41,389	0/0:7,0:7:14.88:0,15,107	0/0:7,0:7:21.02:0,21,205	0/0:16,0:16:39.02:0,39,369	0/0:11,0:11:29.96:0,30,273	0/0:11,0:11:33.06:0,33,329	0/0:29,0:29:63.08:0,63,680	0/0:15,0:15:45:0,45,422	0/0:13,0:13:24.25:0,24,104	0/0:20,0:20:42:0,42,155	0/0:7,0:7:8.88:0,9,28	0/0:12,0:12:26.96:0,27,241	0/0:11,0:11:26.90:0,27,235	0/0:12,0:12:13.40:0,13,149	0/0:18,0:18:50.99:0,51,475	0/0:20,0:20:41.58:0,42,386	0/0:24,0:24:40.58:0,41,136	0/0:8,0:8:20.98:0,21,200
chr10	107111962	.	T	TG	5960.09	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-4.084;DP=589;FS=3.799;HRun=1;HaplotypeScore=61.8061;InbreedingCoeff=0.9989;MQ=88.29;MQ0=0;MQRankSum=0.455;QD=44.48;ReadPosRankSum=-1.093;VQSLOD=4.4458;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1657	1/1:1,9:10:24.08:381,24,0	0/0:21,0:21:57.17:0,57,755	0/0:23,0:23:55.66:0,56,648	0/0:20,0:20:57.18:0,57,780	0/0:21,0:21:63.21:0,63,881	0/0:25,0:25:75.25:0,75,1046	1/1:1,23:25:72.23:1119,72,0	0/0:22,0:22:66.21:0,66,904	0/0:21,0:21:63.21:0,63,876	0/0:8,0:8:24.08:0,24,336	0/0:22,0:22:63.20:0,63,866	0/0:10,0:10:27.09:0,27,378	0/0:22,0:22:66.22:0,66,922	0/0:22,0:22:66.22:0,66,921	0/0:13,0:13:39.13:0,39,546	0/0:29,0:29:84.28:0,84,1175	0/0:20,0:20:60.20:0,60,839	1/1:0,14:14:42.14:672,42,0	1/1:0,19:19:51.17:815,51,0	1/1:0,43:43:99:1918,120,0	0/0:26,0:26:78.24:0,78,1058	0/0:17,0:17:51.17:0,51,713	0/0:18,0:18:51.16:0,51,697	0/0:12,0:12:36.12:0,36,502	0/0:30,0:30:87.28:0,87,1200	1/1:0,23:23:66.23:1055,66,0	0/0:13,0:13:39.13:0,39,545
chr10	107112545	.	GA	G	1601.88	PASS	AB=0.803;AC=13;AF=0.232;AN=56;BaseQRankSum=7.222;DP=520;FS=0.933;HRun=10;HaplotypeScore=62.2252;InbreedingCoeff=0.6996;MQ=73.95;MQ0=1;MQRankSum=-0.049;QD=12.23;ReadPosRankSum=-1.663;VQSLOD=2.9106;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:41:93.97:0,94,1011	1/1:1,0:4:6.11:18,6,0	0/0:27,0:27:16.51:0,17,336	0/1:20,2:20:48.24:48,0,120	0/0:12,0:13:35.92:0,36,370	0/0:20,0:21:50.82:0,51,487	0/0:20,0:21:63:0,63,678	1/1:4,12:16:31.82:252,32,0	0/1:10,1:11:1.99:2,0,208	0/0:31,0:31:57.10:0,57,609	0/0:9,0:11:23.71:0,24,218	0/0:8,0:9:26.94:0,27,280	0/0:18,1:19:22.02:0,22,445	0/0:20,0:20:43.07:0,43,425	0/0:10,0:10:30.08:0,30,332	0/0:15,0:15:16.11:0,16,375	0/0:30,0:30:60.62:0,61,827	0/0:25,1:26:43.07:0,43,679	1/1:6,19:25:59.95:520,60,0	1/1:3,7:10:18.76:178,19,0	0/1:5,15:20:43.47:291,0,43	0/0:10,0:10:24.06:0,24,258	0/0:8,0:8:21.06:0,21,232	0/0:22,2:25:16.90:0,17,611	0/0:15,0:15:39.10:0,39,424	0/0:23,0:23:63.13:0,63,677	1/1:3,19:22:53.98:469,54,0	0/0:13,0:13:36.10:0,36,398
chr10	107112792	.	TA	T	1702.55	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=9.059;DP=362;FS=0.531;HRun=8;HaplotypeScore=42.7854;InbreedingCoeff=0.9251;MQ=55.92;MQ0=14;MQRankSum=-11.437;QD=21.02;ReadPosRankSum=-2.906;VQSLOD=2.2586;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:53.64:0,54,715	1/1:2,3:5:9.01:87,9,0	0/0:19,1:8:12.07:0,12,114	0/0:12,0:3:9:0,9,107	0/0:13,0:13:30.09:0,30,361	0/0:17,0:17:48.14:0,48,570	0/0:11,0:10:18.06:0,18,218	1/1:8,13:18:48.07:458,48,0	0/0:9,0:8:21.06:0,21,253	0/0:19,0:19:45.13:0,45,532	0/0:13,0:13:30.07:0,30,341	1/1:0,3:3:9.01:87,9,0	0/0:7,0:7:15.05:0,15,181	0/0:5,0:5:15.05:0,15,181	0/0:7,0:6:15.05:0,15,181	0/0:10,0:10:27.08:0,27,326	0/0:23,0:22:63.19:0,63,759	0/0:18,0:18:48.15:0,48,577	1/1:5,9:13:30:280,30,0	1/1:1,13:14:39.05:371,39,0	1/1:0,2:2:6.01:57,6,0	./.	0/0:7,0:7:15.05:0,15,181	0/0:6,0:5:15.05:0,15,180	0/0:20,0:20:54.12:0,54,617	0/0:16,0:15:36.11:0,36,434	1/1:2,20:22:57.09:548,57,0	0/0:20,0:18:54.17:0,54,652
chr10	107112809	.	TA	T	1128.81	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.808;DP=403;FS=1.145;HRun=12;HaplotypeScore=51.1807;InbreedingCoeff=0.8745;MQ=63.71;MQ0=5;MQRankSum=-7.546;QD=12.54;ReadPosRankSum=-0.420;VQSLOD=3.1571;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:32:42.82:0,43,581	1/1:2,0:8:8.14:24,8,0	0/0:22,0:12:13.64:0,14,128	0/0:12,0:5:11.04:0,11,106	0/0:13,1:16:18.56:0,19,340	0/0:18,1:19:27.87:0,28,464	0/0:9,0:9:21.04:0,21,213	1/1:7,19:25:56.71:436,57,0	0/0:11,0:11:33.01:0,33,317	0/0:18,0:18:42.08:0,42,422	0/0:10,1:11:3.90:0,4,207	0/0:4,0:4:11.98:0,12,111	0/0:5,0:5:12.02:0,12,122	0/0:7,0:7:18.04:0,18,183	0/0:8,0:8:21:0,21,202	0/0:12,0:12:21.02:0,21,201	0/0:23,3:26:16.64:0,17,525	0/0:16,1:17:21.84:0,22,396	1/1:5,11:17:34.87:259,35,0	1/1:2,11:14:31.91:238,32,0	1/1:2,1:3:2.98:23,3,0	0/0:5,1:6:12:0,12,109	0/0:7,0:8:23.88:0,24,227	0/0:6,0:6:18.04:0,18,183	0/0:21,0:21:54.11:0,54,548	0/0:13,2:15:12.82:0,13,307	1/1:3,18:21:41.80:325,42,0	0/0:27,1:26:51.87:0,52,679
chr10	107113202	.	GTA	G	275.40	PASS	AB=0.861;AC=5;AF=0.089;AN=56;BaseQRankSum=8.905;DP=1051;FS=5.622;HRun=0;HaplotypeScore=270.8244;InbreedingCoeff=-0.0963;MQ=64.96;MQ0=1;MQRankSum=-5.597;QD=1.40;ReadPosRankSum=-5.349;VQSLOD=1.0678;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:62,2:64:99:0,136,2419	0/0:11,0:11:24.08:0,24,439	0/1:27,2:29:37.94:38,0,1184	0/0:22,0:22:38.24:0,38,834	0/0:27,7:34:61.75:0,62,1060	0/1:28,7:35:10.37:10,0,1188	0/0:33,5:38:74.42:0,74,1312	0/0:28,1:28:56.84:0,57,1129	0/0:26,3:29:75.08:0,75,1236	0/1:55,9:64:99:196,0,2476	0/0:45,8:53:70.76:0,71,1310	0/0:29,6:35:58.66:0,59,1324	0/0:30,6:36:83.41:0,83,1434	0/0:35,10:45:78.43:0,78,1409	0/0:48,7:55:99:0,119,2080	0/0:42,13:55:56.91:0,57,1656	0/0:16,1:17:45.10:0,45,758	0/0:20,1:21:39.45:0,39,905	0/0:22,0:19:54.16:0,54,899	0/0:43,1:44:78.26:0,78,1427	0/0:66,5:71:99:0,180,3143	0/0:35,4:39:61.91:0,62,1112	0/0:29,9:38:44.54:0,45,930	0/0:26,2:28:60.18:0,60,1061	0/0:36,4:40:65.22:0,65,1171	0/1:43,3:46:25.92:26,0,1679	0/0:28,0:28:75.23:0,75,1288	0/1:14,9:23:99:120,0,647
chr10	107116145	.	GA	G	1332.08	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.652;DP=456;FS=3.421;HRun=8;HaplotypeScore=50.6637;InbreedingCoeff=0.9566;MQ=54.07;MQ0=18;MQRankSum=0.820;QD=16.24;ReadPosRankSum=-0.446;VQSLOD=3.3945;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:72.10:0,72,821	0/0:7,0:7:21.06:0,21,253	0/0:14,0:6:6.02:0,6,137	0/0:21,0:8:21.95:0,22,249	0/0:32,0:32:63.14:0,63,727	0/0:12,0:12:24.03:0,24,264	0/0:14,0:14:27:0,27,293	1/1:6,12:18:44.91:412,45,0	0/0:11,0:11:24.04:0,24,274	0/0:21,0:20:45.14:0,45,541	0/0:22,0:22:45.10:0,45,527	0/0:12,0:12:18.05:0,18,207	0/0:8,0:8:15.05:0,15,181	0/0:13,0:13:20.98:0,21,221	0/0:17,0:17:24.02:0,24,264	0/0:12,0:12:33.06:0,33,382	0/0:22,0:22:48.13:0,48,558	0/0:16,0:16:27.06:0,27,312	1/1:9,11:20:33.03:312,33,0	1/1:4,13:16:24.02:232,24,0	1/1:4,7:8:18.02:174,18,0	0/0:5,0:5:12.04:0,12,145	0/0:19,0:19:54.11:0,54,625	0/0:10,0:10:27.02:0,27,298	0/0:24,0:24:63.19:0,63,761	0/0:18,0:16:48.13:0,48,567	1/1:3,13:16:39.05:376,39,0	0/0:11,0:11:33.10:0,33,399
chr10	107117473	.	TA	T	2720.10	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.914;DP=491;FS=2.922;HRun=9;HaplotypeScore=53.0577;InbreedingCoeff=0.8968;MQ=69.02;MQ0=0;MQRankSum=-1.400;QD=22.48;ReadPosRankSum=-2.281;VQSLOD=3.6134;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.24:0,90,1019	0/0:4,0:4:12.04:0,12,139	0/0:5,0:5:3.20:0,3,59	0/0:9,0:9:5:0,5,157	0/0:26,0:26:66.17:0,66,742	0/0:14,0:14:39.06:0,39,434	0/0:19,0:19:51.15:0,51,588	1/1:5,29:34:87.03:791,87,0	0/0:12,0:12:5.74:0,6,319	0/0:19,0:19:39.12:0,39,450	0/0:21,0:21:63.19:0,63,727	0/0:15,0:15:39.11:0,39,448	0/0:15,0:15:39.12:0,39,450	0/0:8,0:8:24.07:0,24,277	0/0:18,0:18:39.12:0,39,450	0/0:13,0:13:39.12:0,39,450	0/0:28,0:28:78.17:0,78,874	0/0:24,1:25:35.66:0,36,636	1/1:0,21:21:63:565,63,0	1/1:1,22:23:63.03:576,63,0	1/1:1,13:14:36.02:330,36,0	0/0:4,0:4:12.03:0,12,130	0/0:15,0:15:40.36:0,40,453	0/0:10,0:10:30.09:0,30,346	0/0:19,0:19:54.16:0,54,623	0/0:30,0:31:84.07:0,84,941	1/1:2,27:29:69.04:631,69,0	0/0:7,0:7:21.06:0,21,242
chr10	107117673	.	C	CAAA	2158.56	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=11.256;DP=499;FS=1.620;HRun=11;HaplotypeScore=70.1360;InbreedingCoeff=0.8598;MQ=57.32;MQ0=5;MQRankSum=-1.025;QD=11.80;ReadPosRankSum=-1.491;VQSLOD=0.3550;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:70.58:0,71,820	1/1:8,0:8:13.72:67,14,0	0/1:34,0:10:4.44:4,0,41	0/1:26,0:7:1.28:4,0,1	0/0:24,0:23:55.71:0,56,649	0/0:15,0:16:31.38:0,31,358	0/0:16,0:16:42.09:0,42,490	1/1:27,0:24:53.96:618,54,0	0/0:19,0:19:45.07:0,45,514	0/0:28,0:26:64.06:0,64,742	0/0:23,0:23:63.17:0,63,723	1/1:2,12:15:12.04:213,12,0	0/0:8,0:8:21.04:0,21,238	0/0:5,0:5:15.04:0,15,174	0/0:14,0:14:33.08:0,33,384	0/0:14,0:14:36.09:0,36,419	0/0:22,0:22:44.34:0,44,446	0/0:16,0:17:38.34:0,38,454	1/1:15,0:12:20.89:225,21,0	1/1:23,0:23:45.05:533,45,0	1/1:5,0:5:6.02:74,6,0	0/0:7,0:8:19.62:0,20,242	0/0:19,0:19:48.02:0,48,550	0/0:14,0:14:22.63:0,23,309	0/0:10,0:10:27.06:0,27,304	0/0:19,0:19:48.09:0,48,560	1/1:30,0:30:48.15:612,48,0	0/0:11,0:11:21:0,21,245
chr10	107117679	.	A	AAAC	3623.33	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=-7.808;DP=509;FS=0.000;HRun=0;HaplotypeScore=66.2756;InbreedingCoeff=0.7629;MQ=57.91;MQ0=6;MQRankSum=-1.678;QD=27.45;ReadPosRankSum=-0.908;VQSLOD=3.0476;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.04:0,87,1264	0/1:8,0:8:2.27:2,0,56	0/0:34,0:7:7.20:0,7,89	0/0:30,0:8:3.38:0,3,35	0/0:21,0:20:59.99:0,60,924	0/0:14,0:14:38.90:0,39,546	0/0:17,0:17:48.14:0,48,726	1/1:4,27:31:71.98:1114,72,0	0/0:17,0:17:51.15:0,51,770	0/0:27,0:25:72.10:0,72,1097	0/0:23,0:23:69.22:0,69,1063	0/1:14,0:14:9.52:90,0,10	0/0:8,0:8:21.07:0,21,336	0/0:6,0:6:18.05:0,18,260	0/0:14,0:14:39.11:0,39,581	0/0:14,0:14:39.12:0,39,603	0/0:22,0:22:63.07:0,63,804	0/0:17,0:17:47.94:0,48,681	1/1:8,9:13:26.93:440,27,0	1/1:5,18:25:50.96:878,51,0	1/1:0,5:5:6.01:124,6,0	0/0:9,0:9:26.87:0,27,374	0/0:19,0:19:57.17:0,57,846	0/0:13,0:13:25.31:0,25,451	0/0:12,0:12:36.10:0,36,515	0/0:19,0:19:57.14:0,57,844	1/1:3,25:29:48.14:976,48,0	0/0:11,0:11:21.07:0,21,337
chr10	107117689	.	A	AAC	59.06	PASS	AB=0.615;AC=1;AF=0.018;AN=56;BaseQRankSum=4.610;DP=493;FS=6.645;HRun=0;HaplotypeScore=69.5501;InbreedingCoeff=0.4394;MQ=56.95;MQ0=5;MQRankSum=-3.411;QD=7.38;ReadPosRankSum=-0.839;VQSLOD=2.1818;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.25:0,87,1276	0/1:3,3:8:0.64:133,0,1	0/0:30,0:9:17.35:0,17,170	0/0:23,0:7:4.81:0,5,50	0/0:24,0:23:69.20:0,69,986	0/0:13,0:13:35.90:0,36,493	0/0:17,0:17:51.17:0,51,771	0/0:34,0:31:69.16:0,69,828	0/0:15,0:15:42.13:0,42,616	0/0:27,0:25:75.24:0,75,1084	0/0:23,0:23:69.21:0,69,1004	0/0:12,0:12:7.90:0,8,76	0/0:10,0:10:27.09:0,27,406	0/0:7,0:7:21.07:0,21,318	0/0:16,0:16:48.15:0,48,706	0/0:15,0:15:45.15:0,45,663	0/0:23,0:23:61.63:0,62,858	0/0:17,0:17:51.17:0,51,733	0/0:14,0:12:18.28:0,18,308	0/0:19,0:19:57.06:0,57,757	0/0:3,0:3:9.03:0,9,133	0/0:9,0:9:27.08:0,27,390	0/0:21,0:21:63.21:0,63,948	0/0:13,0:13:33.09:0,33,460	0/0:14,0:14:42.14:0,42,617	0/0:20,0:20:60.18:0,60,869	0/0:29,0:29:55.65:0,56,758	0/0:7,0:7:21.07:0,21,318
chr10	107118356	.	T	TGG	5696.99	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-12.129;DP=533;FS=5.762;HRun=3;HaplotypeScore=65.6543;InbreedingCoeff=0.9896;MQ=89.00;MQ0=0;MQRankSum=-1.116;QD=45.94;ReadPosRankSum=-0.419;VQSLOD=3.9148;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,1417	1/1:1,6:7:15.05:281,15,0	0/0:15,0:15:39.13:0,39,556	0/0:26,0:26:67.94:0,68,970	0/0:16,0:16:48.16:0,48,690	0/0:13,0:13:39.13:0,39,573	0/0:24,0:24:66.21:0,66,941	1/1:2,22:24:66.20:1145,66,0	0/0:16,0:16:45.15:0,45,660	0/0:23,0:23:66.22:0,66,967	0/0:16,0:16:48.16:0,48,700	0/0:14,0:14:42.14:0,42,614	0/0:21,0:21:60.18:0,60,862	0/0:19,0:19:51.16:0,51,729	0/0:22,0:22:66.21:0,66,945	0/0:16,0:16:39.12:0,39,554	0/0:27,0:27:81.25:0,81,1168	0/0:18,0:18:48.16:0,48,705	1/1:2,13:14:36.12:658,36,0	1/1:0,12:13:24.08:438,24,0	1/1:1,44:45:99:2237,120,0	0/0:15,0:15:42.14:0,42,616	0/0:8,0:8:24.08:0,24,352	0/0:19,0:19:54.17:0,54,775	0/0:18,0:18:51.17:0,51,745	0/0:22,0:22:63.21:0,63,925	1/1:0,20:20:51.17:939,51,0	0/0:5,0:5:12.02:0,12,155
chr10	107118593	.	GA	G	1462.55	PASS	AB=0.595;AC=12;AF=0.214;AN=56;BaseQRankSum=6.264;DP=690;FS=4.461;HRun=10;HaplotypeScore=73.6169;InbreedingCoeff=0.7919;MQ=58.81;MQ0=15;MQRankSum=-1.011;QD=10.60;ReadPosRankSum=0.146;VQSLOD=2.9055;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:86.86:0,87,914	0/1:3,6:8:16.05:43,0,16	0/0:21,1:10:19.25:0,19,171	0/0:12,1:6:17.37:0,17,154	0/0:27,2:28:26.20:0,26,458	0/0:23,0:23:45.12:0,45,497	0/0:32,0:31:84.19:0,84,909	1/1:14,7:20:13.49:127,13,0	0/0:17,0:17:33.07:0,33,355	0/0:41,1:40:79.14:0,79,1052	0/0:22,0:20:45.07:0,45,472	1/1:7,18:22:38.98:339,39,0	0/0:26,0:26:49.28:0,49,486	0/0:18,0:18:39.09:0,39,422	0/0:25,0:25:57.14:0,57,623	0/0:24,0:24:54.12:0,54,575	0/0:38,0:37:87.04:0,87,925	0/0:26,0:26:57.13:0,57,615	0/1:8,18:25:6.39:405,0,6	1/1:9,16:23:26.86:234,27,0	1/1:2,4:5:12:104,12,0	0/0:33,0:32:61.96:0,62,650	0/0:20,0:20:38.47:0,38,406	0/0:29,0:28:72.10:0,72,761	0/0:18,0:18:42.06:0,42,444	0/0:39,0:36:65.82:0,66,824	1/1:11,15:21:44.88:389,45,0	0/0:12,0:12:12.02:0,12,124
chr10	107118695	.	TGATGGATGGATG	T	2084.85	PASS	AB=0.833;AC=11;AF=0.196;AN=56;BaseQRankSum=10.017;DP=777;FS=21.211;HRun=0;HaplotypeScore=243.8291;InbreedingCoeff=0.7910;MQ=58.66;MQ0=8;MQRankSum=-3.622;QD=16.04;ReadPosRankSum=-1.437;VQSLOD=1.1357;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:97.66:0,98,4105	0/1:4,1:5:38.62:117,0,39	0/0:41,0:32:30.03:0,30,618	0/0:41,0:35:32.14:0,32,962	0/0:12,0:12:30.09:0,30,1305	0/0:23,0:23:54.07:0,54,2165	0/0:32,0:32:75.63:0,76,2781	1/1:17,15:29:44.90:661,45,0	0/0:32,0:32:54.17:0,54,1977	0/0:31,0:30:69.22:0,69,3415	0/0:14,0:14:33.11:0,33,1460	0/0:13,0:32:2.94:0,3,67	0/0:32,0:32:66.23:0,66,3255	0/0:34,0:34:69.22:0,69,2857	0/0:35,0:35:57.20:0,57,2756	0/0:30,0:30:63.17:0,63,2384	0/0:45,0:45:99:0,111,4606	0/0:27,0:27:57.15:0,57,2598	1/1:12,7:17:17.99:345,18,0	1/1:4,5:9:6.02:140,6,0	1/1:12,25:36:4.29:63,4,0	0/0:21,0:21:48.16:0,48,1988	0/0:14,0:14:33.11:0,33,1474	0/0:43,0:43:93.29:0,93,4404	0/0:15,0:15:33.10:0,33,1286	0/0:28,0:29:72.23:0,72,2828	1/1:7,21:27:30.10:924,30,0	0/0:16,0:16:39.13:0,39,2107
chr10	107118949	.	GTGGA	G	2639.09	PASS	AB=0.781;AC=9;AF=0.180;AN=50;BaseQRankSum=11.734;DP=1011;FS=16.850;HRun=0;HaplotypeScore=135.2490;InbreedingCoeff=0.8514;MQ=41.10;MQ0=187;MQRankSum=-3.814;QD=13.26;ReadPosRankSum=0.062;VQSLOD=2.4839;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:38:72.25:0,72,1771	./.	./.	./.	0/0:29,0:27:54.19:0,54,1349	0/0:30,0:29:44.94:0,45,1027	0/0:39,0:29:35.85:0,36,779	1/1:19,9:14:18.01:205,18,0	0/0:55,0:54:99:0,111,2693	0/0:45,0:40:99:0,105,2514	0/0:21,0:19:33.11:0,33,830	0/0:40,0:40:87.24:0,87,2122	0/0:33,0:32:48.13:0,48,1131	0/0:42,0:40:72.18:0,72,1703	0/0:62,0:59:96.16:0,96,2194	0/0:57,0:57:99:0,105,2343	0/0:35,0:28:45.15:0,45,1087	0/0:23,0:19:39.12:0,39,873	0/1:18,7:7:42.33:288,0,42	1/1:20,20:20:45.15:772,45,0	1/1:33,47:56:77.97:1321,78,0	0/0:45,0:41:57.20:0,57,1415	0/0:19,0:16:21.07:0,21,528	0/0:40,0:38:45.05:0,45,1007	0/0:21,0:19:36.12:0,36,906	0/0:43,0:35:88.03:0,88,2011	1/1:13,13:13:13.75:210,14,0	0/0:9,0:6:15.05:0,15,364
chr10	107119277	.	GTGGA	G	191.98	PASS	AB=0.694;AC=1;AF=0.020;AN=50;BaseQRankSum=5.038;DP=1070;FS=0.000;HRun=0;HaplotypeScore=115.7886;InbreedingCoeff=-0.0352;MQ=37.29;MQ0=257;MQRankSum=-3.909;QD=5.65;ReadPosRankSum=1.025;VQSLOD=2.4247;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:40:51.17:0,51,1239	0/1:19,15:14:99:266,0,234	./.	./.	0/0:29,0:26:39.13:0,39,944	0/0:17,0:12:21.07:0,21,454	0/0:26,0:22:24.04:0,24,532	0/0:45,0:22:28.92:0,29,496	0/0:47,0:46:90.04:0,90,2103	0/0:66,0:56:99:0,153,3514	0/0:14,0:10:15.05:0,15,372	0/0:48,0:46:63.27:0,63,1777	0/0:34,0:34:78.17:0,78,1855	0/0:27,0:27:38.98:0,39,866	0/0:45,0:41:93.11:0,93,2134	0/0:50,0:48:99:0,99,2197	0/0:34,0:29:51.12:0,51,1158	0/0:33,0:32:17.68:0,18,1055	0/0:20,0:9:21.06:0,21,360	0/0:45,0:20:3.01:0,3,68	0/0:117,0:38:6.42:0,6,87	0/0:31,0:24:36.12:0,36,895	0/0:20,0:16:36.12:0,36,861	0/0:37,0:35:57.20:0,57,1430	0/0:29,0:19:24.08:0,24,603	0/0:53,0:44:99:0,111,2631	./.	0/0:9,0:3:9.03:0,9,195
chr10	107119716	.	G	GCACA	4070.20	PASS	AB=0.797;AC=14;AF=0.250;AN=56;BaseQRankSum=-4.216;DP=685;FS=0.907;HRun=0;HaplotypeScore=119.7260;InbreedingCoeff=0.7632;MQ=63.64;MQ0=4;MQRankSum=0.075;QD=22.49;ReadPosRankSum=-2.668;VQSLOD=2.8840;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:51:96.30:0,96,1543	1/1:7,0:7:2.80:13,3,0	0/0:34,0:25:14.31:0,14,405	0/1:22,0:13:23.52:24,0,136	0/0:15,0:15:30.09:0,30,473	0/0:20,0:20:34.51:0,35,631	0/0:22,0:23:48.16:0,48,776	1/1:8,15:29:62.85:1137,63,0	0/0:24,0:25:69.18:0,69,1093	0/0:26,0:26:66.14:0,66,988	0/0:14,0:14:27.08:0,27,419	0/1:7,0:22:16.29:111,0,16	0/0:15,0:17:45.09:0,45,677	0/0:24,0:26:11.23:0,11,829	0/0:24,0:25:55.73:0,56,881	0/0:20,0:21:53.94:0,54,847	0/0:34,0:37:83.81:0,84,1192	0/0:29,0:31:75.13:0,75,1221	1/1:9,11:19:38.99:701,39,0	1/1:2,10:13:15.05:370,15,0	1/1:13,26:50:62.87:1187,63,0	0/0:20,0:22:45.15:0,45,720	0/0:17,0:17:33.07:0,33,514	0/0:40,0:40:87.25:0,87,1405	0/0:17,0:18:45.15:0,45,727	0/0:25,0:28:76.08:0,76,1167	1/1:7,8:16:23.82:529,24,0	0/0:13,0:13:33.11:0,33,537
chr10	107120831	.	G	GT	82.01	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.028;DP=720;FS=4.350;HRun=3;HaplotypeScore=66.2382;InbreedingCoeff=0.9673;MQ=87.15;MQ0=0;MQRankSum=-1.758;QD=13.67;ReadPosRankSum=-0.967;VQSLOD=2.2708;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,1641	1/1:1,5:6:12.03:168,12,0	0/0:28,0:28:75.17:0,75,863	0/0:20,0:20:50.96:0,51,573	0/0:14,0:14:36.07:0,36,406	0/0:11,0:11:30.08:0,30,348	0/0:33,0:33:87.27:0,87,1044	0/0:37,0:37:99:0,108,1278	0/0:29,0:29:84.25:0,84,997	0/0:25,0:25:72.19:0,72,848	0/0:13,0:13:39.09:0,39,452	0/0:28,0:28:78.24:0,78,935	0/0:18,0:18:54.17:0,54,648	0/0:16,0:16:45.12:0,45,528	0/0:22,0:22:66.19:0,66,780	0/0:22,0:22:60.18:0,60,720	0/0:44,0:44:99:0,117,1365	0/0:26,0:26:78.24:0,78,935	0/0:26,0:26:63.17:0,63,737	0/0:18,0:18:51.14:0,51,598	0/0:68,0:68:99:0,199,2373	0/0:22,0:22:54.16:0,54,648	0/0:19,0:19:54.14:0,54,624	0/0:37,0:37:99:0,102,1173	0/0:20,0:20:60.16:0,60,699	0/0:38,0:38:99:0,99,1176	0/0:22,0:22:66.20:0,66,791	0/0:10,0:10:30.09:0,30,360
chr10	107121233	.	A	AT	5367.36	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-12.561;DP=720;FS=0.353;HRun=3;HaplotypeScore=67.5966;InbreedingCoeff=0.9881;MQ=83.52;MQ0=0;MQRankSum=-3.684;QD=36.76;ReadPosRankSum=-0.780;VQSLOD=4.9294;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,171,2024	1/1:0,3:3:9.03:126,9,0	0/0:20,0:20:53.47:0,53,574	0/0:23,0:23:51.07:0,51,555	0/0:18,0:18:42.12:0,42,493	0/0:20,0:19:54.14:0,54,634	0/0:34,0:34:99:0,102,1211	1/1:2,24:26:72.22:973,72,0	0/0:32,0:32:93.27:0,93,1104	0/0:36,0:36:99:0,102,1214	0/0:16,0:16:45.14:0,45,540	0/0:27,0:27:75.20:0,75,877	0/0:15,0:15:42.13:0,42,504	0/0:28,0:28:78.24:0,78,936	0/0:29,0:29:87.27:0,87,1044	0/0:25,0:25:75.23:0,75,900	0/0:39,0:39:99:0,117,1404	0/0:27,0:27:75.19:0,75,884	1/1:1,14:15:42.14:588,42,0	1/1:1,21:22:63.13:839,63,0	1/1:0,49:49:99:1891,135,0	0/0:19,0:19:51.16:0,51,612	0/0:21,0:21:51.15:0,51,612	0/0:34,0:34:93.28:0,93,1116	0/0:17,0:17:48.15:0,48,576	0/0:20,0:20:54.12:0,54,632	1/1:4,27:31:69.22:951,69,0	0/0:16,0:16:39.10:0,39,455
chr10	107121350	.	AC	A	180.48	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.760;DP=714;FS=0.000;HRun=2;HaplotypeScore=69.0112;InbreedingCoeff=0.9879;MQ=87.78;MQ0=0;MQRankSum=-1.498;QD=25.78;ReadPosRankSum=-1.556;VQSLOD=2.8062;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,2088	1/1:0,7:7:21.07:273,21,0	0/0:32,0:32:78.31:0,78,1266	0/0:23,0:23:66.18:0,66,941	0/0:20,0:20:56.86:0,57,845	0/0:23,0:23:69.23:0,69,1034	0/0:38,0:38:99:0,114,1709	0/0:24,0:24:69.21:0,69,1012	0/0:27,0:27:81.25:0,81,1175	0/0:26,0:26:78.26:0,78,1157	0/0:16,0:16:48.16:0,48,717	0/0:15,0:15:45.15:0,45,673	0/0:19,0:19:54.18:0,54,807	0/0:26,0:26:75.25:0,75,1122	0/0:29,0:29:87.29:0,87,1303	0/0:28,0:28:84.27:0,84,1239	0/0:38,0:38:99:0,114,1707	0/0:28,0:28:84.28:0,84,1251	0/0:20,0:20:60.20:0,60,895	0/0:14,0:14:42.14:0,42,629	0/0:61,0:61:99:0,184,2680	0/0:27,0:27:81.27:0,81,1212	0/0:14,0:14:39.13:0,39,576	0/0:33,0:33:90.26:0,90,1318	0/0:28,0:28:84.28:0,84,1256	0/0:22,0:22:66.22:0,66,989	0/0:22,0:22:66.22:0,66,989	0/0:6,0:6:18.06:0,18,270
chr10	107122549	.	TCTCTCTCTCTCTCTCACACACACACACACA	T	1116.78	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=3.889;DP=450;FS=2.703;HRun=0;HaplotypeScore=243.9986;InbreedingCoeff=0.7183;MQ=46.88;MQ0=35;MQRankSum=-1.956;QD=15.51;ReadPosRankSum=-0.270;VQSLOD=2.1263;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:49.56:0,50,3462	0/0:6,0:6:9.03:0,9,547	0/0:4,0:1:3.01:0,3,160	0/0:16,0:4:2.20:0,2,267	0/0:18,0:18:33.10:0,33,2596	0/0:13,0:11:27.08:0,27,1626	0/0:27,0:22:36.78:0,37,2225	1/1:14,0:13:5.55:55,6,0	0/0:13,0:11:24.54:0,25,1386	0/0:13,0:12:33.11:0,33,2339	0/0:8,0:7:15.05:0,15,1260	0/0:12,0:12:21.54:0,22,1339	0/0:14,0:14:36.12:0,36,2762	0/0:10,0:9:21.07:0,21,1660	0/0:12,0:11:21.54:0,22,1658	0/0:16,0:15:39.11:0,39,3562	0/0:29,0:28:78.60:0,79,4878	0/0:16,0:14:42.14:0,42,2930	1/1:3,2:4:2.58:395,3,0	1/1:4,10:14:3.01:174,3,0	1/1:19,0:14:3.94:26,4,0	0/0:20,0:20:39.59:0,40,2687	0/0:16,0:16:36.11:0,36,2408	0/0:33,0:28:72.25:0,72,6427	0/0:19,0:18:36.06:0,36,2301	0/0:18,0:16:48.16:0,48,3674	1/1:9,11:20:7.44:602,7,0	0/0:14,0:13:34.31:0,34,1976
chr10	107122563	.	TCACACACACACACACA	T	963.02	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=6.786;DP=442;FS=5.650;HRun=0;HaplotypeScore=165.4072;InbreedingCoeff=0.7828;MQ=48.53;MQ0=33;MQRankSum=1.403;QD=17.20;ReadPosRankSum=-2.463;VQSLOD=1.9847;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:42.62:0,43,2510	0/0:4,0:4:9.03:0,9,395	./.	0/0:2,0:1:3.01:0,3,200	0/0:18,0:18:30.10:0,30,1964	0/0:7,0:5:12.04:0,12,719	0/0:28,0:24:22.07:0,22,1246	1/1:10,9:18:10.69:366,11,0	0/0:13,0:11:24.08:0,24,1356	0/0:13,0:12:24.08:0,24,1424	0/0:8,0:7:18.06:0,18,1228	0/0:10,0:10:12.04:0,12,800	0/0:15,0:15:33.11:0,33,2146	0/0:12,0:11:21.04:0,21,1184	0/0:12,0:11:20.66:0,21,930	0/0:17,0:16:35.49:0,35,2450	0/0:29,0:27:54.10:0,54,2919	0/0:19,0:17:42.14:0,42,2115	1/1:4,1:4:9.03:307,9,0	1/1:12,0:13:3.01:56,3,0	0/0:16,4:15:1.70:0,2,3	0/0:19,0:19:27.56:0,28,1856	0/0:20,0:20:42.14:0,42,2314	0/0:33,0:29:63.19:0,63,3490	0/0:21,0:20:39.13:0,39,2418	0/0:19,0:17:45.15:0,45,2420	1/1:16,1:18:8.24:368,8,0	0/0:11,0:10:24.08:0,24,1483
chr10	107124132	.	CTG	C	113.08	PASS	AB=0.939;AC=6;AF=0.111;AN=54;BaseQRankSum=3.565;DP=623;FS=0.974;HRun=0;HaplotypeScore=85.2103;InbreedingCoeff=0.1424;MQ=67.53;MQ0=10;MQRankSum=1.257;QD=1.24;ReadPosRankSum=0.408;VQSLOD=1.7198;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,4:36:23.20:0,23,688	0/0:4,0:5:2.99:0,3,24	./.	0/0:38,0:20:5.99:0,6,52	0/0:18,0:18:39.12:0,39,569	0/0:25,0:25:39:0,39,521	0/0:25,0:25:39.09:0,39,525	0/0:27,0:27:32.70:0,33,292	0/0:19,0:19:2.63:0,3,336	0/0:27,0:26:11.26:0,11,649	0/1:18,1:19:0.88:1,0,376	1/1:12,9:21:15.04:170,15,0	0/0:18,0:18:27.08:0,27,389	0/1:15,3:18:34.98:35,0,305	0/0:16,0:16:27.09:0,27,406	0/0:22,0:22:30.07:0,30,433	0/0:27,1:28:17.20:0,17,636	0/0:18,3:21:4.56:0,5,459	0/0:13,0:16:23.83:0,24,205	0/0:12,0:13:11.99:0,12,117	0/0:29,0:29:3.01:0,3,37	0/1:17,1:19:0.91:1,0,364	0/0:19,1:20:2.15:0,2,423	0/0:40,0:40:57.39:0,57,1025	0/1:14,0:14:15.78:16,0,181	0/0:23,0:23:30.08:0,30,408	0/0:9,0:13:5.99:0,6,49	0/0:19,0:19:6.50:0,6,342
chr10	107126433	.	T	TAC	798.06	PASS	AB=0.814;AC=9;AF=0.173;AN=52;BaseQRankSum=-1.732;DP=693;FS=9.461;HRun=0;HaplotypeScore=96.6058;InbreedingCoeff=0.0986;MQ=70.82;MQ0=12;MQRankSum=-0.120;QD=3.89;ReadPosRankSum=-0.682;VQSLOD=1.0419;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:25.89:0,26,413	0/0:9,0:9:3.01:0,3,33	./.	./.	0/0:20,0:20:14.86:0,15,138	0/1:21,0:23:21.30:21,0,137	0/0:26,0:31:26.48:0,26,276	1/1:25,0:24:14.91:141,15,0	0/0:26,0:28:32.68:0,33,292	0/1:26,1:27:23.88:24,0,156	0/0:11,0:13:11.86:0,12,112	0/0:12,0:21:27.79:0,28,133	0/0:14,0:17:20.89:0,21,210	0/0:21,0:24:20.89:0,21,211	0/0:20,0:20:18.03:0,18,188	0/0:18,0:19:32.69:0,33,310	0/0:33,0:33:47.87:0,48,491	0/0:22,0:26:36.49:0,36,395	0/1:13,3:16:50.45:100,0,50	0/1:6,5:11:18.59:121,0,19	0/1:35,18:52:55.65:283,0,56	0/0:20,0:20:15.01:0,15,154	0/0:12,0:12:9.43:0,9,77	0/0:39,0:39:50.93:0,51,520	0/0:18,0:18:17.88:0,18,178	0/1:15,7:24:2.29:157,0,2	0/1:16,9:23:92.49:92,0,101	0/0:19,0:19:17.88:0,18,176
chr10	107128092	.	G	GTA	145.36	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.667;DP=809;FS=0.000;HRun=0;HaplotypeScore=98.8005;InbreedingCoeff=0.9088;MQ=54.44;MQ0=35;MQRankSum=0.504;QD=36.34;ReadPosRankSum=-0.707;VQSLOD=5.5387;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,123,1848	1/1:0,4:4:12.04:231,12,0	0/0:46,0:9:8.74:0,9,271	0/0:62,0:15:38.18:0,38,497	0/0:13,0:13:39.12:0,39,570	0/0:25,0:24:66.13:0,66,961	0/0:36,0:36:93.26:0,93,1392	0/0:56,0:55:99:0,147,2118	0/0:26,0:26:75.22:0,75,1097	0/0:22,0:19:57.17:0,57,816	0/0:16,0:16:42.11:0,42,598	0/0:28,0:28:69.22:0,69,1031	0/0:14,0:14:42.11:0,42,594	0/0:26,0:26:72.23:0,72,1079	0/0:32,0:32:90.27:0,90,1333	0/0:25,0:25:69.22:0,69,1034	0/0:39,0:40:93.75:0,94,1377	0/0:31,0:31:87:0,87,1223	0/0:24,0:17:51.14:0,51,732	0/0:27,0:27:72.24:0,72,1097	0/0:56,0:56:99:0,153,2177	0/0:16,0:16:48.15:0,48,707	0/0:14,0:14:36.06:0,36,524	0/0:44,0:44:99:0,126,1879	0/0:10,0:10:24.08:0,24,367	0/0:25,0:21:60.17:0,60,856	0/0:30,0:29:78.21:0,78,1166	0/0:14,0:14:39.10:0,39,548
chr10	107128217	.	AAAAATAAAATAAAATAAAAT	A	2540.31	PASS	AC=8;AF=0.174;AN=46;BaseQRankSum=7.027;DP=428;FS=4.703;HRun=0;HaplotypeScore=220.4941;InbreedingCoeff=0.6491;MQ=66.36;MQ0=6;MQRankSum=-3.774;QD=21.71;ReadPosRankSum=-3.236;VQSLOD=2.1579;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:18.06:0,18,1352	0/0:9,0:9:9.02:0,9,370	./.	./.	0/0:19,0:19:27.08:0,27,1610	0/0:18,0:18:36.12:0,36,2957	0/0:6,0:6:9.02:0,9,387	1/1:27,0:26:3:27,3,0	0/0:13,0:13:6.01:0,6,301	0/0:19,0:19:18.06:0,18,963	0/0:14,0:14:15.05:0,15,1137	0/0:7,0:10:9.03:0,9,348	0/0:11,0:11:9.03:0,9,610	0/0:10,0:10:3.01:0,3,203	0/0:16,0:16:3.01:0,3,280	0/0:5,0:5:3.01:0,3,259	0/0:33,0:33:57.20:0,57,4874	0/0:11,0:10:18.06:0,18,1364	1/1:18,3:19:6.02:209,6,0	1/1:18,12:30:27.06:1053,27,0	./.	./.	0/0:8,0:8:3.01:0,3,81	./.	0/0:10,0:10:21.07:0,21,1631	0/0:21,0:20:12.04:0,12,813	1/1:28,11:39:27.09:1386,27,0	0/0:10,0:10:30.10:0,30,2781
chr10	107128886	.	CTGTCTTTCACTG	C	2909.04	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=7.692;DP=592;FS=10.838;HRun=0;HaplotypeScore=194.5374;InbreedingCoeff=0.9849;MQ=74.16;MQ0=5;MQRankSum=-3.490;QD=44.08;ReadPosRankSum=-2.110;VQSLOD=1.7432;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:39.15:0,39,2001	0/0:8,0:7:21.07:0,21,361	0/0:49,0:35:90.19:0,90,2150	0/0:55,0:28:75.18:0,75,1770	0/0:17,0:17:48.13:0,48,1356	0/0:21,0:21:36.26:0,36,1391	0/0:23,0:23:66.13:0,66,1788	1/1:3,14:17:42.12:798,42,0	0/0:21,0:21:51.18:0,51,1794	0/0:22,0:22:63.17:0,63,2215	0/0:21,0:21:51.14:0,51,1443	0/0:17,0:17:45.13:0,45,1509	0/0:10,0:10:24.08:0,24,830	0/0:22,0:22:60.08:0,60,1557	0/0:17,0:17:15.40:0,15,1397	0/0:21,0:21:57.18:0,57,1954	0/0:28,0:28:52.50:0,52,1882	0/0:12,0:12:15.46:0,15,842	1/1:0,13:13:38.67:643,39,0	./.	1/1:20,0:20:29.09:697,29,0	0/0:18,0:18:51.16:0,51,1596	0/0:17,0:17:45.15:0,45,1423	0/0:23,0:23:69.06:0,69,1964	0/0:15,0:15:42.14:0,42,1386	0/0:24,0:24:50.42:0,50,2137	1/1:16,0:16:14.53:929,15,0	0/0:22,0:22:51.09:0,51,1503
chr10	107131054	.	G	GTC	1557.53	PASS	AB=0.981;AC=7;AF=0.125;AN=56;BaseQRankSum=2.734;DP=853;FS=0.000;HRun=0;HaplotypeScore=133.0953;InbreedingCoeff=0.1616;MQ=55.85;MQ0=22;MQRankSum=-1.809;QD=8.42;ReadPosRankSum=-1.675;VQSLOD=3.1325;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:95.25:0,95,1153	0/1:12,0:12:5.26:91,0,5	0/0:16,0:12:30.06:0,30,333	0/0:21,0:13:32.92:0,33,297	0/0:21,0:21:59.80:0,60,652	0/0:19,0:18:44.25:0,44,495	0/0:38,0:34:80.90:0,81,925	0/1:37,0:35:99:392,0,173	0/0:32,0:31:86.97:0,87,1032	0/0:57,0:53:99:0,152,1566	0/0:14,0:14:27.01:0,27,303	0/0:25,0:25:40.38:0,40,495	0/0:26,0:25:72.05:0,72,870	0/0:29,0:28:78.05:0,78,967	0/0:36,0:36:86.97:0,87,1071	0/0:28,0:27:75.12:0,75,988	0/0:44,0:42:99:0,108,1291	0/0:44,0:44:99:0,109,1256	0/1:21,0:19:18.40:208,0,18	1/1:6,13:20:3.01:58,3,0	0/1:76,3:79:94.35:832,0,94	0/0:21,0:19:44.09:0,44,505	0/0:24,0:23:41.48:0,41,345	0/0:51,0:51:99:0,123,1583	0/0:22,0:22:50.83:0,51,653	0/0:39,0:38:91.65:0,92,1043	0/1:15,1:16:21.19:104,0,21	0/0:15,0:14:30.37:0,30,381
chr10	107131211	.	G	GT	200.30	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.255;DP=874;FS=0.000;HRun=1;HaplotypeScore=110.3617;InbreedingCoeff=0.9946;MQ=62.55;MQ0=3;MQRankSum=0.107;QD=20.03;ReadPosRankSum=-1.257;VQSLOD=3.2932;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,126,1625	1/1:5,4:10:24.03:294,24,0	0/0:34,0:26:61.73:0,62,713	0/0:31,0:28:64.58:0,65,807	0/0:16,0:16:39.11:0,39,490	0/0:20,0:20:54.18:0,54,701	0/0:45,0:45:99:0,123,1547	0/0:34,0:34:93.29:0,93,1192	0/0:35,0:35:99:0,102,1305	0/0:35,0:35:96.27:0,96,1186	0/0:10,0:10:24.08:0,24,312	0/0:35,0:35:75.71:0,76,972	0/0:34,0:34:99:0,99,1267	0/0:35,0:35:99:0,102,1309	0/0:21,0:21:63.20:0,63,818	0/0:19,0:19:54.16:0,54,687	0/0:49,0:49:99:0,135,1717	0/0:31,0:31:93.30:0,93,1207	0/0:20,0:19:48.14:0,48,598	0/0:21,0:21:60.20:0,60,779	0/0:119,0:119:99:0,316,4058	0/0:19,0:19:51.15:0,51,647	0/0:20,0:20:57.19:0,57,740	0/0:52,0:52:99:0,144,1825	0/0:23,0:23:57.16:0,57,724	0/0:35,0:35:99:0,99,1271	0/0:13,0:13:33.07:0,33,398	0/0:9,0:9:27.09:0,27,350
chr10	107131270	.	CGT	C	377.43	PASS	AB=0.912;AC=17;AF=0.304;AN=56;BaseQRankSum=8.948;DP=905;FS=3.574;HRun=0;HaplotypeScore=130.4347;InbreedingCoeff=-0.2258;MQ=54.79;MQ0=13;MQRankSum=1.871;QD=0.87;ReadPosRankSum=2.263;VQSLOD=2.2976;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:59,3:63:17.46:0,17,1615	0/1:12,0:11:4.56:5,0,49	0/0:23,0:6:9.03:0,9,128	0/0:36,0:9:21.01:0,21,266	0/1:19,3:23:4.45:4,0,530	0/1:23,0:23:18.71:19,0,516	0/1:39,8:47:48.46:48,0,1090	0/1:23,3:26:34.44:34,0,378	0/1:33,3:36:0.11:0,0,845	0/0:39,1:40:8.83:0,9,935	0/0:19,0:19:3.83:0,4,498	1/1:10,0:33:22.63:110,23,0	0/0:30,0:31:12.55:0,13,749	0/1:36,3:39:20.17:20,0,936	0/0:27,1:28:18.38:0,18,748	0/0:18,0:17:45.15:0,45,696	0/0:52,6:59:20.19:0,20,1785	0/1:28,4:33:95.97:96,0,716	0/1:18,1:16:5.21:5,0,385	0/1:22,1:24:1.45:1,0,581	0/0:85,7:93:20.74:0,21,1919	0/1:19,1:20:27.84:28,0,505	0/1:13,2:14:46.44:46,0,259	0/1:51,6:58:36.45:36,0,1469	0/1:12,2:15:58.20:58,0,254	0/0:43,2:45:10.58:0,11,1038	0/1:10,1:11:17.14:17,0,200	0/0:14,0:14:36.08:0,36,510
chr10	107133746	.	GGCTCGCTGC	G	1020.59	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.809;DP=582;FS=2.389;HRun=0;HaplotypeScore=158.0573;InbreedingCoeff=0.9913;MQ=91.50;MQ0=0;MQRankSum=-5.157;QD=72.90;ReadPosRankSum=0.074;VQSLOD=3.3177;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,4563	0/0:6,0:6:18.06:0,18,769	0/0:25,0:25:62.03:0,62,2644	0/0:22,0:22:54.16:0,54,2182	0/0:14,0:14:36.12:0,36,1746	0/0:26,0:26:78.27:0,78,3692	0/0:28,0:28:81.26:0,81,3740	0/0:20,0:20:60.20:0,60,2311	0/0:16,0:16:48.16:0,48,2213	0/0:12,0:12:36.12:0,36,1686	0/0:15,0:15:42.14:0,42,1881	1/1:1,13:14:35.98:1115,36,0	0/0:18,0:18:48.15:0,48,2205	0/0:24,0:24:72.23:0,72,3160	0/0:19,0:19:57.18:0,57,2671	0/0:17,0:17:51.16:0,51,2343	0/0:32,0:32:96.33:0,96,4526	0/0:24,0:24:72.23:0,72,3402	0/0:18,0:18:51.17:0,51,1990	0/0:24,0:24:63.19:0,63,2465	0/0:38,0:38:99:0,102,4620	0/0:16,0:16:42.14:0,42,1890	0/0:14,0:14:39.13:0,39,1770	0/0:26,0:26:75.26:0,75,3427	0/0:19,0:19:51.15:0,51,2253	0/0:27,0:27:78.27:0,78,3491	0/0:19,0:19:54.19:0,54,2644	0/0:11,0:11:33.11:0,33,1617
chr10	107135216	.	TCACACA	T	105.75	PASS	AB=1.000;AC=5;AF=0.109;AN=46;BaseQRankSum=1.782;DP=502;FS=4.315;HRun=0;HaplotypeScore=94.9841;InbreedingCoeff=0.3987;MQ=64.13;MQ0=7;MQRankSum=-2.570;QD=2.52;ReadPosRankSum=-0.865;VQSLOD=1.1006;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:27.07:0,27,461	0/0:5,0:5:6.02:0,6,122	./.	./.	0/0:10,0:9:3.01:0,3,90	0/0:15,0:15:18.06:0,18,412	0/0:22,0:22:12.04:0,12,274	./.	0/1:15,0:14:30.21:30,0,535	0/0:11,0:11:3.01:0,3,94	0/0:11,0:11:15.05:0,15,376	0/0:14,0:14:15.05:0,15,444	0/0:7,0:9:12.04:0,12,266	0/0:12,0:12:15.05:0,15,349	0/0:11,0:11:9.03:0,9,287	0/0:12,0:16:9.03:0,9,253	0/0:28,0:33:42.14:0,42,1042	0/0:19,0:21:30.20:0,30,629	1/1:15,0:15:1.21:18,1,0	./.	./.	0/0:10,0:12:12.04:0,12,295	0/0:11,0:11:12.04:0,12,269	0/0:40,0:40:45.11:0,45,1138	0/0:22,0:22:12.98:0,13,290	0/0:17,0:17:13.60:0,14,331	1/1:10,2:11:9.03:162,9,0	0/0:8,0:7:9.03:0,9,254
chr10	107136026	.	GAAA	G	753.43	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.120;DP=782;FS=1.664;HRun=3;HaplotypeScore=103.3186;InbreedingCoeff=0.8460;MQ=54.89;MQ0=41;MQRankSum=-4.516;QD=26.91;ReadPosRankSum=-1.554;VQSLOD=0.6338;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:53:99:0,157,3671	0/0:8,0:8:24.08:0,24,592	0/0:17,0:1:3.01:0,3,74	0/0:27,0:8:20.88:0,21,375	0/0:15,0:15:42.14:0,42,1035	0/0:19,0:19:57.18:0,57,1343	0/0:30,0:29:84.25:0,84,1951	0/0:37,0:23:69.20:0,69,1562	0/0:37,0:37:99:0,105,2438	0/0:23,0:23:69.23:0,69,1580	0/0:24,0:24:72.23:0,72,1720	1/1:5,23:28:72.15:848,72,0	0/0:30,0:30:90.31:0,90,2111	0/0:26,0:26:78.22:0,78,1821	0/0:23,0:23:69.21:0,69,1633	0/0:37,0:36:99:0,99,2197	0/0:50,0:49:99:0,135,3039	0/0:30,0:29:84.29:0,84,2029	0/0:34,0:17:51.17:0,51,1189	0/0:25,0:25:72.22:0,72,1702	0/0:30,0:30:81.28:0,81,1969	0/0:22,0:22:66.23:0,66,1576	0/0:19,0:19:54.19:0,54,1330	0/0:31,0:30:87.24:0,87,1962	0/0:12,0:12:36.11:0,36,811	0/0:33,0:32:96.28:0,96,2060	0/0:47,0:47:99:0,141,3428	0/0:13,0:12:33.09:0,33,721
chr10	107136030	.	GA	G	285.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.330;DP=779;FS=0.000;HRun=3;HaplotypeScore=77.6354;InbreedingCoeff=0.8462;MQ=54.44;MQ0=35;MQRankSum=-4.861;QD=11.40;ReadPosRankSum=-0.984;VQSLOD=1.1763;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:53:99:0,147,1997	0/0:8,0:8:24.07:0,24,327	0/0:17,0:1:2.98:0,3,21	0/0:27,0:8:20.54:0,21,225	0/0:15,0:15:42.12:0,42,569	0/0:18,0:18:51.16:0,51,715	0/0:30,0:29:81.20:0,81,1141	0/0:32,0:23:63.21:0,63,907	0/0:39,0:38:99:0,102,1441	0/0:23,0:23:63.18:0,63,881	0/0:24,0:24:66.22:0,66,950	1/1:2,23:25:59.57:380,60,0	0/0:31,0:31:87.27:0,87,1215	0/0:26,0:26:72.20:0,72,1013	0/0:24,0:24:63.21:0,63,907	0/0:36,0:35:89.87:0,90,1187	0/0:49,0:48:99:0,132,1696	0/0:32,0:31:84.28:0,84,1205	0/0:33,0:17:48.10:0,48,648	0/0:26,0:26:72.24:0,72,1029	0/0:31,0:31:78.26:0,78,1122	0/0:21,0:21:60.17:0,60,803	0/0:21,0:21:54.18:0,54,776	0/0:31,0:30:78.19:0,78,1062	0/0:12,0:12:33.11:0,33,474	0/0:31,0:30:89.96:0,90,1193	0/0:48,0:48:99:0,141,2028	0/0:12,0:11:30.10:0,30,432
chr10	107137668	.	C	CAAAGCTTGAAGCCTGAGTATCCGG	1884.78	PASS	AB=0.733;AC=25;AF=0.962;AN=26;BaseQRankSum=-2.563;DP=49;FS=9.874;HRun=0;HaplotypeScore=44.6671;InbreedingCoeff=-0.1800;MQ=149.25;MQ0=0;MQRankSum=-2.210;QD=45.97;ReadPosRankSum=0.088;VQSLOD=-0.1014;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	1/1:3,0:5:9.50:353,9,0	0/1:7,1:11:64.50:758,0,64	./.	./.	1/1:1,0:1:3.01:40,3,0	./.	1/1:3,0:3:5.99:50,6,0	./.	./.	./.	1/1:2,0:2:3.01:58,3,0	1/1:1,0:1:3.01:59,3,0	1/1:4,0:4:9.03:165,9,0	1/1:3,0:3:3:26,3,0	./.	1/1:2,0:2:2.99:24,3,0	./.	./.	1/1:3,0:3:5.98:70,6,0	./.	./.	./.	1/1:1,0:1:3.01:41,3,0	1/1:4,0:4:12.03:280,12,0	./.	1/1:1,0:1:3.01:44,3,0
chr10	107139761	.	T	TGA	384.91	PASS	AB=0.625;AC=3;AF=0.054;AN=56;BaseQRankSum=0.075;DP=759;FS=5.532;HRun=0;HaplotypeScore=89.7188;InbreedingCoeff=0.6409;MQ=62.55;MQ0=34;MQRankSum=-2.471;QD=11.66;ReadPosRankSum=0.990;VQSLOD=2.7091;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:78.43:0,78,892	1/1:3,0:13:15:132,15,0	0/0:130,0:29:31.93:0,32,294	0/0:159,0:50:33.84:0,34,270	0/0:21,0:22:48:0,48,524	0/0:18,0:18:43.70:0,44,469	0/0:12,0:12:18.05:0,18,214	0/0:18,0:18:33.09:0,33,384	0/0:17,0:17:36.11:0,36,429	0/0:18,0:18:27.08:0,27,322	0/0:11,0:11:18.05:0,18,204	0/1:8,11:19:8.68:355,0,9	0/0:22,0:22:50.94:0,51,584	0/0:11,0:11:30.09:0,30,357	0/0:20,0:20:48.15:0,48,572	0/0:18,0:18:44.86:0,45,501	0/0:16,0:18:23.90:0,24,259	0/0:10,0:10:30.09:0,30,357	0/0:16,0:17:22.13:0,22,223	0/0:15,0:15:24.05:0,24,272	0/0:34,0:34:75.18:0,75,858	0/0:25,0:25:54.14:0,54,622	0/0:11,0:11:15.04:0,15,179	0/0:22,0:22:60.18:0,60,713	0/0:13,0:14:20.90:0,21,229	0/0:26,0:27:65.85:0,66,728	0/0:15,0:15:36.11:0,36,427	0/0:5,0:5:9.03:0,9,105
chr10	107140347	.	C	CG	2034.97	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=0.311;DP=336;FS=21.977;HRun=6;HaplotypeScore=55.1100;InbreedingCoeff=0.8811;MQ=74.03;MQ0=5;MQRankSum=-4.518;QD=25.44;ReadPosRankSum=0.545;VQSLOD=1.8549;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:27.06:0,27,275	./.	0/0:34,0:14:14.96:0,15,184	0/0:25,0:10:17.52:0,18,150	0/0:4,0:4:12.03:0,12,122	0/0:8,0:8:24.04:0,24,237	0/0:15,0:15:36.06:0,36,360	1/1:10,10:20:39.08:473,39,0	0/0:9,0:9:24.05:0,24,245	0/0:11,0:11:22.41:0,22,213	0/0:4,0:4:9.02:0,9,91	1/1:3,12:14:33.11:415,33,0	0/0:4,0:4:9.02:0,9,92	0/0:6,0:6:6.01:0,6,61	0/0:9,0:9:15.03:0,15,153	0/0:11,0:10:24.03:0,24,237	0/0:27,0:26:63.14:0,63,646	0/0:12,0:12:33.07:0,33,335	1/1:2,10:10:33.09:400,33,0	1/1:3,8:11:27.08:331,27,0	1/1:3,11:14:33.11:415,33,0	0/0:2,0:2:6.01:0,6,61	0/0:4,0:4:3:0,3,31	0/0:13,0:13:33.05:0,33,329	0/0:15,0:15:36.07:0,36,360	0/0:15,0:15:30.07:0,30,306	1/1:1,7:8:15.05:184,15,0	0/0:10,0:9:15.03:0,15,153
chr10	107140590	.	T	TTTTG	3126.39	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-5.005;DP=425;FS=3.234;HRun=0;HaplotypeScore=75.7972;InbreedingCoeff=0.9428;MQ=77.86;MQ0=5;MQRankSum=-1.437;QD=42.25;ReadPosRankSum=-3.734;VQSLOD=2.7635;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.09:0,42,713	0/0:4,0:4:12.04:0,12,219	0/0:56,0:29:48.60:0,49,482	0/0:66,0:27:26.24:0,26,355	0/0:10,0:10:30.03:0,30,423	0/0:4,0:4:12.04:0,12,203	0/0:13,0:13:36.11:0,36,612	1/1:6,13:20:51.02:911,51,0	0/0:8,0:8:21.07:0,21,360	0/0:12,0:12:36.08:0,36,564	0/0:13,0:13:39.13:0,39,694	1/1:1,0:5:13.55:106,14,0	0/0:6,0:6:18.06:0,18,296	0/0:4,0:4:12:0,12,182	0/0:11,0:11:33.11:0,33,580	0/0:8,0:8:21.06:0,21,353	0/0:28,0:28:84.21:0,84,1370	0/0:26,0:26:78.15:0,78,1227	1/1:2,14:20:55.39:1126,55,0	1/1:0,8:11:23.98:476,24,0	1/1:1,7:8:15.05:408,15,0	0/0:4,0:4:12.04:0,12,217	0/0:3,0:3:9.03:0,9,164	0/0:16,0:16:45.13:0,45,721	0/0:14,0:14:39.13:0,39,710	0/0:18,0:18:51.15:0,51,845	1/1:1,4:7:12.04:282,12,0	0/0:5,0:5:15.05:0,15,273
chr10	107140729	.	T	TG	627.10	PASS	AB=0.845;AC=10;AF=0.179;AN=56;BaseQRankSum=5.518;DP=438;FS=8.912;HRun=2;HaplotypeScore=65.6477;InbreedingCoeff=0.7455;MQ=70.16;MQ0=19;MQRankSum=-2.980;QD=10.45;ReadPosRankSum=1.694;VQSLOD=1.0112;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:61.72:0,62,537	0/0:3,0:3:9:0,9,84	0/0:62,0:23:28.27:0,28,209	0/0:49,0:21:8.41:0,8,150	0/0:10,0:9:23.15:0,23,183	0/0:11,0:10:28.79:0,29,237	0/0:14,0:14:34.75:0,35,293	1/1:11,4:17:6.81:208,7,0	0/0:7,0:7:15:0,15,138	0/0:7,0:7:18.02:0,18,171	0/0:17,0:17:39.72:0,40,302	0/1:5,1:4:4.34:55,0,4	0/0:8,0:7:20.94:0,21,177	0/0:7,0:6:14.98:0,15,133	0/0:11,0:11:31.08:0,31,255	0/0:7,0:7:19.97:0,20,148	0/0:42,0:41:68.36:0,68,778	0/0:18,0:18:38.13:0,38,309	1/1:12,1:11:26.77:211,27,0	1/1:3,1:4:11.68:77,12,0	1/1:8,1:7:14.81:102,15,0	0/0:7,0:7:16.99:0,17,131	0/0:9,0:9:22.66:0,23,167	0/0:35,0:35:81.49:0,81,686	0/0:10,0:10:24.46:0,24,206	0/0:14,0:14:26.05:0,26,294	0/1:7,2:9:2.21:132,0,2	0/0:2,0:2:4.07:0,4,12
chr10	107140876	.	TTTGTTGTTGTTG	T	1968.72	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=7.846;DP=434;FS=0.000;HRun=0;HaplotypeScore=136.8195;InbreedingCoeff=0.7118;MQ=67.87;MQ0=10;MQRankSum=-3.496;QD=11.51;ReadPosRankSum=-1.187;VQSLOD=1.9931;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:48.16:0,48,2312	0/0:6,0:6:15.05:0,15,715	0/1:44,0:19:34.47:34,0,495	0/1:56,0:27:12.91:13,0,340	0/0:5,0:5:15.05:0,15,745	0/0:11,0:11:27.09:0,27,1466	0/0:6,0:15:36.11:0,36,1398	1/1:9,9:14:27.03:495,27,0	0/0:10,0:10:21.07:0,21,1203	0/0:23,0:22:57.20:0,57,2469	0/0:15,0:15:42.14:0,42,2271	0/0:2,0:8:21.07:0,21,548	0/0:7,0:7:18.06:0,18,817	0/0:7,0:6:18.06:0,18,857	0/0:8,0:8:21.07:0,21,1131	0/0:9,0:9:21.07:0,21,1117	0/0:32,0:33:79.98:0,80,3894	0/0:24,0:24:57.20:0,57,2939	1/1:9,10:17:30.03:843,30,0	1/1:1,6:6:12.01:337,12,0	1/1:5,9:14:6.02:204,6,0	0/0:6,0:6:12.04:0,12,664	0/0:6,0:6:18.06:0,18,904	0/0:23,0:23:60.19:0,60,2834	0/0:10,0:10:24.08:0,24,1303	0/0:12,0:12:30.10:0,30,1443	1/1:4,7:11:6.02:211,6,0	0/0:5,0:5:12.04:0,12,701
chr10	107141116	.	T	TG	414.97	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=8.410;DP=486;FS=6.678;HRun=1;HaplotypeScore=75.0718;InbreedingCoeff=0.5870;MQ=77.60;MQ0=6;MQRankSum=0.654;QD=4.03;ReadPosRankSum=0.182;VQSLOD=0.0926;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:71.61:0,72,823	0/0:5,0:5:15.04:0,15,181	0/0:35,0:19:25.82:0,26,326	0/0:47,0:31:22.24:0,22,263	0/0:10,0:10:26.99:0,27,297	0/0:4,0:4:12.01:0,12,125	0/0:21,1:22:18.75:0,19,611	1/1:24,0:22:19.52:131,20,0	0/0:12,0:12:36.06:0,36,441	0/0:18,0:18:51.03:0,51,560	0/0:15,0:15:38.45:0,38,494	1/1:3,7:9:21.07:306,21,0	0/0:6,0:6:18.04:0,18,217	0/0:9,0:9:27.07:0,27,334	0/0:16,0:16:41.84:0,42,539	0/0:11,0:11:20.52:0,21,324	0/0:33,0:33:89.33:0,89,1134	0/0:35,0:35:93.13:0,93,1190	0/1:17,0:16:17.82:18,0,22	0/1:15,0:15:30.56:50,0,31	0/1:13,0:13:0.73:4,0,1	0/0:5,0:5:15.05:0,15,193	0/0:16,0:16:42.09:0,42,496	0/0:17,0:17:45.13:0,45,562	0/0:13,0:13:32.54:0,33,449	0/0:16,0:16:45.11:0,45,539	1/1:23,0:23:0.67:49,1,0	0/0:6,0:6:18.06:0,18,231
chr10	107141159	.	G	GTTTTGGT	3439.67	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-2.824;DP=603;FS=21.304;HRun=0;HaplotypeScore=141.1424;InbreedingCoeff=0.9411;MQ=71.02;MQ0=9;MQRankSum=-6.135;QD=34.06;ReadPosRankSum=-4.254;VQSLOD=1.3822;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:52.74:0,53,1233	0/0:8,0:8:21:0,21,435	0/0:60,0:29:13.96:0,14,258	0/0:75,0:34:28.79:0,29,387	0/0:16,0:16:42.12:0,42,843	0/0:5,0:5:12.02:0,12,211	0/0:22,0:22:30.10:0,30,662	1/1:19,0:21:27.04:531,27,0	0/0:15,0:15:31.11:0,31,709	0/0:16,0:16:36.12:0,36,725	0/0:22,0:22:60.20:0,60,1259	0/0:13,0:13:27.09:0,27,581	0/0:11,0:11:30.10:0,30,695	0/0:13,0:13:27.09:0,27,590	0/0:18,0:18:48.16:0,48,1042	0/0:14,0:14:33.10:0,33,719	0/0:33,0:34:23.15:0,23,1496	0/0:33,0:33:90.22:0,90,1861	1/1:8,12:21:39.11:894,39,0	1/1:5,10:15:24.04:677,24,0	1/1:4,7:12:3.01:110,3,0	0/0:13,0:13:30.10:0,30,695	0/0:15,0:15:30.10:0,30,635	0/0:24,0:24:48.14:0,48,994	0/0:17,0:17:51.13:0,51,1026	0/0:22,0:22:48.16:0,48,1065	1/1:8,19:29:34.36:1226,34,0	0/0:7,0:7:18.06:0,18,413
chr10	107144126	.	GCTCTAACAAGGCCACACCTT	G	3752.75	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.089;DP=737;FS=5.087;HRun=0;HaplotypeScore=364.9676;InbreedingCoeff=0.9896;MQ=65.98;MQ0=1;MQRankSum=-1.171;QD=29.78;ReadPosRankSum=-3.267;VQSLOD=0.7001;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,132,8496	0/0:8,0:8:15.05:0,15,902	0/0:35,0:33:48.16:0,48,1658	0/0:26,0:22:54.19:0,54,1795	0/0:20,0:20:51.18:0,51,3190	0/0:19,0:19:42.14:0,42,2107	0/0:28,0:28:72.25:0,72,3781	1/1:9,15:24:45.08:742,45,0	0/0:37,0:37:87.30:0,87,5611	0/0:28,0:28:72.25:0,72,4311	0/0:12,0:12:24.08:0,24,1372	0/0:21,0:21:51.16:0,51,3084	0/0:21,0:21:54.18:0,54,3119	0/0:26,0:26:60.21:0,60,3660	0/0:27,0:27:60.16:0,60,3058	0/0:30,0:30:81.28:0,81,5274	0/0:39,0:39:99:0,102,5807	0/0:31,0:31:78.27:0,78,4438	1/1:12,8:20:24.08:573,24,0	1/1:1,13:14:18.06:466,18,0	1/1:45,0:44:54.19:1443,54,0	0/0:23,0:23:48.16:0,48,2458	0/0:21,0:21:51.17:0,51,2800	0/0:29,0:29:72.08:0,72,3722	0/0:20,0:20:54.15:0,54,2435	0/0:30,0:30:78.26:0,78,4445	1/1:6,17:23:14.88:529,15,0	0/0:23,0:23:69.24:0,69,3951
chr10	107144920	.	CT	C	2443.50	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.788;DP=414;FS=6.762;HRun=7;HaplotypeScore=37.3696;InbreedingCoeff=0.9640;MQ=70.24;MQ0=0;MQRankSum=-0.753;QD=23.27;ReadPosRankSum=-1.900;VQSLOD=2.2030;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.27:0,87,1081	0/0:11,0:11:30.10:0,30,377	0/0:12,0:9:21.02:0,21,239	0/0:9,0:6:9.03:0,9,113	0/0:14,0:14:39.11:0,39,477	0/0:22,0:22:57.18:0,57,716	0/0:13,0:13:36.12:0,36,452	1/1:3,22:25:66.15:673,66,0	0/0:7,0:7:18.05:0,18,215	0/0:18,0:18:48.15:0,48,599	0/0:7,0:7:21.07:0,21,264	1/1:1,10:11:27.06:275,27,0	0/0:12,0:12:30.08:0,30,354	0/0:6,0:6:15.03:0,15,174	0/0:5,0:5:15.05:0,15,189	0/0:11,0:11:33.09:0,33,400	0/0:40,0:39:99:0,108,1357	0/0:16,0:16:42.13:0,42,526	1/1:4,26:30:78.18:796,78,0	1/1:0,9:9:24.05:244,24,0	1/1:4,9:13:21.05:214,21,0	0/0:4,0:4:12.04:0,12,151	0/0:4,0:4:12.04:0,12,151	0/0:7,0:7:21.07:0,21,264	0/0:14,0:14:36.12:0,36,453	0/0:30,0:30:78.24:0,78,968	1/1:3,14:17:42.09:428,42,0	0/0:15,0:15:36.12:0,36,453
chr10	107145053	.	G	GT	74.72	PASS	AB=0.793;AC=2;AF=0.036;AN=56;BaseQRankSum=3.727;DP=514;FS=0.000;HRun=0;HaplotypeScore=47.3978;InbreedingCoeff=-0.0374;MQ=57.05;MQ0=5;MQRankSum=-3.786;QD=1.92;ReadPosRankSum=-2.265;VQSLOD=1.4235;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1677	0/0:6,0:6:18.06:0,18,252	0/1:11,6:10:99:110,0,247	0/1:18,4:15:53.50:53,0,426	0/0:11,0:11:32.99:0,33,417	0/0:17,0:17:51.17:0,51,713	0/0:27,0:27:81.22:0,81,1074	0/0:31,0:30:87.28:0,87,1194	0/0:16,0:16:45.15:0,45,629	0/0:20,0:20:51.17:0,51,712	0/0:9,0:9:27.07:0,27,359	0/0:11,0:11:33.08:0,33,426	0/0:17,0:17:45.13:0,45,611	0/0:11,0:11:27.09:0,27,378	0/0:12,0:12:36.11:0,36,487	0/0:17,0:17:51.17:0,51,710	0/0:27,0:27:81.27:0,81,1132	0/0:18,0:18:48.14:0,48,647	0/0:17,0:16:45.13:0,45,610	0/0:18,0:18:54.15:0,54,717	0/0:30,0:30:90.22:0,90,1197	0/0:11,0:11:33.11:0,33,461	0/0:15,0:15:45.06:0,45,567	0/0:23,0:23:66.22:0,66,922	0/0:15,0:15:45.15:0,45,625	0/0:16,0:16:42.12:0,42,569	0/0:16,0:16:48.15:0,48,654	0/0:24,0:24:66.22:0,66,923
chr10	107147074	.	G	GA	3723.73	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-12.601;DP=484;FS=8.686;HRun=6;HaplotypeScore=46.8058;InbreedingCoeff=0.9813;MQ=73.74;MQ0=0;MQRankSum=0.856;QD=31.83;ReadPosRankSum=-1.742;VQSLOD=3.1491;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.13:0,87,874	0/0:12,0:12:30.01:0,30,286	0/0:13,0:11:17.61:0,18,182	0/0:8,0:8:14.95:0,15,152	0/0:20,0:20:51.08:0,51,503	0/0:13,0:13:39.09:0,39,398	0/0:15,0:15:36.08:0,36,367	1/1:9,33:42:99:1218,99,0	0/0:12,0:12:30.05:0,30,298	0/0:19,0:19:48.09:0,48,483	0/0:15,0:15:33.06:0,33,330	0/0:9,0:9:24.05:0,24,245	0/0:17,0:17:51.12:0,51,520	0/0:11,0:11:27.03:0,27,261	0/0:15,0:15:45.10:0,45,459	0/0:5,0:5:12.02:0,12,122	0/0:30,0:30:84.11:0,84,831	0/0:28,0:28:84.16:0,84,848	1/1:1,17:18:51.15:619,51,0	1/1:1,16:17:48.15:604,48,0	1/1:4,12:16:33.11:415,33,0	0/0:8,0:8:21.05:0,21,213	0/0:13,0:13:33.03:0,33,326	0/0:7,0:7:15.02:0,15,147	0/0:23,0:23:63.14:0,63,642	0/0:26,0:26:78.18:0,78,796	1/1:1,23:24:69.22:868,69,0	0/0:17,0:17:51.12:0,51,520
chr10	107147100	.	GTA	G	231.35	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.493;DP=515;FS=1.212;HRun=0;HaplotypeScore=69.7242;InbreedingCoeff=0.8047;MQ=62.03;MQ0=2;MQRankSum=-2.576;QD=9.25;ReadPosRankSum=-0.100;VQSLOD=3.1218;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:86.95:0,87,1310	1/1:5,10:15:26.81:320,27,0	1/1:10,0:2:2.94:18,3,0	0/0:10,0:5:2.85:0,3,18	0/0:26,0:26:66.23:0,66,1120	0/0:16,0:16:45.15:0,45,766	0/0:15,0:15:36.11:0,36,582	0/0:40,0:40:99:0,111,1762	0/0:11,0:11:30.10:0,30,509	0/0:24,0:24:57.18:0,57,918	0/0:18,0:18:51.16:0,51,844	0/0:8,0:8:18.06:0,18,309	0/0:16,0:16:42.14:0,42,709	0/0:9,0:9:21.07:0,21,343	0/0:15,0:15:42.14:0,42,709	0/0:8,0:8:24.08:0,24,407	0/0:29,0:29:84.23:0,84,1370	0/0:25,0:25:57.03:0,57,829	0/0:17,0:16:39.13:0,39,643	0/0:29,0:29:81.25:0,81,1289	0/0:10,0:10:30.10:0,30,505	0/0:10,0:10:27.09:0,27,459	0/0:12,0:12:30.09:0,30,483	0/0:5,0:5:15.04:0,15,231	0/0:31,0:31:90.29:0,90,1491	0/0:26,0:26:63.20:0,63,1051	0/0:28,0:28:78.23:0,78,1269	0/0:20,0:20:60.21:0,60,1009
chr10	107147119	.	TAC	T	217.33	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.556;DP=544;FS=3.230;HRun=0;HaplotypeScore=73.4873;InbreedingCoeff=0.9413;MQ=63.30;MQ0=3;MQRankSum=-2.547;QD=13.58;ReadPosRankSum=0.768;VQSLOD=3.3887;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:75.22:0,75,1236	1/1:1,15:16:23.84:311,24,0	0/0:13,0:5:10.83:0,11,96	0/0:15,0:9:16.95:0,17,150	0/0:24,0:24:66.21:0,66,1093	0/0:18,0:18:54.17:0,54,891	0/0:13,0:13:39.10:0,39,614	0/0:43,0:43:99:0,102,1552	0/0:11,0:11:33.11:0,33,565	0/0:24,0:24:72.23:0,72,1209	0/0:18,0:18:54.17:0,54,895	0/0:12,0:11:21.07:0,21,358	0/0:17,0:17:45.12:0,45,738	0/0:8,0:8:24.08:0,24,415	0/0:19,0:19:57.15:0,57,914	0/0:10,0:10:27.08:0,27,436	0/0:28,0:28:72.20:0,72,1187	0/0:22,0:22:60.13:0,60,930	0/0:18,0:16:48.07:0,48,707	0/0:29,0:29:87.22:0,87,1348	0/0:13,0:13:33.11:0,33,560	0/0:17,0:17:51.14:0,51,818	0/0:11,0:11:33.11:0,33,571	0/0:8,0:8:24.08:0,24,408	0/0:32,0:32:81.26:0,81,1367	0/0:22,0:22:57.16:0,57,908	0/0:27,0:27:81.26:0,81,1355	0/0:24,0:24:69.19:0,69,1122
chr10	107147184	.	T	TAC	607.70	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.898;DP=649;FS=1.956;HRun=0;HaplotypeScore=80.0261;InbreedingCoeff=0.8910;MQ=61.43;MQ0=4;MQRankSum=0.500;QD=30.39;ReadPosRankSum=-0.318;VQSLOD=5.2101;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,105,1244	0/0:13,0:13:18.05:0,18,229	0/0:18,0:16:13.34:0,13,210	0/0:24,0:15:7.09:0,7,149	0/0:30,0:30:60.18:0,60,749	0/0:19,0:19:48.14:0,48,597	0/0:16,0:16:42.12:0,42,520	0/0:38,0:38:68.25:0,68,1039	0/0:22,0:22:54.16:0,54,673	0/0:31,0:31:63.16:0,63,742	0/0:10,0:10:27.06:0,27,317	1/1:0,20:19:42.14:702,42,0	0/0:14,0:14:39.10:0,39,469	0/0:18,0:18:42.11:0,42,507	0/0:25,0:25:66.18:0,66,812	0/0:10,0:10:21.05:0,21,254	0/0:30,0:30:69.20:0,69,863	0/0:20,0:20:56.52:0,57,659	0/0:21,0:20:48.14:0,48,588	0/0:39,0:39:99:0,105,1171	0/0:39,0:39:99:0,111,1367	0/0:20,0:20:54.10:0,54,628	0/0:16,0:16:36.05:0,36,401	0/0:20,0:20:57.15:0,57,696	0/0:30,0:30:75.15:0,75,860	0/0:26,0:26:72.21:0,72,890	0/0:21,0:21:48.07:0,48,539	0/0:20,0:20:54.11:0,54,630
chr10	107149141	.	TGC	T	2135.53	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=1.128;DP=586;FS=14.439;HRun=0;HaplotypeScore=79.3475;InbreedingCoeff=0.9362;MQ=72.74;MQ0=15;MQRankSum=-2.848;QD=13.87;ReadPosRankSum=0.961;VQSLOD=2.5564;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:57.80:0,58,578	1/1:7,0:7:20.98:175,21,0	0/0:17,0:13:28.95:0,29,220	0/0:25,0:18:27.23:0,27,311	0/0:17,0:17:41.41:0,41,296	0/0:22,0:22:37.02:0,37,282	0/0:30,0:30:62.86:0,63,682	1/1:13,5:17:38.96:344,39,0	0/0:20,0:20:49.25:0,49,400	0/0:24,0:23:56.72:0,57,524	0/0:13,0:13:29.72:0,30,258	1/1:26,0:26:47.98:409,48,0	0/0:20,0:19:20.63:0,21,322	0/0:25,0:25:55.83:0,56,674	0/0:23,0:23:49.22:0,49,600	0/0:13,0:12:29.68:0,30,245	0/0:35,0:35:87.56:0,88,918	0/0:18,0:18:41.75:0,42,337	1/1:25,0:22:41.37:368,41,0	1/1:15,0:14:29.95:248,30,0	1/1:50,0:49:15.27:610,15,0	0/0:11,0:11:23.48:0,23,210	0/0:11,0:11:26.95:0,27,246	0/0:34,0:34:47.25:0,47,785	0/0:11,0:11:26.81:0,27,227	0/0:24,0:24:67.21:0,67,584	0/1:13,0:13:1.30:172,0,1	0/0:9,0:7:17.85:0,18,132
chr10	107149787	.	GA	G	3000.46	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.360;DP=516;FS=2.554;HRun=4;HaplotypeScore=65.5155;InbreedingCoeff=0.9838;MQ=93.22;MQ0=0;MQRankSum=-3.502;QD=30.31;ReadPosRankSum=-1.058;VQSLOD=3.3876;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:63.19:0,63,860	1/1:0,4:4:9.03:107,9,0	0/0:20,0:19:48.62:0,49,638	0/0:25,0:26:59.49:0,59,746	0/0:10,0:10:24.07:0,24,318	0/0:11,0:11:33.11:0,33,462	0/0:34,0:34:99:0,99,1362	1/1:1,17:18:48.14:565,48,0	0/0:20,0:20:60.19:0,60,821	0/0:16,0:16:45.15:0,45,626	0/0:9,0:9:21.03:0,21,257	0/0:24,0:24:72.22:0,72,975	0/0:18,0:18:48.13:0,48,630	0/0:15,0:15:45.10:0,45,592	0/0:20,0:20:60.18:0,60,809	0/0:16,0:16:48.16:0,48,671	0/0:45,0:44:99:0,129,1766	0/0:21,0:21:60.18:0,60,817	1/1:2,17:19:51.16:611,51,0	1/1:1,7:8:18.05:214,18,0	1/1:4,23:27:72.22:862,72,0	0/0:13,0:13:39.13:0,39,544	0/0:10,0:10:24.08:0,24,336	0/0:28,0:28:84.27:0,84,1159	0/0:13,0:13:30.10:0,30,419	0/0:12,0:12:33.10:0,33,432	1/1:0,23:23:69.21:826,69,0	0/0:8,0:8:21.07:0,21,294
chr10	107150236	.	TTGTGTG	T	4606.61	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.928;DP=652;FS=3.401;HRun=0;HaplotypeScore=147.2663;InbreedingCoeff=0.9985;MQ=72.29;MQ0=0;MQRankSum=-11.597;QD=45.16;ReadPosRankSum=-2.727;VQSLOD=3.8675;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,4005	1/1:2,10:12:26.99:594,27,0	0/0:25,0:21:48.15:0,48,1334	0/0:32,0:30:79.46:0,79,2310	0/0:10,0:10:27.09:0,27,931	0/0:19,0:19:54.17:0,54,1764	0/0:41,0:41:99:0,105,3321	1/1:7,13:20:39.13:825,39,0	0/0:25,0:25:75.26:0,75,2514	0/0:23,0:23:66.23:0,66,2235	0/0:18,0:18:45.15:0,45,1534	0/0:20,0:21:60.21:0,60,1949	0/0:18,0:19:57.16:0,57,1790	0/0:24,0:24:66.23:0,66,2264	0/0:32,0:32:81.28:0,81,2770	0/0:28,0:28:81.28:0,81,2695	0/0:33,0:33:87.30:0,87,2880	0/0:22,0:22:54.19:0,54,1861	1/1:4,20:24:60.16:1295,60,0	1/1:3,8:11:24.05:418,24,0	1/1:5,11:16:23.75:433,24,0	0/0:18,0:19:48.16:0,48,1517	0/0:19,0:19:57.20:0,57,1947	0/0:39,0:40:99:0,102,3409	0/0:16,0:16:39.12:0,39,1266	0/0:33,0:34:90.30:0,90,2750	1/1:1,18:19:47.95:1041,48,0	0/0:9,0:9:27.09:0,27,931
chr10	107150438	.	TG	T	785.59	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.078;DP=619;FS=0.000;HRun=1;HaplotypeScore=59.4337;InbreedingCoeff=0.9946;MQ=74.26;MQ0=0;MQRankSum=-1.120;QD=34.16;ReadPosRankSum=1.203;VQSLOD=3.2944;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,2083	0/0:8,0:8:24.08:0,24,384	0/0:20,0:18:54.18:0,54,837	0/0:15,0:16:44.70:0,45,637	0/0:9,0:9:27.09:0,27,432	0/0:15,0:15:45.15:0,45,712	0/0:31,0:31:90.31:0,90,1439	0/0:44,0:44:99:0,129,2021	0/0:22,0:22:63.21:0,63,1005	0/0:22,0:22:66.22:0,66,1012	0/0:9,0:9:24.08:0,24,384	1/1:0,23:23:63.21:880,63,0	0/0:19,0:19:57.19:0,57,906	0/0:29,0:29:87.28:0,87,1365	0/0:17,0:17:51.15:0,51,769	0/0:15,0:15:45.15:0,45,720	0/0:38,0:38:99:0,111,1749	0/0:20,0:20:60.17:0,60,927	0/0:14,0:14:42.14:0,42,671	0/0:12,0:12:33.11:0,33,527	0/0:50,0:50:99:0,144,2247	0/0:16,0:16:45.13:0,45,673	0/0:18,0:18:48.16:0,48,766	0/0:34,0:34:99:0,102,1566	0/0:22,0:22:57.19:0,57,911	0/0:21,0:21:63.21:0,63,1008	0/0:16,0:16:48.16:0,48,762	0/0:15,0:15:45.15:0,45,719
chr10	107150899	.	AGGGGAGGGGATG	A	439.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.125;DP=680;FS=1.636;HRun=0;HaplotypeScore=239.6353;InbreedingCoeff=0.9828;MQ=83.32;MQ0=0;MQRankSum=-2.801;QD=54.94;ReadPosRankSum=0.500;VQSLOD=3.4544;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,129,7157	1/1:0,7:8:15.05:528,15,0	0/0:22,0:22:56.93:0,57,2627	0/0:21,0:22:46.04:0,46,2559	0/0:12,0:12:36.12:0,36,1880	0/0:21,0:21:60.21:0,60,3705	0/0:24,0:24:72.24:0,72,4277	0/0:25,0:25:72.25:0,72,4074	0/0:21,0:21:60.21:0,60,3565	0/0:19,0:19:54.18:0,54,3122	0/0:20,0:20:57.18:0,57,2997	0/0:25,0:25:72.25:0,72,4298	0/0:21,0:21:63.22:0,63,3523	0/0:34,0:34:99:0,99,5458	0/0:30,0:30:87.30:0,87,5222	0/0:38,0:38:99:0,111,6529	0/0:33,0:33:96.33:0,96,5868	0/0:28,0:28:81.28:0,81,4703	0/0:19,0:19:57.20:0,57,3404	0/0:16,0:16:48.16:0,48,2886	0/0:47,0:47:99:0,133,7664	0/0:17,0:17:45.15:0,45,2444	0/0:13,0:13:39.13:0,39,2252	0/0:26,0:25:72.13:0,72,4446	0/0:29,0:29:81.28:0,81,4666	0/0:26,0:26:78.26:0,78,4249	0/0:28,0:27:84.29:0,84,4844	0/0:10,0:9:27.09:0,27,1673
chr10	107151172	.	A	ATGTG	41.51	PASS	AB=0.984;AC=11;AF=0.212;AN=52;BaseQRankSum=1.303;DP=734;FS=0.000;HRun=0;HaplotypeScore=148.9603;InbreedingCoeff=0.3837;MQ=65.98;MQ0=9;MQRankSum=-2.385;QD=0.22;ReadPosRankSum=-1.958;VQSLOD=2.4204;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:41:3.88:0,4,47	0/0:7,0:9:3:0,3,28	./.	./.	0/0:28,0:28:9.02:0,9,119	0/0:23,0:20:9.01:0,9,137	0/0:27,0:27:15.03:0,15,207	0/0:27,0:26:0:0,0,0	0/0:41,0:39:18.04:0,18,237	0/0:20,0:18:6.48:0,6,73	0/1:11,0:11:0.01:0,0,0	0/0:22,0:29:3.24:0,3,51	0/1:19,0:20:3.41:3,0,81	0/0:23,0:22:3:0,3,46	1/1:16,12:30:3.01:68,3,0	0/0:27,0:27:20.94:0,21,309	0/0:33,0:31:29.99:0,30,389	0/0:20,0:19:3.67:0,4,256	1/1:20,0:20:0.47:1,0,0	0/1:22,0:27:0:0,0,0	1/1:46,0:47:1.39:26,1,0	0/0:24,0:22:9.03:0,9,137	0/0:19,0:21:8.29:0,8,64	0/0:43,0:42:36.10:0,36,516	0/0:16,0:19:9.01:0,9,84	1/1:31,0:29:5.20:48,5,0	0/0:9,0:8:3:0,3,28	0/0:13,0:13:6.81:0,7,98
chr10	107151486	.	ATG	A	5337.16	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=14.276;DP=1162;FS=2.439;HRun=0;HaplotypeScore=126.1467;InbreedingCoeff=0.9999;MQ=51.88;MQ0=95;MQRankSum=0.479;QD=23.21;ReadPosRankSum=-1.282;VQSLOD=5.2194;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:60:99:0,132,2272	0/0:17,0:17:45.15:0,45,772	./.	./.	0/0:29,0:27:66.23:0,66,1143	0/0:16,0:13:33.11:0,33,572	0/0:41,0:27:45.15:0,45,749	1/1:17,29:33:69.20:889,69,0	0/0:66,0:64:99:0,162,2696	0/0:50,0:40:99:0,114,1947	0/0:23,0:22:54.17:0,54,903	0/0:45,0:41:99:0,117,2013	0/0:39,0:39:99:0,114,1970	0/0:44,0:43:99:0,126,2160	0/0:59,0:57:99:0,150,2553	0/0:54,0:54:99:0,124,2390	0/0:43,0:38:78.27:0,78,1340	0/0:24,0:23:36.90:0,37,663	1/1:3,16:15:42.10:540,42,0	1/1:3,32:34:93.31:1235,93,0	1/1:14,84:89:99:1874,141,0	0/0:50,0:47:99:0,117,1980	0/0:29,0:27:78.25:0,78,1311	0/0:53,0:51:99:0,117,1988	0/0:30,0:27:72.21:0,72,1192	0/0:51,0:47:99:0,126,2155	1/1:6,26:28:60.20:799,60,0	0/0:21,0:21:57.20:0,57,980
chr10	107152457	.	T	TA	151.60	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=-2.844;DP=502;FS=0.000;HRun=11;HaplotypeScore=51.3538;InbreedingCoeff=0.5161;MQ=66.40;MQ0=4;MQRankSum=0.302;QD=3.99;ReadPosRankSum=-0.499;VQSLOD=-0.3462;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:40:66.47:0,66,645	0/0:3,0:3:6.66:0,7,20	0/1:13,0:4:9.02:9,0,15	0/1:14,0:8:4.48:4,0,8	0/0:35,0:35:74.59:0,75,569	0/0:18,0:19:49.85:0,50,377	0/0:17,0:17:14.92:0,15,248	0/0:27,1:28:32.33:0,32,430	0/0:16,0:16:32.85:0,33,255	0/0:18,0:18:32.75:0,33,248	0/0:21,0:21:56.04:0,56,416	1/1:0,11:11:24.05:242,24,0	0/0:20,0:20:50.78:0,51,391	0/0:20,0:20:53.79:0,54,418	0/0:10,0:10:23.89:0,24,186	0/0:11,0:10:26.15:0,26,204	0/0:26,0:29:70.65:0,71,527	0/0:31,0:31:71.67:0,72,556	0/0:19,1:21:21.53:0,22,318	0/0:21,0:21:47.73:0,48,359	0/0:7,0:7:14.86:0,15,108	0/0:11,0:11:26.85:0,27,208	0/0:8,0:9:25.95:0,26,192	0/0:13,0:13:29.85:0,30,229	0/0:17,1:18:11.52:0,12,269	0/0:16,0:16:38.83:0,39,300	0/0:12,0:13:22.79:0,23,168	0/0:15,0:15:35.82:0,36,275
chr10	107153015	.	A	AACAC	218.87	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.344;DP=842;FS=1.725;HRun=0;HaplotypeScore=135.0855;InbreedingCoeff=0.9580;MQ=67.65;MQ0=3;MQRankSum=-0.628;QD=27.36;ReadPosRankSum=1.843;VQSLOD=3.8414;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,144,2465	1/1:4,4:8:12.04:305,12,0	0/0:40,0:23:44.80:0,45,680	0/0:39,0:29:60.07:0,60,952	0/0:23,0:23:54.15:0,54,849	0/0:23,0:23:66.21:0,66,1121	0/0:37,0:37:90.29:0,90,1537	0/0:32,0:32:75.25:0,75,1272	0/0:33,0:33:84.27:0,84,1433	0/0:34,0:34:90.77:0,91,1533	0/0:22,0:22:54.17:0,54,913	0/0:33,0:33:87.30:0,87,1504	0/0:36,0:36:84.25:0,84,1395	0/0:43,0:43:99:0,123,2134	0/0:29,0:29:81.28:0,81,1404	0/0:12,0:12:27.09:0,27,470	0/0:45,0:45:99:0,120,2087	0/0:21,0:21:57.20:0,57,991	0/0:23,0:23:51.08:0,51,765	0/0:17,0:17:26.20:0,26,586	0/0:94,0:94:99:0,262,4469	0/0:22,0:22:54.16:0,54,887	0/0:14,0:14:30.10:0,30,522	0/0:25,0:25:69.22:0,69,1172	0/0:26,0:26:72.25:0,72,1235	0/0:27,0:27:72.24:0,72,1226	0/0:18,0:18:48.15:0,48,808	0/0:6,0:6:18.06:0,18,313
chr10	107154196	.	AAC	A	260.06	PASS	AB=0.905;AC=18;AF=0.375;AN=48;BaseQRankSum=6.875;DP=525;FS=3.227;HRun=0;HaplotypeScore=93.0057;InbreedingCoeff=0.3418;MQ=70.42;MQ0=11;MQRankSum=-4.581;QD=1.33;ReadPosRankSum=1.140;VQSLOD=1.7646;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:18.06:0,18,264	1/1:2,0:4:5.68:28,6,0	./.	./.	0/0:19,0:18:9.03:0,9,133	0/0:9,0:9:15.02:0,15,179	0/0:21,0:20:9.03:0,9,119	./.	0/0:18,0:18:18.53:0,19,264	0/0:25,0:25:27.09:0,27,387	0/1:15,0:17:57.42:57,0,218	1/1:15,0:16:22.44:108,22,0	1/1:6,0:6:5.64:28,6,0	0/0:13,0:13:4.60:0,5,65	0/0:18,0:18:18.05:0,18,242	0/1:10,3:13:26.83:27,0,38	0/1:26,0:25:7.81:8,0,266	0/0:12,0:12:27.01:0,27,333	1/1:11,0:12:2.84:14,3,0	1/1:13,0:12:8.52:42,9,0	./.	0/1:17,7:24:5.69:6,0,296	0/0:13,4:17:12.02:0,12,152	0/1:37,1:39:13.48:13,0,341	0/1:12,0:12:7.23:7,0,146	0/0:18,0:18:21.05:0,21,262	1/1:11,0:12:17.04:84,17,0	0/0:20,0:20:3.04:0,3,384
chr10	107154233	.	ACACACACACT	A	1431.80	PASS	AB=0.975;AC=8;AF=0.143;AN=56;BaseQRankSum=7.160;DP=637;FS=15.570;HRun=0;HaplotypeScore=165.1524;InbreedingCoeff=0.2488;MQ=48.65;MQ0=52;MQRankSum=-5.986;QD=14.18;ReadPosRankSum=1.082;VQSLOD=1.9621;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:83.77:0,84,1916	0/1:5,0:5:20.29:47,0,20	0/0:53,0:14:41.66:0,42,356	0/0:61,0:8:20.93:0,21,188	0/0:16,0:15:30.04:0,30,787	0/0:19,0:19:45.01:0,45,1216	0/0:27,0:26:63.39:0,63,1327	0/1:18,0:16:11.31:11,0,111	0/0:21,0:21:57.82:0,58,1683	0/0:28,0:26:74.76:0,75,2276	0/0:19,0:19:42.11:0,42,1402	1/1:3,7:10:20.07:764,20,0	0/0:17,0:17:47.74:0,48,766	0/0:14,0:14:30.08:0,30,923	0/0:19,0:19:36.07:0,36,1117	0/0:12,0:12:23.06:0,23,548	0/0:23,0:22:51.10:0,51,1647	0/0:20,0:20:58.64:0,59,1933	0/1:14,0:13:29.15:29,0,152	0/1:9,1:9:0.02:245,0,0	0/1:28,0:25:27.80:28,0,88	0/0:31,0:30:62.48:0,62,2122	0/0:21,0:21:39.02:0,39,1037	0/0:40,0:40:99:0,99,2899	0/0:12,0:12:36.02:0,36,1108	0/0:24,0:24:61.43:0,61,1644	0/1:15,1:15:13.90:448,0,14	0/0:23,0:23:59.72:0,60,1898
chr10	107154235	.	ACACACACT	A	1075.37	PASS	AB=0.925;AC=9;AF=0.161;AN=56;BaseQRankSum=7.565;DP=636;FS=15.673;HRun=0;HaplotypeScore=147.9094;InbreedingCoeff=0.3550;MQ=48.66;MQ0=52;MQRankSum=-6.456;QD=10.65;ReadPosRankSum=0.666;VQSLOD=1.6855;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:86.61:0,87,1597	1/1:4,0:4:2.44:86,2,0	0/0:54,0:13:38.65:0,39,314	0/0:58,0:8:17.92:0,18,150	0/0:16,0:15:30.02:0,30,636	0/0:20,0:20:47.91:0,48,1039	0/0:27,0:26:63.38:0,63,1123	0/1:18,0:16:11.35:11,0,111	0/0:21,0:21:57.80:0,58,1382	0/0:29,0:27:77.76:0,78,1889	0/0:19,0:19:42.07:0,42,1079	1/1:11,0:11:22.91:529,23,0	0/0:17,0:17:46.18:0,46,533	0/0:14,0:14:30.05:0,30,713	0/0:19,0:19:35.86:0,36,914	0/0:11,0:11:20.28:0,20,405	0/0:25,0:24:57.07:0,57,1390	0/0:20,0:20:58.33:0,58,1607	0/1:15,0:14:26.17:26,0,159	0/1:7,2:8:2.79:154,0,3	0/1:27,1:25:7.68:8,0,88	0/0:30,0:29:62.62:0,63,1752	0/0:20,0:20:35.93:0,36,824	0/0:39,0:39:99:0,99,2378	0/0:13,0:13:39.01:0,39,918	0/0:23,0:23:57.94:0,58,1328	0/1:13,3:15:13.90:402,0,14	0/0:23,0:23:58.69:0,59,1522
chr10	107154241	.	ACT	A	286.12	PASS	AB=0.991;AC=9;AF=0.161;AN=56;BaseQRankSum=8.597;DP=649;FS=39.730;HRun=0;HaplotypeScore=99.7104;InbreedingCoeff=0.3250;MQ=51.08;MQ0=50;MQRankSum=-4.373;QD=2.72;ReadPosRankSum=-0.962;VQSLOD=0.4760;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:88.76:0,89,798	1/1:5,0:5:3.47:30,3,0	0/0:61,0:13:38.65:0,39,314	0/0:67,0:14:10.73:0,11,205	0/0:12,0:12:24.01:0,24,290	0/0:22,0:22:44.84:0,45,444	0/0:28,0:27:53.99:0,54,629	0/1:18,0:17:10.43:10,0,102	0/0:21,0:21:59.78:0,60,621	0/0:27,0:25:69.29:0,69,796	0/1:18,0:18:9.63:10,0,373	1/1:13,0:13:22.34:218,22,0	0/0:15,0:15:14.54:0,15,219	0/0:14,0:14:16.19:0,16,215	0/0:18,0:18:29.80:0,30,362	0/0:10,0:10:9.26:0,9,146	0/0:25,3:27:26.72:0,27,610	0/0:21,0:21:56.46:0,56,697	0/0:15,0:14:30.70:0,31,190	0/1:10,0:9:5.82:30,0,6	0/0:27,0:24:16.47:0,16,107	0/0:29,0:29:52.90:0,53,637	0/0:20,0:20:32.89:0,33,356	0/0:36,0:36:64.24:0,64,844	0/0:12,0:12:22.53:0,23,288	0/0:22,0:22:52.76:0,53,606	0/1:19,0:18:28.88:120,0,29	0/1:21,1:22:5.90:6,0,442
chr10	107154250	.	G	GAGAA	3870.62	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=1.423;DP=700;FS=1.470;HRun=0;HaplotypeScore=119.6454;InbreedingCoeff=0.9306;MQ=53.29;MQ0=55;MQRankSum=-7.792;QD=19.95;ReadPosRankSum=-6.216;VQSLOD=2.3050;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:92.99:0,93,1618	1/1:4,0:5:14:208,14,0	0/1:69,0:14:1.48:1,0,536	0/0:79,0:19:11.86:0,12,358	0/0:16,0:16:32.92:0,33,472	0/0:21,0:21:47.89:0,48,851	0/0:30,0:29:72.08:0,72,1169	1/1:5,17:24:43.01:1142,43,0	0/0:20,0:20:57.14:0,57,974	0/0:32,0:30:78.19:0,78,1254	0/0:15,0:15:36.11:0,36,634	1/1:8,6:14:35.89:566,36,0	0/0:15,0:15:38.95:0,39,663	0/0:16,0:16:30.07:0,30,505	0/0:19,0:19:42.07:0,42,625	0/0:11,0:11:20.22:0,20,301	0/0:29,0:28:75.15:0,75,1220	0/0:23,0:23:69.13:0,69,1141	1/1:6,12:18:45.05:830,45,0	1/1:4,7:10:21.13:166,21,0	1/1:7,20:29:21.04:371,21,0	0/0:28,0:28:57.55:0,58,1028	0/0:19,0:19:36.11:0,36,649	0/0:41,0:41:99:0,108,1803	0/0:11,0:11:33.10:0,33,584	0/0:24,0:24:62.55:0,63,1051	1/1:9,9:18:14.28:585,14,0	0/0:16,0:16:41.90:0,42,619
chr10	107156629	.	GTGTGTGCCTC	G	2298.84	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-0.967;DP=647;FS=29.597;HRun=0;HaplotypeScore=188.6448;InbreedingCoeff=0.8028;MQ=60.83;MQ0=6;MQRankSum=-0.952;QD=21.89;ReadPosRankSum=0.908;VQSLOD=1.1009;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:72.25:0,72,2225	0/0:15,0:15:27.09:0,27,721	0/0:30,0:23:12.02:0,12,209	0/0:35,0:23:18.03:0,18,381	0/0:15,0:15:30.10:0,30,963	0/0:25,0:25:58.12:0,58,1820	0/0:36,0:36:63.67:0,64,2049	0/1:13,0:13:99:185,0,104	0/0:31,0:31:75.26:0,75,2465	0/0:26,0:26:54.18:0,54,1449	0/0:10,0:10:18.06:0,18,560	0/0:23,0:23:48.16:0,48,1541	0/0:12,0:12:33.11:0,33,1244	0/0:20,0:20:36.12:0,36,1084	0/0:21,0:21:39.13:0,39,1214	0/0:23,0:23:60.20:0,60,1804	0/0:43,0:43:93.11:0,93,3209	0/0:25,0:25:57.20:0,57,1984	1/1:21,1:22:18.06:443,18,0	1/1:6,6:12:3.01:85,3,0	1/1:40,0:39:60.21:1247,60,0	0/0:20,0:20:51.16:0,51,1386	0/0:12,0:12:30.10:0,30,819	0/0:46,0:46:93.89:0,94,3449	0/0:16,0:16:30.10:0,30,1071	0/0:20,0:20:39.13:0,39,1196	1/1:18,0:18:24.08:494,24,0	0/0:7,0:7:21.07:0,21,510
chr10	107157055	.	G	GAAAAAAA	3754.23	PASS	AB=0.938;AC=13;AF=0.232;AN=56;BaseQRankSum=2.830;DP=469;FS=2.435;HRun=11;HaplotypeScore=121.3757;InbreedingCoeff=0.9075;MQ=57.83;MQ0=9;MQRankSum=-9.247;QD=34.44;ReadPosRankSum=-8.358;VQSLOD=-0.4518;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:35:85.85:0,86,1629	1/1:6,0:6:12.04:406,12,0	0/0:10,0:7:11.14:0,11,162	0/0:17,0:12:15.17:0,15,363	0/0:21,0:21:41.78:0,42,797	0/0:21,0:21:41.85:0,42,781	0/0:13,0:15:20.68:0,21,379	1/1:19,8:29:29.80:792,30,0	0/0:12,0:12:27.09:0,27,521	0/1:14,0:15:2.18:2,0,257	0/0:15,0:15:32.84:0,33,574	0/0:8,0:9:22.15:0,22,429	0/0:17,0:18:41.76:0,42,703	0/0:12,0:12:26.92:0,27,521	0/0:17,0:17:38.89:0,39,712	0/0:12,0:12:30.01:0,30,513	0/0:34,0:33:93.20:0,93,1697	0/0:22,0:25:65.86:0,66,1039	1/1:13,0:20:42.14:907,42,0	1/1:6,4:12:24.08:663,24,0	1/1:9,0:9:18.91:315,19,0	0/0:13,0:13:23.67:0,24,423	0/0:9,0:9:21.07:0,21,366	0/0:22,0:23:53.94:0,54,991	0/0:6,0:6:12.04:0,12,232	0/0:22,0:22:47.79:0,48,892	1/1:11,6:17:24.08:669,24,0	0/0:6,0:7:17.94:0,18,292
chr10	107157295	.	CA	C	5827.45	PASS	AB=0.949;AC=50;AF=0.893;AN=56;BaseQRankSum=2.755;DP=552;FS=0.000;HRun=1;HaplotypeScore=169.8868;InbreedingCoeff=-0.1378;MQ=78.82;MQ0=0;MQRankSum=-5.383;QD=10.56;ReadPosRankSum=8.031;VQSLOD=2.4940;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:42:61.26:405,61,0	1/1:5,0:5:13.93:65,14,0	0/1:18,4:21:50.49:50,0,73	0/1:18,1:18:60.53:61,0,77	0/1:14,0:14:17.56:118,0,18	0/1:20,0:20:3.36:157,0,3	1/1:27,0:27:67.96:353,68,0	1/1:19,0:19:22.08:174,22,0	1/1:21,0:21:18.36:219,18,0	1/1:15,0:15:33.19:141,33,0	0/1:8,1:9:4.39:56,0,4	1/1:29,0:29:32.85:299,33,0	1/1:12,1:13:32.26:224,32,0	1/1:20,0:20:24.22:253,24,0	1/1:21,0:21:50.94:283,51,0	1/1:11,0:11:28.62:158,29,0	1/1:42,0:42:99:559,110,0	1/1:35,0:35:73.18:455,73,0	1/1:20,0:20:5.77:199,6,0	1/1:11,0:11:1.73:60,2,0	1/1:23,0:23:52.80:259,53,0	1/1:12,0:12:5.65:100,6,0	1/1:11,0:11:27.83:132,28,0	1/1:32,0:32:66.28:407,66,0	1/1:11,0:11:0.17:76,0,0	1/1:19,0:19:51.55:256,52,0	1/1:16,0:16:42.91:244,43,0	0/1:13,0:13:60.30:66,0,60
chr10	107157299	.	CA	C	6227.93	PASS	AB=1.000;AC=54;AF=0.964;AN=56;BaseQRankSum=4.660;DP=563;FS=1.681;HRun=1;HaplotypeScore=168.8337;InbreedingCoeff=-0.0446;MQ=78.59;MQ0=0;MQRankSum=-2.896;QD=11.06;ReadPosRankSum=7.287;VQSLOD=3.0892;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:45,1:46:47.41:410,47,0	1/1:5,0:5:14.17:75,14,0	0/1:24,0:23:41.04:41,0,131	0/1:19,0:18:50.10:50,0,92	1/1:12,0:12:25.59:147,26,0	1/1:18,0:18:9.73:176,10,0	1/1:31,0:31:42.41:344,42,0	1/1:19,0:19:29.23:169,29,0	1/1:20,0:20:40.47:247,40,0	1/1:15,0:15:33.66:162,34,0	1/1:8,0:8:16.56:76,17,0	1/1:29,1:30:42.94:340,43,0	1/1:13,0:13:32.33:209,32,0	1/1:19,0:19:46.31:275,46,0	1/1:20,1:21:52.07:329,52,0	1/1:12,0:12:28.69:160,29,0	1/1:44,0:44:99:587,111,0	1/1:38,0:38:56.21:438,56,0	1/1:19,1:20:52.35:293,52,0	1/1:11,0:11:16.79:83,17,0	1/1:25,0:25:33.72:266,34,0	1/1:11,0:11:27.85:135,28,0	1/1:12,0:12:6.30:122,6,0	1/1:34,1:35:25.24:400,25,0	1/1:10,0:10:22.01:99,22,0	1/1:19,0:19:51.21:255,51,0	1/1:17,0:17:42.71:227,43,0	1/1:9,0:9:19.71:113,20,0
chr10	107157613	.	AGT	A	317.35	PASS	AB=0.948;AC=18;AF=0.375;AN=48;BaseQRankSum=3.003;DP=602;FS=0.000;HRun=0;HaplotypeScore=90.7360;InbreedingCoeff=-0.2462;MQ=67.06;MQ0=16;MQRankSum=2.508;QD=0.88;ReadPosRankSum=-0.101;VQSLOD=1.2713;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:20.09:20,0,518	./.	./.	./.	0/1:8,3:10:26.61:27,0,39	0/0:16,0:16:18.03:0,18,238	0/1:33,2:35:23.23:23,0,398	./.	0/1:20,1:20:5.60:6,0,263	0/1:14,0:14:17.57:18,0,145	0/1:10,1:11:23.72:24,0,51	0/0:26,0:26:15.12:0,15,144	0/0:16,0:16:21.01:0,21,263	0/0:11,0:12:9.02:0,9,115	0/1:17,3:20:14.58:15,0,183	0/0:18,0:19:17.93:0,18,194	0/1:41,0:42:36.17:36,0,604	0/0:30,0:29:39.02:0,39,502	0/1:15,1:15:20.91:27,0,21	0/1:5,0:6:5.47:5,0,22	1/1:40,12:53:14.45:157,14,0	0/0:12,0:12:24.03:0,24,331	0/1:18,0:17:14.76:15,0,172	0/1:32,0:32:12.91:13,0,265	0/0:10,0:9:15.03:0,15,195	0/1:20,0:20:38.17:38,0,215	1/1:15,0:16:5.80:34,6,0	0/1:10,0:9:12.84:13,0,131
chr10	107157615	.	T	TGA	114.77	PASS	AB=0.935;AC=8;AF=0.143;AN=56;BaseQRankSum=3.525;DP=611;FS=20.750;HRun=0;HaplotypeScore=100.1425;InbreedingCoeff=0.1399;MQ=65.21;MQ0=16;MQRankSum=-0.559;QD=1.06;ReadPosRankSum=-4.001;VQSLOD=-0.5866;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:33.39:0,33,781	1/1:2,0:2:5.97:46,6,0	0/0:32,0:11:26.07:0,26,298	0/0:44,0:24:62.36:0,62,553	0/0:11,0:10:20.94:0,21,187	0/0:16,0:16:26.99:0,27,308	0/0:35,0:35:41.57:0,42,669	0/0:21,0:17:41.98:0,42,376	0/0:20,0:19:44.83:0,45,444	0/1:15,0:15:3.42:3,0,270	0/0:12,0:12:18.34:0,18,205	0/1:9,16:25:48.92:155,0,49	0/0:16,0:16:37.97:0,38,407	0/1:12,0:12:8.35:8,0,147	0/0:19,0:19:38.97:0,39,396	0/0:20,0:20:19.40:0,19,320	0/0:43,0:43:26.11:0,26,981	0/0:31,0:30:69.46:0,69,720	0/1:17,0:16:3.10:3,0,173	0/0:6,0:6:14.72:0,15,102	0/0:53,0:53:59.56:0,60,553	0/0:12,0:12:35.98:0,36,417	0/0:19,0:18:32.78:0,33,336	0/0:33,0:33:38.72:0,39,623	0/0:11,0:10:26.97:0,27,286	0/1:19,0:19:11.42:11,0,379	0/1:18,0:17:1.23:1,0,237	0/0:10,0:9:26.90:0,27,259
chr10	107158180	.	C	CA	1340.12	PASS	AB=0.957;AC=18;AF=0.321;AN=56;BaseQRankSum=8.685;DP=431;FS=4.998;HRun=12;HaplotypeScore=70.1718;InbreedingCoeff=0.4327;MQ=67.88;MQ0=4;MQRankSum=-1.713;QD=6.84;ReadPosRankSum=-1.912;VQSLOD=2.0105;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:32:29.21:0,29,500	1/1:5,0:5:8.52:42,9,0	0/0:8,1:7:10.95:0,11,71	0/1:13,0:9:18.50:19,0,31	0/0:22,0:24:38.66:0,39,284	0/0:14,0:14:32.80:0,33,241	0/1:8,1:9:8.36:8,0,108	1/1:11,15:26:1.23:326,1,0	0/0:10,0:10:20.88:0,21,153	0/0:14,0:14:7.36:0,7,156	0/1:16,2:18:44.88:45,0,179	0/0:9,0:9:17.80:0,18,127	0/0:12,0:12:20.80:0,21,152	0/1:10,0:10:8.55:9,0,97	0/1:13,0:10:11.32:11,0,92	0/0:8,0:8:14.88:0,15,108	0/0:23,1:24:24.90:0,25,338	0/1:15,1:17:0.44:0,0,195	1/1:13,8:19:5.09:198,5,0	1/1:11,10:21:6.02:213,6,0	1/1:7,11:18:18.03:175,18,0	0/0:6,0:6:11.93:0,12,88	0/0:11,0:12:25.86:0,26,181	0/0:9,0:9:11.90:0,12,87	0/0:21,2:23:23.04:0,23,323	0/0:18,0:18:41.72:0,42,305	1/1:17,8:23:54.99:467,55,0	0/0:10,0:10:21.74:0,22,155
chr10	107158453	.	CCCA	C	4951.96	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.317;DP=664;FS=10.574;HRun=0;HaplotypeScore=97.4243;InbreedingCoeff=0.9971;MQ=87.59;MQ0=0;MQRankSum=-4.156;QD=37.23;ReadPosRankSum=-0.341;VQSLOD=5.0368;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,135,2811	0/0:8,0:8:21.06:0,21,416	0/0:23,0:23:57.19:0,57,1143	0/0:32,0:32:75.24:0,75,1534	0/0:15,0:15:45.14:0,45,941	0/0:20,0:20:60.21:0,60,1282	0/0:26,0:26:75.24:0,75,1633	1/1:2,24:26:69.21:1072,69,0	0/0:21,0:21:63.19:0,63,1303	0/0:27,0:27:78.26:0,78,1655	0/0:19,0:19:48.16:0,48,1055	0/0:18,0:18:51.16:0,51,1068	0/0:28,0:28:84.29:0,84,1827	0/0:23,0:23:60.20:0,60,1293	0/0:15,0:15:42.14:0,42,922	0/0:29,0:29:84.26:0,84,1734	0/0:39,0:39:99:0,114,2502	0/0:26,0:26:75.26:0,75,1652	1/1:4,21:25:63.12:906,63,0	1/1:0,9:8:21.07:343,21,0	1/1:1,40:41:93.04:1420,93,0	0/0:19,0:19:54.18:0,54,1142	0/0:17,0:17:42.14:0,42,875	0/0:21,0:21:60.21:0,60,1316	0/0:23,0:23:57.20:0,57,1273	0/0:26,0:26:75.26:0,75,1644	1/1:3,29:32:75.62:1211,76,0	0/0:7,0:7:21.07:0,21,445
chr10	107159485	.	AGCCATCCCTGG	A	867.42	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.024;DP=518;FS=0.000;HRun=0;HaplotypeScore=155.9743;InbreedingCoeff=0.9394;MQ=61.11;MQ0=7;MQRankSum=-4.911;QD=78.86;ReadPosRankSum=1.181;VQSLOD=3.5621;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.33:0,96,5428	1/1:0,11:11:27.09:961,27,0	0/0:8,0:4:12.04:0,12,478	0/0:10,0:6:18.06:0,18,646	0/0:20,0:20:60.21:0,60,3298	0/0:15,0:15:45.15:0,45,2530	0/0:26,0:26:78.27:0,78,3943	0/0:16,0:15:42.14:0,42,2079	0/0:27,0:27:76.14:0,76,4323	0/0:18,0:18:51.18:0,51,2872	0/0:5,0:5:15.05:0,15,865	0/0:23,0:23:66.23:0,66,3717	0/0:22,0:22:63.22:0,63,3553	0/0:17,0:17:48.16:0,48,2753	0/0:16,0:16:48.16:0,48,2563	0/0:18,0:18:54.19:0,54,3101	0/0:41,0:41:99:0,120,6452	0/0:33,0:33:99:0,99,5644	0/0:20,0:16:39.13:0,39,2079	0/0:7,0:6:18.06:0,18,916	0/0:25,0:25:72.21:0,72,3713	0/0:13,0:13:39.13:0,39,2245	0/0:10,0:10:30.10:0,30,1628	0/0:25,0:25:75.25:0,75,3871	0/0:15,0:15:42.14:0,42,2242	0/0:14,0:14:42.14:0,42,2335	0/0:15,0:15:42.14:0,42,2288	0/0:14,0:14:39.09:0,39,1803
chr10	107159839	.	GTTT	G	1608.59	PASS	AB=0.947;AC=13;AF=0.232;AN=56;BaseQRankSum=6.438;DP=522;FS=5.063;HRun=14;HaplotypeScore=84.3513;InbreedingCoeff=0.9168;MQ=69.02;MQ0=2;MQRankSum=-2.653;QD=16.41;ReadPosRankSum=1.967;VQSLOD=2.7982;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:34:86.86:0,87,1392	1/1:2,7:9:21.05:245,21,0	0/1:17,0:7:5.23:9,0,5	0/0:24,0:16:23.37:0,23,283	0/0:13,0:15:42.09:0,42,688	0/0:18,0:20:60.17:0,60,998	0/0:24,0:26:55.36:0,55,894	1/1:7,9:17:22.01:249,22,0	0/0:20,0:21:54.18:0,54,965	0/0:23,0:25:60.10:0,60,945	0/0:11,0:11:27.09:0,27,479	0/0:3,0:12:14.20:0,14,48	0/0:12,0:12:27.08:0,27,474	0/0:12,0:13:39.12:0,39,646	0/0:22,0:22:53.36:0,53,868	0/0:10,0:10:27.09:0,27,492	0/0:30,0:31:75.24:0,75,1345	0/0:31,0:34:69.13:0,69,1050	1/1:7,15:22:41.92:451,42,0	1/1:0,5:5:15.04:175,15,0	1/1:1,6:7:15.02:175,15,0	0/0:19,0:19:43.96:0,44,738	0/0:13,0:16:39.11:0,39,684	0/0:28,0:30:78.12:0,78,1234	0/0:7,0:7:18.06:0,18,326	0/0:21,0:22:52.35:0,52,817	1/1:1,17:19:44.98:491,45,0	0/0:18,0:19:51.07:0,51,751
chr10	107159879	.	G	GGT	1632.25	PASS	AB=0.827;AC=9;AF=0.161;AN=56;BaseQRankSum=7.169;DP=476;FS=2.020;HRun=0;HaplotypeScore=91.9215;InbreedingCoeff=0.5819;MQ=62.98;MQ0=4;MQRankSum=-7.835;QD=16.83;ReadPosRankSum=-2.357;VQSLOD=3.3832;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:75.21:0,75,904	0/0:6,0:6:4.73:0,5,102	0/0:29,0:14:17.94:0,18,177	0/1:21,0:9:19.44:19,0,39	0/0:18,0:18:48.15:0,48,589	0/0:15,0:15:27.05:0,27,315	0/0:23,0:24:54:0,54,641	1/1:16,9:24:57.01:719,57,0	0/0:16,0:16:30.09:0,30,369	0/0:30,0:30:72.23:0,72,886	0/0:12,0:12:30.08:0,30,357	0/0:10,0:10:18.02:0,18,181	0/0:5,0:5:9.03:0,9,111	0/0:12,0:12:30.08:0,30,358	0/0:7,0:7:9.03:0,9,111	0/0:6,0:6:11.87:0,12,125	0/0:20,0:20:54.17:0,54,664	0/0:27,0:27:47.67:0,48,577	0/1:6,9:15:4.57:410,0,5	1/1:6,4:10:11.94:194,12,0	0/1:10,2:12:25.91:60,0,26	0/0:14,0:14:33.10:0,33,403	0/0:15,0:15:36.11:0,36,442	0/0:32,0:31:78.25:0,78,960	0/0:9,0:9:21.07:0,21,259	0/0:19,0:21:50.98:0,51,593	1/1:6,8:13:24.08:385,24,0	0/0:18,0:18:44.97:0,45,531
chr10	107159894	.	GCT	G	593.92	PASS	AB=0.974;AC=9;AF=0.161;AN=56;BaseQRankSum=7.307;DP=484;FS=6.095;HRun=0;HaplotypeScore=82.0581;InbreedingCoeff=0.0933;MQ=58.80;MQ0=12;MQRankSum=-7.087;QD=4.43;ReadPosRankSum=-2.889;VQSLOD=0.5463;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1973	0/1:4,0:4:8.30:8,0,103	0/1:30,2:9:2.76:3,0,180	0/1:22,0:8:10.75:11,0,73	0/0:21,0:21:59.94:0,60,1118	0/0:13,0:13:39.13:0,39,739	0/0:23,0:23:69.02:0,69,1267	0/1:25,3:27:99:198,0,269	0/0:13,0:13:36.10:0,36,680	0/0:32,0:32:83.72:0,84,1764	0/0:11,0:11:33.11:0,33,649	0/0:9,0:9:24.51:0,25,267	0/0:5,0:5:15.05:0,15,282	0/0:13,0:13:39.13:0,39,762	0/0:5,0:5:15.05:0,15,268	0/0:7,1:7:16.37:0,16,262	0/0:23,0:23:69.20:0,69,1321	0/0:27,0:27:48.52:0,49,1259	0/1:15,0:15:98.25:98,0,177	1/1:8,0:8:18.03:188,18,0	0/1:13,0:13:34.79:51,0,35	0/0:16,0:16:42.14:0,42,821	0/0:18,0:18:50.76:0,51,897	0/0:30,1:30:87.77:0,88,1706	0/0:9,0:9:27.09:0,27,530	0/0:20,0:20:39.63:0,40,1058	0/1:11,0:10:32.85:176,0,33	0/0:16,0:16:47.90:0,48,872
chr10	107159906	.	GTGCT	G	2200.94	PASS	AB=0.810;AC=14;AF=0.250;AN=56;BaseQRankSum=11.151;DP=488;FS=1.788;HRun=0;HaplotypeScore=94.0545;InbreedingCoeff=0.7890;MQ=56.60;MQ0=15;MQRankSum=-9.509;QD=21.37;ReadPosRankSum=-5.882;VQSLOD=1.8130;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,109,2944	1/1:5,0:5:2.37:44,2,0	0/0:28,0:4:12.04:0,12,204	0/1:20,0:5:2.23:2,0,93	0/0:19,0:19:57.17:0,57,1336	0/0:13,0:13:36.12:0,36,931	0/0:29,0:29:84.20:0,84,2082	1/1:6,14:19:39.07:681,39,0	0/0:14,0:14:36.11:0,36,944	0/0:36,0:36:99:0,102,2602	0/0:12,0:12:36.12:0,36,955	1/1:8,0:8:8.36:68,8,0	0/0:5,0:5:15.05:0,15,410	0/0:12,0:12:36.12:0,36,983	0/0:5,0:5:15.05:0,15,379	0/0:6,0:5:10.32:0,10,291	0/0:23,0:23:66.23:0,66,1706	0/0:31,0:31:20.67:0,21,2058	0/1:5,8:13:5.60:458,0,6	1/1:2,7:9:21.07:341,21,0	1/1:9,7:16:14.33:227,14,0	0/0:17,0:17:45.15:0,45,1136	0/0:18,0:18:48.16:0,48,1293	0/0:32,0:31:90.20:0,90,2203	0/0:9,0:9:27.09:0,27,693	0/0:22,0:22:63.22:0,63,1654	1/1:2,10:12:30.10:557,30,0	0/0:15,0:15:42.14:0,42,1095
chr10	107159908	.	GCT	G	1266.85	PASS	AB=0.938;AC=14;AF=0.250;AN=56;BaseQRankSum=11.810;DP=474;FS=0.000;HRun=0;HaplotypeScore=77.9137;InbreedingCoeff=0.7411;MQ=56.94;MQ0=14;MQRankSum=-9.471;QD=13.06;ReadPosRankSum=-5.693;VQSLOD=2.2379;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,2193	1/1:2,2:5:5.91:61,6,0	0/0:27,0:4:0.04:0,0,125	0/1:19,0:5:49.76:50,0,53	0/0:19,0:19:56.98:0,57,1063	0/0:12,0:12:36.12:0,36,708	0/0:29,0:29:87.21:0,87,1652	1/1:15,2:16:38.82:319,39,0	0/0:13,0:13:36.12:0,36,712	0/0:36,0:36:99:0,105,2025	0/0:12,0:12:36.12:0,36,731	1/1:1,0:8:19.98:118,20,0	0/0:5,0:5:15.05:0,15,304	0/0:12,0:12:36.12:0,36,731	0/0:5,0:5:15.05:0,15,294	0/0:5,0:5:9.30:0,9,230	0/0:23,0:23:69.24:0,69,1353	0/0:29,2:31:28.17:0,28,1558	0/1:11,1:12:7.93:189,0,8	1/1:8,0:8:21.06:248,21,0	1/1:13,3:16:14.33:154,14,0	0/0:17,0:17:45.15:0,45,880	0/0:16,0:16:48.16:0,48,964	0/0:30,0:29:90.20:0,90,1672	0/0:9,0:9:27.09:0,27,523	0/0:22,0:22:63.22:0,63,1254	1/1:11,0:10:30:312,30,0	0/0:14,0:14:42.14:0,42,816
chr10	107159910	.	T	TGTG	275.68	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=4.951;DP=478;FS=9.664;HRun=0;HaplotypeScore=95.7341;InbreedingCoeff=0.5181;MQ=57.06;MQ0=13;MQRankSum=-2.715;QD=7.66;ReadPosRankSum=-4.045;VQSLOD=0.5152;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,2013	1/1:4,1:5:4.38:17,4,0	0/0:25,0:4:12.04:0,12,170	0/0:19,0:5:13.60:0,14,107	0/0:20,0:20:57.17:0,57,953	0/0:13,0:13:39.12:0,39,695	0/0:29,0:29:87.30:0,87,1594	0/0:16,0:16:37.80:0,38,216	0/0:13,0:13:36.12:0,36,670	0/0:35,0:35:99:0,102,1868	0/0:12,0:12:36.12:0,36,655	1/1:2,7:9:21.23:287,21,0	0/0:6,0:6:18.05:0,18,305	0/0:13,0:13:36.12:0,36,671	0/0:5,0:5:15.05:0,15,279	0/0:6,0:5:14.06:0,14,199	0/0:24,0:24:69.21:0,69,1209	0/0:33,0:33:91.52:0,92,1573	0/1:13,0:13:70.98:71,0,136	0/1:9,0:9:26.07:26,0,59	0/0:16,0:16:8.32:0,8,44	0/0:17,0:17:45.15:0,45,806	0/0:16,0:16:48.16:0,48,895	0/0:29,0:28:87.25:0,87,1558	0/0:9,0:9:27.09:0,27,503	0/0:21,0:21:63.22:0,63,1148	0/0:11,0:10:22.84:0,23,138	0/0:14,0:14:42.14:0,42,767
chr10	107159979	.	CGT	C	955.99	PASS	AB=0.924;AC=22;AF=0.423;AN=52;BaseQRankSum=4.856;DP=533;FS=7.325;HRun=0;HaplotypeScore=84.9697;InbreedingCoeff=-0.0103;MQ=52.01;MQ0=14;MQRankSum=0.920;QD=2.59;ReadPosRankSum=-0.092;VQSLOD=1.0349;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,5:43:42.66:43,0,602	0/0:7,0:7:8.68:0,9,66	./.	./.	0/1:12,1:13:18.23:18,0,163	0/1:23,4:26:63.74:64,0,345	0/1:18,3:20:51.48:51,0,121	1/1:16,0:12:2.22:7,2,0	0/0:18,0:18:11.29:0,11,101	0/0:20,0:20:13.78:0,14,166	0/0:13,0:13:21.06:0,21,292	0/0:18,0:16:17.83:0,18,170	0/0:10,0:10:11.99:0,12,135	0/1:17,0:17:11.26:11,0,163	0/1:13,1:13:47.20:47,0,163	1/1:8,1:13:12:76,12,0	0/1:32,8:40:99:115,0,462	0/1:29,1:31:16.35:16,0,396	0/1:13,4:17:3.36:98,0,3	1/1:15,2:17:14.43:136,14,0	1/1:40,11:53:25.45:355,25,0	0/1:10,0:10:20.78:21,0,119	0/0:12,0:12:9.03:0,9,135	0/0:25,2:26:17.82:0,18,610	0/1:14,0:14:16.28:16,0,137	0/0:16,0:16:17.68:0,18,195	1/1:8,1:9:2.59:33,3,0	0/1:11,0:10:15.08:15,0,208
chr10	107161119	.	C	CA	7880.80	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-15.083;DP=674;FS=10.662;HRun=0;HaplotypeScore=62.1702;InbreedingCoeff=0.9999;MQ=83.12;MQ0=0;MQRankSum=-0.843;QD=44.27;ReadPosRankSum=-0.664;VQSLOD=4.3066;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1597	0/0:12,0:12:36.12:0,36,499	0/0:20,0:20:51.17:0,51,697	0/0:18,0:18:47.60:0,48,582	0/0:22,0:22:66.13:0,66,873	0/0:14,0:14:36.12:0,36,502	0/0:21,0:21:63.21:0,63,880	1/1:0,28:28:84.26:1294,84,0	0/0:30,0:30:87.27:0,87,1181	0/0:18,0:18:48.16:0,48,658	0/0:11,0:11:33.11:0,33,461	1/1:1,23:24:63.21:1006,63,0	0/0:15,0:15:45.14:0,45,611	0/0:27,0:27:81.25:0,81,1094	0/0:26,0:26:78.17:0,78,1043	0/0:19,0:19:57.18:0,57,778	0/0:30,0:30:87.21:0,87,1157	0/0:22,0:22:63.21:0,63,880	1/1:1,36:37:99:1698,108,0	1/1:1,25:26:63.21:1006,63,0	1/1:0,36:36:99:1582,99,0	0/0:27,0:27:81.26:0,81,1112	0/0:26,0:26:66.22:0,66,915	0/0:30,0:30:90.24:0,90,1202	0/0:22,0:22:66.19:0,66,896	0/0:27,0:27:78.26:0,78,1087	1/1:0,27:27:81.28:1294,81,0	0/0:19,0:19:54.18:0,54,753
chr10	107161211	.	A	AAC	1237.24	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.671;DP=786;FS=13.082;HRun=0;HaplotypeScore=102.2600;InbreedingCoeff=0.8684;MQ=68.18;MQ0=3;MQRankSum=-0.753;QD=33.44;ReadPosRankSum=-1.326;VQSLOD=4.5142;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,114,1356	0/0:2,0:12:25.57:0,26,126	0/0:36,0:29:42.24:0,42,623	0/0:27,0:22:4.02:0,4,402	0/0:21,0:21:57.16:0,57,680	0/0:21,0:22:47.98:0,48,560	0/0:23,0:23:63.16:0,63,738	0/0:31,0:32:54.14:0,54,627	0/0:31,0:31:66.17:0,66,771	0/0:40,0:40:95.64:0,96,1127	0/0:27,0:28:69.03:0,69,803	1/1:10,27:36:68.16:1332,68,0	0/0:23,0:23:57.17:0,57,692	0/0:31,0:31:72.19:0,72,849	0/0:32,0:32:84.25:0,84,1009	0/0:14,0:15:35.94:0,36,414	0/0:37,0:38:89.94:0,90,1047	0/0:32,0:32:63.87:0,64,949	0/0:14,0:15:26.91:0,27,305	0/0:25,0:25:63.19:0,63,764	0/0:38,0:38:90.28:0,90,1091	0/0:20,0:21:53.98:0,54,619	0/0:23,0:23:48.13:0,48,567	0/0:33,0:35:80.90:0,81,922	0/0:28,0:30:66.03:0,66,778	0/0:22,0:22:48.15:0,48,582	0/0:26,0:26:66.19:0,66,789	0/0:24,0:24:66.17:0,66,785
chr10	107162758	.	G	GA	1038.13	PASS	AB=0.871;AC=13;AF=0.232;AN=56;BaseQRankSum=1.265;DP=490;FS=1.946;HRun=12;HaplotypeScore=91.6104;InbreedingCoeff=0.3850;MQ=54.05;MQ0=31;MQRankSum=-2.160;QD=5.55;ReadPosRankSum=-3.380;VQSLOD=1.8412;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:18:23.03:0,23,154	0/0:8,0:9:19.90:0,20,137	0/0:7,0:4:0.40:0,0,1	0/0:12,0:2:1.59:0,2,4	0/0:32,1:34:25.37:0,25,322	0/0:10,0:10:11.76:0,12,79	0/0:18,0:18:22.77:0,23,156	1/1:8,10:19:10.96:242,11,0	0/0:15,0:13:20.78:0,21,151	0/1:19,2:23:26.20:26,0,132	0/0:13,0:13:14.82:0,15,109	0/0:16,0:14:0.35:0,0,17	0/0:8,0:8:5.87:0,6,44	0/0:9,0:8:5.89:0,6,43	0/0:14,0:12:20.77:0,21,152	0/0:7,0:7:5.93:0,6,44	0/0:33,0:30:44.41:0,44,313	0/0:23,0:23:28:0,28,293	1/1:13,9:22:12.79:262,13,0	1/1:6,14:21:22.02:257,22,0	1/1:4,4:6:12.02:116,12,0	0/0:12,0:12:8.56:0,9,65	0/1:18,1:19:9.58:10,0,79	0/1:21,2:24:52.31:52,0,146	0/0:18,0:18:25.51:0,26,176	0/1:18,1:19:5.74:6,0,110	0/1:8,16:24:30.62:230,0,31	0/0:15,0:11:25.73:0,26,171
chr10	107163517	.	C	CA	908.17	PASS	AB=0.828;AC=11;AF=0.196;AN=56;BaseQRankSum=5.615;DP=600;FS=5.132;HRun=15;HaplotypeScore=78.4996;InbreedingCoeff=0.4517;MQ=57.50;MQ0=54;MQRankSum=-0.498;QD=5.61;ReadPosRankSum=-4.563;VQSLOD=1.4627;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,1:43:63.53:0,64,470	0/0:3,0:11:14.23:0,14,41	0/0:38,0:12:4.98:0,5,45	0/0:27,0:11:13.84:0,14,81	0/0:23,0:20:24.74:0,25,139	0/0:19,0:19:47.07:0,47,287	0/0:19,0:20:38.73:0,39,217	1/1:17,11:27:20.45:267,20,0	0/0:14,1:16:18.71:0,19,112	0/0:17,1:21:0.98:0,1,94	0/0:14,0:13:25.52:0,26,139	0/0:18,1:19:6.10:0,6,136	0/0:14,1:19:28.62:0,29,150	0/0:19,0:21:28.29:0,28,167	0/1:13,1:14:4.55:5,0,87	0/0:11,0:10:8.74:0,9,96	0/0:23,0:24:29.33:0,29,244	0/0:21,0:25:43.29:0,43,237	0/1:10,8:21:1.93:230,0,2	0/1:17,7:22:21.19:155,0,21	1/1:6,5:11:21.14:155,21,0	0/1:18,1:19:0.57:1,0,94	0/0:19,0:17:28.77:0,29,178	0/0:22,0:22:29.57:0,30,171	0/0:13,0:10:26.47:0,26,161	0/0:17,0:16:31.25:0,31,185	1/1:13,5:17:10.97:197,11,0	0/1:15,4:18:52.29:52,0,161
chr10	107165746	.	GTTTGT	G	429.39	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=3.615;DP=425;FS=28.127;HRun=0;HaplotypeScore=96.5939;InbreedingCoeff=0.2181;MQ=48.26;MQ0=20;MQRankSum=-0.351;QD=6.51;ReadPosRankSum=-1.870;VQSLOD=0.1492;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:55.03:0,55,1114	0/0:4,0:3:6.01:0,6,70	0/0:15,0:4:2.62:0,3,7	0/1:12,0:7:17.85:18,0,35	0/0:12,0:12:27.08:0,27,549	0/0:16,0:17:24.44:0,24,509	0/0:16,0:16:35.11:0,35,707	0/0:26,0:26:43.75:0,44,518	0/0:16,0:15:19.39:0,19,553	0/0:16,0:15:37.51:0,38,777	0/1:9,0:9:4.73:5,0,407	1/1:13,4:16:34.87:507,35,0	0/1:18,0:16:10.94:11,0,473	0/0:11,0:10:26.21:0,26,381	0/0:14,0:15:15.05:0,15,602	0/0:10,0:10:22.92:0,23,475	0/0:23,0:22:32.82:0,33,812	0/0:23,0:20:42.49:0,42,689	0/0:23,0:22:5.08:0,5,247	0/1:9,0:8:8.39:8,0,19	0/0:2,0:1:3.01:0,3,70	0/0:14,0:13:24.08:0,24,556	0/0:16,0:15:18.45:0,18,593	0/0:12,0:10:15.05:0,15,417	0/0:11,0:11:30.92:0,31,622	0/0:21,0:21:62.69:0,63,1352	0/0:15,0:15:26.74:0,27,562	0/0:13,0:10:8.47:0,8,218
chr10	107166352	.	A	ACACTCTCTCT	1587.90	PASS	AB=0.983;AC=13;AF=0.232;AN=56;BaseQRankSum=-3.715;DP=688;FS=14.844;HRun=0;HaplotypeScore=219.0163;InbreedingCoeff=0.6405;MQ=59.05;MQ0=21;MQRankSum=-3.230;QD=7.86;ReadPosRankSum=-4.874;VQSLOD=-0.3912;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:46:81.85:0,82,1815	0/1:7,0:7:44.41:70,0,44	0/0:25,0:11:12.48:0,12,170	0/1:25,0:16:14.65:15,0,110	0/0:12,0:12:29.68:0,30,504	0/0:22,0:22:54.01:0,54,671	0/0:27,0:26:72.39:0,72,1106	1/1:56,0:50:84.45:865,84,0	0/0:26,0:25:60.25:0,60,1116	0/0:24,0:24:63.11:0,63,992	0/0:12,0:13:21.02:0,21,450	0/1:18,0:19:3.66:4,0,248	0/0:19,0:21:56.63:0,57,1044	0/0:21,0:22:56.90:0,57,928	0/0:20,0:23:56.41:0,56,744	0/0:26,0:25:68.67:0,69,1311	0/0:30,0:31:27.66:0,28,1530	0/0:18,0:21:53.88:0,54,1215	1/1:16,0:13:21.91:307,22,0	1/1:3,10:20:3.24:18,3,0	1/1:44,0:44:30.03:393,30,0	0/0:25,0:24:47.48:0,47,544	0/0:23,0:23:47.53:0,48,509	0/0:24,0:24:62.35:0,62,1276	0/0:16,0:16:36.04:0,36,539	0/0:33,0:31:53.05:0,53,1129	1/1:1,9:14:2.84:83,3,0	0/0:13,0:15:36.04:0,36,727
chr10	107167468	.	A	AT	3681.47	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-5.516;DP=707;FS=11.072;HRun=9;HaplotypeScore=77.4209;InbreedingCoeff=0.9863;MQ=68.79;MQ0=2;MQRankSum=0.072;QD=24.54;ReadPosRankSum=-6.322;VQSLOD=0.9996;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,1221	0/0:9,0:9:23.99:0,24,208	0/0:21,0:20:13.67:0,14,219	0/0:21,0:17:35.62:0,36,289	0/0:31,0:31:71.91:0,72,611	0/0:16,0:16:38.99:0,39,338	0/0:22,1:23:26.78:0,27,453	1/1:10,33:43:76.19:1051,76,0	0/0:21,0:21:56.98:0,57,495	0/0:38,0:38:89.93:0,90,779	0/0:26,0:26:62.87:0,63,537	0/0:30,0:30:74.97:0,75,651	0/0:28,0:28:74.97:0,75,651	0/0:24,0:24:59.94:0,60,512	0/0:26,0:26:65.97:0,66,573	0/0:23,0:23:65.97:0,66,569	0/0:26,0:26:59.92:0,60,514	0/0:18,0:17:44.98:0,45,390	1/1:8,20:28:40.12:665,40,0	1/1:1,33:34:93.21:1014,93,0	1/1:4,17:21:22.08:472,22,0	0/0:25,0:25:68.98:0,69,599	0/0:20,0:20:47.91:0,48,407	0/0:27,0:27:68.65:0,69,584	0/0:17,0:17:47.99:0,48,417	0/0:32,0:31:72.03:0,72,644	1/1:4,19:24:44.95:479,45,0	0/0:5,0:5:12:0,12,104
chr10	107168115	.	T	TA	1275.88	PASS	AB=1.000;AC=11;AF=0.212;AN=52;BaseQRankSum=-2.015;DP=184;FS=0.000;HRun=7;HaplotypeScore=29.1356;InbreedingCoeff=0.6263;MQ=84.95;MQ0=2;MQRankSum=-4.277;QD=20.25;ReadPosRankSum=-3.047;VQSLOD=1.6506;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:30.05:0,30,289	1/1:0,5:5:15.05:180,15,0	0/0:12,0:9:22.83:0,23,198	0/1:17,0:14:28.19:28,0,66	0/0:8,0:8:23.96:0,24,215	0/0:5,0:5:15.02:0,15,145	0/0:1,0:1:3:0,3,29	1/1:2,20:21:57.14:672,57,0	0/0:1,0:1:3:0,3,29	0/0:8,0:8:24.04:0,24,232	0/0:8,0:8:24.03:0,24,228	1/1:0,2:3:8.89:87,9,0	0/0:1,0:1:3:0,3,29	0/0:2,0:2:6.01:0,6,58	0/0:2,0:2:6.01:0,6,58	0/0:2,0:2:3:0,3,29	0/0:24,0:24:71.99:0,72,667	0/0:16,0:16:45.07:0,45,434	1/1:3,7:10:24.03:273,24,0	1/1:0,6:6:17.99:199,18,0	./.	0/0:3,0:3:9.01:0,9,87	0/0:4,0:4:12.02:0,12,116	0/0:2,0:2:6.01:0,6,58	0/0:4,0:4:12.02:0,12,116	0/0:7,0:7:21.03:0,21,203	./.	0/0:1,0:1:3:0,3,29
chr10	107168150	.	C	CT	623.81	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-1.008;DP=276;FS=5.709;HRun=9;HaplotypeScore=39.1610;InbreedingCoeff=0.7197;MQ=75.18;MQ0=6;MQRankSum=-3.189;QD=16.86;ReadPosRankSum=-1.838;VQSLOD=2.7887;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:32.96:0,33,281	0/0:8,0:8:24:0,24,208	0/0:28,0:15:22.03:0,22,186	0/0:20,0:15:13.88:0,14,119	0/0:17,0:17:44.98:0,45,389	0/0:7,0:7:18:0,18,155	0/0:7,0:6:18:0,18,156	1/1:10,4:13:21.01:216,21,0	0/0:1,0:1:3:0,3,26	0/0:11,0:11:29.99:0,30,260	0/0:11,0:12:29.02:0,29,237	0/0:9,0:9:19.81:0,20,146	0/0:2,0:2:6:0,6,52	0/0:6,0:6:15:0,15,130	0/0:6,0:6:8.99:0,9,78	0/0:2,0:2:3:0,3,26	0/0:32,0:31:77.95:0,78,676	0/0:24,0:23:68.99:0,69,598	1/1:7,5:11:4.01:259,4,0	1/1:0,6:6:18.05:199,18,0	1/1:0,2:2:3.01:33,3,0	0/0:7,0:7:17.99:0,18,156	0/0:6,0:6:18:0,18,156	0/0:4,0:4:12:0,12,104	0/0:5,0:5:12:0,12,104	0/0:8,0:8:21:0,21,182	1/1:0,3:2:6.02:66,6,0	0/0:1,0:1:3:0,3,26
chr10	107168244	.	CACAA	C	9069.43	PASS	AB=1.000;AC=51;AF=0.944;AN=54;BaseQRankSum=-3.496;DP=248;FS=0.000;HRun=0;HaplotypeScore=89.4776;InbreedingCoeff=0.4541;MQ=55.68;MQ0=6;MQRankSum=-3.820;QD=37.95;ReadPosRankSum=2.725;VQSLOD=4.9585;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:17:45.14:681,45,0	1/1:0,3:3:9.03:106,9,0	0/1:8,0:3:1.78:2,0,71	0/0:9,0:5:5.25:0,5,66	1/1:0,2:2:6.02:89,6,0	1/1:2,8:9:24.08:388,24,0	1/1:0,12:12:36.03:417,36,0	1/1:2,21:23:57.19:785,57,0	1/1:1,10:11:33.10:502,33,0	1/1:2,5:7:18.06:279,18,0	1/1:0,1:1:3:27,3,0	1/1:1,5:6:9.03:128,9,0	1/1:0,7:7:21.06:268,21,0	1/1:0,6:6:18.06:309,18,0	1/1:1,5:6:18.02:241,18,0	1/1:0,9:9:27.09:388,27,0	1/1:2,22:23:66.20:1070,66,0	1/1:1,17:18:51.13:791,51,0	1/1:3,14:16:39.13:617,39,0	./.	1/1:2,9:11:27.09:468,27,0	1/1:0,5:5:15.05:236,15,0	1/1:0,2:2:6.02:90,6,0	1/1:0,9:8:17.66:270,18,0	1/1:0,5:5:15.05:202,15,0	1/1:2,10:11:30.08:510,30,0	1/1:0,2:2:6.02:105,6,0	1/1:0,2:2:6.02:101,6,0
chr10	107168251	.	AG	A	4256.15	PASS	AB=1.000;AC=51;AF=0.944;AN=54;BaseQRankSum=-0.459;DP=249;FS=1.851;HRun=1;HaplotypeScore=97.5861;InbreedingCoeff=0.2985;MQ=62.04;MQ0=3;MQRankSum=-3.824;QD=17.73;ReadPosRankSum=1.230;VQSLOD=5.2349;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,2:19:52.67:343,53,0	1/1:3,0:3:8.28:47,8,0	0/1:6,0:5:23.42:23,0,26	0/0:9,0:6:4.35:0,4,106	1/1:2,1:3:5.91:41,6,0	1/1:9,1:10:27.15:181,27,0	1/1:12,0:12:35.20:215,35,0	1/1:23,0:23:60.01:400,60,0	1/1:10,0:10:29.69:210,30,0	1/1:5,2:7:19.91:135,20,0	1/1:1,0:1:2.90:16,3,0	1/1:6,0:6:9.76:61,10,0	1/1:9,0:9:26.15:169,26,0	1/1:6,2:8:20.38:144,20,0	1/1:6,0:6:15.69:101,16,0	1/1:9,0:9:26.61:178,27,0	1/1:27,0:25:63.08:449,63,0	1/1:17,0:17:47.59:340,48,0	1/1:16,0:15:42.59:302,43,0	./.	1/1:10,0:10:26.84:199,27,0	1/1:5,0:5:14.83:104,15,0	1/1:2,0:2:5.92:40,6,0	1/1:10,0:9:20.69:140,21,0	1/1:6,0:6:17.73:117,18,0	1/1:10,0:10:29.74:212,30,0	1/1:2,0:2:5.98:46,6,0	1/1:2,0:2:5.97:45,6,0
chr10	107168252	.	G	GGA	11004.26	PASS	AB=0.875;AC=53;AF=0.946;AN=56;BaseQRankSum=-4.122;DP=270;FS=0.000;HRun=0;HaplotypeScore=81.1177;InbreedingCoeff=0.3739;MQ=62.26;MQ0=3;MQRankSum=-3.265;QD=42.16;ReadPosRankSum=1.354;VQSLOD=6.0308;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:19:54.18:854,54,0	1/1:0,3:3:9.03:108,9,0	0/1:6,0:6:38.20:38,0,39	0/0:9,0:6:11.95:0,12,128	1/1:2,2:4:9.03:144,9,0	1/1:3,8:11:33.11:571,33,0	1/1:1,12:13:36.07:446,36,0	1/1:4,24:28:75.25:1127,75,0	1/1:1,10:11:33.11:540,33,0	1/1:3,5:8:24.08:391,24,0	1/1:1,1:2:6.01:81,6,0	1/1:1,5:6:12.04:191,12,0	1/1:2,7:9:27.07:374,27,0	1/1:2,6:8:21.07:376,21,0	1/1:0,6:6:18.06:293,18,0	1/1:0,9:9:27.09:397,27,0	1/1:1,26:25:66.22:1120,66,0	1/1:1,17:18:51.17:827,51,0	1/1:7,14:20:54.18:891,54,0	1/1:1,0:1:3.01:54,3,0	1/1:1,9:10:27.09:478,27,0	1/1:0,5:5:15.05:241,15,0	1/1:0,2:2:6.02:92,6,0	1/1:2,9:10:24.04:349,24,0	1/1:1,5:6:18.06:254,18,0	1/1:1,10:11:33.10:577,33,0	1/1:0,1:2:6.02:86,6,0	1/1:0,2:2:6.02:103,6,0
chr10	107168890	.	GT	G	201.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.762;DP=629;FS=0.000;HRun=1;HaplotypeScore=67.0881;InbreedingCoeff=0.7959;MQ=56.45;MQ0=19;MQRankSum=-0.992;QD=22.34;ReadPosRankSum=0.500;VQSLOD=3.5236;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.29:0,84,1340	1/1:0,9:9:21.07:293,21,0	0/0:26,0:7:20.94:0,21,298	0/0:24,0:2:6.02:0,6,94	0/0:14,0:14:42.14:0,42,667	0/0:9,0:9:27.09:0,27,431	0/0:39,0:38:99:0,114,1725	0/0:28,0:24:69.23:0,69,1096	0/0:21,0:21:63.21:0,63,1004	0/0:19,0:17:51.17:0,51,796	0/0:4,0:4:12.04:0,12,192	0/0:31,0:30:90.27:0,90,1399	0/0:21,0:21:63.21:0,63,1007	0/0:26,0:26:78.21:0,78,1173	0/0:25,0:25:75.24:0,75,1175	0/0:33,0:33:96.33:0,96,1534	0/0:36,0:36:99:0,108,1682	0/0:28,0:28:84.25:0,84,1312	0/0:13,0:8:24.08:0,24,384	0/0:15,0:15:39.12:0,39,600	0/0:53,0:50:99:0,141,2211	0/0:24,0:24:72.25:0,72,1150	0/0:13,0:13:39.13:0,39,621	0/0:35,0:35:99:0,99,1556	0/0:18,0:17:48.13:0,48,740	0/0:20,0:20:60.20:0,60,959	0/0:12,0:12:36.12:0,36,575	0/0:2,0:2:6.02:0,6,96
chr10	107169520	.	T	TG	432.17	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.564;DP=475;FS=7.010;HRun=0;HaplotypeScore=47.4869;InbreedingCoeff=0.9422;MQ=67.90;MQ0=1;MQRankSum=0.080;QD=22.75;ReadPosRankSum=0.913;VQSLOD=4.8598;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1330	1/1:5,0:3:7.70:40,8,0	0/0:16,0:8:18.03:0,18,231	0/0:19,0:11:17.41:0,17,257	0/0:28,0:28:78.18:0,78,1034	0/0:11,0:10:27.08:0,27,362	0/0:15,0:15:45.10:0,45,591	0/0:24,0:24:66.20:0,66,892	0/0:9,0:9:27.05:0,27,327	0/0:20,0:20:60.14:0,60,788	0/0:25,0:24:66.17:0,66,870	1/1:0,14:14:33.11:505,33,0	0/0:8,0:8:24.08:0,24,335	0/0:13,0:13:33.11:0,33,461	0/0:6,0:6:18.05:0,18,235	0/0:9,0:8:24.08:0,24,335	0/0:28,0:28:81.22:0,81,1079	0/0:31,0:31:93.22:0,93,1238	0/0:21,0:21:63.21:0,63,879	0/0:28,0:28:84.20:0,84,1131	0/0:9,0:9:27.09:0,27,377	0/0:13,0:13:39.13:0,39,544	0/0:12,0:12:36.12:0,36,503	0/0:12,0:12:36.12:0,36,503	0/0:13,0:12:30.32:0,30,425	0/0:25,0:25:72.23:0,72,972	0/0:11,0:11:33.11:0,33,461	0/0:17,0:17:51.17:0,51,713
chr10	107169836	.	TA	T	36.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.151;DP=559;FS=3.883;HRun=7;HaplotypeScore=59.4151;InbreedingCoeff=0.8260;MQ=81.73;MQ0=0;MQRankSum=-2.081;QD=6.08;ReadPosRankSum=0.488;VQSLOD=-0.1127;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.23:0,72,905	0/0:5,0:7:11.45:0,11,62	0/0:14,0:14:4.97:0,5,254	0/0:17,0:17:34.39:0,34,473	0/0:26,0:26:72.23:0,72,905	0/0:20,0:20:60.19:0,60,754	0/0:18,0:18:51.16:0,51,642	0/0:37,0:37:96.24:0,96,1176	0/0:10,0:10:30.10:0,30,377	0/0:28,0:28:75.24:0,75,943	0/0:22,0:22:63.20:0,63,791	1/1:1,5:6:12.02:122,12,0	0/0:18,0:18:51.15:0,51,629	0/0:18,0:18:51.16:0,51,642	0/0:35,0:35:99:0,99,1217	0/0:14,0:14:39.12:0,39,491	0/0:40,0:40:99:0,114,1391	0/0:22,0:22:63.20:0,63,792	0/0:17,0:17:51.15:0,51,618	0/0:21,0:21:57.18:0,57,717	0/0:16,0:16:45.13:0,45,553	0/0:14,0:14:36.12:0,36,453	0/0:16,0:16:48.15:0,48,591	0/0:29,0:29:87.28:0,87,1093	0/0:16,0:16:36.10:0,36,436	0/0:22,0:22:66.21:0,66,830	0/0:22,0:22:66.21:0,66,830	0/0:7,0:7:21.07:0,21,264
chr10	107170016	.	G	GT	90.70	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.176;DP=464;FS=4.286;HRun=0;HaplotypeScore=55.8046;InbreedingCoeff=0.8602;MQ=79.71;MQ0=0;MQRankSum=-2.198;QD=18.14;ReadPosRankSum=-1.538;VQSLOD=5.2442;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.18:0,84,1066	0/0:3,0:3:6.02:0,6,69	0/0:17,0:17:31.75:0,32,444	0/0:10,0:10:20.07:0,20,234	0/0:11,0:11:33.11:0,33,461	0/0:16,0:16:48.14:0,48,639	0/0:25,0:25:75.21:0,75,996	0/0:32,0:32:96.30:0,96,1297	0/0:26,0:26:78.26:0,78,1090	0/0:14,0:14:39.11:0,39,512	0/0:8,0:8:21.07:0,21,273	1/1:0,4:5:11.87:176,12,0	0/0:14,0:14:39.12:0,39,528	0/0:10,0:10:30.10:0,30,418	0/0:13,0:13:36.11:0,36,488	0/0:11,0:11:33.09:0,33,431	0/0:35,0:35:99:0,105,1415	0/0:29,0:29:87.20:0,87,1128	0/0:12,0:12:35.95:0,36,426	0/0:13,0:13:33.11:0,33,460	0/0:32,0:32:96.29:0,96,1289	0/0:11,0:11:33.11:0,33,458	0/0:7,0:7:21.07:0,21,294	0/0:29,0:29:81.15:0,81,1039	0/0:11,0:11:33.11:0,33,461	0/0:12,0:12:36.11:0,36,487	0/0:16,0:16:48.16:0,48,670	0/0:14,0:14:42.12:0,42,554
chr10	107170170	.	GC	G	77.76	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.679;DP=549;FS=4.187;HRun=2;HaplotypeScore=63.2376;InbreedingCoeff=0.8314;MQ=86.44;MQ0=0;MQRankSum=-5.612;QD=5.55;ReadPosRankSum=1.858;VQSLOD=0.9585;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1596	1/1:0,4:4:11.85:79,12,0	0/0:20,0:20:57:0,57,777	0/0:17,0:17:36.99:0,37,501	0/0:15,0:15:42.14:0,42,624	0/0:14,0:14:39.13:0,39,585	0/0:25,0:25:75.25:0,75,1122	0/0:34,0:34:99:0,102,1527	0/0:34,0:34:99:0,102,1516	0/0:21,0:21:63.20:0,63,924	0/0:16,0:16:48.16:0,48,719	1/1:3,7:10:0.38:99,0,0	0/0:11,0:11:33.11:0,33,495	0/0:15,0:15:45.13:0,45,650	0/0:20,0:20:60.19:0,60,880	0/0:13,0:13:39.13:0,39,585	0/0:36,0:36:99:0,108,1600	0/0:19,0:19:57.19:0,57,841	0/0:19,0:19:57.19:0,57,854	0/0:11,0:11:33.11:0,33,492	0/0:29,0:29:81.27:0,81,1212	0/0:17,0:17:51.16:0,51,737	0/0:14,0:14:42.14:0,42,613	0/0:39,0:39:99:0,117,1750	0/0:8,0:8:21.07:0,21,315	0/0:24,0:24:72.24:0,72,1079	0/0:13,0:13:39.13:0,39,584	0/0:15,0:15:45.15:0,45,674
chr10	107170173	.	TCGCC	T	345.21	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.928;DP=561;FS=4.290;HRun=0;HaplotypeScore=97.1353;InbreedingCoeff=0.9811;MQ=84.04;MQ0=0;MQRankSum=-5.824;QD=28.77;ReadPosRankSum=1.616;VQSLOD=3.5344;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,3131	1/1:0,4:4:12.04:173,12,0	0/0:19,0:19:51.17:0,51,1349	0/0:15,0:15:36.12:0,36,812	0/0:16,0:16:48.16:0,48,1355	0/0:15,0:15:45.15:0,45,1212	0/0:26,0:26:78.27:0,78,2202	0/0:34,0:34:99:0,102,2823	0/0:34,0:34:99:0,102,2700	0/0:21,0:21:63.22:0,63,1802	0/0:16,0:16:48.16:0,48,1390	1/1:1,7:8:21.54:287,22,0	0/0:11,0:11:33.11:0,33,954	0/0:16,0:16:45.15:0,45,1260	0/0:19,0:19:57.20:0,57,1655	0/0:13,0:13:39.13:0,39,1130	0/0:37,0:37:99:0,111,2991	0/0:19,0:19:51.17:0,51,1477	0/0:22,0:22:66.23:0,66,1763	0/0:11,0:11:33.11:0,33,951	0/0:33,0:33:99:0,99,2666	0/0:17,0:17:51.17:0,51,1411	0/0:16,0:16:48.16:0,48,1341	0/0:39,0:39:99:0,117,3340	0/0:9,0:9:27.08:0,27,643	0/0:24,0:24:72.25:0,72,2091	0/0:13,0:13:39.13:0,39,1128	0/0:17,0:17:51.15:0,51,1370
chr10	107170180	.	GAA	G	408.67	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.928;DP=562;FS=5.989;HRun=4;HaplotypeScore=73.3748;InbreedingCoeff=0.9812;MQ=81.63;MQ0=0;MQRankSum=-5.847;QD=34.06;ReadPosRankSum=1.671;VQSLOD=3.0461;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,2231	1/1:0,4:4:12.04:174,12,0	0/0:16,0:16:45.13:0,45,742	0/0:14,0:14:24.97:0,25,423	0/0:18,0:18:54.19:0,54,1000	0/0:17,0:17:51.17:0,51,955	0/0:26,0:26:78.25:0,78,1395	0/0:30,0:30:90.27:0,90,1544	0/0:29,0:29:87.25:0,87,1564	0/0:24,0:24:72.21:0,72,1288	0/0:17,0:17:48.15:0,48,841	1/1:0,8:8:24.08:350,24,0	0/0:12,0:12:36.12:0,36,659	0/0:15,0:15:45.15:0,45,801	0/0:18,0:18:54.17:0,54,980	0/0:14,0:14:39.12:0,39,669	0/0:34,0:34:99:0,102,1727	0/0:18,0:18:48.08:0,48,768	0/0:26,0:26:77.94:0,78,1338	0/0:12,0:12:33.11:0,33,618	0/0:31,0:31:90.29:0,90,1625	0/0:16,0:16:48.16:0,48,899	0/0:19,0:19:57.18:0,57,1036	0/0:39,0:39:99:0,117,2091	0/0:9,0:9:27.09:0,27,506	0/0:21,0:21:60.20:0,60,1092	0/0:18,0:18:51.16:0,51,896	0/0:16,0:16:48.16:0,48,898
chr10	107170444	.	C	CGTTCCTCCCCCCGGAGGGG	13857.46	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-1.211;DP=573;FS=4.508;HRun=0;HaplotypeScore=261.2268;InbreedingCoeff=0.9811;MQ=75.73;MQ0=0;MQRankSum=-11.995;QD=161.13;ReadPosRankSum=-0.102;VQSLOD=4.3012;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,5643	1/1:5,3:3:9.03:842,9,0	0/0:22,0:22:63.22:0,63,2840	0/0:9,0:9:27.09:0,27,1216	0/0:15,0:15:36.11:0,36,1700	0/0:20,0:20:60.21:0,60,2853	0/0:32,0:32:96.33:0,96,5143	1/1:19,0:19:51.17:2904,51,0	0/0:29,0:29:87.26:0,87,4255	0/0:14,0:14:42.14:0,42,2063	0/0:11,0:11:21.07:0,21,1155	1/1:2,6:12:23.93:2077,24,0	0/0:21,0:21:57.16:0,57,2817	0/0:20,0:20:57.20:0,57,2917	0/0:29,0:29:84.27:0,84,4162	0/0:19,0:19:57.20:0,57,2949	0/0:47,0:47:99:0,141,7054	0/0:36,0:36:99:0,105,5302	1/1:5,3:12:33.10:1850,33,0	1/1:3,1:4:12.04:561,12,0	1/1:8,2:15:24.08:1950,24,0	0/0:24,0:24:63.22:0,63,3170	0/0:14,0:14:39.12:0,39,1678	0/0:45,0:45:99:0,126,6641	0/0:10,0:10:21.07:0,21,1029	0/0:21,0:21:63.22:0,63,3118	1/1:7,8:16:42.14:3675,42,0	0/0:12,0:12:33.11:0,33,1738
chr10	107170628	.	A	ATGAGCCCACAGGACAAC	1185.74	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.444;DP=533;FS=1.732;HRun=0;HaplotypeScore=233.0844;InbreedingCoeff=0.9205;MQ=82.52;MQ0=0;MQRankSum=-3.758;QD=131.75;ReadPosRankSum=2.497;VQSLOD=3.7824;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,123,5530	0/0:4,0:4:12.04:0,12,615	0/0:15,0:15:38.34:0,38,1224	0/0:17,0:17:45.08:0,45,1454	0/0:16,0:16:48.16:0,48,2348	0/0:13,0:13:33.11:0,33,1527	0/0:31,0:31:93.23:0,93,3997	0/0:23,0:23:66.22:0,66,2742	0/0:30,0:30:69.24:0,69,3280	0/0:15,0:15:45.15:0,45,2072	0/0:7,0:7:21.07:0,21,1054	1/1:0,5:9:15.05:1274,15,0	0/0:16,0:16:39.61:0,40,1878	0/0:18,0:18:48.15:0,48,2008	0/0:23,0:23:54.14:0,54,2418	0/0:21,0:21:57.18:0,57,2663	0/0:27,0:26:78.27:0,78,3781	0/0:17,0:17:48.16:0,48,2269	0/0:25,0:25:72.24:0,72,3194	0/0:5,0:5:12.04:0,12,423	0/0:47,0:47:99:0,135,5899	0/0:10,0:10:30.10:0,30,1504	0/0:13,0:13:39.09:0,39,1478	0/0:27,0:27:78.27:0,78,3744	0/0:9,0:9:27.09:0,27,1384	0/0:17,0:17:45.15:0,45,2144	0/0:23,0:22:57.08:0,57,2520	0/0:10,0:10:30.10:0,30,1209
chr10	107170885	.	AAAATAAATGAATAAAT	A	2238.26	PASS	AC=8;AF=0.160;AN=50;BaseQRankSum=7.484;DP=241;FS=3.108;HRun=0;HaplotypeScore=106.5752;InbreedingCoeff=0.7418;MQ=54.98;MQ0=4;MQRankSum=-7.443;QD=65.83;ReadPosRankSum=0.509;VQSLOD=3.4802;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:39.07:0,39,1511	0/0:2,0:2:3.01:0,3,212	0/0:3,0:1:3.01:0,3,129	0/0:5,0:4:12.02:0,12,444	0/0:12,0:12:36.11:0,36,2098	0/0:10,0:10:24.08:0,24,1703	0/0:8,0:6:12:0,12,307	1/1:1,6:6:14.94:235,15,0	0/0:6,0:6:15.02:0,15,602	0/0:8,0:8:23.91:0,24,1348	0/0:4,0:4:9.02:0,9,473	./.	0/0:3,0:3:3.01:0,3,233	0/0:6,0:6:9.02:0,9,314	0/0:11,0:11:27.04:0,27,1158	0/0:2,0:2:3:0,3,25	0/0:38,0:37:72.15:0,72,5396	0/0:25,0:25:66.17:0,66,4018	1/1:5,4:8:18.04:590,18,0	1/1:1,5:6:15.05:661,15,0	./.	0/0:2,0:2:6.01:0,6,258	0/0:6,0:6:15.02:0,15,429	./.	0/0:14,0:14:39.11:0,39,2413	0/0:7,0:7:18.06:0,18,1318	1/1:5,7:10:21.07:900,21,0	0/0:15,0:15:33.09:0,33,2351
chr10	107170958	.	TTC	T	1252.80	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=9.142;DP=270;FS=1.471;HRun=0;HaplotypeScore=43.4551;InbreedingCoeff=0.7936;MQ=65.89;MQ0=3;MQRankSum=-3.353;QD=21.98;ReadPosRankSum=-1.274;VQSLOD=3.2777;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:36.12:0,36,594	0/0:3,0:3:6.02:0,6,102	0/0:13,0:7:18:0,18,222	0/1:12,0:6:0.58:1,0,143	0/0:14,0:14:42.06:0,42,678	0/0:9,0:9:24.06:0,24,379	0/0:7,0:7:17.93:0,18,240	1/1:0,8:8:20.97:246,21,0	0/0:8,0:8:21.07:0,21,341	0/0:15,0:15:44.84:0,45,670	0/0:6,0:5:15.05:0,15,254	1/1:0,8:6:12.04:181,12,0	0/0:2,0:2:6.02:0,6,102	0/0:1,0:1:3.01:0,3,51	0/0:9,0:9:23.98:0,24,320	0/0:7,0:7:17.88:0,18,304	0/0:27,0:27:78.15:0,78,1165	0/0:21,0:21:63.17:0,63,1011	1/1:3,5:8:21:268,21,0	1/1:2,7:9:23.91:261,24,0	1/1:1,1:2:3.01:45,3,0	0/0:3,0:2:6.02:0,6,102	0/0:3,0:3:9.03:0,9,152	0/0:17,0:17:48.16:0,48,812	0/0:8,0:8:24.03:0,24,364	0/0:12,0:12:33.08:0,33,506	1/1:1,9:10:30.06:425,30,0	0/0:13,0:13:39.10:0,39,592
chr10	107171119	.	GA	G	801.02	PASS	AB=0.773;AC=12;AF=0.222;AN=54;BaseQRankSum=3.796;DP=356;FS=8.911;HRun=12;HaplotypeScore=65.9912;InbreedingCoeff=0.5284;MQ=67.07;MQ0=9;MQRankSum=-2.446;QD=9.31;ReadPosRankSum=0.852;VQSLOD=2.1554;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,1:18:27.42:0,27,388	./.	0/0:35,0:13:16.77:0,17,134	0/0:29,0:14:11.65:0,12,82	0/0:10,1:11:23.97:0,24,221	0/0:10,1:12:6.81:0,7,242	0/1:6,1:7:5.20:5,0,134	1/1:5,10:14:37.89:283,38,0	0/0:8,0:8:10.57:0,11,96	0/0:15,0:15:27.01:0,27,259	0/0:9,0:9:18.04:0,18,183	1/1:5,5:9:20.91:162,21,0	0/0:6,0:9:20.87:0,21,192	0/0:8,0:10:17.66:0,18,149	0/0:11,0:11:20.89:0,21,187	0/0:9,0:9:23.95:0,24,217	0/0:31,1:31:82.01:0,82,738	0/0:10,0:10:27.05:0,27,273	0/1:8,6:15:22.89:98,0,23	1/1:4,5:7:14.94:116,15,0	0/1:4,2:6:9.23:37,0,9	0/1:5,2:8:25.65:26,0,102	0/0:2,0:2:3.01:0,3,30	0/0:16,0:17:34.70:0,35,317	0/0:5,0:5:9.02:0,9,91	0/0:13,0:13:33:0,33,315	1/1:5,9:13:32.43:242,32,0	0/0:12,1:15:12.74:0,13,274
chr10	107171154	.	A	AC	395.38	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=5.702;DP=357;FS=1.410;HRun=0;HaplotypeScore=58.5970;InbreedingCoeff=0.1360;MQ=55.03;MQ0=10;MQRankSum=-5.406;QD=4.03;ReadPosRankSum=2.284;VQSLOD=2.9011;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:38.29:0,38,362	0/0:2,0:2:6.02:0,6,81	0/1:19,0:5:2.60:3,0,70	0/0:25,0:7:12.39:0,12,89	0/0:10,0:10:21.83:0,22,212	0/0:16,0:16:39.52:0,40,406	0/0:5,0:5:15.01:0,15,156	0/1:30,0:29:49.33:49,0,258	0/0:5,0:4:8.45:0,8,48	0/0:16,0:15:32.30:0,32,374	0/0:3,0:3:8.95:0,9,68	1/1:6,10:17:30.62:373,31,0	0/0:6,0:6:12.02:0,12,134	0/0:8,0:8:6.30:0,6,94	0/0:15,0:14:22.79:0,23,224	0/0:8,0:7:7.41:0,7,134	0/0:20,0:20:42.06:0,42,401	0/0:15,0:15:42.35:0,42,447	0/1:13,0:13:34.09:34,0,105	0/1:4,0:3:3.22:3,0,51	0/0:8,1:9:17.79:0,18,128	0/0:3,0:3:5.95:0,6,42	0/0:1,0:1:2.98:0,3,21	0/0:16,0:16:27.98:0,28,256	0/0:12,0:12:27.05:0,27,324	0/0:16,0:15:43.20:0,43,392	0/1:14,0:13:57.92:58,0,133	0/0:28,0:27:57.17:0,57,661
chr10	107172268	.	CT	C	56.79	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.544;DP=548;FS=1.494;HRun=8;HaplotypeScore=71.9101;InbreedingCoeff=0.7318;MQ=62.99;MQ0=2;MQRankSum=-0.314;QD=6.31;ReadPosRankSum=-0.719;VQSLOD=0.4173;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,132,1582	1/1:2,7:9:15.01:145,15,0	0/0:25,1:20:21.95:0,22,500	0/0:23,0:17:27.02:0,27,281	0/0:26,0:26:63.19:0,63,759	0/0:23,0:23:69.19:0,69,811	0/0:29,0:29:63.19:0,63,759	0/0:16,0:15:8.80:0,9,54	0/0:18,0:18:42.94:0,43,572	0/0:29,0:29:81.23:0,81,958	0/0:10,0:10:30.09:0,30,361	0/0:10,0:7:5.87:0,6,36	0/0:13,0:13:36.09:0,36,422	0/0:14,0:14:42.12:0,42,497	0/0:23,0:23:66.19:0,66,787	0/0:19,0:19:51.16:0,51,616	0/0:38,0:38:99:0,105,1238	0/0:15,0:15:36.11:0,36,434	0/0:14,0:14:12.28:0,12,79	0/0:11,0:11:10.29:0,10,65	0/0:4,0:3:0:0,0,0	0/0:15,0:15:39.09:0,39,439	0/0:24,0:25:65.98:0,66,761	0/0:37,0:37:90.26:0,90,1070	0/0:16,0:16:48.14:0,48,567	0/0:17,0:17:33.09:0,33,389	0/0:10,0:10:14.46:0,14,96	0/0:9,0:9:27.08:0,27,325
chr10	107172289	.	TC	T	478.22	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=6.240;DP=482;FS=7.771;HRun=2;HaplotypeScore=49.5875;InbreedingCoeff=0.9141;MQ=58.67;MQ0=7;MQRankSum=-6.360;QD=17.71;ReadPosRankSum=-2.574;VQSLOD=2.3891;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,150,2018	0/0:5,0:5:9.03:0,9,127	0/0:12,0:8:9.56:0,10,136	0/0:13,0:7:7.22:0,7,108	0/0:26,0:26:72.16:0,72,941	0/0:26,0:26:78.25:0,78,1085	0/0:27,0:27:54.03:0,54,676	1/1:4,8:7:18.02:213,18,0	0/0:19,0:19:54.14:0,54,711	0/0:22,0:22:63.13:0,63,820	0/0:10,0:10:30.08:0,30,389	./.	0/0:12,0:12:36.09:0,36,472	0/0:12,0:12:36.12:0,36,504	0/0:21,0:21:57.11:0,57,731	0/0:19,0:19:57.18:0,57,788	0/0:37,0:37:99:0,111,1472	0/0:16,0:16:48.15:0,48,660	1/1:0,5:5:15:162,15,0	1/1:0,5:5:12.04:153,12,0	./.	0/0:15,0:15:39.11:0,39,517	0/0:18,0:18:48.15:0,48,651	0/0:35,0:35:99:0,102,1328	0/0:17,0:17:42.10:0,42,542	0/0:14,0:13:30.03:0,30,355	1/1:0,5:5:9:98,9,0	0/0:11,0:11:30:0,30,327
chr10	107172990	.	G	GT	207.44	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.074;DP=594;FS=1.179;HRun=9;HaplotypeScore=61.5275;InbreedingCoeff=0.9789;MQ=63.74;MQ0=0;MQRankSum=0.054;QD=18.86;ReadPosRankSum=-1.193;VQSLOD=3.4896;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:41:99:0,102,861	1/1:1,10:11:28.32:302,28,0	0/0:17,0:14:26.92:0,27,231	0/0:19,0:17:29.86:0,30,249	0/0:21,0:21:53.97:0,54,469	0/0:21,0:21:53.96:0,54,469	0/0:20,0:20:48.84:0,49,410	0/0:27,0:26:50.92:0,51,438	0/0:19,0:19:56.99:0,57,495	0/0:30,0:30:71.95:0,72,618	0/0:17,0:17:41.96:0,42,362	0/0:19,0:19:50.96:0,51,437	0/0:18,0:18:47.93:0,48,406	0/0:18,0:18:41.99:0,42,364	0/0:18,0:18:22.04:0,22,364	0/0:16,0:16:41.99:0,42,364	0/0:29,0:29:77.89:0,78,659	0/0:19,0:19:47.03:0,47,396	0/0:30,0:29:68.94:0,69,594	0/0:22,0:22:47.96:0,48,414	0/0:12,0:12:26.98:0,27,234	0/0:16,0:16:41.63:0,42,341	0/0:15,0:15:38.99:0,39,337	0/0:17,0:17:50.91:0,51,434	0/0:19,0:19:15.36:0,15,358	0/0:29,0:29:65.96:0,66,573	0/0:32,0:31:89.98:0,90,781	0/0:22,0:22:65.99:0,66,573
chr10	107173325	.	A	AGATAGAGACAGAGAGAGAACAAGG	24600.25	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.176;DP=655;FS=8.673;HRun=0;HaplotypeScore=381.6745;InbreedingCoeff=0.9994;MQ=76.03;MQ0=0;MQRankSum=-13.955;QD=186.37;ReadPosRankSum=-3.260;VQSLOD=3.2658;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,8093	0/0:9,0:9:27.09:0,27,1766	0/0:18,0:18:45.11:0,45,1590	0/0:22,0:22:63.21:0,63,2869	0/0:20,0:20:54.17:0,54,3123	0/0:21,0:21:63.22:0,63,3923	0/0:31,0:31:87.25:0,87,5111	1/1:33,0:32:87.29:6425,87,0	0/0:27,0:27:81.26:0,81,4432	0/0:24,0:24:72.24:0,72,3927	0/0:23,0:23:60.20:0,60,3590	1/1:12,6:18:48.16:4246,48,0	0/0:18,0:18:51.16:0,51,2602	0/0:19,0:19:54.17:0,54,2763	0/0:28,0:28:81.26:0,81,4354	0/0:25,0:25:69.23:0,69,4221	0/0:41,0:41:99:0,120,7037	0/0:20,0:20:51.17:0,51,2984	1/1:11,1:21:51.09:2152,51,0	1/1:11,7:19:54.19:5590,54,0	1/1:16,0:19:39.13:1971,39,0	0/0:20,0:20:60.21:0,60,3853	0/0:15,0:15:45.11:0,45,2679	0/0:33,0:33:99:0,99,5667	0/0:24,0:24:63.19:0,63,3211	0/0:31,0:31:90.29:0,90,5027	1/1:18,3:22:48.16:4217,48,0	0/0:8,0:8:24.08:0,24,1570
chr10	107173380	.	TTCCTCCAACAAGGCCACACC	T	940.46	PASS	AC=10;AF=0.200;AN=50;BaseQRankSum=5.508;DP=664;FS=0.000;HRun=0;HaplotypeScore=309.7058;InbreedingCoeff=0.8801;MQ=56.15;MQ0=16;MQRankSum=-2.251;QD=9.31;ReadPosRankSum=1.650;VQSLOD=1.4411;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:58.44:0,58,2421	0/0:7,0:7:6.02:0,6,138	./.	./.	0/0:18,0:17:12.04:0,12,523	0/0:19,0:19:24.06:0,24,1068	0/0:33,0:32:40.38:0,40,982	./.	0/0:24,0:24:33.11:0,33,1332	0/0:33,0:31:33.11:0,33,1354	0/0:21,0:21:24.08:0,24,967	1/1:9,0:9:6.02:215,6,0	0/0:16,0:16:30.09:0,30,1433	0/0:32,0:31:54.19:0,54,2378	0/0:25,0:24:30.06:0,30,1227	0/0:22,0:22:24.08:0,24,1038	0/0:44,0:44:60.21:0,60,2473	0/0:22,0:22:36.10:0,36,1416	1/1:21,4:21:11.91:142,12,0	1/1:8,10:18:8.99:92,9,0	1/1:39,0:38:21.77:359,22,0	0/0:16,0:16:15.03:0,15,220	0/0:16,0:16:18.06:0,18,789	0/0:44,0:43:69.24:0,69,3241	0/0:30,0:30:42.13:0,42,1610	0/0:26,0:25:21.06:0,21,855	1/1:10,0:10:12.04:288,12,0	0/0:7,0:7:6.02:0,6,443
chr10	107174426	.	GTGAGCCACCATGTGGTTGC	G	726.61	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=3.784;DP=567;FS=2.296;HRun=0;HaplotypeScore=144.2801;InbreedingCoeff=0.8402;MQ=33.72;MQ0=80;MQRankSum=-1.542;QD=90.83;ReadPosRankSum=1.330;VQSLOD=3.3572;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:19:25.33:0,25,2013	1/1:3,5:7:15.05:815,15,0	./.	./.	0/0:15,0:11:18.06:0,18,1451	0/0:23,0:17:24.08:0,24,1927	0/0:21,0:15:36.12:0,36,2927	0/0:23,0:17:48.13:0,48,3123	0/0:32,0:23:36.11:0,36,2681	0/0:21,0:18:54.17:0,54,4335	0/0:11,0:9:15.05:0,15,869	0/0:14,0:11:30.10:0,30,2528	0/0:20,0:20:33.11:0,33,2950	0/0:18,0:12:26.74:0,27,2126	0/0:24,0:13:15.05:0,15,1043	0/0:18,0:11:15.05:0,15,1324	0/0:47,0:30:24.08:0,24,1837	0/0:35,0:18:14.92:0,15,1283	0/0:19,0:15:42.06:0,42,2753	0/0:14,0:10:21.02:0,21,1281	0/0:32,0:18:27.09:0,27,2032	0/0:17,0:14:9.03:0,9,772	0/0:16,0:11:24.05:0,24,1696	0/0:24,0:17:27.09:0,27,2402	0/0:16,0:12:15.01:0,15,873	0/0:17,0:11:30.10:0,30,2550	0/0:23,0:20:36.08:0,36,2133	0/0:24,0:15:20.66:0,21,1118
chr10	107175999	.	C	CTCATCTTCGGG	3048.25	PASS	AB=0.821;AC=8;AF=0.143;AN=56;BaseQRankSum=8.691;DP=398;FS=1.793;HRun=0;HaplotypeScore=181.7696;InbreedingCoeff=0.0988;MQ=65.00;MQ0=0;MQRankSum=-8.476;QD=24.58;ReadPosRankSum=-0.363;VQSLOD=3.1628;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:76.44:0,76,2463	0/1:14,0:14:99:479,0,215	0/0:4,0:4:9.49:0,9,136	0/0:6,0:6:8.05:0,8,119	0/0:14,0:13:30.09:0,30,846	0/0:24,0:24:57.19:0,57,1891	0/0:28,0:28:81.24:0,81,2766	0/1:21,0:21:99:218,0,728	0/0:5,0:5:15.05:0,15,559	0/0:11,0:11:30.05:0,30,936	0/0:8,0:8:18.06:0,18,518	1/1:15,0:17:19.74:978,20,0	0/0:12,0:12:36.12:0,36,1299	0/0:9,0:9:27.09:0,27,925	0/0:6,0:6:18.06:0,18,641	0/0:14,0:14:39.08:0,39,1281	0/0:29,0:29:84.29:0,84,2962	0/0:24,0:24:69.24:0,69,2503	0/1:13,1:26:99:936,0,332	0/1:6,0:14:99:163,0,226	0/1:17,0:17:76.12:76,0,594	0/0:11,0:11:33.07:0,33,974	0/0:6,0:6:18.06:0,18,561	0/0:6,0:6:18.06:0,18,671	0/0:9,0:9:27.02:0,27,912	0/0:15,0:15:42.10:0,42,1356	0/1:6,0:15:99:340,0,339	0/0:3,0:3:9.03:0,9,315
chr10	107176328	.	T	TAGC	6958.28	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-8.945;DP=614;FS=4.079;HRun=0;HaplotypeScore=81.7400;InbreedingCoeff=0.9999;MQ=71.21;MQ0=0;MQRankSum=-2.065;QD=48.66;ReadPosRankSum=-1.623;VQSLOD=6.3244;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.29:0,84,1343	1/1:1,14:15:45.15:976,45,0	0/0:16,0:16:48.16:0,48,755	0/0:19,0:19:54.13:0,54,787	0/0:25,0:24:60.20:0,60,964	0/0:20,0:20:54.18:0,54,868	0/0:15,0:15:42.13:0,42,652	1/1:8,11:20:36.11:725,36,0	0/0:25,0:25:69.22:0,69,1086	0/0:32,0:32:90.31:0,90,1446	0/0:25,0:25:69.24:0,69,1109	1/1:0,16:16:48.16:1045,48,0	0/0:19,0:19:51.17:0,51,820	0/0:25,0:25:69.22:0,69,1085	0/0:21,0:21:63.21:0,63,1013	0/0:16,0:16:45.15:0,45,723	0/0:28,0:28:84.27:0,84,1327	0/0:33,0:33:90.26:0,90,1406	1/1:7,15:20:42.11:853,42,0	1/1:4,14:18:39.13:847,39,0	1/1:5,23:28:60.21:1321,60,0	0/0:21,0:21:63.21:0,63,1013	0/0:12,0:12:33.09:0,33,484	0/0:22,0:22:63.21:0,63,1013	0/0:18,0:18:48.16:0,48,772	0/0:32,0:32:90.31:0,90,1447	1/1:2,22:24:54.19:1191,54,0	0/0:17,0:17:51.17:0,51,820
chr10	107176435	.	ACTTT	A	4210.43	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.441;DP=572;FS=3.909;HRun=0;HaplotypeScore=92.8742;InbreedingCoeff=0.9996;MQ=66.13;MQ0=1;MQRankSum=-6.900;QD=42.96;ReadPosRankSum=-1.759;VQSLOD=4.8622;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,3221	0/0:12,0:12:36.12:0,36,960	0/0:18,0:16:42.14:0,42,1024	0/0:11,0:11:27.71:0,28,728	0/0:26,0:26:72.25:0,72,1887	0/0:23,0:23:60.21:0,60,1602	0/0:21,0:21:60.19:0,60,1537	1/1:1,24:25:72.20:1281,72,0	0/0:22,0:22:63.20:0,63,1620	0/0:26,0:26:75.24:0,75,1942	0/0:22,0:22:57.11:0,57,1367	0/0:17,0:17:48.14:0,48,1170	0/0:15,0:15:39.12:0,39,985	0/0:15,0:15:45.15:0,45,1170	0/0:22,0:22:66.16:0,66,1525	0/0:18,0:18:51.18:0,51,1329	0/0:24,0:24:69.24:0,69,1835	0/0:18,0:18:54.16:0,54,1326	1/1:2,12:14:36.03:504,36,0	1/1:0,24:24:62.66:1015,63,0	1/1:2,13:15:33.11:613,33,0	0/0:15,0:15:45.15:0,45,1190	0/0:15,0:15:42.05:0,42,992	0/0:18,0:18:48.16:0,48,1261	0/0:22,0:21:66.22:0,66,1693	0/0:32,0:32:90.29:0,90,2251	1/1:0,20:20:44.83:797,45,0	0/0:20,0:20:60.18:0,60,1482
chr10	107176732	.	GAA	G	1023.99	PASS	AB=0.899;AC=12;AF=0.214;AN=56;BaseQRankSum=6.156;DP=554;FS=7.187;HRun=15;HaplotypeScore=68.9752;InbreedingCoeff=0.7825;MQ=57.98;MQ0=6;MQRankSum=1.554;QD=8.83;ReadPosRankSum=1.742;VQSLOD=1.3819;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:48:99:0,120,1445	0/0:5,0:10:18.07:0,18,77	0/1:12,0:6:20.28:20,0,25	0/1:11,1:5:7.63:20,0,8	0/0:19,0:21:53.84:0,54,653	0/0:16,1:19:21.08:0,21,452	0/0:17,0:20:41.59:0,42,497	1/1:10,11:22:20.63:225,21,0	0/0:27,0:27:60.06:0,60,701	0/0:29,0:31:54.09:0,54,650	0/0:20,2:23:15.56:0,16,405	0/0:16,0:14:20.94:0,21,200	0/0:10,0:11:30.02:0,30,343	0/0:10,0:11:29.43:0,29,298	0/0:23,0:22:51.11:0,51,631	0/0:14,0:14:37.39:0,37,428	0/0:25,0:26:60.10:0,60,731	0/0:32,0:32:84.69:0,85,1091	1/1:6,10:17:30.15:274,30,0	1/1:1,12:14:29.60:249,30,0	1/1:5,12:19:26.55:267,27,0	0/0:14,0:14:30.04:0,30,376	0/0:11,0:15:37.38:0,37,391	0/0:17,1:19:20.62:0,21,468	0/0:23,1:24:18.70:0,19,526	0/0:21,1:23:55.95:0,56,554	1/1:8,9:17:8.83:145,9,0	0/0:9,0:9:17.51:0,18,192
chr10	107176902	.	G	GGCTGGGTGCAT	2881.32	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.095;DP=575;FS=42.969;HRun=0;HaplotypeScore=189.7300;InbreedingCoeff=0.9713;MQ=84.49;MQ0=0;MQRankSum=-7.311;QD=110.82;ReadPosRankSum=1.214;VQSLOD=2.1210;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,150,4530	0/0:7,0:7:15.05:0,15,493	0/0:18,0:18:42.01:0,42,1161	0/0:19,0:19:50.97:0,51,1311	0/0:14,0:14:27.09:0,27,825	0/0:16,0:16:30.10:0,30,954	0/0:20,0:20:51.18:0,51,1709	0/0:30,0:30:75.24:0,75,2413	0/0:18,0:18:48.16:0,48,1564	0/0:26,0:26:57.19:0,57,1626	0/0:12,0:12:18.06:0,18,580	1/1:11,10:26:57.20:2976,57,0	0/0:19,0:19:48.13:0,48,1436	0/0:17,0:17:48.16:0,48,1516	0/0:20,0:20:51.17:0,51,1621	0/0:11,0:11:27.09:0,27,845	0/0:21,0:21:57.20:0,57,1863	0/0:23,0:23:63.22:0,63,2105	0/0:18,0:18:51.17:0,51,1633	0/0:13,0:13:30.10:0,30,966	0/0:35,0:35:90.31:0,90,2834	0/0:17,0:17:33.03:0,33,956	0/0:12,0:12:24.08:0,24,631	0/0:34,0:34:87.30:0,87,2898	0/0:17,0:17:39.12:0,39,1152	0/0:17,0:17:33.11:0,33,992	0/0:24,0:24:69.24:0,69,2204	0/0:12,0:12:36.12:0,36,1031
chr10	107180214	.	TA	T	3039.35	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=10.337;DP=633;FS=4.426;HRun=9;HaplotypeScore=68.1468;InbreedingCoeff=0.9064;MQ=69.81;MQ0=0;MQRankSum=2.512;QD=19.12;ReadPosRankSum=-1.299;VQSLOD=3.6274;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,1:36:81.19:0,81,898	1/1:0,10:10:30.02:275,30,0	0/0:17,0:17:21.62:0,22,306	0/1:21,0:20:10.63:11,0,306	0/0:18,0:18:45.12:0,45,509	0/0:20,0:20:54.13:0,54,602	0/0:27,0:27:78.18:0,78,866	1/1:2,35:37:99:950,105,0	0/0:26,0:26:60.13:0,60,661	0/0:30,0:30:81.24:0,81,934	0/0:22,0:22:63.18:0,63,719	0/0:19,0:19:51.15:0,51,589	0/0:19,0:19:57.15:0,57,647	0/0:14,0:14:33.09:0,33,371	0/0:20,0:20:48.14:0,48,554	0/0:22,0:22:54.04:0,54,594	0/0:23,0:23:63.18:0,63,718	0/0:20,0:20:39.12:0,39,450	1/1:4,15:19:44.46:373,44,0	1/1:6,20:26:39.82:468,40,0	1/1:0,16:16:39.02:357,39,0	0/0:19,0:19:51.14:0,51,579	0/0:12,0:12:27.07:0,27,303	0/0:27,0:27:69.16:0,69,766	0/0:29,0:29:78.22:0,78,892	0/0:37,0:37:99:0,99,1123	1/1:1,29:30:87.05:796,87,0	0/0:17,0:17:42.12:0,42,483
chr10	107181502	.	AT	A	4758.09	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=11.845;DP=692;FS=8.678;HRun=1;HaplotypeScore=65.3953;InbreedingCoeff=0.8879;MQ=68.29;MQ0=1;MQRankSum=-0.688;QD=33.27;ReadPosRankSum=-2.134;VQSLOD=3.2079;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1641	0/1:10,0:10:19.34:55,0,19	0/0:14,0:12:32.85:0,33,362	0/0:12,0:10:29.46:0,29,310	0/0:23,0:23:69.19:0,69,944	0/0:23,0:23:69.22:0,69,968	0/0:31,0:31:93.28:0,93,1292	1/1:1,33:34:95.87:1274,96,0	0/0:34,0:34:99:0,99,1367	0/0:31,0:31:93.31:0,93,1329	0/0:22,0:22:66.19:0,66,903	0/0:20,0:20:60.08:0,60,807	0/0:20,0:20:60.20:0,60,857	0/0:25,0:25:75.19:0,75,1012	0/0:25,0:25:75.20:0,75,1015	0/0:23,0:23:69.22:0,69,968	0/0:39,0:39:99:0,117,1572	0/0:26,0:26:78.21:0,78,1088	1/1:0,15:15:45.08:557,45,0	1/1:3,31:34:47.29:1123,47,0	1/1:1,16:17:38.49:511,38,0	0/0:19,0:19:57.16:0,57,767	0/0:31,0:31:90.18:0,90,1182	0/0:27,0:27:81.27:0,81,1147	0/0:26,0:26:78.22:0,78,1060	0/0:30,0:30:90.26:0,90,1214	1/1:1,32:33:92.29:1239,92,0	0/0:9,0:9:27.09:0,27,386
chr10	107182238	.	GAC	G	324.41	PASS	AB=0.903;AC=15;AF=0.268;AN=56;BaseQRankSum=5.937;DP=609;FS=4.410;HRun=0;HaplotypeScore=77.6341;InbreedingCoeff=-0.3767;MQ=61.64;MQ0=5;MQRankSum=2.964;QD=0.96;ReadPosRankSum=2.081;VQSLOD=1.3757;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:41,2:43:2.15:2,0,851	0/0:7,0:8:9.02:0,9,103	0/1:36,1:18:16.46:16,0,173	0/0:27,0:16:6.02:0,6,92	0/1:16,2:19:32.23:32,0,381	0/1:22,1:23:7.12:7,0,320	0/1:24,2:27:36.84:37,0,509	0/0:34,0:33:51.14:0,51,635	0/1:15,2:17:26.24:26,0,507	0/0:26,0:25:42.09:0,42,576	0/0:12,0:12:27.09:0,27,410	0/0:22,0:23:48.13:0,48,691	0/0:23,2:25:7.93:0,8,541	0/0:18,0:18:24.08:0,24,370	0/0:18,1:19:1.90:0,2,435	0/1:19,3:22:38.29:38,0,339	0/1:29,3:33:36.41:36,0,735	0/1:17,2:21:42.50:42,0,568	0/0:16,0:14:12.04:0,12,156	0/0:18,0:18:6.02:0,6,75	0/0:26,0:25:9.01:0,9,107	0/1:11,1:12:7.11:7,0,320	0/1:13,1:14:10.11:10,0,296	0/1:22,4:26:73.60:74,0,675	0/1:8,4:12:99:116,0,118	0/1:16,1:17:10.13:10,0,277	0/0:19,0:18:15.03:0,15,179	0/1:12,1:13:17.01:17,0,172
chr10	107182416	.	CGTGTGTGTGTGT	C	979.25	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=4.196;DP=634;FS=2.261;HRun=0;HaplotypeScore=193.3321;InbreedingCoeff=0.7436;MQ=61.63;MQ0=15;MQRankSum=-5.928;QD=7.10;ReadPosRankSum=0.962;VQSLOD=2.8886;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:51.17:0,51,2046	1/1:4,3:6:6.02:207,6,0	./.	0/0:26,0:15:3.01:0,3,47	0/0:12,0:13:6.02:0,6,175	0/0:21,0:22:24.08:0,24,1030	0/0:36,0:37:44.16:0,44,1513	1/1:27,0:25:1.64:37,2,0	0/0:15,0:15:27.09:0,27,1075	0/0:19,0:19:27.09:0,27,689	0/0:18,0:18:21.07:0,21,753	0/0:16,0:18:20.99:0,21,535	0/0:22,0:22:36.12:0,36,1426	0/0:18,0:18:21.07:0,21,875	0/0:15,0:17:21.07:0,21,856	0/0:19,0:21:25.96:0,26,1008	0/0:28,0:33:60.37:0,60,2263	0/0:16,0:17:24.08:0,24,1105	0/0:15,0:13:1.55:0,2,4	1/1:7,2:9:6.02:177,6,0	1/1:51,23:67:2.87:90,3,0	0/0:14,0:14:27.09:0,27,1021	0/0:22,0:22:21.07:0,21,692	0/0:29,0:33:69.24:0,69,3173	0/0:13,0:15:15.05:0,15,659	0/0:22,0:22:30.98:0,31,1052	1/1:14,4:21:21.07:609,21,0	0/0:15,0:16:33.11:0,33,1287
chr10	107182525	.	AC	A	4428.42	PASS	AB=0.729;AC=40;AF=0.714;AN=56;BaseQRankSum=-13.464;DP=499;FS=4.633;HRun=11;HaplotypeScore=93.1546;InbreedingCoeff=0.7696;MQ=75.62;MQ0=0;MQRankSum=5.039;QD=13.06;ReadPosRankSum=2.900;VQSLOD=5.1011;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,16:24:35.92:295,36,0	0/0:8,0:8:19.87:0,20,105	0/1:14,2:16:42.57:43,0,117	0/0:25,0:22:6.42:0,6,178	1/1:7,11:18:29.90:242,30,0	1/1:5,9:14:27.27:221,27,0	1/1:6,10:17:21.43:174,21,0	0/0:23,0:23:48.09:0,48,256	1/1:6,6:12:20.63:171,21,0	1/1:4,9:13:26.86:208,27,0	1/1:3,9:13:18.96:129,19,0	1/1:9,8:18:31.97:252,32,0	1/1:4,10:15:21.82:159,22,0	1/1:10,11:21:32.93:270,33,0	1/1:4,6:10:20.96:170,21,0	1/1:5,11:17:28.99:227,29,0	1/1:13,21:35:50.92:609,51,0	1/1:2,8:10:26.92:221,27,0	0/0:25,0:25:47.26:0,47,247	0/0:24,0:24:53.82:0,54,273	0/0:38,0:38:61.58:0,62,305	1/1:6,3:9:8.96:74,9,0	1/1:5,11:16:27.43:220,27,0	1/1:5,18:23:44.93:368,45,0	1/1:6,2:8:2.97:24,3,0	1/1:10,9:19:29.90:245,30,0	0/0:16,0:15:37.65:0,38,191	0/1:3,6:9:13.90:104,0,14
chr10	107183111	.	GAT	G	4866.91	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.756;DP=594;FS=18.118;HRun=0;HaplotypeScore=75.0222;InbreedingCoeff=0.9988;MQ=78.46;MQ0=0;MQRankSum=-0.562;QD=38.63;ReadPosRankSum=-0.178;VQSLOD=4.9910;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,2199	1/1:0,9:9:24.08:344,24,0	0/0:13,0:13:32.47:0,32,582	0/0:18,0:18:54.09:0,54,880	0/0:14,0:14:39.12:0,39,664	0/0:19,0:18:51.17:0,51,919	0/0:35,0:35:96.33:0,96,1760	1/1:2,22:24:66.18:888,66,0	0/0:23,0:22:57.20:0,57,1045	0/0:18,0:18:51.17:0,51,929	0/0:9,0:9:27.08:0,27,465	0/0:27,0:27:72.25:0,72,1319	0/0:18,0:18:48.16:0,48,879	0/0:22,0:22:60.18:0,60,1057	0/0:23,0:23:66.23:0,66,1209	0/0:22,0:21:63.20:0,63,1125	0/0:33,0:33:90.31:0,90,1638	0/0:24,0:24:57.20:0,57,1045	1/1:0,14:14:42.13:583,42,0	1/1:1,20:21:60.20:860,60,0	1/1:1,36:37:99:1419,99,0	0/0:13,0:13:36.12:0,36,648	0/0:17,0:17:51.17:0,51,920	0/0:30,0:30:78.27:0,78,1430	0/0:11,0:11:24.08:0,24,440	0/0:22,0:22:66.23:0,66,1198	1/1:0,21:21:54.18:773,54,0	0/0:13,0:13:39.13:0,39,715
chr10	107183911	.	C	CT	5135.21	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-1.737;DP=649;FS=4.437;HRun=2;HaplotypeScore=70.6217;InbreedingCoeff=0.9993;MQ=83.02;MQ0=0;MQRankSum=-3.497;QD=37.48;ReadPosRankSum=-1.563;VQSLOD=4.8714;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,116,1378	1/1:1,9:10:24.08:342,24,0	0/0:22,0:22:58.12:0,58,717	0/0:22,0:22:31.29:0,31,564	0/0:22,0:22:63.18:0,63,765	0/0:22,0:22:63.14:0,63,728	0/0:35,0:35:99:0,102,1223	1/1:0,21:21:60.15:801,60,0	0/0:19,0:19:57.17:0,57,693	0/0:27,0:27:72.22:0,72,883	0/0:17,0:17:45.12:0,45,533	0/0:21,0:21:60.19:0,60,743	0/0:21,0:21:60.15:0,60,716	0/0:18,0:18:54.17:0,54,668	0/0:17,0:17:45.14:0,45,557	0/0:24,0:24:72.22:0,72,881	0/0:45,0:45:99:0,132,1580	0/0:21,0:21:63.18:0,63,765	1/1:2,14:16:42.08:565,42,0	1/1:1,16:17:51.17:719,51,0	1/1:2,46:48:99:1759,123,0	0/0:17,0:17:45.13:0,45,542	0/0:17,0:17:42.12:0,42,507	0/0:36,0:36:99:0,105,1269	0/0:15,0:15:39.02:0,39,460	0/0:23,0:23:63.17:0,63,751	1/1:1,24:25:69.20:949,69,0	0/0:9,0:9:27.08:0,27,334
chr10	107184001	.	TC	T	2501.36	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.033;DP=607;FS=18.171;HRun=1;HaplotypeScore=61.4287;InbreedingCoeff=0.9984;MQ=79.65;MQ0=0;MQRankSum=-0.180;QD=30.88;ReadPosRankSum=-4.348;VQSLOD=1.1966;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,1765	0/0:7,0:7:20.93:0,21,245	0/0:14,0:14:42.13:0,42,584	0/0:19,0:18:30.88:0,31,349	0/0:33,0:33:99:0,99,1393	0/0:20,0:20:54.13:0,54,715	0/0:35,0:35:99:0,105,1465	1/1:0,18:18:48.06:549,48,0	0/0:28,0:28:67.22:0,67,1121	0/0:27,0:27:81.25:0,81,1128	0/0:17,0:17:51.17:0,51,727	0/0:27,0:27:78.22:0,78,1060	0/0:23,0:23:69.21:0,69,966	0/0:22,0:22:66.17:0,66,902	0/0:22,0:22:66.21:0,66,925	0/0:26,0:26:78.22:0,78,1060	0/0:31,0:31:93.23:0,93,1233	0/0:19,0:19:54.12:0,54,715	1/1:0,17:17:45.06:538,45,0	1/1:0,17:17:50.91:580,51,0	1/1:1,11:12:35.99:437,36,0	0/0:15,0:15:45.14:0,45,624	0/0:20,0:20:57.17:0,57,796	0/0:19,0:19:57.18:0,57,797	0/0:19,0:19:57.19:0,57,812	0/0:32,0:32:96.27:0,96,1274	1/1:6,11:17:48.01:573,48,0	0/0:8,0:8:24.08:0,24,343
chr10	107184114	.	ACCT	A	2939.51	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.671;DP=458;FS=9.456;HRun=0;HaplotypeScore=73.7364;InbreedingCoeff=0.9907;MQ=84.93;MQ0=0;MQRankSum=-9.262;QD=48.99;ReadPosRankSum=-1.191;VQSLOD=4.7681;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,3479	1/1:0,5:5:15.05:279,15,0	0/0:10,0:10:29.13:0,29,625	0/0:26,0:26:68.95:0,69,1508	0/0:14,0:14:36.54:0,37,785	0/0:13,0:13:39.13:0,39,937	0/0:33,0:33:99:0,99,2418	1/1:0,6:6:18.06:335,18,0	0/0:18,0:18:54.19:0,54,1332	0/0:15,0:15:45.15:0,45,1109	0/0:10,0:10:30.10:0,30,737	0/0:18,0:18:54.19:0,54,1286	0/0:13,0:13:39.13:0,39,961	0/0:13,0:13:39.13:0,39,962	0/0:18,0:18:54.19:0,54,1331	0/0:18,0:18:54.19:0,54,1331	0/0:33,0:33:99:0,99,2365	0/0:15,0:15:45.15:0,45,1082	1/1:0,6:6:18.06:335,18,0	1/1:0,7:7:21.07:391,21,0	1/1:0,19:19:45.13:838,45,0	0/0:8,0:8:24.08:0,24,592	0/0:17,0:17:51.18:0,51,1257	0/0:24,0:24:72.25:0,72,1746	0/0:8,0:8:24.08:0,24,591	0/0:18,0:18:54.19:0,54,1337	1/1:0,17:17:51.17:947,51,0	0/0:7,0:7:21.07:0,21,518
chr10	107184219	.	G	GC	164.33	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=6.386;DP=429;FS=5.710;HRun=1;HaplotypeScore=59.0659;InbreedingCoeff=0.7633;MQ=78.01;MQ0=2;MQRankSum=-5.991;QD=5.87;ReadPosRankSum=-1.645;VQSLOD=-0.1736;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.29:0,96,1317	1/1:5,0:5:6.28:53,6,0	0/0:17,0:14:33.10:0,33,422	0/0:14,0:13:34.04:0,34,343	0/0:20,0:20:57.18:0,57,777	0/0:21,0:21:57.17:0,57,774	0/0:13,0:13:36.12:0,36,500	1/1:3,0:3:2.51:20,3,0	0/0:11,0:11:30.10:0,30,420	0/0:19,0:19:54.16:0,54,710	0/0:12,0:12:36.12:0,36,503	0/0:21,0:21:63.19:0,63,862	0/0:10,0:10:30.08:0,30,400	0/0:12,0:12:33.11:0,33,461	0/0:20,0:20:54.17:0,54,738	0/0:17,0:17:51.17:0,51,713	0/0:38,0:37:99:0,111,1507	0/0:19,0:18:54.18:0,54,755	0/1:2,0:2:1.91:3,0,2	1/1:5,7:12:20.88:156,21,0	0/1:2,0:2:0:0,0,0	0/0:11,0:11:30.10:0,30,419	0/0:18,0:18:48.15:0,48,653	0/0:29,0:29:84.28:0,84,1171	0/0:17,0:17:51.15:0,51,693	0/0:26,0:26:78.25:0,78,1069	1/1:2,2:4:1.84:64,2,0	0/0:4,0:4:12.04:0,12,168
chr10	107184220	.	T	TCAC	321.76	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=6.293;DP=428;FS=4.014;HRun=0;HaplotypeScore=74.3328;InbreedingCoeff=0.8299;MQ=77.20;MQ0=2;MQRankSum=-6.288;QD=12.87;ReadPosRankSum=-0.262;VQSLOD=3.1454;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.32:0,96,1747	1/1:5,0:5:5.35:50,5,0	0/0:18,0:14:32.90:0,33,534	0/0:14,0:13:25.59:0,26,385	0/0:20,0:20:57.20:0,57,1050	0/0:21,0:21:60.19:0,60,1054	0/0:13,0:13:36.12:0,36,658	0/0:3,0:3:4.59:0,5,15	0/0:11,0:11:33.10:0,33,584	0/0:18,0:18:54.17:0,54,944	0/0:12,0:12:36.12:0,36,670	0/0:21,0:21:63.22:0,63,1141	0/0:10,0:10:30.10:0,30,551	0/0:11,0:11:33.11:0,33,615	0/0:19,0:19:57.18:0,57,1024	0/0:18,0:18:51.17:0,51,948	0/0:39,0:38:99:0,111,1952	0/0:19,0:18:57.17:0,57,1028	1/1:2,0:2:5.75:44,6,0	1/1:5,7:12:20.90:269,21,0	0/1:2,0:2:0:0,0,0	0/0:11,0:11:30.10:0,30,559	0/0:18,0:18:48.16:0,48,886	0/0:30,0:30:87.28:0,87,1576	0/0:16,0:16:48.16:0,48,895	0/0:25,0:25:75.26:0,75,1385	1/1:2,2:4:7.12:96,7,0	0/0:4,0:4:12.04:0,12,220
chr10	107184233	.	G	GCACA	1024.16	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=7.579;DP=462;FS=0.802;HRun=0;HaplotypeScore=94.1452;InbreedingCoeff=0.7779;MQ=63.64;MQ0=2;MQRankSum=-6.591;QD=14.63;ReadPosRankSum=-2.109;VQSLOD=2.5175;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:87.21:0,87,1388	1/1:4,0:6:9.50:161,10,0	0/1:17,0:8:20.72:21,0,46	0/0:11,0:8:4.56:0,5,55	0/0:22,0:22:63.19:0,63,1005	0/0:20,0:21:51.15:0,51,797	0/0:15,0:15:21.07:0,21,356	1/1:4,0:4:3.01:63,3,0	0/0:9,0:9:24.08:0,24,400	0/0:20,0:20:51.17:0,51,835	0/0:14,0:14:39.13:0,39,650	0/0:21,0:21:57.13:0,57,909	0/0:13,0:13:30.05:0,30,469	0/0:11,0:11:33.10:0,33,534	0/0:19,0:20:41.39:0,41,787	0/0:16,0:17:36.12:0,36,581	0/0:35,0:34:87.30:0,87,1448	0/0:18,0:17:45.09:0,45,698	1/1:11,0:9:15.04:210,15,0	1/1:13,6:18:21.07:460,21,0	1/1:6,0:6:3.01:48,3,0	0/0:12,0:12:27.09:0,27,458	0/0:21,0:21:48.16:0,48,800	0/0:29,0:29:75.24:0,75,1235	0/0:15,0:17:45.12:0,45,689	0/0:23,0:23:57.13:0,57,909	1/1:5,2:7:12.04:232,12,0	0/0:7,0:7:18.06:0,18,305
chr10	107184262	.	T	TA	621.42	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.057;DP=480;FS=5.479;HRun=9;HaplotypeScore=71.4124;InbreedingCoeff=0.9562;MQ=71.17;MQ0=3;MQRankSum=-10.625;QD=10.53;ReadPosRankSum=-5.715;VQSLOD=1.3052;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:80.91:0,81,691	1/1:1,5:6:17.98:183,18,0	0/0:23,0:14:14.27:0,14,82	0/0:16,0:7:10.53:0,11,93	0/0:26,0:26:58.17:0,58,509	0/0:20,0:20:47.97:0,48,412	0/0:12,0:12:32.99:0,33,286	1/1:12,0:12:31.42:163,31,0	0/0:8,0:8:17.97:0,18,154	0/0:20,0:20:56.98:0,57,493	0/0:25,0:25:68.93:0,69,586	0/0:19,0:19:50.93:0,51,432	0/0:12,0:12:26.99:0,27,234	0/0:13,0:13:35.95:0,36,305	0/0:20,0:20:56.97:0,57,488	0/0:11,0:11:32.98:0,33,282	0/0:33,0:33:95.90:0,96,816	0/0:17,0:17:47.98:0,48,415	1/1:6,0:6:14.24:71,14,0	1/1:18,0:18:42.88:229,43,0	1/1:3,0:3:5.68:28,6,0	0/0:9,0:9:23.99:0,24,208	0/0:19,0:19:53.98:0,54,466	0/0:26,0:26:68.98:0,69,596	0/0:26,0:26:77.94:0,78,665	0/0:24,0:24:56.97:0,57,491	1/1:13,0:10:25.60:128,26,0	0/0:11,0:11:29.98:0,30,260
chr10	107184271	.	A	AAATTT	4255.32	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-1.239;DP=477;FS=5.373;HRun=0;HaplotypeScore=94.4501;InbreedingCoeff=0.9623;MQ=71.63;MQ0=3;MQRankSum=-10.381;QD=80.29;ReadPosRankSum=-2.692;VQSLOD=6.2926;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.29:0,87,1703	0/0:7,0:7:15.79:0,16,111	0/0:18,0:12:18.81:0,19,187	0/0:15,0:8:16.62:0,17,168	0/0:26,0:26:78.24:0,78,1417	0/0:20,0:20:57.15:0,57,1063	0/0:11,0:11:33.11:0,33,686	1/1:0,15:15:45.15:1274,45,0	0/0:7,0:7:21.07:0,21,384	0/0:21,0:21:60.20:0,60,1195	0/0:26,0:26:75.21:0,75,1427	0/0:18,0:18:54.17:0,54,1002	0/0:9,0:9:27.09:0,27,561	0/0:14,0:14:39.11:0,39,749	0/0:19,0:19:57.19:0,57,1117	0/0:14,0:14:42.14:0,42,747	0/0:34,0:34:99:0,102,1945	0/0:20,0:20:60.20:0,60,1159	1/1:0,5:5:15.05:472,15,0	1/1:5,14:18:54.18:1476,54,0	1/1:0,2:2:6.02:189,6,0	0/0:9,0:9:27.09:0,27,539	0/0:19,0:19:57.19:0,57,1133	0/0:23,0:23:69.23:0,69,1404	0/0:28,0:28:81.26:0,81,1597	0/0:26,0:26:75.23:0,75,1397	1/1:0,11:9:27.09:844,27,0	0/0:10,0:10:30.10:0,30,624
chr10	107184322	.	CTGT	C	1951.19	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.228;DP=423;FS=9.582;HRun=0;HaplotypeScore=68.8433;InbreedingCoeff=0.9759;MQ=74.22;MQ0=0;MQRankSum=-7.474;QD=34.23;ReadPosRankSum=1.710;VQSLOD=3.5236;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.27:0,84,1781	1/1:0,8:8:24.08:380,24,0	0/0:12,0:12:30.52:0,31,487	0/0:14,0:13:36.02:0,36,713	0/0:26,0:26:75.25:0,75,1600	0/0:15,0:15:42.13:0,42,863	0/0:9,0:9:24.08:0,24,525	1/1:4,6:10:18.06:282,18,0	0/0:4,0:4:12.04:0,12,262	0/0:19,0:19:54.19:0,54,1181	0/0:24,0:24:57.20:0,57,1245	0/0:17,0:17:48.16:0,48,1038	0/0:9,0:9:24.07:0,24,485	0/0:17,0:17:42.14:0,42,918	0/0:18,0:18:54.19:0,54,1178	0/0:11,0:11:27.09:0,27,590	0/0:24,0:24:69.21:0,69,1465	0/0:20,0:20:57.20:0,57,1236	1/1:1,7:8:21.07:333,21,0	1/1:3,10:13:30.10:475,30,0	1/1:0,3:3:9.03:143,9,0	0/0:8,0:8:18.06:0,18,393	0/0:14,0:14:33.11:0,33,697	0/0:11,0:11:30.10:0,30,656	0/0:21,0:21:60.21:0,60,1310	0/0:29,0:29:87.30:0,87,1889	1/1:1,14:12:33.11:522,33,0	0/0:14,0:14:42.11:0,42,827
chr10	107185498	.	ACTGAAC	A	4647.61	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.680;DP=633;FS=65.280;HRun=0;HaplotypeScore=137.4646;InbreedingCoeff=0.9862;MQ=63.93;MQ0=2;MQRankSum=-12.525;QD=58.10;ReadPosRankSum=1.068;VQSLOD=2.5718;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,157,5460	0/0:11,0:11:33.11:0,33,1207	0/0:30,0:26:78.27:0,78,2578	0/0:25,0:25:75.26:0,75,2413	0/0:24,0:24:72.25:0,72,2599	0/0:30,0:30:87.30:0,87,3075	0/0:21,0:21:60.21:0,60,2074	1/1:3,17:20:51.13:1201,51,0	0/0:21,0:21:60.21:0,60,2179	0/0:23,0:23:69.24:0,69,2373	0/0:14,0:14:42.13:0,42,1426	0/0:29,0:29:87.27:0,87,2902	0/0:18,0:18:51.17:0,51,1799	0/0:18,0:18:51.16:0,51,1711	0/0:27,0:27:75.24:0,75,2583	0/0:16,0:16:48.15:0,48,1609	0/0:34,0:34:99:0,102,3651	0/0:24,0:24:69.24:0,69,2526	1/1:3,14:14:39.11:905,39,0	1/1:2,18:20:51.18:1248,51,0	1/1:2,3:5:9.03:221,9,0	0/0:21,0:21:63.22:0,63,2213	0/0:23,0:23:69.24:0,69,2527	0/0:29,0:29:87.30:0,87,2922	0/0:31,0:31:90.30:0,90,3167	0/0:20,0:20:60.20:0,60,2108	1/1:1,17:18:45.15:1073,45,0	0/0:11,0:11:33.11:0,33,1185
chr10	107185535	.	C	CTTGTTTGT	6429.55	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.110;DP=690;FS=7.397;HRun=0;HaplotypeScore=201.3296;InbreedingCoeff=0.9910;MQ=69.08;MQ0=0;MQRankSum=-11.781;QD=51.44;ReadPosRankSum=-4.642;VQSLOD=2.3998;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,141,3637	0/0:9,0:9:24.08:0,24,564	0/0:31,0:30:63.68:0,64,1406	0/0:29,0:29:28.50:0,29,1142	0/0:29,0:29:75.26:0,75,1967	0/0:28,0:28:66.22:0,66,1629	0/0:28,0:28:69.18:0,69,1674	1/1:28,4:29:30.07:942,30,0	0/0:16,0:16:39.13:0,39,1025	0/0:26,0:26:51.16:0,51,1214	0/0:21,0:21:48.16:0,48,1213	0/0:25,0:25:66.23:0,66,1640	0/0:17,0:17:45.13:0,45,1090	0/0:14,0:14:39.13:0,39,987	0/0:24,0:24:54.19:0,54,1365	0/0:22,0:22:54.19:0,54,1361	0/0:40,0:40:87.30:0,87,2250	0/0:20,0:20:42.14:0,42,1104	1/1:21,7:28:33.57:1275,34,0	1/1:17,10:27:60.20:2013,60,0	1/1:6,5:10:12.04:412,12,0	0/0:23,0:23:69.24:0,69,1787	0/0:24,0:24:57.20:0,57,1451	0/0:24,0:24:69.24:0,69,1745	0/0:25,0:25:60.18:0,60,1522	0/0:27,0:27:69.20:0,69,1606	1/1:15,12:27:51.08:1788,51,0	0/0:9,0:9:21.07:0,21,543
chr10	107185567	.	T	TACAACC	9153.99	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.491;DP=670;FS=10.394;HRun=0;HaplotypeScore=152.4107;InbreedingCoeff=0.9874;MQ=69.13;MQ0=0;MQRankSum=-14.519;QD=77.58;ReadPosRankSum=-0.740;VQSLOD=5.5253;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,2762	1/1:0,9:10:27.09:985,27,0	0/0:34,0:32:93.27:0,93,2019	0/0:18,0:18:48.08:0,48,1070	0/0:31,0:31:90.31:0,90,2178	0/0:27,0:27:81.26:0,81,1944	0/0:33,0:33:99:0,99,2304	1/1:12,15:25:60.21:2068,60,0	0/0:19,0:19:57.19:0,57,1348	0/0:20,0:20:57.19:0,57,1359	0/0:17,0:17:51.16:0,51,1148	0/0:30,0:30:90.27:0,90,2068	0/0:13,0:13:39.13:0,39,960	0/0:26,0:26:69.20:0,69,1588	0/0:29,0:29:84.29:0,84,2065	0/0:25,0:25:72.23:0,72,1724	0/0:38,0:38:99:0,114,2608	0/0:27,0:27:81.26:0,81,1882	1/1:10,7:17:45.12:1411,45,0	1/1:3,19:26:72.10:2124,72,0	1/1:4,3:11:8.98:238,9,0	0/0:25,0:25:75.25:0,75,1799	0/0:21,0:21:63.19:0,63,1499	0/0:29,0:29:81.20:0,81,1800	0/0:21,0:21:60.21:0,60,1474	0/0:21,0:21:54.19:0,54,1330	1/1:2,20:26:66.23:2328,66,0	0/0:8,0:8:24.05:0,24,464
chr10	107185816	.	CA	C	695.89	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.361;DP=540;FS=2.268;HRun=3;HaplotypeScore=59.2067;InbreedingCoeff=0.9822;MQ=78.07;MQ0=1;MQRankSum=-1.143;QD=8.92;ReadPosRankSum=-2.154;VQSLOD=0.3199;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1431	1/1:0,6:6:14.73:114,15,0	0/0:20,0:20:56.49:0,56,695	0/0:10,0:10:21.06:0,21,272	0/0:23,0:23:60.18:0,60,822	0/0:11,0:11:33.10:0,33,457	0/0:28,0:28:77.30:0,77,1047	1/1:3,9:12:17.81:140,18,0	0/0:24,0:24:66.21:0,66,923	0/0:26,0:25:72.09:0,72,929	0/0:13,0:13:30.09:0,30,413	0/0:28,0:28:84.23:0,84,1162	0/0:13,0:13:36.11:0,36,495	0/0:15,0:15:42.14:0,42,602	0/0:25,0:25:69.22:0,69,959	0/0:19,0:19:57.19:0,57,817	0/0:34,0:34:99:0,99,1364	0/0:29,0:29:81.20:0,81,1104	1/1:1,5:6:14.96:139,15,0	1/1:0,10:11:14.66:104,15,0	1/1:0,28:27:14.48:164,14,0	0/0:17,0:17:48.15:0,48,667	0/0:11,0:11:33.05:0,33,425	0/0:19,0:19:57.09:0,57,754	0/0:21,0:21:63.17:0,63,812	0/0:24,0:23:69.17:0,69,936	1/1:0,15:15:20.27:218,20,0	0/0:15,0:15:45.15:0,45,647
chr10	107186188	.	T	TAG	3032.07	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-6.657;DP=413;FS=7.701;HRun=0;HaplotypeScore=49.0752;InbreedingCoeff=0.9452;MQ=63.10;MQ0=1;MQRankSum=-6.721;QD=39.38;ReadPosRankSum=-1.062;VQSLOD=4.9017;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:78.25:0,78,1245	1/1:0,5:5:9.03:175,9,0	0/0:21,0:17:48.12:0,48,689	0/0:12,0:10:8.57:0,9,198	0/0:22,0:22:66.21:0,66,1048	0/0:25,0:25:66.21:0,66,1047	0/0:13,0:13:36.11:0,36,562	1/1:1,19:14:39.03:602,39,0	0/0:13,0:13:36.11:0,36,563	0/0:16,0:15:45.14:0,45,693	0/0:9,0:9:27.09:0,27,440	0/0:9,0:9:24.06:0,24,345	0/0:8,0:8:18.06:0,18,293	0/0:10,0:10:30.09:0,30,462	0/0:13,0:13:39.12:0,39,612	0/0:10,0:10:30.06:0,30,455	0/0:35,0:35:99:0,105,1678	0/0:24,0:24:57.17:0,57,902	1/1:3,13:15:36.56:677,37,0	1/1:0,18:18:51.18:1030,51,0	1/1:0,2:3:6.02:121,6,0	0/0:12,0:12:36.10:0,36,536	0/0:5,0:5:12.51:0,13,196	0/0:10,0:10:30.07:0,30,439	0/0:13,0:13:36.12:0,36,587	0/0:15,0:15:45.14:0,45,690	1/1:1,12:13:30.10:606,30,0	0/0:12,0:12:36.12:0,36,587
chr10	107186350	.	CA	C	1516.70	PASS	AB=0.786;AC=10;AF=0.185;AN=54;BaseQRankSum=7.018;DP=474;FS=8.125;HRun=25;HaplotypeScore=70.8049;InbreedingCoeff=0.8189;MQ=57.99;MQ0=35;MQRankSum=-4.859;QD=15.64;ReadPosRankSum=2.058;VQSLOD=3.2221;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:66.48:0,66,739	./.	0/0:30,0:13:31.64:0,32,284	0/0:26,0:9:22.29:0,22,172	0/0:22,0:18:33.77:0,34,374	0/0:15,0:15:25.41:0,25,345	0/0:20,0:18:33.22:0,33,370	1/1:7,22:28:28.17:632,28,0	0/0:7,0:7:13.69:0,14,99	0/0:15,0:13:23.56:0,24,283	0/0:14,0:14:15.05:0,15,198	0/0:9,0:8:15.52:0,16,196	0/0:10,0:9:17.03:0,17,175	0/1:13,0:12:1.47:1,0,76	0/0:17,0:16:24.15:0,24,262	0/0:14,0:12:28.95:0,29,281	0/0:27,0:24:29.43:0,29,370	0/0:14,0:13:29.87:0,30,356	1/1:4,18:18:49.93:515,50,0	1/1:6,7:11:26.89:264,27,0	1/1:2,3:6:6.07:42,6,0	0/0:9,0:8:17.47:0,17,149	0/0:17,0:15:30.25:0,30,289	0/0:12,0:12:18.90:0,19,208	0/0:16,0:13:24.06:0,24,283	0/0:30,0:28:61.54:0,62,678	0/1:3,9:11:0.30:218,0,0	0/0:14,0:13:26.73:0,27,283
chr10	107186805	.	GA	G	81.72	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.920;DP=577;FS=12.092;HRun=1;HaplotypeScore=55.8652;InbreedingCoeff=0.9684;MQ=91.62;MQ0=0;MQRankSum=-1.674;QD=20.43;ReadPosRankSum=0.261;VQSLOD=2.4189;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.27:0,96,1462	1/1:0,4:4:12.04:168,12,0	0/0:22,0:22:58.60:0,59,897	0/0:26,0:26:74.92:0,75,1080	0/0:14,0:14:42.12:0,42,645	0/0:23,0:23:69.21:0,69,1056	0/0:22,0:22:66.22:0,66,1044	0/0:30,0:30:90.28:0,90,1349	0/0:20,0:20:57.19:0,57,910	0/0:28,0:28:81.27:0,81,1274	0/0:21,0:21:57.13:0,57,864	0/0:19,0:19:57.17:0,57,865	0/0:17,0:17:51.16:0,51,791	0/0:19,0:19:57.19:0,57,911	0/0:20,0:19:60.19:0,60,934	0/0:14,0:14:42.13:0,42,648	0/0:30,0:30:90.25:0,90,1365	0/0:27,0:27:81.28:0,81,1284	0/0:18,0:18:54.18:0,54,863	0/0:24,0:24:60.20:0,60,959	0/0:19,0:20:47.44:0,47,827	0/0:18,0:18:51.16:0,51,791	0/0:19,0:19:57.19:0,57,910	0/0:14,0:14:39.13:0,39,614	0/0:15,0:15:45.13:0,45,692	0/0:29,0:29:84.29:0,84,1342	0/0:19,0:19:57.19:0,57,911	0/0:13,0:13:39.13:0,39,623
chr10	107187566	.	CCACA	C	1180.70	PASS	AB=0.924;AC=12;AF=0.214;AN=56;BaseQRankSum=4.567;DP=804;FS=23.651;HRun=0;HaplotypeScore=163.6092;InbreedingCoeff=0.5153;MQ=58.23;MQ0=9;MQRankSum=-3.606;QD=4.69;ReadPosRankSum=1.085;VQSLOD=0.9667;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:49:46.69:0,47,989	0/0:12,0:14:17.58:0,18,221	0/0:31,0:17:2.99:0,3,24	0/0:21,0:12:2.99:0,3,23	0/0:13,0:14:17.77:0,18,267	0/0:19,0:23:26.51:0,27,374	0/0:29,0:29:46.49:0,46,850	0/1:43,1:34:18.29:164,0,18	0/0:23,0:23:52.93:0,53,1007	0/0:30,0:31:41.35:0,41,788	0/0:8,0:8:11.83:0,12,160	0/0:26,0:35:28.49:0,28,293	0/0:31,0:32:51.10:0,51,848	0/0:26,0:26:50.68:0,51,950	0/0:33,0:34:41.49:0,41,755	0/0:36,0:34:56.76:0,57,1071	0/0:25,0:26:44.49:0,44,827	0/1:26,2:29:56.88:57,0,582	1/1:25,2:27:12:157,12,0	1/1:14,7:24:18.44:229,18,0	1/1:49,8:56:10.98:296,11,0	0/1:25,0:26:4.83:5,0,661	0/0:14,0:16:19.90:0,20,313	0/0:51,0:54:51.93:0,52,1394	0/0:19,0:20:15.04:0,15,310	0/0:25,0:24:23.49:0,23,576	1/1:18,5:24:31.31:419,31,0	0/1:14,1:17:20.81:21,0,355
chr10	107187627	.	T	TAC	2088.12	PASS	AB=0.862;AC=8;AF=0.143;AN=56;BaseQRankSum=10.268;DP=1053;FS=0.000;HRun=0;HaplotypeScore=179.8075;InbreedingCoeff=0.7274;MQ=48.99;MQ0=30;MQRankSum=-1.611;QD=9.28;ReadPosRankSum=-0.646;VQSLOD=3.2897;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:59:99:0,132,1792	0/0:13,0:13:30.10:0,30,399	0/0:38,0:9:21.07:0,21,270	0/0:42,0:7:11.99:0,12,139	0/0:30,0:30:68.62:0,69,842	0/0:23,0:23:38.74:0,39,489	0/0:48,0:48:99:0,99,1270	0/1:40,6:22:18.85:200,0,19	0/0:42,0:42:87.27:0,87,1124	0/0:34,0:33:73.65:0,74,918	0/0:14,0:14:33.08:0,33,408	0/0:52,0:51:77.53:0,78,1107	0/0:31,0:31:78.68:0,79,990	0/0:43,0:43:92.40:0,92,1155	0/0:49,0:49:99:0,110,1366	0/0:44,0:44:99:0,104,1278	0/0:43,0:43:99:0,114,1406	0/0:32,0:32:43.44:0,43,806	1/1:27,2:26:7.07:567,7,0	1/1:29,13:40:44.71:770,45,0	1/1:85,2:83:34.65:563,35,0	0/0:29,0:29:45.99:0,46,728	0/0:18,0:18:42.12:0,42,541	0/0:65,1:64:99:0,138,1715	0/0:28,0:28:59.54:0,60,730	0/0:28,0:28:69.99:0,70,865	0/1:17,4:21:3.52:136,0,4	0/0:19,0:18:51.14:0,51,652
chr10	107187647	.	TAC	T	1966.96	PASS	AB=0.829;AC=8;AF=0.143;AN=56;BaseQRankSum=11.480;DP=1028;FS=0.979;HRun=0;HaplotypeScore=160.1891;InbreedingCoeff=0.6325;MQ=49.83;MQ0=35;MQRankSum=-4.616;QD=8.90;ReadPosRankSum=0.441;VQSLOD=3.3524;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:57:99:0,141,2230	0/0:15,0:15:33.58:0,34,537	0/0:24,0:4:9.03:0,9,125	0/0:30,0:4:3.01:0,3,42	0/0:33,0:33:75.20:0,75,1198	0/0:22,0:22:47.86:0,48,754	0/0:46,0:46:99:0,108,1792	0/1:33,8:29:99:462,0,325	0/0:43,0:43:89.78:0,90,1428	0/0:33,0:31:72.23:0,72,1171	0/0:18,0:18:45.15:0,45,751	0/0:52,0:51:99:0,114,1824	0/0:31,0:31:87.30:0,87,1460	0/0:40,0:40:96.98:0,97,1520	0/0:54,0:53:99:0,120,2018	0/0:36,0:36:96.31:0,96,1621	0/0:38,0:38:87.62:0,88,1548	0/0:35,0:35:41.28:0,41,1178	0/1:27,8:27:99:523,0,152	1/1:25,13:36:9.16:507,9,0	1/1:83,3:82:36.10:445,36,0	0/0:30,0:30:78.21:0,78,1206	0/0:20,0:20:54.17:0,54,862	0/0:57,0:56:99:0,120,1971	0/0:30,0:30:66.21:0,66,1059	0/0:41,0:41:99:0,108,1758	1/1:14,5:19:13.47:177,13,0	0/0:20,0:20:60.20:0,60,967
chr10	107187697	.	CATAT	C	1036.16	PASS	AB=0.925;AC=5;AF=0.089;AN=56;BaseQRankSum=8.530;DP=1045;FS=10.806;HRun=0;HaplotypeScore=169.9981;InbreedingCoeff=0.3423;MQ=53.25;MQ0=17;MQRankSum=-9.736;QD=8.29;ReadPosRankSum=-2.157;VQSLOD=1.9190;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:53:99:0,144,3442	0/0:9,0:9:21.05:0,21,527	0/0:59,0:18:45.06:0,45,925	0/0:66,0:26:44.86:0,45,1169	0/0:33,0:33:96.28:0,96,2272	0/0:27,0:26:54.07:0,54,1715	0/0:42,0:42:95.70:0,96,2130	0/1:46,6:40:99:620,0,219	0/0:39,0:39:99:0,105,2701	0/0:33,0:33:93.30:0,93,2372	0/0:17,0:17:51.14:0,51,1297	0/0:56,0:55:99:0,156,3925	0/0:36,0:36:99:0,105,2592	0/0:42,0:42:99:0,117,2994	0/0:55,0:55:99:0,144,3453	0/0:41,0:41:99:0,117,2818	0/0:36,1:37:88.07:0,88,2616	0/0:26,0:26:72.15:0,72,1677	0/1:19,0:16:46.81:252,0,47	0/0:29,0:30:15.72:0,16,119	0/1:31,4:34:12.08:12,0,57	0/0:31,0:31:93.31:0,93,2458	0/0:23,0:23:69.20:0,69,1760	0/0:56,0:55:99:0,144,3502	0/0:33,0:33:93.27:0,93,2215	0/0:54,0:54:99:0,159,3752	1/1:18,0:18:24.07:274,24,0	0/0:22,0:22:60.19:0,60,1486
chr10	107187699	.	TATAC	T	1516.38	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.767;DP=1028;FS=11.466;HRun=0;HaplotypeScore=165.5680;InbreedingCoeff=0.9081;MQ=53.43;MQ0=16;MQRankSum=-9.252;QD=10.46;ReadPosRankSum=-3.570;VQSLOD=1.7992;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:54:99:0,123,3031	0/0:9,0:9:18.06:0,18,462	0/0:57,0:18:34:0,34,794	0/0:62,0:26:29.04:0,29,1039	0/0:32,0:32:90.31:0,90,2164	0/0:26,0:25:53.48:0,53,1577	0/0:40,0:40:74.90:0,75,1820	1/1:41,4:34:15.87:711,16,0	0/0:39,0:39:99:0,99,2435	0/0:31,0:31:87.30:0,87,2179	0/0:17,0:17:45.15:0,45,1128	0/0:57,0:55:99:0,138,3468	0/0:35,0:35:96.33:0,96,2367	0/0:42,0:42:99:0,108,2604	0/0:53,0:53:99:0,126,3090	0/0:41,0:41:99:0,108,2561	0/0:40,0:40:73.36:0,73,2430	0/0:26,0:26:69.24:0,69,1608	1/1:9,10:17:30.07:471,30,0	1/1:9,20:29:2.99:23,3,0	1/1:24,9:32:3.01:48,3,0	0/0:31,0:31:93.32:0,93,2326	0/0:22,0:22:63.22:0,63,1606	0/0:57,0:56:99:0,132,3232	0/0:33,0:33:81.28:0,81,1990	0/0:55,0:55:99:0,138,3429	1/1:4,14:18:24.08:421,24,0	0/0:22,0:22:57.19:0,57,1334
chr10	107187707	.	CAT	C	247.89	PASS	AB=0.991;AC=7;AF=0.125;AN=56;BaseQRankSum=9.564;DP=1050;FS=10.624;HRun=0;HaplotypeScore=145.2692;InbreedingCoeff=0.3856;MQ=53.63;MQ0=13;MQRankSum=-8.602;QD=1.60;ReadPosRankSum=-3.832;VQSLOD=0.6942;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,129,2422	0/0:9,0:9:24.54:0,25,414	0/0:55,0:20:20.04:0,20,742	0/0:65,0:25:55.38:0,55,960	0/0:33,0:33:99:0,99,1827	0/0:29,0:28:71.95:0,72,1317	0/0:43,0:43:99:0,99,1768	1/1:32,1:25:9.22:210,9,0	0/0:39,0:39:99:0,102,1856	0/0:35,0:34:99:0,99,1835	0/0:18,0:18:54.18:0,54,1017	0/0:56,0:54:99:0,147,2755	0/0:38,0:38:99:0,111,2046	0/0:40,1:41:99:0,111,2061	0/0:52,0:52:99:0,138,2588	0/0:40,1:41:99:0,120,2124	0/0:47,0:47:99:0,126,2321	0/0:26,0:26:75.21:0,75,1385	0/1:26,0:23:55.50:56,0,98	0/1:37,1:38:17.58:18,0,34	1/1:36,0:34:2.02:7,2,0	0/0:35,0:35:94.31:0,94,1861	0/0:23,0:23:69.24:0,69,1310	0/0:57,0:56:99:0,144,2706	0/0:28,0:28:81.26:0,81,1514	0/0:53,1:54:99:0,156,2903	0/1:22,0:22:46.27:80,0,46	0/0:23,0:23:62.98:0,63,1031
chr10	107187726	.	ACACAC	A	1950.73	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.651;DP=1120;FS=3.985;HRun=0;HaplotypeScore=201.0181;InbreedingCoeff=0.9432;MQ=54.23;MQ0=22;MQRankSum=-8.472;QD=14.03;ReadPosRankSum=-6.399;VQSLOD=1.6044;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,122,3525	0/0:12,0:12:32.98:0,33,925	0/0:63,0:22:50.84:0,51,922	0/0:68,0:29:59.76:0,60,1371	0/0:33,0:33:90.30:0,90,2655	0/0:30,0:29:80.82:0,81,2211	0/0:48,0:48:99:0,114,3132	1/1:47,4:37:63.89:721,64,0	0/0:42,0:42:99:0,111,3017	0/0:37,0:36:93.27:0,93,2483	0/0:18,0:18:51.17:0,51,1425	0/0:52,0:51:99:0,140,3589	0/0:36,0:36:99:0,99,2866	0/0:37,0:37:90.31:0,90,2652	0/0:49,0:49:99:0,120,3449	0/0:44,0:43:99:0,129,3785	0/0:47,0:47:99:0,110,3699	0/0:30,0:30:78.27:0,78,2231	1/1:22,3:22:28.14:464,28,0	1/1:14,20:33:11.88:186,12,0	0/0:55,8:54:0:0,0,1	0/0:37,0:37:99:0,108,3088	0/0:26,0:26:75.26:0,75,2194	0/0:58,0:57:99:0,141,4059	0/0:29,0:29:78.26:0,78,2260	0/0:54,0:54:99:0,144,4091	1/1:10,19:26:41.97:736,42,0	0/0:19,0:19:51.18:0,51,1567
chr10	107188919	.	TAC	T	449.52	PASS	AB=0.909;AC=18;AF=0.346;AN=52;BaseQRankSum=8.023;DP=720;FS=3.401;HRun=0;HaplotypeScore=96.2178;InbreedingCoeff=-0.0424;MQ=51.71;MQ0=31;MQRankSum=-3.481;QD=1.47;ReadPosRankSum=0.659;VQSLOD=1.9325;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,2:50:64.89:0,65,1321	./.	0/0:55,0:11:12.98:0,13,165	0/0:69,0:10:2.60:0,3,10	0/0:22,0:22:30.07:0,30,418	0/0:23,0:23:3.63:0,4,511	0/1:25,3:28:89.09:89,0,501	1/1:26,0:24:7.28:54,7,0	0/1:25,1:26:69.63:70,0,655	0/1:16,1:17:13.27:13,0,245	0/0:20,2:21:16.84:0,17,664	0/0:29,2:32:25.86:0,26,801	0/1:18,4:22:69.91:70,0,449	0/1:17,2:19:35.07:35,0,374	0/0:27,0:27:29.05:0,29,719	0/1:21,2:25:25.67:26,0,648	0/0:39,0:39:47.33:0,47,1145	0/1:18,2:21:17.50:17,0,611	1/1:14,0:14:17.60:86,18,0	./.	0/0:34,0:34:1.82:0,2,5	0/0:18,0:18:33.11:0,33,501	0/1:13,1:13:7.26:7,0,308	0/1:32,4:36:8.48:8,0,737	0/1:13,3:16:4.21:4,0,379	0/1:17,0:17:6.84:7,0,298	1/1:16,0:14:19.44:97,19,0	0/1:8,1:8:25.29:25,0,84
chr10	107188939	.	CA	C	1105.33	PASS	AB=0.678;AC=4;AF=0.071;AN=56;BaseQRankSum=7.151;DP=729;FS=1.252;HRun=1;HaplotypeScore=90.0447;InbreedingCoeff=-0.0416;MQ=53.20;MQ0=30;MQRankSum=-4.330;QD=11.64;ReadPosRankSum=-1.086;VQSLOD=1.4959;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:99:0,126,1828	0/0:5,0:5:3.01:0,3,38	0/0:54,0:16:42.19:0,42,532	0/0:67,0:12:26.77:0,27,321	0/0:18,0:18:51.16:0,51,726	0/0:23,0:23:58.98:0,59,825	0/0:30,0:30:82.52:0,83,1086	0/1:12,20:30:99:530,0,304	0/0:28,0:28:77.43:0,77,1058	0/0:22,0:22:59:0,59,783	0/0:26,0:25:65.02:0,65,961	0/0:31,0:31:83.07:0,83,1186	0/0:19,0:19:53.60:0,54,718	0/0:17,0:17:48.78:0,49,666	0/0:32,0:32:92.55:0,93,1301	0/0:25,0:25:67.32:0,67,974	0/0:42,0:42:99:0,116,1700	0/0:21,0:21:57.81:0,58,820	0/1:10,9:19:99:265,0,187	0/0:4,5:9:3.49:0,3,71	0/1:20,8:28:8.78:180,0,9	0/0:23,0:23:61.90:0,62,860	0/0:18,0:17:46.95:0,47,653	0/0:30,0:30:69.86:0,70,1024	0/0:19,0:19:46.97:0,47,663	0/0:21,0:21:59:0,59,808	0/1:7,9:15:99:239,0,147	0/0:5,0:4:10.85:0,11,138
chr10	107188942	.	ACACACAC	A	1624.78	PASS	AB=0.708;AC=9;AF=0.167;AN=54;BaseQRankSum=10.196;DP=718;FS=1.938;HRun=0;HaplotypeScore=158.3382;InbreedingCoeff=0.8243;MQ=54.38;MQ0=29;MQRankSum=-2.427;QD=16.75;ReadPosRankSum=-2.147;VQSLOD=2.7259;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:99:0,118,3753	./.	0/0:51,0:18:39:0,39,686	0/0:64,0:11:20.69:0,21,418	0/0:18,0:18:51.17:0,51,1545	0/0:21,0:22:57.18:0,57,1702	0/0:30,0:30:81.27:0,81,2119	1/1:26,6:30:45.37:530,45,0	0/0:29,0:29:81.28:0,81,2253	0/0:21,0:21:53.88:0,54,1251	0/0:26,0:25:66.15:0,66,2120	0/0:30,0:30:69.24:0,69,2279	0/0:21,0:21:60.20:0,60,1658	0/0:17,0:17:47.35:0,47,1202	0/0:32,0:32:81.75:0,82,2416	0/0:27,0:27:81.17:0,81,2335	0/0:42,0:42:99:0,111,3380	0/0:21,0:21:60.21:0,60,1931	1/1:12,6:18:42.96:658,43,0	1/1:4,5:9:4.72:16,5,0	1/1:19,2:21:4.31:37,4,0	0/0:23,0:23:61.01:0,61,1566	0/0:18,0:17:45.14:0,45,1390	0/0:30,0:30:66.21:0,66,2071	0/0:19,0:19:48.16:0,48,1422	0/0:21,0:20:50.84:0,51,1425	0/1:10,7:15:3.87:532,0,4	0/0:5,0:4:12.04:0,12,331
chr10	107188949	.	C	CCA	2093.18	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=2.132;DP=677;FS=2.376;HRun=0;HaplotypeScore=97.4619;InbreedingCoeff=0.9497;MQ=57.13;MQ0=19;MQRankSum=-1.843;QD=24.63;ReadPosRankSum=-2.312;VQSLOD=3.9388;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:99:0,102,1327	0/0:5,0:9:12.04:0,12,158	0/0:42,0:18:33.05:0,33,408	0/0:52,0:13:24.57:0,25,281	0/0:21,0:21:53.19:0,53,661	0/0:21,0:21:45.05:0,45,666	0/0:31,0:31:84.23:0,84,1044	1/1:24,0:24:66.22:980,66,0	0/0:30,0:30:78.23:0,78,990	0/0:20,0:20:45.05:0,45,542	0/0:27,0:26:54.55:0,55,729	0/0:27,0:27:70.43:0,70,865	0/0:20,0:20:54.16:0,54,672	0/0:16,0:16:36.07:0,36,420	0/0:30,0:30:84.26:0,84,1095	0/0:27,0:27:72.17:0,72,897	0/0:38,0:38:99:0,99,1290	0/0:22,0:22:61.07:0,61,767	1/1:20,0:20:56.86:712,57,0	1/1:9,0:9:9.03:132,9,0	1/1:3,13:16:6:73,6,0	0/0:22,0:22:54.10:0,54,650	0/0:19,0:18:48.15:0,48,616	0/0:26,0:27:60.18:0,60,773	0/0:18,0:18:42.13:0,42,539	0/0:19,0:18:51.17:0,51,676	1/1:16,0:15:38.53:362,39,0	0/0:6,0:5:15.04:0,15,186
chr10	107189919	.	GCA	G	39.61	PASS	AB=0.871;AC=11;AF=0.196;AN=56;BaseQRankSum=5.257;DP=499;FS=10.897;HRun=0;HaplotypeScore=67.5174;InbreedingCoeff=-0.2148;MQ=60.62;MQ0=3;MQRankSum=2.277;QD=0.22;ReadPosRankSum=0.690;VQSLOD=0.3043;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,5:54:0.28:0,0,1271	0/1:2,1:3:25.92:26,0,85	0/0:18,0:13:9.03:0,9,131	0/0:19,0:10:3:0,3,28	0/1:8,2:10:54.89:55,0,103	0/0:19,2:21:13.14:0,13,617	0/1:18,1:21:12.18:12,0,510	0/0:20,0:19:23.87:0,24,195	0/0:15,0:15:27.09:0,27,418	0/1:12,1:13:4.86:5,0,370	0/1:15,1:16:4.91:5,0,383	0/0:13,0:13:27.09:0,27,422	0/0:20,0:20:42.14:0,42,650	0/1:9,2:11:7.87:8,0,321	0/0:14,2:16:4.11:0,4,479	0/0:7,0:7:15.05:0,15,235	0/0:24,1:25:34.08:0,34,874	0/1:31,4:35:6.77:7,0,805	0/0:8,0:11:11.73:0,12,78	0/0:11,0:14:5.74:0,6,36	0/0:15,0:22:0:0,0,0	0/0:14,1:15:26.96:0,27,399	0/1:10,3:12:4.87:5,0,393	0/1:22,2:23:21.81:22,0,575	0/0:16,1:17:44.77:0,45,634	0/1:21,3:24:14.75:15,0,651	0/0:7,0:12:14.87:0,15,107	0/1:7,1:8:10.87:11,0,305
chr10	107190954	.	C	CAA	3080.07	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=10.860;DP=552;FS=8.844;HRun=8;HaplotypeScore=72.7693;InbreedingCoeff=0.9196;MQ=62.74;MQ0=10;MQRankSum=-3.282;QD=25.04;ReadPosRankSum=-4.334;VQSLOD=1.6275;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:38:90.17:0,90,1061	0/0:6,0:6:18.05:0,18,201	0/0:20,0:10:27.03:0,27,276	0/0:25,0:13:17.15:0,17,171	0/0:19,0:19:51.13:0,51,568	0/0:17,0:17:42.09:0,42,458	0/0:21,0:21:51.12:0,51,559	1/1:7,22:30:75.54:939,76,0	0/0:15,0:15:42.10:0,42,468	0/0:27,0:26:66.17:0,66,735	0/0:16,0:16:42.11:0,42,467	0/0:8,0:8:21.04:0,21,225	0/0:17,0:17:45.07:0,45,473	0/1:7,0:7:2.51:3,0,170	0/0:17,0:17:45.11:0,45,501	0/0:15,0:15:36.09:0,36,400	0/0:39,0:38:99:0,105,1145	0/0:22,0:22:54.09:0,54,591	1/1:6,9:14:36.11:534,36,0	1/1:5,18:22:45.55:657,46,0	1/1:4,21:24:45.11:655,45,0	0/0:11,0:11:30.08:0,30,334	0/0:8,0:8:21.06:0,21,233	0/0:33,0:33:90.23:0,90,1003	0/0:14,0:14:39.09:0,39,435	0/0:22,0:22:51.09:0,51,567	1/1:2,14:14:30.06:468,30,0	0/0:19,0:19:54.14:0,54,601
chr10	107190962	.	AC	A	1150.62	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.498;DP=540;FS=9.419;HRun=4;HaplotypeScore=69.9561;InbreedingCoeff=0.9915;MQ=64.62;MQ0=4;MQRankSum=-1.913;QD=10.37;ReadPosRankSum=-4.442;VQSLOD=-0.3765;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,1318	0/0:8,0:8:24.05:0,24,291	0/0:18,0:10:12.96:0,13,188	0/0:21,0:14:23.33:0,23,260	0/0:21,0:21:63:0,63,777	0/0:18,0:18:45.11:0,45,574	0/0:22,0:22:66.04:0,66,802	1/1:30,2:29:73.19:434,73,0	0/0:15,0:15:45.13:0,45,592	0/0:23,0:23:69.22:0,69,919	0/0:16,0:16:48.12:0,48,614	0/0:8,0:8:24.07:0,24,311	0/0:17,0:17:48.13:0,48,609	0/0:8,0:8:24.05:0,24,293	0/0:18,0:18:51.15:0,51,655	0/0:14,0:14:39.10:0,39,494	0/0:38,0:38:99:0,105,1362	0/0:21,0:21:57.11:0,57,730	1/1:11,3:13:36.17:192,36,0	1/1:20,0:19:45.75:238,46,0	1/1:25,1:23:46.63:269,47,0	0/0:11,0:11:33.09:0,33,430	0/0:11,0:11:24.04:0,24,277	0/0:33,0:33:93.29:0,93,1238	0/0:15,0:15:45.14:0,45,592	0/0:17,0:17:51.17:0,51,687	1/1:18,1:16:34.62:194,35,0	0/0:19,0:19:54.16:0,54,711
chr10	107191777	.	GA	G	493	PASS	AB=0.817;AC=12;AF=0.214;AN=56;BaseQRankSum=3.967;DP=456;FS=9.061;HRun=14;HaplotypeScore=56.8869;InbreedingCoeff=0.3595;MQ=55.94;MQ0=8;MQRankSum=1.211;QD=3.68;ReadPosRankSum=1.177;VQSLOD=-0.2061;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,4:30:5.20:0,5,416	0/0:6,0:6:8.98:0,9,76	0/0:9,0:7:12.83:0,13,85	0/0:7,0:1:2.74:0,3,12	0/1:12,2:14:24.90:25,0,70	0/0:16,0:16:26.98:0,27,242	0/0:16,0:19:31.30:0,31,337	1/1:6,13:17:29.61:202,30,0	0/0:15,1:16:6.40:0,6,194	0/0:12,4:14:3.25:0,3,218	0/0:12,3:15:0.43:0,0,143	0/0:21,1:21:15.43:0,15,277	0/0:15,0:15:32.88:0,33,275	0/0:16,0:16:24.03:0,24,223	0/0:14,0:12:20.91:0,21,173	0/0:17,0:18:32.84:0,33,282	0/0:20,2:22:11.99:0,12,409	0/0:16,1:18:24.24:0,24,338	0/1:5,8:11:4.09:120,0,4	0/1:7,7:15:2.24:102,0,2	1/1:7,10:17:11.82:82,12,0	0/1:12,2:14:8.07:8,0,204	0/0:14,0:15:29.86:0,30,261	0/0:22,0:22:45.34:0,45,397	0/1:8,0:8:1.19:1,0,118	0/0:17,0:20:35.82:0,36,308	1/1:7,4:10:13.85:88,14,0	0/1:17,3:20:19.90:20,0,241
chr10	107191837	.	A	AGTGTGTGTGT	1973.33	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-0.497;DP=534;FS=8.361;HRun=0;HaplotypeScore=158.3424;InbreedingCoeff=0.9010;MQ=67.57;MQ0=10;MQRankSum=-5.796;QD=23.78;ReadPosRankSum=-2.529;VQSLOD=1.9918;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:39.13:0,39,1085	0/0:11,0:11:21.07:0,21,493	0/0:49,0:20:16.59:0,17,277	0/0:46,0:20:12.19:0,12,396	0/0:20,0:20:39.57:0,40,876	0/0:14,0:14:27.08:0,27,721	0/0:17,0:16:42.14:0,42,1113	1/1:24,0:24:36.12:1134,36,0	0/0:17,0:17:41.97:0,42,1009	0/0:22,0:22:44.85:0,45,1049	0/0:16,0:17:30.01:0,30,612	0/0:20,0:20:47.80:0,48,1090	0/0:13,0:13:33.10:0,33,872	0/0:11,0:11:21.04:0,21,507	0/0:9,0:9:21.07:0,21,607	0/0:14,0:14:29.63:0,30,833	0/0:28,0:28:69.24:0,69,1829	0/0:17,0:17:14.71:0,15,1257	1/1:18,2:17:18.02:438,18,0	1/1:5,5:13:6.02:138,6,0	1/1:9,0:10:3.45:23,3,0	0/0:15,0:15:25.90:0,26,644	0/0:19,0:19:41.70:0,42,1118	0/0:19,0:20:51.18:0,51,1505	0/0:10,0:10:27.03:0,27,635	0/0:17,0:17:33.11:0,33,939	1/1:6,9:16:9.03:398,9,0	0/0:23,0:23:66.20:0,66,1825
chr10	107193345	.	ACC	A	3602.15	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.880;DP=631;FS=9.076;HRun=6;HaplotypeScore=80.4994;InbreedingCoeff=0.9956;MQ=65.41;MQ0=1;MQRankSum=-0.405;QD=30.02;ReadPosRankSum=0.961;VQSLOD=2.7614;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1514	0/0:5,0:5:15.05:0,15,262	0/0:30,0:28:61.33:0,61,963	0/0:19,0:14:31.55:0,32,465	0/0:22,0:22:66.19:0,66,1123	0/0:28,0:28:78.17:0,78,1269	0/0:26,0:26:58.68:0,59,915	1/1:4,24:28:72.12:865,72,0	0/0:17,0:17:45.11:0,45,673	0/0:23,0:23:66.20:0,66,1071	0/0:21,0:21:63.20:0,63,1072	0/0:26,0:26:64.77:0,65,1227	0/0:14,0:14:42.14:0,42,756	0/0:22,0:22:63.12:0,63,988	0/0:28,0:27:81.24:0,81,1361	0/0:31,0:31:89.46:0,89,1404	0/0:21,0:22:56.40:0,56,759	0/0:22,0:22:63.17:0,63,991	1/1:8,6:14:30.07:350,30,0	1/1:4,19:23:69.06:827,69,0	1/1:4,26:30:63.20:840,63,0	0/0:21,0:21:63.18:0,63,1042	0/0:8,0:8:23.90:0,24,364	0/0:35,0:36:99:0,102,1645	0/0:18,0:18:54.15:0,54,858	0/0:20,0:20:57.18:0,57,968	1/1:2,23:25:54.18:719,54,0	0/0:18,0:18:54.19:0,54,971
chr10	107193425	.	GA	G	2525.76	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.881;DP=653;FS=3.021;HRun=7;HaplotypeScore=81.7497;InbreedingCoeff=0.9930;MQ=87.42;MQ0=1;MQRankSum=-0.395;QD=23.83;ReadPosRankSum=-2.320;VQSLOD=2.8360;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:83.92:0,84,1012	0/0:7,0:7:21.05:0,21,251	0/0:60,0:41:77.06:0,77,639	0/0:55,0:33:34.62:0,35,489	0/0:35,0:35:93.25:0,93,1119	0/0:26,0:25:69.20:0,69,844	0/0:17,0:17:39.10:0,39,466	1/1:8,23:31:69.13:690,69,0	0/0:14,0:14:33.11:0,33,416	0/0:24,0:24:69.21:0,69,849	0/0:20,0:20:60.18:0,60,744	0/0:27,0:27:75.20:0,75,906	0/0:15,0:15:13.34:0,13,452	0/0:18,0:18:54.15:0,54,664	0/0:23,0:23:63.20:0,63,794	0/0:16,0:16:39.10:0,39,468	0/0:21,0:21:63.12:0,63,761	0/0:20,0:19:57.14:0,57,677	1/1:3,19:22:57.01:542,57,0	1/1:0,15:15:45.06:447,45,0	1/1:3,11:14:36.08:367,36,0	0/0:15,0:15:36.10:0,36,440	0/0:13,0:13:33.06:0,33,387	0/0:29,0:29:78.68:0,79,945	0/0:20,0:20:54.14:0,54,654	0/0:32,0:32:81.22:0,81,957	1/1:4,20:24:66.10:655,66,0	0/0:8,0:8:24.08:0,24,300
chr10	107193594	.	TTCACCG	T	4354.12	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.031;DP=514;FS=12.784;HRun=0;HaplotypeScore=108.5486;InbreedingCoeff=0.9948;MQ=73.69;MQ0=0;MQRankSum=-10.697;QD=56.55;ReadPosRankSum=-0.345;VQSLOD=4.5209;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.27:0,81,2851	0/0:11,0:11:33.11:0,33,1218	0/0:9,0:9:27.09:0,27,985	0/0:18,0:18:44.47:0,44,1426	0/0:13,0:13:39.09:0,39,1320	0/0:18,0:18:54.19:0,54,1892	0/0:29,0:29:87.29:0,87,3185	1/1:0,22:22:60.19:1457,60,0	0/0:17,0:17:51.18:0,51,1917	0/0:16,0:16:48.15:0,48,1577	0/0:12,0:12:36.09:0,36,1137	0/0:26,0:26:78.25:0,78,2582	0/0:16,0:16:48.13:0,48,1652	0/0:18,0:18:54.19:0,54,2009	0/0:23,0:23:69.22:0,69,2494	0/0:18,0:18:54.19:0,54,1922	0/0:26,0:26:78.27:0,78,2812	0/0:26,0:26:78.22:0,78,2841	1/1:0,15:15:42.12:990,42,0	1/1:0,8:8:15.05:383,15,0	1/1:0,17:17:20.45:527,20,0	0/0:14,0:14:42.13:0,42,1470	0/0:12,0:12:36.12:0,36,1335	0/0:24,0:24:72.24:0,72,2504	0/0:13,0:13:36.12:0,36,1354	0/0:25,0:25:75.25:0,75,2685	1/1:0,15:15:38.74:997,39,0	0/0:26,0:26:72.23:0,72,2563
chr10	107193889	.	T	TTCTC	1588.83	PASS	AB=0.952;AC=28;AF=0.583;AN=48;BaseQRankSum=3.597;DP=623;FS=4.575;HRun=0;HaplotypeScore=133.5191;InbreedingCoeff=0.2727;MQ=67.64;MQ0=14;MQRankSum=-3.077;QD=3.82;ReadPosRankSum=-2.623;VQSLOD=1.7875;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:30:3.01:42,3,0	0/1:8,0:8:0:0,0,0	./.	./.	0/0:19,2:21:3.01:0,3,43	0/0:19,0:19:18.05:0,18,245	0/0:26,0:25:15.05:0,15,224	1/1:51,0:51:25.46:299,25,0	1/1:12,8:20:3.01:70,3,0	0/0:24,0:25:20.54:0,21,270	0/1:16,0:17:7.74:8,0,63	1/1:25,0:25:5.95:65,6,0	1/1:13,5:20:2.83:68,3,0	1/1:12,7:20:3.01:70,3,0	1/1:21,0:21:3.01:69,3,0	0/0:16,0:16:21.02:0,21,243	0/1:23,1:23:67.32:88,0,67	0/1:17,1:17:21.28:182,0,21	1/1:30,0:29:11.63:166,12,0	0/1:19,0:17:0:1,0,0	./.	1/1:21,1:23:10.57:193,11,0	0/1:9,0:9:28.35:48,0,28	0/1:22,8:31:3.77:4,0,81	./.	0/1:19,0:18:15.81:16,0,107	1/1:26,0:26:21.07:354,21,0	0/0:29,0:28:18.06:0,18,263
chr10	107193933	.	CTGTGTGTGTGTG	C	2033.66	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=7.380;DP=565;FS=0.604;HRun=0;HaplotypeScore=179.3997;InbreedingCoeff=0.5839;MQ=50.06;MQ0=16;MQRankSum=-1.554;QD=20.75;ReadPosRankSum=-4.145;VQSLOD=1.2658;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:30:39.13:0,39,1902	0/0:8,0:9:18.53:0,19,442	0/0:10,0:5:15.05:0,15,772	0/0:7,0:5:15.05:0,15,669	0/0:14,0:13:24.08:0,24,996	0/0:21,0:21:30.11:0,30,1770	0/0:30,0:30:43.92:0,44,1998	1/1:14,26:39:74.90:1259,75,0	0/0:24,0:23:36.12:0,36,1703	0/0:27,0:25:72.16:0,72,3122	0/0:17,0:16:26.98:0,27,1193	0/0:5,0:24:5.89:0,6,261	0/0:19,0:19:27.09:0,27,1259	0/0:21,0:21:17.66:0,18,891	0/0:22,0:30:57.20:0,57,2770	0/0:17,0:17:39.13:0,39,1762	0/0:24,0:23:44.51:0,45,1877	0/0:19,0:19:42.14:0,42,1866	1/1:8,11:17:32.24:514,32,0	0/1:13,0:12:42.56:127,0,43	0/1:6,0:5:0.02:0,0,0	0/0:29,0:28:51.04:0,51,2493	0/0:14,0:14:33.01:0,33,1449	0/0:32,0:31:42:0,42,2063	0/0:11,0:11:27.09:0,27,1349	0/0:19,0:17:45.01:0,45,1894	0/1:20,0:20:99:268,0,397	0/0:14,0:13:30.10:0,30,1352
chr10	107194593	.	CA	C	910.67	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.338;DP=557;FS=0.782;HRun=1;HaplotypeScore=61.0589;InbreedingCoeff=0.9926;MQ=72.69;MQ0=0;MQRankSum=-2.048;QD=35.03;ReadPosRankSum=3.372;VQSLOD=3.7710;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1624	0/0:9,0:9:27.09:0,27,432	0/0:23,0:23:53.82:0,54,794	0/0:14,0:13:39:0,39,503	0/0:11,0:11:33.11:0,33,526	0/0:25,0:25:75.26:0,75,1195	0/0:25,0:25:75.24:0,75,1167	0/0:20,0:20:60.20:0,60,936	0/0:23,0:23:69.24:0,69,1103	0/0:18,0:18:54.18:0,54,843	0/0:14,0:14:42.13:0,42,647	1/1:0,26:26:72.24:1006,72,0	0/0:16,0:16:48.16:0,48,767	0/0:24,0:24:69.23:0,69,1085	0/0:17,0:17:51.17:0,51,810	0/0:27,0:27:81.26:0,81,1272	0/0:27,0:27:81.28:0,81,1288	0/0:26,0:26:78.27:0,78,1241	0/0:15,0:15:45.14:0,45,696	0/0:16,0:16:45.15:0,45,709	0/0:30,0:30:90.31:0,90,1434	0/0:16,0:16:45.15:0,45,699	0/0:8,0:8:24.08:0,24,384	0/0:31,0:31:93.32:0,93,1477	0/0:15,0:15:45.14:0,45,689	0/0:18,0:18:54.18:0,54,842	0/0:21,0:21:60.20:0,60,955	0/0:7,0:7:21.07:0,21,335
chr10	107196036	.	GGA	G	90.72	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.987;DP=660;FS=4.718;HRun=0;HaplotypeScore=77.3297;InbreedingCoeff=0.9675;MQ=87.10;MQ0=1;MQRankSum=-0.813;QD=15.12;ReadPosRankSum=-1.795;VQSLOD=3.0101;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,2495	1/1:0,6:5:12.04:177,12,0	0/0:27,0:27:69.13:0,69,1231	0/0:21,0:21:60.20:0,60,1067	0/0:17,0:17:48.16:0,48,871	0/0:21,0:21:63.20:0,63,1149	0/0:28,0:28:81.28:0,81,1517	0/0:21,0:21:60.21:0,60,1124	0/0:26,0:26:72.25:0,72,1344	0/0:24,0:24:72.25:0,72,1348	0/0:20,0:20:57.20:0,57,1067	0/0:30,0:30:90.29:0,90,1654	0/0:18,0:18:54.19:0,54,1004	0/0:22,0:22:66.23:0,66,1234	0/0:23,0:23:60.21:0,60,1113	0/0:23,0:23:69.24:0,69,1293	0/0:37,0:37:99:0,105,1942	0/0:19,0:19:57.20:0,57,1056	0/0:16,0:16:45.15:0,45,803	0/0:25,0:25:75.26:0,75,1392	0/0:49,0:49:99:0,141,2606	0/0:22,0:22:63.20:0,63,1148	0/0:10,0:10:27.09:0,27,505	0/0:20,0:20:60.21:0,60,1113	0/0:18,0:18:51.17:0,51,955	0/0:24,0:24:72.25:0,72,1349	0/0:32,0:32:96.33:0,96,1796	0/0:16,0:16:45.15:0,45,843
chr10	107197790	.	GGA	G	166.69	PASS	AB=0.960;AC=8;AF=0.143;AN=56;BaseQRankSum=8.082;DP=625;FS=0.000;HRun=0;HaplotypeScore=79.7741;InbreedingCoeff=0.2692;MQ=57.79;MQ0=16;MQRankSum=-4.136;QD=1.46;ReadPosRankSum=0.968;VQSLOD=1.5077;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:93.09:0,93,1382	0/0:5,0:5:2.50:0,2,24	0/0:47,0:17:24.05:0,24,305	0/0:59,0:9:6.49:0,6,88	0/0:21,1:21:39.10:0,39,565	0/0:18,0:18:42.14:0,42,602	0/0:19,0:18:9.05:0,9,593	0/0:21,0:21:2.96:0,3,20	0/0:20,0:20:45.62:0,46,693	0/0:19,0:19:7.93:0,8,581	0/1:13,1:13:6.09:6,0,390	1/1:21,0:21:30.70:146,31,0	0/0:19,0:19:45.11:0,45,682	0/1:17,2:19:38.90:39,0,365	0/0:33,0:33:75.25:0,75,1165	0/0:17,0:17:2.99:0,3,500	0/0:29,0:29:69.23:0,69,1045	0/0:26,2:28:11.90:0,12,647	0/1:19,0:19:25.20:25,0,32	0/0:14,0:14:2.99:0,3,24	0/1:24,0:24:15.29:23,0,15	0/0:14,0:14:27.09:0,27,420	0/0:6,0:6:15.05:0,15,235	0/0:26,0:26:37.16:0,37,923	0/0:14,0:15:17.59:0,18,306	0/0:18,0:18:19.40:0,19,660	1/1:17,0:17:10.29:66,10,0	0/0:14,0:14:7.41:0,7,318
chr10	107197795	.	GAGAGAGAGAGAGAGAA	G	1456.17	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=4.787;DP=650;FS=7.205;HRun=0;HaplotypeScore=223.2157;InbreedingCoeff=0.2668;MQ=55.50;MQ0=19;MQRankSum=-3.920;QD=15.01;ReadPosRankSum=0.533;VQSLOD=1.8256;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:96.16:0,96,5558	0/1:5,0:5:37.86:38,0,297	0/0:45,0:14:17.94:0,18,340	0/0:62,0:9:10.24:0,10,98	0/0:23,0:22:39.12:0,39,2503	0/0:22,0:22:53.26:0,53,2425	0/0:20,0:19:48.16:0,48,3082	0/1:23,0:23:41.74:42,0,1014	0/0:22,0:22:49.93:0,50,3331	0/0:21,0:21:27.27:0,27,3095	0/0:13,0:12:33.09:0,33,2023	1/1:5,15:20:33.11:1415,33,0	0/0:20,0:20:48.16:0,48,3099	0/0:18,0:18:41.31:0,41,2190	0/0:33,0:33:74.18:0,74,4429	0/0:24,0:24:60.16:0,60,3088	0/0:28,0:28:75.23:0,75,4782	0/0:28,0:28:60.18:0,60,3545	0/1:18,0:18:13.55:14,0,669	0/1:16,0:16:0:0,0,0	0/0:25,0:25:6.02:0,6,276	0/0:14,0:14:30.05:0,30,1473	0/0:7,0:7:18.04:0,18,747	0/0:25,0:25:63.22:0,63,4469	0/1:15,0:15:76.10:76,0,1769	0/0:21,0:21:60.19:0,60,3270	0/0:17,0:17:23.75:0,24,1284	0/0:15,0:15:30.10:0,30,1920
chr10	107197807	.	GAGAA	G	1812.84	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=7.572;DP=673;FS=10.298;HRun=0;HaplotypeScore=100.5239;InbreedingCoeff=0.7074;MQ=53.50;MQ0=23;MQRankSum=-2.018;QD=11.33;ReadPosRankSum=-2.946;VQSLOD=1.5503;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:51:99:0,109,1994	0/1:7,0:7:5.84:104,0,6	0/0:42,0:12:17.42:0,17,174	0/0:67,0:13:3.45:0,3,77	0/0:23,0:21:44.62:0,45,812	0/0:21,0:21:62.09:0,62,832	0/0:20,0:20:50.38:0,50,1068	1/1:27,0:27:63.13:478,63,0	0/0:22,0:22:35.65:0,36,1111	0/1:24,0:24:11.73:12,0,956	0/0:15,0:14:35.05:0,35,629	1/1:18,0:18:33.07:334,33,0	0/0:20,0:20:54.03:0,54,1187	0/0:15,0:15:44.23:0,44,712	0/0:35,0:35:89.97:0,90,1707	0/0:24,0:24:56.51:0,57,1046	0/0:30,0:30:81.14:0,81,1637	0/0:29,0:28:69.79:0,70,1201	1/1:6,14:19:47.91:460,48,0	1/1:2,19:21:2.58:24,3,0	1/1:4,22:25:3.48:57,3,0	0/0:10,0:10:30.04:0,30,539	0/0:12,0:12:29.63:0,30,396	0/0:29,0:28:78.05:0,78,1628	0/0:12,0:12:7.62:0,8,462	0/0:23,0:23:48.50:0,49,1014	1/1:16,1:17:47.56:522,48,0	0/0:10,0:10:5.40:0,5,534
chr10	107197811	.	AAG	A	178.14	PASS	AB=0.970;AC=9;AF=0.161;AN=56;BaseQRankSum=7.791;DP=681;FS=1.416;HRun=0;HaplotypeScore=88.4970;InbreedingCoeff=0.1089;MQ=53.23;MQ0=23;MQRankSum=-1.139;QD=1.37;ReadPosRankSum=2.449;VQSLOD=1.1183;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,9:50:45.53:0,46,1047	0/1:7,0:7:1.01:1,0,31	0/0:44,0:15:19.10:0,19,168	0/0:63,0:13:5.53:0,6,95	0/0:23,0:21:39.13:0,39,567	0/0:21,0:21:0.84:0,1,478	0/0:20,0:20:48.16:0,48,725	0/0:28,0:28:6.49:0,6,27	0/0:22,0:22:45.53:0,46,579	0/0:23,0:23:16.99:0,17,638	0/1:15,0:14:8.99:9,0,294	1/1:19,0:19:30.79:146,31,0	0/0:21,0:21:50.94:0,51,710	0/0:15,0:15:32.92:0,33,454	0/0:36,0:36:68.91:0,69,1050	0/0:21,3:24:12.82:0,13,663	0/0:30,0:30:33.23:0,33,922	0/0:29,1:29:24.66:0,25,764	0/1:18,0:17:15.16:26,0,15	0/0:22,0:22:5.47:0,5,49	0/1:25,0:24:15.27:23,0,15	0/0:11,0:11:21.06:0,21,288	0/0:13,0:13:24.02:0,24,323	0/0:30,0:29:71.80:0,72,1037	0/1:11,2:13:52.63:53,0,249	0/0:24,0:24:12.51:0,13,590	0/1:21,0:21:6.50:51,0,7	0/1:11,1:12:2.25:2,0,400
chr10	107199016	.	AAAG	A	5505.86	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.610;DP=681;FS=13.360;HRun=0;HaplotypeScore=97.8999;InbreedingCoeff=0.9976;MQ=80.01;MQ0=0;MQRankSum=-6.182;QD=45.13;ReadPosRankSum=-1.717;VQSLOD=5.3542;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,2277	0/0:11,0:11:33.11:0,33,759	0/0:19,0:19:48.16:0,48,1045	0/0:19,0:19:49.86:0,50,965	0/0:14,0:14:42.14:0,42,943	0/0:18,0:18:54.19:0,54,1233	0/0:30,0:30:87.27:0,87,1906	1/1:0,24:24:72.21:1138,72,0	0/0:39,0:39:99:0,117,2695	0/0:23,0:23:69.24:0,69,1580	0/0:9,0:9:24.08:0,24,554	0/0:29,0:29:84.29:0,84,1934	0/0:26,0:26:75.26:0,75,1689	0/0:25,0:25:72.25:0,72,1645	0/0:51,0:51:99:0,154,3528	0/0:31,0:31:90.31:0,90,2028	0/0:33,0:33:99:0,99,2269	0/0:24,0:24:69.24:0,69,1565	1/1:0,25:25:75.23:1249,75,0	1/1:0,15:15:45.15:767,45,0	1/1:0,31:31:66.23:1126,66,0	0/0:22,0:22:66.23:0,66,1485	0/0:18,0:18:51.17:0,51,1137	0/0:25,0:25:75.26:0,75,1722	0/0:25,0:25:75.26:0,75,1679	0/0:23,0:22:66.23:0,66,1509	1/1:1,26:27:72.25:1227,72,0	0/0:10,0:10:18.06:0,18,415
chr10	107200284	.	TGTAA	T	7093.93	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.890;DP=815;FS=16.031;HRun=0;HaplotypeScore=159.7789;InbreedingCoeff=0.9998;MQ=70.26;MQ0=1;MQRankSum=-10.789;QD=45.18;ReadPosRankSum=-2.490;VQSLOD=4.0509;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,3629	0/0:19,0:19:57.20:0,57,1511	0/0:44,0:43:99:0,123,3007	0/0:36,0:33:86.78:0,87,2147	0/0:27,0:27:75.24:0,75,1967	0/0:18,0:18:51.13:0,51,1246	0/0:30,0:30:87.25:0,87,2219	1/1:1,39:40:99:2143,117,0	0/0:30,0:30:87.30:0,87,2257	0/0:29,0:29:87.29:0,87,2187	0/0:12,0:12:30.10:0,30,816	0/0:28,0:28:84.27:0,84,2194	0/0:29,0:29:87.24:0,87,2128	0/0:22,0:22:63.22:0,63,1565	0/0:37,0:37:99:0,111,2784	0/0:36,0:36:99:0,99,2633	0/0:32,0:32:64.89:0,65,2267	0/0:27,0:27:63.53:0,64,1974	1/1:1,21:22:60.19:1083,60,0	1/1:2,19:21:47.83:928,48,0	1/1:3,48:50:99:1973,102,0	0/0:22,0:22:60.21:0,60,1594	0/0:13,0:13:36.12:0,36,986	0/0:39,0:39:99:0,117,3032	0/0:30,0:30:81.26:0,81,2124	0/0:37,0:37:99:0,100,2601	1/1:4,19:23:51.17:967,51,0	0/0:12,0:12:35.86:0,36,910
chr10	107200286	.	TAA	T	2736.25	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=15.686;DP=804;FS=22.789;HRun=2;HaplotypeScore=142.3300;InbreedingCoeff=0.9997;MQ=69.29;MQ0=1;MQRankSum=-11.367;QD=18.24;ReadPosRankSum=-2.130;VQSLOD=-0.3429;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,150,2873	0/0:19,0:19:57.20:0,57,1126	0/0:44,0:42:99:0,126,2430	0/0:35,0:32:75.29:0,75,1572	0/0:29,0:29:78.72:0,79,1505	0/0:17,0:17:51.13:0,51,951	0/0:29,0:29:87.25:0,87,1682	1/1:39,0:39:99:1050,116,0	0/0:30,0:30:87.28:0,87,1698	0/0:29,0:29:87.29:0,87,1692	0/0:11,0:11:30.10:0,30,603	0/0:29,0:29:87.28:0,87,1670	0/0:29,0:29:87.23:0,87,1619	0/0:23,0:23:66.21:0,66,1234	0/0:37,0:37:99:0,109,2064	0/0:33,1:34:99:0,99,1939	0/0:31,0:32:78.22:0,78,1720	0/0:27,0:27:69.48:0,69,1501	1/1:21,0:21:59.54:458,60,0	1/1:19,1:20:47.43:336,47,0	1/1:48,0:47:99:700,99,0	0/0:20,0:20:60.21:0,60,1204	0/0:12,0:12:36.12:0,36,732	0/0:40,0:40:99:0,120,2322	0/0:27,0:27:81.26:0,81,1598	0/0:37,0:37:57.43:0,57,1964	1/1:20,2:22:50.53:368,51,0	0/0:12,0:12:29.81:0,30,665
chr10	107200322	.	CGT	C	353.83	PASS	AB=0.927;AC=13;AF=0.232;AN=56;BaseQRankSum=4.614;DP=822;FS=6.189;HRun=0;HaplotypeScore=151.0158;InbreedingCoeff=0.2502;MQ=52.71;MQ0=16;MQRankSum=-0.892;QD=1.29;ReadPosRankSum=1.043;VQSLOD=2.1923;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:62:45.23:0,45,815	0/1:17,0:17:22.09:22,0,35	0/0:38,0:17:2.68:0,3,11	0/0:39,0:15:5.82:0,6,35	0/0:21,5:24:26.97:0,27,259	0/1:21,0:21:61.33:61,0,213	0/0:26,0:26:35.33:0,35,358	1/1:34,0:32:5.73:31,6,0	0/0:38,0:38:0.92:0,1,620	0/0:24,0:24:24.62:0,25,269	0/0:18,0:18:3.52:0,4,291	0/1:27,4:31:2.21:136,0,2	0/1:27,0:27:50.19:50,0,481	0/0:32,0:32:27.42:0,27,646	0/0:44,0:44:50.33:0,50,867	0/0:35,0:35:21.18:0,21,442	0/0:38,1:39:2.15:0,2,444	0/0:29,0:28:17.43:0,17,362	1/1:21,0:22:8.79:51,9,0	0/1:13,0:16:0.17:0,0,0	1/1:39,0:37:2.98:24,3,0	0/0:14,0:14:12.91:0,13,166	0/0:13,0:13:26.91:0,27,271	0/1:50,1:51:86.09:86,0,818	0/0:26,0:26:50.84:0,51,558	0/0:31,0:28:23.86:0,24,470	0/1:10,0:13:5.42:39,0,5	0/0:12,0:12:24:0,24,298
chr10	107200772	.	A	AT	175.40	PASS	AB=0.526;AC=1;AF=0.018;AN=56;BaseQRankSum=-0.569;DP=591;FS=1.312;HRun=8;HaplotypeScore=80.0831;InbreedingCoeff=0.6290;MQ=71.26;MQ0=1;MQRankSum=-0.328;QD=17.54;ReadPosRankSum=0.665;VQSLOD=3.6474;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:45:0,45,412	0/1:1,9:10:0.39:250,0,0	0/0:25,0:24:34.23:0,34,299	0/0:18,0:15:25.31:0,25,192	0/0:21,0:21:42:0,42,384	0/0:21,0:20:54.02:0,54,494	0/0:23,0:23:57.03:0,57,522	0/0:26,0:26:54.01:0,54,494	0/0:17,0:17:48.02:0,48,439	0/0:21,0:21:51.02:0,51,466	0/0:10,0:10:24:0,24,215	0/0:22,0:22:54.02:0,54,493	0/0:19,0:19:54.03:0,54,494	0/0:34,0:35:86.07:0,86,774	0/0:30,0:30:51:0,51,462	0/0:29,0:29:60.03:0,60,549	0/0:21,1:22:22.35:0,22,459	0/0:12,0:12:33:0,33,296	0/0:17,0:17:36.02:0,36,329	0/0:22,0:22:54.02:0,54,494	0/0:29,0:29:75.01:0,75,682	0/0:18,0:18:32.99:0,33,297	0/0:21,0:21:26.99:0,27,243	0/0:17,0:17:32.95:0,33,294	0/0:20,0:20:51.01:0,51,467	0/0:26,0:26:63.02:0,63,576	0/0:21,0:21:54:0,54,489	0/0:10,0:10:30.02:0,30,275
chr10	107200910	.	T	TC	2079.57	PASS	AB=0.606;AC=51;AF=0.911;AN=56;BaseQRankSum=0.349;DP=381;FS=6.638;HRun=0;HaplotypeScore=96.5048;InbreedingCoeff=0.6049;MQ=56.31;MQ0=0;MQRankSum=-5.192;QD=5.74;ReadPosRankSum=-0.319;VQSLOD=2.9316;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,11:15:16.13:41,16,0	1/1:1,6:7:11.13:62,11,0	0/0:8,0:6:20.48:0,20,168	0/0:11,0:9:26.82:0,27,242	1/1:1,15:14:9.17:21,9,0	0/1:7,13:19:2.16:91,0,2	1/1:4,18:21:31.15:130,31,0	1/1:4,10:13:23.70:157,24,0	1/1:4,7:11:10.69:34,11,0	1/1:2,13:15:41.10:258,41,0	1/1:2,14:16:17.72:87,18,0	1/1:1,12:12:13.11:40,13,0	1/1:5,19:24:45.03:219,45,0	1/1:3,16:18:13.69:36,14,0	1/1:4,14:18:21.68:71,22,0	1/1:3,17:20:28.22:99,28,0	1/1:4,15:19:35.51:151,36,0	1/1:1,3:4:5.98:47,6,0	1/1:3,2:5:14.77:98,15,0	1/1:6,10:14:21.29:115,21,0	1/1:1,3:4:4.36:11,4,0	1/1:4,19:20:13.24:55,13,0	1/1:1,10:9:6.66:16,7,0	1/1:4,3:7:1.06:3,1,0	1/1:3,13:14:18:97,18,0	1/1:2,14:14:37.33:220,37,0	1/1:1,8:9:7.45:48,7,0	1/1:0,2:1:1.82:5,2,0
chr10	107200912	.	CT	C	4596.55	PASS	AB=0.917;AC=53;AF=0.946;AN=56;BaseQRankSum=-1.157;DP=399;FS=0.826;HRun=3;HaplotypeScore=89.7270;InbreedingCoeff=0.5447;MQ=56.29;MQ0=0;MQRankSum=-5.357;QD=11.76;ReadPosRankSum=1.302;VQSLOD=3.1462;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,12:18:11.33:199,11,0	1/1:1,6:7:15.98:115,16,0	0/0:8,0:6:24:0,24,275	0/1:10,1:9:5.06:5,0,255	1/1:0,18:16:21.40:102,21,0	1/1:8,13:20:12.21:268,12,0	1/1:4,18:21:46.12:288,46,0	1/1:5,10:14:25.33:133,25,0	1/1:4,7:11:19.09:89,19,0	1/1:1,15:16:41.15:202,41,0	1/1:2,14:16:31.62:143,32,0	1/1:1,12:12:22.56:167,23,0	1/1:4,20:24:55.87:362,56,0	1/1:3,16:18:34.44:203,34,0	1/1:4,14:18:42.94:239,43,0	1/1:4,17:21:52.63:366,53,0	1/1:5,15:20:42.41:256,42,0	1/1:0,4:4:8.87:72,9,0	1/1:4,2:6:14.62:97,15,0	1/1:8,10:16:36.01:270,36,0	1/1:4,3:7:14.03:121,14,0	1/1:4,19:20:32.43:203,32,0	1/1:1,10:9:13.45:95,13,0	1/1:3,4:7:2.69:8,3,0	1/1:2,14:14:32.84:231,33,0	1/1:4,14:16:39.51:243,40,0	1/1:0,9:9:10.64:93,11,0	1/1:0,2:1:3:26,3,0
chr10	107200913	.	T	TC	11224.41	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-5.104;DP=415;FS=0.886;HRun=1;HaplotypeScore=68.8752;InbreedingCoeff=0.5661;MQ=59.03;MQ0=0;MQRankSum=-6.587;QD=27.71;ReadPosRankSum=-0.698;VQSLOD=4.4197;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,1:18:36.10:513,36,0	1/1:7,0:7:20.82:226,21,0	0/0:10,0:8:24:0,24,263	0/1:12,0:10:5.03:5,0,269	1/1:19,0:17:27.06:393,27,0	1/1:18,3:20:27.01:777,27,0	1/1:22,0:21:56.84:739,57,0	1/1:17,0:16:26.95:218,27,0	1/1:11,0:11:24.01:309,24,0	1/1:16,0:16:44.81:352,45,0	1/1:17,0:17:38.68:535,39,0	1/1:13,0:12:26.99:350,27,0	1/1:24,1:24:68.73:796,69,0	1/1:19,1:19:42.57:598,43,0	1/1:17,1:18:51.09:707,51,0	1/1:21,0:21:60.20:882,60,0	1/1:18,2:20:50.50:530,51,0	1/1:4,0:4:9.02:93,9,0	1/1:7,2:9:18.03:212,18,0	1/1:16,2:16:47.98:637,48,0	1/1:9,0:9:15.02:195,15,0	1/1:22,1:20:48.12:673,48,0	1/1:10,1:9:15.02:220,15,0	1/1:7,0:7:2.83:45,3,0	1/1:17,0:15:35.71:494,36,0	1/1:14,5:17:50.60:472,51,0	1/1:9,0:9:19.94:209,20,0	1/1:2,0:1:3.01:45,3,0
chr10	107207493	.	C	CT	677.92	PASS	AB=0.885;AC=14;AF=0.250;AN=56;BaseQRankSum=3.566;DP=708;FS=0.585;HRun=14;HaplotypeScore=104.4416;InbreedingCoeff=0.5753;MQ=66.59;MQ0=2;MQRankSum=1.275;QD=3.04;ReadPosRankSum=-4.333;VQSLOD=-0.3441;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:36,2:40:12.86:13,0,270	1/1:3,6:9:6:53,6,0	0/0:32,0:19:9.15:0,9,102	0/1:26,0:14:5.97:6,0,35	0/0:22,0:27:38.13:0,38,238	0/0:27,0:27:26.27:0,26,171	0/0:20,0:20:1.41:0,1,107	1/1:10,14:25:43.02:316,43,0	0/0:25,0:28:25.02:0,25,242	0/0:20,0:22:14.86:0,15,148	0/0:19,0:22:37.25:0,37,231	0/0:26,2:28:20.47:0,20,205	0/0:26,0:29:37.11:0,37,235	0/0:21,0:21:32.19:0,32,206	0/1:16,3:20:9.31:9,0,187	0/0:25,2:29:4.01:0,4,135	0/0:32,0:34:68.49:0,68,421	0/0:30,1:33:37.43:0,37,355	1/1:17,16:33:36.55:256,37,0	1/1:10,10:20:9.28:126,9,0	0/1:17,10:28:0.61:33,0,1	0/0:20,1:24:31.31:0,31,196	0/0:19,0:19:29.36:0,29,191	0/0:18,0:20:38.31:0,38,246	0/0:29,0:35:32.24:0,32,192	0/0:26,0:25:32.34:0,32,220	1/1:4,3:19:7.39:36,7,0	0/0:7,0:8:10.66:0,11,60
chr10	107207507	.	TA	T	941.21	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.077;DP=690;FS=0.516;HRun=3;HaplotypeScore=76.7113;InbreedingCoeff=0.9355;MQ=73.83;MQ0=1;MQRankSum=0.804;QD=8.88;ReadPosRankSum=-3.177;VQSLOD=-0.1886;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,104,1038	0/0:9,0:9:20.91:0,21,175	0/0:33,0:23:34.17:0,34,370	0/0:24,1:14:2.39:0,2,85	0/0:33,0:33:75.13:0,75,702	0/0:18,0:18:51.09:0,51,541	0/0:19,0:19:51.04:0,51,509	1/1:18,4:22:36.63:248,37,0	0/0:29,0:29:66.24:0,66,696	0/0:22,0:22:51.96:0,52,544	0/0:22,0:22:49.60:0,50,511	0/0:27,0:27:66.14:0,66,725	0/0:25,1:26:68.37:0,68,762	0/0:21,0:21:57.07:0,57,600	0/0:21,0:21:56.27:0,56,550	0/0:29,0:29:69.18:0,69,669	0/0:37,0:37:98.68:0,99,1072	0/0:34,0:34:91.37:0,91,976	1/1:26,0:25:43.96:340,44,0	1/1:17,0:17:25.68:188,26,0	1/1:24,0:24:34.61:274,35,0	0/0:25,0:25:62.15:0,62,612	0/0:17,0:17:42.10:0,42,485	0/0:26,0:27:72.10:0,72,760	0/0:27,0:27:60.18:0,60,615	0/0:31,0:31:78.10:0,78,778	1/1:17,0:16:7.56:61,8,0	0/0:9,0:9:18.93:0,19,211
chr10	107212324	.	TG	T	4273.30	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=1.733;DP=528;FS=6.311;HRun=3;HaplotypeScore=64.9303;InbreedingCoeff=0.9674;MQ=85.40;MQ0=3;MQRankSum=-1.538;QD=31.19;ReadPosRankSum=0.712;VQSLOD=4.6740;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.20:0,63,869	1/1:1,8:8:24.08:295,24,0	0/0:22,0:22:50.95:0,51,759	0/0:24,0:24:72.02:0,72,911	0/0:7,0:7:12.04:0,12,163	0/0:18,0:18:39.13:0,39,554	0/0:25,0:25:72.15:0,72,952	1/1:1,20:21:57.17:693,57,0	0/0:13,0:13:39.13:0,39,545	0/0:12,0:12:33.10:0,33,439	0/0:7,0:7:18.06:0,18,259	0/0:32,0:32:90.26:0,90,1270	0/0:16,0:16:42.10:0,42,573	0/0:26,0:25:75.16:0,75,1022	0/0:28,0:27:78.26:0,78,1087	0/0:11,0:11:30.10:0,30,423	0/0:31,0:31:87.25:0,87,1214	0/0:28,0:27:81.27:0,81,1162	1/1:3,14:17:45.11:540,45,0	1/1:1,5:6:9.03:111,9,0	1/1:1,57:58:99:1892,153,0	0/0:5,0:5:12.50:0,13,146	0/0:4,0:4:12.04:0,12,172	0/0:23,0:23:63.21:0,63,888	0/0:9,0:9:24.04:0,24,321	0/0:17,0:17:48.12:0,48,640	1/1:1,25:26:60.19:741,60,0	0/0:10,0:9:27.09:0,27,388
chr10	107212517	.	C	CA	7474.19	PASS	AB=0.965;AC=50;AF=0.962;AN=52;BaseQRankSum=-3.676;DP=319;FS=2.754;HRun=1;HaplotypeScore=58.4172;InbreedingCoeff=-0.0553;MQ=61.63;MQ0=13;MQRankSum=-1.310;QD=23.58;ReadPosRankSum=1.603;VQSLOD=4.9701;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:18:37.28:539,37,0	1/1:2,5:7:21.06:279,21,0	0/1:30,1:7:64.44:64,0,88	0/1:47,2:15:61.95:62,0,148	1/1:2,8:9:21.07:313,21,0	1/1:0,9:9:27.09:403,27,0	1/1:5,6:10:26.96:314,27,0	1/1:12,10:19:23.69:352,24,0	1/1:2,5:6:17.99:242,18,0	1/1:4,8:12:30.07:409,30,0	1/1:1,8:9:27.08:381,27,0	1/1:5,10:15:38.79:457,39,0	1/1:2,4:6:12.04:179,12,0	1/1:2,4:5:11.97:152,12,0	1/1:2,7:9:24:312,24,0	1/1:1,2:3:5.69:89,6,0	1/1:4,14:16:42.05:558,42,0	1/1:1,5:6:15.05:224,15,0	1/1:9,11:17:37.31:537,37,0	./.	1/1:1,6:7:9.03:134,9,0	./.	1/1:3,3:6:14.86:168,15,0	1/1:1,6:7:18.06:267,18,0	1/1:1,3:4:9.03:134,9,0	1/1:4,7:11:33.07:412,33,0	1/1:3,4:7:14.62:223,15,0	1/1:1,6:7:18.06:269,18,0
chr10	107212645	.	C	CCT	118.86	PASS	AB=0.667;AC=1;AF=0.021;AN=48;BaseQRankSum=2.064;DP=337;FS=0.000;HRun=0;HaplotypeScore=64.4141;InbreedingCoeff=0.1544;MQ=73.52;MQ0=11;MQRankSum=-2.661;QD=11.89;ReadPosRankSum=-2.737;VQSLOD=2.4893;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:57.12:0,57,802	0/0:4,0:4:9.03:0,9,138	0/0:30,0:16:29.82:0,30,423	0/0:31,0:11:8.34:0,8,149	0/0:15,0:15:18.05:0,18,256	0/0:11,0:11:28.91:0,29,418	0/0:19,0:18:51.11:0,51,715	0/1:5,5:9:50.23:192,0,50	0/0:4,0:4:9.02:0,9,117	0/0:10,0:10:30.02:0,30,393	0/0:12,0:12:24:0,24,316	./.	0/0:9,0:8:24.06:0,24,345	0/0:12,0:10:27.08:0,27,394	0/0:11,0:11:33.10:0,33,485	0/0:10,0:9:21.07:0,21,320	0/0:27,0:27:63.17:0,63,917	0/0:22,1:22:5.30:0,5,768	0/0:1,0:1:0.47:0,0,1	./.	./.	0/0:4,0:3:3.01:0,3,46	0/0:10,0:9:21.06:0,21,300	0/0:14,0:14:42.12:0,42,603	0/0:14,0:14:17.34:0,17,462	0/0:11,0:11:30.02:0,30,393	./.	0/0:11,0:11:27.06:0,27,386
chr10	107213139	.	A	AGCAC	2597.30	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.307;DP=763;FS=1.360;HRun=0;HaplotypeScore=128.5767;InbreedingCoeff=0.9448;MQ=87.79;MQ0=0;MQRankSum=-3.017;QD=70.20;ReadPosRankSum=0.747;VQSLOD=5.7685;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,163,2990	0/0:3,0:3:9.03:0,9,161	0/0:25,0:25:62.92:0,63,1097	0/0:30,0:30:78.27:0,78,1505	0/0:23,0:23:63.22:0,63,1176	0/0:17,0:17:48.16:0,48,873	0/0:30,0:30:90.31:0,90,1673	0/0:19,0:19:57.20:0,57,1060	0/0:30,0:30:90.31:0,90,1674	0/0:34,0:34:81.28:0,81,1509	0/0:15,0:15:45.14:0,45,785	1/1:3,33:37:99:2692,102,0	0/0:23,0:23:57.20:0,57,1055	0/0:25,0:25:66.21:0,66,1193	0/0:35,0:35:99:0,102,1904	0/0:28,0:28:81.28:0,81,1506	0/0:40,0:40:99:0,120,2208	0/0:17,0:17:45.15:0,45,840	0/0:22,0:22:63.22:0,63,1156	0/0:19,0:19:54.19:0,54,1008	0/0:46,0:46:99:0,132,2424	0/0:25,0:25:66.23:0,66,1226	0/0:26,0:26:78.27:0,78,1456	0/0:31,0:31:87.30:0,87,1595	0/0:26,0:26:75.25:0,75,1370	0/0:32,0:32:96.30:0,96,1669	0/0:39,0:39:99:0,108,1937	0/0:10,0:10:30.09:0,30,526
chr10	107213571	.	CG	C	953.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.461;DP=620;FS=1.642;HRun=1;HaplotypeScore=61.7277;InbreedingCoeff=0.9986;MQ=88.09;MQ0=0;MQRankSum=-0.487;QD=38.13;ReadPosRankSum=1.014;VQSLOD=4.2171;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,148,2337	0/0:9,0:9:27.09:0,27,424	0/0:23,0:23:65.98:0,66,939	0/0:21,0:21:57.19:0,57,870	0/0:26,0:26:75.24:0,75,1157	0/0:18,0:18:54.18:0,54,861	0/0:24,0:24:72.23:0,72,1122	0/0:27,0:27:81.22:0,81,1220	0/0:18,0:18:54.17:0,54,838	0/0:18,0:18:54.18:0,54,861	0/0:12,0:12:36.11:0,36,552	1/1:0,25:25:75.25:1048,75,0	0/0:22,0:22:60.20:0,60,955	0/0:14,0:14:42.14:0,42,668	0/0:20,0:20:60.16:0,60,925	0/0:19,0:19:57.19:0,57,910	0/0:33,0:33:96.33:0,96,1533	0/0:31,0:31:90.31:0,90,1434	0/0:19,0:19:54.18:0,54,849	0/0:26,0:26:69.23:0,69,1085	0/0:35,0:35:99:0,105,1648	0/0:19,0:19:54.17:0,54,838	0/0:19,0:19:54.16:0,54,825	0/0:22,0:22:66.18:0,66,1007	0/0:12,0:12:33.11:0,33,523	0/0:18,0:18:51.14:0,51,744	0/0:20,0:20:57.19:0,57,904	0/0:20,0:20:57.14:0,57,858
chr10	107213832	.	T	TG	2879.15	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-0.488;DP=508;FS=22.978;HRun=7;HaplotypeScore=48.3962;InbreedingCoeff=0.9413;MQ=62.00;MQ0=5;MQRankSum=-1.261;QD=26.17;ReadPosRankSum=0.774;VQSLOD=1.8654;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,99,956	0/0:3,0:3:6.01:0,6,58	0/0:12,0:8:12.01:0,12,116	0/0:11,0:7:18.02:0,18,170	0/0:18,0:18:39.06:0,39,377	0/0:24,0:23:69.11:0,69,666	0/0:25,0:25:69.09:0,69,660	1/1:7,17:24:54.12:634,54,0	0/0:16,0:16:45.07:0,45,434	0/0:21,0:21:54.08:0,54,521	0/0:19,0:19:45.07:0,45,435	1/1:0,14:14:36.11:434,36,0	0/0:14,0:12:36.04:0,36,341	0/0:11,0:11:33.05:0,33,319	0/0:23,0:22:60.09:0,60,579	0/0:17,0:17:51.08:0,51,492	0/0:35,0:34:87.14:0,87,840	0/0:20,0:20:54.04:0,54,512	1/1:3,14:17:42.13:503,42,0	1/1:2,12:14:39.08:454,39,0	1/1:4,18:21:51.16:616,51,0	0/0:12,0:12:30.52:0,31,290	0/0:14,0:14:39.06:0,39,376	0/0:29,0:29:69.10:0,69,666	0/0:13,0:13:36.06:0,36,347	0/0:18,0:17:45.07:0,45,434	1/1:3,12:14:36.07:418,36,0	1/1:4,0:4:2.68:11,3,0
chr10	107213922	.	CA	C	627.14	PASS	AB=0.829;AC=19;AF=0.339;AN=56;BaseQRankSum=1.289;DP=419;FS=6.071;HRun=16;HaplotypeScore=69.4752;InbreedingCoeff=0.0445;MQ=54.95;MQ0=19;MQRankSum=1.014;QD=2.60;ReadPosRankSum=1.593;VQSLOD=-0.6200;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,2:24:30.47:30,0,219	0/0:11,0:11:20.93:0,21,167	0/0:14,0:5:8.77:0,9,67	0/0:6,1:4:5.15:0,5,30	0/1:13,2:16:9.91:10,0,160	0/1:17,4:20:27.25:27,0,216	0/1:9,3:13:26.31:26,0,114	1/1:11,6:15:18.43:101,18,0	0/0:10,0:10:17.88:0,18,133	0/1:12,2:14:9.39:9,0,121	0/1:12,2:13:0.89:1,0,127	0/0:11,0:11:20.90:0,21,160	0/0:9,0:10:23.57:0,24,164	0/1:11,1:12:18.84:19,0,50	0/0:13,1:16:1.66:0,2,175	0/0:8,1:11:7.67:0,8,140	0/0:19,1:21:27.19:0,27,251	0/0:23,2:24:3.61:0,4,234	0/1:8,9:14:12.06:159,0,12	1/1:8,7:17:27.50:155,27,0	1/1:3,1:5:4.06:12,4,0	0/1:6,3:10:11.41:46,0,11	0/0:14,0:14:20.98:0,21,176	0/1:17,2:17:9.05:9,0,149	0/0:11,0:10:23.85:0,24,185	0/1:11,3:13:46.79:64,0,47	1/1:7,10:15:3.29:124,3,0	0/0:15,0:13:19.42:0,19,147
chr10	107213988	.	T	TG	535.50	PASS	AB=0.826;AC=7;AF=0.125;AN=56;BaseQRankSum=1.830;DP=483;FS=10.500;HRun=0;HaplotypeScore=194.1171;InbreedingCoeff=0.5906;MQ=55.16;MQ0=16;MQRankSum=0.551;QD=7.14;ReadPosRankSum=-0.483;VQSLOD=2.7235;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:41.15:0,41,336	0/0:9,0:9:23.90:0,24,196	0/0:44,0:13:15.78:0,16,123	0/0:53,0:20:17.28:0,17,252	0/0:25,0:25:60.09:0,60,491	0/0:21,0:17:50.77:0,51,408	0/0:10,0:10:26.64:0,27,206	0/1:9,0:9:5.91:112,0,6	0/0:9,0:8:23.75:0,24,179	0/0:28,1:28:46.64:0,47,653	0/0:15,0:15:44.95:0,45,394	0/0:21,0:21:45.34:0,45,329	0/0:12,0:12:35.75:0,36,278	0/0:5,0:5:14.98:0,15,126	0/0:14,0:14:41.59:0,42,379	0/0:17,0:17:50.85:0,51,430	0/0:10,0:10:26.90:0,27,217	0/0:15,0:14:32.89:0,33,266	0/1:10,5:15:36.71:137,0,37	1/1:12,12:23:24.05:161,24,0	0/1:5,3:6:4.73:58,0,5	0/0:7,0:7:20.93:0,21,166	0/0:13,0:11:31.51:0,32,253	0/0:11,0:10:14.50:0,15,98	0/0:13,0:13:38.88:0,39,334	0/0:23,0:21:60.81:0,61,512	1/1:12,7:19:24.92:210,25,0	0/0:12,0:12:29.92:0,30,261
chr10	107213993	.	TTTTTG	T	664.23	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=3.873;DP=484;FS=3.368;HRun=0;HaplotypeScore=229.4854;InbreedingCoeff=0.1184;MQ=55.65;MQ0=17;MQRankSum=-2.163;QD=6.85;ReadPosRankSum=-4.346;VQSLOD=2.0609;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:30.79:0,31,347	0/0:8,0:8:11.08:0,11,70	0/0:50,0:15:6.27:0,6,194	0/0:59,0:20:10.53:0,11,184	0/0:24,0:24:33.61:0,34,441	0/0:19,0:15:40.18:0,40,269	0/1:10,0:10:6.18:6,0,177	0/1:6,0:6:5.88:6,0,20	0/0:8,0:7:20.58:0,21,186	0/0:28,0:27:54.89:0,55,544	0/0:16,0:16:37.81:0,38,305	1/1:18,4:23:56.53:740,57,0	0/0:12,0:12:22.45:0,22,238	0/0:6,0:6:12.78:0,13,164	0/0:15,0:15:34:0,34,508	0/0:15,0:15:42.92:0,43,465	0/0:10,0:10:24.42:0,24,197	0/0:12,0:11:8.21:0,8,192	0/0:15,0:15:16.77:0,17,180	0/1:25,0:24:11.02:11,0,307	0/1:7,0:5:15.62:16,0,54	0/0:7,0:7:20.80:0,21,195	0/0:15,0:13:27.31:0,27,267	0/1:12,0:11:1.30:1,0,65	0/0:13,0:13:2.04:0,2,220	0/0:20,0:18:33.57:0,34,354	0/0:17,0:17:5.47:0,5,239	0/1:14,0:14:9.35:9,0,162
chr10	107213996	.	TTG	T	5415.77	PASS	AB=0.889;AC=47;AF=0.839;AN=56;BaseQRankSum=0.554;DP=481;FS=27.936;HRun=0;HaplotypeScore=194.2635;InbreedingCoeff=0.1560;MQ=53.68;MQ0=17;MQRankSum=-0.382;QD=12.54;ReadPosRankSum=1.155;VQSLOD=2.9482;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,10:18:32:267,32,0	1/1:2,5:7:20.25:202,20,0	0/0:49,0:12:19.31:0,19,158	0/1:64,0:22:5.25:5,0,99	0/1:14,8:22:3.97:189,0,4	1/1:12,7:15:43.68:445,44,0	1/1:8,2:10:25.14:213,25,0	1/1:5,0:5:6.22:45,6,0	1/1:4,3:6:15.15:102,15,0	1/1:17,10:26:9.64:483,10,0	1/1:8,9:17:31.50:349,32,0	1/1:22,0:23:34.08:231,34,0	0/1:8,5:13:33.31:171,0,33	1/1:6,0:6:13.60:104,14,0	0/1:9,4:13:52.76:114,0,53	1/1:9,6:15:5.14:279,5,0	1/1:5,5:10:23.60:215,24,0	1/1:11,2:12:20.13:143,20,0	0/1:11,0:11:3.62:38,0,4	1/1:24,0:23:21.20:152,21,0	0/1:7,0:5:0.11:25,0,0	1/1:3,4:7:19.02:124,19,0	1/1:12,5:15:29.40:279,29,0	1/1:8,5:12:18.22:125,18,0	1/1:10,4:14:16.97:258,17,0	1/1:8,11:17:47.98:510,48,0	0/1:17,0:17:4.56:86,0,5	1/1:12,2:14:28.01:260,28,0
chr10	107213997	.	TGG	T	5338.23	PASS	AB=0.917;AC=50;AF=0.893;AN=56;BaseQRankSum=3.586;DP=476;FS=0.706;HRun=2;HaplotypeScore=194.1555;InbreedingCoeff=0.1331;MQ=53.67;MQ0=18;MQRankSum=0.911;QD=12.53;ReadPosRankSum=3.085;VQSLOD=2.0254;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:31.32:146,31,0	1/1:7,0:7:17.33:94,17,0	0/0:50,0:12:2.66:0,3,199	0/1:65,0:23:22.59:23,0,129	0/1:17,0:21:4.61:165,0,5	1/1:14,0:15:43.57:326,44,0	1/1:10,0:10:17.84:123,18,0	1/1:4,0:5:11.39:68,11,0	1/1:7,0:6:16.88:111,17,0	0/1:25,0:25:37.30:268,0,37	1/1:16,0:17:23.65:220,24,0	1/1:23,0:23:60.83:418,61,0	1/1:13,0:13:15.56:149,16,0	1/1:2,3:6:14.42:88,14,0	0/1:11,0:13:22.14:150,0,22	1/1:14,0:15:14.35:192,14,0	1/1:10,0:10:21.87:123,22,0	1/1:11,1:11:19.04:135,19,0	1/1:6,5:11:18.96:196,19,0	1/1:7,17:23:66:675,66,0	1/1:4,3:5:12.88:126,13,0	1/1:6,0:6:14.45:92,14,0	1/1:15,1:15:28.89:226,29,0	1/1:12,1:12:16.10:81,16,0	1/1:11,1:13:11.73:194,12,0	1/1:18,0:16:44.86:286,45,0	1/1:10,7:17:49.97:509,50,0	1/1:10,2:14:15.34:154,15,0
chr10	107214016	.	TTG	T	355.90	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=-1.817;DP=502;FS=3.221;HRun=0;HaplotypeScore=247.9402;InbreedingCoeff=0.4253;MQ=54.04;MQ0=9;MQRankSum=-0.848;QD=8.09;ReadPosRankSum=-3.677;VQSLOD=2.4242;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:24.77:0,25,279	0/0:7,0:7:17.47:0,17,147	0/0:49,0:16:33.52:0,34,461	0/0:70,0:23:33.87:0,34,463	0/0:25,0:25:47.90:0,48,434	0/0:15,0:13:22.35:0,22,274	0/0:9,0:9:5.85:0,6,167	0/1:7,0:5:11.36:13,0,11	0/0:11,0:11:11.59:0,12,162	0/0:19,1:20:21.38:0,21,323	0/0:17,0:17:37.30:0,37,374	1/1:21,4:25:34.41:445,34,0	0/0:13,0:13:36.01:0,36,289	0/0:8,0:8:10.89:0,11,118	0/0:13,0:13:20.29:0,20,296	0/0:13,0:13:12.90:0,13,302	0/0:11,0:11:19.94:0,20,197	0/0:11,0:10:20.47:0,20,197	0/1:12,0:12:3.46:3,0,141	0/0:23,1:24:45.32:0,45,381	0/0:9,0:8:15.53:0,16,93	0/0:14,0:13:32.13:0,32,258	0/0:16,0:16:44.02:0,44,406	0/0:13,0:12:24.27:0,24,252	0/0:18,0:18:36.03:0,36,345	0/0:23,0:20:3.42:0,3,320	0/0:17,0:17:36.87:0,37,334	0/0:13,0:13:34.47:0,34,288
chr10	107214018	.	G	GTTT	6808.46	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=2.842;DP=488;FS=7.422;HRun=4;HaplotypeScore=229.9971;InbreedingCoeff=0.7548;MQ=54.75;MQ0=7;MQRankSum=-0.973;QD=18.30;ReadPosRankSum=1.842;VQSLOD=0.6974;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:41.16:254,41,0	1/1:8,0:8:18.58:119,19,0	0/0:46,0:16:26.20:0,26,284	0/0:68,0:23:16.49:0,16,380	1/1:23,0:23:45.97:291,46,0	1/1:15,0:14:38.97:261,39,0	1/1:9,0:9:26.25:167,26,0	1/1:10,0:8:18.70:111,19,0	1/1:9,0:9:24.53:137,25,0	1/1:18,0:18:27.71:334,28,0	1/1:16,0:16:36.82:197,37,0	1/1:10,15:25:72.91:1325,73,0	1/1:13,0:13:33.93:234,34,0	0/1:8,0:8:0.87:123,0,1	1/1:11,0:11:0.09:119,0,0	1/1:13,0:13:27.74:193,28,0	1/1:10,0:10:23.72:186,24,0	1/1:11,0:11:23.15:159,23,0	1/1:13,0:13:31.45:282,31,0	1/1:24,0:24:62.17:474,62,0	1/1:9,0:8:22.49:141,22,0	1/1:13,0:12:33.27:213,33,0	1/1:17,0:17:28.75:232,29,0	1/1:13,0:12:23.12:124,23,0	1/1:16,0:16:46.46:307,46,0	1/1:23,0:20:53.67:366,54,0	1/1:16,0:16:23.63:240,24,0	1/1:12,0:12:30.29:222,30,0
chr10	107214027	.	G	GT	10418.04	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-1.550;DP=489;FS=17.839;HRun=3;HaplotypeScore=204.8243;InbreedingCoeff=0.6320;MQ=53.06;MQ0=5;MQRankSum=-2.447;QD=22.85;ReadPosRankSum=4.460;VQSLOD=2.3882;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:45.08:469,45,0	1/1:1,7:8:18.03:185,18,0	0/0:33,0:13:11.42:0,11,126	0/1:47,0:21:8.18:8,0,193	1/1:2,21:23:49.78:486,50,0	1/1:0,15:14:39.08:448,39,0	1/1:0,9:9:24.02:249,24,0	1/1:0,15:13:36.08:437,36,0	1/1:2,8:10:23.59:217,24,0	1/1:9,14:23:52.94:559,53,0	1/1:0,13:13:32.96:311,33,0	1/1:3,23:26:68.60:755,69,0	1/1:3,11:14:27.85:300,28,0	1/1:2,8:10:20.96:241,21,0	1/1:2,15:17:7.61:329,8,0	1/1:1,13:14:26.52:401,27,0	1/1:1,15:16:35.96:389,36,0	1/1:2,9:11:25.55:266,26,0	1/1:0,10:10:30.08:348,30,0	1/1:2,24:26:66.03:672,66,0	1/1:0,10:9:27.07:307,27,0	1/1:1,16:16:44.90:445,45,0	1/1:5,11:16:40.05:353,40,0	1/1:2,13:15:25.45:220,25,0	1/1:2,15:17:46.97:497,47,0	1/1:3,21:21:56.68:713,57,0	1/1:1,16:17:32.13:491,32,0	1/1:2,10:12:32.70:322,33,0
chr10	107214028	.	TTGG	T	3880.86	PASS	AB=0.985;AC=46;AF=0.821;AN=56;BaseQRankSum=-5.693;DP=493;FS=3.600;HRun=0;HaplotypeScore=239.0823;InbreedingCoeff=-0.1810;MQ=52.10;MQ0=5;MQRankSum=0.519;QD=7.87;ReadPosRankSum=-6.219;VQSLOD=1.8668;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:16.96:107,17,0	1/1:9,0:9:9.25:65,9,0	0/1:29,0:12:25.04:25,0,155	0/1:47,0:21:37.98:38,0,211	1/1:23,1:24:7.54:167,8,0	1/1:15,0:14:9.84:94,10,0	1/1:9,0:9:0.52:4,1,0	1/1:16,0:14:33.84:355,34,0	0/1:11,0:11:2.21:58,0,2	1/1:24,2:26:36.82:397,37,0	0/1:13,0:13:2.45:49,0,2	1/1:27,0:27:37.28:357,37,0	1/1:14,1:15:5.74:141,6,0	0/1:9,1:10:3.79:174,0,4	0/1:17,0:17:49.85:133,0,50	0/1:14,0:14:21.52:75,0,22	1/1:15,1:16:12.38:247,12,0	1/1:11,0:11:4.72:99,5,0	1/1:10,0:10:16.69:118,17,0	1/1:25,1:26:35.84:194,36,0	1/1:10,0:9:11.99:109,12,0	1/1:16,1:16:13.79:165,14,0	0/1:16,0:16:7.87:82,0,8	0/1:15,0:15:22.27:39,0,22	1/1:16,1:17:12.63:108,13,0	1/1:23,0:20:30.89:261,31,0	0/1:16,1:17:1.13:125,0,1	1/1:11,1:12:17.44:93,17,0
chr10	107215503	.	CGT	C	218.06	PASS	AB=0.923;AC=17;AF=0.327;AN=52;BaseQRankSum=5.503;DP=571;FS=0.000;HRun=0;HaplotypeScore=71.8201;InbreedingCoeff=-0.1835;MQ=63.74;MQ0=6;MQRankSum=0.013;QD=0.63;ReadPosRankSum=0.199;VQSLOD=0.8201;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:7.57:0,8,167	1/1:8,0:12:2.61:32,3,0	./.	./.	0/0:13,0:13:11.96:0,12,112	0/1:15,0:17:13.01:13,0,181	0/1:24,2:26:14.19:14,0,202	0/0:28,0:27:9.81:0,10,64	0/0:15,0:15:18.04:0,18,238	0/0:20,0:20:4.37:0,4,47	0/0:12,0:12:6.01:0,6,69	0/1:17,0:22:0.16:0,0,0	0/0:14,0:14:9.88:0,10,67	0/1:17,1:18:23.22:23,0,42	0/1:18,0:18:17.06:17,0,120	0/1:19,2:21:34.47:34,0,241	0/1:23,1:25:25.32:25,0,152	0/1:19,1:21:7.74:8,0,224	1/1:18,2:19:3.89:34,4,0	0/1:9,0:11:8.09:8,0,37	0/1:44,2:43:12.49:53,0,12	0/0:11,0:11:12.02:0,12,152	0/0:9,0:9:0.62:0,1,39	0/1:50,1:51:1.35:1,0,646	0/1:17,0:17:5.11:5,0,261	0/0:24,0:24:5.53:0,6,230	0/1:16,1:19:8.09:86,0,8	0/0:7,0:7:3.01:0,3,41
chr10	107220375	.	G	GA	851.36	PASS	AB=0.890;AC=15;AF=0.268;AN=56;BaseQRankSum=6.457;DP=563;FS=2.211;HRun=13;HaplotypeScore=82.2695;InbreedingCoeff=0.5118;MQ=70.83;MQ0=0;MQRankSum=-0.111;QD=4.81;ReadPosRankSum=-2.524;VQSLOD=1.6739;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:34:27.36:0,27,323	1/1:1,4:5:15.02:139,15,0	0/0:11,0:10:9.76:0,10,78	0/0:14,0:11:5.65:0,6,39	0/0:18,1:21:6.76:0,7,183	0/0:15,0:17:36.72:0,37,238	0/0:24,2:31:7.77:0,8,302	1/1:15,1:16:22.26:105,22,0	0/1:7,2:9:15.98:16,0,50	0/0:25,0:25:26.51:0,27,185	0/0:6,0:6:5.88:0,6,41	0/0:24,0:27:26.81:0,27,173	0/0:26,3:29:17.24:0,17,241	0/0:18,0:18:32.56:0,33,226	0/0:19,2:21:10.74:0,11,217	0/1:17,3:20:13.92:14,0,187	0/0:36,3:39:5.63:0,6,318	0/0:21,1:26:28.08:0,28,323	1/1:25,0:25:47.36:229,47,0	0/1:10,0:10:5.75:47,0,6	1/1:36,0:35:13.17:198,13,0	0/1:11,2:13:14.79:15,0,66	0/0:14,0:14:16.83:0,17,121	0/0:24,0:24:26.51:0,27,185	0/0:13,0:13:21.59:0,22,146	0/1:15,2:17:1.14:1,0,137	1/1:26,0:26:49.06:266,49,0	0/0:15,0:16:18.88:0,19,127
chr10	107220387	.	A	AG	2491.06	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-4.488;DP=538;FS=15.706;HRun=0;HaplotypeScore=62.6280;InbreedingCoeff=0.9384;MQ=69.75;MQ0=0;MQRankSum=-1.315;QD=23.95;ReadPosRankSum=1.109;VQSLOD=3.5595;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:86.12:0,86,998	0/0:7,0:7:3.72:0,4,43	0/0:12,0:11:20.18:0,20,271	0/0:11,0:8:8.94:0,9,82	0/0:23,0:23:62.62:0,63,687	0/0:18,0:18:50.99:0,51,584	0/0:34,0:34:85.50:0,86,973	1/1:2,15:18:47.97:497,48,0	0/0:8,0:8:14.63:0,15,175	0/0:23,0:23:60.13:0,60,683	0/0:4,0:4:12.02:0,12,137	0/0:26,0:26:69.86:0,70,716	0/0:28,0:28:67.27:0,67,748	0/0:16,0:16:45.12:0,45,563	0/0:18,0:18:45.13:0,45,578	0/0:21,0:21:54.98:0,55,646	0/0:37,0:37:91.75:0,92,1067	0/0:27,0:27:68.01:0,68,823	1/1:1,19:21:60.10:714,60,0	1/1:1,7:8:21.76:204,22,0	1/1:2,32:35:51.77:640,52,0	0/0:11,0:11:23.46:0,23,253	0/0:12,0:12:31.30:0,31,355	0/0:18,0:18:45.10:0,45,532	0/0:15,0:15:42.09:0,42,482	0/0:18,0:18:48.06:0,48,540	1/1:0,19:21:51.07:609,51,0	0/0:13,0:13:34.16:0,34,358
chr10	107225211	.	CAGAG	C	354.65	PASS	AB=0.932;AC=13;AF=0.310;AN=42;BaseQRankSum=1.488;DP=525;FS=24.748;HRun=0;HaplotypeScore=85.7488;InbreedingCoeff=-0.0319;MQ=69.93;MQ0=13;MQRankSum=0.960;QD=1.66;ReadPosRankSum=0.433;VQSLOD=0.1001;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:37:24.52:25,0,88	0/0:13,0:13:9.03:0,9,173	./.	./.	./.	0/1:14,0:14:13.27:21,0,13	0/1:7,1:8:17.26:40,0,17	0/0:23,0:22:1.72:0,2,4	0/0:11,1:12:2.74:0,3,12	0/0:15,0:15:6.07:0,6,36	./.	0/1:26,0:27:69.97:70,0,145	0/1:22,2:25:37.34:37,0,45	0/1:16,2:19:3.43:83,0,3	1/1:16,0:17:2.81:27,3,0	1/1:15,0:16:3:28,3,0	0/0:23,0:24:2.74:0,3,12	1/1:15,2:17:6.01:74,6,0	0/0:16,0:16:3.01:0,3,67	0/0:13,0:13:6.02:0,6,107	0/0:27,0:26:12.04:0,12,220	./.	./.	0/1:29,1:32:34.58:75,0,35	0/0:10,0:11:2.74:0,3,12	0/0:10,0:10:2.96:0,3,19	0/0:11,0:11:9.03:0,9,151	./.
chr10	107225333	.	GA	G	459.41	PASS	AB=0.964;AC=3;AF=0.054;AN=56;BaseQRankSum=6.781;DP=598;FS=0.000;HRun=10;HaplotypeScore=64.0130;InbreedingCoeff=0.5298;MQ=77.88;MQ0=0;MQRankSum=2.190;QD=8.83;ReadPosRankSum=-0.431;VQSLOD=1.9633;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,111,1216	0/0:2,0:5:11.23:0,11,54	0/1:26,1:20:44.44:44,0,198	0/0:21,1:16:1.25:0,1,160	0/0:12,0:13:23.10:0,23,283	0/0:21,0:21:54.13:0,54,587	0/0:25,0:25:60.14:0,60,652	0/0:27,0:27:63.06:0,63,660	0/0:10,0:10:29.95:0,30,311	0/0:23,0:23:66.18:0,66,730	0/0:17,0:17:31.28:0,31,421	1/1:3,22:25:59.83:521,60,0	0/0:25,0:25:69.18:0,69,756	0/0:21,0:21:60.15:0,60,656	0/0:23,0:23:63.17:0,63,697	0/0:19,1:20:19.07:0,19,439	0/0:20,0:21:56.99:0,57,611	0/0:18,0:17:45.10:0,45,488	0/0:24,0:23:57.15:0,57,628	0/0:15,1:17:21.90:0,22,445	0/0:35,0:35:99:0,99,1085	0/0:12,0:12:30.08:0,30,332	0/0:15,0:15:13.05:0,13,365	0/0:22,0:22:51.14:0,51,564	0/0:22,0:22:63.17:0,63,696	0/0:28,0:28:66.17:0,66,723	0/0:26,0:26:63.17:0,63,696	0/0:11,0:11:30.03:0,30,304
chr10	107231888	.	CCTGT	C	1132.64	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.414;DP=787;FS=0.714;HRun=0;HaplotypeScore=133.9442;InbreedingCoeff=0.9605;MQ=62.16;MQ0=3;MQRankSum=2.469;QD=26.97;ReadPosRankSum=2.469;VQSLOD=3.7767;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:81.25:0,81,1691	1/1:2,6:8:18.06:289,18,0	0/0:34,0:29:39.05:0,39,742	0/0:33,0:28:39.10:0,39,727	0/0:23,0:22:19.11:0,19,840	0/0:22,0:22:39.09:0,39,795	0/0:32,0:32:63.18:0,63,1372	0/0:41,0:40:72.18:0,72,1144	0/0:20,0:20:42.14:0,42,1008	0/0:27,0:26:57.03:0,57,1048	0/0:16,0:16:36.05:0,36,521	1/1:9,25:34:60.20:963,60,0	0/0:22,0:22:45.14:0,45,1030	0/0:29,0:29:51.08:0,51,1021	0/0:58,1:59:84.23:0,84,2747	0/0:28,0:28:54.16:0,54,1204	0/0:39,0:38:78.25:0,78,1765	0/0:35,0:35:69.22:0,69,1589	0/0:19,0:19:20.87:0,21,196	0/0:12,0:28:22.81:0,23,276	0/0:33,0:50:9.47:0,9,101	0/0:20,0:20:30.03:0,30,461	0/0:22,0:22:51.09:0,51,872	0/0:26,0:26:45.14:0,45,1007	0/0:10,0:10:30.09:0,30,653	0/0:28,0:28:60.11:0,60,1060	0/0:10,0:25:23.97:0,24,367	0/0:12,0:12:27.09:0,27,641
chr10	107232489	.	GT	G	118.84	PASS	AB=0.844;AC=7;AF=0.125;AN=56;BaseQRankSum=3.516;DP=659;FS=2.790;HRun=14;HaplotypeScore=89.3367;InbreedingCoeff=-0.1503;MQ=68.08;MQ0=3;MQRankSum=-0.659;QD=0.65;ReadPosRankSum=2.348;VQSLOD=-0.6347;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,4:34:23.37:23,0,394	0/0:8,0:9:11.01:0,11,66	0/1:37,0:18:4.09:4,0,112	0/0:24,0:19:3.99:0,4,34	0/0:33,1:35:41.95:0,42,464	0/0:18,0:18:44.32:0,44,381	0/0:21,0:21:24.85:0,25,310	0/0:37,0:39:52.13:0,52,547	0/0:18,0:18:20.94:0,21,311	0/0:28,0:28:44.90:0,45,395	0/0:20,0:21:42.19:0,42,382	0/1:13,16:31:49.25:106,0,49	0/0:19,0:19:20.35:0,20,268	0/0:16,0:18:36.09:0,36,278	0/0:23,1:25:32.68:0,33,398	0/0:25,0:26:60.60:0,61,522	0/0:17,0:20:18.11:0,18,274	0/1:21,4:26:21.79:22,0,285	0/1:20,4:25:31.48:31,0,286	0/1:21,5:26:46.84:47,0,305	0/0:8,0:9:15.12:0,15,90	0/0:18,0:21:44.76:0,45,374	0/0:12,2:14:6.43:0,6,195	0/0:19,1:20:29.14:0,29,387	0/0:22,3:25:8.33:0,8,326	0/0:28,0:37:87.50:0,87,720	0/0:27,0:28:62.85:0,63,544	0/1:4,1:5:8.38:8,0,47
chr10	107236960	.	GGCAGGGGCAGGGGCAGGGGCAGGA	G	503.12	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.714;DP=325;FS=0.000;HRun=0;HaplotypeScore=187.9484;InbreedingCoeff=0.5351;MQ=66.77;MQ0=0;MQRankSum=-1.695;QD=62.89;ReadPosRankSum=0.461;VQSLOD=2.9641;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:27.09:0,27,2356	1/1:3,5:8:9.03:586,9,0	0/0:5,0:4:6.02:0,6,320	0/0:14,0:14:27.95:0,28,2014	0/0:7,0:7:12.04:0,12,815	0/0:4,0:4:9.03:0,9,902	0/0:25,0:25:66.23:0,66,5533	0/0:14,0:14:33.11:0,33,2401	0/0:12,0:12:36.12:0,36,3388	0/0:8,0:8:18.06:0,18,1287	0/0:3,0:3:9.03:0,9,731	0/0:24,0:24:66.19:0,66,5842	0/0:8,0:8:24.08:0,24,1648	0/0:19,0:19:54.15:0,54,4273	0/0:15,0:15:36.12:0,36,3424	0/0:8,0:8:24.08:0,24,2035	0/0:29,0:29:84.20:0,84,6160	0/0:14,0:14:36.11:0,36,2978	0/0:13,0:12:30.10:0,30,1968	0/0:3,0:3:6.02:0,6,554	0/0:37,0:37:99:0,108,7682	0/0:3,0:3:9.03:0,9,608	0/0:3,0:3:9.03:0,9,694	0/0:11,0:11:33.11:0,33,3101	0/0:10,0:10:27.09:0,27,2205	0/0:7,0:7:21.07:0,21,1836	0/0:1,0:1:3.01:0,3,302	0/0:10,0:10:27.09:0,27,2229
chr10	107238445	.	CTG	C	109.53	PASS	AB=0.900;AC=10;AF=0.185;AN=54;BaseQRankSum=2.497;DP=644;FS=1.167;HRun=0;HaplotypeScore=85.4351;InbreedingCoeff=-0.0462;MQ=61.91;MQ0=52;MQRankSum=-0.355;QD=0.64;ReadPosRankSum=-0.902;VQSLOD=1.5705;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:12.04:0,12,169	1/1:6,0:9:8.67:51,9,0	./.	0/0:76,0:19:0.47:0,0,1	0/0:14,0:14:17.95:0,18,240	0/1:11,3:14:17.70:18,0,130	0/0:33,0:32:27.07:0,27,380	0/0:28,0:26:15.04:0,15,180	0/0:12,0:13:21.06:0,21,289	0/0:16,0:16:0.35:0,0,228	0/0:11,0:11:9.03:0,9,134	0/0:25,0:33:33.01:0,33,314	0/0:15,0:15:8.70:0,9,134	0/0:16,1:18:26.81:0,27,402	0/1:16,2:18:11.95:12,0,237	0/1:10,1:11:17.69:18,0,164	0/1:27,2:29:23.36:23,0,452	0/1:24,2:26:35.36:35,0,324	0/0:21,0:17:24.03:0,24,286	0/0:5,0:7:5.74:0,6,37	0/0:36,0:36:8.18:0,8,76	0/0:9,0:8:7.74:0,8,105	0/0:13,0:13:9.03:0,9,128	0/1:29,4:32:20.31:20,0,509	0/0:8,0:10:9:0,9,78	0/1:19,0:19:17.65:18,0,150	0/0:20,0:21:20.38:0,20,211	0/1:9,3:12:53.42:53,0,77
chr10	107238517	.	AT	A	1390.32	PASS	AB=0.846;AC=15;AF=0.268;AN=56;BaseQRankSum=6.274;DP=443;FS=0.489;HRun=12;HaplotypeScore=63.8559;InbreedingCoeff=0.7910;MQ=69.23;MQ0=0;MQRankSum=-0.440;QD=11.12;ReadPosRankSum=-0.266;VQSLOD=3.0112;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:42.06:0,42,414	1/1:1,7:8:14.93:116,15,0	0/0:13,0:14:2.38:0,2,78	0/0:13,0:12:23.83:0,24,222	0/0:19,1:20:19.27:0,19,358	0/0:19,0:19:36.07:0,36,366	0/0:19,0:19:42.06:0,42,415	1/1:10,11:21:29.79:231,30,0	0/0:12,0:12:30.06:0,30,304	0/0:18,0:18:33.06:0,33,331	0/0:12,0:12:19.39:0,19,185	1/1:4,19:23:50.80:395,51,0	0/0:10,0:10:15.02:0,15,147	0/0:15,1:16:3.82:0,4,214	0/0:18,0:18:42.07:0,42,415	0/0:11,1:12:6.81:0,7,246	0/0:15,3:18:0.81:0,1,190	0/0:19,0:19:48.08:0,48,481	1/1:10,12:23:36.89:265,37,0	1/1:2,13:15:32.86:255,33,0	1/1:5,9:14:17.57:135,18,0	0/1:9,2:11:19.44:19,0,175	0/0:15,1:16:30.49:0,30,292	0/0:16,0:16:27:0,27,256	0/0:12,0:12:18.03:0,18,178	0/0:19,1:21:21.66:0,22,377	1/1:2,7:10:22.94:168,23,0	0/0:11,0:11:30.02:0,30,295
chr10	107241109	.	T	TC	3179.41	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=5.762;DP=596;FS=2.823;HRun=2;HaplotypeScore=66.2723;InbreedingCoeff=0.9857;MQ=55.25;MQ0=19;MQRankSum=-8.160;QD=32.44;ReadPosRankSum=-3.476;VQSLOD=2.3789;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1557	0/0:16,0:16:39.13:0,39,531	./.	./.	0/0:30,0:30:81.26:0,81,1115	0/0:13,0:13:39.13:0,39,544	0/0:37,0:37:84.52:0,85,1441	1/1:6,18:19:54.18:862,54,0	0/0:19,0:19:54.18:0,54,755	0/0:18,0:17:51.17:0,51,713	0/0:11,0:11:33.11:0,33,460	0/0:22,0:22:57.18:0,57,777	0/0:15,0:15:45.15:0,45,629	0/0:23,0:23:66.22:0,66,920	0/0:26,0:26:78.21:0,78,1048	0/0:34,0:34:99:0,99,1368	0/0:42,0:40:99:0,120,1677	0/0:23,0:23:69.23:0,69,965	1/1:2,15:16:45.15:718,45,0	1/1:0,19:19:33.11:527,33,0	1/1:0,10:9:24.08:384,24,0	0/0:18,0:18:54.17:0,54,740	0/0:24,0:24:66.22:0,66,922	0/0:36,0:36:99:0,108,1472	0/0:18,0:17:54.17:0,54,740	0/0:16,0:16:45.14:0,45,614	1/1:2,26:28:54.18:861,54,0	0/0:3,0:3:9.03:0,9,126
chr10	107244773	.	TTCCC	T	351.99	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.792;DP=433;FS=1.330;HRun=0;HaplotypeScore=74.4003;InbreedingCoeff=0.7867;MQ=62.33;MQ0=1;MQRankSum=-0.324;QD=18.53;ReadPosRankSum=2.195;VQSLOD=3.3870;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:86.78:0,87,2079	0/0:8,0:8:15.05:0,15,375	0/0:9,0:7:6.02:0,6,126	0/0:22,0:18:30.82:0,31,479	0/0:8,0:8:18.06:0,18,416	0/0:11,0:11:24.08:0,24,535	0/0:18,0:18:36.11:0,36,824	0/0:20,0:19:24.08:0,24,516	0/0:15,0:15:33.10:0,33,767	0/0:12,0:12:30.10:0,30,710	0/0:7,0:7:9.03:0,9,203	1/1:1,18:19:27.03:446,27,0	0/0:19,0:19:42.08:0,42,802	0/0:11,0:11:27.09:0,27,664	0/0:15,0:15:30.10:0,30,725	0/0:14,0:14:24.08:0,24,576	0/0:22,0:22:48.16:0,48,1194	0/0:16,0:16:42.14:0,42,1010	0/0:14,0:14:12.04:0,12,271	0/0:13,0:13:36.12:0,36,815	0/0:28,0:28:69.20:0,69,1488	0/0:11,0:11:33.11:0,33,762	0/0:4,0:4:12.04:0,12,299	0/0:25,0:25:54.19:0,54,1291	0/0:16,0:16:42.14:0,42,996	0/0:14,0:14:21.05:0,21,427	0/0:13,0:13:33.11:0,33,792	0/0:13,0:13:21:0,21,351
chr10	107245255	.	A	AAG	9056.28	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-14.776;DP=794;FS=9.418;HRun=0;HaplotypeScore=94.2084;InbreedingCoeff=0.9999;MQ=69.90;MQ0=2;MQRankSum=-4.955;QD=47.17;ReadPosRankSum=-0.903;VQSLOD=5.3158;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,147,2085	1/1:0,11:11:33.11:604,33,0	0/0:35,0:23:46.69:0,47,585	0/0:56,0:46:38.08:0,38,1022	0/0:38,0:38:99:0,108,1540	0/0:25,0:25:66.21:0,66,927	0/0:35,0:35:99:0,99,1381	1/1:3,33:36:99:1696,99,0	0/0:21,0:21:60.07:0,60,831	0/0:29,0:29:87.29:0,87,1231	0/0:23,0:23:69.22:0,69,969	1/1:1,22:23:51.17:934,51,0	0/0:22,0:22:66.20:0,66,909	0/0:23,0:23:66.22:0,66,944	0/0:31,0:31:90.30:0,90,1286	0/0:22,0:22:60.18:0,60,826	0/0:22,0:22:60.20:0,60,857	0/0:28,0:28:75.21:0,75,1049	1/1:2,19:22:57.20:1037,57,0	1/1:1,23:23:60.21:1083,60,0	1/1:1,41:43:99:2089,114,0	0/0:28,0:28:78.26:0,78,1117	0/0:22,0:22:63.21:0,63,901	0/0:33,0:33:93.31:0,93,1332	0/0:19,0:19:48.16:0,48,685	0/0:24,0:24:66.21:0,66,930	1/1:1,31:33:90.24:1612,90,0	0/0:14,0:14:39.13:0,39,544
chr10	107246050	.	C	CT	575.18	PASS	AC=6;AF=0.136;AN=44;BaseQRankSum=-3.561;DP=72;FS=0.000;HRun=0;HaplotypeScore=11.7348;InbreedingCoeff=0.4809;MQ=62.22;MQ0=2;MQRankSum=-0.311;QD=28.76;ReadPosRankSum=0.844;VQSLOD=3.5563;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:1:3.01:0,3,41	./.	0/0:3,0:1:3.01:0,3,42	0/0:5,0:3:5.66:0,6,83	0/0:4,0:4:6.02:0,6,83	./.	0/0:6,0:6:14.78:0,15,177	1/1:0,4:4:12.04:189,12,0	0/0:2,0:2:5.99:0,6,63	0/0:3,0:3:6.01:0,6,71	./.	0/0:1,0:1:0:0,0,0	0/0:1,0:1:3.01:0,3,41	0/0:2,0:2:6.02:0,6,84	./.	0/0:2,0:2:3.01:0,3,42	0/0:4,0:4:12.01:0,12,147	0/0:4,0:4:12.04:0,12,163	1/1:1,4:5:14.06:173,14,0	0/0:1,0:1:3.01:0,3,37	1/1:0,11:11:21.07:335,21,0	./.	0/0:1,0:1:3.01:0,3,42	0/0:1,0:1:3.01:0,3,42	0/0:5,0:5:15.05:0,15,205	0/0:3,0:3:9.03:0,9,125	./.	0/0:3,0:3:9.03:0,9,125
chr10	107246210	.	TA	T	43.60	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=2.163;DP=321;FS=2.182;HRun=11;HaplotypeScore=32.9046;InbreedingCoeff=0.5841;MQ=71.00;MQ0=13;MQRankSum=-0.082;QD=6.23;ReadPosRankSum=0.558;VQSLOD=0.4522;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.14:0,72,737	1/1:0,4:4:11.99:98,12,0	0/0:81,2:17:1.51:0,2,35	0/0:57,2:21:24.74:0,25,166	0/0:9,0:9:27.05:0,27,277	0/0:9,0:9:24.04:0,24,245	0/0:7,0:7:18.02:0,18,175	0/0:12,0:12:36.03:0,36,350	0/0:2,0:2:6.01:0,6,63	0/0:5,0:5:15.02:0,15,148	0/0:5,0:5:12:0,12,117	1/1:1,2:3:5.99:49,6,0	0/0:3,0:3:9.01:0,9,87	0/0:5,0:5:15.04:0,15,158	0/0:3,0:3:9.01:0,9,87	0/0:5,0:6:17.86:0,18,165	0/0:12,0:14:38.89:0,39,377	0/0:14,0:16:41.91:0,42,415	0/0:11,0:12:8.30:0,8,256	0/0:7,0:7:18.03:0,18,182	0/0:5,0:5:14.99:0,15,139	./.	0/0:3,0:3:6:0,6,56	0/0:2,0:2:6.02:0,6,63	0/0:6,0:6:18.03:0,18,183	0/0:3,0:3:6:0,6,56	0/0:8,0:8:23.98:0,24,224	0/0:6,0:6:18.04:0,18,188
chr10	107246756	.	G	GT	39.54	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.579;DP=549;FS=0.000;HRun=0;HaplotypeScore=60.8406;InbreedingCoeff=0.9317;MQ=90.07;MQ0=0;MQRankSum=-0.897;QD=9.89;ReadPosRankSum=0.702;VQSLOD=3.5957;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.24:0,81,1099	1/1:0,4:4:9.03:123,9,0	0/0:24,0:24:69.22:0,69,927	0/0:34,0:33:86.67:0,87,1109	0/0:12,0:12:30.10:0,30,419	0/0:18,0:18:54.18:0,54,754	0/0:21,0:21:63.21:0,63,880	0/0:24,0:24:72.23:0,72,991	0/0:11,0:11:33.10:0,33,445	0/0:9,0:9:27.08:0,27,362	0/0:9,0:9:27.09:0,27,378	0/0:16,0:16:48.16:0,48,671	0/0:20,0:20:60.19:0,60,822	0/0:16,0:16:48.15:0,48,652	0/0:26,0:26:78:0,78,1060	0/0:22,0:22:63.21:0,63,881	0/0:35,0:35:99:0,105,1463	0/0:20,0:20:57.15:0,57,774	0/0:20,0:20:60.18:0,60,810	0/0:7,0:7:21.06:0,21,277	0/0:50,0:50:99:0,147,2054	0/0:15,0:15:45.13:0,45,599	0/0:10,0:10:30.09:0,30,398	0/0:29,0:29:87.29:0,87,1217	0/0:13,0:13:39.09:0,39,507	0/0:15,0:15:45.15:0,45,629	0/0:27,0:27:78.26:0,78,1090	0/0:14,0:14:42.11:0,42,551
chr10	107248482	.	T	TCTC	9115.27	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-12.418;DP=609;FS=4.921;HRun=0;HaplotypeScore=81.5638;InbreedingCoeff=0.9963;MQ=82.59;MQ0=2;MQRankSum=-6.172;QD=55.24;ReadPosRankSum=-0.052;VQSLOD=6.7717;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,150,2401	1/1:1,4:6:15.05:335,15,0	0/0:15,0:15:45.12:0,45,678	0/0:20,0:20:51.17:0,51,796	0/0:20,0:20:60.19:0,60,973	0/0:23,0:23:63.22:0,63,1046	0/0:32,0:32:93.30:0,93,1512	1/1:3,27:31:90.28:1971,90,0	0/0:17,0:17:51.16:0,51,823	0/0:23,0:23:57.19:0,57,937	0/0:16,0:16:48.16:0,48,798	1/1:3,17:21:51.17:1116,51,0	0/0:16,0:16:39.13:0,39,649	0/0:23,0:23:63.21:0,63,1037	0/0:21,0:21:63.21:0,63,1024	0/0:14,0:14:42.13:0,42,674	0/0:24,0:24:72.25:0,72,1199	0/0:26,0:26:69.23:0,69,1137	1/1:3,21:24:69.24:1561,69,0	1/1:4,18:23:45.15:1006,45,0	1/1:2,40:44:99:2311,102,0	0/0:12,0:12:24.07:0,24,377	0/0:19,0:19:54.17:0,54,872	0/0:18,0:18:48.16:0,48,800	0/0:24,0:24:69.23:0,69,1122	0/0:19,0:19:51.16:0,51,826	1/1:2,13:14:36.12:815,36,0	0/0:9,0:9:24.08:0,24,400
chr10	107253263	.	T	TGGG	669.28	PASS	AB=0.522;AC=1;AF=0.018;AN=56;BaseQRankSum=-2.460;DP=752;FS=2.430;HRun=1;HaplotypeScore=106.9468;InbreedingCoeff=0.0220;MQ=79.98;MQ0=0;MQRankSum=-1.954;QD=55.77;ReadPosRankSum=1.372;VQSLOD=4.0622;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,2519	0/1:1,11:12:16.80:744,0,17	0/0:22,0:22:51.13:0,51,814	0/0:16,0:17:30.61:0,31,583	0/0:20,0:20:60.18:0,60,1002	0/0:26,0:26:75.24:0,75,1290	0/0:35,0:35:99:0,102,1770	0/0:27,0:27:81.28:0,81,1422	0/0:31,0:31:93.32:0,93,1633	0/0:35,0:35:96.31:0,96,1644	0/0:11,0:11:30.09:0,30,502	0/0:35,0:35:99:0,102,1799	0/0:24,0:24:72.19:0,72,1182	0/0:28,0:28:84.27:0,84,1452	0/0:43,0:43:99:0,126,2216	0/0:33,0:33:90.31:0,90,1583	0/0:33,0:33:99:0,99,1732	0/0:22,0:22:66.20:0,66,1134	0/0:23,0:23:69.24:0,69,1207	0/0:13,0:13:39.13:0,39,679	0/0:46,0:46:99:0,135,2345	0/0:21,0:21:63.17:0,63,1078	0/0:16,0:16:48.16:0,48,843	0/0:39,0:39:99:0,111,1945	0/0:30,0:30:87.30:0,87,1535	0/0:27,0:27:81.27:0,81,1400	0/0:25,0:25:72.25:0,72,1257	0/0:8,0:8:24.08:0,24,423
chr10	107258260	.	T	TC	486.83	PASS	AB=0.786;AC=9;AF=0.161;AN=56;BaseQRankSum=-0.149;DP=572;FS=3.723;HRun=10;HaplotypeScore=63.4950;InbreedingCoeff=0.1582;MQ=71.30;MQ0=2;MQRankSum=0.518;QD=3.66;ReadPosRankSum=-1.697;VQSLOD=-0.3490;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:57.35:0,57,468	1/1:4,1:5:3.01:32,3,0	0/1:18,1:14:14.92:15,0,65	0/1:21,1:15:16.62:22,0,17	0/0:25,0:27:37.75:0,38,289	0/0:11,0:11:20.94:0,21,172	0/0:23,0:24:46.57:0,47,357	1/1:16,1:17:3.01:32,3,0	0/0:19,0:20:46.93:0,47,372	0/0:10,0:11:25.99:0,26,200	0/0:15,0:15:20.95:0,21,172	0/0:7,12:19:2.99:0,3,25	0/0:25,0:25:50.85:0,51,412	0/0:24,0:26:45.92:0,46,350	0/0:22,0:22:32.87:0,33,267	0/0:14,0:17:36.02:0,36,257	0/0:35,0:38:89.92:0,90,704	0/0:31,0:31:83.89:0,84,689	0/1:6,2:9:19.59:65,0,20	0/0:10,4:14:2.91:0,3,22	0/1:17,27:44:25.75:350,0,26	0/0:14,0:17:28:0,28,209	0/0:13,0:13:11.97:0,12,99	0/0:33,0:34:70.45:0,70,550	0/0:12,0:12:17.94:0,18,144	0/0:22,0:22:47.88:0,48,387	0/1:5,12:17:52.79:106,0,53	0/0:5,0:6:7.98:0,8,52
chr10	107260550	.	GGT	G	1626.36	PASS	AB=0.893;AC=28;AF=0.538;AN=52;BaseQRankSum=4.770;DP=724;FS=0.000;HRun=0;HaplotypeScore=104.3009;InbreedingCoeff=-0.1846;MQ=62.43;MQ0=17;MQRankSum=0.083;QD=2.97;ReadPosRankSum=1.511;VQSLOD=2.1538;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,7:43:23.37:23,0,455	1/1:6,0:10:5.68:28,6,0	./.	./.	0/1:18,1:18:56.07:56,0,164	0/1:16,0:14:8.45:8,0,139	0/1:22,6:27:11.77:12,0,207	0/0:33,0:32:3.02:0,3,7	0/0:20,6:26:12.41:0,12,588	0/1:23,2:24:16.63:17,0,128	0/1:11,3:14:17.93:18,0,103	1/1:18,0:25:5.68:28,6,0	0/1:22,0:24:36.82:37,0,177	1/1:21,0:29:9.78:43,10,0	0/1:16,3:19:26.48:26,0,363	0/1:17,4:23:68.16:68,0,259	0/1:36,9:44:99:145,0,372	0/0:26,1:37:0.25:0,0,278	1/1:19,2:18:5.95:51,6,0	1/1:9,4:13:12.03:131,12,0	1/1:68,4:76:89.46:751,89,0	0/1:20,1:20:15.64:16,0,223	0/0:11,0:11:12.03:0,12,159	0/1:36,1:39:76.12:76,0,319	0/1:16,3:19:8.70:9,0,250	0/1:22,1:22:53.58:54,0,84	1/1:7,6:14:20.72:192,21,0	0/0:20,0:20:21.02:0,21,281
chr10	107261578	.	AT	A	2136.46	PASS	AB=0.933;AC=13;AF=0.232;AN=56;BaseQRankSum=8.709;DP=529;FS=10.651;HRun=10;HaplotypeScore=58.9738;InbreedingCoeff=0.8876;MQ=75.92;MQ0=2;MQRankSum=-1.233;QD=16.56;ReadPosRankSum=-1.251;VQSLOD=2.8116;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,1:40:84.97:0,85,1129	0/0:7,0:7:21.06:0,21,232	0/1:25,2:23:18.78:19,0,393	0/0:22,0:20:38.55:0,39,381	0/0:30,1:31:61.16:0,61,884	0/0:18,0:18:51.13:0,51,556	0/0:22,0:22:60.16:0,60,664	1/1:2,24:26:74.94:642,75,0	0/0:16,0:16:48.08:0,48,502	0/0:28,0:28:69.17:0,69,750	0/0:15,0:15:33.08:0,33,358	1/1:0,13:13:38.99:339,39,0	0/0:18,0:18:48.09:0,48,510	0/0:9,0:9:27.07:0,27,299	0/0:12,1:13:10.03:0,10,329	0/0:11,0:11:32.92:0,33,346	0/0:27,0:27:78.13:0,78,814	0/0:30,0:30:67.74:0,68,812	1/1:2,20:23:59.45:494,59,0	1/1:0,13:13:35.99:313,36,0	1/1:0,8:8:21:182,21,0	0/0:13,0:13:39.11:0,39,431	0/0:12,0:12:30.08:0,30,332	0/0:17,0:17:48.12:0,48,523	0/0:22,1:23:31.08:0,31,561	0/0:21,0:23:53.81:0,54,553	1/1:3,15:18:38.85:338,39,0	0/0:5,0:5:15.04:0,15,166
chr10	107265860	.	C	CTCCTCT	55.28	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=2.210;DP=516;FS=6.277;HRun=0;HaplotypeScore=130.8165;InbreedingCoeff=0.4780;MQ=64.68;MQ0=6;MQRankSum=-0.846;QD=2.51;ReadPosRankSum=-2.807;VQSLOD=1.5393;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:73.93:0,74,920	0/0:4,0:4:6.02:0,6,115	0/0:27,0:19:20.92:0,21,183	0/1:12,0:8:13.97:15,0,14	0/0:19,0:18:20.46:0,20,189	0/0:18,0:18:42.01:0,42,491	0/0:25,0:25:42.01:0,42,630	0/0:35,0:33:62.66:0,63,709	0/0:12,0:12:30.06:0,30,500	0/0:19,0:19:32.99:0,33,411	0/0:8,0:7:8.49:0,8,90	1/1:3,7:10:6.02:132,6,0	0/0:12,0:12:23.98:0,24,322	0/0:18,0:18:41.77:0,42,665	0/0:16,0:16:33.04:0,33,552	0/0:14,0:14:30.08:0,30,536	0/0:32,0:32:65.58:0,66,1013	0/0:20,0:20:36.85:0,37,564	0/0:25,0:24:33.90:0,34,702	0/0:15,0:14:26.72:0,27,420	0/0:43,0:41:60:0,60,933	0/0:15,0:15:23.75:0,24,240	0/0:14,0:14:26.92:0,27,359	0/0:20,0:20:35.63:0,36,577	0/0:14,0:14:30.82:0,31,340	0/0:12,0:11:24.06:0,24,381	0/0:7,0:7:9.01:0,9,152	0/0:14,0:14:20.88:0,21,197
chr10	107269878	.	TCA	T	122.10	PASS	AB=0.931;AC=15;AF=0.278;AN=54;BaseQRankSum=5.495;DP=563;FS=8.503;HRun=0;HaplotypeScore=73.0386;InbreedingCoeff=-0.2646;MQ=66.67;MQ0=14;MQRankSum=-0.276;QD=0.45;ReadPosRankSum=-0.323;VQSLOD=0.4273;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:23.09:23,0,357	0/0:2,0:4:3:0,3,26	./.	0/0:30,0:7:0:0,0,0	0/1:11,0:11:0.42:0,0,87	0/0:22,0:24:6.91:0,7,209	0/1:29,0:31:1.19:1,0,218	0/0:15,0:15:8.95:0,9,79	0/1:17,2:19:8.90:9,0,247	0/1:18,0:18:14.74:15,0,181	0/1:11,1:13:61.94:62,0,96	0/0:16,0:16:1.51:0,2,23	0/1:20,4:24:26.82:27,0,371	0/1:19,0:18:17.79:18,0,164	0/1:16,1:17:8.88:9,0,267	0/0:17,1:18:0.11:0,0,366	0/1:19,1:21:7.97:8,0,431	0/0:28,0:28:29.85:0,30,510	0/0:13,0:12:11.96:0,12,114	0/0:11,0:10:14.96:0,15,155	0/0:34,0:47:9.92:0,10,222	0/0:14,0:14:12.01:0,12,139	0/1:11,1:12:23.93:24,0,60	0/0:23,0:23:3.92:0,4,189	0/1:19,4:21:35.84:36,0,303	0/1:24,3:27:13.68:14,0,148	0/0:16,0:20:15:0,15,147	1/1:3,0:3:2.68:11,3,0
chr10	107269918	.	A	ACACACC	207.26	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=4.082;DP=543;FS=0.000;HRun=0;HaplotypeScore=129.5765;InbreedingCoeff=0.4788;MQ=58.47;MQ0=5;MQRankSum=-4.302;QD=4.32;ReadPosRankSum=-4.134;VQSLOD=0.8559;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:70.26:0,70,816	1/1:2,0:2:3.01:77,3,0	0/0:31,0:19:50.86:0,51,495	0/0:28,0:16:37.86:0,38,393	0/1:11,0:11:44.19:44,0,154	0/0:17,0:17:15.03:0,15,418	0/0:25,0:25:62.88:0,63,687	0/0:21,0:21:20.77:0,21,359	0/0:18,0:18:44.82:0,45,546	0/0:18,0:18:44.88:0,45,518	0/0:10,0:10:10.99:0,11,302	1/1:4,17:23:10.50:194,10,0	0/0:19,0:19:35.78:0,36,629	0/0:16,0:16:44.81:0,45,572	0/0:19,0:19:46.98:0,47,604	0/0:15,0:15:42.04:0,42,662	0/0:25,0:25:23.68:0,24,929	0/0:24,0:24:59.97:0,60,963	0/0:27,0:27:9.07:0,9,519	0/1:12,0:11:10.73:11,0,111	0/0:47,0:47:98.82:0,99,914	0/0:8,0:8:15.86:0,16,219	0/0:7,0:7:11.94:0,12,119	0/0:28,0:28:58.19:0,58,765	0/0:23,0:22:35.53:0,36,523	0/0:25,0:25:47.57:0,48,513	0/0:10,0:10:25.88:0,26,171	0/0:4,0:4:8.98:0,9,73
chr10	107271673	.	GC	G	776.04	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.853;DP=551;FS=5.552;HRun=2;HaplotypeScore=58.6286;InbreedingCoeff=0.9900;MQ=73.61;MQ0=0;MQRankSum=-0.717;QD=28.74;ReadPosRankSum=2.017;VQSLOD=3.0278;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,129,1887	1/1:0,7:7:18.06:234,18,0	0/0:8,0:8:24.08:0,24,328	0/0:19,0:19:54:0,54,714	0/0:22,0:22:54.18:0,54,800	0/0:27,0:27:72.24:0,72,1079	0/0:16,0:16:48.16:0,48,719	0/0:28,0:27:81.27:0,81,1209	0/0:15,0:15:42.14:0,42,628	0/0:21,0:21:63.21:0,63,943	0/0:20,0:20:54.18:0,54,803	1/1:0,20:20:51.17:662,51,0	0/0:6,0:6:18.06:0,18,268	0/0:20,0:20:57.17:0,57,816	0/0:15,0:15:39.13:0,39,580	0/0:12,0:12:33.11:0,33,490	0/0:33,0:33:96.31:0,96,1418	0/0:23,0:23:66.21:0,66,969	0/0:17,0:17:45.14:0,45,643	0/0:15,0:15:42.14:0,42,629	0/0:31,0:31:90.30:0,90,1336	0/0:17,0:17:45.15:0,45,653	0/0:13,0:13:33.11:0,33,486	0/0:31,0:31:84.28:0,84,1259	0/0:10,0:10:30.01:0,30,384	0/0:23,0:22:69.21:0,69,1012	0/0:20,0:20:51:0,51,744	0/0:16,0:16:45.15:0,45,674
chr10	107271952	.	T	TGG	1038.92	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.597;DP=652;FS=0.000;HRun=0;HaplotypeScore=83.5119;InbreedingCoeff=0.9919;MQ=72.35;MQ0=0;MQRankSum=-8.479;QD=39.96;ReadPosRankSum=2.906;VQSLOD=5.5219;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,2028	0/0:17,0:17:48.16:0,48,775	0/0:10,0:10:24.06:0,24,366	0/0:11,0:11:30.06:0,30,441	0/0:14,0:14:39.13:0,39,636	0/0:20,0:20:57.19:0,57,930	0/0:35,0:35:99:0,105,1637	0/0:22,0:22:60.20:0,60,956	0/0:44,0:44:99:0,132,2126	0/0:10,0:10:30.10:0,30,489	0/0:13,0:13:36.12:0,36,577	1/1:0,26:26:78.26:1134,78,0	0/0:24,0:24:72.25:0,72,1175	0/0:28,0:28:84.27:0,84,1344	0/0:32,0:32:96.33:0,96,1563	0/0:17,0:17:51.16:0,51,808	0/0:32,0:32:96.31:0,96,1541	0/0:18,0:18:51.17:0,51,832	0/0:22,0:22:66.23:0,66,1074	0/0:8,0:8:21.07:0,21,340	0/0:76,0:76:99:0,223,3584	0/0:20,0:20:60.20:0,60,963	0/0:13,0:13:39.13:0,39,636	0/0:43,0:43:99:0,129,2105	0/0:16,0:16:42.14:0,42,685	0/0:10,0:10:30.10:0,30,490	0/0:18,0:18:54.17:0,54,852	0/0:11,0:11:33.09:0,33,512
chr10	107271959	.	A	AT	739.60	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.754;DP=660;FS=0.000;HRun=0;HaplotypeScore=76.1380;InbreedingCoeff=0.9918;MQ=74.23;MQ0=0;MQRankSum=-8.360;QD=25.50;ReadPosRankSum=1.694;VQSLOD=4.5753;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,1557	0/0:16,0:16:45.12:0,45,607	0/0:11,0:11:30.08:0,30,387	0/0:12,0:12:30.06:0,30,372	0/0:15,0:15:33.11:0,33,461	0/0:20,0:20:54.18:0,54,750	0/0:34,0:34:99:0,102,1425	0/0:19,0:19:54.18:0,54,754	0/0:45,0:45:99:0,135,1870	0/0:10,0:10:27.09:0,27,378	0/0:12,0:12:33.09:0,33,443	1/1:0,29:29:81.17:834,81,0	0/0:22,0:22:66.22:0,66,922	0/0:27,0:27:81.27:0,81,1132	0/0:31,0:31:90.30:0,90,1256	0/0:16,0:16:48.16:0,48,669	0/0:33,0:33:93.31:0,93,1298	0/0:21,0:21:63.21:0,63,877	0/0:23,0:23:60.20:0,60,838	0/0:10,0:10:27.09:0,27,370	0/0:79,0:79:99:0,232,3159	0/0:22,0:22:60.19:0,60,811	0/0:12,0:12:36.12:0,36,488	0/0:46,0:46:99:0,138,1891	0/0:16,0:16:41.98:0,42,526	0/0:11,0:11:30.10:0,30,420	0/0:19,0:19:57.17:0,57,778	0/0:8,0:8:21.07:0,21,294
chr10	107272089	.	C	CG	773.18	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.200;DP=649;FS=1.750;HRun=5;HaplotypeScore=66.8131;InbreedingCoeff=0.9860;MQ=80.09;MQ0=0;MQRankSum=-2.222;QD=27.61;ReadPosRankSum=1.645;VQSLOD=3.9594;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,1062	0/0:8,0:8:24.06:0,24,258	0/0:17,0:17:38.83:0,39,397	0/0:18,0:18:33.94:0,34,275	0/0:24,0:24:48.12:0,48,514	0/0:13,0:13:36.09:0,36,387	0/0:27,0:27:72.15:0,72,763	0/0:14,0:14:33.08:0,33,353	0/0:37,0:37:99:0,102,1095	0/0:17,0:17:33.08:0,33,355	0/0:10,0:10:18.04:0,18,193	1/1:2,26:28:66.21:868,66,0	0/0:23,0:23:66.16:0,66,708	0/0:29,0:29:75.18:0,75,800	0/0:36,0:36:87.21:0,87,934	0/0:30,0:30:90.16:0,90,939	0/0:31,0:31:87.22:0,87,934	0/0:29,0:29:78.19:0,78,837	0/0:18,0:18:48.10:0,48,507	0/0:11,0:11:30.07:0,30,322	0/0:58,0:58:99:0,147,1579	0/0:13,0:13:36.09:0,36,385	0/0:14,0:14:30.07:0,30,322	0/0:29,0:29:81.18:0,81,860	0/0:22,0:22:57.10:0,57,599	0/0:17,0:17:39.08:0,39,412	0/0:29,0:29:81.20:0,81,870	0/0:10,0:10:24.06:0,24,258
chr10	107272811	.	TA	T	803.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.712;DP=670;FS=0.764;HRun=4;HaplotypeScore=64.7531;InbreedingCoeff=0.9034;MQ=88.99;MQ0=0;MQRankSum=-2.407;QD=30.89;ReadPosRankSum=1.068;VQSLOD=4.0188;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1522	0/0:8,0:8:24.08:0,24,336	0/0:31,0:31:71.85:0,72,899	0/0:20,0:19:48.12:0,48,631	0/0:16,0:16:45.13:0,45,597	0/0:20,0:20:60.18:0,60,809	0/0:25,0:25:75.24:0,75,1032	0/0:34,0:34:96.31:0,96,1316	0/0:22,0:22:60.18:0,60,821	0/0:30,0:30:81.27:0,81,1134	0/0:19,0:19:51.16:0,51,693	1/1:0,26:26:75.23:898,75,0	0/0:16,0:16:48.14:0,48,653	0/0:24,0:24:69.23:0,69,965	0/0:26,0:26:78.25:0,78,1075	0/0:27,0:27:78.25:0,78,1076	0/0:33,0:33:96.29:0,96,1324	0/0:23,0:22:66.20:0,66,905	0/0:23,0:23:69.20:0,69,931	0/0:20,0:20:57.19:0,57,798	0/0:36,0:36:99:0,108,1476	0/0:15,0:15:33.11:0,33,462	0/0:18,0:18:51.17:0,51,713	0/0:29,0:29:81.27:0,81,1134	0/0:21,0:21:60.18:0,60,807	0/0:31,0:31:90.26:0,90,1209	0/0:36,0:36:93.31:0,93,1299	0/0:2,0:2:6.02:0,6,84
chr10	107274712	.	AC	A	1351.91	PASS	AB=0.750;AC=42;AF=0.913;AN=46;BaseQRankSum=-2.328;DP=72;FS=24.988;HRun=3;HaplotypeScore=28.1977;InbreedingCoeff=0.1964;MQ=78.84;MQ0=1;MQRankSum=-2.887;QD=20.18;ReadPosRankSum=2.514;VQSLOD=1.8249;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:6.02:72,6,0	1/1:0,1:1:3.01:36,3,0	0/1:7,0:4:1.03:1,0,10	0/0:5,0:5:6.02:0,6,70	0/1:0,4:4:0:0,0,0	1/1:0,5:5:12.04:145,12,0	1/1:0,5:5:15.05:181,15,0	1/1:0,5:5:15.05:185,15,0	1/1:0,2:2:3.01:36,3,0	1/1:0,1:1:3.01:37,3,0	./.	1/1:0,3:3:9.03:108,9,0	1/1:0,1:1:3.01:36,3,0	1/1:0,3:3:3.01:36,3,0	1/1:0,2:2:6.02:72,6,0	1/1:0,2:2:6.02:70,6,0	./.	1/1:0,1:1:3.01:37,3,0	1/1:0,2:2:3.01:37,3,0	1/1:0,1:1:3.01:36,3,0	1/1:1,6:7:3.01:36,3,0	1/1:0,3:3:9.03:108,9,0	./.	1/1:0,5:5:6.02:71,6,0	./.	1/1:0,1:1:3.01:37,3,0	1/1:0,3:3:6.01:72,6,0	./.
chr10	107276054	.	CT	C	714.55	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=2.135;DP=280;FS=15.549;HRun=8;HaplotypeScore=30.6276;InbreedingCoeff=0.7168;MQ=50.11;MQ0=13;MQRankSum=-3.365;QD=14.01;ReadPosRankSum=-0.891;VQSLOD=1.2807;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:27.08:0,27,326	0/0:1,0:1:2.90:0,3,16	0/0:13,0:5:3.47:0,3,26	0/0:11,0:5:5.14:0,5,23	0/0:10,0:10:18.01:0,18,197	0/0:8,0:7:15:0,15,165	0/0:24,0:23:44.94:0,45,462	1/1:4,9:10:26.84:245,27,0	0/0:12,0:9:12.04:0,12,145	0/0:10,0:10:24.06:0,24,278	0/0:7,0:6:6.02:0,6,73	1/1:5,5:9:14.85:145,15,0	0/0:10,0:9:15.05:0,15,181	0/0:8,0:7:12.04:0,12,145	0/0:7,0:7:12.04:0,12,145	0/0:4,0:3:6.02:0,6,72	0/0:10,0:12:11.99:0,12,129	0/0:11,0:11:27.04:0,27,299	1/1:2,10:11:30.05:289,30,0	1/1:1,3:4:3:29,3,0	1/1:3,3:4:6.01:58,6,0	0/0:7,0:6:12.04:0,12,145	0/0:4,0:4:6.02:0,6,72	0/0:26,0:24:54.15:0,54,638	0/0:6,0:6:9:0,9,95	0/0:12,0:12:24.07:0,24,290	1/1:1,5:6:12.02:116,12,0	0/0:5,0:3:3.01:0,3,36
chr10	107277755	.	AAC	A	1063.38	PASS	AB=0.961;AC=29;AF=0.537;AN=54;BaseQRankSum=6.093;DP=464;FS=7.347;HRun=0;HaplotypeScore=70.9527;InbreedingCoeff=-0.2415;MQ=66.93;MQ0=8;MQRankSum=-0.087;QD=3.07;ReadPosRankSum=0.645;VQSLOD=0.9984;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,1:27:59:59,0,256	1/1:7,3:10:8.96:83,9,0	0/0:21,0:10:0.47:0,0,1	./.	0/1:19,2:21:24.48:24,0,338	0/1:13,1:14:13.13:13,0,157	0/1:25,0:23:5.63:6,0,254	1/1:16,0:16:3.01:32,3,0	0/0:15,0:15:12.01:0,12,148	0/1:15,0:15:61.50:62,0,309	0/0:16,0:17:0.98:0,1,206	1/1:8,0:14:14.20:70,14,0	0/1:10,2:12:91.82:92,0,126	0/0:15,0:15:17.91:0,18,192	0/1:16,0:16:17.53:18,0,162	0/1:14,0:14:12.37:12,0,233	0/1:12,0:12:26.71:27,0,39	0/0:17,0:18:2.27:0,2,342	1/1:4,0:4:3.01:33,3,0	1/1:5,8:13:23.88:229,24,0	1/1:24,0:24:18.05:196,18,0	0/1:16,0:16:12.67:13,0,189	0/1:14,0:14:20.54:21,0,119	0/1:22,1:22:68.68:69,0,205	0/1:11,0:10:23.60:24,0,74	0/1:17,0:17:19.53:20,0,142	1/1:4,8:13:11.43:111,11,0	0/1:12,0:12:10.61:11,0,100
chr10	107277940	.	TTG	T	795.92	PASS	AB=0.916;AC=18;AF=0.321;AN=56;BaseQRankSum=9.038;DP=910;FS=3.263;HRun=0;HaplotypeScore=131.5796;InbreedingCoeff=-0.2001;MQ=58.20;MQ0=11;MQRankSum=0.019;QD=1.50;ReadPosRankSum=1.738;VQSLOD=2.1658;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,2:54:36.94:0,37,1319	1/1:6,0:13:11.36:56,11,0	0/0:29,0:11:2.90:0,3,16	0/0:36,0:17:14.45:0,14,112	0/1:22,0:23:18.89:19,0,316	0/1:21,0:21:40.09:40,0,344	0/0:27,6:33:3.81:0,4,641	0/1:37,2:39:47.90:48,0,742	0/0:28,1:29:19.06:0,19,746	0/1:34,6:40:99:100,0,838	0/0:22,1:23:8.30:0,8,478	1/1:11,0:35:34.09:168,34,0	0/1:36,3:41:36.89:37,0,1107	0/1:32,2:37:2.87:3,0,974	0/0:37,1:40:17.34:0,17,1115	0/1:37,5:42:96.72:97,0,902	0/1:21,4:25:47.85:48,0,652	0/0:24,0:25:49.45:0,49,831	0/0:19,1:19:7:0,7,493	0/0:24,1:25:13.12:0,13,636	0/1:66,3:69:88.79:89,0,1291	0/1:29,3:33:30.95:31,0,834	0/0:13,0:14:3.59:0,4,387	0/0:51,0:50:48.36:0,48,1430	0/1:21,3:24:59.86:60,0,483	0/1:40,1:41:66.16:66,0,937	0/1:26,6:32:79.75:80,0,678	0/1:12,1:13:19.97:20,0,149
chr10	107278211	.	A	AGT	1207.99	PASS	AB=0.868;AC=5;AF=0.089;AN=56;BaseQRankSum=-5.692;DP=1008;FS=8.813;HRun=0;HaplotypeScore=154.5844;InbreedingCoeff=0.4043;MQ=56.22;MQ0=6;MQRankSum=-0.313;QD=8.11;ReadPosRankSum=-0.118;VQSLOD=2.7827;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:67,0:68:99:0,111,1136	0/0:12,0:12:29.86:0,30,303	0/0:33,0:10:9.02:0,9,98	0/0:42,0:20:9.02:0,9,101	0/0:24,0:24:35.46:0,35,365	0/0:29,1:30:5.27:0,5,451	0/0:30,0:31:25.40:0,25,434	0/1:48,3:51:54.06:54,0,430	0/0:34,1:36:26.23:0,26,701	0/0:36,0:37:47.96:0,48,514	0/0:26,0:26:39.11:0,39,432	0/1:13,11:25:0.67:412,0,1	0/0:46,0:47:62.08:0,62,878	0/0:45,0:49:77.87:0,78,829	1/1:22,27:50:18.11:845,18,0	0/0:37,0:38:89.82:0,90,910	0/0:23,0:25:50.94:0,51,532	0/0:20,0:21:5.92:0,6,229	0/0:22,0:21:36.09:0,36,396	0/0:23,0:23:38.79:0,39,375	0/0:112,0:113:99:0,162,1731	0/0:27,0:28:27.31:0,27,278	0/1:22,0:21:18.73:19,0,236	0/0:45,0:46:63.12:0,63,901	0/0:26,0:28:47.96:0,48,513	0/0:37,0:37:51.12:0,51,558	0/0:34,0:35:63.17:0,63,698	0/0:7,0:7:12.02:0,12,126
chr10	107280064	.	CGT	C	5298.37	PASS	AB=0.888;AC=28;AF=0.500;AN=56;BaseQRankSum=6.557;DP=624;FS=1.959;HRun=0;HaplotypeScore=86.7401;InbreedingCoeff=0.6539;MQ=63.37;MQ0=13;MQRankSum=2.717;QD=14.56;ReadPosRankSum=3.562;VQSLOD=4.2734;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,18:36:56.82:612,57,0	0/0:7,0:6:5.99:0,6,48	0/1:20,0:14:8.12:8,0,131	0/0:30,0:15:14.63:0,15,177	1/1:10,9:21:38.69:376,39,0	1/1:13,10:23:30.08:344,30,0	1/1:8,13:23:38.77:406,39,0	0/0:23,0:18:20.88:0,21,177	0/0:22,0:21:45.09:0,45,650	0/0:19,0:20:18.98:0,19,406	0/0:25,1:26:1.42:0,1,342	0/1:18,1:20:25.33:25,0,40	1/1:8,8:16:14.64:171,15,0	1/1:5,5:11:17.88:186,18,0	1/1:7,16:23:42.12:480,42,0	0/0:18,1:19:13.82:0,14,661	1/1:11,38:49:75.09:960,75,0	1/1:9,21:29:57.01:641,57,0	0/0:29,0:28:29.37:0,29,240	0/0:18,0:16:14.94:0,15,118	0/0:18,0:17:9:0,9,90	1/1:3,7:11:14.84:152,15,0	1/1:7,7:14:15.04:172,15,0	1/1:9,28:35:60.17:686,60,0	0/1:20,3:23:20.52:21,0,577	0/0:27,0:27:28.30:0,28,645	0/0:21,0:21:17.80:0,18,126	0/1:3,2:5:37.20:60,0,37
chr10	107281743	.	ATACTGTTTC	A	5716.40	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.062;DP=654;FS=6.301;HRun=0;HaplotypeScore=181.9046;InbreedingCoeff=0.9988;MQ=85.87;MQ0=0;MQRankSum=-11.151;QD=52.44;ReadPosRankSum=-0.615;VQSLOD=4.1281;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,150,6967	0/0:11,0:11:33.11:0,33,1626	0/0:22,0:23:69.24:0,69,3206	0/0:23,0:23:69.24:0,69,2787	0/0:20,0:20:60.19:0,60,2616	0/0:15,0:15:42.14:0,42,2083	0/0:28,0:28:84.27:0,84,3871	1/1:2,12:14:36.11:1023,36,0	0/0:27,0:27:81.28:0,81,4019	0/0:24,0:24:72.25:0,72,3434	0/0:19,0:19:57.20:0,57,2748	0/0:19,0:19:57.20:0,57,2828	0/0:23,0:23:69.24:0,69,3341	0/0:25,0:25:75.26:0,75,3571	0/0:43,0:43:99:0,129,6276	0/0:11,0:11:33.11:0,33,1637	0/0:50,0:50:99:0,150,6906	0/0:20,0:20:60.21:0,60,2965	1/1:4,12:16:36.09:962,36,0	1/1:2,17:19:42.14:1318,42,0	1/1:9,35:44:33.58:991,34,0	0/0:15,0:15:42.14:0,42,1981	0/0:13,0:13:39.13:0,39,1738	0/0:38,0:38:99:0,111,4594	0/0:20,0:20:60.18:0,60,2813	0/0:20,0:20:60.21:0,60,2979	1/1:0,16:16:45.15:1422,45,0	0/0:7,0:7:21.07:0,21,1033
chr10	107282536	.	G	GT	3633.24	PASS	AB=0.806;AC=16;AF=0.286;AN=56;BaseQRankSum=-8.417;DP=582;FS=2.807;HRun=9;HaplotypeScore=65.8884;InbreedingCoeff=0.8588;MQ=83.26;MQ0=1;MQRankSum=-0.186;QD=19.64;ReadPosRankSum=-0.763;VQSLOD=3.8313;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:19:41.91:432,42,0	0/1:4,0:11:5.91:66,0,6	0/1:31,0:29:6.33:6,0,232	0/0:24,0:21:29.15:0,29,275	0/0:19,0:19:47.99:0,48,417	0/0:24,1:25:32.80:0,33,514	0/0:17,0:17:47.99:0,48,417	1/1:5,21:26:63.13:683,63,0	0/0:17,0:17:47.99:0,48,417	0/0:26,0:26:62.95:0,63,540	0/0:13,0:13:35.97:0,36,308	1/1:1,13:14:30.08:329,30,0	0/0:11,0:11:23.97:0,24,208	0/0:22,0:22:62.99:0,63,547	0/0:16,0:16:44.96:0,45,383	0/0:31,0:31:86.98:0,87,755	0/0:25,0:25:59.96:0,60,517	0/0:33,0:33:86.92:0,87,743	1/1:4,14:18:39.07:412,39,0	1/1:1,25:26:72.16:775,72,0	1/1:3,18:21:48.13:531,48,0	0/0:15,0:15:32.99:0,33,286	0/0:16,0:16:44.95:0,45,384	0/0:26,0:26:53.98:0,54,468	0/0:19,0:19:53.43:0,53,441	0/0:23,0:23:62.96:0,63,541	1/1:3,16:19:36.10:398,36,0	0/0:19,0:19:50.99:0,51,443
chr10	107282795	.	GAA	G	2664.57	PASS	AB=0.900;AC=11;AF=0.196;AN=56;BaseQRankSum=8.558;DP=583;FS=2.507;HRun=11;HaplotypeScore=75.3683;InbreedingCoeff=0.8866;MQ=70.16;MQ0=0;MQRankSum=0.999;QD=23.17;ReadPosRankSum=-1.024;VQSLOD=3.2596;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:30:80.72:0,81,1148	0/0:0,0:13:32.44:0,32,111	0/0:19,0:17:26.87:0,27,311	0/1:8,0:7:31.99:32,0,120	0/0:26,0:31:77.69:0,78,1057	0/0:17,0:17:45.14:0,45,673	0/0:16,0:17:45.15:0,45,674	1/1:6,19:25:57.05:585,57,0	0/0:22,0:22:57.18:0,57,857	0/0:28,0:28:63.20:0,63,926	0/0:21,0:25:66.21:0,66,963	0/0:14,0:15:44.64:0,45,655	0/0:17,0:17:36.11:0,36,517	0/0:18,0:20:54.17:0,54,787	0/0:23,0:24:65.69:0,66,934	0/0:15,0:17:47.13:0,47,664	0/0:17,0:18:51.16:0,51,754	0/0:26,0:27:71.71:0,72,1027	1/1:4,20:24:57.07:598,57,0	1/1:1,20:21:54.12:575,54,0	1/1:2,15:17:45.11:479,45,0	0/0:21,0:21:45.15:0,45,690	0/0:30,0:30:84.21:0,84,1193	0/0:24,0:25:63.16:0,63,908	0/0:19,0:19:57.19:0,57,878	0/0:14,0:15:33.11:0,33,490	1/1:0,19:19:54.14:575,54,0	0/0:14,0:17:46.58:0,47,579
chr10	107283201	.	A	AT	2553.03	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-9.470;DP=457;FS=1.485;HRun=9;HaplotypeScore=48.3384;InbreedingCoeff=0.9564;MQ=73.70;MQ0=3;MQRankSum=-0.099;QD=25.03;ReadPosRankSum=-1.372;VQSLOD=3.8414;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:65.51:0,66,689	0/0:11,0:11:26.99:0,27,234	0/0:21,0:14:8.68:0,9,118	0/0:21,0:15:11.38:0,11,88	0/0:21,0:21:50.98:0,51,443	0/0:10,0:10:20.98:0,21,178	0/0:14,0:15:32.02:0,32,266	1/1:5,23:27:69.14:740,69,0	0/0:11,0:11:20.96:0,21,182	0/0:18,1:19:45.46:0,45,392	0/0:14,0:14:32.99:0,33,286	1/1:1,11:12:10.04:339,10,0	0/0:12,0:12:29.98:0,30,260	0/0:11,0:11:26.83:0,27,230	0/0:15,0:15:41.99:0,42,365	0/0:9,0:9:20.99:0,21,182	0/0:24,0:24:60.81:0,61,499	0/0:23,0:22:47.97:0,48,417	1/1:3,21:24:63.13:676,63,0	1/1:3,16:19:42.07:451,42,0	1/1:1,9:10:27.07:299,27,0	0/0:8,0:8:14.98:0,15,130	0/0:21,0:22:56.02:0,56,475	0/0:10,0:9:20.99:0,21,182	0/0:18,0:18:28.98:0,29,395	0/0:16,0:15:35.99:0,36,312	1/1:1,8:9:21.06:232,21,0	0/0:10,0:9:12:0,12,104
chr10	107285958	.	TTTTTTTTAA	T	2076.80	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=8.118;DP=353;FS=7.167;HRun=0;HaplotypeScore=98.1049;InbreedingCoeff=0.7850;MQ=64.50;MQ0=0;MQRankSum=-6.825;QD=30.10;ReadPosRankSum=-3.425;VQSLOD=1.4709;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.25:0,72,3244	0/0:3,0:3:6.02:0,6,277	0/0:23,0:14:29.30:0,29,706	0/0:14,0:4:8.23:0,8,102	0/0:18,0:18:45.63:0,46,1997	0/0:17,0:17:36.12:0,36,1554	0/0:4,0:4:3.01:0,3,139	1/1:8,15:23:48.05:981,48,0	0/0:6,0:6:12.04:0,12,554	0/0:12,0:12:30.10:0,30,1207	0/0:4,0:4:12.04:0,12,554	0/0:2,0:2:6.02:0,6,179	0/0:6,0:6:18.06:0,18,705	0/0:7,0:7:15.05:0,15,692	0/0:14,0:14:39.13:0,39,1558	0/0:8,0:8:24.08:0,24,1107	0/0:29,0:28:69.24:0,69,2769	0/0:14,0:13:33.11:0,33,1523	1/1:7,7:14:2.02:405,2,0	1/1:5,7:12:15.05:363,15,0	1/1:5,0:5:6.02:124,6,0	./.	0/0:6,0:6:9.03:0,9,416	0/0:7,0:7:15.05:0,15,693	0/0:19,0:19:48.16:0,48,2142	0/0:22,0:22:57.20:0,57,2529	1/1:8,7:15:15.01:358,15,0	0/0:21,0:21:57.67:0,58,2529
chr10	107286559	.	CTG	C	1270.63	PASS	AB=0.883;AC=22;AF=0.407;AN=54;BaseQRankSum=8.904;DP=625;FS=0.544;HRun=0;HaplotypeScore=81.6442;InbreedingCoeff=0.0019;MQ=67.70;MQ0=14;MQRankSum=-0.584;QD=3.36;ReadPosRankSum=0.888;VQSLOD=1.9266;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,2:31:27.25:27,0,592	1/1:1,2:3:6.02:66,6,0	./.	0/0:38,0:22:15.39:0,15,158	0/0:19,1:21:26.94:0,27,332	0/1:16,3:18:99:102,0,228	0/1:19,6:25:98.43:98,0,288	0/1:27,0:26:12.95:15,0,13	0/0:18,2:19:8.11:0,8,488	0/1:18,4:22:34.18:34,0,377	0/0:12,0:12:9.03:0,9,134	0/0:2,0:23:2.90:0,3,26	0/0:18,0:18:22.33:0,22,571	0/1:20,1:20:27.67:28,0,403	0/0:14,2:16:2.45:0,2,440	0/0:18,0:18:26.25:0,26,344	0/1:39,3:41:15.14:15,0,988	0/1:17,3:20:37.19:37,0,328	1/1:15,1:19:14.51:97,15,0	1/1:5,9:13:18.05:201,18,0	1/1:16,20:33:32.63:331,33,0	0/0:17,0:14:21:0,21,292	0/1:11,3:14:15.60:16,0,188	0/1:25,9:34:37.76:38,0,708	0/0:17,0:17:15.04:0,15,194	0/1:21,3:24:70.80:71,0,168	1/1:7,8:17:23.90:247,24,0	0/1:8,1:8:24.60:25,0,73
chr10	107286594	.	T	TAC	3110.28	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=1.025;DP=698;FS=2.013;HRun=0;HaplotypeScore=88.6094;InbreedingCoeff=0.9666;MQ=58.48;MQ0=27;MQRankSum=1.368;QD=27.05;ReadPosRankSum=-2.040;VQSLOD=4.3117;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,99,1272	1/1:4,0:4:8.98:102,9,0	0/0:83,0:22:50.95:0,51,589	0/0:83,0:30:53.12:0,53,828	0/0:20,0:20:32.30:0,32,435	0/0:21,0:20:51.09:0,51,622	0/0:25,0:25:60.16:0,60,745	1/1:4,23:27:25.08:963,25,0	0/0:22,0:21:54.12:0,54,676	0/0:23,0:23:57.18:0,57,749	0/0:10,0:10:12:0,12,142	0/0:21,0:21:16.60:0,17,198	0/0:16,0:16:45.15:0,45,609	0/0:20,0:19:51.12:0,51,640	0/0:19,0:19:51.15:0,51,667	0/0:18,0:18:51.17:0,51,695	0/0:35,0:34:87.27:0,87,1140	0/0:20,0:20:48.15:0,48,622	1/1:13,0:11:27.05:332,27,0	1/1:12,0:12:27.06:337,27,0	1/1:44,0:42:84.14:1173,84,0	0/0:18,0:18:39.13:0,39,525	0/0:13,0:13:27.08:0,27,354	0/0:38,0:39:92.08:0,92,1163	0/0:15,0:14:27.09:0,27,368	0/0:19,0:19:51.14:0,51,643	1/1:14,0:14:35.06:388,35,0	0/0:5,0:5:9.02:0,9,108
chr10	107290308	.	AG	A	601.82	PASS	AB=0.883;AC=8;AF=0.143;AN=56;BaseQRankSum=2.507;DP=472;FS=2.622;HRun=10;HaplotypeScore=58.0110;InbreedingCoeff=0.0334;MQ=71.91;MQ0=1;MQRankSum=-0.460;QD=4.74;ReadPosRankSum=1.316;VQSLOD=0.5402;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,2:29:9.80:0,10,529	0/0:4,0:4:8.93:0,9,73	0/0:11,0:10:11.56:0,12,124	0/0:12,0:11:8.26:0,8,56	0/1:12,0:12:6.21:6,0,148	0/0:16,0:16:8.51:0,9,296	0/0:29,0:29:69.14:0,69,735	0/0:20,1:22:13.90:0,14,322	0/0:20,0:20:40.64:0,41,441	0/0:11,1:12:1.01:0,1,234	0/0:10,0:10:10.93:0,11,131	1/1:5,18:24:62:521,62,0	0/1:14,3:17:33.04:33,0,342	0/0:9,0:9:21.05:0,21,225	0/0:15,0:15:16.02:0,16,379	0/0:17,0:17:37.59:0,38,380	0/1:22,5:27:53.83:54,0,590	0/0:20,2:22:5.04:0,5,509	0/0:19,0:18:42.08:0,42,445	0/0:12,0:12:9.02:0,9,99	0/0:25,1:25:19.42:0,19,487	0/1:6,3:9:51.35:63,0,51	0/0:15,1:16:2.94:0,3,236	0/0:24,0:24:45.07:0,45,469	0/1:19,1:20:11.41:11,0,295	0/0:9,0:9:24.05:0,24,256	0/1:15,2:17:48.18:48,0,183	0/0:10,1:11:4.01:0,4,263
chr10	107295065	.	AGTAT	A	4417.16	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.736;DP=627;FS=0.423;HRun=0;HaplotypeScore=104.2963;InbreedingCoeff=0.9973;MQ=74.17;MQ0=0;MQRankSum=-1.201;QD=35.34;ReadPosRankSum=-1.070;VQSLOD=4.7815;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,105,2163	0/0:11,0:11:27.09:0,27,667	0/0:27,0:26:45.13:0,45,1018	0/0:23,0:22:29.92:0,30,559	0/0:25,0:25:60.19:0,60,1400	0/0:17,0:17:42.14:0,42,1011	0/0:18,0:18:42.14:0,42,1019	1/1:11,22:33:63.17:959,63,0	0/0:31,0:31:84.27:0,84,2033	0/0:22,0:22:57.20:0,57,1394	0/0:12,0:12:30.10:0,30,747	0/0:20,0:20:45.15:0,45,1117	0/0:21,0:21:57.20:0,57,1386	0/0:21,0:21:57.20:0,57,1417	0/0:32,0:32:81.26:0,81,1966	0/0:32,0:32:75.26:0,75,1840	0/0:26,0:26:60.15:0,60,1339	0/0:17,0:17:45.13:0,45,1068	1/1:6,19:25:57.19:953,57,0	1/1:2,12:14:36.12:608,36,0	1/1:11,24:35:60.18:999,60,0	0/0:16,0:16:36.12:0,36,895	0/0:7,0:7:18.06:0,18,448	0/0:31,0:31:72.23:0,72,1710	0/0:19,0:18:54.19:0,54,1327	0/0:22,0:22:54.19:0,54,1311	1/1:0,17:18:54.18:898,54,0	0/0:12,0:12:27.09:0,27,661
chr10	107297953	.	GACAT	G	1042.76	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.337;DP=699;FS=7.510;HRun=0;HaplotypeScore=113.3076;InbreedingCoeff=0.9991;MQ=74.91;MQ0=0;MQRankSum=-3.023;QD=47.40;ReadPosRankSum=2.034;VQSLOD=4.4949;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,154,4097	0/0:12,0:12:33.11:0,33,867	0/0:11,0:11:30.10:0,30,801	0/0:15,0:15:42.04:0,42,1021	0/0:28,0:28:78.27:0,78,2102	0/0:24,0:24:60.21:0,60,1619	0/0:38,0:38:99:0,105,2738	0/0:33,0:33:90.30:0,90,2364	0/0:32,0:32:93.32:0,93,2505	0/0:26,0:26:69.20:0,69,1784	0/0:19,0:19:57.20:0,57,1480	1/1:0,22:22:60.21:1138,60,0	0/0:18,0:18:51.18:0,51,1364	0/0:18,0:18:54.19:0,54,1451	0/0:27,0:27:81.28:0,81,2148	0/0:19,0:19:54.19:0,54,1444	0/0:35,0:35:99:0,99,2661	0/0:27,0:27:75.26:0,75,1970	0/0:23,0:23:60.19:0,60,1538	0/0:21,0:21:63.22:0,63,1686	0/0:28,0:28:78.20:0,78,1955	0/0:14,0:14:39.13:0,39,1044	0/0:23,0:23:66.23:0,66,1775	0/0:39,0:39:99:0,114,3074	0/0:29,0:29:87.30:0,87,2310	0/0:22,0:22:60.21:0,60,1576	0/0:31,0:31:90.29:0,90,2367	0/0:14,0:14:42.14:0,42,1133
chr10	107298672	.	GGA	G	51.63	PASS	AB=0.881;AC=12;AF=0.286;AN=42;BaseQRankSum=3.449;DP=90;FS=23.109;HRun=0;HaplotypeScore=33.7786;InbreedingCoeff=-0.1022;MQ=62.40;MQ0=1;MQRankSum=-2.410;QD=0.94;ReadPosRankSum=-1.011;VQSLOD=0.1020;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:3,1:4:11.37:11,0,54	./.	0/0:5,0:2:3.92:0,4,14	0/1:7,1:6:0.29:0,0,58	0/0:1,0:1:0.47:0,0,1	./.	0/1:8,0:8:1.77:2,0,258	1/1:4,1:4:3.45:23,3,0	0/0:3,0:3:9.03:0,9,143	0/1:2,1:3:20.15:20,0,102	0/0:2,0:2:5.85:0,6,69	0/1:5,0:5:20.90:21,0,76	0/0:2,0:2:0.89:0,1,2	./.	1/1:2,0:2:1.61:5,2,0	0/1:3,0:3:8.57:9,0,102	0/1:3,1:4:26.96:31,0,27	./.	0/0:1,1:1:0.89:0,1,2	0/0:4,0:4:6.02:0,6,99	0/1:9,3:12:40.29:40,0,100	0/0:5,2:7:2.60:0,3,109	0/0:1,0:1:3.01:0,3,56	./.	0/0:2,0:2:3.01:0,3,56	./.	0/0:4,0:4:12.04:0,12,197	./.
chr10	107298682	.	G	GA	225.43	PASS	AB=0.785;AC=11;AF=0.239;AN=46;BaseQRankSum=4.151;DP=141;FS=41.549;HRun=0;HaplotypeScore=48.3360;InbreedingCoeff=0.0857;MQ=81.87;MQ0=2;MQRankSum=-3.989;QD=5.01;ReadPosRankSum=-0.055;VQSLOD=1.2518;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,1:4:2.44:0,2,105	./.	0/0:15,0:9:11.66:0,12,132	0/0:24,0:17:17.92:0,18,198	1/1:1,0:1:0.47:1,0,0	./.	0/0:8,0:8:14.65:0,15,208	1/1:2,5:5:9.03:138,9,0	0/0:3,0:3:9.03:0,9,121	0/1:2,1:3:33:33,0,75	0/0:2,1:3:6.02:0,6,83	0/1:5,1:6:22.30:22,0,147	0/0:4,0:4:10.58:0,11,123	./.	0/0:4,0:4:8.52:0,9,102	0/1:3,2:5:50.34:50,0,108	0/1:5,2:7:57.11:57,0,108	./.	1/1:1,1:1:2.94:18,3,0	0/0:7,0:7:20.97:0,21,232	0/1:11,3:13:32.92:33,0,116	0/0:6,2:8:15.79:0,16,234	0/0:2,0:2:2.41:0,2,41	0/0:3,0:3:2.99:0,3,23	0/0:3,0:3:5.74:0,6,64	0/0:1,0:1:3.01:0,3,42	0/0:5,0:5:15.05:0,15,209	./.
chr10	107298692	.	AAG	A	572.58	PASS	AB=0.824;AC=13;AF=0.271;AN=48;BaseQRankSum=5.622;DP=165;FS=68.399;HRun=0;HaplotypeScore=50.7739;InbreedingCoeff=-0.4151;MQ=89.42;MQ0=3;MQRankSum=-5.081;QD=5.45;ReadPosRankSum=0.840;VQSLOD=-0.0549;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:5,1:6:34.42:34,0,92	./.	0/0:24,0:16:9.28:0,9,398	0/1:30,1:19:15.96:16,0,259	0/0:1,0:1:0:0,0,0	./.	0/1:5,2:7:58.07:58,0,169	0/1:9,1:8:53.10:53,0,85	0/0:2,0:2:6.02:0,6,103	0/1:2,1:3:29.99:30,0,94	0/1:3,1:4:33.34:33,0,45	0/0:5,0:5:9.03:0,9,154	0/1:3,1:4:47.19:47,0,91	0/0:1,0:1:3.01:0,3,50	0/1:3,1:4:29.92:30,0,53	0/1:4,1:5:72.09:86,0,72	0/1:8,0:8:44.44:44,0,136	./.	0/0:3,0:2:0.47:0,0,1	0/1:5,3:8:92.14:92,0,233	0/0:12,0:11:15.93:0,16,256	0/1:3,5:8:30.79:161,0,31	0/0:3,0:3:6.02:0,6,103	0/0:2,1:3:2.98:0,3,51	0/0:3,1:4:9.03:0,9,154	0/0:1,0:1:3.01:0,3,51	0/1:6,1:7:18.30:18,0,287	./.
chr10	107301406	.	TAATAATAATAATAATAATAAC	T	99.26	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=1.697;DP=224;FS=0.000;HRun=0;HaplotypeScore=116.0166;InbreedingCoeff=0.3930;MQ=54.99;MQ0=3;MQRankSum=-1.467;QD=16.54;ReadPosRankSum=1.220;VQSLOD=2.1554;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:24.08:0,24,1170	0/0:4,0:4:12.04:0,12,459	./.	0/0:4,0:1:2.96:0,3,19	0/0:7,0:7:21.07:0,21,1486	0/0:14,0:14:42.14:0,42,2692	0/0:5,0:5:15.05:0,15,712	0/0:38,0:37:99:0,102,3533	0/0:6,0:6:18.06:0,18,1454	0/0:8,0:8:24.07:0,24,1299	0/0:9,0:9:27.09:0,27,1544	1/1:0,6:6:3.01:176,3,0	0/0:3,0:3:9.02:0,9,387	0/0:6,0:6:18.06:0,18,1208	0/0:8,0:8:24.05:0,24,1437	0/0:2,0:2:6.02:0,6,543	0/0:24,0:24:63.22:0,63,4463	0/0:14,0:14:33.09:0,33,2144	0/0:6,0:6:15.05:0,15,978	0/0:6,0:6:18.06:0,18,1326	0/0:3,0:3:9.02:0,9,631	0/0:1,0:1:2.99:0,3,24	0/0:4,0:4:9.01:0,9,472	./.	0/0:11,0:11:30.08:0,30,1969	0/0:5,0:5:12.04:0,12,1132	0/0:6,0:6:18.06:0,18,1087	0/0:12,0:10:29.96:0,30,1218
chr10	107303001	.	C	CA	382.55	PASS	AB=0.500;AC=15;AF=0.682;AN=22;BaseQRankSum=-2.293;DP=32;FS=0.000;HRun=1;HaplotypeScore=11.1249;InbreedingCoeff=0.3782;MQ=69.43;MQ0=0;MQRankSum=-2.293;QD=22.50;ReadPosRankSum=-1.104;VQSLOD=3.0052;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:2,0:2:6.02:0,6,81	./.	./.	./.	./.	1/1:0,3:3:9.03:123,9,0	./.	1/1:0,1:1:3.01:42,3,0	./.	0/1:0,3:3:0:0,0,0	./.	0/0:0,1:1:0:0,0,0	./.	0/0:0,1:1:0:0,0,0	./.	1/1:0,2:2:6.02:87,6,0	1/1:0,1:1:2.99:23,3,0	./.	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:31,3,0	1/1:0,3:2:5.97:56,6,0	1/1:0,3:3:9.03:105,9,0
chr10	107303005	.	A	AC	408.55	PASS	AB=0.500;AC=16;AF=0.800;AN=20;BaseQRankSum=-2.293;DP=32;FS=0.000;HRun=1;HaplotypeScore=10.9857;InbreedingCoeff=0.3616;MQ=69.43;MQ0=0;MQRankSum=-2.293;QD=21.50;ReadPosRankSum=0.594;VQSLOD=3.3742;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/1:0,2:2:0:0,0,0	0/0:2,0:2:5.96:0,6,44	./.	./.	./.	./.	1/1:0,3:3:9.03:125,9,0	./.	1/1:0,1:1:3.01:42,3,0	./.	0/1:0,3:3:0:0,0,0	./.	./.	./.	./.	./.	1/1:0,2:2:6.02:87,6,0	1/1:0,1:1:3.01:32,3,0	./.	./.	./.	./.	./.	./.	1/1:0,1:1:3:27,3,0	1/1:0,3:2:6.01:66,6,0	1/1:0,3:3:9.03:111,9,0
chr10	107303636	.	A	AGG	120.39	PASS	AC=6;AF=0.150;AN=40;BaseQRankSum=2.826;DP=115;FS=3.833;HRun=9;HaplotypeScore=18.3338;InbreedingCoeff=0.5833;MQ=33.76;MQ0=7;MQRankSum=-1.478;QD=12.04;ReadPosRankSum=0.887;VQSLOD=-0.5261;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:12.03:0,12,123	./.	./.	./.	./.	0/0:9,0:8:21.01:0,21,204	0/0:7,0:6:8.94:0,9,93	1/1:1,0:3:6.01:58,6,0	0/0:3,0:3:9.02:0,9,94	0/0:2,0:2:6.01:0,6,63	0/0:6,0:6:6.01:0,6,61	0/0:3,0:3:0.47:0,0,1	./.	0/0:8,0:8:20.99:0,21,218	0/0:6,0:6:18.04:0,18,187	0/0:4,0:4:12.03:0,12,125	0/0:11,0:11:26.99:0,27,273	0/0:9,0:9:24.05:0,24,251	./.	1/1:0,2:2:6.02:88,6,0	./.	./.	0/0:4,0:4:12.03:0,12,124	0/0:4,0:4:4.31:0,4,61	0/0:8,0:7:8.80:0,9,93	0/0:3,0:3:6.01:0,6,62	1/1:0,3:4:6.02:83,6,0	0/0:2,0:2:3.01:0,3,32
chr10	107303784	.	G	GAGAAAGA	667.38	PASS	AB=0.725;AC=11;AF=0.204;AN=54;BaseQRankSum=8.423;DP=366;FS=7.961;HRun=0;HaplotypeScore=93.9820;InbreedingCoeff=0.5509;MQ=66.31;MQ0=3;MQRankSum=-0.760;QD=8.67;ReadPosRankSum=-0.319;VQSLOD=1.2408;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.04:0,57,1208	1/1:0,1:2:3.01:80,3,0	0/0:24,0:14:24.12:0,24,313	0/0:26,0:11:10.74:0,11,275	0/0:6,0:6:11.94:0,12,160	0/0:16,0:16:45.15:0,45,1106	0/0:9,0:9:23.67:0,24,500	0/1:8,0:25:99:178,0,221	0/0:12,0:12:36.02:0,36,765	0/0:10,0:10:30.10:0,30,691	0/0:13,0:13:35.97:0,36,651	0/0:14,0:13:32.96:0,33,556	0/0:6,0:6:18.05:0,18,363	0/0:11,0:11:27.08:0,27,650	0/0:15,0:15:42.13:0,42,1009	0/0:16,0:15:45.15:0,45,1129	0/0:37,0:37:99:0,108,2498	0/0:15,0:16:29.05:0,29,954	0/1:5,0:18:89.82:205,0,90	1/1:0,0:3:2.98:21,3,0	1/1:1,0:6:11.90:83,12,0	./.	0/0:3,0:3:5.99:0,6,102	0/0:7,0:7:21.07:0,21,483	0/0:10,0:10:30.09:0,30,715	0/0:15,0:15:45.15:0,45,1080	1/1:1,0:13:35.68:247,36,0	0/1:9,0:10:2.33:2,0,505
chr10	107304013	.	CTTCT	C	2860.20	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=8.771;DP=435;FS=18.766;HRun=0;HaplotypeScore=76.9435;InbreedingCoeff=0.6680;MQ=67.15;MQ0=2;MQRankSum=-3.134;QD=26.24;ReadPosRankSum=-1.920;VQSLOD=1.3507;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,2369	0/1:5,0:5:17.97:18,0,93	0/0:16,0:11:22.06:0,22,311	0/0:21,0:15:25.42:0,25,451	0/0:12,0:12:29.46:0,29,655	0/0:11,0:11:29.99:0,30,611	0/0:19,0:19:57.16:0,57,1238	1/1:4,22:26:62.23:882,62,0	0/0:12,0:12:36.12:0,36,856	0/0:18,0:18:45.14:0,45,991	0/0:14,0:14:32.96:0,33,711	0/1:13,0:13:14.67:15,0,317	0/0:11,0:11:30.10:0,30,615	0/1:8,0:8:7.99:8,0,372	0/0:18,0:18:51.16:0,51,1178	0/0:14,0:14:39.10:0,39,836	0/0:28,0:28:73.07:0,73,1581	0/0:22,0:22:51.15:0,51,1151	1/1:0,16:16:48.10:730,48,0	1/1:0,2:2:6.02:115,6,0	1/1:1,15:16:24.04:405,24,0	0/0:2,0:2:6.02:0,6,154	0/0:8,0:8:11.88:0,12,493	0/0:12,0:12:33.10:0,33,681	0/0:11,0:11:33.11:0,33,779	0/0:23,0:23:66.21:0,66,1406	1/1:11,12:22:56.63:866,57,0	0/0:15,0:15:45.14:0,45,1113
chr10	107304016	.	CT	C	1115.12	PASS	AB=0.889;AC=15;AF=0.268;AN=56;BaseQRankSum=10.781;DP=428;FS=17.697;HRun=10;HaplotypeScore=60.1562;InbreedingCoeff=0.8683;MQ=66.29;MQ0=3;MQRankSum=-3.671;QD=10.83;ReadPosRankSum=-1.040;VQSLOD=0.8334;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:96.22:0,96,1047	1/1:0,5:5:15:130,15,0	0/0:18,2:12:7.72:0,8,159	0/0:23,0:14:23.16:0,23,215	0/0:11,0:11:27.05:0,27,287	0/0:9,0:9:21.06:0,21,232	0/0:22,0:22:56.79:0,57,588	1/1:24,0:24:49.39:292,49,0	0/0:14,0:14:36.09:0,36,391	0/0:17,0:17:39.11:0,39,431	0/0:11,0:11:24.06:0,24,265	1/1:0,12:12:35.99:311,36,0	0/0:11,0:11:15.03:0,15,159	0/1:7,1:8:5:5,0,171	0/0:18,0:18:48.02:0,48,514	0/0:12,0:12:33.08:0,33,357	0/0:29,0:29:64.02:0,64,679	0/0:20,0:20:45.12:0,45,497	1/1:16,0:16:37.08:208,37,0	1/1:2,0:2:5.54:25,6,0	1/1:15,0:15:17.21:77,17,0	0/0:2,0:2:6.02:0,6,66	0/0:8,0:8:18.52:0,19,200	0/0:11,0:11:24.02:0,24,252	0/0:12,0:12:33.09:0,33,364	0/0:22,0:22:62.94:0,63,654	1/1:15,6:20:48.08:259,48,0	0/0:16,0:16:42.08:0,42,452
chr10	107304073	.	A	ATT	1393.66	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.489;DP=455;FS=13.636;HRun=10;HaplotypeScore=66.8416;InbreedingCoeff=0.8240;MQ=78.40;MQ0=2;MQRankSum=-5.857;QD=16.21;ReadPosRankSum=-0.776;VQSLOD=0.4982;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:87.14:0,87,885	1/1:0,0:6:14.97:53,15,0	0/0:42,0:23:4.50:0,5,157	0/0:42,0:21:9.99:0,10,100	0/0:6,0:6:8.99:0,9,92	0/0:9,0:9:27.06:0,27,275	0/0:20,0:20:54.09:0,54,543	1/1:12,14:22:36.12:537,36,0	0/0:15,0:15:36.07:0,36,366	0/0:22,0:21:51.09:0,51,519	0/0:10,0:10:27.06:0,27,274	1/1:11,0:11:2.11:37,2,0	0/0:7,0:7:15:0,15,152	0/0:9,0:9:24.01:0,24,236	0/0:17,0:17:42.09:0,42,427	0/0:10,0:10:27.04:0,27,275	0/0:33,0:33:78.09:0,78,793	0/0:27,0:27:48.31:0,48,540	1/1:5,6:11:17.54:223,18,0	1/1:1,1:2:3.01:45,3,0	1/1:1,3:3:6.02:89,6,0	0/0:1,0:1:3.01:0,3,31	0/0:5,0:5:15.03:0,15,153	0/0:7,0:7:21.05:0,21,214	0/0:16,0:16:48.11:0,48,488	0/0:22,0:21:54.07:0,54,542	1/1:10,12:23:42.12:587,42,0	0/0:13,0:12:36.08:0,36,366
chr10	107304177	.	TTTTTTTTTTTTTTTTTTTTTG	T	79.28	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=2.271;DP=468;FS=0.000;HRun=0;HaplotypeScore=151.4683;InbreedingCoeff=0.6114;MQ=42.51;MQ0=97;MQRankSum=-1.595;QD=7.93;ReadPosRankSum=1.694;VQSLOD=2.4310;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:64.10:0,64,4034	1/1:1,0:1:2.68:11,3,0	0/0:52,0:6:12.92:0,13,344	0/0:67,0:6:12.40:0,12,255	0/0:24,0:18:42.05:0,42,2396	0/0:13,0:11:30.10:0,30,2230	0/0:7,0:6:15.05:0,15,922	0/0:28,0:21:51.92:0,52,2940	0/0:11,0:8:24.08:0,24,1837	0/0:17,0:14:41.78:0,42,1957	0/0:9,0:9:27.05:0,27,1769	1/1:1,8:8:2.99:155,3,0	0/0:7,0:6:9.02:0,9,523	0/0:10,0:9:24.07:0,24,1655	0/0:8,0:7:18.05:0,18,1045	0/0:8,0:8:18.90:0,19,997	0/0:30,0:28:78.23:0,78,5499	0/0:19,0:16:39.13:0,39,2879	0/0:17,0:11:27.09:0,27,1538	0/0:13,0:10:15.05:0,15,945	./.	0/0:3,0:2:6.02:0,6,266	0/0:8,0:8:18.06:0,18,952	0/0:6,0:4:5.66:0,6,320	0/0:14,0:14:39.13:0,39,1968	0/0:21,0:19:51.17:0,51,2997	0/0:11,0:9:15.05:0,15,776	0/0:22,0:18:39.13:0,39,2821
chr10	107304198	.	G	GTT	974.46	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=3.870;DP=461;FS=27.357;HRun=24;HaplotypeScore=60.5007;InbreedingCoeff=0.6448;MQ=59.38;MQ0=32;MQRankSum=-1.826;QD=12.99;ReadPosRankSum=-2.765;VQSLOD=0.2494;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:16.77:0,17,414	0/0:3,0:3:2.49:0,2,10	0/0:39,0:10:10.20:0,10,99	0/0:55,0:17:8.52:0,9,144	0/0:26,0:21:45.10:0,45,483	0/0:11,0:9:19.72:0,20,249	0/0:5,0:5:6.01:0,6,72	1/1:10,15:22:36.55:419,37,0	0/0:15,0:13:23.22:0,23,226	0/0:15,0:12:14.45:0,14,188	0/0:11,0:11:30.08:0,30,359	0/0:8,0:8:2.55:0,3,13	0/0:6,0:5:6.49:0,6,77	0/0:15,0:15:29.44:0,29,285	0/0:14,0:13:6:0,6,210	0/0:7,0:7:6.55:0,7,117	0/0:31,0:30:44.27:0,44,626	0/0:16,0:14:18.14:0,18,179	1/1:21,0:14:0.32:316,0,0	1/1:5,10:13:21.46:242,21,0	./.	0/0:7,0:6:12.03:0,12,151	0/0:8,0:8:15.52:0,16,136	0/0:4,0:4:6.02:0,6,76	0/0:11,0:11:13.57:0,14,185	0/0:19,0:18:31.39:0,31,383	1/1:2,9:13:9.03:137,9,0	0/0:23,0:19:6.37:0,6,304
chr10	107304517	.	GCCTCTGCCTCTT	G	2548.69	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=3.583;DP=670;FS=0.000;HRun=0;HaplotypeScore=204.5197;InbreedingCoeff=0.8552;MQ=67.85;MQ0=7;MQRankSum=-2.549;QD=18.08;ReadPosRankSum=-3.019;VQSLOD=2.1061;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:99:0,105,4587	1/1:2,0:2:5.91:38,6,0	0/0:35,0:24:69.18:0,69,2134	0/0:37,0:32:81.34:0,81,2362	0/0:23,0:19:50.94:0,51,2011	0/0:12,0:12:36.08:0,36,1370	0/0:33,0:33:99:0,99,4847	0/1:27,0:27:99:470,0,103	0/0:26,0:26:72.20:0,72,3412	0/0:13,0:12:36.11:0,36,1577	0/0:10,0:10:30.03:0,30,965	0/0:24,0:24:18.70:0,19,2935	0/0:24,0:24:69.17:0,69,3184	0/0:21,0:21:63.19:0,63,3255	0/0:32,0:32:96.25:0,96,4601	0/0:35,0:35:99:0,105,5418	0/0:26,0:26:72.20:0,72,3490	0/0:24,0:24:72.18:0,72,3043	1/1:6,11:14:29.98:530,30,0	1/1:0,11:11:17.80:303,18,0	1/1:7,56:62:21.48:689,21,0	0/0:15,0:15:42.04:0,42,1002	0/0:13,0:12:36.01:0,36,1144	0/0:37,0:37:99:0,111,5638	0/0:15,0:14:38.98:0,39,1216	0/0:22,0:21:61.98:0,62,2491	1/1:6,15:21:17.90:691,18,0	0/0:13,0:13:39.11:0,39,1837
chr10	107307487	.	T	TGA	559.90	PASS	AB=0.985;AC=25;AF=0.446;AN=56;BaseQRankSum=0.508;DP=625;FS=8.787;HRun=0;HaplotypeScore=283.7981;InbreedingCoeff=-0.1441;MQ=32.19;MQ0=0;MQRankSum=-1.406;QD=1.21;ReadPosRankSum=0.162;VQSLOD=0.7637;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:7:48,7,0	0/0:7,0:7:7.62:0,8,34	0/0:3,0:1:3.01:0,3,40	0/0:4,0:2:2.98:0,3,23	1/1:30,0:30:2.04:35,2,0	0/0:15,0:15:4.42:0,4,43	0/1:36,0:36:17.45:17,0,52	0/1:26,3:29:99:129,0,135	0/1:23,0:23:0.41:0,0,38	0/1:33,0:33:82.21:82,0,155	1/1:12,0:12:1.41:8,1,0	0/0:44,0:44:2.53:0,3,35	0/0:28,0:28:23.82:0,24,113	0/1:30,0:30:20.73:23,0,21	0/1:35,0:34:12.25:12,0,38	1/1:34,0:34:2.27:27,2,0	0/1:12,0:12:8.14:34,0,8	0/1:14,0:14:22.12:22,0,117	0/1:8,1:9:9.59:41,0,10	1/1:20,0:20:0.58:36,1,0	0/1:18,0:18:23.38:23,0,30	0/0:34,0:34:6.16:0,6,70	1/1:21,0:21:1.45:30,1,0	0/1:20,0:20:8.64:46,0,9	0/1:31,0:31:3:3,0,43	0/1:30,0:29:88.95:93,0,89	0/0:19,0:19:11.69:0,12,77	0/0:8,0:8:14.43:0,14,67
chr10	107307497	.	A	AGT	1082.14	PASS	AB=0.873;AC=14;AF=0.250;AN=56;BaseQRankSum=9.151;DP=807;FS=60.351;HRun=0;HaplotypeScore=315.2480;InbreedingCoeff=-0.3326;MQ=34.17;MQ0=3;MQRankSum=-8.649;QD=2.67;ReadPosRankSum=0.409;VQSLOD=0.7371;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,5:31:16.43:0,16,273	0/0:11,1:12:8.87:0,9,157	0/0:16,0:3:5.88:0,6,59	0/0:14,0:5:14.96:0,15,156	0/0:31,3:35:13.75:0,14,211	0/0:14,7:21:10.12:0,10,134	0/0:41,6:47:4.52:0,5,307	0/1:43,6:48:99:386,0,626	0/0:21,5:26:9.66:0,10,128	0/1:37,1:38:33.23:33,0,818	0/1:11,3:14:1.58:2,0,42	0/0:42,6:48:11.17:0,11,191	0/1:26,8:34:99:114,0,182	0/1:29,8:37:22.79:23,0,129	0/1:33,8:40:10.18:10,0,206	0/1:31,10:41:45.20:45,0,217	0/1:14,1:15:14.12:14,0,306	0/0:20,0:20:27.39:0,27,472	0/1:21,1:20:99:142,0,284	0/1:17,7:24:46.85:98,0,47	0/0:28,0:28:32.98:0,33,443	0/0:34,3:37:11.63:0,12,130	0/1:23,2:25:0.19:0,0,168	0/0:29,0:29:21.05:0,21,284	0/0:37,1:38:31.87:0,32,437	0/1:29,3:31:99:125,0,499	0/1:17,8:25:99:197,0,148	0/1:8,0:8:37.64:38,0,69
chr10	107308001	.	TAC	T	257.79	PASS	AB=0.946;AC=17;AF=0.340;AN=50;BaseQRankSum=2.863;DP=469;FS=5.104;HRun=0;HaplotypeScore=70.2743;InbreedingCoeff=-0.3147;MQ=67.49;MQ0=8;MQRankSum=1.270;QD=0.86;ReadPosRankSum=1.793;VQSLOD=1.0942;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,1:28:4.60:5,0,264	0/1:10,0:10:8.60:9,0,115	./.	./.	0/0:8,0:6:5.51:0,6,54	0/1:21,0:21:39.65:40,0,213	0/1:19,3:22:47.17:47,0,117	0/0:23,0:23:10.84:0,11,56	0/1:13,1:14:20.48:20,0,119	0/0:11,0:11:5.81:0,6,89	0/1:14,0:14:19.81:20,0,23	0/1:9,0:16:27.38:27,0,43	0/0:6,0:6:3.48:0,3,44	0/0:14,0:14:15.04:0,15,203	0/1:14,3:17:43.95:44,0,201	0/0:15,0:15:12.01:0,12,137	0/0:12,0:12:11.50:0,11,120	0/1:21,1:22:11.73:12,0,317	1/1:17,0:17:6.15:23,6,0	0/1:7,0:7:1.49:1,0,21	0/1:35,0:35:8.92:48,0,9	0/1:11,0:11:2.72:5,0,3	0/1:14,1:15:23.81:24,0,45	0/1:30,1:30:66.79:67,0,476	0/0:7,0:7:9.03:0,9,134	0/1:21,0:21:6.22:6,0,50	./.	0/0:17,0:15:4.36:0,4,21
chr10	107308045	.	CAG	C	1640.69	PASS	AB=0.993;AC=17;AF=0.304;AN=56;BaseQRankSum=6.823;DP=633;FS=60.731;HRun=0;HaplotypeScore=85.0629;InbreedingCoeff=0.4339;MQ=55.32;MQ0=32;MQRankSum=-2.840;QD=6.26;ReadPosRankSum=-3.472;VQSLOD=0.0819;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:36:12.71:13,0,489	0/1:12,0:12:2.27:181,0,2	0/0:13,0:4:8.95:0,9,72	0/0:17,0:8:16.24:0,16,123	0/0:23,0:19:36.85:0,37,397	0/1:22,0:21:6.05:6,0,409	0/0:32,0:30:31.03:0,31,476	1/1:26,0:23:60.73:408,61,0	0/0:17,0:17:28.24:0,28,391	0/1:24,0:21:4.45:4,0,378	0/1:18,1:15:7.35:7,0,167	0/0:34,0:32:58.11:0,58,487	0/0:14,0:14:27.03:0,27,225	0/0:22,0:22:53.92:0,54,532	0/0:27,0:27:46.01:0,46,687	0/0:22,0:21:56.91:0,57,553	0/0:26,0:26:50.10:0,50,544	0/0:30,0:29:54.62:0,55,681	1/1:3,15:17:44.44:313,44,0	1/1:18,0:14:26.83:211,27,0	1/1:37,0:35:50.67:398,51,0	0/0:20,0:19:11.15:0,11,312	0/0:14,0:13:2.84:0,3,139	0/0:39,0:38:4.50:0,4,810	0/0:21,0:20:44.97:0,45,465	0/1:26,0:23:92.82:93,0,310	1/1:7,0:7:14.91:112,15,0	0/1:14,0:11:52.74:76,0,53
chr10	107308303	.	CTG	C	519.17	PASS	AB=0.928;AC=20;AF=0.370;AN=54;BaseQRankSum=7.000;DP=565;FS=0.656;HRun=0;HaplotypeScore=83.9209;InbreedingCoeff=-0.0814;MQ=69.51;MQ0=7;MQRankSum=-1.225;QD=1.60;ReadPosRankSum=0.435;VQSLOD=1.4086;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:29:8.85:9,0,285	0/1:6,0:6:17.91:18,0,111	0/0:31,0:24:0.89:0,1,2	./.	0/0:15,0:14:18.06:0,18,244	0/1:16,7:25:99:164,0,154	0/1:28,1:29:1.72:2,0,201	0/0:23,0:22:3:0,3,29	0/0:19,1:20:6.16:0,6,475	0/1:24,0:24:21.83:22,0,294	0/1:15,0:15:14.65:15,0,169	0/0:15,0:22:1.79:0,2,95	0/0:17,0:19:20.50:0,20,405	0/1:16,3:20:35.92:36,0,268	0/1:14,5:19:86.66:87,0,449	0/1:12,0:12:11.97:12,0,183	0/1:26,3:29:20.77:21,0,515	0/0:15,0:15:21.01:0,21,249	1/1:17,1:24:23.18:150,23,0	1/1:8,0:10:2.68:11,3,0	1/1:25,0:28:2.99:23,3,0	0/1:16,1:17:36.33:36,0,288	0/0:17,0:15:15.05:0,15,200	0/0:22,0:23:32.94:0,33,475	0/0:15,0:14:13.32:0,13,231	0/1:25,1:27:12.75:13,0,339	1/1:3,0:10:8.83:58,9,0	0/0:13,0:12:3.01:0,3,45
chr10	107308627	.	A	ACC	625.78	PASS	AB=0.818;AC=9;AF=0.161;AN=56;BaseQRankSum=3.171;DP=471;FS=0.000;HRun=9;HaplotypeScore=77.8076;InbreedingCoeff=0.7788;MQ=70.47;MQ0=0;MQRankSum=-0.810;QD=8.69;ReadPosRankSum=-3.270;VQSLOD=-0.2009;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:58.66:0,59,677	0/0:3,0:3:6.01:0,6,64	0/0:24,0:11:16.96:0,17,133	0/0:23,0:18:20.03:0,20,211	0/0:22,0:23:12.33:0,12,244	0/0:23,0:23:38.93:0,39,469	0/0:16,0:16:36.55:0,37,382	1/1:15,7:25:15.51:194,16,0	0/0:16,0:16:33.03:0,33,333	0/0:14,0:14:24.03:0,24,293	0/1:7,1:9:18.81:19,0,67	0/0:22,0:22:34.91:0,35,340	0/0:12,0:12:31.89:0,32,324	0/0:11,0:11:27.06:0,27,287	0/0:19,0:19:39.06:0,39,405	0/0:22,0:24:44.92:0,45,589	0/0:28,0:28:65.13:0,65,676	0/0:13,0:13:20.70:0,21,267	1/1:10,3:13:27.51:322,28,0	1/1:6,0:10:10.78:92,11,0	0/0:7,0:15:0.46:0,0,1	0/0:12,0:12:18:0,18,184	0/0:8,0:8:18.03:0,18,189	0/0:22,0:22:44.09:0,44,539	0/0:17,0:17:23.91:0,24,251	0/0:10,0:10:27.07:0,27,286	1/1:3,11:15:12.03:154,12,0	0/0:9,1:10:18.43:0,18,167
chr10	107309262	.	ACGGGG	A	650.87	PASS	AC=6;AF=0.167;AN=36;BaseQRankSum=4.607;DP=149;FS=4.672;HRun=0;HaplotypeScore=38.1331;InbreedingCoeff=0.5164;MQ=73.62;MQ0=0;MQRankSum=-1.921;QD=12.28;ReadPosRankSum=0.123;VQSLOD=1.7479;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:21.06:0,21,555	1/1:2,1:3:3.01:59,3,0	0/0:4,0:3:3:0,3,29	0/0:3,0:3:3.01:0,3,66	0/0:2,0:2:0:0,0,0	./.	0/0:13,0:13:18.04:0,18,332	./.	0/0:2,0:2:3.01:0,3,51	0/0:7,0:7:9.03:0,9,253	0/0:1,0:1:3.01:0,3,88	./.	./.	./.	0/0:3,0:3:9.03:0,9,227	0/0:1,0:1:3.01:0,3,88	0/0:13,0:13:24.08:0,24,665	0/0:5,0:5:12.04:0,12,329	1/1:1,5:6:15.04:238,15,0	./.	1/1:21,23:44:24:467,24,0	./.	./.	0/0:6,0:6:9.03:0,9,265	0/0:4,0:4:3.01:0,3,88	0/0:7,0:7:6.02:0,6,175	./.	./.
chr10	107317425	.	C	CT	1548.49	PASS	AB=0.889;AC=11;AF=0.196;AN=56;BaseQRankSum=-8.444;DP=439;FS=3.237;HRun=10;HaplotypeScore=50.3374;InbreedingCoeff=0.8018;MQ=74.55;MQ0=0;MQRankSum=-2.095;QD=16.65;ReadPosRankSum=-2.824;VQSLOD=3.0922;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:78.93:0,79,621	0/0:6,0:6:14.97:0,15,120	0/0:21,0:18:30.08:0,30,231	0/0:9,0:10:8.93:0,9,73	0/0:26,0:29:66.89:0,67,519	0/0:20,0:21:55.95:0,56,447	0/0:6,0:6:14.98:0,15,123	1/1:4,22:25:59.47:591,59,0	0/0:13,0:13:35.94:0,36,295	0/0:24,0:24:62.90:0,63,515	0/0:19,0:19:44.89:0,45,363	0/0:4,0:4:5.99:0,6,49	0/0:10,0:10:26.95:0,27,221	0/0:5,0:5:8.97:0,9,74	0/1:7,1:8:11.01:11,0,127	0/0:15,0:15:35.94:0,36,293	0/0:20,0:20:53.93:0,54,443	0/0:37,0:37:83.81:0,84,681	1/1:7,9:16:10.59:291,11,0	1/1:4,16:20:20.42:410,20,0	1/1:0,3:3:9.02:96,9,0	0/0:3,0:3:8.99:0,9,74	0/0:16,0:16:11.86:0,12,240	0/0:9,0:9:23.93:0,24,191	0/0:18,0:18:47.93:0,48,392	0/0:15,0:16:37.96:0,38,298	1/1:5,15:20:30.07:320,30,0	0/0:12,0:12:29.95:0,30,246
chr10	107321246	.	C	CA	3658.08	PASS	AB=0.601;AC=9;AF=0.161;AN=56;BaseQRankSum=12.414;DP=876;FS=1.265;HRun=2;HaplotypeScore=100.3547;InbreedingCoeff=0.5380;MQ=62.61;MQ0=10;MQRankSum=-10.739;QD=23.45;ReadPosRankSum=-3.475;VQSLOD=2.5071;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,117,1414	0/1:3,12:14:69.23:425,0,69	0/0:37,0:22:19.84:0,20,619	0/0:57,0:25:50.62:0,51,647	0/0:31,0:31:87.24:0,87,1045	0/0:20,0:20:57.17:0,57,694	0/0:24,0:24:69.22:0,69,855	0/1:5,19:20:79.28:627,0,79	0/0:20,0:20:54.17:0,54,669	0/0:39,0:39:99:0,111,1347	0/0:24,0:25:75.15:0,75,880	0/0:28,0:28:81.24:0,81,992	0/0:30,0:30:90.27:0,90,1103	0/0:31,0:31:87.27:0,87,1075	0/0:29,0:29:81.24:0,81,992	0/0:38,0:38:99:0,114,1402	0/0:27,0:27:54.91:0,55,872	0/0:31,0:31:90.21:0,90,1078	0/1:16,13:26:99:494,0,256	1/1:5,26:26:9.08:795,9,0	1/1:2,25:25:8.11:484,8,0	0/0:28,0:28:81.24:0,81,992	0/0:33,0:33:99:0,99,1215	0/0:50,0:50:99:0,141,1735	0/0:26,0:26:75.23:0,75,918	0/0:34,1:43:5.10:0,5,1079	1/1:4,26:24:36.04:834,36,0	0/0:27,0:27:81.25:0,81,1004
chr10	107321255	.	CA	C	97.77	PASS	AB=0.714;AC=1;AF=0.018;AN=56;BaseQRankSum=4.292;DP=845;FS=0.000;HRun=3;HaplotypeScore=105.3433;InbreedingCoeff=-0.0182;MQ=61.61;MQ0=14;MQRankSum=-2.367;QD=6.52;ReadPosRankSum=-0.928;VQSLOD=0.0056;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,123,1731	0/1:9,6:14:99:172,0,277	0/0:33,0:18:44.08:0,44,552	0/0:48,0:17:35.58:0,36,508	0/0:31,0:30:87.29:0,87,1230	0/0:21,0:21:63.19:0,63,871	0/0:26,0:26:75.25:0,75,1078	0/0:20,0:13:35.97:0,36,386	0/0:17,0:17:51.16:0,51,716	0/0:38,0:38:99:0,114,1603	0/0:28,0:28:79.51:0,80,1124	0/0:26,0:26:78.25:0,78,1103	0/0:31,0:31:90.25:0,90,1251	0/0:32,0:31:93.26:0,93,1298	0/0:33,0:33:96.29:0,96,1342	0/0:34,0:34:96.32:0,96,1380	0/0:26,0:26:76.50:0,76,1078	0/0:33,0:33:90.30:0,90,1293	0/0:29,0:25:63.51:0,64,734	0/0:26,1:22:27.76:0,28,490	0/0:26,0:23:40.23:0,40,394	0/0:28,0:28:81.26:0,81,1145	0/0:32,0:32:90.06:0,90,1276	0/0:42,2:44:55.11:0,55,1694	0/0:24,0:24:72.23:0,72,1007	0/0:39,0:39:99:0,117,1562	0/0:29,0:23:57.30:0,57,614	0/0:30,0:30:90.26:0,90,1239
chr10	107321260	.	CA	C	986.87	PASS	AB=0.817;AC=6;AF=0.107;AN=56;BaseQRankSum=10.609;DP=851;FS=0.000;HRun=3;HaplotypeScore=95.5173;InbreedingCoeff=-0.1206;MQ=58.04;MQ0=16;MQRankSum=-8.498;QD=6.25;ReadPosRankSum=0.373;VQSLOD=0.2164;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,133,1882	0/1:15,0:14:86.98:87,0,259	0/0:28,0:13:29.12:0,29,430	0/0:45,0:14:15.51:0,16,323	0/0:34,0:33:93.27:0,93,1282	0/0:22,0:22:60.20:0,60,861	0/0:26,0:26:75.25:0,75,1078	0/1:26,9:11:99:176,0,142	0/0:16,0:16:48.16:0,48,690	0/0:41,0:41:99:0,123,1743	0/0:28,0:28:78.52:0,79,1070	0/0:28,0:28:84.28:0,84,1206	0/0:29,0:29:87.27:0,87,1215	0/0:32,0:31:90.30:0,90,1291	0/0:34,0:34:96.27:0,96,1323	0/0:33,0:33:99:0,99,1424	0/0:25,0:25:70.45:0,70,975	0/0:31,0:31:93.29:0,93,1311	0/1:21,3:20:62.78:63,0,508	0/1:15,13:23:99:381,0,260	0/1:17,9:23:99:169,0,331	0/0:26,0:26:78.25:0,78,1098	0/0:31,0:31:78.03:0,78,1121	0/0:42,0:42:99:0,123,1691	0/0:23,0:23:66.19:0,66,927	0/0:40,0:40:99:0,114,1531	0/1:22,8:24:99:236,0,395	0/0:33,0:33:99:0,99,1424
chr10	107321290	.	CA	C	142.37	PASS	AB=0.680;AC=1;AF=0.018;AN=56;BaseQRankSum=4.914;DP=879;FS=7.323;HRun=3;HaplotypeScore=85.8946;InbreedingCoeff=-0.0209;MQ=52.71;MQ0=43;MQRankSum=-4.814;QD=8.37;ReadPosRankSum=-0.644;VQSLOD=0.2473;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,150,2059	0/1:9,8:15:99:217,0,180	0/0:22,0:6:18.06:0,18,235	0/0:26,1:4:12.04:0,12,161	0/0:33,0:32:90.30:0,90,1293	0/0:20,0:20:57.19:0,57,820	0/0:28,0:27:81.26:0,81,1146	0/0:57,0:23:66.19:0,66,893	0/0:19,0:19:54.18:0,54,776	0/0:35,0:35:99:0,105,1485	0/0:28,0:28:70.47:0,70,977	0/0:34,0:34:93.31:0,93,1337	0/0:29,0:29:87.29:0,87,1246	0/0:31,0:30:81.27:0,81,1164	0/0:35,0:35:99:0,102,1423	0/0:33,0:33:93.29:0,93,1316	0/0:23,0:23:64.46:0,64,908	0/0:25,0:25:72.24:0,72,1030	0/0:37,0:11:24.05:0,24,321	0/0:26,0:21:57.15:0,57,788	0/0:34,0:31:11.37:0,11,809	0/0:25,0:25:66.21:0,66,931	0/0:28,0:27:75.24:0,75,1060	0/0:42,0:42:99:0,111,1578	0/0:20,0:20:60.16:0,60,840	0/0:34,0:34:99:0,102,1388	0/0:36,0:30:75.20:0,75,1026	0/0:49,0:48:99:0,144,1996
chr10	107321300	.	CA	C	146.73	PASS	AB=0.720;AC=1;AF=0.018;AN=56;BaseQRankSum=4.233;DP=871;FS=7.947;HRun=3;HaplotypeScore=84.7703;InbreedingCoeff=-0.0104;MQ=53.43;MQ0=42;MQRankSum=-4.651;QD=8.15;ReadPosRankSum=0.660;VQSLOD=0.4341;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,150,2093	0/1:11,7:16:24.06:221,0,24	0/0:29,0:13:39.11:0,39,514	0/0:30,0:11:33.06:0,33,419	0/0:31,0:30:84.26:0,84,1186	0/0:21,0:21:60.20:0,60,863	0/0:27,0:26:75.24:0,75,1058	0/0:64,0:29:87.29:0,87,1249	0/0:19,0:19:54.17:0,54,758	0/0:31,0:31:90.30:0,90,1294	0/0:25,0:25:61.45:0,61,861	0/0:31,0:31:93.31:0,93,1337	0/0:27,0:27:81.27:0,81,1164	0/0:26,0:25:69.23:0,69,992	0/0:33,0:33:90.27:0,90,1256	0/0:29,0:29:84.27:0,84,1189	0/0:25,0:25:73.44:0,73,997	0/0:24,0:24:72.22:0,72,1016	0/0:39,0:13:30.09:0,30,416	0/0:28,0:23:51.17:0,51,725	0/0:34,0:33:83.73:0,84,1103	0/0:26,0:26:63.21:0,63,906	0/0:25,0:24:69.22:0,69,971	0/0:34,0:34:99:0,99,1423	0/0:21,0:21:57.19:0,57,819	0/0:36,0:36:99:0,108,1401	0/0:35,0:29:78.25:0,78,1100	0/0:52,0:51:99:0,150,2119
chr10	107321305	.	CA	C	221.70	PASS	AB=0.667;AC=1;AF=0.018;AN=56;BaseQRankSum=5.276;DP=853;FS=4.639;HRun=3;HaplotypeScore=82.7156;InbreedingCoeff=-0.0181;MQ=53.53;MQ0=40;MQRankSum=-4.281;QD=12.32;ReadPosRankSum=-0.577;VQSLOD=1.7794;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,154,2200	0/1:9,9:16:42:296,0,42	0/0:30,0:14:41.90:0,42,537	0/0:31,0:12:35.75:0,36,453	0/0:29,0:28:78.25:0,78,1091	0/0:20,0:20:57.19:0,57,819	0/0:22,0:21:60.20:0,60,862	0/0:67,0:34:99:0,102,1389	0/0:18,0:18:54.18:0,54,777	0/0:29,0:29:87.29:0,87,1243	0/0:26,0:26:64.45:0,64,887	0/0:33,0:33:99:0,99,1407	0/0:26,0:26:75.25:0,75,1078	0/0:23,0:22:63.21:0,63,905	0/0:30,0:30:87.27:0,87,1226	0/0:27,0:27:78.26:0,78,1114	0/0:24,0:24:67.47:0,67,952	0/0:22,0:22:66.22:0,66,949	0/0:38,0:12:33.11:0,33,473	0/0:27,0:22:53.97:0,54,734	0/0:35,0:34:86.72:0,87,1103	0/0:26,0:26:66.21:0,66,931	0/0:24,0:23:66.20:0,66,914	0/0:33,0:33:93.31:0,93,1338	0/0:21,0:21:63.18:0,63,884	0/0:37,0:37:99:0,108,1466	0/0:35,0:29:78.23:0,78,1099	0/0:51,0:50:99:0,151,2157
chr10	107321313	.	AG	A	252.28	PASS	AB=0.630;AC=1;AF=0.018;AN=56;BaseQRankSum=5.352;DP=812;FS=9.708;HRun=1;HaplotypeScore=82.7179;InbreedingCoeff=-0.0256;MQ=56.39;MQ0=22;MQRankSum=-4.330;QD=14.84;ReadPosRankSum=0.137;VQSLOD=2.3494;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,148,2340	0/1:7,10:15:99:327,0,222	0/0:31,0:15:44.27:0,44,617	0/0:32,1:14:1.82:0,2,473	0/0:29,0:28:72.25:0,72,1147	0/0:20,0:20:60.19:0,60,934	0/0:23,0:22:66.23:0,66,1051	0/0:49,0:36:99:0,108,1612	0/0:18,0:18:54.18:0,54,858	0/0:29,0:29:87.28:0,87,1344	0/0:26,0:26:61.96:0,62,961	0/0:31,0:31:93.32:0,93,1479	0/0:25,0:25:75.26:0,75,1188	0/0:22,0:21:63.21:0,63,1004	0/0:31,0:30:93.29:0,93,1426	0/0:26,0:26:77.48:0,77,1201	0/0:24,0:24:70.94:0,71,1018	0/0:22,0:22:66.19:0,66,1014	0/0:27,0:18:50.96:0,51,749	0/0:23,0:18:44.94:0,45,677	0/0:35,0:35:85.96:0,86,1290	0/0:27,0:27:72.23:0,72,1111	0/0:21,0:21:63.20:0,63,979	0/0:32,0:32:93.30:0,93,1459	0/0:20,0:20:60.20:0,60,957	0/0:39,0:39:99:0,117,1720	0/0:34,0:28:75.24:0,75,1130	0/0:47,0:46:99:0,138,2194
chr10	107321661	.	TCTG	T	404.98	PASS	AB=0.949;AC=16;AF=0.320;AN=50;BaseQRankSum=5.951;DP=754;FS=1.722;HRun=0;HaplotypeScore=92.3794;InbreedingCoeff=0.2864;MQ=39.47;MQ0=121;MQRankSum=-3.949;QD=1.48;ReadPosRankSum=-2.810;VQSLOD=1.4392;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:43:50.74:0,51,512	0/1:11,0:7:6:6,0,47	./.	./.	0/0:31,0:23:9.42:0,9,228	0/0:29,0:22:10.52:0,11,227	0/0:31,0:19:43.95:0,44,291	1/1:13,0:2:1.17:3,1,0	0/0:34,0:30:47.62:0,48,516	0/0:36,0:26:45.56:0,46,479	0/0:21,0:17:14.93:0,15,150	0/1:18,14:14:7.09:44,0,7	0/1:30,0:19:27.30:62,0,27	1/1:20,0:9:5.98:50,6,0	0/0:27,0:23:26.93:0,27,307	0/0:37,0:32:58.64:0,59,495	0/0:42,0:33:17.34:0,17,153	1/1:24,0:16:10.19:96,10,0	1/1:19,0:10:2.85:17,3,0	./.	0/0:21,0:10:0.47:0,0,2	0/0:31,0:24:26.34:0,26,269	0/1:19,0:11:20.18:20,0,72	0/0:55,0:30:44.27:0,44,451	0/0:21,0:12:23.08:0,23,242	0/1:33,0:24:99:155,0,245	1/1:20,0:14:2.21:49,2,0	0/1:53,0:31:51.23:51,0,54
chr10	107321691	.	TCTG	T	50.03	PASS	AB=0.944;AC=7;AF=0.140;AN=50;BaseQRankSum=5.430;DP=765;FS=4.258;HRun=0;HaplotypeScore=78.8313;InbreedingCoeff=0.0303;MQ=34.80;MQ0=155;MQRankSum=-3.898;QD=0.30;ReadPosRankSum=-1.401;VQSLOD=1.2824;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:30:30.07:0,30,515	0/1:8,0:5:2.44:2,0,21	./.	./.	0/0:28,0:18:11.87:0,12,194	0/1:27,0:17:0.34:0,0,173	0/0:27,0:11:20.90:0,21,305	0/0:20,0:11:23.83:0,24,219	0/0:35,0:29:17.75:0,18,463	0/0:34,0:18:51.17:0,51,926	0/0:22,0:14:10.84:0,11,124	0/0:37,0:13:7.17:0,7,60	0/1:26,6:21:99:120,0,131	1/1:28,0:14:1.25:3,1,0	0/0:26,0:22:21.68:0,22,275	0/0:36,0:27:19.33:0,19,615	0/1:52,0:34:8.30:8,0,177	0/0:24,0:14:5.90:0,6,40	0/0:19,0:10:12.01:0,12,132	./.	0/0:23,0:10:9.02:0,9,94	0/0:30,0:22:21.72:0,22,330	0/0:21,0:11:17.45:0,17,127	0/0:57,0:26:19.71:0,20,268	0/1:19,3:12:7.50:8,0,25	0/0:30,0:20:38.84:0,39,847	0/0:20,0:13:29.26:0,29,309	0/0:52,0:25:5.96:0,6,132
chr10	107321697	.	TCTG	T	544.68	PASS	AB=0.949;AC=22;AF=0.440;AN=50;BaseQRankSum=2.286;DP=755;FS=8.324;HRun=0;HaplotypeScore=75.5616;InbreedingCoeff=-0.1070;MQ=34.63;MQ0=151;MQRankSum=-5.217;QD=1.08;ReadPosRankSum=-1.959;VQSLOD=0.2206;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:26:23.63:0,24,186	1/1:8,0:5:5.35:38,5,0	./.	./.	0/1:22,3:17:23.98:24,0,38	0/0:27,0:17:2.50:0,3,134	0/0:23,0:9:16.79:0,17,76	1/1:22,0:13:15.24:37,15,0	0/1:24,9:27:74.37:74,0,118	0/0:35,0:19:22.39:0,22,297	0/1:23,0:15:12.05:57,0,12	0/0:35,0:12:4.56:0,5,56	0/1:30,0:19:19.68:142,0,20	1/1:20,8:14:2.92:17,3,0	0/1:29,0:25:2.49:2,0,120	0/1:30,6:27:17.95:18,0,122	0/1:51,0:32:25.28:36,0,25	0/0:25,0:15:5.79:0,6,37	0/1:23,0:11:5.40:5,0,57	./.	1/1:23,0:10:2.53:9,3,0	0/0:29,2:23:14.88:0,15,121	0/1:19,0:9:24.20:61,0,24	0/1:54,0:23:10.40:31,0,10	1/1:18,0:8:4.94:22,5,0	0/1:25,5:20:99:107,0,219	0/0:23,0:16:3.96:0,4,203	0/1:52,0:25:15.06:15,0,39
chr10	107321813	.	TCCTC	T	465.60	PASS	AB=0.926;AC=9;AF=0.173;AN=52;BaseQRankSum=-0.134;DP=377;FS=26.283;HRun=0;HaplotypeScore=70.6405;InbreedingCoeff=0.4707;MQ=45.68;MQ0=57;MQRankSum=-0.083;QD=4.35;ReadPosRankSum=1.155;VQSLOD=0.0809;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:19:45.56:46,0,239	0/0:3,0:3:7.27:0,7,150	0/1:35,0:7:8.11:8,0,178	0/0:48,0:9:13.45:0,13,120	0/0:8,0:8:12.04:0,12,237	0/0:14,0:11:24.55:0,25,451	0/0:15,0:11:23.55:0,24,389	1/1:5,8:8:15.49:189,15,0	0/0:15,0:13:17.98:0,18,372	0/0:13,0:10:24.05:0,24,506	0/0:8,0:6:9.01:0,9,154	0/0:9,0:6:17.99:0,18,268	0/0:12,0:7:14.72:0,15,256	0/0:8,0:6:6.02:0,6,92	0/0:16,0:16:33.03:0,33,633	0/0:9,0:9:14.75:0,15,324	0/0:18,0:14:30.57:0,31,708	0/0:6,0:6:15:0,15,279	0/1:7,1:6:54.10:137,0,54	1/1:3,15:18:9.01:136,9,0	./.	0/0:15,0:9:13.08:0,13,308	0/0:9,0:9:14.54:0,15,303	0/0:10,0:9:11.89:0,12,207	0/0:7,0:7:18.06:0,18,350	0/0:16,0:12:33.11:0,33,766	1/1:5,3:6:6.02:92,6,0	./.
chr10	107322027	.	TAC	T	393.25	PASS	AB=1.000;AC=13;AF=0.342;AN=38;BaseQRankSum=2.942;DP=126;FS=10.484;HRun=0;HaplotypeScore=22.4160;InbreedingCoeff=0.5346;MQ=68.49;MQ0=5;MQRankSum=-0.229;QD=9.59;ReadPosRankSum=-2.542;VQSLOD=1.0375;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:12.49:0,12,186	1/1:2,0:2:2.99:24,3,0	./.	0/1:11,0:3:1.09:1,0,17	./.	0/0:1,0:1:3:0,3,25	0/0:2,0:2:6.01:0,6,83	1/1:0,14:14:41.72:310,42,0	0/0:2,0:2:3.01:0,3,57	0/0:2,0:2:6.01:0,6,57	./.	0/0:6,0:6:3.01:0,3,32	./.	./.	./.	./.	0/0:15,0:15:45.09:0,45,673	0/0:15,0:14:36.06:0,36,594	1/1:4,0:4:11.96:97,12,0	1/1:2,0:2:3:25,3,0	1/1:3,0:3:3:25,3,0	./.	0/0:2,0:2:3:0,3,25	./.	0/0:6,0:6:12.01:0,12,165	0/0:4,0:4:12.01:0,12,150	1/1:5,0:5:5.95:43,6,0	0/0:4,0:2:2.98:0,3,22
chr10	107322441	.	A	ATAG	10805.67	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-9.567;DP=800;FS=22.163;HRun=0;HaplotypeScore=108.8248;InbreedingCoeff=0.9978;MQ=78.27;MQ0=0;MQRankSum=-8.710;QD=57.78;ReadPosRankSum=-2.560;VQSLOD=3.5885;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,1985	1/1:1,13:15:42.14:941,42,0	0/0:24,0:24:58.89:0,59,677	0/0:13,0:13:16.99:0,17,384	0/0:25,0:25:72.25:0,72,1196	0/0:30,0:30:84.25:0,84,1336	0/0:31,0:31:84.29:0,84,1399	1/1:11,29:42:99:2431,114,0	0/0:31,0:31:90.29:0,90,1474	0/0:35,0:35:99:0,102,1668	0/0:13,0:13:39.12:0,39,618	0/0:28,0:28:78.22:0,78,1218	0/0:26,0:26:78.27:0,78,1294	0/0:23,0:23:66.23:0,66,1098	0/0:47,0:47:99:0,132,2140	0/0:47,0:47:99:0,132,2171	0/0:28,0:28:78.27:0,78,1289	0/0:26,0:26:78.27:0,78,1290	1/1:4,17:21:57.18:1222,57,0	1/1:3,21:24:60.21:1357,60,0	1/1:5,43:50:99:2717,120,0	0/0:24,0:24:63.20:0,63,1024	0/0:21,0:21:60.17:0,60,947	0/0:33,0:33:90.26:0,90,1437	0/0:12,0:12:36.11:0,36,576	0/0:41,0:41:99:0,120,1944	1/1:4,29:33:96.33:2138,96,0	0/0:11,0:11:33.06:0,33,494
chr10	107324328	.	AT	A	2743.41	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.102;DP=556;FS=3.230;HRun=3;HaplotypeScore=58.5335;InbreedingCoeff=0.9948;MQ=74.45;MQ0=0;MQRankSum=-0.051;QD=27.71;ReadPosRankSum=-1.917;VQSLOD=2.3162;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1521	1/1:3,6:9:15.05:183,15,0	0/0:8,0:8:23.95:0,24,316	0/0:14,1:14:29.98:0,30,302	0/0:13,0:13:33.07:0,33,421	0/0:14,0:14:42.11:0,42,566	0/0:45,0:45:99:0,135,1800	1/1:0,11:11:33.06:362,33,0	0/0:19,0:19:57.16:0,57,774	0/0:16,0:16:39.10:0,39,501	0/0:12,0:12:33.10:0,33,443	0/0:25,0:25:72.20:0,72,980	0/0:16,0:16:42.13:0,42,584	0/0:18,0:18:54.17:0,54,756	0/0:23,0:23:69.21:0,69,956	0/0:21,0:21:60.18:0,60,829	0/0:36,0:36:99:0,105,1424	0/0:30,0:30:90.26:0,90,1267	1/1:0,15:15:45.08:504,45,0	1/1:0,10:10:27.04:316,27,0	1/1:1,42:43:99:1216,99,0	0/0:18,0:18:45.14:0,45,617	0/0:10,0:10:27.03:0,27,352	0/0:34,0:34:99:0,102,1366	0/0:19,0:19:51.06:0,51,627	0/0:18,0:18:51.16:0,51,717	1/1:0,11:11:29.99:350,30,0	0/0:9,0:9:21.65:0,22,323
chr10	107325503	.	T	TGTTTG	3053.93	PASS	AB=0.600;AC=9;AF=0.161;AN=56;BaseQRankSum=-2.203;DP=621;FS=4.229;HRun=0;HaplotypeScore=140.9511;InbreedingCoeff=0.8272;MQ=45.19;MQ0=36;MQRankSum=-5.229;QD=24.63;ReadPosRankSum=0.913;VQSLOD=3.3576;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:37:35.68:0,36,1049	0/0:7,0:6:18:0,18,260	0/0:18,0:4:12.03:0,12,184	0/0:10,0:3:7.83:0,8,71	0/0:24,0:22:38.80:0,39,632	0/0:22,0:22:56.89:0,57,845	0/0:29,0:28:54.01:0,54,962	1/1:4,22:31:51.58:760,52,0	0/0:20,0:19:53.57:0,54,785	0/0:28,0:28:74.74:0,75,1119	0/0:13,0:10:23.58:0,24,245	0/0:12,0:12:30.83:0,31,457	0/0:28,0:26:70.75:0,71,1006	0/0:16,0:16:44.71:0,45,584	0/0:17,0:17:44.05:0,44,616	0/0:25,0:25:69.22:0,69,1111	0/0:37,0:31:48.83:0,49,1393	0/0:22,0:16:9.03:0,9,359	1/1:19,6:25:29.03:870,29,0	1/1:4,22:26:38.11:980,38,0	0/1:5,8:12:21.78:181,0,22	0/0:20,0:19:41.98:0,42,610	0/0:15,0:15:36.19:0,36,505	0/0:22,0:20:29.32:0,29,565	0/0:25,0:24:63.92:0,64,1030	0/0:28,0:28:72.78:0,73,1068	1/1:3,18:21:18.53:427,19,0	0/0:15,0:12:32.93:0,33,404
chr10	107328183	.	CTA	C	4444.02	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.443;DP=719;FS=9.976;HRun=0;HaplotypeScore=104.2736;InbreedingCoeff=0.9987;MQ=57.56;MQ0=2;MQRankSum=-3.679;QD=37.03;ReadPosRankSum=0.325;VQSLOD=6.3629;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,2713	1/1:0,9:9:21.07:320,21,0	0/0:24,0:16:48.16:0,48,912	0/0:30,0:23:37.76:0,38,1057	0/0:22,0:22:66.23:0,66,1264	0/0:21,0:21:63.20:0,63,1169	0/0:42,0:42:99:0,123,2342	1/1:0,18:18:54.18:825,54,0	0/0:32,0:32:96.32:0,96,1818	0/0:26,0:26:75.26:0,75,1446	0/0:9,0:9:24.08:0,24,464	0/0:27,0:27:81.28:0,81,1545	0/0:27,0:27:81.28:0,81,1518	0/0:19,0:19:57.19:0,57,1071	0/0:27,0:27:81.28:0,81,1555	0/0:25,0:25:75.26:0,75,1449	0/0:29,0:29:87.30:0,87,1680	0/0:29,0:28:87.26:0,87,1625	1/1:3,22:24:66.22:1005,66,0	1/1:0,15:15:36.12:550,36,0	1/1:0,35:35:71.96:1102,72,0	0/0:23,0:23:69.24:0,69,1300	0/0:22,0:22:63.22:0,63,1208	0/0:36,0:36:99:0,105,1999	0/0:30,0:30:90.30:0,90,1676	0/0:28,0:28:84.29:0,84,1598	1/1:0,18:18:42.14:643,42,0	0/0:23,0:23:69.24:0,69,1333
chr10	107328831	.	C	CATT	553.70	PASS	AB=0.963;AC=21;AF=0.477;AN=44;BaseQRankSum=2.725;DP=138;FS=14.952;HRun=0;HaplotypeScore=140.5196;InbreedingCoeff=-0.1195;MQ=28.77;MQ0=7;MQRankSum=-1.536;QD=4.86;ReadPosRankSum=3.114;VQSLOD=1.9162;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:6,3:9:17.17:201,0,17	./.	0/0:6,0:2:2.98:0,3,21	0/1:11,0:11:12.39:12,0,37	0/0:2,0:2:0.19:0,0,20	1/1:3,0:3:7.08:45,7,0	0/0:3,0:2:2.46:0,2,51	./.	0/1:16,0:14:6.61:7,0,163	1/1:5,0:4:3.45:22,3,0	0/0:2,0:2:5.23:0,5,63	0/0:1,0:1:3.01:0,3,48	0/0:2,0:2:3.01:0,3,56	1/1:1,0:1:2.04:6,2,0	0/0:1,0:1:3.01:0,3,56	0/1:2,0:2:1.59:7,0,2	./.	./.	0/1:10,1:11:33.55:60,0,34	./.	0/1:15,0:15:54.33:54,0,97	0/1:6,0:5:2.14:33,0,2	1/1:1,0:1:0.47:1,0,0	0/1:16,0:14:48.50:49,0,237	0/1:6,0:6:73.18:73,0,91	1/1:1,1:2:2.54:69,3,0	1/1:10,0:10:0.28:36,0,0
chr10	107328843	.	C	CTAT	288.23	PASS	AB=0.985;AC=19;AF=0.339;AN=56;BaseQRankSum=6.896;DP=351;FS=67.100;HRun=0;HaplotypeScore=371.3140;InbreedingCoeff=-0.2237;MQ=40.51;MQ0=8;MQRankSum=-5.585;QD=1.22;ReadPosRankSum=1.939;VQSLOD=-0.2045;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:1.99:15,2,0	0/1:14,0:14:3.78:4,0,119	0/0:6,0:3:8.09:0,8,47	0/1:9,0:5:4.22:4,0,144	0/1:20,1:21:2.44:43,0,2	0/0:9,0:9:15.80:0,16,203	0/1:17,0:17:6.34:6,0,176	0/0:21,0:20:14.27:0,14,346	0/1:9,0:9:13.21:13,0,219	0/1:27,2:27:99:111,0,286	0/1:16,0:15:39.18:39,0,54	0/0:14,0:14:11.69:0,12,328	0/0:7,0:7:17.38:0,17,208	0/0:9,0:9:3.60:0,4,71	0/1:6,0:6:7:7,0,82	0/1:7,0:7:11.93:12,0,154	0/0:5,0:5:9:0,9,94	1/1:1,0:1:0.89:2,1,0	0/1:7,0:6:3.32:3,0,25	0/1:14,1:15:27.33:27,0,47	0/0:5,0:3:6:0,6,104	0/1:28,0:28:98.92:99,0,167	0/1:16,1:16:34.81:35,0,64	0/0:3,0:3:2.54:0,3,19	0/1:26,0:24:5.05:5,0,372	0/0:17,0:17:19.95:0,20,240	0/1:9,0:9:3.25:3,0,58	0/0:19,0:19:18.59:0,19,387
chr10	107328854	.	TC	T	1097.60	PASS	AB=0.844;AC=19;AF=0.339;AN=56;BaseQRankSum=3.033;DP=395;FS=123.427;HRun=2;HaplotypeScore=128.1702;InbreedingCoeff=-0.5049;MQ=43.81;MQ0=6;MQRankSum=-7.165;QD=3.62;ReadPosRankSum=2.727;VQSLOD=-0.6218;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,1:8:12.04:0,12,179	0/1:10,3:13:99:149,0,135	0/0:9,0:6:12.82:0,13,182	0/0:11,0:5:13.28:0,13,167	0/1:20,2:22:0.18:0,0,40	0/1:6,3:9:95.87:96,0,112	0/1:17,4:21:99:117,0,292	0/0:27,0:26:75.05:0,75,830	0/0:9,0:9:15.05:0,15,225	0/1:20,7:26:99:190,0,529	0/1:14,4:17:39.08:39,0,125	0/1:13,2:15:45.77:46,0,322	0/1:10,1:11:12.38:12,0,331	0/0:6,2:8:8.20:0,8,66	0/1:7,1:8:23.39:23,0,161	0/1:9,1:10:17.24:17,0,249	0/0:7,0:7:15.05:0,15,217	0/1:1,1:2:32.31:32,0,39	0/1:8,4:11:99:121,0,157	0/1:11,2:13:75.64:76,0,150	0/0:8,0:6:15.05:0,15,225	0/1:23,4:27:98.16:98,0,264	0/1:18,3:20:46.47:46,0,138	0/0:4,1:5:8.99:0,9,110	0/1:21,2:22:57.26:57,0,213	0/1:17,3:20:27.65:28,0,441	0/1:9,2:11:8.28:8,0,282	0/1:16,4:20:96.66:97,0,475
chr10	107329476	.	CAG	C	520.27	PASS	AB=0.935;AC=25;AF=0.481;AN=52;BaseQRankSum=5.637;DP=590;FS=6.805;HRun=0;HaplotypeScore=84.7597;InbreedingCoeff=-0.3164;MQ=66.40;MQ0=7;MQRankSum=1.848;QD=1.21;ReadPosRankSum=0.074;VQSLOD=0.9563;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:28,6:35:36.04:36,0,413	1/1:12,0:12:2.83:14,3,0	./.	./.	0/1:12,2:14:12.60:13,0,184	0/0:15,0:16:6.88:0,7,233	0/0:36,0:36:6.31:0,6,450	1/1:17,0:17:5.81:34,6,0	0/1:21,0:20:37.05:37,0,303	0/1:15,1:16:60.18:60,0,219	0/1:11,4:15:16.84:17,0,225	0/1:29,0:29:70.90:71,0,457	0/1:12,1:14:20.79:21,0,160	0/1:24,1:25:59.93:60,0,233	0/1:24,0:24:31.11:31,0,340	0/0:19,0:24:19.76:0,20,223	0/1:25,1:27:3.23:3,0,476	0/0:18,2:19:8.51:0,9,431	0/1:17,0:15:2.86:14,0,3	1/1:11,0:11:8.98:73,9,0	0/1:40,0:39:0.09:0,0,0	0/0:19,0:20:14.96:0,15,189	0/1:18,0:19:14.93:15,0,173	0/1:26,1:28:51.73:52,0,304	0/1:15,1:17:16.66:17,0,255	0/1:14,2:16:31.42:31,0,347	1/1:18,0:18:2.90:16,3,0	0/1:12,0:12:55.48:55,0,188
chr10	107329483	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGC	A	246.66	PASS	AB=1.000;AC=3;AF=0.056;AN=54;BaseQRankSum=2.731;DP=607;FS=6.023;HRun=0;HaplotypeScore=368.2128;InbreedingCoeff=0.4346;MQ=63.00;MQ0=9;MQRankSum=0.090;QD=7.96;ReadPosRankSum=-1.446;VQSLOD=1.0342;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:72.23:0,72,6557	1/1:3,11:14:6.25:250,6,0	./.	0/0:31,0:13:6.49:0,6,355	0/0:16,0:16:30.09:0,30,3219	0/0:14,0:13:30.10:0,30,2571	0/0:36,0:36:60.21:0,60,5835	0/0:14,0:14:24.08:0,24,514	0/0:21,0:20:48.16:0,48,5108	0/0:23,0:23:56.22:0,56,5713	0/0:19,0:19:39.13:0,39,4419	0/0:27,0:27:66.23:0,66,6424	0/0:14,0:13:30.99:0,31,2660	0/0:25,0:24:51.16:0,51,4707	0/0:22,0:21:51.18:0,51,4174	0/0:24,0:23:48.16:0,48,4624	0/0:30,0:30:69.69:0,70,7236	0/0:19,0:18:43.70:0,44,4579	0/0:15,0:13:24.08:0,24,616	0/0:9,0:9:18.06:0,18,444	0/0:41,0:41:1.57:0,2,39	0/0:20,0:20:21.44:0,21,1628	0/0:21,0:21:36.12:0,36,2820	0/0:25,0:25:60.21:0,60,4942	0/0:21,0:21:48.16:0,48,5010	0/0:20,0:20:57.18:0,57,4952	0/1:17,0:17:90.55:91,0,222	0/0:16,0:14:35.71:0,36,3213
chr10	107329507	.	AGAGAGCGAGAGAGAGAGAGAGAGCGC	A	980.58	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=1.951;DP=725;FS=0.000;HRun=0;HaplotypeScore=339.9951;InbreedingCoeff=0.7231;MQ=61.45;MQ0=28;MQRankSum=0.059;QD=8.76;ReadPosRankSum=-5.466;VQSLOD=0.7471;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:75.23:0,75,5662	0/1:11,0:11:1.82:153,0,2	0/0:52,0:15:33.25:0,33,693	0/0:77,0:29:53.82:0,54,1432	0/0:23,0:21:39.13:0,39,3015	0/0:14,0:14:33.07:0,33,2246	0/0:28,0:28:63.16:0,63,5169	1/1:14,0:12:21.78:494,22,0	0/0:26,0:26:69.22:0,69,4917	0/0:29,0:28:81.74:0,82,5525	0/0:19,0:18:42.13:0,42,3826	0/0:33,0:32:84.29:0,84,5839	0/0:15,0:14:39.59:0,40,2152	0/0:22,0:21:60.19:0,60,4396	0/0:27,0:26:57.21:0,57,4228	0/0:25,0:24:63.21:0,63,4454	0/0:33,0:33:93.30:0,93,6659	0/0:24,0:23:57.15:0,57,4147	0/1:7,0:5:6.37:131,0,6	1/1:11,0:11:8.98:73,9,0	1/1:10,38:48:4.26:69,4,0	0/0:20,0:20:14.87:0,15,1076	0/0:19,0:19:12.52:0,13,2308	0/0:24,0:24:63.22:0,63,4830	0/0:22,0:21:57.18:0,57,4428	0/0:25,0:25:75.20:0,75,4369	1/1:4,17:21:2.39:209,2,0	0/0:22,0:20:50.64:0,51,3248
chr10	107329513	.	C	CGA	34.14	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=3.392;DP=712;FS=6.218;HRun=0;HaplotypeScore=104.2790;InbreedingCoeff=0.5501;MQ=64.72;MQ0=26;MQRankSum=0.609;QD=0.32;ReadPosRankSum=-1.391;VQSLOD=1.3375;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:54.56:0,55,561	0/0:12,0:12:2.58:0,3,13	0/0:57,0:20:21.93:0,22,202	0/0:79,0:29:39.23:0,39,357	0/0:21,0:19:31.56:0,32,327	0/0:13,0:13:24.06:0,24,275	0/0:27,0:27:54.14:0,54,634	1/1:14,0:12:1.41:2,1,0	0/0:29,0:28:54.10:0,54,605	0/0:29,0:28:58.41:0,58,614	0/0:19,0:18:32.97:0,33,367	0/0:33,0:32:60.10:0,60,668	0/1:13,0:13:13.84:14,0,142	0/0:20,0:19:52.97:0,53,533	0/0:28,0:27:47.43:0,47,560	0/0:26,0:25:34.02:0,34,292	0/0:34,0:34:68.94:0,69,794	0/0:22,0:22:38.15:0,38,419	1/1:6,0:4:3:28,3,0	0/1:10,0:10:0:0,0,0	0/1:41,0:41:0.31:0,0,0	1/1:8,13:22:5.58:96,6,0	0/0:16,0:17:22.72:0,23,215	0/0:24,0:24:50.21:0,50,659	0/0:21,0:20:42.38:0,42,424	0/0:22,0:23:47.49:0,47,485	0/0:18,0:18:2.59:0,3,14	0/0:21,0:20:34.72:0,35,345
chr10	107329529	.	AGCGC	A	979.78	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=5.512;DP=719;FS=9.879;HRun=0;HaplotypeScore=125.0439;InbreedingCoeff=0.7575;MQ=71.25;MQ0=20;MQRankSum=4.023;QD=8.75;ReadPosRankSum=-3.424;VQSLOD=0.7746;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:80.74:0,81,1579	0/0:12,0:12:4.05:0,4,94	0/0:59,0:22:31.88:0,32,356	0/0:87,0:37:32.65:0,33,624	0/0:17,0:16:39.05:0,39,870	0/0:14,0:14:39.11:0,39,777	0/0:33,0:33:90.28:0,90,2035	1/1:2,19:19:54.12:743,54,0	0/0:31,0:30:81.24:0,81,1859	0/0:29,0:28:71.60:0,72,1630	0/0:14,0:13:36:0,36,874	0/0:30,0:30:84.26:0,84,1886	0/1:13,0:13:3.75:4,0,463	0/0:19,0:18:53.96:0,54,1098	0/0:27,0:26:75.19:0,75,1758	0/0:21,0:20:54.17:0,54,1331	0/0:34,0:34:87.17:0,87,2007	0/0:23,0:23:60.12:0,60,1306	1/1:8,0:7:20.73:303,21,0	1/1:0,15:15:5.92:39,6,0	0/1:38,0:38:0:0,0,0	0/0:21,0:21:17.50:0,18,293	0/0:14,0:14:23.58:0,24,528	0/0:29,0:29:74.32:0,74,1931	0/0:21,0:20:54.13:0,54,1158	0/0:18,0:18:53.73:0,54,1180	1/1:17,0:17:2.75:34,3,0	0/0:20,0:20:49.98:0,50,994
chr10	107330827	.	GCA	G	379.39	PASS	AB=0.882;AC=17;AF=0.327;AN=52;BaseQRankSum=4.657;DP=529;FS=0.756;HRun=0;HaplotypeScore=65.7670;InbreedingCoeff=-0.1708;MQ=58.93;MQ0=15;MQRankSum=0.249;QD=1.28;ReadPosRankSum=-0.380;VQSLOD=0.9256;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,3:28:49.98:50,0,117	0/1:7,1:8:23.49:23,0,80	./.	./.	0/1:21,4:25:41:41,0,222	0/1:15,3:17:64.53:65,0,293	0/1:19,1:22:29.84:30,0,223	0/0:18,0:17:2.97:0,3,20	0/1:20,0:20:4.09:4,0,246	0/0:16,0:16:9.03:0,9,128	0/0:8,0:8:6.01:0,6,69	0/0:10,0:10:6:0,6,51	0/0:11,0:11:12.04:0,12,177	0/0:18,1:18:0.58:0,1,386	0/0:17,0:18:0.85:0,1,163	0/1:14,2:16:37.95:38,0,285	0/0:21,0:21:5.47:0,5,325	0/1:23,4:26:33.17:33,0,298	1/1:23,0:23:3.01:33,3,0	1/1:10,0:13:2.84:14,3,0	1/1:30,13:43:8.99:98,9,0	0/0:10,0:10:9.03:0,9,133	0/0:14,0:14:18.05:0,18,244	0/1:34,2:35:22.90:23,0,490	0/0:8,0:12:6.01:0,6,69	0/0:7,0:7:12.04:0,12,166	0/1:3,2:8:29.85:60,0,30	0/1:8,1:10:14.47:14,0,184
chr10	107331671	.	TCGGGG	T	2687.78	PASS	AB=0.750;AC=12;AF=0.214;AN=56;BaseQRankSum=9.023;DP=346;FS=8.867;HRun=0;HaplotypeScore=76.0756;InbreedingCoeff=0.6826;MQ=75.09;MQ0=0;MQRankSum=-6.333;QD=23.37;ReadPosRankSum=8.619;VQSLOD=1.0550;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:38.05:0,38,414	0/1:0,0:5:12.98:24,0,13	0/0:15,0:11:9.68:0,10,299	0/1:11,0:7:18.57:19,0,78	0/0:6,0:6:8.99:0,9,74	0/0:4,0:4:11.95:0,12,93	0/0:23,0:23:65.95:0,66,816	1/1:0,20:21:46.37:881,46,0	0/0:11,0:11:30.05:0,30,419	0/0:8,0:8:20.98:0,21,214	0/0:2,0:2:0:0,0,0	0/0:9,0:9:26.95:0,27,270	0/0:11,0:11:32.93:0,33,364	0/0:11,0:11:20.94:0,21,199	0/0:12,0:12:26.94:0,27,286	0/0:11,0:11:29.99:0,30,328	0/0:22,0:22:62.86:0,63,699	0/0:22,0:22:53.60:0,54,589	1/1:0,18:18:54.01:944,54,0	1/1:0,5:5:5.84:132,6,0	1/1:1,38:39:14.79:330,15,0	0/0:6,0:6:18:0,18,199	0/0:2,0:2:2.97:0,3,20	0/0:19,0:20:59.92:0,60,655	0/0:6,0:6:11.96:0,12,121	0/0:8,0:8:20.28:0,20,179	1/1:0,16:16:24:530,24,0	0/0:5,0:5:15.01:0,15,214
chr10	107333134	.	AC	A	3059.26	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.513;DP=568;FS=0.000;HRun=3;HaplotypeScore=59.6009;InbreedingCoeff=0.9987;MQ=82.25;MQ0=0;MQRankSum=-0.669;QD=31.54;ReadPosRankSum=-0.824;VQSLOD=3.0467;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.29:0,90,1276	0/0:10,0:10:27.09:0,27,389	0/0:16,0:16:42:0,42,527	0/0:17,0:17:45.04:0,45,556	0/0:23,0:23:69.23:0,69,988	0/0:20,0:20:60.20:0,60,864	0/0:15,0:15:42.11:0,42,564	1/1:0,20:20:60.19:743,60,0	0/0:22,0:22:63.21:0,63,907	0/0:15,0:15:45.14:0,45,631	0/0:18,0:18:48.15:0,48,674	0/0:28,0:28:84.26:0,84,1174	0/0:13,0:13:39.13:0,39,562	0/0:19,0:19:57.19:0,57,819	0/0:13,0:13:39.13:0,39,562	0/0:15,0:15:45.15:0,45,648	0/0:31,0:31:93.30:0,93,1316	0/0:29,0:29:84.28:0,84,1205	1/1:2,7:9:21.07:260,21,0	1/1:0,18:18:35.79:446,36,0	1/1:1,22:23:63.20:781,63,0	0/0:22,0:22:63.20:0,63,889	0/0:24,0:24:72.23:0,72,1018	0/0:26,0:26:78.26:0,78,1120	0/0:21,0:21:54.17:0,54,760	0/0:24,0:24:69.21:0,69,956	1/1:0,27:27:81.25:1004,81,0	0/0:17,0:17:51.17:0,51,734
chr10	107333206	.	A	AC	3918.74	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-8.917;DP=550;FS=1.854;HRun=4;HaplotypeScore=54.4177;InbreedingCoeff=0.9865;MQ=81.67;MQ0=0;MQRankSum=-1.764;QD=33.78;ReadPosRankSum=-1.706;VQSLOD=3.5272;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,1528	1/1:3,3:6:9.02:123,9,0	0/0:27,0:27:57.09:0,57,710	0/0:16,0:16:36.99:0,37,410	0/0:16,0:16:48.14:0,48,544	0/0:18,0:18:48.12:0,48,533	0/0:31,0:31:75.21:0,75,850	1/1:3,34:37:99:1349,99,0	0/0:23,0:23:69.17:0,69,762	0/0:17,0:17:51.14:0,51,571	0/0:16,0:16:42.11:0,42,469	0/0:22,0:22:60.17:0,60,680	0/0:11,0:11:24.07:0,24,272	0/0:18,0:18:51.15:0,51,577	0/0:13,0:13:39.11:0,39,442	0/0:11,0:11:33.09:0,33,374	0/0:31,0:31:90.23:0,90,1009	0/0:23,0:23:69.20:0,69,783	1/1:4,8:12:24.07:313,24,0	1/1:4,20:24:63.21:858,63,0	1/1:5,19:24:63.19:844,63,0	0/0:10,0:10:27.08:0,27,305	0/0:18,0:18:48.14:0,48,544	0/0:22,0:22:60.17:0,60,680	0/0:19,0:19:57.16:0,57,646	0/0:16,0:16:45.13:0,45,510	1/1:3,10:13:33.08:431,33,0	0/0:9,0:9:24.07:0,24,272
chr10	107334492	.	TACACACACACACAC	T	85.58	PASS	AB=0.800;AC=9;AF=0.196;AN=46;BaseQRankSum=2.163;DP=532;FS=2.169;HRun=0;HaplotypeScore=172.4071;InbreedingCoeff=0.5086;MQ=47.48;MQ0=53;MQRankSum=-1.118;QD=0.89;ReadPosRankSum=-2.410;VQSLOD=2.6009;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:31:15.05:0,15,393	./.	./.	./.	0/0:15,0:13:9.03:0,9,238	0/0:18,0:17:9.03:0,9,336	0/0:27,0:26:2.91:0,3,56	./.	0/0:8,0:7:3.01:0,3,66	0/0:25,0:23:22.87:0,23,327	0/1:9,0:9:0:1,0,0	1/1:18,0:18:3.01:62,3,0	0/0:14,0:13:9.49:0,9,345	0/0:19,0:18:12.04:0,12,354	0/0:18,0:18:10.81:0,11,202	0/0:29,0:29:24.08:0,24,755	0/0:31,0:28:20.99:0,21,536	0/0:20,0:19:7.84:0,8,179	1/1:13,0:12:2.97:104,3,0	1/1:13,4:16:2.97:21,3,0	1/1:35,0:26:0.47:1,0,0	0/0:14,0:14:11.71:0,12,308	0/0:13,0:12:11.38:0,11,421	0/0:38,0:32:18.06:0,18,533	0/0:13,0:12:11.53:0,12,389	0/0:22,0:22:33.10:0,33,816	./.	0/0:12,0:6:3.01:0,3,134
chr10	107336898	.	TA	T	1844.07	PASS	AC=30;AF=0.833;AN=36;BaseQRankSum=-3.586;DP=61;FS=37.676;HRun=1;HaplotypeScore=31.0371;InbreedingCoeff=0.4630;MQ=84.23;MQ0=0;MQRankSum=-3.586;QD=35.46;ReadPosRankSum=2.825;VQSLOD=1.1836;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:6.02:65,6,0	./.	0/0:6,0:6:10.50:0,11,129	./.	0/0:0,1:1:0.47:0,0,1	1/1:0,2:2:6.02:80,6,0	1/1:0,5:5:15.01:179,15,0	./.	1/1:0,2:2:6.02:83,6,0	1/1:0,3:3:9.03:125,9,0	./.	1/1:0,3:3:9.03:114,9,0	1/1:0,4:4:12.04:164,12,0	1/1:0,4:4:12:144,12,0	1/1:0,3:3:9.03:123,9,0	1/1:0,2:2:6.02:83,6,0	1/1:0,10:10:24.08:330,24,0	1/1:0,4:4:12.04:162,12,0	./.	./.	./.	./.	1/1:0,1:1:3.01:42,3,0	0/0:0,1:1:0.47:0,0,1	1/1:0,1:2:6.02:82,6,0	./.	./.	1/1:0,4:4:12.04:164,12,0
chr10	107337296	.	T	TGTGTGTGTCC	5855.44	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-3.123;DP=1012;FS=2.730;HRun=0;HaplotypeScore=313.0435;InbreedingCoeff=0.9784;MQ=53.92;MQ0=17;MQRankSum=-2.683;QD=28.84;ReadPosRankSum=-6.843;VQSLOD=2.5960;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:71.76:0,72,1719	0/0:10,0:9:15.60:0,16,236	0/0:45,0:12:8.31:0,8,170	0/0:50,0:20:17.29:0,17,240	0/0:21,0:21:51.17:0,51,1308	0/0:34,0:33:65.45:0,65,1622	0/0:37,0:37:58.98:0,59,1939	1/1:30,0:52:99:1747,101,0	0/0:43,0:43:99:0,117,3027	0/0:31,0:31:80.93:0,81,1647	0/0:10,0:10:27.06:0,27,690	0/0:43,0:43:96.31:0,96,2440	0/0:42,0:41:24.56:0,25,576	0/0:40,0:40:93.32:0,93,2292	0/0:52,0:52:99:0,132,2952	0/0:48,0:48:99:0,120,2926	0/0:51,0:51:99:0,120,3008	0/0:23,0:23:56.57:0,57,1060	1/1:5,0:19:47.99:909,48,0	1/1:4,15:27:32.78:559,33,0	1/1:64,1:70:92.35:1356,92,0	0/0:31,0:31:72.25:0,72,1853	0/0:22,0:22:51.17:0,51,1201	0/0:64,0:63:99:0,142,3310	0/0:21,0:21:44.97:0,45,1083	0/0:31,0:31:84.28:0,84,1651	1/1:3,16:22:36.10:1285,36,0	0/0:19,0:19:45.15:0,45,1109
chr10	107337788	.	GTGC	G	8808.19	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=-13.359;DP=1037;FS=0.570;HRun=0;HaplotypeScore=433.6053;InbreedingCoeff=0.6399;MQ=54.44;MQ0=1;MQRankSum=-9.129;QD=28.51;ReadPosRankSum=-9.672;VQSLOD=2.4347;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:10.32:10,0,101	1/1:0,19:19:45.15:755,45,0	0/1:23,0:20:84.76:85,0,158	0/1:15,0:12:76.27:76,0,100	0/0:30,0:30:59.31:0,59,229	0/0:28,0:28:26.63:0,27,211	0/0:29,0:29:19.38:0,19,179	1/1:5,56:61:99:2508,153,0	0/0:50,0:50:88.73:0,89,383	0/0:60,0:60:46.32:0,46,406	0/0:27,0:27:55.41:0,55,211	0/0:53,0:53:95.17:0,95,410	0/0:49,0:49:34.03:0,34,260	0/0:51,0:51:37.33:0,37,298	0/0:66,0:66:99:0,113,489	0/0:49,0:49:78.32:0,78,321	0/1:23,0:23:39.72:40,0,89	0/0:20,0:20:26.38:0,26,133	1/1:1,13:14:42.07:622,42,0	1/1:1,38:38:99:1725,102,0	1/1:14,39:52:99:1968,117,0	0/0:41,0:40:86.45:0,86,329	0/0:35,0:35:57.12:0,57,219	0/0:41,0:41:15.25:0,15,153	0/0:40,0:39:80.49:0,80,310	0/0:40,0:40:25.22:0,25,261	1/1:1,27:27:60.21:1020,60,0	0/0:19,0:19:6.79:0,7,77
chr10	107337863	.	TAAAAA	T	13148.24	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=1.294;DP=810;FS=2.267;HRun=6;HaplotypeScore=481.7640;InbreedingCoeff=0.5109;MQ=33.38;MQ0=1;MQRankSum=-0.333;QD=16.44;ReadPosRankSum=5.714;VQSLOD=-0.0754;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,2:14:23.69:162,24,0	1/1:10,6:16:27.04:290,27,0	0/0:10,0:3:3.01:0,3,37	0/1:14,0:6:7.97:8,0,125	1/1:34,1:35:39.78:434,40,0	1/1:14,3:17:32.31:231,32,0	1/1:23,0:24:55.98:410,56,0	1/1:30,12:40:80.92:850,81,0	1/1:43,1:44:94.28:644,94,0	1/1:42,5:47:99:1426,120,0	1/1:30,2:32:42.24:273,42,0	1/1:47,0:47:99:809,109,0	1/1:43,4:47:89.78:683,90,0	1/1:34,3:37:60.20:474,60,0	1/1:48,3:52:82.62:648,83,0	1/1:41,2:43:91.43:694,91,0	1/1:12,1:13:32.82:314,33,0	1/1:7,1:8:24:232,24,0	1/1:5,8:13:27.07:339,27,0	1/1:9,25:34:72.01:700,72,0	1/1:18,11:28:10.85:138,11,0	1/1:28,4:32:58.30:443,58,0	1/1:29,1:30:49.32:406,49,0	1/1:19,1:20:9.88:136,10,0	1/1:27,5:32:56.22:578,56,0	1/1:38,4:42:99:1018,102,0	1/1:4,24:27:63.04:618,63,0	1/1:8,0:8:20.96:191,21,0
chr10	107337864	.	A	AT	16734.50	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.106;DP=672;FS=5.206;HRun=1;HaplotypeScore=378.0407;InbreedingCoeff=0.7330;MQ=33.98;MQ0=0;MQRankSum=-3.098;QD=25.79;ReadPosRankSum=4.450;VQSLOD=3.1023;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,5:10:20.42:230,20,0	1/1:6,0:9:27.03:282,27,0	0/0:9,0:3:2.92:0,3,17	0/0:13,0:6:2.05:0,2,43	1/1:1,20:24:41.93:392,42,0	1/1:3,11:15:33.02:387,33,0	1/1:2,19:23:57.05:662,57,0	1/1:14,0:28:78.23:931,78,0	1/1:3,32:39:95.81:1151,96,0	1/1:7,28:41:99:1395,112,0	1/1:2,23:25:44.69:530,45,0	1/1:4,37:44:99:1335,111,0	1/1:6,30:40:87.17:1046,87,0	1/1:3,28:32:63.11:739,63,0	1/1:8,29:41:83.65:906,84,0	1/1:2,30:37:93.17:1119,93,0	1/1:1,10:12:22.56:345,23,0	1/1:3,5:9:22.80:237,23,0	1/1:8,0:10:25.63:282,26,0	1/1:25,0:29:71.85:676,72,0	1/1:12,1:15:14.86:161,15,0	1/1:5,21:26:60.09:693,60,0	1/1:2,17:24:50.75:572,51,0	1/1:2,14:17:11.38:90,11,0	1/1:8,15:30:46.87:505,47,0	1/1:5,27:34:99:1167,99,0	1/1:24,0:26:63.13:677,63,0	1/1:0,7:7:20.88:225,21,0
chr10	107337872	.	T	TG	484.67	PASS	AB=0.886;AC=13;AF=0.232;AN=56;BaseQRankSum=12.562;DP=782;FS=19.551;HRun=0;HaplotypeScore=454.5370;InbreedingCoeff=0.3869;MQ=34.41;MQ0=4;MQRankSum=-1.864;QD=2.23;ReadPosRankSum=-6.288;VQSLOD=0.0791;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:16:7.93:0,8,172	1/1:3,5:9:18.69:59,19,0	0/0:15,0:5:9.03:0,9,122	0/0:14,0:6:5.09:0,5,108	0/1:25,1:26:56.96:57,0,123	0/0:20,0:20:18.51:0,19,334	0/0:26,0:26:33.53:0,34,598	0/1:20,10:32:99:107,0,99	0/0:41,0:41:75.56:0,76,981	0/0:50,0:49:99:0,123,1370	0/0:27,0:26:31.45:0,31,450	0/0:54,0:54:68.62:0,69,1162	0/0:42,1:43:55.43:0,55,876	0/0:41,0:41:46.84:0,47,802	0/0:45,0:45:36.06:0,36,758	0/0:40,0:40:39.23:0,39,765	0/0:15,0:15:14.17:0,14,207	0/0:11,0:11:9.31:0,9,238	1/1:3,7:10:5.42:92,5,0	1/1:3,24:29:41.13:130,41,0	0/1:10,9:21:17.27:17,0,36	0/0:33,0:33:20.76:0,21,575	0/0:29,0:29:6.69:0,7,383	0/1:25,0:25:12.80:13,0,50	0/1:36,0:37:33.81:34,0,439	0/0:37,0:37:99:0,107,1254	1/1:3,23:26:35.46:144,35,0	0/0:8,0:7:1.30:0,1,160
chr10	107337874	.	G	GTCT	3228.29	PASS	AB=0.596;AC=11;AF=0.196;AN=56;BaseQRankSum=4.805;DP=840;FS=0.344;HRun=0;HaplotypeScore=479.6773;InbreedingCoeff=0.8459;MQ=34.91;MQ0=4;MQRankSum=-2.458;QD=19.57;ReadPosRankSum=-1.897;VQSLOD=2.9351;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:24.80:0,25,298	1/1:8,5:13:14.85:244,15,0	0/0:19,0:6:14.69:0,15,171	0/0:13,0:7:14.53:0,15,182	0/0:26,1:27:43.94:0,44,375	0/0:20,0:20:59.63:0,60,717	0/0:26,0:26:70.41:0,70,923	1/1:38,9:44:99:1204,115,0	0/0:42,0:42:99:0,108,1504	0/0:52,0:51:94.95:0,95,1564	0/0:27,0:26:58.08:0,58,781	0/0:54,0:54:99:0,124,1822	0/0:44,0:44:97.28:0,97,1382	0/0:42,0:42:99:0,102,1326	0/0:46,0:46:99:0,123,1502	0/0:43,0:43:80.56:0,81,1178	0/0:17,0:17:17.91:0,18,339	0/0:11,0:11:24.58:0,25,356	1/1:6,7:13:24.51:401,25,0	0/1:11,23:34:9.85:607,0,10	1/1:17,9:26:5.76:193,6,0	0/0:36,0:36:72.98:0,73,1134	0/0:29,0:29:64.35:0,64,793	0/0:26,0:26:17.56:0,18,146	0/0:37,0:37:9.44:0,9,815	0/0:38,0:38:94.85:0,95,1445	1/1:9,23:31:60.99:751,61,0	0/0:8,0:7:20.85:0,21,236
chr10	107337887	.	TGA	T	416.81	PASS	AB=0.984;AC=8;AF=0.143;AN=56;BaseQRankSum=9.029;DP=967;FS=20.891;HRun=0;HaplotypeScore=484.0082;InbreedingCoeff=0.1418;MQ=37.97;MQ0=4;MQRankSum=-5.100;QD=1.86;ReadPosRankSum=0.307;VQSLOD=0.2764;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:29.05:0,29,506	0/1:14,0:14:43.91:44,0,60	0/1:30,0:12:0.89:1,0,283	0/0:18,0:12:11.56:0,12,240	0/0:35,0:35:48:0,48,610	0/0:24,0:24:63.15:0,63,1041	0/0:32,0:32:78.15:0,78,1266	0/1:52,6:55:99:143,0,390	0/0:43,0:43:99:0,117,2012	0/0:59,0:58:99:0,152,2492	0/0:29,0:28:60.17:0,60,1037	0/0:59,0:59:99:0,147,2507	0/0:46,0:46:99:0,102,1855	0/0:45,0:45:99:0,111,1856	0/0:55,0:55:99:0,141,2224	0/0:46,0:46:99:0,102,1622	0/0:21,0:21:44.50:0,45,587	0/0:15,0:15:21.65:0,22,527	0/1:15,0:15:49.53:50,0,103	1/1:34,0:34:15.69:161,16,0	0/1:35,0:35:9.32:9,0,124	0/0:44,0:44:99:0,108,1710	0/0:30,0:30:57.65:0,58,1006	0/0:28,0:28:11.69:0,12,220	0/0:38,0:38:66.42:0,66,1179	0/0:42,0:42:99:0,120,2081	0/1:38,0:37:99:143,0,154	0/0:12,0:10:26.99:0,27,348
chr10	107338303	.	GC	G	2528.75	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.860;DP=498;FS=1.978;HRun=7;HaplotypeScore=48.5715;InbreedingCoeff=0.9835;MQ=74.78;MQ0=0;MQRankSum=-1.311;QD=23.86;ReadPosRankSum=0.077;VQSLOD=3.5163;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,1395	1/1:1,3:4:9.02:92,9,0	0/0:14,1:14:35.96:0,36,396	0/0:8,0:7:21.06:0,21,247	0/0:16,0:16:39.12:0,39,491	0/0:21,0:21:60.18:0,60,741	0/0:24,0:24:63.20:0,63,792	1/1:4,17:21:48.10:490,48,0	0/0:17,0:17:51.16:0,51,641	0/0:13,0:13:36.05:0,36,433	0/0:9,0:9:21.04:0,21,229	0/0:22,0:22:66.20:0,66,815	0/0:11,0:11:30.09:0,30,367	0/0:13,0:13:39.06:0,39,457	0/0:21,0:21:57.18:0,57,717	0/0:21,0:21:60.18:0,60,742	0/0:36,0:36:99:0,99,1228	0/0:22,0:22:63.20:0,63,793	1/1:2,20:22:60.12:604,60,0	1/1:1,9:10:18.03:182,18,0	1/1:1,35:36:99:1009,99,0	0/0:9,0:9:27.08:0,27,328	0/0:13,0:13:39.11:0,39,476	0/0:22,0:22:63.20:0,63,793	0/0:13,0:13:39.12:0,39,480	0/0:18,0:18:42.13:0,42,517	1/1:1,12:13:33.07:337,33,0	0/0:8,0:8:21.06:0,21,253
chr10	107339706	.	TTA	T	1391.06	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=1.339;DP=420;FS=4.138;HRun=0;HaplotypeScore=95.0003;InbreedingCoeff=0.7882;MQ=65.14;MQ0=8;MQRankSum=-5.386;QD=16.37;ReadPosRankSum=-4.596;VQSLOD=2.4260;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:20.72:0,21,415	1/1:3,1:4:11.95:110,12,0	0/0:31,0:15:30.11:0,30,231	0/0:29,0:15:15.66:0,16,288	0/0:22,0:22:54.72:0,55,519	0/0:12,0:12:6.03:0,6,300	0/0:14,0:14:3.11:0,3,236	1/1:27,3:29:69.73:581,70,0	0/0:8,0:8:22.96:0,23,227	0/0:17,0:17:19.30:0,19,325	0/0:18,0:18:49.14:0,49,452	0/0:16,0:16:14.93:0,15,279	0/0:11,0:11:32.12:0,32,325	0/0:9,0:9:25.26:0,25,246	0/1:6,0:6:3.25:3,0,97	0/0:8,0:8:20.51:0,21,208	0/0:19,0:17:19.62:0,20,319	0/0:12,0:11:9.97:0,10,261	1/1:16,1:17:41.03:355,41,0	1/1:14,3:17:39.24:342,39,0	1/1:7,0:7:13.12:87,13,0	0/0:8,0:8:20.85:0,21,260	0/0:13,0:13:21.47:0,21,298	0/0:13,0:13:33.40:0,33,381	0/0:7,0:7:20.87:0,21,204	0/0:28,0:28:34.70:0,35,579	0/1:4,0:4:0.90:87,0,1	0/0:16,0:16:33.22:0,33,408
chr10	107339707	.	TA	T	1560.48	PASS	AB=0.963;AC=15;AF=0.268;AN=56;BaseQRankSum=2.632;DP=421;FS=7.244;HRun=1;HaplotypeScore=88.7040;InbreedingCoeff=0.6644;MQ=63.75;MQ0=8;MQRankSum=-6.759;QD=13.11;ReadPosRankSum=-4.481;VQSLOD=0.6879;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:9.77:0,10,256	1/1:3,1:4:11.98:117,12,0	0/0:31,0:14:29.06:0,29,203	0/0:29,0:15:6.68:0,7,207	0/0:22,0:22:53.41:0,53,408	0/0:13,0:13:4.81:0,5,216	0/0:15,0:15:4.25:0,4,179	1/1:27,3:29:74.46:641,74,0	0/0:8,0:8:11.50:0,12,134	0/0:17,1:18:18.81:0,19,277	0/0:18,0:18:36.58:0,37,334	0/1:15,1:16:12.31:12,0,158	0/0:11,0:11:25.85:0,26,217	0/0:9,0:9:5.20:0,5,147	0/1:6,0:6:3.41:3,0,77	0/0:8,0:8:20.38:0,20,167	0/1:17,1:16:2.95:3,0,197	0/0:12,0:11:9.89:0,10,204	1/1:13,3:16:47.67:387,48,0	1/1:16,1:17:49.20:360,49,0	1/1:5,2:7:12.82:99,13,0	0/0:8,0:8:20.84:0,21,211	0/0:14,0:14:21.02:0,21,234	0/0:13,0:13:29:0,29,278	0/0:7,0:7:16.22:0,16,129	0/0:28,0:28:38.83:0,39,485	1/1:3,2:5:12.01:119,12,0	0/0:15,0:15:14.65:0,15,288
chr10	107339708	.	AT	A	105.42	PASS	AB=0.912;AC=16;AF=0.286;AN=56;BaseQRankSum=1.987;DP=436;FS=2.766;HRun=16;HaplotypeScore=100.3853;InbreedingCoeff=-0.1058;MQ=62.59;MQ0=8;MQRankSum=-2.088;QD=0.44;ReadPosRankSum=1.082;VQSLOD=-0.2861;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,3:22:5.82:6,0,217	1/1:6,0:6:2.88:15,3,0	0/1:29,1:14:37.30:37,0,40	0/0:28,0:15:7:0,7,108	0/1:20,3:24:9.19:9,0,130	0/0:12,1:13:26.37:0,26,183	0/1:13,2:16:31.60:32,0,99	1/1:32,0:30:5.49:35,5,0	0/0:8,1:9:5.68:0,6,136	0/1:13,3:17:34.90:35,0,122	0/1:14,4:18:23.16:23,0,129	0/1:15,0:16:1.62:2,0,117	0/0:11,0:11:15.14:0,15,169	0/0:9,0:9:23.71:0,24,172	0/1:5,1:6:8.97:9,0,41	0/0:9,0:9:14.94:0,15,118	0/1:14,1:15:13.30:13,0,148	0/0:11,0:11:14.40:0,14,94	0/1:20,0:20:11.15:11,0,25	0/0:20,0:20:2.96:0,3,45	0/1:7,0:7:4.68:7,0,5	0/0:9,0:9:17.86:0,18,133	0/0:16,0:16:16.17:0,16,176	0/0:12,1:13:13.73:0,14,202	0/0:7,0:7:14.91:0,15,116	0/0:24,1:27:2.43:0,2,174	0/1:5,0:5:19.47:19,0,35	0/0:15,0:15:12.34:0,12,140
chr10	107339851	.	AT	A	2774.27	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=9.776;DP=433;FS=4.382;HRun=8;HaplotypeScore=48.1412;InbreedingCoeff=0.9692;MQ=76.80;MQ0=1;MQRankSum=-0.567;QD=23.51;ReadPosRankSum=-1.366;VQSLOD=3.7305;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.20:0,72,856	1/1:1,4:5:9.01:87,9,0	0/0:22,0:20:33.89:0,34,458	0/0:11,0:8:8.12:0,8,111	0/0:16,0:16:45.14:0,45,544	0/0:25,0:25:69.18:0,69,809	0/0:11,0:11:30.09:0,30,362	1/1:3,31:33:90.03:844,90,0	0/0:5,0:5:15.04:0,15,171	0/0:14,0:14:42.13:0,42,507	0/0:13,0:13:39.12:0,39,471	0/0:12,0:12:36.11:0,36,433	0/0:12,0:12:36.11:0,36,431	0/0:9,0:9:27.08:0,27,326	0/0:8,0:8:24.06:0,24,278	0/0:8,0:8:24.07:0,24,290	0/0:31,0:31:78.20:0,78,906	0/0:13,0:13:39.12:0,39,471	1/1:1,22:23:66.11:636,66,0	1/1:0,14:14:42.07:406,42,0	1/1:2,23:25:63.10:608,63,0	0/0:14,0:14:42.12:0,42,496	0/0:11,0:11:33.09:0,33,389	0/0:15,0:15:42.12:0,42,497	0/0:13,0:13:36.11:0,36,435	0/0:26,0:26:75.23:0,75,906	1/1:0,17:17:39.06:376,39,0	./.
chr10	107340942	.	T	TG	1698.55	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-5.264;DP=495;FS=4.874;HRun=8;HaplotypeScore=61.3980;InbreedingCoeff=0.9128;MQ=81.67;MQ0=4;MQRankSum=-0.195;QD=15.44;ReadPosRankSum=-1.837;VQSLOD=3.3212;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.01:0,60,543	0/0:4,0:4:12.01:0,12,110	0/0:41,0:29:17.82:0,18,255	0/1:28,0:23:1.95:2,0,107	0/0:15,0:15:42.02:0,42,384	0/0:14,0:14:30:0,30,274	0/0:24,0:24:54.86:0,55,513	1/1:8,11:19:30.02:310,30,0	0/0:14,0:14:37.96:0,38,322	0/0:12,0:12:30.01:0,30,274	0/0:20,0:20:47.99:0,48,432	0/0:9,0:9:20.38:0,20,173	0/0:9,0:9:24.01:0,24,219	0/0:24,0:24:66.92:0,67,606	0/0:23,0:23:46.90:0,47,447	0/0:17,0:17:41.03:0,41,360	0/0:26,0:26:62.65:0,63,548	0/0:19,0:19:47.97:0,48,431	1/1:3,8:11:24.06:267,24,0	1/1:2,20:22:57.17:657,57,0	1/1:2,11:13:30.09:346,30,0	0/0:10,0:10:26.99:0,27,238	0/0:9,0:9:18.01:0,18,164	0/0:23,0:23:49.24:0,49,442	0/0:17,0:17:47.94:0,48,429	0/0:24,0:24:60.03:0,60,548	1/1:2,14:17:26.91:291,27,0	0/0:6,0:6:15.01:0,15,137
chr10	107341690	.	T	TC	95.61	PASS	AB=0.879;AC=2;AF=0.036;AN=56;BaseQRankSum=-0.178;DP=466;FS=11.965;HRun=0;HaplotypeScore=69.8009;InbreedingCoeff=-0.0596;MQ=48.54;MQ0=24;MQRankSum=0.823;QD=2.17;ReadPosRankSum=-3.859;VQSLOD=-0.6492;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:38:99:0,101,813	0/0:5,0:5:11.46:0,11,79	0/1:22,0:6:14.88:15,0,29	0/0:13,0:3:5.73:0,6,35	0/0:18,0:17:36.65:0,37,325	0/0:12,0:12:23.78:0,24,185	0/0:19,0:16:26.71:0,27,217	0/0:26,3:28:14.90:0,15,245	0/0:16,0:16:21.14:0,21,125	0/0:18,0:17:44.86:0,45,404	0/0:13,0:13:28.65:0,29,222	0/0:6,0:6:8.88:0,9,58	0/0:10,0:9:20.01:0,20,189	0/0:11,0:9:26.17:0,26,196	0/0:16,0:15:42.43:0,42,347	0/0:7,0:6:11.57:0,12,92	0/0:35,0:30:67.49:0,67,572	0/0:21,0:17:41.78:0,42,360	0/1:15,7:21:99:166,0,181	0/0:10,1:10:0.25:0,0,78	0/0:4,1:5:5.46:0,5,36	0/0:11,0:11:23.63:0,24,154	0/0:19,0:19:53.59:0,54,425	0/0:18,0:16:32.83:0,33,286	0/0:15,0:14:32.72:0,33,273	0/0:23,0:21:54.16:0,54,458	0/0:18,0:17:26.69:0,27,208	0/0:13,0:9:23.88:0,24,198
chr10	107342516	.	A	AGG	5338.76	PASS	AB=0.831;AC=25;AF=0.481;AN=52;BaseQRankSum=14.006;DP=667;FS=26.129;HRun=2;HaplotypeScore=395.1467;InbreedingCoeff=-0.9256;MQ=32.29;MQ0=26;MQRankSum=-8.518;QD=8.20;ReadPosRankSum=1.034;VQSLOD=0.2183;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,2:21:46.26:46,0,502	0/1:7,3:10:72.85:209,0,73	./.	./.	0/1:29,10:39:99:287,0,254	0/1:19,3:23:99:100,0,515	0/1:32,2:32:19.88:20,0,762	0/1:39,1:24:99:153,0,374	0/1:17,8:25:99:308,0,273	0/1:34,5:37:99:203,0,682	0/1:24,7:30:99:202,0,267	0/1:25,1:24:71.75:72,0,471	0/1:19,7:25:99:307,0,356	0/1:20,4:22:99:137,0,412	0/1:25,4:28:99:156,0,500	0/1:14,8:20:99:284,0,206	0/1:17,3:19:78.65:79,0,518	0/1:4,1:5:40.88:41,0,50	0/1:23,1:15:99:206,0,113	0/1:18,9:26:99:314,0,242	0/0:16,0:16:20.01:0,20,304	0/1:20,10:29:99:325,0,381	0/1:23,12:35:99:493,0,282	0/1:15,2:15:24.58:25,0,267	0/1:15,12:24:99:436,0,193	0/1:21,12:30:99:505,0,157	0/1:14,4:18:99:128,0,138	0/1:17,6:23:99:304,0,332
chr10	107342517	.	GGAA	G	2985.78	PASS	AB=0.939;AC=26;AF=0.500;AN=52;BaseQRankSum=13.466;DP=668;FS=11.592;HRun=0;HaplotypeScore=304.8841;InbreedingCoeff=-0.6795;MQ=32.26;MQ0=27;MQRankSum=-8.320;QD=4.77;ReadPosRankSum=4.009;VQSLOD=0.9918;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,2:21:19.40:19,0,640	1/1:10,0:10:12.10:65,12,0	./.	./.	0/1:32,7:39:99:209,0,323	0/0:22,0:22:17.49:0,17,706	0/1:29,5:32:99:140,0,889	0/1:42,0:25:91.86:92,0,230	0/1:25,0:25:99:110,0,350	0/1:30,9:37:99:443,0,792	0/1:29,2:30:99:159,0,253	0/1:25,1:24:72.14:72,0,566	0/1:25,1:25:99:197,0,371	0/1:23,1:22:99:99,0,454	0/1:26,3:28:99:171,0,554	0/1:20,2:20:62.93:63,0,163	0/0:20,0:19:5.15:0,5,618	0/1:5,0:5:9.75:10,0,35	0/1:24,0:15:6.01:6,0,113	1/1:28,0:27:23.69:178,24,0	0/1:16,0:16:62.36:62,0,307	0/1:26,4:29:99:290,0,424	0/1:34,1:35:99:208,0,371	0/1:17,0:15:6.71:7,0,285	0/1:23,4:24:99:115,0,125	0/1:30,3:30:99:232,0,204	0/1:17,0:17:46.94:83,0,47	0/1:21,2:23:99:105,0,401
chr10	107342538	.	A	AG	3104.15	PASS	AB=0.854;AC=25;AF=0.446;AN=56;BaseQRankSum=15.214;DP=625;FS=8.433;HRun=1;HaplotypeScore=240.6437;InbreedingCoeff=-0.7997;MQ=35.26;MQ0=25;MQRankSum=-10.212;QD=5.24;ReadPosRankSum=-0.817;VQSLOD=-0.5748;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,2:22:38.91:39,0,510	0/1:9,2:11:53.08:53,0,170	0/0:5,0:2:3.01:0,3,32	0/0:7,0:4:9.02:0,9,99	0/1:23,8:31:99:250,0,449	0/1:21,2:23:26.64:27,0,606	0/1:32,2:32:2.07:2,0,868	0/1:29,1:15:40.32:40,0,269	0/1:19,5:24:99:148,0,427	0/1:33,4:37:90.54:91,0,923	0/1:23,6:28:99:116,0,371	0/1:19,2:19:30.52:31,0,496	0/1:17,6:22:99:232,0,446	0/1:19,2:19:54.16:54,0,374	0/1:23,4:25:99:118,0,486	0/1:17,5:20:99:162,0,450	0/1:17,3:19:27.60:28,0,515	0/1:4,1:5:33.04:33,0,80	0/1:14,1:10:12.74:13,0,222	0/1:17,6:22:99:225,0,296	0/0:21,0:21:47.94:0,48,509	0/1:21,10:30:99:313,0,405	0/1:15,11:26:99:327,0,312	0/1:16,2:16:8.56:9,0,386	0/1:18,8:23:99:304,0,233	0/1:25,7:29:99:385,0,353	0/1:11,2:13:57.28:57,0,173	0/1:20,5:24:99:200,0,393
chr10	107342658	.	G	GGTTTTGTTTT	4001.75	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-3.704;DP=477;FS=8.732;HRun=0;HaplotypeScore=135.8573;InbreedingCoeff=0.9320;MQ=58.13;MQ0=3;MQRankSum=-3.810;QD=53.36;ReadPosRankSum=-3.793;VQSLOD=2.1458;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:59.84:0,60,1611	1/1:3,1:4:6.01:176,6,0	0/0:16,0:10:5.98:0,6,71	0/0:18,0:14:21.06:0,21,430	0/0:23,0:23:45.10:0,45,914	0/0:21,0:21:45.15:0,45,1207	0/0:20,0:20:48.15:0,48,1209	1/1:26,0:26:51.64:1468,52,0	0/0:15,0:15:36.12:0,36,1005	0/0:22,0:22:42.14:0,42,906	0/0:12,0:12:24.08:0,24,567	0/0:20,0:20:51.16:0,51,1259	0/0:14,0:14:39.13:0,39,1025	0/0:14,0:14:36.12:0,36,841	0/0:19,0:19:45.15:0,45,1105	0/0:11,0:9:21.06:0,21,552	0/0:39,0:39:99:0,102,2901	0/0:12,0:12:18.05:0,18,449	1/1:9,7:15:27.07:954,27,0	1/1:9,1:10:18.06:525,18,0	1/1:6,2:8:12:405,12,0	0/0:9,0:9:12.04:0,12,325	0/0:12,0:11:15.05:0,15,369	0/0:19,0:19:33.11:0,33,925	0/0:17,0:17:42.14:0,42,1228	0/0:26,0:26:54.17:0,54,1434	1/1:8,2:9:15.05:474,15,0	0/0:15,0:15:21.07:0,21,557
chr10	107342708	.	A	AC	1043.89	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-1.720;DP=455;FS=0.632;HRun=9;HaplotypeScore=62.6896;InbreedingCoeff=0.9054;MQ=69.24;MQ0=0;MQRankSum=-0.941;QD=16.31;ReadPosRankSum=-2.365;VQSLOD=3.2673;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:58.94:0,59,492	0/0:6,0:6:17.96:0,18,149	0/0:22,0:21:10.95:0,11,225	0/0:20,0:18:10.57:0,11,198	0/0:20,0:21:32.99:0,33,286	0/0:17,0:17:44.98:0,45,386	0/0:17,0:18:40.97:0,41,336	1/1:6,12:17:30.08:330,30,0	0/0:17,0:18:46.98:0,47,386	0/0:19,0:19:38.98:0,39,337	0/0:10,0:10:24:0,24,208	0/0:15,0:15:32.97:0,33,286	0/0:11,0:11:23.98:0,24,208	0/0:9,0:9:20.98:0,21,182	0/0:17,0:17:44.99:0,45,390	0/0:10,0:9:23.99:0,24,208	0/0:41,0:43:99:0,104,886	0/0:13,1:15:35:0,35,286	1/1:7,2:9:11.06:140,11,0	1/1:4,6:10:18.05:199,18,0	1/1:4,10:14:1.04:239,1,0	0/0:14,0:15:41.03:0,41,344	0/0:5,0:5:15:0,15,130	0/0:20,0:20:50.98:0,51,442	0/0:14,0:14:24.86:0,25,207	0/0:16,0:16:32.97:0,33,286	1/1:2,10:12:27.07:298,27,0	0/0:20,0:20:47.93:0,48,407
chr10	107342814	.	CTT	C	1068.41	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.987;DP=530;FS=12.942;HRun=12;HaplotypeScore=66.7074;InbreedingCoeff=0.8995;MQ=57.92;MQ0=14;MQRankSum=-0.201;QD=13.52;ReadPosRankSum=2.485;VQSLOD=0.8163;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:39:76.38:0,76,975	0/0:2,0:6:4.99:0,5,18	0/0:15,0:5:2.80:0,3,13	0/0:15,0:8:10.06:0,10,84	0/0:18,0:18:41.93:0,42,549	0/0:18,0:18:42.11:0,42,593	0/0:26,0:28:71.66:0,72,961	1/1:10,9:18:7.10:217,7,0	0/0:15,0:17:44.61:0,45,580	0/0:19,0:19:36.93:0,37,530	0/0:18,0:16:33.07:0,33,448	0/0:19,0:19:42.14:0,42,601	0/0:15,0:16:41.63:0,42,586	0/0:15,0:16:41.31:0,41,487	0/0:15,0:16:47.55:0,48,599	0/0:12,0:12:36.12:0,36,531	0/0:39,0:41:99:0,105,1382	0/0:25,0:24:61.92:0,62,793	1/1:2,11:13:33.02:323,33,0	1/1:1,8:8:20.05:179,20,0	1/1:4,16:20:24.03:244,24,0	0/0:11,0:11:33.05:0,33,415	0/0:9,0:8:18.06:0,18,260	0/0:29,0:30:71.87:0,72,939	0/0:11,0:11:23.24:0,23,258	0/0:23,0:23:56.61:0,57,707	1/1:3,15:17:26.84:274,27,0	0/0:27,0:27:60.07:0,60,786
chr10	107345079	.	A	AGTGT	3201.73	PASS	AB=0.806;AC=14;AF=0.250;AN=56;BaseQRankSum=7.004;DP=777;FS=4.162;HRun=0;HaplotypeScore=134.6187;InbreedingCoeff=0.5775;MQ=66.57;MQ0=9;MQRankSum=0.625;QD=10.26;ReadPosRankSum=-2.083;VQSLOD=2.7597;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:87.17:0,87,1293	1/1:5,0:14:20.84:340,21,0	0/0:34,0:19:5.47:0,5,62	0/1:51,0:25:8.39:8,0,50	0/0:17,0:17:33.11:0,33,532	0/0:21,0:22:56.42:0,56,775	0/0:22,0:23:50.89:0,51,694	1/1:18,0:16:6.57:268,7,0	0/0:26,0:27:43:0,43,650	0/0:32,0:33:63.15:0,63,927	0/0:12,0:12:30.10:0,30,488	0/1:11,0:24:65.31:65,0,286	0/0:17,0:18:39.11:0,39,589	0/0:20,0:23:48.09:0,48,698	0/0:23,0:25:57.14:0,57,852	0/0:29,0:29:75.12:0,75,1136	0/0:36,0:43:65.80:0,66,1189	0/0:27,0:27:51.69:0,52,841	1/1:16,7:23:26.37:402,26,0	1/1:5,1:11:8.77:158,9,0	0/1:34,49:93:13.93:1533,0,14	0/0:13,0:15:14.45:0,14,308	0/0:16,0:16:36.12:0,36,583	0/1:43,2:49:16.26:16,0,1757	0/0:18,0:18:36.01:0,36,506	0/0:28,0:30:51.10:0,51,736	1/1:7,16:27:32.07:589,32,0	0/0:11,0:11:15.05:0,15,244
chr10	107347725	.	C	CGGGACACG	4723.32	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-2.937;DP=479;FS=2.833;HRun=0;HaplotypeScore=124.0108;InbreedingCoeff=0.9777;MQ=80.97;MQ0=0;MQRankSum=-7.245;QD=43.33;ReadPosRankSum=-5.680;VQSLOD=3.5523;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.23:0,69,1719	0/0:6,0:6:15.05:0,15,401	0/0:11,0:11:15.04:0,15,297	0/0:17,0:17:29.96:0,30,844	0/0:14,0:14:30.10:0,30,749	0/0:15,0:15:36.12:0,36,935	0/0:30,0:30:78.27:0,78,2080	1/1:18,2:22:24.05:767,24,0	0/0:23,0:23:54.19:0,54,1428	0/0:5,0:5:12.04:0,12,321	0/0:7,0:7:18.05:0,18,425	0/0:13,0:13:30.10:0,30,801	0/0:10,0:10:27.09:0,27,718	0/0:26,0:26:72.25:0,72,1922	0/0:9,0:9:24.08:0,24,639	0/0:8,0:8:24.08:0,24,641	0/0:36,0:36:87.27:0,87,2256	0/0:26,0:26:60.21:0,60,1586	1/1:18,4:25:27.03:709,27,0	1/1:3,5:10:18.06:753,18,0	1/1:19,10:35:26.42:1098,26,0	0/0:12,0:12:30.09:0,30,746	0/0:8,0:8:21.07:0,21,561	0/0:32,0:32:84.29:0,84,2243	0/0:12,0:11:33.10:0,33,736	0/0:16,0:16:45.14:0,45,1129	1/1:6,11:17:33.11:1396,33,0	0/0:8,0:8:24.08:0,24,640
chr10	107347752	.	TGCCACGGGACGG	T	1045.71	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.570;DP=499;FS=0.000;HRun=0;HaplotypeScore=174.5231;InbreedingCoeff=0.9633;MQ=77.30;MQ0=0;MQRankSum=-5.127;QD=74.69;ReadPosRankSum=2.579;VQSLOD=3.0631;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.31:0,93,5442	0/0:5,0:5:12.04:0,12,626	0/0:9,0:9:21.07:0,21,1093	0/0:15,0:15:39.12:0,39,1825	0/0:10,0:10:30.10:0,30,1762	0/0:16,0:16:48.16:0,48,2979	0/0:35,0:35:99:0,99,5854	0/0:26,0:26:69.22:0,69,3729	0/0:16,0:16:45.15:0,45,2581	0/0:13,0:13:39.13:0,39,2273	0/0:10,0:10:30.09:0,30,1676	1/1:2,12:14:30.10:1140,30,0	0/0:12,0:12:36.12:0,36,2041	0/0:28,0:28:78.27:0,78,4328	0/0:13,0:13:39.13:0,39,2300	0/0:13,0:13:39.13:0,39,2419	0/0:33,0:33:93.32:0,93,5474	0/0:27,0:27:78.27:0,78,4415	0/0:27,0:27:78.24:0,78,3775	0/0:12,0:12:33.11:0,33,2019	0/0:33,0:33:60.68:0,61,3547	0/0:10,0:10:30.09:0,30,1508	0/0:11,0:11:33.11:0,33,1945	0/0:25,0:25:75.26:0,75,4348	0/0:12,0:11:36.12:0,36,2128	0/0:17,0:17:48.16:0,48,2609	0/0:14,0:14:36.12:0,36,2125	0/0:11,0:11:33.11:0,33,1941
chr10	107348068	.	A	ATC	474.25	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=3.095;DP=714;FS=8.487;HRun=0;HaplotypeScore=110.3464;InbreedingCoeff=0.4496;MQ=87.64;MQ0=5;MQRankSum=1.569;QD=5.21;ReadPosRankSum=-2.108;VQSLOD=1.4330;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:50:99:0,141,1683	0/0:9,0:9:24.08:0,24,295	0/1:74,0:45:5.52:6,0,441	0/0:88,0:66:24.33:0,24,899	0/0:19,0:19:42.13:0,42,516	0/0:14,0:15:32.93:0,33,383	0/0:26,0:26:60.19:0,60,738	0/0:25,0:27:35.93:0,36,410	0/0:24,0:24:60.17:0,60,724	0/0:20,0:20:45.14:0,45,554	0/0:13,0:14:32.94:0,33,383	1/1:4,12:16:2.20:550,2,0	0/0:19,0:19:48.12:0,48,574	0/0:24,0:24:66.19:0,66,799	0/0:20,0:20:51.16:0,51,628	0/0:22,0:22:54.17:0,54,665	0/0:39,0:40:90.11:0,90,1083	0/0:24,0:24:57.10:0,57,685	0/0:16,0:16:36.11:0,36,443	0/0:16,0:16:39.10:0,39,456	0/0:30,0:30:78.06:0,78,924	0/0:11,0:12:29.93:0,30,346	0/0:11,0:11:30.08:0,30,356	0/0:34,0:34:93.29:0,93,1145	0/0:9,0:9:21.07:0,21,259	0/0:24,0:24:63.19:0,63,765	0/0:21,0:21:51.16:0,51,628	0/0:6,0:6:6.02:0,6,74
chr10	107348514	.	CA	C	5166.47	PASS	AB=0.964;AC=50;AF=0.893;AN=56;BaseQRankSum=4.186;DP=546;FS=0.000;HRun=1;HaplotypeScore=103.3178;InbreedingCoeff=-0.1086;MQ=81.54;MQ0=0;MQRankSum=-1.486;QD=9.46;ReadPosRankSum=7.496;VQSLOD=2.0569;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:40:59.40:407,59,0	1/1:7,1:8:17.03:74,17,0	0/1:17,0:17:31.91:32,0,44	0/1:14,3:16:38.12:38,0,94	1/1:12,0:12:33:152,33,0	0/1:19,0:19:1.31:113,0,1	1/1:23,0:23:56.54:236,57,0	1/1:18,0:18:45:172,45,0	1/1:16,0:16:18.95:153,19,0	1/1:19,0:19:46.95:177,47,0	1/1:13,1:14:17.68:143,18,0	1/1:31,0:31:59.14:322,59,0	1/1:17,0:17:46.18:204,46,0	1/1:15,0:15:13.41:130,13,0	1/1:16,1:17:46:219,46,0	1/1:18,0:18:18.10:139,18,0	1/1:33,0:33:40.89:297,41,0	1/1:17,0:17:22.43:148,22,0	0/1:16,0:16:40.14:91,0,40	1/1:15,0:15:17.03:171,17,0	1/1:50,0:50:99:551,110,0	0/1:13,1:14:13.09:138,0,13	1/1:20,0:20:43.96:200,44,0	1/1:21,0:21:57.01:243,57,0	1/1:15,1:16:38.16:186,38,0	1/1:17,0:17:42.12:161,42,0	0/1:17,0:17:7.05:130,0,7	1/1:8,1:9:25.16:141,25,0
chr10	107350370	.	TTGTG	T	1198.89	PASS	AB=0.878;AC=12;AF=0.222;AN=54;BaseQRankSum=4.234;DP=714;FS=0.664;HRun=0;HaplotypeScore=132.7550;InbreedingCoeff=0.3437;MQ=64.38;MQ0=11;MQRankSum=-2.922;QD=5.40;ReadPosRankSum=-0.067;VQSLOD=2.6261;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:43:51.25:0,51,942	0/0:4,0:6:5.49:0,5,25	0/0:20,0:14:0:0,0,0	./.	0/0:21,0:23:38.59:0,39,686	0/0:34,0:33:52.42:0,52,1091	0/0:22,0:25:30.17:0,30,443	0/1:28,0:27:30.19:40,0,30	0/0:26,0:27:37.27:0,37,958	0/0:28,0:27:27.02:0,27,411	0/1:18,1:19:14.31:14,0,559	1/1:6,0:25:23.56:223,24,0	0/0:20,0:21:41.78:0,42,805	0/0:34,0:35:44.54:0,45,863	0/0:30,0:30:53.24:0,53,1050	0/0:25,0:30:53.37:0,53,1033	0/0:29,0:30:50.86:0,51,1082	0/0:24,0:24:40.07:0,40,797	0/1:14,2:16:62.15:85,0,62	1/1:12,8:19:15.05:232,15,0	1/1:25,24:49:33.11:511,33,0	0/0:22,0:22:31.80:0,32,391	0/0:16,0:16:18.04:0,18,329	0/0:34,0:34:51.13:0,51,1105	0/1:15,4:21:99:141,0,456	0/1:26,0:27:31.75:32,0,502	0/1:10,5:15:15.34:83,0,15	0/0:15,0:16:31.66:0,32,664
chr10	107352396	.	GCA	G	238.16	PASS	AB=0.898;AC=16;AF=0.348;AN=46;BaseQRankSum=6.072;DP=558;FS=0.928;HRun=0;HaplotypeScore=92.7196;InbreedingCoeff=0.2110;MQ=71.83;MQ0=8;MQRankSum=-3.279;QD=1.31;ReadPosRankSum=2.215;VQSLOD=1.6936;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:12.01:0,12,137	1/1:9,0:9:2.84:14,3,0	./.	./.	0/1:14,2:16:26.07:26,0,36	0/0:16,0:17:21:0,21,242	0/0:23,0:29:6.01:0,6,68	./.	0/1:13,1:14:34.15:34,0,74	0/0:16,0:16:3:0,3,27	0/0:10,0:10:6:0,6,66	1/1:18,0:18:5.55:28,6,0	0/1:13,1:14:17.02:17,0,156	0/1:14,4:18:49.12:49,0,97	./.	0/0:17,0:17:15.03:0,15,199	0/0:19,0:19:18.95:0,19,260	0/0:17,0:17:15.05:0,15,218	1/1:17,0:17:11.36:56,11,0	1/1:15,0:14:2.84:14,3,0	./.	0/0:14,0:14:12.01:0,12,134	0/0:16,0:16:8.39:0,8,93	0/1:24,1:25:23.04:23,0,79	0/1:17,2:19:23.08:23,0,57	0/0:24,0:24:9:0,9,89	1/1:16,0:15:22.38:106,22,0	0/0:4,0:3:6.01:0,6,70
chr10	107352423	.	CACACACACACACACACACACACAT	C	2634.30	PASS	AB=0.898;AC=6;AF=0.107;AN=56;BaseQRankSum=8.377;DP=633;FS=4.902;HRun=0;HaplotypeScore=290.8233;InbreedingCoeff=0.3409;MQ=52.33;MQ0=14;MQRankSum=-1.428;QD=18.42;ReadPosRankSum=-1.198;VQSLOD=1.7783;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:41:85.56:0,86,5710	0/0:10,0:10:15.18:0,15,852	0/0:18,0:7:15.05:0,15,381	0/0:27,0:14:32.27:0,32,854	0/0:14,0:14:30.54:0,31,1929	0/0:14,0:13:31.07:0,31,2388	0/0:34,0:34:52.54:0,53,3420	0/1:23,0:22:99:280,0,132	0/0:14,0:13:39.12:0,39,2926	0/0:17,0:17:48.16:0,48,2645	0/0:15,0:15:39.06:0,39,2059	0/0:30,0:29:31.52:0,32,1554	0/0:12,0:12:27.07:0,27,2050	0/0:22,0:22:60.16:0,60,4106	0/0:23,0:22:54.14:0,54,3362	0/0:18,0:18:45.61:0,46,3259	0/0:25,0:25:66.23:0,66,5807	0/0:25,0:25:69.20:0,69,4945	0/1:5,11:16:23.01:817,0,23	0/1:24,0:24:3.18:341,0,3	0/1:59,0:57:13.98:14,0,133	0/0:14,0:13:30.10:0,30,2663	0/0:17,0:17:42.03:0,42,3062	0/0:29,0:29:69.16:0,69,4338	0/0:24,0:24:60.63:0,61,3750	0/0:38,0:38:99:0,114,6933	1/1:21,0:21:29.56:1312,30,0	0/0:7,0:6:15.05:0,15,1248
chr10	107352425	.	CACACACACACACACACACACAT	C	3197.68	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=8.876;DP=623;FS=10.701;HRun=0;HaplotypeScore=263.0800;InbreedingCoeff=0.8420;MQ=52.76;MQ0=14;MQRankSum=-1.771;QD=41.00;ReadPosRankSum=-2.102;VQSLOD=1.1253;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:40:82.98:0,83,5074	0/0:10,0:10:15.19:0,15,748	0/0:20,0:8:18.03:0,18,303	0/0:27,0:14:25.41:0,25,640	0/0:14,0:14:30.54:0,31,1760	0/0:14,0:13:31.28:0,31,2135	0/0:33,0:33:48.79:0,49,2965	0/1:22,0:22:0.15:334,0,0	0/0:14,0:13:39.11:0,39,2617	0/0:17,0:17:48.15:0,48,2250	0/0:17,0:17:45.04:0,45,1874	0/0:31,0:30:31.52:0,32,1321	0/0:12,0:12:27.06:0,27,1893	0/0:23,0:23:63.13:0,63,3651	0/0:22,0:21:51.13:0,51,2946	0/0:19,0:19:48.59:0,49,2943	0/0:25,0:25:66.23:0,66,5269	0/0:23,0:23:66.18:0,66,4379	1/1:12,2:14:16.84:849,17,0	1/1:0,21:21:9.03:469,9,0	0/0:6,47:51:3.01:0,3,104	0/0:15,0:14:33.10:0,33,2439	0/0:17,0:17:41.80:0,42,2678	0/0:29,0:29:69.14:0,69,3821	0/0:23,0:23:57.62:0,58,3280	0/0:38,0:38:99:0,114,6035	1/1:1,20:21:29.80:1687,30,0	0/0:7,0:6:15.05:0,15,1110
chr10	107352441	.	CACACAT	C	1349.09	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=9.865;DP=605;FS=3.287;HRun=0;HaplotypeScore=123.9990;InbreedingCoeff=0.7567;MQ=63.70;MQ0=9;MQRankSum=-0.346;QD=7.84;ReadPosRankSum=1.774;VQSLOD=2.0133;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:92.92:0,93,1261	0/1:8,0:8:13.82:25,0,14	0/0:23,0:15:45.10:0,45,500	0/0:27,0:19:36.69:0,37,472	0/0:16,0:16:38.71:0,39,471	0/0:14,0:13:32.69:0,33,660	0/0:30,0:30:52.29:0,52,638	1/1:22,0:23:48.28:440,48,0	0/1:15,0:14:3.42:3,0,523	0/0:19,0:19:50.95:0,51,505	0/0:13,0:13:35.97:0,36,361	1/1:1,21:21:5.38:144,5,0	0/0:14,0:14:37.58:0,38,668	0/0:21,0:21:56.85:0,57,796	0/0:19,0:18:44.99:0,45,515	0/0:21,0:21:47.70:0,48,754	0/0:25,0:25:68.01:0,68,1330	0/0:22,0:22:62.60:0,63,989	1/1:13,0:13:35.76:384,36,0	1/1:21,0:21:8.28:74,8,0	0/1:48,0:47:0:0,0,0	0/0:15,0:14:36.03:0,36,572	0/0:15,0:15:35.92:0,36,575	0/0:28,0:28:68.97:0,69,943	0/0:24,0:24:58.43:0,58,701	0/0:35,0:35:99:0,105,1168	1/1:22,0:21:29.32:447,29,0	0/0:9,0:8:20.60:0,21,319
chr10	107352443	.	CACAT	C	1111.21	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=9.832;DP=592;FS=7.496;HRun=0;HaplotypeScore=104.7648;InbreedingCoeff=0.9040;MQ=64.75;MQ0=9;MQRankSum=-0.239;QD=10.29;ReadPosRankSum=1.523;VQSLOD=2.4003;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:86.84:0,87,960	1/1:0,7:7:2.96:61,3,0	0/0:24,0:16:48.10:0,48,528	0/0:27,0:19:36.36:0,36,472	0/0:16,0:16:35.45:0,35,364	0/0:14,0:13:32.63:0,33,439	0/0:29,0:29:48.81:0,49,502	1/1:22,0:23:48.28:440,48,0	0/0:13,0:12:22.64:0,23,360	0/0:18,0:18:47.98:0,48,434	0/0:12,0:12:32.95:0,33,271	1/1:22,0:21:5.78:80,6,0	0/0:13,0:13:33.49:0,33,495	0/0:21,0:21:56.82:0,57,645	0/0:19,0:18:41.97:0,42,418	0/0:22,0:22:50.54:0,51,627	0/0:24,0:24:65.95:0,66,1009	0/0:21,0:21:59.52:0,60,742	1/1:13,0:13:35.76:328,36,0	1/1:21,0:21:3.95:43,4,0	./.	0/0:14,0:13:32.99:0,33,392	0/0:16,0:16:38.92:0,39,490	0/0:27,0:27:65.94:0,66,765	0/0:23,0:23:54.87:0,55,569	0/0:33,0:33:91.19:0,91,872	1/1:22,0:21:27.11:327,27,0	0/0:9,0:8:20.58:0,21,231
chr10	107352445	.	CAT	C	868.48	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=10.428;DP=579;FS=5.962;HRun=0;HaplotypeScore=85.6378;InbreedingCoeff=0.8970;MQ=66.11;MQ0=9;MQRankSum=0.343;QD=8.04;ReadPosRankSum=0.858;VQSLOD=2.9017;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:99:0,99,884	1/1:7,0:7:2.96:29,3,0	0/0:24,0:16:48.10:0,48,528	0/0:28,0:20:39.56:0,40,494	0/0:15,0:15:30.03:0,30,305	0/0:14,0:13:29.90:0,30,306	0/0:29,0:29:54.71:0,55,473	1/1:1,22:23:48.28:440,48,0	0/0:14,0:13:28.61:0,29,301	0/0:16,0:16:41.97:0,42,378	0/0:12,0:12:29.95:0,30,246	1/1:22,0:21:5.51:52,6,0	0/0:13,0:13:19.70:0,20,377	0/0:20,0:20:35.06:0,35,404	0/0:19,0:18:44.93:0,45,371	0/0:21,0:21:47.58:0,48,500	0/0:21,0:21:55.73:0,56,604	0/0:19,0:19:50.54:0,51,535	1/1:13,0:13:35.71:272,36,0	1/1:21,0:21:3:26,3,0	./.	0/0:13,0:12:26.98:0,27,258	0/0:14,0:14:35.90:0,36,371	0/0:27,0:27:64.01:0,64,620	0/0:21,0:21:41.35:0,41,400	0/0:29,0:29:77.88:0,78,674	1/1:22,0:21:26.72:215,27,0	0/0:12,0:11:29.42:0,29,251
chr10	107353509	.	CTGTGAG	C	2011.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.160;DP=1125;FS=3.106;HRun=0;HaplotypeScore=239.8591;InbreedingCoeff=0.9994;MQ=64.19;MQ0=6;MQRankSum=-8.493;QD=37.96;ReadPosRankSum=-0.222;VQSLOD=3.3421;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,144,4522	0/0:14,0:14:39.13:0,39,1297	0/0:58,0:38:93.13:0,93,2589	0/0:78,0:50:99:0,107,2667	0/0:33,0:33:87.28:0,87,2892	0/0:19,0:19:54.17:0,54,1757	0/0:38,0:38:99:0,108,3617	0/0:49,0:49:99:0,114,3050	0/0:37,0:37:99:0,111,3675	0/0:53,0:53:99:0,138,4599	0/0:18,0:18:51.18:0,51,1698	1/1:6,46:53:58.21:2107,58,0	0/0:39,0:39:99:0,111,3595	0/0:37,0:37:99:0,102,3290	0/0:60,0:60:99:0,162,5279	0/0:46,0:46:99:0,132,4338	0/0:42,0:42:99:0,112,3746	0/0:44,0:43:99:0,116,3680	0/0:29,0:29:63.18:0,63,1907	0/0:36,0:36:99:0,99,3255	0/0:71,0:70:99:0,183,5716	0/0:31,0:31:84.27:0,84,2771	0/0:32,0:32:84.23:0,84,2568	0/0:42,0:42:99:0,114,3801	0/0:23,0:23:59.90:0,60,1894	0/0:41,0:41:99:0,114,3682	0/0:35,0:35:92.97:0,93,3059	0/0:11,0:11:30.10:0,30,1056
chr10	107354521	.	A	ACACACACG	1564.09	PASS	AB=0.870;AC=11;AF=0.196;AN=56;BaseQRankSum=-3.993;DP=641;FS=2.157;HRun=0;HaplotypeScore=154.3892;InbreedingCoeff=0.6051;MQ=54.14;MQ0=15;MQRankSum=-0.439;QD=10.94;ReadPosRankSum=-2.000;VQSLOD=2.4988;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:81.11:0,81,1467	0/1:13,0:13:48.12:136,0,48	0/0:30,0:7:14.80:0,15,101	0/0:28,0:6:14.92:0,15,134	0/0:27,0:27:33.16:0,33,628	0/0:29,0:28:51.07:0,51,890	0/0:36,0:36:78.10:0,78,1280	1/1:26,0:26:10.94:333,11,0	0/0:17,0:17:30.01:0,30,565	0/0:27,0:27:60.01:0,60,913	0/0:12,0:12:27.08:0,27,562	0/1:19,0:19:49.45:314,0,49	0/0:8,0:8:18.01:0,18,251	0/0:17,0:17:38.97:0,39,633	0/0:11,0:11:27.04:0,27,461	0/0:12,0:12:24.04:0,24,382	0/0:34,0:33:84.14:0,84,1609	0/0:21,0:21:38.76:0,39,807	1/1:8,7:18:32.71:381,33,0	1/1:15,0:16:9.50:197,10,0	0/1:14,0:38:14.29:115,0,14	0/0:26,0:26:57.04:0,57,999	0/0:19,0:19:44.79:0,45,946	0/0:20,0:20:36.11:0,36,827	0/0:25,0:25:30.05:0,30,467	0/0:22,0:22:30.03:0,30,380	1/1:3,6:10:6.02:250,6,0	0/0:28,0:28:45.14:0,45,1099
chr10	107354559	.	A	AT	712.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.660;DP=554;FS=8.104;HRun=1;HaplotypeScore=64.7896;InbreedingCoeff=0.9779;MQ=77.49;MQ0=3;MQRankSum=-3.047;QD=37.50;ReadPosRankSum=0.074;VQSLOD=3.7870;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.28:0,93,1189	0/0:14,0:14:33.03:0,33,428	0/0:23,0:22:56.88:0,57,647	0/0:20,0:17:45.13:0,45,546	0/0:21,0:21:60.17:0,60,751	0/0:27,0:27:81.21:0,81,1005	0/0:34,0:34:90.24:0,90,1124	0/0:18,0:18:54.16:0,54,677	0/0:14,0:14:39.13:0,39,506	0/0:16,0:16:48.15:0,48,611	0/0:9,0:9:27.09:0,27,351	1/1:1,18:19:54.18:807,54,0	0/0:9,0:9:27.06:0,27,332	0/0:17,0:17:48.16:0,48,622	0/0:10,0:10:24.08:0,24,312	0/0:9,0:9:24.08:0,24,312	0/0:36,0:35:99:0,105,1300	0/0:22,0:22:66.14:0,66,817	0/0:24,0:24:63.19:0,63,805	0/0:5,0:5:15.05:0,15,195	0/0:48,0:47:63.20:0,63,816	0/0:24,0:24:63.15:0,63,763	0/0:13,0:13:33.11:0,33,428	0/0:25,0:25:72.21:0,72,917	0/0:12,0:12:36.12:0,36,467	0/0:17,0:17:45.14:0,45,572	0/0:18,0:18:42.12:0,42,530	0/0:18,0:18:51.17:0,51,662
chr10	107355997	.	C	CCAGAG	1586.71	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.426;DP=550;FS=1.967;HRun=0;HaplotypeScore=103.5783;InbreedingCoeff=0.9876;MQ=74.87;MQ0=0;MQRankSum=-4.437;QD=79.34;ReadPosRankSum=0.474;VQSLOD=5.6673;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.31:0,90,2007	0/0:9,0:9:27.08:0,27,559	0/0:7,0:7:17.95:0,18,350	0/0:13,0:13:36.08:0,36,690	0/0:16,0:16:48.16:0,48,1070	0/0:28,0:28:81.28:0,81,1790	0/0:22,0:22:66.21:0,66,1430	0/0:32,0:32:93.30:0,93,1975	0/0:17,0:17:51.18:0,51,1136	0/0:24,0:24:63.21:0,63,1366	0/0:20,0:19:54.17:0,54,1142	1/1:5,14:20:54.18:1682,54,0	0/0:16,0:16:48.15:0,48,1027	0/0:17,0:17:51.17:0,51,1095	0/0:22,0:22:60.21:0,60,1293	0/0:8,0:8:24.08:0,24,535	0/0:33,0:33:96.28:0,96,2031	0/0:32,0:32:93.24:0,93,1900	0/0:15,0:15:39.13:0,39,868	0/0:18,0:18:54.19:0,54,1179	0/0:28,0:28:81.24:0,81,1701	0/0:11,0:11:30.09:0,30,610	0/0:15,0:15:45.15:0,45,1000	0/0:24,0:24:72.21:0,72,1496	0/0:14,0:14:39.12:0,39,812	0/0:30,0:30:84.28:0,84,1803	0/0:19,0:19:57.18:0,57,1229	0/0:10,0:10:30.10:0,30,669
chr10	107358986	.	TTG	T	1050.39	PASS	AB=0.930;AC=24;AF=0.462;AN=52;BaseQRankSum=7.049;DP=743;FS=14.212;HRun=0;HaplotypeScore=133.3561;InbreedingCoeff=-0.1048;MQ=60.54;MQ0=22;MQRankSum=-3.098;QD=2.35;ReadPosRankSum=-0.241;VQSLOD=1.9252;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:39:99:224,0,290	1/1:8,0:8:5.78:32,6,0	./.	0/0:40,0:25:0:0,0,0	0/0:12,0:14:18.03:0,18,226	0/1:32,0:33:56.66:57,0,470	0/1:18,2:20:17.56:18,0,163	0/0:30,0:26:1.78:0,2,5	0/1:30,2:32:90.21:90,0,477	1/1:16,0:19:5.68:37,6,0	1/1:6,0:13:1.82:5,2,0	0/0:16,0:24:24.01:0,24,280	0/0:24,0:24:6.04:0,6,426	0/1:21,1:22:32.21:32,0,332	0/1:33,7:39:37.70:38,0,661	0/0:32,0:32:43:0,43,572	0/1:32,12:46:99:257,0,237	0/0:27,0:27:19.11:0,19,633	1/1:19,0:22:3.27:73,3,0	1/1:14,0:24:2.84:14,3,0	./.	0/1:27,0:25:35.57:36,0,220	0/1:20,0:20:35.57:36,0,140	0/0:42,0:42:39.67:0,40,799	0/1:17,0:19:42.84:43,0,114	0/1:28,2:31:72.76:84,0,73	1/1:8,0:18:22.73:112,23,0	0/1:6,0:5:20.56:21,0,113
chr10	107359552	.	T	TG	2071.16	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-6.262;DP=459;FS=0.000;HRun=8;HaplotypeScore=53.7262;InbreedingCoeff=0.8899;MQ=73.42;MQ0=0;MQRankSum=-0.740;QD=17.26;ReadPosRankSum=-1.530;VQSLOD=3.0379;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:69.01:0,69,630	1/1:5,6:11:9.03:101,9,0	0/0:7,0:7:12:0,12,110	0/1:13,0:13:3.49:3,0,70	0/0:16,0:16:33:0,33,300	0/0:4,0:4:9:0,9,82	0/0:33,1:34:58.36:0,58,767	1/1:4,17:21:51.04:562,51,0	0/0:10,0:10:30.02:0,30,274	0/0:20,0:20:48.01:0,48,434	0/0:15,0:15:38.92:0,39,337	1/1:0,13:14:23.67:257,24,0	0/0:12,0:13:38.03:0,38,324	0/0:15,0:15:36.01:0,36,328	0/0:14,0:14:35.99:0,36,320	0/0:17,0:17:36.01:0,36,329	0/0:27,0:27:69.01:0,69,627	0/0:17,0:17:42.01:0,42,384	1/1:1,5:5:15.03:163,15,0	1/1:0,4:4:9.03:104,9,0	1/1:7,27:34:60.18:692,60,0	0/0:15,0:15:36.01:0,36,328	0/0:10,0:10:20.04:0,20,171	0/0:33,0:33:84.03:0,84,768	0/0:15,0:15:32.75:0,33,286	0/0:21,0:21:50.99:0,51,456	1/1:1,16:17:33.04:381,33,0	0/0:5,0:5:12.01:0,12,110
chr10	107361135	.	C	CT	52.62	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.029;DP=509;FS=1.978;HRun=8;HaplotypeScore=52.7083;InbreedingCoeff=0.8434;MQ=66.65;MQ0=1;MQRankSum=0.556;QD=13.16;ReadPosRankSum=0.295;VQSLOD=2.9587;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,99,905	1/1:0,4:4:12.04:138,12,0	0/0:8,0:7:14.93:0,15,119	0/0:6,0:6:9.46:0,9,83	0/0:22,0:22:63.03:0,63,576	0/0:17,0:17:45.02:0,45,411	0/0:15,0:15:45.02:0,45,411	0/0:37,0:36:87.01:0,87,791	0/0:19,0:19:57.02:0,57,518	0/0:20,0:20:54.03:0,54,494	0/0:20,0:20:57.01:0,57,514	0/0:11,0:11:24.01:0,24,220	0/0:17,0:17:36.01:0,36,329	0/0:18,0:18:51.03:0,51,467	0/0:24,0:24:63.01:0,63,571	0/0:21,0:21:60.03:0,60,549	0/0:35,0:34:85.79:0,86,764	0/0:18,0:18:44.76:0,45,396	0/0:16,0:15:33.01:0,33,302	0/0:23,0:23:54.02:0,54,493	0/0:7,0:7:11.99:0,12,110	0/0:6,0:6:12:0,12,110	0/0:15,0:15:35.99:0,36,325	0/0:7,0:7:18.01:0,18,165	0/0:30,0:30:75.02:0,75,686	0/0:17,0:17:39.02:0,39,357	0/0:28,0:28:81.02:0,81,736	0/0:9,0:9:27.01:0,27,247
chr10	107361152	.	ATTTAT	A	341.88	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=4.645;DP=488;FS=0.000;HRun=0;HaplotypeScore=87.5460;InbreedingCoeff=0.6213;MQ=62.20;MQ0=2;MQRankSum=-3.430;QD=22.79;ReadPosRankSum=-1.267;VQSLOD=3.0864;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,2821	0/0:5,0:5:15.05:0,15,459	0/0:9,0:7:14.81:0,15,343	0/1:4,0:3:8.90:9,0,83	0/0:24,0:24:66.21:0,66,1890	0/0:17,0:17:51.18:0,51,1567	0/0:17,0:17:48.08:0,48,1277	0/0:32,0:28:75.24:0,75,2190	0/0:19,0:19:54.17:0,54,1594	0/0:25,0:25:63.22:0,63,1863	0/0:14,0:14:39.12:0,39,1126	1/1:3,8:11:21.07:432,21,0	0/0:14,0:14:36.12:0,36,1057	0/0:20,0:20:60.19:0,60,1715	0/0:21,0:21:48.16:0,48,1448	0/0:22,0:22:66.23:0,66,2028	0/0:30,0:29:81.25:0,81,2338	0/0:21,0:21:63.22:0,63,1796	0/0:20,0:16:48.16:0,48,1388	0/0:19,0:19:57.17:0,57,1399	0/0:4,0:4:12.04:0,12,347	0/0:5,0:5:15.05:0,15,417	0/0:11,0:11:33.11:0,33,1008	0/0:5,0:5:12.04:0,12,369	0/0:29,0:29:84.29:0,84,2425	0/0:17,0:17:48.16:0,48,1474	0/0:25,0:25:75.22:0,75,2068	0/0:11,0:11:30.10:0,30,922
chr10	107362654	.	T	TC	434.78	PASS	AB=0.807;AC=11;AF=0.196;AN=56;BaseQRankSum=-3.067;DP=388;FS=0.000;HRun=10;HaplotypeScore=44.0342;InbreedingCoeff=0.2223;MQ=65.58;MQ0=0;MQRankSum=-0.159;QD=4.22;ReadPosRankSum=-1.939;VQSLOD=-0.6895;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:47.80:0,48,380	1/1:1,3:4:2.80:32,3,0	0/0:16,0:11:11.60:0,12,82	0/1:16,0:12:26:68,0,26	0/0:8,0:8:5.98:0,6,49	0/0:7,0:7:8.96:0,9,74	0/0:18,1:20:11.98:0,12,294	0/1:12,1:13:37.39:37,0,80	0/0:17,0:18:40.94:0,41,325	0/0:5,0:5:14.98:0,15,123	0/0:4,0:4:8.97:0,9,74	1/1:12,0:12:2.74:12,3,0	0/0:15,0:15:29.93:0,30,246	0/0:14,0:16:40.98:0,41,325	0/0:16,0:18:46.50:0,46,357	0/0:19,0:19:44.93:0,45,369	0/0:21,0:24:63.04:0,63,485	0/0:19,0:19:53.74:0,54,423	0/1:7,5:13:10.51:78,0,11	1/1:2,3:5:3.01:32,3,0	0/1:17,10:28:47.56:205,0,48	0/0:13,0:13:29.80:0,30,236	0/0:8,0:8:11.98:0,12,99	0/0:18,0:18:32.67:0,33,270	0/0:12,0:12:20.96:0,21,172	0/0:12,0:12:20.95:0,21,170	0/1:5,6:11:31.24:110,0,31	0/0:4,0:5:5.03:0,5,30
chr10	107366158	.	T	TTTA	1956.52	PASS	AB=0.711;AC=5;AF=0.089;AN=56;BaseQRankSum=-6.826;DP=512;FS=34.074;HRun=0;HaplotypeScore=105.8224;InbreedingCoeff=-0.0989;MQ=67.18;MQ0=1;MQRankSum=-9.207;QD=26.09;ReadPosRankSum=-0.320;VQSLOD=1.8097;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.28:0,84,1401	0/0:8,0:8:21.07:0,21,343	0/0:13,0:11:27.02:0,27,394	0/0:13,0:10:20.62:0,21,210	0/0:28,0:28:81.28:0,81,1360	0/0:21,0:21:63.22:0,63,1063	0/0:15,0:15:45.15:0,45,737	0/1:7,11:18:69.63:599,0,70	0/0:17,0:17:51.17:0,51,860	0/0:21,0:21:57.18:0,57,922	0/0:22,0:22:63.22:0,63,1067	0/0:16,0:16:45.14:0,45,734	0/0:15,0:15:42.13:0,42,660	0/0:19,0:19:51.16:0,51,838	0/0:24,0:24:72.24:0,72,1175	0/0:31,0:31:90.29:0,90,1492	0/0:37,0:37:99:0,108,1700	0/0:22,0:22:63.22:0,63,1056	0/1:8,5:13:92.31:322,0,92	0/1:8,10:18:99:618,0,156	0/1:5,1:6:54.90:55,0,92	0/0:8,0:8:24.08:0,24,402	0/0:16,0:16:48.16:0,48,785	0/0:6,0:6:18.06:0,18,300	0/0:22,0:22:63.18:0,63,1005	0/0:25,0:25:75.25:0,75,1238	0/1:12,8:20:99:480,0,225	0/0:9,0:9:27.09:0,27,460
chr10	107367744	.	A	ACAAGACCACACCCACTC	8324.56	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=6.849;DP=731;FS=6.516;HRun=0;HaplotypeScore=314.3400;InbreedingCoeff=0.9555;MQ=62.86;MQ0=5;MQRankSum=-9.982;QD=46.51;ReadPosRankSum=-5.575;VQSLOD=2.6185;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:94.57:0,95,3284	1/1:3,8:13:3.01:208,3,0	0/0:20,0:14:20.65:0,21,390	0/0:43,0:37:65.96:0,66,1305	0/0:11,0:11:27.09:0,27,801	0/0:23,0:23:53.88:0,54,2078	0/0:25,0:25:45.14:0,45,1594	1/1:38,0:37:66.20:1586,66,0	0/0:26,0:26:72.21:0,72,2355	0/0:28,0:28:63.20:0,63,2157	0/0:21,0:21:48.16:0,48,1825	1/1:15,14:30:39.13:2721,39,0	0/0:31,0:31:75.26:0,75,2785	0/0:19,0:19:51.18:0,51,1940	0/0:22,0:22:48.15:0,48,1481	0/0:39,0:39:93.29:0,93,3007	0/0:38,0:38:81.25:0,81,2550	0/0:27,0:28:63.14:0,63,2193	1/1:25,0:25:41.80:1039,42,0	1/1:9,9:20:9.03:459,9,0	1/1:30,0:30:42.13:1089,42,0	0/0:22,0:22:60.21:0,60,2212	0/0:12,0:12:27.08:0,27,792	0/0:36,0:36:93.30:0,93,3639	0/0:21,0:21:45.14:0,45,1413	0/0:35,0:35:75.25:0,75,2731	1/1:22,0:22:46.04:1222,46,0	0/0:12,0:12:33.04:0,33,1138
chr10	107367761	.	CCAA	C	1843.41	PASS	AB=0.751;AC=7;AF=0.125;AN=56;BaseQRankSum=10.108;DP=749;FS=8.759;HRun=0;HaplotypeScore=117.7393;InbreedingCoeff=0.0994;MQ=56.58;MQ0=10;MQRankSum=-5.917;QD=12.54;ReadPosRankSum=0.432;VQSLOD=2.6156;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,2553	1/1:6,0:6:3.01:50,3,0	0/0:23,0:14:34.67:0,35,744	0/0:49,0:36:92.13:0,92,1810	0/0:12,0:12:36.12:0,36,815	0/0:24,0:24:72.25:0,72,1631	0/0:24,0:24:69.22:0,69,1520	0/1:21,17:37:99:666,0,1115	0/0:29,0:29:87.26:0,87,1876	0/0:25,0:25:72.23:0,72,1588	0/0:23,0:23:60.21:0,60,1358	0/0:29,0:28:54.37:0,54,993	0/0:32,0:32:93.32:0,93,2083	0/0:22,0:22:66.23:0,66,1495	0/0:23,0:23:69.22:0,69,1502	0/0:41,0:41:99:0,120,2629	0/0:32,0:32:90.31:0,90,2018	0/0:27,0:27:78.19:0,78,1647	0/1:11,11:22:99:486,0,614	0/1:16,0:16:7.78:8,0,422	0/1:26,15:40:99:267,0,1156	0/0:26,0:26:75.21:0,75,1644	0/0:12,0:12:33.10:0,33,704	0/0:38,0:38:99:0,114,2536	0/0:25,0:25:72.23:0,72,1584	0/0:34,0:34:90.31:0,90,2025	0/1:12,12:24:99:492,0,455	0/0:13,0:13:39.13:0,39,884
chr10	107367972	.	A	ACTGT	10197.83	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-8.965;DP=651;FS=5.501;HRun=0;HaplotypeScore=109.5598;InbreedingCoeff=0.9841;MQ=83.75;MQ0=0;MQRankSum=-9.334;QD=59.99;ReadPosRankSum=-1.089;VQSLOD=6.3180;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.25:0,84,1498	1/1:2,8:10:23.98:589,24,0	0/0:21,0:21:57.05:0,57,927	0/0:22,0:22:47.41:0,47,730	0/0:24,0:24:63.22:0,63,1167	0/0:25,0:25:63.20:0,63,1143	0/0:28,0:28:78.22:0,78,1419	1/1:10,26:37:96.30:2412,96,0	0/0:20,0:20:60.21:0,60,1113	0/0:21,0:21:57.19:0,57,1028	0/0:10,0:10:30.10:0,30,530	1/1:4,19:26:7.23:1488,7,0	0/0:26,0:26:75.26:0,75,1372	0/0:26,0:26:75.24:0,75,1368	0/0:17,0:17:48.16:0,48,883	0/0:29,0:29:84.27:0,84,1506	0/0:33,0:33:99:0,99,1783	0/0:22,0:22:66.19:0,66,1171	1/1:10,14:25:63.20:1573,63,0	1/1:3,11:14:30.10:721,30,0	1/1:4,33:38:77.82:2019,78,0	0/0:19,0:19:54.13:0,54,908	0/0:19,0:19:57.17:0,57,1003	0/0:22,0:22:66.23:0,66,1219	0/0:21,0:21:57.17:0,57,976	0/0:28,0:28:78.25:0,78,1391	1/1:3,17:17:57.08:1395,57,0	0/0:17,0:17:45.13:0,45,758
chr10	107371768	.	C	CA	3742.63	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.626;DP=497;FS=18.243;HRun=1;HaplotypeScore=59.3884;InbreedingCoeff=0.9943;MQ=58.40;MQ0=19;MQRankSum=-3.294;QD=35.64;ReadPosRankSum=-1.991;VQSLOD=1.5310;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.17:0,66,826	0/0:9,0:9:27.09:0,27,349	0/0:17,0:7:21.07:0,21,267	0/0:30,0:19:39.05:0,39,466	0/0:17,0:17:45.15:0,45,584	0/0:18,0:18:54.18:0,54,700	0/0:29,0:29:78.24:0,78,998	1/1:4,27:27:75.24:1101,75,0	0/0:13,0:13:36.12:0,36,467	0/0:12,0:12:27.09:0,27,351	0/0:15,0:15:36.10:0,36,451	0/0:15,0:15:42.14:0,42,544	0/0:10,0:10:30.10:0,30,389	0/0:8,0:8:21.07:0,21,272	0/0:14,0:14:42.12:0,42,530	0/0:19,0:19:54.16:0,54,687	0/0:26,0:26:75.20:0,75,941	0/0:21,0:21:60.19:0,60,777	1/1:10,17:18:51.17:759,51,0	1/1:0,18:18:48.12:693,48,0	1/1:0,11:11:30.10:449,30,0	0/0:9,0:9:21.07:0,21,272	0/0:7,0:7:18.06:0,18,234	0/0:33,0:33:93.30:0,93,1208	0/0:11,0:11:27.09:0,27,351	0/0:16,0:16:45.14:0,45,571	1/1:0,18:18:51.15:740,51,0	0/0:19,0:18:54.18:0,54,701
chr10	107372762	.	CAAA	C	1154.71	PASS	AB=0.588;AC=9;AF=0.161;AN=56;BaseQRankSum=7.252;DP=607;FS=4.103;HRun=10;HaplotypeScore=95.0641;InbreedingCoeff=0.8944;MQ=63.52;MQ0=15;MQRankSum=-4.050;QD=23.09;ReadPosRankSum=-1.704;VQSLOD=2.0531;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.17:0,60,1136	0/0:11,0:12:36.11:0,36,679	0/0:63,0:22:26:0,26,470	0/0:88,0:33:34.18:0,34,680	0/0:27,0:29:84.26:0,84,1640	0/0:16,0:16:45.15:0,45,898	0/0:16,0:17:51.14:0,51,962	1/1:1,15:15:27.09:367,27,0	0/0:7,0:7:18.02:0,18,331	0/0:27,0:27:75.21:0,75,1320	0/0:24,0:26:78.27:0,78,1494	0/0:16,0:17:42.12:0,42,758	0/0:19,0:19:57.20:0,57,1142	0/0:16,0:16:30.10:0,30,568	0/0:17,0:17:39.13:0,39,745	0/0:19,0:19:57.20:0,57,1127	0/0:23,0:23:66.23:0,66,1306	0/0:26,0:26:75.24:0,75,1479	1/1:2,10:11:27.08:355,27,0	1/1:0,7:7:18.05:244,18,0	1/1:0,5:5:6.02:82,6,0	0/0:18,0:18:45.15:0,45,896	0/0:19,0:19:54.18:0,54,1011	0/0:15,0:14:42.13:0,42,827	0/0:26,0:25:72.25:0,72,1444	0/0:20,0:20:60.15:0,60,1094	0/1:3,7:10:1.30:264,0,1	0/0:14,0:14:36.12:0,36,747
chr10	107373713	.	GTA	G	1211.88	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.810;DP=579;FS=16.919;HRun=0;HaplotypeScore=100.1516;InbreedingCoeff=0.8969;MQ=61.11;MQ0=1;MQRankSum=-4.480;QD=10.92;ReadPosRankSum=-4.305;VQSLOD=1.0411;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:55.04:0,55,793	0/0:2,0:8:21.02:0,21,211	0/0:3,0:2:0:0,0,0	0/0:7,0:6:8.74:0,9,67	0/0:34,0:34:90.23:0,90,1387	0/0:16,0:16:42.13:0,42,682	0/0:16,0:16:45.13:0,45,700	1/1:34,6:39:56.10:710,56,0	0/0:11,0:11:30.09:0,30,479	0/0:45,0:45:99:0,117,1817	0/0:30,0:30:77.89:0,78,1185	0/0:27,0:27:66.21:0,66,1091	0/0:23,0:23:60.15:0,60,930	0/0:22,0:22:60.17:0,60,953	0/0:31,0:31:84.22:0,84,1306	0/0:27,0:27:66.15:0,66,975	0/0:16,0:16:45.01:0,45,656	0/0:20,0:20:38.52:0,39,524	1/1:13,3:16:35.01:280,35,0	1/1:21,3:24:14.04:183,14,0	1/1:5,2:7:2.94:21,3,0	0/0:15,0:15:36.10:0,36,552	0/0:24,0:24:56.82:0,57,843	0/0:8,0:8:18.06:0,18,296	0/0:24,0:24:66.15:0,66,960	0/0:30,0:30:81.23:0,81,1247	1/1:23,1:24:13.88:180,14,0	0/0:8,0:8:24.05:0,24,349
chr10	107373731	.	G	GTATATATA	3569.24	PASS	AB=0.861;AC=6;AF=0.111;AN=54;BaseQRankSum=6.905;DP=548;FS=20.206;HRun=0;HaplotypeScore=152.0908;InbreedingCoeff=0.5608;MQ=62.31;MQ0=2;MQRankSum=-8.822;QD=41.03;ReadPosRankSum=-2.700;VQSLOD=1.5132;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:73.27:0,73,1792	0/0:8,0:8:24.08:0,24,584	0/0:8,0:5:3.85:0,4,48	0/0:8,0:6:3.41:0,3,19	0/0:37,0:37:99:0,99,2668	0/0:21,0:20:57.20:0,57,1599	0/0:15,0:15:42.11:0,42,1102	0/1:36,0:35:86:1394,0,86	0/0:19,0:19:54.11:0,54,1246	0/0:40,0:40:99:0,114,3003	0/0:34,0:34:93.26:0,93,2235	0/0:29,0:29:84.26:0,84,2162	0/0:20,0:20:60.17:0,60,1587	0/0:21,0:21:63.16:0,63,1610	0/0:28,0:28:84.26:0,84,2226	0/0:20,0:20:57.16:0,57,1504	0/0:15,0:15:45.14:0,45,1147	0/0:13,0:13:39.09:0,39,957	0/1:8,4:13:8.49:877,0,8	1/1:11,8:20:12.10:756,12,0	./.	0/0:11,0:11:33.10:0,33,903	0/0:23,0:23:57.15:0,57,1409	0/0:8,0:8:24.06:0,24,557	0/0:20,0:20:60.21:0,60,1626	0/0:27,0:27:81.25:0,81,2165	1/1:8,8:18:17.98:542,18,0	0/0:6,0:6:18.06:0,18,484
chr10	107373733	.	G	GTATATATATA	4716.93	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=3.637;DP=557;FS=16.304;HRun=0;HaplotypeScore=174.2797;InbreedingCoeff=0.9099;MQ=61.22;MQ0=3;MQRankSum=-10.029;QD=48.63;ReadPosRankSum=-4.586;VQSLOD=2.5932;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:65.96:0,66,1912	0/0:8,0:8:24.08:0,24,652	0/0:8,0:5:2.95:0,3,63	0/0:8,0:5:5.67:0,6,29	0/0:36,0:36:93.27:0,93,2632	0/0:21,0:20:54.19:0,54,1672	0/0:15,0:15:39.12:0,39,1139	1/1:28,12:43:73.08:2260,73,0	0/0:18,0:18:54.17:0,54,1429	0/0:39,0:39:99:0,102,3017	0/0:33,0:35:75.25:0,75,2189	0/0:29,0:29:78.25:0,78,2227	0/0:21,0:21:57.18:0,57,1643	0/0:21,0:21:54.19:0,54,1633	0/0:30,0:30:78.25:0,78,2314	0/0:19,0:19:48.16:0,48,1494	0/0:14,0:14:39.11:0,39,1115	0/0:12,0:13:30.10:0,30,887	1/1:13,1:15:31.66:1207,32,0	1/1:19,0:19:14.91:730,15,0	./.	0/0:12,0:12:30.10:0,30,929	0/0:21,0:21:51.13:0,51,1337	0/0:8,0:8:18.06:0,18,540	0/0:21,0:21:54.17:0,54,1590	0/0:27,0:27:72.22:0,72,2105	1/1:19,0:19:18.05:520,18,0	0/0:6,0:6:15.05:0,15,467
chr10	107374240	.	TC	T	536.87	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.128;DP=510;FS=0.000;HRun=9;HaplotypeScore=55.0749;InbreedingCoeff=0.6603;MQ=74.53;MQ0=0;MQRankSum=-3.161;QD=19.17;ReadPosRankSum=3.107;VQSLOD=3.9171;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.17:0,63,716	0/0:9,0:9:24.06:0,24,267	0/0:16,0:14:33:0,33,346	0/0:20,0:19:47.48:0,47,443	0/0:15,0:15:36.09:0,36,405	0/0:18,0:18:48.14:0,48,554	0/0:35,0:37:90.24:0,90,1018	0/0:11,0:13:12.25:0,12,83	0/0:16,0:16:45.13:0,45,518	0/0:24,0:24:60.18:0,60,692	0/0:6,0:6:15.03:0,15,164	1/1:3,25:28:69.03:631,69,0	0/0:17,0:17:48.14:0,48,553	0/0:16,0:18:44.97:0,45,499	0/0:17,0:17:48.11:0,48,540	0/0:22,0:22:63.15:0,63,705	0/0:36,0:35:75.45:0,75,1037	0/0:31,0:31:93.26:0,93,1062	0/0:7,0:8:6.28:0,6,35	0/0:6,0:6:3.47:0,3,26	0/0:9,0:15:2.84:0,3,14	0/0:23,0:23:63.16:0,63,701	0/0:14,0:14:27.08:0,27,311	0/0:18,0:18:51.15:0,51,589	0/0:15,1:16:14.64:0,15,411	0/0:22,0:22:57.16:0,57,648	0/0:7,0:8:20.49:0,20,125	0/0:12,0:12:30.08:0,30,337
chr10	107375892	.	TAA	T	1440.08	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.174;DP=527;FS=7.604;HRun=14;HaplotypeScore=74.9542;InbreedingCoeff=0.9762;MQ=81.60;MQ0=1;MQRankSum=0.430;QD=16.36;ReadPosRankSum=3.169;VQSLOD=2.7350;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:30:62.12:0,62,743	0/0:6,0:6:18.06:0,18,252	0/0:31,0:25:22.63:0,23,227	0/0:15,0:14:7.96:0,8,154	0/0:18,0:19:39.11:0,39,518	0/0:18,0:20:47.08:0,47,534	0/0:16,0:16:32.05:0,32,359	1/1:4,19:24:50.82:510,51,0	0/0:8,0:10:25.10:0,25,273	0/0:16,1:19:16.79:0,17,461	0/0:17,0:20:46.60:0,47,540	0/0:16,0:20:49.59:0,50,557	0/0:16,0:19:53.03:0,53,567	0/0:11,0:12:36.02:0,36,386	0/0:12,0:13:35.61:0,36,469	0/0:20,0:22:53.54:0,54,676	0/0:26,0:27:66.61:0,67,832	0/0:27,0:27:72.23:0,72,991	1/1:3,12:16:35.71:314,36,0	1/1:4,11:17:29.64:261,30,0	1/1:3,13:16:30:278,30,0	0/0:13,0:13:24.06:0,24,306	0/0:15,0:17:42.10:0,42,527	0/0:19,0:20:26.41:0,26,655	0/0:19,0:23:53.10:0,53,623	0/0:21,0:22:35.54:0,36,415	1/1:3,11:15:22.32:252,22,0	0/0:14,0:17:38.61:0,39,498
chr10	107379386	.	T	TGC	7215.70	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-14.024;DP=771;FS=5.436;HRun=0;HaplotypeScore=96.0596;InbreedingCoeff=0.9995;MQ=83.57;MQ0=0;MQRankSum=-3.429;QD=50.11;ReadPosRankSum=-1.942;VQSLOD=4.8273;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,1700	1/1:2,13:15:35.91:685,36,0	0/0:32,0:32:93.29:0,93,1368	0/0:28,0:29:67.33:0,67,1067	0/0:18,0:18:54.17:0,54,805	0/0:25,0:25:72.24:0,72,1102	0/0:48,0:48:99:0,141,2065	1/1:3,18:21:57.17:1030,57,0	0/0:35,0:35:99:0,105,1601	0/0:23,0:23:66.22:0,66,1006	0/0:13,0:13:36.11:0,36,517	0/0:31,0:31:90.29:0,90,1356	0/0:27,0:27:81.24:0,81,1210	0/0:38,0:38:99:0,108,1588	0/0:32,0:32:96.33:0,96,1465	0/0:38,0:38:99:0,111,1679	0/0:35,0:35:99:0,102,1506	0/0:28,0:28:81.19:0,81,1185	1/1:4,17:21:60.21:1125,60,0	1/1:0,9:9:27.09:521,27,0	1/1:2,50:55:99:2598,135,0	0/0:10,0:10:27.08:0,27,392	0/0:16,0:16:45.15:0,45,689	0/0:56,0:56:99:0,166,2497	0/0:13,0:13:39.13:0,39,597	0/0:27,0:27:78.26:0,78,1194	1/1:2,21:22:66.23:1256,66,0	0/0:13,0:13:39.13:0,39,597
chr10	107379484	.	AGT	A	387.91	PASS	AB=0.934;AC=22;AF=0.458;AN=48;BaseQRankSum=6.356;DP=715;FS=2.959;HRun=0;HaplotypeScore=95.2424;InbreedingCoeff=-0.2693;MQ=65.39;MQ0=15;MQRankSum=-0.416;QD=0.83;ReadPosRankSum=2.340;VQSLOD=1.7969;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:37,5:42:40.39:40,0,306	./.	./.	./.	0/1:13,0:13:17.48:17,0,164	0/0:12,0:12:18.03:0,18,239	0/1:36,5:41:55.61:56,0,381	./.	0/1:20,1:21:5.64:6,0,316	0/1:20,0:20:21.64:22,0,161	0/0:15,0:15:5:0,5,235	0/0:21,0:40:7.53:0,8,159	0/1:23,1:25:27.57:28,0,181	0/0:24,0:24:7.25:0,7,325	0/1:29,2:31:89.59:90,0,393	0/1:19,0:22:35.19:35,0,289	0/0:35,5:41:3.97:0,4,524	0/1:31,0:32:0.70:1,0,507	1/1:29,0:28:5.52:25,6,0	1/1:10,0:10:2.51:7,3,0	1/1:53,0:53:0.21:0,0,0	0/1:16,2:18:17.71:18,0,142	0/1:14,1:15:17.68:18,0,151	0/1:44,7:51:61.96:62,0,674	0/1:15,2:16:14.76:15,0,153	0/0:26,0:26:32.73:0,33,413	1/1:18,0:18:16.66:82,17,0	0/1:10,0:10:8.46:8,0,226
chr10	107379520	.	TGTGTGTGC	T	1670.54	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=3.794;DP=698;FS=12.948;HRun=0;HaplotypeScore=160.2395;InbreedingCoeff=0.7586;MQ=59.85;MQ0=14;MQRankSum=-1.669;QD=11.60;ReadPosRankSum=-2.716;VQSLOD=0.8056;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:94.54:0,95,2020	1/1:7,0:7:17.89:172,18,0	0/1:15,0:6:17.88:55,0,18	0/1:18,0:13:31.96:97,0,32	0/0:17,0:17:47.93:0,48,1130	0/0:17,0:17:41.95:0,42,1106	0/0:38,0:38:94.02:0,94,2408	1/1:24,0:21:51.84:452,52,0	0/0:27,0:27:71.15:0,71,1507	0/0:26,0:26:48.47:0,48,1328	0/0:18,0:17:23.11:0,23,1103	0/0:41,0:41:70.44:0,70,1342	0/0:23,0:23:61.71:0,62,1221	0/0:30,0:30:69.58:0,70,1842	0/0:32,0:32:84.02:0,84,2236	0/0:26,0:26:71.82:0,72,1635	0/0:38,0:38:55.22:0,55,2514	0/0:28,0:27:78.51:0,79,2445	1/1:0,7:7:20.99:293,21,0	1/1:10,1:11:10.77:254,11,0	1/1:9,35:44:1.82:6,2,0	0/0:20,0:20:51.80:0,52,1036	0/0:20,0:20:44.70:0,45,822	0/0:57,0:55:99:0,132,3520	0/0:22,0:22:47.98:0,48,1045	0/0:24,0:24:67.12:0,67,1836	1/1:2,16:18:18.85:523,19,0	0/0:8,0:8:23.95:0,24,844
chr10	107379942	.	T	TGG	1579.64	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.619;DP=541;FS=10.851;HRun=8;HaplotypeScore=76.3713;InbreedingCoeff=0.9789;MQ=81.76;MQ0=1;MQRankSum=-1.042;QD=13.39;ReadPosRankSum=-4.636;VQSLOD=-0.5257;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:68.43:0,68,781	1/1:7,0:7:18.05:200,18,0	0/0:22,0:22:47.98:0,48,484	0/0:22,0:22:24.59:0,25,239	0/0:14,0:14:33.08:0,33,366	0/0:14,0:14:39.09:0,39,434	0/0:30,0:30:72.13:0,72,773	1/1:11,6:19:19.87:227,20,0	0/0:17,0:17:33.05:0,33,359	0/0:19,0:19:42.10:0,42,468	0/0:10,0:10:24.05:0,24,266	1/1:6,2:16:11.54:124,12,0	0/0:17,0:17:45.11:0,45,501	0/0:20,0:20:48.08:0,48,525	0/0:21,0:21:54.13:0,54,602	0/0:20,0:20:51.12:0,51,559	0/0:28,0:28:72.17:0,72,803	0/0:29,0:29:78.20:0,78,867	1/1:10,3:13:12.26:139,12,0	1/1:7,2:10:12.48:109,12,0	1/1:9,14:30:22.54:251,23,0	0/0:17,0:17:39.09:0,39,434	0/0:12,0:12:36.10:0,36,399	0/0:35,0:34:93.21:0,93,1024	0/0:9,0:10:26.80:0,27,279	0/0:21,0:21:54.12:0,54,592	1/1:10,12:22:53.55:722,54,0	0/0:10,0:10:27.07:0,27,301
chr10	107379946	.	G	GGT	575.78	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=7.896;DP=546;FS=25.613;HRun=0;HaplotypeScore=79.4088;InbreedingCoeff=0.1267;MQ=83.56;MQ0=1;MQRankSum=-3.755;QD=4.96;ReadPosRankSum=1.216;VQSLOD=0.6222;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:89.29:0,89,1235	1/1:1,7:8:18.06:322,18,0	0/0:23,0:23:63.11:0,63,848	0/0:24,0:24:24.24:0,24,558	0/0:13,0:13:36.11:0,36,524	0/0:15,0:15:42.13:0,42,615	0/0:29,0:29:84.23:0,84,1182	0/1:17,0:17:50.73:51,0,121	0/0:17,0:17:45.09:0,45,596	0/0:21,0:21:51.15:0,51,718	0/0:10,0:10:27.08:0,27,390	0/1:16,0:16:14.06:14,0,95	0/0:18,0:18:51.14:0,51,729	0/0:20,0:20:57.15:0,57,800	0/0:19,0:19:57.18:0,57,843	0/0:19,0:19:51.17:0,51,771	0/0:28,0:28:81.24:0,81,1165	0/0:32,0:32:87.20:0,87,1245	0/1:13,0:13:33.11:33,0,155	0/1:9,0:9:19.23:19,0,25	0/1:32,0:31:45.76:46,0,150	0/0:16,0:16:43.37:0,43,618	0/0:13,0:13:39.12:0,39,571	0/0:36,0:35:99:0,105,1492	0/0:11,0:11:33.06:0,33,437	0/0:22,0:22:63.19:0,63,889	0/1:21,0:21:19.98:232,0,20	0/0:11,0:11:30.09:0,30,432
chr10	107383495	.	T	TTCC	4527.20	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-7.115;DP=608;FS=2.008;HRun=0;HaplotypeScore=84.5057;InbreedingCoeff=0.9125;MQ=64.09;MQ0=5;MQRankSum=0.585;QD=28.12;ReadPosRankSum=-0.611;VQSLOD=4.9299;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:96.29:0,96,1350	1/1:0,8:9:15.05:306,15,0	0/1:29,0:21:9.90:10,0,416	0/0:32,0:22:20.30:0,20,184	0/0:15,0:15:36:0,36,474	0/0:17,0:17:48.13:0,48,655	0/0:33,0:33:72.24:0,72,1041	1/1:9,11:20:32.90:366,33,0	0/0:25,0:25:60.18:0,60,832	0/0:22,0:22:51.16:0,51,705	0/0:14,0:14:36.08:0,36,464	1/1:5,16:23:25.18:839,25,0	0/0:12,0:12:27.08:0,27,372	0/0:21,0:20:57.18:0,57,807	0/0:18,0:18:45.15:0,45,649	0/0:31,0:31:81.24:0,81,1119	0/0:29,0:29:75.08:0,75,987	0/0:28,0:28:69.20:0,69,958	1/1:8,12:20:36.04:601,36,0	1/1:2,16:19:30.05:564,30,0	1/1:1,14:16:33.11:675,33,0	0/0:17,0:17:42.07:0,42,581	0/0:17,0:17:30.07:0,30,396	0/0:24,0:24:45.11:0,45,592	0/0:18,0:18:45.09:0,45,575	0/0:22,0:22:57.14:0,57,740	1/1:3,20:24:57.20:1166,57,0	0/0:10,0:10:30.10:0,30,434
chr10	107385447	.	CCCTT	C	307.14	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=5.435;DP=530;FS=8.495;HRun=0;HaplotypeScore=78.1327;InbreedingCoeff=0.3428;MQ=46.35;MQ0=65;MQRankSum=-1.640;QD=6.68;ReadPosRankSum=3.074;VQSLOD=0.8912;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:30:66.12:0,66,1194	0/0:4,0:4:5.97:0,6,47	0/0:6,0:1:3.01:0,3,30	0/0:8,0:2:6.02:0,6,96	0/0:12,0:9:24.04:0,24,437	0/0:22,0:21:49.97:0,50,1080	0/0:27,0:23:51.15:0,51,1066	0/0:32,0:6:3:0,3,28	0/0:14,0:11:18.05:0,18,394	0/0:31,0:21:54.11:0,54,984	0/0:6,0:5:15.05:0,15,333	1/1:7,13:16:24.08:398,24,0	0/0:28,0:19:38.93:0,39,756	0/0:20,0:16:30.04:0,30,582	0/0:22,0:18:45.13:0,45,962	0/0:17,0:17:39.13:0,39,851	0/0:31,0:26:45.19:0,45,993	0/0:22,0:19:43.90:0,44,806	0/0:19,0:10:2.18:0,2,214	0/0:8,0:5:5.97:0,6,46	0/1:26,0:17:8.96:9,0,71	0/0:20,0:18:39.05:0,39,758	0/0:12,0:11:30.07:0,30,535	0/0:29,0:24:7:0,7,684	0/0:8,0:7:15.04:0,15,318	0/0:29,0:22:42.03:0,42,796	0/0:11,0:9:7.17:0,7,150	0/0:9,0:7:15.03:0,15,291
chr10	107385857	.	ATCTG	A	5794.61	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.387;DP=751;FS=11.781;HRun=0;HaplotypeScore=133.7766;InbreedingCoeff=0.9912;MQ=65.40;MQ0=0;MQRankSum=-4.461;QD=35.99;ReadPosRankSum=-1.892;VQSLOD=4.1308;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.31:0,90,2276	0/0:4,0:4:11.71:0,12,238	0/0:26,0:24:62.84:0,63,1370	0/0:22,0:22:53.92:0,54,1223	0/0:13,0:13:36.12:0,36,899	0/0:18,0:18:48.16:0,48,1186	0/0:38,0:38:96.33:0,96,2362	1/1:6,24:30:72.22:1189,72,0	0/0:30,0:30:72.25:0,72,1788	0/0:25,0:26:75.21:0,75,1751	0/0:12,0:12:30.10:0,30,723	0/0:32,0:32:93.32:0,93,2264	0/0:37,0:37:99:0,99,2466	0/0:30,0:30:81.28:0,81,1977	0/0:23,0:23:57.20:0,57,1402	0/0:26,0:26:75.24:0,75,1764	0/0:50,0:50:99:0,135,3199	0/0:37,0:37:99:0,99,2426	1/1:5,24:29:69.15:1073,69,0	1/1:1,8:9:24.08:402,24,0	1/1:9,65:74:99:2309,141,0	0/0:15,0:15:36.12:0,36,909	0/0:14,0:14:42.13:0,42,952	0/0:49,0:49:99:0,135,3362	0/0:18,0:18:51.18:0,51,1289	0/0:25,0:25:69.22:0,69,1619	1/1:2,17:19:47.96:821,48,0	0/0:11,0:11:24.05:0,24,547
chr10	107386702	.	GACAGACACACACACACAC	G	915.35	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=0.349;DP=533;FS=6.722;HRun=0;HaplotypeScore=202.3723;InbreedingCoeff=0.6732;MQ=53.83;MQ0=26;MQRankSum=0.019;QD=6.02;ReadPosRankSum=-2.219;VQSLOD=1.8634;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:23.77:0,24,845	1/1:4,0:3:2.99:24,3,0	0/1:11,0:7:1.65:2,0,48	0/0:11,0:5:11.95:0,12,100	0/0:14,0:14:36.02:0,36,872	0/0:16,0:15:39.07:0,39,1108	0/0:28,0:25:50.86:0,51,712	1/1:19,0:16:17.75:149,18,0	0/0:23,0:23:50.15:0,50,1749	0/0:34,0:33:66.95:0,67,1979	0/0:4,0:4:12.01:0,12,450	1/1:3,23:25:0.17:148,0,0	0/0:17,0:16:31.79:0,32,911	0/0:9,0:9:17.97:0,18,429	0/0:22,0:20:33.53:0,34,1250	0/0:15,0:15:33.02:0,33,1163	0/0:29,0:28:30:0,30,1182	0/0:31,0:28:74.89:0,75,1697	0/1:18,0:16:15.71:146,0,16	1/1:9,0:9:16.15:118,16,0	1/1:30,0:23:11.02:99,11,0	0/0:15,0:15:36.04:0,36,940	0/0:11,0:10:20.92:0,21,187	0/0:37,0:35:53.08:0,53,2814	0/1:10,0:9:0.42:0,0,566	0/0:20,0:20:31.13:0,31,1445	1/1:25,0:25:9.53:395,10,0	0/0:7,0:6:15:0,15,550
chr10	107386706	.	GACAC	G	341.27	PASS	AB=0.760;AC=11;AF=0.239;AN=46;BaseQRankSum=1.794;DP=549;FS=18.298;HRun=0;HaplotypeScore=92.7398;InbreedingCoeff=0.5236;MQ=51.94;MQ0=30;MQRankSum=0.218;QD=1.88;ReadPosRankSum=0.551;VQSLOD=0.6316;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,12:36:3.06:41,0,3	0/0:4,0:3:2.96:0,3,19	./.	./.	0/0:15,0:15:11.99:0,12,111	0/0:17,0:16:6.41:0,6,147	1/1:29,0:25:11.67:79,12,0	0/0:16,0:13:0:0,0,0	0/0:21,0:23:3.97:0,4,206	0/0:32,0:35:33.35:0,33,242	0/0:6,0:5:8.88:0,9,61	1/1:26,0:25:2.72:28,3,0	0/0:16,0:16:14.10:0,14,77	0/0:9,0:8:6:0,6,73	0/0:25,0:21:20.99:0,21,243	0/0:16,0:16:17.55:0,18,217	1/1:21,8:29:7.04:159,7,0	1/1:28,1:30:2.26:147,2,0	0/0:18,0:17:0:0,0,0	./.	./.	0/0:17,0:17:0.82:0,1,59	./.	0/0:35,0:33:38.74:0,39,471	0/0:11,0:10:8.99:0,9,74	0/0:23,0:23:22.72:0,23,261	1/1:25,0:25:2.96:19,3,0	0/0:8,0:7:6.02:0,6,79
chr10	107386796	.	CCTGTCAACA	C	370.38	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.400;DP=687;FS=4.214;HRun=0;HaplotypeScore=188.9018;InbreedingCoeff=0.9801;MQ=94.08;MQ0=0;MQRankSum=-3.797;QD=61.73;ReadPosRankSum=1.089;VQSLOD=3.4803;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,4955	1/1:1,5:6:15.05:459,15,0	0/0:34,0:34:93.30:0,93,3913	0/0:36,0:36:96.33:0,96,4044	0/0:16,0:16:48.16:0,48,2190	0/0:21,0:21:63.22:0,63,2941	0/0:33,0:33:99:0,99,4531	0/0:38,0:38:99:0,108,4629	0/0:34,0:34:99:0,102,4739	0/0:22,0:22:60.20:0,60,2802	0/0:11,0:11:33.11:0,33,1525	0/0:36,0:36:99:0,105,5107	0/0:20,0:20:60.21:0,60,2849	0/0:27,0:27:75.26:0,75,3639	0/0:24,0:24:66.21:0,66,3088	0/0:27,0:27:81.28:0,81,3858	0/0:22,0:22:60.21:0,60,2801	0/0:19,0:18:54.19:0,54,2596	0/0:25,0:25:69.23:0,69,3141	0/0:15,0:15:45.15:0,45,2114	0/0:55,0:55:99:0,160,7111	0/0:21,0:21:63.22:0,63,2929	0/0:9,0:9:27.09:0,27,1255	0/0:34,0:34:99:0,99,4588	0/0:12,0:12:36.11:0,36,1611	0/0:34,0:34:99:0,99,4436	0/0:11,0:11:30.10:0,30,1410	0/0:8,0:8:24.08:0,24,1087
chr10	107387331	.	ACTGAGG	A	2128.79	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.880;DP=358;FS=18.601;HRun=0;HaplotypeScore=75.3648;InbreedingCoeff=0.9187;MQ=95.38;MQ0=0;MQRankSum=-7.286;QD=47.31;ReadPosRankSum=-0.870;VQSLOD=1.8604;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.21:0,60,2110	0/0:4,0:4:9.03:0,9,324	0/0:15,0:15:39.13:0,39,1373	0/0:21,0:21:57.19:0,57,1729	0/0:9,0:9:24.08:0,24,856	0/0:17,0:17:45.11:0,45,1417	0/0:14,0:14:42.14:0,42,1514	1/1:1,18:19:51.17:1165,51,0	0/0:14,0:14:42.14:0,42,1429	0/0:15,0:15:45.15:0,45,1528	0/0:9,0:9:24.08:0,24,809	0/0:19,0:19:53.90:0,54,1922	0/0:10,0:10:30.10:0,30,1071	0/0:10,0:10:30.10:0,30,1077	0/0:12,0:12:36.12:0,36,1256	0/0:12,0:12:36.12:0,36,1239	0/0:23,0:23:66.23:0,66,2358	0/0:22,0:22:60.21:0,60,2164	1/1:0,6:6:18.06:432,18,0	1/1:1,3:4:6.02:144,6,0	1/1:1,10:11:18.06:367,18,0	0/0:10,0:10:30.10:0,30,1037	0/0:12,0:12:33.11:0,33,1076	0/0:21,0:21:63.22:0,63,2224	0/0:10,0:10:27.09:0,27,968	0/0:12,0:12:36.12:0,36,1221	1/1:0,5:5:9.03:184,9,0	0/0:2,0:2:6.02:0,6,216
chr10	107387758	.	G	GA	126.34	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.860;DP=333;FS=0.000;HRun=10;HaplotypeScore=43.4750;InbreedingCoeff=0.5797;MQ=68.12;MQ0=1;MQRankSum=0.093;QD=12.63;ReadPosRankSum=1.311;VQSLOD=2.6592;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:16:37.99:0,38,301	1/1:3,7:10:12.25:212,12,0	0/0:9,0:8:7.64:0,8,58	0/0:3,0:3:3.81:0,4,18	0/0:19,0:20:49.90:0,50,392	0/0:15,0:15:44.10:0,44,342	0/0:9,0:9:23.97:0,24,197	0/0:32,0:32:65.77:0,66,527	0/0:6,0:6:17.98:0,18,148	0/0:13,0:15:31.98:0,32,252	0/0:11,0:11:29.88:0,30,239	0/0:7,0:7:17.91:0,18,140	0/0:11,0:11:29.89:0,30,236	0/0:8,0:8:20.97:0,21,172	0/0:7,0:7:17.96:0,18,145	0/0:8,0:9:26:0,26,200	0/0:24,0:24:62.92:0,63,517	0/0:12,0:12:29.94:0,30,242	0/0:12,0:13:32:0,32,252	0/0:11,0:11:26.97:0,27,222	0/0:4,0:4:8.98:0,9,74	0/0:9,0:10:22.99:0,23,178	0/0:7,0:7:17.98:0,18,148	0/0:4,0:4:8.99:0,9,74	0/0:18,0:18:41.93:0,42,345	0/0:17,0:17:44.94:0,45,369	0/0:12,0:13:34.98:0,35,274	0/0:9,2:11:0.92:0,1,208
chr10	107388264	.	AT	A	2567.75	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.340;DP=670;FS=27.078;HRun=7;HaplotypeScore=85.7817;InbreedingCoeff=0.9957;MQ=69.19;MQ0=1;MQRankSum=-0.760;QD=22.14;ReadPosRankSum=-1.851;VQSLOD=1.6714;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,1500	0/0:19,0:19:51.14:0,51,625	0/0:18,0:18:39.97:0,40,461	0/0:19,0:18:36.59:0,37,453	0/0:23,0:23:60.19:0,60,754	0/0:21,0:21:60.19:0,60,755	0/0:24,0:24:63.19:0,63,778	1/1:6,32:38:93.16:934,93,0	0/0:15,0:15:42.13:0,42,527	0/0:36,0:36:96.31:0,96,1206	0/0:18,0:18:54.16:0,54,666	0/0:30,0:30:74.86:0,75,797	0/0:23,0:23:60.18:0,60,742	0/0:21,0:21:60.18:0,60,738	0/0:39,0:39:99:0,114,1418	0/0:30,0:30:87.27:0,87,1080	0/0:15,0:15:45.14:0,45,566	0/0:25,0:25:72.19:0,72,886	1/1:2,15:17:45.04:436,45,0	1/1:3,33:36:80.30:824,80,0	1/1:0,14:14:30.06:308,30,0	0/0:19,0:19:51.16:0,51,630	0/0:23,0:23:66.19:0,66,804	0/0:28,0:28:78.21:0,78,943	0/0:28,0:28:81.25:0,81,1006	0/0:28,0:28:69.22:0,69,867	1/1:1,10:10:24.05:243,24,0	0/0:6,0:6:15.05:0,15,189
chr10	107388308	.	CTGTCTG	C	1105.55	PASS	AB=0.978;AC=7;AF=0.130;AN=54;BaseQRankSum=8.065;DP=776;FS=2.299;HRun=0;HaplotypeScore=191.0933;InbreedingCoeff=0.4471;MQ=55.23;MQ0=9;MQRankSum=-3.504;QD=10.14;ReadPosRankSum=-1.840;VQSLOD=2.6721;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,3372	0/0:11,0:11:33.11:0,33,825	0/0:7,0:1:3.01:0,3,42	./.	0/0:24,0:24:69.22:0,69,1921	0/0:31,0:29:78.72:0,79,2009	0/0:24,0:24:69.22:0,69,1656	0/1:27,0:27:46.19:283,0,46	0/0:25,0:25:74.84:0,75,2164	0/0:46,0:44:99:0,129,3375	0/0:22,0:22:61.08:0,61,1820	0/0:41,0:39:26.94:0,27,536	0/0:32,0:32:73.94:0,74,2008	0/0:34,0:34:99:0,99,2808	0/0:59,0:59:99:0,178,4980	0/0:48,0:48:99:0,144,4002	0/0:22,0:22:62.96:0,63,1512	0/0:30,0:30:84.72:0,85,2419	0/1:12,0:11:49.76:113,0,50	1/1:21,9:30:19.33:413,19,0	0/1:26,2:28:92.37:156,0,92	0/0:31,0:31:87.75:0,88,2217	0/0:35,0:35:90.52:0,91,2096	0/0:32,0:32:90.09:0,90,2317	0/0:33,0:33:90.29:0,90,2495	0/0:23,0:25:54.33:0,54,1705	1/1:8,4:11:9.28:276,9,0	0/0:9,0:7:21.07:0,21,620
chr10	107388314	.	G	GTCTCTCTCTCTCTCTCTC	646.89	PASS	AB=1.000;AC=4;AF=0.077;AN=52;BaseQRankSum=2.990;DP=783;FS=1.293;HRun=0;HaplotypeScore=382.4817;InbreedingCoeff=0.5356;MQ=55.03;MQ0=9;MQRankSum=-3.893;QD=7.44;ReadPosRankSum=-2.309;VQSLOD=0.5070;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,100,3465	0/0:11,0:11:24.08:0,24,1038	./.	./.	0/0:24,0:24:47.20:0,47,2049	0/0:31,0:29:68.58:0,69,2438	0/0:23,0:23:63.20:0,63,2342	0/0:26,0:26:52.76:0,53,829	0/0:28,0:28:72.25:0,72,3115	0/0:45,0:43:99:0,103,4187	0/0:21,0:21:52.99:0,53,2260	1/1:20,18:47:15.05:733,15,0	0/0:28,0:29:63.21:0,63,2386	0/0:32,0:33:87.28:0,87,3779	0/0:59,0:61:99:0,172,7059	0/0:45,0:50:99:0,141,6206	0/0:21,0:21:54.11:0,54,1999	0/0:27,0:27:75.23:0,75,3202	0/1:13,0:12:0.86:1,0,558	0/0:30,0:30:21.74:0,22,727	0/0:32,0:32:44.95:0,45,1259	0/0:31,0:31:86.65:0,87,3432	0/0:30,0:30:66.20:0,66,2505	0/0:33,0:33:87.28:0,87,3382	0/0:32,0:32:87.25:0,87,3140	0/1:25,0:25:8.54:9,0,2439	0/0:15,0:14:25.54:0,26,663	0/0:8,0:7:18.06:0,18,599
chr10	107388327	.	TCTCA	T	506.54	PASS	AB=0.967;AC=8;AF=0.143;AN=56;BaseQRankSum=5.521;DP=843;FS=3.589;HRun=0;HaplotypeScore=169.8996;InbreedingCoeff=0.1934;MQ=55.87;MQ0=13;MQRankSum=1.160;QD=3.93;ReadPosRankSum=-2.521;VQSLOD=2.4546;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,1957	0/1:8,1:9:41.54:42,0,285	0/0:19,0:3:2.88:0,3,38	0/0:18,0:5:5.59:0,6,34	0/0:27,0:27:75.13:0,75,1266	0/0:29,0:28:81.08:0,81,1421	0/0:27,0:27:81.16:0,81,1330	0/1:29,0:29:99:154,0,166	0/0:29,0:29:82.05:0,82,1681	0/0:46,0:44:99:0,130,2283	0/0:24,0:24:44.14:0,44,1274	0/0:52,0:50:29.83:0,30,268	0/0:29,0:29:80.96:0,81,1341	0/0:34,0:34:99:0,102,2066	0/0:63,0:63:99:0,189,3958	0/0:53,0:53:99:0,155,3059	0/0:23,0:23:64.68:0,65,1186	0/0:31,0:31:69.95:0,70,1849	0/1:16,0:14:69.02:81,0,69	1/1:20,9:29:1.89:157,2,0	0/1:31,1:32:46.08:63,0,46	0/0:34,0:34:99:0,100,1840	0/0:31,0:31:81.17:0,81,1455	0/0:35,0:35:95.71:0,96,1837	0/0:32,0:32:90.15:0,90,1646	0/0:26,0:26:74.58:0,75,1426	1/1:11,3:14:1.29:137,1,0	0/0:9,0:7:21.03:0,21,337
chr10	107388329	.	TCA	T	1968.51	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.087;DP=865;FS=0.944;HRun=0;HaplotypeScore=144.0103;InbreedingCoeff=0.8890;MQ=55.49;MQ0=13;MQRankSum=-0.844;QD=15.75;ReadPosRankSum=-2.498;VQSLOD=3.3741;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:93.17:0,93,1310	0/0:11,0:11:1.48:0,1,238	0/0:21,0:4:7.26:0,7,62	0/0:21,0:7:9.04:0,9,57	0/0:26,0:26:63.08:0,63,867	0/0:30,0:29:43.05:0,43,934	0/0:28,0:28:75.11:0,75,1056	1/1:22,8:30:54.08:592,54,0	0/0:29,0:29:57.42:0,57,1157	0/0:46,0:44:73.46:0,73,1377	0/0:24,0:24:60.13:0,60,874	0/0:50,0:48:23.39:0,23,185	0/0:27,0:27:59.70:0,60,1007	0/0:33,0:33:80.79:0,81,1366	0/0:65,0:65:99:0,150,2631	0/0:53,0:53:79.49:0,79,1994	0/0:25,0:25:64.28:0,64,862	0/0:31,0:31:63.96:0,64,1205	1/1:11,6:15:30.02:315,30,0	1/1:15,14:29:26.90:314,27,0	1/1:20,14:34:42.58:566,43,0	0/0:36,0:36:99:0,99,1382	0/0:30,1:31:72.11:0,72,1038	0/0:35,0:35:87.19:0,87,1321	0/0:33,0:33:66.21:0,66,1063	0/0:29,0:29:60.77:0,61,1070	1/1:10,5:15:30.08:354,30,0	0/0:10,0:8:3.99:0,4,188
chr10	107388447	.	GAGAC	G	6471.59	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.584;DP=1046;FS=1.953;HRun=0;HaplotypeScore=199.5773;InbreedingCoeff=1.0000;MQ=60.14;MQ0=1;MQRankSum=-5.762;QD=36.36;ReadPosRankSum=-0.444;VQSLOD=4.7570;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:64:99:0,193,4845	0/0:14,0:14:42.13:0,42,1040	0/0:38,0:30:50.64:0,51,1248	0/0:43,0:36:95.11:0,95,1699	0/0:30,0:30:87.06:0,87,2187	0/0:25,0:24:66.21:0,66,1662	0/0:33,0:33:93.25:0,93,2268	1/1:2,32:34:93.19:1532,93,0	0/0:38,0:38:99:0,114,2929	0/0:32,0:32:93.31:0,93,2419	0/0:18,0:18:54.14:0,54,1255	0/0:70,0:68:99:0,175,4454	0/0:38,0:38:99:0,111,2765	0/0:49,0:49:99:0,144,3657	0/0:73,0:73:99:0,208,4929	0/0:67,0:67:99:0,199,4816	0/0:28,0:28:81.22:0,81,2044	0/0:29,0:29:60.67:0,61,2002	1/1:0,22:22:66.14:1071,66,0	1/1:6,21:26:56.99:839,57,0	1/1:6,67:72:99:2324,129,0	0/0:23,0:23:66.21:0,66,1652	0/0:20,0:20:57.12:0,57,1313	0/0:46,0:46:99:0,135,3405	0/0:20,0:20:57.09:0,57,1346	0/0:50,0:50:99:0,141,3513	1/1:2,20:22:45:707,45,0	0/0:20,0:20:57.20:0,57,1494
chr10	107388727	.	CACAG	C	2359.43	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.286;DP=687;FS=1.711;HRun=0;HaplotypeScore=128.4558;InbreedingCoeff=0.9550;MQ=60.09;MQ0=9;MQRankSum=-3.631;QD=23.13;ReadPosRankSum=-2.290;VQSLOD=3.0524;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:99:0,110,2751	0/0:3,0:3:8.99:0,9,167	0/0:23,0:7:14.08:0,14,263	0/0:29,0:13:28.49:0,28,340	0/0:16,0:16:35.90:0,36,777	0/0:19,0:19:45.15:0,45,1103	0/0:26,0:26:74.60:0,75,1678	1/1:3,27:30:61.88:1186,62,0	0/0:38,0:38:99:0,111,2334	0/0:34,0:34:88.20:0,88,2083	0/0:13,0:13:27.04:0,27,539	0/0:30,0:30:42.99:0,43,868	0/0:20,0:20:53.24:0,53,1181	0/0:14,0:14:36.12:0,36,898	0/0:38,0:38:57.32:0,57,2250	0/0:34,0:33:90.25:0,90,1956	0/0:34,0:34:77.15:0,77,1862	0/0:24,0:24:69.21:0,69,1560	1/1:3,8:10:27.09:468,27,0	1/1:6,8:14:5.95:71,6,0	1/1:27,7:33:29.75:438,30,0	0/0:18,0:18:50.53:0,51,1045	0/0:11,0:11:30.57:0,31,684	0/0:32,0:32:93.30:0,93,2193	0/0:25,0:25:43.85:0,44,1426	0/0:36,0:34:93.18:0,93,2195	1/1:5,8:13:21.07:366,21,0	0/0:24,0:24:60.16:0,60,1275
chr10	107388729	.	CAG	C	1294.85	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.642;DP=687;FS=0.000;HRun=0;HaplotypeScore=108.5967;InbreedingCoeff=0.8957;MQ=59.96;MQ0=10;MQRankSum=-1.991;QD=12.69;ReadPosRankSum=-1.963;VQSLOD=3.2137;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:88.95:0,89,1820	0/0:4,0:4:11.99:0,12,157	0/0:22,0:7:2.21:0,2,154	0/0:29,0:13:16.30:0,16,211	0/0:17,0:16:38.17:0,38,551	0/0:18,0:18:44.98:0,45,746	0/0:25,0:25:74.45:0,74,1122	1/1:30,0:30:57.28:675,57,0	0/0:39,0:39:99:0,113,1524	0/0:34,0:34:85.88:0,86,1396	0/0:12,0:12:27.02:0,27,376	0/0:29,0:29:45.03:0,45,601	0/0:21,0:21:55.82:0,56,770	0/0:16,0:16:42.11:0,42,674	0/0:37,0:37:65.84:0,66,1542	0/0:33,0:32:90.02:0,90,1361	0/0:35,0:35:77.73:0,78,1295	0/0:25,0:25:71.74:0,72,1091	1/1:10,1:10:26.98:270,27,0	1/1:10,5:15:4.25:31,4,0	1/1:30,3:32:29.52:267,30,0	0/0:19,0:19:38.23:0,38,682	0/0:11,0:11:8.14:0,8,457	0/0:31,0:31:92.74:0,93,1430	0/0:25,0:25:63.26:0,63,1049	0/0:37,0:35:99:0,100,1582	1/1:8,5:13:21.04:218,21,0	0/0:22,0:22:60.03:0,60,913
chr10	107388733	.	CACAGAGAGAGAGAG	C	967.60	PASS	AB=0.875;AC=10;AF=0.179;AN=56;BaseQRankSum=11.066;DP=690;FS=4.333;HRun=0;HaplotypeScore=256.8589;InbreedingCoeff=0.7270;MQ=58.27;MQ0=12;MQRankSum=-1.792;QD=8.13;ReadPosRankSum=-1.815;VQSLOD=2.3063;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:99:0,122,6477	0/0:4,0:4:12.01:0,12,278	0/1:19,0:6:19.70:20,0,65	0/0:27,0:12:9.52:0,10,92	0/0:23,0:20:47.23:0,47,1983	0/0:18,0:18:44.98:0,45,1779	0/0:25,0:25:72.11:0,72,2268	1/1:28,0:28:30.09:237,30,0	0/0:37,0:37:99:0,108,3037	0/0:36,0:36:98.42:0,98,2959	0/0:10,0:10:21.02:0,21,657	0/0:31,0:31:38.91:0,39,817	0/0:22,0:22:63.01:0,63,2035	0/0:15,0:15:42.08:0,42,1736	0/0:36,0:36:99:0,101,4281	0/0:32,0:31:81.12:0,81,3359	0/0:31,0:31:81.97:0,82,2860	0/0:25,0:25:72.11:0,72,2778	1/1:10,1:11:6.22:240,6,0	0/1:10,4:15:7.98:105,0,8	1/1:29,1:31:14.38:60,14,0	0/0:19,0:19:48.50:0,48,1422	0/0:13,0:13:38.99:0,39,1209	0/0:31,0:31:90.17:0,90,4158	0/0:26,0:26:66.14:0,66,2519	0/0:41,0:39:99:0,106,2998	1/1:9,4:14:23.67:468,24,0	0/0:22,0:22:59.96:0,60,1730
chr10	107388735	.	CAG	C	420.83	PASS	AB=0.924;AC=22;AF=0.423;AN=52;BaseQRankSum=7.272;DP=697;FS=2.125;HRun=0;HaplotypeScore=112.0426;InbreedingCoeff=-0.2574;MQ=57.85;MQ0=14;MQRankSum=0.094;QD=0.89;ReadPosRankSum=-0.189;VQSLOD=2.1974;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:45,2:45:35.30:35,0,844	0/0:5,0:5:5.97:0,6,62	0/0:22,0:7:2.90:0,3,16	./.	0/0:20,3:20:2.78:0,3,389	0/1:18,2:20:5.88:6,0,290	0/1:22,3:25:47.36:47,0,158	./.	0/1:33,5:39:99:148,0,227	0/1:28,3:31:39.56:40,0,288	0/0:9,0:9:6.02:0,6,90	0/0:19,0:32:6.83:0,7,51	0/1:18,4:22:71.72:72,0,228	0/0:16,0:16:24.05:0,24,318	0/1:35,2:37:32.52:33,0,658	0/1:26,5:30:33.83:34,0,493	0/0:29,1:31:3.94:0,4,491	0/0:24,1:25:8.91:0,9,478	1/1:11,0:11:2.84:14,3,0	1/1:14,0:14:2.84:14,3,0	1/1:29,0:28:0.45:2,0,0	0/1:20,1:21:9.05:9,0,219	0/1:13,0:13:4.96:5,0,193	0/1:29,2:31:13.35:13,0,531	0/1:21,2:24:14.02:14,0,351	0/1:43,0:41:4.78:5,0,457	1/1:14,0:14:11.51:65,12,0	0/1:20,2:22:8.88:9,0,267
chr10	107389671	.	G	GGCAGGGTCCTCA	7721.04	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.243;DP=430;FS=6.173;HRun=0;HaplotypeScore=145.5276;InbreedingCoeff=0.9405;MQ=90.47;MQ0=0;MQRankSum=-8.937;QD=91.92;ReadPosRankSum=-2.652;VQSLOD=4.1464;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.12:0,66,2439	0/0:4,0:4:12.04:0,12,405	0/0:17,0:17:51.11:0,51,1595	0/0:21,0:21:52.59:0,53,1828	0/0:12,0:12:33.11:0,33,1292	0/0:18,0:18:51.18:0,51,2019	0/0:20,0:20:60.21:0,60,2164	1/1:10,1:25:72.22:3355,72,0	0/0:14,0:14:39.11:0,39,1383	0/0:11,0:11:33.11:0,33,1106	0/0:3,0:3:9.03:0,9,342	0/0:22,0:22:63.21:0,63,2367	0/0:15,0:15:45.15:0,45,1769	0/0:13,0:13:39.13:0,39,1489	0/0:14,0:14:42.14:0,42,1618	0/0:8,0:8:24.08:0,24,883	0/0:27,0:27:78.15:0,78,2692	0/0:21,0:21:63.22:0,63,2395	1/1:5,1:10:21.01:662,21,0	1/1:5,3:12:15.05:918,15,0	1/1:7,6:26:18.04:966,18,0	0/0:3,0:3:6.02:0,6,236	0/0:4,0:4:12.04:0,12,393	0/0:38,0:38:99:0,114,4350	0/0:15,0:14:42.14:0,42,1649	0/0:17,0:17:51.13:0,51,1818	1/1:3,7:11:33.11:1820,33,0	0/0:6,0:6:18.03:0,18,614
chr10	107389781	.	TCTCC	T	2227.75	PASS	AB=0.957;AC=15;AF=0.268;AN=56;BaseQRankSum=9.742;DP=423;FS=2.033;HRun=0;HaplotypeScore=89.6787;InbreedingCoeff=0.7852;MQ=75.83;MQ0=2;MQRankSum=-2.052;QD=15.69;ReadPosRankSum=-0.503;VQSLOD=3.3905;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:37.37:0,37,846	1/1:5,6:11:15.05:242,15,0	1/1:16,0:10:2.02:11,2,0	0/1:21,1:18:33.27:33,0,228	0/0:14,0:14:15.05:0,15,362	0/0:14,0:14:24.08:0,24,555	0/0:12,0:12:18.03:0,18,318	1/1:23,0:23:6.02:97,6,0	0/0:7,0:7:9.03:0,9,217	0/0:13,0:13:21.07:0,21,507	0/0:8,0:8:15.05:0,15,361	1/1:25,0:25:69.24:1114,69,0	0/0:14,0:14:18.06:0,18,435	0/0:8,0:8:15.05:0,15,337	0/0:17,0:17:30.10:0,30,669	0/0:21,0:21:36.12:0,36,844	0/0:12,0:12:27.09:0,27,598	0/0:12,0:12:18.27:0,18,348	1/1:12,0:12:8.98:95,9,0	1/1:16,0:16:21.06:315,21,0	0/0:23,0:23:0.47:0,0,1	0/0:10,0:10:16.30:0,16,362	0/0:12,0:12:21.07:0,21,507	0/0:17,0:17:21.05:0,21,459	0/0:11,0:11:12.04:0,12,282	0/0:11,0:11:21.07:0,21,506	1/1:17,0:17:33.10:503,33,0	0/0:16,0:16:31.31:0,31,584
chr10	107389795	.	TCCC	T	623.02	PASS	AB=0.886;AC=7;AF=0.125;AN=56;BaseQRankSum=10.008;DP=418;FS=0.000;HRun=3;HaplotypeScore=86.5530;InbreedingCoeff=-0.1053;MQ=60.54;MQ0=3;MQRankSum=-2.282;QD=5.66;ReadPosRankSum=4.613;VQSLOD=-0.6701;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:72.16:0,72,1305	0/1:9,0:9:29.03:29,0,59	0/0:15,0:7:13.93:0,14,131	0/1:16,0:10:11.25:11,0,343	0/0:15,0:15:42.06:0,42,716	0/0:14,0:14:42.11:0,42,794	0/0:15,0:15:45.14:0,45,757	0/1:12,2:14:54.77:65,0,55	0/0:7,0:7:21.06:0,21,363	0/0:16,0:16:42.12:0,42,764	0/0:11,0:11:27.09:0,27,560	0/1:30,0:30:92.15:146,0,92	0/0:14,0:14:39.13:0,39,751	0/0:8,0:8:24.06:0,24,467	0/0:16,0:16:45.11:0,45,856	0/0:22,0:22:63.15:0,63,1189	0/0:15,0:15:45.08:0,45,852	0/0:12,0:12:33.96:0,34,622	0/1:6,0:6:7.68:50,0,8	0/1:8,7:15:35.26:183,0,35	0/0:20,2:22:5.53:0,6,120	0/0:11,0:11:28.30:0,28,486	0/0:11,0:11:33.08:0,33,639	0/0:17,0:17:47.98:0,48,783	0/0:11,0:11:30.02:0,30,493	0/0:14,0:14:42.12:0,42,762	0/1:9,11:20:63.30:268,0,63	0/0:14,0:14:42.14:0,42,860
chr10	107389803	.	TC	T	256.60	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.709;DP=400;FS=4.004;HRun=3;HaplotypeScore=73.6461;InbreedingCoeff=0.7647;MQ=62.00;MQ0=3;MQRankSum=0.411;QD=9.16;ReadPosRankSum=3.757;VQSLOD=1.4268;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:58.76:0,59,844	0/0:8,0:8:4.78:0,5,66	0/0:14,0:7:16.60:0,17,198	0/0:19,0:14:33:0,33,412	0/0:11,0:11:27.09:0,27,383	0/0:14,0:14:39.13:0,39,549	0/0:17,0:17:48.16:0,48,664	0/0:18,0:18:28.14:0,28,354	0/0:7,0:7:18.06:0,18,251	0/0:13,0:13:34.36:0,34,468	0/0:12,0:12:30.10:0,30,422	1/1:7,21:28:11.11:342,11,0	0/0:13,0:13:36.05:0,36,466	0/0:8,0:8:24.07:0,24,320	0/0:15,0:15:45.10:0,45,597	0/0:20,0:20:52.93:0,53,685	0/0:15,0:15:42.61:0,43,592	0/0:12,0:12:33.58:0,34,465	0/0:6,0:6:7.70:0,8,86	0/0:14,0:14:19.10:0,19,235	0/0:21,0:21:42.46:0,42,517	0/0:10,0:10:24.54:0,25,325	0/0:11,0:11:30.10:0,30,424	0/0:12,0:12:33.11:0,33,464	0/0:9,0:9:24.07:0,24,320	0/0:13,0:13:39.13:0,39,545	0/0:19,0:19:23.16:0,23,289	0/0:14,0:14:38.76:0,39,499
chr10	107390700	.	GC	G	1595.62	PASS	AB=0.800;AC=13;AF=0.232;AN=56;BaseQRankSum=10.424;DP=419;FS=0.974;HRun=10;HaplotypeScore=57.1722;InbreedingCoeff=0.7400;MQ=79.77;MQ0=1;MQRankSum=-1.569;QD=14.00;ReadPosRankSum=0.355;VQSLOD=3.5644;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:60.07:0,60,624	0/1:2,1:4:14.26:14,0,45	0/0:22,0:20:3.05:0,3,262	0/0:19,0:19:8.45:0,8,208	0/0:7,0:7:15.04:0,15,165	0/0:17,2:20:21.94:0,22,434	0/0:14,1:15:6.99:0,7,306	1/1:6,13:19:38.97:339,39,0	0/0:14,0:14:30.08:0,30,332	0/0:13,0:13:26.99:0,27,278	0/0:3,0:3:3.01:0,3,33	1/1:5,0:21:32.59:96,33,0	0/0:8,0:8:18.05:0,18,199	0/0:13,1:14:1.02:0,1,230	0/0:19,0:19:48.13:0,48,531	0/0:19,0:19:39.07:0,39,407	0/0:21,1:22:19.07:0,19,439	0/0:22,0:22:57.09:0,57,599	1/1:4,6:11:20.03:162,20,0	1/1:1,8:9:17.99:156,18,0	1/1:2,31:33:83.98:729,84,0	0/0:7,1:8:18.04:0,18,192	0/0:8,0:8:12.50:0,13,133	0/0:10,0:10:27.07:0,27,299	0/0:10,0:10:21.06:0,21,232	0/0:14,0:14:33.09:0,33,365	1/1:3,13:16:5.88:279,6,0	0/0:7,0:7:15.04:0,15,166
chr10	107391816	.	T	TC	5693.07	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-13.781;DP=742;FS=2.945;HRun=3;HaplotypeScore=80.3701;InbreedingCoeff=0.9949;MQ=88.81;MQ0=0;MQRankSum=-2.136;QD=36.49;ReadPosRankSum=-1.022;VQSLOD=4.9384;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,159,1907	0/0:10,0:10:30.09:0,30,360	0/0:29,0:30:29.67:0,30,699	0/0:29,0:30:19.95:0,20,607	0/0:25,0:25:69.21:0,69,827	0/0:31,0:31:90.28:0,90,1079	0/0:24,0:24:72.19:0,72,840	1/1:3,26:29:75.25:1040,75,0	0/0:23,0:23:66.19:0,66,780	0/0:27,0:27:81.25:0,81,972	0/0:20,0:20:60.18:0,60,720	0/0:33,0:33:96.27:0,96,1129	0/0:18,0:18:51.16:0,51,612	0/0:15,0:15:42.12:0,42,493	0/0:26,0:26:72.22:0,72,864	0/0:20,0:20:51.16:0,51,612	0/0:32,0:32:90.25:0,90,1066	0/0:23,0:23:60.11:0,60,689	1/1:1,21:22:63.21:876,63,0	1/1:1,26:27:69.23:966,69,0	1/1:2,44:46:99:1638,117,0	0/0:17,0:17:51.16:0,51,612	0/0:19,1:20:15.18:0,15,595	0/0:42,0:42:99:0,120,1427	0/0:19,0:19:48.13:0,48,564	0/0:34,0:34:93.29:0,93,1115	1/1:0,32:32:84.28:1173,84,0	0/0:12,0:12:33.10:0,33,395
chr10	107392856	.	A	ATGTG	6919.51	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-12.492;DP=873;FS=21.195;HRun=0;HaplotypeScore=141.4080;InbreedingCoeff=0.9899;MQ=54.79;MQ0=35;MQRankSum=-2.556;QD=35.30;ReadPosRankSum=-3.042;VQSLOD=2.9232;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:73.91:0,74,1664	0/0:5,0:5:12.04:0,12,210	0/0:58,0:12:18.02:0,18,314	0/0:54,0:16:41.88:0,42,611	0/0:22,0:22:57.17:0,57,969	0/0:28,0:27:69.11:0,69,1172	0/0:30,0:30:81.22:0,81,1307	1/1:13,32:44:93.26:1759,93,0	0/0:28,0:28:73.83:0,74,1269	0/0:37,0:35:99:0,99,1662	0/0:8,0:8:24.08:0,24,403	0/0:37,0:37:90.27:0,90,1463	0/0:27,0:26:59.84:0,60,939	0/0:36,0:35:80.02:0,80,1244	0/0:23,0:23:60.18:0,60,1005	0/0:24,0:23:66.23:0,66,1132	0/0:53,0:53:99:0,143,2389	0/0:17,0:17:43.99:0,44,751	1/1:14,13:23:40.04:628,40,0	1/1:1,20:21:24.08:599,24,0	1/1:12,51:64:99:2463,99,0	0/0:19,0:19:54.18:0,54,941	0/0:15,0:15:45.15:0,45,782	0/0:50,0:50:99:0,126,2121	0/0:17,0:17:36.12:0,36,626	0/0:30,0:29:78.12:0,78,1269	1/1:10,21:31:60.16:1470,60,0	0/0:13,0:13:33.11:0,33,569
chr10	107392924	.	A	AAG	570.59	PASS	AB=0.948;AC=16;AF=0.320;AN=50;BaseQRankSum=0.218;DP=708;FS=8.399;HRun=0;HaplotypeScore=132.2314;InbreedingCoeff=0.3068;MQ=53.76;MQ0=19;MQRankSum=2.920;QD=2.19;ReadPosRankSum=-2.046;VQSLOD=0.9155;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:36:26.50:170,0,26	1/1:10,0:10:2.87:15,3,0	./.	./.	0/1:22,0:22:1.47:1,0,56	0/1:32,1:33:57.67:58,0,172	0/0:36,0:36:6.28:0,6,380	1/1:27,0:25:1.83:4,2,0	0/1:14,9:22:29.74:30,0,95	0/0:36,0:35:34.56:0,35,326	0/0:10,0:10:6.02:0,6,65	0/0:37,0:37:5.80:0,6,33	0/0:20,0:20:15.90:0,16,155	0/0:26,0:26:27.35:0,27,245	0/0:25,0:23:27.10:0,27,234	1/1:22,2:32:16.53:188,17,0	0/0:32,0:31:35.98:0,36,358	0/0:16,0:19:2.73:0,3,110	./.	1/1:22,0:22:5.31:33,5,0	1/1:26,0:26:17.38:159,17,0	0/0:26,0:27:26.86:0,27,259	0/0:19,0:17:18.04:0,18,189	0/0:46,0:47:43.80:0,44,394	0/1:17,0:16:44.93:60,0,45	0/0:24,0:24:29.30:0,29,229	0/0:27,0:27:18.40:0,18,88	0/1:12,0:10:5.39:5,0,27
chr10	107392954	.	GAGAGAGAGAGAGAT	G	684.68	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=0.832;DP=711;FS=8.050;HRun=0;HaplotypeScore=255.9488;InbreedingCoeff=0.1583;MQ=57.78;MQ0=19;MQRankSum=-1.019;QD=4.89;ReadPosRankSum=-3.739;VQSLOD=0.9187;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:81.78:0,82,2404	0/1:10,0:10:12.81:98,0,13	0/0:29,0:11:8.80:0,9,196	0/0:32,0:14:36.14:0,36,377	0/0:23,0:22:57.43:0,57,1316	0/0:28,0:28:65.73:0,66,2340	0/0:36,0:36:93.21:0,93,3521	0/1:31,0:29:99:175,0,390	0/0:25,0:24:48.03:0,48,1292	0/0:39,0:38:99:0,114,4109	0/0:10,0:10:18.03:0,18,540	1/1:8,22:30:21.04:389,21,0	0/0:23,0:23:60.15:0,60,1856	0/0:22,0:20:51.09:0,51,2036	0/0:27,0:26:63.58:0,64,2105	0/0:27,0:27:39.58:0,40,1484	0/0:27,0:25:66.12:0,66,2290	0/0:20,0:17:45.11:0,45,1556	0/1:12,0:10:47.52:48,0,186	0/0:19,0:19:0.73:0,1,475	0/1:28,0:28:39.90:40,0,796	0/0:21,0:21:54.14:0,54,2152	0/0:20,0:20:44.60:0,45,1526	0/0:41,0:41:92.39:0,92,3745	0/0:18,0:18:45.82:0,46,1248	0/0:26,0:26:76.73:0,77,2456	0/1:29,0:29:70.83:71,0,1331	0/0:18,0:15:45:0,45,772
chr10	107392956	.	GAGAGAGAGAGAT	G	818.22	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-0.413;DP=714;FS=3.856;HRun=0;HaplotypeScore=235.5300;InbreedingCoeff=0.3555;MQ=59.17;MQ0=16;MQRankSum=-0.623;QD=5.35;ReadPosRankSum=-3.691;VQSLOD=1.7087;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:80.66:0,81,2086	1/1:1,9:10:11.72:240,12,0	0/0:32,0:14:21.57:0,22,290	0/0:33,0:16:42.13:0,42,419	0/0:23,0:22:53.94:0,54,1150	0/0:30,0:30:71.71:0,72,2097	0/0:37,0:37:96.16:0,96,3112	0/1:31,0:28:99:226,0,257	0/0:25,0:24:48:0,48,1124	0/0:38,0:37:99:0,111,3555	0/0:9,0:9:18.03:0,18,489	1/1:23,0:23:15.34:208,15,0	0/0:23,0:23:60.15:0,60,1687	0/0:21,0:20:48.11:0,48,1812	0/0:27,0:26:63.58:0,64,1874	0/0:31,0:31:51.55:0,52,1354	0/0:27,0:25:66.09:0,66,2026	0/0:18,0:16:42.13:0,42,1256	0/1:13,0:11:69.99:70,0,131	0/1:18,0:18:0.06:0,0,377	0/1:29,0:29:99:123,0,630	0/0:20,0:20:51.13:0,51,1863	0/0:22,0:22:50.58:0,51,1410	0/0:40,0:40:93.73:0,94,3314	0/0:18,0:18:45.35:0,45,1093	0/0:28,0:28:82.31:0,82,2128	0/1:29,0:29:94.03:94,0,1003	0/0:21,0:18:47.96:0,48,688
chr10	107393357	.	A	AC	5602.20	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-8.527;DP=676;FS=6.735;HRun=5;HaplotypeScore=71.8395;InbreedingCoeff=0.9993;MQ=73.68;MQ0=0;MQRankSum=1.038;QD=31.12;ReadPosRankSum=-2.022;VQSLOD=4.6083;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.19:0,84,893	1/1:2,9:11:24.08:310,24,0	0/0:27,0:25:45.65:0,46,565	0/0:25,0:23:50.16:0,50,520	0/0:14,0:14:36.08:0,36,383	0/0:22,0:22:66.14:0,66,700	0/0:23,0:23:54.11:0,54,571	1/1:12,29:41:84.22:1056,84,0	0/0:21,0:21:60.15:0,60,645	0/0:18,0:18:50.99:0,51,543	0/0:13,0:13:39.10:0,39,418	1/1:3,23:26:60.20:790,60,0	0/0:11,0:11:33.08:0,33,354	0/0:33,0:33:93.21:0,93,983	0/0:37,0:37:99:0,108,1143	0/0:36,0:36:99:0,105,1121	0/0:29,0:29:78.17:0,78,827	0/0:32,0:32:81.18:0,81,861	1/1:3,28:31:84.26:1092,84,0	1/1:1,17:18:48.16:627,48,0	1/1:1,34:35:90.29:1182,90,0	0/0:19,0:19:57.14:0,57,611	0/0:11,0:11:30.07:0,30,322	0/0:25,0:25:69.17:0,69,742	0/0:14,0:14:30.07:0,30,322	0/0:33,0:33:96.24:0,96,1026	1/1:1,17:17:42.13:546,42,0	0/0:22,0:22:63.16:0,63,677
chr10	107394667	.	C	CA	1935.98	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.884;DP=576;FS=0.937;HRun=0;HaplotypeScore=89.8532;InbreedingCoeff=0.9819;MQ=78.07;MQ0=0;MQRankSum=-12.243;QD=24.82;ReadPosRankSum=-0.689;VQSLOD=4.2374;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,141,1951	1/1:1,3:4:9.01:81,9,0	0/0:17,0:17:51.13:0,51,666	0/0:23,0:23:59.32:0,59,721	0/0:32,0:31:90.26:0,90,1218	0/0:23,0:23:69.21:0,69,946	0/0:27,0:27:78.26:0,78,1090	1/1:0,13:16:48.09:478,48,0	0/0:18,0:18:54.18:0,54,754	0/0:20,0:20:60.20:0,60,826	0/0:10,0:10:30.10:0,30,420	1/1:0,12:12:36.01:322,36,0	0/0:23,0:23:69.23:0,69,965	0/0:18,0:18:54.16:0,54,737	0/0:34,0:34:99:0,102,1391	0/0:24,0:24:69.23:0,69,965	0/0:25,0:25:75.23:0,75,1030	0/0:25,0:25:75.25:0,75,1049	1/1:1,3:4:11.94:104,12,0	1/1:1,12:13:39.04:370,39,0	1/1:1,11:12:36.01:321,36,0	0/0:27,0:27:81.26:0,81,1114	0/0:14,0:14:39.12:0,39,523	0/0:22,0:22:66.20:0,66,900	0/0:22,0:22:66.22:0,66,923	0/0:38,0:38:99:0,114,1580	1/1:1,16:17:49.85:454,50,0	0/0:6,0:6:18.06:0,18,252
chr10	107394669	.	C	CAGAA	6277.64	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.853;DP=591;FS=1.848;HRun=0;HaplotypeScore=120.6744;InbreedingCoeff=0.9898;MQ=77.02;MQ0=0;MQRankSum=-13.869;QD=64.72;ReadPosRankSum=-2.488;VQSLOD=5.6246;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,2966	1/1:1,3:4:12.03:231,12,0	0/0:17,0:17:48.16:0,48,963	0/0:23,0:23:60.10:0,60,1041	0/0:31,0:30:87.30:0,87,1802	0/0:23,0:23:69.21:0,69,1371	0/0:28,0:28:81.25:0,81,1607	1/1:11,13:24:69.51:1509,70,0	0/0:17,0:17:51.18:0,51,1057	0/0:20,0:20:60.20:0,60,1225	0/0:10,0:10:30.10:0,30,629	1/1:2,12:14:42.14:927,42,0	0/0:23,0:23:69.24:0,69,1447	0/0:18,0:18:51.18:0,51,1055	0/0:34,0:34:99:0,99,1999	0/0:23,0:23:69.24:0,69,1402	0/0:25,0:25:72.25:0,72,1510	0/0:25,0:25:75.21:0,75,1529	1/1:2,3:5:15.04:295,15,0	1/1:5,12:17:49.41:1100,49,0	1/1:3,11:14:39.13:859,39,0	0/0:26,0:26:78.27:0,78,1585	0/0:14,0:14:36.12:0,36,754	0/0:23,0:23:66.23:0,66,1383	0/0:22,0:22:66.21:0,66,1346	0/0:37,0:37:99:0,111,2329	1/1:3,16:19:57.20:1357,57,0	0/0:6,0:6:18.06:0,18,377
chr10	107395524	.	TGAGGAGCCCC	T	1942.85	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.323;DP=613;FS=5.617;HRun=0;HaplotypeScore=179.2747;InbreedingCoeff=0.9988;MQ=88.54;MQ0=0;MQRankSum=-7.870;QD=71.96;ReadPosRankSum=1.061;VQSLOD=3.1478;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,5598	0/0:10,0:10:30.09:0,30,1439	0/0:24,0:24:60.20:0,60,2355	0/0:23,0:23:65.03:0,65,2577	0/0:19,0:19:54.19:0,54,2806	0/0:24,0:24:69.24:0,69,3566	0/0:21,0:21:54.19:0,54,2630	0/0:27,0:27:75.26:0,75,3749	0/0:15,0:15:45.15:0,45,2252	0/0:17,0:17:45.15:0,45,2344	0/0:22,0:22:56.55:0,57,2935	1/1:0,27:27:63.69:2038,64,0	0/0:16,0:16:45.15:0,45,2113	0/0:24,0:24:72.25:0,72,3698	0/0:24,0:24:69.24:0,69,3453	0/0:26,0:26:72.25:0,72,3659	0/0:26,0:26:72.25:0,72,3762	0/0:20,0:20:57.20:0,57,2631	0/0:14,0:14:39.08:0,39,1549	0/0:20,0:20:60.21:0,60,3089	0/0:37,0:37:99:0,105,4988	0/0:16,0:16:48.16:0,48,2198	0/0:21,0:21:60.21:0,60,2890	0/0:26,0:26:66.23:0,66,3203	0/0:15,0:15:39.13:0,39,1927	0/0:31,0:31:84.29:0,84,4204	0/0:17,0:17:51.17:0,51,2492	0/0:10,0:10:30.09:0,30,1438
chr10	107396198	.	ACCC	A	550.68	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=5.525;DP=295;FS=3.990;HRun=12;HaplotypeScore=52.5444;InbreedingCoeff=0.4765;MQ=66.84;MQ0=0;MQRankSum=-3.005;QD=19.67;ReadPosRankSum=4.424;VQSLOD=1.6746;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:11:12.94:0,13,144	0/0:7,0:7:12.04:0,12,176	0/0:10,0:8:21.04:0,21,272	0/0:9,0:7:17.72:0,18,203	0/0:2,0:2:6.02:0,6,104	0/0:7,0:7:0.94:0,1,2	0/0:27,0:26:42.10:0,42,624	0/0:5,0:5:2.97:0,3,20	0/0:7,0:10:17.95:0,18,207	0/0:6,0:6:11.99:0,12,120	./.	1/1:5,23:28:50.90:644,51,0	0/0:11,0:10:15.02:0,15,193	0/0:10,0:10:18.05:0,18,257	0/0:10,0:9:11.99:0,12,168	0/0:7,0:8:18.03:0,18,231	0/0:19,0:21:48.49:0,48,605	0/0:15,0:17:30.85:0,31,407	0/0:18,0:19:33.02:0,33,381	0/0:1,0:1:3.01:0,3,51	0/0:18,0:18:31.30:0,31,442	0/0:4,0:5:3.94:0,4,28	0/0:3,0:4:6.19:0,6,84	0/0:15,0:17:26.98:0,27,348	0/0:11,0:11:17.12:0,17,253	0/0:7,0:7:6:0,6,69	0/0:11,0:11:11.57:0,12,136	./.
chr10	107397254	.	A	AT	1273.08	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.635;DP=623;FS=1.484;HRun=1;HaplotypeScore=59.5681;InbreedingCoeff=0.9851;MQ=88.02;MQ0=0;MQRankSum=-3.420;QD=39.78;ReadPosRankSum=-1.356;VQSLOD=3.6903;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,169,2164	1/1:0,7:7:21.07:315,21,0	0/0:22,0:21:63.18:0,63,783	0/0:29,0:29:81.25:0,81,1028	0/0:9,0:9:27.07:0,27,336	0/0:20,0:20:57.19:0,57,739	0/0:25,0:25:72.20:0,72,905	0/0:17,0:17:48.15:0,48,611	0/0:20,0:20:57.19:0,57,740	0/0:20,0:20:60.19:0,60,768	0/0:6,0:6:18.06:0,18,234	1/1:0,25:25:72.24:1079,72,0	0/0:21,0:21:63.20:0,63,818	0/0:23,0:23:69.22:0,69,896	0/0:22,0:22:66.20:0,66,843	0/0:16,0:16:48.16:0,48,623	0/0:40,0:40:99:0,117,1519	0/0:25,0:25:72.23:0,72,935	0/0:24,0:24:69.18:0,69,867	0/0:17,0:17:45.15:0,45,584	0/0:39,0:39:99:0,117,1519	0/0:12,0:12:36.10:0,36,453	0/0:14,0:14:39.13:0,39,506	0/0:51,0:51:99:0,141,1815	0/0:17,0:17:51.17:0,51,662	0/0:25,0:25:75.24:0,75,974	0/0:16,0:16:48.16:0,48,623	0/0:5,0:5:15.05:0,15,195
chr10	107398351	.	TG	T	1121.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.630;DP=731;FS=10.647;HRun=1;HaplotypeScore=69.3229;InbreedingCoeff=0.9843;MQ=83.21;MQ0=1;MQRankSum=-3.595;QD=36.16;ReadPosRankSum=1.485;VQSLOD=3.3322;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:99:0,120,1894	0/0:5,0:5:15.05:0,15,240	0/0:25,0:25:72.20:0,72,1091	0/0:17,0:17:45.06:0,45,595	0/0:24,0:24:69.24:0,69,1102	0/0:17,0:17:51.16:0,51,791	0/0:21,0:21:63.21:0,63,1007	0/0:30,0:29:90.30:0,90,1418	0/0:27,0:27:81.28:0,81,1293	0/0:36,0:36:99:0,105,1657	0/0:22,0:22:66.23:0,66,1055	1/1:0,31:31:87.29:1216,87,0	0/0:20,0:20:60.20:0,60,955	0/0:24,0:24:72.25:0,72,1151	0/0:34,0:34:99:0,102,1628	0/0:43,0:43:99:0,129,2020	0/0:29,0:29:87.30:0,87,1383	0/0:23,0:23:66.23:0,66,1055	0/0:20,0:20:57.19:0,57,893	0/0:20,0:20:57.17:0,57,864	0/0:44,0:44:99:0,129,2051	0/0:21,0:21:63.18:0,63,955	0/0:13,0:13:39.13:0,39,623	0/0:31,0:31:87.28:0,87,1366	0/0:31,0:31:90.27:0,90,1389	0/0:32,0:32:96.31:0,96,1492	0/0:38,0:37:99:0,114,1815	0/0:12,0:12:36.08:0,36,525
chr10	107398964	.	T	TC	1425.26	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-5.697;DP=325;FS=4.983;HRun=7;HaplotypeScore=45.2967;InbreedingCoeff=0.9741;MQ=76.15;MQ0=0;MQRankSum=0.312;QD=23.36;ReadPosRankSum=1.039;VQSLOD=3.5367;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:60.04:0,60,565	0/0:7,0:7:18.03:0,18,172	0/0:11,0:11:23.91:0,24,207	0/0:15,0:15:23.64:0,24,196	0/0:9,0:9:18.03:0,18,173	0/0:7,0:7:21.03:0,21,202	0/0:13,0:13:30.04:0,30,289	1/1:2,6:8:18.04:206,18,0	0/0:8,0:8:18.03:0,18,174	0/0:8,0:8:21.03:0,21,203	0/0:10,0:10:24.04:0,24,231	0/0:10,0:10:27.04:0,27,261	0/0:7,0:7:21.03:0,21,202	0/0:10,0:10:30.05:0,30,290	0/0:17,0:17:48.07:0,48,463	0/0:16,0:16:45.07:0,45,434	0/0:16,0:16:45.07:0,45,434	0/0:9,0:9:21.03:0,21,203	1/1:1,7:8:21.02:234,21,0	1/1:0,8:8:24.07:290,24,0	1/1:2,23:25:45.14:544,45,0	0/0:12,0:12:33.01:0,33,305	0/0:4,0:4:12.02:0,12,116	0/0:16,0:15:42.06:0,42,404	0/0:9,0:9:27.04:0,27,260	0/0:16,0:16:45.04:0,45,432	1/1:1,11:11:27.08:326,27,0	0/0:8,0:8:15:0,15,139
chr10	107399269	.	A	AG	4080.92	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.489;DP=577;FS=0.000;HRun=6;HaplotypeScore=58.6989;InbreedingCoeff=0.9977;MQ=88.37;MQ0=0;MQRankSum=-1.938;QD=31.15;ReadPosRankSum=0.078;VQSLOD=3.9307;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,108,1101	0/0:8,0:8:18.04:0,18,184	0/0:18,0:18:48.01:0,48,453	0/0:27,0:25:61.79:0,62,575	0/0:23,0:23:54:0,54,517	0/0:18,0:18:51.12:0,51,520	0/0:20,0:20:39.08:0,39,398	1/1:1,21:22:60.12:710,60,0	0/0:13,0:13:30.07:0,30,306	0/0:22,0:22:63.13:0,63,637	0/0:15,0:15:39.02:0,39,373	1/1:4,21:25:57.18:717,57,0	0/0:15,0:15:42.10:0,42,428	0/0:18,0:18:42.08:0,42,425	0/0:20,0:20:60.13:0,60,606	0/0:16,0:16:42.09:0,42,428	0/0:30,0:30:90.20:0,90,918	0/0:31,0:31:78.12:0,78,778	1/1:2,20:22:63.15:760,63,0	1/1:1,17:18:42.07:508,42,0	1/1:2,24:26:52.94:744,53,0	0/0:11,0:11:27.06:0,27,275	0/0:12,0:12:36.07:0,36,362	0/0:30,0:30:84.14:0,84,840	0/0:9,0:9:27.02:0,27,264	0/0:34,0:34:90.18:0,90,908	1/1:0,18:17:51.16:642,51,0	0/0:14,0:14:36.08:0,36,367
chr10	107402330	.	G	GTA	88.73	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=3.490;DP=687;FS=2.131;HRun=0;HaplotypeScore=95.9316;InbreedingCoeff=0.6677;MQ=62.25;MQ0=20;MQRankSum=0.876;QD=4.03;ReadPosRankSum=2.198;VQSLOD=2.1996;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,108,1068	1/1:0,7:7:9.03:172,9,0	0/0:34,0:9:17.14:0,17,195	0/0:43,0:17:41.96:0,42,435	0/0:20,0:19:44.91:0,45,382	0/0:19,0:16:18.16:0,18,284	0/0:45,0:44:99:0,114,1066	0/0:27,0:26:71.54:0,72,576	0/0:19,0:19:47.87:0,48,522	0/0:16,0:16:22.38:0,22,356	0/0:18,0:18:41.89:0,42,470	0/0:25,0:25:34.84:0,35,343	0/0:35,0:34:95.74:0,96,895	0/0:17,0:16:47.97:0,48,476	0/0:27,0:26:9.49:0,9,509	0/0:17,0:17:51.01:0,51,558	0/0:28,0:28:56.21:0,56,754	0/0:27,0:27:75.02:0,75,841	0/0:17,0:18:50.81:0,51,439	0/1:15,0:15:0.81:1,0,117	0/0:49,0:48:40.64:0,41,489	0/0:17,0:17:38.42:0,38,333	0/0:15,0:12:23.04:0,23,239	0/0:33,0:32:95.80:0,96,886	0/0:9,0:9:20.98:0,21,176	0/0:39,0:38:99:0,114,1017	0/0:18,0:17:19.33:0,19,221	0/0:10,0:10:29.77:0,30,221
chr10	107402365	.	TCACACA	T	129.94	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=3.135;DP=664;FS=0.000;HRun=0;HaplotypeScore=127.1214;InbreedingCoeff=0.5973;MQ=62.33;MQ0=34;MQRankSum=-2.287;QD=1.67;ReadPosRankSum=-1.157;VQSLOD=1.5140;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,3221	0/0:8,0:8:21.07:0,21,733	0/1:59,0:11:7.34:7,0,704	0/0:51,0:10:19.75:0,20,384	0/0:18,0:16:33.11:0,33,1174	0/0:24,0:23:63.69:0,64,2212	0/0:43,0:43:99:0,114,3854	0/0:17,0:16:33.11:0,33,1116	0/0:26,0:26:78.27:0,78,2576	0/0:19,0:19:57.20:0,57,1884	0/0:13,0:13:36.12:0,36,1224	1/1:7,12:19:9.03:212,9,0	0/0:29,0:28:72.25:0,72,2303	0/0:15,0:14:42.14:0,42,1283	0/0:27,0:26:69.24:0,69,2365	0/0:19,0:19:57.20:0,57,1910	0/0:29,0:29:75.26:0,75,2495	0/0:27,0:27:78.27:0,78,2506	0/0:20,0:17:39.13:0,39,1325	0/0:13,0:13:24.05:0,24,772	0/0:32,0:30:60.20:0,60,1993	0/0:14,0:14:27.02:0,27,907	0/0:17,0:14:33.11:0,33,1054	0/0:29,0:29:81.28:0,81,2685	0/0:11,0:11:30.10:0,30,1067	0/0:28,0:27:81.28:0,81,2787	0/0:17,0:17:22.61:0,23,1161	0/0:3,0:3:9.03:0,9,302
chr10	107404122	.	CGT	C	947.86	PASS	AB=0.871;AC=23;AF=0.426;AN=54;BaseQRankSum=9.329;DP=819;FS=0.000;HRun=0;HaplotypeScore=136.3752;InbreedingCoeff=-0.2600;MQ=68.62;MQ0=2;MQRankSum=-1.959;QD=1.67;ReadPosRankSum=1.509;VQSLOD=2.0516;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,1:42:26.14:0,26,827	0/0:6,0:15:9.82:0,10,101	./.	0/0:26,0:19:3.01:0,3,36	0/1:14,4:18:75.11:75,0,208	0/1:15,6:20:99:122,0,285	0/1:27,2:29:16.94:17,0,639	0/1:29,0:34:54.60:75,0,55	0/1:33,1:34:1.16:1,0,821	0/0:43,0:43:51.97:0,52,998	0/0:14,0:14:1.73:0,2,214	1/1:22,0:37:2.25:8,2,0	0/0:23,2:25:11.03:0,11,545	0/1:25,2:28:22.96:23,0,502	0/0:32,3:36:4.11:0,4,903	0/1:28,3:31:32.97:33,0,808	0/1:38,3:42:56.65:57,0,833	0/1:25,8:33:99:226,0,420	1/1:19,0:27:5.49:60,5,0	0/1:11,0:22:7.38:7,0,27	1/1:45,0:48:4.43:52,4,0	0/1:25,2:27:3.97:4,0,363	0/1:18,2:20:66.21:66,0,372	0/1:32,1:37:24.37:24,0,695	0/0:20,2:22:2.07:0,2,472	0/1:38,3:42:99:119,0,512	1/1:10,0:17:11.27:54,11,0	0/1:15,3:18:77.18:77,0,375
chr10	107404595	.	TTG	T	5892.40	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.638;DP=1182;FS=2.155;HRun=0;HaplotypeScore=172.5368;InbreedingCoeff=0.9990;MQ=57.62;MQ0=5;MQRankSum=4.523;QD=26.42;ReadPosRankSum=-0.190;VQSLOD=5.2013;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:69,2:70:87.45:0,87,2381	0/0:11,0:11:33.11:0,33,534	0/0:49,0:28:39.83:0,40,542	0/0:67,0:47:47.74:0,48,874	0/0:30,0:30:54.18:0,54,861	0/0:29,0:29:75.25:0,75,1213	0/0:37,0:38:84.28:0,84,1319	1/1:16,32:47:99:1215,99,0	0/0:46,0:46:99:0,129,2068	0/0:62,0:62:99:0,154,2461	0/0:33,1:34:43.78:0,44,1205	0/0:64,0:64:99:0,160,2559	0/0:34,0:34:87.29:0,87,1398	0/0:40,0:40:99:0,99,1498	0/0:62,0:62:99:0,174,2700	0/0:33,0:33:93.32:0,93,1505	0/0:42,0:42:99:0,107,1732	0/0:29,0:28:71.52:0,72,1133	1/1:16,12:27:45.13:549,45,0	1/1:6,30:36:72.23:900,72,0	1/1:24,66:88:99:2665,203,0	0/0:44,0:44:79.44:0,79,1531	0/0:35,0:35:87.28:0,87,1401	0/0:43,0:43:99:0,105,1656	0/0:28,0:28:77.95:0,78,1284	0/0:53,2:55:99:0,102,2285	1/1:4,17:21:45.14:563,45,0	0/0:12,0:12:21.07:0,21,347
chr10	107407452	.	GT	G	5141.73	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.984;DP=661;FS=3.574;HRun=3;HaplotypeScore=62.1192;InbreedingCoeff=0.9998;MQ=84.96;MQ0=0;MQRankSum=-2.958;QD=35.22;ReadPosRankSum=2.158;VQSLOD=5.6235;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,150,2128	1/1:0,13:13:39.12:483,39,0	0/0:21,0:21:57.19:0,57,787	0/0:20,0:20:51.16:0,51,683	0/0:31,0:31:93.28:0,93,1296	0/0:20,0:20:54.15:0,54,755	0/0:23,0:23:60.20:0,60,864	1/1:1,21:22:60.17:730,60,0	0/0:16,0:16:48.16:0,48,686	0/0:25,0:25:72.23:0,72,1017	0/0:25,0:25:72.22:0,72,995	1/1:0,24:24:69.22:854,69,0	0/0:14,0:14:39.13:0,39,560	0/0:23,0:23:66.22:0,66,951	0/0:35,0:35:99:0,99,1407	0/0:16,0:16:45.15:0,45,644	0/0:31,0:31:90.27:0,90,1266	0/0:23,0:23:66.20:0,66,931	1/1:0,11:11:33.09:397,33,0	1/1:0,21:21:60.19:744,60,0	1/1:0,29:29:78.25:967,78,0	0/0:19,0:19:57.19:0,57,810	0/0:24,0:24:72.24:0,72,1036	0/0:34,0:34:99:0,102,1451	0/0:25,0:25:69.23:0,69,992	0/0:30,0:30:90.30:0,90,1291	1/1:0,26:26:78.25:967,78,0	0/0:10,0:10:30.10:0,30,432
chr10	107411828	.	G	GA	3233.06	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-10.823;DP=667;FS=10.429;HRun=9;HaplotypeScore=72.6943;InbreedingCoeff=0.9953;MQ=76.11;MQ0=2;MQRankSum=-1.711;QD=23.43;ReadPosRankSum=-2.563;VQSLOD=3.0685;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:45:86.45:0,86,812	1/1:0,10:10:27.07:299,27,0	0/0:25,0:22:47.91:0,48,401	0/0:22,0:23:17.71:0,18,262	0/0:26,0:27:74:0,74,626	0/0:24,0:24:68.97:0,69,595	0/0:24,0:24:65.91:0,66,561	1/1:4,22:26:68.82:717,69,0	0/0:20,1:21:20.80:0,21,409	0/0:26,0:26:65.95:0,66,569	0/0:17,0:17:41.99:0,42,365	0/0:31,0:31:86.96:0,87,751	0/0:14,0:14:35.98:0,36,312	0/0:27,0:27:74.98:0,75,651	0/0:30,0:30:86.98:0,87,755	0/0:29,0:29:77:0,77,657	0/0:24,0:24:39.83:0,40,474	0/0:20,0:21:61.95:0,62,512	1/1:7,19:27:62.97:665,63,0	1/1:5,18:23:23.24:471,23,0	1/1:3,17:20:48.13:531,48,0	0/0:17,0:17:35.99:0,36,312	0/0:21,0:21:56.97:0,57,490	0/0:18,0:18:19.25:0,19,316	0/0:23,0:24:62.01:0,62,523	0/0:18,0:18:41.98:0,42,365	1/1:7,25:31:46.14:737,46,0	0/0:21,0:21:59.99:0,60,521
chr10	107412320	.	CGTGTGCGTGT	C	178.32	PASS	AB=1.000;AC=8;AF=0.154;AN=52;BaseQRankSum=6.298;DP=592;FS=4.942;HRun=0;HaplotypeScore=178.6569;InbreedingCoeff=0.2925;MQ=54.19;MQ0=20;MQRankSum=-0.293;QD=1.37;ReadPosRankSum=-0.513;VQSLOD=2.3091;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:80.52:0,81,2180	1/1:3,5:8:1.25:88,1,0	./.	./.	0/0:13,0:13:24.02:0,24,584	0/0:19,0:19:38.95:0,39,1089	0/0:30,0:29:57.12:0,57,1187	0/1:18,0:15:26.90:52,0,27	0/0:26,0:25:54.17:0,54,1930	0/0:20,0:17:30.06:0,30,883	0/0:10,0:10:15.05:0,15,597	0/0:18,0:16:20.45:0,20,201	0/0:16,0:16:42.14:0,42,1376	0/0:23,0:23:63.22:0,63,2511	0/0:15,0:15:42.07:0,42,1293	0/0:15,0:15:42.05:0,42,922	0/0:46,0:46:99:0,102,3464	0/0:38,0:37:87.12:0,87,2305	0/1:15,0:14:21.07:21,0,22	1/1:6,0:6:2.97:20,3,0	0/1:65,0:60:3.32:77,0,3	0/0:10,0:9:18.01:0,18,192	0/0:9,0:9:24.07:0,24,750	0/0:41,0:41:87.21:0,87,2827	0/0:12,0:12:27.08:0,27,992	0/0:20,0:19:42.09:0,42,656	0/1:18,0:18:44.65:45,0,59	0/0:4,0:3:6.02:0,6,224
chr10	107412348	.	TGTGC	T	175.61	PASS	AB=0.939;AC=5;AF=0.089;AN=56;BaseQRankSum=6.201;DP=610;FS=0.000;HRun=0;HaplotypeScore=107.1987;InbreedingCoeff=0.0644;MQ=50.03;MQ0=32;MQRankSum=-3.314;QD=1.48;ReadPosRankSum=-0.081;VQSLOD=1.9697;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:96.26:0,96,2163	0/1:7,0:7:2.41:2,0,37	0/0:30,1:6:14.72:0,15,209	0/0:46,0:7:14.82:0,15,210	0/0:8,0:8:15.02:0,15,333	0/0:19,0:19:47.94:0,48,1047	0/0:27,0:26:60.17:0,60,1279	0/0:20,0:13:11.88:0,12,151	0/0:25,0:23:69.02:0,69,1495	0/0:16,0:15:42.13:0,42,866	0/0:8,0:8:21.07:0,21,545	0/1:18,0:17:37.41:37,0,211	0/0:21,0:20:57.10:0,57,1220	0/0:25,0:25:69.18:0,69,1665	0/0:14,0:14:39.13:0,39,946	0/0:14,0:13:27.06:0,27,620	0/0:44,0:42:99:0,114,2547	0/0:35,0:35:81.19:0,81,1896	0/1:13,0:11:1.21:52,0,1	0/0:6,2:8:3.01:0,3,33	0/1:62,4:57:8.62:9,0,83	0/0:6,0:5:8.96:0,9,120	0/0:9,0:9:27.09:0,27,644	0/0:37,0:36:93.30:0,93,2253	0/0:14,0:14:36.12:0,36,899	0/0:17,0:16:41.98:0,42,828	0/1:10,5:15:19.47:182,0,19	0/0:7,0:6:15.05:0,15,358
chr10	107412363	.	GTGCGTGTGCGTGCGTGTA	G	1828.66	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=7.558;DP=618;FS=17.107;HRun=0;HaplotypeScore=220.9285;InbreedingCoeff=0.4068;MQ=50.63;MQ0=36;MQRankSum=-3.974;QD=14.40;ReadPosRankSum=-3.015;VQSLOD=0.2691;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:93.28:0,93,4242	0/0:8,0:8:13.29:0,13,312	0/0:51,0:10:25.21:0,25,411	0/0:67,0:11:17.74:0,18,287	0/0:7,0:7:18.02:0,18,916	0/0:16,0:16:38.02:0,38,2013	0/0:25,0:24:54.09:0,54,1545	0/1:24,0:19:55.74:694,0,56	0/0:26,0:24:66.23:0,66,3579	0/0:14,0:14:39.04:0,39,1209	0/0:10,0:10:24.08:0,24,988	0/1:17,0:16:94.24:136,0,94	0/0:18,0:17:48.12:0,48,2542	0/0:24,0:24:72.21:0,72,3925	0/0:15,0:15:42.11:0,42,1656	0/0:13,0:12:36.03:0,36,1274	0/0:45,0:43:99:0,117,5571	0/0:33,0:33:96.13:0,96,4600	1/1:3,7:8:14.99:347,15,0	0/1:8,0:8:6.22:82,0,6	1/1:53,0:45:15.99:453,16,0	0/0:2,0:1:3.01:0,3,128	0/0:10,0:10:27.08:0,27,1384	0/0:33,0:32:93.31:0,93,5184	0/0:15,0:15:42.08:0,42,1794	0/0:16,0:15:42.09:0,42,1242	0/1:15,0:15:74.44:261,0,74	0/0:7,0:6:15.03:0,15,571
chr10	107412376	.	C	CGT	882.33	PASS	AB=0.772;AC=7;AF=0.125;AN=56;BaseQRankSum=8.016;DP=618;FS=24.340;HRun=0;HaplotypeScore=89.8753;InbreedingCoeff=0.5166;MQ=55.20;MQ0=30;MQRankSum=-4.167;QD=8.57;ReadPosRankSum=-0.857;VQSLOD=1.5335;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:96.24:0,96,1280	0/0:10,0:10:18.06:0,18,243	0/0:55,0:12:32.61:0,33,336	0/0:77,0:19:39.86:0,40,443	0/0:6,0:6:18.06:0,18,252	0/0:16,0:16:38.78:0,39,542	0/0:23,0:22:53.72:0,54,663	0/1:12,11:22:29.81:428,0,30	0/0:24,0:23:69.20:0,69,925	0/0:8,0:8:21.06:0,21,280	0/0:10,0:10:24.07:0,24,303	0/0:16,0:15:27.09:0,27,375	0/0:14,0:14:39.13:0,39,540	0/0:22,0:22:57.18:0,57,775	0/0:14,0:14:36.10:0,36,481	0/0:13,0:12:33.11:0,33,461	0/0:41,0:41:99:0,117,1530	0/0:34,0:34:92.75:0,93,1266	1/1:8,0:7:15:189,15,0	0/1:6,1:7:15.79:44,0,16	1/1:18,26:40:15.05:240,15,0	0/0:4,0:3:9.03:0,9,123	0/0:10,0:10:21.07:0,21,293	0/0:35,0:35:90.17:0,90,1187	0/0:17,0:17:48.14:0,48,637	0/0:18,0:17:51.16:0,51,691	0/1:13,5:17:7.82:120,0,8	0/0:11,0:10:27.09:0,27,372
chr10	107413086	.	A	AT	603.04	PASS	AB=0.868;AC=14;AF=0.250;AN=56;BaseQRankSum=0.014;DP=454;FS=0.597;HRun=15;HaplotypeScore=64.0623;InbreedingCoeff=0.3503;MQ=67.26;MQ0=15;MQRankSum=-2.529;QD=5.03;ReadPosRankSum=-2.071;VQSLOD=1.4812;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:38:31.31:0,31,298	0/1:1,0:1:0:0,0,0	1/1:10,0:10:3.56:13,4,0	0/0:10,0:10:2.41:0,2,22	0/0:18,2:21:3.88:0,4,182	0/0:21,1:22:22.97:0,23,238	0/0:17,1:22:40.87:0,41,224	1/1:10,10:20:2.77:230,3,0	0/0:11,0:11:17.55:0,18,108	0/0:16,0:15:26.34:0,26,160	0/0:15,1:17:11.85:0,12,174	1/1:10,4:15:6.77:89,7,0	0/0:7,0:7:8.72:0,9,54	0/1:8,0:8:4.93:5,0,73	0/0:14,0:14:26.34:0,26,160	0/0:12,0:11:4.66:0,5,103	0/0:32,1:35:24.59:0,25,240	0/0:24,1:27:59.36:0,59,339	1/1:12,8:20:32.65:253,33,0	0/0:14,2:16:1.44:0,1,83	0/1:3,3:5:6.03:64,0,6	0/0:6,0:5:2.90:0,3,18	0/0:14,0:16:22.08:0,22,177	0/1:10,3:15:28.69:29,0,62	0/0:12,0:12:16.67:0,17,98	0/0:18,0:21:32.41:0,32,179	0/1:10,5:17:3.35:59,0,3	0/1:7,0:5:10.72:11,0,26
chr10	107413106	.	C	CT	153.67	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=0.135;DP=456;FS=1.363;HRun=7;HaplotypeScore=61.6614;InbreedingCoeff=0.4967;MQ=49.21;MQ0=28;MQRankSum=-2.543;QD=8.54;ReadPosRankSum=-0.865;VQSLOD=0.5634;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:66.02:0,66,635	0/0:1,0:1:3:0,3,29	0/0:2,0:2:2.87:0,3,16	0/1:3,0:4:7.07:11,0,7	0/0:22,0:21:36.02:0,36,347	0/0:25,0:22:42.04:0,42,399	0/0:20,0:20:45.07:0,45,434	0/0:23,0:22:50.98:0,51,476	0/0:12,0:11:21.02:0,21,198	0/0:14,0:12:15:0,15,143	0/0:21,0:19:35.05:0,35,315	1/1:5,9:14:21.05:243,21,0	0/0:9,0:9:17.97:0,18,164	0/0:9,0:8:8.99:0,9,87	0/0:15,0:15:29.95:0,30,289	0/0:16,0:15:36.02:0,36,338	0/0:36,0:32:59.92:0,60,547	0/0:31,0:29:57.06:0,57,548	0/0:21,0:19:29.89:0,30,280	0/0:16,0:15:24.01:0,24,232	0/0:8,0:5:12.01:0,12,111	0/0:6,0:5:9.01:0,9,86	0/0:18,0:16:39.01:0,39,365	0/0:19,0:19:37.56:0,38,335	0/0:13,0:12:23.70:0,24,231	0/0:24,0:22:42:0,42,405	0/0:17,0:16:35.96:0,36,327	0/0:4,0:2:6.01:0,6,58
chr10	107413370	.	ATTCTTTTCTTTTCTT	A	3000.15	PASS	AB=0.579;AC=11;AF=0.196;AN=56;BaseQRankSum=10.529;DP=521;FS=1.874;HRun=0;HaplotypeScore=200.4472;InbreedingCoeff=0.8597;MQ=69.18;MQ0=7;MQRankSum=-6.759;QD=32.61;ReadPosRankSum=-0.939;VQSLOD=3.1099;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,123,7133	0/0:5,0:5:15.05:0,15,932	0/0:31,0:20:37.04:0,37,1017	0/0:45,0:17:29.80:0,30,605	0/0:27,0:27:72.24:0,72,4350	0/0:16,0:16:45.02:0,45,2890	0/0:24,0:24:54.10:0,54,3243	1/1:11,19:30:56.96:979,57,0	0/0:16,0:16:42.12:0,42,2160	0/0:22,0:22:51.17:0,51,3123	0/0:16,0:16:30.09:0,30,1761	0/1:3,0:11:16.53:17,0,19	0/0:12,0:12:27.05:0,27,1277	0/0:8,0:8:18.06:0,18,1042	0/0:16,0:16:45.15:0,45,3140	0/0:14,0:14:36.12:0,36,2126	0/0:30,0:30:81.26:0,81,4585	0/0:17,0:17:45.14:0,45,2755	1/1:6,12:18:36.04:906,36,0	1/1:4,7:10:15.02:449,15,0	1/1:3,5:8:12.04:436,12,0	0/0:8,0:8:21.06:0,21,1248	0/0:13,0:13:30.09:0,30,1827	0/0:17,0:17:48.15:0,48,3021	0/0:9,0:9:27.08:0,27,1500	0/0:21,0:21:57.19:0,57,3728	1/1:4,10:14:9.03:386,9,0	0/0:17,0:17:39.13:0,39,2304
chr10	107413895	.	CCCTT	C	50.63	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=3.665;DP=442;FS=1.739;HRun=0;HaplotypeScore=78.0145;InbreedingCoeff=0.5298;MQ=79.93;MQ0=5;MQRankSum=-0.387;QD=1.01;ReadPosRankSum=-0.440;VQSLOD=0.9439;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.27:0,87,2260	0/0:7,0:7:21.07:0,21,564	0/0:22,0:17:45.15:0,45,1113	0/1:42,0:22:29.30:29,0,686	0/0:10,0:10:24.04:0,24,564	0/0:13,0:13:39.13:0,39,1068	0/0:21,0:21:59.23:0,59,1435	0/0:20,0:20:60.21:0,60,1599	0/0:20,0:20:57.20:0,57,1560	0/0:5,0:5:15.05:0,15,410	0/0:14,0:14:42.14:0,42,1094	1/1:0,8:8:6.02:116,6,0	0/0:9,0:9:24.03:0,24,535	0/0:9,0:9:27.09:0,27,738	0/0:19,0:19:57.20:0,57,1525	0/0:9,0:9:15.05:0,15,381	0/0:21,0:21:60.21:0,60,1501	0/0:11,0:10:27.09:0,27,722	0/0:14,0:13:39.12:0,39,952	0/0:9,0:9:27.05:0,27,677	0/0:23,0:23:57.18:0,57,1414	0/0:16,0:16:36.11:0,36,898	0/0:16,0:16:45.15:0,45,1230	0/0:25,0:25:69.19:0,69,1808	0/0:9,0:9:27.05:0,27,676	0/0:21,0:21:54.19:0,54,1448	0/0:11,0:11:33.11:0,33,882	0/0:9,0:9:24.08:0,24,656
chr10	107413959	.	AGGGAGG	A	2681.16	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.344;DP=534;FS=3.447;HRun=0;HaplotypeScore=113.3874;InbreedingCoeff=0.9754;MQ=59.94;MQ0=11;MQRankSum=-0.284;QD=28.83;ReadPosRankSum=-3.070;VQSLOD=2.6149;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:67.26:0,67,1653	0/0:13,0:12:36.02:0,36,882	0/0:24,0:13:35.84:0,36,582	0/0:37,0:23:48.96:0,49,1047	0/0:20,0:20:54.18:0,54,1315	0/0:14,0:14:39.13:0,39,1009	0/0:25,0:24:64.88:0,65,1408	1/1:1,17:18:48.86:716,49,0	0/0:16,0:16:48.16:0,48,1266	0/0:14,0:14:42.14:0,42,1126	0/0:13,0:13:30.08:0,30,743	0/0:13,0:13:34.58:0,35,428	0/0:15,0:15:36.07:0,36,884	0/0:11,0:11:30.57:0,31,801	0/0:20,0:19:48.30:0,48,1254	0/0:14,0:14:42.14:0,42,1154	0/0:27,0:26:66.18:0,66,1748	0/0:16,0:16:33.11:0,33,714	1/1:3,14:16:41.93:771,42,0	1/1:10,0:7:15.05:334,15,0	1/1:28,0:27:7.28:199,7,0	0/0:24,0:23:62.48:0,62,1435	0/0:9,0:9:21.07:0,21,537	0/0:32,0:30:75.26:0,75,2011	0/0:19,0:19:42.57:0,43,957	0/0:20,0:20:60.15:0,60,1531	1/1:20,0:20:41.90:831,42,0	0/0:17,0:17:45.15:0,45,1153
chr10	107413963	.	AGG	A	1779.89	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.034;DP=532;FS=1.886;HRun=4;HaplotypeScore=79.3470;InbreedingCoeff=0.9816;MQ=62.14;MQ0=9;MQRankSum=-2.496;QD=20.94;ReadPosRankSum=-2.730;VQSLOD=0.3964;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:49.15:0,49,1095	0/0:13,0:13:36.12:0,36,650	0/0:28,0:16:44.89:0,45,601	0/0:40,0:26:55.06:0,55,885	0/0:24,0:24:66.15:0,66,1083	0/0:15,0:15:45.15:0,45,791	0/0:24,0:23:63.12:0,63,1038	1/1:17,0:17:41.66:511,42,0	0/0:19,0:19:57.18:0,57,973	0/0:17,0:17:51.17:0,51,897	0/0:14,0:14:33.10:0,33,571	0/0:13,0:13:32.73:0,33,176	0/0:14,0:14:36:0,36,586	0/0:10,0:10:30.10:0,30,555	0/0:19,0:18:45.15:0,45,811	0/0:16,0:16:48.16:0,48,873	0/0:27,0:26:69.15:0,69,1221	0/0:12,0:12:30.05:0,30,474	1/1:16,0:15:38.56:517,39,0	1/1:5,5:7:15.05:213,15,0	1/1:0,24:23:9.03:127,9,0	0/0:23,0:22:60.67:0,61,1053	0/0:9,0:9:24.08:0,24,417	0/0:30,0:29:81.28:0,81,1459	0/0:17,0:17:42.13:0,42,699	0/0:21,0:21:60.21:0,60,1091	1/1:10,8:18:41.99:583,42,0	0/0:19,0:19:54.18:0,54,956
chr10	107414061	.	T	TG	2609.76	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-3.240;DP=637;FS=27.064;HRun=4;HaplotypeScore=81.0117;InbreedingCoeff=0.9918;MQ=70.66;MQ0=3;MQRankSum=0.227;QD=25.84;ReadPosRankSum=-1.761;VQSLOD=1.5126;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.19:0,66,748	0/0:13,0:13:36.10:0,36,408	0/0:53,0:35:59.29:0,59,776	0/0:65,0:40:61.79:0,62,639	0/0:17,0:17:39.08:0,39,421	0/0:24,0:24:66.19:0,66,748	0/0:23,0:23:66.16:0,66,735	1/1:5,10:15:11.72:388,12,0	0/0:21,0:21:54.15:0,54,613	0/0:15,0:15:45.13:0,45,510	0/0:19,0:19:51.15:0,51,578	0/0:13,0:13:33.09:0,33,374	0/0:16,0:16:45.13:0,45,510	0/0:13,0:13:30.08:0,30,340	0/0:30,0:30:78.20:0,78,875	0/0:12,0:12:33.09:0,33,374	0/0:31,0:31:84.24:0,84,953	0/0:14,0:14:33.09:0,33,374	1/1:2,12:14:36.09:492,36,0	1/1:2,20:22:48.16:656,48,0	1/1:0,31:31:53.93:738,54,0	0/0:19,0:19:51.14:0,51,579	0/0:14,0:14:30.08:0,30,340	0/0:30,0:30:81.21:0,81,918	0/0:14,0:14:39.11:0,39,442	0/0:30,0:30:84.22:0,84,943	1/1:1,18:19:39.12:509,39,0	0/0:22,0:22:57.16:0,57,646
chr10	107414487	.	TG	T	1020.15	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=0.531;DP=365;FS=0.000;HRun=3;HaplotypeScore=44.0695;InbreedingCoeff=0.9401;MQ=78.36;MQ0=31;MQRankSum=1.945;QD=13.08;ReadPosRankSum=-1.044;VQSLOD=1.7765;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:39.15:0,39,344	1/1:2,0:2:6:51,6,0	0/0:34,0:14:25.42:0,25,185	0/0:26,0:15:20.38:0,20,166	0/0:14,0:14:32.93:0,33,267	0/0:9,0:8:21.46:0,21,206	0/0:18,0:16:23.94:0,24,311	1/1:6,8:11:26.77:217,27,0	0/0:10,0:10:23.13:0,23,169	0/0:13,0:13:23.84:0,24,227	0/0:4,0:4:11.99:0,12,109	1/1:13,0:12:29.95:246,30,0	0/0:9,0:8:18:0,18,180	0/0:9,0:8:17.79:0,18,151	0/0:11,0:11:29.03:0,29,258	0/0:9,0:9:23.78:0,24,187	0/0:13,0:13:26.84:0,27,239	0/0:13,0:10:18.94:0,19,166	1/1:5,12:16:35.85:294,36,0	1/1:9,0:7:12.38:90,12,0	1/1:13,0:11:23.48:196,23,0	0/0:14,0:12:23.95:0,24,201	0/0:8,0:6:12.34:0,12,94	0/0:14,0:13:29.21:0,29,252	0/0:6,0:4:8.14:0,8,47	0/0:23,0:20:48.42:0,48,428	1/1:9,0:8:15.87:117,16,0	0/0:11,0:9:23.22:0,23,144
chr10	107414694	.	GAAA	G	2448.21	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.824;DP=478;FS=0.999;HRun=13;HaplotypeScore=78.4360;InbreedingCoeff=0.9177;MQ=62.97;MQ0=1;MQRankSum=-0.690;QD=19.74;ReadPosRankSum=1.808;VQSLOD=2.6413;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:31:84.02:0,84,1169	0/0:1,0:5:4.98:0,5,11	0/0:12,0:10:7.55:0,8,186	0/0:6,0:6:4.25:0,4,30	0/0:16,0:16:42.07:0,42,654	0/0:19,0:23:64.07:0,64,1092	0/0:14,0:17:39.11:0,39,636	1/1:8,21:29:56.95:653,57,0	0/0:12,0:12:33.09:0,33,548	0/0:13,0:14:39.11:0,39,699	0/0:5,0:7:18.02:0,18,233	1/1:1,11:12:21.06:255,21,0	0/0:11,0:13:24.01:0,24,292	0/0:3,0:4:8.99:0,9,104	0/0:14,0:14:42.10:0,42,653	0/0:15,0:18:42.10:0,42,671	0/0:32,0:36:98.29:0,98,1655	0/0:19,0:20:54.10:0,54,863	1/1:6,13:22:34.09:446,34,0	1/1:4,13:18:28.35:344,28,0	1/1:4,11:15:22.38:318,22,0	0/0:11,0:11:27.02:0,27,371	0/0:20,0:20:42.14:0,42,793	0/0:14,0:17:43.65:0,44,689	0/0:19,0:20:54.13:0,54,867	0/0:25,0:26:59.52:0,60,893	1/1:4,22:27:49.48:617,49,0	0/0:6,0:7:18.03:0,18,203
chr10	107415012	.	CGTGTGTGTGTGTGTGTGTGTGT	C	2066.47	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.380;DP=559;FS=5.897;HRun=0;HaplotypeScore=279.6580;InbreedingCoeff=0.8094;MQ=64.98;MQ0=15;MQRankSum=-0.682;QD=16.94;ReadPosRankSum=0.600;VQSLOD=1.8827;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:35:45.13:0,45,2772	0/0:6,0:8:18.06:0,18,938	0/0:21,0:12:3.01:0,3,73	0/0:26,0:19:3.01:0,3,73	0/0:10,0:10:15.05:0,15,662	0/0:25,0:24:45.14:0,45,3417	0/0:11,0:14:30.10:0,30,2338	1/1:26,9:32:21.84:336,22,0	0/0:16,0:17:32.66:0,33,2715	0/0:16,0:13:26.30:0,26,1811	0/0:8,0:13:8.77:0,9,692	0/0:18,0:23:34:0,34,1634	0/0:12,0:14:28.34:0,28,2280	0/0:14,0:14:15.05:0,15,936	0/0:27,0:28:51.18:0,51,3795	0/0:24,0:27:49.11:0,49,3920	0/0:26,0:27:41.81:0,42,2743	0/0:24,0:24:54.66:0,55,4277	1/1:24,1:23:3:174,3,0	1/1:6,6:13:15.05:810,15,0	1/1:29,0:28:4.82:53,5,0	0/0:14,0:16:27.09:0,27,2213	0/0:10,0:12:18.06:0,18,1445	0/0:21,0:22:33.11:0,33,3068	0/0:18,0:19:42.14:0,42,3822	0/0:16,0:16:15.05:0,15,1240	1/1:15,4:20:15.05:849,15,0	0/0:7,0:7:13.86:0,14,938
chr10	107415968	.	A	AG	5047.61	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-11.573;DP=747;FS=2.595;HRun=3;HaplotypeScore=69.7868;InbreedingCoeff=0.9958;MQ=80.98;MQ0=0;MQRankSum=-4.067;QD=37.95;ReadPosRankSum=-2.055;VQSLOD=4.5080;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,138,1656	0/0:8,0:8:24.07:0,24,287	0/0:24,0:24:60.18:0,60,712	0/0:25,0:25:55.47:0,55,686	0/0:26,0:26:75.22:0,75,885	0/0:30,0:30:81.24:0,81,960	0/0:32,0:32:87.25:0,87,1028	1/1:3,19:22:54.14:728,54,0	0/0:29,0:29:78.19:0,78,900	0/0:18,0:18:54.17:0,54,648	0/0:18,0:18:54.16:0,54,645	0/0:29,0:29:81.25:0,81,971	0/0:29,0:29:87.27:0,87,1044	0/0:19,0:19:51.16:0,51,612	0/0:34,0:34:93.29:0,93,1116	0/0:36,0:36:99:0,102,1213	0/0:44,0:44:99:0,120,1440	0/0:21,0:21:54.16:0,54,648	1/1:0,19:19:57.19:794,57,0	1/1:0,26:26:72.24:1006,72,0	1/1:0,48:48:99:1848,132,0	0/0:28,0:28:81.25:0,81,966	0/0:13,0:13:39.12:0,39,465	0/0:45,0:45:99:0,117,1359	0/0:21,0:21:63.15:0,63,729	0/0:29,0:29:81.25:0,81,972	1/1:1,17:18:48.16:671,48,0	0/0:5,0:5:15.03:0,15,168
chr10	107416123	.	GTGTGTGTCTGTGTC	G	362.38	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=8.739;DP=664;FS=4.582;HRun=0;HaplotypeScore=231.7206;InbreedingCoeff=0.1851;MQ=52.11;MQ0=32;MQRankSum=0.526;QD=4.59;ReadPosRankSum=2.501;VQSLOD=2.5788;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:74.59:0,75,2246	1/1:2,4:6:3.01:36,3,0	./.	0/0:18,0:1:2.92:0,3,17	0/0:14,0:14:24.08:0,24,542	0/0:32,0:31:59.10:0,59,1820	0/0:30,0:29:3.12:0,3,840	0/0:26,0:19:29.83:0,30,164	0/0:39,0:39:1.05:0,1,3216	0/0:31,0:31:81.09:0,81,1590	0/0:10,0:9:11.22:0,11,335	0/1:20,0:20:2.29:24,0,2	0/0:23,0:21:26.30:0,26,1761	0/0:17,0:17:45.15:0,45,1355	0/0:38,0:38:8.89:0,9,3198	0/0:31,0:28:39:0,39,3129	0/0:41,0:41:83.45:0,83,3289	0/0:25,0:25:55.73:0,56,2049	0/1:11,0:11:26.94:282,0,27	0/1:10,0:7:0.02:0,0,0	0/0:8,0:5:1.25:0,1,3	0/0:29,0:29:39.44:0,39,850	0/0:20,0:20:22.52:0,23,724	0/0:53,0:53:18.80:0,19,3778	0/1:21,0:21:28.22:28,0,1497	0/0:36,0:35:7.09:0,7,1289	0/1:11,0:9:26.52:107,0,27	0/0:18,0:18:2.50:0,2,1851
chr10	107416135	.	GTC	G	325.96	PASS	AB=0.767;AC=10;AF=0.185;AN=54;BaseQRankSum=8.890;DP=665;FS=0.000;HRun=0;HaplotypeScore=101.2017;InbreedingCoeff=0.6725;MQ=52.29;MQ0=33;MQRankSum=-7.744;QD=3.98;ReadPosRankSum=-1.138;VQSLOD=2.3756;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:37:68.36:0,68,1339	1/1:6,0:6:2.94:18,3,0	./.	0/0:12,0:1:3.01:0,3,53	0/0:14,0:14:27.04:0,27,427	0/0:35,0:34:84.12:0,84,1295	0/0:34,0:34:57.60:0,58,910	1/1:22,0:15:32.17:184,32,0	0/0:41,0:41:99:0,111,1872	0/0:30,0:28:84.27:0,84,1436	0/0:10,0:9:20.96:0,21,289	1/1:19,3:22:6.45:62,6,0	0/0:25,0:23:69.21:0,69,1208	0/0:19,0:19:51.17:0,51,946	0/0:43,0:43:99:0,116,2009	0/0:29,0:26:69.47:0,69,1283	0/0:45,0:45:99:0,122,2026	0/0:27,0:27:76.30:0,76,1176	1/1:8,1:9:2.62:122,3,0	0/1:7,3:7:0:0,0,0	0/0:9,0:6:3.01:0,3,50	0/0:24,0:24:33.08:0,33,528	0/0:18,0:18:33.03:0,33,554	0/0:54,0:54:99:0,135,2299	0/0:20,0:20:54.17:0,54,887	0/0:29,0:28:78.23:0,78,1220	0/1:9,1:10:5.23:76,0,5	0/0:19,0:18:51.17:0,51,896
chr10	107416141	.	GTCTGTGTC	G	466.58	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=8.729;DP=661;FS=0.762;HRun=0;HaplotypeScore=160.4998;InbreedingCoeff=0.5314;MQ=52.09;MQ0=32;MQRankSum=-6.912;QD=5.43;ReadPosRankSum=-1.349;VQSLOD=2.5458;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:37:78.05:0,78,2047	0/0:5,0:5:2.78:0,3,19	0/0:9,0:3:6.91:0,7,98	0/0:16,0:6:17.81:0,18,234	0/0:12,0:12:21.07:0,21,450	0/0:36,0:35:87.24:0,87,1908	0/0:32,0:32:58.99:0,59,1229	0/1:19,0:13:13.44:78,0,13	0/0:38,0:38:99:0,102,2869	0/0:31,0:28:81.23:0,81,1637	0/0:9,0:8:15.52:0,16,407	1/1:21,0:22:2.17:40,2,0	0/0:24,0:22:66.23:0,66,1791	0/0:21,0:21:57.20:0,57,1418	0/0:43,0:43:99:0,117,3145	0/0:29,0:27:74.49:0,74,2383	0/0:43,0:43:99:0,117,2956	0/0:28,0:28:81.12:0,81,1929	1/1:7,1:8:20.28:270,20,0	1/1:9,3:9:2.99:24,3,0	0/1:10,0:7:14.92:15,0,47	0/0:20,0:20:30.10:0,30,668	0/0:21,0:21:41.46:0,41,877	0/0:52,0:53:99:0,134,3555	0/0:20,0:20:48.16:0,48,1280	0/0:25,0:24:72.20:0,72,1540	1/1:14,1:12:0.72:178,1,0	0/0:19,0:18:50.53:0,51,1384
chr10	107417894	.	A	ATGG	637.60	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.560;DP=956;FS=0.000;HRun=0;HaplotypeScore=132.6693;InbreedingCoeff=0.7821;MQ=52.11;MQ0=39;MQRankSum=0.710;QD=11.81;ReadPosRankSum=1.195;VQSLOD=3.4162;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:39:66.15:0,66,873	0/0:10,0:10:27.03:0,27,348	0/0:32,0:2:2.94:0,3,18	0/0:34,0:9:8.35:0,8,200	0/0:17,0:15:21.04:0,21,262	0/0:23,0:21:31.75:0,32,447	0/0:45,0:43:78.79:0,79,1118	0/0:38,0:33:26.98:0,27,345	0/0:46,0:46:99:0,105,1421	0/0:39,0:37:68.80:0,69,951	0/0:13,0:13:24.08:0,24,343	1/1:12,40:54:36.51:732,37,0	0/0:32,0:32:72.17:0,72,955	0/0:37,0:37:69.14:0,69,908	0/0:37,0:38:84.22:0,84,1132	0/0:41,0:40:90.26:0,90,1248	0/0:31,0:30:72.12:0,72,983	0/0:35,0:35:30.09:0,30,898	0/0:29,0:17:33.10:0,33,445	0/0:22,0:21:36.09:0,36,514	0/0:117,0:109:99:0,159,2174	0/0:20,0:19:33.11:0,33,457	0/0:16,0:15:20.86:0,21,300	0/0:52,0:52:99:0,129,1802	0/0:23,0:17:21.06:0,21,284	0/0:38,0:37:54.02:0,54,712	0/0:16,0:15:14.99:0,15,382	0/0:16,0:14:24.08:0,24,337
chr10	107418517	.	CAGTGTGTGTGTGTGTG	C	2644.14	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=1.645;DP=556;FS=3.573;HRun=0;HaplotypeScore=198.7434;InbreedingCoeff=0.8215;MQ=63.96;MQ0=10;MQRankSum=-4.495;QD=22.41;ReadPosRankSum=-0.983;VQSLOD=2.3043;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:55.63:0,56,1748	0/0:9,0:9:20.86:0,21,716	0/0:27,0:16:41.20:0,41,570	0/0:30,0:17:48.54:0,49,865	0/0:21,0:21:54.05:0,54,1954	0/0:18,0:18:42.08:0,42,1427	0/0:33,0:32:80.83:0,81,2998	1/1:23,0:22:56.19:543,56,0	0/0:17,0:17:42.08:0,42,1879	0/0:23,0:23:69.19:0,69,2932	0/0:12,0:12:33.03:0,33,1522	0/1:14,0:14:92.03:92,0,689	0/0:14,0:14:42.09:0,42,2282	0/0:11,0:11:30.06:0,30,1554	0/0:19,0:19:42.53:0,43,1523	0/0:25,0:25:65.36:0,65,3533	0/0:23,0:23:52.62:0,53,2046	0/0:19,0:22:54.01:0,54,2267	1/1:13,1:14:41.43:538,41,0	1/1:1,16:17:21.07:698,21,0	1/1:1,36:37:3.01:83,3,0	0/0:23,0:23:57.57:0,58,2399	0/0:13,0:13:27.05:0,27,1328	0/0:28,0:28:78.12:0,78,3577	0/0:14,0:14:33.06:0,33,1571	0/0:23,0:23:69.13:0,69,2642	1/1:1,11:13:20.86:861,21,0	0/0:3,0:2:5.99:0,6,50
chr10	107418518	.	AGT	A	154.28	PASS	AB=0.874;AC=11;AF=0.229;AN=48;BaseQRankSum=5.705;DP=585;FS=6.738;HRun=0;HaplotypeScore=84.8435;InbreedingCoeff=0.2885;MQ=62.02;MQ0=10;MQRankSum=-1.824;QD=1.11;ReadPosRankSum=1.244;VQSLOD=0.9921;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:33:15:0,15,157	0/0:9,0:9:5.99:0,6,48	./.	0/0:29,0:16:0:0,0,0	0/1:22,1:23:14.91:15,0,150	0/0:18,0:18:8.70:0,9,105	0/0:35,0:34:23.96:0,24,290	./.	0/1:14,3:17:47.23:47,0,140	0/0:25,0:25:22.30:0,22,273	0/0:12,0:12:18.04:0,18,229	0/0:21,0:21:8.90:0,9,69	0/0:15,0:15:21.03:0,21,275	0/0:12,0:12:12.02:0,12,157	0/1:16,1:18:28.78:29,0,96	0/0:24,2:26:9.97:0,10,528	0/0:13,0:27:20.97:0,21,176	0/0:24,0:25:26.77:0,27,225	1/1:13,0:13:2.84:14,3,0	1/1:17,0:17:11.36:56,11,0	./.	0/1:22,2:24:8.58:9,0,248	0/1:9,5:14:44.20:44,0,175	0/0:30,2:32:6.39:0,6,393	0/0:14,0:14:18.02:0,18,209	0/0:23,0:23:19.03:0,19,206	1/1:13,0:13:17.04:84,17,0	./.
chr10	107418936	.	C	CGT	337.25	PASS	AB=0.891;AC=3;AF=0.054;AN=56;BaseQRankSum=4.771;DP=853;FS=11.350;HRun=0;HaplotypeScore=153.9560;InbreedingCoeff=-0.0125;MQ=56.97;MQ0=7;MQRankSum=0.444;QD=4.32;ReadPosRankSum=1.601;VQSLOD=2.0779;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:96.30:0,96,1256	0/0:12,0:12:18.11:0,18,197	0/1:16,0:5:4.41:4,0,13	0/1:18,0:8:3.12:3,0,16	0/0:16,0:16:33.71:0,34,447	0/0:14,0:14:30.10:0,30,406	0/0:49,0:49:99:0,117,1541	0/0:27,0:25:47.88:0,48,499	0/0:40,0:40:99:0,104,1300	0/0:44,0:43:99:0,119,1531	0/0:12,0:12:27.08:0,27,347	0/1:22,21:43:91.13:411,0,91	0/0:49,0:49:99:0,120,1549	0/0:38,0:37:61.61:0,62,1300	0/0:39,0:39:96.26:0,96,1234	0/0:44,0:44:99:0,126,1620	0/0:40,0:40:92.41:0,92,1203	0/0:23,0:22:58.84:0,59,812	0/0:20,0:18:41.06:0,41,460	0/0:18,0:18:5.47:0,5,79	0/0:78,0:76:95.63:0,96,1171	0/0:29,0:29:84.27:0,84,1131	0/0:10,0:10:27.06:0,27,331	0/0:55,0:55:99:0,150,1925	0/0:15,0:15:33.10:0,33,436	0/0:36,0:35:99:0,101,1316	0/0:12,0:12:14.91:0,15,171	0/0:12,0:12:30.10:0,30,405
chr10	107418942	.	CGT	C	1675.20	PASS	AB=0.869;AC=22;AF=0.393;AN=56;BaseQRankSum=10.636;DP=850;FS=11.694;HRun=0;HaplotypeScore=143.2183;InbreedingCoeff=-0.0469;MQ=56.89;MQ0=10;MQRankSum=-1.955;QD=3.23;ReadPosRankSum=-1.223;VQSLOD=1.8827;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,7:41:51.30:51,0,581	0/1:12,0:12:17.03:17,0,121	0/0:21,0:6:6.02:0,6,74	0/0:23,0:10:5.04:0,5,34	0/0:12,0:14:17.79:0,18,261	0/0:13,0:13:27.50:0,28,439	0/0:45,3:48:5.16:0,5,1108	1/1:8,0:28:44.56:446,45,0	0/1:32,3:36:90.55:91,0,764	0/0:45,1:45:19.67:0,20,1172	0/1:9,3:12:49.23:49,0,214	0/0:40,0:40:30.50:0,31,534	0/0:46,0:46:83.14:0,83,1356	0/0:40,2:42:12.37:0,12,1068	0/0:34,3:37:7.92:0,8,1047	0/1:38,8:46:99:147,0,1232	0/1:36,2:38:44.96:45,0,960	0/1:19,4:23:65.53:66,0,549	1/1:11,0:17:5.91:51,6,0	0/1:3,0:18:0.11:0,0,0	1/1:44,24:69:56.58:620,57,0	0/1:26,5:31:68.37:68,0,856	0/1:8,1:9:20.13:20,0,151	0/1:47,7:54:99:102,0,1225	0/1:15,1:16:2.06:2,0,401	0/1:34,2:36:11.58:12,0,881	1/1:5,0:12:5.91:51,6,0	0/1:12,1:13:5.07:5,0,394
chr10	107420740	.	AG	A	760.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.461;DP=702;FS=0.781;HRun=3;HaplotypeScore=65.5335;InbreedingCoeff=0.9413;MQ=81.77;MQ0=0;MQRankSum=-0.994;QD=29.25;ReadPosRankSum=0.732;VQSLOD=2.9723;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,105,1492	0/0:7,0:7:21.07:0,21,302	0/0:23,0:23:63.19:0,63,881	0/0:19,0:19:45.78:0,46,688	0/0:29,0:29:81.27:0,81,1159	0/0:21,0:21:51.17:0,51,734	0/0:28,0:28:81.26:0,81,1148	0/0:39,0:39:99:0,117,1684	0/0:20,0:20:57.19:0,57,820	0/0:31,0:31:87.29:0,87,1252	0/0:14,0:14:39.09:0,39,537	1/1:1,25:26:69.22:855,69,0	0/0:17,0:17:48.16:0,48,689	0/0:21,0:21:63.21:0,63,907	0/0:28,0:28:78.25:0,78,1106	0/0:21,0:21:60.20:0,60,864	0/0:34,0:34:99:0,99,1423	0/0:26,0:26:75.25:0,75,1078	0/0:26,0:26:72.24:0,72,1036	0/0:12,0:12:33.11:0,33,466	0/0:75,0:75:99:0,220,3132	0/0:14,0:14:36.11:0,36,494	0/0:22,0:22:63.17:0,63,883	0/0:35,0:35:99:0,105,1472	0/0:18,0:18:54.14:0,54,738	0/0:21,0:21:63.19:0,63,887	0/0:31,0:30:81.23:0,81,1141	0/0:3,0:3:9.03:0,9,130
chr10	107420858	.	GCC	G	346	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.938;DP=694;FS=1.316;HRun=2;HaplotypeScore=81.8480;InbreedingCoeff=0.9986;MQ=87.44;MQ0=0;MQRankSum=-1.603;QD=38.44;ReadPosRankSum=1.625;VQSLOD=3.7956;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,2681	1/1:0,9:9:27.09:440,27,0	0/0:27,0:27:79.74:0,80,1483	0/0:25,0:25:66.85:0,67,1263	0/0:13,0:13:39.12:0,39,732	0/0:15,0:15:45.15:0,45,913	0/0:38,0:38:99:0,114,2278	0/0:35,0:35:99:0,102,2026	0/0:26,0:26:78.24:0,78,1496	0/0:29,0:29:87.23:0,87,1719	0/0:22,0:22:57.17:0,57,1085	0/0:22,0:22:66.23:0,66,1337	0/0:23,0:23:69.22:0,69,1348	0/0:21,0:21:63.21:0,63,1230	0/0:24,0:24:72.23:0,72,1426	0/0:19,0:19:57.20:0,57,1158	0/0:22,0:22:66.23:0,66,1340	0/0:19,0:19:57.20:0,57,1158	0/0:20,0:20:60.21:0,60,1199	0/0:17,0:17:51.13:0,51,990	0/0:33,0:33:99:0,99,2012	0/0:28,0:28:81.25:0,81,1560	0/0:22,0:22:63.22:0,63,1278	0/0:42,0:42:99:0,126,2522	0/0:30,0:30:87.30:0,87,1757	0/0:33,0:33:96.33:0,96,1936	0/0:25,0:25:75.26:0,75,1512	0/0:11,0:11:33.11:0,33,669
chr10	107421540	.	C	CGT	11180.78	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.008;DP=1078;FS=2.341;HRun=0;HaplotypeScore=147.0690;InbreedingCoeff=0.9999;MQ=66.34;MQ0=0;MQRankSum=-3.539;QD=42.67;ReadPosRankSum=1.123;VQSLOD=5.9432;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,111,1459	0/0:12,0:12:33.11:0,33,446	0/0:49,0:43:73.73:0,74,1092	0/0:43,0:38:64.04:0,64,956	0/0:21,0:21:60.17:0,60,767	0/0:27,0:26:69.23:0,69,933	0/0:23,0:23:60.19:0,60,811	1/1:6,38:45:99:2023,123,0	0/0:50,0:50:99:0,135,1804	0/0:56,0:56:99:0,147,1945	0/0:18,0:18:45.09:0,45,572	1/1:3,40:43:99:1893,108,0	0/0:56,0:56:99:0,159,2112	0/0:45,0:45:99:0,111,1500	0/0:61,0:61:99:0,175,2347	0/0:50,0:50:99:0,135,1808	0/0:27,0:27:59.29:0,59,863	0/0:32,0:32:84.28:0,84,1131	1/1:4,17:21:51.12:809,51,0	1/1:3,23:27:69.24:1204,69,0	1/1:5,80:85:99:3365,193,0	0/0:32,0:32:93.31:0,93,1255	0/0:22,0:22:63.21:0,63,851	0/0:42,0:42:99:0,114,1524	0/0:36,0:36:95.70:0,96,1254	0/0:50,0:50:99:0,141,1870	1/1:3,38:40:99:1886,108,0	0/0:23,0:23:57.19:0,57,771
chr10	107428350	.	T	TCTC	513.52	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.267;DP=866;FS=0.000;HRun=0;HaplotypeScore=134.1243;InbreedingCoeff=0.9895;MQ=82.17;MQ0=0;MQRankSum=-1.280;QD=42.79;ReadPosRankSum=2.152;VQSLOD=5.2272;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:71,0:71:99:0,196,3203	1/1:1,11:12:27.09:608,27,0	0/0:18,0:18:41.15:0,41,585	0/0:30,0:30:74.69:0,75,1037	0/0:13,0:13:29.93:0,30,463	0/0:21,0:21:60.20:0,60,970	0/0:34,0:34:96.33:0,96,1581	0/0:31,0:31:75.18:0,75,1105	0/0:34,0:34:99:0,99,1621	0/0:30,0:30:87.29:0,87,1426	0/0:11,0:11:27.09:0,27,427	0/0:50,0:50:99:0,138,2236	0/0:30,0:30:84.08:0,84,1306	0/0:40,0:40:99:0,111,1794	0/0:48,0:48:99:0,135,2173	0/0:31,0:31:87.28:0,87,1420	0/0:41,0:41:99:0,108,1730	0/0:29,0:29:84.27:0,84,1373	0/0:21,0:21:60.16:0,60,951	0/0:22,0:22:60.20:0,60,999	0/0:83,0:83:99:0,223,3634	0/0:20,0:20:60.20:0,60,970	0/0:28,0:28:72.23:0,72,1166	0/0:30,0:30:87.28:0,87,1422	0/0:22,0:22:65.87:0,66,1030	0/0:31,0:31:84.29:0,84,1387	0/0:29,0:29:84.26:0,84,1338	0/0:6,0:6:18.06:0,18,300
chr10	107429148	.	TA	T	115.99	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=3.438;DP=323;FS=12.187;HRun=1;HaplotypeScore=39.7976;InbreedingCoeff=0.8616;MQ=69.64;MQ0=3;MQRankSum=-0.205;QD=23.20;ReadPosRankSum=-0.529;VQSLOD=2.0265;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:50.91:0,51,733	1/1:0,5:5:15.05:204,15,0	0/0:6,0:5:12.04:0,12,175	0/0:6,0:6:15.03:0,15,197	0/0:10,0:9:27.04:0,27,381	0/0:19,0:19:57.18:0,57,849	0/0:10,0:10:30.09:0,30,440	0/0:32,0:32:92.47:0,92,1285	0/0:6,0:6:18.05:0,18,259	0/0:7,0:7:21.07:0,21,324	0/0:10,0:10:28.34:0,28,413	0/0:13,0:13:14.05:0,14,155	0/0:10,0:10:30.10:0,30,474	0/0:11,0:11:33.10:0,33,483	0/0:9,0:9:27.09:0,27,405	0/0:8,0:8:23.67:0,24,340	0/0:24,0:24:72.13:0,72,998	0/0:27,0:27:72.18:0,72,1060	0/0:14,0:14:38.78:0,39,494	0/0:4,0:4:12.04:0,12,180	0/0:9,0:9:25.31:0,25,346	./.	0/0:7,0:7:16.77:0,17,228	0/0:7,0:7:21.05:0,21,300	0/0:25,0:25:69.44:0,69,1081	0/0:9,0:8:24.03:0,24,343	0/0:8,0:8:21.07:0,21,286	0/0:9,0:9:27.06:0,27,375
chr10	107429164	.	ATTATTATTG	A	297.16	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=7.202;DP=307;FS=1.780;HRun=0;HaplotypeScore=84.9837;InbreedingCoeff=0.1265;MQ=57.37;MQ0=7;MQRankSum=-5.025;QD=4.64;ReadPosRankSum=-2.005;VQSLOD=1.5220;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:46.33:0,46,1088	0/0:6,0:6:11.43:0,11,346	0/0:8,0:3:7.31:0,7,83	0/0:3,0:2:3:0,3,29	0/0:12,0:11:32.92:0,33,598	0/0:13,0:12:36.12:0,36,1265	0/0:9,0:9:26.97:0,27,572	0/1:26,0:26:26.62:27,0,650	0/0:5,0:5:15.04:0,15,567	0/0:12,0:12:36.04:0,36,659	0/0:8,0:8:24.05:0,24,699	1/1:0,12:12:6.02:165,6,0	0/0:11,0:11:33.08:0,33,905	0/0:9,0:9:27.07:0,27,944	0/0:10,0:10:27.04:0,27,532	0/0:7,0:7:21.07:0,21,855	0/0:26,0:26:75.07:0,75,1858	0/0:27,0:27:70.81:0,71,2075	0/1:11,0:11:70.34:70,0,221	0/0:3,0:3:6.02:0,6,141	0/1:6,0:6:9.32:9,0,198	0/0:1,0:1:3:0,3,25	0/0:6,0:6:15.88:0,16,293	0/0:8,0:8:23.92:0,24,276	0/0:24,0:24:71.95:0,72,2233	0/0:10,0:9:26.98:0,27,612	0/1:9,0:9:33.66:145,0,34	0/0:8,0:8:24.07:0,24,874
chr10	107429170	.	ATTGTTG	A	1120.63	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.011;DP=334;FS=13.878;HRun=0;HaplotypeScore=70.1528;InbreedingCoeff=0.8520;MQ=54.70;MQ0=10;MQRankSum=-5.571;QD=16.98;ReadPosRankSum=-1.276;VQSLOD=1.4187;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:42.12:0,42,797	0/0:7,0:7:18.06:0,18,437	0/0:13,0:3:8.02:0,8,51	0/0:5,0:2:6.02:0,6,101	0/0:14,0:13:30.10:0,30,560	0/0:17,0:16:42.12:0,42,875	0/0:9,0:9:21.07:0,21,394	1/1:25,0:25:41.93:406,42,0	0/0:5,0:5:15.05:0,15,399	0/0:14,0:14:33.11:0,33,602	0/0:7,0:7:18.06:0,18,420	1/1:12,0:12:5.88:48,6,0	0/0:13,0:13:27.09:0,27,590	0/0:10,0:10:30.10:0,30,726	0/0:10,0:10:27.09:0,27,452	0/0:9,0:9:27.09:0,27,593	0/0:25,0:25:66.20:0,66,1296	0/0:28,0:28:60.12:0,60,1310	1/1:9,2:11:21.02:311,21,0	1/1:4,0:4:5.93:53,6,0	1/1:5,0:5:6.02:100,6,0	0/0:1,0:1:3.01:0,3,49	0/0:6,0:6:18.05:0,18,318	0/0:9,0:9:17.97:0,18,239	0/0:26,0:26:63.07:0,63,1364	0/0:12,0:11:21.06:0,21,425	1/1:5,3:9:24.08:374,24,0	0/0:7,0:8:24.03:0,24,600
chr10	107429195	.	ATGT	A	1737.26	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.797;DP=408;FS=4.328;HRun=0;HaplotypeScore=64.6135;InbreedingCoeff=0.9374;MQ=54.73;MQ0=9;MQRankSum=-2.105;QD=23.80;ReadPosRankSum=-2.635;VQSLOD=2.3884;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:50.95:0,51,935	0/0:9,0:9:27.07:0,27,490	0/0:23,0:10:6.24:0,6,233	0/0:11,0:8:24.08:0,24,459	0/0:19,0:18:51.17:0,51,941	0/0:16,0:16:39.12:0,39,735	0/0:13,0:13:30.10:0,30,534	1/1:4,23:27:65.89:802,66,0	0/0:7,0:7:21.07:0,21,395	0/0:16,0:16:39.13:0,39,753	0/0:10,0:10:30.08:0,30,450	0/0:12,0:12:10.28:0,10,152	0/0:13,0:13:30.10:0,30,575	0/0:12,0:12:33.10:0,33,625	0/0:14,0:14:36.12:0,36,671	0/0:17,0:17:26.81:0,27,709	0/0:25,0:25:63.97:0,64,1163	0/0:26,1:27:18.70:0,19,1025	1/1:3,16:18:42.11:528,42,0	1/1:1,5:6:11.98:136,12,0	1/1:1,5:6:9.03:115,9,0	0/0:5,0:5:15.04:0,15,226	0/0:11,0:11:27.08:0,27,475	0/0:9,0:9:27.09:0,27,490	0/0:21,0:21:51.52:0,52,995	0/0:13,0:12:36.12:0,36,692	1/1:3,12:15:25.88:325,26,0	0/0:9,0:9:25.90:0,26,500
chr10	107430413	.	T	TC	387.27	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.467;DP=706;FS=2.384;HRun=3;HaplotypeScore=68.5725;InbreedingCoeff=0.9945;MQ=76.63;MQ0=0;MQRankSum=-2.540;QD=29.79;ReadPosRankSum=-1.219;VQSLOD=2.8047;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.24:0,78,932	0/0:7,0:7:21.06:0,21,251	0/0:20,0:20:30.16:0,30,549	0/0:23,0:23:61.90:0,62,701	0/0:14,0:14:42.13:0,42,503	0/0:21,0:21:60.18:0,60,715	0/0:37,0:37:99:0,108,1292	0/0:26,0:26:78.23:0,78,924	0/0:33,0:33:93.28:0,93,1114	0/0:21,0:21:60.17:0,60,703	0/0:13,0:13:33.10:0,33,395	0/0:50,0:50:99:0,138,1654	0/0:33,0:33:90.26:0,90,1067	0/0:24,0:24:69.21:0,69,827	0/0:28,0:28:81.25:0,81,971	0/0:29,0:29:87.16:0,87,1023	0/0:24,0:24:69.21:0,69,828	0/0:33,0:33:90.23:0,90,1063	0/0:22,0:21:54.12:0,54,631	1/1:1,12:13:36.08:482,36,0	0/0:46,0:46:99:0,126,1511	0/0:18,0:18:51.16:0,51,611	0/0:15,0:15:42.13:0,42,504	0/0:45,0:45:99:0,129,1547	0/0:33,0:33:93.27:0,93,1099	0/0:16,0:16:42.13:0,42,504	0/0:26,0:26:75.23:0,75,899	0/0:10,0:10:30.09:0,30,360
chr10	107431319	.	GC	G	3596.87	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.790;DP=537;FS=2.236;HRun=7;HaplotypeScore=51.9976;InbreedingCoeff=0.9423;MQ=74.24;MQ0=0;MQRankSum=0.161;QD=26.45;ReadPosRankSum=-1.009;VQSLOD=3.8354;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:75.22:0,75,918	0/0:2,0:2:3.01:0,3,38	0/0:12,0:12:21.02:0,21,244	0/0:6,0:6:11.40:0,11,121	0/0:10,0:10:27.07:0,27,327	0/0:15,1:16:17.51:0,18,517	0/0:28,0:28:66.17:0,66,790	1/1:4,13:17:39.07:391,39,0	0/0:24,0:24:69.22:0,69,865	0/0:10,0:10:27.09:0,27,340	0/0:8,0:8:18.06:0,18,226	0/0:25,0:25:69.22:0,69,868	0/0:21,0:21:63.20:0,63,782	0/0:27,0:27:78.23:0,78,958	0/0:11,0:11:33.10:0,33,404	0/0:22,0:22:66.21:0,66,830	0/0:30,0:30:78.21:0,78,951	0/0:31,0:31:87.16:0,87,1030	1/1:4,19:23:57.09:567,57,0	1/1:0,13:13:39.03:378,39,0	1/1:2,64:66:99:1803,177,0	0/0:5,0:5:15.05:0,15,187	0/0:7,0:7:18.06:0,18,225	0/0:28,0:28:81.24:0,81,994	0/0:14,0:14:39.12:0,39,491	0/0:21,0:21:57.17:0,57,704	1/1:0,17:17:45.10:459,45,0	0/0:13,0:13:39.10:0,39,473
chr10	107433535	.	A	AGTGGGG	215.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.564;DP=562;FS=21.993;HRun=0;HaplotypeScore=123.0349;InbreedingCoeff=0.8427;MQ=80.88;MQ0=1;MQRankSum=-2.287;QD=30.72;ReadPosRankSum=-0.269;VQSLOD=1.4065;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:70.04:0,70,1448	1/1:2,3:7:9.03:298,9,0	0/0:24,0:20:39.03:0,39,672	0/0:41,0:33:46.59:0,47,1045	0/0:20,0:20:48.03:0,48,972	0/0:16,0:16:42.05:0,42,830	0/0:31,0:31:66.17:0,66,1348	0/0:28,0:28:54.18:0,54,1122	0/0:23,0:23:66.23:0,66,1447	0/0:14,0:14:39.13:0,39,816	0/0:15,0:15:33.10:0,33,614	0/0:27,0:26:71.82:0,72,1480	0/0:11,0:11:27.09:0,27,562	0/0:15,0:15:33.11:0,33,724	0/0:15,0:15:36.12:0,36,789	0/0:28,0:28:69.21:0,69,1418	0/0:26,0:26:66.20:0,66,1388	0/0:27,0:27:66.21:0,66,1388	0/0:15,0:15:39.11:0,39,754	0/0:12,0:12:30.09:0,30,600	0/0:24,0:24:51.16:0,51,1070	0/0:11,0:11:30.09:0,30,618	0/0:18,0:18:42.13:0,42,865	0/0:25,0:25:45.08:0,45,899	0/0:13,0:13:33.09:0,33,626	0/0:19,0:19:54.18:0,54,1123	0/0:18,0:18:51.16:0,51,1076	0/0:3,0:3:6.02:0,6,132
chr10	107433869	.	CG	C	113.26	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.104;DP=602;FS=6.411;HRun=5;HaplotypeScore=59.8302;InbreedingCoeff=0.9139;MQ=76.74;MQ0=0;MQRankSum=-2.275;QD=16.18;ReadPosRankSum=0.963;VQSLOD=2.9619;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,1508	1/1:1,6:7:18.05:204,18,0	0/0:17,0:17:40.94:0,41,524	0/0:18,0:18:47.74:0,48,604	0/0:16,0:16:45.11:0,45,590	0/0:12,0:12:36.11:0,36,476	0/0:33,0:33:99:0,99,1288	0/0:26,0:26:63.20:0,63,847	0/0:21,0:21:63.17:0,63,810	0/0:18,0:18:45.15:0,45,614	0/0:11,0:11:30.10:0,30,410	0/0:29,0:29:84.27:0,84,1131	0/0:14,0:14:42.14:0,42,568	0/0:23,0:23:63.18:0,63,826	0/0:17,0:17:45.14:0,45,599	0/0:19,0:19:51.17:0,51,697	0/0:35,0:35:99:0,99,1352	0/0:25,0:25:66.22:0,66,897	0/0:29,0:29:66.15:0,66,843	0/0:6,0:6:9.03:0,9,117	0/0:66,0:66:99:0,184,2468	0/0:5,0:5:15.05:0,15,205	0/0:10,0:10:24.08:0,24,327	0/0:41,0:41:99:0,120,1625	0/0:21,0:21:57.19:0,57,779	0/0:21,0:21:45.15:0,45,607	0/0:15,0:15:45.12:0,45,579	0/0:6,0:6:18.06:0,18,246
chr10	107434124	.	GT	G	313.95	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.435;DP=575;FS=4.195;HRun=11;HaplotypeScore=67.1974;InbreedingCoeff=0.9149;MQ=78.34;MQ0=2;MQRankSum=0.972;QD=13.08;ReadPosRankSum=-1.967;VQSLOD=3.2858;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,2:36:65.82:0,66,974	1/1:2,9:11:20.84:172,21,0	0/0:43,1:33:47.09:0,47,395	0/0:29,0:21:20:0,20,212	0/0:16,0:16:44.99:0,45,445	0/0:17,0:17:42.11:0,42,448	0/0:16,2:18:20.49:0,20,423	0/0:35,2:38:45.43:0,45,868	0/0:10,0:10:27.07:0,27,288	0/0:17,0:18:44.89:0,45,431	0/0:17,0:17:42.09:0,42,441	1/1:2,11:13:32.87:262,33,0	0/0:10,1:12:5.28:0,5,237	0/0:13,0:13:35.92:0,36,354	0/0:11,0:11:30.04:0,30,303	0/0:14,0:14:39.10:0,39,416	0/0:54,2:56:99:0,107,1506	0/0:29,0:29:80.77:0,81,804	0/0:24,0:24:27.44:0,27,463	0/0:18,0:19:44.90:0,45,432	0/0:12,0:12:21.05:0,21,224	0/0:10,0:11:20.19:0,20,242	0/0:16,0:16:33.07:0,33,342	0/0:5,0:5:12.03:0,12,128	0/0:20,1:21:29.44:0,29,497	0/0:28,1:30:44.36:0,44,654	0/0:18,0:18:48.10:0,48,500	0/0:15,0:15:45.06:0,45,459
chr10	107434546	.	TTGTG	T	822.07	PASS	AB=0.778;AC=22;AF=0.458;AN=48;BaseQRankSum=1.589;DP=377;FS=8.048;HRun=0;HaplotypeScore=68.7494;InbreedingCoeff=0.0694;MQ=57.57;MQ0=16;MQRankSum=0.555;QD=3.77;ReadPosRankSum=0.779;VQSLOD=0.3320;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,2:20:34.64:35,0,36	0/1:3,1:4:11.44:40,0,11	./.	./.	0/0:12,0:14:2.74:0,3,12	0/0:18,3:21:11.57:0,12,70	./.	0/1:21,0:21:0:0,0,0	1/1:11,3:15:3:46,3,0	0/0:17,0:16:12.42:0,12,118	0/0:4,0:3:6.02:0,6,140	1/1:8,0:8:2.97:45,3,0	0/1:10,4:15:6.66:138,0,7	0/1:6,2:9:45.12:78,0,45	0/0:9,0:11:4.30:0,4,17	0/1:12,2:14:34.36:34,0,397	0/1:16,6:23:20.26:84,0,20	1/1:16,5:23:15.55:298,16,0	1/1:17,0:20:5.04:34,5,0	1/1:7,0:11:3.47:29,3,0	./.	0/1:2,0:6:0.13:0,0,0	0/0:8,0:7:2.80:0,3,13	0/1:4,1:10:36.95:37,0,42	0/1:8,1:10:6.44:40,0,6	0/0:17,0:17:14.78:0,15,163	1/1:2,0:3:3:28,3,0	0/0:21,0:20:27.04:0,27,407
chr10	107434911	.	CTT	C	188.04	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=4.256;DP=651;FS=0.000;HRun=6;HaplotypeScore=72.9678;InbreedingCoeff=0.7697;MQ=76.83;MQ0=0;MQRankSum=0.154;QD=8.18;ReadPosRankSum=1.463;VQSLOD=-0.6026;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,139,2404	1/1:1,7:8:21.07:280,21,0	0/0:17,0:17:33.11:0,33,593	0/1:15,0:14:0.77:1,0,568	0/0:19,0:19:42.59:0,43,701	0/0:19,0:19:48.16:0,48,864	0/0:22,0:22:63.22:0,63,1121	0/0:24,0:24:66.22:0,66,1162	0/0:20,0:20:54.19:0,54,972	0/0:24,0:24:60.14:0,60,991	0/0:17,0:17:51.14:0,51,885	0/0:31,0:31:81.27:0,81,1426	0/0:17,0:17:45.14:0,45,781	0/0:12,0:12:36.12:0,36,643	0/0:32,0:32:90.29:0,90,1583	0/0:33,0:33:93.30:0,93,1604	0/0:47,0:47:99:0,135,2355	0/0:22,0:22:63.15:0,63,1069	0/0:29,0:29:84.29:0,84,1509	0/0:9,0:9:24.08:0,24,428	0/0:26,0:26:75.26:0,75,1349	0/0:18,0:17:45.15:0,45,781	0/0:12,0:12:36.12:0,36,648	0/0:38,0:38:99:0,108,1916	0/0:16,0:16:45.15:0,45,782	0/0:29,0:29:87.26:0,87,1454	0/0:33,0:33:96.33:0,96,1720	0/0:12,0:11:27.09:0,27,467
chr10	107437989	.	AGT	A	1105.33	PASS	AB=0.893;AC=24;AF=0.480;AN=50;BaseQRankSum=7.561;DP=663;FS=1.223;HRun=0;HaplotypeScore=79.9215;InbreedingCoeff=-0.2055;MQ=72.32;MQ0=15;MQRankSum=0.753;QD=2.59;ReadPosRankSum=0.646;VQSLOD=1.8808;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:41:11.88:0,12,296	1/1:8,0:10:5.68:28,6,0	./.	./.	0/1:14,0:14:8.50:8,0,114	0/1:18,0:17:8.07:8,0,263	0/1:25,2:27:50.65:51,0,98	1/1:22,0:22:2.15:24,2,0	0/1:15,1:17:13.93:14,0,326	0/1:25,1:25:14.85:15,0,124	./.	0/0:22,5:27:9.22:0,9,448	0/1:12,2:14:44.63:45,0,203	0/1:17,4:21:9.05:9,0,220	0/1:22,3:24:41.61:42,0,241	0/1:28,5:33:86.24:86,0,448	0/1:28,4:32:77.06:77,0,112	0/1:24,1:24:5.74:6,0,311	1/1:9,4:13:12.01:120,12,0	1/1:15,2:18:2.42:220,2,0	1/1:37,15:52:21.06:230,21,0	0/1:14,4:18:18.30:18,0,145	0/0:13,0:13:21.06:0,21,290	0/0:48,0:48:80.77:0,81,1078	0/0:20,0:20:33.07:0,33,427	0/1:12,3:15:41.63:42,0,226	0/1:17,9:27:17.93:218,0,18	0/0:12,0:12:0.85:0,1,140
chr10	107439710	.	AG	A	493.38	PASS	AB=0.857;AC=25;AF=0.893;AN=28;BaseQRankSum=-2.336;DP=44;FS=12.788;HRun=5;HaplotypeScore=8.3937;InbreedingCoeff=0.0322;MQ=98.13;MQ0=0;MQRankSum=-2.216;QD=14.51;ReadPosRankSum=-0.659;VQSLOD=0.8443;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:6.02:67,6,0	./.	0/0:3,0:2:0.47:0,0,1	0/1:5,1:4:8.09:15,0,8	./.	./.	1/1:1,0:1:3.01:34,3,0	1/1:1,0:1:0.47:1,0,0	1/1:0,3:3:3:25,3,0	1/1:2,0:2:3:27,3,0	./.	./.	./.	./.	1/1:0,3:3:5.89:66,6,0	1/1:1,1:2:3.01:33,3,0	1/1:3,0:3:3.01:34,3,0	./.	./.	1/1:2,0:2:6.02:68,6,0	1/1:7,0:7:12.03:136,12,0	1/1:0,1:1:3.01:33,3,0	./.	./.	1/1:0,1:1:3.01:34,3,0	./.	./.	./.
chr10	107440273	.	GAC	G	194.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.462;DP=623;FS=9.041;HRun=0;HaplotypeScore=74.5164;InbreedingCoeff=0.9177;MQ=76.99;MQ0=0;MQRankSum=-1.566;QD=24.35;ReadPosRankSum=0.646;VQSLOD=3.5753;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:78.27:0,78,1348	1/1:0,8:8:21.07:287,21,0	0/0:15,0:15:37.36:0,37,572	0/0:14,0:14:28.06:0,28,332	0/0:7,0:7:18.06:0,18,319	0/0:12,0:12:36.12:0,36,626	0/0:42,0:42:99:0,105,1839	0/0:15,0:15:42.14:0,42,733	0/0:24,0:24:72.25:0,72,1263	0/0:20,0:20:54.18:0,54,926	0/0:8,0:8:21.06:0,21,321	0/0:48,0:48:99:0,126,2195	0/0:17,0:17:48.14:0,48,816	0/0:37,0:37:99:0,108,1856	0/0:24,0:24:69.24:0,69,1212	0/0:24,0:24:69.24:0,69,1195	0/0:40,0:40:99:0,108,1845	0/0:46,0:46:99:0,129,2269	0/0:16,0:16:33.08:0,33,516	0/0:8,0:8:24.08:0,24,414	0/0:74,0:74:99:0,202,3405	0/0:8,0:8:18.53:0,19,316	0/0:9,0:9:24.06:0,24,383	0/0:30,0:30:81.28:0,81,1395	0/0:17,0:17:36.12:0,36,615	0/0:10,0:10:24.08:0,24,426	0/0:15,0:15:39.13:0,39,680	0/0:3,0:3:9.03:0,9,160
chr10	107440498	.	T	TGCGCGCGCGCGC	270.18	PASS	AB=0.600;AC=1;AF=0.018;AN=56;BaseQRankSum=0.709;DP=620;FS=6.516;HRun=0;HaplotypeScore=187.4525;InbreedingCoeff=0.2345;MQ=49.02;MQ0=31;MQRankSum=-2.553;QD=7.51;ReadPosRankSum=0.636;VQSLOD=1.6845;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:27:66.14:0,66,2092	0/0:11,0:9:0.47:0,0,1	0/0:16,0:4:12:0,12,318	0/0:20,0:10:27.09:0,27,885	0/0:13,0:10:18.06:0,18,541	0/0:21,0:21:52.73:0,53,1811	0/0:31,0:29:72.22:0,72,2490	0/0:30,0:30:90.30:0,90,2869	0/0:10,0:9:24.08:0,24,844	0/0:30,0:28:81.17:0,81,2501	0/0:6,0:6:9.03:0,9,278	0/1:12,19:34:99:344,0,162	0/0:22,0:22:57.18:0,57,1967	0/0:20,0:19:42.13:0,42,1446	0/0:14,0:13:23.31:0,23,913	0/0:17,0:17:42.14:0,42,1596	0/0:34,0:33:84.21:0,84,2663	0/0:38,0:33:91.48:0,91,2961	0/0:27,0:25:72.24:0,72,1966	0/0:7,0:6:9.90:0,10,241	0/0:75,0:68:71.72:0,72,1958	0/0:13,0:13:33.07:0,33,933	0/0:11,0:11:21.07:0,21,783	0/0:33,0:31:78.27:0,78,2941	0/0:11,0:9:12.03:0,12,307	0/0:26,0:25:70.78:0,71,2477	0/0:8,0:8:21.07:0,21,640	0/0:10,0:8:21.07:0,21,794
chr10	107440524	.	TGCGCGCGCGCGCGCGCGCGC	T	205.18	PASS	AB=0.888;AC=4;AF=0.080;AN=50;BaseQRankSum=-2.662;DP=526;FS=1.868;HRun=0;HaplotypeScore=246.3581;InbreedingCoeff=-0.1016;MQ=48.30;MQ0=32;MQRankSum=-6.504;QD=2.50;ReadPosRankSum=-6.574;VQSLOD=0.9909;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:32:80.95:0,81,5920	./.	./.	./.	0/0:12,0:9:9.03:0,9,633	0/0:16,0:16:39.13:0,39,2752	0/0:30,0:28:75.26:0,75,5039	0/1:18,0:20:48.59:49,0,259	0/0:9,0:8:21.07:0,21,1267	0/0:23,0:22:45.58:0,46,3198	0/0:5,0:5:6.02:0,6,261	0/1:25,0:24:99:172,0,140	0/0:9,4:13:16.40:0,16,348	0/1:9,4:14:76.32:76,0,288	0/0:15,0:14:27.91:0,28,1398	0/0:12,0:12:26.16:0,26,1335	0/0:34,0:32:54.08:0,54,4945	0/0:46,0:40:99:0,107,7218	0/1:20,0:17:13.89:14,0,1150	0/0:6,1:6:6.61:0,7,486	0/0:60,0:53:56.94:0,57,2955	0/0:14,0:14:24.05:0,24,1277	0/0:11,1:11:12.04:0,12,683	0/0:34,0:32:87.30:0,87,4957	0/0:15,0:13:15.05:0,15,834	0/0:30,0:28:69.24:0,69,4771	0/0:9,0:9:25.88:0,26,691	0/0:8,0:6:15.05:0,15,1059
chr10	107440621	.	CATCT	C	137.83	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.887;DP=713;FS=4.927;HRun=0;HaplotypeScore=140.6833;InbreedingCoeff=0.8699;MQ=69.70;MQ0=0;MQRankSum=-3.052;QD=34.46;ReadPosRankSum=-0.485;VQSLOD=3.0929;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:90.27:0,90,2262	1/1:0,4:4:12.04:224,12,0	0/0:10,0:10:23.82:0,24,479	0/0:19,0:19:54.14:0,54,1198	0/0:12,0:12:24.08:0,24,628	0/0:28,0:28:72.22:0,72,1775	0/0:33,0:33:93.28:0,93,2279	0/0:28,0:28:81.28:0,81,2091	0/0:15,0:15:39.13:0,39,1017	0/0:26,0:26:72.25:0,72,1872	0/0:14,0:14:36.12:0,36,946	0/0:43,0:43:90.20:0,90,2295	0/0:37,0:37:84.29:0,84,2181	0/0:28,0:28:63.09:0,63,1647	0/0:28,0:28:75.26:0,75,1991	0/0:28,0:28:78.20:0,78,1920	0/0:46,0:46:99:0,126,3184	0/0:29,0:29:87.30:0,87,2276	0/0:22,0:21:54.19:0,54,1339	0/0:10,0:10:30.10:0,30,738	0/0:74,0:74:99:0,202,5226	0/0:19,0:19:54.19:0,54,1413	0/0:11,0:11:30.10:0,30,792	0/0:43,0:43:99:0,114,2993	0/0:19,0:19:51.09:0,51,1226	0/0:30,0:30:78.27:0,78,2024	0/0:18,0:18:45.15:0,45,1153	0/0:2,0:2:6.02:0,6,153
chr10	107440794	.	CGGGAGCCT	C	852.57	PASS	AB=1.000;AC=7;AF=0.167;AN=42;BaseQRankSum=4.999;DP=488;FS=0.000;HRun=0;HaplotypeScore=62.5732;InbreedingCoeff=0.3933;MQ=31.79;MQ0=194;MQRankSum=-4.319;QD=10.03;ReadPosRankSum=1.012;VQSLOD=1.5190;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:22:3.01:0,3,126	./.	./.	0/0:10,0:1:3.01:0,3,106	./.	0/0:14,0:10:3.01:0,3,126	0/0:24,0:14:21.07:0,21,704	0/0:13,0:9:21.07:0,21,856	0/0:22,0:14:2.59:0,3,126	0/0:17,0:7:9.03:0,9,378	./.	1/1:12,17:23:37.37:941,37,0	0/0:21,0:16:11.46:0,11,468	0/0:19,0:13:2.54:0,3,123	0/0:23,0:18:5.69:0,6,249	0/0:19,0:16:11.26:0,11,503	./.	./.	0/0:14,0:9:12.04:0,12,505	0/0:5,0:3:6.02:0,6,233	0/1:34,0:13:0:0,0,0	1/1:13,0:8:0.47:1,0,0	0/0:11,0:5:6.02:0,6,199	0/0:25,0:12:3.32:0,3,114	1/1:9,0:5:0.47:1,0,0	0/0:17,0:12:24.08:0,24,974	0/0:16,0:11:24.08:0,24,946	./.
chr10	107442015	.	C	CTTCT	373.97	PASS	AB=0.944;AC=7;AF=0.125;AN=56;BaseQRankSum=4.987;DP=627;FS=6.143;HRun=0;HaplotypeScore=137.1723;InbreedingCoeff=0.1132;MQ=74.98;MQ0=16;MQRankSum=-4.776;QD=2.65;ReadPosRankSum=-3.477;VQSLOD=0.3669;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:90.23:0,90,934	0/0:8,0:8:5.83:0,6,32	0/0:29,0:18:40.99:0,41,355	0/0:38,0:26:41.25:0,41,474	0/0:24,0:24:47.97:0,48,463	0/0:11,0:11:24:0,24,298	0/0:29,0:30:75.50:0,75,957	0/1:27,0:27:32.91:33,0,456	0/0:15,0:18:47.98:0,48,675	0/0:24,0:24:65.53:0,66,729	0/0:10,0:10:24.02:0,24,306	1/1:4,12:21:6.91:128,7,0	0/0:21,0:21:50.50:0,50,550	0/0:17,0:20:49.01:0,49,550	0/0:23,0:23:48.26:0,48,529	0/0:20,0:22:54.04:0,54,637	0/0:24,0:23:62.85:0,63,696	0/0:22,0:22:57.48:0,57,792	0/1:21,0:19:29.15:29,0,316	0/1:17,0:17:5.65:6,0,240	0/1:19,1:28:90.90:91,0,243	0/0:18,0:17:1.04:0,1,190	0/0:13,0:13:27.75:0,28,235	0/0:25,0:26:25.83:0,26,889	0/0:15,0:18:35.62:0,36,396	0/0:22,0:22:49.21:0,49,486	0/1:24,0:24:99:214,0,202	0/0:17,0:15:41.26:0,41,375
chr10	107442492	.	A	ACACTC	601.53	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.832;DP=645;FS=3.222;HRun=0;HaplotypeScore=119.6713;InbreedingCoeff=0.9973;MQ=82.41;MQ0=0;MQRankSum=-4.734;QD=50.13;ReadPosRankSum=0.929;VQSLOD=4.0833;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,169,3536	1/1:3,9:12:24.08:695,24,0	0/0:20,0:20:54.11:0,54,1029	0/0:19,0:19:45.15:0,45,867	0/0:17,0:17:48.16:0,48,1003	0/0:17,0:17:48.15:0,48,982	0/0:23,0:23:66.23:0,66,1406	0/0:32,0:32:75.21:0,75,1536	0/0:19,0:19:54.15:0,54,1070	0/0:22,0:22:63.20:0,63,1253	0/0:13,0:13:36.11:0,36,727	0/0:23,0:23:66.23:0,66,1407	0/0:22,0:22:60.21:0,60,1259	0/0:26,0:26:69.20:0,69,1423	0/0:24,0:24:66.23:0,66,1406	0/0:24,0:24:69.24:0,69,1470	0/0:25,0:25:72.25:0,72,1516	0/0:23,0:23:69.24:0,69,1440	0/0:27,0:27:81.27:0,81,1658	0/0:20,0:20:60.19:0,60,1220	0/0:42,0:42:99:0,114,2346	0/0:16,0:16:45.12:0,45,877	0/0:17,0:17:48.16:0,48,1023	0/0:26,0:26:78.27:0,78,1660	0/0:10,0:10:30.10:0,30,640	0/0:27,0:27:78.27:0,78,1663	0/0:24,0:24:69.24:0,69,1431	0/0:15,0:15:45.15:0,45,917
chr10	107445273	.	GACT	G	208.10	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.519;DP=598;FS=0.000;HRun=0;HaplotypeScore=85.3403;InbreedingCoeff=0.9875;MQ=81.93;MQ0=0;MQRankSum=-2.451;QD=20.81;ReadPosRankSum=0.715;VQSLOD=3.2110;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,2193	1/1:2,8:10:17.11:298,17,0	0/0:20,0:20:42.14:0,42,936	0/0:20,0:20:48.12:0,48,969	0/0:18,0:18:54.19:0,54,1204	0/0:12,0:12:30.10:0,30,674	0/0:25,0:25:75.26:0,75,1690	0/0:28,0:28:81.28:0,81,1813	0/0:22,0:22:66.23:0,66,1489	0/0:12,0:12:36.12:0,36,766	0/0:14,0:14:39.13:0,39,853	0/0:29,0:29:84.29:0,84,1860	0/0:20,0:20:60.21:0,60,1324	0/0:22,0:22:66.23:0,66,1490	0/0:20,0:20:54.19:0,54,1216	0/0:27,0:27:81.28:0,81,1828	0/0:32,0:32:93.32:0,93,2094	0/0:25,0:25:72.21:0,72,1546	0/0:16,0:16:45.15:0,45,1015	0/0:10,0:10:27.09:0,27,610	0/0:49,0:49:99:0,135,3014	0/0:20,0:20:57.20:0,57,1260	0/0:10,0:10:30.10:0,30,671	0/0:39,0:39:99:0,114,2554	0/0:12,0:12:36.12:0,36,816	0/0:19,0:19:57.20:0,57,1272	0/0:19,0:19:51.18:0,51,1153	0/0:14,0:14:36.12:0,36,788
chr10	107447354	.	G	GA	1586.09	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.937;DP=734;FS=2.094;HRun=1;HaplotypeScore=69.8196;InbreedingCoeff=0.9993;MQ=74.07;MQ0=0;MQRankSum=-2.976;QD=37.76;ReadPosRankSum=3.015;VQSLOD=4.3771;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1486	1/1:0,9:9:27.09:404,27,0	0/0:15,0:15:42.12:0,42,515	0/0:16,0:16:48.15:0,48,610	0/0:20,0:20:57.19:0,57,740	0/0:25,0:25:72.20:0,72,904	0/0:30,0:30:90.25:0,90,1137	0/0:28,0:28:72.23:0,72,923	0/0:25,0:24:75.23:0,75,958	0/0:27,0:27:78.23:0,78,968	0/0:12,0:12:36.09:0,36,438	1/1:0,33:33:87.77:1303,88,0	0/0:21,0:21:63.20:0,63,816	0/0:17,0:17:51.15:0,51,648	0/0:42,0:42:99:0,123,1525	0/0:44,0:43:99:0,129,1660	0/0:34,0:34:99:0,99,1285	0/0:23,0:23:66.21:0,66,854	0/0:29,0:29:78.24:0,78,1000	0/0:30,0:30:87.26:0,87,1101	0/0:48,0:48:99:0,141,1803	0/0:29,0:29:84.27:0,84,1090	0/0:15,0:15:42.12:0,42,528	0/0:33,0:33:99:0,99,1253	0/0:24,0:24:72.18:0,72,879	0/0:30,0:30:90.29:0,90,1168	0/0:23,0:22:69.22:0,69,894	0/0:13,0:13:39.13:0,39,502
chr10	107447607	.	TG	T	17166.39	PASS	AB=0.702;AC=54;AF=0.964;AN=56;BaseQRankSum=-2.604;DP=631;FS=9.602;HRun=6;HaplotypeScore=65.0179;InbreedingCoeff=-0.0127;MQ=70.26;MQ0=1;MQRankSum=-3.388;QD=27.21;ReadPosRankSum=3.441;VQSLOD=5.1337;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,31:38:78.32:999,78,0	1/1:1,4:5:12.03:129,12,0	0/1:3,9:12:4.13:260,0,4	0/1:4,1:5:17.37:17,0,87	1/1:4,11:14:36.09:385,36,0	1/1:4,17:21:54.13:579,54,0	1/1:4,31:35:90.22:967,90,0	1/1:4,22:26:63.09:656,63,0	1/1:4,22:26:63.16:676,63,0	1/1:1,19:20:57.14:612,57,0	1/1:0,13:13:36.09:387,36,0	1/1:3,30:33:81.20:870,81,0	1/1:0,19:19:57.14:612,57,0	1/1:3,24:27:63.06:677,63,0	1/1:1,27:28:78.20:838,78,0	1/1:1,29:30:78.20:838,78,0	1/1:3,34:37:90.23:967,90,0	1/1:0,33:33:93.23:1000,93,0	1/1:6,23:29:75.17:795,75,0	1/1:1,13:14:39.10:419,39,0	1/1:7,40:47:99:1161,108,0	1/1:2,21:23:57.14:613,57,0	1/1:1,12:13:36.09:387,36,0	1/1:2,21:23:57.14:613,57,0	1/1:3,14:17:39.10:419,39,0	1/1:1,16:17:48.12:516,48,0	1/1:0,16:16:48.12:516,48,0	1/1:0,9:9:24.06:258,24,0
chr10	107447613	.	GT	G	3804.85	PASS	AB=0.995;AC=47;AF=0.839;AN=56;BaseQRankSum=8.401;DP=624;FS=2.652;HRun=1;HaplotypeScore=111.0867;InbreedingCoeff=0.0222;MQ=71.04;MQ0=1;MQRankSum=-3.441;QD=6.17;ReadPosRankSum=11.193;VQSLOD=-0.5925;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:34.88:253,35,0	1/1:4,0:4:10.55:46,11,0	0/1:12,0:12:27.67:28,0,44	0/0:7,0:7:13.81:0,14,196	1/1:13,1:13:8.21:118,8,0	1/1:17,1:18:42.89:171,43,0	1/1:34,0:34:6.25:176,6,0	0/1:27,1:28:57.99:117,0,58	1/1:25,1:26:13.03:187,13,0	0/1:21,0:21:19.77:86,0,20	1/1:13,0:13:28.57:108,29,0	0/1:35,0:35:44.58:171,0,45	0/1:23,0:23:19.78:103,0,20	1/1:24,0:24:50.98:209,51,0	1/1:28,0:28:38.06:181,38,0	1/1:32,0:32:17.57:176,18,0	1/1:34,0:34:71.73:256,72,0	0/1:37,0:37:5.08:175,0,5	1/1:25,1:26:25.69:145,26,0	0/1:16,0:16:11.07:85,0,11	1/1:42,0:42:62.34:269,62,0	1/1:23,0:23:2.46:138,2,0	1/1:13,0:13:28.83:106,29,0	1/1:23,0:23:4.44:108,4,0	1/1:14,0:14:32.21:124,32,0	1/1:17,0:17:8.85:85,9,0	1/1:17,0:17:16.81:109,17,0	1/1:9,0:9:19.94:76,20,0
chr10	107448072	.	CCT	C	101.54	PASS	AB=0.903;AC=6;AF=0.107;AN=56;BaseQRankSum=5.358;DP=641;FS=3.010;HRun=0;HaplotypeScore=89.9861;InbreedingCoeff=0.2294;MQ=85.91;MQ0=3;MQRankSum=-1.690;QD=1.66;ReadPosRankSum=-0.907;VQSLOD=1.8684;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,3:44:33.26:0,33,1544	1/1:2,5:7:12.04:150,12,0	0/0:44,0:35:68.62:0,69,850	0/0:45,0:33:17.16:0,17,515	0/1:15,1:16:10.43:10,0,369	0/0:12,0:12:24.08:0,24,396	0/0:16,0:16:30.10:0,30,495	0/0:23,0:23:48.16:0,48,791	0/0:22,1:23:31.69:0,32,1027	0/0:16,1:17:4.77:0,5,565	0/0:13,0:13:19.14:0,19,435	0/0:30,2:32:46.72:0,47,1249	0/1:16,2:18:29.94:30,0,550	0/0:29,0:30:73.99:0,74,1292	0/0:22,0:22:60.19:0,60,966	0/0:15,0:15:39.12:0,39,618	0/0:48,0:48:99:0,120,1953	0/0:27,0:27:66.20:0,66,1054	0/0:16,0:16:36.11:0,36,569	0/0:7,0:7:18.02:0,18,290	0/0:41,0:41:73.70:0,74,1447	0/0:14,0:14:33.10:0,33,514	0/0:21,1:22:16.66:0,17,771	0/0:33,1:34:43.75:0,44,1250	0/0:13,0:13:27.09:0,27,446	0/1:14,1:15:7.42:7,0,358	0/0:22,0:22:57.19:0,57,940	0/1:4,1:5:25.44:25,0,129
chr10	107448361	.	CT	C	1008.81	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.768;DP=658;FS=16.456;HRun=2;HaplotypeScore=69.2074;InbreedingCoeff=0.9914;MQ=81.19;MQ0=0;MQRankSum=-3.504;QD=34.79;ReadPosRankSum=1.776;VQSLOD=2.2381;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1914	1/1:0,5:5:15.05:195,15,0	0/0:16,0:16:38.95:0,39,538	0/0:25,0:25:59.75:0,60,940	0/0:17,0:17:48.16:0,48,713	0/0:20,0:20:57.17:0,57,816	0/0:32,0:32:93.30:0,93,1371	0/0:26,0:26:72.22:0,72,1052	0/0:20,0:20:60.19:0,60,879	0/0:24,0:24:72.24:0,72,1063	0/0:10,0:10:30.09:0,30,431	1/1:1,23:24:72.23:933,72,0	0/0:19,0:19:57.19:0,57,854	0/0:32,0:32:93.32:0,93,1394	0/0:32,0:32:96.31:0,96,1402	0/0:32,0:32:96.32:0,96,1421	0/0:37,0:37:99:0,108,1546	0/0:24,0:24:72.20:0,72,1052	0/0:23,0:23:63.17:0,63,869	0/0:17,0:17:51.14:0,51,716	0/0:28,0:28:84.28:0,84,1258	0/0:26,0:26:75.19:0,75,1059	0/0:27,0:27:75.25:0,75,1123	0/0:27,0:26:81.26:0,81,1195	0/0:13,0:13:39.13:0,39,582	0/0:25,0:25:72.24:0,72,1078	0/0:19,0:19:57.19:0,57,854	0/0:13,0:13:39.13:0,39,584
chr10	107448413	.	CCGGCTCTGTTCCT	C	2035.27	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.989;DP=595;FS=4.630;HRun=0;HaplotypeScore=213.5034;InbreedingCoeff=0.9849;MQ=79.52;MQ0=0;MQRankSum=-6.647;QD=88.49;ReadPosRankSum=3.034;VQSLOD=2.9985;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,105,5772	0/0:9,0:9:21.07:0,21,1208	0/0:13,0:13:30.10:0,30,981	0/0:17,0:17:39.13:0,39,1858	0/0:13,0:13:33.10:0,33,1543	0/0:18,0:18:54.19:0,54,2529	0/0:26,0:26:75.26:0,75,4678	0/0:25,0:25:66.21:0,66,3130	0/0:21,0:21:63.22:0,63,3864	0/0:26,0:26:63.22:0,63,3195	0/0:15,0:15:33.11:0,33,1631	1/1:5,18:23:54.19:2130,54,0	0/0:18,0:18:54.19:0,54,3452	0/0:30,0:30:90.27:0,90,5536	0/0:28,0:28:78.25:0,78,4711	0/0:25,0:25:75.24:0,75,4481	0/0:38,0:38:99:0,102,6028	0/0:26,0:26:78.25:0,78,4933	0/0:20,0:20:60.21:0,60,2613	0/0:7,0:7:18.04:0,18,811	0/0:32,0:32:84.27:0,84,4429	0/0:16,0:16:42.14:0,42,1950	0/0:16,0:16:36.11:0,36,1512	0/0:35,0:35:99:0,105,6447	0/0:9,0:9:24.07:0,24,1252	0/0:16,0:16:45.14:0,45,2315	0/0:16,0:16:45.15:0,45,2932	0/0:17,0:17:51.18:0,51,2599
chr10	107448862	.	A	AGCC	61.38	PASS	AC=6;AF=0.75;AN=8;BaseQRankSum=0.751;DP=11;FS=0.000;HRun=0;HaplotypeScore=51.2564;MQ=26.40;MQ0=0;MQRankSum=0.751;QD=6.82;ReadPosRankSum=0.751;VQSLOD=1.8500;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:8.75:50,9,0	./.	./.	0/0:1,0:2:1.25:0,1,3	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,1:1:2.92:17,3,0	./.	./.	./.	./.	./.	./.	1/1:0,5:5:11.60:64,12,0	./.	./.	./.	./.	./.	./.	./.
chr10	107456136	.	AC	A	122.13	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.548;DP=562;FS=1.322;HRun=7;HaplotypeScore=71.5481;InbreedingCoeff=0.8232;MQ=82.49;MQ0=0;MQRankSum=-2.330;QD=12.21;ReadPosRankSum=-0.511;VQSLOD=2.6560;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:60.17:0,60,727	1/1:2,8:10:21.05:214,21,0	0/0:20,0:20:51.14:0,51,603	0/0:18,0:18:44.62:0,45,474	0/0:15,0:15:42.13:0,42,527	0/0:19,0:19:51.16:0,51,642	0/0:23,0:23:63.20:0,63,790	0/0:20,0:20:43.81:0,44,261	0/0:21,0:21:57.18:0,57,717	0/0:16,0:16:42.10:0,42,512	0/0:12,0:12:29.98:0,30,364	0/0:30,0:30:82.93:0,83,622	0/0:16,0:16:42.13:0,42,525	0/0:24,0:24:63.18:0,63,765	0/0:23,0:22:63.20:0,63,792	0/0:16,0:16:45.14:0,45,566	0/0:50,0:50:99:0,144,1786	0/0:22,0:22:60.19:0,60,755	0/0:22,0:22:50.68:0,51,368	0/0:14,0:14:2.71:0,3,135	0/0:39,0:39:99:0,107,760	0/0:6,0:6:18.06:0,18,227	0/0:15,0:15:39.12:0,39,489	0/0:19,0:19:51.16:0,51,642	0/0:16,0:16:45.13:0,45,552	0/0:23,0:23:66.20:0,66,818	0/0:17,0:15:39.65:0,40,288	0/0:9,0:9:15.05:0,15,189
chr10	107458716	.	A	AG	3025.95	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.403;DP=690;FS=0.738;HRun=6;HaplotypeScore=80.9356;InbreedingCoeff=0.9987;MQ=78.45;MQ0=0;MQRankSum=2.324;QD=18.12;ReadPosRankSum=-0.404;VQSLOD=3.2448;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,105,1061	1/1:2,8:10:24.08:302,24,0	0/0:19,0:19:32.99:0,33,386	0/0:20,0:20:21.06:0,21,350	0/0:23,0:23:57.12:0,57,577	0/0:25,0:25:66.11:0,66,658	0/0:23,0:23:60.10:0,60,597	1/1:24,0:24:62.15:409,62,0	0/0:30,0:30:75.14:0,75,752	0/0:24,0:24:53.76:0,54,550	0/0:16,0:16:39.08:0,39,397	1/1:2,21:23:54.17:679,54,0	0/0:28,0:28:72.13:0,72,726	0/0:29,0:29:81.18:0,81,824	0/0:27,0:27:78.17:0,78,795	0/0:29,0:29:81.17:0,81,820	0/0:27,0:27:72.14:0,72,726	0/0:38,0:38:99:0,105,1055	1/1:14,0:14:35.52:234,36,0	1/1:17,1:18:38.72:289,39,0	1/1:56,0:56:99:878,122,0	0/0:23,0:23:60.12:0,60,605	0/0:11,0:11:30.07:0,30,306	0/0:26,0:26:75.17:0,75,765	0/0:24,0:24:60.13:0,60,612	0/0:25,0:25:66.14:0,66,673	1/1:22,0:22:56.69:433,57,0	0/0:17,0:17:48.09:0,48,482
chr10	107458717	.	G	GT	5205.03	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-6.345;DP=696;FS=2.487;HRun=0;HaplotypeScore=72.9016;InbreedingCoeff=0.8687;MQ=78.88;MQ0=0;MQRankSum=2.643;QD=30.26;ReadPosRankSum=0.483;VQSLOD=4.6853;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1558	0/1:11,0:11:24.23:60,0,24	0/0:19,0:19:53.42:0,53,637	0/0:21,0:21:39.23:0,39,601	0/0:22,0:22:60.19:0,60,818	0/0:25,0:25:66.22:0,66,915	0/0:24,0:24:69.15:0,69,904	1/1:0,24:24:69.20:1008,69,0	0/0:28,0:28:84.20:0,84,1113	0/0:22,0:22:62.80:0,63,830	0/0:16,0:16:48.09:0,48,608	1/1:24,0:24:3.83:170,4,0	0/0:28,0:28:81.16:0,81,1067	0/0:30,0:30:87.27:0,87,1184	0/0:26,0:26:78.26:0,78,1090	0/0:30,0:30:87.25:0,87,1176	0/0:27,0:27:78.23:0,78,1054	0/0:39,0:39:99:0,114,1529	1/1:0,14:14:42.11:593,42,0	1/1:1,18:19:47.90:624,48,0	1/1:1,57:58:99:1882,123,0	0/0:23,0:23:69.17:0,69,908	0/0:11,0:11:30.10:0,30,415	0/0:26,0:26:78.25:0,78,1074	0/0:23,0:23:66.20:0,66,890	0/0:27,0:27:75.22:0,75,1000	1/1:0,22:22:57.19:869,57,0	0/0:17,0:17:48.16:0,48,668
chr10	107459131	.	A	ATCCT	12240.87	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-10.971;DP=1020;FS=2.613;HRun=0;HaplotypeScore=177.9211;InbreedingCoeff=0.9994;MQ=79.42;MQ0=0;MQRankSum=-5.277;QD=44.67;ReadPosRankSum=-1.256;VQSLOD=4.8828;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,144,2359	0/0:12,0:12:36.12:0,36,625	0/0:31,0:31:72.19:0,72,1131	0/0:32,0:32:43.68:0,44,900	0/0:16,0:16:45.11:0,45,688	0/0:32,0:32:72.23:0,72,1216	0/0:43,0:43:99:0,102,1709	1/1:20,35:56:99:2212,105,0	0/0:34,0:34:84.29:0,84,1458	0/0:48,0:48:99:0,132,2123	0/0:25,0:25:63.16:0,63,1001	1/1:7,55:65:99:3934,157,0	0/0:47,0:47:99:0,123,2021	0/0:37,0:37:93.32:0,93,1608	0/0:52,0:52:99:0,129,2180	0/0:34,0:34:84.26:0,84,1394	0/0:36,0:36:75.22:0,75,1241	0/0:31,0:31:72.20:0,72,1192	1/1:17,11:28:35.86:820,36,0	1/1:7,15:23:35.92:648,36,0	1/1:14,67:82:99:3888,158,0	0/0:38,0:38:90.21:0,90,1417	0/0:13,0:13:24.06:0,24,389	0/0:53,0:53:99:0,130,2262	0/0:18,0:18:42.12:0,42,675	0/0:39,0:39:90.28:0,90,1534	1/1:6,12:20:30.06:739,30,0	0/0:18,0:18:45.05:0,45,690
chr10	107459510	.	C	CTCT	6959.46	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.936;DP=664;FS=9.504;HRun=0;HaplotypeScore=91.5289;InbreedingCoeff=0.9995;MQ=90.53;MQ0=0;MQRankSum=-2.692;QD=44.33;ReadPosRankSum=1.190;VQSLOD=6.4929;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,114,1679	0/0:14,0:14:36.12:0,36,547	0/0:23,0:23:51.17:0,51,752	0/0:29,0:29:60.07:0,60,833	0/0:19,0:19:48.16:0,48,720	0/0:15,0:15:42.14:0,42,630	0/0:29,0:29:78.26:0,78,1167	1/1:8,29:37:84.27:1667,84,0	0/0:18,0:18:45.15:0,45,676	0/0:29,0:28:63.19:0,63,886	0/0:15,0:15:42.13:0,42,618	1/1:4,27:32:66.23:1399,66,0	0/0:21,0:21:42.14:0,42,638	0/0:23,0:23:66.22:0,66,983	0/0:28,0:28:81.27:0,81,1220	0/0:12,0:12:33.08:0,33,452	0/0:17,0:17:42.12:0,42,608	0/0:27,0:27:66.20:0,66,961	1/1:8,15:23:45.15:886,45,0	1/1:4,11:15:30.06:591,30,0	1/1:2,24:27:66.23:1399,66,0	0/0:32,0:32:81.24:0,81,1205	0/0:13,0:13:27.09:0,27,410	0/0:33,0:33:87.26:0,87,1270	0/0:25,0:25:69.23:0,69,1049	0/0:31,0:31:87.28:0,87,1292	1/1:4,19:23:48.09:1017,48,0	0/0:10,0:10:30.10:0,30,456
chr10	107459962	.	TC	T	761.89	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.425;DP=573;FS=0.685;HRun=7;HaplotypeScore=58.0033;InbreedingCoeff=0.7718;MQ=72.52;MQ0=1;MQRankSum=0.910;QD=24.58;ReadPosRankSum=0.146;VQSLOD=3.8579;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:78.21:0,78,953	0/0:5,0:5:15.05:0,15,189	0/0:18,0:16:4.50:0,5,193	0/0:10,0:10:4.79:0,5,167	0/0:17,0:17:48.11:0,48,553	0/0:22,0:22:66.18:0,66,789	0/0:26,0:26:60.19:0,60,754	0/0:23,0:23:42.10:0,42,488	0/0:12,0:12:36.12:0,36,453	0/0:9,0:9:21.05:0,21,243	0/0:13,0:13:24.02:0,24,283	1/1:2,29:31:84.19:857,84,0	0/0:25,0:25:66.21:0,66,825	0/0:25,0:25:69.20:0,69,851	0/0:41,0:41:99:0,114,1397	0/0:22,0:22:51.13:0,51,604	0/0:40,0:40:99:0,120,1481	0/0:18,0:18:54.17:0,54,679	0/0:23,0:23:54.11:0,54,637	0/0:17,0:17:51.13:0,51,624	0/0:30,0:30:78.24:0,78,964	0/0:15,0:15:42.13:0,42,527	0/0:9,0:9:27.09:0,27,340	0/0:22,0:22:60.15:0,60,736	0/0:15,0:15:36.11:0,36,451	0/0:19,0:19:48.15:0,48,602	0/0:25,0:25:69.22:0,69,863	0/0:10,0:10:30.09:0,30,372
chr10	107460319	.	T	TGG	5597.47	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-8.585;DP=626;FS=1.301;HRun=1;HaplotypeScore=74.8007;InbreedingCoeff=0.9908;MQ=90.15;MQ0=0;MQRankSum=-1.804;QD=50.89;ReadPosRankSum=-1.757;VQSLOD=4.3096;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,1976	0/0:4,0:4:12.04:0,12,184	0/0:23,0:23:60.43:0,60,865	0/0:25,0:25:69.20:0,69,976	0/0:11,0:11:33.09:0,33,482	0/0:30,0:30:90.29:0,90,1356	0/0:29,0:29:87.26:0,87,1288	1/1:5,16:21:60.21:1135,60,0	0/0:21,0:21:60.19:0,60,898	0/0:22,0:22:60.20:0,60,919	0/0:11,0:11:33.11:0,33,505	0/0:31,0:31:93.32:0,93,1419	0/0:19,0:19:51.17:0,51,781	0/0:28,0:28:78.26:0,78,1194	0/0:20,0:20:60.20:0,60,918	0/0:25,0:25:72.24:0,72,1103	0/0:31,0:31:87.29:0,87,1329	0/0:26,0:26:75.25:0,75,1149	1/1:4,19:23:60.21:1159,60,0	1/1:0,12:12:36.12:695,36,0	1/1:1,37:38:96.33:1855,96,0	0/0:25,0:25:75.25:0,75,1147	0/0:15,0:15:42.14:0,42,643	0/0:28,0:28:84.27:0,84,1264	0/0:14,0:14:42.14:0,42,643	0/0:28,0:28:81.27:0,81,1222	1/1:0,14:16:39.13:754,39,0	0/0:6,0:6:18.06:0,18,276
chr10	107462097	.	T	TC	6599.77	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=1.549;DP=695;FS=1.975;HRun=0;HaplotypeScore=72.8971;InbreedingCoeff=0.9938;MQ=89.50;MQ0=0;MQRankSum=-2.427;QD=42.86;ReadPosRankSum=-1.837;VQSLOD=4.6852;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,1729	0/0:4,0:4:12.04:0,12,168	0/0:24,0:24:69.10:0,69,917	0/0:28,1:29:72.08:0,72,863	0/0:32,0:32:96.31:0,96,1326	0/0:34,0:34:99:0,99,1352	0/0:33,0:33:99:0,99,1351	1/1:2,24:26:72.21:1100,72,0	0/0:19,0:19:57.18:0,57,781	0/0:33,0:33:96.31:0,96,1315	0/0:20,0:20:57.17:0,57,779	1/1:1,25:26:69.24:1102,69,0	0/0:25,0:25:75.25:0,75,1048	0/0:26,0:26:78.26:0,78,1091	0/0:27,0:27:81.26:0,81,1117	0/0:22,0:22:66.19:0,66,901	0/0:33,0:33:99:0,99,1382	0/0:23,0:23:69.23:0,69,964	1/1:1,30:31:90.31:1427,90,0	1/1:1,25:26:66.22:1054,66,0	1/1:0,25:25:63.21:1007,63,0	0/0:16,0:16:48.15:0,48,656	0/0:19,0:19:57.18:0,57,780	0/0:20,0:20:60.13:0,60,784	0/0:14,0:14:42.13:0,42,572	0/0:24,0:24:66.22:0,66,919	1/1:0,20:20:57.19:910,57,0	0/0:22,0:22:66.21:0,66,905
chr10	107462393	.	ACCTCC	A	2386.99	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.445;DP=631;FS=2.496;HRun=0;HaplotypeScore=138.5366;InbreedingCoeff=0.9913;MQ=79.59;MQ0=0;MQRankSum=-10.829;QD=33.15;ReadPosRankSum=-1.278;VQSLOD=3.2669;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,175,5563	0/0:10,0:10:30.10:0,30,942	0/0:21,0:21:56.56:0,57,1634	0/0:17,0:15:39.13:0,39,1131	0/0:19,0:19:57.20:0,57,1838	0/0:29,0:29:81.28:0,81,2617	0/0:25,0:25:72.24:0,72,2243	1/1:7,18:25:54.18:901,54,0	0/0:20,0:20:57.18:0,57,1765	0/0:28,0:28:84.29:0,84,2640	0/0:16,0:16:45.15:0,45,1454	0/0:27,0:27:78.27:0,78,1760	0/0:21,0:21:63.22:0,63,2032	0/0:30,0:30:87.30:0,87,2679	0/0:41,0:41:99:0,117,3676	0/0:25,0:25:75.25:0,75,2329	0/0:38,0:38:99:0,114,3621	0/0:21,0:21:63.22:0,63,2036	1/1:5,9:14:30.09:464,30,0	1/1:4,11:15:33.11:540,33,0	1/1:1,4:5:11.96:149,12,0	0/0:15,0:15:45.15:0,45,1441	0/0:12,0:12:36.12:0,36,1104	0/0:24,0:24:69.22:0,69,2145	0/0:19,0:19:57.20:0,57,1793	0/0:36,0:36:99:0,108,3449	1/1:2,11:13:30.10:507,30,0	0/0:7,0:7:21.07:0,21,678
chr10	107462396	.	T	TC	951.48	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.392;DP=610;FS=1.622;HRun=3;HaplotypeScore=89.1042;InbreedingCoeff=0.8492;MQ=80.59;MQ0=0;MQRankSum=-2.629;QD=35.24;ReadPosRankSum=1.404;VQSLOD=4.1131;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,159,1881	0/0:10,0:10:27.08:0,27,324	0/0:21,0:21:45.19:0,45,591	0/0:17,0:15:36.04:0,36,398	0/0:19,0:19:57.13:0,57,667	0/0:28,0:28:84.22:0,84,991	0/0:24,0:24:69.20:0,69,816	0/0:18,0:18:35.52:0,36,112	0/0:19,0:19:45.09:0,45,523	0/0:29,0:29:75.19:0,75,874	0/0:15,0:15:45.14:0,45,540	1/1:1,26:27:75.25:1046,75,0	0/0:21,0:21:57.17:0,57,682	0/0:28,0:28:75.13:0,75,865	0/0:39,0:39:99:0,105,1243	0/0:26,0:26:69.20:0,69,816	0/0:40,0:40:99:0,117,1361	0/0:22,0:22:66.20:0,66,791	0/0:9,0:9:19.98:0,20,63	0/0:11,0:11:24.42:0,24,77	0/0:4,0:4:2.89:0,3,11	0/0:16,0:16:42.01:0,42,448	0/0:13,0:13:33.10:0,33,395	0/0:22,0:22:63.16:0,63,732	0/0:18,0:18:51.16:0,51,612	0/0:37,0:37:99:0,108,1280	0/0:12,0:12:22.20:0,22,70	0/0:8,0:8:21.06:0,21,252
chr10	107462400	.	GGAGGGGA	G	3004.42	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.668;DP=592;FS=1.813;HRun=0;HaplotypeScore=154.3727;InbreedingCoeff=0.9914;MQ=80.56;MQ0=0;MQRankSum=-10.991;QD=55.64;ReadPosRankSum=-1.360;VQSLOD=3.6558;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,160,6449	0/0:9,0:9:27.07:0,27,999	0/0:19,0:19:54.16:0,54,1851	0/0:18,0:16:39.13:0,39,1311	0/0:19,0:19:54.19:0,54,2173	0/0:28,0:28:84.29:0,84,3405	0/0:28,0:28:84.29:0,84,3256	1/1:2,16:18:48.64:1046,49,0	0/0:14,0:14:42.14:0,42,1583	0/0:25,0:25:72.24:0,72,2856	0/0:15,0:15:45.15:0,45,1841	0/0:28,0:28:81.28:0,81,2973	0/0:21,0:21:60.21:0,60,2363	0/0:26,0:26:72.21:0,72,2699	0/0:36,0:36:99:0,108,4227	0/0:24,0:24:72.25:0,72,2847	0/0:40,0:40:99:0,120,4827	0/0:22,0:22:66.23:0,66,2701	1/1:0,10:10:30.10:609,30,0	1/1:0,11:11:33.11:693,33,0	1/1:0,4:4:11.90:182,12,0	0/0:15,0:15:33.11:0,33,1350	0/0:11,0:11:33.11:0,33,1327	0/0:20,0:20:57.20:0,57,2335	0/0:17,0:17:51.18:0,51,2080	0/0:40,0:40:99:0,120,4745	1/1:0,11:11:30.10:648,30,0	0/0:8,0:8:24.08:0,24,904
chr10	107463946	.	T	TC	1114.97	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.437;DP=684;FS=7.221;HRun=2;HaplotypeScore=73.0828;InbreedingCoeff=0.9850;MQ=93.22;MQ0=0;MQRankSum=-3.800;QD=33.79;ReadPosRankSum=0.226;VQSLOD=3.6531;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:36:98.34:0,98,1196	0/0:9,0:9:27.08:0,27,333	0/0:32,0:32:82.10:0,82,980	0/0:26,1:27:16.22:0,16,658	0/0:16,0:16:42.10:0,42,495	0/0:18,0:18:54.17:0,54,669	0/0:23,0:23:63.18:0,63,768	0/0:27,0:27:75.22:0,75,909	0/0:30,0:30:90.28:0,90,1116	0/0:27,0:27:81.25:0,81,1004	0/0:8,0:8:24.08:0,24,298	1/1:2,31:33:84.28:1210,84,0	0/0:23,0:23:66.19:0,66,806	0/0:37,0:37:99:0,108,1305	0/0:32,0:32:93.28:0,93,1140	0/0:30,0:30:84.23:0,84,1016	0/0:30,0:30:87.21:0,87,1036	0/0:26,0:26:75.23:0,75,927	0/0:24,0:24:66.20:0,66,811	0/0:20,0:20:57.18:0,57,707	0/0:35,0:35:99:0,102,1251	0/0:18,0:18:48.15:0,48,595	0/0:17,0:17:51.16:0,51,632	0/0:17,0:17:45.14:0,45,557	0/0:15,0:15:42.13:0,42,521	0/0:31,0:31:93.28:0,93,1141	0/0:27,0:27:75.24:0,75,929	0/0:16,0:16:48.15:0,48,595
chr10	107465316	.	C	CT	7661.62	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-9.604;DP=781;FS=1.382;HRun=1;HaplotypeScore=75.3125;InbreedingCoeff=1.0000;MQ=79.52;MQ0=0;MQRankSum=0.334;QD=39.90;ReadPosRankSum=-1.312;VQSLOD=4.9124;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:61:99:0,181,2319	0/0:14,0:14:42.11:0,42,515	0/0:22,0:22:63.17:0,63,787	0/0:21,0:21:42.10:0,42,481	0/0:33,0:33:96.30:0,96,1232	0/0:14,0:14:42.14:0,42,545	0/0:27,0:27:81.25:0,81,1036	1/1:2,26:28:75.25:1125,75,0	0/0:25,0:25:66.21:0,66,857	0/0:30,0:30:87.28:0,87,1117	0/0:18,0:18:54.16:0,54,686	1/1:2,36:38:99:1523,102,0	0/0:17,0:17:48.16:0,48,622	0/0:31,0:31:87.28:0,87,1129	0/0:31,0:31:90.29:0,90,1169	0/0:42,0:42:99:0,123,1594	0/0:32,0:32:93.30:0,93,1206	0/0:31,0:30:87.28:0,87,1130	1/1:2,18:20:54.16:787,54,0	1/1:1,31:32:81.27:1214,81,0	1/1:0,50:50:99:2024,135,0	0/0:21,0:21:60.19:0,60,778	0/0:23,0:23:69.22:0,69,894	0/0:32,0:32:93.30:0,93,1205	0/0:19,0:19:54.16:0,54,688	0/0:22,0:22:66.21:0,66,845	1/1:1,23:24:66.22:989,66,0	0/0:22,0:22:60.19:0,60,777
chr10	107465540	.	TA	T	1664.37	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.555;DP=560;FS=38.982;HRun=12;HaplotypeScore=67.4635;InbreedingCoeff=0.9767;MQ=71.70;MQ0=3;MQRankSum=-0.516;QD=15.55;ReadPosRankSum=-1.293;VQSLOD=1.4448;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:65.94:0,66,645	0/0:3,0:14:31.37:0,31,162	0/0:27,0:19:23.90:0,24,206	0/0:24,0:18:18.94:0,19,194	0/0:24,0:25:27.88:0,28,436	0/0:19,0:19:45.08:0,45,452	0/0:11,0:12:32.88:0,33,311	1/1:6,15:21:41.79:322,42,0	0/0:17,0:18:44.88:0,45,426	0/0:30,1:31:57.92:0,58,764	0/0:19,0:19:45.08:0,45,451	0/0:1,0:11:22.73:0,23,114	0/0:11,1:12:13.06:0,13,257	0/0:15,1:16:30.06:0,30,304	0/0:20,1:21:24.21:0,24,420	0/0:16,0:16:39.08:0,39,396	0/0:28,0:28:78.12:0,78,776	0/0:18,0:18:27.73:0,28,387	1/1:4,23:26:10.82:446,11,0	1/1:3,26:29:71.69:557,72,0	1/1:3,5:8:14.93:116,15,0	0/0:9,0:9:24.05:0,24,243	0/0:11,0:13:29.73:0,30,272	0/0:15,0:15:39.06:0,39,389	0/0:31,0:31:75.09:0,75,746	0/0:27,0:27:44.64:0,45,613	1/1:2,20:22:50.80:395,51,0	0/0:22,0:22:57.11:0,57,579
chr10	107466192	.	TG	T	638.54	PASS	AB=0.883;AC=12;AF=0.214;AN=56;BaseQRankSum=8.231;DP=494;FS=18.057;HRun=10;HaplotypeScore=66.5581;InbreedingCoeff=0.2856;MQ=75.71;MQ0=1;MQRankSum=-1.295;QD=4.15;ReadPosRankSum=3.780;VQSLOD=0.1121;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:29:16:0,16,379	0/1:7,0:7:7.78:8,0,133	0/0:10,0:10:21.97:0,22,208	0/0:20,0:16:7.32:0,7,104	0/1:10,3:13:34.03:34,0,106	0/1:17,3:20:36.01:36,0,299	0/0:23,0:23:21.16:0,21,425	0/0:15,0:15:15.02:0,15,152	0/0:11,1:12:10.01:0,10,315	0/0:14,0:14:15.04:0,15,165	0/0:9,0:10:14.86:0,15,140	1/1:5,0:32:55.76:168,56,0	1/1:4,16:20:17.70:373,18,0	1/1:10,7:17:14.93:130,15,0	0/0:21,1:22:34.10:0,34,573	0/0:25,0:25:51.09:0,51,528	0/0:30,1:31:43.09:0,43,673	0/0:28,2:30:52.07:0,52,751	0/1:6,2:9:33.75:34,0,96	0/0:17,0:17:33.07:0,33,351	0/0:29,3:32:5.03:0,5,504	0/0:12,1:13:1.44:0,1,212	0/0:7,0:7:15.03:0,15,157	0/1:24,3:26:2.34:2,0,380	0/1:8,1:9:11.02:11,0,118	0/0:5,0:5:3.01:0,3,33	0/0:15,1:16:4.01:0,4,264	0/0:9,0:9:21.06:0,21,232
chr10	107468856	.	A	AAGCT	8402.22	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-13.931;DP=797;FS=0.373;HRun=0;HaplotypeScore=123.3211;InbreedingCoeff=0.9984;MQ=65.29;MQ0=1;MQRankSum=-4.612;QD=57.16;ReadPosRankSum=-0.894;VQSLOD=6.0331;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,2504	0/0:15,0:15:42.13:0,42,754	0/0:13,0:13:21:0,21,492	0/0:17,0:17:22.90:0,23,531	0/0:19,0:19:57.18:0,57,1026	0/0:22,0:22:60.19:0,60,1056	0/0:28,0:28:81.22:0,81,1378	1/1:3,17:20:54.15:1282,54,0	0/0:44,0:44:99:0,129,2329	0/0:29,0:29:81.27:0,81,1481	0/0:22,0:22:65.94:0,66,1126	0/0:46,0:46:99:0,135,2478	0/0:29,0:29:78.20:0,78,1356	0/0:33,0:33:96.32:0,96,1737	0/0:43,0:43:99:0,120,2086	0/0:44,0:44:99:0,123,2142	0/0:42,0:42:99:0,123,2263	0/0:18,0:18:54.19:0,54,1008	1/1:1,20:23:63.11:1418,63,0	1/1:2,15:18:36.12:957,36,0	1/1:5,41:48:99:2591,99,0	0/0:21,0:21:57.18:0,57,1015	0/0:18,0:18:51.13:0,51,832	0/0:34,0:34:96.24:0,96,1641	0/0:30,0:30:90.28:0,90,1577	0/0:20,0:20:57.20:0,57,1060	1/1:4,30:36:81.28:2155,81,0	0/0:16,0:16:48.14:0,48,855
chr10	107470726	.	CTGTG	C	134.70	PASS	AB=0.906;AC=11;AF=0.250;AN=44;BaseQRankSum=-1.238;DP=561;FS=2.534;HRun=0;HaplotypeScore=113.8089;InbreedingCoeff=0.0902;MQ=66.50;MQ0=30;MQRankSum=-0.363;QD=0.75;ReadPosRankSum=1.163;VQSLOD=1.7701;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:29:6.75:34,0,7	0/0:8,0:8:5.17:0,5,20	./.	./.	./.	1/1:13,0:13:3.01:41,3,0	0/0:25,0:25:0:0,0,0	./.	0/1:13,2:15:15.95:26,0,16	0/0:23,0:23:6:0,6,74	./.	0/0:19,0:17:2.93:0,3,61	0/0:17,0:17:2.29:0,2,6	1/1:25,0:27:2.22:7,2,0	0/0:12,1:13:2.74:0,3,12	0/1:18,2:20:21.77:22,0,73	0/1:28,1:26:0.55:77,0,1	0/1:19,0:20:0.65:1,0,7	0/0:25,0:23:10.79:0,11,89	0/0:11,0:11:3:0,3,28	0/0:42,0:35:2.82:0,3,30	0/0:6,2:7:0:0,0,0	0/1:8,1:10:0:0,0,0	0/0:35,0:37:11.62:0,12,57	0/0:15,0:15:5.50:0,6,32	./.	0/0:7,0:7:7.19:0,7,48	0/1:12,1:11:23.21:36,0,23
chr10	107470881	.	CTG	C	3768.81	PASS	AB=0.756;AC=13;AF=0.232;AN=56;BaseQRankSum=12.389;DP=879;FS=1.682;HRun=0;HaplotypeScore=175.8974;InbreedingCoeff=0.6665;MQ=60.98;MQ0=9;MQRankSum=-5.638;QD=12.78;ReadPosRankSum=-1.801;VQSLOD=3.4046;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,111,1780	0/1:7,10:18:32.28:267,0,32	0/0:51,0:27:22.75:0,23,262	0/0:53,0:29:16.07:0,16,148	0/0:25,1:26:16.68:0,17,744	0/0:22,0:22:56.98:0,57,897	0/1:32,3:34:8.82:9,0,918	0/1:36,19:54:40.82:514,0,41	0/0:29,0:29:60.12:0,60,928	0/0:30,0:30:75.24:0,75,1177	0/0:13,0:13:24.08:0,24,396	1/1:7,26:39:50.64:884,51,0	0/0:23,0:23:54.17:0,54,863	0/0:41,0:41:99:0,108,1683	0/0:34,0:34:93.30:0,93,1496	0/0:31,2:33:9.20:0,9,1120	0/0:25,1:26:37.73:0,38,1125	0/0:18,0:18:44.50:0,44,674	1/1:10,13:23:17.89:357,18,0	1/1:15,7:27:13.56:208,14,0	1/1:6,52:65:80.76:1078,81,0	0/0:24,0:24:45.15:0,45,733	0/0:13,0:13:30.10:0,30,495	0/0:53,0:53:99:0,123,1921	0/0:17,1:18:4.63:0,5,579	0/0:25,0:25:54.18:0,54,877	1/1:9,10:24:38.88:453,39,0	0/0:7,0:7:18.53:0,19,291
chr10	107473045	.	TG	T	3484.42	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.581;DP=653;FS=3.247;HRun=7;HaplotypeScore=72.1757;InbreedingCoeff=0.9588;MQ=76.58;MQ0=1;MQRankSum=1.035;QD=27.65;ReadPosRankSum=0.322;VQSLOD=4.3750;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,129,1582	0/0:1,0:2:2.84:0,3,14	0/0:33,0:24:19.93:0,20,439	0/0:22,0:20:32.87:0,33,360	0/0:27,0:27:78.23:0,78,957	0/0:28,0:28:75.16:0,75,922	0/0:25,0:25:75.23:0,75,929	1/1:2,30:32:90.17:908,90,0	0/0:14,0:14:39.12:0,39,490	0/0:25,0:25:63.20:0,63,793	0/0:16,0:16:42.13:0,42,527	0/0:29,0:29:78.19:0,78,947	0/0:17,0:17:48.12:0,48,566	0/0:19,0:19:54.16:0,54,665	0/0:27,0:27:81.26:0,81,1010	0/0:24,0:24:69.16:0,69,826	0/0:19,0:19:54.17:0,54,676	0/0:22,0:22:63.14:0,63,763	1/1:1,23:24:69.07:672,69,0	1/1:2,21:23:60.04:589,60,0	1/1:1,24:25:66.15:673,66,0	0/0:29,0:29:81.19:0,81,993	0/0:22,0:21:57.14:0,57,685	0/0:28,0:28:78.24:0,78,969	0/0:18,0:18:54.17:0,54,676	0/0:25,0:25:48.29:0,48,838	1/1:1,21:22:63.14:642,63,0	0/0:8,0:8:24.08:0,24,301
chr10	107473489	.	C	CTA	2168.10	PASS	AB=0.769;AC=13;AF=0.232;AN=56;BaseQRankSum=10.967;DP=536;FS=10.962;HRun=0;HaplotypeScore=112.3020;InbreedingCoeff=0.8755;MQ=69.78;MQ0=1;MQRankSum=-11.092;QD=31.42;ReadPosRankSum=-1.675;VQSLOD=5.1035;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,105,1684	1/1:1,0:1:3.01:55,3,0	0/0:23,0:19:48.15:0,48,756	0/0:17,0:14:41.87:0,42,592	0/0:20,0:20:57.19:0,57,927	0/0:13,0:13:39.13:0,39,636	0/0:29,0:28:84.23:0,84,1310	1/1:11,0:11:27.05:350,27,0	0/0:22,0:22:60.20:0,60,978	0/0:20,0:20:57.18:0,57,905	0/0:15,0:15:42.14:0,42,685	1/1:12,1:13:36.11:554,36,0	0/0:23,0:23:66.21:0,66,1053	0/0:15,0:15:45.15:0,45,727	0/0:21,0:21:63.22:0,63,1028	0/0:34,0:34:99:0,102,1641	0/0:39,0:39:99:0,117,1883	0/0:23,0:23:66.23:0,66,1075	1/1:7,2:10:30.08:491,30,0	1/1:11,0:11:21.07:280,21,0	0/1:7,2:10:6.86:153,0,7	0/0:10,0:10:27.09:0,27,440	0/0:20,0:20:57.19:0,57,929	0/0:32,0:32:93.32:0,93,1515	0/0:22,0:22:66.23:0,66,1076	0/0:26,0:26:75.24:0,75,1197	1/1:12,1:13:35.83:468,36,0	0/0:4,0:4:12.02:0,12,165
chr10	107475355	.	CAATGAATGAATGAATGAATG	C	8547.01	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.324;DP=720;FS=26.661;HRun=0;HaplotypeScore=362.8599;InbreedingCoeff=0.9977;MQ=63.78;MQ0=1;MQRankSum=-6.105;QD=53.75;ReadPosRankSum=-1.231;VQSLOD=2.6555;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,108,8649	1/1:2,11:13:23.65:1170,24,0	0/0:20,0:20:27.09:0,27,946	0/0:19,0:15:21.07:0,21,1465	0/0:34,0:34:81.26:0,81,5804	0/0:30,0:31:81.28:0,81,6365	0/0:24,0:24:45.12:0,45,2872	1/1:9,13:22:39.12:616,39,0	0/0:27,0:27:63.22:0,63,5268	0/0:31,0:31:66.22:0,66,4388	0/0:19,0:19:48.15:0,48,3609	1/1:7,31:38:45.15:2429,45,0	0/0:24,0:25:72.25:0,72,5105	0/0:30,0:30:78.27:0,78,6147	0/0:23,0:23:54.19:0,54,4679	0/0:30,0:30:72.18:0,72,4684	0/0:29,0:29:69.17:0,69,5495	0/0:24,0:24:53.55:0,54,4400	1/1:5,16:21:31.08:1323,31,0	1/1:9,13:22:24.06:913,24,0	1/1:18,0:18:23.92:316,24,0	0/0:20,0:20:54.17:0,54,3795	0/0:27,0:27:69.24:0,69,4702	0/0:27,0:28:72.17:0,72,5762	0/0:28,0:28:78.25:0,78,6352	0/0:33,0:33:80.08:0,80,6057	1/1:4,21:25:33.11:1781,33,0	0/0:11,0:11:33.11:0,33,2855
chr10	107477506	.	CT	C	2397.47	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.888;DP=389;FS=4.516;HRun=5;HaplotypeScore=50.4499;InbreedingCoeff=0.9025;MQ=66.97;MQ0=7;MQRankSum=-0.149;QD=23.50;ReadPosRankSum=-0.638;VQSLOD=2.2885;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:39.10:0,39,492	1/1:9,0:9:18.48:83,18,0	0/0:50,0:16:26.32:0,26,249	0/0:36,0:14:21.54:0,22,235	0/0:14,0:14:36.12:0,36,492	0/0:14,0:14:42.11:0,42,530	0/0:4,0:4:12.03:0,12,150	1/1:2,41:43:99:1262,123,0	0/0:3,0:3:9.03:0,9,123	0/0:12,0:12:36.11:0,36,467	0/0:6,0:6:18.06:0,18,246	1/1:0,8:8:9.01:84,9,0	0/0:5,0:5:15.05:0,15,203	0/0:8,0:8:21.07:0,21,286	0/0:6,0:6:18.05:0,18,229	0/0:3,0:3:9.03:0,9,123	0/0:26,0:26:75.19:0,75,971	0/0:25,0:25:68.50:0,68,928	1/1:0,9:9:26.94:273,27,0	1/1:2,8:10:24:255,24,0	1/1:1,8:9:24.07:271,24,0	0/0:3,0:3:3:0,3,25	0/0:5,0:5:15.02:0,15,172	0/0:5,0:5:6.02:0,6,80	0/0:12,0:12:36.09:0,36,459	0/0:11,0:11:30.07:0,30,368	1/1:1,13:14:33.07:363,33,0	0/0:20,0:20:60.20:0,60,819
chr10	107477510	.	T	TA	166.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.584;DP=389;FS=0.000;HRun=0;HaplotypeScore=60.6478;InbreedingCoeff=0.6166;MQ=68.92;MQ0=7;MQRankSum=0.267;QD=20.76;ReadPosRankSum=-0.213;VQSLOD=4.6755;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.13:0,42,565	1/1:0,8:8:20.70:258,21,0	0/0:53,0:15:35.65:0,36,320	0/0:41,0:15:15.89:0,16,180	0/0:12,0:12:36.12:0,36,503	0/0:14,0:14:42.14:0,42,579	0/0:4,0:4:12.04:0,12,167	0/0:44,0:44:89.92:0,90,368	0/0:3,0:3:9.03:0,9,126	0/0:13,0:13:39.12:0,39,519	0/0:6,0:6:18.06:0,18,251	0/0:8,0:8:7.24:0,7,28	0/0:5,0:5:15.05:0,15,209	0/0:8,0:8:21.07:0,21,293	0/0:6,0:6:18.06:0,18,251	0/0:4,0:4:12.03:0,12,153	0/0:27,0:27:81.25:0,81,1096	0/0:26,0:26:72.87:0,73,969	0/0:10,0:10:20.13:0,20,71	0/0:8,0:8:18.81:0,19,68	0/0:10,0:10:20.10:0,20,75	0/0:1,0:1:3.01:0,3,42	0/0:5,0:5:15.05:0,15,205	0/0:2,0:2:6.02:0,6,83	0/0:12,0:12:36.11:0,36,489	0/0:10,0:10:30.09:0,30,400	0/0:14,0:14:13.91:0,14,87	0/0:20,0:20:60.20:0,60,834
chr10	107478296	.	ATTAT	A	1981.67	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.776;DP=402;FS=0.000;HRun=0;HaplotypeScore=77.3783;InbreedingCoeff=0.9867;MQ=80.72;MQ0=1;MQRankSum=-10.827;QD=36.70;ReadPosRankSum=-0.823;VQSLOD=3.4174;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,3458	0/0:7,0:7:21.07:0,21,605	0/0:9,0:9:27.09:0,27,708	0/0:19,0:19:53.97:0,54,1305	0/0:15,0:15:45.14:0,45,1224	0/0:12,0:11:33.11:0,33,946	0/0:14,0:14:42.14:0,42,1191	1/1:0,8:8:24.08:352,24,0	0/0:16,0:16:48.16:0,48,1390	0/0:17,0:17:51.17:0,51,1375	0/0:8,0:8:24.08:0,24,694	0/0:16,0:16:48.16:0,48,1358	0/0:12,0:12:36.12:0,36,1025	0/0:17,0:17:51.18:0,51,1442	0/0:15,0:15:45.15:0,45,1267	0/0:16,0:16:48.16:0,48,1356	0/0:22,0:22:66.23:0,66,1867	0/0:19,0:19:57.20:0,57,1625	1/1:1,12:13:39.12:567,39,0	1/1:2,5:7:18.95:260,19,0	1/1:2,10:12:26.98:362,27,0	0/0:6,0:6:18.06:0,18,505	0/0:9,0:9:27.09:0,27,758	0/0:15,0:15:42.14:0,42,1191	0/0:14,0:14:42.14:0,42,1202	0/0:24,0:24:72.25:0,72,2058	1/1:0,14:14:42.14:615,42,0	0/0:4,0:4:12.04:0,12,346
chr10	107478301	.	CT	C	988.01	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.938;DP=410;FS=0.000;HRun=1;HaplotypeScore=57.8790;InbreedingCoeff=0.9877;MQ=82.84;MQ0=1;MQRankSum=-10.547;QD=19.00;ReadPosRankSum=-0.560;VQSLOD=3.4590;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1890	0/0:8,0:8:24.08:0,24,384	0/0:9,0:9:24.08:0,24,383	0/0:20,0:20:56.95:0,57,800	0/0:15,0:15:45.15:0,45,715	0/0:12,0:11:33.11:0,33,525	0/0:14,0:14:42.14:0,42,671	1/1:0,8:8:23.91:185,24,0	0/0:18,0:18:54.17:0,54,838	0/0:15,0:15:45.15:0,45,719	0/0:9,0:9:27.09:0,27,428	0/0:18,0:18:54.13:0,54,790	0/0:12,0:12:36.12:0,36,575	0/0:18,0:18:54.18:0,54,863	0/0:17,0:17:48.16:0,48,767	0/0:15,0:15:45.15:0,45,719	0/0:23,0:23:69.21:0,69,1075	0/0:20,0:20:60.19:0,60,926	1/1:1,12:13:38.92:319,39,0	1/1:0,6:6:17.89:134,18,0	1/1:1,10:11:26.82:202,27,0	0/0:7,0:7:21.07:0,21,336	0/0:10,0:10:30.10:0,30,479	0/0:14,0:14:42.14:0,42,671	0/0:15,0:15:45.15:0,45,719	0/0:25,0:25:72.25:0,72,1151	1/1:0,14:14:41.83:323,42,0	0/0:4,0:4:12:0,12,143
chr10	107479763	.	G	GA	444.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.509;DP=611;FS=2.266;HRun=1;HaplotypeScore=67.2496;InbreedingCoeff=0.9651;MQ=77.66;MQ0=0;MQRankSum=-1.326;QD=31.72;ReadPosRankSum=0.124;VQSLOD=3.2855;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:86.98:0,87,1064	1/1:0,14:14:36.12:539,36,0	0/0:11,0:12:27.08:0,27,323	0/0:12,0:13:14.20:0,14,192	0/0:20,0:20:54.17:0,54,699	0/0:22,0:22:66.21:0,66,856	0/0:20,0:20:57.16:0,57,701	0/0:28,0:28:81.23:0,81,1004	0/0:20,0:20:57.19:0,57,739	0/0:25,0:25:75.23:0,75,960	0/0:13,0:13:39.04:0,39,453	0/0:22,0:22:63.19:0,63,797	0/0:27,0:27:57.21:0,57,859	0/0:27,0:27:78.21:0,78,968	0/0:20,0:20:60.18:0,60,764	0/0:16,0:16:48.13:0,48,593	0/0:35,0:35:99:0,105,1347	0/0:44,0:44:99:0,129,1640	0/0:22,0:22:66.21:0,66,856	0/0:17,0:17:48.16:0,48,622	0/0:50,0:50:99:0,144,1737	0/0:13,0:13:39.11:0,39,489	0/0:15,0:15:42.12:0,42,529	0/0:26,0:26:78.24:0,78,997	0/0:15,0:15:45.13:0,45,568	0/0:26,0:26:78.23:0,78,984	0/0:14,0:14:42.12:0,42,530	0/0:5,0:5:15.05:0,15,194
chr10	107480538	.	CTGAGGGACACTCT	C	5379.17	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.234;DP=642;FS=3.794;HRun=0;HaplotypeScore=231.6665;InbreedingCoeff=0.9968;MQ=84.27;MQ0=0;MQRankSum=-8.506;QD=42.69;ReadPosRankSum=-2.574;VQSLOD=4.0794;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,114,6188	0/0:9,0:9:27.09:0,27,1641	0/0:29,0:30:72.24:0,72,3611	0/0:16,0:16:30.10:0,30,1411	0/0:23,0:23:54.17:0,54,3249	0/0:23,0:23:60.21:0,60,3621	0/0:30,0:30:81.28:0,81,4892	1/1:12,20:32:59.90:1135,60,0	0/0:22,0:22:54.19:0,54,2920	0/0:24,0:23:57.19:0,57,3207	0/0:10,0:10:24.08:0,24,1516	0/0:26,0:26:66.21:0,66,3507	0/0:18,0:18:51.17:0,51,3175	0/0:25,0:25:66.23:0,66,3968	0/0:21,0:21:51.16:0,51,2945	0/0:22,0:22:51.17:0,51,3097	0/0:28,0:28:69.24:0,69,4292	0/0:31,0:31:81.28:0,81,4621	1/1:11,10:20:30.06:891,30,0	1/1:8,12:20:36.12:1203,36,0	1/1:14,19:33:27.09:777,27,0	0/0:21,0:21:60.21:0,60,3667	0/0:13,0:13:33.11:0,33,1957	0/0:19,0:19:45.15:0,45,2649	0/0:30,0:30:79.51:0,80,4708	0/0:24,0:24:63.21:0,63,3795	1/1:5,15:20:36.12:1372,36,0	0/0:9,0:9:18.06:0,18,1155
chr10	107481780	.	CGTGTGCGTGTGCGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGT	C	2016.94	PASS	AB=1.000;AC=9;AF=0.173;AN=52;BaseQRankSum=6.412;DP=511;FS=0.000;HRun=0;HaplotypeScore=466.1136;InbreedingCoeff=0.5561;MQ=53.47;MQ0=21;MQRankSum=-4.709;QD=20.79;ReadPosRankSum=-2.357;VQSLOD=0.4234;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:39:92.83:0,93,9517	0/0:5,0:5:12.04:0,12,1557	./.	0/1:6,0:4:4.95:5,0,38	0/0:13,0:12:8.11:0,8,3010	0/0:15,0:13:25.90:0,26,1904	0/0:20,0:17:42.05:0,42,2641	0/1:14,0:13:25.82:404,0,26	0/0:16,0:16:42.08:0,42,4107	0/0:17,0:15:42.09:0,42,2298	0/0:8,0:8:12.04:0,12,886	0/1:16,0:15:11.96:12,0,232	0/0:16,0:14:35.62:0,36,2530	0/0:26,0:26:66.23:0,66,5839	0/0:18,0:17:42.13:0,42,4330	0/0:23,0:22:63.11:0,63,5414	0/0:32,0:31:81.17:0,81,7256	0/0:27,0:27:78.21:0,78,7043	1/1:3,20:23:59.40:999,59,0	./.	1/1:33,0:29:28.59:592,29,0	0/0:9,0:8:11.65:0,12,1248	0/0:10,0:9:18.02:0,18,2006	0/0:53,0:53:99:0,130,14707	0/0:16,0:15:36.11:0,36,4448	0/0:21,0:21:54.13:0,54,4512	1/1:5,0:4:5.97:151,6,0	0/0:5,0:5:14.94:0,15,174
chr10	107481796	.	TGC	T	182.64	PASS	AB=0.987;AC=14;AF=0.280;AN=50;BaseQRankSum=8.320;DP=507;FS=9.021;HRun=0;HaplotypeScore=103.7077;InbreedingCoeff=0.0308;MQ=51.42;MQ0=22;MQRankSum=0.222;QD=0.80;ReadPosRankSum=0.266;VQSLOD=1.4776;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:44:45.61:0,46,917	0/0:8,0:8:12.09:0,12,264	./.	./.	0/1:13,0:12:0.19:0,0,209	0/0:20,0:18:8.25:0,8,174	0/0:25,0:22:27.90:0,28,509	0/1:14,0:12:4.02:7,0,4	0/1:17,0:17:10.64:11,0,343	0/1:16,0:14:4.85:5,0,290	0/0:7,0:7:6.92:0,7,69	0/1:20,0:19:99:127,0,182	0/1:19,0:17:43.11:43,0,294	0/1:25,3:27:19.69:20,0,492	0/0:20,0:19:16.53:0,17,612	0/0:17,1:17:1.80:0,2,382	0/1:31,1:31:9.07:9,0,601	0/0:28,0:28:10.66:0,11,689	0/1:22,0:22:0.77:26,0,1	./.	1/1:21,0:17:9.41:46,9,0	0/0:10,0:9:11.94:0,12,198	0/0:10,0:9:6.13:0,6,145	0/0:58,0:58:79.83:0,80,1580	0/0:13,0:12:3.92:0,4,277	0/1:24,0:24:8.32:8,0,385	1/1:2,0:1:2.90:16,3,0	0/0:1,0:1:1.25:0,1,3
chr10	107481798	.	CGT	C	639.70	PASS	AB=0.911;AC=19;AF=0.413;AN=46;BaseQRankSum=3.899;DP=518;FS=0.598;HRun=0;HaplotypeScore=103.2007;InbreedingCoeff=-0.4591;MQ=51.01;MQ0=26;MQRankSum=-0.976;QD=1.63;ReadPosRankSum=1.574;VQSLOD=2.0043;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,5:45:79.13:79,0,658	0/1:7,1:8:15.22:15,0,136	./.	./.	0/1:11,2:12:48.50:48,0,140	0/1:17,4:18:58.99:59,0,117	0/0:22,3:22:0.32:0,0,409	1/1:3,0:12:2.74:12,3,0	0/1:16,2:18:36.44:36,0,303	0/0:16,0:15:22.59:0,23,295	0/0:7,0:7:1.36:0,1,91	0/1:19,1:19:12.24:12,0,163	0/1:16,2:16:70.35:70,0,219	0/1:27,0:26:39.61:40,0,226	0/0:22,0:20:3.29:0,3,377	0/1:14,4:17:99:103,0,242	0/1:25,5:30:95.56:96,0,395	0/1:26,4:30:78.62:79,0,434	1/1:22,0:22:0.47:1,0,0	./.	0/1:22,0:17:0:0,0,0	0/0:11,0:10:12.04:0,12,181	0/1:10,0:9:24.22:24,0,81	0/1:56,3:59:48.68:49,0,1165	0/1:13,1:13:45.47:45,0,170	0/0:23,0:23:15.70:0,16,308	./.	./.
chr10	107481802	.	T	TGC	160.27	PASS	AB=0.944;AC=5;AF=0.100;AN=50;BaseQRankSum=2.153;DP=550;FS=2.605;HRun=0;HaplotypeScore=124.0565;InbreedingCoeff=0.0520;MQ=50.04;MQ0=32;MQRankSum=0.421;QD=2.86;ReadPosRankSum=-0.326;VQSLOD=2.7106;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,1:45:9.01:0,9,839	0/0:7,0:7:5.33:0,5,45	./.	./.	0/0:11,0:10:20.51:0,21,210	0/1:21,1:19:17.76:18,0,248	0/0:28,0:25:57.26:0,57,648	0/0:15,0:12:5.63:0,6,33	0/0:19,0:19:47.52:0,48,505	0/0:16,0:15:42.59:0,43,436	0/1:6,1:7:34.65:35,0,114	0/0:20,0:19:31.97:0,32,224	0/0:18,0:16:32.16:0,32,370	0/0:28,0:27:62.03:0,62,566	0/0:23,0:21:52.25:0,52,603	0/0:17,0:16:41.03:0,41,421	0/0:32,0:31:35.72:0,36,768	0/1:26,0:26:99:204,0,413	0/0:22,0:22:17.32:0,17,101	./.	0/0:32,0:27:4.73:0,5,75	0/0:12,0:11:15.04:0,15,207	0/0:10,0:9:14.92:0,15,159	0/0:56,3:60:43.14:0,43,1549	0/0:16,0:15:32.45:0,32,326	0/0:26,0:26:27.57:0,28,594	0/0:6,0:5:0.96:0,1,13	1/1:1,0:1:0.89:2,1,0
chr10	107482097	.	C	CA	1592.02	PASS	AB=0.822;AC=11;AF=0.196;AN=56;BaseQRankSum=-6.266;DP=594;FS=4.207;HRun=12;HaplotypeScore=74.3271;InbreedingCoeff=0.4128;MQ=65.21;MQ0=1;MQRankSum=0.645;QD=8.56;ReadPosRankSum=-2.637;VQSLOD=2.3111;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:50,1:56:95.22:0,95,823	0/0:9,0:9:17.87:0,18,131	0/0:7,0:7:4.07:0,4,12	0/1:11,0:11:25.74:26,0,36	0/0:11,0:12:31.86:0,32,225	0/0:12,0:14:25.87:0,26,180	0/1:26,2:31:22.20:22,0,282	0/1:17,21:38:15.57:492,0,16	0/0:21,0:22:44.92:0,45,315	0/0:23,0:24:61.68:0,62,443	0/0:10,0:10:23.85:0,24,175	0/0:22,0:22:47.66:0,48,350	0/0:20,0:20:32.68:0,33,240	0/1:16,1:18:3.41:3,0,133	0/0:13,0:13:2.56:0,3,151	0/0:14,0:14:26.77:0,27,197	0/0:37,0:39:78.55:0,79,557	0/0:31,0:34:48.82:0,49,454	0/1:5,12:18:5.07:248,0,5	1/1:4,10:14:8.09:228,8,0	1/1:5,18:24:29.01:430,29,0	0/0:16,0:16:29.77:0,30,219	0/0:17,0:17:31.02:0,31,238	0/0:31,0:31:68.50:0,69,503	0/0:17,0:18:37.80:0,38,268	0/0:21,2:23:12.49:0,12,255	1/1:9,22:32:12.50:298,12,0	0/0:5,0:5:8.93:0,9,66
chr10	107482200	.	C	CTG	482.14	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.999;DP=803;FS=6.910;HRun=0;HaplotypeScore=114.9257;InbreedingCoeff=0.9684;MQ=60.80;MQ0=16;MQRankSum=0.623;QD=17.22;ReadPosRankSum=-1.838;VQSLOD=3.1005;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:60:99:0,135,1598	0/0:9,0:9:21.05:0,21,242	0/0:56,0:24:13.78:0,14,315	0/0:66,0:33:23.53:0,24,304	0/0:18,0:18:44.71:0,45,506	0/0:24,0:25:56.99:0,57,657	0/0:27,0:27:66.18:0,66,781	0/0:29,0:29:40.65:0,41,529	0/0:19,0:19:42.11:0,42,496	0/0:28,0:27:34.90:0,35,613	0/0:13,0:13:33.10:0,33,398	1/1:17,11:28:36.05:577,36,0	0/0:20,0:20:51.16:0,51,618	0/0:23,0:24:53.98:0,54,620	0/0:24,0:25:56.97:0,57,643	0/0:18,0:19:41.96:0,42,486	0/0:34,0:37:90.37:0,90,1030	0/0:27,0:28:68.67:0,69,772	0/0:21,0:22:41.95:0,42,476	0/0:18,0:18:33.08:0,33,377	0/0:62,0:63:99:0,129,1503	0/0:19,0:19:39.10:0,39,456	0/0:24,0:25:54:0,54,631	0/0:52,0:52:99:0,138,1669	0/0:18,0:18:42.13:0,42,509	0/0:28,0:28:63.19:0,63,763	0/0:18,0:17:33.10:0,33,399	0/0:8,0:8:21.06:0,21,254
chr10	107482664	.	A	AAG	1373.22	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-1.210;DP=506;FS=29.956;HRun=0;HaplotypeScore=87.9253;InbreedingCoeff=0.9174;MQ=67.42;MQ0=14;MQRankSum=-1.389;QD=11.84;ReadPosRankSum=-3.636;VQSLOD=1.1081;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:50.67:0,51,401	1/1:1,6:7:11.65:110,12,0	0/0:34,0:13:9.65:0,10,118	0/0:27,0:9:2.05:0,2,33	0/0:16,0:16:22.85:0,23,170	0/0:19,0:19:15.51:0,16,277	0/0:14,0:14:22.20:0,22,179	1/1:24,0:24:35.90:299,36,0	0/0:9,0:9:17.99:0,18,153	0/0:11,0:11:17.97:0,18,151	0/0:16,0:15:23.41:0,23,174	1/1:18,0:17:23.58:182,24,0	0/0:16,0:16:22.90:0,23,175	0/0:10,0:10:11.98:0,12,101	0/0:10,0:10:11.99:0,12,104	0/0:9,0:9:8.68:0,9,64	0/0:39,0:39:49.07:0,49,395	0/0:27,0:25:25.12:0,25,170	1/1:24,0:22:43.23:366,43,0	1/1:14,0:14:27.95:202,28,0	1/1:14,0:14:29.01:208,29,0	0/0:19,0:19:36.60:0,37,296	0/0:15,0:15:29.98:0,30,255	0/0:17,0:15:19.94:0,20,138	0/0:18,0:18:28.02:0,28,208	0/0:25,0:25:38.77:0,39,321	1/1:14,0:14:26.79:200,27,0	0/0:15,0:13:21.20:0,21,141
chr10	107483499	.	C	CAGTAAGACCAGAAAT	13646.42	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-3.462;DP=573;FS=12.568;HRun=0;HaplotypeScore=220.0726;InbreedingCoeff=0.9865;MQ=97.54;MQ0=0;MQRankSum=-12.682;QD=110.95;ReadPosRankSum=-3.148;VQSLOD=2.9601;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,5097	0/0:3,0:3:9.03:0,9,319	0/0:35,0:35:99:0,102,3522	0/0:28,0:28:72.19:0,72,2410	0/0:14,0:14:42.13:0,42,1696	0/0:23,0:23:66.21:0,66,2705	0/0:24,0:24:72.23:0,72,2734	1/1:6,2:22:54.16:2302,54,0	0/0:32,0:32:90.28:0,90,3528	0/0:14,0:14:39.13:0,39,1625	0/0:9,0:9:24.08:0,24,1012	1/1:4,12:24:51.18:3325,51,0	0/0:22,0:22:66.20:0,66,2615	0/0:17,0:17:51.16:0,51,2109	0/0:17,0:17:48.14:0,48,1903	0/0:21,0:21:57.14:0,57,2088	0/0:32,0:32:93.30:0,93,4066	0/0:19,0:19:51.17:0,51,2021	1/1:18,0:18:51.16:2461,51,0	1/1:5,4:12:24.49:1165,24,0	1/1:13,1:18:24.01:1074,24,0	0/0:12,0:12:30.10:0,30,1183	0/0:8,0:8:24.08:0,24,1026	0/0:26,0:26:75.26:0,75,3283	0/0:12,0:12:36.11:0,36,1301	0/0:29,0:29:78.25:0,78,3004	1/1:7,10:29:50.91:3320,51,0	0/0:11,0:11:33.11:0,33,1416
chr10	107483607	.	C	CTAAAG	7303.11	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-5.091;DP=504;FS=14.671;HRun=0;HaplotypeScore=89.2100;InbreedingCoeff=0.9986;MQ=96.03;MQ0=0;MQRankSum=-9.211;QD=69.55;ReadPosRankSum=-3.009;VQSLOD=4.5739;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.20:0,84,1702	0/0:9,0:9:24.08:0,24,511	0/0:20,0:20:44.28:0,44,945	0/0:32,0:30:78.08:0,78,1425	0/0:17,0:17:42.09:0,42,746	0/0:19,0:19:51.12:0,51,965	0/0:18,0:18:48.16:0,48,1023	1/1:4,16:23:57.16:1530,57,0	0/0:21,0:21:60.21:0,60,1258	0/0:12,0:12:33.11:0,33,703	0/0:12,0:12:33.11:0,33,700	1/1:3,11:15:36.12:1094,36,0	0/0:24,0:24:66.18:0,66,1287	0/0:11,0:11:30.09:0,30,600	0/0:13,0:13:36.12:0,36,767	0/0:16,0:16:45.13:0,45,899	0/0:32,0:32:79.09:0,79,1842	0/0:23,0:23:63.22:0,63,1340	1/1:2,6:10:27.08:760,27,0	1/1:1,12:15:39.13:1167,39,0	1/1:4,13:19:33.03:928,33,0	0/0:8,0:8:24.08:0,24,511	0/0:17,0:17:48.16:0,48,1021	0/0:15,0:15:45.09:0,45,875	0/0:22,0:22:66.14:0,66,1319	0/0:16,0:16:48.15:0,48,931	1/1:3,19:23:60.21:1824,60,0	0/0:13,0:13:39.13:0,39,808
chr10	107484089	.	GTGCA	G	7477.71	PASS	AB=0.933;AC=13;AF=0.232;AN=56;BaseQRankSum=16.971;DP=1089;FS=4.793;HRun=0;HaplotypeScore=184.6697;InbreedingCoeff=0.8493;MQ=60.67;MQ0=1;MQRankSum=0.670;QD=23.44;ReadPosRankSum=1.539;VQSLOD=4.6636;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,103,2490	0/0:22,0:22:51.08:0,51,1041	0/0:7,0:4:2.84:0,3,14	0/0:15,0:10:0:0,0,0	0/0:27,0:27:72.10:0,72,1301	0/0:32,0:32:66.21:0,66,1563	0/0:48,1:49:40.47:0,40,1669	1/1:9,24:33:68.89:844,69,0	0/0:52,2:54:73.64:0,74,2611	0/0:54,0:54:99:0,111,2420	0/0:23,0:23:48.12:0,48,994	1/1:13,43:56:90.17:1491,90,0	0/0:50,0:50:99:0,111,2412	0/0:54,1:55:46.57:0,47,2037	0/0:51,0:51:99:0,120,2736	0/0:43,0:43:90.25:0,90,1935	0/0:24,0:24:26.54:0,27,833	0/0:32,0:32:63.05:0,63,1380	1/1:5,19:23:53.83:665,54,0	1/1:2,15:17:26.72:447,27,0	1/1:55,96:150:99:3176,193,0	0/0:41,0:41:96.25:0,96,2177	0/0:18,0:18:36.12:0,36,809	0/0:51,0:51:99:0,114,2434	0/1:13,1:14:10.63:11,0,672	0/0:53,0:53:99:0,117,2580	1/1:3,21:24:51.17:844,51,0	0/0:25,0:25:57.20:0,57,1401
chr10	107484951	.	AAG	A	1976.88	PASS	AB=0.835;AC=39;AF=0.750;AN=52;BaseQRankSum=0.677;DP=577;FS=1.958;HRun=0;HaplotypeScore=119.2951;InbreedingCoeff=0.2879;MQ=65.61;MQ0=8;MQRankSum=-1.407;QD=4.16;ReadPosRankSum=-0.805;VQSLOD=2.5996;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,20:46:12.74:194,0,13	0/1:3,0:3:0.16:0,0,0	./.	./.	1/1:13,0:27:8.45:26,8,0	1/1:13,0:28:16.86:76,17,0	1/1:8,0:23:25.57:125,26,0	0/0:29,0:28:0:0,0,0	0/1:12,1:13:20.71:21,0,122	1/1:18,11:28:28.65:268,29,0	1/1:8,14:21:27.12:222,27,0	0/0:19,0:21:29.34:0,29,204	1/1:13,0:20:11.83:57,12,0	1/1:12,0:23:19.81:89,20,0	1/1:13,7:20:12.03:131,12,0	1/1:15,7:21:2.92:33,3,0	0/1:14,8:22:48.32:83,0,48	1/1:9,5:13:12.03:131,12,0	0/0:11,0:10:2.98:0,3,21	1/1:23,0:23:5.68:30,6,0	0/0:8,0:8:2.14:0,2,11	1/1:12,0:20:11.08:47,11,0	1/1:8,0:14:7.97:34,8,0	1/1:15,0:27:11.36:56,11,0	1/1:11,4:16:6.02:65,6,0	1/1:18,9:28:12.72:270,13,0	1/1:23,0:23:11.01:108,11,0	0/1:7,2:8:53.46:53,0,57
chr10	107484956	.	AGAGAGAGAGAGAG	A	1636.49	PASS	AB=0.871;AC=6;AF=0.107;AN=56;BaseQRankSum=6.407;DP=568;FS=23.466;HRun=0;HaplotypeScore=220.0467;InbreedingCoeff=-0.1062;MQ=63.32;MQ0=9;MQRankSum=-6.168;QD=17.98;ReadPosRankSum=4.676;VQSLOD=0.7996;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:90.77:0,91,2891	0/1:2,1:3:13.68:50,0,14	0/0:13,0:11:27.80:0,28,331	0/0:17,0:9:21.04:0,21,237	0/0:26,0:26:75.24:0,75,1191	0/0:28,0:28:47.20:0,47,696	0/0:22,0:22:26.05:0,26,354	0/1:27,0:26:99:218,0,221	0/0:14,0:14:32.87:0,33,1223	0/0:28,0:27:81.27:0,81,2711	0/0:26,0:25:56.93:0,57,1998	0/0:19,0:19:50.73:0,51,1470	0/0:19,0:19:50.74:0,51,635	0/0:22,0:22:38.10:0,38,591	0/0:20,0:20:45.15:0,45,1392	0/0:24,0:23:48.16:0,48,1325	0/0:22,0:22:45.15:0,45,1472	0/0:15,0:14:39.13:0,39,1191	0/1:11,0:10:37.26:37,0,100	0/1:15,6:21:99:460,0,154	0/1:8,0:8:50.01:121,0,50	0/0:17,0:17:42.09:0,42,606	0/0:16,0:14:24.07:0,24,409	0/0:26,0:25:39.04:0,39,513	0/0:14,0:14:33.11:0,33,689	0/0:30,0:30:90.30:0,90,3095	0/1:12,9:21:48.30:875,0,48	0/0:11,0:9:24.08:0,24,944
chr10	107485037	.	A	AAGACAGAC	1352.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.354;DP=656;FS=1.085;HRun=0;HaplotypeScore=163.8075;InbreedingCoeff=0.8978;MQ=63.17;MQ0=2;MQRankSum=-6.018;QD=54.11;ReadPosRankSum=0.678;VQSLOD=3.7413;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:81.27:0,81,1992	0/0:8,0:8:21.07:0,21,542	0/0:37,0:29:41.71:0,42,719	0/0:35,0:28:34.90:0,35,655	0/0:15,0:15:42.14:0,42,967	0/0:20,0:20:51.18:0,51,1296	0/0:31,0:31:75.10:0,75,1517	0/0:35,0:35:66.18:0,66,1192	0/0:15,0:15:36.11:0,36,879	0/0:31,0:31:75.25:0,75,1864	0/0:29,0:28:57.14:0,57,1313	1/1:5,19:25:36.12:1448,36,0	0/0:19,0:19:54.16:0,54,1197	0/0:27,0:27:65.52:0,66,1413	0/0:29,0:29:81.28:0,81,2030	0/0:23,0:23:63.19:0,63,1373	0/0:21,0:21:51.17:0,51,1207	0/0:15,0:15:45.07:0,45,995	0/0:19,0:19:30.04:0,30,575	0/0:30,0:30:57.17:0,57,1343	0/0:30,0:30:63.20:0,63,1441	0/0:20,0:20:48.14:0,48,1086	0/0:10,0:9:21.07:0,21,542	0/0:27,0:27:75.10:0,75,1478	0/0:20,0:20:54.17:0,54,1317	0/0:26,0:26:63.18:0,63,1482	0/0:21,0:21:48.13:0,48,1134	0/0:4,0:4:6.02:0,6,155
chr10	107485967	.	T	TG	5795.90	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-7.509;DP=642;FS=0.000;HRun=3;HaplotypeScore=61.2232;InbreedingCoeff=0.9996;MQ=89.10;MQ0=0;MQRankSum=-1.338;QD=36.68;ReadPosRankSum=0.069;VQSLOD=5.0903;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,1619	1/1:1,8:9:24.08:336,24,0	0/0:27,0:27:72.21:0,72,852	0/0:23,0:23:57.16:0,57,668	0/0:19,0:19:54.15:0,54,636	0/0:15,0:15:45.14:0,45,540	0/0:21,0:21:63.19:0,63,756	1/1:1,33:34:96.32:1331,96,0	0/0:17,0:17:51.16:0,51,612	0/0:35,0:35:99:0,105,1247	0/0:15,0:15:45.14:0,45,540	1/1:2,22:24:63.21:882,63,0	0/0:27,0:27:72.21:0,72,852	0/0:18,0:18:54.17:0,54,646	0/0:13,0:13:36.11:0,36,432	0/0:18,0:18:48.14:0,48,566	0/0:37,0:37:99:0,102,1209	0/0:20,0:19:57.13:0,57,668	1/1:4,23:27:69.22:945,69,0	1/1:1,22:23:57.19:789,57,0	1/1:1,26:27:66.22:924,66,0	0/0:31,0:31:84.26:0,84,1008	0/0:27,0:27:81.25:0,81,971	0/0:26,0:26:78.22:0,78,923	0/0:18,0:18:45.14:0,45,540	0/0:19,0:19:54.16:0,54,647	1/1:0,14:14:42.14:588,42,0	0/0:12,0:12:36.11:0,36,432
chr10	107487304	.	G	GT	147.94	PASS	AB=0.964;AC=3;AF=0.054;AN=56;BaseQRankSum=-2.007;DP=617;FS=4.646;HRun=8;HaplotypeScore=60.7895;InbreedingCoeff=0.7300;MQ=73.77;MQ0=4;MQRankSum=0.468;QD=4.35;ReadPosRankSum=-2.120;VQSLOD=-0.4537;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,969	1/1:0,7:7:21.06:240,21,0	0/0:26,0:16:17.68:0,18,139	0/1:26,0:19:1.31:1,0,179	0/0:29,1:30:43.42:0,43,652	0/0:21,0:21:63.03:0,63,576	0/0:11,0:11:27.01:0,27,247	0/0:32,0:32:83.96:0,84,751	0/0:25,0:25:54.02:0,54,494	0/0:30,0:30:78.03:0,78,710	0/0:22,0:22:63.03:0,63,576	0/0:16,0:16:33:0,33,297	0/0:18,0:18:45.01:0,45,412	0/0:29,0:29:84.04:0,84,768	0/0:19,0:19:51.03:0,51,467	0/0:18,0:18:45.02:0,45,412	0/0:32,0:32:87.01:0,87,785	0/0:18,0:18:51.03:0,51,467	0/0:20,0:20:51.03:0,51,466	0/0:12,0:12:33.01:0,33,302	0/0:17,0:17:44.99:0,45,407	0/0:16,0:16:42.01:0,42,384	0/0:18,0:18:10.36:0,10,350	0/0:17,0:17:45.02:0,45,412	0/0:21,0:21:51.01:0,51,463	0/0:27,0:27:69.03:0,69,632	0/0:33,0:33:93.05:0,93,851	0/0:16,0:16:42.01:0,42,384
chr10	107487333	.	C	CT	208.95	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.005;DP=616;FS=0.000;HRun=6;HaplotypeScore=58.0893;InbreedingCoeff=0.9721;MQ=72.76;MQ0=5;MQRankSum=-2.435;QD=17.41;ReadPosRankSum=-0.433;VQSLOD=3.0169;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,1110	0/0:5,0:5:15.02:0,15,148	0/0:35,0:22:42.96:0,43,422	0/0:26,1:17:27:0,27,257	0/0:26,0:26:66.11:0,66,659	0/0:20,0:20:54.12:0,54,550	0/0:17,0:17:48.11:0,48,490	0/0:34,0:34:81.14:0,81,807	0/0:17,0:17:42.04:0,42,407	0/0:22,0:22:60.12:0,60,607	0/0:21,0:21:60.06:0,60,592	1/1:0,12:12:24.08:302,24,0	0/0:17,0:17:45.07:0,45,444	0/0:25,0:25:72.16:0,72,734	0/0:18,0:18:54.11:0,54,544	0/0:19,0:19:54.09:0,54,536	0/0:37,0:37:99:0,108,1080	0/0:27,0:27:65.73:0,66,652	0/0:25,0:25:53.98:0,54,518	0/0:11,0:11:27.05:0,27,275	0/0:19,0:18:48.09:0,48,482	0/0:23,0:23:66.15:0,66,672	0/0:13,0:13:31.82:0,32,326	0/0:23,0:23:63:0,63,600	0/0:18,0:18:36.04:0,36,355	0/0:23,0:23:63.11:0,63,627	0/0:30,0:30:75.13:0,75,746	0/0:10,0:10:18.03:0,18,177
chr10	107487466	.	AG	A	2891.92	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=12.453;DP=539;FS=3.136;HRun=2;HaplotypeScore=68.8699;InbreedingCoeff=0.8904;MQ=86.92;MQ0=0;MQRankSum=-0.731;QD=27.03;ReadPosRankSum=0.433;VQSLOD=3.2793;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,159,2196	0/1:5,0:5:15.71:16,0,16	0/0:26,0:25:30.67:0,31,387	0/0:21,0:18:45.64:0,46,471	0/0:23,0:23:65.73:0,66,831	0/0:13,0:13:39.12:0,39,561	0/0:22,0:22:66.19:0,66,912	1/1:0,31:31:90.16:1052,90,0	0/0:14,0:14:39.11:0,39,542	0/0:19,0:19:51.14:0,51,694	0/0:9,0:9:24.07:0,24,336	0/0:12,0:12:26.05:0,26,421	0/0:13,0:13:35.44:0,35,450	0/0:27,0:27:78.15:0,78,1090	0/0:18,0:18:48.14:0,48,692	0/0:10,0:10:30.08:0,30,410	0/0:22,0:22:57.55:0,58,850	0/0:26,0:26:65.17:0,65,876	1/1:2,10:12:30.65:410,31,0	1/1:1,10:11:30.04:367,30,0	1/1:1,24:25:45.12:565,45,0	0/0:14,0:14:36.08:0,36,477	0/0:16,0:16:48.13:0,48,663	0/0:26,0:26:78.21:0,78,1081	0/0:20,0:20:56.52:0,57,746	0/0:21,0:21:60.18:0,60,857	1/1:2,21:23:49.88:662,50,0	0/0:7,0:7:21.05:0,21,292
chr10	107487468	.	GA	G	645.56	PASS	AB=0.928;AC=11;AF=0.196;AN=56;BaseQRankSum=12.692;DP=550;FS=4.820;HRun=10;HaplotypeScore=75.0491;InbreedingCoeff=0.6103;MQ=84.41;MQ0=0;MQRankSum=0.276;QD=4.19;ReadPosRankSum=0.438;VQSLOD=0.6754;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:57:99:0,141,1512	0/0:5,0:5:12.03:0,12,132	0/0:26,0:24:10.07:0,10,217	0/0:20,0:17:27.35:0,27,270	0/0:21,0:22:50.92:0,51,526	0/0:14,0:14:39.10:0,39,424	0/0:21,0:22:56.99:0,57,612	1/1:32,0:32:59.79:259,60,0	0/0:13,0:14:38.93:0,39,405	0/0:19,0:19:45.12:0,45,493	0/0:11,0:11:5.85:0,6,237	0/0:11,1:12:7.04:0,7,299	0/0:11,1:13:3.86:0,4,254	0/0:27,0:27:75.15:0,75,807	0/0:17,0:17:51.12:0,51,553	0/0:11,0:11:27.06:0,27,291	0/1:19,3:22:11.98:12,0,564	0/1:24,3:28:3.34:3,0,592	0/1:12,0:12:2.88:86,0,3	1/1:11,0:11:2.01:90,2,0	1/1:27,0:27:20.14:161,20,0	0/0:13,0:13:29.29:0,29,306	0/0:16,0:16:42.11:0,42,464	0/0:29,0:29:81.17:0,81,864	0/0:19,1:20:22.08:0,22,472	0/0:20,0:20:57.15:0,57,630	1/1:22,0:22:17.46:192,17,0	0/0:7,0:7:18.05:0,18,199
chr10	107487702	.	T	TTTG	1781.76	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-8.127;DP=543;FS=1.879;HRun=0;HaplotypeScore=89.1767;InbreedingCoeff=0.8839;MQ=55.81;MQ0=15;MQRankSum=-3.383;QD=20.25;ReadPosRankSum=-1.926;VQSLOD=3.3355;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:38:86.95:0,87,950	0/0:7,0:6:17.99:0,18,156	0/0:24,0:9:10.24:0,10,87	0/0:23,0:8:3.47:0,3,28	0/0:22,0:21:51.07:0,51,609	0/0:20,0:20:50.81:0,51,542	0/0:15,0:14:29.16:0,29,239	1/1:6,12:21:44.64:591,45,0	0/0:11,0:11:30.04:0,30,322	0/0:28,0:27:65.50:0,66,648	0/0:10,0:10:18.05:0,18,236	0/0:13,0:12:3:0,3,26	0/0:9,0:9:20.87:0,21,196	0/0:14,0:14:41.86:0,42,428	0/0:23,0:23:53.86:0,54,562	0/0:17,0:15:40.55:0,41,433	0/0:35,0:34:89.37:0,89,973	0/0:38,0:39:81.18:0,81,863	1/1:8,18:27:56.59:689,57,0	1/1:3,6:9:20.91:295,21,0	1/1:3,6:11:8.82:133,9,0	0/0:11,0:10:17.69:0,18,187	0/0:13,0:13:29.72:0,30,320	0/0:42,0:42:99:0,110,1284	0/0:7,0:6:15.02:0,15,160	0/0:27,0:27:63.26:0,63,721	1/1:8,10:18:15.01:242,15,0	0/0:5,0:5:15.01:0,15,158
chr10	107488481	.	T	TCC	2338.74	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-5.978;DP=534;FS=2.321;HRun=8;HaplotypeScore=71.7279;InbreedingCoeff=0.9636;MQ=87.20;MQ0=0;MQRankSum=-1.434;QD=22.93;ReadPosRankSum=-1.159;VQSLOD=2.6002;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:72.04:0,72,754	0/1:3,0:3:0:0,0,0	0/0:26,0:27:34.60:0,35,507	0/0:18,0:18:31.56:0,32,280	0/0:19,0:19:51.11:0,51,559	0/0:16,0:16:48.10:0,48,516	0/0:21,0:21:54.08:0,54,580	1/1:4,7:12:21.03:285,21,0	0/0:19,0:20:53.85:0,54,568	0/0:26,0:26:75.20:0,75,833	0/0:17,0:17:45.11:0,45,491	1/1:1,14:16:26.58:390,27,0	0/0:23,0:23:54.06:0,54,586	0/0:21,0:21:34.11:0,34,528	0/0:19,0:19:54.11:0,54,584	0/0:21,0:21:48.10:0,48,527	0/0:26,0:26:72.17:0,72,790	0/0:20,0:20:54.14:0,54,602	1/1:4,13:17:36.03:472,36,0	1/1:4,6:10:17.97:225,18,0	1/1:5,17:23:38.22:581,38,0	0/0:19,0:19:42.08:0,42,459	0/0:22,0:22:57.08:0,57,603	0/0:17,0:17:48.06:0,48,505	0/0:19,0:20:45.03:0,45,543	0/0:14,0:14:30.06:0,30,327	1/1:3,18:21:35.81:571,36,0	0/0:15,0:15:39.04:0,39,405
chr10	107489416	.	GGACC	G	6269.51	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.553;DP=650;FS=1.691;HRun=0;HaplotypeScore=106.6189;InbreedingCoeff=0.9978;MQ=84.60;MQ0=0;MQRankSum=-6.752;QD=45.43;ReadPosRankSum=0.479;VQSLOD=5.1244;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,2989	1/1:1,7:8:21.07:392,21,0	0/0:23,0:23:57.20:0,57,1407	0/0:25,0:25:66.21:0,66,1527	0/0:24,0:24:66.23:0,66,1699	0/0:24,0:24:66.23:0,66,1737	0/0:27,0:27:78.27:0,78,2036	1/1:2,26:28:75.26:1391,75,0	0/0:22,0:22:66.23:0,66,1759	0/0:25,0:25:69.24:0,69,1836	0/0:19,0:19:57.20:0,57,1450	1/1:1,17:18:45.15:822,45,0	0/0:19,0:19:57.20:0,57,1485	0/0:21,0:21:63.22:0,63,1635	0/0:20,0:20:60.21:0,60,1559	0/0:23,0:23:69.24:0,69,1793	0/0:45,0:45:99:0,108,2725	0/0:34,0:34:96.33:0,96,2523	1/1:0,14:14:42.14:774,42,0	1/1:1,18:19:42.14:746,42,0	1/1:1,25:26:54.18:989,54,0	0/0:23,0:23:66.22:0,66,1700	0/0:6,0:6:18.06:0,18,454	0/0:28,0:27:84.29:0,84,2230	0/0:24,0:24:66.19:0,66,1690	0/0:24,0:24:66.23:0,66,1750	1/1:3,22:25:63.22:1157,63,0	0/0:15,0:15:42.14:0,42,1116
chr10	107490174	.	AAAC	A	57.71	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=4.719;DP=639;FS=3.711;HRun=0;HaplotypeScore=107.9794;InbreedingCoeff=0.4824;MQ=53.93;MQ0=16;MQRankSum=1.498;QD=2.22;ReadPosRankSum=-0.953;VQSLOD=2.0034;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:89.13:0,89,1562	1/1:7,2:8:10.85:123,11,0	0/0:16,0:3:9.03:0,9,145	0/0:12,0:3:6.02:0,6,77	0/0:10,0:10:25.33:0,25,495	0/0:14,0:14:39.13:0,39,747	0/0:44,0:44:99:0,124,2365	0/0:36,0:34:44.45:0,44,394	0/0:24,0:24:66.06:0,66,1389	0/0:25,0:23:69.23:0,69,1404	0/0:13,0:13:36.12:0,36,808	0/0:15,0:14:32.44:0,32,225	0/0:17,0:16:48.16:0,48,1005	0/0:21,0:21:57.19:0,57,1144	0/0:16,0:16:45.07:0,45,823	0/0:12,0:12:33.04:0,33,661	0/0:51,0:51:99:0,139,2927	0/0:25,0:24:53.24:0,53,1308	0/0:17,0:14:5.14:0,5,137	0/1:17,0:17:33.67:34,0,163	0/0:82,1:82:32.79:0,33,444	0/0:10,0:10:27.56:0,28,575	0/0:12,0:12:27.56:0,28,531	0/0:34,0:33:92.30:0,92,1936	0/0:17,0:17:51.11:0,51,984	0/0:27,0:26:72.16:0,72,1345	0/0:16,1:17:9.44:0,9,144	0/0:8,0:8:23.29:0,23,462
chr10	107490175	.	AAC	A	2143.74	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=6.675;DP=643;FS=15.305;HRun=0;HaplotypeScore=90.2744;InbreedingCoeff=0.8059;MQ=53.84;MQ0=17;MQRankSum=-0.356;QD=10.06;ReadPosRankSum=-1.632;VQSLOD=2.0821;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,3:35:32.02:0,32,842	1/1:10,0:9:24.01:262,24,0	0/0:16,1:3:8.92:0,9,104	0/0:15,0:3:5.91:0,6,39	0/1:10,0:10:1.94:2,0,311	0/0:14,0:14:36.01:0,36,488	0/0:43,0:43:93.26:0,93,1416	1/1:12,24:34:66.10:751,66,0	0/0:25,0:25:62.38:0,62,959	0/0:25,0:23:57.01:0,57,831	0/0:15,0:15:42.03:0,42,610	1/1:15,0:14:7.73:213,8,0	0/0:17,0:16:45.15:0,45,691	0/0:20,0:20:53.64:0,54,734	0/0:16,0:16:36.12:0,36,537	0/0:12,0:12:27.09:0,27,395	0/0:51,0:51:99:0,124,1884	0/0:26,0:25:10.06:0,10,717	1/1:8,9:14:28.30:307,28,0	1/1:5,12:17:29.55:245,30,0	1/1:18,65:82:38.96:456,39,0	0/0:10,0:10:24.08:0,24,372	0/0:12,0:12:26.56:0,27,366	0/0:33,1:33:49.95:0,50,1232	0/0:17,0:17:42.03:0,42,602	0/0:25,0:24:55.91:0,56,780	1/1:6,10:16:8.96:90,9,0	0/1:9,0:9:9.51:10,0,313
chr10	107490315	.	C	CT	591.08	PASS	AB=0.936;AC=15;AF=0.268;AN=56;BaseQRankSum=5.223;DP=423;FS=1.509;HRun=13;HaplotypeScore=105.3582;InbreedingCoeff=0.2315;MQ=56.34;MQ0=8;MQRankSum=-1.382;QD=2.99;ReadPosRankSum=-3.369;VQSLOD=0.0915;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,1:23:5.92:6,0,153	0/0:1,0:6:9.94:0,10,29	0/0:10,0:6:4.67:0,5,21	0/0:18,0:5:2.27:0,2,8	0/1:16,3:19:24.84:25,0,137	0/0:9,0:10:16.69:0,17,107	0/0:8,0:8:6.89:0,7,31	1/1:26,8:34:7.13:183,7,0	0/0:15,1:16:26.85:0,27,142	0/0:15,0:17:18.29:0,18,114	0/1:21,1:23:34.17:34,0,96	0/0:7,0:8:5.86:0,6,18	0/0:15,0:15:3.08:0,3,66	0/1:9,0:9:7.80:8,0,22	0/0:13,0:13:14.92:0,15,117	0/1:10,1:11:26.19:26,0,62	0/1:19,0:19:2.11:2,0,93	0/0:14,0:14:3.38:0,3,84	0/1:14,3:15:3.45:85,0,3	1/1:14,6:19:9.01:205,9,0	1/1:2,3:5:3:28,3,0	0/0:5,0:5:11.42:0,11,82	0/0:15,1:18:6.12:0,6,182	0/0:6,0:7:7.86:0,8,41	0/0:21,0:21:6.56:0,7,178	0/0:19,0:20:17.81:0,18,178	1/1:15,0:14:22.28:144,22,0	0/0:17,0:15:12.89:0,13,225
chr10	107490328	.	TG	T	1721.76	PASS	AB=0.977;AC=25;AF=0.446;AN=56;BaseQRankSum=8.256;DP=472;FS=141.945;HRun=1;HaplotypeScore=60.0317;InbreedingCoeff=-0.6017;MQ=47.24;MQ0=24;MQRankSum=-8.628;QD=4.23;ReadPosRankSum=-2.198;VQSLOD=-0.1841;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,1:22:79.26:79,0,302	0/1:9,1:10:31.35:34,0,31	0/1:10,1:4:1.15:26,0,1	0/0:20,0:4:4.37:0,4,33	0/1:21,0:20:44.70:45,0,264	0/1:13,0:12:57.25:57,0,108	0/1:8,0:6:7.52:34,0,8	0/1:30,1:29:84.01:84,0,166	0/1:14,0:14:30.25:30,0,113	0/1:19,0:19:33.29:33,0,252	0/1:22,0:22:99:149,0,121	0/1:11,0:10:5.56:131,0,6	0/1:13,0:13:57.47:57,0,93	0/1:12,0:11:13.32:55,0,13	0/1:14,0:14:45.62:46,0,185	0/1:14,0:14:31.25:31,0,117	0/1:25,0:23:99:137,0,130	0/1:20,0:20:95.59:96,0,123	0/1:17,0:11:58.16:115,0,58	0/1:21,0:20:99:113,0,100	0/1:5,0:4:7.01:8,0,7	0/0:10,0:10:8.94:0,9,191	0/0:17,0:16:5.35:0,5,307	0/1:3,2:5:6.79:7,0,51	0/1:29,0:29:99:155,0,231	0/1:26,0:23:81.80:82,0,227	1/1:20,1:19:18.66:272,19,0	0/0:18,0:15:21.82:0,22,433
chr10	107490741	.	CG	C	4677.85	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.472;DP=661;FS=4.491;HRun=3;HaplotypeScore=69.8819;InbreedingCoeff=0.9961;MQ=79.08;MQ0=0;MQRankSum=-3.022;QD=32.94;ReadPosRankSum=-1.576;VQSLOD=4.6503;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,1845	0/0:5,0:5:15.05:0,15,216	0/0:23,0:23:63.19:0,63,888	0/0:20,0:20:51.10:0,51,664	0/0:14,0:14:36.11:0,36,498	0/0:17,0:17:45.15:0,45,648	0/0:34,0:34:96.32:0,96,1382	1/1:2,31:33:93.29:1149,93,0	0/0:22,0:22:63.19:0,63,871	0/0:21,0:21:60.20:0,60,863	0/0:13,0:13:36.12:0,36,518	0/0:12,0:12:33:0,33,475	0/0:14,0:14:39.13:0,39,561	0/0:22,0:22:66.21:0,66,932	0/0:33,0:33:93.31:0,93,1337	0/0:24,0:24:72.24:0,72,1034	0/0:40,0:39:99:0,120,1720	0/0:31,0:31:93.27:0,93,1315	1/1:3,23:26:69.22:854,69,0	1/1:1,30:30:84.22:1039,84,0	1/1:0,30:30:72.23:892,72,0	0/0:21,0:21:57.19:0,57,818	0/0:20,0:20:54.15:0,54,738	0/0:37,0:37:99:0,105,1507	0/0:15,0:15:42.10:0,42,581	0/0:23,0:23:69.21:0,69,959	1/1:1,21:22:60.19:743,60,0	0/0:11,0:11:30.07:0,30,411
chr10	107490857	.	C	CT	1217.32	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=2.752;DP=495;FS=0.608;HRun=8;HaplotypeScore=70.4780;InbreedingCoeff=0.6784;MQ=82.67;MQ0=3;MQRankSum=-2.957;QD=6.76;ReadPosRankSum=-4.152;VQSLOD=0.1464;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:38.85:0,39,319	0/0:5,0:5:11.97:0,12,99	0/1:41,0:20:6.80:7,0,87	0/0:37,0:20:3.79:0,4,61	0/0:9,0:9:14.39:0,14,99	0/0:19,0:19:31.15:0,31,260	0/0:20,0:20:28.51:0,29,264	1/1:22,1:23:38.81:336,39,0	0/0:18,0:18:35.68:0,36,248	0/0:12,0:12:11.96:0,12,106	0/1:13,0:13:0.59:1,0,140	1/1:14,1:15:12.01:110,12,0	0/0:11,0:11:20.96:0,21,184	0/0:11,0:11:16.80:0,17,137	0/0:20,0:19:29.60:0,30,256	0/1:15,0:15:10.65:11,0,145	0/0:27,0:27:22.42:0,22,363	0/0:29,1:30:10.26:0,10,323	1/1:21,1:21:30.51:364,31,0	1/1:12,1:13:11.45:167,11,0	1/1:17,2:19:17.76:156,18,0	0/0:12,0:12:14.96:0,15,123	0/0:7,0:7:5.97:0,6,50	0/0:24,0:24:37.96:0,38,307	0/0:9,0:9:20.95:0,21,177	0/0:18,0:18:26.23:0,26,191	1/1:18,0:16:31.47:247,31,0	0/0:1,0:1:2.97:0,3,20
chr10	107490865	.	T	TTGG	2156.42	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=1.173;DP=517;FS=6.260;HRun=0;HaplotypeScore=96.4026;InbreedingCoeff=0.9481;MQ=76.25;MQ0=4;MQRankSum=-1.680;QD=18.92;ReadPosRankSum=-1.824;VQSLOD=2.5298;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:19:44.92:0,45,530	0/0:7,0:7:17.85:0,18,192	0/0:54,0:21:24.54:0,25,228	0/0:46,0:19:24:0,24,206	0/0:11,0:12:20.43:0,20,198	0/0:18,0:18:40.17:0,40,497	0/0:18,0:18:41.81:0,42,541	1/1:16,1:19:46.74:411,47,0	0/0:4,0:18:36.02:0,36,355	0/0:9,0:9:14.64:0,15,190	0/0:16,0:16:31.13:0,31,325	1/1:4,1:16:14.94:254,15,0	0/0:11,0:11:20.77:0,21,309	0/0:10,0:10:26.95:0,27,317	0/0:25,0:24:62.12:0,62,706	0/0:11,0:14:19.03:0,19,270	0/0:24,0:24:43.54:0,44,781	0/0:29,0:29:60.80:0,61,794	1/1:21,3:23:37.06:611,37,0	1/1:12,1:13:33.63:341,34,0	1/1:6,12:26:20.24:321,20,0	0/0:11,0:11:26.41:0,26,287	0/0:8,0:8:14.58:0,15,154	0/0:23,0:23:63.01:0,63,668	0/0:11,0:11:29.89:0,30,368	0/0:18,0:18:35.28:0,35,332	1/1:11,2:14:33.03:404,33,0	0/0:0,0:2:3.01:0,3,33
chr10	107490875	.	G	GGA	1736.77	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-0.197;DP=475;FS=0.507;HRun=0;HaplotypeScore=78.6331;InbreedingCoeff=0.8717;MQ=81.75;MQ0=4;MQRankSum=-1.406;QD=17.37;ReadPosRankSum=0.141;VQSLOD=3.6108;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:53.84:0,54,534	0/1:6,0:6:13.17:13,0,18	0/0:56,0:25:54.21:0,54,438	0/0:49,0:23:41.09:0,41,344	0/0:8,0:8:20.69:0,21,195	0/0:16,0:16:39.09:0,39,474	0/0:19,0:19:56.89:0,57,634	1/1:8,7:15:31.76:309,32,0	0/0:16,0:16:29.86:0,30,229	0/0:8,0:8:15.04:0,15,190	0/0:10,0:10:27.06:0,27,334	1/1:11,0:12:15.01:128,15,0	0/0:9,0:9:23.95:0,24,286	0/0:12,0:12:35.67:0,36,412	0/0:23,0:22:66.09:0,66,828	0/0:15,0:15:39.01:0,39,410	0/0:23,0:23:69.14:0,69,860	0/0:25,0:25:72:0,72,854	1/1:9,12:22:46.99:571,47,0	1/1:3,8:12:26.83:290,27,0	1/1:15,2:19:35.81:346,36,0	0/0:10,0:10:26.73:0,27,314	0/0:8,0:8:17.86:0,18,197	0/0:24,0:24:62.60:0,63,727	0/0:9,0:9:27.04:0,27,318	0/0:13,0:13:35.99:0,36,384	1/1:5,6:11:12.86:267,13,0	0/0:3,0:3:5.98:0,6,46
chr10	107495008	.	CAG	C	6640.55	PASS	AB=0.984;AC=13;AF=0.232;AN=56;BaseQRankSum=12.304;DP=1228;FS=3.753;HRun=0;HaplotypeScore=181.0906;InbreedingCoeff=0.9237;MQ=55.02;MQ0=24;MQRankSum=0.454;QD=16.48;ReadPosRankSum=-0.586;VQSLOD=4.8544;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:67,0:64:99:0,162,2622	0/0:7,0:7:18.03:0,18,262	0/0:56,0:24:52.32:0,52,697	0/1:62,0:28:4.32:4,0,589	0/0:31,0:30:63.33:0,63,1386	0/0:29,0:29:63.11:0,63,964	0/0:47,0:47:99:0,110,1827	1/1:12,52:55:99:1528,130,0	0/0:45,0:45:99:0,128,2069	0/0:48,0:48:36.60:0,37,1768	0/0:28,0:28:81.20:0,81,1317	1/1:16,23:38:81.11:1057,81,0	0/0:36,0:36:81.58:0,82,1777	0/0:36,0:36:96.18:0,96,1433	0/0:51,0:51:99:0,138,2227	0/0:41,0:41:99:0,108,1690	0/0:51,0:50:99:0,129,2097	0/0:42,0:42:81.20:0,81,1494	1/1:24,5:24:59.15:582,59,0	1/1:17,23:38:87.22:1143,87,0	1/1:36,115:146:68.41:1749,68,0	0/0:39,0:39:99:0,105,1781	0/0:21,0:21:23.88:0,24,805	0/0:52,0:52:99:0,136,2299	0/0:24,0:24:59.64:0,60,940	0/0:64,0:62:99:0,145,2801	1/1:4,13:17:45.04:578,45,0	0/0:10,0:10:30.06:0,30,486
chr10	107495012	.	GAC	G	2185.04	PASS	AB=0.993;AC=11;AF=0.196;AN=56;BaseQRankSum=15.908;DP=1204;FS=3.274;HRun=0;HaplotypeScore=195.3295;InbreedingCoeff=0.6900;MQ=56.01;MQ0=22;MQRankSum=4.286;QD=5.81;ReadPosRankSum=2.701;VQSLOD=2.8077;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:66,1:65:99:0,150,2419	0/0:7,0:7:15.05:0,15,247	0/0:53,0:27:50.36:0,50,602	0/0:69,0:32:54.33:0,54,863	0/0:30,0:29:75.20:0,75,1222	0/0:24,0:24:51.16:0,51,817	0/1:47,1:48:2.62:3,0,1563	0/1:61,0:54:63.88:408,0,64	0/0:45,0:46:99:0,123,1964	0/0:45,0:45:99:0,117,1833	0/0:28,0:28:78.25:0,78,1251	1/1:37,0:36:64.83:403,65,0	0/0:35,2:37:32.03:0,32,1575	0/0:34,0:34:78.24:0,78,1233	0/0:50,0:50:99:0,129,2079	0/0:40,0:40:93.28:0,93,1469	0/0:49,0:48:99:0,122,1976	0/0:38,0:39:70.37:0,70,1281	0/1:29,0:25:43.60:127,0,44	1/1:41,0:40:72.84:461,73,0	1/1:142,0:136:63.08:711,63,0	0/0:37,0:37:99:0,108,1688	0/0:18,0:18:31.52:0,32,768	0/0:53,1:56:99:0,139,2177	0/0:25,0:25:51.05:0,51,846	0/0:64,0:62:99:0,120,2458	1/1:18,0:18:35.56:243,36,0	0/0:10,0:10:30.10:0,30,488
chr10	107495088	.	G	GAGACACAC	7611.62	PASS	AB=0.978;AC=15;AF=0.268;AN=56;BaseQRankSum=0.263;DP=1155;FS=0.000;HRun=0;HaplotypeScore=314.7129;InbreedingCoeff=0.9078;MQ=56.44;MQ0=5;MQRankSum=-11.138;QD=26.34;ReadPosRankSum=-2.025;VQSLOD=3.5235;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:83,0:82:99:0,205,5018	1/1:10,0:9:18.17:328,18,0	0/0:34,0:30:54.15:0,54,1136	0/1:43,0:33:4.55:5,0,1188	0/0:35,0:35:93.24:0,93,2184	0/0:29,0:29:70.03:0,70,1506	0/0:37,0:37:96.23:0,96,2108	1/1:46,0:39:69.66:1173,70,0	0/0:56,0:56:99:0,144,3170	0/0:60,0:60:99:0,144,3292	0/0:24,0:24:51.16:0,51,1268	1/1:5,42:51:48.89:2241,49,0	0/0:35,0:35:83.84:0,84,1727	0/0:35,0:35:98.98:0,99,2251	0/0:48,0:48:99:0,123,2742	0/0:46,0:46:99:0,120,2809	0/0:45,0:45:99:0,127,2852	0/0:40,0:40:87.19:0,87,2125	1/1:8,17:26:60.14:1707,60,0	1/1:6,29:37:27.12:1186,27,0	1/1:46,3:48:5.57:204,6,0	0/0:51,0:51:99:0,144,3434	0/0:27,0:27:46.31:0,46,1373	0/0:70,0:70:99:0,187,4524	0/0:32,0:32:87.24:0,87,2002	0/0:57,0:57:99:0,156,3677	1/1:2,17:21:17.97:768,18,0	0/0:21,0:21:63.20:0,63,1529
chr10	107495188	.	AAC	A	152.40	PASS	AB=0.619;AC=1;AF=0.018;AN=56;BaseQRankSum=6.072;DP=1142;FS=0.994;HRun=0;HaplotypeScore=180.3033;InbreedingCoeff=-0.0182;MQ=56.94;MQ0=14;MQRankSum=-1.498;QD=11.72;ReadPosRankSum=-1.551;VQSLOD=3.1206;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:65,1:66:99:0,123,2621	0/1:5,8:13:74.86:227,0,75	0/0:43,0:21:58.80:0,59,876	0/0:47,1:23:37.96:0,38,528	0/0:35,0:35:96.33:0,96,1621	0/0:30,0:30:68.21:0,68,1114	0/0:41,0:41:99:0,102,1703	0/0:75,0:72:99:0,160,2455	0/0:34,0:34:90.29:0,90,1470	0/0:57,0:57:99:0,120,2412	0/0:28,0:28:75.14:0,75,1176	0/0:43,0:43:96.33:0,96,1592	0/0:36,0:36:93.28:0,93,1518	0/0:25,1:26:30.20:0,30,1057	0/0:38,0:38:99:0,105,1724	0/0:42,0:42:99:0,117,1916	0/0:40,0:39:96.30:0,96,1603	0/0:48,0:48:91.38:0,91,1814	0/0:33,0:30:60.20:0,60,1003	0/0:32,0:32:75.26:0,75,1255	0/0:100,0:99:99:0,182,3127	0/0:47,0:47:99:0,117,1882	0/0:29,0:29:78.18:0,78,1236	0/0:56,0:56:99:0,135,2148	0/0:21,0:21:51.17:0,51,855	0/0:50,0:50:99:0,132,2195	0/0:17,0:16:51.15:0,51,839	0/0:14,0:14:42.14:0,42,713
chr10	107495271	.	ACAGACAGC	A	339.43	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.289;DP=1071;FS=1.252;HRun=0;HaplotypeScore=281.9909;InbreedingCoeff=0.9949;MQ=62.31;MQ0=1;MQRankSum=-1.745;QD=33.94;ReadPosRankSum=-2.125;VQSLOD=2.6799;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,187,7713	1/1:6,4:10:21.04:432,21,0	0/0:38,0:32:84.15:0,84,2201	0/0:47,0:40:95.29:0,95,2732	0/0:33,0:33:93.28:0,93,3358	0/0:32,0:32:87.28:0,87,3260	0/0:32,0:32:96.32:0,96,3779	0/0:44,0:44:99:0,123,4451	0/0:40,0:40:99:0,111,4547	0/0:35,0:35:90.21:0,90,3401	0/0:21,0:21:54.18:0,54,2059	0/0:45,0:45:99:0,129,4582	0/0:30,0:30:90.25:0,90,3419	0/0:41,0:41:99:0,123,4628	0/0:52,0:52:99:0,148,6143	0/0:49,0:49:99:0,141,5704	0/0:39,0:39:99:0,111,4586	0/0:41,0:41:97.59:0,98,4252	0/0:30,0:29:84.26:0,84,2950	0/0:35,0:35:99:0,102,4174	0/0:91,0:91:99:0,250,9260	0/0:41,0:41:99:0,123,4232	0/0:28,0:28:81.24:0,81,2922	0/0:44,0:44:99:0,122,4913	0/0:35,0:35:99:0,105,4132	0/0:43,0:43:99:0,129,4901	0/0:23,0:23:69.17:0,69,2811	0/0:9,0:9:27.09:0,27,1048
chr10	107495273	.	AGACAGC	A	123.06	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.530;DP=1080;FS=10.653;HRun=0;HaplotypeScore=240.4273;InbreedingCoeff=0.9903;MQ=63.78;MQ0=1;MQRankSum=-2.705;QD=13.67;ReadPosRankSum=-2.205;VQSLOD=1.2443;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:67,0:67:99:0,199,7026	1/1:9,0:9:17.71:213,18,0	0/0:36,0:33:90.13:0,90,2258	0/0:45,0:41:60.71:0,61,2551	0/0:31,0:31:93.28:0,93,3116	0/0:30,1:31:87.28:0,87,2977	0/0:33,0:33:99:0,99,3440	0/0:47,0:47:99:0,141,4592	0/0:39,0:39:99:0,111,3955	0/0:35,0:35:96.01:0,96,3221	0/0:20,0:20:57.20:0,57,1968	0/0:47,0:47:99:0,135,4307	0/0:31,0:31:93.26:0,93,3088	0/0:41,0:41:99:0,123,4092	0/0:51,0:51:99:0,154,5536	0/0:51,0:51:99:0,147,5118	0/0:41,0:41:99:0,120,4143	0/0:40,1:41:46.07:0,46,3711	0/0:30,0:29:87.27:0,87,2800	0/0:35,0:35:99:0,102,3579	0/0:88,2:90:99:0,259,8337	0/0:42,0:42:99:0,126,4074	0/0:27,0:27:81.24:0,81,2731	0/0:45,0:45:99:0,108,4387	0/0:35,0:35:99:0,105,3664	0/0:45,0:45:99:0,135,4535	0/0:24,0:24:72.18:0,72,2497	0/0:9,0:9:27.09:0,27,972
chr10	107496294	.	GAAAAAAA	G	973.98	PASS	AB=0.843;AC=8;AF=0.143;AN=56;BaseQRankSum=7.750;DP=335;FS=29.148;HRun=7;HaplotypeScore=84.9497;InbreedingCoeff=0.0742;MQ=50.14;MQ0=11;MQRankSum=-6.075;QD=15.71;ReadPosRankSum=4.565;VQSLOD=-0.7645;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.25:0,81,2531	0/1:2,1:3:65.21:65,0,115	0/0:11,0:2:6.02:0,6,97	0/0:13,0:4:6.02:0,6,125	0/0:19,0:19:45.56:0,46,1375	0/0:10,0:9:27.09:0,27,1008	0/0:16,0:16:45.15:0,45,1687	0/1:9,0:9:21.14:21,0,247	0/0:10,0:9:27.08:0,27,942	0/0:14,0:13:39.11:0,39,1434	0/0:13,0:12:30.53:0,31,832	1/1:0,2:3:9:169,9,0	0/0:9,0:9:21.07:0,21,570	0/0:11,0:11:30.09:0,30,943	0/0:10,0:10:30.06:0,30,882	0/0:4,0:4:12.03:0,12,320	0/0:26,0:25:66.06:0,66,2035	0/0:25,0:25:62.17:0,62,2120	0/1:8,4:11:99:310,0,276	0/1:7,2:8:99:104,0,295	0/1:5,0:6:5.59:6,0,96	0/0:2,0:2:6.02:0,6,130	0/0:7,0:7:21.02:0,21,586	0/0:8,0:9:21.07:0,21,618	0/0:12,0:12:33.06:0,33,932	0/0:14,0:13:36.10:0,36,885	0/1:9,6:13:99:433,0,265	0/0:8,0:7:21.05:0,21,577
chr10	107499200	.	CATGTGT	C	52.05	PASS	AB=0.563;AC=1;AF=0.018;AN=56;BaseQRankSum=4.583;DP=978;FS=1.393;HRun=0;HaplotypeScore=192.9181;InbreedingCoeff=0.3240;MQ=55.83;MQ0=17;MQRankSum=-0.682;QD=1.93;ReadPosRankSum=-2.694;VQSLOD=2.5081;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:85.51:0,86,3239	0/0:15,0:15:39.13:0,39,1312	0/0:53,0:21:44.83:0,45,823	0/0:57,0:15:29.13:0,29,755	0/0:26,0:26:72.14:0,72,2082	0/0:20,0:20:48.13:0,48,1426	0/0:40,0:40:99:0,104,3199	0/0:33,0:32:87.25:0,87,2396	0/0:30,0:30:87.21:0,87,2435	0/0:29,0:29:81.25:0,81,2512	0/0:11,0:11:24.07:0,24,721	0/1:6,21:27:5.89:127,0,6	0/0:33,0:33:87.25:0,87,2629	0/0:34,0:34:90.25:0,90,2589	0/0:37,0:37:99:0,102,3082	0/0:37,0:37:99:0,105,3175	0/0:40,0:40:73.66:0,74,3223	0/0:27,0:27:75.19:0,75,2249	0/0:27,0:25:69.18:0,69,1678	0/0:16,0:16:42.13:0,42,1288	0/0:141,0:142:99:0,373,11578	0/0:24,0:24:66.16:0,66,1983	0/0:20,0:20:57.18:0,57,1813	0/0:49,0:49:99:0,135,3908	0/0:27,0:27:75.23:0,75,2346	0/0:39,0:38:99:0,108,3205	0/0:26,0:26:75.22:0,75,2339	0/0:20,0:20:60.18:0,60,1932
chr10	107499223	.	GTA	G	316.38	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.922;DP=1011;FS=0.000;HRun=0;HaplotypeScore=128.8924;InbreedingCoeff=0.9903;MQ=54.92;MQ0=28;MQRankSum=-0.520;QD=9.89;ReadPosRankSum=-4.024;VQSLOD=2.1191;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,2222	0/0:20,0:20:60.12:0,60,1048	0/0:36,0:10:20.71:0,21,286	0/0:49,0:10:21.04:0,21,296	0/0:34,0:34:99:0,99,1866	0/0:16,0:16:40.93:0,41,763	0/0:40,0:40:99:0,116,1996	0/0:35,0:31:87.23:0,87,1557	0/0:33,0:33:93.20:0,93,1556	0/0:42,0:42:99:0,126,2197	0/0:17,0:17:47.94:0,48,845	1/1:4,28:32:26.15:410,26,0	0/0:29,0:29:87.23:0,87,1532	0/0:32,0:32:93.24:0,93,1615	0/0:37,0:37:99:0,108,1941	0/0:43,0:42:99:0,126,2296	0/0:43,0:43:94.09:0,94,1873	0/0:32,0:32:93.22:0,93,1651	0/0:31,0:26:65.74:0,66,1078	0/0:15,0:15:45.14:0,45,825	0/0:141,0:139:99:0,366,7163	0/0:26,0:26:72.20:0,72,1284	0/0:21,0:21:60.19:0,60,1093	0/0:49,0:49:99:0,135,2463	0/0:28,0:28:66.27:0,66,1393	0/0:42,0:40:99:0,111,1967	0/0:26,0:26:78.25:0,78,1444	0/0:19,0:19:51.11:0,51,898
chr10	107499615	.	TTG	T	55.32	PASS	AB=0.957;AC=7;AF=0.146;AN=48;BaseQRankSum=1.007;DP=672;FS=1.287;HRun=0;HaplotypeScore=88.6103;InbreedingCoeff=0.0322;MQ=53.90;MQ0=25;MQRankSum=0.039;QD=0.29;ReadPosRankSum=1.056;VQSLOD=1.7919;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:44:8.53:9,0,86	0/0:7,0:7:3.01:0,3,33	./.	./.	0/0:12,0:12:3.01:0,3,44	0/0:12,0:12:3.01:0,3,41	0/1:32,1:33:5.13:5,0,273	0/0:30,0:28:3.84:0,4,21	0/1:21,0:21:1.80:2,0,183	0/0:23,0:23:15.03:0,15,187	0/0:19,0:19:6.02:0,6,89	0/0:23,0:23:8.87:0,9,87	0/0:8,0:14:12.02:0,12,139	0/0:16,0:16:17.67:0,18,155	0/0:24,0:24:12.48:0,12,119	0/0:18,0:19:15.02:0,15,195	0/1:31,9:40:61.43:61,0,255	0/0:28,0:29:17.99:0,18,202	./.	./.	0/0:56,0:56:11.86:0,12,90	0/0:25,0:25:5.74:0,6,64	0/0:14,0:13:11.99:0,12,116	0/0:38,0:37:20.02:0,20,195	1/1:16,4:20:9.33:79,9,0	0/1:34,0:34:9.40:9,0,79	0/0:14,0:14:0.79:0,1,42	0/0:13,0:10:14.08:0,14,129
chr10	107500672	.	G	GGTGTGTGT	2711.87	PASS	AB=0.988;AC=15;AF=0.268;AN=56;BaseQRankSum=-1.280;DP=508;FS=2.638;HRun=0;HaplotypeScore=133.4438;InbreedingCoeff=0.6575;MQ=75.55;MQ0=7;MQRankSum=-4.523;QD=13.98;ReadPosRankSum=-3.946;VQSLOD=1.7719;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:39:56.22:0,56,1655	0/1:6,0:6:14.60:31,0,15	0/0:31,0:14:6.94:0,7,27	0/1:45,0:34:11.04:11,0,305	0/0:10,0:10:24.97:0,25,584	0/0:14,0:18:29.15:0,29,845	0/0:30,0:30:54.15:0,54,1223	1/1:32,0:37:65.76:1019,66,0	0/0:14,0:16:30.10:0,30,727	0/0:14,0:14:27.09:0,27,566	0/0:15,0:15:23.72:0,24,435	1/1:4,0:10:12.93:260,13,0	0/0:10,0:10:21.07:0,21,500	0/0:4,0:7:15.05:0,15,343	0/0:13,0:13:18.04:0,18,410	0/0:17,0:17:36.11:0,36,814	0/1:26,0:27:2.34:2,0,1222	0/0:17,0:21:51.15:0,51,1139	1/1:10,1:19:33.08:807,33,0	1/1:8,0:8:6.01:73,6,0	1/1:10,12:26:3.01:125,3,0	0/0:4,0:4:12.04:0,12,251	0/0:4,0:4:6.02:0,6,155	0/0:26,0:27:54.18:0,54,1299	0/0:5,0:7:12.04:0,12,288	0/0:15,0:15:30.09:0,30,711	1/1:4,7:14:15.52:562,16,0	0/0:14,0:15:36.95:0,37,853
chr10	107501118	.	C	CAAG	5936.50	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=1.840;DP=457;FS=0.938;HRun=0;HaplotypeScore=71.3403;InbreedingCoeff=0.9921;MQ=82.52;MQ0=0;MQRankSum=-1.535;QD=51.18;ReadPosRankSum=-0.054;VQSLOD=6.8213;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:96.33:0,96,1568	1/1:0,8:8:14.73:335,15,0	0/0:15,0:15:36.12:0,36,587	0/0:14,0:14:39.13:0,39,620	0/0:19,0:19:50.93:0,51,833	0/0:12,0:12:33.11:0,33,535	0/0:21,0:21:60.18:0,60,925	1/1:3,16:19:48.16:1071,48,0	0/0:11,0:11:30.09:0,30,461	0/0:9,0:9:27.09:0,27,441	0/0:7,0:7:21.06:0,21,319	1/1:1,11:13:33.07:690,33,0	0/0:8,0:8:21.07:0,21,343	0/0:11,0:11:33.11:0,33,536	0/0:12,0:12:36.10:0,36,562	0/0:12,0:12:33.11:0,33,539	0/0:29,0:29:84.29:0,84,1371	0/0:32,0:32:90.29:0,90,1440	1/1:3,18:20:51.18:1136,51,0	1/1:0,10:10:24.08:535,24,0	1/1:7,24:32:72.12:1500,72,0	0/0:14,0:14:39.12:0,39,613	0/0:6,0:6:18.06:0,18,294	0/0:34,0:34:99:0,99,1581	0/0:7,0:7:21.07:0,21,342	0/0:18,0:18:54.18:0,54,882	1/1:3,10:13:30.10:669,30,0	0/0:10,0:10:30.10:0,30,490
chr10	107502663	.	AT	A	2629.25	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.637;DP=496;FS=4.346;HRun=9;HaplotypeScore=47.7324;InbreedingCoeff=0.9917;MQ=71.70;MQ0=0;MQRankSum=-0.423;QD=20.07;ReadPosRankSum=-1.108;VQSLOD=3.7189;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,1479	1/1:1,6:7:18.01:165,18,0	0/0:6,0:7:12.04:0,12,139	0/0:10,0:10:20.91:0,21,230	0/0:18,0:19:47.96:0,48,524	0/0:14,0:14:42.12:0,42,485	0/0:25,0:25:72.16:0,72,807	1/1:8,19:27:54.02:494,54,0	0/0:17,0:17:48.13:0,48,545	0/0:19,0:19:48.14:0,48,554	0/0:16,0:16:39.12:0,39,450	1/1:0,15:15:45.02:412,45,0	0/0:12,0:12:33.10:0,33,381	0/0:10,0:10:27.06:0,27,292	0/0:15,0:15:45.12:0,45,510	0/0:12,0:12:30.09:0,30,346	0/0:26,0:26:63.19:0,63,727	0/0:13,0:13:33.10:0,33,381	1/1:3,15:18:45.02:411,45,0	1/1:6,20:26:54.01:494,54,0	1/1:1,22:23:60.03:549,60,0	0/0:17,0:17:45.12:0,45,510	0/0:13,0:13:33.10:0,33,381	0/0:19,0:19:51.15:0,51,589	0/0:18,0:18:54.16:0,54,623	0/0:20,0:20:51.15:0,51,589	1/1:2,13:15:33.01:302,33,0	0/0:18,0:18:42.12:0,42,485
chr10	107503813	.	GT	G	1714.72	PASS	AB=0.969;AC=14;AF=0.250;AN=56;BaseQRankSum=5.228;DP=555;FS=14.436;HRun=10;HaplotypeScore=69.9261;InbreedingCoeff=0.7661;MQ=68.23;MQ0=14;MQRankSum=-0.210;QD=10.65;ReadPosRankSum=-0.391;VQSLOD=1.0362;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:48:99:0,113,1134	0/0:8,0:8:15.03:0,15,157	0/1:25,0:11:15.45:40,0,15	0/0:28,0:15:21.76:0,22,177	0/0:21,0:21:42.10:0,42,454	0/0:18,0:18:36.02:0,36,371	0/0:21,0:21:47.90:0,48,499	1/1:10,14:24:11.75:336,12,0	0/0:14,0:14:33.07:0,33,349	0/0:20,0:20:48.13:0,48,531	0/0:11,0:11:20.92:0,21,214	1/1:12,9:21:37.73:357,38,0	0/0:14,0:12:27.54:0,28,300	0/0:24,0:23:39.09:0,39,420	0/0:14,0:14:30.05:0,30,315	0/0:17,0:17:36.55:0,37,383	0/0:26,0:26:59.69:0,60,654	0/0:25,0:25:54.82:0,55,573	1/1:11,6:14:29.65:260,30,0	1/1:13,8:21:11.58:314,12,0	1/1:16,4:19:10.42:237,10,0	0/0:14,0:14:36.10:0,36,398	0/1:14,1:14:18.69:19,0,265	0/0:19,0:19:10.12:0,10,327	0/0:16,1:17:13:0,13,349	0/0:26,0:26:53.33:0,53,548	1/1:9,9:17:40.52:338,41,0	0/0:7,0:5:9.02:0,9,98
chr10	107503831	.	G	GT	952.82	PASS	AB=0.878;AC=17;AF=0.304;AN=56;BaseQRankSum=3.203;DP=543;FS=2.350;HRun=14;HaplotypeScore=66.1226;InbreedingCoeff=0.0206;MQ=64.81;MQ0=18;MQRankSum=-1.234;QD=4.04;ReadPosRankSum=-0.484;VQSLOD=0.9029;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:82.12:0,82,498	0/0:9,0:10:0.26:0,0,97	0/0:36,0:9:8.90:0,9,50	0/0:32,0:18:6.44:0,6,84	0/0:15,2:17:16.78:0,17,182	0/1:13,1:14:19.67:20,0,104	0/0:17,0:17:8.64:0,9,178	0/1:21,1:24:8.67:146,0,9	0/0:16,0:16:24.53:0,25,145	0/1:15,3:20:32.60:33,0,169	0/0:13,0:13:20.48:0,20,130	0/1:17,6:24:0.29:213,0,0	0/1:11,1:11:12.63:13,0,49	0/1:14,1:18:20.19:20,0,75	0/0:11,0:11:23.58:0,24,154	0/0:12,0:13:25.61:0,26,159	0/0:29,0:30:54.69:0,55,338	0/0:21,0:22:4.96:0,5,151	1/1:13,5:15:30:262,30,0	1/1:15,1:16:0.35:98,0,0	1/1:10,0:9:11.97:99,12,0	0/1:10,2:12:29.09:29,0,92	0/0:14,0:15:22.62:0,23,140	0/0:23,2:25:16.74:0,17,228	0/1:14,2:17:19.93:20,0,105	0/1:21,1:27:14.42:14,0,222	0/1:13,2:15:29.85:132,0,30	0/1:5,1:4:17.45:17,0,30
chr10	107504207	.	CTG	C	388.86	PASS	AB=0.907;AC=20;AF=0.357;AN=56;BaseQRankSum=5.780;DP=684;FS=6.080;HRun=0;HaplotypeScore=106.0127;InbreedingCoeff=-0.0031;MQ=65.50;MQ0=15;MQRankSum=-0.134;QD=0.90;ReadPosRankSum=0.752;VQSLOD=1.4127;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,5:35:62.75:63,0,317	0/1:9,2:11:50.86:51,0,113	0/0:25,0:18:0.89:0,1,2	0/1:29,0:16:0:0,0,0	0/1:22,0:22:44.40:44,0,175	0/1:26,4:30:71.79:72,0,222	0/0:28,0:29:15.95:0,16,390	0/0:23,0:25:1.81:0,2,5	0/1:20,1:22:37.70:38,0,453	0/0:26,0:25:21.05:0,21,277	0/0:11,0:11:18.03:0,18,226	0/0:25,0:29:42.11:0,42,568	0/0:15,0:16:6:0,6,71	0/0:25,0:24:23.87:0,24,326	0/1:20,3:24:8.87:9,0,272	0/0:21,2:23:3.13:0,3,420	0/1:35,3:38:5.75:6,0,698	0/1:14,1:15:11.89:12,0,245	1/1:18,0:20:5.68:28,6,0	0/1:9,0:14:0:0,0,0	0/1:62,0:62:0:0,0,0	0/1:20,5:25:62.73:63,0,356	0/0:14,0:13:12.02:0,12,151	0/1:35,4:40:14.74:15,0,597	1/1:8,0:14:8.52:42,9,0	0/0:27,0:27:15.05:0,15,225	1/1:7,0:17:16.95:82,17,0	0/1:10,0:10:17.92:18,0,139
chr10	107504452	.	GC	G	2947.99	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=13.048;DP=783;FS=14.530;HRun=1;HaplotypeScore=82.7839;InbreedingCoeff=0.9581;MQ=51.44;MQ0=65;MQRankSum=-8.889;QD=22.00;ReadPosRankSum=-2.121;VQSLOD=2.1981;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,165,2554	0/0:16,0:16:45.15:0,45,707	./.	0/0:32,0:2:3.01:0,3,31	0/0:21,0:21:60.20:0,60,957	0/0:18,0:18:54.18:0,54,863	0/0:40,0:38:99:0,99,1557	1/1:16,17:17:42.14:586,42,0	0/0:30,0:29:87.30:0,87,1391	0/0:33,0:32:96.33:0,96,1532	0/0:16,0:15:42.14:0,42,651	0/0:33,0:33:63.21:0,63,1006	0/0:18,0:18:51.17:0,51,810	0/0:30,0:28:81.28:0,81,1289	0/0:40,0:40:99:0,117,1848	0/0:31,0:31:93.27:0,93,1437	0/0:34,0:33:96.33:0,96,1535	0/0:29,0:29:87.30:0,87,1391	1/1:4,10:9:18.05:236,18,0	1/1:0,22:22:48.16:670,48,0	1/1:1,38:32:66.22:919,66,0	0/0:26,0:26:69.09:0,69,1077	0/0:20,0:20:57.19:0,57,911	0/0:33,0:33:99:0,99,1551	0/0:21,0:20:57.19:0,57,911	0/0:34,0:34:99:0,102,1630	1/1:0,26:26:51.17:709,51,0	0/0:13,0:11:33.11:0,33,528
chr10	107504630	.	GT	G	101.87	PASS	AB=0.688;AC=1;AF=0.018;AN=56;BaseQRankSum=4.493;DP=774;FS=18.201;HRun=1;HaplotypeScore=73.7357;InbreedingCoeff=-0.0303;MQ=52.22;MQ0=34;MQRankSum=-3.831;QD=9.26;ReadPosRankSum=-2.546;VQSLOD=-0.5399;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:59:99:0,156,2392	0/0:8,0:8:24.08:0,24,383	0/0:16,0:1:3.01:0,3,43	0/0:28,1:2:5.99:0,6,68	0/0:28,1:28:36.53:0,37,1064	0/0:23,0:23:66.22:0,66,1042	0/0:29,0:29:71.98:0,72,1132	0/0:40,0:11:33.08:0,33,491	0/0:32,0:31:93.29:0,93,1439	0/0:22,0:22:66.22:0,66,1049	0/0:10,0:10:30.09:0,30,456	0/0:38,0:38:99:0,111,1743	0/0:34,0:34:93.21:0,93,1418	0/0:31,0:31:90.29:0,90,1410	0/0:38,0:37:99:0,108,1668	0/0:30,0:27:81.28:0,81,1292	0/0:34,0:33:99:0,99,1528	0/0:24,0:24:69.23:0,69,1094	0/0:25,1:18:9.25:0,9,691	0/0:24,0:24:72.25:0,72,1149	0/0:39,0:35:81.23:0,81,1263	0/0:27,0:27:81.26:0,81,1271	0/0:16,0:16:45.15:0,45,716	0/0:35,0:35:96.27:0,96,1478	0/0:16,0:15:42.12:0,42,627	0/0:27,0:26:78.26:0,78,1225	0/0:25,0:22:57.18:0,57,883	0/1:6,5:11:99:176,0,243
chr10	107505435	.	TGA	T	543.40	PASS	AB=0.944;AC=20;AF=0.455;AN=44;BaseQRankSum=2.788;DP=519;FS=5.037;HRun=0;HaplotypeScore=91.9510;InbreedingCoeff=0.4396;MQ=76.88;MQ0=10;MQRankSum=0.059;QD=2.09;ReadPosRankSum=1.752;VQSLOD=1.4254;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:44,1:45:11.34:86,11,0	1/1:4,0:5:4.88:20,5,0	./.	0/1:67,0:37:0:0,0,0	1/1:11,0:11:3.01:32,3,0	1/1:13,0:13:8.96:75,9,0	0/0:26,0:28:9.91:0,10,213	./.	1/1:11,2:13:5.85:46,6,0	0/0:15,0:15:5.93:0,6,61	./.	0/1:9,0:11:0:0,0,0	1/1:20,1:19:6.90:66,7,0	0/1:12,1:13:34.71:54,0,35	./.	0/0:10,0:10:2.99:0,3,24	0/1:13,0:14:12.34:12,0,220	1/1:10,0:14:5.44:24,5,0	./.	0/0:10,0:10:5.99:0,6,49	0/0:29,0:29:16.21:0,16,141	./.	0/0:12,0:12:3.01:0,3,43	1/1:23,7:31:29.35:273,29,0	0/0:12,0:12:3.01:0,3,44	0/0:18,0:18:6.02:0,6,86	0/0:10,0:10:8.77:0,9,98	0/0:5,0:5:3.01:0,3,39
chr10	107505657	.	T	TGG	437.55	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.559;DP=628;FS=6.150;HRun=8;HaplotypeScore=87.7627;InbreedingCoeff=0.9679;MQ=87.23;MQ0=0;MQRankSum=-2.402;QD=20.84;ReadPosRankSum=1.455;VQSLOD=2.3548;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,1106	0/0:6,0:6:11.99:0,12,123	0/0:24,0:24:51.10:0,51,558	0/0:22,0:22:43.86:0,44,451	0/0:12,0:12:30.07:0,30,330	0/0:21,0:22:36.01:0,36,378	0/0:30,0:30:75.15:0,75,814	0/0:30,0:30:57.06:0,57,592	0/0:27,0:27:78.18:0,78,850	0/0:24,0:24:48.10:0,48,535	0/0:10,0:10:30.07:0,30,325	1/1:2,17:21:35.55:532,36,0	0/0:27,0:27:69.10:0,69,734	0/0:26,0:26:63.09:0,63,689	0/0:20,0:20:42.08:0,42,459	0/0:15,0:15:42.08:0,42,449	0/0:30,0:30:72.16:0,72,793	0/0:20,0:20:54.14:0,54,602	0/0:34,0:35:89.34:0,89,914	0/0:18,0:18:33.07:0,33,357	0/0:52,0:52:99:0,141,1547	0/0:17,0:17:33.05:0,33,358	0/0:20,0:20:48.11:0,48,525	0/0:20,0:20:60.16:0,60,669	0/0:17,0:17:39.09:0,39,435	0/0:18,0:18:51.14:0,51,568	0/0:16,0:16:45.11:0,45,502	0/0:11,0:11:33.09:0,33,368
chr10	107506766	.	CGTGT	C	2573.91	PASS	AB=0.933;AC=11;AF=0.196;AN=56;BaseQRankSum=8.150;DP=569;FS=5.791;HRun=0;HaplotypeScore=99.2468;InbreedingCoeff=0.8562;MQ=55.69;MQ0=4;MQRankSum=-3.335;QD=21.45;ReadPosRankSum=0.099;VQSLOD=3.0776;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:45.15:0,45,978	0/0:13,0:15:11.25:0,11,196	0/0:19,0:11:9.03:0,9,174	0/0:16,0:6:6.91:0,7,140	0/0:29,0:29:48.15:0,48,1062	0/0:15,0:15:33.11:0,33,806	0/0:24,0:24:60.17:0,60,1281	1/1:6,18:24:48.03:677,48,0	0/0:18,0:19:41.88:0,42,960	0/0:24,0:25:50.80:0,51,889	0/0:17,0:18:32.83:0,33,671	0/0:18,0:35:35.15:0,35,525	0/0:10,0:10:18.06:0,18,427	0/0:9,0:9:27.09:0,27,620	0/0:15,0:15:36.12:0,36,856	0/0:15,0:16:38.87:0,39,882	0/0:39,0:41:86.97:0,87,1843	0/0:18,0:17:33.54:0,34,706	1/1:11,11:22:32.36:411,32,0	1/1:4,13:18:27.09:422,27,0	1/1:4,13:17:24.08:394,24,0	0/0:21,0:23:57.17:0,57,1276	0/0:20,0:21:50.26:0,50,1005	0/0:26,0:26:62.87:0,63,1358	0/0:11,0:10:21.06:0,21,431	0/1:13,1:14:10.12:10,0,809	1/1:5,19:24:51.17:836,51,0	0/0:15,0:16:38.87:0,39,884
chr10	107507320	.	T	TG	2998.59	PASS	AB=0.833;AC=41;AF=0.932;AN=44;BaseQRankSum=-1.732;DP=131;FS=0.000;HRun=3;HaplotypeScore=54.4230;InbreedingCoeff=0.1398;MQ=61.50;MQ0=0;MQRankSum=-1.689;QD=25.20;ReadPosRankSum=1.689;VQSLOD=2.7491;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:10:27.08:318,27,0	1/1:0,1:1:3.01:38,3,0	0/1:3,0:3:4.22:40,0,4	0/1:3,0:3:0:0,0,0	0/1:0,5:5:0:0,0,0	1/1:0,1:1:3.01:35,3,0	1/1:1,9:10:27.08:321,27,0	1/1:2,9:11:29.97:398,30,0	1/1:1,5:6:12.04:141,12,0	1/1:2,4:6:18.02:248,18,0	./.	1/1:3,9:12:21.05:238,21,0	./.	1/1:0,6:6:3.01:35,3,0	./.	1/1:0,5:5:12.04:146,12,0	1/1:1,1:2:3.01:35,3,0	1/1:1,3:4:9.03:128,9,0	1/1:2,5:7:21.07:317,21,0	1/1:1,2:3:3.01:45,3,0	1/1:2,3:5:6.01:69,6,0	1/1:1,1:2:3.01:35,3,0	./.	./.	1/1:2,6:8:15.04:178,15,0	1/1:0,5:5:15.05:231,15,0	1/1:1,3:4:6.02:80,6,0	./.
chr10	107508356	.	TTAA	T	137.49	PASS	AB=0.750;AC=1;AF=0.018;AN=56;BaseQRankSum=3.974;DP=581;FS=0.988;HRun=0;HaplotypeScore=101.9720;InbreedingCoeff=0.4321;MQ=62.21;MQ0=9;MQRankSum=-1.767;QD=11.46;ReadPosRankSum=0.577;VQSLOD=3.1475;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:72.16:0,72,1188	0/0:2,0:2:6:0,6,52	0/0:38,0:11:14.43:0,14,188	0/0:26,0:15:3.89:0,4,189	0/0:15,0:15:35.90:0,36,548	0/0:24,0:23:69.06:0,69,1235	0/0:13,0:13:39.10:0,39,735	0/0:33,0:32:70.90:0,71,844	0/0:17,0:17:51.08:0,51,917	0/0:31,0:31:90.13:0,90,1520	0/0:18,0:18:54.11:0,54,990	0/1:8,4:12:1.96:212,0,2	0/0:20,0:19:57.16:0,57,979	0/0:18,0:18:48.07:0,48,756	0/0:18,0:17:45.07:0,45,702	0/0:25,0:25:74.96:0,75,1455	0/0:38,0:38:96.22:0,96,1798	0/0:36,0:36:99:0,99,1807	0/0:17,0:16:45.05:0,45,512	0/0:24,0:24:48.52:0,49,569	0/0:2,0:2:1.25:0,1,3	0/0:12,0:11:33.07:0,33,600	0/0:18,0:18:51.04:0,51,940	0/0:18,0:17:51.10:0,51,766	0/0:15,0:14:42.13:0,42,802	0/0:26,0:26:75.19:0,75,1115	0/0:26,0:26:63.94:0,64,674	0/0:14,0:13:36.10:0,36,612
chr10	107508357	.	TA	T	563.96	PASS	AB=0.950;AC=7;AF=0.125;AN=56;BaseQRankSum=4.848;DP=618;FS=4.386;HRun=14;HaplotypeScore=95.3167;InbreedingCoeff=0.4460;MQ=61.93;MQ0=11;MQRankSum=-2.792;QD=4.55;ReadPosRankSum=0.940;VQSLOD=2.3484;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:49.04:0,49,397	0/0:5,0:4:1.25:0,1,3	0/0:38,1:11:2.19:0,2,57	0/0:28,0:16:6.48:0,6,76	0/1:15,1:16:6.34:6,0,170	0/0:22,2:23:8.67:0,9,356	0/0:13,0:14:26.87:0,27,237	0/1:33,1:33:6.71:183,0,7	0/0:18,0:18:23.45:0,23,294	0/0:28,1:30:45.77:0,46,529	0/0:19,0:19:21.14:0,21,307	0/0:14,0:14:7.41:0,7,65	0/0:20,0:19:40.74:0,41,358	0/0:19,0:19:29.27:0,29,268	0/0:19,0:18:31.77:0,32,260	0/0:28,0:28:51.11:0,51,526	0/0:40,0:40:74.70:0,75,636	0/0:36,0:36:42.91:0,43,553	1/1:17,2:17:28.23:166,28,0	1/1:21,4:25:40.05:228,40,0	0/0:2,0:2:2.74:0,3,12	0/0:12,0:11:23.95:0,24,212	0/0:18,0:20:40:0,40,313	0/0:19,0:18:31.71:0,32,252	0/0:12,2:14:18.18:0,18,274	0/0:27,0:28:36.90:0,37,326	0/1:28,2:30:25.53:117,0,26	0/0:14,2:15:14.92:0,15,236
chr10	107508367	.	A	AAC	248.31	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=5.880;DP=671;FS=7.294;HRun=0;HaplotypeScore=111.8904;InbreedingCoeff=0.5005;MQ=61.25;MQ0=16;MQRankSum=-1.523;QD=2.53;ReadPosRankSum=-0.163;VQSLOD=1.8244;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:65.90:0,66,738	0/0:4,0:3:3.40:0,3,18	0/1:50,0:11:2.18:2,0,74	0/1:30,0:18:5.53:6,0,79	0/0:24,0:24:58.32:0,58,608	0/0:24,0:22:62.87:0,63,716	0/0:11,0:11:32.95:0,33,395	0/0:37,0:35:61.10:0,61,520	0/0:20,0:20:56.98:0,57,642	0/0:36,0:32:79.57:0,80,965	0/0:18,0:18:50.98:0,51,593	1/1:8,10:18:11.62:333,12,0	0/0:20,0:19:57.06:0,57,638	0/0:19,0:19:50.91:0,51,557	0/0:21,0:20:51.05:0,51,559	0/0:28,0:28:81.21:0,81,1004	0/0:39,0:39:89.99:0,90,1089	0/0:36,0:35:91.57:0,92,1089	0/0:24,0:21:47.30:0,47,361	0/0:29,0:29:17.33:0,17,361	0/0:4,0:3:0.43:0,0,1	0/0:13,0:12:33.18:0,33,374	0/0:24,0:24:69.08:0,69,771	0/0:20,0:19:48.07:0,48,523	0/0:17,0:16:43.28:0,43,460	0/0:29,0:28:83.69:0,84,795	0/0:28,0:28:54.89:0,55,388	0/0:24,0:23:64.22:0,64,610
chr10	107508372	.	C	CA	867.19	PASS	AB=0.976;AC=22;AF=0.393;AN=56;BaseQRankSum=7.329;DP=683;FS=5.620;HRun=14;HaplotypeScore=97.3914;InbreedingCoeff=0.2618;MQ=58.60;MQ0=16;MQRankSum=-2.946;QD=2.08;ReadPosRankSum=-3.919;VQSLOD=-0.6292;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:21,3:23:46.86:47,0,191	1/1:4,0:3:0.89:2,1,0	1/1:49,0:9:1.85:12,2,0	0/1:27,0:17:25.68:30,0,26	0/1:26,0:26:34.29:34,0,234	0/0:24,1:23:30.38:0,30,381	0/0:11,0:11:20.50:0,20,141	1/1:32,5:35:22.95:186,23,0	0/0:22,0:22:11.79:0,12,248	0/1:35,1:32:92.62:93,0,236	0/0:19,0:19:14.72:0,15,259	0/0:19,0:19:22.44:0,22,120	0/1:20,0:19:6.38:6,0,106	0/0:19,0:19:0.15:0,0,85	0/0:21,0:20:36.11:0,36,250	0/0:25,0:27:41.26:0,41,254	0/1:38,1:40:46.71:47,0,333	0/1:35,1:36:54.79:55,0,318	1/1:24,0:21:15.28:151,15,0	1/1:29,2:31:19.64:196,20,0	1/1:5,0:3:2.77:13,3,0	0/0:13,0:12:28.72:0,29,191	0/1:24,0:24:11.40:11,0,225	0/0:21,0:20:5.85:0,6,210	0/0:16,0:17:26.66:0,27,187	0/0:28,0:27:50.71:0,51,404	1/1:28,1:29:21.81:162,22,0	0/0:25,0:24:55.06:0,55,389
chr10	107508383	.	AAC	A	1289.01	PASS	AB=0.964;AC=13;AF=0.232;AN=56;BaseQRankSum=8.715;DP=672;FS=35.006;HRun=0;HaplotypeScore=105.6943;InbreedingCoeff=0.4243;MQ=58.90;MQ0=15;MQRankSum=-2.937;QD=6.17;ReadPosRankSum=-7.790;VQSLOD=-0.6895;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:21:0.91:1,0,518	1/1:4,0:3:4.82:31,5,0	0/1:37,0:11:16.31:16,0,89	0/0:27,0:18:3.53:0,4,183	0/0:29,0:29:69.18:0,69,861	0/0:27,0:26:69.02:0,69,915	0/0:13,0:13:33.01:0,33,428	1/1:31,8:36:76.77:639,77,0	0/0:23,0:23:59.75:0,60,776	0/0:35,0:31:60.48:0,60,918	0/0:20,0:20:50.93:0,51,685	0/1:19,0:19:38.78:47,0,39	0/0:14,0:13:6.71:0,7,413	0/0:18,0:18:24.81:0,25,406	0/0:20,0:19:39.36:0,39,569	0/0:25,0:25:62.82:0,63,783	0/0:46,0:46:92.70:0,93,1195	0/0:33,0:32:34.94:0,35,864	1/1:23,4:24:41.84:366,42,0	0/1:25,5:30:11.52:263,0,12	1/1:3,3:4:2.37:8,2,0	0/0:13,0:12:32.92:0,33,441	0/0:27,0:27:39.23:0,39,720	0/0:20,0:20:43.61:0,44,715	0/0:17,0:17:35.36:0,35,458	0/0:28,0:27:56.07:0,56,818	0/1:24,1:25:41.70:75,0,42	0/0:28,0:27:71.57:0,72,1018
chr10	107508385	.	C	CAA	3862.77	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=3.903;DP=652;FS=23.663;HRun=12;HaplotypeScore=106.5747;InbreedingCoeff=0.8797;MQ=60.32;MQ0=15;MQRankSum=-2.562;QD=24.76;ReadPosRankSum=-4.085;VQSLOD=0.6676;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:12.06:0,12,538	1/1:4,0:3:3.06:8,3,0	0/0:33,0:11:8.84:0,9,172	0/0:27,0:19:0.78:0,1,204	0/0:29,0:29:75.64:0,76,976	0/0:26,0:25:68.65:0,69,881	0/0:12,0:12:36.10:0,36,487	1/1:18,24:42:98.16:1269,98,0	0/0:21,0:21:58.56:0,59,717	0/0:35,0:31:74.88:0,75,953	0/0:18,0:18:48.14:0,48,655	1/1:18,1:19:27.63:407,28,0	0/0:13,0:12:31.82:0,32,427	0/0:17,0:17:39.46:0,39,457	0/0:18,0:17:40.84:0,41,535	0/0:23,0:23:61.86:0,62,771	0/0:40,0:40:84.09:0,84,1184	0/0:32,0:31:74.82:0,75,886	1/1:11,15:24:62.04:727,62,0	1/1:10,19:30:58.71:769,59,0	1/1:6,0:4:3.07:11,3,0	0/0:13,0:12:33.02:0,33,433	0/0:25,0:25:64.35:0,64,839	0/0:19,0:19:49.39:0,49,673	0/0:14,0:14:36.07:0,36,472	0/0:30,0:29:53.38:0,53,755	1/1:5,19:25:42.54:672,43,0	0/0:28,0:27:71.48:0,71,1031
chr10	107511556	.	T	TG	290.72	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=2.713;DP=446;FS=5.773;HRun=8;HaplotypeScore=144.0981;InbreedingCoeff=0.8683;MQ=76.16;MQ0=0;MQRankSum=-4.008;QD=17.10;ReadPosRankSum=-0.416;VQSLOD=2.1833;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:77.97:0,78,703	0/1:1,0:1:0:0,0,0	0/0:19,0:18:32.99:0,33,355	0/0:20,1:19:41.76:0,42,368	0/0:15,0:15:33.02:0,33,302	0/0:12,0:12:33.01:0,33,302	0/0:20,0:20:35.74:0,36,329	0/0:19,0:19:23.97:0,24,219	0/0:16,0:16:45:0,45,406	0/0:17,0:17:33:0,33,302	0/0:8,0:8:18:0,18,162	1/1:3,13:16:35.92:385,36,0	0/0:16,0:16:35.95:0,36,316	0/0:19,0:19:45.02:0,45,410	0/0:16,0:16:42.01:0,42,384	0/0:10,0:10:27.01:0,27,247	0/0:20,0:20:54.03:0,54,493	0/0:24,0:24:60.02:0,60,548	0/0:14,0:14:33.01:0,33,302	0/0:12,0:12:21.01:0,21,192	0/0:20,0:20:33:0,33,293	0/0:13,0:13:27.01:0,27,247	0/0:12,0:12:26.93:0,27,236	0/0:14,0:14:42.02:0,42,383	0/0:14,0:14:27.01:0,27,247	0/0:16,0:16:36.01:0,36,329	0/0:16,0:16:38.99:0,39,350	0/0:11,0:11:30.01:0,30,275
chr10	107512186	.	AGTGAGT	A	541.01	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.352;DP=1135;FS=4.910;HRun=0;HaplotypeScore=260.5287;InbreedingCoeff=0.9998;MQ=65.28;MQ0=0;MQRankSum=-2.787;QD=15.91;ReadPosRankSum=-3.173;VQSLOD=2.5139;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:95.43:0,95,3140	0/0:16,0:16:48.16:0,48,1560	0/0:52,0:46:79.42:0,79,2346	0/0:63,0:53:99:0,110,2811	0/0:50,0:50:99:0,135,4083	0/0:26,0:26:56.84:0,57,2124	0/0:29,0:29:72.25:0,72,2344	0/0:44,0:44:99:0,111,3250	0/0:51,0:51:99:0,141,4514	0/0:38,0:38:99:0,114,3542	0/0:28,0:28:66.23:0,66,2119	1/1:17,17:33:35.58:636,36,0	0/0:44,0:44:99:0,123,3695	0/0:52,0:52:99:0,135,4284	0/0:58,0:58:99:0,122,4388	0/0:62,0:62:99:0,175,5420	0/0:46,0:46:94.26:0,94,3206	0/0:23,0:23:57.05:0,57,1572	0/0:25,0:25:66.21:0,66,1790	0/0:21,0:21:57.20:0,57,1902	0/0:77,0:77:99:0,176,5716	0/0:42,0:42:99:0,114,3586	0/0:24,0:24:54.18:0,54,1668	0/0:44,0:44:99:0,111,3467	0/0:19,0:19:45.15:0,45,1406	0/0:54,0:54:99:0,144,4548	0/0:42,0:40:99:0,105,3425	0/0:21,0:21:48.14:0,48,1432
chr10	107512285	.	A	ATG	1470.77	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.426;DP=1067;FS=4.098;HRun=0;HaplotypeScore=131.2649;InbreedingCoeff=0.9999;MQ=59.66;MQ0=3;MQRankSum=-1.320;QD=35.87;ReadPosRankSum=0.965;VQSLOD=5.7268;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,144,1797	0/0:19,0:19:54.16:0,54,673	0/0:40,0:33:48.16:0,48,594	0/0:57,0:47:89.39:0,89,1040	0/0:32,0:32:84.22:0,84,1026	0/0:29,0:29:45.97:0,46,803	0/0:26,0:26:66.20:0,66,826	0/0:40,0:40:96.26:0,96,1153	0/0:36,0:36:87.26:0,87,1088	0/0:57,0:57:99:0,144,1798	0/0:30,0:30:78.72:0,79,988	1/1:6,34:40:96.31:1566,96,0	0/0:39,0:39:93.28:0,93,1169	0/0:37,0:37:99:0,99,1230	0/0:52,0:52:99:0,138,1714	0/0:39,0:39:99:0,105,1309	0/0:34,0:34:49.58:0,50,1066	0/0:28,0:28:69.17:0,69,843	0/0:28,0:28:63.15:0,63,770	0/0:22,0:22:57.08:0,57,653	0/0:69,0:69:99:0,162,2042	0/0:46,0:46:99:0,108,1347	0/0:17,0:17:45.13:0,45,558	0/0:72,0:71:99:0,178,2252	0/0:32,0:32:75.24:0,75,954	0/0:44,0:44:99:0,126,1565	0/0:28,0:28:72.23:0,72,911	0/0:16,0:16:39.12:0,39,496
chr10	107512733	.	T	TCACTGCTC	13194.49	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-12.404;DP=655;FS=0.000;HRun=0;HaplotypeScore=146.5690;InbreedingCoeff=0.9992;MQ=78.93;MQ0=0;MQRankSum=-11.689;QD=83.51;ReadPosRankSum=-3.989;VQSLOD=4.3191;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,2803	0/0:9,0:9:27.08:0,27,682	0/0:16,0:16:44.91:0,45,1038	0/0:20,0:20:57.18:0,57,1230	0/0:18,0:18:48.16:0,48,1213	0/0:21,0:21:63.20:0,63,1747	0/0:41,0:41:99:0,117,3197	1/1:2,21:33:87.26:2766,87,0	0/0:26,0:26:75.24:0,75,1947	0/0:28,0:28:84.28:0,84,2079	0/0:13,0:13:39.13:0,39,1047	1/1:1,25:32:69.24:3044,69,0	0/0:18,0:18:54.19:0,54,1549	0/0:25,0:25:72.25:0,72,1970	0/0:23,0:23:66.22:0,66,1803	0/0:26,0:26:78.25:0,78,2146	0/0:29,0:29:87.29:0,87,2350	0/0:25,0:25:75.26:0,75,2097	1/1:2,18:29:81.24:2730,81,0	1/1:0,17:22:42.14:1829,42,0	1/1:5,10:19:24.08:969,24,0	0/0:25,0:25:72.25:0,72,2055	0/0:21,0:21:60.21:0,60,1557	0/0:15,0:15:42.14:0,42,1113	0/0:15,0:15:45.14:0,45,1231	0/0:35,0:35:99:0,102,2654	1/1:1,16:23:42.14:1857,42,0	0/0:10,0:10:30.10:0,30,861
chr10	107513632	.	GAC	G	539.76	PASS	AB=0.949;AC=18;AF=0.346;AN=52;BaseQRankSum=3.399;DP=680;FS=13.606;HRun=0;HaplotypeScore=96.1647;InbreedingCoeff=-0.1257;MQ=51.54;MQ0=23;MQRankSum=2.299;QD=1.41;ReadPosRankSum=-0.795;VQSLOD=0.6895;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:6.04:6,0,266	0/1:8,0:10:13.63:27,0,14	./.	./.	0/1:16,0:16:5.81:6,0,39	0/1:20,0:20:66.15:66,0,203	0/0:37,5:41:23.63:0,24,272	0/0:38,0:37:13.12:0,13,84	1/1:9,0:22:19.75:97,20,0	1/1:16,9:25:11.97:129,12,0	0/1:11,0:11:23.85:24,0,57	1/1:21,0:28:2.03:25,2,0	0/1:11,2:12:50.59:51,0,113	0/0:25,0:25:0.19:0,0,333	0/0:24,0:23:35.75:0,36,379	0/1:23,0:24:32.56:33,0,320	0/1:41,1:42:56.66:57,0,496	0/0:20,3:23:0.23:0,0,390	0/0:18,0:18:11.92:0,12,98	0/0:14,0:13:3.47:0,3,26	0/1:58,0:55:20.23:20,0,52	0/1:15,4:19:12.92:86,0,13	0/0:10,0:10:11.98:0,12,135	0/1:40,2:42:41.54:42,0,580	0/1:24,0:26:25.87:26,0,128	0/0:25,0:25:23.25:0,23,247	0/0:15,0:17:17.32:0,17,110	0/0:11,0:9:10.29:0,10,168
chr10	107514473	.	GC	G	952.09	PASS	AB=0.930;AC=25;AF=0.446;AN=56;BaseQRankSum=2.528;DP=333;FS=7.945;HRun=11;HaplotypeScore=46.1027;InbreedingCoeff=0.1062;MQ=73.30;MQ0=0;MQRankSum=-1.598;QD=4.25;ReadPosRankSum=1.533;VQSLOD=0.0070;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:10,1:11:31.03:31,0,102	0/1:10,1:11:9.61:10,0,106	0/0:11,0:10:10.93:0,11,75	0/1:12,0:11:5.79:6,0,114	0/0:6,0:6:6.48:0,6,58	0/0:16,0:16:24.02:0,24,232	0/1:12,3:15:31.86:32,0,287	1/1:13,5:18:11.80:89,12,0	0/1:10,0:11:3.50:4,0,171	0/1:7,0:7:0.01:0,0,0	0/1:5,1:6:18.59:19,0,26	1/1:6,12:18:38.89:314,39,0	0/0:10,0:10:19.39:0,19,188	0/0:13,0:14:27.05:0,27,275	0/0:13,1:14:2.35:0,2,186	0/0:11,0:12:27.36:0,27,265	0/1:12,1:13:0.60:1,0,185	0/1:13,3:16:20.63:21,0,191	1/1:9,4:16:5.51:137,6,0	1/1:0,6:6:11.98:98,12,0	1/1:4,9:13:23.93:197,24,0	0/1:9,1:10:9.67:10,0,92	0/1:7,0:7:12.23:12,0,72	0/0:16,1:17:5.89:0,6,249	0/1:13,2:15:28.29:28,0,100	0/1:10,0:10:15.27:15,0,49	1/1:3,5:9:14.02:104,14,0	0/0:9,0:9:23.99:0,24,223
chr10	107515713	.	A	ATG	5231.98	PASS	AB=0.740;AC=25;AF=0.481;AN=52;BaseQRankSum=-7.729;DP=713;FS=3.392;HRun=0;HaplotypeScore=127.5334;InbreedingCoeff=-0.0093;MQ=63.84;MQ0=6;MQRankSum=3.904;QD=10.38;ReadPosRankSum=-0.105;VQSLOD=4.7027;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,25:39:45.15:672,45,0	0/0:8,0:18:17.03:0,17,84	./.	./.	0/1:15,5:21:17.84:148,0,18	0/1:12,7:19:47.64:143,0,48	0/1:17,8:26:49.73:102,0,50	0/0:27,0:27:5.94:0,6,43	1/1:11,6:18:12.04:179,12,0	0/1:19,12:32:17.64:385,0,18	1/1:10,10:21:15.05:224,15,0	0/0:8,0:20:17:0,17,83	0/1:15,7:24:6.39:295,0,6	0/1:15,14:29:36.51:449,0,37	0/1:19,10:29:71.57:238,0,72	0/1:14,10:26:22.83:244,0,23	1/1:26,20:48:47.29:696,47,0	1/1:15,4:20:10.16:258,10,0	0/1:10,0:17:27.25:49,0,27	0/0:5,0:18:19.89:0,20,98	1/1:18,0:28:3:29,3,0	0/1:13,10:24:20.81:122,0,21	0/0:19,0:20:23.88:0,24,235	0/0:34,0:33:56.58:0,57,604	0/1:13,12:28:16.89:329,0,17	0/1:19,12:32:34.71:469,0,35	0/0:12,0:32:22.62:0,23,111	0/1:13,7:20:1.72:199,0,2
chr10	107516954	.	TACCCG	T	3960.09	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.441;DP=527;FS=2.910;HRun=0;HaplotypeScore=106.1635;InbreedingCoeff=0.9927;MQ=82.03;MQ0=0;MQRankSum=-7.808;QD=40.00;ReadPosRankSum=-0.300;VQSLOD=3.5838;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.26:0,75,2219	0/0:8,0:8:14.91:0,15,443	0/0:16,0:16:39.13:0,39,1081	0/0:18,0:18:26.50:0,27,815	0/0:18,0:18:48.16:0,48,1391	0/0:18,0:18:48.16:0,48,1425	0/0:28,0:28:78.27:0,78,2291	1/1:9,10:19:27.09:532,27,0	0/0:24,0:24:69.24:0,69,2046	0/0:26,0:26:69.24:0,69,2022	0/0:12,0:12:36.12:0,36,1065	1/1:3,21:24:60.21:1183,60,0	0/0:23,0:23:63.22:0,63,1831	0/0:21,0:21:60.21:0,60,1727	0/0:11,0:11:30.10:0,30,892	0/0:12,0:12:33.11:0,33,976	0/0:31,0:31:84.26:0,84,2422	0/0:26,0:26:75.26:0,75,2221	1/1:3,11:14:33.10:602,33,0	1/1:1,6:7:15.05:296,15,0	1/1:4,15:20:36.12:697,36,0	0/0:18,0:18:51.18:0,51,1515	0/0:12,0:12:36.12:0,36,1066	0/0:21,0:21:60.21:0,60,1770	0/0:23,0:23:63.22:0,63,1827	0/0:19,0:19:54.19:0,54,1533	1/1:2,13:15:33.11:651,33,0	0/0:16,0:16:45.15:0,45,1280
chr10	107517939	.	GAAGAAACA	G	4534.10	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=11.436;DP=485;FS=7.644;HRun=0;HaplotypeScore=122.5143;InbreedingCoeff=0.8429;MQ=58.19;MQ0=5;MQRankSum=-8.368;QD=36.57;ReadPosRankSum=-0.565;VQSLOD=3.9621;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:72.25:0,72,2595	0/0:7,0:7:15.05:0,15,519	0/0:19,0:8:0.05:0,0,279	0/1:14,0:9:28.08:28,0,292	0/0:19,0:19:48.16:0,48,1756	0/0:21,0:21:42.13:0,42,1392	0/0:20,0:20:39.13:0,39,1506	1/1:17,17:34:51.16:1081,51,0	0/0:15,0:15:36.12:0,36,1329	0/0:29,0:29:81.28:0,81,3190	0/0:11,0:11:30.10:0,30,996	1/1:1,10:11:27.09:691,27,0	0/0:12,0:12:27.09:0,27,1052	0/0:8,0:8:21.07:0,21,757	0/0:13,0:13:36.11:0,36,1361	0/0:12,0:12:30.10:0,30,1098	0/0:15,0:15:33.11:0,33,1326	0/0:18,0:18:39.13:0,39,1416	1/1:8,9:14:24.08:593,24,0	1/1:2,13:15:33.11:748,33,0	1/1:6,6:12:12.04:310,12,0	0/0:9,0:9:24.08:0,24,920	0/0:16,0:16:42.14:0,42,1664	0/0:30,0:31:75.26:0,75,2745	0/0:16,0:16:42.14:0,42,1399	0/0:20,0:20:51.18:0,51,1998	1/1:4,17:21:42.14:1084,42,0	0/0:19,0:19:45.15:0,45,1882
chr10	107518183	.	TA	T	1541.15	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=8.466;DP=564;FS=0.454;HRun=12;HaplotypeScore=59.0693;InbreedingCoeff=0.9095;MQ=68.11;MQ0=2;MQRankSum=-0.926;QD=11.86;ReadPosRankSum=-0.511;VQSLOD=3.0848;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:46:99:0,114,1119	0/0:9,0:9:14.97:0,15,130	0/0:12,1:10:5.95:0,6,49	0/1:12,0:8:0.08:0,0,0	0/0:29,2:31:37.68:0,38,734	0/0:21,1:22:33.88:0,34,525	0/0:16,0:15:45.07:0,45,445	1/1:10,19:29:53.77:416,54,0	0/0:15,0:16:44.92:0,45,441	0/0:28,0:28:57.10:0,57,571	0/0:20,0:20:54.08:0,54,536	1/1:2,9:12:22.95:168,23,0	0/0:15,0:15:42.07:0,42,420	0/0:22,0:22:36.49:0,36,494	0/0:18,0:18:30.05:0,30,299	0/0:10,0:10:24.05:0,24,244	0/0:37,0:37:93.12:0,93,915	0/0:21,0:21:45.06:0,45,443	1/1:10,15:25:32.97:312,33,0	1/1:3,17:20:47.73:365,48,0	1/1:3,8:11:20.71:162,21,0	0/0:3,0:3:3.01:0,3,30	0/0:13,0:14:23.64:0,24,222	0/0:16,0:16:39.08:0,39,396	0/0:20,0:20:48.08:0,48,478	0/0:26,0:26:61.20:0,61,596	1/1:5,15:20:38.83:302,39,0	0/0:30,0:30:76.04:0,76,763
chr10	107520588	.	T	TTCTAGACATA	11967.92	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-6.784;DP=625;FS=3.986;HRun=0;HaplotypeScore=184.5139;InbreedingCoeff=0.9971;MQ=89.67;MQ0=0;MQRankSum=-12.667;QD=69.58;ReadPosRankSum=-3.503;VQSLOD=4.1752;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,99,2959	1/1:3,7:11:18.06:890,18,0	0/0:26,0:26:36.11:0,36,953	0/0:31,0:30:66.15:0,66,1650	0/0:20,0:20:51.08:0,51,1431	0/0:20,0:20:45.15:0,45,1388	0/0:27,0:27:51.16:0,51,1443	1/1:42,4:49:69.21:2857,69,0	0/0:17,0:17:45.15:0,45,1402	0/0:21,0:21:54.17:0,54,1535	0/0:14,0:14:30.09:0,30,866	1/1:9,10:19:24.08:1223,24,0	0/0:17,0:17:33.10:0,33,961	0/0:16,0:16:33.11:0,33,1028	0/0:28,0:28:63.19:0,63,1827	0/0:21,0:21:57.19:0,57,1631	0/0:21,0:21:48.15:0,48,1366	0/0:22,0:22:60.17:0,60,1694	1/1:23,2:24:45.15:1815,45,0	1/1:14,9:24:32.79:1680,33,0	1/1:10,7:17:21.07:1058,21,0	0/0:19,0:19:39.12:0,39,1137	0/0:21,0:21:60.21:0,60,1855	0/0:22,0:22:57.17:0,57,1592	0/0:15,0:15:39.13:0,39,1212	0/0:22,0:22:54.19:0,54,1665	1/1:7,13:26:48.11:2444,48,0	0/0:13,0:13:36.12:0,36,1120
chr10	107520832	.	AG	A	1241.43	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.136;DP=614;FS=12.431;HRun=2;HaplotypeScore=59.4215;InbreedingCoeff=0.9997;MQ=73.79;MQ0=0;MQRankSum=-0.284;QD=35.47;ReadPosRankSum=2.127;VQSLOD=3.2694;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1572	1/1:0,13:13:39.13:506,39,0	0/0:15,0:15:38.82:0,39,527	0/0:17,0:17:39.02:0,39,531	0/0:24,0:24:63.21:0,63,944	0/0:16,0:16:45.15:0,45,672	0/0:35,0:35:99:0,105,1512	0/0:36,0:36:99:0,108,1601	0/0:20,0:20:60.20:0,60,899	0/0:24,0:24:69.23:0,69,1034	0/0:15,0:15:45.15:0,45,675	1/1:0,22:22:66.21:857,66,0	0/0:16,0:16:48.16:0,48,719	0/0:19,0:19:57.19:0,57,854	0/0:19,0:19:54.18:0,54,809	0/0:16,0:16:48.14:0,48,682	0/0:20,0:19:60.20:0,60,890	0/0:20,0:20:60.20:0,60,899	0/0:20,0:20:54.17:0,54,788	0/0:25,0:25:72.24:0,72,1076	0/0:28,0:28:84.27:0,84,1236	0/0:20,0:20:60.20:0,60,893	0/0:23,0:23:69.23:0,69,1034	0/0:36,0:36:99:0,108,1599	0/0:18,0:18:54.18:0,54,808	0/0:27,0:27:81.27:0,81,1196	0/0:22,0:22:66.22:0,66,988	0/0:11,0:11:33.11:0,33,487
chr10	107521111	.	ATGATGGC	A	394.23	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.824;DP=702;FS=1.634;HRun=0;HaplotypeScore=153.6556;InbreedingCoeff=0.9825;MQ=59.66;MQ0=5;MQRankSum=-4.072;QD=43.80;ReadPosRankSum=1.951;VQSLOD=3.8211;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,160,6218	1/1:3,6:9:18.06:485,18,0	0/0:20,0:15:45.13:0,45,1415	0/0:20,0:7:18.06:0,18,693	0/0:32,0:32:96.29:0,96,3587	0/0:10,0:10:30.10:0,30,1205	0/0:41,0:41:99:0,123,4758	0/0:22,0:21:57.20:0,57,2296	0/0:18,0:18:54.17:0,54,2101	0/0:37,0:36:99:0,102,3999	0/0:9,0:9:27.09:0,27,1029	0/0:29,0:29:87.27:0,87,3271	0/0:17,0:17:51.18:0,51,2080	0/0:24,0:24:69.22:0,69,2605	0/0:26,0:26:75.26:0,75,3073	0/0:15,0:15:45.15:0,45,1845	0/0:33,0:33:96.33:0,96,3788	0/0:28,0:28:81.28:0,81,3252	0/0:18,0:17:45.15:0,45,1712	0/0:24,0:24:72.22:0,72,2755	0/0:48,0:48:99:0,144,5712	0/0:20,0:20:60.21:0,60,2415	0/0:27,0:27:81.28:0,81,3307	0/0:42,0:42:99:0,126,5003	0/0:16,0:16:48.15:0,48,1866	0/0:26,0:26:72.24:0,72,2811	0/0:20,0:21:63.22:0,63,2450	0/0:16,0:16:48.16:0,48,1946
chr10	107521806	.	A	AC	5163.43	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.261;DP=590;FS=0.359;HRun=0;HaplotypeScore=75.1576;InbreedingCoeff=0.9872;MQ=79.76;MQ0=0;MQRankSum=-2.156;QD=32.27;ReadPosRankSum=-0.249;VQSLOD=4.1731;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1474	0/0:4,0:4:12.04:0,12,167	0/0:16,0:16:15.80:0,16,496	0/0:19,0:18:53.84:0,54,577	0/0:12,0:12:36.11:0,36,479	0/0:15,0:15:45.15:0,45,628	0/0:23,0:23:69.21:0,69,944	1/1:3,23:26:69.14:883,69,0	0/0:28,0:28:84.27:0,84,1157	0/0:16,0:16:45.15:0,45,629	0/0:12,0:12:36.12:0,36,500	1/1:1,28:29:33.29:905,33,0	0/0:22,0:22:66.21:0,66,897	0/0:21,0:21:63.21:0,63,881	0/0:23,0:23:69.23:0,69,961	0/0:16,0:16:45.15:0,45,630	0/0:41,0:41:99:0,123,1703	0/0:23,0:23:66.20:0,66,894	1/1:3,16:19:50.63:679,51,0	1/1:1,10:11:22.96:283,23,0	1/1:3,47:50:99:1518,115,0	0/0:26,0:26:72.24:0,72,1000	0/0:11,0:11:33.10:0,33,446	0/0:27,0:27:75.23:0,75,1022	0/0:11,0:11:33.10:0,33,441	0/0:22,0:22:66.22:0,66,917	1/1:2,23:25:66.22:896,66,0	0/0:5,0:5:15.05:0,15,205
chr10	107521950	.	CAGGGT	C	5882.86	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.433;DP=570;FS=1.364;HRun=0;HaplotypeScore=116.7585;InbreedingCoeff=0.9955;MQ=87.78;MQ0=0;MQRankSum=-13.114;QD=57.68;ReadPosRankSum=-0.942;VQSLOD=5.1514;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,4190	0/0:8,0:8:21.05:0,21,572	0/0:25,0:25:75.26:0,75,2391	0/0:21,0:21:53.33:0,53,1670	0/0:29,0:29:87.23:0,87,2693	0/0:21,0:21:63.22:0,63,2011	0/0:18,0:18:54.19:0,54,1667	1/1:0,14:14:41.67:814,42,0	0/0:21,0:21:63.20:0,63,1963	0/0:12,0:12:36.11:0,36,1003	0/0:8,0:8:24.05:0,24,631	1/1:0,31:31:81.28:1860,81,0	0/0:16,0:16:48.15:0,48,1474	0/0:23,0:23:69.24:0,69,2167	0/0:30,0:30:90.31:0,90,2819	0/0:18,0:18:54.19:0,54,1768	0/0:40,0:40:99:0,120,3697	0/0:27,0:27:75.26:0,75,2413	1/1:0,15:15:42:850,42,0	1/1:0,5:5:15.05:339,15,0	1/1:0,21:21:44.88:981,45,0	0/0:15,0:15:45.15:0,45,1469	0/0:12,0:12:36.12:0,36,1102	0/0:24,0:24:72.23:0,72,2259	0/0:15,0:15:45.14:0,45,1395	0/0:23,0:23:69.23:0,69,2158	1/1:0,15:16:45.15:1038,45,0	0/0:18,0:18:51.18:0,51,1645
chr10	107522007	.	CCCGAGTGT	C	6424.18	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.479;DP=592;FS=13.351;HRun=0;HaplotypeScore=165.8647;InbreedingCoeff=0.9991;MQ=86.16;MQ0=0;MQRankSum=-12.174;QD=80.30;ReadPosRankSum=-3.400;VQSLOD=3.4578;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,6042	0/0:11,0:11:33.11:0,33,1526	0/0:24,0:24:72.25:0,72,3027	0/0:28,0:28:78.04:0,78,3182	0/0:20,0:20:60.20:0,60,2639	0/0:19,0:19:57.20:0,57,2570	0/0:25,0:25:75.26:0,75,3376	1/1:0,23:23:66.21:1808,66,0	0/0:19,0:19:57.20:0,57,2516	0/0:22,0:22:63.21:0,63,2632	0/0:12,0:12:36.12:0,36,1543	0/0:35,0:35:93.28:0,93,4048	0/0:22,0:22:66.23:0,66,2931	0/0:20,0:20:60.21:0,60,2595	0/0:26,0:26:78.26:0,78,3471	0/0:12,0:12:36.12:0,36,1580	0/0:38,0:38:99:0,111,4845	0/0:25,0:25:75.21:0,75,3243	1/1:0,9:9:27.09:816,27,0	1/1:0,11:11:30.10:900,30,0	1/1:0,15:15:36.12:994,36,0	0/0:21,0:21:63.21:0,63,2474	0/0:10,0:10:30.06:0,30,1219	0/0:31,0:31:93.31:0,93,4087	0/0:18,0:18:54.19:0,54,2365	0/0:20,0:20:60.21:0,60,2571	1/1:0,22:22:63.22:1906,63,0	0/0:9,0:9:27.06:0,27,939
chr10	107522303	.	AAAAAAAAC	A	1435.05	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.483;DP=521;FS=0.000;HRun=0;HaplotypeScore=129.2145;InbreedingCoeff=0.9211;MQ=62.29;MQ0=8;MQRankSum=-3.742;QD=22.78;ReadPosRankSum=1.643;VQSLOD=3.1446;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:74.04:0,74,2122	0/0:6,0:6:18.05:0,18,370	0/0:45,0:16:23.73:0,24,477	0/0:32,0:16:29.84:0,30,460	0/0:24,0:24:67.96:0,68,1645	0/0:15,0:15:42.14:0,42,1127	0/0:21,0:21:60.17:0,60,1869	1/1:9,4:13:35.92:489,36,0	0/0:16,0:16:45.12:0,45,1398	0/0:22,0:21:63.19:0,63,1660	0/0:18,0:18:54.15:0,54,1567	0/0:18,0:18:22.57:0,23,1264	0/0:10,0:10:29.96:0,30,792	0/0:15,0:15:45.14:0,45,1442	0/0:15,0:15:42.14:0,42,1232	0/0:12,0:12:36.12:0,36,1200	0/0:31,0:31:92.80:0,93,3135	0/0:22,0:22:65.65:0,66,1934	1/1:5,2:7:10.24:201,10,0	1/1:3,13:16:26.31:504,26,0	1/1:0,9:9:5.74:134,6,0	0/0:11,0:11:33.04:0,33,913	0/0:15,0:15:39.13:0,39,1362	0/0:26,0:26:75.22:0,75,2264	0/0:24,0:24:72.21:0,72,1965	0/0:25,0:25:74.45:0,74,1888	1/1:17,1:18:3.94:265,4,0	0/0:10,0:10:24.08:0,24,814
chr10	107526987	.	GA	G	2863.18	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.884;DP=521;FS=0.865;HRun=6;HaplotypeScore=62.2955;InbreedingCoeff=0.9921;MQ=90.59;MQ0=0;MQRankSum=-1.195;QD=25.12;ReadPosRankSum=-0.007;VQSLOD=3.3620;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.16:0,69,837	1/1:1,9:10:27.07:290,27,0	0/0:30,0:28:45.44:0,45,615	0/0:28,0:27:10.85:0,11,428	0/0:15,0:15:42.12:0,42,530	0/0:15,0:15:39.13:0,39,506	0/0:13,0:13:30.08:0,30,375	1/1:2,26:28:78.09:791,78,0	0/0:16,0:16:45.14:0,45,571	0/0:19,0:19:51.16:0,51,639	0/0:18,0:18:50.38:0,50,626	1/1:3,13:16:30.07:321,30,0	0/0:12,0:12:33.10:0,33,415	0/0:21,0:21:60.14:0,60,741	0/0:24,0:24:69.18:0,69,864	0/0:19,0:19:57.16:0,57,714	0/0:21,0:21:57.15:0,57,709	0/0:21,0:21:63.18:0,63,789	1/1:1,16:17:47.72:502,48,0	1/1:0,10:10:27.07:290,27,0	1/1:1,18:19:42.10:451,42,0	0/0:14,0:14:39.11:0,39,493	0/0:14,0:14:39.11:0,39,478	0/0:23,0:23:66.14:0,66,797	0/0:16,0:16:45.14:0,45,571	0/0:22,0:22:66.21:0,66,843	1/1:0,14:14:39.10:418,39,0	0/0:23,0:23:69.15:0,69,860
chr10	107527087	.	T	TCTC	4608.13	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-5.709;DP=335;FS=47.804;HRun=0;HaplotypeScore=50.8905;InbreedingCoeff=0.9895;MQ=78.67;MQ0=0;MQRankSum=-5.285;QD=60.63;ReadPosRankSum=-1.748;VQSLOD=2.0135;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.12:0,39,636	1/1:3,7:10:27.09:578,27,0	0/0:9,0:8:24.08:0,24,398	0/0:13,0:13:31.08:0,31,502	0/0:14,0:14:42.12:0,42,683	0/0:11,0:11:24.08:0,24,409	0/0:14,0:14:42.14:0,42,715	1/1:1,22:25:72.23:1591,72,0	0/0:17,0:17:51.14:0,51,793	0/0:15,0:15:45.15:0,45,743	0/0:16,0:16:45.14:0,45,729	1/1:2,4:6:18.06:414,18,0	0/0:9,0:9:24.08:0,24,409	0/0:7,0:7:18.04:0,18,276	0/0:8,0:8:24.08:0,24,409	0/0:14,0:14:42.12:0,42,663	0/0:17,0:17:48.16:0,48,818	0/0:7,0:7:21.03:0,21,327	1/1:3,7:10:24.08:511,24,0	1/1:0,11:11:30.10:690,30,0	1/1:1,7:8:21.07:484,21,0	0/0:15,0:15:42.14:0,42,716	0/0:16,0:16:48.16:0,48,815	0/0:10,0:10:27.09:0,27,460	0/0:14,0:14:39.13:0,39,665	0/0:12,0:12:36.12:0,36,612	1/1:0,5:6:15.05:341,15,0	0/0:8,0:8:21.05:0,21,331
chr10	107529518	.	CGT	C	638.48	PASS	AB=0.917;AC=15;AF=0.268;AN=56;BaseQRankSum=5.453;DP=769;FS=5.253;HRun=0;HaplotypeScore=104.8181;InbreedingCoeff=-0.2081;MQ=59.92;MQ0=30;MQRankSum=1.298;QD=1.73;ReadPosRankSum=0.330;VQSLOD=1.0256;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,1:45:35.90:0,36,1071	0/0:10,0:10:3.01:0,3,35	0/0:46,0:19:2.84:0,3,14	0/0:47,0:11:11.78:0,12,98	0/1:16,2:18:55.82:56,0,249	0/1:28,2:32:78.61:79,0,525	0/0:22,3:25:0.75:0,1,431	0/0:39,0:38:23.25:0,23,165	0/0:27,0:27:45.14:0,45,637	1/1:14,9:23:13.51:220,14,0	0/0:19,0:18:5.03:0,5,489	0/0:21,0:19:14.69:0,15,133	0/0:17,0:18:12.93:0,13,334	0/1:23,0:24:2.47:2,0,553	0/1:24,3:27:1.09:1,0,404	0/1:21,3:23:26.25:26,0,481	0/1:26,3:29:99:121,0,542	0/1:25,3:28:31.36:31,0,540	0/0:19,0:17:14.87:0,15,115	0/0:27,0:25:8.73:0,9,62	0/0:42,0:35:16.14:0,16,103	0/1:41,2:42:43.95:44,0,681	0/1:15,1:17:27.23:27,0,202	0/1:31,3:34:99:140,0,568	0/1:19,4:23:3.72:4,0,325	0/1:24,0:24:25.52:26,0,399	0/0:16,0:14:14.82:0,15,120	0/1:19,0:19:9.44:9,0,275
chr10	107529963	.	ACTTCGGAC	A	5962.48	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.724;DP=711;FS=1.367;HRun=0;HaplotypeScore=181.0488;InbreedingCoeff=0.9970;MQ=86.72;MQ0=0;MQRankSum=-12.230;QD=38.97;ReadPosRankSum=-1.789;VQSLOD=4.4714;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,175,7082	1/1:0,8:8:18.06:474,18,0	0/0:31,0:31:75.17:0,75,2564	0/0:27,0:27:63.08:0,63,1830	0/0:17,0:17:45.15:0,45,1884	0/0:37,0:37:93.31:0,93,3859	0/0:23,0:23:69.24:0,69,2741	1/1:9,21:30:63.05:1334,63,0	0/0:23,0:23:60.21:0,60,2354	0/0:23,0:23:57.20:0,57,2208	0/0:22,0:22:57.20:0,57,2173	1/1:0,24:24:53.85:1307,54,0	0/0:22,0:22:63.22:0,63,2573	0/0:24,0:24:60.21:0,60,2578	0/0:28,0:28:81.28:0,81,3308	0/0:21,0:21:63.20:0,63,2485	0/0:23,0:23:57.18:0,57,2279	0/0:20,0:20:60.21:0,60,2503	1/1:6,13:19:39.06:870,39,0	1/1:0,11:11:18.06:450,18,0	1/1:17,21:38:35.78:540,36,0	0/0:22,0:22:51.18:0,51,2159	0/0:17,0:17:48.16:0,48,2049	0/0:32,0:32:84.29:0,84,3435	0/0:22,0:22:63.19:0,63,2339	0/0:30,0:30:87.30:0,87,3359	1/1:3,20:23:38.71:988,39,0	0/0:31,0:31:87.27:0,87,3423
chr10	107530379	.	AT	A	4147.69	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.788;DP=648;FS=16.465;HRun=6;HaplotypeScore=63.7583;InbreedingCoeff=0.9992;MQ=82.71;MQ0=0;MQRankSum=-1.130;QD=29.84;ReadPosRankSum=-1.503;VQSLOD=1.9363;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,138,1787	0/0:10,0:10:27.09:0,27,355	0/0:15,0:15:35.90:0,36,407	0/0:22,0:22:51.34:0,51,642	0/0:25,0:25:69.22:0,69,907	0/0:17,0:17:48.16:0,48,631	0/0:29,0:29:75.24:0,75,986	1/1:2,28:30:84.13:860,84,0	0/0:25,0:25:72.22:0,72,924	0/0:25,0:25:69.21:0,69,886	0/0:18,0:18:54.16:0,54,696	1/1:0,22:22:63.16:677,63,0	0/0:21,0:21:60.20:0,60,789	0/0:28,0:28:84.25:0,84,1076	0/0:11,0:11:33.11:0,33,434	0/0:17,0:17:51.14:0,51,641	0/0:46,0:46:99:0,132,1719	0/0:29,0:29:78.21:0,78,1005	1/1:1,10:11:30.08:322,30,0	1/1:0,9:9:27.07:290,27,0	1/1:1,44:45:99:1289,120,0	0/0:21,0:21:60.20:0,60,789	0/0:13,0:13:36.12:0,36,474	0/0:30,0:31:90.13:0,90,1131	0/0:19,0:19:57.17:0,57,734	0/0:29,0:29:81.22:0,81,1052	1/1:0,22:22:66.17:709,66,0	0/0:9,0:9:27.09:0,27,355
chr10	107532424	.	G	GA	120.85	PASS	AB=0.929;AC=3;AF=0.054;AN=56;BaseQRankSum=-2.400;DP=450;FS=8.748;HRun=10;HaplotypeScore=47.3411;InbreedingCoeff=0.5956;MQ=58.31;MQ0=6;MQRankSum=1.423;QD=4.32;ReadPosRankSum=-0.505;VQSLOD=-0.1716;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:59.91:0,60,489	0/0:4,0:4:8.98:0,9,74	0/0:5,0:4:11.98:0,12,97	0/0:5,0:4:11.97:0,12,96	0/0:18,0:21:17.76:0,18,319	0/0:13,1:14:9.97:0,10,288	0/0:21,0:21:59.90:0,60,490	0/0:29,0:29:73.73:0,74,596	0/0:16,0:16:41.92:0,42,341	0/0:21,0:21:59.89:0,60,486	0/0:15,0:17:39.99:0,40,303	1/1:5,10:15:21.01:212,21,0	0/0:13,0:13:35.93:0,36,290	0/0:17,0:17:41.92:0,42,344	0/0:12,0:12:29.93:0,30,244	0/0:10,0:10:29.96:0,30,246	0/0:28,0:28:76.07:0,76,618	0/0:21,0:22:49.86:0,50,391	0/0:17,0:16:35.94:0,36,295	0/0:13,0:13:31.93:0,32,245	0/0:25,0:24:50.91:0,51,419	0/1:12,1:13:8.06:8,0,150	0/0:11,0:10:23.96:0,24,197	0/0:18,0:18:47.44:0,47,393	0/0:16,0:16:35.95:0,36,296	0/0:14,0:15:43.99:0,44,351	0/0:16,0:16:44.85:0,45,360	0/0:11,0:9:26:0,26,202
chr10	107534175	.	A	AC	1349.21	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-5.073;DP=646;FS=4.402;HRun=9;HaplotypeScore=76.5799;InbreedingCoeff=0.8932;MQ=81.83;MQ0=1;MQRankSum=-1.123;QD=11.34;ReadPosRankSum=-2.441;VQSLOD=2.6608;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:68.90:0,69,590	0/0:1,0:13:24.44:0,24,72	0/0:32,0:32:66.49:0,66,541	0/0:18,0:17:29.33:0,29,224	0/0:29,0:29:77.95:0,78,672	0/0:22,0:22:59.97:0,60,516	0/0:15,0:15:38.99:0,39,339	1/1:15,12:28:6.49:226,6,0	0/0:18,0:18:47.99:0,48,417	0/0:33,0:33:83.97:0,84,728	0/0:18,0:18:47.99:0,48,416	0/0:4,0:23:38.70:0,39,114	0/0:32,0:32:71.96:0,72,624	0/0:18,0:18:38.96:0,39,337	0/0:36,0:35:99:0,105,908	0/0:31,1:32:59.79:0,60,748	0/0:29,0:29:80.96:0,81,699	0/0:16,0:16:8.81:0,9,305	1/1:9,6:15:20.99:208,21,0	1/1:10,15:25:3.98:259,4,0	1/1:5,22:26:19.07:439,19,0	0/0:11,0:11:23.98:0,24,208	0/0:13,0:13:35.98:0,36,311	0/0:25,0:25:62.96:0,63,547	0/0:24,0:24:71.99:0,72,624	0/0:24,0:24:62.96:0,63,542	1/1:2,21:24:35.73:379,36,0	0/0:13,0:14:4.67:0,5,212
chr10	107534752	.	AC	A	494.14	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.382;DP=421;FS=3.218;HRun=6;HaplotypeScore=42.6686;InbreedingCoeff=0.9563;MQ=64.24;MQ0=1;MQRankSum=-0.734;QD=24.71;ReadPosRankSum=0.001;VQSLOD=2.9158;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.18:0,57,743	1/1:0,5:5:15.04:161,15,0	0/0:18,0:16:38.95:0,39,472	0/0:9,0:3:9.03:0,9,118	0/0:21,0:21:63.19:0,63,813	0/0:18,0:18:51.16:0,51,656	0/0:13,0:13:39.13:0,39,512	0/0:28,0:28:75.24:0,75,986	0/0:11,0:11:30.08:0,30,380	0/0:14,0:14:42.13:0,42,539	0/0:23,0:23:63.18:0,63,799	1/1:1,14:15:42.11:451,42,0	0/0:8,0:8:21.07:0,21,276	0/0:10,0:10:27.09:0,27,355	0/0:18,0:18:54.18:0,54,710	0/0:13,0:13:39.13:0,39,513	0/0:23,0:23:69.20:0,69,879	0/0:16,0:16:40.37:0,40,570	0/0:19,0:18:54.15:0,54,682	0/0:20,0:20:48.63:0,49,632	0/0:8,0:8:24.08:0,24,316	0/0:11,0:11:33.11:0,33,433	0/0:10,0:10:30.10:0,30,394	0/0:16,0:16:45.15:0,45,592	0/0:17,0:17:51.17:0,51,671	0/0:16,0:16:45.14:0,45,578	0/0:13,0:13:39.13:0,39,512	0/0:7,0:7:21.07:0,21,276
chr10	107535293	.	C	CCCCCA	589.48	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=3.230;DP=388;FS=23.208;HRun=0;HaplotypeScore=83.5666;InbreedingCoeff=0.5793;MQ=83.08;MQ0=0;MQRankSum=-4.507;QD=13.10;ReadPosRankSum=-1.016;VQSLOD=0.9624;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.12:0,69,1213	0/0:7,0:7:18:0,18,209	0/0:20,0:19:35.08:0,35,545	0/0:15,0:15:27.62:0,28,481	0/0:16,0:16:42.13:0,42,787	0/0:8,0:8:24.08:0,24,456	0/0:10,0:10:27.09:0,27,518	0/0:13,0:13:8.05:0,8,83	0/0:13,0:13:39.12:0,39,749	0/0:16,0:16:39.13:0,39,773	0/0:14,0:14:36.11:0,36,628	1/1:10,5:18:23.28:630,23,0	0/0:14,0:14:42.11:0,42,754	0/0:19,0:19:54.17:0,54,977	0/0:25,0:25:72.25:0,72,1422	0/0:8,0:8:21.07:0,21,422	0/0:26,0:26:74.59:0,75,1301	0/0:16,0:16:48.13:0,48,905	0/0:4,0:4:2.94:0,3,18	1/1:8,0:8:0.92:2,1,0	0/1:7,0:7:19.31:35,0,19	0/0:17,0:17:51.17:0,51,971	0/0:13,0:13:33.10:0,33,615	0/0:15,0:15:36.08:0,36,590	0/0:11,0:11:33.10:0,33,594	0/0:11,0:11:32.90:0,33,577	1/1:12,0:12:0.26:39,0,0	0/0:8,0:8:20.10:0,20,352
chr10	107535299	.	C	CA	156.02	PASS	AB=0.706;AC=3;AF=0.054;AN=56;BaseQRankSum=6.275;DP=386;FS=3.448;HRun=1;HaplotypeScore=49.7732;InbreedingCoeff=0.5396;MQ=80.16;MQ0=0;MQRankSum=-0.640;QD=8.67;ReadPosRankSum=-1.151;VQSLOD=0.5997;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.03:0,69,799	1/1:0,6:6:18.01:227,18,0	0/0:16,0:16:20.96:0,21,324	0/0:12,0:13:30.49:0,30,310	0/0:15,0:15:40.43:0,40,500	0/0:9,0:9:24.06:0,24,284	0/0:11,0:11:33.07:0,33,384	0/0:10,0:13:12.01:0,12,106	0/0:14,0:14:42.10:0,42,511	0/0:17,0:17:42.12:0,42,514	0/0:14,0:14:38.28:0,38,401	0/1:6,0:12:19.96:32,0,20	0/0:14,0:14:27.30:0,27,448	0/0:19,0:19:53.98:0,54,601	0/0:27,0:27:75.21:0,75,926	0/0:8,0:8:24.07:0,24,297	0/0:27,0:27:68.79:0,69,815	0/0:18,0:18:45.04:0,45,558	0/0:3,0:3:5.93:0,6,40	0/0:8,0:8:5.91:0,6,39	0/0:10,0:11:20.88:0,21,158	0/0:18,0:18:51.05:0,51,607	0/0:11,0:11:30.08:0,30,372	0/0:11,0:11:32.92:0,33,354	0/0:13,0:13:35.97:0,36,402	0/0:14,0:14:39.09:0,39,450	0/0:14,0:14:27.14:0,27,181	0/0:7,0:7:20.90:0,21,228
chr10	107537774	.	C	CT	422.33	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.496;DP=737;FS=4.569;HRun=8;HaplotypeScore=70.0831;InbreedingCoeff=0.9618;MQ=67.24;MQ0=0;MQRankSum=-1.175;QD=17.60;ReadPosRankSum=0.685;VQSLOD=3.6804;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,132,1186	0/0:7,0:7:17.99:0,18,157	0/0:18,0:15:30.01:0,30,273	0/0:18,0:15:22.12:0,22,300	0/0:18,0:18:48.01:0,48,434	0/0:16,0:16:39.02:0,39,357	0/0:38,0:38:99:0,102,917	0/0:37,0:37:80.98:0,81,720	0/0:26,0:26:62.97:0,63,567	0/0:26,0:26:66:0,66,599	0/0:17,0:17:36.01:0,36,329	1/1:6,18:24:43.86:517,44,0	0/0:32,0:32:87.02:0,87,788	0/0:21,1:22:16.39:0,16,405	0/0:28,1:29:37.34:0,37,576	0/0:25,0:24:66.02:0,66,600	0/0:36,0:36:99:0,99,901	0/0:27,0:27:72:0,72,651	0/0:21,0:21:47.68:0,48,421	0/0:24,0:24:59.96:0,60,540	0/0:25,0:25:62.98:0,63,563	0/0:26,0:26:57.01:0,57,521	0/0:19,0:19:45.01:0,45,407	0/0:35,0:37:99:0,100,881	0/0:21,0:21:60.03:0,60,549	0/0:42,0:42:99:0,108,978	0/0:38,0:38:99:0,105,954	0/0:11,0:11:15.01:0,15,137
chr10	107538208	.	G	GA	145.21	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.198;DP=634;FS=5.546;HRun=10;HaplotypeScore=60.8082;InbreedingCoeff=0.9884;MQ=74.47;MQ0=0;MQRankSum=-0.008;QD=14.52;ReadPosRankSum=0.735;VQSLOD=3.7591;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:95.83:0,96,784	1/1:1,8:10:23.93:238,24,0	0/0:15,0:14:29.78:0,30,244	0/0:20,0:19:23.87:0,24,197	0/0:17,0:17:35.93:0,36,295	0/0:22,0:23:67.95:0,68,547	0/0:27,2:29:42.88:0,43,556	0/0:29,0:29:46.98:0,47,539	0/0:18,0:18:41.94:0,42,345	0/0:32,0:32:92.89:0,93,763	0/0:17,1:18:44.94:0,45,369	0/0:27,0:27:68.87:0,69,557	0/0:18,0:18:47.94:0,48,394	0/0:18,0:18:44.92:0,45,367	0/0:27,1:28:48.91:0,49,608	0/0:16,0:16:38.94:0,39,320	0/0:26,0:26:68.90:0,69,566	0/0:16,1:17:18.97:0,19,362	0/0:15,0:15:38.88:0,39,313	0/0:33,0:33:95.88:0,96,788	0/0:21,0:21:62.93:0,63,517	0/0:32,1:33:54.89:0,55,655	0/0:26,0:26:47.68:0,48,536	0/0:18,0:18:50.93:0,51,416	0/0:24,0:24:65.90:0,66,541	0/0:22,0:22:62.93:0,63,517	0/0:27,0:27:65.91:0,66,542	0/0:16,0:16:41.92:0,42,345
chr10	107540718	.	A	AC	6879.18	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-16.205;DP=801;FS=3.201;HRun=2;HaplotypeScore=75.9890;InbreedingCoeff=1.0000;MQ=89.84;MQ0=0;MQRankSum=-5.294;QD=37.59;ReadPosRankSum=-0.435;VQSLOD=5.2233;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,153,1882	1/1:1,18:19:51.13:711,51,0	0/0:33,0:33:90.23:0,90,1066	0/0:28,0:28:72.20:0,72,868	0/0:27,0:27:78.25:0,78,967	0/0:18,0:18:54.17:0,54,669	0/0:37,0:37:99:0,99,1226	1/1:2,29:31:84.24:1154,84,0	0/0:25,0:25:72.23:0,72,892	0/0:35,0:35:96.29:0,96,1178	0/0:20,0:20:60.17:0,60,717	0/0:32,0:32:96.30:0,96,1190	0/0:17,0:17:48.14:0,48,584	0/0:22,0:22:60.18:0,60,731	0/0:28,0:28:78.24:0,78,967	0/0:33,0:33:96.29:0,96,1177	0/0:33,0:33:99:0,99,1198	0/0:23,0:23:69.22:0,69,854	1/1:1,21:22:63.18:869,63,0	1/1:0,31:31:90.30:1294,90,0	1/1:0,50:50:99:1901,132,0	0/0:33,0:33:96.29:0,96,1178	0/0:25,0:25:72.21:0,72,868	0/0:28,0:28:81.20:0,81,974	0/0:18,0:18:54.17:0,54,668	0/0:30,0:30:90.28:0,90,1115	1/1:3,27:30:66.22:950,66,0	0/0:20,0:20:60.18:0,60,731
chr10	107544524	.	A	AT	4353.24	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=-11.212;DP=577;FS=4.036;HRun=5;HaplotypeScore=56.7774;InbreedingCoeff=0.8271;MQ=67.18;MQ0=1;MQRankSum=0.425;QD=28.27;ReadPosRankSum=-2.084;VQSLOD=4.1805;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,111,1192	1/1:2,10:11:30.10:395,30,0	0/1:12,0:12:21.47:21,0,142	0/1:8,0:7:6.08:6,0,78	0/0:29,0:29:81.20:0,81,871	0/0:25,0:25:66.16:0,66,709	0/0:20,0:20:60.13:0,60,635	1/1:5,36:41:99:1365,105,0	0/0:12,0:12:36.09:0,36,387	0/0:27,0:27:72.15:0,72,757	0/0:15,0:15:39.10:0,39,419	0/0:17,0:17:51.11:0,51,540	0/0:16,0:16:48.08:0,48,497	0/0:15,0:15:42.11:0,42,451	0/0:20,0:20:54.12:0,54,570	0/0:20,0:20:57.13:0,57,606	0/0:33,0:32:84.21:0,84,903	0/0:18,0:18:48.12:0,48,516	1/1:4,23:27:69.20:879,69,0	1/1:2,16:19:45.14:582,45,0	1/1:1,13:14:33.11:434,33,0	0/0:18,0:18:48.12:0,48,516	0/0:19,0:19:57.14:0,57,612	0/0:16,0:16:45.11:0,45,484	0/0:31,0:31:84.20:0,84,895	0/0:21,0:21:63.14:0,63,669	1/1:2,19:21:51.17:671,51,0	0/0:10,0:10:30.08:0,30,322
chr10	107550792	.	CTG	C	5603.87	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.297;DP=730;FS=1.579;HRun=0;HaplotypeScore=90.0018;InbreedingCoeff=0.9999;MQ=78.93;MQ0=4;MQRankSum=-0.369;QD=38.92;ReadPosRankSum=-1.364;VQSLOD=6.3800;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,2319	0/0:12,0:12:36.12:0,36,674	0/0:21,0:22:51.62:0,52,787	0/0:16,0:16:38.72:0,39,585	0/0:23,0:23:60.21:0,60,1123	0/0:13,0:13:39.13:0,39,730	0/0:50,0:50:99:0,148,2742	1/1:0,33:33:96.30:1367,96,0	0/0:32,0:32:96.33:0,96,1797	0/0:33,0:33:96.33:0,96,1786	0/0:14,0:14:42.14:0,42,780	0/0:31,0:31:93.32:0,93,1741	0/0:22,0:22:66.23:0,66,1222	0/0:23,0:23:66.23:0,66,1228	0/0:26,0:26:78.27:0,78,1452	0/0:27,0:27:78.25:0,78,1430	0/0:29,0:29:87.28:0,87,1588	0/0:25,0:25:75.23:0,75,1358	1/1:1,26:27:78.21:1102,78,0	1/1:0,26:25:66.22:972,66,0	1/1:0,27:27:75.25:1105,75,0	0/0:24,0:24:69.24:0,69,1271	0/0:25,0:25:75.25:0,75,1369	0/0:31,0:31:93.32:0,93,1741	0/0:26,0:26:69.23:0,69,1261	0/0:23,0:23:66.21:0,66,1205	1/1:0,31:28:72.24:1059,72,0	0/0:14,0:14:39.13:0,39,726
chr10	107551544	.	AAC	A	539.70	PASS	AB=0.906;AC=25;AF=0.463;AN=54;BaseQRankSum=6.412;DP=559;FS=0.593;HRun=0;HaplotypeScore=78.8055;InbreedingCoeff=-0.4766;MQ=65.27;MQ0=3;MQRankSum=-0.488;QD=1.20;ReadPosRankSum=-0.861;VQSLOD=1.3310;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,5:30:11.07:11,0,374	1/1:7,0:15:6.67:34,7,0	./.	0/0:28,0:16:0:0,0,0	0/1:17,0:18:20.57:21,0,244	0/1:21,2:24:65.39:65,0,516	0/1:12,2:14:21.49:21,0,103	0/1:18,6:25:0.87:120,0,1	0/1:9,2:11:21.47:21,0,125	0/1:16,1:17:15.47:15,0,167	0/0:15,0:15:15.35:0,15,266	1/1:9,0:15:11.36:56,11,0	0/1:11,2:14:15.47:15,0,171	0/0:20,0:20:13.01:0,13,308	0/1:15,1:16:21.49:21,0,124	0/1:14,1:15:24.01:24,0,83	0/1:28,1:33:51.94:52,0,460	0/1:25,3:29:58.32:58,0,490	0/1:13,0:13:13.67:14,0,88	0/1:14,0:14:1.34:1,0,125	0/1:43,5:47:46.62:47,0,949	0/1:18,3:21:12.44:12,0,252	0/0:21,0:21:10.36:0,10,301	0/1:19,1:20:36.89:37,0,520	0/1:6,2:8:24.48:24,0,82	0/1:16,0:16:2.73:3,0,209	0/1:18,4:22:9.45:9,0,272	0/1:12,0:12:2.68:3,0,90
chr10	107552615	.	C	CA	265.38	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.972;DP=648;FS=1.390;HRun=1;HaplotypeScore=57.5437;InbreedingCoeff=0.9964;MQ=52.72;MQ0=14;MQRankSum=-1.158;QD=18.96;ReadPosRankSum=0.019;VQSLOD=3.7244;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1328	1/1:1,13:10:24.08:359,24,0	0/0:25,0:13:35.70:0,36,438	0/0:22,0:11:33.10:0,33,414	0/0:32,0:32:96.12:0,96,1167	0/0:21,0:21:60.20:0,60,778	0/0:31,0:31:87.28:0,87,1128	0/0:21,0:19:57.17:0,57,726	0/0:22,0:22:57.14:0,57,720	0/0:24,0:24:69.22:0,69,885	0/0:17,0:17:45.15:0,45,583	0/0:21,0:21:42.09:0,42,525	0/0:16,0:16:45.13:0,45,569	0/0:24,0:24:60.10:0,60,738	0/0:18,0:18:30.08:0,30,375	0/0:15,0:14:36.03:0,36,428	0/0:34,0:32:87.28:0,87,1126	0/0:34,0:34:93.27:0,93,1174	0/0:18,0:12:33.10:0,33,414	0/0:22,0:22:63.20:0,63,817	0/0:36,0:36:99:0,105,1311	0/0:25,0:25:72.23:0,72,934	0/0:19,0:19:54.18:0,54,700	0/0:24,0:24:63.12:0,63,767	0/0:21,0:21:57.19:0,57,739	0/0:25,0:25:69.22:0,69,883	0/0:13,0:13:33.11:0,33,426	0/0:18,0:18:54.18:0,54,701
chr10	107552908	.	A	AG	105.11	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.054;DP=836;FS=0.000;HRun=1;HaplotypeScore=76.4870;InbreedingCoeff=0.7250;MQ=42.46;MQ0=169;MQRankSum=-0.313;QD=10.51;ReadPosRankSum=0.535;VQSLOD=1.2542;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:47:96.28:0,96,1298	1/1:0,10:6:12.04:191,12,0	0/0:29,0:2:6.02:0,6,84	0/0:23,0:1:3.01:0,3,33	0/0:22,0:22:45.10:0,45,607	0/0:27,0:18:45.06:0,45,585	0/0:41,0:25:60.20:0,60,828	0/0:22,0:6:18.06:0,18,251	0/0:40,0:39:99:0,105,1457	0/0:39,0:29:87.27:0,87,1169	0/0:18,0:16:39.13:0,39,537	0/0:33,0:26:60.19:0,60,821	0/0:18,0:14:33.11:0,33,461	0/0:37,0:32:66.19:0,66,920	0/0:32,0:26:66.22:0,66,913	0/0:27,0:26:69.22:0,69,964	0/0:38,0:32:69.16:0,69,908	0/0:33,0:29:57.02:0,57,775	0/0:29,0:18:51.09:0,51,670	0/0:17,0:17:45.15:0,45,626	0/0:66,0:47:99:0,108,1487	0/0:15,0:12:30.10:0,30,413	0/0:20,0:17:27.09:0,27,378	0/0:46,0:41:87.27:0,87,1210	0/0:23,0:23:60.03:0,60,816	0/0:35,0:34:99:0,102,1426	0/0:29,0:20:48.16:0,48,671	0/0:10,0:7:12.04:0,12,168
chr10	107553968	.	T	TG	135.81	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.706;DP=576;FS=2.853;HRun=6;HaplotypeScore=64.1665;InbreedingCoeff=0.9447;MQ=70.02;MQ0=1;MQRankSum=-1.069;QD=15.09;ReadPosRankSum=-0.387;VQSLOD=3.2807;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:81.15:0,81,811	1/1:2,7:9:18.06:226,18,0	0/0:18,0:14:36.05:0,36,354	0/0:22,0:22:24.74:0,25,480	0/0:14,0:14:30.05:0,30,298	0/0:22,0:22:54.12:0,54,550	0/0:31,0:31:53.78:0,54,850	0/0:17,0:17:39.08:0,39,398	0/0:16,0:16:36.08:0,36,367	0/0:22,0:22:60.13:0,60,609	0/0:6,0:6:15.03:0,15,153	0/0:25,0:25:54.11:0,54,551	0/0:19,0:18:48.06:0,48,468	0/0:17,0:17:42.09:0,42,426	0/0:23,0:23:66.15:0,66,673	0/0:17,0:17:51.12:0,51,520	0/0:25,0:25:69.15:0,69,702	0/0:28,0:28:81.14:0,81,813	0/0:20,0:20:54.12:0,54,551	0/0:18,0:18:42.09:0,42,428	0/0:51,0:51:99:0,126,1285	0/0:16,0:16:33.07:0,33,336	0/0:15,0:15:36.08:0,36,366	0/0:33,0:33:87.15:0,87,875	0/0:17,0:17:45.10:0,45,457	0/0:21,0:21:51.11:0,51,520	0/0:16,0:15:48.11:0,48,489	0/0:6,0:6:12.02:0,12,122
chr10	107554058	.	CCT	C	456.75	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=3.523;DP=576;FS=2.084;HRun=0;HaplotypeScore=91.1126;InbreedingCoeff=0.6845;MQ=62.88;MQ0=11;MQRankSum=-0.689;QD=15.75;ReadPosRankSum=0.114;VQSLOD=3.1584;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.21:0,84,1316	0/1:9,0:9:8.97:69,0,9	0/0:29,0:12:30.08:0,30,426	0/0:38,0:24:30.16:0,30,773	0/0:10,0:10:27.09:0,27,388	0/0:13,0:13:36.12:0,36,624	0/0:22,0:22:66.21:0,66,1137	0/0:17,0:17:43.70:0,44,793	0/0:20,0:20:57.13:0,57,991	0/0:24,0:24:69:0,69,1066	0/0:9,0:9:20.74:0,21,333	1/1:2,18:20:33.10:494,33,0	0/0:19,0:19:50.19:0,50,845	0/0:20,0:20:13.97:0,14,940	0/0:31,0:30:90.19:0,90,1509	0/0:20,0:20:54.12:0,54,940	0/0:19,0:19:46.80:0,47,843	0/0:14,0:14:42.14:0,42,763	0/0:17,0:17:51.10:0,51,719	0/0:13,0:13:36.09:0,36,513	0/0:53,0:51:99:0,135,2002	0/0:20,0:19:51.17:0,51,908	0/0:12,0:12:29.18:0,29,493	0/0:28,0:28:69.18:0,69,1199	0/0:23,0:22:57.12:0,57,928	0/0:20,0:19:46.09:0,46,710	0/0:15,0:15:31.49:0,31,476	0/0:11,0:11:29.29:0,29,482
chr10	107554059	.	CTT	C	412.94	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.265;DP=576;FS=1.491;HRun=2;HaplotypeScore=90.3548;InbreedingCoeff=0.9495;MQ=62.52;MQ0=14;MQRankSum=-0.545;QD=14.75;ReadPosRankSum=0.625;VQSLOD=0.9120;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:80.57:0,81,777	1/1:3,5:8:23.95:282,24,0	0/0:27,0:10:16.94:0,17,161	0/0:38,0:24:31.67:0,32,457	0/0:11,0:10:26.89:0,27,228	0/0:13,0:13:36:0,36,444	0/0:22,0:22:65.23:0,65,740	0/0:17,0:17:44.36:0,44,419	0/0:20,0:20:48.55:0,49,691	0/0:24,0:24:57.72:0,58,635	0/0:9,0:9:20.70:0,21,257	1/1:20,0:20:32.65:252,33,0	0/0:19,0:19:33.97:0,34,590	0/0:19,0:20:37.19:0,37,706	0/0:32,0:31:76.92:0,77,1045	0/0:20,0:20:43.44:0,43,651	0/0:20,0:20:24.89:0,25,581	0/0:15,0:15:44.91:0,45,575	0/0:16,0:16:45.44:0,45,358	0/0:13,0:13:34.34:0,34,254	0/0:53,0:50:99:0,131,1018	0/0:20,0:19:50.96:0,51,659	0/0:12,0:12:29.61:0,30,312	0/0:28,0:28:60.24:0,60,812	0/0:22,0:21:50.91:0,51,562	0/0:21,0:20:31.09:0,31,513	0/0:15,0:15:23.93:0,24,242	0/0:12,0:11:7.55:0,8,297
chr10	107554060	.	TTC	T	226.48	PASS	AB=0.923;AC=20;AF=0.385;AN=52;BaseQRankSum=6.159;DP=600;FS=3.023;HRun=0;HaplotypeScore=93.2547;InbreedingCoeff=-0.0016;MQ=61.60;MQ0=15;MQRankSum=-1.512;QD=0.64;ReadPosRankSum=1.031;VQSLOD=1.7379;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:24.02:0,24,273	1/1:8,0:8:11.94:90,12,0	./.	./.	0/0:10,0:10:3:0,3,26	0/0:15,0:15:18.02:0,18,196	0/0:22,0:22:18.04:0,18,247	1/1:16,0:16:0.47:1,0,0	0/1:20,2:22:5.77:6,0,307	0/1:22,1:24:27.15:27,0,143	0/0:8,0:9:9.03:0,9,116	0/1:23,0:23:26.33:26,0,40	0/1:18,3:21:5.83:6,0,291	0/0:21,0:20:19.94:0,20,347	0/1:32,0:32:26.42:26,0,433	0/1:19,1:20:5.77:6,0,311	0/1:19,2:22:42.20:42,0,323	0/0:15,0:15:21.07:0,21,310	1/1:13,0:16:10.85:49,11,0	0/1:8,0:13:0.25:9,0,0	0/1:52,0:50:16.25:16,0,23	0/0:21,0:20:24.06:0,24,325	0/0:12,0:12:3.83:0,4,83	0/1:27,4:32:4.93:5,0,408	0/0:22,0:21:12.04:0,12,179	0/1:15,1:24:24.54:25,0,283	1/1:11,0:15:5.68:28,6,0	0/1:13,0:12:17.70:18,0,117
chr10	107554266	.	TTCTCGCTCTCTCGCTC	T	558.09	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.640;DP=725;FS=4.174;HRun=0;HaplotypeScore=302.0968;InbreedingCoeff=0.5999;MQ=68.49;MQ0=2;MQRankSum=-3.605;QD=21.46;ReadPosRankSum=0.233;VQSLOD=2.0094;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:66.23:0,66,4382	0/0:6,0:6:3.01:0,3,169	0/0:20,0:16:9.50:0,9,192	0/0:36,0:23:18.40:0,18,299	0/0:14,0:14:30.09:0,30,1528	0/0:19,0:19:30.10:0,30,2160	0/0:34,0:34:57.15:0,57,3190	0/0:20,0:20:6.01:0,6,129	0/0:28,0:28:45.15:0,45,3025	0/0:29,0:29:51.18:0,51,3070	0/0:7,0:7:9.03:0,9,486	1/1:17,9:26:15.05:646,15,0	0/0:23,0:23:33.11:0,33,2099	0/0:30,0:29:51.18:0,51,3367	0/0:48,0:48:78.23:0,78,4266	0/0:32,0:32:54.17:0,54,3252	0/0:39,0:39:60.12:0,60,3163	0/0:35,0:35:51.08:0,51,2586	0/0:18,0:20:15.05:0,15,693	0/0:17,0:17:21.06:0,21,846	0/0:49,0:48:55.48:0,55,1990	0/0:15,0:15:27.08:0,27,1475	0/0:16,0:16:45.14:0,45,2769	0/0:63,0:63:99:0,138,7830	0/0:14,0:14:21.07:0,21,1423	0/0:20,0:19:42.14:0,42,2354	0/0:14,0:19:24.06:0,24,629	0/0:6,0:6:3.01:0,3,227
chr10	107554664	.	CT	C	909.85	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.530;DP=643;FS=0.000;HRun=1;HaplotypeScore=59.5455;InbreedingCoeff=0.9956;MQ=80.05;MQ0=0;MQRankSum=-0.581;QD=36.39;ReadPosRankSum=2.651;VQSLOD=3.9505;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,1991	0/0:11,0:11:33.11:0,33,527	0/0:17,0:17:51.15:0,51,773	0/0:16,0:16:47.71:0,48,671	0/0:25,0:25:72.23:0,72,1122	0/0:21,0:21:63.20:0,63,981	0/0:27,0:27:81.24:0,81,1245	0/0:23,0:23:69.21:0,69,1078	0/0:21,0:21:63.21:0,63,1001	0/0:26,0:26:75.25:0,75,1180	0/0:7,0:7:21.07:0,21,330	1/1:0,25:25:72.24:1005,72,0	0/0:27,0:27:81.26:0,81,1271	0/0:28,0:28:84.29:0,84,1340	0/0:15,0:15:45.15:0,45,719	0/0:15,0:15:45.14:0,45,694	0/0:28,0:28:81.28:0,81,1295	0/0:29,0:29:87.28:0,87,1361	0/0:26,0:26:78.26:0,78,1226	0/0:20,0:20:60.19:0,60,935	0/0:49,0:49:99:0,144,2261	0/0:15,0:15:45.15:0,45,719	0/0:13,0:13:39.13:0,39,622	0/0:25,0:25:75.26:0,75,1199	0/0:15,0:15:45.15:0,45,717	0/0:39,0:39:99:0,117,1870	0/0:20,0:20:60.19:0,60,935	0/0:18,0:18:54.18:0,54,852
chr10	107554873	.	C	CGGAGCTGCT	381.32	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.571;DP=577;FS=8.450;HRun=0;HaplotypeScore=162.4308;InbreedingCoeff=0.9148;MQ=72.41;MQ0=0;MQRankSum=-1.765;QD=63.55;ReadPosRankSum=-0.887;VQSLOD=3.0035;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,2623	1/1:1,4:6:12.04:467,12,0	0/0:9,0:9:18.53:0,19,495	0/0:8,0:8:21.04:0,21,372	0/0:10,0:10:27.08:0,27,704	0/0:13,0:13:30.10:0,30,873	0/0:29,0:29:81.28:0,81,2287	0/0:22,0:22:39.09:0,39,828	0/0:27,0:27:78.27:0,78,2216	0/0:21,0:21:39.11:0,39,1034	0/0:5,0:5:12.04:0,12,306	0/0:25,0:25:63.12:0,63,1668	0/0:29,0:29:75.26:0,75,2156	0/0:31,0:31:78.22:0,78,2092	0/0:18,0:18:51.18:0,51,1449	0/0:19,0:19:54.19:0,54,1520	0/0:39,0:39:99:0,99,2861	0/0:25,0:25:63.22:0,63,1768	0/0:19,0:19:42.08:0,42,963	0/0:10,0:10:20.85:0,21,478	0/0:51,0:51:99:0,129,3475	0/0:23,0:23:39.13:0,39,1123	0/0:10,0:10:21.03:0,21,536	0/0:40,0:40:99:0,108,2999	0/0:9,0:9:27.09:0,27,791	0/0:19,0:19:48.03:0,48,1271	0/0:15,0:15:42.13:0,42,1161	0/0:8,0:8:21.07:0,21,614
chr10	107555058	.	T	TAA	913.51	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.957;DP=553;FS=2.167;HRun=0;HaplotypeScore=71.0528;InbreedingCoeff=0.9922;MQ=105.61;MQ0=0;MQRankSum=-5.222;QD=41.52;ReadPosRankSum=-0.353;VQSLOD=4.9564;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.27:0,78,1269	1/1:0,7:7:18.06:345,18,0	0/0:32,0:32:96.27:0,96,1508	0/0:38,0:38:99:0,102,1635	0/0:10,0:10:27.09:0,27,437	0/0:21,0:21:60.18:0,60,931	0/0:17,0:17:48.15:0,48,759	0/0:30,0:30:90.29:0,90,1424	0/0:20,0:20:60.20:0,60,975	0/0:17,0:17:48.16:0,48,782	0/0:14,0:14:39.12:0,39,613	1/1:0,13:15:36.08:689,36,0	0/0:25,0:25:72.02:0,72,1117	0/0:21,0:21:63.22:0,63,1028	0/0:21,0:21:60.18:0,60,953	0/0:13,0:13:39.13:0,39,632	0/0:33,0:33:99:0,99,1589	0/0:21,0:21:57.15:0,57,873	0/0:17,0:17:51.16:0,51,789	0/0:16,0:16:48.15:0,48,759	0/0:39,0:39:99:0,117,1869	0/0:12,0:12:33.11:0,33,538	0/0:11,0:11:30.10:0,30,489	0/0:30,0:30:84.24:0,84,1317	0/0:9,0:9:27.09:0,27,438	0/0:21,0:21:60.20:0,60,977	0/0:8,0:8:24.08:0,24,391	0/0:8,0:8:24.08:0,24,388
chr10	107555743	.	GGT	G	131.04	PASS	AB=0.948;AC=13;AF=0.260;AN=50;BaseQRankSum=2.298;DP=571;FS=6.675;HRun=0;HaplotypeScore=70.0797;InbreedingCoeff=-0.0978;MQ=63.74;MQ0=13;MQRankSum=-0.270;QD=0.54;ReadPosRankSum=0.018;VQSLOD=0.7143;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:15.05:0,15,201	./.	./.	./.	0/1:10,0:10:25.79:26,0,29	1/1:25,0:25:8.96:75,9,0	0/1:25,2:26:23.06:23,0,52	0/0:22,0:22:4.22:0,4,24	0/1:23,1:23:14.01:14,0,195	0/0:12,0:11:6.91:0,7,90	0/0:14,0:14:5.99:0,6,50	1/1:22,0:23:5.68:28,6,0	0/0:14,0:14:3.01:0,3,44	0/0:17,0:17:2.99:0,3,24	0/1:21,4:24:20.07:20,0,97	0/0:17,0:17:12.03:0,12,153	0/1:37,4:41:5.01:5,0,288	0/1:12,1:13:23.06:23,0,58	0/1:16,0:15:22.44:22,0,52	0/0:17,0:16:9:0,9,87	0/0:30,0:33:9.02:0,9,107	0/0:16,0:16:12.04:0,12,169	0/0:13,0:13:3.01:0,3,44	0/0:31,0:30:21.05:0,21,284	0/1:15,1:16:17.03:17,0,138	0/1:21,0:21:18.41:18,0,28	0/0:13,0:13:9.49:0,9,103	0/0:10,0:10:3.01:0,3,36
chr10	107556160	.	TTAA	T	305.81	PASS	AC=10;AF=0.217;AN=46;BaseQRankSum=2.175;DP=205;FS=1.315;HRun=0;HaplotypeScore=35.0281;InbreedingCoeff=0.5571;MQ=58.18;MQ0=7;MQRankSum=1.565;QD=13.30;ReadPosRankSum=2.188;VQSLOD=3.1699;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:24.08:0,24,463	1/1:0,2:2:6.02:80,6,0	./.	./.	0/0:5,0:5:9.01:0,9,140	0/0:6,0:6:12.04:0,12,232	0/0:8,0:8:6.02:0,6,116	0/0:26,0:26:12.02:0,12,133	0/0:3,0:3:9.03:0,9,170	1/1:2,2:4:6.02:80,6,0	1/1:3,4:7:12.04:160,12,0	1/1:2,4:6:6.02:80,6,0	0/0:3,0:6:3.01:0,3,36	0/0:2,0:5:6.02:0,6,88	0/0:2,0:2:6.02:0,6,116	0/0:2,0:3:3.01:0,3,39	0/0:19,0:20:33.09:0,33,581	0/0:12,0:18:32.90:0,33,402	./.	0/0:4,0:4:2.98:0,3,22	0/0:1,0:1:3.01:0,3,50	./.	./.	0/0:1,0:3:3.01:0,3,39	1/1:3,1:4:3.01:40,3,0	0/0:4,0:4:9.02:0,9,143	0/0:8,0:9:6.02:0,6,68	0/0:15,0:15:39.13:0,39,753
chr10	107557122	.	GAA	G	2415.68	PASS	AB=0.833;AC=11;AF=0.196;AN=56;BaseQRankSum=7.404;DP=537;FS=0.900;HRun=12;HaplotypeScore=68.4955;InbreedingCoeff=0.8581;MQ=67.33;MQ0=3;MQRankSum=0.808;QD=19.02;ReadPosRankSum=-0.803;VQSLOD=2.6552;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:20:52.64:0,53,690	0/0:7,0:10:20.56:0,21,277	0/0:10,0:8:9.90:0,10,86	0/0:9,0:5:8.61:0,9,77	0/0:24,0:25:62.68:0,63,882	0/0:26,0:26:69.23:0,69,1011	0/1:8,2:10:42.98:43,0,161	1/1:6,23:29:66.01:646,66,0	0/0:18,0:22:63.19:0,63,873	0/0:27,0:28:65.65:0,66,850	0/0:19,0:25:65.61:0,66,824	0/0:25,0:26:66.22:0,66,968	0/0:12,0:12:30.09:0,30,430	0/0:17,0:17:48.10:0,48,653	0/0:13,0:13:39.12:0,39,563	0/0:6,0:7:21.06:0,21,297	0/0:19,0:21:47.63:0,48,643	0/0:27,0:27:66.22:0,66,984	1/1:5,20:26:62.83:604,63,0	1/1:4,23:26:60.08:610,60,0	1/1:1,7:8:15.03:153,15,0	0/0:13,0:14:38.62:0,39,544	0/0:21,0:21:54.16:0,54,767	0/0:11,0:11:33.11:0,33,476	0/0:27,0:28:68.69:0,69,937	0/0:21,1:22:20.12:0,20,600	1/1:5,22:27:53.99:537,54,0	0/0:12,0:15:41.03:0,41,445
chr10	107561187	.	A	AAG	206.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.778;DP=483;FS=8.359;HRun=0;HaplotypeScore=60.8621;InbreedingCoeff=0.6933;MQ=66.06;MQ0=1;MQRankSum=1.738;QD=29.43;ReadPosRankSum=-1.669;VQSLOD=4.3214;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:96.24:0,96,1164	1/1:2,5:7:18.06:296,18,0	0/0:10,0:9:7.38:0,7,190	0/0:13,0:12:0.09:0,0,171	0/0:5,0:5:12.04:0,12,151	0/0:17,0:17:48.15:0,48,603	0/0:24,0:24:57.18:0,57,719	0/0:25,0:25:48.11:0,48,587	0/0:17,0:17:45.11:0,45,549	0/0:12,0:12:27.08:0,27,330	0/0:9,0:9:24.08:0,24,303	0/0:14,0:14:36.11:0,36,454	0/0:14,0:14:33.11:0,33,417	0/0:19,0:19:48.14:0,48,592	0/0:15,0:15:42.11:0,42,504	0/0:13,0:13:21.07:0,21,265	0/0:29,0:29:81.23:0,81,1005	0/0:22,0:22:56.78:0,57,646	0/0:21,0:20:45.10:0,45,527	0/0:11,0:11:30.08:0,30,365	0/0:35,0:35:87.28:0,87,1096	0/0:7,0:7:12.04:0,12,151	0/0:8,0:8:21.07:0,21,265	0/0:41,0:41:99:0,105,1311	0/0:14,0:14:33.11:0,33,416	0/0:14,0:14:39.12:0,39,490	0/0:20,0:20:36.11:0,36,452	0/0:8,0:8:24.08:0,24,303
chr10	107561648	.	A	ATC	498.91	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.445;DP=657;FS=0.000;HRun=0;HaplotypeScore=85.1455;InbreedingCoeff=0.9437;MQ=86.32;MQ0=0;MQRankSum=-1.359;QD=41.58;ReadPosRankSum=0.927;VQSLOD=5.3981;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:99:0,101,1673	1/1:1,11:12:33.11:594,33,0	0/0:26,0:26:71.44:0,71,875	0/0:25,0:25:54.68:0,55,722	0/0:17,0:17:48.16:0,48,672	0/0:11,0:11:33.11:0,33,461	0/0:17,0:17:51.17:0,51,713	0/0:28,0:28:78.25:0,78,1065	0/0:21,0:21:63.18:0,63,846	0/0:19,0:19:48.16:0,48,672	0/0:9,0:9:27.09:0,27,378	0/0:28,0:28:81.26:0,81,1114	0/0:34,0:34:90.30:0,90,1260	0/0:21,0:21:60.17:0,60,803	0/0:32,0:32:90.30:0,90,1260	0/0:21,0:21:63.21:0,63,880	0/0:33,0:33:96.32:0,96,1342	0/0:27,0:27:78.26:0,78,1087	0/0:16,0:16:36.12:0,36,503	0/0:16,0:16:39.13:0,39,545	0/0:54,0:54:99:0,150,2081	0/0:26,0:26:75.25:0,75,1049	0/0:18,0:18:48.16:0,48,672	0/0:30,0:30:81.27:0,81,1134	0/0:25,0:24:72.23:0,72,987	0/0:22,0:22:57.17:0,57,780	0/0:17,0:17:51.17:0,51,714	0/0:4,0:4:9.03:0,9,124
chr10	107563317	.	ATAATAAGTTCCGT	A	474.18	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.788;DP=571;FS=6.854;HRun=0;HaplotypeScore=201.6911;InbreedingCoeff=0.9826;MQ=90.77;MQ0=0;MQRankSum=-3.756;QD=94.84;ReadPosRankSum=0.758;VQSLOD=2.9677;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,7308	1/1:0,5:5:15.05:563,15,0	0/0:18,0:18:51.18:0,51,2961	0/0:29,0:29:87.21:0,87,4194	0/0:24,0:24:60.21:0,60,3797	0/0:12,0:12:36.12:0,36,2382	0/0:27,0:27:81.28:0,81,5105	0/0:33,0:33:93.28:0,93,5775	0/0:23,0:23:69.24:0,69,3967	0/0:24,0:24:72.25:0,72,4385	0/0:9,0:9:27.09:0,27,1630	0/0:17,0:17:37.01:0,37,2316	0/0:16,0:16:48.16:0,48,3168	0/0:16,0:16:39.13:0,39,2324	0/0:17,0:17:42.14:0,42,2738	0/0:21,0:21:57.20:0,57,3511	0/0:17,0:17:51.16:0,51,2867	0/0:20,0:20:60.21:0,60,3663	0/0:15,0:15:42.12:0,42,2372	0/0:25,0:25:75.26:0,75,4900	0/0:20,0:20:60.21:0,60,3452	0/0:25,0:25:72.25:0,72,4621	0/0:21,0:21:60.21:0,60,3695	0/0:19,0:19:57.15:0,57,3374	0/0:16,0:16:48.16:0,48,2960	0/0:21,0:21:57.19:0,57,3508	0/0:28,0:28:84.29:0,84,5059	0/0:13,0:13:39.13:0,39,2286
chr10	107563382	.	GCT	G	368.26	PASS	AB=0.969;AC=21;AF=0.389;AN=54;BaseQRankSum=3.836;DP=600;FS=2.518;HRun=0;HaplotypeScore=85.3598;InbreedingCoeff=0.1141;MQ=72.94;MQ0=19;MQRankSum=0.586;QD=0.91;ReadPosRankSum=0.327;VQSLOD=1.7773;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:31:2.53:3,0,247	./.	1/1:59,0:24:2.29:9,2,0	0/1:67,0:24:0.03:0,0,0	0/0:13,0:13:12.02:0,12,141	0/1:17,1:18:25.58:26,0,101	0/0:19,0:19:6.46:0,6,67	0/1:25,0:25:0.04:0,0,0	0/0:18,0:18:18.04:0,18,235	0/0:22,0:22:21.11:0,21,216	0/1:7,0:7:20.23:20,0,129	0/0:8,0:21:3.35:0,3,16	0/1:13,0:13:61.60:62,0,93	0/0:10,0:10:12.04:0,12,157	0/1:13,0:13:25.23:25,0,160	0/0:14,0:18:8.69:0,9,80	0/0:15,0:15:23.80:0,24,293	0/1:13,1:14:14.48:14,0,171	1/1:20,1:19:9.02:98,9,0	1/1:14,7:20:10.84:58,11,0	1/1:13,8:20:8.99:81,9,0	0/1:24,0:24:5.68:6,0,118	0/1:22,0:22:32.77:33,0,228	0/0:20,0:20:0.21:0,0,342	0/0:14,0:15:18.04:0,18,216	0/1:15,6:21:16.09:16,0,224	1/1:13,13:27:3.97:73,4,0	0/0:19,0:16:12.03:0,12,154
chr10	107563631	.	ATG	A	100.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.711;DP=947;FS=0.994;HRun=0;HaplotypeScore=119.7651;InbreedingCoeff=0.8729;MQ=60.45;MQ0=2;MQRankSum=-0.079;QD=11.21;ReadPosRankSum=-0.341;VQSLOD=3.2724;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,2:55:56.68:0,57,1936	1/1:0,9:9:15.05:189,15,0	0/0:36,1:23:21.90:0,22,605	0/0:38,1:25:36.12:0,36,578	0/0:29,0:29:81.28:0,81,1339	0/0:38,0:39:99:0,99,1612	0/0:45,0:45:99:0,108,1795	0/0:29,0:29:57.16:0,57,895	0/0:41,0:41:99:0,108,1754	0/0:29,1:30:34.38:0,34,1098	0/0:21,0:21:51.17:0,51,812	0/0:31,1:32:46.52:0,47,1302	0/0:29,0:29:75.26:0,75,1237	0/0:33,0:33:84.27:0,84,1361	0/0:24,0:24:66.21:0,66,1066	0/0:35,0:35:99:0,99,1642	0/0:28,0:28:63.21:0,63,1033	0/0:26,0:26:71.81:0,72,1120	0/0:22,0:22:51.17:0,51,847	0/0:33,0:33:90.22:0,90,1364	0/0:83,5:87:99:0,112,3319	0/0:34,0:34:93.30:0,93,1506	0/0:24,0:24:60.19:0,60,968	0/0:55,0:55:99:0,154,2536	0/0:28,2:30:5.58:0,6,1168	0/0:39,0:39:99:0,105,1672	0/0:33,0:33:84.27:0,84,1370	0/0:7,0:7:18.06:0,18,299
chr10	107564053	.	T	TCCTGGCTGGG	1629.23	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.336;DP=789;FS=4.375;HRun=0;HaplotypeScore=241.9174;InbreedingCoeff=0.9997;MQ=87.86;MQ0=0;MQRankSum=-5.674;QD=135.77;ReadPosRankSum=0.199;VQSLOD=3.9630;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,148,4620	1/1:3,9:12:33.11:1724,33,0	0/0:30,0:30:75.55:0,76,1970	0/0:25,0:25:71.26:0,71,1832	0/0:23,0:23:63.22:0,63,2019	0/0:22,0:22:63.22:0,63,2051	0/0:25,0:25:69.22:0,69,2204	0/0:24,0:24:66.23:0,66,2026	0/0:32,0:32:90.30:0,90,2880	0/0:27,0:27:78.27:0,78,2572	0/0:22,0:22:63.16:0,63,1947	0/0:33,0:33:99:0,99,3232	0/0:20,0:20:60.19:0,60,1864	0/0:29,0:29:84.26:0,84,2647	0/0:34,0:34:99:0,99,3261	0/0:22,0:22:60.19:0,60,1926	0/0:35,0:35:96.32:0,96,3061	0/0:28,0:27:81.28:0,81,2646	0/0:25,0:25:66.22:0,66,1997	0/0:18,0:18:54.19:0,54,1724	0/0:52,0:52:99:0,147,4534	0/0:32,0:32:90.31:0,90,2877	0/0:16,0:16:45.14:0,45,1419	0/0:30,0:30:87.30:0,87,2845	0/0:28,0:28:75.26:0,75,2462	0/0:37,0:37:96.33:0,96,3110	0/0:31,0:31:93.30:0,93,2970	0/0:25,0:25:60.21:0,60,1890
chr10	107567995	.	ATCTC	A	81.76	PASS	AC=6;AF=0.188;AN=32;BaseQRankSum=1.020;DP=653;FS=0.000;HRun=0;HaplotypeScore=97.5648;InbreedingCoeff=0.3616;MQ=65.29;MQ0=32;MQRankSum=-1.359;QD=1.46;ReadPosRankSum=2.152;VQSLOD=1.4270;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:72,0:17:0.47:0,0,1	0/0:21,0:21:0:0,0,0	0/0:21,0:20:3.01:0,3,30	0/0:27,0:27:3.48:0,3,71	./.	0/0:21,0:21:3.88:0,4,20	0/0:26,0:25:6.02:0,6,127	./.	./.	1/1:17,0:18:2.74:27,3,0	./.	0/0:16,0:16:3.01:0,3,69	0/0:20,0:20:3.01:0,3,43	0/0:14,0:14:0.47:0,0,1	1/1:15,4:18:6.02:91,6,0	0/0:24,0:22:0:0,0,0	./.	./.	./.	./.	0/0:19,0:18:2.98:0,3,22	./.	0/0:19,0:18:3.01:0,3,67	1/1:17,0:19:6.01:56,6,0	0/0:11,0:11:0.47:0,0,1
chr10	107568245	.	TTCTCTCTC	T	124.92	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=2.724;DP=562;FS=0.000;HRun=0;HaplotypeScore=135.0744;InbreedingCoeff=0.5147;MQ=68.13;MQ0=8;MQRankSum=-2.783;QD=5.43;ReadPosRankSum=-0.512;VQSLOD=2.4916;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:51.17:0,51,1655	0/0:12,0:11:5.51:0,6,120	./.	./.	0/0:17,0:17:15.02:0,15,406	0/0:16,0:16:24.54:0,25,730	0/0:29,0:31:30.10:0,30,1063	0/0:20,0:19:6.02:0,6,160	0/0:15,0:14:17.96:0,18,449	0/0:19,0:17:15.94:0,16,443	0/0:12,0:12:6.02:0,6,237	1/1:17,6:22:8.69:207,9,0	0/0:15,0:15:18.53:0,19,558	0/0:17,0:16:15.05:0,15,459	0/0:13,0:13:15.05:0,15,503	0/0:10,0:9:9.03:0,9,310	0/0:26,0:25:57.15:0,57,1834	0/0:19,0:19:39.13:0,39,1414	0/0:16,0:16:8.15:0,8,222	0/0:14,0:14:0.89:0,1,2	0/0:22,0:21:9.50:0,10,324	0/0:20,0:20:24.08:0,24,869	0/0:22,0:23:33.51:0,34,747	0/0:30,0:30:33.11:0,33,1220	0/0:21,0:21:9.03:0,9,278	0/0:23,0:23:24.55:0,25,705	0/0:12,0:18:12.04:0,12,414	0/0:19,0:18:12.04:0,12,347
chr10	107569359	.	AACAAAC	A	541.56	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.440;DP=698;FS=8.682;HRun=0;HaplotypeScore=134.4611;InbreedingCoeff=0.9945;MQ=56.69;MQ0=14;MQRankSum=-5.541;QD=38.68;ReadPosRankSum=0.763;VQSLOD=3.2966;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:99:0,144,4252	0/0:7,0:7:20.96:0,21,462	0/0:31,0:15:38.58:0,39,984	0/0:28,0:16:41.46:0,41,976	0/0:17,0:17:51.17:0,51,1600	0/0:28,0:28:84.29:0,84,2630	0/0:34,0:34:93.30:0,93,2716	0/0:24,0:24:69.22:0,69,1610	0/0:22,0:22:60.20:0,60,1878	0/0:24,0:24:65.33:0,65,2098	0/0:16,0:16:47.61:0,48,1385	1/1:0,14:14:27.09:636,27,0	0/0:19,0:19:54.17:0,54,1734	0/0:22,0:22:66.23:0,66,2199	0/0:14,0:14:42.13:0,42,1347	0/0:18,0:18:54.18:0,54,1738	0/0:39,0:39:99:0,117,3509	0/0:30,0:30:42.26:0,42,2408	0/0:28,0:27:81.28:0,81,2153	0/0:22,0:22:61.09:0,61,1963	0/0:41,0:41:99:0,120,3853	0/0:21,0:21:63.20:0,63,1962	0/0:12,0:12:36.12:0,36,1154	0/0:48,0:48:99:0,141,4177	0/0:21,0:21:60.20:0,60,1899	0/0:39,0:39:99:0,117,3343	0/0:15,0:15:45.15:0,45,1528	0/0:14,0:14:42.14:0,42,1078
chr10	107569373	.	C	CA	200.21	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.234;DP=685;FS=8.475;HRun=3;HaplotypeScore=69.0881;InbreedingCoeff=0.9625;MQ=59.81;MQ0=7;MQRankSum=-1.714;QD=28.60;ReadPosRankSum=-1.557;VQSLOD=1.9084;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,117,1572	1/1:0,7:7:21.07:292,21,0	0/0:29,0:19:28.57:0,29,590	0/0:29,0:18:36.50:0,37,450	0/0:19,0:19:57.16:0,57,672	0/0:27,0:27:75.23:0,75,899	0/0:30,0:30:87.25:0,87,1030	0/0:23,0:23:41.72:0,42,499	0/0:20,0:20:60.17:0,60,707	0/0:24,0:24:59.58:0,60,750	0/0:14,0:14:41.72:0,42,477	0/0:14,0:14:11.64:0,12,257	0/0:21,0:21:60.18:0,60,719	0/0:25,0:25:75.19:0,75,873	0/0:13,0:13:39.12:0,39,465	0/0:17,0:17:48.15:0,48,574	0/0:41,0:41:99:0,120,1436	0/0:27,0:27:48.72:0,49,807	0/0:25,0:25:68.87:0,69,758	0/0:19,0:19:53.66:0,54,635	0/0:46,0:46:99:0,129,1534	0/0:21,0:21:63.19:0,63,754	0/0:11,0:11:33.10:0,33,396	0/0:41,0:41:99:0,114,1324	0/0:25,0:25:69.19:0,69,811	0/0:36,0:36:99:0,105,1259	0/0:19,0:18:54.16:0,54,646	0/0:13,0:13:39.12:0,39,467
chr10	107569757	.	CTCTG	C	187.79	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.381;DP=755;FS=3.772;HRun=0;HaplotypeScore=127.2178;InbreedingCoeff=0.9839;MQ=76.16;MQ0=1;MQRankSum=0.429;QD=17.07;ReadPosRankSum=-1.027;VQSLOD=3.3249;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,3054	1/1:2,9:11:15.05:276,15,0	0/0:48,0:43:88.99:0,89,2252	0/0:50,0:43:99:0,100,2270	0/0:34,0:34:99:0,102,2493	0/0:25,0:25:75.24:0,75,1881	0/0:21,0:21:60.15:0,60,1414	0/0:36,0:35:97.18:0,97,2300	0/0:24,0:24:72.23:0,72,1774	0/0:23,0:23:63.21:0,63,1693	0/0:23,0:23:66.23:0,66,1717	0/0:17,0:17:51.16:0,51,1320	0/0:18,0:18:54.17:0,54,1318	0/0:25,0:25:75.26:0,75,2008	0/0:27,0:26:81.28:0,81,2144	0/0:16,0:16:36.11:0,36,906	0/0:31,0:31:87.30:0,87,2231	0/0:20,0:20:60.21:0,60,1466	0/0:25,0:24:66.23:0,66,1710	0/0:26,0:26:75.24:0,75,1945	0/0:32,0:32:87.22:0,87,2121	0/0:23,0:23:63.20:0,63,1561	0/0:17,0:17:42.13:0,42,1075	0/0:34,0:34:93.30:0,93,2344	0/0:21,0:21:54.18:0,54,1387	0/0:33,0:33:90.31:0,90,2342	0/0:31,0:30:87.30:0,87,2257	0/0:22,0:22:60.17:0,60,1425
chr10	107571461	.	TTCCTGCACCTGC	T	1212.64	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=7.424;DP=816;FS=0.861;HRun=0;HaplotypeScore=267.8188;InbreedingCoeff=0.7432;MQ=72.03;MQ0=0;MQRankSum=-5.540;QD=18.10;ReadPosRankSum=-0.720;VQSLOD=2.0638;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,129,4394	1/1:1,8:9:8.84:269,9,0	0/0:32,0:30:8.18:0,8,470	0/0:42,0:36:22.04:0,22,418	0/0:14,0:14:27.07:0,27,901	0/1:14,0:14:8.56:9,0,984	0/0:31,0:31:60.16:0,60,2069	0/0:25,0:25:29.95:0,30,632	0/0:28,0:28:63.20:0,63,2709	0/0:35,0:35:72.21:0,72,2811	0/0:20,0:20:38.98:0,39,1303	1/1:9,35:44:32.90:1055,33,0	0/0:23,0:23:51.10:0,51,1641	0/0:39,0:39:69.20:0,69,2931	0/0:26,0:26:54.17:0,54,2060	0/0:27,0:27:51.17:0,51,2474	0/0:24,0:24:63.19:0,63,2695	0/0:19,0:19:45.13:0,45,1900	0/0:28,0:28:30.06:0,30,769	0/0:13,0:13:30.08:0,30,1316	0/0:93,0:92:99:0,189,7400	0/0:25,0:25:51.15:0,51,1855	0/0:17,0:17:36.12:0,36,1343	0/0:32,0:32:78.14:0,78,3299	0/0:26,0:26:52.39:0,52,1777	0/0:45,0:45:87.28:0,87,4115	0/0:20,0:20:42.10:0,42,2286	0/0:10,0:10:18.06:0,18,835
chr10	107572287	.	GGTT	G	231.30	PASS	AB=0.745;AC=1;AF=0.018;AN=56;BaseQRankSum=6.045;DP=1017;FS=7.808;HRun=0;HaplotypeScore=136.5904;InbreedingCoeff=-0.0182;MQ=57.68;MQ0=38;MQRankSum=-5.423;QD=6.09;ReadPosRankSum=-3.067;VQSLOD=1.7516;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,143,3422	0/0:9,0:9:27.09:0,27,652	0/0:46,0:18:30.10:0,30,882	0/0:59,0:22:53.92:0,54,1017	0/0:13,0:13:36.11:0,36,778	0/0:22,0:22:62.70:0,63,1433	0/0:38,0:38:99:0,112,2510	0/0:50,0:40:99:0,114,2497	0/0:60,0:60:99:0,178,4250	0/0:41,0:41:99:0,123,2722	0/0:19,0:19:57.20:0,57,1372	0/1:25,13:38:99:306,0,1683	0/0:37,0:37:99:0,111,2590	0/0:60,0:60:99:0,181,4297	0/0:50,0:50:99:0,151,3545	0/0:42,0:42:99:0,126,2957	0/0:39,0:38:99:0,117,2713	0/0:27,0:27:62.05:0,62,1711	0/0:21,0:15:42.10:0,42,854	0/0:19,0:19:57.18:0,57,1257	0/0:70,0:68:99:0,181,4268	0/0:28,0:28:81.28:0,81,1825	0/0:17,0:17:51.15:0,51,1106	0/0:54,0:54:99:0,147,3513	0/0:16,0:16:48.16:0,48,1146	0/0:28,0:28:84.27:0,84,1925	0/0:38,0:38:99:0,114,2637	0/0:27,0:27:81.28:0,81,1758
chr10	107574470	.	AC	A	1288.04	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.701;DP=732;FS=2.917;HRun=3;HaplotypeScore=70.5934;InbreedingCoeff=0.9916;MQ=86.84;MQ0=0;MQRankSum=-1.318;QD=33.03;ReadPosRankSum=2.296;VQSLOD=4.3119;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,172,2459	1/1:0,11:11:30.09:368,30,0	0/0:27,0:27:75.05:0,75,996	0/0:31,0:31:80.76:0,81,1105	0/0:28,0:28:84.27:0,84,1182	0/0:29,0:29:84.28:0,84,1208	0/0:22,0:22:66.22:0,66,950	0/0:25,0:25:69.22:0,69,976	0/0:26,0:26:78.24:0,78,1087	0/0:25,0:25:69.22:0,69,975	0/0:18,0:18:54.18:0,54,777	1/1:0,28:28:84.26:1041,84,0	0/0:23,0:23:69.23:0,69,994	0/0:27,0:27:81.24:0,81,1112	0/0:27,0:27:81.25:0,81,1131	0/0:18,0:18:54.17:0,54,761	0/0:37,0:37:99:0,102,1431	0/0:25,0:25:60.20:0,60,861	0/0:25,0:25:72.19:0,72,965	0/0:18,0:18:54.14:0,54,723	0/0:44,0:44:99:0,132,1880	0/0:31,0:31:87.29:0,87,1251	0/0:24,0:24:72.23:0,72,1017	0/0:32,0:32:93.26:0,93,1298	0/0:17,0:17:51.15:0,51,700	0/0:28,0:28:84.27:0,84,1190	0/0:20,0:20:60.19:0,60,842	0/0:5,0:5:15.05:0,15,214
chr10	107575049	.	GA	G	345.92	PASS	AB=0.925;AC=7;AF=0.125;AN=56;BaseQRankSum=5.762;DP=750;FS=1.070;HRun=14;HaplotypeScore=95.0081;InbreedingCoeff=0.4115;MQ=77.53;MQ0=4;MQRankSum=1.004;QD=2.86;ReadPosRankSum=2.108;VQSLOD=0.3719;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,2:54:64.35:0,64,826	1/1:4,13:17:35.63:246,36,0	0/0:40,1:29:10.09:0,10,231	0/1:38,0:25:3.15:3,0,101	0/1:19,3:23:22.87:23,0,218	0/0:18,1:20:12.82:0,13,271	0/0:18,2:20:3.88:0,4,316	0/0:21,1:22:3.17:0,3,162	0/0:33,2:37:42.53:0,43,637	0/0:25,1:28:15.12:0,15,256	0/0:24,3:27:26.24:0,26,505	0/0:25,0:25:22.54:0,23,220	0/0:18,1:18:12.45:0,12,258	0/0:18,0:18:41.99:0,42,369	0/0:33,2:35:20.09:0,20,439	0/0:25,2:27:18.75:0,19,446	0/0:24,0:28:58.88:0,59,500	0/1:19,3:24:17.12:17,0,259	1/1:10,9:19:8.48:187,8,0	0/0:26,1:28:33.19:0,33,412	0/0:21,2:23:6.89:0,7,345	0/0:23,3:28:12.22:0,12,364	0/0:24,0:24:41.97:0,42,374	0/0:18,1:19:24.44:0,24,356	0/0:25,2:28:24.14:0,24,464	0/0:26,0:30:47.69:0,48,407	0/0:30,2:31:45.30:0,45,510	0/0:11,0:16:35.41:0,35,278
chr10	107575061	.	AAAG	A	247.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.312;DP=730;FS=1.119;HRun=0;HaplotypeScore=113.6720;InbreedingCoeff=0.9841;MQ=70.65;MQ0=4;MQRankSum=-2.488;QD=11.26;ReadPosRankSum=0.312;VQSLOD=3.4970;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:84.27:0,84,1462	0/0:18,0:18:36.02:0,36,348	0/0:36,0:23:17.59:0,18,192	0/0:35,0:22:23.41:0,23,241	0/0:22,0:22:39.07:0,39,551	0/0:20,0:20:44.67:0,45,638	0/0:23,0:23:46.04:0,46,691	0/0:23,0:23:42.03:0,42,519	0/0:39,0:39:81.20:0,81,1306	0/0:26,0:26:51.10:0,51,739	0/0:30,0:30:78.12:0,78,1178	1/1:11,11:22:27.05:342,27,0	0/0:18,0:17:36.04:0,36,568	0/0:20,0:20:41.85:0,42,720	0/0:30,0:30:57.15:0,57,954	0/0:25,0:25:63.18:0,63,1031	0/0:34,0:34:27.16:0,27,1002	0/0:22,0:22:42.08:0,42,623	0/0:14,0:16:32.22:0,32,293	0/0:28,0:28:60.11:0,60,893	0/0:24,0:24:54.13:0,54,880	0/0:27,0:27:54.61:0,55,858	0/0:20,0:20:42.11:0,42,691	0/0:17,0:17:39.11:0,39,658	0/0:29,0:29:63.10:0,63,983	0/0:34,0:34:65.89:0,66,921	0/0:33,0:33:75.16:0,75,1193	0/0:16,0:16:24.06:0,24,357
chr10	107578117	.	GAGCTCAGGGTCCTGAGGTACCGGATGGCTGACCGAGC	G	1908.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.085;DP=599;FS=3.225;HRun=0;HaplotypeScore=521.5812;InbreedingCoeff=0.7752;MQ=85.27;MQ0=0;MQRankSum=-2.859;QD=127.20;ReadPosRankSum=1.987;VQSLOD=1.9553;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.28:0,93,10875	0/0:3,0:3:6.02:0,6,472	0/0:18,0:18:40.69:0,41,1878	0/0:21,0:21:34.78:0,35,1540	0/0:23,0:23:66.23:0,66,9263	0/0:25,0:24:69.24:0,69,7644	0/0:28,0:28:72.23:0,72,7453	0/0:35,0:35:99:0,99,8069	0/0:19,0:19:51.17:0,51,6091	0/0:21,0:21:57.20:0,57,6844	0/0:16,0:16:45.15:0,45,3968	1/1:5,10:15:21.07:2000,21,0	0/0:16,0:16:42.14:0,42,5741	0/0:17,0:17:51.18:0,51,5940	0/0:27,0:27:81.28:0,81,11566	0/0:20,0:20:51.16:0,51,6215	0/0:33,0:33:87.30:0,87,10599	0/0:32,0:32:87.30:0,87,11838	0/0:14,0:14:36.12:0,36,3665	0/0:17,0:17:48.16:0,48,5533	0/0:48,0:48:99:0,138,16022	0/0:18,0:18:51.18:0,51,7576	0/0:13,0:13:33.10:0,33,2920	0/0:27,0:27:78.27:0,78,10730	0/0:23,0:23:69.24:0,69,8658	0/0:16,0:16:48.16:0,48,5460	0/0:18,0:18:54.19:0,54,7953	0/0:2,0:2:3.01:0,3,508
chr10	107578759	.	AGTGTGTGTGT	A	196.73	PASS	AC=4;AF=0.091;AN=44;BaseQRankSum=2.811;DP=505;FS=8.599;HRun=0;HaplotypeScore=125.2812;InbreedingCoeff=0.4428;MQ=71.14;MQ0=30;MQRankSum=-1.485;QD=3.23;ReadPosRankSum=0.887;VQSLOD=2.0639;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:18.06:0,18,458	0/0:6,0:6:3.01:0,3,114	./.	./.	0/0:6,0:5:6.02:0,6,215	0/0:12,0:12:15.52:0,16,325	0/0:23,0:24:9.03:0,9,302	./.	0/0:10,0:9:8.99:0,9,153	0/0:12,0:11:6.02:0,6,190	./.	0/0:16,0:15:6.02:0,6,102	0/0:13,0:15:10.28:0,10,303	0/0:16,0:16:6.02:0,6,240	0/0:18,0:18:15.05:0,15,430	0/0:16,0:16:9.17:0,9,254	0/0:34,0:34:39.13:0,39,1302	0/0:32,0:32:39.13:0,39,1307	0/0:16,0:15:1.55:0,2,4	./.	1/1:39,0:38:4.82:32,5,0	0/0:8,0:8:3.01:0,3,90	./.	0/0:30,0:29:21.07:0,21,671	0/0:10,0:10:9.03:0,9,297	0/0:9,0:8:3.01:0,3,68	1/1:17,5:22:9.03:262,9,0	0/0:9,0:8:7.27:0,7,203
chr10	107579506	.	GA	G	446.38	PASS	AB=0.856;AC=16;AF=0.286;AN=56;BaseQRankSum=4.096;DP=653;FS=4.582;HRun=15;HaplotypeScore=77.5452;InbreedingCoeff=0.1678;MQ=59.12;MQ0=22;MQRankSum=-0.258;QD=1.72;ReadPosRankSum=0.707;VQSLOD=-0.6892;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:34.26:0,34,388	1/1:1,0:6:8.14:23,8,0	0/1:99,1:24:6.47:6,0,109	0/0:102,4:20:1.63:0,2,68	0/0:16,0:17:0.68:0,1,122	0/1:20,2:22:13.15:13,0,233	0/0:17,1:20:12.08:0,12,275	0/1:14,5:20:21.99:65,0,22	0/0:14,0:14:15.56:0,16,243	0/0:20,0:21:3.43:0,3,228	0/1:7,1:8:4.27:4,0,91	1/1:11,3:14:28.39:170,28,0	0/0:13,1:14:7.69:0,8,176	0/0:12,0:12:6:0,6,160	0/0:14,0:14:4.93:0,5,147	0/0:11,0:11:26.84:0,27,225	0/0:33,0:35:71.02:0,71,645	0/0:37,0:37:49.70:0,50,643	1/1:11,6:17:2.70:133,3,0	1/1:1,4:5:8.83:57,9,0	0/1:6,2:9:32.12:46,0,32	0/0:8,0:9:17.84:0,18,146	0/0:10,0:10:18:0,18,158	0/0:22,1:24:28.44:0,28,348	0/1:13,1:14:9.23:9,0,152	0/1:21,1:22:3.51:4,0,233	0/1:10,8:18:49.47:72,0,49	0/0:16,0:15:8.78:0,9,178
chr10	107580669	.	AC	A	4041.98	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.043;DP=650;FS=5.479;HRun=7;HaplotypeScore=68.0984;InbreedingCoeff=0.9998;MQ=86.95;MQ0=0;MQRankSum=-0.386;QD=26.59;ReadPosRankSum=0.267;VQSLOD=4.3613;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,1381	1/1:0,11:11:32.99:323,33,0	0/0:26,0:26:44.23:0,44,523	0/0:27,0:27:53.99:0,54,593	0/0:23,0:23:66.20:0,66,817	0/0:12,0:12:33.09:0,33,402	0/0:33,0:33:93.28:0,93,1148	1/1:2,17:19:51.06:493,51,0	0/0:16,0:16:48.06:0,48,545	0/0:24,0:24:69.21:0,69,856	0/0:12,0:12:33.10:0,33,411	1/1:0,23:23:63.14:643,63,0	0/0:20,0:20:57.17:0,57,701	0/0:26,0:26:69.21:0,69,854	0/0:22,0:22:63.17:0,63,765	0/0:30,0:30:84.20:0,84,1037	0/0:25,0:25:72.20:0,72,879	0/0:22,0:22:60.18:0,60,741	1/1:1,15:16:45.09:452,45,0	1/1:0,23:23:60.10:601,60,0	1/1:1,42:43:99:1102,108,0	0/0:19,0:19:51.13:0,51,613	0/0:21,0:21:52.25:0,52,695	0/0:29,0:29:78.23:0,78,956	0/0:27,0:27:78.24:0,78,969	0/0:29,0:29:78.25:0,78,980	1/1:1,16:17:42.10:428,42,0	0/0:15,0:15:45.13:0,45,554
chr10	107583029	.	GGA	G	812.10	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.665;DP=607;FS=0.000;HRun=0;HaplotypeScore=86.2437;InbreedingCoeff=0.8442;MQ=75.08;MQ0=3;MQRankSum=0.011;QD=30.08;ReadPosRankSum=1.452;VQSLOD=5.3927;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.31:0,90,1538	0/0:3,0:3:3.01:0,3,51	0/0:35,0:26:52.58:0,53,676	0/0:42,0:29:42.07:0,42,446	0/0:16,0:16:30.10:0,30,501	0/0:16,0:16:39.13:0,39,654	0/0:35,0:35:99:0,99,1670	0/0:18,0:17:45.15:0,45,727	0/0:28,0:28:69.22:0,69,1148	0/0:22,0:22:48.16:0,48,795	0/0:12,0:12:36.12:0,36,610	1/1:2,25:27:69.22:907,69,0	0/0:22,0:22:60.18:0,60,981	0/0:21,0:21:63.22:0,63,1077	0/0:25,0:25:69.24:0,69,1170	0/0:26,0:26:69.23:0,69,1167	0/0:22,0:22:60.21:0,60,1028	0/0:28,0:28:78.27:0,78,1333	0/0:8,0:8:24.08:0,24,403	0/0:13,0:13:30.10:0,30,514	0/0:42,0:42:99:0,106,1758	0/0:13,0:13:33.11:0,33,566	0/0:10,0:10:21.07:0,21,360	0/0:40,0:40:99:0,99,1673	0/0:10,0:10:30.10:0,30,513	0/0:17,0:17:48.16:0,48,816	0/0:15,0:14:39.13:0,39,668	0/0:9,0:9:27.09:0,27,432
chr10	107584246	.	G	GGA	685.95	PASS	AB=0.938;AC=9;AF=0.161;AN=56;BaseQRankSum=-2.679;DP=417;FS=3.117;HRun=0;HaplotypeScore=62.8541;InbreedingCoeff=0.6864;MQ=76.19;MQ0=5;MQRankSum=4.073;QD=9.27;ReadPosRankSum=-1.783;VQSLOD=2.8119;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:52.89:0,53,465	0/0:3,0:3:3:0,3,27	0/0:42,0:28:7.10:0,7,131	0/0:43,0:26:19.72:0,20,133	0/0:7,0:7:14.98:0,15,154	0/0:9,0:9:17.98:0,18,177	0/0:13,0:13:23.94:0,24,235	1/1:19,1:20:20.90:205,21,0	0/0:11,0:11:22.94:0,23,185	0/0:14,0:13:17.06:0,17,160	0/0:8,0:8:15.02:0,15,152	0/0:11,0:11:12.20:0,12,72	0/0:14,0:14:20.93:0,21,205	0/0:11,0:11:11.84:0,12,86	0/0:10,0:10:22.77:0,23,193	0/0:11,0:12:29.89:0,30,310	0/0:25,0:25:58.95:0,59,536	0/0:16,0:16:34.81:0,35,316	1/1:8,7:15:16.75:197,17,0	0/1:14,1:15:9.65:131,0,10	1/1:9,1:10:2.42:148,2,0	0/0:8,0:8:8.84:0,9,67	0/0:10,0:10:13.53:0,14,102	0/0:15,0:15:4.47:0,4,202	0/0:16,0:16:24.34:0,24,238	0/0:13,0:13:27:0,27,264	1/1:3,11:14:11.97:154,12,0	0/0:7,0:7:17.90:0,18,154
chr10	107585287	.	GGT	G	545.73	PASS	AB=0.958;AC=18;AF=0.321;AN=56;BaseQRankSum=0.298;DP=698;FS=7.786;HRun=0;HaplotypeScore=96.1983;InbreedingCoeff=0.3074;MQ=73.49;MQ0=19;MQRankSum=0.375;QD=1.87;ReadPosRankSum=-0.307;VQSLOD=1.3128;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,1:50:6.75:0,7,404	0/0:9,0:9:9.02:0,9,115	0/0:38,0:21:0:0,0,0	0/0:44,0:25:0:0,0,0	0/1:15,1:16:21.49:27,0,21	1/1:14,3:18:8.86:79,9,0	0/1:42,1:42:37.37:37,0,187	0/0:24,0:21:2.97:0,3,20	0/0:19,0:26:21.02:0,21,220	0/0:23,0:22:6.01:0,6,60	0/0:6,0:10:8:0,8,77	1/1:11,0:17:8.52:42,9,0	0/0:10,0:14:5.93:0,6,63	0/0:12,0:16:21:0,21,196	0/0:11,0:18:12:0,12,105	0/0:17,1:24:0.74:0,1,335	0/0:26,0:33:27.02:0,27,268	0/1:14,2:29:28.15:28,0,261	1/1:25,0:24:2.84:14,3,0	1/1:14,1:19:8.86:79,9,0	1/1:45,6:52:32.74:311,33,0	0/0:21,0:27:12.02:0,12,141	0/1:13,0:16:9.20:9,0,90	0/1:21,1:25:2.29:2,0,264	0/0:21,0:23:6.91:0,7,216	0/0:22,0:22:18.14:0,18,173	1/1:12,0:11:5.92:65,6,0	0/1:8,1:13:16.98:17,0,108
chr10	107587187	.	T	TGTCTCACCCC	2467.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.181;DP=643;FS=5.712;HRun=0;HaplotypeScore=184.8983;InbreedingCoeff=0.9856;MQ=72.44;MQ0=0;MQRankSum=-7.027;QD=88.11;ReadPosRankSum=-1.103;VQSLOD=3.3206;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,4586	0/0:12,0:12:33.07:0,33,955	0/0:14,0:14:24.49:0,24,1209	0/0:7,0:7:17.98:0,18,369	0/0:11,0:11:33.06:0,33,961	0/0:24,0:24:72.23:0,72,2343	0/0:27,0:27:75.24:0,75,2311	0/0:29,0:29:81.23:0,81,2401	0/0:31,0:31:93.31:0,93,2957	0/0:20,0:20:57.20:0,57,1882	0/0:14,0:14:39.13:0,39,1285	1/1:11,11:28:60.21:2562,60,0	0/0:27,0:27:78.27:0,78,2609	0/0:25,0:25:75.24:0,75,2341	0/0:23,0:23:69.22:0,69,2233	0/0:25,0:25:72.23:0,72,2347	0/0:30,0:30:87.24:0,87,2545	0/0:18,0:18:54.19:0,54,1774	0/0:17,0:17:51.15:0,51,1576	0/0:18,0:18:54.18:0,54,1691	0/0:57,0:57:99:0,169,5345	0/0:18,0:18:51.11:0,51,1577	0/0:13,0:13:39.13:0,39,1196	0/0:28,0:28:81.28:0,81,2690	0/0:22,0:22:63.22:0,63,2109	0/0:24,0:24:71.98:0,72,2276	0/0:27,0:27:81.26:0,81,2504	0/0:7,0:7:21.07:0,21,713
chr10	107588067	.	A	AG	6091.81	PASS	AB=0.902;AC=52;AF=0.929;AN=56;BaseQRankSum=-0.912;DP=523;FS=8.095;HRun=1;HaplotypeScore=172.7697;InbreedingCoeff=0.4134;MQ=76.68;MQ0=0;MQRankSum=-2.163;QD=11.97;ReadPosRankSum=4.391;VQSLOD=3.3291;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:40:85.76:398,86,0	1/1:8,0:8:16.30:80,16,0	0/1:12,1:13:7.34:7,0,181	0/0:14,0:14:2.91:0,3,88	1/1:6,1:7:12.20:78,12,0	1/1:16,2:18:40.56:266,41,0	1/1:36,0:36:78.32:431,78,0	1/1:16,0:16:35.34:202,35,0	1/1:28,0:28:68.08:352,68,0	1/1:11,2:12:31.36:211,31,0	1/1:11,0:11:24.60:133,25,0	1/1:24,0:24:54.90:310,55,0	1/1:16,0:16:34.12:164,34,0	1/1:22,1:23:56.77:292,57,0	1/1:21,0:21:42.52:205,43,0	1/1:18,0:18:45.95:232,46,0	1/1:16,0:16:36.84:211,37,0	1/1:30,1:30:71.30:382,71,0	1/1:11,1:12:25.04:167,25,0	0/1:6,1:7:0.73:43,0,1	1/1:41,0:41:99:593,115,0	1/1:11,2:13:34.36:240,34,0	1/1:11,0:11:8.11:63,8,0	1/1:31,2:33:78.06:462,78,0	1/1:13,0:13:25.57:123,26,0	1/1:13,0:13:29.42:187,29,0	1/1:21,0:21:38.90:189,39,0	1/1:6,0:6:14.17:70,14,0
chr10	107592567	.	CTG	C	539.05	PASS	AB=0.938;AC=8;AF=0.143;AN=56;BaseQRankSum=5.787;DP=756;FS=6.395;HRun=0;HaplotypeScore=111.4287;InbreedingCoeff=0.1225;MQ=58.54;MQ0=8;MQRankSum=-1.055;QD=3.82;ReadPosRankSum=3.188;VQSLOD=2.0606;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,120,1771	0/1:9,0:9:7.01:7,0,177	0/0:39,0:11:3.01:0,3,47	0/0:34,0:15:11.98:0,12,125	0/0:12,0:12:30.10:0,30,453	0/0:21,1:22:6.17:0,6,561	0/0:32,1:32:42.17:0,42,1055	0/0:31,0:30:48.16:0,48,744	0/1:21,1:22:0.65:1,0,752	0/0:36,0:36:78.21:0,78,1116	0/0:11,0:11:21.07:0,21,335	1/1:10,20:31:50.70:565,51,0	0/0:18,1:19:17.93:0,18,711	0/1:20,2:22:29.81:30,0,491	0/0:21,0:21:39.12:0,39,597	0/0:17,1:18:12.22:0,12,658	0/0:32,1:33:51.03:0,51,1252	0/0:29,1:29:56.98:0,57,883	0/0:12,0:11:21.06:0,21,310	0/0:18,0:17:24.08:0,24,380	0/0:72,3:73:49.74:0,50,1615	0/0:24,0:24:54.16:0,54,839	0/0:13,0:13:33.11:0,33,527	0/0:61,2:63:59.46:0,59,1781	0/1:16,2:18:27.44:27,0,444	0/0:16,1:18:17.71:0,18,600	0/1:25,2:27:23.75:24,0,588	0/1:11,1:12:17.87:18,0,222
chr10	107592593	.	CTG	C	288.31	PASS	AB=0.914;AC=13;AF=0.250;AN=52;BaseQRankSum=4.252;DP=761;FS=8.339;HRun=0;HaplotypeScore=119.0760;InbreedingCoeff=-0.1860;MQ=53.25;MQ0=15;MQRankSum=-0.385;QD=0.92;ReadPosRankSum=1.660;VQSLOD=1.8694;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:86.94:0,87,1129	./.	./.	0/0:27,0:6:6.02:0,6,86	0/0:11,0:12:24.06:0,24,325	0/1:17,2:19:16.31:16,0,183	0/1:38,2:39:52.18:52,0,463	0/0:30,0:27:38.34:0,38,368	0/1:24,1:26:36.91:37,0,439	0/1:30,1:29:23.49:23,0,439	0/1:13,3:16:41.01:41,0,216	1/1:20,0:34:11.27:76,11,0	0/0:22,0:21:30.07:0,30,412	0/0:20,0:21:23.66:0,24,377	0/1:19,0:19:0.79:1,0,362	0/1:15,4:20:53.62:54,0,505	0/1:31,2:34:49.32:49,0,599	0/1:27,4:30:13.63:14,0,627	0/0:14,0:17:8.97:0,9,77	0/0:8,0:18:0.38:0,0,35	0/0:72,0:70:53.66:0,54,450	0/1:23,2:25:33.93:34,0,312	0/0:21,0:21:5.34:0,5,501	0/0:59,3:62:1.01:0,1,1236	0/0:22,0:21:24.06:0,24,329	0/0:23,0:22:36.09:0,36,507	0/0:8,0:17:9:0,9,79	0/1:15,2:17:34.80:35,0,304
chr10	107596001	.	TA	T	100.23	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.816;DP=379;FS=0.000;HRun=9;HaplotypeScore=35.8889;InbreedingCoeff=0.7667;MQ=73.91;MQ0=1;MQRankSum=0.241;QD=12.53;ReadPosRankSum=0.657;VQSLOD=2.0385;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.22:0,84,948	0/0:9,0:9:24.07:0,24,277	0/0:14,1:13:25.68:0,26,303	0/0:7,1:5:8.83:0,9,70	0/0:24,0:25:56.89:0,57,618	0/0:10,0:10:30.08:0,30,338	0/0:10,0:10:27.08:0,27,312	0/0:20,0:20:54.12:0,54,607	0/0:18,0:18:42.12:0,42,485	0/0:11,0:11:33.09:0,33,374	0/0:16,0:16:45.13:0,45,519	1/1:0,8:8:21.01:192,21,0	0/0:14,0:14:42.12:0,42,485	0/0:10,0:10:27.08:0,27,312	0/0:13,0:13:36.10:0,36,407	0/0:16,0:16:45.13:0,45,517	0/0:20,0:20:60.15:0,60,670	0/0:14,0:14:39.08:0,39,435	0/0:12,0:12:33.10:0,33,381	0/0:15,0:15:33.10:0,33,381	0/0:10,0:10:21.05:0,21,232	0/0:4,0:4:12.04:0,12,138	0/0:14,1:15:17.76:0,18,441	0/0:1,0:1:3:0,3,25	0/0:6,0:6:18.05:0,18,208	0/0:18,0:18:48.14:0,48,554	0/0:20,0:20:54.16:0,54,622	0/0:12,0:12:33.10:0,33,381
chr10	107596143	.	GA	G	231.86	PASS	AB=0.946;AC=3;AF=0.054;AN=56;BaseQRankSum=7.073;DP=517;FS=0.000;HRun=11;HaplotypeScore=52.2863;InbreedingCoeff=0.5798;MQ=61.99;MQ0=8;MQRankSum=1.197;QD=4.64;ReadPosRankSum=0.138;VQSLOD=0.4311;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,4:48:15.50:0,15,927	0/0:13,0:13:33.04:0,33,332	0/0:31,0:7:8.05:0,8,63	0/1:33,2:12:1.66:2,0,65	0/0:20,1:22:29.41:0,29,482	0/0:11,0:11:15.03:0,15,153	0/0:14,1:15:8.29:0,8,277	0/0:23,1:24:20.44:0,20,407	0/0:15,1:16:17.46:0,17,385	0/0:15,0:15:24.06:0,24,256	0/0:12,1:14:7.08:0,7,281	1/1:1,13:15:40.99:326,41,0	0/0:9,0:9:24.05:0,24,250	0/0:18,1:19:26.49:0,26,487	0/0:18,0:18:45.11:0,45,480	0/0:12,0:12:21.91:0,22,298	0/0:23,1:26:38.18:0,38,572	0/0:18,0:18:50.16:0,50,517	0/0:17,0:17:36.06:0,36,371	0/0:15,1:16:11.40:0,11,313	0/0:18,0:18:51.11:0,51,535	0/0:10,0:10:27.07:0,27,287	0/0:14,0:14:30.06:0,30,311	0/0:13,0:13:39.03:0,39,394	0/0:11,0:12:13.54:0,14,157	0/0:21,0:21:54.02:0,54,554	0/0:15,1:16:11.36:0,11,312	0/0:16,0:17:32.90:0,33,326
chr10	107597461	.	G	GGT	1331.62	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.674;DP=722;FS=9.604;HRun=0;HaplotypeScore=84.3046;InbreedingCoeff=0.9903;MQ=83.81;MQ0=0;MQRankSum=-0.749;QD=45.92;ReadPosRankSum=0.129;VQSLOD=3.9338;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:69,0:69:99:0,199,2818	0/0:6,0:6:18.06:0,18,258	0/0:25,0:24:69.19:0,69,924	0/0:20,0:20:50.20:0,50,677	0/0:20,0:20:60.20:0,60,857	0/0:14,0:14:39.13:0,39,559	0/0:21,0:21:63.21:0,63,902	0/0:36,0:36:93.30:0,93,1299	0/0:28,0:28:78.22:0,78,1059	0/0:29,0:29:87.29:0,87,1230	0/0:14,0:14:36.12:0,36,515	1/1:1,28:29:78.27:1426,78,0	0/0:22,0:22:63.21:0,63,902	0/0:24,0:24:72.24:0,72,1031	0/0:29,0:28:75.24:0,75,1055	0/0:34,0:34:93.29:0,93,1293	0/0:25,0:25:72.24:0,72,1031	0/0:32,0:32:90.30:0,90,1289	0/0:27,0:27:72.22:0,72,993	0/0:15,0:15:45.15:0,45,644	0/0:72,0:72:99:0,199,2835	0/0:16,0:16:48.15:0,48,667	0/0:15,0:15:42.13:0,42,583	0/0:38,0:38:99:0,111,1588	0/0:9,0:9:27.09:0,27,387	0/0:23,0:23:69.23:0,69,988	0/0:20,0:20:60.20:0,60,858	0/0:10,0:10:30.07:0,30,409
chr10	107597681	.	AT	A	306.32	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.164;DP=592;FS=6.698;HRun=8;HaplotypeScore=58.4843;InbreedingCoeff=0.9828;MQ=74.26;MQ0=0;MQRankSum=-2.434;QD=21.88;ReadPosRankSum=-0.312;VQSLOD=3.8917;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:96.28:0,96,1147	0/0:9,0:9:27.08:0,27,323	0/0:25,0:25:37.44:0,37,635	0/0:15,0:15:33.04:0,33,415	0/0:27,0:27:75.19:0,75,878	0/0:18,0:18:54.17:0,54,652	0/0:20,0:20:57.16:0,57,676	0/0:29,0:29:81.22:0,81,950	0/0:22,0:22:60.18:0,60,725	0/0:26,0:26:69.20:0,69,823	0/0:25,0:25:72.18:0,72,835	1/1:1,13:14:42.06:401,42,0	0/0:25,0:26:75.08:0,75,872	0/0:22,0:22:60.18:0,60,724	0/0:18,0:18:51.14:0,51,604	0/0:13,0:13:33.10:0,33,399	0/0:43,0:43:99:0,123,1444	0/0:24,0:24:66.18:0,66,783	0/0:20,0:19:51.16:0,51,616	0/0:16,0:16:39.12:0,39,471	0/0:19,0:19:51.16:0,51,616	0/0:17,0:17:48.15:0,48,577	0/0:19,0:19:54.16:0,54,643	0/0:18,0:18:51.16:0,51,616	0/0:19,0:19:54.17:0,54,652	0/0:27,0:27:75.22:0,75,897	0/0:18,0:18:51.16:0,51,616	0/0:6,0:6:15.05:0,15,181
chr10	107597737	.	T	TC	838.83	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.205;DP=679;FS=7.789;HRun=0;HaplotypeScore=66.9804;InbreedingCoeff=0.9998;MQ=62.93;MQ0=2;MQRankSum=-1.783;QD=38.13;ReadPosRankSum=1.555;VQSLOD=3.6598;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:99:0,111,1551	0/0:13,0:13:39.12:0,39,529	0/0:27,0:20:60.18:0,60,801	0/0:28,0:24:63.17:0,63,845	0/0:30,0:30:90.30:0,90,1259	0/0:22,0:22:66.22:0,66,923	0/0:29,0:29:84.26:0,84,1143	0/0:23,0:23:60.18:0,60,821	0/0:24,0:24:72.24:0,72,1006	0/0:33,0:33:96.29:0,96,1307	0/0:22,0:22:66.21:0,66,907	1/1:1,21:22:59.94:934,60,0	0/0:22,0:22:66.22:0,66,921	0/0:20,0:20:60.20:0,60,838	0/0:17,0:17:51.16:0,51,698	0/0:13,0:13:39.13:0,39,544	0/0:41,0:41:99:0,117,1631	0/0:33,0:33:96.29:0,96,1320	0/0:13,0:13:39.13:0,39,542	0/0:25,0:25:72.18:0,72,965	0/0:21,0:22:57.19:0,57,797	0/0:25,0:25:72.24:0,72,1005	0/0:19,0:19:54.18:0,54,755	0/0:26,0:26:66.17:0,66,885	0/0:21,0:21:60.19:0,60,823	0/0:32,0:32:96.31:0,96,1328	0/0:19,0:19:57.18:0,57,780	0/0:19,0:19:57.15:0,57,758
chr10	107598326	.	T	TG	185.49	PASS	AB=0.723;AC=1;AF=0.018;AN=56;BaseQRankSum=6.205;DP=720;FS=0.000;HRun=0;HaplotypeScore=79.6450;InbreedingCoeff=-0.0182;MQ=70.67;MQ0=6;MQRankSum=-4.334;QD=5.46;ReadPosRankSum=0.881;VQSLOD=3.0312;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1573	0/0:10,0:10:30.09:0,30,404	0/0:34,0:21:52.12:0,52,602	0/0:33,0:21:46.50:0,47,467	0/0:21,0:20:60.19:0,60,816	0/0:26,0:26:78.17:0,78,1015	0/0:32,0:32:79.96:0,80,1079	0/0:32,0:32:93.29:0,93,1246	0/0:22,0:22:66.18:0,66,885	0/0:33,0:33:90.59:0,91,1240	0/0:16,0:16:48.10:0,48,605	0/1:21,13:34:99:260,0,112	0/0:22,0:22:66.17:0,66,857	0/0:20,0:20:60.15:0,60,801	0/0:25,0:24:75.23:0,75,1017	0/0:28,0:28:84.25:0,84,1127	0/0:37,0:37:99:0,108,1465	0/0:20,0:19:57.13:0,57,755	0/0:17,0:17:48.15:0,48,656	0/0:28,0:28:84.26:0,84,1139	0/0:21,0:21:53.02:0,53,773	0/0:34,0:34:95.98:0,96,1227	0/0:17,0:16:48.15:0,48,654	0/0:33,0:33:92.01:0,92,1277	0/0:15,0:15:45.13:0,45,581	0/0:26,0:26:78.23:0,78,1033	0/0:30,0:30:90.25:0,90,1184	0/0:13,0:13:39.12:0,39,529
chr10	107598327	.	T	TTTTG	790.25	PASS	AB=0.711;AC=1;AF=0.018;AN=56;BaseQRankSum=7.806;DP=726;FS=0.702;HRun=0;HaplotypeScore=127.1025;InbreedingCoeff=-0.0183;MQ=70.50;MQ0=6;MQRankSum=-4.599;QD=24.70;ReadPosRankSum=-1.843;VQSLOD=3.0336;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:82.42:0,82,1737	0/0:10,0:10:27.09:0,27,387	0/0:35,0:22:28.30:0,28,482	0/0:34,0:22:25.28:0,25,420	0/0:21,0:20:60.19:0,60,944	0/0:25,0:25:67.22:0,67,1144	0/0:31,0:31:74.08:0,74,1216	0/0:32,0:32:87.26:0,87,1194	0/0:23,0:23:66.17:0,66,1059	0/0:34,0:34:96.14:0,96,1458	0/0:16,0:16:45.13:0,45,723	0/1:19,13:32:61.24:865,0,61	0/0:21,0:21:60.18:0,60,941	0/0:20,0:20:57.14:0,57,870	0/0:27,0:26:75.23:0,75,1209	0/0:28,0:28:81.24:0,81,1273	0/0:36,0:36:99:0,102,1746	0/0:20,0:19:60.15:0,60,906	0/0:17,0:17:45.04:0,45,670	0/0:29,0:29:84.25:0,84,1234	0/0:20,0:20:60.05:0,60,965	0/0:34,0:34:87.24:0,87,1277	0/0:17,0:16:48.15:0,48,732	0/0:34,0:34:96.13:0,96,1532	0/0:16,0:16:45.13:0,45,667	0/0:28,0:28:72.22:0,72,1062	0/0:29,0:30:84.25:0,84,1246	0/0:14,0:14:39.12:0,39,592
chr10	107599656	.	CA	C	357.67	PASS	AB=0.961;AC=5;AF=0.089;AN=56;BaseQRankSum=5.149;DP=543;FS=0.645;HRun=12;HaplotypeScore=62.3093;InbreedingCoeff=0.3519;MQ=73.91;MQ0=0;MQRankSum=0.965;QD=4.77;ReadPosRankSum=0.958;VQSLOD=1.2198;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,3:32:2.25:0,2,545	0/0:12,0:12:36.06:0,36,361	0/1:17,0:14:5.19:5,0,93	0/0:11,0:11:14.65:0,15,117	0/0:21,2:23:48.06:0,48,472	0/0:16,1:17:18.85:0,19,373	0/0:25,2:28:28.52:0,29,631	0/0:22,1:23:21.85:0,22,403	0/0:18,1:19:15.82:0,16,330	0/0:20,0:20:42.07:0,42,417	0/0:13,0:13:24.05:0,24,242	1/1:3,23:26:56.76:441,57,0	0/0:21,2:23:30.87:0,31,493	0/0:13,0:14:32.89:0,33,313	0/1:15,1:16:2.09:2,0,322	0/0:12,0:12:24.05:0,24,244	0/0:31,0:31:83.97:0,84,828	0/0:26,0:26:71.94:0,72,695	0/0:10,0:13:26.69:0,27,233	0/0:14,0:14:30.06:0,30,304	0/0:20,0:20:51.05:0,51,493	0/1:14,1:16:19.93:20,0,143	0/0:14,0:14:29.84:0,30,281	0/0:21,1:23:30.69:0,31,472	0/0:17,1:18:15.84:0,16,342	0/0:20,0:21:41.91:0,42,405	0/0:24,1:25:15.85:0,16,336	0/0:15,0:15:27.05:0,27,274
chr10	107600586	.	G	GC	3975.15	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-12.295;DP=624;FS=15.623;HRun=6;HaplotypeScore=67.6184;InbreedingCoeff=0.9712;MQ=83.68;MQ0=0;MQRankSum=-1.642;QD=30.34;ReadPosRankSum=-1.865;VQSLOD=1.9698;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.16:0,72,734	0/0:9,0:9:21.04:0,21,214	0/0:14,1:15:5.21:0,5,293	0/0:21,0:21:51.06:0,51,501	0/0:15,0:15:39.08:0,39,398	0/0:11,0:11:30.04:0,30,298	0/0:35,0:35:99:0,99,1000	1/1:3,26:29:72.23:906,72,0	0/0:26,0:26:75.14:0,75,755	0/0:26,0:26:78.17:0,78,791	0/0:14,0:14:36.08:0,36,367	0/0:0,0:29:52.96:0,53,155	0/0:23,0:23:63.14:0,63,643	0/0:19,0:19:57.09:0,57,570	0/0:20,0:20:54.12:0,54,551	0/0:17,0:17:45.07:0,45,446	0/0:34,0:34:96.22:0,96,979	0/0:31,0:31:81.16:0,81,818	1/1:7,14:21:42.11:511,42,0	1/1:4,19:23:54.17:678,54,0	1/1:0,37:37:96.31:1208,96,0	0/0:23,0:23:63.12:0,63,635	0/0:15,0:15:36.08:0,36,366	0/0:24,0:24:54.11:0,54,551	0/0:16,0:16:39.08:0,39,398	0/0:28,0:28:75.16:0,75,760	1/1:2,19:21:54.17:673,54,0	0/0:15,0:15:42.10:0,42,428
chr10	107601798	.	G	GACGGAGATTGGCCTGT	2188.75	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.041;DP=511;FS=2.641;HRun=0;HaplotypeScore=215.2351;InbreedingCoeff=0.9812;MQ=89.15;MQ0=0;MQRankSum=-5.560;QD=136.80;ReadPosRankSum=-0.862;VQSLOD=3.0811;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69:0,69,2332	0/0:7,0:7:21.04:0,21,821	0/0:21,0:21:25.73:0,26,841	0/0:19,0:19:42.53:0,43,1115	0/0:19,0:19:45.15:0,45,1808	0/0:15,0:15:27.07:0,27,956	0/0:30,0:30:78.20:0,78,2955	0/0:16,0:16:33.10:0,33,1217	0/0:18,0:18:46.54:0,47,1736	0/0:14,0:14:33.11:0,33,1400	0/0:9,0:9:24.08:0,24,1029	1/1:7,9:16:32.95:2283,33,0	0/0:16,0:16:42.13:0,42,1736	0/0:15,0:15:39.13:0,39,1608	0/0:17,0:17:48.13:0,48,1865	0/0:15,0:15:39.13:0,39,1699	0/0:37,0:37:90.23:0,90,3238	0/0:30,0:30:84.20:0,84,3235	0/0:16,0:16:36.11:0,36,1061	0/0:10,0:10:18.05:0,18,663	0/0:18,0:18:42.14:0,42,1847	0/0:9,0:9:27.08:0,27,1098	0/0:14,0:14:39.11:0,39,1494	0/0:29,0:29:75.21:0,75,2890	0/0:13,0:13:33.05:0,33,1185	0/0:23,0:23:51.17:0,51,2065	0/0:26,0:26:60.07:0,60,2507	0/0:13,0:13:36.12:0,36,1427
chr10	107602460	.	G	GTGTGTGTGTG	451	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.520;DP=780;FS=0.919;HRun=0;HaplotypeScore=218.4191;InbreedingCoeff=0.8120;MQ=56.58;MQ0=7;MQRankSum=-3.886;QD=10.25;ReadPosRankSum=-2.331;VQSLOD=2.3050;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:57.13:0,57,1511	1/1:8,4:13:5.69:264,6,0	0/0:36,0:12:2.59:0,3,47	0/0:44,0:20:10.06:0,10,197	0/0:23,0:23:39.09:0,39,1043	0/0:19,0:19:27.09:0,27,794	0/0:40,0:40:77.33:0,77,2095	0/0:33,0:33:14.36:0,14,689	0/0:34,0:34:57.19:0,57,1536	0/0:32,0:32:49.16:0,49,1439	0/0:24,0:24:48.13:0,48,1200	1/1:31,0:31:27.24:298,27,0	0/0:22,0:22:48.16:0,48,1361	0/0:26,0:26:48.10:0,48,1283	0/0:23,0:23:45.15:0,45,1352	0/0:29,0:29:48.16:0,48,1371	0/0:22,0:22:24.16:0,24,1171	0/0:33,0:33:48.16:0,48,1306	0/0:15,0:14:14.36:0,14,876	0/0:21,0:21:48.12:0,48,1312	0/0:84,0:84:99:0,135,3782	0/0:21,0:21:27.09:0,27,768	0/0:11,0:11:21.05:0,21,548	0/0:40,0:39:84.03:0,84,2351	0/0:16,0:15:30.10:0,30,897	0/0:23,0:23:30.09:0,30,765	0/0:18,0:18:36.12:0,36,1031	0/0:12,0:12:27.09:0,27,726
chr10	107604994	.	GT	G	800.39	PASS	AB=0.971;AC=16;AF=0.286;AN=56;BaseQRankSum=5.358;DP=514;FS=8.974;HRun=13;HaplotypeScore=60.6046;InbreedingCoeff=0.6526;MQ=71.68;MQ0=7;MQRankSum=-0.332;QD=6.67;ReadPosRankSum=0.588;VQSLOD=1.6725;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,99,934	1/1:2,0:2:0.47:1,0,0	0/0:32,0:17:5.42:0,5,95	0/1:15,1:9:0.88:1,0,18	0/0:13,0:13:18.01:0,18,167	0/0:14,1:15:5.14:0,5,211	0/0:31,1:32:48.45:0,48,586	1/1:4,13:17:36.60:257,37,0	0/0:17,0:17:13.62:0,14,269	0/0:17,0:17:26.97:0,27,249	0/0:12,0:12:30:0,30,274	1/1:21,0:21:14.18:72,14,0	0/0:19,0:19:41.92:0,42,369	0/0:19,1:20:32.15:0,32,455	0/0:11,1:12:7.71:0,8,204	0/0:12,0:12:21.03:0,21,204	0/0:25,5:30:0.31:0,0,465	0/0:22,1:26:28.85:0,29,396	1/1:4,11:15:31.15:205,31,0	1/1:2,10:13:0.49:143,0,0	1/1:5,11:16:1.81:149,2,0	0/0:14,0:14:30.05:0,30,291	0/0:12,0:12:29.99:0,30,276	0/0:33,0:34:52.55:0,53,607	0/0:17,0:17:30.05:0,30,292	0/0:14,1:15:8.12:0,8,232	1/1:7,8:15:17.81:131,18,0	0/1:5,0:5:2.95:3,0,50
chr10	107607108	.	GT	G	120.15	PASS	AB=0.896;AC=4;AF=0.071;AN=56;BaseQRankSum=3.766;DP=598;FS=0.000;HRun=15;HaplotypeScore=74.5223;InbreedingCoeff=0.3760;MQ=63.41;MQ0=3;MQRankSum=1.690;QD=2.40;ReadPosRankSum=0.457;VQSLOD=-0.7219;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,2:45:79.11:0,79,778	0/0:8,0:8:9:0,9,79	0/0:15,0:8:5.02:0,5,19	0/0:8,0:5:0.09:0,0,5	0/0:25,0:29:51.26:0,51,396	0/0:16,0:20:35.51:0,36,285	0/0:15,0:19:38.43:0,38,292	0/0:24,1:29:19.17:0,19,269	0/1:18,2:20:5.52:6,0,196	0/0:31,1:33:30.24:0,30,466	0/0:23,1:28:37.29:0,37,408	1/1:2,13:15:32.47:210,32,0	0/0:14,1:16:10.70:0,11,209	0/0:16,1:18:16.52:0,17,251	0/0:16,0:16:26.99:0,27,237	0/0:21,3:24:9.20:0,9,309	0/0:20,2:22:18:0,18,382	0/0:20,1:21:22.60:0,23,312	0/1:13,2:15:11.55:12,0,155	0/0:17,2:20:6.24:0,6,278	0/0:10,0:14:19.82:0,20,175	0/0:21,0:21:27.39:0,27,223	0/0:16,0:17:29.81:0,30,243	0/0:21,0:22:39.43:0,39,335	0/0:21,5:25:12.47:0,12,355	0/0:28,1:30:49.50:0,50,534	0/0:27,0:27:59.44:0,59,469	0/0:16,1:18:25.57:0,26,338
chr10	107608614	.	G	GC	717.70	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.924;DP=624;FS=2.990;HRun=3;HaplotypeScore=59.6592;InbreedingCoeff=0.9657;MQ=66.25;MQ0=3;MQRankSum=-1.318;QD=31.20;ReadPosRankSum=1.775;VQSLOD=3.6025;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,1705	1/1:0,7:7:18.06:249,18,0	0/0:13,0:11:24.54:0,25,286	0/0:18,0:15:39.04:0,39,419	0/0:17,0:17:45.14:0,45,540	0/0:20,0:20:57.16:0,57,672	0/0:20,0:20:45.14:0,45,540	0/0:33,0:33:87.26:0,87,1035	0/0:20,0:20:60.18:0,60,720	0/0:28,0:28:78.23:0,78,927	0/0:15,0:15:45.14:0,45,540	1/1:0,16:16:42.14:588,42,0	0/0:17,0:17:51.16:0,51,612	0/0:19,0:19:54.15:0,54,637	0/0:22,0:22:63.19:0,63,756	0/0:25,0:25:69.20:0,69,817	0/0:29,0:29:84.23:0,84,992	0/0:26,0:26:69.21:0,69,828	0/0:22,0:21:57.16:0,57,673	0/0:22,0:21:54.15:0,54,636	0/0:47,0:47:99:0,117,1404	0/0:15,0:15:42.13:0,42,504	0/0:18,0:18:51.16:0,51,612	0/0:35,0:35:99:0,102,1223	0/0:16,0:16:45.14:0,45,540	0/0:29,0:29:87.27:0,87,1044	0/0:22,0:22:60.18:0,60,720	0/0:3,0:3:9.03:0,9,108
chr10	107609534	.	AT	A	1049.05	PASS	AB=0.607;AC=11;AF=0.204;AN=54;BaseQRankSum=5.076;DP=398;FS=12.235;HRun=9;HaplotypeScore=39.9761;InbreedingCoeff=0.7454;MQ=59.92;MQ0=22;MQRankSum=-0.729;QD=14.18;ReadPosRankSum=-0.790;VQSLOD=1.6052;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.08:0,60,654	1/1:3,0:3:8.98:74,9,0	0/0:39,0:11:25.75:0,26,162	0/0:48,1:10:6.72:0,7,72	0/0:14,0:14:36.09:0,36,405	0/0:14,0:14:30.05:0,30,331	0/0:5,0:5:11.94:0,12,98	1/1:5,18:22:14.95:441,15,0	0/0:3,0:2:3.01:0,3,35	0/0:12,0:11:30.08:0,30,336	0/0:14,0:14:39.01:0,39,431	0/0:7,0:7:15.02:0,15,153	0/0:3,0:3:5.98:0,6,54	0/0:5,0:5:12.04:0,12,138	0/0:5,0:3:6.02:0,6,69	0/0:8,0:6:9.03:0,9,104	0/0:32,0:30:81.13:0,81,891	0/0:32,0:29:75.19:0,75,841	0/1:6,11:15:1.96:241,0,2	1/1:2,9:11:23.89:196,24,0	1/1:2,3:4:9:82,9,0	./.	0/0:2,0:2:6.02:0,6,69	0/0:6,0:6:18.05:0,18,208	0/0:13,0:13:33.10:0,33,381	0/0:12,0:12:33.10:0,33,381	1/1:6,9:14:7.08:175,7,0	0/0:24,0:24:69.16:0,69,781
chr10	107613478	.	A	AT	3542.15	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-11.159;DP=589;FS=1.851;HRun=7;HaplotypeScore=55.5967;InbreedingCoeff=0.9948;MQ=69.13;MQ0=1;MQRankSum=-0.313;QD=27.67;ReadPosRankSum=-2.799;VQSLOD=3.2590;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.09:0,60,579	1/1:1,6:6:15.05:181,15,0	0/0:15,0:11:24.65:0,25,187	0/0:15,0:15:19.68:0,20,169	0/0:34,0:34:93.13:0,93,892	0/0:22,0:22:63.10:0,63,608	0/0:19,0:19:45.05:0,45,428	1/1:4,17:20:48.13:566,48,0	0/0:16,0:16:48.08:0,48,463	0/0:25,0:25:66.07:0,66,622	0/0:30,0:30:87.11:0,87,829	1/1:3,11:14:27.08:326,27,0	0/0:27,0:27:75.09:0,75,716	0/0:19,0:19:51.06:0,51,487	0/0:26,0:26:75.10:0,75,719	0/0:18,0:18:51.08:0,51,492	0/0:22,0:22:63.07:0,63,601	0/0:21,0:21:54.08:0,54,521	1/1:2,17:19:45.10:516,45,0	1/1:2,15:17:36.11:435,36,0	1/1:3,19:22:51.16:615,51,0	0/0:27,0:27:78.13:0,78,753	0/0:23,0:23:54.08:0,54,521	0/0:21,0:21:54.08:0,54,521	0/0:22,0:22:63.10:0,63,608	0/0:28,0:28:69.11:0,69,666	1/1:3,25:27:75.23:903,75,0	0/0:9,0:9:20.96:0,21,186
chr10	107614326	.	CCATTCATTCATT	C	3796.97	PASS	AB=0.667;AC=9;AF=0.161;AN=56;BaseQRankSum=9.348;DP=808;FS=25.401;HRun=0;HaplotypeScore=271.9749;InbreedingCoeff=0.8721;MQ=57.61;MQ0=2;MQRankSum=-7.620;QD=26.37;ReadPosRankSum=1.390;VQSLOD=1.6498;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:80.30:0,80,4169	0/0:11,0:11:33.11:0,33,1822	0/0:21,0:18:24.07:0,24,1197	0/0:20,0:15:23.75:0,24,938	0/0:18,0:18:42.62:0,43,2473	0/0:29,0:29:78.25:0,78,4054	0/0:38,0:38:84.20:0,84,3823	1/1:24,9:33:27.05:636,27,0	0/0:38,0:38:90.31:0,90,5050	0/0:48,0:48:96.33:0,96,5345	0/0:13,0:13:27.09:0,27,1446	0/0:12,0:33:75.25:0,75,1803	0/0:42,0:42:99:0,117,6273	0/0:31,0:31:66.23:0,66,3781	0/0:49,0:49:99:0,123,6435	0/0:35,0:35:78.27:0,78,4327	0/0:31,0:31:72.25:0,72,3849	0/0:9,0:9:18.06:0,18,952	1/1:17,6:23:18.06:635,18,0	1/1:7,16:23:12.04:423,12,0	0/1:18,18:35:8.30:290,0,8	0/0:36,0:36:96.32:0,96,5232	0/0:19,0:19:51.16:0,51,2755	0/0:35,0:35:90.30:0,90,4926	0/0:21,0:22:54.19:0,54,2989	0/0:36,0:36:90.30:0,90,4704	1/1:8,21:29:54.02:1813,54,0	0/0:18,0:18:45.15:0,45,2595
chr10	107615697	.	A	ACCTGTTG	4160.44	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.249;DP=616;FS=2.230;HRun=0;HaplotypeScore=141.0711;InbreedingCoeff=0.9950;MQ=82.36;MQ0=0;MQRankSum=-9.879;QD=109.49;ReadPosRankSum=1.074;VQSLOD=5.6854;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,2973	0/0:7,0:7:21.03:0,21,505	0/0:19,0:19:48.16:0,48,1226	0/0:18,0:18:45.11:0,45,1100	0/0:22,0:22:63.20:0,63,1578	0/0:20,0:20:57.20:0,57,1508	0/0:26,0:26:75.26:0,75,1941	0/0:24,0:24:69.22:0,69,1653	0/0:23,0:23:69.24:0,69,1859	0/0:20,0:20:60.21:0,60,1573	0/0:14,0:14:39.12:0,39,996	1/1:6,29:38:99:4160,105,0	0/0:28,0:28:81.25:0,81,2016	0/0:33,0:33:96.33:0,96,2587	0/0:23,0:23:63.22:0,63,1659	0/0:18,0:18:51.16:0,51,1319	0/0:33,0:33:99:0,99,2611	0/0:33,0:33:99:0,99,2485	0/0:15,0:15:39.12:0,39,925	0/0:13,0:13:36.12:0,36,940	0/0:32,0:32:93.32:0,93,2475	0/0:19,0:19:48.16:0,48,1262	0/0:18,0:18:51.15:0,51,1250	0/0:20,0:20:57.18:0,57,1470	0/0:16,0:16:45.15:0,45,1182	0/0:20,0:20:60.21:0,60,1564	0/0:16,0:16:36.12:0,36,959	0/0:10,0:10:30.10:0,30,801
chr10	107616515	.	AGT	A	196.44	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.894;DP=865;FS=3.357;HRun=0;HaplotypeScore=109.2053;InbreedingCoeff=0.9409;MQ=75.34;MQ0=0;MQRankSum=-0.399;QD=19.64;ReadPosRankSum=0.408;VQSLOD=3.7588;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,144,2532	1/1:2,8:10:21.07:289,21,0	0/0:23,0:20:38.68:0,39,558	0/0:27,0:26:32.45:0,32,428	0/0:22,0:22:66.21:0,66,1135	0/0:18,0:18:51.17:0,51,905	0/0:26,0:26:78.25:0,78,1340	0/0:32,0:32:90.31:0,90,1580	0/0:38,0:38:99:0,108,1915	0/0:46,0:46:99:0,126,2217	0/0:15,0:15:45.15:0,45,799	0/0:39,0:39:90.31:0,90,1580	0/0:36,0:36:99:0,105,1862	0/0:41,0:41:99:0,114,1988	0/0:41,0:41:99:0,114,1973	0/0:45,0:45:99:0,126,2214	0/0:28,0:28:81.26:0,81,1395	0/0:22,0:22:57.20:0,57,1001	0/0:27,0:27:69.19:0,69,1163	0/0:28,0:28:78.27:0,78,1375	0/0:68,0:68:99:0,180,3177	0/0:24,0:24:63.20:0,63,1084	0/0:27,0:27:72.25:0,72,1268	0/0:34,0:34:96.33:0,96,1704	0/0:27,0:27:78.27:0,78,1374	0/0:37,0:37:99:0,105,1833	0/0:29,0:29:75.26:0,75,1318	0/0:3,0:3:9.03:0,9,160
chr10	107616643	.	T	TAC	9476.94	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-10.904;DP=1199;FS=4.889;HRun=0;HaplotypeScore=162.8891;InbreedingCoeff=0.9737;MQ=51.50;MQ0=40;MQRankSum=1.650;QD=27.47;ReadPosRankSum=2.064;VQSLOD=5.7149;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,108,1401	1/1:8,10:18:39.12:626,39,0	0/0:69,0:15:4.12:0,4,232	0/0:66,0:22:43.07:0,43,543	0/0:38,0:37:96.21:0,96,1233	0/0:21,0:21:60.19:0,60,779	0/0:45,0:45:91.18:0,91,1169	1/1:31,33:45:33.75:1365,34,0	0/0:65,0:63:99:0,154,1946	0/0:48,0:47:99:0,102,1289	0/0:16,0:16:42.12:0,42,530	1/1:8,32:40:66.10:1083,66,0	0/0:46,0:45:99:0,111,1379	0/0:45,0:45:99:0,111,1438	0/0:51,0:50:99:0,135,1710	0/0:36,0:36:90.25:0,90,1136	0/0:42,0:42:99:0,102,1289	0/0:28,0:28:43.80:0,44,621	1/1:20,13:20:48.11:754,48,0	1/1:4,27:31:63.13:1051,63,0	1/1:21,100:121:99:3214,190,0	0/0:26,0:25:69.21:0,69,882	0/0:23,0:23:56.85:0,57,710	0/0:58,0:58:99:0,126,1579	0/0:14,0:14:39.11:0,39,491	0/0:46,0:42:99:0,108,1358	1/1:6,26:32:84.27:1384,84,0	0/0:21,0:20:57.19:0,57,741
chr10	107616687	.	CAT	C	873.97	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.898;DP=1177;FS=0.639;HRun=0;HaplotypeScore=188.8510;InbreedingCoeff=0.9988;MQ=53.27;MQ0=37;MQRankSum=-7.599;QD=21.32;ReadPosRankSum=-3.037;VQSLOD=3.3840;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,2306	0/0:16,0:16:30.10:0,30,543	0/0:69,0:14:29.76:0,30,407	0/0:70,0:19:50.98:0,51,831	0/0:34,0:34:90:0,90,1586	0/0:20,0:20:57.15:0,57,987	0/0:49,0:49:99:0,132,2156	0/0:71,0:50:99:0,141,2117	0/0:55,0:55:99:0,153,2504	0/0:46,0:45:99:0,120,2043	0/0:18,0:18:50.74:0,51,946	1/1:5,36:41:80.44:969,80,0	0/0:43,0:42:93.11:0,93,1982	0/0:45,0:45:99:0,121,2285	0/0:52,0:52:99:0,156,2574	0/0:44,0:44:99:0,129,2308	0/0:42,0:42:99:0,100,2017	0/0:29,0:28:83.38:0,83,1338	0/0:36,0:26:69.01:0,69,1153	0/0:29,0:28:81.24:0,81,1452	0/0:100,0:97:99:0,212,3504	0/0:25,0:25:75.22:0,75,1382	0/0:29,0:29:81.07:0,81,1331	0/0:60,0:59:99:0,159,2791	0/0:19,0:18:54.11:0,54,866	0/0:43,0:41:99:0,116,2078	0/0:34,0:32:40.11:0,40,1066	0/0:14,0:13:36.09:0,36,654
chr10	107616702	.	CACACATACACACACAT	C	1308.81	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.497;DP=1215;FS=12.494;HRun=0;HaplotypeScore=467.2425;InbreedingCoeff=0.9952;MQ=52.12;MQ0=45;MQRankSum=-7.163;QD=24.24;ReadPosRankSum=-1.261;VQSLOD=-0.2095;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,111,5364	1/1:16,0:16:20.72:430,21,0	0/0:78,0:17:36.12:0,36,800	0/0:87,0:24:37:0,37,906	0/0:38,0:38:78.27:0,78,3826	0/0:20,0:20:48.16:0,48,1820	0/0:41,0:41:90.18:0,90,3358	0/0:78,0:58:99:0,99,3072	0/0:56,0:56:99:0,120,6017	0/0:47,0:45:96.32:0,96,4771	0/0:20,0:20:53.40:0,53,2877	1/1:28,10:38:29.90:999,30,0	0/0:40,0:39:98.69:0,99,4454	0/0:48,0:48:99:0,123,6622	0/0:51,0:51:99:0,138,6939	0/0:45,0:45:99:0,117,6451	0/0:39,0:39:90.29:0,90,3594	0/0:33,0:32:74.95:0,75,3976	0/0:41,0:29:57.20:0,57,2528	0/0:33,0:32:63.22:0,63,3203	0/0:94,0:91:99:0,141,7153	0/0:24,0:24:60.21:0,60,3174	0/0:29,0:29:63.22:0,63,3093	0/0:60,0:59:99:0,125,6204	0/0:21,0:21:51.18:0,51,3005	0/0:49,0:47:76.13:0,76,4502	0/0:31,0:29:58.06:0,58,2529	0/0:10,0:9:21.07:0,21,756
chr10	107616708	.	TACACACACATACACATAC	T	916.41	PASS	AB=0.974;AC=3;AF=0.054;AN=56;BaseQRankSum=7.698;DP=1225;FS=7.680;HRun=0;HaplotypeScore=507.2750;InbreedingCoeff=0.6459;MQ=51.32;MQ0=53;MQRankSum=-5.320;QD=17.29;ReadPosRankSum=-1.774;VQSLOD=-0.3295;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,117,6729	1/1:3,12:16:27.09:787,27,0	0/0:77,0:16:45.15:0,45,1170	0/0:93,0:25:59:0,59,1685	0/0:37,0:37:96.18:0,96,4759	0/0:21,0:21:57.17:0,57,2406	0/0:42,0:42:99:0,108,4826	0/0:80,0:59:99:0,139,5116	0/0:58,0:58:99:0,147,7719	0/0:45,0:43:99:0,114,6138	0/0:20,0:20:54.66:0,55,3528	0/1:36,0:37:63.51:235,0,64	0/0:42,0:41:99:0,111,5720	0/0:48,0:48:99:0,132,8037	0/0:55,0:55:99:0,160,8862	0/0:46,0:45:99:0,129,8016	0/0:39,0:39:99:0,108,4886	0/0:33,0:32:89.07:0,89,4831	0/0:43,0:31:81.28:0,81,3759	0/0:32,0:30:72.23:0,72,3884	0/0:89,0:86:99:0,168,8961	0/0:22,0:22:63.22:0,63,3868	0/0:30,0:30:78.25:0,78,4055	0/0:62,0:61:99:0,147,8045	0/0:22,0:22:63.22:0,63,3698	0/0:47,0:45:99:0,126,6023	0/0:31,0:29:61.07:0,61,3109	0/0:10,0:9:24.08:0,24,1011
chr10	107616721	.	A	ACG	278.36	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=7.744;DP=1217;FS=15.621;HRun=0;HaplotypeScore=183.4849;InbreedingCoeff=0.6446;MQ=51.74;MQ0=48;MQRankSum=-5.936;QD=5.35;ReadPosRankSum=-1.487;VQSLOD=2.0830;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,135,2042	0/1:14,0:14:27.90:28,0,41	0/0:84,0:20:60.11:0,60,812	0/0:93,0:26:69.95:0,70,1049	0/0:33,0:33:90.26:0,90,1309	0/0:21,0:21:57.19:0,57,871	0/0:43,0:43:99:0,114,1697	0/0:76,0:58:99:0,162,2401	0/0:55,0:55:99:0,142,2111	0/0:50,0:49:99:0,129,1825	0/0:21,0:21:55.74:0,56,829	1/1:32,6:38:22.37:355,22,0	0/0:45,0:44:99:0,113,1733	0/0:45,0:45:99:0,132,1996	0/0:59,0:59:99:0,169,2506	0/0:51,0:50:99:0,141,2132	0/0:42,0:42:99:0,117,1740	0/0:32,0:31:88.52:0,89,1278	0/0:43,0:31:90.25:0,90,1325	0/0:27,0:25:63.21:0,63,962	0/0:81,0:78:99:0,165,2487	0/0:24,0:24:72.23:0,72,1081	0/0:27,0:27:72.24:0,72,1102	0/0:56,0:55:99:0,140,2092	0/0:22,0:22:66.21:0,66,989	0/0:44,0:43:99:0,125,1808	0/0:31,0:29:71.75:0,72,984	0/0:10,0:9:24.08:0,24,365
chr10	107616756	.	AAC	A	3097	PASS	AB=0.778;AC=9;AF=0.161;AN=56;BaseQRankSum=8.409;DP=978;FS=9.843;HRun=0;HaplotypeScore=161.2268;InbreedingCoeff=0.8466;MQ=57.67;MQ0=12;MQRankSum=-0.794;QD=16.39;ReadPosRankSum=-1.047;VQSLOD=2.6615;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:37:78.25:0,78,1222	0/0:16,0:16:24.08:0,24,368	0/0:42,1:15:15.88:0,16,176	0/0:42,0:15:1.98:0,2,133	0/0:28,0:28:66.23:0,66,1079	0/0:17,0:17:48.13:0,48,734	0/0:35,1:36:46.97:0,47,1248	0/1:25,9:30:6.04:297,0,6	0/0:53,2:55:61.50:0,62,1990	0/0:51,1:52:85.82:0,86,1460	0/0:25,0:25:47.80:0,48,576	0/0:37,0:37:65.67:0,66,784	0/0:38,0:38:96.12:0,96,1475	0/0:40,0:40:99:0,99,1591	0/0:54,1:55:98.22:0,98,2066	0/0:45,0:45:74.75:0,75,1252	0/0:31,0:31:81.23:0,81,1249	0/0:25,0:25:60.09:0,60,864	1/1:22,11:32:65.24:683,65,0	1/1:12,8:20:40.46:383,40,0	1/1:37,29:65:99:1322,116,0	0/0:24,0:24:55.22:0,55,755	0/0:29,0:29:63.21:0,63,1011	0/0:45,0:44:99:0,102,1547	0/0:24,0:24:43.47:0,43,955	0/0:35,0:35:79.34:0,79,897	1/1:25,10:34:64.42:576,64,0	0/0:10,0:10:23.99:0,24,268
chr10	107616770	.	C	CGG	3770.24	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=9.813;DP=896;FS=10.046;HRun=0;HaplotypeScore=162.1030;InbreedingCoeff=0.8532;MQ=58.98;MQ0=19;MQRankSum=-0.677;QD=22.85;ReadPosRankSum=0.207;VQSLOD=4.0745;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.30:0,87,1402	0/0:16,0:16:33.10:0,33,500	0/0:27,0:7:14.03:0,14,148	0/0:25,0:6:10.57:0,11,162	0/0:28,0:28:78.23:0,78,1233	0/0:21,0:20:34.21:0,34,824	0/0:33,0:33:79.88:0,80,1421	0/1:22,0:17:63:126,0,63	0/0:55,0:55:99:0,134,2348	0/0:45,0:45:99:0,127,2020	0/0:20,0:20:48.16:0,48,749	0/0:38,0:38:66.22:0,66,1017	0/0:36,0:36:99:0,105,1615	0/0:36,0:36:99:0,108,1716	0/0:54,0:54:99:0,153,2391	0/0:35,0:36:93.24:0,93,1415	0/0:33,0:33:93.27:0,93,1444	0/0:25,0:25:72.67:0,73,1086	1/1:15,14:27:51.18:740,51,0	1/1:11,6:17:42.31:429,42,0	1/1:53,10:62:99:1520,109,0	0/0:23,0:23:32.66:0,33,642	0/0:26,0:26:69.03:0,69,1109	0/0:46,0:45:99:0,120,1849	0/0:25,0:25:66.21:0,66,1028	0/0:41,0:41:99:0,112,1576	1/1:15,18:33:69.64:955,70,0	0/0:12,0:12:30.10:0,30,452
chr10	107616772	.	CGGAA	C	3561.77	PASS	AB=0.968;AC=13;AF=0.250;AN=52;BaseQRankSum=4.903;DP=865;FS=2.061;HRun=0;HaplotypeScore=175.4459;InbreedingCoeff=0.8545;MQ=59.08;MQ0=18;MQRankSum=0.979;QD=16.41;ReadPosRankSum=1.025;VQSLOD=3.1879;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:48.15:0,48,959	0/0:15,0:15:2.26:0,2,374	./.	./.	0/1:29,1:30:4.56:5,0,775	0/0:20,0:19:37.37:0,37,781	0/0:33,0:33:35.95:0,36,666	0/0:20,0:17:12.01:0,12,133	0/0:55,0:55:87.28:0,87,1877	1/1:19,24:43:45.72:1015,46,0	1/1:7,13:20:21:298,21,0	1/1:15,23:38:27.09:420,27,0	0/0:33,0:33:48.16:0,48,1047	0/0:37,1:38:7.47:0,7,1105	0/0:53,1:54:43.60:0,44,1835	1/1:23,11:34:21.07:324,21,0	0/0:32,0:32:56.98:0,57,1172	0/0:23,0:23:30.10:0,30,677	0/0:29,0:27:36.56:0,37,599	0/0:16,0:16:21.06:0,21,357	0/0:58,0:57:86.55:0,87,1325	0/0:14,0:25:31.62:0,32,425	0/0:26,0:26:24.08:0,24,557	0/0:41,1:41:10.48:0,10,1165	0/0:25,0:25:36.12:0,36,763	1/1:14,24:39:80.67:1181,81,0	0/0:29,0:28:51.07:0,51,780	1/1:5,8:13:21.07:318,21,0
chr10	107617186	.	GC	G	5422.28	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.981;DP=692;FS=5.013;HRun=5;HaplotypeScore=69.5849;InbreedingCoeff=0.9998;MQ=92.37;MQ0=0;MQRankSum=-3.669;QD=30.63;ReadPosRankSum=-0.984;VQSLOD=5.1205;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.29:0,90,1212	1/1:0,12:12:36.10:406,36,0	0/0:26,0:26:69.16:0,69,861	0/0:33,0:33:90.24:0,90,1149	0/0:23,0:23:66.21:0,66,885	0/0:22,0:22:60.20:0,60,820	0/0:31,0:31:84.23:0,84,1113	1/1:1,26:27:78.22:884,78,0	0/0:28,0:28:81.24:0,81,1071	0/0:20,0:20:45.14:0,45,600	0/0:16,0:16:48.14:0,48,625	1/1:1,28:29:81.19:904,81,0	0/0:20,0:20:55.43:0,55,741	0/0:27,0:27:81.26:0,81,1090	0/0:31,0:31:90.29:0,90,1214	0/0:28,0:28:75.21:0,75,964	0/0:26,0:26:72.24:0,72,983	0/0:23,0:23:63.13:0,63,806	1/1:4,22:26:63.14:693,63,0	1/1:1,26:27:75.17:834,75,0	1/1:1,30:31:84.24:952,84,0	0/0:29,0:29:87.27:0,87,1167	0/0:12,0:12:27.08:0,27,352	0/0:23,0:23:66.21:0,66,885	0/0:17,0:17:48.14:0,48,637	0/0:25,0:25:75.22:0,75,993	1/1:0,25:25:66.19:748,66,0	0/0:25,0:25:75.25:0,75,1025
chr10	107617956	.	T	TCC	838.11	PASS	AB=0.910;AC=10;AF=0.179;AN=56;BaseQRankSum=9.087;DP=395;FS=185.505;HRun=2;HaplotypeScore=198.0469;InbreedingCoeff=-0.2418;MQ=80.47;MQ0=3;MQRankSum=-7.104;QD=5.41;ReadPosRankSum=1.087;VQSLOD=-0.1052;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,8:22:99:410,0,434	0/1:4,0:4:7.95:8,0,79	0/0:22,0:15:27.19:0,27,348	0/1:39,0:29:39.11:39,0,264	0/0:9,0:9:2.99:0,3,128	0/1:10,2:12:99:129,0,238	0/1:13,1:14:99:102,0,299	0/0:13,0:13:30.10:0,30,439	0/0:14,0:14:39.34:0,39,542	0/0:16,0:16:20.79:0,21,397	0/0:7,0:7:14.40:0,14,214	0/1:18,0:18:16.17:16,0,449	0/0:15,0:15:31.46:0,31,423	0/0:18,0:18:30.79:0,31,444	0/1:14,1:14:24.86:25,0,332	0/0:14,0:14:33.05:0,33,417	0/1:9,1:10:66.36:66,0,232	0/1:12,2:14:99:137,0,319	0/0:5,0:5:14.79:0,15,187	0/0:7,0:7:18.96:0,19,180	0/0:36,1:38:90.25:0,90,1238	0/0:11,0:11:18.85:0,19,260	0/0:6,0:7:7.03:0,7,94	0/0:13,0:13:33.02:0,33,417	0/0:15,0:15:2.77:0,3,367	0/1:5,1:6:46.52:47,0,109	0/0:13,0:13:21.74:0,22,279	0/0:3,0:3:9.03:0,9,133
chr10	107618021	.	T	TG	289.13	PASS	AB=0.778;AC=10;AF=0.185;AN=54;BaseQRankSum=5.614;DP=135;FS=110.503;HRun=0;HaplotypeScore=39.7216;InbreedingCoeff=-0.3043;MQ=76.70;MQ0=0;MQRankSum=-4.907;QD=5.78;ReadPosRankSum=4.558;VQSLOD=-0.1009;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:12.04:0,12,168	0/0:1,0:1:3.01:0,3,42	0/0:17,0:15:32.98:0,33,286	0/0:16,0:8:8.40:0,8,48	0/0:2,0:2:3.01:0,3,42	0/1:4,1:5:29.22:29,0,152	0/0:3,0:3:9.03:0,9,125	0/0:9,0:9:21.07:0,21,293	0/0:4,0:4:12.04:0,12,168	0/1:2,2:4:71.82:77,0,72	0/0:2,0:2:3.01:0,3,42	0/1:6,1:7:19.77:20,0,189	0/1:2,1:3:32.62:33,0,75	0/1:5,1:6:24.95:25,0,153	0/0:4,0:4:12.04:0,12,167	0/1:3,1:4:30.02:30,0,82	0/0:1,0:1:3.01:0,3,41	./.	0/0:5,0:5:12.03:0,12,151	0/0:3,0:3:9.03:0,9,126	0/0:6,0:6:12.04:0,12,168	0/1:6,1:7:50.96:51,0,188	0/0:2,1:3:6.02:0,6,84	0/0:3,0:3:9.03:0,9,125	0/1:4,2:6:21.87:22,0,134	0/1:3,1:4:35.19:35,0,113	0/1:1,3:4:29.90:104,0,30	0/0:1,0:1:3.01:0,3,42
chr10	107618023	.	A	ACTTTC	858.58	PASS	AB=0.792;AC=11;AF=0.204;AN=54;BaseQRankSum=5.845;DP=124;FS=78.152;HRun=0;HaplotypeScore=45.4956;InbreedingCoeff=-0.3324;MQ=78.45;MQ0=0;MQRankSum=-3.809;QD=13.42;ReadPosRankSum=3.172;VQSLOD=-0.4178;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:12.04:0,12,277	0/0:1,0:1:3.01:0,3,70	0/1:16,0:14:2.03:2,0,318	0/0:12,0:6:6.93:0,7,67	0/0:2,0:2:3.01:0,3,70	0/1:3,1:4:79.45:79,0,198	0/0:2,0:2:6.02:0,6,125	0/0:8,0:8:18.05:0,18,376	0/0:4,0:4:12.04:0,12,279	0/1:2,2:4:79.60:177,0,80	0/0:2,0:2:3.01:0,3,45	0/1:6,1:7:26.89:27,0,287	0/1:2,1:3:78.36:78,0,130	0/1:5,1:6:69.09:69,0,264	0/0:3,0:3:9.03:0,9,208	0/1:3,1:4:78.78:79,0,132	0/0:1,0:1:3.01:0,3,69	./.	0/0:4,0:4:9.03:0,9,208	0/0:3,0:3:9.03:0,9,210	0/0:6,0:6:12.04:0,12,278	0/1:6,1:7:99:107,0,314	0/0:2,1:3:6.02:0,6,140	0/0:3,0:3:9.03:0,9,205	0/1:3,1:5:31.32:31,0,196	0/1:3,1:4:83.09:83,0,197	0/1:1,3:4:57.86:262,0,58	0/0:1,0:1:2.99:0,3,24
chr10	107618873	.	TTTTTTCC	T	212.07	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.594;DP=599;FS=1.168;HRun=0;HaplotypeScore=147.8215;InbreedingCoeff=0.9044;MQ=70.66;MQ0=9;MQRankSum=-3.333;QD=11.78;ReadPosRankSum=0.410;VQSLOD=2.3839;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:83.29:0,83,2281	0/0:6,0:6:18.06:0,18,618	0/0:72,0:27:57.92:0,58,916	0/0:55,0:18:42.70:0,43,528	0/0:9,0:9:27.09:0,27,824	0/0:17,0:17:51.15:0,51,1087	0/0:9,0:9:23.95:0,24,706	0/0:26,0:26:69.73:0,70,1248	0/0:10,0:10:25.86:0,26,550	0/0:21,0:21:60.17:0,60,1492	0/0:14,0:14:42.08:0,42,942	1/1:10,8:18:7.93:294,8,0	0/0:9,0:9:25.64:0,26,659	0/0:10,0:10:30.10:0,30,1031	0/0:7,0:7:21.06:0,21,555	0/0:14,0:14:36.11:0,36,1004	0/0:40,0:40:99:0,111,3247	0/0:24,0:24:60.19:0,60,1453	0/0:30,0:30:76.86:0,77,1381	0/0:14,0:14:42.04:0,42,657	0/0:24,0:24:69.17:0,69,1263	0/0:17,0:17:51.17:0,51,1379	0/0:11,0:11:33.11:0,33,1004	0/0:18,0:18:48.59:0,49,1371	0/0:25,0:25:75.24:0,75,2129	0/0:27,0:27:81.26:0,81,2087	0/0:17,0:17:42.45:0,42,675	0/0:18,0:17:51.17:0,51,1170
chr10	107620137	.	AG	A	1040.94	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.037;DP=713;FS=0.000;HRun=6;HaplotypeScore=69.1104;InbreedingCoeff=0.9957;MQ=78.05;MQ0=0;MQRankSum=-0.631;QD=27.39;ReadPosRankSum=1.064;VQSLOD=4.1135;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1428	1/1:1,6:7:18.04:193,18,0	0/0:29,0:29:78.19:0,78,955	0/0:26,0:25:67.10:0,67,856	0/0:22,0:22:60.19:0,60,786	0/0:26,0:25:75.24:0,75,980	0/0:23,0:23:57.19:0,57,750	0/0:27,0:27:72.22:0,72,934	0/0:33,0:33:84.27:0,84,1105	0/0:29,0:29:72.22:0,72,923	0/0:15,0:15:45.15:0,45,592	1/1:1,30:31:90.23:967,90,0	0/0:25,0:25:69.22:0,69,904	0/0:18,0:18:48.16:0,48,631	0/0:24,0:24:72.23:0,72,947	0/0:22,0:22:54.18:0,54,711	0/0:32,0:32:90.29:0,90,1184	0/0:25,0:25:63.17:0,63,810	0/0:19,0:19:54.15:0,54,681	0/0:19,0:19:45.13:0,45,577	0/0:53,0:53:99:0,153,1997	0/0:32,0:32:90.26:0,90,1146	0/0:17,0:17:51.17:0,51,670	0/0:32,0:32:93.28:0,93,1194	0/0:18,0:18:54.18:0,54,710	0/0:39,0:39:99:0,114,1475	0/0:17,0:17:48.13:0,48,604	0/0:15,0:15:36.12:0,36,473
chr10	107620267	.	C	CACA	1501.21	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.712;DP=764;FS=1.572;HRun=0;HaplotypeScore=127.4588;InbreedingCoeff=0.9019;MQ=69.43;MQ0=3;MQRankSum=-1.469;QD=38.49;ReadPosRankSum=1.992;VQSLOD=4.8351;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,150,2636	1/1:4,0:5:2.92:17,3,0	0/0:44,0:37:79.78:0,80,1391	0/0:28,0:19:40.54:0,41,534	0/0:18,0:18:54.17:0,54,909	0/0:18,0:18:48.15:0,48,819	0/0:32,0:32:96.25:0,96,1555	0/0:19,0:19:48.13:0,48,716	0/0:21,0:21:60.17:0,60,990	0/0:23,0:23:60.20:0,60,1059	0/0:15,0:15:42.14:0,42,753	1/1:1,30:34:69.34:1591,69,0	0/0:21,0:21:63.21:0,63,1151	0/0:21,0:21:60.20:0,60,1079	0/0:25,0:25:72.23:0,72,1230	0/0:24,0:24:72.24:0,72,1231	0/0:41,0:41:71.47:0,71,1818	0/0:29,0:29:84.28:0,84,1472	0/0:26,0:26:69.41:0,69,1000	0/0:16,0:16:42.13:0,42,731	0/0:97,0:97:99:0,255,4644	0/0:20,0:20:60.21:0,60,1098	0/0:19,0:19:54.16:0,54,865	0/0:33,0:33:99:0,99,1727	0/0:17,0:17:51.17:0,51,903	0/0:27,0:27:81.26:0,81,1404	0/0:23,0:23:63.19:0,63,1047	0/0:14,0:14:39.12:0,39,598
chr10	107622328	.	GA	G	1200.93	PASS	AB=0.822;AC=11;AF=0.196;AN=56;BaseQRankSum=7.917;DP=519;FS=12.559;HRun=11;HaplotypeScore=55.4136;InbreedingCoeff=0.7038;MQ=53.30;MQ0=12;MQRankSum=-1.650;QD=11.02;ReadPosRankSum=-2.360;VQSLOD=0.8804;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:92.20:0,92,943	0/0:8,0:8:18.04:0,18,191	0/0:5,0:3:0.47:0,0,1	0/1:6,1:3:16.28:16,0,18	0/0:25,1:26:26.31:0,26,455	0/0:10,0:10:27.06:0,27,281	0/0:19,0:18:42.09:0,42,439	1/1:4,16:19:47.90:387,48,0	0/0:14,0:15:14.24:0,14,332	0/0:21,0:20:47.79:0,48,474	0/0:20,1:21:20.38:0,20,398	0/0:13,0:13:27.07:0,27,286	0/1:11,1:10:2.86:3,0,155	0/0:15,1:16:17.28:0,17,361	0/0:13,0:13:27.07:0,27,284	0/0:16,0:16:42.10:0,42,444	0/0:26,0:26:69.14:0,69,719	0/0:20,2:22:7.84:0,8,481	0/1:9,9:16:1.57:192,0,2	1/1:3,15:15:29.94:246,30,0	1/1:4,10:14:29:228,29,0	0/0:17,1:18:17.46:0,17,391	0/0:24,1:26:38.20:0,38,427	0/0:23,0:23:51.13:0,51,544	0/0:26,1:27:38.48:0,38,593	0/0:19,0:19:51.09:0,51,531	1/1:1,18:19:35.90:295,36,0	0/0:12,1:13:11.45:0,11,327
chr10	107623267	.	G	GA	1078.91	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.143;DP=580;FS=12.178;HRun=0;HaplotypeScore=58.6444;InbreedingCoeff=0.9950;MQ=91.07;MQ0=0;MQRankSum=-3.719;QD=34.80;ReadPosRankSum=1.411;VQSLOD=2.1363;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1696	1/1:1,7:8:18.06:288,18,0	0/0:22,0:22:62.23:0,62,819	0/0:24,0:24:69.19:0,69,900	0/0:13,0:13:33.11:0,33,461	0/0:17,0:17:51.17:0,51,712	0/0:26,0:26:75.20:0,75,995	0/0:37,0:37:99:0,105,1424	0/0:17,0:17:51.13:0,51,675	0/0:19,0:19:54.18:0,54,755	0/0:11,0:11:33.11:0,33,460	1/1:1,22:23:57.19:911,57,0	0/0:17,0:17:48.16:0,48,670	0/0:21,0:21:63.19:0,63,862	0/0:28,0:28:84.28:0,84,1172	0/0:16,0:16:45.14:0,45,612	0/0:28,0:29:57.37:0,57,1085	0/0:14,0:14:42.14:0,42,587	0/0:19,0:19:51.16:0,51,696	0/0:15,0:15:45.14:0,45,609	0/0:34,0:34:99:0,99,1384	0/0:13,0:13:39.13:0,39,545	0/0:11,0:11:30.09:0,30,401	0/0:26,0:26:75.25:0,75,1049	0/0:19,0:19:51.17:0,51,710	0/0:32,0:32:96.23:0,96,1282	0/0:18,0:17:48.16:0,48,671	0/0:10,0:10:30.10:0,30,419
chr10	107623789	.	C	CT	467.11	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.452;DP=528;FS=2.131;HRun=3;HaplotypeScore=52.0712;InbreedingCoeff=0.9916;MQ=75.00;MQ0=0;MQRankSum=-1.173;QD=25.95;ReadPosRankSum=0.551;VQSLOD=2.7699;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:78.18:0,78,888	1/1:0,8:8:21.07:294,21,0	0/0:12,0:12:35.72:0,36,294	0/0:15,0:15:19.18:0,19,246	0/0:21,0:21:53.97:0,54,623	0/0:13,0:13:36.11:0,36,431	0/0:18,0:18:54.16:0,54,635	0/0:24,0:23:66.13:0,66,705	0/0:13,0:13:33.06:0,33,351	0/0:25,0:25:72.16:0,72,813	0/0:32,0:32:96.27:0,96,1122	1/1:0,10:10:21.07:293,21,0	0/0:12,0:12:33.06:0,33,359	0/0:15,0:15:42.08:0,42,460	0/0:18,0:18:54.15:0,54,627	0/0:13,0:13:39.10:0,39,445	0/0:36,0:35:96.25:0,96,1122	0/0:29,0:29:81.25:0,81,969	0/0:23,0:23:60.15:0,60,688	0/0:26,0:26:75.18:0,75,854	0/0:9,0:9:27.07:0,27,312	0/0:15,0:15:39.10:0,39,454	0/0:16,0:16:42.10:0,42,475	0/0:24,0:24:72.18:0,72,826	0/0:17,0:17:42.09:0,42,470	0/0:17,0:17:48.15:0,48,575	0/0:20,0:19:51.14:0,51,599	0/0:19,0:19:54.09:0,54,615
chr10	107624048	.	A	AAATGAATG	4661.39	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=4.792;DP=574;FS=1.115;HRun=0;HaplotypeScore=140.8242;InbreedingCoeff=0.9331;MQ=69.08;MQ0=2;MQRankSum=-7.165;QD=30.27;ReadPosRankSum=-5.700;VQSLOD=2.8196;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:60.86:0,61,1588	1/1:8,3:12:9.03:356,9,0	0/0:18,0:14:2.98:0,3,22	0/0:18,0:16:12.04:0,12,254	0/0:21,0:21:30.09:0,30,653	0/0:32,0:32:63.22:0,63,1547	0/0:17,0:17:36.11:0,36,780	1/1:35,0:34:51.12:1374,51,0	0/0:15,0:15:27.08:0,27,567	0/0:19,0:19:51.13:0,51,1166	0/0:25,0:25:45.15:0,45,1120	1/1:4,0:21:35.95:296,36,0	0/0:12,0:12:18.05:0,18,403	0/0:21,0:21:51.18:0,51,1259	0/0:15,0:15:30.10:0,30,676	0/0:11,0:11:24.08:0,24,597	0/0:31,0:31:63.20:0,63,1529	0/0:19,0:19:30.06:0,30,659	1/1:8,2:11:12.01:380,12,0	1/1:19,6:26:30.99:961,31,0	1/1:7,4:13:9.03:289,9,0	0/0:24,0:24:51.15:0,51,1154	0/0:22,0:22:45.14:0,45,1068	0/0:16,0:16:42.14:0,42,1029	0/0:15,0:15:24.07:0,24,557	0/0:21,0:21:39.13:0,39,967	1/1:21,6:35:27.09:1004,27,0	0/0:14,0:14:27.09:0,27,673
chr10	107624383	.	G	GA	500.57	PASS	AB=0.855;AC=5;AF=0.089;AN=56;BaseQRankSum=-1.297;DP=582;FS=10.802;HRun=10;HaplotypeScore=63.4942;InbreedingCoeff=0.3437;MQ=74.64;MQ0=0;MQRankSum=0.065;QD=6.10;ReadPosRankSum=1.459;VQSLOD=0.5200;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:34:79.85:0,80,642	0/1:6,6:12:6.60:142,0,7	0/1:12,0:13:22.02:22,0,80	0/0:10,0:11:8.72:0,9,61	0/0:16,1:17:0.96:0,1,214	0/0:26,0:26:68.90:0,69,563	0/0:15,0:17:46:0,46,353	0/0:25,0:25:62.90:0,63,515	0/0:16,0:16:44.95:0,45,369	0/0:24,0:24:41.91:0,42,343	0/0:11,0:12:29:0,29,228	1/1:2,20:22:42.11:448,42,0	0/0:17,0:17:38.95:0,39,319	0/0:20,0:20:38.93:0,39,320	0/0:30,0:30:68.89:0,69,566	0/0:18,0:18:9.96:0,10,288	0/0:25,1:26:24.92:0,25,411	0/0:17,0:19:48.99:0,49,381	0/0:29,1:30:27.84:0,28,426	0/0:21,0:21:53.92:0,54,443	0/1:31,4:35:9.12:9,0,547	0/0:13,0:14:34.99:0,35,277	0/0:22,0:21:19.22:0,19,313	0/0:19,0:19:41.86:0,42,339	0/0:14,0:15:37.97:0,38,299	0/0:29,0:29:53.84:0,54,433	0/0:27,0:27:59.89:0,60,492	0/0:11,0:11:26.95:0,27,222
chr10	107625274	.	GA	G	253.11	PASS	AB=0.850;AC=6;AF=0.107;AN=56;BaseQRankSum=4.297;DP=547;FS=0.000;HRun=11;HaplotypeScore=67.5344;InbreedingCoeff=0.2608;MQ=69.12;MQ0=0;MQRankSum=1.143;QD=3.56;ReadPosRankSum=0.080;VQSLOD=-0.2576;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,4:37:65.54:0,66,884	1/1:1,4:5:11.98:99,12,0	0/1:18,2:14:40.71:41,0,45	0/1:14,1:15:22.34:22,0,86	0/0:14,1:16:11.74:0,12,304	0/0:19,0:20:47.95:0,48,494	0/0:21,0:22:59.97:0,60,613	0/0:29,0:30:41.67:0,42,583	0/0:19,1:20:23.48:0,23,455	0/0:17,0:18:38.93:0,39,398	0/0:15,0:16:35.95:0,36,362	0/1:5,9:14:19.14:210,0,19	0/0:8,0:8:18.05:0,18,192	0/0:21,2:24:44.34:0,44,646	0/0:21,0:21:51.12:0,51,537	0/0:21,1:22:32.47:0,32,539	0/0:37,0:39:95.80:0,96,971	0/0:26,0:26:57.08:0,57,587	0/0:14,0:16:29.73:0,30,276	0/0:10,0:11:23.93:0,24,239	0/0:25,0:28:69.01:0,69,716	0/0:7,0:7:15.04:0,15,160	0/0:10,0:11:21.36:0,21,207	0/0:19,0:22:50.63:0,51,491	0/1:16,1:16:0.60:1,0,187	0/0:27,2:30:38.34:0,38,591	0/0:19,0:19:42.11:0,42,448	0/0:12,1:13:11.42:0,11,312
chr10	107625539	.	GT	G	2068.26	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=8.718;DP=490;FS=0.435;HRun=9;HaplotypeScore=50.3726;InbreedingCoeff=0.7863;MQ=70.42;MQ0=6;MQRankSum=1.984;QD=13.17;ReadPosRankSum=-2.135;VQSLOD=2.5687;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.24:0,87,991	0/1:8,0:8:5.67:6,0,39	0/1:45,0:19:22.99:23,0,137	0/0:20,0:7:14.74:0,15,112	0/0:22,0:23:53.95:0,54,572	0/0:16,0:16:45.05:0,45,493	0/0:15,0:15:39.09:0,39,432	1/1:3,27:30:80.85:698,81,0	0/0:6,0:6:15.04:0,15,173	0/0:8,0:8:18.05:0,18,207	0/0:17,0:17:47.97:0,48,499	0/0:15,0:15:36.87:0,37,147	0/0:14,0:14:36.08:0,36,394	0/0:12,0:12:24.05:0,24,257	0/0:15,0:15:42.11:0,42,474	0/0:13,0:13:39.09:0,39,430	0/0:24,0:24:69.16:0,69,764	0/0:30,0:30:81.66:0,82,869	1/1:5,20:25:62.84:552,63,0	1/1:0,15:15:41.95:367,42,0	1/1:0,5:5:9:82,9,0	0/0:7,0:7:21.06:0,21,240	0/0:14,0:14:36.08:0,36,395	0/0:14,0:14:42.09:0,42,463	0/0:13,0:13:36.06:0,36,383	0/0:15,0:15:33.08:0,33,366	1/1:5,24:29:57.01:517,57,0	0/0:12,0:12:36.10:0,36,411
chr10	107626252	.	G	GTGAA	7977.22	PASS	AB=0.705;AC=12;AF=0.214;AN=56;BaseQRankSum=-2.101;DP=933;FS=8.663;HRun=0;HaplotypeScore=156.3993;InbreedingCoeff=0.7661;MQ=73.97;MQ0=1;MQRankSum=-2.146;QD=36.10;ReadPosRankSum=-2.445;VQSLOD=4.2482;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,129,2031	1/1:7,9:19:33.54:728,34,0	0/0:27,0:27:18.03:0,18,234	0/0:29,0:29:26.92:0,27,377	0/0:27,0:27:60.20:0,60,956	0/0:28,0:28:69.15:0,69,1049	0/0:35,0:35:66.19:0,66,1029	0/1:21,7:27:19.06:484,0,19	0/0:36,0:36:81.28:0,81,1319	0/0:48,0:49:99:0,105,1664	0/0:16,0:16:30.09:0,30,465	0/1:13,22:36:47.14:994,0,47	0/0:38,1:40:17.09:0,17,1288	0/0:41,0:41:99:0,99,1561	0/0:41,0:41:99:0,99,1613	0/0:55,0:55:99:0,135,2007	0/0:22,0:25:60.14:0,60,864	0/0:26,0:26:51.17:0,51,828	1/1:15,8:23:7.27:918,7,0	1/1:9,15:26:41.94:723,42,0	1/1:15,47:64:99:2933,125,0	0/0:45,0:45:90.25:0,90,1372	0/0:31,0:31:69.22:0,69,1094	0/0:44,0:44:99:0,111,1816	0/0:20,0:20:51.16:0,51,805	0/0:40,0:40:54.40:0,54,1379	1/1:9,14:23:51.17:1198,51,0	0/0:7,0:8:21.06:0,21,323
chr10	107626369	.	G	GTGGATGGATGGA	3558.02	PASS	AB=0.911;AC=15;AF=0.268;AN=56;BaseQRankSum=7.440;DP=1107;FS=35.064;HRun=0;HaplotypeScore=344.1624;InbreedingCoeff=0.7450;MQ=51.36;MQ0=58;MQRankSum=-8.788;QD=10.11;ReadPosRankSum=-6.839;VQSLOD=0.5460;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:57.20:0,57,1710	0/1:7,0:11:2.74:38,0,3	0/1:72,0:12:2.76:3,0,35	0/0:83,0:13:2.99:0,3,23	0/0:28,0:28:45.15:0,45,1228	0/0:32,0:32:48.12:0,48,1282	0/0:31,0:31:66.21:0,66,1838	1/1:50,0:49:47.32:716,47,0	0/0:46,0:46:78.27:0,78,2244	0/0:43,0:43:56.21:0,56,1616	0/0:19,0:19:24.08:0,24,507	1/1:24,0:28:36.12:708,36,0	0/0:50,0:50:44.32:0,44,2398	0/0:45,0:45:69.22:0,69,2176	0/0:43,0:44:81.27:0,81,2416	0/0:53,0:52:99:0,99,3098	0/0:45,0:45:66.36:0,66,2857	0/1:44,0:48:24.47:24,0,2001	1/1:20,0:16:24.08:665,24,0	1/1:31,0:31:32.14:695,32,0	1/1:55,1:53:28.35:467,28,0	0/0:29,0:27:52.41:0,52,1329	0/0:16,0:15:23.87:0,24,657	0/0:41,0:41:65.95:0,66,1907	0/0:37,0:37:41.71:0,42,1623	0/0:52,0:52:78.26:0,78,2147	1/1:14,16:34:6.91:241,7,0	0/0:17,0:17:30.10:0,30,915
chr10	107626512	.	G	GTGGATGGA	1429.80	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.141;DP=1064;FS=15.533;HRun=0;HaplotypeScore=261.1659;InbreedingCoeff=0.9639;MQ=58.61;MQ0=34;MQRankSum=-3.828;QD=22.70;ReadPosRankSum=-0.905;VQSLOD=1.4133;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:39:64.97:0,65,1662	1/1:8,0:25:41.43:354,41,0	0/0:70,0:15:9.02:0,9,191	0/0:74,0:32:30.05:0,30,568	0/0:27,0:27:57.17:0,57,1272	0/0:32,0:32:57.13:0,57,1248	0/0:24,0:24:33.11:0,33,837	0/0:47,0:47:63.20:0,63,1379	0/0:45,0:45:92.27:0,92,2132	0/0:48,0:47:87.30:0,87,2162	0/0:20,0:18:21.07:0,21,525	1/1:16,19:37:29.69:1197,30,0	0/0:36,0:36:84.22:0,84,2013	0/0:44,0:44:93.32:0,93,2311	0/0:39,0:39:81.28:0,81,2021	0/0:44,0:44:87.25:0,87,2071	0/0:41,0:42:47.31:0,47,1461	0/0:28,0:29:56.27:0,56,1305	0/0:31,0:24:36.12:0,36,881	0/0:22,0:22:30.09:0,30,661	0/0:87,0:85:99:0,100,3060	0/0:42,0:42:96.31:0,96,2284	0/0:27,0:27:51.12:0,51,1205	0/0:34,0:33:60.16:0,60,1400	0/0:27,0:27:45.13:0,45,1041	0/0:35,0:35:84.19:0,84,1910	0/0:26,0:25:57.18:0,57,1313	0/0:6,0:6:18.06:0,18,453
chr10	107633492	.	CA	C	561.89	PASS	AB=0.861;AC=16;AF=0.286;AN=56;BaseQRankSum=3.492;DP=435;FS=1.232;HRun=15;HaplotypeScore=54.8822;InbreedingCoeff=0.3968;MQ=64.83;MQ0=2;MQRankSum=-0.325;QD=3.43;ReadPosRankSum=1.426;VQSLOD=-0.4310;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:33:40.52:0,41,449	1/1:3,5:8:11.80:77,12,0	0/0:17,0:6:6.21:0,6,37	0/1:15,0:10:3.27:3,0,48	0/0:19,2:22:0.73:0,1,226	0/1:15,1:15:13.78:14,0,120	0/1:12,2:14:8.61:9,0,167	1/1:10,12:26:11.16:168,11,0	0/0:14,0:14:20.96:0,21,170	0/0:22,0:22:23.99:0,24,209	0/0:8,0:8:20.87:0,21,171	0/0:15,1:16:7.53:0,8,166	0/0:14,0:14:16.71:0,17,118	0/0:8,0:9:17.18:0,17,127	0/0:10,0:10:17.81:0,18,134	0/0:11,0:12:26.83:0,27,220	0/0:22,1:25:31.32:0,31,355	0/0:27,0:29:33.59:0,34,269	0/1:7,9:16:20.23:140,0,20	1/1:7,4:12:9.41:59,9,0	1/1:6,2:8:8.67:56,9,0	0/0:2,0:2:5.96:0,6,45	0/1:8,1:9:4.30:4,0,84	0/0:11,2:13:4.71:0,5,159	0/0:8,0:8:14.97:0,15,125	0/0:17,0:16:35.97:0,36,307	1/1:9,10:19:26.92:174,27,0	0/1:17,3:20:30.08:30,0,121
chr10	107634807	.	T	TG	381.48	PASS	AB=0.795;AC=10;AF=0.185;AN=54;BaseQRankSum=-0.159;DP=471;FS=2.682;HRun=9;HaplotypeScore=55.8018;InbreedingCoeff=0.6197;MQ=59.37;MQ0=22;MQRankSum=-0.776;QD=4.95;ReadPosRankSum=-0.485;VQSLOD=0.1957;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:65.40:0,65,497	1/1:4,0:4:2.55:17,3,0	0/0:27,0:12:10.12:0,10,66	0/0:14,0:3:2.87:0,3,15	0/0:16,0:15:26.69:0,27,194	0/0:15,0:15:32.90:0,33,274	0/0:19,0:17:35.68:0,36,276	1/1:9,11:19:26.71:226,27,0	0/0:14,0:13:23.96:0,24,200	0/0:25,0:25:46.17:0,46,412	0/0:15,0:14:20.85:0,21,224	0/0:1,0:2:2.04:0,2,6	0/0:16,0:13:32.42:0,32,228	0/0:15,0:14:38.43:0,38,280	0/0:11,0:11:17.91:0,18,147	0/0:14,0:14:35.82:0,36,288	0/0:43,0:42:74.03:0,74,578	0/0:25,0:25:46.89:0,47,439	1/1:7,5:10:14.92:135,15,0	./.	1/1:5,7:12:2.84:31,3,0	0/0:16,0:16:32.84:0,33,268	0/0:15,0:13:6.86:0,7,123	0/0:11,0:11:29.76:0,30,229	0/1:15,0:15:7.26:41,0,7	0/0:23,0:21:50.73:0,51,407	0/1:4,7:13:4.77:79,0,5	0/0:11,0:11:13.76:0,14,154
chr10	107635665	.	G	GC	631.78	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.422;DP=677;FS=0.807;HRun=8;HaplotypeScore=68.9477;InbreedingCoeff=0.9921;MQ=68.51;MQ0=0;MQRankSum=-2.034;QD=27.47;ReadPosRankSum=0.503;VQSLOD=4.1789;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,1098	0/0:7,0:7:21:0,21,187	0/0:11,0:11:22.81:0,23,193	0/0:21,0:21:29.93:0,30,319	0/0:22,0:22:61.28:0,61,552	0/0:22,0:22:60.01:0,60,544	0/0:22,0:22:57.01:0,57,517	0/0:26,1:27:46.39:0,46,665	0/0:26,0:27:62.05:0,62,555	0/0:29,0:29:78.02:0,78,711	0/0:30,0:30:81.03:0,81,737	1/1:1,22:23:63.19:727,63,0	0/0:20,0:20:51.02:0,51,467	0/0:23,0:23:57.01:0,57,522	0/0:26,0:26:69.04:0,69,632	0/0:20,0:20:57.03:0,57,522	0/0:40,0:40:99:0,105,954	0/0:24,0:24:63.03:0,63,577	0/0:18,0:18:42.01:0,42,384	0/0:27,0:27:75.03:0,75,686	0/0:36,0:36:93.03:0,93,849	0/0:32,0:32:87.02:0,87,790	0/0:17,0:17:39.01:0,39,357	0/0:28,0:28:72.02:0,72,659	0/0:18,0:18:45.01:0,45,411	0/0:26,0:26:72.04:0,72,659	0/0:27,0:27:75.04:0,75,686	0/0:11,0:11:30.02:0,30,275
chr10	107635821	.	TATGATGTAGA	T	1015.12	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.618;DP=696;FS=15.257;HRun=0;HaplotypeScore=202.2020;InbreedingCoeff=0.9989;MQ=85.06;MQ0=0;MQRankSum=-5.538;QD=84.59;ReadPosRankSum=0.910;VQSLOD=2.6223;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,6271	0/0:10,0:10:30.10:0,30,1436	0/0:31,0:31:93.32:0,93,4597	0/0:31,0:31:93.31:0,93,4359	0/0:14,0:14:39.13:0,39,2097	0/0:19,0:19:54.17:0,54,2673	0/0:29,0:29:81.28:0,81,4143	0/0:24,0:24:72.25:0,72,3777	0/0:40,0:40:99:0,114,5878	0/0:20,0:20:60.20:0,60,3031	0/0:13,0:13:39.13:0,39,1920	1/1:0,12:12:33.11:1110,33,0	0/0:25,0:25:75.26:0,75,4018	0/0:30,0:30:87.30:0,87,4529	0/0:38,0:38:99:0,111,5736	0/0:24,0:24:72.25:0,72,3785	0/0:33,0:33:99:0,99,5123	0/0:23,0:23:69.24:0,69,3633	0/0:17,0:17:51.18:0,51,2637	0/0:13,0:13:39.13:0,39,2105	0/0:40,0:40:99:0,120,6145	0/0:20,0:20:57.18:0,57,2842	0/0:15,0:15:45.15:0,45,2414	0/0:47,0:47:99:0,138,7180	0/0:12,0:12:36.12:0,36,1929	0/0:27,0:27:81.28:0,81,4224	0/0:29,0:29:87.28:0,87,4289	0/0:15,0:15:45.15:0,45,2249
chr10	107636100	.	AC	A	3598.89	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.414;DP=564;FS=17.963;HRun=1;HaplotypeScore=67.9478;InbreedingCoeff=0.9964;MQ=62.61;MQ0=4;MQRankSum=-1.877;QD=30.50;ReadPosRankSum=-2.297;VQSLOD=1.7045;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,116,1477	1/1:0,11:11:27.02:374,27,0	0/0:20,0:16:31.36:0,31,465	0/0:15,0:11:33.06:0,33,399	0/0:16,1:17:51.04:0,51,656	0/0:18,0:18:47.70:0,48,607	0/0:28,0:27:77.96:0,78,947	1/1:2,20:22:35.13:699,35,0	0/0:13,0:12:32.19:0,32,450	0/0:23,0:23:62.29:0,62,758	0/0:14,0:14:42.09:0,42,527	1/1:6,0:6:15.92:68,16,0	0/0:14,0:14:42.04:0,42,524	0/0:10,0:10:30.07:0,30,391	0/0:22,0:22:58.89:0,59,752	0/0:19,0:19:54.17:0,54,730	0/0:30,0:29:87.29:0,87,1183	0/0:32,0:32:89.04:0,89,1126	1/1:1,24:24:69.09:856,69,0	1/1:0,20:20:50.98:601,51,0	1/1:0,10:10:21.07:293,21,0	0/0:27,0:26:75.25:0,75,1021	0/0:23,0:23:63.50:0,64,748	0/0:22,0:21:57.13:0,57,753	0/0:13,0:13:38.25:0,38,431	0/0:32,0:32:96.21:0,96,1265	1/1:1,23:24:53.93:707,54,0	0/0:14,0:14:39.13:0,39,536
chr10	107636104	.	A	AC	153.79	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.370;DP=566;FS=0.000;HRun=0;HaplotypeScore=80.7343;InbreedingCoeff=0.9860;MQ=63.89;MQ0=0;MQRankSum=-3.053;QD=25.63;ReadPosRankSum=1.446;VQSLOD=4.5556;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,1721	0/0:11,0:11:26.98:0,27,237	0/0:19,0:16:41.68:0,42,498	0/0:13,0:12:36.10:0,36,485	0/0:16,0:16:48.15:0,48,655	0/0:18,0:18:54.16:0,54,709	0/0:28,0:28:81.15:0,81,1038	0/0:21,0:21:59.97:0,60,540	0/0:14,0:14:42.11:0,42,538	0/0:23,0:23:69.18:0,69,873	0/0:15,0:15:42.14:0,42,576	1/1:1,5:6:18.06:244,18,0	0/0:15,0:15:45.13:0,45,586	0/0:11,0:11:30.10:0,30,419	0/0:23,0:23:66.17:0,66,871	0/0:20,0:20:57.17:0,57,765	0/0:30,0:29:87.28:0,87,1191	0/0:31,0:31:87.21:0,87,1125	0/0:26,0:25:65.79:0,66,566	0/0:18,0:18:50.80:0,51,411	0/0:9,0:9:21.02:0,21,194	0/0:29,0:29:81.26:0,81,1102	0/0:21,0:21:59.82:0,60,785	0/0:22,0:21:57.13:0,57,756	0/0:14,0:14:39.05:0,39,491	0/0:32,0:32:96.30:0,96,1297	0/0:24,0:24:55.96:0,56,468	0/0:14,0:14:39.13:0,39,545
chr10	107636785	.	G	GC	174.79	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=4.839;DP=685;FS=5.432;HRun=1;HaplotypeScore=67.3518;InbreedingCoeff=0.6412;MQ=54.63;MQ0=3;MQRankSum=-4.597;QD=4.48;ReadPosRankSum=0.229;VQSLOD=0.3935;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,111,1436	0/0:5,0:5:15.05:0,15,194	0/0:23,0:11:33.10:0,33,416	0/0:24,0:19:57.14:0,57,690	0/0:17,0:17:51.17:0,51,660	0/0:22,0:22:63.18:0,63,801	0/0:38,0:38:99:0,108,1397	0/0:23,0:22:66.15:0,66,805	0/0:26,0:26:75.24:0,75,972	0/0:30,0:30:81.26:0,81,1040	0/0:17,0:17:48.16:0,48,623	1/1:2,8:8:18.06:261,18,0	0/0:19,0:19:57.19:0,57,740	0/0:22,0:22:63.20:0,63,817	0/0:30,0:30:90.29:0,90,1169	0/0:30,0:30:87.28:0,87,1129	0/0:29,0:28:78.23:0,78,997	0/1:29,0:29:14.51:15,0,819	0/0:19,0:19:57.19:0,57,740	0/0:16,0:16:48.16:0,48,623	0/0:61,0:61:99:0,172,2219	0/0:23,0:23:69.22:0,69,884	0/0:15,0:15:42.14:0,42,545	0/0:29,0:29:75.24:0,75,969	0/0:28,0:28:72.22:0,72,921	0/0:30,0:29:84.26:0,84,1078	0/0:14,0:13:36.12:0,36,467	0/0:11,0:11:33.11:0,33,428
chr10	107636965	.	A	AG	781.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.767;DP=822;FS=16.994;HRun=0;HaplotypeScore=84.1440;InbreedingCoeff=0.9990;MQ=71.78;MQ0=1;MQRankSum=-5.998;QD=35.54;ReadPosRankSum=0.502;VQSLOD=2.0360;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,1915	0/0:9,0:9:27.09:0,27,370	0/0:22,0:19:45.08:0,45,567	0/0:26,0:25:60.07:0,60,761	0/0:35,0:35:99:0,105,1465	0/0:22,0:22:66.21:0,66,907	0/0:35,0:35:99:0,99,1288	0/0:29,0:29:87.26:0,87,1168	0/0:38,0:38:99:0,108,1484	0/0:37,0:37:99:0,108,1431	0/0:16,0:16:48.16:0,48,671	1/1:2,20:20:57.14:877,57,0	0/0:32,0:32:96.29:0,96,1301	0/0:31,0:31:93.30:0,93,1282	0/0:29,0:29:84.26:0,84,1155	0/0:26,0:26:75.25:0,75,1048	0/0:31,0:32:87.29:0,87,1216	0/0:30,0:30:84.21:0,84,1110	0/0:25,0:25:75.17:0,75,993	0/0:28,0:28:78.26:0,78,1081	0/0:35,0:35:99:0,99,1311	0/0:37,0:37:99:0,105,1444	0/0:33,0:33:99:0,99,1368	0/0:34,0:34:96.30:0,96,1322	0/0:23,0:23:69.23:0,69,964	0/0:42,0:42:99:0,126,1702	0/0:24,0:24:66.19:0,66,886	0/0:22,0:22:66.22:0,66,920
chr10	107636982	.	G	GT	757.49	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.239;DP=809;FS=25.929;HRun=0;HaplotypeScore=81.0094;InbreedingCoeff=0.9980;MQ=76.23;MQ0=0;MQRankSum=-4.663;QD=26.12;ReadPosRankSum=-1.390;VQSLOD=2.0338;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,1950	0/0:9,0:9:24.05:0,24,314	0/0:22,0:22:60.08:0,60,812	0/0:25,0:25:72.16:0,72,929	0/0:33,0:33:93.31:0,93,1298	0/0:20,0:20:60.19:0,60,824	0/0:33,0:33:99:0,99,1377	0/0:29,0:29:84.24:0,84,1108	0/0:35,0:35:99:0,99,1383	0/0:32,0:32:93.30:0,93,1286	0/0:22,0:22:60.16:0,60,817	1/1:5,23:27:60.15:852,60,0	0/0:37,0:37:99:0,105,1427	0/0:32,0:32:96.32:0,96,1338	0/0:34,0:34:96.24:0,96,1270	0/0:23,0:23:66.22:0,66,923	0/0:30,0:30:87.29:0,87,1212	0/0:25,0:25:72.24:0,72,1001	0/0:30,0:30:87.26:0,87,1176	0/0:25,0:25:75.24:0,75,1027	0/0:35,0:35:99:0,105,1447	0/0:37,0:37:98.14:0,98,1347	0/0:30,0:30:90.30:0,90,1246	0/0:31,0:31:90.24:0,90,1219	0/0:21,0:21:63.21:0,63,881	0/0:37,0:37:99:0,108,1492	0/0:23,0:23:63.21:0,63,880	0/0:22,0:22:66.22:0,66,923
chr10	107638699	.	GTGCCTTGGGTTGCCAGGCC	G	555.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.407;DP=644;FS=8.478;HRun=0;HaplotypeScore=310.4745;InbreedingCoeff=0.9539;MQ=78.18;MQ0=0;MQRankSum=-3.443;QD=79.38;ReadPosRankSum=2.289;VQSLOD=2.1038;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.30:0,96,8188	1/1:2,5:7:11.19:641,11,0	0/0:20,0:20:44.88:0,45,3065	0/0:8,0:8:19.62:0,20,1483	0/0:15,0:15:42.14:0,42,3542	0/0:16,0:16:48.16:0,48,4099	0/0:61,0:61:99:0,175,13666	0/0:20,0:20:49.41:0,49,3000	0/0:26,0:26:72.24:0,72,5637	0/0:17,0:17:51.18:0,51,4453	0/0:10,0:10:27.09:0,27,1988	0/0:46,0:46:99:0,138,12064	0/0:18,0:18:54.19:0,54,4523	0/0:16,0:16:48.15:0,48,4075	0/0:20,0:20:60.21:0,60,4950	0/0:23,0:23:66.22:0,66,5630	0/0:34,0:34:99:0,102,8256	0/0:33,0:33:96.29:0,96,7552	0/0:24,0:24:66.21:0,66,4072	0/0:17,0:17:48.16:0,48,4250	0/0:68,0:68:99:0,202,15771	0/0:16,0:16:48.16:0,48,4086	0/0:10,0:10:30.10:0,30,2679	0/0:27,0:27:81.28:0,81,6953	0/0:19,0:19:57.20:0,57,4530	0/0:19,0:19:57.20:0,57,4971	0/0:13,0:13:39.13:0,39,3050	0/0:9,0:9:27.09:0,27,2361
chr10	107639149	.	AG	A	2147.39	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.480;DP=601;FS=0.000;HRun=9;HaplotypeScore=63.7662;InbreedingCoeff=0.9717;MQ=77.64;MQ0=0;MQRankSum=-1.958;QD=15.67;ReadPosRankSum=1.608;VQSLOD=3.7536;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,1:49:83.80:0,84,1175	1/1:3,0:8:10.18:30,10,0	0/0:18,0:17:30.08:0,30,330	0/0:18,0:18:8.26:0,8,257	0/0:15,0:15:24.07:0,24,273	0/0:13,0:13:36.11:0,36,414	0/0:31,0:31:75.22:0,75,865	1/1:9,8:17:14.11:130,14,0	0/0:21,0:21:48.14:0,48,554	0/0:24,1:25:26.69:0,27,561	0/0:17,0:17:36.07:0,36,387	1/1:2,14:16:24.01:220,24,0	0/0:27,0:27:66.16:0,66,732	0/0:20,0:20:45.12:0,45,510	0/0:23,0:23:63.18:0,63,719	0/0:17,0:17:36.08:0,36,395	0/0:30,0:30:87.22:0,87,980	0/0:31,0:31:72.21:0,72,829	1/1:5,15:20:44.05:387,44,0	1/1:6,15:21:35.50:313,36,0	1/1:5,35:40:96.05:879,96,0	0/0:24,0:24:47.70:0,48,540	0/0:17,0:17:39.09:0,39,427	0/0:17,0:18:41.96:0,42,464	0/0:16,0:16:39.11:0,39,441	0/0:25,0:25:48.04:0,48,535	1/1:0,15:15:42.02:384,42,0	0/0:9,0:9:15.02:0,15,152
chr10	107639599	.	TGAA	T	5326.23	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.116;DP=748;FS=2.217;HRun=0;HaplotypeScore=109.5279;InbreedingCoeff=0.9998;MQ=77.74;MQ0=0;MQRankSum=-4.394;QD=40.66;ReadPosRankSum=-1.232;VQSLOD=5.6248;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:64:99:0,190,4290	0/0:11,0:11:33.11:0,33,761	0/0:25,0:25:69.24:0,69,1397	0/0:22,0:22:53.39:0,53,1173	0/0:24,0:24:69.24:0,69,1562	0/0:28,0:28:84.28:0,84,1894	0/0:38,0:38:99:0,111,2537	1/1:1,29:30:87.30:1479,87,0	0/0:25,0:25:75.24:0,75,1627	0/0:34,0:34:99:0,102,2261	0/0:11,0:11:30.10:0,30,692	0/0:21,0:21:63.19:0,63,1326	0/0:17,0:17:48.16:0,48,1086	0/0:37,0:37:99:0,108,2401	0/0:29,0:29:87.28:0,87,1910	0/0:24,0:24:72.23:0,72,1616	0/0:42,0:42:99:0,117,2584	0/0:34,0:34:96.28:0,96,2121	1/1:0,20:20:60.19:983,60,0	1/1:1,20:21:39.13:664,39,0	1/1:3,43:46:96.33:1587,96,0	0/0:21,0:21:60.21:0,60,1339	0/0:17,0:17:45.15:0,45,1005	0/0:33,0:33:96.33:0,96,2214	0/0:21,0:21:60.21:0,60,1384	0/0:26,0:26:69.24:0,69,1566	1/1:0,14:14:36.12:613,36,0	0/0:13,0:13:39.13:0,39,899
chr10	107642549	.	A	AC	712.58	PASS	AB=0.754;AC=9;AF=0.161;AN=56;BaseQRankSum=-1.924;DP=517;FS=10.251;HRun=10;HaplotypeScore=67.0004;InbreedingCoeff=0.3806;MQ=81.78;MQ0=0;MQRankSum=-3.250;QD=5.20;ReadPosRankSum=-3.451;VQSLOD=-0.0506;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:50.48:0,50,389	0/0:1,0:9:15.02:0,15,48	0/0:21,0:18:19.45:0,19,135	0/1:21,0:22:21.07:21,0,124	0/0:18,2:20:34.83:0,35,247	0/0:15,1:16:3.87:0,4,223	0/0:18,0:18:13.84:0,14,234	0/1:13,4:17:36.37:53,0,36	0/0:23,0:23:44.46:0,44,361	0/0:13,0:15:21.51:0,22,142	0/0:9,0:10:17:0,17,129	1/1:6,6:18:20.74:178,21,0	0/0:21,0:21:47.51:0,48,376	0/0:17,0:19:33.82:0,34,252	0/0:19,0:19:50.83:0,51,407	0/0:21,0:21:44.68:0,45,355	0/0:20,0:20:59.93:0,60,492	0/0:9,0:11:29:0,29,227	0/1:6,8:14:16.26:241,0,16	1/1:6,8:14:8.87:67,9,0	0/1:11,19:30:0.04:200,0,0	0/0:17,0:17:22.99:0,23,255	0/0:12,0:12:26.64:0,27,201	0/0:24,0:24:50.91:0,51,419	0/0:20,0:23:21.77:0,22,144	0/0:17,0:17:44.12:0,44,336	0/1:13,9:22:82.43:100,0,82	0/0:21,0:21:38.90:0,39,318
chr10	107643258	.	G	GT	71.98	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.079;DP=747;FS=4.925;HRun=5;HaplotypeScore=76.4928;InbreedingCoeff=0.9655;MQ=90.12;MQ0=0;MQRankSum=-0.473;QD=14.40;ReadPosRankSum=-0.708;VQSLOD=2.7530;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:99:0,120,1279	1/1:1,4:5:12.04:158,12,0	0/0:35,0:35:89.62:0,90,963	0/0:27,0:27:72.18:0,72,771	0/0:23,0:23:60.12:0,60,629	0/0:26,0:26:69.13:0,69,722	0/0:38,0:38:99:0,108,1150	0/0:26,0:26:66.15:0,66,703	0/0:20,0:20:51.13:0,51,548	0/0:20,0:20:48.12:0,48,513	0/0:19,0:19:45.10:0,45,476	0/0:34,0:34:96.24:0,96,1032	0/0:26,0:26:75.19:0,75,805	0/0:24,0:24:69.17:0,69,741	0/0:23,0:23:66.15:0,66,701	0/0:22,0:22:57.14:0,57,612	0/0:47,0:47:99:0,135,1441	0/0:27,0:27:72.16:0,72,765	0/0:32,0:32:84.14:0,84,881	0/0:21,0:21:57.14:0,57,613	0/0:54,0:54:99:0,147,1580	0/0:23,0:23:60.15:0,60,645	0/0:10,0:10:27.03:0,27,273	0/0:33,0:33:84.20:0,84,902	0/0:25,0:25:75.19:0,75,806	0/0:19,0:19:54.14:0,54,580	0/0:34,0:34:96.24:0,96,1031	0/0:8,0:8:24.06:0,24,258
chr10	107645439	.	A	ATT	2572.37	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=13.235;DP=462;FS=0.432;HRun=1;HaplotypeScore=78.9337;InbreedingCoeff=0.8981;MQ=72.91;MQ0=0;MQRankSum=-8.316;QD=23.39;ReadPosRankSum=0.190;VQSLOD=1.7347;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.23:0,72,1147	1/1:3,5:8:23.94:270,24,0	0/0:10,0:10:27.01:0,27,352	0/0:8,0:8:19.59:0,20,242	0/0:24,0:24:66.18:0,66,1045	0/0:18,0:18:54.18:0,54,879	0/0:21,0:21:63.19:0,63,960	1/1:28,0:28:62.47:614,62,0	0/0:19,0:19:57.19:0,57,929	0/0:21,0:21:60.20:0,60,977	0/0:22,0:22:63.18:0,63,955	1/1:20,0:20:52.41:577,52,0	0/0:17,0:17:51.17:0,51,825	0/0:11,0:11:33.08:0,33,470	0/0:20,0:20:57.19:0,57,929	0/0:11,0:11:33.10:0,33,493	0/0:22,0:22:66.21:0,66,1051	0/0:15,0:15:45.12:0,45,699	1/1:15,0:15:34.32:350,34,0	1/1:10,0:10:25.98:284,26,0	0/1:13,0:13:20.32:200,0,20	0/0:11,0:11:33.11:0,33,536	0/0:13,0:13:39.13:0,39,634	0/0:19,0:19:57.19:0,57,927	0/0:9,0:9:27.06:0,27,412	0/0:28,0:28:84.24:0,84,1258	1/1:16,0:16:41.62:468,42,0	0/0:9,0:9:24.04:0,24,319
chr10	107645440	.	A	ATT	2087.85	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=13.929;DP=460;FS=0.000;HRun=1;HaplotypeScore=79.1597;InbreedingCoeff=0.3454;MQ=73.82;MQ0=0;MQRankSum=-7.702;QD=18.98;ReadPosRankSum=1.143;VQSLOD=1.1738;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.23:0,69,1053	1/1:4,5:9:22.89:284,23,0	0/0:10,0:10:23.44:0,23,329	0/0:9,0:9:6.26:0,6,260	0/0:24,0:24:63.19:0,63,965	0/0:18,0:18:54.18:0,54,827	0/0:21,0:21:57.18:0,57,852	0/1:27,0:27:99:429,0,108	0/0:19,0:19:57.19:0,57,873	0/0:20,0:20:60.20:0,60,918	0/0:22,0:22:66.15:0,66,938	1/1:20,0:20:27.19:498,27,0	0/0:17,0:17:51.17:0,51,780	0/0:10,0:10:30.09:0,30,438	0/0:21,0:21:60.16:0,60,893	0/0:10,0:10:30.09:0,30,438	0/0:21,0:21:63.21:0,63,965	0/0:15,0:15:45.10:0,45,657	0/1:15,0:15:50.43:270,0,50	0/1:10,0:10:19.67:206,0,20	0/1:13,0:13:50.91:174,0,51	0/0:11,0:11:33.11:0,33,505	0/0:13,0:13:39.13:0,39,597	0/0:20,0:20:57.19:0,57,872	0/0:9,0:9:24.08:0,24,368	0/0:28,0:28:75.25:0,75,1129	0/1:16,0:16:8.87:380,0,9	0/0:9,0:9:24.08:0,24,366
chr10	107645444	.	T	TTATC	7407.11	PASS	AB=0.522;AC=13;AF=0.232;AN=56;BaseQRankSum=10.733;DP=447;FS=0.000;HRun=0;HaplotypeScore=78.2647;InbreedingCoeff=0.8966;MQ=76.49;MQ0=0;MQRankSum=-9.238;QD=72.62;ReadPosRankSum=-0.335;VQSLOD=6.5582;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:68.90:0,69,1392	1/1:8,0:8:24.08:434,24,0	0/0:10,0:10:23.67:0,24,425	0/0:11,0:11:20.46:0,20,374	0/0:24,0:24:71.67:0,72,1362	0/0:19,0:19:54.19:0,54,1112	0/0:19,0:19:57.18:0,57,1156	1/1:0,24:25:72.25:1991,72,0	0/0:19,0:19:57.20:0,57,1194	0/0:20,0:20:60.21:0,60,1256	0/0:20,0:20:57.19:0,57,1136	1/1:0,20:20:54.19:1553,54,0	0/0:17,0:17:51.18:0,51,1067	0/0:9,0:9:27.09:0,27,566	0/0:21,0:21:63.21:0,63,1248	0/0:9,0:9:27.09:0,27,566	0/0:21,0:21:63.22:0,63,1305	0/0:14,0:14:39.12:0,39,763	1/1:0,12:12:35.86:964,36,0	1/1:0,9:10:24.08:688,24,0	0/1:1,10:12:35.83:570,0,36	0/0:11,0:11:33.11:0,33,672	0/0:13,0:13:39.13:0,39,813	0/0:20,0:20:60.19:0,60,1184	0/0:9,0:9:24.08:0,24,503	0/0:24,0:24:72.25:0,72,1494	1/1:0,14:15:42.14:1208,42,0	0/0:11,0:11:24.08:0,24,503
chr10	107645924	.	T	TTCTGTCTG	7331.73	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-0.508;DP=545;FS=1.759;HRun=0;HaplotypeScore=140.2250;InbreedingCoeff=0.9623;MQ=72.95;MQ0=0;MQRankSum=-9.514;QD=58.65;ReadPosRankSum=-1.527;VQSLOD=4.4711;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:69.21:0,69,1564	1/1:0,0:2:5.99:50,6,0	0/0:35,0:35:51.43:0,51,1166	0/0:20,0:19:42.14:0,42,978	0/0:20,0:20:54.19:0,54,1405	0/0:25,0:25:69.24:0,69,1754	0/0:19,0:19:48.13:0,48,1064	1/1:31,4:40:48.16:1530,48,0	0/0:15,0:15:39.13:0,39,974	0/0:23,0:23:63.22:0,63,1620	0/0:12,0:12:30.10:0,30,761	1/1:5,10:15:42.14:1662,42,0	0/0:17,0:17:39.13:0,39,1018	0/0:15,0:15:42.14:0,42,1028	0/0:7,0:7:21.07:0,21,548	0/0:20,0:20:57.20:0,57,1461	0/0:55,0:55:99:0,126,2992	0/0:21,0:21:51.15:0,51,1230	1/1:13,6:20:27.08:952,27,0	1/1:4,4:9:12.04:469,12,0	1/1:5,4:9:12.04:435,12,0	0/0:9,0:9:27.09:0,27,705	0/0:6,0:6:12.04:0,12,313	0/0:18,0:18:54.17:0,54,1291	0/0:15,0:15:33.10:0,33,780	0/0:19,0:19:51.18:0,51,1297	1/1:13,17:30:54.18:2233,54,0	0/0:19,0:19:51.08:0,51,1058
chr10	107646212	.	AGTGTGTGTGTGTGTGT	A	2364.39	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=6.614;DP=699;FS=14.264;HRun=0;HaplotypeScore=274.8605;InbreedingCoeff=0.8704;MQ=63.75;MQ0=12;MQRankSum=-3.950;QD=15.66;ReadPosRankSum=1.386;VQSLOD=1.0448;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:51.09:0,51,2763	0/0:4,0:4:6.02:0,6,90	0/0:32,0:19:6.02:0,6,116	0/0:37,0:26:18.06:0,18,334	0/0:24,0:25:33.11:0,33,2151	0/0:30,0:31:43.85:0,44,2561	0/0:32,0:32:46.02:0,46,1876	1/1:23,0:23:0.27:50,0,0	0/0:17,0:19:51.16:0,51,2609	0/0:34,0:34:51.17:0,51,2877	0/0:9,0:9:11.34:0,11,750	1/1:10,8:17:30.06:1010,30,0	0/0:29,0:30:60.18:0,60,3262	0/0:19,0:19:24.08:0,24,1648	0/0:17,0:17:30.10:0,30,1965	0/0:18,0:18:27.05:0,27,1281	0/0:37,0:37:72.25:0,72,3910	0/0:28,0:29:51.53:0,52,2684	1/1:15,8:23:17.97:401,18,0	./.	1/1:59,3:61:15.68:169,16,0	0/0:16,0:16:23.78:0,24,1122	0/0:10,0:10:15.05:0,15,774	0/0:38,0:39:66.23:0,66,3813	0/0:16,0:16:27.07:0,27,1222	0/0:26,0:26:43.67:0,44,1898	1/1:10,15:25:29.97:895,30,0	0/0:16,0:16:48.16:0,48,2531
chr10	107646338	.	GGT	G	3200.70	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.975;DP=780;FS=13.022;HRun=0;HaplotypeScore=123.2149;InbreedingCoeff=0.9910;MQ=56.95;MQ0=8;MQRankSum=-7.248;QD=19.76;ReadPosRankSum=-4.230;VQSLOD=2.4011;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:51:99:0,138,2232	0/0:5,0:5:11.18:0,11,82	0/0:44,0:25:32.49:0,32,607	0/0:44,0:29:58.70:0,59,707	0/0:14,0:13:36.12:0,36,601	0/0:25,0:25:66.19:0,66,1034	0/0:37,0:36:84.15:0,84,1326	1/1:7,14:21:54.14:645,54,0	0/0:23,0:23:63.15:0,63,940	0/0:30,0:30:78.25:0,78,1249	0/0:8,0:8:24.07:0,24,365	1/1:33,0:33:59.85:631,60,0	0/0:30,0:30:89.93:0,90,1411	0/0:31,0:30:78.06:0,78,1222	0/0:28,0:28:78.27:0,78,1283	0/0:38,0:38:99:0,99,1631	0/0:24,0:24:65.91:0,66,1000	0/0:36,0:36:93.21:0,93,1406	1/1:14,2:14:30.09:358,30,0	1/1:7,3:10:20.82:182,21,0	1/1:54,2:55:77.79:824,78,0	0/0:25,0:25:52.24:0,52,833	0/0:15,0:14:35.99:0,36,539	0/0:33,0:33:86.90:0,87,1298	0/0:22,0:22:57.16:0,57,879	0/0:33,0:33:34.89:0,35,1354	1/1:26,0:26:63.17:749,63,0	0/0:21,0:21:60.21:0,60,993
chr10	107646345	.	GTGTGTT	G	4149.50	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=14.644;DP=799;FS=7.050;HRun=0;HaplotypeScore=180.8875;InbreedingCoeff=0.8920;MQ=57.33;MQ0=15;MQRankSum=-6.026;QD=24.27;ReadPosRankSum=-2.440;VQSLOD=2.3392;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:52:99:0,152,3831	0/1:6,0:6:10.98:122,0,11	0/0:44,0:22:38.92:0,39,746	0/0:50,0:31:15.40:0,15,926	0/0:14,0:13:39.11:0,39,1116	0/0:26,0:26:78.15:0,78,2108	0/0:36,0:35:85.59:0,86,2093	1/1:22,0:22:51.24:485,51,0	0/0:26,0:26:66.12:0,66,1705	0/0:32,0:32:90.18:0,90,2121	0/0:8,0:8:24.07:0,24,672	1/1:21,11:32:60.02:1227,60,0	0/0:33,0:33:98.83:0,99,2518	0/0:31,0:30:81.23:0,81,2231	0/0:27,0:27:78.23:0,78,2334	0/0:36,0:36:97.16:0,97,2934	0/0:27,0:27:75.17:0,75,1824	0/0:38,0:38:96.27:0,96,2692	1/1:17,0:14:12.26:402,12,0	1/1:13,0:13:11.73:233,12,0	1/1:58,0:55:38.91:564,39,0	0/0:23,0:23:57.18:0,57,1688	0/0:17,0:16:42.06:0,42,924	0/0:32,0:32:93.24:0,93,2386	0/0:20,0:20:51.13:0,51,1335	0/0:34,0:34:87.20:0,87,2449	1/1:23,0:23:61.81:1117,62,0	0/0:21,0:21:63.10:0,63,1679
chr10	107646350	.	TTTGTG	T	2206.34	PASS	AB=0.921;AC=12;AF=0.214;AN=56;BaseQRankSum=13.423;DP=789;FS=3.390;HRun=0;HaplotypeScore=170.0313;InbreedingCoeff=0.6747;MQ=56.65;MQ0=16;MQRankSum=-9.556;QD=13.37;ReadPosRankSum=0.999;VQSLOD=2.8761;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:53:99:0,155,3963	0/1:6,0:6:27.80:58,0,28	0/0:46,0:22:56.37:0,56,955	0/0:45,0:23:65.76:0,66,1241	0/0:14,0:13:39.13:0,39,1100	0/0:27,0:27:81.28:0,81,2219	0/0:36,0:35:98.34:0,98,2358	1/1:19,4:23:1.36:197,1,0	0/0:23,0:23:69.23:0,69,1855	0/0:34,0:34:99:0,102,2428	0/0:9,0:9:24.08:0,24,697	1/1:12,19:31:44.97:758,45,0	0/0:35,0:35:99:0,105,2631	0/0:29,0:28:81.25:0,81,2218	0/0:27,0:27:81.26:0,81,2238	0/0:37,0:37:99:0,109,2932	0/0:26,0:27:81.24:0,81,1975	0/0:34,0:34:99:0,99,2749	0/1:13,3:13:50.37:210,0,50	1/1:7,5:12:14.79:172,15,0	1/1:39,13:49:1.04:269,1,0	0/0:20,0:20:57.19:0,57,1605	0/0:18,0:17:39.13:0,39,982	0/0:33,0:33:93.31:0,93,2367	0/0:20,0:20:54.18:0,54,1398	0/0:33,0:33:94.56:0,95,2441	1/1:11,14:25:35.65:705,36,0	0/0:23,0:23:69.22:0,69,1798
chr10	107646351	.	TTG	T	682.22	PASS	AB=0.879;AC=14;AF=0.250;AN=56;BaseQRankSum=12.981;DP=792;FS=0.939;HRun=0;HaplotypeScore=134.9423;InbreedingCoeff=0.7921;MQ=56.70;MQ0=16;MQRankSum=-6.663;QD=3.41;ReadPosRankSum=-0.464;VQSLOD=2.7890;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:54:99:0,117,1775	1/1:1,0:6:8.35:41,8,0	0/0:46,0:22:23.92:0,24,340	0/0:45,0:23:43.55:0,44,490	0/0:14,0:13:33.10:0,33,504	0/0:28,0:28:72.20:0,72,1053	0/0:36,0:35:32.90:0,33,973	1/1:23,0:23:24.25:108,24,0	0/0:23,0:23:54.16:0,54,813	0/0:34,0:34:69.06:0,69,1046	0/0:8,0:8:21.07:0,21,332	1/1:30,0:31:39.80:221,40,0	0/0:34,2:36:17.45:0,17,1142	0/0:29,0:28:66.14:0,66,992	0/0:27,0:27:66.17:0,66,1013	0/0:37,0:37:86.46:0,86,1276	0/0:26,0:27:62.84:0,63,907	0/0:34,0:34:78.27:0,78,1242	0/1:13,0:13:3.54:50,0,4	1/1:13,0:13:3.97:41,4,0	1/1:52,0:50:25.06:111,25,0	0/0:19,1:20:14.77:0,15,705	0/0:17,0:16:29.13:0,29,430	0/1:30,3:33:33.99:34,0,955	0/0:20,0:20:39.13:0,39,623	0/0:33,0:33:65.24:0,65,992	1/1:25,0:25:55.36:261,55,0	0/0:23,0:23:54.10:0,54,805
chr10	107646509	.	A	AC	5697.52	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.899;DP=703;FS=2.477;HRun=3;HaplotypeScore=98.7995;InbreedingCoeff=0.9967;MQ=76.94;MQ0=0;MQRankSum=-3.546;QD=35.39;ReadPosRankSum=-1.249;VQSLOD=4.4558;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1368	1/1:2,7:9:15.05:210,15,0	0/0:17,0:17:51.15:0,51,596	0/0:15,0:15:39.12:0,39,464	0/0:20,0:20:54.17:0,54,646	0/0:20,0:20:60.18:0,60,720	0/0:35,0:35:99:0,99,1188	1/1:7,28:35:87.16:1137,87,0	0/0:25,0:25:75.23:0,75,899	0/0:29,0:29:81.24:0,81,963	0/0:11,0:11:33.10:0,33,396	1/1:2,27:29:75.25:1037,75,0	0/0:30,0:30:90.28:0,90,1078	0/0:26,0:26:69.21:0,69,827	0/0:27,0:27:81.25:0,81,970	0/0:40,0:40:99:0,117,1404	0/0:34,0:34:99:0,99,1173	0/0:38,0:38:99:0,108,1295	1/1:2,16:18:51.17:711,51,0	1/1:1,11:12:30.10:419,30,0	1/1:2,47:49:99:1806,129,0	0/0:16,0:16:42.13:0,42,504	0/0:14,0:14:36.11:0,36,431	0/0:33,0:33:90.28:0,90,1079	0/0:16,0:16:45.14:0,45,538	0/0:34,0:34:99:0,99,1153	1/1:0,9:9:27.09:378,27,0	0/0:22,0:22:66.20:0,66,792
chr10	107646738	.	TC	T	3522.50	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.473;DP=654;FS=1.308;HRun=2;HaplotypeScore=99.3067;InbreedingCoeff=0.9962;MQ=80.23;MQ0=0;MQRankSum=-4.306;QD=25.34;ReadPosRankSum=3.403;VQSLOD=3.5120;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1637	0/0:8,0:8:24.08:0,24,359	0/0:17,0:17:42.14:0,42,617	0/0:18,0:18:51.16:0,51,726	0/0:14,0:14:42.14:0,42,628	0/0:25,0:25:75.25:0,75,1123	0/0:41,0:41:99:0,120,1777	1/1:5,20:25:57.17:665,57,0	0/0:24,0:24:69.23:0,69,1034	0/0:24,0:24:72.24:0,72,1061	0/0:6,0:6:18.06:0,18,270	1/1:3,28:31:78.23:910,78,0	0/0:29,0:29:84.27:0,84,1224	0/0:19,0:19:57.18:0,57,835	0/0:26,0:26:78.26:0,78,1169	0/0:33,0:33:96.31:0,96,1418	0/0:23,0:23:69.21:0,69,995	0/0:28,0:28:81.27:0,81,1212	1/1:5,12:17:36.07:406,36,0	1/1:0,8:9:18.05:210,18,0	1/1:7,38:45:81.71:946,82,0	0/0:18,0:18:54.17:0,54,788	0/0:19,0:19:52.42:0,52,767	0/0:33,0:33:99:0,99,1434	0/0:24,0:24:72.24:0,72,1079	0/0:32,0:32:96.31:0,96,1418	1/1:0,12:12:33.10:385,33,0	0/0:16,0:16:48.15:0,48,698
chr10	107649336	.	CTCTG	C	240.39	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.560;DP=744;FS=0.000;HRun=0;HaplotypeScore=118.6670;InbreedingCoeff=0.9723;MQ=73.78;MQ0=0;MQRankSum=-2.283;QD=30.05;ReadPosRankSum=1.770;VQSLOD=3.7292;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,144,3665	1/1:1,7:8:18.06:331,18,0	0/0:20,0:20:57.19:0,57,1375	0/0:21,0:21:57.78:0,58,1254	0/0:13,0:13:33.11:0,33,823	0/0:20,0:20:57.20:0,57,1505	0/0:39,0:39:99:0,99,2502	0/0:22,0:22:60.21:0,60,1529	0/0:37,0:37:99:0,105,2764	0/0:32,0:32:86.33:0,86,2185	0/0:6,0:6:15.05:0,15,390	0/0:35,0:35:99:0,102,2656	0/0:25,0:25:75.26:0,75,1972	0/0:32,0:32:93.32:0,93,2410	0/0:26,0:26:72.25:0,72,1856	0/0:20,0:20:60.21:0,60,1554	0/0:22,0:22:63.22:0,63,1661	0/0:29,0:29:87.25:0,87,2193	0/0:24,0:24:66.23:0,66,1728	0/0:16,0:16:45.15:0,45,1178	0/0:90,0:90:99:0,256,6551	0/0:14,0:14:42.13:0,42,1045	0/0:16,0:16:48.16:0,48,1193	0/0:48,0:48:99:0,141,3674	0/0:21,0:21:57.20:0,57,1470	0/0:31,0:31:87.30:0,87,2190	0/0:18,0:18:48.16:0,48,1258	0/0:7,0:7:21.07:0,21,554
chr10	107650261	.	T	TCC	2295.37	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-1.123;DP=566;FS=23.479;HRun=9;HaplotypeScore=80.4283;InbreedingCoeff=0.9754;MQ=78.03;MQ0=0;MQRankSum=-0.174;QD=20.68;ReadPosRankSum=-3.842;VQSLOD=0.0249;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,105,1082	1/1:1,0:6:12.48:43,12,0	0/0:17,0:17:32.81:0,33,314	0/0:21,0:21:11.20:0,11,251	0/0:15,0:15:10.84:0,11,324	0/0:29,0:29:69.12:0,69,725	0/0:25,0:26:77.93:0,78,810	1/1:8,10:24:37.72:378,38,0	0/0:21,0:21:43.91:0,44,477	0/0:20,0:20:51.11:0,51,527	0/0:22,0:22:50.91:0,51,502	1/1:2,17:20:47.65:699,48,0	0/0:20,0:20:54.10:0,54,564	0/0:19,0:19:48.09:0,48,510	0/0:24,0:25:71.92:0,72,746	0/0:19,0:19:49:0,49,513	0/0:35,0:35:90.21:0,90,958	0/0:15,0:15:42.06:0,42,435	1/1:7,13:21:38.62:559,39,0	1/1:10,0:10:14.81:125,15,0	1/1:2,15:17:21.06:303,21,0	0/0:18,0:18:45.07:0,45,471	0/0:13,0:13:20.95:0,21,206	0/0:23,0:23:63.14:0,63,670	0/0:9,0:9:21.04:0,21,224	0/0:30,0:30:64.23:0,64,755	1/1:3,9:12:26.84:385,27,0	0/0:16,0:16:48.12:0,48,511
chr10	107650268	.	CCCAAGACTCATTGTTTGCCTGG	C	325.06	PASS	AB=0.933;AC=5;AF=0.089;AN=56;BaseQRankSum=-3.070;DP=570;FS=32.012;HRun=0;HaplotypeScore=317.0991;InbreedingCoeff=-0.1020;MQ=76.30;MQ0=0;MQRankSum=0.368;QD=3.61;ReadPosRankSum=-5.971;VQSLOD=0.4890;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,10963	0/0:7,0:7:18.04:0,18,1430	0/0:17,0:17:51.17:0,51,3113	0/0:17,0:17:42.12:0,42,2425	0/0:14,0:14:10.88:0,11,2837	0/0:26,0:26:72.20:0,72,6522	0/0:29,0:29:87.30:0,87,7454	0/1:26,0:26:99:167,0,3931	0/0:19,0:19:53:0,53,4884	0/0:19,0:19:57.19:0,57,5030	0/0:21,0:21:63.21:0,63,5409	0/1:23,0:23:99:123,0,3810	0/0:20,0:20:60.17:0,60,4693	0/0:20,0:20:54.16:0,54,4993	0/0:27,0:27:81.27:0,81,6851	0/0:18,0:18:52.06:0,52,3846	0/0:31,0:31:90.29:0,90,7844	0/0:17,0:17:51.13:0,51,4527	0/1:17,0:17:43.13:43,0,2550	0/1:5,5:10:33.47:33,0,918	0/0:22,0:22:10.06:0,10,2741	0/0:20,0:20:54.14:0,54,4355	0/0:11,0:11:30.07:0,30,2856	0/0:23,0:23:66.21:0,66,5688	0/0:9,0:9:24.07:0,24,2276	0/0:33,0:33:79.36:0,79,8141	0/1:14,0:13:75.75:76,0,1769	0/0:19,0:19:57.20:0,57,5489
chr10	107650534	.	GCC	G	2179.59	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.643;DP=461;FS=9.402;HRun=9;HaplotypeScore=63.7928;InbreedingCoeff=0.9572;MQ=76.84;MQ0=1;MQRankSum=-1.288;QD=24.49;ReadPosRankSum=-0.341;VQSLOD=2.2142;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:77.37:0,77,1161	0/0:1,0:6:11.41:0,11,42	0/0:13,0:13:6.97:0,7,256	0/0:14,0:15:13.80:0,14,389	0/0:17,0:17:42.13:0,42,658	0/0:8,0:8:24.08:0,24,389	0/0:31,0:31:87.28:0,87,1403	1/1:3,14:17:42.10:477,42,0	0/0:14,0:14:42.13:0,42,664	0/0:16,0:16:33.11:0,33,531	0/0:4,0:4:12.04:0,12,195	0/0:0,0:14:32.16:0,32,112	0/0:13,0:13:39.13:0,39,633	0/0:18,0:18:48.13:0,48,726	0/0:14,0:14:39.13:0,39,638	0/0:13,0:13:39.08:0,39,604	0/0:34,0:35:98.80:0,99,1534	0/0:18,0:18:51.15:0,51,809	1/1:1,15:16:45.12:514,45,0	1/1:2,8:10:21.06:245,21,0	1/1:5,30:34:66.19:769,66,0	0/0:13,0:13:24.55:0,25,394	0/0:16,0:17:41.59:0,42,618	0/0:27,0:30:86.26:0,86,1297	0/0:10,0:11:27.09:0,27,422	0/0:16,0:16:45.15:0,45,735	1/1:0,11:11:30.09:349,30,0	0/0:7,0:7:21.07:0,21,340
chr10	107652274	.	G	GACATACACAC	2213.06	PASS	AB=0.878;AC=11;AF=0.196;AN=56;BaseQRankSum=0.606;DP=934;FS=15.164;HRun=0;HaplotypeScore=256.1321;InbreedingCoeff=0.6884;MQ=53.23;MQ0=28;MQRankSum=-5.390;QD=9.30;ReadPosRankSum=-4.028;VQSLOD=0.4719;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:56:99:0,117,2944	0/1:11,0:11:35.80:67,0,36	0/0:58,0:18:20.43:0,20,274	0/0:57,0:19:10.98:0,11,173	0/0:39,0:39:99:0,102,2263	0/0:32,0:32:69.19:0,69,1451	0/0:31,0:31:51.13:0,51,1362	1/1:49,0:44:56.46:646,56,0	0/0:17,0:17:17.25:0,17,1009	0/0:35,0:32:36.34:0,36,1872	0/0:16,0:16:36.10:0,36,791	0/1:27,0:27:13.05:70,0,13	0/0:24,0:23:54.10:0,54,1148	0/0:29,0:29:57.13:0,57,1238	0/0:30,0:30:63.18:0,63,1546	0/0:40,0:40:96.26:0,96,2204	0/0:27,0:27:62.87:0,63,1405	0/0:36,0:36:78.29:0,78,1651	1/1:36,0:29:32.95:574,33,0	0/1:13,17:30:0.13:1,0,0	1/1:63,0:59:44.79:863,45,0	0/0:39,0:39:87.30:0,87,2072	0/0:21,0:21:48.11:0,48,993	0/0:31,0:31:68.73:0,69,1691	0/0:33,0:33:75.21:0,75,1813	0/0:26,0:25:48.15:0,48,1078	1/1:4,15:21:3.24:152,3,0	0/0:17,0:17:39.13:0,39,1052
chr10	107653002	.	TTCTCCC	T	101.54	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.359;DP=617;FS=12.545;HRun=0;HaplotypeScore=115.1536;InbreedingCoeff=0.8522;MQ=64.72;MQ0=16;MQRankSum=-2.904;QD=20.31;ReadPosRankSum=-0.279;VQSLOD=2.6589;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,126,3939	1/1:1,4:5:9.03:185,9,0	0/0:32,0:14:15.28:0,15,259	0/0:33,0:9:9.01:0,9,165	0/0:12,0:12:27.09:0,27,761	0/0:30,0:28:60.19:0,60,1698	0/0:29,0:28:65.03:0,65,1639	0/0:36,0:35:63.15:0,63,1459	0/0:11,0:10:24.07:0,24,570	0/0:22,0:22:51.17:0,51,1545	0/0:12,0:12:30.08:0,30,828	0/0:19,0:19:54.12:0,54,1641	0/0:13,0:13:33.10:0,33,932	0/0:15,0:15:30.07:0,30,829	0/0:23,0:23:63.16:0,63,1935	0/0:16,0:16:39.11:0,39,1015	0/0:26,0:25:69.22:0,69,2075	0/0:26,0:25:63.20:0,63,1789	0/0:16,0:15:27.07:0,27,697	0/0:9,0:9:21.06:0,21,539	0/0:46,0:46:99:0,108,3314	0/0:12,0:11:27.04:0,27,760	0/0:9,0:7:18.06:0,18,499	0/0:42,0:42:99:0,114,3251	0/0:19,0:19:48.14:0,48,1336	0/0:23,0:23:60.20:0,60,1795	0/0:16,0:15:36.12:0,36,1014	0/0:16,0:15:21.05:0,21,498
chr10	107653411	.	TGTCCCTCC	T	1114.04	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.184;DP=514;FS=3.647;HRun=0;HaplotypeScore=126.4373;InbreedingCoeff=0.9498;MQ=90.81;MQ0=0;MQRankSum=-5.736;QD=69.63;ReadPosRankSum=1.789;VQSLOD=3.7540;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,4253	1/1:0,3:3:9.03:263,9,0	0/0:20,0:20:53.36:0,53,2336	0/0:24,0:24:69.24:0,69,2716	0/0:16,0:16:45.11:0,45,1833	0/0:10,0:10:27.09:0,27,1136	0/0:30,0:30:87.30:0,87,3742	0/0:28,0:28:78.26:0,78,3024	0/0:27,0:27:81.26:0,81,3489	0/0:18,0:18:54.19:0,54,2347	0/0:10,0:10:30.10:0,30,1248	1/1:0,13:13:33.11:965,33,0	0/0:15,0:15:45.15:0,45,1820	0/0:15,0:15:45.15:0,45,1965	0/0:14,0:14:42.14:0,42,1779	0/0:18,0:18:54.19:0,54,2409	0/0:43,0:43:99:0,126,5286	0/0:23,0:22:66.23:0,66,2853	0/0:18,0:18:52.99:0,53,2007	0/0:9,0:9:27.09:0,27,1192	0/0:38,0:38:99:0,111,4731	0/0:7,0:7:21.07:0,21,937	0/0:5,0:5:12.04:0,12,455	0/0:26,0:26:78.25:0,78,3297	0/0:10,0:10:30.10:0,30,1334	0/0:17,0:17:51.18:0,51,2308	0/0:12,0:12:36.12:0,36,1516	0/0:11,0:11:33.06:0,33,1376
chr10	107653650	.	GC	G	200.61	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.538;DP=302;FS=0.000;HRun=2;HaplotypeScore=31.6610;InbreedingCoeff=0.8827;MQ=77.75;MQ0=0;MQRankSum=-2.408;QD=16.72;ReadPosRankSum=0.042;VQSLOD=3.3469;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.11:0,63,835	1/1:0,5:5:9.03:117,9,0	0/0:10,0:10:29.68:0,30,298	0/0:4,0:4:5.89:0,6,60	0/0:10,0:10:27.09:0,27,402	0/0:9,0:9:27.09:0,27,403	0/0:16,0:16:42.01:0,42,555	0/0:15,0:15:42.05:0,42,552	0/0:8,0:8:24.08:0,24,358	0/0:14,0:14:39.11:0,39,560	0/0:8,0:8:18.06:0,18,264	1/1:0,6:7:15.05:194,15,0	0/0:9,0:9:27.09:0,27,386	0/0:8,0:8:18.49:0,18,246	0/0:10,0:10:30.10:0,30,445	0/0:8,0:8:21.07:0,21,301	0/0:14,0:14:42.14:0,42,623	0/0:8,0:8:24.08:0,24,359	0/0:9,0:9:27.01:0,27,322	0/0:8,0:8:24.04:0,24,334	0/0:35,0:35:99:0,105,1472	0/0:12,0:12:36.12:0,36,534	0/0:6,0:6:15.05:0,15,224	0/0:11,0:11:33.08:0,33,466	0/0:9,0:9:24.08:0,24,354	0/0:11,0:11:33.05:0,33,430	0/0:7,0:7:21.07:0,21,314	0/0:8,0:8:24.01:0,24,313
chr10	107653980	.	T	TTG	136.53	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.678;DP=577;FS=5.717;HRun=0;HaplotypeScore=106.9601;InbreedingCoeff=0.7186;MQ=64.84;MQ0=5;MQRankSum=-2.998;QD=10.50;ReadPosRankSum=0.678;VQSLOD=3.1337;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:74.63:0,75,992	0/0:3,0:2:2.88:0,3,15	0/0:30,0:17:30.52:0,31,506	0/0:23,0:13:4.30:0,4,181	0/0:21,0:21:51.12:0,51,679	0/0:26,0:26:69.16:0,69,946	0/0:28,0:28:84.16:0,84,1134	0/0:25,0:25:67.90:0,68,901	0/0:17,0:17:45.10:0,45,625	0/0:23,0:23:63.14:0,63,827	0/0:19,0:19:47.95:0,48,603	1/1:7,6:13:10.48:221,10,0	0/0:11,0:11:33.10:0,33,472	0/0:13,0:13:29.96:0,30,372	0/0:23,0:21:56.99:0,57,710	0/0:20,0:20:57.02:0,57,693	0/0:33,0:33:80.93:0,81,1149	0/0:28,0:24:66.07:0,66,877	0/0:38,0:36:99:0,105,1281	0/0:11,0:11:33.03:0,33,443	0/0:12,0:11:30.10:0,30,448	0/0:21,0:21:54.17:0,54,776	0/0:16,0:15:42.09:0,42,570	0/0:19,0:18:47.69:0,48,616	0/0:13,0:13:39.12:0,39,564	0/0:28,0:27:72.04:0,72,961	0/0:21,0:21:60.16:0,60,845	0/0:14,0:14:39.59:0,40,560
chr10	107653990	.	TGA	T	57.23	PASS	AB=0.948;AC=5;AF=0.093;AN=54;BaseQRankSum=6.173;DP=561;FS=25.998;HRun=0;HaplotypeScore=99.5057;InbreedingCoeff=0.3165;MQ=62.40;MQ0=11;MQRankSum=-2.672;QD=0.99;ReadPosRankSum=-2.831;VQSLOD=-0.1178;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:69.21:0,69,961	./.	0/0:28,1:14:12.11:0,12,248	0/1:20,0:10:21.68:22,0,116	0/0:15,1:16:39.49:0,39,510	0/0:25,0:25:66.19:0,66,939	0/0:28,0:27:81.04:0,81,1115	0/0:26,0:24:65.16:0,65,765	0/0:13,0:14:36.06:0,36,524	0/0:25,0:25:61.36:0,61,892	0/0:19,0:19:43.92:0,44,508	1/1:13,1:14:24.03:138,24,0	0/0:10,0:10:29.96:0,30,406	0/1:12,1:13:1.04:1,0,285	0/0:24,0:21:60.19:0,60,866	0/0:17,0:17:50.99:0,51,673	0/0:36,0:35:74.69:0,75,1091	0/0:29,0:24:54.56:0,55,790	0/0:32,0:29:76.09:0,76,842	0/1:10,1:11:3.95:4,0,224	0/0:10,0:10:13.20:0,13,215	0/0:20,0:19:1.53:0,2,396	0/0:18,0:17:35.50:0,35,492	0/0:19,0:17:26.87:0,27,544	0/0:17,0:17:43.76:0,44,612	0/0:21,3:23:1.27:0,1,775	0/0:22,0:22:56.60:0,57,559	0/0:14,0:14:39.01:0,39,505
chr10	107653992	.	AT	A	875.91	PASS	AB=0.888;AC=14;AF=0.250;AN=56;BaseQRankSum=5.834;DP=570;FS=7.812;HRun=14;HaplotypeScore=88.6461;InbreedingCoeff=0.3801;MQ=61.45;MQ0=15;MQRankSum=-3.833;QD=4.71;ReadPosRankSum=-1.524;VQSLOD=1.5882;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:23.34:0,23,367	0/0:3,0:2:0:0,0,0	0/0:28,0:13:10.48:0,10,63	0/0:20,0:10:2.71:0,3,40	0/0:15,2:17:33.68:0,34,281	0/0:22,3:25:1.45:0,1,434	0/0:25,2:27:15.61:0,16,399	1/1:16,9:23:1.80:157,2,0	0/0:13,0:14:33.02:0,33,300	0/0:24,2:26:21.91:0,22,334	0/0:17,0:19:35.46:0,35,318	0/1:16,0:16:32.62:33,0,44	0/0:9,1:11:6.34:0,6,189	0/0:8,0:16:15.23:0,15,109	0/0:21,1:21:53.87:0,54,479	0/1:14,3:17:25.66:26,0,210	0/0:34,1:36:51.13:0,51,563	0/0:27,2:23:30.93:0,31,422	0/1:22,11:29:2.57:237,0,3	1/1:1,9:11:25.65:162,26,0	1/1:7,3:10:10.92:68,11,0	0/1:15,1:17:8.33:8,0,194	0/0:18,0:17:29.96:0,30,261	0/1:17,2:17:0.52:1,0,145	0/0:14,1:17:20.43:0,20,285	0/0:23,0:23:47.62:0,48,411	1/1:3,17:22:51.50:334,51,0	0/1:11,2:14:11.31:11,0,175
chr10	107654011	.	CT	C	94.39	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.893;DP=529;FS=3.206;HRun=8;HaplotypeScore=75.6280;InbreedingCoeff=0.7854;MQ=53.02;MQ0=25;MQRankSum=-2.912;QD=5.24;ReadPosRankSum=0.347;VQSLOD=0.4174;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:43.84:0,44,468	1/1:1,3:3:6.01:57,6,0	0/0:11,0:5:3.90:0,4,38	0/0:9,0:3:0:0,0,0	0/0:19,0:19:34.90:0,35,379	0/0:27,0:27:48.12:0,48,547	0/0:28,0:25:66.14:0,66,758	0/0:24,0:20:45.09:0,45,517	0/0:19,0:19:39.02:0,39,420	0/0:19,0:18:36.10:0,36,423	0/0:15,0:15:30.04:0,30,337	1/1:9,5:14:14.47:144,14,0	0/0:13,0:13:32.92:0,33,335	0/0:12,0:12:24.01:0,24,254	0/0:25,0:23:57.15:0,57,659	0/0:15,0:15:30.09:0,30,362	0/0:41,2:39:49.25:0,49,856	0/0:32,0:26:60.16:0,60,701	0/0:18,0:14:14.94:0,15,160	0/0:14,0:13:28.16:0,28,302	0/0:8,0:6:9.03:0,9,109	0/0:22,0:20:41.98:0,42,471	0/0:18,0:16:33.01:0,33,371	0/0:18,0:14:27.07:0,27,315	0/0:18,0:18:35.92:0,36,385	0/0:19,0:18:45.11:0,45,507	0/0:22,0:22:48.55:0,49,500	0/0:17,0:17:27.08:0,27,325
chr10	107654893	.	C	CACAT	2567.29	PASS	AB=0.909;AC=17;AF=0.327;AN=52;BaseQRankSum=3.535;DP=723;FS=7.134;HRun=0;HaplotypeScore=138.1100;InbreedingCoeff=0.7699;MQ=61.33;MQ0=6;MQRankSum=-2.290;QD=10.03;ReadPosRankSum=-1.560;VQSLOD=2.5369;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:48.16:0,48,714	1/1:8,5:13:18.06:417,18,0	./.	./.	0/0:23,0:23:30.10:0,30,458	0/0:19,0:19:21.03:0,21,294	0/0:34,0:34:33.07:0,33,458	0/1:33,0:33:0:0,0,0	0/0:22,0:23:36.10:0,36,511	0/0:30,0:31:42.12:0,42,587	0/0:18,0:18:30.09:0,30,437	1/1:21,13:34:33.10:764,33,0	0/0:18,0:18:21.05:0,21,298	0/0:15,0:15:30.08:0,30,436	0/0:34,0:35:45.15:0,45,668	0/0:25,0:25:39.13:0,39,595	0/1:15,8:23:30.79:214,0,31	1/1:5,12:17:18.06:419,18,0	1/1:15,0:18:15.04:253,15,0	1/1:20,2:30:25.24:317,25,0	1/1:40,0:40:12.04:232,12,0	0/0:27,0:28:36.10:0,36,511	0/0:19,0:19:33.09:0,33,482	0/0:34,0:34:42.14:0,42,638	0/0:16,0:17:33.09:0,33,465	0/1:24,0:24:25.89:26,0,453	1/1:10,0:20:8.06:114,8,0	0/0:13,0:13:27.08:0,27,391
chr10	107655460	.	TCACACA	T	658.74	PASS	AB=0.978;AC=8;AF=0.160;AN=50;BaseQRankSum=-1.184;DP=401;FS=6.404;HRun=0;HaplotypeScore=99.2532;InbreedingCoeff=0.5167;MQ=43.56;MQ0=35;MQRankSum=2.371;QD=9.69;ReadPosRankSum=0.093;VQSLOD=1.7334;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:36.12:0,36,859	0/0:3,0:3:6.02:0,6,124	./.	./.	0/0:16,0:13:8.70:0,9,218	0/0:20,0:18:19:0,19,426	0/0:30,0:24:9.74:0,10,306	0/0:14,0:13:0:0,0,0	0/0:12,0:10:15.05:0,15,303	0/0:19,0:15:24.06:0,24,484	0/0:9,0:8:9.03:0,9,204	1/1:17,0:17:19.18:362,19,0	0/0:17,0:15:23.67:0,24,426	0/0:11,0:10:7.27:0,7,149	0/0:15,0:15:15.43:0,15,314	0/0:17,0:16:17.93:0,18,361	0/0:20,0:18:21.07:0,21,488	0/0:9,0:8:12.04:0,12,282	0/0:8,0:7:3.01:0,3,33	1/1:5,8:12:3.01:49,3,0	0/1:21,0:17:1.82:280,0,2	0/0:18,0:17:18.06:0,18,444	./.	0/0:31,0:28:33.11:0,33,812	0/0:13,0:12:15.05:0,15,357	0/0:16,0:16:35.41:0,35,654	1/1:7,0:7:2.89:61,3,0	0/1:8,0:6:34.96:35,0,166
chr10	107655738	.	TCACA	T	1798.84	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.853;DP=712;FS=10.643;HRun=0;HaplotypeScore=123.3388;InbreedingCoeff=0.9909;MQ=79.18;MQ0=0;MQRankSum=-5.039;QD=35.98;ReadPosRankSum=0.513;VQSLOD=3.4070;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,169,4469	1/1:3,5:8:15.05:208,15,0	0/0:20,0:20:53.79:0,54,1246	0/0:19,0:19:54.12:0,54,1257	0/0:19,0:19:54.16:0,54,1375	0/0:27,0:27:78.25:0,78,2064	0/0:28,0:28:84.27:0,84,2207	0/0:20,0:20:57.20:0,57,1457	0/0:31,0:31:84.27:0,84,2194	0/0:26,0:26:75.26:0,75,1930	0/0:13,0:13:36.12:0,36,985	1/1:6,36:42:99:1709,117,0	0/0:25,0:25:75.24:0,75,1947	0/0:24,0:24:69.24:0,69,1837	0/0:40,0:40:99:0,117,3157	0/0:32,0:32:93.32:0,93,2533	0/0:35,0:35:99:0,105,2782	0/0:27,0:27:78.27:0,78,2122	0/0:21,0:21:59.76:0,60,1581	0/0:19,0:19:57.20:0,57,1545	0/0:43,0:43:99:0,117,3103	0/0:19,0:19:54.19:0,54,1477	0/0:12,0:12:33.10:0,33,828	0/0:35,0:34:99:0,105,2874	0/0:12,0:12:33.11:0,33,904	0/0:26,0:26:78.27:0,78,2110	0/0:22,0:22:66.23:0,66,1733	0/0:9,0:9:27.09:0,27,716
chr10	107655745	.	G	GT	1413.56	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.644;DP=705;FS=10.364;HRun=0;HaplotypeScore=81.0974;InbreedingCoeff=0.9944;MQ=79.31;MQ0=0;MQRankSum=-4.852;QD=29.45;ReadPosRankSum=0.171;VQSLOD=2.6977;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,169,2330	1/1:2,5:7:17.99:177,18,0	0/0:20,0:20:60.14:0,60,795	0/0:20,0:20:57.09:0,57,691	0/0:18,0:18:48.16:0,48,671	0/0:25,0:25:75.25:0,75,1048	0/0:34,0:34:99:0,99,1383	0/0:18,0:18:54.17:0,54,741	0/0:27,0:27:81.26:0,81,1116	0/0:23,0:23:66.16:0,66,887	0/0:14,0:14:36.12:0,36,504	1/1:3,38:41:99:1357,120,0	0/0:24,0:24:72.24:0,72,1007	0/0:21,0:21:60.20:0,60,839	0/0:38,0:38:99:0,114,1575	0/0:34,0:34:99:0,102,1410	0/0:35,0:35:99:0,102,1427	0/0:26,0:26:78.26:0,78,1091	0/0:23,0:23:66.18:0,66,907	0/0:19,0:19:57.19:0,57,797	0/0:42,0:42:99:0,123,1719	0/0:20,0:20:57.18:0,57,781	0/0:11,0:11:33.10:0,33,443	0/0:36,0:35:99:0,108,1511	0/0:12,0:12:33.11:0,33,461	0/0:27,0:27:81.27:0,81,1133	0/0:22,0:22:66.22:0,66,923	0/0:8,0:8:24.08:0,24,333
chr10	107657122	.	TAC	T	1143.14	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.916;DP=945;FS=0.669;HRun=0;HaplotypeScore=113.0040;InbreedingCoeff=0.8454;MQ=61.43;MQ0=2;MQRankSum=1.190;QD=30.90;ReadPosRankSum=2.707;VQSLOD=5.6931;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:84.24:0,84,1395	0/0:23,0:23:66.23:0,66,1133	0/0:8,1:6:8.72:0,9,150	0/0:13,0:6:5.27:0,5,91	0/0:32,0:32:93.32:0,93,1605	0/0:27,0:27:78.27:0,78,1350	0/0:20,0:20:57.20:0,57,982	0/0:42,0:42:99:0,114,1940	0/0:26,0:26:75.24:0,75,1270	0/0:66,0:66:99:0,184,3123	0/0:35,0:35:93.29:0,93,1556	1/1:2,35:36:93.31:1238,93,0	0/0:37,0:37:99:0,102,1729	0/0:37,0:37:99:0,105,1738	0/0:61,0:61:99:0,163,2669	0/0:37,0:37:99:0,108,1816	0/0:26,0:26:69.15:0,69,1130	0/0:28,0:28:63.13:0,63,1028	0/0:19,0:19:57.20:0,57,980	0/0:49,0:49:99:0,141,2383	0/0:38,0:38:96.28:0,96,1580	0/0:32,0:32:87.30:0,87,1506	0/0:43,0:43:99:0,117,2023	0/0:18,0:18:42.14:0,42,706	0/0:23,0:23:63.22:0,63,1081	0/0:61,0:61:99:0,160,2643	0/0:34,0:34:96.25:0,96,1570	0/0:38,0:38:99:0,108,1820
chr10	107657327	.	TAC	T	1117.31	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.695;DP=883;FS=0.000;HRun=0;HaplotypeScore=123.9958;InbreedingCoeff=0.9718;MQ=69.76;MQ0=5;MQRankSum=-0.199;QD=23.77;ReadPosRankSum=1.809;VQSLOD=4.1333;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:67.73:0,68,1176	1/1:0,13:13:24.03:367,24,0	0/0:17,0:8:9.47:0,9,101	0/0:47,0:27:28.81:0,29,460	0/0:39,0:39:99:0,114,2131	0/0:28,0:28:84.26:0,84,1535	0/0:15,0:15:42.13:0,42,766	0/0:40,0:40:99:0,114,2029	0/0:32,0:32:96.28:0,96,1701	0/0:71,0:71:99:0,214,3853	0/0:30,0:30:90.25:0,90,1634	1/1:0,34:33:57.07:872,57,0	0/0:31,0:31:93.29:0,93,1695	0/0:27,0:27:75.23:0,75,1372	0/0:45,0:45:99:0,135,2520	0/0:31,0:31:93.27:0,93,1652	0/0:20,0:20:51.13:0,51,897	0/0:20,0:20:57.03:0,57,915	0/0:25,0:24:69.18:0,69,1169	0/0:43,0:43:99:0,126,2361	0/0:23,0:23:66.62:0,67,1145	0/0:38,0:37:99:0,111,2037	0/0:30,0:30:87.28:0,87,1635	0/0:16,0:16:36.04:0,36,589	0/0:22,0:22:63.20:0,63,1182	0/0:54,0:53:99:0,160,2961	0/0:30,0:29:90.31:0,90,1720	0/0:26,0:26:72.25:0,72,1377
chr10	107657599	.	ATT	A	857.25	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.904;DP=722;FS=10.396;HRun=2;HaplotypeScore=91.2397;InbreedingCoeff=0.9300;MQ=59.48;MQ0=3;MQRankSum=2.391;QD=31.75;ReadPosRankSum=2.535;VQSLOD=2.7494;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.03:0,90,1551	1/1:0,8:8:21.07:342,21,0	0/0:12,1:6:18.03:0,18,263	0/0:8,0:2:5.70:0,6,29	0/0:30,0:30:90.29:0,90,1780	0/0:21,0:21:63.17:0,63,1118	0/0:5,0:5:15.05:0,15,280	0/0:53,0:52:99:0,157,3084	0/0:33,0:33:99:0,99,1921	0/0:49,0:49:99:0,147,2899	0/0:28,0:28:84.25:0,84,1636	1/1:1,18:19:38.87:635,39,0	0/0:26,0:26:78.27:0,78,1584	0/0:30,0:30:90.29:0,90,1732	0/0:29,0:29:87.28:0,87,1703	0/0:28,0:28:84.29:0,84,1706	0/0:30,0:30:62.16:0,62,1490	0/0:38,2:40:19.93:0,20,1914	0/0:19,0:17:54.18:0,54,1042	0/0:31,0:31:93.29:0,93,1797	0/0:23,0:23:66.18:0,66,1263	0/0:23,0:23:69.24:0,69,1401	0/0:15,0:15:45.15:0,45,900	0/0:23,0:23:60.21:0,60,1216	0/0:29,0:29:87.25:0,87,1598	0/0:37,0:37:99:0,111,2075	0/0:22,0:22:66.23:0,66,1297	0/0:19,0:19:57.19:0,57,1134
chr10	107659638	.	C	CAGGG	628.75	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=-2.687;DP=370;FS=12.348;HRun=0;HaplotypeScore=62.7785;InbreedingCoeff=0.7824;MQ=81.27;MQ0=3;MQRankSum=-0.815;QD=34.93;ReadPosRankSum=0.699;VQSLOD=2.3851;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:36.11:0,36,575	1/1:3,0:3:3.01:74,3,0	0/0:18,0:14:12.03:0,12,157	0/0:32,0:22:14.11:0,14,435	0/0:11,0:11:24.07:0,24,376	0/0:10,0:10:24.08:0,24,401	0/0:23,0:23:48.05:0,48,692	0/0:6,0:6:6:0,6,73	0/0:11,0:11:30.08:0,30,451	0/0:18,0:18:39.13:0,39,631	0/0:6,0:6:18.04:0,18,256	1/1:4,11:15:27.09:662,27,0	0/0:8,0:8:21.07:0,21,351	0/0:13,0:13:30.09:0,30,476	0/0:15,0:15:29.74:0,30,412	0/0:17,0:17:33.07:0,33,517	0/0:17,0:17:24.07:0,24,374	0/0:12,0:12:20.58:0,21,350	0/0:8,0:8:12.04:0,12,177	0/0:5,0:5:15.03:0,15,202	0/0:36,0:36:51.04:0,51,761	0/0:8,0:8:18.06:0,18,294	0/0:10,0:10:18.06:0,18,301	0/0:16,0:16:27.09:0,27,449	0/0:10,0:10:24.08:0,24,401	0/0:8,0:8:18.06:0,18,301	0/0:8,0:8:18.06:0,18,301	./.
chr10	107659743	.	AGGGT	A	121.41	PASS	AC=4;AF=0.095;AN=42;BaseQRankSum=1.445;DP=90;FS=17.864;HRun=0;HaplotypeScore=26.5395;InbreedingCoeff=0.3145;MQ=100.41;MQ0=0;MQRankSum=-1.902;QD=11.04;ReadPosRankSum=0.867;VQSLOD=0.7124;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:15.05:0,15,337	1/1:0,4:4:3.01:54,3,0	0/0:5,0:5:14.17:0,14,163	0/0:13,0:11:11.63:0,12,90	./.	0/0:4,0:4:9.03:0,9,207	./.	0/0:2,0:2:2.98:0,3,21	0/0:3,0:3:4.51:0,5,23	0/0:2,0:2:6.02:0,6,134	./.	1/1:1,6:7:9.03:162,9,0	0/0:1,0:1:3.01:0,3,49	0/0:2,0:2:6.01:0,6,103	0/0:5,0:5:12.04:0,12,281	0/0:3,0:3:6.02:0,6,156	./.	./.	0/0:3,0:3:3.52:0,4,152	0/0:2,0:2:6.02:0,6,147	0/0:5,0:5:9.03:0,9,226	0/0:4,0:4:3.01:0,3,69	./.	0/0:3,0:3:2.99:0,3,24	0/0:5,0:5:9.03:0,9,230	0/0:4,0:4:9.03:0,9,230	0/0:2,0:2:3:0,3,25	./.
chr10	107660369	.	A	AT	840.38	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.680;DP=712;FS=1.537;HRun=7;HaplotypeScore=67.3571;InbreedingCoeff=0.9975;MQ=76.93;MQ0=0;MQRankSum=-1.997;QD=24.72;ReadPosRankSum=-0.482;VQSLOD=3.7602;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,938	1/1:2,8:10:21.02:237,21,0	0/0:21,0:21:31.19:0,31,434	0/0:21,0:21:38.98:0,39,366	0/0:26,0:26:60.03:0,60,568	0/0:25,0:25:72.08:0,72,683	0/0:23,0:23:63.08:0,63,603	0/0:25,0:25:69.07:0,69,649	0/0:20,0:20:48.07:0,48,463	0/0:32,0:32:87.09:0,87,823	0/0:25,0:25:72.02:0,72,666	1/1:2,22:24:60.18:724,60,0	0/0:27,0:27:66.08:0,66,632	0/0:24,0:24:72.11:0,72,694	0/0:30,0:30:81.10:0,81,771	0/0:31,0:31:87.09:0,87,820	0/0:40,0:40:99:0,111,1058	0/0:30,0:30:87.14:0,87,840	0/0:16,0:17:39.03:0,39,363	0/0:33,0:33:90.13:0,90,863	0/0:19,0:19:57.09:0,57,550	0/0:26,0:26:75.12:0,75,724	0/0:25,0:25:69.02:0,69,644	0/0:26,0:26:72.06:0,72,681	0/0:30,0:30:84.10:0,84,799	0/0:25,0:25:57.06:0,57,542	0/0:30,0:30:75.06:0,75,705	0/0:12,0:12:33.05:0,33,319
chr10	107661033	.	ATGCAGGGG	A	2531.52	PASS	AB=0.863;AC=14;AF=0.250;AN=56;BaseQRankSum=10.082;DP=531;FS=4.832;HRun=0;HaplotypeScore=147.6618;InbreedingCoeff=0.8271;MQ=70.40;MQ0=2;MQRankSum=-6.445;QD=14.63;ReadPosRankSum=-0.596;VQSLOD=2.4541;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:54.19:0,54,2089	1/1:11,0:11:20.17:389,20,0	0/1:19,0:17:19.93:20,0,192	0/0:17,0:16:7.10:0,7,72	0/0:17,0:17:24.08:0,24,917	0/0:18,0:18:36.12:0,36,1366	0/0:28,0:28:45.15:0,45,1589	1/1:10,5:15:12.03:236,12,0	0/0:23,0:23:42.14:0,42,1629	0/0:14,0:14:27.09:0,27,991	0/0:17,0:17:27.09:0,27,1020	1/1:29,0:29:41.15:689,41,0	0/0:12,0:12:33.10:0,33,1211	0/0:27,0:27:69.24:0,69,2393	0/0:13,0:13:21.07:0,21,831	0/0:13,0:13:21.07:0,21,856	0/0:27,0:27:30.10:0,30,1221	0/0:19,0:19:33.11:0,33,1297	1/1:10,5:14:12.01:181,12,0	1/1:7,6:13:12.04:304,12,0	0/1:36,15:51:0:0,0,0	0/0:13,0:13:21.07:0,21,790	0/0:11,0:11:15.05:0,15,506	0/0:19,0:19:36.12:0,36,1260	0/0:12,0:12:21.07:0,21,867	0/0:14,0:13:18.06:0,18,715	1/1:2,17:19:35.87:894,36,0	0/0:10,0:10:12.04:0,12,496
chr10	107661044	.	CAGGGGTGCAGGGGTG	C	2243.40	PASS	AB=0.667;AC=3;AF=0.054;AN=56;BaseQRankSum=8.357;DP=509;FS=2.625;HRun=0;HaplotypeScore=213.1820;InbreedingCoeff=0.5992;MQ=69.37;MQ0=2;MQRankSum=-6.989;QD=57.52;ReadPosRankSum=2.578;VQSLOD=3.6008;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,5253	1/1:4,7:11:10.10:825,10,0	0/0:20,0:17:39.17:0,39,1330	0/0:19,0:17:50.96:0,51,1101	0/0:12,0:12:33.11:0,33,2006	0/0:20,0:20:60.20:0,60,3253	0/0:26,0:26:75.25:0,75,3823	0/0:12,0:12:33.11:0,33,775	0/0:21,0:21:60.19:0,60,3522	0/0:12,0:12:36.12:0,36,2270	0/0:16,0:16:48.15:0,48,2511	0/1:14,14:28:48.90:1516,0,49	0/0:14,0:14:39.13:0,39,2621	0/0:30,0:30:90.29:0,90,5371	0/0:17,0:17:51.17:0,51,2601	0/0:13,0:13:39.13:0,39,2066	0/0:25,0:25:75.22:0,75,3231	0/0:15,0:15:45.15:0,45,2804	0/0:16,0:15:42.11:0,42,937	0/0:10,0:10:21.07:0,21,397	0/0:45,0:45:65.02:0,65,1404	0/0:13,0:13:39.13:0,39,2055	0/0:10,0:10:30.10:0,30,1383	0/0:19,0:19:57.17:0,57,2993	0/0:11,0:11:33.11:0,33,2009	0/0:17,0:16:48.16:0,48,2220	0/0:18,0:18:38.93:0,39,738	0/0:6,0:6:18.06:0,18,1135
chr10	107662671	.	TA	T	1280.19	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=6.510;DP=438;FS=3.585;HRun=12;HaplotypeScore=52.4040;InbreedingCoeff=0.7895;MQ=65.45;MQ0=1;MQRankSum=0.539;QD=13.20;ReadPosRankSum=-1.255;VQSLOD=3.3062;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:14:23.88:0,24,227	0/0:8,0:8:20.71:0,21,142	0/0:4,0:1:0:0,0,0	0/1:9,0:8:3.65:4,0,85	0/0:24,0:25:56.93:0,57,551	0/0:13,1:14:12.83:0,13,312	0/0:13,0:14:17.52:0,18,322	1/1:7,22:31:67.13:501,67,0	0/0:19,0:19:50.96:0,51,495	0/0:13,1:14:12.79:0,13,302	0/0:10,2:13:0.65:0,1,174	0/0:3,0:8:19.93:0,20,99	0/0:17,1:19:24.67:0,25,401	0/0:11,1:13:9.66:0,10,265	0/0:9,1:10:3.80:0,4,214	0/0:11,0:11:27.04:0,27,268	0/0:37,1:38:75.89:0,76,922	0/0:22,0:23:56.95:0,57,562	1/1:2,11:14:34.90:261,35,0	1/1:3,9:13:28.93:215,29,0	1/1:5,8:13:20.91:162,21,0	0/0:16,0:16:33.07:0,33,335	0/0:20,1:21:30.87:0,31,489	0/0:11,0:11:24.04:0,24,238	0/0:19,0:19:51.10:0,51,518	0/0:20,1:21:21.82:0,22,388	1/1:2,13:16:40.88:308,41,0	0/0:6,0:6:18.04:0,18,183
chr10	107662907	.	TTTGTTGAG	T	1045.36	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=5.570;DP=428;FS=0.000;HRun=0;HaplotypeScore=111.9289;InbreedingCoeff=0.7919;MQ=68.32;MQ0=1;MQRankSum=-5.498;QD=26.80;ReadPosRankSum=-0.064;VQSLOD=3.1246;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.28:0,81,3432	1/1:2,6:8:18.06:499,18,0	0/0:16,0:12:30.08:0,30,878	0/1:16,0:7:0.69:1,0,208	0/0:20,0:20:54.19:0,54,1935	0/0:23,0:23:57.19:0,57,2342	0/0:15,0:15:42.14:0,42,1706	0/0:27,0:27:69.24:0,69,2479	0/0:13,0:13:36.12:0,36,1483	0/0:13,0:13:36.12:0,36,1539	0/0:13,0:13:36.12:0,36,1504	1/1:5,10:15:24.08:665,24,0	0/0:9,0:9:27.09:0,27,1048	0/0:15,0:15:42.14:0,42,1759	0/0:19,0:18:57.20:0,57,2379	0/0:21,0:21:63.22:0,63,2579	0/0:27,0:27:81.28:0,81,3320	0/0:15,0:15:45.15:0,45,1680	0/0:14,0:14:27.09:0,27,959	0/0:16,0:16:45.15:0,45,1857	0/0:11,0:11:24.08:0,24,907	0/0:9,0:9:24.08:0,24,936	0/0:8,0:8:21.07:0,21,910	0/0:14,0:14:39.13:0,39,1598	0/0:6,0:6:18.04:0,18,641	0/0:18,0:18:48.16:0,48,1989	0/0:18,0:18:48.16:0,48,1965	0/0:1,0:1:3.01:0,3,130
chr10	107662932	.	AAGAG	A	1713.45	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.231;DP=457;FS=3.179;HRun=0;HaplotypeScore=77.7234;InbreedingCoeff=0.9138;MQ=63.54;MQ0=12;MQRankSum=0.545;QD=23.47;ReadPosRankSum=0.261;VQSLOD=3.3279;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:29:69.06:0,69,1458	0/0:10,0:10:13.04:0,13,112	0/0:35,0:12:18.05:0,18,314	0/0:55,0:13:15.67:0,16,132	0/0:15,0:15:36.12:0,36,885	0/0:21,0:21:45.10:0,45,889	0/0:11,0:12:20.81:0,21,457	1/1:11,11:22:33.10:510,33,0	0/0:12,0:12:30.09:0,30,690	0/0:13,0:12:24.07:0,24,497	0/0:11,0:11:24.07:0,24,544	0/0:14,0:14:26.69:0,27,463	0/0:13,0:13:24.07:0,24,543	0/0:12,0:12:24.08:0,24,562	0/0:19,0:18:42.14:0,42,936	0/0:18,0:18:48.15:0,48,1111	0/0:23,0:25:47.63:0,48,990	0/0:12,0:12:24.08:0,24,555	1/1:3,3:6:9.03:149,9,0	1/1:3,16:18:39.06:593,39,0	1/1:2,8:10:9.03:150,9,0	0/0:6,0:7:14.79:0,15,273	0/0:9,0:9:21.04:0,21,421	0/0:12,0:12:27.09:0,27,657	0/0:9,0:9:24:0,24,536	0/0:18,0:18:38.85:0,39,772	1/1:6,10:16:30.09:477,30,0	0/0:2,0:2:3.01:0,3,74
chr10	107662980	.	G	GAA	92.21	PASS	AB=0.760;AC=2;AF=0.036;AN=56;BaseQRankSum=5.919;DP=422;FS=4.296;HRun=0;HaplotypeScore=62.3642;InbreedingCoeff=-0.0433;MQ=59.76;MQ0=12;MQRankSum=-4.625;QD=4.19;ReadPosRankSum=0.213;VQSLOD=1.9873;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:43.51:0,44,887	0/1:8,3:10:68.15:94,0,68	0/0:32,0:6:18.06:0,18,273	0/0:54,0:21:11.85:0,12,520	0/0:9,0:9:21.06:0,21,318	0/0:19,0:19:54.18:0,54,877	0/0:18,0:18:50.70:0,51,805	0/0:24,0:24:69.19:0,69,1068	0/0:17,0:17:51.17:0,51,831	0/0:10,0:10:30.10:0,30,486	0/0:9,0:9:24.04:0,24,362	0/1:7,4:11:62:87,0,62	0/0:13,0:13:39.12:0,39,612	0/0:5,0:5:15.05:0,15,241	0/0:9,0:9:27.06:0,27,391	0/0:14,0:14:42.13:0,42,659	0/0:14,0:14:42.13:0,42,660	0/0:12,0:12:9.23:0,9,484	0/0:6,0:6:15:0,15,208	0/0:16,0:16:36.09:0,36,538	0/0:15,0:15:33.10:0,33,512	0/0:12,0:12:36.11:0,36,564	0/0:11,0:11:30.10:0,30,489	0/0:13,0:13:36.12:0,36,581	0/0:15,0:15:42.13:0,42,658	0/0:10,0:10:27.09:0,27,439	0/0:14,0:14:42.14:0,42,677	0/0:6,0:4:12.04:0,12,196
chr10	107662981	.	G	GGAAGAAAGGA	1033.69	PASS	AB=0.733;AC=3;AF=0.054;AN=56;BaseQRankSum=5.555;DP=423;FS=0.965;HRun=0;HaplotypeScore=118.9563;InbreedingCoeff=0.6101;MQ=61.16;MQ0=12;MQRankSum=-3.811;QD=46.99;ReadPosRankSum=0.862;VQSLOD=3.5621;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:58.42:0,58,1745	1/1:8,0:10:2.73:502,3,0	0/0:30,0:6:13.06:0,13,382	0/0:52,0:21:26.36:0,26,883	0/0:10,0:10:24.05:0,24,623	0/0:18,0:18:54.19:0,54,1618	0/0:18,0:18:54.17:0,54,1740	0/0:25,0:25:69.23:0,69,1862	0/0:17,0:17:51.18:0,51,1723	0/0:10,0:10:30.10:0,30,836	0/0:9,0:9:24.03:0,24,605	0/1:7,4:11:2.54:623,0,3	0/0:13,0:13:36.12:0,36,1216	0/0:5,0:5:15.03:0,15,366	0/0:9,0:9:27.07:0,27,766	0/0:14,0:14:42.12:0,42,1245	0/0:14,0:14:39.13:0,39,1241	0/0:13,0:13:33.06:0,33,916	0/0:6,0:6:15.01:0,15,323	0/0:17,0:17:36.11:0,36,950	0/0:15,0:15:33.01:0,33,942	0/0:12,0:12:36.11:0,36,1092	0/0:11,0:11:30.10:0,30,968	0/0:13,0:13:36.12:0,36,1115	0/0:15,0:15:45.10:0,45,1201	0/0:10,0:10:30.09:0,30,892	0/0:14,0:14:42.09:0,42,1137	0/0:6,0:4:12.04:0,12,414
chr10	107663857	.	AGGAAAGGTGTTT	A	3113.74	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.834;DP=830;FS=3.415;HRun=0;HaplotypeScore=275.6649;InbreedingCoeff=0.9999;MQ=85.97;MQ0=1;MQRankSum=-9.052;QD=88.96;ReadPosRankSum=1.879;VQSLOD=3.2957;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:65:99:0,190,10975	1/1:1,15:16:42.14:1560,42,0	0/0:31,0:31:87.29:0,87,3983	0/0:25,0:24:69.19:0,69,3450	0/0:20,0:20:54.17:0,54,2847	0/0:34,0:34:99:0,102,5919	0/0:30,0:30:87.30:0,87,4885	0/0:34,0:34:96.33:0,96,5313	0/0:26,0:26:75.26:0,75,4503	0/0:35,0:35:99:0,99,5475	0/0:23,0:23:66.23:0,66,3955	1/1:3,16:19:45.15:1675,45,0	0/0:31,0:31:93.32:0,93,5403	0/0:35,0:35:99:0,105,6399	0/0:33,0:33:99:0,99,5941	0/0:29,0:29:81.27:0,81,4355	0/0:33,0:32:93.29:0,93,5286	0/0:29,0:29:87.30:0,87,5147	0/0:30,0:30:84.29:0,84,4864	0/0:29,0:29:84.29:0,84,4850	0/0:55,0:55:99:0,154,8862	0/0:26,0:26:72.22:0,72,3850	0/0:20,0:20:60.21:0,60,3468	0/0:30,0:30:78.27:0,78,4647	0/0:29,0:29:84.28:0,84,4843	0/0:26,0:26:75.25:0,75,4111	0/0:24,0:24:69.24:0,69,4111	0/0:13,0:13:39.13:0,39,2342
chr10	107664331	.	T	TTTA	954.20	PASS	AB=0.517;AC=3;AF=0.054;AN=56;BaseQRankSum=4.932;DP=611;FS=0.000;HRun=0;HaplotypeScore=93.5825;InbreedingCoeff=0.6726;MQ=63.25;MQ0=0;MQRankSum=-1.236;QD=25.79;ReadPosRankSum=1.081;VQSLOD=3.6312;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,115,1655	0/1:1,0:15:10.64:286,0,11	0/0:13,0:13:25.61:0,26,267	0/0:8,0:7:13.94:0,14,161	0/0:26,0:26:52.96:0,53,883	0/0:16,0:16:45.06:0,45,591	0/0:14,0:14:39.10:0,39,542	0/0:27,0:27:66.53:0,67,862	0/0:26,0:26:77.53:0,78,970	0/0:27,0:27:81.24:0,81,1165	0/0:22,0:22:53.20:0,53,688	1/1:0,18:22:36.12:775,36,0	0/0:15,0:15:42.08:0,42,591	0/0:21,0:21:60:0,60,776	0/0:25,0:25:75.16:0,75,1033	0/0:23,0:23:69.19:0,69,1007	0/0:31,0:31:85.82:0,86,1202	0/0:30,0:30:89.58:0,90,1131	0/0:17,0:17:51.06:0,51,620	0/0:29,0:29:78.09:0,78,1094	0/0:16,0:16:42.07:0,42,528	0/0:21,0:21:60.11:0,60,818	0/0:23,0:23:62.96:0,63,747	0/0:24,0:24:69.13:0,69,918	0/0:20,0:20:51.05:0,51,666	0/0:21,0:21:63.15:0,63,855	0/0:26,0:26:75.19:0,75,1094	0/0:9,0:9:24.95:0,25,336
chr10	107665584	.	T	TGTTTCAA	13729.59	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-2.036;DP=683;FS=24.049;HRun=0;HaplotypeScore=157.0346;InbreedingCoeff=0.9995;MQ=67.35;MQ0=0;MQRankSum=-14.548;QD=87.45;ReadPosRankSum=-3.600;VQSLOD=3.2326;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,3365	1/1:2,10:12:36.12:1411,36,0	0/0:30,0:30:84.26:0,84,1885	0/0:27,0:25:68.82:0,69,1641	0/0:15,0:15:35.71:0,36,855	0/0:17,0:17:45.14:0,45,1078	0/0:24,0:24:69.24:0,69,1746	1/1:13,13:34:84.26:2698,84,0	0/0:38,0:38:99:0,108,2670	0/0:24,0:25:72.24:0,72,1724	0/0:10,0:10:24.08:0,24,623	1/1:9,14:24:66.23:2457,66,0	0/0:20,0:20:60.16:0,60,1501	0/0:23,0:23:63.17:0,63,1541	0/0:31,0:31:90.28:0,90,2193	0/0:28,0:28:84.29:0,84,2128	0/0:32,0:32:92.35:0,92,2219	0/0:29,0:29:81.28:0,81,2020	1/1:14,4:20:45.15:1434,45,0	1/1:3,13:18:48.12:1756,48,0	1/1:4,15:22:47.86:1655,48,0	0/0:22,0:22:63.22:0,63,1636	0/0:11,0:11:30.07:0,30,694	0/0:43,0:43:99:0,123,3176	0/0:21,0:21:57.20:0,57,1435	0/0:21,0:21:60.19:0,60,1474	1/1:5,14:23:60.21:2319,60,0	0/0:12,0:12:36.12:0,36,925
chr10	107667534	.	T	TA	1017.34	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.877;DP=555;FS=4.947;HRun=3;HaplotypeScore=57.7426;InbreedingCoeff=0.9809;MQ=87.08;MQ0=0;MQRankSum=-3.928;QD=29.92;ReadPosRankSum=0.393;VQSLOD=3.0660;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1332	1/1:0,7:7:12.04:168,12,0	0/0:21,0:21:54.16:0,54,637	0/0:17,0:17:41.99:0,42,480	0/0:12,0:12:33.10:0,33,396	0/0:14,0:14:42.13:0,42,503	0/0:17,0:17:48.13:0,48,564	0/0:24,0:24:60.18:0,60,719	0/0:20,0:20:54.17:0,54,647	0/0:30,0:30:89.86:0,90,1054	0/0:8,0:8:24.07:0,24,288	1/1:2,25:27:69.23:966,69,0	0/0:19,0:19:51.16:0,51,612	0/0:22,0:22:63.18:0,63,744	0/0:21,0:21:63.18:0,63,744	0/0:13,0:13:36.09:0,36,418	0/0:37,0:37:99:0,111,1282	0/0:24,0:24:66.20:0,66,792	0/0:19,0:19:54.16:0,54,647	0/0:11,0:11:24.07:0,24,288	0/0:33,0:33:84.26:0,84,1008	0/0:12,0:12:36.11:0,36,432	0/0:14,0:14:36.11:0,36,432	0/0:27,0:27:78.22:0,78,923	0/0:18,0:18:54.17:0,54,648	0/0:21,0:21:63.16:0,63,725	0/0:20,0:20:54.15:0,54,635	0/0:9,0:9:27.07:0,27,311
chr10	107667886	.	C	CAGGGCGAAGGA	11453.37	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=0.930;DP=496;FS=19.993;HRun=0;HaplotypeScore=170.1076;InbreedingCoeff=0.9816;MQ=86.08;MQ0=0;MQRankSum=-12.894;QD=107.04;ReadPosRankSum=-1.080;VQSLOD=3.5686;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:93.29:0,93,2886	1/1:3,1:4:12.04:525,12,0	0/0:13,0:13:38.34:0,38,1239	0/0:23,0:24:54.02:0,54,1386	0/0:12,0:12:30.10:0,30,936	0/0:23,0:23:57.18:0,57,1912	0/0:35,0:35:99:0,99,3158	1/1:17,1:21:51.13:2272,51,0	0/0:18,0:18:51.16:0,51,1668	0/0:21,0:21:51.17:0,51,1709	0/0:12,0:12:27.09:0,27,921	1/1:12,13:26:66.22:3291,66,0	0/0:13,0:13:39.13:0,39,1294	0/0:23,0:23:63.20:0,63,2069	0/0:24,0:24:72.25:0,72,2456	0/0:11,0:11:27.08:0,27,841	0/0:30,0:30:87.28:0,87,2936	0/0:27,0:27:75.19:0,75,2443	1/1:7,1:9:24.04:999,24,0	1/1:4,4:10:23.73:1011,24,0	1/1:13,4:20:24.08:998,24,0	0/0:3,0:3:9.03:0,9,278	0/0:11,0:11:33.11:0,33,1097	0/0:23,0:23:66.20:0,66,2161	0/0:12,0:12:36.12:0,36,1240	0/0:9,0:9:24.08:0,24,830	1/1:7,9:16:45.15:2357,45,0	0/0:9,0:9:27.09:0,27,889
chr10	107668332	.	TC	T	500.70	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.125;DP=422;FS=0.000;HRun=2;HaplotypeScore=43.5682;InbreedingCoeff=0.8895;MQ=86.70;MQ0=0;MQRankSum=-1.796;QD=27.82;ReadPosRankSum=1.217;VQSLOD=3.0889;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.23:0,72,1054	1/1:1,4:5:15.05:193,15,0	0/0:11,0:11:29.93:0,30,373	0/0:19,0:19:54:0,54,649	0/0:9,0:9:21.07:0,21,314	0/0:5,0:5:12.04:0,12,176	0/0:21,0:21:57.16:0,57,827	0/0:25,0:25:68.72:0,69,881	0/0:18,0:18:54.17:0,54,781	0/0:9,0:9:27.08:0,27,387	0/0:3,0:3:9.02:0,9,117	1/1:3,10:13:33.11:426,33,0	0/0:11,0:11:30.06:0,30,419	0/0:13,0:13:36.10:0,36,500	0/0:20,0:20:60.16:0,60,869	0/0:12,0:12:36.08:0,36,513	0/0:30,0:30:90.27:0,90,1305	0/0:34,0:34:93.23:0,93,1336	0/0:8,0:8:21.01:0,21,268	0/0:13,0:13:30.02:0,30,399	0/0:33,0:33:93.17:0,93,1278	0/0:7,0:6:18.06:0,18,269	0/0:7,0:7:21.07:0,21,314	0/0:33,0:33:96.28:0,96,1408	0/0:13,0:13:39.11:0,39,563	0/0:11,0:11:30.04:0,30,388	0/0:11,0:11:33.11:0,33,489	0/0:3,0:3:6.02:0,6,90
chr10	107668392	.	G	GCT	5741.33	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-12.000;DP=478;FS=5.815;HRun=0;HaplotypeScore=54.8969;InbreedingCoeff=0.9638;MQ=65.21;MQ0=1;MQRankSum=-0.661;QD=45.57;ReadPosRankSum=-0.584;VQSLOD=5.8213;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.26:0,78,1145	1/1:2,4:6:15.02:246,15,0	0/0:14,0:10:26.55:0,27,389	0/0:12,0:12:30.10:0,30,435	0/0:15,0:15:45.15:0,45,663	0/0:19,0:21:54.18:0,54,794	0/0:23,0:23:69.23:0,69,1007	1/1:2,14:15:39.12:662,39,0	0/0:21,0:21:63.21:0,63,919	0/0:9,0:9:27.06:0,27,358	0/0:10,0:10:30.09:0,30,412	1/1:1,16:18:51.17:946,51,0	0/0:9,0:9:27.09:0,27,397	0/0:15,0:15:42.14:0,42,618	0/0:16,0:16:45.14:0,45,643	0/0:8,0:8:24.07:0,24,334	0/0:33,0:33:93.27:0,93,1326	0/0:32,0:33:87.25:0,87,1257	1/1:0,16:14:42.12:686,42,0	1/1:1,8:9:21.07:393,21,0	1/1:1,43:44:99:2078,111,0	0/0:16,0:16:48.16:0,48,707	0/0:13,0:13:36.12:0,36,527	0/0:30,0:30:87.24:0,87,1218	0/0:10,0:10:30.10:0,30,441	0/0:15,0:15:45.14:0,45,639	1/1:1,15:17:39.13:730,39,0	0/0:2,0:2:3.01:0,3,44
chr10	107668511	.	A	AGAG	4179.15	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=3.444;DP=514;FS=9.049;HRun=0;HaplotypeScore=84.8766;InbreedingCoeff=0.8873;MQ=60.87;MQ0=9;MQRankSum=-1.720;QD=38.70;ReadPosRankSum=0.640;VQSLOD=4.4524;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:87.08:0,87,1480	0/1:6,0:6:30.35:156,0,30	0/0:46,0:15:27.77:0,28,427	0/0:54,0:18:16.81:0,17,210	0/0:25,0:25:75.25:0,75,1353	0/0:6,0:6:18.06:0,18,336	0/0:22,0:21:57.16:0,57,951	1/1:22,0:19:51.09:765,51,0	0/0:13,0:13:39.04:0,39,618	0/0:15,0:15:45.15:0,45,806	0/0:19,0:19:57.18:0,57,965	1/1:1,13:14:31.48:871,31,0	0/0:6,0:6:18.06:0,18,310	0/0:15,0:15:45.14:0,45,758	0/0:15,0:15:45.15:0,45,813	0/0:16,0:16:48.16:0,48,869	0/0:18,0:18:54.15:0,54,911	0/0:20,0:19:60.12:0,60,993	1/1:25,1:26:29.43:919,29,0	1/1:13,0:13:39.13:583,39,0	1/1:8,0:6:12.04:181,12,0	0/0:11,0:11:33.10:0,33,536	0/0:15,0:15:45.15:0,45,813	0/0:11,0:10:24.07:0,24,412	0/0:11,0:11:33.11:0,33,590	0/0:19,0:19:57.19:0,57,1019	1/1:18,1:18:21.53:704,22,0	0/0:16,0:16:45.15:0,45,783
chr10	107669057	.	CA	C	744.69	PASS	AB=0.805;AC=11;AF=0.212;AN=52;BaseQRankSum=3.668;DP=501;FS=0.558;HRun=13;HaplotypeScore=58.1367;InbreedingCoeff=0.4266;MQ=45.02;MQ0=38;MQRankSum=-1.432;QD=5.10;ReadPosRankSum=-1.714;VQSLOD=1.2843;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,3:40:50:0,50,611	0/0:6,0:6:3:0,3,25	./.	./.	0/0:30,1:29:17:0,17,293	0/0:19,0:18:42.02:0,42,396	0/0:14,2:12:9.57:0,10,262	0/1:11,19:24:1.69:314,0,2	0/0:22,0:19:38.98:0,39,361	0/0:15,0:12:18.02:0,18,171	0/0:14,1:14:30.05:0,30,290	0/0:12,0:10:11.86:0,12,101	0/0:13,0:10:16.57:0,17,147	0/0:14,0:12:21.03:0,21,204	0/1:14,1:14:3.88:4,0,128	0/0:9,0:7:15.02:0,15,146	0/0:27,1:27:30.99:0,31,449	0/0:36,0:32:60.01:0,60,566	1/1:10,13:16:9.59:227,10,0	0/1:7,6:12:20.24:35,0,20	1/1:5,7:9:14.91:109,15,0	0/1:15,1:14:10.85:11,0,72	0/0:9,0:10:14.86:0,15,129	0/0:21,0:19:20.81:0,21,294	0/1:15,2:15:22.98:23,0,115	0/0:14,2:12:4.96:0,5,187	1/1:9,10:18:23.12:174,23,0	0/0:19,0:14:24.04:0,24,234
chr10	107671313	.	A	ATTGT	2040.76	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=5.371;DP=246;FS=10.978;HRun=0;HaplotypeScore=50.6788;InbreedingCoeff=0.8216;MQ=68.26;MQ0=2;MQRankSum=-4.096;QD=44.36;ReadPosRankSum=-1.345;VQSLOD=2.4127;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:45.07:0,45,618	./.	0/1:8,0:6:2.75:3,0,245	0/0:10,0:9:23.16:0,23,327	0/0:6,0:6:5.31:0,5,88	0/0:13,0:13:27.03:0,27,374	0/0:17,0:17:42.07:0,42,523	1/1:4,3:7:21.07:528,21,0	0/0:12,0:12:36.12:0,36,555	0/0:10,0:9:24.08:0,24,406	0/0:5,0:5:15.03:0,15,191	0/0:7,0:7:20.98:0,21,244	0/0:6,0:6:12.04:0,12,179	0/0:7,0:7:18.05:0,18,287	0/0:8,0:8:23.93:0,24,290	0/0:5,0:5:15.05:0,15,218	0/0:18,0:18:32.99:0,33,447	0/0:11,0:11:30:0,30,445	1/1:3,3:6:12.04:305,12,0	1/1:2,5:7:15.05:343,15,0	1/1:0,8:9:15.05:342,15,0	0/0:7,0:7:10.35:0,10,176	0/0:5,0:5:8.94:0,9,112	0/0:10,0:10:15.05:0,15,211	0/0:12,0:12:30.10:0,30,460	0/0:13,0:13:36.12:0,36,599	1/1:0,9:9:27.09:687,27,0	0/0:3,0:3:6.02:0,6,101
chr10	107672795	.	GCACA	G	1762.30	PASS	AB=0.848;AC=9;AF=0.161;AN=56;BaseQRankSum=2.409;DP=641;FS=13.224;HRun=0;HaplotypeScore=123.3183;InbreedingCoeff=0.6276;MQ=61.12;MQ0=7;MQRankSum=0.316;QD=15.06;ReadPosRankSum=1.222;VQSLOD=2.8566;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:47.81:0,48,936	0/0:9,0:9:6:0,6,76	0/0:26,0:15:3.48:0,3,43	0/0:23,0:12:9.03:0,9,131	0/0:16,0:18:29.84:0,30,618	0/0:16,0:18:29.57:0,30,564	0/0:21,1:27:2.63:0,3,853	0/1:23,4:26:11.29:196,0,11	0/0:15,0:17:29.84:0,30,629	0/0:21,0:23:44.87:0,45,870	0/0:14,0:14:18.06:0,18,399	0/0:22,0:22:48.10:0,48,956	0/0:17,0:20:53.46:0,53,998	0/0:26,0:26:0.54:0,1,910	0/0:18,0:22:41.56:0,42,754	0/0:19,0:22:50.42:0,50,949	0/0:35,1:43:11.66:0,12,1088	0/0:17,0:21:41.35:0,41,738	1/1:10,1:11:6.01:76,6,0	1/1:4,10:15:18.06:274,18,0	1/1:28,16:44:53.67:985,54,0	0/0:24,0:24:33.07:0,33,707	0/0:17,0:19:20.65:0,21,345	0/0:44,0:49:89.78:0,90,1907	0/0:16,0:17:29.49:0,29,528	0/0:21,0:22:39.53:0,40,750	1/1:4,10:17:2.87:378,3,0	0/0:5,0:7:11.76:0,12,194
chr10	107672830	.	C	CACACACAG	397.42	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=0.337;DP=728;FS=2.689;HRun=0;HaplotypeScore=216.2905;InbreedingCoeff=0.4454;MQ=55.61;MQ0=7;MQRankSum=-1.260;QD=8.28;ReadPosRankSum=-2.183;VQSLOD=2.6011;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:30:75.04:0,75,1303	1/1:2,6:9:2.84:134,3,0	0/0:24,0:10:22.81:0,23,194	0/0:23,0:13:26.18:0,26,282	0/0:19,0:19:25.79:0,26,813	0/0:22,0:21:35.63:0,36,867	0/0:33,0:33:87.06:0,87,1380	0/0:32,0:32:86.60:0,87,749	0/0:22,0:21:51.04:0,51,948	0/0:24,0:24:69.10:0,69,1227	0/0:15,0:15:35.97:0,36,598	0/1:39,0:39:99:355,0,656	0/0:24,0:25:71.78:0,72,1320	0/0:24,0:23:59.77:0,60,1189	0/0:28,0:28:72.07:0,72,1272	0/0:21,0:22:60.01:0,60,1132	0/0:35,0:35:89.75:0,90,1592	0/0:28,0:28:63.42:0,63,957	0/0:13,0:12:35.80:0,36,379	0/0:19,0:19:9.02:0,9,491	0/0:69,0:68:99:0,157,2080	0/0:21,0:21:54.02:0,54,991	0/0:17,0:17:35.98:0,36,474	0/0:54,0:54:99:0,156,2501	0/0:15,0:17:36.16:0,36,736	0/0:21,0:22:63:0,63,1069	0/0:27,0:27:65.50:0,66,882	0/0:14,0:14:26.73:0,27,363
chr10	107672966	.	G	GCA	13466.60	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-15.814;DP=1261;FS=6.423;HRun=0;HaplotypeScore=180.9471;InbreedingCoeff=0.9517;MQ=60.91;MQ0=2;MQRankSum=0.896;QD=38.15;ReadPosRankSum=-1.110;VQSLOD=5.2974;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:69,0:69:99:0,170,2069	1/1:2,10:11:21.07:354,21,0	0/0:45,0:34:41.05:0,41,703	0/0:56,1:44:53.70:0,54,880	0/0:25,0:25:54.17:0,54,694	0/0:30,0:30:78.25:0,78,1004	0/0:42,0:42:99:0,114,1438	1/1:8,39:48:99:1984,120,0	0/0:45,0:45:99:0,123,1583	0/0:53,0:53:99:0,132,1685	0/0:20,0:20:48.16:0,48,618	1/1:6,42:49:99:1771,105,0	0/0:40,0:40:99:0,102,1310	0/0:56,0:56:99:0,147,1874	0/0:57,0:57:99:0,162,2052	0/0:45,0:45:99:0,123,1541	0/0:39,0:39:84.15:0,84,1170	0/0:29,0:29:40.50:0,40,749	1/1:10,13:24:42.13:673,42,0	1/1:2,30:33:84.29:1415,84,0	1/1:40,124:162:99:6700,364,0	0/0:44,0:44:99:0,120,1544	0/0:29,0:29:69.22:0,69,881	0/0:58,0:58:99:0,138,1859	0/0:39,0:39:99:0,102,1313	0/0:51,0:50:99:0,147,1864	1/1:5,17:21:0.23:568,0,0	0/0:34,0:34:81.26:0,81,1042
chr10	107672967	.	C	CAT	6255.44	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=14.803;DP=1260;FS=6.853;HRun=0;HaplotypeScore=204.6570;InbreedingCoeff=0.5207;MQ=60.91;MQ0=2;MQRankSum=2.853;QD=17.57;ReadPosRankSum=2.555;VQSLOD=4.2022;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:69,2:71:99:0,194,2707	0/1:13,0:12:12.95:158,0,13	0/0:45,0:34:82.78:0,83,1041	0/0:58,0:43:63.54:0,64,1188	0/0:25,0:25:63.15:0,63,895	0/0:28,0:28:84.25:0,84,1239	0/0:42,0:42:99:0,117,1765	0/1:48,0:48:55.26:826,0,55	0/0:45,0:45:99:0,135,1975	0/0:53,0:53:99:0,156,2228	0/0:20,0:20:47.90:0,48,734	1/1:49,0:49:42.15:860,42,0	0/0:41,0:41:99:0,102,1559	0/0:57,0:57:99:0,159,2341	0/0:57,0:57:99:0,172,2542	0/0:46,0:46:99:0,129,1924	0/0:37,1:38:93.13:0,93,1474	0/0:27,1:28:36.49:0,36,986	0/1:25,0:25:99:271,0,100	1/1:33,0:33:42.14:719,42,0	1/1:163,3:163:99:3141,118,0	0/0:43,0:43:99:0,123,1844	0/0:27,0:27:78.21:0,78,1125	0/0:56,1:57:99:0,150,2320	0/0:39,0:39:99:0,117,1684	0/0:50,0:49:99:0,151,2274	0/1:22,0:21:86.50:282,0,87	0/0:34,0:34:93.24:0,93,1331
chr10	107673250	.	TCA	T	9786.60	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=19.482;DP=1269;FS=10.739;HRun=0;HaplotypeScore=202.3281;InbreedingCoeff=0.9882;MQ=62.63;MQ0=6;MQRankSum=5.124;QD=30.30;ReadPosRankSum=1.609;VQSLOD=5.6088;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:56:99:0,157,2619	1/1:4,16:20:38.92:489,39,0	0/0:53,0:38:77.66:0,78,1180	0/0:68,0:49:99:0,99,1642	0/0:36,0:36:99:0,99,1674	0/0:19,0:19:48.16:0,48,813	0/0:57,0:57:99:0,137,2304	1/1:8,35:43:99:1338,105,0	0/0:67,0:67:99:0,175,2907	0/0:77,0:77:99:0,205,3418	0/0:23,0:23:57.18:0,57,939	1/1:6,60:65:99:1868,144,0	0/0:48,0:48:99:0,135,2219	0/0:61,0:61:99:0,141,2350	0/0:62,0:62:99:0,181,3030	0/0:49,0:49:99:0,120,2037	0/0:25,0:25:63.22:0,63,1063	0/0:28,0:28:81.17:0,81,1302	1/1:9,22:28:60.18:766,60,0	1/1:1,30:31:78.25:1011,78,0	1/1:19,81:99:99:3457,273,0	0/0:38,0:38:99:0,111,1883	0/0:29,0:29:81.28:0,81,1367	0/0:62,0:62:99:0,172,2885	0/0:25,0:24:66.23:0,66,1110	0/0:49,0:49:99:0,129,2141	1/1:4,28:32:66.09:858,66,0	0/0:13,0:13:8.46:0,8,533
chr10	107673492	.	A	ACT	7282.48	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.877;DP=954;FS=0.645;HRun=0;HaplotypeScore=159.0910;InbreedingCoeff=1.0000;MQ=65.04;MQ0=1;MQRankSum=-10.208;QD=30.99;ReadPosRankSum=-5.200;VQSLOD=4.5451;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,147,1926	1/1:24,5:29:66.11:896,66,0	0/0:32,0:24:56.72:0,57,685	0/0:42,0:37:77.36:0,77,885	0/0:38,0:38:99:0,99,1278	0/0:25,0:25:69.11:0,69,846	0/0:19,0:19:51.15:0,51,672	1/1:13,18:30:77.01:1147,77,0	0/0:46,0:46:99:0,117,1564	0/0:48,0:48:99:0,135,1796	0/0:26,0:26:75.20:0,75,987	1/1:4,30:34:60.20:1019,60,0	0/0:34,0:34:90.28:0,90,1192	0/0:33,1:34:49.72:0,50,1216	0/0:52,0:52:99:0,153,1915	0/0:41,0:41:99:0,108,1377	0/0:23,0:23:69.11:0,69,856	0/0:20,0:20:57.14:0,57,734	1/1:10,18:29:72.13:1065,72,0	1/1:37,5:42:90.17:1306,90,0	1/1:34,11:45:51.56:912,52,0	0/0:28,0:28:78.24:0,78,1037	0/0:29,0:29:81.25:0,81,1076	0/0:33,0:32:84.28:0,84,1134	0/0:29,0:29:72:0,72,908	0/0:38,0:38:99:0,106,1356	1/1:19,6:25:66.08:939,66,0	0/0:29,0:29:69.47:0,69,918
chr10	107673498	.	T	TC	2114.88	PASS	AB=0.760;AC=12;AF=0.214;AN=56;BaseQRankSum=16.444;DP=935;FS=0.681;HRun=1;HaplotypeScore=155.9126;InbreedingCoeff=0.7479;MQ=62.93;MQ0=4;MQRankSum=-8.251;QD=9.40;ReadPosRankSum=-2.255;VQSLOD=0.4923;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,153,2090	1/1:12,12:24:34.54:419,35,0	0/0:32,0:21:60.56:0,61,710	0/0:39,0:33:80.09:0,80,930	0/0:35,0:35:99:0,102,1358	0/0:25,0:25:75.13:0,75,955	0/0:18,0:18:54.18:0,54,753	1/1:24,4:26:3.65:228,4,0	0/0:42,0:42:99:0,126,1753	0/0:50,0:49:99:0,147,2046	0/0:27,0:27:81.18:0,81,1086	1/1:31,0:31:32.17:221,32,0	0/0:33,0:33:96.32:0,96,1328	0/0:35,0:35:95.48:0,95,1397	0/0:57,0:57:99:0,169,2264	0/0:38,0:38:99:0,111,1528	0/0:24,0:24:72.17:0,72,963	0/0:21,0:21:63.21:0,63,874	0/1:26,7:32:99:193,0,101	0/1:23,18:41:76.93:544,0,77	1/1:33,8:41:15.62:363,16,0	0/0:28,0:28:78.26:0,78,1091	0/0:30,0:30:87.29:0,87,1205	0/0:30,0:29:90.26:0,90,1233	0/0:28,0:28:77.72:0,78,1008	0/0:38,0:38:99:0,114,1541	1/1:16,11:27:45.90:320,46,0	0/0:27,0:27:76.93:0,77,1028
chr10	107673499	.	T	TTTCTC	5665.75	PASS	AB=0.837;AC=11;AF=0.196;AN=56;BaseQRankSum=17.273;DP=944;FS=7.375;HRun=0;HaplotypeScore=216.9205;InbreedingCoeff=0.9215;MQ=62.72;MQ0=4;MQRankSum=-12.062;QD=28.19;ReadPosRankSum=-6.473;VQSLOD=1.9100;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,150,3104	1/1:9,11:24:48.04:1106,48,0	0/0:32,0:21:57.16:0,57,991	0/0:40,0:33:77.92:0,78,1179	0/0:34,0:34:96.29:0,96,1880	0/0:25,0:25:50.21:0,50,1239	0/0:19,0:19:54.17:0,54,1069	1/1:25,4:28:54.22:771,54,0	0/0:42,0:42:99:0,126,2628	0/0:50,0:49:99:0,147,2965	0/0:27,0:27:78.23:0,78,1499	0/0:29,0:29:11.06:0,11,341	0/0:34,0:34:99:0,99,1930	0/0:34,0:34:99:0,102,2012	0/0:56,0:56:99:0,163,3260	0/0:38,0:38:99:0,111,2199	0/0:25,0:25:66.22:0,66,1347	0/0:21,0:21:63.16:0,63,1140	0/1:29,6:35:2.53:934,0,3	1/1:21,18:41:99:1488,102,0	1/1:34,7:42:35.94:314,36,0	0/0:28,0:28:78.26:0,78,1629	0/0:30,0:30:87.29:0,87,1725	0/0:30,0:29:90.28:0,90,1837	0/0:28,0:30:74.83:0,75,1482	0/0:39,0:39:99:0,111,2275	1/1:7,11:28:51.10:1054,51,0	0/0:27,0:27:73.84:0,74,1485
chr10	107673744	.	CA	C	3217.62	PASS	AB=0.929;AC=15;AF=0.268;AN=56;BaseQRankSum=11.152;DP=660;FS=3.655;HRun=10;HaplotypeScore=69.1705;InbreedingCoeff=0.9041;MQ=72.17;MQ0=0;MQRankSum=0.800;QD=18.39;ReadPosRankSum=1.784;VQSLOD=4.5653;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,114,1244	1/1:1,10:11:26.99:234,27,0	0/0:16,0:16:31.86:0,32,279	0/1:12,1:12:24.57:25,0,131	0/0:30,0:30:69.17:0,69,753	0/0:21,0:21:54.13:0,54,582	0/0:34,0:34:93.25:0,93,1028	1/1:8,23:31:68.88:581,69,0	0/0:36,0:36:90.23:0,90,987	0/0:29,0:30:78.17:0,78,845	0/0:15,0:15:42.11:0,42,464	1/1:5,20:25:56.98:495,57,0	0/0:22,0:22:54.10:0,54,578	0/0:22,0:22:57.15:0,57,623	0/0:17,2:19:18.96:0,19,410	0/0:28,0:28:81.17:0,81,864	0/0:24,2:26:26.07:0,26,733	0/0:12,0:12:30.08:0,30,328	1/1:7,10:17:29.96:260,30,0	1/1:3,26:29:74.97:651,75,0	1/1:2,24:26:68.97:599,69,0	0/0:21,0:21:31.70:0,32,534	0/0:23,2:25:14.02:0,14,581	0/0:21,0:21:60.15:0,60,656	0/0:14,0:14:33.08:0,33,359	0/0:27,0:27:72.18:0,72,783	1/1:1,22:23:65.99:573,66,0	0/0:22,0:22:51.08:0,51,528
chr10	107674141	.	T	TCCGGCTAAGA	20548.77	PASS	AB=0.614;AC=13;AF=0.232;AN=56;BaseQRankSum=5.633;DP=744;FS=12.899;HRun=0;HaplotypeScore=221.6878;InbreedingCoeff=0.9214;MQ=65.24;MQ0=0;MQRankSum=-17.628;QD=116.75;ReadPosRankSum=-4.109;VQSLOD=3.0352;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,4278	1/1:1,7:8:24.08:1283,24,0	0/0:18,0:17:51.15:0,51,1326	0/0:21,0:20:58.05:0,58,1739	0/0:28,0:28:81.28:0,81,2708	0/0:26,0:26:75.21:0,75,2411	0/0:33,0:33:93.32:0,93,3049	1/1:23,5:29:87.26:3837,87,0	0/0:34,0:34:99:0,102,3287	0/0:34,0:34:96.31:0,96,3044	0/0:13,0:13:36.12:0,36,1089	0/1:13,20:35:5.54:4482,0,6	0/0:29,0:29:81.26:0,81,2528	0/0:35,0:35:99:0,105,3551	0/0:22,0:21:63.20:0,63,1913	0/0:30,0:30:87.28:0,87,2696	0/0:29,0:29:87.26:0,87,2704	0/0:30,0:30:90.31:0,90,2922	1/1:15,6:23:56.70:2860,57,0	1/1:12,12:25:63.22:2611,63,0	1/1:22,6:31:54.19:2371,54,0	0/0:29,0:29:87.30:0,87,2852	0/0:21,0:21:63.22:0,63,2079	0/0:30,0:30:90.31:0,90,2975	0/0:20,0:20:54.19:0,54,1791	0/0:34,0:34:99:0,102,3413	1/1:11,12:24:66.23:3105,66,0	0/0:7,0:7:21.07:0,21,635
chr10	107678120	.	C	CAA	825.04	PASS	AB=0.918;AC=11;AF=0.196;AN=56;BaseQRankSum=-0.540;DP=311;FS=9.824;HRun=13;HaplotypeScore=43.3840;InbreedingCoeff=0.4970;MQ=58.64;MQ0=13;MQRankSum=-2.107;QD=9.94;ReadPosRankSum=-4.668;VQSLOD=-0.3793;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:36:29.54:0,30,427	0/0:4,0:4:4.26:0,4,14	0/0:12,0:6:2.79:0,3,24	0/0:16,0:4:2.83:0,3,26	0/1:9,0:11:10.54:11,0,88	0/0:19,0:19:32.87:0,33,290	0/0:3,0:3:5.99:0,6,53	1/1:12,17:29:58.86:621,59,0	0/0:4,0:4:12:0,12,106	0/0:12,0:12:14.82:0,15,131	0/0:13,0:14:32.72:0,33,276	0/0:0,0:3:8.09:0,8,33	0/0:3,0:3:5.98:0,6,53	0/0:8,0:6:11.93:0,12,106	0/0:5,0:5:5.97:0,6,53	0/0:1,0:3:8.49:0,8,50	0/0:18,0:20:26.09:0,26,254	0/0:13,0:12:26.60:0,27,209	1/1:10,0:7:5.50:41,6,0	1/1:4,5:13:23.43:220,23,0	1/1:5,0:5:4.25:29,4,0	0/1:1,0:1:0:0,0,0	0/0:6,0:6:5.90:0,6,94	0/0:7,0:7:21:0,21,185	0/0:14,0:14:13.15:0,13,124	0/0:12,0:11:17.89:0,18,158	0/1:9,1:9:10.93:53,0,11	0/0:11,0:12:11.65:0,12,91
chr10	107678130	.	A	AT	33.43	PASS	AB=0.556;AC=3;AF=0.054;AN=56;BaseQRankSum=0.508;DP=316;FS=0.000;HRun=0;HaplotypeScore=34.4213;InbreedingCoeff=0.5687;MQ=57.81;MQ0=8;MQRankSum=0.447;QD=3.71;ReadPosRankSum=0.904;VQSLOD=2.7194;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.59:0,91,1022	0/1:1,4:5:1.95:67,0,2	0/0:8,0:4:5.98:0,6,55	0/0:10,0:4:11.92:0,12,116	0/0:13,0:13:33.09:0,33,343	0/0:20,0:20:50.86:0,51,600	0/0:3,0:3:9:0,9,104	0/0:32,0:31:63.51:0,64,433	0/0:6,0:6:18.04:0,18,220	0/0:11,0:11:30.07:0,30,350	0/0:16,0:16:45.07:0,45,541	1/1:4,0:4:11.39:65,11,0	0/0:3,0:3:9.02:0,9,109	0/0:7,0:5:14.96:0,15,178	0/0:7,0:7:18.03:0,18,190	0/0:3,0:3:8.94:0,9,82	0/0:21,0:21:59.65:0,60,660	0/0:15,0:13:36.02:0,36,419	0/0:15,0:13:30.46:0,30,262	0/0:13,0:13:26.26:0,26,191	0/0:6,0:6:14.92:0,15,116	0/0:1,0:1:3:0,3,27	0/0:11,0:10:23.67:0,24,269	0/0:8,0:8:24.04:0,24,311	0/0:15,0:15:36.85:0,37,377	0/0:13,0:12:36.08:0,36,414	0/0:9,0:9:16.41:0,16,131	0/0:9,0:9:20.99:0,21,221
chr10	107678330	.	C	CA	1885.02	PASS	AB=0.804;AC=10;AF=0.179;AN=56;BaseQRankSum=6.000;DP=451;FS=5.399;HRun=11;HaplotypeScore=58.7798;InbreedingCoeff=0.7429;MQ=75.22;MQ0=0;MQRankSum=0.212;QD=16.25;ReadPosRankSum=-3.016;VQSLOD=3.4486;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:47.71:0,48,363	0/0:0,0:5:10.19:0,10,29	0/0:14,0:14:12.34:0,12,127	0/1:13,0:13:29.44:29,0,33	0/0:18,0:18:47.78:0,48,370	0/0:29,0:29:68.69:0,69,530	0/0:20,1:21:17.32:0,17,310	1/1:6,21:27:60.58:603,61,0	0/0:13,0:13:35.85:0,36,276	0/0:14,0:14:38.84:0,39,301	0/0:17,0:17:41.82:0,42,325	0/0:0,0:10:14.26:0,14,41	0/0:19,0:19:53.76:0,54,415	0/0:10,0:11:19.89:0,20,145	0/0:25,0:27:72.30:0,72,532	0/0:8,0:8:17.89:0,18,139	0/0:20,0:20:50.78:0,51,395	0/0:14,0:14:32.81:0,33,252	1/1:8,14:23:24.69:417,25,0	1/1:2,8:10:21.04:213,21,0	0/1:6,11:17:10.40:269,0,10	0/0:10,0:10:26.90:0,27,209	0/0:13,0:13:29.86:0,30,232	0/0:15,0:15:38.83:0,39,299	0/0:8,0:8:23.86:0,24,181	0/0:18,0:18:34.96:0,35,356	1/1:2,23:26:53.89:522,54,0	0/0:8,0:9:22.94:0,23,168
chr10	107678702	.	G	GA	237.55	PASS	AB=0.917;AC=3;AF=0.054;AN=56;BaseQRankSum=1.994;DP=583;FS=7.150;HRun=9;HaplotypeScore=63.3308;InbreedingCoeff=0.5442;MQ=69.08;MQ0=0;MQRankSum=-1.738;QD=11.31;ReadPosRankSum=-1.208;VQSLOD=2.2388;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,886	0/0:5,0:5:12:0,12,104	0/0:8,0:8:0.04:0,0,66	0/0:10,0:10:22.53:0,23,183	0/0:35,0:35:98.98:0,99,858	0/0:24,0:25:71.02:0,71,605	0/0:21,0:21:59.83:0,60,501	0/0:32,0:32:68.80:0,69,597	0/0:16,0:16:44.99:0,45,391	0/0:28,0:28:71.98:0,72,625	0/0:37,0:37:99:0,104,909	1/1:1,9:10:30.08:330,30,0	0/0:17,0:17:47.95:0,48,409	0/1:10,1:11:6.20:6,0,181	0/0:21,0:21:59.99:0,60,521	0/0:15,0:15:41.97:0,42,361	0/0:29,0:29:55.32:0,55,628	0/0:16,0:16:38.99:0,39,339	0/0:23,0:23:65.95:0,66,565	0/0:26,0:26:65.99:0,66,573	0/0:16,0:16:38.98:0,39,338	0/0:26,0:26:68.97:0,69,599	0/0:20,0:20:56.99:0,57,495	0/0:18,0:18:50.99:0,51,442	0/0:19,0:19:56.99:0,57,494	0/0:15,0:15:44.99:0,45,391	0/0:26,0:26:8.63:0,9,343	0/0:19,0:19:56.99:0,57,495
chr10	107678737	.	A	AT	4121.52	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-0.052;DP=614;FS=0.383;HRun=6;HaplotypeScore=66.4934;InbreedingCoeff=0.9681;MQ=62.36;MQ0=1;MQRankSum=-0.510;QD=27.29;ReadPosRankSum=-1.335;VQSLOD=3.6272;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1092	1/1:1,0:10:11.07:58,11,0	0/0:14,0:8:5.28:0,5,160	0/0:9,0:6:15:0,15,143	0/0:36,0:36:96.20:0,96,971	0/0:22,0:22:57.12:0,57,581	0/0:25,0:25:66.10:0,66,658	1/1:5,21:26:57.16:699,57,0	0/0:17,0:17:48.11:0,48,490	0/0:24,0:24:66.13:0,66,664	0/0:29,0:29:78.15:0,78,782	1/1:3,10:13:30.10:374,30,0	0/0:15,0:15:36.08:0,36,367	0/0:13,0:13:39.09:0,39,397	0/0:26,0:26:69.15:0,69,703	0/0:16,0:16:45.10:0,45,459	0/0:25,0:25:63.04:0,63,627	0/0:19,0:19:23.61:0,24,450	1/1:2,29:31:87.28:1089,87,0	1/1:3,26:29:66.17:808,66,0	1/1:3,20:23:54.17:679,54,0	0/0:23,0:23:57.13:0,57,581	0/0:23,0:23:69.15:0,69,701	0/0:27,0:26:75.17:0,75,765	0/0:17,0:17:48.09:0,48,482	0/0:26,0:26:75.16:0,75,764	1/1:3,16:19:33.07:415,33,0	0/0:19,0:19:48.11:0,48,490
chr10	107679443	.	C	CT	3114.31	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.159;DP=562;FS=3.810;HRun=6;HaplotypeScore=74.4663;InbreedingCoeff=0.9729;MQ=75.24;MQ0=0;MQRankSum=-6.428;QD=27.81;ReadPosRankSum=-3.555;VQSLOD=2.6509;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.14:0,84,836	0/0:5,0:5:9.02:0,9,92	0/0:29,0:27:54.31:0,54,539	0/0:25,0:22:43.49:0,43,378	0/0:28,0:28:78.07:0,78,780	0/0:20,0:20:48.10:0,48,489	0/0:12,0:12:33.03:0,33,322	1/1:8,17:25:57.15:700,57,0	0/0:16,0:16:39.09:0,39,398	0/0:19,0:19:51.10:0,51,511	0/0:17,0:17:39.08:0,39,398	0/0:16,0:16:48.11:0,48,490	0/0:11,0:11:33.05:0,33,322	0/0:12,0:12:36.08:0,36,367	0/0:22,0:22:63.12:0,63,634	0/0:26,0:26:75.14:0,75,756	0/0:27,0:27:75.15:0,75,758	0/0:16,0:16:45.07:0,45,448	1/1:7,19:24:57.17:703,57,0	1/1:4,18:22:63.13:738,63,0	1/1:3,4:7:9.46:96,9,0	0/0:23,0:23:60.09:0,60,591	0/0:22,0:22:60.11:0,60,600	0/0:25,0:25:72.14:0,72,727	0/0:19,0:19:54.09:0,54,536	0/0:23,0:23:63.14:0,63,643	1/1:9,23:31:84.27:1049,84,0	0/0:8,0:8:21.05:0,21,214
chr10	107679465	.	C	CT	4925.56	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=8.731;DP=523;FS=2.888;HRun=0;HaplotypeScore=66.6307;InbreedingCoeff=0.9957;MQ=73.86;MQ0=1;MQRankSum=-10.694;QD=42.10;ReadPosRankSum=-1.911;VQSLOD=4.7344;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1320	./.	0/0:19,0:16:35.46:0,35,545	0/0:19,0:17:44.76:0,45,518	0/0:30,0:30:87.26:0,87,1173	0/0:19,0:19:57.15:0,57,744	0/0:11,0:11:33.10:0,33,444	1/1:2,23:25:75.23:1145,75,0	0/0:15,0:15:45.14:0,45,613	0/0:26,0:26:78.26:0,78,1090	0/0:12,0:12:36.12:0,36,503	1/1:0,21:21:60.20:958,60,0	0/0:11,0:11:33.10:0,33,444	0/0:13,0:13:39.13:0,39,545	0/0:23,0:23:69.22:0,69,947	0/0:21,0:21:63.19:0,63,847	0/0:25,0:25:72.24:0,72,1004	0/0:16,0:16:42.14:0,42,587	1/1:2,18:17:48.16:758,48,0	1/1:0,20:20:54.18:840,54,0	1/1:1,6:7:14.98:208,15,0	0/0:19,0:19:51.17:0,51,712	0/0:20,0:20:54.18:0,54,754	0/0:22,0:22:66.18:0,66,900	0/0:21,0:21:60.17:0,60,816	0/0:23,0:23:66.22:0,66,913	1/1:2,22:23:66.21:1016,66,0	0/0:7,0:7:21.07:0,21,292
chr10	107679935	.	G	GT	288.98	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=2.581;DP=483;FS=4.327;HRun=10;HaplotypeScore=52.9487;InbreedingCoeff=0.7985;MQ=72.59;MQ0=1;MQRankSum=-3.677;QD=8.03;ReadPosRankSum=-1.253;VQSLOD=1.3547;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:59.85:0,60,484	1/1:1,9:8:21.05:222,21,0	0/0:18,0:14:9.03:0,9,91	0/0:18,0:18:1.75:0,2,63	0/0:17,0:17:47.91:0,48,390	0/0:20,0:21:55.97:0,56,449	0/0:20,0:20:44.88:0,45,364	1/1:6,0:6:5.99:51,6,0	0/0:19,0:21:55.02:0,55,430	0/0:33,0:32:80.87:0,81,662	0/0:31,0:30:56.92:0,57,468	0/0:2,0:2:5.94:0,6,41	0/0:14,0:14:41.95:0,42,345	0/0:15,0:15:38.90:0,39,314	0/0:18,0:18:47.93:0,48,394	0/0:14,0:16:40.02:0,40,307	0/0:27,0:27:68.90:0,69,566	0/0:27,0:28:73.87:0,74,586	1/1:9,0:9:2.60:26,3,0	1/1:4,0:4:5.92:39,6,0	1/1:2,0:2:2.92:17,3,0	0/0:13,0:13:32.91:0,33,264	0/0:31,0:31:89.83:0,90,728	0/0:17,0:17:44.93:0,45,367	0/0:21,0:21:56.89:0,57,462	0/0:25,0:25:65.58:0,66,541	1/1:5,0:5:14.75:92,15,0	0/0:13,0:14:37.98:0,38,301
chr10	107680511	.	CAT	C	1621.04	PASS	AB=0.900;AC=20;AF=0.400;AN=50;BaseQRankSum=11.337;DP=1823;DS;FS=5.912;HRun=0;HaplotypeScore=499.8341;InbreedingCoeff=-0.3478;MQ=28.32;MQ0=117;MQRankSum=-11.562;QD=1.22;ReadPosRankSum=-1.748;VQSLOD=0.0524;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:75,7:57:21.79:0,22,413	1/1:15,0:7:2.83:15,3,0	./.	./.	0/1:50,15:48:19.19:19,0,107	0/1:48,12:39:60.70:61,0,492	0/0:33,3:19:9:0,9,173	./.	0/1:108,16:83:67.21:67,0,1132	0/1:88,6:65:99:248,0,1257	0/0:50,3:36:30.06:0,30,442	0/1:80,3:65:45.19:91,0,45	0/1:86,11:73:99:185,0,600	0/1:93,10:79:72.23:72,0,606	0/0:110,17:102:0.83:0,1,1143	0/1:94,18:81:99:115,0,1117	0/1:78,8:62:99:116,0,555	0/1:60,6:56:99:109,0,478	0/0:26,3:12:2.83:0,3,43	0/1:21,1:13:0:0,0,0	0/1:83,7:48:0:0,0,0	0/1:74,9:53:16.05:16,0,572	0/1:58,5:40:20.66:21,0,348	0/0:86,19:73:25.74:0,26,479	0/0:27,7:24:17.78:0,18,313	0/1:85,14:62:99:366,0,964	1/1:35,1:19:3.08:89,3,0	0/1:26,3:21:99:170,0,301
chr10	107680519	.	CAT	C	190.91	PASS	AB=0.988;AC=12;AF=0.240;AN=50;BaseQRankSum=8.367;DP=1507;DS;FS=2.653;HRun=0;HaplotypeScore=420.6312;InbreedingCoeff=-0.0797;MQ=27.84;MQ0=95;MQRankSum=-7.980;QD=0.30;ReadPosRankSum=-0.642;VQSLOD=1.0086;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:43:27.21:0,27,298	0/0:12,0:4:1.55:0,2,4	./.	./.	0/0:51,3:42:6.04:0,6,79	0/1:52,0:34:7.18:7,0,376	0/0:30,0:15:8.99:0,9,136	./.	0/0:94,1:63:34.60:0,35,790	0/0:77,0:56:48.04:0,48,1164	0/0:46,1:31:14.65:0,15,257	0/1:71,1:55:58.31:58,0,87	0/1:76,2:56:59.73:60,0,420	0/1:72,1:56:74.23:74,0,444	0/0:97,2:78:56.02:0,56,938	0/0:97,1:67:42.38:0,42,1032	0/1:67,1:47:1.64:2,0,432	0/1:55,0:45:46.65:47,0,474	0/0:23,0:11:16.73:0,17,128	1/1:20,0:12:1.25:3,1,0	0/1:75,1:41:0:0,0,0	0/0:72,1:48:21.74:0,22,474	0/0:53,2:34:10.71:0,11,273	0/0:87,2:60:26.54:0,27,360	0/0:31,0:22:14.99:0,15,256	0/1:82,1:51:38.56:39,0,827	0/1:28,1:16:22.25:22,0,51	0/1:28,0:20:2.28:2,0,266
chr10	107680521	.	T	TAC	277.60	PASS	AB=0.969;AC=14;AF=0.280;AN=50;BaseQRankSum=8.171;DP=1396;DS;FS=27.615;HRun=0;HaplotypeScore=393.6358;InbreedingCoeff=-0.1885;MQ=27.94;MQ0=85;MQRankSum=-7.661;QD=0.44;ReadPosRankSum=-3.526;VQSLOD=0.4818;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,2:38:8.80:0,9,71	0/0:11,0:4:0.89:0,1,2	./.	./.	0/0:51,0:41:2.54:0,3,24	0/1:45,2:32:25.41:25,0,158	0/0:26,1:15:5.83:0,6,74	./.	0/0:91,0:61:35.36:0,35,412	0/0:69,0:52:35.89:0,36,536	0/1:41,3:28:30.41:30,0,138	0/1:62,6:50:52.52:72,0,53	0/1:64,2:45:42.18:42,0,236	0/1:67,1:54:45.92:46,0,243	0/0:91,2:74:31.36:0,31,473	0/0:88,3:63:6.34:0,6,571	0/1:56,0:43:44.45:44,0,202	0/1:47,1:40:4.85:5,0,301	0/1:21,0:10:15.65:30,0,16	0/1:19,1:12:0:0,0,0	0/0:63,1:35:0:0,0,0	0/0:70,0:45:23.03:0,23,273	0/1:51,1:33:21.04:21,0,127	0/0:78,2:59:10.61:0,11,156	0/0:31,0:22:12.03:0,12,142	0/1:73,2:45:33.88:34,0,459	1/1:28,0:16:0.37:55,0,0	0/1:27,0:19:1.99:2,0,72
chr10	107680616	.	T	TAC	51.50	PASS	AB=1.000;AC=9;AF=0.188;AN=48;BaseQRankSum=6.164;DP=914;FS=27.896;HRun=0;HaplotypeScore=278.0112;InbreedingCoeff=0.3698;MQ=31.59;MQ0=68;MQRankSum=-6.124;QD=0.31;ReadPosRankSum=1.887;VQSLOD=1.4686;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:20:14.70:0,15,191	0/0:3,0:3:2.61:0,3,11	./.	./.	0/0:37,1:33:23.14:0,23,295	0/1:27,0:27:7.05:7,0,197	0/0:36,0:27:29.83:0,30,395	./.	0/0:65,0:58:44.64:0,45,527	0/0:90,0:61:73.83:0,74,1504	0/0:34,0:26:14.41:0,14,136	1/1:8,0:7:0.39:1,0,0	0/0:44,0:38:46.83:0,47,545	0/0:37,1:32:17.87:0,18,254	0/0:55,0:50:56.73:0,57,669	0/0:51,1:52:24.43:0,24,742	0/1:35,0:32:17.95:18,0,229	0/1:18,0:17:46.13:46,0,150	0/0:25,0:9:11.11:0,11,61	1/1:36,0:25:12.26:87,12,0	1/1:39,1:24:3.03:11,3,0	0/0:37,0:24:35.99:0,36,444	0/0:29,0:22:21.33:0,21,279	0/0:32,0:29:11.38:0,11,129	0/0:17,0:15:5.73:0,6,68	0/0:63,0:48:77.85:0,78,1339	./.	0/0:12,0:9:17.42:0,17,197
chr10	107680620	.	C	CAT	57.26	PASS	AB=1.000;AC=6;AF=0.125;AN=48;BaseQRankSum=5.588;DP=970;FS=4.379;HRun=0;HaplotypeScore=283.0593;InbreedingCoeff=0.0521;MQ=31.90;MQ0=80;MQRankSum=-4.725;QD=0.44;ReadPosRankSum=2.002;VQSLOD=2.0822;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:23:17.30:0,17,228	0/0:3,0:3:2.24:0,2,11	./.	./.	0/0:41,0:36:32.14:0,32,437	0/1:27,0:27:9.62:10,0,248	0/0:35,1:27:32.77:0,33,462	./.	0/0:65,1:58:56.31:0,56,700	0/0:94,0:61:99:0,138,1950	0/0:38,0:28:20.21:0,20,265	1/1:8,0:7:0.39:1,0,0	0/0:45,0:39:58.07:0,58,726	0/0:42,0:36:18.82:0,19,315	0/0:59,0:54:57.82:0,58,852	0/0:52,0:52:32.35:0,32,925	0/1:37,0:34:27.60:28,0,399	0/1:17,0:17:93.73:94,0,203	0/0:30,0:9:11.99:0,12,121	0/1:39,0:26:18.98:29,0,19	0/0:39,1:25:2.11:0,2,7	0/0:42,1:29:45:0,45,620	0/0:31,0:23:24.33:0,24,346	0/0:33,0:30:11.72:0,12,171	0/0:19,0:17:11.73:0,12,141	0/0:71,0:52:99:0,106,1719	./.	0/0:12,0:9:23.96:0,24,290
chr10	107682901	.	T	TCACACA	2081.67	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=-0.055;DP=393;FS=39.692;HRun=0;HaplotypeScore=138.2778;InbreedingCoeff=0.8818;MQ=67.43;MQ0=0;MQRankSum=-6.533;QD=65.05;ReadPosRankSum=-1.670;VQSLOD=1.8898;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.18:0,66,1426	1/1:10,0:10:30.10:815,30,0	0/0:9,0:9:12.03:0,12,224	0/0:8,0:7:11.93:0,12,153	0/0:37,0:37:99:0,102,2127	0/0:20,0:20:51.18:0,51,1138	0/0:18,0:18:48.15:0,48,1031	1/1:4,5:9:15.05:428,15,0	0/0:11,0:11:30.09:0,30,628	0/0:23,0:23:60.20:0,60,1246	0/0:17,0:17:42.58:0,43,827	./.	0/0:17,0:16:42.10:0,42,891	0/0:22,0:22:57.15:0,57,1223	0/0:12,0:12:30.10:0,30,670	0/0:11,0:11:33.11:0,33,736	0/0:27,0:26:60.15:0,60,1248	0/0:23,0:23:60.18:0,60,1294	1/1:2,0:2:3.01:82,3,0	1/1:2,6:8:21.07:702,21,0	1/1:1,0:1:2.98:21,3,0	0/0:13,0:13:39.13:0,39,869	0/0:12,0:12:36.12:0,36,759	0/0:11,0:11:18.06:0,18,402	0/0:20,0:20:60.21:0,60,1339	0/0:18,0:18:54.18:0,54,1173	1/1:1,1:2:6.02:199,6,0	0/0:8,0:8:21.05:0,21,422
chr10	107682909	.	A	ACACACACC	2254.40	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=1.182;DP=384;FS=44.963;HRun=0;HaplotypeScore=165.0778;InbreedingCoeff=0.8817;MQ=63.42;MQ0=0;MQRankSum=-7.604;QD=72.72;ReadPosRankSum=-0.647;VQSLOD=1.9156;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:66.23:0,66,1879	1/1:2,8:10:30.10:1307,30,0	0/0:6,0:6:15.05:0,15,337	0/0:8,0:7:17.36:0,17,218	0/0:37,0:37:99:0,102,2756	0/0:17,0:17:51.18:0,51,1491	0/0:16,0:16:48.15:0,48,1342	1/1:7,0:7:21.07:489,21,0	0/0:11,0:11:30.09:0,30,813	0/0:23,0:23:63.17:0,63,1690	0/0:16,0:16:42.09:0,42,1079	./.	0/0:18,0:17:42.10:0,42,1160	0/0:20,0:20:57.15:0,57,1590	0/0:12,0:12:33.10:0,33,902	0/0:12,0:12:33.11:0,33,954	0/0:22,0:21:60.15:0,60,1620	0/0:21,0:21:60.21:0,60,1689	0/0:2,0:2:3:0,3,28	1/1:10,0:10:24.08:477,24,0	1/1:1,0:1:2.98:21,3,0	0/0:14,0:14:42.13:0,42,1146	0/0:13,0:13:36.12:0,36,966	0/0:8,0:8:18.06:0,18,526	0/0:21,0:21:60.21:0,60,1744	0/0:20,0:20:60.19:0,60,1580	1/1:3,0:3:6.02:120,6,0	0/0:9,0:9:21.05:0,21,528
chr10	107684072	.	T	TCATC	1491.46	PASS	AB=0.556;AC=11;AF=0.196;AN=56;BaseQRankSum=-6.096;DP=678;FS=4.386;HRun=0;HaplotypeScore=106.7498;InbreedingCoeff=0.8020;MQ=71.09;MQ0=4;MQRankSum=-0.750;QD=11.47;ReadPosRankSum=-3.743;VQSLOD=2.1897;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:42.11:0,42,589	1/1:1,4:7:6.02:142,6,0	0/0:29,0:19:11.91:0,12,89	0/0:30,0:21:5.97:0,6,46	0/0:19,0:19:30.06:0,30,419	0/0:18,0:18:24.03:0,24,300	0/0:33,0:33:57.10:0,57,736	1/1:34,0:33:26.94:239,27,0	0/0:38,0:38:69.15:0,69,954	0/0:24,0:23:39.12:0,39,573	0/0:16,0:17:24.06:0,24,328	0/0:10,0:26:26.25:0,26,231	0/0:28,0:28:54.10:0,54,726	0/0:25,0:25:57.09:0,57,769	0/0:23,0:23:45.09:0,45,596	0/0:26,0:26:54.17:0,54,805	0/0:31,0:31:63.16:0,63,907	0/0:29,0:29:54.08:0,54,740	1/1:11,6:17:18.03:261,18,0	1/1:3,9:11:17.99:266,18,0	1/1:16,23:40:21.07:488,21,0	0/0:23,0:23:39.06:0,39,498	0/0:14,0:14:11.14:0,11,360	0/0:35,0:35:63.05:0,63,740	0/0:18,0:18:38.70:0,39,524	0/0:21,0:21:48.12:0,48,651	0/1:4,13:20:50.95:267,0,51	0/0:10,0:10:6.02:0,6,94
chr10	107684567	.	T	TGA	8958.69	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-15.719;DP=664;FS=12.979;HRun=0;HaplotypeScore=75.4300;InbreedingCoeff=0.9999;MQ=88.64;MQ0=0;MQRankSum=-5.583;QD=54.30;ReadPosRankSum=0.570;VQSLOD=3.9215;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:65:99:0,193,2976	1/1:0,18:18:48.16:975,48,0	0/0:21,0:21:63.17:0,63,913	0/0:26,0:26:77.55:0,78,1134	0/0:24,0:24:69.22:0,69,1097	0/0:30,0:30:90.27:0,90,1399	0/0:20,0:20:60.20:0,60,975	1/1:2,28:31:86.30:1642,86,0	0/0:20,0:20:60.20:0,60,978	0/0:25,0:25:72.23:0,72,1122	0/0:23,0:23:69.20:0,69,1051	1/1:0,21:21:63.21:1249,63,0	0/0:18,0:18:54.18:0,54,873	0/0:21,0:21:63.19:0,63,979	0/0:16,0:16:48.16:0,48,783	0/0:18,0:18:51.17:0,51,832	0/0:25,0:25:72.08:0,72,1174	0/0:24,0:24:72.25:0,72,1163	1/1:0,17:17:51.16:950,51,0	1/1:1,17:18:45.15:914,45,0	1/1:2,45:48:99:2620,129,0	0/0:16,0:16:45.15:0,45,726	0/0:16,0:16:45.14:0,45,706	0/0:30,0:30:90.26:0,90,1393	0/0:23,0:23:66.23:0,66,1074	0/0:17,0:17:51.16:0,51,788	1/1:0,11:12:30.10:609,30,0	0/0:21,0:21:63.15:0,63,926
chr10	107684765	.	AGT	A	374.44	PASS	AB=0.906;AC=14;AF=0.250;AN=56;BaseQRankSum=6.201;DP=750;FS=3.890;HRun=0;HaplotypeScore=125.3058;InbreedingCoeff=-0.0606;MQ=64.41;MQ0=10;MQRankSum=-0.152;QD=1.15;ReadPosRankSum=0.994;VQSLOD=2.1866;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,4:37:6.07:6,0,494	1/1:4,0:8:2.39:14,2,0	0/0:31,0:22:8.95:0,9,87	0/0:36,0:29:6:0,6,65	0/0:18,0:18:27.05:0,27,368	0/1:22,2:27:26.05:26,0,420	0/1:32,3:34:53.20:53,0,513	0/0:35,0:33:30.69:0,31,242	0/0:27,1:28:2.59:0,3,439	0/0:35,0:34:42.14:0,42,637	0/1:15,0:15:0.31:0,0,390	1/1:13,0:30:21.98:125,22,0	0/1:24,7:31:51.58:52,0,674	0/0:18,1:19:2.60:0,3,463	0/1:29,3:32:41.42:41,0,656	0/0:27,0:27:45.13:0,45,644	0/0:26,1:27:14.63:0,15,632	0/1:14,0:14:12.38:12,0,252	0/0:32,0:31:4.20:0,4,63	0/0:12,0:12:6.47:0,6,52	0/0:36,0:38:8.96:0,9,69	0/0:25,0:25:48.15:0,48,684	0/0:17,0:18:30.10:0,30,443	0/1:28,3:31:43.37:43,0,633	0/0:22,1:23:5.59:0,6,479	0/1:30,7:36:99:112,0,597	0/0:17,0:19:13.26:0,13,91	0/1:22,5:26:38.64:39,0,786
chr10	107684848	.	GTGTC	G	6481.66	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.908;DP=1040;FS=13.108;HRun=0;HaplotypeScore=206.6703;InbreedingCoeff=0.9995;MQ=60.64;MQ0=5;MQRankSum=1.172;QD=32.90;ReadPosRankSum=-0.895;VQSLOD=3.5092;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,115,2911	0/0:14,0:14:29.83:0,30,672	0/0:51,0:36:69.46:0,69,1483	0/0:66,0:45:66.48:0,66,1818	0/0:29,0:29:75.24:0,75,1839	0/0:35,0:35:83.89:0,84,2041	0/0:38,0:38:99:0,105,2607	1/1:12,36:46:99:1459,99,0	0/0:34,0:34:99:0,99,2464	0/0:52,0:52:99:0,147,3589	0/0:25,0:25:66.20:0,66,1548	0/0:54,0:54:99:0,135,3314	0/0:35,0:35:90.29:0,90,2430	0/0:20,0:20:51.13:0,51,1122	0/0:25,0:25:66.03:0,66,1489	0/0:28,0:28:66.20:0,66,1651	0/0:45,0:45:81.57:0,82,2386	0/0:28,0:28:48.01:0,48,1581	1/1:5,20:24:57.11:875,57,0	1/1:3,30:33:65.49:1183,65,0	1/1:20,56:75:99:2481,142,0	0/0:36,0:36:87.18:0,87,2144	0/0:27,0:27:66.21:0,66,1622	0/0:57,0:57:99:0,153,3778	0/0:29,0:29:62.93:0,63,1557	0/0:46,0:46:99:0,132,3361	1/1:2,13:15:27.09:483,27,0	0/0:17,0:17:29.16:0,29,966
chr10	107685250	.	ATGTGTGTGTCTG	A	399.59	PASS	AB=0.663;AC=1;AF=0.018;AN=56;BaseQRankSum=4.263;DP=1154;FS=0.000;HRun=0;HaplotypeScore=361.7523;InbreedingCoeff=-0.0184;MQ=54.91;MQ0=14;MQRankSum=-3.388;QD=6.77;ReadPosRankSum=-1.401;VQSLOD=0.4008;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,156,7360	0/0:11,0:11:30.10:0,30,1536	0/0:44,0:20:52.73:0,53,1594	0/0:34,0:15:30.63:0,31,928	0/0:28,0:28:78.27:0,78,3717	0/0:37,0:37:87.24:0,87,4129	0/0:43,0:43:99:0,103,4194	0/0:58,0:57:99:0,147,5458	0/0:56,0:56:99:0,138,6614	0/0:60,0:60:99:0,163,7176	0/0:20,0:20:45.15:0,45,2264	0/1:29,30:59:86.65:474,0,87	0/0:40,0:40:99:0,114,5018	0/0:39,0:39:99:0,111,5288	0/0:64,0:64:99:0,163,7470	0/0:43,0:43:99:0,117,5294	0/0:33,0:33:90.31:0,90,3961	0/0:33,0:33:90.31:0,90,4086	0/0:28,0:26:72.24:0,72,2886	0/0:33,0:32:59.65:0,60,2860	0/0:118,0:114:99:0,277,12654	0/0:35,0:35:96.32:0,96,4630	0/0:29,0:29:81.28:0,81,3860	0/0:60,0:60:99:0,153,7424	0/0:24,0:24:66.23:0,66,3471	0/0:35,0:35:99:0,99,4494	0/0:20,0:20:51.18:0,51,2345	0/0:7,0:7:21.02:0,21,911
chr10	107685288	.	C	CTG	7502.38	PASS	AB=0.741;AC=11;AF=0.196;AN=56;BaseQRankSum=-10.312;DP=1165;FS=3.117;HRun=0;HaplotypeScore=162.5713;InbreedingCoeff=0.8834;MQ=55.43;MQ0=17;MQRankSum=4.969;QD=28.20;ReadPosRankSum=-2.568;VQSLOD=5.3728;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,129,1565	1/1:11,7:18:42.08:606,42,0	0/0:53,0:22:16.15:0,16,194	0/0:50,0:24:14.70:0,15,424	0/0:29,0:29:78.23:0,78,959	0/0:28,0:28:30:0,30,635	0/0:42,0:44:89.33:0,89,1022	1/1:23,40:64:70.86:1670,71,0	0/0:55,0:55:99:0,123,1462	0/0:50,0:49:99:0,132,1568	0/0:23,0:22:51.07:0,51,601	0/0:59,0:60:62.96:0,63,756	0/0:37,0:37:96.23:0,96,1142	0/0:41,0:41:96.28:0,96,1172	0/0:46,0:46:99:0,102,1248	0/0:42,0:43:99:0,123,1487	0/0:28,0:28:72.22:0,72,887	0/0:36,0:36:81.19:0,81,1002	0/1:13,7:17:13.49:323,0,13	1/1:10,17:26:38.85:640,39,0	1/1:43,78:120:99:3933,169,0	0/0:40,0:40:99:0,99,1170	0/0:30,0:31:84.06:0,84,982	0/0:61,0:61:99:0,141,1756	0/0:29,0:30:50.23:0,50,753	0/0:42,0:41:99:0,114,1377	1/1:7,4:11:21.07:331,21,0	0/0:8,0:8:18.06:0,18,224
chr10	107685358	.	T	TTG	8097.34	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-5.924;DP=1075;FS=1.367;HRun=0;HaplotypeScore=174.6900;InbreedingCoeff=0.9893;MQ=58.34;MQ0=13;MQRankSum=-0.483;QD=32.13;ReadPosRankSum=-4.451;VQSLOD=4.7501;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,138,1716	1/1:7,6:13:30.01:439,30,0	0/0:55,0:19:14.10:0,14,289	0/0:39,0:14:15:0,15,157	0/0:28,0:28:64.18:0,64,940	0/0:20,0:20:40.61:0,41,566	0/0:29,0:29:69.17:0,69,845	1/1:16,43:57:99:1833,114,0	0/0:49,0:49:99:0,110,1408	0/0:44,0:45:99:0,123,1440	0/0:30,0:29:75.21:0,75,934	0/0:41,0:41:49.60:0,50,701	0/0:42,0:42:99:0,114,1420	0/0:24,0:24:63.18:0,63,779	0/0:39,0:39:96.19:0,96,1154	0/0:44,0:44:94.30:0,94,1108	0/0:40,0:40:93.28:0,93,1160	0/0:39,0:40:53.16:0,53,1122	1/1:13,5:14:27.05:360,27,0	1/1:8,20:28:75.25:1203,75,0	1/1:62,52:112:99:3552,232,0	0/0:34,0:34:90.28:0,90,1131	0/0:33,0:33:90.29:0,90,1144	0/0:62,0:62:99:0,144,1734	0/0:24,0:24:57.18:0,57,725	0/0:45,0:45:93.29:0,93,1172	1/1:6,12:18:45.14:711,45,0	0/0:7,0:7:15.04:0,15,179
chr10	107685440	.	C	CTG	8147.87	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-8.417;DP=988;FS=1.845;HRun=0;HaplotypeScore=159.4504;InbreedingCoeff=0.9956;MQ=53.68;MQ0=17;MQRankSum=-0.086;QD=31.70;ReadPosRankSum=-1.193;VQSLOD=6.2407;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:93.60:0,94,1417	1/1:0,8:8:24.08:408,24,0	0/0:55,0:18:35.77:0,36,413	0/0:60,0:25:50.69:0,51,575	0/0:26,0:26:69.20:0,69,867	0/0:24,0:24:53.89:0,54,676	0/0:26,0:26:65.73:0,66,854	1/1:31,15:42:71.19:1380,71,0	0/0:50,0:50:99:0,144,1865	0/0:41,0:41:99:0,99,1264	0/0:25,0:25:69.22:0,69,897	1/1:12,23:35:59.93:1011,60,0	0/0:31,0:31:81.22:0,81,1005	0/0:18,0:18:42.61:0,43,547	0/0:34,0:33:66.31:0,66,1089	0/0:38,0:38:96.31:0,96,1247	0/0:38,0:38:93.24:0,93,1159	0/0:32,0:32:76.98:0,77,957	1/1:8,14:23:14.26:682,14,0	1/1:8,21:29:63.17:1013,63,0	1/1:50,51:99:99:3252,176,0	0/0:30,0:29:78.23:0,78,986	0/0:20,0:20:51.16:0,51,656	0/0:60,0:60:99:0,144,1785	0/0:25,0:25:60.18:0,60,763	0/0:37,0:37:99:0,99,1195	1/1:6,9:15:24.08:402,24,0	0/0:11,0:11:27.40:0,27,293
chr10	107685497	.	CGT	C	2720.06	PASS	AB=0.919;AC=15;AF=0.268;AN=56;BaseQRankSum=9.604;DP=763;FS=11.184;HRun=0;HaplotypeScore=116.7745;InbreedingCoeff=0.7555;MQ=56.24;MQ0=13;MQRankSum=0.286;QD=12.25;ReadPosRankSum=0.303;VQSLOD=3.0549;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,102,1611	0/0:1,0:7:14.03:0,14,112	0/0:45,0:17:26.44:0,26,303	0/0:52,0:29:43.45:0,43,698	0/0:19,0:19:45.14:0,45,702	0/0:15,0:16:48.15:0,48,752	0/0:24,0:24:54.18:0,54,865	1/1:17,9:26:41.96:485,42,0	0/0:28,0:28:66.21:0,66,1012	0/0:40,0:40:87.27:0,87,1334	0/1:17,1:18:6.63:7,0,401	1/1:7,16:23:39.10:472,39,0	0/0:20,0:20:54.18:0,54,876	0/0:18,0:18:36.12:0,36,574	0/0:29,0:28:60.20:0,60,965	0/0:29,1:30:26.56:0,27,911	0/0:27,0:27:66.21:0,66,1045	0/0:25,0:25:49.32:0,49,700	1/1:8,7:13:27.08:328,27,0	1/1:9,16:24:41.76:512,42,0	1/1:30,29:58:80.66:908,81,0	0/0:33,0:33:78.26:0,78,1232	0/1:12,1:13:9.59:10,0,339	0/0:33,0:33:75.24:0,75,1177	0/1:26,4:30:7.05:7,0,897	0/0:36,1:37:41.60:0,42,1151	1/1:3,6:9:15:183,15,0	0/0:9,0:9:27.07:0,27,408
chr10	107685580	.	C	CTGTT	2614.53	PASS	AB=0.755;AC=13;AF=0.232;AN=56;BaseQRankSum=6.353;DP=687;FS=2.439;HRun=0;HaplotypeScore=129.9670;InbreedingCoeff=0.8756;MQ=62.73;MQ0=4;MQRankSum=-5.937;QD=13.76;ReadPosRankSum=-4.801;VQSLOD=2.2201;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,114,1756	0/0:15,0:15:33.11:0,33,530	0/0:22,0:18:12.04:0,12,193	0/0:38,0:34:11.52:0,12,446	0/0:19,0:19:45.12:0,45,648	0/0:22,0:22:51.16:0,51,787	0/0:17,0:17:18.06:0,18,289	1/1:32,0:32:17.97:241,18,0	0/0:28,0:28:51.14:0,51,772	0/1:25,11:37:99:771,0,505	0/0:17,0:17:33.09:0,33,477	1/1:16,0:22:27.08:445,27,0	0/0:15,0:15:36.11:0,36,546	0/0:10,0:10:18.06:0,18,289	0/0:24,0:24:39.12:0,39,597	0/0:22,0:22:57.17:0,57,866	0/0:31,0:32:81.22:0,81,1223	0/0:30,0:30:61.57:0,62,993	1/1:28,0:28:15.91:199,16,0	1/1:18,0:18:21.06:316,21,0	1/1:23,0:24:18.03:231,18,0	0/0:17,0:17:24.07:0,24,362	0/0:32,0:32:69.23:0,69,1083	0/0:35,0:36:72.14:0,72,1104	0/0:18,0:18:21.04:0,21,291	0/0:24,0:24:42.14:0,42,647	1/1:23,0:24:39.07:601,39,0	0/0:7,0:7:18.06:0,18,289
chr10	107686812	.	A	AGAG	2930.78	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=1.532;DP=621;FS=0.983;HRun=0;HaplotypeScore=110.7089;InbreedingCoeff=0.9915;MQ=67.41;MQ0=4;MQRankSum=-5.520;QD=22.04;ReadPosRankSum=-3.839;VQSLOD=2.7820;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,131,1953	0/0:9,0:9:18.06:0,18,266	0/0:29,0:22:41.98:0,42,512	0/0:31,0:21:34.99:0,35,434	0/0:17,0:17:36:0,36,491	0/0:13,0:12:24.08:0,24,365	0/0:40,0:40:77.90:0,78,1291	1/1:13,4:17:28.71:391,29,0	0/0:19,0:19:45.15:0,45,681	0/0:16,0:16:39.12:0,39,552	0/0:17,0:17:36.05:0,36,498	1/1:11,4:15:33.49:536,33,0	0/0:12,0:12:30.08:0,30,407	0/0:22,0:22:54.16:0,54,777	0/0:25,0:25:60.17:0,60,848	0/0:19,0:19:51.14:0,51,714	0/0:24,0:24:57.17:0,57,839	0/0:16,0:16:45.12:0,45,634	1/1:11,20:30:63.95:922,64,0	1/1:7,5:12:14.36:226,14,0	1/1:14,22:36:23.63:516,24,0	0/0:21,0:21:45.13:0,45,626	0/0:17,0:17:42.01:0,42,574	0/0:29,0:29:81.27:0,81,1225	0/0:11,0:11:27.09:0,27,410	0/0:30,0:30:81.26:0,81,1190	1/1:16,5:19:48.58:527,49,0	0/0:7,0:7:18.05:0,18,252
chr10	107686822	.	G	GA	799.83	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=11.271;DP=652;FS=9.722;HRun=0;HaplotypeScore=95.6819;InbreedingCoeff=0.3887;MQ=60.47;MQ0=16;MQRankSum=-7.607;QD=5.92;ReadPosRankSum=-1.879;VQSLOD=2.2154;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,140,1975	0/0:9,0:9:21.07:0,21,293	0/0:39,0:18:48.15:0,48,640	0/0:34,0:18:47.17:0,47,596	0/0:16,0:16:45.06:0,45,601	0/0:19,0:16:39.09:0,39,481	0/0:39,0:39:80.55:0,81,1295	0/1:23,0:22:90.46:90,0,172	0/0:21,0:21:63.16:0,63,840	0/0:16,0:15:42.12:0,42,549	0/0:16,0:16:42.13:0,42,570	0/1:15,0:15:33.60:142,0,34	0/0:14,0:14:42.13:0,42,561	0/0:25,0:25:72.22:0,72,971	0/0:26,0:26:78.23:0,78,1040	0/0:24,0:23:66.19:0,66,866	0/0:23,0:23:63.65:0,64,860	0/0:19,0:19:40.96:0,41,590	0/1:24,0:21:76.29:205,0,76	0/1:13,0:13:23.43:47,0,23	1/1:34,3:36:41.41:198,41,0	0/0:23,0:22:54.16:0,54,722	0/0:16,0:15:42.12:0,42,554	0/0:32,0:31:90.30:0,90,1255	0/0:15,0:15:39.13:0,39,542	0/0:29,0:28:84.27:0,84,1140	1/1:19,2:20:8.18:261,8,0	0/0:9,0:9:21.06:0,21,277
chr10	107686851	.	G	GGAGGAA	1132.31	PASS	AB=0.939;AC=6;AF=0.107;AN=56;BaseQRankSum=9.841;DP=628;FS=35.373;HRun=0;HaplotypeScore=148.4499;InbreedingCoeff=-0.1207;MQ=55.08;MQ0=21;MQRankSum=-8.783;QD=7.92;ReadPosRankSum=-0.129;VQSLOD=0.8978;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,2112	0/0:8,0:8:24.02:0,24,364	0/0:22,0:7:16.72:0,17,219	0/0:31,0:19:23.67:0,24,423	0/0:18,0:17:51.14:0,51,984	0/0:17,0:15:42.04:0,42,737	0/0:34,0:33:93.14:0,93,1520	0/1:31,0:27:99:156,0,293	0/0:20,0:20:60.18:0,60,1287	0/0:25,0:24:66.19:0,66,1230	0/0:21,0:21:51.09:0,51,966	0/1:8,11:19:99:230,0,118	0/0:15,0:14:39.13:0,39,872	0/0:25,0:25:72.20:0,72,1441	0/0:29,0:29:84.23:0,84,1550	0/0:25,0:24:69.21:0,69,1426	0/0:24,0:24:66.13:0,66,1232	0/0:15,0:15:31.40:0,31,564	0/1:28,0:23:99:252,0,192	0/1:15,0:14:95.99:101,0,96	0/1:28,0:26:61.23:143,0,61	0/0:19,0:18:48.13:0,48,933	0/0:13,0:11:33.08:0,33,664	0/0:29,0:28:72.10:0,72,1306	0/0:19,0:19:48.14:0,48,995	0/0:21,0:21:60.14:0,60,1163	0/1:22,0:22:99:376,0,142	0/0:13,0:12:28.30:0,28,501
chr10	107686854	.	G	GGAA	1901.36	PASS	AB=0.824;AC=6;AF=0.107;AN=56;BaseQRankSum=10.794;DP=632;FS=23.636;HRun=0;HaplotypeScore=115.8392;InbreedingCoeff=-0.1177;MQ=57.51;MQ0=18;MQRankSum=-8.865;QD=13.39;ReadPosRankSum=-0.797;VQSLOD=1.3985;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1655	0/0:8,0:8:24.01:0,24,292	0/0:25,0:11:20.19:0,20,264	0/0:34,0:21:14.97:0,15,427	0/0:18,0:17:51.14:0,51,790	0/0:16,0:15:42.04:0,42,592	0/0:35,0:34:96.15:0,96,1305	0/1:27,4:28:99:231,0,343	0/0:20,0:20:60.17:0,60,961	0/0:25,0:24:66.19:0,66,1005	0/0:20,0:20:54.09:0,54,777	0/1:17,0:17:56.25:56,0,175	0/0:15,0:14:39.13:0,39,662	0/0:25,0:25:75.17:0,75,1159	0/0:29,0:29:87.22:0,87,1282	0/0:25,0:24:72.21:0,72,1123	0/0:25,0:26:69.11:0,69,979	0/0:15,0:15:6.79:0,7,401	0/1:24,3:23:99:292,0,243	0/1:7,8:14:94.44:322,0,94	0/1:24,4:27:16.59:405,0,17	0/0:19,0:19:51.12:0,51,741	0/0:14,0:12:36.08:0,36,532	0/0:29,0:28:78.14:0,78,1090	0/0:18,0:18:51.14:0,51,783	0/0:22,0:22:63.14:0,63,943	0/1:10,13:24:99:718,0,141	0/0:12,0:11:29.86:0,30,410
chr10	107687160	.	AAGAGGGAG	A	2116.47	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=11.214;DP=736;FS=13.188;HRun=0;HaplotypeScore=187.8973;InbreedingCoeff=0.8830;MQ=65.98;MQ0=7;MQRankSum=-6.001;QD=10.85;ReadPosRankSum=-3.271;VQSLOD=1.3639;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:88.54:0,89,3064	0/0:10,0:10:21.07:0,21,851	0/0:38,0:21:11.18:0,11,226	0/1:55,0:34:3.80:4,0,52	0/0:19,0:19:42.13:0,42,1560	0/0:27,0:26:57.15:0,57,1843	0/0:31,0:31:69.18:0,69,2139	1/1:25,10:35:28.28:359,28,0	0/0:28,0:28:42.12:0,42,1308	0/0:32,0:32:66.21:0,66,2166	0/0:19,0:19:45.13:0,45,1356	1/1:12,16:28:56.23:953,56,0	0/0:15,0:15:27.09:0,27,997	0/0:25,0:25:57.12:0,57,1872	0/0:18,0:18:39.13:0,39,1294	0/0:19,0:19:33.06:0,33,942	0/0:35,0:34:57.17:0,57,1897	0/0:31,0:31:57.20:0,57,1979	1/1:15,7:22:19.25:373,19,0	1/1:7,5:12:5.93:40,6,0	1/1:16,3:19:9.03:166,9,0	0/0:25,0:25:54.19:0,54,2040	0/0:17,0:17:45.15:0,45,1382	0/0:33,0:33:60.16:0,60,2103	0/0:23,0:23:39.12:0,39,1404	0/0:38,0:38:72.24:0,72,2528	1/1:12,11:23:18.02:401,18,0	0/0:13,0:13:27.09:0,27,922
chr10	107687542	.	AGG	A	2454.87	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=15.122;DP=724;FS=0.000;HRun=2;HaplotypeScore=119.4038;InbreedingCoeff=0.9999;MQ=86.76;MQ0=0;MQRankSum=-13.592;QD=25.05;ReadPosRankSum=-1.381;VQSLOD=1.8845;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,2197	0/0:13,0:13:39.13:0,39,788	0/0:27,0:27:78.24:0,78,1466	0/0:32,0:32:90.27:0,90,1695	0/0:26,0:26:75.26:0,75,1524	0/0:14,0:14:42.14:0,42,852	0/0:38,0:38:99:0,114,2242	1/1:0,17:17:51.08:508,51,0	0/0:30,0:30:90.31:0,90,1793	0/0:34,0:34:99:0,99,2011	0/0:12,0:12:36.12:0,36,730	0/0:28,0:28:81.28:0,81,1646	0/0:35,0:35:99:0,105,2124	0/0:21,0:21:63.22:0,63,1280	0/0:34,0:34:99:0,102,2062	0/0:34,0:34:99:0,102,2038	0/0:23,0:23:69.22:0,69,1365	0/0:35,0:35:99:0,105,2108	1/1:0,18:19:56.17:571,56,0	1/1:1,12:13:39.06:376,39,0	1/1:4,15:20:53.23:455,53,0	0/0:24,0:24:72.21:0,72,1389	0/0:11,0:11:33.11:0,33,669	0/0:45,0:45:99:0,135,2702	0/0:17,0:17:51.18:0,51,1027	0/0:31,0:31:93.32:0,93,1874	1/1:1,24:29:75.74:720,76,0	0/0:25,0:25:75.26:0,75,1519
chr10	107687545	.	ACTACCTG	A	5320.46	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.751;DP=712;FS=1.922;HRun=0;HaplotypeScore=181.6616;InbreedingCoeff=0.9999;MQ=88.13;MQ0=0;MQRankSum=-14.215;QD=59.12;ReadPosRankSum=-0.259;VQSLOD=4.8746;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,4201	0/0:14,0:14:42.14:0,42,1677	0/0:27,0:27:72.25:0,72,2837	0/0:33,0:33:87.77:0,88,3060	0/0:25,0:25:75.26:0,75,3065	0/0:14,0:14:42.14:0,42,1736	0/0:38,0:38:99:0,114,4567	1/1:2,14:16:44.95:931,45,0	0/0:28,0:28:84.26:0,84,3316	0/0:34,0:34:99:0,100,4050	0/0:12,0:12:36.12:0,36,1404	0/0:29,0:29:84.29:0,84,3444	0/0:36,0:36:99:0,108,4426	0/0:21,0:21:63.22:0,63,2617	0/0:34,0:34:99:0,102,4281	0/0:33,0:33:99:0,99,4111	0/0:24,0:24:72.25:0,72,2904	0/0:35,0:35:99:0,102,4159	1/1:0,18:18:54.19:1194,54,0	1/1:0,12:12:36.12:769,36,0	1/1:1,15:16:42.14:865,42,0	0/0:22,0:22:66.23:0,66,2692	0/0:11,0:11:33.11:0,33,1330	0/0:46,0:46:99:0,138,5587	0/0:16,0:16:48.16:0,48,2012	0/0:30,0:30:90.31:0,90,3726	1/1:4,24:28:75.26:1561,75,0	0/0:25,0:25:75.26:0,75,3111
chr10	107687998	.	GGACT	G	4551.71	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.957;DP=515;FS=0.931;HRun=0;HaplotypeScore=86.9478;InbreedingCoeff=0.9972;MQ=82.14;MQ0=0;MQRankSum=-5.697;QD=47.41;ReadPosRankSum=-1.788;VQSLOD=5.0145;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,2968	0/0:12,0:12:36.11:0,36,934	0/0:18,0:18:54.14:0,54,1258	0/0:12,0:12:27.09:0,27,695	0/0:10,0:10:30.10:0,30,793	0/0:14,0:14:42.14:0,42,1163	0/0:43,0:43:99:0,126,3378	1/1:3,18:21:57.18:1063,57,0	0/0:14,0:14:42.13:0,42,1115	0/0:19,0:19:57.18:0,57,1474	0/0:9,0:9:27.09:0,27,753	0/0:22,0:22:66.23:0,66,1832	0/0:18,0:18:48.16:0,48,1340	0/0:19,0:19:57.20:0,57,1584	0/0:14,0:14:42.14:0,42,1175	0/0:15,0:15:42.14:0,42,1174	0/0:15,0:15:45.15:0,45,1241	0/0:33,0:33:96.33:0,96,2608	1/1:2,15:17:45.09:787,45,0	1/1:0,7:7:18.02:314,18,0	1/1:0,33:33:68.84:1369,69,0	0/0:21,0:21:60.19:0,60,1599	0/0:9,0:9:27.09:0,27,733	0/0:20,0:20:60.21:0,60,1615	0/0:16,0:16:48.16:0,48,1322	0/0:15,0:15:45.15:0,45,1172	1/1:0,18:18:51.18:1018,51,0	0/0:13,0:13:39.13:0,39,1082
chr10	107688670	.	G	GAA	484.63	PASS	AB=0.873;AC=9;AF=0.161;AN=56;BaseQRankSum=7.954;DP=528;FS=11.667;HRun=0;HaplotypeScore=92.0761;InbreedingCoeff=0.5905;MQ=54.40;MQ0=19;MQRankSum=-6.798;QD=4.80;ReadPosRankSum=-0.817;VQSLOD=1.6460;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:38:66.03:0,66,1332	0/0:11,0:11:26.26:0,26,351	0/0:26,0:4:5.27:0,5,69	0/1:29,0:7:1.22:1,0,104	0/0:14,0:14:28.62:0,29,418	0/0:13,0:13:31.34:0,31,469	0/0:21,0:21:54.14:0,54,815	0/1:16,3:19:15.13:105,0,15	0/0:18,0:16:39.08:0,39,540	0/0:24,0:23:51.16:0,51,764	0/0:14,0:14:30.10:0,30,456	0/0:16,0:16:48.16:0,48,747	0/0:12,0:12:23.79:0,24,353	0/0:12,0:12:21.06:0,21,308	0/0:21,0:20:48.15:0,48,740	0/0:10,0:10:30.10:0,30,457	0/0:41,0:37:91.53:0,92,1379	0/0:32,0:32:87.05:0,87,1324	1/1:9,1:13:15.43:86,15,0	1/1:10,1:11:4.17:77,4,0	0/1:2,1:8:5.59:32,0,6	0/0:22,0:22:44.95:0,45,617	0/0:14,0:13:20.72:0,21,278	0/0:28,0:28:44.71:0,45,936	0/0:16,0:16:42.07:0,42,575	0/0:16,0:16:45.06:0,45,611	1/1:8,6:16:39.67:328,40,0	0/0:6,0:5:6.02:0,6,93
chr10	107689430	.	CAAAGGCTCGGGAGAGT	C	876.48	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.418;DP=728;FS=0.000;HRun=0;HaplotypeScore=316.5448;InbreedingCoeff=0.9959;MQ=86.01;MQ0=0;MQRankSum=-4.505;QD=97.39;ReadPosRankSum=1.461;VQSLOD=2.8355;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,7366	1/1:1,8:9:21.07:969,21,0	0/0:23,0:23:57.20:0,57,3218	0/0:24,0:24:57.18:0,57,3653	0/0:24,0:24:60.13:0,60,4235	0/0:25,0:25:66.23:0,66,4402	0/0:30,0:30:90.31:0,90,6313	0/0:27,0:27:69.24:0,69,4357	0/0:33,0:33:84.27:0,84,5737	0/0:27,0:27:69.24:0,69,4213	0/0:27,0:27:78.24:0,78,5330	0/0:22,0:22:60.21:0,60,4466	0/0:27,0:27:78.25:0,78,5297	0/0:23,0:23:63.22:0,63,4521	0/0:37,0:37:99:0,105,7771	0/0:18,0:18:54.17:0,54,3778	0/0:30,0:30:75.26:0,75,5751	0/0:21,0:21:63.22:0,63,4371	0/0:26,0:26:75.26:0,75,4247	0/0:15,0:15:39.13:0,39,2499	0/0:44,0:44:99:0,123,8142	0/0:30,0:30:87.28:0,87,5946	0/0:19,0:19:51.18:0,51,3512	0/0:28,0:28:78.27:0,78,5815	0/0:27,0:27:72.25:0,72,5319	0/0:31,0:31:87.28:0,87,5738	0/0:23,0:22:69.20:0,69,4189	0/0:19,0:19:57.20:0,57,4448
chr10	107689830	.	T	TGTGTGC	5234.78	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-8.899;DP=754;FS=20.439;HRun=0;HaplotypeScore=148.9171;InbreedingCoeff=0.9857;MQ=67.18;MQ0=2;MQRankSum=-6.305;QD=35.37;ReadPosRankSum=-3.525;VQSLOD=2.6436;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,117,2019	0/0:13,0:13:33.11:0,33,753	0/0:29,0:25:33.53:0,34,727	0/0:46,0:37:83.51:0,84,1538	0/0:35,0:33:96.28:0,96,1990	0/0:24,0:24:57.09:0,57,976	0/0:31,0:31:73.54:0,74,1535	1/1:10,31:44:93.14:2055,93,0	0/0:17,0:17:51.16:0,51,1075	0/0:28,0:28:84.18:0,84,1670	0/0:19,0:19:54.13:0,54,1017	0/0:30,0:30:83.97:0,84,1619	0/0:17,0:17:48.15:0,48,1028	0/0:31,0:31:90.28:0,90,1928	0/0:27,0:27:69.19:0,69,1424	0/0:19,0:19:57.18:0,57,1251	0/0:28,0:28:75.21:0,75,1497	0/0:25,0:25:72.16:0,72,1394	1/1:6,14:23:51.05:1034,51,0	1/1:3,18:21:24.08:829,24,0	1/1:6,25:36:9.03:275,9,0	0/0:14,0:14:42.14:0,42,938	0/0:32,0:32:93.29:0,93,1893	0/0:31,0:31:93.15:0,93,1760	0/0:15,0:15:42.13:0,42,896	0/0:30,0:29:84.25:0,84,1640	1/1:0,20:22:32:1042,32,0	0/0:18,0:18:51.10:0,51,1019
chr10	107690475	.	CA	C	1277.16	PASS	AB=0.925;AC=9;AF=0.161;AN=56;BaseQRankSum=16.485;DP=892;FS=32.231;HRun=1;HaplotypeScore=124.4538;InbreedingCoeff=0.7145;MQ=58.53;MQ0=1;MQRankSum=-0.450;QD=8.03;ReadPosRankSum=2.722;VQSLOD=-0.6388;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,136,2097	0/0:26,0:26:75.24:0,75,1103	0/0:38,0:37:99:0,108,1557	0/0:35,0:29:84.17:0,84,1131	0/0:27,0:27:72.17:0,72,1042	0/0:26,0:26:72.14:0,72,1028	0/0:33,0:33:99:0,99,1459	0/1:27,0:24:2.59:129,0,3	0/0:43,0:43:99:0,126,1886	0/0:38,0:38:99:0,114,1673	0/0:25,0:25:71.94:0,72,995	1/1:38,1:38:60.93:398,61,0	0/0:18,0:18:51.17:0,51,771	0/0:31,0:31:87.29:0,87,1321	0/0:34,0:34:93.27:0,93,1354	0/0:23,0:23:58.04:0,58,973	0/0:37,0:37:90.40:0,90,1531	0/0:41,0:41:83.10:0,83,1694	0/1:6,1:7:6.51:33,0,7	0/1:16,2:18:6.74:132,0,7	1/1:44,1:42:80.95:467,81,0	0/0:33,0:33:93.25:0,93,1367	0/0:31,0:31:87.06:0,87,1149	0/0:52,0:52:99:0,147,2187	0/0:25,0:25:72.22:0,72,1059	0/0:43,0:43:99:0,124,1750	1/1:23,0:23:23.99:276,24,0	0/0:23,0:23:69.23:0,69,1053
chr10	107690476	.	AC	A	4358.06	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.468;DP=893;FS=23.082;HRun=4;HaplotypeScore=116.1737;InbreedingCoeff=0.9963;MQ=58.60;MQ0=1;MQRankSum=-1.079;QD=27.76;ReadPosRankSum=1.393;VQSLOD=3.0703;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,141,1899	0/0:26,0:26:75.25:0,75,1049	0/0:37,0:36:90.97:0,91,1310	0/0:35,0:30:81.23:0,81,1044	0/0:27,0:27:72.11:0,72,933	0/0:26,0:26:69.21:0,69,945	0/0:33,0:33:96.28:0,96,1319	1/1:2,23:23:66.13:750,66,0	0/0:43,0:43:99:0,129,1781	0/0:38,0:38:99:0,108,1484	0/0:25,0:25:69.17:0,69,922	1/1:4,36:39:89.78:1077,90,0	0/0:19,0:19:57.17:0,57,765	0/0:31,0:31:90.29:0,90,1241	0/0:34,0:34:84.27:0,84,1159	0/0:23,0:23:37.41:0,37,833	0/0:36,1:37:72.43:0,72,1397	0/0:39,2:41:46.34:0,46,1559	1/1:2,5:7:15.02:167,15,0	1/1:2,16:18:24.07:282,24,0	1/1:2,43:42:99:1326,111,0	0/0:33,0:33:96.31:0,96,1325	0/0:32,0:32:83.87:0,84,1162	0/0:52,0:52:99:0,144,1989	0/0:26,0:26:69.23:0,69,965	0/0:43,0:43:99:0,114,1538	1/1:0,22:22:63.19:755,63,0	0/0:23,0:23:69.23:0,69,964
chr10	107690537	.	G	GTCCA	1496.69	PASS	AB=0.644;AC=1;AF=0.022;AN=46;BaseQRankSum=-5.905;DP=782;FS=0.000;HRun=0;HaplotypeScore=129.5355;InbreedingCoeff=-0.0203;MQ=53.99;MQ0=13;MQRankSum=-1.044;QD=39.39;ReadPosRankSum=2.040;VQSLOD=4.0546;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:53:99:0,117,1957	0/0:22,0:22:51.17:0,51,860	0/0:51,0:21:39.09:0,39,567	0/0:45,0:21:30.08:0,30,475	0/0:28,0:28:63.22:0,63,1075	0/0:19,0:19:30.10:0,30,512	0/0:36,0:36:78.27:0,78,1300	./.	0/0:38,0:38:99:0,102,1693	0/0:31,0:31:78.26:0,78,1306	0/0:22,0:22:45.15:0,45,766	0/1:17,21:36:30.14:1570,0,30	0/0:28,0:28:75.26:0,75,1269	0/0:44,0:44:99:0,99,1659	0/0:47,0:47:99:0,123,2021	0/0:30,0:29:72.25:0,72,1218	0/0:37,0:37:90.26:0,90,1472	0/0:32,1:32:72.21:0,72,1152	./.	./.	./.	0/0:26,0:26:63.22:0,63,1071	0/0:21,0:21:51.17:0,51,864	0/0:34,1:34:72.20:0,72,1189	0/0:23,0:23:48.13:0,48,762	0/0:42,0:42:99:0,102,1712	./.	0/0:16,0:16:36.12:0,36,614
chr10	107690566	.	TCCAG	T	62.15	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=3.038;DP=800;FS=4.864;HRun=0;HaplotypeScore=127.4686;InbreedingCoeff=0.7225;MQ=51.83;MQ0=58;MQRankSum=-1.618;QD=4.44;ReadPosRankSum=-1.988;VQSLOD=2.1201;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:51:99:0,132,3236	0/0:16,0:16:48.16:0,48,1283	0/0:63,0:15:41.98:0,42,712	0/0:50,0:13:36.54:0,37,703	0/0:26,0:26:62.84:0,63,1479	0/0:20,0:19:44.92:0,45,1011	0/0:38,0:38:99:0,99,2383	0/0:1,0:1:3.01:0,3,75	0/0:39,0:39:99:0,111,2742	0/0:39,0:39:99:0,108,2732	0/0:20,0:20:54.17:0,54,1369	0/0:45,0:44:99:0,118,2838	0/0:33,0:33:96.30:0,96,2383	0/0:42,0:42:99:0,114,2937	0/0:47,0:47:99:0,141,3545	0/0:31,0:31:90.24:0,90,2233	0/0:32,0:32:92.98:0,93,2146	0/0:27,0:25:72.14:0,72,1596	1/1:0,1:1:3.01:56,3,0	1/1:0,8:8:3.01:57,3,0	1/1:0,5:5:3.01:57,3,0	0/0:26,0:26:69.22:0,69,1643	0/0:22,0:22:54.17:0,54,1397	0/0:29,0:28:39.07:0,39,1300	0/0:23,0:23:69.14:0,69,1669	0/0:42,0:41:99:0,117,2948	./.	0/0:22,0:22:63.08:0,63,1394
chr10	107690734	.	TCCAG	T	506.68	PASS	AB=0.599;AC=7;AF=0.125;AN=56;BaseQRankSum=6.389;DP=793;FS=17.034;HRun=0;HaplotypeScore=115.1783;InbreedingCoeff=0.4552;MQ=49.44;MQ0=85;MQRankSum=-5.364;QD=13.69;ReadPosRankSum=-2.474;VQSLOD=1.8862;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:37:90.25:0,90,2300	0/0:8,0:8:9.09:0,9,550	0/0:52,0:7:21:0,21,342	0/0:55,0:11:33.02:0,33,649	0/0:16,0:14:33.11:0,33,884	0/0:20,0:20:57.16:0,57,1392	0/0:39,0:37:84.30:0,84,2557	0/1:5,7:7:24.81:197,0,25	0/0:39,0:37:99:0,111,2642	0/0:44,0:35:99:0,105,2550	0/0:15,0:15:33.11:0,33,889	0/0:31,0:24:54.18:0,54,1399	0/0:33,0:32:96.33:0,96,2565	0/0:52,0:51:99:0,147,3853	0/0:50,0:47:99:0,132,3508	0/0:28,0:26:75.23:0,75,1902	0/0:33,0:30:59.51:0,60,1773	0/0:34,0:30:59.73:0,60,1788	0/1:4,7:10:49.81:311,0,50	1/1:1,2:3:2.98:56,3,0	0/1:2,8:7:0:1,0,0	0/0:32,0:29:71.44:0,71,1738	0/0:18,0:18:38.87:0,39,988	0/0:32,0:31:93.28:0,93,2379	0/0:29,0:25:78.25:0,78,1982	0/0:40,0:35:99:0,105,2673	1/1:0,1:1:3.01:56,3,0	0/0:11,0:11:33.11:0,33,838
chr10	107690757	.	G	GTCCA	261.05	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=4.837;DP=742;FS=3.257;HRun=0;HaplotypeScore=127.7251;InbreedingCoeff=0.7870;MQ=53.05;MQ0=52;MQRankSum=-4.745;QD=14.50;ReadPosRankSum=-0.255;VQSLOD=3.2065;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:60.10:0,60,920	0/0:10,0:10:26.77:0,27,447	0/0:44,0:7:18.06:0,18,305	0/0:52,0:12:29.98:0,30,414	0/0:11,0:11:21.07:0,21,358	0/0:19,0:18:48.14:0,48,753	0/0:38,0:38:78.27:0,78,1305	1/1:7,0:5:5.98:84,6,0	0/0:37,0:37:87.30:0,87,1468	0/0:44,0:40:90.16:0,90,1437	0/0:9,0:9:15.04:0,15,230	./.	0/0:33,0:33:84.28:0,84,1412	0/0:57,0:56:99:0,120,1983	0/0:46,0:45:99:0,117,1990	0/0:38,0:38:81.54:0,82,1373	0/0:33,0:33:40.44:0,40,1187	0/0:27,0:24:38.20:0,38,902	1/1:4,2:6:6.49:151,6,0	1/1:2,1:4:3.48:76,3,0	0/0:3,11:10:0:0,0,1	0/0:29,0:28:84.29:0,84,1433	0/0:19,0:17:42.14:0,42,703	0/0:38,0:37:87.28:0,87,1437	0/0:28,0:25:42.12:0,42,681	0/0:34,0:32:78.25:0,78,1274	1/1:0,1:1:3.01:75,3,0	0/0:16,0:16:45.15:0,45,754
chr10	107691100	.	C	CTTACTCAT	11155.74	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-8.937;DP=779;FS=6.713;HRun=0;HaplotypeScore=194.2385;InbreedingCoeff=0.9749;MQ=74.40;MQ0=0;MQRankSum=-12.294;QD=74.37;ReadPosRankSum=-3.614;VQSLOD=3.6202;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,132,3220	0/0:9,0:9:27.09:0,27,672	0/0:46,0:45:99:0,107,2341	0/0:33,0:33:70.75:0,71,1572	0/0:11,0:11:27.09:0,27,686	0/0:25,0:25:71.20:0,71,1475	0/0:26,0:26:60.29:0,60,1629	1/1:14,26:46:99:3830,120,0	0/0:27,0:27:68.24:0,68,1840	0/0:33,0:32:87.28:0,87,2207	0/0:20,0:20:57.18:0,57,1485	0/0:26,0:26:72.23:0,72,1879	0/0:28,0:28:75.26:0,75,1955	0/0:26,0:26:78.27:0,78,2084	0/0:33,0:33:84.22:0,84,1920	0/0:24,0:24:69.21:0,69,1692	0/0:21,0:21:54.15:0,54,1347	0/0:29,0:29:68.10:0,68,1778	1/1:7,16:22:6.27:1993,6,0	1/1:2,23:27:63.14:2028,63,0	1/1:6,13:22:20.92:520,21,0	0/0:32,0:31:87.30:0,87,2259	0/0:23,0:23:66.23:0,66,1695	0/0:37,0:37:90.31:0,90,2345	0/0:20,0:20:57.18:0,57,1398	0/0:35,0:35:99:0,99,2638	1/1:7,24:32:69.19:2785,69,0	0/0:14,0:14:42.14:0,42,1137
chr10	107691547	.	G	GA	4995.06	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.524;DP=683;FS=16.016;HRun=2;HaplotypeScore=81.1990;InbreedingCoeff=0.9861;MQ=88.40;MQ0=0;MQRankSum=-2.023;QD=38.72;ReadPosRankSum=-0.790;VQSLOD=3.0692;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.23:0,81,989	0/0:3,0:3:9.03:0,9,112	0/0:23,0:23:60.18:0,60,724	0/0:25,0:25:69.22:0,69,853	0/0:20,0:20:60.17:0,60,730	0/0:23,0:23:60.19:0,60,744	0/0:34,0:34:99:0,99,1198	1/1:0,22:22:66.20:915,66,0	0/0:26,0:26:72.23:0,72,892	0/0:20,0:20:57.18:0,57,707	0/0:13,0:13:36.11:0,36,446	0/0:33,0:33:99:0,99,1227	0/0:28,0:28:81.25:0,81,1003	0/0:36,0:36:99:0,105,1262	0/0:39,0:39:99:0,111,1363	0/0:26,0:26:72.23:0,72,892	0/0:38,0:38:99:0,114,1398	0/0:23,0:23:66.21:0,66,818	1/1:1,28:29:84.26:1186,84,0	1/1:0,20:20:51.17:734,51,0	1/1:1,35:36:99:1426,99,0	0/0:26,0:26:78.23:0,78,953	0/0:19,0:19:54.15:0,54,655	0/0:26,0:26:78.25:0,78,967	0/0:14,0:14:39.12:0,39,484	0/0:22,0:21:63.20:0,63,781	1/1:1,21:22:51.17:734,51,0	0/0:8,0:8:24.08:0,24,297
chr10	107691859	.	T	TA	4723.04	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.483;DP=607;FS=0.000;HRun=0;HaplotypeScore=78.0254;InbreedingCoeff=0.9997;MQ=87.19;MQ0=0;MQRankSum=-1.728;QD=43.33;ReadPosRankSum=0.056;VQSLOD=5.0846;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1528	0/0:9,0:9:27.09:0,27,377	0/0:24,0:24:69.05:0,69,904	0/0:21,0:21:60.14:0,60,752	0/0:23,0:23:66.18:0,66,897	0/0:17,0:17:48.16:0,48,661	0/0:35,0:35:99:0,105,1431	1/1:0,24:24:69.20:1057,69,0	0/0:22,0:22:66.22:0,66,922	0/0:16,0:16:48.16:0,48,671	0/0:13,0:13:36.12:0,36,504	0/0:29,0:29:84.28:0,84,1173	0/0:15,0:15:45.13:0,45,607	0/0:18,0:18:54.17:0,54,735	0/0:16,0:16:45.15:0,45,629	0/0:14,0:14:42.14:0,42,587	0/0:22,0:22:63.21:0,63,881	0/0:34,0:34:99:0,102,1407	1/1:3,10:13:36.12:560,36,0	1/1:0,20:20:51.17:815,51,0	1/1:0,35:35:93.32:1487,93,0	0/0:28,0:28:84.28:0,84,1174	0/0:14,0:14:36.12:0,36,500	0/0:29,0:29:87.24:0,87,1177	0/0:21,0:21:63.20:0,63,866	0/0:21,0:21:63.20:0,63,862	1/1:1,16:17:51.17:804,51,0	0/0:19,0:19:57.19:0,57,797
chr10	107692590	.	CG	C	4141.16	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.344;DP=633;FS=0.000;HRun=3;HaplotypeScore=69.0303;InbreedingCoeff=0.9971;MQ=88.37;MQ0=0;MQRankSum=-1.101;QD=30.68;ReadPosRankSum=-1.727;VQSLOD=2.7550;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.02:0,90,1173	0/0:6,0:6:18.06:0,18,257	0/0:28,0:28:74.69:0,75,860	0/0:26,1:27:69.96:0,70,936	0/0:14,0:14:42.13:0,42,579	0/0:24,0:24:72.22:0,72,1009	0/0:29,0:29:87.04:0,87,1129	1/1:1,27:28:78.07:885,78,0	0/0:16,0:16:45.12:0,45,607	0/0:18,0:18:54.17:0,54,742	0/0:16,0:16:48.14:0,48,641	0/0:25,0:25:69.22:0,69,964	0/0:19,0:19:57.11:0,57,763	0/0:15,0:15:42.13:0,42,581	0/0:21,0:21:60.19:0,60,837	0/0:17,0:17:51.14:0,51,707	0/0:39,0:39:99:0,108,1501	0/0:29,0:29:81.21:0,81,1116	1/1:2,34:36:99:1137,99,0	1/1:0,14:14:38.86:454,39,0	1/1:2,36:38:93.29:1149,93,0	0/0:26,0:26:77.12:0,77,1046	0/0:12,0:12:36.11:0,36,494	0/0:32,0:32:87.24:0,87,1187	0/0:30,0:30:87.27:0,87,1219	0/0:17,0:17:48.15:0,48,667	1/1:0,19:19:41.97:517,42,0	0/0:7,0:7:21.05:0,21,280
chr10	107693694	.	G	GTGT	492.77	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=11.415;DP=579;FS=3.146;HRun=0;HaplotypeScore=99.7754;InbreedingCoeff=0.4960;MQ=65.02;MQ0=0;MQRankSum=-6.593;QD=6.08;ReadPosRankSum=-2.518;VQSLOD=1.4970;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.04:0,90,1376	0/0:11,0:11:33.07:0,33,486	0/0:28,0:25:56.25:0,56,863	0/0:14,0:10:26.96:0,27,342	0/0:28,0:28:78.24:0,78,1222	0/0:20,0:20:57.19:0,57,905	0/0:37,0:37:99:0,99,1584	1/1:15,0:15:22.41:66,22,0	0/0:21,0:21:57.19:0,57,924	0/0:23,0:23:66.21:0,66,1031	0/0:22,0:22:66.20:0,66,1028	1/1:0,9:9:21.07:450,21,0	0/0:18,0:18:51.16:0,51,803	0/0:22,0:22:57.19:0,57,905	0/0:21,0:21:60.18:0,60,930	0/0:17,0:16:51.17:0,51,832	0/0:26,0:26:69.16:0,69,1045	0/0:31,0:31:90.19:0,90,1373	0/1:14,0:14:24.81:25,0,59	0/1:23,0:23:18.90:56,0,19	0/1:9,0:9:1.74:21,0,2	0/0:18,0:18:48.15:0,48,756	0/0:26,0:26:78.23:0,78,1201	0/0:23,0:23:69.22:0,69,1094	0/0:15,0:15:45.15:0,45,713	0/0:32,0:32:84.24:0,84,1278	0/1:11,0:11:21.36:21,0,39	0/0:13,0:13:21.07:0,21,343
chr10	107693696	.	G	GTT	2470.01	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.489;DP=587;FS=9.576;HRun=8;HaplotypeScore=84.3194;InbreedingCoeff=0.9956;MQ=64.92;MQ0=0;MQRankSum=-8.234;QD=28.39;ReadPosRankSum=-4.334;VQSLOD=1.9623;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.22:0,84,936	0/0:11,0:11:33.07:0,33,359	0/0:28,0:25:30.69:0,31,516	0/0:14,0:10:21:0,21,207	0/0:28,0:28:78.18:0,78,851	0/0:20,0:20:54.13:0,54,602	0/0:38,0:38:99:0,99,1103	1/1:3,12:15:38.68:554,39,0	0/0:22,0:22:60.13:0,60,659	0/0:23,0:23:60.16:0,60,669	0/0:22,0:22:63.17:0,63,701	1/1:9,0:9:20.94:166,21,0	0/0:18,0:18:48.13:0,48,534	0/0:22,0:22:57.04:0,57,622	0/0:23,0:23:60.12:0,60,659	0/0:19,0:18:51.11:0,51,568	0/0:27,0:27:66.12:0,66,716	0/0:31,0:31:84.21:0,84,932	1/1:7,9:18:36.03:484,36,0	1/1:6,17:23:48.16:760,48,0	1/1:3,6:9:18.06:286,18,0	0/0:18,0:18:45.12:0,45,502	0/0:26,0:26:75.18:0,75,827	0/0:23,0:23:66.15:0,66,724	0/0:15,0:15:42.11:0,42,468	0/0:29,0:30:75.18:0,75,829	1/1:6,7:13:30.07:409,30,0	0/0:10,0:10:21.04:0,21,234
chr10	107693748	.	TTGTCTTCAGA	T	535.55	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.731;DP=682;FS=7.315;HRun=0;HaplotypeScore=209.0314;InbreedingCoeff=0.9917;MQ=60.87;MQ0=4;MQRankSum=-3.943;QD=53.56;ReadPosRankSum=1.683;VQSLOD=2.7689;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,5704	0/0:13,0:13:39.13:0,39,2090	0/0:29,0:21:63.17:0,63,2301	0/0:37,0:33:92.68:0,93,3651	0/0:24,0:24:72.25:0,72,3717	0/0:20,0:20:57.20:0,57,2902	0/0:32,0:32:96.33:0,96,5114	0/0:27,0:22:60.20:0,60,2799	0/0:37,0:37:99:0,111,5923	0/0:23,0:23:69.24:0,69,3617	0/0:24,0:24:72.25:0,72,3801	1/1:0,10:10:18.06:626,18,0	0/0:21,0:21:60.21:0,60,3254	0/0:22,0:22:63.22:0,63,3306	0/0:30,0:30:90.31:0,90,4947	0/0:25,0:23:72.25:0,72,3862	0/0:26,0:26:75.73:0,76,4050	0/0:24,0:24:69.22:0,69,3309	0/0:22,0:20:60.21:0,60,3206	0/0:27,0:27:78.27:0,78,4186	0/0:21,0:20:57.20:0,57,2981	0/0:24,0:24:72.25:0,72,3723	0/0:30,0:30:90.31:0,90,4707	0/0:28,0:28:78.26:0,78,4003	0/0:16,0:16:48.16:0,48,2578	0/0:25,0:25:75.24:0,75,3921	0/0:15,0:15:45.15:0,45,2453	0/0:12,0:12:36.12:0,36,1979
chr10	107694130	.	A	AT	923.64	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.296;DP=713;FS=0.720;HRun=6;HaplotypeScore=70.2277;InbreedingCoeff=0.9984;MQ=71.99;MQ0=0;MQRankSum=-0.990;QD=29.79;ReadPosRankSum=0.936;VQSLOD=4.2882;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,132,1329	0/0:10,0:10:27.06:0,27,275	0/0:19,0:20:55.94:0,56,553	0/0:19,0:19:43.56:0,44,456	0/0:25,0:25:66.13:0,66,666	0/0:25,0:25:72.10:0,72,716	0/0:20,0:20:54.12:0,54,551	0/0:23,0:23:60.13:0,60,612	0/0:20,0:20:54.10:0,54,544	0/0:31,0:30:84.18:0,84,855	0/0:12,0:12:33.07:0,33,336	1/1:1,30:31:81.26:1019,81,0	0/0:26,0:26:72.15:0,72,727	0/0:23,0:23:36.66:0,37,586	0/0:30,0:30:87.17:0,87,872	0/0:35,0:35:93.18:0,93,936	0/0:21,0:21:60.13:0,60,612	0/0:34,0:34:93.17:0,93,937	0/0:23,0:23:60.12:0,60,605	0/0:22,0:22:63.14:0,63,642	0/0:26,0:26:72.16:0,72,734	0/0:19,0:19:45.05:0,45,447	0/0:25,0:25:69.16:0,69,704	0/0:30,0:30:87.20:0,87,888	0/0:27,0:27:78.07:0,78,768	0/0:36,0:36:96.21:0,96,979	0/0:39,0:39:99:0,108,1093	0/0:12,0:12:36.08:0,36,367
chr10	107695028	.	CT	C	4317.85	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.971;DP=649;FS=9.079;HRun=3;HaplotypeScore=85.1449;InbreedingCoeff=0.9926;MQ=79.14;MQ0=0;MQRankSum=-1.138;QD=31.52;ReadPosRankSum=-0.719;VQSLOD=4.1853;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,1812	0/0:9,0:9:27.09:0,27,387	0/0:18,0:18:49.55:0,50,586	0/0:21,0:21:63.20:0,63,865	0/0:17,0:17:51.17:0,51,734	0/0:16,0:16:36.12:0,36,513	0/0:32,0:32:87.26:0,87,1219	1/1:3,21:24:63.17:756,63,0	0/0:20,0:20:48.16:0,48,690	0/0:25,0:24:75.21:0,75,1042	0/0:13,0:13:39.12:0,39,541	0/0:20,0:20:54.15:0,54,754	0/0:20,0:20:60.10:0,60,814	0/0:30,0:30:78.22:0,78,1097	0/0:26,0:26:75.18:0,75,1020	0/0:13,0:13:39.13:0,39,561	0/0:44,0:44:99:0,132,1849	0/0:24,0:24:60.20:0,60,861	1/1:2,20:22:54.15:645,54,0	1/1:0,17:17:47.22:576,47,0	1/1:2,34:36:84.26:1041,84,0	0/0:25,1:26:41.23:0,41,1024	0/0:17,0:17:48.15:0,48,668	0/0:29,0:29:69.23:0,69,993	0/0:18,0:18:51.16:0,51,718	0/0:27,0:27:78.26:0,78,1122	1/1:3,35:38:99:1300,105,0	0/0:4,0:4:12.04:0,12,173
chr10	107695724	.	T	TA	3946.80	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.992;DP=485;FS=0.000;HRun=5;HaplotypeScore=67.7478;InbreedingCoeff=0.9906;MQ=73.99;MQ0=0;MQRankSum=1.565;QD=37.23;ReadPosRankSum=-2.180;VQSLOD=2.3121;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.24:0,75,966	0/0:12,0:12:27.09:0,27,350	0/0:14,0:14:37.33:0,37,441	0/0:10,0:11:12.27:0,12,299	0/0:12,0:12:33.11:0,33,424	0/0:19,0:19:48.07:0,48,616	0/0:18,0:18:54.18:0,54,697	1/1:2,29:31:84.25:1138,84,0	0/0:7,0:7:18.06:0,18,232	0/0:17,0:17:42.11:0,42,521	0/0:22,0:22:60.19:0,60,769	0/0:18,0:18:48.15:0,48,617	0/0:15,0:15:42.14:0,42,538	0/0:13,0:13:39.13:0,39,505	0/0:18,0:18:44.97:0,45,578	0/0:12,0:12:36.12:0,36,465	0/0:26,0:26:78.22:0,78,984	0/0:15,0:15:33.11:0,33,428	1/1:0,10:10:30.10:427,30,0	1/1:2,21:23:53.67:758,54,0	1/1:0,31:31:87.29:1221,87,0	0/0:20,0:20:60.19:0,60,763	0/0:10,0:10:30.10:0,30,388	0/0:16,0:16:42.13:0,42,537	0/0:18,0:18:51.16:0,51,655	0/0:24,0:24:69.22:0,69,890	1/1:2,9:11:32.99:402,33,0	0/0:17,0:17:45.15:0,45,583
chr10	107699071	.	GCA	G	391.34	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.068;DP=549;FS=11.642;HRun=0;HaplotypeScore=67.1362;InbreedingCoeff=0.9681;MQ=90.97;MQ0=0;MQRankSum=-1.689;QD=32.61;ReadPosRankSum=1.242;VQSLOD=5.1433;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.24:0,78,1398	0/0:5,0:5:15.01:0,15,245	0/0:19,0:19:51.17:0,51,939	0/0:25,0:25:70.65:0,71,1274	0/0:14,0:14:42.14:0,42,783	0/0:20,0:20:60.21:0,60,1117	0/0:21,0:21:60.16:0,60,1016	0/0:24,0:24:66.22:0,66,1233	0/0:22,0:22:66.21:0,66,1204	0/0:7,0:7:21.07:0,21,377	0/0:13,0:13:39.13:0,39,727	1/1:0,12:12:33.11:486,33,0	0/0:24,0:24:69.19:0,69,1178	0/0:29,0:29:87.30:0,87,1629	0/0:28,0:28:84.29:0,84,1565	0/0:25,0:25:66.20:0,66,1196	0/0:22,0:22:66.23:0,66,1228	0/0:35,0:35:96.29:0,96,1729	0/0:19,0:19:57.20:0,57,1057	0/0:17,0:17:48.16:0,48,882	0/0:22,0:22:60.19:0,60,1085	0/0:10,0:10:30.10:0,30,551	0/0:13,0:13:36.12:0,36,666	0/0:23,0:23:69.21:0,69,1259	0/0:7,0:7:18.06:0,18,337	0/0:20,0:19:60.20:0,60,1075	0/0:39,0:39:81.26:0,81,1484	0/0:7,0:7:21.07:0,21,393
chr10	107699142	.	TCTTTTTTTC	T	4699.66	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.502;DP=616;FS=2.776;HRun=0;HaplotypeScore=160.6149;InbreedingCoeff=0.9752;MQ=64.87;MQ0=6;MQRankSum=-3.548;QD=45.63;ReadPosRankSum=-3.493;VQSLOD=4.2733;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,4386	0/0:11,0:11:33.11:0,33,1399	0/0:40,0:21:40.39:0,40,743	0/0:26,0:10:8.37:0,8,355	0/0:28,0:28:83.56:0,84,3139	0/0:25,0:25:75.26:0,75,2727	0/0:18,0:18:54.19:0,54,2353	1/1:0,26:25:71.20:1501,71,0	0/0:23,0:23:66.20:0,66,2566	0/0:17,0:17:51.18:0,51,1995	0/0:22,0:22:37.54:0,38,2225	0/0:12,0:12:33.10:0,33,526	0/0:15,0:15:45.14:0,45,1639	0/0:17,0:17:35.19:0,35,1939	0/0:28,0:28:84.29:0,84,3202	0/0:20,0:20:60.21:0,60,2259	0/0:19,0:18:57.20:0,57,2402	0/0:31,0:31:93.26:0,93,3193	1/1:1,24:25:75.18:1527,75,0	1/1:0,17:17:32.71:780,33,0	1/1:0,13:13:12.04:333,12,0	0/0:23,0:23:69.22:0,69,2594	0/0:27,0:27:78.26:0,78,3002	0/0:20,0:20:60.21:0,60,2365	0/0:23,0:22:59.94:0,60,2063	0/0:22,0:22:66.23:0,66,2667	1/1:0,22:22:18.39:559,18,0	0/0:9,0:9:27.09:0,27,932
chr10	107699147	.	TTTTC	T	1556.20	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.706;DP=621;FS=6.950;HRun=0;HaplotypeScore=113.3211;InbreedingCoeff=0.8970;MQ=60.71;MQ0=7;MQRankSum=-6.440;QD=13.53;ReadPosRankSum=-2.576;VQSLOD=2.1335;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.33:0,96,2270	0/0:12,0:12:30.09:0,30,664	0/0:35,0:16:8.96:0,9,70	0/0:28,0:10:3.01:0,3,71	0/0:29,0:29:72.19:0,72,1578	0/0:27,0:27:62.16:0,62,1281	0/0:18,0:18:51.10:0,51,1007	1/1:26,0:25:39.35:389,39,0	0/0:21,0:21:51.16:0,51,1154	0/0:22,0:22:48.15:0,48,987	0/0:23,0:23:57.19:0,57,1175	1/1:4,8:12:27.08:419,27,0	0/0:18,0:18:0.73:0,1,938	0/0:16,0:16:36.11:0,36,790	0/0:25,0:25:63.22:0,63,1439	0/0:21,0:21:45.15:0,45,1024	0/0:20,0:19:51.15:0,51,1152	0/0:30,0:30:66.16:0,66,1385	1/1:25,0:25:42.31:345,42,0	1/1:17,0:17:29.97:307,30,0	1/1:13,0:13:11.73:85,12,0	0/0:23,0:23:54.16:0,54,1173	0/0:28,0:28:72.16:0,72,1590	0/0:20,0:20:45.14:0,45,1011	0/0:24,0:23:42.05:0,42,846	0/0:22,0:22:48.11:0,48,1104	1/1:22,0:22:17.74:194,18,0	0/0:7,0:7:14.88:0,15,295
chr10	107699790	.	A	ATAAAAAAGGCTAAGCAGTAATTTG	43195.97	PASS	AB=0.863;AC=49;AF=0.907;AN=54;BaseQRankSum=-5.503;DP=285;FS=13.997;HRun=0;HaplotypeScore=353.1661;InbreedingCoeff=-0.0976;MQ=53.23;MQ0=0;MQRankSum=-0.263;QD=151.56;ReadPosRankSum=0.887;VQSLOD=3.7560;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:10:2.79:1145,0,3	1/1:13,0:13:38.16:1917,38,0	0/1:1,1:3:22.43:429,0,22	0/1:3,0:5:21.14:261,0,21	1/1:14,0:14:28.90:859,29,0	1/1:13,0:13:15.44:2870,15,0	1/1:7,0:7:18.06:1059,18,0	1/1:7,0:7:18.53:1027,19,0	1/1:8,0:8:10.97:1822,11,0	1/1:20,0:20:58.75:4182,59,0	1/1:7,0:7:17.08:1117,17,0	1/1:12,0:12:25.75:1731,26,0	1/1:9,0:9:27.08:1522,27,0	1/1:14,0:14:12.42:1782,12,0	1/1:13,0:13:12.78:2232,13,0	0/1:7,0:7:4.59:627,0,5	1/1:12,0:12:32.87:1593,33,0	./.	1/1:9,0:9:27.09:2077,27,0	1/1:11,0:11:32.11:1075,32,0	1/1:7,0:7:21.07:1056,21,0	1/1:14,0:14:10.60:1724,11,0	1/1:11,0:11:33.11:1962,33,0	1/1:13,0:13:33.11:2599,33,0	0/1:11,0:11:39.68:1044,0,40	1/1:14,0:14:37.68:2544,38,0	1/1:17,0:17:23.54:1700,24,0	1/1:4,0:4:12.04:1240,12,0
chr10	107700162	.	TTAAAC	T	314.65	PASS	AB=0.771;AC=4;AF=0.071;AN=56;BaseQRankSum=5.070;DP=440;FS=22.083;HRun=0;HaplotypeScore=85.8137;InbreedingCoeff=-0.0807;MQ=75.35;MQ0=0;MQRankSum=-3.885;QD=7.49;ReadPosRankSum=-2.672;VQSLOD=-0.5354;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,4038	0/0:3,0:3:9.03:0,9,235	0/0:18,0:18:54.19:0,54,1616	0/0:17,0:17:45.11:0,45,1260	0/0:16,0:16:42.14:0,42,1329	0/0:22,0:22:66.23:0,66,2069	0/0:15,0:15:45.15:0,45,1381	0/1:8,3:11:30.57:31,0,326	0/0:13,0:13:39.13:0,39,1216	0/0:23,0:23:66.23:0,66,2068	0/0:8,0:8:24.08:0,24,755	0/0:20,0:20:33.11:0,33,1022	0/0:17,0:17:51.18:0,51,1602	0/0:28,0:28:84.27:0,84,2590	0/0:9,0:9:27.09:0,27,873	0/0:11,0:11:33.11:0,33,1046	0/0:32,0:32:90.31:0,90,2898	0/0:20,0:20:57.20:0,57,1820	0/1:5,4:9:75.93:76,0,142	0/0:4,0:4:12.04:0,12,294	0/1:4,1:5:80.23:80,0,183	0/0:10,0:10:30.10:0,30,968	0/0:11,0:11:30.10:0,30,897	0/0:19,0:19:57.20:0,57,1813	0/0:14,0:14:42.14:0,42,1289	0/0:15,0:15:42.13:0,42,1284	0/1:12,5:17:99:237,0,673	0/0:9,0:9:24.08:0,24,754
chr10	107700388	.	C	CT	144.16	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.753;DP=358;FS=1.109;HRun=9;HaplotypeScore=46.1751;InbreedingCoeff=0.4282;MQ=79.52;MQ0=1;MQRankSum=0.903;QD=8.48;ReadPosRankSum=-0.689;VQSLOD=0.8995;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:56.97:0,57,492	1/1:3,7:10:21.06:232,21,0	0/0:17,0:15:14.09:0,14,147	0/0:13,0:11:4.06:0,4,70	0/0:15,0:15:29.97:0,30,258	0/0:17,0:17:44.98:0,45,391	0/0:8,0:8:24:0,24,208	0/0:30,0:30:40.09:0,40,196	0/0:11,0:11:26.98:0,27,234	0/0:12,0:12:26.99:0,27,234	0/0:12,0:12:35.99:0,36,310	0/0:4,0:4:9:0,9,78	0/0:6,0:6:15:0,15,130	0/0:8,0:8:14.99:0,15,130	0/0:7,0:7:21:0,21,182	0/0:9,0:9:23.99:0,24,208	0/0:23,0:23:62.91:0,63,533	0/0:31,0:31:83.90:0,84,713	0/0:26,0:25:4.62:0,5,163	0/0:9,0:9:19.55:0,20,100	0/1:7,0:7:13.34:13,0,29	0/0:5,0:5:12:0,12,104	0/0:13,0:13:35.99:0,36,313	0/0:2,0:2:6:0,6,52	0/0:9,0:9:26.99:0,27,232	0/0:15,0:15:44.99:0,45,391	0/0:7,0:7:5.45:0,5,27	0/0:9,0:9:23.99:0,24,208
chr10	107700444	.	AATTTT	A	2545.33	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=9.087;DP=313;FS=2.176;HRun=0;HaplotypeScore=64.3598;InbreedingCoeff=0.8789;MQ=68.94;MQ0=3;MQRankSum=-0.782;QD=34.87;ReadPosRankSum=-0.943;VQSLOD=3.1523;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:33.09:0,33,832	0/0:3,0:3:6.02:0,6,178	0/0:11,0:8:21.06:0,21,426	0/0:18,0:13:18.53:0,19,417	0/0:15,0:15:33.11:0,33,760	0/0:18,0:18:51.15:0,51,1192	0/0:4,0:4:6.02:0,6,118	1/1:6,22:28:66.20:1187,66,0	0/0:7,0:7:18.06:0,18,499	0/0:16,0:16:48.12:0,48,1160	0/0:7,0:7:18.06:0,18,484	1/1:1,7:8:12.04:238,12,0	0/0:6,0:6:18.06:0,18,448	0/0:6,0:6:15.05:0,15,339	0/0:9,0:9:24.08:0,24,597	0/0:9,0:9:24.08:0,24,593	0/0:27,0:27:72.25:0,72,1942	0/0:35,0:35:99:0,99,2637	1/1:3,9:12:27.09:500,27,0	1/1:2,11:13:30.03:498,30,0	1/1:0,2:2:3.01:59,3,0	0/0:3,0:3:9.03:0,9,232	0/0:5,0:5:12.04:0,12,340	./.	0/0:10,0:10:24.08:0,24,629	0/0:10,0:10:21.07:0,21,585	1/1:0,10:10:12.04:238,12,0	0/0:9,0:9:24.08:0,24,561
chr10	107700584	.	G	GCA	3061.83	PASS	AB=0.917;AC=11;AF=0.196;AN=56;BaseQRankSum=4.271;DP=552;FS=23.245;HRun=0;HaplotypeScore=72.3943;InbreedingCoeff=0.8621;MQ=74.67;MQ0=0;MQRankSum=-1.008;QD=22.85;ReadPosRankSum=0.852;VQSLOD=1.9986;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,102,1192	0/0:4,0:4:8.99:0,9,95	0/0:13,0:12:21.82:0,22,264	0/0:31,0:30:54.06:0,54,554	0/0:5,0:5:12:0,12,132	0/0:25,0:25:63.17:0,63,761	0/0:22,0:22:54.16:0,54,663	1/1:9,17:27:19.56:769,20,0	0/0:18,0:18:45.07:0,45,509	0/1:10,1:11:19.37:19,0,307	0/0:8,0:9:26.90:0,27,300	0/0:22,0:22:63.16:0,63,769	0/0:15,0:15:45.02:0,45,479	0/0:16,0:17:44.85:0,45,487	0/0:21,0:21:54.16:0,54,662	0/0:19,0:19:51.12:0,51,620	0/0:35,0:35:84.11:0,84,959	0/0:41,1:42:91.26:0,91,1296	1/1:4,11:15:33.05:467,33,0	1/1:2,10:13:15.05:247,15,0	1/1:13,42:55:52.80:1395,53,0	0/0:11,0:11:30.06:0,30,359	0/0:10,0:10:20.90:0,21,239	0/0:24,0:24:69.14:0,69,816	0/0:14,0:14:36.11:0,36,449	0/0:11,0:11:33.06:0,33,394	1/1:1,10:12:21.07:342,21,0	0/0:9,0:10:26.92:0,27,313
chr10	107701010	.	C	CT	1481.12	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.308;DP=416;FS=0.503;HRun=2;HaplotypeScore=56.4579;InbreedingCoeff=0.8622;MQ=58.60;MQ0=6;MQRankSum=-3.873;QD=16.64;ReadPosRankSum=-2.829;VQSLOD=2.7018;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.21:0,66,814	0/0:7,0:7:21.01:0,21,240	0/0:8,0:3:2.30:0,2,8	0/0:6,0:3:2.03:0,2,45	0/0:24,0:24:69.19:0,69,826	0/0:17,0:17:45.08:0,45,525	0/0:16,0:13:36.03:0,36,424	1/1:35,0:28:32.68:543,33,0	0/0:9,0:9:24.01:0,24,264	0/0:14,0:14:42.07:0,42,473	0/0:13,0:13:29.80:0,30,346	1/1:5,5:9:7.86:268,8,0	0/0:4,0:4:12.04:0,12,147	0/0:7,0:7:18.06:0,18,222	0/0:7,0:7:18:0,18,194	0/0:12,0:12:35.57:0,36,382	0/0:36,0:36:96.22:0,96,1143	0/0:19,0:19:54.11:0,54,633	1/1:17,0:14:41.93:352,42,0	1/1:7,0:7:20.77:165,21,0	1/1:6,0:6:17.26:124,17,0	0/0:2,0:2:3.01:0,3,37	0/0:13,0:13:38.92:0,39,397	0/0:5,0:5:12.04:0,12,148	0/0:25,0:25:69.18:0,69,826	0/0:30,0:30:84.16:0,84,966	1/1:14,0:14:25.31:210,25,0	0/0:30,0:30:86.94:0,87,1072
chr10	107701022	.	AG	A	2567.47	PASS	AB=0.854;AC=14;AF=0.250;AN=56;BaseQRankSum=13.047;DP=433;FS=10.917;HRun=1;HaplotypeScore=51.8907;InbreedingCoeff=0.7539;MQ=59.90;MQ0=3;MQRankSum=-5.623;QD=22.72;ReadPosRankSum=-3.702;VQSLOD=1.6287;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.17:0,78,947	0/0:6,0:6:18.06:0,18,232	0/0:11,0:6:6.52:0,7,98	0/0:6,0:3:6.02:0,6,78	0/0:23,0:23:69.20:0,69,853	0/0:18,1:19:13.87:0,14,563	0/0:12,2:12:36.12:0,36,464	1/1:5,34:36:71.08:1163,71,0	0/1:6,1:7:19.51:20,0,212	0/0:16,0:16:45.07:0,45,529	0/0:16,0:16:41.85:0,42,479	1/1:10,1:10:22.91:130,23,0	0/0:6,0:6:18.03:0,18,203	0/0:8,0:8:21.06:0,21,257	0/1:4,0:5:6.06:6,0,140	0/0:10,0:10:11.93:0,12,313	0/0:32,1:33:56:0,56,1111	0/0:21,0:21:60.07:0,60,687	1/1:2,15:14:42.07:512,42,0	1/1:1,7:8:23.99:287,24,0	1/1:0,9:9:18.03:228,18,0	0/0:3,0:3:9.02:0,9,102	0/0:8,0:9:5.99:0,6,283	0/0:7,0:7:21.05:0,21,254	0/0:28,0:28:79.41:0,79,1011	0/0:24,0:24:72.22:0,72,907	1/1:0,17:17:30.09:410,30,0	0/0:33,0:33:99:0,99,1219
chr10	107702045	.	GA	G	4910.79	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.170;DP=780;FS=3.228;HRun=7;HaplotypeScore=77.3560;InbreedingCoeff=1.0000;MQ=83.69;MQ0=0;MQRankSum=-2.657;QD=27.13;ReadPosRankSum=0.077;VQSLOD=5.4486;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,153,1925	0/0:15,0:15:39.10:0,39,475	0/0:29,0:29:64.03:0,64,771	0/0:26,0:26:66.20:0,66,809	0/0:23,0:23:54.17:0,54,679	0/0:27,0:27:78.25:0,78,981	0/0:30,0:30:84.26:0,84,1044	1/1:3,25:27:72.13:720,72,0	0/0:37,0:37:99:0,105,1295	0/0:34,0:34:99:0,99,1234	0/0:24,0:24:66.21:0,66,830	1/1:2,36:38:99:1071,105,0	0/0:21,0:21:57.18:0,57,716	0/0:28,0:28:75.19:0,75,913	0/0:36,0:36:99:0,102,1283	0/0:20,0:20:57.18:0,57,717	0/0:27,0:27:81.25:0,81,1007	0/0:14,0:14:42.13:0,42,528	1/1:0,18:18:54.12:551,54,0	1/1:2,21:23:63.14:641,63,0	1/1:3,33:36:90.20:917,90,0	0/0:25,0:25:72.20:0,72,879	0/0:34,0:34:99:0,102,1266	0/0:35,0:35:99:0,102,1281	0/0:19,0:19:48.15:0,48,604	0/0:30,0:30:87.28:0,87,1089	1/1:3,35:38:99:1010,99,0	0/0:13,0:13:39.12:0,39,491
chr10	107702478	.	CA	C	4643.92	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.280;DP=649;FS=13.127;HRun=4;HaplotypeScore=74.3375;InbreedingCoeff=0.9997;MQ=75.55;MQ0=1;MQRankSum=-1.105;QD=31.38;ReadPosRankSum=0.124;VQSLOD=4.1320;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,1765	0/0:9,0:9:27.07:0,27,348	0/0:20,0:19:51.12:0,51,667	0/0:22,0:23:55.31:0,55,705	0/0:15,0:15:45.15:0,45,627	0/0:19,0:19:57.18:0,57,781	0/0:27,0:27:81.25:0,81,1099	1/1:3,28:30:84.24:996,84,0	0/0:17,0:17:51.17:0,51,713	0/0:15,0:15:45.15:0,45,630	0/0:25,0:25:75.21:0,75,988	0/0:21,0:21:63.20:0,63,865	0/0:19,0:19:57.17:0,57,779	0/0:23,0:23:63.21:0,63,882	0/0:27,0:27:78.24:0,78,1058	0/0:18,0:18:54.18:0,54,756	0/0:36,0:36:99:0,108,1493	0/0:14,0:14:42.14:0,42,588	1/1:0,18:18:54.14:626,54,0	1/1:1,24:25:63.19:755,63,0	1/1:2,41:43:99:1223,102,0	0/0:23,0:23:69.23:0,69,960	0/0:22,0:22:63.20:0,63,864	0/0:20,0:20:57.19:0,57,795	0/0:19,0:19:51.16:0,51,698	0/0:30,0:30:81.26:0,81,1120	1/1:0,31:31:87.27:1043,87,0	0/0:15,0:15:45.15:0,45,630
chr10	107703357	.	A	AACACACACACACACAC	669.99	PASS	AB=0.894;AC=13;AF=0.232;AN=56;BaseQRankSum=2.578;DP=455;FS=15.305;HRun=0;HaplotypeScore=184.9989;InbreedingCoeff=0.5588;MQ=63.26;MQ0=18;MQRankSum=-3.562;QD=6.91;ReadPosRankSum=-4.482;VQSLOD=0.4465;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:31.36:0,31,1084	0/0:7,0:7:8.61:0,9,341	0/0:23,0:10:6.02:0,6,180	0/0:30,0:11:1.70:0,2,35	0/0:11,0:11:30.10:0,30,1132	0/0:22,0:22:11.67:0,12,774	0/0:21,0:20:35.76:0,36,941	1/1:14,0:14:11.99:304,12,0	0/0:17,0:17:22.69:0,23,911	0/0:12,0:12:24.35:0,24,573	0/0:6,0:6:18.06:0,18,717	1/1:10,0:10:2.99:24,3,0	0/0:13,0:13:31.87:0,32,1039	0/0:18,0:18:30.99:0,31,1041	0/0:21,0:20:33.01:0,33,1219	0/0:17,0:17:30.03:0,30,1056	0/0:38,0:38:81.17:0,81,2698	0/1:13,0:13:20.62:21,0,1093	1/1:13,0:13:9.03:400,9,0	1/1:6,0:6:0.94:2,1,0	1/1:15,0:13:3.01:55,3,0	0/0:8,0:8:12.04:0,12,498	0/0:6,0:7:8.85:0,9,282	0/0:38,0:36:53.07:0,53,1749	0/0:7,0:7:12.51:0,13,412	0/0:17,0:16:35.97:0,36,1012	0/1:8,3:13:0:0,0,0	0/1:10,0:9:1.92:2,0,737
chr10	107703611	.	T	TA	1786.06	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.264;DP=483;FS=5.300;HRun=0;HaplotypeScore=64.7963;InbreedingCoeff=0.9717;MQ=57.62;MQ0=10;MQRankSum=-3.441;QD=18.80;ReadPosRankSum=0.178;VQSLOD=5.5925;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.23:0,69,959	0/0:6,0:6:16.31:0,16,84	0/0:28,0:11:27.05:0,27,345	0/0:17,0:7:15.48:0,15,188	0/0:19,0:19:57.19:0,57,796	0/0:22,0:22:63.20:0,63,856	0/0:15,0:15:45.09:0,45,589	1/1:16,3:18:46.62:439,47,0	0/0:12,0:12:33.11:0,33,456	0/0:25,0:25:72.23:0,72,979	0/0:21,0:21:63.20:0,63,846	1/1:12,2:12:23.64:227,24,0	0/0:18,0:18:54.15:0,54,734	0/0:16,0:16:48.14:0,48,638	0/0:11,0:11:33.11:0,33,461	0/0:23,0:23:69.21:0,69,934	0/0:34,0:34:99:0,99,1328	0/0:21,0:21:60.20:0,60,836	1/1:18,5:21:42.03:452,42,0	1/1:12,3:14:36.07:337,36,0	1/1:9,0:8:20.86:164,21,0	0/0:2,0:2:6.02:0,6,84	0/0:15,0:15:45.13:0,45,605	0/0:16,0:16:42.12:0,42,551	0/0:16,0:16:48.16:0,48,671	0/0:19,0:19:57.18:0,57,769	1/1:15,0:14:38.99:355,39,0	0/0:9,0:9:24.08:0,24,336
chr10	107703619	.	CCA	C	1692.78	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.192;DP=509;FS=1.584;HRun=0;HaplotypeScore=79.6067;InbreedingCoeff=0.9479;MQ=58.06;MQ0=8;MQRankSum=-4.235;QD=18.01;ReadPosRankSum=-0.753;VQSLOD=3.5354;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:55.27:0,55,1160	0/0:5,0:5:15.05:0,15,243	0/0:30,0:15:26.66:0,27,410	0/0:27,0:8:14.84:0,15,194	0/0:19,0:19:48.16:0,48,785	0/0:21,1:22:26.01:0,26,940	0/0:19,0:19:48.16:0,48,774	1/1:20,0:19:44.34:385,44,0	0/0:12,0:12:36.12:0,36,587	0/0:24,0:24:69.24:0,69,1116	0/0:20,0:20:60.19:0,60,957	1/1:13,1:12:30:295,30,0	0/0:17,1:18:10.96:0,11,678	0/0:18,0:18:10.96:0,11,640	0/0:9,0:9:24.08:0,24,394	0/0:26,0:26:59.75:0,60,1075	0/0:35,0:35:78.27:0,78,1272	0/0:23,0:23:51.17:0,51,827	1/1:20,1:19:37:369,37,0	1/1:15,0:13:33.02:315,33,0	1/1:10,1:10:20.58:163,21,0	0/0:2,0:2:6.02:0,6,98	0/0:20,0:20:48.15:0,48,761	0/0:15,0:16:33.11:0,33,538	0/0:18,1:19:10.96:0,11,674	0/0:16,0:16:48.15:0,48,763	1/1:12,1:13:38.98:353,39,0	0/0:10,0:10:30.10:0,30,479
chr10	107703620	.	CA	C	2505.64	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.507;DP=518;FS=2.136;HRun=1;HaplotypeScore=70.0878;InbreedingCoeff=0.9844;MQ=57.78;MQ0=9;MQRankSum=-5.136;QD=26.38;ReadPosRankSum=-0.695;VQSLOD=3.3444;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.17:0,75,1157	0/0:6,0:6:18.05:0,18,265	0/0:32,0:15:36.40:0,36,519	0/0:28,0:8:21.53:0,22,267	0/0:20,0:20:57.19:0,57,871	0/0:23,0:23:66.08:0,66,1001	0/0:19,0:19:54.15:0,54,786	1/1:3,17:19:56.02:613,56,0	0/0:12,0:12:36.12:0,36,557	0/0:24,0:24:72.24:0,72,1138	0/0:20,0:20:60.20:0,60,958	1/1:3,10:12:32.50:349,33,0	0/0:17,0:17:48.11:0,48,752	0/0:18,1:19:41.15:0,41,715	0/0:9,0:9:27.09:0,27,420	0/0:26,0:26:77.74:0,78,1165	0/0:35,0:35:96.32:0,96,1445	0/0:23,0:23:60.18:0,60,891	1/1:8,13:19:44.76:506,45,0	1/1:4,11:13:37.97:442,38,0	1/1:4,9:12:20.09:253,20,0	0/0:3,0:3:9.02:0,9,121	0/0:20,0:20:57.17:0,57,846	0/0:16,0:16:42.14:0,42,636	0/0:19,0:19:51.10:0,51,763	0/0:16,0:16:48.16:0,48,765	1/1:1,12:13:39.13:530,39,0	0/0:10,0:10:30.10:0,30,476
chr10	107703764	.	AACTACCACTGGGTCTCTTTCTCC	A	1533.71	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.319;DP=596;FS=5.251;HRun=0;HaplotypeScore=341.8343;InbreedingCoeff=0.8654;MQ=85.75;MQ0=0;MQRankSum=-3.334;QD=17.83;ReadPosRankSum=1.112;VQSLOD=1.3928;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,108,9632	0/0:14,0:14:36.12:0,36,3272	0/0:27,0:27:33.03:0,33,1990	0/0:34,0:34:57.19:0,57,2824	0/0:21,0:21:42.14:0,42,4033	0/0:22,0:22:54.19:0,54,5136	0/0:29,0:29:60.21:0,60,5533	1/1:22,1:23:3.01:75,3,0	0/0:17,0:17:42.14:0,42,3863	0/0:22,0:21:36.12:0,36,3217	0/0:12,0:12:24.08:0,24,1731	0/0:21,0:21:54.19:0,54,4981	0/0:17,0:17:45.15:0,45,4374	0/0:16,0:16:39.12:0,39,2990	0/0:16,0:16:33.11:0,33,3228	0/0:32,0:32:87.30:0,87,8344	0/0:30,0:30:72.25:0,72,5991	0/0:29,0:29:72.20:0,72,5892	1/1:17,1:18:6.01:207,6,0	1/1:6,4:10:15.04:558,15,0	1/1:23,0:23:1.25:68,1,0	0/0:11,0:11:27.08:0,27,2443	0/0:15,0:15:36.12:0,36,3687	0/0:27,0:26:69.24:0,69,6173	0/0:18,0:18:45.15:0,45,4567	0/0:22,0:22:48.16:0,48,4538	1/1:8,4:11:18.03:774,18,0	0/0:14,0:14:39.13:0,39,4117
chr10	107704590	.	A	ACTTC	1893.09	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.910;DP=741;FS=2.516;HRun=0;HaplotypeScore=119.9335;InbreedingCoeff=0.9990;MQ=85.89;MQ0=0;MQRankSum=-4.402;QD=55.68;ReadPosRankSum=0.181;VQSLOD=4.7162;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,129,2372	0/0:12,0:12:33.06:0,33,540	0/0:36,0:36:80.43:0,80,1319	0/0:24,0:24:55.21:0,55,1006	0/0:13,0:13:36.12:0,36,669	0/0:15,0:15:39.13:0,39,728	0/0:27,0:27:75.24:0,75,1366	0/0:30,0:30:78.24:0,78,1317	0/0:25,0:25:75.24:0,75,1362	0/0:20,0:20:57.20:0,57,1061	0/0:14,0:14:39.13:0,39,728	1/1:5,29:33:78.27:1988,78,0	0/0:26,0:26:72.25:0,72,1344	0/0:28,0:28:81.28:0,81,1500	0/0:28,0:28:81.27:0,81,1479	0/0:27,0:27:78.27:0,78,1443	0/0:33,0:33:93.32:0,93,1702	0/0:27,0:27:72.23:0,72,1291	0/0:34,0:34:96.32:0,96,1759	0/0:26,0:26:72.23:0,72,1312	0/0:45,0:45:99:0,123,2230	0/0:20,0:20:51.17:0,51,952	0/0:19,0:18:51.17:0,51,952	0/0:38,0:38:99:0,114,2052	0/0:29,0:29:81.28:0,81,1512	0/0:32,0:32:93.32:0,93,1722	0/0:21,0:21:63.20:0,63,1137	0/0:10,0:10:30.10:0,30,560
chr10	107706467	.	C	CT	850.55	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.295;DP=507;FS=2.260;HRun=7;HaplotypeScore=79.9399;InbreedingCoeff=0.9092;MQ=71.08;MQ0=5;MQRankSum=-1.352;QD=7.80;ReadPosRankSum=-1.448;VQSLOD=0.6324;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:48.04:0,48,457	1/1:4,0:4:3.63:10,4,0	0/0:43,0:23:12.67:0,13,264	0/0:45,1:23:4.78:0,5,133	0/0:18,0:18:42.06:0,42,405	0/0:19,0:19:42.05:0,42,400	0/0:12,0:12:27.02:0,27,255	1/1:31,1:29:47.12:284,47,0	0/0:6,0:6:12:0,12,111	0/0:19,0:19:41.99:0,42,394	0/0:11,0:11:18.01:0,18,174	1/1:0,11:11:30.09:362,30,0	0/0:10,0:10:24.02:0,24,226	0/0:9,0:9:14.97:0,15,134	0/0:14,0:14:30.02:0,30,280	0/0:15,0:15:36.04:0,36,343	0/0:31,0:31:66.01:0,66,625	0/0:27,0:27:63.07:0,63,602	1/1:22,0:22:34.13:247,34,0	1/1:18,0:18:23.62:67,24,0	1/1:3,0:3:5.45:15,5,0	0/0:11,0:11:27.01:0,27,250	0/0:11,0:11:30.05:0,30,289	0/0:12,0:12:24.03:0,24,232	0/0:15,0:15:36.04:0,36,343	0/0:15,0:15:42.07:0,42,405	1/1:19,0:19:18.17:50,18,0	0/0:26,0:26:56.55:0,57,514
chr10	107706474	.	TG	T	2667.73	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=4.978;DP=478;FS=3.679;HRun=1;HaplotypeScore=64.9017;InbreedingCoeff=0.8877;MQ=71.38;MQ0=3;MQRankSum=1.142;QD=26.95;ReadPosRankSum=-1.668;VQSLOD=3.0554;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:54.13:0,54,747	1/1:0,6:6:8.99:103,9,0	0/0:38,1:24:37.97:0,38,572	0/0:35,0:25:33.64:0,34,341	0/0:18,0:18:51.11:0,51,666	0/0:19,0:19:45.15:0,45,654	0/0:14,0:14:36.08:0,36,471	1/1:1,29:27:81.17:995,81,0	0/0:8,0:8:15.03:0,15,200	0/0:17,0:17:48.15:0,48,671	0/1:10,0:10:6.24:6,0,242	0/0:11,0:11:27.45:0,27,120	0/0:11,0:11:30.07:0,30,400	0/0:6,0:6:15.05:0,15,218	0/0:15,0:15:36.09:0,36,489	0/0:14,0:14:39.11:0,39,535	0/0:31,0:31:72.16:0,72,953	0/0:27,0:27:66.17:0,66,913	1/1:0,17:17:51.08:618,51,0	1/1:0,18:18:45.08:586,45,0	1/1:0,5:5:9.03:125,9,0	0/0:10,0:10:30.10:0,30,420	0/0:13,0:13:39.08:0,39,490	0/0:12,0:12:27.07:0,27,375	0/0:17,0:17:45.10:0,45,602	0/0:17,0:17:51.14:0,51,683	1/1:0,13:13:30.10:418,30,0	0/0:21,0:21:40.05:0,40,682
chr10	107706716	.	GTACATATACATCTATATTGTACATATATAT	G	1850.55	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.194;DP=495;FS=2.752;HRun=0;HaplotypeScore=355.5419;InbreedingCoeff=0.9109;MQ=72.97;MQ0=0;MQRankSum=-3.917;QD=115.66;ReadPosRankSum=1.710;VQSLOD=2.2976;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.25:0,78,8455	0/0:4,0:4:12.04:0,12,1349	0/0:9,0:9:21.03:0,21,554	0/0:10,0:9:15.51:0,16,454	0/0:24,0:24:66.23:0,66,7025	0/0:12,0:12:30.10:0,30,3644	0/0:16,0:16:36.09:0,36,2938	0/0:24,0:24:60.21:0,60,4230	0/0:14,0:14:39.13:0,39,4141	0/0:33,0:33:93.32:0,93,9477	0/0:18,0:18:45.15:0,45,5234	1/1:9,7:16:30.10:1945,30,0	0/0:15,0:15:39.13:0,39,4536	0/0:14,0:14:39.13:0,39,4764	0/0:17,0:17:48.16:0,48,4933	0/0:22,0:22:51.17:0,51,4375	0/0:27,0:27:63.22:0,63,7118	0/0:26,0:26:75.26:0,75,8264	0/0:19,0:19:36.12:0,36,3371	0/0:15,0:15:39.13:0,39,3726	0/0:5,0:5:15.05:0,15,1669	0/0:6,0:6:12.04:0,12,1302	0/0:16,0:16:45.15:0,45,4987	0/0:11,0:11:30.10:0,30,2841	0/0:22,0:22:63.22:0,63,6962	0/0:26,0:26:75.25:0,75,8098	0/0:19,0:19:51.16:0,51,5244	0/0:26,0:26:66.23:0,66,7906
chr10	107706796	.	TA	T	824.54	PASS	AB=0.925;AC=14;AF=0.250;AN=56;BaseQRankSum=6.154;DP=541;FS=1.540;HRun=15;HaplotypeScore=69.4541;InbreedingCoeff=0.6443;MQ=72.38;MQ0=0;MQRankSum=0.005;QD=5.12;ReadPosRankSum=2.020;VQSLOD=2.3534;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:36:52.71:0,53,433	0/0:7,0:7:11.87:0,12,94	0/0:25,0:16:5.71:0,6,136	0/0:6,0:5:5.27:0,5,24	0/0:24,1:30:3.82:0,4,266	0/0:17,2:19:19.38:0,19,265	0/0:13,1:15:5:0,5,147	1/1:11,24:35:8.82:301,9,0	0/0:15,0:15:18.74:0,19,201	0/0:19,0:21:35:0,35,294	0/0:16,0:16:23.84:0,24,198	1/1:3,0:16:22.34:65,22,0	0/0:14,0:14:19.77:0,20,152	0/0:13,0:13:29.96:0,30,253	0/1:13,1:15:5.69:6,0,184	0/0:15,0:15:32.67:0,33,261	0/0:23,0:25:62.40:0,62,493	0/0:24,0:24:36.41:0,36,306	1/1:5,10:15:7.46:126,7,0	1/1:7,14:21:3.88:127,4,0	1/1:1,11:12:29.54:192,30,0	0/0:16,0:16:32.95:0,33,274	0/0:20,0:20:26.68:0,27,208	0/0:17,1:21:19.42:0,19,266	0/1:19,2:21:5.68:6,0,188	0/0:23,2:25:1.06:0,1,230	1/1:11,14:25:8.04:170,8,0	0/0:16,0:17:26.84:0,27,225
chr10	107707323	.	C	CG	668.31	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.374;DP=453;FS=0.000;HRun=1;HaplotypeScore=49.3909;InbreedingCoeff=0.9202;MQ=79.89;MQ0=0;MQRankSum=-1.874;QD=37.13;ReadPosRankSum=1.533;VQSLOD=3.7731;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.12:0,81,983	0/0:7,0:7:18.06:0,18,233	0/0:8,0:8:21.07:0,21,267	0/0:15,0:15:44.33:0,44,513	0/0:7,0:7:18.06:0,18,234	0/0:9,0:9:27.09:0,27,350	0/0:21,0:21:63.20:0,63,817	0/0:17,0:17:51.17:0,51,662	0/0:22,0:22:66.19:0,66,839	0/0:12,0:12:33.11:0,33,427	0/0:12,0:12:24.08:0,24,311	1/1:0,18:18:51.17:763,51,0	0/0:8,0:8:24.08:0,24,311	0/0:20,0:20:54.18:0,54,700	0/0:16,0:16:45.15:0,45,584	0/0:12,0:12:36.11:0,36,454	0/0:23,0:23:69.22:0,69,895	0/0:26,0:26:78.25:0,78,1012	0/0:16,0:16:42.13:0,42,536	0/0:15,0:15:27.04:0,27,329	0/0:32,0:32:87.24:0,87,1109	0/0:13,0:13:36.12:0,36,467	0/0:10,0:10:26.96:0,27,293	0/0:27,0:27:78:0,78,963	0/0:12,0:12:33.11:0,33,428	0/0:29,0:29:87.24:0,87,1106	0/0:13,0:13:36.07:0,36,423	0/0:3,0:3:8.99:0,9,98
chr10	107707661	.	T	TAA	7427.61	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-5.789;DP=602;FS=2.544;HRun=1;HaplotypeScore=139.5320;InbreedingCoeff=0.9968;MQ=91.47;MQ0=0;MQRankSum=-1.941;QD=47.61;ReadPosRankSum=-3.878;VQSLOD=3.7251;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.19:0,57,871	1/1:0,11:11:30.10:577,30,0	0/0:39,0:39:99:0,111,1598	0/0:29,0:29:59.62:0,60,823	0/0:11,0:11:18.06:0,18,275	0/0:25,0:25:56.69:0,57,975	0/0:18,0:18:44.69:0,45,679	1/1:0,31:32:96.27:1651,96,0	0/0:21,0:21:60.20:0,60,899	0/0:20,0:20:57.66:0,58,873	0/0:13,0:13:30.08:0,30,437	1/1:6,25:31:76.46:1341,76,0	0/0:22,0:22:36.87:0,37,638	0/0:18,0:18:44.21:0,44,619	0/0:26,0:26:69.22:0,69,1034	0/0:21,0:21:41.54:0,42,716	0/0:25,0:25:60.19:0,60,895	0/0:19,0:19:54.13:0,54,792	1/1:2,21:26:75.20:1295,75,0	1/1:2,15:17:39.10:695,39,0	1/1:0,23:23:63.17:1158,63,0	0/0:24,0:24:63.21:0,63,961	0/0:12,0:12:21.07:0,21,320	0/0:24,0:23:63.18:0,63,919	0/0:18,0:18:47.93:0,48,732	0/0:32,0:32:93.29:0,93,1378	1/1:3,13:16:36.17:710,36,0	0/0:7,0:7:21.07:0,21,321
chr10	107709717	.	T	TCAAA	1453.99	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.792;DP=848;FS=0.000;HRun=0;HaplotypeScore=133.7130;InbreedingCoeff=0.9952;MQ=61.43;MQ0=4;MQRankSum=-0.826;QD=38.26;ReadPosRankSum=1.712;VQSLOD=3.6113;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,114,1890	0/0:9,0:9:21.07:0,21,348	0/0:32,0:23:35.76:0,36,593	0/0:33,0:29:57.05:0,57,873	0/0:26,0:26:60.20:0,60,988	0/0:24,0:24:51.17:0,51,840	0/0:35,0:35:87.27:0,87,1385	0/0:38,0:38:69.22:0,69,1097	0/0:31,0:31:81.26:0,81,1300	0/0:29,0:29:75.26:0,75,1235	0/0:16,0:16:30.10:0,30,497	1/1:15,23:38:63.22:1549,63,0	0/0:30,0:30:81.28:0,81,1334	0/0:38,0:38:93.30:0,93,1508	0/0:40,0:40:99:0,105,1663	0/0:22,0:22:51.17:0,51,846	0/0:37,0:37:99:0,99,1614	0/0:22,0:22:42.14:0,42,687	0/0:26,0:24:51.15:0,51,799	0/0:39,0:39:87.30:0,87,1443	0/0:47,0:48:99:0,114,1842	0/0:33,0:33:75.22:0,75,1206	0/0:21,0:21:51.17:0,51,845	0/0:35,0:35:89.54:0,90,1491	0/0:28,0:28:60.17:0,60,931	0/0:30,0:30:72.25:0,72,1185	0/0:27,0:27:63.16:0,63,991	0/0:13,0:13:36.12:0,36,577
chr10	107716519	.	CTCTCTT	C	555.82	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=4.228;DP=479;FS=8.115;HRun=0;HaplotypeScore=113.9269;InbreedingCoeff=0.4042;MQ=59.76;MQ0=15;MQRankSum=-1.285;QD=7.41;ReadPosRankSum=-3.161;VQSLOD=0.7078;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:53.90:0,54,740	0/0:5,0:5:8.18:0,8,35	0/1:17,0:4:16.71:19,0,17	0/1:30,0:12:24.69:25,0,34	0/0:12,0:11:13.94:0,14,142	0/0:14,0:13:32.93:0,33,486	0/0:32,0:32:79.61:0,80,996	0/0:23,0:22:40.55:0,41,340	0/0:19,0:19:36.43:0,36,802	0/0:23,0:21:42.30:0,42,634	0/0:15,0:15:37.79:0,38,698	1/1:23,4:26:41.34:627,41,0	0/0:12,0:12:16.58:0,17,195	0/0:13,0:13:12.15:0,12,423	0/0:12,0:12:27.05:0,27,539	0/0:15,0:14:41.77:0,42,929	0/0:22,0:22:28.07:0,28,891	0/0:27,0:26:62.37:0,62,1059	0/0:12,0:12:30.31:0,30,357	0/0:9,0:8:9.74:0,10,261	0/0:22,0:19:10.96:0,11,381	0/0:10,0:10:17.14:0,17,402	0/0:8,0:8:18.01:0,18,369	0/0:24,0:24:47.11:0,47,814	0/0:13,0:12:17.29:0,17,336	0/0:15,0:15:41.81:0,42,495	0/0:16,0:16:42.08:0,42,822	0/0:5,0:5:14.92:0,15,341
chr10	107716541	.	TC	T	1252.07	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.643;DP=466;FS=0.000;HRun=6;HaplotypeScore=70.9326;InbreedingCoeff=0.9254;MQ=78.65;MQ0=5;MQRankSum=-0.903;QD=12.28;ReadPosRankSum=1.497;VQSLOD=2.0004;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.09:0,75,1050	1/1:3,0:3:0.47:1,0,0	0/0:24,0:11:21.36:0,21,262	0/0:43,0:24:41.73:0,42,476	0/0:3,0:3:9.03:0,9,128	0/0:15,0:15:45.14:0,45,608	0/0:39,0:39:99:0,111,1565	1/1:15,3:18:43.49:347,43,0	0/0:17,0:17:49.70:0,50,667	0/0:11,0:11:27.09:0,27,383	0/0:9,0:9:24.08:0,24,346	1/1:23,0:23:27.81:168,28,0	0/0:14,0:14:34.93:0,35,468	0/0:16,0:16:43.03:0,43,605	0/0:13,0:13:36.12:0,36,502	0/0:15,0:15:43.01:0,43,583	0/0:29,0:29:70.10:0,70,961	0/0:27,0:27:81.27:0,81,1143	1/1:12,0:12:7.75:187,8,0	1/1:4,1:6:14.14:81,14,0	1/1:26,1:26:61.88:436,62,0	0/0:4,0:4:12.04:0,12,173	0/0:6,0:6:18.06:0,18,258	0/0:24,0:24:69.19:0,69,933	0/0:9,0:9:24.05:0,24,309	0/0:14,0:14:42.11:0,42,572	1/1:9,2:12:31.85:213,32,0	0/0:5,0:5:15.05:0,15,214
chr10	107716543	.	C	CA	2515.06	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.900;DP=475;FS=2.324;HRun=0;HaplotypeScore=67.7825;InbreedingCoeff=0.9121;MQ=78.55;MQ0=5;MQRankSum=0.335;QD=30.67;ReadPosRankSum=1.069;VQSLOD=3.6040;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.18:0,78,1044	0/0:3,0:3:2.97:0,3,20	0/0:24,0:11:21.40:0,21,240	0/0:43,0:24:35.62:0,36,440	0/0:3,0:3:9.03:0,9,120	0/0:16,0:16:48.15:0,48,653	0/0:38,0:38:99:0,111,1535	1/1:3,14:17:44.88:617,45,0	0/0:18,0:18:52.69:0,53,680	0/0:11,0:11:27.09:0,27,378	0/0:9,0:9:24.08:0,24,336	0/0:23,0:23:57.16:0,57,420	0/0:14,0:14:36.11:0,36,480	0/0:16,0:16:45.14:0,45,612	0/0:15,0:15:39.11:0,39,516	0/0:15,0:15:43.01:0,43,567	0/0:28,0:28:72.20:0,72,970	0/0:27,0:27:81.27:0,81,1127	1/1:2,11:14:11.22:463,11,0	1/1:5,5:9:14.92:213,15,0	1/1:7,22:29:63.02:987,63,0	0/0:4,0:4:12.04:0,12,168	0/0:6,0:6:18.06:0,18,252	0/0:25,0:25:72.63:0,73,927	0/0:8,0:8:24.08:0,24,334	0/0:15,0:15:45.14:0,45,612	1/1:4,7:12:10.81:401,11,0	0/0:5,0:5:15.05:0,15,210
chr10	107716544	.	CA	C	1834.35	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.522;DP=487;FS=5.308;HRun=1;HaplotypeScore=72.4629;InbreedingCoeff=0.9427;MQ=78.17;MQ0=5;MQRankSum=-0.445;QD=16.68;ReadPosRankSum=-1.708;VQSLOD=3.2031;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.19:0,78,1058	1/1:3,0:3:2.98:21,3,0	0/0:22,1:11:21.11:0,21,254	0/0:43,0:24:42.08:0,42,473	0/0:6,0:6:8.99:0,9,94	0/0:16,0:16:47.72:0,48,614	0/0:39,0:39:99:0,111,1531	1/1:16,0:16:40.07:256,40,0	0/0:19,0:19:35.04:0,35,683	0/0:11,0:11:27.09:0,27,393	0/0:9,0:9:27.08:0,27,371	1/1:11,12:23:62.27:639,62,0	0/0:14,0:14:18.97:0,19,435	0/0:17,0:17:24.23:0,24,613	0/0:15,0:15:40.66:0,41,531	0/0:15,0:15:19.18:0,19,483	0/0:27,0:27:53.21:0,53,957	0/0:28,0:28:81.20:0,81,1140	1/1:14,0:14:35.20:237,35,0	1/1:11,0:10:23.64:161,24,0	1/1:31,0:31:73.74:492,74,0	0/0:5,0:5:12.04:0,12,175	0/0:7,0:7:18.04:0,18,223	0/0:25,0:25:69.18:0,69,932	0/0:9,0:9:24.05:0,24,316	0/0:16,0:16:44.92:0,45,565	1/1:12,0:12:35.21:220,35,0	0/0:5,0:5:15.05:0,15,219
chr10	107717053	.	G	GA	1117.18	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.510;DP=552;FS=1.428;HRun=6;HaplotypeScore=64.4922;InbreedingCoeff=0.9337;MQ=82.21;MQ0=0;MQRankSum=-1.890;QD=32.86;ReadPosRankSum=0.842;VQSLOD=3.7668;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,141,1410	1/1:0,4:4:9.03:113,9,0	0/0:14,0:14:30.80:0,31,307	0/0:19,0:19:42.07:0,42,418	0/0:13,0:13:24.04:0,24,244	0/0:20,0:20:48.11:0,48,489	0/0:25,0:25:60.12:0,60,606	0/0:28,0:28:72.06:0,72,696	0/0:22,0:22:60.10:0,60,597	0/0:15,0:15:33.07:0,33,336	0/0:3,0:3:9.02:0,9,92	1/1:0,30:30:90.25:1118,90,0	0/0:18,0:18:36.05:0,36,353	0/0:27,0:27:72.15:0,72,727	0/0:17,0:17:42.09:0,42,428	0/0:17,0:17:51.12:0,51,520	0/0:18,0:18:42.05:0,42,413	0/0:19,0:19:54.10:0,54,542	0/0:23,0:23:57.10:0,57,569	0/0:11,0:11:33.08:0,33,336	0/0:27,0:27:63.12:0,63,635	0/0:14,0:14:39.09:0,39,397	0/0:7,0:7:17.91:0,18,183	0/0:40,0:40:99:0,105,1055	0/0:13,0:13:27.03:0,27,267	0/0:27,0:27:74.84:0,75,745	0/0:19,0:19:54.12:0,54,550	0/0:10,0:10:30.07:0,30,305
chr10	107717534	.	TTC	T	1601.69	PASS	AB=0.947;AC=11;AF=0.196;AN=56;BaseQRankSum=2.481;DP=524;FS=42.240;HRun=0;HaplotypeScore=77.5094;InbreedingCoeff=0.8845;MQ=74.43;MQ0=5;MQRankSum=0.457;QD=14.83;ReadPosRankSum=-3.014;VQSLOD=1.0878;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:74.80:0,75,995	0/0:7,0:7:10.82:0,11,45	0/0:41,0:24:30.81:0,31,341	0/0:31,0:13:25.75:0,26,225	0/0:25,0:24:68.66:0,69,941	0/0:10,0:10:24.43:0,24,317	0/0:30,0:30:86.94:0,87,1119	1/1:7,15:22:47.72:438,48,0	0/0:4,0:4:12.03:0,12,170	0/0:20,0:20:38.95:0,39,469	0/0:14,0:14:35.82:0,36,473	0/1:17,1:17:2.72:81,0,3	0/0:8,0:8:21.05:0,21,292	0/0:12,0:12:27:0,27,385	0/0:16,0:16:48.12:0,48,680	0/0:10,0:10:23.98:0,24,332	0/0:29,0:29:71.70:0,72,888	0/0:27,0:27:68.65:0,69,834	1/1:24,7:31:62.65:631,63,0	1/1:4,9:13:35.83:364,36,0	1/1:4,12:16:17.86:191,18,0	0/0:12,0:11:24.05:0,24,332	0/0:15,0:15:26.91:0,27,323	0/0:24,0:24:66.20:0,66,1028	0/0:20,0:20:50.87:0,51,616	0/0:22,0:22:54.12:0,54,687	1/1:3,5:8:5.76:69,6,0	0/0:12,0:12:35.94:0,36,349
chr10	107717541	.	TC	T	1294.62	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.402;DP=532;FS=41.045;HRun=1;HaplotypeScore=74.3321;InbreedingCoeff=0.8771;MQ=68.19;MQ0=6;MQRankSum=0.261;QD=11.88;ReadPosRankSum=-2.132;VQSLOD=-0.3742;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:68.23:0,68,736	0/0:8,0:8:14.38:0,14,82	0/0:41,0:20:41.47:0,41,347	0/0:31,0:12:18.57:0,19,223	0/0:27,0:25:74.96:0,75,795	0/0:13,0:12:28.18:0,28,260	0/0:31,0:31:85.68:0,86,892	1/1:23,3:26:39.29:399,39,0	0/0:6,0:6:14.94:0,15,154	0/0:21,0:20:40.36:0,40,397	0/0:12,0:12:35.81:0,36,380	1/1:2,14:15:10.91:175,11,0	0/0:7,0:7:21:0,21,223	0/0:12,0:12:22.60:0,23,269	0/0:18,0:18:47.30:0,47,528	0/0:9,0:9:22.27:0,22,246	0/0:29,0:29:61.78:0,62,651	0/0:26,1:27:64.84:0,65,656	1/1:27,2:29:2.66:434,3,0	1/1:11,2:13:35.75:271,36,0	1/1:14,2:16:2.57:136,3,0	0/0:11,0:10:23.99:0,24,265	0/0:12,0:12:25.41:0,25,242	0/0:27,0:27:69.01:0,69,798	0/0:21,0:21:40.22:0,40,473	0/0:20,0:20:53.91:0,54,563	1/1:9,0:9:5.91:44,6,0	0/0:13,0:13:35.89:0,36,320
chr10	107718118	.	T	TC	2346.93	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-1.541;DP=446;FS=10.985;HRun=5;HaplotypeScore=58.8846;InbreedingCoeff=0.8824;MQ=72.73;MQ0=0;MQRankSum=-0.840;QD=17.65;ReadPosRankSum=-4.257;VQSLOD=1.4728;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.21:0,84,901	1/1:3,6:9:21.06:260,21,0	0/0:14,0:13:17.60:0,18,241	0/1:17,0:15:28.17:28,0,163	0/0:14,0:14:30.07:0,30,322	0/0:10,0:10:21.05:0,21,226	0/0:23,0:23:48.57:0,49,507	1/1:7,17:24:51.16:655,51,0	0/0:16,0:16:38.88:0,39,399	0/0:13,0:13:33.08:0,33,355	0/0:14,0:14:27.06:0,27,290	1/1:4,12:16:9.03:114,9,0	0/0:18,0:18:39.09:0,39,419	0/0:20,0:20:42.08:0,42,441	0/0:21,0:21:42.09:0,42,450	0/0:19,0:19:42.09:0,42,448	0/0:14,0:14:33.07:0,33,346	0/0:14,0:14:20.61:0,21,252	1/1:2,10:12:30.08:380,30,0	1/1:2,9:11:15.01:178,15,0	1/1:2,28:31:57.18:740,57,0	0/0:15,0:15:30.07:0,30,315	0/0:15,0:15:39.10:0,39,418	0/0:19,0:19:54.14:0,54,579	0/0:12,0:12:27.04:0,27,279	0/0:5,0:5:12.03:0,12,129	1/1:2,11:13:14.56:188,15,0	0/0:9,0:9:24.04:0,24,246
chr10	107718953	.	T	TTA	7746.85	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-13.675;DP=718;FS=4.065;HRun=0;HaplotypeScore=79.5924;InbreedingCoeff=0.9894;MQ=91.32;MQ0=2;MQRankSum=-1.018;QD=48.42;ReadPosRankSum=-2.391;VQSLOD=4.9553;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,160,2313	1/1:1,15:15:42.14:786,42,0	0/0:33,0:33:90.26:0,90,1244	0/0:26,0:26:60.17:0,60,849	0/0:27,0:27:81.27:0,81,1192	0/0:23,0:23:69.23:0,69,1016	0/0:41,0:41:99:0,117,1722	1/1:5,31:36:96.31:1738,96,0	0/0:22,0:22:66.22:0,66,972	0/0:28,0:28:84.26:0,84,1215	0/0:17,0:17:51.17:0,51,751	1/1:0,17:17:45.15:843,45,0	0/0:29,0:29:87.29:0,87,1278	0/0:26,0:26:75.24:0,75,1084	0/0:23,0:23:69.22:0,69,996	0/0:17,0:17:51.14:0,51,711	0/0:35,0:35:99:0,105,1506	0/0:25,0:25:75.23:0,75,1083	1/1:3,11:14:36.12:673,36,0	1/1:0,14:14:42.14:787,42,0	1/1:4,29:33:75.26:1405,75,0	0/0:24,0:24:72.23:0,72,1041	0/0:21,0:21:54.17:0,54,777	0/0:34,0:34:99:0,99,1439	0/0:25,0:25:75.24:0,75,1085	0/0:26,0:26:75.25:0,75,1105	1/1:1,29:29:81.28:1515,81,0	0/0:3,0:3:9.03:0,9,133
chr10	107721935	.	G	GAAAC	5199.05	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-9.293;DP=578;FS=0.958;HRun=0;HaplotypeScore=91.2851;InbreedingCoeff=0.9960;MQ=63.89;MQ0=0;MQRankSum=-4.071;QD=48.14;ReadPosRankSum=-3.984;VQSLOD=4.4947;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.27:0,78,1306	0/0:8,0:8:18.06:0,18,301	0/0:20,0:17:30.09:0,30,468	0/0:15,0:15:24.03:0,24,343	0/0:27,0:27:69.24:0,69,1151	0/0:22,0:22:48.16:0,48,806	0/0:20,0:20:36.06:0,36,498	1/1:9,11:21:46.01:945,46,0	0/0:14,0:14:27.09:0,27,453	0/0:20,0:20:42.13:0,42,680	0/0:16,0:16:36.12:0,36,603	0/0:17,0:17:39.13:0,39,653	0/0:17,0:17:45.15:0,45,752	0/0:21,0:21:54.13:0,54,836	0/0:13,0:14:39.13:0,39,631	0/0:14,0:14:27.08:0,27,428	0/0:38,0:38:81.24:0,81,1300	0/0:33,0:33:47.86:0,48,1309	1/1:6,11:20:48.13:999,48,0	1/1:7,17:24:57.16:1321,57,0	1/1:7,16:23:39.13:967,39,0	0/0:24,0:24:60.20:0,60,985	0/0:20,0:20:48.16:0,48,804	0/0:28,0:28:57.17:0,57,953	0/0:27,0:27:60.20:0,60,1006	0/0:17,0:17:48.13:0,48,724	1/1:4,15:20:39.13:967,39,0	0/0:8,0:8:21.07:0,21,353
chr10	107723265	.	GA	G	431.37	PASS	AB=0.882;AC=3;AF=0.054;AN=56;BaseQRankSum=6.030;DP=651;FS=0.000;HRun=11;HaplotypeScore=68.6651;InbreedingCoeff=0.5981;MQ=74.25;MQ0=0;MQRankSum=0.174;QD=10.78;ReadPosRankSum=1.398;VQSLOD=2.9958;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,1:43:86.46:0,86,1101	0/0:12,0:13:38.93:0,39,397	0/0:16,0:16:6.06:0,6,71	0/0:16,0:16:18.07:0,18,211	0/1:13,2:15:19.21:19,0,226	0/0:23,0:24:62.99:0,63,654	0/0:29,0:30:19.80:0,20,595	0/0:29,0:28:72.14:0,72,739	0/0:23,1:24:35.48:0,35,572	0/0:27,0:28:62.96:0,63,640	0/0:10,0:10:24.06:0,24,256	1/1:1,24:25:62.91:518,63,0	0/0:28,0:28:50.40:0,50,698	0/0:24,0:25:56.29:0,56,628	0/0:26,1:27:42.76:0,43,643	0/0:24,2:26:47.53:0,48,704	0/0:30,1:31:53.54:0,54,767	0/0:26,0:26:78.01:0,78,804	0/0:20,0:21:51.08:0,51,523	0/0:22,0:22:54.12:0,54,568	0/0:19,0:20:47.95:0,48,488	0/0:23,1:24:41.51:0,42,639	0/0:19,0:20:50.96:0,51,521	0/0:26,0:26:69.12:0,69,705	0/0:21,0:22:56.99:0,57,578	0/0:21,1:23:26.31:0,26,463	0/0:24,0:24:51.60:0,52,545	0/0:13,0:13:36.03:0,36,357
chr10	107723440	.	C	CTGG	7039.69	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-10.271;DP=577;FS=13.012;HRun=0;HaplotypeScore=79.3960;InbreedingCoeff=0.9855;MQ=83.51;MQ0=0;MQRankSum=-3.464;QD=41.41;ReadPosRankSum=-1.178;VQSLOD=5.2516;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,99,1498	1/1:0,5:6:15.05:324,15,0	0/0:24,0:20:44.15:0,44,657	0/0:25,0:22:40.32:0,40,684	0/0:11,0:11:27.09:0,27,422	0/0:11,0:11:24.08:0,24,375	0/0:21,0:21:63.21:0,63,978	1/1:6,18:24:54.17:1114,54,0	0/0:23,0:23:69.20:0,69,1031	0/0:13,0:13:21.06:0,21,289	0/0:4,0:4:12.04:0,12,187	1/1:7,23:31:69.24:1486,69,0	0/0:30,0:30:81.28:0,81,1266	0/0:24,0:24:63.20:0,63,961	0/0:15,0:15:45.14:0,45,681	0/0:16,0:16:45.15:0,45,695	0/0:27,0:27:81.26:0,81,1240	0/0:34,0:33:93.32:0,93,1454	1/1:9,12:20:30.07:605,30,0	1/1:1,6:7:18.02:342,18,0	1/1:9,50:63:99:2326,108,0	0/0:12,0:12:33.11:0,33,513	0/0:14,0:14:39.13:0,39,610	0/0:34,0:34:90.31:0,90,1405	0/0:9,0:9:27.09:0,27,420	0/0:16,0:16:36.12:0,36,562	1/1:3,15:18:38.95:843,39,0	0/0:5,0:5:15.05:0,15,234
chr10	107723623	.	GAGGGTA	G	733.55	PASS	AB=0.992;AC=19;AF=0.339;AN=56;BaseQRankSum=-1.047;DP=241;FS=4.021;HRun=0;HaplotypeScore=71.9439;InbreedingCoeff=-0.0419;MQ=80.22;MQ0=4;MQRankSum=-3.342;QD=4.61;ReadPosRankSum=-3.393;VQSLOD=0.5037;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:1.90:0,2,412	1/1:6,0:6:10.03:157,10,0	0/1:19,0:8:11.37:11,0,136	0/1:31,0:20:5.21:5,0,307	0/0:4,0:4:3.45:0,3,79	0/0:1,0:1:0.47:0,0,1	0/1:8,0:8:14.76:15,0,127	0/1:10,0:9:17.53:18,0,85	0/1:6,0:6:12.96:13,0,197	1/1:5,0:5:6.01:58,6,0	0/0:4,0:4:2.94:0,3,27	1/1:12,5:18:33.70:467,34,0	0/1:9,0:9:36.49:36,0,149	0/0:10,0:10:12.97:0,13,266	0/0:7,0:7:7.31:0,7,158	0/0:5,0:5:6.92:0,7,120	1/1:6,0:6:1.98:23,2,0	0/0:3,0:3:0.89:0,1,3	0/0:4,0:3:1.41:0,1,3	0/1:9,0:9:7.02:7,0,269	0/1:16,0:16:31.46:31,0,97	0/0:7,0:7:15.05:0,15,365	0/0:6,0:6:3.46:0,3,80	0/1:5,0:5:10.64:11,0,148	0/0:7,0:7:9.27:0,9,203	0/1:5,0:5:15.50:15,0,126	0/0:7,0:7:11.99:0,12,157	0/1:4,0:4:18.91:19,0,73
chr10	107723672	.	GAA	G	1576.50	PASS	AB=0.974;AC=12;AF=0.214;AN=56;BaseQRankSum=7.593;DP=305;FS=8.896;HRun=11;HaplotypeScore=51.9761;InbreedingCoeff=0.7296;MQ=76.63;MQ0=1;MQRankSum=1.600;QD=15.31;ReadPosRankSum=-2.154;VQSLOD=0.7683;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:11:27.09:0,27,398	0/0:2,0:5:7.49:0,7,26	0/1:17,1:12:22.99:25,0,23	0/1:18,0:8:8.41:8,0,46	0/0:12,0:12:27.06:0,27,349	0/0:7,0:7:21.07:0,21,323	0/0:12,0:12:30.09:0,30,442	1/1:3,21:24:63.12:655,63,0	0/0:14,0:14:33.11:0,33,507	0/0:13,0:13:39.12:0,39,579	0/0:7,0:7:18.02:0,18,251	0/0:3,0:15:38.87:0,39,171	0/0:12,0:12:36.08:0,36,527	0/0:3,0:3:9.03:0,9,139	0/0:13,0:13:36.11:0,36,534	0/0:11,0:11:33.11:0,33,504	0/0:6,0:6:18.05:0,18,257	0/0:1,0:1:3.01:0,3,46	1/1:4,13:17:33.90:429,34,0	1/1:1,8:9:21.04:223,21,0	1/1:1,8:9:15.03:158,15,0	0/0:10,0:10:27.08:0,27,389	0/0:6,0:7:18.06:0,18,260	0/0:9,0:9:27.09:0,27,416	0/0:7,0:7:12.04:0,12,185	0/0:8,0:8:21.06:0,21,294	1/1:0,8:8:24.06:255,24,0	0/0:18,0:19:55.49:0,55,798
chr10	107724234	.	AGGG	A	604.08	PASS	AB=1.000;AC=9;AF=0.173;AN=52;BaseQRankSum=8.648;DP=524;FS=5.165;HRun=3;HaplotypeScore=77.0269;InbreedingCoeff=0.7753;MQ=47.95;MQ0=21;MQRankSum=-7.326;QD=17.26;ReadPosRankSum=-2.199;VQSLOD=-0.2555;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:78.27:0,78,1783	1/1:3,2:5:10.83:105,11,0	0/0:37,0:7:17.47:0,17,287	0/0:49,0:4:5.84:0,6,148	0/0:14,0:14:39.07:0,39,863	0/0:24,0:24:54.07:0,54,1451	0/0:29,0:29:82.47:0,82,1729	1/1:4,1:4:3.01:55,3,0	0/0:24,0:23:69.22:0,69,1646	0/0:21,1:18:54.14:0,54,1129	0/0:24,0:24:66.07:0,66,1573	./.	0/0:14,0:14:42.12:0,42,957	0/0:21,0:21:63.22:0,63,1526	0/0:11,0:11:30.10:0,30,739	0/0:18,0:17:48.07:0,48,1176	0/0:31,0:30:62.52:0,63,1807	0/0:22,0:17:51.10:0,51,1137	0/1:3,0:2:18.26:18,0,39	1/1:5,6:11:23.54:307,24,0	./.	0/0:12,0:12:33.11:0,33,808	0/0:23,0:22:66.19:0,66,1455	0/0:23,0:23:42.78:0,43,1345	0/0:22,0:22:60.21:0,60,1435	0/0:25,0:22:66.22:0,66,1561	1/1:7,4:9:24.62:269,25,0	0/0:7,0:7:18.06:0,18,443
chr10	107724235	.	GGGAGAA	G	224.75	PASS	AB=0.860;AC=5;AF=0.096;AN=52;BaseQRankSum=6.810;DP=524;FS=0.976;HRun=0;HaplotypeScore=103.8285;InbreedingCoeff=0.2227;MQ=47.81;MQ0=21;MQRankSum=-6.103;QD=7.49;ReadPosRankSum=-1.544;VQSLOD=2.0126;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:78.27:0,78,2599	1/1:3,2:5:5.43:76,5,0	0/0:38,0:6:15.04:0,15,442	0/0:49,0:4:5.88:0,6,173	0/0:14,0:14:39.13:0,39,1160	0/0:24,0:24:54.97:0,55,2104	0/0:29,0:29:55.47:0,55,2144	0/0:6,0:4:2.68:0,3,11	0/0:23,0:22:66.23:0,66,2108	0/0:21,0:17:48.16:0,48,1515	0/0:24,0:24:65.96:0,66,2292	./.	0/0:14,0:14:39.13:0,39,1262	0/0:21,0:21:63.22:0,63,2170	0/0:11,0:11:30.10:0,30,1097	0/0:18,0:17:48.16:0,48,1631	0/0:30,0:29:60.12:0,60,2604	0/0:21,0:17:51.17:0,51,1650	0/1:3,0:2:40.76:41,0,71	0/1:7,4:11:25.10:120,0,25	./.	0/0:13,0:13:36.12:0,36,1216	0/0:24,0:23:57.03:0,57,2063	0/0:24,0:23:34.67:0,35,2035	0/0:22,0:22:63.17:0,63,1970	0/0:25,0:22:66.23:0,66,2317	0/1:9,2:9:43.45:100,0,43	0/0:7,0:7:18.06:0,18,659
chr10	107724257	.	G	GA	405.64	PASS	AB=0.855;AC=8;AF=0.148;AN=54;BaseQRankSum=7.341;DP=574;FS=2.853;HRun=2;HaplotypeScore=81.8525;InbreedingCoeff=0.3329;MQ=44.26;MQ0=51;MQRankSum=-6.891;QD=6.88;ReadPosRankSum=-3.846;VQSLOD=-0.4984;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:28:74.26:0,74,917	0/1:6,3:9:35.31:112,0,35	0/0:29,0:7:17.78:0,18,196	0/0:36,0:2:3.01:0,3,39	0/0:16,0:12:33.11:0,33,428	0/0:27,0:21:56.98:0,57,669	0/0:30,0:25:57.28:0,57,745	./.	0/0:23,0:18:54.15:0,54,672	0/0:19,0:15:42.14:0,42,543	0/0:24,0:23:63.20:0,63,817	1/1:3,3:3:9.02:96,9,0	0/0:14,0:13:18.86:0,19,340	0/0:22,0:21:60.19:0,60,778	0/0:12,0:12:36.12:0,36,463	0/0:23,0:18:48.14:0,48,609	0/0:30,0:27:66.20:0,66,837	0/0:24,0:18:48.16:0,48,619	0/1:7,2:5:45.86:117,0,46	0/1:8,1:7:6.02:6,0,59	1/1:5,2:5:6.02:85,6,0	0/0:11,0:11:33.10:0,33,416	0/0:19,0:17:51.17:0,51,662	0/0:39,0:33:61.82:0,62,847	0/0:25,0:24:69.22:0,69,895	0/0:37,0:22:66.21:0,66,854	0/1:18,1:13:99:122,0,130	0/0:15,0:11:24.08:0,24,311
chr10	107724291	.	AAG	A	436.07	PASS	AB=0.969;AC=12;AF=0.222;AN=54;BaseQRankSum=8.815;DP=468;FS=3.272;HRun=0;HaplotypeScore=70.9861;InbreedingCoeff=0.2461;MQ=40.05;MQ0=62;MQRankSum=-7.167;QD=2.49;ReadPosRankSum=2.398;VQSLOD=1.3504;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:22:6.52:7,0,500	0/1:9,1:10:20.24:170,0,20	./.	0/0:10,0:1:3.01:0,3,39	0/0:15,0:9:21.07:0,21,272	0/0:20,0:15:33.99:0,34,463	0/0:28,0:22:45.56:0,46,547	1/1:16,1:3:2.88:15,3,0	0/0:17,0:13:30.96:0,31,370	0/0:14,0:10:27.09:0,27,349	0/0:13,0:12:36.12:0,36,458	0/0:10,0:9:19.17:0,19,141	0/0:14,0:14:2.76:0,3,283	0/0:14,0:10:21.07:0,21,272	0/0:5,0:5:14.64:0,15,165	0/0:15,0:9:21.05:0,21,273	0/1:26,1:22:61.57:62,0,376	0/1:15,1:12:57.45:57,0,211	1/1:10,0:5:14.48:112,14,0	0/0:11,0:9:9.57:0,10,96	1/1:12,1:7:5.94:43,6,0	0/0:7,0:6:18.06:0,18,232	0/0:14,0:11:30.09:0,30,378	0/1:39,0:30:2.98:3,0,650	0/0:28,0:25:56.71:0,57,743	0/0:29,0:13:15.15:0,15,418	0/1:16,0:11:44.57:115,0,45	0/0:22,0:14:30.10:0,30,401
chr10	107724294	.	A	AG	889.90	PASS	AB=0.970;AC=12;AF=0.222;AN=54;BaseQRankSum=8.950;DP=471;FS=0.644;HRun=1;HaplotypeScore=66.7886;InbreedingCoeff=0.0759;MQ=39.37;MQ0=64;MQRankSum=-7.603;QD=4.63;ReadPosRankSum=2.399;VQSLOD=0.4640;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:21:35.35:35,0,457	0/1:10,0:10:23.60:252,0,24	./.	0/0:10,0:1:3.01:0,3,39	0/0:15,0:9:21.07:0,21,272	0/0:19,0:14:13.16:0,13,410	0/0:27,0:21:2.38:0,2,516	0/1:21,0:5:8.97:9,0,10	0/0:16,0:12:30:0,30,314	0/0:14,0:11:27.05:0,27,349	0/0:15,0:14:33.24:0,33,449	0/0:11,0:10:24.11:0,24,188	0/1:12,2:14:19.69:20,0,229	0/0:12,1:9:21.07:0,21,272	0/0:5,0:5:11.94:0,12,156	0/0:14,0:9:21.07:0,21,272	0/1:24,1:21:44.11:44,0,365	0/1:17,1:13:98.95:99,0,188	1/1:10,0:5:15:185,15,0	0/0:12,0:9:12.67:0,13,109	1/1:10,3:7:5.54:83,6,0	0/0:8,0:7:18.93:0,19,222	0/0:14,0:11:30.10:0,30,382	0/1:37,1:31:63.11:63,0,604	0/0:29,0:25:60.06:0,60,737	0/0:28,0:12:34.65:0,35,420	0/1:16,0:11:70.64:251,0,71	0/0:22,0:14:30.05:0,30,370
chr10	107724295	.	GAA	G	838.76	PASS	AB=0.883;AC=13;AF=0.241;AN=54;BaseQRankSum=8.746;DP=475;FS=2.261;HRun=2;HaplotypeScore=70.5470;InbreedingCoeff=0.1583;MQ=39.06;MQ0=62;MQRankSum=-7.292;QD=4.37;ReadPosRankSum=3.215;VQSLOD=-0.5309;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,1:21:17.40:17,0,458	0/1:4,6:10:17.73:254,0,18	./.	0/0:10,0:1:3.01:0,3,39	0/0:15,0:9:21.07:0,21,272	0/0:18,1:14:18.84:0,19,451	0/0:29,0:23:36.25:0,36,560	1/1:20,2:7:0.04:7,0,0	0/0:15,0:11:27.91:0,28,295	0/0:14,0:11:30.09:0,30,377	0/0:16,0:15:43.47:0,43,498	0/0:11,0:10:23.76:0,24,189	0/1:13,0:13:19.19:19,0,251	0/0:14,0:9:21.07:0,21,272	0/0:5,0:5:11.86:0,12,155	0/0:13,0:9:21.07:0,21,305	0/1:26,0:21:44.69:45,0,380	0/1:17,1:13:82.12:82,0,233	1/1:6,5:5:14.99:182,15,0	0/0:13,0:10:16.33:0,16,134	1/1:11,1:6:5.70:78,6,0	0/0:8,0:7:19.87:0,20,225	0/0:13,0:11:30.10:0,30,383	0/1:37,2:32:61.08:61,0,681	0/0:29,0:25:60.15:0,60,809	0/0:30,0:14:35.54:0,36,443	0/1:9,7:11:85.53:246,0,86	0/0:22,0:14:30.06:0,30,392
chr10	107724331	.	GA	G	230.32	PASS	AB=0.852;AC=5;AF=0.096;AN=52;BaseQRankSum=6.628;DP=426;FS=5.744;HRun=2;HaplotypeScore=53.7669;InbreedingCoeff=0.2521;MQ=38.16;MQ0=59;MQRankSum=-4.527;QD=6.40;ReadPosRankSum=0.263;VQSLOD=0.6351;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:14:33.09:0,33,433	1/1:1,4:5:12.02:131,12,0	./.	./.	0/0:15,0:11:15.05:0,15,204	0/0:25,0:19:44.94:0,45,554	0/0:21,0:18:45.14:0,45,599	0/0:17,0:4:6.02:0,6,84	0/0:13,0:8:17.07:0,17,194	0/0:19,0:13:39.13:0,39,539	0/0:15,0:14:33.10:0,33,446	0/0:10,0:5:10.28:0,10,133	0/0:13,0:11:20.84:0,21,281	0/0:15,0:9:15.05:0,15,204	0/0:11,0:9:24.04:0,24,299	0/0:16,0:9:18.06:0,18,253	0/0:23,0:19:13.48:0,13,204	0/0:19,0:13:8.79:0,9,336	0/1:5,1:3:27.25:27,0,35	0/0:9,0:6:12.04:0,12,157	0/1:11,0:6:15.80:16,0,110	0/0:6,0:5:12.04:0,12,163	0/0:10,0:8:12.40:0,12,164	0/0:40,0:33:49.93:0,50,675	0/0:20,0:16:38.80:0,39,514	0/0:32,0:16:48.16:0,48,665	0/1:8,6:9:65.62:173,0,66	0/0:17,0:10:21.07:0,21,290
chr10	107724459	.	G	GA	48.95	PASS	AB=0.571;AC=1;AF=0.028;AN=36;BaseQRankSum=-0.790;DP=260;FS=16.207;HRun=1;HaplotypeScore=35.6305;InbreedingCoeff=0.0508;MQ=43.70;MQ0=13;MQRankSum=1.539;QD=12.24;ReadPosRankSum=0.180;VQSLOD=0.3529;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:9:11.84:0,12,84	./.	0/0:28,0:8:24.05:0,24,262	0/0:24,0:9:7.50:0,8,170	./.	0/0:15,0:10:10.23:0,10,58	./.	./.	0/0:9,0:5:2.96:0,3,19	0/0:18,0:14:36.95:0,37,213	./.	./.	0/0:8,0:3:5.98:0,6,46	0/0:11,0:7:5.86:0,6,35	0/0:9,0:5:2.22:0,2,7	0/0:12,0:10:5.21:0,5,31	0/0:8,0:6:8.91:0,9,63	./.	./.	./.	0/1:0,3:4:4.78:120,0,5	0/0:12,0:6:2.94:0,3,18	0/0:9,0:6:5.94:0,6,43	0/0:6,1:6:2.98:0,3,22	0/0:12,0:10:8.47:0,8,54	0/0:13,0:8:17.71:0,18,113	./.	0/0:8,0:6:2.92:0,3,17
chr10	107724465	.	AGAG	A	376.64	PASS	AB=1.000;AC=18;AF=0.391;AN=46;BaseQRankSum=0.370;DP=304;FS=15.450;HRun=0;HaplotypeScore=37.7181;InbreedingCoeff=0.1105;MQ=41.19;MQ0=25;MQRankSum=-3.285;QD=2.65;ReadPosRankSum=2.600;VQSLOD=-0.0376;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:8:2.93:20,3,0	./.	0/0:29,0:8:9.82:0,10,107	0/0:25,0:9:1.63:0,2,45	0/0:13,0:7:3.27:0,3,13	0/1:18,0:13:1.13:47,0,1	1/1:10,0:7:0.47:1,0,0	0/0:9,0:5:5.85:0,6,36	1/1:10,0:6:5.97:47,6,0	0/1:17,0:13:60.06:156,0,60	0/0:13,0:7:2.80:0,3,13	./.	./.	./.	1/1:9,0:6:2.97:20,3,0	./.	0/1:7,0:4:15.98:16,0,34	0/0:6,0:4:5.99:0,6,55	0/0:6,0:3:5.97:0,6,60	0/0:1,0:2:0:0,0,0	0/0:7,0:7:8.65:0,9,56	0/0:12,0:6:1.70:0,2,12	1/1:8,0:5:7.18:43,7,0	1/1:8,0:6:2.91:19,3,0	0/1:12,0:10:10.69:31,0,11	0/1:18,0:10:53.01:93,0,53	0/0:4,0:3:2.80:0,3,13	0/1:9,0:7:14.91:15,0,23
chr10	107725265	.	G	GC	2114.01	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-3.130;DP=590;FS=9.707;HRun=8;HaplotypeScore=62.5917;InbreedingCoeff=0.9770;MQ=76.58;MQ0=0;MQRankSum=0.570;QD=20.13;ReadPosRankSum=-3.539;VQSLOD=1.8857;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,1143	1/1:3,3:6:11.99:124,12,0	0/0:13,0:13:15.24:0,15,113	0/0:16,0:16:8.97:0,9,132	0/0:18,0:18:44.82:0,45,390	0/0:21,0:21:48:0,48,435	0/0:28,0:28:71.99:0,72,645	1/1:9,8:18:26.90:280,27,0	0/0:20,0:20:50.94:0,51,458	0/0:21,0:21:57.03:0,57,521	0/0:14,0:14:33.02:0,33,302	0/0:28,0:28:78.01:0,78,705	0/0:25,0:25:72:0,72,648	0/0:30,0:30:84.02:0,84,765	0/0:18,0:17:45:0,45,407	0/0:16,0:16:48.03:0,48,439	0/0:32,0:32:90.03:0,90,818	0/0:26,0:26:69.03:0,69,631	1/1:3,10:14:32.89:346,33,0	1/1:3,16:19:32.93:320,33,0	1/1:1,31:32:66.20:762,66,0	0/0:19,0:19:51.03:0,51,466	0/0:14,0:14:21:0,21,191	0/0:28,0:28:77.99:0,78,700	0/0:23,0:23:63.02:0,63,576	0/0:20,0:20:42.01:0,42,384	1/1:3,13:15:42.07:469,42,0	0/0:9,0:10:22.90:0,23,181
chr10	107725962	.	A	AG	1362.60	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.740;DP=499;FS=14.740;HRun=0;HaplotypeScore=74.2581;InbreedingCoeff=0.8791;MQ=61.28;MQ0=14;MQRankSum=-0.168;QD=14.05;ReadPosRankSum=-1.070;VQSLOD=3.9104;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:67.23:0,67,674	1/1:11,0:11:24:149,24,0	0/0:20,0:9:4.05:0,4,154	0/0:19,0:12:3.99:0,4,146	0/0:24,0:24:54.31:0,54,501	0/0:20,0:20:44.86:0,45,466	0/0:12,0:10:29.80:0,30,272	1/1:4,16:21:51.72:459,52,0	0/0:12,0:12:32.81:0,33,326	0/0:27,0:26:63.82:0,64,659	0/0:19,0:17:41.75:0,42,404	0/0:11,0:11:26.98:0,27,176	0/0:15,0:15:39.28:0,39,344	0/0:6,0:5:8.96:0,9,83	0/0:11,0:11:20.53:0,21,224	0/0:12,0:10:23.61:0,24,245	0/0:37,0:37:82.75:0,83,862	0/0:18,0:18:50.93:0,51,536	1/1:14,2:16:7.40:282,7,0	1/1:14,5:19:15.81:251,16,0	1/1:8,1:8:4.26:40,4,0	0/0:23,0:23:53.06:0,53,571	0/0:17,0:17:44.50:0,44,423	0/0:17,0:17:43.80:0,44,501	0/0:19,0:17:39.59:0,40,379	0/0:22,0:21:53.51:0,54,558	1/1:7,14:20:26.59:357,27,0	0/0:13,0:12:31.88:0,32,365
chr10	107725964	.	G	GAA	2983.38	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=0.567;DP=485;FS=12.913;HRun=15;HaplotypeScore=71.3506;InbreedingCoeff=0.8643;MQ=63.40;MQ0=12;MQRankSum=0.225;QD=22.95;ReadPosRankSum=-2.578;VQSLOD=1.3772;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:54.11:0,54,708	1/1:11,0:11:32.75:402,33,0	0/0:21,0:10:9.41:0,9,154	0/1:19,0:12:16.65:17,0,178	0/0:21,0:21:51.07:0,51,626	0/0:18,0:18:45.13:0,45,571	0/0:12,0:10:25.32:0,25,321	1/1:23,1:24:66.65:922,67,0	0/0:11,0:11:32.21:0,32,348	0/0:26,0:25:69.07:0,69,891	0/0:20,0:18:37.66:0,38,444	1/1:13,0:13:10.96:76,11,0	0/0:13,0:13:32.64:0,33,354	0/0:5,0:4:8.88:0,9,65	0/0:12,0:12:26.67:0,27,319	0/0:12,0:10:20.94:0,21,263	0/0:36,0:36:86.97:0,87,1082	0/0:19,0:19:48.12:0,48,603	1/1:6,11:17:45:650,45,0	1/1:18,0:18:47.70:565,48,0	1/1:2,6:8:6.01:69,6,0	0/0:22,0:22:54.03:0,54,660	0/0:15,0:15:39.22:0,39,438	0/0:17,0:17:48.08:0,48,602	0/0:16,0:15:38.34:0,38,436	0/0:21,0:20:60.14:0,60,793	1/1:19,1:19:39.02:477,39,0	0/0:12,0:12:33.09:0,33,435
chr10	107726684	.	TA	T	1586.38	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.647;DP=426;FS=5.249;HRun=11;HaplotypeScore=44.0280;InbreedingCoeff=0.9083;MQ=74.37;MQ0=1;MQRankSum=0.282;QD=16.52;ReadPosRankSum=-0.414;VQSLOD=4.0641;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,112,1146	1/1:2,0:4:4.07:12,4,0	0/0:12,0:10:18.96:0,19,187	0/0:11,0:11:11.76:0,12,101	0/0:8,0:8:12.03:0,12,128	0/0:12,0:12:36:0,36,362	0/0:27,1:28:47.57:0,48,689	1/1:4,16:21:49.16:377,49,0	0/0:17,0:17:42.11:0,42,448	0/0:13,0:13:33.07:0,33,339	0/0:9,1:10:2.42:0,2,231	1/1:3,11:14:29.96:246,30,0	0/0:10,0:10:30.08:0,30,320	0/0:16,0:16:41.81:0,42,406	0/0:23,0:23:66.17:0,66,703	0/0:13,0:13:36.07:0,36,371	0/0:22,0:21:48.12:0,48,511	0/0:13,0:13:27.07:0,27,288	1/1:4,15:19:44.93:369,45,0	1/1:1,9:10:20.75:160,21,0	1/1:2,12:14:6.97:264,7,0	0/0:11,0:11:27.07:0,27,288	0/0:13,0:13:36.07:0,36,371	0/0:14,0:14:42:0,42,410	0/0:11,0:11:24.06:0,24,256	0/0:23,0:23:61.01:0,61,625	1/1:0,14:14:41.95:345,42,0	0/0:7,0:8:20.89:0,21,206
chr10	107726949	.	G	GC	429.46	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.948;DP=621;FS=3.640;HRun=6;HaplotypeScore=61.1199;InbreedingCoeff=0.9973;MQ=88.59;MQ0=0;MQRankSum=-1.192;QD=28.63;ReadPosRankSum=0.317;VQSLOD=4.3362;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,123,1254	0/0:10,0:10:24.05:0,24,244	0/0:28,0:28:49.39:0,49,638	0/0:22,0:22:45.06:0,45,444	0/0:21,0:21:48.11:0,48,489	0/0:23,0:23:69.16:0,69,703	0/0:20,0:20:57.13:0,57,582	0/0:20,0:20:51.09:0,51,510	0/0:23,0:23:63.11:0,63,629	0/0:16,0:16:36.07:0,36,367	0/0:21,0:21:54.12:0,54,551	1/1:1,14:15:42.13:524,42,0	0/0:18,0:18:54.11:0,54,543	0/0:23,0:23:66.15:0,66,673	0/0:24,0:24:54.11:0,54,544	0/0:24,0:24:72.16:0,72,734	0/0:28,0:28:69.14:0,69,704	0/0:23,0:23:69.13:0,69,695	0/0:13,0:13:36.08:0,36,367	0/0:28,0:28:81.17:0,81,820	0/0:25,0:25:69.15:0,69,704	0/0:23,0:23:66.15:0,66,673	0/0:26,0:26:75.17:0,75,763	0/0:27,0:27:75.17:0,75,765	0/0:14,0:14:42.10:0,42,429	0/0:13,0:13:33.07:0,33,337	0/0:30,0:30:75.16:0,75,765	0/0:16,0:16:45.10:0,45,459
chr10	107728656	.	CG	C	5559.88	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.497;DP=638;FS=5.268;HRun=2;HaplotypeScore=62.8778;InbreedingCoeff=0.9995;MQ=85.48;MQ0=0;MQRankSum=-1.903;QD=35.64;ReadPosRankSum=0.948;VQSLOD=5.3404;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,1884	1/1:0,13:13:36.12:467,36,0	0/0:18,0:18:25.42:0,25,547	0/0:22,0:22:63.21:0,63,915	0/0:16,0:16:45.14:0,45,641	0/0:18,0:18:54.16:0,54,787	0/0:34,0:34:96.33:0,96,1438	1/1:0,18:18:54.18:701,54,0	0/0:30,0:30:87.28:0,87,1283	0/0:25,0:25:75.25:0,75,1103	0/0:11,0:11:30.09:0,30,429	1/1:0,21:21:60.19:778,60,0	0/0:32,0:32:93.32:0,93,1392	0/0:25,0:25:72.24:0,72,1078	0/0:25,0:25:75.22:0,75,1067	0/0:24,0:24:69.21:0,69,996	0/0:24,0:24:72.24:0,72,1077	0/0:23,0:23:66.20:0,66,967	1/1:1,24:25:72.19:889,72,0	1/1:0,16:16:45.15:583,45,0	1/1:2,44:46:99:1558,120,0	0/0:20,0:20:54.17:0,54,790	0/0:17,0:17:51.15:0,51,741	0/0:32,0:32:96.33:0,96,1436	0/0:13,0:13:36.12:0,36,540	0/0:19,0:19:57.15:0,57,810	1/1:0,17:17:45.15:584,45,0	0/0:11,0:11:33.09:0,33,473
chr10	107730042	.	G	GC	6722.05	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-15.523;DP=687;FS=1.050;HRun=3;HaplotypeScore=59.2823;InbreedingCoeff=0.9968;MQ=90.98;MQ0=1;MQRankSum=-1.360;QD=37.55;ReadPosRankSum=0.137;VQSLOD=5.1575;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,1385	1/1:0,5:5:15.05:207,15,0	0/0:35,0:35:92.61:0,93,1063	0/0:20,0:20:49.39:0,49,572	0/0:19,0:19:51.14:0,51,599	0/0:28,0:28:80.89:0,81,923	0/0:38,0:38:99:0,111,1320	1/1:2,31:33:87.28:1194,87,0	0/0:28,0:28:81.23:0,81,959	0/0:22,0:22:60.18:0,60,717	0/0:9,0:9:27.08:0,27,315	1/1:1,20:21:57.19:798,57,0	0/0:20,0:20:60.17:0,60,709	0/0:11,0:11:30.09:0,30,360	0/0:31,0:31:93.27:0,93,1104	0/0:25,0:25:75.23:0,75,900	0/0:28,0:28:81.25:0,81,972	0/0:20,0:19:54.17:0,54,648	1/1:3,25:28:75.23:1020,75,0	1/1:1,20:21:60.16:818,60,0	1/1:2,40:42:99:1554,111,0	0/0:20,0:20:54.16:0,54,647	0/0:16,0:16:48.15:0,48,573	0/0:35,0:35:99:0,102,1198	0/0:19,0:19:57.17:0,57,673	0/0:22,0:22:63.19:0,63,756	1/1:0,29:29:81.27:1132,81,0	0/0:20,0:20:60.18:0,60,720
chr10	107730399	.	CAG	C	428.46	PASS	AB=0.910;AC=24;AF=0.462;AN=52;BaseQRankSum=5.418;DP=583;FS=3.849;HRun=0;HaplotypeScore=75.3166;InbreedingCoeff=-0.2401;MQ=80.49;MQ0=21;MQRankSum=-1.330;QD=1.16;ReadPosRankSum=2.081;VQSLOD=1.4689;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:46,1:48:16.37:16,0,311	0/0:11,0:11:8.59:0,9,75	./.	0/0:54,0:18:0:0,0,0	0/0:15,0:14:0.89:0,1,2	0/0:13,0:12:9.01:0,9,112	0/1:26,0:28:5.09:5,0,60	./.	0/1:17,0:18:41.95:42,0,225	0/0:16,0:16:6.01:0,6,68	0/1:15,0:15:4.46:4,0,71	0/1:10,3:13:24.33:26,0,24	0/1:9,0:9:17.02:17,0,58	0/1:16,7:24:52.63:53,0,55	1/1:14,0:14:3.01:32,3,0	0/1:13,3:17:40.56:41,0,238	0/1:16,1:19:62.52:63,0,224	0/1:14,4:17:46.59:47,0,159	1/1:13,0:13:2.84:14,3,0	1/1:10,0:15:2.84:14,3,0	1/1:27,0:27:5.84:39,6,0	0/1:12,0:12:13.25:13,0,65	0/1:15,0:15:49.42:49,0,94	0/1:23,4:27:20.29:20,0,259	0/1:17,1:18:23.30:23,0,59	0/0:14,0:14:20.99:0,21,214	1/1:12,0:18:11.04:56,11,0	0/0:12,0:12:3.95:0,4,47
chr10	107731647	.	C	CCCTCGTGTGTGTGTGTG	11644.06	PASS	AB=0.722;AC=48;AF=0.960;AN=50;BaseQRankSum=-0.313;DP=221;FS=16.970;HRun=0;HaplotypeScore=195.0198;InbreedingCoeff=-0.1059;MQ=76.48;MQ0=1;MQRankSum=-2.540;QD=54.16;ReadPosRankSum=0.852;VQSLOD=3.1109;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,0:1:3.01:88,3,0	0/1:5,0:7:22.30:466,0,22	0/1:5,1:9:15.67:1261,0,16	1/1:6,0:5:3.01:94,3,0	1/1:4,0:4:6.02:367,6,0	1/1:15,0:15:30.01:802,30,0	1/1:9,0:9:27.07:825,27,0	1/1:12,0:12:8.05:105,8,0	1/1:10,0:10:24.08:1096,24,0	./.	1/1:8,0:8:15.01:562,15,0	1/1:9,0:9:9.03:400,9,0	1/1:8,0:8:14.89:174,15,0	1/1:19,0:19:27.01:1139,27,0	1/1:21,0:21:31.28:859,31,0	1/1:8,0:8:12.04:645,12,0	1/1:9,0:9:15.04:570,15,0	1/1:7,0:7:17.97:678,18,0	1/1:1,0:1:3.01:40,3,0	1/1:12,0:12:9:164,9,0	1/1:3,0:3:3.01:184,3,0	1/1:7,0:7:2.97:20,3,0	1/1:12,0:12:9.03:153,9,0	1/1:12,0:12:15.94:318,16,0	1/1:1,0:1:3.01:230,3,0	./.	1/1:4,0:4:12.03:404,12,0
chr10	107754798	.	GA	G	165.75	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.096;DP=469;FS=10.569;HRun=10;HaplotypeScore=46.5694;InbreedingCoeff=0.9103;MQ=58.55;MQ0=11;MQRankSum=0.891;QD=11.84;ReadPosRankSum=0.636;VQSLOD=1.6552;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:78.19:0,78,852	0/0:5,0:5:12.03:0,12,133	0/0:7,1:5:11.99:0,12,119	0/0:13,0:6:15:0,15,147	0/0:23,0:21:51.11:0,51,550	0/0:12,0:13:35.93:0,36,378	0/0:20,0:20:60.11:0,60,641	0/0:22,0:20:54.13:0,54,589	0/0:14,0:14:39.58:0,40,431	0/0:9,0:8:21.06:0,21,232	0/0:23,0:23:50.18:0,50,575	1/1:4,10:14:29.99:260,30,0	0/0:10,0:10:21.06:0,21,230	0/0:15,0:15:39.10:0,39,428	0/0:15,0:14:42.11:0,42,465	0/0:15,0:15:36.57:0,37,399	0/0:36,1:36:46.10:0,46,724	0/0:27,1:29:77.96:0,78,802	0/0:12,0:12:30.08:0,30,332	0/0:15,0:13:33.08:0,33,355	0/0:12,0:12:33.09:0,33,365	0/0:14,0:14:33.08:0,33,357	0/0:13,0:13:26.65:0,27,268	0/0:22,0:20:51.14:0,51,564	0/0:13,0:13:33.08:0,33,357	0/0:20,1:21:28.10:0,28,538	0/0:20,0:20:60.15:0,60,653	0/0:9,0:8:18.05:0,18,198
chr10	107755046	.	A	AG	2383.20	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.058;DP=478;FS=0.980;HRun=6;HaplotypeScore=144.9741;InbreedingCoeff=0.9461;MQ=81.26;MQ0=1;MQRankSum=-8.554;QD=22.48;ReadPosRankSum=-2.089;VQSLOD=1.4166;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:60.11:0,60,601	1/1:1,0:2:2.94:18,3,0	0/0:32,0:26:35.76:0,36,449	0/0:25,0:20:14.08:0,14,301	0/0:16,0:16:35.82:0,36,349	0/0:20,0:20:51.11:0,51,518	0/0:14,0:14:36.06:0,36,357	1/1:8,16:24:57.09:660,57,0	0/0:21,0:21:54.11:0,54,550	0/0:16,0:15:39.08:0,39,394	0/0:15,0:15:42.08:0,42,422	0/0:17,0:17:48.07:0,48,471	0/0:15,0:15:36.08:0,36,367	0/0:10,0:10:24.05:0,24,245	0/0:16,0:16:27.04:0,27,268	0/0:11,0:11:30.05:0,30,299	0/0:26,0:26:63.13:0,63,641	0/0:26,0:26:69.15:0,69,699	1/1:9,11:19:42.12:500,42,0	1/1:2,17:18:48:554,48,0	1/1:8,11:19:27:300,27,0	0/0:9,0:9:24.05:0,24,245	0/0:14,0:14:33.06:0,33,330	0/0:13,0:13:27.06:0,27,274	0/0:8,0:8:24.05:0,24,245	0/0:17,0:17:45.10:0,45,458	1/1:7,15:22:50.60:531,51,0	0/0:5,0:5:9.02:0,9,92
chr10	107755055	.	ACT	A	1947.44	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.899;DP=438;FS=0.932;HRun=0;HaplotypeScore=118.9964;InbreedingCoeff=0.9105;MQ=75.25;MQ0=5;MQRankSum=-9.006;QD=19.87;ReadPosRankSum=-1.642;VQSLOD=3.7382;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:71.90:0,72,981	1/1:1,0:1:2.74:12,3,0	0/0:22,0:15:19.66:0,20,305	0/0:26,0:20:8.94:0,9,266	0/0:17,0:17:35.86:0,36,469	0/0:18,0:18:53.97:0,54,695	0/0:14,0:13:23:0,23,444	1/1:20,3:23:62.83:583,63,0	0/0:21,0:20:48.01:0,48,660	0/0:15,0:15:39.02:0,39,510	0/0:15,0:15:36.01:0,36,522	0/0:13,0:13:39.09:0,39,569	0/0:14,0:14:38.99:0,39,474	0/0:10,0:10:5.25:0,5,325	0/0:10,0:10:27.03:0,27,332	0/0:8,0:8:20.94:0,21,239	0/0:26,0:26:69.97:0,70,854	0/0:25,0:25:66.13:0,66,965	1/1:21,1:18:47.59:416,48,0	1/1:18,4:20:51.03:469,51,0	1/1:12,2:14:23.91:198,24,0	0/0:8,0:8:21.07:0,21,347	0/0:15,0:15:35.92:0,36,462	0/0:11,0:11:28.63:0,29,415	0/0:6,0:6:17.86:0,18,185	0/0:18,0:18:41.75:0,42,685	1/1:15,1:16:47.94:447,48,0	0/0:3,0:3:8.86:0,9,84
chr10	107755056	.	CTCT	C	2974.85	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.460;DP=439;FS=1.499;HRun=0;HaplotypeScore=122.5330;InbreedingCoeff=0.9447;MQ=73.10;MQ0=6;MQRankSum=-8.575;QD=30.36;ReadPosRankSum=-1.151;VQSLOD=3.6580;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.12:0,72,1278	1/1:0,1:1:3.01:34,3,0	0/0:22,0:15:29.24:0,29,415	0/0:24,0:18:15.42:0,15,315	0/0:18,0:18:36.05:0,36,615	0/0:18,0:18:54.11:0,54,879	0/0:14,0:13:29.77:0,30,591	1/1:7,14:23:63.03:875,63,0	0/0:21,0:20:51.05:0,51,853	0/0:15,0:15:42.12:0,42,690	0/0:14,0:14:36.01:0,36,650	0/0:14,0:14:42.05:0,42,710	0/0:14,0:14:39.05:0,39,588	0/0:9,0:10:26.29:0,26,453	0/0:9,0:9:27.04:0,27,406	0/0:8,0:8:21.02:0,21,294	0/0:27,0:26:72.12:0,72,1186	0/0:25,0:25:66.13:0,66,1192	1/1:7,13:18:47.98:647,48,0	1/1:8,13:20:51.03:693,51,0	1/1:6,7:14:23.49:262,23,0	0/0:8,0:8:21.07:0,21,446	0/0:15,0:15:36.02:0,36,589	0/0:11,0:11:30.02:0,30,552	0/0:8,0:8:18.03:0,18,239	0/0:18,0:18:50.63:0,51,918	1/1:6,9:16:48:644,48,0	0/0:3,0:3:9.02:0,9,124
chr10	107755058	.	CT	C	557.57	PASS	AB=0.799;AC=16;AF=0.286;AN=56;BaseQRankSum=7.101;DP=457;FS=0.501;HRun=13;HaplotypeScore=122.9372;InbreedingCoeff=0.5058;MQ=69.27;MQ0=12;MQRankSum=-8.166;QD=3.82;ReadPosRankSum=-0.114;VQSLOD=1.5383;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,2:30:16.26:0,16,471	1/1:1,0:1:2.98:22,3,0	0/0:21,0:14:12.06:0,12,124	0/0:21,0:16:7.47:0,7,72	0/0:19,0:19:8.12:0,8,229	0/0:16,1:17:19.95:0,20,331	0/0:13,0:12:23.20:0,23,257	1/1:24,0:23:33.62:131,34,0	0/0:19,1:19:1.88:0,2,297	0/0:15,2:18:7.97:0,8,226	0/0:16,0:16:27.04:0,27,263	0/0:15,0:15:35.72:0,36,310	0/0:13,0:13:21.03:0,21,200	0/0:11,0:11:23.47:0,23,197	0/0:11,0:12:17.86:0,18,160	0/1:6,1:8:9.90:10,0,72	0/1:25,3:25:8.85:9,0,383	0/0:25,0:25:55.87:0,56,519	1/1:22,0:18:29.68:128,30,0	1/1:22,0:20:29.22:129,29,0	1/1:13,0:13:7.70:37,8,0	0/0:10,0:9:18.77:0,19,179	0/0:15,1:16:2.13:0,2,183	0/0:14,0:12:5.35:0,5,211	0/1:6,2:8:31.80:32,0,46	0/0:18,0:18:35.51:0,36,373	1/1:16,0:16:36.58:206,37,0	0/1:1,2:3:20.22:35,0,20
chr10	107755354	.	G	GA	2724.71	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-2.811;DP=544;FS=13.172;HRun=9;HaplotypeScore=63.1124;InbreedingCoeff=0.9214;MQ=78.82;MQ0=0;MQRankSum=-0.192;QD=19.32;ReadPosRankSum=-1.799;VQSLOD=2.3021;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:82.29:0,82,862	1/1:2,6:8:12.03:133,12,0	0/0:12,0:12:22.18:0,22,176	0/1:21,0:22:1.47:1,0,234	0/0:23,0:23:56.96:0,57,491	0/0:25,0:25:65.97:0,66,572	0/0:20,0:20:50.98:0,51,442	1/1:7,19:26:57.11:610,57,0	0/0:14,1:15:8.81:0,9,305	0/0:25,0:25:59.98:0,60,520	0/0:19,0:19:50.99:0,51,442	0/0:23,0:23:62.93:0,63,536	0/0:12,0:12:29.98:0,30,256	0/0:16,0:16:47.92:0,48,405	0/0:11,0:12:32.03:0,32,266	0/0:25,0:25:68.98:0,69,599	0/0:15,0:15:44.97:0,45,385	0/0:18,0:18:41.99:0,42,365	1/1:3,20:23:57.13:620,57,0	1/1:4,15:19:39.06:418,39,0	1/1:3,18:21:42.11:465,42,0	0/0:21,0:21:59.98:0,60,520	0/0:16,0:16:35.98:0,36,313	0/0:24,1:25:38.78:0,39,561	0/0:11,0:11:29.98:0,30,260	0/0:17,0:17:41.95:0,42,360	1/1:3,18:22:60.16:663,60,0	0/0:10,0:10:29.99:0,30,260
chr10	107756147	.	AACACACACACACAC	A	2253.28	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.603;DP=582;FS=0.705;HRun=0;HaplotypeScore=209.4422;InbreedingCoeff=0.8538;MQ=66.75;MQ0=7;MQRankSum=-5.131;QD=19.77;ReadPosRankSum=-0.179;VQSLOD=2.7013;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:46:99:0,102,5633	0/0:2,0:2:3.01:0,3,194	0/0:27,0:19:5.61:0,6,104	0/0:26,0:15:3.01:0,3,49	0/0:11,0:11:21.07:0,21,1328	0/0:22,0:22:39.13:0,39,2327	0/0:24,0:29:39.13:0,39,2093	1/1:29,0:29:12:211,12,0	0/0:19,0:24:42.14:0,42,2116	0/0:16,0:17:18.06:0,18,870	0/0:10,0:10:15.05:0,15,955	0/0:21,0:21:15.03:0,15,587	0/0:9,0:9:9.03:0,9,469	0/0:21,0:22:42.14:0,42,2435	0/0:27,0:27:48.16:0,48,2746	0/0:11,0:14:33.11:0,33,1922	0/0:37,0:44:87.26:0,87,4708	0/0:22,0:21:51.18:0,51,3028	1/1:9,7:16:18.03:451,18,0	1/1:11,7:21:27:679,27,0	1/1:18,10:30:9.36:66,9,0	0/0:15,0:15:33.10:0,33,1646	0/0:8,0:10:18.06:0,18,911	0/0:21,0:23:48.16:0,48,2897	0/0:10,0:12:27.09:0,27,1397	0/0:23,0:24:40.69:0,41,2096	1/1:8,8:18:30.53:1013,31,0	0/0:8,0:8:21.07:0,21,1276
chr10	107757319	.	C	CCCAATAAAA	15805.45	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-7.913;DP=705;FS=0.739;HRun=0;HaplotypeScore=185.0765;InbreedingCoeff=0.9997;MQ=74.14;MQ0=0;MQRankSum=-15.066;QD=104.67;ReadPosRankSum=-3.964;VQSLOD=3.8111;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,114,3461	1/1:3,8:12:27.09:1320,27,0	0/0:28,0:28:80.29:0,80,1956	0/0:21,0:20:48.04:0,48,1139	0/0:14,0:14:38.92:0,39,1122	0/0:17,0:17:51.18:0,51,1520	0/0:23,0:23:69.19:0,69,1871	1/1:9,11:35:99:3656,102,0	0/0:26,0:26:69.24:0,69,2141	0/0:32,0:32:87.26:0,87,2439	0/0:20,0:20:60.19:0,60,1749	0/0:29,0:29:87.30:0,87,2671	0/0:27,0:27:78.27:0,78,2238	0/0:28,0:28:78.21:0,78,2131	0/0:31,0:31:87.21:0,87,2553	0/0:17,0:17:51.18:0,51,1540	0/0:29,0:29:84.29:0,84,2550	0/0:26,0:26:75.26:0,75,2278	1/1:10,11:28:72.18:2723,72,0	1/1:9,19:28:75.19:3325,75,0	1/1:5,13:23:48.16:2106,48,0	0/0:35,0:35:96.23:0,96,2808	0/0:26,0:26:72.22:0,72,2050	0/0:27,0:27:72.19:0,72,2042	0/0:15,0:15:42.14:0,42,1303	0/0:28,0:28:72.24:0,72,2167	1/1:3,18:25:57.17:2675,57,0	0/0:12,0:12:36.12:0,36,1065
chr10	107758167	.	AT	A	108.35	PASS	AB=0.938;AC=3;AF=0.054;AN=56;BaseQRankSum=4.107;DP=473;FS=0.000;HRun=10;HaplotypeScore=50.3043;InbreedingCoeff=0.7305;MQ=74.88;MQ0=0;MQRankSum=-0.213;QD=4.33;ReadPosRankSum=0.241;VQSLOD=-0.2330;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.16:0,69,745	1/1:1,9:10:23.95:201,24,0	0/1:14,1:13:1.55:2,0,190	0/0:11,0:10:17.79:0,18,179	0/0:16,0:16:33.06:0,33,348	0/0:14,0:14:40.29:0,40,411	0/0:20,0:20:54.13:0,54,589	0/0:32,0:32:81.20:0,81,880	0/0:9,0:9:18.05:0,18,199	0/0:16,0:16:45.12:0,45,498	0/0:11,0:11:33.09:0,33,365	0/0:22,1:23:34.05:0,34,575	0/0:14,1:15:16.04:0,16,396	0/0:13,0:13:39.09:0,39,422	0/0:18,0:18:48.13:0,48,531	0/0:17,0:17:48.12:0,48,524	0/0:25,1:26:46.11:0,46,720	0/0:30,0:30:78.20:0,78,855	0/0:29,0:29:75.18:0,75,813	0/0:13,0:13:36.09:0,36,388	0/0:9,0:9:24.06:0,24,265	0/0:7,0:7:18.05:0,18,199	0/0:9,0:9:27.07:0,27,299	0/0:17,0:17:48.11:0,48,522	0/0:17,2:19:19.04:0,19,427	0/0:19,0:19:42.11:0,42,465	0/0:20,0:20:54.13:0,54,583	0/0:10,0:10:24.06:0,24,265
chr10	107758982	.	GAC	G	155.39	PASS	AB=0.884;AC=13;AF=0.241;AN=54;BaseQRankSum=5.618;DP=539;FS=0.000;HRun=0;HaplotypeScore=76.9556;InbreedingCoeff=-0.1858;MQ=61.66;MQ0=10;MQRankSum=0.539;QD=0.60;ReadPosRankSum=1.036;VQSLOD=0.9842;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,6:42:62.85:63,0,614	1/1:2,0:4:2.83:14,3,0	./.	0/0:34,0:23:6.32:0,6,61	0/1:24,3:27:10.61:11,0,472	0/0:13,0:13:24.06:0,24,337	0/1:23,1:25:15.25:15,0,159	0/0:28,0:27:22.59:0,23,176	0/0:7,0:7:9.03:0,9,133	0/1:25,1:28:26.36:26,0,292	0/0:13,0:13:12.04:0,12,178	0/0:9,0:14:11.49:0,11,87	0/0:10,0:10:12.97:0,13,162	0/1:19,2:21:0.18:0,0,391	0/1:11,2:13:6.20:6,0,315	0/1:15,2:18:35.55:36,0,496	0/0:24,0:25:33.99:0,34,641	0/1:24,2:27:14.97:15,0,541	0/0:11,0:9:14.97:0,15,155	0/0:7,0:10:0.41:0,0,8	0/0:34,0:34:17.97:0,18,198	0/1:17,4:20:36.50:36,0,258	0/0:11,0:11:6.02:0,6,90	0/0:26,1:27:23.84:0,24,695	0/1:9,2:11:41.99:42,0,213	0/1:16,2:18:30.45:30,0,394	0/0:6,0:8:5.99:0,6,50	0/0:10,0:10:15.05:0,15,225
chr10	107759374	.	GGTGTGTACATGT	G	4825.47	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.884;DP=732;FS=1.595;HRun=0;HaplotypeScore=238.0135;InbreedingCoeff=0.9747;MQ=63.83;MQ0=3;MQRankSum=-6.200;QD=40.89;ReadPosRankSum=-3.057;VQSLOD=4.1491;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.22:0,78,3933	1/1:0,12:12:24.07:886,24,0	0/0:36,0:26:50.76:0,51,686	0/0:33,0:11:15.42:0,15,165	0/0:35,0:35:99:0,102,5822	0/0:29,0:29:78.21:0,78,4019	0/0:42,0:42:99:0,123,5314	1/1:4,19:23:53.73:857,54,0	0/0:21,0:21:60.18:0,60,2912	0/0:31,0:31:87.26:0,87,4114	0/0:20,0:20:54.16:0,54,2949	0/0:31,0:31:89.98:0,90,4289	0/0:25,0:25:63.17:0,63,3257	0/0:28,0:28:75.18:0,75,3725	0/0:15,0:15:42.08:0,42,1505	0/0:15,0:15:42.08:0,42,1746	0/0:24,0:24:66.06:0,66,3240	0/0:28,0:28:67.45:0,67,3424	1/1:1,14:15:41.98:858,42,0	1/1:1,16:17:24.04:795,24,0	1/1:1,28:29:6.02:221,6,0	0/0:34,0:34:90.24:0,90,4364	0/0:21,0:21:60.15:0,60,2900	0/0:42,0:42:99:0,111,5657	0/0:21,0:21:63.19:0,63,3537	0/0:27,0:27:75.22:0,75,3830	1/1:5,17:22:35.95:1208,36,0	0/0:28,0:28:75.26:0,75,4528
chr10	107760959	.	CTCTG	C	1823.07	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=8.414;DP=639;FS=7.558;HRun=0;HaplotypeScore=111.5032;InbreedingCoeff=0.9289;MQ=60.11;MQ0=14;MQRankSum=-2.796;QD=17.20;ReadPosRankSum=-0.996;VQSLOD=2.4079;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:84.14:0,84,1697	0/0:7,0:7:0.77:0,1,275	0/0:35,0:22:12.31:0,12,468	0/0:56,0:22:31.91:0,32,430	0/0:12,0:12:23.85:0,24,440	0/0:24,0:24:54.09:0,54,1034	0/0:28,0:28:60.16:0,60,1304	1/1:12,24:34:69:852,69,0	0/0:19,0:18:32.37:0,32,611	0/0:29,0:27:45.14:0,45,902	0/0:14,0:14:28.32:0,28,587	0/0:21,0:21:42.06:0,42,722	0/0:23,0:23:48.10:0,48,968	0/0:16,0:16:42.07:0,42,781	0/0:16,0:16:39.10:0,39,826	0/0:19,0:19:45.05:0,45,813	0/0:42,0:42:99:0,107,2274	0/0:37,0:37:90.16:0,90,1919	1/1:8,8:15:26.84:311,27,0	1/1:5,10:14:15.05:253,15,0	1/1:7,14:19:14.94:254,15,0	0/0:18,0:17:24.07:0,24,527	0/0:12,0:12:27.08:0,27,605	0/0:34,0:34:77.88:0,78,1694	0/0:12,0:12:33.08:0,33,722	0/0:17,0:16:24.54:0,25,504	1/1:5,13:18:21:322,21,0	./.
chr10	107760973	.	CTG	C	487.52	PASS	AB=0.950;AC=6;AF=0.111;AN=54;BaseQRankSum=9.539;DP=600;FS=2.597;HRun=0;HaplotypeScore=85.4798;InbreedingCoeff=0.2485;MQ=56.24;MQ0=18;MQRankSum=-3.153;QD=5.13;ReadPosRankSum=-0.820;VQSLOD=2.2657;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:95.77:0,96,1603	0/0:8,0:8:17.53:0,18,262	0/0:44,0:19:45.88:0,46,742	0/0:53,0:12:23.35:0,23,502	0/0:11,0:10:27.06:0,27,422	0/0:24,0:24:60.07:0,60,847	0/0:26,0:26:66.18:0,66,1130	0/1:35,0:33:99:312,0,186	0/0:14,1:14:36.02:0,36,535	0/0:16,0:16:45.14:0,45,785	0/0:11,0:11:27.55:0,28,472	0/0:23,0:23:47.80:0,48,656	0/0:17,0:17:51.11:0,51,827	0/0:16,0:16:48.06:0,48,726	0/0:18,0:18:51.06:0,51,786	0/0:18,0:18:41.23:0,41,758	0/0:41,0:41:99:0,112,1896	0/0:37,0:37:99:0,102,1713	0/1:12,1:12:66.80:112,0,67	0/1:12,1:12:20.47:49,0,20	1/1:17,1:16:13.99:67,14,0	0/0:14,0:13:27.07:0,27,466	0/0:10,0:10:27.08:0,27,485	0/0:35,0:35:92.95:0,93,1570	0/0:14,0:14:36.09:0,36,607	0/0:15,0:14:36.96:0,37,546	0/1:15,1:16:14.75:75,0,15	./.
chr10	107760991	.	CTG	C	206.58	PASS	AB=0.934;AC=13;AF=0.250;AN=52;BaseQRankSum=2.586;DP=601;FS=0.933;HRun=0;HaplotypeScore=90.6177;InbreedingCoeff=-0.2528;MQ=54.29;MQ0=22;MQRankSum=-0.410;QD=0.80;ReadPosRankSum=0.494;VQSLOD=1.7433;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:12.67:0,13,320	0/0:7,0:7:2.50:0,2,9	./.	./.	0/0:12,0:11:0.91:0,1,162	0/1:18,2:19:20.33:20,0,96	0/0:29,0:30:1.39:0,1,201	0/0:34,0:30:5.05:0,5,50	0/1:16,0:14:7.18:7,0,171	0/0:14,0:14:8.47:0,8,56	0/0:10,0:10:8.96:0,9,74	0/0:13,0:25:9.17:0,9,57	0/1:14,1:14:20.31:20,0,100	0/1:13,2:15:46.59:47,0,126	0/0:14,0:14:18.06:0,18,266	0/0:18,0:17:21.03:0,21,265	0/1:37,2:39:91.44:91,0,167	0/1:32,1:33:1.52:2,0,288	0/0:19,0:18:13.86:0,14,180	0/1:15,1:15:18.76:19,0,74	1/1:18,0:13:2.84:14,3,0	0/1:16,0:14:11.32:11,0,116	0/0:12,0:12:5.51:0,6,54	0/1:34,1:36:20.86:21,0,244	0/0:16,0:16:15.03:0,15,197	0/1:17,3:20:54.86:55,0,148	0/1:11,1:13:34.22:34,0,63	0/0:2,0:1:3.01:0,3,44
chr10	107762315	.	AGATGGATG	A	2058.05	PASS	AB=0.900;AC=9;AF=0.161;AN=56;BaseQRankSum=7.463;DP=629;FS=0.675;HRun=0;HaplotypeScore=179.1880;InbreedingCoeff=0.9408;MQ=65.06;MQ0=2;MQRankSum=-4.313;QD=17.15;ReadPosRankSum=-1.393;VQSLOD=2.9543;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:75.26:0,75,3051	0/0:8,0:11:24.08:0,24,734	0/0:22,0:16:12.04:0,12,436	0/0:31,0:28:34.35:0,34,1078	0/0:12,0:12:24.08:0,24,904	0/0:13,0:13:33.11:0,33,1316	0/0:33,0:33:45.15:0,45,1778	1/1:22,7:29:18:207,18,0	0/0:21,0:21:51.16:0,51,2002	0/0:35,0:36:78.25:0,78,2900	0/0:20,0:20:45.15:0,45,1769	0/0:17,0:29:57.20:0,57,1891	0/0:24,0:24:48.16:0,48,1937	0/0:19,0:19:48.16:0,48,1929	0/0:23,0:23:36.12:0,36,1492	0/0:22,0:22:48.16:0,48,1924	0/0:32,0:32:69.24:0,69,2762	0/0:16,0:16:30.10:0,30,1243	1/1:17,9:25:33.06:838,33,0	1/1:8,12:20:20.90:409,21,0	0/1:24,3:26:0:0,0,0	0/0:23,0:23:45.15:0,45,1770	0/0:12,0:12:21.06:0,21,771	0/0:30,0:30:63.22:0,63,2398	0/0:5,0:13:24.08:0,24,838	0/0:22,0:22:54.18:0,54,2069	1/1:3,15:16:29.20:761,29,0	0/0:7,0:7:21.07:0,21,835
chr10	107762368	.	G	GTAGA	1548.58	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.324;DP=655;FS=0.000;HRun=0;HaplotypeScore=130.2103;InbreedingCoeff=0.9707;MQ=59.17;MQ0=3;MQRankSum=-0.415;QD=33.66;ReadPosRankSum=2.412;VQSLOD=3.7770;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,105,1599	1/1:2,7:10:15.05:374,15,0	0/0:27,0:23:43.63:0,44,603	0/0:33,0:26:24.90:0,25,397	0/0:22,0:22:60.17:0,60,937	0/0:17,0:17:42.13:0,42,686	0/0:25,0:25:60.20:0,60,990	0/0:27,0:27:54.12:0,54,730	0/0:26,0:26:66.12:0,66,958	0/0:32,0:32:11.95:0,12,1249	0/0:23,0:23:60.18:0,60,956	1/1:12,23:36:57.53:1293,58,0	0/0:25,0:25:60.18:0,60,966	0/0:27,0:27:60.19:0,60,964	0/0:14,0:14:39.12:0,39,632	0/0:28,0:28:63.19:0,63,1009	0/0:23,0:23:54.17:0,54,860	0/0:12,0:12:33.10:0,33,523	0/0:19,0:19:39.08:0,39,543	0/0:21,0:21:39.13:0,39,658	0/0:27,0:27:51.13:0,51,772	0/0:25,0:25:62.45:0,62,957	0/0:12,0:12:18.06:0,18,293	0/0:26,0:26:60.15:0,60,915	0/0:20,0:20:51.16:0,51,833	0/0:25,0:25:57.10:0,57,924	0/0:17,0:17:39.06:0,39,601	0/0:14,0:14:42.14:0,42,691
chr10	107762832	.	G	GA	912.87	PASS	AB=0.685;AC=8;AF=0.143;AN=56;BaseQRankSum=6.426;DP=507;FS=3.667;HRun=11;HaplotypeScore=64.9552;InbreedingCoeff=0.4719;MQ=57.81;MQ0=7;MQRankSum=-2.189;QD=9.82;ReadPosRankSum=-3.295;VQSLOD=2.1723;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:84.61:0,85,645	0/1:2,0:9:4.41:4,0,7	0/0:8,0:5:11.88:0,12,87	0/0:10,0:7:0.70:0,1,112	0/0:13,0:13:20.87:0,21,162	0/0:16,0:16:16.31:0,16,185	0/0:22,0:23:43.06:0,43,312	1/1:9,9:18:29.64:278,30,0	0/0:16,0:16:35.81:0,36,278	0/0:16,0:16:35.81:0,36,277	0/0:17,0:17:31.91:0,32,237	0/0:4,0:9:6.53:0,7,38	0/0:10,0:10:23.89:0,24,183	0/0:18,1:19:13.30:0,13,267	0/0:22,1:24:22.15:0,22,336	0/0:13,0:13:25.91:0,26,191	0/0:43,0:45:99:0,112,840	0/0:30,0:30:80.64:0,81,622	0/1:6,8:13:19.62:159,0,20	0/1:2,7:9:1.31:160,0,1	0/1:4,17:21:36.18:211,0,36	0/0:21,0:21:35.82:0,36,276	0/0:13,0:12:26.89:0,27,209	0/0:26,0:26:62.75:0,63,486	0/0:13,0:14:31.90:0,32,238	0/0:17,0:17:32.85:0,33,255	1/1:3,18:21:24.04:244,24,0	0/0:7,0:5:11.92:0,12,88
chr10	107762847	.	TAAC	T	632.50	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.685;DP=495;FS=2.098;HRun=0;HaplotypeScore=83.1577;InbreedingCoeff=0.9458;MQ=66.84;MQ0=3;MQRankSum=-4.935;QD=35.14;ReadPosRankSum=-0.188;VQSLOD=3.9914;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,105,2404	1/1:0,12:12:30.10:529,30,0	0/0:12,0:9:27.01:0,27,513	0/0:15,0:12:33.85:0,34,648	0/0:12,0:12:33.09:0,33,728	0/0:14,0:14:42.14:0,42,997	0/0:26,0:26:66.23:0,66,1529	0/0:21,0:21:8.59:0,9,526	0/0:16,0:16:45.15:0,45,1006	0/0:17,0:17:51.16:0,51,1203	0/0:15,0:15:36.12:0,36,813	1/1:0,6:6:12.04:220,12,0	0/0:10,0:10:30.10:0,30,720	0/0:17,0:17:51.14:0,51,1167	0/0:20,0:20:60.21:0,60,1389	0/0:13,0:13:39.10:0,39,848	0/0:39,0:39:99:0,114,2621	0/0:29,0:29:87.30:0,87,2062	0/0:16,0:14:30.02:0,30,357	0/0:13,0:13:33.01:0,33,376	0/0:26,0:26:59.77:0,60,710	0/0:15,0:15:36.12:0,36,856	0/0:14,0:13:39.13:0,39,948	0/0:23,0:23:66.16:0,66,1441	0/0:14,0:14:39.12:0,39,901	0/0:17,0:17:48.15:0,48,1073	0/0:16,0:16:26.72:0,27,356	0/0:6,0:6:18.06:0,18,418
chr10	107763048	.	AAGAGGG	A	337.13	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=5.117;DP=476;FS=2.308;HRun=0;HaplotypeScore=104.5952;InbreedingCoeff=0.5740;MQ=60.23;MQ0=8;MQRankSum=-0.981;QD=8.03;ReadPosRankSum=-0.015;VQSLOD=2.2063;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:63.06:0,63,1570	0/0:4,0:3:6.01:0,6,84	0/0:25,0:11:20.84:0,21,245	0/1:29,0:8:6.69:7,0,111	1/1:1,12:13:29.91:430,30,0	0/0:12,0:12:33.05:0,33,854	0/0:21,0:21:54.01:0,54,1089	0/0:23,0:20:20.98:0,21,434	0/0:16,0:15:39.11:0,39,1205	0/0:22,0:22:57.16:0,57,1367	0/0:14,0:14:38.98:0,39,834	0/0:11,0:11:9.10:0,9,87	0/0:9,0:9:27.09:0,27,834	0/0:13,0:13:39.07:0,39,1019	0/0:19,0:19:56.88:0,57,1510	0/0:23,0:23:69.16:0,69,1707	0/0:16,0:16:33.08:0,33,698	0/0:17,0:15:35.97:0,36,903	0/0:21,0:20:37.25:0,37,287	0/0:7,0:6:12.50:0,13,175	0/0:11,0:10:14.43:0,14,118	0/0:25,0:25:75.05:0,75,1879	0/0:20,0:20:56.96:0,57,1300	0/0:20,0:20:57.04:0,57,1349	0/0:15,0:15:42.09:0,42,1139	0/0:13,0:13:33.07:0,33,672	0/0:20,0:20:9.94:0,10,326	0/0:12,0:12:32.28:0,32,1015
chr10	107763073	.	A	AGAG	913.08	PASS	AB=0.896;AC=9;AF=0.167;AN=54;BaseQRankSum=7.989;DP=444;FS=0.741;HRun=0;HaplotypeScore=69.9909;InbreedingCoeff=0.3542;MQ=45.89;MQ0=31;MQRankSum=-2.173;QD=9.13;ReadPosRankSum=-1.336;VQSLOD=2.6966;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:25:54.94:0,55,810	./.	0/0:14,0:2:6:0,6,74	0/0:11,0:4:12:0,12,173	0/0:12,0:10:1.96:0,2,98	0/0:10,0:10:24.08:0,24,406	0/0:17,0:17:35.83:0,36,573	0/1:30,0:31:84.82:85,0,172	0/0:14,0:13:36.12:0,36,598	0/0:20,0:18:50.25:0,50,787	0/0:10,0:10:24.07:0,24,376	1/1:4,7:10:0.71:150,1,0	0/0:15,0:12:30.01:0,30,511	0/0:13,0:13:29.75:0,30,433	0/0:20,0:20:48.08:0,48,809	0/0:23,0:23:57.41:0,57,835	0/0:12,0:11:23.11:0,23,350	0/0:16,0:14:30.01:0,30,474	0/1:15,0:12:92.06:185,0,92	1/1:7,1:5:2.85:56,3,0	0/1:6,4:7:17.31:47,0,17	0/0:21,0:19:54.18:0,54,914	0/0:17,0:17:48.10:0,48,781	0/0:22,0:19:42.10:0,42,678	0/0:16,0:16:45.12:0,45,679	0/0:9,0:9:27.09:0,27,438	1/1:16,0:16:5.04:519,5,0	0/0:20,0:12:28.72:0,29,463
chr10	107763079	.	AGAG	A	791.85	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=7.182;DP=449;FS=4.605;HRun=0;HaplotypeScore=66.7440;InbreedingCoeff=0.8501;MQ=44.44;MQ0=47;MQRankSum=-5.387;QD=7.92;ReadPosRankSum=-2.956;VQSLOD=0.9971;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:24:49.29:0,49,355	./.	0/0:12,0:2:3:0,3,26	0/0:8,0:3:9.02:0,9,95	0/0:11,0:9:14.30:0,14,75	0/0:11,0:11:17.30:0,17,173	0/0:18,0:18:35.30:0,35,271	1/1:34,3:31:14.48:338,14,0	0/0:14,0:13:32.85:0,33,262	0/0:22,0:18:41.46:0,41,354	0/0:11,0:9:20.62:0,21,134	1/1:12,0:9:14.76:94,15,0	0/0:17,0:12:29.93:0,30,243	0/0:13,0:13:29.80:0,30,230	0/0:21,0:20:50.70:0,51,414	0/0:24,0:22:55.72:0,56,415	0/0:15,0:10:4:0,4,150	0/0:16,0:13:29.78:0,30,227	1/1:6,10:13:29.40:194,29,0	1/1:9,0:5:2.92:17,3,0	1/1:11,0:7:5.75:32,6,0	0/0:20,0:18:50.50:0,50,408	0/0:18,0:17:47.56:0,48,364	0/0:22,0:19:50.38:0,50,366	0/0:14,0:14:36.72:0,37,290	0/0:10,0:9:23.89:0,24,199	1/1:15,0:14:41.56:287,42,0	0/0:19,0:11:29.33:0,29,213
chr10	107764223	.	TAC	T	6126.30	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.612;DP=795;FS=5.165;HRun=0;HaplotypeScore=116.6566;InbreedingCoeff=0.9796;MQ=50.77;MQ0=20;MQRankSum=-0.704;QD=26.52;ReadPosRankSum=1.990;VQSLOD=6.1834;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:63.28:0,63,1093	1/1:0,4:4:6.02:78,6,0	0/0:46,1:15:30.98:0,31,475	0/0:48,1:16:26.45:0,26,455	0/0:27,0:27:54.18:0,54,893	0/0:24,0:23:54.17:0,54,880	0/0:18,0:18:45.15:0,45,750	1/1:33,14:41:45.46:987,45,0	0/0:20,0:20:48.16:0,48,798	0/0:42,0:42:99:0,105,1759	0/0:21,0:21:35.82:0,36,611	1/1:4,21:25:60.57:743,61,0	0/0:15,0:15:33.11:0,33,559	0/0:22,0:22:54.18:0,54,900	0/0:18,0:18:48.15:0,48,772	0/0:22,0:22:60.17:0,60,958	0/0:28,0:28:63.21:0,63,1052	0/0:31,0:30:75.21:0,75,1301	1/1:10,20:23:60.19:780,60,0	1/1:7,19:24:63.20:815,63,0	1/1:9,50:59:99:1556,120,0	0/0:26,0:26:54.16:0,54,884	0/0:16,0:16:39.13:0,39,649	0/0:36,0:36:87.28:0,87,1428	0/0:20,1:21:20.69:0,21,775	0/0:32,0:31:81.24:0,81,1330	1/1:2,38:39:90.29:1168,90,0	0/0:14,0:14:36.12:0,36,571
chr10	107764298	.	T	TG	3103.67	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.587;DP=555;FS=25.342;HRun=1;HaplotypeScore=79.6665;InbreedingCoeff=0.9798;MQ=66.99;MQ0=0;MQRankSum=-2.000;QD=22.33;ReadPosRankSum=-1.166;VQSLOD=2.1112;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.20:0,90,1103	1/1:2,0:2:6.01:57,6,0	0/0:16,0:14:32.97:0,33,351	0/0:13,0:12:22.63:0,23,249	0/0:19,0:19:48.47:0,48,617	0/0:24,0:23:66.20:0,66,827	0/0:16,0:16:48.05:0,48,532	1/1:32,0:31:87.03:809,87,0	0/0:18,0:18:46.32:0,46,604	0/0:24,0:24:57.09:0,57,630	0/0:19,0:19:56.98:0,57,629	1/1:15,0:15:45.01:430,45,0	0/0:13,0:13:38.87:0,39,427	0/0:18,0:18:51.10:0,51,579	0/0:19,0:19:51.72:0,52,680	0/0:16,0:16:48.12:0,48,560	0/0:20,0:20:52.23:0,52,654	0/0:21,0:21:55.87:0,56,596	1/1:23,1:26:42.38:546,42,0	1/1:16,1:17:44.84:370,45,0	1/1:19,0:19:34.79:378,35,0	0/0:25,0:25:66.04:0,66,724	0/0:17,0:17:48.07:0,48,566	0/0:28,0:28:84.14:0,84,964	0/0:20,0:19:60.05:0,60,688	0/0:19,0:19:50.51:0,51,552	1/1:25,3:26:76.79:709,77,0	0/0:16,0:16:25.55:0,26,488
chr10	107765828	.	AAAAT	A	460.80	PASS	AC=8;AF=0.190;AN=42;BaseQRankSum=5.249;DP=271;FS=2.626;HRun=0;HaplotypeScore=38.3653;InbreedingCoeff=0.5656;MQ=63.61;MQ0=13;MQRankSum=-0.637;QD=10.47;ReadPosRankSum=0.455;VQSLOD=1.9549;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:12.04:0,12,280	0/0:5,0:5:6.02:0,6,105	./.	./.	0/0:11,0:10:9.03:0,9,210	0/0:10,0:10:15.05:0,15,350	./.	0/0:27,0:25:0:0,0,0	0/0:4,0:4:6.02:0,6,140	./.	0/0:9,0:9:3.01:0,3,70	1/1:8,0:8:12.04:149,12,0	./.	0/0:3,0:3:3.01:0,3,70	./.	0/0:5,0:5:3.01:0,3,70	0/0:24,0:24:27.09:0,27,631	0/0:14,0:14:18.06:0,18,420	1/1:14,6:20:18.04:254,18,0	1/1:7,1:8:3.01:46,3,0	./.	0/0:10,0:10:3.01:0,3,70	0/0:8,0:7:6.02:0,6,138	0/0:4,0:4:3.01:0,3,70	0/0:9,0:9:12.04:0,12,280	0/0:12,0:12:9.03:0,9,206	1/1:5,3:8:9.03:138,9,0	0/0:13,0:13:12.04:0,12,280
chr10	107766203	.	ACACACATATACT	A	49.14	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.815;DP=1227;FS=1.947;HRun=0;HaplotypeScore=413.6163;InbreedingCoeff=0.8632;MQ=59.07;MQ0=3;MQRankSum=-3.694;QD=4.91;ReadPosRankSum=-2.822;VQSLOD=0.7327;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,105,4750	1/1:2,8:10:5.15:129,5,0	0/0:55,0:33:57.17:0,57,2045	0/0:35,0:23:44.97:0,45,1326	0/0:31,0:31:84.29:0,84,3840	0/0:36,0:36:99:0,102,5017	0/0:43,0:43:96.06:0,96,4304	0/0:50,0:50:93.31:0,93,3443	0/0:51,0:51:99:0,120,5714	0/0:69,0:69:99:0,172,8333	0/0:29,0:29:69.22:0,69,3187	0/0:47,0:47:99:0,117,5869	0/0:50,0:50:99:0,135,5952	0/0:53,0:53:99:0,144,7103	0/0:72,0:72:99:0,193,9483	0/0:62,0:61:99:0,160,7886	0/0:32,0:32:69.66:0,70,2636	0/0:26,0:26:65.25:0,65,2426	0/0:22,0:22:54.18:0,54,2109	0/0:26,0:26:39.13:0,39,1804	0/0:103,0:103:99:0,251,12647	0/0:51,0:51:99:0,129,5847	0/0:37,0:37:99:0,108,4913	0/0:48,0:49:99:0,112,5442	0/0:17,0:17:45.15:0,45,2122	0/0:56,0:56:99:0,141,6334	0/0:38,0:38:99:0,99,4879	0/0:27,0:27:54.15:0,54,2728
chr10	107766525	.	A	AT	2013.26	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=15.515;DP=1159;FS=2.176;HRun=2;HaplotypeScore=184.7025;InbreedingCoeff=0.9803;MQ=58.28;MQ0=2;MQRankSum=-6.024;QD=9.68;ReadPosRankSum=-4.825;VQSLOD=-0.2419;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:55:99:0,144,1757	0/0:17,0:17:48.15:0,48,595	0/0:41,0:32:90.18:0,90,1054	0/0:52,0:48:89.43:0,89,1464	0/0:24,0:24:63.20:0,63,781	0/0:22,0:22:66.21:0,66,818	0/0:34,0:34:95.31:0,95,1145	1/1:53,0:53:88.28:905,88,0	0/0:65,0:66:99:0,181,2205	0/0:61,0:61:99:0,169,2083	0/0:27,0:27:81.25:0,81,1004	0/0:52,0:52:99:0,144,1772	0/0:39,0:39:99:0,117,1432	0/0:39,0:39:99:0,114,1413	0/0:54,0:54:99:0,156,1933	0/0:53,0:52:99:0,150,1860	0/0:33,0:33:89.77:0,90,1074	0/0:29,0:30:79.68:0,80,973	1/1:26,0:27:45:365,45,0	1/1:41,0:41:37.69:285,38,0	1/1:48,7:57:63.42:572,63,0	0/0:49,0:49:99:0,144,1774	0/0:40,0:40:99:0,114,1413	0/0:47,0:47:99:0,124,1525	0/0:25,0:25:72.23:0,72,893	0/0:64,0:64:99:0,190,2342	1/1:29,0:29:7.22:58,7,0	0/0:26,0:26:65.27:0,65,835
chr10	107766526	.	TTCACACA	T	9818.39	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.338;DP=1170;FS=3.155;HRun=0;HaplotypeScore=290.9314;InbreedingCoeff=1.0000;MQ=58.32;MQ0=2;MQRankSum=-7.778;QD=47.66;ReadPosRankSum=-4.708;VQSLOD=3.6917;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:55:99:0,152,5264	0/0:17,0:17:48.16:0,48,1079	0/0:42,0:32:90.07:0,90,1696	0/0:52,0:48:99:0,100,2885	0/0:25,0:25:66.23:0,66,2132	0/0:22,0:22:66.22:0,66,2087	0/0:34,0:34:92.02:0,92,3213	1/1:1,52:53:99:3433,141,0	0/0:67,0:67:99:0,193,6227	0/0:62,0:62:99:0,181,5665	0/0:27,0:27:81.28:0,81,2826	0/0:53,0:53:99:0,154,5168	0/0:39,0:39:99:0,117,4019	0/0:41,0:41:99:0,123,3883	0/0:54,0:54:99:0,163,5594	0/0:56,0:55:99:0,163,5577	0/0:33,0:33:93.30:0,93,2959	0/0:30,0:30:87.30:0,87,2988	1/1:2,25:27:78.05:1794,78,0	1/1:0,41:41:77.93:1536,78,0	1/1:41,15:56:50.63:1801,51,0	0/0:50,0:50:99:0,148,4775	0/0:40,0:40:99:0,114,3432	0/0:47,0:47:99:0,129,4238	0/0:25,0:25:72.25:0,72,2615	0/0:64,0:64:99:0,193,6196	1/1:2,27:29:48.16:1254,48,0	0/0:29,0:29:83.96:0,84,2961
chr10	107766527	.	T	TTCA	6419.84	PASS	AB=0.983;AC=8;AF=0.143;AN=56;BaseQRankSum=13.469;DP=1165;FS=0.735;HRun=0;HaplotypeScore=215.3093;InbreedingCoeff=0.7215;MQ=58.17;MQ0=2;MQRankSum=-7.935;QD=31.32;ReadPosRankSum=-5.988;VQSLOD=3.2521;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:57:99:0,150,2703	0/0:16,0:16:48.16:0,48,854	0/0:40,0:30:90.06:0,90,1446	0/0:53,0:48:95.40:0,95,2053	0/0:25,0:25:66.21:0,66,1180	0/0:22,0:22:66.22:0,66,1189	0/0:36,0:36:98.37:0,98,1739	1/1:53,0:53:99:2666,100,0	0/0:67,0:67:99:0,192,3343	0/0:61,0:61:99:0,178,3143	0/0:27,0:27:81.28:0,81,1472	0/0:52,0:52:99:0,154,2785	0/0:39,0:39:99:0,117,2139	0/0:41,0:41:99:0,123,2174	0/0:54,0:54:99:0,162,2911	0/0:55,0:54:99:0,162,2890	0/0:33,0:33:75.32:0,75,1530	0/0:31,0:31:86.39:0,86,1502	1/1:26,0:27:22.21:1117,22,0	0/1:41,0:41:10.54:748,0,11	1/1:30,26:56:81.10:1608,81,0	0/0:49,0:49:99:0,147,2649	0/0:39,0:39:99:0,114,2030	0/0:46,0:46:86.71:0,87,2212	0/0:24,0:24:72.25:0,72,1342	0/0:64,0:64:99:0,193,3387	0/1:27,0:28:53.79:282,0,54	0/0:29,0:29:69.42:0,69,1338
chr10	107768122	.	GAGACAGAC	G	2276.78	PASS	AB=0.630;AC=13;AF=0.232;AN=56;BaseQRankSum=9.711;DP=828;FS=18.718;HRun=0;HaplotypeScore=223.1418;InbreedingCoeff=0.8108;MQ=59.63;MQ0=6;MQRankSum=-5.291;QD=11.98;ReadPosRankSum=-2.292;VQSLOD=1.1763;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:78,0:79:99:0,138,6193	0/1:7,0:17:46.42:46,0,191	0/0:30,0:18:9.02:0,9,272	0/0:43,0:26:18.06:0,18,425	0/0:30,0:30:50.98:0,51,2017	0/0:18,0:19:42.13:0,42,1459	0/0:32,0:32:51.95:0,52,1987	1/1:16,18:34:53.96:755,54,0	0/0:32,0:34:75.23:0,75,2900	0/0:28,0:28:63.22:0,63,2304	0/0:19,0:19:39.13:0,39,1447	1/1:12,15:27:21.79:379,22,0	0/0:26,0:26:48.16:0,48,1912	0/0:25,0:25:48.15:0,48,1890	0/0:36,0:36:75.26:0,75,2645	0/0:26,0:26:63.22:0,63,2408	0/0:37,0:38:78.25:0,78,2890	0/0:27,0:27:60.21:0,60,2281	1/1:13,6:19:18.04:374,18,0	1/1:8,10:19:3.01:52,3,0	1/1:26,16:42:2.68:11,3,0	0/0:24,0:24:48.16:0,48,1681	0/0:21,0:22:45.13:0,45,1495	0/0:44,0:44:99:0,103,3803	0/0:18,0:18:24.06:0,24,772	0/0:25,0:25:60.21:0,60,2283	1/1:8,24:31:33.11:835,33,0	0/0:13,0:13:38.49:0,38,1255
chr10	107770260	.	TCA	T	331.57	PASS	AB=0.823;AC=3;AF=0.054;AN=56;BaseQRankSum=7.118;DP=714;FS=19.225;HRun=0;HaplotypeScore=116.9333;InbreedingCoeff=-0.0565;MQ=72.52;MQ0=8;MQRankSum=-4.404;QD=6.77;ReadPosRankSum=-1.956;VQSLOD=1.1479;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.31:0,90,1720	0/1:8,0:7:16.98:17,0,93	0/0:60,0:40:78.66:0,79,1466	0/0:86,1:53:88.52:0,89,1615	0/0:21,0:21:63.20:0,63,1155	0/0:18,0:18:54.19:0,54,1032	0/0:26,0:26:78.25:0,78,1464	0/0:28,2:25:63.58:0,64,1229	0/0:26,0:26:75.25:0,75,1383	0/0:26,0:26:78.27:0,78,1494	0/0:28,0:28:81.28:0,81,1490	0/0:18,0:18:35.60:0,36,636	0/0:23,0:23:69.23:0,69,1267	0/0:23,0:23:63.22:0,63,1189	0/0:14,0:14:39.13:0,39,728	0/0:15,0:15:42.14:0,42,802	0/0:32,0:32:86.72:0,87,1541	0/0:24,0:24:68.04:0,68,1231	0/1:13,6:16:99:110,0,480	0/0:17,1:17:17.93:0,18,347	0/0:22,1:23:42.06:0,42,663	0/0:15,0:14:38.69:0,39,669	0/0:18,0:18:54.14:0,54,994	0/0:27,0:27:75.24:0,75,1375	0/0:24,0:24:63.20:0,63,1183	0/0:20,0:20:57.19:0,57,1063	0/1:13,9:22:99:304,0,167	0/0:16,0:16:48.16:0,48,925
chr10	107770279	.	G	GTCTCTGTCTCTCTCTCTC	5414.82	PASS	AB=0.750;AC=14;AF=0.250;AN=56;BaseQRankSum=9.414;DP=703;FS=2.247;HRun=0;HaplotypeScore=294.8509;InbreedingCoeff=0.7306;MQ=68.46;MQ0=15;MQRankSum=-7.093;QD=26.81;ReadPosRankSum=-4.748;VQSLOD=2.7258;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:87:0,87,3523	1/1:1,0:7:6.02:115,6,0	0/1:51,0:23:17.71:18,0,1099	0/0:78,0:41:39.89:0,40,1311	0/0:20,0:20:51.14:0,51,1996	0/0:21,0:21:57.18:0,57,2250	0/0:25,0:25:72.20:0,72,3134	1/1:36,0:31:54.30:1556,54,0	0/0:25,0:25:66.21:0,66,2867	0/0:24,0:23:46.23:0,46,2423	0/0:36,0:36:48.22:0,48,3648	0/1:0,0:16:9.11:9,0,247	0/0:21,0:21:57.56:0,58,2250	0/0:19,0:19:48.03:0,48,2001	0/0:15,0:15:39.05:0,39,1621	0/0:19,0:19:48.11:0,48,1498	0/0:27,0:27:27.97:0,28,2770	0/0:21,0:21:57.19:0,57,2575	1/1:19,0:17:45.15:1914,45,0	1/1:7,13:28:0.47:1,0,0	1/1:16,0:16:6:52,6,0	0/0:20,0:19:47.37:0,47,1453	0/0:17,0:17:39.10:0,39,1405	0/0:25,0:25:36.81:0,37,2772	0/0:22,0:22:47.91:0,48,1808	0/0:19,0:19:44.94:0,45,1917	1/1:15,0:27:35.79:1749,36,0	0/0:9,0:9:17.89:0,18,777
chr10	107770284	.	TCACA	T	575.52	PASS	AB=0.972;AC=10;AF=0.179;AN=56;BaseQRankSum=8.345;DP=656;FS=2.451;HRun=0;HaplotypeScore=130.2705;InbreedingCoeff=0.5568;MQ=65.72;MQ0=17;MQRankSum=-4.803;QD=5.14;ReadPosRankSum=-2.906;VQSLOD=1.8271;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:66.13:0,66,1373	0/0:10,0:9:3.01:0,3,50	0/0:45,0:18:6.02:0,6,122	0/0:69,0:37:2.54:0,3,167	0/0:20,0:20:32.85:0,33,684	0/0:21,0:21:45.15:0,45,1084	0/0:26,0:27:41.71:0,42,865	1/1:10,15:22:42.59:422,43,0	0/0:22,0:24:47.90:0,48,1074	0/0:26,0:25:51.16:0,51,1139	0/0:35,0:35:69.22:0,69,1585	0/0:15,0:15:18.53:0,19,299	0/0:19,0:21:50.89:0,51,1099	0/0:18,0:18:32.85:0,33,734	0/0:15,0:15:36.12:0,36,832	0/0:16,0:18:35.86:0,36,808	0/0:28,0:28:56.73:0,57,1040	0/0:20,0:21:47.60:0,48,947	1/1:15,0:12:10.48:135,10,0	1/1:21,0:20:3.01:38,3,0	0/1:12,0:12:13.98:20,0,14	0/0:20,0:19:47.80:0,48,1140	0/0:15,0:15:29.84:0,30,634	0/0:25,0:26:47.90:0,48,1016	0/0:17,0:21:41.61:0,42,873	0/1:16,1:17:18.68:19,0,563	1/1:22,0:22:1.78:88,2,0	0/0:7,0:6:18.06:0,18,437
chr10	107771580	.	C	CA	3802.84	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-12.028;DP=727;FS=3.393;HRun=7;HaplotypeScore=70.5073;InbreedingCoeff=0.9993;MQ=76.40;MQ0=0;MQRankSum=-2.362;QD=28.17;ReadPosRankSum=-1.314;VQSLOD=3.9391;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,1072	0/0:13,0:13:30.04:0,30,290	0/0:31,0:31:35.65:0,36,497	0/0:20,0:19:41.98:0,42,388	0/0:20,0:20:60.10:0,60,579	0/0:23,0:23:66.10:0,66,634	0/0:23,0:23:66.11:0,66,637	1/1:3,25:28:75.21:893,75,0	0/0:28,0:28:78.09:0,78,741	0/0:38,0:37:99:0,111,1069	0/0:17,0:17:45.07:0,45,434	0/0:25,0:25:69.10:0,69,666	0/0:24,0:24:69.11:0,69,666	0/0:22,0:22:51.04:0,51,481	0/0:28,0:28:84.12:0,84,805	0/0:33,0:33:84.12:0,84,806	0/0:27,0:27:81.12:0,81,777	0/0:32,0:32:90.05:0,90,846	1/1:6,15:21:42.13:507,42,0	1/1:5,26:31:69.17:817,69,0	1/1:5,26:31:72.21:860,72,0	0/0:35,0:35:99:0,105,1013	0/0:19,0:19:57.09:0,57,550	0/0:34,0:34:87.13:0,87,840	0/0:18,0:18:48.07:0,48,463	0/0:33,0:33:93.15:0,93,898	1/1:1,23:24:60.18:725,60,0	0/0:9,0:9:24.04:0,24,232
chr10	107771684	.	CTG	C	854	PASS	AB=0.894;AC=25;AF=0.446;AN=56;BaseQRankSum=10.338;DP=820;FS=7.713;HRun=0;HaplotypeScore=127.8214;InbreedingCoeff=-0.0876;MQ=60.19;MQ0=6;MQRankSum=-0.844;QD=1.43;ReadPosRankSum=1.093;VQSLOD=1.6504;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,2:38:0.56:0,1,868	0/0:6,0:10:6:0,6,52	0/1:16,0:8:5.04:5,0,44	0/0:27,0:17:8.95:0,9,71	0/1:16,1:17:7.23:7,0,340	0/1:22,4:25:26.51:27,0,512	0/1:26,6:32:51.83:52,0,573	1/1:21,0:26:16.58:79,17,0	0/1:37,7:44:72.32:72,0,1126	0/1:47,2:49:1.69:2,0,778	0/1:13,3:16:41.55:42,0,297	0/0:19,0:43:22.27:0,22,201	0/1:25,5:30:80.12:80,0,589	0/0:36,0:37:52.04:0,52,909	0/1:40,5:47:61.65:62,0,811	0/0:28,0:31:31.87:0,32,777	0/1:39,5:45:50.04:50,0,1028	0/0:20,2:20:9.60:0,10,525	1/1:24,1:22:8.28:39,8,0	1/1:5,0:13:12.71:55,13,0	1/1:42,1:61:28.04:153,28,0	0/1:18,3:22:77.94:78,0,377	0/0:13,0:14:24.05:0,24,328	0/1:34,3:39:3.75:4,0,1146	0/1:25,2:28:39.15:39,0,644	0/1:23,2:26:34.09:34,0,508	1/1:10,1:19:22.64:112,23,0	0/1:11,3:14:35.61:36,0,310
chr10	107771739	.	ATG	A	4111.17	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.148;DP=1004;FS=1.699;HRun=0;HaplotypeScore=185.4769;InbreedingCoeff=0.9896;MQ=54.85;MQ0=13;MQRankSum=-0.661;QD=21.08;ReadPosRankSum=-0.832;VQSLOD=3.9417;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,135,2226	0/0:8,0:8:18.06:0,18,306	0/0:46,0:17:27.07:0,27,415	0/0:53,0:26:44.46:0,44,646	0/0:15,0:15:45.14:0,45,738	0/0:26,0:26:53.85:0,54,874	0/0:45,0:45:99:0,117,1916	1/1:7,43:50:99:1502,117,0	0/0:52,0:52:99:0,135,2223	0/0:46,0:46:99:0,129,2117	0/0:21,0:21:57.19:0,57,965	0/0:42,0:42:57.12:0,57,955	0/0:30,0:29:81.25:0,81,1324	0/0:37,0:37:99:0,99,1679	0/0:44,0:44:99:0,114,1932	0/0:38,0:38:99:0,105,1732	0/0:41,0:41:99:0,111,1851	0/0:29,0:29:71.12:0,71,1046	1/1:8,16:21:48.16:623,48,0	1/1:2,11:13:12.04:156,12,0	1/1:28,71:97:99:1562,124,0	0/0:32,0:32:90.04:0,90,1487	0/0:12,0:12:30.10:0,30,499	0/0:49,0:49:99:0,126,2055	0/0:31,0:31:87.27:0,87,1420	0/0:40,0:40:99:0,111,1848	1/1:1,8:9:21.07:268,21,0	0/0:19,0:19:54.17:0,54,882
chr10	107771824	.	C	CGT	6511.73	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.757;DP=1196;FS=18.521;HRun=0;HaplotypeScore=210.4537;InbreedingCoeff=0.9999;MQ=55.71;MQ0=13;MQRankSum=-0.637;QD=27.25;ReadPosRankSum=-0.549;VQSLOD=3.9257;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:68,0:68:99:0,178,2339	0/0:14,0:14:33.09:0,33,439	0/0:59,0:24:54.53:0,55,637	0/0:66,0:30:66.04:0,66,802	0/0:24,0:24:69.21:0,69,903	0/0:17,0:17:51.17:0,51,679	0/0:44,0:44:99:0,114,1518	1/1:6,39:44:65.08:1472,65,0	0/0:49,0:49:99:0,126,1639	0/0:47,0:47:99:0,120,1546	0/0:14,0:14:42.14:0,42,559	0/0:53,0:53:99:0,102,1349	0/0:51,0:51:99:0,141,1856	0/0:69,0:69:99:0,181,2395	0/0:65,0:65:99:0,175,2299	0/0:50,0:49:99:0,132,1726	0/0:43,0:43:99:0,108,1400	0/0:33,0:33:96.29:0,96,1260	1/1:13,16:28:57.16:907,57,0	1/1:2,25:27:42.14:727,42,0	1/1:32,86:117:99:2669,149,0	0/0:35,0:35:87.29:0,87,1157	0/0:15,0:15:36.12:0,36,479	0/0:56,0:56:99:0,156,2055	0/0:26,0:26:66.22:0,66,879	0/0:40,0:39:99:0,108,1438	1/1:2,18:19:44.82:737,45,0	0/0:18,0:18:48.14:0,48,622
chr10	107771869	.	T	TTG	4194.54	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=5.826;DP=1218;FS=14.248;HRun=0;HaplotypeScore=225.7667;InbreedingCoeff=0.8833;MQ=56.56;MQ0=15;MQRankSum=4.432;QD=14.08;ReadPosRankSum=-0.240;VQSLOD=2.2713;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,172,2271	1/1:0,18:18:48.16:831,48,0	0/0:65,0:28:53.14:0,53,666	0/0:62,0:34:62.70:0,63,746	0/0:25,0:25:60.20:0,60,795	0/0:24,0:24:63.05:0,63,837	0/0:49,0:49:99:0,138,1771	1/1:46,1:42:23.77:318,24,0	0/0:51,0:51:99:0,133,1726	0/0:47,0:46:99:0,102,1358	0/0:14,0:14:42.14:0,42,559	1/1:4,52:54:99:2282,132,0	0/0:51,0:51:99:0,144,1897	0/0:52,0:52:99:0,132,1736	0/0:63,0:63:99:0,162,2125	0/0:52,0:51:99:0,135,1777	0/0:49,0:49:99:0,130,1736	0/0:50,0:50:99:0,141,1836	1/1:23,0:22:23.12:214,23,0	1/1:25,0:25:5:75,5,0	1/1:110,0:109:41.88:432,42,0	0/0:40,0:40:99:0,117,1552	0/0:19,0:19:51.15:0,51,663	0/0:61,0:61:99:0,168,2196	0/0:28,0:28:84.26:0,84,1103	0/0:36,0:35:75.25:0,75,998	0/1:19,0:18:9.85:43,0,10	0/0:22,0:22:51.17:0,51,678
chr10	107771964	.	C	CGT	7495.12	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-5.489;DP=1229;FS=0.320;HRun=0;HaplotypeScore=180.0646;InbreedingCoeff=0.9997;MQ=62.07;MQ0=10;MQRankSum=-0.502;QD=29.98;ReadPosRankSum=-0.720;VQSLOD=5.8360;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:60:99:0,152,1898	0/0:14,0:14:27.09:0,27,347	0/0:45,0:24:51.09:0,51,591	0/0:48,0:21:44.90:0,45,547	0/0:30,0:30:72.21:0,72,899	0/0:27,0:27:63.19:0,63,797	0/0:50,0:50:99:0,111,1389	1/1:8,29:38:90.25:1444,90,0	0/0:41,0:41:99:0,105,1333	0/0:68,0:68:99:0,178,2251	0/0:26,0:26:63.20:0,63,808	0/0:48,0:48:99:0,126,1605	0/0:48,0:48:99:0,132,1697	0/0:48,0:48:99:0,132,1683	0/0:60,0:60:99:0,163,2070	0/0:60,0:60:99:0,165,2078	0/0:38,0:38:81.25:0,81,1028	0/0:33,0:33:69.21:0,69,876	1/1:8,18:26:54.16:861,54,0	1/1:6,29:35:39.68:1226,40,0	1/1:24,100:124:99:3262,177,0	0/0:38,0:38:87.28:0,87,1119	0/0:31,0:31:75.24:0,75,964	0/0:64,0:61:99:0,163,2084	0/0:27,0:27:75.20:0,75,946	0/0:51,0:51:99:0,129,1647	1/1:7,17:27:42.14:702,42,0	0/0:23,0:23:60.18:0,60,759
chr10	107774259	.	AT	A	2312.34	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=11.254;DP=376;FS=10.580;HRun=8;HaplotypeScore=38.0489;InbreedingCoeff=0.9002;MQ=62.89;MQ0=2;MQRankSum=-1.778;QD=21.81;ReadPosRankSum=-2.701;VQSLOD=1.8970;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,1165	0/0:8,0:8:24.07:0,24,290	0/0:9,0:7:15.05:0,15,180	0/0:4,0:3:0.89:0,1,2	0/0:14,0:14:33.08:0,33,375	0/0:8,0:8:24.07:0,24,289	0/0:11,0:10:30.09:0,30,362	1/1:4,31:34:87:813,87,0	0/0:9,0:9:24.07:0,24,290	0/0:12,0:12:33.10:0,33,398	0/0:19,0:19:51.15:0,51,605	1/1:1,7:8:21.03:203,21,0	0/0:3,0:3:9.03:0,9,109	0/0:4,0:4:12.04:0,12,145	0/0:8,0:8:21.06:0,21,254	0/0:3,0:3:9.03:0,9,109	0/0:23,0:22:69.21:0,69,833	0/0:29,0:29:77.73:0,78,914	1/1:1,15:15:45.05:425,45,0	1/1:1,12:13:36.02:339,36,0	1/1:3,10:13:30.05:290,30,0	./.	0/0:10,0:10:27.08:0,27,326	0/0:2,0:2:3.01:0,3,36	0/0:15,0:15:42.13:0,42,507	0/0:22,0:22:60.18:0,60,725	1/1:4,17:20:44.97:424,45,0	0/0:21,0:21:63.19:0,63,760
chr10	107775700	.	C	CACACACACACACATACACAC	6161.70	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=10.262;DP=775;FS=3.518;HRun=0;HaplotypeScore=380.1473;InbreedingCoeff=0.8198;MQ=62.25;MQ0=5;MQRankSum=-11.038;QD=32.09;ReadPosRankSum=-5.761;VQSLOD=1.7081;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,110,5422	1/1:10,0:10:8.99:284,9,0	0/0:42,0:29:32.24:0,32,835	0/0:28,0:21:41.26:0,41,875	0/0:33,0:33:78.16:0,78,3371	0/0:25,0:25:51.16:0,51,2042	0/0:31,0:31:45.43:0,45,2369	1/1:44,0:41:92.07:1877,92,0	0/0:26,0:26:53.86:0,54,2217	0/0:26,0:26:71.25:0,71,2980	0/0:21,0:21:45.14:0,45,1922	0/1:29,0:29:99:864,0,138	0/0:12,0:12:30.08:0,30,1149	0/0:36,0:36:82.14:0,82,3802	0/0:29,0:29:78.25:0,78,3826	0/0:20,0:20:42.13:0,42,1833	0/0:33,0:33:57.89:0,58,3181	0/0:24,0:23:57.19:0,57,2630	1/1:26,0:26:57.18:1729,57,0	1/1:4,0:27:12.04:911,12,0	1/1:9,1:25:2.04:6,2,0	0/0:23,0:23:45.14:0,45,2040	0/0:30,0:30:87.26:0,87,3934	0/0:34,0:34:87.30:0,87,4016	0/0:24,0:24:63.20:0,63,3002	0/0:28,0:28:71.89:0,72,2664	1/1:1,0:31:6.46:490,6,0	0/0:6,0:6:18.06:0,18,701
chr10	107776295	.	GGT	G	7654.91	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.897;DP=694;FS=0.645;HRun=0;HaplotypeScore=83.2903;InbreedingCoeff=0.9996;MQ=80.82;MQ0=1;MQRankSum=-7.185;QD=35.11;ReadPosRankSum=-0.344;VQSLOD=6.7110;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,2227	1/1:1,10:11:27.09:371,27,0	0/0:18,0:18:45.13:0,45,751	0/0:17,0:17:48.16:0,48,815	0/0:21,0:21:63.22:0,63,1103	0/0:15,0:15:45.15:0,45,798	0/0:29,0:29:87.30:0,87,1520	1/1:2,18:20:51.17:701,51,0	0/0:26,0:26:69.22:0,69,1196	0/0:28,0:28:81.25:0,81,1406	0/0:9,0:9:27.09:0,27,474	1/1:5,23:28:78.26:1071,78,0	0/0:28,0:28:72.25:0,72,1258	0/0:26,0:26:78.27:0,78,1379	0/0:26,0:26:75.26:0,75,1330	0/0:23,0:23:66.23:0,66,1171	0/0:23,0:23:63.22:0,63,1118	0/0:28,0:28:75.26:0,75,1329	1/1:3,27:30:81.26:1096,81,0	1/1:3,26:29:78.21:1037,78,0	1/1:9,53:62:99:2061,150,0	0/0:15,0:15:42.14:0,42,745	0/0:20,0:20:54.18:0,54,954	0/0:30,0:30:87.30:0,87,1542	0/0:20,0:20:57.18:0,57,983	0/0:20,0:20:54.18:0,54,932	1/1:3,35:37:96.32:1319,96,0	0/0:11,0:11:33.11:0,33,586
chr10	107777370	.	T	TTGTCTC	810.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.881;DP=788;FS=6.577;HRun=0;HaplotypeScore=173.7401;InbreedingCoeff=0.9699;MQ=62.70;MQ0=0;MQRankSum=-4.531;QD=27.93;ReadPosRankSum=-3.019;VQSLOD=2.3915;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,114,2405	0/0:15,0:15:30.05:0,30,396	0/0:21,0:18:42.07:0,42,756	0/0:32,0:24:28.29:0,28,571	0/0:23,0:23:63.22:0,63,1361	0/0:17,0:17:39.03:0,39,772	0/0:26,0:26:54.19:0,54,1172	0/0:45,0:45:99:0,111,2225	0/0:23,0:23:69.23:0,69,1444	0/0:52,0:52:99:0,123,2638	0/0:20,0:20:48.15:0,48,953	1/1:3,26:29:27.09:904,27,0	0/0:20,0:20:60.14:0,60,1151	0/0:12,0:12:30.10:0,30,645	0/0:35,0:35:81.26:0,81,1671	0/0:34,0:34:75.24:0,75,1544	0/0:29,0:29:71.83:0,72,1432	0/0:19,0:19:12.44:0,12,931	0/0:17,0:17:45.14:0,45,923	0/0:37,0:37:99:0,99,2143	0/0:37,0:37:81.28:0,81,1750	0/0:30,0:30:78.27:0,78,1659	0/0:27,0:27:78.27:0,78,1642	0/0:31,0:31:75.14:0,75,1533	0/0:20,0:20:51.15:0,51,1045	0/0:27,0:27:66.23:0,66,1453	0/0:45,0:45:99:0,117,2470	0/0:17,0:17:45.15:0,45,949
chr10	107777374	.	CTCTG	C	474.64	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.746;DP=804;FS=0.000;HRun=0;HaplotypeScore=146.5691;InbreedingCoeff=0.9983;MQ=62.43;MQ0=0;MQRankSum=0.226;QD=31.64;ReadPosRankSum=1.273;VQSLOD=3.6399;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,126,3216	1/1:0,15:15:30.10:569,30,0	0/0:24,0:19:51.03:0,51,1186	0/0:33,0:25:39.69:0,40,867	0/0:25,0:25:72.23:0,72,1816	0/0:17,0:17:39.13:0,39,1028	0/0:26,0:26:66.11:0,66,1567	0/0:48,0:48:99:0,138,3397	0/0:24,0:24:72.25:0,72,1918	0/0:51,0:51:99:0,141,3589	0/0:18,0:18:51.18:0,51,1335	0/0:29,0:29:30.09:0,30,525	0/0:23,0:23:69.24:0,69,1685	0/0:12,0:12:30.10:0,30,809	0/0:33,0:33:96.28:0,96,2361	0/0:33,0:33:90.25:0,90,2145	0/0:30,0:30:81.26:0,81,2068	0/0:19,0:19:50.40:0,50,1230	0/0:21,0:20:57.19:0,57,1403	0/0:36,0:36:99:0,100,2647	0/0:37,0:37:96.28:0,96,2404	0/0:31,0:31:87.28:0,87,2262	0/0:27,0:27:81.28:0,81,2107	0/0:32,0:32:87.20:0,87,2219	0/0:19,0:19:57.16:0,57,1410	0/0:25,0:25:75.25:0,75,1937	0/0:49,0:49:99:0,129,3320	0/0:17,0:17:51.18:0,51,1352
chr10	107777486	.	GTCTGTCTCTGTCTGTC	G	3969.04	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=11.862;DP=913;FS=0.000;HRun=0;HaplotypeScore=371.1741;InbreedingCoeff=0.9583;MQ=69.77;MQ0=11;MQRankSum=-0.723;QD=30.77;ReadPosRankSum=-4.281;VQSLOD=0.9421;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:77.71:0,78,3321	0/0:13,0:13:36.12:0,36,1870	0/0:45,0:26:11:0,11,425	0/0:87,0:51:27.35:0,27,986	0/0:29,0:29:78.21:0,78,3954	0/0:29,0:29:66.21:0,66,4005	0/0:26,0:26:60.19:0,60,2494	1/1:13,33:46:96.26:1636,96,0	0/0:36,0:36:90.29:0,90,4680	0/0:36,0:36:69.24:0,69,2884	0/0:25,0:25:54.17:0,54,2138	0/0:24,0:24:37.80:0,38,1710	0/0:18,0:18:48.15:0,48,2167	0/0:21,0:21:51.16:0,51,2074	0/0:37,0:37:96.30:0,96,5168	0/0:30,0:30:81.25:0,81,4241	0/0:45,0:45:86.93:0,87,4800	0/0:35,0:35:87.24:0,87,4159	1/1:4,11:14:33.04:743,33,0	1/1:7,28:35:6.02:199,6,0	./.	0/0:31,0:31:81.25:0,81,3451	0/0:21,0:21:45.12:0,45,1796	0/0:51,0:50:99:0,121,5628	0/0:26,0:26:60.18:0,60,2259	0/0:31,0:31:60.20:0,60,2638	1/1:7,26:33:39.13:1392,39,0	0/0:10,0:10:24.07:0,24,1363
chr10	107778368	.	G	GA	3473.04	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.474;DP=713;FS=3.213;HRun=10;HaplotypeScore=75.9268;InbreedingCoeff=0.9594;MQ=76.52;MQ0=1;MQRankSum=-0.636;QD=21.31;ReadPosRankSum=-2.828;VQSLOD=3.5347;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,1:39:69.95:0,70,737	1/1:3,10:14:2.30:213,2,0	0/0:29,0:22:27.93:0,28,214	0/0:20,0:19:28.81:0,29,210	0/0:24,0:25:70.94:0,71,570	0/0:22,0:22:62.90:0,63,513	0/0:24,0:24:53.90:0,54,437	1/1:7,25:33:77.98:782,78,0	0/0:24,0:24:53.92:0,54,443	0/0:23,0:23:57.98:0,58,528	0/0:22,1:23:33.91:0,34,481	0/0:27,0:27:65.50:0,66,525	0/0:22,0:22:62.90:0,63,512	0/0:21,0:21:50.89:0,51,410	0/0:34,1:35:57.48:0,57,663	0/0:29,0:29:83.88:0,84,686	0/0:29,0:29:77.87:0,78,636	0/0:24,0:24:65.84:0,66,531	1/1:4,20:26:44.16:623,44,0	1/1:4,25:30:74.51:753,75,0	1/1:8,27:36:66:686,66,0	0/0:16,0:16:39.82:0,40,318	0/0:24,0:24:36.54:0,37,489	0/0:32,0:32:86.71:0,87,700	0/0:20,0:20:47.94:0,48,394	0/0:25,0:25:60.78:0,61,492	1/1:6,18:24:39.10:416,39,0	0/0:17,0:17:50.94:0,51,419
chr10	107778548	.	G	GA	1428.20	PASS	AB=0.814;AC=9;AF=0.161;AN=56;BaseQRankSum=3.332;DP=602;FS=0.475;HRun=11;HaplotypeScore=81.6927;InbreedingCoeff=0.5618;MQ=53.88;MQ0=7;MQRankSum=-10.372;QD=10.58;ReadPosRankSum=-2.644;VQSLOD=2.6270;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:50.06:0,50,532	0/0:7,0:7:8.49:0,8,68	0/1:8,2:6:15.57:16,0,75	0/0:10,0:7:17.83:0,18,116	0/0:33,2:36:15.76:0,16,470	0/0:18,0:22:56.90:0,57,410	0/0:22,0:23:43.80:0,44,328	0/1:26,13:39:28.79:392,0,29	0/0:11,0:11:14.93:0,15,116	0/0:33,0:33:64.45:0,64,493	0/0:19,1:20:32.85:0,33,255	0/0:18,0:19:11.49:0,11,163	0/0:15,0:15:29.77:0,30,226	0/0:8,0:8:14.66:0,15,100	0/0:21,0:22:52.83:0,53,400	0/0:24,0:25:64.79:0,65,493	0/0:33,1:36:54.22:0,54,581	0/0:28,1:29:32.21:0,32,429	1/1:15,9:24:35.91:349,36,0	1/1:7,17:23:50.90:469,51,0	0/1:11,2:11:31.92:38,0,32	0/0:21,1:23:13.45:0,13,277	0/0:26,0:26:59.74:0,60,464	0/0:16,0:16:35.86:0,36,279	0/0:16,2:18:11.38:0,11,271	0/0:23,1:22:20.36:0,20,338	1/1:8,14:19:15.68:322,16,0	0/0:11,0:10:26.89:0,27,209
chr10	107778567	.	A	AAAAAG	5812.23	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-3.558;DP=621;FS=1.417;HRun=0;HaplotypeScore=115.3233;InbreedingCoeff=0.9774;MQ=62.87;MQ0=2;MQRankSum=-5.039;QD=38.24;ReadPosRankSum=-3.936;VQSLOD=3.9660;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,1842	1/1:1,4:5:9.02:210,9,0	0/0:15,0:11:27.09:0,27,502	0/0:19,0:14:33.06:0,33,578	0/0:38,0:38:99:0,114,2198	0/0:22,0:22:57.19:0,57,1102	0/0:18,0:18:45.15:0,45,910	1/1:12,22:40:84.25:1661,84,0	0/0:8,0:8:24.08:0,24,445	0/0:36,0:36:93.22:0,93,1742	0/0:18,0:18:42.13:0,42,735	1/1:6,12:20:30.10:802,30,0	0/0:14,0:14:42.14:0,42,789	0/0:9,0:9:24.08:0,24,458	0/0:22,0:22:60.20:0,60,1155	0/0:27,0:27:69.22:0,69,1281	0/0:36,0:36:93.32:0,93,1797	0/0:25,0:25:66.23:0,66,1274	1/1:10,17:30:60.15:1164,60,0	1/1:13,9:21:36.12:942,36,0	1/1:2,10:13:9.03:273,9,0	0/0:19,0:19:57.18:0,57,1056	0/0:27,0:27:72.24:0,72,1318	0/0:20,0:20:48.16:0,48,852	0/0:20,0:19:60.20:0,60,1150	0/0:25,0:24:72.24:0,72,1408	1/1:14,8:19:30.10:761,30,0	0/0:14,0:14:39.13:0,39,730
chr10	107778996	.	C	CGT	708.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.983;DP=809;FS=2.992;HRun=0;HaplotypeScore=129.1685;InbreedingCoeff=0.7618;MQ=60.61;MQ0=10;MQRankSum=-2.129;QD=16.48;ReadPosRankSum=2.822;VQSLOD=4.0023;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:39:99:0,102,1229	0/0:12,0:12:27.09:0,27,343	0/0:35,0:15:2.96:0,3,112	0/0:39,0:13:5.88:0,6,45	0/0:24,0:24:42.13:0,42,531	0/0:23,0:23:48.08:0,48,577	0/0:31,0:31:72.21:0,72,900	0/0:23,0:23:57.17:0,57,711	0/0:35,0:35:87.27:0,87,1097	0/0:35,0:34:66.02:0,66,791	0/0:11,0:11:30.10:0,30,378	1/1:15,28:42:48.14:803,48,0	0/0:33,0:33:87.28:0,87,1095	0/0:23,0:25:71.84:0,72,819	0/0:32,0:32:63.20:0,63,799	0/0:33,0:32:69.20:0,69,862	0/0:34,0:33:69.64:0,70,1099	0/0:23,0:23:60.14:0,60,719	0/0:20,0:20:23.48:0,23,391	0/0:20,0:19:15.04:0,15,191	0/0:72,0:71:41.96:0,42,495	0/0:18,0:18:39.12:0,39,496	0/0:19,0:19:42.59:0,43,517	0/0:45,0:42:99:0,102,1257	0/0:21,0:21:45.11:0,45,554	0/0:26,0:26:50.52:0,51,618	0/0:16,0:16:20.63:0,21,210	0/0:22,0:22:43.35:0,43,635
chr10	107779028	.	T	TGCGCGC	1138.47	PASS	AB=0.829;AC=8;AF=0.143;AN=56;BaseQRankSum=-0.441;DP=774;FS=5.308;HRun=0;HaplotypeScore=175.9969;InbreedingCoeff=0.5112;MQ=52.39;MQ0=18;MQRankSum=-5.164;QD=12.24;ReadPosRankSum=-2.999;VQSLOD=2.1428;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:96.28:0,96,2003	1/1:11,0:11:9.02:102,9,0	0/0:8,0:2:2.88:0,3,15	0/0:6,0:1:0:0,0,0	0/0:16,0:15:39.09:0,39,726	0/0:32,0:32:69:0,69,1371	0/0:34,0:33:90.29:0,90,1975	0/1:28,0:27:99:474,0,252	0/0:30,0:30:80.65:0,81,1469	0/0:24,0:23:66.19:0,66,1359	0/0:15,0:14:36.11:0,36,752	0/0:39,0:38:53.37:0,53,967	0/0:29,0:29:72.23:0,72,1402	0/0:30,0:30:90.27:0,90,1950	0/0:28,0:28:75.42:0,75,1452	0/0:38,0:37:99:0,102,2236	0/0:42,0:41:78.64:0,79,2147	0/0:28,0:28:79.15:0,79,1735	0/1:12,9:21:99:484,0,130	1/1:7,8:17:0.94:1,1,0	0/0:25,27:68:9:0,9,94	0/0:26,0:26:66.19:0,66,1330	0/0:17,0:17:48.14:0,48,1010	0/0:53,0:50:99:0,129,2688	0/0:22,0:22:54.14:0,54,1068	0/0:26,0:24:72.23:0,72,1447	1/1:3,4:11:5.61:198,6,0	0/0:25,0:26:40.49:0,40,1432
chr10	107779030	.	TGC	T	149.94	PASS	AB=0.995;AC=9;AF=0.173;AN=52;BaseQRankSum=9.831;DP=742;FS=5.407;HRun=0;HaplotypeScore=117.4707;InbreedingCoeff=-0.0176;MQ=52.16;MQ0=18;MQRankSum=0.497;QD=0.62;ReadPosRankSum=0.597;VQSLOD=1.9562;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:37.15:0,37,1025	0/0:7,4:11:8.87:0,9,69	0/0:8,0:2:3.85:0,4,11	./.	0/0:16,0:15:29.57:0,30,391	0/1:30,0:30:9.41:9,0,632	0/0:35,0:34:21.28:0,21,894	0/1:25,0:24:95.74:96,0,103	0/0:29,0:29:21.53:0,22,729	0/0:21,1:21:19.52:0,20,722	0/0:15,0:14:25.21:0,25,371	0/1:39,0:38:12.71:13,0,248	0/0:27,0:27:38.97:0,39,689	0/0:30,0:30:3.19:0,3,969	0/0:29,0:29:37.85:0,38,855	0/0:38,0:37:42.49:0,42,1184	0/0:39,0:38:53.79:0,54,1296	0/1:29,0:29:0.89:1,0,812	0/1:19,0:15:27.25:27,0,80	./.	1/1:55,0:52:6.47:54,6,0	0/0:27,0:27:0.16:0,0,648	0/1:17,0:17:43.94:44,0,412	0/0:53,0:50:76.03:0,76,1458	0/0:21,0:21:7.54:0,8,638	0/0:27,0:25:34.71:0,35,762	0/0:6,0:6:6.01:0,6,61	0/1:25,1:26:33.64:34,0,524
chr10	107781738	.	CGT	C	982.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.833;DP=729;FS=2.798;HRun=0;HaplotypeScore=84.7807;InbreedingCoeff=1.0000;MQ=86.30;MQ0=0;MQRankSum=-0.835;QD=37.77;ReadPosRankSum=1.829;VQSLOD=5.9244;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,184,3627	0/0:19,0:19:57.15:0,57,1084	0/0:25,0:25:72.21:0,72,1351	0/0:22,0:22:57.14:0,57,1041	0/0:30,0:30:90.31:0,90,1816	0/0:16,0:16:45.14:0,45,878	0/0:26,0:26:78.27:0,78,1562	0/0:29,0:29:87.30:0,87,1732	0/0:19,0:19:57.20:0,57,1147	0/0:19,0:19:57.17:0,57,1119	0/0:24,0:24:72.25:0,72,1448	1/1:0,26:25:66.23:1077,66,0	0/0:21,0:21:63.22:0,63,1279	0/0:28,0:28:84.29:0,84,1684	0/0:30,0:30:90.31:0,90,1802	0/0:18,0:18:54.19:0,54,1095	0/0:26,0:25:78.27:0,78,1570	0/0:23,0:23:69.19:0,69,1357	0/0:15,0:15:45.15:0,45,881	0/0:31,0:31:90.27:0,90,1809	0/0:43,0:43:99:0,129,2619	0/0:27,0:27:78.27:0,78,1570	0/0:21,0:21:63.19:0,63,1190	0/0:33,0:33:99:0,99,2010	0/0:28,0:28:81.28:0,81,1634	0/0:29,0:29:87.30:0,87,1750	0/0:22,0:22:66.23:0,66,1324	0/0:18,0:18:54.19:0,54,1088
chr10	107782270	.	AGT	A	549.66	PASS	AB=0.961;AC=21;AF=0.404;AN=52;BaseQRankSum=3.765;DP=624;FS=2.875;HRun=0;HaplotypeScore=93.3642;InbreedingCoeff=-0.5146;MQ=57.67;MQ0=42;MQRankSum=-0.636;QD=1.26;ReadPosRankSum=0.993;VQSLOD=1.5754;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:42:33.69:34,0,493	0/0:9,0:9:5.87:0,6,41	./.	./.	0/0:17,0:17:17.37:0,17,265	0/1:16,0:17:10.81:11,0,86	0/1:23,0:23:24.25:24,0,193	0/1:32,0:29:0.44:0,0,20	0/1:18,0:17:15.03:15,0,159	0/1:14,0:14:20.42:20,0,123	0/0:9,0:9:3.01:0,3,42	1/1:26,0:22:16.92:81,17,0	0/1:15,4:17:8.91:9,0,278	0/1:19,1:18:19.22:19,0,372	0/1:18,7:24:74.95:75,0,167	0/1:13,0:12:47.36:47,0,124	0/1:30,2:31:94.59:95,0,462	0/1:26,0:26:82.79:83,0,197	0/0:19,0:18:8.99:0,9,52	0/1:15,0:11:14.03:14,0,18	0/0:29,0:25:9.46:0,9,83	0/1:6,0:6:35.95:56,0,36	0/1:16,0:15:20.42:20,0,148	0/1:20,2:21:9.19:9,0,252	0/1:32,1:32:12.57:13,0,222	0/1:22,0:23:27.32:27,0,177	0/1:13,0:12:8.35:44,0,8	0/0:3,0:3:3:0,3,29
chr10	107782287	.	GT	G	278.24	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.764;DP=662;FS=3.626;HRun=1;HaplotypeScore=92.3358;InbreedingCoeff=0.6258;MQ=50.21;MQ0=65;MQRankSum=-3.597;QD=11.59;ReadPosRankSum=2.818;VQSLOD=2.3483;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:99:0,100,1354	0/0:10,0:10:21.03:0,21,235	0/0:50,0:10:21.77:0,22,231	0/0:61,0:15:38.71:0,39,440	0/0:21,0:20:44.51:0,45,610	0/0:19,0:18:37.36:0,37,476	0/0:26,0:25:31.39:0,31,717	0/0:26,0:22:60.08:0,60,740	0/0:18,0:17:41.67:0,42,512	0/0:15,0:15:43.74:0,44,544	0/0:10,0:10:18.03:0,18,206	1/1:6,18:19:1.44:354,1,0	0/0:21,0:19:47.64:0,48,632	0/0:20,0:18:50.13:0,50,687	0/0:23,0:22:45.71:0,46,561	0/0:17,0:16:34.64:0,35,432	0/0:34,0:34:67.58:0,68,971	0/0:27,0:27:64.30:0,64,757	0/0:13,0:10:27.97:0,28,351	0/0:21,0:17:34.44:0,34,427	0/0:31,0:26:36.58:0,37,476	0/0:11,0:11:25.33:0,25,289	0/0:15,0:14:29.12:0,29,384	0/0:27,0:26:59.16:0,59,762	0/0:33,0:31:71.47:0,71,943	0/0:28,0:28:78.89:0,79,1001	0/0:15,0:14:23.07:0,23,259	0/0:2,0:2:6.02:0,6,71
chr10	107782290	.	TGTGTGTGTGTGTGTGTGTGTG	T	987.53	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.700;DP=655;FS=2.529;HRun=0;HaplotypeScore=272.2995;InbreedingCoeff=0.6928;MQ=49.80;MQ0=68;MQRankSum=-2.941;QD=41.15;ReadPosRankSum=0.584;VQSLOD=2.6338;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:87.77:0,88,6282	0/0:7,0:8:9.50:0,10,643	0/0:51,0:9:3.90:0,4,42	0/0:62,0:14:19.55:0,20,305	0/0:22,0:21:48.16:0,48,2985	0/0:20,0:19:38.80:0,39,1849	0/0:27,0:25:50.20:0,50,2737	0/0:24,0:20:45.03:0,45,985	0/0:17,0:16:39.09:0,39,1837	0/0:15,0:15:41.46:0,41,1992	0/0:10,0:10:18.06:0,18,574	1/1:18,6:19:23.85:1080,24,0	0/0:20,0:18:39.58:0,40,2672	0/0:20,0:18:45.15:0,45,3848	0/0:23,0:22:39.60:0,40,2515	0/0:16,0:15:34.44:0,34,2262	0/0:35,0:34:37.60:0,38,5118	0/0:25,0:25:36.89:0,37,3157	0/0:12,0:9:12.93:0,13,323	0/0:21,0:17:39.01:0,39,1025	0/0:30,0:25:20.20:0,20,748	0/0:11,0:11:24.08:0,24,1443	0/0:16,0:15:33.58:0,34,2093	0/0:26,0:25:54.18:0,54,2919	0/0:31,0:29:40.08:0,40,2609	0/0:29,0:29:71.35:0,71,3536	0/0:15,0:14:26.17:0,26,421	0/0:2,0:2:3.01:0,3,220
chr10	107782302	.	TGTGTGTGTG	T	1293.93	PASS	AB=0.957;AC=10;AF=0.179;AN=56;BaseQRankSum=9.813;DP=612;FS=2.532;HRun=0;HaplotypeScore=155.7454;InbreedingCoeff=0.6654;MQ=53.14;MQ0=58;MQRankSum=-1.603;QD=11.55;ReadPosRankSum=-1.260;VQSLOD=2.5922;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:86.83:0,87,2838	0/0:8,0:8:8.62:0,9,200	0/0:50,0:8:20.51:0,21,226	0/0:55,0:14:39.02:0,39,443	0/0:24,0:23:45.15:0,45,1263	0/0:21,0:20:38.72:0,39,797	0/0:24,0:22:57.13:0,57,1346	0/1:19,0:16:19.95:54,0,20	0/0:22,0:21:42.25:0,42,846	0/0:15,0:15:29.61:0,30,771	0/0:10,0:10:18.06:0,18,316	1/1:13,0:12:8.95:509,9,0	0/0:18,0:16:36.12:0,36,1183	0/0:21,0:19:48.16:0,48,1780	0/0:21,0:20:36.59:0,37,1055	0/0:16,0:15:36.56:0,37,1046	0/0:32,0:31:36.16:0,36,2157	0/0:22,0:22:6.92:0,7,1255	1/1:10,0:6:13.22:181,13,0	0/1:19,2:17:70.96:308,0,71	1/1:34,0:30:13.68:102,14,0	0/0:12,0:12:30.10:0,30,688	0/0:18,0:17:39.60:0,40,921	0/0:26,0:25:63.21:0,63,1520	0/0:22,0:20:33.58:0,34,1015	0/0:26,0:26:50.17:0,50,1344	1/1:12,3:14:22.85:300,23,0	0/0:1,0:1:3.01:0,3,52
chr10	107782310	.	TG	T	586.61	PASS	AB=0.906;AC=16;AF=0.286;AN=56;BaseQRankSum=10.521;DP=607;FS=0.000;HRun=2;HaplotypeScore=94.2012;InbreedingCoeff=0.7347;MQ=59.91;MQ0=47;MQRankSum=-1.710;QD=4.19;ReadPosRankSum=-1.463;VQSLOD=-0.2083;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,1:44:84.11:0,84,1515	1/1:6,2:8:3.39:63,3,0	0/0:49,0:12:28.35:0,28,343	0/0:49,0:20:50.66:0,51,566	0/0:22,0:21:54:0,54,703	0/0:18,0:17:41.21:0,41,503	0/0:27,0:25:55.50:0,56,851	1/1:13,0:11:18.26:94,18,0	0/0:22,0:21:42.02:0,42,578	0/0:12,0:12:28.67:0,29,385	0/0:14,0:14:36.10:0,36,463	1/1:15,1:15:15:186,15,0	0/0:18,0:16:39.09:0,39,513	0/0:23,0:21:53.61:0,54,711	0/0:20,0:19:37.59:0,38,445	0/0:20,0:19:47.54:0,48,563	0/0:32,1:32:45.84:0,46,853	0/1:20,2:22:21.53:22,0,487	1/1:13,0:9:7.08:28,7,0	0/1:15,2:16:13.99:64,0,14	1/1:33,1:30:37.02:157,37,0	0/0:11,0:11:28.95:0,29,341	0/0:21,0:20:50.51:0,51,628	0/0:28,0:27:71.72:0,72,959	0/0:15,0:14:32.59:0,33,427	0/0:21,0:21:58.17:0,58,723	1/1:15,1:15:14.13:152,14,0	1/1:1,0:1:0.47:1,0,0
chr10	107782311	.	G	GGT	2293.23	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=2.124;DP=604;FS=2.331;HRun=0;HaplotypeScore=97.7839;InbreedingCoeff=0.9553;MQ=61.01;MQ0=47;MQRankSum=-1.776;QD=20.48;ReadPosRankSum=-0.746;VQSLOD=3.8871;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,102,1269	1/1:3,4:8:3.34:44,3,0	0/0:50,0:13:18.09:0,18,273	0/0:49,0:20:38.96:0,39,500	0/0:22,0:21:48.14:0,48,591	0/0:18,0:17:39.12:0,39,481	0/0:27,0:25:60.15:0,60,732	1/1:12,0:10:27.09:409,27,0	0/0:20,0:19:42.06:0,42,483	0/0:12,0:12:24.07:0,24,300	0/0:14,0:14:33.09:0,33,401	1/1:16,0:15:40.23:403,40,0	0/0:18,0:16:33.10:0,33,404	0/0:23,0:21:50.99:0,51,613	0/0:20,0:19:35.84:0,36,429	0/0:22,0:21:47.50:0,47,555	0/0:32,0:32:71.91:0,72,830	0/0:22,0:22:41.76:0,42,486	1/1:13,0:9:9.03:144,9,0	1/1:16,0:15:35.97:469,36,0	1/1:32,1:29:44.81:655,45,0	0/0:11,0:11:27.08:0,27,333	0/0:21,0:20:44.17:0,44,523	0/0:28,0:27:69.21:0,69,856	0/0:15,0:14:27.08:0,27,334	0/0:21,0:21:54.15:0,54,657	1/1:14,0:13:32.91:357,33,0	./.
chr10	107782703	.	G	GA	158.55	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.453;DP=443;FS=2.528;HRun=9;HaplotypeScore=52.9566;InbreedingCoeff=0.8696;MQ=64.27;MQ0=1;MQRankSum=0.179;QD=12.20;ReadPosRankSum=-0.689;VQSLOD=2.6978;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:58.23:0,58,631	1/1:3,10:13:24.02:252,24,0	0/0:10,0:6:17.97:0,18,151	0/0:17,1:10:11.96:0,12,161	0/0:21,0:21:56.96:0,57,489	0/0:14,0:14:32.97:0,33,286	0/0:8,0:8:20.99:0,21,182	0/0:20,0:20:46.03:0,46,381	0/0:12,0:12:32.98:0,33,286	0/0:14,0:14:35.97:0,36,310	0/0:22,0:22:56.99:0,57,494	0/0:9,0:9:23.99:0,24,208	0/0:10,0:10:26.99:0,27,234	0/0:10,0:10:23.99:0,24,208	0/0:15,0:15:38.99:0,39,339	0/0:15,0:15:38.99:0,39,339	0/0:32,0:32:86.97:0,87,755	0/0:33,0:32:83.94:0,84,722	0/0:20,0:20:50.99:0,51,442	0/0:17,0:17:41.87:0,42,350	0/0:6,0:6:12:0,12,104	0/0:4,0:4:9:0,9,78	0/0:8,0:8:20.99:0,21,182	0/0:12,0:12:32.99:0,33,287	0/0:17,0:17:38.91:0,39,333	0/0:22,0:22:53.98:0,54,468	0/0:25,1:24:26.80:0,27,461	0/0:8,0:8:24:0,24,208
chr10	107784479	.	C	CGGAT	7104.10	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-12.001;DP=646;FS=6.769;HRun=0;HaplotypeScore=103.6884;InbreedingCoeff=0.9969;MQ=86.81;MQ0=0;MQRankSum=-3.087;QD=53.41;ReadPosRankSum=-1.279;VQSLOD=5.3527;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,147,2599	0/0:12,0:12:33.07:0,33,571	0/0:18,0:18:48.13:0,48,783	0/0:28,0:27:68.97:0,69,1066	0/0:12,0:12:33.11:0,33,606	0/0:23,0:23:60.12:0,60,1064	0/0:29,0:29:75.26:0,75,1379	1/1:10,18:31:57.15:1314,57,0	0/0:30,0:30:78.27:0,78,1409	0/0:9,0:9:27.09:0,27,496	0/0:12,0:12:33.11:0,33,605	0/0:23,0:23:60.21:0,60,1078	0/0:25,0:25:69.24:0,69,1264	0/0:25,0:25:75.21:0,75,1343	0/0:37,0:36:99:0,111,1969	0/0:23,0:23:66.13:0,66,1070	0/0:35,0:35:96.30:0,96,1705	0/0:25,0:25:75.24:0,75,1325	1/1:2,5:8:18.06:473,18,0	1/1:1,10:13:30.03:728,30,0	1/1:2,41:49:93.32:2453,93,0	0/0:13,0:13:24.07:0,24,410	0/0:11,0:11:30.09:0,30,520	0/0:27,0:27:69.21:0,69,1221	0/0:11,0:11:33.11:0,33,606	0/0:18,0:18:51.13:0,51,882	1/1:2,28:32:81.28:2136,81,0	0/0:12,0:12:33.11:0,33,596
chr10	107785834	.	TTTTG	T	3590.85	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-3.484;DP=741;FS=0.822;HRun=0;HaplotypeScore=272.1254;InbreedingCoeff=0.8867;MQ=64.24;MQ0=8;MQRankSum=-4.186;QD=25.29;ReadPosRankSum=-2.791;VQSLOD=2.5230;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,129,2915	0/1:11,0:11:99:120,0,104	0/0:44,0:26:71.27:0,71,940	0/0:21,0:14:41.74:0,42,670	0/0:28,0:28:78.24:0,78,1912	0/0:33,0:33:99:0,99,2051	0/0:24,0:24:72.21:0,72,1689	1/1:3,28:32:76.79:784,77,0	0/0:28,0:28:78.08:0,78,1661	0/0:23,0:23:66.18:0,66,1296	0/0:19,0:19:57.07:0,57,1084	0/0:29,0:29:83.91:0,84,1878	0/0:24,0:24:72.21:0,72,1725	0/0:18,0:18:54.16:0,54,1268	0/0:27,0:27:81.21:0,81,1857	0/0:26,0:26:72.12:0,72,1526	0/0:30,0:30:90.21:0,90,2055	0/0:12,0:12:36.05:0,36,702	1/1:0,23:24:70.93:838,71,0	1/1:1,19:20:33.06:546,33,0	1/1:20,8:28:56.64:614,57,0	0/0:29,0:29:78.17:0,78,1593	0/0:31,0:31:93.26:0,93,2203	0/0:45,0:45:99:0,135,3155	0/0:22,0:22:66.18:0,66,1657	0/0:25,0:25:75.20:0,75,1586	1/1:0,27:27:38.85:689,39,0	0/0:15,0:15:39.12:0,39,944
chr10	107785836	.	TTGTG	T	1609.47	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=3.677;DP=750;FS=1.758;HRun=0;HaplotypeScore=278.6014;InbreedingCoeff=0.8770;MQ=64.18;MQ0=8;MQRankSum=-9.051;QD=11.58;ReadPosRankSum=-2.298;VQSLOD=2.1995;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:49:99:0,111,2516	1/1:5,6:11:15.05:246,15,0	0/0:44,0:26:24.04:0,24,410	0/0:20,0:14:20.80:0,21,379	0/0:27,0:27:69.22:0,69,1610	0/0:33,0:33:66.21:0,66,1530	0/0:26,0:26:63.20:0,63,1434	0/1:31,0:31:48.30:188,0,48	0/0:28,0:28:54.18:0,54,1287	0/0:25,0:25:51.08:0,51,1063	0/0:17,0:19:44.86:0,45,903	0/0:28,0:29:65.77:0,66,1511	0/0:24,0:24:57.20:0,57,1371	0/0:18,0:18:42.14:0,42,1000	0/0:27,0:27:60.21:0,60,1453	0/0:25,0:27:62.93:0,63,1393	0/0:31,0:31:69.21:0,69,1607	0/0:13,0:13:30.10:0,30,664	1/1:24,0:24:28.80:339,29,0	1/1:19,1:20:15.80:356,16,0	1/1:26,0:26:20.72:195,21,0	0/0:31,0:31:52.91:0,53,1251	0/0:30,0:32:84.25:0,84,1876	0/0:44,0:45:99:0,111,2592	0/0:24,0:24:63.22:0,63,1477	0/0:25,0:25:51.13:0,51,1164	1/1:27,0:27:38.83:462,39,0	0/0:13,0:13:22.98:0,23,817
chr10	107790834	.	ACTGT	A	1358.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.061;DP=628;FS=1.654;HRun=0;HaplotypeScore=99.6274;InbreedingCoeff=0.9910;MQ=90.14;MQ0=0;MQRankSum=-1.577;QD=50.32;ReadPosRankSum=1.588;VQSLOD=4.6769;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,2870	0/0:16,0:16:48.16:0,48,1301	0/0:24,0:24:66.23:0,66,1744	0/0:24,0:24:55.72:0,56,1371	0/0:26,0:26:72.23:0,72,1917	0/0:31,0:31:93.31:0,93,2475	0/0:20,0:20:60.21:0,60,1638	0/0:33,0:33:90.30:0,90,2346	0/0:16,0:16:45.15:0,45,1201	0/0:27,0:27:81.28:0,81,2191	0/0:20,0:20:60.19:0,60,1572	1/1:1,26:27:75.26:1453,75,0	0/0:24,0:24:69.24:0,69,1861	0/0:22,0:22:66.23:0,66,1809	0/0:28,0:28:84.27:0,84,2243	0/0:21,0:21:60.19:0,60,1520	0/0:30,0:30:90.31:0,90,2415	0/0:6,0:6:18.06:0,18,479	0/0:16,0:16:42.14:0,42,1044	0/0:29,0:29:84.29:0,84,2300	0/0:21,0:21:60.19:0,60,1571	0/0:16,0:16:42.13:0,42,1060	0/0:24,0:24:72.25:0,72,1947	0/0:18,0:18:54.19:0,54,1442	0/0:18,0:18:54.17:0,54,1414	0/0:21,0:21:60.21:0,60,1616	0/0:23,0:22:69.24:0,69,1888	0/0:11,0:11:27.09:0,27,713
chr10	107791142	.	ATCAT	A	875.38	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.703;DP=769;FS=0.743;HRun=0;HaplotypeScore=137.2032;InbreedingCoeff=0.9999;MQ=82.98;MQ0=1;MQRankSum=-7.681;QD=26.53;ReadPosRankSum=1.323;VQSLOD=3.7333;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,2634	0/0:15,0:15:45.15:0,45,1240	0/0:31,0:30:87.90:0,88,2094	0/0:35,0:33:71.48:0,71,2268	0/0:34,0:34:99:0,102,2748	0/0:27,0:27:81.26:0,81,2201	0/0:29,0:29:84.18:0,84,2216	0/0:31,0:31:90.29:0,90,2270	0/0:23,0:23:69.24:0,69,1878	0/0:36,0:36:99:0,105,2869	0/0:26,0:26:78.27:0,78,2097	1/1:10,23:33:71.28:970,71,0	0/0:29,1:30:41.74:0,42,2276	0/0:19,0:19:57.20:0,57,1557	0/0:33,0:33:99:0,99,2635	0/0:32,0:31:96.33:0,96,2666	0/0:28,0:28:84.29:0,84,2263	0/0:22,0:22:65.81:0,66,1639	0/0:29,0:29:87.30:0,87,2340	0/0:28,0:28:81.28:0,81,2208	0/0:33,0:33:96.33:0,96,2596	0/0:18,0:18:54.19:0,54,1473	0/0:24,0:24:66.23:0,66,1821	0/0:23,0:23:63.22:0,63,1670	0/0:21,0:21:63.22:0,63,1655	0/0:23,0:23:66.23:0,66,1787	0/0:33,0:33:99:0,99,2655	0/0:16,0:16:48.16:0,48,1326
chr10	107791148	.	GT	G	147.89	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.415;DP=799;FS=0.761;HRun=2;HaplotypeScore=97.1528;InbreedingCoeff=1.0000;MQ=80.99;MQ0=2;MQRankSum=-7.629;QD=6.43;ReadPosRankSum=2.223;VQSLOD=0.8969;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1633	0/0:16,0:16:48.16:0,48,762	0/0:33,0:29:83.59:0,84,1183	0/0:42,1:38:94.33:0,94,1372	0/0:36,0:36:99:0,108,1722	0/0:29,0:29:87.27:0,87,1341	0/0:30,0:30:89.50:0,89,1360	0/0:31,0:31:93.32:0,93,1480	0/0:24,0:24:72.21:0,72,1104	0/0:39,0:39:99:0,117,1809	0/0:27,0:27:81.26:0,81,1270	1/1:0,23:23:59.76:243,60,0	0/0:31,1:32:85.78:0,86,1430	0/0:21,0:21:63.20:0,63,983	0/0:37,0:37:99:0,111,1718	0/0:33,0:32:99:0,99,1570	0/0:30,0:30:90.29:0,90,1407	0/0:22,0:22:65.81:0,66,1007	0/0:31,0:31:93.31:0,93,1443	0/0:27,0:27:78.25:0,78,1214	0/0:35,0:35:99:0,99,1556	0/0:18,0:18:54.18:0,54,863	0/0:26,0:26:78.23:0,78,1188	0/0:23,0:23:63.21:0,63,1003	0/0:23,0:23:69.24:0,69,1103	0/0:25,0:25:72.24:0,72,1142	0/0:29,0:29:87.30:0,87,1390	0/0:18,0:18:54.13:0,54,811
chr10	107791150	.	GTGATC	G	987.54	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.717;DP=807;FS=2.521;HRun=0;HaplotypeScore=161.4975;InbreedingCoeff=1.0000;MQ=79.40;MQ0=3;MQRankSum=-7.938;QD=41.15;ReadPosRankSum=2.575;VQSLOD=3.9726;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,3222	0/0:16,0:16:48.16:0,48,1520	0/0:33,0:30:87.67:0,88,2312	0/0:45,0:39:93.64:0,94,2647	0/0:37,0:37:99:0,111,3507	0/0:29,0:29:87.28:0,87,2757	0/0:29,0:29:86.51:0,87,2773	0/0:38,0:38:99:0,114,3421	0/0:25,0:25:75.26:0,75,2386	0/0:37,0:37:99:0,108,3497	0/0:27,0:27:81.28:0,81,2669	1/1:1,23:24:62.02:1082,62,0	0/0:30,1:31:42.71:0,43,2913	0/0:20,0:20:60.19:0,60,1922	0/0:38,0:38:99:0,114,3631	0/0:32,0:31:96.33:0,96,3092	0/0:31,0:31:93.32:0,93,3026	0/0:23,0:23:58.44:0,58,1963	0/0:29,0:29:87.29:0,87,2753	0/0:27,0:27:78.27:0,78,2537	0/0:38,0:38:99:0,108,3349	0/0:19,0:19:57.20:0,57,1866	0/0:25,0:25:75.26:0,75,2462	0/0:23,0:23:63.22:0,63,2096	0/0:24,0:24:72.25:0,72,2368	0/0:23,0:23:69.24:0,69,2253	0/0:29,0:29:87.28:0,87,2817	0/0:18,0:18:54.19:0,54,1740
chr10	107796579	.	TAATA	T	562.88	PASS	AC=16;AF=0.333;AN=48;BaseQRankSum=5.923;DP=280;FS=1.042;HRun=0;HaplotypeScore=43.1161;InbreedingCoeff=0.6313;MQ=72.80;MQ0=2;MQRankSum=-0.880;QD=5.36;ReadPosRankSum=-0.668;VQSLOD=1.4770;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,4:11:3.01:46,3,0	1/1:5,0:6:3:28,3,0	./.	./.	0/0:9,0:9:9.03:0,9,195	0/0:14,0:14:33.11:0,33,751	0/0:6,0:6:9.03:0,9,211	1/1:38,0:36:6.02:78,6,0	0/0:10,0:10:9.03:0,9,210	0/0:8,0:8:3.01:0,3,71	0/0:8,0:8:12.04:0,12,240	1/1:4,0:6:6.01:56,6,0	0/0:9,0:9:9.03:0,9,188	0/0:8,0:8:6.02:0,6,141	0/0:6,0:6:3.01:0,3,71	0/0:7,0:7:9.03:0,9,211	0/0:21,0:21:33.11:0,33,756	0/0:19,0:19:36.12:0,36,776	1/1:4,4:8:12.04:186,12,0	1/1:13,1:14:3.01:46,3,0	1/1:2,1:3:3.01:46,3,0	./.	0/0:6,0:6:9.03:0,9,207	./.	0/0:8,0:8:9.03:0,9,207	0/0:7,0:7:9.03:0,9,196	1/1:13,6:19:15.05:232,15,0	0/0:6,0:6:3.01:0,3,70
chr10	107797234	.	GTTC	G	3694.86	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.880;DP=673;FS=1.469;HRun=0;HaplotypeScore=92.1100;InbreedingCoeff=0.9979;MQ=57.59;MQ0=2;MQRankSum=1.527;QD=32.13;ReadPosRankSum=0.198;VQSLOD=4.0606;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,150,3266	0/0:6,0:6:18.05:0,18,345	0/0:35,0:22:48.16:0,48,961	0/0:23,0:18:42.14:0,42,883	0/0:16,0:16:48.16:0,48,1055	0/0:25,0:25:75.24:0,75,1593	0/0:29,0:29:81.26:0,81,1711	1/1:6,25:30:57.16:859,57,0	0/0:21,0:21:57.20:0,57,1258	0/0:19,0:19:54.18:0,54,1164	0/0:23,0:23:66.23:0,66,1472	0/0:21,0:21:63.21:0,63,995	0/0:19,0:19:57.18:0,57,1230	0/0:16,0:16:45.15:0,45,1005	0/0:37,0:37:99:0,105,2303	0/0:24,0:24:66.23:0,66,1457	0/0:37,0:37:99:0,111,2437	0/0:30,0:30:87.30:0,87,1941	1/1:1,12:12:36.12:583,36,0	1/1:0,24:24:51.17:833,51,0	1/1:1,25:26:48.16:784,48,0	0/0:18,0:18:54.07:0,54,1071	0/0:17,0:17:51.16:0,51,1095	0/0:32,0:32:93.32:0,93,2057	0/0:10,0:10:30.10:0,30,670	0/0:29,0:29:84.28:0,84,1835	1/1:1,20:17:39.13:636,39,0	0/0:19,0:19:57.17:0,57,1209
chr10	107797610	.	G	GT	2380.63	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.571;DP=462;FS=10.142;HRun=9;HaplotypeScore=46.6714;InbreedingCoeff=0.9564;MQ=82.39;MQ0=0;MQRankSum=-1.096;QD=23.81;ReadPosRankSum=-2.560;VQSLOD=3.0368;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:38.98:0,39,339	0/0:2,0:2:6:0,6,52	0/0:15,0:16:31.65:0,32,283	0/0:12,0:12:14.98:0,15,129	0/0:15,0:15:38.99:0,39,339	0/0:18,0:18:53.98:0,54,466	0/0:14,0:14:32.99:0,33,287	1/1:11,26:37:78.21:863,78,0	0/0:17,0:17:32.71:0,33,307	0/0:10,0:10:20.02:0,20,160	0/0:17,0:17:38.97:0,39,334	0/0:23,0:23:59.96:0,60,517	0/0:19,0:19:50.97:0,51,443	0/0:18,0:18:47.96:0,48,412	0/0:15,0:15:44.99:0,45,391	0/0:18,0:18:53.99:0,54,469	0/0:12,0:12:32.95:0,33,279	0/0:22,0:22:56.97:0,57,494	1/1:4,12:16:44.95:471,45,0	1/1:2,15:17:45.12:498,45,0	1/1:2,4:6:9.02:100,9,0	0/0:10,0:10:29.99:0,30,260	0/0:10,0:10:26.99:0,27,234	0/0:23,0:23:53.96:0,54,469	0/0:20,0:20:50.98:0,51,443	0/0:23,1:24:50.96:0,51,443	1/1:5,19:24:57.13:621,57,0	0/0:10,0:10:24:0,24,208
chr10	107797739	.	AGG	A	2367.41	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.481;DP=353;FS=8.790;HRun=10;HaplotypeScore=44.2411;InbreedingCoeff=0.8680;MQ=72.52;MQ0=1;MQRankSum=-0.236;QD=21.14;ReadPosRankSum=4.468;VQSLOD=1.4450;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:48.14:0,48,705	1/1:1,3:4:6.01:67,6,0	0/0:6,0:6:9.47:0,9,106	0/0:11,0:11:3.98:0,4,173	0/0:9,0:10:12.04:0,12,189	0/0:11,0:11:32.58:0,33,462	0/0:12,0:12:24.08:0,24,376	1/1:5,19:24:51.11:564,51,0	0/0:13,0:14:35.59:0,36,504	0/0:3,0:3:9.03:0,9,143	0/0:9,0:9:21.03:0,21,256	1/1:4,15:19:36.09:401,36,0	0/0:5,0:5:12.04:0,12,188	0/0:13,0:13:33.09:0,33,477	0/0:14,0:14:30.10:0,30,474	0/0:16,0:16:36.08:0,36,500	0/0:22,0:22:54.17:0,54,818	0/0:19,0:20:44.59:0,45,599	1/1:6,8:14:27.07:300,27,0	1/1:5,12:17:33.06:367,33,0	1/1:2,27:28:69.14:755,69,0	0/0:3,0:3:6.01:0,6,73	0/0:5,0:5:12.03:0,12,161	0/0:20,0:20:51.16:0,51,779	0/0:11,0:11:15.05:0,15,234	0/0:11,0:11:24.07:0,24,357	1/1:1,4:5:9.02:100,9,0	0/0:3,0:3:6.02:0,6,92
chr10	107799014	.	CTG	C	506.48	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.250;DP=612;FS=1.083;HRun=0;HaplotypeScore=70.9739;InbreedingCoeff=0.9904;MQ=82.25;MQ0=0;MQRankSum=-2.491;QD=29.79;ReadPosRankSum=1.853;VQSLOD=4.9988;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,2134	0/0:7,0:7:18.06:0,18,321	0/0:21,0:21:60.09:0,60,959	0/0:24,0:24:60.01:0,60,986	0/0:26,0:26:78.27:0,78,1413	0/0:21,0:21:57.20:0,57,1045	0/0:12,0:12:30.06:0,30,486	0/0:31,0:31:81.26:0,81,1426	0/0:20,0:20:60.21:0,60,1099	0/0:30,0:30:90.31:0,90,1649	0/0:21,0:21:60.21:0,60,1093	1/1:0,17:17:42.14:601,42,0	0/0:24,0:24:72.20:0,72,1222	0/0:21,0:21:63.20:0,63,1125	0/0:23,0:23:69.24:0,69,1265	0/0:22,0:22:63.22:0,63,1154	0/0:18,0:18:54.19:0,54,989	0/0:10,0:10:30.09:0,30,520	0/0:29,0:29:81.28:0,81,1483	0/0:31,0:31:90.29:0,90,1612	0/0:14,0:14:39.12:0,39,685	0/0:28,0:28:81.28:0,81,1475	0/0:22,0:22:66.20:0,66,1177	0/0:13,0:13:36.12:0,36,660	0/0:21,0:21:63.19:0,63,1099	0/0:31,0:31:93.29:0,93,1612	0/0:26,0:26:78.27:0,78,1426	0/0:10,0:10:30.10:0,30,550
chr10	107799848	.	GTGGGGTGGGATGGGATGGGATGGGA	G	663.03	PASS	AB=0.849;AC=10;AF=0.179;AN=56;BaseQRankSum=1.237;DP=332;FS=2.524;HRun=0;HaplotypeScore=152.0927;InbreedingCoeff=0.1128;MQ=63.72;MQ0=18;MQRankSum=-0.501;QD=3.33;ReadPosRankSum=-0.831;VQSLOD=2.8769;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:33.07:0,33,1456	0/0:1,0:1:3:0,3,26	0/1:23,0:12:15.75:16,0,120	0/1:77,0:35:33.39:33,0,231	0/0:10,0:10:23.94:0,24,417	0/0:5,0:5:15:0,15,187	0/0:11,0:11:27:0,27,604	0/1:12,0:12:94.92:95,0,114	0/0:6,0:5:12.04:0,12,997	0/0:9,0:7:21.04:0,21,878	0/0:4,0:4:8.91:0,9,128	0/1:7,29:35:60.07:390,0,60	0/0:4,0:4:12.01:0,12,577	0/0:11,0:10:27.06:0,27,1688	0/0:7,0:7:11.98:0,12,100	0/0:9,0:8:24.02:0,24,788	0/0:6,0:6:11.98:0,12,422	0/0:4,0:4:8.97:0,9,71	1/1:7,0:5:8.94:75,9,0	0/1:2,0:11:48.45:48,0,52	0/1:18,0:17:99:132,0,234	0/0:6,0:6:15.03:0,15,430	0/0:8,0:8:21.05:0,21,1267	0/0:6,0:5:9.92:0,10,449	0/0:9,0:8:14.92:0,15,362	0/0:3,0:3:8.88:0,9,172	1/1:2,0:12:2.90:16,3,0	0/0:2,0:2:6.02:0,6,368
chr10	107802211	.	C	CT	3722.72	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-12.475;DP=611;FS=3.053;HRun=6;HaplotypeScore=54.8132;InbreedingCoeff=0.9907;MQ=72.50;MQ0=0;MQRankSum=0.586;QD=30.51;ReadPosRankSum=-1.802;VQSLOD=3.6348;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:48.11:0,48,490	0/0:8,0:8:21.04:0,21,214	0/0:7,0:7:14.90:0,15,150	0/0:12,0:12:30.06:0,30,306	0/0:18,0:18:48.11:0,48,490	0/0:22,0:22:57.13:0,57,581	0/0:19,0:19:45.09:0,45,452	1/1:5,28:33:84.26:1043,84,0	0/0:26,0:26:60.09:0,60,599	0/0:38,0:38:99:0,108,1102	0/0:23,0:23:55.78:0,56,632	0/0:10,0:10:24.05:0,24,245	0/0:21,0:21:51.11:0,51,520	0/0:23,0:23:66.15:0,66,672	0/0:32,0:32:81.18:0,81,826	0/0:22,0:22:57.13:0,57,582	0/0:29,0:28:69.13:0,69,695	0/0:18,0:18:48.08:0,48,481	1/1:4,11:15:33.11:415,33,0	1/1:3,25:27:69.22:868,69,0	1/1:0,11:11:27.09:340,27,0	0/0:19,0:19:48.08:0,48,482	0/0:26,0:26:69.16:0,69,704	0/0:23,0:23:57.13:0,57,582	0/0:31,0:31:84.17:0,84,849	0/0:34,0:34:75.16:0,75,765	1/1:4,31:34:84.27:1057,84,0	0/0:9,0:9:15.03:0,15,153
chr10	107802487	.	A	AG	871.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.066;DP=744;FS=6.743;HRun=1;HaplotypeScore=75.0743;InbreedingCoeff=0.9998;MQ=86.25;MQ0=0;MQRankSum=-1.610;QD=32.26;ReadPosRankSum=1.021;VQSLOD=2.9541;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:99:0,102,1305	0/0:12,0:12:36.12:0,36,467	0/0:23,0:23:59.73:0,60,694	0/0:28,0:28:65.83:0,66,910	0/0:28,0:28:81.25:0,81,1037	0/0:32,0:32:96.30:0,96,1233	0/0:13,0:13:39.13:0,39,506	0/0:48,0:48:99:0,138,1739	0/0:26,0:26:78.21:0,78,970	0/0:31,0:31:90.29:0,90,1168	0/0:29,0:29:84.26:0,84,1076	1/1:0,27:27:66.22:966,66,0	0/0:24,0:24:72.23:0,72,935	0/0:17,0:17:51.17:0,51,659	0/0:37,0:37:99:0,111,1439	0/0:29,0:29:78.25:0,78,1012	0/0:27,0:27:72.23:0,72,933	0/0:21,0:21:63.17:0,63,787	0/0:30,0:30:90.29:0,90,1168	0/0:32,0:32:67.34:0,67,1080	0/0:35,0:34:99:0,102,1279	0/0:27,0:27:75.24:0,75,961	0/0:15,0:15:45.14:0,45,577	0/0:21,0:21:63.16:0,63,799	0/0:25,0:25:75.23:0,75,959	0/0:26,0:26:78.25:0,78,1012	0/0:31,0:31:93.28:0,93,1176	0/0:15,0:15:43.69:0,44,549
chr10	107802729	.	TTCA	T	109.89	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.695;DP=647;FS=1.951;HRun=0;HaplotypeScore=87.4851;InbreedingCoeff=0.9679;MQ=88.36;MQ0=0;MQRankSum=-1.593;QD=21.98;ReadPosRankSum=2.321;VQSLOD=3.1820;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,2478	1/1:0,5:5:12.04:196,12,0	0/0:28,0:28:78.24:0,78,1607	0/0:19,0:19:48.16:0,48,979	0/0:25,0:25:72.25:0,72,1588	0/0:13,0:13:39.13:0,39,846	0/0:27,0:27:78.24:0,78,1632	0/0:26,0:26:63.19:0,63,1290	0/0:32,0:32:96.33:0,96,2127	0/0:25,0:25:66.20:0,66,1383	0/0:15,0:15:45.15:0,45,985	0/0:26,0:26:78.25:0,78,1683	0/0:21,0:21:63.18:0,63,1319	0/0:30,0:30:84.29:0,84,1875	0/0:36,0:36:99:0,105,2236	0/0:37,0:37:99:0,108,2395	0/0:28,0:28:81.23:0,81,1723	0/0:15,0:15:42.14:0,42,930	0/0:19,0:19:54.19:0,54,1175	0/0:18,0:18:51.11:0,51,1072	0/0:24,0:24:66.23:0,66,1466	0/0:19,0:19:57.20:0,57,1270	0/0:16,0:16:45.15:0,45,952	0/0:31,0:31:90.31:0,90,1974	0/0:13,0:13:39.12:0,39,814	0/0:23,0:23:69.24:0,69,1513	0/0:25,0:25:66.23:0,66,1468	0/0:13,0:13:30.10:0,30,668
chr10	107803035	.	GAC	G	313.90	PASS	AB=0.931;AC=14;AF=0.259;AN=54;BaseQRankSum=3.492;DP=577;FS=8.769;HRun=0;HaplotypeScore=72.6351;InbreedingCoeff=0.0983;MQ=66.20;MQ0=7;MQRankSum=0.505;QD=1.40;ReadPosRankSum=-0.519;VQSLOD=0.6388;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,1:30:35.39:35,0,266	0/0:6,0:6:3:0,3,25	./.	0/0:32,0:22:0.47:0,0,1	0/1:20,3:23:8.98:9,0,148	1/1:7,9:16:12.03:131,12,0	1/1:11,5:16:2.69:32,3,0	0/0:20,0:20:9.03:0,9,115	0/1:20,1:20:20.70:21,0,122	0/0:15,0:14:5.12:0,5,210	0/0:15,0:15:9.01:0,9,112	0/0:18,0:25:6:0,6,52	0/0:15,0:15:20.94:0,21,253	0/0:17,0:17:20.92:0,21,255	0/0:13,0:25:15.47:0,15,148	0/1:14,0:14:30.61:31,0,161	0/0:38,2:40:27.10:0,27,715	0/0:26,0:28:18.73:0,19,379	0/0:18,0:16:5.98:0,6,48	0/0:9,0:8:9:0,9,94	0/1:26,3:29:11.81:12,0,157	0/1:20,1:21:20.59:21,0,236	0/0:15,0:15:12.04:0,12,179	0/1:26,2:28:41.21:41,0,280	1/1:12,6:18:11.86:112,12,0	0/0:23,0:23:17.10:0,17,246	0/0:19,0:20:30.02:0,30,366	0/1:6,1:7:23.70:24,0,80
chr10	107803821	.	C	CT	1231.31	PASS	AB=0.792;AC=14;AF=0.250;AN=56;BaseQRankSum=-2.307;DP=550;FS=4.159;HRun=12;HaplotypeScore=65.3534;InbreedingCoeff=0.4386;MQ=60.07;MQ0=7;MQRankSum=-0.352;QD=6.48;ReadPosRankSum=-1.913;VQSLOD=1.8265;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:48.43:0,48,352	0/1:8,1:9:9.52:10,0,114	1/1:15,0:6:3.35:16,3,0	0/0:6,0:4:2.98:0,3,22	0/0:31,1:32:7.68:0,8,348	0/0:21,0:22:37.82:0,38,283	0/1:15,1:16:13.66:14,0,137	1/1:20,12:33:28.60:300,29,0	0/0:12,0:16:21.96:0,22,150	0/0:24,0:23:37.80:0,38,272	0/0:24,0:26:48.57:0,49,352	0/1:8,8:15:1.21:105,0,1	0/0:15,0:15:16.17:0,16,118	0/0:18,0:19:25.69:0,26,188	0/0:17,0:17:32.67:0,33,246	0/0:17,0:17:25.85:0,26,186	0/0:32,0:32:45.14:0,45,431	0/0:10,0:10:17.85:0,18,139	1/1:10,15:22:18.56:325,19,0	0/1:10,12:22:32.78:232,0,33	1/1:1,8:9:11.97:111,12,0	0/0:11,0:13:20.98:0,21,130	0/0:16,0:17:27.91:0,28,197	0/1:11,0:11:2.91:3,0,81	0/0:18,0:20:35.78:0,36,274	0/0:25,1:26:39.31:0,39,338	0/1:10,22:33:10.64:282,0,11	0/0:12,0:11:23.90:0,24,185
chr10	107804552	.	A	ATGTTTTGGGGC	5406.12	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-2.189;DP=637;FS=5.062;HRun=0;HaplotypeScore=202.6579;InbreedingCoeff=0.8606;MQ=79.68;MQ0=0;MQRankSum=-6.749;QD=38.89;ReadPosRankSum=-2.559;VQSLOD=3.5874;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:81.23:0,81,2383	0/0:15,0:15:45.11:0,45,1236	0/0:17,0:17:30.09:0,30,790	0/0:18,0:18:32.27:0,32,791	0/0:25,0:25:42.14:0,42,1232	0/0:27,0:27:63.16:0,63,1608	0/0:21,0:21:57.17:0,57,1616	1/1:11,5:27:42.11:1265,42,0	0/0:22,0:22:54.19:0,54,1796	0/0:23,0:23:54.18:0,54,1481	0/0:21,0:21:36.12:0,36,1093	0/1:22,0:22:99:497,0,294	0/0:19,0:19:48.14:0,48,1512	0/0:23,0:23:60.17:0,60,1639	0/0:28,0:28:69.22:0,69,2005	0/0:21,0:21:54.19:0,54,1799	0/0:32,0:32:81.26:0,81,2367	0/0:18,0:18:48.15:0,48,1495	1/1:19,3:27:36.03:1216,36,0	1/1:11,7:27:21.07:818,21,0	1/1:11,1:19:6.02:286,6,0	0/0:20,0:20:36.11:0,36,1122	0/0:29,0:29:51.17:0,51,1592	0/0:15,0:15:36.12:0,36,1145	0/0:26,0:26:39.10:0,39,1011	0/0:24,0:24:45.04:0,45,1032	1/1:4,9:17:24.08:1325,24,0	0/0:12,0:12:36.10:0,36,835
chr10	107804564	.	T	TGTGGTGACTGCA	2741.82	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=4.398;DP=584;FS=0.611;HRun=0;HaplotypeScore=211.1203;InbreedingCoeff=0.2111;MQ=84.96;MQ0=0;MQRankSum=-10.214;QD=20.93;ReadPosRankSum=2.034;VQSLOD=2.8230;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:72.21:0,72,2390	0/0:17,0:17:42.11:0,42,1265	0/0:20,0:20:33.04:0,33,755	0/0:21,0:21:45.07:0,45,1200	0/0:19,0:19:42.14:0,42,1430	0/0:25,0:25:48.16:0,48,1649	0/0:22,0:22:54.19:0,54,1834	0/1:22,0:22:83.06:83,0,663	0/0:18,0:18:51.18:0,51,1807	0/0:21,0:21:39.13:0,39,1346	0/0:17,0:17:30.09:0,30,990	1/1:8,12:27:39.13:2251,39,0	0/0:19,0:19:48.14:0,48,1597	0/0:21,0:21:51.18:0,51,1820	0/0:24,0:24:63.22:0,63,2210	0/0:23,0:23:66.21:0,66,2209	0/0:32,0:32:84.22:0,84,2621	0/0:17,0:17:42.61:0,43,1386	0/1:25,0:25:99:164,0,442	0/1:23,0:23:99:108,0,138	0/1:17,0:17:48.63:49,0,322	0/0:19,0:19:42.13:0,42,1341	0/0:21,0:21:48.15:0,48,1631	0/0:15,0:15:39.13:0,39,1346	0/0:17,0:17:32.98:0,33,1017	0/0:21,0:21:45.12:0,45,1319	0/1:17,0:17:9.23:224,0,9	0/0:13,0:13:33.10:0,33,1081
chr10	107806037	.	TTGTGTG	T	433.55	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.868;DP=607;FS=2.854;HRun=0;HaplotypeScore=124.7938;InbreedingCoeff=0.6720;MQ=65.49;MQ0=21;MQRankSum=-3.762;QD=25.50;ReadPosRankSum=0.946;VQSLOD=3.5445;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:42.12:0,42,895	0/0:6,0:11:9.03:0,9,193	0/0:41,0:17:3.01:0,3,55	0/0:49,0:24:12.04:0,12,190	0/0:22,0:22:28.34:0,28,829	0/0:24,0:27:42.09:0,42,1046	0/0:20,0:20:27.09:0,27,660	0/0:30,0:29:39.12:0,39,641	0/0:22,0:26:36.09:0,36,873	0/0:12,0:12:18.06:0,18,437	0/0:9,0:9:9.03:0,9,291	1/1:6,11:17:27.09:527,27,0	0/0:17,0:17:33.11:0,33,930	0/0:14,0:15:20.93:0,21,461	0/0:20,0:21:39.12:0,39,1121	0/0:23,0:23:45.15:0,45,1275	0/0:29,0:30:47.04:0,47,1057	0/0:16,0:16:29.62:0,30,606	0/0:11,0:10:18:0,18,260	0/0:13,0:17:18:0,18,336	0/0:28,0:38:21.06:0,21,416	0/0:15,0:15:14.97:0,15,364	0/0:13,0:13:15.02:0,15,256	0/0:26,0:26:39.13:0,39,1189	0/0:17,0:18:21.07:0,21,539	0/0:20,0:18:15.80:0,16,450	0/0:15,0:18:19.84:0,20,333	0/0:10,0:9:9.01:0,9,197
chr10	107807375	.	CCTTGGGCTTGCTAGGCAAGTGCT	C	5491.03	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=9.489;DP=494;FS=1.448;HRun=0;HaplotypeScore=247.5682;InbreedingCoeff=0.9727;MQ=51.04;MQ0=50;MQRankSum=-7.571;QD=77.34;ReadPosRankSum=0.602;VQSLOD=4.5070;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.24:0,69,6410	0/0:8,0:8:21.07:0,21,2045	./.	./.	0/0:24,0:21:60.16:0,60,5792	0/0:26,0:26:78.27:0,78,8015	0/0:17,0:16:39.10:0,39,3791	1/1:13,6:13:8.99:180,9,0	0/0:16,0:15:39.13:0,39,3829	0/0:12,0:12:33.11:0,33,3594	0/0:11,0:11:24.07:0,24,2063	0/0:18,0:18:51.18:0,51,5061	0/0:17,0:16:48.16:0,48,4929	0/0:14,0:14:40.02:0,40,4061	0/0:24,0:24:66.21:0,66,6374	0/0:20,0:19:54.19:0,54,5623	0/0:33,0:33:84.29:0,84,8655	0/0:17,0:17:48.16:0,48,3917	1/1:7,6:11:12.04:614,12,0	1/1:4,11:12:33.11:1867,33,0	1/1:1,6:7:15.05:730,15,0	0/0:16,0:16:45.15:0,45,4876	0/0:13,0:13:30.10:0,30,3280	0/0:19,0:18:39.13:0,39,4193	0/0:13,0:12:30.10:0,30,3165	0/0:21,0:21:57.16:0,57,5412	1/1:4,13:16:33.11:2100,33,0	0/0:13,0:13:36.11:0,36,3256
chr10	107808743	.	GA	G	1993.09	PASS	AB=0.852;AC=14;AF=0.250;AN=56;BaseQRankSum=7.142;DP=504;FS=16.719;HRun=11;HaplotypeScore=58.8923;InbreedingCoeff=0.8129;MQ=71.15;MQ0=0;MQRankSum=-1.063;QD=12.30;ReadPosRankSum=3.530;VQSLOD=1.6258;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:26:41.39:0,41,609	1/1:2,8:10:23.95:197,24,0	0/0:9,0:10:18.79:0,19,177	0/0:15,0:13:12.03:0,12,128	0/0:16,0:16:39.08:0,39,403	0/0:17,1:18:29.49:0,29,512	0/0:15,0:15:39.10:0,39,416	1/1:8,16:24:18.88:356,19,0	0/0:13,1:14:17.45:0,17,380	0/0:26,1:27:44.47:0,44,633	0/0:25,0:25:63.03:0,63,623	0/0:1,0:12:25.64:0,26,129	0/0:14,0:14:33.05:0,33,332	0/0:21,0:21:57.12:0,57,589	0/0:19,0:19:45.11:0,45,480	0/0:19,1:20:26.48:0,26,487	0/1:9,3:12:43.87:44,0,187	0/0:11,0:11:30.04:0,30,309	1/1:7,13:20:35.86:290,36,0	1/1:9,25:34:41.21:504,41,0	1/1:1,10:11:29.96:246,30,0	0/0:15,0:15:36.01:0,36,346	0/0:19,0:19:48.07:0,48,474	0/1:17,2:19:7.18:7,0,342	0/0:11,0:11:30.05:0,30,302	0/0:19,0:19:48.08:0,48,482	1/1:3,28:32:41.97:541,42,0	0/0:15,0:15:39.03:0,39,388
chr10	107810362	.	T	TCAAC	570.41	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.713;DP=474;FS=10.238;HRun=0;HaplotypeScore=72.5493;InbreedingCoeff=0.9505;MQ=60.85;MQ0=1;MQRankSum=-1.691;QD=51.86;ReadPosRankSum=-0.521;VQSLOD=4.1142;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.19:0,81,1628	0/0:7,0:7:21.07:0,21,439	0/0:17,0:7:18.05:0,18,320	0/0:22,0:6:12.40:0,12,143	0/0:17,0:17:51.16:0,51,1016	0/0:19,0:19:51.14:0,51,991	0/0:20,0:20:60.14:0,60,1213	0/0:24,0:23:66.16:0,66,1266	0/0:7,0:7:21.07:0,21,440	0/0:20,0:20:60.19:0,60,1178	0/0:22,0:22:63.20:0,63,1245	1/1:1,9:11:27.05:664,27,0	0/0:14,0:14:42.14:0,42,866	0/0:13,0:13:39.13:0,39,817	0/0:11,0:11:33.10:0,33,652	0/0:10,0:10:27.08:0,27,528	0/0:15,0:15:45.15:0,45,930	0/0:19,0:19:57.20:0,57,1173	0/0:15,0:15:45.15:0,45,943	0/0:20,0:20:54.19:0,54,1130	0/0:37,0:37:99:0,108,2181	0/0:11,0:11:30.10:0,30,617	0/0:18,0:18:54.19:0,54,1132	0/0:11,0:11:30.10:0,30,627	0/0:19,0:19:57.17:0,57,1116	0/0:17,0:17:44.20:0,44,942	0/0:22,0:20:51.14:0,51,990	0/0:7,0:7:21.07:0,21,440
chr10	107810433	.	CTT	C	2421.88	PASS	AB=0.938;AC=15;AF=0.268;AN=56;BaseQRankSum=4.981;DP=478;FS=4.682;HRun=14;HaplotypeScore=64.9083;InbreedingCoeff=0.9187;MQ=71.82;MQ0=9;MQRankSum=-0.764;QD=16.36;ReadPosRankSum=0.509;VQSLOD=2.7828;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:17:47.48:0,47,547	1/1:0,7:7:21.02:194,21,0	0/0:44,0:23:52.60:0,53,491	0/0:25,0:10:11.50:0,11,124	0/0:18,0:19:42.11:0,42,541	0/0:14,0:17:38.44:0,38,458	0/0:9,0:9:27.09:0,27,378	1/1:7,21:29:65.74:589,66,0	0/0:6,0:6:17.55:0,18,219	0/0:16,0:16:42.14:0,42,588	0/0:22,0:22:61.96:0,62,787	1/1:2,6:8:20.98:189,21,0	0/0:15,0:15:39.13:0,39,533	0/0:9,0:11:17.55:0,18,219	0/1:14,1:15:3.12:3,0,406	0/0:11,0:13:35.09:0,35,435	0/0:17,0:18:45.14:0,45,614	0/0:21,0:22:60.17:0,60,797	1/1:7,19:27:59.76:540,60,0	1/1:5,20:26:59.71:532,60,0	1/1:6,7:13:17.98:167,18,0	0/0:6,0:6:18.06:0,18,236	0/0:18,0:19:44.62:0,45,579	0/0:5,0:5:12.04:0,12,168	0/0:11,0:16:41.09:0,41,479	0/0:17,0:19:44.10:0,44,536	1/1:4,18:21:46.41:406,46,0	0/0:6,0:9:23.56:0,24,275
chr10	107811818	.	C	CT	1074.08	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.820;DP=647;FS=6.180;HRun=1;HaplotypeScore=61.5461;InbreedingCoeff=0.9823;MQ=92.94;MQ0=0;MQRankSum=-4.133;QD=37.04;ReadPosRankSum=1.439;VQSLOD=3.9840;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1480	0/0:8,0:8:24.08:0,24,311	0/0:29,0:29:80.45:0,80,1085	0/0:27,0:27:75.12:0,75,929	0/0:39,0:39:99:0,114,1447	0/0:21,0:21:57.17:0,57,726	0/0:26,0:26:78.15:0,78,974	0/0:32,0:32:93.29:0,93,1194	0/0:13,0:13:39.10:0,39,479	0/0:30,0:30:87.27:0,87,1106	0/0:21,0:21:63.20:0,63,818	1/1:1,28:29:78.26:1169,78,0	0/0:18,0:18:54.18:0,54,700	0/0:31,0:31:93.29:0,93,1193	0/0:35,0:35:99:0,102,1322	0/0:26,0:26:72.22:0,72,922	0/0:21,0:21:60.19:0,60,779	0/0:17,0:17:48.14:0,48,597	0/0:24,0:24:66.21:0,66,857	0/0:18,0:18:54.16:0,54,686	0/0:13,0:13:36.12:0,36,467	0/0:22,0:22:66.20:0,66,832	0/0:22,0:22:60.19:0,60,779	0/0:20,0:20:57.19:0,57,740	0/0:22,0:22:63.18:0,63,790	0/0:24,0:24:66.21:0,66,845	0/0:16,0:16:48.16:0,48,622	0/0:5,0:5:15.05:0,15,195
chr10	107812216	.	C	CT	1903.85	PASS	AB=0.983;AC=14;AF=0.250;AN=56;BaseQRankSum=9.033;DP=493;FS=7.619;HRun=7;HaplotypeScore=76.9688;InbreedingCoeff=0.6802;MQ=77.01;MQ0=4;MQRankSum=0.117;QD=11.40;ReadPosRankSum=-0.578;VQSLOD=2.0134;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:69.01:0,69,650	0/0:5,0:5:12.01:0,12,116	0/1:40,0:20:5.20:5,0,114	0/1:20,1:11:0.60:1,0,28	0/0:23,0:23:50.92:0,51,451	0/0:15,0:15:41.98:0,42,375	0/0:17,0:17:39.02:0,39,364	1/1:5,19:25:47.76:496,48,0	0/0:17,0:17:36.03:0,36,339	0/0:17,0:17:26.90:0,27,225	0/0:16,0:16:32.72:0,33,281	0/1:12,0:12:12.12:17,0,12	0/0:20,0:20:38.86:0,39,320	0/0:10,0:10:18:0,18,164	0/0:19,0:19:40.49:0,40,411	0/0:16,0:16:42.04:0,42,397	0/0:26,0:26:43.10:0,43,405	0/0:20,0:20:53.74:0,54,463	1/1:6,8:14:30.53:338,31,0	1/1:1,17:18:48.53:531,49,0	1/1:7,4:11:24.87:233,25,0	0/0:9,0:9:20.95:0,21,177	0/0:19,0:19:44.98:0,45,416	0/0:14,0:14:20.95:0,21,181	0/0:12,0:12:30.02:0,30,280	0/0:18,0:18:41.95:0,42,374	1/1:9,12:22:44.86:451,45,0	0/1:3,0:3:10.99:11,0,49
chr10	107812223	.	TG	T	517.93	PASS	AB=0.950;AC=12;AF=0.214;AN=56;BaseQRankSum=7.621;DP=513;FS=0.988;HRun=10;HaplotypeScore=69.8471;InbreedingCoeff=0.6384;MQ=73.10;MQ0=7;MQRankSum=-1.093;QD=3.89;ReadPosRankSum=2.125;VQSLOD=-0.0124;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:74.96:0,75,751	0/0:6,0:6:18.03:0,18,190	0/0:45,0:15:20.43:0,20,163	0/0:27,0:13:9.77:0,10,64	0/0:21,1:22:1.63:0,2,353	0/0:17,0:17:23.01:0,23,368	0/0:17,0:17:31.02:0,31,361	1/1:23,0:23:17.69:131,18,0	0/0:16,0:16:26.50:0,26,370	0/0:18,0:19:1.31:0,1,270	0/0:19,1:20:4.25:0,4,341	0/0:9,0:9:16.87:0,17,85	0/0:19,0:19:6.48:0,6,240	0/0:10,0:10:22.82:0,23,208	0/0:16,0:17:41.86:0,42,420	0/1:18,0:18:9.73:10,0,404	0/1:24,3:27:27.91:28,0,456	0/0:20,1:21:21.56:0,22,414	1/1:12,0:12:17.43:101,17,0	1/1:19,0:19:34.31:193,34,0	1/1:12,0:12:19.03:112,19,0	0/0:12,0:12:14.86:0,15,189	0/0:23,0:23:41.76:0,42,439	0/0:13,0:13:11.38:0,11,178	0/0:15,0:15:31.75:0,32,295	0/0:15,1:16:10.02:0,10,307	1/1:22,0:22:12.40:118,12,0	0/0:4,0:4:11.87:0,12,102
chr10	107812500	.	C	CTAGG	1234.54	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.343;DP=720;FS=1.864;HRun=0;HaplotypeScore=126.4048;InbreedingCoeff=0.9604;MQ=69.98;MQ0=0;MQRankSum=-2.614;QD=44.09;ReadPosRankSum=0.119;VQSLOD=3.6666;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,114,1897	0/0:11,0:11:33.11:0,33,551	0/0:26,0:24:40.78:0,41,551	0/0:31,0:32:59.89:0,60,815	0/0:25,0:25:63.19:0,63,1022	0/0:24,0:24:60.20:0,60,996	0/0:23,0:23:63.21:0,63,1015	0/0:42,0:42:75.26:0,75,1241	0/0:25,0:25:57.19:0,57,946	0/0:30,0:30:60.19:0,60,982	0/0:21,0:21:57.18:0,57,932	1/1:6,21:28:54.90:1329,55,0	0/0:17,0:17:36.11:0,36,572	0/0:28,0:28:75.23:0,75,1208	0/0:32,0:32:87.28:0,87,1429	0/0:29,0:29:66.23:0,66,1095	0/0:15,0:15:36.12:0,36,600	0/0:11,0:11:18.06:0,18,298	0/0:25,0:25:48.16:0,48,797	0/0:13,0:13:24.08:0,24,397	0/0:63,0:63:99:0,156,2525	0/0:15,0:15:42.13:0,42,677	0/0:19,0:19:45.15:0,45,755	0/0:30,0:30:69.21:0,69,1122	0/0:17,0:17:45.14:0,45,713	0/0:27,0:27:51.17:0,51,855	0/0:29,0:29:60.20:0,60,993	0/0:5,0:5:12.04:0,12,201
chr10	107814328	.	T	TG	371.12	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.337;DP=499;FS=3.239;HRun=6;HaplotypeScore=58.3780;InbreedingCoeff=0.9643;MQ=69.56;MQ0=2;MQRankSum=1.616;QD=23.20;ReadPosRankSum=-0.325;VQSLOD=2.9696;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:42.79:0,43,525	0/0:6,0:6:18.01:0,18,174	0/0:38,0:26:22.26:0,22,455	0/0:28,0:18:37.22:0,37,313	0/0:20,0:20:48.10:0,48,489	0/0:25,0:25:66.14:0,66,670	0/0:16,0:16:36.07:0,36,362	0/0:28,0:28:72.14:0,72,720	0/0:18,0:18:51.12:0,51,520	0/0:8,0:8:21.05:0,21,214	0/0:11,0:11:27.03:0,27,266	1/1:2,13:16:38.91:466,39,0	0/0:17,0:17:48.07:0,48,475	0/0:11,0:11:30.07:0,30,305	0/0:19,0:19:51.11:0,51,520	0/0:11,0:11:33.07:0,33,336	0/0:30,0:30:79.87:0,80,719	0/0:16,0:17:42.09:0,42,423	0/0:19,0:19:54.09:0,54,536	0/0:10,0:10:21:0,21,195	0/0:23,0:23:63.14:0,63,641	0/0:10,0:10:24.04:0,24,236	0/0:11,0:11:32.87:0,33,308	0/0:21,1:22:16.70:0,17,475	0/0:14,0:14:32.50:0,32,299	0/0:18,0:18:51.02:0,51,500	0/0:19,0:19:48.11:0,48,490	0/0:10,0:10:24.05:0,24,245
chr10	107814548	.	GGTGTGTGTGTGTGTGTGT	G	375.70	PASS	AB=0.878;AC=5;AF=0.100;AN=50;BaseQRankSum=2.848;DP=387;FS=2.351;HRun=0;HaplotypeScore=160.7971;InbreedingCoeff=0.1156;MQ=57.35;MQ0=18;MQRankSum=-2.836;QD=5.87;ReadPosRankSum=-1.121;VQSLOD=2.4945;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:33.03:0,33,1382	./.	./.	./.	0/0:18,0:18:18.03:0,18,659	0/0:15,0:14:9.03:0,9,506	0/0:11,0:9:2.61:0,3,129	0/0:23,0:21:4.12:0,4,19	0/0:8,0:7:15.03:0,15,627	0/0:9,0:8:12.04:0,12,444	0/0:15,0:15:8.08:0,8,327	1/1:11,0:13:3.01:125,3,0	0/0:7,0:7:11.94:0,12,391	0/0:11,0:10:15.02:0,15,616	0/0:10,0:9:15.05:0,15,1106	0/0:10,0:10:14.97:0,15,663	0/0:15,0:16:18.06:0,18,844	0/0:9,0:9:15.05:0,15,1024	0/0:15,0:14:3:0,3,27	0/1:8,6:14:15.93:279,0,16	0/1:21,0:17:4.97:5,0,73	0/0:6,0:6:12.04:0,12,727	0/0:10,0:10:24.03:0,24,956	0/0:16,0:15:21.03:0,21,1263	0/0:10,0:10:9.02:0,9,259	0/0:19,0:18:30.08:0,30,1341	0/1:13,0:14:69.84:70,0,144	0/0:5,0:5:11.99:0,12,505
chr10	107816778	.	CAAAAAAAA	C	3744.28	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=10.559;DP=482;FS=4.047;HRun=14;HaplotypeScore=127.7414;InbreedingCoeff=0.8169;MQ=64.81;MQ0=1;MQRankSum=-9.775;QD=30.94;ReadPosRankSum=2.946;VQSLOD=1.6119;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:46:99:0,132,5021	0/0:4,0:7:12.04:0,12,374	0/1:12,0:10:21.83:22,0,406	0/1:13,0:7:3.19:3,0,33	0/0:21,0:22:56.67:0,57,2136	0/0:12,0:15:39.13:0,39,1502	0/0:15,0:19:54.17:0,54,1904	1/1:4,17:21:51.07:1089,51,0	0/0:16,0:16:45.14:0,45,1703	0/0:12,0:12:27.09:0,27,1057	0/0:26,0:27:66.22:0,66,2481	1/1:1,0:8:15.05:239,15,0	0/0:16,0:17:39.09:0,39,1434	0/0:19,0:20:54.19:0,54,2161	0/0:8,0:9:21.07:0,21,838	0/0:9,0:11:27.09:0,27,1083	0/0:26,0:32:85.17:0,85,3085	0/0:15,0:18:51.18:0,51,1974	1/1:5,8:11:18:433,18,0	1/1:0,15:15:36.06:805,36,0	1/1:8,12:20:9.97:285,10,0	0/0:11,0:13:33.11:0,33,1247	0/0:16,0:16:48.15:0,48,1761	0/0:18,0:19:51.18:0,51,2146	0/0:15,0:18:51.17:0,51,1797	0/0:14,0:17:39.13:0,39,1488	1/1:3,15:18:36.07:867,36,0	0/0:5,0:7:21.07:0,21,804
chr10	107816982	.	ATTG	A	415.20	PASS	AB=0.992;AC=6;AF=0.107;AN=56;BaseQRankSum=3.450;DP=684;FS=0.000;HRun=0;HaplotypeScore=107.4658;InbreedingCoeff=0.2762;MQ=68.00;MQ0=0;MQRankSum=-0.734;QD=3.30;ReadPosRankSum=-2.644;VQSLOD=1.4516;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:93.30:0,93,1777	1/1:1,17:18:35.74:478,36,0	0/0:34,0:32:54.94:0,55,830	0/0:15,0:15:14.29:0,14,377	0/0:33,0:33:78.14:0,78,1344	0/0:18,0:18:48.15:0,48,908	0/0:23,0:23:45.15:0,45,864	0/1:31,0:31:5.66:6,0,473	0/0:25,0:25:66.14:0,66,1226	0/0:36,0:36:57.26:0,57,1503	0/0:16,0:16:42.14:0,42,809	0/0:24,0:24:45.05:0,45,783	0/0:20,0:20:57.17:0,57,1056	0/0:17,0:17:48.15:0,48,909	0/0:20,0:20:42.14:0,42,819	0/0:32,0:32:81.24:0,81,1521	0/0:23,0:23:51.15:0,51,903	0/0:13,0:13:36.02:0,36,562	0/1:22,0:22:8.59:9,0,434	0/1:30,1:31:27.39:27,0,675	0/0:18,0:18:16.65:0,17,478	0/0:30,0:30:71.41:0,71,1258	0/0:34,0:34:25.78:0,26,1142	0/0:24,0:24:63.18:0,63,1186	0/0:26,0:26:66.23:0,66,1317	0/0:20,0:20:54.18:0,54,1029	0/1:24,0:24:19.35:19,0,461	0/0:22,0:22:42.09:0,42,734
chr10	107818152	.	T	TTTG	11157.63	PASS	AB=0.952;AC=15;AF=0.268;AN=56;BaseQRankSum=-11.139;DP=679;FS=3.201;HRun=0;HaplotypeScore=89.1330;InbreedingCoeff=0.9093;MQ=82.25;MQ0=0;MQRankSum=-5.760;QD=52.88;ReadPosRankSum=-4.018;VQSLOD=5.9152;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.22:0,63,1047	1/1:0,15:15:42.14:951,42,0	0/0:21,0:21:60.20:0,60,979	0/0:21,0:21:57.19:0,57,910	0/0:39,0:39:99:0,114,1847	0/0:28,0:28:78.27:0,78,1294	0/0:22,0:22:66.23:0,66,1095	1/1:9,43:51:99:3172,150,0	0/0:19,0:19:54.18:0,54,894	0/0:27,0:27:75.26:0,75,1249	0/0:32,0:32:90.30:0,90,1475	1/1:2,14:16:45.11:967,45,0	0/0:17,0:17:48.16:0,48,800	0/1:19,1:20:16.84:17,0,725	0/0:31,0:31:90.31:0,90,1500	0/0:23,0:23:69.24:0,69,1144	0/0:17,0:17:51.16:0,51,824	0/0:7,0:7:18.04:0,18,273	1/1:3,14:17:42.13:883,42,0	1/1:3,27:31:87.18:1793,87,0	1/1:6,15:21:35.86:1094,36,0	0/0:31,0:31:93.30:0,93,1522	0/0:17,0:17:48.15:0,48,774	0/0:20,0:20:60.21:0,60,996	0/0:21,0:21:63.22:0,63,1048	0/0:34,0:34:81.28:0,81,1335	1/1:2,35:38:99:2282,102,0	0/0:19,0:19:57.19:0,57,950
chr10	107818267	.	A	AC	735.40	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.452;DP=699;FS=0.000;HRun=6;HaplotypeScore=66.1639;InbreedingCoeff=0.9958;MQ=56.36;MQ0=12;MQRankSum=2.498;QD=26.26;ReadPosRankSum=-0.811;VQSLOD=3.4494;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:72.14:0,72,727	0/0:7,0:7:21.05:0,21,214	0/0:31,0:16:44.39:0,44,405	0/0:31,0:23:56.29:0,56,591	0/0:22,0:21:54.12:0,54,550	0/0:19,0:19:42.09:0,42,429	0/0:25,0:25:69.16:0,69,704	0/0:39,0:36:93.21:0,93,949	0/0:24,0:24:69.15:0,69,699	0/0:21,0:21:60.11:0,60,601	0/0:22,0:22:63.13:0,63,636	1/1:2,26:28:66.21:830,66,0	0/0:24,0:24:72.16:0,72,734	0/0:21,0:21:54.12:0,54,550	0/0:27,0:27:75.15:0,75,759	0/0:25,0:25:75.15:0,75,758	0/0:31,0:31:86:0,86,862	0/0:28,0:28:72.16:0,72,734	0/0:29,0:27:78.17:0,78,796	0/0:17,0:17:42:0,42,410	0/0:27,0:27:69.12:0,69,691	0/0:16,0:16:41.90:0,42,401	0/0:19,0:19:57.12:0,57,575	0/0:19,0:19:42.05:0,42,417	0/0:18,0:18:48:0,48,475	0/0:41,0:40:99:0,114,1151	0/0:37,0:37:99:0,102,1029	0/0:23,0:23:42.03:0,42,411
chr10	107819132	.	C	CGT	217.92	PASS	AB=0.928;AC=18;AF=0.360;AN=50;BaseQRankSum=3.740;DP=543;FS=3.493;HRun=0;HaplotypeScore=95.7589;InbreedingCoeff=0.4335;MQ=60.63;MQ0=10;MQRankSum=-2.794;QD=0.90;ReadPosRankSum=-2.008;VQSLOD=1.7186;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:2.73:0,3,19	1/1:7,0:7:6:54,6,0	./.	./.	0/0:19,0:19:17.48:0,17,112	0/0:19,0:19:5.43:0,5,136	0/0:26,0:26:14.83:0,15,128	0/1:14,0:13:0:1,0,0	0/0:8,0:9:2.84:0,3,14	0/0:23,0:23:3.58:0,4,44	1/1:11,0:11:1.55:4,2,0	0/1:15,0:13:0:0,0,0	0/0:16,0:16:14.74:0,15,147	0/0:31,0:31:23.79:0,24,222	0/0:12,0:12:8.86:0,9,78	0/0:17,0:17:6.02:0,6,63	0/0:28,0:28:11.92:0,12,97	0/1:16,7:25:35.07:35,0,52	1/1:22,0:20:5.83:33,6,0	1/1:6,0:6:2.99:23,3,0	1/1:68,0:65:2.24:9,2,0	0/0:8,0:8:2.80:0,3,13	0/0:10,0:10:8.90:0,9,59	0/1:31,1:39:17.05:17,0,191	0/0:15,0:15:4.82:0,5,33	1/1:21,0:21:20.77:148,21,0	1/1:15,0:14:8.28:39,8,0	./.
chr10	107819182	.	TGGC	T	730.22	PASS	AB=0.962;AC=10;AF=0.179;AN=56;BaseQRankSum=7.097;DP=480;FS=7.170;HRun=0;HaplotypeScore=70.1334;InbreedingCoeff=0.6344;MQ=56.12;MQ0=26;MQRankSum=-5.118;QD=8.02;ReadPosRankSum=-2.268;VQSLOD=1.4267;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:54.05:0,54,960	0/0:7,0:7:11.77:0,12,168	0/0:4,0:1:3.01:0,3,31	0/1:9,0:3:14.36:44,0,14	0/0:19,0:19:54.08:0,54,974	0/0:20,0:19:50.21:0,50,822	0/0:33,0:32:81.33:0,81,1548	1/1:1,8:10:27.09:422,27,0	0/0:16,0:14:33.10:0,33,620	0/0:20,0:19:51.13:0,51,932	0/0:7,0:7:12.03:0,12,230	0/0:14,0:10:8.14:0,8,36	0/0:18,0:18:39.06:0,39,657	0/0:26,0:25:62.33:0,62,1038	0/0:14,0:14:29.68:0,30,508	0/0:19,0:17:38.79:0,39,693	0/0:23,0:21:58.02:0,58,1160	0/0:28,0:26:52.42:0,52,977	1/1:4,5:7:18.01:243,18,0	1/1:8,1:5:2.97:20,3,0	1/1:25,15:32:3.47:27,3,0	0/0:7,0:7:18.06:0,18,340	0/0:6,0:6:15.05:0,15,331	0/0:49,0:48:96.30:0,96,1773	0/0:14,0:14:33.58:0,34,658	0/0:17,0:17:38.74:0,39,664	0/1:11,1:10:5.52:125,0,6	0/0:6,0:6:18.06:0,18,334
chr10	107820444	.	C	CTG	2384.55	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=1.997;DP=769;FS=15.827;HRun=0;HaplotypeScore=126.7572;InbreedingCoeff=0.7403;MQ=66.17;MQ0=4;MQRankSum=-4.929;QD=13.55;ReadPosRankSum=-3.229;VQSLOD=2.0454;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:75.92:0,76,860	0/1:17,0:17:53.26:53,0,207	0/0:30,0:18:33.05:0,33,378	0/0:38,0:21:19.44:0,19,157	0/0:26,0:27:56.81:0,57,622	0/0:26,0:26:56.62:0,57,689	0/0:32,0:32:69.16:0,69,814	1/1:35,4:39:24.14:682,24,0	0/0:17,0:19:29.75:0,30,481	0/0:27,0:27:57.17:0,57,690	0/0:20,0:22:0.86:0,1,440	1/1:20,0:20:3.46:24,3,0	0/0:24,0:24:11.79:0,12,631	0/0:20,1:21:5.57:0,6,532	0/0:27,0:27:74.94:0,75,859	0/0:26,0:26:51.16:0,51,617	0/0:32,0:35:77.36:0,77,839	0/0:28,0:30:60.30:0,60,694	0/1:18,0:17:0.27:419,0,0	1/1:22,9:30:22.84:510,23,0	1/1:27,3:29:30.10:449,30,0	0/0:28,0:28:60.17:0,60,713	0/0:22,0:22:48.05:0,48,554	0/0:45,0:45:99:0,111,1328	0/0:20,0:20:51.16:0,51,618	0/0:30,0:30:65.87:0,66,738	1/1:18,3:20:34.58:420,35,0	0/0:25,0:25:63.14:0,63,724
chr10	107823686	.	T	TAC	5294.74	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-11.073;DP=715;FS=6.152;HRun=0;HaplotypeScore=93.0161;InbreedingCoeff=0.9991;MQ=75.93;MQ0=5;MQRankSum=-1.034;QD=36.77;ReadPosRankSum=-2.192;VQSLOD=5.7445;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,121,1515	0/0:8,0:8:24.08:0,24,299	0/0:43,0:32:60.22:0,60,773	0/0:47,0:37:63.64:0,64,683	0/0:29,0:29:78.25:0,78,984	0/0:24,0:24:63.19:0,63,778	0/0:13,0:13:33.11:0,33,416	1/1:8,28:37:86.83:1380,87,0	0/0:17,0:17:42.13:0,42,529	0/0:28,0:30:58.04:0,58,946	0/0:21,0:21:60.19:0,60,755	0/0:24,0:24:63.19:0,63,780	0/0:21,0:21:54.17:0,54,681	0/0:27,0:27:78.21:0,78,966	0/0:25,0:25:66.21:0,66,831	0/0:16,0:16:45.14:0,45,567	0/0:26,0:26:63.20:0,63,795	0/0:19,0:19:45.14:0,45,566	1/1:3,16:19:51.13:811,51,0	1/1:1,14:16:33.11:548,33,0	1/1:4,32:36:78.27:1297,78,0	0/0:23,0:23:60.19:0,60,756	0/0:28,0:28:72.23:0,72,909	0/0:17,0:17:45.14:0,45,567	0/0:22,0:22:63.16:0,63,775	0/0:34,0:34:90.28:0,90,1124	1/1:4,31:36:43.61:1259,44,0	0/0:11,0:11:27.09:0,27,341
chr10	107825109	.	TGC	T	319.48	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.566;DP=608;FS=5.174;HRun=0;HaplotypeScore=75.2706;InbreedingCoeff=0.9985;MQ=86.71;MQ0=0;MQRankSum=-1.695;QD=29.04;ReadPosRankSum=3.584;VQSLOD=5.1913;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,2275	1/1:0,11:11:27.09:414,27,0	0/0:20,0:20:53.88:0,54,1078	0/0:21,0:21:60.17:0,60,1111	0/0:17,0:17:48.16:0,48,975	0/0:26,0:26:78.27:0,78,1556	0/0:20,0:20:57.20:0,57,1158	0/0:32,0:32:89.79:0,90,1757	0/0:21,0:21:63.19:0,63,1242	0/0:29,0:29:87.30:0,87,1719	0/0:12,0:12:36.12:0,36,731	0/0:18,0:18:54.18:0,54,1076	0/0:19,0:19:57.20:0,57,1157	0/0:25,0:25:72.25:0,72,1463	0/0:19,0:19:57.20:0,57,1128	0/0:19,0:19:57.20:0,57,1158	0/0:28,0:28:84.29:0,84,1707	0/0:19,0:19:57.17:0,57,1093	0/0:22,0:22:66.22:0,66,1297	0/0:20,0:20:54.19:0,54,1086	0/0:40,0:40:99:0,117,2294	0/0:12,0:12:33.11:0,33,668	0/0:20,0:20:60.19:0,60,1171	0/0:18,0:18:54.19:0,54,1097	0/0:26,0:26:78.26:0,78,1528	0/0:27,0:27:81.27:0,81,1592	0/0:16,0:16:48.14:0,48,922	0/0:13,0:13:39.08:0,39,682
chr10	107825128	.	GCA	G	612.09	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.122;DP=582;FS=0.994;HRun=0;HaplotypeScore=70.5456;InbreedingCoeff=0.9988;MQ=80.96;MQ0=0;MQRankSum=-1.472;QD=38.26;ReadPosRankSum=2.864;VQSLOD=5.2237;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,2139	0/0:10,0:10:30.10:0,30,562	0/0:18,0:18:47.85:0,48,877	0/0:12,0:12:31.31:0,31,488	0/0:21,0:21:63.22:0,63,1171	0/0:25,0:25:75.26:0,75,1396	0/0:21,0:21:60.21:0,60,1124	0/0:37,0:37:99:0,108,1926	0/0:22,0:22:63.22:0,63,1165	0/0:24,0:24:66.23:0,66,1235	0/0:13,0:13:39.13:0,39,726	1/1:0,16:16:48.16:707,48,0	0/0:17,0:17:48.15:0,48,863	0/0:24,0:24:72.23:0,72,1308	0/0:17,0:17:51.17:0,51,955	0/0:15,0:15:42.14:0,42,786	0/0:28,0:28:84.27:0,84,1540	0/0:20,0:20:54.19:0,54,999	0/0:26,0:26:78.27:0,78,1458	0/0:23,0:23:69.22:0,69,1261	0/0:25,0:25:72.25:0,72,1313	0/0:12,0:12:36.12:0,36,674	0/0:21,0:21:63.20:0,63,1148	0/0:13,0:13:39.13:0,39,730	0/0:27,0:27:81.28:0,81,1510	0/0:23,0:23:66.23:0,66,1216	0/0:16,0:16:48.16:0,48,891	0/0:17,0:17:51.17:0,51,932
chr10	107825679	.	TTC	T	876.79	PASS	AB=0.794;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.253;DP=503;FS=5.229;HRun=0;HaplotypeScore=62.9211;InbreedingCoeff=0.4561;MQ=45.29;MQ0=67;MQRankSum=-0.087;QD=12.71;ReadPosRankSum=-0.012;VQSLOD=2.8900;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:24:54.51:0,55,532	0/0:2,0:2:6.01:0,6,58	0/0:16,0:2:6.01:0,6,58	0/0:15,0:3:9.01:0,9,84	0/0:23,0:15:31.36:0,31,274	0/0:19,0:17:43.23:0,43,389	0/0:24,0:19:51.01:0,51,481	0/1:11,8:13:82.32:200,0,82	0/0:12,0:10:30.05:0,30,310	0/0:17,0:15:45.06:0,45,427	0/0:23,0:20:48.08:0,48,483	0/0:15,0:10:27.04:0,27,260	0/0:26,0:23:68.99:0,69,643	0/0:11,0:9:21.03:0,21,202	0/0:15,0:14:39:0,39,364	0/0:16,0:15:36.94:0,37,348	0/0:34,0:28:56.48:0,56,625	0/0:13,0:10:27.04:0,27,258	0/1:10,9:13:26.07:222,0,26	1/1:2,8:7:18.06:213,18,0	0/1:5,0:4:19.93:62,0,20	0/0:11,0:10:20.85:0,21,177	0/0:14,0:13:33.26:0,33,309	0/0:33,0:26:63.94:0,64,595	0/0:20,0:17:36.21:0,36,408	0/0:29,0:23:65.82:0,66,591	1/1:16,0:14:27.08:320,27,0	0/0:14,0:11:20.95:0,21,190
chr10	107825681	.	C	CT	945.74	PASS	AB=0.887;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.132;DP=491;FS=6.516;HRun=7;HaplotypeScore=57.0607;InbreedingCoeff=0.4551;MQ=46.08;MQ0=56;MQRankSum=-0.613;QD=13.51;ReadPosRankSum=-0.730;VQSLOD=2.5734;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:24:54.03:0,54,508	0/0:2,0:2:6.01:0,6,58	0/0:16,0:2:6.01:0,6,58	0/0:15,0:3:9.01:0,9,84	0/0:23,0:16:36.04:0,36,338	0/0:19,0:18:41.98:0,42,386	0/0:24,0:20:53.94:0,54,505	0/1:20,0:14:78.73:233,0,79	0/0:11,0:10:30.05:0,30,288	0/0:17,0:15:45.05:0,45,423	0/0:23,0:20:48.07:0,48,462	0/0:14,0:10:27.04:0,27,260	0/0:26,0:23:66.07:0,66,627	0/0:11,0:9:21.03:0,21,202	0/0:15,0:14:36.05:0,36,346	0/0:15,0:14:36.06:0,36,347	0/0:32,0:28:52.94:0,53,603	0/0:12,0:10:27.03:0,27,255	0/1:17,0:13:24.85:223,0,25	1/1:11,0:9:21.06:249,21,0	0/1:3,2:4:19.92:62,0,20	0/0:11,0:10:14.99:0,15,144	0/0:13,0:13:27.04:0,27,258	0/0:31,0:26:63.08:0,63,595	0/0:19,0:16:44.94:0,45,419	0/0:29,0:23:57.02:0,57,540	1/1:4,12:14:27.08:320,27,0	0/0:13,0:11:18.02:0,18,173
chr10	107825834	.	GT	G	5203.92	PASS	AB=0.573;AC=50;AF=0.962;AN=52;BaseQRankSum=0.289;DP=282;FS=15.337;HRun=1;HaplotypeScore=54.9947;InbreedingCoeff=-0.0938;MQ=24.12;MQ0=46;MQRankSum=-0.065;QD=18.99;ReadPosRankSum=-0.494;VQSLOD=3.5315;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,9:6:3.01:42,3,0	1/1:2,4:4:3.01:42,3,0	./.	./.	1/1:0,6:6:3.01:42,3,0	1/1:2,13:13:20.90:265,21,0	1/1:2,11:7:12.04:167,12,0	0/1:2,7:8:23.84:230,0,24	1/1:2,5:5:15.05:209,15,0	1/1:1,9:8:15.05:209,15,0	1/1:2,6:6:8.64:124,9,0	1/1:2,3:3:8.99:103,9,0	1/1:1,13:12:33.11:459,33,0	1/1:1,6:6:9.03:125,9,0	1/1:2,9:9:12:145,12,0	1/1:0,11:10:21.03:271,21,0	1/1:10,18:18:39.13:544,39,0	1/1:4,13:10:15.02:209,15,0	0/1:2,5:6:32.74:152,0,33	1/1:2,5:5:15.05:209,15,0	1/1:3,10:8:6.02:84,6,0	1/1:0,5:4:6.02:84,6,0	1/1:1,9:9:17.97:205,18,0	1/1:2,7:6:9.03:125,9,0	1/1:3,16:15:24.08:334,24,0	1/1:1,11:11:33.11:460,33,0	1/1:1,11:11:24.08:322,24,0	1/1:0,2:2:3.01:42,3,0
chr10	107825877	.	CCG	C	115.77	PASS	AB=0.985;AC=17;AF=0.304;AN=56;BaseQRankSum=6.358;DP=301;FS=13.715;HRun=0;HaplotypeScore=48.2740;InbreedingCoeff=-0.1600;MQ=61.15;MQ0=11;MQRankSum=-4.821;QD=0.74;ReadPosRankSum=6.642;VQSLOD=-0.5327;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,2:16:14.03:14,0,40	0/0:2,0:1:2.97:0,3,20	0/0:24,0:12:21.34:0,21,197	0/1:13,0:4:11.18:11,0,31	0/0:5,0:5:8.91:0,9,63	0/1:9,0:9:13.76:14,0,41	0/0:9,0:7:10.52:0,11,51	0/0:8,0:7:11.64:0,12,84	0/1:12,0:12:0.46:0,0,56	0/1:9,0:8:15.19:15,0,55	0/0:8,0:9:0.32:0,0,39	0/0:10,0:9:23.82:0,24,176	0/1:10,0:10:8.52:9,0,57	0/0:8,0:8:5.07:0,5,70	0/1:5,0:5:1.03:1,0,29	0/1:7,0:6:6.08:6,0,56	0/1:31,0:30:63.59:64,0,79	0/0:26,0:23:43.91:0,44,349	0/1:8,1:6:12.03:12,0,70	0/0:5,0:5:8.57:0,9,69	0/0:15,1:12:0.96:0,1,28	1/1:4,0:3:1.82:5,2,0	0/1:4,0:4:1.49:1,0,14	0/0:10,0:8:8.88:0,9,59	0/0:13,0:13:21.31:0,21,163	0/1:12,0:12:24.80:25,0,102	0/1:11,0:10:3.96:51,0,4	1/1:1,0:1:2.99:24,3,0
chr10	107826364	.	CAA	C	6265.29	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=15.139;DP=770;FS=13.239;HRun=3;HaplotypeScore=97.2045;InbreedingCoeff=0.9999;MQ=85.09;MQ0=0;MQRankSum=-0.345;QD=42.91;ReadPosRankSum=-0.695;VQSLOD=3.3153;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,2355	0/0:10,0:10:30.10:0,30,580	0/0:34,0:34:85.90:0,86,1723	0/0:24,0:24:68.79:0,69,1140	0/0:28,0:28:84.29:0,84,1622	0/0:32,0:32:90.27:0,90,1695	0/0:18,0:18:51.17:0,51,985	1/1:0,36:36:99:1627,108,0	0/0:18,0:18:54.19:0,54,1043	0/0:37,0:37:99:0,108,2053	0/0:23,0:23:66.17:0,66,1161	0/0:27,0:27:81.28:0,81,1565	0/0:21,0:21:60.21:0,60,1151	0/0:26,0:26:78.27:0,78,1484	0/0:31,0:31:93.30:0,93,1734	0/0:31,0:31:90.30:0,90,1702	0/0:29,0:28:81.23:0,81,1463	0/0:15,0:15:45.13:0,45,832	1/1:2,19:21:57.19:873,57,0	1/1:0,35:35:99:1561,102,0	1/1:1,20:21:57.19:873,57,0	0/0:31,0:31:93.32:0,93,1787	0/0:35,0:35:99:0,102,1899	0/0:23,0:23:66.23:0,66,1275	0/0:28,0:28:84.29:0,84,1623	0/0:35,0:35:99:0,105,1968	1/1:0,33:33:87.30:1332,87,0	0/0:26,0:26:75.73:0,76,1449
chr10	107826742	.	C	CAT	7588.65	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-1.485;DP=734;FS=0.000;HRun=0;HaplotypeScore=92.4089;InbreedingCoeff=0.9728;MQ=74.47;MQ0=0;MQRankSum=0.354;QD=39.52;ReadPosRankSum=-1.830;VQSLOD=6.0988;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.18:0,75,930	1/1:2,6:8:12.04:202,12,0	0/0:18,0:17:15.51:0,16,180	0/0:15,0:15:11.03:0,11,138	0/0:43,0:43:99:0,99,1259	0/0:22,0:22:60.15:0,60,730	0/0:19,0:19:45.12:0,45,563	1/1:8,30:38:90.29:1489,90,0	0/0:30,0:30:84.26:0,84,1067	0/0:35,0:35:90.29:0,90,1158	0/0:33,0:33:81.23:0,81,1013	1/1:1,20:23:60.21:1006,60,0	0/0:28,0:28:66.20:0,66,835	0/0:33,0:33:87.27:0,87,1104	0/0:17,0:17:48.16:0,48,618	0/0:35,0:35:96.30:0,96,1221	0/0:18,0:18:48.16:0,48,617	0/0:17,0:17:51.15:0,51,642	1/1:3,12:16:39.10:629,39,0	1/1:5,38:44:99:1884,114,0	1/1:2,25:27:63.22:1063,63,0	0/0:20,0:20:8.30:0,8,574	0/0:18,0:18:51.17:0,51,656	0/0:25,0:25:72.23:0,72,926	0/0:31,0:31:84.25:0,84,1065	0/0:37,0:37:99:0,105,1339	1/1:4,32:36:78.27:1316,78,0	0/0:23,0:23:54.18:0,54,695
chr10	107829646	.	T	TA	1087.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.106;DP=623;FS=1.527;HRun=2;HaplotypeScore=58.2949;InbreedingCoeff=0.9993;MQ=79.39;MQ0=0;MQRankSum=-2.413;QD=35.08;ReadPosRankSum=-0.347;VQSLOD=3.6877;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.18:0,60,731	0/0:11,0:11:33.08:0,33,393	0/0:18,0:18:45.11:0,45,515	0/0:15,0:14:36.09:0,36,423	1/1:1,30:31:84.21:1182,84,0	0/0:24,0:24:72.18:0,72,844	0/0:20,0:20:57.09:0,57,686	0/0:44,0:44:99:0,129,1520	0/0:18,0:18:54.15:0,54,654	0/0:30,0:30:90.23:0,90,1072	0/0:23,0:23:69.19:0,69,830	0/0:22,0:22:63.09:0,63,752	0/0:12,0:12:36.10:0,36,434	0/0:19,0:19:51.15:0,51,616	0/0:27,0:27:69.21:0,69,855	0/0:19,0:19:54.16:0,54,657	0/0:13,0:13:39.10:0,39,469	0/0:18,0:18:51.16:0,51,632	0/0:29,0:29:78.19:0,78,892	0/0:39,0:39:99:0,111,1335	0/0:13,0:13:39.12:0,39,483	0/0:25,0:25:75.12:0,75,871	0/0:31,0:31:90.22:0,90,1074	0/0:14,0:14:39.08:0,39,445	0/0:17,0:17:51.16:0,51,631	0/0:25,0:25:69.19:0,69,822	0/0:29,0:29:84.23:0,84,1004	0/0:16,0:16:48.14:0,48,581
chr10	107830068	.	G	GTCAAGGC	10249.27	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-0.829;DP=718;FS=3.560;HRun=0;HaplotypeScore=163.1959;InbreedingCoeff=0.9919;MQ=75.67;MQ0=0;MQRankSum=-14.761;QD=82.66;ReadPosRankSum=-4.310;VQSLOD=4.3956;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,141,3502	0/0:4,0:4:12.04:0,12,324	0/0:20,0:19:49.03:0,49,1047	0/0:23,0:23:53.79:0,54,1207	0/0:20,0:20:57.20:0,57,1537	0/0:31,0:31:93.31:0,93,2361	0/0:35,0:35:99:0,102,2618	1/1:17,17:34:87.24:3006,87,0	0/0:16,0:16:48.16:0,48,1248	0/0:25,0:25:75.25:0,75,1967	0/0:22,0:22:66.21:0,66,1707	0/0:31,0:31:93.30:0,93,2414	0/0:19,0:19:57.20:0,57,1537	0/0:32,0:32:96.33:0,96,2544	0/0:26,0:26:78.27:0,78,2040	0/0:21,0:21:63.20:0,63,1643	0/0:47,0:47:99:0,141,3640	0/0:24,0:24:60.21:0,60,1597	1/1:13,9:23:60.17:2040,60,0	1/1:6,13:24:57.19:1839,57,0	1/1:8,11:21:42.14:1108,42,0	0/0:31,0:31:93.32:0,93,2429	0/0:22,0:22:63.22:0,63,1659	0/0:35,0:35:99:0,99,2602	0/0:17,0:17:51.15:0,51,1292	0/0:35,0:35:99:0,102,2524	1/1:2,18:21:57.20:2256,57,0	0/0:7,0:7:21.07:0,21,461
chr10	107830340	.	C	CGTGTTGATGGATGGCTAGGT	7368.09	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=1.701;DP=813;FS=18.787;HRun=0;HaplotypeScore=405.7966;InbreedingCoeff=0.9321;MQ=76.15;MQ0=0;MQRankSum=-8.515;QD=38.38;ReadPosRankSum=-8.589;VQSLOD=1.1782;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:84.26:0,84,3802	0/0:10,0:10:15.05:0,15,636	0/0:20,0:20:29.75:0,30,615	0/0:17,0:16:14.77:0,15,259	0/0:25,0:25:45.13:0,45,1688	0/0:30,0:30:69.21:0,69,3558	0/0:34,0:34:66.17:0,66,2453	1/1:46,0:46:90.29:3937,90,0	0/0:34,0:34:60.19:0,60,2765	0/0:29,0:29:45.09:0,45,1723	0/0:22,0:22:36.08:0,36,1371	0/0:44,0:44:99:0,105,4652	0/0:25,0:25:57.18:0,57,2615	0/0:33,0:33:84.29:0,84,3882	0/0:36,0:36:69.23:0,69,3253	0/0:24,0:24:42.13:0,42,1846	0/0:37,0:37:81.28:0,81,3756	0/0:19,0:19:45.07:0,45,1987	1/1:27,3:44:63.18:2327,63,0	1/1:19,0:19:10.23:320,10,0	1/1:54,0:54:38.50:505,39,0	0/0:21,0:21:45.14:0,45,1901	0/0:16,0:16:30.08:0,30,1392	0/0:36,0:36:84.29:0,84,4040	0/0:22,0:22:36.08:0,36,1600	0/0:34,0:34:69.14:0,69,3021	1/1:17,1:29:3.01:280,3,0	0/0:5,0:5:12.02:0,12,347
chr10	107832020	.	T	TA	2569.45	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.472;DP=466;FS=0.951;HRun=0;HaplotypeScore=56.1271;InbreedingCoeff=0.9813;MQ=74.93;MQ0=2;MQRankSum=-0.328;QD=27.05;ReadPosRankSum=-0.452;VQSLOD=3.8987;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.20:0,75,1009	0/0:9,0:9:27.09:0,27,377	0/0:16,0:12:33.09:0,33,413	0/0:23,0:18:33.33:0,33,427	0/0:22,0:22:66.20:0,66,881	0/0:16,0:16:48.14:0,48,634	0/0:12,0:12:36.11:0,36,477	1/1:4,21:26:61.72:714,62,0	0/0:9,0:9:27.08:0,27,357	0/0:26,0:26:75.25:0,75,1030	0/0:24,0:24:66.18:0,66,863	0/0:9,0:9:23.26:0,23,130	0/0:18,0:18:51.16:0,51,698	0/0:10,0:10:27.08:0,27,362	0/0:19,0:19:54.16:0,54,724	0/0:14,0:14:42.13:0,42,570	0/0:17,0:17:51.17:0,51,712	0/0:21,0:21:60.17:0,60,811	1/1:3,15:18:44.34:499,44,0	1/1:0,17:17:48.13:559,48,0	1/1:0,7:8:17.84:186,18,0	0/0:6,0:6:18.06:0,18,252	0/0:12,0:12:36.09:0,36,482	0/0:5,0:5:9.03:0,9,126	0/0:23,0:23:69.18:0,69,897	0/0:20,0:20:60.20:0,60,838	1/1:3,23:26:66.13:785,66,0	0/0:12,0:12:36.11:0,36,486
chr10	107832611	.	GTTT	G	1818.26	PASS	AB=0.833;AC=13;AF=0.232;AN=56;BaseQRankSum=2.780;DP=352;FS=2.586;HRun=13;HaplotypeScore=69.5733;InbreedingCoeff=0.8312;MQ=77.98;MQ0=4;MQRankSum=-2.317;QD=22.45;ReadPosRankSum=-0.012;VQSLOD=2.6551;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:21.05:0,21,370	1/1:0,1:1:3.01:36,3,0	0/0:24,0:11:24.02:0,24,306	0/0:28,0:21:27.80:0,28,353	0/0:10,0:13:33.05:0,33,496	0/0:10,0:10:30.10:0,30,545	0/0:9,0:10:27.07:0,27,484	1/1:5,13:18:36.04:437,36,0	0/0:5,0:5:12.04:0,12,204	0/0:14,0:15:39.09:0,39,676	0/0:13,0:16:42.12:0,42,743	0/1:4,0:5:9.72:10,0,28	0/0:2,0:3:9.01:0,9,137	0/0:11,0:11:30.09:0,30,543	0/0:6,0:6:15.05:0,15,269	0/0:4,0:4:12.04:0,12,229	0/0:22,0:24:66.20:0,66,1191	0/0:11,0:13:36.12:0,36,660	1/1:2,9:11:24.04:278,24,0	1/1:8,15:23:42:509,42,0	1/1:1,7:8:18.04:219,18,0	0/0:6,0:6:15.05:0,15,286	0/0:7,0:7:21.05:0,21,345	0/0:6,0:6:9.03:0,9,173	0/0:11,0:12:36.10:0,36,656	0/0:19,0:19:48.16:0,48,907	1/1:1,14:15:42.11:511,42,0	0/0:26,0:28:84.27:0,84,1505
chr10	107833375	.	TGCCGTGGGTCACAGAG	T	1312.81	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.495;DP=783;FS=2.614;HRun=0;HaplotypeScore=330.7158;InbreedingCoeff=0.9991;MQ=82.29;MQ0=0;MQRankSum=-4.621;QD=109.40;ReadPosRankSum=1.612;VQSLOD=3.0555;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,10163	1/1:1,11:12:30.10:1407,30,0	0/0:20,0:20:48.16:0,48,2695	0/0:22,0:22:44.48:0,44,2442	0/0:34,0:34:90.31:0,90,6411	0/0:17,0:17:48.16:0,48,3038	0/0:35,0:35:99:0,102,6576	0/0:18,0:18:47.71:0,48,3362	0/0:31,0:31:87.30:0,87,6226	0/0:34,0:34:99:0,99,7039	0/0:23,0:23:69.16:0,69,4797	0/0:32,0:32:96.33:0,96,5276	0/0:31,0:31:93.32:0,93,6540	0/0:34,0:34:96.33:0,96,6839	0/0:27,0:27:78.27:0,78,5866	0/0:33,0:33:96.33:0,96,7323	0/0:36,0:36:99:0,102,7513	0/0:24,0:24:69.24:0,69,5132	0/0:32,0:32:90.30:0,90,5923	0/0:23,0:23:66.23:0,66,4865	0/0:70,0:70:99:0,196,14240	0/0:18,0:18:51.18:0,51,3723	0/0:13,0:13:33.11:0,33,2543	0/0:32,0:32:96.24:0,96,7004	0/0:15,0:15:39.13:0,39,2878	0/0:23,0:23:69.24:0,69,4995	0/0:25,0:25:72.25:0,72,5639	0/0:24,0:24:66.23:0,66,4856
chr10	107835897	.	A	ATC	450.11	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.988;DP=625;FS=0.000;HRun=0;HaplotypeScore=84.2195;InbreedingCoeff=0.9815;MQ=86.78;MQ0=0;MQRankSum=0.063;QD=40.92;ReadPosRankSum=-2.071;VQSLOD=4.7306;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.26:0,81,1012	1/1:0,11:11:33.11:545,33,0	0/0:26,0:25:38.72:0,39,454	0/0:32,0:32:15.63:0,16,442	0/0:22,0:22:54.14:0,54,648	0/0:32,0:32:63.20:0,63,787	0/0:25,0:25:57.16:0,57,689	0/0:23,0:23:54.17:0,54,676	0/0:13,0:13:33.11:0,33,412	0/0:16,0:16:42.13:0,42,515	0/0:17,0:17:41.96:0,42,525	0/0:17,0:17:45.13:0,45,550	0/0:25,0:25:51.16:0,51,638	0/0:28,0:28:69.22:0,69,863	0/0:26,0:26:66.19:0,66,801	0/0:16,0:16:45.14:0,45,563	0/0:32,0:32:81.23:0,81,997	0/0:18,0:18:45.14:0,45,561	0/0:15,0:15:36.10:0,36,428	0/0:31,0:31:66.21:0,66,826	0/0:44,0:44:99:0,105,1314	0/0:21,0:21:51.16:0,51,638	0/0:18,0:18:45.14:0,45,563	0/0:16,0:16:42.13:0,42,525	0/0:14,0:14:39.10:0,39,473	0/0:26,0:26:69.22:0,69,863	0/0:22,0:23:50.97:0,51,599	0/0:7,0:7:21.07:0,21,263
chr10	107837860	.	C	CTTT	1935.84	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=6.044;DP=399;FS=6.679;HRun=8;HaplotypeScore=61.9644;InbreedingCoeff=0.8559;MQ=75.93;MQ0=5;MQRankSum=-2.712;QD=27.65;ReadPosRankSum=-2.913;VQSLOD=0.9358;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:54.15:0,54,710	1/1:2,0:6:4.98:11,5,0	0/0:49,0:25:14.70:0,15,360	0/0:34,0:14:9.74:0,10,128	0/0:13,0:13:27.06:0,27,354	0/0:12,0:12:33.06:0,33,389	0/0:4,0:4:9.03:0,9,118	1/1:10,14:26:45.11:781,45,0	0/0:10,0:10:27.09:0,27,354	0/0:10,0:9:27.08:0,27,342	0/0:16,0:15:41.50:0,41,520	1/1:1,0:4:5.98:46,6,0	0/0:2,0:2:6.02:0,6,79	0/0:7,0:7:21.04:0,21,246	0/0:4,0:4:12.03:0,12,143	0/0:8,0:8:21.05:0,21,276	0/0:37,0:37:99:0,111,1406	0/0:24,0:24:66.11:0,66,843	1/1:3,7:10:21.07:418,21,0	1/1:2,4:6:15.02:260,15,0	1/1:0,1:1:3.01:60,3,0	0/0:3,0:3:9:0,9,89	0/0:6,0:6:12.03:0,12,158	0/0:8,0:8:24.04:0,24,283	0/0:25,0:25:69.20:0,69,905	0/0:19,0:19:54.16:0,54,706	1/1:7,7:15:30.09:538,30,0	0/0:12,0:12:33.11:0,33,433
chr10	107839833	.	CTTG	C	4301.82	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.146;DP=592;FS=2.483;HRun=0;HaplotypeScore=85.0619;InbreedingCoeff=0.9998;MQ=81.15;MQ0=0;MQRankSum=-4.740;QD=35.55;ReadPosRankSum=-0.029;VQSLOD=5.3531;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.32:0,96,1988	0/0:13,0:13:36.12:0,36,795	0/0:18,0:18:34.23:0,34,873	0/0:16,0:16:39.10:0,39,759	0/0:23,0:23:60.10:0,60,1322	0/0:20,0:20:60.16:0,60,1214	0/0:15,0:15:45.10:0,45,898	1/1:3,24:27:66.11:1010,66,0	0/0:20,0:20:57.18:0,57,1190	0/0:16,0:16:45.63:0,46,995	0/0:15,0:15:42.04:0,42,801	0/0:33,0:33:90.31:0,90,1970	0/0:29,0:29:75.23:0,75,1587	0/0:22,0:22:66.22:0,66,1428	0/0:27,0:27:78.24:0,78,1616	0/0:28,0:28:84.26:0,84,1774	0/0:19,0:19:57.15:0,57,1173	0/0:14,0:14:42.14:0,42,938	1/1:5,12:17:39.12:602,39,0	1/1:2,22:24:51.10:788,51,0	1/1:3,16:19:33.04:493,33,0	0/0:17,0:17:48.05:0,48,886	0/0:14,0:14:36.12:0,36,770	0/0:24,0:24:63.22:0,63,1402	0/0:18,0:18:47.53:0,48,996	0/0:19,0:19:48.16:0,48,1047	1/1:3,31:34:87.30:1409,87,0	0/0:17,0:17:48.11:0,48,867
chr10	107841004	.	GCT	G	232.97	PASS	AB=1.000;AC=5;AF=0.139;AN=36;BaseQRankSum=4.355;DP=278;FS=0.000;HRun=0;HaplotypeScore=15.0869;InbreedingCoeff=0.4494;MQ=31.94;MQ0=62;MQRankSum=-4.035;QD=5.06;ReadPosRankSum=-3.784;VQSLOD=0.3066;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:6:6.02:0,6,122	0/0:4,0:1:3.01:0,3,61	./.	./.	./.	./.	0/0:28,0:11:33.11:0,33,670	1/1:2,2:2:6.02:88,6,0	0/0:11,0:8:15.05:0,15,305	./.	0/0:4,0:3:3.01:0,3,43	0/1:10,0:6:0.82:1,0,229	0/0:10,0:4:12.04:0,12,244	0/0:10,0:6:6.02:0,6,122	0/0:6,0:5:6.02:0,6,122	0/0:10,0:10:27.09:0,27,549	0/0:19,0:12:30.10:0,30,608	0/0:16,0:8:24.08:0,24,487	0/0:4,0:2:1.26:0,1,46	./.	1/1:20,12:11:15.05:244,15,0	0/0:5,0:3:3.01:0,3,55	./.	0/0:28,0:11:33.11:0,33,669	./.	0/0:13,0:6:18.06:0,18,365	./.	./.
chr10	107841435	.	GC	G	789.03	PASS	AB=0.863;AC=18;AF=0.333;AN=54;BaseQRankSum=0.890;DP=357;FS=5.527;HRun=10;HaplotypeScore=57.1285;InbreedingCoeff=0.3895;MQ=69.11;MQ0=2;MQRankSum=0.737;QD=5.19;ReadPosRankSum=0.198;VQSLOD=0.7875;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,2:15:3.27:0,3,206	./.	0/1:23,0:15:7.36:7,0,206	0/0:22,1:14:19.70:0,20,183	0/1:6,3:9:40.76:63,0,41	0/0:10,0:10:20.92:0,21,168	0/0:28,2:29:20.93:0,21,574	1/1:6,9:15:27.40:227,27,0	0/0:7,0:7:11.90:0,12,114	0/1:6,1:7:18.61:19,0,55	0/0:7,0:7:7.40:0,7,45	1/1:7,0:21:20.68:56,21,0	0/0:9,0:10:8.03:0,8,102	0/0:15,1:16:7.69:0,8,256	0/0:15,0:17:44.32:0,44,424	0/0:11,0:11:23.40:0,23,244	0/0:22,1:24:9.83:0,10,282	0/1:20,3:23:32.76:33,0,421	1/1:8,7:15:20.94:175,21,0	1/1:1,3:4:8.99:75,9,0	1/1:3,8:11:15:130,15,0	0/0:3,0:3:3:0,3,28	0/0:3,0:3:6.02:0,6,66	0/0:17,1:18:13.31:0,13,286	0/1:4,1:5:14.80:15,0,49	0/0:10,0:10:10.56:0,11,88	1/1:4,9:13:17.99:156,18,0	0/1:4,1:5:16.55:17,0,56
chr10	107841451	.	CGT	C	327.70	PASS	AB=0.925;AC=13;AF=0.260;AN=50;BaseQRankSum=2.837;DP=385;FS=4.909;HRun=0;HaplotypeScore=63.2756;InbreedingCoeff=-0.2259;MQ=58.72;MQ0=8;MQRankSum=2.207;QD=1.93;ReadPosRankSum=2.390;VQSLOD=1.0313;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,1:17:83.64:84,0,114	0/0:2,0:2:2.99:0,3,24	./.	./.	0/1:8,0:8:21.46:21,0,119	0/0:9,0:8:9.03:0,9,131	0/1:21,2:23:68.39:68,0,286	0/0:19,0:15:23.66:0,24,157	0/0:8,0:12:6.48:0,6,58	0/0:9,0:9:0.25:0,0,226	0/0:7,0:7:12.04:0,12,177	0/0:25,0:26:2.27:0,2,184	0/1:6,3:9:33.73:34,0,54	0/0:15,0:15:27.08:0,27,380	0/1:11,3:14:77.71:78,0,160	0/1:10,1:12:44.80:45,0,178	0/1:25,1:25:25.24:25,0,482	0/0:23,1:24:0.04:0,0,398	0/0:10,0:9:7.59:0,8,40	./.	0/1:13,0:12:0:0,0,0	0/0:5,0:5:12.04:0,12,180	1/1:1,4:5:3.01:34,3,0	0/1:21,0:21:24.91:25,0,461	0/0:10,0:9:24.08:0,24,355	0/1:11,0:11:5.48:5,0,247	0/0:17,0:17:13.68:0,14,102	0/1:9,1:10:40.38:40,0,238
chr10	107843155	.	CTT	C	2075.45	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=4.913;DP=631;FS=3.171;HRun=13;HaplotypeScore=85.2469;InbreedingCoeff=0.8634;MQ=67.06;MQ0=4;MQRankSum=1.086;QD=13.22;ReadPosRankSum=-0.348;VQSLOD=2.6830;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:42:87.99:0,88,1235	0/0:5,0:14:25.19:0,25,119	0/1:27,0:12:14.47:14,0,74	0/0:18,0:6:5.97:0,6,27	0/0:29,0:33:91.72:0,92,1168	0/0:10,0:13:34.96:0,35,433	0/0:18,0:20:44.62:0,45,592	1/1:12,23:37:73.96:640,74,0	0/0:10,0:10:21.03:0,21,248	0/0:25,0:25:66.20:0,66,910	0/0:17,0:18:42.12:0,42,566	0/0:6,0:25:26.56:0,27,210	0/0:19,1:21:23.53:0,24,604	0/0:18,0:19:53.13:0,53,673	0/0:23,0:23:51.16:0,51,700	0/0:23,0:24:71.29:0,71,937	0/0:26,2:29:43.12:0,43,927	0/0:18,0:20:47.10:0,47,587	1/1:5,17:21:47.66:421,48,0	1/1:5,23:28:33.32:526,33,0	1/1:4,10:14:14.95:145,15,0	0/0:13,0:13:24:0,24,285	0/0:15,0:17:41.06:0,41,515	0/0:14,0:15:41.63:0,42,573	0/0:30,0:34:79.70:0,80,1020	0/0:23,0:23:54.10:0,54,683	1/1:3,24:28:53.35:506,53,0	0/0:16,0:16:42.13:0,42,590
chr10	107845209	.	CCACT	C	1323.52	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.069;DP=799;FS=0.000;HRun=0;HaplotypeScore=138.3595;InbreedingCoeff=0.9996;MQ=82.32;MQ0=0;MQRankSum=-2.128;QD=36.76;ReadPosRankSum=2.331;VQSLOD=3.8833;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,3435	0/0:11,0:11:33.11:0,33,865	0/0:24,0:24:66.23:0,66,1695	0/0:23,0:23:48.56:0,49,1511	0/0:20,0:20:57.20:0,57,1484	0/0:31,0:31:84.29:0,84,2185	0/0:25,0:25:75.26:0,75,1897	0/0:27,0:27:78.26:0,78,1955	0/0:27,0:27:75.24:0,75,1909	0/0:34,0:34:96.33:0,96,2456	0/0:18,0:18:54.19:0,54,1404	1/1:4,32:36:78.26:1418,78,0	0/0:39,0:39:99:0,114,2966	0/0:32,0:32:90.29:0,90,2249	0/0:28,0:28:81.28:0,81,2114	0/0:50,0:50:99:0,148,3770	0/0:43,0:43:99:0,126,3233	0/0:22,0:22:63.22:0,63,1628	0/0:19,0:19:48.16:0,48,1204	0/0:19,0:19:48.15:0,48,1128	0/0:54,0:54:99:0,154,3890	0/0:24,0:24:63.22:0,63,1638	0/0:20,0:20:51.18:0,51,1327	0/0:37,0:37:96.33:0,96,2407	0/0:31,0:31:90.31:0,90,2291	0/0:25,0:25:69.24:0,69,1796	0/0:16,0:16:39.13:0,39,1011	0/0:19,0:19:51.15:0,51,1276
chr10	107846063	.	A	AAC	2237.98	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-4.979;DP=598;FS=2.372;HRun=0;HaplotypeScore=85.4925;InbreedingCoeff=0.8663;MQ=63.86;MQ0=7;MQRankSum=-1.806;QD=23.81;ReadPosRankSum=-0.536;VQSLOD=4.2237;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:38:61.29:0,61,819	0/0:1,0:12:28.41:0,28,140	0/0:38,0:15:27.08:0,27,310	0/0:23,0:19:27.07:0,27,303	0/0:23,0:23:42.08:0,42,480	0/0:16,0:16:27.02:0,27,289	0/0:26,0:28:50.75:0,51,511	1/1:20,4:24:0.93:429,1,0	0/0:16,0:16:30.07:0,30,340	0/0:16,0:17:47.96:0,48,519	0/0:15,0:16:26.90:0,27,285	0/0:14,0:14:27.08:0,27,315	0/0:14,0:14:42.10:0,42,471	0/0:19,0:19:33.10:0,33,386	0/0:15,0:17:47.39:0,47,460	0/0:14,0:14:30.06:0,30,338	0/0:33,0:34:61.32:0,61,840	0/0:23,0:24:49.98:0,50,694	1/1:15,4:18:21.03:304,21,0	1/1:5,9:14:36.12:560,36,0	1/1:10,10:19:10.83:520,11,0	0/0:21,0:25:35.58:0,36,348	0/0:19,1:20:0.90:0,1,423	0/0:18,0:18:39.12:0,39,457	0/0:19,0:19:42.12:0,42,492	0/0:25,0:25:45.09:0,45,491	1/1:6,11:17:9.99:582,10,0	0/0:33,0:34:69.04:0,69,788
chr10	107846111	.	T	TA	1808.61	PASS	AB=0.808;AC=10;AF=0.179;AN=56;BaseQRankSum=7.880;DP=535;FS=11.745;HRun=10;HaplotypeScore=71.3724;InbreedingCoeff=0.7442;MQ=75.95;MQ0=0;MQRankSum=-2.545;QD=16.01;ReadPosRankSum=-3.132;VQSLOD=2.1244;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:71.83:0,72,591	0/0:14,0:14:35.91:0,36,290	0/0:19,0:19:34.60:0,35,241	0/0:16,0:16:1.04:0,1,91	0/0:19,0:19:53.92:0,54,440	0/0:19,0:19:50.93:0,51,418	0/0:16,0:16:41.94:0,42,344	1/1:8,25:33:22.74:629,23,0	0/0:11,0:12:25.99:0,26,203	0/0:19,0:20:43.97:0,44,351	0/0:17,0:17:35.94:0,36,296	0/0:13,0:14:34.98:0,35,274	0/0:13,0:14:31.98:0,32,249	0/0:13,1:16:8.97:0,9,266	0/0:18,0:19:49.93:0,50,394	0/0:15,0:15:41.95:0,42,345	0/0:32,0:34:81.98:0,82,652	0/0:29,0:29:77.86:0,78,634	0/1:9,15:24:4.19:362,0,4	1/1:4,10:14:27.06:281,27,0	1/1:6,8:14:21.05:224,21,0	0/0:20,0:20:41.91:0,42,341	0/0:22,0:22:53.92:0,54,443	0/0:13,0:13:23.49:0,23,259	0/0:16,0:17:40.96:0,41,324	0/0:18,0:18:38.90:0,39,314	1/1:5,15:21:26.32:468,26,0	0/1:6,0:7:10.40:10,0,109
chr10	107847964	.	A	AG	2044.20	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-6.529;DP=633;FS=6.975;HRun=0;HaplotypeScore=73.8417;InbreedingCoeff=0.9728;MQ=65.56;MQ0=4;MQRankSum=5.168;QD=16.10;ReadPosRankSum=4.189;VQSLOD=5.3890;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,123,1190	0/0:15,0:14:32.80:0,33,212	0/0:42,0:15:19.19:0,19,186	0/0:19,0:7:10.60:0,11,92	0/0:26,0:26:64.45:0,64,565	0/0:12,0:12:34.24:0,34,304	0/0:18,0:18:49.84:0,50,507	1/1:5,31:37:61.38:705,61,0	0/0:14,0:14:40.99:0,41,363	0/0:27,0:27:80.05:0,80,780	0/0:13,0:13:31.33:0,31,276	0/0:19,0:19:24.41:0,24,170	0/0:12,0:12:35.98:0,36,322	0/0:17,0:17:45.06:0,45,453	0/0:31,0:31:84.53:0,85,769	0/0:18,0:18:50.12:0,50,477	0/0:28,0:26:63.05:0,63,623	0/0:23,0:23:65.96:0,66,620	1/1:5,15:21:20.32:390,20,0	1/1:4,22:26:66.79:583,67,0	1/1:3,22:26:24.75:363,25,0	0/0:17,0:16:42.01:0,42,406	0/0:23,0:22:45.09:0,45,415	0/0:19,0:18:48:0,48,500	0/0:24,0:24:66.85:0,67,641	0/0:30,0:30:85.28:0,85,813	1/1:1,16:17:8.96:174,9,0	0/0:14,0:14:38.17:0,38,344
chr10	107848553	.	TA	T	2537.59	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.877;DP=478;FS=5.323;HRun=8;HaplotypeScore=53.9371;InbreedingCoeff=0.9458;MQ=81.69;MQ0=7;MQRankSum=1.513;QD=21.88;ReadPosRankSum=-2.542;VQSLOD=3.0616;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1206	0/0:8,0:8:24.07:0,24,289	0/0:48,0:23:6.76:0,7,179	0/0:27,0:12:7.71:0,8,66	0/0:20,0:20:51.02:0,51,594	0/0:11,0:11:33.07:0,33,368	0/0:10,0:10:30.09:0,30,362	1/1:7,35:42:99:967,105,0	0/0:4,0:4:12.01:0,12,121	0/0:12,0:12:30.07:0,30,340	0/0:18,0:18:51.09:0,51,589	0/0:5,0:5:15.04:0,15,178	0/0:14,0:15:39.10:0,39,457	0/0:11,0:11:27.08:0,27,326	0/0:12,0:12:36.10:0,36,423	0/0:6,0:6:18.02:0,18,202	0/0:24,0:24:69.15:0,69,805	0/0:14,0:14:42.13:0,42,507	1/1:3,19:22:57.04:529,57,0	1/1:0,19:19:54.08:521,54,0	1/1:2,9:11:21.03:203,21,0	0/0:7,0:7:18.03:0,18,196	0/0:11,0:11:27.08:0,27,316	0/0:11,0:11:27.07:0,27,314	0/0:17,0:17:48.13:0,48,558	0/0:21,0:21:51.16:0,51,615	1/1:1,21:22:50.91:492,51,0	0/0:14,0:14:42.09:0,42,472
chr10	107849955	.	AT	A	1976.48	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.948;DP=594;FS=24.135;HRun=12;HaplotypeScore=61.1184;InbreedingCoeff=0.9504;MQ=65.34;MQ0=5;MQRankSum=0.077;QD=14.64;ReadPosRankSum=-0.521;VQSLOD=2.0642;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:57.06:0,57,567	0/0:8,1:9:3.82:0,4,220	0/0:13,0:11:15.02:0,15,146	0/0:9,0:9:20.82:0,21,182	0/0:31,0:31:70.61:0,71,674	0/0:23,0:23:57.08:0,57,564	0/0:15,0:14:39.04:0,39,385	1/1:10,22:32:66.67:484,67,0	0/0:19,1:19:21.81:0,22,384	0/0:31,1:32:78.10:0,78,764	0/0:23,2:25:13.34:0,13,448	0/0:2,0:17:34.09:0,34,171	0/0:15,0:15:39.96:0,40,398	0/0:12,0:12:36.07:0,36,365	0/0:17,0:17:42.07:0,42,420	0/0:19,0:19:48.07:0,48,475	0/0:34,2:35:28.66:0,29,646	0/0:21,1:22:33.86:0,34,517	1/1:9,13:22:38.81:302,39,0	1/1:7,22:30:64.36:481,64,0	1/1:1,12:13:32.87:255,33,0	0/0:20,0:21:53.92:0,54,519	0/0:20,0:20:51.10:0,51,518	0/0:7,0:7:21.04:0,21,213	0/0:23,1:24:16.96:0,17,528	0/0:27,0:26:72.08:0,72,708	1/1:6,30:36:62.62:630,63,0	0/0:20,1:19:21.84:0,22,396
chr10	107850406	.	CCTAA	C	6092.72	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.752;DP=812;FS=4.554;HRun=0;HaplotypeScore=141.1426;InbreedingCoeff=0.9992;MQ=75.54;MQ0=1;MQRankSum=-8.126;QD=42.31;ReadPosRankSum=-0.991;VQSLOD=4.9731;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:68,0:68:99:0,196,5152	0/0:10,0:10:30.10:0,30,713	0/0:18,0:18:45.15:0,45,1068	0/0:14,0:14:42.13:0,42,1026	0/0:29,0:29:78.25:0,78,1988	0/0:11,0:11:33.11:0,33,880	0/0:26,0:26:78.27:0,78,2047	1/1:1,22:23:66.23:1224,66,0	0/0:30,0:30:87.30:0,87,2266	0/0:27,0:27:78.27:0,78,2005	0/0:24,0:24:63.22:0,63,1602	0/0:39,0:39:99:0,114,2957	0/0:54,0:54:99:0,151,3992	0/0:31,0:31:87.30:0,87,2307	0/0:30,0:30:90.31:0,90,2394	0/0:41,0:41:99:0,117,3059	0/0:50,0:48:99:0,148,3919	0/0:31,0:31:90.31:0,90,2361	1/1:1,19:20:57.20:1063,57,0	1/1:3,18:20:30.10:559,30,0	1/1:6,50:56:99:2014,107,0	0/0:18,0:18:54.19:0,54,1425	0/0:20,0:20:57.20:0,57,1486	0/0:42,0:42:99:0,120,3201	0/0:23,0:23:69.24:0,69,1807	0/0:24,0:24:69.24:0,69,1816	1/1:0,24:24:66.23:1231,66,0	0/0:8,0:8:24.08:0,24,640
chr10	107856267	.	G	GC	4113.08	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-12.710;DP=678;FS=6.611;HRun=7;HaplotypeScore=63.4582;InbreedingCoeff=0.8901;MQ=84.57;MQ0=0;MQRankSum=0.064;QD=24.63;ReadPosRankSum=-1.272;VQSLOD=3.4823;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:84.11:0,84,811	0/0:15,0:15:39.05:0,39,376	0/1:17,0:17:13.92:14,0,254	0/0:23,0:23:54.03:0,54,505	0/0:17,0:17:47.95:0,48,449	0/0:16,0:16:39.04:0,39,371	0/0:33,0:33:81.10:0,81,776	1/1:8,15:23:44.77:454,45,0	0/0:16,0:16:42:0,42,387	0/0:29,0:29:78.12:0,78,750	0/0:16,0:16:42.07:0,42,405	0/0:21,0:21:63.05:0,63,598	0/0:28,0:28:69.09:0,69,661	0/0:42,0:42:99:0,114,1072	0/0:26,0:26:72.11:0,72,695	0/0:15,0:15:42.06:0,42,400	0/0:27,0:27:78.09:0,78,745	0/0:22,0:22:63.08:0,63,603	1/1:4,21:25:63.10:707,63,0	1/1:1,13:14:36.11:435,36,0	1/1:9,61:71:99:1972,165,0	0/0:23,0:23:63.10:0,63,608	0/0:20,0:20:48.04:0,48,453	0/0:34,0:34:96.14:0,96,921	0/0:19,0:19:54.04:0,54,513	0/0:23,0:23:66.10:0,66,633	1/1:2,15:17:45.13:532,45,0	0/0:7,0:7:21.03:0,21,203
chr10	107856780	.	G	GT	784.87	PASS	AB=0.989;AC=15;AF=0.268;AN=56;BaseQRankSum=9.926;DP=701;FS=6.256;HRun=10;HaplotypeScore=111.4956;InbreedingCoeff=0.5759;MQ=61.39;MQ0=3;MQRankSum=-7.399;QD=3.72;ReadPosRankSum=-2.996;VQSLOD=0.3304;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:57.04:0,57,582	1/1:2,9:12:11.86:109,12,0	0/1:28,0:12:23.50:23,0,33	0/1:24,0:11:19.41:19,0,38	0/0:37,0:37:71.62:0,72,567	0/0:20,0:20:32.91:0,33,266	0/0:23,0:23:11.95:0,12,270	0/1:31,0:30:4.67:70,0,5	0/0:23,0:23:44.87:0,45,366	0/0:28,0:29:52.39:0,52,417	0/0:25,0:25:11.33:0,11,287	1/1:21,2:23:41.67:409,42,0	0/0:24,0:25:37.27:0,37,282	0/0:21,0:21:1.19:0,1,143	0/0:24,0:24:37.71:0,38,402	0/0:27,1:28:25.58:0,26,392	0/0:31,0:31:44.66:0,45,535	0/0:45,0:43:70.42:0,70,556	1/1:23,0:23:3.40:59,3,0	1/1:31,0:36:3.14:104,3,0	1/1:12,0:12:2.80:13,3,0	0/0:21,0:21:29.83:0,30,307	0/0:20,0:21:34.93:0,35,273	0/0:19,0:19:30.41:0,30,245	0/0:25,0:25:53.75:0,54,430	0/0:27,0:27:27.95:0,28,332	1/1:21,0:21:30.99:148,31,0	0/0:4,0:4:2.99:0,3,25
chr10	107856782	.	T	TTTTTTTG	6068.40	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-3.684;DP=720;FS=9.714;HRun=0;HaplotypeScore=192.1126;InbreedingCoeff=0.9266;MQ=61.09;MQ0=3;MQRankSum=-8.049;QD=43.04;ReadPosRankSum=-1.263;VQSLOD=3.7159;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:95.74:0,96,1818	0/0:12,0:12:11.79:0,12,83	0/0:30,0:13:21.34:0,21,247	0/0:24,0:11:10.14:0,10,159	0/0:37,0:37:87.50:0,87,1629	0/0:20,0:20:36.11:0,36,720	0/0:22,0:22:59.87:0,60,849	1/1:15,20:35:74.86:1661,75,0	0/0:24,0:24:51.12:0,51,956	0/0:28,0:28:66.59:0,67,1161	0/0:27,0:27:62.81:0,63,1018	0/0:24,0:24:55.84:0,56,512	0/0:24,0:24:53.44:0,53,877	0/0:20,0:20:47.68:0,48,671	0/0:23,0:23:61.35:0,61,1170	0/0:27,0:27:69.89:0,70,1112	0/0:30,0:30:78.25:0,78,1530	0/0:47,0:45:99:0,114,1722	1/1:19,10:28:62.53:1025,63,0	1/1:30,8:38:94.48:1935,94,0	1/1:6,7:15:8.38:227,8,0	0/0:21,0:21:50.75:0,51,941	0/0:22,0:22:44.93:0,45,771	0/0:20,0:20:30.10:0,30,644	0/0:23,0:23:57.15:0,57,1190	0/0:29,0:29:68.89:0,69,1103	1/1:3,20:23:33.51:1221,34,0	0/0:3,0:3:3.01:0,3,44
chr10	107857291	.	C	CA	811.24	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.521;DP=704;FS=13.816;HRun=7;HaplotypeScore=64.3331;InbreedingCoeff=0.9132;MQ=68.05;MQ0=5;MQRankSum=-3.123;QD=23.86;ReadPosRankSum=1.332;VQSLOD=2.9164;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:75.11:0,75,722	0/0:5,0:5:12.02:0,12,116	0/0:32,0:22:36.85:0,37,410	0/0:12,0:8:19.54:0,20,164	0/0:42,0:42:99:0,111,1060	0/0:24,0:24:69.11:0,69,665	0/0:15,0:15:42.07:0,42,406	0/0:27,0:27:66.09:0,66,637	0/0:20,0:20:60.10:0,60,579	0/0:32,0:32:93.15:0,93,898	0/0:16,0:16:45.07:0,45,435	1/1:4,30:34:75.23:906,75,0	0/0:21,0:21:54.08:0,54,521	0/0:23,0:23:69.11:0,69,666	0/0:46,0:46:99:0,129,1237	0/0:25,0:25:63.10:0,63,608	0/0:26,0:26:66.10:0,66,637	0/0:20,0:19:57.07:0,57,542	0/0:21,0:20:45.07:0,45,433	0/0:32,0:32:87.14:0,87,840	0/0:24,0:24:66.05:0,66,623	0/0:34,0:34:93.14:0,93,898	0/0:30,0:30:75.12:0,75,724	0/0:20,0:20:57.09:0,57,550	0/0:27,0:27:81.11:0,81,776	0/0:32,0:32:81.12:0,81,782	0/0:31,0:31:84.13:0,84,811	0/0:3,0:3:9.01:0,9,86
chr10	107859602	.	TTTTG	T	3687.83	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.696;DP=609;FS=11.852;HRun=0;HaplotypeScore=98.8247;InbreedingCoeff=0.9960;MQ=64.89;MQ0=0;MQRankSum=-0.251;QD=28.37;ReadPosRankSum=-0.171;VQSLOD=2.8776;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:63.22:0,63,1444	0/0:10,0:10:21.07:0,21,476	0/0:24,0:17:20.95:0,21,452	0/0:27,0:15:20.44:0,20,611	0/0:28,0:28:75.19:0,75,1705	0/0:16,0:16:45.15:0,45,1003	0/0:17,0:17:39.10:0,39,830	1/1:13,15:28:48.07:683,48,0	0/0:16,0:16:36.12:0,36,813	0/0:25,0:25:60.20:0,60,1356	0/0:26,0:26:60.21:0,60,1396	0/0:17,0:17:32.79:0,33,779	0/0:22,0:22:57.18:0,57,1309	0/0:12,0:12:30.10:0,30,679	0/0:20,0:20:48.16:0,48,1147	0/0:14,0:14:33.11:0,33,782	0/0:34,0:34:72.20:0,72,1692	0/0:21,0:21:52.05:0,52,1165	1/1:6,19:25:57.12:819,57,0	1/1:7,25:32:66.19:1047,66,0	1/1:5,14:19:27.09:446,27,0	0/0:13,0:13:24.08:0,24,585	0/0:25,0:25:54.18:0,54,1269	0/0:18,0:18:45.14:0,45,1053	0/0:22,0:22:51.15:0,51,1161	0/0:22,0:22:54.19:0,54,1317	1/1:7,19:26:42.10:693,42,0	0/0:22,0:22:39.13:0,39,896
chr10	107859655	.	G	GT	972.06	PASS	AB=0.960;AC=8;AF=0.143;AN=56;BaseQRankSum=-2.575;DP=679;FS=5.362;HRun=10;HaplotypeScore=81.4547;InbreedingCoeff=0.6532;MQ=71.74;MQ0=7;MQRankSum=-0.190;QD=7.25;ReadPosRankSum=0.643;VQSLOD=2.0514;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,28:36:44.40:662,44,0	1/1:2,1:5:5.88:47,6,0	0/0:47,0:24:13.81:0,14,75	0/1:51,0:24:26.25:26,0,75	0/0:31,1:33:32.75:0,33,609	0/0:22,0:22:50.25:0,50,394	0/0:19,0:19:47.85:0,48,379	0/0:36,1:37:33.38:0,33,478	0/0:17,0:18:49.93:0,50,394	0/0:18,2:20:16.24:0,16,338	0/0:20,0:20:38.92:0,39,319	1/1:2,15:18:35.92:366,36,0	0/0:13,0:13:29.92:0,30,246	0/0:14,1:15:9.96:0,10,286	0/0:34,0:35:86.81:0,87,703	0/0:20,0:20:56.89:0,57,462	0/0:29,0:29:65.10:0,65,577	0/0:22,1:23:20.96:0,21,364	0/1:21,2:23:19.25:19,0,264	0/0:20,0:20:55.17:0,55,445	0/0:13,0:13:26.87:0,27,212	0/0:15,0:15:41.92:0,42,338	0/0:24,2:26:30.67:0,31,446	0/0:24,0:24:59.85:0,60,483	0/0:23,0:23:53.89:0,54,436	0/0:33,0:33:77.85:0,78,636	0/0:32,0:32:53.78:0,54,431	0/0:7,0:7:20.97:0,21,171
chr10	107910513	.	TG	T	789.90	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=5.548;DP=558;FS=12.226;HRun=8;HaplotypeScore=58.8968;InbreedingCoeff=0.9181;MQ=58.67;MQ0=15;MQRankSum=-1.779;QD=9.29;ReadPosRankSum=0.832;VQSLOD=0.5625;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:81.24:0,81,968	1/1:2,2:3:3:29,3,0	0/0:22,0:12:21.52:0,22,229	0/0:16,0:8:9.49:0,9,101	0/0:19,0:19:45.04:0,45,526	0/0:19,0:19:51.16:0,51,615	0/0:29,0:29:75.19:0,75,870	./.	0/0:14,0:14:39.09:0,39,454	0/0:26,0:25:57.17:0,57,680	0/0:15,0:15:42.13:0,42,507	0/0:13,0:13:39.05:0,39,423	0/0:19,0:19:45.12:0,45,529	0/0:22,0:22:54.17:0,54,652	0/0:20,0:20:54.15:0,54,628	0/0:15,0:15:45.13:0,45,533	0/0:28,0:28:75.20:0,75,881	0/0:34,0:34:81.21:0,81,942	1/1:7,5:6:9:81,9,0	1/1:3,8:10:12.02:116,12,0	1/1:8,33:34:50.73:492,51,0	0/0:22,0:21:45.05:0,45,544	0/0:14,0:14:39.11:0,39,459	0/0:23,0:23:60.18:0,60,724	0/0:19,0:19:48.11:0,48,562	0/0:21,0:21:45.14:0,45,541	1/1:6,11:17:24.04:232,24,0	0/0:8,0:8:15.04:0,15,181
chr10	107911321	.	A	ATCCGTCTCGGG	9914.06	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-4.090;DP=664;FS=0.949;HRun=0;HaplotypeScore=209.4484;InbreedingCoeff=0.9556;MQ=81.55;MQ0=0;MQRankSum=-11.496;QD=84.02;ReadPosRankSum=-3.004;VQSLOD=4.1019;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,4260	0/0:11,0:11:33.11:0,33,1058	0/0:16,0:16:48.16:0,48,1458	0/0:23,0:23:66.16:0,66,1830	0/0:14,0:14:42.13:0,42,1295	0/0:31,0:31:90.31:0,90,3118	0/0:26,0:26:78.24:0,78,2369	1/1:20,2:28:69.19:2285,69,0	0/0:19,0:19:51.16:0,51,1664	0/0:28,0:28:84.28:0,84,2769	0/0:8,0:8:24.08:0,24,819	0/0:19,0:19:57.20:0,57,2035	0/0:21,0:21:60.17:0,60,1837	0/0:31,0:31:90.29:0,90,2850	0/0:23,0:23:66.19:0,66,2078	0/0:23,0:23:66.22:0,66,2274	0/0:42,0:42:99:0,117,4000	0/0:43,0:43:99:0,123,4194	1/1:11,3:16:48.15:1957,48,0	1/1:4,1:7:2.97:172,3,0	1/1:21,15:44:47.92:2570,48,0	0/0:27,0:27:81.28:0,81,2734	0/0:18,0:18:54.19:0,54,1822	0/0:40,0:40:99:0,117,4112	0/0:14,0:14:39.13:0,39,1295	0/0:21,0:21:54.18:0,54,1928	1/1:7,15:23:57.20:2930,57,0	0/0:6,0:6:18.06:0,18,583
chr10	107914275	.	T	TAA	2002.35	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=2.365;DP=642;FS=0.452;HRun=14;HaplotypeScore=101.1142;InbreedingCoeff=0.8597;MQ=70.98;MQ0=0;MQRankSum=0.312;QD=13.91;ReadPosRankSum=-4.591;VQSLOD=1.6198;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:43:70.16:0,70,586	1/1:2,4:6:6.02:72,6,0	0/1:16,0:17:3.83:4,0,14	0/0:14,0:12:9.56:0,10,73	0/0:30,0:32:27.26:0,27,352	0/0:12,0:13:8.76:0,9,117	0/0:21,0:22:36.73:0,37,351	1/1:14,23:40:58.51:875,59,0	0/0:28,0:28:38.43:0,38,326	0/0:31,0:32:61.09:0,61,511	0/0:19,0:22:29.48:0,29,279	0/0:21,0:25:41.44:0,41,373	0/0:17,0:18:32.47:0,32,248	0/0:20,0:22:35.81:0,36,343	0/0:24,0:28:47.14:0,47,416	0/0:23,0:24:52.81:0,53,479	0/0:30,0:34:64.73:0,65,537	0/0:21,0:21:43.85:0,44,375	1/1:9,7:19:31.77:331,32,0	1/1:8,9:23:38.40:384,38,0	1/1:4,7:14:17.41:194,17,0	0/0:20,1:23:4.83:0,5,279	0/0:20,0:20:18.03:0,18,302	0/0:23,0:25:35.27:0,35,281	0/0:17,0:20:38.11:0,38,298	0/0:23,0:24:40.93:0,41,337	1/1:4,16:22:27.34:325,27,0	0/0:7,0:8:20.70:0,21,162
chr10	107914448	.	T	TCA	649.40	PASS	AB=0.996;AC=17;AF=0.327;AN=52;BaseQRankSum=-0.198;DP=657;FS=10.861;HRun=0;HaplotypeScore=89.8232;InbreedingCoeff=0.0941;MQ=68.28;MQ0=9;MQRankSum=-0.449;QD=2.01;ReadPosRankSum=-2.549;VQSLOD=0.4609;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:42.89:43,0,95	1/1:5,0:8:6:54,6,0	./.	./.	0/0:12,0:12:9.02:0,9,97	0/0:16,0:16:11.68:0,12,94	0/1:35,0:36:31.54:32,0,232	0/1:21,0:19:20.78:40,0,21	0/0:20,0:20:5.71:0,6,51	0/0:25,0:25:2.14:0,2,43	0/0:16,0:16:14.87:0,15,144	1/1:13,9:22:12.02:175,12,0	0/1:29,0:29:16.25:16,0,222	0/0:22,0:22:17.89:0,18,176	0/0:26,0:27:29.55:0,30,253	0/1:19,0:21:20.99:21,0,148	0/0:23,0:23:18.66:0,19,331	0/1:20,0:23:15.02:15,0,183	1/1:14,6:20:4.34:125,4,0	1/1:16,0:16:9.01:108,9,0	0/1:48,2:50:74.27:117,0,74	0/0:22,0:22:17.99:0,18,168	0/0:23,0:22:10.87:0,11,76	0/0:44,0:49:62.59:0,63,601	0/1:19,0:19:7.92:8,0,115	0/0:21,0:21:11.17:0,11,128	0/1:21,0:21:11.50:57,0,12	0/0:8,0:9:8.85:0,9,72
chr10	107915213	.	CA	C	3942.11	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.970;DP=607;FS=5.779;HRun=6;HaplotypeScore=60.9507;InbreedingCoeff=0.9931;MQ=79.62;MQ0=0;MQRankSum=-2.352;QD=29.20;ReadPosRankSum=-1.486;VQSLOD=3.7544;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1332	0/0:11,0:11:30.10:0,30,392	0/0:22,0:22:60.19:0,60,769	0/0:11,0:11:12.46:0,12,255	0/0:32,0:32:90.76:0,91,1173	0/0:18,0:18:51.15:0,51,656	0/0:19,0:19:57.17:0,57,736	1/1:2,31:33:93.21:990,93,0	0/0:17,0:17:45.15:0,45,592	0/0:28,0:28:75.23:0,75,964	0/0:25,0:25:69.70:0,70,906	0/0:16,0:16:42.14:0,42,553	0/0:20,0:20:60.20:0,60,789	0/0:11,0:11:27.09:0,27,355	0/0:19,0:19:51.17:0,51,670	0/0:15,0:15:42.14:0,42,551	0/0:32,0:32:90.29:0,90,1182	0/0:23,0:23:66.21:0,66,867	1/1:4,21:25:66.14:695,66,0	1/1:1,31:32:93.23:1000,93,0	1/1:1,24:25:72.18:774,72,0	0/0:24,0:24:63.20:0,63,827	0/0:17,0:17:45.15:0,45,590	0/0:21,0:21:57.17:0,57,736	0/0:16,0:16:42.13:0,42,539	0/0:23,0:23:66.19:0,66,830	1/1:2,18:20:45.06:484,45,0	0/0:16,0:16:48.16:0,48,632
chr10	107915513	.	C	CT	1024.97	PASS	AB=0.890;AC=15;AF=0.268;AN=56;BaseQRankSum=-2.069;DP=417;FS=0.000;HRun=11;HaplotypeScore=62.8114;InbreedingCoeff=0.0364;MQ=65.66;MQ0=8;MQRankSum=-0.699;QD=5.34;ReadPosRankSum=-1.520;VQSLOD=1.0218;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:45.71:0,46,337	0/0:3,0:3:5.96:0,6,46	0/1:37,0:13:2.93:3,0,55	0/0:41,0:16:1.13:0,1,64	0/0:16,0:15:29.01:0,29,228	0/0:6,0:6:11.93:0,12,93	0/0:22,1:24:19.75:0,20,309	1/1:5,16:21:41.48:399,41,0	0/0:6,0:6:16.84:0,17,109	0/1:11,1:13:7.49:7,0,122	0/1:11,0:11:10.26:10,0,78	0/0:11,0:11:14.17:0,14,101	0/1:12,0:12:16.26:16,0,88	0/1:12,0:12:12.48:12,0,143	0/0:11,0:11:19.91:0,20,134	0/1:7,0:7:20.03:20,0,54	0/0:20,0:20:37.61:0,38,256	0/1:17,1:17:15.56:16,0,219	0/1:11,7:17:6.12:254,0,6	0/1:1,10:11:2.20:149,0,2	0/1:5,5:10:11.26:79,0,11	0/1:6,0:6:3.73:4,0,29	0/0:9,0:9:17.18:0,17,116	0/0:19,0:19:40.48:0,40,270	0/0:5,0:5:8.90:0,9,65	0/0:16,0:16:28.12:0,28,212	1/1:7,8:15:2.31:208,2,0	0/0:8,0:7:14.94:0,15,116
chr10	107917039	.	CTTTCTTTCTT	C	290.69	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.649;DP=627;FS=0.000;HRun=0;HaplotypeScore=201.2845;InbreedingCoeff=0.9403;MQ=59.71;MQ0=3;MQRankSum=-3.927;QD=48.45;ReadPosRankSum=0.726;VQSLOD=2.7203;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.23:0,78,3063	1/1:1,5:6:12.04:377,12,0	0/0:24,0:17:28.80:0,29,870	0/0:31,0:13:15.02:0,15,497	0/0:29,0:29:63.22:0,63,2550	0/0:18,0:18:39.13:0,39,1599	0/0:31,0:31:44.51:0,45,3700	0/0:38,0:37:84.29:0,84,1952	0/0:23,0:23:63.22:0,63,2869	0/0:25,0:25:66.23:0,66,2865	0/0:23,0:23:54.19:0,54,2100	0/0:19,0:19:57.20:0,57,2798	0/0:17,0:17:45.15:0,45,2161	0/0:18,0:18:45.15:0,45,2049	0/0:28,0:28:78.27:0,78,3452	0/0:24,0:24:72.25:0,72,3283	0/0:16,0:16:45.15:0,45,1971	0/0:26,0:26:71.60:0,72,2650	0/0:15,0:15:33.11:0,33,856	0/0:25,0:24:69.19:0,69,2381	0/0:10,0:10:18.06:0,18,404	0/0:12,0:12:24.08:0,24,966	0/0:20,0:20:60.21:0,60,2589	0/0:30,0:31:26.36:0,26,3343	0/0:24,0:24:60.21:0,60,2831	0/0:26,0:25:69.24:0,69,3106	0/0:28,0:28:72.25:0,72,2649	0/0:11,0:11:27.09:0,27,1127
chr10	107917290	.	T	TG	1213.51	PASS	AB=0.571;AC=9;AF=0.161;AN=56;BaseQRankSum=-6.996;DP=561;FS=34.422;HRun=0;HaplotypeScore=71.9619;InbreedingCoeff=0.8317;MQ=54.33;MQ0=25;MQRankSum=3.106;QD=11.90;ReadPosRankSum=1.327;VQSLOD=2.0619;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:43:97.96:0,98,722	0/0:13,0:12:32.75:0,33,212	0/0:13,0:6:11.65:0,12,74	0/0:13,0:4:7.91:0,8,33	0/0:31,0:30:76.42:0,76,532	0/0:18,0:18:41.83:0,42,341	0/0:28,0:28:68.70:0,69,477	1/1:4,18:23:13.65:342,14,0	0/0:13,0:12:28.04:0,28,201	0/0:29,0:29:82.21:0,82,680	0/0:23,0:21:40.73:0,41,273	0/0:25,0:22:53.40:0,53,436	0/0:12,0:11:23.38:0,23,170	0/0:12,0:12:32.74:0,33,246	0/0:18,0:18:41.71:0,42,326	0/0:10,0:10:26.77:0,27,197	0/0:29,0:29:43.68:0,44,316	0/0:20,0:19:44.51:0,45,321	1/1:5,14:20:0.95:239,1,0	1/1:4,18:23:26.43:344,26,0	1/1:1,7:8:17.66:174,18,0	0/0:16,0:16:29.50:0,30,263	0/0:22,0:20:52.92:0,53,371	0/0:14,0:13:25.31:0,25,188	0/0:11,0:9:23.62:0,24,172	0/0:25,0:21:56.03:0,56,446	0/1:6,17:23:1.06:265,0,1	0/0:15,0:12:29.79:0,30,253
chr10	107917628	.	T	TA	1915.98	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-5.457;DP=441;FS=12.300;HRun=2;HaplotypeScore=62.2914;InbreedingCoeff=0.8279;MQ=61.51;MQ0=9;MQRankSum=-0.120;QD=17.91;ReadPosRankSum=0.678;VQSLOD=2.3799;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:80.74:0,81,919	0/0:4,0:4:5.69:0,6,78	0/0:9,0:3:5.76:0,6,48	0/0:13,0:9:12.39:0,12,105	0/0:14,0:14:32.90:0,33,363	0/0:16,0:15:30.01:0,30,330	0/0:18,0:17:39.07:0,39,446	1/1:14,27:40:92.70:919,93,0	0/0:4,0:4:12.04:0,12,163	0/0:7,0:7:18.05:0,18,220	0/0:17,0:16:35.75:0,36,364	0/0:11,0:11:21.45:0,21,195	0/0:17,0:17:33.92:0,34,396	0/0:13,0:13:30.91:0,31,344	0/0:14,0:14:29.09:0,29,306	0/0:14,0:14:30.50:0,31,330	0/0:35,0:32:65.92:0,66,745	0/0:20,0:19:49:0,49,621	1/1:5,10:14:4.82:304,5,0	1/1:3,7:10:15.01:182,15,0	1/1:6,16:22:0.06:188,0,0	0/0:11,0:11:24.04:0,24,284	0/0:8,0:6:15.01:0,15,176	0/0:15,0:15:36.95:0,37,436	0/0:8,0:8:20.92:0,21,211	0/0:21,0:21:52.07:0,52,636	1/1:3,16:19:39.08:479,39,0	0/0:9,0:7:18.05:0,18,233
chr10	107917743	.	A	AT	1373.15	PASS	AB=0.614;AC=11;AF=0.196;AN=56;BaseQRankSum=-7.665;DP=298;FS=3.683;HRun=10;HaplotypeScore=29.5823;InbreedingCoeff=0.7465;MQ=60.71;MQ0=6;MQRankSum=-2.166;QD=18.81;ReadPosRankSum=-0.261;VQSLOD=3.4265;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:35.95:0,36,295	1/1:3,2:5:6.02:64,6,0	0/0:4,0:2:3:0,3,25	0/0:4,0:4:8.93:0,9,67	0/0:19,0:19:50.92:0,51,419	0/0:12,0:12:32.96:0,33,271	0/0:14,0:14:38.85:0,39,305	0/1:10,17:25:9.28:468,0,9	0/0:5,0:4:8.99:0,9,74	0/0:15,0:14:35.96:0,36,295	0/0:10,0:10:26.97:0,27,222	0/0:5,0:5:14.97:0,15,121	0/0:3,0:3:8.98:0,9,71	0/0:8,0:8:23.96:0,24,194	0/0:9,0:9:23.88:0,24,188	0/0:7,0:7:20.97:0,21,172	0/0:22,0:22:50.88:0,51,412	0/0:21,0:20:47.58:0,48,388	1/1:2,14:15:39.05:402,39,0	1/1:1,7:8:18.05:192,18,0	1/1:1,5:6:12.03:128,12,0	0/0:2,0:2:2.98:0,3,25	0/0:3,0:3:8.95:0,9,69	0/0:6,0:6:11.96:0,12,95	0/0:13,0:13:35.94:0,36,296	0/0:14,0:14:38.94:0,39,320	1/1:1,10:11:27.07:288,27,0	0/0:13,0:14:40.99:0,41,326
chr10	107918351	.	CT	C	1573.17	PASS	AB=0.819;AC=18;AF=0.321;AN=56;BaseQRankSum=6.112;DP=503;FS=0.904;HRun=12;HaplotypeScore=61.8453;InbreedingCoeff=0.3683;MQ=67.09;MQ0=2;MQRankSum=3.524;QD=7.15;ReadPosRankSum=1.964;VQSLOD=2.1693;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,2:35:12.61:0,13,483	1/1:3,6:9:17.92:139,18,0	0/1:10,0:9:13.73:14,0,35	0/1:10,1:8:14.80:15,0,18	0/0:10,0:10:21.04:0,21,213	0/0:21,2:23:10.47:0,10,435	0/1:22,5:29:30.60:31,0,388	0/1:8,19:26:7.07:318,0,7	0/0:19,0:20:50.89:0,51,476	0/0:16,0:16:27.05:0,27,274	0/0:10,0:10:18:0,18,172	1/1:5,9:17:23.99:157,24,0	0/1:14,3:17:36.72:37,0,187	0/0:13,0:14:26.85:0,27,236	0/0:13,0:13:25.29:0,25,247	0/0:16,0:16:42.05:0,42,401	0/0:26,0:26:71.77:0,72,678	0/0:25,1:30:68.32:0,68,580	1/1:10,19:28:26.27:385,26,0	0/1:3,10:13:6.58:139,0,7	1/1:6,18:24:50.76:395,51,0	0/1:7,1:10:2.45:2,0,122	0/0:10,0:10:21.03:0,21,206	0/0:30,0:33:72.20:0,72,661	0/1:11,2:14:10.63:11,0,229	0/0:14,1:15:0.77:0,1,179	1/1:4,6:10:14.92:116,15,0	0/0:10,0:10:27.03:0,27,261
chr10	107918492	.	GCC	G	2424.85	PASS	AB=0.875;AC=11;AF=0.196;AN=56;BaseQRankSum=3.562;DP=419;FS=7.293;HRun=11;HaplotypeScore=57.5422;InbreedingCoeff=0.8186;MQ=82.94;MQ0=0;MQRankSum=-0.818;QD=21.85;ReadPosRankSum=2.886;VQSLOD=2.7164;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:24:37.59:0,38,486	0/0:4,0:4:9.02:0,9,115	0/0:14,0:16:35.15:0,35,399	0/0:11,0:12:19.40:0,19,188	0/0:4,0:7:8.77:0,9,103	0/0:10,0:11:26.55:0,27,335	0/0:32,0:35:94.73:0,95,1279	1/1:4,20:24:51.07:535,51,0	0/0:16,0:16:36.11:0,36,519	0/0:11,0:12:23.10:0,23,310	0/0:7,0:8:8.96:0,9,91	0/0:5,0:7:14.53:0,15,168	0/0:12,0:12:27.06:0,27,371	0/0:11,0:12:29.57:0,30,392	0/0:1,0:9:19.96:0,20,68	0/0:14,1:16:9.67:0,10,486	0/0:24,0:26:53.67:0,54,789	0/0:14,0:15:38.61:0,39,539	1/1:4,19:24:56.83:578,57,0	1/1:4,8:12:15.02:160,15,0	1/1:2,26:28:78.19:830,78,0	0/0:11,0:12:27.93:0,28,325	0/1:6,1:7:19.92:20,0,103	0/0:25,0:25:57.16:0,57,813	0/0:11,0:11:18.02:0,18,215	0/0:10,0:10:18.06:0,18,277	1/1:1,15:16:45.10:479,45,0	0/0:7,0:7:9.03:0,9,138
chr10	107921528	.	CT	C	132.98	PASS	AB=0.956;AC=5;AF=0.089;AN=56;BaseQRankSum=3.798;DP=593;FS=4.424;HRun=15;HaplotypeScore=78.5089;InbreedingCoeff=0.2853;MQ=72.24;MQ0=1;MQRankSum=0.096;QD=2.11;ReadPosRankSum=1.496;VQSLOD=-0.4478;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:38:46.08:0,46,610	0/0:9,2:11:7.71:0,8,186	0/1:22,0:16:35.83:38,0,36	0/1:12,0:11:7.94:8,0,36	0/0:13,0:15:23.79:0,24,192	0/0:14,2:16:13.68:0,14,234	0/0:13,1:15:20.79:0,21,165	0/0:36,3:39:14.94:0,15,286	0/0:18,1:20:38.75:0,39,310	0/0:27,1:30:44.62:0,45,361	0/0:22,1:25:13.25:0,13,330	1/1:3,13:16:12.94:189,13,0	0/0:16,1:17:9.13:0,9,173	0/0:8,0:8:18:0,18,158	0/0:23,1:24:12.48:0,12,348	0/0:15,1:16:10.63:0,11,208	0/0:35,1:36:29.83:0,30,423	0/0:25,1:23:10.65:0,11,204	0/0:21,0:19:36.74:0,37,312	0/0:20,0:22:50.72:0,51,412	0/0:11,0:12:18.71:0,19,145	0/0:10,0:13:24.23:0,24,188	0/0:16,0:16:30.10:0,30,234	0/0:15,0:14:29.86:0,30,240	0/0:21,0:25:47.63:0,48,388	0/0:34,1:35:60.17:0,60,492	0/0:32,1:33:49.48:0,49,515	0/1:11,2:12:11.49:11,0,131
chr10	107922127	.	C	CCAGTCAGT	4443.54	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-3.365;DP=631;FS=6.624;HRun=0;HaplotypeScore=155.9848;InbreedingCoeff=0.9340;MQ=72.36;MQ0=4;MQRankSum=-8.122;QD=34.45;ReadPosRankSum=-2.792;VQSLOD=3.1605;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:55.05:0,55,1297	0/0:4,0:8:12.04:0,12,218	0/0:35,0:31:23.72:0,24,543	0/0:22,0:20:18.06:0,18,444	0/0:18,0:18:36.12:0,36,896	0/0:29,0:29:54.17:0,54,1267	0/0:23,0:23:42.14:0,42,1045	1/1:43,0:43:21.07:645,21,0	0/0:23,0:23:42.08:0,42,939	0/0:22,0:22:39.13:0,39,871	0/0:21,0:21:24.07:0,24,555	0/0:21,0:21:42.14:0,42,1030	0/0:19,0:19:45.15:0,45,1110	0/0:18,0:18:27.09:0,27,679	0/0:28,0:28:60.17:0,60,1324	0/0:23,0:23:36.12:0,36,893	0/0:30,0:30:54.16:0,54,1261	0/0:16,0:16:3.14:0,3,580	1/1:12,6:18:18.06:739,18,0	1/1:12,8:21:24.08:982,24,0	1/1:10,3:17:9.03:358,9,0	0/0:20,0:20:39.13:0,39,959	0/0:17,0:17:27.09:0,27,649	0/0:21,0:21:45.15:0,45,1132	0/0:12,0:12:30.10:0,30,730	0/0:23,0:22:33.10:0,33,780	1/1:12,15:29:42.14:1720,42,0	0/0:18,0:18:45.15:0,45,1132
chr10	107925846	.	CTGAGGCT	C	5062.96	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.090;DP=631;FS=1.009;HRun=0;HaplotypeScore=147.0473;InbreedingCoeff=0.9965;MQ=85.58;MQ0=0;MQRankSum=-11.970;QD=54.44;ReadPosRankSum=-2.765;VQSLOD=4.1346;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,4047	0/0:12,0:12:33.56:0,34,1223	0/0:21,0:21:50.82:0,51,1496	0/0:22,0:22:58.80:0,59,2108	0/0:20,0:20:54.17:0,54,1942	0/0:12,0:12:36.12:0,36,1319	0/0:38,0:38:99:0,105,4119	1/1:3,19:22:57.18:1399,57,0	0/0:13,0:13:39.13:0,39,1487	0/0:38,0:38:99:0,105,3873	0/0:13,0:13:33.11:0,33,1203	0/0:23,0:23:63.22:0,63,2469	0/0:23,0:23:63.22:0,63,2519	0/0:23,0:23:69.24:0,69,2616	0/0:29,0:29:78.27:0,78,3031	0/0:37,0:37:99:0,108,4071	0/0:28,0:28:81.22:0,81,2903	0/0:29,0:29:81.28:0,81,3167	1/1:6,9:15:24.08:622,24,0	1/1:2,20:22:45.15:1129,45,0	1/1:3,10:13:21.07:545,21,0	0/0:26,0:26:78.27:0,78,2958	0/0:24,0:24:63.22:0,63,2271	0/0:31,0:31:93.32:0,93,3666	0/0:15,0:15:39.13:0,39,1515	0/0:19,0:19:51.17:0,51,1958	1/1:3,18:20:54.19:1368,54,0	0/0:6,0:6:18.06:0,18,713
chr10	107925928	.	G	GA	2286.91	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-3.307;DP=578;FS=17.343;HRun=9;HaplotypeScore=60.4168;InbreedingCoeff=0.9862;MQ=73.15;MQ0=0;MQRankSum=-0.840;QD=21.99;ReadPosRankSum=-2.983;VQSLOD=1.8267;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:89.94:0,90,781	0/0:16,0:16:35.99:0,36,313	0/0:13,0:13:26.98:0,27,230	0/0:11,0:12:11.97:0,12,103	0/0:20,0:20:50.80:0,51,431	0/0:22,0:22:56.96:0,57,490	0/0:23,0:23:56.97:0,57,491	1/1:4,19:23:60.16:661,60,0	0/0:17,0:17:44.99:0,45,391	0/0:25,0:26:65.02:0,65,553	0/0:16,1:17:17.82:0,18,383	0/0:19,0:19:50.99:0,51,443	0/0:23,0:23:57:0,57,511	0/0:22,0:22:56.98:0,57,494	0/0:19,0:19:53.95:0,54,461	0/0:28,0:28:83.97:0,84,725	0/0:25,0:25:65.94:0,66,567	0/0:17,0:17:47.96:0,48,410	1/1:6,17:23:51.12:554,51,0	1/1:6,14:20:42.07:451,42,0	1/1:2,14:16:30.08:332,30,0	0/0:17,1:18:14.83:0,15,357	0/0:13,0:13:29.98:0,30,260	0/0:32,2:34:41.77:0,42,589	0/0:20,0:20:50.98:0,51,443	0/0:24,0:24:62.97:0,63,547	1/1:3,19:22:42.11:465,42,0	0/0:11,0:11:26.77:0,27,234
chr10	107926092	.	TAC	T	289.48	PASS	AB=0.942;AC=14;AF=0.269;AN=52;BaseQRankSum=6.220;DP=498;FS=6.172;HRun=0;HaplotypeScore=70.2978;InbreedingCoeff=-0.1725;MQ=60.86;MQ0=6;MQRankSum=0.923;QD=1.30;ReadPosRankSum=1.781;VQSLOD=0.7942;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:34.27:0,34,395	0/1:9,0:9:26.80:27,0,39	./.	./.	0/1:8,0:8:3.64:4,0,39	0/1:14,0:14:5.66:6,0,157	0/0:25,0:25:24:0,24,271	0/0:20,0:19:11.92:0,12,88	0/1:13,0:13:26.95:27,0,99	0/0:21,0:21:9.68:0,10,220	0/1:6,0:8:5.14:5,0,37	1/1:6,0:7:5.68:28,6,0	0/0:21,0:22:32.77:0,33,420	0/0:22,1:23:7.33:0,7,265	0/0:12,0:12:17.75:0,18,248	0/1:19,2:22:56.83:57,0,349	0/1:23,0:23:22.71:23,0,221	0/1:26,2:28:33.26:33,0,390	0/0:13,0:13:10.26:0,10,102	0/0:10,0:10:9.03:0,9,134	0/1:18,0:18:10.12:10,0,92	0/1:14,1:16:2.11:59,0,2	0/0:12,0:12:15.03:0,15,202	0/1:27,4:31:99:107,0,341	0/0:18,0:17:24.07:0,24,333	0/0:23,0:23:0.40:0,0,327	0/1:21,3:23:46.80:47,0,140	0/0:6,0:6:3.01:0,3,33
chr10	107927268	.	G	GA	849.22	PASS	AB=0.817;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.590;DP=481;FS=18.215;HRun=13;HaplotypeScore=61.6510;InbreedingCoeff=0.3846;MQ=51.86;MQ0=47;MQRankSum=-5.626;QD=5.09;ReadPosRankSum=-4.990;VQSLOD=-0.6461;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:22:31.38:0,31,223	1/1:2,0:7:2.80:14,3,0	0/0:35,0:10:5.56:0,6,76	0/0:35,0:7:1.68:0,2,22	0/1:14,1:15:12.75:13,0,69	0/0:21,1:22:15.51:0,16,206	0/0:15,0:13:26.35:0,26,183	0/1:14,15:24:39.38:227,0,39	0/0:12,0:10:16.32:0,16,101	0/0:9,0:7:5.73:0,6,33	0/0:20,0:20:28.31:0,28,203	1/1:5,6:9:5.93:45,6,0	0/0:10,0:10:8.86:0,9,61	0/0:7,0:5:5.92:0,6,41	0/0:11,0:9:14.87:0,15,103	0/1:10,1:9:10.90:11,0,71	0/1:24,2:22:17.59:18,0,175	0/0:33,0:32:62.06:0,62,426	1/1:11,13:22:49.57:403,50,0	1/1:9,5:13:11.91:90,12,0	0/1:3,4:6:8.57:72,0,9	0/0:11,0:9:17.72:0,18,119	0/0:10,0:12:22.31:0,22,149	0/0:14,0:9:15.37:0,15,89	0/0:12,0:12:14.67:0,15,101	0/0:9,0:9:11.26:0,11,81	1/1:18,2:17:17.42:126,17,0	0/0:18,1:16:3.84:0,4,159
chr10	107929081	.	TA	T	406	PASS	AB=0.826;AC=8;AF=0.143;AN=56;BaseQRankSum=3.820;DP=472;FS=4.663;HRun=14;HaplotypeScore=62.1341;InbreedingCoeff=0.3404;MQ=66.27;MQ0=6;MQRankSum=-0.677;QD=3.33;ReadPosRankSum=1.523;VQSLOD=-0.0224;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:27.13:0,27,207	0/0:11,0:11:9.73:0,10,58	0/0:20,0:11:8.65:0,9,59	0/0:15,0:9:9.38:0,9,64	0/0:22,2:24:27.86:0,28,383	0/0:16,1:17:12.28:0,12,245	0/0:14,1:14:8.64:0,9,189	0/1:22,14:35:30.69:216,0,31	0/0:11,0:11:14.94:0,15,125	0/0:16,0:20:24.53:0,25,197	0/0:10,0:10:17.07:0,17,139	0/1:10,0:10:3.30:3,0,7	0/0:6,0:6:11.95:0,12,101	0/0:16,1:16:15.21:0,15,258	0/0:10,0:19:16.68:0,17,123	0/0:15,0:15:23.95:0,24,204	0/0:18,1:19:15.23:0,15,249	0/0:23,0:23:27.08:0,27,348	1/1:15,6:21:27.26:167,27,0	0/1:16,0:17:36.79:45,0,37	0/1:5,6:10:9.82:85,0,10	0/0:6,0:7:6.87:0,7,104	0/0:13,0:13:14.96:0,15,126	0/0:14,1:15:9.44:0,9,191	0/0:23,0:23:45.58:0,46,368	0/0:15,0:15:19.06:0,19,191	1/1:26,0:26:7.03:25,7,0	0/0:15,0:15:2.90:0,3,43
chr10	107929088	.	A	AG	224.61	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=5.321;DP=450;FS=4.817;HRun=0;HaplotypeScore=60.9408;InbreedingCoeff=0.4390;MQ=63.81;MQ0=8;MQRankSum=1.460;QD=5.35;ReadPosRankSum=0.152;VQSLOD=2.5297;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:17:48.28:0,48,467	1/1:4,7:11:27.81:302,28,0	0/1:18,0:9:14.59:15,0,95	0/1:13,0:7:21.53:22,0,75	0/0:23,0:23:63.06:0,63,736	0/0:16,0:16:46.89:0,47,518	0/0:13,0:12:33.06:0,33,385	0/0:35,0:33:85.38:0,85,666	0/0:10,0:10:26.92:0,27,292	0/0:18,0:18:48.61:0,49,501	0/0:10,0:10:29.94:0,30,302	0/0:11,0:11:9.02:0,9,99	0/0:6,0:6:18.03:0,18,210	0/0:19,0:17:48.06:0,48,529	0/0:19,0:19:29.84:0,30,284	0/0:14,0:14:39.04:0,39,418	0/0:19,0:19:45:0,45,505	0/0:27,0:26:62.45:0,62,711	0/0:15,0:15:35.94:0,36,309	0/0:17,0:17:18.87:0,19,185	0/0:12,0:11:27.28:0,27,217	0/0:5,0:5:13.86:0,14,172	0/0:12,0:12:32.86:0,33,307	0/0:17,0:17:23.71:0,24,434	0/0:21,0:20:56.37:0,56,665	0/0:13,0:13:33.04:0,33,398	0/0:23,0:23:29.95:0,30,264	0/0:14,0:14:24:0,24,274
chr10	107929091	.	AAAAAGAAAG	A	1653.92	PASS	AB=0.827;AC=9;AF=0.161;AN=56;BaseQRankSum=2.746;DP=443;FS=0.000;HRun=0;HaplotypeScore=111.9879;InbreedingCoeff=0.3784;MQ=61.54;MQ0=8;MQRankSum=-1.002;QD=13.13;ReadPosRankSum=0.950;VQSLOD=1.9651;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:16:33.23:0,33,503	0/0:9,0:9:15.76:0,16,526	0/0:16,0:7:8.65:0,9,59	0/0:11,0:5:8.81:0,9,62	0/0:23,0:23:39.48:0,39,1398	0/0:16,0:16:22.40:0,22,1109	0/0:15,0:14:2.40:0,2,448	0/1:34,0:32:24.01:251,0,24	0/1:11,0:11:63.06:80,0,63	0/0:15,0:15:33.09:0,33,773	0/0:9,0:9:27.06:0,27,691	0/1:2,9:11:6.71:75,0,7	0/0:6,0:6:14.97:0,15,284	0/0:19,0:17:21.77:0,22,1043	0/0:19,0:19:26.99:0,27,569	0/0:14,0:14:30.01:0,30,697	0/0:18,0:18:15.41:0,15,528	0/0:27,0:26:32.62:0,33,1252	1/1:16,3:19:37.70:653,38,0	0/1:5,12:17:23.45:303,0,23	0/1:12,0:11:0.71:195,0,1	0/0:6,0:6:15.02:0,15,160	0/0:10,0:10:21.05:0,21,460	0/0:17,0:17:35.81:0,36,758	0/0:21,0:20:51.58:0,52,999	0/0:14,0:14:41.50:0,42,990	1/1:5,17:22:8.96:243,9,0	0/0:14,0:14:24.05:0,24,305
chr10	107929092	.	A	AAAAG	1059.91	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=-2.582;DP=448;FS=1.662;HRun=0;HaplotypeScore=88.6573;InbreedingCoeff=0.7218;MQ=61.57;MQ0=8;MQRankSum=-0.306;QD=10.60;ReadPosRankSum=2.388;VQSLOD=2.5512;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:8.96:0,9,70	1/1:9,0:9:9.94:36,10,0	./.	./.	0/0:23,0:23:30.50:0,30,321	0/0:15,0:15:23.24:0,23,255	0/0:15,0:14:12:0,12,119	0/0:34,0:32:1.82:0,2,5	0/0:11,0:11:5.93:0,6,40	1/1:14,1:15:17.91:200,18,0	1/1:5,2:9:15.04:236,15,0	0/0:11,0:11:3:0,3,28	0/0:6,0:6:6.01:0,6,70	0/0:18,0:16:18.92:0,19,215	1/1:17,1:19:14.98:176,15,0	0/0:13,0:13:15:0,15,132	1/1:12,7:20:6.02:135,6,0	1/1:27,1:27:35.96:443,36,0	0/0:19,0:19:18.95:0,19,165	0/0:17,0:17:9.41:0,9,66	0/0:13,0:12:9.40:0,9,67	0/0:6,0:6:2.83:0,3,24	0/0:9,0:9:11.97:0,12,99	0/0:19,0:19:0.83:0,1,100	0/0:21,0:20:13.45:0,13,127	0/0:16,0:16:23.45:0,23,208	0/0:21,0:21:9.01:0,9,84	0/0:3,0:14:17.98:0,18,159
chr10	107929138	.	A	AAG	337.64	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.644;DP=546;FS=13.845;HRun=0;HaplotypeScore=79.6592;InbreedingCoeff=0.9086;MQ=65.52;MQ0=12;MQRankSum=0.872;QD=24.12;ReadPosRankSum=0.384;VQSLOD=3.5139;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.17:0,54,686	1/1:4,10:13:30.09:432,30,0	0/0:17,0:12:16.91:0,17,162	0/0:28,0:12:18.43:0,18,197	0/0:26,0:26:69.22:0,69,876	0/0:19,0:19:53.83:0,54,647	0/0:19,0:18:46.36:0,46,547	0/0:24,0:24:63.11:0,63,723	0/0:13,0:13:33.11:0,33,419	0/0:17,0:17:28.94:0,29,413	0/0:16,0:16:8.50:0,8,371	0/0:14,0:14:33.09:0,33,402	0/0:7,0:7:21.07:0,21,266	0/0:17,0:16:42.13:0,42,533	0/0:20,0:20:19.99:0,20,318	0/0:17,0:17:45.14:0,45,572	0/0:22,0:22:22:0,22,406	0/0:34,0:33:23.61:0,24,696	0/0:21,0:20:48.07:0,48,593	0/0:23,0:23:54.16:0,54,666	0/0:17,0:16:42.13:0,42,531	0/0:11,0:11:27.08:0,27,331	0/0:18,0:18:48.15:0,48,611	0/0:25,0:25:66.15:0,66,807	0/0:15,0:14:36.12:0,36,458	0/0:34,0:34:96.03:0,96,1182	0/0:18,0:18:33.09:0,33,396	0/0:22,0:22:48.05:0,48,544
chr10	107929652	.	T	TC	11365.96	PASS	AB=0.750;AC=54;AF=0.964;AN=56;BaseQRankSum=-3.390;DP=417;FS=0.000;HRun=6;HaplotypeScore=40.4086;InbreedingCoeff=-0.0446;MQ=76.09;MQ0=1;MQRankSum=-3.379;QD=27.26;ReadPosRankSum=2.644;VQSLOD=4.6815;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:57.18:717,57,0	1/1:1,1:10:17.52:87,18,0	0/1:4,3:7:38.14:58,0,38	0/1:9,3:10:15.32:111,0,15	1/1:2,17:19:42.13:527,42,0	1/1:1,12:13:30.10:378,30,0	1/1:3,19:22:45.14:566,45,0	1/1:7,11:18:33.04:369,33,0	1/1:0,12:12:30.10:377,30,0	1/1:4,10:14:30.57:374,31,0	1/1:0,7:7:21.07:264,21,0	1/1:4,18:22:57.18:709,57,0	1/1:2,19:21:48.15:604,48,0	1/1:0,12:12:36.12:453,36,0	1/1:0,17:17:39.12:491,39,0	1/1:2,17:18:48.15:604,48,0	1/1:0,12:12:24.08:302,24,0	1/1:0,10:10:27.09:339,27,0	1/1:3,8:11:24.06:289,24,0	1/1:2,10:12:21.07:264,21,0	1/1:5,31:36:84.26:1046,84,0	1/1:0,9:10:15.05:188,15,0	1/1:1,14:15:39.12:491,39,0	1/1:3,9:12:24.08:302,24,0	1/1:1,8:9:21.07:264,21,0	1/1:1,13:14:39.12:485,39,0	1/1:3,21:24:54.17:670,54,0	1/1:0,2:2:3.01:38,3,0
chr10	107931185	.	C	CCT	32.99	PASS	AB=1.000;AC=15;AF=0.341;AN=44;BaseQRankSum=-2.147;DP=559;FS=0.000;HRun=0;HaplotypeScore=86.8653;InbreedingCoeff=0.2732;MQ=65.03;MQ0=20;MQRankSum=-1.366;QD=0.17;ReadPosRankSum=-0.846;VQSLOD=1.4516;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:3:0,3,32	./.	0/0:33,0:20:0.89:0,1,2	0/1:42,0:18:0:0,0,0	./.	0/0:23,0:23:5.49:0,5,36	0/0:21,0:20:8.84:0,9,87	1/1:21,0:20:1.25:3,1,0	0/0:17,0:17:2.76:0,3,32	1/1:15,0:12:0.89:2,1,0	./.	0/0:17,0:17:2.90:0,3,16	./.	1/1:14,4:19:3.01:44,3,0	1/1:21,1:22:3.01:44,3,0	0/0:19,0:19:2.96:0,3,20	0/0:22,0:24:8.42:0,8,57	0/0:9,0:9:3:0,3,32	0/0:16,0:16:0.47:0,0,1	0/0:13,0:12:5.58:0,6,43	0/0:35,0:35:3.45:0,3,25	./.	./.	0/0:29,0:27:2.96:0,3,21	0/1:11,0:11:0:0,0,0	0/1:28,0:27:16.69:34,0,17	1/1:15,0:15:0.47:1,0,0	1/1:19,0:18:0.47:1,0,0
chr10	107931826	.	G	GCA	3470.65	PASS	AB=0.631;AC=9;AF=0.161;AN=56;BaseQRankSum=-9.033;DP=854;FS=9.572;HRun=0;HaplotypeScore=106.5489;InbreedingCoeff=0.5361;MQ=58.88;MQ0=9;MQRankSum=1.875;QD=17.89;ReadPosRankSum=-2.121;VQSLOD=3.0122;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:36:83.73:0,84,915	1/1:2,0:10:4.56:17,5,0	0/0:57,0:17:6.05:0,6,153	0/0:32,0:18:20.06:0,20,198	0/0:19,0:21:49.29:0,49,564	0/0:25,0:27:65.84:0,66,722	0/0:29,0:30:54.42:0,54,714	0/1:20,11:32:99:391,0,113	0/0:35,0:36:75.89:0,76,840	0/0:31,0:34:71.64:0,72,750	0/0:24,0:27:56.79:0,57,588	0/0:28,0:30:74.87:0,75,829	0/0:26,0:26:50.81:0,51,551	0/0:30,0:32:77.89:0,78,866	0/0:42,0:42:77.17:0,77,1104	0/0:27,0:28:62.67:0,63,662	0/0:35,0:41:89.55:0,90,948	0/0:29,0:32:44.07:0,44,667	1/1:5,13:19:29.76:546,30,0	1/1:5,9:14:20.76:302,21,0	0/1:30,66:99:26.41:1912,0,26	0/0:24,0:24:24.77:0,25,495	0/0:19,0:21:41.48:0,41,412	0/0:33,0:37:18.80:0,19,630	0/0:12,0:14:35.72:0,36,356	0/0:24,0:24:60.16:0,60,689	0/1:3,14:19:22.32:303,0,22	0/0:8,0:8:24.07:0,24,281
chr10	107933494	.	ACACACACGCGCGCGCGCGCGCGCG	A	206.62	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=2.385;DP=570;FS=0.000;HRun=0;HaplotypeScore=228.6326;InbreedingCoeff=0.5090;MQ=45.46;MQ0=81;MQRankSum=-2.190;QD=6.08;ReadPosRankSum=0.808;VQSLOD=2.5810;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:30:48.16:0,48,3076	0/0:6,0:4:6.01:0,6,205	./.	./.	0/0:17,0:13:21.07:0,21,1278	0/0:26,0:20:42.60:0,43,2901	0/0:37,0:28:43.49:0,43,2681	0/0:19,0:17:33.56:0,34,375	0/0:7,0:4:6.02:0,6,320	0/0:13,0:10:26.96:0,27,1299	0/0:11,0:10:15.05:0,15,1008	1/1:9,25:32:6.02:286,6,0	0/0:4,0:3:3.48:0,3,274	0/0:13,0:11:24.06:0,24,1512	0/0:14,0:13:15.05:0,15,557	0/0:14,0:11:18.51:0,19,1197	0/0:44,0:38:95.61:0,96,5986	0/0:48,0:44:99:0,118,7265	0/0:20,0:18:42.13:0,42,1695	0/0:8,0:6:9.03:0,9,538	0/0:66,0:54:99:0,102,5504	0/0:19,0:17:30.10:0,30,2040	0/0:9,0:4:6.02:0,6,459	0/0:39,0:34:72.20:0,72,4655	0/0:16,0:8:12.01:0,12,719	0/0:22,0:19:48.05:0,48,2854	0/0:14,0:8:21.07:0,21,955	0/0:15,0:13:30.09:0,30,1440
chr10	107933496	.	ACACACG	A	1149.21	PASS	AB=1.000;AC=11;AF=0.212;AN=52;BaseQRankSum=1.819;DP=581;FS=7.031;HRun=0;HaplotypeScore=94.4146;InbreedingCoeff=0.3249;MQ=45.66;MQ0=82;MQRankSum=0.563;QD=6.11;ReadPosRankSum=0.820;VQSLOD=1.1268;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:32:12.35:0,12,557	0/0:5,0:3:5.05:0,5,53	./.	./.	0/0:19,0:15:0.04:0,0,165	0/0:27,0:21:18.68:0,19,454	0/0:38,0:29:45.31:0,45,393	0/0:18,0:16:7.43:0,7,32	0/0:8,0:4:5.93:0,6,40	0/1:14,0:11:10.97:11,0,241	0/0:12,0:11:17.98:0,18,196	1/1:34,0:32:5.67:28,6,0	0/0:4,0:3:3.01:0,3,70	0/0:13,0:11:23.75:0,24,223	0/1:14,0:13:21.20:21,0,151	0/0:13,0:10:12.50:0,12,234	0/0:44,0:38:91.13:0,91,1040	0/0:48,0:45:52.08:0,52,1283	1/1:9,11:18:16.40:303,16,0	0/1:10,0:8:0.46:89,0,0	1/1:66,0:54:87.39:785,87,0	0/0:19,0:17:5.33:0,5,307	0/0:11,0:6:8.90:0,9,101	0/0:38,0:33:50:0,50,761	0/1:16,0:8:8.69:9,0,128	0/0:23,0:20:7.96:0,8,328	0/1:14,0:8:53.05:53,0,86	0/0:15,0:13:23.08:0,23,327
chr10	107934743	.	A	AC	93.75	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.104;DP=447;FS=9.849;HRun=8;HaplotypeScore=53.0748;InbreedingCoeff=0.7899;MQ=87.63;MQ0=1;MQRankSum=-1.900;QD=11.72;ReadPosRankSum=0.131;VQSLOD=1.5406;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:62.99:0,63,565	1/1:2,0:2:2.99:24,3,0	0/0:29,0:27:45.41:0,45,394	0/0:31,0:24:37.08:0,37,376	0/0:8,0:8:15.01:0,15,137	0/0:15,0:15:38.98:0,39,349	0/0:21,0:21:48:0,48,433	0/0:26,0:26:59.97:0,60,537	0/0:15,0:15:39:0,39,351	0/0:9,0:9:11.99:0,12,110	0/0:5,0:5:15.01:0,15,137	1/1:0,6:6:15.04:173,15,0	0/0:14,0:14:33.01:0,33,302	0/0:12,0:12:36.01:0,36,326	0/0:23,0:23:60.01:0,60,544	0/0:18,0:18:48.02:0,48,438	0/0:24,0:24:69.04:0,69,631	0/0:24,0:24:65.99:0,66,596	0/0:14,0:14:32.97:0,33,286	0/0:8,0:8:15:0,15,137	0/0:21,0:21:45.01:0,45,412	0/0:11,0:11:30.02:0,30,274	0/0:6,0:6:4.70:0,5,124	0/0:23,0:23:66.04:0,66,603	0/0:12,0:12:24:0,24,219	0/0:13,0:13:39.01:0,39,353	0/0:22,0:22:59.99:0,60,533	0/0:7,0:7:18:0,18,165
chr10	107934844	.	T	TC	112.80	PASS	AB=0.625;AC=3;AF=0.054;AN=56;BaseQRankSum=3.431;DP=460;FS=15.759;HRun=9;HaplotypeScore=57.3926;InbreedingCoeff=0.4060;MQ=71.86;MQ0=0;MQRankSum=-0.002;QD=5.94;ReadPosRankSum=-1.440;VQSLOD=-0.0698;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:74.95:0,75,644	1/1:4,0:4:5.36:31,5,0	0/0:21,0:21:42.55:0,43,347	0/0:17,0:15:29.27:0,29,227	0/0:13,0:14:26.02:0,26,214	0/0:16,0:16:38.01:0,38,316	0/0:26,0:26:71.98:0,72,625	0/0:21,1:22:29.97:0,30,260	0/0:10,0:10:29.99:0,30,260	0/0:17,0:17:41.98:0,42,364	0/0:13,0:13:32.99:0,33,286	0/1:6,9:15:28.05:175,0,28	0/0:12,0:13:35.03:0,35,292	0/0:10,0:10:20.98:0,21,182	0/0:11,0:11:26.99:0,27,234	0/0:12,0:12:32.99:0,33,287	0/0:51,0:51:99:0,138,1188	0/0:19,0:19:50.98:0,51,442	0/0:15,0:15:26.97:0,27,234	0/0:9,0:9:18:0,18,156	0/0:26,0:26:56.95:0,57,491	0/0:11,0:11:14.98:0,15,130	0/0:12,0:14:37.07:0,37,298	0/0:26,0:27:65:0,65,550	0/0:2,0:2:3:0,3,26	0/0:16,0:16:44.99:0,45,390	0/0:13,0:13:35.99:0,36,312	0/0:2,0:1:3:0,3,26
chr10	107935663	.	GT	G	825.82	PASS	AB=0.786;AC=12;AF=0.214;AN=56;BaseQRankSum=6.631;DP=528;FS=3.476;HRun=14;HaplotypeScore=56.6362;InbreedingCoeff=0.1758;MQ=54.55;MQ0=14;MQRankSum=-0.098;QD=4.37;ReadPosRankSum=2.435;VQSLOD=1.0509;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,2:41:57.81:0,58,777	0/0:6,0:6:9.01:0,9,84	0/0:22,1:6:6.88:0,7,54	0/0:11,0:3:0:0,0,1	0/0:18,0:19:26.94:0,27,211	0/1:10,3:13:29.11:29,0,152	0/0:19,2:21:18.80:0,19,301	0/1:16,12:30:5.84:194,0,6	0/0:22,0:22:56.96:0,57,509	0/0:13,0:14:11.18:0,11,133	0/0:14,2:16:6.41:0,6,188	0/0:18,0:18:4.78:0,5,70	0/1:10,1:11:8.57:9,0,64	0/0:15,0:18:29.86:0,30,261	0/0:16,2:19:11.48:0,11,265	0/0:23,0:24:32.78:0,33,438	0/1:25,3:28:2.56:3,0,422	0/1:16,6:23:60.91:61,0,288	1/1:7,10:17:32.77:207,33,0	0/1:5,5:10:28.27:80,0,28	0/1:10,9:18:56.74:96,0,57	0/0:16,0:16:29.26:0,29,327	0/0:10,0:10:17.94:0,18,156	0/0:23,2:25:7.17:0,7,324	0/0:9,0:10:11.63:0,12,128	0/0:22,0:22:38.79:0,39,322	1/1:6,17:28:48.79:296,49,0	0/1:4,1:6:2.72:3,0,108
chr10	107937066	.	AC	A	157.25	PASS	AB=0.941;AC=5;AF=0.089;AN=56;BaseQRankSum=5.449;DP=417;FS=0.000;HRun=9;HaplotypeScore=66.7569;InbreedingCoeff=0.5924;MQ=63.86;MQ0=0;MQRankSum=-1.436;QD=5.24;ReadPosRankSum=-1.652;VQSLOD=0.3212;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:63.14:0,63,694	1/1:3,0:3:2.03:6,2,0	0/1:15,0:9:11.89:12,0,38	0/0:24,0:12:0.62:0,1,60	0/0:16,0:16:33.10:0,33,378	0/0:10,0:10:18.05:0,18,208	0/0:10,0:10:27.08:0,27,311	0/0:31,0:31:32.95:0,33,607	0/0:9,0:9:18.05:0,18,208	0/0:13,0:13:30.08:0,30,338	0/0:15,0:15:31.33:0,31,348	1/1:3,8:11:27:247,27,0	0/0:10,0:10:27.06:0,27,300	0/0:6,0:6:18.05:0,18,207	0/0:12,0:12:33.08:0,33,370	0/0:16,0:15:27.04:0,27,297	0/0:21,0:21:48.03:0,48,523	0/0:23,0:23:51.12:0,51,575	0/0:18,1:20:23.62:0,24,494	0/0:14,0:14:36.07:0,36,401	0/0:12,0:12:27.08:0,27,312	0/0:13,0:13:30.03:0,30,321	0/0:11,0:11:27.08:0,27,312	0/0:12,0:12:27.07:0,27,302	0/0:23,0:23:56.93:0,57,609	0/0:14,0:14:36.02:0,36,398	0/0:9,0:9:21.06:0,21,242	0/0:14,0:14:33.10:0,33,377
chr10	107937957	.	GC	G	571.47	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.572;DP=598;FS=11.704;HRun=8;HaplotypeScore=85.1777;InbreedingCoeff=0.9570;MQ=81.11;MQ0=0;MQRankSum=-0.391;QD=21.17;ReadPosRankSum=1.102;VQSLOD=3.0250;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:95.42:0,95,1225	0/0:2,0:6:14.25:0,14,76	0/0:16,0:16:38.77:0,39,383	0/0:24,0:25:15.10:0,15,475	0/0:21,0:21:57.17:0,57,688	0/0:15,0:15:42.13:0,42,507	0/0:27,0:27:72.22:0,72,869	0/0:30,0:30:72.22:0,72,868	0/0:28,0:28:78.20:0,78,925	0/0:14,0:14:36.11:0,36,435	0/0:12,0:12:30.08:0,30,351	1/1:2,25:27:69.11:666,69,0	0/0:12,0:12:36.04:0,36,411	0/0:15,0:15:39.10:0,39,457	0/0:26,0:26:69.21:0,69,833	0/0:16,0:16:45.08:0,45,516	0/0:32,0:32:84.23:0,84,1000	0/0:25,0:25:60.64:0,61,724	0/0:19,0:19:51.15:0,51,610	0/0:12,0:12:33.09:0,33,385	0/0:61,0:61:99:0,159,1892	0/0:15,0:15:39.12:0,39,471	0/0:13,0:13:27.06:0,27,302	0/0:40,0:40:99:0,117,1369	0/0:14,0:14:39.12:0,39,471	0/0:16,0:16:39.12:0,39,471	0/0:15,0:15:42.09:0,42,471	0/0:7,0:7:18.06:0,18,217
chr10	107938017	.	CAG	C	4528.45	PASS	AB=0.980;AC=33;AF=0.611;AN=54;BaseQRankSum=-5.500;DP=557;FS=0.872;HRun=0;HaplotypeScore=84.8197;InbreedingCoeff=0.0980;MQ=49.77;MQ0=31;MQRankSum=0.380;QD=10.48;ReadPosRankSum=0.140;VQSLOD=4.2034;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:24:19.60:344,20,0	0/1:4,0:4:9.65:10,0,10	./.	0/0:4,0:1:1.25:0,1,3	0/1:14,0:14:0.63:171,0,1	0/1:24,1:22:22.95:258,0,23	1/1:27,0:25:12.81:291,13,0	0/0:20,0:18:29.83:0,30,245	1/1:22,0:21:14.84:295,15,0	1/1:13,0:12:14.97:192,15,0	1/1:6,0:6:8.54:74,9,0	0/1:32,0:32:99:211,0,271	1/1:12,0:10:4.22:112,4,0	0/1:20,1:21:7.98:192,0,8	1/1:16,0:14:29.98:275,30,0	0/1:11,1:12:20.17:54,0,20	0/1:44,3:43:24.79:539,0,25	0/1:31,0:24:14.21:307,0,14	0/0:10,0:10:6.29:0,6,93	0/1:9,0:8:15.07:15,0,31	0/0:72,0:65:87.61:0,88,896	1/1:12,0:12:10.71:49,11,0	0/1:11,0:11:3.37:66,0,3	1/1:41,2:41:32.74:608,33,0	1/1:15,1:15:1.09:147,1,0	1/1:19,0:19:22.32:282,22,0	0/0:17,0:16:35.34:0,35,274	0/1:12,0:10:35.20:35,0,44
chr10	107938438	.	C	CCT	146.47	PASS	AB=0.889;AC=5;AF=0.192;AN=26;BaseQRankSum=-1.281;DP=96;FS=0.000;HRun=0;HaplotypeScore=17.6693;InbreedingCoeff=-0.0463;MQ=40.44;MQ0=3;MQRankSum=-1.743;QD=4.18;ReadPosRankSum=1.617;VQSLOD=1.2809;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,1:7:12.10:12,0,35	./.	0/0:3,0:1:3.01:0,3,37	./.	./.	./.	0/0:6,0:6:0:0,0,0	0/1:10,4:14:99:175,0,304	0/0:2,0:2:2.58:0,3,35	1/1:1,1:1:3.01:40,3,0	./.	./.	./.	./.	0/1:11,0:11:8.76:9,0,73	0/0:5,0:5:5.61:0,6,72	0/0:2,0:2:2.98:0,3,22	0/0:3,0:3:9.03:0,9,114	0/0:1,0:1:3.01:0,3,39	./.	0/0:4,0:4:9.02:0,9,115	./.	./.	./.	0/0:2,0:2:2.58:0,3,44	./.	./.	./.
chr10	107938710	.	G	GT	242.59	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=1.701;DP=130;FS=4.445;HRun=9;HaplotypeScore=19.4815;InbreedingCoeff=0.3839;MQ=82.00;MQ0=0;MQRankSum=-1.035;QD=13.48;ReadPosRankSum=1.027;VQSLOD=1.8302;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:17.99:0,18,156	1/1:1,4:6:17.88:180,18,0	0/0:5,0:4:5.95:0,6,45	0/1:4,0:4:4.15:4,0,21	0/0:5,0:5:11.11:0,11,99	0/0:6,0:6:14.99:0,15,130	0/0:3,0:3:8.04:0,8,58	0/0:12,1:13:2.81:0,3,253	0/0:3,0:3:8.98:0,9,74	0/0:3,0:3:9:0,9,78	0/0:6,0:6:17.87:0,18,145	1/1:1,5:6:15.04:166,15,0	0/1:2,0:2:17.51:18,0,20	0/0:4,0:4:12:0,12,104	0/0:4,0:4:11.84:0,12,92	0/0:3,0:3:5.99:0,6,52	0/0:4,0:4:11.94:0,12,96	0/0:3,0:3:9:0,9,78	0/0:8,0:8:14.91:0,15,120	0/0:4,0:4:12:0,12,104	0/0:2,0:2:6:0,6,52	0/0:1,0:1:3:0,3,26	0/0:6,0:6:18:0,18,156	0/0:3,0:3:8.87:0,9,68	0/0:6,0:6:17.99:0,18,153	0/0:4,0:4:6.89:0,7,75	0/0:6,0:6:15:0,15,130	0/0:3,0:3:9:0,9,78
chr10	107940231	.	TAGCACAGAGA	T	1265.78	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.942;DP=577;FS=5.924;HRun=0;HaplotypeScore=168.0375;InbreedingCoeff=0.9716;MQ=88.44;MQ0=0;MQRankSum=-5.907;QD=70.32;ReadPosRankSum=1.606;VQSLOD=2.9435;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,7038	0/0:7,0:7:21.05:0,21,761	0/0:22,0:22:66.20:0,66,2525	0/0:28,0:28:81.07:0,81,3634	0/0:11,0:11:33.11:0,33,1795	0/0:20,0:20:57.20:0,57,2914	0/0:25,0:25:75.26:0,75,3734	0/0:15,0:15:45.15:0,45,2068	0/0:19,0:19:54.19:0,54,2873	0/0:28,0:28:84.28:0,84,4398	0/0:6,0:6:18.06:0,18,989	1/1:0,18:18:39.13:1361,39,0	0/0:13,0:13:39.12:0,39,1659	0/0:19,0:19:51.16:0,51,2481	0/0:24,0:24:69.22:0,69,3433	0/0:18,0:18:54.17:0,54,2701	0/0:31,0:31:93.32:0,93,4504	0/0:32,0:32:96.27:0,96,4577	0/0:10,0:10:30.10:0,30,1512	0/0:12,0:12:36.12:0,36,1870	0/0:56,0:56:99:0,166,8097	0/0:11,0:11:33.10:0,33,1372	0/0:5,0:5:15.03:0,15,614	0/0:33,0:33:96.31:0,96,4380	0/0:15,0:15:42:0,42,1868	0/0:20,0:20:57.18:0,57,2802	0/0:17,0:17:51.17:0,51,2323	0/0:14,0:14:42.14:0,42,2283
chr10	107943513	.	TTG	T	483.96	PASS	AB=0.878;AC=20;AF=0.357;AN=56;BaseQRankSum=5.792;DP=791;FS=6.079;HRun=0;HaplotypeScore=146.5701;InbreedingCoeff=-0.2383;MQ=68.35;MQ0=4;MQRankSum=0.525;QD=1.12;ReadPosRankSum=0.499;VQSLOD=2.3600;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,4:41:90.57:91,0,423	0/1:3,0:6:14.28:19,0,14	0/0:36,0:27:6.02:0,6,77	0/0:33,0:21:4.24:0,4,27	0/1:27,3:30:22.62:23,0,615	0/1:20,3:23:34.48:34,0,356	0/1:15,2:18:54.64:55,0,248	1/1:38,0:41:2.84:14,3,0	0/1:40,1:41:4.50:4,0,773	0/1:38,4:42:97.83:98,0,521	0/1:13,1:15:18.69:19,0,168	0/0:21,1:30:14.29:0,14,484	0/1:21,4:25:98.97:99,0,313	0/0:31,3:34:3.98:0,4,852	0/0:27,3:30:8.35:0,8,560	0/0:31,1:33:6.24:0,6,661	0/0:23,0:23:35.95:0,36,501	0/0:25,0:25:5.62:0,6,489	1/1:10,0:11:5.64:27,6,0	1/1:2,0:12:2.69:13,3,0	0/0:62,0:66:4.25:0,4,27	0/0:30,1:31:5.34:0,5,494	0/1:15,1:16:15.73:16,0,201	0/1:28,1:30:19.27:19,0,543	0/1:22,5:27:25.67:26,0,440	0/1:32,3:35:41.16:41,0,713	0/1:9,0:15:6.47:41,0,6	0/0:13,0:14:27.08:0,27,388
chr10	107943553	.	A	ATG	293.03	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=0.879;DP=876;FS=6.723;HRun=0;HaplotypeScore=161.0607;InbreedingCoeff=0.6198;MQ=50.41;MQ0=43;MQRankSum=-2.228;QD=4.58;ReadPosRankSum=-0.177;VQSLOD=2.6602;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.03:0,66,788	1/1:3,9:12:24.55:386,25,0	0/0:53,0:4:3.01:0,3,38	0/1:51,0:12:1.24:1,0,179	0/0:34,0:34:78.24:0,78,970	0/0:20,0:19:41.57:0,42,501	0/0:27,0:27:54.17:0,54,681	0/0:28,0:21:45.14:0,45,566	0/0:39,0:39:99:0,105,1321	0/0:39,0:37:84.25:0,84,1031	0/0:21,0:21:39:0,39,478	0/0:29,0:28:56.33:0,56,660	0/0:28,0:28:72.23:0,72,898	0/0:41,0:41:99:0,105,1296	0/0:28,0:28:66.21:0,66,833	0/0:37,0:37:90.16:0,90,1100	0/0:24,0:25:21.71:0,22,596	0/0:21,0:23:30.41:0,30,402	0/0:14,0:9:6.02:0,6,76	0/0:23,0:23:39.12:0,39,492	0/0:90,0:86:99:0,126,1561	0/0:44,0:44:99:0,102,1247	0/0:18,0:17:45.14:0,45,567	0/0:32,0:32:75.05:0,75,907	0/0:26,0:26:54.17:0,54,674	0/0:35,0:34:81.04:0,81,988	0/0:16,0:15:33.08:0,33,412	0/0:14,0:14:33.06:0,33,373
chr10	107943727	.	T	TGTGA	12318.62	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-13.927;DP=1251;FS=21.259;HRun=0;HaplotypeScore=243.4233;InbreedingCoeff=0.9996;MQ=61.74;MQ0=6;MQRankSum=4.021;QD=38.86;ReadPosRankSum=-0.049;VQSLOD=3.5469;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:66:99:0,180,3036	1/1:3,16:19:26.67:647,27,0	0/0:49,0:34:74.72:0,75,1130	0/0:57,0:47:71.16:0,71,1482	0/0:31,0:31:83.95:0,84,1336	0/0:29,0:29:81.23:0,81,1342	0/0:45,0:45:99:0,111,1892	1/1:10,28:40:78.10:1323,78,0	0/0:68,0:68:99:0,172,2921	0/0:76,0:76:99:0,186,3122	0/0:21,0:21:57.16:0,57,964	1/1:4,46:50:98.52:2546,99,0	0/0:36,0:36:96.30:0,96,1659	0/0:53,0:53:99:0,138,2270	0/0:65,0:65:99:0,181,2986	0/0:69,0:69:99:0,196,3353	0/0:32,0:32:81.22:0,81,1364	0/0:37,0:37:79.50:0,79,1516	1/1:5,10:15:33.01:651,33,0	1/1:4,29:33:42.60:1038,43,0	1/1:47,78:129:99:5410,141,0	0/0:37,0:37:99:0,105,1847	0/0:28,0:28:78.27:0,78,1400	0/0:45,0:47:99:0,120,2041	0/0:25,0:25:69.24:0,69,1226	0/0:43,0:43:99:0,108,1864	1/1:1,20:19:27.98:702,28,0	0/0:19,0:19:52.73:0,53,898
chr10	107943808	.	ATC	A	2294.76	PASS	AB=0.718;AC=7;AF=0.125;AN=56;BaseQRankSum=11.374;DP=1254;FS=5.291;HRun=0;HaplotypeScore=268.7002;InbreedingCoeff=-0.1432;MQ=53.69;MQ0=8;MQRankSum=-7.996;QD=6.71;ReadPosRankSum=-1.186;VQSLOD=2.5951;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,154,2654	0/1:12,7:19:92.15:146,0,92	0/0:46,0:30:76.20:0,76,1169	0/0:45,0:34:66.39:0,66,1236	0/0:29,0:29:81.06:0,81,1392	0/0:38,1:39:99:0,108,1820	0/0:38,0:38:99:0,111,1929	0/1:32,24:55:99:988,0,794	0/0:67,0:67:99:0,177,3023	0/0:55,0:55:99:0,163,2778	0/0:18,0:18:51.06:0,51,904	0/1:48,32:80:99:158,0,348	0/0:50,0:50:99:0,147,2603	0/0:63,0:63:99:0,187,3251	0/0:72,0:72:99:0,205,3642	0/0:56,0:56:99:0,159,2629	0/0:38,1:39:79.56:0,80,1959	0/0:33,1:33:48.59:0,49,1370	0/1:15,9:21:99:238,0,620	0/1:16,18:34:89.75:194,0,90	0/1:55,33:84:99:261,0,485	0/0:47,0:47:99:0,129,2027	0/0:30,0:30:87.24:0,87,1472	0/0:46,2:48:99:0,126,2208	0/0:18,0:18:47.84:0,48,857	0/0:51,0:51:99:0,147,2561	0/1:29,12:41:99:441,0,668	0/0:7,0:7:18.06:0,18,330
chr10	107943824	.	ATC	A	1185.13	PASS	AB=0.806;AC=6;AF=0.107;AN=56;BaseQRankSum=11.438;DP=1335;FS=14.819;HRun=0;HaplotypeScore=281.1351;InbreedingCoeff=-0.1202;MQ=54.28;MQ0=9;MQRankSum=-8.188;QD=4.41;ReadPosRankSum=-3.329;VQSLOD=0.6808;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,163,2969	0/1:22,0:22:97.49:97,0,225	0/0:55,0:28:82.08:0,82,1401	0/0:54,0:40:99:0,101,1725	0/0:33,0:33:93.11:0,93,1701	0/0:33,0:33:99:0,99,1836	0/0:41,0:41:99:0,117,2016	0/1:44,12:55:99:466,0,1380	0/0:64,0:64:99:0,168,3311	0/0:56,0:56:99:0,169,2999	0/0:17,0:17:48.14:0,48,861	0/1:59,27:86:46.95:47,0,1090	0/0:57,0:57:99:0,168,3126	0/0:63,0:63:99:0,180,3224	0/0:82,0:82:99:0,247,4570	0/0:55,0:55:99:0,160,3004	0/0:45,0:45:99:0,130,2381	0/0:31,0:30:80.24:0,80,1575	0/1:20,9:26:99:272,0,770	0/1:21,15:36:88.45:88,0,348	0/0:86,4:87:24.88:0,25,901	0/0:49,0:49:99:0,138,2589	0/0:29,0:29:87.27:0,87,1613	0/0:58,0:58:99:0,151,2760	0/0:25,0:25:68.81:0,69,1332	0/0:58,0:58:99:0,172,3145	0/1:29,11:40:99:339,0,842	0/0:8,0:8:24.08:0,24,438
chr10	107944045	.	C	CTG	12933.63	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-17.496;DP=1120;FS=4.754;HRun=0;HaplotypeScore=141.7585;InbreedingCoeff=0.9816;MQ=61.58;MQ0=6;MQRankSum=-1.275;QD=37.71;ReadPosRankSum=0.462;VQSLOD=6.5638;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,132,1720	1/1:4,12:16:33.11:565,33,0	0/0:42,0:36:82.02:0,82,1078	0/0:46,0:36:71.74:0,72,958	0/0:37,0:37:87.27:0,87,1128	0/0:38,0:38:99:0,111,1458	0/0:25,0:25:63.20:0,63,828	1/1:5,33:39:99:1739,105,0	0/0:45,0:45:99:0,120,1558	0/0:49,0:49:99:0,123,1617	0/0:29,0:29:75.20:0,75,940	1/1:8,68:74:99:2931,172,0	0/0:29,0:29:72.23:0,72,946	0/0:44,0:44:99:0,114,1482	0/0:49,0:49:99:0,135,1758	0/0:31,0:31:84.26:0,84,1089	0/0:30,0:30:63.19:0,63,826	0/0:31,0:31:62.62:0,63,1019	1/1:7,16:24:6.28:743,6,0	1/1:5,29:34:72.25:1234,72,0	1/1:32,89:117:99:4762,289,0	0/0:33,0:33:87.28:0,87,1143	0/0:30,0:30:75.23:0,75,970	0/0:58,0:58:99:0,147,1895	0/0:26,0:26:72.23:0,72,945	0/0:39,0:39:99:0,111,1459	1/1:3,28:31:57.19:960,57,0	0/0:12,0:12:36.12:0,36,473
chr10	107944099	.	A	ATG	347.19	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.634;DP=1050;FS=1.272;HRun=0;HaplotypeScore=148.0151;InbreedingCoeff=0.9816;MQ=59.05;MQ0=12;MQRankSum=-2.889;QD=19.29;ReadPosRankSum=-0.992;VQSLOD=3.6496;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:60:99:0,144,1696	1/1:5,13:18:27.09:441,27,0	0/0:39,0:19:15.03:0,15,169	0/0:33,0:18:26.29:0,26,322	0/0:20,0:21:50.91:0,51,588	0/0:35,0:35:90.23:0,90,1074	0/0:30,0:30:69.20:0,69,841	0/0:43,0:43:90.27:0,90,1103	0/0:38,0:38:81.20:0,81,963	0/0:39,0:40:99:0,108,1294	0/0:28,0:28:81.24:0,81,991	0/0:63,0:60:99:0,138,1687	0/0:44,0:45:99:0,114,1349	0/0:44,0:44:99:0,120,1448	0/0:34,0:34:81.25:0,81,1003	0/0:35,0:35:93.12:0,93,1129	0/0:34,0:34:90.28:0,90,1115	0/0:28,0:28:66.16:0,66,798	0/0:23,0:22:42.13:0,42,519	0/0:39,0:39:75.24:0,75,929	0/0:85,0:82:99:0,178,2156	0/0:35,0:35:81.22:0,81,978	0/0:27,0:27:65.89:0,66,818	0/0:71,0:72:99:0,165,2022	0/0:28,0:28:69.20:0,69,843	0/0:30,0:31:75.06:0,75,896	0/0:24,0:26:62.86:0,63,734	0/0:11,0:12:29.61:0,30,300
chr10	107944483	.	AC	A	167.99	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.566;DP=597;FS=1.342;HRun=3;HaplotypeScore=79.6051;InbreedingCoeff=0.9916;MQ=75.19;MQ0=0;MQRankSum=0.975;QD=21.00;ReadPosRankSum=0.934;VQSLOD=3.2748;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1604	1/1:1,7:8:21.07:260,21,0	0/0:22,0:20:29.69:0,30,481	0/0:25,0:19:37.19:0,37,399	0/0:26,0:26:69.19:0,69,967	0/0:23,0:23:66.22:0,66,939	0/0:24,0:24:72.23:0,72,1015	0/0:26,0:25:69.18:0,69,894	0/0:8,0:8:24.07:0,24,329	0/0:19,0:19:57.19:0,57,819	0/0:23,0:23:63.21:0,63,904	0/0:22,0:22:57.19:0,57,813	0/0:9,0:9:27.09:0,27,387	0/0:13,0:13:39.13:0,39,549	0/0:28,0:28:78.23:0,78,1068	0/0:18,0:18:48.14:0,48,652	0/0:38,0:38:99:0,114,1602	0/0:14,0:14:39.11:0,39,535	0/0:21,0:21:57.09:0,57,742	0/0:29,0:29:81.24:0,81,1114	0/0:19,0:19:56.96:0,57,745	0/0:17,0:17:51.17:0,51,729	0/0:13,0:13:39.12:0,39,539	0/0:23,0:23:63.15:0,63,843	0/0:21,0:21:63.20:0,63,886	0/0:32,0:32:96.32:0,96,1375	0/0:23,0:23:51.08:0,51,668	0/0:12,0:12:30.10:0,30,428
chr10	107944539	.	T	TTG	4080.17	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=4.227;DP=593;FS=4.675;HRun=0;HaplotypeScore=83.4916;InbreedingCoeff=0.9522;MQ=55.16;MQ0=13;MQRankSum=-6.882;QD=31.39;ReadPosRankSum=0.511;VQSLOD=5.4869;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,105,1497	1/1:1,5:6:18.04:286,18,0	0/0:21,0:9:21.41:0,21,226	0/0:22,0:8:8.45:0,8,75	0/0:22,0:22:63.17:0,63,919	0/0:19,0:19:57.18:0,57,824	0/0:22,0:21:60.09:0,60,838	1/1:7,21:26:24.48:712,24,0	0/0:12,0:12:36.09:0,36,503	0/0:24,0:24:67.46:0,67,984	0/0:26,0:26:75.15:0,75,1001	1/1:0,16:16:39.13:678,39,0	0/0:15,0:15:45.12:0,45,642	0/0:13,0:13:39.12:0,39,567	0/0:23,0:23:69.13:0,69,954	0/0:23,0:22:63.21:0,63,931	0/0:41,0:40:99:0,111,1635	0/0:15,0:15:39.10:0,39,565	1/1:12,11:19:34:668,34,0	1/1:12,15:26:52.15:933,52,0	1/1:6,1:4:2.82:52,3,0	0/0:16,0:16:35.88:0,36,471	0/0:23,0:23:66.19:0,66,920	0/0:25,0:25:59.99:0,60,907	0/0:18,0:18:45.14:0,45,644	0/0:34,0:33:95.60:0,96,1291	1/1:6,16:23:44.58:750,45,0	0/0:10,0:10:30.10:0,30,429
chr10	107944543	.	TTG	T	234.58	PASS	AB=0.909;AC=5;AF=0.089;AN=56;BaseQRankSum=7.804;DP=575;FS=4.098;HRun=0;HaplotypeScore=90.3729;InbreedingCoeff=0.0450;MQ=53.02;MQ0=12;MQRankSum=-7.206;QD=2.42;ReadPosRankSum=-4.610;VQSLOD=0.1716;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,113,1269	0/0:6,0:6:10.53:0,11,33	0/0:20,0:8:9.37:0,9,161	0/0:18,0:6:2.29:0,2,42	0/0:23,0:22:66.08:0,66,872	0/0:19,0:19:57.07:0,57,756	0/0:23,0:22:61.73:0,62,706	0/1:23,1:22:76.25:119,0,76	0/0:11,0:11:32.45:0,32,412	0/0:23,0:23:68.12:0,68,786	0/0:24,0:24:62.94:0,63,788	0/0:16,0:16:26.97:0,27,267	0/0:15,0:15:37.31:0,37,510	0/0:12,0:12:36.07:0,36,471	0/0:22,0:22:59.16:0,59,749	0/0:23,0:22:21.24:0,21,767	0/0:42,0:41:99:0,109,1478	0/0:14,0:14:42.05:0,42,540	0/1:22,0:20:11.14:128,0,11	0/1:15,10:24:41.97:45,0,42	0/1:6,0:3:1.27:4,0,1	0/0:15,0:15:39.79:0,40,417	0/0:23,0:23:59.54:0,60,777	0/0:29,0:28:67.43:0,67,897	0/0:17,0:17:48.08:0,48,599	0/0:31,0:31:81.62:0,82,1067	0/1:17,3:20:48.26:51,0,48	0/0:9,0:9:27.02:0,27,345
chr10	107944545	.	G	GTT	1763.39	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.462;DP=577;FS=2.185;HRun=10;HaplotypeScore=86.2573;InbreedingCoeff=0.9398;MQ=53.04;MQ0=13;MQRankSum=-9.532;QD=16.79;ReadPosRankSum=-2.538;VQSLOD=2.0791;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:45:85.35:0,85,842	1/1:5,0:5:15.04:155,15,0	0/0:20,0:8:14.85:0,15,125	0/0:17,0:4:5.62:0,6,46	0/0:22,0:22:53.83:0,54,594	0/0:21,0:21:47.96:0,48,474	0/0:20,0:23:18.15:0,18,366	1/1:19,2:22:13.72:209,14,0	0/0:11,0:12:22.24:0,22,276	0/0:23,0:23:35.74:0,36,359	0/0:20,0:23:41.85:0,42,528	0/0:16,0:16:27.20:0,27,223	0/0:14,0:14:38.99:0,39,379	0/0:11,0:11:24.01:0,24,243	0/0:19,0:21:36.47:0,36,443	0/0:19,0:21:56.42:0,56,534	0/0:41,0:41:99:0,105,1017	0/0:15,0:14:39.08:0,39,395	1/1:19,2:20:39.49:459,39,0	1/1:17,8:24:45.59:590,46,0	1/1:6,0:4:5.75:49,6,0	0/0:14,0:14:25.92:0,26,271	0/0:21,0:24:29.75:0,30,461	0/0:28,0:27:65.42:0,65,634	0/0:17,0:17:42.07:0,42,419	0/0:30,0:31:57.56:0,58,657	1/1:13,9:22:30.96:482,31,0	0/0:9,0:9:21.03:0,21,213
chr10	107944553	.	T	TG	45.78	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=5.498;DP=592;FS=16.306;HRun=0;HaplotypeScore=79.7720;InbreedingCoeff=0.6579;MQ=52.66;MQ0=15;MQRankSum=-3.615;QD=3.05;ReadPosRankSum=-0.501;VQSLOD=1.4168;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,108,1340	1/1:1,5:6:17.92:136,18,0	0/0:20,0:8:17.38:0,17,183	0/0:16,0:4:5.23:0,5,49	0/0:26,0:25:63.02:0,63,876	0/0:21,0:21:63.16:0,63,800	0/0:23,0:22:26.21:0,26,587	0/0:27,0:25:39.13:0,39,283	0/0:14,0:14:41.98:0,42,491	0/0:18,0:17:48:0,48,598	0/0:25,0:25:40.66:0,41,772	0/0:18,0:18:42.56:0,43,532	0/0:16,0:16:45.08:0,45,562	0/0:11,0:11:33.08:0,33,413	0/0:22,0:22:60.09:0,60,766	0/0:22,0:21:60.08:0,60,775	0/0:43,0:42:99:0,114,1485	0/0:17,0:15:45.11:0,45,589	0/0:24,0:21:47.74:0,48,286	0/0:27,0:25:45.53:0,46,239	0/1:9,0:6:3.11:3,0,28	0/0:14,0:14:32.09:0,32,483	0/0:24,0:24:45.40:0,45,746	0/0:30,0:29:71.94:0,72,964	0/0:17,0:17:48.10:0,48,627	0/0:30,0:30:79.94:0,80,1030	0/0:23,0:23:26.62:0,27,252	0/0:8,0:8:24.07:0,24,316
chr10	107944844	.	TAGAA	T	2255.68	PASS	AB=0.896;AC=26;AF=0.500;AN=52;BaseQRankSum=2.047;DP=451;FS=3.127;HRun=0;HaplotypeScore=77.2542;InbreedingCoeff=0.2426;MQ=68.39;MQ0=3;MQRankSum=1.970;QD=8.00;ReadPosRankSum=-1.694;VQSLOD=1.8789;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,4:15:6.02:92,6,0	1/1:3,0:3:3:25,3,0	./.	./.	0/1:12,0:19:52.35:52,0,55	1/1:12,8:20:36.12:548,36,0	0/1:9,2:11:23.72:37,0,24	0/0:27,0:26:0:0,0,0	0/0:7,0:16:15.05:0,15,261	0/0:14,0:14:15.05:0,15,333	0/0:12,0:12:0.16:0,0,464	0/1:21,0:21:1.14:1,0,39	1/1:13,2:15:18.05:256,18,0	1/1:4,7:11:12.04:183,12,0	1/1:15,6:21:9.03:137,9,0	1/1:6,9:15:15.05:229,15,0	0/1:12,14:26:6.97:211,0,7	0/1:16,0:17:18.96:19,0,33	0/0:19,0:19:13.90:0,14,93	0/0:19,0:19:0.38:0,0,135	0/1:9,0:9:10.87:19,0,11	1/1:6,9:16:18.05:247,18,0	0/0:19,0:19:18.06:0,18,417	1/1:6,9:15:15.05:221,15,0	0/1:20,0:19:15.69:16,0,538	0/0:17,0:17:24.08:0,24,478	0/1:27,0:26:79.82:130,0,80	0/0:3,0:3:3.01:0,3,70
chr10	107944892	.	AAGAAAGAG	A	2178.81	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=5.509;DP=513;FS=9.026;HRun=0;HaplotypeScore=134.8925;InbreedingCoeff=0.6955;MQ=57.95;MQ0=6;MQRankSum=-1.300;QD=11.47;ReadPosRankSum=-2.484;VQSLOD=1.6435;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:17.89:0,18,208	1/1:2,0:2:2.98:21,3,0	0/0:7,0:2:5.55:0,6,26	0/0:17,0:9:18.36:0,18,141	0/1:29,0:28:99:176,0,250	0/0:15,0:15:33.18:0,33,397	0/0:18,0:18:43.84:0,44,350	1/1:37,0:34:50.32:396,50,0	0/0:15,0:15:29.95:0,30,684	0/0:21,0:21:54.58:0,55,1082	0/0:19,0:19:50.93:0,51,1015	1/1:20,0:20:11.67:71,12,0	0/0:15,0:15:41.19:0,41,419	0/0:14,0:14:25.56:0,26,282	0/0:19,0:19:42:0,42,430	0/0:23,0:23:54:0,54,500	0/0:32,0:32:58.34:0,58,544	0/1:14,0:14:38.61:39,0,314	1/1:8,0:8:14.94:151,15,0	1/1:24,4:27:56.81:600,57,0	1/1:12,0:12:20.86:181,21,0	0/1:20,0:20:8.58:9,0,334	0/0:17,0:17:48.07:0,48,1097	0/0:18,0:18:35.24:0,35,314	0/0:24,0:24:54.87:0,55,1203	0/0:26,0:26:69.10:0,69,1116	1/1:16,4:18:47.99:729,48,0	0/0:14,0:14:35.97:0,36,600
chr10	107944896	.	AAGAG	A	2206.67	PASS	AB=0.994;AC=22;AF=0.393;AN=56;BaseQRankSum=12.022;DP=536;FS=0.383;HRun=0;HaplotypeScore=104.6666;InbreedingCoeff=0.1887;MQ=57.84;MQ0=5;MQRankSum=-3.190;QD=7.31;ReadPosRankSum=-1.245;VQSLOD=2.4494;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:9:26.72:27,0,71	1/1:2,0:2:2.91:21,3,0	0/0:9,0:3:5.47:0,5,25	0/0:20,0:11:21.66:0,22,175	0/0:29,0:28:21.93:0,22,336	0/1:17,0:17:9.39:214,0,9	0/0:18,0:18:12.92:0,13,291	1/1:18,20:36:64.88:468,65,0	0/0:16,0:16:32.91:0,33,419	0/0:23,0:23:63.52:0,64,858	0/0:21,0:21:56.87:0,57,792	0/1:20,0:20:5.27:79,0,5	0/1:15,0:16:99:100,0,154	0/1:13,0:13:58.32:58,0,95	0/1:19,0:19:19.53:20,0,255	0/1:23,0:23:47.19:47,0,293	0/1:31,0:31:44.38:44,0,313	0/0:14,0:14:25.83:0,26,285	1/1:8,0:8:7.74:55,8,0	1/1:30,0:28:53.36:466,53,0	1/1:12,0:12:2.29:150,2,0	0/1:21,0:21:60.06:60,0,221	0/0:18,0:18:35.65:0,36,755	0/1:20,0:20:65.02:65,0,185	0/0:25,0:25:39.61:0,40,769	0/0:27,0:27:78.12:0,78,984	1/1:23,0:21:51.38:515,51,0	0/0:13,0:13:35.93:0,36,393
chr10	107944898	.	GAGAGAA	G	688.26	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=4.457;DP=534;FS=4.070;HRun=0;HaplotypeScore=128.1025;InbreedingCoeff=0.1055;MQ=58.05;MQ0=5;MQRankSum=-3.731;QD=3.80;ReadPosRankSum=-0.753;VQSLOD=1.9551;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:17.95:0,18,294	0/0:1,0:1:1.82:0,2,5	0/1:11,0:3:0.73:1,0,4	0/0:21,0:11:21.42:0,21,389	0/1:28,0:27:31.44:31,0,829	0/1:17,0:17:2.70:3,0,456	0/0:17,0:17:43.98:0,44,770	0/1:32,0:30:22.78:23,0,164	0/0:16,0:16:33.01:0,33,806	0/0:24,0:24:63.66:0,64,1513	0/0:20,0:20:57.07:0,57,1311	1/1:3,17:20:15.05:320,15,0	0/0:17,0:17:44.27:0,44,711	0/0:13,0:13:25.63:0,26,436	0/0:19,0:19:45.15:0,45,876	0/0:24,0:24:60.20:0,60,1105	0/0:31,0:31:61.64:0,62,1074	0/0:13,0:13:18.07:0,18,618	0/1:8,0:8:40.61:60,0,41	0/1:30,0:28:99:122,0,100	0/1:12,0:12:5.10:5,0,47	0/0:21,0:21:31.79:0,32,800	0/0:18,0:18:54.17:0,54,1331	0/0:21,0:21:47.40:0,47,805	0/0:27,0:27:66.85:0,67,1579	0/0:28,0:28:75.24:0,75,1775	0/1:23,0:22:99:260,0,110	0/0:13,0:13:36.06:0,36,860
chr10	107944921	.	G	GGGGA	1900.86	PASS	AB=0.963;AC=17;AF=0.304;AN=56;BaseQRankSum=10.160;DP=586;FS=5.845;HRun=0;HaplotypeScore=126.3183;InbreedingCoeff=0.5327;MQ=56.92;MQ0=8;MQRankSum=-2.730;QD=8.37;ReadPosRankSum=-7.505;VQSLOD=-0.4331;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:30.02:0,30,433	1/1:2,0:2:3.01:36,3,0	0/0:22,0:10:12.77:0,13,249	0/0:31,0:14:11.15:0,11,153	0/1:33,0:32:36.33:36,0,634	0/1:21,0:21:83.78:84,0,111	0/0:17,0:17:42.46:0,42,487	1/1:32,0:29:33.64:212,34,0	0/0:8,0:8:18.04:0,18,247	0/0:23,0:22:60.15:0,60,834	0/0:21,0:21:40.01:0,40,618	1/1:23,0:23:29.69:151,30,0	0/1:17,0:17:28.70:29,0,279	0/1:11,0:11:14.23:14,0,246	0/0:26,0:26:63.22:0,63,1062	0/0:35,0:35:87.23:0,87,1328	0/0:26,0:26:67.72:0,68,1018	0/0:15,0:15:25.95:0,26,511	1/1:13,3:16:23.55:308,24,0	1/1:26,4:28:15.23:303,15,0	1/1:10,6:16:19.99:441,20,0	0/0:17,0:17:41.80:0,42,536	0/0:19,0:19:50.78:0,51,654	0/0:20,0:20:42.10:0,42,634	0/0:21,0:20:50.93:0,51,756	0/0:30,0:30:84.27:0,84,1353	0/1:20,5:24:63.38:477,0,63	0/0:14,0:13:36.08:0,36,514
chr10	107944943	.	G	GAAGA	3163.49	PASS	AB=1.000;AC=21;AF=0.389;AN=54;BaseQRankSum=0.544;DP=566;FS=0.000;HRun=0;HaplotypeScore=107.8125;InbreedingCoeff=0.7008;MQ=54.62;MQ0=14;MQRankSum=2.148;QD=12.41;ReadPosRankSum=-0.534;VQSLOD=3.0244;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:15:25.28:0,25,387	0/0:2,0:2:2.92:0,3,17	./.	0/1:13,0:4:0:0,0,0	1/1:17,13:32:32.94:540,33,0	1/1:4,12:16:21.07:476,21,0	1/1:11,0:11:8.94:95,9,0	1/1:36,0:25:2.94:18,3,0	0/0:12,0:12:21.01:0,21,232	0/0:22,0:22:30.05:0,30,394	0/0:18,0:18:29.98:0,30,370	0/0:21,0:21:23.51:0,24,201	1/1:8,9:17:9.03:209,9,0	1/1:6,6:12:9.03:205,9,0	0/0:29,0:29:51.14:0,51,717	0/0:26,0:27:39.11:0,39,558	0/0:29,0:30:35.97:0,36,417	0/1:16,0:16:47.86:48,0,196	1/1:18,0:16:15.49:258,15,0	1/1:36,0:35:42.59:480,43,0	1/1:18,0:18:28.30:492,28,0	0/0:18,0:18:27.01:0,27,282	0/0:19,0:19:26.96:0,27,329	0/0:18,0:18:1.20:0,1,246	0/0:22,0:22:30.04:0,30,358	0/0:31,0:32:42.12:0,42,584	0/1:29,0:27:90.21:535,0,90	0/0:16,0:14:17.89:0,18,242
chr10	107944950	.	GAAAGAAAGAAAGAAAGA	G	937.38	PASS	AB=0.750;AC=3;AF=0.054;AN=56;BaseQRankSum=5.324;DP=553;FS=14.639;HRun=0;HaplotypeScore=241.1209;InbreedingCoeff=0.5382;MQ=54.68;MQ0=15;MQRankSum=-5.189;QD=44.64;ReadPosRankSum=0.740;VQSLOD=1.7838;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:33.36:0,33,2795	0/1:2,0:3:34.28:62,0,34	0/0:7,0:4:6.02:0,6,84	0/0:9,0:2:3.48:0,3,43	0/0:30,0:30:81.19:0,81,4075	0/0:16,0:16:30.10:0,30,1838	0/0:10,0:10:24.08:0,24,1273	0/0:37,0:24:72.24:0,72,2175	0/0:11,0:11:33.11:0,33,1996	0/0:23,0:23:66.22:0,66,3633	0/0:19,0:19:48.16:0,48,2799	1/1:10,7:18:24.08:980,24,0	0/0:18,0:18:33.11:0,33,1545	0/0:14,0:14:30.10:0,30,1363	0/0:27,0:27:75.26:0,75,4639	0/0:27,0:27:78.25:0,78,4428	0/0:29,0:29:81.27:0,81,4553	0/0:18,0:18:51.17:0,51,2531	0/0:17,0:15:33.04:0,33,1828	0/0:35,0:34:90.31:0,90,5565	0/0:18,0:18:54.18:0,54,2951	0/0:17,0:17:48.16:0,48,2517	0/0:16,0:16:48.16:0,48,2571	0/0:19,0:19:54.18:0,54,3031	0/0:21,0:21:57.19:0,57,3575	0/0:29,0:29:87.28:0,87,4736	0/0:32,0:30:96.33:0,96,6145	0/0:17,0:15:45.15:0,45,2038
chr10	107945234	.	AGAGGGAGGCC	A	1284.81	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.834;DP=530;FS=12.397;HRun=0;HaplotypeScore=160.4532;InbreedingCoeff=0.9687;MQ=68.94;MQ0=2;MQRankSum=-6.174;QD=67.62;ReadPosRankSum=2.110;VQSLOD=3.1709;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.28:0,81,4077	1/1:1,5:6:9.03:300,9,0	0/0:22,0:19:54.19:0,54,2368	0/0:14,0:13:39.12:0,39,1579	0/0:19,0:19:54.19:0,54,2679	0/0:23,0:23:69.24:0,69,3521	0/0:13,0:13:39.13:0,39,1773	0/0:30,0:30:84.27:0,84,3001	0/0:18,0:18:51.18:0,51,2568	0/0:17,0:16:45.15:0,45,2315	0/0:11,0:11:33.11:0,33,1749	1/1:0,13:13:33.11:1099,33,0	0/0:12,0:12:36.12:0,36,1900	0/0:21,0:21:54.19:0,54,2656	0/0:25,0:25:75.26:0,75,3997	0/0:28,0:28:78.27:0,78,3943	0/0:28,0:28:78.25:0,78,3825	0/0:22,0:22:66.23:0,66,3251	0/0:18,0:17:51.17:0,51,1800	0/0:26,0:26:75.26:0,75,3134	0/0:23,0:23:69.22:0,69,2797	0/0:15,0:15:42.14:0,42,2173	0/0:16,0:16:48.16:0,48,2463	0/0:18,0:18:48.16:0,48,2479	0/0:17,0:17:45.15:0,45,2342	0/0:15,0:15:39.13:0,39,1830	0/0:20,0:20:60.18:0,60,2191	0/0:12,0:12:36.12:0,36,1918
chr10	107945383	.	A	AAC	3846.33	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-2.392;DP=573;FS=0.406;HRun=0;HaplotypeScore=82.6169;InbreedingCoeff=0.8336;MQ=75.48;MQ0=14;MQRankSum=0.166;QD=30.05;ReadPosRankSum=-3.094;VQSLOD=4.0857;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:82.78:0,83,1026	0/1:13,0:12:30.39:92,0,30	0/0:47,0:16:10.49:0,10,267	0/0:39,0:21:9.56:0,10,159	0/0:25,0:24:55.91:0,56,769	0/0:25,0:25:72.11:0,72,866	0/0:12,0:12:27.04:0,27,321	1/1:6,29:39:99:1388,104,0	0/0:16,0:16:42.08:0,42,525	0/0:23,0:22:62.75:0,63,753	0/0:30,0:30:85.91:0,86,944	1/1:0,0:10:15.05:186,15,0	0/0:14,0:14:33.02:0,33,404	0/0:4,0:4:12.04:0,12,148	0/0:20,0:21:62.60:0,63,728	0/0:24,0:24:60.03:0,60,720	0/0:24,0:24:63.11:0,63,764	0/0:25,0:25:28.93:0,29,603	1/1:1,18:21:49.98:790,50,0	1/1:4,12:21:57.52:862,58,0	1/1:1,0:4:3.01:38,3,0	0/0:14,0:14:41.53:0,42,469	0/0:15,0:15:41.61:0,42,511	0/0:11,0:11:26.53:0,27,284	0/0:15,0:14:41.60:0,42,497	0/0:18,0:18:53.49:0,53,638	1/1:1,16:17:30.02:489,30,0	0/0:12,0:12:13.38:0,13,351
chr10	107946396	.	TGA	T	204.07	PASS	AB=0.888;AC=12;AF=0.250;AN=48;BaseQRankSum=2.639;DP=392;FS=3.989;HRun=0;HaplotypeScore=57.8460;InbreedingCoeff=-0.1830;MQ=75.56;MQ0=9;MQRankSum=1.040;QD=1.47;ReadPosRankSum=1.999;VQSLOD=1.3265;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:6.01:0,6,71	./.	./.	0/0:36,0:16:0:0,0,0	0/0:13,0:13:15.04:0,15,201	0/0:11,0:11:12.03:0,12,158	0/1:9,3:13:84.31:84,0,171	0/0:20,0:20:5.81:0,6,48	1/1:6,0:9:5.52:25,6,0	0/0:9,0:9:18.04:0,18,217	0/1:10,0:10:5.36:5,0,181	0/0:12,0:12:3.01:0,3,33	0/1:13,2:15:46.75:47,0,159	0/1:7,1:8:20.37:20,0,121	0/0:10,0:16:5.57:0,6,44	0/1:17,1:18:2.37:2,0,309	0/1:24,2:26:58.08:58,0,319	0/0:18,0:19:3.97:0,4,252	0/0:11,0:11:8.94:0,9,98	./.	0/0:17,0:17:5.98:0,6,47	0/1:11,0:11:11.34:11,0,221	0/1:4,2:6:26.44:26,0,37	0/1:15,1:16:20.36:20,0,121	0/1:5,1:7:34.50:35,0,73	0/0:17,0:17:27.03:0,27,319	0/0:13,0:14:8.78:0,9,55	./.
chr10	107946471	.	AT	A	1307.43	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.514;DP=300;FS=0.000;HRun=7;HaplotypeScore=36.6405;InbreedingCoeff=0.8348;MQ=62.96;MQ0=1;MQRankSum=-4.458;QD=20.43;ReadPosRankSum=-1.494;VQSLOD=2.2023;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.12:0,39,480	0/0:8,0:8:15.05:0,15,189	0/0:7,0:5:12:0,12,131	0/0:11,0:7:17.95:0,18,190	0/0:17,0:17:42.13:0,42,528	0/0:11,0:11:33.11:0,33,415	0/0:6,0:6:12.51:0,13,152	1/1:6,23:28:65.23:665,65,0	0/0:5,0:5:6.02:0,6,75	0/0:10,0:10:27.08:0,27,330	0/0:8,0:8:24.07:0,24,289	1/1:2,1:3:3:31,3,0	0/0:5,0:5:12.04:0,12,151	0/0:6,0:6:9.03:0,9,113	0/0:8,0:8:15.05:0,15,189	0/0:9,0:9:15.05:0,15,189	0/0:22,0:22:60.14:0,60,721	0/0:15,0:15:39.08:0,39,471	1/1:3,13:15:39.08:392,39,0	1/1:0,5:5:15.03:153,15,0	1/1:2,4:6:12.02:121,12,0	0/0:4,0:4:6.02:0,6,76	0/0:8,0:8:21.54:0,22,265	0/0:2,0:2:3:0,3,25	0/0:20,0:20:54.16:0,54,667	0/0:12,0:12:33.11:0,33,415	1/1:1,4:5:12.02:120,12,0	0/0:29,0:29:87.28:0,87,1094
chr10	107946483	.	G	GATTTATTT	2152.61	PASS	AB=1.000;AC=13;AF=0.271;AN=48;BaseQRankSum=2.395;DP=292;FS=0.911;HRun=0;HaplotypeScore=78.2014;InbreedingCoeff=0.7127;MQ=60.02;MQ0=1;MQRankSum=-7.125;QD=24.19;ReadPosRankSum=-2.964;VQSLOD=2.3890;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:33.11:0,33,827	1/1:3,0:6:3.01:105,3,0	./.	./.	0/0:14,0:14:21.02:0,21,427	0/0:13,0:13:21.07:0,21,532	0/0:5,0:5:12.03:0,12,250	1/1:37,0:36:24.08:852,24,0	0/0:3,0:3:6.02:0,6,152	0/0:7,0:7:6.02:0,6,152	0/0:7,0:7:9.03:0,9,222	./.	0/0:6,0:6:12.04:0,12,304	0/0:3,0:3:3.01:0,3,76	0/0:6,0:6:12.04:0,12,303	0/0:7,0:7:15.05:0,15,380	0/0:22,0:22:54.19:0,54,1339	0/0:16,0:16:39.06:0,39,814	1/1:16,4:19:21.02:662,21,0	1/1:4,2:5:6.02:247,6,0	1/1:3,1:4:3.01:123,3,0	0/0:2,0:2:3.01:0,3,76	0/1:8,0:8:0:0,0,0	./.	0/0:19,0:19:39.13:0,39,926	0/0:12,0:12:12.04:0,12,304	1/1:8,0:8:9.03:316,9,0	0/0:31,0:30:36.05:0,36,701
chr10	107948207	.	A	AT	668.18	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.659;DP=806;FS=0.916;HRun=1;HaplotypeScore=84.1060;InbreedingCoeff=0.9998;MQ=85.51;MQ0=1;MQRankSum=-2.423;QD=33.41;ReadPosRankSum=-0.848;VQSLOD=3.1405;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,147,1836	1/1:1,19:20:51.17:763,51,0	0/0:22,0:22:60.13:0,60,712	0/0:29,0:29:77.42:0,77,807	0/0:32,0:32:84.26:0,84,1074	0/0:20,0:20:60.18:0,60,764	0/0:28,0:28:84.25:0,84,1065	0/0:21,0:21:63.20:0,63,806	0/0:25,0:25:75.22:0,75,945	0/0:25,0:25:72.22:0,72,918	0/0:22,0:22:66.19:0,66,828	0/0:42,0:42:99:0,126,1568	0/0:23,0:23:69.19:0,69,856	0/0:23,0:23:66.19:0,66,828	0/0:37,0:37:99:0,108,1374	0/0:39,0:39:99:0,111,1411	0/0:43,0:43:99:0,129,1657	0/0:34,0:34:96.26:0,96,1211	0/0:12,0:12:36.05:0,36,410	0/0:28,0:28:81.21:0,81,1002	0/0:47,0:47:99:0,138,1759	0/0:22,0:22:66.21:0,66,848	0/0:21,0:21:63.17:0,63,787	0/0:34,0:33:96.22:0,96,1180	0/0:26,0:26:75.21:0,75,940	0/0:36,0:36:99:0,105,1337	0/0:32,0:32:84.27:0,84,1090	0/0:14,0:14:42.11:0,42,516
chr10	107948738	.	AAGAG	A	258.71	PASS	AB=0.967;AC=10;AF=0.192;AN=52;BaseQRankSum=1.145;DP=708;FS=32.103;HRun=0;HaplotypeScore=109.3048;InbreedingCoeff=0.3350;MQ=49.03;MQ0=33;MQRankSum=-0.080;QD=1.60;ReadPosRankSum=-1.271;VQSLOD=-0.0154;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:33:12.32:12,0,461	1/1:5,0:9:3:28,3,0	./.	./.	0/0:16,0:16:8.80:0,9,80	0/0:25,0:27:26.68:0,27,406	0/0:26,0:26:28.54:0,29,471	0/0:35,0:34:12.47:0,12,149	0/0:28,0:29:35.48:0,35,559	0/0:21,0:20:15.02:0,15,240	1/1:11,1:11:8.92:105,9,0	1/1:28,8:35:14.80:201,15,0	0/0:25,0:25:32.72:0,33,534	0/0:15,0:15:7.58:0,8,116	0/0:20,0:20:26.38:0,26,431	0/1:24,0:24:19.30:19,0,465	0/0:26,0:27:50.87:0,51,830	0/1:23,0:25:16.37:16,0,466	0/0:23,0:23:16.86:0,17,263	0/0:8,0:8:6.02:0,6,112	0/0:36,0:36:24.95:0,25,398	0/0:10,0:10:3.01:0,3,70	0/0:14,0:14:15.02:0,15,217	0/0:19,0:20:20.10:0,20,313	0/0:12,0:12:6.02:0,6,135	0/1:21,0:21:20.17:20,0,282	0/0:21,0:22:29.95:0,30,448	0/0:8,0:8:9.03:0,9,157
chr10	107949385	.	CT	C	574.73	PASS	AB=0.684;AC=11;AF=0.204;AN=54;BaseQRankSum=3.783;DP=311;FS=8.700;HRun=8;HaplotypeScore=37.3218;InbreedingCoeff=0.7135;MQ=35.92;MQ0=57;MQRankSum=-4.207;QD=10.64;ReadPosRankSum=0.721;VQSLOD=0.7393;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:17:24.54:0,25,285	0/0:2,0:2:3.01:0,3,33	./.	0/0:4,0:2:2.74:0,3,12	0/0:15,0:12:18.04:0,18,203	0/0:25,1:21:9.36:0,9,375	0/0:11,0:9:18.05:0,18,212	1/1:4,4:5:11.69:115,12,0	0/0:8,0:8:18.06:0,18,217	0/0:13,0:13:20.97:0,21,210	0/0:5,0:5:3.01:0,3,36	1/1:1,7:8:21.03:200,21,0	0/0:5,0:4:12.03:0,12,132	0/0:5,0:5:15.05:0,15,181	0/0:14,0:13:22.31:0,22,257	0/0:12,0:11:23.96:0,24,257	0/0:25,0:22:48.77:0,49,514	0/0:19,0:17:37.48:0,37,389	1/1:6,2:3:6.01:58,6,0	1/1:0,7:6:18.03:173,18,0	0/1:7,6:7:3.36:75,0,3	0/0:4,0:4:9.02:0,9,102	0/0:4,0:4:5.88:0,6,51	0/0:18,0:16:29.81:0,30,278	0/0:15,0:12:15.05:0,15,181	0/0:13,0:10:24.54:0,25,290	1/1:6,4:6:12:116,12,0	0/0:12,0:7:7.23:0,7,52
chr10	107949464	.	G	GC	1047.09	PASS	AB=0.875;AC=16;AF=0.286;AN=56;BaseQRankSum=5.524;DP=298;FS=3.976;HRun=9;HaplotypeScore=45.1944;InbreedingCoeff=0.6486;MQ=63.17;MQ0=3;MQRankSum=-2.268;QD=10.58;ReadPosRankSum=-1.702;VQSLOD=1.5830;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:41.92:0,42,355	1/1:2,0:2:2.84:14,3,0	0/0:19,0:7:17.23:0,17,116	0/1:24,0:11:15.41:15,0,50	0/0:15,0:15:18.93:0,19,193	0/0:21,0:21:20.45:0,20,325	0/0:4,0:4:8.97:0,9,73	1/1:10,7:15:27.06:285,27,0	0/0:6,0:6:5.96:0,6,46	0/0:9,0:9:26.99:0,27,233	0/0:9,0:9:20.83:0,21,168	1/1:2,4:6:15.04:159,15,0	0/0:3,0:3:8.74:0,9,64	0/1:2,0:3:17.81:30,0,18	0/0:3,0:3:8.99:0,9,76	0/0:6,0:6:11.99:0,12,102	0/0:25,0:25:59.74:0,60,502	0/0:25,0:25:59.81:0,60,494	1/1:14,5:17:6.66:231,7,0	1/1:6,2:7:15.21:139,15,0	1/1:5,1:5:5.95:50,6,0	0/0:1,0:1:3:0,3,26	0/0:1,0:1:3:0,3,26	0/0:8,0:8:20.98:0,21,179	0/0:9,0:9:26.98:0,27,227	0/0:6,0:6:17.99:0,18,155	1/1:6,8:14:29.69:306,30,0	0/0:8,0:8:17.72:0,18,134
chr10	107950911	.	CG	C	106.27	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.374;DP=530;FS=0.000;HRun=2;HaplotypeScore=53.4411;InbreedingCoeff=0.9769;MQ=81.53;MQ0=0;MQRankSum=-0.452;QD=21.25;ReadPosRankSum=0.090;VQSLOD=3.2870;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1568	1/1:0,5:5:15.05:195,15,0	0/0:15,0:15:44.16:0,44,608	0/0:19,0:19:40.38:0,40,660	0/0:18,0:18:54.17:0,54,784	0/0:26,0:26:78.23:0,78,1124	0/0:16,0:16:48.16:0,48,713	0/0:26,0:26:75.25:0,75,1119	0/0:24,0:24:72.23:0,72,1056	0/0:19,0:19:57.18:0,57,815	0/0:8,0:8:24.08:0,24,360	0/0:21,0:21:63.21:0,63,939	0/0:15,0:15:45.14:0,45,650	0/0:10,0:10:27.07:0,27,382	0/0:20,0:20:57.19:0,57,854	0/0:20,0:20:60.18:0,60,854	0/0:25,0:24:66.22:0,66,988	0/0:23,0:23:66.22:0,66,988	0/0:18,0:18:51.13:0,51,701	0/0:16,0:16:45.15:0,45,672	0/0:22,0:22:63.19:0,63,899	0/0:27,0:27:78.26:0,78,1167	0/0:8,0:8:24.08:0,24,359	0/0:23,0:23:69.18:0,69,987	0/0:16,0:16:48.16:0,48,718	0/0:20,0:20:60.20:0,60,891	0/0:27,0:27:78.20:0,78,1083	0/0:8,0:8:24.08:0,24,359
chr10	107951591	.	GT	G	2918.49	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.782;DP=741;FS=0.368;HRun=9;HaplotypeScore=81.4883;InbreedingCoeff=0.9562;MQ=71.10;MQ0=2;MQRankSum=-0.880;QD=20.27;ReadPosRankSum=1.393;VQSLOD=4.2283;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,165,1861	0/0:9,0:9:27.08:0,27,312	0/0:28,0:21:22.91:0,23,419	0/0:24,0:23:38.06:0,38,403	0/0:26,0:26:75.18:0,75,842	0/0:25,0:25:69.19:0,69,785	0/0:34,0:34:96.27:0,96,1098	1/1:2,18:20:52.82:484,53,0	0/0:19,0:19:57.16:0,57,649	0/0:27,0:27:69.19:0,69,780	0/0:18,2:20:2.24:0,2,533	1/1:0,25:25:69.04:632,69,0	0/0:20,0:20:51.13:0,51,576	0/0:25,0:25:60.18:0,60,692	0/0:37,0:37:99:0,99,1130	0/0:31,0:31:87.26:0,87,1003	0/0:32,0:32:93.25:0,93,1053	0/0:34,0:34:96.27:0,96,1093	1/1:5,11:16:13.95:231,14,0	1/1:0,20:20:48.01:439,48,0	1/1:8,31:39:81.04:741,81,0	0/0:25,0:25:68.92:0,69,740	0/0:16,0:16:45.13:0,45,519	0/0:32,0:32:93.25:0,93,1055	0/0:21,0:21:57.13:0,57,635	0/0:42,0:43:99:0,111,1260	1/1:2,22:24:63.03:577,63,0	0/0:10,0:10:27.08:0,27,311
chr10	107951937	.	TTTGGC	T	7104.66	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.898;DP=711;FS=8.225;HRun=0;HaplotypeScore=140.6968;InbreedingCoeff=0.9997;MQ=84.37;MQ0=0;MQRankSum=-11.102;QD=50.03;ReadPosRankSum=-1.054;VQSLOD=4.2651;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,157,4802	0/0:10,0:10:30.10:0,30,910	0/0:23,0:23:60.68:0,61,1696	0/0:24,0:24:61.76:0,62,1668	0/0:30,0:30:87.30:0,87,2676	0/0:17,0:17:48.16:0,48,1445	0/0:29,0:29:75.24:0,75,2216	1/1:5,22:27:66.23:1370,66,0	0/0:20,0:20:60.21:0,60,1852	0/0:33,0:33:93.31:0,93,2697	0/0:21,0:21:60.19:0,60,1762	1/1:1,27:28:69.24:1448,69,0	0/0:21,0:21:57.20:0,57,1745	0/0:22,0:22:66.23:0,66,2046	0/0:40,0:40:99:0,114,3382	0/0:30,0:30:84.29:0,84,2532	0/0:31,0:31:90.31:0,90,2785	0/0:18,0:18:48.14:0,48,1384	1/1:2,21:23:63.21:1270,63,0	1/1:2,31:33:87.17:1696,87,0	1/1:3,12:15:30.10:629,30,0	0/0:18,0:18:51.18:0,51,1540	0/0:23,0:23:66.23:0,66,1959	0/0:33,0:33:93.32:0,93,2723	0/0:22,0:22:54.19:0,54,1590	0/0:31,0:31:90.31:0,90,2719	1/1:1,15:16:33.11:692,33,0	0/0:17,0:17:51.17:0,51,1480
chr10	107952414	.	T	TG	3532.31	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.686;DP=666;FS=9.359;HRun=7;HaplotypeScore=94.2690;InbreedingCoeff=0.9980;MQ=69.36;MQ0=2;MQRankSum=-3.385;QD=22.22;ReadPosRankSum=-1.995;VQSLOD=2.1549;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:83.97:0,84,788	0/0:14,0:14:26.17:0,26,147	0/0:22,0:19:40.72:0,41,437	0/0:22,0:20:44.77:0,45,426	0/0:17,0:17:48.55:0,49,462	0/0:23,0:23:57.07:0,57,544	0/0:35,0:35:90.10:0,90,856	1/1:4,22:24:60.14:705,60,0	0/0:26,0:26:60.04:0,60,567	0/0:27,0:27:63.08:0,63,604	0/0:17,0:17:45.07:0,45,434	1/1:22,0:36:29.62:289,30,0	0/0:30,0:30:81.08:0,81,772	0/0:16,0:16:30.03:0,30,289	0/0:26,0:26:66.09:0,66,637	0/0:29,0:29:69.10:0,69,666	0/0:25,0:25:72.12:0,72,695	0/0:17,0:17:47.22:0,47,422	1/1:7,14:21:54.14:635,54,0	1/1:4,13:17:24.07:290,24,0	1/1:12,21:33:50.82:831,51,0	0/0:14,0:14:26.98:0,27,243	0/0:23,0:23:60.10:0,60,578	0/0:44,0:44:99:0,114,1093	0/0:16,0:16:42.02:0,42,405	0/0:19,0:19:51.08:0,51,491	1/1:4,21:25:66.19:781,66,0	0/0:8,0:8:21.03:0,21,203
chr10	107952476	.	TA	T	5404.63	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=16.612;DP=644;FS=6.068;HRun=1;HaplotypeScore=86.5960;InbreedingCoeff=0.9995;MQ=78.01;MQ0=0;MQRankSum=-6.632;QD=36.03;ReadPosRankSum=-0.172;VQSLOD=4.6801;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1721	0/0:8,0:8:24.08:0,24,383	0/0:17,0:16:48.15:0,48,730	0/0:25,0:25:61.84:0,62,1061	0/0:12,0:12:36.12:0,36,575	0/0:23,0:23:63.21:0,63,1004	0/0:26,0:26:75.24:0,75,1176	1/1:0,22:22:66.15:811,66,0	0/0:23,0:23:69.22:0,69,1071	0/0:21,0:21:63.21:0,63,1006	0/0:21,0:21:63.21:0,63,1001	1/1:0,38:38:99:1342,105,0	0/0:24,0:24:72.25:0,72,1147	0/0:20,0:20:60.20:0,60,959	0/0:45,0:45:99:0,135,2107	0/0:25,0:25:75.26:0,75,1196	0/0:27,0:27:81.28:0,81,1294	0/0:16,0:16:48.16:0,48,763	1/1:2,17:19:48.13:607,48,0	1/1:0,15:15:45.09:564,45,0	1/1:0,18:18:51.11:642,51,0	0/0:14,0:14:42.13:0,42,646	0/0:20,0:20:60.20:0,60,956	0/0:33,0:33:99:0,99,1527	0/0:27,0:27:81.28:0,81,1293	0/0:18,0:18:54.18:0,54,863	1/1:0,38:38:99:1439,111,0	0/0:11,0:11:33.11:0,33,527
chr10	107952837	.	GATAGATAGATAGATAA	G	2329.29	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.580;DP=604;FS=0.000;HRun=0;HaplotypeScore=265.5856;InbreedingCoeff=0.9876;MQ=64.37;MQ0=5;MQRankSum=-6.176;QD=19.25;ReadPosRankSum=0.964;VQSLOD=2.2250;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:63.09:0,63,2305	0/0:8,0:8:17.98:0,18,520	0/0:20,0:17:17.18:0,17,206	0/0:15,0:13:17.16:0,17,182	0/0:26,0:26:66.10:0,66,2724	0/0:24,0:24:60.06:0,60,2033	0/0:14,0:14:33.06:0,33,742	1/1:22,0:20:29.95:255,30,0	0/0:17,0:17:45.11:0,45,2393	0/0:23,0:22:51.10:0,51,2416	0/0:21,0:21:51.16:0,51,3240	1/1:27,0:27:65.20:633,65,0	0/0:18,0:18:54.11:0,54,2054	0/0:22,0:22:54.02:0,54,1481	0/0:29,0:29:75.18:0,75,3254	0/0:28,0:28:69.19:0,69,3572	0/0:26,0:26:54.05:0,54,2056	0/0:16,0:16:39.06:0,39,1706	1/1:8,12:20:35.79:380,36,0	1/1:12,0:12:29.77:227,30,0	1/1:14,0:13:11.95:94,12,0	0/0:23,0:23:57.13:0,57,2234	0/0:18,0:18:39.08:0,39,1698	0/0:23,0:23:42.02:0,42,1865	0/0:27,0:27:72.17:0,72,3442	0/0:30,0:29:66.14:0,66,3600	1/1:22,4:26:65.35:927,65,0	0/0:21,0:21:51.12:0,51,2652
chr10	107952853	.	A	AATAG	666.07	PASS	AC=6;AF=0.120;AN=50;BaseQRankSum=-1.265;DP=527;FS=3.680;HRun=0;HaplotypeScore=121.6845;InbreedingCoeff=0.7044;MQ=58.05;MQ0=5;MQRankSum=-2.591;QD=13.59;ReadPosRankSum=-1.210;VQSLOD=3.2208;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,14:28:27.06:553,27,0	1/1:2,4:6:12.04:216,12,0	./.	./.	0/0:23,0:23:27.09:0,27,416	0/0:25,0:25:23.84:0,24,307	0/0:14,0:14:9.02:0,9,118	1/1:14,0:12:2.97:20,3,0	0/0:18,0:18:30.08:0,30,432	0/0:20,0:20:33.10:0,33,491	0/0:18,0:18:33.11:0,33,507	0/0:22,0:22:6.01:0,6,56	0/0:19,0:19:18.06:0,18,278	0/0:17,0:17:6.02:0,6,90	0/0:28,0:28:30.09:0,30,432	0/0:24,0:24:39.13:0,39,600	0/0:22,0:22:15.20:0,15,331	0/0:15,0:15:20.99:0,21,247	0/0:16,0:15:3:0,3,28	./.	0/0:10,0:9:2.03:0,2,26	0/0:20,0:20:21.06:0,21,297	0/0:13,0:13:21.07:0,21,324	0/0:20,0:20:21.07:0,21,314	0/0:27,0:27:33.10:0,33,488	0/0:26,0:25:51.15:0,51,745	0/0:26,0:26:11.61:0,12,110	0/0:18,0:18:30.08:0,30,441
chr10	107952911	.	T	TCCC	2622.37	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.611;DP=538;FS=0.000;HRun=0;HaplotypeScore=110.1305;InbreedingCoeff=0.9474;MQ=50.17;MQ0=20;MQRankSum=-12.521;QD=24.51;ReadPosRankSum=1.425;VQSLOD=3.4076;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:33.06:0,33,516	0/0:6,0:6:15.02:0,15,144	0/0:23,0:6:12:0,12,144	0/0:12,0:3:4.03:0,4,16	0/0:26,0:26:72.20:0,72,1158	0/0:18,0:18:45.15:0,45,798	0/0:13,0:13:33.08:0,33,560	1/1:29,1:28:83.28:731,83,0	0/0:18,0:18:42.12:0,42,695	0/0:21,0:21:58.44:0,58,996	0/0:22,0:22:63.21:0,63,1054	1/1:13,0:13:39.11:577,39,0	0/0:15,0:15:36.12:0,36,653	0/0:9,0:9:24.08:0,24,413	0/0:16,0:15:36.11:0,36,584	0/0:30,0:30:87.29:0,87,1532	0/0:19,0:18:39.13:0,39,671	0/0:16,0:15:42.14:0,42,694	1/1:18,0:18:41.30:366,41,0	1/1:14,2:16:41.40:496,41,0	1/1:8,0:8:8.29:134,8,0	0/0:18,0:18:51.17:0,51,891	0/0:23,0:23:63.20:0,63,1047	0/0:22,0:22:42.13:0,42,745	0/0:23,0:23:57.17:0,57,944	0/0:34,0:34:96.32:0,96,1657	1/1:20,2:22:59.02:503,59,0	0/0:20,0:19:54.18:0,54,955
chr10	107957073	.	G	GCTTCTCC	716.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.550;DP=554;FS=9.924;HRun=0;HaplotypeScore=137.3262;InbreedingCoeff=0.9605;MQ=83.57;MQ0=0;MQRankSum=-4.473;QD=89.61;ReadPosRankSum=-0.366;VQSLOD=4.0528;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:84.27:0,84,1940	1/1:0,8:8:21.07:809,21,0	0/0:18,0:18:44.99:0,45,936	0/0:23,0:23:51.16:0,51,974	0/0:13,0:13:33.11:0,33,798	0/0:19,0:19:57.20:0,57,1397	0/0:28,0:28:69.22:0,69,1627	0/0:27,0:26:57.13:0,57,1159	0/0:27,0:27:75.26:0,75,1805	0/0:16,0:16:39.11:0,39,785	0/0:12,0:12:27.09:0,27,645	0/0:17,0:17:51.13:0,51,1184	0/0:10,0:10:30.10:0,30,715	0/0:13,0:13:36.12:0,36,845	0/0:23,0:23:60.21:0,60,1458	0/0:24,0:24:69.21:0,69,1554	0/0:26,0:26:69.20:0,69,1552	0/0:26,0:26:72.13:0,72,1564	0/0:17,0:17:29.87:0,30,686	0/0:12,0:12:27.09:0,27,631	0/0:39,0:39:84.29:0,84,2058	0/0:11,0:11:30.10:0,30,743	0/0:10,0:10:24.08:0,24,569	0/0:36,0:36:96.29:0,96,2253	0/0:21,0:21:57.19:0,57,1300	0/0:13,0:13:36.12:0,36,874	0/0:21,0:21:48.16:0,48,1190	0/0:9,0:9:12.04:0,12,266
chr10	107957137	.	C	CTT	2766	PASS	AB=0.606;AC=11;AF=0.196;AN=56;BaseQRankSum=-5.397;DP=510;FS=13.545;HRun=10;HaplotypeScore=69.0535;InbreedingCoeff=0.8843;MQ=69.31;MQ0=0;MQRankSum=-0.214;QD=22.86;ReadPosRankSum=-3.955;VQSLOD=0.5413;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:75.08:0,75,763	0/0:8,0:9:11.75:0,12,174	0/0:5,0:5:5.83:0,6,43	0/0:11,0:9:8.65:0,9,81	0/0:14,0:14:23.75:0,24,290	0/0:20,0:20:42.01:0,42,420	0/0:15,0:15:36.05:0,36,366	1/1:7,25:34:75.23:1057,75,0	0/0:21,0:22:35.71:0,36,529	0/0:20,0:20:54.06:0,54,538	0/0:12,0:12:33.06:0,33,336	0/1:7,9:20:2.18:252,0,2	0/0:10,0:10:27.04:0,27,267	0/0:17,0:18:50.83:0,51,493	0/0:20,0:21:54.08:0,54,543	0/0:17,0:20:22.64:0,23,466	0/0:32,0:35:98.67:0,99,961	0/0:24,0:25:54.27:0,54,531	1/1:9,5:14:15.05:222,15,0	1/1:7,9:18:35.51:416,36,0	1/1:3,13:16:30.10:447,30,0	0/0:8,0:8:18.03:0,18,183	0/0:11,0:11:30.03:0,30,298	0/0:11,0:11:27.05:0,27,275	0/0:29,0:30:71.87:0,72,779	0/0:24,0:25:65.85:0,66,647	1/1:3,14:19:39.12:549,39,0	0/0:15,0:15:45.10:0,45,457
chr10	107957723	.	ACT	A	1669.16	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.066;DP=678;FS=6.913;HRun=0;HaplotypeScore=142.7730;InbreedingCoeff=0.9869;MQ=79.43;MQ0=0;MQRankSum=-1.289;QD=34.77;ReadPosRankSum=4.245;VQSLOD=5.1737;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,2159	0/0:8,0:8:18.95:0,19,314	0/0:15,0:15:39.13:0,39,687	0/0:20,0:20:54.18:0,54,934	0/0:18,0:18:51.17:0,51,910	0/0:16,0:16:45.15:0,45,810	0/0:34,0:34:99:0,99,1774	0/0:23,0:23:66.19:0,66,1154	0/0:18,0:18:48.16:0,48,864	0/0:20,0:20:57.19:0,57,967	0/0:12,0:12:30.10:0,30,540	1/1:1,47:48:99:1764,126,0	0/0:23,0:23:69.17:0,69,1162	0/0:25,0:25:75.26:0,75,1332	0/0:46,0:46:99:0,132,2350	0/0:35,0:35:99:0,102,1828	0/0:23,0:23:63.22:0,63,1112	0/0:32,0:32:90.29:0,90,1591	0/0:20,0:20:57.19:0,57,999	0/0:16,0:16:45.15:0,45,809	0/0:66,0:66:99:0,187,3234	0/0:8,0:8:24.08:0,24,421	0/0:15,0:15:45.15:0,45,806	0/0:26,0:26:72.18:0,72,1195	0/0:15,0:15:39.12:0,39,664	0/0:28,0:28:84.29:0,84,1509	0/0:19,0:19:57.20:0,57,1008	0/0:7,0:7:21.07:0,21,367
chr10	107959738	.	A	AG	781.10	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=2.303;DP=406;FS=2.065;HRun=6;HaplotypeScore=51.9720;InbreedingCoeff=0.7926;MQ=81.77;MQ0=1;MQRankSum=-0.035;QD=6.68;ReadPosRankSum=-1.810;VQSLOD=-0.7474;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:49.99:0,50,476	0/0:4,0:4:0.47:0,0,1	0/1:25,0:15:3.37:3,0,176	0/0:19,0:15:21.49:0,21,153	0/0:9,0:9:23.90:0,24,207	0/0:11,0:11:29.60:0,30,241	0/0:12,0:12:35.97:0,36,340	1/1:21,0:21:46.70:358,47,0	0/0:9,0:9:14.94:0,15,134	0/0:6,0:6:14.93:0,15,125	0/0:4,0:4:9.01:0,9,85	1/1:2,13:15:16.04:212,16,0	0/0:11,0:11:26.89:0,27,227	0/0:20,0:20:48.01:0,48,446	0/0:16,0:16:35.87:0,36,313	0/0:13,0:13:29.78:0,30,275	0/0:29,0:29:68.55:0,69,582	0/0:33,0:33:80.64:0,81,693	1/1:13,2:15:23.05:161,23,0	1/1:3,0:3:2.13:5,2,0	1/1:26,0:26:31.19:174,31,0	0/0:10,0:10:14.86:0,15,120	0/0:8,0:8:23.94:0,24,213	0/0:20,0:20:47.84:0,48,413	0/0:9,0:9:17.96:0,18,153	0/0:13,0:13:32.97:0,33,299	1/1:12,0:12:2.01:34,2,0	0/0:6,0:6:12:0,12,108
chr10	107962804	.	C	CT	4594.09	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-10.994;DP=396;FS=70.047;HRun=0;HaplotypeScore=50.2607;InbreedingCoeff=0.8901;MQ=81.66;MQ0=2;MQRankSum=-0.528;QD=28.89;ReadPosRankSum=9.569;VQSLOD=0.5371;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:44.82:0,45,378	1/1:1,11:12:16.15:406,16,0	0/0:15,0:13:35.69:0,36,347	0/0:21,0:19:33.37:0,33,327	0/1:3,0:3:0.02:0,0,0	0/0:11,0:11:23.98:0,24,201	0/0:13,0:13:26.98:0,27,241	1/1:3,23:26:61.93:673,62,0	0/0:20,0:20:46.17:0,46,404	0/0:9,0:9:20.96:0,21,183	0/0:8,0:8:15.86:0,16,128	1/1:1,37:38:78.81:1039,79,0	0/0:5,0:5:6:0,6,51	0/0:10,0:10:20.98:0,21,214	0/0:15,0:15:32.96:0,33,283	0/0:8,0:8:14.94:0,15,131	0/0:26,0:26:54.68:0,55,478	0/0:12,0:12:28.28:0,28,233	1/1:2,20:22:59.95:667,60,0	1/1:0,8:8:23.75:283,24,0	1/1:1,30:31:78.24:1008,78,0	0/0:2,0:2:2.97:0,3,20	0/0:12,0:12:22.82:0,23,202	0/0:13,0:13:23.71:0,24,210	0/0:9,0:9:14.95:0,15,122	0/0:6,0:6:14.94:0,15,149	1/1:0,18:19:41.97:518,42,0	0/0:3,0:3:6:0,6,51
chr10	107966283	.	G	GGCAGGCAA	1675.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.778;DP=613;FS=0.000;HRun=0;HaplotypeScore=159.2751;InbreedingCoeff=0.9689;MQ=68.23;MQ0=0;MQRankSum=-6.345;QD=59.85;ReadPosRankSum=3.490;VQSLOD=3.3276;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:75.19:0,75,1609	0/0:12,0:12:27.08:0,27,625	0/0:13,0:13:17.57:0,18,370	0/0:14,0:14:33.07:0,33,724	0/0:24,0:24:57.18:0,57,1315	0/0:19,0:19:42.09:0,42,814	0/0:30,0:30:69.20:0,69,1573	0/0:23,0:23:42.14:0,42,952	0/0:19,0:19:33.11:0,33,804	0/0:24,0:24:57.16:0,57,1203	0/0:6,0:6:15.04:0,15,340	1/1:6,19:28:42.14:1771,42,0	0/0:13,0:13:33.07:0,33,598	0/0:27,0:27:69.19:0,69,1635	0/0:22,0:22:54.18:0,54,1360	0/0:24,0:24:60.19:0,60,1358	0/0:31,0:31:78.23:0,78,1888	0/0:23,0:23:54.16:0,54,1193	0/0:22,0:22:53.19:0,53,1058	0/0:18,0:18:39.12:0,39,932	0/0:44,0:44:99:0,99,2223	0/0:13,0:13:27.09:0,27,702	0/0:17,0:17:36.12:0,36,831	0/0:46,0:46:99:0,105,2514	0/0:11,0:11:21.05:0,21,527	0/0:32,0:32:60.20:0,60,1434	0/0:16,0:16:45.15:0,45,1146	0/0:12,0:12:33.09:0,33,810
chr10	107967167	.	T	TG	478.71	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.947;DP=461;FS=2.309;HRun=4;HaplotypeScore=49.1801;InbreedingCoeff=0.7026;MQ=91.92;MQ0=0;MQRankSum=-2.324;QD=31.91;ReadPosRankSum=1.019;VQSLOD=4.0437;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1280	0/0:2,0:2:6.02:0,6,68	0/0:27,0:27:69.15:0,69,759	0/0:13,0:12:30.09:0,30,339	0/0:9,0:9:21.06:0,21,237	0/0:12,0:12:36.10:0,36,408	0/0:22,0:22:60.17:0,60,681	0/0:24,0:24:54.13:0,54,597	0/0:12,0:12:36.07:0,36,388	0/0:7,0:7:18.05:0,18,199	0/0:3,0:3:6.02:0,6,68	1/1:0,15:15:42.14:573,42,0	0/0:17,0:17:48.14:0,48,544	0/0:7,0:7:21.06:0,21,236	0/0:11,0:11:30.09:0,30,340	0/0:13,0:13:36.10:0,36,408	0/0:39,0:39:99:0,111,1246	0/0:36,0:36:99:0,108,1208	0/0:20,0:20:54.15:0,54,613	0/0:3,0:3:6.02:0,6,68	0/0:41,0:41:87.48:0,87,1201	0/0:7,0:7:21.06:0,21,238	0/0:8,0:8:18.05:0,18,204	0/0:31,0:31:84.24:0,84,952	0/0:10,0:10:24.07:0,24,272	0/0:17,0:17:48.13:0,48,540	0/0:9,0:9:18.05:0,18,204	0/0:8,0:8:9.02:0,9,102
chr10	107967507	.	GA	G	4203.05	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.855;DP=546;FS=9.798;HRun=2;HaplotypeScore=56.9670;InbreedingCoeff=0.9577;MQ=74.11;MQ0=1;MQRankSum=-0.718;QD=36.55;ReadPosRankSum=-1.852;VQSLOD=2.8731;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.26:0,84,1237	0/0:4,0:4:9.03:0,9,135	0/0:7,0:7:12.51:0,13,164	0/0:15,0:14:6.96:0,7,385	0/0:12,0:12:30.09:0,30,431	0/0:15,0:15:45.15:0,45,672	0/0:21,0:21:63.21:0,63,942	1/1:0,26:26:75.24:973,75,0	0/0:18,0:18:54.18:0,54,809	0/0:19,0:19:51.17:0,51,751	0/0:11,0:11:24.08:0,24,359	0/0:17,0:17:51.14:0,51,740	0/0:14,0:14:42.14:0,42,627	0/0:18,0:18:54.18:0,54,809	0/0:22,0:22:66.22:0,66,989	0/0:24,0:24:72.24:0,72,1079	0/0:50,0:50:99:0,147,2203	0/0:32,0:32:96.30:0,96,1417	1/1:0,22:22:66.21:855,66,0	1/1:0,6:6:18.06:233,18,0	1/1:2,47:49:99:1675,129,0	0/0:17,0:17:48.15:0,48,699	0/0:10,0:10:27.09:0,27,391	0/0:31,0:31:93.30:0,93,1372	0/0:13,0:13:36.12:0,36,539	0/0:23,0:23:69.23:0,69,1025	1/1:0,12:12:36.12:467,36,0	0/0:9,0:9:27.09:0,27,404
chr10	107968731	.	TTTG	T	2438.92	PASS	AB=0.964;AC=45;AF=0.833;AN=54;BaseQRankSum=-4.056;DP=307;FS=11.054;HRun=0;HaplotypeScore=55.2391;InbreedingCoeff=0.1949;MQ=67.18;MQ0=16;MQRankSum=-2.060;QD=9.27;ReadPosRankSum=-2.510;VQSLOD=0.9969;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:36.71:307,37,0	1/1:3,0:3:5.92:40,6,0	0/0:30,0:9:6.67:0,7,42	0/1:15,0:6:6.34:24,0,6	1/1:14,0:14:18.11:223,18,0	0/1:7,2:9:3:153,0,3	1/1:13,0:12:13.97:89,14,0	1/1:23,0:22:10.08:165,10,0	1/1:7,0:7:11.91:92,12,0	1/1:12,0:12:6.60:164,7,0	1/1:9,1:10:26.34:223,26,0	1/1:8,0:8:0.66:20,1,0	1/1:6,0:5:3.94:12,4,0	1/1:5,0:5:4.82:32,5,0	1/1:11,0:11:11.93:90,12,0	0/1:10,0:10:0.01:0,0,0	1/1:12,0:12:11.04:68,11,0	0/1:10,0:8:5.16:77,0,5	0/1:15,0:15:12.37:160,0,12	1/1:5,0:5:14.27:113,14,0	./.	1/1:4,0:4:2.97:21,3,0	1/1:5,0:4:4.26:13,4,0	1/1:10,0:10:3.01:38,3,0	1/1:9,0:9:6.53:66,7,0	1/1:9,0:8:17.36:147,17,0	0/0:10,0:9:2.84:0,3,14	1/1:14,0:13:29.07:226,29,0
chr10	107968732	.	TTG	T	3215.90	PASS	AB=1.000;AC=47;AF=0.870;AN=54;BaseQRankSum=-3.371;DP=299;FS=1.268;HRun=0;HaplotypeScore=47.4984;InbreedingCoeff=0.3867;MQ=64.52;MQ0=16;MQRankSum=-2.723;QD=12.97;ReadPosRankSum=-0.747;VQSLOD=3.2107;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,1:23:56.96:448,57,0	1/1:3,0:3:5.92:40,6,0	0/0:28,0:7:6.56:0,7,43	0/1:15,0:6:7.59:22,0,8	1/1:13,1:14:30.16:250,30,0	1/1:8,1:9:15.90:156,16,0	1/1:13,0:12:19.08:134,19,0	1/1:22,1:22:28.86:258,29,0	1/1:5,1:6:16.38:121,16,0	1/1:12,0:12:29.94:241,30,0	1/1:10,0:10:26.97:235,27,0	1/1:7,0:7:10.92:58,11,0	1/1:6,0:5:6.83:29,7,0	1/1:4,0:4:3.89:29,4,0	1/1:11,0:11:12.87:92,13,0	0/0:9,0:9:0:0,0,0	1/1:12,0:12:18.77:123,19,0	1/1:10,0:8:11.54:107,12,0	1/1:15,0:15:17.32:217,17,0	1/1:4,1:5:14.04:124,14,0	./.	1/1:4,0:4:3.91:21,4,0	1/1:5,0:4:5.92:39,6,0	1/1:1,9:10:3.01:42,3,0	1/1:9,0:9:11.45:79,11,0	1/1:4,4:7:17.74:155,18,0	0/0:10,0:9:0.47:0,0,2	1/1:12,2:13:32.60:297,33,0
chr10	107968733	.	TG	T	3775.71	PASS	AB=0.717;AC=50;AF=0.893;AN=56;BaseQRankSum=-3.518;DP=288;FS=1.731;HRun=1;HaplotypeScore=41.6833;InbreedingCoeff=0.3759;MQ=63.45;MQ0=17;MQRankSum=-2.107;QD=14.81;ReadPosRankSum=-0.126;VQSLOD=2.9530;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,1:23:58.20:450,58,0	1/1:2,0:2:5.92:40,6,0	0/0:27,1:7:6.52:0,7,44	0/1:13,1:5:2.29:23,0,2	1/1:12,1:13:35.51:254,36,0	1/1:8,0:8:23.36:201,23,0	1/1:11,0:10:20.86:154,21,0	1/1:22,1:22:43.99:353,44,0	1/1:6,0:6:17.96:157,18,0	1/1:10,2:12:35.42:296,35,0	1/1:9,0:9:26.96:230,27,0	1/1:7,0:7:11.53:75,12,0	1/1:6,0:5:8.82:57,9,0	1/1:2,0:2:3.47:28,3,0	1/1:10,0:10:15.04:97,15,0	0/1:0,9:9:0:0,0,0	1/1:12,0:12:20.87:163,21,0	1/1:9,0:7:6.77:107,7,0	1/1:1,13:14:36.85:302,37,0	1/1:5,0:5:14.01:105,14,0	0/0:5,0:4:0:0,0,0	1/1:4,0:4:3.91:22,4,0	1/1:1,4:4:6.02:77,6,0	1/1:9,0:9:3.01:31,3,0	1/1:9,0:9:11.96:97,12,0	1/1:7,1:7:17.80:160,18,0	1/1:2,9:9:2.74:15,3,0	1/1:12,2:13:32.88:281,33,0
chr10	107968793	.	GA	G	2861.70	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=-1.308;DP=200;FS=0.000;HRun=1;HaplotypeScore=55.2438;InbreedingCoeff=0.2370;MQ=46.31;MQ0=1;MQRankSum=-1.423;QD=15.14;ReadPosRankSum=2.323;VQSLOD=3.3301;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,11:14:31.56:196,32,0	1/1:1,2:3:5.77:34,6,0	./.	0/0:9,0:6:1.62:0,2,85	1/1:0,8:6:14.86:106,15,0	1/1:3,8:10:26.02:161,26,0	1/1:0,11:11:11.88:83,12,0	1/1:0,8:8:23.85:178,24,0	1/1:2,7:8:20.69:159,21,0	1/1:2,5:7:13.06:109,13,0	1/1:0,5:3:8.77:54,9,0	1/1:0,8:8:8.93:65,9,0	1/1:1,2:3:8.36:48,8,0	1/1:1,8:9:26.83:205,27,0	1/1:0,13:13:38.76:300,39,0	1/1:1,13:14:18.03:204,18,0	1/1:0,2:2:5.92:40,6,0	1/1:0,7:6:11.95:92,12,0	1/1:2,8:10:16.43:159,16,0	1/1:0,5:5:14.89:109,15,0	1/1:0,4:3:5.91:37,6,0	1/1:0,1:1:2.98:21,3,0	1/1:1,3:2:2.97:20,3,0	1/1:2,6:8:14.09:105,14,0	1/1:0,1:1:2.98:21,3,0	1/1:0,11:11:26.05:180,26,0	1/1:1,10:11:29.76:220,30,0	1/1:0,2:2:5.99:49,6,0
chr10	107968796	.	GA	G	2943.23	PASS	AB=1.000;AC=53;AF=0.981;AN=54;BaseQRankSum=0.956;DP=213;FS=1.540;HRun=1;HaplotypeScore=55.6427;InbreedingCoeff=0.0064;MQ=46.68;MQ0=3;MQRankSum=-1.533;QD=13.95;ReadPosRankSum=2.600;VQSLOD=3.0093;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,11:16:28.36:203,28,0	1/1:1,2:3:5.77:34,6,0	./.	0/1:8,0:6:9.25:9,0,60	1/1:0,8:6:14.81:98,15,0	1/1:4,8:11:26.36:167,26,0	1/1:2,11:13:13.24:86,13,0	1/1:1,8:8:23.81:170,24,0	1/1:2,7:8:19.68:145,20,0	1/1:2,5:7:7.61:102,8,0	1/1:0,5:3:8.73:53,9,0	1/1:1,8:9:11.90:85,12,0	1/1:1,2:3:7.99:45,8,0	1/1:1,8:9:26.83:204,27,0	1/1:1,13:14:41.72:318,42,0	1/1:2,13:15:23.40:229,23,0	1/1:1,2:3:8.89:59,9,0	1/1:0,7:6:11.95:91,12,0	1/1:3,8:11:25.93:171,26,0	1/1:0,5:5:14.75:95,15,0	1/1:0,4:3:5.90:37,6,0	1/1:0,1:1:2.98:21,3,0	1/1:1,3:2:2.97:20,3,0	1/1:2,6:8:14.87:106,15,0	1/1:1,1:2:5.98:47,6,0	1/1:0,11:11:25.07:176,25,0	1/1:1,10:11:29.69:215,30,0	1/1:1,2:2:5.99:49,6,0
chr10	107968962	.	GT	G	349.67	PASS	AB=0.917;AC=5;AF=0.089;AN=56;BaseQRankSum=4.856;DP=509;FS=1.923;HRun=8;HaplotypeScore=53.8533;InbreedingCoeff=0.7789;MQ=78.30;MQ0=0;MQRankSum=-0.853;QD=10.60;ReadPosRankSum=0.342;VQSLOD=1.8266;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.23:0,93,1095	1/1:0,6:6:18.03:174,18,0	0/1:10,1:11:13.31:13,0,155	0/0:17,0:17:34.77:0,35,390	0/0:24,0:24:66.17:0,66,767	0/0:19,0:18:48.11:0,48,564	0/0:13,0:13:33.10:0,33,399	0/0:20,0:20:45.12:0,45,525	0/0:7,0:7:21.06:0,21,254	0/0:18,0:18:51.14:0,51,599	0/0:17,0:17:45.14:0,45,543	1/1:0,16:16:30.05:289,30,0	0/0:19,0:19:51.14:0,51,604	0/0:15,0:15:42.13:0,42,505	0/0:17,0:17:45.14:0,45,542	0/0:29,0:29:69.20:0,69,822	0/0:24,0:24:72.21:0,72,858	0/0:24,0:24:66.19:0,66,785	0/0:19,0:19:42.12:0,42,498	0/0:26,0:26:75.17:0,75,873	0/0:17,0:17:42.13:0,42,507	0/0:6,0:6:18.06:0,18,217	0/0:8,0:8:24.07:0,24,280	0/0:29,0:29:84.23:0,84,991	0/0:16,0:16:38.10:0,38,518	0/0:23,0:23:54.06:0,54,632	0/0:25,0:25:66.19:0,66,784	0/0:11,0:11:30.04:0,30,334
chr10	107970400	.	T	TAC	1894.95	PASS	AB=0.713;AC=9;AF=0.167;AN=54;BaseQRankSum=-4.630;DP=750;FS=12.843;HRun=0;HaplotypeScore=103.1474;InbreedingCoeff=0.2479;MQ=58.42;MQ0=7;MQRankSum=-2.359;QD=9.87;ReadPosRankSum=-2.893;VQSLOD=1.8391;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:41:78.44:0,78,859	./.	0/0:30,0:11:12.03:0,12,135	0/0:28,0:12:10.88:0,11,135	0/0:23,0:25:39.11:0,39,451	0/0:20,0:20:3.42:0,3,450	0/0:38,0:39:75.82:0,76,828	0/1:20,15:34:19.36:519,0,19	0/0:20,0:19:39.07:0,39,420	0/0:23,0:23:48.27:0,48,515	0/0:14,0:14:21.06:0,21,246	1/1:31,0:30:18.96:127,19,0	0/0:28,0:28:22.06:0,22,714	0/1:13,1:14:23.10:23,0,220	0/0:30,0:31:65.67:0,66,703	0/0:28,0:28:78.22:0,78,903	0/0:37,0:38:83.80:0,84,926	0/0:24,0:24:53.71:0,54,591	1/1:14,8:19:4.05:319,4,0	0/1:7,8:15:17.10:217,0,17	0/1:23,31:53:80.76:663,0,81	0/0:29,0:29:68.01:0,68,777	0/0:16,0:16:35.30:0,35,382	0/0:45,0:48:48.70:0,49,952	0/0:16,0:19:35.93:0,36,390	0/0:33,1:35:12.57:0,13,610	0/1:9,11:20:21.01:170,0,21	0/0:18,0:18:27.55:0,28,290
chr10	107972467	.	CA	C	44.99	PASS	AB=0.667;AC=1;AF=0.018;AN=56;BaseQRankSum=3.741;DP=298;FS=0.000;HRun=1;HaplotypeScore=41.1749;InbreedingCoeff=-0.0252;MQ=97.65;MQ0=0;MQRankSum=-1.893;QD=5.62;ReadPosRankSum=1.482;VQSLOD=0.4416;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.06:0,57,859	0/1:4,4:8:99:119,0,167	0/0:26,0:21:37.19:0,37,528	0/0:25,0:18:25.81:0,26,273	0/0:10,0:10:30.10:0,30,476	0/0:7,0:7:18.05:0,18,264	0/0:7,0:7:18.06:0,18,287	0/0:16,0:16:45.14:0,45,677	0/0:9,0:9:27.09:0,27,430	0/0:12,0:12:36.12:0,36,567	0/0:5,0:5:15.03:0,15,214	0/0:11,0:11:33.10:0,33,494	0/0:6,0:6:18.06:0,18,287	0/0:3,0:3:9.01:0,9,120	0/0:8,0:8:24.08:0,24,383	0/0:10,0:10:30.10:0,30,479	0/0:13,0:13:39.13:0,39,622	0/0:5,0:5:15.05:0,15,239	0/0:21,0:21:63.20:0,63,964	0/0:8,0:8:23.99:0,24,307	0/0:5,0:5:15.03:0,15,209	0/0:7,0:7:21.07:0,21,335	0/0:12,0:12:33.11:0,33,525	0/0:7,0:7:18.06:0,18,287	0/0:9,0:9:27.09:0,27,430	0/0:17,0:17:51.15:0,51,771	0/0:4,0:4:12.04:0,12,189	0/0:5,0:5:15.05:0,15,239
chr10	107974027	.	C	CT	266.40	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.788;DP=621;FS=8.330;HRun=1;HaplotypeScore=66.0331;InbreedingCoeff=0.9676;MQ=74.19;MQ0=0;MQRankSum=-1.913;QD=24.22;ReadPosRankSum=0.287;VQSLOD=2.8134;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,126,1589	1/1:0,11:11:24.08:360,24,0	0/0:16,0:16:48.11:0,48,558	0/0:22,0:22:53.83:0,54,664	0/0:28,0:28:81.20:0,81,1003	0/0:29,0:29:87.28:0,87,1129	0/0:18,0:18:48.16:0,48,623	0/0:26,0:26:75.21:0,75,926	0/0:20,0:20:57.19:0,57,740	0/0:16,0:16:45.04:0,45,561	0/0:12,0:12:30.10:0,30,389	0/0:34,0:34:90.28:0,90,1153	0/0:19,0:19:57.17:0,57,725	0/0:17,0:17:51.12:0,51,618	0/0:24,0:24:72.20:0,72,895	0/0:23,0:23:69.22:0,69,895	0/0:38,0:37:99:0,114,1463	0/0:22,0:22:63.20:0,63,817	0/0:22,0:22:60.15:0,60,758	0/0:18,0:18:48.16:0,48,623	0/0:36,0:36:99:0,105,1334	0/0:13,0:13:36.10:0,36,454	0/0:5,0:5:12.04:0,12,156	0/0:25,0:25:72.23:0,72,935	0/0:19,0:19:51.14:0,51,634	0/0:17,0:17:51.15:0,51,639	0/0:22,0:22:66.18:0,66,827	0/0:23,0:23:69.22:0,69,896
chr10	107974502	.	C	CAA	2967.76	PASS	AB=0.750;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.124;DP=493;FS=0.000;HRun=12;HaplotypeScore=65.8532;InbreedingCoeff=0.8823;MQ=52.95;MQ0=19;MQRankSum=-0.204;QD=22.15;ReadPosRankSum=-5.376;VQSLOD=1.5888;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,1:42:56.32:0,56,766	1/1:1,1:8:17.86:94,18,0	0/0:5,0:4:8.72:0,9,66	0/1:2,0:3:4.37:31,0,4	0/0:17,0:19:23.79:0,24,260	0/0:19,0:20:32.73:0,33,399	0/0:19,0:20:16.05:0,16,344	1/1:5,18:24:53.66:714,54,0	0/0:12,0:11:27.02:0,27,250	0/0:11,0:12:20.91:0,21,186	0/0:15,0:16:38.72:0,39,336	1/1:5,10:15:23.51:280,24,0	0/0:20,0:20:30.90:0,31,392	0/0:15,0:16:20.76:0,21,233	0/0:25,0:25:44.80:0,45,408	0/0:20,0:20:38.58:0,39,385	0/0:28,0:29:46.05:0,46,580	0/0:15,0:15:29.89:0,30,324	1/1:6,16:21:48.13:646,48,0	1/1:2,5:10:20.04:214,20,0	1/1:4,10:15:32.59:416,33,0	0/0:8,1:8:17.99:0,18,166	0/0:5,0:4:8.99:0,9,83	0/0:21,0:20:41.45:0,41,388	0/0:17,0:16:23.82:0,24,222	0/0:19,0:17:29.83:0,30,320	1/1:9,22:33:61.54:770,62,0	0/0:7,0:6:4.27:0,4,53
chr10	107976512	.	CT	C	1643.58	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.467;DP=470;FS=2.176;HRun=11;HaplotypeScore=55.6207;InbreedingCoeff=0.9445;MQ=68.24;MQ0=4;MQRankSum=-0.194;QD=16.44;ReadPosRankSum=-1.442;VQSLOD=3.8856;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:51.09:0,51,530	0/0:3,0:3:6.02:0,6,64	0/0:22,0:13:21.67:0,22,200	0/0:13,0:12:17.05:0,17,149	0/0:15,0:16:41.87:0,42,405	0/0:14,0:14:36.07:0,36,375	0/0:33,0:32:75.19:0,75,799	1/1:6,17:22:44.14:409,44,0	0/0:14,0:14:27.06:0,27,282	0/0:8,0:8:15.03:0,15,154	0/0:11,0:11:33.08:0,33,351	0/0:5,0:12:23.23:0,23,116	0/0:12,0:11:18.05:0,18,191	0/0:20,0:20:35.52:0,36,402	0/0:11,0:11:24.06:0,24,256	0/0:10,0:10:24.06:0,24,256	0/0:34,2:35:35.21:0,35,753	0/0:31,3:35:16.16:0,16,768	1/1:4,20:25:61.96:498,62,0	1/1:2,11:13:29.95:246,30,0	1/1:3,11:14:35.95:295,36,0	0/0:3,0:3:9.02:0,9,96	0/0:5,0:5:15.04:0,15,160	0/0:24,1:25:29.46:0,29,511	0/0:10,0:10:29.66:0,30,298	0/0:14,1:15:18.71:0,19,394	1/1:5,20:24:44.89:369,45,0	0/0:10,0:9:27.07:0,27,288
chr10	107976727	.	GC	G	833.38	PASS	AB=0.921;AC=20;AF=0.357;AN=56;BaseQRankSum=2.570;DP=255;FS=0.646;HRun=11;HaplotypeScore=31.8539;InbreedingCoeff=0.4528;MQ=76.78;MQ0=8;MQRankSum=-1.251;QD=6.31;ReadPosRankSum=1.734;VQSLOD=0.2137;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,1:13:6.63:7,0,130	1/1:2,0:3:7.06:34,7,0	0/1:27,1:11:1.60:2,0,110	0/0:22,0:10:20.90:0,21,179	0/1:10,0:10:0.14:0,0,123	0/0:12,2:14:2.29:0,2,202	0/0:17,1:17:14.40:0,14,339	0/1:4,1:4:15.62:16,0,55	0/0:8,0:7:18.03:0,18,179	0/1:7,1:8:12.62:13,0,83	0/0:11,0:11:15.04:0,15,160	1/1:0,9:9:14.98:123,15,0	0/0:2,0:2:3:0,3,25	0/0:5,0:5:12.02:0,12,119	0/0:2,0:2:6:0,6,57	0/0:4,0:8:11.68:0,12,85	0/0:11,0:11:14.94:0,15,138	0/1:9,1:9:3.59:4,0,171	1/1:2,8:10:10.98:152,11,0	1/1:1,8:9:26.64:198,27,0	1/1:2,3:5:5.99:50,6,0	0/0:6,0:6:5.87:0,6,39	0/0:6,0:6:9.02:0,9,96	0/0:3,0:2:3.01:0,3,32	0/0:3,0:3:9.02:0,9,96	1/1:3,5:8:17.96:144,18,0	1/1:2,10:12:32.96:271,33,0	0/0:3,0:3:9.02:0,9,96
chr10	107976792	.	CG	C	81.86	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.421;DP=305;FS=1.784;HRun=1;HaplotypeScore=34.5654;InbreedingCoeff=0.8788;MQ=85.34;MQ0=1;MQRankSum=0.303;QD=20.46;ReadPosRankSum=-0.016;VQSLOD=3.6057;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.13:0,39,620	1/1:0,4:4:12.04:168,12,0	0/0:10,0:9:24.05:0,24,331	0/0:15,0:15:30.20:0,30,503	0/0:14,0:14:39.12:0,39,598	0/0:18,0:18:48.15:0,48,739	0/0:13,0:13:38.64:0,39,466	0/0:27,0:27:78.20:0,78,1168	0/0:6,0:6:18.01:0,18,257	0/0:9,0:9:27.09:0,27,411	0/0:8,0:8:24.08:0,24,383	0/0:13,0:13:29.97:0,30,467	0/0:9,0:9:27.07:0,27,405	0/0:6,0:6:12.04:0,12,184	0/0:9,0:9:27.08:0,27,408	0/0:8,0:8:24.08:0,24,382	0/0:20,0:20:57.06:0,57,822	0/0:19,0:18:51.04:0,51,780	0/0:12,0:12:36.12:0,36,569	0/0:9,0:9:27.09:0,27,429	0/0:7,0:7:18.06:0,18,278	0/0:7,0:7:21.07:0,21,331	0/0:5,0:5:14.88:0,15,205	0/0:9,0:9:26.98:0,27,385	0/0:5,0:5:14.94:0,15,183	0/0:11,0:11:33.11:0,33,526	0/0:10,0:10:30.09:0,30,452	0/0:9,0:9:24.07:0,24,359
chr10	107980493	.	C	CCTCTCTCTCT	3607.25	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=4.796;DP=441;FS=0.596;HRun=0;HaplotypeScore=144.7752;InbreedingCoeff=0.7560;MQ=66.96;MQ0=9;MQRankSum=-7.171;QD=20.85;ReadPosRankSum=-3.501;VQSLOD=1.8617;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:33.26:0,33,902	1/1:13,0:13:6.07:126,6,0	0/1:23,0:13:27.68:28,0,28	0/1:46,0:21:21.58:22,0,167	0/0:15,0:15:45.15:0,45,1217	0/0:16,0:16:36.06:0,36,991	0/0:19,0:18:39.13:0,39,986	1/1:23,0:23:27.08:575,27,0	0/0:8,0:8:18.05:0,18,443	0/0:15,0:15:33.11:0,33,866	0/0:11,0:11:21.07:0,21,607	1/1:17,0:17:26.99:521,27,0	0/0:7,0:7:12.04:0,12,311	0/0:4,0:4:6.02:0,6,182	0/0:11,0:11:30.10:0,30,840	0/0:17,0:17:36.11:0,36,996	0/0:29,0:29:54.18:0,54,1557	0/0:15,0:15:24.08:0,24,727	1/1:13,1:14:24.08:754,24,0	1/1:9,0:9:15.04:491,15,0	1/1:7,6:12:6.02:144,6,0	0/0:12,0:12:33.10:0,33,923	0/0:12,0:12:30.10:0,30,859	0/0:16,0:16:28.34:0,28,775	0/0:19,0:19:36.12:0,36,992	0/0:17,0:17:33.82:0,34,874	1/1:15,0:15:27.09:947,27,0	0/0:6,0:6:12.04:0,12,365
chr10	107980518	.	CTTT	C	1249.26	PASS	AB=0.800;AC=10;AF=0.179;AN=56;BaseQRankSum=8.499;DP=407;FS=4.946;HRun=4;HaplotypeScore=84.3088;InbreedingCoeff=0.2271;MQ=56.88;MQ0=15;MQRankSum=-7.861;QD=11.36;ReadPosRankSum=-0.659;VQSLOD=-0.3742;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:45.46:0,45,869	1/1:12,0:12:5.88:107,6,0	0/0:12,0:5:11.04:0,11,95	0/0:32,0:9:19.25:0,19,192	0/0:24,0:24:72.23:0,72,1446	0/0:18,0:18:39.07:0,39,659	0/1:19,1:19:6.21:6,0,649	0/1:20,4:23:99:251,0,420	0/0:7,0:8:15.93:0,16,265	0/0:17,0:16:45.13:0,45,920	0/0:10,0:10:30.10:0,30,628	1/1:5,9:16:13.50:390,13,0	0/0:8,0:8:23.95:0,24,436	0/0:4,0:3:9.03:0,9,209	0/0:13,0:13:39.12:0,39,717	0/0:14,0:14:42.14:0,42,940	0/0:24,0:23:63.85:0,64,1285	0/0:13,0:13:32.04:0,32,625	0/1:8,2:10:92.41:207,0,92	0/1:3,2:6:53.43:86,0,53	0/1:5,0:6:13.09:30,0,13	0/0:14,0:14:42.13:0,42,909	0/0:13,0:13:36.12:0,36,719	0/0:14,0:13:32.55:0,33,660	0/0:17,0:17:48.16:0,48,1046	0/0:19,0:19:25.52:0,26,1068	0/1:9,4:14:93.35:319,0,93	0/0:5,0:4:12.04:0,12,274
chr10	107980519	.	T	TCTCTC	1745.84	PASS	AB=0.886;AC=9;AF=0.161;AN=56;BaseQRankSum=8.407;DP=400;FS=3.996;HRun=0;HaplotypeScore=95.9519;InbreedingCoeff=0.2192;MQ=57.06;MQ0=14;MQRankSum=-6.964;QD=20.30;ReadPosRankSum=-0.314;VQSLOD=3.2871;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:45.98:0,46,952	1/1:10,0:12:20.48:174,20,0	0/0:12,0:5:1.63:0,2,80	0/0:29,0:8:19.01:0,19,233	0/0:25,0:25:72.24:0,72,1543	0/0:17,0:17:36.12:0,36,765	0/0:20,0:19:13.16:0,13,739	0/1:23,0:21:99:290,0,583	0/0:8,0:8:17.88:0,18,293	0/0:16,0:15:45.15:0,45,966	0/0:10,0:10:30.10:0,30,690	1/1:15,0:15:1.91:220,2,0	0/0:8,0:8:23.95:0,24,456	0/0:4,0:3:9.03:0,9,207	0/0:14,0:14:39.12:0,39,792	0/0:14,0:14:42.14:0,42,965	0/0:24,0:23:61.05:0,61,1320	0/0:13,0:13:26.83:0,27,612	0/1:6,3:9:99:417,0,115	0/1:5,1:6:52.79:231,0,53	0/1:7,0:6:17.29:47,0,17	0/0:14,0:14:42.14:0,42,947	0/0:13,0:13:36.12:0,36,805	0/0:13,0:12:30.10:0,30,655	0/0:17,0:17:48.16:0,48,1100	0/0:17,0:18:26.56:0,27,1148	0/1:11,1:14:99:509,0,101	0/0:6,0:5:12.04:0,12,279
chr10	107980521	.	T	TTC	346.32	PASS	AB=0.903;AC=16;AF=0.308;AN=52;BaseQRankSum=4.724;DP=404;FS=12.169;HRun=0;HaplotypeScore=83.4847;InbreedingCoeff=0.4268;MQ=56.67;MQ0=16;MQRankSum=-3.727;QD=2.53;ReadPosRankSum=-0.008;VQSLOD=0.9710;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:20.32:0,20,259	0/0:11,0:11:0.13:0,0,39	./.	./.	0/0:25,0:25:37.13:0,37,468	0/1:9,8:17:18.87:164,0,19	1/1:12,6:17:6.02:88,6,0	1/1:26,0:24:8.19:50,8,0	1/1:5,2:7:6.02:90,6,0	0/0:16,0:15:31.88:0,32,325	0/0:10,0:10:3.17:0,3,155	0/1:16,0:15:7.87:8,0,8	0/0:9,0:9:12.03:0,12,136	0/0:4,0:3:6.02:0,6,68	0/0:12,0:13:4.63:0,5,189	0/0:14,0:14:30.08:0,30,332	0/0:24,0:23:32.88:0,33,352	0/1:13,0:14:9.97:10,0,120	1/1:11,0:11:8.91:45,9,0	1/1:7,0:7:5.27:21,5,0	1/1:7,0:6:2.52:18,3,0	0/0:14,0:14:29.97:0,30,304	0/0:11,0:13:7.03:0,7,128	0/0:14,0:13:18.85:0,19,194	0/0:16,0:17:26.22:0,26,303	0/0:18,0:18:35.39:0,35,351	0/1:11,0:14:10.84:11,0,19	0/0:7,0:6:12.01:0,12,117
chr10	107980522	.	TC	T	314.79	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=10.108;DP=401;FS=4.996;HRun=1;HaplotypeScore=73.6292;InbreedingCoeff=0.4576;MQ=56.60;MQ0=16;MQRankSum=-8.282;QD=4.84;ReadPosRankSum=-1.324;VQSLOD=-0.0902;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:37.27:0,37,532	1/1:5,4:11:26.63:208,27,0	0/0:9,0:3:5.13:0,5,56	0/0:29,0:7:15.74:0,16,111	0/0:24,0:24:63.03:0,63,888	0/0:17,0:17:35.93:0,36,381	0/0:18,0:17:21.28:0,21,321	0/0:25,0:23:2.92:0,3,283	0/0:7,0:7:14.98:0,15,148	0/0:16,0:15:44.63:0,45,636	0/0:10,0:10:27.97:0,28,384	1/1:15,0:14:23.15:135,23,0	0/0:9,0:9:18.06:0,18,255	0/0:4,0:3:9.03:0,9,140	0/0:12,0:12:32.92:0,33,433	0/0:15,0:15:42.09:0,42,571	0/0:24,0:23:57.12:0,57,784	0/0:14,0:14:18.18:0,18,394	0/1:11,0:11:20.94:21,0,92	0/1:7,0:7:18.97:19,0,21	1/1:7,0:6:1.55:4,2,0	0/0:14,0:14:42.14:0,42,615	0/0:12,0:12:29.91:0,30,380	0/0:15,0:14:29.61:0,30,398	0/0:17,0:17:48.15:0,48,669	0/0:20,0:19:29.17:0,29,663	0/1:14,0:14:34.26:71,0,34	0/0:7,0:6:15.03:0,15,197
chr10	107980524	.	TC	T	369.95	PASS	AB=0.895;AC=7;AF=0.125;AN=56;BaseQRankSum=7.390;DP=397;FS=8.251;HRun=1;HaplotypeScore=72.2735;InbreedingCoeff=0.2598;MQ=54.96;MQ0=20;MQRankSum=-6.204;QD=6.27;ReadPosRankSum=-0.746;VQSLOD=-0.1942;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:16:40.42:0,40,556	1/1:11,0:11:26.72:211,27,0	0/1:10,0:3:12.93:13,0,49	0/0:25,0:6:12.14:0,12,122	0/0:25,0:24:68.04:0,68,990	0/0:17,0:17:36.05:0,36,426	0/0:17,0:16:32.88:0,33,366	0/0:26,0:24:51.12:0,51,443	0/0:7,0:7:15.02:0,15,156	0/0:17,0:15:45.04:0,45,669	0/0:10,0:10:29.31:0,29,409	0/0:15,0:14:5.55:0,6,87	0/0:10,0:9:21.05:0,21,291	0/0:4,0:3:9.03:0,9,144	0/0:12,0:12:34.93:0,35,488	0/0:15,0:15:39.12:0,39,580	0/0:22,1:22:54.64:0,55,796	0/0:14,0:14:39.02:0,39,514	0/1:8,3:11:68.30:68,0,103	0/1:6,1:7:20.10:42,0,20	0/1:7,0:6:0.03:0,0,0	0/0:14,0:14:42.14:0,42,651	0/0:11,0:11:28.91:0,29,387	0/0:14,0:13:26.69:0,27,399	0/0:17,0:17:48.16:0,48,706	0/0:20,0:19:34.18:0,34,739	0/1:10,3:13:52.95:164,0,53	0/0:7,0:6:15.05:0,15,230
chr10	107982184	.	TG	T	4836.63	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.671;DP=686;FS=1.896;HRun=7;HaplotypeScore=78.6909;InbreedingCoeff=0.9899;MQ=78.56;MQ0=0;MQRankSum=-0.376;QD=27.80;ReadPosRankSum=-0.215;VQSLOD=5.3083;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,129,1584	1/1:1,6:7:18.04:183,18,0	0/0:12,0:12:29.91:0,30,336	0/0:24,0:24:54.12:0,54,645	0/0:16,0:16:39.11:0,39,478	0/0:31,0:31:81.26:0,81,1016	0/0:29,0:29:84.21:0,84,1024	1/1:4,29:33:87.15:866,87,0	0/0:24,0:24:69.21:0,69,852	0/0:21,0:21:51.16:0,51,642	0/0:5,0:5:15.05:0,15,189	1/1:1,19:20:60.14:612,60,0	0/0:31,0:31:84.26:0,84,1045	0/0:21,0:21:60.17:0,60,716	0/0:26,0:26:72.23:0,72,906	0/0:26,0:26:78.25:0,78,981	0/0:41,0:41:99:0,105,1321	0/0:38,0:38:99:0,99,1227	1/1:1,13:14:39.09:398,39,0	1/1:1,10:11:33.07:336,33,0	1/1:5,53:58:99:1646,162,0	0/0:20,0:20:48.14:0,48,591	0/0:14,0:14:36.11:0,36,441	0/0:33,0:33:96.30:0,96,1195	0/0:19,0:19:51.15:0,51,629	0/0:30,0:30:81.22:0,81,971	1/1:1,30:31:78.18:796,78,0	0/0:4,0:4:12.04:0,12,151
chr10	107985407	.	C	CTT	1472.18	PASS	AB=0.789;AC=11;AF=0.196;AN=56;BaseQRankSum=-1.203;DP=596;FS=6.907;HRun=16;HaplotypeScore=76.9133;InbreedingCoeff=0.7796;MQ=72.36;MQ0=4;MQRankSum=-1.850;QD=11.59;ReadPosRankSum=-0.728;VQSLOD=2.3191;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:31:36.65:0,37,369	0/0:3,0:6:10.89:0,11,46	0/0:59,0:20:11.83:0,12,95	0/0:49,0:24:8.51:0,9,72	0/0:25,0:29:18.68:0,19,185	0/0:15,0:15:17.25:0,17,157	0/0:7,0:10:17.37:0,17,149	1/1:11,16:30:27.82:448,28,0	0/0:9,0:11:18.81:0,19,143	0/0:21,0:24:28.28:0,28,199	0/0:19,0:19:9.88:0,10,87	0/0:13,0:16:11.41:0,11,123	0/0:11,0:13:25.60:0,26,158	0/0:15,0:17:23.48:0,23,178	0/0:17,0:17:26.50:0,26,197	0/0:21,0:22:33.76:0,34,273	0/0:32,0:36:54.67:0,55,449	0/0:18,0:18:29.31:0,29,223	1/1:19,5:29:35.03:434,35,0	1/1:7,14:24:27.98:410,28,0	1/1:5,7:13:9.03:102,9,0	0/0:5,0:5:5.85:0,6,45	0/1:10,4:15:50.35:50,0,90	0/0:12,0:12:6.47:0,6,168	0/0:18,0:20:22.50:0,23,143	0/0:24,0:26:34.64:0,35,257	1/1:6,9:16:19.79:200,20,0	0/0:10,0:11:14.40:0,14,145
chr10	107985597	.	T	TA	205.69	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.978;DP=614;FS=1.183;HRun=7;HaplotypeScore=95.0751;InbreedingCoeff=0.9605;MQ=67.31;MQ0=5;MQRankSum=-2.258;QD=20.57;ReadPosRankSum=-0.894;VQSLOD=2.6259;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:95.91:0,96,919	1/1:2,8:10:27.01:300,27,0	0/0:33,0:26:67.38:0,67,603	0/0:42,0:22:39.64:0,40,369	0/0:22,0:22:54.05:0,54,508	0/0:15,0:16:41.08:0,41,375	0/0:23,0:23:66.01:0,66,613	0/0:41,0:41:85.34:0,85,814	0/0:14,0:14:39.06:0,39,377	0/0:22,0:22:57.08:0,57,550	0/0:15,0:15:42.07:0,42,406	0/0:25,0:24:47.54:0,48,454	0/0:17,0:17:48.04:0,48,448	0/0:24,0:24:60.07:0,60,573	0/0:31,0:31:90.13:0,90,863	0/0:21,0:21:57.09:0,57,550	0/0:47,0:47:99:0,126,1197	0/0:19,0:19:51.03:0,51,479	0/0:13,0:13:36.06:0,36,353	0/0:17,0:17:40.97:0,41,377	0/0:6,0:6:12.02:0,12,115	0/0:13,0:13:33.04:0,33,313	0/0:8,0:8:20.93:0,21,189	0/0:30,0:30:69.09:0,69,660	0/0:8,0:8:21.03:0,21,203	0/0:32,0:32:90.12:0,90,863	0/0:15,0:15:32.68:0,33,307	0/0:12,0:12:36.06:0,36,348
chr10	107985608	.	T	TTCTCTC	2674.99	PASS	AB=0.980;AC=14;AF=0.250;AN=56;BaseQRankSum=3.407;DP=681;FS=1.578;HRun=0;HaplotypeScore=172.4937;InbreedingCoeff=0.7842;MQ=63.05;MQ0=6;MQRankSum=-5.455;QD=14.46;ReadPosRankSum=-5.422;VQSLOD=1.5584;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:89.19:0,89,1454	0/1:9,0:9:10.66:11,0,42	0/0:40,0:26:23.67:0,24,388	0/0:49,0:24:12.21:0,12,210	0/0:19,0:20:42.01:0,42,730	0/0:17,0:17:33.11:0,33,701	0/0:25,0:25:60.14:0,60,1108	1/1:45,0:42:80.94:1112,81,0	0/0:16,0:16:31.30:0,31,519	0/0:21,0:21:49.49:0,49,825	0/0:16,0:16:42.06:0,42,626	1/1:38,0:35:14.85:164,15,0	0/0:19,0:19:54.12:0,54,963	0/0:25,0:25:57.16:0,57,1114	0/0:30,0:31:84.23:0,84,1581	0/0:24,0:24:60.14:0,60,1013	0/0:46,0:46:99:0,111,1958	0/1:22,0:24:20.97:21,0,803	1/1:15,2:18:34.87:671,35,0	1/1:15,4:20:17.67:179,18,0	1/1:10,0:10:5.95:70,6,0	0/0:13,0:13:38.95:0,39,711	0/0:10,0:10:21.07:0,21,400	0/0:30,0:30:66.19:0,66,1232	0/0:11,0:11:32.87:0,33,542	0/0:34,0:34:81.25:0,81,1588	1/1:18,3:19:40.69:634,41,0	0/0:13,0:13:26.94:0,27,294
chr10	107985620	.	CTG	C	101.72	PASS	AB=0.905;AC=4;AF=0.071;AN=56;BaseQRankSum=2.329;DP=727;FS=1.924;HRun=0;HaplotypeScore=126.2266;InbreedingCoeff=-0.0720;MQ=59.34;MQ0=7;MQRankSum=0.492;QD=0.92;ReadPosRankSum=-2.211;VQSLOD=2.2779;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,110,1837	0/1:13,0:12:6.02:6,0,197	0/0:38,0:21:44.32:0,44,627	0/0:47,0:19:28.99:0,29,383	0/0:20,0:20:34.04:0,34,690	0/0:18,0:18:36.11:0,36,659	0/0:30,0:30:87.10:0,87,1357	0/1:38,1:35:37.72:38,0,657	0/0:20,0:20:40.62:0,41,686	0/0:26,0:26:76:0,76,1206	0/0:20,0:20:59.48:0,59,896	0/1:18,22:37:99:151,0,152	0/0:23,0:23:69.16:0,69,1150	0/0:24,0:24:69.21:0,69,1245	0/0:36,0:36:87.86:0,88,1650	0/0:27,0:27:81.17:0,81,1351	0/0:43,0:43:99:0,123,2129	0/0:24,0:25:27.79:0,28,1048	0/0:19,0:18:22.82:0,23,385	0/1:18,0:18:4.62:5,0,111	0/0:14,0:13:5.92:0,6,58	0/0:17,0:17:48.12:0,48,818	0/0:9,0:9:24.08:0,24,461	0/0:33,0:33:90.23:0,90,1548	0/0:14,0:14:28.77:0,29,571	0/0:35,0:35:99:0,99,1770	0/0:27,0:25:49.76:0,50,509	0/0:10,0:10:29.80:0,30,455
chr10	107985634	.	G	GTCTC	1830.14	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=4.887;DP=735;FS=0.000;HRun=0;HaplotypeScore=149.0279;InbreedingCoeff=0.7124;MQ=55.05;MQ0=8;MQRankSum=-2.511;QD=8.67;ReadPosRankSum=-4.811;VQSLOD=1.3003;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:41:73.35:0,73,1106	1/1:13,0:12:12.85:97,13,0	0/0:31,0:10:6:0,6,72	0/1:36,0:13:6.92:7,0,29	0/0:19,0:19:21.58:0,22,611	0/0:13,0:18:20.84:0,21,414	0/0:28,0:31:66.91:0,67,1129	1/1:35,0:28:27:382,27,0	0/0:16,0:17:9.73:0,10,611	0/0:26,0:26:55.07:0,55,873	0/0:23,0:23:35.40:0,35,648	0/1:42,0:40:91.27:91,0,127	0/0:26,0:26:65.75:0,66,947	0/0:26,0:26:63.21:0,63,1024	0/0:34,0:38:78.96:0,79,1331	0/0:26,0:28:37.15:0,37,840	0/0:43,0:43:86.16:0,86,1460	0/0:28,0:29:52.79:0,53,928	1/1:9,10:18:35.84:701,36,0	1/1:5,9:19:2.43:12,2,0	1/1:2,9:13:2.66:12,3,0	0/0:18,0:19:48.15:0,48,741	0/0:15,0:15:31:0,31,552	0/0:29,0:31:69.19:0,69,1086	0/0:16,0:17:45.14:0,45,713	0/0:38,0:38:47.12:0,47,1179	1/1:7,20:29:32.28:702,32,0	0/0:8,0:8:15.05:0,15,246
chr10	107986426	.	AGTTT	A	1879.61	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=15.493;DP=606;FS=10.122;HRun=0;HaplotypeScore=124.0150;InbreedingCoeff=0.3335;MQ=88.17;MQ0=0;MQRankSum=-14.222;QD=13.05;ReadPosRankSum=0.289;VQSLOD=2.5155;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,3067	1/1:1,9:10:30.10:400,30,0	0/0:29,0:29:81.27:0,81,2139	0/0:23,0:23:66.20:0,66,1703	0/0:19,0:19:57.20:0,57,1562	0/0:29,0:29:87.28:0,87,2361	0/0:32,0:32:96.33:0,96,2596	0/1:27,0:27:99:333,0,149	0/0:20,0:20:60.21:0,60,1643	0/0:23,0:23:69.24:0,69,1931	0/0:16,0:16:48.16:0,48,1343	0/1:33,0:33:46.17:486,0,46	0/0:13,0:13:39.13:0,39,1047	0/0:26,0:26:75.26:0,75,2098	0/0:15,0:15:45.15:0,45,1224	0/0:26,0:26:78.27:0,78,2183	0/0:25,0:25:75.26:0,75,1989	0/0:24,0:22:72.25:0,72,1976	0/1:15,0:15:99:137,0,156	0/1:18,0:18:84.42:237,0,84	0/1:24,0:24:99:153,0,158	0/0:21,0:21:63.22:0,63,1752	0/0:11,0:11:33.11:0,33,923	0/0:26,0:26:78.27:0,78,2181	0/0:15,0:15:45.15:0,45,1248	0/0:28,0:28:84.27:0,84,2256	1/1:17,0:17:38.78:286,39,0	0/0:4,0:4:12.04:0,12,336
chr10	107986427	.	GTTTGAA	G	7195.30	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.911;DP=612;FS=9.617;HRun=0;HaplotypeScore=133.2873;InbreedingCoeff=0.9941;MQ=88.63;MQ0=0;MQRankSum=-13.788;QD=49.97;ReadPosRankSum=-1.711;VQSLOD=4.3220;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,3815	1/1:10,0:10:30.10:695,30,0	0/0:29,0:29:81.28:0,81,2524	0/0:25,0:25:66.22:0,66,2026	0/0:19,0:19:57.18:0,57,1796	0/0:29,0:29:84.27:0,84,2863	0/0:33,0:33:93.29:0,93,3129	1/1:5,22:27:66.20:1434,66,0	0/0:20,0:20:57.20:0,57,2018	0/0:23,0:23:69.24:0,69,2380	0/0:16,0:16:48.16:0,48,1646	1/1:3,29:33:80.79:1858,81,0	0/0:16,0:16:45.15:0,45,1472	0/0:26,0:26:78.27:0,78,2743	0/0:15,0:15:42.14:0,42,1429	0/0:26,0:26:78.27:0,78,2720	0/0:25,0:25:72.25:0,72,2425	0/0:24,0:22:69.24:0,69,2442	1/1:4,11:15:33.09:660,33,0	1/1:3,15:18:44.90:952,45,0	1/1:3,21:24:32.85:676,33,0	0/0:21,0:21:63.22:0,63,2158	0/0:11,0:11:33.11:0,33,1166	0/0:26,0:26:78.27:0,78,2679	0/0:15,0:15:45.14:0,45,1505	0/0:28,0:28:78.27:0,78,2762	1/1:0,17:17:39.13:921,39,0	0/0:4,0:4:12.04:0,12,425
chr10	107986432	.	AAT	A	1069.34	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=15.598;DP=593;FS=13.312;HRun=0;HaplotypeScore=100.4657;InbreedingCoeff=0.8485;MQ=88.78;MQ0=0;MQRankSum=-14.165;QD=8.49;ReadPosRankSum=0.414;VQSLOD=2.3301;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,2298	1/1:1,9:10:29.92:278,30,0	0/0:32,0:31:86.21:0,86,1531	0/0:22,0:22:63.19:0,63,1142	0/0:20,0:20:60.16:0,60,1084	0/0:27,0:27:81.26:0,81,1596	0/0:32,0:32:96.33:0,96,1920	1/1:22,0:22:45.73:220,46,0	0/0:20,0:20:60.21:0,60,1218	0/0:25,0:25:75.24:0,75,1463	0/0:17,0:17:51.15:0,51,942	1/1:30,0:30:52.60:308,53,0	0/0:17,0:17:51.17:0,51,1014	0/0:26,0:26:78.27:0,78,1569	0/0:13,0:13:39.13:0,39,784	0/0:28,0:28:84.27:0,84,1666	0/0:24,0:24:72.25:0,72,1440	0/0:23,0:21:69.24:0,69,1401	1/1:11,0:11:21.64:100,22,0	1/1:15,0:15:12.24:138,12,0	0/1:21,0:21:25.89:81,0,26	0/0:21,0:21:63.22:0,63,1259	0/0:11,0:11:33.11:0,33,662	0/0:25,0:25:75.24:0,75,1486	0/0:14,0:14:42.14:0,42,843	0/0:28,0:28:84.29:0,84,1706	1/1:17,0:17:2.48:126,2,0	0/0:4,0:4:12.04:0,12,244
chr10	107986814	.	TC	T	551.94	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.937;DP=679;FS=1.902;HRun=5;HaplotypeScore=67.4558;InbreedingCoeff=0.9862;MQ=86.92;MQ0=0;MQRankSum=-3.067;QD=23.00;ReadPosRankSum=1.472;VQSLOD=2.7270;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,114,1524	0/0:7,0:7:18.05:0,18,231	0/0:28,0:28:71.94:0,72,841	0/0:18,0:18:26.32:0,26,514	0/0:15,0:15:45.15:0,45,616	0/0:21,0:21:63.20:0,63,845	0/0:27,0:27:75.25:0,75,1026	0/0:23,0:23:60.19:0,60,808	0/0:24,0:24:72.23:0,72,968	0/0:22,0:22:63.21:0,63,861	0/0:10,0:10:30.10:0,30,410	1/1:2,22:24:57.16:647,57,0	0/0:30,0:30:90.30:0,90,1231	0/0:25,0:25:75.25:0,75,1026	0/0:21,0:21:63.18:0,63,830	0/0:40,0:40:99:0,117,1585	0/0:33,0:33:93.29:0,93,1254	0/0:30,0:30:78.26:0,78,1066	0/0:18,0:18:45.13:0,45,592	0/0:12,0:12:36.12:0,36,487	0/0:69,0:69:99:0,200,2642	0/0:22,0:22:63.17:0,63,815	0/0:16,0:16:45.14:0,45,599	0/0:23,0:23:69.17:0,69,891	0/0:18,0:18:48.16:0,48,655	0/0:27,0:27:78.24:0,78,1050	0/0:27,0:27:78.26:0,78,1067	0/0:7,0:7:21.03:0,21,266
chr10	107988023	.	T	TC	1815.48	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=3.802;DP=506;FS=2.202;HRun=2;HaplotypeScore=68.6924;InbreedingCoeff=0.9075;MQ=68.00;MQ0=21;MQRankSum=-4.347;QD=17.13;ReadPosRankSum=-2.680;VQSLOD=3.0440;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:33.73:0,34,409	1/1:5,0:5:12.01:118,12,0	0/0:68,0:22:55.29:0,55,504	0/0:57,0:15:3.05:0,3,139	0/0:15,0:15:35.99:0,36,367	0/0:20,0:19:45.06:0,45,480	0/0:23,0:23:45.11:0,45,429	1/1:14,0:15:36.65:342,37,0	0/0:11,0:11:23.99:0,24,241	0/0:19,0:19:51.11:0,51,558	0/0:15,0:15:24.51:0,25,258	1/1:17,1:18:43.72:387,44,0	0/0:9,0:9:21.05:0,21,246	0/0:18,0:18:15.84:0,16,451	0/0:10,0:10:23.84:0,24,240	0/0:10,0:10:24.03:0,24,252	0/0:24,0:22:46.14:0,46,620	0/0:8,0:8:18.04:0,18,208	1/1:16,6:23:51.29:552,51,0	1/1:9,2:12:27.90:254,28,0	1/1:15,0:16:2.66:39,3,0	0/0:10,0:10:24.05:0,24,273	0/0:8,0:8:11.06:0,11,181	0/0:11,0:8:11.95:0,12,96	0/0:12,0:12:33.06:0,33,376	0/0:24,0:24:59.64:0,60,639	1/1:15,2:17:33.55:313,34,0	0/0:5,0:5:14.84:0,15,145
chr10	107988025	.	C	CCTT	3136.34	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=3.691;DP=579;FS=22.479;HRun=0;HaplotypeScore=114.1841;InbreedingCoeff=0.9281;MQ=62.99;MQ0=32;MQRankSum=-4.463;QD=24.31;ReadPosRankSum=-5.687;VQSLOD=0.9791;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:19:38.69:0,39,606	1/1:4,0:5:15.02:203,15,0	0/0:74,0:22:54.97:0,55,600	0/0:63,0:15:2.56:0,3,165	0/0:20,0:18:36.33:0,36,471	0/0:18,0:17:45.04:0,45,633	0/0:28,0:28:49.17:0,49,556	1/1:22,1:21:39.70:584,40,0	0/0:12,0:11:21.15:0,21,304	0/0:22,0:22:50.61:0,51,748	0/0:16,0:15:26.39:0,26,369	1/1:20,1:22:51.81:613,52,0	0/0:11,0:10:23.65:0,24,356	0/0:22,0:22:42.43:0,42,630	0/0:10,0:11:24.02:0,24,321	0/0:9,0:9:24.02:0,24,341	0/0:26,0:23:61.98:0,62,899	0/0:9,0:10:20.81:0,21,314	1/1:28,1:28:72.64:905,73,0	1/1:14,2:17:36.59:409,37,0	1/1:3,10:14:5.95:84,6,0	0/0:11,0:11:24.06:0,24,367	0/0:9,0:10:10.82:0,11,261	0/0:11,0:8:14.77:0,15,115	0/0:18,0:17:32.85:0,33,511	0/0:25,0:25:66.02:0,66,879	1/1:16,2:18:44.68:530,45,0	0/0:4,0:5:14.88:0,15,200
chr10	107988070	.	TTTTTTTCCCCC	T	1259.92	PASS	AB=0.922;AC=5;AF=0.093;AN=54;BaseQRankSum=6.202;DP=695;FS=8.030;HRun=0;HaplotypeScore=128.7922;InbreedingCoeff=0.2674;MQ=39.24;MQ0=151;MQRankSum=-4.798;QD=15.55;ReadPosRankSum=0.617;VQSLOD=2.0339;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:31:72.10:0,72,2167	./.	0/0:102,0:15:41:0,41,952	0/0:83,0:8:16.30:0,16,410	0/0:27,0:20:46.47:0,46,1171	0/0:19,0:17:35.88:0,36,917	0/0:28,0:20:55.02:0,55,1371	0/1:25,0:19:99:435,0,167	0/0:18,0:13:19.24:0,19,571	0/0:21,0:19:56.10:0,56,1316	0/0:19,0:14:38.99:0,39,903	1/1:13,0:10:4.36:99,4,0	0/0:16,0:10:15.05:0,15,461	0/0:11,0:8:12.51:0,13,320	0/0:11,0:9:15:0,15,410	0/0:21,0:18:38.32:0,38,1162	0/0:36,0:29:66.05:0,66,1987	0/0:23,0:15:33.09:0,33,1084	0/1:16,7:20:99:400,0,121	0/0:14,1:11:13.35:0,13,71	0/0:10,0:6:0.47:0,0,1	0/0:10,0:8:15:0,15,330	0/0:14,0:8:20.96:0,21,583	0/0:23,0:14:29.73:0,30,1056	0/0:17,0:16:39.13:0,39,1062	0/0:23,0:19:54.79:0,55,1449	0/1:20,0:15:39.96:439,0,40	0/0:29,0:10:20.96:0,21,492
chr10	107988073	.	TTTTCCCCC	T	1308.69	PASS	AB=1.000;AC=6;AF=0.115;AN=52;BaseQRankSum=6.836;DP=664;FS=6.675;HRun=0;HaplotypeScore=103.1824;InbreedingCoeff=0.5270;MQ=40.82;MQ0=141;MQRankSum=-5.020;QD=18.70;ReadPosRankSum=2.203;VQSLOD=2.2765;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:32:65.45:0,65,1750	./.	0/0:96,0:15:36.46:0,36,655	0/0:73,0:8:15.44:0,15,254	0/0:28,0:21:43.96:0,44,1062	0/0:19,0:17:26.25:0,26,640	0/0:28,0:20:49.88:0,50,1031	0/1:19,0:14:77.71:447,0,78	0/0:17,0:13:21:0,21,465	0/0:21,0:19:53.61:0,54,1035	0/0:17,0:14:33.11:0,33,822	1/1:13,0:10:5.22:80,5,0	0/0:16,0:10:17.97:0,18,412	0/0:11,0:8:15.05:0,15,404	0/0:13,0:11:21.07:0,21,553	0/0:19,0:16:33.58:0,34,1003	0/0:38,0:31:69.24:0,69,1932	0/0:24,0:16:35.88:0,36,832	0/1:19,0:15:38.06:439,0,38	0/0:7,7:11:3.02:0,3,7	./.	0/0:10,0:8:18.06:0,18,441	0/0:14,0:8:24.08:0,24,659	0/0:22,0:14:29.64:0,30,830	0/0:16,0:15:41.92:0,42,859	0/0:24,0:19:51.73:0,52,1101	1/1:19,0:15:21.81:468,22,0	0/0:28,0:9:17.95:0,18,373
chr10	107988076	.	TCCCCC	T	1257.61	PASS	AB=0.652;AC=7;AF=0.140;AN=50;BaseQRankSum=6.803;DP=605;FS=6.695;HRun=7;HaplotypeScore=72.4601;InbreedingCoeff=0.7629;MQ=42.07;MQ0=135;MQRankSum=-6.166;QD=22.46;ReadPosRankSum=2.715;VQSLOD=-0.1993;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:27:57.19:0,57,1535	./.	0/0:89,0:13:29.82:0,30,442	0/0:61,0:7:9.01:0,9,144	0/0:27,0:21:47.90:0,48,1192	0/0:13,0:11:18.06:0,18,505	0/0:23,0:15:41.81:0,42,931	0/1:7,8:11:44.34:430,0,44	0/0:17,0:13:24.01:0,24,514	0/0:16,0:14:39.13:0,39,997	0/0:17,0:14:36.04:0,36,860	1/1:7,0:8:5.87:62,6,0	0/0:15,0:9:15.05:0,15,389	0/0:11,0:8:18.06:0,18,472	0/0:15,0:13:27.09:0,27,700	0/0:22,0:19:42.14:0,42,1106	0/0:35,0:28:69.24:0,69,1795	0/0:22,0:16:33.09:0,33,739	1/1:14,0:10:24.08:451,24,0	./.	./.	0/0:9,0:7:18.06:0,18,457	0/0:17,0:12:36.11:0,36,961	0/0:21,0:13:26.92:0,27,703	0/0:15,0:14:33.07:0,33,789	0/0:20,0:15:42.14:0,42,1064	1/1:8,8:12:24.55:452,25,0	0/0:27,0:8:17.95:0,18,346
chr10	107991786	.	A	ACTCTCTCTCT	3570.32	PASS	AB=0.990;AC=11;AF=0.196;AN=56;BaseQRankSum=4.588;DP=749;FS=1.650;HRun=0;HaplotypeScore=239.4295;InbreedingCoeff=0.6109;MQ=52.88;MQ0=29;MQRankSum=-5.221;QD=16.16;ReadPosRankSum=-4.293;VQSLOD=1.4836;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:39.55:0,40,1041	0/0:3,0:5:0:0,0,0	0/0:38,0:24:42.14:0,42,1111	0/0:43,0:15:27.06:0,27,653	0/0:18,0:16:39.12:0,39,1165	0/0:22,0:22:47.17:0,47,1402	0/0:42,0:40:99:0,102,2759	0/1:48,0:43:99:1045,0,972	0/1:22,0:21:5.24:5,0,1104	0/0:28,0:26:69.16:0,69,1984	0/0:10,0:10:24.08:0,24,701	1/1:11,16:29:6.29:169,6,0	0/0:26,0:26:75.21:0,75,2132	0/0:19,0:19:41.96:0,42,1138	0/0:23,0:22:60.19:0,60,1807	0/0:34,0:34:62.80:0,63,2298	0/0:26,0:25:51.86:0,52,1973	0/0:22,0:22:49.03:0,49,1562	1/1:28,0:22:29.27:918,29,0	1/1:15,0:15:12.56:360,13,0	0/1:61,0:59:95.25:542,0,95	0/0:19,0:18:45.15:0,45,1329	0/0:10,0:10:20.77:0,21,618	0/0:44,0:43:96.80:0,97,2916	0/0:19,0:18:39.13:0,39,1156	0/0:39,0:37:88.33:0,88,2545	1/1:13,0:13:7.13:530,7,0	0/0:10,0:10:24.08:0,24,753
chr10	107991792	.	TCACA	T	412.80	PASS	AB=0.934;AC=12;AF=0.250;AN=48;BaseQRankSum=4.008;DP=743;FS=3.093;HRun=0;HaplotypeScore=162.1338;InbreedingCoeff=0.2914;MQ=49.67;MQ0=31;MQRankSum=-0.599;QD=1.52;ReadPosRankSum=1.072;VQSLOD=2.8985;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:5.99:0,6,69	0/0:7,0:6:5.98:0,6,97	./.	./.	0/0:18,0:16:18.06:0,18,358	0/0:21,0:21:24.08:0,24,513	0/1:39,0:37:15.60:16,0,535	./.	0/0:24,0:24:40.97:0,41,660	0/1:28,0:26:21.93:22,0,324	0/1:10,0:10:13.06:13,0,103	0/0:40,0:37:17.55:0,18,303	0/0:25,1:27:4.13:0,4,675	0/0:21,0:21:31.79:0,32,420	0/0:25,0:24:27.09:0,27,622	0/1:28,2:32:2.14:2,0,651	0/0:30,0:29:37.31:0,37,917	0/0:21,0:22:28.01:0,28,408	1/1:23,0:19:9.01:84,9,0	1/1:12,0:15:3.47:29,3,0	0/1:60,0:58:0:1,0,0	0/0:18,0:17:5.47:0,5,378	0/0:8,2:10:0:0,0,0	0/1:31,16:46:29.13:299,0,29	0/0:15,0:17:17.80:0,18,321	0/0:39,0:37:39.76:0,40,700	1/1:10,0:13:9.48:84,9,0	./.
chr10	107993690	.	G	GA	5353.25	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-12.853;DP=739;FS=2.609;HRun=1;HaplotypeScore=70.5572;InbreedingCoeff=0.9999;MQ=90.70;MQ0=0;MQRankSum=-2.823;QD=39.36;ReadPosRankSum=-1.510;VQSLOD=4.9127;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,166,2126	0/0:13,0:13:33.11:0,33,423	0/0:30,0:30:78.18:0,78,992	0/0:30,0:30:81.19:0,81,985	0/0:27,0:27:78.25:0,78,1011	0/0:21,0:21:63.19:0,63,804	0/0:25,0:25:69.22:0,69,896	1/1:3,30:33:87.27:1253,87,0	0/0:21,0:21:63.19:0,63,802	0/0:29,0:29:87.27:0,87,1114	0/0:18,0:18:54.17:0,54,688	0/0:32,0:32:93.30:0,93,1206	0/0:23,0:23:66.20:0,66,843	0/0:25,0:25:75.23:0,75,960	0/0:23,0:23:66.19:0,66,841	0/0:25,0:25:75.24:0,75,973	0/0:34,0:34:99:0,99,1281	0/0:29,0:29:84.27:0,84,1087	1/1:3,23:26:78.26:1157,78,0	1/1:2,17:19:45.12:650,45,0	1/1:0,33:33:93.32:1394,93,0	0/0:26,0:26:72.22:0,72,921	0/0:16,0:16:48.12:0,48,593	0/0:29,0:28:84.27:0,84,1091	0/0:21,0:20:57.19:0,57,740	0/0:32,0:32:90.29:0,90,1169	1/1:4,21:25:60.20:899,60,0	0/0:18,0:18:54.18:0,54,699
chr10	107999526	.	C	CGT	637.09	PASS	AB=0.936;AC=24;AF=0.462;AN=52;BaseQRankSum=0.998;DP=587;FS=10.761;HRun=0;HaplotypeScore=90.7821;InbreedingCoeff=0.0189;MQ=68.55;MQ0=6;MQRankSum=-0.144;QD=1.84;ReadPosRankSum=-2.556;VQSLOD=-0.2256;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,9:42:26.04:38,0,26	1/1:9,0:9:5.84:71,6,0	./.	./.	0/1:11,4:15:23.03:79,0,23	1/1:8,7:15:3.01:44,3,0	0/1:28,1:30:8.37:18,0,8	0/0:20,0:20:1.72:0,2,15	0/0:11,0:13:5.71:0,6,29	0/0:20,0:20:0.44:0,0,1	0/1:9,0:9:11.93:12,0,84	0/1:21,0:21:5.35:5,0,31	0/1:19,0:19:54.82:55,0,78	0/1:24,0:23:16.65:38,0,17	0/0:25,0:28:9.30:0,9,68	0/0:20,0:20:5.89:0,6,62	0/0:35,0:35:15.04:0,15,158	0/0:19,0:23:8.85:0,9,78	1/1:16,0:16:7.35:60,7,0	1/1:11,0:11:2.87:29,3,0	0/1:45,0:44:8.10:23,0,8	1/1:19,0:19:8.03:107,8,0	1/1:11,0:10:6:66,6,0	0/1:23,7:30:32.20:32,0,72	0/0:13,0:14:11.86:0,12,110	0/0:19,0:18:2.11:0,2,26	1/1:17,0:17:9.01:86,9,0	0/1:11,0:11:25.47:29,0,25
chr10	108000727	.	G	GAGCCA	7020.45	PASS	AB=0.634;AC=9;AF=0.161;AN=56;BaseQRankSum=-8.515;DP=637;FS=0.922;HRun=0;HaplotypeScore=100.8601;InbreedingCoeff=0.8438;MQ=54.91;MQ0=19;MQRankSum=-3.761;QD=62.13;ReadPosRankSum=-1.897;VQSLOD=5.0228;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.22:0,78,1525	0/0:15,0:15:42.14:0,42,871	0/0:24,0:4:12.04:0,12,240	0/0:32,0:5:15.05:0,15,311	0/0:15,0:15:39.12:0,39,770	0/0:28,0:28:81.28:0,81,1679	0/0:30,0:30:72.20:0,72,1412	0/1:11,13:22:66.56:1128,0,67	0/0:18,0:18:54.19:0,54,1091	0/0:22,0:21:57.08:0,57,1047	0/0:21,0:21:57.18:0,57,1127	0/0:19,0:19:54.19:0,54,1105	0/0:21,0:21:57.20:0,57,1182	0/0:18,0:18:48.16:0,48,995	0/0:19,0:19:54.18:0,54,1100	0/0:26,0:26:72.22:0,72,1403	0/0:43,0:43:99:0,120,2392	0/0:38,0:38:99:0,102,2057	1/1:6,8:13:33.07:767,33,0	1/1:5,15:20:54.10:1412,54,0	1/1:5,22:28:56.77:1752,57,0	0/0:25,0:25:72.25:0,72,1472	0/0:16,0:16:45.15:0,45,919	0/0:32,0:32:90.31:0,90,1864	0/0:14,0:14:42.13:0,42,832	0/0:17,0:17:51.16:0,51,1011	1/1:4,19:24:66.23:1962,66,0	0/0:3,0:3:9.03:0,9,187
chr10	108007637	.	TCCCCCCCA	T	282.98	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.330;DP=215;FS=6.616;HRun=0;HaplotypeScore=58.5592;InbreedingCoeff=0.4492;MQ=92.22;MQ0=1;MQRankSum=-3.980;QD=23.58;ReadPosRankSum=1.910;VQSLOD=1.8903;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:21.07:0,21,646	1/1:3,9:12:15.05:371,15,0	0/0:8,0:8:12.04:0,12,375	0/0:20,0:19:18.06:0,18,603	0/0:8,0:8:21.07:0,21,796	0/0:15,0:15:30.09:0,30,976	0/0:11,0:11:5.43:0,5,296	0/0:10,0:10:12.04:0,12,370	0/0:5,0:5:6.02:0,6,246	0/0:2,0:2:6.02:0,6,191	0/0:7,0:7:12.04:0,12,476	0/0:2,0:7:6.02:0,6,165	0/0:3,0:3:6.02:0,6,191	0/0:5,0:5:12.04:0,12,303	0/0:8,0:8:21.07:0,21,748	0/0:8,0:8:21.07:0,21,775	0/0:5,0:5:12.04:0,12,452	0/0:6,0:6:18.06:0,18,642	0/0:3,0:3:6.02:0,6,252	0/0:5,0:5:12.04:0,12,318	0/0:9,0:9:18.06:0,18,619	0/0:4,0:4:12.04:0,12,400	0/0:7,0:7:18.06:0,18,634	0/0:6,0:6:9.03:0,9,313	0/0:6,0:6:12.04:0,12,492	0/0:9,0:9:18.06:0,18,636	0/0:6,0:6:12.04:0,12,501	0/0:8,0:8:15.05:0,15,468
chr10	108008179	.	T	TACACACACACAC	3880.56	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=1.492;DP=696;FS=28.408;HRun=0;HaplotypeScore=242.5896;InbreedingCoeff=0.7919;MQ=68.32;MQ0=6;MQRankSum=-8.539;QD=22.05;ReadPosRankSum=-5.245;VQSLOD=0.8322;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:75.21:0,75,2288	1/1:6,0:7:6.02:294,6,0	0/0:28,0:22:15.01:0,15,420	0/1:31,0:24:15.48:15,0,597	0/0:21,0:22:33.11:0,33,1121	0/0:18,0:18:6.12:0,6,890	0/0:25,0:25:42.09:0,42,1129	1/1:40,0:38:52.98:1735,53,0	0/0:30,0:30:66.20:0,66,2081	0/0:26,0:26:42.13:0,42,1373	0/0:16,0:16:42.14:0,42,1333	1/1:22,0:22:12.04:333,12,0	0/0:20,0:20:33.10:0,33,1041	0/0:27,0:29:60.17:0,60,1753	0/0:32,0:35:69.24:0,69,2216	0/0:36,0:36:78.24:0,78,2364	0/0:38,0:42:83.72:0,84,2782	0/0:26,0:26:57.16:0,57,1820	1/1:12,4:15:27.09:861,27,0	1/1:10,6:17:3.01:70,3,0	1/1:15,1:15:1.25:3,1,0	0/0:15,0:15:30.09:0,30,756	0/0:18,0:20:44.65:0,45,1448	0/0:42,0:44:81.22:0,81,2498	0/0:11,0:11:24.08:0,24,782	0/0:25,0:25:50.89:0,51,1353	1/1:11,12:26:17.13:569,17,0	0/0:6,0:6:18.06:0,18,525
chr10	108011391	.	A	AGCT	1677.86	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.300;DP=741;FS=7.125;HRun=0;HaplotypeScore=109.3890;InbreedingCoeff=0.9637;MQ=91.05;MQ0=0;MQRankSum=-1.047;QD=44.15;ReadPosRankSum=1.547;VQSLOD=5.4485;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:78.25:0,78,1100	0/0:11,0:11:27.09:0,27,390	0/0:33,0:32:44.18:0,44,634	0/0:33,0:33:55.64:0,56,901	0/0:17,0:17:33.09:0,33,457	0/0:22,0:22:48.14:0,48,674	0/0:31,0:31:66.22:0,66,952	0/0:19,0:19:27.08:0,27,375	0/0:32,0:32:72.23:0,72,1020	0/0:27,0:27:39.13:0,39,559	0/0:10,0:10:12.03:0,12,156	1/1:10,28:38:87.30:1773,87,0	0/0:30,0:30:72.24:0,72,1041	0/0:38,0:38:87.28:0,87,1240	0/0:19,0:19:45.15:0,45,651	0/0:25,0:25:51.16:0,51,717	0/0:29,0:29:75.24:0,75,1064	0/0:31,0:31:78.26:0,78,1121	0/0:21,0:21:35.79:0,36,488	0/0:17,0:17:24.08:0,24,346	0/0:37,0:38:93.01:0,93,1281	0/0:17,0:17:26.21:0,26,388	0/0:16,0:16:27.06:0,27,352	0/0:44,0:44:99:0,123,1703	0/0:21,0:21:51.17:0,51,738	0/0:35,0:35:69.21:0,69,948	0/0:32,0:31:87.26:0,87,1220	0/0:14,0:14:36.12:0,36,521
chr10	108011992	.	C	CT	6393.78	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.875;DP=584;FS=17.196;HRun=1;HaplotypeScore=59.5741;InbreedingCoeff=0.9896;MQ=82.98;MQ0=0;MQRankSum=-0.116;QD=39.71;ReadPosRankSum=-0.608;VQSLOD=2.9739;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:99:0,126,1619	0/0:10,0:10:27.09:0,27,348	0/0:15,0:15:36.11:0,36,453	0/0:21,0:21:51.15:0,51,636	0/0:14,0:14:36.10:0,36,452	0/0:14,0:14:39.11:0,39,490	0/0:34,0:34:99:0,99,1255	1/1:0,17:17:51.16:741,51,0	0/0:17,0:17:48.16:0,48,621	0/0:21,0:21:60.20:0,60,779	0/0:12,0:12:30.10:0,30,389	1/1:1,29:29:72.21:1054,72,0	0/0:18,0:18:51.17:0,51,660	0/0:24,0:24:69.21:0,69,880	0/0:20,0:20:54.14:0,54,671	0/0:12,0:12:33.09:0,33,414	0/0:22,0:22:63.20:0,63,817	0/0:26,0:26:72.20:0,72,916	1/1:2,26:28:78.23:1138,78,0	1/1:0,4:4:12.04:180,12,0	1/1:2,63:65:99:2607,175,0	0/0:6,0:6:18.04:0,18,217	0/0:9,0:9:24.08:0,24,311	0/0:37,0:37:99:0,102,1308	0/0:20,0:20:60.18:0,60,765	0/0:18,0:18:54.17:0,54,686	1/1:0,17:17:45.15:674,45,0	0/0:8,0:8:18.06:0,18,233
chr10	108012091	.	ATG	A	290.06	PASS	AB=0.911;AC=14;AF=0.292;AN=48;BaseQRankSum=4.560;DP=590;FS=16.599;HRun=0;HaplotypeScore=87.0921;InbreedingCoeff=-0.2567;MQ=63.69;MQ0=14;MQRankSum=-0.217;QD=0.99;ReadPosRankSum=1.411;VQSLOD=0.2818;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:34,1:35:11.67:12,0,221	0/0:9,0:9:2.61:0,3,13	./.	./.	0/1:7,3:11:61.57:62,0,113	0/1:13,2:15:17.68:18,0,163	0/1:38,2:38:41.39:41,0,232	0/0:28,0:26:18.06:0,18,223	0/0:15,0:15:15.05:0,15,224	0/1:22,1:23:11.67:12,0,220	0/0:10,0:10:9.03:0,9,118	0/0:33,0:32:13.32:0,13,95	0/1:14,1:15:43.43:43,0,187	0/1:22,1:23:57.88:58,0,112	1/1:9,0:20:11.35:56,11,0	0/1:15,1:17:28.82:29,0,161	0/0:19,0:19:12.04:0,12,179	0/0:16,0:16:18.02:0,18,227	0/0:27,0:26:9.03:0,9,115	0/0:12,0:12:3:0,3,25	./.	0/1:15,1:16:20.71:21,0,101	0/0:12,0:12:12.04:0,12,177	0/1:34,5:39:28.47:28,0,394	0/1:17,0:18:2.12:2,0,104	0/1:17,2:19:50.43:50,0,119	0/0:15,0:13:5.99:0,6,49	./.
chr10	108012134	.	TCAGCTCTCG	T	1255.84	PASS	AB=0.756;AC=6;AF=0.107;AN=56;BaseQRankSum=3.586;DP=524;FS=7.723;HRun=0;HaplotypeScore=127.4634;InbreedingCoeff=0.1428;MQ=60.90;MQ0=26;MQRankSum=-4.850;QD=17.44;ReadPosRankSum=-1.021;VQSLOD=1.6887;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:84.29:0,84,3977	1/1:1,3:4:8.66:291,9,0	0/0:65,0:17:45.75:0,46,1281	0/0:82,0:23:48.87:0,49,1329	0/0:16,0:16:45.15:0,45,1899	0/0:17,0:18:39.08:0,39,1705	0/0:27,0:27:75.26:0,75,3296	0/1:10,4:14:99:347,0,1035	0/0:14,0:14:36.59:0,37,1457	0/0:18,0:18:6.86:0,7,1945	0/0:5,0:5:12.04:0,12,529	0/1:17,13:27:88.16:347,0,88	0/0:11,0:11:33.11:0,33,1431	0/0:11,0:11:33.11:0,33,1380	0/0:17,0:17:23.82:0,24,712	0/0:14,0:14:39.05:0,39,1499	0/0:13,0:13:30.10:0,30,1218	0/0:9,0:9:27.01:0,27,1200	0/1:8,3:12:99:174,0,654	0/0:3,2:5:3.32:0,3,139	0/0:10,6:13:5.12:0,5,83	0/0:7,0:7:18.06:0,18,722	0/0:8,0:8:21.07:0,21,840	0/0:26,0:25:66.20:0,66,2580	0/0:11,0:11:30.10:0,30,1258	0/0:20,0:20:60.20:0,60,2181	0/1:9,3:11:99:220,0,113	0/0:2,0:2:3.01:0,3,137
chr10	108012274	.	TGG	T	4786.03	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.959;DP=528;FS=8.071;HRun=3;HaplotypeScore=70.9786;InbreedingCoeff=0.9824;MQ=85.61;MQ0=0;MQRankSum=-0.946;QD=41.26;ReadPosRankSum=-1.867;VQSLOD=3.5325;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:78.22:0,78,1468	1/1:0,5:5:15.05:230,15,0	0/0:17,0:16:48.15:0,48,891	0/0:22,0:22:57.02:0,57,1033	0/0:14,0:14:42.14:0,42,811	0/0:15,0:15:42.14:0,42,811	0/0:34,0:34:96.33:0,96,1854	1/1:4,22:26:63.20:936,63,0	0/0:20,0:20:60.21:0,60,1144	0/0:18,0:18:54.19:0,54,1041	0/0:6,0:6:18.06:0,18,347	0/0:22,0:21:60.20:0,60,1124	0/0:17,0:17:51.17:0,51,976	0/0:18,0:18:54.19:0,54,1029	0/0:24,0:24:72.25:0,72,1384	0/0:18,0:18:54.19:0,54,1043	0/0:32,0:32:96.33:0,96,1826	0/0:18,0:18:54.19:0,54,1043	1/1:0,13:13:33.06:456,33,0	1/1:0,4:4:12.04:184,12,0	1/1:0,54:53:99:2385,157,0	0/0:12,0:12:36.12:0,36,695	0/0:5,0:5:15.05:0,15,290	0/0:29,0:29:87.30:0,87,1680	0/0:5,0:5:15.05:0,15,290	0/0:16,0:16:48.16:0,48,927	1/1:0,14:14:39.13:596,39,0	0/0:21,0:21:63.22:0,63,1217
chr10	108012454	.	A	ACT	5395.17	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-6.519;DP=621;FS=2.327;HRun=0;HaplotypeScore=79.0971;InbreedingCoeff=0.9920;MQ=81.82;MQ0=0;MQRankSum=-1.727;QD=48.61;ReadPosRankSum=-2.597;VQSLOD=4.6442;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.22:0,69,971	1/1:1,6:7:18.06:324,18,0	0/0:20,0:20:34.95:0,35,600	0/0:15,0:15:31.59:0,32,410	0/0:24,0:24:66.22:0,66,945	0/0:20,0:20:57.19:0,57,814	0/0:20,0:20:60.19:0,60,843	1/1:1,16:17:48.16:852,48,0	0/0:19,0:19:54.18:0,54,774	0/0:24,0:24:69.23:0,69,973	0/0:17,0:17:51.17:0,51,728	1/1:0,29:29:87.30:1594,87,0	0/0:18,0:18:54.18:0,54,771	0/0:30,0:30:90.30:0,90,1289	0/0:25,0:25:72.23:0,72,1014	0/0:27,0:27:75.22:0,75,1053	0/0:38,0:38:99:0,111,1571	0/0:22,0:22:63.18:0,63,882	1/1:3,19:23:57.16:977,57,0	1/1:0,11:11:33.11:605,33,0	0/0:44,0:44:99:0,117,1658	0/0:24,0:24:66.22:0,66,944	0/0:15,0:15:42.14:0,42,601	0/0:21,0:21:63.05:0,63,778	0/0:24,0:24:66.22:0,66,945	0/0:33,0:32:93.30:0,93,1315	1/1:0,23:23:56.66:1044,57,0	0/0:5,0:5:12.04:0,12,172
chr10	108014346	.	CCTTCTGCCCACAGAG	C	335.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.872;DP=512;FS=2.367;HRun=0;HaplotypeScore=204.1024;InbreedingCoeff=0.8774;MQ=88.40;MQ0=0;MQRankSum=-2.943;QD=83.98;ReadPosRankSum=1.453;VQSLOD=3.7113;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.20:0,57,4215	1/1:0,4:4:9.03:419,9,0	0/0:24,0:24:72.25:0,72,3927	0/0:13,0:13:39.07:0,39,2570	0/0:9,0:9:27.09:0,27,1991	0/0:10,0:10:30.10:0,30,2183	0/0:30,0:30:90.31:0,90,6374	0/0:25,0:25:72.25:0,72,4340	0/0:15,0:15:45.15:0,45,3219	0/0:13,0:13:39.13:0,39,2593	0/0:3,0:3:9.03:0,9,689	0/0:28,0:28:84.29:0,84,5715	0/0:10,0:10:30.10:0,30,2056	0/0:19,0:19:57.20:0,57,4137	0/0:16,0:16:48.16:0,48,3503	0/0:19,0:19:57.20:0,57,4056	0/0:29,0:29:87.30:0,87,6139	0/0:27,0:27:81.28:0,81,5329	0/0:17,0:17:51.17:0,51,3238	0/0:8,0:8:24.07:0,24,1278	0/0:57,0:57:99:0,172,12262	0/0:8,0:8:24.08:0,24,1799	0/0:9,0:9:27.09:0,27,1998	0/0:37,0:37:99:0,108,7916	0/0:9,0:9:27.09:0,27,1952	0/0:22,0:22:66.23:0,66,4441	0/0:16,0:16:48.16:0,48,3533	0/0:15,0:15:42.14:0,42,2814
chr10	108016146	.	G	GCCC	1426.31	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=0.520;DP=584;FS=2.250;HRun=8;HaplotypeScore=86.1412;InbreedingCoeff=0.9704;MQ=82.24;MQ0=1;MQRankSum=-4.470;QD=10.81;ReadPosRankSum=-2.724;VQSLOD=-0.7081;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:54:0,54,672	0/0:10,0:10:18.02:0,18,236	0/0:16,0:16:26.35:0,26,298	0/0:21,0:21:47.40:0,47,542	0/0:9,0:9:23.88:0,24,275	0/0:14,0:14:30.03:0,30,375	0/0:29,0:29:81.26:0,81,1062	1/1:4,4:12:15.01:189,15,0	0/0:31,0:32:78.13:0,78,987	0/0:18,0:19:43.56:0,44,551	0/0:9,0:9:27.09:0,27,354	1/1:7,1:21:15.03:207,15,0	0/0:25,0:25:60.17:0,60,788	0/0:34,0:34:90.24:0,90,1160	0/0:24,0:24:63.19:0,63,828	0/0:21,0:21:51.13:0,51,670	0/0:30,0:30:78.10:0,78,968	0/0:20,0:20:51.07:0,51,633	1/1:6,6:13:10.67:214,11,0	1/1:1,5:6:12.04:219,12,0	1/1:20,35:66:34.16:500,34,0	0/0:10,0:10:27.07:0,27,340	0/0:17,0:17:42.10:0,42,535	0/0:38,0:38:99:0,99,1284	0/0:11,0:11:24.04:0,24,299	0/0:23,0:23:54.15:0,54,709	1/1:3,9:12:15.05:278,15,0	0/0:6,0:6:18.06:0,18,237
chr10	108018017	.	A	ATATC	3432.51	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-9.654;DP=415;FS=15.749;HRun=0;HaplotypeScore=65.3458;InbreedingCoeff=0.7791;MQ=74.26;MQ0=0;MQRankSum=-1.067;QD=28.60;ReadPosRankSum=-1.057;VQSLOD=1.9209;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:69.19:0,69,1072	0/0:8,0:8:21.06:0,21,317	0/0:12,0:10:12.03:0,12,176	0/0:18,0:14:5.03:0,5,51	0/0:15,0:15:45.14:0,45,721	0/0:14,0:14:30.09:0,30,473	0/0:8,0:8:14.99:0,15,170	1/1:19,22:40:57.13:1167,57,0	0/0:8,0:8:24.07:0,24,374	0/0:11,0:11:24.08:0,24,377	0/0:22,0:22:42.04:0,42,659	0/0:4,0:14:18.02:0,18,166	0/0:12,0:12:24.08:0,24,399	0/0:14,0:14:39.10:0,39,597	0/0:10,0:10:21.07:0,21,349	0/0:12,0:12:18.06:0,18,296	0/0:23,0:23:57.13:0,57,867	0/1:14,0:14:15.82:16,0,391	1/1:7,14:21:42.12:919,42,0	1/1:4,7:11:15.05:370,15,0	1/1:4,11:15:24.08:591,24,0	0/0:4,0:4:9:0,9,100	0/0:4,0:4:2.99:0,3,24	0/0:4,0:4:6.02:0,6,100	0/0:13,0:13:24.07:0,24,374	0/0:17,0:17:39.11:0,39,602	1/1:10,8:18:15.05:369,15,0	0/0:22,0:22:48.14:0,48,772
chr10	108018178	.	ATG	A	333.03	PASS	AB=0.852;AC=7;AF=0.175;AN=40;BaseQRankSum=-2.094;DP=122;FS=4.943;HRun=0;HaplotypeScore=21.8967;InbreedingCoeff=0.4566;MQ=52.10;MQ0=2;MQRankSum=-1.896;QD=6.94;ReadPosRankSum=-0.059;VQSLOD=1.9305;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:8:17.90:0,18,139	./.	0/0:6,0:2:5.73:0,6,35	0/0:2,0:1:3:0,3,26	./.	0/0:2,0:2:5.99:0,6,48	0/0:3,0:3:5.99:0,6,49	1/1:18,0:15:8.41:270,8,0	0/0:1,0:1:2.99:0,3,24	0/0:4,0:4:10.61:0,11,69	0/0:3,0:3:8.98:0,9,72	0/0:3,0:3:5.98:0,6,46	./.	./.	./.	0/0:4,0:4:11.98:0,12,98	0/0:15,0:15:8.91:0,9,257	0/1:19,4:22:11.97:12,0,199	0/0:1,0:1:1.55:0,2,4	1/1:1,0:1:3:25,3,0	./.	0/0:3,0:3:8.21:0,8,56	./.	./.	0/0:7,0:7:17.98:0,18,150	0/0:5,0:5:15:0,15,130	1/1:6,0:6:17.96:145,18,0	0/0:6,0:3:8.97:0,9,71
chr10	108018180	.	G	GTATA	49.75	PASS	AB=0.882;AC=3;AF=0.50;AN=6;BaseQRankSum=-0.400;DP=109;FS=5.332;HRun=0;HaplotypeScore=28.5693;MQ=51.74;MQ0=2;MQRankSum=-1.200;QD=0.96;ReadPosRankSum=-1.200;VQSLOD=0.4011;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	0/1:18,0:17:11.51:18,0,12	./.	./.	./.	./.	./.	./.	./.	./.	0/1:9,4:14:38.91:71,0,39	0/1:16,0:19:25.61:30,0,26	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	108019112	.	G	GGTACGGGTCTGT	5407.41	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.042;DP=710;FS=1.350;HRun=0;HaplotypeScore=240.6629;InbreedingCoeff=0.9577;MQ=76.22;MQ0=0;MQRankSum=-8.934;QD=150.21;ReadPosRankSum=-0.451;VQSLOD=5.0844;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,4640	1/1:4,1:5:12.04:584,12,0	0/0:18,0:18:13.81:0,14,1378	0/0:17,0:17:45.08:0,45,1241	0/0:17,0:17:48.14:0,48,1709	0/0:20,0:20:48.46:0,48,2126	0/0:36,0:36:99:0,105,3757	0/0:25,0:25:63.20:0,63,1960	0/0:24,0:24:72.23:0,72,2600	0/0:33,0:33:99:0,99,3416	0/0:10,0:10:30.09:0,30,1052	1/1:16,12:31:87.30:4823,87,0	0/0:28,0:28:81.28:0,81,2898	0/0:21,0:21:63.20:0,63,2111	0/0:34,0:34:99:0,99,3625	0/0:25,0:25:66.23:0,66,2428	0/0:37,0:37:99:0,108,3842	0/0:38,0:38:99:0,111,3940	0/0:16,0:16:45.15:0,45,1455	0/0:16,0:16:48.14:0,48,1473	0/0:67,0:67:99:0,202,6740	0/0:19,0:19:57.20:0,57,2066	0/0:18,0:18:51.16:0,51,1845	0/0:27,0:27:78.25:0,78,2808	0/0:24,0:24:69.21:0,69,2292	0/0:34,0:34:99:0,99,3585	0/0:21,0:20:63.22:0,63,2330	0/0:4,0:4:12.04:0,12,408
chr10	108019512	.	G	GC	218.91	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.000;DP=780;FS=0.000;HRun=6;HaplotypeScore=76.2916;InbreedingCoeff=0.9972;MQ=80.95;MQ0=0;MQRankSum=-2.808;QD=19.90;ReadPosRankSum=0.674;VQSLOD=3.0467;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.11:0,96,945	1/1:0,11:11:26.64:313,27,0	0/0:33,0:33:86.63:0,87,852	0/0:16,0:16:36.04:0,36,357	0/0:18,0:18:51.10:0,51,513	0/0:28,0:28:78.08:0,78,776	0/0:29,0:29:75.17:0,75,763	0/0:26,0:26:69.14:0,69,695	0/0:34,0:34:93.19:0,93,941	0/0:36,0:36:99:0,102,1034	0/0:10,0:10:27.06:0,27,275	0/0:35,0:35:99:0,99,1010	0/0:27,0:27:78.18:0,78,795	0/0:33,0:33:90.19:0,90,911	0/0:36,0:36:99:0,105,1064	0/0:31,0:31:81.17:0,81,821	0/0:31,0:31:87.20:0,87,888	0/0:26,0:26:69.13:0,69,696	0/0:23,0:23:48.10:0,48,487	0/0:16,0:16:45.10:0,45,459	0/0:76,0:76:99:0,213,2141	0/0:25,0:25:72.16:0,72,735	0/0:20,0:20:54.11:0,54,544	0/0:27,0:27:75.15:0,75,758	0/0:26,0:26:72.16:0,72,735	0/0:27,0:27:75.17:0,75,765	0/0:33,0:33:99:0,99,998	0/0:12,0:12:30.07:0,30,306
chr10	108020460	.	TTTA	T	355.38	PASS	AB=0.976;AC=17;AF=0.304;AN=56;BaseQRankSum=16.728;DP=649;FS=6.996;HRun=0;HaplotypeScore=114.3851;InbreedingCoeff=-0.3990;MQ=58.04;MQ0=15;MQRankSum=-12.150;QD=0.89;ReadPosRankSum=5.270;VQSLOD=0.9670;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:18.32:0,18,1746	0/1:14,0:14:31.08:31,0,390	0/1:14,0:5:0.37:0,0,45	0/0:16,0:11:2.59:0,3,252	0/1:29,1:30:45.06:45,0,980	0/1:30,1:31:21.64:22,0,1142	0/0:17,0:17:2.94:0,3,585	0/1:61,0:52:9.63:10,0,1783	0/0:13,0:13:8.94:0,9,464	0/1:13,0:12:0.19:0,0,351	0/1:25,1:26:38.19:38,0,745	0/1:8,5:13:99:112,0,494	0/0:22,0:22:27.35:0,27,1075	0/1:14,0:14:5.93:6,0,260	0/0:10,0:10:9.08:0,9,398	0/0:12,0:12:3.12:0,3,307	0/1:46,0:46:1.82:2,0,1524	0/0:49,1:50:20.77:0,21,2104	0/0:34,0:30:53.48:0,53,1531	0/1:26,1:27:78.29:78,0,694	0/1:9,0:9:9.18:9,0,192	0/1:3,0:3:0.03:0,0,106	0/1:14,0:13:11.31:11,0,335	0/0:13,0:13:11.73:0,12,638	0/0:17,0:17:18.24:0,18,758	0/1:38,0:38:91.40:91,0,1109	0/1:29,0:29:16.88:17,0,804	0/1:18,0:17:21.45:21,0,514
chr10	108020461	.	TTA	T	5307.55	PASS	AB=0.776;AC=28;AF=0.500;AN=56;BaseQRankSum=13.085;DP=645;FS=7.611;HRun=0;HaplotypeScore=82.7166;InbreedingCoeff=-0.9998;MQ=58.17;MQ0=15;MQRankSum=-13.269;QD=8.23;ReadPosRankSum=4.580;VQSLOD=3.7023;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:31,14:45:99:325,0,1308	0/1:13,1:14:81.43:81,0,277	0/1:14,0:5:30.17:33,0,30	0/1:14,2:11:62.49:62,0,171	0/1:22,7:29:99:245,0,705	0/1:22,9:31:99:188,0,920	0/1:11,6:17:99:168,0,435	0/1:43,17:50:99:600,0,1317	0/1:9,6:15:50.25:50,0,400	0/1:9,4:12:99:131,0,272	0/1:17,8:25:99:240,0,560	0/1:14,0:14:30.72:31,0,404	0/1:17,5:22:99:103,0,804	0/1:5,8:13:99:139,0,172	0/1:6,4:10:73.02:73,0,287	0/1:6,5:11:97.53:98,0,204	0/1:29,16:45:99:475,0,1128	0/1:36,13:49:99:184,0,1554	0/1:32,5:32:89.08:89,0,1179	0/1:13,15:28:99:407,0,554	0/1:5,4:9:99:140,0,146	0/1:2,1:3:32.56:33,0,70	0/1:7,6:12:99:174,0,260	0/1:11,3:14:83.17:83,0,499	0/1:13,4:17:79.33:79,0,584	0/1:29,9:38:99:406,0,826	0/1:12,13:25:99:388,0,537	0/1:10,8:17:99:283,0,380
chr10	108021972	.	TTTTTGG	T	1690.79	PASS	AB=0.983;AC=28;AF=0.500;AN=56;BaseQRankSum=-2.217;DP=424;FS=13.202;HRun=0;HaplotypeScore=94.2825;InbreedingCoeff=-0.2034;MQ=40.47;MQ0=39;MQRankSum=-2.896;QD=5.79;ReadPosRankSum=-2.228;VQSLOD=0.5853;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:33:99:115,0,438	1/1:3,0:2:3.01:35,3,0	0/0:28,0:4:12.03:0,12,132	0/0:25,0:6:6.26:0,6,36	0/1:13,0:10:39.71:40,0,108	0/0:14,0:13:20.65:0,21,316	0/1:18,0:18:84.07:84,0,351	0/1:7,4:8:30.41:157,0,30	0/1:8,0:8:57.64:82,0,58	0/1:22,0:21:90.71:91,0,369	0/1:10,0:10:76.32:76,0,152	0/1:12,0:10:19.40:19,0,59	0/1:10,0:8:9.62:10,0,100	1/1:12,0:12:0.79:31,1,0	0/1:20,0:18:17.56:18,0,342	0/0:12,0:9:20.92:0,21,213	0/1:21,0:20:35.75:36,0,298	0/1:8,0:3:5.73:6,0,11	1/1:13,0:11:19.01:244,19,0	1/1:3,0:2:5.88:51,6,0	1/1:5,1:5:7.69:94,8,0	0/1:10,0:9:30.10:30,0,140	0/1:13,0:13:79.59:80,0,96	0/1:11,0:10:7.96:8,0,9	0/0:25,0:25:34.68:0,35,526	0/0:28,0:27:52.18:0,52,694	1/1:13,0:10:23.61:277,24,0	0/1:20,0:19:41.12:277,0,41
chr10	108021975	.	TTGG	T	4531.16	PASS	AB=0.987;AC=45;AF=0.804;AN=56;BaseQRankSum=4.296;DP=421;FS=32.738;HRun=0;HaplotypeScore=66.9758;InbreedingCoeff=-0.0216;MQ=40.74;MQ0=40;MQRankSum=-0.044;QD=12.18;ReadPosRankSum=7.633;VQSLOD=2.2704;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:47.18:504,47,0	1/1:3,0:2:3.01:35,3,0	0/0:26,0:3:9.02:0,9,99	0/0:23,0:5:1.72:0,2,4	1/1:14,1:12:0.14:112,0,0	0/1:13,0:12:10.20:51,0,10	0/1:16,0:16:8.02:189,0,8	1/1:9,0:6:1.40:144,1,0	1/1:8,0:8:13.58:136,14,0	0/1:21,0:20:10.79:250,0,11	0/1:10,0:10:1.01:177,0,1	1/1:13,0:11:13.76:116,14,0	1/1:12,0:10:3.15:157,3,0	1/1:13,0:13:5.91:51,6,0	0/1:19,0:17:5.42:223,0,5	1/1:11,0:8:0.14:19,0,0	1/1:21,0:20:30.41:277,30,0	1/1:8,0:3:0.19:19,0,0	1/1:5,7:10:21.07:257,21,0	1/1:2,0:2:6.02:68,6,0	1/1:7,0:5:8.98:97,9,0	0/1:9,0:9:14.90:75,0,15	1/1:15,0:15:12.16:188,12,0	1/1:11,0:10:5.79:53,6,0	1/1:22,0:23:3.48:207,3,0	0/1:28,0:27:51.97:223,0,52	1/1:13,0:10:24.03:250,24,0	1/1:22,1:22:52.52:652,53,0
chr10	108021976	.	TGG	T	6053.66	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=-0.683;DP=384;FS=0.000;HRun=4;HaplotypeScore=52.9025;InbreedingCoeff=0.4806;MQ=37.32;MQ0=40;MQRankSum=0.296;QD=17.75;ReadPosRankSum=0.185;VQSLOD=1.2298;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,7:33:79.07:662,79,0	1/1:2,1:2:3.01:35,3,0	0/0:25,0:3:9.02:0,9,99	./.	1/1:7,4:9:15.02:151,15,0	1/1:8,3:10:23.58:177,24,0	1/1:10,4:16:35.38:311,35,0	1/1:7,0:5:14.99:153,15,0	1/1:0,5:8:14.94:157,15,0	1/1:9,7:16:35.31:334,35,0	1/1:3,4:9:21.03:232,21,0	1/1:2,9:10:15.02:165,15,0	1/1:8,3:9:18.47:198,18,0	1/1:0,10:13:6.01:63,6,0	1/1:9,5:17:41.55:376,42,0	1/1:9,0:8:12.75:68,13,0	1/1:13,4:18:44.16:401,44,0	1/1:6,1:3:3.89:30,4,0	1/1:9,1:8:21.07:257,21,0	1/1:2,1:2:6.02:68,6,0	1/1:7,0:5:9.02:97,9,0	1/1:7,2:8:14.02:104,14,0	1/1:6,5:14:26.85:256,27,0	1/1:1,9:9:6.47:70,6,0	1/1:13,3:21:47.29:391,47,0	1/1:15,5:19:41.22:412,41,0	1/1:5,6:10:23.91:226,24,0	1/1:9,13:22:59.50:659,59,0
chr10	108022262	.	ATGTGTGCG	A	1434.56	PASS	AB=0.946;AC=9;AF=0.173;AN=52;BaseQRankSum=4.206;DP=852;FS=0.000;HRun=0;HaplotypeScore=201.6064;InbreedingCoeff=0.7700;MQ=49.06;MQ0=18;MQRankSum=-4.515;QD=8.20;ReadPosRankSum=-1.840;VQSLOD=2.1193;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:81.70:0,82,2794	./.	0/0:50,0:8:6.02:0,6,133	0/0:64,0:18:24.04:0,24,468	0/0:11,0:10:9.03:0,9,328	0/0:17,0:17:27.09:0,27,916	0/0:59,0:59:99:0,144,4845	0/1:33,2:33:18.84:426,0,19	0/0:36,0:35:93.21:0,93,2910	0/0:26,0:26:48.13:0,48,1425	0/0:5,0:5:9.03:0,9,375	1/1:4,18:22:20.05:531,20,0	0/0:28,0:28:57.17:0,57,1872	0/0:39,0:39:78.22:0,78,2725	0/0:23,0:23:45.15:0,45,1792	0/0:27,0:27:66.17:0,66,2484	0/0:37,0:37:90.24:0,90,3009	0/0:58,0:58:99:0,126,4618	1/1:8,4:10:12.01:253,12,0	./.	1/1:57,38:93:13.89:146,14,0	0/0:15,0:14:24.54:0,25,586	0/0:6,0:6:9:0,9,253	0/0:76,0:76:99:0,175,6061	0/0:19,0:19:31.04:0,31,1028	0/0:23,0:22:42.14:0,42,1499	1/1:4,7:11:8.60:230,9,0	0/0:18,0:18:53.91:0,54,1579
chr10	108022326	.	GTGTGCGTGTGCGTGTGCGTGTGCA	G	714.09	PASS	AB=1.000;AC=9;AF=0.173;AN=52;BaseQRankSum=7.925;DP=773;FS=17.333;HRun=0;HaplotypeScore=386.8067;InbreedingCoeff=0.6701;MQ=51.81;MQ0=15;MQRankSum=-5.126;QD=5.67;ReadPosRankSum=-3.333;VQSLOD=0.6660;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.21:0,60,4581	./.	0/0:47,0:9:24.08:0,24,626	0/0:45,0:15:32.99:0,33,942	0/0:5,0:5:9.03:0,9,422	0/0:17,0:17:51.18:0,51,3686	0/0:61,0:60:99:0,147,7605	1/1:25,0:24:11.49:356,11,0	0/0:33,0:33:96.32:0,96,6260	0/0:30,0:30:81.27:0,81,5848	0/0:7,0:7:15.05:0,15,1195	1/1:18,2:20:2.44:74,2,0	0/0:28,0:28:84.29:0,84,5354	0/0:35,0:35:99:0,105,8340	0/0:22,0:22:51.17:0,51,4063	0/0:26,0:26:69.18:0,69,4515	0/0:47,0:46:99:0,132,9533	0/0:47,0:47:99:0,129,8393	0/1:9,0:8:23.24:261,0,23	./.	1/1:63,3:64:0.98:111,1,0	0/0:9,0:9:15.52:0,16,1178	0/0:10,0:10:18.02:0,18,1221	0/0:76,0:76:99:0,202,13844	0/0:18,0:18:30.07:0,30,2134	0/0:25,0:25:69.24:0,69,5211	1/1:3,2:4:5.96:44,6,0	0/0:32,0:31:57.08:0,57,3917
chr10	108022331	.	C	CAT	1082.65	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=7.404;DP=749;FS=7.493;HRun=0;HaplotypeScore=113.2294;InbreedingCoeff=0.8838;MQ=51.25;MQ0=15;MQRankSum=-5.211;QD=11.16;ReadPosRankSum=-5.021;VQSLOD=1.1593;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.17:0,60,950	./.	0/0:47,0:12:32.78:0,33,437	0/0:43,0:12:32.64:0,33,387	0/0:5,0:5:9.03:0,9,145	0/0:18,0:18:51.11:0,51,796	0/0:52,0:51:99:0,141,2249	1/1:13,11:23:51.89:784,52,0	0/0:35,0:35:99:0,99,1493	0/0:29,0:29:81.18:0,81,1260	0/0:9,0:9:21.06:0,21,301	0/0:7,9:16:1.39:0,1,3	0/0:29,0:29:84.27:0,84,1313	0/0:40,0:40:99:0,108,1731	0/0:20,0:20:51.17:0,51,825	0/0:26,0:26:69.02:0,69,974	0/0:48,0:47:99:0,132,1991	0/0:47,0:47:99:0,113,1969	1/1:5,3:7:14.26:223,14,0	./.	1/1:29,30:56:8.50:102,8,0	0/0:7,0:7:15.05:0,15,239	0/0:10,0:10:15.05:0,15,244	0/0:72,0:72:99:0,202,3202	0/0:16,0:16:27.04:0,27,394	0/0:25,0:25:75.20:0,75,1154	1/1:3,3:5:7.27:118,7,0	0/0:29,0:28:57.04:0,57,814
chr10	108022348	.	GCA	G	1364.25	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=6.565;DP=717;FS=0.662;HRun=0;HaplotypeScore=102.1283;InbreedingCoeff=0.8630;MQ=51.81;MQ0=17;MQRankSum=-1.204;QD=12.40;ReadPosRankSum=-5.637;VQSLOD=2.0464;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.24:0,78,1583	./.	0/0:41,1:11:26.75:0,27,468	0/0:44,0:14:37.34:0,37,633	0/0:5,0:5:9.03:0,9,131	0/0:20,0:20:57.20:0,57,1130	0/0:53,1:53:99:0,144,2824	1/1:5,21:24:54.46:893,54,0	0/0:36,0:36:99:0,105,2059	0/0:28,0:28:84.24:0,84,1534	0/0:8,0:8:18.06:0,18,365	1/1:5,10:15:5.76:97,6,0	0/0:25,0:25:75.24:0,75,1458	0/0:41,0:41:99:0,120,2401	0/0:20,0:20:54.19:0,54,1095	0/0:23,0:23:63.22:0,63,1263	0/0:50,0:49:99:0,144,2841	0/0:40,0:40:88.79:0,89,2022	1/1:3,3:4:4.50:94,4,0	1/1:2,3:5:3.01:49,3,0	1/1:23,26:48:18.14:294,18,0	0/0:6,0:6:15.05:0,15,302	0/0:7,0:7:15.01:0,15,264	0/0:71,0:71:99:0,196,3806	0/0:13,0:13:24.07:0,24,466	0/0:23,0:23:66.08:0,66,1340	1/1:2,7:8:6.02:98,6,0	0/0:22,0:21:45.15:0,45,902
chr10	108022549	.	AGGAG	A	501.98	PASS	AC=12;AF=0.250;AN=48;BaseQRankSum=1.860;DP=254;FS=2.962;HRun=0;HaplotypeScore=40.8901;InbreedingCoeff=0.5627;MQ=66.11;MQ0=4;MQRankSum=-0.963;QD=7.17;ReadPosRankSum=-0.699;VQSLOD=1.1115;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:12.04:0,12,289	./.	./.	0/0:12,0:6:4.80:0,5,27	0/0:7,0:7:3.01:0,3,54	1/1:9,0:9:3:25,3,0	0/0:26,0:25:9.02:0,9,170	1/1:7,2:9:5.98:68,6,0	0/0:4,0:4:3.01:0,3,72	0/0:7,0:7:6.02:0,6,122	./.	0/0:8,0:8:6.02:0,6,143	0/0:6,0:6:9.01:0,9,164	0/0:10,0:10:12.01:0,12,238	0/0:16,0:16:27.08:0,27,576	0/0:5,0:5:9.03:0,9,217	0/0:9,0:9:6.02:0,6,145	0/0:6,0:6:6.02:0,6,142	1/1:8,0:7:3.01:47,3,0	1/1:2,2:3:2.97:48,3,0	1/1:27,1:25:21.02:265,21,0	0/0:9,0:9:12.03:0,12,239	0/0:6,0:6:6.02:0,6,144	0/0:13,0:13:12.03:0,12,241	0/0:3,0:3:6.01:0,6,98	0/0:6,0:6:3:0,3,27	1/1:2,10:12:12.04:193,12,0	./.
chr10	108022957	.	AGT	A	215.52	PASS	AB=0.962;AC=12;AF=0.240;AN=50;BaseQRankSum=0.452;DP=517;FS=0.948;HRun=0;HaplotypeScore=70.1187;InbreedingCoeff=-0.3594;MQ=44.62;MQ0=40;MQRankSum=-0.452;QD=1.04;ReadPosRankSum=0.609;VQSLOD=1.5214;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:52.03:0,52,668	./.	./.	./.	0/0:14,0:13:5.07:0,5,198	0/1:14,0:14:30.95:31,0,178	0/1:24,2:24:26.68:27,0,290	0/0:22,0:16:12.41:0,12,126	0/1:19,0:17:50.93:51,0,98	0/0:13,1:21:6.96:0,7,356	0/0:9,0:8:15.05:0,15,199	0/0:8,0:9:12.01:0,12,121	0/1:10,0:10:9.26:9,0,243	0/0:17,0:15:15.05:0,15,199	0/1:18,0:18:21.34:21,0,98	0/1:11,0:10:18.84:19,0,122	0/1:36,0:35:13.30:13,0,360	0/0:22,0:23:32.13:0,32,407	0/0:12,0:15:12.28:0,12,103	0/0:7,0:8:6:0,6,52	0/0:17,0:13:3:0,3,28	0/1:16,0:13:39.05:39,0,209	0/1:10,0:10:17.03:17,0,145	0/0:33,2:33:7.90:0,8,484	0/1:8,0:8:52.30:52,0,74	0/1:27,0:24:50.91:51,0,114	0/0:5,0:8:8.99:0,9,76	0/1:6,6:11:24.31:24,0,73
chr10	108023106	.	GGGCTGTAAAGCCGACTCGAGGATTGAGA	G	3706.79	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=6.953;DP=551;FS=19.979;HRun=0;HaplotypeScore=364.7708;InbreedingCoeff=0.9557;MQ=80.80;MQ0=0;MQRankSum=-7.278;QD=74.14;ReadPosRankSum=1.322;VQSLOD=1.7679;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.33:0,96,10992	0/0:7,0:7:21.07:0,21,2273	0/0:17,0:17:45.15:0,45,2922	0/0:17,0:17:45.15:0,45,2822	0/0:7,0:7:21.07:0,21,1824	0/0:27,0:27:75.26:0,75,8273	0/0:26,0:26:78.27:0,78,7820	./.	0/0:27,0:27:72.25:0,72,8728	0/0:27,0:27:78.26:0,78,6601	0/0:15,0:15:39.09:0,39,2993	0/0:22,0:22:57.20:0,57,6145	0/0:25,0:25:72.25:0,72,8000	0/0:20,0:20:54.19:0,54,5883	0/0:24,0:24:60.21:0,60,7208	0/0:15,0:15:45.15:0,45,5236	0/0:47,0:47:99:0,129,14613	0/0:19,0:19:51.18:0,51,6109	1/1:3,5:8:15.05:781,15,0	1/1:4,3:7:6.02:447,6,0	1/1:12,13:25:19.42:913,19,0	0/0:23,0:23:54.19:0,54,5301	0/0:7,0:7:15.05:0,15,1702	0/0:33,0:32:90.28:0,90,9527	0/0:18,0:18:48.15:0,48,4240	0/0:27,0:27:75.26:0,75,6752	1/1:2,8:10:21.07:1566,21,0	0/0:13,0:13:36.12:0,36,3841
chr10	108023134	.	A	AG	800.05	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=7.576;DP=525;FS=5.638;HRun=2;HaplotypeScore=90.4457;InbreedingCoeff=0.6412;MQ=74.19;MQ0=1;MQRankSum=-6.422;QD=13.12;ReadPosRankSum=-6.065;VQSLOD=0.4276;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,1227	0/0:7,0:7:21.07:0,21,260	0/0:18,0:18:45:0,45,518	0/0:12,0:11:27.08:0,27,323	0/0:9,0:9:27.08:0,27,335	0/0:21,0:21:57.16:0,57,692	0/0:29,0:29:78.22:0,78,953	1/1:7,6:13:39.12:511,39,0	0/0:29,0:29:84.26:0,84,1041	0/0:15,0:15:39.12:0,39,484	0/0:8,0:8:24.08:0,24,298	0/0:21,0:21:60.19:0,60,743	0/0:24,0:24:72.23:0,72,892	0/0:26,0:26:72.23:0,72,890	0/0:28,0:28:81.25:0,81,1003	0/0:16,0:16:45.14:0,45,558	0/0:46,0:46:99:0,129,1571	0/0:21,0:21:63.17:0,63,766	0/1:6,0:6:3.36:72,0,3	0/1:4,0:4:3.23:34,0,3	1/1:29,0:29:29:300,29,0	0/0:12,0:12:36.11:0,36,446	0/0:9,0:9:24.08:0,24,297	0/0:35,0:34:93.29:0,93,1152	0/0:11,0:11:24.07:0,24,297	0/0:23,0:23:69.22:0,69,855	0/1:9,0:8:18.79:27,0,19	0/0:8,0:8:24.08:0,24,297
chr10	108023628	.	C	CT	5700.88	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-8.478;DP=520;FS=2.142;HRun=1;HaplotypeScore=55.2557;InbreedingCoeff=0.9812;MQ=78.07;MQ0=0;MQRankSum=-0.760;QD=42.23;ReadPosRankSum=-0.779;VQSLOD=4.7965;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:93.28:0,93,1191	0/0:5,0:5:15.05:0,15,195	0/0:14,0:14:42.09:0,42,496	0/0:14,0:14:42.06:0,42,458	0/0:13,0:13:39.06:0,39,484	0/0:12,0:12:36.12:0,36,463	0/0:34,0:34:99:0,99,1257	1/1:0,23:23:69.18:954,69,0	0/0:24,0:24:66.21:0,66,856	0/0:26,0:25:75.20:0,75,944	0/0:8,0:8:23.75:0,24,282	1/1:0,31:31:93.31:1387,93,0	0/0:13,0:13:39.13:0,39,505	0/0:17,0:17:51.15:0,51,635	0/0:11,0:11:33.11:0,33,428	0/0:14,0:14:42.12:0,42,531	0/0:34,0:34:99:0,102,1323	0/0:27,0:27:75.24:0,75,973	1/1:0,8:8:21.03:290,21,0	1/1:0,8:8:21:287,21,0	1/1:1,45:46:99:1975,132,0	0/0:13,0:13:39.13:0,39,506	0/0:8,0:8:18.06:0,18,233	0/0:31,0:31:90.28:0,90,1152	0/0:14,0:14:42:0,42,521	0/0:18,0:18:48.15:0,48,609	1/1:0,19:19:54.18:808,54,0	0/0:3,0:3:9:0,9,99
chr10	108023707	.	G	GT	1774.48	PASS	AB=0.898;AC=12;AF=0.214;AN=56;BaseQRankSum=1.182;DP=444;FS=1.625;HRun=1;HaplotypeScore=95.9462;InbreedingCoeff=0.3214;MQ=64.90;MQ0=5;MQRankSum=-0.481;QD=8.83;ReadPosRankSum=0.464;VQSLOD=1.0271;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,3:30:55.33:165,0,55	0/0:6,0:6:10.15:0,10,81	0/0:15,0:14:23.51:0,24,232	0/0:13,0:9:20.85:0,21,178	0/0:4,0:4:6:0,6,53	0/0:6,0:6:8.71:0,9,58	0/0:24,0:24:35.02:0,35,514	1/1:9,2:12:5.17:118,5,0	0/0:24,0:24:44.57:0,45,426	0/0:14,0:14:20.35:0,20,215	0/0:9,0:9:5.89:0,6,56	1/1:7,19:25:75.02:799,75,0	0/0:16,0:16:26.56:0,27,216	0/0:16,0:16:32.75:0,33,322	0/0:14,0:14:18.27:0,18,212	0/0:15,0:15:35.91:0,36,398	0/1:22,1:23:50.09:95,0,50	0/1:25,0:25:18.49:37,0,18	0/1:11,1:10:5.68:103,0,6	1/1:4,1:5:5.60:46,6,0	0/1:39,10:47:89.17:402,0,89	0/0:11,0:11:11.90:0,12,122	0/0:5,0:5:8.90:0,9,88	0/0:23,0:23:51.77:0,52,489	0/0:13,0:13:14.85:0,15,137	0/0:8,0:8:4.50:0,4,45	0/1:11,5:15:0.44:167,0,0	0/0:7,0:7:11.90:0,12,135
chr10	108023718	.	G	GA	2042.44	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=2.011;DP=423;FS=3.091;HRun=0;HaplotypeScore=71.4049;InbreedingCoeff=0.9441;MQ=60.00;MQ0=5;MQRankSum=-1.824;QD=17.92;ReadPosRankSum=-0.324;VQSLOD=5.2777;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:25:68.71:0,69,796	0/0:7,0:7:11.88:0,12,100	0/0:8,0:8:5.95:0,6,109	0/0:10,0:7:17.18:0,17,191	0/0:6,0:6:15.43:0,15,119	0/0:6,0:6:14.80:0,15,101	0/0:21,0:21:59.98:0,60,600	1/1:11,1:12:25.84:226,26,0	0/0:22,0:23:64.61:0,65,560	0/0:14,0:14:35.94:0,36,319	0/0:12,0:12:29.13:0,29,205	1/1:27,0:26:77.70:775,78,0	0/0:13,0:13:26.66:0,27,220	0/0:16,0:17:44.66:0,45,408	0/0:13,0:13:38.50:0,39,276	0/0:15,0:15:41.96:0,42,435	0/0:20,0:20:59.47:0,59,679	0/0:25,0:25:71.85:0,72,880	1/1:4,8:10:28.48:235,28,0	1/1:4,1:5:8.63:70,9,0	1/1:41,4:44:81.18:707,81,0	0/0:11,0:11:21.28:0,21,168	0/0:5,0:5:14.58:0,15,117	0/0:22,0:22:53.70:0,54,505	0/0:13,0:13:26.34:0,26,231	0/0:11,0:11:23.90:0,24,227	1/1:8,4:11:27.71:214,28,0	0/0:7,0:7:17.96:0,18,183
chr10	108024657	.	C	CA	368.33	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.932;DP=327;FS=0.000;HRun=0;HaplotypeScore=38.4356;InbreedingCoeff=0.8063;MQ=78.15;MQ0=12;MQRankSum=-0.724;QD=28.33;ReadPosRankSum=0.424;VQSLOD=3.6802;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:84.20:0,84,1072	0/0:6,0:6:18.06:0,18,249	0/0:33,0:14:29.90:0,30,330	0/0:28,0:14:26.26:0,26,245	0/0:7,0:7:21.06:0,21,276	0/0:13,0:13:30.08:0,30,401	0/0:17,0:17:42.13:0,42,570	0/0:12,0:12:29.05:0,29,317	0/0:7,0:7:21.06:0,21,276	0/0:9,0:9:21.02:0,21,257	0/0:3,0:3:8.98:0,9,103	1/1:2,11:13:33.04:463,33,0	0/0:10,0:10:30.09:0,30,398	0/0:7,0:7:21.04:0,21,247	0/0:13,0:13:33.07:0,33,411	0/0:9,0:9:27.04:0,27,350	0/0:19,0:19:51.15:0,51,670	0/0:17,0:17:51.15:0,51,676	0/0:9,0:9:24.05:0,24,313	0/0:7,0:7:18.06:0,18,242	0/0:14,0:14:39.09:0,39,490	0/0:4,0:4:12.04:0,12,167	0/0:5,0:5:15.01:0,15,158	0/0:3,0:3:9.01:0,9,94	0/0:4,0:4:12.02:0,12,136	0/0:12,0:12:36.07:0,36,453	0/0:9,0:9:27.09:0,27,367	0/0:8,0:8:23.93:0,24,251
chr10	108024726	.	TGTTACAGGCTGCTGAG	T	1683.77	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.837;DP=481;FS=11.614;HRun=0;HaplotypeScore=202.3769;InbreedingCoeff=0.7863;MQ=86.79;MQ0=0;MQRankSum=-5.773;QD=80.18;ReadPosRankSum=4.398;VQSLOD=2.4632;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,123,6023	0/0:6,0:6:15.05:0,15,919	0/0:20,0:20:48.16:0,48,2795	0/0:16,0:16:36.12:0,36,2057	0/0:16,0:16:18.06:0,18,766	0/0:11,0:11:27.09:0,27,1150	0/0:24,0:24:60.21:0,60,4155	0/0:18,0:18:42.13:0,42,2103	0/0:16,0:16:48.16:0,48,3727	0/0:19,0:19:42.14:0,42,1909	0/0:7,0:7:15.05:0,15,416	1/1:5,16:21:39.13:1778,39,0	0/0:14,0:14:39.13:0,39,2556	0/0:13,0:13:39.13:0,39,3022	0/0:19,0:19:54.19:0,54,3899	0/0:14,0:14:33.11:0,33,2322	0/0:34,0:34:99:0,99,7363	0/0:18,0:18:48.16:0,48,3424	0/0:21,0:21:48.16:0,48,2361	0/0:2,0:2:6.01:0,6,71	0/0:37,0:37:99:0,102,5517	0/0:4,0:4:6.02:0,6,169	0/0:7,0:7:15.05:0,15,694	0/0:25,0:25:75.26:0,75,5767	0/0:10,0:10:30.05:0,30,1297	0/0:19,0:19:48.16:0,48,2163	0/0:16,0:16:48.16:0,48,3541	0/0:9,0:9:27.09:0,27,1997
chr10	108025004	.	CTATTAT	C	1306.49	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=10.863;DP=418;FS=8.738;HRun=0;HaplotypeScore=99.1190;InbreedingCoeff=0.6247;MQ=73.40;MQ0=2;MQRankSum=-5.366;QD=12.21;ReadPosRankSum=1.556;VQSLOD=1.8547;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:84.24:0,84,2160	1/1:10,0:10:25.25:213,25,0	0/0:14,0:9:19.86:0,20,318	0/0:17,0:15:32.76:0,33,483	0/0:8,0:8:15.02:0,15,278	0/0:18,0:17:51.14:0,51,1355	0/0:12,0:12:27.05:0,27,492	0/1:29,0:29:39.67:248,0,40	0/0:10,0:10:20.90:0,21,432	0/0:24,0:24:63.20:0,63,1564	0/0:12,0:12:30.09:0,30,855	1/1:3,5:8:15.05:329,15,0	0/0:13,0:13:24.07:0,24,432	0/0:18,0:18:48.11:0,48,1189	0/0:5,0:5:12.04:0,12,351	0/0:9,0:9:21.06:0,21,579	0/0:29,0:29:75.21:0,75,2147	0/0:18,0:17:45.08:0,45,1171	0/1:23,0:23:92.83:234,0,93	1/1:10,0:9:18.87:156,19,0	0/1:11,0:11:13.86:48,0,14	0/0:4,0:4:12.04:0,12,343	0/0:7,0:7:21.07:0,21,438	0/0:14,0:14:27.09:0,27,794	0/0:7,0:7:21.07:0,21,615	0/0:26,0:25:63.22:0,63,1615	1/1:16,0:16:8.77:247,9,0	0/0:12,0:12:18.02:0,18,375
chr10	108025012	.	ATTATT	A	3449.65	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=6.261;DP=416;FS=15.417;HRun=0;HaplotypeScore=82.8868;InbreedingCoeff=0.7803;MQ=64.87;MQ0=14;MQRankSum=-5.000;QD=28.75;ReadPosRankSum=1.020;VQSLOD=2.2330;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:99:0,109,2001	1/1:0,10:10:27.05:518,27,0	0/0:12,0:7:14.76:0,15,246	0/0:13,0:11:23.66:0,24,264	0/1:10,0:9:33.64:34,0,176	0/0:18,0:17:48.12:0,48,1088	0/0:13,0:12:27.02:0,27,422	1/1:7,23:28:64.91:946,65,0	0/0:9,0:9:22.76:0,23,312	0/0:24,0:24:65.67:0,66,1274	0/0:13,0:13:38.49:0,38,933	0/1:11,0:11:35.95:128,0,36	0/0:10,0:10:26.99:0,27,332	0/0:14,0:14:39.11:0,39,929	0/0:4,0:4:12.03:0,12,286	0/0:9,0:8:24.03:0,24,491	0/0:30,0:30:78.16:0,78,1871	0/0:17,0:16:45.09:0,45,1025	1/1:13,8:20:15.80:679,16,0	1/1:6,6:10:17.69:408,18,0	1/1:2,8:10:8.97:146,9,0	0/0:6,0:6:18:0,18,334	0/0:9,0:7:21.01:0,21,288	0/0:10,0:10:27.02:0,27,686	0/0:11,0:11:23.07:0,23,536	0/0:26,0:25:68.40:0,68,1339	1/1:3,11:14:30.09:591,30,0	0/0:7,0:7:20.26:0,20,360
chr10	108026651	.	CGTTG	C	686.99	PASS	AB=0.667;AC=3;AF=0.054;AN=56;BaseQRankSum=8.231;DP=537;FS=3.982;HRun=0;HaplotypeScore=100.7774;InbreedingCoeff=0.6342;MQ=64.91;MQ0=3;MQRankSum=-7.621;QD=25.44;ReadPosRankSum=1.510;VQSLOD=3.5534;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.26:0,87,2365	0/1:4,4:8:99:149,0,204	0/0:18,0:12:27.06:0,27,768	0/0:11,0:9:27.09:0,27,747	0/0:11,0:11:33.11:0,33,928	0/0:17,0:17:45.15:0,45,1243	0/0:29,0:29:87.30:0,87,2519	0/0:25,0:22:60.21:0,60,1718	0/0:16,0:16:48.16:0,48,1391	0/0:23,0:23:69.24:0,69,1972	0/0:8,0:8:21.07:0,21,598	1/1:1,18:19:57.07:645,57,0	0/0:19,0:19:57.20:0,57,1648	0/0:20,0:20:60.21:0,60,1730	0/0:17,0:18:51.18:0,51,1480	0/0:11,0:11:33.11:0,33,961	0/0:44,0:44:99:0,132,3589	0/0:31,0:31:90.31:0,90,2607	0/0:35,0:35:96.33:0,96,2744	0/0:5,0:5:15.05:0,15,423	0/0:53,0:52:99:0,157,4493	0/0:11,0:11:33.11:0,33,954	0/0:7,0:7:21.07:0,21,607	0/0:20,0:20:60.21:0,60,1720	0/0:9,0:9:27.09:0,27,782	0/0:18,0:18:54.19:0,54,1551	0/0:13,0:13:39.13:0,39,1087	0/0:8,0:8:24.08:0,24,692
chr10	108026657	.	A	ACGG	981.36	PASS	AB=0.636;AC=3;AF=0.054;AN=56;BaseQRankSum=8.256;DP=537;FS=2.717;HRun=0;HaplotypeScore=90.5453;InbreedingCoeff=0.6260;MQ=63.87;MQ0=3;MQRankSum=-8.168;QD=37.74;ReadPosRankSum=1.786;VQSLOD=4.3946;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.29:0,84,1558	0/1:3,4:7:90.72:209,0,91	0/0:17,0:11:30.10:0,30,540	0/0:15,0:10:30.10:0,30,527	0/0:9,0:9:27.09:0,27,485	0/0:17,0:17:42.14:0,42,783	0/0:29,0:29:84.27:0,84,1535	0/0:25,0:22:60.21:0,60,1116	0/0:17,0:17:51.17:0,51,951	0/0:22,0:22:66.23:0,66,1212	0/0:8,0:8:24.08:0,24,438	1/1:1,17:19:57.19:878,57,0	0/0:18,0:18:54.15:0,54,942	0/0:20,0:20:57.18:0,57,1031	0/0:17,0:17:51.17:0,51,951	0/0:12,0:12:33.11:0,33,599	0/0:42,0:42:99:0,123,2175	0/0:33,0:33:99:0,99,1823	0/0:32,0:32:90.30:0,90,1647	0/0:4,0:4:12.04:0,12,224	0/0:57,0:56:99:0,163,2922	0/0:12,0:12:33.11:0,33,614	0/0:6,0:6:18.06:0,18,336	0/0:19,0:19:57.20:0,57,1063	0/0:9,0:9:27.09:0,27,503	0/0:19,0:19:57.20:0,57,1055	0/0:14,0:14:42.13:0,42,737	0/0:7,0:7:21.07:0,21,392
chr10	108028960	.	C	CA	5074.80	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-10.689;DP=535;FS=0.392;HRun=0;HaplotypeScore=55.4576;InbreedingCoeff=0.9609;MQ=88.17;MQ0=0;MQRankSum=-1.727;QD=39.96;ReadPosRankSum=-0.713;VQSLOD=4.8378;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.27:0,84,1153	1/1:0,14:14:36.12:572,36,0	0/0:24,0:24:69.14:0,69,912	0/0:17,0:17:45.09:0,45,568	0/0:21,0:21:57.19:0,57,792	0/0:20,0:20:57.18:0,57,774	0/0:29,0:29:81.23:0,81,1091	1/1:1,14:15:42.12:645,42,0	0/0:20,0:20:60.14:0,60,780	0/0:21,0:21:54.03:0,54,690	0/0:15,0:15:42.14:0,42,584	1/1:0,16:16:39.02:622,39,0	0/0:8,0:8:23.99:0,24,307	0/0:11,0:11:33.11:0,33,447	0/0:16,0:16:48.16:0,48,668	0/0:16,0:16:48.16:0,48,665	0/0:45,0:45:99:0,132,1783	0/0:41,0:41:99:0,123,1643	1/1:2,22:24:66.21:1029,66,0	1/1:0,8:8:23.90:295,24,0	1/1:1,36:37:84.29:1340,84,0	0/0:6,0:6:18.06:0,18,251	0/0:4,0:4:12.04:0,12,166	0/0:25,0:25:72.24:0,72,1000	0/0:9,0:9:27.09:0,27,376	0/0:28,0:28:78.26:0,78,1082	1/1:0,13:13:36.12:571,36,0	0/0:1,0:1:3.01:0,3,42
chr10	108029660	.	TG	T	2177.17	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=7.186;DP=579;FS=24.717;HRun=1;HaplotypeScore=71.3327;InbreedingCoeff=0.8547;MQ=69.34;MQ0=8;MQRankSum=-9.006;QD=22.22;ReadPosRankSum=-5.812;VQSLOD=1.0926;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,117,1813	0/0:6,0:5:1.90:0,2,34	0/0:41,0:19:40.71:0,41,477	0/0:37,0:18:30.90:0,31,302	0/0:15,0:15:36.05:0,36,432	0/0:14,0:13:20.09:0,20,417	0/0:13,0:12:33.03:0,33,367	1/1:6,17:23:62.70:720,63,0	0/0:16,0:16:42.82:0,43,450	0/0:40,0:37:99:0,101,1234	0/0:5,0:5:11.96:0,12,125	0/1:15,0:14:3.72:4,0,157	0/0:9,0:9:24.05:0,24,282	0/0:17,0:17:48.11:0,48,587	0/0:20,0:20:43.69:0,44,661	0/0:19,0:18:43.75:0,44,583	0/0:41,1:42:47.53:0,48,1148	0/0:20,1:21:44.97:0,45,594	1/1:2,23:25:71.98:818,72,0	1/1:0,16:16:29.95:330,30,0	1/1:1,3:4:8.82:96,9,0	0/0:13,0:13:29.51:0,30,349	0/0:14,0:14:36.02:0,36,437	0/0:33,0:33:65.19:0,65,827	0/0:15,0:15:36.98:0,37,440	0/0:22,0:22:65.18:0,65,804	1/1:6,9:15:33.03:381,33,0	0/0:15,0:15:45.05:0,45,510
chr10	108029669	.	CT	C	512.98	PASS	AB=0.869;AC=14;AF=0.250;AN=56;BaseQRankSum=6.613;DP=575;FS=3.183;HRun=14;HaplotypeScore=72.6830;InbreedingCoeff=0.4089;MQ=60.11;MQ0=15;MQRankSum=-4.525;QD=2.50;ReadPosRankSum=-1.426;VQSLOD=-0.4585;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,1:53:62.08:0,62,778	0/0:6,0:5:9.48:0,9,51	0/1:38,1:13:9.44:9,0,35	0/1:36,0:15:2.39:2,0,46	0/1:9,4:13:13.85:14,0,90	0/0:11,0:11:13.91:0,14,140	0/0:8,2:8:17.96:0,18,154	1/1:15,12:27:34.99:240,35,0	0/0:17,0:17:9.40:0,9,206	0/0:37,0:34:65.19:0,65,565	0/1:5,1:6:7.06:7,0,55	0/0:11,0:10:12.66:0,13,61	0/0:10,0:11:17.73:0,18,140	0/0:12,0:14:20.86:0,21,181	0/0:18,0:18:18.80:0,19,292	0/0:17,0:16:10.07:0,10,250	0/0:43,0:44:80.10:0,80,693	0/1:15,1:19:2.98:3,0,251	1/1:23,5:28:22.03:159,22,0	1/1:11,5:16:17.76:118,18,0	0/1:3,3:6:18.37:19,0,18	0/0:16,1:17:0.44:0,0,224	0/0:15,0:14:16.98:0,17,149	0/0:35,0:34:59.32:0,59,516	0/0:14,1:15:11.01:0,11,219	0/0:24,1:24:4.96:0,5,319	1/1:8,5:12:18.57:110,19,0	0/0:12,0:12:15.98:0,16,147
chr10	108032156	.	G	GCCT	2130.19	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=1.620;DP=628;FS=26.886;HRun=0;HaplotypeScore=119.7851;InbreedingCoeff=0.8708;MQ=54.34;MQ0=5;MQRankSum=-1.623;QD=20.29;ReadPosRankSum=-2.496;VQSLOD=1.4582;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,117,1701	0/0:7,0:7:18.06:0,18,262	0/0:20,0:13:18.06:0,18,256	0/0:34,0:26:29.44:0,29,459	0/0:18,0:18:36.12:0,36,527	0/0:24,0:24:54.13:0,54,753	0/0:26,0:25:60.18:0,60,851	1/1:10,18:28:59.92:896,60,0	0/0:25,0:24:43.59:0,44,809	0/0:30,0:29:66.20:0,66,926	0/0:12,0:12:21.05:0,21,268	0/0:9,0:9:18.05:0,18,246	0/0:27,0:27:72.24:0,72,1053	0/0:21,0:19:48.16:0,48,691	0/0:21,0:21:51.17:0,51,754	0/0:24,0:24:63.14:0,63,895	0/0:31,0:31:69.17:0,69,964	0/0:21,0:21:45.15:0,45,658	1/1:12,1:12:15.05:260,15,0	1/1:8,12:19:27.09:481,27,0	1/1:6,18:24:15.05:263,15,0	0/0:19,0:19:48.04:0,48,689	0/1:8,0:8:31.86:32,0,239	0/0:48,0:47:99:0,108,1573	0/0:20,0:20:57.15:0,57,799	0/0:27,0:27:75.22:0,75,1083	1/1:1,11:12:18.06:374,18,0	0/0:14,0:14:21.07:0,21,305
chr10	108033439	.	TTCC	T	1545.81	PASS	AB=0.977;AC=20;AF=0.435;AN=46;BaseQRankSum=3.717;DP=534;FS=19.678;HRun=0;HaplotypeScore=142.6319;InbreedingCoeff=-0.5706;MQ=38.37;MQ0=17;MQRankSum=-6.509;QD=3.53;ReadPosRankSum=-5.047;VQSLOD=-0.6870;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,1:22:10.08:0,10,913	0/1:3,1:3:9.88:40,0,10	./.	0/1:9,0:4:2.07:2,0,59	0/1:29,1:29:99:135,0,828	0/1:12,0:12:54.85:55,0,252	0/1:31,0:27:99:103,0,448	0/0:6,0:2:3.01:0,3,62	0/1:23,0:19:35.30:35,0,522	0/1:44,1:40:99:162,0,1351	0/1:21,0:18:4.84:5,0,588	1/1:3,12:13:24.04:323,24,0	0/1:23,0:19:17.47:17,0,768	0/0:20,0:19:5.30:0,5,638	0/0:30,0:27:12.04:0,12,953	0/1:25,0:24:11.02:11,0,859	0/1:24,0:24:87.40:87,0,848	0/1:22,0:21:99:139,0,633	./.	./.	./.	0/1:34,1:31:44.36:44,0,995	0/1:19,0:19:99:177,0,524	0/1:25,0:21:7.14:7,0,505	0/1:27,1:27:99:238,0,573	0/1:37,0:34:61.05:61,0,1248	./.	0/1:9,1:10:40.30:40,0,349
chr10	108033442	.	C	CTCT	2641.02	PASS	AB=0.921;AC=19;AF=0.396;AN=48;BaseQRankSum=1.949;DP=582;FS=27.280;HRun=0;HaplotypeScore=152.4042;InbreedingCoeff=-0.4733;MQ=38.98;MQ0=20;MQRankSum=-5.258;QD=5.78;ReadPosRankSum=-4.306;VQSLOD=0.2270;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:23:50.46:0,50,787	0/1:6,0:4:3.79:4,0,8	0/0:6,0:2:2.98:0,3,21	0/1:12,0:5:1.59:2,0,61	0/1:29,2:30:99:154,0,685	0/1:14,0:13:7.45:7,0,223	0/1:30,4:30:99:165,0,508	0/0:7,0:2:3.01:0,3,51	0/1:23,0:20:31.48:31,0,450	0/1:45,2:42:99:344,0,1154	0/1:20,5:22:99:167,0,442	1/1:15,0:13:23.52:379,24,0	0/1:24,0:19:87.46:87,0,624	0/1:13,5:19:28.65:29,0,537	0/0:33,0:30:24.92:0,25,839	0/0:28,0:26:7.87:0,8,745	0/1:23,2:25:99:109,0,692	0/1:23,1:23:99:198,0,544	./.	./.	./.	0/1:38,3:37:99:112,0,853	0/1:15,6:21:99:306,0,424	0/1:26,0:22:13.75:14,0,409	0/1:23,6:28:99:354,0,551	0/1:35,4:36:99:320,0,1025	./.	0/0:11,0:11:8.23:0,8,286
chr10	108033615	.	T	TTCC	854.90	PASS	AB=0.966;AC=13;AF=0.250;AN=52;BaseQRankSum=11.386;DP=858;FS=2.471;HRun=0;HaplotypeScore=161.5637;InbreedingCoeff=-0.1361;MQ=45.61;MQ0=69;MQRankSum=-10.585;QD=2.30;ReadPosRankSum=0.633;VQSLOD=2.8459;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:51,3:53:65.97:66,0,1503	0/0:16,0:12:20.39:0,20,229	./.	./.	0/0:30,0:25:60.16:0,60,849	0/1:18,2:17:21.84:22,0,509	0/0:56,1:50:62.12:0,62,1515	0/1:14,0:4:34.46:34,0,38	0/1:33,0:30:33.77:34,0,896	0/0:40,0:34:86.16:0,86,1357	0/0:27,0:21:45.11:0,45,665	0/0:37,0:23:9.41:0,9,238	0/1:32,1:28:39.71:40,0,870	0/0:34,0:29:69.22:0,69,1035	0/0:39,0:37:76.62:0,77,1222	0/0:39,3:34:24.60:0,25,1131	0/1:43,3:43:48.14:48,0,1324	0/1:31,4:33:99:202,0,998	0/1:14,0:7:44.30:44,0,78	0/1:24,0:23:53.29:322,0,53	0/1:28,0:18:17.88:18,0,122	0/0:34,0:31:66.13:0,66,943	0/0:24,0:21:54.06:0,54,715	0/0:54,3:56:99:0,102,1918	0/0:28,1:27:13.59:0,14,925	0/1:51,2:45:19.39:19,0,1546	1/1:15,0:13:18.15:160,18,0	0/0:15,0:14:32.70:0,33,469
chr10	108033654	.	TTCC	T	175.15	PASS	AB=0.976;AC=9;AF=0.167;AN=54;BaseQRankSum=8.348;DP=835;FS=0.760;HRun=0;HaplotypeScore=141.9291;InbreedingCoeff=0.2621;MQ=47.35;MQ0=62;MQRankSum=-8.123;QD=1.36;ReadPosRankSum=-1.245;VQSLOD=2.4000;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:67,1:64:99:0,110,2826	0/0:15,0:12:18.05:0,18,225	./.	0/0:3,0:1:3.01:0,3,44	0/0:25,0:20:42.10:0,42,725	0/1:21,1:19:32.22:32,0,723	0/0:49,2:44:34.30:0,34,1649	1/1:24,0:14:5.05:48,5,0	0/0:43,0:38:62.94:0,63,1535	0/0:36,0:30:48.27:0,48,1349	0/0:23,0:20:39.13:0,39,772	0/1:33,1:27:4.82:5,0,507	0/0:45,0:40:48.79:0,49,1733	0/0:36,0:32:75.24:0,75,1492	0/0:43,0:41:87.24:0,87,1647	0/0:43,0:35:76.69:0,77,1355	0/0:36,2:35:66.03:0,66,1260	0/0:28,1:28:37.63:0,38,1200	0/1:11,0:5:74.72:75,0,105	0/1:12,0:8:15.16:43,0,15	0/1:18,1:11:36.98:37,0,54	0/0:25,0:23:42.14:0,42,838	0/0:23,0:20:48.16:0,48,977	0/0:63,1:63:99:0,136,2695	0/0:25,0:23:48.16:0,48,965	0/0:54,0:48:99:0,114,2237	1/1:7,0:5:8.93:72,9,0	0/0:13,0:11:24.08:0,24,505
chr10	108033692	.	CTTCTTT	C	422.76	PASS	AB=0.963;AC=7;AF=0.125;AN=56;BaseQRankSum=7.796;DP=734;FS=10.426;HRun=0;HaplotypeScore=155.4812;InbreedingCoeff=0.6164;MQ=51.69;MQ0=19;MQRankSum=-6.137;QD=8.99;ReadPosRankSum=-2.300;VQSLOD=1.5930;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:52:99:0,144,4622	0/0:15,0:13:30.08:0,30,817	0/0:32,0:9:18.84:0,19,468	0/0:46,0:18:38.36:0,38,1115	0/0:20,0:20:57.18:0,57,1681	0/0:25,0:22:40.33:0,40,1932	0/0:38,0:35:99:0,105,3604	0/1:8,0:7:5.61:6,0,177	0/0:31,0:28:75.26:0,75,2608	0/0:35,0:34:99:0,102,3122	0/0:17,0:15:36.11:0,36,1266	0/0:35,1:30:81.28:0,81,2560	0/0:31,0:29:62.14:0,62,2645	0/0:26,0:25:75.25:0,75,2516	0/0:28,0:26:69.24:0,69,2377	0/0:30,0:28:78.26:0,78,2558	0/0:31,0:31:58.57:0,59,2747	0/0:24,0:23:63.18:0,63,1988	0/1:7,1:3:20.64:70,0,21	1/1:6,4:10:20.92:206,21,0	0/1:8,0:8:0:0,0,0	0/0:27,0:26:75.26:0,75,2449	0/0:17,0:17:51.11:0,51,1533	0/0:54,0:53:99:0,136,4727	0/0:24,0:23:66:0,66,1744	0/0:37,0:34:99:0,102,3466	1/1:4,9:13:8.68:266,9,0	0/0:7,0:7:21.07:0,21,500
chr10	108033696	.	TTTC	T	218.64	PASS	AB=0.893;AC=5;AF=0.093;AN=54;BaseQRankSum=6.454;DP=737;FS=15.111;HRun=0;HaplotypeScore=122.2567;InbreedingCoeff=0.3078;MQ=53.62;MQ0=14;MQRankSum=-6.104;QD=5.47;ReadPosRankSum=-2.231;VQSLOD=1.3748;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,147,3268	0/0:13,0:12:30.06:0,30,611	0/0:35,0:9:19.61:0,20,397	0/0:54,0:21:49.24:0,49,952	0/0:19,0:19:48.16:0,48,1063	0/0:26,0:23:47.87:0,48,1369	0/0:41,1:38:99:0,111,2516	0/1:5,2:7:80.48:87,0,80	0/0:32,0:29:78.27:0,78,1782	0/0:35,0:34:99:0,99,2135	0/0:17,0:15:36.12:0,36,832	0/0:35,0:30:84.24:0,84,1848	0/0:31,0:29:80.47:0,80,1773	0/0:23,0:23:69.21:0,69,1499	0/0:30,0:28:69.22:0,69,1514	0/0:31,0:30:84.22:0,84,1714	0/0:28,0:28:78.10:0,78,1751	0/0:22,0:22:57.15:0,57,1216	1/1:6,0:2:2.37:8,2,0	0/1:8,1:9:45.63:79,0,46	./.	0/0:30,0:29:78.26:0,78,1705	0/0:16,0:16:48.15:0,48,1059	0/0:52,1:52:99:0,123,3000	0/0:20,0:19:51.17:0,51,1170	0/0:37,0:34:99:0,102,2205	0/1:18,0:17:3.43:150,0,3	0/0:7,0:7:21.07:0,21,457
chr10	108033707	.	CCTCCTTCCT	C	793.33	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.159;DP=728;FS=22.049;HRun=0;HaplotypeScore=188.7446;InbreedingCoeff=0.8195;MQ=53.81;MQ0=22;MQRankSum=-6.792;QD=25.59;ReadPosRankSum=-0.997;VQSLOD=1.7101;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:52:99:0,144,6975	0/0:10,0:10:27.09:0,27,1244	0/0:37,0:9:13.59:0,14,690	0/0:54,0:19:39.73:0,40,1578	0/0:19,0:19:51.17:0,51,2262	0/0:25,0:22:53.74:0,54,2682	0/0:45,0:42:99:0,123,5228	0/0:12,0:11:6.61:0,7,320	0/0:32,0:30:84.29:0,84,4005	0/0:30,0:29:87.28:0,87,4053	0/0:19,0:17:45.15:0,45,2023	0/0:31,0:27:75.26:0,75,3517	0/0:32,0:30:81.28:0,81,3572	0/0:23,0:23:69.24:0,69,3233	0/0:28,0:26:69.24:0,69,3191	0/0:27,0:27:75.26:0,75,3726	0/0:29,0:29:82.83:0,83,3924	0/0:23,0:23:57.12:0,57,2094	1/1:4,0:2:3.01:75,3,0	1/1:7,2:9:10.12:220,10,0	0/0:6,0:6:2.92:0,3,17	0/0:32,0:32:84.29:0,84,3776	0/0:18,0:18:51.16:0,51,2242	0/0:52,0:51:99:0,122,6449	0/0:20,0:19:54.19:0,54,2563	0/0:33,0:31:93.32:0,93,4446	1/1:11,7:17:23.85:624,24,0	0/0:7,0:7:21.07:0,21,996
chr10	108033712	.	TTC	T	1009.27	PASS	AB=0.846;AC=9;AF=0.161;AN=56;BaseQRankSum=9.643;DP=736;FS=49.899;HRun=0;HaplotypeScore=103.2577;InbreedingCoeff=0.7569;MQ=54.19;MQ0=24;MQRankSum=-8.766;QD=21.94;ReadPosRankSum=-0.818;VQSLOD=1.6043;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,1:52:99:0,148,2960	0/0:10,0:10:27.09:0,27,548	0/0:33,0:8:14.68:0,15,275	0/0:57,0:19:34.83:0,35,712	0/0:21,0:21:54.17:0,54,1027	0/0:23,1:21:21.29:0,21,1139	0/0:41,0:39:99:0,114,2255	0/1:9,2:10:99:191,0,153	0/0:34,0:32:90.30:0,90,1771	0/0:32,0:32:96.32:0,96,1912	0/0:20,0:18:48.16:0,48,947	0/0:33,0:29:61.30:0,61,1511	0/0:32,0:32:87.28:0,87,1638	0/0:28,0:28:84.25:0,84,1605	0/0:27,1:26:72.25:0,72,1443	0/0:27,0:27:75.26:0,75,1523	0/0:31,0:31:41.81:0,42,1691	0/0:21,0:21:51.14:0,51,988	1/1:2,1:2:3.01:49,3,0	1/1:4,5:9:24.05:327,24,0	1/1:3,1:5:2.68:11,3,0	0/0:31,0:31:90.29:0,90,1750	0/0:18,0:18:51.17:0,51,1015	0/0:52,0:51:99:0,108,2763	0/0:19,0:19:54.17:0,54,1061	0/0:31,0:31:93.32:0,93,1874	1/1:8,10:17:41.63:577,42,0	0/0:10,0:10:30.10:0,30,604
chr10	108033714	.	C	CT	922.95	PASS	AB=0.684;AC=9;AF=0.161;AN=56;BaseQRankSum=9.693;DP=742;FS=56.723;HRun=2;HaplotypeScore=92.3531;InbreedingCoeff=0.7589;MQ=54.09;MQ0=26;MQRankSum=-8.999;QD=18.84;ReadPosRankSum=-1.014;VQSLOD=-0.0650;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:55:99:0,150,2041	0/0:11,0:11:27.09:0,27,372	0/0:35,0:7:14.42:0,14,184	0/0:58,0:19:37.82:0,38,501	0/0:22,0:22:57.09:0,57,727	0/0:22,0:20:56.44:0,56,780	0/0:44,0:41:99:0,117,1566	0/1:7,6:11:87.56:243,0,88	0/0:33,0:31:87.29:0,87,1210	0/0:32,0:32:93.31:0,93,1300	0/0:21,0:19:48.16:0,48,662	0/0:32,0:28:61.29:0,61,1033	0/0:31,0:30:81.24:0,81,1091	0/0:27,0:27:81.25:0,81,1112	0/0:28,0:26:69.23:0,69,964	0/0:27,0:27:75.25:0,75,1048	0/0:31,0:31:63.21:0,63,1184	0/0:20,1:21:51.14:0,51,687	1/1:4,0:2:2.90:16,3,0	1/1:7,2:9:22.67:267,23,0	1/1:3,1:5:3.01:48,3,0	0/0:31,0:31:87.26:0,87,1181	0/0:17,0:17:48.16:0,48,671	0/0:52,0:51:99:0,129,1883	0/0:19,0:19:51.16:0,51,696	0/0:32,0:32:93.31:0,93,1295	1/1:18,0:17:39.97:496,40,0	0/0:10,0:10:30.10:0,30,419
chr10	108035805	.	T	TCGGG	4597.31	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.703;DP=461;FS=9.325;HRun=0;HaplotypeScore=84.4682;InbreedingCoeff=0.9762;MQ=81.29;MQ0=0;MQRankSum=-10.907;QD=63.85;ReadPosRankSum=-2.544;VQSLOD=5.5723;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.16:0,48,1007	0/0:5,0:5:12.04:0,12,252	0/0:13,0:13:29.61:0,30,612	0/0:15,0:15:39.13:0,39,728	0/0:5,0:5:15.05:0,15,313	0/0:19,0:19:54.17:0,54,1091	0/0:33,0:33:99:0,99,2037	1/1:2,13:17:45.13:1175,45,0	0/0:19,0:19:54.18:0,54,1103	0/0:12,0:12:36.12:0,36,755	0/0:7,0:7:15.05:0,15,315	0/0:26,0:26:78.27:0,78,1635	0/0:12,0:12:36.11:0,36,715	0/0:23,0:23:69.22:0,69,1409	0/0:20,0:20:60.19:0,60,1206	0/0:18,0:18:54.19:0,54,1121	0/0:30,0:30:90.29:0,90,1849	0/0:35,0:35:99:0,102,2057	1/1:4,9:14:36.12:956,36,0	1/1:0,5:5:15.01:364,15,0	1/1:3,14:18:27.09:731,27,0	0/0:8,0:8:21.07:0,21,425	0/0:5,0:5:15.05:0,15,314	0/0:29,0:29:87.30:0,87,1811	0/0:11,0:11:27.07:0,27,526	0/0:20,0:20:60.07:0,60,1211	1/1:1,15:17:48.16:1371,48,0	0/0:8,0:8:24.08:0,24,482
chr10	108037202	.	T	TTG	2142.71	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.061;DP=582;FS=26.088;HRun=0;HaplotypeScore=96.3694;InbreedingCoeff=0.9649;MQ=69.63;MQ0=4;MQRankSum=-10.831;QD=27.83;ReadPosRankSum=-4.532;VQSLOD=1.6142;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.22:0,87,1256	0/0:2,0:2:6.01:0,6,55	0/0:26,0:17:39.68:0,40,653	0/0:31,0:25:69.15:0,69,985	0/0:25,0:25:72.24:0,72,1102	0/0:19,0:19:54.18:0,54,825	0/0:25,0:25:69.22:0,69,1032	1/1:16,2:16:42.10:612,42,0	0/0:17,0:17:48.15:0,48,716	0/0:35,0:34:78.22:0,78,1157	0/0:17,0:17:45.14:0,45,669	0/0:6,0:6:18.03:0,18,202	0/0:20,0:20:51.15:0,51,756	0/0:23,0:23:69.20:0,69,989	0/0:14,0:14:42.14:0,42,641	0/0:15,0:15:42.13:0,42,620	0/0:50,0:50:99:0,138,2082	0/0:32,0:32:90.27:0,90,1352	1/1:22,4:21:58.21:623,58,0	1/1:4,1:5:13.28:143,13,0	1/1:14,2:16:33.07:452,33,0	0/0:15,0:15:45.15:0,45,687	0/0:5,0:5:15.05:0,15,230	0/0:22,0:22:63.10:0,63,937	0/0:30,0:29:90.29:0,90,1355	0/0:30,0:30:84.14:0,84,1234	1/1:9,3:12:36.12:486,36,0	0/0:15,0:15:36.12:0,36,549
chr10	108037203	.	TTTGTTG	T	547.34	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=7.454;DP=577;FS=21.470;HRun=0;HaplotypeScore=143.0736;InbreedingCoeff=0.3718;MQ=69.02;MQ0=4;MQRankSum=-6.930;QD=8.17;ReadPosRankSum=-0.504;VQSLOD=0.8849;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:57.12:0,57,1701	1/1:0,2:2:6.02:126,6,0	0/0:26,0:17:15.04:0,15,401	0/0:30,0:24:24.95:0,25,436	0/0:25,0:25:54.12:0,54,1558	0/0:19,0:19:36.09:0,36,941	0/0:23,0:23:30.10:0,30,1333	0/0:17,0:15:2.94:0,3,18	0/0:17,0:17:33.08:0,33,924	0/0:35,0:34:78.18:0,78,2015	0/0:16,0:16:36.08:0,36,935	1/1:2,4:6:12.04:252,12,0	0/0:20,0:20:54.13:0,54,1458	0/0:23,0:23:54.15:0,54,1577	0/0:14,0:14:33.11:0,33,1027	0/0:15,0:15:24.05:0,24,619	0/0:49,0:49:99:0,106,3397	0/0:32,0:32:87.30:0,87,2550	0/1:26,0:21:49.79:104,0,50	0/1:5,0:5:7.90:47,0,8	0/1:16,0:16:12.61:21,0,13	0/0:15,0:15:33.06:0,33,836	0/0:7,0:7:15.02:0,15,337	0/0:23,0:23:51.13:0,51,1402	0/0:30,0:29:69.24:0,69,2257	0/0:29,0:29:63.15:0,63,1776	0/1:12,0:12:34.54:136,0,35	0/0:14,0:14:36.12:0,36,1181
chr10	108037205	.	TG	T	1344.20	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.417;DP=569;FS=40.124;HRun=1;HaplotypeScore=84.7290;InbreedingCoeff=0.9235;MQ=66.68;MQ0=4;MQRankSum=-10.915;QD=18.16;ReadPosRankSum=-2.498;VQSLOD=1.1759;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:82.15:0,82,1148	1/1:2,0:2:0.94:2,1,0	0/0:25,0:16:38.54:0,39,533	0/0:30,0:24:69.15:0,69,860	0/0:25,0:25:72.24:0,72,1024	0/0:19,0:19:57.15:0,57,758	0/0:23,0:23:69.21:0,69,944	1/1:6,10:14:30.37:298,30,0	0/0:16,0:16:45.15:0,45,636	0/0:34,0:33:96.12:0,96,1229	0/0:17,0:17:48.14:0,48,655	0/0:6,0:6:3.80:0,4,70	0/0:20,0:20:57.16:0,57,780	0/0:21,0:21:63.20:0,63,880	0/0:14,0:14:42.13:0,42,593	0/0:14,0:14:39.11:0,39,525	0/0:49,0:49:99:0,141,1977	0/0:32,0:32:92.02:0,92,1325	1/1:6,19:20:53.54:471,54,0	1/1:1,4:5:11.93:105,12,0	1/1:2,12:14:26.90:269,27,0	0/0:15,0:15:45.13:0,45,629	0/0:8,0:8:23.96:0,24,270	0/0:22,0:22:63.18:0,63,871	0/0:31,0:30:93.28:0,93,1298	0/0:29,0:29:75.57:0,76,1137	1/1:3,9:12:35.96:372,36,0	0/0:14,0:14:36.12:0,36,538
chr10	108037230	.	GTTATTGTTGTT	G	2125.11	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.736;DP=497;FS=47.070;HRun=0;HaplotypeScore=172.8856;InbreedingCoeff=0.9206;MQ=55.28;MQ0=3;MQRankSum=-8.338;QD=47.22;ReadPosRankSum=-1.317;VQSLOD=1.5018;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:26.18:0,26,3217	0/0:2,0:2:6.02:0,6,91	0/0:20,0:14:39.10:0,39,987	0/0:18,0:12:30.31:0,30,900	0/0:24,0:24:66.23:0,66,2888	0/0:16,0:16:48.10:0,48,1884	0/0:18,0:18:48.15:0,48,2239	1/1:11,0:10:27.09:548,27,0	0/0:15,0:15:42.14:0,42,1829	0/0:29,0:29:87.13:0,87,4033	0/0:15,0:15:44.88:0,45,1756	0/0:6,0:6:18.06:0,18,348	0/0:19,0:19:54.19:0,54,2624	0/0:19,0:19:57.20:0,57,2916	0/0:12,0:12:36.11:0,36,1716	0/0:13,0:13:36.12:0,36,1358	0/0:45,0:45:99:0,115,5739	0/0:34,0:34:99:0,102,4394	1/1:9,6:14:26.73:731,27,0	1/1:2,3:5:12.04:306,12,0	1/1:3,1:4:3.01:98,3,0	0/0:10,0:10:24.08:0,24,1170	0/0:7,0:7:21.07:0,21,906	0/0:21,0:21:54.18:0,54,2383	0/0:32,0:32:90.14:0,90,4486	0/0:34,0:34:99:0,99,3700	1/1:4,6:10:18.06:605,18,0	0/0:14,0:14:36.12:0,36,2074
chr10	108037239	.	GTT	G	965.36	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.317;DP=472;FS=49.792;HRun=4;HaplotypeScore=79.6669;InbreedingCoeff=0.9215;MQ=54.20;MQ0=2;MQRankSum=-8.847;QD=26.82;ReadPosRankSum=-0.243;VQSLOD=-0.1401;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:43.43:0,43,1379	0/0:2,0:2:6.02:0,6,69	0/0:20,0:13:35.95:0,36,598	0/0:16,0:12:33.01:0,33,523	0/0:23,0:23:66.22:0,66,1187	0/0:16,0:16:48.12:0,48,790	0/0:15,0:15:42.14:0,42,750	1/1:7,5:12:33.11:466,33,0	0/0:16,0:16:45.11:0,45,806	0/0:30,0:30:84.27:0,84,1499	0/0:14,0:14:42.14:0,42,776	0/0:7,0:7:21.03:0,21,268	0/0:19,0:19:54.18:0,54,967	0/0:20,0:20:57.20:0,57,1053	0/0:12,0:12:33.10:0,33,589	0/0:13,0:13:36.12:0,36,660	0/0:42,0:42:99:0,111,1997	0/0:31,0:31:84.24:0,84,1503	1/1:6,6:11:29.74:336,30,0	1/1:3,1:4:12.02:133,12,0	1/1:1,1:2:3:26,3,0	0/0:8,0:8:21.05:0,21,333	0/0:8,0:8:21.07:0,21,365	0/0:17,0:17:48.16:0,48,869	0/0:33,0:33:93.32:0,93,1733	0/0:30,0:30:87.30:0,87,1614	1/1:6,0:6:18.02:167,18,0	0/0:13,0:13:36.12:0,36,673
chr10	108037241	.	T	TG	768.89	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.527;DP=470;FS=41.704;HRun=0;HaplotypeScore=71.6396;InbreedingCoeff=0.9144;MQ=54.12;MQ0=2;MQRankSum=-8.779;QD=18.75;ReadPosRankSum=-0.364;VQSLOD=1.6591;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:31:45.37:0,45,1075	0/0:2,0:2:6.02:0,6,83	0/0:18,0:12:36.09:0,36,480	0/0:17,1:13:36.01:0,36,440	0/0:23,0:23:51.66:0,52,849	0/0:16,0:16:48.11:0,48,619	0/0:15,0:15:42.13:0,42,572	1/1:7,9:15:33.11:468,33,0	0/0:16,0:16:45.11:0,45,607	0/0:28,0:28:84.26:0,84,1143	0/0:15,0:15:42.14:0,42,587	0/0:7,0:7:21.04:0,21,271	0/0:19,0:19:54.17:0,54,740	0/0:19,0:19:57.19:0,57,797	0/0:12,0:12:33.10:0,33,446	0/0:13,0:13:36.12:0,36,503	0/0:38,0:38:99:0,112,1512	0/0:29,0:29:84.23:0,84,1135	1/1:13,0:12:29.50:303,30,0	1/1:4,0:4:10.28:100,10,0	1/1:2,0:2:2.22:7,2,0	0/0:7,0:7:21.05:0,21,262	0/0:8,0:8:21.06:0,21,279	0/0:17,0:17:48.16:0,48,664	0/0:32,0:32:93.31:0,93,1298	0/0:33,0:33:93.29:0,93,1269	1/1:6,0:6:14.39:50,14,0	0/0:13,0:13:36.12:0,36,501
chr10	108037257	.	G	GTTTA	194.66	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=6.155;DP=449;FS=1.313;HRun=0;HaplotypeScore=101.5219;InbreedingCoeff=0.4026;MQ=53.64;MQ0=3;MQRankSum=-6.329;QD=4.23;ReadPosRankSum=-3.673;VQSLOD=0.4704;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:53.23:0,53,952	1/1:2,0:2:3.48:53,3,0	0/0:12,0:8:23.94:0,24,342	0/0:15,0:9:20.96:0,21,355	0/0:24,0:24:62.99:0,63,996	0/0:18,0:18:44.74:0,45,789	0/0:12,0:12:27.04:0,27,426	0/1:22,0:17:23.68:24,0,179	0/0:13,0:13:36.11:0,36,605	0/0:28,0:28:72.23:0,72,1265	0/0:14,0:14:39.12:0,39,682	1/1:3,4:7:9.03:217,9,0	0/0:16,0:16:47.22:0,47,724	0/0:18,0:18:54.14:0,54,874	0/0:11,0:11:33.11:0,33,566	0/0:13,0:13:36.12:0,36,663	0/0:40,0:40:99:0,102,1720	0/0:31,0:31:93.23:0,93,1554	0/0:15,0:14:13.96:0,14,167	0/1:6,0:6:9.70:10,0,39	./.	0/0:3,0:3:9:0,9,97	0/0:6,0:6:18.06:0,18,324	0/0:17,0:17:41.61:0,42,631	0/0:30,0:30:80.81:0,81,1348	0/0:29,0:29:81.28:0,81,1479	0/1:9,0:9:16.02:16,0,123	0/0:11,0:11:30.10:0,30,493
chr10	108037453	.	G	GGTTTTTT	2195.14	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-1.247;DP=477;FS=2.062;HRun=0;HaplotypeScore=122.2283;InbreedingCoeff=0.8920;MQ=63.82;MQ0=3;MQRankSum=-6.860;QD=37.85;ReadPosRankSum=-4.659;VQSLOD=2.7872;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:35:86.35:0,86,1580	0/0:1,0:1:2.99:0,3,24	0/0:15,0:11:19.44:0,19,307	0/0:24,0:14:29.82:0,30,288	0/0:18,0:20:50.64:0,51,919	0/0:15,0:18:44.93:0,45,901	0/0:26,0:26:59.37:0,59,1163	1/1:1,12:18:51.09:938,51,0	0/0:13,0:13:31.72:0,32,616	0/0:14,0:14:34.33:0,34,727	0/0:10,0:12:28.69:0,29,616	0/0:12,0:13:23.62:0,24,435	0/0:18,0:18:44.92:0,45,864	0/0:11,0:13:35.98:0,36,778	0/0:27,0:28:52.30:0,52,1342	0/0:14,0:15:42.13:0,42,994	0/0:35,0:37:83.28:0,83,1862	0/0:19,0:20:16.17:0,16,1035	1/1:19,0:13:38.93:609,39,0	1/1:0,3:5:12.04:388,12,0	1/1:0,4:7:6.02:210,6,0	0/0:5,0:5:11.86:0,12,235	0/0:6,0:7:21.07:0,21,499	0/0:28,0:27:52.98:0,53,1246	0/0:14,0:13:38.14:0,38,672	0/0:20,0:23:55.11:0,55,1167	1/1:0,5:8:6.49:212,6,0	0/0:17,0:17:32.50:0,32,694
chr10	108037716	.	GGT	G	942.70	PASS	AB=0.913;AC=11;AF=0.196;AN=56;BaseQRankSum=10.741;DP=654;FS=1.136;HRun=0;HaplotypeScore=93.7430;InbreedingCoeff=0.8245;MQ=63.63;MQ0=16;MQRankSum=-5.587;QD=6.93;ReadPosRankSum=0.344;VQSLOD=3.2536;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,2:34:37.72:0,38,1120	0/0:9,0:9:12.03:0,12,161	0/0:38,1:25:13.59:0,14,622	0/0:35,0:18:20.96:0,21,252	0/0:26,0:26:54.15:0,54,838	0/0:20,1:21:16.66:0,17,773	0/0:27,0:27:60.19:0,60,960	1/1:34,0:34:53.50:583,54,0	0/0:19,1:20:16.68:0,17,795	0/0:20,1:21:13.66:0,14,745	0/0:20,0:20:42.14:0,42,688	0/0:20,0:21:47.57:0,48,641	0/0:20,0:20:57.16:0,57,859	0/0:36,0:36:90.29:0,90,1437	0/0:18,0:18:51.17:0,51,838	0/0:11,0:11:30.09:0,30,470	0/0:28,0:28:69.24:0,69,1127	0/0:29,3:32:9.21:0,9,1163	1/1:25,0:23:34.34:269,34,0	1/1:13,0:9:6.30:34,6,0	1/1:24,1:23:11.78:89,12,0	0/0:13,0:13:27.07:0,27,401	0/0:13,0:13:24.08:0,24,386	0/0:24,1:24:31.72:0,32,1046	0/0:14,0:14:27.09:0,27,442	0/0:35,0:35:87.29:0,87,1409	1/1:18,0:18:20.47:120,20,0	0/1:19,2:21:17.81:18,0,727
chr10	108037720	.	TGTGTGTGTGTGC	T	3575.93	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.565;DP=671;FS=4.047;HRun=0;HaplotypeScore=210.3907;InbreedingCoeff=0.9734;MQ=62.37;MQ0=17;MQRankSum=-4.708;QD=30.83;ReadPosRankSum=-1.291;VQSLOD=3.0759;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:78.27:0,78,4140	0/0:8,0:8:12.03:0,12,444	0/0:45,0:27:63.16:0,63,2054	0/0:38,0:20:42.94:0,43,1345	0/0:23,0:23:57.18:0,57,2979	0/0:21,0:21:54.17:0,54,2481	0/0:27,0:27:63.22:0,63,3505	1/1:6,28:34:74.34:1159,74,0	0/0:20,0:20:54.19:0,54,2677	0/0:23,0:21:60.21:0,60,3202	0/0:19,0:19:42.14:0,42,2262	0/0:22,0:22:51.11:0,51,2158	0/0:23,0:23:66.22:0,66,2918	0/0:35,0:35:90.31:0,90,4750	0/0:20,0:20:57.20:0,57,2985	0/0:10,0:10:30.10:0,30,1802	0/0:30,0:30:75.26:0,75,3960	0/0:32,0:32:90.31:0,90,4056	1/1:9,15:22:43.88:977,44,0	1/1:1,11:8:9.03:302,9,0	1/1:6,20:24:14.84:377,15,0	0/0:13,0:13:27.09:0,27,1276	0/0:13,0:13:27.09:0,27,1441	0/0:27,0:26:78.27:0,78,4051	0/0:13,0:13:27.09:0,27,1359	0/0:37,0:37:93.32:0,93,4615	1/1:1,19:20:21.07:761,21,0	0/0:22,0:22:60.17:0,60,2977
chr10	108039418	.	CA	C	846.58	PASS	AB=0.857;AC=29;AF=0.906;AN=32;BaseQRankSum=-3.450;DP=42;FS=4.946;HRun=1;HaplotypeScore=17.4483;InbreedingCoeff=0.0744;MQ=88.74;MQ0=0;MQRankSum=-2.615;QD=25.65;ReadPosRankSum=-1.725;VQSLOD=2.7842;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:6.02:83,6,0	./.	0/0:7,0:4:9.03:0,9,140	0/1:5,1:5:50.62:51,0,59	1/1:0,2:2:3:42,3,0	./.	./.	1/1:0,1:1:3.01:42,3,0	1/1:0,1:1:3.01:42,3,0	1/1:0,1:1:3.01:42,3,0	./.	./.	1/1:0,2:2:3.01:36,3,0	1/1:0,2:2:6.02:78,6,0	1/1:0,4:4:12.04:156,12,0	./.	1/1:0,4:4:9.03:120,9,0	1/1:0,2:2:3.01:42,3,0	./.	1/1:0,1:1:3.01:42,3,0	1/1:0,2:2:3.01:42,3,0	./.	1/1:0,2:2:6.02:84,6,0	./.	./.	./.	1/1:0,1:1:3.01:42,3,0	./.
chr10	108039556	.	TGGGCAAGCCCCAGCACG	T	4442.01	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.364;DP=357;FS=3.943;HRun=0;HaplotypeScore=162.8083;InbreedingCoeff=0.8955;MQ=82.11;MQ0=0;MQRankSum=-7.216;QD=94.51;ReadPosRankSum=2.303;VQSLOD=4.7757;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.26:0,78,6182	0/0:5,0:5:15.05:0,15,1040	0/0:13,0:13:27.09:0,27,1256	0/0:11,0:11:29.97:0,30,1245	0/0:5,0:5:15.05:0,15,1072	0/0:6,0:6:18.06:0,18,1394	0/0:21,0:21:63.22:0,63,4897	1/1:1,7:8:18.04:540,18,0	0/0:14,0:14:42.13:0,42,3286	0/0:17,0:17:48.16:0,48,3788	0/0:2,0:2:3.01:0,3,251	0/0:17,0:17:51.18:0,51,3856	0/0:8,0:8:24.08:0,24,1963	0/0:16,0:16:45.15:0,45,3569	0/0:23,0:23:66.20:0,66,4902	0/0:4,0:4:12.04:0,12,971	0/0:24,0:24:72.20:0,72,5379	0/0:31,0:31:90.31:0,90,6884	1/1:2,10:12:30.10:1369,30,0	1/1:0,5:5:15.05:744,15,0	1/1:0,15:15:15.94:746,16,0	0/0:13,0:13:39.12:0,39,2941	0/0:8,0:8:18.06:0,18,1437	0/0:21,0:21:60.21:0,60,4535	0/0:11,0:11:24.08:0,24,1844	0/0:12,0:12:36.12:0,36,2738	1/1:0,7:7:21.07:1042,21,0	0/0:1,0:1:3.01:0,3,251
chr10	108040553	.	A	ATG	2979.75	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=7.454;DP=1114;FS=109.510;HRun=0;HaplotypeScore=193.3613;InbreedingCoeff=0.8736;MQ=52.44;MQ0=31;MQRankSum=-0.965;QD=12.16;ReadPosRankSum=-1.551;VQSLOD=0.4650;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:42.47:0,42,622	1/1:6,6:12:15.05:244,15,0	0/1:11,0:10:8.62:9,0,32	0/0:16,0:13:5.50:0,6,35	0/0:37,0:37:80.98:0,81,990	0/0:25,0:26:60.19:0,60,761	0/0:28,0:26:39.07:0,39,668	1/1:48,7:31:35.67:512,36,0	0/0:56,0:56:99:0,150,1864	0/0:82,0:75:99:0,193,2467	0/0:25,0:25:59.59:0,60,743	1/1:15,12:28:24.06:375,24,0	0/0:50,0:49:99:0,120,1466	0/0:48,0:48:99:0,126,1602	0/0:67,0:67:99:0,165,2027	0/0:73,0:73:99:0,153,1920	0/0:28,0:28:54:0,54,657	0/0:31,0:31:48.37:0,48,861	1/1:20,1:10:5.69:61,6,0	1/1:14,22:32:14.79:246,15,0	1/1:36,18:42:60:932,60,0	0/0:53,0:52:99:0,117,1474	0/0:35,0:35:68.73:0,69,997	0/0:45,0:45:84.27:0,84,1066	0/0:43,0:43:98.69:0,99,1244	0/0:59,0:55:99:0,141,1781	1/1:11,14:25:51.13:795,51,0	0/0:27,0:27:72.23:0,72,914
chr10	108040559	.	G	GTA	1276.40	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=12.620;DP=1108;FS=124.663;HRun=0;HaplotypeScore=197.5343;InbreedingCoeff=0.6019;MQ=51.94;MQ0=36;MQRankSum=-3.493;QD=5.55;ReadPosRankSum=-1.168;VQSLOD=-0.2459;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:51.94:0,52,838	1/1:12,0:11:15.01:138,15,0	0/0:10,0:6:16.13:0,16,131	0/0:12,0:8:14.13:0,14,140	0/0:34,0:34:81.27:0,81,1226	0/0:22,1:23:63.20:0,63,941	0/0:33,0:29:53.57:0,54,860	0/1:57,0:29:99:198,0,155	0/0:63,0:63:99:0,168,2432	0/0:84,0:75:99:0,208,3131	0/0:25,0:25:66.19:0,66,963	0/1:27,0:27:0.01:159,0,0	0/0:53,1:53:99:0,147,2037	0/0:44,0:44:99:0,126,1925	0/0:72,0:72:99:0,189,2674	0/0:65,0:65:99:0,171,2482	0/0:29,0:29:68.86:0,69,903	0/0:28,1:29:66.63:0,67,1017	0/1:22,0:9:8.21:8,0,107	1/1:36,0:32:14.70:128,15,0	0/1:52,0:39:9.26:387,0,9	0/0:50,0:49:99:0,126,1861	0/0:33,0:33:87.23:0,87,1282	0/0:44,1:45:99:0,99,1400	0/0:47,0:47:99:0,116,1659	0/0:62,0:58:99:0,171,2422	1/1:24,0:24:28.42:418,28,0	0/0:32,0:32:93.19:0,93,1268
chr10	108040563	.	GTA	G	627.17	PASS	AB=0.910;AC=10;AF=0.179;AN=56;BaseQRankSum=10.304;DP=1128;FS=31.428;HRun=0;HaplotypeScore=203.6958;InbreedingCoeff=0.0591;MQ=51.99;MQ0=36;MQRankSum=-2.645;QD=2.52;ReadPosRankSum=-5.178;VQSLOD=-0.2540;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,2:32:48.58:0,49,1026	0/1:10,3:12:6.27:105,0,6	0/1:13,0:7:16.31:16,0,91	0/1:8,0:4:13.07:13,0,35	0/0:35,0:35:75.15:0,75,1513	0/0:23,0:23:63.21:0,63,1120	0/0:32,1:29:50.85:0,51,1133	0/1:57,3:32:99:102,0,146	0/0:65,0:65:99:0,183,3098	0/0:90,0:81:99:0,237,4059	0/0:27,0:27:72.05:0,72,1193	0/1:22,5:27:13.01:67,0,13	0/0:53,0:52:99:0,150,2450	0/0:49,0:49:99:0,141,2504	0/0:74,1:75:99:0,200,3265	0/0:66,0:66:99:0,172,3144	0/0:26,0:26:29.18:0,29,1008	0/0:32,0:32:82.13:0,82,1453	0/1:18,0:4:21.85:22,0,24	1/1:33,3:32:9.94:96,10,0	0/1:42,9:38:44.34:210,0,44	0/0:50,0:49:99:0,126,2298	0/0:35,0:35:90.26:0,90,1606	0/0:44,0:44:93.28:0,93,1670	0/0:50,0:50:99:0,123,2039	0/0:60,0:56:99:0,163,2913	0/1:18,5:23:56.88:143,0,57	0/0:33,0:33:98.98:0,99,1623
chr10	108040569	.	A	ATG	50.87	PASS	AB=0.995;AC=5;AF=0.089;AN=56;BaseQRankSum=8.017;DP=1124;FS=12.467;HRun=0;HaplotypeScore=213.6443;InbreedingCoeff=0.2151;MQ=51.95;MQ0=31;MQRankSum=-5.814;QD=0.45;ReadPosRankSum=-2.436;VQSLOD=1.4694;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:55.88:0,56,767	1/1:12,0:11:2.92:17,3,0	0/0:13,0:6:8.51:0,9,148	0/0:17,0:5:12.02:0,12,139	0/0:36,0:36:66.22:0,66,877	0/0:19,1:20:39.10:0,39,501	0/0:35,0:31:52.82:0,53,807	0/1:66,1:38:81.54:82,0,175	0/0:63,0:63:99:0,175,2295	0/0:89,0:83:99:0,211,2728	0/0:24,0:24:66.15:0,66,878	0/0:26,0:27:9.02:0,9,110	0/0:53,0:52:99:0,144,1852	0/0:50,0:50:99:0,135,1739	0/0:73,1:74:99:0,177,2288	0/0:69,2:71:99:0,166,2147	0/0:28,0:28:50.56:0,51,857	0/0:34,0:35:82.96:0,83,1008	0/1:15,0:2:1.64:2,0,11	0/0:34,0:31:3.53:0,4,39	0/0:42,0:30:26.96:0,27,322	0/0:47,0:46:99:0,105,1366	0/0:34,0:34:87.22:0,87,1110	0/0:42,0:42:90.27:0,90,1179	0/0:48,0:48:99:0,109,1473	0/0:59,0:58:99:0,160,2115	0/1:19,0:19:52.45:52,0,106	0/0:36,0:36:99:0,108,1381
chr10	108040573	.	G	GTGTA	1664.19	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=6.343;DP=1115;FS=14.227;HRun=0;HaplotypeScore=240.6663;InbreedingCoeff=0.8703;MQ=51.92;MQ0=29;MQRankSum=-6.293;QD=7.96;ReadPosRankSum=-4.402;VQSLOD=0.9423;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:50.31:0,50,744	1/1:10,2:11:2.31:73,2,0	0/0:19,0:8:17.57:0,18,194	0/0:18,0:5:11.99:0,12,145	0/0:30,0:30:60.19:0,60,980	0/0:17,0:17:30.10:0,30,499	0/0:35,0:31:60.03:0,60,909	1/1:66,0:39:40.95:1018,41,0	0/0:66,0:66:99:0,166,2692	0/0:88,0:83:99:0,182,3116	0/0:24,0:24:63.22:0,63,1051	1/1:24,0:25:2.35:24,2,0	0/0:51,0:50:99:0,117,1932	0/0:52,0:52:99:0,126,1972	0/0:72,0:72:99:0,159,2523	0/0:73,0:73:99:0,144,2336	0/0:28,0:28:54.93:0,55,938	0/0:37,0:37:55.26:0,55,857	1/1:15,0:4:12:152,12,0	1/1:14,17:29:5.99:75,6,0	1/1:37,3:28:5.97:48,6,0	0/0:48,0:47:93.11:0,93,1434	0/0:33,0:33:77.93:0,78,1302	0/0:41,0:41:72.21:0,72,1140	0/0:46,0:46:84.99:0,85,1644	0/0:58,0:57:99:0,141,2374	1/1:13,7:20:20.59:447,21,0	0/0:36,0:36:93.30:0,93,1513
chr10	108040585	.	ATGTG	A	52.46	PASS	AB=0.985;AC=7;AF=0.125;AN=56;BaseQRankSum=6.944;DP=1134;FS=13.014;HRun=0;HaplotypeScore=264.9158;InbreedingCoeff=0.3798;MQ=51.45;MQ0=21;MQRankSum=-5.468;QD=0.42;ReadPosRankSum=-5.411;VQSLOD=-0.2343;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:60.02:0,60,1265	0/0:10,0:9:2.76:0,3,47	0/0:28,0:12:32.80:0,33,568	0/0:29,0:8:10.31:0,10,320	0/0:27,0:27:72.15:0,72,1696	0/0:19,0:19:45.10:0,45,910	0/0:36,0:32:75.04:0,75,1716	0/0:63,0:45:44.39:0,44,1034	0/0:66,0:66:99:0,193,4563	0/0:90,0:86:99:0,237,5284	0/0:24,0:24:66.21:0,66,1665	0/1:20,1:21:9.79:20,0,10	0/0:50,0:49:99:0,132,3145	0/0:54,0:54:99:0,153,3504	0/0:72,0:72:99:0,176,4313	0/0:68,0:68:99:0,175,4153	0/0:28,0:28:65.53:0,66,1530	0/0:32,0:32:75.75:0,76,1593	0/1:20,0:9:33.26:33,0,180	1/1:38,2:39:4.01:49,4,0	1/1:23,2:18:5.99:49,6,0	0/0:42,0:42:99:0,105,2446	0/0:35,0:35:90.21:0,90,2174	0/0:43,0:43:87.18:0,87,1882	0/0:52,0:52:99:0,127,2760	0/0:64,0:64:99:0,178,4094	0/1:19,0:19:27.39:27,0,183	0/0:36,0:36:99:0,102,2444
chr10	108040614	.	G	GTGTGTGTA	1771.03	PASS	AC=8;AF=0.160;AN=50;BaseQRankSum=6.588;DP=1187;FS=9.449;HRun=0;HaplotypeScore=318.8243;InbreedingCoeff=0.9641;MQ=52.16;MQ0=17;MQRankSum=-8.002;QD=19.46;ReadPosRankSum=-5.230;VQSLOD=0.9653;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:42.87:0,43,1335	1/1:8,0:10:5.91:104,6,0	0/0:59,0:17:45.09:0,45,792	0/0:63,0:18:51.10:0,51,1019	0/0:29,0:29:78.22:0,78,1990	0/0:30,0:30:72.20:0,72,1965	0/0:33,0:32:69.21:0,69,1743	1/1:47,0:38:63.08:1092,63,0	0/0:66,0:66:99:0,177,4473	0/0:84,0:83:99:0,200,5969	0/0:28,0:28:72.18:0,72,1610	./.	0/0:53,0:52:99:0,144,3777	0/0:59,0:59:99:0,171,4300	0/0:80,0:80:99:0,189,5130	0/0:78,0:79:99:0,189,5520	0/0:30,0:30:74.77:0,75,1959	0/0:32,0:32:60.90:0,61,1740	1/1:19,0:10:17.94:281,18,0	./.	./.	0/0:54,0:53:99:0,144,3521	0/0:42,0:42:99:0,107,2927	0/0:37,0:37:72.23:0,72,1972	0/0:42,0:42:98.54:0,99,2702	0/0:63,0:63:99:0,178,4722	1/1:14,0:14:18.01:443,18,0	0/0:30,0:30:90.31:0,90,2543
chr10	108040616	.	GTA	G	546.79	PASS	AB=0.667;AC=7;AF=0.140;AN=50;BaseQRankSum=8.491;DP=1189;FS=10.462;HRun=0;HaplotypeScore=203.8897;InbreedingCoeff=0.8162;MQ=52.18;MQ0=13;MQRankSum=-6.482;QD=6.36;ReadPosRankSum=-3.334;VQSLOD=1.8867;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:43.61:0,44,958	1/1:9,1:10:2.60:10,3,0	0/0:55,0:16:45:0,45,722	0/0:60,0:19:56.95:0,57,859	0/0:31,0:31:78.24:0,78,1427	0/0:30,1:31:75.24:0,75,1400	0/0:33,0:32:68.77:0,69,1288	1/1:42,4:35:33.95:459,34,0	0/0:65,0:65:99:0,183,3372	0/0:86,0:84:99:0,209,4251	0/0:29,0:29:78.22:0,78,1374	./.	0/0:52,1:52:99:0,147,2734	0/0:59,1:60:99:0,175,3266	0/0:83,0:83:99:0,218,3945	0/0:82,0:82:99:0,211,3952	0/0:29,1:30:73.92:0,74,1390	0/0:31,1:32:37.67:0,38,1287	1/1:15,1:8:12.41:111,12,0	./.	./.	0/0:55,0:54:99:0,144,2673	0/0:44,0:44:99:0,126,2244	0/0:36,1:37:78.23:0,78,1425	0/0:43,0:43:99:0,111,1974	0/0:63,0:63:99:0,178,3365	0/1:7,7:14:3.52:97,0,4	0/0:30,0:30:90.31:0,90,1736
chr10	108040620	.	GTA	G	430.98	PASS	AC=8;AF=0.160;AN=50;BaseQRankSum=8.427;DP=1204;FS=10.050;HRun=0;HaplotypeScore=204.3794;InbreedingCoeff=0.8104;MQ=52.03;MQ0=11;MQRankSum=-6.851;QD=5.39;ReadPosRankSum=-2.919;VQSLOD=1.7263;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:50.92:0,51,869	1/1:9,0:9:2.19:7,2,0	0/0:51,1:14:28.26:0,28,464	0/0:55,0:18:48.07:0,48,683	0/0:31,0:31:72.19:0,72,1253	0/0:34,1:35:87.30:0,87,1581	0/0:36,0:34:68.74:0,69,1155	1/1:41,0:29:27.04:383,27,0	0/0:66,0:66:99:0,177,3059	0/0:90,0:88:99:0,226,3951	0/0:29,0:29:81.22:0,81,1330	./.	0/0:54,0:53:99:0,141,2534	0/0:60,0:60:99:0,171,2847	0/0:86,0:86:99:0,221,3731	0/0:85,0:85:99:0,216,3789	0/0:29,0:29:72.28:0,72,1344	0/0:35,2:37:36.02:0,36,1304	1/1:16,0:7:4.45:68,4,0	./.	./.	0/0:52,0:51:99:0,135,2357	0/0:44,0:44:99:0,126,2197	0/0:35,2:37:75.26:0,75,1358	0/0:46,0:46:99:0,111,1913	0/0:63,0:63:99:0,180,3224	1/1:13,1:14:0.09:95,0,0	0/0:30,0:30:90.31:0,90,1636
chr10	108040622	.	ATATGTG	A	1057.79	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=8.261;DP=1208;FS=16.078;HRun=0;HaplotypeScore=276.1926;InbreedingCoeff=0.8916;MQ=52.16;MQ0=11;MQRankSum=-7.014;QD=13.06;ReadPosRankSum=-3.007;VQSLOD=1.1853;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:51.11:0,51,1680	1/1:6,3:9:3.48:59,3,0	0/0:44,0:11:30.10:0,30,781	0/0:53,0:17:43.08:0,43,1060	0/0:32,0:32:81.23:0,81,2487	0/0:35,0:35:87.30:0,87,2797	0/0:36,0:34:69.15:0,69,2147	1/1:37,3:28:42.09:677,42,0	0/0:64,0:64:99:0,178,5721	0/0:91,0:88:99:0,242,7492	0/0:30,0:30:84.23:0,84,2203	./.	0/0:52,0:51:99:0,141,4869	0/0:62,0:62:99:0,178,5389	0/0:87,0:87:99:0,229,6993	0/0:89,0:89:99:0,225,7224	0/0:30,0:30:83.36:0,83,2578	0/0:37,0:37:70.10:0,70,2453	1/1:14,2:8:9.03:162,9,0	0/0:25,15:39:0:0,0,0	./.	0/0:51,0:50:99:0,138,4473	0/0:45,0:45:99:0,129,4007	0/0:40,0:40:84.25:0,84,2634	0/0:45,0:45:99:0,114,3599	0/0:63,0:63:99:0,184,6126	1/1:13,3:16:17.51:302,18,0	0/0:31,0:31:93.32:0,93,3228
chr10	108040646	.	G	GTA	109.98	PASS	AB=0.924;AC=4;AF=0.074;AN=54;BaseQRankSum=7.391;DP=1235;FS=15.230;HRun=0;HaplotypeScore=218.3165;InbreedingCoeff=0.1977;MQ=51.04;MQ0=26;MQRankSum=-7.166;QD=1.13;ReadPosRankSum=1.391;VQSLOD=1.2739;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:54.16:0,54,798	0/1:14,0:14:2.58:3,0,8	0/0:17,0:3:9.03:0,9,127	0/0:20,0:6:18.03:0,18,222	0/0:35,0:35:87.30:0,87,1330	0/0:35,0:35:81.16:0,81,1216	0/0:44,0:40:74.93:0,75,1091	0/1:43,0:19:14.43:14,0,179	0/0:59,0:59:99:0,159,2385	0/0:105,0:98:99:0,244,3632	0/0:26,0:25:66.21:0,66,977	0/0:32,0:32:0:0,0,0	0/0:64,0:63:99:0,162,2439	0/0:59,0:59:99:0,163,2434	0/0:96,0:96:99:0,247,3717	0/0:89,0:89:99:0,210,3162	0/0:36,0:36:86.36:0,86,1304	0/0:43,0:42:69.56:0,70,1533	0/1:22,1:7:12.63:97,0,13	0/0:34,6:39:0.47:0,0,1	./.	0/0:55,0:55:99:0,141,2087	0/0:50,0:49:99:0,135,1975	0/0:40,0:40:84.29:0,84,1281	0/0:44,0:45:99:0,112,1698	0/0:63,0:63:99:0,181,2691	0/1:11,6:17:10.81:95,0,11	0/0:36,0:36:99:0,105,1580
chr10	108040648	.	GTA	G	636.11	PASS	AB=0.854;AC=10;AF=0.185;AN=54;BaseQRankSum=9.358;DP=1250;FS=19.824;HRun=0;HaplotypeScore=212.9103;InbreedingCoeff=0.7568;MQ=50.87;MQ0=26;MQRankSum=-9.222;QD=3.72;ReadPosRankSum=-1.769;VQSLOD=1.1493;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:51.14:0,51,901	0/1:11,2:13:11.38:11,0,50	0/0:17,0:3:8.90:0,9,96	0/0:17,0:5:11.80:0,12,122	0/0:35,0:35:74.28:0,74,1573	0/0:34,0:34:81.14:0,81,1516	0/0:41,1:38:74.73:0,75,1261	1/1:41,6:21:11.33:366,11,0	0/0:61,0:61:99:0,168,2879	0/0:106,0:99:99:0,252,4519	0/0:27,0:26:66.21:0,66,1241	0/1:26,6:32:0.03:0,0,0	0/0:66,0:65:99:0,171,2887	0/0:60,0:60:99:0,166,3083	0/0:97,0:97:99:0,247,4443	0/0:91,0:91:99:0,219,3925	0/0:36,0:36:89.71:0,90,1514	0/0:45,0:44:99:0,108,1934	1/1:19,4:8:16.21:206,16,0	1/1:38,1:38:1.73:5,2,0	./.	0/0:56,0:56:99:0,150,2627	0/0:51,0:49:99:0,129,2424	0/0:40,0:40:87.25:0,87,1559	0/0:43,2:45:99:0,102,2012	0/0:64,0:63:99:0,178,3199	1/1:14,3:17:23.28:191,23,0	0/0:37,0:37:99:0,111,1941
chr10	108040650	.	ATG	A	586.73	PASS	AB=0.978;AC=8;AF=0.148;AN=54;BaseQRankSum=8.760;DP=1245;FS=12.531;HRun=0;HaplotypeScore=212.6131;InbreedingCoeff=0.6745;MQ=50.97;MQ0=25;MQRankSum=-8.668;QD=3.62;ReadPosRankSum=-1.506;VQSLOD=1.3572;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:45.13:0,45,742	0/0:14,0:14:1.44:0,1,40	0/0:10,3:3:5.99:0,6,74	0/0:14,0:4:6.02:0,6,91	0/0:35,1:36:50.43:0,50,1407	0/0:35,0:35:81.14:0,81,1363	0/0:42,0:38:62.80:0,63,1026	1/1:41,9:22:17.57:374,18,0	0/0:62,0:62:99:0,159,2533	0/0:104,0:98:99:0,247,4074	0/0:26,0:25:66.23:0,66,1120	0/1:31,0:31:0.03:0,0,0	0/0:66,0:66:99:0,150,2527	0/0:59,0:59:99:0,166,2780	0/0:99,0:99:99:0,235,3846	0/0:90,0:90:99:0,214,3562	0/0:36,0:37:90.04:0,90,1415	0/0:43,0:42:80.88:0,81,1697	0/1:21,1:8:0.03:112,0,0	1/1:18,22:39:1.73:5,2,0	./.	0/0:54,0:54:99:0,138,2359	0/0:51,0:49:99:0,132,2185	0/0:38,1:39:84.22:0,84,1380	0/0:46,0:46:99:0,105,1716	0/0:62,0:61:99:0,166,2741	1/1:12,7:19:3.98:214,4,0	0/0:38,0:38:99:0,108,1753
chr10	108040686	.	GTA	G	120.73	PASS	AB=0.974;AC=5;AF=0.096;AN=52;BaseQRankSum=6.838;DP=1302;FS=6.129;HRun=0;HaplotypeScore=226.3038;InbreedingCoeff=0.1160;MQ=49.68;MQ0=54;MQRankSum=-7.083;QD=0.78;ReadPosRankSum=-4.312;VQSLOD=1.3193;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:35.66:0,36,580	0/0:26,0:25:6.31:0,6,42	./.	0/0:3,0:1:3.01:0,3,56	0/0:41,0:40:99:0,102,1724	0/0:37,0:36:81.10:0,81,1380	0/0:47,0:39:64.20:0,64,1018	0/1:80,3:30:99:127,0,544	0/0:57,0:57:99:0,159,2733	0/0:114,0:105:99:0,276,4418	0/0:39,0:38:99:0,102,1833	0/0:23,0:22:2.87:0,3,16	0/0:69,0:67:99:0,181,3121	0/0:65,0:65:99:0,175,2935	0/0:96,0:96:99:0,244,4243	0/0:83,0:82:99:0,176,3474	0/0:42,0:41:87.16:0,87,1655	0/0:43,0:42:99:0,108,1867	0/1:10,0:5:23.08:39,0,23	1/1:35,3:37:1.90:6,2,0	./.	0/0:56,0:55:99:0,144,2468	0/0:55,0:54:99:0,147,2504	0/0:33,0:34:79.49:0,79,1413	0/0:44,0:44:99:0,108,1923	0/0:71,0:60:99:0,162,2663	0/1:21,1:22:52.94:53,0,119	0/0:34,0:34:99:0,102,1836
chr10	108040716	.	G	GTA	98.07	PASS	AB=0.957;AC=7;AF=0.130;AN=54;BaseQRankSum=8.472;DP=1272;FS=5.126;HRun=0;HaplotypeScore=237.8403;InbreedingCoeff=0.4084;MQ=50.71;MQ0=67;MQRankSum=-4.901;QD=0.56;ReadPosRankSum=-4.216;VQSLOD=1.7498;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:16:0,16,622	1/1:17,8:24:12.23:125,12,0	0/0:4,0:2:6.02:0,6,88	0/0:8,0:4:5.99:0,6,67	0/0:45,0:44:99:0,123,1813	0/0:28,0:27:60.19:0,60,896	0/0:47,0:40:75.97:0,76,1032	0/1:93,0:35:4.93:5,0,115	0/0:62,0:62:99:0,171,2483	0/0:107,0:95:99:0,268,3864	0/0:32,0:30:77.59:0,78,1112	1/1:16,0:14:2.69:20,3,0	0/0:63,0:61:99:0,162,2367	0/0:61,0:61:99:0,168,2454	0/0:94,0:93:99:0,247,3623	0/0:82,0:81:99:0,191,2861	0/0:44,0:43:98.19:0,98,1305	0/0:47,0:46:94.38:0,94,1551	0/1:20,0:5:0.06:0,0,27	0/0:28,3:30:2.18:0,2,16	./.	0/0:49,0:48:99:0,123,1816	0/0:45,0:43:99:0,111,1694	0/0:38,0:38:75.15:0,75,1136	0/0:33,0:33:70.28:0,70,1244	0/0:79,0:67:99:0,193,2807	0/1:17,3:19:41.47:63,0,41	0/0:38,0:38:99:0,114,1744
chr10	108040718	.	GTGTA	G	629.36	PASS	AB=0.966;AC=6;AF=0.107;AN=56;BaseQRankSum=5.655;DP=1276;FS=2.352;HRun=0;HaplotypeScore=274.7333;InbreedingCoeff=0.1678;MQ=50.59;MQ0=66;MQRankSum=-7.645;QD=3.46;ReadPosRankSum=-5.662;VQSLOD=0.7010;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:37:38.11:0,38,956	0/1:21,4:24:19.02:85,0,19	0/0:8,0:2:6.02:0,6,114	0/0:8,0:4:5.87:0,6,85	0/0:42,0:41:99:0,123,2620	0/0:25,0:24:60.17:0,60,1449	0/0:45,0:38:66.75:0,67,1481	0/1:96,0:39:99:610,0,188	0/0:62,0:62:99:0,177,4133	0/0:105,0:94:99:0,253,5871	0/0:31,0:29:73.49:0,73,1869	1/1:15,1:14:2.97:26,3,0	0/0:65,0:63:99:0,162,3909	0/0:61,0:61:99:0,156,3808	0/0:91,0:90:99:0,235,5407	0/0:80,0:79:99:0,201,4530	0/0:45,0:44:77.01:0,77,1991	0/0:47,0:46:99:0,99,2248	0/1:24,0:6:18.64:19,0,32	0/0:31,0:30:0.99:0,1,3	0/0:27,0:16:2.99:0,3,24	0/0:50,0:49:99:0,132,3031	0/0:44,0:42:99:0,111,2634	0/0:39,0:39:75.62:0,76,1621	0/0:32,0:32:68.79:0,69,1991	0/0:79,0:68:99:0,179,4349	0/1:21,0:20:0.74:1,0,106	0/0:38,0:38:99:0,114,2930
chr10	108040766	.	GTA	G	320.81	PASS	AB=0.857;AC=7;AF=0.125;AN=56;BaseQRankSum=7.804;DP=1119;FS=3.993;HRun=0;HaplotypeScore=228.7773;InbreedingCoeff=0.4348;MQ=53.03;MQ0=15;MQRankSum=-6.552;QD=3.15;ReadPosRankSum=-5.687;VQSLOD=0.9965;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:57.03:0,57,1337	1/1:18,8:26:2.99:119,3,0	0/0:34,0:16:33.45:0,33,540	0/0:38,0:10:27.09:0,27,491	0/0:45,0:45:99:0,132,2301	0/0:28,0:28:84.26:0,84,1512	0/0:38,0:38:99:0,102,1823	0/1:35,0:26:99:203,0,184	0/0:69,0:69:99:0,186,3643	0/0:76,0:76:99:0,225,3918	0/0:29,0:29:84.27:0,84,1568	0/0:6,0:6:2.98:0,3,52	0/0:53,0:53:99:0,153,2810	0/0:67,0:67:99:0,195,3618	0/0:87,0:87:99:0,253,4604	0/0:69,0:69:99:0,205,3768	0/0:42,0:42:89.78:0,90,1772	0/0:41,0:41:85.94:0,86,2000	1/1:6,0:2:2.96:19,3,0	0/1:18,3:21:0:1,0,0	0/0:12,1:12:0.87:0,1,2	0/0:50,0:50:99:0,150,2795	0/0:33,0:33:96.23:0,96,1637	0/0:41,0:41:87.13:0,87,1564	0/0:25,0:25:63.01:0,63,1104	0/0:62,0:62:99:0,176,3177	0/1:8,5:13:47.72:93,0,48	0/0:30,0:30:89.98:0,90,1487
chr10	108040798	.	GTA	G	43.20	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=9.559;DP=1076;FS=0.000;HRun=0;HaplotypeScore=197.3431;InbreedingCoeff=0.5303;MQ=55.50;MQ0=14;MQRankSum=-3.766;QD=0.55;ReadPosRankSum=-3.082;VQSLOD=2.2162;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:65.93:0,66,1085	0/1:14,0:14:5.47:5,0,11	0/0:47,0:26:49.99:0,50,706	0/0:42,0:9:11.40:0,11,117	0/0:42,0:42:99:0,110,2038	0/0:25,0:25:72.22:0,72,1293	0/0:35,0:34:67.27:0,67,1294	0/1:16,0:9:31.41:31,0,86	0/0:53,0:53:99:0,120,2614	0/0:81,0:81:99:0,227,3906	0/0:31,0:31:93.27:0,93,1678	1/1:6,1:7:2.49:35,2,0	0/0:55,0:55:99:0,162,2611	0/0:62,0:62:99:0,179,2963	0/0:84,0:84:99:0,233,4048	0/0:73,1:74:99:0,161,3491	0/0:37,1:38:50.89:0,51,1557	0/0:48,0:48:95.67:0,96,2025	1/1:7,0:1:2.97:20,3,0	1/1:13,0:13:2.97:24,3,0	0/1:11,0:10:0.09:0,0,0	0/0:56,0:55:99:0,150,2703	0/0:31,0:31:83.95:0,84,1387	0/0:45,0:45:93.91:0,94,1563	0/0:26,1:27:5.92:0,6,876	0/0:58,0:57:99:0,154,2642	1/1:10,0:10:2.01:55,2,0	0/0:28,0:28:71.29:0,71,1240
chr10	108040800	.	A	ATG	272.67	PASS	AB=0.923;AC=10;AF=0.179;AN=56;BaseQRankSum=6.881;DP=1085;FS=4.223;HRun=0;HaplotypeScore=202.7688;InbreedingCoeff=0.6848;MQ=55.35;MQ0=16;MQRankSum=-6.330;QD=3.84;ReadPosRankSum=-4.798;VQSLOD=1.4985;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:59.84:0,60,758	0/0:8,6:14:2.33:0,2,20	0/0:47,0:27:68.52:0,69,807	0/0:40,0:10:18.34:0,18,144	0/0:44,0:44:99:0,114,1510	0/0:24,0:24:66.22:0,66,904	0/0:34,0:34:61.95:0,62,990	0/1:18,0:11:17.34:85,0,17	0/0:52,0:52:99:0,125,1815	0/0:79,0:79:99:0,213,2777	0/0:31,0:31:92.96:0,93,1228	1/1:6,2:8:8.83:55,9,0	0/0:56,0:56:99:0,150,1992	0/0:63,0:63:99:0,180,2420	0/0:86,0:86:99:0,226,3026	0/0:73,0:73:99:0,189,2650	0/0:38,0:38:73.05:0,73,1115	0/0:48,0:48:98.52:0,99,1507	1/1:9,0:2:3.01:40,3,0	1/1:12,2:14:2.89:17,3,0	0/1:9,2:10:0.07:1,0,0	0/0:57,0:56:99:0,145,2093	0/0:31,0:31:71.05:0,71,966	0/0:45,0:45:85.03:0,85,1119	0/0:27,0:27:59.93:0,60,791	0/0:59,0:58:99:0,144,1902	1/1:10,1:11:18.32:215,18,0	0/0:28,0:28:72.14:0,72,929
chr10	108040834	.	A	ATG	38.49	PASS	AB=0.911;AC=5;AF=0.089;AN=56;BaseQRankSum=5.781;DP=1096;FS=14.717;HRun=0;HaplotypeScore=219.4101;InbreedingCoeff=0.3316;MQ=54.26;MQ0=24;MQRankSum=-5.716;QD=0.39;ReadPosRankSum=-2.389;VQSLOD=1.2548;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:59.70:0,60,871	0/1:12,2:13:0.76:1,0,1	0/0:30,0:10:20.87:0,21,237	0/0:31,0:11:17.56:0,18,234	0/0:41,0:41:99:0,117,1633	0/0:22,0:22:60.11:0,60,835	0/0:30,0:29:63.21:0,63,894	0/1:53,1:34:66.19:66,0,765	0/0:57,0:57:99:0,146,2120	0/0:84,0:83:99:0,221,3217	0/0:32,0:32:93.31:0,93,1324	0/0:13,1:14:5.44:0,5,77	0/0:59,0:59:99:0,161,2247	0/0:68,0:68:99:0,190,2617	0/0:69,0:68:99:0,196,2751	0/0:67,0:67:99:0,180,2515	0/0:31,0:31:79.69:0,80,1092	0/0:46,0:46:98.27:0,98,1428	0/0:13,0:5:12.04:0,12,164	0/0:20,3:22:11.76:0,12,140	1/1:15,0:13:3.48:12,3,0	0/0:57,0:56:99:0,165,2278	0/0:31,0:31:81.25:0,81,1129	0/0:40,0:40:74.75:0,75,1067	0/0:31,0:31:78.26:0,78,1100	0/0:52,0:51:99:0,135,1893	0/1:12,1:12:58.51:59,0,280	0/0:34,0:34:99:0,102,1451
chr10	108040848	.	GTA	G	99.49	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=11.099;DP=1110;FS=24.231;HRun=0;HaplotypeScore=229.6125;InbreedingCoeff=0.8354;MQ=53.25;MQ0=26;MQRankSum=-10.510;QD=0.95;ReadPosRankSum=-0.376;VQSLOD=1.1768;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:35:56.67:0,57,1215	0/1:17,0:16:0:1,0,0	0/0:23,0:10:17.34:0,17,296	0/0:29,0:11:21.05:0,21,337	0/0:40,0:40:99:0,114,2124	0/0:22,0:22:57.11:0,57,1050	0/0:31,0:29:72.22:0,72,1337	0/0:56,1:35:3.48:0,3,179	0/0:63,0:63:99:0,184,3435	0/0:81,3:83:99:0,167,4255	0/0:32,0:32:93.32:0,93,1708	1/1:17,0:17:7.74:30,8,0	0/0:64,0:64:99:0,193,3420	0/0:62,0:62:99:0,178,3295	0/0:72,0:71:99:0,208,3676	0/0:63,0:63:99:0,175,3255	0/0:36,0:36:93.18:0,93,1706	0/0:42,2:44:27.44:0,27,1911	1/1:11,0:3:5.85:17,6,0	1/1:28,0:26:6.34:32,6,0	1/1:15,0:14:6.45:32,6,0	0/0:63,0:62:99:0,187,3449	0/0:34,0:34:99:0,99,1843	0/0:39,0:39:78.10:0,78,1440	0/0:32,0:32:84.27:0,84,1572	0/0:50,0:49:99:0,148,2769	1/1:17,0:15:37:138,37,0	0/0:30,0:30:90.26:0,90,1667
chr10	108040852	.	GTA	G	1746.43	PASS	AB=0.638;AC=10;AF=0.179;AN=56;BaseQRankSum=10.375;DP=1121;FS=8.274;HRun=0;HaplotypeScore=223.1983;InbreedingCoeff=0.7694;MQ=53.36;MQ0=24;MQRankSum=-10.008;QD=12.30;ReadPosRankSum=-2.020;VQSLOD=1.8346;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:71.61:0,72,1258	0/1:4,12:15:0:1,0,0	0/0:23,0:8:17.34:0,17,291	0/0:30,0:12:26.97:0,27,389	0/0:40,0:40:99:0,111,2105	0/0:20,0:20:54.12:0,54,1026	0/0:31,0:30:69.24:0,69,1315	0/1:32,23:33:99:754,0,109	0/0:67,0:67:99:0,193,3531	0/0:91,0:90:99:0,207,4432	0/0:32,0:32:96.31:0,96,1729	1/1:1,15:16:9.45:138,9,0	0/0:64,0:64:99:0,193,3449	0/0:63,0:63:99:0,172,3213	0/0:75,0:74:99:0,220,3857	0/0:63,0:63:99:0,181,3349	0/0:39,0:39:79.83:0,80,1800	0/0:41,0:42:64.41:0,64,2021	1/1:7,3:3:9.03:138,9,0	1/1:4,24:26:12.02:183,12,0	0/0:8,5:13:4.76:0,5,36	0/0:62,0:61:99:0,181,3353	0/0:36,0:36:99:0,105,1916	0/0:37,0:37:75.11:0,75,1412	0/0:33,0:33:84.29:0,84,1588	0/0:52,0:51:99:0,150,2797	1/1:0,17:17:45.14:686,45,0	0/0:28,0:28:84.29:0,84,1622
chr10	108040856	.	GTA	G	144.11	PASS	AB=0.983;AC=9;AF=0.161;AN=56;BaseQRankSum=10.822;DP=1124;FS=17.124;HRun=0;HaplotypeScore=225.7938;InbreedingCoeff=0.5952;MQ=53.65;MQ0=24;MQRankSum=-10.169;QD=0.99;ReadPosRankSum=0.164;VQSLOD=1.0769;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:66:0,66,1183	0/1:13,0:12:0:1,0,0	0/0:27,0:9:19.52:0,20,313	0/0:33,0:12:27.07:0,27,390	0/0:40,0:40:99:0,111,2019	0/0:24,0:24:63.10:0,63,1032	0/0:32,0:31:75.21:0,75,1318	0/1:53,3:34:77.05:77,0,203	0/0:66,0:66:99:0,192,3432	0/0:92,0:91:99:0,209,4289	0/0:31,0:31:87.28:0,87,1561	0/1:19,0:19:6.18:19,0,6	0/0:64,0:64:99:0,193,3352	0/0:57,0:57:99:0,165,2945	0/0:72,0:71:99:0,214,3665	0/0:65,1:66:99:0,184,3295	0/0:40,0:40:99:0,112,1890	0/0:40,1:41:59.26:0,59,1957	1/1:11,0:4:6.01:18,6,0	1/1:29,0:27:6.69:29,7,0	0/0:13,0:11:5.60:0,6,65	0/0:62,0:61:99:0,175,3181	0/0:35,0:35:99:0,102,1871	0/0:37,0:37:75.11:0,75,1401	0/0:32,0:32:84.27:0,84,1550	0/0:53,0:52:99:0,157,2862	1/1:18,0:16:4.74:131,5,0	0/0:28,0:28:84.29:0,84,1610
chr10	108040868	.	GTATGGT	G	723.14	PASS	AB=0.869;AC=5;AF=0.089;AN=56;BaseQRankSum=7.744;DP=1162;FS=5.067;HRun=0;HaplotypeScore=296.6275;InbreedingCoeff=-0.1005;MQ=52.69;MQ0=24;MQRankSum=-7.648;QD=5.56;ReadPosRankSum=-0.780;VQSLOD=1.8954;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:71.23:0,71,2146	0/0:8,0:7:13.71:0,14,50	0/0:41,0:15:42.60:0,43,1136	0/0:43,0:14:39.13:0,39,1044	0/0:40,0:40:99:0,117,3599	0/0:26,0:26:73.10:0,73,2088	0/0:33,0:32:70.12:0,70,2183	0/1:46,2:26:95.77:96,0,641	0/0:70,0:70:99:0,206,6638	0/0:87,0:87:99:0,128,7323	0/0:28,0:28:72.24:0,72,2232	0/1:16,4:20:99:107,0,136	0/0:69,0:69:99:0,205,6537	0/0:56,0:56:99:0,163,5112	0/0:80,0:79:99:0,229,6996	0/0:72,0:72:99:0,197,6155	0/0:36,0:36:99:0,102,3175	0/0:39,0:39:83.94:0,84,3149	0/1:11,0:6:66.79:67,0,283	0/1:25,7:30:62.61:160,0,63	0/0:10,2:10:11:0,11,118	0/0:58,0:57:99:0,157,4948	0/0:35,0:35:90.30:0,90,2952	0/0:38,0:38:76.09:0,76,2182	0/0:37,0:37:99:0,99,2888	0/0:55,0:54:99:0,148,4702	0/1:12,7:17:99:411,0,277	0/0:31,0:31:81.28:0,81,2672
chr10	108040882	.	ATG	A	1793.07	PASS	AB=0.751;AC=11;AF=0.196;AN=56;BaseQRankSum=12.018;DP=1211;FS=52.320;HRun=0;HaplotypeScore=218.4472;InbreedingCoeff=0.6340;MQ=52.34;MQ0=32;MQRankSum=-11.544;QD=12.28;ReadPosRankSum=-5.949;VQSLOD=0.7923;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:79.59:0,80,1337	1/1:1,8:8:18.06:228,18,0	0/0:48,0:21:41.50:0,42,646	0/0:50,0:18:32.42:0,32,585	0/0:40,0:40:99:0,111,1804	0/0:29,0:29:68.97:0,69,1142	0/0:30,2:31:24.20:0,24,964	0/1:32,15:27:99:285,0,133	0/0:73,0:73:99:0,205,3415	0/0:95,0:94:99:0,243,3863	0/0:23,0:23:66.19:0,66,1058	1/1:4,17:21:33.95:470,34,0	0/0:68,0:68:99:0,196,3228	0/0:56,0:56:99:0,141,2265	0/0:83,0:82:99:0,214,3478	0/0:83,0:83:99:0,203,3312	0/0:38,1:39:67.15:0,67,1630	0/0:42,0:42:99:0,99,1559	0/1:11,2:4:34.82:87,0,35	1/1:7,22:27:41.82:548,42,0	1/1:8,2:8:3.01:39,3,0	0/0:54,0:54:99:0,148,2448	0/0:37,0:37:73.55:0,74,1700	0/0:39,0:39:60.03:0,60,999	0/0:38,0:38:99:0,102,1698	0/0:61,0:59:99:0,154,2488	0/1:7,10:17:7.22:302,0,7	0/0:31,0:31:81.28:0,81,1346
chr10	108040892	.	G	GTA	49.34	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=8.104;DP=1216;FS=3.378;HRun=0;HaplotypeScore=232.5548;InbreedingCoeff=0.0819;MQ=52.01;MQ0=38;MQRankSum=-8.077;QD=0.41;ReadPosRankSum=-3.282;VQSLOD=2.0537;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:63.93:0,64,1097	0/1:9,0:8:7.75:8,0,32	0/0:39,0:16:38.97:0,39,496	0/0:49,0:19:50.18:0,50,496	0/0:39,0:39:99:0,114,1489	0/0:29,1:30:71.94:0,72,972	0/0:34,0:32:77.79:0,78,967	0/1:42,0:23:36.86:37,0,239	0/0:73,0:73:99:0,208,2879	0/0:95,0:93:99:0,246,3381	0/0:23,0:23:66.15:0,66,850	0/1:23,0:23:25.47:25,0,95	0/0:69,0:69:99:0,195,2607	0/0:58,0:58:99:0,150,1911	0/0:78,2:80:99:0,168,2811	0/0:80,1:81:99:0,207,2781	0/0:44,0:44:99:0,112,1417	0/0:38,0:38:99:0,102,1321	0/0:20,0:6:11.87:0,12,82	0/1:30,0:27:17.27:83,0,17	1/1:15,0:12:1.54:4,2,0	0/0:54,0:54:99:0,156,2050	0/0:40,0:40:99:0,111,1453	0/0:40,0:40:65.19:0,65,821	0/0:36,0:36:99:0,99,1376	0/0:57,0:55:99:0,159,2058	0/0:20,0:18:0.68:0,1,154	0/0:29,0:29:72.19:0,72,986
chr10	108040902	.	ATGTATGTG	A	2858.83	PASS	AB=0.980;AC=12;AF=0.214;AN=56;BaseQRankSum=10.761;DP=1233;FS=48.057;HRun=0;HaplotypeScore=351.8048;InbreedingCoeff=0.7450;MQ=51.61;MQ0=31;MQRankSum=-9.597;QD=16.43;ReadPosRankSum=-5.221;VQSLOD=0.9922;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:72.16:0,72,2522	1/1:5,6:10:18.06:355,18,0	0/0:38,0:16:23.22:0,23,328	0/0:42,0:19:37.94:0,38,693	0/0:36,0:36:84.27:0,84,2940	0/0:36,0:36:84.27:0,84,2616	0/0:35,0:33:51.11:0,51,1686	0/1:41,0:22:99:103,0,371	0/0:76,0:76:99:0,181,6074	0/0:104,0:103:99:0,240,8218	0/0:21,0:21:57.16:0,57,1915	1/1:10,16:26:41.54:740,42,0	0/0:69,0:69:99:0,178,6379	0/0:50,0:50:99:0,114,3822	0/0:79,0:78:99:0,204,7342	0/0:85,0:84:99:0,174,6483	0/0:45,0:45:99:0,103,3447	0/0:44,0:44:89.72:0,90,3301	0/1:23,1:8:40.19:257,0,40	1/1:16,16:29:48.10:788,48,0	1/1:17,1:14:3.01:53,3,0	0/0:54,0:54:99:0,129,4332	0/0:43,0:43:99:0,123,4183	0/0:38,0:39:59.97:0,60,1961	0/0:35,0:35:87.28:0,87,3251	0/0:57,0:55:99:0,151,5106	1/1:15,7:20:39.09:737,39,0	0/0:27,0:27:54.19:0,54,1942
chr10	108040916	.	G	GTA	320.69	PASS	AB=0.990;AC=6;AF=0.107;AN=56;BaseQRankSum=11.082;DP=1252;FS=22.962;HRun=0;HaplotypeScore=244.0856;InbreedingCoeff=0.2602;MQ=51.81;MQ0=31;MQRankSum=-9.631;QD=2.65;ReadPosRankSum=-4.801;VQSLOD=0.2656;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:77.38:0,77,1132	0/1:14,0:13:47.35:61,0,47	0/0:49,0:13:5.34:0,5,262	0/0:42,0:18:47.27:0,47,563	0/0:31,0:31:90.26:0,90,1312	0/0:40,0:40:96.04:0,96,1419	0/0:32,0:30:66.06:0,66,934	0/0:49,0:35:27.66:0,28,861	0/0:68,0:68:99:0,200,2855	0/0:98,0:96:99:0,263,3920	0/0:23,0:23:63.16:0,63,916	0/1:29,0:29:20.45:159,0,20	0/0:68,0:68:99:0,196,2957	0/0:51,1:52:99:0,144,2053	0/0:83,0:82:99:0,232,3464	0/0:81,0:80:99:0,199,2986	0/0:44,0:44:99:0,122,1757	0/0:47,1:48:41.42:0,41,1738	0/0:21,0:8:5.97:0,6,99	1/1:31,0:28:16:207,16,0	0/1:23,1:20:10.41:10,0,17	0/0:48,0:48:99:0,141,2106	0/0:45,0:45:99:0,132,1997	0/0:44,2:46:92.21:0,92,1326	0/0:35,0:35:90.28:0,90,1334	0/0:59,0:58:99:0,163,2416	0/1:23,0:22:1.26:1,0,254	0/0:22,0:22:66.22:0,66,1004
chr10	108040996	.	TTGTGTGTGTATG	T	1975.55	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=4.205;DP=1123;FS=54.402;HRun=0;HaplotypeScore=318.4440;InbreedingCoeff=0.7951;MQ=50.12;MQ0=51;MQRankSum=-8.817;QD=9.88;ReadPosRankSum=-5.431;VQSLOD=0.1649;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:97.22:0,97,3870	1/1:8,7:15:0.47:1,0,0	0/0:65,0:6:12.03:0,12,225	0/0:65,0:11:33.08:0,33,547	0/0:28,0:28:75.24:0,75,3117	0/0:31,0:30:60.17:0,60,2417	0/0:31,0:31:63.19:0,63,2693	0/1:51,0:37:67.47:628,0,67	0/0:57,0:57:99:0,135,6091	0/0:74,0:70:99:0,150,6628	0/0:28,0:27:50.77:0,51,2433	1/1:22,0:21:32.70:357,33,0	0/0:45,0:44:84.27:0,84,3891	0/0:45,0:45:99:0,102,4544	0/0:59,0:56:99:0,135,6515	0/0:44,0:43:92.27:0,92,4273	0/0:39,0:38:78.27:0,78,3212	0/0:29,0:28:24.51:0,25,1761	1/1:6,11:15:26.19:647,26,0	1/1:9,10:19:9.84:62,10,0	1/1:16,29:41:2.87:20,3,0	0/0:47,0:46:99:0,109,4688	0/0:35,0:34:81.28:0,81,4215	0/0:43,0:44:78.70:0,79,3333	0/0:27,0:27:69.19:0,69,3164	0/0:57,0:54:99:0,104,5280	1/1:8,23:29:12.04:425,12,0	0/0:21,0:21:54.19:0,54,2252
chr10	108041006	.	ATGTG	A	591.70	PASS	AB=0.973;AC=5;AF=0.089;AN=56;BaseQRankSum=5.463;DP=1057;FS=37.873;HRun=0;HaplotypeScore=173.6816;InbreedingCoeff=0.3225;MQ=50.90;MQ0=38;MQRankSum=-6.150;QD=5.58;ReadPosRankSum=-1.731;VQSLOD=1.4088;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:83.27:0,83,2284	0/0:12,0:12:0:0,0,0	0/0:52,0:11:26.29:0,26,372	0/0:61,0:19:57.03:0,57,853	0/0:31,0:31:87.28:0,87,2005	0/0:30,0:29:75.21:0,75,1543	0/0:32,0:32:68.30:0,68,1598	0/1:41,4:35:99:343,0,400	0/0:55,0:55:99:0,153,3494	0/0:69,0:66:99:0,172,3977	0/0:29,0:28:57.94:0,58,1475	0/1:18,0:17:88.40:163,0,88	0/0:43,0:42:99:0,99,2348	0/0:44,0:44:99:0,105,2540	0/0:58,0:55:99:0,147,3527	0/0:47,0:46:99:0,117,2607	0/0:36,0:36:87.24:0,87,2008	0/0:27,0:26:39.42:0,39,1194	0/1:16,0:14:64.82:86,0,65	0/0:12,0:12:8.84:0,9,55	0/0:41,0:37:2.94:0,3,18	0/0:47,0:46:99:0,121,2693	0/0:33,0:32:90.31:0,90,2247	0/0:40,0:41:81.24:0,81,1894	0/0:27,0:27:75.21:0,75,1770	0/0:54,0:52:99:0,115,3063	1/1:27,0:25:12.02:118,12,0	0/0:20,0:20:57.20:0,57,1298
chr10	108041357	.	T	TG	3606.42	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.127;DP=473;FS=1.365;HRun=7;HaplotypeScore=59.5064;InbreedingCoeff=0.9851;MQ=73.97;MQ0=0;MQRankSum=-1.587;QD=28.18;ReadPosRankSum=-1.448;VQSLOD=3.8076;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,111,1060	1/1:0,2:5:11.63:80,12,0	0/0:17,0:17:45.01:0,45,416	0/0:12,1:12:17.78:0,18,150	0/0:12,0:12:33.05:0,33,318	0/0:10,0:10:24.03:0,24,232	0/0:20,0:20:42.06:0,42,406	1/1:1,11:12:33.10:399,33,0	0/0:21,0:21:63.10:0,63,608	0/0:18,0:18:54.09:0,54,521	0/0:7,0:7:21.03:0,21,202	1/1:3,24:27:63.19:761,63,0	0/0:18,0:18:54.09:0,54,521	0/0:19,0:19:51.07:0,51,488	0/0:14,0:14:42.07:0,42,406	0/0:9,0:9:27.03:0,27,255	0/0:26,0:26:66.06:0,66,624	0/0:21,0:21:60:0,60,556	1/1:5,13:18:39.12:471,39,0	1/1:5,13:18:36.03:415,36,0	1/1:2,31:33:84.26:1015,84,0	0/0:19,0:19:45.06:0,45,435	0/0:12,0:12:33.05:0,33,319	0/0:15,0:15:39.06:0,39,377	0/0:13,0:13:30.04:0,30,286	0/0:14,0:14:36.06:0,36,348	1/1:2,13:15:39.12:466,39,0	0/0:5,0:5:12.02:0,12,116
chr10	108041563	.	TG	T	4751.44	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.856;DP=656;FS=1.093;HRun=6;HaplotypeScore=64.9082;InbreedingCoeff=0.9960;MQ=87.93;MQ0=0;MQRankSum=-1.248;QD=27.62;ReadPosRankSum=-0.838;VQSLOD=4.9265;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,1784	1/1:0,6:6:18.05:193,18,0	0/0:24,0:24:57.68:0,58,718	0/0:24,0:24:62.74:0,63,726	0/0:9,0:9:24.06:0,24,299	0/0:23,0:23:63.19:0,63,815	0/0:29,0:29:81.24:0,81,1038	1/1:3,22:25:66.07:683,66,0	0/0:27,0:27:75.21:0,75,966	0/0:17,0:17:45.14:0,45,579	0/0:16,0:16:45.15:0,45,591	1/1:3,32:35:90.22:967,90,0	0/0:24,0:24:69.21:0,69,894	0/0:26,0:26:75.21:0,75,949	0/0:23,0:23:63.19:0,63,814	0/0:21,0:21:57.16:0,57,721	0/0:32,0:32:93.30:0,93,1224	0/0:20,0:20:57.18:0,57,747	1/1:2,21:23:63.11:654,63,0	1/1:2,10:12:24.06:257,24,0	1/1:3,55:58:99:1676,156,0	0/0:17,0:17:45.08:0,45,570	0/0:9,0:9:27.09:0,27,346	0/0:52,0:52:99:0,141,1853	0/0:15,0:15:42.12:0,42,538	0/0:20,0:20:51.14:0,51,632	1/1:1,12:13:30.07:322,30,0	0/0:8,0:8:18.06:0,18,237
chr10	108043044	.	ACCCTTAACCGCGGAGCGGCAG	A	743.31	PASS	AC=2;AF=0.045;AN=44;BaseQRankSum=3.763;DP=487;FS=6.909;HRun=0;HaplotypeScore=254.4443;InbreedingCoeff=0.4723;MQ=65.59;MQ0=0;MQRankSum=-3.763;QD=57.18;ReadPosRankSum=0.647;VQSLOD=2.1838;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:30.06:0,30,1157	./.	0/0:10,0:8:2.90:0,3,16	./.	0/0:10,0:10:3:0,3,25	0/0:16,0:16:20.96:0,21,687	0/0:24,0:24:38.16:0,38,3322	0/0:16,0:16:8.44:0,8,122	0/0:22,0:22:36.12:0,36,2942	0/0:23,0:23:12.03:0,12,348	./.	1/1:5,8:13:15.05:830,15,0	0/0:21,0:21:36.12:0,36,3158	0/0:15,0:15:30.05:0,30,1990	0/0:16,0:16:12.04:0,12,1076	0/0:16,0:16:21.07:0,21,1567	0/0:32,0:32:66.23:0,66,5352	0/0:36,0:36:60.21:0,60,5244	0/0:16,0:16:3.01:0,3,225	./.	0/0:39,0:39:33.01:0,33,1744	./.	./.	0/0:28,0:28:51.17:0,51,4471	0/0:17,0:17:18.06:0,18,690	0/0:12,0:12:3.01:0,3,130	0/0:20,0:20:42.14:0,42,3490	0/0:6,0:6:6.02:0,6,362
chr10	108043236	.	G	GC	6749.41	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=3.194;DP=575;FS=4.121;HRun=1;HaplotypeScore=67.8516;InbreedingCoeff=0.9955;MQ=71.36;MQ0=0;MQRankSum=-1.102;QD=40.66;ReadPosRankSum=-2.968;VQSLOD=4.2802;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.30:0,93,1207	1/1:0,9:9:24.08:351,24,0	0/0:9,0:9:18.06:0,18,233	0/0:10,0:10:21.52:0,22,249	0/0:15,0:15:42.14:0,42,545	0/0:27,0:27:81.25:0,81,1037	0/0:23,0:23:60.16:0,60,761	1/1:2,26:28:78.25:1147,78,0	0/0:23,0:23:63.18:0,63,799	0/0:14,0:14:39.13:0,39,506	0/0:12,0:12:27.09:0,27,349	1/1:1,18:19:51.17:763,51,0	0/0:29,0:29:75.23:0,75,955	0/0:24,0:24:66.20:0,66,841	0/0:13,0:13:39.13:0,39,506	0/0:9,0:9:27.09:0,27,351	0/0:32,0:32:90.29:0,90,1168	0/0:25,0:25:72.19:0,72,915	1/1:0,18:18:54.18:802,54,0	1/1:0,10:10:21.07:315,21,0	1/1:5,61:66:99:2789,190,0	0/0:18,0:18:48.14:0,48,609	0/0:8,0:8:21.05:0,21,258	0/0:33,0:33:93.30:0,93,1207	0/0:16,0:16:45.15:0,45,584	0/0:25,0:25:69.20:0,69,862	1/1:0,16:16:39.13:583,39,0	0/0:11,0:11:30.10:0,30,389
chr10	108043385	.	A	ACGAC	6114.47	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=6.161;DP=498;FS=0.936;HRun=0;HaplotypeScore=98.1444;InbreedingCoeff=0.9333;MQ=73.55;MQ0=0;MQRankSum=-13.018;QD=40.76;ReadPosRankSum=-4.616;VQSLOD=3.6082;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.25:0,72,1294	1/1:2,5:7:11.96:310,12,0	0/0:8,0:8:18.06:0,18,324	0/0:12,0:12:21.07:0,21,332	0/0:8,0:8:15.05:0,15,270	0/0:10,0:10:30.10:0,30,532	0/0:37,0:37:99:0,99,1780	1/1:11,15:26:57.19:1332,57,0	0/0:20,0:20:45.15:0,45,809	0/0:20,0:20:54.18:0,54,944	0/0:6,0:6:15.03:0,15,234	1/1:8,16:24:45.15:1158,45,0	0/0:23,0:23:54.15:0,54,937	0/0:21,0:21:57.19:0,57,1009	0/0:14,0:14:33.11:0,33,593	0/0:9,0:9:21.07:0,21,377	0/0:39,0:39:99:0,102,1744	0/0:26,0:26:75.26:0,75,1331	1/1:11,13:24:48.12:906,48,0	1/1:3,6:9:15.05:387,15,0	1/1:24,17:42:38.46:936,38,0	0/0:11,0:11:30.09:0,30,509	0/0:3,0:3:6.02:0,6,108	0/0:25,0:25:72.25:0,72,1279	0/0:12,0:12:36.12:0,36,639	0/0:14,0:14:39.13:0,39,701	1/1:3,15:18:42.14:1086,42,0	0/0:2,0:2:3.01:0,3,54
chr10	108044108	.	G	GA	713.46	PASS	AB=0.875;AC=15;AF=0.278;AN=54;BaseQRankSum=6.133;DP=381;FS=2.495;HRun=8;HaplotypeScore=74.6672;InbreedingCoeff=0.6854;MQ=45.64;MQ0=7;MQRankSum=-5.319;QD=7.59;ReadPosRankSum=-2.245;VQSLOD=0.9789;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:35.85:0,36,329	1/1:1,4:5:3.01:35,3,0	0/1:3,0:1:0:0,0,0	./.	0/0:12,0:12:9.23:0,9,105	0/1:14,1:15:13.63:14,0,140	0/0:21,0:21:44.96:0,45,401	1/1:10,8:16:26.08:262,26,0	0/0:12,0:12:14.97:0,15,136	0/0:13,0:14:26.05:0,26,225	0/0:10,0:10:24.01:0,24,219	1/1:7,5:12:18.93:200,19,0	0/0:11,0:11:14.90:0,15,136	0/0:12,0:12:17.91:0,18,164	0/0:8,0:8:15:0,15,137	0/0:12,0:12:18:0,18,160	0/0:35,0:34:46.13:0,46,452	0/0:33,0:33:59.97:0,60,537	0/1:6,4:10:12.56:88,0,13	1/1:4,5:8:9.02:98,9,0	1/1:7,5:11:5.97:54,6,0	0/0:10,0:10:17.75:0,18,164	0/0:7,0:7:15.01:0,15,136	0/0:24,0:24:38.92:0,39,352	0/0:8,0:8:18:0,18,164	0/0:10,0:9:24.01:0,24,219	1/1:4,5:8:12.92:134,13,0	0/0:9,0:6:8.92:0,9,82
chr10	108044121	.	CAGAAA	C	1463.05	PASS	AB=0.857;AC=13;AF=0.232;AN=56;BaseQRankSum=7.354;DP=389;FS=2.698;HRun=0;HaplotypeScore=77.2645;InbreedingCoeff=0.7871;MQ=45.59;MQ0=5;MQRankSum=-5.830;QD=19.00;ReadPosRankSum=-2.799;VQSLOD=2.8835;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:36:84.85:0,85,1609	1/1:3,0:4:0.47:1,0,0	0/0:6,0:3:2.30:0,2,46	0/0:2,0:1:0:0,0,0	0/0:8,0:8:14.91:0,15,256	0/0:13,0:16:39.12:0,39,815	0/0:23,0:23:57.07:0,57,1423	1/1:7,4:14:35.88:386,36,0	0/0:12,0:12:32.97:0,33,716	0/0:16,0:17:48.11:0,48,900	0/0:11,0:11:32.89:0,33,626	0/1:10,0:12:36.21:70,0,36	0/0:9,0:10:21.06:0,21,442	0/0:12,0:12:27.06:0,27,537	0/0:7,0:7:18.02:0,18,292	0/0:10,0:10:18.03:0,18,361	0/0:31,0:32:51.97:0,52,1472	0/0:33,0:33:69.04:0,69,1506	1/1:3,6:12:30.06:452,30,0	1/1:4,4:9:17.87:223,18,0	1/1:6,3:12:23.36:234,23,0	0/0:8,0:8:20.63:0,21,440	0/0:8,0:8:21.06:0,21,454	0/0:24,0:24:63.56:0,64,1352	0/0:10,0:10:29.97:0,30,558	0/0:16,0:15:39.08:0,39,653	1/1:9,2:10:23.18:270,23,0	0/0:8,0:6:14.96:0,15,246
chr10	108044881	.	GATGAGATTTGGC	G	2105.47	PASS	AC=4;AF=0.087;AN=46;BaseQRankSum=7.274;DP=559;FS=0.844;HRun=0;HaplotypeScore=230.3781;InbreedingCoeff=0.9916;MQ=96.00;MQ0=0;MQRankSum=-7.552;QD=75.20;ReadPosRankSum=2.400;VQSLOD=3.1244;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,6818	1/1:0,7:7:15.05:589,15,0	0/0:29,0:29:81.54:0,82,3420	0/0:29,0:29:81.72:0,82,3663	0/0:27,0:27:81.28:0,81,4591	0/0:20,0:20:60.20:0,60,3160	0/0:28,0:28:84.25:0,84,4603	./.	0/0:15,0:15:42.14:0,42,2605	0/0:25,0:25:69.24:0,69,3678	0/0:16,0:16:48.16:0,48,2287	1/1:0,21:21:45.15:1632,45,0	0/0:25,0:25:75.26:0,75,3946	0/0:27,0:27:81.28:0,81,4650	0/0:27,0:27:81.28:0,81,4558	0/0:32,0:32:96.33:0,96,4961	0/0:37,0:37:99:0,111,6213	0/0:21,0:21:63.21:0,63,3436	./.	./.	./.	0/0:13,0:13:39.13:0,39,1874	0/0:23,0:23:66.23:0,66,3618	0/0:38,0:38:99:0,114,6075	0/0:17,0:17:51.17:0,51,2191	0/0:24,0:24:66.22:0,66,3640	./.	0/0:19,0:19:57.18:0,57,3375
chr10	108044956	.	TGGAAG	T	668.68	PASS	AC=4;AF=0.087;AN=46;BaseQRankSum=5.157;DP=492;FS=10.913;HRun=0;HaplotypeScore=113.0102;InbreedingCoeff=0.9664;MQ=83.77;MQ0=0;MQRankSum=-5.597;QD=51.44;ReadPosRankSum=0.482;VQSLOD=3.4908;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.32:0,93,2950	1/1:0,3:3:9.03:194,9,0	0/0:21,0:21:57.20:0,57,1608	0/0:14,0:14:27.09:0,27,768	0/0:22,0:22:63.22:0,63,1999	0/0:22,0:22:63.22:0,63,1955	0/0:27,0:27:78.27:0,78,2475	./.	0/0:18,0:18:54.19:0,54,1710	0/0:34,0:34:96.33:0,96,2947	0/0:10,0:10:30.10:0,30,951	1/1:1,9:10:27.09:586,27,0	0/0:28,0:28:84.29:0,84,2591	0/0:20,0:20:60.21:0,60,1905	0/0:18,0:18:51.18:0,51,1619	0/0:32,0:32:93.32:0,93,2939	0/0:38,0:38:99:0,114,3594	0/0:20,0:20:60.21:0,60,1904	./.	./.	./.	0/0:19,0:19:54.19:0,54,1710	0/0:17,0:17:48.16:0,48,1509	0/0:33,0:33:99:0,99,3142	0/0:24,0:24:72.25:0,72,2257	0/0:21,0:21:63.22:0,63,1903	./.	0/0:8,0:8:24.08:0,24,761
chr10	108045149	.	CGT	C	174.57	PASS	AB=0.886;AC=13;AF=0.295;AN=44;BaseQRankSum=6.467;DP=556;FS=3.259;HRun=0;HaplotypeScore=102.0597;InbreedingCoeff=-0.1969;MQ=59.35;MQ0=2;MQRankSum=-1.258;QD=0.63;ReadPosRankSum=0.642;VQSLOD=1.9037;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:38:45.15:0,45,671	0/1:5,0:9:4.78:5,0,13	./.	./.	0/0:27,0:27:5.76:0,6,426	0/1:15,2:17:40.21:40,0,285	0/1:17,2:19:29.95:30,0,397	./.	0/0:29,2:31:22.90:0,23,728	0/1:21,3:24:28.22:28,0,368	0/0:9,0:9:24.03:0,24,332	1/1:6,0:13:14.17:79,14,0	0/1:24,2:27:51.31:51,0,267	0/1:14,2:16:6.82:7,0,278	0/1:34,4:38:14.19:14,0,1040	0/0:25,1:28:9.34:0,9,643	0/1:25,2:27:13.16:13,0,627	0/0:17,0:18:22.44:0,22,337	./.	0/0:1,0:1:3.01:0,3,46	./.	0/1:19,3:22:6.58:7,0,295	0/0:20,0:22:38.74:0,39,523	0/1:39,2:43:30.60:31,0,992	0/0:17,1:18:5.37:0,5,433	0/0:27,1:27:15.38:0,15,603	./.	0/1:21,2:23:3.52:4,0,374
chr10	108045188	.	GCT	G	295.38	PASS	AC=4;AF=0.083;AN=48;BaseQRankSum=7.259;DP=621;FS=11.832;HRun=0;HaplotypeScore=122.5863;InbreedingCoeff=0.8461;MQ=63.17;MQ0=9;MQRankSum=-4.746;QD=9.85;ReadPosRankSum=0.121;VQSLOD=2.8354;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:83.05:0,83,1343	1/1:0,11:11:6.02:69,6,0	0/0:30,0:12:12.51:0,13,188	0/0:37,0:20:46.84:0,47,629	0/0:26,1:27:67.15:0,67,910	0/0:20,0:20:56.50:0,57,848	0/0:25,0:25:71.72:0,72,1042	./.	0/0:32,0:32:82.37:0,82,1359	0/0:35,0:34:98.76:0,99,1500	0/0:14,0:14:39.12:0,39,635	1/1:0,19:19:29.92:335,30,0	0/0:25,0:25:65.70:0,66,995	0/0:23,0:23:53.97:0,54,772	0/0:37,0:37:97.84:0,98,1658	0/0:29,0:29:81.18:0,81,1375	0/0:29,0:29:77.46:0,77,1282	0/0:22,0:22:55.05:0,55,900	./.	0/0:1,0:1:3.01:0,3,58	./.	0/0:19,0:19:43.89:0,44,644	0/0:22,0:22:66.19:0,66,1102	0/0:52,0:52:99:0,141,2265	0/0:25,0:25:63.04:0,63,966	0/0:26,0:26:55.59:0,56,1080	./.	0/0:20,0:19:53.65:0,54,855
chr10	108045346	.	GTT	G	659.28	PASS	AB=0.571;AC=3;AF=0.063;AN=48;BaseQRankSum=7.008;DP=795;FS=11.644;HRun=3;HaplotypeScore=148.7181;InbreedingCoeff=0.5701;MQ=57.73;MQ0=5;MQRankSum=-1.247;QD=18.84;ReadPosRankSum=1.060;VQSLOD=0.4222;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:61:99:0,165,3001	0/1:2,6:8:39.99:189,0,40	0/0:52,0:33:92.94:0,93,1590	0/0:57,0:40:99:0,108,1823	0/0:25,0:25:75.24:0,75,1354	0/0:20,0:20:57.20:0,57,1101	0/0:54,0:54:99:0,155,2792	./.	0/0:45,0:45:99:0,126,2354	0/0:42,0:41:99:0,126,2291	0/0:16,0:16:48.16:0,48,881	1/1:4,23:27:38.89:574,39,0	0/0:24,0:24:72.21:0,72,1343	0/0:31,0:31:93.26:0,93,1705	0/0:42,0:42:99:0,120,2273	0/0:37,0:36:99:0,102,1864	0/0:45,0:45:99:0,127,2347	0/0:37,1:38:90.26:0,90,1907	0/0:1,0:1:3.01:0,3,58	./.	./.	0/0:26,0:26:69.24:0,69,1327	0/0:20,0:20:60.20:0,60,1114	0/0:47,0:47:99:0,132,2407	0/0:21,0:21:60.10:0,60,1022	0/0:34,0:34:99:0,99,1844	./.	0/0:21,0:21:62.23:0,62,1130
chr10	108045388	.	ATG	A	544.89	PASS	AB=0.901;AC=8;AF=0.174;AN=46;BaseQRankSum=9.296;DP=809;FS=3.302;HRun=0;HaplotypeScore=151.7248;InbreedingCoeff=-0.0206;MQ=55.86;MQ0=16;MQRankSum=1.146;QD=2.53;ReadPosRankSum=0.864;VQSLOD=2.8406;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:67,6:73:3.03:0,3,1419	0/1:11,0:11:18.77:106,0,19	0/1:57,1:25:17.01:17,0,152	0/0:48,0:21:20.85:0,21,209	0/0:21,3:24:1.12:0,1,482	0/0:17,2:19:1.11:0,1,457	0/0:56,1:57:73.36:0,73,1557	./.	0/0:36,3:39:17.26:0,17,1131	0/0:38,2:40:17.47:0,17,894	0/0:18,0:18:24.08:0,24,376	1/1:36,0:36:34.75:327,35,0	0/0:28,0:28:57.12:0,57,834	0/0:34,0:34:13.51:0,14,920	0/0:32,5:37:2.25:0,2,934	0/1:24,4:26:25.03:25,0,559	0/0:48,2:50:64.30:0,64,1436	0/0:39,1:40:50.81:0,51,1216	./.	./.	./.	0/0:21,0:21:36.11:0,36,531	0/0:20,0:20:54.13:0,54,774	0/1:39,6:45:46.79:47,0,1077	0/1:16,6:22:99:121,0,457	0/0:38,1:40:2.26:0,2,877	./.	0/1:13,2:15:30.90:31,0,452
chr10	108045413	.	TGC	T	881.58	PASS	AB=1.000;AC=5;AF=0.109;AN=46;BaseQRankSum=11.103;DP=682;FS=9.546;HRun=0;HaplotypeScore=119.3299;InbreedingCoeff=0.7799;MQ=66.31;MQ0=8;MQRankSum=-0.251;QD=14.69;ReadPosRankSum=4.584;VQSLOD=2.7484;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:55:99:0,112,2078	1/1:3,7:10:18.06:273,18,0	0/0:35,0:24:44.60:0,45,538	0/0:32,0:19:47.32:0,47,446	0/0:19,0:19:35.76:0,36,716	0/0:13,0:13:18.91:0,19,494	0/0:48,0:48:99:0,110,1998	./.	0/0:39,0:39:77.62:0,78,1498	0/0:31,0:31:79.41:0,79,1286	0/0:13,0:13:33.03:0,33,508	1/1:5,19:24:51.06:722,51,0	0/0:25,0:24:65.69:0,66,1081	0/0:34,1:35:42.79:0,43,1327	0/0:37,0:37:78.06:0,78,1382	0/0:26,0:24:40.49:0,40,845	0/0:48,0:48:99:0,109,1946	0/0:33,0:33:85.77:0,86,1600	./.	./.	./.	0/0:18,0:18:42.04:0,42,694	0/0:20,0:20:57.15:0,57,965	0/0:45,0:45:72.19:0,72,1527	0/1:26,0:26:8:8,0,633	0/0:35,0:35:77.32:0,77,1328	./.	0/0:13,0:13:10.72:0,11,582
chr10	108045556	.	CT	C	4863.90	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=16.306;DP=666;FS=0.000;HRun=2;HaplotypeScore=87.3661;InbreedingCoeff=0.9980;MQ=82.65;MQ0=0;MQRankSum=-4.807;QD=32.64;ReadPosRankSum=-0.181;VQSLOD=4.4207;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1639	1/1:0,13:13:33.11:427,33,0	0/0:24,0:24:69.14:0,69,902	0/0:18,0:18:37.05:0,37,525	0/0:17,0:17:51.12:0,51,684	0/0:24,0:24:69.23:0,69,1032	0/0:24,0:24:72.23:0,72,1058	1/1:1,21:22:60.14:744,60,0	0/0:26,0:26:78.22:0,78,1108	0/0:29,0:29:87.28:0,87,1255	0/0:7,0:7:18.05:0,18,252	1/1:0,25:25:63.20:812,63,0	0/0:24,0:24:72.24:0,72,1068	0/0:31,2:33:57.38:0,57,1306	0/0:26,0:26:72.21:0,72,1019	0/0:24,0:24:69.18:0,69,954	0/0:33,0:33:99:0,99,1443	0/0:18,0:18:51.13:0,51,737	1/1:0,19:19:57.16:711,57,0	1/1:0,8:8:23.98:272,24,0	1/1:0,46:46:99:1356,105,0	0/0:29,0:29:87.28:0,87,1273	0/0:15,0:15:45.14:0,45,652	0/0:34,0:34:99:0,102,1443	0/0:20,0:20:57.19:0,57,846	0/0:40,0:40:99:0,117,1712	1/1:0,16:16:42.14:543,42,0	0/0:11,0:11:33.06:0,33,448
chr10	108046715	.	G	GC	3217.75	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-7.386;DP=529;FS=0.437;HRun=4;HaplotypeScore=54.0499;InbreedingCoeff=0.9834;MQ=81.43;MQ0=0;MQRankSum=-1.423;QD=28.73;ReadPosRankSum=-0.953;VQSLOD=2.5320;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:91.22:0,91,981	1/1:1,7:8:14.45:201,14,0	0/0:13,0:13:33.09:0,33,369	0/0:14,0:14:26.34:0,26,251	0/0:14,0:14:11.13:0,11,309	0/0:18,0:18:47.45:0,47,495	0/0:37,0:37:99:0,99,1121	1/1:1,12:13:36.08:439,36,0	0/0:21,0:21:60.14:0,60,660	0/0:16,0:16:39.09:0,39,425	0/0:14,0:14:39.11:0,39,440	1/1:2,15:18:42.14:569,42,0	0/0:14,0:14:39.11:0,39,442	0/0:17,0:17:48.12:0,48,532	0/0:13,0:13:39.11:0,39,442	0/0:15,0:14:42.12:0,42,476	0/0:40,0:40:99:0,105,1190	0/0:24,0:23:69.20:0,69,782	1/1:3,12:15:39.11:507,39,0	1/1:1,5:6:11.97:140,12,0	1/1:3,35:38:87.29:1189,87,0	0/0:10,0:10:30.05:0,30,319	0/0:12,0:12:30.05:0,30,319	0/0:36,0:36:99:0,102,1126	0/0:21,0:21:51.13:0,51,566	0/0:18,0:18:46.01:0,46,510	1/1:2,12:14:27.09:369,27,0	0/0:12,0:12:36.04:0,36,382
chr10	108047636	.	CAT	C	1589.69	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=9.836;DP=681;FS=11.853;HRun=0;HaplotypeScore=103.6955;InbreedingCoeff=0.8805;MQ=63.63;MQ0=11;MQRankSum=-1.857;QD=10.81;ReadPosRankSum=-2.748;VQSLOD=2.2527;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:98.93:0,99,1085	1/1:5,0:5:5.81:34,6,0	0/0:29,0:12:30.81:0,31,293	0/0:29,0:18:36.02:0,36,421	0/0:11,0:11:29.90:0,30,349	0/0:22,0:21:50.95:0,51,482	0/0:37,0:37:77.60:0,78,801	1/1:2,26:26:73.57:495,74,0	0/0:37,0:37:86.52:0,87,874	0/0:23,0:23:51.45:0,51,617	0/0:16,0:16:40.87:0,41,407	0/1:19,0:18:12.10:18,0,12	0/0:17,0:17:29.59:0,30,352	0/0:16,0:16:36.49:0,36,406	0/0:22,0:22:54.04:0,54,629	0/0:23,0:23:63.02:0,63,672	0/0:33,0:33:83.97:0,84,973	0/0:22,0:22:54.04:0,54,592	1/1:0,15:15:35.31:253,35,0	1/1:0,18:19:30.05:419,30,0	1/1:3,39:42:18.06:282,18,0	0/0:16,0:16:32.02:0,32,313	0/0:14,0:14:27.28:0,27,389	0/0:51,0:51:99:0,129,1517	0/0:24,0:24:56.86:0,57,655	0/0:31,0:30:79.63:0,80,782	1/1:0,17:18:16.46:274,16,0	0/0:19,0:19:56.06:0,56,623
chr10	108047637	.	A	ATG	3187.84	PASS	AB=0.793;AC=23;AF=0.442;AN=52;BaseQRankSum=-6.874;DP=708;FS=4.884;HRun=0;HaplotypeScore=112.8950;InbreedingCoeff=-0.2508;MQ=63.00;MQ0=11;MQRankSum=1.878;QD=6.41;ReadPosRankSum=1.256;VQSLOD=3.0351;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,19:43:27.09:484,27,0	./.	./.	0/0:28,0:17:0.89:0,1,2	0/1:8,4:12:13.46:121,0,13	1/1:14,7:23:12.03:160,12,0	0/1:23,15:38:24.96:285,0,25	0/0:30,0:28:1.97:0,2,18	0/1:26,11:38:17.69:154,0,18	0/0:21,0:23:17.39:0,17,152	0/1:13,1:16:33.09:33,0,61	0/1:22,0:21:7.26:43,0,7	0/1:9,8:17:27.60:38,0,28	0/1:11,5:17:20.69:122,0,21	0/1:18,9:27:80.12:116,0,80	0/1:19,4:24:17.69:164,0,18	0/1:25,9:35:99:191,0,137	1/1:14,9:23:11.14:255,11,0	0/0:15,0:15:2.84:0,3,14	0/0:19,0:19:22.95:0,23,105	0/0:44,0:43:17.01:0,17,84	1/1:15,0:16:2.74:12,3,0	0/1:10,2:14:64.77:65,0,65	0/1:34,19:55:99:517,0,110	0/1:15,10:25:14.68:206,0,15	0/1:25,6:31:10.19:245,0,10	0/0:18,0:18:18.35:0,18,95	0/1:15,3:19:87.79:134,0,88
chr10	108047640	.	T	TGCGTGTGCGTGTGC	725.24	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=2.105;DP=719;FS=0.000;HRun=0;HaplotypeScore=260.6697;InbreedingCoeff=0.2985;MQ=61.03;MQ0=12;MQRankSum=-2.985;QD=7.25;ReadPosRankSum=-4.285;VQSLOD=1.4794;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:90.23:0,90,2056	0/0:6,0:6:2.44:0,2,23	0/0:28,0:11:21.17:0,21,485	0/0:26,0:16:36.03:0,36,572	0/0:12,0:12:23.97:0,24,607	0/0:22,0:21:39.09:0,39,808	0/0:38,0:38:78.25:0,78,1877	0/1:32,0:30:21.07:21,0,346	0/0:38,0:38:77.58:0,78,1608	0/0:24,0:24:66.92:0,67,1590	0/0:16,0:16:39.05:0,39,908	1/1:4,13:23:15.05:770,15,0	0/0:17,0:17:26.84:0,27,715	0/0:17,0:17:33.10:0,33,806	0/0:28,0:28:62.98:0,63,1388	0/0:23,0:23:57.17:0,57,1396	0/0:37,0:37:62:0,62,2067	0/1:26,0:26:39.05:39,0,1335	0/1:18,0:18:14.20:14,0,189	0/0:21,0:21:25.60:0,26,534	0/0:47,0:46:23.78:0,24,514	0/0:15,0:15:23.80:0,24,513	0/0:13,0:12:30.02:0,30,807	0/0:55,0:55:99:0,129,3275	0/0:24,0:24:53.92:0,54,1276	0/0:32,0:31:49.05:0,49,1584	0/0:19,0:19:21.58:0,22,450	0/0:18,0:18:51.08:0,51,1099
chr10	108049296	.	TATCC	T	5361.53	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.348;DP=642;FS=0.798;HRun=0;HaplotypeScore=114.4772;InbreedingCoeff=0.9908;MQ=69.83;MQ0=6;MQRankSum=-0.347;QD=32.10;ReadPosRankSum=0.418;VQSLOD=4.9548;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:78.11:0,78,1962	1/1:3,8:11:15.01:221,15,0	0/0:47,0:34:34.99:0,35,808	0/0:36,0:35:58.48:0,58,1255	0/0:11,0:11:27.09:0,27,641	0/0:20,0:20:46.88:0,47,1124	0/0:21,0:21:48.15:0,48,1106	1/1:11,19:29:54.05:700,54,0	0/0:29,0:29:63.22:0,63,1479	0/0:26,0:26:57.19:0,57,1298	0/0:12,0:12:30.09:0,30,688	1/1:4,22:26:51.17:850,51,0	0/0:20,0:20:33.11:0,33,792	0/0:20,0:20:60.17:0,60,1381	0/0:24,0:24:63.05:0,63,1396	0/0:20,0:20:54.19:0,54,1333	0/0:18,0:18:51.16:0,51,1203	0/0:15,0:15:31.92:0,32,747	1/1:5,14:19:38.92:571,39,0	1/1:4,13:17:36.04:530,36,0	1/1:16,36:52:99:1990,120,0	0/0:17,0:17:39.13:0,39,880	0/0:19,0:19:39.11:0,39,855	0/0:29,0:29:69.22:0,69,1611	0/0:12,0:12:30.10:0,30,721	0/0:33,0:33:72.24:0,72,1665	1/1:0,12:12:30.10:501,30,0	0/0:10,0:9:12.02:0,12,246
chr10	108049414	.	CTCAT	C	1255.38	PASS	AB=0.961;AC=8;AF=0.143;AN=56;BaseQRankSum=11.788;DP=606;FS=1.693;HRun=0;HaplotypeScore=127.3402;InbreedingCoeff=0.1196;MQ=56.34;MQ0=4;MQRankSum=-7.463;QD=9.10;ReadPosRankSum=2.848;VQSLOD=3.1161;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.15:0,96,2285	0/1:4,1:5:22.94:97,0,23	0/0:33,0:17:47.90:0,48,697	0/0:33,0:24:58.88:0,59,1002	0/0:10,0:10:30.09:0,30,773	0/0:21,0:21:63.07:0,63,1299	0/0:32,1:33:75.47:0,75,2136	0/1:27,0:26:99:104,0,209	0/0:24,0:24:72.17:0,72,1638	0/0:21,0:21:57.13:0,57,1384	0/0:12,0:12:36.08:0,36,850	0/1:20,0:20:7.12:356,0,7	0/0:22,0:22:64.02:0,64,1677	0/0:18,0:18:54.12:0,54,1169	0/0:28,0:28:81.18:0,81,1979	0/0:22,0:22:66.18:0,66,1682	0/0:22,0:22:66.14:0,66,1556	0/0:14,0:14:20.30:0,20,1050	0/1:20,1:18:99:285,0,123	0/1:12,0:12:3.99:158,0,4	0/1:39,1:39:99:129,0,257	0/0:16,0:16:48.07:0,48,1121	0/0:13,0:13:39.09:0,39,846	0/0:31,0:31:87.38:0,87,1984	0/0:14,0:14:39.05:0,39,755	0/0:37,0:37:99:0,108,2351	1/1:13,0:13:0.48:258,0,0	0/0:8,0:8:24.07:0,24,629
chr10	108049415	.	TCATC	T	2843.52	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.688;DP=600;FS=1.034;HRun=0;HaplotypeScore=121.6083;InbreedingCoeff=0.9856;MQ=57.00;MQ0=4;MQRankSum=-6.357;QD=21.54;ReadPosRankSum=0.596;VQSLOD=3.5649;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:81.13:0,81,1866	1/1:3,2:5:9.03:145,9,0	0/0:34,0:19:33.04:0,33,557	0/0:32,0:24:42.07:0,42,822	0/0:10,0:10:27.09:0,27,667	0/0:21,0:21:42.09:0,42,929	0/0:33,0:33:73.67:0,74,1651	1/1:9,16:24:44.78:488,45,0	0/0:24,0:24:54.17:0,54,1285	0/0:20,0:20:48.15:0,48,1129	0/0:12,0:12:27.09:0,27,643	1/1:8,12:20:48.13:737,48,0	0/0:23,0:23:60.21:0,60,1464	0/0:18,0:18:39.12:0,39,862	0/0:29,0:29:69.24:0,69,1700	0/0:22,0:22:57.20:0,57,1399	0/0:22,0:22:54.15:0,54,1234	0/0:14,0:14:39.13:0,39,891	1/1:10,10:17:33.11:551,33,0	1/1:1,11:12:18.04:301,18,0	1/1:25,12:36:22.90:292,23,0	0/0:15,0:15:39.11:0,39,866	0/0:12,0:12:30.07:0,30,641	0/0:31,0:31:63.58:0,64,1559	0/0:14,0:14:21.07:0,21,519	0/0:36,0:36:74.22:0,74,1709	1/1:4,9:13:33.10:525,33,0	0/0:9,0:9:24.08:0,24,588
chr10	108049505	.	AC	A	4981.92	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.971;DP=722;FS=3.099;HRun=3;HaplotypeScore=125.4907;InbreedingCoeff=0.9997;MQ=66.75;MQ0=0;MQRankSum=-8.349;QD=26.50;ReadPosRankSum=-1.210;VQSLOD=3.6832;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1423	1/1:0,10:10:27.08:330,27,0	0/0:23,0:21:54.14:0,54,710	0/0:43,0:40:85.96:0,86,1320	0/0:13,0:13:33.11:0,33,475	0/0:26,0:26:75.23:0,75,1044	0/0:29,0:29:84.26:0,84,1182	1/1:6,28:33:81.06:960,81,0	0/0:40,0:40:99:0,117,1661	0/0:29,0:29:78.26:0,78,1118	0/0:13,0:13:36.12:0,36,504	1/1:2,21:23:63.07:757,63,0	0/0:20,0:20:60.19:0,60,837	0/0:28,0:28:84.27:0,84,1191	0/0:34,0:34:96.29:0,96,1343	0/0:22,0:22:57.17:0,57,786	0/0:27,0:27:81.26:0,81,1138	0/0:22,0:22:66.22:0,66,935	1/1:2,24:25:68.37:795,68,0	1/1:2,20:22:43.29:500,43,0	1/1:9,46:55:47.31:1114,47,0	0/0:18,0:18:54.18:0,54,777	0/0:15,0:15:44.34:0,44,591	0/0:31,0:31:87.26:0,87,1227	0/0:17,0:17:48.15:0,48,674	0/0:35,0:35:93.31:0,93,1339	1/1:1,17:18:45.05:528,45,0	0/0:14,0:14:39.08:0,39,521
chr10	108049508	.	CA	C	1579.30	PASS	AB=0.957;AC=13;AF=0.232;AN=56;BaseQRankSum=16.588;DP=718;FS=0.359;HRun=1;HaplotypeScore=132.9517;InbreedingCoeff=0.9433;MQ=66.03;MQ0=0;MQRankSum=-6.094;QD=8.54;ReadPosRankSum=-0.562;VQSLOD=0.6517;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,107,1519	1/1:10,0:10:26.21:174,26,0	0/0:23,0:19:54.13:0,54,724	0/0:41,0:38:99:0,103,1486	0/0:14,0:14:38.94:0,39,538	0/0:25,0:25:74.99:0,75,1110	0/0:30,0:30:90.21:0,90,1240	1/1:32,1:32:15.33:279,15,0	0/0:41,0:41:99:0,120,1764	0/0:30,0:30:84.74:0,85,1233	0/0:13,0:13:36.12:0,36,548	1/1:23,0:23:59.47:325,59,0	0/0:21,0:21:63.13:0,63,891	0/0:29,0:29:62.46:0,62,1184	0/0:31,0:31:93.08:0,93,1348	0/0:20,0:20:60.16:0,60,871	0/0:28,0:28:61.37:0,61,1180	0/0:22,0:22:66.20:0,66,983	1/1:24,0:23:53.32:250,53,0	0/1:21,1:22:0.43:134,0,0	1/1:53,2:55:41.17:420,41,0	0/0:18,0:18:54.18:0,54,815	0/0:16,0:16:23.01:0,23,587	0/0:30,0:30:84.17:0,84,1209	0/0:17,0:17:51.14:0,51,736	0/0:36,0:36:95.38:0,95,1419	1/1:18,0:18:17.36:185,17,0	0/0:12,0:12:36.12:0,36,548
chr10	108050169	.	C	CTCAG	2552.76	PASS	AB=1.000;AC=14;AF=0.259;AN=54;BaseQRankSum=-5.030;DP=813;FS=2.802;HRun=0;HaplotypeScore=142.7611;InbreedingCoeff=0.8507;MQ=63.65;MQ0=8;MQRankSum=-0.538;QD=10.46;ReadPosRankSum=-0.387;VQSLOD=3.2524;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:69.15:0,69,953	0/1:12,0:12:0:0,0,0	0/1:37,0:20:0:0,0,0	./.	0/0:14,0:14:15.02:0,15,185	0/0:21,0:23:39.10:0,39,549	0/0:25,0:25:27.06:0,27,367	1/1:38,0:37:5.93:40,6,0	1/1:18,11:32:11.87:280,12,0	0/0:22,0:21:24.02:0,24,342	0/0:16,0:16:15.05:0,15,226	0/0:23,0:23:8.11:0,8,51	0/0:40,0:40:66.11:0,66,859	0/0:27,0:27:33.09:0,33,479	0/0:41,0:41:63.10:0,63,824	0/0:35,0:35:72.18:0,72,1015	0/0:40,0:40:48.14:0,48,704	0/0:39,0:39:51.09:0,51,708	1/1:16,3:19:15.05:344,15,0	1/1:16,0:16:5.99:48,6,0	1/1:65,4:69:43.83:1645,44,0	0/0:29,0:29:24.06:0,24,333	0/0:9,0:8:9.01:0,9,115	0/0:29,0:29:36.05:0,36,462	0/0:23,0:23:27.04:0,27,362	0/0:26,0:26:30.01:0,30,388	1/1:19,2:21:21.05:363,21,0	0/0:13,0:14:15.03:0,15,207
chr10	108050233	.	GTCAA	G	251.37	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=6.528;DP=725;FS=3.083;HRun=0;HaplotypeScore=134.1044;InbreedingCoeff=0.9806;MQ=61.40;MQ0=5;MQRankSum=-4.090;QD=20.95;ReadPosRankSum=-2.011;VQSLOD=3.3689;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,119,2493	./.	0/0:25,0:21:38.44:0,38,444	0/0:17,0:13:18.74:0,19,236	0/0:16,0:16:48:0,48,674	0/0:18,0:18:51.02:0,51,725	0/0:30,0:30:90.14:0,90,1468	0/0:29,0:29:82.49:0,82,915	0/0:35,0:35:81.17:0,81,1699	0/0:26,0:26:77.91:0,78,1420	0/0:11,0:11:27.04:0,27,379	1/1:4,8:11:28.94:345,29,0	0/0:19,0:19:53.09:0,53,837	0/0:29,0:29:78:0,78,1511	0/0:40,0:40:99:0,117,2175	0/0:47,0:46:99:0,136,2158	0/0:35,0:35:85.16:0,85,1971	0/0:33,0:32:69.57:0,70,1446	0/0:25,0:25:71.99:0,72,733	0/0:11,0:11:29.95:0,30,333	0/0:78,0:78:99:0,152,2037	0/0:19,0:19:50.93:0,51,914	0/0:17,0:17:45.08:0,45,761	0/0:41,0:41:99:0,114,2409	0/0:11,0:11:33.07:0,33,649	0/0:24,0:24:63.16:0,63,1245	0/0:14,0:14:32.55:0,33,490	0/0:11,0:11:17.05:0,17,513
chr10	108050237	.	A	ATCAG	2443.85	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=-7.513;DP=742;FS=0.000;HRun=0;HaplotypeScore=137.4723;InbreedingCoeff=0.8690;MQ=60.65;MQ0=6;MQRankSum=0.219;QD=14.63;ReadPosRankSum=-0.999;VQSLOD=3.2009;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:52:84.16:0,84,1246	./.	0/0:25,0:23:3:0,3,28	0/0:18,0:14:3:0,3,25	0/0:19,0:19:21.03:0,21,272	0/0:18,0:18:18.04:0,18,259	0/0:35,0:35:51.04:0,51,619	1/1:32,0:32:26.98:233,27,0	0/0:33,0:33:54.18:0,54,844	0/0:28,0:28:50.76:0,51,654	0/0:10,0:10:12.03:0,12,153	0/0:12,0:11:10.47:0,10,134	0/0:21,0:21:27.05:0,27,358	0/0:27,0:27:45.15:0,45,702	0/0:39,0:39:66.16:0,66,965	0/0:47,0:46:63.18:0,63,936	0/0:35,0:35:72.17:0,72,1033	0/0:30,0:31:45.15:0,45,674	1/1:19,6:24:18.01:257,18,0	1/1:7,4:12:6.02:142,6,0	1/1:31,48:81:67.47:1566,67,0	0/0:19,0:19:36.07:0,36,478	0/0:16,0:16:18.06:0,18,278	0/0:43,0:43:84.21:0,84,1234	0/0:12,0:12:21.06:0,21,309	0/0:23,0:23:42.05:0,42,581	1/1:6,8:16:18.06:411,18,0	0/0:11,0:11:14.98:0,15,206
chr10	108050283	.	CGCTCGCTT	C	1188.96	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.195;DP=740;FS=8.412;HRun=0;HaplotypeScore=195.4678;InbreedingCoeff=0.9272;MQ=64.51;MQ0=0;MQRankSum=-7.120;QD=44.04;ReadPosRankSum=2.996;VQSLOD=2.5838;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,156,5926	1/1:3,0:3:6.02:154,6,0	0/0:23,0:22:42.14:0,42,1379	0/0:19,0:18:12.74:0,13,1342	0/0:19,0:19:57.15:0,57,2140	0/0:17,0:17:51.16:0,51,1858	0/0:39,0:39:99:0,108,4223	0/0:27,0:27:60.19:0,60,2024	0/0:30,0:30:84.22:0,84,3035	0/0:38,0:38:96.05:0,96,3506	0/0:8,0:8:21.07:0,21,824	1/1:8,16:24:45.08:1147,45,0	0/0:29,0:29:87.23:0,87,3426	0/0:32,0:32:93.32:0,93,3654	0/0:35,0:35:96.23:0,96,3612	0/0:32,0:31:87.30:0,87,3542	0/0:30,0:30:87.30:0,87,3429	0/0:28,0:27:81.15:0,81,2981	0/0:20,0:20:54.11:0,54,1889	0/0:10,0:10:27.09:0,27,1051	0/0:69,0:69:99:0,160,6149	0/0:21,0:21:60.18:0,60,2213	0/0:22,0:22:57.20:0,57,2092	0/0:38,0:38:99:0,105,4226	0/0:14,0:14:36.08:0,36,1267	0/0:27,0:27:66.22:0,66,2530	0/0:20,0:20:47.70:0,48,1503	0/0:12,0:12:30.10:0,30,968
chr10	108050287	.	CGCTT	C	588.65	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.562;DP=739;FS=10.130;HRun=0;HaplotypeScore=137.0950;InbreedingCoeff=0.9422;MQ=67.74;MQ0=0;MQRankSum=-6.804;QD=21.80;ReadPosRankSum=3.214;VQSLOD=3.1783;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,156,3798	1/1:3,0:3:6.02:82,6,0	0/0:23,0:22:45.02:0,45,905	0/0:17,0:17:33.17:0,33,842	0/0:19,0:19:57.15:0,57,1431	0/0:19,0:19:54.12:0,54,1192	0/0:39,0:39:99:0,111,2746	0/0:23,0:23:57.18:0,57,1323	0/0:33,0:33:99:0,99,2133	0/0:36,0:36:90.30:0,90,2206	0/0:8,0:8:24.06:0,24,558	1/1:19,5:24:45.10:618,45,0	0/0:30,0:30:87.29:0,87,2249	0/0:33,0:33:99:0,99,2403	0/0:32,0:32:90.29:0,90,2305	0/0:34,0:33:99:0,102,2384	0/0:30,0:30:87.28:0,87,2139	0/0:30,0:29:68.07:0,68,1903	0/0:22,0:21:57.10:0,57,1211	0/0:13,0:13:36.08:0,36,796	0/0:69,0:69:99:0,165,4027	0/0:21,0:21:57.19:0,57,1406	0/0:20,0:20:60.19:0,60,1417	0/0:36,0:36:99:0,108,2693	0/0:15,0:15:42.09:0,42,881	0/0:23,0:23:63.20:0,63,1557	0/0:19,0:19:41.65:0,42,1010	0/0:12,0:12:36.06:0,36,729
chr10	108050339	.	A	AAGGAC	1715.27	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.451;DP=727;FS=4.260;HRun=0;HaplotypeScore=135.5270;InbreedingCoeff=0.9686;MQ=84.63;MQ0=0;MQRankSum=-6.400;QD=53.60;ReadPosRankSum=0.031;VQSLOD=3.9912;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,105,2061	1/1:0,4:6:9.03:275,9,0	0/0:32,0:32:90.27:0,90,1691	0/0:16,0:16:32.30:0,32,718	0/0:13,0:13:30.10:0,30,621	0/0:28,0:28:84.27:0,84,1626	0/0:36,0:36:99:0,99,1923	0/0:32,0:32:87.26:0,87,1567	0/0:29,0:29:87.30:0,87,1779	0/0:35,0:35:96.33:0,96,1972	0/0:10,0:10:30.10:0,30,587	1/1:9,15:26:51.06:1554,51,0	0/0:33,0:33:93.30:0,93,1838	0/0:36,0:36:96.31:0,96,1916	0/0:31,0:31:93.31:0,93,1890	0/0:35,0:35:99:0,102,2102	0/0:21,0:21:63.19:0,63,1251	0/0:30,0:30:81.20:0,81,1524	0/0:21,0:21:60.09:0,60,1110	0/0:15,0:15:42.14:0,42,846	0/0:58,0:58:99:0,172,3337	0/0:20,0:20:51.17:0,51,1056	0/0:17,0:17:51.18:0,51,1057	0/0:28,0:28:81.22:0,81,1599	0/0:16,0:16:45.15:0,45,933	0/0:25,0:25:69.23:0,69,1394	0/0:20,0:20:57.20:0,57,1176	0/0:18,0:18:48.16:0,48,955
chr10	108051098	.	AC	A	5162.65	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=15.829;DP=666;FS=7.870;HRun=1;HaplotypeScore=86.5044;InbreedingCoeff=0.9980;MQ=87.16;MQ0=0;MQRankSum=-2.416;QD=39.41;ReadPosRankSum=-0.144;VQSLOD=4.8886;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,2270	0/0:6,0:6:18.04:0,18,258	0/0:30,0:30:82.35:0,82,1213	0/0:16,0:16:48.02:0,48,700	0/0:22,0:22:66.13:0,66,969	0/0:25,0:25:72.24:0,72,1135	0/0:24,0:24:72.21:0,72,1118	1/1:0,21:21:63.20:864,63,0	0/0:25,0:25:75.21:0,75,1169	0/0:25,0:25:75.26:0,75,1195	0/0:11,0:11:30.10:0,30,476	0/0:26,0:26:75.24:0,75,1173	0/0:20,0:20:57.12:0,57,855	0/0:32,0:32:96.23:0,96,1457	0/0:28,0:28:81.22:0,81,1219	0/0:22,0:22:66.18:0,66,1026	0/0:28,0:28:84.22:0,84,1283	0/0:31,0:30:87.26:0,87,1338	1/1:0,15:15:45.13:611,45,0	1/1:0,14:14:42.14:587,42,0	1/1:0,63:63:99:2430,175,0	0/0:22,0:22:66.23:0,66,1052	0/0:17,0:17:48.16:0,48,765	0/0:20,0:20:60.16:0,60,929	0/0:20,0:20:60.17:0,60,924	0/0:22,0:22:63.21:0,63,1006	1/1:0,18:18:48.16:671,48,0	0/0:14,0:14:39.13:0,39,622
chr10	108051651	.	CG	C	214.85	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.018;DP=710;FS=10.624;HRun=2;HaplotypeScore=77.0513;InbreedingCoeff=0.9972;MQ=83.64;MQ0=0;MQRankSum=-0.765;QD=23.87;ReadPosRankSum=-0.767;VQSLOD=2.1204;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,2300	1/1:0,9:9:24.04:308,24,0	0/0:21,0:21:50.26:0,50,731	0/0:22,0:22:60.17:0,60,887	0/0:13,0:13:36.12:0,36,573	0/0:14,0:14:42.14:0,42,671	0/0:28,0:28:84.26:0,84,1286	0/0:19,0:19:57.19:0,57,885	0/0:27,0:27:78.22:0,78,1218	0/0:16,0:16:48.11:0,48,715	0/0:11,0:11:30.10:0,30,479	0/0:37,0:37:99:0,111,1772	0/0:24,0:24:72.25:0,72,1140	0/0:26,0:26:78.22:0,78,1163	0/0:33,0:33:96.33:0,96,1528	0/0:17,0:17:51.16:0,51,791	0/0:27,0:27:78.21:0,78,1194	0/0:35,0:35:99:0,102,1588	0/0:16,0:16:45.14:0,45,696	0/0:19,0:19:48.16:0,48,760	0/0:91,0:91:99:0,274,4283	0/0:19,0:19:54.18:0,54,857	0/0:18,0:18:51.17:0,51,805	0/0:41,0:41:99:0,123,1912	0/0:20,0:20:60.20:0,60,955	0/0:26,0:26:75.24:0,75,1175	0/0:17,0:17:51.17:0,51,815	0/0:16,0:16:48.16:0,48,767
chr10	108052224	.	T	TG	3900.98	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.303;DP=572;FS=0.000;HRun=3;HaplotypeScore=78.1997;InbreedingCoeff=0.9981;MQ=77.71;MQ0=0;MQRankSum=-8.640;QD=39.40;ReadPosRankSum=1.020;VQSLOD=3.5174;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.32:0,96,1333	1/1:0,6:6:18.06:256,18,0	0/0:18,0:18:54.18:0,54,738	0/0:17,0:17:51.07:0,51,633	0/0:21,0:21:63.21:0,63,881	0/0:25,0:25:72.24:0,72,1006	0/0:31,0:31:90.30:0,90,1258	1/1:0,14:15:36.12:515,36,0	0/0:22,0:22:63.21:0,63,880	0/0:21,0:21:60.20:0,60,831	0/0:13,0:13:39.12:0,39,528	0/0:20,0:20:54.18:0,54,754	0/0:19,0:19:54.18:0,54,752	0/0:24,0:24:69.22:0,69,938	0/0:21,0:21:54.18:0,54,753	0/0:24,0:24:72.24:0,72,1006	0/0:23,0:23:69.21:0,69,939	0/0:34,0:34:99:0,102,1387	1/1:0,9:9:27.09:374,27,0	1/1:0,17:17:51.17:728,51,0	1/1:3,33:36:97.16:1349,97,0	0/0:15,0:15:45.15:0,45,629	0/0:12,0:12:36.12:0,36,499	0/0:24,0:24:72.24:0,72,999	0/0:23,0:23:66.22:0,66,918	0/0:21,0:21:63.21:0,63,874	1/1:0,16:16:48.16:679,48,0	0/0:13,0:13:39.13:0,39,545
chr10	108052577	.	CA	C	5582.46	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.171;DP=662;FS=3.029;HRun=1;HaplotypeScore=76.4288;InbreedingCoeff=0.9988;MQ=79.69;MQ0=0;MQRankSum=-4.765;QD=38.50;ReadPosRankSum=-1.527;VQSLOD=4.8587;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.22:0,84,1290	0/0:7,0:7:21.07:0,21,324	0/0:20,0:20:59.69:0,60,901	0/0:18,0:18:47.92:0,48,654	0/0:18,0:18:51.15:0,51,778	0/0:22,0:22:66.22:0,66,1046	0/0:28,0:28:84.29:0,84,1337	1/1:0,35:35:99:1445,105,0	0/0:23,0:23:69.22:0,69,1078	0/0:32,0:32:93.32:0,93,1487	0/0:12,0:12:30.10:0,30,479	0/0:26,0:26:78.27:0,78,1246	0/0:29,0:29:87.28:0,87,1365	0/0:39,0:39:99:0,117,1810	0/0:34,0:34:99:0,102,1583	0/0:21,0:21:63.20:0,63,984	0/0:29,0:29:84.26:0,84,1308	0/0:19,0:19:57.19:0,57,892	1/1:0,15:15:45.12:601,45,0	1/1:0,10:10:30.10:418,30,0	1/1:0,60:60:99:2219,160,0	0/0:19,0:19:57.15:0,57,882	0/0:13,0:13:39.13:0,39,622	0/0:30,0:30:90.31:0,90,1423	0/0:19,0:19:57.19:0,57,911	0/0:17,0:17:48.15:0,48,745	1/1:0,25:25:66.18:900,66,0	0/0:14,0:14:42.14:0,42,671
chr10	108052695	.	TTCCCCCCCG	T	4426.01	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.688;DP=571;FS=3.122;HRun=0;HaplotypeScore=175.2821;InbreedingCoeff=0.9714;MQ=79.06;MQ0=0;MQRankSum=-9.185;QD=57.48;ReadPosRankSum=0.141;VQSLOD=4.3825;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,4529	0/0:14,0:14:42.12:0,42,1418	0/0:25,0:22:61.66:0,62,1983	0/0:22,0:21:53.47:0,53,1725	0/0:12,0:12:36.12:0,36,1609	0/0:17,0:17:51.18:0,51,2322	0/0:23,0:23:69.24:0,69,2975	1/1:0,14:14:42:987,42,0	0/0:25,0:25:75.24:0,75,3447	0/0:33,0:32:96.32:0,96,4408	0/0:2,0:2:6.02:0,6,217	0/0:30,0:30:90.24:0,90,3904	0/0:25,0:25:75.24:0,75,3503	0/0:28,0:28:84.29:0,84,3854	0/0:21,0:21:63.20:0,63,2874	0/0:16,0:16:48.16:0,48,2142	0/0:24,0:24:72.23:0,72,3129	0/0:33,0:33:99:0,99,4092	1/1:0,9:9:27.03:671,27,0	1/1:0,5:5:14.86:248,15,0	1/1:0,24:24:27.24:593,27,0	0/0:15,0:15:45.15:0,45,1953	0/0:9,0:9:27.09:0,27,1271	0/0:21,0:21:63.20:0,63,2745	0/0:16,0:16:48.16:0,48,2234	0/0:38,0:38:99:0,114,5374	1/1:0,25:25:60.21:1927,60,0	0/0:12,0:12:36.12:0,36,1356
chr10	108052704	.	G	GT	1914.39	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.056;DP=551;FS=0.447;HRun=0;HaplotypeScore=91.2499;InbreedingCoeff=0.9908;MQ=77.68;MQ0=0;MQRankSum=-9.076;QD=18.77;ReadPosRankSum=-1.108;VQSLOD=5.1343;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.31:0,96,1312	1/1:0,11:11:33.11:523,33,0	0/0:24,0:21:30.16:0,30,461	0/0:19,0:18:32.54:0,33,438	0/0:14,0:14:42.14:0,42,577	0/0:17,0:17:48.15:0,48,651	0/0:22,0:22:63.20:0,63,859	1/1:15,3:18:53.71:547,54,0	0/0:21,0:21:63.21:0,63,867	0/0:30,0:30:90.29:0,90,1215	0/0:4,0:4:12.04:0,12,158	0/0:29,0:29:87.19:0,87,1136	0/0:25,0:25:75.25:0,75,1042	0/0:25,0:25:75.25:0,75,1046	0/0:18,0:18:54.17:0,54,737	0/0:13,0:13:39.11:0,39,512	0/0:20,0:20:57.17:0,57,779	0/0:33,0:33:96.28:0,96,1296	1/1:11,3:14:32.36:293,32,0	1/1:5,1:6:17.78:156,18,0	1/1:24,3:27:26.73:226,27,0	0/0:11,0:11:33.11:0,33,459	0/0:9,0:9:27.09:0,27,374	0/0:20,0:20:57.19:0,57,793	0/0:16,0:16:48.15:0,48,652	0/0:39,0:39:99:0,117,1587	1/1:25,1:26:60.13:357,60,0	0/0:8,0:8:24.08:0,24,335
chr10	108053464	.	GCGCA	G	3224.61	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.227;DP=468;FS=17.800;HRun=0;HaplotypeScore=88.2694;InbreedingCoeff=0.8812;MQ=60.53;MQ0=0;MQRankSum=-6.526;QD=33.24;ReadPosRankSum=-0.234;VQSLOD=2.3057;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,2738	0/0:4,0:4:12.01:0,12,281	0/0:15,0:5:6.91:0,7,122	0/0:14,0:7:2.60:0,3,151	0/0:13,0:13:39.09:0,39,1008	0/0:13,0:13:39.13:0,39,1057	0/0:44,0:44:99:0,132,3660	1/1:0,20:20:60.11:1046,60,0	0/0:7,0:7:15.05:0,15,431	0/0:14,0:14:42.14:0,42,1176	0/0:6,0:6:18.06:0,18,471	0/0:11,0:11:33.11:0,33,939	0/0:8,0:8:24.08:0,24,627	0/0:17,0:17:48.05:0,48,1159	0/0:13,0:13:39.08:0,39,931	0/0:6,0:6:18.06:0,18,518	0/0:34,0:34:99:0,99,2768	0/0:24,0:24:66.17:0,66,1728	1/1:0,15:15:42.06:714,42,0	1/1:1,5:6:2.92:63,3,0	1/1:0,41:41:45.64:941,46,0	0/0:14,0:14:36.11:0,36,931	0/0:7,0:7:21.04:0,21,482	0/0:36,0:36:96.24:0,96,2742	0/0:18,0:18:51.08:0,51,1394	0/0:11,0:11:30.09:0,30,777	1/1:0,15:15:30.10:628,30,0	0/0:8,0:8:24.08:0,24,578
chr10	108053485	.	AAC	A	274.60	PASS	AB=0.918;AC=15;AF=0.288;AN=52;BaseQRankSum=2.735;DP=460;FS=2.806;HRun=0;HaplotypeScore=80.1963;InbreedingCoeff=-0.2890;MQ=55.81;MQ0=6;MQRankSum=0.681;QD=1.37;ReadPosRankSum=-0.554;VQSLOD=0.9863;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:18.45:0,18,308	0/0:3,0:4:0.70:0,1,22	./.	./.	0/0:12,1:12:5.99:0,6,64	0/1:11,0:11:1.55:2,0,214	0/1:30,1:32:80.66:81,0,191	0/1:20,0:20:13.81:14,0,14	1/1:4,2:6:3.01:33,3,0	0/0:11,0:11:8.98:0,9,74	0/1:7,1:8:34.23:34,0,116	0/0:9,0:8:12.04:0,12,177	0/1:7,0:7:16.56:17,0,39	0/0:11,0:11:12.02:0,12,148	0/0:10,0:10:6.02:0,6,89	0/0:6,0:6:6:0,6,89	0/0:35,1:36:24.49:0,24,654	0/1:22,5:28:46.52:47,0,494	0/1:13,0:13:8.03:8,0,43	0/1:6,1:7:23.90:24,0,37	0/0:37,0:35:11.87:0,12,178	0/0:14,0:14:24.08:0,24,356	0/1:6,1:7:23.49:23,0,80	0/0:41,3:44:45.25:0,45,909	0/1:15,3:18:37.94:38,0,281	0/1:15,0:16:71.96:72,0,89	0/1:18,2:20:14.85:15,0,117	0/1:6,2:8:11.53:12,0,218
chr10	108053683	.	GCA	G	433.72	PASS	AB=0.940;AC=12;AF=0.222;AN=54;BaseQRankSum=4.481;DP=385;FS=2.598;HRun=0;HaplotypeScore=56.0632;InbreedingCoeff=0.5178;MQ=76.09;MQ0=3;MQRankSum=-2.174;QD=4.38;ReadPosRankSum=-2.324;VQSLOD=1.8344;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:32:3.24:0,3,1019	0/0:6,0:6:12.04:0,12,199	0/0:22,0:12:15.04:0,15,233	0/1:31,0:16:14.14:14,0,116	0/0:11,0:11:27.09:0,27,433	0/1:12,1:13:1.80:2,0,457	0/0:20,2:22:22.45:0,22,877	1/1:1,9:10:24.04:265,24,0	0/0:11,0:11:24.08:0,24,398	0/0:14,0:14:39.13:0,39,646	0/0:10,0:10:23.99:0,24,395	0/0:12,0:12:27.05:0,27,390	0/1:7,1:8:32.60:33,0,273	0/0:7,0:7:18.03:0,18,270	0/0:11,0:11:18.06:0,18,299	0/0:7,0:7:21.06:0,21,322	0/0:33,0:33:87.25:0,87,1414	0/0:17,0:17:45.11:0,45,699	1/1:3,2:5:8.93:76,9,0	./.	1/1:5,3:8:6.02:76,6,0	0/1:15,1:16:7.75:8,0,418	0/0:13,0:13:36.12:0,36,597	0/0:26,1:27:34.41:0,34,1101	0/0:7,0:7:21.07:0,21,343	0/0:16,0:16:42.13:0,42,655	1/1:7,1:8:11.11:117,11,0	0/0:6,0:6:9.03:0,9,150
chr10	108053899	.	A	AT	3562.23	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.213;DP=573;FS=5.753;HRun=0;HaplotypeScore=66.7143;InbreedingCoeff=0.9578;MQ=84.54;MQ0=0;MQRankSum=-2.069;QD=32.38;ReadPosRankSum=-3.079;VQSLOD=2.2192;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,1843	1/1:2,2:4:11.85:111,12,0	0/0:25,0:25:68.13:0,68,826	0/0:27,0:27:63.21:0,63,915	0/0:17,0:17:42.14:0,42,584	0/0:16,0:16:48.16:0,48,671	0/0:31,0:31:90.30:0,90,1257	1/1:2,24:27:74.65:950,75,0	0/0:16,0:16:48.16:0,48,668	0/0:14,0:14:42.14:0,42,587	0/0:15,0:15:45.15:0,45,629	0/0:21,0:21:60.20:0,60,838	0/0:22,0:22:66.21:0,66,903	0/0:17,0:17:48.16:0,48,670	0/0:32,0:32:93.28:0,93,1262	0/0:12,0:12:36.12:0,36,501	0/0:15,0:15:45.15:0,45,628	0/0:23,0:23:69.21:0,69,941	1/1:3,26:29:74.18:927,74,0	1/1:0,11:11:33.10:401,33,0	1/1:2,24:26:69.22:870,69,0	0/0:14,0:14:42.14:0,42,586	0/0:11,0:11:33.11:0,33,451	0/0:35,0:35:99:0,102,1421	0/0:17,0:17:51.17:0,51,699	0/0:23,0:23:69.22:0,69,945	1/1:4,9:13:3.16:303,3,0	0/0:16,0:16:48.16:0,48,667
chr10	108054218	.	TC	T	5053.51	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.189;DP=616;FS=1.696;HRun=1;HaplotypeScore=61.5864;InbreedingCoeff=0.9995;MQ=87.14;MQ0=0;MQRankSum=-1.110;QD=39.79;ReadPosRankSum=-1.926;VQSLOD=4.7045;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,2034	1/1:0,9:9:24.08:336,24,0	0/0:16,0:16:48.15:0,48,721	0/0:25,0:25:72.05:0,72,1028	0/0:15,0:15:45.15:0,45,719	0/0:13,0:13:36.12:0,36,558	0/0:34,0:34:99:0,102,1535	1/1:0,21:21:63.21:880,63,0	0/0:27,0:27:81.28:0,81,1288	0/0:18,0:18:54.18:0,54,864	0/0:19,0:19:57.18:0,57,876	0/0:23,0:23:69.24:0,69,1102	0/0:14,0:14:42.14:0,42,671	0/0:27,0:27:81.28:0,81,1293	0/0:22,0:22:66.21:0,66,1032	0/0:13,0:13:39.13:0,39,624	0/0:30,0:30:90.31:0,90,1439	0/0:25,0:25:75.26:0,75,1190	1/1:0,20:20:60.19:819,60,0	1/1:0,14:14:39.13:545,39,0	1/1:0,42:42:99:1677,120,0	0/0:21,0:21:60.20:0,60,950	0/0:15,0:15:45.15:0,45,719	0/0:26,0:26:78.27:0,78,1247	0/0:21,0:21:63.21:0,63,1007	0/0:28,0:28:84.28:0,84,1321	1/1:0,21:21:57.19:796,57,0	0/0:13,0:13:36.12:0,36,576
chr10	108055287	.	TGTGTGTGCGTGC	T	116.27	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=5.052;DP=642;FS=32.654;HRun=0;HaplotypeScore=211.1989;InbreedingCoeff=0.4444;MQ=64.93;MQ0=18;MQRankSum=-1.223;QD=1.25;ReadPosRankSum=-0.685;VQSLOD=0.9397;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:48.16:0,48,1657	1/1:3,0:3:3.01:39,3,0	0/0:41,0:20:17.07:0,17,384	0/0:49,0:23:56.03:0,56,774	0/0:11,0:11:24.08:0,24,884	0/0:17,0:17:45.15:0,45,2201	0/0:26,0:26:60.18:0,60,2042	0/0:31,0:31:3.40:0,3,484	0/0:18,0:18:48.11:0,48,1630	0/0:20,0:20:57.08:0,57,1414	0/0:7,0:7:14.41:0,14,516	0/0:30,0:30:3.99:0,4,413	0/0:27,0:26:63.49:0,63,1862	0/0:25,0:25:57.06:0,57,1683	0/0:16,0:16:30.06:0,30,1225	0/0:19,0:19:42.14:0,42,1557	0/0:19,0:18:33.10:0,33,1387	0/0:32,0:31:42.90:0,43,2867	0/0:25,0:25:7.46:0,7,812	1/1:4,6:9:6.02:168,6,0	0/1:80,0:78:15.65:16,0,1800	0/0:10,0:10:30.10:0,30,997	0/0:8,0:8:18.06:0,18,466	0/0:40,0:40:93.30:0,93,3890	0/0:9,0:9:18.06:0,18,950	0/0:18,0:17:48.07:0,48,1485	0/0:18,0:17:0.96:0,1,423	0/0:4,0:4:9.03:0,9,449
chr10	108055295	.	C	CGT	609.27	PASS	AB=0.955;AC=6;AF=0.107;AN=56;BaseQRankSum=4.930;DP=619;FS=15.276;HRun=0;HaplotypeScore=105.2832;InbreedingCoeff=0.5464;MQ=57.65;MQ0=19;MQRankSum=0.564;QD=4.35;ReadPosRankSum=-3.272;VQSLOD=0.9545;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:54.63:0,55,729	0/0:3,0:3:1.53:0,2,4	0/0:33,0:12:21.02:0,21,322	0/0:47,0:21:27.17:0,27,584	0/0:15,0:15:32.97:0,33,367	0/0:16,0:16:45.14:0,45,610	0/0:32,0:31:75.06:0,75,1001	0/1:26,0:26:30.04:75,0,30	0/0:18,0:18:48.13:0,48,619	0/0:20,0:20:42.88:0,43,531	0/0:8,0:8:15.05:0,15,207	0/0:26,0:26:44.56:0,45,497	0/0:25,0:24:62.12:0,62,727	0/0:22,0:22:35.37:0,35,553	0/0:13,0:13:27.09:0,27,378	0/0:21,0:21:44.95:0,45,592	0/0:18,0:17:32.77:0,33,400	0/0:28,0:29:79.34:0,79,1005	0/1:18,2:19:11.38:124,0,11	0/0:8,0:7:5.72:0,6,29	1/1:73,3:74:9.51:399,10,0	0/0:11,0:11:28.89:0,29,343	0/0:7,0:7:18.06:0,18,233	0/0:42,0:42:94.10:0,94,1255	0/0:11,0:11:21.07:0,21,294	0/0:20,0:19:43.22:0,43,592	1/1:18,0:17:14.01:139,14,0	0/0:5,0:5:9.03:0,9,125
chr10	108055299	.	CGT	C	430.47	PASS	AB=0.873;AC=19;AF=0.365;AN=52;BaseQRankSum=4.471;DP=606;FS=7.013;HRun=0;HaplotypeScore=93.5353;InbreedingCoeff=-0.3257;MQ=56.86;MQ0=22;MQRankSum=1.480;QD=1.37;ReadPosRankSum=2.288;VQSLOD=0.5780;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,6:28:86.59:87,0,243	0/0:5,0:5:2.91:0,3,25	./.	./.	0/1:13,3:16:9.79:10,0,233	0/1:15,2:17:27.70:28,0,446	0/0:38,0:37:14.33:0,14,886	0/0:23,0:23:5.96:0,6,44	0/1:19,0:19:3.58:4,0,345	0/0:14,0:14:21.02:0,21,287	0/0:8,1:9:8.81:0,9,133	1/1:11,0:23:0.51:64,1,0	0/1:18,1:19:20.69:21,0,258	0/0:19,0:20:27.01:0,27,343	0/1:9,3:12:21.61:22,0,125	0/1:19,1:20:5.68:6,0,310	0/1:15,4:18:7.06:7,0,302	0/1:26,4:30:92.47:92,0,395	0/0:20,0:19:18.03:0,18,200	1/1:8,0:7:0.94:10,1,0	0/0:73,0:71:39.04:0,39,318	0/1:9,2:11:15.08:15,0,119	0/1:6,0:7:5.08:5,0,82	0/1:36,5:42:99:164,0,803	0/1:11,2:12:12.60:13,0,229	0/1:19,1:19:3.76:4,0,324	0/0:12,0:11:6:0,6,51	0/1:3,2:5:21.62:22,0,122
chr10	108055428	.	GTTGT	G	1179.10	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=3.317;DP=442;FS=2.038;HRun=0;HaplotypeScore=72.6132;InbreedingCoeff=0.8289;MQ=75.34;MQ0=8;MQRankSum=1.849;QD=16.38;ReadPosRankSum=0.900;VQSLOD=3.3954;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:55.86:0,56,662	0/0:8,0:8:0.60:0,1,15	0/0:36,0:14:21.83:0,22,296	0/0:26,0:12:25.72:0,26,172	0/0:17,0:17:33.79:0,34,364	0/0:12,0:12:30.01:0,30,357	0/0:17,0:17:28.35:0,28,462	1/1:1,11:13:32.97:330,33,0	0/0:19,0:19:28.84:0,29,655	0/0:24,0:24:63.24:0,63,763	0/0:16,0:16:36.49:0,36,455	0/1:12,0:12:29.30:29,0,122	0/0:12,0:11:29.11:0,29,268	0/0:12,0:12:29.90:0,30,347	0/0:16,0:16:39.46:0,39,565	0/0:14,0:14:31.03:0,31,357	0/0:13,0:12:32.90:0,33,421	0/0:16,0:16:38.56:0,39,639	1/1:2,10:12:14.46:238,14,0	1/1:8,1:9:23.95:223,24,0	1/1:8,1:9:14.05:158,14,0	0/0:11,0:11:30.03:0,30,359	0/0:8,0:8:24.04:0,24,382	0/0:20,0:20:50.83:0,51,704	0/0:11,0:11:29.97:0,30,394	0/0:22,0:22:53.33:0,53,641	1/1:14,1:17:32.88:376,33,0	0/0:15,0:13:39.01:0,39,447
chr10	108055737	.	GCT	G	274.31	PASS	AB=0.945;AC=17;AF=0.315;AN=54;BaseQRankSum=8.797;DP=519;FS=7.126;HRun=0;HaplotypeScore=69.8714;InbreedingCoeff=-0.0941;MQ=70.71;MQ0=15;MQRankSum=0.146;QD=1.01;ReadPosRankSum=-0.391;VQSLOD=0.5964;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,3:42:17:0,17,1146	./.	0/0:26,1:10:6.02:0,6,78	0/0:40,0:20:15.54:0,16,140	0/1:11,2:13:17.09:17,0,217	0/0:21,0:21:48.15:0,48,730	0/1:12,2:14:37.24:37,0,384	0/1:38,0:36:21.04:21,0,142	0/0:12,0:12:21.07:0,21,314	0/0:17,0:16:7.14:0,7,516	0/0:5,0:4:9.03:0,9,140	1/1:5,0:16:17.04:84,17,0	0/1:11,2:13:37.19:37,0,360	0/1:14,0:14:11.05:11,0,206	0/1:17,1:18:2.06:2,0,431	0/1:14,1:15:8.12:8,0,303	0/0:24,1:25:9.99:0,10,622	0/1:17,2:19:25.19:25,0,564	0/1:19,0:17:13.34:46,0,13	0/1:16,0:15:13.56:14,0,36	0/1:33,0:32:23.10:52,0,23	0/0:9,0:9:18.06:0,18,276	0/0:4,0:4:12.04:0,12,189	0/0:26,0:26:63.18:0,63,933	0/1:12,1:12:8:8,0,350	0/0:17,0:17:33.99:0,34,484	1/1:9,0:9:16.20:68,16,0	0/1:20,1:20:3.39:3,0,375
chr10	108055757	.	TCTCTCC	T	1301.24	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=7.069;DP=530;FS=14.126;HRun=0;HaplotypeScore=104.1509;InbreedingCoeff=0.8557;MQ=64.73;MQ0=18;MQRankSum=-0.360;QD=10.49;ReadPosRankSum=-2.029;VQSLOD=1.2023;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,113,2930	1/1:4,0:4:8.98:73,9,0	0/0:24,0:6:11.04:0,11,111	0/0:45,0:21:18.34:0,18,253	0/0:10,0:10:24.81:0,25,529	0/0:23,0:23:66.16:0,66,1809	0/0:14,0:14:42.12:0,42,1045	1/1:6,32:36:68.32:960,68,0	0/0:10,0:10:24.07:0,24,749	0/0:24,0:22:60.15:0,60,1374	0/0:10,0:9:26.46:0,26,432	0/0:14,0:14:20.36:0,20,134	0/0:12,0:12:33.11:0,33,962	0/0:13,0:13:12.79:0,13,508	0/0:16,0:16:47.87:0,48,1100	0/0:12,0:12:33.11:0,33,876	0/0:19,0:19:57.11:0,57,1564	0/0:16,0:16:48.10:0,48,1375	1/1:21,0:19:33.52:222,34,0	0/1:13,0:12:13.54:28,0,14	1/1:36,0:35:18.17:71,18,0	0/0:7,0:7:21.07:0,21,710	0/0:7,0:7:21.06:0,21,554	0/0:26,0:26:75.18:0,75,1790	0/0:14,0:13:37.24:0,37,977	0/0:22,0:21:56.37:0,56,1289	1/1:11,1:12:15.99:120,16,0	0/0:21,0:20:46.22:0,46,980
chr10	108055759	.	TCTCC	T	2041.88	PASS	AB=0.795;AC=12;AF=0.214;AN=56;BaseQRankSum=7.627;DP=523;FS=13.086;HRun=0;HaplotypeScore=83.5669;InbreedingCoeff=0.7894;MQ=65.05;MQ0=17;MQRankSum=-0.526;QD=15.13;ReadPosRankSum=-1.651;VQSLOD=1.8578;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,112,2216	1/1:5,0:5:11.98:97,12,0	0/0:25,0:7:14.05:0,14,146	0/0:42,0:20:15.45:0,15,204	0/0:12,0:12:30.77:0,31,458	0/0:22,0:22:66.16:0,66,1437	0/0:14,0:14:42.08:0,42,839	1/1:37,0:35:36.74:638,37,0	0/0:10,0:10:24.08:0,24,586	0/0:23,0:21:60.09:0,60,1063	0/0:10,0:9:26.46:0,26,360	0/1:14,0:14:30.05:113,0,30	0/0:12,0:12:33.07:0,33,735	0/0:14,0:14:16.23:0,16,411	0/0:17,0:17:50.88:0,51,942	0/0:12,0:12:33.09:0,33,683	0/0:19,0:19:57.08:0,57,1194	0/0:16,0:16:48.03:0,48,1043	1/1:14,6:18:36.07:502,36,0	0/1:4,9:12:6.47:156,0,6	1/1:5,30:34:21.07:397,21,0	0/0:7,0:7:21.07:0,21,542	0/0:7,0:7:21.06:0,21,456	0/0:27,0:27:78.15:0,78,1505	0/0:14,0:13:37.22:0,37,737	0/0:21,0:20:55.50:0,56,1009	1/1:1,10:11:18.06:318,18,0	0/0:21,0:20:44.99:0,45,762
chr10	108055925	.	AATATATATAT	A	2684.57	PASS	AB=1.000;AC=11;AF=0.229;AN=48;BaseQRankSum=7.445;DP=222;FS=1.531;HRun=0;HaplotypeScore=70.6793;InbreedingCoeff=0.6285;MQ=71.03;MQ0=1;MQRankSum=-5.899;QD=42.61;ReadPosRankSum=-3.229;VQSLOD=2.8615;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:18:39.12:0,39,1646	0/0:2,0:5:8.37:0,8,69	0/1:9,0:6:1.81:2,0,113	0/0:9,0:6:2.99:0,3,24	0/0:9,0:10:15.05:0,15,733	0/0:6,0:6:15.05:0,15,656	./.	1/1:4,23:27:69.15:1611,69,0	0/0:5,0:5:9.03:0,9,460	0/0:5,0:7:18.06:0,18,682	./.	1/1:3,0:6:6.01:59,6,0	0/0:4,0:4:9.03:0,9,375	0/0:1,0:1:3.01:0,3,154	0/0:6,0:6:9.03:0,9,461	0/0:2,0:2:3.01:0,3,153	0/0:29,0:30:84.29:0,84,3937	0/0:15,0:15:45.15:0,45,2245	1/1:4,5:9:15.04:357,15,0	1/1:4,0:4:6.02:149,6,0	./.	./.	0/0:4,0:4:6.02:0,6,307	0/0:4,0:4:3.01:0,3,153	0/0:9,0:9:24.08:0,24,1065	0/0:2,0:2:3.01:0,3,154	1/1:1,7:8:21.07:656,21,0	0/0:15,0:17:42.14:0,42,2086
chr10	108056515	.	T	TG	5395.74	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-14.123;DP=681;FS=1.590;HRun=3;HaplotypeScore=61.9434;InbreedingCoeff=0.9876;MQ=86.24;MQ0=0;MQRankSum=-2.781;QD=36.46;ReadPosRankSum=-1.341;VQSLOD=4.8849;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,1522	1/1:0,3:3:9.03:126,9,0	0/0:25,0:25:66.20:0,66,791	0/0:22,0:22:63.18:0,63,734	0/0:15,0:15:33.10:0,33,396	0/0:16,0:16:42.13:0,42,504	0/0:35,0:35:99:0,99,1176	1/1:2,17:19:51.16:697,51,0	0/0:24,0:24:69.21:0,69,828	0/0:18,0:18:44.94:0,45,539	0/0:10,0:10:27.08:0,27,324	0/0:28,0:28:81.24:0,81,961	0/0:31,0:31:90.28:0,90,1080	0/0:26,0:26:75.22:0,75,889	0/0:25,0:25:66.20:0,66,792	0/0:25,0:25:75.23:0,75,900	0/0:37,0:37:99:0,111,1332	0/0:32,0:32:90.28:0,90,1079	1/1:3,19:22:60.20:837,60,0	1/1:2,18:20:51.17:714,51,0	1/1:3,60:63:99:2393,172,0	0/0:13,0:13:36.11:0,36,432	0/0:16,0:16:45.14:0,45,540	0/0:40,0:40:99:0,111,1332	0/0:19,0:19:54.17:0,54,647	0/0:23,0:23:66.20:0,66,791	1/1:2,19:21:45.15:629,45,0	0/0:10,0:10:27.08:0,27,324
chr10	108056801	.	CAG	C	362.16	PASS	AB=0.927;AC=17;AF=0.354;AN=48;BaseQRankSum=3.613;DP=541;FS=6.160;HRun=0;HaplotypeScore=66.0350;InbreedingCoeff=-0.3945;MQ=54.78;MQ0=24;MQRankSum=0.048;QD=1.30;ReadPosRankSum=-0.769;VQSLOD=0.8462;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,1:37:44.71:45,0,323	./.	./.	./.	0/0:11,0:10:3.01:0,3,42	0/1:14,3:16:28.08:28,0,51	0/1:17,1:18:11.70:12,0,222	0/0:31,0:30:12:0,12,132	0/1:21,0:20:7.25:7,0,202	0/1:18,0:17:36.62:49,0,37	./.	1/1:14,0:19:5.34:23,5,0	0/1:16,1:17:20.99:21,0,89	0/0:14,0:14:12.04:0,12,178	0/0:18,0:18:27.06:0,27,347	0/1:14,2:16:5.62:6,0,308	0/1:20,4:23:99:116,0,183	0/1:15,2:16:11.77:12,0,176	0/1:16,0:17:5.72:6,0,211	0/1:2,1:4:20.20:27,0,20	0/0:28,0:35:21.03:0,21,240	0/1:10,0:10:49.93:53,0,50	0/0:12,0:12:12.04:0,12,179	0/0:29,4:32:6.42:0,6,490	0/1:10,0:9:20.70:21,0,120	0/1:20,0:20:26.63:27,0,39	0/0:16,1:20:14.99:0,15,176	0/1:7,2:8:53.31:53,0,73
chr10	108056992	.	AGTGT	A	1487.51	PASS	AB=0.889;AC=12;AF=0.222;AN=54;BaseQRankSum=0.621;DP=531;FS=2.161;HRun=0;HaplotypeScore=129.5886;InbreedingCoeff=0.5214;MQ=64.86;MQ0=2;MQRankSum=0.176;QD=10.05;ReadPosRankSum=1.627;VQSLOD=3.1601;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:26:3.35:0,3,881	0/0:7,0:7:9.02:0,9,148	./.	0/0:25,0:20:2.98:0,3,21	0/0:12,0:12:18.02:0,18,241	0/1:14,0:13:24.58:25,0,361	0/0:15,0:17:26.27:0,26,387	0/1:18,6:24:0.86:149,0,1	0/0:15,0:15:24.05:0,24,431	0/0:19,0:19:40.64:0,41,758	0/0:8,0:8:20.87:0,21,467	0/0:19,0:20:6.02:0,6,91	0/1:8,1:11:23.93:24,0,396	0/0:28,1:30:47.96:0,48,1250	0/0:5,0:10:24.08:0,24,454	0/0:20,0:24:56.45:0,56,999	0/0:31,0:33:47.56:0,48,928	0/0:33,0:36:67.68:0,68,1216	1/1:11,1:11:6.02:85,6,0	1/1:9,6:15:24.05:336,24,0	1/1:22,10:32:36.06:502,36,0	0/0:14,0:14:27.07:0,27,507	0/0:4,0:5:5.75:0,6,84	0/0:25,0:25:62.89:0,63,1313	0/0:14,0:14:18.06:0,18,384	0/1:18,1:20:5.92:6,0,578	1/1:8,10:20:36.11:524,36,0	0/0:11,0:12:14.75:0,15,202
chr10	108057390	.	TAGACACAC	T	554.76	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.398;DP=650;FS=9.425;HRun=0;HaplotypeScore=161.9301;InbreedingCoeff=0.9913;MQ=76.73;MQ0=1;MQRankSum=-2.969;QD=42.67;ReadPosRankSum=-1.290;VQSLOD=2.8165;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:72.25:0,72,2730	1/1:5,8:13:27.09:649,27,0	0/0:33,0:29:51.17:0,51,1688	0/0:42,0:37:66.40:0,66,2455	0/0:16,0:16:42.14:0,42,1601	0/0:20,0:20:42.14:0,42,1608	0/0:40,0:40:90.29:0,90,3219	0/0:25,0:25:45.15:0,45,1556	0/0:17,0:17:45.15:0,45,1797	0/0:24,0:24:51.17:0,51,1856	0/0:10,0:10:24.08:0,24,836	0/0:22,0:22:54.14:0,54,1841	0/0:17,0:17:45.15:0,45,1651	0/0:22,0:22:57.19:0,57,2148	0/0:22,0:22:57.18:0,57,2144	0/0:19,0:19:57.16:0,57,2121	0/0:31,0:31:72.25:0,72,2907	0/0:29,0:29:66.23:0,66,2616	0/0:29,0:29:58.42:0,58,1998	0/0:13,0:13:21.07:0,21,798	0/0:40,0:40:99:0,105,3734	0/0:20,0:20:42.12:0,42,1433	0/0:19,0:19:45.15:0,45,1574	0/0:31,0:31:78.27:0,78,3100	0/0:13,0:13:30.10:0,30,1134	0/0:20,0:20:51.18:0,51,1816	0/0:24,0:24:51.18:0,51,2009	0/0:10,0:10:27.09:0,27,1039
chr10	108057456	.	TC	T	329.92	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.187;DP=674;FS=14.403;HRun=2;HaplotypeScore=74.3074;InbreedingCoeff=0.9992;MQ=86.92;MQ0=0;MQRankSum=-3.769;QD=29.99;ReadPosRankSum=-0.095;VQSLOD=1.9346;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,1671	1/1:0,11:11:33.11:425,33,0	0/0:38,0:35:99:0,102,1342	0/0:31,0:31:85.19:0,85,1178	0/0:23,0:23:66.22:0,66,988	0/0:11,0:11:33.11:0,33,493	0/0:22,0:22:60.20:0,60,899	0/0:29,0:29:87.29:0,87,1286	0/0:17,0:17:48.16:0,48,719	0/0:16,0:16:42.14:0,42,628	0/0:15,0:15:39.13:0,39,581	0/0:16,0:16:48.16:0,48,720	0/0:14,0:14:39.13:0,39,585	0/0:23,0:23:66.22:0,66,989	0/0:28,0:28:84.24:0,84,1216	0/0:24,0:24:69.22:0,69,1014	0/0:33,0:33:99:0,99,1473	0/0:34,0:34:99:0,99,1448	0/0:23,0:23:66.20:0,66,964	0/0:17,0:17:51.16:0,51,742	0/0:45,0:45:99:0,126,1842	0/0:19,0:19:57.18:0,57,833	0/0:20,0:20:60.20:0,60,898	0/0:32,0:32:96.28:0,96,1412	0/0:23,0:23:66.22:0,66,978	0/0:35,0:35:99:0,105,1573	0/0:20,0:20:57.19:0,57,854	0/0:12,0:12:36.12:0,36,540
chr10	108057942	.	TTA	T	63.27	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.425;DP=641;FS=0.000;HRun=0;HaplotypeScore=75.0233;InbreedingCoeff=0.9391;MQ=96.18;MQ0=0;MQRankSum=-1.435;QD=15.82;ReadPosRankSum=0.988;VQSLOD=2.9475;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.31:0,90,1826	1/1:0,4:4:9.03:146,9,0	0/0:33,0:33:79.43:0,79,1790	0/0:29,0:29:87.26:0,87,1656	0/0:18,0:18:54.19:0,54,1080	0/0:22,0:22:66.23:0,66,1324	0/0:22,0:22:66.23:0,66,1323	0/0:27,0:27:81.28:0,81,1612	0/0:26,0:26:78.27:0,78,1531	0/0:25,0:25:75.26:0,75,1513	0/0:20,0:20:59.21:0,59,1093	0/0:25,0:25:75.24:0,75,1488	0/0:24,0:24:72.25:0,72,1443	0/0:37,0:37:99:0,111,2253	0/0:26,0:26:78.25:0,78,1532	0/0:14,0:14:42.14:0,42,853	0/0:28,0:28:84.29:0,84,1680	0/0:18,0:18:54.19:0,54,1080	0/0:22,0:22:63.22:0,63,1280	0/0:17,0:17:48.16:0,48,975	0/0:21,0:21:63.21:0,63,1228	0/0:19,0:19:57.20:0,57,1158	0/0:20,0:20:57.20:0,57,1140	0/0:32,0:32:96.33:0,96,1914	0/0:21,0:21:63.22:0,63,1280	0/0:23,0:23:69.24:0,69,1402	0/0:19,0:19:57.20:0,57,1157	0/0:19,0:19:57.20:0,57,1158
chr10	108057971	.	GGCTGTTA	G	137.12	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.901;DP=681;FS=6.027;HRun=0;HaplotypeScore=153.0721;InbreedingCoeff=0.9386;MQ=90.78;MQ0=0;MQRankSum=-2.939;QD=22.85;ReadPosRankSum=-0.214;VQSLOD=3.0622;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.31:0,96,3604	1/1:1,5:6:9.03:220,9,0	0/0:28,0:28:60.14:0,60,1949	0/0:25,0:25:53.87:0,54,1683	0/0:24,0:24:63.22:0,63,2273	0/0:23,0:23:60.21:0,60,2266	0/0:33,0:33:96.33:0,96,3451	0/0:34,0:34:75.25:0,75,2666	0/0:27,0:27:78.27:0,78,2974	0/0:27,0:27:66.23:0,66,2501	0/0:16,0:16:39.13:0,39,1480	0/0:26,0:26:75.24:0,75,2654	0/0:21,0:21:51.17:0,51,1918	0/0:31,0:31:78.27:0,78,2920	0/0:29,0:29:78.23:0,78,2867	0/0:24,0:24:69.24:0,69,2657	0/0:27,0:27:75.26:0,75,2889	0/0:16,0:16:45.15:0,45,1687	0/0:23,0:23:48.16:0,48,1686	0/0:17,0:17:39.13:0,39,1434	0/0:28,0:28:63.22:0,63,2425	0/0:22,0:22:60.21:0,60,2249	0/0:20,0:20:39.13:0,39,1358	0/0:39,0:39:99:0,105,4019	0/0:25,0:25:63.22:0,63,2326	0/0:21,0:21:54.19:0,54,2010	0/0:19,0:19:51.18:0,51,1920	0/0:14,0:14:33.11:0,33,1261
chr10	108058290	.	CA	C	106.27	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.489;DP=661;FS=6.828;HRun=2;HaplotypeScore=60.3011;InbreedingCoeff=0.9807;MQ=73.43;MQ0=0;MQRankSum=-2.228;QD=21.25;ReadPosRankSum=-1.331;VQSLOD=2.7633;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1686	1/1:0,5:5:15.05:195,15,0	0/0:16,0:14:39.09:0,39,560	0/0:16,0:15:44.16:0,44,594	0/0:17,0:17:51.17:0,51,764	0/0:14,0:14:39.13:0,39,585	0/0:26,0:26:75.23:0,75,1102	0/0:24,0:24:69.22:0,69,1000	0/0:16,0:16:48.16:0,48,719	0/0:27,0:27:75.25:0,75,1124	0/0:8,0:8:24.08:0,24,359	0/0:35,0:35:99:0,105,1571	0/0:15,0:15:42.14:0,42,630	0/0:23,0:23:69.23:0,69,1034	0/0:29,0:29:87.26:0,87,1246	0/0:17,0:17:51.17:0,51,763	0/0:38,0:38:99:0,114,1689	0/0:45,0:45:99:0,135,1995	0/0:16,0:16:48.16:0,48,719	0/0:17,0:17:51.17:0,51,764	0/0:48,0:48:99:0,144,2155	0/0:16,0:16:48.16:0,48,719	0/0:21,0:21:63.21:0,63,941	0/0:61,0:61:99:0,184,2680	0/0:13,0:13:39.13:0,39,584	0/0:25,0:25:75.25:0,75,1124	0/0:24,0:22:69.23:0,69,1022	0/0:9,0:9:27.09:0,27,398
chr10	108058336	.	CTG	C	90.45	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.148;DP=510;FS=0.000;HRun=0;HaplotypeScore=57.6578;InbreedingCoeff=0.8234;MQ=64.30;MQ0=1;MQRankSum=0.270;QD=22.61;ReadPosRankSum=-2.061;VQSLOD=3.0916;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.17:0,60,1056	1/1:0,4:4:12.04:176,12,0	0/0:15,0:11:20.12:0,20,365	0/0:14,0:11:26.27:0,26,500	0/0:13,0:13:24.08:0,24,447	0/0:9,0:9:27.07:0,27,464	0/0:22,0:22:63.20:0,63,1139	0/0:19,0:19:54.16:0,54,942	0/0:22,0:22:66.23:0,66,1234	0/0:13,0:13:33.10:0,33,559	0/0:2,0:2:6:0,6,80	0/0:33,0:33:99:0,99,1805	0/0:5,0:5:15.04:0,15,250	0/0:19,0:19:57.20:0,57,1057	0/0:26,0:26:66.19:0,66,1169	0/0:19,0:19:54.17:0,54,978	0/0:43,0:43:99:0,126,2258	0/0:38,1:38:64.29:0,64,1755	0/0:15,0:14:39.12:0,39,667	0/0:7,0:7:15.02:0,15,218	0/0:27,0:27:78.22:0,78,1355	0/0:9,0:9:15.49:0,15,219	0/0:8,0:8:18.04:0,18,297	0/0:46,0:46:99:0,135,2480	0/0:12,0:12:36.10:0,36,611	0/0:16,0:16:48.13:0,48,832	0/0:21,0:20:63.22:0,63,1177	0/0:9,0:9:27.09:0,27,505
chr10	108058451	.	AAAAG	A	256.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.054;DP=630;FS=16.235;HRun=0;HaplotypeScore=100.3062;InbreedingCoeff=0.9000;MQ=64.47;MQ0=1;MQRankSum=0.590;QD=25.60;ReadPosRankSum=0.709;VQSLOD=2.1910;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,2479	1/1:0,10:10:21.07:348,21,0	0/0:24,0:16:14.74:0,15,380	0/0:11,0:6:6.94:0,7,165	0/0:19,0:19:51.12:0,51,1024	0/0:17,0:17:45.15:0,45,1125	0/0:20,0:20:54.08:0,54,1094	0/0:22,0:22:51.17:0,51,1193	0/0:18,0:18:48.15:0,48,1156	0/0:34,0:34:99:0,102,2213	0/0:16,0:16:39.12:0,39,830	0/0:17,0:17:41.56:0,42,282	0/0:12,0:12:27.08:0,27,610	0/0:18,0:18:45.14:0,45,1036	0/0:22,0:22:60.14:0,60,1122	0/0:18,0:18:54.16:0,54,1182	0/0:38,0:38:99:0,111,2325	0/0:25,0:25:66.65:0,67,1462	0/0:19,0:17:42.09:0,42,795	0/0:24,0:24:66.16:0,66,1288	0/0:23,0:23:66.20:0,66,1526	0/0:20,0:20:51.14:0,51,1113	0/0:20,0:20:60.13:0,60,1222	0/0:21,0:21:60.14:0,60,1349	0/0:30,0:30:81.25:0,81,1767	0/0:32,0:32:84.24:0,84,1840	0/0:30,0:29:78.23:0,78,1745	0/0:28,0:28:78.25:0,78,1847
chr10	108058461	.	AAG	A	487.61	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=7.093;DP=664;FS=16.299;HRun=0;HaplotypeScore=77.3846;InbreedingCoeff=0.6397;MQ=65.47;MQ0=1;MQRankSum=0.848;QD=16.25;ReadPosRankSum=1.941;VQSLOD=2.5184;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,117,1909	0/1:11,0:11:20.51:21,0,26	0/0:23,0:16:18.55:0,19,247	0/0:14,0:9:15:0,15,175	0/0:17,0:17:42.14:0,42,693	0/0:17,0:17:51.13:0,51,764	0/0:23,0:23:54.16:0,54,848	0/0:27,0:27:72.23:0,72,1111	0/0:20,0:20:60.20:0,60,980	0/0:37,0:37:84.23:0,84,1244	0/0:14,0:14:33.10:0,33,520	1/1:1,18:19:45.14:573,45,0	0/0:10,0:10:27.09:0,27,446	0/0:17,0:17:45.14:0,45,716	0/0:22,0:22:45.15:0,45,752	0/0:19,0:19:48.16:0,48,803	0/0:42,0:42:96.33:0,96,1581	0/0:28,0:28:75.20:0,75,1174	0/0:18,0:17:36.12:0,36,584	0/0:22,0:22:48.15:0,48,766	0/0:24,0:24:69.22:0,69,1091	0/0:23,0:23:60.19:0,60,946	0/0:21,0:21:48.12:0,48,721	0/0:25,0:25:69.22:0,69,1109	0/0:32,0:32:75.24:0,75,1186	0/0:36,0:36:93.30:0,93,1470	0/0:28,0:27:69.21:0,69,1103	0/0:29,0:29:87.26:0,87,1390
chr10	108060546	.	AC	A	1705.56	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=7.876;DP=353;FS=7.911;HRun=7;HaplotypeScore=40.6090;InbreedingCoeff=0.8704;MQ=86.08;MQ0=0;MQRankSum=-4.029;QD=17.95;ReadPosRankSum=-0.739;VQSLOD=2.4242;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:44.96:0,45,486	0/0:6,0:6:18.06:0,18,226	0/0:19,0:19:42.12:0,42,505	0/1:12,0:12:3.08:3,0,251	0/0:9,0:9:21.07:0,21,261	0/0:8,0:8:24.06:0,24,288	0/0:21,0:21:54.13:0,54,639	1/1:1,11:12:24.05:245,24,0	0/0:15,0:15:45.14:0,45,566	0/0:7,0:7:20.87:0,21,211	0/0:2,0:2:5.95:0,6,56	0/0:17,0:17:48.14:0,48,592	0/0:12,0:12:27.07:0,27,326	0/0:16,0:16:45.13:0,45,553	0/0:4,0:4:12.04:0,12,151	0/0:10,0:10:27.07:0,27,316	0/0:31,0:31:79.07:0,79,923	0/0:15,0:15:42.13:0,42,528	1/1:1,5:6:15.03:149,15,0	1/1:1,5:6:15.03:150,15,0	1/1:4,38:42:99:1026,102,0	0/0:7,0:7:18.06:0,18,221	0/0:6,0:6:18.06:0,18,226	0/0:16,0:16:14.68:0,15,486	0/0:6,0:6:18.05:0,18,214	0/0:6,0:6:18.06:0,18,226	1/1:5,11:16:30.07:306,30,0	0/0:6,0:6:18.06:0,18,226
chr10	108060602	.	C	CAGT	1901.52	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.856;DP=217;FS=1.644;HRun=0;HaplotypeScore=43.5415;InbreedingCoeff=0.8323;MQ=76.11;MQ0=0;MQRankSum=-5.856;QD=36.57;ReadPosRankSum=-1.116;VQSLOD=3.1509;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:47.98:0,48,639	0/0:7,0:7:15.04:0,15,245	0/0:3,0:3:8.92:0,9,117	0/0:9,0:9:22.64:0,23,288	0/0:3,0:3:6:0,6,51	0/0:4,0:4:12.02:0,12,165	0/0:12,0:12:36.11:0,36,628	1/1:1,12:14:33.03:623,33,0	0/0:9,0:9:27.09:0,27,502	0/0:5,0:5:14.96:0,15,212	0/0:3,0:3:8.98:0,9,98	0/0:12,0:12:36.11:0,36,640	0/0:8,0:8:24.07:0,24,416	0/0:11,0:11:33.11:0,33,606	0/0:5,0:5:15.05:0,15,272	0/0:3,0:3:9.03:0,9,168	0/0:14,0:14:39.13:0,39,702	0/0:5,0:5:15.05:0,15,279	1/1:2,4:6:18.05:329,18,0	1/1:2,2:4:5.37:145,5,0	1/1:8,17:25:42.04:748,42,0	0/0:4,0:4:9.02:0,9,138	0/0:5,0:5:14.95:0,15,148	0/0:11,0:11:30.07:0,30,520	0/0:5,0:5:12:0,12,133	0/0:4,0:4:9.02:0,9,110	1/1:0,3:3:9.03:219,9,0	0/0:4,0:4:12.01:0,12,153
chr10	108062417	.	G	GGT	1573.05	PASS	AB=0.926;AC=12;AF=0.214;AN=56;BaseQRankSum=6.825;DP=547;FS=5.872;HRun=0;HaplotypeScore=114.6416;InbreedingCoeff=0.8239;MQ=69.40;MQ0=3;MQRankSum=-7.054;QD=12.39;ReadPosRankSum=-8.887;VQSLOD=0.7077;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.06:0,87,1368	0/1:6,0:6:1.35:1,0,40	0/0:26,0:21:19.53:0,20,578	0/0:12,0:8:18.14:0,18,219	0/0:23,0:23:66.18:0,66,975	0/0:24,0:24:69.22:0,69,1063	0/0:19,0:19:51.15:0,51,785	1/1:10,11:21:52.67:463,53,0	0/0:15,0:15:39.11:0,39,587	0/0:18,0:18:48.15:0,48,734	0/0:12,0:12:33.10:0,33,495	0/1:19,0:23:37.67:38,0,142	0/0:11,0:11:30.10:0,30,464	0/0:17,0:17:28.40:0,28,652	0/0:23,0:23:69.20:0,69,1046	0/0:18,0:18:42.11:0,42,657	0/0:35,0:35:90.28:0,90,1430	0/0:21,0:21:54.04:0,54,794	1/1:23,0:22:54.43:442,54,0	1/1:16,0:16:26.34:204,26,0	1/1:12,0:12:24.31:230,24,0	0/0:15,0:15:39.09:0,39,562	0/0:13,0:13:39.06:0,39,554	0/0:28,0:28:72.24:0,72,1146	0/0:19,0:19:51.12:0,51,762	0/0:26,0:26:72.70:0,73,1125	1/1:24,0:24:38.09:372,38,0	0/0:12,0:11:21:0,21,292
chr10	108065160	.	T	TTGC	1029.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.723;DP=595;FS=0.000;HRun=0;HaplotypeScore=85.9837;InbreedingCoeff=0.5847;MQ=74.05;MQ0=0;MQRankSum=0.025;QD=41.18;ReadPosRankSum=-0.228;VQSLOD=4.4603;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:69.23:0,69,969	0/0:7,0:7:13.30:0,13,208	0/0:12,0:11:2.16:0,2,40	0/0:16,0:16:12.04:0,12,169	0/0:20,0:20:15.03:0,15,178	0/0:21,0:21:48.16:0,48,670	0/0:27,0:27:60.20:0,60,843	0/0:18,0:18:20.75:0,21,294	1/1:6,18:25:57.13:1124,57,0	0/0:10,0:10:9.03:0,9,125	0/0:11,0:11:12.04:0,12,168	0/0:31,0:32:78.19:0,78,1024	0/0:20,0:20:48.14:0,48,654	0/0:20,0:20:42.14:0,42,590	0/0:20,0:20:42.14:0,42,588	0/0:18,0:18:51.17:0,51,716	0/0:39,0:39:87.25:0,87,1197	0/0:25,0:25:60.20:0,60,843	0/0:22,0:22:30.09:0,30,406	0/0:9,0:9:12.04:0,12,169	0/0:49,0:49:75.21:0,75,1018	0/0:8,0:8:6.02:0,6,84	0/0:13,0:13:3:0,3,25	0/0:40,0:40:90.21:0,90,1220	0/0:19,0:19:33.10:0,33,448	0/0:20,0:20:26.77:0,27,378	0/0:17,0:17:36.09:0,36,472	0/0:19,0:19:42.14:0,42,590
chr10	108067293	.	G	GTGTGTA	838.25	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=1.944;DP=824;FS=2.046;HRun=0;HaplotypeScore=193.1303;InbreedingCoeff=0.6284;MQ=60.99;MQ0=13;MQRankSum=-3.433;QD=15.52;ReadPosRankSum=1.918;VQSLOD=3.2046;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:85.18:0,85,947	1/1:3,15:19:16.57:538,17,0	0/0:34,0:14:27.90:0,28,275	0/0:46,0:28:60.64:0,61,553	0/0:9,0:9:14.84:0,15,122	0/0:15,0:15:39.04:0,39,556	0/0:42,0:42:99:0,107,1380	0/0:13,0:13:32.90:0,33,322	0/0:32,0:31:80.93:0,81,998	0/0:31,0:31:70.25:0,70,994	0/0:10,0:9:24.01:0,24,329	0/1:34,0:33:99:403,0,154	0/0:28,0:28:59.60:0,60,836	0/0:31,0:31:65.56:0,66,847	0/0:26,0:26:65.90:0,66,839	0/0:27,0:27:72.10:0,72,1149	0/0:41,0:41:99:0,104,1398	0/0:40,0:40:60.70:0,61,1349	0/0:18,0:17:44.51:0,45,363	0/0:18,0:18:32.27:0,32,349	0/0:91,0:91:99:0,185,1916	0/0:16,0:16:41.84:0,42,508	0/0:17,0:17:35.30:0,35,285	0/0:56,0:55:99:0,152,2293	0/0:15,0:15:38.99:0,39,434	0/0:27,0:27:71.99:0,72,769	0/0:28,0:28:64.54:0,65,757	0/0:14,0:14:38.99:0,39,557
chr10	108067322	.	T	TGTGTGTGC	1019.51	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=3.811;DP=743;FS=1.664;HRun=0;HaplotypeScore=187.0481;InbreedingCoeff=0.6354;MQ=65.34;MQ0=14;MQRankSum=-3.152;QD=21.69;ReadPosRankSum=-0.845;VQSLOD=3.3332;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:78.48:0,78,965	0/1:14,0:13:44.04:171,0,44	0/0:47,0:18:40.69:0,41,361	0/0:42,0:24:55.73:0,56,524	0/0:10,0:10:26.92:0,27,213	0/0:18,0:18:54.02:0,54,701	0/0:34,0:34:93.01:0,93,1419	0/0:21,0:21:49.72:0,50,517	0/0:24,0:23:59.24:0,59,940	0/0:29,0:29:85.81:0,86,1230	0/0:6,0:5:15.02:0,15,278	1/1:27,5:32:59.57:955,60,0	0/0:26,0:26:59.67:0,60,973	0/0:25,0:25:62.52:0,63,1008	0/0:28,0:28:78.28:0,78,1086	0/0:23,0:23:60.53:0,61,1273	0/0:40,0:40:84.28:0,84,1637	0/0:31,0:31:81.67:0,82,1501	0/0:17,0:16:44.24:0,44,397	0/0:13,0:13:24.03:0,24,383	0/0:69,0:69:99:0,128,1764	0/0:18,0:18:47.25:0,47,566	0/0:15,0:15:41.96:0,42,396	0/0:48,0:47:99:0,132,2571	0/0:19,0:19:50.98:0,51,600	0/0:22,0:22:66.01:0,66,787	0/0:24,0:23:59.41:0,59,956	0/0:7,0:7:18.06:0,18,521
chr10	108067370	.	GCA	G	1137.15	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.271;DP=740;FS=1.513;HRun=0;HaplotypeScore=93.5609;InbreedingCoeff=0.9019;MQ=79.73;MQ0=0;MQRankSum=-1.451;QD=35.54;ReadPosRankSum=2.936;VQSLOD=6.0451;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,111,2194	0/0:14,0:14:39.13:0,39,723	0/0:18,0:18:50.59:0,51,822	0/0:18,0:18:48.16:0,48,833	0/0:15,0:15:42.14:0,42,786	0/0:16,0:16:48.16:0,48,899	0/0:39,0:39:99:0,114,2014	0/0:22,0:22:66.22:0,66,1208	0/0:32,0:32:90.29:0,90,1640	0/0:30,0:30:87.29:0,87,1590	0/0:8,0:8:24.08:0,24,449	1/1:2,30:32:84.28:1232,84,0	0/0:23,0:23:66.20:0,66,1185	0/0:36,0:36:99:0,108,2022	0/0:43,0:43:99:0,129,2308	0/0:33,0:33:99:0,99,1837	0/0:39,0:39:99:0,108,1907	0/0:24,0:24:72.20:0,72,1281	0/0:19,0:19:54.19:0,54,1004	0/0:8,0:8:24.07:0,24,419	0/0:62,0:62:99:0,166,3020	0/0:18,0:18:48.16:0,48,897	0/0:17,0:17:48.16:0,48,894	0/0:44,0:44:99:0,123,2242	0/0:25,0:25:72.25:0,72,1346	0/0:30,0:30:90.31:0,90,1680	0/0:26,0:26:69.24:0,69,1281	0/0:2,0:2:6.02:0,6,112
chr10	108068070	.	C	CT	1214.04	PASS	AB=0.900;AC=16;AF=0.286;AN=56;BaseQRankSum=-3.831;DP=330;FS=6.751;HRun=11;HaplotypeScore=39.1983;InbreedingCoeff=0.6146;MQ=81.82;MQ0=2;MQRankSum=-0.646;QD=10.03;ReadPosRankSum=-1.664;VQSLOD=1.3868;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:44.81:0,45,348	1/1:2,3:5:9.02:91,9,0	0/1:20,0:13:15.44:19,0,15	0/0:16,0:11:8.93:0,9,43	0/0:11,0:12:28.93:0,29,215	0/0:11,0:11:23.90:0,24,186	0/0:14,0:14:29.80:0,30,226	1/1:9,14:23:16.06:342,16,0	0/0:10,0:10:26.89:0,27,209	0/1:8,0:8:2.54:3,0,139	0/1:10,0:11:6.36:6,0,102	0/1:3,5:9:5.36:118,0,5	0/0:7,0:8:19.95:0,20,143	0/0:11,0:11:20.91:0,21,162	0/0:11,0:11:26.89:0,27,209	0/0:5,0:5:11.94:0,12,93	0/0:18,0:19:49.83:0,50,377	0/0:20,0:20:50.79:0,51,392	1/1:5,8:16:32.74:302,33,0	1/1:3,4:7:14.98:137,15,0	1/1:4,9:13:0.81:190,1,0	0/0:4,0:4:11.95:0,12,93	0/0:3,0:3:5.97:0,6,46	0/0:8,0:8:20.80:0,21,149	0/0:7,0:6:14.92:0,15,114	0/0:15,0:15:29.88:0,30,232	1/1:2,7:9:18.04:183,18,0	0/0:14,0:14:29.86:0,30,232
chr10	108069423	.	AGAGATCAG	A	175.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.193;DP=481;FS=0.000;HRun=0;HaplotypeScore=119.5197;InbreedingCoeff=0.7829;MQ=87.30;MQ0=0;MQRankSum=-1.740;QD=43.76;ReadPosRankSum=1.316;VQSLOD=3.2847;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.18:0,57,2373	1/1:0,4:4:9.03:258,9,0	0/0:15,0:15:45.14:0,45,1674	0/0:21,0:21:47.03:0,47,1460	0/0:11,0:11:33.11:0,33,1476	0/0:17,0:17:48.16:0,48,2058	0/0:31,0:31:93.30:0,93,3916	0/0:12,0:12:36.12:0,36,1611	0/0:15,0:15:45.15:0,45,1894	0/0:5,0:5:15.05:0,15,629	0/0:3,0:3:6.02:0,6,268	0/0:20,0:20:60.21:0,60,2617	0/0:16,0:16:48.16:0,48,2083	0/0:30,0:30:81.28:0,81,3396	0/0:17,0:17:51.18:0,51,2193	0/0:19,0:19:57.20:0,57,2498	0/0:24,0:24:69.24:0,69,3085	0/0:20,0:20:60.21:0,60,2437	0/0:18,0:18:51.13:0,51,2070	0/0:9,0:9:27.09:0,27,1191	0/0:43,0:43:99:0,123,5451	0/0:9,0:9:21.07:0,21,874	0/0:9,0:9:24.08:0,24,1042	0/0:29,0:29:87.30:0,87,3628	0/0:10,0:10:30.10:0,30,1333	0/0:26,0:26:75.26:0,75,3098	0/0:24,0:24:66.23:0,66,2937	0/0:3,0:3:9.03:0,9,402
chr10	108070798	.	C	CT	1078.12	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.919;DP=634;FS=7.089;HRun=3;HaplotypeScore=61.1024;InbreedingCoeff=0.8939;MQ=77.92;MQ0=0;MQRankSum=0.054;QD=34.78;ReadPosRankSum=0.742;VQSLOD=4.1031;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1246	0/0:6,0:6:18.06:0,18,216	0/0:16,0:15:42.10:0,42,489	0/0:24,0:23:6.11:0,6,369	0/0:11,0:11:30.05:0,30,324	0/0:21,0:21:63.18:0,63,746	0/0:31,0:31:87.22:0,87,1007	0/0:28,0:28:69.20:0,69,819	0/0:17,0:17:45.06:0,45,499	0/0:28,0:28:84.23:0,84,979	0/0:17,0:17:51.13:0,51,598	1/1:1,29:31:84.28:1173,84,0	0/0:25,0:25:66.20:0,66,791	0/0:24,0:24:69.19:0,69,815	0/0:22,0:22:63.18:0,63,744	0/0:24,0:24:63.18:0,63,744	0/0:31,0:31:90.24:0,90,1055	0/0:41,0:41:99:0,105,1244	0/0:12,0:12:30.06:0,30,346	0/0:11,0:11:30.07:0,30,347	0/0:49,0:49:99:0,135,1578	0/0:19,0:19:57.17:0,57,682	0/0:8,0:8:24.06:0,24,278	0/0:40,0:40:99:0,108,1295	0/0:14,0:14:42.13:0,42,504	0/0:20,0:20:57.16:0,57,665	0/0:20,0:20:60.18:0,60,719	0/0:7,0:7:21.06:0,21,252
chr10	108071046	.	CCA	C	5154.56	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.112;DP=642;FS=1.231;HRun=0;HaplotypeScore=97.9893;InbreedingCoeff=0.9981;MQ=81.97;MQ0=0;MQRankSum=-5.421;QD=39.65;ReadPosRankSum=-1.646;VQSLOD=6.2592;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,2703	0/0:11,0:11:27.09:0,27,548	0/0:18,0:19:28.12:0,28,815	0/0:18,0:18:47.98:0,48,819	0/0:20,0:20:60.17:0,60,1144	0/0:20,0:20:60.19:0,60,1182	0/0:19,0:19:57.18:0,57,1106	1/1:0,31:31:89.83:1291,90,0	0/0:29,0:29:87.26:0,87,1659	0/0:30,0:30:87.29:0,87,1686	0/0:18,0:18:54.19:0,54,1084	0/0:23,0:23:69.22:0,69,1365	0/0:34,0:34:99:0,102,2055	0/0:16,0:16:48.16:0,48,960	0/0:32,0:32:93.32:0,93,1889	0/0:22,0:22:66.23:0,66,1338	0/0:30,0:30:90.30:0,90,1792	0/0:26,0:25:78.27:0,78,1581	1/1:0,21:21:63.22:1022,63,0	1/1:0,13:13:24.08:391,24,0	1/1:0,52:52:99:1921,120,0	0/0:25,0:25:72.25:0,72,1451	0/0:18,0:18:54.19:0,54,1094	0/0:15,0:15:42.14:0,42,852	0/0:14,0:14:42.14:0,42,816	0/0:21,0:21:60.13:0,60,1102	1/1:0,13:13:33.11:529,33,0	0/0:7,0:7:21.07:0,21,426
chr10	108071328	.	C	CT	1631.86	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.641;DP=819;FS=7.527;HRun=1;HaplotypeScore=75.5696;InbreedingCoeff=1.0000;MQ=87.41;MQ0=0;MQRankSum=-1.515;QD=44.10;ReadPosRankSum=2.265;VQSLOD=3.3982;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,1929	0/0:16,0:16:48.14:0,48,638	0/0:26,0:26:75.21:0,75,1021	0/0:31,0:31:93.24:0,93,1240	0/0:17,0:17:51.17:0,51,713	0/0:29,0:29:87.29:0,87,1214	0/0:30,0:30:84.22:0,84,1118	0/0:32,0:32:93.31:0,93,1301	0/0:25,0:25:75.25:0,75,1048	0/0:27,0:27:81.27:0,81,1126	0/0:17,0:17:51.17:0,51,713	1/1:0,37:37:99:1727,108,0	0/0:35,0:35:99:0,105,1468	0/0:37,0:37:99:0,111,1550	0/0:29,0:29:87.28:0,87,1198	0/0:23,0:23:66.22:0,66,923	0/0:41,0:41:99:0,114,1594	0/0:31,0:31:81.25:0,81,1109	0/0:24,0:24:72.23:0,72,986	0/0:27,0:27:81.24:0,81,1099	0/0:49,0:49:99:0,144,2008	0/0:22,0:22:66.22:0,66,921	0/0:24,0:24:72.24:0,72,1007	0/0:49,0:49:99:0,141,1935	0/0:18,0:18:51.17:0,51,713	0/0:34,0:34:99:0,99,1378	0/0:25,0:25:75.25:0,75,1047	0/0:18,0:18:54.18:0,54,755
chr10	108071647	.	A	AG	7555.18	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.300;DP=721;FS=10.126;HRun=2;HaplotypeScore=87.3040;InbreedingCoeff=0.9999;MQ=81.07;MQ0=0;MQRankSum=-5.932;QD=38.74;ReadPosRankSum=-2.092;VQSLOD=3.7806;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1264	1/1:0,14:14:39.13:561,39,0	0/0:14,0:14:39.12:0,39,473	0/0:22,0:22:53.25:0,53,589	0/0:24,0:24:66.21:0,66,818	0/0:16,0:16:45.14:0,45,558	0/0:29,0:29:81.25:0,81,1004	1/1:2,18:20:57.13:753,57,0	0/0:31,0:31:93.29:0,93,1153	0/0:28,0:28:84.26:0,84,1032	0/0:13,0:13:36.11:0,36,446	1/1:2,33:35:93.31:1339,93,0	0/0:18,0:18:54.14:0,54,651	0/0:33,0:33:93.28:0,93,1139	0/0:28,0:28:78.24:0,78,967	0/0:24,0:24:72.21:0,72,878	0/0:37,0:37:99:0,111,1364	0/0:31,0:31:93.29:0,93,1153	1/1:1,22:23:66.19:928,66,0	1/1:0,22:22:63.21:907,63,0	1/1:4,59:63:99:2376,166,0	0/0:27,0:27:81.25:0,81,1004	0/0:15,0:15:45.14:0,45,558	0/0:23,0:23:69.22:0,69,855	0/0:26,0:26:75.18:0,75,900	0/0:27,0:27:81.25:0,81,989	1/1:1,17:18:48.16:690,48,0	0/0:26,0:26:75.21:0,75,915
chr10	108071873	.	AC	A	1429.87	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.501;DP=812;FS=1.258;HRun=3;HaplotypeScore=79.8603;InbreedingCoeff=0.9898;MQ=84.86;MQ0=0;MQRankSum=-1.192;QD=27.50;ReadPosRankSum=0.752;VQSLOD=2.7681;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1488	0/0:17,0:17:48.12:0,48,664	0/0:21,0:21:63.15:0,63,834	0/0:29,0:29:66.19:0,66,884	0/0:15,0:15:45.13:0,45,625	0/0:17,0:17:51.17:0,51,734	0/0:50,0:50:99:0,144,2074	0/0:24,0:24:69.22:0,69,962	0/0:33,0:33:99:0,99,1404	0/0:29,0:29:81.26:0,81,1150	0/0:12,0:12:33.10:0,33,458	1/1:4,48:52:99:1525,123,0	0/0:29,0:29:87.27:0,87,1230	0/0:32,0:32:96.32:0,96,1382	0/0:40,0:40:99:0,117,1684	0/0:26,0:26:72.24:0,72,1028	0/0:50,0:50:99:0,138,1963	0/0:35,0:35:99:0,102,1409	0/0:28,0:28:84.28:0,84,1209	0/0:8,0:8:18.06:0,18,259	0/0:67,0:67:99:0,193,2742	0/0:17,0:17:45.14:0,45,628	0/0:23,0:23:63.20:0,63,869	0/0:39,0:39:99:0,108,1535	0/0:21,0:21:63.19:0,63,886	0/0:31,0:31:90.29:0,90,1272	0/0:22,0:22:66.19:0,66,927	0/0:9,0:9:24.08:0,24,344
chr10	108073253	.	T	TG	5797.53	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-7.962;DP=615;FS=1.588;HRun=3;HaplotypeScore=60.6559;InbreedingCoeff=0.9980;MQ=78.77;MQ0=0;MQRankSum=-3.249;QD=37.16;ReadPosRankSum=-1.058;VQSLOD=4.8826;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,1763	1/1:0,11:11:33.09:443,33,0	0/0:13,0:13:27.05:0,27,292	0/0:18,0:18:41.68:0,42,409	0/0:19,0:19:54.15:0,54,635	0/0:16,0:16:48.15:0,48,576	0/0:27,0:27:81.23:0,81,958	1/1:3,23:26:69.22:949,69,0	0/0:18,0:18:54.17:0,54,648	0/0:24,0:24:72.21:0,72,846	0/0:17,0:17:45.14:0,45,540	1/1:1,15:16:42.14:585,42,0	0/0:20,0:20:60.18:0,60,720	0/0:20,0:20:54.16:0,54,647	0/0:21,0:21:57.17:0,57,683	0/0:24,0:24:63.17:0,63,733	0/0:31,0:31:87.27:0,87,1043	0/0:27,0:27:75.23:0,75,900	1/1:2,24:26:69.18:925,69,0	1/1:0,10:10:27.09:377,27,0	1/1:3,36:39:99:1512,108,0	0/0:18,0:18:54.17:0,54,648	0/0:10,0:10:30.08:0,30,347	0/0:37,0:37:99:0,108,1266	0/0:17,0:17:51.16:0,51,612	0/0:25,0:25:69.21:0,69,828	1/1:1,27:28:72.13:1006,72,0	0/0:7,0:7:18.06:0,18,216
chr10	108073441	.	GTTTTTTGTTTGT	G	5052.59	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.925;DP=594;FS=50.366;HRun=0;HaplotypeScore=191.4165;InbreedingCoeff=0.9567;MQ=70.49;MQ0=3;MQRankSum=-6.334;QD=51.56;ReadPosRankSum=-1.614;VQSLOD=2.1204;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.76:0,88,4740	1/1:1,0:2:6.02:145,6,0	0/0:40,0:24:33.98:0,34,1265	0/0:38,0:21:5.84:0,6,833	0/0:22,0:22:63.22:0,63,3518	0/0:22,0:22:63.21:0,63,3242	0/0:23,0:23:66.20:0,66,3333	1/1:4,16:20:47.72:786,48,0	0/0:25,0:25:69.22:0,69,3408	0/0:28,0:28:78.27:0,78,3741	0/0:16,0:16:45.11:0,45,2428	1/1:0,17:17:24.08:878,24,0	0/0:19,0:19:54.19:0,54,2717	0/0:21,0:21:63.18:0,63,3229	0/0:21,0:21:63.22:0,63,3455	0/0:18,0:18:54.16:0,54,2457	0/0:31,0:30:87.28:0,87,4482	0/0:21,0:21:60.14:0,60,2563	1/1:4,15:19:42.10:1047,42,0	1/1:0,9:9:21.07:622,21,0	1/1:3,10:13:15.05:476,15,0	0/0:17,0:17:48.16:0,48,2445	0/0:24,0:24:72.25:0,72,4195	0/0:30,0:29:84.29:0,84,4527	0/0:18,0:18:54.19:0,54,2868	0/0:21,0:21:60.21:0,60,3128	1/1:1,17:18:36.12:1099,36,0	0/0:8,0:8:24.08:0,24,1361
chr10	108073588	.	G	GT	703.87	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=5.775;DP=444;FS=14.008;HRun=0;HaplotypeScore=57.7479;InbreedingCoeff=0.9195;MQ=80.32;MQ0=0;MQRankSum=-7.450;QD=19.02;ReadPosRankSum=0.056;VQSLOD=4.6999;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,147,1891	1/1:0,6:6:9.02:90,9,0	0/0:19,0:18:49.94:0,50,616	0/0:19,0:19:48.77:0,49,527	0/0:10,0:10:30.09:0,30,401	0/0:19,0:19:56.95:0,57,687	0/0:23,0:23:69.09:0,69,806	1/1:0,10:10:24.02:306,24,0	0/0:24,0:23:69.19:0,69,911	0/0:13,0:13:39.12:0,39,518	0/0:14,0:14:42.12:0,42,552	1/1:1,5:6:11.91:105,12,0	0/0:17,0:17:51.15:0,51,677	0/0:22,0:22:60.19:0,60,821	0/0:23,0:23:69.18:0,69,897	0/0:13,0:13:39.12:0,39,529	0/0:32,0:31:93.17:0,93,1132	0/0:30,0:30:90.21:0,90,1183	1/1:0,3:3:9.02:113,9,0	1/1:1,4:4:12.03:131,12,0	./.	0/0:12,0:12:33.11:0,33,460	0/0:8,0:8:21.07:0,21,292	0/0:29,0:29:84.21:0,84,1102	0/0:11,0:11:33.09:0,33,430	0/0:16,0:16:48.12:0,48,583	1/1:0,7:7:12.02:131,12,0	0/0:1,0:1:3.01:0,3,42
chr10	108073591	.	G	GAGGA	696.56	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=8.684;DP=433;FS=6.310;HRun=0;HaplotypeScore=87.8803;InbreedingCoeff=0.8373;MQ=82.56;MQ0=0;MQRankSum=-6.020;QD=13.66;ReadPosRankSum=-1.579;VQSLOD=1.9429;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,2672	1/1:1,4:5:8.99:90,9,0	0/0:20,0:19:41.32:0,41,824	0/1:20,0:20:4.42:4,0,639	0/0:10,0:10:30.09:0,30,569	0/0:17,0:17:42.14:0,42,868	0/0:20,0:21:60.17:0,60,1094	1/1:6,0:6:18.02:283,18,0	0/0:24,0:23:69.24:0,69,1392	0/0:14,0:14:39.13:0,39,772	0/0:14,0:14:36.11:0,36,701	1/1:4,2:6:13.53:196,14,0	0/0:17,0:17:51.17:0,51,1032	0/0:21,0:21:57.02:0,57,1101	0/0:23,0:23:63.20:0,63,1244	0/0:14,0:14:42.13:0,42,820	0/0:32,0:31:84.26:0,84,1619	0/0:31,0:31:84.17:0,84,1553	1/1:2,0:2:6.02:104,6,0	1/1:0,4:4:11.90:84,12,0	./.	0/0:11,0:11:33.10:0,33,652	0/0:8,0:8:21.06:0,21,388	0/0:30,0:30:90.25:0,90,1693	0/0:11,0:11:33.11:0,33,667	0/0:13,0:13:33.10:0,33,645	1/1:1,6:7:11.88:107,12,0	0/0:1,0:1:3.01:0,3,63
chr10	108073595	.	AG	A	198.66	PASS	AC=8;AF=0.160;AN=50;BaseQRankSum=6.113;DP=420;FS=10.675;HRun=2;HaplotypeScore=58.5614;InbreedingCoeff=0.8878;MQ=88.31;MQ0=0;MQRankSum=-6.078;QD=11.04;ReadPosRankSum=0.616;VQSLOD=0.6057;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,159,2441	1/1:0,4:4:9.01:85,9,0	0/0:28,0:27:66.55:0,67,909	0/0:16,0:16:35.71:0,36,544	0/0:9,0:9:27.09:0,27,432	0/0:17,0:17:45.15:0,45,712	0/0:19,0:19:57.09:0,57,879	./.	0/0:24,0:23:69.24:0,69,1103	0/0:15,0:15:45.15:0,45,718	0/0:12,0:12:33.11:0,33,528	1/1:1,2:3:8.88:64,9,0	0/0:18,0:18:54.18:0,54,859	0/0:20,0:20:54.18:0,54,855	0/0:22,0:22:66.22:0,66,1043	0/0:15,0:15:45.15:0,45,717	0/0:30,0:29:87.30:0,87,1386	0/0:28,0:28:81.28:0,81,1278	./.	1/1:0,4:3:9.01:86,9,0	./.	0/0:10,0:10:30.10:0,30,474	0/0:7,0:7:18.05:0,18,265	0/0:33,0:33:99:0,99,1518	0/0:13,0:13:39.12:0,39,594	0/0:11,0:11:33.11:0,33,527	1/1:1,6:7:11.97:103,12,0	0/0:1,0:1:3.01:0,3,48
chr10	108073702	.	TGGAG	T	277.61	PASS	AB=0.862;AC=8;AF=0.148;AN=54;BaseQRankSum=7.761;DP=380;FS=3.607;HRun=0;HaplotypeScore=90.8270;InbreedingCoeff=0.4794;MQ=63.28;MQ0=6;MQRankSum=-4.388;QD=5.24;ReadPosRankSum=-4.254;VQSLOD=0.4983;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,2934	0/0:2,0:2:2.04:0,2,6	0/1:16,5:14:99:151,0,304	0/0:29,0:21:0.59:0,1,723	0/0:7,0:7:21.07:0,21,448	0/0:13,0:12:33.07:0,33,732	0/0:26,0:26:69.20:0,69,1708	0/1:20,0:22:99:135,0,212	0/0:13,0:13:39.13:0,39,1056	0/0:17,0:16:45.15:0,45,1188	0/0:10,0:10:30.10:0,30,783	0/0:1,0:1:2.84:0,3,14	0/0:11,0:11:33.10:0,33,821	0/0:16,0:16:48.16:0,48,1235	0/0:9,0:9:26.97:0,27,549	0/0:10,0:10:24.08:0,24,610	0/0:24,0:24:60.19:0,60,1442	0/0:15,0:15:45.13:0,45,1171	0/0:4,0:4:7.82:0,8,34	1/1:2,0:3:6.93:27,7,0	1/1:5,0:5:5.16:20,5,0	0/0:11,0:11:33.09:0,33,774	0/0:12,0:12:30.09:0,30,757	0/0:36,0:36:80.34:0,80,2521	0/0:7,0:7:21.07:0,21,534	0/0:14,0:14:42.14:0,42,1148	1/1:0,0:2:6.02:74,6,0	./.
chr10	108074945	.	CTT	C	227.12	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.586;DP=579;FS=3.465;HRun=3;HaplotypeScore=90.6781;InbreedingCoeff=0.9626;MQ=84.07;MQ0=0;MQRankSum=-3.082;QD=28.39;ReadPosRankSum=-0.684;VQSLOD=2.6551;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1905	1/1:0,8:8:21.07:319,21,0	0/0:18,0:18:45.05:0,45,743	0/0:20,0:20:54.09:0,54,848	0/0:11,0:11:33.11:0,33,631	0/0:15,0:15:42.11:0,42,715	0/0:31,0:31:90.29:0,90,1669	0/0:17,0:17:48.14:0,48,861	0/0:23,0:23:66.23:0,66,1274	0/0:18,0:18:51.15:0,51,895	0/0:10,0:10:30.10:0,30,574	0/0:22,0:22:66.16:0,66,1167	0/0:17,0:17:51.17:0,51,953	0/0:24,0:24:72.20:0,72,1279	0/0:17,0:17:51.14:0,51,861	0/0:18,0:18:51.17:0,51,985	0/0:27,0:27:81.28:0,81,1564	0/0:21,0:21:60.21:0,60,1159	0/0:27,0:27:75.21:0,75,1315	0/0:6,0:6:12.04:0,12,232	0/0:57,0:57:99:0,172,3212	0/0:15,0:15:45.15:0,45,832	0/0:9,0:9:27.08:0,27,491	0/0:41,0:41:99:0,123,2312	0/0:20,0:20:59.85:0,60,1040	0/0:25,0:25:75.23:0,75,1357	0/0:20,0:20:60.18:0,60,1078	0/0:8,0:8:24.07:0,24,430
chr10	108076297	.	AG	A	2109.65	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.699;DP=450;FS=2.203;HRun=6;HaplotypeScore=57.3692;InbreedingCoeff=0.9842;MQ=71.91;MQ0=0;MQRankSum=-3.773;QD=22.93;ReadPosRankSum=-0.245;VQSLOD=2.7043;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:36.07:0,36,454	1/1:1,4:5:12.03:129,12,0	0/0:11,0:11:27.08:0,27,337	0/0:12,0:12:34.13:0,34,379	0/0:14,0:14:42.14:0,42,550	0/0:9,0:9:21.06:0,21,262	0/0:39,0:39:99:0,108,1385	1/1:2,14:16:42.11:451,42,0	0/0:18,0:18:51.15:0,51,655	0/0:10,0:10:21.06:0,21,266	0/0:5,0:5:15.05:0,15,197	0/0:27,0:27:78.20:0,78,991	0/0:22,0:22:63.19:0,63,813	0/0:14,0:14:39.13:0,39,512	0/0:21,0:21:51.17:0,51,671	0/0:24,0:24:66.20:0,66,855	0/0:21,0:21:57.16:0,57,731	0/0:20,0:19:57.18:0,57,738	1/1:7,9:16:33.07:346,33,0	1/1:0,7:7:18.04:191,18,0	1/1:5,26:31:60.08:630,60,0	0/0:10,0:10:24.07:0,24,303	0/0:9,0:9:24.08:0,24,316	0/0:20,0:20:60.15:0,60,770	0/0:10,0:10:27.09:0,27,354	0/0:18,0:18:48.15:0,48,614	1/1:0,17:17:51.13:548,51,0	0/0:7,0:7:18.06:0,18,237
chr10	108076359	.	CCCCCCCG	C	3188.71	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.886;DP=336;FS=28.373;HRun=0;HaplotypeScore=87.1316;InbreedingCoeff=0.8807;MQ=76.02;MQ0=0;MQRankSum=-6.499;QD=46.21;ReadPosRankSum=5.097;VQSLOD=1.2705;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:17.95:0,18,354	1/1:1,4:5:9:169,9,0	0/0:18,0:17:50.13:0,50,983	0/0:19,0:12:25.91:0,26,480	0/0:9,0:9:21.05:0,21,410	0/0:8,0:8:20.37:0,20,262	0/0:29,0:29:79.19:0,79,1803	1/1:0,18:18:51.06:946,51,0	0/0:13,0:13:39.07:0,39,835	0/0:10,0:10:19.76:0,20,322	0/0:3,0:3:6:0,6,94	0/0:21,0:21:55.96:0,56,1156	0/0:15,0:15:42.10:0,42,866	0/0:10,0:10:26.51:0,27,613	0/0:16,0:16:28.97:0,29,400	0/0:14,0:14:39.12:0,39,906	0/0:15,0:15:38.59:0,39,1031	0/0:16,0:15:48.08:0,48,1090	1/1:1,14:15:42.11:820,42,0	1/1:2,1:3:6.02:145,6,0	1/1:4,11:15:25.24:473,25,0	0/0:7,0:7:14.31:0,14,246	0/0:4,0:4:3.48:0,3,70	0/0:17,0:17:39.93:0,40,809	0/0:6,0:6:15.05:0,15,426	0/0:7,0:7:17.29:0,17,295	1/1:1,12:13:33.09:813,33,0	0/0:3,0:3:6.02:0,6,157
chr10	108076570	.	G	GCC	4310.84	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.648;DP=509;FS=13.513;HRun=3;HaplotypeScore=71.1482;InbreedingCoeff=0.9704;MQ=82.33;MQ0=0;MQRankSum=-2.154;QD=40.29;ReadPosRankSum=0.306;VQSLOD=3.3734;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1348	1/1:0,4:4:9.03:165,9,0	0/0:14,0:14:39.13:0,39,535	0/0:17,0:17:51:0,51,649	0/0:8,0:8:15.05:0,15,209	0/0:14,0:14:39.13:0,39,546	0/0:43,0:43:99:0,117,1582	1/1:1,18:19:54.14:912,54,0	0/0:25,0:25:72.24:0,72,1003	0/0:9,0:9:15.04:0,15,197	0/0:6,0:6:15.05:0,15,209	0/0:25,0:25:69.23:0,69,965	0/0:14,0:14:42.12:0,42,569	0/0:19,0:19:51.17:0,51,714	0/0:17,0:17:51.16:0,51,696	0/0:19,0:19:57.19:0,57,797	0/0:27,0:27:81.27:0,81,1133	0/0:22,0:22:66.22:0,66,917	1/1:1,16:17:48.12:790,48,0	1/1:1,5:6:12.04:220,12,0	1/1:6,44:53:99:1869,103,0	0/0:14,0:14:39.09:0,39,495	0/0:7,0:7:21.07:0,21,293	0/0:23,0:23:60.18:0,60,821	0/0:15,0:15:42.06:0,42,588	0/0:18,0:18:42.14:0,42,588	1/1:1,6:8:21.07:355,21,0	0/0:12,0:12:33.09:0,33,441
chr10	108076743	.	A	ACTCCAGACT	9811.04	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=1.206;DP=660;FS=0.000;HRun=0;HaplotypeScore=190.2597;InbreedingCoeff=0.9864;MQ=83.94;MQ0=0;MQRankSum=-12.967;QD=83.86;ReadPosRankSum=-3.921;VQSLOD=4.1470;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,3479	1/1:6,5:11:30.10:1408,30,0	0/0:22,0:22:63.19:0,63,1670	0/0:22,0:22:63.13:0,63,1575	0/0:23,0:23:66.19:0,66,1877	0/0:26,0:26:75.26:0,75,2263	0/0:35,0:35:99:0,102,2824	1/1:14,9:23:66.23:2893,66,0	0/0:24,0:24:69.24:0,69,2070	0/0:15,0:15:36.12:0,36,1117	0/0:17,0:17:42.14:0,42,1222	0/0:40,0:40:99:0,111,3279	0/0:21,0:21:57.17:0,57,1563	0/0:33,0:33:99:0,99,2884	0/0:24,0:24:69.24:0,69,2097	0/0:23,0:23:66.21:0,66,1937	0/0:30,0:30:84.23:0,84,2367	0/0:25,0:25:75.19:0,75,2136	1/1:9,5:18:51.17:1892,51,0	1/1:6,6:12:18.06:726,18,0	1/1:13,19:37:31.63:1110,32,0	0/0:20,0:20:57.20:0,57,1746	0/0:20,0:20:54.19:0,54,1631	0/0:31,0:31:90.29:0,90,2695	0/0:15,0:15:42.14:0,42,1303	0/0:30,0:30:84.28:0,84,2382	1/1:5,11:16:39.13:1783,39,0	0/0:3,0:3:9.03:0,9,279
chr10	108077242	.	GGTGTGCAC	G	2147.35	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.925;DP=712;FS=0.000;HRun=0;HaplotypeScore=176.5526;InbreedingCoeff=0.9948;MQ=63.87;MQ0=5;MQRankSum=-7.806;QD=74.05;ReadPosRankSum=1.172;VQSLOD=3.1888;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,5666	0/0:9,0:9:27.09:0,27,1148	0/0:35,0:26:62.49:0,62,2647	0/0:39,0:29:81.21:0,81,2996	0/0:17,0:17:51.16:0,51,1990	0/0:26,0:26:75.26:0,75,3292	0/0:40,0:40:99:0,120,5218	0/0:29,0:29:84.28:0,84,3465	0/0:31,0:31:93.32:0,93,4187	0/0:29,0:29:81.28:0,81,3707	0/0:12,0:12:36.12:0,36,1543	1/1:0,29:29:75.26:2242,75,0	0/0:18,0:18:54.19:0,54,2369	0/0:17,0:17:51.17:0,51,2163	0/0:33,0:33:99:0,99,4337	0/0:24,0:24:72.25:0,72,3167	0/0:18,0:18:51.15:0,51,2166	0/0:25,0:25:75.26:0,75,3203	0/0:26,0:23:69.22:0,69,2880	0/0:26,0:26:75.24:0,75,3076	0/0:40,0:40:99:0,117,5037	0/0:18,0:18:54.19:0,54,2460	0/0:16,0:16:42.14:0,42,1918	0/0:27,0:27:81.27:0,81,3614	0/0:22,0:22:66.23:0,66,2993	0/0:22,0:21:63.22:0,63,2871	0/0:30,0:30:90.31:0,90,4139	0/0:7,0:7:21.07:0,21,972
chr10	108077943	.	T	TC	4301.67	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=8.923;DP=448;FS=0.422;HRun=1;HaplotypeScore=58.8890;InbreedingCoeff=0.9261;MQ=76.34;MQ0=0;MQRankSum=-3.155;QD=38.75;ReadPosRankSum=-1.136;VQSLOD=4.8328;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1413	1/1:0,10:10:27.09:404,27,0	0/0:14,0:14:31.51:0,32,361	0/1:6,0:6:3.49:3,0,141	0/0:11,0:11:27.07:0,27,336	0/0:12,0:12:36.12:0,36,467	0/0:19,0:19:48.14:0,48,609	1/1:1,17:18:54.18:803,54,0	0/0:15,0:15:25.24:0,25,525	0/0:12,0:12:36.12:0,36,467	0/0:6,0:6:18.02:0,18,216	0/0:24,0:24:72.23:0,72,934	0/0:14,0:14:42.14:0,42,545	0/0:16,0:16:48.16:0,48,623	0/0:22,0:22:66.21:0,66,857	0/0:15,0:15:42.13:0,42,534	0/0:21,0:21:60.20:0,60,779	0/0:24,0:24:66.21:0,66,854	1/1:3,21:24:63.20:924,63,0	1/1:1,10:12:27.09:404,27,0	1/1:0,27:27:78.20:1135,78,0	0/0:13,0:13:39.13:0,39,506	0/0:13,0:13:38.97:0,39,450	0/0:18,0:18:51.08:0,51,624	0/0:9,0:9:27.09:0,27,350	0/0:14,0:14:39.12:0,39,495	1/1:0,14:14:42.14:628,42,0	0/0:7,0:7:21.07:0,21,272
chr10	108078660	.	TCTCTCTGG	T	2480.10	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.090;DP=622;FS=0.000;HRun=0;HaplotypeScore=154.6465;InbreedingCoeff=0.9741;MQ=77.99;MQ0=0;MQRankSum=-8.742;QD=67.03;ReadPosRankSum=0.937;VQSLOD=3.7108;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,4428	0/0:5,0:5:15.05:0,15,609	0/0:12,0:12:33.11:0,33,1377	0/0:16,0:16:38.20:0,38,1563	0/0:7,0:7:18.06:0,18,800	0/0:11,0:11:33.10:0,33,1365	0/0:30,0:30:87.25:0,87,3236	0/0:31,0:31:84.27:0,84,3454	0/0:24,0:24:69.24:0,69,3050	0/0:21,0:21:60.19:0,60,2402	0/0:9,0:9:27.08:0,27,1089	1/1:2,35:37:90.78:2575,91,0	0/0:24,0:24:69.24:0,69,2874	0/0:19,0:19:57.20:0,57,2435	0/0:25,0:25:75.26:0,75,3234	0/0:23,0:23:69.24:0,69,3022	0/0:35,0:35:99:0,102,4140	0/0:32,0:32:93.28:0,93,3798	0/0:25,0:25:75.19:0,75,2802	0/0:18,0:18:51.17:0,51,2203	0/0:55,0:55:99:0,160,6916	0/0:11,0:11:27.09:0,27,1193	0/0:13,0:13:36.12:0,36,1522	0/0:32,0:32:93.30:0,93,4006	0/0:13,0:13:39.12:0,39,1602	0/0:24,0:24:69.23:0,69,2858	0/0:16,0:15:48.16:0,48,1958	0/0:16,0:16:48.16:0,48,2123
chr10	108078767	.	GC	G	644.77	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.358;DP=619;FS=5.203;HRun=6;HaplotypeScore=61.6436;InbreedingCoeff=0.9930;MQ=85.11;MQ0=0;MQRankSum=-3.205;QD=25.79;ReadPosRankSum=1.358;VQSLOD=4.0612;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.24:0,78,1004	0/0:8,0:8:21.07:0,21,268	0/0:20,0:20:42.70:0,43,704	0/0:20,0:20:49.03:0,49,612	0/0:15,0:15:39.59:0,40,498	0/0:14,0:14:39.13:0,39,512	0/0:34,0:34:99:0,99,1300	0/0:36,0:36:84.25:0,84,1066	0/0:22,0:22:63.19:0,63,812	0/0:24,0:24:63.20:0,63,816	0/0:22,0:22:66.21:0,66,866	1/1:1,24:25:69.17:740,69,0	0/0:25,0:25:69.22:0,69,899	0/0:21,0:21:57.17:0,57,734	0/0:18,0:18:51.17:0,51,671	0/0:22,0:22:66.21:0,66,869	0/0:26,0:26:75.22:0,75,969	0/0:29,0:29:81.26:0,81,1066	0/0:24,0:24:66.21:0,66,854	0/0:9,0:9:24.08:0,24,316	0/0:50,0:50:99:0,144,1866	0/0:18,0:18:54.16:0,54,694	0/0:11,0:11:30.10:0,30,391	0/0:37,0:37:99:0,111,1460	0/0:17,0:17:45.15:0,45,592	0/0:17,0:17:48.15:0,48,620	0/0:18,0:18:51.17:0,51,671	0/0:11,0:11:33.11:0,33,434
chr10	108079318	.	CT	C	348.33	PASS	AB=0.909;AC=3;AF=0.054;AN=56;BaseQRankSum=7.369;DP=720;FS=5.032;HRun=9;HaplotypeScore=77.2605;InbreedingCoeff=0.5944;MQ=74.61;MQ0=2;MQRankSum=-2.028;QD=8.10;ReadPosRankSum=0.153;VQSLOD=1.8984;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:59,1:60:99:0,129,1704	0/0:13,0:13:33.09:0,33,371	0/1:18,2:19:12.90:13,0,348	0/0:22,1:21:4.78:0,5,358	0/0:25,0:25:54.10:0,54,597	0/0:28,0:28:72.21:0,72,830	0/0:43,1:43:81.09:0,81,1168	0/0:34,0:34:75.69:0,76,866	0/0:15,1:16:14.66:0,15,423	0/0:21,0:21:42.12:0,42,485	0/0:21,0:21:54.15:0,54,613	1/1:5,18:23:48:439,48,0	0/0:24,0:24:66.18:0,66,747	0/0:21,0:21:57.17:0,57,658	0/0:30,0:30:69.17:0,69,769	0/0:24,1:25:38.73:0,39,700	0/0:38,0:38:96.29:0,96,1108	0/0:15,0:15:39.11:0,39,443	0/0:20,1:21:30.16:0,30,589	0/0:14,0:14:36.11:0,36,414	0/0:38,0:38:93.71:0,94,1060	0/0:21,0:21:54.15:0,54,614	0/0:20,0:20:57.14:0,57,645	0/0:33,0:33:96.27:0,96,1091	0/0:20,0:20:60.18:0,60,690	0/0:33,0:34:90.04:0,90,988	0/0:27,0:27:69.20:0,69,796	0/0:11,0:11:30.09:0,30,346
chr10	108079629	.	A	AG	1584.90	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.445;DP=646;FS=3.893;HRun=2;HaplotypeScore=68.5482;InbreedingCoeff=0.9959;MQ=71.88;MQ0=0;MQRankSum=-2.093;QD=37.74;ReadPosRankSum=1.121;VQSLOD=4.3876;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,1744	1/1:2,7:9:21.07:315,21,0	0/0:13,0:13:25.06:0,25,342	0/0:21,0:19:46.34:0,46,522	0/0:24,0:24:66.20:0,66,838	0/0:10,0:10:27.09:0,27,346	0/0:27,0:27:75.24:0,75,974	0/0:32,0:32:87.25:0,87,1090	0/0:32,0:32:93.29:0,93,1192	0/0:13,0:13:39.13:0,39,505	0/0:15,0:15:39.13:0,39,503	1/1:0,33:33:93.31:1391,93,0	0/0:24,0:24:69.22:0,69,894	0/0:21,0:21:63.18:0,63,788	0/0:31,0:31:90.22:0,90,1132	0/0:16,0:16:48.14:0,48,609	0/0:27,0:27:81.26:0,81,1052	0/0:25,0:25:75.22:0,75,957	0/0:11,0:11:30.10:0,30,389	0/0:18,0:18:51.15:0,51,639	0/0:60,0:60:99:0,163,2086	0/0:13,0:13:33.09:0,33,413	0/0:19,0:19:48.14:0,48,598	0/0:32,0:32:96.31:0,96,1243	0/0:12,0:12:33.09:0,33,413	0/0:29,0:29:81.26:0,81,1039	0/0:15,0:15:45.15:0,45,584	0/0:16,0:16:48.16:0,48,623
chr10	108079925	.	GCTGC	G	1543.18	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.276;DP=631;FS=3.383;HRun=0;HaplotypeScore=103.3869;InbreedingCoeff=0.9433;MQ=82.34;MQ0=1;MQRankSum=-4.308;QD=38.58;ReadPosRankSum=1.321;VQSLOD=3.9244;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,2861	1/1:0,6:6:6.02:110,6,0	0/0:21,0:21:57.17:0,57,1223	0/0:18,0:18:42.14:0,42,985	0/0:20,0:20:57.20:0,57,1502	0/0:17,0:17:51.18:0,51,1346	0/0:24,0:24:69.22:0,69,1731	0/0:29,0:29:78.26:0,78,1860	0/0:24,0:24:72.25:0,72,1857	0/0:16,0:16:48.16:0,48,1173	0/0:17,0:17:45.15:0,45,1169	1/1:2,32:33:84.29:1545,84,0	0/0:20,0:20:57.17:0,57,1441	0/0:23,0:23:63.22:0,63,1663	0/0:30,0:30:87.30:0,87,2263	0/0:20,0:20:54.19:0,54,1419	0/0:29,0:29:87.28:0,87,2123	0/0:27,0:28:81.28:0,81,2101	0/0:15,0:15:42.14:0,42,1044	0/0:12,0:12:36.12:0,36,915	0/0:46,0:46:99:0,126,3237	0/0:19,0:19:54.18:0,54,1413	0/0:12,0:12:36.12:0,36,905	0/0:38,0:38:99:0,111,2925	0/0:12,0:12:36.11:0,36,887	0/0:25,0:25:75.26:0,75,1927	0/0:19,0:19:54.19:0,54,1387	0/0:17,0:17:51.09:0,51,1068
chr10	108080385	.	A	ATT	439.68	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.834;DP=551;FS=5.630;HRun=8;HaplotypeScore=66.0709;InbreedingCoeff=0.8050;MQ=69.62;MQ0=1;MQRankSum=0.483;QD=20.94;ReadPosRankSum=0.530;VQSLOD=2.1267;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:42:86.92:0,87,937	0/0:7,0:7:18.05:0,18,201	0/0:11,0:11:9.45:0,9,85	0/0:6,0:5:2.98:0,3,22	0/0:25,0:25:69.17:0,69,769	0/0:26,0:26:72.19:0,72,802	0/0:17,0:17:39.10:0,39,435	0/0:39,0:39:99:0,105,1160	0/0:11,0:11:24.03:0,24,257	0/0:22,0:22:54.13:0,54,602	0/0:19,0:19:54.14:0,54,602	1/1:6,14:21:38.14:534,38,0	0/0:10,0:10:24.06:0,24,267	0/0:13,0:13:39.10:0,39,430	0/0:22,0:22:48.11:0,48,526	0/0:18,0:18:45.10:0,45,490	0/0:32,0:33:78.14:0,78,928	0/0:25,0:25:60.10:0,60,655	0/0:14,0:14:36.09:0,36,401	0/0:25,0:25:63.16:0,63,701	0/0:16,0:16:42.11:0,42,467	0/0:16,0:16:45.12:0,45,501	0/0:13,0:13:33.08:0,33,368	0/0:21,0:21:51.13:0,51,568	0/0:22,0:22:60.14:0,60,657	0/0:21,0:20:45.10:0,45,500	0/0:24,0:24:57.14:0,57,635	0/0:12,0:12:36.10:0,36,401
chr10	108080765	.	AG	A	578.36	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.017;DP=521;FS=5.647;HRun=7;HaplotypeScore=61.5515;InbreedingCoeff=0.8879;MQ=75.09;MQ0=0;MQRankSum=0.404;QD=24.10;ReadPosRankSum=2.290;VQSLOD=4.0907;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.22:0,69,867	0/0:8,0:8:24.08:0,24,298	0/0:13,0:13:29.89:0,30,352	0/0:16,0:16:24.07:0,24,292	0/0:18,0:18:47.93:0,48,591	0/0:10,0:10:27.09:0,27,339	0/0:31,0:31:81.19:0,81,975	0/0:21,0:21:57.18:0,57,706	0/0:24,0:24:63.20:0,63,793	0/0:21,0:21:54.16:0,54,667	0/0:8,0:8:21.07:0,21,261	1/1:2,22:24:66.15:673,66,0	0/0:10,0:10:30.10:0,30,377	0/0:16,0:16:45.13:0,45,553	0/0:21,0:21:60.18:0,60,742	0/0:19,0:19:53.86:0,54,667	0/0:41,0:41:99:0,102,1271	0/0:25,0:25:69.21:0,69,851	0/0:10,0:10:27.09:0,27,339	0/0:16,0:16:45.13:0,45,553	0/0:36,1:37:68.71:0,69,1164	0/0:13,0:13:21.07:0,21,264	0/0:12,0:12:23.78:0,24,301	0/0:27,0:27:72.21:0,72,883	0/0:16,0:16:45.14:0,45,566	0/0:18,0:18:48.14:0,48,591	0/0:18,0:18:48.15:0,48,599	0/0:4,0:4:5.82:0,6,58
chr10	108080985	.	CG	C	148.82	PASS	AB=1.000;AC=3;AF=0.058;AN=52;BaseQRankSum=1.914;DP=361;FS=4.816;HRun=2;HaplotypeScore=48.0346;InbreedingCoeff=0.6044;MQ=36.90;MQ0=37;MQRankSum=-3.068;QD=9.92;ReadPosRankSum=-0.199;VQSLOD=1.2633;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:33:80.81:0,81,1022	0/1:5,0:4:6.11:20,0,6	./.	./.	0/0:12,0:11:17.98:0,18,239	0/0:13,0:12:32.92:0,33,431	0/0:26,0:24:53.99:0,54,726	0/0:13,0:13:36.08:0,36,497	0/0:16,0:13:32.90:0,33,457	0/0:21,0:18:48.04:0,48,615	0/0:15,0:12:26.88:0,27,367	1/1:2,8:8:20.98:232,21,0	0/0:8,0:6:18.03:0,18,227	0/0:10,0:10:23.84:0,24,281	0/0:13,0:12:29.83:0,30,330	0/0:10,0:10:30.09:0,30,428	0/0:22,0:20:48.07:0,48,666	0/0:18,0:15:33.06:0,33,440	0/0:8,0:6:12.01:0,12,148	0/0:19,0:18:44.91:0,45,595	0/0:8,0:6:9.03:0,9,133	0/0:13,0:12:29.96:0,30,338	0/0:10,0:9:14.14:0,14,137	0/0:8,0:6:8.98:0,9,74	0/0:12,0:11:20.86:0,21,311	0/0:17,0:16:45.10:0,45,610	0/0:11,0:11:27.08:0,27,377	0/0:4,0:2:6.01:0,6,69
chr10	108082124	.	T	TTCTGTC	1285.49	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=6.373;DP=699;FS=0.000;HRun=0;HaplotypeScore=149.3029;InbreedingCoeff=0.6433;MQ=71.79;MQ0=3;MQRankSum=-6.604;QD=44.33;ReadPosRankSum=-1.804;VQSLOD=2.8960;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,102,2068	0/1:2,0:2:28.83:29,0,34	0/0:27,0:25:24.04:0,24,442	0/0:38,0:28:21.07:0,21,420	0/0:26,0:26:63.20:0,63,1252	0/0:37,0:37:81.28:0,81,1657	0/0:27,0:27:57.19:0,57,1123	0/0:34,0:34:42.14:0,42,811	0/0:38,0:38:87.19:0,87,1800	0/0:27,0:27:36.09:0,36,674	0/0:23,0:23:60.15:0,60,1119	1/1:17,10:27:54.19:1363,54,0	0/0:15,0:15:33.11:0,33,661	0/0:16,0:16:36.12:0,36,749	0/0:33,0:33:66.21:0,66,1282	0/0:21,0:21:48.16:0,48,995	0/0:29,0:29:65.44:0,65,1270	0/0:21,0:21:51.16:0,51,1000	0/0:22,0:22:24.08:0,24,426	0/0:24,0:24:54.18:0,54,1072	0/0:17,0:17:27.09:0,27,562	0/0:23,0:23:54.19:0,54,1109	0/0:20,0:20:39.11:0,39,690	0/0:25,0:25:51.18:0,51,1057	0/0:19,0:19:51.18:0,51,1040	0/0:28,0:28:51.17:0,51,1026	0/0:20,0:20:36.11:0,36,678	0/0:12,0:12:27.09:0,27,561
chr10	108082144	.	C	CTCTT	212.03	PASS	AB=0.871;AC=2;AF=0.036;AN=56;BaseQRankSum=6.894;DP=694;FS=2.203;HRun=0;HaplotypeScore=120.5757;InbreedingCoeff=-0.0362;MQ=63.33;MQ0=5;MQRankSum=-5.090;QD=7.31;ReadPosRankSum=0.625;VQSLOD=2.8329;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,110,2257	0/1:3,0:3:13.29:13,0,54	0/0:23,0:20:45.69:0,46,883	0/0:38,0:27:51.40:0,51,946	0/0:30,0:30:87.30:0,87,1688	0/0:34,0:34:99:0,102,1987	0/0:26,0:26:67.56:0,68,1337	0/0:31,0:31:90.27:0,90,1595	0/0:36,0:36:99:0,105,1966	0/0:25,0:24:66.17:0,66,1166	0/0:27,0:27:81.28:0,81,1580	0/1:17,8:26:54.79:284,0,55	0/0:12,0:12:36.12:0,36,718	0/0:15,0:15:42.14:0,42,825	0/0:26,0:26:75.24:0,75,1460	0/0:21,0:21:63.20:0,63,1222	0/0:30,0:30:81.22:0,81,1492	0/0:27,0:27:70.01:0,70,1345	0/0:22,0:21:35.02:0,35,882	0/0:22,0:22:66.20:0,66,1246	0/0:16,0:16:45.11:0,45,791	0/0:26,0:26:78.27:0,78,1535	0/0:25,0:25:72.18:0,72,1258	0/0:26,0:26:60.19:0,60,1149	0/0:23,0:23:69.20:0,69,1263	0/0:29,0:29:87.28:0,87,1618	0/0:18,0:18:54.16:0,54,995	0/0:10,0:10:30.08:0,30,561
chr10	108082154	.	T	TTGTCTCTCTC	911.65	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.435;DP=683;FS=2.214;HRun=0;HaplotypeScore=196.1496;InbreedingCoeff=0.8870;MQ=62.65;MQ0=4;MQRankSum=-4.790;QD=31.44;ReadPosRankSum=1.715;VQSLOD=3.5627;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:46:84:0,84,2251	1/1:3,0:3:3.01:137,3,0	0/0:21,0:19:20.88:0,21,375	0/0:34,0:24:14.97:0,15,436	0/0:29,0:29:63.21:0,63,1676	0/0:34,0:34:75.22:0,75,1980	0/0:30,0:30:60.10:0,60,1233	0/0:31,0:31:54.12:0,54,849	0/0:33,0:33:63.05:0,63,1852	0/0:20,0:19:45.11:0,45,1179	0/0:31,0:31:75.11:0,75,1805	1/1:22,4:26:27.09:883,27,0	0/0:15,0:15:27.06:0,27,619	0/0:15,0:15:33.07:0,33,908	0/0:23,0:23:48.15:0,48,1317	0/0:22,0:22:48.16:0,48,1333	0/0:26,0:26:51.13:0,51,1370	0/0:35,0:35:69.63:0,70,1765	0/0:17,0:16:21.03:0,21,581	0/0:23,0:23:60.19:0,60,1555	0/0:14,0:14:36.12:0,36,961	0/0:28,0:28:60.18:0,60,1551	0/0:25,0:25:51.14:0,51,1171	0/0:23,0:23:45.15:0,45,1217	0/0:25,0:25:51.15:0,51,1216	0/0:26,0:26:69.20:0,69,1766	0/0:17,0:17:42.14:0,42,1110	0/0:10,0:10:21.07:0,21,595
chr10	108082174	.	C	CTGTCTCTCTT	1265.63	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.495;DP=692;FS=0.000;HRun=0;HaplotypeScore=205.3703;InbreedingCoeff=0.8714;MQ=76.37;MQ0=1;MQRankSum=-5.019;QD=39.55;ReadPosRankSum=-0.948;VQSLOD=3.0710;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,117,2809	1/1:1,5:7:3.01:159,3,0	0/0:28,0:26:74.33:0,74,1054	0/0:34,0:29:66.85:0,67,953	0/0:27,0:27:78.19:0,78,2024	0/0:32,0:32:90.22:0,90,2353	0/0:28,0:28:78.20:0,78,1676	0/0:35,0:35:99:0,99,1627	0/0:24,0:24:69.21:0,69,2095	0/0:28,0:28:78.18:0,78,1706	0/0:30,0:30:81.23:0,81,2185	1/1:25,0:25:10.03:1208,10,0	0/0:14,0:14:39.08:0,39,840	0/0:15,0:15:45.09:0,45,1126	0/0:19,0:19:57.14:0,57,1533	0/0:24,0:24:72.14:0,72,1710	0/0:26,0:26:69.10:0,69,1688	0/0:37,0:37:98.63:0,99,2377	0/0:19,0:19:51.06:0,51,930	0/0:27,0:27:72.19:0,72,1854	0/0:17,0:17:51.10:0,51,1239	0/0:24,0:24:69.18:0,69,1874	0/0:25,0:25:72.10:0,72,1622	0/0:25,0:25:66.12:0,66,1549	0/0:22,0:22:66.15:0,66,1572	0/0:30,0:30:90.20:0,90,2230	0/0:19,0:19:54.12:0,54,1384	0/0:7,0:7:21.07:0,21,665
chr10	108084246	.	GAA	G	1319.66	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.639;DP=750;FS=4.509;HRun=2;HaplotypeScore=91.8108;InbreedingCoeff=0.9702;MQ=82.65;MQ0=0;MQRankSum=-3.021;QD=43.99;ReadPosRankSum=2.303;VQSLOD=3.5992;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,157,3125	0/0:15,0:15:45.14:0,45,874	0/0:25,0:25:74.05:0,74,1451	0/0:31,0:31:88.12:0,88,1751	0/0:18,0:18:54.19:0,54,1087	0/0:25,0:25:75.26:0,75,1514	0/0:29,0:29:87.30:0,87,1768	0/0:33,0:33:96.32:0,96,1907	0/0:24,0:24:72.25:0,72,1463	0/0:20,0:20:60.20:0,60,1183	0/0:18,0:18:54.19:0,54,1087	1/1:0,30:30:87.30:1415,87,0	0/0:28,0:28:84.29:0,84,1696	0/0:21,0:21:63.22:0,63,1279	0/0:34,0:34:99:0,102,2043	0/0:33,0:33:99:0,99,1975	0/0:30,0:30:90.29:0,90,1768	0/0:23,0:23:66.23:0,66,1339	0/0:19,0:19:57.20:0,57,1158	0/0:17,0:17:48.16:0,48,973	0/0:45,0:45:99:0,135,2728	0/0:20,0:20:57.20:0,57,1158	0/0:17,0:17:49.05:0,49,952	0/0:42,0:42:99:0,126,2550	0/0:28,0:27:81.28:0,81,1636	0/0:37,0:37:99:0,111,2256	0/0:31,0:31:93.31:0,93,1851	0/0:4,0:4:12.02:0,12,207
chr10	108085556	.	CTG	C	522.30	PASS	AB=0.944;AC=15;AF=0.300;AN=50;BaseQRankSum=3.624;DP=449;FS=3.489;HRun=0;HaplotypeScore=59.6602;InbreedingCoeff=-0.1635;MQ=67.99;MQ0=13;MQRankSum=-0.322;QD=1.91;ReadPosRankSum=0.044;VQSLOD=1.1633;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,1:30:17.69:18,0,251	./.	./.	./.	0/0:6,0:6:9.01:0,9,112	0/0:12,0:12:12.04:0,12,171	0/1:25,0:24:29.48:29,0,262	1/1:24,0:22:3.29:53,3,0	0/0:11,0:11:15.05:0,15,223	0/0:16,0:15:15.51:0,16,198	0/0:5,1:5:2.98:0,3,43	0/1:15,0:14:30.65:35,0,31	0/1:10,1:11:39.28:39,0,93	0/1:14,1:15:6.87:7,0,282	0/0:13,0:13:18.06:0,18,259	0/0:8,0:8:13.95:0,14,261	0/0:22,0:22:27.07:0,27,377	0/1:19,1:21:37.47:37,0,268	0/1:7,5:12:30.16:117,0,30	1/1:4,0:4:3.89:35,4,0	0/1:49,3:52:12.40:220,0,12	0/1:7,0:7:14.98:15,0,192	0/0:9,0:9:12:0,12,124	0/1:28,1:29:52.28:52,0,422	0/0:11,0:11:9.03:0,9,121	0/1:26,0:24:8.59:9,0,264	0/0:6,0:6:9.03:0,9,136	0/0:4,0:3:6.02:0,6,88
chr10	108085621	.	G	GAA	309.43	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=6.432;DP=456;FS=2.065;HRun=10;HaplotypeScore=67.3614;InbreedingCoeff=0.6978;MQ=65.50;MQ0=3;MQRankSum=-1.944;QD=7.55;ReadPosRankSum=-3.822;VQSLOD=-0.5846;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:90.09:0,90,913	1/1:0,0:2:6.01:58,6,0	0/0:25,0:18:13.63:0,14,157	0/1:25,0:17:21.32:21,0,99	0/0:7,0:7:17.99:0,18,173	0/0:14,0:14:36.05:0,36,366	0/0:29,0:29:84.19:0,84,854	0/0:21,0:21:41.75:0,42,465	0/0:13,0:13:39.09:0,39,397	0/0:22,0:23:53.84:0,54,530	0/0:10,0:10:30.07:0,30,305	1/1:4,7:13:27.07:351,27,0	0/0:8,0:8:15:0,15,152	0/0:13,0:13:33.05:0,33,335	0/0:11,0:11:24.04:0,24,244	0/0:13,0:13:33.02:0,33,320	0/0:16,0:17:38.82:0,39,449	0/0:26,0:26:66.08:0,66,659	0/0:19,0:20:35.49:0,35,438	0/0:8,0:8:21.04:0,21,214	0/0:17,0:17:36.07:0,36,366	0/0:7,0:7:11.99:0,12,115	0/0:11,0:12:35.82:0,36,347	0/0:30,0:30:75.11:0,75,752	0/0:16,0:16:39.06:0,39,397	0/0:15,0:15:32.59:0,33,388	0/0:13,0:13:33.04:0,33,329	0/0:7,0:7:21.05:0,21,213
chr10	108086249	.	TACACACACACACACACACAC	T	237.06	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.661;DP=510;FS=0.000;HRun=0;HaplotypeScore=221.4395;InbreedingCoeff=0.6180;MQ=62.71;MQ0=24;MQRankSum=-2.865;QD=23.71;ReadPosRankSum=-0.933;VQSLOD=2.3496;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:45.15:0,45,2921	1/1:6,4:10:6.02:317,6,0	0/0:40,0:24:18.04:0,18,487	0/0:37,0:16:12.04:0,12,635	0/0:17,0:17:21.05:0,21,1367	0/0:18,0:16:24.55:0,25,1803	0/0:25,0:24:23.22:0,23,1633	0/0:18,0:18:27.09:0,27,856	0/0:13,0:13:12.04:0,12,835	0/0:24,0:24:47.53:0,48,2783	0/0:12,0:12:18.06:0,18,1255	0/0:15,0:15:15.05:0,15,1002	0/0:15,0:15:23.87:0,24,1843	0/0:8,0:8:12.04:0,12,478	0/0:10,0:8:13.27:0,13,604	0/0:15,0:14:27.09:0,27,1972	0/0:28,0:26:45.15:0,45,3192	0/0:15,0:13:20.36:0,20,1357	0/0:9,0:9:13.56:0,14,245	0/0:8,0:10:12.04:0,12,312	0/0:40,0:37:28.65:0,29,783	0/0:8,0:8:9.03:0,9,277	0/0:12,0:12:9.03:0,9,747	0/0:35,0:34:54.18:0,54,3370	0/0:8,0:8:12.04:0,12,823	0/0:16,0:16:33.11:0,33,2093	0/0:14,0:13:24.08:0,24,601	0/0:7,0:7:18.06:0,18,1374
chr10	108086328	.	AGAGAGGAG	A	169.43	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.614;DP=724;FS=1.559;HRun=0;HaplotypeScore=152.6931;InbreedingCoeff=0.8306;MQ=55.98;MQ0=51;MQRankSum=-2.474;QD=6.28;ReadPosRankSum=1.765;VQSLOD=2.7458;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:78.21:0,78,2149	1/1:4,0:4:0.59:56,1,0	0/0:54,0:11:24.96:0,25,498	0/0:78,0:26:42.99:0,43,657	0/0:16,0:16:33.11:0,33,910	0/0:23,0:22:34.21:0,34,746	0/0:26,0:23:41.76:0,42,958	0/0:29,0:29:84.18:0,84,1678	0/0:26,0:25:63.10:0,63,1538	0/0:32,0:32:90.24:0,90,2477	0/0:12,0:12:27.09:0,27,868	1/1:4,18:21:14.72:215,15,0	0/0:25,0:25:53.38:0,53,1513	0/0:15,0:13:33.11:0,33,1026	0/0:19,0:18:35.92:0,36,1047	0/0:28,0:28:72.43:0,72,2045	0/0:22,0:19:51.62:0,52,1317	0/0:31,0:28:69.24:0,69,2156	0/0:20,0:17:44.23:0,44,759	0/0:15,0:15:29.77:0,30,654	0/0:26,0:25:40.77:0,41,1003	0/0:19,0:19:42.14:0,42,1364	0/0:13,0:12:12.04:0,12,327	0/0:46,0:45:84.50:0,85,2392	0/0:20,0:19:45.15:0,45,1445	0/0:20,0:16:40:0,40,1022	0/0:22,0:17:47.95:0,48,1382	0/0:21,0:18:52.42:0,52,1264
chr10	108086579	.	G	GCCC	1863.15	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.127;DP=644;FS=2.498;HRun=1;HaplotypeScore=89.3360;InbreedingCoeff=0.9977;MQ=70.70;MQ0=0;MQRankSum=-2.426;QD=47.77;ReadPosRankSum=2.257;VQSLOD=4.0077;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:99:0,129,2231	1/1:0,12:13:24.08:567,24,0	0/0:20,0:20:57.19:0,57,946	0/0:15,0:15:45.15:0,45,729	0/0:23,0:23:66.21:0,66,1126	0/0:21,0:21:63.22:0,63,1106	0/0:19,0:19:54.17:0,54,924	0/0:42,0:41:99:0,120,2109	0/0:27,0:27:78.27:0,78,1376	0/0:21,0:21:57.19:0,57,997	0/0:11,0:11:33.10:0,33,544	1/1:0,25:26:60.21:1417,60,0	0/0:27,0:27:78.23:0,78,1315	0/0:17,0:17:48.16:0,48,842	0/0:17,0:17:45.12:0,45,737	0/0:26,0:26:78.25:0,78,1343	0/0:26,0:26:78.27:0,78,1371	0/0:24,0:24:72.23:0,72,1227	0/0:18,0:18:50.91:0,51,858	0/0:14,0:14:42.14:0,42,735	0/0:46,0:46:99:0,138,2363	0/0:18,0:18:54.12:0,54,883	0/0:8,0:8:24.06:0,24,394	0/0:33,0:33:96.29:0,96,1626	0/0:13,0:13:39.13:0,39,683	0/0:34,0:34:99:0,102,1743	0/0:27,0:27:81.19:0,81,1311	0/0:15,0:15:45.15:0,45,793
chr10	108087482	.	TA	T	423.46	PASS	AB=0.828;AC=14;AF=0.250;AN=56;BaseQRankSum=1.882;DP=547;FS=3.583;HRun=16;HaplotypeScore=77.2954;InbreedingCoeff=0.2438;MQ=69.89;MQ0=3;MQRankSum=-0.375;QD=2.19;ReadPosRankSum=-0.596;VQSLOD=-0.5970;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,6:37:26.78:0,27,418	1/1:1,0:4:6.10:18,6,0	0/0:39,0:18:13.56:0,14,148	0/1:22,1:13:11.38:28,0,11	0/0:14,1:15:23.84:0,24,189	0/0:21,0:21:34.78:0,35,258	0/0:25,3:27:6.36:0,6,258	1/1:12,17:29:37.39:224,37,0	0/0:12,0:12:20.83:0,21,159	0/0:17,0:18:14.97:0,15,123	0/0:13,0:13:14.68:0,15,103	0/0:10,0:22:23.25:0,23,146	0/0:20,1:22:17.76:0,18,236	0/0:22,1:24:18.75:0,19,242	0/1:21,4:25:30.64:31,0,164	0/1:11,1:13:0.24:0,0,88	0/0:23,0:24:41.61:0,42,314	0/1:10,2:12:16.66:27,0,17	0/1:8,7:15:7.35:57,0,7	0/1:10,4:14:13.76:42,0,14	0/1:8,6:14:13.61:40,0,14	0/0:8,0:8:0:0,0,0	0/0:11,1:15:14.83:0,15,115	0/0:19,0:19:32.91:0,33,265	0/0:14,0:15:2.78:0,3,114	0/1:25,5:31:11.36:11,0,110	1/1:2,11:13:17.58:106,18,0	0/0:18,1:21:29.52:0,30,320
chr10	108088287	.	TC	T	785.79	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.495;DP=560;FS=0.000;HRun=7;HaplotypeScore=75.4586;InbreedingCoeff=0.7406;MQ=84.25;MQ0=0;MQRankSum=-3.859;QD=21.24;ReadPosRankSum=2.992;VQSLOD=3.3434;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,105,1290	1/1:2,8:10:24.01:234,24,0	0/0:23,0:23:59.17:0,59,661	0/0:22,0:22:47.71:0,48,561	0/0:23,0:23:60.17:0,60,738	0/0:18,0:18:48.15:0,48,600	0/0:21,0:21:57.18:0,57,713	0/0:21,0:21:22.20:0,22,145	0/0:16,0:16:39.11:0,39,465	0/0:23,0:23:57.15:0,57,680	0/0:10,0:10:27.09:0,27,340	1/1:4,23:27:66.15:672,66,0	0/0:13,0:13:39.10:0,39,467	0/0:24,1:25:41.60:0,42,821	0/0:28,0:28:78.24:0,78,964	0/0:18,0:18:48.14:0,48,582	0/0:28,0:28:78.23:0,78,961	0/0:16,0:16:42.02:0,42,473	0/0:18,0:18:1.65:0,2,45	0/0:20,0:20:2.40:0,2,124	0/0:25,0:25:12.51:0,13,96	0/0:17,0:17:42.12:0,42,510	0/0:16,0:16:33.11:0,33,415	0/0:20,0:20:54.17:0,54,678	0/0:23,1:24:63.19:0,63,774	0/0:16,0:16:45.13:0,45,554	0/0:16,0:16:2.47:0,2,27	0/0:5,0:5:15.05:0,15,188
chr10	108088294	.	CA	C	1388.47	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=14.014;DP=551;FS=0.842;HRun=1;HaplotypeScore=73.4213;InbreedingCoeff=0.8967;MQ=85.42;MQ0=0;MQRankSum=-3.541;QD=10.68;ReadPosRankSum=3.211;VQSLOD=1.8376;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1546	0/1:10,0:10:22.09:27,0,22	0/0:25,0:25:74.73:0,75,874	0/0:24,0:24:54.37:0,54,732	0/0:20,0:20:60.18:0,60,824	0/0:19,0:19:57.09:0,57,731	0/0:23,0:23:66.17:0,66,862	1/1:4,7:16:24.47:173,24,0	0/0:16,0:16:48.09:0,48,601	0/0:19,0:19:51.13:0,51,696	0/0:11,0:11:32.99:0,33,434	1/1:25,0:25:26.88:137,27,0	0/0:13,0:13:39.13:0,39,566	0/0:25,0:25:64.79:0,65,938	0/0:28,0:28:84.05:0,84,1100	0/0:18,0:18:54.10:0,54,678	0/0:29,0:29:84.19:0,84,1103	0/0:18,0:18:54.08:0,54,681	1/1:9,9:18:48.84:335,49,0	1/1:4,13:18:17.88:258,18,0	1/1:8,17:26:49.14:359,49,0	0/0:17,0:17:48.08:0,48,619	0/0:11,0:11:33.11:0,33,481	0/0:20,0:20:60.15:0,60,834	0/0:23,0:23:63.15:0,63,825	0/0:16,0:16:45.14:0,45,633	1/1:0,14:17:41.35:289,41,0	0/0:6,0:6:17.73:0,18,230
chr10	108088296	.	CA	C	1125.34	PASS	AB=0.600;AC=9;AF=0.161;AN=56;BaseQRankSum=12.307;DP=544;FS=2.208;HRun=1;HaplotypeScore=73.7711;InbreedingCoeff=0.9113;MQ=84.37;MQ0=0;MQRankSum=-3.518;QD=11.85;ReadPosRankSum=2.105;VQSLOD=2.2763;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1867	0/0:10,0:10:30.09:0,30,404	0/0:25,0:25:74.12:0,74,990	0/0:22,0:22:23.25:0,23,819	0/0:19,0:19:57.19:0,57,895	0/0:19,0:19:54.18:0,54,834	0/0:23,0:23:69.23:0,69,1062	1/1:9,7:16:20.96:145,21,0	0/0:15,0:15:45.15:0,45,708	0/0:17,0:17:48.16:0,48,767	0/0:11,0:11:33.11:0,33,526	0/0:25,0:25:70.84:0,71,838	0/0:14,0:14:42.14:0,42,661	0/0:24,0:24:69.22:0,69,1066	0/0:26,0:26:78.27:0,78,1235	0/0:18,0:18:54.17:0,54,819	0/0:29,0:29:87.29:0,87,1338	0/0:19,0:19:57.19:0,57,883	1/1:13,6:19:46.30:311,46,0	0/1:6,12:18:3.02:227,0,3	1/1:8,17:25:39.28:328,39,0	0/0:17,0:17:48.15:0,48,733	0/0:11,0:11:33.11:0,33,520	0/0:20,0:20:60.20:0,60,959	0/0:20,0:20:57.19:0,57,889	0/0:17,0:17:48.16:0,48,756	1/1:4,13:17:40.98:280,41,0	0/0:7,0:7:21.06:0,21,308
chr10	108092567	.	AAAACAAAC	A	427.11	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.925;DP=668;FS=2.068;HRun=0;HaplotypeScore=160.5176;InbreedingCoeff=0.9333;MQ=54.47;MQ0=18;MQRankSum=-4.961;QD=18.57;ReadPosRankSum=-0.799;VQSLOD=2.8009;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:75.13:0,75,2219	1/1:1,6:7:6.02:158,6,0	0/0:30,0:13:28.58:0,29,581	0/0:41,0:9:14.93:0,15,234	0/0:20,0:20:48.15:0,48,1700	0/0:18,0:18:43.96:0,44,1410	0/0:35,0:34:75.23:0,75,2457	0/0:36,0:36:87.22:0,87,2197	0/0:12,0:12:24.08:0,24,865	0/0:31,0:31:72.50:0,73,2486	0/0:15,0:15:36.12:0,36,1214	1/1:16,0:15:36.69:381,37,0	0/0:17,0:17:39.13:0,39,1412	0/0:15,0:15:39.13:0,39,1457	0/0:25,0:24:63.19:0,63,2254	0/0:29,0:29:78.27:0,78,3063	0/0:35,0:33:62.74:0,63,2647	0/0:22,0:21:48.16:0,48,1797	0/0:30,0:26:63.20:0,63,1807	0/0:16,0:16:30.07:0,30,1037	0/0:19,0:19:41.45:0,41,1683	0/0:24,0:23:60.19:0,60,1943	0/0:16,0:15:39.13:0,39,1557	0/0:39,0:38:87.21:0,87,3134	0/0:20,0:20:54.19:0,54,1895	0/0:30,0:30:65.98:0,66,2375	0/0:20,0:19:45.15:0,45,1783	0/0:18,0:18:51.14:0,51,1483
chr10	108092571	.	C	CA	168.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.039;DP=652;FS=5.597;HRun=4;HaplotypeScore=76.2784;InbreedingCoeff=0.8861;MQ=55.29;MQ0=12;MQRankSum=-2.097;QD=10.50;ReadPosRankSum=-1.283;VQSLOD=0.6168;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:78.23:0,78,921	0/0:6,0:6:5.09:0,5,19	0/0:27,0:14:27.19:0,27,360	0/0:41,0:10:20.60:0,21,180	0/0:19,0:19:54.17:0,54,647	0/0:18,0:17:44.21:0,44,524	0/0:32,0:31:90.27:0,90,1074	0/0:38,0:38:99:0,105,1216	0/0:11,0:11:30.09:0,30,359	0/0:31,0:31:81.71:0,82,963	0/0:15,0:15:42.13:0,42,501	1/1:10,6:15:28.44:262,28,0	0/0:18,0:18:48.12:0,48,549	0/0:15,0:15:45.14:0,45,539	0/0:24,0:23:66.19:0,66,777	0/0:28,0:28:78.24:0,78,928	0/0:32,2:32:42.37:0,42,885	0/0:20,0:19:54.17:0,54,646	0/0:31,0:27:77.86:0,78,876	0/0:17,0:17:45.12:0,45,524	0/0:20,0:21:49.10:0,49,577	0/0:23,0:22:63.16:0,63,735	0/0:14,0:14:42.12:0,42,493	0/0:35,0:34:93.20:0,93,1107	0/0:18,0:18:54.17:0,54,647	0/0:30,0:30:84.20:0,84,1005	0/0:21,0:20:54.14:0,54,625	0/0:17,0:17:51.16:0,51,612
chr10	108092572	.	AAAC	A	515.58	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.688;DP=656;FS=4.798;HRun=0;HaplotypeScore=97.8786;InbreedingCoeff=0.9409;MQ=55.37;MQ0=13;MQRankSum=-4.008;QD=23.44;ReadPosRankSum=0.088;VQSLOD=3.4203;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:81.27:0,81,1639	1/1:6,0:6:6:50,6,0	0/0:29,0:14:29.31:0,29,558	0/0:40,0:11:22.02:0,22,302	0/0:18,0:18:54.18:0,54,1133	0/0:17,0:16:44.21:0,44,963	0/0:32,0:31:90.30:0,90,1861	0/0:36,0:36:99:0,105,2001	0/0:11,0:11:30.10:0,30,617	0/0:30,0:30:81.27:0,81,1710	0/0:16,0:16:45.15:0,45,911	1/1:7,9:15:39.13:577,39,0	0/0:18,0:18:48.16:0,48,1030	0/0:16,0:16:48.16:0,48,986	0/0:24,0:23:69.23:0,69,1494	0/0:28,0:28:78.27:0,78,1784	0/0:34,0:32:77.80:0,78,1712	0/0:20,0:19:54.18:0,54,1165	0/0:33,0:28:81.27:0,81,1592	0/0:17,0:17:45.15:0,45,880	0/0:21,0:21:50.84:0,51,1109	0/0:23,0:22:63.20:0,63,1321	0/0:15,0:15:45.14:0,45,957	0/0:36,0:35:96.24:0,96,2112	0/0:19,0:19:57.19:0,57,1261	0/0:30,0:30:84.24:0,84,1669	0/0:21,0:20:54.18:0,54,1187	0/0:17,0:17:51.17:0,51,1043
chr10	108092575	.	C	CA	160.39	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.738;DP=656;FS=1.181;HRun=3;HaplotypeScore=79.0552;InbreedingCoeff=0.8758;MQ=56.58;MQ0=9;MQRankSum=-3.407;QD=8.91;ReadPosRankSum=-0.368;VQSLOD=0.7642;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:81.25:0,81,968	0/0:6,0:6:4.26:0,4,13	0/0:24,0:16:34.48:0,34,363	0/0:33,0:10:21.29:0,21,186	0/0:20,0:20:57.14:0,57,658	0/0:17,0:16:44.20:0,44,519	0/0:32,0:32:87.25:0,87,1027	0/0:37,0:37:99:0,102,1187	0/0:11,0:11:24.07:0,24,288	0/0:27,0:27:78.71:0,79,934	0/0:19,0:19:51.11:0,51,574	1/1:12,6:17:24.87:254,25,0	0/0:16,0:16:48.12:0,48,554	0/0:17,0:17:51.13:0,51,587	0/0:26,0:25:69.21:0,69,828	0/0:27,0:27:81.25:0,81,971	0/0:35,0:33:80.23:0,80,939	0/0:19,0:19:48.15:0,48,575	0/0:30,0:27:78.24:0,78,933	0/0:18,0:18:39.59:0,40,468	0/0:23,0:23:41.97:0,42,588	0/0:24,0:23:66.15:0,66,760	0/0:15,0:15:45.12:0,45,527	0/0:37,0:36:99:0,99,1174	0/0:21,0:21:57.17:0,57,682	0/0:31,0:31:78.15:0,78,912	0/0:22,0:22:57.14:0,57,668	0/0:17,0:17:51.16:0,51,610
chr10	108094636	.	C	CTG	803.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.076;DP=612;FS=13.403;HRun=0;HaplotypeScore=95.8230;InbreedingCoeff=0.7578;MQ=74.23;MQ0=4;MQRankSum=-0.923;QD=30.91;ReadPosRankSum=2.136;VQSLOD=4.8029;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:39:72.04:0,72,835	0/0:16,0:16:24.05:0,24,267	0/0:30,0:22:35.82:0,36,404	0/0:38,0:33:7.76:0,8,368	0/0:15,0:15:24.07:0,24,289	0/0:9,0:9:15.03:0,15,169	0/0:26,0:26:54.16:0,54,651	0/0:31,0:31:42.13:0,42,506	0/0:25,0:26:66.01:0,66,751	0/0:18,0:18:30.09:0,30,361	0/0:6,0:7:12.04:0,12,143	1/1:10,16:26:27.01:897,27,0	0/0:20,0:20:54.16:0,54,651	0/0:21,0:21:39.12:0,39,466	0/0:21,0:22:44.97:0,45,520	0/0:25,0:29:62.45:0,62,653	0/0:30,0:32:62.86:0,63,715	0/0:22,0:22:51.13:0,51,602	0/0:19,0:21:26.25:0,26,280	0/0:13,0:13:18.06:0,18,217	0/0:33,0:34:47.85:0,48,532	0/0:13,0:13:30.08:0,30,349	0/0:5,0:5:3.01:0,3,36	0/0:23,0:26:56.84:0,57,643	0/0:15,0:15:29.76:0,30,336	0/0:24,0:24:39.10:0,39,458	0/0:23,0:23:42.11:0,42,492	0/0:9,0:11:26.71:0,27,266
chr10	108094682	.	AAGTT	A	5229.12	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.024;DP=552;FS=6.897;HRun=0;HaplotypeScore=94.7067;InbreedingCoeff=0.9985;MQ=86.40;MQ0=0;MQRankSum=-6.314;QD=41.83;ReadPosRankSum=0.113;VQSLOD=4.6020;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,3145	1/1:1,9:10:21.07:392,21,0	0/0:21,0:19:51.18:0,51,1320	0/0:27,0:27:72.20:0,72,1736	0/0:14,0:14:39.13:0,39,1036	0/0:18,0:18:54.19:0,54,1435	0/0:26,0:26:66.21:0,66,1670	1/1:1,22:23:66.19:1131,66,0	0/0:20,0:20:60.21:0,60,1600	0/0:24,0:24:69.22:0,69,1782	0/0:8,0:8:24.07:0,24,581	1/1:3,24:27:60.18:1077,60,0	0/0:15,0:15:45.14:0,45,1107	0/0:18,0:18:54.14:0,54,1380	0/0:20,0:20:57.20:0,57,1514	0/0:22,0:22:60.21:0,60,1577	0/0:32,0:32:96.31:0,96,2461	0/0:22,0:22:66.23:0,66,1738	1/1:2,11:13:36.12:665,36,0	1/1:0,14:14:36.08:635,36,0	1/1:2,22:24:37.41:725,37,0	0/0:13,0:13:30.10:0,30,798	0/0:13,0:13:36.12:0,36,959	0/0:27,0:27:78.27:0,78,2064	0/0:10,0:10:30.10:0,30,794	0/0:20,0:20:60.21:0,60,1537	1/1:1,13:14:33.11:604,33,0	0/0:15,0:15:39.13:0,39,1032
chr10	108095135	.	AG	A	932.76	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.862;DP=578;FS=3.819;HRun=1;HaplotypeScore=58.6976;InbreedingCoeff=0.9867;MQ=79.48;MQ0=0;MQRankSum=-0.435;QD=33.31;ReadPosRankSum=2.324;VQSLOD=3.4823;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.27:0,84,1318	0/0:7,0:7:18.06:0,18,288	0/0:11,0:11:33.08:0,33,485	0/0:18,1:19:30.68:0,31,787	0/0:9,0:9:27.09:0,27,432	0/0:18,0:18:54.17:0,54,837	0/0:39,0:39:99:0,108,1649	0/0:29,0:29:84.29:0,84,1325	0/0:16,0:16:48.16:0,48,766	0/0:9,0:9:27.09:0,27,432	0/0:9,0:9:27.07:0,27,408	1/1:0,28:28:75.22:1028,75,0	0/0:17,0:17:48.15:0,48,740	0/0:25,0:25:72.25:0,72,1148	0/0:19,0:19:54.18:0,54,860	0/0:19,0:19:57.19:0,57,909	0/0:31,0:31:90.31:0,90,1436	0/0:22,0:22:60.20:0,60,957	0/0:15,0:15:42.14:0,42,669	0/0:13,0:13:36.12:0,36,575	0/0:69,0:69:99:0,208,3256	0/0:20,0:20:57.15:0,57,880	0/0:9,0:9:27.07:0,27,408	0/0:30,0:30:84.25:0,84,1294	0/0:20,0:20:57.19:0,57,911	0/0:20,0:20:60.19:0,60,928	0/0:15,0:15:45.15:0,45,719	0/0:10,0:10:30.08:0,30,454
chr10	108097082	.	AGT	A	92.33	PASS	AB=0.899;AC=9;AF=0.161;AN=56;BaseQRankSum=2.751;DP=588;FS=0.000;HRun=0;HaplotypeScore=86.2840;InbreedingCoeff=-0.0330;MQ=71.64;MQ0=7;MQRankSum=0.589;QD=0.68;ReadPosRankSum=1.405;VQSLOD=1.4718;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:36.47:0,36,503	1/1:4,6:9:3.01:33,3,0	0/0:26,0:21:0:0,0,0	0/0:34,0:24:0.89:0,1,2	0/0:15,0:15:24.02:0,24,279	0/0:14,0:15:3.82:0,4,119	0/1:22,3:25:8.77:9,0,269	0/0:24,0:23:26.77:0,27,194	0/0:20,2:22:0.24:0,0,373	0/0:19,0:19:7.78:0,8,311	0/0:8,0:8:6.01:0,6,70	0/0:13,0:24:30.01:0,30,314	0/1:12,2:14:23.35:23,0,78	0/0:15,0:15:15.02:0,15,193	0/0:17,1:18:3.27:0,3,438	0/1:14,2:16:38.60:39,0,267	0/1:25,4:31:52.63:53,0,537	0/0:19,1:29:12.23:0,12,446	0/0:17,0:18:20.94:0,21,186	0/0:13,0:17:8.74:0,9,63	0/0:60,0:60:36.01:0,36,369	0/1:11,0:11:20.78:21,0,103	0/1:11,1:12:20.79:21,0,121	0/0:40,3:42:15.22:0,15,568	0/0:12,0:12:30.08:0,30,426	0/1:14,3:17:23.69:24,0,81	0/0:9,0:10:3:0,3,26	0/0:4,0:5:6.01:0,6,71
chr10	108097870	.	A	AGG	303.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.720;DP=532;FS=14.134;HRun=8;HaplotypeScore=70.0091;InbreedingCoeff=0.9280;MQ=79.10;MQ0=0;MQRankSum=-1.746;QD=15.99;ReadPosRankSum=0.773;VQSLOD=0.3988;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:93.13:0,93,987	0/0:7,0:7:21.02:0,21,210	0/0:14,0:15:23.72:0,24,223	0/0:19,0:18:35.34:0,35,385	0/0:9,0:9:24.05:0,24,257	0/0:13,0:13:39.11:0,39,434	0/0:49,0:49:99:0,120,1318	0/0:22,0:22:36:0,36,385	0/0:18,0:18:13.69:0,14,376	0/0:7,0:7:15.02:0,15,167	0/0:7,0:7:21.06:0,21,234	1/1:2,13:19:29.07:398,29,0	0/0:13,0:13:33.06:0,33,354	0/0:28,0:28:72.11:0,72,763	0/0:17,0:17:39.09:0,39,434	0/0:8,0:8:18.03:0,18,200	0/0:29,0:29:72.15:0,72,786	0/0:23,0:24:54.04:0,54,649	0/0:15,0:15:33.07:0,33,360	0/0:13,0:13:23.96:0,24,250	0/0:41,0:41:96.20:0,96,1050	0/0:15,0:15:39.09:0,39,425	0/0:5,0:5:15.04:0,15,166	0/0:23,0:23:60.15:0,60,667	0/0:14,0:14:39.10:0,39,429	0/0:26,0:26:65.74:0,66,700	0/0:24,0:24:57.11:0,57,621	0/0:14,0:14:39.09:0,39,434
chr10	108099451	.	CG	C	606.68	PASS	AB=0.627;AC=10;AF=0.179;AN=56;BaseQRankSum=2.968;DP=504;FS=16.081;HRun=10;HaplotypeScore=59.3867;InbreedingCoeff=0.5444;MQ=74.67;MQ0=1;MQRankSum=-0.215;QD=6.39;ReadPosRankSum=1.856;VQSLOD=0.3501;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:34.59:0,35,383	1/1:3,3:6:2.98:26,3,0	0/0:26,0:10:2.69:0,3,44	0/0:16,0:11:4.88:0,5,26	0/0:10,0:10:12.66:0,13,138	0/0:24,0:23:43.81:0,44,386	0/0:26,0:26:22.87:0,23,409	1/1:16,0:16:3.69:78,4,0	0/0:13,0:13:30.05:0,30,308	0/0:18,0:18:29.89:0,30,279	0/0:11,0:11:8.92:0,9,64	0/0:21,0:21:17.84:0,18,200	0/0:5,0:5:6:0,6,58	0/0:21,0:21:37.34:0,37,349	0/0:12,3:15:1.02:0,1,199	0/0:11,0:11:24.06:0,24,257	0/0:33,4:37:32.06:0,32,747	0/0:38,0:37:92.90:0,93,906	0/1:6,7:13:4.06:77,0,4	1/1:6,3:9:11.88:91,12,0	0/1:13,25:38:11.30:302,0,11	0/0:14,0:14:14.86:0,15,163	0/0:7,0:7:6:0,6,51	0/0:19,0:19:39.03:0,39,380	0/0:14,0:14:11.99:0,12,103	0/0:23,0:23:16.50:0,17,286	1/1:10,3:13:24.22:179,24,0	0/0:10,0:11:11.94:0,12,100
chr10	108099787	.	A	AACC	3366.58	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.148;DP=635;FS=7.218;HRun=0;HaplotypeScore=99.1386;InbreedingCoeff=0.9890;MQ=71.95;MQ0=0;MQRankSum=-4.984;QD=59.06;ReadPosRankSum=0.597;VQSLOD=5.0810;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1824	1/1:1,13:14:39.13:866,39,0	0/0:12,0:12:36.11:0,36,563	0/0:12,0:12:15.09:0,15,362	0/0:11,0:11:33.11:0,33,529	0/0:26,0:26:78.27:0,78,1288	0/0:25,0:25:69.14:0,69,1063	0/0:30,0:30:90.29:0,90,1433	0/0:20,0:20:60.21:0,60,1000	0/0:17,0:17:45.14:0,45,707	0/0:11,0:11:33.10:0,33,525	1/1:5,34:43:99:2501,111,0	0/0:18,0:18:51.16:0,51,818	0/0:33,0:33:93.32:0,93,1543	0/0:23,0:23:69.23:0,69,1125	0/0:27,0:27:78.27:0,78,1296	0/0:35,0:35:96.33:0,96,1599	0/0:27,0:27:81.28:0,81,1349	0/0:13,0:13:39.09:0,39,610	0/0:9,0:9:27.08:0,27,425	0/0:61,0:61:99:0,172,2757	0/0:18,0:18:48.15:0,48,775	0/0:8,0:8:24.07:0,24,375	0/0:37,0:37:99:0,105,1716	0/0:16,0:16:48.16:0,48,799	0/0:23,0:23:63.21:0,63,1014	0/0:21,0:21:57.19:0,57,949	0/0:8,0:8:24.08:0,24,400
chr10	108100897	.	A	AC	1275.44	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.764;DP=678;FS=2.353;HRun=1;HaplotypeScore=66.1894;InbreedingCoeff=0.9826;MQ=84.84;MQ0=0;MQRankSum=-2.397;QD=35.43;ReadPosRankSum=0.827;VQSLOD=3.8681;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1697	1/1:0,5:5:12.04:180,12,0	0/0:20,0:20:60.11:0,60,713	0/0:21,0:21:59.47:0,59,683	0/0:17,0:17:51.17:0,51,661	0/0:13,0:13:39.13:0,39,504	0/0:32,0:32:93.30:0,93,1205	0/0:34,0:34:99:0,102,1296	0/0:21,0:21:63.20:0,63,818	0/0:20,0:20:60.19:0,60,767	0/0:12,0:12:32.69:0,33,417	1/1:0,31:31:81.27:1212,81,0	0/0:28,0:28:84.27:0,84,1087	0/0:33,0:33:99:0,99,1281	0/0:21,0:21:60.18:0,60,761	0/0:28,0:28:84.27:0,84,1078	0/0:32,0:32:96.31:0,96,1246	0/0:34,0:34:99:0,102,1308	0/0:25,0:25:75.20:0,75,943	0/0:13,0:13:36.12:0,36,467	0/0:41,0:41:99:0,117,1514	0/0:24,0:24:72.21:0,72,903	0/0:19,0:19:57.19:0,57,740	0/0:30,0:30:90.25:0,90,1146	0/0:21,0:21:60.19:0,60,776	0/0:31,0:31:93.30:0,93,1204	0/0:19,0:19:57.14:0,57,717	0/0:8,0:8:24.07:0,24,298
chr10	108101095	.	T	TC	780.98	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.144;DP=657;FS=1.617;HRun=6;HaplotypeScore=65.3871;InbreedingCoeff=0.9795;MQ=78.19;MQ0=0;MQRankSum=-0.127;QD=27.89;ReadPosRankSum=1.578;VQSLOD=4.3053;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1162	0/0:13,0:13:33.07:0,33,333	0/0:16,0:16:33.36:0,33,301	0/0:16,0:16:20.11:0,20,309	0/0:17,0:17:48.06:0,48,477	0/0:15,0:15:42.06:0,42,417	0/0:42,0:42:99:0,111,1132	0/0:21,0:21:54.07:0,54,530	0/0:29,0:29:81.18:0,81,826	0/0:22,0:22:51.08:0,51,510	0/0:12,0:12:24.05:0,24,244	0/0:40,0:40:99:0,114,1163	0/0:22,0:22:60.13:0,60,610	0/0:35,0:35:93.20:0,93,948	0/0:26,0:26:66.14:0,66,673	0/0:21,0:21:54.08:0,54,541	0/0:43,0:43:99:0,123,1255	0/0:31,0:31:78.13:0,78,784	0/0:18,0:18:42.08:0,42,423	0/0:8,0:8:15.03:0,15,153	0/0:50,0:50:99:0,132,1346	0/0:13,0:13:33.06:0,33,330	0/0:14,0:14:36.08:0,36,367	0/0:35,0:35:90.19:0,90,918	0/0:14,0:14:39.09:0,39,397	1/1:2,21:23:57.18:711,57,0	0/0:16,0:16:45.10:0,45,457	1/1:0,5:5:15.05:189,15,0
chr10	108101758	.	C	CA	444.63	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.052;DP=616;FS=2.409;HRun=1;HaplotypeScore=57.5229;InbreedingCoeff=0.9952;MQ=88.36;MQ0=0;MQRankSum=-2.783;QD=37.05;ReadPosRankSum=1.015;VQSLOD=4.0244;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1480	1/1:0,12:12:36.12:539,36,0	0/0:30,0:30:77.65:0,78,917	0/0:14,0:14:39.03:0,39,457	0/0:16,0:16:48.16:0,48,623	0/0:24,0:24:66.21:0,66,857	0/0:21,0:21:63.18:0,63,801	0/0:31,0:31:87.28:0,87,1119	0/0:27,0:27:78.25:0,78,1013	0/0:29,0:29:87.28:0,87,1130	0/0:11,0:11:30.10:0,30,389	0/0:24,0:24:72.21:0,72,917	0/0:17,0:17:45.15:0,45,584	0/0:18,0:18:51.17:0,51,661	0/0:19,0:19:57.19:0,57,740	0/0:21,0:21:63.19:0,63,804	0/0:30,0:30:87.28:0,87,1130	0/0:33,0:33:96.28:0,96,1228	0/0:30,0:30:84.25:0,84,1062	0/0:19,0:19:57.19:0,57,739	0/0:28,0:28:81.25:0,81,1036	0/0:13,0:13:39.13:0,39,506	0/0:22,0:22:66.20:0,66,839	0/0:27,0:27:78.25:0,78,1013	0/0:14,0:14:42.14:0,42,545	0/0:22,0:22:63.20:0,63,818	0/0:19,0:19:57.19:0,57,740	0/0:7,0:7:21.07:0,21,273
chr10	108102563	.	GGT	G	1173.03	PASS	AB=0.969;AC=27;AF=0.519;AN=52;BaseQRankSum=6.352;DP=539;FS=10.173;HRun=0;HaplotypeScore=79.9651;InbreedingCoeff=0.2927;MQ=53.86;MQ0=29;MQRankSum=0.191;QD=3.64;ReadPosRankSum=3.837;VQSLOD=1.0930;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,1:23:26.25:257,26,0	0/1:7,0:7:15.43:15,0,24	./.	./.	0/1:9,2:11:23.92:24,0,65	0/1:13,0:13:17.47:17,0,143	0/0:21,0:20:9.50:0,10,122	0/0:20,0:17:0:0,0,0	1/1:14,8:22:14.47:145,14,0	0/0:16,0:13:11.95:0,12,198	0/0:2,0:2:3.01:0,3,45	0/0:19,0:19:5.83:0,6,38	0/0:17,0:17:8.94:0,9,99	0/0:24,0:24:12.99:0,13,317	1/1:17,5:23:8.22:55,8,0	0/0:27,0:26:33.08:0,33,424	1/1:20,9:28:15.04:165,15,0	1/1:18,15:34:42.04:355,42,0	1/1:8,0:12:5.95:22,6,0	1/1:4,0:10:8.52:42,9,0	1/1:24,0:42:5.68:28,6,0	0/0:12,0:11:6.73:0,7,182	0/1:10,0:10:20.70:21,0,109	0/1:27,2:27:35.83:36,0,275	1/1:10,4:11:8.69:61,9,0	0/1:11,0:11:11.63:12,0,175	1/1:8,0:22:13.67:68,14,0	0/1:8,0:7:26.71:27,0,32
chr10	108105077	.	AG	A	1625.49	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.001;DP=811;FS=5.699;HRun=1;HaplotypeScore=80.6239;InbreedingCoeff=0.9978;MQ=83.64;MQ0=0;MQRankSum=-0.643;QD=36.94;ReadPosRankSum=1.303;VQSLOD=4.1465;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,157,2485	1/1:0,11:11:33.11:461,33,0	0/0:32,0:32:95.88:0,96,1409	0/0:23,0:23:66.01:0,66,997	0/0:18,0:18:54.18:0,54,861	0/0:25,0:25:75.26:0,75,1199	0/0:34,0:34:99:0,102,1556	0/0:26,0:26:75.26:0,75,1200	0/0:23,0:23:69.24:0,69,1103	0/0:25,0:25:75.26:0,75,1198	0/0:27,0:27:81.28:0,81,1294	1/1:1,32:33:93.30:1286,93,0	0/0:32,0:32:96.33:0,96,1532	0/0:40,0:40:99:0,120,1849	0/0:44,0:44:99:0,132,2082	0/0:38,0:38:99:0,114,1817	0/0:30,0:30:90.29:0,90,1408	0/0:28,0:28:84.29:0,84,1339	0/0:18,0:18:54.18:0,54,841	0/0:22,0:22:63.19:0,63,955	0/0:59,0:59:99:0,178,2812	0/0:26,0:26:78.25:0,78,1224	0/0:30,0:30:90.26:0,90,1411	0/0:29,0:29:87.28:0,87,1363	0/0:24,0:24:72.23:0,72,1125	0/0:26,0:26:78.27:0,78,1246	0/0:29,0:28:87.30:0,87,1387	0/0:7,0:7:21.07:0,21,336
chr10	108105165	.	G	GCA	2407.72	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.840;DP=864;FS=4.255;HRun=0;HaplotypeScore=103.7466;InbreedingCoeff=0.9908;MQ=65.27;MQ0=3;MQRankSum=0.940;QD=47.21;ReadPosRankSum=0.802;VQSLOD=4.2312;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,150,2022	1/1:1,15:16:48.16:839,48,0	0/0:27,0:16:32.31:0,32,283	0/0:31,0:17:14.64:0,15,135	0/0:25,0:25:75.23:0,75,996	0/0:22,0:22:57.16:0,57,739	0/0:28,0:28:78.22:0,78,1018	0/0:24,0:24:39.11:0,39,500	0/0:31,0:31:87.27:0,87,1149	0/0:32,0:32:84.28:0,84,1136	0/0:18,0:18:45.15:0,45,604	1/1:8,27:35:99:1690,99,0	0/0:39,0:39:99:0,117,1560	0/0:27,0:27:69.21:0,69,915	0/0:41,0:41:99:0,105,1397	0/0:33,0:33:87.27:0,87,1158	0/0:43,0:43:99:0,126,1685	0/0:29,0:29:81.27:0,81,1093	0/0:31,0:31:90.27:0,90,1186	0/0:27,0:27:81.27:0,81,1096	0/0:84,0:84:99:0,220,2904	0/0:25,0:25:69.23:0,69,933	0/0:14,0:14:36.12:0,36,487	0/0:27,0:27:75.25:0,75,1014	0/0:34,0:34:90.26:0,90,1196	0/0:25,0:25:69.22:0,69,919	0/0:24,0:23:72.24:0,72,969	0/0:14,0:14:42.14:0,42,566
chr10	108106111	.	A	AGTGGGGCT	2582.37	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.673;DP=676;FS=1.663;HRun=0;HaplotypeScore=166.1872;InbreedingCoeff=0.9753;MQ=84.79;MQ0=0;MQRankSum=-7.546;QD=83.30;ReadPosRankSum=-1.708;VQSLOD=3.2049;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,123,3039	0/0:14,0:14:27.09:0,27,692	0/0:29,0:29:48.80:0,49,1246	0/0:25,0:25:48.16:0,48,1122	0/0:22,0:22:48.15:0,48,1184	0/0:20,0:20:54.15:0,54,1294	0/0:28,0:28:60.11:0,60,1346	0/0:22,0:22:36.12:0,36,904	0/0:18,0:18:45.15:0,45,1175	0/0:27,0:27:63.21:0,63,1529	0/0:13,0:13:24.08:0,24,584	1/1:16,15:31:69.24:2677,69,0	0/0:24,0:24:57.18:0,57,1404	0/0:24,0:24:57.20:0,57,1488	0/0:21,0:21:54.14:0,54,1218	0/0:31,0:31:81.25:0,81,1981	0/0:24,0:24:60.18:0,60,1442	0/0:21,0:21:48.16:0,48,1214	0/0:17,0:17:24.08:0,24,595	0/0:17,0:17:33.11:0,33,862	0/0:47,0:47:99:0,114,2817	0/0:10,0:10:21.07:0,21,545	0/0:23,0:23:42.14:0,42,1048	0/0:32,0:32:81.28:0,81,2030	0/0:16,0:16:39.11:0,39,933	0/0:24,0:24:57.20:0,57,1466	0/0:27,0:27:60.19:0,60,1482	0/0:10,0:10:15.05:0,15,392
chr10	108106510	.	AAGAG	A	345.31	PASS	AB=0.981;AC=12;AF=0.300;AN=40;BaseQRankSum=3.581;DP=532;FS=37.427;HRun=0;HaplotypeScore=99.0159;InbreedingCoeff=0.2718;MQ=54.20;MQ0=23;MQRankSum=-0.450;QD=1.79;ReadPosRankSum=-1.135;VQSLOD=-0.1470;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:19.24:19,0,35	./.	./.	./.	0/0:18,0:17:5.98:0,6,46	0/0:11,0:11:5.95:0,6,42	0/0:24,0:24:20.98:0,21,351	./.	0/0:17,0:17:2.61:0,3,12	0/0:21,0:20:17.49:0,17,190	0/0:14,0:13:2.50:0,2,9	./.	0/0:8,0:8:3.01:0,3,39	0/0:22,0:19:12.02:0,12,201	0/0:10,0:14:12.04:0,12,256	0/0:22,0:22:15.62:0,16,372	1/1:20,11:30:12.03:165,12,0	1/1:11,6:17:8.12:136,8,0	./.	./.	0/1:27,0:23:4.85:5,0,43	0/0:10,0:10:3:0,3,25	1/1:18,0:18:2.98:22,3,0	0/1:27,1:27:52.65:53,0,101	./.	0/1:22,1:22:30.15:30,0,141	1/1:20,0:20:6.94:48,7,0	0/0:15,0:13:9.03:0,9,175
chr10	108107452	.	A	AC	503.34	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.940;DP=712;FS=5.075;HRun=4;HaplotypeScore=74.5600;InbreedingCoeff=0.9999;MQ=84.76;MQ0=0;MQRankSum=-2.570;QD=31.46;ReadPosRankSum=-0.647;VQSLOD=3.7861;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:84.24:0,84,952	1/1:1,15:16:45.13:598,45,0	0/0:34,0:34:66.15:0,66,852	0/0:19,0:19:44.96:0,45,475	0/0:25,0:25:72.19:0,72,807	0/0:19,0:19:54.14:0,54,602	0/0:18,0:18:51.13:0,51,569	0/0:24,0:24:69.18:0,69,768	0/0:24,0:24:66.18:0,66,741	0/0:22,0:22:63.16:0,63,698	0/0:17,0:17:48.12:0,48,535	0/0:20,0:20:54.15:0,54,611	0/0:26,0:26:75.20:0,75,843	0/0:25,0:25:69.15:0,69,748	0/0:26,0:26:72.14:0,72,792	0/0:28,0:28:84.24:0,84,953	0/0:44,0:44:99:0,126,1418	0/0:26,0:26:66.10:0,66,711	0/0:22,0:22:54.13:0,54,597	0/0:27,0:27:75.21:0,75,851	0/0:49,0:49:99:0,144,1633	0/0:30,0:30:90.26:0,90,1021	0/0:20,0:20:60.17:0,60,681	0/0:28,0:28:78.22:0,78,885	0/0:28,0:28:81.22:0,81,912	0/0:23,0:23:63.16:0,63,700	0/0:16,0:16:45.13:0,45,510	0/0:22,0:22:66.19:0,66,748
chr10	108109847	.	C	CTA	6940.65	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-11.366;DP=557;FS=2.780;HRun=0;HaplotypeScore=66.5476;InbreedingCoeff=0.9965;MQ=73.78;MQ0=0;MQRankSum=0.994;QD=52.58;ReadPosRankSum=-1.368;VQSLOD=4.9744;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,2039	1/1:0,6:6:15.05:305,15,0	0/0:11,0:11:30.09:0,30,424	0/0:10,0:9:24.07:0,24,333	0/0:18,0:18:54.17:0,54,855	0/0:20,0:20:60.17:0,60,939	0/0:28,0:28:81.28:0,81,1311	1/1:0,25:28:81.20:1529,81,0	0/0:23,0:23:66.23:0,66,1075	0/0:18,0:18:54.18:0,54,880	0/0:11,0:11:33.10:0,33,510	1/1:5,31:37:93.32:1844,93,0	0/0:17,0:17:51.16:0,51,801	0/0:14,0:14:42.14:0,42,685	0/0:24,0:23:69.21:0,69,1072	0/0:17,0:17:51.15:0,51,786	0/0:23,0:22:69.24:0,69,1126	0/0:28,0:28:84.29:0,84,1367	1/1:2,9:11:33.11:665,33,0	1/1:2,16:18:42.14:852,42,0	1/1:0,13:13:36.12:732,36,0	0/0:16,0:16:39.13:0,39,633	0/0:13,0:13:39.09:0,39,606	0/0:38,0:38:99:0,111,1800	0/0:18,0:17:54.18:0,54,855	0/0:19,0:19:57.18:0,57,905	1/1:2,16:19:51.17:1014,51,0	0/0:16,0:16:45.07:0,45,649
chr10	108111135	.	AC	A	823.67	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.414;DP=727;FS=2.491;HRun=6;HaplotypeScore=80.4243;InbreedingCoeff=0.9993;MQ=81.47;MQ0=0;MQRankSum=-2.276;QD=28.40;ReadPosRankSum=1.743;VQSLOD=4.3854;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,1480	0/0:11,0:11:33.11:0,33,451	0/0:20,0:20:51.13:0,51,629	0/0:21,0:21:32.63:0,33,456	0/0:22,0:22:63.20:0,63,844	0/0:23,0:23:60.20:0,60,810	0/0:28,0:28:81.23:0,81,1058	0/0:30,0:30:63.17:0,63,790	0/0:25,0:25:72.24:0,72,978	0/0:35,0:35:99:0,99,1336	0/0:20,0:20:54.12:0,54,657	1/1:2,27:29:81.23:919,81,0	0/0:25,0:25:72.20:0,72,947	0/0:34,0:34:96.31:0,96,1296	0/0:24,0:24:66.20:0,66,884	0/0:27,0:27:81.27:0,81,1107	0/0:19,0:19:57.19:0,57,776	0/0:17,0:17:51.15:0,51,677	0/0:14,0:14:36.12:0,36,487	0/0:23,0:23:60.16:0,60,766	0/0:59,0:59:99:0,173,2324	0/0:26,0:26:75.23:0,75,995	0/0:16,0:16:42.09:0,42,522	0/0:40,0:40:99:0,114,1533	0/0:22,0:22:60.18:0,60,790	0/0:36,0:36:99:0,105,1399	0/0:22,0:21:66.21:0,66,884	0/0:19,0:19:57.17:0,57,760
chr10	108111601	.	A	AC	5117.60	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.799;DP=662;FS=1.534;HRun=5;HaplotypeScore=87.1712;InbreedingCoeff=0.9971;MQ=91.07;MQ0=0;MQRankSum=-4.644;QD=30.83;ReadPosRankSum=-1.910;VQSLOD=4.4581;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,159,1708	1/1:2,14:16:45.14:583,45,0	0/0:26,0:26:66.15:0,66,701	0/0:30,0:30:66.57:0,67,723	0/0:22,0:22:58.66:0,59,601	0/0:23,0:23:63.13:0,63,661	0/0:22,0:22:60.15:0,60,645	1/1:2,16:18:48.12:611,48,0	0/0:31,0:31:87.22:0,87,933	0/0:24,0:24:66.17:0,66,708	0/0:20,0:20:54.08:0,54,580	1/1:25,0:25:71.55:528,72,0	0/0:20,0:20:54.10:0,54,563	0/0:18,0:18:48.12:0,48,516	0/0:31,0:31:90.23:0,90,967	0/0:15,0:15:42.10:0,42,451	0/0:22,0:22:57.14:0,57,613	0/0:18,0:18:54.14:0,54,580	1/1:7,20:27:57.11:675,57,0	1/1:1,18:19:48.16:632,48,0	1/1:0,26:26:75.24:985,75,0	0/0:19,0:19:54.13:0,54,580	0/0:19,0:19:42.84:0,43,492	0/0:18,0:18:42.10:0,42,451	0/0:29,0:29:81.12:0,81,846	0/0:29,0:29:75.18:0,75,800	1/1:3,32:35:84.10:1104,84,0	0/0:5,0:5:15.04:0,15,161
chr10	108111605	.	C	CT	2290.23	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=15.418;DP=662;FS=4.138;HRun=0;HaplotypeScore=96.5685;InbreedingCoeff=0.8952;MQ=91.60;MQ0=0;MQRankSum=-0.543;QD=13.88;ReadPosRankSum=0.829;VQSLOD=4.6264;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,160,2222	1/1:17,0:17:41.38:194,41,0	0/0:29,0:29:87.07:0,87,1053	0/0:28,0:28:76.02:0,76,972	0/0:22,0:22:66.17:0,66,868	0/0:22,0:22:63.21:0,63,880	0/0:23,0:23:69.20:0,69,916	1/1:18,0:18:18.08:166,18,0	0/0:29,0:29:87.29:0,87,1215	0/0:25,0:25:72.23:0,72,978	0/0:22,0:22:60.64:0,61,805	1/1:0,25:25:72.25:1126,72,0	0/0:21,0:21:57.98:0,58,751	0/0:19,0:19:57.16:0,57,746	0/0:31,0:31:90.30:0,90,1258	0/0:16,0:16:48.14:0,48,640	0/0:24,0:24:66.17:0,66,868	0/0:19,0:19:54.18:0,54,755	0/1:25,0:25:65.15:128,0,65	1/1:18,0:18:29:207,29,0	1/1:28,0:28:47.47:303,47,0	0/0:20,0:20:60.18:0,60,807	0/0:18,0:18:54.03:0,54,689	0/0:14,0:14:42.14:0,42,587	0/0:28,0:28:84.27:0,84,1156	0/0:29,0:29:84.25:0,84,1127	1/1:34,0:34:55.65:356,56,0	0/0:5,0:5:15.05:0,15,210
chr10	108112022	.	GTTT	G	2749.62	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.104;DP=455;FS=11.699;HRun=10;HaplotypeScore=86.7427;InbreedingCoeff=0.9619;MQ=83.36;MQ0=5;MQRankSum=-2.622;QD=30.89;ReadPosRankSum=1.130;VQSLOD=1.5671;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:68.69:0,69,1304	1/1:0,5:5:12.04:164,12,0	0/0:46,0:26:32.29:0,32,449	0/0:32,0:19:20.69:0,21,398	0/0:21,0:22:60.14:0,60,1140	0/0:11,0:11:33.09:0,33,611	0/0:6,0:6:15.05:0,15,311	1/1:5,16:21:48.14:653,48,0	0/0:8,0:8:24.07:0,24,462	0/0:21,0:21:60.19:0,60,1192	0/0:16,0:16:45.13:0,45,837	1/1:0,3:3:9.03:123,9,0	0/0:8,0:8:24.08:0,24,496	0/0:8,0:8:21.07:0,21,420	0/0:14,0:14:30.53:0,31,581	0/0:13,0:13:30.10:0,30,622	0/0:27,0:28:69.21:0,69,1356	0/0:24,0:23:66.23:0,66,1367	1/1:5,13:18:42.01:489,42,0	1/1:1,18:19:51.16:696,51,0	1/1:0,6:6:15.04:205,15,0	0/0:6,0:6:9.03:0,9,174	0/0:13,0:13:39.13:0,39,774	0/0:6,0:5:15.05:0,15,298	0/0:27,0:28:81.21:0,81,1553	0/0:18,0:21:54.18:0,54,1029	1/1:0,17:17:45.15:614,45,0	0/0:10,0:10:30.10:0,30,622
chr10	108112226	.	T	TGTTTC	3446.15	PASS	AB=0.778;AC=13;AF=0.232;AN=56;BaseQRankSum=6.574;DP=434;FS=9.649;HRun=0;HaplotypeScore=103.5106;InbreedingCoeff=0.8562;MQ=49.50;MQ0=20;MQRankSum=-6.626;QD=36.66;ReadPosRankSum=1.552;VQSLOD=2.9981;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:29:75.06:0,75,1315	1/1:1,2:3:9.03:197,9,0	0/0:12,0:5:13:0,13,77	0/0:6,0:1:3.01:0,3,59	0/0:18,0:18:47.92:0,48,787	0/0:14,0:13:35.97:0,36,595	0/0:24,0:21:53.83:0,54,716	1/1:19,7:23:49.68:959,50,0	0/0:13,0:12:30.06:0,30,584	0/0:16,0:15:45.10:0,45,807	0/0:5,0:3:6:0,6,53	1/1:7,7:13:26.35:602,26,0	0/0:15,0:15:41.72:0,42,657	0/0:12,0:12:23.93:0,24,382	0/0:17,0:16:36.04:0,36,689	0/0:14,0:14:32.81:0,33,377	0/0:34,0:33:74.92:0,75,1189	0/0:20,0:18:45.09:0,45,818	1/1:9,4:8:21.07:479,21,0	0/1:5,1:7:4.65:216,0,5	1/1:11,3:13:24.06:438,24,0	0/0:9,0:8:18.02:0,18,315	0/0:8,0:8:21.03:0,21,376	0/0:26,0:25:57.07:0,57,1104	0/0:13,0:12:20.94:0,21,309	0/0:21,0:21:61.60:0,62,1027	1/1:7,7:13:27.09:556,27,0	0/0:10,0:10:30.02:0,30,499
chr10	108112235	.	T	TTG	963.65	PASS	AB=0.892;AC=13;AF=0.250;AN=52;BaseQRankSum=8.720;DP=461;FS=0.599;HRun=0;HaplotypeScore=81.7258;InbreedingCoeff=0.6836;MQ=46.66;MQ0=28;MQRankSum=-8.423;QD=9.09;ReadPosRankSum=2.258;VQSLOD=3.3441;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:34:80.71:0,81,791	1/1:2,2:4:8.78:88,9,0	0/0:10,0:4:5.33:0,5,27	./.	0/0:20,0:19:51.40:0,51,442	0/0:16,0:15:35.72:0,36,335	0/0:28,0:22:41.42:0,41,369	1/1:23,7:23:24.05:342,24,0	0/0:15,0:14:32.49:0,32,317	0/0:16,0:15:35.95:0,36,365	./.	1/1:11,7:16:8.75:192,9,0	0/0:16,0:16:38.42:0,38,365	0/0:12,0:12:11.66:0,12,111	0/0:22,0:22:36.02:0,36,405	0/0:16,0:16:34.05:0,34,278	0/0:36,0:34:80.76:0,81,758	0/0:22,0:19:44.89:0,45,453	1/1:8,4:7:4.35:154,4,0	0/1:7,1:8:12.75:58,0,13	0/1:8,3:9:3.51:63,0,4	0/0:10,0:9:17.87:0,18,172	0/1:8,0:8:1.06:1,0,140	0/0:26,0:24:50.96:0,51,581	0/0:13,0:12:26.83:0,27,213	0/0:23,0:22:49.65:0,50,466	1/1:8,6:14:18.77:230,19,0	0/0:9,0:8:21.02:0,21,236
chr10	108112241	.	C	CTTT	1348.93	PASS	AB=1.000;AC=16;AF=0.296;AN=54;BaseQRankSum=9.604;DP=444;FS=10.171;HRun=7;HaplotypeScore=81.2254;InbreedingCoeff=0.8618;MQ=43.62;MQ0=31;MQRankSum=-7.986;QD=12.73;ReadPosRankSum=-2.418;VQSLOD=-0.5819;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:29:51.10:0,51,678	1/1:1,2:3:8.24:125,8,0	0/1:3,0:1:0:0,0,0	./.	0/0:18,0:17:30.07:0,30,402	0/0:16,0:15:32.93:0,33,426	0/0:29,0:22:35.92:0,36,432	1/1:18,12:24:39.70:497,40,0	0/0:15,0:14:20.91:0,21,238	0/0:14,0:13:27.06:0,27,357	0/1:4,0:2:0:0,0,0	1/1:10,0:18:26.89:235,27,0	0/0:15,0:15:23.97:0,24,321	0/0:11,0:11:5.28:0,5,80	0/0:23,0:23:44.88:0,45,539	0/0:16,0:16:30.05:0,30,407	0/0:38,0:35:56.92:0,57,724	0/0:21,0:18:38.94:0,39,434	1/1:11,1:7:8.28:30,8,0	1/1:2,4:7:11.21:130,11,0	1/1:4,4:6:8.62:112,9,0	0/0:11,0:10:14.94:0,15,164	0/0:5,0:5:9.03:0,9,122	0/0:26,0:24:32.55:0,33,421	0/0:12,0:11:21.06:0,21,283	0/0:21,0:20:22.40:0,22,494	1/1:6,10:17:26.35:399,26,0	0/0:9,0:8:15.05:0,15,204
chr10	108112424	.	TC	T	414.31	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.145;DP=539;FS=0.000;HRun=5;HaplotypeScore=82.5074;InbreedingCoeff=0.9126;MQ=80.07;MQ0=0;MQRankSum=-3.685;QD=18.01;ReadPosRankSum=1.193;VQSLOD=3.1381;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,99,1334	0/0:5,0:5:12.04:0,12,164	0/0:15,0:15:26.81:0,27,458	0/0:22,0:21:48.13:0,48,602	0/0:17,0:17:44.37:0,44,612	0/0:13,0:13:33.10:0,33,435	0/0:26,0:26:66.20:0,66,882	0/0:15,0:15:39.04:0,39,487	0/0:20,0:20:51.17:0,51,693	0/0:10,0:10:30.09:0,30,395	0/0:11,0:11:33.08:0,33,426	1/1:1,22:23:45.13:509,45,0	0/0:20,0:20:60.16:0,60,784	0/0:15,1:16:36.10:0,36,463	0/0:24,0:24:66.21:0,66,886	0/0:8,0:8:21.07:0,21,287	0/0:40,0:40:99:0,114,1486	0/0:23,0:23:57.12:0,57,724	0/0:18,0:18:39.13:0,39,533	0/0:13,0:13:39.13:0,39,529	0/0:56,0:56:99:0,162,2142	0/0:13,0:13:36.09:0,36,471	0/0:14,0:14:36.11:0,36,475	0/0:29,0:29:75.14:0,75,950	0/0:12,0:12:36.10:0,36,474	0/0:16,0:16:42.11:0,42,541	0/0:17,0:16:39.60:0,40,532	0/0:4,0:4:9.03:0,9,123
chr10	108112531	.	CG	C	2756.59	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=3.249;DP=302;FS=6.537;HRun=1;HaplotypeScore=40.8274;InbreedingCoeff=0.9352;MQ=82.83;MQ0=0;MQRankSum=-2.689;QD=30.29;ReadPosRankSum=-1.992;VQSLOD=2.3527;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.09:0,54,721	./.	0/0:8,0:8:24.07:0,24,342	0/0:12,0:12:29.69:0,30,343	0/0:6,0:6:18.02:0,18,244	0/0:9,0:9:26.62:0,27,317	0/0:21,0:21:63.18:0,63,897	1/1:8,8:16:36.08:404,36,0	0/0:9,0:9:27.08:0,27,380	0/0:4,0:4:12.04:0,12,178	0/0:4,0:4:6.02:0,6,87	1/1:3,14:17:50.98:645,51,0	0/0:6,0:6:18.06:0,18,267	0/0:8,0:8:23.80:0,24,298	0/0:32,0:32:84.20:0,84,1177	0/0:9,0:9:24.08:0,24,357	0/0:15,0:15:42.13:0,42,595	0/0:5,0:5:15.03:0,15,197	1/1:0,21:21:63.09:783,63,0	1/1:0,4:4:8.99:104,9,0	1/1:6,16:22:51.06:619,51,0	0/0:8,0:8:14.97:0,15,174	0/0:7,0:7:14.82:0,15,199	0/0:11,0:11:33.02:0,33,418	0/0:5,0:5:15:0,15,181	0/0:6,0:6:18.02:0,18,244	1/1:2,9:10:30.07:384,30,0	0/0:4,0:4:12.04:0,12,178
chr10	108112556	.	TCC	T	1384.04	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=6.588;DP=258;FS=19.255;HRun=10;HaplotypeScore=47.3688;InbreedingCoeff=0.7548;MQ=69.27;MQ0=0;MQRankSum=-3.739;QD=17.52;ReadPosRankSum=1.697;VQSLOD=0.5117;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:45.09:0,45,597	1/1:0,1:1:3.01:33,3,0	0/1:5,0:6:12.74:13,0,112	0/0:7,0:7:9.03:0,9,141	0/0:2,0:2:2.50:0,2,9	0/0:6,0:6:9.03:0,9,143	0/0:17,0:18:38.54:0,39,482	1/1:4,5:9:21.05:234,21,0	0/0:10,0:10:27.02:0,27,351	0/0:5,0:5:9.02:0,9,103	0/0:4,0:4:9.02:0,9,121	1/1:4,5:9:21.02:224,21,0	0/0:7,0:7:18.04:0,18,242	0/0:8,0:8:18:0,18,214	0/0:18,0:19:44.43:0,44,512	0/0:9,0:10:27.43:0,27,324	0/0:19,0:19:48.06:0,48,623	0/0:4,0:4:8.98:0,9,95	1/1:10,7:17:30:310,30,0	1/1:2,4:6:15.02:156,15,0	1/1:8,13:21:36.09:400,36,0	0/0:8,0:8:11.86:0,12,169	0/0:5,0:5:6.01:0,6,75	0/0:11,0:11:24.49:0,24,328	0/0:2,0:3:5.51:0,6,56	0/0:5,0:5:14.99:0,15,167	1/1:3,7:10:18.02:201,18,0	0/0:4,0:6:14.48:0,14,110
chr10	108112565	.	CCA	C	420.33	PASS	AB=0.965;AC=9;AF=0.161;AN=56;BaseQRankSum=8.831;DP=255;FS=3.909;HRun=0;HaplotypeScore=47.2341;InbreedingCoeff=0.2649;MQ=65.79;MQ0=0;MQRankSum=-2.495;QD=6.00;ReadPosRankSum=3.036;VQSLOD=1.7730;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:51.05:0,51,688	1/1:1,0:1:2.88:15,3,0	0/0:4,0:4:8.07:0,8,125	0/0:7,0:7:11.10:0,11,176	0/0:1,0:1:0:0,0,0	0/0:8,0:8:2.06:0,2,189	0/0:17,0:17:41.92:0,42,529	0/1:13,0:13:25.53:26,0,109	0/0:10,0:10:21.04:0,21,286	0/0:7,0:7:11.98:0,12,100	0/0:4,0:4:9:0,9,125	0/1:9,0:9:27.15:60,0,27	0/0:8,0:8:21.03:0,21,264	0/0:7,0:7:9.03:0,9,142	0/0:18,0:18:35.83:0,36,436	0/0:10,0:10:20.87:0,21,288	0/0:17,0:17:39.08:0,39,545	0/0:4,0:4:9.01:0,9,109	1/1:8,2:10:26.13:190,26,0	0/1:6,1:7:22.38:108,0,22	0/1:18,1:19:0.17:112,0,0	0/0:8,0:8:12.03:0,12,179	0/0:4,0:4:3.01:0,3,49	0/0:11,0:11:24.04:0,24,316	0/0:5,0:5:14.92:0,15,157	0/0:9,0:9:18.04:0,18,226	0/1:11,0:11:47.97:48,0,64	0/0:6,0:6:5.91:0,6,48
chr10	108112930	.	CT	C	5868.23	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.393;DP=594;FS=0.342;HRun=1;HaplotypeScore=58.7907;InbreedingCoeff=0.9939;MQ=83.74;MQ0=0;MQRankSum=-2.136;QD=38.11;ReadPosRankSum=2.071;VQSLOD=5.2845;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1848	1/1:1,3:4:12:146,12,0	0/0:19,0:18:51.09:0,51,655	0/0:18,0:18:54.14:0,54,810	0/0:17,0:17:45.12:0,45,651	0/0:26,0:26:75.17:0,75,1046	0/0:38,0:38:99:0,114,1818	1/1:0,30:30:87.07:1124,87,0	0/0:29,0:29:87.30:0,87,1390	0/0:13,0:13:39.13:0,39,620	0/0:13,0:13:39.11:0,39,564	1/1:0,27:27:75.08:1018,75,0	0/0:18,0:18:54.17:0,54,840	0/0:18,0:18:54.14:0,54,784	0/0:19,0:19:57.19:0,57,905	0/0:13,0:13:39.13:0,39,623	0/0:31,0:31:93.32:0,93,1484	0/0:37,0:37:99:0,108,1640	1/1:0,17:17:50.98:658,51,0	1/1:5,7:12:35.91:393,36,0	1/1:4,37:41:99:1610,120,0	0/0:9,0:9:27.07:0,27,403	0/0:13,0:13:39.11:0,39,572	0/0:22,0:22:66.18:0,66,1027	0/0:9,0:9:27.06:0,27,380	0/0:23,0:23:69.22:0,69,1040	1/1:0,23:23:66.22:919,66,0	0/0:13,0:13:39.13:0,39,619
chr10	108113069	.	C	CCA	665.46	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.488;DP=762;FS=6.599;HRun=0;HaplotypeScore=108.1030;InbreedingCoeff=0.9945;MQ=70.76;MQ0=4;MQRankSum=0.158;QD=26.62;ReadPosRankSum=1.506;VQSLOD=4.9087;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:59:99:0,153,1853	0/0:7,0:7:21.04:0,21,236	0/0:40,0:28:63.12:0,63,719	0/0:35,0:24:37.44:0,37,395	0/0:32,0:33:90.09:0,90,1068	0/0:24,0:24:57.18:0,57,707	0/0:31,0:31:72.23:0,72,893	0/0:23,0:23:42.12:0,42,507	0/0:24,0:24:60.19:0,60,744	0/0:28,0:29:81.08:0,81,972	0/0:10,0:10:27.08:0,27,335	1/1:10,15:25:48.63:760,49,0	0/0:16,0:17:44.96:0,45,521	0/0:24,0:24:60.18:0,60,731	0/0:26,0:26:69.20:0,69,842	0/0:14,0:14:39.12:0,39,483	0/0:23,0:23:54.17:0,54,670	0/0:26,0:27:66.05:0,66,780	0/0:24,0:24:54.12:0,54,611	0/0:15,0:16:32.91:0,33,362	0/0:55,0:55:99:0,138,1709	0/0:31,0:31:50.25:0,50,867	0/0:25,0:26:72.03:0,72,845	0/0:23,0:24:63.03:0,63,758	0/0:35,0:37:99:0,102,1207	0/0:29,0:29:75.24:0,75,929	0/0:29,0:30:72.03:0,72,853	0/0:16,0:17:47.98:0,48,572
chr10	108113208	.	GA	G	6139.85	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=17.885;DP=649;FS=2.344;HRun=2;HaplotypeScore=92.7731;InbreedingCoeff=0.9994;MQ=86.47;MQ0=0;MQRankSum=-1.988;QD=36.55;ReadPosRankSum=0.882;VQSLOD=5.2138;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,2059	1/1:1,12:13:36.12:467,36,0	0/0:35,0:35:99:0,102,1460	0/0:24,0:25:45.66:0,46,839	0/0:16,0:16:48.16:0,48,719	0/0:23,0:22:69.23:0,69,1030	0/0:20,0:20:57.19:0,57,852	1/1:1,28:29:84.27:1091,84,0	0/0:27,0:27:81.25:0,81,1172	0/0:19,0:19:57.19:0,57,855	0/0:12,0:12:36.12:0,36,539	1/1:0,22:22:63.20:818,63,0	0/0:26,0:26:75.25:0,75,1124	0/0:26,0:26:75.24:0,75,1101	0/0:27,0:27:81.27:0,81,1213	0/0:12,0:12:36.11:0,36,518	0/0:29,0:29:87.29:0,87,1302	0/0:30,0:30:87.29:0,87,1304	1/1:1,15:16:45.13:570,45,0	1/1:0,20:20:60.20:779,60,0	1/1:0,39:39:99:1402,108,0	0/0:8,0:8:22.32:0,22,316	0/0:20,0:20:60.20:0,60,894	0/0:22,0:22:66.21:0,66,969	0/0:22,0:22:66.20:0,66,966	0/0:23,0:23:63.21:0,63,944	1/1:1,28:29:78.25:1013,78,0	0/0:13,0:13:39.13:0,39,585
chr10	108114445	.	C	CA	7918.07	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-5.948;DP=836;FS=3.886;HRun=3;HaplotypeScore=81.7235;InbreedingCoeff=0.9971;MQ=92.65;MQ0=0;MQRankSum=-5.853;QD=37.35;ReadPosRankSum=-1.471;VQSLOD=4.6712;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,171,2029	1/1:0,6:6:15.05:210,15,0	0/0:38,0:38:99:0,105,1241	0/0:31,0:31:78.20:0,78,880	0/0:23,0:23:69.21:0,69,827	0/0:23,0:23:66.19:0,66,781	0/0:25,0:25:75.20:0,75,875	1/1:6,44:50:99:1823,135,0	0/0:34,0:34:99:0,99,1188	0/0:33,0:33:93.28:0,93,1107	0/0:27,0:27:72.19:0,72,849	1/1:1,29:30:81.27:1134,81,0	0/0:24,0:24:66.20:0,66,790	0/0:21,0:21:63.19:0,63,756	0/0:33,0:33:99:0,99,1183	0/0:33,0:33:99:0,99,1188	0/0:35,0:35:99:0,105,1218	0/0:25,0:25:75.23:0,75,900	1/1:1,26:27:78.24:1074,78,0	1/1:0,30:30:87.17:1152,87,0	1/1:4,38:42:99:1516,111,0	0/0:34,0:34:96.29:0,96,1152	0/0:30,0:30:87.22:0,87,1027	0/0:30,0:30:90.25:0,90,1056	0/0:21,0:21:60.18:0,60,720	0/0:26,0:26:72.20:0,72,845	1/1:0,27:27:72.08:1008,72,0	0/0:15,0:15:45.14:0,45,540
chr10	108114923	.	C	CA	6332.12	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-15.287;DP=719;FS=1.883;HRun=5;HaplotypeScore=64.7779;InbreedingCoeff=0.9997;MQ=83.22;MQ0=0;MQRankSum=0.880;QD=34.04;ReadPosRankSum=-1.370;VQSLOD=4.8085;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,141,1516	1/1:2,12:14:36.12:471,36,0	0/0:27,0:27:69.16:0,69,730	0/0:17,0:17:28.67:0,29,319	0/0:29,0:29:78.16:0,78,821	0/0:21,0:21:63.14:0,63,668	0/0:30,0:30:90.21:0,90,958	1/1:5,29:35:87.28:1145,87,0	0/0:30,0:30:81.20:0,81,870	0/0:32,0:32:78.16:0,78,821	0/0:25,0:25:69.15:0,69,731	1/1:1,25:26:72.23:948,72,0	0/0:26,0:26:69.17:0,69,742	0/0:14,0:14:39.10:0,39,419	0/0:28,0:28:84.21:0,84,903	0/0:21,0:21:54.13:0,54,580	0/0:27,0:27:60.14:0,60,645	0/0:24,0:24:66.14:0,66,697	1/1:3,22:25:66.69:867,67,0	1/1:3,28:31:81.22:1046,81,0	1/1:2,24:26:69.22:908,69,0	0/0:23,0:23:69.16:0,69,734	0/0:19,0:19:57.14:0,57,613	0/0:23,0:23:69.17:0,69,741	0/0:27,0:27:81.17:0,81,852	0/0:30,0:30:90.23:0,90,967	1/1:1,28:29:72.23:947,72,0	0/0:10,0:10:30.08:0,30,322
chr10	108115794	.	C	CCA	8329.64	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-0.303;DP=677;FS=7.791;HRun=0;HaplotypeScore=87.5507;InbreedingCoeff=0.9959;MQ=84.66;MQ0=0;MQRankSum=-2.965;QD=46.28;ReadPosRankSum=2.016;VQSLOD=5.5909;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,103,1421	1/1:0,8:9:21.07:384,21,0	0/0:22,0:22:59.78:0,60,835	0/0:20,0:20:44.81:0,45,677	0/0:16,0:16:48.10:0,48,630	0/0:12,0:12:33.10:0,33,482	0/0:29,0:29:84.25:0,84,1223	1/1:0,20:20:60.15:979,60,0	0/0:26,0:26:78.23:0,78,1131	0/0:21,0:21:60.17:0,60,824	0/0:9,0:9:24.07:0,24,345	1/1:1,26:27:63.21:1152,63,0	0/0:12,0:12:33.11:0,33,503	0/0:27,0:27:78.22:0,78,1113	0/0:36,0:36:99:0,105,1586	0/0:30,0:30:87.22:0,87,1245	0/0:39,0:39:99:0,117,1681	0/0:34,0:33:99:0,99,1464	1/1:0,12:12:36.10:574,36,0	1/1:0,13:14:36.12:657,36,0	1/1:2,69:72:99:3327,165,0	0/0:21,0:21:57.01:0,57,854	0/0:20,0:20:60.17:0,60,857	0/0:32,0:32:90.28:0,90,1333	0/0:14,0:14:42.10:0,42,579	0/0:35,0:35:99:0,102,1415	1/1:2,24:26:69.23:1257,69,0	0/0:5,0:5:15.05:0,15,230
chr10	108116191	.	GTGCACTGTGGGCCTTCCTTTC	G	3702.69	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.728;DP=726;FS=11.293;HRun=0;HaplotypeScore=387.6402;InbreedingCoeff=0.9988;MQ=81.40;MQ0=0;MQRankSum=-7.676;QD=154.28;ReadPosRankSum=2.254;VQSLOD=2.6462;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,156,12957	0/0:9,0:9:27.09:0,27,2695	0/0:18,0:18:54.18:0,54,3283	0/0:20,0:20:57.17:0,57,3200	0/0:21,0:21:60.18:0,60,5236	0/0:19,0:19:57.20:0,57,5194	0/0:34,0:33:99:0,102,8748	0/0:34,0:34:99:0,99,6692	0/0:30,0:30:90.30:0,90,7915	0/0:30,0:30:84.28:0,84,6935	0/0:15,0:15:45.15:0,45,4017	1/1:0,24:24:63.22:3703,63,0	0/0:19,0:19:57.18:0,57,4893	0/0:29,0:29:87.30:0,87,8105	0/0:39,0:39:99:0,117,10215	0/0:23,0:23:69.24:0,69,6874	0/0:39,0:39:99:0,117,9167	0/0:22,0:22:66.15:0,66,4690	0/0:24,0:24:72.24:0,72,4813	0/0:16,0:16:48.16:0,48,4875	0/0:49,0:49:99:0,147,12863	0/0:18,0:18:54.19:0,54,5021	0/0:19,0:19:57.20:0,57,4878	0/0:32,0:32:96.33:0,96,8775	0/0:24,0:23:72.25:0,72,6815	0/0:25,0:25:72.14:0,72,5689	0/0:30,0:30:90.31:0,90,7774	0/0:12,0:12:36.12:0,36,3193
chr10	108116657	.	GGT	G	61.38	PASS	AB=0.957;AC=9;AF=0.214;AN=42;BaseQRankSum=3.649;DP=583;FS=9.345;HRun=0;HaplotypeScore=90.3247;InbreedingCoeff=0.1056;MQ=67.15;MQ0=22;MQRankSum=0.270;QD=0.43;ReadPosRankSum=2.264;VQSLOD=0.3289;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/0:13,0:13:8.99:0,9,83	0/0:16,0:16:12:0,12,132	0/0:25,0:23:12.02:0,12,157	0/0:21,0:21:0:0,0,0	0/1:16,3:19:51.40:51,0,75	0/0:20,0:18:9.70:0,10,99	0/0:9,0:9:3.01:0,3,44	./.	0/0:20,0:20:14.98:0,15,143	0/0:19,0:19:3.01:0,3,44	./.	0/1:17,0:17:19.26:19,0,61	0/0:31,0:30:30.41:0,30,291	0/1:19,0:19:7.70:8,0,175	./.	1/1:13,0:13:2.96:20,3,0	0/1:42,0:42:13.64:19,0,14	0/1:11,0:10:17.67:37,0,18	0/0:14,0:14:2.99:0,3,24	0/0:29,0:30:11.98:0,12,114	0/0:20,0:19:12.03:0,12,155	0/0:33,0:33:11.86:0,12,106	1/1:20,0:22:5.68:28,6,0	0/0:14,0:12:15.58:0,16,120
chr10	108117836	.	AT	A	2408.05	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=9.995;DP=515;FS=9.974;HRun=1;HaplotypeScore=59.5537;InbreedingCoeff=0.7628;MQ=77.16;MQ0=0;MQRankSum=-2.307;QD=23.15;ReadPosRankSum=-0.691;VQSLOD=2.3639;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1501	0/1:6,0:6:15.24:33,0,15	0/0:17,1:15:4.51:0,5,341	0/0:18,0:17:33.64:0,34,398	0/0:15,0:15:44.98:0,45,605	0/0:16,0:16:48.12:0,48,699	0/0:18,0:18:49.47:0,49,635	1/1:0,13:13:36.10:480,36,0	0/0:28,0:28:78.22:0,78,1149	0/0:20,0:20:60.17:0,60,868	0/0:15,0:15:42.13:0,42,607	0/1:12,0:12:47.57:48,0,48	0/0:14,0:14:39.10:0,39,564	0/0:13,0:13:39.10:0,39,548	0/0:23,0:23:69.18:0,69,1013	0/0:20,0:20:55.58:0,56,835	0/0:26,0:26:74.88:0,75,1071	0/0:19,0:19:54.14:0,54,787	1/1:0,26:26:71.11:847,71,0	1/1:0,11:11:21.01:258,21,0	1/1:2,22:26:25.46:597,25,0	0/0:20,0:20:57.13:0,57,794	0/0:13,0:13:39.11:0,39,565	0/0:30,0:30:90.21:0,90,1279	0/0:15,0:15:45.14:0,45,690	0/0:23,0:23:45.92:0,46,820	1/1:0,10:10:24.08:327,24,0	0/0:9,0:9:15.14:0,15,274
chr10	108117837	.	TC	T	837.15	PASS	AB=0.900;AC=11;AF=0.196;AN=56;BaseQRankSum=11.303;DP=521;FS=13.588;HRun=9;HaplotypeScore=68.2781;InbreedingCoeff=0.8833;MQ=77.98;MQ0=0;MQRankSum=-1.095;QD=8.46;ReadPosRankSum=-0.676;VQSLOD=0.4203;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:84.24:0,84,959	0/0:5,0:5:9.02:0,9,104	0/0:21,0:18:26.06:0,26,277	0/0:20,0:18:30.05:0,30,317	0/0:15,0:15:36.11:0,36,414	0/0:15,0:15:42.12:0,42,485	0/0:17,1:18:11.65:0,12,388	1/1:14,0:14:34.65:190,35,0	0/0:27,0:27:69.18:0,69,778	0/0:20,0:20:48.12:0,48,532	0/0:16,0:16:42.10:0,42,466	0/0:11,0:11:26.99:0,27,270	0/0:14,0:14:33.10:0,33,381	0/0:13,0:13:33.04:0,33,357	0/0:23,0:23:63.17:0,63,717	0/0:19,1:20:26.69:0,27,561	0/0:27,0:27:66.15:0,66,747	0/0:18,0:18:48.10:0,48,539	1/1:28,0:28:56.81:321,57,0	1/1:11,0:11:17.31:109,17,0	1/1:27,0:27:44.30:248,44,0	0/0:20,0:20:48.10:0,48,530	0/0:13,0:13:36.09:0,36,404	0/0:30,0:30:72.20:0,72,820	0/0:15,0:15:42.12:0,42,485	0/0:21,1:22:20.80:0,21,484	1/1:10,0:10:23.48:139,23,0	0/1:8,1:9:6.41:6,0,177
chr10	108118008	.	TCTC	T	4457.46	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.417;DP=629;FS=13.346;HRun=0;HaplotypeScore=112.8712;InbreedingCoeff=0.9930;MQ=79.60;MQ0=2;MQRankSum=-10.677;QD=33.26;ReadPosRankSum=0.631;VQSLOD=4.4485;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,2120	1/1:1,6:7:12:162,12,0	0/0:27,0:26:60.19:0,60,1113	0/0:37,0:33:29.92:0,30,1112	0/0:19,0:19:51.16:0,51,1056	0/0:20,0:20:60.21:0,60,1282	0/0:18,0:18:48.16:0,48,995	1/1:6,22:27:63.19:973,63,0	0/0:35,0:35:96.33:0,96,2046	0/0:25,0:25:66.23:0,66,1426	0/0:12,0:12:36.12:0,36,786	1/1:1,18:19:45.15:713,45,0	0/0:24,0:24:69.20:0,69,1431	0/0:31,0:31:84.29:0,84,1760	0/0:24,0:24:60.18:0,60,1210	0/0:21,0:21:57.20:0,57,1246	0/0:35,0:35:95.91:0,96,2019	0/0:28,0:28:84.27:0,84,1784	1/1:3,14:17:42.13:632,42,0	1/1:1,10:11:24.03:352,24,0	1/1:2,34:35:72.07:1054,72,0	0/0:20,0:20:57.19:0,57,1184	0/0:10,0:10:30.10:0,30,651	0/0:29,0:29:84.29:0,84,1800	0/0:16,0:16:42.13:0,42,867	0/0:21,0:21:60.19:0,60,1195	1/1:1,15:16:36.12:571,36,0	0/0:8,0:8:21.07:0,21,452
chr10	108118153	.	C	CTCCCTCATCT	11854.04	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-6.010;DP=660;FS=7.164;HRun=0;HaplotypeScore=187.9084;InbreedingCoeff=0.9951;MQ=77.63;MQ0=0;MQRankSum=-13.580;QD=89.80;ReadPosRankSum=-2.652;VQSLOD=3.9173;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,3297	1/1:3,2:7:15.05:771,15,0	0/0:17,0:17:41.17:0,41,1052	0/0:20,0:20:48.09:0,48,1049	0/0:13,0:13:36.11:0,36,1028	0/0:25,0:25:69.22:0,69,2072	0/0:32,0:32:87.28:0,87,2653	1/1:9,10:23:57.20:2426,57,0	0/0:29,0:29:84.26:0,84,2482	0/0:26,0:26:75.26:0,75,2333	0/0:11,0:11:33.10:0,33,967	1/1:11,15:29:57.20:2818,57,0	0/0:27,0:27:69.19:0,69,1978	0/0:36,0:36:99:0,102,3038	0/0:21,0:21:60.21:0,60,1833	0/0:28,0:28:78.27:0,78,2391	0/0:39,0:39:99:0,111,3435	0/0:43,0:43:99:0,114,3311	1/1:7,3:16:39.12:1598,39,0	1/1:4,7:17:27.05:1257,27,0	1/1:15,9:26:33.11:1630,33,0	0/0:23,0:23:66.12:0,66,1994	0/0:21,0:21:60.21:0,60,1905	0/0:27,0:27:69.23:0,69,1926	0/0:21,0:21:60.20:0,60,1786	0/0:24,0:24:72.24:0,72,2166	1/1:3,8:14:27.09:1355,27,0	0/0:6,0:6:18.04:0,18,506
chr10	108118809	.	TAAAG	T	7939.59	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=16.785;DP=675;FS=1.984;HRun=0;HaplotypeScore=122.7276;InbreedingCoeff=0.9992;MQ=80.02;MQ0=0;MQRankSum=-9.999;QD=49.01;ReadPosRankSum=-0.368;VQSLOD=5.6971;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,2751	1/1:0,9:9:21.07:411,21,0	0/0:20,0:20:54.14:0,54,1336	0/0:21,0:21:49.87:0,50,1166	0/0:24,0:24:66.21:0,66,1709	0/0:13,0:13:39.13:0,39,1074	0/0:21,0:21:63.22:0,63,1707	1/1:2,32:34:96.31:1834,96,0	0/0:29,0:29:84.29:0,84,2283	0/0:25,0:25:72.25:0,72,1928	0/0:17,0:17:51.16:0,51,1299	1/1:0,24:24:53.71:1037,54,0	0/0:21,0:21:63.22:0,63,1717	0/0:24,0:24:72.25:0,72,1967	0/0:25,0:25:75.26:0,75,1985	0/0:24,0:24:72.23:0,72,1921	0/0:28,0:28:81.26:0,81,2086	0/0:19,0:19:57.20:0,57,1520	1/1:1,18:19:54.12:943,54,0	1/1:2,21:23:60.20:1149,60,0	1/1:0,27:27:63.13:1192,63,0	0/0:35,0:35:99:0,102,2814	0/0:23,0:23:69.23:0,69,1796	0/0:24,0:24:72.25:0,72,1973	0/0:22,0:22:63.22:0,63,1714	0/0:40,1:41:63.77:0,64,3144	1/1:0,26:26:69.24:1375,69,0	0/0:22,0:22:66.23:0,66,1801
chr10	108118996	.	TAC	T	3146.80	PASS	AB=0.913;AC=15;AF=0.268;AN=56;BaseQRankSum=18.666;DP=1028;FS=3.547;HRun=0;HaplotypeScore=164.3891;InbreedingCoeff=0.8795;MQ=69.26;MQ0=1;MQRankSum=-3.446;QD=12.59;ReadPosRankSum=0.357;VQSLOD=3.3716;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:64,2:66:77.25:0,77,2215	1/1:15,0:15:7.82:189,8,0	0/0:51,0:36:41.86:0,42,614	0/0:52,1:37:34.01:0,34,909	0/0:20,0:20:45.15:0,45,718	0/0:20,1:21:13.34:0,13,753	0/0:46,1:47:85.56:0,86,1902	1/1:32,0:32:18:391,18,0	0/0:39,1:40:76.52:0,77,1764	0/0:47,1:48:88.56:0,89,1916	0/0:13,0:13:36.12:0,36,598	1/1:46,0:46:70.21:578,70,0	0/0:52,0:52:99:0,138,2228	0/0:30,2:32:17.67:0,18,1317	0/0:60,0:60:99:0,172,2767	0/0:44,0:44:99:0,111,1761	0/0:36,1:37:52.48:0,52,1395	0/0:34,0:33:86.47:0,86,1377	1/1:25,0:25:10.03:285,10,0	1/1:18,0:18:38.61:278,39,0	1/1:62,0:62:99:984,100,0	0/0:25,0:25:66.23:0,66,1096	0/0:18,0:18:23.37:0,23,723	0/0:45,0:45:79.59:0,80,1852	0/1:19,2:21:21.55:22,0,684	0/0:55,2:57:27.65:0,28,1741	1/1:31,0:31:74.71:616,75,0	0/0:14,0:14:24.06:0,24,363
chr10	108119009	.	ACG	A	8195.37	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=17.527;DP=1030;FS=0.877;HRun=0;HaplotypeScore=156.5350;InbreedingCoeff=0.9991;MQ=59.62;MQ0=3;MQRankSum=-1.987;QD=34.29;ReadPosRankSum=-1.235;VQSLOD=6.0975;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,135,2715	1/1:2,10:12:33.10:483,33,0	0/0:41,0:21:53.53:0,54,719	0/0:55,0:36:37.34:0,37,994	0/0:19,0:19:54.15:0,54,959	0/0:19,0:19:40.14:0,40,913	0/0:48,0:48:99:0,121,2389	1/1:2,31:33:90.11:1210,90,0	0/0:39,0:39:99:0,104,2074	0/0:50,0:50:99:0,122,2411	0/0:12,0:12:36.12:0,36,691	1/1:12,32:45:86.78:1178,87,0	0/0:54,0:54:99:0,155,2662	0/0:37,0:37:70.97:0,71,1719	0/0:61,0:61:99:0,184,3344	0/0:41,0:41:99:0,117,2068	0/0:41,0:41:83.80:0,84,1733	0/0:38,0:37:90.14:0,90,1745	1/1:14,15:29:75.08:937,75,0	1/1:7,10:17:48.14:684,48,0	1/1:22,49:71:99:2528,162,0	0/0:26,0:26:75.21:0,75,1343	0/0:19,0:19:51.04:0,51,915	0/0:53,0:53:99:0,140,2436	0/0:21,0:21:33.57:0,34,845	0/0:44,1:45:40:0,40,1883	1/1:7,25:32:84.16:1175,84,0	0/0:9,0:9:21.07:0,21,401
chr10	108119072	.	GAC	G	7416.94	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=17.032;DP=1042;FS=3.304;HRun=0;HaplotypeScore=173.0651;InbreedingCoeff=0.9899;MQ=60.96;MQ0=2;MQRankSum=-5.173;QD=29.20;ReadPosRankSum=-1.505;VQSLOD=5.8688;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,126,2045	1/1:2,6:8:21.06:256,21,0	0/0:41,0:34:59.67:0,60,1065	0/0:45,0:34:53.44:0,53,828	0/0:21,0:21:51.16:0,51,833	0/0:23,0:23:66.23:0,66,1113	0/0:51,0:51:99:0,132,2223	1/1:10,25:35:75.20:934,75,0	0/0:42,0:42:99:0,108,1822	0/0:42,0:42:99:0,108,1751	0/0:17,0:17:9.61:0,10,692	1/1:6,35:41:99:1384,111,0	0/0:40,0:40:99:0,102,1677	0/0:49,0:49:99:0,138,2296	0/0:46,0:46:99:0,117,1969	0/0:40,0:40:99:0,111,1837	0/0:33,0:33:93.32:0,93,1569	0/0:40,0:40:99:0,105,1740	1/1:4,23:27:69.22:887,69,0	1/1:1,16:17:48.16:618,48,0	1/1:11,94:105:99:2773,223,0	0/0:28,0:28:75.26:0,75,1252	0/0:20,0:20:45.14:0,45,733	0/0:75,0:75:99:0,205,3422	0/0:19,0:19:54.16:0,54,906	0/0:38,0:38:99:0,99,1638	1/1:7,14:21:45.13:565,45,0	0/0:23,0:23:63.15:0,63,1029
chr10	108119150	.	CACACAT	C	6472.67	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=16.603;DP=871;FS=4.529;HRun=0;HaplotypeScore=228.2516;InbreedingCoeff=0.9933;MQ=58.69;MQ0=2;MQRankSum=-14.158;QD=37.41;ReadPosRankSum=-7.796;VQSLOD=2.7775;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,144,4846	1/1:3,2:5:12.03:207,12,0	0/0:20,0:15:27.23:0,27,868	0/0:37,0:27:73.13:0,73,2096	0/0:26,0:26:78.27:0,78,2626	0/0:32,0:32:96.28:0,96,3033	0/0:51,0:51:99:0,147,4899	1/1:2,25:28:20.53:1399,21,0	0/0:39,0:39:99:0,105,3356	0/0:30,0:30:87.30:0,87,2869	0/0:17,0:17:48.15:0,48,1594	1/1:16,26:43:99:1881,108,0	0/0:32,0:32:93.32:0,93,3139	0/0:44,0:44:99:0,120,4087	0/0:44,0:44:99:0,129,4409	0/0:33,0:33:93.29:0,93,3013	0/0:32,0:32:90.31:0,90,3024	0/0:36,0:36:99:0,99,3283	1/1:3,13:16:42.14:926,42,0	1/1:6,9:15:33.58:629,34,0	1/1:25,24:49:44.74:678,45,0	0/0:27,0:27:78.72:0,79,2607	0/0:19,0:19:42.13:0,42,1332	0/0:59,0:59:99:0,147,4754	0/0:15,0:15:45.14:0,45,1499	0/0:34,0:34:96.32:0,96,3265	1/1:8,9:17:45.02:752,45,0	0/0:20,0:20:54.16:0,54,1785
chr10	108119159	.	A	AAGCTTAGTATG	9046.35	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=17.159;DP=888;FS=6.834;HRun=0;HaplotypeScore=330.3949;InbreedingCoeff=0.9693;MQ=58.12;MQ0=1;MQRankSum=-17.401;QD=50.82;ReadPosRankSum=-9.540;VQSLOD=1.7684;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,159,5412	1/1:3,2:5:12.04:515,12,0	0/0:26,0:20:48.11:0,48,1273	0/0:41,0:31:90.20:0,90,2516	0/0:27,0:27:81.28:0,81,2845	0/0:30,0:30:90.29:0,90,3200	0/0:52,0:52:99:0,148,5312	1/1:34,0:34:5.02:1177,5,0	0/0:39,0:39:99:0,114,3973	0/0:31,0:31:93.30:0,93,3098	0/0:16,0:16:48.15:0,48,1682	1/1:32,8:41:99:2894,106,0	0/0:38,0:38:99:0,111,3773	0/0:44,0:44:99:0,129,4625	0/0:47,0:47:99:0,141,5084	0/0:33,0:33:96.33:0,96,3361	0/0:32,0:32:96.33:0,96,3303	0/0:34,0:34:96.31:0,96,3412	1/1:19,0:19:17.43:823,17,0	1/1:9,3:12:35.99:880,36,0	1/1:51,3:54:99:1771,116,0	0/0:26,0:26:75.12:0,75,2715	0/0:18,0:18:45.15:0,45,1546	0/0:52,0:52:99:0,148,5230	0/0:16,0:16:48.16:0,48,1775	0/0:33,0:33:96.33:0,96,3513	1/1:10,3:13:28.55:987,29,0	0/0:21,0:21:63.19:0,63,2102
chr10	108119171	.	A	AC	233.36	PASS	AB=0.818;AC=8;AF=0.143;AN=56;BaseQRankSum=8.635;DP=869;FS=0.000;HRun=0;HaplotypeScore=168.4318;InbreedingCoeff=0.6214;MQ=56.99;MQ0=2;MQRankSum=-7.658;QD=1.85;ReadPosRankSum=-0.109;VQSLOD=2.5739;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,169,2321	1/1:4,2:6:8.89:71,9,0	0/0:32,0:23:66.16:0,66,823	0/0:41,0:30:58.25:0,58,994	0/0:24,0:24:72.24:0,72,1006	0/0:28,0:28:81.25:0,81,1115	0/0:49,0:49:99:0,144,1996	0/0:29,0:29:84.28:0,84,1173	0/0:40,0:40:99:0,117,1634	0/0:28,0:28:84.28:0,84,1162	0/0:12,0:12:36.12:0,36,503	0/1:33,9:42:93.82:168,0,94	0/0:39,0:39:99:0,117,1619	0/0:37,0:37:99:0,108,1493	0/0:48,0:48:99:0,144,1994	0/0:34,0:34:96.31:0,96,1325	0/0:31,0:31:87.29:0,87,1212	0/0:31,0:31:90.28:0,90,1224	0/0:21,0:21:59.99:0,60,789	1/1:9,3:12:8.43:54,8,0	1/1:45,3:53:5.29:45,5,0	0/0:29,0:29:77.99:0,78,1089	0/0:19,0:19:51.17:0,51,707	0/0:46,0:46:99:0,138,1889	0/0:16,0:16:48.16:0,48,671	0/0:34,0:34:93.30:0,93,1286	0/1:10,3:13:31.81:32,0,154	0/0:18,0:18:54.18:0,54,755
chr10	108119175	.	T	TGCACACACGCACGCAC	15504.59	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.513;DP=925;FS=7.833;HRun=0;HaplotypeScore=431.5937;InbreedingCoeff=0.9958;MQ=55.02;MQ0=2;MQRankSum=-14.550;QD=63.03;ReadPosRankSum=-3.850;VQSLOD=3.0967;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,162,6086	1/1:11,1:12:30.05:1761,30,0	0/0:32,0:23:48.82:0,49,1071	0/0:41,0:30:69.06:0,69,1926	0/0:23,0:23:63.17:0,63,2518	0/0:28,0:28:72.19:0,72,2426	0/0:51,0:51:99:0,135,4608	1/1:49,0:49:99:3659,115,0	0/0:40,0:40:99:0,108,4204	0/0:27,0:27:75.25:0,75,2829	0/0:11,0:11:30.06:0,30,1036	1/1:48,3:52:65.17:4020,65,0	0/0:39,0:39:99:0,111,3992	0/0:35,0:35:86.89:0,87,3226	0/0:45,0:45:99:0,129,4799	0/0:33,0:33:84.24:0,84,3203	0/0:30,0:30:84.20:0,84,2700	0/0:29,0:29:84.14:0,84,2483	1/1:25,1:26:50.62:1414,51,0	1/1:15,0:15:14.86:1146,15,0	1/1:73,2:75:21.24:1589,21,0	0/0:26,0:27:66.19:0,66,2523	0/0:18,0:18:42.08:0,42,1196	0/0:45,0:45:99:0,120,4059	0/0:17,0:17:45.13:0,45,1733	0/0:34,0:34:90.25:0,90,2931	1/1:16,1:17:30.10:1915,30,0	0/0:16,0:16:27.05:0,27,1118
chr10	108119549	.	T	TG	4360.38	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-2.742;DP=657;FS=0.000;HRun=8;HaplotypeScore=73.5898;InbreedingCoeff=0.9764;MQ=74.42;MQ0=0;MQRankSum=-1.108;QD=26.11;ReadPosRankSum=-1.117;VQSLOD=5.0092;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,1123	1/1:3,10:13:29.97:313,30,0	0/0:12,0:12:12.16:0,12,210	0/0:14,0:14:19.37:0,19,168	0/0:13,0:13:39.02:0,39,357	0/0:22,0:22:57.02:0,57,522	0/0:41,0:41:99:0,99,906	1/1:4,13:17:36.08:403,36,0	0/0:27,0:27:62.94:0,63,565	0/0:21,0:21:48.01:0,48,433	0/0:11,0:11:24.01:0,24,220	1/1:5,29:34:84.25:966,84,0	0/0:13,0:13:36.02:0,36,329	0/0:27,0:27:68.94:0,69,621	0/0:21,0:23:58.09:0,58,506	0/0:37,0:37:98.97:0,99,890	0/0:38,0:37:99:0,99,905	0/0:19,0:19:48:0,48,434	1/1:5,15:20:45.12:510,45,0	1/1:0,4:4:11.97:122,12,0	1/1:6,50:56:99:1489,129,0	0/0:15,0:15:39.02:0,39,357	0/0:13,0:13:29.95:0,30,265	0/0:39,0:39:99:0,108,980	0/0:18,0:18:41.99:0,42,378	0/0:35,0:35:63:0,63,574	1/1:7,16:23:26.70:558,27,0	0/0:9,0:9:8.99:0,9,82
chr10	108119738	.	GC	G	6506.89	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=17.863;DP=679;FS=3.267;HRun=2;HaplotypeScore=91.3477;InbreedingCoeff=0.9996;MQ=86.82;MQ0=0;MQRankSum=-3.968;QD=35.56;ReadPosRankSum=3.908;VQSLOD=5.3003;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1750	1/1:0,9:9:27.09:351,27,0	0/0:31,0:31:84.26:0,84,1220	0/0:27,0:27:75.25:0,75,1101	0/0:15,0:15:45.10:0,45,612	0/0:16,0:16:45.15:0,45,674	0/0:24,0:24:72.23:0,72,1057	1/1:2,32:34:96.24:1210,96,0	0/0:27,0:27:81.27:0,81,1214	0/0:31,0:31:93.31:0,93,1373	0/0:10,0:10:30.10:0,30,450	1/1:0,30:30:84.27:1091,84,0	0/0:20,0:20:60.20:0,60,896	0/0:27,0:27:81.27:0,81,1213	0/0:23,0:23:69.23:0,69,1032	0/0:26,0:26:78.26:0,78,1154	0/0:36,0:36:99:0,108,1596	0/0:25,0:25:72.24:0,72,1077	1/1:0,17:17:48.16:623,48,0	1/1:0,17:17:45.15:584,45,0	1/1:1,55:56:99:1948,150,0	0/0:17,0:17:48.16:0,48,718	0/0:11,0:11:30.10:0,30,450	0/0:26,0:26:75.25:0,75,1121	0/0:21,0:21:60.20:0,60,900	0/0:30,0:30:84.28:0,84,1258	1/1:0,20:20:54.18:701,54,0	0/0:12,0:12:36.12:0,36,540
chr10	108119925	.	CTG	C	4673.44	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=16.318;DP=707;FS=0.000;HRun=0;HaplotypeScore=116.1282;InbreedingCoeff=0.9951;MQ=83.24;MQ0=0;MQRankSum=-8.691;QD=29.77;ReadPosRankSum=1.333;VQSLOD=6.2966;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,2394	1/1:2,13:15:33.10:455,33,0	0/0:30,0:30:84.29:0,84,1537	0/0:19,0:19:48.13:0,48,813	0/0:15,0:15:32.85:0,33,554	0/0:20,0:20:57.17:0,57,1034	0/0:38,0:38:99:0,105,1893	1/1:3,20:23:60.66:843,61,0	0/0:31,0:31:90.31:0,90,1677	0/0:26,0:26:75.25:0,75,1376	0/0:6,0:6:18.06:0,18,337	1/1:6,27:33:79.61:1102,80,0	0/0:23,0:23:66.23:0,66,1236	0/0:29,0:29:87.30:0,87,1610	0/0:23,0:23:69.24:0,69,1273	0/0:25,0:25:72.23:0,72,1307	0/0:46,0:46:99:0,138,2534	0/0:52,0:52:99:0,148,2734	1/1:5,13:18:36.10:490,36,0	1/1:0,8:8:15.05:216,15,0	1/1:3,38:41:70.17:987,70,0	0/0:19,0:19:51.17:0,51,954	0/0:13,0:13:33.11:0,33,617	0/0:31,0:31:93.32:0,93,1733	0/0:27,0:27:81.26:0,81,1479	0/0:23,0:23:66.23:0,66,1232	1/1:5,14:19:41.18:581,41,0	0/0:9,0:9:24.06:0,24,415
chr10	108120668	.	GAGAGCTAAGTCC	G	5198.84	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.839;DP=591;FS=0.000;HRun=0;HaplotypeScore=205.8594;InbreedingCoeff=0.9364;MQ=89.03;MQ0=0;MQRankSum=-11.099;QD=49.99;ReadPosRankSum=0.026;VQSLOD=4.4385;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,150,8395	1/1:3,4:7:6.02:216,6,0	0/0:22,0:22:45.15:0,45,2234	0/0:25,0:25:60.20:0,60,2685	0/0:16,0:16:39.13:0,39,2305	0/0:35,0:35:96.33:0,96,5427	0/0:20,0:20:57.20:0,57,3155	1/1:8,7:15:21.06:673,21,0	0/0:30,0:30:81.28:0,81,4547	0/0:32,0:32:84.29:0,84,4802	0/0:12,0:12:30.10:0,30,1382	1/1:6,26:32:60.17:2160,60,0	0/0:20,0:20:57.20:0,57,3223	0/0:17,0:17:51.18:0,51,2896	0/0:21,0:21:60.21:0,60,3116	0/0:23,0:22:66.23:0,66,3596	0/0:38,0:38:99:0,99,5317	0/0:18,0:18:51.17:0,51,2656	1/1:7,8:15:27.06:885,27,0	1/1:3,1:4:3.01:108,3,0	1/1:7,10:17:15.05:508,15,0	0/0:24,0:24:51.17:0,51,2748	0/0:14,0:14:36.11:0,36,1869	0/0:25,0:25:72.25:0,72,4257	0/0:10,0:10:27.09:0,27,1484	0/0:30,0:30:72.25:0,72,4105	1/1:7,7:14:18.04:648,18,0	0/0:4,0:4:12.04:0,12,721
chr10	108120893	.	G	GCACGCACATGCACACACA	1995	PASS	AB=0.974;AC=11;AF=0.196;AN=56;BaseQRankSum=4.708;DP=487;FS=16.637;HRun=0;HaplotypeScore=209.3559;InbreedingCoeff=0.5974;MQ=64.09;MQ0=4;MQRankSum=-7.326;QD=24.33;ReadPosRankSum=-3.757;VQSLOD=0.5424;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,4867	1/1:1,2:8:3.01:154,3,0	0/1:20,0:7:15.11:15,0,173	0/0:25,0:15:17.93:0,18,358	0/0:14,0:14:39.08:0,39,1318	0/0:20,0:20:51.16:0,51,2366	0/0:30,0:30:81.26:0,81,3249	0/1:11,0:11:10.50:763,0,10	0/0:26,0:26:75.23:0,75,3099	0/0:17,0:17:51.17:0,51,2182	0/0:6,0:6:18.06:0,18,894	1/1:2,0:11:8.97:95,9,0	0/0:14,0:14:39.12:0,39,1724	0/0:23,0:23:63.17:0,63,2509	0/0:15,0:15:45.15:0,45,1750	0/0:16,0:16:45.14:0,45,1769	0/0:21,0:21:60.18:0,60,2663	0/0:11,0:11:33.10:0,33,1474	1/1:5,0:5:11.06:383,11,0	0/1:11,1:11:7.06:87,0,7	0/0:14,13:45:0.09:0,0,2	0/0:16,0:16:45.13:0,45,1926	0/0:11,0:11:33.11:0,33,1500	0/0:22,0:22:60.19:0,60,2844	0/0:11,0:11:30.10:0,30,1067	0/0:11,0:11:33.10:0,33,1218	1/1:6,4:13:15:654,15,0	0/0:9,0:9:18.06:0,18,927
chr10	108121026	.	TTTAAA	T	1581.09	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=7.094;DP=251;FS=27.764;HRun=0;HaplotypeScore=53.8245;InbreedingCoeff=0.7854;MQ=86.98;MQ0=0;MQRankSum=-4.471;QD=39.53;ReadPosRankSum=-2.489;VQSLOD=1.3142;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:33.11:0,33,964	./.	0/0:24,0:16:6.46:0,6,426	0/0:22,0:12:23.74:0,24,330	0/0:12,0:12:36.12:0,36,959	0/0:12,0:12:36.12:0,36,1138	0/0:3,0:3:9.03:0,9,285	1/1:0,22:22:63.10:1044,63,0	0/0:3,0:3:9.03:0,9,284	0/0:8,0:8:24.08:0,24,698	0/0:4,0:4:12.04:0,12,295	1/1:0,1:1:3.01:63,3,0	0/0:5,0:5:15.05:0,15,385	0/0:10,0:10:30.10:0,30,776	0/0:7,0:7:21.07:0,21,616	0/0:4,0:4:12.04:0,12,299	0/0:29,0:29:87.27:0,87,2381	0/0:19,0:19:52.73:0,53,1535	1/1:0,7:7:21.07:372,21,0	1/1:0,5:5:3.01:63,3,0	1/1:0,4:4:9.03:135,9,0	0/0:2,0:2:6.02:0,6,160	0/0:4,0:4:12.04:0,12,319	0/0:7,0:7:21.07:0,21,633	0/0:10,0:10:30.10:0,30,812	0/0:8,0:8:24.08:0,24,673	1/1:0,1:1:3.01:63,3,0	0/0:7,0:7:21.05:0,21,503
chr10	108121267	.	TTTTTTTTTTTTTTTTTTTTTA	T	1873.05	PASS	AB=0.895;AC=11;AF=0.196;AN=56;BaseQRankSum=9.194;DP=465;FS=23.159;HRun=0;HaplotypeScore=210.5323;InbreedingCoeff=0.6037;MQ=54.96;MQ0=28;MQRankSum=-6.380;QD=30.71;ReadPosRankSum=6.073;VQSLOD=0.7561;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:77.84:0,78,4672	1/1:6,0:6:18.06:644,18,0	0/0:52,0:12:31.39:0,31,772	0/0:39,0:11:22.83:0,23,528	0/0:13,0:13:39.13:0,39,2194	0/0:15,0:15:36.11:0,36,2454	0/0:12,0:12:33.11:0,33,2104	0/1:13,0:13:47.13:87,0,47	0/0:14,0:14:39.13:0,39,2721	0/0:28,0:26:78.27:0,78,5316	0/0:9,0:9:24.08:0,24,1737	0/1:6,0:6:99:188,0,101	0/0:8,0:7:21.07:0,21,1467	0/0:11,0:11:24.08:0,24,1406	0/0:18,0:18:54.19:0,54,3722	0/0:11,0:11:32.14:0,32,2147	0/0:31,0:31:87.25:0,87,5717	0/0:22,0:22:54.19:0,54,3306	0/1:7,6:8:53.27:196,0,53	1/1:12,1:12:17.24:407,17,0	1/1:2,0:1:2.84:14,3,0	0/0:9,0:9:24.08:0,24,1582	0/0:12,0:10:27.09:0,27,1850	0/0:11,0:11:26.88:0,27,1625	0/0:19,0:19:51.18:0,51,3573	0/0:20,0:20:60.20:0,60,3817	1/1:8,0:8:20.76:498,21,0	0/0:21,0:19:57.20:0,57,3633
chr10	108121270	.	TTTTTTTTTTTTTTTTTTA	T	2333.08	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=8.939;DP=464;FS=30.335;HRun=0;HaplotypeScore=184.3910;InbreedingCoeff=0.6983;MQ=55.01;MQ0=28;MQRankSum=-5.692;QD=40.93;ReadPosRankSum=6.739;VQSLOD=1.3681;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:74.28:0,74,3826	1/1:0,6:6:18.06:831,18,0	0/0:52,0:13:20.74:0,21,640	0/0:40,0:11:21.29:0,21,382	0/0:13,0:13:38.90:0,39,1786	0/0:14,0:14:33.11:0,33,2001	0/0:12,0:12:33.07:0,33,1722	0/1:13,0:13:7.90:110,0,8	0/0:14,0:14:39.13:0,39,2357	0/0:28,0:26:78.27:0,78,4483	0/0:9,0:9:24.08:0,24,1419	0/1:6,0:6:47.85:290,0,48	0/0:8,0:7:21.07:0,21,1177	0/0:12,0:12:27.08:0,27,1203	0/0:20,0:20:60.21:0,60,3291	0/0:11,0:11:31.66:0,32,1830	0/0:32,0:32:89.63:0,90,4813	0/0:21,0:21:54.17:0,54,2587	1/1:13,1:8:1.17:203,1,0	1/1:7,3:9:19.18:472,19,0	1/1:2,0:1:2.90:16,3,0	0/0:9,0:9:24.08:0,24,1319	0/0:12,0:10:27.09:0,27,1512	0/0:11,0:11:26.83:0,27,1321	0/0:20,0:20:54.18:0,54,3006	0/0:19,0:19:57.20:0,57,3145	1/1:2,4:6:14.89:574,15,0	0/0:21,0:19:57.17:0,57,3049
chr10	108121296	.	ATCTAGGGAAGGAAAC	A	2463.68	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=7.410;DP=329;FS=8.021;HRun=0;HaplotypeScore=138.3379;InbreedingCoeff=0.8508;MQ=90.81;MQ0=7;MQRankSum=-7.168;QD=94.76;ReadPosRankSum=5.958;VQSLOD=2.9418;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.22:0,63,4405	1/1:1,6:7:21.07:929,21,0	0/0:46,0:30:86.85:0,87,4753	0/0:27,0:17:51.18:0,51,3112	0/0:10,0:10:30.10:0,30,2226	0/0:8,0:8:24.08:0,24,1636	0/0:12,0:12:30.10:0,30,2116	1/1:2,0:2:3.01:133,3,0	0/0:13,0:13:39.12:0,39,2675	0/0:25,0:24:69.24:0,69,5060	0/0:4,0:4:12.04:0,12,772	1/1:1,3:4:9.03:369,9,0	0/0:11,0:11:33.11:0,33,2304	0/0:9,0:9:24.08:0,24,1699	0/0:20,0:20:57.18:0,57,3949	0/0:8,0:8:24.08:0,24,1735	0/0:25,0:24:72.25:0,72,5237	0/0:9,0:9:27.09:0,27,1835	1/1:1,1:2:3.01:133,3,0	1/1:2,3:5:9.03:398,9,0	0/1:1,0:1:0:0,0,0	0/0:4,0:4:12.04:0,12,853	0/0:12,0:12:36.12:0,36,2675	0/0:7,0:7:18.06:0,18,1217	0/0:13,0:13:39.13:0,39,2899	0/0:11,0:11:30.10:0,30,2169	1/1:1,4:5:15.05:664,15,0	0/0:6,0:6:18.06:0,18,1263
chr10	108121299	.	TAG	T	99.76	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=7.462;DP=337;FS=6.387;HRun=0;HaplotypeScore=66.5549;InbreedingCoeff=0.7887;MQ=91.89;MQ0=3;MQRankSum=-6.540;QD=3.99;ReadPosRankSum=5.914;VQSLOD=0.2400;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.24:0,69,1389	1/1:6,1:7:19.66:94,20,0	0/0:42,0:31:86.94:0,87,1650	0/0:27,0:19:53.28:0,53,1088	0/0:10,0:10:30.10:0,30,609	0/0:8,0:8:21.07:0,21,427	0/0:12,0:12:36.11:0,36,684	1/1:0,2:2:2.90:16,3,0	0/0:15,0:15:45.14:0,45,854	0/0:24,0:24:69.24:0,69,1403	0/0:4,0:4:12.04:0,12,243	0/1:4,0:4:6.51:18,0,7	0/0:11,0:11:33.11:0,33,670	0/0:9,0:9:27.09:0,27,533	0/0:19,0:19:57.18:0,57,1117	0/0:8,0:8:24.08:0,24,488	0/0:26,0:25:78.22:0,78,1541	0/0:10,0:10:30.10:0,30,609	1/1:2,0:2:2.80:13,3,0	1/1:4,1:5:8.58:43,9,0	./.	0/0:5,0:5:15.05:0,15,305	0/0:13,0:13:39.13:0,39,781	0/0:7,0:7:18.06:0,18,366	0/0:14,0:14:42.14:0,42,852	0/0:12,0:12:36.11:0,36,691	1/1:4,1:5:14.09:69,14,0	0/0:8,0:8:24.08:0,24,459
chr10	108121304	.	AAGGAAAC	A	846.83	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=7.641;DP=339;FS=4.459;HRun=0;HaplotypeScore=101.1478;InbreedingCoeff=0.8833;MQ=96.06;MQ0=3;MQRankSum=-7.485;QD=38.49;ReadPosRankSum=5.270;VQSLOD=3.2719;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.24:0,69,2769	1/1:6,1:7:21.07:363,21,0	0/0:39,0:31:77.19:0,77,3168	0/0:30,0:22:66.23:0,66,2479	0/0:11,0:11:33.11:0,33,1381	0/0:10,0:10:30.10:0,30,1216	0/0:13,0:13:39.13:0,39,1601	1/1:0,2:2:3.01:53,3,0	0/0:15,0:15:45.15:0,45,1889	0/0:24,0:24:69.24:0,69,2886	0/0:4,0:4:12.04:0,12,424	1/1:3,0:3:9.02:127,9,0	0/0:10,0:10:30.10:0,30,1260	0/0:9,0:9:27.09:0,27,1111	0/0:18,0:18:54.19:0,54,2266	0/0:9,0:9:27.09:0,27,1095	0/0:28,0:27:81.28:0,81,3384	0/0:10,0:10:30.10:0,30,1162	1/1:1,0:1:3.01:51,3,0	1/1:3,1:4:9.03:157,9,0	./.	0/0:5,0:5:15.05:0,15,630	0/0:14,0:14:42.14:0,42,1759	0/0:8,0:8:21.07:0,21,796	0/0:16,0:16:48.16:0,48,1937	0/0:11,0:11:33.11:0,33,1385	1/1:4,1:5:15.05:258,15,0	0/0:9,0:9:27.09:0,27,1104
chr10	108121308	.	AAAC	A	380.12	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=7.560;DP=357;FS=1.885;HRun=0;HaplotypeScore=78.8487;InbreedingCoeff=0.8986;MQ=97.64;MQ0=1;MQRankSum=-7.542;QD=14.08;ReadPosRankSum=4.582;VQSLOD=3.0288;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.22:0,78,1822	1/1:7,0:7:20.94:167,21,0	0/0:35,0:32:89.65:0,90,2069	0/0:28,0:22:66.11:0,66,1465	0/0:11,0:11:33.11:0,33,814	0/0:12,0:12:36.12:0,36,870	0/0:17,0:17:51.18:0,51,1232	1/1:2,3:5:9.02:116,9,0	0/0:16,0:16:48.16:0,48,1183	0/0:24,0:24:69.24:0,69,1692	0/0:3,0:3:9.03:0,9,218	1/1:3,0:3:6.45:48,6,0	0/0:12,0:12:36.12:0,36,873	0/0:9,0:9:27.09:0,27,665	0/0:19,0:19:57.20:0,57,1404	0/0:10,0:10:30.10:0,30,737	0/0:28,0:27:81.28:0,81,1996	0/0:9,0:9:27.09:0,27,632	1/1:1,0:1:2.99:23,3,0	1/1:4,2:6:8.99:73,9,0	./.	0/0:7,0:7:21.07:0,21,490	0/0:16,0:16:48.16:0,48,1178	0/0:11,0:11:30.10:0,30,726	0/0:16,0:16:48.16:0,48,1184	0/0:12,0:12:36.12:0,36,887	1/1:5,0:5:14.95:118,15,0	0/0:9,0:9:27.09:0,27,647
chr10	108121956	.	ATTT	A	4606.96	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.104;DP=601;FS=1.895;HRun=3;HaplotypeScore=112.8605;InbreedingCoeff=0.9966;MQ=76.20;MQ0=0;MQRankSum=-13.894;QD=37.76;ReadPosRankSum=-1.639;VQSLOD=2.9176;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,2765	1/1:0,11:11:27.09:502,27,0	0/0:14,0:14:42.14:0,42,1024	0/0:23,0:23:69.22:0,69,1587	0/0:12,0:12:36.12:0,36,885	0/0:21,0:21:63.17:0,63,1449	0/0:28,0:28:84.29:0,84,2047	1/1:0,17:17:45.12:747,45,0	0/0:29,0:29:87.30:0,87,2145	0/0:17,0:17:51.18:0,51,1229	0/0:13,0:13:38.34:0,38,895	1/1:0,16:16:39.13:726,39,0	0/0:31,0:31:93.32:0,93,2198	0/0:32,0:32:93.32:0,93,2293	0/0:32,0:32:96.33:0,96,2354	0/0:25,0:25:75.26:0,75,1849	0/0:36,0:36:99:0,108,2576	0/0:29,0:29:87.30:0,87,2136	1/1:0,16:16:48.12:803,48,0	1/1:0,9:9:14.84:101,15,0	1/1:0,36:36:65.79:869,66,0	0/0:10,0:10:30.10:0,30,703	0/0:12,0:12:36.12:0,36,868	0/0:30,0:30:90.27:0,90,2106	0/0:14,0:14:42.10:0,42,960	0/0:17,0:17:48.16:0,48,1126	1/1:0,17:17:48.13:858,48,0	0/0:15,0:15:45.15:0,45,1074
chr10	108124813	.	G	GC	9610.07	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-14.410;DP=788;FS=4.333;HRun=2;HaplotypeScore=74.4291;InbreedingCoeff=0.9992;MQ=78.58;MQ0=0;MQRankSum=-5.811;QD=43.68;ReadPosRankSum=-0.619;VQSLOD=3.9372;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,1855	1/1:1,9:10:24.08:383,24,0	0/0:21,0:21:46.60:0,47,801	0/0:21,0:21:45.53:0,46,724	0/0:19,0:19:54.17:0,54,736	0/0:17,0:17:48.13:0,48,634	0/0:27,0:27:78.23:0,78,1065	1/1:1,27:28:81.25:1243,81,0	0/0:29,0:29:84.25:0,84,1139	0/0:41,0:41:99:0,123,1689	0/0:19,0:19:57.17:0,57,765	1/1:0,42:42:99:1908,120,0	0/0:25,0:25:75.23:0,75,1023	0/0:32,0:32:93.31:0,93,1295	0/0:38,0:38:99:0,114,1574	0/0:31,0:31:93.31:0,93,1299	0/0:40,0:40:99:0,120,1657	0/0:20,0:20:60.20:0,60,839	1/1:0,27:26:78.24:1189,78,0	1/1:0,20:20:57.19:911,57,0	1/1:2,60:62:99:2541,159,0	0/0:22,0:22:63.21:0,63,869	0/0:10,0:10:27.09:0,27,377	0/0:45,0:45:99:0,135,1844	0/0:23,0:23:66.20:0,66,889	0/0:34,0:34:99:0,99,1365	1/1:0,31:31:90.31:1435,90,0	0/0:9,0:9:27.06:0,27,356
chr10	108124897	.	G	GCA	6738.66	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-9.472;DP=910;FS=1.991;HRun=0;HaplotypeScore=113.4557;InbreedingCoeff=0.9954;MQ=68.06;MQ0=21;MQRankSum=0.431;QD=33.53;ReadPosRankSum=-2.166;VQSLOD=6.5188;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:87.25:0,87,1063	1/1:5,8:12:26.76:403,27,0	0/0:73,0:26:38.59:0,39,369	0/0:81,0:31:53.18:0,53,511	0/0:24,0:24:26.19:0,26,603	0/0:21,0:21:57.17:0,57,694	0/0:36,0:36:81.25:0,81,1003	1/1:11,21:32:63.19:974,63,0	0/0:37,0:37:90.22:0,90,1064	0/0:37,0:37:96.30:0,96,1178	0/0:15,0:15:36.11:0,36,446	0/0:44,0:44:95.85:0,96,1187	0/0:22,0:22:63.20:0,63,778	0/0:25,0:25:63.18:0,63,768	0/0:32,0:32:78.24:0,78,966	0/0:33,0:33:93.29:0,93,1152	0/0:29,0:31:77.91:0,78,920	0/0:28,0:28:72.18:0,72,874	1/1:8,11:20:44.02:706,44,0	1/1:8,20:27:35.51:1074,36,0	1/1:38,51:89:99:2960,115,0	0/0:21,0:21:48.14:0,48,577	0/0:6,0:7:20.90:0,21,236	0/0:39,0:40:99:0,111,1332	0/0:17,0:19:47.97:0,48,557	0/0:38,0:38:96.30:0,96,1188	1/1:8,10:18:39.12:622,39,0	0/0:5,0:5:15.05:0,15,186
chr10	108124978	.	ACC	A	6857.55	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=18.396;DP=902;FS=2.088;HRun=7;HaplotypeScore=148.2398;InbreedingCoeff=0.9998;MQ=63.79;MQ0=3;MQRankSum=-1.595;QD=24.85;ReadPosRankSum=-0.592;VQSLOD=2.8155;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,123,1792	1/1:4,5:12:29.28:288,29,0	0/0:48,0:34:52.35:0,52,790	0/0:46,0:31:54.93:0,55,646	0/0:15,0:15:45.10:0,45,695	0/0:22,0:22:60.15:0,60,1021	0/0:37,0:37:93.25:0,93,1459	1/1:2,41:43:99:1329,117,0	0/0:29,0:29:78.12:0,78,1295	0/0:40,0:40:99:0,99,1590	0/0:20,0:20:57.67:0,58,982	1/1:6,44:51:58.51:984,59,0	0/0:25,0:25:69.17:0,69,1053	0/0:37,0:37:99:0,105,1666	0/0:33,0:33:72.64:0,73,1471	0/0:23,0:23:63.19:0,63,1020	0/0:28,0:28:75.23:0,75,1253	0/0:30,0:30:81.21:0,81,1259	1/1:11,18:28:68.97:821,69,0	1/1:17,12:29:57.89:616,58,0	1/1:40,52:94:99:2330,206,0	0/0:13,0:13:33.10:0,33,549	0/0:17,0:17:42.09:0,42,674	0/0:42,0:42:99:0,109,1729	0/0:29,0:29:75.24:0,75,1241	0/0:33,0:33:93.01:0,93,1465	1/1:6,11:17:42.07:490,42,0	0/0:13,0:13:36.11:0,36,602
chr10	108125382	.	G	GT	2283.87	PASS	AB=0.790;AC=14;AF=0.250;AN=56;BaseQRankSum=1.582;DP=627;FS=5.030;HRun=12;HaplotypeScore=77.2682;InbreedingCoeff=0.7325;MQ=66.86;MQ0=1;MQRankSum=-1.840;QD=12.41;ReadPosRankSum=-4.163;VQSLOD=2.4939;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,3:40:42.79:0,43,628	1/1:4,5:9:21:195,21,0	0/0:20,0:16:20.60:0,21,172	0/1:12,0:11:2.48:2,0,70	0/0:28,0:28:68.53:0,69,498	0/0:17,0:18:40.78:0,41,288	0/1:19,3:23:5.60:6,0,281	1/1:25,13:38:44.17:576,44,0	0/0:19,0:20:40.77:0,41,288	0/0:33,0:33:74.52:0,75,546	0/0:15,0:16:25.72:0,26,272	1/1:12,15:27:21.07:488,21,0	0/0:19,0:19:53.30:0,53,382	0/0:20,0:22:57.68:0,58,390	0/0:23,0:24:58.58:0,59,411	0/0:12,0:12:26.81:0,27,197	0/0:25,0:25:55.10:0,55,413	0/0:25,1:28:44.75:0,45,467	1/1:8,11:19:38.55:356,39,0	0/1:6,9:15:1.81:272,0,2	1/1:10,4:14:21.02:199,21,0	0/0:23,3:26:30.39:0,30,379	0/0:22,0:24:35.95:0,36,387	0/0:25,0:25:28.27:0,28,365	0/0:17,0:18:31.77:0,32,222	0/0:28,0:30:63.67:0,64,447	0/1:12,14:26:4.79:372,0,5	0/0:14,0:14:32.54:0,33,226
chr10	108125414	.	AT	A	2344.44	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.715;DP=533;FS=15.138;HRun=10;HaplotypeScore=73.6855;InbreedingCoeff=0.9922;MQ=75.58;MQ0=0;MQRankSum=-1.992;QD=18.46;ReadPosRankSum=-1.456;VQSLOD=2.4808;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:36:99:0,105,1099	1/1:0,10:10:26.72:234,27,0	0/0:14,0:11:11.89:0,12,179	0/0:15,0:15:32.82:0,33,340	0/0:20,0:21:53.97:0,54,571	0/0:16,0:16:42.11:0,42,464	0/0:21,0:21:51.14:0,51,564	1/1:5,25:30:71.95:621,72,0	0/0:11,0:11:27.05:0,27,283	0/0:15,0:16:26.86:0,27,266	0/0:19,0:19:48.12:0,48,523	1/1:2,14:16:35.97:312,36,0	0/0:14,0:14:39.08:0,39,414	0/0:19,0:19:49.91:0,50,522	0/0:15,0:16:38.91:0,39,390	0/0:10,0:10:27.06:0,27,289	0/0:28,0:28:66.16:0,66,721	0/0:24,1:27:48.79:0,49,715	1/1:3,7:10:20.96:178,21,0	1/1:4,17:21:41.95:364,42,0	1/1:1,11:12:29.98:260,30,0	0/0:20,0:20:28.21:0,28,521	0/0:20,0:20:51.14:0,51,562	0/0:30,0:30:78.65:0,79,844	0/0:20,0:20:51.13:0,51,557	0/0:22,0:22:52.66:0,53,545	1/1:3,25:28:65.96:573,66,0	0/0:11,0:11:30.08:0,30,332
chr10	108125977	.	C	CCT	10100	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-7.889;DP=754;FS=5.278;HRun=0;HaplotypeScore=89.6538;InbreedingCoeff=0.9954;MQ=84.34;MQ0=0;MQRankSum=-1.669;QD=51.79;ReadPosRankSum=-1.459;VQSLOD=4.9793;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,2180	1/1:1,4:6:15.05:285,15,0	0/0:31,0:31:78.26:0,78,1163	0/0:17,0:17:48.07:0,48,652	0/0:16,0:16:48.16:0,48,735	0/0:25,0:25:75.25:0,75,1149	0/0:21,0:21:63.21:0,63,965	1/1:3,38:42:99:2400,126,0	0/0:33,0:33:99:0,99,1516	0/0:39,0:39:99:0,117,1787	0/0:16,0:16:42.14:0,42,642	1/1:2,40:43:99:2394,126,0	0/0:20,0:20:57.19:0,57,873	0/0:27,0:27:81.26:0,81,1219	0/0:38,0:38:99:0,114,1720	0/0:26,0:26:72.21:0,72,1040	0/0:41,0:41:99:0,117,1788	0/0:28,0:28:84.27:0,84,1264	1/1:3,17:20:57.19:1065,57,0	1/1:1,9:11:27.09:502,27,0	1/1:4,43:48:99:2182,114,0	0/0:19,0:19:51.17:0,51,780	0/0:13,0:13:39.12:0,39,576	0/0:36,0:36:99:0,105,1604	0/0:28,0:28:81.28:0,81,1240	0/0:28,0:28:81.28:0,81,1239	1/1:0,24:25:66.23:1273,66,0	0/0:7,0:7:18.06:0,18,276
chr10	108126943	.	T	TG	854.48	PASS	AB=0.591;AC=11;AF=0.196;AN=56;BaseQRankSum=-3.918;DP=418;FS=2.459;HRun=9;HaplotypeScore=55.2004;InbreedingCoeff=0.7991;MQ=77.89;MQ0=0;MQRankSum=-0.170;QD=12.03;ReadPosRankSum=-2.696;VQSLOD=2.3551;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:26.93:0,27,225	1/1:2,1:3:0.47:1,0,0	0/0:17,0:18:28.82:0,29,214	0/0:9,0:9:7.09:0,7,75	0/0:7,0:7:11.97:0,12,104	0/0:6,0:6:14.99:0,15,130	0/0:36,0:36:84.40:0,84,727	1/1:7,8:15:21.05:224,21,0	0/0:13,0:13:26.97:0,27,229	0/0:13,0:13:29.98:0,30,258	0/0:5,0:5:5.98:0,6,52	0/0:21,0:21:44.92:0,45,380	0/0:19,0:19:44.94:0,45,384	0/0:15,0:15:29.98:0,30,260	0/0:21,0:21:41.55:0,42,364	0/0:21,0:21:56.96:0,57,490	0/0:34,0:34:57.99:0,58,540	0/0:25,2:27:26.75:0,27,457	1/1:2,9:11:23.79:256,24,0	1/1:0,4:4:9.02:100,9,0	1/1:9,16:25:21.05:224,21,0	0/0:7,0:7:9:0,9,78	0/0:6,0:6:11.99:0,12,104	0/0:21,0:21:41.94:0,42,364	0/0:5,0:5:11.97:0,12,101	0/0:16,0:16:23.92:0,24,207	0/1:4,9:13:1.99:208,0,2	0/0:11,0:11:24:0,24,208
chr10	108127587	.	CCA	C	668.88	PASS	AB=0.954;AC=23;AF=0.460;AN=50;BaseQRankSum=3.037;DP=640;FS=17.116;HRun=0;HaplotypeScore=96.9823;InbreedingCoeff=-0.5070;MQ=56.52;MQ0=28;MQRankSum=-0.505;QD=1.36;ReadPosRankSum=-1.221;VQSLOD=0.7224;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:29:51.68:52,0,218	1/1:2,0:4:5.50:25,5,0	./.	./.	./.	0/1:16,1:15:23.92:24,0,81	0/1:32,1:31:95.28:95,0,239	1/1:22,0:14:2.51:7,3,0	0/1:36,2:36:89.51:90,0,277	0/0:17,0:17:4.78:0,5,25	0/0:12,0:11:3.01:0,3,30	0/1:27,2:31:34.09:34,0,184	0/1:26,1:26:40.19:40,0,192	0/1:19,1:18:53.85:54,0,73	0/1:23,1:21:41.31:41,0,115	0/0:30,0:29:2.62:0,3,320	0/1:18,1:18:55.85:56,0,169	0/1:22,1:24:88.95:89,0,374	0/0:11,0:11:2.92:0,3,17	1/1:10,0:9:2.22:7,2,0	0/1:83,0:73:2.68:53,0,3	0/1:12,1:12:26.91:27,0,35	0/1:11,0:10:15.87:26,0,16	0/1:37,1:37:21.55:22,0,327	0/1:13,1:13:13.25:44,0,13	0/0:16,0:13:0.73:0,1,120	0/1:14,0:12:2.44:2,0,22	0/1:8,1:9:15.37:15,0,197
chr10	108127651	.	AAC	A	241.79	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.358;DP=1053;FS=3.165;HRun=0;HaplotypeScore=176.0266;InbreedingCoeff=0.4550;MQ=37.78;MQ0=122;MQRankSum=-5.169;QD=6.91;ReadPosRankSum=-0.660;VQSLOD=2.9803;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:36:69.50:0,69,1210	0/0:4,1:5:3.78:0,4,88	0/0:74,1:3:3.01:0,3,49	0/0:65,0:4:8.99:0,9,108	0/0:17,0:16:19.83:0,20,250	0/0:24,0:20:45.14:0,45,698	0/0:46,0:39:76.43:0,76,1268	0/0:113,2:80:62.34:0,62,2110	0/0:32,0:25:57.18:0,57,901	0/0:30,0:24:54.42:0,54,853	0/0:13,0:11:17.97:0,18,265	1/1:28,7:28:4.44:320,4,0	0/0:26,0:22:42.92:0,43,751	0/0:29,1:23:19.07:0,19,796	0/0:29,1:24:48.76:0,49,904	0/0:23,0:18:33.10:0,33,523	0/0:29,0:27:48.17:0,48,1010	0/0:25,0:24:51.17:0,51,814	0/0:25,0:9:15.94:0,16,240	0/0:16,0:11:21.78:0,22,327	0/0:148,1:123:68.87:0,69,1065	0/0:25,0:24:54.17:0,54,808	0/0:16,0:15:30.06:0,30,449	0/0:49,0:46:89.69:0,90,1504	0/0:25,1:22:1.26:0,1,554	0/0:42,0:28:56.39:0,56,857	0/0:15,0:14:12.56:0,13,259	0/0:12,0:8:21.07:0,21,341
chr10	108127708	.	C	CCA	713.69	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=6.189;DP=909;FS=0.671;HRun=0;HaplotypeScore=161.3526;InbreedingCoeff=0.5582;MQ=52.98;MQ0=50;MQRankSum=-3.932;QD=13.47;ReadPosRankSum=-0.769;VQSLOD=3.3516;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:29:60.08:0,60,677	0/0:5,0:4:6.02:0,6,74	0/0:62,0:10:20.87:0,21,166	0/0:67,0:16:11.73:0,12,187	0/0:9,0:8:15.52:0,16,181	0/0:17,0:16:33.10:0,33,401	0/0:53,0:54:99:0,115,1437	0/0:66,0:54:71.48:0,71,968	0/0:28,0:27:54.61:0,55,634	0/0:22,0:18:38.95:0,39,456	0/0:10,0:9:14.88:0,15,183	1/1:18,12:30:59:807,59,0	0/1:19,0:20:5.53:6,0,413	0/0:27,0:25:54.16:0,54,649	0/0:24,0:24:57.15:0,57,675	0/0:18,0:18:41.62:0,42,488	0/0:30,0:30:57.98:0,58,873	0/0:34,0:33:34.56:0,35,830	0/0:29,0:19:17.88:0,18,186	0/0:14,0:13:21.95:0,22,260	0/0:162,0:150:99:0,173,2141	0/0:17,0:17:30.09:0,30,361	0/0:11,0:11:5.85:0,6,51	0/0:49,1:51:72.83:0,73,1230	0/0:17,0:17:24.07:0,24,295	0/0:21,0:17:29.60:0,30,366	0/0:12,0:12:11.25:0,11,212	0/0:11,0:11:30.09:0,30,367
chr10	108127743	.	G	GAC	3735.45	PASS	AB=0.954;AC=13;AF=0.232;AN=56;BaseQRankSum=-3.508;DP=907;FS=12.316;HRun=0;HaplotypeScore=137.6004;InbreedingCoeff=0.6517;MQ=48.61;MQ0=44;MQRankSum=-0.043;QD=10.21;ReadPosRankSum=1.337;VQSLOD=2.8035;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:84.21:0,84,1009	1/1:4,0:4:6:53,6,0	0/0:67,1:12:13.86:0,14,118	0/1:74,0:10:20.16:20,0,49	0/0:14,0:14:12.33:0,12,121	0/0:14,0:15:8.76:0,9,279	0/0:49,0:50:80.62:0,81,1021	0/1:50,6:44:86.13:426,0,86	0/0:28,0:26:57.24:0,57,705	0/0:31,0:29:65.86:0,66,769	0/0:12,0:12:15.05:0,15,186	1/1:11,17:26:32.81:549,33,0	0/0:16,0:16:32.94:0,33,385	0/0:29,0:27:66.62:0,67,785	0/0:18,0:17:41.79:0,42,470	0/0:22,0:20:37.81:0,38,437	0/0:23,0:23:49.66:0,50,623	0/0:42,0:42:85.29:0,85,1156	0/1:22,1:5:20.28:42,0,20	1/1:5,7:12:14.35:229,14,0	1/1:65,91:138:23.97:2136,24,0	0/0:18,0:17:38.95:0,39,447	0/0:17,0:17:29.75:0,30,311	0/0:48,0:49:96.64:0,97,1129	0/0:14,0:14:27.08:0,27,327	0/0:21,0:22:59.93:0,60,656	1/1:8,4:11:21.03:281,21,0	0/0:13,0:14:35.89:0,36,391
chr10	108127828	.	C	CCA	1408.59	PASS	AB=0.818;AC=7;AF=0.140;AN=50;BaseQRankSum=0.862;DP=833;FS=15.128;HRun=0;HaplotypeScore=114.6705;InbreedingCoeff=0.4492;MQ=40.70;MQ0=156;MQRankSum=-4.986;QD=6.52;ReadPosRankSum=-2.840;VQSLOD=1.4502;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:22:29.92:0,30,355	./.	./.	./.	0/0:17,0:11:8.80:0,9,112	0/0:26,0:20:37.56:0,38,414	0/0:56,0:46:64.38:0,64,795	0/1:36,8:25:38.39:448,0,38	0/0:20,0:16:27.08:0,27,325	0/0:43,0:23:44.87:0,45,525	0/0:9,0:8:12.04:0,12,144	0/1:17,7:18:2.25:320,0,2	0/0:22,0:16:31.28:0,31,377	0/0:27,0:20:26.65:0,27,337	0/0:22,0:14:30.09:0,30,369	0/0:18,0:15:27.08:0,27,335	0/0:29,0:23:62.41:0,62,757	0/0:33,0:26:51.16:0,51,634	0/0:29,1:11:3.01:0,3,32	1/1:7,2:6:12.04:156,12,0	0/1:106,13:98:99:561,0,142	0/0:22,0:17:27.08:0,27,330	0/0:17,0:14:21.06:0,21,252	0/0:52,0:47:76.05:0,76,1039	0/0:25,0:19:33.06:0,33,385	0/0:35,0:21:35.53:0,36,384	1/1:10,2:8:3.48:50,3,0	0/0:20,0:16:26.92:0,27,313
chr10	108127859	.	CCA	C	53.01	PASS	AB=0.967;AC=8;AF=0.154;AN=52;BaseQRankSum=2.723;DP=735;FS=2.498;HRun=0;HaplotypeScore=95.2742;InbreedingCoeff=-0.0886;MQ=34.84;MQ0=171;MQRankSum=0.402;QD=0.26;ReadPosRankSum=-0.004;VQSLOD=1.4281;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:19:9.03:0,9,137	0/0:7,0:2:1.25:0,1,3	./.	0/0:9,0:2:6.02:0,6,73	0/0:16,0:12:2.40:0,2,36	0/1:28,1:18:44.29:44,0,77	0/1:47,1:40:28.05:28,0,454	0/0:38,0:14:15.90:0,16,160	0/0:23,0:16:11.33:0,11,89	0/0:40,0:18:1.37:0,1,159	0/0:8,0:6:3.01:0,3,36	0/1:23,0:14:25.41:27,0,25	0/1:19,1:11:21.47:21,0,114	0/0:25,0:17:18.05:0,18,234	0/0:30,0:21:21.07:0,21,283	0/1:20,0:15:5.12:5,0,81	0/0:35,0:26:18.35:0,18,515	0/1:35,2:29:14.76:15,0,549	1/1:25,0:9:1.58:31,2,0	0/0:7,0:5:2.94:0,3,18	0/0:89,0:69:14.29:0,14,113	0/0:25,0:18:6.02:0,6,91	0/0:14,0:11:3.01:0,3,46	0/0:51,0:44:20.84:0,21,706	0/0:24,0:18:6.02:0,6,76	0/0:28,0:15:5.05:0,5,44	./.	0/0:12,0:10:6.02:0,6,82
chr10	108128143	.	TACC	T	121.21	PASS	AB=0.840;AC=6;AF=0.120;AN=50;BaseQRankSum=1.655;DP=669;FS=13.636;HRun=0;HaplotypeScore=57.3823;InbreedingCoeff=0.3757;MQ=25.06;MQ0=275;MQRankSum=-2.589;QD=2.38;ReadPosRankSum=-0.041;VQSLOD=-0.4432;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:13:20.53:0,21,414	0/0:4,2:2:0:0,0,0	./.	./.	./.	0/0:19,0:9:6.87:0,7,86	0/0:47,0:25:29.90:0,30,388	1/1:19,2:4:3.01:40,3,0	0/0:26,0:21:21.07:0,21,436	0/0:26,0:10:21.07:0,21,406	0/0:10,0:8:3.48:0,3,63	0/0:46,0:18:5.80:0,6,99	0/0:17,0:13:30.03:0,30,520	0/0:31,0:18:27.04:0,27,439	0/0:22,0:17:15.03:0,15,262	0/0:26,0:16:21.03:0,21,392	0/0:32,0:19:29.47:0,29,524	0/0:14,0:5:12.04:0,12,250	0/1:12,3:6:7.91:113,0,8	0/1:9,2:9:33.23:33,0,44	0/0:60,5:11:0:0,0,0	0/0:12,0:4:6.02:0,6,113	0/0:7,0:3:6.02:0,6,125	0/0:49,0:29:51.06:0,51,938	0/0:21,0:9:17.80:0,18,311	0/0:32,0:11:22.58:0,23,373	1/1:3,1:1:3.01:44,3,0	0/0:11,0:8:12:0,12,199
chr10	108128277	.	TCAC	T	411.15	PASS	AB=0.667;AC=11;AF=0.212;AN=52;BaseQRankSum=4.455;DP=648;FS=3.880;HRun=0;HaplotypeScore=47.8177;InbreedingCoeff=0.5579;MQ=23.82;MQ0=251;MQRankSum=-1.470;QD=2.19;ReadPosRankSum=0.790;VQSLOD=1.0036;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:10:3.01:0,3,63	1/1:4,4:8:2.96:20,3,0	./.	./.	0/0:12,0:12:6.02:0,6,111	0/0:12,0:4:6.02:0,6,126	0/0:53,0:25:6.01:0,6,101	0/0:12,1:2:5.93:0,6,41	0/0:20,0:9:12.04:0,12,251	0/0:25,0:14:36.12:0,36,754	0/0:6,0:6:6.02:0,6,126	1/1:44,17:15:21.02:278,21,0	0/0:17,0:11:9.03:0,9,162	0/0:26,0:5:9.03:0,9,188	0/0:19,0:12:5.97:0,6,82	0/0:31,0:21:17.73:0,18,375	0/0:26,0:12:12.04:0,12,232	0/0:17,0:11:0.82:0,1,44	1/1:10,2:2:6.01:72,6,0	1/1:4,5:5:6.02:90,6,0	1/1:46,40:17:6.02:90,6,0	0/0:14,0:13:15.03:0,15,275	0/0:8,0:7:6.02:0,6,126	0/0:42,0:24:24.03:0,24,427	0/0:24,0:14:9.03:0,9,188	0/0:30,0:7:15.05:0,15,308	0/1:6,6:8:0.01:0,0,0	0/0:8,0:5:3.01:0,3,63
chr10	108128319	.	TCAC	T	30.22	PASS	AB=0.993;AC=5;AF=0.096;AN=52;BaseQRankSum=3.562;DP=774;FS=7.129;HRun=0;HaplotypeScore=89.9197;InbreedingCoeff=0.2127;MQ=30.40;MQ0=265;MQRankSum=-2.829;QD=0.24;ReadPosRankSum=-0.803;VQSLOD=0.5977;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:13:27.09:0,27,483	0/0:14,0:9:3.01:0,3,35	./.	./.	0/0:9,0:9:9.03:0,9,173	0/0:15,0:6:12.04:0,12,193	0/0:62,0:40:66.03:0,66,966	1/1:48,3:7:9.03:109,9,0	0/0:33,0:26:46.49:0,46,830	0/0:32,0:17:47.63:0,48,742	0/1:9,0:7:2.18:2,0,105	0/1:48,1:22:9.40:9,0,121	0/0:18,0:12:24.04:0,24,397	0/0:26,0:20:21.07:0,21,519	0/0:21,0:15:26.44:0,26,433	0/0:36,0:29:23.54:0,24,714	0/0:32,0:19:39.55:0,40,643	0/0:19,0:14:19.90:0,20,319	0/0:20,0:4:7.87:0,8,99	0/0:14,1:11:4.04:0,4,175	0/0:118,0:41:3.40:0,3,98	0/0:13,0:9:15.05:0,15,251	0/0:10,0:7:8.98:0,9,124	0/0:51,0:34:51.09:0,51,896	0/0:18,0:10:12.01:0,12,174	0/0:30,0:16:18.82:0,19,549	0/1:17,0:13:8.76:9,0,71	0/0:5,0:4:8.96:0,9,115
chr10	108129234	.	G	GA	6166.15	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.280;DP=656;FS=12.656;HRun=3;HaplotypeScore=83.4322;InbreedingCoeff=0.9980;MQ=81.46;MQ0=0;MQRankSum=-3.839;QD=40.57;ReadPosRankSum=-2.182;VQSLOD=2.5783;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,138,1760	1/1:1,6:7:18.04:248,18,0	0/0:15,0:15:38.85:0,39,458	0/0:22,0:22:57.13:0,57,662	0/0:14,0:14:36.12:0,36,467	0/0:17,0:17:48.16:0,48,623	0/0:26,0:26:72.23:0,72,930	1/1:1,25:26:75.21:1096,75,0	0/0:25,0:25:66.21:0,66,857	0/0:28,0:28:84.27:0,84,1091	0/0:11,0:11:30.10:0,30,390	1/1:1,30:31:84.24:1195,84,0	0/0:22,0:22:66.21:0,66,853	0/0:33,0:33:93.28:0,93,1190	0/0:35,0:35:99:0,105,1363	0/0:19,0:19:54.18:0,54,701	0/0:39,0:39:99:0,114,1450	0/0:34,0:34:99:0,99,1263	1/1:3,17:20:57.19:839,57,0	1/1:0,8:8:24.08:360,24,0	1/1:0,43:43:99:1744,117,0	0/0:19,0:19:54.18:0,54,701	0/0:11,0:11:33.09:0,33,414	0/0:30,0:30:90.25:0,90,1136	0/0:16,0:16:48.16:0,48,623	0/0:23,0:23:66.21:0,66,845	1/1:0,17:17:48.13:685,48,0	0/0:16,0:16:45.12:0,45,554
chr10	108131224	.	AAAG	A	815.04	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=9.540;DP=429;FS=2.241;HRun=0;HaplotypeScore=64.8085;InbreedingCoeff=0.8173;MQ=46.88;MQ0=19;MQRankSum=-4.115;QD=8.96;ReadPosRankSum=-3.310;VQSLOD=2.1219;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:61.60:0,62,1039	1/1:5,0:5:3:28,3,0	./.	0/0:21,0:2:1.82:0,2,5	0/0:25,0:25:46.62:0,47,844	0/0:10,0:10:27.04:0,27,401	0/0:14,0:14:35.95:0,36,478	1/1:11,1:11:14.75:95,15,0	0/0:9,0:9:23.89:0,24,333	0/0:13,0:11:33.08:0,33,541	0/0:23,0:23:53.04:0,53,788	1/1:12,1:14:21.54:224,22,0	0/0:10,0:9:23.96:0,24,337	0/0:9,0:9:23.29:0,23,366	0/0:15,0:12:18.04:0,18,365	0/0:9,0:9:20.94:0,21,305	0/0:24,0:21:44.24:0,44,748	0/0:35,0:33:71.09:0,71,995	1/1:14,1:13:34.50:270,35,0	1/1:14,0:14:35.64:282,36,0	1/1:9,0:8:2.92:17,3,0	0/0:6,0:6:12.02:0,12,220	0/0:19,0:18:32.48:0,32,464	0/0:18,0:16:38.31:0,38,579	0/0:17,0:17:32.17:0,32,651	0/0:10,0:9:23.31:0,23,273	1/1:13,1:13:11.68:74,12,0	0/1:8,0:6:4.57:5,0,145
chr10	108131225	.	AAG	A	907.38	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=9.393;DP=426;FS=4.235;HRun=0;HaplotypeScore=58.3718;InbreedingCoeff=0.8700;MQ=46.74;MQ0=20;MQRankSum=-4.340;QD=8.56;ReadPosRankSum=-3.824;VQSLOD=2.2427;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:44.39:0,44,760	1/1:0,5:5:3:25,3,0	./.	0/1:23,0:3:0.72:1,0,1	0/0:24,0:24:45.95:0,46,664	0/0:10,0:10:27.03:0,27,325	0/0:14,0:14:35.29:0,35,364	1/1:8,3:10:14.57:107,15,0	0/0:9,0:9:21.55:0,22,250	0/0:13,0:11:33.07:0,33,440	0/0:23,0:23:52.88:0,53,628	1/1:12,3:15:22.19:239,22,0	0/0:10,0:9:23.72:0,24,260	0/0:9,0:9:23.44:0,23,288	0/0:15,0:12:17.94:0,18,303	0/0:9,0:9:19.48:0,19,226	0/0:24,0:21:44.01:0,44,590	0/0:35,0:33:74.96:0,75,777	1/1:13,2:13:37.85:296,38,0	1/1:12,2:14:35.88:297,36,0	1/1:2,7:8:2.92:17,3,0	0/0:5,0:5:12.04:0,12,172	0/0:19,0:18:31.41:0,31,353	0/0:18,0:16:38.06:0,38,443	0/0:17,0:17:31.01:0,31,500	0/0:10,0:9:22.33:0,22,204	1/1:3,11:13:11.58:105,12,0	0/0:7,0:5:9.49:0,9,119
chr10	108131751	.	G	GAGGGGGA	167.16	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.353;DP=282;FS=0.000;HRun=0;HaplotypeScore=72.4299;InbreedingCoeff=0.5616;MQ=85.23;MQ0=0;MQRankSum=-0.136;QD=23.88;ReadPosRankSum=-0.045;VQSLOD=2.9174;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.20:0,75,1725	0/0:2,0:2:6.02:0,6,154	0/0:19,0:15:5.84:0,6,427	0/0:20,0:18:34.41:0,34,554	0/0:12,0:12:24.05:0,24,513	0/0:12,0:12:36.11:0,36,923	0/0:16,0:16:48.16:0,48,1171	0/0:16,0:16:45.12:0,45,759	0/0:17,0:17:51.16:0,51,1319	0/0:7,0:7:21.04:0,21,457	0/0:3,0:3:7.27:0,7,138	1/1:0,5:6:6.02:247,6,0	0/0:6,0:6:15.04:0,15,301	0/0:13,0:13:39.13:0,39,1005	0/0:15,0:15:42.11:0,42,891	0/0:8,0:8:24.07:0,24,555	0/0:18,0:18:48.13:0,48,1164	0/0:11,0:11:27.09:0,27,653	0/0:4,0:4:9.02:0,9,142	1/1:1,0:1:0.47:1,0,0	0/0:5,0:5:15.03:0,15,246	0/0:9,0:9:27.09:0,27,642	0/0:6,0:6:12.04:0,12,295	0/0:9,0:9:24.07:0,24,564	0/0:7,0:7:21.07:0,21,578	0/0:6,0:6:18.06:0,18,489	0/0:5,0:5:15.04:0,15,286	0/0:3,0:3:6.02:0,6,123
chr10	108141757	.	A	AG	8172.97	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-10.235;DP=625;FS=3.805;HRun=1;HaplotypeScore=63.9372;InbreedingCoeff=0.9950;MQ=71.76;MQ0=0;MQRankSum=0.849;QD=42.79;ReadPosRankSum=-0.764;VQSLOD=4.7874;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1465	1/1:0,9:9:24.08:384,24,0	0/0:11,0:11:33.09:0,33,432	0/0:6,0:6:15.04:0,15,191	0/0:19,0:19:57.18:0,57,780	0/0:15,0:15:42.13:0,42,570	0/0:27,0:27:78.23:0,78,1050	1/1:0,30:30:90.29:1415,90,0	0/0:20,0:21:60.20:0,60,839	0/0:23,0:23:60.19:0,60,823	0/0:9,0:9:21.07:0,21,294	1/1:2,37:39:99:1581,99,0	0/0:20,0:20:60.16:0,60,817	0/0:27,0:27:81.27:0,81,1131	0/0:25,0:25:75.25:0,75,1045	0/0:19,0:19:57.18:0,57,780	0/0:41,0:41:99:0,123,1719	0/0:25,0:25:72.24:0,72,1005	1/1:1,20:21:60.19:928,60,0	1/1:1,9:10:27.09:418,27,0	1/1:0,64:64:99:2777,175,0	0/0:18,0:18:54.18:0,54,753	0/0:14,0:14:42.14:0,42,585	0/0:34,0:34:99:0,102,1426	0/0:16,0:16:48.16:0,48,670	0/0:21,0:21:63.20:0,63,865	1/1:0,18:18:42.14:671,42,0	0/0:7,0:7:21.07:0,21,294
chr10	108142423	.	CA	C	1000.93	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=13.537;DP=540;FS=10.911;HRun=10;HaplotypeScore=69.4414;InbreedingCoeff=0.8343;MQ=72.38;MQ0=0;MQRankSum=-0.682;QD=8.07;ReadPosRankSum=0.306;VQSLOD=0.9326;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:37:67.13:0,67,923	1/1:7,0:7:17.39:94,17,0	0/0:17,1:18:7.07:0,7,302	0/0:12,0:12:21.51:0,22,214	0/0:14,0:14:36.08:0,36,387	0/0:10,0:10:21.04:0,21,218	0/0:27,1:28:46.14:0,46,737	1/1:21,0:21:13.42:150,13,0	0/0:21,0:21:57.15:0,57,623	0/0:23,0:24:66.01:0,66,706	0/0:11,0:11:21.06:0,21,232	1/1:17,0:17:43.38:240,43,0	0/0:16,0:16:42.09:0,42,449	0/0:23,0:23:69.15:0,69,740	0/0:10,1:11:27.07:0,27,299	0/0:14,0:14:39.11:0,39,431	0/0:39,0:39:99:0,105,1161	0/0:22,0:22:60.16:0,60,664	1/1:21,0:21:4.14:191,4,0	1/1:16,0:16:3.35:95,3,0	1/1:26,0:26:16.40:254,16,0	0/0:10,0:10:21.05:0,21,225	0/0:16,0:16:45.10:0,45,483	0/0:28,0:30:80.86:0,81,840	0/0:13,0:13:36.09:0,36,392	0/0:25,1:26:34.11:0,34,604	0/1:16,0:15:4.94:151,0,5	0/0:21,0:21:48.11:0,48,522
chr10	108142433	.	AT	A	4220.01	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.870;DP=529;FS=0.385;HRun=1;HaplotypeScore=60.3204;InbreedingCoeff=0.9962;MQ=70.16;MQ0=0;MQRankSum=-0.445;QD=33.23;ReadPosRankSum=0.173;VQSLOD=4.3965;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:97.98:0,98,1244	1/1:0,12:12:23.98:287,24,0	0/0:13,0:13:25.30:0,25,357	0/0:10,0:10:24.51:0,25,299	0/0:17,0:17:48.02:0,48,555	0/0:6,0:6:18.06:0,18,234	0/0:27,0:27:74.61:0,75,981	1/1:6,15:21:57.12:700,57,0	0/0:21,0:21:63.17:0,63,824	0/0:22,0:22:66.16:0,66,878	0/0:7,0:7:21.05:0,21,264	1/1:0,17:17:45.15:619,45,0	0/0:15,0:15:42.11:0,42,537	0/0:24,0:24:69.21:0,69,938	0/0:12,0:12:33.08:0,33,426	0/0:14,0:14:42.13:0,42,568	0/0:41,0:41:99:0,123,1559	0/0:25,0:25:74.91:0,75,944	1/1:0,23:23:66.16:829,66,0	1/1:0,13:13:29.99:352,30,0	1/1:7,20:27:75.02:921,75,0	0/0:9,0:9:24.06:0,24,309	0/0:17,0:17:41.93:0,42,555	0/0:29,0:29:87.15:0,87,1097	0/0:16,0:16:45.07:0,45,564	0/0:25,0:25:66.39:0,66,910	1/1:1,13:14:39.04:512,39,0	0/0:15,0:15:45.12:0,45,606
chr10	108142858	.	GCA	G	140.15	PASS	AB=0.950;AC=9;AF=0.188;AN=48;BaseQRankSum=4.938;DP=511;FS=1.957;HRun=0;HaplotypeScore=73.4457;InbreedingCoeff=-0.0832;MQ=59.05;MQ0=7;MQRankSum=0.586;QD=0.81;ReadPosRankSum=1.475;VQSLOD=1.2977;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:0.85:0,1,101	0/0:8,0:8:5.98:0,6,61	./.	./.	0/0:12,1:13:8.63:0,9,133	0/0:10,0:10:3:0,3,25	0/1:25,2:26:35.23:35,0,198	0/0:15,0:15:4.26:0,4,47	0/0:15,0:15:28.58:0,29,334	0/0:16,0:16:9.03:0,9,118	0/0:12,0:10:8.76:0,9,101	0/1:10,0:10:8.11:8,0,39	0/0:13,0:12:12.04:0,12,162	0/0:14,0:14:12.04:0,12,174	1/1:15,4:21:11.69:90,12,0	0/1:16,1:17:14.33:14,0,199	0/1:34,2:37:68.02:68,0,397	0/0:21,0:25:26.75:0,27,409	0/0:14,0:12:9:0,9,78	0/0:7,0:7:3.01:0,3,42	0/1:26,2:28:11.16:11,0,204	0/1:19,0:19:26.33:26,0,38	./.	0/0:40,2:42:9.68:0,10,493	0/1:12,0:12:15.80:16,0,114	0/0:20,0:19:7.24:0,7,55	0/0:16,0:16:13.09:0,13,197	./.
chr10	108144042	.	CG	C	796.39	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=4.640;DP=164;FS=5.021;HRun=8;HaplotypeScore=21.8012;InbreedingCoeff=0.7245;MQ=87.15;MQ0=0;MQRankSum=-1.722;QD=15.32;ReadPosRankSum=1.762;VQSLOD=2.2192;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:18.53:0,19,217	1/1:0,2:2:6.01:58,6,0	0/0:7,0:7:13.80:0,14,116	0/0:10,0:9:17.84:0,18,164	0/0:2,0:2:3.01:0,3,35	0/0:11,0:11:24.07:0,24,285	0/0:8,0:8:21.06:0,21,253	1/1:3,7:10:20.99:193,21,0	0/0:5,0:5:15.03:0,15,168	0/0:2,0:2:6.02:0,6,72	0/0:3,0:3:9.03:0,9,108	1/1:1,6:7:9.39:111,9,0	0/0:4,0:4:12.01:0,12,121	0/0:4,0:4:12.02:0,12,133	0/0:1,0:1:3:0,3,26	0/0:7,0:7:21.05:0,21,242	0/0:8,0:8:21.06:0,21,253	0/0:13,0:13:33.09:0,33,390	1/1:2,3:4:6.01:58,6,0	1/1:0,3:3:9.01:87,9,0	1/1:4,11:15:30.04:289,30,0	0/0:3,0:3:3.01:0,3,36	0/0:1,0:1:3.01:0,3,36	0/0:9,0:9:18.06:0,18,217	./.	0/0:3,0:3:3.01:0,3,36	1/1:3,7:10:18.03:174,18,0	0/0:2,0:2:6:0,6,60
chr10	108144303	.	G	GCC	994.47	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.177;DP=297;FS=2.534;HRun=9;HaplotypeScore=40.1374;InbreedingCoeff=0.7990;MQ=81.26;MQ0=0;MQRankSum=-0.757;QD=15.54;ReadPosRankSum=-4.259;VQSLOD=-0.1468;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:33.04:0,33,343	1/1:1,2:3:3.01:35,3,0	0/0:12,0:12:16.27:0,16,166	0/1:10,0:10:22.95:23,0,32	0/0:9,0:10:29.81:0,30,299	0/0:11,0:11:27.05:0,27,287	0/0:18,0:18:51.13:0,51,542	1/1:4,4:10:9.01:115,9,0	0/0:9,0:9:21.03:0,21,216	0/0:11,0:11:21.03:0,21,223	0/0:6,0:6:18.05:0,18,192	1/1:2,5:7:9.03:138,9,0	0/0:8,0:8:21.02:0,21,215	0/0:21,0:21:54.08:0,54,556	0/0:6,0:6:15.02:0,15,152	0/0:13,0:13:33.07:0,33,351	0/0:30,0:30:78.12:0,78,820	0/0:14,0:14:39.09:0,39,412	1/1:2,4:6:12.04:183,12,0	1/1:0,4:4:8.94:86,9,0	1/1:2,11:14:21.03:293,21,0	0/0:3,0:3:9.02:0,9,96	0/0:6,0:6:15.04:0,15,160	0/0:12,0:12:33.08:0,33,350	0/0:11,0:11:30.06:0,30,319	0/0:9,0:9:24.04:0,24,255	1/1:1,8:10:23.40:305,23,0	0/0:4,0:4:5.99:0,6,64
chr10	108144783	.	GT	G	742.69	PASS	AB=0.821;AC=19;AF=0.339;AN=56;BaseQRankSum=5.246;DP=596;FS=2.757;HRun=16;HaplotypeScore=79.9494;InbreedingCoeff=0.0836;MQ=75.69;MQ0=2;MQRankSum=1.136;QD=2.40;ReadPosRankSum=1.655;VQSLOD=-0.3952;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:18,5:24:8.60:9,0,235	1/1:5,0:12:11.94:34,12,0	0/0:26,1:16:13.17:0,13,75	0/0:14,0:13:2.12:0,2,15	0/1:22,5:30:43.96:44,0,209	0/1:17,6:23:25.97:26,0,218	0/1:15,6:21:58.35:58,0,74	0/1:16,12:29:29.01:131,0,29	0/0:23,2:26:32.73:0,33,364	0/0:29,0:29:38.77:0,39,310	0/0:22,1:24:5.08:0,5,167	0/0:9,0:16:12.64:0,13,79	0/0:15,0:16:21.26:0,21,190	0/1:14,5:20:9.36:9,0,225	0/0:24,2:25:11.90:0,12,310	0/1:15,1:16:0.41:0,0,167	0/1:18,3:21:24.10:24,0,141	0/1:12,3:16:21.26:21,0,149	1/1:6,9:15:26.40:161,26,0	0/1:16,12:31:40.12:146,0,40	1/1:5,10:17:24.54:138,25,0	0/0:16,2:18:14.94:0,15,232	0/0:16,2:19:2.12:0,2,151	0/1:16,0:17:19.79:20,0,92	0/0:23,2:27:26.61:0,27,309	0/0:30,0:30:24.28:0,24,287	1/1:9,7:17:15.80:94,16,0	0/0:12,2:14:10.08:0,10,171
chr10	108145504	.	GTC	G	1467.61	PASS	AB=0.925;AC=33;AF=0.688;AN=48;BaseQRankSum=1.946;DP=612;FS=5.326;HRun=0;HaplotypeScore=97.7353;InbreedingCoeff=0.2653;MQ=69.07;MQ0=15;MQRankSum=-0.069;QD=3.46;ReadPosRankSum=2.741;VQSLOD=1.4313;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:28.49:246,28,0	./.	./.	0/0:44,0:27:0:0,0,1	./.	1/1:18,0:18:9:82,9,0	1/1:25,1:26:6.01:64,6,0	./.	1/1:13,9:21:8.77:96,9,0	0/1:31,0:30:14.73:15,0,80	0/1:19,0:20:19.73:20,0,53	0/0:25,0:25:11:0,11,105	1/1:13,0:13:8.59:90,9,0	1/1:23,0:23:18.01:179,18,0	1/1:25,0:25:23.66:206,24,0	0/0:27,0:27:3.15:0,3,206	1/1:25,0:25:29.83:283,30,0	1/1:10,4:14:3.01:32,3,0	1/1:13,0:13:5.68:28,6,0	0/1:10,0:14:0:0,0,0	0/1:17,0:19:0:0,0,0	0/1:10,0:10:19.55:20,0,34	0/1:12,0:13:0:0,0,0	1/1:23,20:42:3:32,3,0	1/1:15,0:15:5.91:49,6,0	0/1:24,0:24:99:103,0,109	1/1:10,0:17:11.36:56,11,0	0/0:18,0:18:6.02:0,6,84
chr10	108145542	.	CTCTCTCTCTCAT	C	437.39	PASS	AB=0.945;AC=10;AF=0.179;AN=56;BaseQRankSum=5.170;DP=599;FS=1.371;HRun=0;HaplotypeScore=191.2454;InbreedingCoeff=0.0822;MQ=48.64;MQ0=23;MQRankSum=-1.370;QD=3.31;ReadPosRankSum=-2.987;VQSLOD=2.1044;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:53:33.84:0,34,1959	1/1:10,0:9:2.93:18,3,0	0/0:1,0:1:3:0,3,25	0/0:4,0:1:3:0,3,29	0/0:19,0:19:19.27:0,19,383	0/0:18,0:16:21.56:0,22,579	0/0:25,0:24:17.63:0,18,731	0/0:16,0:14:21.89:0,22,347	0/0:25,0:25:29.27:0,29,702	0/0:19,0:18:26.88:0,27,1028	0/0:19,0:18:23.98:0,24,602	0/1:29,0:28:11.54:12,0,497	0/1:15,1:16:1.10:1,0,581	0/1:18,0:18:14.20:14,0,929	0/0:29,0:29:14.63:0,15,1287	0/0:22,0:22:48.46:0,48,1454	0/0:34,0:33:55.11:0,55,1638	0/0:13,0:12:27.02:0,27,421	0/1:7,2:9:77.81:162,0,78	0/0:18,1:16:3.88:0,4,26	1/1:13,0:11:0.47:1,0,0	0/0:25,0:25:39.33:0,39,946	0/0:16,0:14:8.06:0,8,196	0/0:62,0:57:24.69:0,25,1500	0/0:20,0:20:36.70:0,37,809	0/0:27,0:27:79.36:0,79,1877	0/1:17,2:17:92.40:343,0,92	0/1:17,0:16:1.60:2,0,631
chr10	108145548	.	CTCTCAT	C	834.06	PASS	AB=0.988;AC=15;AF=0.300;AN=50;BaseQRankSum=7.080;DP=606;FS=42.520;HRun=0;HaplotypeScore=156.4905;InbreedingCoeff=-0.3009;MQ=48.73;MQ0=22;MQRankSum=1.504;QD=2.56;ReadPosRankSum=-1.331;VQSLOD=1.2238;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:50,0:49:99:202,0,766	./.	./.	./.	0/0:21,0:21:19.27:0,19,316	0/1:19,0:17:51.49:51,0,200	0/0:29,0:28:24.77:0,25,501	0/0:20,0:18:51.55:0,52,438	0/0:27,0:27:24.90:0,25,359	0/0:16,0:15:18.69:0,19,576	0/1:20,0:19:2.99:3,0,251	0/1:31,0:30:32.68:33,0,135	0/1:15,0:15:36.43:36,0,118	0/1:18,0:18:83.30:83,0,269	0/1:31,0:31:99:149,0,564	0/0:22,0:21:32.66:0,33,688	0/1:32,0:31:99:107,0,448	0/0:11,0:10:20.92:0,21,207	0/1:11,0:11:60.07:60,0,71	0/0:20,0:17:0.30:0,0,1	1/1:13,0:11:0.47:1,0,0	0/1:25,0:25:66.75:67,0,517	0/0:16,0:14:8.31:0,8,113	0/0:66,0:61:9.67:0,10,905	0/0:20,0:20:8.73:0,9,439	0/1:22,5:27:89.68:90,0,841	0/1:19,0:17:51.56:82,0,52	0/1:15,0:14:8.38:8,0,398
chr10	108145552	.	CAT	C	408.37	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=8.393;DP=641;FS=53.630;HRun=0;HaplotypeScore=128.7183;InbreedingCoeff=-0.0675;MQ=48.60;MQ0=23;MQRankSum=0.509;QD=1.11;ReadPosRankSum=-0.609;VQSLOD=0.3970;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:53,0:51:87.79:88,0,740	1/1:13,0:12:2.99:25,3,0	./.	0/0:3,0:1:3.01:0,3,45	0/0:20,0:20:19.27:0,19,316	0/1:20,0:18:4.23:4,0,235	0/0:31,0:30:30.91:0,31,592	0/0:24,0:22:50.42:0,50,436	0/0:28,0:28:25.25:0,25,342	0/0:18,0:17:17.33:0,17,503	0/1:22,0:21:41.79:42,0,180	1/1:30,0:29:2.92:91,3,0	0/1:14,0:14:49.73:50,0,68	0/1:21,0:21:73.41:73,0,246	0/1:32,0:32:55.26:55,0,520	0/0:20,0:19:18.56:0,19,369	0/1:34,0:33:65.96:66,0,419	0/0:13,0:12:26.91:0,27,303	0/0:13,0:13:1.25:0,1,74	0/1:22,0:19:0.04:0,0,0	0/0:19,0:16:0.47:0,0,1	0/0:21,5:26:18:0,18,512	0/0:12,6:16:11.96:0,12,143	0/1:66,0:61:14:14,0,799	0/0:20,0:20:33.40:0,33,436	0/1:27,0:27:31.64:32,0,567	0/0:20,0:18:14.05:0,14,65	0/1:13,0:12:11.88:12,0,304
chr10	108145554	.	TACACACAC	T	567.75	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=3.490;DP=675;FS=8.191;HRun=0;HaplotypeScore=190.3890;InbreedingCoeff=0.7143;MQ=49.02;MQ0=22;MQRankSum=-4.875;QD=18.92;ReadPosRankSum=-0.028;VQSLOD=2.4148;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:96.33:0,96,3421	0/0:13,0:12:15.05:0,15,381	./.	0/0:5,0:2:6.02:0,6,244	0/0:19,0:20:27.09:0,27,1054	0/0:21,0:19:24.08:0,24,913	0/0:36,0:35:69.24:0,69,2533	0/0:25,0:23:51.17:0,51,1171	0/0:30,0:30:39.02:0,39,1337	0/0:20,0:19:51.18:0,51,1843	0/0:22,0:21:33.11:0,33,1063	1/1:13,16:29:18.56:658,19,0	0/0:17,0:17:30.99:0,31,1004	0/0:20,0:21:42.14:0,42,1403	0/0:31,0:32:66.25:0,66,2170	0/0:23,0:22:35.74:0,36,1313	0/0:34,0:33:58.75:0,59,1955	0/0:14,0:13:24.08:0,24,800	0/0:14,0:14:24.08:0,24,666	0/0:21,0:19:5.15:0,5,193	0/0:21,0:18:6.02:0,6,165	0/0:30,0:30:47.19:0,47,1841	0/0:18,0:17:14.28:0,14,550	0/0:64,0:60:84.31:0,84,3152	0/0:22,0:22:45.15:0,45,1680	0/0:28,0:28:60.16:0,60,1929	0/0:19,0:18:24:0,24,603	0/0:14,0:12:30.10:0,30,1109
chr10	108155409	.	TAC	T	247.77	PASS	AB=0.977;AC=20;AF=0.417;AN=48;BaseQRankSum=4.257;DP=515;FS=0.839;HRun=0;HaplotypeScore=80.9022;InbreedingCoeff=0.1385;MQ=58.45;MQ0=7;MQRankSum=-0.648;QD=0.96;ReadPosRankSum=1.452;VQSLOD=1.5248;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:37:13.06:13,0,238	1/1:12,0:16:5.68:28,6,0	./.	./.	0/0:15,0:15:9.01:0,9,100	0/1:9,0:8:22.73:23,0,74	1/1:12,4:16:5.75:64,6,0	./.	0/0:16,0:16:26.31:0,26,285	0/1:18,0:18:11.16:11,0,190	1/1:8,1:9:3.01:32,3,0	1/1:13,5:18:9.02:97,9,0	0/0:11,0:10:2.99:0,3,23	0/0:13,0:13:9.01:0,9,108	0/1:16,0:16:9.20:9,0,161	0/0:22,0:22:3.43:0,3,366	0/1:30,3:33:5.13:5,0,310	0/0:17,0:17:8.52:0,9,93	1/1:11,0:13:5.68:28,6,0	1/1:7,0:16:13.86:65,14,0	0/0:34,0:33:2.97:0,3,20	0/1:16,0:16:11.16:11,0,212	0/1:20,0:20:5.40:5,0,221	0/0:24,2:26:6.88:0,7,480	0/1:17,1:18:8.17:8,0,262	0/0:17,0:17:12.03:0,12,142	./.	0/0:8,0:8:5.04:0,5,47
chr10	108156929	.	ACTCT	A	118.04	PASS	AB=0.933;AC=6;AF=0.107;AN=56;BaseQRankSum=2.265;DP=550;FS=1.143;HRun=0;HaplotypeScore=103.6880;InbreedingCoeff=0.0773;MQ=68.83;MQ0=7;MQRankSum=0.376;QD=1.00;ReadPosRankSum=1.204;VQSLOD=1.4387;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:15.67:16,0,440	0/0:8,0:8:9.03:0,9,147	0/0:24,0:12:2.57:0,3,16	0/0:42,0:24:6.02:0,6,98	1/1:8,9:16:6.02:96,6,0	0/0:15,0:16:22.03:0,22,335	0/0:25,0:25:39.60:0,40,721	0/0:31,0:31:18.04:0,18,219	0/0:13,0:14:13.66:0,14,311	0/1:19,2:22:9.65:10,0,631	0/0:14,0:18:29.84:0,30,605	0/0:15,0:13:5.95:0,6,43	0/0:9,0:9:15.04:0,15,295	0/0:8,0:8:9.03:0,9,189	0/0:15,0:25:11.77:0,12,156	0/1:17,0:17:36.76:37,0,576	0/0:27,0:27:48.12:0,48,907	0/0:24,0:24:42.11:0,42,728	0/0:16,0:16:20.94:0,21,286	0/0:17,0:17:3.01:0,3,54	0/0:16,0:15:2.96:0,3,19	0/0:9,0:9:21.07:0,21,439	0/0:12,0:11:11.63:0,12,269	0/1:26,1:28:77.20:77,0,842	0/0:23,0:22:4.62:0,5,529	0/0:18,0:18:28.44:0,28,574	0/0:21,0:20:21.01:0,21,262	0/0:13,0:13:12.04:0,12,266
chr10	108156940	.	C	CTG	138.67	PASS	AB=0.936;AC=5;AF=0.089;AN=56;BaseQRankSum=6.551;DP=566;FS=3.088;HRun=0;HaplotypeScore=93.8875;InbreedingCoeff=-0.0933;MQ=59.89;MQ0=10;MQRankSum=-1.322;QD=1.43;ReadPosRankSum=-1.686;VQSLOD=1.2389;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:74.36:0,74,750	0/0:6,0:6:9.45:0,9,74	0/0:19,0:7:15.01:0,15,151	0/0:35,0:18:31.78:0,32,335	0/0:23,0:22:29.88:0,30,232	0/0:18,0:18:42.03:0,42,472	0/0:24,0:24:60.03:0,60,691	0/0:34,0:34:83.22:0,83,662	0/0:15,0:15:36.01:0,36,376	0/0:25,0:25:71.76:0,72,807	0/0:25,0:25:41.87:0,42,483	0/1:10,0:8:7.69:8,0,49	0/0:8,0:8:20.75:0,21,223	0/0:11,0:11:20.93:0,21,215	0/1:26,0:26:4.03:4,0,212	0/0:18,0:16:43.57:0,44,507	0/0:23,0:23:63.04:0,63,760	0/0:25,0:24:60:0,60,671	0/1:19,0:19:37.27:37,0,180	0/1:9,5:15:9.64:10,0,55	0/0:16,0:15:8.58:0,9,57	0/0:11,0:11:24.04:0,24,292	0/0:14,0:13:15.02:0,15,184	0/0:32,0:31:89.98:0,90,972	0/0:22,0:21:59.84:0,60,640	0/0:17,0:16:47.88:0,48,532	0/1:26,1:26:52.25:185,0,52	0/0:14,0:14:35.99:0,36,374
chr10	108156944	.	C	CTCTCTG	1127.29	PASS	AB=0.850;AC=9;AF=0.161;AN=56;BaseQRankSum=0.337;DP=552;FS=6.433;HRun=0;HaplotypeScore=124.9452;InbreedingCoeff=0.3607;MQ=55.92;MQ0=10;MQRankSum=-2.795;QD=8.67;ReadPosRankSum=-4.813;VQSLOD=-0.2826;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:66.08:0,66,1009	1/1:5,0:5:9:145,9,0	0/0:17,0:5:12.46:0,12,123	0/0:32,0:14:3.89:0,4,67	0/0:21,0:20:23.99:0,24,239	0/0:18,0:18:45.53:0,46,718	0/0:23,0:23:51.07:0,51,890	0/1:35,0:35:13.08:313,0,13	0/0:14,0:14:33.03:0,33,470	0/0:26,0:26:61.25:0,61,1001	0/0:26,0:26:44.92:0,45,701	0/1:9,0:7:12.76:38,0,13	0/0:8,0:8:20.76:0,21,293	0/0:10,0:10:20.95:0,21,262	0/0:22,0:22:26.82:0,27,230	0/0:18,0:16:45.08:0,45,757	0/0:22,0:22:60.05:0,60,1026	0/0:23,0:22:54:0,54,863	1/1:5,12:19:23.98:475,24,0	0/1:16,1:17:4.73:73,0,5	0/1:8,8:16:12.43:12,0,35	0/0:10,0:10:24.04:0,24,392	0/0:15,0:14:18.01:0,18,279	0/0:32,0:31:87.12:0,87,1376	0/0:23,0:22:50.76:0,51,787	0/0:20,0:19:56.08:0,56,811	0/1:13,14:26:16.75:218,0,17	0/0:9,0:9:27.01:0,27,389
chr10	108156961	.	T	TCACACACACACACACA	422.19	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=0.530;DP=507;FS=0.973;HRun=0;HaplotypeScore=202.3275;InbreedingCoeff=0.2012;MQ=51.07;MQ0=11;MQRankSum=-4.405;QD=4.44;ReadPosRankSum=-4.296;VQSLOD=1.8171;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:24.97:0,25,879	0/0:7,0:7:6.02:0,6,185	0/0:12,0:3:0:0,0,0	0/0:16,0:4:6.02:0,6,135	0/0:21,0:20:23.60:0,24,872	0/0:17,0:18:28.02:0,28,842	0/0:20,0:20:18.06:0,18,507	0/1:25,0:25:75.56:122,0,76	0/0:13,0:13:24.05:0,24,700	0/0:22,0:22:39.07:0,39,1134	0/0:26,0:26:30.09:0,30,1084	1/1:7,1:10:6.02:285,6,0	0/0:9,0:9:21.07:0,21,817	0/0:11,0:11:21.72:0,22,874	0/0:22,0:22:29.62:0,30,901	0/0:16,0:16:26.78:0,27,914	0/0:21,0:21:29.31:0,29,1153	0/0:23,0:22:24.01:0,24,803	0/1:15,0:15:91.76:92,0,100	0/0:17,0:17:8.99:0,9,105	0/1:17,0:15:12.52:13,0,235	0/0:13,0:13:21.07:0,21,809	0/0:14,0:14:18.06:0,18,719	0/0:27,0:26:48.15:0,48,1950	0/0:24,0:24:35.69:0,36,1282	0/0:21,0:20:22.49:0,22,888	0/1:26,0:24:31.21:31,0,536	0/0:8,0:8:21.07:0,21,758
chr10	108159284	.	A	AGAGCACT	9646.13	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-6.024;DP=578;FS=0.436;HRun=0;HaplotypeScore=115.5831;InbreedingCoeff=0.9457;MQ=54.50;MQ0=16;MQRankSum=-13.673;QD=82.45;ReadPosRankSum=-2.160;VQSLOD=5.0399;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,2591	1/1:3,9:12:21.07:844,21,0	0/0:25,0:14:42.14:0,42,1054	0/0:22,0:12:30.57:0,31,783	0/0:18,0:18:54.19:0,54,1365	0/0:20,0:20:57.18:0,57,1449	0/0:32,0:31:84.24:0,84,2075	1/1:19,12:29:75.26:2741,75,0	0/0:19,0:19:54.19:0,54,1424	0/0:16,0:16:45.15:0,45,1167	0/0:18,0:18:54.19:0,54,1424	1/1:3,15:20:45.15:1811,45,0	0/0:26,0:26:69.22:0,69,1737	0/0:16,0:16:48.16:0,48,1266	0/0:16,0:16:45.15:0,45,1162	0/0:23,0:24:69.22:0,69,1719	0/0:34,0:34:93.32:0,93,2381	0/0:31,0:31:87.28:0,87,2165	1/1:9,7:16:45.15:1662,45,0	1/1:2,6:8:15.05:603,15,0	1/1:3,4:7:6.02:241,6,0	0/0:18,0:17:39.13:0,39,1027	0/0:13,0:13:33.11:0,33,838	0/0:25,0:25:75.26:0,75,1918	0/0:23,0:22:63.22:0,63,1567	0/0:26,0:26:75.25:0,75,1828	1/1:3,15:20:45.15:1745,45,0	0/0:2,0:1:3.01:0,3,79
chr10	108159426	.	TA	T	1391.54	PASS	AB=0.837;AC=13;AF=0.232;AN=56;BaseQRankSum=7.976;DP=494;FS=0.956;HRun=12;HaplotypeScore=55.0524;InbreedingCoeff=0.6787;MQ=68.99;MQ0=0;MQRankSum=-0.650;QD=10.79;ReadPosRankSum=-1.031;VQSLOD=2.6249;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:30:86.95:0,87,843	1/1:0,4:4:11.95:93,12,0	0/1:19,1:17:5.98:6,0,98	0/0:11,0:8:2.68:0,3,11	0/0:24,0:24:54.08:0,54,537	0/0:15,0:15:36.03:0,36,356	0/0:18,0:18:39.04:0,39,385	1/1:8,18:27:55.77:421,56,0	0/0:14,0:14:39.04:0,39,385	0/0:16,1:17:9.82:0,10,276	0/0:19,0:19:51.04:0,51,501	0/0:17,0:17:41.98:0,42,392	0/0:17,1:18:15.67:0,16,321	0/0:19,1:20:33.86:0,34,515	0/1:9,1:10:5.17:5,0,129	0/0:13,0:13:35.98:0,36,345	0/0:26,2:28:13.65:0,14,502	0/0:27,0:27:72.13:0,72,723	0/1:10,11:22:17.77:212,0,18	1/1:1,17:18:50.77:390,51,0	1/1:2,6:9:17.92:139,18,0	0/0:8,0:8:20.95:0,21,194	0/0:16,2:18:24.86:0,25,434	0/0:20,0:21:44.89:0,45,431	0/0:16,0:16:42.07:0,42,421	0/0:27,0:27:57.10:0,57,566	1/1:1,17:18:38.72:302,39,0	0/0:4,0:4:9.02:0,9,91
chr10	108160407	.	CACACACACACACAT	C	2126.20	PASS	AB=1.000;AC=10;AF=0.185;AN=54;BaseQRankSum=7.923;DP=642;FS=1.113;HRun=0;HaplotypeScore=220.7441;InbreedingCoeff=0.7761;MQ=55.70;MQ0=19;MQRankSum=-3.561;QD=16.11;ReadPosRankSum=-1.582;VQSLOD=2.3092;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:53:99:0,106,6305	0/0:13,0:12:8.21:0,8,43	0/1:22,0:4:8.01:8,0,40	0/0:21,0:7:2.99:0,3,24	0/0:16,0:17:24.07:0,24,1191	0/0:19,0:19:30.46:0,30,1754	0/0:23,0:23:38.91:0,39,1617	0/1:14,0:11:0.81:82,0,1	0/0:16,0:16:36.54:0,37,1670	0/0:34,0:34:93.09:0,93,4230	0/0:31,0:31:59.70:0,60,3355	1/1:18,2:20:23.69:620,24,0	0/0:12,0:11:20.40:0,20,789	0/0:22,0:22:51.11:0,51,2281	0/0:21,0:21:57.17:0,57,3073	0/0:8,0:8:18.06:0,18,1025	0/0:32,0:31:81.20:0,81,3895	0/0:24,0:24:54.51:0,55,3443	1/1:30,1:30:64.81:600,65,0	1/1:30,2:32:17.99:449,18,0	./.	0/0:31,0:31:22.21:0,22,1456	0/0:21,0:20:53.89:0,54,2535	0/0:40,0:40:86.92:0,87,3836	0/0:16,0:16:31.28:0,31,1953	0/0:21,0:21:57.08:0,57,2836	1/1:10,3:13:29.98:531,30,0	0/0:12,0:11:24.08:0,24,1266
chr10	108160409	.	CACACACACACAT	C	2578.95	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=8.370;DP=659;FS=1.050;HRun=0;HaplotypeScore=201.1060;InbreedingCoeff=0.8576;MQ=55.19;MQ0=19;MQRankSum=-5.058;QD=17.31;ReadPosRankSum=-1.845;VQSLOD=2.5160;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:55:99:0,112,5433	1/1:13,0:12:8.10:35,8,0	0/1:24,0:4:8.01:8,0,40	0/0:28,0:7:2.99:0,3,24	0/0:16,0:17:24.07:0,24,1016	0/0:19,0:19:30.46:0,30,1501	0/0:25,0:25:24.92:0,25,1392	1/1:13,0:10:17.77:124,18,0	0/0:17,0:17:39.55:0,40,1491	0/0:34,0:34:96.03:0,96,3564	0/0:30,0:30:59.66:0,60,2928	1/1:2,18:20:23.83:823,24,0	0/0:12,0:11:20.40:0,20,689	0/0:22,0:22:51.11:0,51,1967	0/0:23,0:23:59.79:0,60,2671	0/0:8,0:8:17.85:0,18,868	0/0:31,0:30:81.20:0,81,3340	0/0:26,0:26:63.49:0,63,3038	1/1:6,25:30:70.35:785,70,0	1/1:7,24:31:17.99:518,18,0	./.	0/0:31,0:31:22.11:0,22,1254	0/0:21,0:20:56.85:0,57,2201	0/0:40,0:40:86.92:0,87,3302	0/0:16,0:16:31.28:0,31,1674	0/0:21,0:21:57.08:0,57,2392	1/1:17,0:17:35.87:468,36,0	0/0:12,0:11:24.04:0,24,1066
chr10	108160413	.	CACACACAT	C	2032.63	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=8.738;DP=665;FS=0.000;HRun=0;HaplotypeScore=160.8075;InbreedingCoeff=0.8549;MQ=54.34;MQ0=23;MQRankSum=-5.111;QD=13.64;ReadPosRankSum=-3.331;VQSLOD=1.8221;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:55:99:0,107,3771	1/1:2,11:12:9.03:244,9,0	0/1:26,0:3:8.01:8,0,40	0/0:30,0:6:2.99:0,3,24	0/0:18,0:18:30.03:0,30,708	0/0:19,0:19:30.41:0,30,995	0/0:27,0:27:30.84:0,31,1030	1/1:14,0:10:20.82:148,21,0	0/0:16,0:16:39.52:0,40,1005	0/0:34,0:34:87.76:0,88,2299	0/0:30,0:30:65.45:0,65,2115	1/1:20,0:20:23.96:488,24,0	0/0:11,0:10:20.40:0,20,490	0/0:21,0:21:38.02:0,38,1337	0/0:23,0:23:59.70:0,60,1825	0/0:9,0:9:10.26:0,10,617	0/0:31,0:30:81.08:0,81,2266	0/0:26,0:26:52.50:0,53,2064	1/1:29,0:28:71.77:620,72,0	1/1:30,0:30:17.99:322,18,0	./.	0/0:32,0:32:22.14:0,22,853	0/0:23,0:22:62.68:0,63,1614	0/0:39,0:39:86.90:0,87,2230	0/0:16,0:16:31.28:0,31,1112	0/0:22,0:22:49.44:0,49,1569	1/1:16,0:16:35.87:385,36,0	0/0:12,0:11:24.04:0,24,765
chr10	108160419	.	CAT	C	1209.65	PASS	AB=0.976;AC=20;AF=0.357;AN=56;BaseQRankSum=10.399;DP=661;FS=8.338;HRun=0;HaplotypeScore=100.6779;InbreedingCoeff=0.5117;MQ=53.80;MQ0=23;MQRankSum=-3.595;QD=4.84;ReadPosRankSum=-2.282;VQSLOD=1.7063;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:57,1:55:25.30:0,25,1407	1/1:11,0:10:8.93:64,9,0	0/1:27,0:3:8.01:8,0,40	0/0:30,0:4:2.99:0,3,24	0/1:18,0:18:2.97:3,0,260	0/1:16,1:17:35.95:36,0,383	0/0:25,0:25:23.91:0,24,503	1/1:16,0:10:26.76:190,27,0	0/0:17,0:17:40.53:0,41,461	0/0:33,0:33:61.03:0,61,921	0/0:31,0:31:68.80:0,69,879	1/1:20,0:20:23.50:153,24,0	0/0:13,0:12:26.23:0,26,257	0/1:19,2:21:24.51:25,0,434	0/0:23,0:23:37.17:0,37,714	0/1:10,0:10:3.25:3,0,239	0/0:31,0:30:53.59:0,54,926	0/0:26,0:26:5.40:0,5,809	1/1:29,0:28:72.42:504,72,0	1/1:29,0:29:17.71:113,18,0	1/1:20,0:17:2.60:10,3,0	0/0:30,0:30:12.35:0,12,251	0/0:23,0:22:51.89:0,52,771	0/0:35,0:35:33.61:0,34,808	0/1:15,0:15:5.80:6,0,359	0/0:25,0:25:33.81:0,34,555	1/1:17,0:17:38.62:282,39,0	0/0:11,0:10:12.36:0,12,319
chr10	108161431	.	TC	T	6129.29	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.147;DP=672;FS=4.546;HRun=1;HaplotypeScore=66.0499;InbreedingCoeff=0.9999;MQ=86.03;MQ0=0;MQRankSum=-5.231;QD=40.86;ReadPosRankSum=-0.839;VQSLOD=5.0798;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1871	1/1:0,15:15:42.14:587,42,0	0/0:21,0:21:63.14:0,63,929	0/0:26,0:25:63.21:0,63,971	0/0:25,0:25:72.25:0,72,1149	0/0:29,0:29:87.28:0,87,1366	0/0:25,0:25:72.25:0,72,1149	1/1:0,23:23:69.20:928,69,0	0/0:29,0:29:87.28:0,87,1365	0/0:22,0:22:66.22:0,66,1035	0/0:18,0:18:51.16:0,51,791	0/0:20,0:20:60.20:0,60,957	0/0:22,0:22:66.21:0,66,1032	0/0:23,0:23:69.22:0,69,1079	0/0:25,0:25:75.24:0,75,1173	0/0:22,0:22:66.23:0,66,1055	0/0:27,0:27:81.28:0,81,1291	0/0:22,0:22:66.23:0,66,1055	1/1:0,19:19:57.19:796,57,0	1/1:0,18:18:54.18:755,54,0	1/1:0,50:50:99:2056,147,0	0/0:29,0:29:87.28:0,87,1364	0/0:18,0:18:51.17:0,51,815	0/0:26,0:26:78.27:0,78,1247	0/0:16,0:16:48.16:0,48,767	0/0:28,0:28:84.28:0,84,1323	1/1:0,25:25:72.24:1007,72,0	0/0:10,0:10:30.10:0,30,479
chr10	108162090	.	CT	C	762.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.160;DP=694;FS=0.800;HRun=2;HaplotypeScore=64.2654;InbreedingCoeff=0.9992;MQ=88.12;MQ0=0;MQRankSum=-2.610;QD=25.41;ReadPosRankSum=1.588;VQSLOD=3.4069;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,141,2020	0/0:12,0:12:33.10:0,33,475	0/0:27,0:27:69.65:0,70,1071	0/0:26,0:26:69.16:0,69,985	0/0:28,0:28:84.28:0,84,1258	0/0:24,0:24:72.24:0,72,1077	0/0:16,0:16:45.14:0,45,656	0/0:44,0:44:99:0,123,1825	0/0:30,0:30:90.30:0,90,1349	0/0:39,0:39:99:0,117,1736	0/0:21,0:21:60.20:0,60,899	1/1:2,28:30:66.21:857,66,0	0/0:15,0:15:39.11:0,39,561	0/0:19,0:19:57.19:0,57,852	0/0:22,0:22:60.18:0,60,860	0/0:25,0:25:72.24:0,72,1079	0/0:39,0:39:99:0,117,1745	0/0:29,0:29:84.28:0,84,1245	0/0:14,0:14:42.14:0,42,628	0/0:28,0:28:81.27:0,81,1211	0/0:26,0:26:78.26:0,78,1166	0/0:29,0:29:87.29:0,87,1300	0/0:21,0:21:60.20:0,60,897	0/0:16,0:16:48.16:0,48,720	0/0:20,0:20:60.18:0,60,876	0/0:13,0:13:36.11:0,36,522	0/0:19,0:19:57.18:0,57,821	0/0:11,0:11:33.11:0,33,493
chr10	108162375	.	T	TC	987.11	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.842;DP=681;FS=11.455;HRun=3;HaplotypeScore=63.3608;InbreedingCoeff=0.9987;MQ=86.35;MQ0=1;MQRankSum=-1.366;QD=35.25;ReadPosRankSum=0.061;VQSLOD=3.3551;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,156,1855	0/0:13,0:13:39.12:0,39,468	0/0:18,0:18:45.04:0,45,494	0/0:32,0:31:87.17:0,87,1004	0/0:25,0:25:72.22:0,72,864	0/0:27,0:27:75.23:0,75,898	0/0:21,0:22:56.19:0,56,643	0/0:30,0:30:75.20:0,75,873	0/0:15,0:15:45.13:0,45,528	0/0:28,0:28:84.26:0,84,1007	0/0:20,0:20:60.18:0,60,720	1/1:0,28:28:78.26:1082,78,0	0/0:17,0:17:51.16:0,51,611	0/0:26,0:26:75.22:0,75,888	0/0:23,0:23:69.20:0,69,816	0/0:14,0:14:36.11:0,36,432	0/0:51,0:51:99:0,147,1763	0/0:27,0:27:75.23:0,75,899	0/0:16,0:16:48.13:0,48,563	0/0:29,0:29:87.27:0,87,1044	0/0:20,0:20:60.17:0,60,708	0/0:24,0:24:72.21:0,72,855	0/0:19,0:19:54.17:0,54,647	0/0:27,0:27:75.15:0,75,880	0/0:18,0:18:51.16:0,51,612	0/0:21,0:21:63.19:0,63,748	0/0:27,0:27:78.23:0,78,924	0/0:9,0:9:27.08:0,27,324
chr10	108163195	.	T	TA	384.13	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.901;DP=510;FS=3.726;HRun=6;HaplotypeScore=50.3089;InbreedingCoeff=0.7607;MQ=68.30;MQ0=2;MQRankSum=0.977;QD=25.61;ReadPosRankSum=0.945;VQSLOD=3.7939;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1010	0/0:10,0:10:18.04:0,18,183	0/0:3,0:3:0.10:0,0,19	0/0:9,0:8:16.33:0,16,106	0/0:36,0:36:96.21:0,96,977	0/0:23,0:23:66.13:0,66,665	0/0:13,0:13:30.07:0,30,306	0/0:27,0:27:72.16:0,72,734	0/0:10,0:10:27.03:0,27,261	0/0:26,0:26:69.15:0,69,704	0/0:22,0:22:57.13:0,57,582	1/1:2,13:15:39.12:479,39,0	0/0:18,0:18:54.09:0,54,541	0/0:18,0:18:48.11:0,48,490	0/0:13,0:13:30.05:0,30,299	0/0:19,0:19:45.10:0,45,459	0/0:38,0:38:99:0,105,1071	0/0:20,0:20:51.11:0,51,516	0/0:16,0:16:39.04:0,39,377	0/0:22,0:22:57.11:0,57,575	0/0:13,0:13:36.08:0,36,367	0/0:7,0:7:12.03:0,12,122	0/0:14,0:14:36.04:0,36,351	0/0:11,0:11:33.06:0,33,330	0/0:19,0:19:51.11:0,51,520	0/0:23,0:23:60.13:0,60,612	0/0:16,0:16:39.09:0,39,398	0/0:13,0:13:36.08:0,36,367
chr10	108165081	.	A	ATTTTTTTTCTTTT	1235.08	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.864;DP=565;FS=9.112;HRun=0;HaplotypeScore=194.6772;InbreedingCoeff=0.9734;MQ=67.72;MQ0=4;MQRankSum=-5.681;QD=45.74;ReadPosRankSum=-3.054;VQSLOD=1.7498;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,110,3621	0/0:11,0:11:26.88:0,27,838	0/0:22,0:16:30.97:0,31,605	0/0:16,0:13:19.79:0,20,291	0/0:16,0:14:42.13:0,42,1288	0/0:23,0:22:63.21:0,63,2175	0/0:17,0:17:48.16:0,48,1600	0/0:38,0:38:96.23:0,96,2353	0/0:15,0:15:42.14:0,42,1360	0/0:20,0:20:51.17:0,51,1424	0/0:12,0:12:33.11:0,33,965	1/1:12,10:26:30.99:1330,31,0	0/0:16,0:16:45.15:0,45,1454	0/0:13,0:13:24.06:0,24,756	0/0:14,0:14:36.12:0,36,979	0/0:16,0:18:54.17:0,54,1488	0/0:39,0:39:99:0,108,3255	0/0:25,0:26:63.21:0,63,1966	0/0:31,0:29:78.26:0,78,1906	0/0:14,0:14:26.94:0,27,1392	0/0:15,0:15:45.15:0,45,1363	0/0:14,0:14:33.09:0,33,956	0/0:12,0:12:36.12:0,36,1067	0/0:26,0:26:75.17:0,75,2386	0/0:20,0:20:54.13:0,54,1486	0/0:29,0:29:81.25:0,81,2379	0/0:14,0:14:33.10:0,33,842	0/0:5,0:5:15.05:0,15,484
chr10	108184473	.	C	CACAT	2195.45	PASS	AB=0.922;AC=6;AF=0.107;AN=56;BaseQRankSum=2.311;DP=1184;FS=19.083;HRun=0;HaplotypeScore=383.6235;InbreedingCoeff=0.2168;MQ=40.38;MQ0=30;MQRankSum=-1.884;QD=11.87;ReadPosRankSum=-0.163;VQSLOD=1.6405;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:42.10:0,42,647	0/0:13,0:13:13.18:0,13,116	0/0:64,0:18:30.08:0,30,391	0/0:70,0:29:37.23:0,37,568	0/0:39,0:38:55.61:0,56,722	0/0:24,0:23:35.82:0,36,550	0/0:49,0:48:88.71:0,89,1394	0/1:62,0:53:99:489,0,397	0/0:47,0:47:60.20:0,60,959	0/0:78,0:77:99:0,134,2060	0/0:32,0:32:50.84:0,51,710	0/0:37,0:36:36.12:0,36,579	0/0:44,0:43:80.65:0,81,1209	0/0:49,0:49:68.87:0,69,1046	0/0:41,0:39:42.11:0,42,643	0/0:39,0:39:63.18:0,63,987	0/0:30,0:28:72.18:0,72,1178	0/0:29,0:29:72.22:0,72,1165	1/1:20,3:18:9.09:479,9,0	0/1:24,7:31:99:272,0,289	0/1:43,1:40:61.46:735,0,61	0/0:56,0:55:69.50:0,70,927	0/0:34,0:34:53.82:0,54,767	0/0:45,0:44:76.92:0,77,1211	0/0:63,0:63:80.70:0,81,1111	0/0:65,0:63:99:0,132,1810	0/1:22,3:25:99:346,0,276	0/0:22,0:21:44.65:0,45,605
chr10	108184504	.	ACG	A	2500.33	PASS	AB=0.998;AC=28;AF=0.500;AN=56;BaseQRankSum=13.762;DP=927;FS=24.678;HRun=0;HaplotypeScore=247.7324;InbreedingCoeff=-0.1546;MQ=43.69;MQ0=24;MQRankSum=-4.696;QD=3.39;ReadPosRankSum=-5.762;VQSLOD=0.5254;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:33:12.74:13,0,575	1/1:11,0:11:12.76:102,13,0	0/0:25,0:3:8.89:0,9,60	0/1:30,0:7:39.39:39,0,41	0/1:32,1:32:74.66:75,0,272	0/0:20,0:19:20.71:0,21,304	0/1:48,0:47:89.65:90,0,741	1/1:26,0:20:41.14:301,41,0	0/1:35,0:35:29.06:29,0,751	0/1:57,0:55:99:173,0,898	0/1:24,0:23:95.25:95,0,310	0/1:31,0:30:37.20:142,0,37	0/0:36,0:35:3.27:0,3,843	0/0:37,0:37:65.02:0,65,889	0/1:38,0:36:20.71:21,0,357	0/1:35,0:35:22.81:23,0,654	0/1:40,0:39:4.42:4,0,748	0/0:32,0:32:74.82:0,75,1070	1/1:17,0:16:34.79:260,35,0	1/1:27,0:27:54.90:378,55,0	1/1:45,2:42:32.56:348,33,0	0/1:47,0:47:99:113,0,577	0/1:28,0:28:58.05:58,0,319	0/0:39,0:38:29.19:0,29,967	0/1:42,0:42:76.95:77,0,622	0/1:49,0:45:65.10:65,0,1062	1/1:22,1:23:31.52:237,32,0	0/1:16,0:16:37.58:38,0,227
chr10	108184506	.	GCA	G	863.95	PASS	AB=0.926;AC=15;AF=0.278;AN=54;BaseQRankSum=2.473;DP=915;FS=0.000;HRun=0;HaplotypeScore=249.0710;InbreedingCoeff=-0.4161;MQ=43.78;MQ0=25;MQRankSum=2.279;QD=1.59;ReadPosRankSum=-0.707;VQSLOD=2.0951;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:90.17:90,0,460	0/0:12,0:12:6.47:0,6,55	0/0:23,0:3:6.02:0,6,86	./.	0/1:30,2:31:67.81:68,0,199	0/0:17,0:17:6.80:0,7,214	0/1:45,2:47:99:139,0,513	0/0:28,0:21:7.22:0,7,38	0/1:33,2:35:36.51:37,0,701	0/1:54,1:53:11.15:11,0,735	0/1:19,5:23:99:164,0,200	0/0:31,0:30:19.68:0,20,242	0/1:31,2:34:14.51:15,0,711	0/0:36,0:36:51.12:0,51,724	0/1:33,2:34:99:134,0,323	0/1:30,4:34:99:101,0,600	0/1:34,6:39:33.19:33,0,703	0/0:30,1:31:25.53:0,26,813	0/0:17,0:16:11.50:0,12,69	0/0:26,0:26:3.09:0,3,18	0/1:47,0:41:2.10:2,0,70	0/0:46,1:47:3.67:0,4,454	0/1:27,1:28:13.57:14,0,250	0/1:36,2:38:80.29:80,0,752	0/1:41,1:42:46.35:46,0,464	0/0:48,0:44:61.60:0,62,1071	0/0:23,0:23:23.77:0,24,163	0/1:8,5:14:77.60:78,0,185
chr10	108187764	.	T	TGAGTC	2520.95	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.190;DP=871;FS=9.157;HRun=0;HaplotypeScore=157.8846;InbreedingCoeff=0.9993;MQ=80.65;MQ0=0;MQRankSum=-0.540;QD=76.39;ReadPosRankSum=1.173;VQSLOD=5.1455;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,157,3555	0/0:12,0:12:36.12:0,36,801	0/0:26,0:26:69.22:0,69,1335	0/0:30,0:30:53.81:0,54,1297	0/0:30,0:30:90.29:0,90,2001	0/0:24,0:24:72.25:0,72,1674	0/0:32,0:32:93.28:0,93,2056	0/0:42,0:42:99:0,123,2757	0/0:32,0:32:96.33:0,96,2207	0/0:40,0:40:99:0,117,2530	0/0:20,0:20:54.19:0,54,1259	1/1:2,29:33:81.23:2616,81,0	0/0:45,0:45:99:0,126,2855	0/0:29,0:29:87.28:0,87,1945	0/0:45,0:45:99:0,135,3091	0/0:44,0:44:99:0,129,2970	0/0:24,0:24:72.21:0,72,1572	0/0:26,0:26:78.24:0,78,1763	0/0:20,0:20:57.19:0,57,1255	0/0:29,0:29:87.30:0,87,1970	0/0:65,0:65:99:0,187,4256	0/0:28,0:28:84.29:0,84,1945	0/0:13,0:13:39.12:0,39,864	0/0:33,0:33:96.28:0,96,2142	0/0:22,0:22:66.22:0,66,1495	0/0:34,0:34:99:0,102,2370	0/0:30,0:30:87.30:0,87,2018	0/0:10,0:10:30.05:0,30,562
chr10	108194302	.	GAAA	G	2002.46	PASS	AB=0.741;AC=13;AF=0.232;AN=56;BaseQRankSum=3.641;DP=588;FS=9.381;HRun=15;HaplotypeScore=97.3451;InbreedingCoeff=0.9053;MQ=68.15;MQ0=9;MQRankSum=0.212;QD=15.89;ReadPosRankSum=3.287;VQSLOD=2.1627;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:40:86.69:0,87,1344	1/1:2,6:7:14.99:166,15,0	0/0:41,0:20:34.78:0,35,386	0/0:36,0:22:24.23:0,24,189	0/0:17,0:19:48.13:0,48,756	0/0:24,0:28:72.10:0,72,1021	0/0:17,0:22:50.18:0,50,819	1/1:7,14:20:45.02:489,45,0	0/0:15,0:18:40.27:0,40,550	0/0:23,1:24:11.07:0,11,602	0/0:13,0:14:27.06:0,27,443	0/1:13,0:20:0.76:1,0,200	0/0:17,0:17:36.10:0,36,557	0/0:15,0:17:41.97:0,42,585	0/0:31,0:35:83.60:0,84,1256	0/0:13,0:14:42.12:0,42,673	0/0:25,0:29:70.44:0,70,1135	0/0:7,0:9:12.04:0,12,182	1/1:8,18:28:51.73:574,52,0	1/1:3,8:15:37.40:390,37,0	1/1:5,5:11:6.01:154,6,0	0/0:14,0:18:33.09:0,33,542	0/0:13,0:15:40.28:0,40,585	0/0:12,0:13:27.05:0,27,377	0/0:15,0:17:43.36:0,43,663	0/0:17,0:22:60.12:0,60,885	1/1:7,16:22:38.78:409,39,0	0/0:11,0:11:29.08:0,29,431
chr10	108195174	.	T	TTTCA	4920.75	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-7.371;DP=707;FS=3.646;HRun=0;HaplotypeScore=110.1446;InbreedingCoeff=0.9225;MQ=62.75;MQ0=8;MQRankSum=-0.006;QD=18.64;ReadPosRankSum=1.513;VQSLOD=4.4743;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,21:34:27.09:629,27,0	1/1:10,0:13:9.02:138,9,0	0/0:32,0:19:3.01:0,3,40	0/0:25,0:10:3.01:0,3,43	0/0:29,0:29:45.15:0,45,670	0/0:36,0:36:45.15:0,45,660	0/0:29,0:29:48.12:0,48,681	1/1:31,0:30:21.04:272,21,0	1/1:13,9:22:15.05:350,15,0	0/0:36,0:36:45.14:0,45,617	0/0:21,0:21:39.13:0,39,599	1/1:1,0:23:24.08:310,24,0	0/0:21,0:21:39.13:0,39,566	0/0:19,0:19:24.07:0,24,344	0/0:31,0:31:66.22:0,66,991	0/0:23,0:23:48.16:0,48,734	1/1:6,11:17:24.08:559,24,0	1/1:12,17:31:33.11:738,33,0	1/1:10,6:16:18.06:380,18,0	1/1:11,17:28:42.61:915,43,0	1/1:9,5:14:12.04:280,12,0	0/0:19,0:18:33.11:0,33,500	0/0:31,0:31:48.15:0,48,699	0/0:28,0:28:42.14:0,42,634	0/0:22,0:22:42.13:0,42,620	0/0:35,0:35:48.16:0,48,731	1/1:16,15:31:15.52:350,16,0	0/0:6,0:6:9.03:0,9,130
chr10	108196576	.	C	CA	1254.68	PASS	AB=0.893;AC=19;AF=0.339;AN=56;BaseQRankSum=-3.908;DP=692;FS=2.747;HRun=14;HaplotypeScore=92.2673;InbreedingCoeff=0.1674;MQ=66.40;MQ0=0;MQRankSum=-0.011;QD=3.71;ReadPosRankSum=-3.225;VQSLOD=0.5563;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:41:70.80:0,71,440	1/1:3,7:11:7.52:172,8,0	0/0:17,0:15:6.94:0,7,30	0/0:17,0:12:5.03:0,5,28	0/0:29,0:32:60.85:0,61,388	0/1:17,3:19:34.69:35,0,186	0/0:25,0:26:52.18:0,52,333	1/1:9,15:24:0.43:245,0,0	0/1:26,3:29:6.80:7,0,94	0/0:28,1:30:15.86:0,16,215	0/0:17,1:19:4.56:0,5,147	0/0:34,0:34:4:0,4,257	0/1:27,0:27:7.48:7,0,156	0/1:22,0:24:22.44:22,0,111	0/0:28,1:29:11.82:0,12,203	0/1:29,3:33:8.39:8,0,254	0/1:18,5:27:98.94:99,0,172	0/0:30,2:32:6.18:0,6,292	1/1:11,10:22:20.06:281,20,0	1/1:8,11:20:18:158,18,0	0/1:13,10:23:41.08:175,0,41	0/0:18,0:18:26.46:0,26,172	0/1:14,3:18:21.40:21,0,128	0/0:20,0:24:33:0,33,203	0/0:13,1:17:7.07:0,7,153	0/1:28,1:30:3.11:3,0,222	1/1:9,21:30:7.72:189,8,0	0/0:16,0:17:40.39:0,40,256
chr10	108200416	.	C	CTT	619	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.216;DP=546;FS=0.964;HRun=8;HaplotypeScore=62.2489;InbreedingCoeff=0.9773;MQ=74.68;MQ0=0;MQRankSum=-2.941;QD=32.58;ReadPosRankSum=0.569;VQSLOD=3.6249;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:71.89:0,72,769	0/0:6,0:6:18.05:0,18,201	0/0:14,0:14:30.07:0,30,334	0/0:15,0:15:19.42:0,19,338	0/0:19,0:19:51.13:0,51,569	0/0:23,0:23:66.16:0,66,727	0/0:9,0:9:24.06:0,24,267	0/0:40,0:40:96.21:0,96,1055	0/0:22,0:22:66.18:0,66,736	0/0:20,0:20:57.15:0,57,635	0/0:13,0:13:33.09:0,33,368	1/1:0,19:19:45.15:714,45,0	0/0:18,0:18:48.11:0,48,535	0/0:22,0:22:63.17:0,63,701	0/0:31,0:31:81.19:0,81,893	0/0:23,0:23:63.14:0,63,693	0/0:26,0:26:69.10:0,69,737	0/0:19,0:19:48.13:0,48,534	0/0:26,0:26:72.19:0,72,803	0/0:16,0:16:48.13:0,48,535	0/0:33,0:33:90.22:0,90,992	0/0:11,0:11:33.09:0,33,368	0/0:9,0:9:24.06:0,24,267	0/0:19,0:19:54.15:0,54,602	0/0:13,0:13:36.09:0,36,401	0/0:15,0:16:39.03:0,39,419	0/0:27,0:27:81.20:0,81,894	0/0:10,0:10:21.04:0,21,234
chr10	108201494	.	CTCACAGTGTAGACACAT	C	2639.74	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=3.415;DP=991;FS=5.645;HRun=0;HaplotypeScore=393.0815;InbreedingCoeff=0.9382;MQ=62.10;MQ0=16;MQRankSum=2.227;QD=16.71;ReadPosRankSum=-1.438;VQSLOD=0.7169;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:99:0,105,2200	1/1:10,0:10:21.02:328,21,0	0/0:43,0:19:24.43:0,24,258	0/0:67,0:32:22.47:0,22,314	0/0:22,0:22:42.51:0,43,775	0/0:14,0:14:36.05:0,36,633	0/0:45,0:45:99:0,108,1635	1/1:32,0:17:5.98:46,6,0	0/0:43,0:43:99:0,117,2997	0/0:36,0:36:89.80:0,90,1610	0/0:10,0:10:24.50:0,24,350	0/0:70,0:70:99:0,168,4238	0/0:44,0:44:99:0,117,2574	0/0:41,0:41:99:0,99,2031	0/0:57,0:57:99:0,147,3269	0/0:57,0:57:99:0,147,3151	0/0:37,0:37:93.17:0,93,1975	0/0:24,0:24:66.19:0,66,1695	1/1:8,11:17:31.23:318,31,0	1/1:3,18:21:2.88:35,3,0	1/1:61,0:59:99:1569,129,0	0/0:39,0:38:75.11:0,75,1483	0/0:20,0:19:36.08:0,36,573	0/0:46,0:46:99:0,120,2976	0/0:24,0:24:66.18:0,66,1500	0/0:36,0:36:81.20:0,81,1737	1/1:15,0:15:41.97:520,42,0	0/0:15,0:15:41.99:0,42,811
chr10	108204108	.	T	TC	236.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.827;DP=664;FS=0.000;HRun=3;HaplotypeScore=67.8620;InbreedingCoeff=0.9925;MQ=87.34;MQ0=0;MQRankSum=-2.235;QD=19.72;ReadPosRankSum=0.344;VQSLOD=3.1568;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.27:0,90,1069	1/1:1,11:12:24.08:330,24,0	0/0:28,0:28:77.39:0,77,927	0/0:19,0:19:50.79:0,51,562	0/0:12,0:12:33.10:0,33,396	0/0:19,0:19:45.11:0,45,525	0/0:23,0:23:66.17:0,66,768	0/0:31,0:31:87.26:0,87,1035	0/0:23,0:23:66.20:0,66,791	0/0:12,0:12:30.06:0,30,331	0/0:14,0:14:42.03:0,42,473	0/0:38,0:38:99:0,99,1176	0/0:34,0:34:93.25:0,93,1091	0/0:20,0:20:57.16:0,57,674	0/0:25,0:25:75.23:0,75,899	0/0:24,0:24:72.22:0,72,864	0/0:31,0:31:87.27:0,87,1040	0/0:27,0:27:81.25:0,81,969	0/0:18,0:18:48.15:0,48,575	0/0:7,0:7:21.06:0,21,252	0/0:58,0:58:99:0,171,2032	0/0:13,0:13:36.11:0,36,431	0/0:10,0:10:30.09:0,30,360	0/0:42,0:42:99:0,117,1377	0/0:21,0:21:60.18:0,60,718	0/0:33,0:33:86.84:0,87,1007	0/0:23,0:23:69.19:0,69,807	0/0:15,0:15:45.12:0,45,527
chr10	108209700	.	CT	C	692.03	PASS	AB=0.729;AC=12;AF=0.214;AN=56;BaseQRankSum=3.244;DP=471;FS=1.214;HRun=14;HaplotypeScore=49.8256;InbreedingCoeff=0.7218;MQ=55.88;MQ0=6;MQRankSum=0.069;QD=6.18;ReadPosRankSum=-0.004;VQSLOD=1.8662;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:56.88:0,57,504	1/1:5,4:9:11.85:82,12,0	0/0:2,0:1:0:0,0,0	0/0:4,0:2:3:0,3,25	0/0:25,0:25:40.37:0,40,353	0/0:24,2:26:36.01:0,36,426	0/0:8,1:10:0.42:0,0,142	1/1:9,15:23:31.60:210,32,0	0/0:13,0:13:27.02:0,27,247	0/0:22,1:22:18.41:0,18,293	0/0:23,0:22:42.29:0,42,359	0/0:20,0:21:36.85:0,37,316	0/0:20,0:21:23.19:0,23,231	0/1:14,3:17:28.71:29,0,182	0/0:15,0:15:27.03:0,27,251	0/0:22,0:24:42:0,42,381	0/0:17,1:18:23.95:0,24,208	0/0:18,0:17:35.98:0,36,321	1/1:11,9:20:23.66:164,24,0	1/1:3,12:15:20.66:139,21,0	1/1:5,7:12:14.85:103,15,0	0/0:7,0:7:11.98:0,12,101	0/0:10,0:11:14.93:0,15,125	0/0:10,0:10:18.01:0,18,163	0/0:20,1:23:27.29:0,27,373	0/0:20,0:19:26.97:0,27,230	0/1:5,9:13:1.05:138,0,1	0/0:8,0:9:17.86:0,18,153
chr10	108210295	.	GA	G	2437.91	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.538;DP=580;FS=2.356;HRun=10;HaplotypeScore=66.0704;InbreedingCoeff=0.9863;MQ=80.71;MQ0=0;MQRankSum=-1.700;QD=17.79;ReadPosRankSum=-1.116;VQSLOD=4.0432;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.26:0,96,1062	1/1:1,7:8:14.99:130,15,0	0/0:15,0:16:18.86:0,19,223	0/0:17,0:16:27.42:0,27,308	0/0:24,0:24:48.12:0,48,524	0/0:23,0:27:77.58:0,78,787	0/0:20,0:21:53.98:0,54,575	1/1:11,25:36:74.95:651,75,0	0/0:19,0:20:59.92:0,60,601	0/0:32,0:32:87.19:0,87,925	0/0:19,0:19:42.09:0,42,449	1/1:1,11:12:26.99:234,27,0	0/0:12,2:14:10.04:0,10,339	0/0:18,0:18:51.14:0,51,564	0/0:20,1:21:22.07:0,22,471	0/0:19,0:19:54.15:0,54,597	0/0:23,0:23:66.13:0,66,708	0/0:24,0:24:54.15:0,54,597	1/1:4,13:17:41.98:364,42,0	1/1:6,20:26:56.98:495,57,0	1/1:3,16:20:50.01:423,50,0	0/0:22,1:23:37.10:0,37,629	0/0:15,0:16:42.08:0,42,440	0/0:16,0:16:42.11:0,42,465	0/0:19,0:19:54.14:0,54,591	0/0:21,0:21:51.14:0,51,564	1/1:3,15:18:38.98:338,39,0	0/0:17,0:18:47.96:0,48,512
chr10	108211253	.	C	CT	117.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.698;DP=622;FS=10.432;HRun=13;HaplotypeScore=78.7615;InbreedingCoeff=0.6724;MQ=75.82;MQ0=6;MQRankSum=-0.980;QD=9.06;ReadPosRankSum=-1.943;VQSLOD=1.5058;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:31:36.66:0,37,389	0/0:8,0:9:19.69:0,20,121	0/0:42,0:17:8.61:0,9,98	0/0:36,1:23:10.54:0,11,94	0/0:36,2:39:59.08:0,59,527	0/0:28,0:29:65.96:0,66,439	0/0:9,0:9:19.94:0,20,123	0/0:27,0:25:38.51:0,39,266	0/0:12,0:12:26.72:0,27,183	0/0:17,2:19:1.06:0,1,154	0/0:29,0:30:67.24:0,67,454	1/1:8,5:13:22.70:210,23,0	0/0:19,0:20:19.98:0,20,231	0/0:12,0:12:30.94:0,31,205	0/0:26,1:28:33.61:0,34,368	0/0:26,0:26:59.44:0,59,409	0/0:27,2:30:8.70:0,9,335	0/0:23,0:23:50.30:0,50,342	0/0:27,0:27:49.57:0,50,324	0/0:22,3:26:15.69:0,16,245	0/0:12,0:12:26:0,26,164	0/0:13,0:13:17:0,17,117	0/0:17,0:19:33.62:0,34,217	0/0:10,0:10:15.55:0,16,104	0/0:26,0:27:52.45:0,52,354	0/0:16,0:17:25.71:0,26,170	0/0:17,1:20:17.87:0,18,251	0/0:14,0:14:26.74:0,27,183
chr10	108211998	.	CCAGT	C	5337.57	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.611;DP=544;FS=5.879;HRun=0;HaplotypeScore=127.4941;InbreedingCoeff=0.9879;MQ=77.57;MQ0=0;MQRankSum=-14.378;QD=40.74;ReadPosRankSum=0.103;VQSLOD=4.5776;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:87.30:0,87,2252	1/1:1,9:10:27.08:477,27,0	0/0:13,0:13:36.11:0,36,863	0/0:15,0:15:42.10:0,42,994	0/0:14,0:14:39.12:0,39,963	0/0:15,0:15:39.13:0,39,1033	0/0:26,0:26:75.24:0,75,1956	1/1:7,12:19:45.57:739,46,0	0/0:11,0:11:33.11:0,33,894	0/0:13,0:13:36.12:0,36,986	0/0:7,0:7:21.07:0,21,566	1/1:1,25:26:72.25:1392,72,0	0/0:20,0:20:57.20:0,57,1561	0/0:26,0:26:75.26:0,75,2053	0/0:18,0:18:51.18:0,51,1397	0/0:19,0:19:54.19:0,54,1445	0/0:34,0:34:99:0,102,2794	0/0:34,0:34:96.80:0,97,2620	1/1:1,20:21:57.20:1102,57,0	1/1:2,11:13:27.09:521,27,0	1/1:5,16:21:8.98:135,9,0	0/0:15,0:15:45.15:0,45,1176	0/0:13,0:13:33.11:0,33,871	0/0:29,0:29:87.28:0,87,2284	0/0:21,0:21:60.21:0,60,1601	0/0:23,0:23:63.22:0,63,1724	1/1:3,18:21:54.14:972,54,0	0/0:13,0:13:36.12:0,36,967
chr10	108212002	.	T	TC	1440.97	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.608;DP=529;FS=8.600;HRun=1;HaplotypeScore=111.3477;InbreedingCoeff=0.9912;MQ=77.19;MQ0=0;MQRankSum=-14.635;QD=11.62;ReadPosRankSum=0.290;VQSLOD=1.3774;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.27:0,84,1086	1/1:9,0:9:22.11:152,22,0	0/0:13,0:13:36.07:0,36,438	0/0:15,0:15:41.63:0,42,526	0/0:15,0:15:36.10:0,36,450	0/0:13,0:13:36.12:0,36,467	0/0:25,0:25:75.23:0,75,959	1/1:14,3:17:43.54:366,44,0	0/0:13,0:13:39.11:0,39,490	0/0:13,0:13:36.12:0,36,468	0/0:7,0:7:21.07:0,21,273	1/1:26,0:26:66.27:316,66,0	0/0:19,0:19:57.19:0,57,740	0/0:26,0:26:78.25:0,78,1012	0/0:17,0:17:51.17:0,51,662	0/0:18,0:18:51.17:0,51,661	0/0:37,0:37:99:0,108,1385	0/0:33,0:33:96.29:0,96,1247	1/1:21,0:21:55.09:339,55,0	1/1:12,0:12:24.45:136,24,0	1/1:17,1:18:11.09:55,11,0	0/0:15,0:15:42.14:0,42,545	0/0:12,0:12:33.11:0,33,428	0/0:28,0:28:84.27:0,84,1091	0/0:21,0:21:57.17:0,57,726	0/0:21,0:21:63.20:0,63,818	1/1:21,0:21:47.36:273,47,0	0/0:13,0:13:36.12:0,36,465
chr10	108212031	.	GGCCC	G	4697.05	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.856;DP=466;FS=6.757;HRun=0;HaplotypeScore=117.7919;InbreedingCoeff=0.9843;MQ=66.59;MQ0=0;MQRankSum=-13.591;QD=49.97;ReadPosRankSum=0.593;VQSLOD=5.8682;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.27:0,78,2191	1/1:0,11:11:30.10:627,30,0	0/0:5,0:5:14.20:0,14,274	0/0:7,0:7:10.78:0,11,288	0/0:10,0:10:30.10:0,30,832	0/0:16,0:16:48.16:0,48,1379	0/0:33,0:33:99:0,99,2869	1/1:0,15:15:39.10:816,39,0	0/0:13,0:13:39.13:0,39,1102	0/0:14,0:14:39.13:0,39,1023	0/0:7,0:7:21.04:0,21,481	1/1:0,13:13:36.12:753,36,0	0/0:23,0:23:69.19:0,69,1919	0/0:20,0:20:60.21:0,60,1705	0/0:16,0:16:48.16:0,48,1391	0/0:15,0:15:45.15:0,45,1305	0/0:40,0:40:99:0,120,3324	0/0:35,0:35:99:0,102,2956	1/1:1,15:16:45.10:894,45,0	1/1:0,12:12:21.07:361,21,0	1/1:2,8:10:15.05:263,15,0	0/0:13,0:13:34.35:0,34,849	0/0:9,0:9:27.08:0,27,716	0/0:28,0:28:84.29:0,84,2405	0/0:11,0:11:33.11:0,33,937	0/0:18,0:18:54.19:0,54,1444	1/1:0,17:17:48.16:982,48,0	0/0:12,0:12:36.12:0,36,1040
chr10	108216920	.	T	TAC	620.56	PASS	AB=0.936;AC=14;AF=0.292;AN=48;BaseQRankSum=-1.030;DP=608;FS=0.000;HRun=0;HaplotypeScore=98.7385;InbreedingCoeff=0.1569;MQ=70.94;MQ0=7;MQRankSum=-1.066;QD=2.72;ReadPosRankSum=-0.464;VQSLOD=1.8036;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:30:8.26:9,0,8	1/1:8,6:15:2.95:36,3,0	./.	./.	0/0:19,0:19:30.04:0,30,303	0/0:16,0:16:5.99:0,6,55	0/0:24,0:29:17.70:0,18,157	0/0:19,0:19:2.98:0,3,22	0/1:21,1:23:78.69:97,0,79	0/0:24,0:24:0.72:0,1,1	0/0:15,0:15:5.67:0,6,35	1/1:30,0:28:2.75:25,3,0	0/1:17,0:18:34.87:35,0,37	0/0:19,0:18:3:0,3,32	0/1:16,1:17:23.26:23,0,159	0/0:28,0:29:26.88:0,27,264	0/1:30,0:31:5.43:5,0,244	0/0:19,0:19:3.79:0,4,121	./.	1/1:7,1:8:8.84:112,9,0	1/1:22,11:35:11.78:177,12,0	0/0:12,0:12:3:0,3,32	0/0:16,0:16:6.02:0,6,64	0/0:37,0:37:36.08:0,36,385	0/0:14,0:14:3:0,3,32	./.	0/1:14,5:20:11.17:242,0,11	0/0:11,0:12:7.81:0,8,56
chr10	108217038	.	CTGTG	C	4674.11	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.132;DP=578;FS=7.111;HRun=0;HaplotypeScore=96.3144;InbreedingCoeff=0.9943;MQ=84.29;MQ0=0;MQRankSum=-5.528;QD=44.94;ReadPosRankSum=0.382;VQSLOD=4.9332;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,2882	1/1:2,12:14:30.10:560,30,0	0/0:19,0:19:47.75:0,48,1170	0/0:21,0:20:16.55:0,17,809	0/0:19,0:19:48.16:0,48,1274	0/0:25,0:25:72.23:0,72,1833	0/0:24,0:24:72.25:0,72,1880	1/1:3,14:17:45.14:792,45,0	0/0:21,0:21:60.21:0,60,1556	0/0:15,0:15:39.13:0,39,1036	0/0:6,0:6:15.05:0,15,400	0/0:27,0:27:75.26:0,75,1960	0/0:19,0:19:54.17:0,54,1383	0/0:24,0:24:66.23:0,66,1754	0/0:19,0:19:48.16:0,48,1273	0/0:22,0:22:66.23:0,66,1681	0/0:38,0:38:99:0,111,2882	0/0:16,0:16:45.15:0,45,1187	1/1:1,17:18:48.16:851,48,0	1/1:0,11:11:33.11:613,33,0	1/1:2,23:25:51.17:912,51,0	0/0:22,0:22:63.22:0,63,1659	0/0:20,0:20:51.18:0,51,1329	0/0:18,0:18:54.14:0,54,1349	0/0:16,0:16:42.14:0,42,1082	0/0:27,0:27:81.28:0,81,2116	1/1:0,19:19:51.17:947,51,0	0/0:15,0:15:42.14:0,42,1110
chr10	108218638	.	G	GC	3951.11	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-10.800;DP=607;FS=2.840;HRun=7;HaplotypeScore=60.9888;InbreedingCoeff=0.9946;MQ=84.92;MQ0=0;MQRankSum=-0.696;QD=28.63;ReadPosRankSum=-0.314;VQSLOD=4.2078;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:84.10:0,84,804	1/1:2,7:9:24.04:275,24,0	0/0:20,0:20:45.06:0,45,432	0/0:25,0:25:54.54:0,55,517	0/0:20,0:20:57.09:0,57,550	0/0:19,0:19:54.09:0,54,521	0/0:25,0:25:57.07:0,57,550	1/1:1,24:25:69.21:833,69,0	0/0:21,0:21:57.09:0,57,550	0/0:22,0:22:48.07:0,48,463	0/0:12,0:12:36.06:0,36,347	0/0:33,0:33:99:0,99,956	0/0:16,0:16:48.03:0,48,454	0/0:20,0:20:54.09:0,54,521	0/0:21,0:21:60.08:0,60,574	0/0:24,0:24:51.07:0,51,492	0/0:33,0:33:96.15:0,96,927	0/0:19,0:19:48.02:0,48,454	1/1:5,16:21:48.13:566,48,0	1/1:2,18:20:48.15:580,48,0	1/1:5,27:32:69.21:831,69,0	0/0:17,0:17:45.06:0,45,434	0/0:7,0:7:15.02:0,15,145	0/0:39,0:39:99:0,99,956	0/0:17,0:17:36.02:0,36,340	0/0:13,0:13:33.05:0,33,319	1/1:6,24:31:72.22:867,72,0	0/0:8,0:8:18.02:0,18,174
chr10	108219794	.	ATCTC	A	6489.86	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.075;DP=707;FS=8.464;HRun=0;HaplotypeScore=118.4484;InbreedingCoeff=0.9993;MQ=64.00;MQ0=0;MQRankSum=-3.159;QD=44.76;ReadPosRankSum=-0.808;VQSLOD=4.6923;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:71.01:0,71,1990	1/1:0,9:9:27.09:519,27,0	0/0:30,0:24:48.71:0,49,1089	0/0:25,0:16:26.17:0,26,570	0/0:22,0:22:63.17:0,63,1533	0/0:27,0:27:78.24:0,78,1986	0/0:20,0:20:57.13:0,57,1222	1/1:2,21:22:57.10:824,57,0	0/0:24,0:24:69.20:0,69,1598	0/0:43,0:43:99:0,129,3369	0/0:20,0:20:60.21:0,60,1621	0/0:36,0:36:99:0,105,2496	0/0:27,0:27:78.24:0,78,1916	0/0:18,0:18:51.16:0,51,1340	0/0:27,0:27:81.25:0,81,2056	0/0:25,0:25:75.26:0,75,2029	0/0:27,0:27:77.59:0,78,1865	0/0:28,0:28:84.24:0,84,2097	1/1:0,32:31:93.20:1490,93,0	1/1:0,26:26:75.06:1245,75,0	1/1:0,20:20:48.12:861,48,0	0/0:26,0:26:78.23:0,78,1930	0/0:16,0:16:48.12:0,48,1115	0/0:34,0:34:96.30:0,96,2417	0/0:16,0:16:42.14:0,42,1057	0/0:30,0:30:87.27:0,87,2131	1/1:2,33:35:81.28:1551,81,0	0/0:9,0:9:27.09:0,27,739
chr10	108222178	.	T	TAGAC	7835.61	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-14.870;DP=821;FS=1.191;HRun=0;HaplotypeScore=127.7754;InbreedingCoeff=0.9999;MQ=74.15;MQ0=0;MQRankSum=0.413;QD=41.68;ReadPosRankSum=-1.438;VQSLOD=4.7480;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,125,1978	1/1:4,12:17:32.86:824,33,0	0/0:33,0:32:56.71:0,57,834	0/0:31,0:31:75.25:0,75,1226	0/0:22,0:22:60.19:0,60,991	0/0:15,0:15:42.13:0,42,682	0/0:23,0:23:63.22:0,63,1068	1/1:14,24:40:81.19:1480,81,0	0/0:22,0:22:66.23:0,66,1115	0/0:30,0:30:81.26:0,81,1316	0/0:23,0:23:54.14:0,54,838	0/0:46,0:46:99:0,117,1919	0/0:26,0:26:69.18:0,69,1108	0/0:27,0:27:72.23:0,72,1187	0/0:46,0:46:99:0,111,1847	0/0:40,0:40:90.26:0,90,1412	0/0:33,0:33:87.28:0,87,1442	0/0:18,0:18:48.11:0,48,748	1/1:7,21:31:69.15:1278,69,0	1/1:7,23:30:57.20:1418,57,0	1/1:9,21:31:42.14:1049,42,0	0/0:28,0:28:54.17:0,54,886	0/0:19,0:19:45.14:0,45,732	0/0:29,0:29:81.26:0,81,1341	0/0:28,0:28:78.23:0,78,1225	0/0:30,0:30:63.21:0,63,1040	1/1:11,26:37:72.25:1788,72,0	0/0:15,0:15:39.13:0,39,643
chr10	108224426	.	CG	C	3216.43	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=4.086;DP=518;FS=9.519;HRun=3;HaplotypeScore=65.8901;InbreedingCoeff=0.9812;MQ=75.64;MQ0=14;MQRankSum=-0.486;QD=25.33;ReadPosRankSum=-0.874;VQSLOD=1.8533;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:63.16:0,63,865	1/1:3,2:5:15.03:159,15,0	0/0:22,0:18:47.94:0,48,477	0/0:20,0:13:7.37:0,7,165	0/0:27,0:27:72.63:0,73,918	0/0:12,0:12:33.10:0,33,455	0/0:13,0:13:29.95:0,30,349	1/1:2,19:20:59.81:590,60,0	0/0:15,0:14:39.12:0,39,541	0/0:22,0:21:63.17:0,63,823	0/0:13,0:13:24.07:0,24,327	1/1:2,13:15:26.75:334,27,0	0/0:12,0:11:33.10:0,33,454	0/0:12,0:12:33.08:0,33,421	0/0:17,0:17:45.14:0,45,629	0/0:17,0:17:42.08:0,42,529	0/0:32,0:32:93.20:0,93,1238	0/0:10,0:10:27.06:0,27,365	1/1:8,7:15:44.99:463,45,0	1/1:3,29:32:78.08:894,78,0	1/1:7,6:12:26.94:276,27,0	0/0:19,0:19:44.32:0,44,548	0/0:17,0:15:42.07:0,42,542	0/0:19,0:18:42.05:0,42,481	0/0:24,0:24:54.08:0,54,697	0/0:21,0:20:57.05:0,57,680	1/1:2,24:26:57.18:699,57,0	0/0:19,0:17:48.10:0,48,642
chr10	108226337	.	TCACCAC	T	105.01	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.051;DP=447;FS=0.000;HRun=0;HaplotypeScore=93.2550;InbreedingCoeff=0.5963;MQ=74.58;MQ0=7;MQRankSum=-3.594;QD=1.57;ReadPosRankSum=-1.252;VQSLOD=1.5910;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:17.46:0,17,220	0/0:3,0:3:3.01:0,3,98	1/1:39,0:24:2.49:9,2,0	0/0:32,0:17:8.55:0,9,107	0/0:9,0:9:18.06:0,18,495	0/0:8,0:8:18.02:0,18,323	0/0:14,0:14:30.09:0,30,711	0/0:19,0:19:10.38:0,10,184	0/0:20,0:20:45.14:0,45,1229	0/0:13,0:13:18.94:0,19,521	0/0:14,0:14:24.08:0,24,666	0/0:14,0:14:26.56:0,27,518	0/0:20,0:20:42.14:0,42,1173	0/0:21,0:21:47.99:0,48,1238	0/0:20,0:20:35.47:0,35,961	0/0:14,0:15:30.03:0,30,784	0/0:13,0:13:15.87:0,16,185	0/0:7,0:12:6.02:0,6,136	0/0:8,0:8:12.01:0,12,303	0/0:9,0:9:12.04:0,12,307	0/0:38,0:38:66.57:0,67,1781	0/0:11,0:11:21.52:0,22,418	0/0:4,0:4:9.03:0,9,244	1/1:10,18:28:9.03:187,9,0	0/0:9,0:9:18.05:0,18,468	0/0:15,0:15:21.07:0,21,523	0/0:18,0:19:48.10:0,48,1340	0/0:2,0:2:5.99:0,6,50
chr10	108228626	.	CCTAT	C	426.67	PASS	AB=0.981;AC=10;AF=0.200;AN=50;BaseQRankSum=3.530;DP=684;FS=2.918;HRun=0;HaplotypeScore=127.8663;InbreedingCoeff=0.2043;MQ=64.65;MQ0=14;MQRankSum=1.093;QD=2.31;ReadPosRankSum=0.957;VQSLOD=2.3293;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:28:66.52:86,0,67	1/1:9,3:12:6.02:90,6,0	./.	./.	0/0:35,0:35:45.13:0,45,789	0/0:17,0:17:18.06:0,18,322	0/0:10,0:10:15.05:0,15,269	0/0:26,0:25:5.93:0,6,39	0/0:29,0:29:42.12:0,42,755	0/1:32,3:34:41.90:42,0,673	0/0:26,0:25:39.13:0,39,710	0/0:35,0:35:44.81:0,45,409	0/1:15,0:15:31.05:31,0,198	0/0:16,0:16:33.09:0,33,554	0/0:41,0:41:27.55:0,28,1214	0/0:32,0:32:46.43:0,46,1077	0/1:26,0:23:36.77:52,0,37	0/1:16,0:14:2.42:2,0,119	0/0:22,0:22:33.06:0,33,460	0/0:37,0:37:27.06:0,27,396	0/0:12,0:12:3.01:0,3,51	0/0:36,0:36:51.17:0,51,919	./.	1/1:12,6:15:20.72:258,21,0	0/0:18,0:18:27.04:0,27,454	0/1:29,1:29:3.38:3,0,631	0/0:26,0:26:27.09:0,27,443	0/0:10,0:10:6.02:0,6,113
chr10	108228674	.	TCTAG	T	559.46	PASS	AB=0.902;AC=10;AF=0.179;AN=56;BaseQRankSum=9.415;DP=649;FS=1.903;HRun=0;HaplotypeScore=116.0338;InbreedingCoeff=0.2465;MQ=59.67;MQ0=59;MQRankSum=-2.966;QD=2.65;ReadPosRankSum=-1.465;VQSLOD=2.3145;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,3:19:14.43:254,0,14	1/1:8,0:8:8.83:62,9,0	1/1:37,0:3:2.51:6,3,0	0/1:53,0:11:0.23:0,0,0	0/0:30,0:30:81.04:0,81,1083	0/0:17,0:16:48:0,48,546	0/0:18,0:18:45.03:0,45,477	0/1:31,0:27:5.93:147,0,6	0/0:24,0:24:66.07:0,66,962	0/0:27,0:23:28.89:0,29,839	0/0:30,0:30:78.11:0,78,1054	0/0:31,0:31:87.08:0,87,1076	0/0:14,0:14:17.85:0,18,434	0/0:16,0:16:45.04:0,45,602	0/0:30,0:30:67.43:0,67,1220	0/0:32,0:32:95.51:0,96,1264	0/1:8,10:13:56.83:101,0,57	0/1:13,2:12:57.07:64,0,57	0/0:11,0:10:26.82:0,27,327	0/0:20,0:20:21.04:0,21,273	0/0:11,0:11:2.98:0,3,43	0/0:25,0:25:71.96:0,72,1048	0/0:32,0:31:50.03:0,50,400	0/1:26,0:23:58.72:59,0,276	0/0:19,0:19:45.03:0,45,569	0/0:27,0:26:39.56:0,40,842	0/0:17,0:16:0.82:0,1,324	0/0:7,0:7:15.01:0,15,165
chr10	108228682	.	TCTAG	T	1046.16	PASS	AB=0.974;AC=8;AF=0.143;AN=56;BaseQRankSum=9.147;DP=675;FS=0.000;HRun=0;HaplotypeScore=119.9450;InbreedingCoeff=0.4420;MQ=67.90;MQ0=59;MQRankSum=-6.135;QD=7.53;ReadPosRankSum=-3.766;VQSLOD=1.2813;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:14:6.49:6,0,157	1/1:8,1:9:8.97:99,9,0	0/1:42,0:7:0.86:1,0,54	0/0:67,0:21:13.95:0,14,140	0/0:28,0:28:78:0,78,1751	0/0:19,0:18:51.14:0,51,1137	0/0:21,0:21:48.14:0,48,1011	1/1:3,32:32:32.69:993,33,0	0/0:22,0:22:66.20:0,66,1439	0/0:29,0:25:72.22:0,72,1500	0/0:29,0:29:78.25:0,78,1737	0/0:33,0:33:93.29:0,93,1989	0/0:19,0:19:57.12:0,57,1127	0/0:16,0:16:48.14:0,48,1026	0/0:28,0:28:81.25:0,81,1659	0/0:37,0:37:99:0,108,2265	0/1:18,0:13:0.62:1,0,186	0/0:14,0:11:24:0,24,330	0/0:12,0:11:8.50:0,9,342	0/0:17,0:17:21.04:0,21,304	0/0:10,3:13:2.98:0,3,47	0/0:23,0:23:60.21:0,60,1352	0/0:31,0:30:54.17:0,54,1240	0/0:27,0:24:60.18:0,60,1208	0/0:19,0:19:48.16:0,48,1041	0/0:25,0:25:48.69:0,49,1582	0/1:15,2:16:72.98:73,0,375	0/0:7,0:7:15.05:0,15,325
chr10	108228698	.	TCTAG	T	351.99	PASS	AB=0.861;AC=7;AF=0.125;AN=56;BaseQRankSum=9.121;DP=709;FS=0.000;HRun=0;HaplotypeScore=138.8296;InbreedingCoeff=0.2632;MQ=82.77;MQ0=41;MQRankSum=-4.089;QD=1.90;ReadPosRankSum=-2.051;VQSLOD=1.8750;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:11:15.04:0,15,278	1/1:11,1:12:6.65:71,7,0	0/0:49,0:16:16.64:0,17,281	0/1:81,0:47:42.82:43,0,343	0/0:28,0:27:78.25:0,78,1816	0/0:21,0:21:63.20:0,63,1439	0/0:19,0:19:45.15:0,45,1057	0/1:40,0:38:56.28:56,0,414	0/0:21,0:21:63.18:0,63,1445	0/0:30,0:27:78.26:0,78,1756	0/0:28,0:28:78.25:0,78,1815	0/0:32,0:31:87.28:0,87,2094	0/0:23,0:23:66.21:0,66,1455	0/0:17,0:17:51.16:0,51,1149	0/0:32,0:32:96.26:0,96,1963	0/0:37,0:37:99:0,102,2292	0/0:8,0:5:8.98:0,9,159	0/0:12,0:9:18.03:0,18,282	0/1:14,1:12:67.80:126,0,68	0/0:2,12:13:0.47:0,0,1	0/1:5,8:13:0:0,0,0	0/0:24,0:24:66.18:0,66,1386	0/0:31,0:30:72.25:0,72,1715	0/0:27,0:25:63.21:0,63,1564	0/0:21,0:21:57.20:0,57,1276	0/0:26,0:26:75.20:0,75,1549	0/1:13,5:17:48.46:177,0,48	0/0:8,0:8:21.07:0,21,463
chr10	108228722	.	GCTAT	G	367.78	PASS	AB=0.850;AC=7;AF=0.125;AN=56;BaseQRankSum=7.617;DP=681;FS=0.000;HRun=0;HaplotypeScore=135.5570;InbreedingCoeff=0.2075;MQ=88.69;MQ0=34;MQRankSum=-4.993;QD=3.47;ReadPosRankSum=-3.126;VQSLOD=1.6945;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:9:2.96:0,3,25	0/1:4,7:10:38.55:50,0,39	0/0:39,0:18:22.25:0,22,212	0/0:74,0:51:60.64:0,61,481	0/0:25,0:24:69.22:0,69,1374	0/0:24,0:24:66:0,66,1245	0/0:25,0:25:51.16:0,51,846	1/1:29,0:21:23.40:152,23,0	0/0:22,0:22:63.15:0,63,1228	0/0:32,0:31:93.32:0,93,1896	0/0:30,0:30:81.23:0,81,1602	0/0:39,0:38:99:0,114,2033	0/0:28,0:28:75.26:0,75,1524	0/0:17,0:17:51.15:0,51,974	0/0:28,0:28:84.25:0,84,1722	0/0:31,0:31:87.28:0,87,1691	0/0:10,0:10:3.26:0,3,42	0/1:7,0:6:1.45:1,0,18	0/1:20,7:17:99:196,0,137	0/1:9,2:10:29.75:30,0,38	0/0:14,0:14:0:0,0,0	0/0:19,0:19:54.19:0,54,1169	0/0:30,0:30:90.18:0,90,1689	0/0:28,0:28:72.10:0,72,1239	0/0:23,0:23:66.23:0,66,1393	0/0:18,0:18:51.17:0,51,998	0/1:21,0:20:66.96:67,0,220	0/0:9,0:9:24.08:0,24,534
chr10	108229352	.	GC	G	1935.04	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=1.319;DP=390;FS=6.644;HRun=1;HaplotypeScore=205.5576;InbreedingCoeff=0.0643;MQ=60.97;MQ0=0;MQRankSum=-7.293;QD=5.24;ReadPosRankSum=9.727;VQSLOD=-0.3335;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:12.08:30,12,0	1/1:1,5:6:11.93:89,12,0	0/1:12,0:12:6.42:6,0,203	0/0:10,0:10:22.33:0,22,161	0/1:28,0:28:36.09:58,0,36	0/1:25,0:25:8.78:44,0,9	0/0:9,0:9:4.37:0,4,52	1/1:1,21:22:65.77:517,66,0	0/1:10,0:10:9.91:10,0,43	0/1:20,0:19:12.50:13,0,46	0/1:13,0:13:25.43:30,0,25	0/1:27,0:27:35.16:45,0,35	1/1:13,0:13:11.75:40,12,0	0/1:15,0:15:14.43:28,0,14	0/1:22,0:22:3.81:46,0,4	1/1:15,0:15:22.87:59,23,0	1/1:6,0:6:9.70:28,10,0	1/1:10,0:10:9.08:22,9,0	1/1:0,11:11:32.89:257,33,0	1/1:0,12:12:32.30:229,32,0	1/1:0,8:8:17.37:127,17,0	1/1:11,0:11:3.38:27,3,0	1/1:12,0:12:4.96:40,5,0	0/0:2,0:2:0:0,0,0	1/1:14,0:14:20.59:55,21,0	0/1:18,0:18:6.05:6,0,50	1/1:0,12:12:32.82:246,33,0	1/1:18,0:18:15.56:42,16,0
chr10	108229353	.	CA	C	5549.16	PASS	AB=0.955;AC=52;AF=0.929;AN=56;BaseQRankSum=-0.341;DP=387;FS=6.961;HRun=1;HaplotypeScore=191.5107;InbreedingCoeff=0.2833;MQ=59.94;MQ0=0;MQRankSum=-2.647;QD=14.41;ReadPosRankSum=5.989;VQSLOD=4.5586;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:23.87:175,24,0	1/1:6,0:6:7.27:21,7,0	1/1:8,3:11:3.38:89,3,0	0/1:9,1:10:3.36:3,0,56	1/1:28,0:28:44.82:433,45,0	1/1:25,0:25:57.55:429,58,0	1/1:8,0:8:11.76:80,12,0	1/1:22,0:22:39.97:112,40,0	1/1:11,0:11:2.93:131,3,0	1/1:20,0:19:27.25:316,27,0	1/1:13,0:13:15.87:225,16,0	1/1:26,0:26:47.61:460,48,0	1/1:13,0:13:29.82:225,30,0	1/1:15,0:15:30.02:255,30,0	1/1:23,0:23:41.41:410,41,0	1/1:15,0:15:44.74:329,45,0	1/1:6,0:6:14.92:116,15,0	1/1:10,0:10:29.79:214,30,0	1/1:11,0:11:19.99:56,20,0	1/1:12,0:12:19.96:57,20,0	0/1:8,0:8:9.17:11,0,9	1/1:11,0:11:29.82:218,30,0	1/1:11,0:11:26.86:200,27,0	0/0:2,0:2:0:0,0,0	1/1:14,0:14:35.81:270,36,0	1/1:17,0:17:27.60:296,28,0	1/1:12,0:12:18.17:52,18,0	1/1:18,0:18:50.63:364,51,0
chr10	108229421	.	A	AAT	4020.36	PASS	AC=18;AF=0.333;AN=54;BaseQRankSum=-8.596;DP=293;FS=2.522;HRun=0;HaplotypeScore=48.5077;InbreedingCoeff=0.8376;MQ=66.33;MQ0=2;MQRankSum=0.806;QD=35.27;ReadPosRankSum=-0.550;VQSLOD=5.2241;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:6:18.06:304,18,0	1/1:2,2:4:6.02:101,6,0	./.	0/0:16,0:10:8.69:0,9,100	0/0:16,0:16:33.11:0,33,425	0/0:16,0:16:36.07:0,36,438	0/0:5,0:5:12.04:0,12,154	1/1:11,34:45:99:1618,99,0	0/0:6,0:6:15.05:0,15,191	0/0:13,0:12:30.10:0,30,384	0/0:5,0:5:15.05:0,15,192	0/0:11,0:11:18.02:0,18,214	0/0:11,0:11:18.02:0,18,214	0/0:3,0:3:9.02:0,9,102	0/0:13,0:12:33.11:0,33,421	0/0:10,0:9:24.08:0,24,302	1/1:0,10:11:27.09:455,27,0	1/1:2,9:11:27.09:440,27,0	1/1:5,6:11:24.08:393,24,0	1/1:2,5:7:18.06:278,18,0	1/1:0,5:5:12.04:202,12,0	0/0:2,0:2:6.02:0,6,76	0/0:1,0:1:3.01:0,3,39	0/0:1,0:1:3.01:0,3,39	0/0:16,0:16:42.10:0,42,523	0/0:15,0:15:1.15:0,1,424	1/1:5,6:12:15.04:229,15,0	0/0:12,0:12:30.10:0,30,385
chr10	108229613	.	T	TATACATAC	4356.82	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=3.788;DP=574;FS=0.554;HRun=0;HaplotypeScore=156.7200;InbreedingCoeff=0.8745;MQ=55.32;MQ0=8;MQRankSum=-8.692;QD=19.54;ReadPosRankSum=-4.998;VQSLOD=2.6904;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:6.02:157,6,0	1/1:6,0:9:6.02:159,6,0	0/0:24,0:15:5.99:0,6,94	0/0:19,0:14:3:0,3,28	0/0:25,0:25:48.16:0,48,1178	0/0:23,0:23:45.13:0,45,1046	0/0:17,0:17:24.07:0,24,547	1/1:55,0:55:66.12:1354,66,0	0/0:14,0:14:30.09:0,30,694	0/0:15,0:15:27.09:0,27,627	0/0:16,0:16:27.08:0,27,593	1/1:12,11:27:33.11:1316,33,0	0/0:20,0:20:42.14:0,42,1014	0/0:18,0:18:42.13:0,42,997	0/0:25,0:25:66.21:0,66,1595	0/0:19,0:19:51.18:0,51,1272	1/1:16,0:19:14.84:205,15,0	1/1:14,0:14:9.03:197,9,0	1/1:22,0:21:6.02:118,6,0	1/1:10,0:15:9.03:246,9,0	1/1:11,0:15:15.03:292,15,0	0/0:16,0:16:36.11:0,36,833	0/0:13,0:13:12:0,12,197	0/0:19,0:19:33.11:0,33,793	0/0:25,0:25:57.18:0,57,1308	0/0:21,0:21:36.12:0,36,867	1/1:12,0:17:9.03:312,9,0	0/0:22,0:21:39.13:0,39,814
chr10	108230416	.	TTC	T	740.21	PASS	AB=0.983;AC=26;AF=0.500;AN=52;BaseQRankSum=1.937;DP=602;FS=4.856;HRun=0;HaplotypeScore=107.7324;InbreedingCoeff=-0.1013;MQ=59.45;MQ0=19;MQRankSum=1.657;QD=1.77;ReadPosRankSum=1.273;VQSLOD=1.5068;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:32:11.99:0,12,100	0/0:9,0:9:8.98:0,9,73	./.	./.	0/1:23,0:23:2.67:3,0,114	0/1:35,0:36:57.55:58,0,126	0/0:20,0:19:20.88:0,21,160	0/1:29,0:28:8.15:8,0,26	0/1:23,0:23:30.28:54,0,30	0/1:14,2:16:29.22:29,0,73	0/1:23,0:22:33.78:76,0,34	0/1:27,0:27:14.08:14,0,43	0/1:16,0:16:28.51:29,0,48	0/1:16,0:16:2.67:3,0,110	0/1:26,0:25:34.10:34,0,121	0/1:23,0:23:40.54:41,0,115	0/0:26,0:24:12.72:0,13,81	0/0:21,0:19:22.74:0,23,172	1/1:19,0:16:18.34:134,18,0	1/1:16,0:17:12.38:90,12,0	1/1:10,0:10:5.85:37,6,0	0/1:26,0:26:9.60:10,0,73	0/1:14,0:13:15.98:17,0,16	0/0:37,0:33:2.01:0,2,109	1/1:10,4:13:2.87:16,3,0	0/1:26,0:26:36.07:36,0,137	1/1:24,0:23:17.05:122,17,0	1/1:9,0:8:11.96:94,12,0
chr10	108230455	.	TCACACACACACA	T	526.40	PASS	AB=1.000;AC=5;AF=0.096;AN=52;BaseQRankSum=4.825;DP=494;FS=8.077;HRun=0;HaplotypeScore=171.5657;InbreedingCoeff=0.5407;MQ=43.91;MQ0=31;MQRankSum=-4.599;QD=8.92;ReadPosRankSum=-1.281;VQSLOD=1.5908;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,3:27:2.97:0,3,20	0/0:10,0:10:8.60:0,9,408	./.	./.	0/0:25,0:24:24.07:0,24,909	0/0:36,0:34:31.20:0,31,1395	0/1:27,0:23:1:1,0,595	0/0:21,0:20:23.86:0,24,698	0/0:22,0:20:16.94:0,17,627	0/0:18,0:18:39.13:0,39,1434	0/0:20,0:20:14.72:0,15,633	0/0:17,0:16:19.62:0,20,788	0/0:17,0:16:24.08:0,24,845	0/0:17,0:16:18.53:0,19,706	0/0:24,0:22:12.04:0,12,542	0/0:16,0:16:12.04:0,12,421	1/1:10,2:14:15.05:443,15,0	1/1:16,0:13:6.02:188,6,0	0/0:18,0:16:24.08:0,24,993	0/0:16,0:15:6.02:0,6,317	0/0:7,0:6:0.47:0,0,1	0/0:20,0:20:13.93:0,14,488	0/0:15,0:11:15.05:0,15,623	0/0:37,0:32:30.57:0,31,1277	0/0:12,0:11:6.02:0,6,193	0/0:19,0:19:45.15:0,45,1691	0/0:12,0:11:6.59:0,7,232	0/0:5,0:5:3.01:0,3,51
chr10	108234143	.	G	GCACACACACA	2293.49	PASS	AB=0.870;AC=13;AF=0.232;AN=56;BaseQRankSum=2.358;DP=687;FS=11.900;HRun=0;HaplotypeScore=205.4444;InbreedingCoeff=0.6709;MQ=64.96;MQ0=9;MQRankSum=-2.892;QD=12.81;ReadPosRankSum=-6.706;VQSLOD=-0.7196;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:98.10:98,0,353	1/1:0,0:8:9.03:190,9,0	0/0:25,0:13:5.02:0,5,398	0/0:30,0:18:41.83:0,42,612	0/0:18,0:18:45.11:0,45,1016	0/0:20,0:19:47.59:0,48,1131	0/0:41,0:40:99:0,102,2119	1/1:23,0:21:20.82:482,21,0	0/0:22,0:21:48.10:0,48,1019	0/0:27,0:27:72.18:0,72,1462	0/0:15,0:15:36.10:0,36,806	0/0:40,0:40:99:0,104,1981	0/0:30,0:30:80.42:0,80,1595	0/0:20,0:20:48.12:0,48,1279	0/0:38,0:38:99:0,105,2613	0/0:24,0:24:66.12:0,66,1664	0/0:18,0:18:23.84:0,24,232	0/1:9,0:9:93.36:93,0,209	1/1:24,0:24:39.85:646,40,0	1/1:8,5:18:8.90:394,9,0	1/1:40,0:40:26.73:323,27,0	0/0:25,0:25:64.38:0,64,1561	0/0:21,0:21:51.05:0,51,952	0/0:37,0:37:78.09:0,78,1741	0/0:16,0:15:38.33:0,38,866	0/0:29,0:29:84.04:0,84,1600	0/1:9,1:25:7.05:246,0,7	0/0:12,0:12:30:0,30,605
chr10	108236079	.	CACA	C	3422.76	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.675;DP=843;FS=5.272;HRun=0;HaplotypeScore=115.8587;InbreedingCoeff=0.9623;MQ=63.24;MQ0=6;MQRankSum=2.163;QD=19.78;ReadPosRankSum=0.608;VQSLOD=3.3050;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,129,2418	1/1:3,8:11:3.74:263,4,0	0/0:36,0:23:15.05:0,15,286	0/0:48,0:38:38.82:0,39,593	0/0:23,0:23:54.11:0,54,938	0/0:29,0:29:60.21:0,60,1160	0/0:31,0:31:63.22:0,63,1217	1/1:18,18:35:51.15:653,51,0	0/0:36,0:36:72.22:0,72,1351	0/0:29,0:29:48.24:0,48,1007	0/0:23,0:23:54.62:0,55,969	0/0:38,0:38:90.28:0,90,1662	0/0:39,0:39:99:0,99,1875	0/0:28,0:28:54.17:0,54,1023	0/0:46,0:46:99:0,108,1977	0/0:27,0:27:60.15:0,60,1073	0/0:31,0:31:66.23:0,66,1246	0/0:18,0:18:36.08:0,36,663	1/1:18,8:25:16.76:298,17,0	1/1:5,15:20:42.02:505,42,0	1/1:13,29:42:54.18:738,54,0	0/0:22,0:22:36.03:0,36,557	0/0:22,0:21:45.11:0,45,842	0/0:27,0:27:63.22:0,63,1189	0/0:20,0:20:48.15:0,48,877	0/0:32,0:32:69.18:0,69,1199	1/1:9,29:38:72.13:966,72,0	0/0:13,0:13:39.13:0,39,740
chr10	108236182	.	GCACACACACACACACACACACA	G	4905.76	PASS	AB=0.832;AC=13;AF=0.232;AN=56;BaseQRankSum=4.912;DP=596;FS=9.608;HRun=0;HaplotypeScore=308.1358;InbreedingCoeff=0.6188;MQ=59.62;MQ0=8;MQRankSum=-3.430;QD=27.87;ReadPosRankSum=-0.978;VQSLOD=2.0355;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:32:20.58:0,21,380	1/1:6,2:8:12.04:444,12,0	0/0:34,0:20:9.03:0,9,122	0/0:31,0:23:9.03:0,9,150	0/0:7,0:11:12:0,12,319	0/0:21,0:27:39.11:0,39,1342	0/0:20,0:20:27.09:0,27,769	0/1:26,13:39:10.09:494,0,10	0/0:17,0:18:36.12:0,36,2072	0/0:17,0:18:33.10:0,33,1294	0/0:10,0:18:23.74:0,24,1289	0/0:22,0:22:36.11:0,36,2197	0/0:11,0:12:21.07:0,21,1222	0/0:18,0:18:27.09:0,27,1836	0/0:20,0:22:42.14:0,42,3072	0/0:22,0:24:51.15:0,51,3225	0/1:15,0:20:44.79:45,0,91	0/1:17,0:16:13.20:13,0,319	1/1:11,12:23:1.20:1315,1,0	1/1:10,14:26:27.09:1202,27,0	1/1:25,0:23:12.04:298,12,0	0/0:15,0:15:18.06:0,18,1315	0/0:9,0:14:24.08:0,24,1373	0/0:19,0:26:38.84:0,39,1776	0/0:16,0:18:42.12:0,42,2547	0/0:27,0:27:57.18:0,57,2814	1/1:15,2:17:33.11:1095,33,0	0/0:8,0:8:15.05:0,15,730
chr10	108236208	.	A	AT	1214.81	PASS	AB=0.887;AC=6;AF=0.107;AN=56;BaseQRankSum=8.148;DP=699;FS=2.831;HRun=0;HaplotypeScore=128.9102;InbreedingCoeff=-0.1295;MQ=50.52;MQ0=30;MQRankSum=-3.362;QD=9.57;ReadPosRankSum=1.791;VQSLOD=4.1548;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:5.22:0,5,450	0/1:7,1:10:99:102,0,105	0/0:43,0:8:21.07:0,21,286	0/0:49,0:8:17.76:0,18,247	0/0:17,0:16:27.03:0,27,342	0/0:33,0:33:65.73:0,66,828	0/0:20,0:20:8.84:0,9,460	0/1:24,0:23:99:375,0,221	0/0:20,0:19:45.04:0,45,578	0/0:25,0:24:63.06:0,63,809	0/0:21,0:21:41.59:0,42,485	0/0:27,0:27:60.16:0,60,796	0/0:17,0:17:51.10:0,51,664	0/0:28,0:28:66.17:0,66,891	0/0:33,0:32:75.14:0,75,994	0/0:28,0:28:78.01:0,78,997	0/0:22,0:22:20.41:0,20,267	0/0:25,0:23:22.22:0,22,743	0/1:22,0:22:99:286,0,355	0/1:23,1:24:54.22:138,0,54	0/1:21,8:25:57.51:58,0,213	0/0:25,0:24:48.10:0,48,627	0/0:18,0:18:35.90:0,36,400	0/0:29,0:28:59.64:0,60,668	0/0:21,0:20:51.08:0,51,650	0/0:30,0:30:87.28:0,87,1189	0/1:7,9:18:99:380,0,132	0/0:6,0:6:15:0,15,185
chr10	108237924	.	TG	T	4160.99	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.873;DP=500;FS=7.328;HRun=3;HaplotypeScore=51.5377;InbreedingCoeff=0.9950;MQ=72.46;MQ0=0;MQRankSum=-2.243;QD=33.56;ReadPosRankSum=-1.981;VQSLOD=3.0098;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.25:0,87,1230	1/1:0,8:8:24.08:297,24,0	0/0:15,0:14:36.12:0,36,497	0/0:11,0:10:20.88:0,21,236	0/0:15,0:15:42.14:0,42,597	0/0:14,0:14:42.14:0,42,605	0/0:14,0:14:42.14:0,42,605	1/1:3,31:34:93.26:1126,93,0	0/0:21,0:21:63.21:0,63,907	0/0:20,0:20:60.19:0,60,847	0/0:20,0:20:54.18:0,54,778	0/0:13,0:13:39.13:0,39,561	0/0:14,0:14:42.14:0,42,605	0/0:11,0:11:33.10:0,33,456	0/0:25,0:25:75.24:0,75,1062	0/0:17,0:17:51.17:0,51,735	0/0:31,0:31:93.31:0,93,1336	0/0:22,0:22:60.20:0,60,860	1/1:1,18:19:54.15:655,54,0	1/1:1,14:15:36.11:446,36,0	1/1:1,24:25:66.21:818,66,0	0/0:8,0:8:24.08:0,24,346	0/0:17,0:17:51.17:0,51,734	0/0:5,0:5:15.05:0,15,216	0/0:17,0:17:45.15:0,45,648	0/0:16,0:16:48.16:0,48,691	1/1:0,23:23:66.21:818,66,0	0/0:20,0:20:60.20:0,60,864
chr10	108238282	.	TAC	T	151.06	PASS	AB=0.950;AC=12;AF=0.240;AN=50;BaseQRankSum=1.264;DP=541;FS=6.958;HRun=0;HaplotypeScore=74.9549;InbreedingCoeff=-0.2095;MQ=62.89;MQ0=7;MQRankSum=0.436;QD=0.71;ReadPosRankSum=1.585;VQSLOD=0.6591;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:14.95:0,15,133	0/0:5,0:5:6:0,6,67	./.	./.	0/1:16,0:16:22.58:23,0,98	0/1:14,0:14:11.29:11,0,98	0/1:9,0:10:5.11:5,0,54	./.	0/0:22,0:22:2.83:0,3,405	0/0:17,0:17:0.34:0,0,152	0/1:18,0:18:8.65:9,0,99	1/1:8,0:13:11.68:84,12,0	0/0:16,0:16:14.96:0,15,215	0/1:13,2:15:19.98:20,0,112	0/1:29,0:29:32.82:33,0,408	0/0:19,1:20:1.03:0,1,389	0/0:16,0:19:6.01:0,6,65	0/0:16,0:17:20.12:0,20,215	0/0:18,0:17:3:0,3,28	0/0:13,0:13:6.02:0,6,83	0/1:24,0:24:5.92:6,0,190	0/1:25,2:27:8.18:8,0,232	0/1:12,4:17:28.66:29,0,113	0/0:26,0:26:7.40:0,7,287	0/1:28,0:28:56.37:56,0,163	0/0:23,0:22:0.05:0,0,128	0/0:20,0:24:36.05:0,36,405	0/0:7,0:7:12.02:0,12,156
chr10	108240721	.	AAG	A	1052.98	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=8.501;DP=421;FS=52.755;HRun=0;HaplotypeScore=55.8839;InbreedingCoeff=0.3726;MQ=47.67;MQ0=20;MQRankSum=-6.847;QD=4.28;ReadPosRankSum=-2.806;VQSLOD=-0.1664;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:35.57:36,0,257	1/1:6,1:6:14.92:118,15,0	0/1:10,0:1:0:0,0,0	0/1:21,0:3:0.08:0,0,12	0/1:15,0:14:0.97:1,0,179	0/0:13,0:13:5.13:0,5,199	0/1:13,0:12:6.90:7,0,155	1/1:25,5:27:38.63:324,39,0	0/0:5,0:5:14.79:0,15,118	0/1:15,0:14:6.85:7,0,237	0/0:22,0:21:6.50:0,6,312	0/0:15,0:15:34.78:0,35,248	0/0:5,0:5:14.69:0,15,106	0/1:12,0:11:29:29,0,71	0/0:19,0:19:17.69:0,18,311	0/1:10,0:9:13.62:14,0,94	0/0:37,0:35:20.36:0,20,373	0/1:31,0:30:18.76:19,0,331	1/1:14,0:11:31.86:231,32,0	1/1:8,0:8:23.70:170,24,0	1/1:9,1:10:22.75:143,23,0	0/0:6,0:4:8.38:0,8,72	0/1:6,0:6:0.22:0,0,61	0/0:11,0:10:26.22:0,26,245	0/0:14,0:14:18.48:0,18,263	0/0:19,0:20:37.19:0,37,366	1/1:15,1:14:21.66:134,22,0	0/0:8,0:7:17.92:0,18,175
chr10	108240736	.	G	GA	1151.97	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=1.613;DP=419;FS=3.956;HRun=8;HaplotypeScore=53.5119;InbreedingCoeff=0.8496;MQ=58.11;MQ0=10;MQRankSum=-0.182;QD=11.75;ReadPosRankSum=-3.087;VQSLOD=1.9037;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:49.22:0,49,463	1/1:1,5:5:12.04:138,12,0	0/1:13,0:7:4.29:4,0,107	0/0:29,0:9:9.44:0,9,123	0/0:15,0:15:25.19:0,25,221	0/0:13,0:13:23.61:0,24,202	0/0:10,0:11:23.03:0,23,192	1/1:13,20:31:41.36:594,41,0	0/0:6,0:6:17.56:0,18,135	0/0:14,0:13:30:0,30,274	0/0:21,0:20:42.08:0,42,368	0/0:11,0:11:17.97:0,18,157	0/0:6,0:6:16.21:0,16,130	0/0:8,0:8:8.67:0,9,82	0/0:18,0:18:41.71:0,42,367	0/0:8,0:8:17.81:0,18,150	0/0:37,0:37:80.65:0,81,700	0/0:29,0:29:53.43:0,53,485	1/1:7,4:10:9.03:101,9,0	1/1:4,7:11:18.05:206,18,0	1/1:2,8:10:12.04:139,12,0	0/0:5,0:4:9:0,9,82	0/0:7,0:7:11.69:0,12,109	0/0:12,0:12:27.01:0,27,246	0/0:14,0:14:24.86:0,25,217	0/0:18,0:18:39:0,39,353	1/1:5,9:13:14.71:149,15,0	0/0:13,0:12:27.01:0,27,247
chr10	108241101	.	CAA	C	1855.15	PASS	AB=0.587;AC=13;AF=0.232;AN=56;BaseQRankSum=3.962;DP=578;FS=18.103;HRun=14;HaplotypeScore=76.2847;InbreedingCoeff=0.6647;MQ=75.08;MQ0=9;MQRankSum=2.664;QD=12.53;ReadPosRankSum=5.032;VQSLOD=0.7971;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:4,1:15:3.84:4,0,70	0/1:2,6:8:13.56:121,0,14	0/0:28,0:11:11.95:0,12,66	0/0:44,0:25:12.69:0,13,93	0/0:27,2:30:8.49:0,8,642	0/0:18,0:18:35.61:0,36,469	0/0:22,1:25:24.68:0,25,617	1/1:9,21:31:59.53:524,60,0	0/0:14,0:14:27.06:0,27,337	0/0:22,1:23:17.35:0,17,527	0/0:25,0:25:39.05:0,39,419	0/0:23,0:24:59.66:0,60,751	0/0:14,0:14:18.47:0,18,219	0/0:25,1:25:23.33:0,23,564	0/0:18,0:19:48.08:0,48,591	0/0:21,1:23:3.61:0,4,601	0/0:7,1:25:10.69:0,11,127	0/1:6,7:19:99:139,0,114	1/1:8,13:22:32.24:326,32,0	1/1:2,13:16:29.63:262,30,0	1/1:6,16:22:38.22:360,38,0	0/0:10,0:11:20.50:0,21,218	0/0:14,0:17:32.08:0,32,383	0/0:12,1:15:10.83:0,11,416	0/0:13,0:14:41.56:0,42,511	0/0:12,0:17:35.43:0,35,382	1/1:2,11:15:17.27:300,17,0	0/0:15,0:16:41.62:0,42,538
chr10	108242040	.	GT	G	1115.66	PASS	AB=0.697;AC=16;AF=0.286;AN=56;BaseQRankSum=9.069;DP=611;FS=0.802;HRun=15;HaplotypeScore=91.6987;InbreedingCoeff=0.7225;MQ=53.89;MQ0=16;MQRankSum=-0.733;QD=5.52;ReadPosRankSum=2.249;VQSLOD=2.8833;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,21:26:56.04:362,56,0	1/1:4,0:9:10.38:30,10,0	0/0:28,0:6:1.83:0,2,5	0/0:17,0:8:4.25:0,4,29	0/0:15,1:16:12.46:0,12,223	0/0:21,1:22:23.46:0,23,368	0/0:18,0:19:39.90:0,40,314	0/1:29,4:43:18.08:112,0,18	0/0:16,0:16:21.74:0,22,262	0/0:27,1:28:19.50:0,19,389	0/0:16,0:16:11.98:0,12,198	0/0:17,0:19:23.42:0,23,172	0/0:22,0:21:50.44:0,50,381	0/0:12,0:12:26.27:0,26,170	0/0:24,0:24:21.88:0,22,367	0/0:13,2:16:8.17:0,8,163	1/1:5,15:20:47.24:307,47,0	1/1:8,13:21:38.13:249,38,0	0/1:11,1:21:39.59:40,0,57	1/1:6,1:20:30.13:98,30,0	1/1:8,0:13:13.25:38,13,0	0/0:16,0:15:6.65:0,7,165	0/0:26,0:27:13.98:0,14,305	0/0:23,0:21:19.77:0,20,297	0/0:19,0:20:41.58:0,42,334	0/0:37,3:38:12.13:0,12,464	1/1:13,0:19:25.04:74,25,0	0/0:18,2:21:14.36:0,14,349
chr10	108242072	.	TTG	T	1279.13	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=7.630;DP=543;FS=0.457;HRun=0;HaplotypeScore=93.6305;InbreedingCoeff=0.9081;MQ=48.07;MQ0=18;MQRankSum=-5.734;QD=9.99;ReadPosRankSum=-4.939;VQSLOD=2.1413;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:36.43:0,36,461	1/1:3,9:10:19.20:194,19,0	./.	0/1:5,0:2:0:0,0,0	0/0:16,0:16:19.70:0,20,408	0/0:21,0:21:32.36:0,32,676	0/0:18,0:18:47.96:0,48,605	1/1:31,1:29:2.89:318,3,0	0/0:18,0:18:40.64:0,41,547	0/0:25,0:24:69.18:0,69,945	0/0:14,0:13:34:0,34,369	0/0:21,0:21:43.60:0,44,628	0/0:19,0:19:36.49:0,36,549	0/0:10,0:10:18.69:0,19,277	0/0:30,0:30:60.99:0,61,869	0/0:17,0:17:38.50:0,38,550	0/0:20,0:19:42.79:0,43,359	0/0:15,0:15:43.27:0,43,360	1/1:18,2:15:7.48:289,7,0	1/1:21,3:24:29.33:274,29,0	1/1:15,0:12:17.06:111,17,0	0/0:19,0:18:48.83:0,49,643	0/0:15,0:15:38.01:0,38,557	0/0:35,0:32:81.23:0,81,1169	0/0:20,0:20:51.96:0,52,671	0/0:23,0:23:55.81:0,56,681	1/1:19,1:19:41.46:266,41,0	0/0:21,0:21:58.91:0,59,806
chr10	108242073	.	TG	T	1733.92	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=7.542;DP=534;FS=6.867;HRun=1;HaplotypeScore=81.2725;InbreedingCoeff=0.9889;MQ=48.16;MQ0=17;MQRankSum=-6.050;QD=14.45;ReadPosRankSum=-5.447;VQSLOD=0.8626;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:37.56:0,38,352	1/1:12,0:10:14.47:130,14,0	./.	./.	0/0:15,0:15:19.45:0,19,317	0/0:20,0:20:30.71:0,31,512	0/0:18,0:18:47.08:0,47,454	1/1:12,19:28:24.84:541,25,0	0/0:18,0:18:15.95:0,16,377	0/0:25,0:24:64.85:0,65,660	0/0:14,0:13:33.13:0,33,285	0/0:21,0:21:32.88:0,33,469	0/0:19,0:19:22.78:0,23,405	0/0:10,0:10:18.66:0,19,233	0/0:30,0:30:47.62:0,48,644	0/0:17,0:17:30.16:0,30,416	0/0:19,0:18:43.26:0,43,289	0/0:15,0:15:41.57:0,42,242	1/1:17,3:15:34.56:353,35,0	1/1:15,8:23:31.51:341,32,0	1/1:9,6:12:23.81:173,24,0	0/0:19,0:18:32.80:0,33,479	0/0:15,0:15:29.91:0,30,406	0/0:34,0:31:80.67:0,81,898	0/0:20,0:20:52.73:0,53,503	0/0:23,0:23:50.99:0,51,544	1/1:13,6:18:46.53:377,47,0	0/0:21,0:21:44.10:0,44,616
chr10	108242074	.	G	GT	794.11	PASS	AB=0.883;AC=10;AF=0.192;AN=52;BaseQRankSum=4.440;DP=530;FS=0.000;HRun=10;HaplotypeScore=86.4226;InbreedingCoeff=0.5388;MQ=48.21;MQ0=15;MQRankSum=-7.474;QD=5.40;ReadPosRankSum=-0.964;VQSLOD=1.2212;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,13:23:11.12:274,11,0	0/0:11,0:9:3.76:0,4,9	./.	./.	0/0:15,0:15:22.66:0,23,191	0/0:20,0:20:35.82:0,36,295	0/0:18,0:18:29.90:0,30,245	0/1:31,0:28:2.75:3,0,8	0/0:18,0:18:23.72:0,24,197	0/0:24,0:23:38.88:0,39,319	0/0:13,0:13:14.89:0,15,122	0/0:21,0:21:35.35:0,35,294	0/0:17,0:17:26.90:0,27,222	0/0:10,0:10:20.94:0,21,172	0/0:31,0:31:26.03:0,26,368	0/0:17,0:17:29.93:0,30,246	0/1:8,12:20:16.04:226,0,16	1/1:3,12:15:17.46:389,17,0	0/0:21,0:17:12.33:0,12,55	0/0:23,0:23:10.90:0,11,31	0/1:15,0:12:0:0,0,0	0/0:17,2:18:41.81:0,42,331	0/0:15,0:15:26.89:0,27,218	0/0:33,0:30:62.85:0,63,517	0/1:19,2:21:8.09:8,0,144	0/0:19,1:21:25.93:0,26,203	1/1:18,0:18:2.55:29,3,0	0/0:20,1:21:47.91:0,48,389
chr10	108243962	.	TGGGG	T	2471.75	PASS	AB=0.814;AC=17;AF=0.315;AN=54;BaseQRankSum=5.572;DP=357;FS=30.306;HRun=15;HaplotypeScore=83.7441;InbreedingCoeff=0.5043;MQ=77.00;MQ0=10;MQRankSum=-4.837;QD=13.81;ReadPosRankSum=8.586;VQSLOD=-0.6751;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:12,1:15:16.49:60,0,16	1/1:2,11:14:29.75:391,30,0	0/0:29,0:19:26.09:0,26,300	0/1:31,0:21:22.91:23,0,145	0/0:5,0:5:2.30:0,2,36	0/0:13,0:13:18.06:0,18,330	0/0:12,0:12:11.70:0,12,165	1/1:8,11:19:27.67:442,28,0	0/0:9,0:12:11.33:0,11,236	0/0:5,0:5:0:0,0,0	0/0:5,0:5:0:0,0,0	0/0:15,0:15:15.80:0,16,274	0/0:9,0:9:3.01:0,3,45	0/0:10,0:10:12.93:0,13,214	0/0:17,0:17:24.08:0,24,429	0/0:7,0:8:14.95:0,15,154	0/1:11,2:20:43.02:111,0,43	1/1:3,0:4:1.19:3,1,0	1/1:5,7:11:20.49:266,20,0	1/1:8,14:22:37.92:523,38,0	1/1:9,8:19:15.16:205,15,0	0/0:2,0:2:0:0,0,0	0/0:7,0:7:0:0,0,0	0/0:5,0:5:0:0,0,0	0/0:6,0:7:3:0,3,27	0/0:12,0:13:6.02:0,6,99	1/1:5,15:20:45.04:613,45,0	./.
chr10	108246677	.	C	CA	906.29	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.503;DP=212;FS=6.861;HRun=0;HaplotypeScore=26.6196;InbreedingCoeff=0.6771;MQ=68.94;MQ0=10;MQRankSum=-6.552;QD=30.21;ReadPosRankSum=0.044;VQSLOD=3.0177;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:7:18.06:0,18,250	1/1:0,2:2:6.02:88,6,0	0/0:26,0:9:17.06:0,17,151	0/0:43,0:8:13.21:0,13,103	0/0:5,0:6:14.64:0,15,177	0/0:10,0:10:18.03:0,18,233	0/0:3,0:3:9.03:0,9,125	1/1:0,11:11:33.11:491,33,0	0/0:4,0:2:6.02:0,6,83	0/0:5,0:4:15.05:0,15,210	0/0:6,0:5:15.05:0,15,210	0/0:10,0:9:27.09:0,27,376	0/0:4,0:4:8.99:0,9,103	0/0:2,0:2:3.01:0,3,42	0/0:6,0:5:12.04:0,12,167	0/0:5,0:4:6.02:0,6,84	0/0:7,0:6:9.03:0,9,126	0/0:4,0:4:9.03:0,9,125	1/1:0,7:7:18.06:267,18,0	1/1:0,1:1:3.01:44,3,0	1/1:2,1:1:3.01:44,3,0	0/0:1,0:1:3.01:0,3,42	0/0:2,0:2:6.02:0,6,84	0/0:5,0:4:9.03:0,9,126	0/0:8,0:8:24.08:0,24,334	0/0:12,0:12:36.12:0,36,501	1/1:1,5:5:9.03:131,9,0	0/0:4,0:4:6.02:0,6,84
chr10	108246879	.	TTTTTTTTTC	T	640.48	PASS	AB=0.990;AC=11;AF=0.196;AN=56;BaseQRankSum=6.112;DP=392;FS=39.310;HRun=0;HaplotypeScore=86.9074;InbreedingCoeff=0.3721;MQ=48.86;MQ0=35;MQRankSum=-4.153;QD=6.28;ReadPosRankSum=0.152;VQSLOD=-0.6250;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:27:13.68:14,0,504	1/1:1,6:7:6.02:115,6,0	0/0:16,0:3:5.96:0,6,43	0/0:12,0:2:3.01:0,3,93	0/0:20,0:18:52.89:0,53,1135	0/0:20,0:19:51.17:0,51,1299	0/0:29,0:28:71.98:0,72,1685	1/1:15,0:14:15.71:267,16,0	0/0:8,0:7:21.03:0,21,481	0/0:10,0:10:30.10:0,30,877	0/0:12,0:11:30:0,30,670	0/0:19,0:19:47.55:0,48,1247	0/0:10,0:10:26.94:0,27,539	0/0:9,0:9:27.06:0,27,592	0/0:14,0:12:33.07:0,33,652	0/0:7,0:7:15.02:0,15,399	0/0:22,0:20:1.37:0,1,408	0/1:15,0:13:25.11:25,0,260	0/1:18,1:10:1.01:177,0,1	0/1:6,0:5:21.85:78,0,22	1/1:7,0:7:6.44:102,6,0	0/0:6,0:5:12.04:0,12,344	0/0:5,0:5:13.29:0,13,342	0/0:22,0:21:49.47:0,49,1490	0/0:11,0:10:27.09:0,27,758	0/0:21,0:20:57.75:0,58,1140	0/1:5,0:5:13.99:15,0,14	0/0:17,0:13:32.65:0,33,768
chr10	108247318	.	CA	C	3144.78	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=14.180;DP=768;FS=2.259;HRun=6;HaplotypeScore=81.9492;InbreedingCoeff=0.9862;MQ=84.46;MQ0=0;MQRankSum=-3.536;QD=26.65;ReadPosRankSum=2.280;VQSLOD=4.2593;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,48:51:99:1354,126,0	0/0:4,0:4:12.04:0,12,158	0/0:28,0:28:68.33:0,68,863	0/0:20,0:20:52.38:0,52,613	0/0:23,0:23:62.91:0,63,771	0/0:18,0:18:54.12:0,54,690	0/0:30,0:30:75.23:0,75,970	0/0:32,0:32:84.25:0,84,1069	0/0:23,0:23:66.21:0,66,868	0/0:26,0:26:75.23:0,75,964	0/0:12,0:12:33.11:0,33,434	0/0:45,0:45:99:0,132,1710	0/0:29,0:29:84.26:0,84,1089	0/0:31,0:31:93.30:0,93,1223	0/0:40,0:40:99:0,111,1435	0/0:30,0:30:78.21:0,78,1007	1/1:0,37:37:99:1096,102,0	1/1:2,28:30:78.19:838,78,0	0/0:23,0:23:69.19:0,69,876	0/0:18,0:18:48.14:0,48,617	0/0:59,0:59:99:0,166,2141	0/0:16,0:16:45.13:0,45,564	0/0:15,0:15:45.15:0,45,592	0/0:38,0:38:99:0,108,1393	0/0:22,0:22:60.18:0,60,770	0/0:33,0:33:96.29:0,96,1225	0/0:27,0:26:78.25:0,78,1025	0/0:8,0:8:18.06:0,18,237
chr10	108255136	.	CAAA	C	1824.57	PASS	AB=0.663;AC=13;AF=0.232;AN=56;BaseQRankSum=-0.435;DP=602;FS=0.000;HRun=16;HaplotypeScore=97.4799;InbreedingCoeff=0.5746;MQ=52.58;MQ0=24;MQRankSum=2.237;QD=8.81;ReadPosRankSum=4.799;VQSLOD=-0.0140;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,17:30:21.66:360,22,0	0/1:5,2:7:1.93:112,0,2	0/0:20,0:5:4.43:0,4,53	0/0:22,0:7:1.13:0,1,13	0/0:27,0:28:32.13:0,32,657	0/0:19,0:20:44.52:0,45,500	0/0:12,0:12:33.04:0,33,471	1/1:11,14:22:37.74:358,38,0	0/0:24,0:23:48.36:0,48,582	0/0:35,0:34:84.49:0,84,1048	0/0:15,0:16:32.97:0,33,447	0/0:23,0:25:56.81:0,57,677	0/0:19,0:19:34.24:0,34,408	0/0:9,0:10:21.05:0,21,311	0/0:27,0:27:63.05:0,63,825	0/0:19,0:20:56.35:0,56,794	0/1:14,13:27:2.69:138,0,3	1/1:7,12:19:17.90:185,18,0	0/1:10,10:17:37.88:168,0,38	0/1:8,16:25:2.80:280,0,3	0/1:7,10:18:15.36:180,0,15	0/0:7,0:9:18.03:0,18,255	0/0:15,0:15:21:0,21,269	0/0:13,0:14:21.04:0,21,327	0/0:17,0:19:37.21:0,37,364	0/0:31,0:31:51.56:0,52,608	1/1:14,17:31:21.51:218,22,0	0/0:18,0:17:33.08:0,33,521
chr10	108255377	.	CACAGACAGACAG	C	2702.69	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=6.342;DP=612;FS=1.402;HRun=0;HaplotypeScore=206.1701;InbreedingCoeff=0.8726;MQ=56.87;MQ0=5;MQRankSum=-5.185;QD=15.18;ReadPosRankSum=-3.553;VQSLOD=1.5216;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:22:12.04:335,12,0	0/0:3,0:4:3.01:0,3,76	0/0:19,0:13:8.92:0,9,62	0/0:18,0:11:5.99:0,6,113	0/0:20,0:20:24.05:0,24,1099	0/0:22,0:22:39.13:0,39,2263	0/0:34,0:34:54.17:0,54,2482	1/1:44,0:42:18.03:260,18,0	0/0:29,0:29:57.18:0,57,2693	0/0:28,0:29:51.18:0,51,2628	0/0:17,0:17:36.12:0,36,1962	0/0:32,0:32:69.24:0,69,3661	0/0:13,0:13:21.07:0,21,1125	0/0:20,0:20:42.13:0,42,2046	0/0:30,0:30:57.15:0,57,2848	0/0:28,0:28:51.18:0,51,2979	1/1:11,0:16:9.01:191,9,0	1/1:11,0:14:3.01:84,3,0	1/1:16,5:21:14.90:398,15,0	1/1:11,11:22:30.10:1019,30,0	1/1:24,0:24:6:89,6,0	0/0:15,0:15:21.07:0,21,1116	0/0:14,0:15:33.10:0,33,1275	0/0:25,0:25:57.14:0,57,2525	0/0:14,0:14:27.09:0,27,1500	0/0:32,0:32:60.19:0,60,3059	1/1:9,6:15:15.52:517,16,0	0/0:18,0:18:54.19:0,54,3137
chr10	108256019	.	ATCTGTGTG	A	5187.21	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.604;DP=769;FS=3.522;HRun=0;HaplotypeScore=190.3824;InbreedingCoeff=0.9817;MQ=69.83;MQ0=0;MQRankSum=-9.759;QD=42.17;ReadPosRankSum=0.212;VQSLOD=4.5470;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:36:93.30:0,93,3657	1/1:1,5:6:9.50:237,10,0	0/0:28,0:26:51.05:0,51,1582	0/0:26,0:26:60.20:0,60,1993	0/0:35,0:35:66.19:0,66,2508	0/0:17,0:17:48.16:0,48,1932	0/0:25,0:25:69.24:0,69,2794	1/1:5,18:23:54.17:1260,54,0	0/0:38,0:38:87.30:0,87,3544	0/0:45,0:45:99:0,111,4367	0/0:23,0:23:36.10:0,36,1380	0/0:38,0:38:99:0,105,4307	0/0:35,0:35:90.31:0,90,3715	0/0:30,0:30:75.24:0,75,2946	0/0:40,0:40:99:0,102,3973	0/0:35,0:35:87.30:0,87,3467	0/0:25,0:25:63.20:0,63,2366	0/0:31,0:31:72.20:0,72,2781	1/1:6,12:18:30.03:709,30,0	1/1:6,11:16:30.10:767,30,0	1/1:15,16:31:15.05:395,15,0	0/0:24,0:24:45.15:0,45,1782	0/0:17,0:17:36.09:0,36,1260	0/0:29,0:29:69.21:0,69,2665	0/0:16,0:16:33.10:0,33,1292	0/0:36,1:37:14.19:0,14,3670	1/1:1,27:28:69.24:1819,69,0	0/0:15,0:15:36.12:0,36,1514
chr10	108257790	.	AC	A	2169.22	PASS	AB=0.910;AC=21;AF=0.375;AN=56;BaseQRankSum=9.052;DP=465;FS=0.818;HRun=10;HaplotypeScore=64.7909;InbreedingCoeff=0.7518;MQ=72.64;MQ0=0;MQRankSum=-0.034;QD=9.35;ReadPosRankSum=2.301;VQSLOD=2.3229;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,1:33:51.66:168,52,0	1/1:3,9:12:23.99:208,24,0	0/1:13,1:13:32.84:72,0,33	0/0:14,0:11:3.07:0,3,104	0/0:12,0:12:24:0,24,250	0/0:18,1:19:19.07:0,19,438	0/0:16,0:16:33.08:0,33,357	1/1:9,14:25:38.94:339,39,0	0/0:13,0:13:12.04:0,12,300	0/0:15,0:15:42.11:0,42,462	0/0:12,0:12:21.02:0,21,213	0/0:19,1:20:20.17:0,20,449	0/0:14,0:14:27.07:0,27,298	0/0:12,0:12:31.86:0,32,355	0/0:21,0:21:18.42:0,18,398	0/1:18,2:20:3.97:4,0,416	1/1:3,0:23:40.74:120,41,0	1/1:0,0:18:34.63:102,35,0	1/1:8,14:22:44.93:384,45,0	1/1:4,11:15:25.73:232,26,0	1/1:3,16:20:46.38:379,46,0	0/0:14,1:15:13:0,13,343	0/0:9,0:9:21.04:0,21,221	0/0:14,0:14:4.84:0,5,273	0/0:15,0:15:35.99:0,36,356	0/0:12,0:12:27.06:0,27,292	1/1:3,19:22:41.98:364,42,0	0/1:7,1:8:6.21:6,0,113
chr10	108259561	.	TTA	T	308.31	PASS	AB=0.819;AC=4;AF=0.071;AN=56;BaseQRankSum=5.826;DP=502;FS=0.000;HRun=0;HaplotypeScore=66.6606;InbreedingCoeff=-0.0777;MQ=55.64;MQ0=6;MQRankSum=-5.568;QD=5.82;ReadPosRankSum=-0.283;VQSLOD=2.6500;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,163,3162	0/1:3,1:4:39.84:40,0,113	0/0:20,0:12:32.14:0,32,599	0/0:26,0:20:57.07:0,57,982	0/0:12,0:12:36.12:0,36,699	0/0:17,0:17:51.17:0,51,1023	0/0:18,0:18:54.19:0,54,1080	0/0:18,0:18:54.18:0,54,1063	0/0:11,0:11:33.10:0,33,614	0/0:16,0:16:45.14:0,45,851	0/0:6,0:6:18.05:0,18,330	0/0:18,0:18:52.42:0,52,1004	0/0:20,0:20:60.21:0,60,1198	0/0:14,0:14:42.14:0,42,767	0/0:17,0:17:51.17:0,51,1019	0/0:20,0:20:60.21:0,60,1219	0/0:39,0:39:99:0,117,2377	0/0:22,0:22:63.22:0,63,1280	0/0:11,0:9:27.09:0,27,515	0/1:9,1:10:24.69:25,0,379	0/1:13,7:20:99:227,0,734	0/0:9,0:9:27.09:0,27,549	0/0:6,0:6:18.06:0,18,339	0/0:28,0:28:84.29:0,84,1675	0/0:8,0:8:24.08:0,24,471	0/0:19,0:19:57.18:0,57,1057	0/1:15,4:19:99:126,0,834	0/0:20,0:20:60.21:0,60,1202
chr10	108259587	.	C	CCCG	1751.31	PASS	AB=0.665;AC=5;AF=0.089;AN=56;BaseQRankSum=6.395;DP=535;FS=2.267;HRun=0;HaplotypeScore=82.7115;InbreedingCoeff=-0.0990;MQ=65.38;MQ0=3;MQRankSum=-6.349;QD=19.90;ReadPosRankSum=-2.240;VQSLOD=3.1952;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,157,2792	0/1:4,3:8:99:279,0,140	0/0:11,0:7:17.93:0,18,257	0/0:21,0:17:17.10:0,17,488	0/0:14,0:14:39.12:0,39,682	0/0:19,0:19:54.17:0,54,950	0/0:17,0:17:51.16:0,51,902	0/1:11,6:19:99:334,0,313	0/0:12,0:12:36.06:0,36,611	0/0:17,0:17:51.16:0,51,880	0/0:12,0:12:29.69:0,30,498	0/0:24,0:24:69.24:0,69,1257	0/0:26,0:25:72.25:0,72,1310	0/0:14,0:14:39.13:0,39,714	0/0:14,0:14:39.13:0,39,707	0/0:26,0:26:75.23:0,75,1311	0/0:39,0:39:99:0,111,2014	0/0:21,0:21:63.22:0,63,1141	0/0:12,1:11:33.11:0,33,590	0/1:9,7:17:99:322,0,290	0/1:11,12:24:99:397,0,362	0/0:7,0:7:21.07:0,21,384	0/0:12,0:12:36.08:0,36,552	0/0:26,0:26:75.24:0,75,1342	0/0:11,0:11:30.10:0,30,549	0/0:24,0:24:63.21:0,63,1116	0/1:8,11:20:99:537,0,389	0/0:15,0:15:42.12:0,42,728
chr10	108259739	.	C	CGTGCGTGT	2411	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=3.966;DP=679;FS=13.250;HRun=0;HaplotypeScore=166.4157;InbreedingCoeff=0.9375;MQ=60.67;MQ0=0;MQRankSum=-3.410;QD=16.86;ReadPosRankSum=-2.836;VQSLOD=1.8677;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.06:0,96,1815	1/1:3,5:9:15.05:638,15,0	0/0:24,0:18:27.02:0,27,375	0/0:19,0:17:37.59:0,38,610	0/0:8,0:8:18.03:0,18,357	0/0:17,0:17:41.96:0,42,721	0/0:39,0:39:99:0,111,1802	1/1:23,0:23:47.98:470,48,0	0/0:23,0:23:66.06:0,66,1153	0/0:25,0:25:54.12:0,54,912	0/0:19,0:19:44.96:0,45,814	0/0:44,0:44:99:0,120,2628	0/0:22,0:22:60.08:0,60,1314	0/0:40,0:40:99:0,102,2151	0/0:23,0:23:60.14:0,60,1328	0/0:21,0:21:54.13:0,54,1315	0/0:39,0:39:99:0,108,1872	0/0:31,0:31:80.55:0,81,1443	1/1:8,9:22:47.49:599,47,0	1/1:1,9:12:9.03:345,9,0	1/1:25,35:71:11.35:406,11,0	0/0:11,0:11:21.07:0,21,535	0/0:16,0:16:36.03:0,36,550	0/0:31,0:31:84.07:0,84,1527	0/0:14,0:14:32.99:0,33,732	0/0:22,0:22:48.06:0,48,986	1/1:0,4:4:3.01:128,3,0	0/0:11,0:11:29.94:0,30,490
chr10	108263139	.	TAA	T	7675.16	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.874;DP=796;FS=1.826;HRun=2;HaplotypeScore=93.3583;InbreedingCoeff=1.0000;MQ=80.07;MQ0=1;MQRankSum=-1.601;QD=45.96;ReadPosRankSum=-0.487;VQSLOD=4.5717;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,168,3332	1/1:0,12:12:36.12:587,36,0	0/0:20,0:20:60.21:0,60,1176	0/0:21,0:21:54.16:0,54,1019	0/0:24,0:24:69.22:0,69,1361	0/0:20,0:20:60.21:0,60,1219	0/0:28,0:28:84.29:0,84,1687	1/1:0,35:35:99:1662,105,0	0/0:37,0:37:99:0,111,2256	0/0:39,0:39:99:0,117,2326	0/0:24,0:24:72.23:0,72,1411	0/0:36,0:36:99:0,108,2096	0/0:26,0:26:78.27:0,78,1559	0/0:32,0:32:93.32:0,93,1879	0/0:30,0:30:90.31:0,90,1829	0/0:28,0:28:84.29:0,84,1707	0/0:21,0:21:63.22:0,63,1253	0/0:19,0:19:57.20:0,57,1157	1/1:0,19:19:57.16:902,57,0	1/1:0,31:30:87.26:1391,87,0	1/1:0,35:35:93.32:1518,93,0	0/0:27,0:27:81.28:0,81,1637	0/0:27,0:27:78.27:0,78,1570	0/0:39,0:38:99:0,117,2378	0/0:16,0:16:48.16:0,48,966	0/0:41,0:41:99:0,123,2497	1/1:0,35:35:99:1615,99,0	0/0:17,0:17:51.14:0,51,985
chr10	108264623	.	AC	A	1097.19	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=-2.786;DP=473;FS=2.014;HRun=2;HaplotypeScore=64.4625;InbreedingCoeff=0.9660;MQ=64.55;MQ0=27;MQRankSum=0.213;QD=14.25;ReadPosRankSum=-2.111;VQSLOD=2.3982;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:41.66:0,42,322	1/1:5,0:5:14.92:117,15,0	0/0:37,0:14:14.65:0,15,156	0/0:28,0:11:16.42:0,16,100	0/0:15,0:15:26.74:0,27,223	0/0:25,0:24:50.93:0,51,444	0/0:11,0:10:23.94:0,24,200	1/1:10,11:18:20.92:221,21,0	0/0:13,0:13:17.94:0,18,170	0/0:14,0:12:20.63:0,21,169	0/0:8,0:8:14.63:0,15,115	0/0:15,0:14:29.92:0,30,246	0/0:8,0:8:17.95:0,18,149	0/0:23,0:21:35.38:0,35,273	0/0:16,0:15:29.96:0,30,262	0/0:9,0:8:14.91:0,15,116	0/0:26,1:25:47.71:0,48,412	0/0:27,0:26:26.27:0,26,190	1/1:15,0:15:41.54:338,42,0	1/1:17,0:15:32.94:270,33,0	./.	0/0:8,0:8:13.38:0,13,116	0/0:10,0:9:20.98:0,21,177	0/0:12,0:11:17.91:0,18,157	0/0:25,0:24:47.53:0,48,382	0/0:27,1:25:32.87:0,33,283	1/1:19,0:19:39.82:323,40,0	0/0:15,0:11:26.92:0,27,220
chr10	108269655	.	ACG	A	1140.34	PASS	AB=0.894;AC=14;AF=0.280;AN=50;BaseQRankSum=10.128;DP=431;FS=34.192;HRun=0;HaplotypeScore=98.7441;InbreedingCoeff=0.7161;MQ=52.85;MQ0=5;MQRankSum=-7.211;QD=6.83;ReadPosRankSum=1.021;VQSLOD=1.6236;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:22:0.31:46,0,0	1/1:2,8:10:3.01:37,3,0	./.	./.	0/0:7,0:7:15.03:0,15,213	0/0:5,0:5:15.05:0,15,247	0/0:42,0:42:99:0,120,1710	1/1:8,7:12:17.98:184,18,0	0/0:11,0:11:27.08:0,27,424	0/0:17,0:17:34.98:0,35,468	0/0:9,0:9:3.01:0,3,51	0/0:16,0:16:27.08:0,27,422	0/0:11,0:11:30.07:0,30,455	0/0:14,0:14:30.05:0,30,422	0/0:7,0:7:12.03:0,12,178	0/0:4,0:4:12.03:0,12,178	1/1:25,0:25:15.18:168,15,0	1/1:24,0:24:41.42:410,41,0	1/1:4,12:16:25.24:333,25,0	./.	0/1:30,11:37:37.39:55,0,37	0/0:14,0:14:41.77:0,42,531	0/0:12,0:12:30.02:0,30,411	0/0:39,1:40:69.16:0,69,1497	0/0:16,0:15:38.98:0,39,472	0/0:14,0:14:30.07:0,30,456	1/1:2,10:12:6.02:77,6,0	0/0:1,0:1:3.01:0,3,40
chr10	108269673	.	G	GCA	1003.38	PASS	AB=1.000;AC=7;AF=0.135;AN=52;BaseQRankSum=9.015;DP=364;FS=50.238;HRun=0;HaplotypeScore=90.7362;InbreedingCoeff=0.6456;MQ=48.85;MQ0=5;MQRankSum=-7.870;QD=12.70;ReadPosRankSum=-1.183;VQSLOD=1.1291;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,15:22:12.04:175,12,0	0/0:7,0:7:2.04:0,2,6	0/0:6,0:1:2.80:0,3,13	./.	0/0:5,0:5:12.04:0,12,184	0/0:5,0:5:15.05:0,15,226	0/0:40,0:40:99:0,117,1657	0/0:6,0:3:7.77:0,8,47	0/0:6,0:6:18.06:0,18,274	0/0:15,0:14:33.11:0,33,487	0/0:5,0:5:3.01:0,3,46	0/0:8,0:8:18.06:0,18,276	0/0:9,0:9:27.09:0,27,413	0/0:10,0:10:27.09:0,27,413	0/0:5,0:5:15.05:0,15,228	0/0:4,0:4:12.04:0,12,182	1/1:14,13:27:23.30:297,23,0	1/1:12,13:25:52.97:663,53,0	0/0:15,0:13:13.29:0,13,250	./.	0/0:29,0:25:4.05:0,4,52	0/0:16,0:16:42.12:0,42,616	0/0:10,0:10:30.08:0,30,404	0/0:41,0:41:99:0,111,1671	0/0:14,0:14:42.14:0,42,631	0/0:14,0:14:36.12:0,36,546	0/1:4,0:4:4.74:5,0,9	0/0:2,0:2:6.01:0,6,73
chr10	108269683	.	ACGCG	A	385.80	PASS	AB=0.846;AC=9;AF=0.180;AN=50;BaseQRankSum=7.028;DP=338;FS=40.010;HRun=0;HaplotypeScore=89.5162;InbreedingCoeff=0.3474;MQ=49.01;MQ0=4;MQRankSum=-7.032;QD=4.02;ReadPosRankSum=-0.780;VQSLOD=0.1190;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,12:21:2.51:14,3,0	0/1:5,0:7:0:0,0,0	0/0:6,0:1:3.01:0,3,32	./.	0/0:5,0:5:15.05:0,15,355	0/0:3,0:3:9.03:0,9,196	0/0:40,0:40:99:0,111,2733	0/0:3,0:2:5.71:0,6,32	0/0:7,0:7:21.07:0,21,480	0/0:15,0:14:26.82:0,27,578	0/1:8,0:8:0:0,0,0	0/0:6,0:6:18.05:0,18,391	0/0:9,0:9:27.09:0,27,679	0/0:10,0:10:27.09:0,27,711	0/0:5,0:5:12.04:0,12,300	0/0:4,0:4:9.03:0,9,237	0/1:17,8:25:4.82:79,0,5	0/1:13,10:23:33.38:352,0,33	0/1:7,0:5:11.60:12,0,25	./.	./.	0/0:13,0:13:36.12:0,36,930	0/0:10,0:10:24.08:0,24,629	0/0:41,0:41:99:0,117,2735	0/0:15,0:15:42.14:0,42,1095	0/0:13,0:12:33.10:0,33,733	1/1:4,0:4:3.01:43,3,0	0/0:4,0:4:12.04:0,12,202
chr10	108269689	.	GCGCA	G	142.71	PASS	AB=1.000;AC=9;AF=0.188;AN=48;BaseQRankSum=6.648;DP=329;FS=20.977;HRun=0;HaplotypeScore=85.5996;InbreedingCoeff=0.4418;MQ=49.35;MQ0=2;MQRankSum=-6.818;QD=1.70;ReadPosRankSum=-0.544;VQSLOD=0.1065;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:18:0.30:1,0,0	./.	0/0:7,0:1:3.01:0,3,39	./.	0/0:6,0:6:18.05:0,18,420	0/0:3,0:3:8.98:0,9,186	0/0:41,0:41:99:0,120,2965	./.	0/0:8,0:8:24.05:0,24,486	0/0:13,0:12:26.80:0,27,602	0/1:7,0:7:0:0,0,0	0/0:7,0:7:18.03:0,18,375	0/0:9,0:9:27.09:0,27,578	0/0:11,0:11:30.10:0,30,787	0/0:5,0:5:15.05:0,15,371	0/0:4,0:4:12.04:0,12,321	0/1:25,0:25:2.59:41,0,3	0/1:24,0:24:70.35:121,0,70	1/1:5,1:4:2.54:32,3,0	./.	0/0:12,2:13:2.98:0,3,21	0/0:12,0:12:36.12:0,36,978	0/0:10,0:10:24.08:0,24,658	0/0:41,0:41:99:0,117,2825	0/0:15,0:15:45.14:0,45,1174	0/0:13,0:12:36.06:0,36,731	1/1:1,2:3:3.01:58,3,0	0/0:4,0:4:12.04:0,12,208
chr10	108269701	.	GCACGCGCACC	G	866.86	PASS	AB=0.590;AC=8;AF=0.160;AN=50;BaseQRankSum=7.258;DP=343;FS=7.519;HRun=0;HaplotypeScore=107.8701;InbreedingCoeff=0.4325;MQ=51.79;MQ0=2;MQRankSum=-7.752;QD=10.44;ReadPosRankSum=-0.818;VQSLOD=1.4077;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,11:24:0:0,0,0	./.	0/0:10,0:3:6.02:0,6,96	0/0:10,0:2:0.43:0,0,1	0/0:6,0:6:18.06:0,18,819	0/0:2,0:2:6.02:0,6,172	0/0:40,0:40:99:0,117,4924	./.	0/0:6,0:6:18.03:0,18,606	0/0:15,0:14:2.46:0,2,510	./.	0/0:5,0:5:15.04:0,15,531	0/0:5,0:5:12.03:0,12,485	0/0:11,0:11:33.07:0,33,1492	0/0:6,0:6:18.02:0,18,804	0/0:5,0:5:15.05:0,15,603	0/1:8,20:28:2.17:337,0,2	0/1:9,19:28:56.67:593,0,57	1/1:2,0:2:3.85:22,4,0	0/0:1,0:1:2.04:0,2,6	1/1:22,0:22:0.89:3,1,0	0/0:14,0:14:42.10:0,42,1800	0/0:11,0:11:30.08:0,30,1136	0/0:43,0:43:99:0,123,5427	0/0:18,0:18:54.16:0,54,2514	0/0:13,0:12:36.12:0,36,1494	1/1:2,0:2:2.99:23,3,0	0/0:3,0:3:6.02:0,6,266
chr10	108269715	.	GCGCGCACACACGCA	G	699.64	PASS	AB=1.000;AC=7;AF=0.135;AN=52;BaseQRankSum=4.947;DP=317;FS=6.381;HRun=0;HaplotypeScore=112.8928;InbreedingCoeff=0.4683;MQ=53.07;MQ0=4;MQRankSum=-0.692;QD=15.90;ReadPosRankSum=-2.608;VQSLOD=0.5297;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:6.02:0,6,212	./.	0/0:12,0:2:2.99:0,3,24	0/0:13,0:2:2.93:0,3,19	0/0:9,0:9:21.07:0,21,1086	0/0:1,0:1:3.01:0,3,115	0/0:36,0:36:78.27:0,78,3918	0/0:1,0:1:3.01:0,3,59	0/0:3,0:3:9.03:0,9,488	1/1:2,13:15:30.05:747,30,0	1/1:0,8:8:0.40:1,0,0	0/0:4,0:4:9.03:0,9,450	0/0:3,0:3:6.02:0,6,153	0/0:10,0:10:21.07:0,21,810	0/0:6,0:6:18.06:0,18,977	0/0:5,0:5:9.03:0,9,503	0/0:24,0:24:4.01:0,4,220	0/0:26,0:26:37.56:0,38,587	1/1:2,0:1:3.01:57,3,0	0/0:3,0:3:6.11:0,6,18	0/1:19,0:18:0.04:0,0,0	0/0:17,0:17:48.15:0,48,2244	0/0:10,0:10:15.05:0,15,877	0/0:36,0:36:99:0,99,5636	0/0:19,0:19:54.19:0,54,2760	0/0:14,0:14:30.10:0,30,1512	./.	0/0:3,0:3:6.02:0,6,367
chr10	108269747	.	A	ACG	85.21	PASS	AB=0.904;AC=7;AF=0.130;AN=54;BaseQRankSum=4.714;DP=383;FS=4.897;HRun=0;HaplotypeScore=73.5795;InbreedingCoeff=0.3008;MQ=55.47;MQ0=5;MQRankSum=-2.565;QD=1.00;ReadPosRankSum=-1.656;VQSLOD=0.3738;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:33.11:0,33,494	./.	0/0:11,0:1:1.25:0,1,3	0/1:14,0:6:0.19:0,0,40	0/0:10,0:10:30.07:0,30,410	0/0:4,0:4:12.04:0,12,177	0/0:23,0:23:63.15:0,63,916	0/1:11,4:15:59.81:105,0,60	0/0:5,0:5:15.04:0,15,204	0/0:17,0:17:37.21:0,37,553	0/0:12,0:12:12.03:0,12,161	0/0:4,0:4:12.04:0,12,175	0/0:4,0:4:9.03:0,9,134	0/0:4,0:4:12.04:0,12,184	0/0:6,0:6:18.05:0,18,254	0/0:9,0:9:27.08:0,27,388	0/0:28,0:28:39.07:0,39,542	0/0:32,0:32:66.05:0,66,978	0/1:11,1:11:46.96:47,0,67	1/1:5,9:14:3:32,3,0	1/1:23,6:29:2.29:8,2,0	0/0:20,0:20:51.12:0,51,691	0/0:8,0:8:21.05:0,21,299	0/0:32,0:32:90.22:0,90,1330	0/0:20,0:20:54.16:0,54,781	0/0:11,0:11:33.05:0,33,439	0/0:4,1:5:2.98:0,3,21	0/0:2,0:2:6.02:0,6,92
chr10	108269749	.	A	ACG	190.89	PASS	AB=0.904;AC=9;AF=0.167;AN=54;BaseQRankSum=4.426;DP=389;FS=8.931;HRun=0;HaplotypeScore=75.0109;InbreedingCoeff=0.3638;MQ=56.91;MQ0=5;MQRankSum=-2.098;QD=2.10;ReadPosRankSum=-2.720;VQSLOD=0.0424;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:33.11:0,33,494	./.	0/0:11,0:1:0:0,0,0	0/1:15,0:7:5.87:6,0,38	0/0:11,0:11:30.07:0,30,409	0/0:4,0:4:12.04:0,12,177	0/0:26,0:26:66.12:0,66,936	0/1:11,4:15:41.47:175,0,41	0/0:5,0:5:15.03:0,15,203	0/0:15,0:15:40.27:0,40,562	0/0:11,0:11:12.03:0,12,161	0/0:5,0:5:15.04:0,15,200	0/0:4,0:4:12.03:0,12,158	0/0:4,0:4:12.04:0,12,183	0/0:6,0:6:18.05:0,18,254	0/0:9,0:9:27.08:0,27,387	0/0:27,0:27:39.06:0,39,541	0/0:32,0:32:66.22:0,66,981	0/1:11,1:11:21:77,0,21	1/1:5,9:14:3:30,3,0	1/1:23,7:29:0.45:1,0,0	0/0:19,0:19:54.12:0,54,715	0/0:9,0:9:21.06:0,21,300	0/0:33,0:33:93.20:0,93,1348	0/0:20,0:20:54.16:0,54,778	0/0:11,0:11:21.11:0,21,408	1/1:4,1:5:2.94:18,3,0	0/0:2,0:2:6.02:0,6,92
chr10	108271387	.	GT	G	2420.06	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=8.224;DP=431;FS=7.127;HRun=12;HaplotypeScore=49.7311;InbreedingCoeff=0.8877;MQ=55.88;MQ0=24;MQRankSum=2.007;QD=14.07;ReadPosRankSum=1.388;VQSLOD=3.8275;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,28:38:55.04:588,55,0	1/1:1,2:3:5.98:46,6,0	0/0:7,0:2:3.01:0,3,30	0/0:8,0:4:5.99:0,6,54	0/0:12,0:12:27.04:0,27,268	0/0:14,0:13:27.05:0,27,274	0/0:16,0:17:41.85:0,42,397	1/1:6,16:21:41.81:325,42,0	0/0:10,0:9:18.34:0,18,183	0/0:17,0:16:39.03:0,39,376	0/0:6,0:6:9.01:0,9,86	0/0:23,1:23:31.25:0,31,463	0/0:15,0:13:27.04:0,27,268	0/0:16,0:16:32.57:0,33,296	0/0:17,0:17:33.05:0,33,328	0/0:18,0:19:41.92:0,42,410	1/1:7,27:31:53.25:596,53,0	1/1:6,16:19:41.84:325,42,0	1/1:0,4:5:13.97:96,14,0	1/1:5,9:14:17.91:139,18,0	1/1:4,7:10:14.45:116,14,0	0/0:17,0:15:29.89:0,30,288	0/0:8,0:8:5.76:0,6,61	0/0:14,1:15:18.87:0,19,365	0/0:13,0:12:17.87:0,18,183	0/0:19,1:19:24.81:0,25,413	1/1:4,19:23:50.75:395,51,0	0/0:2,0:2:6.01:0,6,61
chr10	108272084	.	CAAA	C	516.11	PASS	AB=0.767;AC=4;AF=0.071;AN=56;BaseQRankSum=7.174;DP=612;FS=4.772;HRun=14;HaplotypeScore=115.5602;InbreedingCoeff=0.5638;MQ=48.19;MQ0=29;MQRankSum=-6.816;QD=6.53;ReadPosRankSum=1.417;VQSLOD=0.4340;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,15:30:2.85:218,0,3	0/0:10,0:10:8.52:0,9,97	0/0:42,0:12:25.35:0,25,212	0/0:41,0:8:4.90:0,5,35	0/0:26,0:25:66.18:0,66,1071	0/0:18,0:18:51.13:0,51,840	0/0:16,0:18:45.09:0,45,690	0/0:21,0:19:30.28:0,30,161	0/0:22,0:23:60.10:0,60,919	0/0:35,0:35:76.30:0,76,1073	0/0:12,0:14:29.97:0,30,420	0/0:17,0:18:42.10:0,42,658	0/0:15,0:14:37.64:0,38,552	0/0:7,0:7:9.02:0,9,124	0/0:23,0:23:51.14:0,51,854	0/0:17,0:17:32.47:0,32,697	0/1:21,2:24:3.87:200,0,4	1/1:8,16:23:16.59:210,17,0	0/0:24,0:22:27.82:0,28,217	0/0:16,0:14:14.86:0,15,98	0/0:10,0:8:6.62:0,7,30	0/0:21,0:22:50.14:0,50,712	0/0:19,0:18:45.13:0,45,753	0/0:18,0:19:37.55:0,38,601	0/0:17,0:16:46.91:0,47,691	0/0:32,0:30:69.73:0,70,995	0/0:21,0:18:17.98:0,18,123	0/0:10,0:11:28.34:0,28,499
chr10	108272094	.	A	AC	743.95	PASS	AB=0.843;AC=7;AF=0.125;AN=56;BaseQRankSum=2.413;DP=655;FS=28.686;HRun=0;HaplotypeScore=100.3703;InbreedingCoeff=0.2600;MQ=52.65;MQ0=29;MQRankSum=0.670;QD=6.76;ReadPosRankSum=-2.382;VQSLOD=1.3863;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:28.19:0,28,235	0/1:10,0:10:39.94:40,0,48	0/0:58,0:15:29.58:0,30,260	0/0:64,0:11:4.93:0,5,38	0/0:25,0:24:61.09:0,61,837	0/0:22,0:21:63.10:0,63,757	0/0:20,0:20:57.54:0,58,656	0/1:9,19:28:0.24:314,0,0	0/0:21,0:21:63.07:0,63,737	0/0:33,0:30:79.42:0,79,903	0/0:16,0:15:38.16:0,38,403	0/0:18,0:17:43.89:0,44,444	0/0:16,0:14:34.95:0,35,367	0/0:4,0:4:11.89:0,12,110	0/0:28,0:28:60.14:0,60,728	0/0:18,0:17:47.15:0,47,582	0/0:26,0:26:45.09:0,45,275	0/0:24,0:23:37.56:0,38,223	0/1:24,0:24:59.97:207,0,60	0/1:16,0:14:47.92:141,0,48	1/1:10,0:8:9.85:87,10,0	0/0:19,0:19:54.04:0,54,635	0/0:19,0:19:51.14:0,51,659	0/0:20,0:19:41.25:0,41,470	0/0:18,0:17:48.06:0,48,570	0/0:31,0:28:71.37:0,71,795	0/1:8,12:18:33.93:87,0,34	0/0:11,0:11:33.05:0,33,418
chr10	108275501	.	T	TTAAGAGCACTGG	9650.67	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-5.815;DP=507;FS=7.947;HRun=0;HaplotypeScore=163.0904;InbreedingCoeff=0.9920;MQ=76.00;MQ0=0;MQRankSum=-10.763;QD=125.33;ReadPosRankSum=0.677;VQSLOD=5.0099;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,3561	1/1:2,8:12:33.11:2086,33,0	0/0:33,0:32:96.30:0,96,3010	0/0:30,0:30:78.25:0,78,2311	0/0:26,0:26:78.27:0,78,2857	0/0:18,0:18:51.15:0,51,1905	0/0:13,0:13:39.10:0,39,1309	1/1:8,8:17:33.10:1689,33,0	0/0:12,0:12:36.12:0,36,1354	0/0:16,0:16:45.15:0,45,1670	0/0:15,0:15:42.14:0,42,1599	0/0:19,0:19:57.18:0,57,2163	0/0:21,0:21:63.20:0,63,2319	0/0:6,0:6:18.06:0,18,702	0/0:26,0:26:78.27:0,78,3048	0/0:9,0:9:27.09:0,27,991	0/0:18,0:18:51.15:0,51,1840	0/0:26,0:26:75.26:0,75,2856	1/1:6,3:9:27.09:1602,27,0	1/1:0,4:6:18.02:818,18,0	1/1:4,4:9:15.05:664,15,0	0/0:8,0:8:21.07:0,21,756	0/0:17,0:17:51.18:0,51,1940	0/0:36,0:36:99:0,108,3792	0/0:11,0:11:33.11:0,33,1231	0/0:17,0:17:51.18:0,51,1995	1/1:7,12:23:48.10:2793,48,0	0/0:20,0:20:60.21:0,60,2349
chr10	108275783	.	T	TA	1074.56	PASS	AB=0.895;AC=14;AF=0.250;AN=56;BaseQRankSum=-2.970;DP=560;FS=2.321;HRun=14;HaplotypeScore=74.8210;InbreedingCoeff=0.6144;MQ=71.55;MQ0=2;MQRankSum=-1.924;QD=5.75;ReadPosRankSum=-2.521;VQSLOD=2.1190;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,3:34:10.35:0,10,303	0/1:5,6:11:10.27:44,0,10	0/1:31,0:19:0.92:9,0,1	0/0:10,0:7:5.24:0,5,24	0/0:21,1:27:25.90:0,26,260	0/0:16,0:17:28.48:0,28,175	0/0:11,1:13:5.25:0,5,152	1/1:12,16:28:5.88:278,6,0	0/0:18,0:18:34.56:0,35,224	0/0:24,0:25:33.33:0,33,203	0/0:34,1:35:35.49:0,35,358	0/0:17,0:18:11.31:0,11,175	0/0:15,1:17:10.22:0,10,177	0/0:6,0:6:14.76:0,15,96	0/0:16,1:20:11.44:0,11,179	0/0:16,1:19:22.02:0,22,254	0/0:25,3:29:22.13:0,22,256	0/0:22,0:23:29.99:0,30,226	1/1:11,7:22:10.90:170,11,0	1/1:13,12:23:30.84:258,31,0	1/1:4,9:13:18:158,18,0	0/0:10,0:11:25.65:0,26,159	0/1:17,0:18:14.39:14,0,144	0/0:10,0:10:26.60:0,27,173	0/1:11,1:14:2.41:2,0,90	0/0:20,1:23:42.30:0,42,260	1/1:7,17:23:22.67:314,23,0	0/0:14,1:17:27.61:0,28,165
chr10	108276208	.	AC	A	1426.73	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=9.335;DP=649;FS=30.254;HRun=2;HaplotypeScore=72.0523;InbreedingCoeff=0.8836;MQ=52.31;MQ0=41;MQRankSum=-0.993;QD=15.85;ReadPosRankSum=0.415;VQSLOD=1.9624;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:28:50.40:0,50,763	./.	0/0:30,0:5:15.04:0,15,208	0/0:38,0:10:27.09:0,27,375	0/0:38,0:38:72.23:0,72,1056	0/0:18,0:17:42.12:0,42,591	0/0:32,0:31:84.28:0,84,1259	1/1:4,1:1:2.99:24,3,0	0/0:27,0:26:72.24:0,72,1073	0/0:40,0:38:99:0,108,1600	0/0:12,0:10:27.09:0,27,401	0/0:31,0:31:93.32:0,93,1393	0/0:19,0:19:57.18:0,57,829	0/0:26,0:26:75.25:0,75,1124	0/0:41,0:41:99:0,117,1689	0/0:16,0:16:48.16:0,48,720	0/0:13,0:11:15.02:0,15,202	0/0:17,0:14:27.01:0,27,344	1/1:5,4:2:3.01:39,3,0	1/1:2,5:4:8.16:101,8,0	1/1:10,42:46:76.48:1008,76,0	0/0:17,0:17:45.14:0,45,652	0/0:17,0:16:30.04:0,30,404	0/0:31,0:30:87.29:0,87,1304	0/0:17,0:17:43.39:0,43,631	0/0:32,0:31:90.29:0,90,1313	1/1:3,14:11:16.15:406,16,0	0/0:11,0:11:30.10:0,30,449
chr10	108276335	.	AC	A	5317.65	PASS	AB=0.570;AC=9;AF=0.161;AN=56;BaseQRankSum=8.650;DP=728;FS=0.355;HRun=2;HaplotypeScore=87.2952;InbreedingCoeff=0.6193;MQ=50.96;MQ0=37;MQRankSum=-0.584;QD=20.69;ReadPosRankSum=-2.757;VQSLOD=4.0452;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:13:21.96:0,22,315	0/1:2,13:15:5.78:428,0,6	0/0:28,0:4:9.03:0,9,125	0/0:27,1:7:15.02:0,15,201	0/0:10,0:9:21.07:0,21,313	0/0:21,0:21:45.15:0,45,674	0/0:26,0:25:75.21:0,75,1099	1/1:7,38:31:45.43:1085,45,0	0/0:22,0:21:63.20:0,63,924	0/0:22,0:20:60.20:0,60,882	0/0:9,0:8:24.08:0,24,360	0/0:27,0:27:69.23:0,69,1034	0/0:21,0:19:57.19:0,57,854	0/0:30,0:30:84.28:0,84,1258	0/0:28,0:28:78.26:0,78,1150	0/0:26,0:26:72.24:0,72,1079	0/0:22,0:18:39.11:0,39,558	0/0:13,0:8:21.05:0,21,293	1/1:2,18:19:54.18:701,54,0	1/1:1,30:29:66.21:854,66,0	0/1:21,92:103:99:1739,0,144	0/0:6,0:6:18.06:0,18,270	0/0:12,0:11:27.09:0,27,405	0/0:42,0:41:99:0,120,1796	0/0:14,0:14:39.13:0,39,585	0/0:27,0:26:78.26:0,78,1166	0/1:13,20:31:99:511,0,329	0/0:12,0:12:36.12:0,36,540
chr10	108276946	.	TTG	T	3069.20	PASS	AB=0.988;AC=45;AF=0.833;AN=54;BaseQRankSum=-1.794;DP=414;FS=38.496;HRun=0;HaplotypeScore=62.4638;InbreedingCoeff=0.1379;MQ=35.28;MQ0=34;MQRankSum=-3.362;QD=7.89;ReadPosRankSum=0.605;VQSLOD=1.3637;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,1:20:29.65:202,30,0	1/1:5,0:5:2.25:19,2,0	./.	0/0:12,0:4:3.40:0,3,18	1/1:21,0:20:22.20:179,22,0	1/1:16,0:15:0.11:30,0,0	1/1:10,0:9:24.13:155,24,0	1/1:23,0:19:4.55:171,5,0	1/1:9,0:7:11.42:69,11,0	1/1:16,0:16:31.67:199,32,0	1/1:12,0:10:20.48:135,20,0	1/1:14,0:14:24.73:161,25,0	1/1:7,0:7:13.27:83,13,0	1/1:9,0:10:10.36:82,10,0	1/1:14,0:14:28.21:165,28,0	1/1:12,0:11:16.17:152,16,0	0/1:23,0:18:4.31:84,0,4	0/1:21,0:19:4.96:78,0,5	1/1:20,0:17:12.35:139,12,0	0/1:16,0:12:5.50:84,0,5	0/0:4,0:2:1.55:0,2,4	1/1:1,4:5:2.80:31,3,0	1/1:18,2:18:32.47:273,32,0	1/1:17,1:14:8.93:43,9,0	1/1:16,1:16:26.58:204,27,0	0/1:15,0:15:1.47:77,0,1	0/1:17,0:17:6.42:76,0,6	1/1:23,0:20:38.99:289,39,0
chr10	108277625	.	A	AG	1396.37	PASS	AB=0.840;AC=14;AF=0.250;AN=56;BaseQRankSum=5.737;DP=443;FS=3.333;HRun=2;HaplotypeScore=52.3092;InbreedingCoeff=0.4261;MQ=50.15;MQ0=29;MQRankSum=-2.301;QD=8.26;ReadPosRankSum=1.277;VQSLOD=1.2516;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:15:17.67:118,0,18	1/1:4,1:4:4.24:28,4,0	0/0:19,0:4:8.99:0,9,93	0/0:12,0:3:2.99:0,3,24	0/0:4,0:4:3.01:0,3,37	0/0:11,0:11:18.06:0,18,223	0/0:47,0:45:99:0,108,1252	1/1:7,8:8:24.01:272,24,0	0/0:19,0:18:51.12:0,51,614	0/0:8,0:6:18.06:0,18,221	0/0:6,0:5:6.02:0,6,74	0/0:19,0:18:4.15:0,4,442	0/0:12,0:12:20.92:0,21,240	0/0:22,0:22:44.90:0,45,557	0/0:10,0:10:24.55:0,25,299	0/0:19,0:19:33.11:0,33,568	0/1:40,0:38:44.14:496,0,44	1/1:20,0:20:5.86:42,6,0	1/1:12,7:14:16.03:329,16,0	1/1:5,1:6:3.01:43,3,0	0/1:19,19:33:21.12:125,0,21	0/0:8,0:6:15.05:0,15,184	0/0:2,0:2:3.01:0,3,37	0/0:31,0:31:76.48:0,76,932	0/0:7,0:7:15.05:0,15,186	0/0:10,0:10:27.05:0,27,316	0/1:5,4:8:6.18:108,0,6	0/0:8,0:7:21.07:0,21,256
chr10	108277626	.	GGCAGA	G	1044.56	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=6.544;DP=439;FS=0.000;HRun=0;HaplotypeScore=73.3242;InbreedingCoeff=0.3225;MQ=49.92;MQ0=29;MQRankSum=-3.659;QD=6.22;ReadPosRankSum=1.987;VQSLOD=1.2842;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:16:28.74:113,0,29	1/1:5,0:4:4.24:28,4,0	0/0:19,0:4:8.99:0,9,93	0/0:10,0:1:2.99:0,3,24	0/0:4,0:4:3.01:0,3,37	0/0:11,0:11:21.07:0,21,320	0/0:47,0:45:99:0,112,1332	1/1:15,0:8:23.87:209,24,0	0/0:19,0:18:51.15:0,51,771	0/0:8,0:6:17.94:0,18,173	0/0:6,0:5:6.02:0,6,74	0/0:19,0:18:28.73:0,29,468	0/0:11,0:11:20.99:0,21,283	0/0:23,0:23:53.84:0,54,921	0/0:10,0:10:25.32:0,25,434	0/0:18,0:18:41.17:0,41,592	0/1:39,0:37:27.12:493,0,27	0/1:20,0:20:3.89:34,0,4	1/1:19,0:14:3.49:223,3,0	1/1:2,4:6:3.01:43,3,0	0/1:37,0:32:30.20:30,0,59	0/0:8,0:6:15.01:0,15,207	0/0:2,0:2:3.01:0,3,37	0/0:31,0:31:75.24:0,75,1156	0/0:7,0:7:15.05:0,15,225	0/0:10,0:10:26.98:0,27,373	0/1:9,0:8:27.05:27,0,60	0/0:8,0:7:20.90:0,21,206
chr10	108277627	.	G	GC	2451.71	PASS	AB=0.905;AC=19;AF=0.339;AN=56;BaseQRankSum=1.770;DP=434;FS=0.512;HRun=1;HaplotypeScore=51.5118;InbreedingCoeff=0.6996;MQ=49.79;MQ0=29;MQRankSum=-3.956;QD=13.25;ReadPosRankSum=0.218;VQSLOD=2.3320;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,11:16:1.23:301,1,0	1/1:3,2:4:6.01:71,6,0	0/0:19,0:4:5.98:0,6,59	0/0:10,0:1:3.01:0,3,33	0/0:4,0:4:3.01:0,3,39	0/0:11,0:11:22.28:0,22,245	0/0:43,0:41:99:0,102,1148	1/1:12,3:8:23.56:194,24,0	0/0:19,0:18:51.14:0,51,644	0/0:8,0:6:18.01:0,18,188	0/0:6,0:5:5.61:0,6,77	0/1:17,2:18:44.73:45,0,461	0/0:10,0:10:17.34:0,17,217	0/0:24,0:23:49.94:0,50,627	0/0:10,0:10:24.55:0,25,313	0/0:17,1:18:6.20:0,6,568	1/1:7,32:37:26.77:1193,27,0	1/1:20,0:20:9.49:115,9,0	1/1:13,4:13:35.21:337,35,0	1/1:5,1:6:3:25,3,0	1/1:29,8:32:26.32:206,26,0	0/0:8,0:6:15.03:0,15,179	0/0:2,0:2:3.01:0,3,39	0/0:32,0:32:75.23:0,75,964	0/0:7,0:7:15.05:0,15,195	0/0:10,0:10:27.05:0,27,317	1/1:5,4:8:14.97:155,15,0	0/0:8,0:7:21.01:0,21,226
chr10	108277628	.	CAGAGGCAGAGG	C	2334.09	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=-1.655;DP=429;FS=6.716;HRun=0;HaplotypeScore=103.9539;InbreedingCoeff=0.4508;MQ=49.89;MQ0=29;MQRankSum=-0.742;QD=14.32;ReadPosRankSum=1.937;VQSLOD=1.4184;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:17:31.51:510,32,0	0/1:6,0:5:9.85:62,0,10	0/0:19,0:4:5.98:0,6,59	0/0:10,0:1:3.01:0,3,33	0/0:3,0:3:3.01:0,3,39	0/0:11,0:11:24.97:0,25,512	0/0:43,0:41:92:0,92,1412	1/1:16,0:8:11.95:131,12,0	0/0:19,0:18:48.16:0,48,985	0/0:8,0:6:9.03:0,9,117	0/0:6,0:5:6.02:0,6,78	0/0:19,0:18:45.13:0,45,622	0/0:10,0:10:18.06:0,18,349	0/0:24,0:23:55.69:0,56,1306	0/0:10,0:10:25.90:0,26,604	0/0:18,0:18:49.04:0,49,758	1/1:38,0:36:54.02:1261,54,0	1/1:2,18:20:8.29:120,8,0	0/1:15,0:11:30.74:204,0,31	1/1:6,0:6:3:25,3,0	0/1:35,0:30:86.98:127,0,87	0/0:8,0:6:15.05:0,15,264	0/0:2,0:2:3.01:0,3,39	0/0:32,0:32:78.26:0,78,1516	0/0:7,0:7:15.05:0,15,268	0/0:9,0:9:21.07:0,21,413	0/1:8,0:7:63.31:63,0,187	0/0:8,0:7:12.04:0,12,152
chr10	108277957	.	A	AAG	2374.57	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=-6.865;DP=357;FS=20.310;HRun=0;HaplotypeScore=41.2548;InbreedingCoeff=0.6734;MQ=71.80;MQ0=17;MQRankSum=0.998;QD=17.72;ReadPosRankSum=2.314;VQSLOD=1.5315;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:24:0.33:0,0,47	1/1:1,4:4:5.97:79,6,0	0/0:59,0:14:18.91:0,19,133	0/0:51,0:13:6.83:0,7,118	0/0:4,0:4:11.97:0,12,122	0/0:10,0:10:26.99:0,27,275	0/0:7,0:7:20.88:0,21,235	1/1:3,18:23:46.87:831,47,0	0/0:11,0:10:27.05:0,27,325	0/0:3,0:3:9.03:0,9,126	0/0:2,0:2:5.98:0,6,60	0/0:4,0:4:12.03:0,12,146	0/0:2,0:2:6.02:0,6,84	0/0:7,0:7:20.90:0,21,220	0/0:4,0:2:5.91:0,6,58	0/0:6,0:6:18.02:0,18,225	0/1:23,0:21:18.46:18,0,68	0/0:18,0:16:21.67:0,22,208	1/1:6,11:15:38.25:490,38,0	1/1:2,9:10:20.83:248,21,0	1/1:0,11:12:18.06:280,18,0	0/0:1,0:1:3.01:0,3,42	0/0:1,0:1:3.01:0,3,42	0/0:4,0:4:12.03:0,12,153	0/0:6,0:6:11.82:0,12,102	0/0:15,0:15:41.11:0,41,419	1/1:0,16:16:39.13:605,39,0	0/0:7,0:7:15.02:0,15,174
chr10	108281381	.	AC	A	3903.43	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.378;DP=650;FS=10.076;HRun=5;HaplotypeScore=62.4453;InbreedingCoeff=0.9983;MQ=77.45;MQ0=0;MQRankSum=-3.009;QD=29.35;ReadPosRankSum=-1.794;VQSLOD=2.9809;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,1332	1/1:0,7:7:18.05:204,18,0	0/0:23,0:23:66.20:0,66,883	0/0:23,0:23:51.54:0,52,809	0/0:24,0:24:69.23:0,69,942	0/0:27,0:27:75.25:0,75,1022	0/0:13,0:13:33.11:0,33,452	1/1:1,33:34:99:1114,99,0	0/0:21,0:21:51.14:0,51,677	0/0:28,0:28:81.26:0,81,1088	0/0:22,0:22:57.18:0,57,764	0/0:21,0:21:60.20:0,60,820	0/0:16,0:16:42.10:0,42,553	0/0:23,0:23:60.20:0,60,819	0/0:42,0:42:99:0,120,1635	0/0:22,0:22:63.18:0,63,842	0/0:26,0:26:66.20:0,66,886	0/0:21,0:21:60.16:0,60,795	1/1:1,18:19:44.67:510,45,0	1/1:1,25:26:66.19:749,66,0	1/1:1,18:19:45.13:510,45,0	0/0:20,0:20:60.19:0,60,805	0/0:22,0:22:63.21:0,63,861	0/0:21,0:21:51.16:0,51,680	0/0:20,0:20:54.18:0,54,738	0/0:27,0:27:78.25:0,78,1051	1/1:2,26:28:72.20:817,72,0	0/0:19,0:19:57.12:0,57,756
chr10	108281544	.	C	CTT	2287.79	PASS	AB=0.791;AC=18;AF=0.321;AN=56;BaseQRankSum=7.980;DP=578;FS=0.822;HRun=13;HaplotypeScore=84.4824;InbreedingCoeff=0.7995;MQ=61.54;MQ0=7;MQRankSum=-4.895;QD=9.53;ReadPosRankSum=-4.349;VQSLOD=1.0306;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,3:39:14.82:265,0,15	1/1:3,6:9:17.96:202,18,0	0/0:14,0:8:16.68:0,17,99	0/0:13,0:6:2.94:0,3,26	0/1:30,0:30:1.95:2,0,315	0/0:22,0:23:32.85:0,33,374	0/0:9,0:10:5.57:0,6,125	1/1:27,5:30:37.85:310,38,0	0/0:17,0:17:35.81:0,36,305	0/0:27,0:27:67.99:0,68,601	0/0:15,0:15:7.29:0,7,207	0/0:16,0:15:38.62:0,39,320	0/0:12,0:12:20.91:0,21,184	0/0:14,0:13:29.82:0,30,245	0/0:28,0:30:44.62:0,45,430	0/0:22,0:22:44.43:0,44,417	1/1:9,0:24:38.56:172,39,0	1/1:9,0:19:40.64:164,41,0	1/1:8,14:23:57.25:538,57,0	1/1:10,16:28:10.43:356,10,0	1/1:5,5:10:17.45:168,17,0	0/0:17,0:19:19.24:0,19,208	0/0:22,0:25:47.75:0,48,460	0/0:23,0:24:41.36:0,41,384	0/0:23,0:26:47.09:0,47,431	0/0:18,0:19:29.58:0,30,296	1/1:6,15:22:24.54:314,25,0	0/0:8,0:8:17.92:0,18,158
chr10	108286213	.	GTAACGC	G	6271.76	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.284;DP=758;FS=0.411;HRun=0;HaplotypeScore=165.4843;InbreedingCoeff=0.9850;MQ=83.67;MQ0=0;MQRankSum=-12.754;QD=48.62;ReadPosRankSum=-2.110;VQSLOD=3.9261;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,169,6128	1/1:1,6:7:18.06:440,18,0	0/0:32,0:32:96.11:0,96,2756	0/0:17,0:17:41.35:0,41,1359	0/0:30,0:30:90.29:0,90,3022	0/0:19,0:19:57.20:0,57,2043	0/0:30,0:29:87.26:0,87,2870	1/1:4,22:26:60.18:1307,60,0	0/0:31,0:31:90.29:0,90,3133	0/0:24,0:24:72.24:0,72,2524	0/0:18,0:18:54.17:0,54,1863	0/0:41,0:41:99:0,123,4234	0/0:30,0:30:90.28:0,90,3018	0/0:46,0:46:99:0,135,4926	0/0:26,0:26:75.26:0,75,2680	0/0:29,0:29:87.30:0,87,3149	0/0:34,0:34:93.32:0,93,3387	0/0:33,0:33:96.31:0,96,3279	1/1:4,23:27:69.24:1648,69,0	1/1:1,7:8:18.06:440,18,0	1/1:10,26:36:33.58:716,34,0	0/0:23,0:23:69.24:0,69,2467	0/0:16,0:16:48.16:0,48,1738	0/0:34,0:34:99:0,102,3282	0/0:23,0:23:66.16:0,66,2308	0/0:33,0:33:96.32:0,96,3326	1/1:0,25:25:72.25:1721,72,0	0/0:3,0:3:9.03:0,9,270
chr10	108287903	.	C	CAGTT	9544.81	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.276;DP=806;FS=3.602;HRun=0;HaplotypeScore=126.9843;InbreedingCoeff=0.9998;MQ=88.27;MQ0=1;MQRankSum=-8.277;QD=57.85;ReadPosRankSum=-0.184;VQSLOD=6.2512;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,157,2853	1/1:2,10:11:30.10:786,30,0	0/0:37,0:36:86.97:0,87,1546	0/0:24,0:24:34.05:0,34,902	0/0:23,0:23:66.23:0,66,1191	0/0:19,0:19:54.19:0,54,985	0/0:26,0:26:78.27:0,78,1425	1/1:6,26:36:90.28:2226,90,0	0/0:35,0:35:99:0,105,1925	0/0:32,0:32:84.25:0,84,1407	0/0:17,0:17:45.15:0,45,821	0/0:38,0:38:99:0,102,1839	0/0:28,0:28:72.25:0,72,1308	0/0:30,0:30:78.27:0,78,1435	0/0:46,0:46:99:0,129,2373	0/0:24,0:24:60.19:0,60,1067	0/0:35,0:35:99:0,102,1876	0/0:25,0:25:72.25:0,72,1325	1/1:5,19:24:63.20:1538,63,0	1/1:3,17:20:45.11:1085,45,0	1/1:9,35:45:81.22:2053,81,0	0/0:19,0:19:54.19:0,54,993	0/0:19,0:19:57.20:0,57,1038	0/0:44,0:44:99:0,117,2121	0/0:17,0:17:45.15:0,45,828	0/0:31,0:31:81.28:0,81,1476	1/1:3,23:28:75.26:1856,75,0	0/0:16,0:16:48.16:0,48,882
chr10	108288548	.	G	GT	9598.23	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-16.549;DP=695;FS=12.044;HRun=1;HaplotypeScore=66.8667;InbreedingCoeff=0.9998;MQ=78.45;MQ0=0;MQRankSum=-4.872;QD=39.50;ReadPosRankSum=0.861;VQSLOD=4.5672;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,46:51:99:1933,129,0	1/1:0,10:10:27.05:380,27,0	0/0:17,0:17:50.71:0,51,601	0/0:20,0:20:50.39:0,50,651	0/0:23,0:23:69.22:0,69,896	0/0:20,0:20:57.14:0,57,721	0/0:29,0:29:84.24:0,84,1062	1/1:3,26:29:78.26:1167,78,0	0/0:24,0:24:69.22:0,69,894	0/0:34,0:34:99:0,102,1325	0/0:18,0:18:54.18:0,54,700	0/0:25,0:25:72.19:0,72,904	0/0:22,0:22:57.17:0,57,719	0/0:20,0:20:57.17:0,57,726	0/0:23,0:23:66.21:0,66,857	0/0:25,0:24:66.21:0,66,857	1/1:0,38:38:99:1574,105,0	1/1:0,16:16:42.14:629,42,0	1/1:1,27:28:78.24:1128,78,0	1/1:2,17:19:45.15:675,45,0	1/1:1,32:33:93.32:1394,93,0	0/0:24,0:24:72.23:0,72,934	0/0:34,0:34:96.29:0,96,1218	0/0:30,0:30:87.23:0,87,1095	0/0:26,0:26:78.23:0,78,984	0/0:25,0:25:75.24:0,75,974	1/1:3,16:19:48.16:719,48,0	0/0:13,0:13:39.13:0,39,506
chr10	108288850	.	T	TTTTTG	4864.89	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-8.761;DP=649;FS=3.507;HRun=0;HaplotypeScore=117.7505;InbreedingCoeff=0.9855;MQ=64.63;MQ0=5;MQRankSum=-0.918;QD=33.78;ReadPosRankSum=-3.476;VQSLOD=4.1635;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:56.36:0,56,1562	1/1:1,8:9:20.96:444,21,0	0/0:21,0:14:12.04:0,12,223	0/0:17,0:12:18.05:0,18,319	0/0:13,0:13:22.07:0,22,314	0/0:18,0:18:39.41:0,39,593	0/0:31,0:31:66.14:0,66,1176	1/1:12,16:32:60.13:1180,60,0	0/0:26,0:26:66.17:0,66,1068	0/0:15,0:15:36.09:0,36,583	0/0:19,0:19:44.55:0,45,739	0/0:17,0:17:39.12:0,39,693	0/0:24,0:24:63.18:0,63,1075	0/0:17,0:17:45.12:0,45,706	0/0:26,0:26:48.10:0,48,732	0/0:20,0:20:48.12:0,48,823	0/0:37,0:37:84.26:0,84,1479	0/0:28,0:28:60.93:0,61,1188	1/1:11,13:27:27.50:1114,28,0	1/1:6,9:19:29.96:598,30,0	1/1:7,13:22:18.06:512,18,0	0/0:15,0:15:15.35:0,15,468	0/0:18,0:18:33.11:0,33,611	0/0:30,0:30:75.21:0,75,1331	0/0:23,0:23:55.55:0,56,814	0/0:36,0:36:81.99:0,82,1315	1/1:9,15:31:35.87:1018,36,0	0/0:15,0:15:30.10:0,30,561
chr10	108292366	.	GACCCGTGAACAGCTACACCCGTGAACAGCTAC	G	636.23	PASS	AC=4;AF=0.080;AN=50;BaseQRankSum=3.297;DP=567;FS=2.324;HRun=0;HaplotypeScore=426.4250;InbreedingCoeff=0.7802;MQ=74.64;MQ0=0;MQRankSum=-1.539;QD=37.43;ReadPosRankSum=-0.241;VQSLOD=0.4323;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:63.22:0,63,5772	1/1:2,4:6:6.02:488,6,0	0/0:23,0:23:30.09:0,30,1286	0/0:20,0:20:13.64:0,14,502	0/0:14,0:13:33.09:0,33,3466	0/0:13,0:13:33.11:0,33,3578	0/0:34,0:34:60.21:0,60,5454	./.	0/0:23,0:23:39.13:0,39,4950	0/0:18,0:18:39.13:0,39,3365	0/0:11,0:11:21.07:0,21,2310	0/0:23,0:27:32.67:0,33,1564	0/0:14,0:14:30.10:0,30,4088	0/0:19,0:19:45.15:0,45,4597	0/0:24,0:24:45.15:0,45,4945	0/0:23,0:23:45.15:0,45,5816	0/0:39,0:39:81.72:0,82,5979	0/0:35,0:35:64.10:0,64,5297	1/1:10,1:11:3.01:244,3,0	./.	0/0:49,0:49:8.21:0,8,21	0/0:18,0:18:24.08:0,24,2624	0/0:14,0:14:27.09:0,27,2630	0/0:28,0:28:69.24:0,69,7321	0/0:15,0:15:36.12:0,36,4612	0/0:18,0:18:42.14:0,42,3601	./.	0/0:7,0:7:15.05:0,15,1644
chr10	108292899	.	AGAGAGAGAG	A	1428.42	PASS	AB=0.994;AC=14;AF=0.250;AN=56;BaseQRankSum=2.842;DP=500;FS=0.000;HRun=0;HaplotypeScore=115.8203;InbreedingCoeff=0.7482;MQ=57.35;MQ0=31;MQRankSum=-6.066;QD=8.98;ReadPosRankSum=-3.231;VQSLOD=1.3190;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:21:22.53:0,23,1017	1/1:2,0:5:15:325,15,0	0/0:61,0:18:12.20:0,12,702	0/1:81,0:19:13.18:13,0,898	0/0:14,0:16:19.96:0,20,845	0/0:9,0:9:21.02:0,21,903	0/0:18,0:16:39.08:0,39,1485	1/1:8,13:19:38.79:336,39,0	0/0:10,0:9:5.68:0,6,265	0/0:23,0:21:50.47:0,50,1666	0/0:3,0:4:6.01:0,6,262	0/0:9,0:9:18.02:0,18,732	0/0:12,0:12:17.69:0,18,683	0/1:10,0:9:1.26:1,0,493	0/0:10,0:9:14.83:0,15,514	0/0:11,0:11:27:0,27,1201	0/0:11,0:11:23.37:0,23,668	0/0:8,0:7:9.03:0,9,212	1/1:2,6:6:12.89:227,13,0	1/1:2,1:19:18.48:402,18,0	1/1:3,0:4:5.66:33,6,0	0/0:10,0:10:19.72:0,20,738	0/0:12,0:12:29.71:0,30,1136	0/0:16,0:16:20.79:0,21,934	0/0:18,0:17:38.53:0,39,1544	0/0:22,0:22:53.91:0,54,2237	1/1:2,5:7:9.92:268,10,0	0/0:35,0:31:74.26:0,74,3071
chr10	108293037	.	TAC	T	188.04	PASS	AB=0.944;AC=11;AF=0.220;AN=50;BaseQRankSum=0.397;DP=541;FS=3.148;HRun=0;HaplotypeScore=81.9839;InbreedingCoeff=-0.3285;MQ=63.53;MQ0=10;MQRankSum=0.721;QD=1.14;ReadPosRankSum=-0.496;VQSLOD=1.5946;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,1:43:13.32:0,13,319	0/0:3,0:4:5.65:0,6,31	./.	./.	0/1:9,0:9:21.10:21,0,124	0/0:23,0:23:28.59:0,29,363	0/0:32,4:36:2.84:0,3,430	0/0:33,0:30:27.04:0,27,233	0/1:14,0:13:8:8,0,166	0/1:14,1:15:28.85:29,0,155	0/0:11,3:14:15.05:0,15,221	0/1:16,0:16:46.63:52,0,47	0/1:22,0:22:20.39:20,0,430	0/1:13,0:13:9.92:10,0,224	0/1:21,3:25:68.62:69,0,437	0/1:9,4:13:24.51:25,0,81	0/0:10,0:20:15:0,15,135	0/0:15,0:26:21.03:0,21,224	0/0:16,0:15:3.01:0,3,39	0/0:13,0:13:2.90:0,3,16	0/0:20,0:20:3.45:0,3,23	0/0:13,0:13:18.04:0,18,249	0/1:7,2:9:36.25:58,0,36	0/0:37,0:37:69.65:0,70,973	0/1:14,0:14:22.35:22,0,205	0/1:15,0:15:8.14:8,0,240	0/0:12,0:12:6.81:0,7,41	./.
chr10	108293234	.	G	GCA	7299.36	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-14.325;DP=728;FS=5.381;HRun=0;HaplotypeScore=84.5946;InbreedingCoeff=0.9994;MQ=86.38;MQ0=0;MQRankSum=-2.854;QD=49.66;ReadPosRankSum=-3.372;VQSLOD=4.4566;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,141,1981	1/1:0,10:10:30.10:550,30,0	0/0:27,0:27:61.75:0,62,837	0/0:27,0:27:72.23:0,72,995	0/0:14,0:14:39.13:0,39,559	0/0:22,0:22:60.17:0,60,838	0/0:18,0:18:51.14:0,51,692	1/1:2,29:31:84.27:1497,84,0	0/0:23,0:23:66.21:0,66,928	0/0:38,0:38:99:0,99,1398	0/0:11,0:11:23.92:0,24,343	0/0:26,0:26:78.26:0,78,1115	0/0:36,0:36:99:0,102,1454	0/0:27,0:27:81.27:0,81,1161	0/0:31,0:31:90.30:0,90,1290	0/0:15,0:15:45.15:0,45,645	0/0:24,0:24:66.20:0,66,927	0/0:28,0:28:78.24:0,78,1098	1/1:7,21:29:78.22:1351,78,0	1/1:0,25:25:66.23:1208,66,0	1/1:0,37:37:99:1980,108,0	0/0:32,0:32:87.28:0,87,1226	0/0:20,0:20:54.17:0,54,747	0/0:32,0:32:93.30:0,93,1315	0/0:23,0:23:63.21:0,63,903	0/0:25,0:25:72.24:0,72,1031	1/1:1,13:15:39.13:713,39,0	0/0:31,0:31:93.31:0,93,1333
chr10	108294327	.	A	AC	1517.29	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.726;DP=564;FS=5.948;HRun=0;HaplotypeScore=103.5682;InbreedingCoeff=0.9935;MQ=68.95;MQ0=15;MQRankSum=-8.238;QD=13.67;ReadPosRankSum=2.527;VQSLOD=4.9645;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:41.41:0,41,394	1/1:3,4:7:19.20:129,19,0	0/0:45,0:16:31.71:0,32,241	0/0:35,0:18:17.46:0,17,203	0/0:26,0:25:42.57:0,43,424	0/0:19,0:19:51:0,51,398	0/0:16,0:16:39.98:0,40,332	1/1:23,6:29:70.30:510,70,0	0/0:14,1:16:29.79:0,30,353	0/0:13,0:13:26.43:0,26,196	0/0:23,0:22:47.03:0,47,351	0/0:26,0:25:50.71:0,51,372	0/0:10,0:10:25.37:0,25,168	0/0:18,0:18:42.87:0,43,352	0/0:24,0:24:63.03:0,63,540	0/0:23,0:23:57.99:0,58,469	0/0:14,0:14:28.74:0,29,233	0/0:19,0:19:51.31:0,51,384	1/1:15,2:16:19.35:173,19,0	1/1:14,8:22:55.20:369,55,0	1/1:10,0:10:22.77:148,23,0	0/0:12,0:12:31.81:0,32,290	0/0:10,0:10:29.23:0,29,233	0/0:9,0:9:23.56:0,24,216	0/0:17,0:17:37.72:0,38,288	0/0:29,0:28:68.61:0,69,509	1/1:18,7:25:58.75:375,59,0	0/0:19,0:16:33.14:0,33,243
chr10	108294331	.	A	ACAAC	1195.94	PASS	AB=0.944;AC=10;AF=0.179;AN=56;BaseQRankSum=9.176;DP=552;FS=5.652;HRun=0;HaplotypeScore=135.4612;InbreedingCoeff=0.6752;MQ=69.57;MQ0=15;MQRankSum=-9.504;QD=11.39;ReadPosRankSum=4.620;VQSLOD=2.4514;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:83.09:0,83,1046	1/1:3,4:7:7.87:182,8,0	0/0:48,0:17:30.02:0,30,322	0/0:38,0:19:31.83:0,32,307	0/0:23,0:22:60.16:0,60,942	0/0:19,0:19:56.60:0,57,802	0/0:18,0:18:48.05:0,48,676	1/1:24,5:29:8.80:290,9,0	0/0:15,0:15:39.12:0,39,636	0/0:11,0:11:29.40:0,29,444	0/0:23,0:22:63.12:0,63,881	0/0:25,0:24:52.98:0,53,626	0/0:12,0:12:32.44:0,32,419	0/0:17,0:17:45.06:0,45,582	0/0:21,0:21:60.15:0,60,956	0/0:22,0:22:56.76:0,57,835	0/0:14,0:14:29.07:0,29,355	0/0:17,0:17:49.58:0,50,594	0/1:14,2:15:20.75:112,0,21	1/1:14,7:20:9.41:374,9,0	0/1:9,0:9:5.67:26,0,6	0/0:10,0:10:30.09:0,30,504	0/0:8,0:8:24.08:0,24,372	0/0:8,0:8:21.54:0,22,335	0/0:17,0:17:48.12:0,48,663	0/0:30,0:29:81.07:0,81,1160	1/1:17,5:23:1.70:358,2,0	0/0:17,0:14:35.74:0,36,453
chr10	108294467	.	CAT	C	311.49	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=6.275;DP=627;FS=6.233;HRun=0;HaplotypeScore=79.5087;InbreedingCoeff=0.0893;MQ=55.98;MQ0=22;MQRankSum=-0.628;QD=1.76;ReadPosRankSum=-3.402;VQSLOD=-0.2356;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:26.79:0,27,951	0/1:10,0:9:61.82:62,0,107	1/1:15,4:4:8.86:58,9,0	0/1:28,0:13:58.82:67,0,59	0/0:17,0:16:25.08:0,25,307	0/0:23,0:23:45.82:0,46,581	0/0:36,0:35:70.75:0,71,959	0/1:30,0:26:99:143,0,265	0/0:22,0:22:55.71:0,56,595	0/0:20,0:18:6.79:0,7,322	0/0:15,0:15:16.77:0,17,414	0/0:17,0:15:2.98:0,3,288	0/0:9,0:9:20.84:0,21,223	0/0:13,0:11:30:0,30,426	0/0:17,0:17:34.63:0,35,499	0/0:23,0:23:29.32:0,29,654	0/0:33,0:33:33.42:0,33,1046	0/0:25,0:25:50.06:0,50,738	0/1:15,0:13:50.37:50,0,204	0/0:12,0:12:14.80:0,15,150	0/1:75,0:72:61.93:62,0,469	0/0:12,0:12:11.52:0,12,348	0/0:10,0:10:24.01:0,24,322	0/0:22,1:23:62.66:0,63,744	0/0:15,3:17:0.89:0,1,524	0/0:25,0:25:24.08:0,24,791	0/0:21,0:20:12.22:0,12,311	0/0:14,0:14:35.31:0,35,353
chr10	108294469	.	T	TAC	1253.51	PASS	AB=0.610;AC=9;AF=0.161;AN=56;BaseQRankSum=-1.519;DP=626;FS=0.587;HRun=0;HaplotypeScore=80.0044;InbreedingCoeff=0.4758;MQ=56.15;MQ0=21;MQRankSum=-0.569;QD=7.33;ReadPosRankSum=-1.671;VQSLOD=2.9096;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:38.44:0,38,862	1/1:9,0:8:12.04:177,12,0	0/0:16,0:4:2.44:0,2,6	0/0:27,0:12:7.55:0,8,103	0/0:17,0:16:24.07:0,24,276	0/0:22,0:22:44.78:0,45,482	0/0:36,0:35:53.85:0,54,609	1/1:32,0:28:0.14:321,0,0	0/0:22,0:22:41.33:0,41,449	0/0:21,0:19:35.77:0,36,384	0/0:15,0:15:32.77:0,33,365	0/0:18,0:16:18.52:0,19,211	0/0:8,0:8:15.04:0,15,173	0/0:14,0:12:18.92:0,19,203	0/0:17,0:17:39.11:0,39,447	0/0:21,0:21:45.59:0,46,520	0/0:32,0:33:69.60:0,70,782	0/0:25,0:25:43.96:0,44,518	1/1:8,10:16:27.05:326,27,0	0/1:4,9:14:18.87:42,0,19	0/1:29,46:73:66.24:341,0,66	0/0:14,0:14:22.41:0,22,240	0/0:9,0:9:21.06:0,21,246	0/0:23,0:23:49.37:0,49,556	0/0:19,0:18:38.85:0,39,437	0/0:24,0:24:40.14:0,40,562	0/1:9,13:21:17.73:191,0,18	0/0:11,0:11:33.08:0,33,371
chr10	108298149	.	G	GTCCT	4181.04	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-6.089;DP=524;FS=4.042;HRun=0;HaplotypeScore=88.3648;InbreedingCoeff=0.9753;MQ=70.86;MQ0=2;MQRankSum=-3.968;QD=38.71;ReadPosRankSum=-3.047;VQSLOD=3.1631;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:54.18:0,54,864	1/1:6,7:13:24.08:564,24,0	0/0:17,0:16:21.75:0,22,285	0/0:12,0:10:6.02:0,6,84	0/0:34,0:34:87.30:0,87,1431	0/0:14,0:14:33.11:0,33,545	0/0:15,0:15:33.09:0,33,518	1/1:17,11:31:48.14:1034,48,0	0/0:15,0:15:39.13:0,39,643	0/0:18,0:18:39.13:0,39,638	0/0:19,0:19:54.18:0,54,886	0/0:23,0:23:51.17:0,51,814	0/0:12,0:12:27.09:0,27,446	0/0:19,0:19:39.12:0,39,616	0/0:25,0:25:54.18:0,54,888	0/0:13,0:13:30.10:0,30,495	0/0:17,0:17:24.08:0,24,396	0/0:30,0:30:42.09:0,42,643	1/1:11,10:21:39.10:804,39,0	1/1:3,10:13:30.06:681,30,0	1/1:4,9:12:21.07:515,21,0	0/0:12,0:12:30.10:0,30,489	0/0:20,0:20:45.15:0,45,743	0/0:18,0:18:36.12:0,36,588	0/0:14,0:14:27.09:0,27,443	0/0:26,0:26:57.19:0,57,930	1/1:9,7:16:24.08:583,24,0	0/0:12,0:12:30.10:0,30,495
chr10	108298192	.	GTTTT	G	1514.70	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=0.771;DP=616;FS=29.354;HRun=15;HaplotypeScore=111.8884;InbreedingCoeff=0.9050;MQ=61.98;MQ0=8;MQRankSum=0.408;QD=11.56;ReadPosRankSum=5.731;VQSLOD=-0.6647;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,33:40:56.59:742,57,0	0/0:5,0:10:16.03:0,16,195	0/1:41,0:11:0.20:0,0,103	0/0:38,0:15:30.70:0,31,297	0/0:25,0:26:56.58:0,57,929	0/0:19,0:21:48.12:0,48,744	0/0:13,0:15:42.08:0,42,699	0/0:33,0:33:63.53:0,64,1056	0/0:14,0:14:39.02:0,39,666	0/0:19,0:21:54.08:0,54,963	0/0:26,0:26:45.10:0,45,835	0/0:14,0:16:30:0,30,352	0/0:15,0:14:38.73:0,39,564	0/0:15,0:15:40.37:0,40,773	0/0:8,0:17:48.11:0,48,621	0/0:10,0:10:27.07:0,27,475	1/1:2,18:20:24.06:327,24,0	1/1:6,22:29:46.01:587,46,0	0/0:26,0:26:47.69:0,48,642	0/0:16,0:18:48.11:0,48,869	0/0:14,0:13:24.04:0,24,347	0/0:14,0:16:40.02:0,40,768	0/0:20,0:23:48.06:0,48,853	0/0:16,0:19:42.14:0,42,817	0/0:15,0:16:41.91:0,42,645	0/0:34,0:33:71.99:0,72,1168	0/0:17,0:18:45.04:0,45,828	0/0:18,0:19:49.74:0,50,644
chr10	108298528	.	GTTA	G	2118.94	PASS	AB=0.672;AC=44;AF=0.846;AN=52;BaseQRankSum=-1.803;DP=274;FS=10.370;HRun=0;HaplotypeScore=51.7150;InbreedingCoeff=-0.0610;MQ=75.77;MQ0=1;MQRankSum=-1.747;QD=8.51;ReadPosRankSum=-0.394;VQSLOD=1.3156;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:21:17.86:126,18,0	1/1:0,0:4:5.95:42,6,0	./.	./.	0/1:5,2:7:27.88:50,0,28	0/1:8,15:23:0.27:413,0,0	1/1:3,0:3:3:25,3,0	0/1:11,0:35:7.53:8,0,71	1/1:2,4:5:9.03:123,9,0	1/1:6,2:8:6.02:81,6,0	1/1:6,2:8:3.01:41,3,0	1/1:3,2:5:6.02:82,6,0	1/1:2,4:6:9.03:123,9,0	1/1:7,2:9:3.01:41,3,0	1/1:5,4:9:6.02:82,6,0	1/1:1,3:4:6.02:82,6,0	1/1:10,0:10:5.52:21,6,0	0/1:9,0:10:13.44:18,0,13	0/1:4,0:13:14.03:33,0,14	0/1:1,0:5:7.09:31,0,7	0/0:8,0:8:3.41:0,3,26	1/1:6,0:6:6.02:81,6,0	1/1:5,2:7:2.84:41,3,0	1/1:3,1:4:3.01:41,3,0	1/1:3,7:10:6.02:82,6,0	1/1:12,6:18:18.05:229,18,0	1/1:2,0:7:8.93:63,9,0	1/1:3,8:11:21.07:286,21,0
chr10	108298900	.	TTC	T	492.08	PASS	AB=0.795;AC=12;AF=0.214;AN=56;BaseQRankSum=-0.238;DP=352;FS=21.408;HRun=0;HaplotypeScore=49.9686;InbreedingCoeff=0.6620;MQ=48.21;MQ0=19;MQRankSum=-2.549;QD=6.15;ReadPosRankSum=-3.558;VQSLOD=0.1404;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:16:20.73:0,21,173	1/1:6,0:5:4.13:50,4,0	0/0:7,0:2:3.45:0,3,24	0/0:18,0:7:8.98:0,9,100	0/0:10,1:10:19.20:0,19,144	0/0:16,0:15:26.15:0,26,230	0/0:15,1:16:23.19:0,23,342	1/1:28,0:25:34.24:269,34,0	0/0:9,0:7:10.95:0,11,71	0/0:15,0:15:8.71:0,9,189	0/0:6,0:6:1.69:0,2,21	0/0:8,0:8:12.88:0,13,103	0/0:11,0:10:17.78:0,18,145	0/1:7,0:7:1.55:2,0,43	0/0:8,0:8:5.58:0,6,36	0/0:4,0:4:10.65:0,11,59	0/0:25,0:22:24.23:0,24,253	0/0:17,0:14:24.92:0,25,207	1/1:9,0:8:16.61:131,17,0	1/1:11,0:11:9.54:100,10,0	1/1:6,0:6:11.56:88,12,0	0/0:10,0:9:22.41:0,22,214	0/0:10,0:9:4.64:0,5,76	0/0:14,0:12:14.43:0,14,164	0/0:18,0:18:16.01:0,16,405	0/0:13,0:12:19.12:0,19,166	0/1:4,9:13:2.33:13,0,2	0/0:17,0:16:29.88:0,30,278
chr10	108300420	.	AAGCAGGGTGTGGTGGTTACAGATGACTTAATCCC	A	5100.94	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=7.579;DP=713;FS=2.975;HRun=0;HaplotypeScore=561.7066;InbreedingCoeff=0.9206;MQ=83.72;MQ0=0;MQRankSum=-6.901;QD=69.88;ReadPosRankSum=3.566;VQSLOD=0.8092;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,129,16321	1/1:6,3:7:3.01:266,3,0	0/0:24,0:24:63.22:0,63,3999	0/0:27,0:27:75.26:0,75,5460	0/0:32,0:32:84.29:0,84,10375	0/0:21,0:21:60.21:0,60,8000	0/0:31,0:31:90.30:0,90,11576	./.	0/0:30,0:30:84.29:0,84,11627	0/0:33,0:33:84.28:0,84,9613	0/0:20,0:20:51.16:0,51,4994	0/0:35,0:35:99:0,99,10976	0/0:29,0:29:81.28:0,81,9845	0/0:21,0:21:63.22:0,63,8058	0/0:25,0:25:75.26:0,75,9722	0/0:25,0:25:75.26:0,75,10560	0/0:52,0:52:99:0,135,16256	0/0:21,0:21:57.20:0,57,7668	1/1:9,6:15:18.06:1383,18,0	1/1:8,6:14:12.04:1062,12,0	1/1:8,8:16:6.02:531,6,0	0/0:32,0:32:78.24:0,78,8562	0/0:27,0:27:66.23:0,66,7429	0/0:21,0:21:63.20:0,63,7653	0/0:19,0:19:54.15:0,54,6301	0/0:32,0:32:87.29:0,87,10189	1/1:11,8:19:21.07:1859,21,0	0/0:20,0:20:48.16:0,48,5540
chr10	108301040	.	T	TC	5268.61	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-14.856;DP=598;FS=7.477;HRun=3;HaplotypeScore=58.1684;InbreedingCoeff=0.9793;MQ=84.45;MQ0=0;MQRankSum=-3.225;QD=33.77;ReadPosRankSum=-1.098;VQSLOD=4.5990;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,135,1617	1/1:1,6:7:18.06:252,18,0	0/0:21,0:21:59.92:0,60,666	0/0:19,0:19:8.93:0,9,485	0/0:15,0:15:39.12:0,39,468	0/0:15,0:15:45.14:0,45,540	0/0:24,0:24:66.18:0,66,771	1/1:5,33:38:96.24:1325,96,0	0/0:25,0:25:72.21:0,72,852	0/0:18,0:18:54.16:0,54,638	0/0:13,0:13:33.03:0,33,378	0/0:25,0:25:72.21:0,72,854	0/0:18,0:18:45.12:0,45,528	0/0:15,0:15:45.14:0,45,540	0/0:14,0:14:42.13:0,42,504	0/0:21,0:21:63.17:0,63,734	0/0:40,0:40:99:0,108,1271	0/0:23,0:23:60.15:0,60,704	1/1:5,17:22:47.83:672,48,0	1/1:1,21:22:57.19:793,57,0	1/1:1,42:43:99:1512,108,0	0/0:8,0:8:21.06:0,21,252	0/0:11,0:11:33.08:0,33,383	0/0:28,0:28:78.22:0,78,922	0/0:12,0:12:36.10:0,36,421	0/0:21,0:21:60.18:0,60,720	1/1:1,23:24:51.06:714,51,0	0/0:4,0:4:12.04:0,12,144
chr10	108303190	.	AACCACCACCACCACCACCACCACCACC	A	2698.28	PASS	AB=1.000;AC=13;AF=0.250;AN=52;BaseQRankSum=5.156;DP=307;FS=1.478;HRun=0;HaplotypeScore=214.1023;InbreedingCoeff=0.5476;MQ=77.78;MQ0=7;MQRankSum=-3.939;QD=21.94;ReadPosRankSum=1.250;VQSLOD=2.5860;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:99:121,0,554	0/1:7,0:7:13.42:146,0,13	0/0:22,0:17:5.71:0,6,206	0/0:23,0:15:5.15:0,5,59	0/0:7,0:7:3.01:0,3,340	0/0:12,0:11:15.05:0,15,1179	0/0:17,0:17:33:0,33,2148	1/1:9,7:16:17.94:215,18,0	0/0:12,0:12:30.07:0,30,2092	./.	0/0:4,0:4:9.03:0,9,558	0/0:9,0:9:12.03:0,12,908	0/0:7,0:7:18.06:0,18,2174	0/0:16,0:16:33.11:0,33,3105	0/0:12,0:12:27.08:0,27,1793	0/0:7,0:7:12.04:0,12,245	0/1:12,0:12:5.28:5,0,156	0/0:8,0:8:9.01:0,9,126	1/1:8,8:15:27.04:723,27,0	1/1:3,0:3:5.89:183,6,0	1/1:28,0:24:30.94:716,31,0	0/0:5,0:5:9.03:0,9,805	0/0:3,0:3:3.01:0,3,323	0/0:9,0:9:21.07:0,21,1610	0/0:3,0:3:9.03:0,9,987	./.	1/1:18,0:18:24.06:757,24,0	0/0:7,0:7:21.07:0,21,2205
chr10	108303212	.	ACC	A	530.79	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=6.787;DP=275;FS=0.704;HRun=2;HaplotypeScore=71.7553;InbreedingCoeff=0.7389;MQ=48.12;MQ0=13;MQRankSum=-4.015;QD=8.56;ReadPosRankSum=0.387;VQSLOD=0.4323;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:34.84:0,35,566	0/0:4,0:4:11.86:0,12,99	0/0:14,0:7:17.72:0,18,193	0/0:14,0:5:8.90:0,9,92	0/0:1,0:1:3.01:0,3,59	0/0:9,0:7:21.07:0,21,350	0/0:21,0:21:59.21:0,59,768	1/1:12,0:12:16.75:129,17,0	0/0:14,0:14:42.11:0,42,614	0/0:2,0:2:6.02:0,6,75	0/0:3,0:3:9.03:0,9,139	0/0:8,0:8:24.07:0,24,339	0/0:8,0:8:20.94:0,21,403	0/0:16,0:16:48.16:0,48,792	0/0:13,0:11:33.10:0,33,498	0/0:7,0:7:21.07:0,21,272	0/0:15,0:15:29.78:0,30,418	0/0:12,0:12:6.49:0,6,288	1/1:10,1:10:2.31:73,2,0	1/1:2,1:3:0.48:19,0,0	1/1:24,0:19:35.12:273,35,0	0/0:3,0:3:9.03:0,9,158	0/0:3,0:3:9.03:0,9,132	0/0:12,0:12:33.11:0,33,493	0/0:4,0:4:12.04:0,12,207	./.	1/1:9,3:11:23.83:189,24,0	0/0:7,0:7:21.07:0,21,372
chr10	108303221	.	ACCACCACCAC	A	638.91	PASS	AB=0.940;AC=8;AF=0.148;AN=54;BaseQRankSum=6.559;DP=283;FS=1.898;HRun=0;HaplotypeScore=113.9582;InbreedingCoeff=-0.0208;MQ=48.06;MQ0=12;MQRankSum=-5.145;QD=7.89;ReadPosRankSum=2.757;VQSLOD=2.2543;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,3:24:99:226,0,267	1/1:2,0:2:4.30:16,4,0	0/0:10,0:3:3.01:0,3,41	0/0:9,0:2:6.02:0,6,75	0/0:2,0:2:3.01:0,3,132	0/0:10,0:8:20.96:0,21,663	0/0:18,0:18:47.30:0,47,1519	0/0:21,0:21:48.58:0,49,641	0/0:13,0:13:39.13:0,39,1035	0/0:2,0:2:6.02:0,6,139	0/0:3,0:3:9.02:0,9,223	0/0:14,0:14:42.14:0,42,847	0/0:11,0:11:30.57:0,31,1092	0/0:16,0:16:45.15:0,45,1551	0/0:11,0:9:24.08:0,24,842	0/0:4,0:4:9.03:0,9,216	0/1:15,2:17:99:131,0,144	0/1:10,2:12:99:116,0,179	0/1:11,0:11:46.92:47,0,121	0/1:4,0:4:56.33:56,0,69	0/0:27,0:23:14.69:0,15,412	0/0:4,0:4:12.04:0,12,386	0/0:3,0:3:9.03:0,9,198	0/0:13,0:13:39.13:0,39,1069	0/0:4,0:4:12.04:0,12,460	./.	0/1:11,0:10:99:176,0,178	0/0:7,0:7:18.06:0,18,883
chr10	108303888	.	AACAC	A	650.33	PASS	AB=0.938;AC=12;AF=0.231;AN=52;BaseQRankSum=3.102;DP=584;FS=1.965;HRun=0;HaplotypeScore=104.9393;InbreedingCoeff=0.4082;MQ=54.03;MQ0=28;MQRankSum=-0.520;QD=3.05;ReadPosRankSum=-0.421;VQSLOD=2.1520;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,6:35:14.16:193,14,0	1/1:6,0:5:3.01:46,3,0	./.	0/0:36,0:23:0.47:0,0,1	0/0:5,0:5:2.74:0,3,12	0/0:22,0:21:26.83:0,27,542	0/1:29,3:32:10.22:10,0,672	0/0:20,0:19:14.98:0,15,167	0/1:13,1:14:28.32:28,0,268	0/0:15,0:16:14.79:0,15,232	0/0:8,0:8:6.02:0,6,113	0/0:17,0:18:26.81:0,27,447	0/0:15,0:14:24.04:0,24,408	0/0:20,0:19:27.09:0,27,597	0/0:18,0:18:21.05:0,21,379	0/0:22,0:24:4.43:0,4,516	1/1:28,6:33:13.86:313,14,0	1/1:11,4:14:12.04:186,12,0	0/0:15,0:13:5.98:0,6,90	0/0:7,0:10:3.01:0,3,44	0/0:47,0:44:48.62:0,49,883	0/0:17,0:17:20.81:0,21,382	0/0:7,0:8:12.02:0,12,233	0/1:42,1:42:3.42:3,0,781	0/0:13,0:15:23.82:0,24,410	0/1:29,1:28:21.37:21,0,435	0/0:9,0:11:8.62:0,9,153	./.
chr10	108303967	.	G	GGA	3001.52	PASS	AB=0.776;AC=10;AF=0.179;AN=56;BaseQRankSum=-9.508;DP=595;FS=12.981;HRun=0;HaplotypeScore=79.8421;InbreedingCoeff=0.8025;MQ=62.64;MQ0=9;MQRankSum=1.619;QD=19.88;ReadPosRankSum=-2.772;VQSLOD=2.5439;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:72.18:0,72,841	0/0:6,0:6:14.92:0,15,183	0/0:17,0:8:9.01:0,9,107	0/0:29,0:22:29.19:0,29,390	0/0:15,0:15:30.09:0,30,366	0/0:22,0:22:54.17:0,54,660	0/0:31,0:31:66.19:0,66,794	1/1:12,27:39:47.55:1172,48,0	0/0:23,0:23:45.13:0,45,538	0/0:18,0:17:36.11:0,36,434	0/0:8,0:8:18.06:0,18,219	0/0:27,0:26:63.16:0,63,734	0/1:21,0:21:4.13:4,0,434	0/0:18,0:18:36.09:0,36,418	0/0:22,0:24:59.84:0,60,697	0/0:39,0:39:84.24:0,84,998	0/0:33,0:33:74.55:0,75,874	0/0:11,0:11:24.08:0,24,293	1/1:12,6:14:18.06:292,18,0	1/1:1,3:4:8.99:117,9,0	0/1:10,40:54:1.07:993,0,1	0/0:11,0:12:23.91:0,24,270	0/0:10,0:10:15.03:0,15,183	0/0:33,0:32:75.82:0,76,979	0/0:6,0:7:14.88:0,15,160	0/0:23,0:23:54.17:0,54,657	1/1:0,14:14:36.12:584,36,0	0/0:6,0:6:17.96:0,18,188
chr10	108305015	.	GGT	G	202.13	PASS	AB=0.922;AC=7;AF=0.125;AN=56;BaseQRankSum=9.232;DP=439;FS=40.335;HRun=0;HaplotypeScore=72.3976;InbreedingCoeff=0.1038;MQ=76.01;MQ0=1;MQRankSum=0.356;QD=2.11;ReadPosRankSum=5.189;VQSLOD=-0.4436;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:3.76:0,4,156	0/1:7,1:8:12.88:13,0,53	0/0:16,0:16:43.44:0,43,446	0/0:19,0:17:7.73:0,8,328	0/0:4,0:4:11.98:0,12,149	0/0:16,0:16:32.98:0,33,374	0/0:29,0:29:80.43:0,80,1078	0/1:20,0:20:57.04:57,0,161	0/0:18,0:18:50.93:0,51,624	0/0:13,0:13:25.95:0,26,312	0/0:3,0:3:9.01:0,9,115	0/0:30,0:30:81.12:0,81,1115	0/0:19,0:19:52.83:0,53,597	0/0:15,0:15:23.99:0,24,279	0/0:14,0:14:32.97:0,33,495	0/0:25,0:25:68.94:0,69,883	0/0:20,0:20:28.83:0,29,292	0/0:14,0:14:38.67:0,39,462	0/1:16,0:16:11.58:12,0,164	0/1:4,2:6:31.24:63,0,31	0/1:31,1:30:61.57:62,0,174	0/0:4,0:4:10.73:0,11,100	0/0:6,0:6:8:0,8,66	0/0:24,0:24:71.82:0,72,852	0/0:8,0:8:17.96:0,18,215	0/0:15,0:15:29.92:0,30,340	1/1:13,1:14:7.96:124,8,0	0/0:8,0:8:14.37:0,14,264
chr10	108305280	.	C	CCATGGA	13912.81	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-6.397;DP=652;FS=6.784;HRun=0;HaplotypeScore=133.6482;InbreedingCoeff=0.9834;MQ=75.21;MQ0=0;MQRankSum=-15.168;QD=61.83;ReadPosRankSum=-4.694;VQSLOD=3.6212;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,23:31:48.10:1560,48,0	1/1:0,7:7:18.01:551,18,0	0/0:22,0:22:57.16:0,57,1171	0/0:17,0:17:42.93:0,43,739	0/0:12,0:12:36.08:0,36,795	0/0:22,0:22:57.18:0,57,1262	0/0:32,0:32:96.21:0,96,1895	1/1:7,21:32:90.18:2365,90,0	0/0:27,0:27:75.18:0,75,1623	0/0:30,0:30:72.19:0,72,1488	0/0:6,0:6:18.06:0,18,400	0/0:37,0:37:99:0,111,2597	0/0:29,0:29:75.24:0,75,1719	0/0:36,0:36:99:0,108,2459	0/0:28,0:28:81.22:0,81,1683	0/0:27,0:27:75.17:0,75,1625	1/1:6,18:26:50.20:1701,50,0	1/1:3,20:25:45.15:1600,45,0	1/1:7,9:18:45.13:1224,45,0	1/1:1,10:11:27.01:785,27,0	1/1:8,33:49:48.08:1571,48,0	0/0:4,0:4:9.03:0,9,213	0/0:6,0:6:12.03:0,12,203	0/0:40,0:40:99:0,105,2297	0/0:16,0:16:48.14:0,48,1041	0/0:19,0:19:48.15:0,48,1056	1/1:0,26:26:71.87:2555,72,0	0/0:17,0:17:51.18:0,51,1205
chr10	108306038	.	A	ATT	3701.64	PASS	AB=0.900;AC=19;AF=0.339;AN=56;BaseQRankSum=2.834;DP=509;FS=3.084;HRun=9;HaplotypeScore=67.4094;InbreedingCoeff=0.8962;MQ=70.09;MQ0=3;MQRankSum=-0.616;QD=22.71;ReadPosRankSum=-1.733;VQSLOD=2.6508;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:40:87.29:1320,87,0	1/1:2,0:3:6.01:56,6,0	0/0:13,0:10:11.47:0,11,112	0/1:8,0:9:19.30:19,0,54	0/0:28,0:28:46.91:0,47,700	0/0:17,0:17:42.07:0,42,447	0/0:16,0:16:39.05:0,39,406	1/1:6,1:16:25.86:247,26,0	0/0:22,0:22:32.76:0,33,550	0/0:28,0:28:75.16:0,75,788	0/0:13,0:13:33.05:0,33,343	0/0:20,0:20:45.08:0,45,471	0/0:16,0:16:42.10:0,42,447	0/0:27,0:27:66.14:0,66,695	0/0:19,0:19:48.11:0,48,511	0/0:13,0:13:36.09:0,36,383	1/1:3,13:15:34.82:478,35,0	1/1:2,9:11:24.08:370,24,0	1/1:5,0:17:39.02:368,39,0	1/1:4,0:18:42:403,42,0	1/1:7,1:19:30.05:298,30,0	0/0:14,0:14:38.83:0,39,395	0/0:14,0:14:33.03:0,33,351	0/0:23,0:23:66.16:0,66,702	0/0:16,0:16:36.03:0,36,374	0/0:23,0:23:48.06:0,48,511	1/1:3,0:10:15.02:144,15,0	0/0:24,0:24:63.13:0,63,671
chr10	108306752	.	TG	T	4037.41	PASS	AB=0.970;AC=22;AF=0.393;AN=56;BaseQRankSum=-2.037;DP=590;FS=3.799;HRun=1;HaplotypeScore=67.9112;InbreedingCoeff=0.6267;MQ=68.92;MQ0=7;MQRankSum=-2.744;QD=13.87;ReadPosRankSum=-5.631;VQSLOD=0.7287;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,1:34:94.06:698,94,0	1/1:10,0:10:26.97:231,27,0	0/1:32,2:14:36.04:44,0,36	0/1:27,2:16:8.70:33,0,9	0/1:22,0:22:12.03:12,0,232	0/0:25,0:25:62.01:0,62,570	0/0:19,0:19:9.35:0,9,309	1/1:23,1:24:68.27:561,68,0	0/0:17,0:17:11.35:0,11,213	0/0:26,0:26:67.14:0,67,540	0/0:22,0:22:10.38:0,10,338	0/0:15,0:15:23.97:0,24,275	0/1:22,0:22:6.85:7,0,127	0/0:11,0:11:0.24:0,0,65	0/0:19,0:19:1.63:0,2,270	0/0:20,0:20:9.14:0,9,350	1/1:32,0:32:88.84:688,89,0	1/1:18,0:18:46.98:363,47,0	1/1:21,1:20:58.92:496,59,0	1/1:14,2:16:41.88:348,42,0	1/1:14,0:13:29.81:235,30,0	0/0:23,0:23:9.64:0,10,355	0/0:19,0:19:32.82:0,33,454	0/0:28,0:28:17.50:0,17,441	0/0:21,0:21:32.77:0,33,407	0/0:26,0:26:13.43:0,13,371	1/1:14,0:14:38.92:321,39,0	0/0:8,0:8:23.96:0,24,217
chr10	108308610	.	CGGCTTCT	C	3938.10	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.052;DP=582;FS=5.854;HRun=0;HaplotypeScore=134.8775;InbreedingCoeff=0.9841;MQ=80.29;MQ0=0;MQRankSum=-8.887;QD=45.79;ReadPosRankSum=-1.918;VQSLOD=3.0534;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,4573	1/1:1,3:4:9.03:242,9,0	0/0:17,0:17:44.33:0,44,1749	0/0:17,0:17:45.15:0,45,1433	0/0:24,0:24:66.20:0,66,2410	0/0:23,0:23:69.23:0,69,2657	0/0:20,0:20:60.19:0,60,2294	1/1:1,18:19:51.17:1304,51,0	0/0:18,0:18:54.14:0,54,1792	0/0:17,0:17:48.16:0,48,1828	0/0:12,0:12:36.12:0,36,1444	0/0:31,0:31:93.31:0,93,3583	0/0:26,0:26:72.25:0,72,2869	0/0:20,0:20:57.17:0,57,2109	0/0:23,0:23:69.24:0,69,2799	0/0:24,0:24:69.24:0,69,2684	0/0:32,0:32:96.23:0,96,3571	0/0:31,0:31:90.30:0,90,3551	1/1:0,16:16:45.14:953,45,0	1/1:1,13:15:33.10:708,33,0	1/1:0,24:24:21.05:328,21,0	0/0:20,0:20:57.19:0,57,1916	0/0:11,0:11:27.08:0,27,928	0/0:22,0:22:66.23:0,66,2491	0/0:18,0:18:54.19:0,54,2185	0/0:32,0:32:96.31:0,96,3249	1/1:0,8:8:15.52:404,16,0	0/0:18,0:18:54.19:0,54,2123
chr10	108308821	.	ACGAATCGCCGGC	A	920.64	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=4.580;DP=246;FS=0.000;HRun=0;HaplotypeScore=87.9342;InbreedingCoeff=0.7403;MQ=74.36;MQ0=0;MQRankSum=-4.438;QD=61.38;ReadPosRankSum=0.723;VQSLOD=3.3558;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.22:0,66,3331	1/1:0,1:1:3.01:119,3,0	0/0:7,0:7:20.24:0,20,594	0/0:9,0:9:21.50:0,21,733	0/0:2,0:2:6.02:0,6,162	0/0:5,0:5:15.05:0,15,500	0/0:19,0:19:51.16:0,51,2025	1/1:0,1:1:3.01:119,3,0	0/0:6,0:6:18.06:0,18,910	0/0:11,0:11:33.11:0,33,2036	0/0:6,0:6:15.05:0,15,682	0/0:15,0:15:42.14:0,42,2016	0/0:11,0:11:33.11:0,33,1545	0/0:7,0:7:18.06:0,18,821	0/0:11,0:11:27.08:0,27,1043	0/0:12,0:12:33.11:0,33,1642	0/0:14,0:14:39.11:0,39,1480	0/0:11,0:10:30.10:0,30,1686	1/1:1,5:6:18.06:635,18,0	1/1:0,5:5:3.01:119,3,0	./.	0/0:6,0:6:18.06:0,18,538	0/0:8,0:8:24.08:0,24,720	0/0:13,0:13:9.03:0,9,437	0/0:7,0:7:21.07:0,21,895	0/0:20,0:20:60.21:0,60,3283	1/1:0,2:2:3.01:68,3,0	0/0:2,0:2:6.02:0,6,380
chr10	108309199	.	CGTTCGT	C	4516.49	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.384;DP=505;FS=0.500;HRun=0;HaplotypeScore=105.4584;InbreedingCoeff=0.9466;MQ=81.51;MQ0=0;MQRankSum=-11.962;QD=59.43;ReadPosRankSum=0.936;VQSLOD=5.2011;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:78.27:1974,78,0	0/0:2,0:2:6.02:0,6,200	0/0:21,0:21:62.94:0,63,1797	0/0:11,0:13:29.50:0,30,1028	0/0:8,0:8:24.08:0,24,902	0/0:14,0:14:42.14:0,42,1515	0/0:23,0:23:69.22:0,69,2446	0/0:28,0:28:81.28:0,81,2789	0/0:20,0:20:60.16:0,60,2109	0/0:17,0:17:51.12:0,51,1750	0/0:5,0:5:15.05:0,15,564	0/0:27,0:27:81.28:0,81,2867	0/0:19,0:19:54.19:0,54,1964	0/0:18,0:18:54.19:0,54,2018	0/0:16,0:16:48.16:0,48,1805	0/0:22,0:22:66.23:0,66,2483	1/1:0,21:21:45.15:1105,45,0	1/1:0,26:26:57.20:1438,57,0	0/0:16,0:16:48.16:0,48,1639	0/0:5,0:5:15.05:0,15,564	0/0:30,0:30:87.28:0,87,3025	0/0:13,0:13:39.13:0,39,1416	0/0:12,0:12:36.12:0,36,1352	0/0:40,0:40:99:0,120,4152	0/0:9,0:9:27.09:0,27,999	0/0:22,0:22:66.23:0,66,2407	0/0:24,0:24:69.24:0,69,2591	0/0:5,0:5:15.05:0,15,564
chr10	108309478	.	G	GT	3998.85	PASS	AB=0.789;AC=18;AF=0.321;AN=56;BaseQRankSum=1.254;DP=664;FS=1.526;HRun=12;HaplotypeScore=89.2066;InbreedingCoeff=0.4602;MQ=63.50;MQ0=2;MQRankSum=-4.189;QD=12.54;ReadPosRankSum=-1.226;VQSLOD=3.4008;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,21:51:99:959,104,0	1/1:3,6:9:18.03:175,18,0	0/0:19,0:10:3.80:0,4,28	0/1:27,0:15:0.93:1,0,39	0/0:26,1:28:13.90:0,14,316	0/0:19,0:20:18.56:0,19,208	0/0:19,0:21:34.61:0,35,229	1/1:14,12:27:9.98:357,10,0	0/0:17,1:18:5.78:0,6,271	0/0:34,0:34:52.62:0,53,501	0/1:16,3:19:36.02:36,0,199	0/0:19,0:19:46.62:0,47,315	0/0:20,1:21:12.24:0,12,238	0/0:12,0:13:24.44:0,24,150	0/0:11,0:12:15.46:0,15,95	0/0:22,0:24:61.38:0,61,443	0/1:16,17:33:6.16:509,0,6	1/1:5,26:32:4.92:390,5,0	0/1:17,14:32:11.65:450,0,12	0/1:13,17:32:25.30:517,0,25	1/1:6,6:11:5.08:202,5,0	0/0:27,0:29:55.92:0,56,450	0/1:17,2:19:22.09:22,0,186	0/0:26,0:27:59.39:0,59,391	0/0:17,0:20:48.39:0,48,328	0/0:27,1:29:14.77:0,15,412	1/1:20,5:25:17.29:381,17,0	0/0:11,0:11:23.63:0,24,170
chr10	108309509	.	T	TG	3627.02	PASS	AB=0.533;AC=11;AF=0.196;AN=56;BaseQRankSum=-2.168;DP=667;FS=6.879;HRun=0;HaplotypeScore=89.9964;InbreedingCoeff=0.8594;MQ=63.69;MQ0=8;MQRankSum=-1.174;QD=28.79;ReadPosRankSum=0.354;VQSLOD=3.3298;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:99:0,138,1783	0/1:1,7:8:20.94:170,0,21	0/0:30,0:13:17.85:0,18,216	0/0:23,0:8:4.87:0,5,84	0/0:21,0:21:60.09:0,60,743	0/0:14,0:14:39.10:0,39,516	0/0:19,0:19:44:0,44,609	1/1:5,22:27:58.41:854,58,0	0/0:19,0:18:51.09:0,51,629	0/0:33,0:33:97.13:0,97,1234	0/0:20,0:20:53.42:0,53,697	0/0:23,0:23:66.63:0,67,828	0/0:26,0:26:70.17:0,70,866	0/0:19,0:19:51.09:0,51,611	0/0:13,0:13:33.08:0,33,399	0/0:21,0:21:56.83:0,57,710	0/0:32,0:32:96.02:0,96,1099	0/0:29,0:29:65.88:0,66,780	1/1:7,14:21:34.79:553,35,0	1/1:5,32:37:99:1224,100,0	1/1:0,9:9:20.98:250,21,0	0/0:26,0:26:70.89:0,71,940	0/0:22,0:22:58.49:0,58,755	0/0:37,0:37:99:0,102,1268	0/0:24,0:24:72.05:0,72,900	0/0:32,0:32:90.16:0,90,1100	1/1:5,18:23:43.80:576,44,0	0/0:10,0:10:27.07:0,27,341
chr10	108311798	.	C	CT	1824.06	PASS	AB=0.968;AC=11;AF=0.196;AN=56;BaseQRankSum=-6.676;DP=631;FS=9.107;HRun=10;HaplotypeScore=115.1512;InbreedingCoeff=0.3797;MQ=60.26;MQ0=16;MQRankSum=0.185;QD=9.97;ReadPosRankSum=1.775;VQSLOD=1.9631;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,29:40:89.35:978,89,0	0/1:8,0:8:24.20:34,0,24	0/0:50,0:11:15.42:0,15,82	0/0:43,0:13:18.37:0,18,128	0/0:30,0:31:52.58:0,53,505	0/0:16,0:16:41.26:0,41,313	0/0:17,0:17:41.83:0,42,328	0/1:16,0:16:11.79:61,0,12	0/0:21,0:21:58.50:0,59,438	0/0:21,0:21:47.92:0,48,393	0/0:26,0:26:62.99:0,63,495	0/0:19,0:20:49.70:0,50,383	0/0:21,0:21:38.86:0,39,332	0/0:18,0:18:46.93:0,47,367	0/0:22,0:23:49.87:0,50,390	0/0:17,0:17:32.93:0,33,268	1/1:6,26:32:7.03:516,7,0	1/1:3,13:16:4.92:241,5,0	0/1:19,1:20:48.45:48,0,49	0/1:25,2:27:51.58:94,0,52	0/0:5,0:5:6.08:0,6,17	0/0:13,0:13:28.87:0,29,212	0/0:12,0:13:25.02:0,25,184	0/0:35,0:35:85.52:0,86,676	0/0:28,0:28:65.81:0,66,526	0/0:17,0:17:35.89:0,36,289	0/1:22,1:22:5.55:6,0,73	0/0:8,0:9:20.01:0,20,154
chr10	108314808	.	CATATT	C	197.25	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.741;DP=520;FS=0.000;HRun=0;HaplotypeScore=98.4611;InbreedingCoeff=0.9232;MQ=77.53;MQ0=11;MQRankSum=-4.477;QD=10.96;ReadPosRankSum=-2.170;VQSLOD=1.5621;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,7:9:11.74:72,12,0	0/0:8,0:7:21.04:0,21,507	0/0:34,0:23:66.23:0,66,1819	0/0:41,0:25:59.45:0,59,1412	0/0:20,0:20:60.18:0,60,1652	0/0:18,0:18:51.18:0,51,1582	0/0:23,0:23:69.24:0,69,2086	0/0:34,0:32:91.49:0,91,2415	0/0:18,0:17:36.12:0,36,1006	0/0:21,0:20:60.21:0,60,1831	0/0:16,0:16:45.09:0,45,1193	0/0:22,0:22:57.20:0,57,1784	0/0:14,0:14:42.14:0,42,1304	0/0:15,0:15:45.15:0,45,1408	0/0:29,0:29:84.23:0,84,2488	0/0:20,0:20:56.93:0,57,1603	1/1:3,0:2:6.02:113,6,0	1/1:2,1:3:9.02:136,9,0	0/0:21,0:21:52.59:0,53,1439	0/0:12,0:12:27.07:0,27,761	0/0:12,0:12:23.85:0,24,662	0/0:17,0:17:45.14:0,45,1418	0/0:17,0:17:45.11:0,45,1293	0/0:25,0:24:63.22:0,63,1858	0/0:19,0:19:48.05:0,48,1647	0/0:20,0:20:60.20:0,60,1820	0/0:12,0:11:36.12:0,36,1068	0/0:13,0:11:30.10:0,30,807
chr10	108314868	.	TTCTTCC	T	526.67	PASS	AB=0.953;AC=7;AF=0.125;AN=56;BaseQRankSum=7.060;DP=451;FS=8.572;HRun=0;HaplotypeScore=99.2598;InbreedingCoeff=0.0569;MQ=51.50;MQ0=6;MQRankSum=-8.005;QD=4.32;ReadPosRankSum=-3.381;VQSLOD=0.2997;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:76.74:181,0,77	0/0:9,0:7:6.92:0,7,317	0/0:7,0:1:2.98:0,3,22	0/0:10,0:3:6.01:0,6,61	0/0:23,0:23:53.23:0,53,1306	0/0:13,0:13:28.12:0,28,631	0/0:18,0:18:22.07:0,22,870	0/1:29,13:39:99:282,0,375	0/0:13,0:12:29.82:0,30,382	0/0:20,0:19:57.12:0,57,1258	0/0:10,0:10:27.05:0,27,498	0/0:19,0:18:48.02:0,48,1059	0/0:20,0:20:51.13:0,51,1272	0/0:13,0:13:36.08:0,36,894	0/0:23,0:23:56.91:0,57,1278	0/0:15,0:15:42.01:0,42,793	1/1:11,0:10:5.68:32,6,0	0/0:10,0:10:5.95:0,6,53	0/1:16,0:16:71.85:72,0,228	0/1:19,0:16:55.75:56,0,383	0/0:5,0:5:2.14:0,2,114	0/0:12,0:12:36.08:0,36,797	0/0:19,0:18:42.08:0,42,873	0/0:18,0:17:32.83:0,33,978	0/0:22,0:22:60.14:0,60,1247	0/0:25,0:25:75.13:0,75,1521	0/1:19,0:18:31.93:32,0,257	0/0:5,0:4:12.04:0,12,342
chr10	108314871	.	TTCC	T	629.27	PASS	AB=0.911;AC=9;AF=0.161;AN=56;BaseQRankSum=7.588;DP=459;FS=8.205;HRun=0;HaplotypeScore=74.1800;InbreedingCoeff=0.0192;MQ=51.58;MQ0=6;MQRankSum=-8.003;QD=4.40;ReadPosRankSum=-1.787;VQSLOD=0.7786;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,1:16:23.97:175,0,24	0/1:9,1:8:25.68:26,0,224	0/0:9,0:2:5.96:0,6,43	0/0:12,0:3:6.01:0,6,61	0/0:22,0:22:56.08:0,56,929	0/0:12,0:12:28.86:0,29,459	0/0:19,0:19:28.06:0,28,704	0/1:42,0:39:99:122,0,444	0/0:13,0:12:29.95:0,30,282	0/0:20,0:19:57.07:0,57,917	0/0:11,0:11:20.08:0,20,370	0/0:21,0:20:53.79:0,54,814	0/0:17,0:17:51.12:0,51,857	0/0:12,0:12:36.06:0,36,596	0/0:23,0:23:56.90:0,57,924	0/0:16,0:16:47.88:0,48,591	1/1:10,1:10:8.75:84,9,0	0/1:9,1:10:14.62:15,0,15	0/1:16,1:17:42.86:43,0,248	0/1:18,1:17:33.80:34,0,315	0/0:5,0:5:2.75:0,3,82	0/0:13,0:13:39.06:0,39,571	0/0:18,0:17:42.02:0,42,651	0/0:18,0:17:22.40:0,22,623	0/0:23,0:23:50.23:0,50,967	0/0:26,0:26:77.90:0,78,1120	0/1:11,7:17:99:273,0,187	0/0:6,0:5:15.01:0,15,236
chr10	108314877	.	T	TTCC	747.92	PASS	AB=0.861;AC=7;AF=0.125;AN=56;BaseQRankSum=4.496;DP=457;FS=1.700;HRun=0;HaplotypeScore=75.2900;InbreedingCoeff=0.4814;MQ=51.57;MQ0=6;MQRankSum=-5.117;QD=7.41;ReadPosRankSum=-1.503;VQSLOD=2.3392;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,4:17:24.85:732,25,0	0/0:10,0:8:23.29:0,23,352	0/0:14,0:4:6.02:0,6,94	0/1:16,0:7:3.34:3,0,106	0/0:20,0:20:60.09:0,60,949	0/0:10,0:10:30.10:0,30,511	0/0:18,0:18:48.15:0,48,771	0/1:42,0:39:15.35:15,0,882	0/0:12,0:11:30.09:0,30,486	0/0:20,0:20:60.20:0,60,967	0/0:11,0:11:30.08:0,30,482	0/0:21,0:20:51.13:0,51,744	0/0:18,0:18:54.18:0,54,886	0/0:12,0:12:36.11:0,36,588	0/0:18,0:18:51.16:0,51,837	0/0:16,0:16:48.07:0,48,725	0/1:4,10:13:2.16:47,0,2	1/1:1,10:11:5.91:78,6,0	0/0:14,0:14:3:0,3,218	0/0:18,0:16:5.03:0,5,453	0/0:3,0:3:6.02:0,6,99	0/0:13,0:13:39.11:0,39,608	0/0:16,0:15:38.75:0,39,636	0/0:17,0:16:42.13:0,42,686	0/0:24,0:24:69.22:0,69,1114	0/0:27,0:27:75.18:0,75,1117	0/0:18,0:17:42.26:0,42,531	0/0:6,0:5:15.02:0,15,222
chr10	108315414	.	A	AGG	48.44	PASS	AB=0.961;AC=21;AF=0.375;AN=56;BaseQRankSum=-0.291;DP=403;FS=5.113;HRun=14;HaplotypeScore=120.1658;InbreedingCoeff=0.3772;MQ=96.96;MQ0=4;MQRankSum=-1.650;QD=0.28;ReadPosRankSum=0.000;VQSLOD=0.2781;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:1.40:0,1,87	0/1:3,0:3:0.52:3,0,1	0/0:47,0:34:6.74:0,7,134	0/0:39,0:29:14.31:0,14,157	0/1:15,0:16:0:0,0,0	0/1:14,0:16:0:0,0,0	0/0:22,0:23:8.11:0,8,50	1/1:10,0:10:2.58:25,3,0	0/0:14,2:16:2.55:0,3,25	0/0:11,0:11:2.67:0,3,12	0/1:7,0:7:0:0,0,0	0/1:11,0:11:0:0,0,0	0/1:11,1:12:0:0,0,0	0/1:12,0:12:0:0,0,0	0/1:18,0:18:0:1,0,0	1/1:15,0:15:2.13:6,2,0	0/0:10,0:15:14.66:0,15,120	0/0:4,0:5:8.57:0,9,62	0/1:7,1:7:1.59:4,0,2	0/1:6,1:7:0:0,0,0	1/1:8,0:8:3.01:36,3,0	0/0:10,0:11:2.64:0,3,12	0/0:11,0:11:0.38:0,0,0	0/0:19,0:19:2.18:0,2,24	0/1:14,0:14:0:0,0,0	0/0:10,0:10:2.90:0,3,23	1/1:7,0:7:6.01:63,6,0	1/1:8,0:8:2.98:21,3,0
chr10	108316675	.	G	GTT	2416.56	PASS	AB=0.825;AC=16;AF=0.286;AN=56;BaseQRankSum=12.546;DP=570;FS=3.904;HRun=8;HaplotypeScore=104.1659;InbreedingCoeff=0.8866;MQ=79.29;MQ0=3;MQRankSum=-6.783;QD=14.83;ReadPosRankSum=-5.428;VQSLOD=0.4530;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:29:53.99:371,54,0	0/1:6,0:13:1.71:49,0,2	0/0:33,0:31:47.40:0,47,416	0/0:33,0:26:34.30:0,34,342	0/0:35,0:35:96.24:0,96,1060	0/0:21,0:21:60.16:0,60,669	0/0:12,0:12:30.07:0,30,334	1/1:14,7:23:51.49:549,51,0	0/0:10,0:10:27.07:0,27,301	0/0:31,0:31:81.21:0,81,902	0/0:17,0:17:45.12:0,45,502	0/0:15,0:15:36.06:0,36,392	0/0:22,0:22:59.83:0,60,657	0/0:21,0:21:48.12:0,48,535	0/0:17,0:17:51.14:0,51,568	0/0:16,0:16:42.09:0,42,468	1/1:12,0:12:17.61:111,18,0	0/1:12,0:10:0.11:7,0,0	1/1:15,7:23:38.83:476,39,0	1/1:5,14:23:51.04:585,51,0	1/1:4,6:10:5.05:91,5,0	0/0:27,0:27:75.18:0,75,826	0/0:19,0:19:57.13:0,57,624	0/0:16,0:16:42.09:0,42,457	0/0:16,0:16:45.08:0,45,481	0/0:31,0:31:39.11:0,39,796	1/1:12,2:14:33.47:373,33,0	0/0:14,0:14:39.07:0,39,413
chr10	108316683	.	TG	T	1752.27	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.519;DP=569;FS=1.804;HRun=1;HaplotypeScore=86.4291;InbreedingCoeff=0.9710;MQ=70.37;MQ0=3;MQRankSum=-4.443;QD=11.53;ReadPosRankSum=-5.532;VQSLOD=-0.2156;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:27:46.41:299,46,0	1/1:10,0:10:17.13:130,17,0	0/0:30,0:26:42.83:0,43,474	0/0:31,1:24:12.62:0,13,435	0/0:33,0:33:99:0,99,1279	0/0:20,0:20:60.20:0,60,796	0/0:12,0:12:36.10:0,36,462	1/1:24,0:24:60.88:392,61,0	0/0:9,0:9:27.08:0,27,349	0/0:30,0:30:90.27:0,90,1146	0/0:20,0:20:57.12:0,57,693	0/0:15,0:15:45.10:0,45,546	0/0:24,0:24:69.18:0,69,864	0/0:22,0:22:66.08:0,66,776	0/0:20,0:20:60.15:0,60,749	0/0:16,0:16:48.14:0,48,619	1/1:12,0:12:15.95:110,16,0	1/1:10,0:8:5.46:38,5,0	1/1:18,2:18:46.54:329,47,0	1/1:24,0:24:53.37:327,53,0	1/1:9,0:9:14.85:106,15,0	0/0:28,0:28:84.20:0,84,1036	0/0:23,0:23:66.17:0,66,829	0/0:19,0:19:51.11:0,51,627	0/0:18,0:18:54.10:0,54,636	0/0:32,0:32:93.20:0,93,1141	1/1:14,1:14:34.27:232,34,0	0/0:14,0:14:42.08:0,42,507
chr10	108316879	.	A	ATGTGTG	1780.74	PASS	AB=0.837;AC=14;AF=0.250;AN=56;BaseQRankSum=-0.476;DP=711;FS=3.842;HRun=0;HaplotypeScore=157.6332;InbreedingCoeff=0.7408;MQ=64.93;MQ0=9;MQRankSum=-4.553;QD=8.77;ReadPosRankSum=-5.481;VQSLOD=0.7857;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:29:2.06:6,0,2	1/1:1,3:6:9.03:234,9,0	0/0:35,0:18:6.64:0,7,55	0/1:29,0:21:18.94:19,0,28	0/0:15,0:15:15.05:0,15,290	0/0:16,0:16:27.09:0,27,547	0/0:34,0:35:52.87:0,53,1168	1/1:15,11:30:49.54:787,50,0	0/0:21,0:22:51.16:0,51,980	0/0:32,0:33:33.08:0,33,583	0/0:19,0:19:24.08:0,24,471	0/0:24,0:26:51.11:0,51,880	0/0:15,0:15:39:0,39,725	0/0:29,0:29:51.10:0,51,1086	0/0:39,0:41:75.25:0,75,1499	0/0:31,0:34:78.25:0,78,1460	0/0:10,0:25:5.82:0,6,50	1/1:12,0:19:12.94:140,13,0	1/1:14,5:19:23.77:364,24,0	0/0:3,7:12:0.88:0,1,2	1/1:22,20:47:3.01:39,3,0	0/0:22,0:22:40.67:0,41,726	0/0:13,0:16:27.08:0,27,469	0/0:33,0:36:54.16:0,54,1063	0/0:20,0:19:32.61:0,33,596	0/0:39,0:39:49.56:0,50,851	1/1:4,13:22:12.04:367,12,0	0/0:15,0:17:36.09:0,36,608
chr10	108317103	.	GTGTT	G	2181.96	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.826;DP=799;FS=18.276;HRun=0;HaplotypeScore=170.0549;InbreedingCoeff=0.9996;MQ=61.90;MQ0=7;MQRankSum=-7.900;QD=31.62;ReadPosRankSum=-0.658;VQSLOD=2.4150;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,18:27:53.69:989,54,0	0/0:13,0:13:33.11:0,33,848	0/0:34,0:19:44.79:0,45,919	0/0:29,0:14:32.47:0,32,719	0/0:13,0:13:36.12:0,36,878	0/0:21,0:21:57.20:0,57,1510	0/0:24,0:24:66.23:0,66,1763	0/0:41,0:41:99:0,114,3026	0/0:20,0:20:57.20:0,57,1539	0/0:49,0:49:99:0,132,3438	0/0:19,0:19:50.91:0,51,1255	0/0:35,0:35:96.32:0,96,2466	0/0:23,0:23:66.23:0,66,1748	0/0:33,0:32:87.30:0,87,2311	0/0:36,0:36:99:0,99,2548	0/0:44,0:44:99:0,126,3297	1/1:7,12:19:29.96:483,30,0	1/1:8,13:20:48.82:852,49,0	0/0:24,0:24:70.12:0,70,1774	0/0:27,0:27:75.08:0,75,1649	0/0:48,0:48:99:0,114,2470	0/0:30,0:30:81.28:0,81,2093	0/0:16,0:16:48.16:0,48,1205	0/0:34,0:34:99:0,99,2597	0/0:32,0:32:75.27:0,75,2218	0/0:33,0:33:91.53:0,92,2264	0/0:25,0:25:72.25:0,72,1882	0/0:26,0:26:78.27:0,78,1998
chr10	108317117	.	GGTGTGT	G	2928.32	PASS	AB=0.697;AC=11;AF=0.196;AN=56;BaseQRankSum=7.369;DP=849;FS=0.000;HRun=0;HaplotypeScore=198.6380;InbreedingCoeff=0.8387;MQ=56.07;MQ0=17;MQRankSum=-8.415;QD=16.54;ReadPosRankSum=-0.691;VQSLOD=2.7159;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:32:14.75:0,15,152	1/1:3,10:13:21.07:440,21,0	0/0:43,0:16:14.83:0,15,201	0/0:34,0:13:15.05:0,15,352	0/0:18,0:18:30.10:0,30,914	0/0:18,0:22:44.42:0,44,1285	0/0:27,1:31:6.34:0,6,1861	1/1:23,18:40:51.10:913,51,0	0/0:14,0:18:39.13:0,39,1003	0/0:42,0:44:96.31:0,96,2705	0/0:22,0:23:41.67:0,42,1275	0/0:34,0:36:84.29:0,84,2575	0/0:25,0:26:57.20:0,57,1809	0/0:26,0:33:81.28:0,81,2263	0/0:34,0:37:81.28:0,81,2519	0/0:39,0:42:84.27:0,84,2559	0/0:18,0:22:21.96:0,22,440	0/0:18,0:22:36.12:0,36,702	0/1:12,10:22:29.34:447,0,29	1/1:16,9:26:9.03:181,9,0	1/1:31,19:49:15.01:261,15,0	0/0:29,0:33:75.26:0,75,2119	0/0:19,0:20:39.13:0,39,1205	0/0:35,0:37:90.31:0,90,2703	0/0:30,0:30:75.14:0,75,2251	0/0:37,0:37:69.15:0,69,1807	1/1:10,13:24:42.14:860,42,0	0/0:21,0:24:62.70:0,63,1819
chr10	108318678	.	GA	G	3032.12	PASS	AB=0.936;AC=21;AF=0.375;AN=56;BaseQRankSum=9.078;DP=534;FS=0.413;HRun=11;HaplotypeScore=52.1899;InbreedingCoeff=0.7162;MQ=53.36;MQ0=36;MQRankSum=1.011;QD=12.23;ReadPosRankSum=0.365;VQSLOD=3.0065;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,19:25:49.95:417,50,0	1/1:0,5:5:14.98:123,15,0	0/1:12,0:3:17.24:17,0,22	0/0:13,0:5:5.96:0,6,18	0/0:28,0:28:59.98:0,60,619	0/0:18,0:16:41.94:0,42,430	0/0:16,0:16:8.26:0,8,302	1/1:14,26:33:28.11:535,28,0	0/1:8,1:9:3.60:4,0,165	0/0:20,0:16:11.56:0,12,327	0/0:30,1:30:63.15:0,63,662	0/0:12,1:12:2.41:0,2,223	0/0:4,0:4:8.98:0,9,84	0/0:13,0:13:35.71:0,36,346	0/0:19,0:18:45.11:0,45,478	0/0:14,0:12:30.08:0,30,320	1/1:10,31:39:80.90:665,81,0	1/1:8,13:17:12.31:247,12,0	1/1:6,15:19:14.99:318,15,0	1/1:5,23:27:59.91:492,60,0	1/1:3,5:7:11.98:99,12,0	0/1:9,1:8:6.73:7,0,142	0/0:15,1:14:8.44:0,8,293	0/0:17,0:16:33.08:0,33,352	0/0:22,1:20:20.40:0,20,408	0/0:22,1:22:18.43:0,18,412	1/1:7,20:25:12.89:313,13,0	0/0:13,0:10:27.07:0,27,287
chr10	108320088	.	T	TAA	12937.32	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-14.887;DP=802;FS=5.751;HRun=2;HaplotypeScore=100.5160;InbreedingCoeff=0.9998;MQ=78.91;MQ0=0;MQRankSum=0.647;QD=47.22;ReadPosRankSum=-0.210;VQSLOD=4.3067;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,51:53:99:2324,126,0	1/1:0,13:13:33.11:617,33,0	0/0:22,0:23:52.07:0,52,715	0/0:15,0:15:27.13:0,27,466	0/0:30,0:30:84.28:0,84,1236	0/0:25,0:25:75.24:0,75,1084	0/0:21,0:21:60.17:0,60,843	1/1:3,38:41:99:2065,113,0	0/0:30,0:30:87.29:0,87,1279	0/0:34,0:34:99:0,99,1453	0/0:20,0:20:51.17:0,51,743	0/0:35,0:35:99:0,99,1452	0/0:36,0:36:99:0,108,1547	0/0:32,0:32:96.31:0,96,1388	0/0:39,0:39:99:0,111,1614	0/0:40,0:40:99:0,111,1634	1/1:1,28:31:63.22:1180,63,0	1/1:0,27:27:69.24:1293,69,0	1/1:0,15:16:48.14:858,48,0	1/1:0,21:22:63.22:1180,63,0	1/1:1,42:43:99:2020,108,0	0/0:30,0:30:81.25:0,81,1162	0/0:21,0:21:57.19:0,57,839	0/0:34,0:34:99:0,99,1457	0/0:21,0:21:57.18:0,57,812	0/0:26,0:26:78.26:0,78,1149	1/1:1,27:28:75.26:1401,75,0	0/0:16,0:16:48.16:0,48,707
chr10	108321272	.	A	AC	4225.45	PASS	AB=0.805;AC=18;AF=0.321;AN=56;BaseQRankSum=-11.080;DP=609;FS=2.157;HRun=8;HaplotypeScore=63.3290;InbreedingCoeff=0.8535;MQ=86.18;MQ0=0;MQRankSum=-0.135;QD=18.21;ReadPosRankSum=-0.234;VQSLOD=4.6619;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,25:32:29.71:592,30,0	1/1:3,8:11:18.05:206,18,0	0/1:24,0:24:16.68:17,0,277	0/0:15,0:17:16.92:0,17,171	0/0:17,0:17:45.50:0,45,412	0/0:17,0:17:42.01:0,42,384	0/0:20,0:20:54.03:0,54,494	1/1:7,12:20:27.05:291,27,0	0/0:31,0:31:81.01:0,81,736	0/0:22,0:22:45:0,45,408	0/0:13,0:13:33.01:0,33,301	0/0:29,0:29:75.02:0,75,686	0/0:24,0:24:62.96:0,63,562	0/0:23,0:23:63.02:0,63,575	0/0:36,0:36:96.04:0,96,878	0/0:25,0:25:69.04:0,69,631	1/1:13,26:39:7.90:845,8,0	1/1:1,18:19:26.70:561,27,0	0/1:9,16:25:0.87:454,0,1	1/1:3,14:17:11.65:387,12,0	1/1:3,22:25:29.70:596,30,0	0/0:11,0:11:27.01:0,27,247	0/0:11,0:11:27.01:0,27,246	0/0:37,1:38:93:0,93,845	0/0:10,0:10:24.01:0,24,219	0/0:27,0:26:66.02:0,66,601	1/1:4,16:20:24.07:277,24,0	0/0:6,0:6:18.01:0,18,163
chr10	108322559	.	TGATA	T	543.17	PASS	AB=0.927;AC=5;AF=0.089;AN=56;BaseQRankSum=7.525;DP=742;FS=11.430;HRun=0;HaplotypeScore=126.8092;InbreedingCoeff=0.2603;MQ=39.29;MQ0=86;MQRankSum=-5.781;QD=7.34;ReadPosRankSum=0.288;VQSLOD=2.1938;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,1:19:23.51:62,0,24	0/1:11,0:11:7.57:8,0,143	0/0:69,0:7:14.26:0,14,218	0/0:86,0:8:20.55:0,21,344	0/0:16,0:15:35.95:0,36,760	0/0:16,0:14:11.85:0,12,684	0/0:26,0:23:53.92:0,54,1168	0/0:30,0:24:47.84:0,48,1124	0/0:26,0:20:44.67:0,45,1053	0/0:31,0:23:63.22:0,63,1512	0/0:15,0:13:27.09:0,27,547	0/0:27,0:23:34.11:0,34,834	0/0:10,0:9:21.07:0,21,456	0/0:27,0:26:20.22:0,20,1046	0/0:18,0:15:20.73:0,21,474	0/0:25,1:20:38.17:0,38,874	0/1:22,0:21:43.38:434,0,43	1/1:17,0:12:5.84:150,6,0	0/0:25,0:16:44.56:0,45,807	0/0:12,0:10:12.02:0,12,242	0/0:68,4:66:77.41:0,77,1792	0/0:17,0:14:30.10:0,30,708	0/0:17,0:15:26.66:0,27,576	0/0:43,0:40:67.91:0,68,1435	0/0:14,0:14:30.97:0,31,630	0/0:25,0:22:62.95:0,63,1345	0/0:14,0:13:27.09:0,27,595	0/0:5,0:5:12.04:0,12,280
chr10	108322560	.	GAT	G	686.45	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=7.144;DP=740;FS=14.820;HRun=0;HaplotypeScore=110.7492;InbreedingCoeff=0.8271;MQ=39.46;MQ0=84;MQRankSum=-3.503;QD=9.53;ReadPosRankSum=0.989;VQSLOD=2.2834;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,4:19:12.46:163,12,0	0/1:11,0:9:4.49:4,0,79	0/0:69,0:7:14.83:0,15,154	0/0:87,0:9:25.72:0,26,283	0/0:17,0:16:35.87:0,36,489	0/0:17,0:15:24.11:0,24,498	0/0:26,0:23:18.38:0,18,702	0/0:29,0:24:34.21:0,34,729	0/0:24,0:20:41.04:0,41,664	0/0:31,0:23:63.19:0,63,990	0/0:14,0:13:23.96:0,24,308	0/0:28,0:23:34.55:0,35,547	0/0:11,0:10:23.91:0,24,282	0/0:25,0:26:25.44:0,25,660	0/0:17,0:14:21.05:0,21,315	0/0:25,0:19:24.60:0,25,501	1/1:13,5:21:15.59:430,16,0	1/1:12,3:12:23.73:228,24,0	0/0:22,0:16:39.50:0,39,535	0/0:13,0:10:11.96:0,12,139	0/0:69,0:66:34.36:0,34,1081	0/0:18,0:14:27.08:0,27,397	0/0:16,0:15:18.29:0,18,332	0/0:38,0:37:54.76:0,55,897	0/0:14,0:14:23.68:0,24,339	0/0:26,0:23:64.04:0,64,937	0/0:14,0:13:23.95:0,24,346	0/0:5,0:5:12.04:0,12,167
chr10	108322597	.	GGTGT	G	1167.35	PASS	AB=0.760;AC=10;AF=0.179;AN=56;BaseQRankSum=7.156;DP=783;FS=5.308;HRun=0;HaplotypeScore=154.7614;InbreedingCoeff=0.6893;MQ=43.79;MQ0=75;MQRankSum=-6.364;QD=6.34;ReadPosRankSum=-0.830;VQSLOD=2.3148;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:26.80:0,27,319	1/1:10,3:13:12.85:176,13,0	0/0:56,0:9:10.53:0,11,393	0/0:71,0:8:18.39:0,18,240	0/0:23,0:19:39.13:0,39,911	0/0:19,0:19:7.30:0,7,970	0/0:25,0:26:57.20:0,57,1381	1/1:26,15:33:20.99:250,21,0	0/0:33,0:30:68.74:0,69,1595	0/0:33,0:27:36.12:0,36,815	0/0:20,0:20:45.15:0,45,1015	0/0:36,0:31:67.41:0,67,1584	0/0:24,0:22:56.86:0,57,1231	0/0:23,0:21:50.96:0,51,1078	0/0:16,0:13:30.10:0,30,714	0/0:26,0:22:44.94:0,45,963	0/0:17,0:16:2.97:0,3,110	0/0:18,0:15:12.62:0,13,170	0/1:25,3:13:49.51:210,0,50	0/1:8,12:19:8.01:109,0,8	1/1:55,10:62:16.96:257,17,0	0/0:14,0:11:21.07:0,21,467	0/0:22,0:20:30.09:0,30,696	0/0:47,0:44:93.82:0,94,2153	0/0:22,0:21:38.22:0,38,908	0/0:26,0:23:50.12:0,50,989	1/1:6,6:11:21.01:330,21,0	0/0:5,0:4:9.03:0,9,181
chr10	108322633	.	G	GGT	3213.82	PASS	AB=0.781;AC=12;AF=0.214;AN=56;BaseQRankSum=4.545;DP=764;FS=3.387;HRun=0;HaplotypeScore=151.0012;InbreedingCoeff=0.7765;MQ=54.48;MQ0=28;MQRankSum=-7.088;QD=13.50;ReadPosRankSum=-4.936;VQSLOD=2.5434;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.06:0,72,843	1/1:6,5:11:18.06:278,18,0	0/1:80,0:16:7.01:7,0,115	0/0:85,0:17:2.82:0,3,138	0/0:17,0:17:42.12:0,42,513	0/0:23,0:23:54.16:0,54,684	0/0:32,0:32:75.23:0,75,941	1/1:27,12:35:21.99:844,22,0	0/0:34,0:34:64.66:0,65,949	0/0:16,0:17:21.51:0,22,452	0/0:26,0:26:69.19:0,69,852	0/0:34,0:33:55.50:0,55,695	0/0:23,0:23:52.42:0,52,681	0/0:21,0:20:40.61:0,41,519	0/0:17,0:16:39.12:0,39,492	0/0:20,0:21:56.84:0,57,685	0/0:14,0:14:39.04:0,39,455	0/0:15,0:15:25.70:0,26,339	1/1:12,7:16:13.90:305,14,0	1/1:5,13:17:32.85:506,33,0	1/1:16,42:57:71.72:1161,72,0	0/0:11,0:11:33.11:0,33,419	0/0:10,0:9:18.04:0,18,211	0/0:46,0:44:83.22:0,83,1222	0/0:19,0:19:54.17:0,54,686	0/0:23,0:22:35.67:0,36,413	0/1:2,6:9:8.26:289,0,8	0/0:7,0:7:21.07:0,21,267
chr10	108324836	.	TCAAAAGACAAAAA	T	4642.50	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.353;DP=795;FS=3.738;HRun=0;HaplotypeScore=283.3394;InbreedingCoeff=0.9999;MQ=71.71;MQ0=0;MQRankSum=-10.648;QD=74.88;ReadPosRankSum=1.593;VQSLOD=4.5215;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,17:23:36.12:1427,36,0	0/0:12,0:12:36.12:0,36,2299	0/0:38,0:37:99:0,108,5211	0/0:24,0:23:69.21:0,69,3450	0/0:30,0:30:90.31:0,90,5609	0/0:21,0:21:63.20:0,63,3428	0/0:32,0:32:96.30:0,96,5756	0/0:35,0:35:96.33:0,96,5551	0/0:37,0:37:99:0,111,7007	0/0:36,0:36:99:0,108,6275	0/0:14,0:14:42.14:0,42,2580	0/0:32,0:32:96.31:0,96,5658	0/0:38,0:38:99:0,111,6548	0/0:32,0:32:90.30:0,90,5453	0/0:34,0:34:99:0,102,6475	0/0:32,0:32:96.33:0,96,5875	1/1:4,16:20:42.14:1417,42,0	1/1:3,16:19:45.15:1798,45,0	0/0:26,0:26:78.27:0,78,4848	0/0:21,0:21:63.20:0,63,3852	0/0:47,0:47:99:0,138,7841	0/0:27,0:27:81.28:0,81,5073	0/0:22,0:22:63.22:0,63,4115	0/0:39,0:39:99:0,117,6573	0/0:23,0:23:69.24:0,69,4510	0/0:29,0:29:87.30:0,87,5187	0/0:32,0:31:96.30:0,96,5686	0/0:20,0:20:60.18:0,60,3839
chr10	108327645	.	CGT	C	985.10	PASS	AB=0.950;AC=19;AF=0.352;AN=54;BaseQRankSum=3.872;DP=694;FS=0.463;HRun=0;HaplotypeScore=98.7547;InbreedingCoeff=0.1046;MQ=55.34;MQ0=11;MQRankSum=0.664;QD=2.60;ReadPosRankSum=-0.576;VQSLOD=1.9633;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:0.47:0,0,2	0/1:6,0:6:3.46:17,0,3	0/0:12,0:8:0:0,0,0	./.	0/0:15,0:15:23.23:0,23,244	0/1:19,0:18:12.37:12,0,236	0/1:34,0:34:51.07:51,0,289	1/1:22,14:33:34.53:220,35,0	0/0:35,0:33:54.08:0,54,610	0/1:25,0:24:7.12:7,0,223	0/1:15,0:15:33.32:33,0,73	0/1:38,1:39:18.51:19,0,531	0/0:28,0:28:23.73:0,24,304	0/0:35,0:35:37.25:0,37,550	0/1:37,0:37:20.42:20,0,576	0/0:29,0:28:32.89:0,33,523	0/1:15,0:15:10.95:11,0,21	0/0:10,0:10:6.87:0,7,49	1/1:14,0:14:11.17:107,11,0	1/1:16,1:17:25.71:182,26,0	0/1:31,39:68:15.45:15,0,18	0/0:23,0:21:14.08:0,14,152	0/1:18,0:18:28.45:28,0,217	0/0:47,0:46:34.18:0,34,907	0/0:26,0:25:6.24:0,6,273	0/0:27,0:26:11.73:0,12,360	1/1:27,0:29:55.14:407,55,0	0/1:4,1:5:23.53:24,0,66
chr10	108327657	.	T	TGC	51.18	PASS	AB=0.864;AC=5;AF=0.089;AN=56;BaseQRankSum=2.788;DP=678;FS=1.098;HRun=0;HaplotypeScore=103.1939;InbreedingCoeff=0.3929;MQ=53.06;MQ0=11;MQRankSum=-2.615;QD=1.07;ReadPosRankSum=-2.585;VQSLOD=0.8996;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:19:6.28:42,6,0	0/0:7,0:7:7.94:0,8,46	0/0:4,0:1:3.01:0,3,42	0/1:5,0:2:0.91:1,0,12	0/0:15,0:15:33.05:0,33,409	0/0:20,0:19:42.03:0,42,475	0/0:33,0:33:60.92:0,61,704	0/0:35,0:32:82.91:0,83,699	0/0:34,0:33:85.48:0,85,1032	0/0:23,0:22:54.29:0,54,648	0/0:15,0:15:35.84:0,36,360	0/0:38,0:38:94.37:0,94,1098	0/0:28,0:28:77.62:0,78,862	0/0:29,0:29:69.15:0,69,884	0/0:36,0:36:85.53:0,86,1094	0/0:29,0:28:78.07:0,78,932	0/1:4,9:13:26.47:26,0,28	0/1:10,0:10:2.94:88,0,3	0/0:13,0:13:29.82:0,30,239	0/0:15,0:15:36.04:0,36,387	0/0:70,0:68:53.74:0,54,449	0/0:25,0:23:51.04:0,51,566	0/0:18,0:18:35.57:0,36,433	0/0:51,0:50:99:0,105,1537	0/0:29,0:28:60.53:0,61,672	0/0:26,0:25:74.79:0,75,847	0/0:31,0:31:84.24:0,84,800	0/0:6,0:6:14.64:0,15,155
chr10	108327667	.	T	TGA	49.40	PASS	AB=1.000;AC=7;AF=0.135;AN=52;BaseQRankSum=4.011;DP=645;FS=2.649;HRun=0;HaplotypeScore=109.9959;InbreedingCoeff=0.6613;MQ=52.93;MQ0=10;MQRankSum=-1.179;QD=1.12;ReadPosRankSum=-0.149;VQSLOD=2.2693;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:18:0.47:1,0,0	1/1:1,6:7:7.68:129,8,0	./.	./.	0/0:16,0:16:33.05:0,33,405	0/0:21,0:20:41.98:0,42,448	0/0:35,0:35:59.59:0,60,671	0/0:32,0:29:43.77:0,44,262	0/0:37,0:37:88.04:0,88,1015	0/0:21,0:20:27.53:0,28,480	0/0:12,0:12:26.60:0,27,281	0/0:40,0:40:88.43:0,88,991	0/0:23,0:24:63.37:0,63,730	0/0:27,0:27:63.50:0,63,815	0/0:36,0:36:87.94:0,88,1087	0/0:29,0:28:72.05:0,72,882	1/1:9,0:9:1.88:11,2,0	0/1:9,0:9:2:2,0,72	0/0:10,0:10:19.53:0,20,120	0/0:13,0:14:10.73:0,11,102	0/0:62,0:60:32.43:0,32,275	0/0:25,0:23:42.06:0,42,483	0/0:18,0:18:32.56:0,33,399	0/0:55,0:54:99:0,113,1527	0/0:25,0:25:45.54:0,46,541	0/0:23,0:22:59.39:0,59,672	0/0:30,0:30:26.52:0,27,343	0/0:8,0:8:17.62:0,18,178
chr10	108329322	.	AGT	A	97.86	PASS	AB=0.980;AC=14;AF=0.350;AN=40;BaseQRankSum=3.621;DP=548;FS=2.725;HRun=0;HaplotypeScore=70.6087;InbreedingCoeff=0.1859;MQ=72.12;MQ0=6;MQRankSum=-0.353;QD=0.50;ReadPosRankSum=1.120;VQSLOD=1.1373;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:5,0:5:2.84:14,3,0	./.	./.	0/0:15,0:15:5.47:0,5,65	0/0:23,0:23:16.56:0,17,180	0/1:19,1:20:22.54:23,0,59	./.	0/0:13,0:13:3.01:0,3,44	0/0:16,0:16:9.03:0,9,115	./.	1/1:19,3:22:6.01:63,6,0	./.	0/0:15,0:15:3:0,3,25	0/0:20,0:20:12.01:0,12,132	0/0:14,0:13:9:0,9,93	0/0:28,0:28:0:0,0,0	1/1:18,0:19:4.88:20,5,0	./.	./.	1/1:41,0:41:2.80:13,3,0	0/1:17,0:17:8.22:8,0,125	0/0:15,0:15:3.01:0,3,36	0/1:29,1:30:51.64:52,0,154	0/0:24,0:24:3:0,3,25	0/1:19,0:19:16.14:16,0,75	1/1:18,0:20:2.84:14,3,0	0/0:14,0:12:6.02:0,6,81
chr10	108329530	.	T	TAATA	10183.49	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-11.609;DP=659;FS=2.122;HRun=0;HaplotypeScore=103.2812;InbreedingCoeff=0.9988;MQ=63.95;MQ0=8;MQRankSum=-4.417;QD=53.04;ReadPosRankSum=0.882;VQSLOD=6.0682;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:32:66.70:1676,67,0	1/1:2,10:12:24.08:623,24,0	0/0:19,0:14:27.03:0,27,485	0/0:29,0:22:57.18:0,57,956	0/0:32,0:32:90.29:0,90,1564	0/0:24,0:24:60.21:0,60,1078	0/0:26,0:26:30.04:0,30,969	1/1:4,12:18:42.13:998,42,0	0/0:31,0:31:81.25:0,81,1373	0/0:30,0:30:74.97:0,75,1326	0/0:12,0:12:28.34:0,28,536	0/0:21,0:21:63.18:0,63,1065	0/0:20,0:20:54.19:0,54,971	0/0:31,0:31:87.27:0,87,1525	0/0:46,0:46:99:0,117,1984	0/0:24,0:24:72.23:0,72,1260	1/1:2,13:18:27.09:701,27,0	1/1:1,15:16:35.97:836,36,0	1/1:1,7:8:24.08:585,24,0	1/1:6,25:32:81.23:1930,81,0	1/1:7,17:24:42.49:918,42,0	0/0:26,0:26:75.26:0,75,1348	0/0:16,0:16:48.16:0,48,862	0/0:20,0:20:57.18:0,57,995	0/0:15,0:15:42.14:0,42,738	0/0:31,0:31:78.27:0,78,1402	1/1:4,24:30:78.22:1916,78,0	0/0:14,0:14:42.14:0,42,751
chr10	108330548	.	AGT	A	2546.43	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.425;DP=605;FS=2.237;HRun=0;HaplotypeScore=68.9523;InbreedingCoeff=0.9991;MQ=80.99;MQ0=0;MQRankSum=-1.602;QD=32.23;ReadPosRankSum=3.525;VQSLOD=5.8467;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,44:46:99:1471,105,0	0/0:11,0:11:30.10:0,30,540	0/0:14,0:14:33.11:0,33,587	0/0:18,0:17:48.16:0,48,837	0/0:27,0:27:72.25:0,72,1276	0/0:30,0:30:87.30:0,87,1556	0/0:14,0:14:42.12:0,42,725	0/0:37,0:37:99:0,99,1722	0/0:30,0:30:84.29:0,84,1506	0/0:22,0:22:66.21:0,66,1134	0/0:10,0:10:27.09:0,27,486	0/0:15,0:15:45.15:0,45,810	0/0:20,0:20:60.20:0,60,1052	0/0:17,0:17:51.17:0,51,902	0/0:29,0:29:84.29:0,84,1511	0/0:22,0:22:60.21:0,60,1069	1/1:0,14:14:39.13:546,39,0	1/1:2,17:19:48.16:672,48,0	0/0:18,0:18:54.18:0,54,931	0/0:21,0:21:57.20:0,57,1019	0/0:22,0:22:66.21:0,66,1151	0/0:25,0:25:72.25:0,72,1295	0/0:15,0:15:42.14:0,42,756	0/0:15,0:15:42.14:0,42,748	0/0:26,0:26:69.24:0,69,1236	0/0:33,0:33:93.31:0,93,1648	0/0:25,0:25:75.26:0,75,1329	0/0:10,0:10:30.10:0,30,540
chr10	108332919	.	CGT	C	47.19	PASS	AB=0.973;AC=8;AF=0.167;AN=48;BaseQRankSum=0.919;DP=655;FS=2.245;HRun=0;HaplotypeScore=85.5796;InbreedingCoeff=-0.0317;MQ=66.58;MQ0=9;MQRankSum=0.637;QD=0.24;ReadPosRankSum=1.732;VQSLOD=1.1606;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:19.03:0,19,156	./.	0/0:22,0:13:0:0,0,0	./.	0/0:17,0:17:2.92:0,3,17	0/0:18,0:17:7.25:0,7,71	0/1:32,0:31:4.13:4,0,225	./.	0/0:21,1:22:5.41:0,5,108	0/0:20,0:20:11.95:0,12,97	0/0:12,0:12:5.99:0,6,50	0/1:26,1:27:18.02:18,0,127	0/0:17,0:17:11.77:0,12,83	0/1:21,1:22:22.36:22,0,58	0/1:32,1:33:49.80:50,0,104	0/0:22,0:22:6.83:0,7,133	0/0:23,0:22:11.98:0,12,115	0/1:27,1:28:30.45:30,0,185	./.	0/0:6,0:6:8.99:0,9,74	0/0:79,0:78:34.28:0,34,454	0/0:19,0:19:2.98:0,3,22	1/1:9,2:11:3:32,3,0	0/1:45,1:45:6.78:7,0,313	0/0:19,0:19:7.55:0,8,54	0/0:33,0:32:20.13:0,20,137	0/0:18,0:17:22.78:0,23,206	0/0:3,0:2:3.01:0,3,34
chr10	108334508	.	GA	G	3671.14	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.453;DP=734;FS=7.060;HRun=4;HaplotypeScore=72.0684;InbreedingCoeff=0.9994;MQ=84.29;MQ0=0;MQRankSum=-2.630;QD=33.07;ReadPosRankSum=3.462;VQSLOD=4.3253;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,52:54:99:1728,144,0	0/0:11,0:11:30.10:0,30,420	0/0:24,0:24:63.10:0,63,833	0/0:24,0:24:65.82:0,66,790	0/0:20,0:20:57.16:0,57,760	0/0:15,0:15:42.14:0,42,587	0/0:33,0:33:93.28:0,93,1258	0/0:24,0:24:72.24:0,72,996	0/0:31,0:31:84.27:0,84,1160	0/0:31,0:31:90.29:0,90,1243	0/0:9,0:9:27.08:0,27,357	0/0:31,0:31:90.27:0,90,1224	0/0:27,0:27:78.24:0,78,1070	0/0:39,0:39:99:0,111,1500	0/0:35,0:35:99:0,102,1404	0/0:22,0:22:60.19:0,60,819	1/1:0,29:29:81.25:971,81,0	1/1:0,28:28:81.25:972,81,0	0/0:17,0:17:51.17:0,51,703	0/0:25,0:25:75.03:0,75,955	0/0:53,0:53:99:0,151,2099	0/0:13,0:13:36.07:0,36,466	0/0:20,0:20:60.19:0,60,823	0/0:34,0:34:99:0,99,1381	0/0:21,0:21:63.19:0,63,859	0/0:26,0:26:75.24:0,75,1035	0/0:23,0:23:69.23:0,69,959	0/0:15,0:15:42.14:0,42,587
chr10	108335058	.	C	CG	10692.82	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-3.006;DP=683;FS=7.829;HRun=2;HaplotypeScore=75.6805;InbreedingCoeff=0.9943;MQ=83.41;MQ0=0;MQRankSum=-7.797;QD=37.78;ReadPosRankSum=0.676;VQSLOD=5.2346;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,51:53:99:1940,135,0	1/1:1,7:8:21.07:301,21,0	0/0:23,0:23:57.10:0,57,668	0/0:17,0:17:30.48:0,30,511	0/0:23,0:23:63.19:0,63,770	0/0:21,0:21:60.18:0,60,731	0/0:33,0:33:84.26:0,84,1039	1/1:4,26:30:75.23:1056,75,0	0/0:15,0:15:45.14:0,45,558	0/0:36,0:36:99:0,105,1301	0/0:14,0:14:39.12:0,39,482	0/0:27,0:27:78.24:0,78,966	0/0:19,0:19:53.88:0,54,666	0/0:36,0:36:99:0,99,1213	0/0:27,0:27:81.24:0,81,991	0/0:6,0:6:15.05:0,15,186	1/1:2,35:37:96.32:1382,96,0	1/1:2,47:49:99:1986,138,0	1/1:1,18:19:54.13:733,54,0	1/1:0,18:18:48.16:687,48,0	1/1:2,46:48:99:1792,126,0	0/0:23,0:23:66.21:0,66,816	0/0:14,0:14:36.11:0,36,436	0/0:30,0:30:87.27:0,87,1077	0/0:16,0:16:48.15:0,48,594	0/0:14,0:14:39.12:0,39,482	1/1:2,19:21:57.19:815,57,0	0/0:6,0:6:15.05:0,15,186
chr10	108336213	.	TCCC	T	3939.29	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.459;DP=600;FS=7.677;HRun=4;HaplotypeScore=83.8968;InbreedingCoeff=0.9980;MQ=79.27;MQ0=0;MQRankSum=-3.986;QD=41.03;ReadPosRankSum=2.794;VQSLOD=2.0658;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,40:41:96.33:1670,96,0	0/0:9,0:9:27.09:0,27,636	0/0:14,0:14:36.11:0,36,759	0/0:18,0:17:44.34:0,44,831	0/0:24,0:24:69.22:0,69,1535	0/0:19,0:19:57.20:0,57,1344	0/0:17,0:17:51.16:0,51,1134	0/0:25,0:25:72.23:0,72,1529	0/0:26,0:26:78.26:0,78,1800	0/0:18,0:18:54.19:0,54,1260	0/0:11,0:11:33.11:0,33,780	0/0:18,0:18:54.19:0,54,1214	0/0:23,0:23:69.24:0,69,1612	0/0:17,0:17:51.18:0,51,1182	0/0:22,0:22:66.23:0,66,1497	0/0:24,0:24:72.25:0,72,1702	1/1:0,36:36:90.31:1582,90,0	1/1:0,19:19:39.13:687,39,0	0/0:16,0:16:48.16:0,48,1088	0/0:21,0:21:63.22:0,63,1420	0/0:32,0:32:93.26:0,93,2086	0/0:20,0:20:60.19:0,60,1348	0/0:19,0:19:57.17:0,57,1214	0/0:34,0:34:99:0,102,2381	0/0:18,0:18:51.16:0,51,1162	0/0:34,0:34:99:0,99,2271	0/0:18,0:18:54.17:0,54,1231	0/0:7,0:7:21.06:0,21,423
chr10	108338632	.	TC	T	2715.50	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.538;DP=722;FS=5.701;HRun=4;HaplotypeScore=82.5164;InbreedingCoeff=0.9885;MQ=86.11;MQ0=0;MQRankSum=-2.401;QD=30.86;ReadPosRankSum=3.834;VQSLOD=4.1957;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:34:84.24:993,84,0	0/0:16,0:16:45.05:0,45,549	0/0:30,0:27:66.64:0,67,885	0/0:23,0:22:62.90:0,63,785	0/0:17,0:17:39.09:0,39,481	0/0:17,0:17:39.11:0,39,514	0/0:40,0:40:99:0,105,1312	0/0:24,0:24:45.14:0,45,613	0/0:39,0:39:99:0,114,1473	0/0:29,0:29:78.24:0,78,1058	0/0:15,0:15:39.09:0,39,495	0/0:36,0:37:99:0,105,1324	0/0:27,0:27:69.09:0,69,841	0/0:33,0:33:96.27:0,96,1266	0/0:33,0:33:93.25:0,93,1206	0/0:30,0:30:90.26:0,90,1198	1/1:1,25:26:78.24:931,78,0	1/1:0,28:28:78.24:935,78,0	0/0:23,0:23:60.14:0,60,771	0/0:25,0:25:66.14:0,66,836	0/0:46,0:46:99:0,120,1568	0/0:13,0:13:30.06:0,30,355	0/0:11,0:11:27.06:0,27,341	0/0:33,0:33:96.26:0,96,1290	0/0:22,0:22:63.14:0,63,769	0/0:22,0:22:48.13:0,48,624	0/0:25,0:25:72.09:0,72,861	0/0:4,0:4:12.04:0,12,168
chr10	108340097	.	CATGAAT	C	4230.98	PASS	AB=0.944;AC=16;AF=0.308;AN=52;BaseQRankSum=11.330;DP=571;FS=10.727;HRun=0;HaplotypeScore=133.1314;InbreedingCoeff=0.7031;MQ=61.09;MQ0=2;MQRankSum=2.479;QD=21.37;ReadPosRankSum=-0.235;VQSLOD=4.0797;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,4:19:26.76:609,27,0	./.	0/0:8,0:3:0:0,0,0	0/0:7,0:4:7.27:0,7,87	0/0:32,0:32:96.33:0,96,2410	0/0:27,0:27:81.28:0,81,1980	0/1:7,0:8:5.06:5,0,439	1/1:4,30:34:72.60:1502,73,0	0/0:25,0:25:69.22:0,69,1570	0/0:32,0:32:93.32:0,93,2415	0/0:30,0:30:81.26:0,81,1996	0/0:19,0:19:56.85:0,57,1156	0/0:18,0:18:54.10:0,54,1256	0/0:14,0:14:42.14:0,42,1053	0/1:22,0:22:11.52:12,0,1211	0/0:29,0:28:84.29:0,84,2053	1/1:21,0:21:6.12:720,6,0	1/1:11,3:14:35.93:732,36,0	1/1:4,6:9:2.17:385,2,0	1/1:0,32:32:2.67:67,3,0	./.	0/0:9,0:9:21.07:0,21,544	0/0:14,0:14:42.10:0,42,944	0/0:5,0:5:15.05:0,15,331	0/0:44,0:44:99:0,132,3508	0/0:25,0:25:72.18:0,72,1910	1/1:1,37:38:8.77:201,9,0	0/0:22,0:22:66.23:0,66,1737
chr10	108340157	.	C	CATAT	393.64	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=3.499;DP=567;FS=2.130;HRun=0;HaplotypeScore=99.9143;InbreedingCoeff=0.7701;MQ=56.40;MQ0=23;MQRankSum=-1.217;QD=6.67;ReadPosRankSum=1.928;VQSLOD=2.3595;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:24:4.43:155,4,0	./.	0/0:3,0:1:3.01:0,3,51	0/0:3,0:2:6.02:0,6,82	0/0:31,0:30:81.25:0,81,1388	0/0:29,0:29:78.21:0,78,1259	0/0:12,0:12:30.06:0,30,499	0/0:47,0:16:48.16:0,48,850	0/0:12,0:12:33.09:0,33,543	0/0:38,0:38:99:0,111,1899	0/0:25,0:25:69.18:0,69,1110	0/0:17,0:17:51.16:0,51,849	0/0:16,0:15:42.11:0,42,698	0/0:14,0:14:36.12:0,36,645	0/0:19,0:19:33.73:0,34,636	0/0:30,0:29:87.22:0,87,1407	1/1:3,19:23:6.14:160,6,0	1/1:4,8:12:12.09:197,12,0	0/0:20,0:14:7.47:0,7,463	0/0:29,0:29:19.97:0,20,469	0/0:6,0:6:18.03:0,18,287	0/0:7,0:7:15.03:0,15,231	0/0:11,0:10:26.80:0,27,374	0/0:9,0:9:27.08:0,27,419	0/0:33,0:33:87.89:0,88,1604	0/0:26,0:26:78.22:0,78,1286	0/0:46,0:46:46.01:0,46,1153	0/0:25,0:25:75.12:0,75,1154
chr10	108340901	.	T	TAC	8951.32	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-15.984;DP=537;FS=20.087;HRun=0;HaplotypeScore=60.0762;InbreedingCoeff=0.9994;MQ=78.10;MQ0=2;MQRankSum=-2.488;QD=46.14;ReadPosRankSum=-0.281;VQSLOD=3.8217;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:31:90.31:1649,90,0	0/0:8,0:8:24.07:0,24,326	0/0:18,0:18:49.38:0,49,664	0/0:18,0:17:31.23:0,31,445	0/0:21,0:21:54.17:0,54,755	0/0:16,0:16:48.16:0,48,687	0/0:10,0:10:30.07:0,30,392	1/1:5,27:32:81.26:1427,81,0	0/0:14,0:14:42.12:0,42,583	0/0:22,0:22:60.20:0,60,846	0/0:13,0:13:36.10:0,36,497	0/0:16,0:16:45.15:0,45,645	0/0:21,0:21:60.17:0,60,821	0/0:18,0:18:48.15:0,48,667	0/0:12,0:12:33.11:0,33,473	0/0:21,0:21:63.19:0,63,881	1/1:1,27:29:66.23:1210,66,0	1/1:1,19:20:45.15:825,45,0	1/1:0,13:13:36.12:655,36,0	1/1:3,25:28:69.24:1265,69,0	1/1:0,22:22:63.22:1155,63,0	0/0:13,0:13:39.10:0,39,537	0/0:20,0:20:54.15:0,54,735	0/0:15,0:15:45.13:0,45,624	0/0:24,0:24:72.23:0,72,1013	0/0:18,0:18:51.17:0,51,731	1/1:0,16:16:42.14:767,42,0	0/0:25,0:25:69.16:0,69,924
chr10	108341665	.	T	TAAA	3135.93	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=3.387;DP=359;FS=7.884;HRun=10;HaplotypeScore=57.7420;InbreedingCoeff=0.8959;MQ=56.12;MQ0=6;MQRankSum=-5.242;QD=22.08;ReadPosRankSum=-1.191;VQSLOD=0.9338;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:25:27.09:397,27,0	1/1:2,0:4:2.99:23,3,0	0/0:9,0:7:21.03:0,21,219	0/0:3,0:2:2.53:0,3,32	0/0:10,0:10:27.05:0,27,328	0/0:19,0:19:54.14:0,54,656	0/0:8,0:8:21.05:0,21,255	1/1:13,14:23:36.12:672,36,0	0/0:12,0:13:29.98:0,30,346	0/0:11,0:11:33.10:0,33,401	0/0:11,0:11:27.02:0,27,328	0/0:16,0:16:45.13:0,45,535	0/0:13,0:13:30.05:0,30,365	0/0:15,0:15:42.10:0,42,510	0/0:18,0:18:45.13:0,45,547	0/0:15,0:15:33.05:0,33,401	1/1:12,2:25:36.59:546,37,0	1/1:6,1:9:18.06:272,18,0	1/1:7,7:16:30.08:513,30,0	1/1:5,9:14:24.08:436,24,0	1/1:0,4:5:7.27:118,7,0	0/0:2,0:2:3.01:0,3,36	0/0:6,0:6:15.03:0,15,182	0/0:7,0:7:21.02:0,21,238	0/0:19,0:19:54.17:0,54,657	0/0:15,0:15:42.12:0,42,501	1/1:5,5:11:22.61:362,23,0	0/0:7,0:7:21.06:0,21,255
chr10	108342479	.	TG	T	1285.04	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.376;DP=420;FS=2.537;HRun=9;HaplotypeScore=48.3798;InbreedingCoeff=0.9123;MQ=72.01;MQ0=2;MQRankSum=2.197;QD=19.47;ReadPosRankSum=3.748;VQSLOD=3.8759;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,26:32:71.73:659,72,0	0/0:6,0:6:12.04:0,12,138	0/0:18,0:15:25.26:0,25,312	0/0:16,0:10:14.51:0,15,126	0/0:7,0:7:12.03:0,12,134	0/0:21,1:22:29.71:0,30,595	0/0:27,0:27:60.61:0,61,665	0/0:19,0:19:42.12:0,42,485	0/0:11,0:12:33.10:0,33,381	0/0:14,0:14:36.09:0,36,404	0/0:6,0:6:9.02:0,9,92	0/0:15,0:15:36.11:0,36,415	0/0:21,0:21:57.17:0,57,654	0/0:12,0:12:36.11:0,36,415	0/0:16,0:16:45.12:0,45,507	0/0:11,0:12:23.90:0,24,257	1/1:4,17:21:51.02:467,51,0	1/1:1,12:13:33.02:302,33,0	0/0:5,0:5:15.04:0,15,170	0/0:13,0:13:30.06:0,30,330	0/0:22,0:22:54.11:0,54,598	0/0:9,0:9:24.06:0,24,268	0/0:11,0:11:21.06:0,21,242	0/0:7,0:7:9.03:0,9,104	0/0:5,0:5:12:0,12,125	0/0:18,1:19:17.68:0,18,457	0/0:17,0:17:51.10:0,51,564	0/0:21,2:23:35.68:0,36,646
chr10	108342763	.	C	CTCAGCAGGCAGACCCTGATCCAGGT	48474.27	PASS	AB=0.757;AC=54;AF=0.964;AN=56;BaseQRankSum=-4.104;DP=337;FS=13.997;HRun=0;HaplotypeScore=410.7173;InbreedingCoeff=-0.0534;MQ=69.51;MQ0=0;MQRankSum=-1.319;QD=143.84;ReadPosRankSum=3.301;VQSLOD=3.9335;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:27.39:1226,27,0	1/1:8,0:8:22.31:1596,22,0	0/1:9,1:12:36.11:1387,0,36	0/1:6,1:10:26.75:927,0,27	1/1:13,0:13:22.54:1768,23,0	1/1:14,0:14:26.83:2175,27,0	1/1:14,0:14:36.12:2645,36,0	1/1:9,0:9:27.09:1610,27,0	1/1:13,0:13:30.46:1801,30,0	1/1:14,0:14:35.96:2651,36,0	1/1:2,0:2:3.01:339,3,0	1/1:15,0:15:36.12:2412,36,0	1/1:16,0:16:42.09:2626,42,0	1/1:7,0:7:10.07:1109,10,0	1/1:12,0:12:26.27:1731,26,0	1/1:11,0:11:27.09:2166,27,0	1/1:10,0:10:22.32:1592,22,0	1/1:9,0:9:20.07:1587,20,0	1/1:9,0:9:27.09:1683,27,0	1/1:15,0:15:27.66:1361,28,0	1/1:9,0:9:12.04:492,12,0	1/1:12,0:12:30.98:2092,31,0	1/1:12,0:12:6.56:556,7,0	1/1:15,0:15:11:1029,11,0	1/1:18,0:18:37.81:2344,38,0	1/1:10,0:10:14.71:1876,15,0	1/1:26,0:26:65.63:4573,66,0	1/1:8,0:8:15.02:1122,15,0
chr10	108342764	.	T	TCAGCAGGCAGA	1723.67	PASS	AB=0.757;AC=24;AF=0.923;AN=26;BaseQRankSum=-2.725;DP=39;FS=8.783;HRun=0;HaplotypeScore=25.4404;InbreedingCoeff=-0.2302;MQ=148.13;MQ0=0;MQRankSum=-1.609;QD=47.88;ReadPosRankSum=-1.018;VQSLOD=0.7188;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:3:25,3,0	./.	0/1:6,0:8:45.05:537,0,45	0/1:3,1:5:36.24:185,0,36	./.	./.	./.	1/1:1,0:1:3.01:76,3,0	./.	./.	./.	1/1:3,0:3:3.01:75,3,0	1/1:2,0:3:3.01:48,3,0	1/1:2,0:2:5.51:83,6,0	1/1:1,0:1:3.01:50,3,0	1/1:1,0:1:3.01:50,3,0	./.	./.	./.	1/1:2,0:2:6:123,6,0	1/1:2,0:2:6.02:122,6,0	1/1:1,0:2:6.01:159,6,0	./.	./.	1/1:4,0:4:12.03:278,12,0	./.	./.	./.
chr10	108347882	.	C	CAG	628.56	PASS	AB=0.867;AC=11;AF=0.196;AN=56;BaseQRankSum=8.058;DP=580;FS=4.951;HRun=0;HaplotypeScore=92.6388;InbreedingCoeff=0.4920;MQ=54.56;MQ0=37;MQRankSum=-4.045;QD=5.03;ReadPosRankSum=-3.378;VQSLOD=1.2433;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:25:0.92:4,1,0	0/0:6,0:5:5.17:0,5,21	0/0:24,0:14:7.17:0,7,266	0/0:37,0:12:22.72:0,23,235	0/0:19,0:18:39.13:0,39,524	0/0:13,0:13:30.05:0,30,406	0/0:24,0:19:39.13:0,39,519	1/1:10,0:9:17.72:170,18,0	0/0:37,0:36:84.22:0,84,1082	0/0:19,0:19:54.18:0,54,735	0/0:17,0:16:21.07:0,21,270	0/0:27,0:24:47.81:0,48,568	0/0:21,0:21:31.67:0,32,515	0/0:16,0:15:33.10:0,33,430	0/0:25,0:22:34.58:0,35,468	0/0:24,0:22:45.15:0,45,597	1/1:19,0:17:1.44:4,1,0	0/1:24,0:19:11.41:11,0,17	0/1:3,6:9:8.70:246,0,9	0/0:5,0:5:3.01:0,3,32	1/1:18,0:13:5.92:95,6,0	0/0:30,0:28:38.72:0,39,507	0/0:17,0:17:33.04:0,33,433	0/0:43,0:40:72.93:0,73,934	0/0:16,0:15:20.81:0,21,281	0/0:22,0:21:45.03:0,45,637	0/1:11,0:8:6.20:235,0,6	0/0:11,0:9:18.05:0,18,220
chr10	108348337	.	AAAC	A	9084.64	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=17.685;DP=712;FS=0.636;HRun=0;HaplotypeScore=120.2529;InbreedingCoeff=0.9992;MQ=65.68;MQ0=1;MQRankSum=-7.592;QD=35.77;ReadPosRankSum=2.566;VQSLOD=5.5025;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,45:49:99:1702,114,0	1/1:2,8:10:24.05:355,24,0	0/0:28,0:26:61.12:0,61,1146	0/0:29,0:28:66.54:0,67,1308	0/0:15,0:15:36.08:0,36,671	0/0:18,0:18:51.15:0,51,1049	0/0:23,0:23:69.24:0,69,1460	1/1:1,31:32:96.32:1500,96,0	0/0:19,0:19:51.16:0,51,1050	0/0:28,0:28:84.29:0,84,1703	0/0:12,0:12:36.09:0,36,696	0/0:35,0:35:96.31:0,96,1950	0/0:28,0:28:81.28:0,81,1722	0/0:33,0:33:87.30:0,87,1839	0/0:37,0:37:99:0,102,2148	0/0:25,0:25:69.22:0,69,1367	1/1:3,31:34:69.24:1097,69,0	1/1:2,35:37:96.33:1517,96,0	1/1:1,22:23:60.15:903,60,0	1/1:2,9:11:26.97:347,27,0	1/1:6,39:45:87.03:1234,87,0	0/0:22,0:22:63.18:0,63,1241	0/0:13,0:13:36.08:0,36,742	0/0:42,0:42:99:0,123,2484	0/0:12,0:12:36.04:0,36,669	0/0:28,0:28:75.10:0,75,1392	1/1:0,13:13:27.09:430,27,0	0/0:11,0:11:29.93:0,30,561
chr10	108348833	.	CGGGGGGGGGG	C	6622.31	PASS	AB=0.800;AC=19;AF=0.339;AN=56;BaseQRankSum=6.555;DP=310;FS=1.443;HRun=18;HaplotypeScore=112.6692;InbreedingCoeff=0.6847;MQ=71.16;MQ0=4;MQRankSum=-5.851;QD=41.91;ReadPosRankSum=7.717;VQSLOD=1.8524;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,19:37:53.76:1443,54,0	1/1:1,5:7:18.03:458,18,0	0/0:28,0:9:15.05:0,15,413	0/0:26,0:18:36.95:0,37,811	0/0:3,0:3:3.01:0,3,59	0/0:8,0:9:3.01:0,3,139	0/0:12,0:15:29.57:0,30,684	1/1:14,6:19:17.58:479,18,0	0/0:1,0:2:3.01:0,3,105	0/0:7,0:7:8.39:0,8,194	0/0:2,0:2:0:0,0,0	0/0:15,0:15:18.06:0,18,676	0/0:5,0:7:3.01:0,3,100	0/0:4,0:4:6.02:0,6,264	0/0:8,0:8:9.03:0,9,371	0/0:5,0:6:6.02:0,6,226	1/1:11,9:20:29.05:726,29,0	1/1:4,10:14:26.93:718,27,0	1/1:7,9:16:26.96:719,27,0	1/1:5,4:9:14.40:328,14,0	1/1:4,5:9:12.50:313,12,0	0/0:1,0:1:0:0,0,0	0/0:1,0:1:0:0,0,0	0/0:5,0:5:6.02:0,6,253	0/0:6,0:7:3.01:0,3,126	0/1:3,0:4:0:0,0,0	1/1:4,18:22:54.07:1439,54,0	0/0:3,0:3:3.01:0,3,46
chr10	108348851	.	G	GAAA	5464.37	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=7.832;DP=351;FS=36.992;HRun=2;HaplotypeScore=97.4627;InbreedingCoeff=0.7416;MQ=70.77;MQ0=5;MQRankSum=-10.993;QD=28.76;ReadPosRankSum=4.465;VQSLOD=0.6897;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,5:28:74.96:1002,75,0	1/1:10,0:10:27.07:318,27,0	0/1:35,0:9:6.06:6,0,144	0/0:37,0:24:10.12:0,10,427	0/0:5,0:5:9.03:0,9,135	0/0:6,0:6:9.03:0,9,138	0/0:18,0:18:42.06:0,42,584	1/1:11,0:11:30.06:423,30,0	0/1:3,0:3:6.10:6,0,82	0/0:7,0:7:18.06:0,18,275	0/0:4,0:4:12.02:0,12,161	0/0:15,0:15:20.30:0,20,534	0/0:12,0:12:27.09:0,27,412	0/0:3,0:3:9.03:0,9,138	0/0:10,0:10:8.49:0,8,371	0/0:9,0:9:4.49:0,4,280	1/1:15,7:22:60.17:889,60,0	1/1:12,2:14:39.09:559,39,0	1/1:13,4:17:48.10:720,48,0	1/1:5,4:10:26.95:373,27,0	1/1:8,2:10:18.47:192,18,0	0/0:4,0:4:12.04:0,12,183	0/0:4,0:4:9.03:0,9,137	0/1:6,0:6:3.56:4,0,127	0/0:10,0:10:27.09:0,27,385	0/0:8,0:8:18.04:0,18,251	1/1:20,4:24:72.16:972,72,0	0/0:9,0:9:18.06:0,18,271
chr10	108349150	.	TG	T	3199.80	PASS	AB=0.571;AC=17;AF=0.304;AN=56;BaseQRankSum=17.025;DP=593;FS=13.221;HRun=3;HaplotypeScore=110.3679;InbreedingCoeff=0.9278;MQ=87.41;MQ0=0;MQRankSum=-12.511;QD=16.24;ReadPosRankSum=-0.104;VQSLOD=2.3600;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:29:39.23:433,39,0	1/1:0,3:3:8.96:72,9,0	0/0:23,0:23:69.23:0,69,1039	0/0:25,0:25:54.50:0,54,993	0/0:12,0:12:36.09:0,36,524	0/0:17,0:17:51.16:0,51,782	0/0:29,0:29:84.29:0,84,1335	1/1:8,26:34:32.90:612,33,0	0/0:15,0:15:45.12:0,45,672	0/0:31,0:31:93.32:0,93,1465	0/0:12,0:12:36.12:0,36,575	0/0:27,0:27:78.27:0,78,1244	0/0:24,0:24:72.23:0,72,1106	0/0:21,0:21:63.20:0,63,979	0/0:27,0:26:81.28:0,81,1293	0/0:28,0:28:81.25:0,81,1267	1/1:3,24:27:77.10:621,77,0	1/1:5,21:26:53.66:517,54,0	1/1:2,9:11:10.39:191,10,0	1/1:1,12:13:11.76:163,12,0	0/1:9,27:36:1.73:428,0,2	0/0:13,0:13:39.13:0,39,623	0/0:15,0:15:45.14:0,45,690	0/0:29,0:29:87.27:0,87,1353	0/0:15,0:15:42.13:0,42,647	0/0:21,0:21:60.20:0,60,934	1/1:3,15:18:35.82:366,36,0	0/0:12,0:12:36.09:0,36,528
chr10	108349152	.	CCT	C	4015.16	PASS	AB=0.571;AC=17;AF=0.304;AN=56;BaseQRankSum=17.465;DP=595;FS=10.521;HRun=0;HaplotypeScore=118.8716;InbreedingCoeff=0.9308;MQ=87.90;MQ0=0;MQRankSum=-13.137;QD=20.38;ReadPosRankSum=-0.983;VQSLOD=3.2795;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,26:32:68:588,68,0	1/1:0,3:3:9:85,9,0	0/0:23,0:23:69.07:0,69,1240	0/0:26,0:26:58.50:0,58,1145	0/0:10,0:10:30.10:0,30,580	0/0:17,0:17:51.16:0,51,952	0/0:30,0:30:90.31:0,90,1706	1/1:7,26:33:9.07:657,9,0	0/0:15,0:15:45.15:0,45,869	0/0:33,0:33:99:0,99,1869	0/0:12,0:12:36.12:0,36,695	0/0:27,0:27:81.28:0,81,1563	0/0:25,0:25:75.24:0,75,1397	0/0:20,0:20:60.20:0,60,1135	0/0:28,0:27:84.29:0,84,1610	0/0:28,0:28:78.74:0,79,1495	1/1:1,24:25:65.94:628,66,0	1/1:4,21:25:54.99:612,55,0	1/1:3,9:12:14.57:264,15,0	1/1:1,12:13:26.65:219,27,0	0/1:9,27:36:1.12:531,0,1	0/0:14,0:14:42.14:0,42,791	0/0:15,0:15:42.14:0,42,811	0/0:29,0:29:87.30:0,87,1676	0/0:14,0:14:39.13:0,39,750	0/0:20,0:20:60.21:0,60,1158	1/1:3,15:18:35.58:431,36,0	0/0:12,0:12:36.12:0,36,695
chr10	108350282	.	CCCTGGAAGCCT	C	446.72	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.593;DP=697;FS=0.000;HRun=0;HaplotypeScore=223.5416;InbreedingCoeff=0.8895;MQ=80.57;MQ0=0;MQRankSum=-3.843;QD=63.82;ReadPosRankSum=1.770;VQSLOD=3.3662;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,5339	1/1:1,6:7:15.05:535,15,0	0/0:17,0:17:48.16:0,48,2056	0/0:19,0:19:52.95:0,53,2451	0/0:18,0:18:51.16:0,51,2397	0/0:15,0:15:42.14:0,42,2183	0/0:43,0:43:99:0,126,6853	0/0:22,0:22:63.22:0,63,3471	0/0:25,0:25:66.23:0,66,3482	0/0:31,0:31:87.29:0,87,4571	0/0:15,0:15:45.15:0,45,2502	0/0:29,0:29:87.30:0,87,4744	0/0:29,0:29:87.24:0,87,4523	0/0:26,0:26:78.27:0,78,4313	0/0:27,0:27:72.25:0,72,4006	0/0:20,0:20:60.21:0,60,3442	0/0:37,0:37:99:0,111,6037	0/0:35,0:35:96.33:0,96,5061	0/0:23,0:23:63.22:0,63,3448	0/0:25,0:25:69.22:0,69,3608	0/0:64,0:64:99:0,187,10217	0/0:17,0:17:48.16:0,48,2696	0/0:15,0:15:42.12:0,42,1736	0/0:37,0:37:99:0,111,6148	0/0:19,0:19:54.19:0,54,2792	0/0:21,0:21:60.21:0,60,3186	0/0:20,0:20:60.21:0,60,3455	0/0:2,0:2:6.02:0,6,346
chr10	108352564	.	GC	G	145.97	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.298;DP=600;FS=3.135;HRun=5;HaplotypeScore=62.9846;InbreedingCoeff=0.9932;MQ=81.03;MQ0=0;MQRankSum=-1.300;QD=16.22;ReadPosRankSum=0.523;VQSLOD=3.2051;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.30:0,90,1227	1/1:0,9:9:21.06:238,21,0	0/0:22,0:22:57.96:0,58,677	0/0:22,0:22:42.70:0,43,531	0/0:16,0:16:42.11:0,42,541	0/0:19,0:19:54.17:0,54,722	0/0:24,0:24:66.22:0,66,901	0/0:21,0:21:57.19:0,57,779	0/0:24,0:24:66.22:0,66,903	0/0:16,0:16:45.15:0,45,616	0/0:8,0:8:24.08:0,24,328	0/0:24,0:24:72.23:0,72,968	0/0:27,0:27:69.20:0,69,924	0/0:32,0:32:87.29:0,87,1183	0/0:22,0:22:63.21:0,63,861	0/0:22,0:22:60.20:0,60,820	0/0:25,0:25:75.25:0,75,1025	0/0:33,0:33:96.28:0,96,1292	0/0:19,0:19:57.16:0,57,747	0/0:12,0:12:33.10:0,33,433	0/0:35,0:35:99:0,102,1346	0/0:18,0:18:48.16:0,48,655	0/0:12,0:12:36.12:0,36,485	0/0:39,0:39:99:0,108,1475	0/0:17,0:17:48.15:0,48,640	0/0:22,0:22:63.18:0,63,818	0/0:18,0:17:51.16:0,51,677	0/0:11,0:11:33.09:0,33,433
chr10	108353003	.	TAGTATAATCTCTCCATCC	T	1045.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.827;DP=758;FS=3.217;HRun=0;HaplotypeScore=348.4567;InbreedingCoeff=0.9979;MQ=88.49;MQ0=0;MQRankSum=-4.822;QD=87.15;ReadPosRankSum=0.386;VQSLOD=2.7648;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,11661	1/1:1,11:12:24.08:1139,24,0	0/0:31,0:31:87.30:0,87,5865	0/0:23,0:23:69.24:0,69,4700	0/0:21,0:21:57.20:0,57,4541	0/0:18,0:18:54.16:0,54,4170	0/0:34,0:33:96.30:0,96,7443	0/0:31,0:31:87.29:0,87,5934	0/0:35,0:35:96.30:0,96,7321	0/0:24,0:24:66.23:0,66,5575	0/0:19,0:19:57.20:0,57,4273	0/0:38,0:38:99:0,111,8422	0/0:33,0:33:99:0,99,7958	0/0:17,0:17:48.16:0,48,3699	0/0:21,0:21:60.21:0,60,4791	0/0:28,0:28:84.29:0,84,6867	0/0:51,0:51:99:0,141,11381	0/0:24,0:24:72.25:0,72,5479	0/0:26,0:26:75.24:0,75,4641	0/0:23,0:23:66.23:0,66,5018	0/0:46,0:46:99:0,138,11153	0/0:21,0:21:60.19:0,60,4548	0/0:15,0:15:45.14:0,45,3623	0/0:30,0:30:90.31:0,90,7535	0/0:26,0:26:75.25:0,75,5788	0/0:24,0:24:72.25:0,72,5798	0/0:26,0:26:78.27:0,78,6532	0/0:14,0:14:42.14:0,42,3543
chr10	108353764	.	CCG	C	4503.15	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.013;DP=696;FS=6.563;HRun=0;HaplotypeScore=87.0053;InbreedingCoeff=0.9987;MQ=90.18;MQ0=0;MQRankSum=-2.891;QD=44.15;ReadPosRankSum=5.279;VQSLOD=6.3106;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,44:45:99:1930,127,0	0/0:12,0:12:33.11:0,33,636	0/0:28,0:28:78.27:0,78,1464	0/0:29,0:29:78.02:0,78,1403	0/0:23,0:23:63.22:0,63,1188	0/0:18,0:18:54.19:0,54,1041	0/0:33,0:33:96.33:0,96,1836	0/0:35,0:35:93.31:0,93,1693	0/0:24,0:24:69.24:0,69,1323	0/0:27,0:27:72.24:0,72,1345	0/0:13,0:13:33.11:0,33,637	0/0:33,0:33:99:0,99,1907	0/0:24,0:24:69.24:0,69,1326	0/0:23,0:23:60.20:0,60,1128	0/0:27,0:27:81.26:0,81,1528	0/0:20,0:20:57.18:0,57,1054	1/1:0,23:23:69.23:1057,69,0	1/1:0,34:34:99:1516,99,0	0/0:18,0:18:51.17:0,51,982	0/0:13,0:13:27.09:0,27,521	0/0:42,0:42:99:0,123,2325	0/0:19,0:19:57.20:0,57,1085	0/0:10,0:10:24.08:0,24,463	0/0:36,0:36:99:0,108,2080	0/0:15,0:15:42.14:0,42,802	0/0:27,0:27:81.28:0,81,1546	0/0:32,0:32:93.32:0,93,1780	0/0:13,0:13:39.10:0,39,715
chr10	108354855	.	CT	C	4187.98	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.460;DP=666;FS=1.254;HRun=1;HaplotypeScore=70.3389;InbreedingCoeff=0.9992;MQ=81.80;MQ0=2;MQRankSum=-2.302;QD=32.98;ReadPosRankSum=-1.178;VQSLOD=3.0716;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,1907	0/0:17,0:17:51.17:0,51,746	0/0:24,0:24:62.35:0,62,863	0/0:17,1:17:35.13:0,35,491	0/0:16,0:16:48.16:0,48,702	0/0:21,0:21:63.20:0,63,903	0/0:30,0:30:90.21:0,90,1185	1/1:1,20:20:55.91:734,56,0	0/0:27,0:27:78.24:0,78,1119	0/0:27,0:27:75.18:0,75,1000	0/0:12,0:12:36.10:0,36,507	0/0:20,0:20:60.19:0,60,858	0/0:31,0:31:93.30:0,93,1330	0/0:21,0:21:63.18:0,63,881	0/0:31,0:31:85.86:0,86,1244	0/0:26,0:26:77.96:0,78,1053	0/0:18,0:18:54.18:0,54,790	0/0:21,0:21:63.16:0,63,874	1/1:0,16:15:39.08:486,39,0	1/1:0,12:12:27.09:375,27,0	1/1:0,47:47:99:1716,123,0	0/0:23,0:23:69.22:0,69,972	0/0:18,0:18:51.10:0,51,702	0/0:29,0:29:84.18:0,84,1146	0/0:24,0:24:69.23:0,69,1009	0/0:28,0:28:84.21:0,84,1155	1/1:0,31:31:63.21:877,63,0	0/0:8,0:8:24.08:0,24,350
chr10	108355543	.	GTC	G	5180.33	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.922;DP=694;FS=13.632;HRun=0;HaplotypeScore=84.9802;InbreedingCoeff=0.9979;MQ=71.07;MQ0=1;MQRankSum=-2.240;QD=35.24;ReadPosRankSum=-1.092;VQSLOD=5.6155;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,2373	0/0:7,0:7:18.06:0,18,330	0/0:13,0:13:39.13:0,39,701	0/0:12,0:12:30.10:0,30,540	0/0:26,0:26:72.25:0,72,1289	0/0:15,0:15:45.14:0,45,794	0/0:31,0:31:78.27:0,78,1424	1/1:3,31:34:84.26:1182,84,0	0/0:18,0:18:51.16:0,51,895	0/0:23,0:23:66.23:0,66,1207	0/0:14,0:14:39.13:0,39,712	0/0:33,0:33:99:0,99,1754	0/0:22,0:22:63.19:0,63,1122	0/0:23,0:23:66.23:0,66,1210	0/0:32,0:32:96.32:0,96,1722	0/0:27,0:27:81.28:0,81,1476	0/0:39,0:39:99:0,117,2145	0/0:17,0:17:51.17:0,51,924	1/1:2,22:23:66.18:906,66,0	1/1:1,28:29:75.25:1073,75,0	1/1:4,39:43:99:1419,99,0	0/0:26,0:26:72.25:0,72,1317	0/0:28,0:28:75.24:0,75,1305	0/0:38,0:38:99:0,105,1925	0/0:21,0:21:63.20:0,63,1125	0/0:26,0:26:78.26:0,78,1401	1/1:1,16:17:41.94:601,42,0	0/0:11,0:11:33.11:0,33,604
chr10	108357996	.	T	TAA	5869.24	PASS	AB=0.667;AC=17;AF=0.304;AN=56;BaseQRankSum=-7.404;DP=567;FS=0.000;HRun=11;HaplotypeScore=71.6401;InbreedingCoeff=0.9122;MQ=68.37;MQ0=0;MQRankSum=-2.589;QD=27.43;ReadPosRankSum=-1.188;VQSLOD=4.6595;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,21:31:60.15:806,60,0	0/1:3,0:6:16.24:21,0,16	0/0:16,0:15:26.62:0,27,228	0/0:19,0:18:21.37:0,21,245	0/0:12,0:12:30:0,30,279	0/0:17,0:22:32.52:0,33,389	0/0:26,0:26:63.05:0,63,592	1/1:4,16:22:57.01:749,57,0	0/0:29,0:29:84.05:0,84,799	0/0:17,0:17:39.02:0,39,378	0/0:8,0:8:15:0,15,145	0/0:31,0:31:53.52:0,54,671	0/0:20,0:20:44.96:0,45,417	0/0:23,0:23:60.07:0,60,582	0/0:15,0:15:42.06:0,42,407	0/0:17,0:17:51.08:0,51,495	1/1:4,28:33:72.24:1028,72,0	1/1:5,22:30:56.67:795,57,0	1/1:9,13:24:50.60:655,51,0	1/1:4,13:17:39:488,39,0	1/1:6,23:32:65.19:884,65,0	0/0:10,0:10:24.04:0,24,233	0/0:13,0:14:17.06:0,17,222	0/0:32,0:33:84.06:0,84,864	0/0:12,0:13:26.76:0,27,244	0/0:15,0:15:33.01:0,33,314	1/1:3,15:19:32.60:443,33,0	0/0:10,0:11:23.72:0,24,215
chr10	108359983	.	CAGAGAGAG	C	5096.55	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=9.071;DP=834;FS=0.428;HRun=0;HaplotypeScore=204.3114;InbreedingCoeff=0.9706;MQ=64.36;MQ0=21;MQRankSum=-5.427;QD=27.55;ReadPosRankSum=-1.346;VQSLOD=3.7611;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,7:35:28.88:568,29,0	1/1:2,6:8:6.02:143,6,0	0/0:51,0:21:10.36:0,10,226	0/0:71,0:21:38.53:0,39,473	0/0:22,0:22:48.64:0,49,1896	0/0:23,0:24:57.12:0,57,1864	0/0:22,0:24:54.14:0,54,1557	1/1:15,19:34:57.16:1161,57,0	0/0:34,0:36:93.27:0,93,3118	0/0:42,0:42:96.29:0,96,3115	0/0:17,0:16:36.12:0,36,1307	0/0:34,0:36:96.30:0,96,3321	0/0:24,0:24:54.17:0,54,1858	0/0:30,0:32:78.21:0,78,2662	0/0:41,0:44:99:0,120,4078	0/0:33,0:33:65.11:0,65,2280	1/1:15,3:23:16.47:639,16,0	1/1:10,3:19:41.97:838,42,0	1/1:8,15:23:24.05:693,24,0	1/1:2,18:20:21.07:512,21,0	./.	0/0:34,0:34:63.11:0,63,2273	0/0:16,0:18:33.08:0,33,1034	0/0:40,0:42:99:0,102,3718	0/0:17,0:21:48.14:0,48,1572	0/0:36,0:37:87.28:0,87,2943	1/1:4,16:19:21.04:543,21,0	0/0:13,0:13:33.08:0,33,1032
chr10	108360110	.	GAGGAGGAAGAGA	G	537.32	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.850;DP=728;FS=11.377;HRun=0;HaplotypeScore=216.2029;InbreedingCoeff=0.8898;MQ=59.00;MQ0=8;MQRankSum=-3.961;QD=67.16;ReadPosRankSum=-0.144;VQSLOD=2.3589;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:45.07:0,45,959	1/1:0,8:8:18.06:628,18,0	0/0:42,0:16:35.10:0,35,1309	0/0:67,0:30:48.79:0,49,1209	0/0:20,0:20:51.14:0,51,2382	0/0:20,0:20:60.21:0,60,3176	0/0:28,0:28:58.43:0,58,3064	0/0:43,0:42:62.41:0,62,3337	0/0:31,0:30:80.75:0,81,4179	0/0:34,0:31:84.26:0,84,3938	0/0:10,0:10:30.08:0,30,1156	0/0:21,0:21:51.16:0,51,2433	0/0:16,0:16:45.15:0,45,2249	0/0:33,0:32:90.63:0,91,3834	0/0:33,0:33:87.30:0,87,4340	0/0:24,0:24:60.17:0,60,3022	0/0:19,0:19:32.81:0,33,624	0/0:16,0:15:17.98:0,18,346	0/0:19,0:19:57.17:0,57,2292	0/0:16,0:16:48.15:0,48,2515	0/0:40,0:39:99:0,111,4817	0/0:28,0:28:78.23:0,78,3675	0/0:17,0:17:51.14:0,51,2287	0/0:35,0:35:99:0,99,4825	0/0:15,0:14:39.13:0,39,2017	0/0:30,0:29:78.25:0,78,3871	0/0:18,0:18:54.19:0,54,2852	0/0:3,0:3:6.02:0,6,292
chr10	108360133	.	GGGAGGAA	G	1378.82	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=6.929;DP=688;FS=19.772;HRun=0;HaplotypeScore=140.8408;InbreedingCoeff=0.8084;MQ=57.55;MQ0=11;MQRankSum=-7.164;QD=20.89;ReadPosRankSum=1.300;VQSLOD=2.0869;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:27.09:704,27,0	0/1:9,0:9:7.58:8,0,180	0/0:45,0:18:46.59:0,47,837	0/0:53,0:28:17.82:0,18,1241	0/0:23,0:23:60.21:0,60,2061	0/0:21,0:21:63.20:0,63,2197	0/0:23,0:23:66.23:0,66,2404	0/0:31,0:29:81.26:0,81,2456	0/0:34,0:32:96.27:0,96,3310	0/0:32,0:29:81.27:0,81,2867	0/0:14,0:14:42.14:0,42,1606	0/0:19,0:19:48.16:0,48,1801	0/0:16,0:16:48.16:0,48,1871	0/0:28,0:27:75.25:0,75,2758	0/0:29,0:29:87.30:0,87,3190	0/0:23,0:23:60.21:0,60,2266	1/1:1,13:14:24.08:645,24,0	1/1:1,14:14:6.02:161,6,0	0/0:25,0:23:69.24:0,69,2260	0/0:17,0:17:51.18:0,51,1975	0/0:45,0:44:99:0,123,4429	0/0:27,0:27:81.28:0,81,2928	0/0:17,0:15:39.13:0,39,1457	0/0:32,0:32:93.32:0,93,3374	0/0:12,0:11:33.10:0,33,1153	0/0:31,0:30:87.30:0,87,3501	0/0:18,0:18:54.14:0,54,1865	0/0:5,0:4:12.02:0,12,349
chr10	108360257	.	CT	C	2292.70	PASS	AB=1.000;AC=19;AF=0.352;AN=54;BaseQRankSum=3.483;DP=457;FS=0.469;HRun=8;HaplotypeScore=59.5138;InbreedingCoeff=0.9169;MQ=46.08;MQ0=12;MQRankSum=-2.748;QD=13.49;ReadPosRankSum=1.435;VQSLOD=3.1169;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,13:22:33:308,33,0	1/1:3,3:6:8.95:76,9,0	./.	0/1:10,0:5:6.08:20,0,6	0/0:18,0:18:24.02:0,24,258	0/0:15,0:15:33.08:0,33,382	0/0:25,0:24:53.71:0,54,581	1/1:9,23:31:63.05:608,63,0	0/0:15,0:15:30.03:0,30,323	0/0:13,0:13:24.02:0,24,262	0/0:13,0:13:15.05:0,15,181	0/0:15,0:15:27.01:0,27,279	0/0:8,0:8:18.05:0,18,212	0/0:14,0:14:27.05:0,27,295	0/0:18,0:18:33.57:0,34,400	0/0:18,0:18:38.98:0,39,445	1/1:11,12:23:44.88:417,45,0	1/1:2,11:13:21.03:203,21,0	1/1:8,8:15:24.03:231,24,0	1/1:6,11:17:20.83:201,21,0	1/1:9,9:17:28.16:264,28,0	0/0:16,0:16:24.06:0,24,271	0/0:19,0:19:33.04:0,33,360	0/0:26,0:26:51.07:0,51,583	0/0:12,0:12:24.07:0,24,285	0/0:20,1:21:19.19:0,19,473	1/1:3,8:10:18.02:174,18,0	0/0:16,0:15:33.06:0,33,372
chr10	108360492	.	AT	A	1915.01	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.747;DP=518;FS=0.000;HRun=11;HaplotypeScore=56.5402;InbreedingCoeff=0.9391;MQ=74.00;MQ0=0;MQRankSum=0.502;QD=18.77;ReadPosRankSum=-0.206;VQSLOD=4.4222;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,1030	0/0:5,0:5:15.04:0,15,160	0/0:17,0:17:32:0,32,294	0/0:14,0:14:22.71:0,23,230	0/0:21,1:22:32.48:0,32,537	0/0:25,0:25:55.23:0,55,640	0/0:30,1:31:75.27:0,75,855	1/1:3,21:24:59.86:485,60,0	0/0:14,0:14:36.09:0,36,384	0/0:18,0:18:45.10:0,45,469	0/0:12,1:13:11.45:0,11,321	0/0:18,0:18:48.06:0,48,485	0/0:12,2:14:11.44:0,11,321	0/0:13,1:14:14.44:0,14,348	0/0:17,0:17:41.97:0,42,419	0/0:23,0:23:60.13:0,60,626	0/0:16,0:17:34.96:0,35,442	0/0:12,0:12:32.84:0,33,321	1/1:1,21:23:64.88:507,65,0	1/1:1,11:12:3.98:239,4,0	1/1:1,19:20:50.94:419,51,0	0/0:11,0:11:33.08:0,33,346	0/0:13,0:13:36.08:0,36,376	0/0:24,0:24:69.94:0,70,713	0/0:9,0:9:27.05:0,27,275	0/0:34,0:34:83.78:0,84,860	1/1:2,21:23:27.93:433,28,0	0/0:14,0:15:41.92:0,42,421
chr10	108361204	.	T	TAC	135.70	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=5.684;DP=1112;FS=13.084;HRun=0;HaplotypeScore=184.8853;InbreedingCoeff=0.9529;MQ=51.23;MQ0=71;MQRankSum=-4.063;QD=7.14;ReadPosRankSum=-0.574;VQSLOD=2.4309;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:63,1:56:99:0,106,1241	1/1:7,11:19:14.49:223,14,0	./.	./.	0/0:27,0:26:57.18:0,57,712	0/0:21,0:21:45.13:0,45,548	0/0:47,0:45:78.14:0,78,905	0/0:68,0:57:77.15:0,77,1125	0/0:43,0:43:92.79:0,93,1064	0/0:36,0:33:71.97:0,72,862	0/0:24,0:23:53.65:0,54,640	0/0:53,0:52:99:0,123,1461	0/0:30,0:30:61.22:0,61,831	0/0:45,0:45:99:0,99,1215	0/0:45,0:45:99:0,111,1326	0/0:33,0:33:75.04:0,75,889	0/0:45,0:45:61.05:0,61,1150	0/0:37,1:39:18.45:0,18,778	0/0:15,0:11:24.01:0,24,266	0/0:26,0:25:40.35:0,40,637	0/0:133,0:118:99:0,167,1918	0/0:27,0:27:62.21:0,62,728	0/0:20,0:20:46.18:0,46,545	0/0:57,0:56:99:0,106,1242	0/0:19,0:19:38.84:0,39,448	0/0:47,0:40:93.14:0,93,1103	0/0:24,0:24:17.54:0,18,614	0/0:16,0:15:16.54:0,17,430
chr10	108361267	.	C	CCA	2732.73	PASS	AB=0.859;AC=7;AF=0.135;AN=52;BaseQRankSum=-2.261;DP=1019;FS=61.657;HRun=0;HaplotypeScore=178.2407;InbreedingCoeff=0.2197;MQ=50.92;MQ0=69;MQRankSum=-0.819;QD=11.53;ReadPosRankSum=0.243;VQSLOD=1.0417;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:46:34.38:0,34,390	0/1:13,0:13:2.13:2,0,160	./.	./.	0/0:16,0:15:20.42:0,20,223	0/0:27,0:27:66.45:0,66,740	0/0:45,0:44:86.48:0,86,1015	0/1:45,5:38:71.87:538,0,72	0/0:49,0:50:99:0,115,1333	0/0:47,0:40:70.86:0,71,793	0/0:20,0:19:28.86:0,29,313	0/0:48,0:47:99:0,109,1272	0/0:34,0:32:83.95:0,84,961	0/0:38,0:38:64.51:0,65,881	0/0:43,0:43:98.57:0,99,1101	0/0:30,0:31:60.81:0,61,741	0/0:34,0:35:63:0,63,487	0/0:27,0:29:46.87:0,47,311	0/1:15,2:13:12.32:136,0,12	1/1:17,10:26:49.95:688,50,0	0/1:78,23:87:19.22:858,0,19	0/0:24,0:23:42.12:0,42,500	0/0:20,0:18:22.89:0,23,369	0/0:57,0:55:99:0,109,1254	0/0:20,0:20:48.13:0,48,565	0/0:32,0:29:63.11:0,63,645	0/1:15,11:26:17.76:640,0,18	0/0:7,0:8:14.85:0,15,144
chr10	108361321	.	T	TAC	9839.60	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=0.057;DP=1083;FS=0.621;HRun=0;HaplotypeScore=154.9663;InbreedingCoeff=0.9832;MQ=55.29;MQ0=21;MQRankSum=-2.047;QD=24.97;ReadPosRankSum=-0.014;VQSLOD=5.5582;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,44:64:90.92:1544,91,0	1/1:2,1:3:6:60,6,0	0/0:60,0:21:38.77:0,39,433	0/0:68,1:17:50.91:0,51,587	0/0:21,0:21:57.18:0,57,746	0/0:22,0:22:60.19:0,60,770	0/0:39,0:39:93.01:0,93,1149	1/1:15,33:40:93.24:1484,93,0	0/0:43,0:43:99:0,108,1355	0/0:35,0:34:79.96:0,80,1012	0/0:22,0:20:54.13:0,54,683	0/0:60,0:61:99:0,134,2019	0/0:37,0:36:96.29:0,96,1216	0/0:47,0:47:99:0,129,1666	0/0:43,0:43:99:0,110,1351	0/0:33,0:33:89.32:0,89,1148	1/1:10,30:40:43.97:890,44,0	1/1:4,22:27:48.64:934,49,0	1/1:7,11:17:33.08:489,33,0	1/1:9,30:40:75.24:1254,75,0	1/1:32,86:110:99:2161,129,0	0/0:30,0:30:81.21:0,81,1022	0/0:17,0:17:45.14:0,45,582	0/0:46,0:46:99:0,109,1412	0/0:21,0:21:45.13:0,45,586	0/0:31,0:31:81.26:0,81,1062	1/1:4,25:29:63.20:1023,63,0	0/0:12,0:11:27.06:0,27,338
chr10	108365452	.	T	TC	178.97	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.998;DP=531;FS=5.090;HRun=1;HaplotypeScore=65.6148;InbreedingCoeff=0.9459;MQ=66.88;MQ0=15;MQRankSum=-0.413;QD=22.37;ReadPosRankSum=0.358;VQSLOD=3.5530;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:75.84:0,76,883	1/1:0,8:8:20.98:271,21,0	0/0:27,0:10:24:0,24,275	0/0:38,0:15:11.94:0,12,189	0/0:19,0:19:50.93:0,51,554	0/0:13,0:13:33.10:0,33,414	0/0:21,0:21:63.09:0,63,737	0/0:17,0:16:44.71:0,45,462	0/0:16,0:16:42.08:0,42,485	0/0:11,0:10:27.05:0,27,292	0/0:16,0:16:39.07:0,39,439	0/0:26,0:26:60.15:0,60,733	0/0:18,0:18:42.09:0,42,494	0/0:19,0:18:51.10:0,51,591	0/0:17,0:16:38.63:0,39,514	0/0:16,0:16:42.06:0,42,506	0/0:26,0:26:72.22:0,72,911	0/0:23,0:23:66.12:0,66,809	0/0:9,0:9:26.11:0,26,301	0/0:15,0:15:41.75:0,42,372	0/0:15,0:15:36.12:0,36,465	0/0:7,0:7:18.06:0,18,228	0/0:20,0:20:60.13:0,60,714	0/0:26,0:26:78.10:0,78,935	0/0:21,0:21:54.16:0,54,673	0/0:32,0:29:72.17:0,72,854	0/0:14,0:13:32.94:0,33,396	0/0:7,0:7:18.06:0,18,232
chr10	108366186	.	AG	A	9133.87	PASS	AB=0.833;AC=55;AF=0.982;AN=56;BaseQRankSum=0.055;DP=406;FS=0.000;HRun=1;HaplotypeScore=303.5439;InbreedingCoeff=-0.0310;MQ=52.24;MQ0=0;MQRankSum=-1.454;QD=22.50;ReadPosRankSum=4.098;VQSLOD=3.9645;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,23:28:61.58:542,62,0	1/1:2,2:4:6.01:62,6,0	1/1:6,1:7:2:63,2,0	0/1:3,1:4:18.99:30,0,19	1/1:0,16:16:42.03:419,42,0	1/1:1,12:13:38.99:355,39,0	1/1:2,25:27:51.99:545,52,0	1/1:5,14:19:23.58:444,24,0	1/1:0,17:17:50.91:436,51,0	1/1:1,12:13:23.48:304,23,0	1/1:1,5:6:12:104,12,0	1/1:2,19:21:39.79:480,40,0	1/1:3,15:19:55.38:476,55,0	1/1:0,14:14:38.86:360,39,0	1/1:0,13:13:37.64:302,38,0	1/1:0,20:20:60.02:557,60,0	1/1:1,16:17:45.02:419,45,0	1/1:0,9:9:24.04:240,24,0	1/1:1,15:16:44.98:454,45,0	1/1:1,12:13:30.34:270,30,0	1/1:4,13:17:35.93:372,36,0	1/1:0,9:9:21.05:234,21,0	1/1:1,12:13:19.78:174,20,0	1/1:3,14:17:17.97:164,18,0	1/1:3,6:9:23.93:218,24,0	1/1:2,22:24:40.56:571,41,0	1/1:0,16:16:37.56:424,38,0	1/1:0,4:4:12.02:116,12,0
chr10	108366187	.	GAA	G	14158.01	PASS	AB=0.850;AC=54;AF=0.964;AN=56;BaseQRankSum=2.190;DP=409;FS=8.724;HRun=3;HaplotypeScore=293.4929;InbreedingCoeff=-0.0441;MQ=52.24;MQ0=0;MQRankSum=-3.375;QD=34.62;ReadPosRankSum=2.348;VQSLOD=2.9842;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:63.17:881,63,0	1/1:2,2:4:6.02:91,6,0	0/1:4,1:7:37.13:72,0,37	0/1:5,0:4:27.75:55,0,28	1/1:16,0:16:40.67:556,41,0	1/1:13,0:13:39.13:572,39,0	1/1:27,0:27:63.17:874,63,0	1/1:19,0:19:48.16:718,48,0	1/1:19,0:19:52.71:736,53,0	1/1:13,0:13:36.10:501,36,0	1/1:6,0:6:12.04:182,12,0	1/1:21,0:21:51.17:768,51,0	1/1:18,1:19:54.16:769,54,0	1/1:15,0:15:42.12:576,42,0	1/1:13,0:12:38.62:531,39,0	1/1:20,0:20:60.20:903,60,0	1/1:17,0:17:45.15:670,45,0	1/1:9,0:9:24.08:364,24,0	1/1:16,0:16:45.12:631,45,0	1/1:13,0:13:30.04:400,30,0	1/1:17,0:17:36.09:456,36,0	1/1:9,0:9:20.92:249,21,0	1/1:13,0:13:17.99:259,18,0	1/1:17,0:17:18.03:226,18,0	1/1:9,0:9:24.06:314,24,0	1/1:24,0:24:66.13:929,66,0	1/1:16,0:16:48.12:693,48,0	1/1:4,0:4:12.04:182,12,0
chr10	108368979	.	TCACACACACACA	T	247.56	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=3.196;DP=587;FS=0.000;HRun=0;HaplotypeScore=172.6517;InbreedingCoeff=0.6730;MQ=55.75;MQ0=19;MQRankSum=-2.832;QD=2.61;ReadPosRankSum=-0.387;VQSLOD=2.3175;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,17:42:5.50:136,5,0	0/0:5,0:11:24.08:0,24,958	0/0:40,0:11:3.01:0,3,42	0/0:35,0:10:3.01:0,3,39	0/0:14,0:14:24.08:0,24,1133	0/0:20,0:24:22.26:0,22,1347	0/0:27,0:31:48.14:0,48,1597	0/0:20,0:19:17.88:0,18,255	0/0:15,0:21:36.12:0,36,1434	0/0:20,0:20:24.08:0,24,1037	0/0:9,0:9:12.04:0,12,510	0/0:14,0:17:28.04:0,28,1225	0/0:12,0:13:24.07:0,24,960	0/0:14,0:16:33.42:0,33,1609	0/0:18,0:18:30.10:0,30,1469	0/0:19,0:19:24.97:0,25,1105	1/1:19,9:28:3.01:43,3,0	1/1:10,8:18:6.02:181,6,0	0/0:8,0:11:12.04:0,12,510	0/1:7,0:7:0:0,0,0	0/0:27,0:38:15.05:0,15,706	0/0:14,0:18:30.10:0,30,1196	0/0:15,0:15:24.08:0,24,1084	0/0:34,0:38:72.25:0,72,3536	0/0:14,0:14:27.09:0,27,1130	0/0:21,0:24:63.21:0,63,2035	0/0:10,0:16:18.05:0,18,638	0/0:6,0:7:11.99:0,12,304
chr10	108369668	.	T	TTGTGTGTGTGTGTG	6604.93	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=1.034;DP=693;FS=2.539;HRun=0;HaplotypeScore=258.2751;InbreedingCoeff=0.7964;MQ=62.01;MQ0=2;MQRankSum=-8.935;QD=26.85;ReadPosRankSum=-3.655;VQSLOD=3.5774;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,12:33:11.84:770,12,0	1/1:7,0:7:2.97:20,3,0	0/0:31,0:22:7.57:0,8,156	0/1:21,0:14:5.77:6,0,135	0/0:17,0:19:42.13:0,42,1505	0/0:19,0:20:36.09:0,36,1281	0/0:32,0:35:78.27:0,78,2624	1/1:24,0:22:27:811,27,0	0/0:20,0:21:45.15:0,45,1697	0/0:33,0:34:62.86:0,63,1919	0/0:12,0:13:33.09:0,33,1185	0/0:25,0:26:57.19:0,57,1808	0/0:34,0:34:72.19:0,72,2465	0/0:15,0:17:39.13:0,39,1415	0/0:26,0:27:51.13:0,51,1697	0/0:14,0:14:24.08:0,24,933	1/1:19,9:28:23.75:1437,24,0	1/1:11,12:23:18.06:1094,18,0	1/1:11,0:10:20.98:616,21,0	1/1:24,0:24:6.18:43,6,0	1/1:35,0:33:20.94:294,21,0	0/0:33,0:33:63.17:0,63,2061	0/0:24,0:24:39.13:0,39,1447	0/0:41,0:41:66.24:0,66,3277	0/0:27,0:27:33.58:0,34,1302	0/0:30,0:30:60.18:0,60,2035	1/1:10,0:24:24.08:1444,24,0	0/1:15,0:15:70.85:71,0,935
chr10	108372451	.	GT	G	249.66	PASS	AB=1.000;AC=22;AF=0.786;AN=28;BaseQRankSum=-2.282;DP=36;FS=3.358;HRun=1;HaplotypeScore=11.8386;InbreedingCoeff=0.2276;MQ=111.37;MQ0=0;MQRankSum=-2.100;QD=11.89;ReadPosRankSum=-1.552;VQSLOD=1.3018;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,1:2:3.01:35,3,0	./.	0/0:4,0:3:3.01:0,3,30	0/0:5,0:4:2.24:0,2,22	./.	./.	1/1:2,0:2:2.97:20,3,0	1/1:1,0:1:2.99:23,3,0	./.	./.	./.	0/1:1,0:1:0:0,0,0	./.	1/1:3,0:3:3.01:33,3,0	1/1:1,0:1:2.99:24,3,0	1/1:2,0:2:2.99:24,3,0	./.	./.	./.	1/1:1,1:2:6.02:78,6,0	./.	1/1:0,1:1:3.01:39,3,0	./.	1/1:4,0:4:2.99:24,3,0	1/1:0,1:1:3.01:39,3,0	0/1:1,0:1:0:0,0,0	./.	./.
chr10	108372648	.	C	CAA	77.32	PASS	AC=6;AF=0.60;AN=10;BaseQRankSum=-1.380;DP=87;FS=3.979;HRun=0;HaplotypeScore=11.5535;MQ=39.01;MQ0=81;MQRankSum=-1.380;QD=5.15;ReadPosRankSum=0.720;VQSLOD=1.4927;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:7,0:1:3:0,3,25	0/0:11,0:1:2.80:0,3,13	./.	1/1:1,1:1:3.01:56,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:9,2:2:6.02:93,6,0	./.	1/1:1,1:1:0.89:2,1,0	./.	./.	./.	./.	./.
chr10	108372705	.	GTC	G	2740.08	PASS	AB=0.589;AC=44;AF=0.880;AN=50;BaseQRankSum=-1.654;DP=175;FS=0.000;HRun=0;HaplotypeScore=59.2661;InbreedingCoeff=0.2649;MQ=47.10;MQ0=14;MQRankSum=-1.800;QD=16.71;ReadPosRankSum=0.884;VQSLOD=3.1678;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:2:3.37:17,3,0	0/1:1,2:3:2.63:88,0,3	./.	0/0:3,0:3:5.81:0,6,64	1/1:3,6:7:2.65:14,3,0	1/1:1,6:7:18.15:229,18,0	1/1:1,4:5:13.22:153,13,0	0/0:2,0:2:0:0,0,0	1/1:4,2:5:0.59:92,1,0	1/1:4,5:9:13.23:145,13,0	1/1:1,3:4:2.65:14,3,0	1/1:6,12:17:40.56:461,41,0	1/1:4,7:11:17.76:135,18,0	1/1:1,6:7:1.83:17,2,0	0/1:3,8:9:1.62:86,0,2	1/1:3,8:11:25.80:352,26,0	./.	1/1:2,0:1:1.25:3,1,0	1/1:3,1:4:3.91:23,4,0	1/1:4,1:5:6.23:63,6,0	./.	1/1:2,7:8:13.08:68,13,0	1/1:5,3:8:14.55:66,15,0	1/1:2,2:3:0.47:1,0,0	1/1:0,5:5:13.60:196,14,0	1/1:1,5:6:12.93:171,13,0	1/1:1,14:15:30.80:397,31,0	1/1:0,1:1:3.01:48,3,0
chr10	108372709	.	G	GA	2186.56	PASS	AB=0.750;AC=46;AF=0.920;AN=50;BaseQRankSum=0.699;DP=171;FS=0.000;HRun=0;HaplotypeScore=60.3455;InbreedingCoeff=0.2205;MQ=43.51;MQ0=11;MQRankSum=-0.426;QD=13.41;ReadPosRankSum=0.657;VQSLOD=3.7598;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:2,1:2:0.48:42,0,0	1/1:2,1:3:8.71:75,9,0	./.	0/1:2,0:3:4.30:4,0,24	1/1:7,2:7:6.91:40,7,0	1/1:6,1:7:19.84:140,20,0	1/1:4,1:5:13.75:67,14,0	1/1:0,2:2:6.02:68,6,0	1/1:2,3:5:13.76:127,14,0	1/1:5,4:9:21.01:189,21,0	1/1:3,1:4:5.67:37,6,0	1/1:13,5:17:40.55:273,41,0	1/1:8,3:11:8.49:47,8,0	1/1:6,1:7:10.26:61,10,0	1/1:10,1:9:10.44:54,10,0	1/1:8,3:11:30.66:241,31,0	./.	1/1:1,1:1:1.55:4,2,0	1/1:1,3:4:9.87:89,10,0	1/1:1,4:5:11.71:125,12,0	./.	1/1:7,2:8:12.42:66,12,0	1/1:3,5:8:18.30:204,18,0	0/0:3,1:3:0:0,0,0	1/1:5,0:5:11.30:56,11,0	1/1:4,1:6:10.84:94,11,0	1/1:14,1:15:24.41:157,24,0	1/1:1,0:1:2.88:15,3,0
chr10	108373365	.	C	CA	222.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.305;DP=771;FS=12.880;HRun=1;HaplotypeScore=78.3332;InbreedingCoeff=0.9938;MQ=83.02;MQ0=0;MQRankSum=-4.473;QD=31.72;ReadPosRankSum=0.349;VQSLOD=2.0310;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1271	1/1:0,7:7:21.07:314,21,0	0/0:26,0:26:69.15:0,69,827	0/0:23,0:23:57.98:0,58,671	0/0:19,0:19:57.17:0,57,726	0/0:30,0:30:90.27:0,90,1153	0/0:27,0:27:75.23:0,75,959	0/0:24,0:24:69.18:0,69,866	0/0:36,0:36:99:0,105,1363	0/0:29,0:29:87.28:0,87,1129	0/0:14,0:14:39.13:0,39,506	0/0:25,0:25:72.22:0,72,921	0/0:25,0:25:72.21:0,72,917	0/0:24,0:24:69.22:0,69,896	0/0:38,0:38:99:0,114,1465	0/0:27,0:27:78.24:0,78,994	0/0:37,0:37:99:0,111,1441	0/0:52,0:52:99:0,153,1986	0/0:28,0:28:81.24:0,81,1030	0/0:14,0:14:39.13:0,39,506	0/0:61,0:61:99:0,173,2209	0/0:20,0:20:60.18:0,60,764	0/0:18,0:18:51.17:0,51,662	0/0:41,0:41:99:0,123,1597	0/0:18,0:18:51.17:0,51,662	0/0:38,0:38:99:0,114,1480	0/0:27,0:27:81.26:0,81,1052	0/0:9,0:9:24.05:0,24,294
chr10	108373382	.	AAAC	A	192.11	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.510;DP=747;FS=3.246;HRun=0;HaplotypeScore=105.6361;InbreedingCoeff=0.9855;MQ=87.34;MQ0=0;MQRankSum=-4.461;QD=27.44;ReadPosRankSum=-1.306;VQSLOD=3.0237;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,2038	1/1:0,7:7:20.99:284,21,0	0/0:28,0:28:75.21:0,75,1534	0/0:26,0:26:69.23:0,69,1475	0/0:20,0:20:57.18:0,57,1184	0/0:26,0:26:69.24:0,69,1540	0/0:28,0:28:81.25:0,81,1715	0/0:22,0:22:51.17:0,51,1128	0/0:34,0:34:99:0,99,2144	0/0:27,0:27:78.24:0,78,1616	0/0:10,0:10:18.06:0,18,400	0/0:29,0:29:84.22:0,84,1813	0/0:26,0:26:78.27:0,78,1739	0/0:22,0:22:63.22:0,63,1379	0/0:37,0:37:99:0,108,2324	0/0:27,0:27:69.23:0,69,1475	0/0:34,0:34:99:0,99,2124	0/0:45,0:45:99:0,129,2834	0/0:20,0:20:51.17:0,51,1138	0/0:14,0:14:33.10:0,33,697	0/0:67,0:67:99:0,196,4155	0/0:13,0:13:33.11:0,33,709	0/0:22,0:22:60.21:0,60,1300	0/0:42,0:42:99:0,126,2764	0/0:20,0:20:54.16:0,54,1161	0/0:33,0:33:99:0,99,2177	0/0:26,0:26:78.27:0,78,1725	0/0:8,0:8:24.07:0,24,484
chr10	108373990	.	T	TCTTC	2063.42	PASS	AB=0.678;AC=10;AF=0.192;AN=52;BaseQRankSum=-5.389;DP=571;FS=0.000;HRun=0;HaplotypeScore=91.9544;InbreedingCoeff=0.6779;MQ=61.37;MQ0=4;MQRankSum=1.750;QD=16.91;ReadPosRankSum=-0.706;VQSLOD=2.6797;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,14:32:18.90:430,0,19	1/1:6,0:6:5.90:38,6,0	./.	./.	1/1:7,12:19:29.86:510,30,0	0/0:26,0:25:32.94:0,33,415	0/0:29,0:29:27.03:0,27,314	0/0:31,0:30:11.68:0,12,73	0/0:18,0:18:30.02:0,30,336	0/0:25,0:25:33.07:0,33,392	0/0:14,0:14:11.94:0,12,147	0/0:18,0:18:36.09:0,36,496	0/0:16,0:16:30.07:0,30,403	0/0:26,0:26:51.12:0,51,703	0/0:31,0:31:60.15:0,60,826	0/0:31,0:31:63.07:0,63,787	0/1:16,17:32:6.62:535,0,7	1/1:8,14:23:24.08:564,24,0	0/0:20,0:20:24.06:0,24,331	0/0:10,0:10:15.04:0,15,211	0/0:25,0:25:42.05:0,42,503	0/0:7,0:7:12.03:0,12,163	0/0:12,0:11:6.01:0,6,72	0/0:19,0:20:33.06:0,33,427	0/0:20,0:20:30.08:0,30,405	0/0:25,0:25:42.13:0,42,606	0/0:24,0:24:36.10:0,36,515	1/1:4,3:9:6.02:141,6,0
chr10	108374233	.	TTTTC	T	1053.91	PASS	AC=10;AF=0.200;AN=50;BaseQRankSum=1.252;DP=674;FS=25.123;HRun=0;HaplotypeScore=113.6563;InbreedingCoeff=0.8182;MQ=58.27;MQ0=10;MQRankSum=1.037;QD=9.85;ReadPosRankSum=-0.342;VQSLOD=1.3085;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:30:5.97:0,6,55	0/0:5,0:5:3.01:0,3,39	./.	./.	0/0:23,0:23:36.12:0,36,751	0/0:22,0:24:18.06:0,18,316	0/0:23,0:23:18.01:0,18,334	./.	0/0:15,0:25:21.07:0,21,349	0/0:31,0:30:36.12:0,36,772	0/0:11,0:20:29.09:0,29,390	0/0:21,0:24:30.08:0,30,361	1/1:11,6:17:15.05:229,15,0	1/1:6,8:14:12.04:183,12,0	0/0:14,0:24:21.07:0,21,367	0/0:27,0:27:51.16:0,51,1140	0/0:24,0:30:21.07:0,21,303	0/0:19,0:25:15.03:0,15,201	0/0:21,0:23:22.22:0,22,213	0/0:10,0:17:16.80:0,17,139	0/0:18,0:17:5.61:0,6,42	1/1:13,6:19:18.06:262,18,0	1/1:15,5:19:5.91:81,6,0	1/1:19,18:37:30.10:457,30,0	0/0:25,0:25:16.43:0,16,746	0/0:27,0:27:36.12:0,36,719	0/0:16,0:26:16.28:0,16,210	0/0:13,0:13:3.01:0,3,55
chr10	108376384	.	CAT	C	177.91	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.672;DP=638;FS=6.523;HRun=0;HaplotypeScore=75.5245;InbreedingCoeff=0.7781;MQ=67.11;MQ0=0;MQRankSum=-0.607;QD=17.79;ReadPosRankSum=1.336;VQSLOD=3.0600;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,99,1606	1/1:3,7:10:21.07:270,21,0	0/0:8,0:6:3.01:0,3,50	0/0:11,0:9:8.21:0,8,75	0/0:25,0:25:57.19:0,57,957	0/0:17,0:17:45.14:0,45,729	0/0:25,1:25:27.61:0,28,1021	0/0:45,1:46:66.70:0,67,1647	0/0:21,0:21:60.21:0,60,1005	0/0:44,0:44:99:0,126,2074	0/0:16,0:16:42.14:0,42,704	0/0:28,0:28:69.24:0,69,1154	0/0:30,0:30:84.29:0,84,1407	0/0:22,0:22:54.18:0,54,910	0/0:21,0:20:60.21:0,60,1009	0/0:18,0:18:42.13:0,42,683	0/0:24,0:24:66.21:0,66,1079	0/0:33,0:33:96.33:0,96,1607	0/0:19,0:19:42.13:0,42,679	0/0:17,0:17:45.15:0,45,759	0/0:25,0:25:69.24:0,69,1164	0/0:27,0:27:75.24:0,75,1232	0/0:24,0:24:66.23:0,66,1109	0/0:22,0:22:63.22:0,63,1063	0/0:17,0:17:48.15:0,48,772	0/0:24,1:25:33.60:0,34,1050	0/0:19,0:19:54.17:0,54,885	0/0:4,0:4:12.04:0,12,202
chr10	108376479	.	G	GCA	4161.58	PASS	AB=0.630;AC=9;AF=0.161;AN=56;BaseQRankSum=-9.398;DP=757;FS=3.656;HRun=0;HaplotypeScore=90.9056;InbreedingCoeff=0.6357;MQ=59.53;MQ0=13;MQRankSum=0.386;QD=22.62;ReadPosRankSum=-0.493;VQSLOD=3.9321;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:81.24:0,81,977	1/1:4,0:11:18:158,18,0	0/0:39,0:17:36.36:0,36,372	0/0:49,0:18:25.99:0,26,355	0/0:15,0:17:47.79:0,48,521	0/0:18,0:18:45.14:0,45,542	0/0:26,0:26:48.62:0,49,578	0/1:22,19:42:69.90:885,0,70	0/0:21,0:21:51.14:0,51,602	0/0:32,0:31:57.16:0,57,673	0/0:15,0:16:38.95:0,39,448	0/0:18,0:19:50.99:0,51,592	0/0:25,0:27:63.02:0,63,737	0/0:20,0:20:39.09:0,39,455	0/0:29,0:31:78.02:0,78,889	0/0:14,0:15:32.93:0,33,376	0/0:45,1:49:47.43:0,47,1001	0/0:26,0:27:53.97:0,54,613	0/1:11,10:21:95.01:357,0,95	1/1:3,18:21:8.99:637,9,0	1/1:12,58:69:76.02:1676,76,0	0/0:14,0:14:30.09:0,30,361	0/0:15,0:15:39.10:0,39,457	0/0:32,0:35:69.04:0,69,807	0/0:12,0:14:32.75:0,33,343	0/0:33,0:33:72.21:0,72,857	0/1:3,13:16:3.08:448,0,3	0/0:14,0:13:39.12:0,39,470
chr10	108378445	.	A	AC	991.83	PASS	AB=0.774;AC=8;AF=0.143;AN=56;BaseQRankSum=6.938;DP=401;FS=3.516;HRun=1;HaplotypeScore=61.4110;InbreedingCoeff=0.0999;MQ=54.52;MQ0=14;MQRankSum=-4.985;QD=8.62;ReadPosRankSum=-2.962;VQSLOD=0.0021;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:41.83:0,42,545	0/1:4,7:10:99:155,0,132	0/0:18,0:6:18.05:0,18,223	0/0:11,0:7:18.04:0,18,203	0/0:21,0:21:51.15:0,51,648	0/0:18,0:17:39.13:0,39,506	0/0:20,1:21:12.37:0,12,641	0/1:16,4:15:99:105,0,240	0/0:8,0:8:21.07:0,21,273	0/0:15,0:14:39.13:0,39,503	0/0:9,0:9:24.08:0,24,312	0/0:11,0:11:30.10:0,30,389	0/0:15,0:14:42.14:0,42,545	0/0:13,0:13:36.12:0,36,467	0/0:10,0:10:30.10:0,30,389	0/0:14,0:14:42.14:0,42,545	0/0:17,0:16:39.12:0,39,497	0/0:18,0:18:6.18:0,6,541	0/1:20,6:22:99:288,0,479	0/1:2,1:3:32.86:39,0,33	1/1:4,8:10:21.03:289,21,0	0/0:6,0:6:15.05:0,15,195	0/0:14,0:14:36.09:0,36,450	0/1:21,2:22:35.73:36,0,569	0/0:10,0:9:24.08:0,24,312	0/0:13,0:12:36.12:0,36,468	0/1:12,8:18:99:221,0,340	0/0:3,0:3:9.03:0,9,117
chr10	108378942	.	G	GAGGGAGC	14999.74	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.156;DP=696;FS=0.000;HRun=0;HaplotypeScore=179.9437;InbreedingCoeff=0.9994;MQ=76.05;MQ0=0;MQRankSum=-16.359;QD=59.76;ReadPosRankSum=-4.069;VQSLOD=4.0092;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,24:46:93.30:3318,93,0	1/1:8,12:21:39.13:1499,39,0	0/0:22,0:21:51.17:0,51,1090	0/0:15,0:15:36.08:0,36,767	0/0:17,0:17:39.12:0,39,908	0/0:24,0:24:63.22:0,63,1549	0/0:33,0:33:87.28:0,87,2094	1/1:20,5:26:45.14:1435,45,0	0/0:31,0:31:78.25:0,78,1873	0/0:26,0:26:66.23:0,66,1589	0/0:11,0:11:30.10:0,30,735	0/0:31,0:31:93.31:0,93,2242	0/0:26,0:26:66.23:0,66,1593	0/0:21,0:21:57.20:0,57,1401	0/0:26,0:26:72.25:0,72,1750	0/0:31,0:31:78.27:0,78,1891	1/1:10,13:23:47.16:1637,47,0	1/1:7,5:12:24.08:815,24,0	1/1:15,7:22:48.16:1575,48,0	1/1:21,7:28:36.12:1264,36,0	1/1:25,13:38:41.93:1374,42,0	0/0:27,0:27:75.26:0,75,1847	0/0:18,0:18:42.14:0,42,1035	0/0:33,0:33:87.30:0,87,2140	0/0:18,0:18:51.18:0,51,1255	0/0:25,0:25:66.22:0,66,1580	1/1:21,11:35:63.19:2083,63,0	0/0:10,0:10:30.10:0,30,740
chr10	108378998	.	GA	G	8012.82	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.106;DP=655;FS=7.077;HRun=1;HaplotypeScore=93.8616;InbreedingCoeff=0.9970;MQ=78.60;MQ0=0;MQRankSum=-7.958;QD=37.44;ReadPosRankSum=-0.662;VQSLOD=4.5703;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:44:99:1625,120,0	0/0:13,0:13:38.95:0,39,508	0/0:19,0:19:46.57:0,47,664	0/0:15,0:15:42.12:0,42,629	0/0:16,0:16:48.16:0,48,766	0/0:22,0:22:66.22:0,66,1047	0/0:43,0:43:99:0,129,2031	1/1:0,26:26:75.16:1003,75,0	0/0:26,0:26:78.27:0,78,1242	0/0:25,0:25:75.23:0,75,1172	0/0:8,0:8:24.08:0,24,369	0/0:28,0:28:84.29:0,84,1341	0/0:23,0:23:69.24:0,69,1098	0/0:22,0:22:66.21:0,66,1028	0/0:33,0:33:99:0,99,1547	0/0:23,0:23:69.21:0,69,1057	1/1:0,25:25:72.24:998,72,0	1/1:0,13:13:39.13:541,39,0	1/1:0,23:23:69.22:941,69,0	1/1:0,16:16:42.14:576,42,0	1/1:0,45:45:99:1502,108,0	0/0:25,0:25:75.24:0,75,1175	0/0:15,0:15:42.14:0,42,671	0/0:31,0:31:90.29:0,90,1411	0/0:25,0:25:75.23:0,75,1168	0/0:24,0:24:72.25:0,72,1149	1/1:0,22:22:60.20:827,60,0	0/0:5,0:5:15.05:0,15,240
chr10	108379274	.	A	AG	398.63	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.977;DP=662;FS=5.414;HRun=1;HaplotypeScore=63.2749;InbreedingCoeff=0.9409;MQ=78.55;MQ0=0;MQRankSum=-0.955;QD=33.22;ReadPosRankSum=-0.502;VQSLOD=2.9235;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,141,1829	1/1:0,12:12:33.11:493,33,0	0/0:16,0:16:23.52:0,24,484	0/0:14,0:14:23.94:0,24,391	0/0:18,0:18:51.17:0,51,662	0/0:19,0:19:54.18:0,54,701	0/0:34,0:34:99:0,102,1291	0/0:24,0:24:72.23:0,72,934	0/0:23,0:23:66.20:0,66,842	0/0:29,0:29:87.28:0,87,1129	0/0:12,0:12:36.12:0,36,467	0/0:41,0:41:99:0,120,1545	0/0:24,0:24:72.22:0,72,920	0/0:22,0:22:65.58:0,66,825	0/0:26,0:26:69.20:0,69,869	0/0:20,0:20:60.19:0,60,767	0/0:32,0:32:93.29:0,93,1191	0/0:17,0:17:51.11:0,51,628	0/0:18,0:18:51.17:0,51,661	0/0:17,0:17:45.15:0,45,583	0/0:66,0:66:99:0,196,2515	0/0:31,0:31:93.30:0,93,1206	0/0:16,0:16:45.15:0,45,584	0/0:21,0:21:63.19:0,63,802	0/0:15,0:15:44.86:0,45,541	0/0:21,0:21:63.19:0,63,804	0/0:20,0:20:60.18:0,60,765	0/0:3,0:3:9.03:0,9,117
chr10	108383814	.	CGTGGTGGGTGGTACCATCCCTGGGCTG	C	5766.07	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.661;DP=526;FS=0.000;HRun=0;HaplotypeScore=332.8797;InbreedingCoeff=0.9674;MQ=59.99;MQ0=4;MQRankSum=-6.338;QD=83.57;ReadPosRankSum=0.617;VQSLOD=3.2429;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:99:0,105,9441	0/0:9,0:9:21.07:0,21,2400	0/0:10,0:6:15.02:0,15,707	0/0:12,0:6:15.05:0,15,704	0/0:13,0:13:36.12:0,36,3475	0/0:15,0:15:39.13:0,39,4110	0/0:31,0:31:90.31:0,90,9064	1/1:12,0:10:15.04:246,15,0	0/0:24,0:24:69.24:0,69,7843	0/0:25,0:25:69.23:0,69,7312	0/0:6,0:6:15.05:0,15,1281	0/0:31,0:31:93.32:0,93,10374	0/0:19,0:19:54.19:0,54,6271	0/0:17,0:17:51.18:0,51,5349	0/0:21,0:21:63.22:0,63,6393	0/0:21,0:20:63.22:0,63,6341	0/0:38,0:38:99:0,102,11221	0/0:24,0:24:66.19:0,66,7479	1/1:6,8:14:18.06:1031,18,0	1/1:2,6:7:15.05:1066,15,0	1/1:3,8:11:12.04:832,12,0	0/0:14,0:14:39.12:0,39,3490	0/0:9,0:9:27.09:0,27,2804	0/0:31,0:31:87.30:0,87,10303	0/0:11,0:11:33.11:0,33,3786	0/0:27,0:27:78.27:0,78,7429	1/1:8,16:23:36.12:2590,36,0	0/0:6,0:6:15.04:0,15,903
chr10	108383819	.	TGGGTGGTA	T	1446.06	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.252;DP=499;FS=0.695;HRun=0;HaplotypeScore=140.1196;InbreedingCoeff=0.9555;MQ=61.18;MQ0=5;MQRankSum=-6.941;QD=32.13;ReadPosRankSum=0.458;VQSLOD=3.2911;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:99:0,117,4928	0/0:9,0:9:27.09:0,27,1221	0/0:9,0:6:14.88:0,15,555	0/0:10,0:5:15.05:0,15,540	0/0:14,0:14:39.13:0,39,1722	0/0:14,0:14:42.14:0,42,1808	0/0:31,0:31:93.32:0,93,4091	1/1:2,4:5:13.27:183,13,0	0/0:24,0:24:72.25:0,72,3302	0/0:25,0:24:72.24:0,72,3104	0/0:6,0:6:18.06:0,18,749	0/0:32,0:32:96.33:0,96,4381	0/0:19,0:19:57.20:0,57,2588	0/0:17,0:17:51.18:0,51,2323	0/0:21,0:21:63.22:0,63,2828	0/0:21,0:20:63.22:0,63,2894	0/0:38,0:38:99:0,108,4799	0/0:22,0:22:18.61:0,19,2726	1/1:8,0:8:9.40:273,9,0	1/1:7,0:6:15.05:273,15,0	1/1:8,0:8:12.04:198,12,0	0/0:14,0:14:42.13:0,42,1707	0/0:10,0:10:30.10:0,30,1232	0/0:29,0:29:87.30:0,87,4028	0/0:11,0:11:33.11:0,33,1524	0/0:27,0:27:81.28:0,81,3445	1/1:16,0:16:36.12:686,36,0	0/0:5,0:5:15.04:0,15,555
chr10	108384140	.	AC	A	1064.81	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.240;DP=377;FS=9.117;HRun=8;HaplotypeScore=44.3488;InbreedingCoeff=0.8143;MQ=75.95;MQ0=0;MQRankSum=-0.318;QD=13.31;ReadPosRankSum=1.144;VQSLOD=1.9866;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,13:25:36.05:346,36,0	1/1:3,3:6:3:29,3,0	0/0:19,0:16:36.09:0,36,412	0/0:13,0:12:6.81:0,7,83	0/0:6,0:6:9.03:0,9,109	0/0:20,0:20:34.33:0,34,389	0/0:29,0:21:48.13:0,48,569	0/0:15,0:15:15.04:0,15,170	0/0:10,0:10:18.06:0,18,217	0/0:12,0:12:15.05:0,15,181	0/0:7,0:7:15.05:0,15,181	0/0:15,0:15:36.06:0,36,390	0/0:10,0:10:21.06:0,21,253	0/0:10,0:10:18.06:0,18,217	0/0:12,0:12:24.07:0,24,290	0/0:15,0:15:30.08:0,30,353	1/1:9,18:27:48.07:463,48,0	1/1:8,14:22:39.05:376,39,0	0/0:10,0:10:21.06:0,21,253	0/0:8,0:8:12.50:0,12,134	0/0:20,0:20:39.09:0,39,446	0/0:9,0:9:18.05:0,18,214	0/0:4,0:4:9.03:0,9,109	0/0:15,0:15:33.97:0,34,388	0/0:8,0:8:9.03:0,9,109	0/0:6,0:6:6.02:0,6,72	0/0:16,0:16:36.11:0,36,428	0/0:8,0:8:9.03:0,9,109
chr10	108385193	.	C	CT	2233.49	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-2.096;DP=485;FS=8.295;HRun=5;HaplotypeScore=56.4845;InbreedingCoeff=0.8109;MQ=77.43;MQ0=1;MQRankSum=0.469;QD=17.73;ReadPosRankSum=-0.342;VQSLOD=2.5176;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:7.92:0,8,106	1/1:0,5:5:3.01:39,3,0	0/0:29,0:16:9.03:0,9,139	0/0:12,0:9:7.02:0,7,58	0/0:14,0:13:32.94:0,33,297	0/0:20,0:20:53.76:0,54,500	0/0:15,0:15:30.76:0,31,310	1/1:9,19:28:68.15:747,68,0	0/0:14,0:14:42.05:0,42,412	0/0:21,0:21:47.64:0,48,443	0/0:13,0:13:26.39:0,26,279	0/0:13,0:13:33.03:0,33,323	0/0:22,0:22:54.02:0,54,521	0/0:13,0:13:29.27:0,29,267	0/0:28,0:28:80.99:0,81,748	0/0:20,0:20:38.38:0,38,380	0/1:22,0:22:15.21:15,0,41	0/0:20,0:20:7.01:0,7,110	1/1:3,8:11:24.04:274,24,0	1/1:5,12:17:34.95:352,35,0	1/1:2,11:13:27.09:353,27,0	0/0:15,0:15:35.43:0,35,321	0/0:8,0:8:20.37:0,20,207	0/0:16,0:16:45.07:0,45,451	0/0:13,0:13:26.97:0,27,246	0/0:15,0:15:39.07:0,39,393	1/1:5,25:30:51.08:634,51,0	0/0:10,0:10:26.92:0,27,241
chr10	108385198	.	T	TA	1431.22	PASS	AB=0.953;AC=17;AF=0.304;AN=56;BaseQRankSum=1.248;DP=492;FS=0.000;HRun=14;HaplotypeScore=55.6410;InbreedingCoeff=0.4514;MQ=71.84;MQ0=2;MQRankSum=0.382;QD=6.98;ReadPosRankSum=2.278;VQSLOD=2.3380;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:30:6.48:301,6,0	1/1:5,0:5:2.68:11,3,0	0/0:26,0:12:1.80:0,2,18	0/1:19,0:8:3.89:7,0,4	0/0:16,0:18:28.88:0,29,175	0/0:19,0:21:42.02:0,42,249	0/0:13,0:14:2.09:0,2,127	0/1:30,0:32:65.96:151,0,66	0/0:15,0:15:29.50:0,29,191	0/0:20,0:20:22.49:0,22,216	0/0:12,1:13:0.87:0,1,128	0/0:12,0:13:22.99:0,23,140	0/0:22,0:22:29.68:0,30,237	0/0:12,1:15:2.14:0,2,113	0/0:23,0:27:45.58:0,46,269	0/0:15,2:18:7.94:0,8,167	1/1:3,17:22:50.70:426,51,0	1/1:7,12:19:13.76:246,14,0	0/1:10,0:11:26.65:61,0,27	0/1:17,0:17:43.76:74,0,44	1/1:12,0:12:10.31:103,10,0	0/0:13,0:13:26.38:0,26,166	0/1:8,1:10:1.18:1,0,103	0/0:14,0:15:34.49:0,34,213	0/0:8,0:12:18.80:0,19,107	0/0:15,0:15:31.65:0,32,199	1/1:27,0:28:46.86:221,47,0	0/0:9,0:9:11.71:0,12,77
chr10	108387281	.	ACT	A	2204.97	PASS	AB=0.938;AC=9;AF=0.161;AN=56;BaseQRankSum=-0.489;DP=713;FS=0.357;HRun=0;HaplotypeScore=111.4368;InbreedingCoeff=0.3323;MQ=72.07;MQ0=5;MQRankSum=-1.284;QD=11.73;ReadPosRankSum=-1.707;VQSLOD=3.1632;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,1:38:26.64:0,27,543	0/1:13,0:13:16.87:54,0,17	0/0:33,0:20:34.16:0,34,382	0/0:34,0:19:26.96:0,27,299	0/0:21,0:21:41.96:0,42,688	0/0:29,0:29:67.77:0,68,746	0/0:33,0:33:43.18:0,43,733	1/1:25,0:25:50.64:530,51,0	0/0:18,0:18:26.95:0,27,360	0/0:26,0:25:41.86:0,42,628	0/0:20,0:20:41.08:0,41,579	0/0:15,0:15:42.45:0,42,420	0/0:12,0:12:9.23:0,9,319	0/0:19,0:19:50.54:0,51,563	0/0:25,0:25:50.52:0,51,624	0/0:26,0:26:40.72:0,41,822	0/0:28,0:27:56.50:0,56,492	0/0:26,0:26:45.91:0,46,514	1/1:19,0:19:20.68:361,21,0	0/1:18,4:22:43.30:349,0,43	0/1:64,2:66:99:665,0,190	0/0:16,0:16:30.01:0,30,482	0/0:19,0:19:38.44:0,38,520	0/0:43,0:43:54.76:0,55,1216	0/0:21,0:21:38.92:0,39,634	0/0:22,0:22:16.62:0,17,541	0/1:22,2:24:34:383,0,34	0/1:18,1:19:16.03:16,0,547
chr10	108387549	.	G	GACACAGAC	1545.80	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-2.732;DP=689;FS=10.968;HRun=0;HaplotypeScore=172.5258;InbreedingCoeff=0.9152;MQ=66.15;MQ0=7;MQRankSum=-6.895;QD=21.47;ReadPosRankSum=-2.100;VQSLOD=1.8099;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,9:35:18.06:686,18,0	0/0:10,0:10:15.05:0,15,375	0/0:35,0:23:5.57:0,6,72	0/0:33,0:23:10.61:0,11,165	0/0:21,0:21:42.13:0,42,952	0/0:20,0:20:45.14:0,45,967	0/0:26,0:26:36.12:0,36,840	0/0:33,0:33:30.10:0,30,609	0/0:28,0:28:45.09:0,45,1017	0/0:30,0:30:42.10:0,42,924	0/0:22,0:22:24.08:0,24,578	0/0:32,0:32:57.18:0,57,1350	0/0:21,0:21:42.14:0,42,1046	0/0:29,0:29:57.18:0,57,1375	0/0:21,0:21:36.12:0,36,850	0/0:14,0:14:21.06:0,21,475	1/1:12,6:19:12.04:484,12,0	1/1:11,5:17:16.52:512,17,0	0/0:23,0:21:16.20:0,16,344	0/0:17,0:17:24.08:0,24,555	0/0:45,0:45:78.25:0,78,1652	0/0:27,0:27:45.13:0,45,999	0/0:17,0:17:21.07:0,21,526	0/0:21,0:21:36.12:0,36,790	0/0:17,0:17:33.11:0,33,799	0/0:31,0:31:57.19:0,57,1293	0/0:29,0:29:60.15:0,60,1348	0/0:15,0:15:39.12:0,39,925
chr10	108389553	.	TGAGG	T	1559.39	PASS	AB=0.981;AC=14;AF=0.250;AN=56;BaseQRankSum=8.113;DP=416;FS=10.262;HRun=0;HaplotypeScore=68.6941;InbreedingCoeff=0.7784;MQ=76.91;MQ0=1;MQRankSum=1.368;QD=12.09;ReadPosRankSum=0.219;VQSLOD=1.3931;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,1:25:9.34:9,0,830	1/1:5,4:9:12.04:194,12,0	0/0:18,0:14:2.04:0,2,30	0/1:11,0:11:0:0,0,0	0/0:12,0:12:12.04:0,12,286	0/0:15,0:15:30.10:0,30,697	0/0:23,0:23:51.15:0,51,1111	1/1:11,1:12:3.01:48,3,0	0/0:13,0:13:24.07:0,24,523	0/0:14,0:13:24.08:0,24,516	0/0:10,0:10:21.07:0,21,506	0/0:27,0:27:51.14:0,51,1048	0/0:11,0:11:24.06:0,24,517	0/0:19,0:19:27.09:0,27,628	0/0:16,0:16:30.08:0,30,613	0/0:10,0:10:21.07:0,21,502	0/0:16,0:16:30.10:0,30,717	0/0:16,0:16:24.07:0,24,530	1/1:8,6:14:12.04:194,12,0	1/1:5,5:10:15.05:242,15,0	1/1:16,22:37:54.18:852,54,0	0/0:9,0:9:21.07:0,21,493	0/0:10,0:10:18.06:0,18,435	0/0:13,0:13:18.06:0,18,435	0/0:13,0:13:32.99:0,33,694	0/0:12,0:12:21.01:0,21,385	1/1:5,4:9:12.04:193,12,0	0/0:10,0:10:21.07:0,21,484
chr10	108389975	.	C	CCT	11083.25	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-16.518;DP=650;FS=3.125;HRun=0;HaplotypeScore=71.2255;InbreedingCoeff=0.9976;MQ=78.32;MQ0=2;MQRankSum=-0.253;QD=42.63;ReadPosRankSum=-0.351;VQSLOD=6.3739;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,43:48:99:2051,117,0	1/1:2,6:8:18.06:315,18,0	0/0:19,0:18:33.95:0,34,398	0/0:11,0:11:21.01:0,21,250	0/0:12,0:12:33.10:0,33,432	0/0:16,0:16:45.15:0,45,608	0/0:19,0:19:54.16:0,54,713	1/1:3,24:27:72.21:1167,72,0	0/0:28,0:28:81.25:0,81,1067	0/0:23,0:23:66.17:0,66,834	0/0:11,0:11:33.11:0,33,445	0/0:27,0:27:75.25:0,75,1015	0/0:30,0:30:81.27:0,81,1090	0/0:29,0:29:81.25:0,81,1080	0/0:31,0:31:87.27:0,87,1161	0/0:24,0:24:72.24:0,72,974	1/1:1,45:48:99:2262,129,0	1/1:1,24:25:60.21:1052,60,0	1/1:5,20:25:63.15:1003,63,0	1/1:0,11:11:27.09:460,27,0	1/1:0,44:45:99:1932,111,0	0/0:17,0:17:48.16:0,48,649	0/0:9,0:9:27.09:0,27,365	0/0:35,0:35:93.28:0,93,1211	0/0:18,0:18:54.16:0,54,712	0/0:17,0:17:42.13:0,42,555	1/1:0,22:21:48.16:842,48,0	0/0:14,0:14:36.12:0,36,487
chr10	108390741	.	CT	C	2024.11	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.388;DP=594;FS=1.347;HRun=11;HaplotypeScore=68.5815;InbreedingCoeff=0.9711;MQ=75.67;MQ0=2;MQRankSum=-1.048;QD=16.59;ReadPosRankSum=0.576;VQSLOD=4.5565;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,1:43:89.47:0,89,1139	1/1:1,2:3:5.99:49,6,0	0/0:24,0:21:39.62:0,40,333	0/0:20,0:16:23.70:0,24,200	0/0:24,1:26:34.37:0,34,521	0/0:25,1:28:25.97:0,26,661	0/0:12,0:12:24.06:0,24,256	1/1:11,18:29:47.88:393,48,0	0/0:19,0:18:35.41:0,35,467	0/0:22,0:23:59.98:0,60,622	0/0:15,0:15:36.09:0,36,384	0/0:19,0:19:33.08:0,33,350	0/0:13,0:12:25.23:0,25,296	0/0:14,0:15:38.75:0,39,374	0/0:14,0:14:36.09:0,36,384	0/0:14,0:14:33.08:0,33,352	0/0:39,0:39:99:0,101,1059	0/0:20,0:20:56.67:0,57,565	1/1:3,25:28:74.89:613,75,0	1/1:3,20:23:53.92:443,54,0	1/1:1,18:19:38.91:314,39,0	0/0:18,2:20:17.45:0,17,385	0/0:22,2:24:32.50:0,32,551	0/0:22,0:24:56.98:0,57,588	0/0:17,0:18:50.95:0,51,516	0/0:16,1:17:14.44:0,14,347	1/1:1,19:20:47.94:394,48,0	0/0:24,0:25:71.98:0,72,733
chr10	108391473	.	TTGTG	T	2423.57	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.252;DP=834;FS=3.910;HRun=0;HaplotypeScore=137.8103;InbreedingCoeff=0.9021;MQ=70.28;MQ0=5;MQRankSum=-0.456;QD=14.26;ReadPosRankSum=1.678;VQSLOD=3.3921;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:38:72.11:0,72,1313	0/0:8,0:12:12.50:0,12,191	0/0:28,0:15:6.02:0,6,74	0/0:30,0:20:6.02:0,6,103	0/0:22,0:22:36.12:0,36,767	0/0:20,0:20:42.13:0,42,732	0/0:26,1:32:8.84:0,9,991	1/1:31,4:35:15.04:216,15,0	0/0:33,0:36:74.73:0,75,1583	0/0:36,1:39:5.60:0,6,810	0/0:17,0:18:38.64:0,39,735	0/0:28,0:31:34.80:0,35,1121	0/0:35,0:38:77.63:0,78,1618	0/0:37,0:40:80.48:0,80,1564	0/0:36,0:41:83.49:0,83,1662	0/0:36,1:41:46.30:0,46,1788	0/0:17,0:18:35.59:0,36,721	0/0:21,0:22:42.06:0,42,856	1/1:18,5:24:15.04:220,15,0	1/1:9,14:23:39.13:595,39,0	1/1:35,21:56:51.17:816,51,0	0/0:28,0:29:56.86:0,57,1215	0/0:18,0:18:39.13:0,39,860	0/0:32,0:39:80.21:0,80,1595	0/0:14,0:19:29.04:0,29,438	0/0:23,0:26:56.29:0,56,941	1/1:9,20:30:48.15:747,48,0	0/0:21,0:24:35.33:0,35,649
chr10	108394138	.	AGCTCCGACT	A	2509.03	PASS	AB=0.600;AC=9;AF=0.167;AN=54;BaseQRankSum=8.562;DP=434;FS=3.310;HRun=0;HaplotypeScore=109.9506;InbreedingCoeff=0.8197;MQ=53.27;MQ0=12;MQRankSum=-7.403;QD=44.02;ReadPosRankSum=-0.381;VQSLOD=3.2415;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.20:0,57,2667	0/0:3,0:3:9.03:0,9,434	./.	0/0:19,0:4:8.23:0,8,138	0/0:21,0:21:42.13:0,42,1875	0/0:16,0:16:42.14:0,42,2012	0/0:29,0:29:81.26:0,81,3691	0/1:5,10:14:99:574,0,118	0/0:19,0:19:54.19:0,54,2507	0/0:14,0:14:42.13:0,42,1910	0/0:7,0:7:15.05:0,15,725	0/0:19,0:19:51.15:0,51,2375	0/0:17,0:17:45.13:0,45,2023	0/0:21,0:21:57.20:0,57,2623	0/0:13,0:13:39.13:0,39,1835	0/0:13,0:13:39.13:0,39,1877	0/0:23,0:22:60.21:0,60,2895	0/0:20,0:18:54.19:0,54,2537	1/1:3,6:8:12.04:364,12,0	1/1:3,11:13:27.05:747,27,0	1/1:2,8:9:18.02:349,18,0	0/0:11,0:11:30.10:0,30,1361	0/0:11,0:11:24.08:0,24,1082	0/0:32,0:31:90.25:0,90,3931	0/0:6,0:6:18.06:0,18,870	0/0:15,0:15:42.14:0,42,1900	1/1:0,9:8:21.07:635,21,0	0/0:14,0:14:36.11:0,36,1618
chr10	108394292	.	TA	T	1335.51	PASS	AB=0.982;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.797;DP=488;FS=10.272;HRun=9;HaplotypeScore=61.0831;InbreedingCoeff=0.2685;MQ=71.75;MQ0=15;MQRankSum=0.319;QD=5.45;ReadPosRankSum=1.135;VQSLOD=0.2719;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:36.02:329,36,0	0/1:5,0:5:5.66:35,0,6	0/0:56,0:21:21.32:0,21,267	0/1:39,0:17:12.79:13,0,127	0/0:15,0:15:24.74:0,25,236	0/0:14,0:15:24.02:0,24,262	0/0:15,0:15:30.06:0,30,324	0/1:20,0:16:12.60:90,0,13	0/0:13,0:13:24.03:0,24,247	0/0:17,0:17:9.08:0,9,283	0/0:6,0:6:12.02:0,12,128	0/0:19,0:18:23.99:0,24,243	0/1:10,0:10:12.22:12,0,82	0/1:13,1:14:0.53:1,0,210	0/0:11,0:11:24.03:0,24,247	0/0:10,0:10:18.05:0,18,208	1/1:7,31:35:48.02:439,48,0	1/1:0,21:21:42.02:384,42,0	0/1:23,1:21:58.02:91,0,58	0/1:4,0:4:2.83:18,0,3	0/1:30,1:29:78.30:82,0,78	0/0:4,0:4:9.01:0,9,94	0/0:14,0:13:26.82:0,27,237	0/0:14,0:14:21.05:0,21,230	0/0:9,0:9:21.02:0,21,212	0/0:15,0:16:38.92:0,39,374	0/1:14,0:13:12.46:12,0,52	0/0:7,0:7:12.04:0,12,138
chr10	108397345	.	GAC	G	952.17	PASS	AB=0.959;AC=9;AF=0.161;AN=56;BaseQRankSum=13.823;DP=485;FS=31.568;HRun=0;HaplotypeScore=84.5527;InbreedingCoeff=0.1528;MQ=75.12;MQ0=1;MQRankSum=-2.030;QD=4.35;ReadPosRankSum=9.694;VQSLOD=0.0379;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:30,1:30:10.73:135,0,11	0/0:7,0:7:8.97:0,9,88	0/0:10,0:9:19.48:0,19,180	0/0:15,0:15:36.28:0,36,406	0/0:7,0:7:18:0,18,222	0/0:13,0:13:38.88:0,39,551	0/0:24,0:24:68.70:0,69,851	0/1:25,1:27:39.97:40,0,190	0/0:11,0:11:29.98:0,30,413	0/0:8,0:8:18.05:0,18,242	0/0:5,0:5:11.98:0,12,116	0/0:22,0:22:57:0,57,847	0/0:19,0:19:51.34:0,51,719	0/0:10,0:10:24.03:0,24,343	0/0:15,0:15:37.33:0,37,592	0/0:17,0:17:42.58:0,43,777	1/1:30,1:31:46.93:247,47,0	0/1:28,0:28:16.35:155,0,16	0/1:20,2:22:59.89:146,0,60	0/1:16,0:16:74.27:74,0,77	0/1:40,1:41:79.46:156,0,79	0/0:15,0:15:41.56:0,42,677	0/0:7,0:7:21.07:0,21,389	0/0:26,0:26:75.09:0,75,1239	0/0:11,0:11:24.03:0,24,374	0/0:14,0:16:38.29:0,38,501	0/1:21,2:23:2.71:146,0,3	0/0:8,0:8:24.08:0,24,398
chr10	108397346	.	ACC	A	5122.89	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=7.503;DP=485;FS=40.171;HRun=11;HaplotypeScore=72.1364;InbreedingCoeff=0.8834;MQ=75.04;MQ0=1;MQRankSum=0.522;QD=22.47;ReadPosRankSum=6.529;VQSLOD=1.2823;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:30:71.90:741,72,0	0/0:3,0:7:3:0,3,29	0/1:10,0:9:0.40:0,0,49	0/0:12,0:15:21.38:0,21,214	0/0:8,0:8:12.04:0,12,183	0/0:11,0:12:23.57:0,24,332	0/0:22,0:25:38.56:0,39,484	1/1:11,16:27:44.97:465,45,0	0/0:9,0:11:20.52:0,21,238	0/0:6,0:7:12.04:0,12,165	0/0:5,0:5:3:0,3,26	0/0:21,0:22:42.53:0,43,520	0/0:19,0:19:38.85:0,39,460	0/0:8,0:11:20.53:0,21,243	0/0:15,0:16:38.50:0,38,462	0/0:17,0:17:42.60:0,43,624	1/1:2,29:31:87.21:925,87,0	1/1:2,24:27:68.90:714,69,0	1/1:6,15:22:53.86:553,54,0	1/1:5,11:16:27.03:287,27,0	1/1:8,33:41:84.18:894,84,0	0/0:13,0:15:38.09:0,38,493	0/0:7,0:7:21.05:0,21,298	0/0:23,0:26:65.19:0,65,925	0/0:11,0:11:15.05:0,15,231	0/0:15,0:15:17.55:0,18,238	1/1:4,19:23:51.12:541,51,0	0/0:8,0:8:24.01:0,24,282
chr10	108399131	.	CTT	C	2079.67	PASS	AB=0.542;AC=12;AF=0.214;AN=56;BaseQRankSum=4.146;DP=572;FS=2.032;HRun=13;HaplotypeScore=81.3661;InbreedingCoeff=0.7531;MQ=67.84;MQ0=2;MQRankSum=-1.156;QD=10.78;ReadPosRankSum=-0.362;VQSLOD=2.3652;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:7,3:44:3.91:4,0,252	0/0:1,0:6:12.48:0,12,43	0/0:9,0:5:2.58:0,3,29	0/0:11,0:10:5.97:0,6,129	0/0:32,0:34:84.99:0,85,1148	0/0:24,0:24:59.78:0,60,821	0/0:16,0:17:39.08:0,39,521	1/1:11,29:42:71.64:729,72,0	0/0:17,0:17:45.14:0,45,633	0/0:18,0:18:33.10:0,33,454	0/0:16,0:16:44.67:0,45,557	0/0:18,0:19:41.63:0,42,568	0/0:17,0:17:45.14:0,45,626	0/0:18,0:18:51.17:0,51,726	0/0:15,0:15:41.87:0,42,565	0/0:16,0:16:39.09:0,39,500	0/1:4,3:27:30.40:30,0,117	0/0:1,0:18:39.80:0,40,137	1/1:9,15:24:43.63:426,44,0	1/1:4,17:21:48.01:466,48,0	1/1:7,7:14:13.31:193,13,0	0/0:15,0:16:44.28:0,44,532	0/0:19,0:19:51.12:0,51,665	0/0:22,0:22:65.66:0,66,862	0/0:25,0:25:60.19:0,60,850	0/0:22,0:23:39.06:0,39,489	1/1:4,17:21:42:407,42,0	0/0:19,0:19:39.11:0,39,545
chr10	108399640	.	GACAGACAA	G	1099	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-3.547;DP=724;FS=3.112;HRun=0;HaplotypeScore=186.7535;InbreedingCoeff=0.1688;MQ=63.64;MQ0=4;MQRankSum=2.289;QD=8.45;ReadPosRankSum=-2.425;VQSLOD=2.4298;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,132,1294	1/1:0,7:7:12.29:223,12,0	0/0:32,0:30:80.26:0,80,952	0/0:22,0:20:40.26:0,40,695	0/0:39,0:39:99:0,114,3465	0/0:21,0:21:60.14:0,60,2000	0/0:37,0:37:99:0,105,2792	0/1:24,0:24:99:393,0,160	0/0:19,0:19:56.74:0,57,1200	0/0:30,0:29:81.17:0,81,2033	0/0:23,0:23:66.12:0,66,1910	0/0:24,0:24:70.36:0,70,1882	0/0:16,0:16:42.06:0,42,1066	0/0:31,0:31:93.16:0,93,2451	0/0:23,0:23:69.10:0,69,1678	0/0:26,0:26:78.04:0,78,1679	0/0:27,0:26:65.97:0,66,648	0/0:23,0:23:54.05:0,54,588	0/1:19,0:16:99:127,0,392	0/1:25,0:25:99:172,0,688	0/1:29,0:29:99:191,0,1152	0/0:18,0:18:51.08:0,51,1218	0/0:23,0:23:66.07:0,66,1861	0/0:40,0:39:99:0,117,3824	0/0:22,0:22:63.06:0,63,1418	0/0:33,0:33:96.24:0,96,2323	0/1:26,0:25:99:127,0,1222	0/0:10,0:10:30.07:0,30,1049
chr10	108399644	.	GACAA	G	2227.55	PASS	AB=0.889;AC=10;AF=0.179;AN=56;BaseQRankSum=7.138;DP=731;FS=0.000;HRun=0;HaplotypeScore=124.1693;InbreedingCoeff=0.5284;MQ=62.13;MQ0=6;MQRankSum=1.450;QD=12.51;ReadPosRankSum=1.855;VQSLOD=3.2677;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,37:55:81.23:1248,81,0	1/1:7,0:7:11.81:96,12,0	0/0:30,0:29:7.97:0,8,97	0/1:24,0:21:2.99:3,0,83	0/0:39,0:39:37.56:0,38,1643	0/0:21,0:21:33.18:0,33,991	0/0:38,0:38:62.56:0,63,1250	0/0:26,0:26:10.81:0,11,330	0/1:18,1:19:20.54:21,0,496	0/0:32,0:31:54.13:0,54,925	0/0:24,0:24:39.13:0,39,873	0/0:25,0:25:48.12:0,48,930	0/0:14,0:14:24.04:0,24,472	0/0:31,1:32:6.53:0,7,1031	0/0:23,0:23:33.11:0,33,736	0/0:25,0:25:33.11:0,33,700	1/1:10,18:27:33.11:524,33,0	0/1:8,15:23:4.52:485,0,5	0/1:22,0:17:0.94:1,0,354	0/0:25,0:25:17.36:0,17,683	0/0:29,0:29:45.10:0,45,923	0/0:18,0:18:24.07:0,24,494	0/0:22,1:23:0.51:0,1,896	0/0:41,0:40:87.24:0,87,1909	0/0:21,0:21:27.09:0,27,600	0/0:32,0:32:10.74:0,11,920	0/0:25,0:24:51.15:0,51,1079	0/0:10,0:10:24.07:0,24,523
chr10	108400805	.	T	TTTTG	4421.70	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.303;DP=557;FS=0.000;HRun=0;HaplotypeScore=91.8623;InbreedingCoeff=0.9526;MQ=61.11;MQ0=2;MQRankSum=1.720;QD=33.75;ReadPosRankSum=-1.363;VQSLOD=4.5873;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:25:22.27:0,22,199	0/0:3,0:7:12.01:0,12,112	0/0:23,0:19:12.02:0,12,157	0/0:17,0:14:12.04:0,12,191	0/0:22,0:22:42.13:0,42,653	0/0:25,0:25:51.15:0,51,777	0/0:22,0:22:39.13:0,39,628	1/1:21,8:32:33.02:542,33,0	0/0:15,0:15:27.08:0,27,411	0/0:24,0:23:51.17:0,51,818	0/0:14,0:14:29.84:0,30,458	0/0:14,0:14:27.09:0,27,432	0/0:13,0:13:30.10:0,30,483	0/0:17,0:17:24.08:0,24,387	0/0:23,0:23:39.12:0,39,605	0/0:15,0:15:27.09:0,27,435	0/0:15,0:22:15.01:0,15,136	0/0:10,0:15:12.01:0,12,112	1/1:12,9:20:30.06:642,30,0	1/1:9,19:28:60.20:1361,60,0	1/1:5,17:23:45.15:1083,45,0	0/0:17,0:17:27.08:0,27,406	0/0:19,0:19:39.13:0,39,628	0/0:33,0:33:78.22:0,78,1228	0/0:14,0:14:30.10:0,30,483	0/0:25,0:25:39.13:0,39,625	1/1:12,11:24:33.11:794,33,0	0/0:4,0:4:9.02:0,9,121
chr10	108401257	.	A	AT	2309.32	PASS	AB=1.000;AC=13;AF=0.250;AN=52;BaseQRankSum=2.357;DP=324;FS=0.000;HRun=2;HaplotypeScore=39.8166;InbreedingCoeff=0.8288;MQ=68.67;MQ0=0;MQRankSum=-0.045;QD=27.17;ReadPosRankSum=-4.106;VQSLOD=1.9723;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.22:0,75,913	1/1:0,4:4:12.04:172,12,0	0/0:6,0:3:6.02:0,6,74	0/1:15,0:10:19.51:20,0,89	0/0:13,0:13:36.09:0,36,421	0/0:15,0:15:45.13:0,45,544	0/0:7,0:7:18.94:0,19,225	1/1:1,30:31:87.20:1137,87,0	0/0:7,0:7:18.04:0,18,200	0/0:8,0:8:18.05:0,18,215	0/0:11,0:11:33.06:0,33,363	0/0:12,0:12:33.07:0,33,373	0/0:9,0:9:24.07:0,24,286	0/0:9,0:9:27.06:0,27,308	0/0:10,0:10:30.09:0,30,360	0/0:10,0:10:30.08:0,30,359	0/0:29,0:29:84.23:0,84,1012	0/0:19,0:19:54.13:0,54,641	1/1:0,16:16:48.16:682,48,0	1/1:1,5:5:6.02:86,6,0	1/1:0,6:6:9.03:129,9,0	./.	0/0:6,0:6:15:0,15,167	./.	0/0:11,0:11:27.07:0,27,315	0/0:13,0:12:33.06:0,33,364	1/1:0,7:7:18.06:259,18,0	0/0:19,0:19:57.18:0,57,705
chr10	108409069	.	CT	C	3537.74	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.111;DP=651;FS=6.265;HRun=1;HaplotypeScore=96.1112;InbreedingCoeff=0.9971;MQ=78.39;MQ0=0;MQRankSum=-11.456;QD=35.73;ReadPosRankSum=-4.301;VQSLOD=1.8486;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1704	0/0:13,0:13:39.13:0,39,613	0/0:17,0:17:48.16:0,48,753	0/0:18,0:18:48.16:0,48,754	0/0:12,0:12:36.12:0,36,568	0/0:17,0:17:48.16:0,48,767	0/0:41,0:41:99:0,123,1966	1/1:0,23:23:69.23:963,69,0	0/0:23,0:23:69.24:0,69,1098	0/0:36,0:36:99:0,105,1658	0/0:9,0:9:18.06:0,18,270	0/0:43,0:43:99:0,126,1980	0/0:22,0:22:63.18:0,63,960	0/0:28,0:28:84.29:0,84,1340	0/0:20,0:20:54.18:0,54,863	0/0:21,0:21:63.20:0,63,984	0/0:40,0:40:99:0,117,1865	0/0:35,0:35:99:0,102,1568	1/1:1,15:16:48.16:669,48,0	1/1:0,8:8:21.07:292,21,0	1/1:3,31:34:72.23:984,72,0	0/0:17,0:17:48.15:0,48,744	0/0:14,0:14:39.12:0,39,600	0/0:32,0:32:93.32:0,93,1481	0/0:16,0:16:48.16:0,48,766	0/0:28,0:28:84.29:0,84,1342	1/1:0,18:18:45.62:629,46,0	0/0:14,0:14:42.12:0,42,647
chr10	108409077	.	TTCCCAGGCC	T	5326.12	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.642;DP=644;FS=8.774;HRun=0;HaplotypeScore=191.6655;InbreedingCoeff=0.9986;MQ=80.53;MQ0=0;MQRankSum=-11.336;QD=58.53;ReadPosRankSum=-1.963;VQSLOD=3.2454;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,5022	0/0:12,0:12:33.11:0,33,1464	0/0:17,0:17:45.15:0,45,1661	0/0:21,0:21:57.16:0,57,2113	0/0:15,0:15:42.14:0,42,1934	0/0:17,0:17:45.14:0,45,1902	0/0:42,0:42:99:0,117,5290	1/1:7,15:22:45.15:1378,45,0	0/0:22,0:22:63.22:0,63,2925	0/0:30,0:30:87.30:0,87,4096	0/0:9,0:9:27.09:0,27,1218	0/0:40,0:40:99:0,114,5341	0/0:26,0:26:72.25:0,72,3357	0/0:28,0:28:84.29:0,84,4085	0/0:21,0:21:57.18:0,57,2528	0/0:23,0:23:66.23:0,66,3003	0/0:39,0:39:99:0,108,5054	0/0:35,0:35:99:0,99,4572	1/1:6,11:17:36.10:885,36,0	1/1:0,8:8:21.07:642,21,0	1/1:10,20:30:48.16:1411,48,0	0/0:17,0:17:51.16:0,51,2249	0/0:15,0:15:45.15:0,45,1908	0/0:29,0:29:87.30:0,87,3964	0/0:19,0:19:57.20:0,57,2664	0/0:25,0:25:75.25:0,75,3402	1/1:2,12:13:33.10:1010,33,0	0/0:13,0:13:39.13:0,39,1788
chr10	108409086	.	C	CAT	994.40	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.338;DP=658;FS=7.389;HRun=0;HaplotypeScore=121.3703;InbreedingCoeff=0.9287;MQ=81.18;MQ0=0;MQRankSum=-6.177;QD=10.04;ReadPosRankSum=-4.957;VQSLOD=1.8174;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1828	0/0:13,0:13:36.10:0,36,550	0/0:21,0:21:54.16:0,54,835	0/0:18,0:18:48.16:0,48,772	0/0:17,0:17:51.16:0,51,807	0/0:14,0:14:42.14:0,42,683	0/0:40,0:40:99:0,120,1931	1/1:21,0:21:11.22:422,11,0	0/0:20,0:20:60.19:0,60,955	0/0:30,0:30:90.31:0,90,1464	0/0:9,0:9:27.09:0,27,440	0/0:44,0:44:99:0,129,2056	0/0:29,0:29:84.29:0,84,1370	0/0:31,0:31:93.32:0,93,1514	0/0:19,0:19:57.19:0,57,926	0/0:23,0:23:66.21:0,66,1050	0/0:39,0:39:99:0,114,1855	0/0:35,0:35:99:0,102,1654	1/1:15,0:15:18.73:366,19,0	1/1:9,0:9:2.58:50,3,0	1/1:31,5:37:13.47:126,13,0	0/0:15,0:15:45.15:0,45,734	0/0:13,0:13:39.13:0,39,615	0/0:32,0:32:96.28:0,96,1532	0/0:21,0:21:63.21:0,63,1006	0/0:25,0:25:75.22:0,75,1194	1/1:17,0:17:10.90:189,11,0	0/0:13,0:13:39.13:0,39,617
chr10	108417609	.	T	TG	4862.63	PASS	AB=0.526;AC=11;AF=0.196;AN=56;BaseQRankSum=-10.039;DP=639;FS=4.457;HRun=4;HaplotypeScore=67.5197;InbreedingCoeff=0.9055;MQ=96.35;MQ0=0;MQRankSum=-2.594;QD=32.64;ReadPosRankSum=-1.635;VQSLOD=4.8700;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.22:0,90,1007	0/1:1,9:10:6.94:300,0,7	0/0:34,0:34:54.14:0,54,830	0/0:29,0:29:65.76:0,66,709	0/0:18,0:18:51.13:0,51,561	0/0:19,0:19:54.14:0,54,601	0/0:20,0:20:54.12:0,54,593	1/1:6,30:36:93.30:1255,93,0	0/0:18,0:18:54.15:0,54,612	0/0:23,0:23:66.17:0,66,733	0/0:11,0:11:21.06:0,21,238	0/0:30,0:30:87.22:0,87,965	0/0:17,0:17:45.12:0,45,502	0/0:21,0:21:51.13:0,51,570	0/0:22,0:22:66.16:0,66,735	0/0:24,0:24:50.25:0,50,751	0/0:42,0:42:99:0,111,1259	0/0:25,0:25:75.19:0,75,839	1/1:4,22:26:69.20:910,69,0	1/1:1,17:18:42.07:551,42,0	1/1:2,34:36:84.28:1148,84,0	0/0:18,0:18:51.15:0,51,578	0/0:11,0:11:27.07:0,27,299	0/0:32,0:32:93.21:0,93,1022	0/0:13,0:13:39.11:0,39,442	0/0:20,0:20:45.12:0,45,509	1/1:2,21:23:51.17:698,51,0	0/0:9,0:9:24.07:0,24,272
chr10	108418595	.	GAGGGGA	G	5487.32	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.128;DP=606;FS=3.242;HRun=0;HaplotypeScore=131.5449;InbreedingCoeff=0.9771;MQ=92.77;MQ0=0;MQRankSum=-11.811;QD=48.99;ReadPosRankSum=-1.599;VQSLOD=4.7378;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.25:0,90,2743	1/1:0,3:3:6.02:139,6,0	0/0:27,0:28:75.59:0,76,2255	0/0:28,0:28:70.47:0,70,2356	0/0:16,0:16:48.15:0,48,1608	0/0:21,0:21:60.20:0,60,2081	0/0:23,0:23:69.24:0,69,2260	1/1:5,22:27:66.20:1420,66,0	0/0:25,0:25:75.20:0,75,2356	0/0:19,0:19:51.16:0,51,1638	0/0:11,0:11:33.11:0,33,1059	0/0:36,0:36:99:0,108,3556	0/0:18,0:18:51.18:0,51,1816	0/0:20,0:20:54.19:0,54,1883	0/0:39,0:39:99:0,108,3572	0/0:32,0:32:90.31:0,90,3087	0/0:33,0:32:99:0,99,3169	0/0:21,0:21:57.20:0,57,1993	1/1:3,16:19:48.11:1036,48,0	1/1:1,11:12:21.07:496,21,0	1/1:2,21:23:35.94:848,36,0	0/0:17,0:17:51.15:0,51,1672	0/0:8,0:8:24.08:0,24,792	0/0:21,0:21:63.17:0,63,2022	0/0:12,0:12:36.12:0,36,1177	0/0:24,0:24:69.23:0,69,2300	1/1:2,26:28:66.23:1548,66,0	0/0:12,0:12:36.12:0,36,1257
chr10	108418750	.	G	GT	2642.68	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.372;DP=523;FS=0.000;HRun=0;HaplotypeScore=73.5937;InbreedingCoeff=0.7920;MQ=85.08;MQ0=0;MQRankSum=-2.246;QD=31.09;ReadPosRankSum=6.592;VQSLOD=3.2356;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,20:26:51.94:659,52,0	0/0:4,0:4:2.87:0,3,20	0/0:25,0:25:52.53:0,53,670	0/0:22,0:22:62.01:0,62,613	0/0:3,0:3:3.01:0,3,42	0/0:8,0:8:23.98:0,24,263	0/0:25,0:25:64.22:0,64,704	0/0:17,0:17:29.88:0,30,239	0/0:30,0:30:90.04:0,90,1030	0/0:16,0:16:36.02:0,36,422	0/0:11,0:11:8.59:0,9,192	0/0:26,0:26:24.01:0,24,269	0/0:21,0:21:50.98:0,51,510	0/0:22,0:22:63.08:0,63,738	0/0:42,0:42:99:0,118,1244	0/0:23,0:23:63.56:0,64,719	1/1:0,38:38:99:1413,102,0	1/1:0,21:21:51.64:711,52,0	0/0:9,0:9:14.44:0,14,114	0/0:5,0:4:1.64:0,2,17	0/0:32,0:32:39.27:0,39,286	0/0:12,0:12:32.97:0,33,369	0/0:6,0:6:12.02:0,12,136	0/0:30,0:30:87.59:0,88,1017	0/0:10,0:10:23.96:0,24,273	0/0:13,0:13:29.95:0,30,323	0/0:15,0:15:15.74:0,16,139	0/0:11,0:11:33.01:0,33,371
chr10	108419162	.	AAAAG	A	80.39	PASS	AB=0.938;AC=5;AF=0.089;AN=56;BaseQRankSum=3.554;DP=568;FS=11.215;HRun=0;HaplotypeScore=104.1911;InbreedingCoeff=-0.0911;MQ=72.31;MQ0=13;MQRankSum=3.128;QD=1.34;ReadPosRankSum=-0.585;VQSLOD=0.5820;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:34.16:0,34,410	0/1:5,4:9:22.50:67,0,22	0/0:32,0:20:40.47:0,40,438	0/1:23,0:16:5.28:5,0,132	0/0:34,0:32:67.10:0,67,738	0/0:25,0:25:64.80:0,65,923	0/0:17,0:17:41.75:0,42,457	0/1:8,0:8:32.71:33,0,68	0/0:22,0:22:47.99:0,48,792	0/0:27,0:27:60.03:0,60,798	0/0:27,0:26:62.91:0,63,763	0/0:20,0:20:35.88:0,36,510	0/0:19,0:19:40.09:0,40,526	0/0:23,0:22:41.79:0,42,538	0/0:32,0:32:80.63:0,81,1076	0/0:21,0:21:47.75:0,48,563	0/0:27,0:27:25.73:0,26,247	0/0:17,0:16:20.62:0,21,159	0/1:11,0:11:76.05:76,0,96	0/1:9,0:9:9.29:9,0,71	0/0:5,0:5:11.69:0,12,71	0/0:19,0:19:47.01:0,47,559	0/0:19,0:19:30.49:0,30,413	0/0:20,0:20:36.04:0,36,615	0/0:16,0:14:29.91:0,30,391	0/0:23,0:23:68.32:0,68,839	0/0:14,0:13:13.31:0,13,219	0/0:18,0:17:44.97:0,45,609
chr10	108419165	.	AG	A	682.46	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=6.714;DP=502;FS=8.310;HRun=1;HaplotypeScore=67.9377;InbreedingCoeff=0.8613;MQ=81.75;MQ0=11;MQRankSum=0.748;QD=9.22;ReadPosRankSum=-0.065;VQSLOD=0.4306;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:58.41:0,58,392	1/1:5,1:6:14.81:108,15,0	0/0:36,0:24:4.55:0,5,331	0/1:25,0:18:11.71:12,0,125	0/0:26,1:26:43.91:0,44,353	0/0:25,0:25:58.14:0,58,487	0/0:15,0:15:32.35:0,32,256	1/1:8,0:8:16.44:117,16,0	0/0:19,1:20:40:0,40,363	0/0:21,1:22:59.16:0,59,499	0/0:28,1:28:57.56:0,58,447	0/0:13,0:13:23.74:0,24,209	0/0:15,1:16:28.18:0,28,265	0/0:20,1:20:29.54:0,30,274	0/0:23,2:25:37.35:0,37,425	0/0:17,0:17:25.74:0,26,238	0/0:20,0:20:22.14:0,22,134	0/0:16,0:15:15.14:0,15,101	1/1:10,0:10:25.53:209,26,0	1/1:7,0:7:17.15:122,17,0	1/1:4,0:4:11.74:81,12,0	0/0:17,0:17:38.75:0,39,302	0/0:17,0:17:28.17:0,28,233	0/0:15,0:15:34.09:0,34,254	0/0:13,0:11:20.28:0,20,169	0/0:21,0:21:42.48:0,42,410	1/1:14,0:13:34.14:219,34,0	0/0:18,0:18:45.84:0,46,350
chr10	108420409	.	G	GC	2308.01	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-3.993;DP=499;FS=8.290;HRun=7;HaplotypeScore=55.6314;InbreedingCoeff=0.9648;MQ=82.02;MQ0=0;MQRankSum=-1.399;QD=21.77;ReadPosRankSum=-0.779;VQSLOD=2.6975;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:81.11:0,81,782	1/1:1,5:6:12.04:145,12,0	0/0:12,0:12:23.81:0,24,213	0/0:19,0:19:36.92:0,37,342	0/0:6,0:6:18.03:0,18,174	0/0:8,0:8:24.04:0,24,232	0/0:49,0:49:99:0,123,1179	1/1:3,7:10:17.99:178,18,0	0/0:9,0:9:24.04:0,24,232	0/0:12,0:12:33.04:0,33,313	0/0:8,0:8:21.03:0,21,203	0/0:16,0:16:39.05:0,39,377	0/0:8,0:8:15.02:0,15,145	0/0:16,0:16:45.07:0,45,435	0/0:10,0:10:30.03:0,30,284	0/0:9,0:8:24.04:0,24,232	0/0:40,0:40:99:0,99,941	0/0:44,0:44:99:0,108,1037	1/1:4,12:17:9.96:368,10,0	1/1:1,5:6:12.02:131,12,0	1/1:12,42:54:99:1304,108,0	0/0:11,0:11:33:0,33,309	0/0:7,0:7:18.03:0,18,174	0/0:29,0:29:75.10:0,75,718	0/0:21,0:21:57.09:0,57,550	0/0:20,0:20:48.06:0,48,459	1/1:1,12:13:30.09:362,30,0	0/0:6,0:6:18.03:0,18,174
chr10	108420475	.	C	CTGGGCT	5173.64	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-5.548;DP=573;FS=3.673;HRun=0;HaplotypeScore=120.7951;InbreedingCoeff=0.9686;MQ=83.61;MQ0=0;MQRankSum=-8.693;QD=46.61;ReadPosRankSum=-5.306;VQSLOD=3.7890;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,112,2332	1/1:1,5:8:12.04:398,12,0	0/0:15,0:15:7.75:0,8,219	0/0:22,0:22:38.79:0,39,584	0/0:8,0:8:24.06:0,24,469	0/0:10,0:10:30.07:0,30,519	0/0:39,0:39:78.24:0,78,1503	1/1:3,10:21:54.14:1079,54,0	0/0:16,0:16:42.13:0,42,839	0/0:13,0:13:21.07:0,21,425	0/0:10,0:10:24.04:0,24,466	0/0:28,0:28:69.21:0,69,1392	0/0:9,0:9:21.07:0,21,446	0/0:23,0:23:51.18:0,51,1071	0/0:12,0:12:27.09:0,27,561	0/0:16,0:15:33.10:0,33,663	0/0:50,0:50:99:0,117,2313	0/0:38,0:38:90.29:0,90,1751	1/1:10,5:15:27.04:654,27,0	1/1:6,5:11:21.07:632,21,0	1/1:29,7:36:54.08:1271,54,0	0/0:19,0:19:45.14:0,45,917	0/0:12,0:12:30:0,30,551	0/0:26,0:26:66.19:0,66,1287	0/0:19,0:19:39.12:0,39,768	0/0:23,0:23:60.21:0,60,1258	1/1:8,11:19:42.11:1140,42,0	0/0:7,0:7:12.04:0,12,241
chr10	108423091	.	T	TCACA	2325.02	PASS	AB=0.854;AC=17;AF=0.340;AN=50;BaseQRankSum=2.549;DP=670;FS=1.275;HRun=0;HaplotypeScore=149.5265;InbreedingCoeff=0.6697;MQ=60.38;MQ0=11;MQRankSum=-3.482;QD=9.15;ReadPosRankSum=-1.394;VQSLOD=3.0675;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,7:39:14.59:238,15,0	1/1:11,0:11:6.02:102,6,0	./.	./.	0/1:12,0:13:0.43:0,0,122	0/0:22,0:21:21.07:0,21,326	0/0:27,0:27:12.95:0,13,484	1/1:44,0:44:26.37:377,26,0	0/0:23,0:22:33.11:0,33,510	0/0:26,0:26:23.30:0,23,352	0/0:13,0:16:15.04:0,15,193	0/0:24,0:28:38.79:0,39,494	0/0:17,0:17:27.07:0,27,379	0/0:18,0:18:21.04:0,21,299	0/0:20,0:23:44.71:0,45,639	0/0:27,0:30:44.65:0,45,636	1/1:19,13:37:26.83:575,27,0	0/1:13,13:30:16.76:547,0,17	1/1:16,0:15:9.03:147,9,0	1/1:16,0:16:3.01:49,3,0	0/0:32,0:31:0.94:0,1,2	0/1:15,0:15:4.63:5,0,149	0/0:17,0:17:15.03:0,15,211	0/0:38,0:42:54.11:0,54,752	0/0:12,0:18:12.03:0,12,167	0/0:22,0:22:4.70:0,5,140	1/1:32,0:32:27.09:456,27,0	./.
chr10	108423096	.	C	CACACACACACACAT	1384.91	PASS	AB=0.939;AC=7;AF=0.125;AN=56;BaseQRankSum=6.013;DP=710;FS=9.225;HRun=0;HaplotypeScore=274.1487;InbreedingCoeff=-0.1017;MQ=58.39;MQ0=14;MQRankSum=-9.249;QD=6.99;ReadPosRankSum=-1.895;VQSLOD=0.5164;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:32.26:0,32,401	0/1:4,7:16:7:349,0,7	0/0:24,0:12:5.12:0,5,70	0/0:26,0:18:29.93:0,30,288	0/0:19,0:19:44.15:0,44,570	0/0:24,0:23:51.01:0,51,1065	0/0:26,0:26:49.25:0,49,1429	0/1:44,0:44:99:425,0,205	0/0:27,0:26:60.04:0,60,1496	0/0:27,0:27:51.61:0,52,1043	0/0:14,0:14:27:0,27,567	0/0:28,0:27:66.01:0,66,1629	0/0:21,0:21:56.96:0,57,1201	0/0:18,0:18:39.02:0,39,863	0/0:27,0:27:68.68:0,69,1881	0/0:31,0:30:68.68:0,69,1797	0/1:38,0:38:64.12:64,0,354	0/0:29,0:28:50.89:0,51,544	0/1:18,0:17:99:209,0,99	0/1:16,0:16:33.74:34,0,40	0/1:34,0:33:10.26:10,0,45	0/0:19,0:19:27:0,27,470	0/0:17,0:17:38.97:0,39,719	0/0:44,0:44:87.11:0,87,2223	0/0:20,0:20:21.02:0,21,490	0/0:23,0:23:52.29:0,52,741	0/1:32,0:32:64.87:423,0,65	0/0:4,0:4:8.96:0,9,69
chr10	108423102	.	C	CACACACACAT	2257.55	PASS	AB=0.944;AC=7;AF=0.125;AN=56;BaseQRankSum=9.123;DP=713;FS=5.152;HRun=0;HaplotypeScore=217.0077;InbreedingCoeff=0.2181;MQ=54.99;MQ0=14;MQRankSum=-7.078;QD=14.20;ReadPosRankSum=2.812;VQSLOD=2.2533;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:34.88:0,35,386	0/1:13,0:13:28.92:210,0,29	0/0:22,0:10:14.96:0,15,121	0/0:26,0:18:33.05:0,33,351	0/0:19,0:19:50.95:0,51,587	0/0:25,0:24:54:0,54,927	0/0:23,0:23:47.42:0,47,1171	0/1:40,0:40:10.46:631,0,10	0/0:24,0:23:60.06:0,60,1237	0/0:25,0:25:56.76:0,57,972	0/0:13,0:13:26.96:0,27,482	0/0:29,0:28:74.92:0,75,1391	0/0:21,0:21:56.97:0,57,1019	0/0:17,0:17:42.01:0,42,758	0/0:29,0:29:72.03:0,72,1559	0/0:29,0:28:65.71:0,66,1478	0/1:37,0:37:63.63:64,0,179	0/0:30,0:29:22.85:0,23,303	1/1:22,0:21:16.66:673,17,0	0/1:11,6:18:36.23:81,0,36	0/0:39,0:38:1.94:0,2,23	0/0:20,0:20:40.54:0,41,537	0/0:16,0:16:44.95:0,45,664	0/0:45,0:45:96.08:0,96,1900	0/0:24,0:24:38.99:0,39,565	0/0:23,0:23:59.97:0,60,732	0/1:29,0:29:6.01:732,0,6	0/0:6,0:6:11.86:0,12,94
chr10	108423104	.	C	CACACACAT	2297.88	PASS	AB=0.904;AC=10;AF=0.179;AN=56;BaseQRankSum=5.630;DP=714;FS=0.460;HRun=0;HaplotypeScore=177.8607;InbreedingCoeff=0.5235;MQ=54.89;MQ0=14;MQRankSum=-6.476;QD=12.09;ReadPosRankSum=0.872;VQSLOD=2.3755;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:24.87:0,25,348	0/1:13,0:13:47.91:71,0,48	0/0:21,0:8:14.97:0,15,123	0/0:25,0:17:39.05:0,39,405	0/0:20,0:20:53.93:0,54,585	0/0:25,0:24:57:0,57,862	0/0:22,0:22:54.04:0,54,1047	1/1:39,0:39:45.89:496,46,0	0/0:24,0:23:60.06:0,60,1105	0/0:23,0:23:59.83:0,60,928	0/0:13,0:13:26.96:0,27,442	0/0:30,0:29:75.06:0,75,1232	0/0:22,0:22:56.96:0,57,913	0/0:17,0:17:42:0,42,691	0/0:29,0:29:71.88:0,72,1377	0/0:28,0:27:65.96:0,66,1309	0/1:37,0:37:50.79:51,0,158	0/1:31,0:30:59.02:59,0,241	1/1:7,15:23:25.37:798,25,0	1/1:17,0:17:11.61:79,12,0	0/0:18,22:42:3.06:0,3,25	0/0:18,0:18:40.54:0,41,510	0/0:16,0:16:44.96:0,45,613	0/0:46,0:46:99:0,99,1714	0/0:24,0:24:38.99:0,39,521	0/0:24,0:24:59.99:0,60,689	0/1:11,17:29:2.44:904,0,2	0/0:6,0:6:11.86:0,12,94
chr10	108424732	.	GA	G	2117.13	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.282;DP=614;FS=36.715;HRun=3;HaplotypeScore=64.9151;InbreedingCoeff=0.9958;MQ=78.61;MQ0=1;MQRankSum=-4.544;QD=29.40;ReadPosRankSum=-2.935;VQSLOD=0.7045;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.30:0,90,1296	1/1:0,5:5:15.05:186,15,0	0/0:18,0:17:51.17:0,51,715	0/0:19,0:20:39.19:0,39,584	0/0:26,0:26:78.26:0,78,1113	0/0:25,0:25:75.23:0,75,1060	0/0:23,0:23:60.20:0,60,864	1/1:0,13:13:39.12:483,39,0	0/0:26,0:26:75.23:0,75,1044	0/0:29,0:29:87.29:0,87,1253	0/0:19,0:19:57.19:0,57,821	0/0:36,0:36:99:0,108,1518	0/0:26,0:26:75.25:0,75,1080	0/0:19,0:19:51.15:0,51,714	0/0:40,0:40:99:0,117,1633	0/0:21,0:21:63.20:0,63,889	0/0:24,0:24:72.23:0,72,1018	0/0:25,0:25:72.22:0,72,1017	1/1:1,7:8:21.07:260,21,0	1/1:0,12:12:36.11:446,36,0	1/1:3,14:17:39.12:483,39,0	0/0:17,0:17:51.16:0,51,717	0/0:28,0:28:78.25:0,78,1105	0/0:18,0:18:54.18:0,54,778	0/0:28,0:27:81.24:0,81,1129	0/0:32,0:32:90.28:0,90,1263	1/1:2,15:17:36.11:446,36,0	0/0:11,0:11:33.08:0,33,439
chr10	108425196	.	CA	C	721.48	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.417;DP=579;FS=18.210;HRun=5;HaplotypeScore=87.2489;InbreedingCoeff=0.9610;MQ=72.66;MQ0=2;MQRankSum=-2.778;QD=7.84;ReadPosRankSum=-2.409;VQSLOD=-0.3152;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:65.11:0,65,1189	1/1:3,0:3:2.68:12,3,0	0/0:45,1:32:71.77:0,72,724	0/0:42,0:24:25.48:0,25,359	0/0:21,0:21:63.20:0,63,864	0/0:11,0:11:33.11:0,33,460	0/0:11,0:11:33.08:0,33,441	1/1:20,2:22:41.54:305,42,0	0/0:20,0:20:54.18:0,54,750	0/0:18,0:18:51.16:0,51,700	0/0:18,0:18:54.18:0,54,744	0/0:11,0:11:33.10:0,33,445	0/0:23,0:23:69.20:0,69,927	0/0:20,0:20:54.16:0,54,734	0/0:17,0:17:51.17:0,51,714	0/0:20,0:20:60.18:0,60,806	0/0:42,1:43:99:0,104,1644	0/0:42,0:42:99:0,118,1540	1/1:13,2:13:29.16:146,29,0	1/1:15,0:15:25.13:109,25,0	1/1:9,0:9:19.21:76,19,0	0/0:13,0:13:36.12:0,36,504	0/0:12,0:12:36.12:0,36,503	0/0:19,0:19:51.17:0,51,712	0/0:20,0:20:60.20:0,60,839	0/0:16,0:16:35.71:0,36,585	1/1:28,0:28:56.75:252,57,0	0/0:10,0:10:30.10:0,30,419
chr10	108425217	.	C	CA	3233.06	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.829;DP=617;FS=9.075;HRun=3;HaplotypeScore=83.5297;InbreedingCoeff=0.9752;MQ=75.82;MQ0=4;MQRankSum=2.150;QD=34.76;ReadPosRankSum=-2.267;VQSLOD=2.7714;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.22:0,72,861	1/1:0,2:2:6.02:84,6,0	0/0:67,0:36:53.01:0,53,404	0/0:83,0:37:20.34:0,20,368	0/0:28,0:28:81.24:0,81,959	0/0:9,0:9:24.06:0,24,277	0/0:10,0:10:30.08:0,30,346	1/1:0,29:29:90.20:1169,90,0	0/0:16,0:16:42.13:0,42,503	0/0:20,0:20:48.15:0,48,576	0/0:16,0:16:48:0,48,541	0/0:10,0:10:26.98:0,27,293	0/0:17,0:17:48.14:0,48,565	0/0:14,0:14:42.12:0,42,494	0/0:21,0:21:60.17:0,60,704	0/0:19,0:19:57.17:0,57,683	0/0:38,0:38:99:0,107,1228	0/0:34,0:34:66.64:0,67,1067	1/1:3,8:9:24.06:317,24,0	1/1:0,14:14:42.14:576,42,0	1/1:1,8:9:21.03:272,21,0	0/0:14,0:14:39.12:0,39,467	0/0:11,0:11:30.09:0,30,359	0/0:21,0:21:63.18:0,63,744	0/0:18,0:18:51.15:0,51,602	0/0:21,0:21:63.18:0,63,738	1/1:0,27:27:72.24:1001,72,0	0/0:9,0:9:27.07:0,27,311
chr10	108425681	.	G	GCT	350.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.979;DP=506;FS=0.000;HRun=0;HaplotypeScore=62.9937;InbreedingCoeff=0.9506;MQ=60.84;MQ0=6;MQRankSum=0.185;QD=43.86;ReadPosRankSum=-0.020;VQSLOD=5.0233;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.23:0,78,1106	1/1:0,8:8:24.08:444,24,0	0/0:10,0:6:12.02:0,12,127	0/0:10,0:6:14.92:0,15,162	0/0:17,0:17:42.05:0,42,551	0/0:15,0:15:39.13:0,39,573	0/0:25,0:25:72.24:0,72,1056	0/0:12,0:12:36.08:0,36,488	0/0:17,0:17:51.09:0,51,721	0/0:22,0:22:60.20:0,60,882	0/0:16,0:15:45.15:0,45,660	0/0:19,0:19:57.19:0,57,838	0/0:19,0:19:51.14:0,51,709	0/0:19,0:19:57.17:0,57,799	0/0:30,0:30:90.25:0,90,1278	0/0:25,0:25:72.24:0,72,1059	0/0:27,1:28:61.09:0,61,883	0/0:13,0:12:33.11:0,33,485	0/0:17,0:13:39.13:0,39,571	0/0:17,0:17:51.16:0,51,730	0/0:23,0:23:69.21:0,69,976	0/0:14,0:14:39.13:0,39,571	0/0:16,0:16:42.14:0,42,613	0/0:26,0:26:72.19:0,72,1011	0/0:14,0:14:42.11:0,42,578	0/0:17,0:17:48.15:0,48,686	0/0:19,0:19:51.17:0,51,749	0/0:8,0:8:24.08:0,24,351
chr10	108427370	.	AGCGGGGGG	A	3545.31	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=6.187;DP=302;FS=0.620;HRun=0;HaplotypeScore=78.3674;InbreedingCoeff=0.6617;MQ=76.57;MQ0=0;MQRankSum=-7.153;QD=48.57;ReadPosRankSum=5.359;VQSLOD=3.3806;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:0.56:0,1,332	0/0:4,0:4:11.86:0,12,83	0/0:11,0:14:37.18:0,37,844	0/0:14,0:12:29.83:0,30,562	0/0:3,0:3:6:0,6,118	0/0:11,0:11:8.82:0,9,213	0/0:16,0:16:5.65:0,6,411	1/1:0,8:7:14.99:354,15,0	0/0:5,0:5:3.01:0,3,94	0/0:7,0:7:8.98:0,9,77	0/0:5,0:5:3.45:0,3,22	0/0:12,0:12:11.98:0,12,194	0/0:13,0:13:12.04:0,12,286	0/0:16,0:16:23.35:0,23,418	0/0:18,0:18:31.26:0,31,619	0/0:10,0:10:14.98:0,15,334	0/0:17,0:17:26.71:0,27,532	0/1:6,0:6:1.46:1,0,184	1/1:0,16:16:47.31:1083,47,0	1/1:0,9:9:23.94:458,24,0	1/1:0,13:13:9.47:255,9,0	0/0:2,0:2:3.01:0,3,35	0/0:4,0:4:0.47:0,0,1	0/0:19,0:19:21.43:0,21,308	0/0:10,0:10:9.50:0,10,180	0/0:10,0:11:26.91:0,27,265	1/1:1,20:21:51.12:1394,51,0	./.
chr10	108427467	.	CACAT	C	1094.42	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.260;DP=579;FS=0.748;HRun=0;HaplotypeScore=105.7572;InbreedingCoeff=0.9139;MQ=62.01;MQ0=14;MQRankSum=-7.438;QD=12.88;ReadPosRankSum=-4.431;VQSLOD=1.6988;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:74.47:0,74,1822	0/0:12,0:12:9.03:0,9,235	0/0:31,1:15:42.14:0,42,1011	0/0:35,0:24:9.56:0,10,968	0/0:18,0:18:51.18:0,51,1342	0/0:21,0:21:60.21:0,60,1606	0/0:24,0:24:61.57:0,62,1683	1/1:14,9:22:39.14:606,39,0	0/0:17,0:17:51.09:0,51,1271	0/0:19,0:18:53.21:0,53,1305	0/0:13,0:13:36.11:0,36,913	0/0:28,0:28:82.51:0,83,2001	0/0:18,0:18:39.18:0,39,1275	0/0:18,0:18:49.05:0,49,1211	0/0:24,0:24:63.22:0,63,1649	0/0:17,0:17:48.16:0,48,1291	0/0:23,0:21:54.14:0,54,1252	0/0:21,0:21:47.83:0,48,1120	1/1:14,3:14:16.39:397,16,0	1/1:15,1:14:5.81:70,6,0	1/1:18,1:15:8.94:98,9,0	0/0:19,0:18:51.17:0,51,1367	0/0:8,0:8:19.86:0,20,383	0/0:59,0:58:99:0,159,4104	0/0:16,0:16:48.15:0,48,1159	0/0:12,0:12:32.97:0,33,780	1/1:10,0:8:9.50:84,10,0	0/0:5,0:5:15.05:0,15,409
chr10	108427468	.	A	AC	333.46	PASS	AB=0.972;AC=8;AF=0.143;AN=56;BaseQRankSum=7.976;DP=588;FS=1.712;HRun=1;HaplotypeScore=84.1395;InbreedingCoeff=0.5528;MQ=61.84;MQ0=14;MQRankSum=-6.232;QD=3.92;ReadPosRankSum=-2.434;VQSLOD=-0.6058;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:80.60:0,81,1003	0/0:12,0:12:9.03:0,9,113	0/0:32,0:15:42.13:0,42,533	0/0:35,0:25:27.30:0,27,564	0/0:18,0:18:51.17:0,51,661	0/0:21,0:21:60.20:0,60,779	0/0:24,0:24:63.68:0,64,819	0/1:21,0:20:79.45:94,0,79	0/0:17,0:17:51.17:0,51,661	0/0:20,0:19:54.17:0,54,689	0/0:13,0:13:36.12:0,36,467	0/0:28,0:28:81.26:0,81,1046	0/0:18,0:18:54.17:0,54,695	0/0:18,0:18:51.17:0,51,660	0/0:24,0:24:63.20:0,63,818	0/0:18,0:18:48.63:0,49,623	0/0:23,0:21:54.17:0,54,686	0/0:21,0:21:44.73:0,45,584	0/1:16,1:14:67.65:141,0,68	1/1:13,3:14:5.96:46,6,0	1/1:15,6:17:8.28:49,8,0	0/0:19,0:18:51.17:0,51,662	0/0:8,0:8:21.05:0,21,253	0/0:63,0:62:99:0,160,2061	0/0:17,0:17:48.13:0,48,606	0/0:13,0:13:33.11:0,33,427	1/1:5,5:8:1.82:135,2,0	0/0:5,0:5:15.05:0,15,195
chr10	108427470	.	ATAC	A	713.14	PASS	AB=0.927;AC=10;AF=0.179;AN=56;BaseQRankSum=7.967;DP=587;FS=1.530;HRun=0;HaplotypeScore=98.5264;InbreedingCoeff=0.6446;MQ=58.51;MQ0=14;MQRankSum=-6.711;QD=6.31;ReadPosRankSum=-4.722;VQSLOD=0.5497;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:78.17:0,78,1398	0/0:8,3:11:9.03:0,9,180	0/0:33,0:14:42.14:0,42,805	0/1:30,3:22:28.95:29,0,807	0/0:18,0:18:51.18:0,51,1180	0/0:21,0:21:60.19:0,60,1321	0/0:24,0:24:64.67:0,65,1441	1/1:12,7:18:47.92:461,48,0	0/0:18,0:18:54.18:0,54,1192	0/0:20,0:19:57.19:0,57,1259	0/0:13,0:13:36.12:0,36,808	0/0:30,0:30:90.17:0,90,1865	0/0:18,0:18:54.17:0,54,1180	0/0:18,0:18:51.15:0,51,1015	0/0:24,0:24:63.06:0,63,1367	0/0:19,0:19:54.19:0,54,1235	0/0:22,1:21:45.51:0,46,986	0/0:21,0:21:47.62:0,48,868	0/1:14,1:12:14.60:134,0,15	1/1:12,2:13:2.84:33,3,0	1/1:19,0:15:2.94:18,3,0	0/0:19,0:18:54.18:0,54,1184	0/0:7,0:7:18.95:0,19,414	0/0:65,0:64:99:0,154,3807	0/0:17,0:17:51.17:0,51,1111	0/0:14,0:14:35.71:0,36,772	1/1:11,1:10:23.09:191,23,0	0/0:5,0:5:15.05:0,15,347
chr10	108427473	.	C	CCA	1399.84	PASS	AB=0.791;AC=17;AF=0.304;AN=56;BaseQRankSum=-1.927;DP=606;FS=3.077;HRun=0;HaplotypeScore=89.2627;InbreedingCoeff=0.3492;MQ=58.13;MQ0=14;MQRankSum=-0.584;QD=5.51;ReadPosRankSum=-1.452;VQSLOD=2.7167;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,11:35:91.05:376,0,91	1/1:10,0:11:3.01:40,3,0	0/0:34,0:13:3.01:0,3,34	0/1:35,0:22:15:15,0,28	0/0:17,0:17:30.06:0,30,327	0/0:21,0:22:38.93:0,39,417	0/0:23,0:24:35.90:0,36,373	1/1:18,0:17:7.35:42,7,0	0/0:17,0:18:41.92:0,42,441	0/0:18,0:19:44.80:0,45,476	0/0:12,0:13:20.89:0,21,221	0/0:27,1:30:25.44:0,25,697	0/0:19,0:19:42.57:0,43,465	0/1:14,1:18:16.77:17,0,221	0/0:19,0:24:50.62:0,51,507	0/1:19,1:20:7.52:8,0,374	0/1:13,12:25:95.74:422,0,96	0/1:7,13:22:24.95:385,0,25	1/1:17,0:15:7.22:67,7,0	1/1:13,0:14:5.90:41,6,0	0/1:9,0:17:0:0,0,0	0/0:18,0:19:29.74:0,30,295	0/0:8,0:8:21.04:0,21,226	0/0:58,1:65:9.18:0,9,1176	0/0:17,0:18:32.93:0,33,359	0/0:13,0:14:20.89:0,21,221	1/1:7,0:10:17.92:155,18,0	0/0:5,0:5:9.03:0,9,103
chr10	108427597	.	AG	A	5134.27	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.878;DP=728;FS=17.833;HRun=1;HaplotypeScore=83.0965;InbreedingCoeff=0.9999;MQ=79.90;MQ0=1;MQRankSum=-0.447;QD=38.60;ReadPosRankSum=-0.385;VQSLOD=2.9661;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:66:99:0,196,3020	0/0:12,0:12:33.11:0,33,522	0/0:30,0:30:87.27:0,87,1334	0/0:16,0:16:44.26:0,44,653	0/0:17,0:17:51.15:0,51,769	0/0:26,0:26:75.24:0,75,1172	0/0:34,0:34:99:0,102,1607	1/1:0,20:19:57.18:781,57,0	0/0:21,0:21:60.20:0,60,948	0/0:25,0:25:75.25:0,75,1175	0/0:15,0:15:41.85:0,42,648	0/0:28,0:28:81.26:0,81,1255	0/0:24,0:24:72.25:0,72,1150	0/0:28,0:28:81.26:0,81,1266	0/0:31,0:31:84.29:0,84,1343	0/0:24,0:24:72.23:0,72,1126	0/0:37,0:37:99:0,108,1693	0/0:20,0:20:60.20:0,60,957	1/1:0,24:24:72.19:956,72,0	1/1:0,16:16:39.13:544,39,0	1/1:0,51:51:99:1972,141,0	0/0:18,0:18:51.15:0,51,770	0/0:16,0:16:45.15:0,45,717	0/0:41,0:41:99:0,120,1890	0/0:21,0:21:63.21:0,63,1007	0/0:31,0:31:90.30:0,90,1418	1/1:0,22:22:63.21:881,63,0	0/0:13,0:13:39.13:0,39,623
chr10	108428297	.	T	TG	3731.88	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-3.920;DP=641;FS=3.024;HRun=3;HaplotypeScore=65.2077;InbreedingCoeff=0.9987;MQ=81.44;MQ0=0;MQRankSum=-4.197;QD=35.54;ReadPosRankSum=-2.058;VQSLOD=3.4911;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1438	0/0:9,0:9:27.08:0,27,319	0/0:18,0:17:44.45:0,44,506	0/0:19,0:20:32.05:0,32,389	0/0:22,0:22:63.19:0,63,756	0/0:23,0:23:66.19:0,66,781	0/0:26,0:26:75.23:0,75,899	1/1:2,21:23:63.18:846,63,0	0/0:24,0:24:66.19:0,66,780	0/0:22,0:22:63.19:0,63,756	0/0:17,0:17:51.16:0,51,611	0/0:33,0:33:99:0,99,1161	0/0:14,0:14:39.12:0,39,465	0/0:31,0:31:81.18:0,81,932	0/0:39,0:39:99:0,114,1332	0/0:27,0:27:78.21:0,78,912	0/0:29,0:29:84.23:0,84,993	0/0:17,0:17:45.10:0,45,523	1/1:3,7:10:21.07:290,21,0	1/1:3,21:24:54.18:756,54,0	1/1:3,25:28:75.14:1002,75,0	0/0:20,0:20:60.17:0,60,709	0/0:13,0:13:39.11:0,39,456	0/0:22,0:22:66.18:0,66,778	0/0:20,0:20:54.16:0,54,647	0/0:32,0:32:90.25:0,90,1058	1/1:0,20:20:60.20:839,60,0	0/0:16,0:16:39.09:0,39,453
chr10	108429790	.	CG	C	515.77	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=3.596;DP=404;FS=0.711;HRun=2;HaplotypeScore=45.5674;InbreedingCoeff=0.8451;MQ=38.21;MQ0=82;MQRankSum=-3.095;QD=8.32;ReadPosRankSum=-1.186;VQSLOD=0.5582;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:16:25.04:0,25,197	./.	0/0:13,0:1:2.98:0,3,21	./.	0/0:16,0:14:26.90:0,27,217	0/0:8,0:8:15:0,15,132	0/0:17,0:14:31.19:0,31,224	1/1:12,0:10:23.80:169,24,0	0/0:9,0:7:14.59:0,15,96	0/0:13,0:9:20.67:0,21,164	0/0:11,0:7:11.03:0,11,82	0/0:16,0:15:38.54:0,39,286	0/0:12,0:8:14.31:0,14,101	0/0:6,0:4:5.99:0,6,50	0/0:16,0:16:30.13:0,30,232	0/0:12,0:12:32.77:0,33,263	0/0:29,0:23:54.40:0,54,510	0/0:18,0:13:6.82:0,7,211	1/1:15,0:11:29.76:212,30,0	1/1:1,9:11:5.95:42,6,0	1/1:10,0:8:8.71:60,9,0	0/0:16,0:15:19.16:0,19,143	0/0:15,0:14:20.95:0,21,182	0/0:29,0:20:14.44:0,14,224	0/0:15,0:12:20.91:0,21,173	0/0:15,0:11:29.97:0,30,293	1/1:14,0:9:26.58:192,27,0	0/0:13,0:8:15.79:0,16,140
chr10	108429868	.	CGT	C	510.75	PASS	AB=0.915;AC=15;AF=0.313;AN=48;BaseQRankSum=0.683;DP=448;FS=0.743;HRun=0;HaplotypeScore=76.7985;InbreedingCoeff=-0.1569;MQ=66.20;MQ0=12;MQRankSum=-0.460;QD=3.27;ReadPosRankSum=1.338;VQSLOD=1.4098;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:27.04:0,27,343	1/1:2,1:3:3.01:32,3,0	./.	./.	0/1:14,0:14:17.27:17,0,154	0/1:8,3:11:52.61:53,0,77	0/0:29,0:29:6.89:0,7,245	./.	0/1:12,0:13:27.76:28,0,113	./.	0/1:7,2:8:14.50:14,0,150	1/1:7,5:14:26.73:254,27,0	0/1:10,0:9:22.56:23,0,38	0/1:10,1:11:20.30:20,0,100	0/1:10,2:13:48.69:49,0,280	0/1:16,0:16:51.71:52,0,219	0/0:14,0:30:29.99:0,30,261	0/1:12,4:16:63.87:64,0,300	0/0:19,0:18:20.97:0,21,237	0/0:9,0:9:9.02:0,9,114	0/0:29,0:28:24:0,24,280	0/1:13,0:13:14.55:15,0,78	0/0:8,0:8:6.02:0,6,88	0/0:19,1:34:15.73:0,16,451	0/1:13,0:12:39.97:40,0,207	0/0:13,0:13:7.26:0,7,74	0/0:11,0:13:6.68:0,7,251	0/0:8,0:8:15.05:0,15,210
chr10	108429914	.	TGC	T	1087.99	PASS	AB=0.994;AC=10;AF=0.179;AN=56;BaseQRankSum=1.567;DP=523;FS=3.322;HRun=0;HaplotypeScore=85.0748;InbreedingCoeff=0.0686;MQ=67.94;MQ0=10;MQRankSum=0.983;QD=7.45;ReadPosRankSum=-0.977;VQSLOD=3.2028;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:31:75.02:0,75,775	0/1:3,0:3:8.54:9,0,17	0/0:23,0:16:40.79:0,41,376	0/0:29,0:20:46.77:0,47,427	0/0:12,0:12:24.03:0,24,363	0/0:15,0:14:21.38:0,21,315	0/0:32,0:30:55.86:0,56,708	1/1:5,12:16:43.34:359,43,0	0/0:12,0:12:26.04:0,26,270	0/0:9,0:9:27.01:0,27,247	0/0:12,0:12:10.97:0,11,285	0/1:16,0:16:30.66:31,0,114	0/1:7,0:6:5.24:5,0,111	0/0:8,0:8:11.15:0,11,219	0/0:21,0:21:37.36:0,37,627	0/0:20,0:20:42.46:0,42,568	0/0:29,0:28:59.79:0,60,629	0/0:25,0:24:44.20:0,44,665	0/1:16,0:14:69.13:126,0,69	0/1:15,0:15:17.72:138,0,18	0/1:40,0:40:10.83:405,0,11	0/1:13,0:13:4.46:4,0,287	0/0:8,0:8:22.24:0,22,214	0/0:50,0:51:99:0,105,1224	0/0:19,0:18:27.32:0,27,504	0/0:11,0:11:27.87:0,28,261	0/1:18,1:19:33.54:155,0,34	0/0:7,0:7:21.04:0,21,298
chr10	108430090	.	G	GC	4130.63	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-0.755;DP=527;FS=7.335;HRun=9;HaplotypeScore=58.9491;InbreedingCoeff=0.9829;MQ=78.45;MQ0=0;MQRankSum=-1.663;QD=17.43;ReadPosRankSum=-0.789;VQSLOD=3.2263;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,5:37:60.32:377,60,0	1/1:8,0:8:23.62:151,24,0	0/0:16,0:16:35.64:0,36,289	0/0:22,0:21:10.99:0,11,222	0/0:13,0:13:35.44:0,35,295	1/1:0,16:17:51.07:546,51,0	1/1:4,19:23:51.03:547,51,0	1/1:13,7:20:18.02:181,18,0	0/0:19,1:20:17.78:0,18,375	0/0:22,0:22:56.97:0,57,495	0/0:12,0:12:29.90:0,30,246	0/0:22,0:22:53.98:0,54,469	0/0:18,0:18:44.99:0,45,391	0/0:12,0:12:32.98:0,33,283	0/0:31,0:31:83.98:0,84,729	0/0:24,0:24:62.92:0,63,537	1/1:3,7:40:88.73:516,89,0	1/1:7,1:20:28.58:161,29,0	1/1:3,10:13:30.08:332,30,0	1/1:2,6:8:15.04:165,15,0	1/1:5,27:32:60.16:664,60,0	0/0:8,0:8:21:0,21,182	0/0:9,0:9:17.99:0,18,156	0/0:26,0:26:59.95:0,60,521	0/0:11,0:11:32.87:0,33,275	0/0:19,0:19:47.97:0,48,413	1/1:4,13:19:47.79:490,48,0	0/0:5,0:5:11.97:0,12,100
chr10	108430096	.	C	CT	603.22	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=7.809;DP=530;FS=0.837;HRun=0;HaplotypeScore=72.7209;InbreedingCoeff=0.1609;MQ=80.71;MQ0=0;MQRankSum=-2.266;QD=4.68;ReadPosRankSum=3.790;VQSLOD=2.8781;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:37.54:0,38,323	1/1:1,8:9:24.08:343,24,0	0/0:17,0:17:48.10:0,48,588	0/0:23,0:22:53.15:0,53,615	0/0:14,0:14:38.78:0,39,512	0/1:20,0:20:31.19:107,0,31	0/1:24,0:24:68.24:68,0,82	0/0:19,0:19:18.43:0,18,249	0/0:17,0:17:43.18:0,43,661	0/0:26,0:26:73.93:0,74,911	0/0:12,0:12:30.10:0,30,408	0/0:19,0:19:54.18:0,54,753	0/0:15,0:15:45.15:0,45,627	0/0:14,0:14:42.11:0,42,538	0/0:29,0:29:87.22:0,87,1190	0/0:23,0:23:68.03:0,68,901	0/0:40,0:40:60.18:0,60,487	0/0:19,0:19:30.88:0,31,217	0/1:15,0:15:32.02:32,0,48	0/1:10,0:10:6.79:29,0,7	0/1:32,0:32:68.38:83,0,68	0/0:8,0:8:21.07:0,21,291	0/0:8,0:8:21.01:0,21,261	0/0:30,0:30:90.16:0,90,1090	0/0:13,0:13:39.11:0,39,509	0/0:16,0:16:48.16:0,48,667	0/1:19,0:19:53.67:83,0,54	0/0:6,0:6:15.04:0,15,192
chr10	108430194	.	AGAAGTTTAT	A	166.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.853;DP=618;FS=0.000;HRun=0;HaplotypeScore=172.5336;InbreedingCoeff=0.9677;MQ=82.89;MQ0=0;MQRankSum=-2.286;QD=41.63;ReadPosRankSum=1.180;VQSLOD=3.2326;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,154,7585	1/1:0,4:4:12.04:252,12,0	0/0:21,0:20:60.03:0,60,2441	0/0:25,0:25:64.70:0,65,2670	0/0:21,0:21:63.22:0,63,3141	0/0:10,0:10:30.10:0,30,1504	0/0:25,0:25:75.26:0,75,3605	0/0:28,0:28:84.28:0,84,3991	0/0:17,0:17:51.18:0,51,2583	0/0:20,0:20:60.20:0,60,2873	0/0:13,0:13:36.59:0,37,1637	0/0:37,0:37:99:0,111,5490	0/0:23,0:23:69.24:0,69,3483	0/0:15,0:15:45.15:0,45,2164	0/0:27,0:27:81.28:0,81,4022	0/0:33,0:33:99:0,99,4781	0/0:26,0:26:78.25:0,78,3673	0/0:15,0:15:45.15:0,45,2063	0/0:22,0:22:66.23:0,66,3147	0/0:14,0:14:39.13:0,39,1973	0/0:32,0:32:96.16:0,96,4636	0/0:21,0:21:60.21:0,60,2924	0/0:14,0:14:42.14:0,42,1953	0/0:32,0:32:94.18:0,94,4392	0/0:22,0:22:60.21:0,60,3033	0/0:23,0:23:69.24:0,69,3397	0/0:12,0:12:36.12:0,36,1769	0/0:15,0:15:45.15:0,45,2277
chr10	108430204	.	CCTTGT	C	101.61	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.449;DP=629;FS=0.000;HRun=0;HaplotypeScore=122.9526;InbreedingCoeff=0.9682;MQ=83.48;MQ0=0;MQRankSum=-3.390;QD=25.40;ReadPosRankSum=1.752;VQSLOD=3.4560;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,162,4930	1/1:0,4:4:12.04:188,12,0	0/0:24,0:23:69.23:0,69,2004	0/0:22,0:22:66.22:0,66,1823	0/0:23,0:23:69.17:0,69,2164	0/0:12,0:12:36.09:0,36,939	0/0:30,0:30:90.31:0,90,2869	0/0:29,0:29:87.29:0,87,2716	0/0:21,0:21:63.22:0,63,2040	0/0:20,0:20:60.20:0,60,1866	0/0:16,0:16:42.62:0,43,1383	0/0:38,0:38:99:0,114,3549	0/0:24,0:24:69.24:0,69,2278	0/0:15,0:15:45.14:0,45,1406	0/0:28,0:28:84.28:0,84,2725	0/0:31,0:31:93.32:0,93,2978	0/0:23,0:23:69.23:0,69,2223	0/0:16,0:16:48.12:0,48,1519	0/0:22,0:22:66.15:0,66,1891	0/0:14,0:14:42.14:0,42,1397	0/0:31,0:31:93.23:0,93,2805	0/0:21,0:21:60.12:0,60,1757	0/0:14,0:14:42.14:0,42,1372	0/0:26,0:26:75.72:0,76,2336	0/0:20,0:20:60.21:0,60,1975	0/0:24,0:24:72.25:0,72,2339	0/0:12,0:12:36.12:0,36,1199	0/0:15,0:15:45.15:0,45,1498
chr10	108431032	.	A	AAGGAGG	1627.54	PASS	AB=0.984;AC=15;AF=0.268;AN=56;BaseQRankSum=0.160;DP=392;FS=1.188;HRun=0;HaplotypeScore=157.9543;InbreedingCoeff=-0.2098;MQ=53.00;MQ0=26;MQRankSum=-0.962;QD=6.19;ReadPosRankSum=-2.354;VQSLOD=2.2470;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:99:140,0,141	0/0:1,0:1:2.92:0,3,17	0/1:25,0:6:26.28:26,0,42	0/1:30,0:11:6.95:7,0,93	0/0:8,0:8:4.78:0,5,347	0/0:12,0:12:28.28:0,28,439	0/1:30,0:27:42.94:43,0,494	0/1:34,0:33:99:516,0,149	0/1:19,0:18:24.94:25,0,553	0/0:16,0:13:34.31:0,34,603	0/0:4,0:4:5.94:0,6,95	0/0:7,0:7:2.13:0,2,193	0/1:10,0:9:14.96:15,0,252	0/0:8,0:8:14.93:0,15,188	0/1:21,0:19:1.59:2,0,295	0/0:15,0:14:19.60:0,20,366	0/0:10,0:9:19.75:0,20,188	0/1:11,0:9:4.70:5,0,88	0/1:8,2:9:99:251,0,130	1/1:3,4:9:14.97:286,15,0	0/1:24,1:22:99:239,0,101	0/0:5,0:4:7.52:0,8,61	0/1:13,0:13:39.23:39,0,249	0/0:17,0:13:3.97:0,4,167	0/0:10,0:8:18.53:0,19,420	0/0:8,0:7:21.04:0,21,407	0/1:7,0:7:10.81:186,0,11	0/0:8,0:8:23.95:0,24,416
chr10	108432057	.	GC	G	620.31	PASS	AB=0.943;AC=11;AF=0.196;AN=56;BaseQRankSum=5.995;DP=508;FS=1.638;HRun=9;HaplotypeScore=77.9811;InbreedingCoeff=0.7558;MQ=77.49;MQ0=6;MQRankSum=0.860;QD=5.35;ReadPosRankSum=1.004;VQSLOD=0.9899;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,2:33:17.34:17,0,149	0/0:3,0:3:2.98:0,3,22	0/0:66,0:26:21.37:0,21,246	0/0:62,1:34:18.56:0,19,282	0/0:7,0:7:17.96:0,18,161	0/0:23,0:23:20.54:0,21,434	0/0:12,0:13:38.91:0,39,416	1/1:18,0:18:21.44:124,21,0	0/0:9,0:9:21.05:0,21,231	0/0:6,0:7:17.98:0,18,182	0/0:3,0:3:9.03:0,9,103	0/0:9,0:9:20.98:0,21,192	0/0:7,0:7:17.90:0,18,173	0/0:13,0:13:5.84:0,6,279	0/0:13,0:13:36.06:0,36,379	0/0:14,0:14:32.99:0,33,334	0/0:50,0:50:12.76:0,13,348	0/0:25,0:25:27.33:0,27,175	1/1:14,2:16:38.26:188,38,0	1/1:9,1:10:1.72:55,2,0	1/1:17,3:20:31.86:182,32,0	0/0:6,0:6:18:0,18,176	0/0:10,0:10:20.97:0,21,217	0/0:13,0:13:29.98:0,30,302	0/0:11,0:11:29.96:0,30,276	0/0:13,0:13:27:0,27,267	1/1:17,2:19:42.49:221,42,0	0/0:11,0:11:30.04:0,30,307
chr10	108432065	.	CCG	C	1809.10	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=1.573;DP=527;FS=0.000;HRun=0;HaplotypeScore=85.7268;InbreedingCoeff=0.8323;MQ=78.44;MQ0=7;MQRankSum=3.485;QD=19.88;ReadPosRankSum=-0.410;VQSLOD=3.1030;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:73.59:0,74,705	0/1:3,0:3:13.28:13,0,16	0/0:68,0:25:30.98:0,31,404	0/0:73,0:40:4.76:0,5,395	0/0:7,0:7:21.04:0,21,259	0/0:18,0:18:53.28:0,53,770	0/0:15,0:15:45.07:0,45,720	1/1:6,16:22:33.03:320,33,0	0/0:9,0:9:27.01:0,27,426	0/0:8,0:8:24.07:0,24,365	0/0:6,0:6:18.04:0,18,240	0/0:8,0:8:23.96:0,24,253	0/0:7,0:7:21:0,21,286	0/0:12,0:12:35.28:0,35,500	0/0:15,0:15:43.30:0,43,629	0/0:16,0:16:42:0,42,569	0/0:50,0:51:93.99:0,94,1083	0/0:24,0:24:42.93:0,43,504	1/1:3,14:17:47.42:443,47,0	1/1:4,5:9:4.98:155,5,0	1/1:5,14:19:25.19:421,25,0	0/0:7,0:7:21.04:0,21,289	0/0:9,0:9:21.48:0,21,301	0/0:10,0:10:29.99:0,30,452	0/0:13,0:13:35.98:0,36,429	0/0:11,0:11:29.99:0,30,422	1/1:2,19:21:45.15:628,45,0	0/0:11,0:11:33.04:0,33,461
chr10	108432441	.	C	CCCCCG	592.77	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=5.880;DP=386;FS=4.174;HRun=0;HaplotypeScore=99.4765;InbreedingCoeff=0.5584;MQ=71.64;MQ0=0;MQRankSum=-3.783;QD=3.37;ReadPosRankSum=-4.610;VQSLOD=0.4054;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,6:15:1.54:4,2,0	1/1:6,0:6:8.99:76,9,0	0/0:6,0:6:8.22:0,8,148	0/1:11,0:11:21:21,0,148	0/0:3,0:3:9:0,9,114	0/0:14,0:14:6.04:0,6,374	0/0:24,0:24:63.05:0,63,917	1/1:6,0:13:13.98:109,14,0	0/0:19,0:19:33.85:0,34,518	0/1:6,0:6:5.03:5,0,68	0/0:6,0:6:11.91:0,12,153	0/0:22,0:22:32.70:0,33,516	0/0:17,0:17:9.98:0,10,411	0/0:17,0:17:26.39:0,26,534	0/0:15,0:15:30.89:0,31,543	0/0:21,0:21:36.47:0,36,994	1/1:10,0:21:7.71:54,8,0	1/1:10,4:25:6.02:147,6,0	1/1:5,0:9:14.63:94,15,0	0/1:6,0:6:2.33:41,0,2	1/1:12,0:35:6.07:50,6,0	0/1:3,0:3:0:0,0,0	0/1:6,0:6:7.79:8,0,153	0/0:28,0:28:68.05:0,68,963	0/0:6,0:6:5.91:0,6,92	0/0:12,0:12:9.66:0,10,142	1/1:2,0:12:14.61:149,15,0	1/1:7,0:7:2.88:15,3,0
chr10	108433793	.	T	TC	7566.47	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=16.240;DP=635;FS=8.208;HRun=4;HaplotypeScore=89.2500;InbreedingCoeff=0.9951;MQ=83.33;MQ0=0;MQRankSum=-6.833;QD=36.73;ReadPosRankSum=-0.316;VQSLOD=4.3455;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,42:46:99:1592,117,0	1/1:0,5:5:12.04:163,12,0	0/0:20,0:20:48.10:0,48,524	0/0:22,0:22:57.08:0,57,604	0/0:22,0:22:57.14:0,57,635	0/0:18,0:18:51.15:0,51,578	0/0:16,0:16:39.09:0,39,431	1/1:2,26:28:78.23:1044,78,0	0/0:27,0:27:78.22:0,78,884	0/0:25,0:25:69.20:0,69,781	0/0:23,0:23:69.20:0,69,782	0/0:18,0:18:51.14:0,51,579	0/0:13,0:13:39.11:0,39,442	0/0:25,0:25:69.18:0,69,773	0/0:21,0:21:63.18:0,63,714	0/0:24,0:24:69.17:0,69,765	1/1:2,30:32:87.29:1189,87,0	1/1:1,18:19:56.92:750,57,0	1/1:1,19:20:60.17:799,60,0	1/1:0,15:15:45.11:594,45,0	1/1:1,28:29:75.25:1026,75,0	0/0:15,0:15:45.03:0,45,482	0/0:24,0:24:63.18:0,63,712	0/0:40,0:40:99:0,111,1231	0/0:27,0:27:72.21:0,72,817	0/0:28,0:28:84.23:0,84,943	1/1:1,11:12:30.10:410,30,0	0/0:21,0:21:63.18:0,63,714
chr10	108434244	.	ACCCC	A	1728.22	PASS	AB=0.875;AC=9;AF=0.161;AN=56;BaseQRankSum=0.618;DP=240;FS=17.783;HRun=12;HaplotypeScore=47.6939;InbreedingCoeff=0.6328;MQ=71.62;MQ0=0;MQRankSum=-2.127;QD=23.35;ReadPosRankSum=5.241;VQSLOD=0.2893;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,18:27:46.33:683,46,0	1/1:1,9:10:27.08:408,27,0	0/0:6,0:6:10.85:0,11,137	0/1:6,0:7:5.99:6,0,117	0/0:6,0:6:12.04:0,12,253	0/0:7,0:9:15.03:0,15,227	0/0:10,0:10:21.54:0,22,480	0/0:10,0:13:11.70:0,12,69	0/0:3,0:3:3.01:0,3,74	0/0:5,0:6:8.78:0,9,111	0/0:5,0:6:12.03:0,12,179	0/0:5,0:5:3.01:0,3,74	0/0:3,0:3:6.02:0,6,134	0/0:1,0:1:3.01:0,3,74	0/0:11,0:11:24.08:0,24,493	0/0:7,0:7:15.05:0,15,355	1/1:4,10:14:24.03:339,24,0	1/1:2,14:16:27.19:449,27,0	0/0:5,0:10:11.81:0,12,77	0/0:5,0:9:17.62:0,18,112	0/0:5,0:15:25.91:0,26,156	0/0:3,0:3:6.02:0,6,143	0/0:6,0:6:9.82:0,10,119	0/0:9,0:10:18.06:0,18,429	0/0:10,0:10:12.04:0,12,238	0/0:5,0:6:12.03:0,12,185	0/0:5,0:9:17.70:0,18,139	0/0:2,0:2:3.01:0,3,73
chr10	108436518	.	GAGAGAC	G	1308.37	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.468;DP=682;FS=1.362;HRun=0;HaplotypeScore=149.3718;InbreedingCoeff=0.8767;MQ=61.39;MQ0=10;MQRankSum=-0.052;QD=17.68;ReadPosRankSum=-3.278;VQSLOD=2.3124;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:69.12:0,69,1948	0/0:9,0:9:24.08:0,24,681	0/0:48,0:19:14.92:0,15,208	0/0:66,0:31:9.95:0,10,561	0/0:25,0:25:51.16:0,51,1493	0/0:20,0:20:39.13:0,39,1152	0/0:30,0:30:59.75:0,60,1387	1/1:5,20:25:60:838,60,0	0/0:24,0:24:57.17:0,57,1591	0/0:24,0:24:51.12:0,51,1248	0/0:13,0:13:30.10:0,30,817	0/0:35,0:35:75.22:0,75,2263	0/0:26,0:26:63.21:0,63,1757	0/0:28,0:27:60.19:0,60,1612	0/0:25,0:24:42.13:0,42,1077	0/0:17,0:16:30.08:0,30,835	0/0:39,0:39:99:0,102,2629	0/0:17,0:17:30.07:0,30,826	1/1:7,8:14:23.98:327,24,0	1/1:2,5:7:5.97:82,6,0	1/1:18,2:19:9.03:154,9,0	0/0:19,0:18:39.13:0,39,913	0/0:10,0:10:6.91:0,7,184	0/0:53,0:52:99:0,115,3218	0/0:10,0:10:21.07:0,21,621	0/0:21,0:21:57.15:0,57,1420	1/1:5,2:7:3.01:64,3,0	0/0:6,0:6:15.05:0,15,387
chr10	108436897	.	GA	G	1247.65	PASS	AB=0.777;AC=10;AF=0.179;AN=56;BaseQRankSum=8.936;DP=589;FS=16.984;HRun=11;HaplotypeScore=67.4220;InbreedingCoeff=0.7244;MQ=56.53;MQ0=4;MQRankSum=-2.798;QD=11.66;ReadPosRankSum=-1.609;VQSLOD=1.1032;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,1:44:77.44:0,77,1006	0/0:10,0:10:24.06:0,24,256	0/0:5,0:3:8.98:0,9,84	0/1:10,1:9:34.51:35,0,55	0/0:21,0:22:50.95:0,51,517	0/0:16,0:19:47.95:0,48,494	0/0:26,1:27:41.60:0,42,631	1/1:6,28:33:48.28:527,48,0	0/0:20,0:20:54.09:0,54,553	0/0:25,0:24:45.08:0,45,469	0/0:20,0:22:50.91:0,51,506	0/0:16,0:16:33.08:0,33,345	0/0:16,1:17:14.78:0,15,342	0/0:20,0:20:57.08:0,57,584	0/0:28,2:31:57.65:0,58,777	0/0:16,0:17:35.95:0,36,360	0/0:38,0:38:81.19:0,81,856	0/0:23,0:23:56.98:0,57,590	1/1:7,14:20:9.73:277,10,0	1/1:3,15:17:43.93:344,44,0	0/1:3,4:7:35.24:59,0,35	0/0:15,0:15:27.06:0,27,281	0/0:14,0:14:33.06:0,33,338	0/0:34,2:35:37.85:0,38,779	0/0:16,1:17:17.29:0,17,368	0/0:31,0:30:73.72:0,74,757	1/1:3,13:15:20.48:172,20,0	0/0:12,0:12:30.08:0,30,319
chr10	108438105	.	CG	C	2321.96	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=10.045;DP=359;FS=0.480;HRun=8;HaplotypeScore=45.0659;InbreedingCoeff=0.9731;MQ=83.82;MQ0=0;MQRankSum=-2.865;QD=14.98;ReadPosRankSum=2.969;VQSLOD=3.1248;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:63.10:608,63,0	1/1:0,3:3:8.97:77,9,0	0/0:12,0:12:33.04:0,33,348	0/0:12,0:12:26.64:0,27,264	0/0:9,0:9:24.06:0,24,278	0/0:10,0:10:27.07:0,27,315	0/0:11,0:11:33.06:0,33,373	1/1:3,0:10:13.08:46,13,0	0/0:12,0:12:36.08:0,36,411	0/0:9,0:9:21.06:0,21,253	0/0:13,0:13:33.10:0,33,398	0/0:15,0:15:39.09:0,39,444	0/0:11,0:11:30.05:0,30,327	0/0:8,0:8:24.06:0,24,277	0/0:13,0:13:30.08:0,30,352	0/0:12,0:12:36.11:0,36,435	1/1:1,32:33:84.14:811,84,0	1/1:0,25:25:69.11:666,69,0	1/1:2,0:13:22.40:67,22,0	1/1:1,0:10:18.33:54,18,0	1/1:0,0:26:50.93:150,51,0	0/0:12,0:12:33.03:0,33,358	0/0:4,0:4:12:0,12,123	0/0:20,0:20:60.18:0,60,724	0/0:7,0:7:18.06:0,18,216	0/0:9,0:9:24.03:0,24,274	1/1:1,0:10:18.33:54,18,0	0/0:5,0:5:15:0,15,154
chr10	108438507	.	G	GT	6647.50	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-6.986;DP=719;FS=3.861;HRun=1;HaplotypeScore=72.7104;InbreedingCoeff=0.9982;MQ=70.24;MQ0=0;MQRankSum=-0.238;QD=40.53;ReadPosRankSum=-1.444;VQSLOD=4.9084;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:54:99:0,159,1973	0/0:11,0:11:30.10:0,30,389	0/0:17,0:16:48.15:0,48,609	0/0:25,0:24:55.75:0,56,715	0/0:19,0:19:54.08:0,54,633	0/0:18,0:18:48.12:0,48,605	0/0:39,0:39:99:0,111,1371	1/1:3,30:33:90.20:1238,90,0	0/0:29,0:29:87.27:0,87,1113	0/0:23,0:23:63.16:0,63,755	0/0:9,0:9:27.09:0,27,350	0/0:20,0:20:54.14:0,54,658	0/0:27,0:27:78.21:0,78,990	0/0:31,0:31:90.27:0,90,1139	0/0:37,0:36:99:0,108,1372	0/0:32,0:32:96.30:0,96,1232	0/0:23,0:23:63.13:0,63,781	0/0:27,0:27:78.19:0,78,976	1/1:3,21:24:69.18:970,69,0	1/1:4,11:15:42.12:579,42,0	1/1:3,61:64:99:2602,178,0	0/0:25,0:25:74.74:0,75,868	0/0:9,0:9:27.09:0,27,350	0/0:41,0:40:99:0,114,1460	0/0:9,0:9:27.09:0,27,350	0/0:20,0:20:60.18:0,60,764	1/1:0,28:28:84.28:1258,84,0	0/0:9,0:9:21.05:0,21,256
chr10	108438569	.	G	GAA	6162.60	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-5.596;DP=811;FS=2.410;HRun=0;HaplotypeScore=104.7590;InbreedingCoeff=0.9903;MQ=68.00;MQ0=4;MQRankSum=-1.966;QD=39.50;ReadPosRankSum=-3.010;VQSLOD=5.6871;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:56:99:0,156,2127	0/0:16,0:16:45.04:0,45,640	0/0:34,0:26:68.52:0,69,870	0/0:39,0:35:95.68:0,96,1143	0/0:19,0:21:57.02:0,57,792	0/0:14,0:15:42.10:0,42,608	0/0:36,0:36:99:0,108,1514	1/1:1,34:37:99:1445,109,0	0/0:24,0:26:78.16:0,78,1098	0/0:34,0:35:99:0,105,1521	0/0:14,0:14:39.12:0,39,607	0/0:23,0:25:69.22:0,69,1093	0/0:21,0:21:63.17:0,63,942	0/0:30,0:31:87.19:0,87,1210	0/0:44,0:45:99:0,132,1917	0/0:24,0:26:75.16:0,75,1057	0/0:26,0:27:58.02:0,58,1210	0/0:31,0:32:90.16:0,90,1231	1/1:7,10:17:26.51:739,27,0	1/1:5,12:17:11.86:604,12,0	1/1:36,31:68:99:2600,143,0	0/0:28,0:29:62.25:0,62,1151	0/0:21,0:21:63.14:0,63,927	0/0:43,0:42:94.68:0,95,1581	0/0:14,0:15:45.14:0,45,698	0/0:36,0:39:99:0,114,1634	1/1:4,12:17:47.58:775,48,0	0/0:6,0:6:18.04:0,18,267
chr10	108440845	.	A	ATTCGTAGGC	19837.70	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-4.395;DP=633;FS=0.706;HRun=0;HaplotypeScore=163.1498;InbreedingCoeff=0.9986;MQ=80.50;MQ0=0;MQRankSum=-16.587;QD=98.21;ReadPosRankSum=-2.473;VQSLOD=4.6060;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,11:28:66.23:2922,66,0	1/1:5,2:11:18.06:674,18,0	0/0:24,0:24:66.23:0,66,1846	0/0:19,0:19:48.15:0,48,1402	0/0:15,0:15:42.14:0,42,1241	0/0:18,0:18:51.17:0,51,1461	0/0:34,0:34:96.33:0,96,2815	1/1:20,8:33:87.27:3231,87,0	0/0:33,0:33:93.30:0,93,2629	0/0:30,0:30:84.29:0,84,2385	0/0:13,0:13:33.11:0,33,969	0/0:29,0:29:78.27:0,78,2351	0/0:27,0:27:75.24:0,75,2097	0/0:24,0:24:66.23:0,66,1932	0/0:29,0:29:87.28:0,87,2465	0/0:21,0:21:63.22:0,63,1883	1/1:13,12:31:66.23:2933,66,0	1/1:10,6:18:42.14:1900,42,0	1/1:6,5:14:42.14:1495,42,0	1/1:5,11:17:39.13:1854,39,0	1/1:11,9:22:36.12:1489,36,0	0/0:25,0:25:69.24:0,69,1932	0/0:16,0:16:48.15:0,48,1342	0/0:17,0:17:48.16:0,48,1403	0/0:16,0:16:45.13:0,45,1206	0/0:27,0:27:72.24:0,72,2039	1/1:6,20:28:69.24:3341,69,0	0/0:14,0:14:39.13:0,39,1195
chr10	108441627	.	G	GC	4634.31	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-11.232;DP=573;FS=1.255;HRun=3;HaplotypeScore=56.3156;InbreedingCoeff=0.9908;MQ=75.36;MQ0=0;MQRankSum=-1.874;QD=39.27;ReadPosRankSum=-1.427;VQSLOD=4.4398;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1197	0/0:6,0:6:15.05:0,15,180	0/0:8,0:8:13.54:0,14,143	0/0:13,0:13:33.03:0,33,368	0/0:18,0:18:51.16:0,51,612	0/0:15,0:15:39.08:0,39,442	0/0:28,0:28:72.22:0,72,864	1/1:1,18:19:54.18:753,54,0	0/0:16,0:16:39.12:0,39,468	0/0:21,0:21:60.18:0,60,718	0/0:12,0:12:36.09:0,36,419	0/0:28,0:28:72.21:0,72,852	0/0:12,0:12:33.10:0,33,395	0/0:26,0:26:72.20:0,72,851	0/0:12,0:12:36.11:0,36,432	0/0:16,0:16:45.14:0,45,540	0/0:34,0:34:99:0,99,1159	0/0:38,0:38:99:0,108,1264	1/1:2,13:14:39.11:525,39,0	1/1:0,13:13:36.12:504,36,0	1/1:2,45:47:99:1889,135,0	0/0:19,0:19:54.14:0,54,624	0/0:10,0:10:30.09:0,30,360	0/0:44,0:44:99:0,126,1511	0/0:12,0:12:36.11:0,36,431	0/0:16,0:16:45.14:0,45,540	1/1:0,24:24:69.23:963,69,0	0/0:15,0:15:42.13:0,42,504
chr10	108443014	.	A	AG	3088.94	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-11.300;DP=578;FS=8.950;HRun=7;HaplotypeScore=63.5383;InbreedingCoeff=0.9882;MQ=85.70;MQ0=0;MQRankSum=-3.473;QD=26.86;ReadPosRankSum=3.751;VQSLOD=4.1754;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,31:36:75.23:906,75,0	1/1:1,5:6:12.04:145,12,0	0/0:22,0:22:36.25:0,36,387	0/0:33,0:32:73.94:0,74,662	0/0:18,0:18:51.06:0,51,483	0/0:16,0:16:45.07:0,45,432	0/0:30,0:30:81.10:0,81,767	0/0:24,0:24:57.03:0,57,531	0/0:16,0:16:42.06:0,42,405	0/0:17,0:17:48.07:0,48,463	0/0:10,0:10:24.04:0,24,231	0/0:22,0:22:60.08:0,60,575	0/0:19,0:19:54.07:0,54,516	0/0:20,0:20:51.08:0,51,492	0/0:28,0:28:84.09:0,84,792	0/0:13,0:13:39.05:0,39,372	1/1:9,29:38:87.26:1037,87,0	1/1:1,34:35:96.29:1159,96,0	0/0:12,0:11:30.05:0,30,289	0/0:16,0:16:42.05:0,42,400	0/0:28,0:28:63.08:0,63,608	0/0:20,0:20:51.07:0,51,491	0/0:17,0:17:45.05:0,45,429	0/0:26,0:26:72.07:0,72,686	0/0:13,0:13:33.05:0,33,318	0/0:20,0:20:60.05:0,60,570	0/0:17,0:17:51.07:0,51,488	0/0:6,0:6:18.03:0,18,174
chr10	108443906	.	C	CTG	2043.06	PASS	AB=0.681;AC=6;AF=0.107;AN=56;BaseQRankSum=-9.300;DP=678;FS=0.529;HRun=0;HaplotypeScore=88.6007;InbreedingCoeff=0.2823;MQ=69.11;MQ0=1;MQRankSum=1.011;QD=16.61;ReadPosRankSum=2.258;VQSLOD=3.7189;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,31:46:25.92:1047,0,26	1/1:2,5:7:8.70:143,9,0	0/0:46,0:27:5.89:0,6,259	0/0:35,0:25:24.97:0,25,300	0/0:17,0:19:38.76:0,39,408	0/0:16,0:16:39.07:0,39,428	0/0:34,0:35:81.79:0,82,901	0/0:30,0:31:32.89:0,33,352	0/0:27,0:27:54.13:0,54,619	0/0:16,0:16:23.72:0,24,240	0/0:14,0:14:24.07:0,24,286	0/0:23,0:23:36.08:0,36,415	0/0:13,0:14:26.91:0,27,299	0/0:15,0:15:33.10:0,33,393	0/0:29,0:30:78.06:0,78,895	0/0:27,0:27:57.16:0,57,667	0/1:8,17:26:4.57:531,0,5	0/1:10,15:26:16.78:397,0,17	0/1:15,2:17:49.37:49,0,281	0/0:16,0:15:36.08:0,36,414	0/0:33,0:35:89.73:0,90,980	0/0:23,0:26:23.81:0,24,456	0/0:20,0:21:45.14:0,45,535	0/0:30,0:30:57.14:0,57,654	0/0:11,0:15:29.42:0,29,270	0/0:24,0:24:48.13:0,48,554	0/0:22,0:22:60.18:0,60,714	0/0:16,0:18:47.96:0,48,537
chr10	108444386	.	G	GGATAGATA	4685.57	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-1.957;DP=737;FS=7.760;HRun=0;HaplotypeScore=184.7631;InbreedingCoeff=0.7838;MQ=67.02;MQ0=6;MQRankSum=-5.723;QD=16.21;ReadPosRankSum=-5.274;VQSLOD=1.1070;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:31:3.01:108,3,0	1/1:10,0:10:11.97:224,12,0	0/0:20,0:15:3:0,3,28	0/0:21,0:16:3.01:0,3,41	0/0:30,0:30:57.18:0,57,1203	0/0:26,0:26:54.16:0,54,1174	0/0:16,0:16:30.09:0,30,496	1/1:49,0:49:51.13:849,51,0	0/0:29,0:29:39.12:0,39,843	0/0:26,0:26:53.75:0,54,1014	0/0:31,0:31:66.20:0,66,1440	0/0:18,0:18:36.09:0,36,743	0/0:29,0:29:54.19:0,54,1290	0/0:27,0:27:60.20:0,60,1338	0/0:39,0:39:51.13:0,51,1005	1/1:13,0:35:7.83:220,8,0	1/1:28,0:28:3.01:108,3,0	0/1:21,0:19:99:326,0,449	1/1:10,8:24:42.13:1136,42,0	1/1:12,13:31:17.98:572,18,0	1/1:24,0:24:8.82:161,9,0	0/0:27,0:27:45.15:0,45,1012	0/0:19,0:19:25.15:0,25,900	0/0:12,0:12:18.53:0,19,416	0/0:29,0:30:69.23:0,69,1550	0/0:39,0:39:74.46:0,74,1599	1/1:11,18:34:24.08:982,24,0	0/0:9,0:9:24.08:0,24,572
chr10	108444413	.	TAG	T	497.69	PASS	AB=0.788;AC=2;AF=0.036;AN=56;BaseQRankSum=5.439;DP=739;FS=6.491;HRun=0;HaplotypeScore=107.3888;InbreedingCoeff=-0.0442;MQ=59.19;MQ0=13;MQRankSum=-0.326;QD=15.08;ReadPosRankSum=1.947;VQSLOD=2.9335;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:31:4.55:0,5,29	0/1:10,0:8:20.23:20,0,97	0/0:17,0:11:30.08:0,30,413	0/0:13,0:8:14.33:0,14,220	0/0:33,0:33:99:0,99,1690	0/0:30,0:30:90.31:0,90,1570	0/0:17,0:17:48.16:0,48,851	0/0:51,0:49:99:0,144,2097	0/0:30,0:30:78.26:0,78,1337	0/0:28,0:28:73.54:0,74,1349	0/0:35,0:35:99:0,102,1849	0/0:21,0:21:60.20:0,60,1053	0/0:25,0:25:75.24:0,75,1325	0/0:28,0:28:78.27:0,78,1429	0/0:33,0:33:93.29:0,93,1592	0/0:34,0:34:63.02:0,63,858	0/0:24,0:23:8.92:0,9,80	0/1:6,17:21:99:565,0,119	0/0:20,0:20:60.20:0,60,958	0/0:30,0:30:50.97:0,51,752	0/0:17,0:17:27.09:0,27,440	0/0:27,0:27:78.23:0,78,1313	0/0:21,0:21:63.20:0,63,1107	0/0:10,0:10:23.18:0,23,426	0/0:31,0:31:87.30:0,87,1592	0/0:39,0:39:99:0,117,2037	0/0:47,0:46:84.14:0,84,1205	0/0:10,0:10:30.10:0,30,547
chr10	108444415	.	G	GATAGATAGATAGAT	2805.12	PASS	AB=0.993;AC=12;AF=0.214;AN=56;BaseQRankSum=-1.053;DP=745;FS=5.868;HRun=0;HaplotypeScore=255.6005;InbreedingCoeff=0.2095;MQ=59.08;MQ0=13;MQRankSum=-6.084;QD=10.55;ReadPosRankSum=-0.812;VQSLOD=1.9623;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,21:35:4.26:210,4,0	1/1:3,0:9:3.26:125,3,0	0/0:17,0:11:15.04:0,15,196	0/0:14,0:8:7.72:0,8,111	0/0:34,0:34:99:0,102,2449	0/0:30,0:30:84.27:0,84,2212	0/0:17,0:17:45.15:0,45,893	0/1:51,0:49:99:738,0,947	0/0:26,0:26:66.22:0,66,1748	0/0:28,0:29:67.28:0,67,2028	0/0:34,0:34:96.31:0,96,2767	0/0:20,0:20:60.17:0,60,1488	0/0:27,0:27:78.24:0,78,2348	0/0:28,0:28:78:0,78,2301	0/0:31,0:31:84.27:0,84,2014	0/0:32,0:32:47.98:0,48,508	1/1:3,16:27:3.01:207,3,0	0/1:21,0:20:99:532,0,638	0/1:20,0:20:99:448,0,168	0/1:29,0:29:99:255,0,285	0/1:17,0:17:99:102,0,111	0/0:27,0:27:63.20:0,63,1825	0/0:21,0:21:63.19:0,63,1746	0/0:9,0:9:21.54:0,22,668	0/0:31,0:31:87.30:0,87,2765	0/0:39,0:39:99:0,111,3024	0/1:49,0:48:99:336,0,701	0/0:13,0:13:33.03:0,33,1000
chr10	108444421	.	T	TAG	1292.02	PASS	AB=0.922;AC=10;AF=0.179;AN=56;BaseQRankSum=2.344;DP=726;FS=5.895;HRun=0;HaplotypeScore=102.2396;InbreedingCoeff=-0.2114;MQ=60.56;MQ0=12;MQRankSum=-5.784;QD=4.57;ReadPosRankSum=-1.283;VQSLOD=2.2850;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:28:12.95:64,0,13	0/1:11,0:10:16.02:16,0,56	0/0:13,0:8:20.89:0,21,267	0/0:13,0:8:6.40:0,6,114	0/0:36,0:36:99:0,108,1601	0/0:31,0:31:90.29:0,90,1353	0/0:16,0:16:48.16:0,48,723	0/1:37,16:51:99:671,0,1209	0/0:24,0:24:66.22:0,66,1007	0/0:27,0:28:74.17:0,74,1155	0/0:33,0:33:96.31:0,96,1444	0/0:22,0:22:66.19:0,66,961	0/0:29,0:29:87.27:0,87,1287	0/0:30,0:30:84.27:0,84,1257	0/0:28,0:28:84.29:0,84,1282	0/1:30,0:30:99:116,0,227	0/1:25,0:24:19.67:20,0,38	0/1:20,3:21:99:127,0,465	0/1:20,0:20:99:129,0,423	0/1:26,0:26:99:112,0,363	0/1:9,7:16:99:113,0,119	0/0:24,0:24:69.22:0,69,1031	0/0:22,0:22:66.22:0,66,995	0/0:9,0:9:24.54:0,25,345	0/0:34,0:33:96.27:0,96,1380	0/0:39,0:39:99:0,117,1757	0/1:46,1:46:68.83:69,0,913	0/0:12,0:12:32.61:0,33,503
chr10	108445188	.	C	CTGTGCA	3153.45	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.821;DP=1209;FS=2.925;HRun=0;HaplotypeScore=293.8906;InbreedingCoeff=0.9514;MQ=56.88;MQ0=5;MQRankSum=-10.570;QD=23.89;ReadPosRankSum=-2.118;VQSLOD=2.9247;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,35:53:20.31:608,20,0	1/1:4,14:19:14.72:449,15,0	0/0:55,0:38:81.25:0,81,1618	0/0:72,0:54:99:0,102,2076	0/0:31,0:31:78.18:0,78,1519	0/0:32,0:32:81.28:0,81,1766	0/0:39,0:40:82.99:0,83,1819	0/0:32,0:32:66.28:0,66,438	0/0:59,0:59:99:0,144,3109	0/0:84,0:84:99:0,229,4792	0/0:22,0:22:54.17:0,54,1139	0/0:49,0:49:99:0,132,2866	0/0:43,0:43:99:0,111,2349	0/0:56,0:56:99:0,138,2811	0/0:59,0:59:99:0,159,3411	0/0:54,0:54:99:0,141,2954	1/1:8,25:36:35.86:1160,36,0	1/1:15,8:24:6.25:1088,6,0	0/0:19,0:17:20.99:0,21,199	0/0:30,0:30:12.34:0,12,80	0/0:78,0:78:41.04:0,41,404	0/0:35,0:35:90.30:0,90,1918	0/0:39,0:39:99:0,102,2148	0/0:56,0:57:99:0,138,3025	0/0:40,0:40:99:0,108,2343	0/0:52,0:52:99:0,132,2857	0/0:23,0:23:14.88:0,15,112	0/0:14,0:14:37.53:0,38,857
chr10	108445192	.	GCATGTTGTATA	G	1135.53	PASS	AB=0.936;AC=7;AF=0.125;AN=56;BaseQRankSum=9.605;DP=1176;FS=10.420;HRun=0;HaplotypeScore=388.1507;InbreedingCoeff=-0.1464;MQ=57.42;MQ0=2;MQRankSum=-6.296;QD=4.56;ReadPosRankSum=-3.067;VQSLOD=0.4183;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:53,0:53:31.26:31,0,1455	0/0:19,0:19:6.09:0,6,628	0/0:52,0:35:99:0,102,4578	0/0:63,0:52:89.34:0,89,4922	0/0:29,0:29:84.27:0,84,4319	0/0:31,0:31:93.28:0,93,4476	0/0:42,0:42:99:0,117,5775	0/1:19,11:30:99:797,0,491	0/0:58,0:58:99:0,169,8877	0/0:80,0:80:99:0,241,12730	0/0:22,0:22:66.19:0,66,3478	0/0:52,0:52:99:0,153,7779	0/0:43,0:43:99:0,129,6523	0/0:57,0:57:99:0,163,8523	0/0:59,0:59:99:0,174,9411	0/0:51,0:51:99:0,153,8053	0/1:34,0:34:39.47:39,0,713	0/1:23,0:23:15.01:15,0,985	0/1:16,0:15:67.73:198,0,68	0/0:29,0:29:26.83:0,27,245	0/1:55,15:70:99:167,0,541	0/0:35,0:35:99:0,105,5519	0/0:37,0:37:99:0,108,5613	0/0:58,0:58:99:0,171,8721	0/0:40,0:40:99:0,120,6447	0/0:53,0:53:99:0,159,8087	0/1:23,0:23:17.68:18,0,160	0/0:14,0:14:28.64:0,29,2145
chr10	108446889	.	T	TGC	456.14	PASS	AB=0.932;AC=6;AF=0.107;AN=56;BaseQRankSum=9.076;DP=667;FS=2.562;HRun=0;HaplotypeScore=121.1758;InbreedingCoeff=-0.1363;MQ=65.65;MQ0=2;MQRankSum=-5.801;QD=3.00;ReadPosRankSum=-3.128;VQSLOD=1.8564;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:42.10:0,42,597	0/0:10,0:10:2.08:0,2,82	0/0:44,0:25:66.36:0,66,847	0/0:61,0:38:93.73:0,94,1248	0/0:15,0:15:42.14:0,42,642	0/0:8,0:8:21.05:0,21,299	0/0:36,0:36:98.94:0,99,1404	0/1:11,9:20:99:238,0,278	0/0:17,0:17:45.15:0,45,685	0/0:28,0:28:84.15:0,84,1253	0/0:8,0:8:24.08:0,24,367	0/0:29,0:29:84.24:0,84,1219	0/0:26,0:26:72.18:0,72,993	0/0:26,0:26:75.25:0,75,1145	0/0:20,0:20:54.17:0,54,804	0/0:23,0:23:57.16:0,57,829	0/1:21,2:23:99:100,0,370	0/1:19,0:19:57.79:58,0,366	0/1:21,0:21:89.53:90,0,418	0/0:14,0:14:3.01:0,3,46	0/1:53,1:53:19.66:20,0,273	0/0:14,0:14:42.13:0,42,621	0/0:11,0:11:30.07:0,30,416	0/0:36,0:36:99:0,99,1484	0/0:15,0:15:45.14:0,45,667	0/0:15,0:15:45.14:0,45,667	0/1:15,0:15:73.22:74,0,73	0/0:13,0:13:39.13:0,39,596
chr10	108446896	.	G	GTGTGCA	4058.68	PASS	AB=0.585;AC=17;AF=0.304;AN=56;BaseQRankSum=-5.560;DP=694;FS=3.657;HRun=0;HaplotypeScore=147.2860;InbreedingCoeff=0.8838;MQ=59.89;MQ0=5;MQRankSum=-6.732;QD=16.98;ReadPosRankSum=-2.849;VQSLOD=3.0167;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,32:48:0.02:0,0,0	1/1:1,10:11:3.01:53,3,0	0/0:49,0:23:30.07:0,30,346	0/0:56,0:32:49.40:0,49,717	0/0:15,0:15:36.11:0,36,744	0/0:8,0:8:12.04:0,12,244	0/0:34,0:34:78.11:0,78,1419	1/1:18,0:18:45.07:854,45,0	0/0:18,0:18:42.11:0,42,831	0/0:27,0:28:66.21:0,66,1303	0/0:9,0:9:21.07:0,21,458	0/0:28,0:28:75.24:0,75,1553	0/0:28,0:28:74.99:0,75,1344	0/0:32,0:32:90.18:0,90,1698	0/0:22,0:22:54.06:0,54,992	0/0:22,0:22:63.16:0,63,1231	1/1:19,6:25:29.54:745,30,0	1/1:16,5:21:23.97:642,24,0	1/1:12,12:24:39.02:937,39,0	1/1:2,12:14:0.47:1,0,0	1/1:11,46:62:6.02:183,6,0	0/0:15,0:15:39.13:0,39,827	0/0:10,0:10:21.07:0,21,452	0/0:36,0:36:90.29:0,90,1917	0/0:15,0:15:42.11:0,42,814	0/0:16,0:16:39.12:0,39,743	1/1:2,13:15:21.07:643,21,0	0/0:14,0:14:27.04:0,27,502
chr10	108446977	.	TGCGTGCGTGCGTGCGTGCGTGC	T	1376.27	PASS	AB=1.000;AC=17;AF=0.327;AN=52;BaseQRankSum=4.766;DP=426;FS=13.850;HRun=0;HaplotypeScore=173.6113;InbreedingCoeff=0.7344;MQ=50.17;MQ0=21;MQRankSum=-3.304;QD=9.36;ReadPosRankSum=-3.553;VQSLOD=1.0089;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:18:0.36:1,0,0	1/1:4,0:4:0.47:1,0,0	0/0:16,0:2:3.01:0,3,48	0/1:23,0:5:3.32:8,0,3	0/0:5,0:5:9.03:0,9,256	0/0:12,0:12:21.07:0,21,881	0/0:38,0:34:68.38:0,68,2277	1/1:3,7:9:17.99:333,18,0	0/0:13,0:11:29.74:0,30,1153	0/0:17,0:16:44.18:0,44,1777	./.	0/0:22,0:22:56.99:0,57,2540	0/0:17,0:17:48.09:0,48,1601	0/0:27,0:27:72.18:0,72,2393	0/0:20,0:18:48.13:0,48,2349	0/0:20,0:20:51.04:0,51,2951	1/1:17,0:17:17.58:372,18,0	1/1:1,24:25:9.03:246,9,0	1/1:4,0:3:3.01:100,3,0	./.	1/1:38,0:38:20.53:359,21,0	0/0:4,0:3:6.02:0,6,74	0/0:3,0:3:5.98:0,6,235	0/0:35,0:34:76.45:0,76,4077	0/0:11,0:10:20.83:0,21,884	0/0:10,0:10:21.03:0,21,558	1/1:6,0:6:6:120,6,0	0/0:4,0:4:12.02:0,12,283
chr10	108446997	.	TGC	T	1058.71	PASS	AB=0.853;AC=10;AF=0.200;AN=50;BaseQRankSum=6.002;DP=445;FS=56.555;HRun=0;HaplotypeScore=69.9486;InbreedingCoeff=-0.0173;MQ=49.96;MQ0=18;MQRankSum=-0.221;QD=7.96;ReadPosRankSum=-0.941;VQSLOD=0.6479;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,10:26:69.01:277,0,69	0/0:6,0:6:3.23:0,3,34	./.	./.	0/1:5,0:5:0.73:1,0,45	0/0:16,0:16:4.96:0,5,240	0/0:42,1:39:52.53:0,53,715	0/0:15,0:12:6.61:0,7,49	0/0:10,0:7:6.90:0,7,132	0/0:24,0:22:20.51:0,21,365	./.	0/0:25,0:25:17.73:0,18,457	0/0:9,0:9:26.82:0,27,253	0/0:21,0:21:53.83:0,54,493	0/0:20,0:17:32.40:0,32,434	0/0:15,0:14:35.94:0,36,472	0/1:6,30:36:35.71:748,0,36	0/1:31,0:31:35.83:67,0,36	1/1:8,0:8:3.34:12,3,0	0/1:5,0:5:0:0,0,0	0/0:38,0:37:21.76:0,22,268	0/1:5,0:3:10.35:10,0,26	0/1:3,2:5:30.93:31,0,89	0/0:47,0:46:85.32:0,85,1193	0/0:8,0:7:11.84:0,12,125	0/1:7,2:9:34.85:35,0,102	0/0:5,0:5:5.81:0,6,47	0/0:8,0:8:15.89:0,16,150
chr10	108446999	.	CGT	C	561.21	PASS	AB=0.876;AC=12;AF=0.240;AN=50;BaseQRankSum=6.029;DP=464;FS=31.289;HRun=0;HaplotypeScore=73.7394;InbreedingCoeff=-0.2887;MQ=50.06;MQ0=18;MQRankSum=1.098;QD=2.83;ReadPosRankSum=-0.018;VQSLOD=-0.1791;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,1:26:95.85:139,0,96	0/0:6,0:6:3.26:0,3,17	./.	0/0:3,0:2:2.90:0,3,16	0/1:4,1:5:28.15:28,0,37	0/1:14,3:17:6.62:7,0,291	0/0:47,1:44:34.69:0,35,792	0/0:15,0:12:8.73:0,9,52	0/1:9,1:7:22.22:22,0,91	0/0:24,0:22:0.65:0,1,354	./.	0/1:21,6:27:54.97:55,0,422	0/0:12,0:12:21.05:0,21,275	0/0:23,0:23:33.10:0,33,454	0/1:19,0:16:3.98:4,0,346	0/0:16,0:15:26.36:0,26,327	0/1:36,1:37:78.09:294,0,78	0/1:29,2:31:68.44:68,0,113	./.	0/1:1,0:5:0:0,0,0	0/0:39,2:40:1.05:0,1,105	0/1:2,2:3:34.09:59,0,34	0/1:5,0:5:6.01:6,0,115	0/0:49,1:49:53.39:0,53,1263	0/0:7,0:6:2.90:0,3,46	0/1:9,0:9:0.91:1,0,106	0/0:5,0:5:2.50:0,2,10	0/0:6,0:6:5.33:0,5,140
chr10	108447778	.	TA	T	3819.58	PASS	AB=0.913;AC=19;AF=0.339;AN=56;BaseQRankSum=7.123;DP=552;FS=5.593;HRun=10;HaplotypeScore=79.5668;InbreedingCoeff=0.9421;MQ=69.29;MQ0=1;MQRankSum=-0.920;QD=19.49;ReadPosRankSum=0.986;VQSLOD=4.4867;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:71.47:608,71,0	1/1:3,6:9:23.96:203,24,0	0/0:20,0:18:22.45:0,22,242	0/1:19,1:17:2.97:3,0,129	0/0:24,1:25:46.11:0,46,709	0/0:17,1:18:19.14:0,19,430	0/0:11,0:11:27.07:0,27,299	1/1:7,19:26:36.60:531,37,0	0/0:31,0:31:78.17:0,78,842	0/0:30,0:30:66.09:0,66,683	0/0:22,2:24:28.09:0,28,538	0/0:21,0:20:39.01:0,39,397	0/0:10,0:10:24.06:0,24,258	0/0:18,0:18:23.42:0,23,434	0/0:21,0:21:42.11:0,42,465	0/0:20,1:21:22.07:0,22,472	1/1:4,15:19:44.96:385,45,0	1/1:4,11:15:41.75:344,42,0	1/1:1,19:20:56.98:492,57,0	1/1:1,13:14:38.96:332,39,0	1/1:3,7:10:20.99:182,21,0	0/0:19,0:19:48.12:0,48,524	0/0:18,0:18:48.11:0,48,523	0/0:18,0:18:51.14:0,51,563	0/0:18,0:18:51.14:0,51,564	0/0:22,0:22:54.12:0,54,576	1/1:9,25:34:59.74:738,60,0	0/0:8,0:8:21.04:0,21,223
chr10	108447806	.	C	CA	1526.43	PASS	AB=0.906;AC=12;AF=0.214;AN=56;BaseQRankSum=-2.604;DP=631;FS=2.071;HRun=13;HaplotypeScore=113.7870;InbreedingCoeff=0.2546;MQ=70.74;MQ0=1;MQRankSum=0.270;QD=6.13;ReadPosRankSum=-5.313;VQSLOD=1.3574;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:2.17:0,2,64	0/0:9,0:9:6.27:0,6,17	0/0:33,1:23:31.90:0,32,199	0/0:25,0:18:8.96:0,9,46	0/1:28,3:33:23.32:23,0,267	0/0:16,2:18:7.62:0,8,187	0/0:15,0:15:13.30:0,13,186	1/1:23,18:45:65.18:645,65,0	0/0:23,0:23:7.40:0,7,185	0/1:25,2:27:24.89:25,0,255	0/1:26,1:27:32.60:33,0,197	0/0:14,0:13:17.20:0,17,104	0/0:18,0:19:49.30:0,49,315	0/0:17,0:17:0.60:0,1,118	0/0:13,0:16:31.53:0,32,180	0/0:19,1:21:15.60:0,16,235	0/0:27,0:27:14.21:0,14,47	0/0:21,0:21:5.85:0,6,18	0/1:19,7:27:21.67:208,0,22	0/1:18,2:21:15.01:15,0,191	1/1:2,7:10:20.85:177,21,0	0/0:17,0:17:23.61:0,24,164	0/0:14,0:16:22.62:0,23,144	0/1:22,2:26:57.93:58,0,188	0/0:16,0:18:24.68:0,25,154	0/0:32,0:33:63.31:0,63,419	1/1:23,8:31:45.92:506,46,0	0/0:12,0:12:23.32:0,23,164
chr10	108447818	.	AAC	A	734.04	PASS	AB=0.892;AC=5;AF=0.089;AN=56;BaseQRankSum=9.769;DP=632;FS=11.149;HRun=0;HaplotypeScore=113.2077;InbreedingCoeff=0.4029;MQ=68.61;MQ0=1;MQRankSum=-1.575;QD=8.64;ReadPosRankSum=1.995;VQSLOD=2.9735;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,1:27:75.74:175,0,76	0/1:6,2:8:5.85:93,0,6	0/0:31,0:23:33.70:0,34,554	0/0:21,0:15:6.81:0,7,191	0/0:27,0:27:78.09:0,78,1174	0/0:19,0:19:44.61:0,45,634	0/0:16,0:16:45.10:0,45,695	0/0:46,0:46:99:0,130,1527	0/0:21,0:21:53.18:0,53,787	0/0:28,0:27:78.12:0,78,1064	0/0:24,0:24:66.19:0,66,973	0/0:13,0:12:36.06:0,36,488	0/0:21,0:21:63.07:0,63,911	0/0:17,0:17:45.10:0,45,608	0/0:19,0:19:53.82:0,54,688	0/0:23,0:23:68.93:0,69,869	1/1:24,5:29:54.58:474,55,0	0/1:19,2:21:13.36:116,0,13	0/0:28,0:27:74.72:0,75,785	0/0:24,0:24:71.93:0,72,900	0/0:13,0:13:27.92:0,28,289	0/0:18,0:18:45.09:0,45,669	0/0:14,0:14:38.92:0,39,525	0/0:32,0:32:77.02:0,77,1108	0/0:19,0:19:56.85:0,57,659	0/0:32,0:32:90.08:0,90,1306	0/0:30,0:30:80.25:0,80,847	0/0:10,0:10:27.07:0,27,445
chr10	108447819	.	AC	A	1583.10	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.884;DP=608;FS=23.084;HRun=2;HaplotypeScore=94.1861;InbreedingCoeff=0.9884;MQ=68.50;MQ0=1;MQRankSum=-1.676;QD=19.79;ReadPosRankSum=0.633;VQSLOD=2.3694;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,8:24:14.63:433,15,0	1/1:4,4:8:17.90:184,18,0	0/0:32,0:23:33.84:0,34,453	0/0:20,0:14:18.06:0,18,188	0/0:27,0:27:71.81:0,72,797	0/0:18,0:18:25.13:0,25,443	0/0:15,0:15:44.48:0,44,515	0/0:46,0:46:99:0,128,1094	0/0:21,0:21:53.14:0,53,586	0/0:27,0:26:74.22:0,74,776	0/0:23,0:23:56.92:0,57,609	0/0:11,0:11:30.06:0,30,340	0/0:21,0:21:54.96:0,55,614	0/0:15,0:15:38.95:0,39,401	0/0:18,0:18:44.61:0,45,489	0/0:23,0:23:54.45:0,54,575	1/1:19,10:29:79.63:788,80,0	1/1:5,14:19:29.96:337,30,0	0/0:26,0:25:65.18:0,65,561	0/0:24,0:24:64.40:0,64,633	0/0:13,0:13:23.79:0,24,178	0/0:17,0:17:42.08:0,42,492	0/0:14,0:14:37.68:0,38,379	0/0:30,0:30:78.39:0,78,813	0/0:19,0:19:33.26:0,33,406	0/0:31,0:31:75.46:0,75,874	0/0:28,0:28:47.97:0,48,453	0/0:9,0:9:24.06:0,24,306
chr10	108449686	.	GGTGTGTGTGTGT	G	916.19	PASS	AB=0.889;AC=7;AF=0.135;AN=52;BaseQRankSum=5.138;DP=583;FS=5.680;HRun=0;HaplotypeScore=185.7567;InbreedingCoeff=0.6427;MQ=72.33;MQ0=13;MQRankSum=-4.732;QD=10.53;ReadPosRankSum=2.545;VQSLOD=1.6346;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,5:33:3.01:103,3,0	1/1:4,0:9:12.04:335,12,0	./.	./.	0/0:16,0:16:15.05:0,15,558	0/0:18,0:18:19.31:0,19,739	0/0:21,0:20:36.11:0,36,1749	0/0:27,0:27:14.40:0,14,249	0/0:17,0:25:30.10:0,30,1480	0/0:29,0:30:45.61:0,46,1760	0/0:8,0:9:9.02:0,9,300	0/0:16,0:20:24.08:0,24,681	0/0:13,0:13:21.03:0,21,876	0/0:16,0:17:27.09:0,27,1211	0/0:22,0:24:42.14:0,42,2147	0/0:20,0:23:30.99:0,31,1329	1/1:21,5:28:12.04:393,12,0	0/1:14,1:16:7.06:215,0,7	0/0:15,0:15:12.09:0,12,202	0/0:8,0:10:1.64:0,2,90	0/0:32,0:34:27.09:0,27,734	0/0:22,0:22:21.07:0,21,894	0/0:15,0:14:6.02:0,6,174	0/0:27,0:27:30.10:0,30,1471	0/0:17,0:16:15.05:0,15,722	0/0:20,0:20:33.11:0,33,1297	0/0:10,0:13:9.03:0,9,186	0/0:5,0:5:12.04:0,12,658
chr10	108455349	.	ATCTG	A	3903.08	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.167;DP=741;FS=4.099;HRun=0;HaplotypeScore=130.6461;InbreedingCoeff=0.9709;MQ=60.48;MQ0=4;MQRankSum=-0.483;QD=32.26;ReadPosRankSum=3.804;VQSLOD=3.8571;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:26:56.89:897,57,0	1/1:0,11:11:30.10:509,30,0	0/0:33,0:21:33.89:0,34,589	0/0:24,0:19:35.84:0,36,701	0/0:20,0:20:51.13:0,51,1181	0/0:19,0:19:51.16:0,51,1213	0/0:22,0:22:40.38:0,40,971	0/0:42,0:42:75.21:0,75,1629	0/0:19,1:20:6.24:0,6,1083	0/0:38,0:38:90.29:0,90,2065	0/0:14,0:14:30.10:0,30,701	0/0:31,0:31:81.28:0,81,1924	0/0:24,0:24:66.23:0,66,1587	0/0:27,0:27:69.24:0,69,1673	0/0:28,0:28:69.22:0,69,1569	0/0:22,0:22:63.22:0,63,1535	1/1:7,36:41:72.25:1222,72,0	1/1:6,34:38:76.50:1276,77,0	0/0:17,0:16:42.14:0,42,912	0/0:24,0:24:57.20:0,57,1423	0/0:43,0:43:75.15:0,75,1778	0/0:24,0:24:66.21:0,66,1555	0/0:10,0:10:21.07:0,21,447	0/0:27,0:27:69.22:0,69,1638	0/0:20,0:20:57.20:0,57,1363	0/0:31,0:31:81.28:0,81,1968	0/0:50,0:50:99:0,126,3128	0/0:10,0:10:30.10:0,30,716
chr10	108455429	.	A	ATGTCTGTC	6313.58	PASS	AB=0.703;AC=15;AF=0.268;AN=56;BaseQRankSum=5.969;DP=810;FS=6.790;HRun=0;HaplotypeScore=218.6255;InbreedingCoeff=0.8435;MQ=57.76;MQ0=2;MQRankSum=-6.035;QD=21.05;ReadPosRankSum=-3.976;VQSLOD=2.8511;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:27:35.83:730,36,0	1/1:9,0:15:30.10:515,30,0	0/0:29,0:27:48.08:0,48,794	0/0:21,0:15:27.08:0,27,482	0/0:25,0:25:60.19:0,60,1187	0/0:26,0:26:72.25:0,72,1538	0/0:18,0:18:47.71:0,48,861	1/1:49,0:49:99:1723,120,0	0/0:26,0:26:73.49:0,73,1586	0/0:34,0:34:84.28:0,84,1641	0/0:23,0:23:63.17:0,63,1120	0/0:28,0:28:53.27:0,53,1483	0/0:29,0:29:81.23:0,81,1711	0/0:30,0:30:87.25:0,87,1637	0/0:31,0:31:66.20:0,66,1162	0/0:27,0:27:78.24:0,78,1568	1/1:28,0:28:51.12:855,51,0	0/1:34,0:35:30.57:542,0,31	1/1:7,13:25:56.29:1139,56,0	0/1:4,20:26:0.16:1,0,0	0/1:10,25:42:0:1,0,0	0/0:34,0:34:90.27:0,90,1755	0/0:18,0:18:51.16:0,51,1027	0/0:31,0:31:69.18:0,69,1402	0/0:28,0:28:64.19:0,64,846	0/0:36,0:36:93.26:0,93,1795	1/1:6,33:47:20.74:807,21,0	0/0:16,0:16:42.14:0,42,956
chr10	108455435	.	GTCTA	G	387.11	PASS	AB=0.986;AC=5;AF=0.096;AN=52;BaseQRankSum=2.697;DP=785;FS=3.260;HRun=0;HaplotypeScore=166.6990;InbreedingCoeff=0.2506;MQ=57.46;MQ0=4;MQRankSum=-0.549;QD=2.91;ReadPosRankSum=-1.926;VQSLOD=2.3173;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:6:0,6,57	0/0:16,0:16:18.92:0,19,188	./.	./.	0/0:23,0:23:27.08:0,27,590	0/0:25,0:25:35.21:0,35,1221	0/0:20,0:20:17.89:0,18,377	0/1:54,0:53:8.02:8,0,169	0/0:26,0:27:34.93:0,35,1133	0/0:35,0:34:13.21:0,13,811	0/1:21,1:22:16.50:16,0,553	0/0:30,0:30:60.19:0,60,1257	0/0:28,0:28:1.57:0,2,964	0/0:31,0:31:51.14:0,51,1065	1/1:13,18:31:30.10:466,30,0	0/0:26,0:26:39.13:0,39,894	0/0:27,0:27:15.88:0,16,176	0/0:34,0:32:26.96:0,27,291	0/0:21,0:20:11.87:0,12,83	0/1:26,0:26:12.05:12,0,35	0/0:39,0:39:2.16:0,2,22	0/0:32,0:32:51.16:0,51,1153	0/0:18,0:18:21.07:0,21,494	0/0:30,0:31:42.03:0,42,984	0/0:18,0:27:36.08:0,36,541	0/0:33,0:33:45.13:0,45,935	0/0:42,0:42:21.06:0,21,246	0/0:16,0:16:27.09:0,27,633
chr10	108455802	.	T	TTTG	7658.56	PASS	AB=0.600;AC=17;AF=0.304;AN=56;BaseQRankSum=-15.118;DP=697;FS=15.806;HRun=0;HaplotypeScore=88.1830;InbreedingCoeff=0.9381;MQ=71.10;MQ0=0;MQRankSum=-1.327;QD=34.19;ReadPosRankSum=-1.805;VQSLOD=3.8798;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,31:41:69.24:1409,69,0	1/1:3,8:11:21.07:401,21,0	0/0:30,0:28:51.13:0,51,664	0/0:26,0:23:29.89:0,30,374	0/0:21,0:21:45.14:0,45,633	0/0:21,0:21:57.18:0,57,807	0/0:34,0:34:69.22:0,69,979	1/1:19,21:41:66.07:1119,66,0	0/0:19,0:19:48.16:0,48,694	0/0:24,0:24:57.17:0,57,783	0/0:27,0:27:63.18:0,63,872	0/0:27,0:27:66.22:0,66,951	0/0:27,0:27:69.22:0,69,981	0/0:24,0:24:60.19:0,60,851	0/0:30,0:30:69.20:0,69,936	0/0:28,0:28:69.21:0,69,961	1/1:4,20:25:42.14:858,42,0	1/1:2,11:13:33.11:674,33,0	1/1:4,15:19:42.50:677,42,0	0/1:8,16:24:4.23:623,0,4	1/1:4,17:21:42.14:858,42,0	0/0:24,0:24:57.16:0,57,773	0/0:28,0:28:66.21:0,66,936	0/0:34,0:34:90.30:0,90,1297	0/0:18,0:18:39.12:0,39,546	0/0:22,0:22:63.21:0,63,911	1/1:9,19:28:51.17:1039,51,0	0/0:9,0:9:24.08:0,24,347
chr10	108456211	.	TTG	T	294.43	PASS	AB=0.922;AC=15;AF=0.300;AN=50;BaseQRankSum=6.204;DP=626;FS=1.633;HRun=0;HaplotypeScore=96.5341;InbreedingCoeff=0.2005;MQ=61.64;MQ0=9;MQRankSum=-1.358;QD=1.25;ReadPosRankSum=1.143;VQSLOD=1.8366;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:35:11.98:0,12,98	1/1:8,5:14:14.87:146,15,0	./.	./.	0/0:21,0:21:26.98:0,27,380	0/0:18,0:18:10.15:0,10,377	0/0:22,0:22:19.27:0,19,231	1/1:13,0:19:2.37:8,2,0	0/1:18,2:20:41.86:42,0,181	0/1:22,0:22:14.89:15,0,153	0/1:25,2:27:2.88:3,0,329	0/1:24,2:26:3.06:3,0,283	0/1:15,2:17:2.93:3,0,303	0/0:20,0:17:18.01:0,18,219	0/0:24,1:25:5.97:0,6,397	0/1:21,4:26:38.08:38,0,386	0/0:15,0:20:5.99:0,6,50	0/0:10,0:11:3:0,3,26	./.	1/1:11,0:18:5.68:28,6,0	0/0:23,0:23:2.99:0,3,24	0/0:19,0:18:23.81:0,24,277	0/0:18,0:29:15.13:0,15,185	0/1:12,1:20:32.44:32,0,130	0/0:33,0:33:30.02:0,30,347	0/0:22,0:22:1.99:0,2,233	1/1:19,0:25:22.88:124,23,0	0/0:9,0:9:5.78:0,6,35
chr10	108456327	.	C	CTT	10621.85	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=19.483;DP=681;FS=3.644;HRun=1;HaplotypeScore=130.9016;InbreedingCoeff=0.9906;MQ=83.18;MQ0=0;MQRankSum=-16.134;QD=51.07;ReadPosRankSum=-2.800;VQSLOD=4.0107;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:34:96.33:1799,96,0	1/1:0,15:15:42.10:772,42,0	0/0:23,0:23:54.22:0,54,912	0/0:24,0:24:47.81:0,48,761	0/0:34,0:34:99:0,102,1560	0/0:22,0:22:66.22:0,66,1011	0/0:29,0:29:84.25:0,84,1256	1/1:8,22:30:82.83:1555,83,0	0/0:23,0:23:63.21:0,63,963	0/0:27,0:27:78.24:0,78,1141	0/0:16,0:16:48.16:0,48,735	0/0:35,0:35:99:0,105,1607	0/0:19,0:18:54.18:0,54,823	0/0:23,0:22:66.22:0,66,1006	0/0:37,0:37:99:0,108,1652	0/0:36,0:36:99:0,105,1608	1/1:3,11:14:33.11:619,33,0	1/1:1,9:10:24.08:449,24,0	1/1:14,12:26:75.26:1409,75,0	1/1:3,22:25:75.26:1433,75,0	1/1:4,19:23:56.74:966,57,0	0/0:25,0:25:75.25:0,75,1149	0/0:19,0:19:57.19:0,57,873	0/0:28,0:28:84.26:0,84,1256	0/0:20,0:20:60.20:0,60,919	0/0:30,0:30:87.30:0,87,1333	1/1:1,29:31:84.29:1619,84,0	0/0:3,0:3:9.03:0,9,131
chr10	108457053	.	T	TG	6003.95	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=16.530;DP=599;FS=1.104;HRun=2;HaplotypeScore=84.1000;InbreedingCoeff=0.9998;MQ=80.10;MQ0=0;MQRankSum=-5.152;QD=34.70;ReadPosRankSum=-0.744;VQSLOD=4.7018;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:75.25:984,75,0	1/1:3,10:13:31.03:398,31,0	0/0:23,0:22:63.04:0,63,713	0/0:25,0:25:60.61:0,61,677	0/0:23,0:23:69.22:0,69,855	0/0:21,0:20:60.16:0,60,718	0/0:23,0:23:66.21:0,66,816	1/1:0,24:25:75.22:956,75,0	0/0:17,0:17:51.16:0,51,632	0/0:37,0:37:96.30:0,96,1190	0/0:24,0:24:66.19:0,66,806	0/0:22,0:22:63.19:0,63,768	0/0:24,0:24:69.22:0,69,855	0/0:20,0:20:57.17:0,57,694	0/0:20,0:20:60.19:0,60,744	0/0:16,0:16:48.15:0,48,594	1/1:0,13:13:33.11:435,33,0	1/1:0,12:12:33.11:436,33,0	1/1:1,17:18:51.17:666,51,0	1/1:1,22:23:59.84:746,60,0	1/1:1,19:20:57.01:710,57,0	0/0:15,0:15:41.63:0,42,508	0/0:27,0:27:78.24:0,78,967	0/0:19,0:19:54.17:0,54,670	0/0:20,0:20:54.16:0,54,658	0/0:27,0:27:72.21:0,72,871	1/1:1,18:18:51.17:673,51,0	0/0:23,0:23:66.21:0,66,818
chr10	108458902	.	C	CA	4685.23	PASS	AB=0.710;AC=17;AF=0.304;AN=56;BaseQRankSum=14.603;DP=555;FS=10.988;HRun=4;HaplotypeScore=84.6524;InbreedingCoeff=0.9108;MQ=61.47;MQ0=8;MQRankSum=-5.587;QD=24.40;ReadPosRankSum=2.348;VQSLOD=3.3359;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,28:35:81.23:973,81,0	1/1:3,6:9:18.53:219,19,0	0/0:21,0:13:18.54:0,19,312	0/0:34,0:25:58.17:0,58,651	0/0:17,0:17:48.13:0,48,564	0/0:15,0:15:42.13:0,42,504	0/0:22,0:22:63.19:0,63,756	1/1:18,10:25:33.22:431,33,0	0/0:18,0:18:54.17:0,54,648	0/0:14,0:14:39.12:0,39,468	0/0:13,0:13:39.12:0,39,468	0/0:14,0:14:39.12:0,39,468	0/0:14,0:14:39.12:0,39,468	0/0:12,0:12:36.11:0,36,432	0/0:25,0:25:75.23:0,75,900	0/0:21,0:21:60.18:0,60,720	1/1:4,14:18:48.15:590,48,0	1/1:4,10:14:36.54:409,37,0	0/1:13,9:20:33.19:383,0,33	1/1:6,22:28:67.60:795,68,0	1/1:4,5:9:15.74:170,16,0	0/0:25,0:25:72.22:0,72,863	0/0:14,0:14:42.13:0,42,504	0/0:34,0:34:90.26:0,90,1065	0/0:19,0:19:51.16:0,51,612	0/0:20,0:20:54.16:0,54,638	1/1:9,17:26:63.60:716,64,0	0/0:11,0:11:30.56:0,31,360
chr10	108458903	.	AAAC	A	753.62	PASS	AB=0.878;AC=9;AF=0.161;AN=56;BaseQRankSum=5.358;DP=552;FS=5.847;HRun=0;HaplotypeScore=117.3434;InbreedingCoeff=0.0943;MQ=61.48;MQ0=8;MQRankSum=-6.840;QD=4.41;ReadPosRankSum=-7.283;VQSLOD=-0.6158;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,3:35:19.73:20,0,103	0/1:8,1:9:26.76:28,0,27	0/0:21,0:13:24.08:0,24,453	0/0:34,0:26:32.97:0,33,702	0/0:16,0:16:42.14:0,42,871	0/0:14,0:14:36.12:0,36,728	0/0:22,0:22:60.21:0,60,1244	1/1:17,10:24:20.13:461,20,0	0/0:18,0:18:45.15:0,45,930	0/0:15,0:15:39.13:0,39,783	0/0:13,0:13:33.11:0,33,684	0/0:14,0:14:33.11:0,33,683	0/0:14,0:14:30.10:0,30,622	0/0:12,0:12:33.11:0,33,677	0/0:25,0:25:69.22:0,69,1376	0/0:20,0:20:54.18:0,54,1115	0/0:18,0:18:29.21:0,29,91	0/1:12,2:14:16.39:16,0,62	0/1:20,1:19:13.72:66,0,14	0/1:25,3:28:77.54:78,0,100	0/1:5,4:9:12.01:103,0,12	0/0:25,0:25:60.21:0,60,1234	0/0:14,0:14:39.13:0,39,807	0/0:33,0:33:81.28:0,81,1672	0/0:19,0:19:48.16:0,48,994	0/0:21,0:21:54.18:0,54,1065	0/1:21,3:25:70.90:128,0,71	0/0:12,0:12:30.06:0,30,484
chr10	108458906	.	C	CA	4914.55	PASS	AB=0.710;AC=17;AF=0.304;AN=56;BaseQRankSum=16.025;DP=545;FS=5.759;HRun=3;HaplotypeScore=88.7855;InbreedingCoeff=0.9143;MQ=62.64;MQ0=8;MQRankSum=-7.192;QD=26.71;ReadPosRankSum=1.966;VQSLOD=3.8301;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,26:33:90.20:1087,90,0	1/1:2,6:8:22.27:248,22,0	0/0:20,0:12:30.09:0,30,364	0/0:35,0:27:59.46:0,59,712	0/0:16,0:16:45.14:0,45,558	0/0:15,0:15:45.13:0,45,541	0/0:24,0:24:69.18:0,69,829	1/1:19,5:21:42.65:417,43,0	0/0:18,0:18:51.16:0,51,632	0/0:15,0:15:39.12:0,39,483	0/0:13,0:13:39.12:0,39,483	0/0:14,0:14:42.13:0,42,519	0/0:15,0:15:39.10:0,39,468	0/0:13,0:13:36.08:0,36,430	0/0:25,0:25:75.21:0,75,914	0/0:20,0:20:60.19:0,60,744	1/1:6,13:19:47.89:594,48,0	1/1:5,10:15:38.23:426,38,0	0/1:13,9:20:32.78:382,0,33	1/1:6,20:26:69.93:822,70,0	1/1:5,5:10:21.79:215,22,0	0/0:24,0:24:69.22:0,69,853	0/0:14,0:14:42.13:0,42,520	0/0:31,0:31:84.26:0,84,1041	0/0:18,0:18:51.16:0,51,632	0/0:20,0:20:54.17:0,54,667	1/1:6,17:24:64.76:724,65,0	0/0:11,0:11:33.10:0,33,408
chr10	108458973	.	TGTGA	T	1310.91	PASS	AB=0.870;AC=11;AF=0.196;AN=56;BaseQRankSum=10.152;DP=450;FS=3.603;HRun=0;HaplotypeScore=95.0241;InbreedingCoeff=0.2049;MQ=57.90;MQ0=16;MQRankSum=-8.530;QD=9.23;ReadPosRankSum=0.471;VQSLOD=2.4598;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,2:28:64.91:262,0,65	1/1:8,1:9:20.38:204,20,0	0/0:13,0:7:8.86:0,9,96	0/0:22,0:15:20.15:0,20,255	0/0:10,1:11:24.08:0,24,571	0/0:11,0:11:30.09:0,30,707	0/0:30,0:30:86.41:0,86,1962	0/1:17,7:16:99:250,0,427	0/0:17,0:17:48.15:0,48,1120	0/0:15,0:14:42.14:0,42,1017	0/0:10,0:10:30.08:0,30,595	0/0:14,0:14:42.13:0,42,894	0/0:18,0:18:51.16:0,51,1207	0/0:7,0:7:21.07:0,21,519	0/0:14,0:14:42.13:0,42,922	0/0:15,0:15:42.14:0,42,1033	0/1:14,1:15:28.83:69,0,29	0/1:12,3:15:99:148,0,289	0/1:9,1:7:52.55:166,0,53	1/1:6,2:8:12.01:110,12,0	0/1:18,1:18:4.07:4,0,232	0/0:18,0:18:51.15:0,51,1113	0/0:19,0:19:54.13:0,54,1147	0/0:33,0:32:87.28:0,87,1984	0/0:13,0:13:39.12:0,39,914	0/0:17,0:16:45.15:0,45,1111	0/1:8,4:12:39.40:253,0,39	0/0:9,0:9:24.08:0,24,571
chr10	108460981	.	C	CCA	3056.16	PASS	AB=0.996;AC=18;AF=0.321;AN=56;BaseQRankSum=9.672;DP=1026;FS=0.882;HRun=0;HaplotypeScore=175.2361;InbreedingCoeff=0.8083;MQ=53.25;MQ0=83;MQRankSum=-8.279;QD=7.82;ReadPosRankSum=-2.139;VQSLOD=2.9969;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,1:25:39.05:434,39,0	0/1:5,0:5:17.75:29,0,18	0/0:108,0:10:11.97:0,12,95	0/1:133,1:14:16.11:21,0,16	0/0:26,0:23:54.16:0,54,650	0/0:32,0:32:81.18:0,81,981	0/0:36,0:36:69.20:0,69,848	1/1:28,8:30:20.76:533,21,0	0/0:38,0:37:90.24:0,90,1082	0/0:47,0:41:62.31:0,62,878	0/0:12,0:11:30.06:0,30,358	0/0:31,0:32:69.05:0,69,838	0/0:19,0:19:51.16:0,51,631	0/0:45,0:45:69.99:0,70,1072	0/0:31,0:29:52.77:0,53,773	0/0:26,0:27:59.97:0,60,699	1/1:17,5:17:29.98:357,30,0	1/1:18,3:18:8.21:467,8,0	1/1:26,4:14:15.05:219,15,0	1/1:10,0:6:9.03:146,9,0	1/1:66,21:80:42.73:643,43,0	0/0:38,0:35:24.89:0,25,836	0/0:18,0:16:30.08:0,30,357	0/0:54,0:52:99:0,126,1561	0/0:20,0:19:36.07:0,36,433	0/0:29,0:27:51.16:0,51,633	1/1:11,6:14:15.57:411,16,0	0/0:16,0:14:30.10:0,30,374
chr10	108460989	.	ACACAC	A	2131.87	PASS	AB=0.964;AC=10;AF=0.179;AN=56;BaseQRankSum=9.032;DP=1008;FS=0.000;HRun=0;HaplotypeScore=208.3981;InbreedingCoeff=0.0070;MQ=49.44;MQ0=89;MQRankSum=-8.221;QD=8.23;ReadPosRankSum=-2.726;VQSLOD=2.0951;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:21:14.75:570,0,15	0/1:5,0:5:17.75:23,0,18	0/0:111,0:9:18.41:0,18,197	0/0:124,0:10:9.09:0,9,86	0/0:26,0:22:58.99:0,59,1372	0/0:31,0:31:90.31:0,90,2575	0/0:33,0:32:78.24:0,78,2211	0/1:36,0:29:99:213,0,201	0/0:37,0:36:99:0,99,2678	0/0:48,0:37:26.13:0,26,2017	0/0:12,0:11:30.07:0,30,686	0/0:31,0:31:81.27:0,81,2159	0/0:19,0:19:57.19:0,57,1397	0/0:40,0:40:83.07:0,83,2809	0/0:31,0:29:74.06:0,74,1907	0/0:28,0:27:72.15:0,72,1761	0/1:20,1:16:70.45:327,0,70	0/1:23,0:19:66.93:458,0,67	0/1:35,0:17:58.60:74,0,59	1/1:11,3:9:8.80:126,9,0	0/1:84,3:77:88.52:253,0,89	0/0:36,0:33:27.93:0,28,2125	0/0:21,0:16:30.10:0,30,848	0/0:53,0:52:99:0,135,3828	0/0:20,0:19:39.56:0,40,1078	0/0:32,0:29:63.21:0,63,1569	0/1:11,4:12:49.24:235,0,49	0/0:14,0:12:30.10:0,30,889
chr10	108460994	.	C	CACCA	3879.76	PASS	AB=0.725;AC=14;AF=0.250;AN=56;BaseQRankSum=9.884;DP=984;FS=0.000;HRun=0;HaplotypeScore=189.9154;InbreedingCoeff=0.4454;MQ=49.15;MQ0=91;MQRankSum=-9.753;QD=16.30;ReadPosRankSum=-3.204;VQSLOD=2.8258;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,12:19:17.10:917,0,17	0/1:1,3:4:17.75:81,0,18	0/0:118,0:10:6.52:0,7,157	0/0:125,0:11:1.91:0,2,67	0/0:23,0:21:60.19:0,60,1056	0/0:30,0:30:90.31:0,90,1763	0/0:30,0:29:81.10:0,81,1572	0/1:30,0:23:54.33:279,0,54	0/0:40,0:39:99:0,105,1945	0/0:50,0:38:76.42:0,76,1535	0/0:12,0:11:30.07:0,30,509	0/0:29,0:29:87.28:0,87,1584	0/0:21,0:21:63.17:0,63,1060	0/0:35,0:36:70.65:0,71,1914	0/0:26,0:25:45.06:0,45,1350	0/0:30,0:29:74.76:0,75,1300	1/1:11,9:15:4.77:787,5,0	0/1:13,8:17:46.48:957,0,46	1/1:32,0:15:3.74:121,4,0	1/1:16,0:11:9.02:126,9,0	1/1:77,0:67:24.06:396,24,0	0/0:34,0:31:30.94:0,31,1490	0/0:19,0:15:33.11:0,33,629	0/0:54,0:53:99:0,138,2713	0/0:20,0:19:39.08:0,39,747	0/0:31,0:28:69.22:0,69,1232	1/1:16,0:13:0.49:215,0,0	0/0:13,0:11:33.11:0,33,661
chr10	108461003	.	ACACACACACCACAAACACAC	A	2202.82	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=10.287;DP=967;FS=6.067;HRun=0;HaplotypeScore=375.5901;InbreedingCoeff=0.4670;MQ=49.44;MQ0=93;MQRankSum=-7.127;QD=10.34;ReadPosRankSum=-3.432;VQSLOD=0.7822;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:18:48.13:48,0,81	0/0:3,0:2:2.04:0,2,6	0/0:117,0:9:6.37:0,6,47	0/0:123,0:14:2.53:0,3,244	0/0:23,0:20:57.18:0,57,3039	0/0:31,0:32:84.29:0,84,5253	0/0:33,0:33:83.84:0,84,3823	1/1:20,17:27:10.63:808,11,0	0/0:38,0:36:87.30:0,87,4953	0/0:48,0:37:47.25:0,47,4324	0/0:10,0:9:24.08:0,24,1446	0/0:28,0:28:81.24:0,81,4131	0/0:20,0:19:48.16:0,48,3060	0/0:37,0:37:73.93:0,74,5046	0/0:29,0:27:62.63:0,63,4361	0/0:28,0:27:65.99:0,66,3923	0/1:17,0:15:12.87:13,0,42	0/1:14,0:15:0.84:1,0,162	1/1:24,0:10:17.89:425,18,0	0/0:14,5:12:2.13:0,2,4	0/1:70,0:63:42.53:96,0,43	0/0:31,0:28:50.12:0,50,3426	0/0:19,0:15:27.09:0,27,1297	0/0:54,0:54:99:0,119,6939	0/0:19,0:17:39.12:0,39,1645	0/0:28,0:26:54.10:0,54,2173	1/1:16,0:14:30.56:963,31,0	0/0:13,0:11:33.11:0,33,2100
chr10	108461011	.	ACCACAAACACAC	A	804.85	PASS	AB=0.982;AC=8;AF=0.143;AN=56;BaseQRankSum=9.742;DP=956;FS=0.000;HRun=0;HaplotypeScore=286.8647;InbreedingCoeff=0.4046;MQ=49.30;MQ0=90;MQRankSum=-5.894;QD=3.03;ReadPosRankSum=-2.593;VQSLOD=1.6787;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:14:2.05:2,0,144	0/0:2,0:1:2.97:0,3,20	0/0:110,0:8:17.35:0,17,140	0/1:105,0:10:12.87:13,0,330	0/0:27,0:25:75.24:0,75,2921	0/0:35,0:35:99:0,99,4601	0/0:35,0:34:96.10:0,96,3572	1/1:33,0:26:15.58:180,16,0	0/0:40,0:38:99:0,102,4431	0/0:50,0:38:99:0,100,4159	0/0:11,0:10:27.09:0,27,1217	0/0:34,0:34:99:0,99,3905	0/0:20,0:19:57.15:0,57,2544	0/0:41,0:41:86.08:0,86,4798	0/0:31,0:29:70.04:0,70,3781	0/0:27,0:26:68.76:0,69,3372	0/0:16,0:15:10.35:0,10,215	0/0:15,0:14:13.73:0,14,171	0/1:24,0:10:24.10:158,0,24	0/0:16,3:12:2:0,2,5	0/1:66,3:58:21.14:123,0,21	0/0:33,0:30:73.13:0,73,3262	0/0:21,0:19:45.15:0,45,1594	0/0:52,0:51:99:0,134,5872	0/0:18,0:16:42.13:0,42,1658	0/0:31,0:29:72.07:0,72,2282	1/1:8,4:12:27.34:468,27,0	0/0:16,0:15:45.15:0,45,1945
chr10	108461015	.	CAA	C	710.02	PASS	AB=0.980;AC=11;AF=0.196;AN=56;BaseQRankSum=10.164;DP=889;FS=3.475;HRun=3;HaplotypeScore=156.6111;InbreedingCoeff=0.1668;MQ=50.32;MQ0=72;MQRankSum=-8.353;QD=1.91;ReadPosRankSum=-0.998;VQSLOD=-0.7054;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:12:44.40:76,0,44	0/1:2,0:1:0:0,0,0	0/1:108,0:9:5.36:5,0,120	0/1:105,0:12:20.85:21,0,204	0/0:30,0:27:67.25:0,67,1345	0/0:34,0:34:99:0,99,1847	0/0:35,0:34:94.82:0,95,1715	0/1:28,0:22:1.54:188,0,2	0/0:34,0:33:96.31:0,96,1774	0/0:45,0:36:77.82:0,78,1706	0/0:11,0:10:27.09:0,27,513	0/0:31,0:31:93.29:0,93,1700	0/0:22,0:21:63.11:0,63,1062	0/0:41,0:41:99:0,114,2012	0/0:29,0:29:87.23:0,87,1570	0/0:26,0:25:65.71:0,66,1178	0/1:14,2:15:43.14:43,0,126	0/1:12,0:11:33.86:40,0,34	0/1:18,1:9:6.28:111,0,6	0/0:14,2:12:2.69:0,3,7	0/1:54,0:47:46.08:110,0,46	0/0:30,0:28:59.27:0,59,1336	0/0:20,1:19:45.09:0,45,783	0/0:52,0:51:99:0,138,2468	0/0:17,0:15:45.14:0,45,794	0/0:28,0:25:69.05:0,69,1144	1/1:10,0:10:26.27:261,26,0	0/0:15,0:15:45.15:0,45,853
chr10	108461018	.	ACACAC	A	638.67	PASS	AB=0.941;AC=9;AF=0.167;AN=54;BaseQRankSum=8.361;DP=892;FS=1.610;HRun=0;HaplotypeScore=189.0908;InbreedingCoeff=-0.1100;MQ=50.48;MQ0=68;MQRankSum=-5.041;QD=1.77;ReadPosRankSum=-0.292;VQSLOD=2.8610;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,5:12:56.89:211,0,57	./.	0/1:106,0:9:13.95:14,0,138	0/1:101,0:11:55.20:55,0,421	0/0:29,0:27:52.38:0,52,2089	0/0:32,0:32:95.81:0,96,2713	0/0:38,0:38:99:0,108,2727	0/0:30,0:23:27.29:0,27,137	0/0:35,0:34:96.33:0,96,2748	0/0:42,0:35:93.06:0,93,2696	0/0:11,0:10:27.09:0,27,765	0/0:31,0:31:88.61:0,89,2487	0/0:24,0:23:66.23:0,66,1817	0/0:39,0:39:99:0,108,3041	0/0:30,0:30:87.30:0,87,2491	0/0:25,0:24:63.17:0,63,1893	0/1:15,1:15:99:127,0,201	0/1:9,3:11:85.73:243,0,86	0/1:19,0:10:15.43:15,0,83	0/1:16,0:13:0.25:0,0,0	0/1:59,1:53:46.77:47,0,77	0/0:28,0:27:69.24:0,69,2023	0/0:22,0:19:42.14:0,42,1230	0/0:52,0:51:99:0,126,3639	0/0:18,0:16:42.14:0,42,1176	0/0:28,0:25:66.12:0,66,1725	0/1:12,0:11:58.84:59,0,80	0/0:15,0:15:45.15:0,45,1299
chr10	108461019	.	CA	C	159.49	PASS	AB=0.849;AC=5;AF=0.089;AN=56;BaseQRankSum=8.445;DP=888;FS=8.856;HRun=3;HaplotypeScore=149.3229;InbreedingCoeff=0.0297;MQ=50.79;MQ0=66;MQRankSum=-6.137;QD=1.18;ReadPosRankSum=1.217;VQSLOD=-0.6530;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:13:11.17:0,11,100	0/0:3,0:2:5.23:0,5,39	0/0:100,2:9:17.54:0,18,156	0/0:98,0:11:16.72:0,17,280	0/0:29,0:27:78.25:0,78,1210	0/0:32,0:32:96.32:0,96,1519	0/0:38,0:38:99:0,105,1634	0/1:28,1:23:72.11:72,0,140	0/0:37,0:36:99:0,108,1624	0/0:41,0:34:96.31:0,96,1517	0/0:12,0:11:27.09:0,27,431	0/0:31,0:31:91.19:0,91,1436	0/0:24,0:23:69.22:0,69,1069	0/0:39,0:39:99:0,108,1723	0/0:32,0:32:87.30:0,87,1387	0/0:24,0:23:63.21:0,63,1004	0/0:16,0:15:24.87:0,25,318	0/0:12,0:11:15.12:0,15,207	0/1:17,2:10:37.17:52,0,37	0/1:12,3:12:0.21:0,0,0	0/1:44,16:53:55.20:55,0,70	0/0:27,0:26:72.23:0,72,1127	0/0:24,0:21:48.13:0,48,708	0/0:52,0:51:99:0,141,2171	0/0:18,0:16:48.15:0,48,741	0/0:28,0:25:69.20:0,69,1052	0/1:8,4:11:43.99:88,0,44	0/0:16,0:16:45.15:0,45,719
chr10	108461023	.	C	CCA	1330.16	PASS	AB=0.960;AC=12;AF=0.214;AN=56;BaseQRankSum=8.948;DP=884;FS=5.284;HRun=0;HaplotypeScore=159.9467;InbreedingCoeff=0.4926;MQ=51.82;MQ0=53;MQRankSum=-6.403;QD=4.96;ReadPosRankSum=-2.706;VQSLOD=2.6262;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:11:0.63:7,0,1	0/0:3,0:2:2.22:0,2,7	0/1:91,0:10:8.56:9,0,86	0/0:90,0:12:0.10:0,0,142	0/0:31,0:29:72.16:0,72,877	0/0:33,0:32:38.29:0,38,990	0/0:38,0:38:95.75:0,96,1119	1/1:27,0:22:43.03:585,43,0	0/0:39,0:38:99:0,99,1221	0/0:45,0:38:86.90:0,87,1072	0/0:11,0:11:27.09:0,27,342	0/0:32,0:32:77.61:0,78,954	0/0:26,0:25:63.20:0,63,799	0/0:40,0:40:93.28:0,93,1166	0/0:33,0:33:84.23:0,84,1048	0/0:25,0:25:66.19:0,66,828	0/1:15,0:13:27.89:71,0,28	0/1:9,0:8:7.90:29,0,8	1/1:19,1:11:15.04:189,15,0	0/1:15,0:12:0:0,0,0	0/1:55,4:57:6.09:361,0,6	0/0:27,0:26:60.18:0,60,749	0/0:25,0:22:48.15:0,48,606	0/0:52,0:53:99:0,109,1417	0/0:20,0:18:36.11:0,36,453	0/0:28,0:27:57.15:0,57,690	1/1:12,0:11:24.32:237,24,0	0/0:16,0:16:39.12:0,39,495
chr10	108461039	.	CATAT	C	256.37	PASS	AB=0.697;AC=6;AF=0.107;AN=56;BaseQRankSum=8.618;DP=879;FS=4.063;HRun=0;HaplotypeScore=182.6892;InbreedingCoeff=0.4905;MQ=52.11;MQ0=30;MQRankSum=-6.681;QD=6.41;ReadPosRankSum=-1.653;VQSLOD=2.6623;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,2:10:10.18:104,10,0	1/1:1,0:1:2.96:19,3,0	0/0:60,0:7:8.42:0,8,252	0/0:73,0:12:16.22:0,16,349	0/0:30,0:28:81.26:0,81,2244	0/0:34,0:33:71.38:0,71,2352	0/0:41,0:41:99:0,109,2994	0/0:30,0:28:61.45:0,61,1606	0/0:40,0:40:99:0,114,3067	0/0:45,2:45:66.67:0,67,3141	0/0:15,0:15:36.12:0,36,1004	0/0:35,0:35:97.90:0,98,2691	0/0:33,0:33:99:0,99,2667	0/0:34,0:34:99:0,99,2763	0/0:35,0:35:99:0,102,2873	0/0:30,0:30:87.07:0,87,2417	0/1:10,3:12:99:147,0,225	0/1:5,1:8:87.49:106,0,87	0/0:20,1:17:31.60:0,32,885	0/0:21,0:21:26.67:0,27,706	0/0:83,0:82:80.50:0,81,2296	0/0:26,0:26:72.21:0,72,2000	0/0:25,0:22:51.17:0,51,1444	0/0:53,0:52:99:0,136,3946	0/0:15,0:14:35.87:0,36,1012	0/0:29,0:28:78.27:0,78,2136	0/0:11,0:10:11.23:0,11,516	0/0:17,0:17:51.18:0,51,1432
chr10	108461046	.	CA	C	183.53	PASS	AB=0.807;AC=5;AF=0.089;AN=56;BaseQRankSum=7.794;DP=901;FS=4.133;HRun=1;HaplotypeScore=149.6410;InbreedingCoeff=0.3719;MQ=53.16;MQ0=28;MQRankSum=-7.185;QD=4.71;ReadPosRankSum=-0.890;VQSLOD=0.1332;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,2:11:0:66,0,0	1/1:1,0:1:3.01:33,3,0	0/0:56,0:9:5.56:0,6,183	0/0:70,0:15:20.93:0,21,249	0/0:31,0:30:75.23:0,75,1164	0/0:33,0:32:90.28:0,90,1393	0/0:41,0:41:99:0,107,1719	0/0:32,0:30:76.49:0,76,1116	0/0:44,0:44:99:0,126,1980	0/0:48,0:46:99:0,126,1948	0/0:14,0:14:33.10:0,33,494	0/0:37,0:37:99:0,103,1594	0/0:33,0:33:99:0,99,1581	0/0:32,0:32:90.31:0,90,1419	0/0:36,0:36:99:0,105,1648	0/0:33,0:33:96.27:0,96,1463	0/1:10,3:10:54.69:55,0,117	0/1:7,4:8:71.37:142,0,71	0/0:27,0:22:46.25:0,46,719	0/0:23,0:23:32.79:0,33,527	0/0:92,0:91:92.06:0,92,1477	0/0:25,0:25:68.98:0,69,1082	0/0:24,0:22:54.18:0,54,842	0/0:55,0:54:99:0,147,2288	0/0:17,0:17:42.14:0,42,648	0/0:30,0:30:90.28:0,90,1375	0/0:12,0:11:27.56:0,28,422	0/0:17,0:17:51.17:0,51,764
chr10	108461050	.	CACAT	C	295.81	PASS	AB=0.932;AC=8;AF=0.143;AN=56;BaseQRankSum=8.208;DP=919;FS=3.926;HRun=0;HaplotypeScore=191.1632;InbreedingCoeff=0.3703;MQ=52.32;MQ0=29;MQRankSum=-7.206;QD=1.72;ReadPosRankSum=-2.727;VQSLOD=2.4300;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,1:15:16.54:114,17,0	1/1:1,0:1:3.01:32,3,0	0/1:60,0:9:22.85:23,0,242	0/1:61,0:12:2.33:2,0,226	0/0:35,0:34:90.12:0,90,1995	0/0:32,0:31:87.28:0,87,2212	0/0:41,0:41:99:0,108,2755	0/0:33,0:31:83.26:0,83,1918	0/0:44,0:44:99:0,129,3095	0/0:47,0:45:99:0,114,2974	0/0:13,0:13:30.10:0,30,758	0/0:40,0:40:99:0,103,2477	0/0:35,0:35:99:0,105,2650	0/0:32,0:32:84.27:0,84,2161	0/0:34,0:34:96.25:0,96,2235	0/0:34,0:34:96.24:0,96,2233	0/1:13,3:12:95.97:112,0,96	0/1:10,0:8:65.58:145,0,66	0/0:30,0:25:49.45:0,49,1253	0/0:23,0:23:36.09:0,36,918	0/0:95,0:94:79.38:0,79,2441	0/0:24,1:25:66.21:0,66,1697	0/0:24,0:22:54.05:0,54,1350	0/0:55,0:54:99:0,129,3211	0/0:17,0:17:45:0,45,1015	0/0:32,0:32:96.25:0,96,2295	0/0:12,0:11:24.55:0,25,607	0/0:13,0:13:39.11:0,39,997
chr10	108461052	.	CAT	C	185.23	PASS	AB=0.971;AC=8;AF=0.143;AN=56;BaseQRankSum=7.706;DP=900;FS=10.237;HRun=0;HaplotypeScore=157.7729;InbreedingCoeff=0.4086;MQ=52.66;MQ0=30;MQRankSum=-5.963;QD=1.12;ReadPosRankSum=-1.058;VQSLOD=2.1000;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,3:12:10.47:70,10,0	1/1:0,1:1:3.01:45,3,0	0/1:59,0:9:14.01:14,0,149	0/1:65,1:11:8.97:9,0,124	0/0:33,0:32:90.05:0,90,1464	0/0:31,0:30:84.22:0,84,1522	0/0:40,0:40:99:0,99,1923	0/0:33,0:31:84.05:0,84,1354	0/0:45,0:45:99:0,126,2131	0/0:43,0:43:99:0,117,2091	0/0:14,0:14:33.08:0,33,565	0/0:36,0:36:99:0,104,1753	0/0:35,0:35:99:0,105,1853	0/0:30,0:30:84.27:0,84,1533	0/0:33,0:33:81.23:0,81,1455	0/0:33,0:33:90.22:0,90,1546	0/1:16,0:12:6.21:108,0,6	0/1:8,1:7:8.49:72,0,8	0/0:26,1:21:45.46:0,45,894	0/0:23,0:23:35.87:0,36,657	0/0:95,1:95:85.47:0,85,1752	0/0:25,0:25:69.14:0,69,1212	0/0:25,0:23:57.02:0,57,967	0/0:53,0:52:99:0,132,2271	0/0:18,0:18:36.91:0,37,688	0/0:33,0:33:99:0,99,1670	0/0:13,0:12:27.55:0,28,466	0/0:13,0:13:39.11:0,39,708
chr10	108461053	.	ATAC	A	32.36	PASS	AB=0.971;AC=4;AF=0.071;AN=56;BaseQRankSum=6.535;DP=910;FS=10.932;HRun=0;HaplotypeScore=171.7233;InbreedingCoeff=0.2670;MQ=52.48;MQ0=32;MQRankSum=-5.570;QD=1.24;ReadPosRankSum=-0.567;VQSLOD=2.1172;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,1:12:6.83:0,7,85	1/1:1,0:1:2.60:10,3,0	0/0:61,0:9:17.59:0,18,207	0/0:64,0:11:10.43:0,10,195	0/0:33,0:32:90.27:0,90,1977	0/0:30,0:29:84.20:0,84,1931	0/0:41,0:41:98.53:0,99,2601	0/0:32,0:31:84.24:0,84,1892	0/0:44,0:44:99:0,126,2948	0/0:46,0:44:99:0,120,2807	0/0:15,0:15:36.11:0,36,808	0/0:35,1:36:99:0,102,2398	0/0:36,0:36:99:0,108,2462	0/0:29,1:30:84.14:0,84,1907	0/0:33,0:33:81.25:0,81,1891	0/0:33,0:33:90.22:0,90,2092	0/1:15,1:12:38.26:90,0,38	0/1:9,0:7:29.37:29,0,63	0/0:27,0:21:49.73:0,50,1214	0/0:23,0:23:36.01:0,36,875	0/0:98,1:98:90.03:0,90,2478	0/0:25,0:25:69:0,69,1621	0/0:26,0:24:60.16:0,60,1340	0/0:52,0:51:99:0,113,3002	0/0:18,0:18:41.74:0,42,994	0/0:33,0:33:99:0,99,2324	0/0:13,0:12:27.56:0,28,622	0/0:13,0:13:39.13:0,39,891
chr10	108461069	.	ACACAC	A	330.57	PASS	AB=0.962;AC=6;AF=0.107;AN=56;BaseQRankSum=7.857;DP=995;FS=8.855;HRun=0;HaplotypeScore=199.4047;InbreedingCoeff=0.5155;MQ=52.71;MQ0=46;MQRankSum=-7.283;QD=7.19;ReadPosRankSum=-1.567;VQSLOD=1.1053;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,2:13:10.81:197,11,0	1/1:0,1:1:3.01:50,3,0	0/0:75,0:12:19.63:0,20,322	0/0:66,0:6:14.98:0,15,272	0/0:29,0:27:65.91:0,66,1948	0/0:31,0:31:87.25:0,87,2082	0/0:40,0:40:99:0,117,3200	0/0:35,0:34:55.51:0,56,2274	0/0:44,0:44:99:0,123,3514	0/0:49,0:45:99:0,123,3438	0/0:24,0:23:57.19:0,57,1617	0/0:40,0:40:99:0,107,3207	0/0:35,0:35:99:0,102,2925	0/0:33,0:33:87.30:0,87,2421	0/0:32,0:32:90.31:0,90,2592	0/0:30,0:30:87.30:0,87,2497	0/1:18,0:14:73.36:81,0,73	0/1:11,1:9:58.70:124,0,59	0/0:43,0:33:83.94:0,84,2219	0/0:28,0:28:54.11:0,54,1647	0/0:110,0:106:99:0,134,3705	0/0:30,0:29:72.23:0,72,2110	0/0:28,0:26:69.24:0,69,2066	0/0:55,0:54:99:0,141,4059	0/0:27,0:26:60.09:0,60,1675	0/0:36,0:34:99:0,102,2998	0/0:13,0:12:23.82:0,24,615	0/0:14,0:14:36.12:0,36,1127
chr10	108461074	.	C	CACACA	1500.16	PASS	AB=0.576;AC=7;AF=0.125;AN=56;BaseQRankSum=6.791;DP=1024;FS=8.169;HRun=0;HaplotypeScore=207.8772;InbreedingCoeff=0.7242;MQ=53.23;MQ0=42;MQRankSum=-7.130;QD=31.92;ReadPosRankSum=0.742;VQSLOD=2.5076;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,6:12:24.91:839,25,0	1/1:1,0:1:3.01:92,3,0	0/0:74,0:11:14.82:0,15,268	0/0:71,0:6:15.03:0,15,221	0/0:28,0:26:67.11:0,67,1491	0/0:28,0:28:78.21:0,78,1534	0/0:41,0:40:99:0,113,2401	0/0:35,0:34:65.30:0,65,1881	0/0:44,0:44:99:0,123,2662	0/0:49,0:46:99:0,126,2656	0/0:28,0:27:63.11:0,63,1307	0/0:40,0:41:99:0,114,2518	0/0:35,0:35:99:0,99,2161	0/0:35,0:35:93.13:0,93,1974	0/0:35,0:36:93.32:0,93,2028	0/0:33,0:33:90.28:0,90,1942	0/1:5,9:15:65.13:276,0,65	1/1:6,4:10:6.26:425,6,0	0/0:44,0:36:85.69:0,86,1862	0/0:29,0:29:53.18:0,53,1253	0/0:118,0:114:99:0,153,3082	0/0:30,0:29:78.21:0,78,1661	0/0:27,0:25:69.24:0,69,1574	0/0:60,0:59:83.76:0,84,3151	0/0:25,0:25:63.21:0,63,1322	0/0:39,0:37:99:0,99,2243	0/0:11,0:11:26.79:0,27,499	0/0:15,0:15:36.12:0,36,839
chr10	108461410	.	CCA	C	1717.18	PASS	AB=0.980;AC=16;AF=0.308;AN=52;BaseQRankSum=5.383;DP=775;FS=0.570;HRun=0;HaplotypeScore=121.1285;InbreedingCoeff=0.1647;MQ=35.19;MQ0=247;MQRankSum=-2.049;QD=4.26;ReadPosRankSum=0.712;VQSLOD=2.9486;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,3:25:19.38:236,19,0	1/1:9,0:6:2.87:15,3,0	./.	./.	0/1:20,0:9:7.54:8,0,60	0/0:24,0:17:20.41:0,20,211	0/1:42,0:27:4.17:4,0,344	1/1:41,10:20:1.87:311,2,0	0/0:22,0:14:30.08:0,30,401	0/0:31,0:18:7.89:0,8,272	0/0:19,0:11:17.88:0,18,222	0/0:23,0:11:17.99:0,18,234	0/0:21,0:10:12.02:0,12,158	0/0:21,0:12:12.51:0,13,155	0/0:25,0:9:7.70:0,8,232	0/0:21,0:16:16.78:0,17,343	0/1:34,2:25:99:205,0,107	0/1:32,0:26:41.95:363,0,42	0/1:35,1:18:35.52:106,0,36	0/1:20,0:10:22.78:100,0,23	0/1:71,7:60:99:427,0,125	0/0:24,0:12:6.49:0,6,95	0/0:20,0:9:6.02:0,6,91	0/0:58,0:45:56.15:0,56,730	0/1:22,0:15:5.03:5,0,207	0/0:31,0:18:27.07:0,27,337	1/1:20,0:11:9.45:95,9,0	0/0:17,0:9:20.13:0,20,286
chr10	108461438	.	CACACA	C	841.30	PASS	AB=0.877;AC=8;AF=0.154;AN=52;BaseQRankSum=7.234;DP=732;FS=35.312;HRun=0;HaplotypeScore=142.2414;InbreedingCoeff=0.0395;MQ=33.63;MQ0=196;MQRankSum=-8.131;QD=4.43;ReadPosRankSum=-0.771;VQSLOD=1.2952;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,15:30:86.63:304,0,87	1/1:5,5:7:5.88:84,6,0	./.	./.	0/1:12,0:5:10.58:11,0,32	0/0:29,0:20:10.03:0,10,322	0/0:53,0:35:45.95:0,46,741	0/0:53,0:32:29.21:0,29,452	0/0:18,0:13:30.10:0,30,423	0/0:21,0:14:36.36:0,36,549	0/0:14,0:9:15.45:0,15,256	0/0:17,0:11:12.92:0,13,164	0/0:15,0:7:8.21:0,8,109	0/0:22,0:13:13.29:0,13,217	0/0:26,0:14:17.87:0,18,234	0/1:21,0:16:3.98:4,0,398	0/1:40,4:29:99:371,0,313	0/1:24,6:25:98.18:98,0,266	0/1:20,0:13:96.40:96,0,230	0/0:17,0:11:15.05:0,15,204	0/0:68,0:58:56.19:0,56,726	0/0:17,0:11:13.65:0,14,222	0/0:17,0:10:14.94:0,15,243	0/0:52,0:38:20.52:0,21,934	0/0:25,0:18:7.34:0,7,434	0/0:30,0:21:45.47:0,45,684	0/0:8,0:5:5.71:0,6,45	0/0:19,0:12:24.79:0,25,512
chr10	108461670	.	CA	C	5091.08	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.003;DP=805;FS=3.635;HRun=1;HaplotypeScore=82.0704;InbreedingCoeff=0.9995;MQ=70.72;MQ0=2;MQRankSum=-0.077;QD=32.43;ReadPosRankSum=0.779;VQSLOD=4.5394;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:99:0,135,1892	0/0:11,0:11:32.98:0,33,415	0/0:33,0:30:87.20:0,87,1112	0/0:34,0:29:84.17:0,84,1076	0/0:24,0:24:69.14:0,69,918	0/0:22,0:22:63.12:0,63,856	0/0:33,0:33:93.09:0,93,1238	1/1:0,27:27:78.15:958,78,0	0/0:29,0:29:87.23:0,87,1169	0/0:33,0:33:99:0,99,1386	0/0:12,0:12:33.11:0,33,462	0/0:41,0:41:99:0,123,1674	0/0:26,0:26:78.24:0,78,1086	0/0:24,0:24:58.98:0,59,875	0/0:41,0:41:99:0,114,1560	0/0:33,0:33:90.23:0,90,1226	0/0:31,0:30:87.16:0,87,1174	0/0:22,0:20:57.14:0,57,777	1/1:1,15:14:42.08:541,42,0	1/1:1,21:21:57.10:732,57,0	1/1:1,70:69:99:2295,166,0	0/0:20,0:20:60.17:0,60,812	0/0:20,0:19:54.18:0,54,788	0/0:42,0:42:99:0,123,1667	0/0:19,0:18:54.10:0,54,730	0/0:38,0:38:99:0,111,1459	1/1:1,20:21:25.16:565,25,0	0/0:12,0:12:36.10:0,36,505
chr10	108462076	.	GGTGT	G	1202.63	PASS	AB=0.914;AC=11;AF=0.196;AN=56;BaseQRankSum=5.195;DP=857;FS=0.000;HRun=0;HaplotypeScore=140.3290;InbreedingCoeff=0.1158;MQ=48.36;MQ0=67;MQRankSum=-6.273;QD=4.59;ReadPosRankSum=0.457;VQSLOD=2.6014;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,6:28:88.67:130,0,89	1/1:4,1:7:2.92:44,3,0	0/0:26,0:10:3.01:0,3,70	0/1:28,0:9:1.55:2,0,94	0/0:21,0:19:24.08:0,24,582	0/0:26,0:23:50.64:0,51,1076	0/0:48,0:47:99:0,111,2308	0/1:37,2:24:19.57:343,0,20	0/0:24,0:21:25.30:0,25,1020	0/0:59,0:47:62.83:0,63,1329	0/0:16,0:14:23.98:0,24,504	0/0:43,0:40:50.32:0,50,1651	0/0:28,0:23:44.91:0,45,956	0/0:34,0:34:62.81:0,63,1264	0/0:43,0:40:71.70:0,72,1455	0/0:20,0:19:33.11:0,33,802	0/1:23,3:25:52.89:261,0,53	0/1:18,1:15:18.33:132,0,18	0/1:22,1:18:38.91:178,0,39	0/0:22,3:19:3.01:0,3,32	1/1:57,5:48:8.70:86,9,0	0/0:25,0:23:32.83:0,33,679	0/0:25,0:20:23.86:0,24,552	0/0:41,0:41:42.57:0,43,1560	0/0:26,0:24:19.11:0,19,903	0/0:41,0:39:69.06:0,69,1327	0/1:12,4:13:25.04:172,0,25	0/0:10,0:8:12.04:0,12,263
chr10	108462144	.	GGTGTGT	G	1125.39	PASS	AB=0.958;AC=12;AF=0.214;AN=56;BaseQRankSum=5.219;DP=940;FS=0.671;HRun=0;HaplotypeScore=166.1491;InbreedingCoeff=0.1937;MQ=38.92;MQ0=155;MQRankSum=-7.076;QD=3.22;ReadPosRankSum=-1.352;VQSLOD=2.6145;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:39,2:26:17.62:76,0,18	0/1:9,0:7:2.80:35,0,3	0/0:56,0:4:7.24:0,7,102	0/1:64,0:5:0:0,0,0	0/0:17,0:12:17.23:0,17,556	0/0:26,0:17:29.58:0,30,747	0/0:57,0:46:97.98:0,98,2634	0/1:43,0:21:23.54:567,0,24	0/0:26,0:22:59.41:0,59,1664	0/0:60,0:33:74.88:0,75,1510	0/0:20,0:15:19.22:0,19,458	0/0:38,0:33:59.37:0,59,1929	0/0:28,0:24:56.56:0,57,1343	0/0:31,0:26:48.02:0,48,1623	0/0:35,0:30:66.20:0,66,1848	0/0:31,0:24:57.19:0,57,1610	0/1:22,0:18:99:157,0,173	0/1:14,1:11:83.24:83,0,230	0/1:33,0:12:44.22:44,0,51	1/1:18,2:15:3.01:45,3,0	0/1:75,1:56:28.44:36,0,28	0/0:30,0:22:36.12:0,36,1084	0/0:19,0:15:21.02:0,21,614	0/0:46,0:42:93.06:0,93,2786	0/0:20,0:18:31.96:0,32,712	0/0:33,0:25:51.93:0,52,1607	1/1:9,5:10:7.92:229,8,0	0/0:13,0:9:19.88:0,20,580
chr10	108462151	.	GTGT	G	212.01	PASS	AB=0.972;AC=8;AF=0.143;AN=56;BaseQRankSum=7.755;DP=990;FS=12.222;HRun=0;HaplotypeScore=146.9910;InbreedingCoeff=0.1233;MQ=37.70;MQ0=191;MQRankSum=-7.305;QD=0.77;ReadPosRankSum=-0.751;VQSLOD=2.1229;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:43,1:27:28.35:28,0,139	0/1:12,0:9:4.10:49,0,4	0/0:52,0:3:9.03:0,9,149	0/0:61,0:4:1.63:0,2,36	0/0:18,0:10:16.08:0,16,427	0/0:27,0:17:38.06:0,38,787	0/0:59,0:49:82.11:0,82,2518	0/1:51,0:22:39.90:40,0,348	0/0:28,0:24:60.04:0,60,1391	0/0:59,0:29:76:0,76,1659	0/0:21,0:16:19.22:0,19,406	0/0:40,0:32:77.94:0,78,1631	0/0:29,0:25:57.83:0,58,1190	0/0:33,0:28:69.66:0,70,1469	0/0:39,0:30:71.97:0,72,1581	0/0:29,0:22:57.20:0,57,1352	0/1:26,2:23:99:152,0,356	0/0:23,0:13:28.44:0,28,353	0/1:41,0:10:22.50:23,0,155	0/0:16,0:12:2.60:0,3,11	0/1:81,0:54:3.35:3,0,154	0/0:31,0:22:48.63:0,49,985	0/0:21,0:17:26.58:0,27,548	0/0:51,0:44:99:0,108,2410	0/0:21,1:20:36.59:0,37,748	0/0:36,0:25:75.08:0,75,1554	1/1:14,0:10:6.40:47,6,0	0/0:16,0:10:20.95:0,21,426
chr10	108462249	.	GGT	G	2596.31	PASS	AB=0.914;AC=12;AF=0.214;AN=56;BaseQRankSum=5.038;DP=883;FS=0.421;HRun=0;HaplotypeScore=157.5846;InbreedingCoeff=0.5646;MQ=53.45;MQ0=25;MQRankSum=-3.591;QD=6.89;ReadPosRankSum=-0.387;VQSLOD=2.8314;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:23:47.19:0,47,719	0/0:13,0:13:30.10:0,30,470	0/1:82,0:16:17.83:18,0,51	0/1:80,0:22:11.42:11,0,186	0/0:13,0:13:30.10:0,30,450	0/0:22,0:22:63.20:0,63,1012	0/0:52,0:52:90.88:0,91,1971	1/1:16,19:31:60.19:745,60,0	0/0:27,0:27:41.92:0,42,879	0/0:36,0:31:72.24:0,72,1142	0/0:11,0:11:24.08:0,24,395	0/0:38,1:37:20.51:0,21,1172	0/0:16,1:17:4.61:0,5,589	0/0:25,0:25:53.06:0,53,872	0/1:17,1:16:7.44:7,0,372	0/0:20,0:20:43.96:0,44,678	0/0:25,0:25:47.19:0,47,671	0/0:11,0:9:24.08:0,24,354	0/1:16,11:20:70.87:266,0,71	1/1:10,9:19:42.13:513,42,0	1/1:42,64:101:63.59:1057,64,0	0/0:28,1:29:28.69:0,29,963	0/0:21,0:20:35.95:0,36,559	0/0:52,1:51:76.83:0,77,1723	0/0:14,0:14:33.09:0,33,498	0/0:34,0:33:54.48:0,54,1125	1/1:2,4:6:12.04:150,12,0	0/0:17,0:17:35.53:0,36,586
chr10	108462271	.	ATGTGG	A	699.08	PASS	AB=0.752;AC=5;AF=0.089;AN=56;BaseQRankSum=4.128;DP=888;FS=4.489;HRun=0;HaplotypeScore=190.7865;InbreedingCoeff=0.3338;MQ=53.12;MQ0=34;MQRankSum=-2.117;QD=10.59;ReadPosRankSum=0.127;VQSLOD=2.7089;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,8:22:5.21:162,0,5	1/1:6,7:12:9.03:174,9,0	0/0:80,0:15:8.01:0,8,189	0/0:97,0:21:26.87:0,27,521	0/0:13,0:13:30.10:0,30,833	0/0:24,0:23:51.09:0,51,1314	0/0:60,0:60:99:0,106,3062	0/0:35,0:30:42.13:0,42,1053	0/0:23,0:22:33.11:0,33,900	0/0:35,0:31:78.27:0,78,2114	0/0:13,0:13:24.07:0,24,514	0/0:39,0:37:81.28:0,81,2247	0/0:20,0:20:42.10:0,42,1135	0/0:24,0:24:50.53:0,51,1344	0/0:23,0:20:45.11:0,45,1119	0/0:17,0:17:42.14:0,42,1120	0/1:10,5:15:30.74:303,0,31	0/1:7,4:9:56.19:177,0,56	0/0:27,0:18:36.08:0,36,801	0/0:18,0:18:36.12:0,36,943	0/0:96,0:85:53.12:0,53,1439	0/0:29,0:29:66.23:0,66,1755	0/0:22,0:20:48.15:0,48,1314	0/0:55,0:53:99:0,119,3201	0/0:14,0:14:33.09:0,33,870	0/0:35,0:34:72.25:0,72,2000	0/0:5,0:5:3.01:0,3,88	0/0:13,0:13:36.12:0,36,1031
chr10	108462301	.	GGT	G	505.86	PASS	AB=0.920;AC=17;AF=0.315;AN=54;BaseQRankSum=6.289;DP=973;FS=6.021;HRun=0;HaplotypeScore=148.9263;InbreedingCoeff=0.1797;MQ=47.33;MQ0=125;MQRankSum=-3.256;QD=1.12;ReadPosRankSum=-2.422;VQSLOD=1.9492;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,5:19:11.69:107,12,0	1/1:10,1:10:8.63:69,9,0	0/0:64,0:14:8.67:0,9,83	0/0:77,0:10:3.74:0,4,84	0/0:21,0:20:32.70:0,33,486	0/0:26,1:23:2.59:0,3,474	0/0:55,0:53:33.40:0,33,1410	0/1:47,0:21:6.27:32,0,6	0/0:21,0:17:27.96:0,28,404	0/0:47,0:40:63:0,63,913	0/0:11,0:9:23.26:0,23,350	0/1:41,1:35:21.58:22,0,598	0/0:31,1:24:11.20:0,11,547	0/1:28,2:26:28.25:28,0,542	0/0:29,1:24:9.82:0,10,567	0/1:27,1:27:11.51:12,0,556	0/1:16,8:21:0.50:224,0,1	0/1:15,5:13:7.77:102,0,8	0/1:49,0:10:2.85:3,0,8	./.	1/1:99,0:87:2.06:7,2,0	0/0:28,0:28:57.17:0,57,861	0/0:21,1:20:24.08:0,24,371	0/0:56,0:50:50.32:0,50,1160	0/1:16,1:14:18.35:18,0,209	0/1:38,1:32:33.24:33,0,676	1/1:3,0:1:1.25:3,1,0	0/0:11,0:11:15.05:0,15,228
chr10	108462409	.	GGTGT	G	2265.97	PASS	AB=0.941;AC=13;AF=0.250;AN=52;BaseQRankSum=1.415;DP=1113;FS=26.410;HRun=0;HaplotypeScore=174.9946;InbreedingCoeff=0.1083;MQ=34.31;MQ0=238;MQRankSum=-2.020;QD=3.85;ReadPosRankSum=1.357;VQSLOD=0.7568;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:46,8:40:12.37:226,0,12	0/1:14,0:11:58.93:59,0,91	./.	./.	0/0:15,0:9:12.04:0,12,219	0/0:26,0:20:21.47:0,21,655	0/0:69,0:50:44.15:0,44,1140	0/1:49,2:20:38.31:139,0,38	0/0:42,0:29:48.19:0,48,922	0/1:75,0:42:20.94:21,0,1050	0/0:15,0:8:5.75:0,6,50	0/0:44,0:33:36.53:0,37,713	0/0:25,0:20:26.57:0,27,496	0/0:30,0:22:26.77:0,27,645	0/0:34,0:14:10.83:0,11,241	0/0:32,0:23:44.68:0,45,843	0/1:36,1:29:61.57:134,0,62	1/1:17,7:17:15.62:310,16,0	0/1:48,2:20:1.38:211,0,1	0/1:21,3:16:28.81:55,0,29	1/1:148,24:129:72.64:1141,73,0	0/0:26,0:19:17.80:0,18,291	0/0:20,0:14:5.94:0,6,149	0/0:51,0:42:53.24:0,53,1060	0/0:22,0:17:11.97:0,12,289	0/1:48,1:22:10.31:10,0,602	0/1:24,3:15:37.38:118,0,37	0/0:13,0:8:12.93:0,13,237
chr10	108462482	.	G	GGA	1301.25	PASS	AB=0.879;AC=10;AF=0.179;AN=56;BaseQRankSum=2.641;DP=917;FS=1.324;HRun=0;HaplotypeScore=134.4384;InbreedingCoeff=0.1141;MQ=39.34;MQ0=79;MQRankSum=-4.642;QD=5.47;ReadPosRankSum=-1.768;VQSLOD=3.1331;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,1:11:2.62:40,0,3	0/1:6,0:3:0.52:55,0,1	0/0:102,0:10:27.34:0,27,351	0/0:108,0:13:32.88:0,33,417	0/0:22,0:22:45.04:0,45,650	0/0:19,0:18:46.71:0,47,735	0/0:47,0:41:98.91:0,99,1490	0/1:25,11:24:99:487,0,151	0/0:28,0:25:32.77:0,33,713	0/0:48,0:38:81:0,81,1238	0/0:15,0:13:26.98:0,27,440	0/0:41,0:36:86.88:0,87,1288	0/0:14,0:12:33.09:0,33,494	0/0:27,0:25:66.20:0,66,1045	0/0:29,0:23:52.32:0,52,768	0/0:32,0:30:86.89:0,87,1282	0/1:12,1:10:19.75:90,0,20	0/1:11,2:11:49.94:159,0,50	0/1:30,5:20:73.62:265,0,74	1/1:10,3:9:2.78:61,3,0	0/1:70,22:74:21.57:142,0,22	0/0:22,0:20:51.10:0,51,761	0/0:22,0:21:35.96:0,36,561	0/0:49,0:45:99:0,104,1628	0/0:10,0:7:9.03:0,9,147	0/0:27,0:21:48.08:0,48,732	0/1:8,2:9:46.36:144,0,46	0/0:16,0:16:45.11:0,45,657
chr10	108462487	.	TGTG	T	212.60	PASS	AB=0.962;AC=6;AF=0.107;AN=56;BaseQRankSum=8.130;DP=919;FS=9.368;HRun=0;HaplotypeScore=144.6273;InbreedingCoeff=0.2614;MQ=39.93;MQ0=70;MQRankSum=-6.624;QD=1.26;ReadPosRankSum=-3.125;VQSLOD=1.3400;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:14:7.35:7,0,28	0/0:6,0:3:2.82:0,3,33	0/0:98,0:11:23.96:0,24,393	0/0:105,0:15:33.10:0,33,533	0/0:22,0:21:47.15:0,47,973	0/0:21,0:20:54.05:0,54,1084	0/0:49,0:42:90.61:0,91,1943	0/1:31,2:23:99:114,0,366	0/0:29,0:26:66.01:0,66,1297	0/0:48,0:40:69.86:0,70,1815	0/0:16,0:14:30.03:0,30,609	0/0:42,0:37:95.54:0,96,1964	0/0:14,0:13:33:0,33,775	0/0:29,0:26:69.24:0,69,1500	0/0:26,0:22:51.17:0,51,978	0/0:31,0:29:54.62:0,55,1715	1/1:15,0:12:9.09:75,9,0	0/1:10,1:10:1.85:106,0,2	0/0:34,0:20:4.23:0,4,171	0/0:13,0:9:3.89:0,4,33	0/1:85,1:70:30.46:30,0,33	0/0:24,0:22:59.75:0,60,1150	0/0:23,0:21:36.12:0,36,757	0/0:51,0:47:96.38:0,96,2468	0/0:10,0:8:12:0,12,224	0/0:31,0:25:57.15:0,57,1079	0/0:10,0:9:8.81:0,9,160	0/0:17,0:17:48.16:0,48,1026
chr10	108462506	.	GTGCATGT	G	903.45	PASS	AB=0.985;AC=12;AF=0.214;AN=56;BaseQRankSum=9.191;DP=813;FS=0.000;HRun=0;HaplotypeScore=175.2381;InbreedingCoeff=0.4810;MQ=47.32;MQ0=39;MQRankSum=-7.664;QD=6.69;ReadPosRankSum=-1.910;VQSLOD=2.3749;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,1:12:29.56:308,0,30	0/0:3,0:1:0:0,0,0	0/0:74,0:17:41.49:0,41,1473	0/0:80,0:16:8.71:0,9,654	0/0:22,0:21:54.19:0,54,2071	0/0:23,0:22:60.21:0,60,2374	0/0:50,0:45:99:0,113,4373	1/1:15,0:8:9.07:62,9,0	0/0:33,0:29:80.95:0,81,3030	0/0:46,0:41:99:0,108,4112	0/0:16,0:15:35.99:0,36,1319	0/0:46,0:43:99:0,114,4178	0/0:20,0:19:54.66:0,55,2181	0/0:34,0:32:87.30:0,87,3463	0/0:18,0:17:45.63:0,46,1802	0/0:38,0:38:97.86:0,98,3943	1/1:5,3:8:13.09:325,13,0	1/1:6,0:5:9:117,9,0	0/1:14,0:10:59.05:69,0,59	0/1:6,0:5:17.15:53,0,17	1/1:59,0:46:2.87:69,3,0	0/0:27,0:27:78.27:0,78,3093	0/0:20,0:19:39.60:0,40,1413	0/0:54,0:54:99:0,138,5264	0/0:19,0:18:39.13:0,39,1567	0/0:27,0:25:63.17:0,63,2369	0/1:7,0:6:56.41:59,0,56	0/0:20,0:20:52.68:0,53,2205
chr10	108462508	.	GCA	G	383.23	PASS	AB=0.655;AC=16;AF=0.286;AN=56;BaseQRankSum=9.908;DP=756;FS=7.888;HRun=0;HaplotypeScore=120.3890;InbreedingCoeff=0.7570;MQ=48.69;MQ0=30;MQRankSum=-9.079;QD=3.39;ReadPosRankSum=-0.969;VQSLOD=1.5562;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,4:11:6.99:38,7,0	0/1:1,0:1:0:0,0,0	0/0:67,4:17:45.13:0,45,818	0/0:66,7:15:22.77:0,23,329	0/0:22,0:21:54.18:0,54,1009	0/0:21,2:23:31.73:0,32,1164	0/0:39,8:44:75.31:0,75,2131	1/1:4,2:3:5.69:79,6,0	0/0:29,4:30:2.86:0,3,1409	0/0:39,0:38:99:0,102,2048	0/0:13,0:13:32.89:0,33,636	0/0:44,0:42:84.16:0,84,2093	0/0:18,1:19:16.56:0,17,1029	0/0:32,0:32:87.17:0,87,1703	0/0:16,1:17:45.15:0,45,892	0/0:37,1:37:99:0,103,2007	1/1:5,2:7:11.58:63,12,0	1/1:0,1:5:8.34:62,8,0	0/1:4,2:7:18.53:74,0,19	1/1:3,3:5:11.91:107,12,0	1/1:17,15:37:3.21:26,3,0	0/0:27,0:27:78.26:0,78,1539	0/0:19,0:19:36.12:0,36,682	0/0:49,2:50:99:0,106,2564	0/0:18,0:18:42.14:0,42,819	0/0:23,1:23:60.16:0,60,1155	1/1:0,5:5:11.85:108,12,0	0/0:19,1:20:49.04:0,49,1053
chr10	108462514	.	GTGTATT	G	444.36	PASS	AB=0.799;AC=13;AF=0.232;AN=56;BaseQRankSum=9.403;DP=771;FS=1.618;HRun=0;HaplotypeScore=166.3881;InbreedingCoeff=0.5569;MQ=49.90;MQ0=28;MQRankSum=-8.779;QD=3.53;ReadPosRankSum=-0.985;VQSLOD=2.7341;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:11:8.59:9,0,27	0/0:2,0:1:0:0,0,0	0/0:66,0:17:34.57:0,35,1304	0/0:71,0:16:29.89:0,30,633	0/0:22,0:21:54.14:0,54,1682	0/0:24,0:23:62.54:0,63,2145	0/0:50,0:45:99:0,113,3418	1/1:13,0:6:0.47:2,0,0	0/0:34,0:32:44.84:0,45,2550	0/0:40,0:39:99:0,105,3590	0/0:18,0:18:49.37:0,49,1393	0/0:46,0:45:99:0,120,3734	0/0:19,0:19:46.42:0,46,1852	0/0:34,0:33:90.18:0,90,3015	0/0:17,0:16:42.14:0,42,1409	0/0:38,0:37:99:0,104,3450	1/1:8,0:7:12.42:64,12,0	1/1:5,0:5:5.64:60,6,0	0/1:11,2:11:57.15:116,0,57	1/1:4,3:5:11.90:150,12,0	1/1:52,4:40:2.27:57,2,0	0/0:29,0:29:84.29:0,84,2878	0/0:16,0:15:36.55:0,37,1080	0/0:52,0:52:99:0,137,4596	0/0:20,0:20:50.34:0,50,1541	0/0:24,0:22:57.17:0,57,1825	0/1:3,3:6:19.29:139,0,19	0/0:19,0:20:49.79:0,50,1866
chr10	108462516	.	GTATTT	G	233.95	PASS	AB=0.916;AC=10;AF=0.185;AN=54;BaseQRankSum=8.753;DP=769;FS=11.953;HRun=0;HaplotypeScore=155.0799;InbreedingCoeff=0.4020;MQ=50.05;MQ0=30;MQRankSum=-7.847;QD=2.05;ReadPosRankSum=0.334;VQSLOD=2.0428;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,1:11:7.52:92,0,8	./.	0/0:66,0:17:44.65:0,45,1303	0/0:65,0:16:30.51:0,31,638	0/0:21,0:20:57.18:0,57,1657	0/0:25,0:25:68.17:0,68,2228	0/0:48,0:45:99:0,112,3529	0/0:11,0:4:4.83:0,5,43	0/0:31,2:30:26.87:0,27,2534	0/0:39,0:38:99:0,105,3452	0/0:18,0:18:49.05:0,49,1426	0/0:47,0:47:99:0,132,3896	0/0:18,1:19:15.65:0,16,1729	0/0:34,0:33:90.06:0,90,2906	0/0:15,0:16:42.14:0,42,1346	0/0:36,1:37:99:0,105,3326	1/1:7,0:7:12.28:114,12,0	1/1:4,1:5:3.70:39,4,0	0/1:15,0:11:30.18:30,0,74	0/1:7,0:5:27.98:34,0,28	1/1:49,1:40:3.52:22,4,0	0/0:30,0:30:87.30:0,87,2823	0/0:17,0:16:39.56:0,40,1114	0/0:51,0:51:99:0,132,4414	0/0:22,0:22:57.15:0,57,1648	0/0:22,0:22:57.20:0,57,1814	0/1:6,0:6:25.57:46,0,26	0/0:21,0:20:53.41:0,53,1768
chr10	108462519	.	T	TG	66.34	PASS	AB=0.938;AC=8;AF=0.143;AN=56;BaseQRankSum=7.128;DP=772;FS=11.812;HRun=0;HaplotypeScore=119.1682;InbreedingCoeff=0.6096;MQ=52.90;MQ0=29;MQRankSum=-4.998;QD=1.95;ReadPosRankSum=0.181;VQSLOD=2.1788;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:10:2.38:34,2,0	0/1:1,0:1:0:0,0,0	0/0:70,0:21:41.09:0,41,565	0/0:67,0:17:26.20:0,26,315	0/0:20,0:19:54.14:0,54,733	0/0:27,0:26:48.23:0,48,938	0/0:47,0:44:99:0,107,1470	0/0:7,0:4:0.05:0,0,16	0/0:31,2:30:68.96:0,69,1092	0/0:40,1:40:99:0,105,1468	0/0:21,0:21:45.59:0,46,608	0/0:47,0:46:99:0,126,1660	0/0:20,0:20:30.46:0,30,766	0/0:34,0:33:90.29:0,90,1241	0/0:19,0:17:42.05:0,42,565	0/0:38,0:38:99:0,105,1421	1/1:7,1:7:16.59:113,17,0	1/1:4,0:4:5.57:34,6,0	0/0:13,0:10:9.23:0,9,71	0/0:7,0:6:10.82:0,11,47	0/0:44,4:34:2.17:0,2,9	0/0:30,0:30:87.28:0,87,1199	0/0:21,0:19:42.07:0,42,530	0/0:53,0:52:99:0,139,1914	0/0:23,0:22:54.09:0,54,710	0/0:27,1:26:60.18:0,60,807	0/1:6,1:6:8.22:8,0,14	0/0:21,0:20:54.65:0,55,755
chr10	108462528	.	TGTG	T	1370.02	PASS	AB=0.807;AC=16;AF=0.286;AN=56;BaseQRankSum=9.100;DP=843;FS=0.545;HRun=0;HaplotypeScore=148.1387;InbreedingCoeff=0.7084;MQ=53.40;MQ0=29;MQRankSum=-5.592;QD=8.15;ReadPosRankSum=-4.282;VQSLOD=2.1454;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:14:2.88:80,3,0	1/1:3,0:3:2.73:11,3,0	0/0:69,0:22:46.89:0,47,858	0/0:65,0:20:36.12:0,36,535	0/0:21,0:20:44.18:0,44,923	0/0:28,0:27:71.06:0,71,1529	0/0:48,0:44:52.89:0,53,2035	1/1:12,11:18:39.12:587,39,0	0/0:30,0:27:56.57:0,57,1579	0/0:41,0:40:99:0,105,2206	0/0:22,0:22:51:0,51,1083	0/0:50,0:49:99:0,125,2812	0/0:22,0:22:63.15:0,63,1270	0/0:37,0:36:96.31:0,96,2025	0/0:23,1:22:50.65:0,51,1041	0/0:36,0:36:99:0,99,2156	1/1:9,0:8:10.22:69,10,0	1/1:8,0:7:4.88:26,5,0	1/1:14,3:12:7.22:142,7,0	1/1:0,11:10:12.04:196,12,0	0/1:51,15:49:12.30:266,0,12	0/0:34,0:34:93.31:0,93,2063	0/0:22,0:20:51.16:0,51,1106	0/0:54,0:53:99:0,124,3042	0/0:22,0:21:54.18:0,54,1159	0/0:29,0:27:63.21:0,63,1299	0/1:9,3:11:48.28:168,0,48	0/0:20,0:19:56.40:0,56,1156
chr10	108462529	.	G	GTA	216.35	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.912;DP=845;FS=2.759;HRun=0;HaplotypeScore=144.4716;InbreedingCoeff=0.8439;MQ=53.52;MQ0=29;MQRankSum=-6.634;QD=5.28;ReadPosRankSum=0.323;VQSLOD=3.3794;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,2:16:16.04:96,16,0	1/1:2,1:3:6.02:70,6,0	0/0:72,0:24:47.71:0,48,668	0/0:67,0:22:29.93:0,30,384	0/0:19,0:18:51.11:0,51,729	0/0:29,0:28:72.24:0,72,1097	0/0:46,0:42:99:0,105,1524	0/0:23,0:18:31.03:0,31,139	0/0:30,0:27:75.12:0,75,1092	0/0:40,0:39:99:0,105,1575	0/0:22,0:22:51.14:0,51,776	0/0:50,0:49:99:0,136,1982	0/0:22,0:22:24.99:0,25,830	0/0:37,0:36:96.27:0,96,1419	0/0:23,0:22:50.68:0,51,754	0/0:36,0:36:99:0,99,1512	1/1:8,1:8:7.16:83,7,0	1/1:5,3:7:11.86:109,12,0	0/0:17,0:12:0.61:0,1,17	0/0:11,0:10:11.49:0,11,60	0/0:65,1:49:16.65:0,17,112	0/0:34,0:34:93.32:0,93,1422	0/0:22,0:20:51.17:0,51,777	0/0:55,0:54:99:0,147,2117	0/0:22,0:21:54.17:0,54,802	0/0:29,0:27:66.20:0,66,968	0/0:12,0:11:9.80:0,10,76	0/0:20,0:19:56.93:0,57,838
chr10	108462535	.	T	TG	429.57	PASS	AB=0.789;AC=7;AF=0.125;AN=56;BaseQRankSum=5.741;DP=892;FS=4.951;HRun=1;HaplotypeScore=140.5095;InbreedingCoeff=0.4756;MQ=54.41;MQ0=27;MQRankSum=-7.404;QD=6.05;ReadPosRankSum=0.435;VQSLOD=0.5126;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,13:23:3.98:101,0,4	1/1:2,3:5:9.03:125,9,0	0/0:70,0:24:62.89:0,63,722	0/0:65,0:26:46.73:0,47,517	0/0:22,0:22:53.65:0,54,655	0/0:28,0:27:46.52:0,47,913	0/0:50,0:46:90.72:0,91,1386	0/0:22,0:18:25.89:0,26,161	0/0:32,0:29:77.04:0,77,959	0/0:42,0:41:99:0,111,1420	0/0:23,0:23:54.17:0,54,695	0/0:48,0:47:99:0,135,1731	0/0:25,0:25:66.21:0,66,846	0/0:40,0:39:99:0,102,1321	0/0:23,0:22:50.77:0,51,659	0/0:40,0:40:99:0,111,1422	0/1:7,5:13:9.34:144,0,9	1/1:5,8:12:1.51:166,2,0	0/0:18,0:13:18.93:0,19,205	0/0:14,0:13:17.81:0,18,138	0/0:74,0:58:16.97:0,17,111	0/0:36,0:36:96.20:0,96,1232	0/0:21,0:19:51.17:0,51,661	0/0:56,1:56:99:0,157,1996	0/0:24,0:23:54.18:0,54,700	0/0:28,0:27:63.20:0,63,816	0/1:12,0:11:19.38:19,0,124	0/0:19,0:18:54.17:0,54,696
chr10	108463379	.	C	CTG	13417.21	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-19.135;DP=733;FS=11.583;HRun=0;HaplotypeScore=77.7825;InbreedingCoeff=0.9999;MQ=74.99;MQ0=0;MQRankSum=0.275;QD=49.69;ReadPosRankSum=-0.600;VQSLOD=4.9196;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:42:99:2248,120,0	1/1:1,11:12:33.11:618,33,0	0/0:23,0:23:60.11:0,60,820	0/0:20,0:18:40.25:0,40,523	0/0:17,0:17:51.17:0,51,751	0/0:15,0:15:45.14:0,45,644	0/0:39,0:39:99:0,117,1704	1/1:4,38:43:99:2073,114,0	0/0:25,0:25:75.24:0,75,1083	0/0:32,0:32:84.28:0,84,1237	0/0:20,0:20:60.20:0,60,884	0/0:26,0:26:78.26:0,78,1149	0/0:22,0:22:60.20:0,60,883	0/0:24,0:24:72.24:0,72,1060	0/0:26,0:26:75.25:0,75,1103	0/0:25,0:25:75.24:0,75,1086	1/1:3,34:37:90.31:1673,90,0	1/1:1,15:16:39.13:730,39,0	1/1:5,16:21:51.17:932,51,0	1/1:0,30:30:84.29:1553,84,0	1/1:0,39:39:99:1967,105,0	0/0:22,0:22:63.20:0,63,908	0/0:27,0:27:75.25:0,75,1104	0/0:24,0:24:72.17:0,72,994	0/0:35,0:35:96.32:0,96,1412	0/0:25,0:25:66.21:0,66,955	1/1:0,28:30:87.30:1623,87,0	0/0:16,0:16:48.16:0,48,707
chr10	108464045	.	TTCTC	T	1701.04	PASS	AB=0.763;AC=17;AF=0.304;AN=56;BaseQRankSum=3.892;DP=351;FS=3.768;HRun=0;HaplotypeScore=63.2625;InbreedingCoeff=0.6145;MQ=50.69;MQ0=10;MQRankSum=-4.645;QD=17.54;ReadPosRankSum=0.991;VQSLOD=2.9909;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,5:14:2.74:272,3,0	1/1:1,0:1:3.01:50,3,0	0/0:64,0:18:42.61:0,43,893	0/0:51,0:18:31.15:0,31,527	0/0:8,0:9:12.64:0,13,211	0/0:11,0:11:27.09:0,27,602	0/0:15,0:16:23.21:0,23,486	1/1:6,2:8:12.04:204,12,0	0/0:10,0:10:30.10:0,30,692	0/0:7,0:8:10.89:0,11,254	0/0:7,0:7:9.03:0,9,195	0/0:7,0:7:18.06:0,18,390	0/0:7,0:7:12.04:0,12,260	0/0:7,0:7:12.04:0,12,261	0/0:9,0:9:21.07:0,21,467	0/1:5,0:6:2.19:2,0,79	1/1:3,5:8:8.47:152,8,0	0/1:5,7:12:19.72:188,0,20	1/1:4,3:7:12.04:201,12,0	1/1:12,1:13:2.41:96,2,0	0/1:9,3:12:4.56:149,0,5	0/0:9,0:10:20.86:0,21,399	0/0:17,0:17:30.10:0,30,631	0/0:6,0:7:11.83:0,12,237	0/0:6,0:6:15.05:0,15,355	0/0:5,0:6:17.85:0,18,374	1/1:6,10:16:33.11:561,33,0	0/0:1,0:1:2.99:0,3,23
chr10	108464693	.	A	AAAG	7309.01	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-3.004;DP=455;FS=2.500;HRun=0;HaplotypeScore=65.9542;InbreedingCoeff=0.9664;MQ=66.88;MQ0=0;MQRankSum=-1.418;QD=35.31;ReadPosRankSum=1.492;VQSLOD=5.2791;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:27:57.20:1150,57,0	1/1:2,7:10:18.06:351,18,0	0/0:10,0:7:11.75:0,12,118	0/0:6,0:5:5.15:0,5,63	0/0:24,0:24:60.17:0,60,847	0/0:22,0:22:60.19:0,60,852	0/0:9,0:9:27.05:0,27,326	1/1:10,20:33:67.33:1092,67,0	0/0:6,0:6:14.98:0,15,143	0/0:18,0:18:48.11:0,48,595	0/0:11,0:11:30.09:0,30,424	0/0:13,0:13:30.10:0,30,444	0/0:15,0:15:39.12:0,39,557	0/0:15,0:15:39.03:0,39,577	0/0:16,0:16:42.11:0,42,568	0/0:12,0:12:33.09:0,33,435	1/1:10,23:32:57.20:1170,57,0	1/1:1,16:18:33.11:677,33,0	1/1:2,18:21:54.13:1009,54,0	1/1:1,15:20:35.92:570,36,0	1/1:3,14:19:27.09:553,27,0	0/0:5,0:5:15.03:0,15,170	0/0:6,0:6:15.04:0,15,204	0/0:10,0:10:30.05:0,30,400	0/0:17,0:17:45.15:0,45,649	0/0:23,0:23:60.17:0,60,834	1/1:4,22:23:36.12:738,36,0	0/0:10,0:10:27.07:0,27,379
chr10	108466799	.	T	TATC	1132.07	PASS	AB=0.938;AC=8;AF=0.154;AN=52;BaseQRankSum=5.475;DP=613;FS=14.175;HRun=0;HaplotypeScore=145.4750;InbreedingCoeff=-0.1808;MQ=51.58;MQ0=15;MQRankSum=-3.962;QD=5.60;ReadPosRankSum=-4.252;VQSLOD=0.2210;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:22:29.85:48,0,30	0/0:7,0:7:4.07:0,4,12	./.	./.	0/0:25,0:24:26.80:0,27,342	0/0:24,0:23:36.07:0,36,423	0/0:17,0:15:24.07:0,24,349	0/1:51,0:46:99:124,0,1336	0/0:23,0:23:66.21:0,66,1044	0/0:28,0:28:81.26:0,81,1238	0/0:19,0:19:51.17:0,51,825	0/0:23,0:23:4.70:0,5,324	0/0:20,0:20:54.17:0,54,846	0/0:31,0:30:87.07:0,87,1366	0/0:38,0:38:99:0,102,1611	0/0:17,0:16:48.15:0,48,748	0/1:23,0:21:75.18:75,0,119	0/1:17,0:17:40.51:41,0,344	0/1:16,4:18:99:425,0,221	0/1:27,0:27:26.51:27,0,170	0/1:6,3:10:5.39:5,0,42	0/0:20,0:20:57.19:0,57,890	0/0:22,0:20:57.19:0,57,916	0/0:16,0:16:39.12:0,39,592	0/0:22,0:22:47.45:0,47,924	0/0:32,0:29:87.28:0,87,1354	0/1:28,0:26:99:517,0,131	0/0:25,0:23:63.21:0,63,1004
chr10	108466893	.	T	TTCTATCTA	1296.48	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-3.450;DP=586;FS=0.000;HRun=0;HaplotypeScore=148.4497;InbreedingCoeff=0.8523;MQ=58.84;MQ0=0;MQRankSum=-5.610;QD=29.47;ReadPosRankSum=0.265;VQSLOD=3.0448;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,2:12:6:251,6,0	1/1:3,10:14:21.07:880,21,0	0/0:15,0:12:13.29:0,13,235	0/0:2,0:1:3.01:0,3,62	0/0:33,0:33:84.29:0,84,2039	0/0:17,0:17:42.14:0,42,1071	0/0:17,0:17:33.11:0,33,807	0/0:35,0:35:69.19:0,69,1290	0/0:20,0:20:48.14:0,48,1108	0/0:41,0:41:93.32:0,93,2204	0/0:28,0:28:78.25:0,78,1797	0/0:24,0:24:57.19:0,57,1279	0/0:17,0:17:39.13:0,39,978	0/0:21,0:21:48.13:0,48,1119	0/0:24,0:24:63.22:0,63,1481	0/0:20,0:20:48.16:0,48,1250	1/1:11,0:13:6.02:208,6,0	1/1:4,1:5:6.02:96,6,0	0/0:23,0:23:51.17:0,51,1073	0/0:30,0:30:78.27:0,78,1862	0/0:16,0:16:42.14:0,42,1021	0/0:23,0:23:54.17:0,54,1306	0/0:29,0:28:78.27:0,78,1839	0/0:16,0:16:39.12:0,39,924	0/0:14,0:14:36.12:0,36,928	0/0:28,0:28:54.18:0,54,1286	0/0:27,0:27:57.18:0,57,1431	0/0:22,0:21:30.10:0,30,636
chr10	108467009	.	C	CATCT	3725.27	PASS	AB=0.639;AC=20;AF=0.385;AN=52;BaseQRankSum=-6.073;DP=684;FS=1.156;HRun=0;HaplotypeScore=124.6129;InbreedingCoeff=0.7681;MQ=55.56;MQ0=8;MQRankSum=0.995;QD=13.95;ReadPosRankSum=2.535;VQSLOD=3.5570;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,3:33:12.04:233,12,0	1/1:7,0:13:6.02:91,6,0	./.	./.	0/0:27,0:27:51.16:0,51,774	0/0:24,0:23:30.06:0,30,468	0/0:21,0:22:33.05:0,33,485	1/1:39,0:37:5.98:60,6,0	0/0:21,0:21:27.09:0,27,419	0/0:33,0:33:54.18:0,54,823	0/0:25,0:25:32.82:0,33,494	1/1:11,13:26:30.10:708,30,0	0/1:13,10:24:25.75:389,0,26	0/0:28,0:28:36.11:0,36,535	0/0:34,0:34:57.15:0,57,883	0/0:14,0:14:24.07:0,24,353	1/1:17,2:21:8.92:193,9,0	1/1:22,0:24:17.09:241,17,0	1/1:14,2:16:6.02:142,6,0	1/1:6,13:20:30.10:708,30,0	0/1:5,11:16:25.75:404,0,26	0/0:21,0:21:24.06:0,24,352	0/0:27,0:26:36.12:0,36,556	0/0:20,0:21:44.93:0,45,637	0/0:28,0:28:57.15:0,57,842	0/0:34,0:34:54.17:0,54,822	1/1:19,14:33:24.08:557,24,0	0/0:21,0:20:24.08:0,24,368
chr10	108467387	.	A	AGT	239.40	PASS	AB=1.000;AC=13;AF=0.271;AN=48;BaseQRankSum=-0.651;DP=483;FS=1.240;HRun=0;HaplotypeScore=81.3131;InbreedingCoeff=-0.0124;MQ=58.50;MQ0=12;MQRankSum=-0.221;QD=1.09;ReadPosRankSum=-2.813;VQSLOD=1.1663;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:14.24:0,14,106	./.	./.	./.	0/0:13,0:13:6.01:0,6,60	0/1:15,0:15:2.15:2,0,37	0/0:25,0:24:11.58:0,12,102	./.	0/0:13,0:12:15.03:0,15,156	0/1:23,0:23:12.60:13,0,33	0/0:10,0:10:2.84:0,3,14	0/1:14,0:16:5.66:6,0,30	0/0:12,0:12:6:0,6,56	0/0:10,0:10:5.97:0,6,64	0/0:14,0:17:14.64:0,15,98	0/0:8,0:8:6:0,6,55	0/1:18,0:20:0.73:1,0,103	0/1:18,0:16:9.78:14,0,10	0/1:18,0:18:6.25:11,0,6	0/0:11,0:11:6.11:0,6,28	0/1:38,0:36:7.81:8,0,31	0/1:12,0:13:8.58:9,0,67	0/1:11,0:11:24.57:25,0,78	1/1:13,17:31:2.57:245,3,0	0/0:9,0:11:11.86:0,12,110	0/0:14,0:15:5.28:0,5,23	1/1:11,0:9:5.86:34,6,0	0/0:11,0:11:12.39:0,12,103
chr10	108468136	.	CATG	C	11656.68	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.811;DP=692;FS=11.609;HRun=0;HaplotypeScore=104.0654;InbreedingCoeff=0.9985;MQ=80.19;MQ0=0;MQRankSum=-7.520;QD=39.12;ReadPosRankSum=0.596;VQSLOD=5.6150;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,45:52:99:1905,117,0	1/1:0,7:7:18.06:294,18,0	0/0:32,0:32:96.33:0,96,2114	0/0:21,0:21:57.16:0,57,1151	0/0:19,0:19:54.19:0,54,1181	0/0:25,0:25:75.26:0,75,1675	0/0:27,0:27:78.27:0,78,1743	1/1:1,29:30:84.29:1365,84,0	0/0:35,0:35:99:0,99,2168	0/0:20,0:20:57.20:0,57,1273	0/0:12,0:12:36.12:0,36,804	0/0:29,0:29:87.30:0,87,1919	0/0:23,0:23:60.21:0,60,1321	0/0:28,0:28:84.29:0,84,1857	0/0:30,0:30:90.31:0,90,1992	0/0:29,0:29:81.28:0,81,1803	1/1:0,30:30:72.25:1176,72,0	1/1:1,22:23:60.16:951,60,0	1/1:4,22:26:66.19:1021,66,0	1/1:0,19:19:45.15:735,45,0	1/1:2,34:36:75.26:1224,75,0	0/0:15,0:15:45.15:0,45,1005	0/0:11,0:11:33.11:0,33,737	0/0:21,0:21:57.20:0,57,1253	0/0:17,0:17:48.16:0,48,1072	1/1:2,23:25:66.19:1026,66,0	1/1:4,33:37:96.33:1568,96,0	1/1:2,11:13:24.08:392,24,0
chr10	108468878	.	CCCTGGGATAG	C	1236.97	PASS	AB=0.742;AC=9;AF=0.188;AN=48;BaseQRankSum=6.711;DP=638;FS=0.957;HRun=0;HaplotypeScore=185.1591;InbreedingCoeff=0.7112;MQ=74.58;MQ0=2;MQRankSum=-5.209;QD=13.16;ReadPosRankSum=-1.780;VQSLOD=2.4632;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:63.19:0,63,2886	0/0:11,0:11:24.08:0,24,1182	./.	./.	0/0:24,0:24:42.13:0,42,1498	0/0:21,0:21:36.11:0,36,1509	0/0:30,0:30:30.10:0,30,1469	./.	0/0:23,0:23:24.08:0,24,1081	0/0:21,0:21:12.04:0,12,527	0/0:17,0:17:24.08:0,24,1034	0/0:40,0:40:60.21:0,60,2536	0/0:19,0:19:30.10:0,30,1350	0/0:24,0:24:30.10:0,30,1425	0/0:26,0:26:18.06:0,18,791	0/0:22,0:22:30.10:0,30,1284	0/0:20,0:20:33.11:0,33,1558	0/0:16,0:16:15.05:0,15,674	1/1:22,1:23:3.01:88,3,0	./.	1/1:21,3:24:3.01:55,3,0	0/0:15,0:15:24.08:0,24,995	0/0:16,0:16:21.07:0,21,968	0/0:37,0:37:54.19:0,54,2652	0/0:10,0:10:18.06:0,18,887	0/1:15,8:23:99:615,0,118	1/1:10,6:16:12.04:351,12,0	1/1:5,3:8:9.03:263,9,0
chr10	108470078	.	A	AG	7324.99	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-11.381;DP=503;FS=5.563;HRun=1;HaplotypeScore=51.5334;InbreedingCoeff=0.9935;MQ=68.09;MQ0=6;MQRankSum=-0.953;QD=34.39;ReadPosRankSum=0.354;VQSLOD=4.2315;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:33:78.13:1081,78,0	1/1:0,5:5:15.05:223,15,0	0/0:11,0:9:14.23:0,14,210	0/0:12,0:11:27.89:0,28,325	0/0:23,0:22:62.46:0,62,663	0/0:22,0:22:48.12:0,48,578	0/0:22,0:22:60.17:0,60,759	1/1:4,21:25:59.10:763,59,0	0/0:16,0:16:39.13:0,39,503	0/0:21,0:21:50.88:0,51,596	0/0:11,0:10:27.04:0,27,328	0/0:14,0:14:39.13:0,39,504	0/0:16,0:16:48.09:0,48,576	0/0:15,0:15:38.28:0,38,440	0/0:14,0:14:39.09:0,39,474	0/0:20,0:20:57.11:0,57,688	1/1:2,21:22:54.17:785,54,0	1/1:0,22:21:51.17:759,51,0	1/1:1,19:20:54.06:704,54,0	1/1:1,12:13:33.11:466,33,0	1/1:3,17:20:45.08:619,45,0	0/0:22,0:22:60.16:0,60,746	0/0:20,0:19:48.83:0,49,539	0/0:15,0:15:42.12:0,42,528	0/0:15,0:14:33.03:0,33,379	1/1:1,18:19:18.71:711,19,0	1/1:1,20:21:54.10:775,54,0	1/1:1,11:11:30.10:439,30,0
chr10	108471363	.	T	TCA	16236.90	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-4.996;DP=1201;FS=2.298;HRun=0;HaplotypeScore=166.2249;InbreedingCoeff=0.9661;MQ=61.43;MQ0=2;MQRankSum=-2.119;QD=39.22;ReadPosRankSum=1.585;VQSLOD=5.9488;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,54:60:99:2182,126,0	1/1:0,14:15:39.13:675,39,0	0/0:59,0:44:98.77:0,99,1291	0/0:61,0:55:99:0,108,1435	0/0:27,0:26:78.24:0,78,1024	0/0:43,0:43:99:0,114,1516	0/0:37,0:37:87.26:0,87,1126	1/1:11,27:40:84.25:1374,84,0	0/0:48,0:48:99:0,123,1591	0/0:39,0:39:99:0,99,1306	0/0:23,0:23:66.19:0,66,848	0/0:54,0:54:99:0,150,1938	0/0:56,0:56:99:0,150,1959	0/0:45,0:45:99:0,126,1622	0/0:63,0:63:99:0,163,2154	0/0:63,0:63:99:0,175,2285	1/1:6,21:27:61.45:1028,61,0	1/1:6,23:28:0.92:961,1,0	1/1:5,23:32:84.23:1315,84,0	1/1:2,20:22:42.14:728,42,0	1/1:8,100:108:99:4713,274,0	0/0:46,0:46:99:0,135,1755	0/0:30,0:30:87.26:0,87,1139	0/0:56,0:56:99:0,150,1978	0/0:37,0:37:99:0,105,1398	1/1:5,28:33:86.63:1401,87,0	1/1:2,31:34:81.28:1394,81,0	1/1:0,11:11:27.09:468,27,0
chr10	108471873	.	T	TA	8822.07	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-17.844;DP=708;FS=0.297;HRun=7;HaplotypeScore=66.8484;InbreedingCoeff=0.9979;MQ=74.90;MQ0=1;MQRankSum=-3.167;QD=29.12;ReadPosRankSum=0.166;VQSLOD=5.2910;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,29:34:87.22:1034,87,0	1/1:1,11:12:27.08:326,27,0	0/0:23,0:21:28.86:0,29,412	0/0:14,0:13:16.57:0,17,235	0/0:36,0:36:99:0,99,956	0/0:20,0:20:51.08:0,51,492	0/0:18,0:18:45.06:0,45,429	1/1:6,28:34:55.45:935,55,0	0/0:20,0:20:54.06:0,54,514	0/0:25,0:25:66.10:0,66,637	0/0:32,0:32:90.14:0,90,869	0/0:23,0:23:57.09:0,57,550	0/0:22,0:22:60.06:0,60,567	0/0:16,0:16:42.07:0,42,406	0/0:34,0:34:87.13:0,87,840	0/0:17,0:17:48.08:0,48,463	1/1:1,28:29:66.20:797,66,0	1/1:2,16:18:42.13:507,42,0	1/1:2,17:18:25.21:586,25,0	1/1:3,31:34:67.75:1062,68,0	1/1:3,23:26:53.87:652,54,0	0/0:21,0:21:54.07:0,54,517	0/0:25,0:25:57.08:0,57,550	0/0:30,0:30:81.13:0,81,782	0/0:29,0:29:81.12:0,81,782	1/1:5,31:36:90.26:1074,90,0	1/1:4,30:35:84.26:1014,84,0	1/1:2,24:26:69.21:834,69,0
chr10	108472600	.	AGT	A	192.06	PASS	AB=0.921;AC=10;AF=0.185;AN=54;BaseQRankSum=1.752;DP=655;FS=4.108;HRun=0;HaplotypeScore=88.5126;InbreedingCoeff=0.0791;MQ=69.19;MQ0=12;MQRankSum=0.629;QD=1.00;ReadPosRankSum=1.233;VQSLOD=0.9379;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:42:26.87:0,27,308	0/0:10,0:10:3.47:0,3,26	0/0:35,0:22:0.47:0,0,1	./.	0/0:11,0:11:3.01:0,3,44	0/0:16,0:16:12.03:0,12,156	0/0:29,0:29:29.97:0,30,399	0/0:24,0:23:3.01:0,3,35	0/0:22,0:22:9:0,9,109	0/0:19,0:19:5.51:0,6,54	0/1:15,2:17:14.40:14,0,183	0/0:25,0:26:18.04:0,18,229	1/1:20,2:22:3:32,3,0	1/1:17,5:22:8.95:97,9,0	0/0:18,0:18:9.03:0,9,127	0/1:19,2:21:43.77:44,0,182	0/1:37,4:39:90.54:91,0,317	0/0:15,0:15:17.97:0,18,212	0/0:29,0:28:20.95:0,21,214	0/0:11,0:10:3:0,3,26	0/0:51,0:49:48.08:0,48,549	0/1:14,1:15:17.37:17,0,143	0/1:17,3:20:23.39:23,0,60	0/1:32,0:34:8.34:8,0,248	0/0:14,0:14:9.03:0,9,132	0/0:26,0:25:32.88:0,33,283	0/0:12,0:14:4.36:0,4,29	0/0:11,0:15:9.02:0,9,110
chr10	108472616	.	T	TGTGTGC	117.04	PASS	AB=0.922;AC=5;AF=0.089;AN=56;BaseQRankSum=4.616;DP=716;FS=1.083;HRun=0;HaplotypeScore=144.8418;InbreedingCoeff=0.0745;MQ=52.34;MQ0=24;MQRankSum=0.577;QD=1.16;ReadPosRankSum=2.255;VQSLOD=2.8372;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:53:99:0,107,997	0/1:4,5:11:0.48:100,0,0	0/0:32,0:7:14.91:0,15,113	0/0:40,0:18:35.23:0,35,301	0/0:14,0:13:22.78:0,23,217	0/0:15,0:15:29.94:0,30,330	0/0:35,0:34:71.93:0,72,850	0/0:21,0:20:48.24:0,48,391	0/0:23,0:23:50.62:0,51,459	0/0:23,0:22:61.46:0,61,560	0/0:19,0:19:35.92:0,36,384	0/0:32,0:32:83.65:0,84,851	0/0:24,0:24:50.84:0,51,431	0/0:26,0:26:53.08:0,53,480	0/0:21,0:21:41.76:0,42,455	0/0:26,0:26:57.01:0,57,696	0/0:42,0:40:99:0,107,1229	0/0:17,0:17:40.65:0,41,469	0/0:25,0:21:50.39:0,50,378	0/1:11,0:9:33.28:33,0,63	0/1:57,0:54:35.61:36,0,596	0/0:19,0:19:38.97:0,39,472	0/0:18,0:18:36.43:0,36,363	0/0:36,0:36:80.69:0,81,891	0/0:22,0:22:41.98:0,42,437	0/0:31,0:29:5.72:0,6,428	0/1:10,0:10:53.47:53,0,114	0/1:12,0:11:10.24:10,0,81
chr10	108473547	.	GGTGT	G	3927.59	PASS	AB=0.795;AC=15;AF=0.268;AN=56;BaseQRankSum=8.451;DP=781;FS=1.367;HRun=0;HaplotypeScore=175.2298;InbreedingCoeff=0.5108;MQ=56.39;MQ0=4;MQRankSum=-6.609;QD=14.55;ReadPosRankSum=-2.159;VQSLOD=3.2722;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,11:34:18.35:249,18,0	1/1:8,9:17:20.96:270,21,0	0/0:33,0:12:17.87:0,18,263	0/0:33,0:12:2.84:0,3,71	0/0:22,0:23:63:0,63,1480	0/0:25,0:25:60.21:0,60,1455	0/0:28,0:33:71.19:0,71,1362	0/1:38,6:41:99:675,0,241	0/0:32,0:33:81.07:0,81,1934	0/0:37,0:40:99:0,105,2350	0/0:20,0:20:54.19:0,54,1297	0/0:27,0:27:51.18:0,51,1244	0/0:29,0:30:75.03:0,75,1685	0/0:22,0:22:51.17:0,51,1147	0/0:22,0:21:54.17:0,54,1217	0/0:27,0:29:74.99:0,75,1690	0/1:14,3:17:83.40:224,0,83	0/0:9,0:9:3.01:0,3,54	0/1:22,5:24:1.28:476,0,1	1/1:20,9:29:21.04:296,21,0	1/1:28,6:34:12.01:148,12,0	0/0:37,0:38:84.08:0,84,1963	0/0:18,0:18:48.15:0,48,1099	0/0:41,0:42:99:0,108,2349	0/0:32,0:34:77.81:0,78,1704	0/1:17,20:35:99:1065,0,193	0/1:16,8:24:73.70:451,0,74	1/1:4,3:6:6:74,6,0
chr10	108473598	.	G	GTCTC	8822.39	PASS	AB=0.694;AC=16;AF=0.286;AN=56;BaseQRankSum=-4.443;DP=899;FS=24.860;HRun=0;HaplotypeScore=197.0719;InbreedingCoeff=0.5354;MQ=51.36;MQ0=16;MQRankSum=-7.735;QD=28.46;ReadPosRankSum=-0.958;VQSLOD=3.1658;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,20:37:26.07:703,26,0	0/1:3,6:14:65.98:66,0,133	0/0:48,0:15:36.11:0,36,603	0/0:46,0:25:63.33:0,63,1033	0/0:32,0:32:93.30:0,93,1693	0/0:29,0:29:66.19:0,66,1165	0/0:34,0:34:84.24:0,84,1462	1/1:16,38:47:8.42:2313,8,0	0/0:35,0:35:96.21:0,96,1715	0/0:38,0:37:99:0,102,1885	0/0:22,0:21:50.31:0,50,823	0/0:40,0:40:99:0,111,2015	0/0:35,0:35:99:0,99,1775	0/0:23,0:23:63.20:0,63,1120	0/0:28,0:27:78.27:0,78,1454	0/0:42,0:42:99:0,117,2134	0/1:9,6:17:54.30:453,0,54	1/1:3,13:15:21.49:927,21,0	0/1:10,7:17:29.41:559,0,29	0/1:6,13:27:5.83:311,0,6	1/1:14,28:49:23.40:648,23,0	0/0:25,0:25:53.25:0,53,1248	0/0:24,0:23:66.01:0,66,1162	0/0:51,0:50:99:0,135,2463	0/0:35,0:35:77.84:0,78,1313	0/1:13,21:39:0.63:1742,0,1	0/1:6,12:23:8.42:665,0,8	1/1:2,5:9:10.63:436,11,0
chr10	108473652	.	G	GTGTC	9989.82	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-5.681;DP=977;FS=15.630;HRun=0;HaplotypeScore=196.6184;InbreedingCoeff=0.9840;MQ=53.21;MQ0=15;MQRankSum=-5.664;QD=24.55;ReadPosRankSum=-0.252;VQSLOD=3.6133;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,44:55:19.57:490,20,0	1/1:6,3:9:12.78:251,13,0	0/0:35,0:16:35.94:0,36,487	0/0:39,0:15:30.05:0,30,377	0/0:28,0:28:69.18:0,69,1131	0/0:33,0:33:81.20:0,81,1314	0/0:35,0:34:77.90:0,78,1257	1/1:37,2:31:47.87:541,48,0	0/0:26,0:26:62.98:0,63,1059	0/0:33,0:32:81.25:0,81,1373	0/0:16,0:14:36.11:0,36,612	0/0:51,0:51:99:0,129,2168	0/0:35,0:35:96.27:0,96,1573	0/0:35,0:35:90.12:0,90,1516	0/0:33,0:33:75.26:0,75,1340	0/0:39,0:39:99:0,108,1645	1/1:11,22:32:7.66:757,8,0	1/1:7,19:25:47.84:1010,48,0	1/1:12,14:30:60.02:991,60,0	1/1:5,26:32:43.14:1094,43,0	1/1:25,70:96:49.52:1204,50,0	0/0:20,0:20:48.01:0,48,854	0/0:27,0:27:60.02:0,60,989	0/0:54,0:54:99:0,138,2256	0/0:31,0:30:72.14:0,72,1083	1/1:12,35:46:99:2189,108,0	1/1:3,16:21:38.72:898,39,0	1/1:2,10:12:24.03:564,24,0
chr10	108473774	.	GTC	G	2746.05	PASS	AB=0.694;AC=19;AF=0.339;AN=56;BaseQRankSum=11.052;DP=886;FS=54.907;HRun=0;HaplotypeScore=134.6484;InbreedingCoeff=0.7284;MQ=47.45;MQ0=59;MQRankSum=-7.026;QD=8.77;ReadPosRankSum=-3.336;VQSLOD=0.5570;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:37,14:43:29.38:305,29,0	1/1:5,4:8:4.27:29,4,0	0/0:40,0:6:18.03:0,18,289	0/0:46,0:7:8.12:0,8,183	0/0:15,0:14:32.64:0,33,455	0/0:25,0:25:72.19:0,72,1239	0/0:39,0:37:90.24:0,90,1586	1/1:44,0:30:30.96:438,31,0	0/0:26,0:23:66.18:0,66,1160	0/0:46,0:37:99:0,100,1846	0/0:19,0:19:48.08:0,48,728	0/0:44,0:44:99:0,108,2018	0/0:26,0:26:77.90:0,78,1371	0/0:36,0:36:86.29:0,86,1718	0/0:38,0:38:99:0,102,1843	0/0:35,0:35:89.58:0,90,1632	0/1:18,9:27:13.21:451,0,13	1/1:12,5:17:6:348,6,0	1/1:14,4:11:21.45:224,21,0	0/1:13,14:22:48.65:62,0,49	1/1:62,11:66:9.19:243,9,0	0/0:37,0:37:99:0,99,1761	0/0:14,0:12:33.10:0,33,570	0/0:66,0:65:99:0,175,3236	0/0:21,0:20:45.61:0,46,825	0/1:15,15:24:2.04:558,0,2	1/1:3,7:10:14.86:185,15,0	1/1:2,4:6:11.95:100,12,0
chr10	108473780	.	GTGTGTA	G	3224.03	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=13.863;DP=900;FS=51.422;HRun=0;HaplotypeScore=192.7567;InbreedingCoeff=0.8276;MQ=47.17;MQ0=62;MQRankSum=-8.465;QD=10.04;ReadPosRankSum=-4.972;VQSLOD=-0.4740;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:52,0:44:11.04:256,11,0	0/0:9,0:8:1.12:0,1,3	0/0:36,0:5:12.02:0,12,223	0/0:42,0:4:9.03:0,9,227	0/0:16,0:15:35.48:0,35,807	0/0:23,0:23:63.19:0,63,1820	0/0:37,0:35:81.26:0,81,2341	1/1:24,22:30:54.49:868,54,0	0/0:25,0:22:60.21:0,60,1829	0/0:47,0:37:99:0,104,2899	0/0:18,0:18:39.13:0,39,1038	0/0:44,0:44:99:0,114,3306	0/0:28,0:28:78.27:0,78,2334	0/0:35,0:36:93.93:0,94,2915	0/0:38,0:38:99:0,105,3000	0/0:33,0:34:82.77:0,83,2546	1/1:29,0:28:15.50:360,16,0	1/1:21,0:21:11.72:344,12,0	1/1:21,0:14:16.69:309,17,0	0/1:26,0:21:50.23:50,0,58	1/1:73,0:68:19.42:222,19,0	0/0:39,0:38:99:0,99,2782	0/0:16,0:14:39.13:0,39,1025	0/0:71,0:70:99:0,192,5706	0/0:20,0:19:45.62:0,46,1310	1/1:34,0:28:2.97:744,3,0	1/1:12,0:12:14.67:179,15,0	1/1:7,0:7:8.97:95,9,0
chr10	108473784	.	GTA	G	1690.38	PASS	AB=0.994;AC=15;AF=0.268;AN=56;BaseQRankSum=14.857;DP=907;FS=16.641;HRun=0;HaplotypeScore=151.9803;InbreedingCoeff=0.4898;MQ=46.92;MQ0=66;MQRankSum=-9.550;QD=5.23;ReadPosRankSum=-6.001;VQSLOD=-0.2163;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:49,5:46:20.99:156,21,0	0/0:9,0:8:2.83:0,3,16	0/0:34,0:5:15:0,15,198	0/0:43,0:4:9.03:0,9,168	0/0:18,0:17:41.44:0,41,607	0/0:24,0:23:63.17:0,63,1101	0/0:39,0:36:84.21:0,84,1493	1/1:41,0:26:51.91:393,52,0	0/0:25,0:22:60.18:0,60,1084	0/0:49,0:39:99:0,112,1986	0/0:15,0:15:39.12:0,39,704	0/0:45,0:45:99:0,107,1904	0/0:26,0:26:78.19:0,78,1343	0/0:36,0:36:86.31:0,86,1769	0/0:38,0:38:99:0,102,1887	0/0:34,0:34:86.38:0,86,1602	0/1:32,1:32:23.19:305,0,23	0/1:21,0:20:15.94:171,0,16	1/1:25,0:15:24.44:196,24,0	0/1:28,0:23:40.36:40,0,47	0/1:69,0:64:10.82:88,0,11	0/0:39,0:38:99:0,102,1822	0/0:17,0:15:39.11:0,39,686	0/0:71,0:70:99:0,182,3333	0/0:21,0:20:48.34:0,48,844	0/1:33,0:27:11.40:382,0,11	1/1:10,0:10:16.39:122,16,0	1/1:7,0:7:2.92:18,3,0
chr10	108473788	.	GTC	G	2059.58	PASS	AB=0.845;AC=17;AF=0.304;AN=56;BaseQRankSum=14.747;DP=914;FS=10.766;HRun=0;HaplotypeScore=150.0083;InbreedingCoeff=0.2897;MQ=47.25;MQ0=66;MQRankSum=-7.908;QD=5.66;ReadPosRankSum=-6.114;VQSLOD=0.0235;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:44,9:47:3.02:210,3,0	1/1:2,7:8:5.18:24,5,0	0/1:32,0:5:0.83:1,0,23	0/0:40,0:2:6.02:0,6,96	0/0:18,0:17:39.12:0,39,717	0/0:22,0:21:63.19:0,63,1130	0/0:38,0:35:72.02:0,72,1402	0/1:39,2:26:99:165,0,195	0/0:28,0:25:56.14:0,56,1129	0/0:51,0:40:99:0,101,1954	0/0:16,0:16:28.99:0,29,591	0/0:47,0:47:99:0,126,2189	0/0:27,0:27:63.56:0,64,1329	0/0:36,0:36:86.30:0,86,1714	0/0:35,0:35:93.19:0,93,1583	0/0:36,0:35:89.47:0,89,1428	0/1:27,5:32:88.22:294,0,88	0/1:18,3:20:36.94:238,0,37	1/1:23,2:15:0.63:206,1,0	0/1:12,17:24:39.80:106,0,40	0/1:59,11:64:65.10:168,0,65	0/0:39,0:38:99:0,102,1582	0/0:19,0:17:45.10:0,45,748	0/0:76,0:75:99:0,187,3377	0/0:22,0:21:51.58:0,52,810	0/1:22,13:29:16.15:565,0,16	1/1:3,7:10:19.48:214,19,0	1/1:6,0:6:5.86:35,6,0
chr10	108473790	.	C	CTG	2056.80	PASS	AB=0.945;AC=15;AF=0.278;AN=54;BaseQRankSum=12.843;DP=929;FS=0.905;HRun=0;HaplotypeScore=158.1862;InbreedingCoeff=0.2439;MQ=47.39;MQ0=65;MQRankSum=-6.949;QD=6.03;ReadPosRankSum=-6.026;VQSLOD=1.6184;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:50,4:50:14.06:175,0,14	1/1:10,0:9:9.33:97,9,0	./.	0/0:38,0:1:2.98:0,3,21	0/0:19,0:18:36.11:0,36,450	0/0:24,0:23:57.15:0,57,684	0/0:39,0:36:74.67:0,75,868	0/1:44,0:31:99:224,0,205	0/0:30,0:27:59.66:0,60,707	0/0:49,0:39:99:0,103,1225	0/0:17,0:17:17.01:0,17,321	0/0:48,0:48:99:0,114,1375	0/0:27,0:27:57.56:0,58,842	0/0:36,0:36:85.96:0,86,1081	0/0:35,0:35:75.24:0,75,937	0/0:37,0:36:60.39:0,60,810	0/1:26,4:31:26.49:213,0,26	0/1:19,2:20:26.17:204,0,26	0/1:25,1:15:12.97:184,0,13	0/1:29,0:24:22.51:120,0,23	0/1:61,6:64:50.77:258,0,51	0/0:40,0:40:78.03:0,78,910	0/0:19,0:17:39.11:0,39,472	0/0:75,0:75:99:0,161,2099	0/0:22,0:21:33.10:0,33,411	1/1:34,2:30:2.60:548,3,0	1/1:10,0:10:17.82:177,18,0	1/1:6,0:6:2.96:19,3,0
chr10	108474504	.	AT	A	9299.18	PASS	AB=0.833;AC=23;AF=0.411;AN=56;BaseQRankSum=18.783;DP=682;FS=7.711;HRun=5;HaplotypeScore=95.2153;InbreedingCoeff=0.9115;MQ=74.14;MQ0=0;MQRankSum=-1.241;QD=29.43;ReadPosRankSum=1.674;VQSLOD=4.9727;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,43:43:99:1381,123,0	1/1:0,14:14:38.98:442,39,0	0/1:8,1:10:23.79:24,0,167	0/0:16,0:16:46.76:0,47,551	0/0:17,0:17:45.15:0,45,615	0/0:25,0:25:69.23:0,69,942	0/0:24,0:24:69.20:0,69,899	1/1:1,25:26:72.19:806,72,0	0/0:21,0:21:54.18:0,54,739	0/0:28,0:28:75.23:0,75,986	0/0:17,0:17:39.12:0,39,518	0/0:25,0:25:69.22:0,69,929	0/0:22,0:22:60.16:0,60,787	0/0:12,0:12:33.11:0,33,450	0/0:39,0:39:99:0,108,1463	0/0:22,0:22:63.20:0,63,846	1/1:1,43:44:99:1361,120,0	1/1:1,21:22:63.18:715,63,0	1/1:4,24:28:72.19:808,72,0	1/1:0,23:23:66.15:735,66,0	1/1:5,27:32:75.21:851,75,0	0/0:25,0:25:72.23:0,72,969	0/0:24,0:24:66.21:0,66,888	0/0:26,0:26:75.20:0,75,964	0/0:23,0:23:63.18:0,63,819	1/1:1,34:35:93.26:1054,93,0	1/1:2,33:35:93.27:1055,93,0	1/1:2,2:4:6.02:68,6,0
chr10	108475250	.	CTG	C	4180.49	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.784;DP=675;FS=0.000;HRun=0;HaplotypeScore=79.6487;InbreedingCoeff=0.9991;MQ=82.85;MQ0=0;MQRankSum=-3.677;QD=34.55;ReadPosRankSum=3.646;VQSLOD=5.6150;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,45:46:99:1456,99,0	1/1:2,9:11:24.08:353,24,0	0/0:20,0:20:54.16:0,54,908	0/0:19,0:19:50.11:0,50,843	0/0:23,0:23:66.20:0,66,1202	0/0:20,0:20:57.18:0,57,1034	0/0:29,0:29:84.27:0,84,1534	0/0:27,0:27:81.26:0,81,1433	0/0:24,0:24:72.25:0,72,1330	0/0:34,0:34:99:0,102,1825	0/0:16,0:16:45.15:0,45,833	0/0:26,0:26:78.27:0,78,1459	0/0:24,0:24:69.01:0,69,1195	0/0:21,0:21:54.18:0,54,991	0/0:26,0:26:75.26:0,75,1395	0/0:22,0:22:60.19:0,60,1092	1/1:1,26:27:63.21:926,63,0	1/1:1,36:37:49.28:1445,49,0	0/0:17,0:17:45.12:0,45,738	0/0:20,0:20:57.20:0,57,1057	0/0:30,0:30:87.28:0,87,1568	0/0:29,0:29:84.27:0,84,1528	0/0:18,0:18:45.14:0,45,811	0/0:31,0:31:90.25:0,90,1567	0/0:19,0:19:48.15:0,48,858	0/0:26,0:26:78.21:0,78,1336	0/0:24,0:24:72.23:0,72,1312	0/0:9,0:9:27.09:0,27,486
chr10	108476297	.	TA	T	6230.09	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=12.571;DP=698;FS=2.100;HRun=9;HaplotypeScore=71.6678;InbreedingCoeff=0.9975;MQ=85.58;MQ0=1;MQRankSum=-3.132;QD=23.07;ReadPosRankSum=1.260;VQSLOD=5.7900;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:78.04:714,78,0	1/1:0,11:11:27.01:247,27,0	0/0:27,0:27:57.63:0,58,646	0/0:23,0:21:47.79:0,48,451	0/0:28,0:28:78.22:0,78,892	0/0:29,1:31:62.62:0,63,946	0/0:37,0:37:96.27:0,96,1098	1/1:4,27:31:81.03:741,81,0	0/0:26,0:26:72.20:0,72,820	0/0:27,0:27:75.22:0,75,866	0/0:26,0:26:69.20:0,69,788	0/0:28,0:28:75.14:0,75,840	0/0:27,0:27:78.21:0,78,881	0/0:19,0:19:54.11:0,54,602	0/0:21,0:21:57.16:0,57,648	0/0:27,0:27:72.16:0,72,807	1/1:2,24:26:57.03:522,57,0	1/1:1,15:16:45.02:412,45,0	1/1:1,20:21:60.03:549,60,0	1/1:5,33:38:68.44:799,68,0	1/1:5,33:38:90.04:824,90,0	0/0:22,0:22:66.16:0,66,732	0/0:22,0:22:57.17:0,57,658	0/0:20,0:20:60.18:0,60,692	0/0:17,0:17:42.12:0,42,485	1/1:0,20:20:57.01:517,57,0	1/1:2,32:34:83.58:768,84,0	1/1:1,5:6:15.01:137,15,0
chr10	108478084	.	TC	T	3581.72	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=11.581;DP=524;FS=14.159;HRun=9;HaplotypeScore=75.2388;InbreedingCoeff=0.9609;MQ=78.38;MQ0=0;MQRankSum=-6.815;QD=19.47;ReadPosRankSum=-0.620;VQSLOD=2.5476;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,19:27:38.99:357,39,0	1/1:1,9:10:27.01:247,27,0	0/0:15,0:14:32.43:0,32,334	0/0:19,0:18:26.77:0,27,338	0/0:12,0:12:33.10:0,33,380	0/0:23,2:25:8.25:0,8,603	0/0:23,2:25:2.29:0,2,534	1/1:7,20:26:57.01:517,57,0	0/0:21,0:21:57.14:0,57,638	0/0:21,1:22:26.60:0,27,528	0/0:10,0:10:30.08:0,30,337	0/0:30,0:30:76.43:0,76,840	0/0:17,0:17:48.10:0,48,525	0/0:25,0:25:69.20:0,69,788	0/0:19,0:19:48.13:0,48,543	0/0:27,0:27:72.21:0,72,830	1/1:0,9:9:24.01:220,24,0	1/1:2,12:14:30.01:274,30,0	1/1:1,9:10:27.01:247,27,0	1/1:3,10:13:27.01:246,27,0	1/1:10,16:26:36:329,36,0	0/0:8,0:9:23.89:0,24,247	0/0:24,0:24:63.19:0,63,726	0/0:22,0:22:60.18:0,60,692	0/0:18,0:18:48.11:0,48,533	1/1:2,22:24:31.42:542,31,0	1/1:2,13:15:39.02:357,39,0	1/1:0,9:9:27.01:247,27,0
chr10	108478120	.	T	TATACAC	4000.07	PASS	AB=0.836;AC=11;AF=0.196;AN=56;BaseQRankSum=7.677;DP=590;FS=6.072;HRun=0;HaplotypeScore=162.3432;InbreedingCoeff=-0.0694;MQ=61.52;MQ0=2;MQRankSum=-7.519;QD=17.70;ReadPosRankSum=-0.946;VQSLOD=2.5755;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,11:19:3.01:0,3,44	0/1:11,4:15:32.50:130,0,33	0/0:15,0:12:27.06:0,27,508	0/0:17,0:11:17.45:0,17,185	0/0:13,0:13:36.09:0,36,776	0/0:20,0:20:57.18:0,57,1297	0/0:16,0:16:48.16:0,48,1100	0/1:28,5:33:99:758,0,741	0/0:15,0:15:45.12:0,45,877	0/0:33,0:33:96.33:0,96,2307	0/0:16,0:15:42.13:0,42,930	0/0:31,0:31:93.30:0,93,2118	0/0:20,0:20:57.20:0,57,1343	0/0:16,0:16:48.13:0,48,1031	0/0:20,0:20:60.18:0,60,1319	0/0:23,0:23:63.22:0,63,1457	0/1:16,1:18:36.88:146,0,37	0/1:20,2:23:99:342,0,172	0/1:9,8:19:99:946,0,247	0/1:13,6:27:62.79:83,0,63	1/1:10,5:16:6.02:87,6,0	0/0:18,0:18:48.61:0,49,945	0/0:23,0:23:60.18:0,60,1401	0/0:31,0:31:87.26:0,87,1994	0/0:17,0:17:45.14:0,45,1055	0/1:18,6:35:99:823,0,832	0/1:10,6:22:99:459,0,212	0/1:7,2:14:99:226,0,108
chr10	108478125	.	ATG	A	884.52	PASS	AB=0.963;AC=22;AF=0.393;AN=56;BaseQRankSum=7.172;DP=572;FS=1.239;HRun=0;HaplotypeScore=106.9966;InbreedingCoeff=0.2904;MQ=57.10;MQ0=8;MQRankSum=-4.096;QD=2.99;ReadPosRankSum=0.005;VQSLOD=2.4722;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:2.82:0,3,25	0/0:12,0:12:9.21:0,9,79	0/0:15,0:9:0.47:0,0,1	0/0:16,1:9:0.47:0,0,1	0/0:12,0:12:20.99:0,21,296	0/0:18,1:19:7.63:0,8,543	0/1:17,1:18:41.37:41,0,279	1/1:31,0:30:8.99:79,9,0	0/1:13,1:14:10.29:10,0,254	0/0:37,0:37:54.17:0,54,780	0/1:13,1:13:4.37:4,0,375	0/0:31,0:31:22.70:0,23,780	0/0:21,0:21:4.53:0,5,463	0/1:15,1:16:1.21:1,0,424	0/0:22,1:22:7.14:0,7,563	0/1:20,0:20:22.36:22,0,553	1/1:16,0:16:1.91:22,2,0	0/1:18,0:18:6.83:7,0,206	0/1:25,0:22:2.29:135,0,2	1/1:25,1:25:9:83,9,0	1/1:17,0:17:2.99:24,3,0	0/1:17,1:18:35.73:36,0,385	0/0:18,2:20:4.67:0,5,515	0/0:30,3:32:34.78:0,35,987	0/0:17,0:17:36.12:0,36,554	1/1:29,0:31:41.67:406,42,0	1/1:20,0:20:11.37:91,11,0	1/1:12,0:11:11.88:90,12,0
chr10	108478486	.	CT	C	515.88	PASS	AB=0.898;AC=25;AF=0.446;AN=56;BaseQRankSum=10.653;DP=412;FS=1.549;HRun=13;HaplotypeScore=80.2894;InbreedingCoeff=0.5750;MQ=80.93;MQ0=1;MQRankSum=-3.033;QD=1.99;ReadPosRankSum=2.762;VQSLOD=-0.7604;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:40,1:41:45.47:124,45,0	0/1:4,0:4:2.52:3,0,23	0/0:19,0:18:22.64:0,23,169	0/1:15,1:14:43.84:44,0,75	0/0:7,0:7:12.02:0,12,117	0/0:23,0:23:32.91:0,33,302	0/0:17,1:20:25.91:0,26,384	1/1:19,0:19:21.53:64,22,0	0/0:17,0:17:31.72:0,32,272	0/0:15,0:16:29.87:0,30,271	0/0:8,0:8:18.02:0,18,170	0/0:12,0:12:17.99:0,18,161	0/1:12,2:14:13.84:14,0,161	0/0:10,0:10:3.83:0,4,170	0/1:5,1:7:10.07:10,0,55	0/0:6,0:6:11.95:0,12,99	1/1:30,0:30:29.52:77,30,0	1/1:18,0:18:17.09:45,17,0	1/1:20,0:20:19.34:73,19,0	1/1:9,1:10:14.11:51,14,0	1/1:10,0:10:12.42:32,12,0	0/0:4,0:4:9:0,9,83	0/0:2,0:2:6:0,6,53	0/1:12,4:16:51.26:51,0,177	0/0:8,1:9:2.13:0,2,181	1/1:21,0:21:18.25:58,18,0	1/1:15,0:14:11.34:31,11,0	1/1:18,0:18:15.11:44,15,0
chr10	108478498	.	TTC	T	5211.85	PASS	AB=0.786;AC=22;AF=0.393;AN=56;BaseQRankSum=8.353;DP=412;FS=2.449;HRun=0;HaplotypeScore=67.1914;InbreedingCoeff=0.8566;MQ=89.46;MQ0=1;MQRankSum=-2.355;QD=23.69;ReadPosRankSum=3.702;VQSLOD=5.0570;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,35:39:79.30:986,79,0	0/1:1,3:4:8.13:70,0,8	0/0:27,0:25:2.86:0,3,330	0/1:22,0:20:0.71:1,0,185	0/0:7,0:7:21.05:0,21,299	0/0:21,0:21:63.12:0,63,844	0/0:20,0:20:60:0,60,869	1/1:0,23:23:62.30:668,62,0	0/0:15,0:15:43:0,43,635	0/0:15,0:15:45.08:0,45,623	0/0:8,0:8:24.05:0,24,352	0/0:7,0:7:21.06:0,21,326	0/0:13,0:13:35.89:0,36,484	0/0:11,0:11:32.09:0,32,419	0/0:5,0:5:14.94:0,15,194	0/0:6,0:6:18.01:0,18,187	1/1:0,29:29:57.19:754,57,0	1/1:0,16:16:33.11:437,33,0	1/1:4,14:18:41.87:440,42,0	1/1:7,7:14:38.41:377,38,0	1/1:0,11:11:24.08:318,24,0	0/0:5,0:5:14.99:0,15,176	0/0:4,0:4:12:0,12,128	0/0:16,0:16:44.67:0,45,533	0/0:12,0:12:35.99:0,36,508	1/1:1,17:18:53.95:576,54,0	1/1:1,10:11:21.05:261,21,0	1/1:1,14:15:26.12:323,26,0
chr10	108478499	.	TC	T	2593.37	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=10.737;DP=412;FS=1.983;HRun=4;HaplotypeScore=67.9009;InbreedingCoeff=0.9075;MQ=88.63;MQ0=1;MQRankSum=-0.997;QD=11.53;ReadPosRankSum=3.239;VQSLOD=1.2485;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,2:39:79.48:514,79,0	1/1:4,0:4:4.26:32,4,0	0/1:27,0:25:1.39:1,0,190	0/0:21,0:19:8.73:0,9,162	0/0:7,0:7:21.03:0,21,218	0/0:22,0:22:63.06:0,63,641	0/0:21,0:21:60.89:0,61,627	1/1:23,0:23:58.58:390,59,0	0/0:15,0:15:39.10:0,39,448	0/0:14,0:14:42.03:0,42,442	0/0:7,0:7:21.05:0,21,240	0/0:7,0:7:18.04:0,18,211	0/0:13,0:13:30.13:0,30,315	0/0:11,0:11:28.85:0,29,283	0/0:5,0:5:13.13:0,13,116	0/0:6,0:6:11.81:0,12,102	1/1:29,0:29:55.86:338,56,0	1/1:16,0:16:32.34:196,32,0	1/1:15,3:18:47.30:353,47,0	1/1:14,0:14:34.84:204,35,0	1/1:11,0:11:23.54:143,24,0	0/0:5,0:5:11.99:0,12,121	0/0:5,0:5:12.01:0,12,114	0/0:16,0:16:32.20:0,32,315	0/0:12,0:12:33.91:0,34,355	1/1:17,1:18:50.31:339,50,0	1/1:11,0:11:20.58:124,21,0	1/1:14,1:15:26.53:177,27,0
chr10	108481428	.	TC	T	7773.72	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.455;DP=809;FS=0.889;HRun=7;HaplotypeScore=80.1677;InbreedingCoeff=0.9988;MQ=74.38;MQ0=0;MQRankSum=-2.687;QD=26.00;ReadPosRankSum=-0.133;VQSLOD=5.2109;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,51:57:99:1438,141,0	1/1:2,13:15:39.04:386,39,0	0/0:17,0:17:44.51:0,45,535	0/0:24,0:23:38.66:0,39,426	0/0:25,0:25:72.22:0,72,891	0/0:22,0:22:63.19:0,63,779	0/0:34,0:34:93.25:0,93,1129	1/1:6,19:25:57.07:554,57,0	0/0:40,0:40:99:0,114,1409	0/0:35,0:35:90.28:0,90,1119	0/0:18,0:18:51.16:0,51,638	0/0:58,0:58:99:0,163,2019	0/0:29,0:29:81.23:0,81,993	0/0:34,0:34:96.31:0,96,1207	0/0:31,0:31:87.26:0,87,1072	0/0:41,0:41:99:0,114,1434	1/1:2,32:34:87.20:887,87,0	1/1:2,25:27:75.13:754,75,0	1/1:3,19:22:57.12:580,57,0	1/1:1,16:17:48.11:489,48,0	1/1:6,33:39:93.20:949,93,0	0/0:23,0:23:60.19:0,60,755	0/0:21,0:21:57.17:0,57,703	0/0:29,0:29:84.19:0,84,1013	0/0:29,0:29:84.27:0,84,1054	1/1:4,30:34:55.49:880,55,0	1/1:1,22:23:66.15:673,66,0	1/1:0,6:6:18.04:184,18,0
chr10	108482247	.	AT	A	2685.48	PASS	AB=0.656;AC=20;AF=0.370;AN=54;BaseQRankSum=7.539;DP=315;FS=31.731;HRun=10;HaplotypeScore=47.9448;InbreedingCoeff=0.5976;MQ=69.34;MQ0=5;MQRankSum=-0.296;QD=15.09;ReadPosRankSum=3.363;VQSLOD=1.8844;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,27:35:63.21:629,63,0	1/1:0,3:3:5.97:46,6,0	0/0:21,0:11:18.31:0,18,178	0/0:22,1:12:27.70:0,28,185	0/0:8,0:8:24.03:0,24,241	0/0:17,0:17:45.11:0,45,487	0/1:5,1:7:8.17:8,0,129	1/1:6,14:20:41.97:364,42,0	./.	0/0:11,0:9:21.05:0,21,229	0/0:13,0:13:13.75:0,14,301	0/0:6,0:6:15.02:0,15,151	0/0:4,0:4:9.02:0,9,99	0/0:3,0:3:6.02:0,6,66	0/0:2,0:2:3.01:0,3,33	0/0:7,0:6:18.05:0,18,199	1/1:4,21:24:24.53:385,25,0	1/1:7,26:33:62.98:547,63,0	1/1:1,8:9:6.47:182,6,0	0/1:2,5:7:18.19:89,0,18	1/1:1,5:6:11.99:104,12,0	0/0:1,0:1:3.01:0,3,33	0/0:3,0:3:9.02:0,9,100	0/0:4,0:3:6.02:0,6,66	0/0:13,0:13:35.92:0,36,372	0/1:3,10:13:0.20:226,0,0	1/1:2,9:10:20.89:182,21,0	0/1:3,6:9:14.96:112,0,15
chr10	108483322	.	C	CT	10903.84	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-13.680;DP=610;FS=0.000;HRun=0;HaplotypeScore=61.8327;InbreedingCoeff=0.9788;MQ=85.64;MQ0=0;MQRankSum=-0.992;QD=41.78;ReadPosRankSum=0.096;VQSLOD=5.1647;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:36:87.28:1365,87,0	1/1:0,6:6:18.06:287,18,0	0/0:22,0:22:20.20:0,20,655	0/0:16,0:17:48.12:0,48,668	0/0:16,0:16:42.14:0,42,579	0/0:21,0:21:57.17:0,57,794	0/0:28,0:28:78.21:0,78,1031	1/1:1,23:24:69.22:1074,69,0	0/0:26,0:26:78.22:0,78,1066	0/0:17,0:17:42.10:0,42,565	0/0:6,0:6:15.05:0,15,210	0/0:31,0:31:90.23:0,90,1214	0/0:27,0:27:78.26:0,78,1088	0/0:31,0:31:90.29:0,90,1237	0/0:25,0:25:72.24:0,72,1005	0/0:21,0:21:57.15:0,57,760	1/1:0,30:30:84.29:1343,84,0	1/1:0,33:33:87.30:1391,87,0	1/1:0,19:19:54.18:830,54,0	1/1:0,4:4:12.04:191,12,0	1/1:2,42:44:99:1677,105,0	0/0:12,0:12:33.07:0,33,438	0/0:5,0:5:12.04:0,12,167	0/0:29,0:29:87.29:0,87,1214	0/0:15,0:15:36.01:0,36,477	1/1:2,19:21:9.23:685,9,0	1/1:0,35:35:99:1630,102,0	1/1:0,9:9:27.09:431,27,0
chr10	108483916	.	T	TGCCGG	19150.54	PASS	AB=0.563;AC=21;AF=0.375;AN=56;BaseQRankSum=-10.990;DP=732;FS=0.000;HRun=0;HaplotypeScore=136.1967;InbreedingCoeff=0.9226;MQ=85.10;MQ0=0;MQRankSum=-11.941;QD=64.70;ReadPosRankSum=-1.090;VQSLOD=5.4957;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:26:51.99:1858,52,0	1/1:3,9:13:30.10:901,30,0	0/0:24,0:24:69.23:0,69,1354	0/0:28,0:28:30.08:0,30,1265	0/0:11,0:11:30.09:0,30,601	0/0:24,0:24:69.24:0,69,1471	0/0:37,0:37:99:0,111,2279	1/1:8,22:33:87.04:2338,87,0	0/0:37,0:37:99:0,105,2168	0/0:19,0:19:48.15:0,48,957	0/0:7,0:7:21.07:0,21,429	0/0:45,0:45:99:0,123,2555	0/0:34,0:34:96.30:0,96,1984	0/0:28,0:28:81.26:0,81,1662	0/0:24,0:24:69.22:0,69,1432	0/0:39,0:39:99:0,114,2318	1/1:4,29:34:78.27:2418,78,0	1/1:7,35:44:99:3093,102,0	1/1:7,13:21:48.16:1419,48,0	1/1:4,10:15:27.09:833,27,0	1/1:21,26:49:60.16:1730,60,0	0/0:10,0:10:30.10:0,30,626	0/0:10,0:10:27.09:0,27,575	0/0:43,0:43:99:0,117,2388	0/0:16,0:16:48.16:0,48,1017	0/1:6,21:27:46.33:2145,0,46	1/1:4,16:21:54.17:1562,54,0	1/1:5,7:13:30.10:853,30,0
chr10	108493158	.	A	AT	1676.35	PASS	AB=0.950;AC=8;AF=0.143;AN=56;BaseQRankSum=-6.365;DP=415;FS=11.804;HRun=11;HaplotypeScore=41.9826;InbreedingCoeff=0.5940;MQ=66.71;MQ0=0;MQRankSum=0.341;QD=13.20;ReadPosRankSum=-0.067;VQSLOD=1.7964;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:32:30.67:466,31,0	0/0:1,0:1:2.99:0,3,23	0/0:6,0:4:3.91:0,4,41	0/0:13,0:10:9.15:0,9,47	0/1:7,1:9:10.50:11,0,98	0/0:9,0:9:14.92:0,15,116	0/0:30,0:32:78.75:0,79,591	0/0:26,0:26:13.90:0,14,233	0/0:6,0:6:8.96:0,9,70	0/0:12,0:12:26.89:0,27,209	0/0:4,0:5:10.76:0,11,75	0/0:17,0:17:38.81:0,39,302	0/0:9,0:9:20.87:0,21,160	0/0:12,0:12:26.86:0,27,209	0/0:13,0:15:33.93:0,34,244	0/0:10,0:10:22.94:0,23,168	1/1:2,14:16:33.07:335,33,0	1/1:6,41:47:99:1006,102,0	0/1:23,0:23:7.75:8,0,314	0/0:3,0:4:7.99:0,8,52	0/0:15,0:16:28.89:0,29,215	0/0:5,0:5:11.94:0,12,93	0/0:8,0:8:11.91:0,12,93	0/0:27,0:27:68.69:0,69,534	0/0:13,0:13:32.82:0,33,253	0/0:19,1:20:17.36:0,17,318	0/0:10,0:10:14.88:0,15,116	0/0:12,0:12:35.85:0,36,276
chr10	108496697	.	TA	T	4092.24	PASS	AB=0.917;AC=25;AF=0.446;AN=56;BaseQRankSum=11.369;DP=548;FS=9.789;HRun=11;HaplotypeScore=56.8845;InbreedingCoeff=0.7442;MQ=73.03;MQ0=1;MQRankSum=-0.898;QD=15.38;ReadPosRankSum=0.769;VQSLOD=3.6740;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,26:32:71.91:591,72,0	1/1:0,3:3:8.99:74,9,0	0/0:18,1:15:2.05:0,2,172	0/1:14,0:12:5.14:5,0,52	0/1:15,3:18:25.79:26,0,367	0/0:26,2:28:26.11:0,26,666	0/0:22,0:22:57.14:0,57,608	1/1:4,13:18:40.67:304,41,0	0/0:9,1:11:8.28:0,8,277	0/0:16,0:16:48.11:0,48,505	0/1:15,2:17:1.38:1,0,374	0/0:29,2:31:38.24:0,38,806	0/0:18,0:18:48.12:0,48,511	0/0:23,0:23:66.17:0,66,703	0/0:24,0:24:60.14:0,60,634	0/0:18,1:19:20.45:0,20,413	1/1:7,26:34:76.92:622,77,0	1/1:1,25:27:70.95:572,71,0	1/1:3,14:17:41.93:341,42,0	1/1:0,16:17:43.91:344,44,0	1/1:1,16:19:37.03:283,37,0	0/0:8,0:8:0.32:0,0,171	0/0:14,1:16:17.22:0,17,358	0/0:32,0:32:78.26:0,78,887	0/0:13,1:15:14.18:0,14,316	1/1:3,21:24:59.88:486,60,0	1/1:2,15:17:38.95:320,39,0	1/1:0,9:9:14.98:123,15,0
chr10	108498938	.	T	TTTCC	6597.36	PASS	AB=0.744;AC=10;AF=0.179;AN=56;BaseQRankSum=5.803;DP=980;FS=52.927;HRun=0;HaplotypeScore=183.1293;InbreedingCoeff=0.2421;MQ=49.62;MQ0=17;MQRankSum=0.386;QD=24.80;ReadPosRankSum=-0.894;VQSLOD=2.6533;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:62.26:0,62,1177	0/0:13,0:13:21.07:0,21,328	0/0:33,0:5:12.01:0,12,150	0/0:33,0:12:18.53:0,19,290	0/0:35,0:35:69.13:0,69,1079	0/1:27,0:27:40.98:41,0,608	0/0:50,0:48:76.75:0,77,1501	0/1:29,4:27:99:389,0,135	0/0:32,0:31:60.15:0,60,911	0/0:44,0:44:93.17:0,93,1452	0/0:25,0:25:35.44:0,35,866	0/0:42,0:40:66.21:0,66,1019	0/0:45,0:45:99:0,108,1661	0/0:43,0:41:93.27:0,93,1415	0/0:37,0:37:78.22:0,78,1140	0/0:52,0:52:99:0,123,1926	0/0:39,0:39:50.88:0,51,1179	0/0:33,0:31:69.18:0,69,1078	1/1:12,12:20:11.26:668,11,0	0/1:6,11:20:36.55:339,0,37	1/1:25,48:71:15.61:2232,16,0	0/0:25,0:25:53.49:0,53,839	0/0:31,0:31:35.23:0,35,893	0/0:38,0:37:61.45:0,61,1276	0/0:28,0:28:10.53:0,11,665	0/1:14,12:29:45.61:740,0,46	0/1:12,17:30:92.75:1014,0,93	0/1:15,11:26:32.71:1176,0,33
chr10	108498988	.	TTTCC	T	4045.01	PASS	AB=0.878;AC=20;AF=0.357;AN=56;BaseQRankSum=6.857;DP=1152;FS=15.522;HRun=0;HaplotypeScore=269.2330;InbreedingCoeff=-0.5790;MQ=48.26;MQ0=37;MQRankSum=-7.513;QD=4.78;ReadPosRankSum=-1.224;VQSLOD=0.3553;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,2:46:49.35:0,49,2060	0/1:10,5:14:99:130,0,339	0/0:43,5:7:15.04:0,15,227	0/0:45,5:10:14.56:0,15,313	0/1:17,5:22:22.97:23,0,759	0/1:22,9:31:99:199,0,998	0/1:52,8:57:99:353,0,1957	0/0:36,0:30:13.20:0,13,1176	0/1:33,18:52:99:335,0,1821	0/1:42,4:44:99:386,0,1224	0/1:27,3:30:48.68:49,0,1112	0/1:42,7:46:99:271,0,1839	0/1:33,8:40:99:549,0,1050	0/1:52,7:57:99:305,0,2409	0/1:55,6:60:99:220,0,2606	0/1:58,3:62:99:320,0,2680	0/0:42,0:40:47.49:0,47,2246	0/1:37,2:36:14.90:15,0,1855	0/0:23,0:17:51.17:0,51,1232	0/1:24,3:26:92.64:93,0,1147	0/1:60,3:60:38.38:38,0,2520	0/0:29,4:34:10.47:0,10,1073	0/1:22,4:26:99:122,0,1000	0/1:47,2:49:94.18:94,0,2519	0/1:31,11:41:99:403,0,1398	0/1:31,1:31:23.53:24,0,1499	0/1:34,4:37:99:115,0,1816	0/0:25,1:25:2.05:0,2,890
chr10	108499038	.	TTTCC	T	2059.78	PASS	AB=0.803;AC=7;AF=0.125;AN=56;BaseQRankSum=-3.900;DP=1071;FS=8.009;HRun=0;HaplotypeScore=322.1544;InbreedingCoeff=-0.1465;MQ=43.59;MQ0=38;MQRankSum=1.352;QD=10.30;ReadPosRankSum=1.025;VQSLOD=1.1026;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:83.91:0,84,1552	0/0:7,0:7:15.05:0,15,309	0/0:42,0:8:18:0,18,345	0/0:47,0:10:9.03:0,9,121	0/0:25,0:25:51.60:0,52,1127	0/0:23,0:22:48.04:0,48,864	0/0:57,1:54:83.49:0,83,2301	0/1:30,2:20:77.41:77,0,207	0/0:53,0:50:99:0,112,2339	0/0:54,0:49:94.60:0,95,1648	0/0:19,0:18:33.09:0,33,648	0/0:58,0:55:99:0,115,2037	0/0:46,0:43:92.89:0,93,1665	0/0:53,0:49:99:0,108,1908	0/0:64,0:56:99:0,120,2215	0/0:78,0:72:99:0,171,3277	0/0:32,0:31:47.73:0,48,1446	0/0:44,0:42:48.29:0,48,1808	0/1:21,5:16:50.27:184,0,50	0/1:12,6:18:61.77:327,0,62	0/1:36,13:45:99:379,0,736	0/0:31,0:30:54.56:0,55,945	0/0:21,0:21:36.10:0,36,702	0/0:40,0:37:84.27:0,84,1643	0/0:35,0:34:63.19:0,63,1344	0/1:25,7:30:99:332,0,634	0/1:15,7:19:99:396,0,295	0/1:13,8:21:99:494,0,360
chr10	108499058	.	CCCT	C	3070.29	PASS	AB=0.890;AC=20;AF=0.357;AN=56;BaseQRankSum=3.032;DP=759;FS=62.965;HRun=0;HaplotypeScore=229.7159;InbreedingCoeff=-0.5561;MQ=43.65;MQ0=23;MQRankSum=-4.439;QD=5.18;ReadPosRankSum=-2.047;VQSLOD=0.8323;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:29:83.14:83,0,1157	0/1:5,0:6:7.63:8,0,234	0/0:29,0:8:18.06:0,18,307	0/0:21,0:5:9.02:0,9,140	0/1:17,3:20:3.39:3,0,1103	0/0:14,0:13:31.36:0,31,737	0/1:37,9:43:99:365,0,1812	0/1:15,2:12:89.09:89,0,264	0/1:36,3:37:99:121,0,1987	0/1:23,10:32:99:377,0,1246	0/1:11,2:13:78.42:78,0,621	0/1:32,11:41:99:495,0,1397	0/1:30,5:34:99:218,0,1458	0/1:31,7:36:99:328,0,1517	0/1:38,7:40:99:223,0,1909	0/1:54,10:62:99:376,0,2972	0/0:20,0:24:7.10:0,7,1308	0/1:34,1:35:48.11:48,0,1671	0/1:23,1:10:30.16:30,0,418	0/0:8,1:9:6.08:0,6,285	0/0:32,0:32:41.21:0,41,1329	0/1:17,5:21:99:171,0,887	0/1:10,2:12:78.41:78,0,623	0/1:24,3:24:48.32:48,0,1279	0/1:19,3:22:71.51:72,0,1134	0/0:17,0:18:15.83:0,16,806	0/1:18,0:16:13.86:14,0,576	0/0:16,0:17:29.53:0,30,610
chr10	108499417	.	TTAC	T	454.38	PASS	AB=0.939;AC=12;AF=0.240;AN=50;BaseQRankSum=7.530;DP=517;FS=24.865;HRun=0;HaplotypeScore=233.7842;InbreedingCoeff=0.4794;MQ=44.43;MQ0=8;MQRankSum=-7.008;QD=5.05;ReadPosRankSum=-1.653;VQSLOD=0.7322;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:21.22:167,21,0	1/1:4,0:4:5.81:32,6,0	0/0:8,0:1:3.01:0,3,41	0/0:18,0:7:13.01:0,13,155	0/0:22,0:22:47.64:0,48,546	0/0:10,0:10:26.97:0,27,366	0/0:28,0:28:65.97:0,66,736	./.	0/0:32,0:32:84.37:0,84,1102	0/0:36,0:34:89.35:0,89,1182	0/0:15,0:15:35.39:0,35,405	0/0:40,0:38:99:0,105,1379	0/0:40,0:39:99:0,104,1227	0/0:38,0:37:86.24:0,86,1385	0/0:45,0:45:99:0,117,1396	0/0:30,0:30:71.48:0,71,1012	0/1:9,1:10:0.80:124,0,1	0/1:9,0:9:0.14:90,0,0	0/1:9,0:5:7.50:20,0,8	./.	0/1:8,0:7:5.57:13,0,6	0/0:18,0:18:32.88:0,33,433	0/0:21,0:21:47.53:0,48,525	0/1:31,1:32:74.55:75,0,337	0/0:21,0:21:50.66:0,51,618	0/1:5,1:5:0.94:66,0,1	1/1:1,0:1:2.92:17,3,0	./.
chr10	108499418	.	TAC	T	141.82	PASS	AB=0.936;AC=12;AF=0.240;AN=50;BaseQRankSum=8.799;DP=500;FS=24.530;HRun=0;HaplotypeScore=218.8914;InbreedingCoeff=0.3092;MQ=44.77;MQ0=8;MQRankSum=-5.632;QD=1.63;ReadPosRankSum=-0.935;VQSLOD=1.0018;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:10:16.10:93,16,0	1/1:3,0:3:4.31:14,4,0	0/0:7,0:1:3.01:0,3,44	0/0:17,0:7:12.02:0,12,154	0/0:21,0:21:48.08:0,48,547	0/0:9,0:9:27.09:0,27,368	0/0:26,0:26:69.08:0,69,758	./.	0/0:32,0:32:87.22:0,87,1066	0/0:34,0:32:90.09:0,90,1063	0/0:14,0:14:36.04:0,36,428	0/0:40,0:38:99:0,105,1304	0/0:40,0:39:99:0,108,1314	0/0:37,0:36:93.43:0,93,1269	0/0:45,0:45:99:0,126,1453	0/0:30,0:30:87.11:0,87,1061	0/1:10,0:10:20.50:49,0,21	0/1:8,0:8:33.82:34,0,40	0/1:8,1:5:4.21:4,0,21	./.	0/1:6,3:7:0.87:47,0,1	0/0:16,0:16:33.07:0,33,431	0/0:19,0:19:48.09:0,48,583	0/1:30,1:31:11.05:11,0,312	0/0:20,0:20:51.07:0,51,591	0/1:6,0:5:21.76:22,0,26	1/1:1,0:1:2.60:10,3,0	./.
chr10	108499483	.	TGAC	T	129.06	PASS	AC=8;AF=0.182;AN=44;BaseQRankSum=3.597;DP=421;FS=5.685;HRun=0;HaplotypeScore=226.8305;InbreedingCoeff=0.6936;MQ=50.96;MQ0=4;MQRankSum=-2.905;QD=14.34;ReadPosRankSum=-1.537;VQSLOD=2.7596;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,1:3:4.57:59,5,0	./.	0/0:9,0:4:2.80:0,3,142	0/0:14,0:6:8.73:0,9,114	0/0:12,0:12:24.08:0,24,415	0/0:13,0:13:36.12:0,36,629	0/0:31,0:31:78.27:0,78,1322	./.	0/0:34,0:33:70.20:0,70,1246	0/0:28,0:26:75.26:0,75,1266	0/0:9,0:9:24.08:0,24,421	0/0:26,0:26:69.24:0,69,1230	0/0:25,0:25:57.20:0,57,1011	0/0:31,0:30:81.25:0,81,1406	0/0:45,0:45:99:0,114,1989	0/0:38,0:38:99:0,114,2008	1/1:1,1:2:3.01:55,3,0	1/1:1,2:3:5.81:111,6,0	./.	./.	1/1:0,1:1:2.98:22,3,0	0/0:25,0:24:60.21:0,60,1026	0/0:13,0:13:27.09:0,27,488	0/0:39,0:39:83.85:0,84,1405	0/0:18,0:18:42.14:0,42,756	0/0:1,0:1:3.01:0,3,52	./.	./.
chr10	108499497	.	TC	T	279.25	PASS	AB=1.000;AC=13;AF=0.283;AN=46;BaseQRankSum=6.922;DP=448;FS=11.952;HRun=2;HaplotypeScore=208.3985;InbreedingCoeff=0.7699;MQ=55.08;MQ0=4;MQRankSum=-3.023;QD=9.31;ReadPosRankSum=-3.049;VQSLOD=-0.7088;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,4:5:11.99:135,12,0	./.	0/1:12,0:7:5.32:5,0,52	0/0:20,0:9:16.83:0,17,168	0/0:9,0:9:27.08:0,27,398	0/0:17,0:17:51.17:0,51,814	0/0:37,0:37:90.28:0,90,1389	./.	0/0:30,0:29:78.27:0,78,1243	0/0:28,0:26:72.24:0,72,1135	0/0:9,0:9:27.09:0,27,431	0/0:25,0:25:66.21:0,66,1027	0/0:25,0:25:57.19:0,57,882	0/0:29,0:28:78.27:0,78,1239	0/0:47,0:47:99:0,135,2090	0/0:39,0:39:99:0,111,1760	1/1:1,1:2:2.94:18,3,0	1/1:2,2:4:8.05:83,8,0	1/1:2,2:3:8.39:92,8,0	./.	1/1:1,0:1:2.74:12,3,0	0/0:26,0:25:63.21:0,63,988	0/0:14,0:14:36.12:0,36,572	0/0:41,0:41:84.63:0,85,1418	0/0:21,0:21:51.17:0,51,809	1/1:0,2:2:6.02:84,6,0	./.	./.
chr10	108499510	.	TCAA	T	207.86	PASS	AB=0.883;AC=12;AF=0.250;AN=48;BaseQRankSum=6.296;DP=453;FS=5.847;HRun=0;HaplotypeScore=199.0132;InbreedingCoeff=0.5417;MQ=55.52;MQ0=3;MQRankSum=-6.712;QD=4.42;ReadPosRankSum=-5.429;VQSLOD=0.0568;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:4.60:19,5,0	./.	0/0:12,0:8:14.15:0,14,221	0/0:19,0:8:14.47:0,14,186	0/0:11,0:11:5.81:0,6,246	0/0:22,0:22:38.86:0,39,450	0/0:33,0:33:69.81:0,70,769	./.	0/0:31,0:30:49.85:0,50,571	0/1:27,1:25:59.59:60,0,309	0/0:12,0:12:32.95:0,33,310	0/0:25,0:25:36.76:0,37,525	0/0:20,0:20:45.39:0,45,437	0/0:38,0:38:80.91:0,81,764	0/0:43,0:43:98.64:0,99,1001	0/0:40,0:40:34.82:0,35,875	./.	1/1:3,2:5:11.69:140,12,0	0/1:3,1:4:48.31:48,0,51	./.	1/1:2,1:3:3.48:60,3,0	0/0:21,0:21:59.84:0,60,542	0/0:13,0:13:4.99:0,5,143	0/0:44,0:44:54.91:0,55,913	0/0:20,0:20:44.87:0,45,425	1/1:2,0:2:4.26:13,4,0	0/0:1,0:1:1.25:0,1,3	1/1:1,0:1:2.22:7,2,0
chr10	108499514	.	TTC	T	54.94	PASS	AB=0.663;AC=10;AF=0.208;AN=48;BaseQRankSum=6.670;DP=472;FS=7.057;HRun=0;HaplotypeScore=179.4242;InbreedingCoeff=0.4537;MQ=55.62;MQ0=4;MQRankSum=-4.581;QD=2.39;ReadPosRankSum=-0.369;VQSLOD=1.5336;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:1,4:5:11.30:33,0,11	./.	0/0:15,0:9:14.06:0,14,175	0/0:21,0:8:14.51:0,15,193	0/0:13,0:13:36.11:0,36,624	0/0:22,0:22:63.21:0,63,1139	0/0:36,0:36:99:0,102,1857	./.	0/0:30,0:29:75.25:0,75,1301	0/0:27,0:25:66.15:0,66,1079	0/0:13,0:13:33.11:0,33,609	0/0:28,0:28:66.22:0,66,1156	0/0:23,0:23:54.18:0,54,941	0/0:35,0:35:96.33:0,96,1743	0/0:41,0:41:99:0,120,2176	0/0:40,0:40:99:0,108,1915	./.	0/1:3,2:5:8.88:47,0,9	0/1:3,2:4:14.50:35,0,15	./.	0/1:2,2:4:0.32:5,0,0	0/0:24,0:24:69.21:0,69,1197	0/0:15,0:15:30.06:0,30,466	0/0:45,0:45:99:0,108,1993	0/0:18,0:18:48.16:0,48,857	1/1:0,2:2:5.88:35,6,0	1/1:0,1:1:2.50:9,2,0	1/1:0,1:1:2.97:20,3,0
chr10	108499532	.	C	CCCT	2277.15	PASS	AB=0.704;AC=14;AF=0.250;AN=56;BaseQRankSum=1.717;DP=619;FS=19.781;HRun=0;HaplotypeScore=171.4373;InbreedingCoeff=0.1521;MQ=48.52;MQ0=18;MQRankSum=-6.085;QD=20.15;ReadPosRankSum=-2.175;VQSLOD=1.6554;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,5:16:67.82:414,0,68	0/1:4,0:5:46.03:46,0,71	0/0:18,0:4:12.04:0,12,220	0/0:27,0:9:5.21:0,5,212	0/0:13,0:13:36.11:0,36,639	0/0:23,0:22:66.23:0,66,1228	0/0:44,1:45:52.96:0,53,2189	0/1:16,3:16:99:346,0,154	0/0:35,0:35:93.26:0,93,1657	0/0:29,0:26:78.27:0,78,1444	0/0:15,0:15:45.15:0,45,816	0/0:34,0:33:87.28:0,87,1544	0/0:27,0:26:60.21:0,60,1115	0/0:36,0:36:90.31:0,90,1670	0/0:51,0:51:99:0,123,2164	0/0:38,0:38:99:0,114,1898	0/1:1,8:8:58.66:139,0,59	1/1:2,5:7:9.42:197,9,0	0/1:10,4:10:99:255,0,177	0/1:5,2:7:97.69:131,0,98	1/1:0,12:12:10.59:274,11,0	0/0:20,0:20:57.15:0,57,1022	0/0:14,0:14:36.12:0,36,669	0/0:55,0:55:99:0,142,2468	0/0:24,1:24:63.13:0,63,1097	0/1:4,9:12:45.72:459,0,46	0/1:2,4:7:46.33:118,0,46	1/1:0,1:1:3.01:61,3,0
chr10	108501996	.	TAC	T	875.51	PASS	AB=0.952;AC=27;AF=0.519;AN=52;BaseQRankSum=6.753;DP=623;FS=1.288;HRun=0;HaplotypeScore=102.9137;InbreedingCoeff=-0.2808;MQ=62.47;MQ0=11;MQRankSum=-0.410;QD=1.99;ReadPosRankSum=3.129;VQSLOD=1.9149;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:40:5.85:37,6,0	1/1:7,0:7:2.94:18,3,0	0/0:26,0:20:0.47:0,0,1	./.	0/1:29,4:33:43.61:44,0,509	0/1:11,1:11:17.91:18,0,165	0/0:33,0:32:9.41:0,9,505	0/1:28,0:25:21.16:21,0,31	0/1:14,2:16:13.94:57,0,14	0/1:25,3:28:22.55:23,0,289	0/1:15,1:16:38.65:39,0,76	0/1:12,3:15:20.98:21,0,78	1/1:4,11:15:24.06:264,24,0	1/1:9,9:18:12.03:132,12,0	0/1:26,0:27:1.54:2,0,140	0/0:24,0:23:33.03:0,33,415	0/1:18,0:18:7.99:8,0,38	0/1:11,0:10:21.46:27,0,21	1/1:12,0:12:7.09:29,7,0	./.	0/1:28,0:26:5.25:81,0,5	0/1:18,2:20:33.80:34,0,289	0/1:14,0:15:8.83:9,0,222	0/0:50,0:49:87.21:0,87,1204	0/1:15,2:17:41.83:42,0,180	0/1:27,0:24:8.88:88,0,9	0/1:21,0:21:9.62:10,0,18	0/1:12,0:12:2.01:26,0,2
chr10	108502030	.	CACACACAGAG	C	1984.16	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=5.238;DP=603;FS=5.979;HRun=0;HaplotypeScore=153.7861;InbreedingCoeff=0.6145;MQ=47.73;MQ0=29;MQRankSum=-5.497;QD=9.73;ReadPosRankSum=-3.272;VQSLOD=1.6017;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:15.36:146,15,0	1/1:3,0:3:3.01:36,3,0	0/0:14,0:7:12.43:0,12,136	0/0:24,0:9:14.92:0,15,203	0/0:32,0:29:64.25:0,64,1463	0/0:11,0:8:15.02:0,15,424	0/0:37,0:36:89.96:0,90,2267	1/1:31,0:22:11.23:364,11,0	0/0:13,0:13:24.08:0,24,613	0/0:29,0:27:48.65:0,49,983	0/1:8,0:8:2.71:3,0,375	0/0:19,0:19:29.59:0,30,796	0/0:27,0:26:54.59:0,55,1000	0/0:20,0:20:30.10:0,30,627	0/0:29,0:29:50.96:0,51,1184	0/0:21,0:20:42.95:0,43,1425	0/1:20,0:19:31.09:113,0,31	0/1:10,0:10:21.57:90,0,22	1/1:9,0:6:12.01:200,12,0	0/0:5,11:14:0:0,0,0	0/1:43,0:35:99:164,0,128	0/0:19,0:16:28.03:0,28,984	0/0:15,0:15:37.37:0,37,966	0/0:57,0:56:99:0,141,4626	0/0:16,0:16:48.16:0,48,1234	1/1:29,0:25:37.47:667,37,0	1/1:2,7:8:9.92:198,10,0	1/1:11,0:9:13.24:190,13,0
chr10	108502034	.	CACAG	C	1545.59	PASS	AB=0.952;AC=18;AF=0.321;AN=56;BaseQRankSum=7.306;DP=595;FS=3.839;HRun=0;HaplotypeScore=106.5032;InbreedingCoeff=0.6196;MQ=47.41;MQ0=32;MQRankSum=-6.479;QD=7.85;ReadPosRankSum=-3.561;VQSLOD=1.5322;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:30:14.72:92,15,0	1/1:2,1:3:3.01:36,3,0	0/0:13,0:5:12.26:0,12,81	0/0:25,0:8:20.59:0,21,140	0/0:30,0:27:64.13:0,64,1025	0/0:12,0:9:18.01:0,18,353	0/0:35,0:34:89.69:0,90,1395	1/1:31,0:22:14:263,14,0	0/0:13,0:13:23.34:0,23,242	0/0:27,0:25:46.94:0,47,671	0/1:8,0:8:2.75:3,0,177	0/0:17,0:17:29.36:0,29,370	0/0:33,0:31:62.36:0,62,460	0/0:20,0:20:29.89:0,30,233	0/0:27,0:27:28.80:0,29,556	0/0:22,0:21:48:0,48,889	0/1:18,2:19:25.80:136,0,26	0/1:8,1:9:18.76:61,0,19	1/1:8,1:5:15:203,15,0	0/0:14,0:13:0:0,0,0	0/1:37,0:32:63.46:165,0,63	0/0:19,0:16:27.98:0,28,642	0/0:16,0:16:37.27:0,37,558	0/0:58,0:57:99:0,141,2721	0/0:16,0:16:48:0,48,632	1/1:26,1:23:38.07:521,38,0	1/1:9,0:8:9.90:99,10,0	1/1:10,0:9:10.72:155,11,0
chr10	108502036	.	CAGAG	C	2006.59	PASS	AB=0.939;AC=17;AF=0.304;AN=56;BaseQRankSum=5.352;DP=592;FS=14.368;HRun=0;HaplotypeScore=103.1624;InbreedingCoeff=0.6574;MQ=47.32;MQ0=35;MQRankSum=-6.195;QD=11.03;ReadPosRankSum=-4.871;VQSLOD=0.3299;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:29:9.92:122,10,0	1/1:3,0:3:2.94:18,3,0	0/0:14,0:6:14.12:0,14,177	0/0:28,0:8:23.05:0,23,261	0/0:29,0:26:54.63:0,55,1007	0/0:12,0:9:18.06:0,18,366	0/0:35,0:34:90.28:0,90,1734	1/1:12,16:21:44.60:457,45,0	0/0:13,0:13:24.08:0,24,409	0/0:26,0:24:52.81:0,53,824	0/0:8,0:8:12.02:0,12,201	0/0:17,0:17:31.35:0,31,572	0/0:33,0:31:62.05:0,62,906	0/0:20,0:20:30.10:0,30,465	0/0:28,0:28:49.38:0,49,860	0/0:21,0:21:45.05:0,45,916	0/1:20,0:19:24.46:161,0,24	0/1:7,0:9:9.89:51,0,10	1/1:8,0:5:15.02:228,15,0	0/0:15,0:13:0:0,0,0	0/1:38,0:31:91.24:91,0,111	0/0:20,0:17:18.32:0,18,693	0/0:16,0:16:39.01:0,39,674	0/0:58,0:57:99:0,141,2992	0/0:16,0:16:48.10:0,48,822	1/1:24,1:21:52.29:747,52,0	1/1:9,0:8:4.66:109,5,0	1/1:10,0:8:14.74:208,15,0
chr10	108502084	.	G	GAC	652.07	PASS	AB=0.943;AC=8;AF=0.148;AN=54;BaseQRankSum=5.914;DP=617;FS=0.000;HRun=0;HaplotypeScore=95.6713;InbreedingCoeff=0.0453;MQ=46.81;MQ0=34;MQRankSum=-1.012;QD=4.56;ReadPosRankSum=-3.571;VQSLOD=0.9022;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:35:7.65:0,8,78	./.	0/0:17,0:3:2.94:0,3,18	0/0:25,0:6:11.75:0,12,115	0/0:10,0:9:8.96:0,9,84	0/0:17,0:15:26.87:0,27,367	0/0:36,0:35:78.20:0,78,1028	1/1:24,0:9:3.44:21,3,0	0/0:12,0:12:30.09:0,30,387	0/0:18,0:15:40.88:0,41,522	0/0:16,0:14:29.87:0,30,364	0/0:25,0:24:53.66:0,54,703	0/0:31,0:30:70.75:0,71,882	0/0:26,0:26:54.04:0,54,706	0/0:34,0:34:33:0,33,460	0/0:21,0:19:48.15:0,48,633	0/0:19,0:19:20.06:0,20,81	0/0:10,0:9:1.57:0,2,9	0/1:11,2:6:24.84:56,0,25	0/1:17,1:18:7.75:111,0,8	0/1:36,3:32:99:113,0,114	0/0:26,0:25:29.61:0,30,369	0/0:13,0:11:23.96:0,24,287	0/0:55,0:53:99:0,111,1432	0/0:20,0:19:39.06:0,39,483	0/1:30,3:29:36.75:401,0,37	0/1:9,0:9:10:10,0,39	0/1:7,0:7:31.07:69,0,31
chr10	108502088	.	CAG	C	985.32	PASS	AB=0.989;AC=17;AF=0.315;AN=54;BaseQRankSum=7.443;DP=609;FS=16.521;HRun=0;HaplotypeScore=90.8205;InbreedingCoeff=0.2890;MQ=47.08;MQ0=34;MQRankSum=0.243;QD=3.96;ReadPosRankSum=-2.699;VQSLOD=0.3937;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,5:35:17.46:223,17,0	./.	1/1:14,0:2:2.03:6,2,0	0/0:22,0:5:5.14:0,5,67	0/0:10,0:9:8.91:0,9,89	0/0:18,0:16:28.20:0,28,491	0/0:33,0:32:59.35:0,59,746	1/1:22,0:7:7.30:44,7,0	0/0:14,0:14:22.13:0,22,348	0/0:19,0:17:19.26:0,19,424	0/0:17,0:15:19.24:0,19,471	0/0:24,1:24:6.23:0,6,660	0/0:31,0:30:63.06:0,63,868	0/0:25,0:25:52.03:0,52,852	0/0:32,1:33:17.17:0,17,552	0/0:21,0:19:11.21:0,11,570	1/1:4,16:20:23.59:329,24,0	1/1:3,7:9:5.71:70,6,0	0/1:15,0:7:10.63:41,0,11	0/1:18,1:19:11.12:53,0,11	0/1:35,1:29:65.13:65,0,76	0/1:23,0:22:8.32:8,0,334	0/0:14,0:12:6.96:0,7,246	0/0:54,0:52:57.85:0,58,1331	0/0:21,0:20:29.90:0,30,425	0/1:33,0:30:35.30:258,0,35	0/1:10,0:10:27.92:29,0,28	0/1:7,0:7:16.96:28,0,17
chr10	108502090	.	G	GAC	1162.62	PASS	AB=0.954;AC=15;AF=0.300;AN=50;BaseQRankSum=2.082;DP=620;FS=1.318;HRun=0;HaplotypeScore=96.6196;InbreedingCoeff=-0.1389;MQ=47.31;MQ0=31;MQRankSum=-0.715;QD=3.68;ReadPosRankSum=-3.137;VQSLOD=1.6097;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,2:35:47.97:53,0,48	./.	./.	./.	0/0:12,0:11:6.01:0,6,63	0/1:16,2:17:57.62:58,0,236	0/0:29,0:31:26.68:0,27,238	1/1:23,0:8:3.45:22,3,0	0/0:13,0:13:17.88:0,18,180	0/0:20,0:18:18.88:0,19,172	0/0:19,0:17:32.94:0,33,338	0/0:23,0:23:41.12:0,41,403	0/1:31,1:32:13.26:13,0,357	0/0:24,0:24:50.90:0,51,509	0/1:18,17:35:32.96:352,0,33	0/0:18,0:20:38.55:0,39,365	0/1:21,0:21:23.12:23,0,57	1/1:10,0:10:0.18:1,0,0	0/1:16,0:8:21.38:81,0,21	0/1:18,0:18:7.77:111,0,8	0/1:40,0:32:35.99:140,0,36	0/1:23,0:23:15.32:15,0,215	0/0:11,0:11:14.87:0,15,147	0/0:48,0:53:72.50:0,72,707	0/0:19,0:21:12.19:0,12,200	0/1:31,0:29:6.35:364,0,6	0/0:10,0:10:4.13:0,4,44	0/1:7,0:7:13.49:72,0,13
chr10	108502443	.	ACCC	A	1880.99	PASS	AB=0.711;AC=14;AF=0.250;AN=56;BaseQRankSum=3.972;DP=479;FS=29.017;HRun=12;HaplotypeScore=86.8586;InbreedingCoeff=0.5213;MQ=69.02;MQ0=3;MQRankSum=-4.010;QD=9.80;ReadPosRankSum=6.648;VQSLOD=-0.4379;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:45:571,45,0	1/1:4,1:5:2.96:38,3,0	0/0:16,0:12:17.77:0,18,242	0/0:14,0:14:25.95:0,26,355	0/0:4,0:4:5.21:0,5,67	0/0:8,0:8:15.04:0,15,226	0/0:11,0:13:33.07:0,33,561	0/1:22,1:28:14.97:15,0,106	0/0:13,0:15:21.02:0,21,322	0/0:11,0:11:14.95:0,15,170	0/0:8,0:8:6.02:0,6,91	0/0:18,0:19:39.10:0,39,633	0/0:10,0:11:21.05:0,21,339	0/0:16,0:16:30.10:0,30,520	0/0:29,0:30:75.12:0,75,1267	0/0:24,0:24:33.07:0,33,555	1/1:4,21:25:19.20:698,19,0	1/1:3,19:22:45.10:568,45,0	1/1:5,1:9:2.39:37,2,0	0/0:7,0:11:1.22:0,1,3	0/1:24,2:44:47.27:77,0,47	0/0:11,0:11:12.04:0,12,222	0/0:7,0:13:10.24:0,10,96	0/0:21,0:22:54.15:0,54,945	0/0:16,0:16:21.06:0,21,326	0/1:11,1:25:14.79:15,0,41	0/0:15,0:23:36.35:0,36,231	0/1:5,1:8:1.94:31,0,2
chr10	108502482	.	A	ATGTG	7477.61	PASS	AB=0.900;AC=21;AF=0.375;AN=56;BaseQRankSum=5.606;DP=583;FS=8.072;HRun=0;HaplotypeScore=145.1758;InbreedingCoeff=0.7780;MQ=61.99;MQ0=8;MQRankSum=-6.573;QD=25.09;ReadPosRankSum=-3.180;VQSLOD=3.7127;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:31:38.98:604,39,0	1/1:5,0:10:9.03:145,9,0	0/0:35,0:23:14.17:0,14,243	0/1:33,0:16:1.67:2,0,279	0/0:12,0:12:27.07:0,27,408	0/0:22,0:23:50.56:0,51,976	0/0:18,0:18:32.94:0,33,505	1/1:26,12:35:64.62:1237,65,0	0/0:17,0:17:45.15:0,45,743	0/0:20,0:20:36.10:0,36,548	0/0:7,0:7:9.03:0,9,149	0/0:19,0:19:54.16:0,54,859	0/0:14,0:14:33.11:0,33,541	0/0:19,0:19:57.19:0,57,939	0/0:17,0:17:39.12:0,39,613	0/0:20,0:20:51.16:0,51,817	0/1:25,0:33:21.07:750,0,21	0/1:15,0:17:12:108,0,12	1/1:12,4:14:30:505,30,0	1/1:4,3:8:17.22:317,17,0	1/1:30,15:45:62.62:1177,63,0	0/0:8,0:8:12.03:0,12,175	0/0:7,0:7:15.04:0,15,247	0/0:33,0:34:73.57:0,74,1072	0/0:14,0:14:39.13:0,39,620	1/1:16,6:23:47.27:890,47,0	1/1:10,14:25:50.77:1124,51,0	1/1:5,11:16:29.79:620,30,0
chr10	108502568	.	ATG	A	5187.31	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.944;DP=918;FS=15.454;HRun=0;HaplotypeScore=163.1280;InbreedingCoeff=0.9981;MQ=55.63;MQ0=19;MQRankSum=-1.875;QD=23.16;ReadPosRankSum=1.212;VQSLOD=4.8505;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,1:45:19.62:0,20,828	0/0:12,0:12:24.08:0,24,396	0/0:72,0:32:55.04:0,55,787	0/0:58,0:25:33.57:0,34,460	0/0:16,0:15:42.14:0,42,693	0/0:25,0:25:57.15:0,57,884	0/0:36,1:37:55.73:0,56,1353	1/1:14,26:34:63.14:755,63,0	0/0:26,0:26:59.54:0,60,916	0/0:36,2:37:96.30:0,96,1495	0/0:16,0:16:39.12:0,39,616	0/0:39,0:39:99:0,99,1556	0/0:21,0:21:57.19:0,57,934	0/0:36,0:36:93.27:0,93,1450	0/0:46,0:46:99:0,129,2081	0/0:30,2:32:46.75:0,47,1292	0/0:35,0:35:81.28:0,81,1324	0/0:22,1:23:25.57:0,26,862	1/1:9,11:15:30.09:373,30,0	1/1:2,18:18:47.62:599,48,0	1/1:13,62:75:99:1685,136,0	0/0:18,0:18:30.09:0,30,471	0/0:22,0:22:51.17:0,51,841	0/0:49,0:49:99:0,105,1676	0/0:26,0:26:63.22:0,63,1031	1/1:8,22:29:39.25:726,39,0	1/1:6,18:24:45.14:560,45,0	1/1:1,13:14:39.12:488,39,0
chr10	108505819	.	TG	T	7452	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=10.597;DP=593;FS=2.714;HRun=7;HaplotypeScore=59.2151;InbreedingCoeff=0.9942;MQ=74.66;MQ0=0;MQRankSum=-0.441;QD=25.35;ReadPosRankSum=3.585;VQSLOD=5.5631;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,36:42:84.19:857,84,0	1/1:7,7:14:21.04:214,21,0	0/0:15,0:14:36.03:0,36,375	0/0:14,0:14:21.77:0,22,244	0/0:16,0:16:38.80:0,39,476	0/0:22,0:22:66.21:0,66,827	0/0:30,0:30:72.21:0,72,882	1/1:2,17:19:48.09:483,48,0	0/0:12,0:12:30.09:0,30,365	0/0:20,0:20:60.18:0,60,744	0/0:9,0:9:24.08:0,24,302	1/1:2,23:25:66.15:673,66,0	0/0:20,0:20:54.16:0,54,666	0/0:30,0:30:84.27:0,84,1051	0/0:19,0:19:54.15:0,54,653	0/0:17,0:17:51.16:0,51,641	1/1:1,38:39:99:1133,111,0	1/1:1,31:32:87.20:888,87,0	1/1:3,21:24:63.10:633,63,0	1/1:1,14:15:42.09:428,42,0	1/1:2,33:35:90.20:918,90,0	0/0:17,0:17:48.14:0,48,591	0/0:13,0:13:36.09:0,36,427	0/0:28,0:28:78.25:0,78,981	0/0:17,0:17:42.13:0,42,528	1/1:3,15:18:45.10:459,45,0	1/1:3,22:25:63.14:643,63,0	1/1:0,6:6:12.03:122,12,0
chr10	108507623	.	TAG	T	4246.84	PASS	AB=0.528;AC=13;AF=0.232;AN=56;BaseQRankSum=10.612;DP=529;FS=0.402;HRun=0;HaplotypeScore=66.3119;InbreedingCoeff=0.9009;MQ=84.53;MQ0=0;MQRankSum=-4.012;QD=32.17;ReadPosRankSum=2.007;VQSLOD=6.8605;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1949	0/0:7,0:7:21.07:0,21,367	0/0:22,0:22:50.66:0,51,832	0/0:24,0:22:48.15:0,48,784	0/0:11,0:11:33.11:0,33,578	0/0:17,0:17:51.13:0,51,854	0/0:27,0:27:75.26:0,75,1294	1/1:3,20:23:60.15:745,60,0	0/0:16,0:16:45.13:0,45,753	0/0:19,0:19:54.18:0,54,923	0/0:14,0:14:42.14:0,42,703	0/0:20,0:20:57.19:0,57,976	0/0:17,0:17:51.15:0,51,831	0/0:16,0:16:45.14:0,45,760	0/0:15,0:15:42.12:0,42,693	0/0:13,0:13:36.11:0,36,599	0/0:26,0:26:72.23:0,72,1218	0/0:19,0:19:51.17:0,51,894	1/1:1,16:17:45.13:592,45,0	1/1:0,8:8:15.05:203,15,0	1/1:0,21:21:51.17:690,51,0	0/0:11,0:11:33.11:0,33,576	0/0:12,0:12:36.12:0,36,588	0/0:41,0:41:99:0,111,1939	0/0:10,0:10:30.10:0,30,517	1/1:3,24:27:22.63:921,23,0	1/1:1,16:17:48.16:649,48,0	0/1:2,17:19:12.32:447,0,12
chr10	108508249	.	AGACCGTGAACCTGT	A	8970.75	PASS	AB=0.526;AC=13;AF=0.232;AN=56;BaseQRankSum=13.928;DP=627;FS=2.648;HRun=0;HaplotypeScore=246.1532;InbreedingCoeff=0.8972;MQ=89.36;MQ0=0;MQRankSum=-10.257;QD=75.38;ReadPosRankSum=1.267;VQSLOD=4.1758;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,160,10039	0/0:15,0:15:45.15:0,45,2919	0/0:30,0:30:78.27:0,78,4566	0/0:19,0:19:41.61:0,42,2341	0/0:25,0:25:66.21:0,66,4412	0/0:15,0:15:45.15:0,45,2994	0/0:27,0:27:78.27:0,78,4720	1/1:5,9:14:27.01:415,27,0	0/0:26,0:26:78.27:0,78,5323	0/0:21,0:21:63.22:0,63,4226	0/0:16,0:16:48.16:0,48,3341	0/0:32,0:32:93.32:0,93,6032	0/0:18,0:18:54.19:0,54,3343	0/0:26,0:26:75.26:0,75,5036	0/0:28,0:28:72.25:0,72,4792	0/0:25,0:25:69.24:0,69,4473	0/0:30,0:30:78.27:0,78,5321	0/0:10,0:10:30.10:0,30,1591	1/1:5,9:14:27.09:1069,27,0	1/1:2,22:24:51.18:2138,51,0	1/1:5,15:20:24.08:970,24,0	0/0:16,0:16:48.16:0,48,3346	0/0:13,0:13:33.11:0,33,2286	0/0:40,0:40:99:0,120,7961	0/0:20,0:20:54.19:0,54,3431	0/1:2,18:20:99:1862,0,159	1/1:3,15:19:42.62:1762,43,0	1/1:0,8:8:18.06:755,18,0
chr10	108509595	.	TCCTGCACAGAGTGTGGGCCGCCCGTTC	T	3640.29	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.711;DP=690;FS=1.607;HRun=0;HaplotypeScore=431.1205;InbreedingCoeff=0.9707;MQ=83.25;MQ0=0;MQRankSum=-6.008;QD=46.08;ReadPosRankSum=1.930;VQSLOD=0.9315;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,29:35:15.05:956,15,0	0/0:11,0:11:24.08:0,24,1863	0/0:20,0:20:27.39:0,27,1673	0/0:27,0:27:45.93:0,46,2090	0/0:9,0:9:27.09:0,27,2246	0/0:19,0:19:54.17:0,54,4173	0/0:30,0:30:87.28:0,87,5689	0/0:27,0:27:60.21:0,60,3416	0/0:33,0:33:81.28:0,81,7294	0/0:23,0:23:60.20:0,60,4782	0/0:11,0:11:33.11:0,33,2184	0/0:45,0:45:99:0,123,11301	0/0:25,0:25:66.19:0,66,5123	0/0:27,0:27:63.22:0,63,5295	0/0:30,0:30:81.25:0,81,6107	0/0:30,0:30:78.27:0,78,7123	1/1:25,0:25:48.16:2223,48,0	1/1:3,16:19:9.03:462,9,0	0/0:18,0:18:45.15:0,45,2145	0/0:15,0:15:42.14:0,42,2967	0/0:90,0:90:99:0,256,21089	0/0:14,0:14:42.14:0,42,3347	0/0:13,0:13:30.10:0,30,1779	0/0:35,0:35:96.33:0,96,8383	0/0:13,0:13:30.10:0,30,2404	0/0:21,0:21:60.20:0,60,4567	0/0:16,0:16:39.13:0,39,3516	0/0:9,0:9:27.09:0,27,2390
chr10	108509613	.	C	CT	768.59	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.312;DP=667;FS=1.616;HRun=0;HaplotypeScore=79.0435;InbreedingCoeff=0.8825;MQ=79.73;MQ0=0;MQRankSum=-5.267;QD=12.20;ReadPosRankSum=1.256;VQSLOD=4.4463;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:14.54:189,15,0	0/0:9,0:9:24.08:0,24,336	0/0:20,0:20:22.93:0,23,580	0/0:24,1:24:4.11:0,4,651	0/0:12,0:12:36.12:0,36,503	0/0:23,0:23:69.23:0,69,955	0/0:32,0:32:96.32:0,96,1336	0/0:22,0:22:66.22:0,66,923	0/0:27,0:27:78.26:0,78,1090	0/0:21,0:21:63.21:0,63,868	0/0:11,0:11:30.10:0,30,417	0/0:46,0:46:99:0,138,1888	0/0:25,0:25:72.21:0,72,969	0/0:24,0:24:72.24:0,72,1006	0/0:31,0:31:90.30:0,90,1253	0/0:28,0:28:84.26:0,84,1142	1/1:0,17:17:42.14:660,42,0	1/1:16,1:17:3.76:49,4,0	0/0:22,0:22:55.32:0,55,800	0/0:16,0:16:45.14:0,45,611	0/0:95,0:94:99:0,274,3790	0/0:11,0:11:30.10:0,30,418	0/0:9,0:9:24.08:0,24,324	0/0:34,0:34:99:0,99,1366	0/0:11,0:11:30.08:0,30,401	0/0:20,0:20:60.20:0,60,838	0/0:17,0:17:51.15:0,51,690	0/0:13,0:13:33.08:0,33,440
chr10	108509621	.	TC	T	180.80	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=5.658;DP=667;FS=1.172;HRun=3;HaplotypeScore=81.9036;InbreedingCoeff=0.8635;MQ=73.68;MQ0=0;MQRankSum=-5.621;QD=2.87;ReadPosRankSum=1.841;VQSLOD=0.0110;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:11.39:104,11,0	0/0:9,0:9:27.07:0,27,368	0/0:19,0:18:46.91:0,47,591	0/0:21,0:20:50.96:0,51,633	0/0:11,0:11:30.10:0,30,431	0/0:21,0:21:57.19:0,57,821	0/0:32,0:32:93.30:0,93,1320	0/0:16,0:16:45.15:0,45,648	0/0:33,0:33:96.32:0,96,1379	0/0:20,0:20:57.19:0,57,806	0/0:8,0:8:21.06:0,21,285	0/0:46,0:46:99:0,138,1958	0/0:26,0:26:72.24:0,72,1035	0/0:24,0:24:72.24:0,72,1036	0/0:29,0:29:84.26:0,84,1174	0/0:26,0:26:78.26:0,78,1123	1/1:6,11:17:15.04:172,15,0	0/1:17,0:17:0.92:27,0,1	0/0:22,0:22:63.21:0,63,896	0/0:15,0:15:45.10:0,45,606	0/0:101,0:100:99:0,289,4007	0/0:13,0:13:39.11:0,39,535	0/0:12,0:12:36.11:0,36,500	0/0:36,0:36:99:0,105,1494	0/0:11,0:11:33.10:0,33,459	0/0:23,0:23:63.21:0,63,906	0/0:18,0:18:54.18:0,54,776	0/0:12,0:12:36.12:0,36,516
chr10	108510860	.	TG	T	2387.91	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.162;DP=647;FS=2.477;HRun=8;HaplotypeScore=68.3610;InbreedingCoeff=0.9909;MQ=83.80;MQ0=0;MQRankSum=-5.087;QD=23.18;ReadPosRankSum=2.373;VQSLOD=4.5122;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,38:41:99:1043,108,0	1/1:1,12:13:30.05:289,30,0	0/0:22,0:22:39.68:0,40,426	0/0:17,0:17:36.10:0,36,421	0/0:15,0:15:36.08:0,36,405	0/0:17,0:17:45.14:0,45,542	0/0:33,0:34:90.14:0,90,1064	0/0:24,0:24:57.11:0,57,666	0/0:20,1:22:28.20:0,28,602	0/0:21,0:21:48.15:0,48,579	0/0:14,1:15:13.15:0,13,431	0/0:19,0:19:33.09:0,33,389	0/0:30,0:30:84.24:0,84,992	0/0:26,0:26:75.20:0,75,872	0/0:28,0:28:78.23:0,78,927	0/0:32,0:32:93.28:0,93,1113	1/1:1,22:23:63.10:608,63,0	1/1:1,25:26:63.10:608,63,0	0/0:16,0:16:45.14:0,45,543	0/0:16,0:16:42.12:0,42,496	0/0:36,0:36:90.67:0,91,1038	0/0:16,1:17:19.16:0,19,504	0/0:19,0:19:54.15:0,54,632	0/0:24,0:24:72.22:0,72,870	0/0:22,1:23:31.21:0,31,660	0/0:22,0:22:54.17:0,54,651	0/0:27,0:27:66.19:0,66,785	0/0:22,0:22:63.17:0,63,738
chr10	108510877	.	T	TA	493.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.376;DP=653;FS=0.976;HRun=2;HaplotypeScore=77.4399;InbreedingCoeff=0.9987;MQ=90.18;MQ0=0;MQRankSum=-3.415;QD=27.39;ReadPosRankSum=-1.218;VQSLOD=3.0371;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1295	0/0:11,0:11:27.04:0,27,314	0/0:30,0:30:73.92:0,74,890	0/0:22,0:22:54.48:0,54,647	0/0:18,0:18:51.13:0,51,606	0/0:17,0:17:51.14:0,51,619	0/0:24,0:24:72.20:0,72,867	0/0:19,0:19:54.17:0,54,670	0/0:22,0:22:66.17:0,66,791	0/0:21,0:21:60.18:0,60,734	0/0:14,0:14:42.12:0,42,504	1/1:0,18:18:42.14:588,42,0	0/0:29,0:29:87.26:0,87,1064	0/0:34,0:34:99:0,99,1189	0/0:29,0:29:87.25:0,87,1054	0/0:35,0:35:99:0,102,1253	0/0:20,0:20:57.16:0,57,693	0/0:25,0:25:72.21:0,72,879	0/0:22,0:22:60.18:0,60,732	0/0:18,0:18:48.15:0,48,595	0/0:39,0:39:99:0,111,1359	0/0:13,0:13:36.09:0,36,422	0/0:22,0:22:57.16:0,57,690	0/0:27,0:27:69.16:0,69,824	0/0:24,0:24:63.20:0,63,780	0/0:25,0:25:75.24:0,75,928	0/0:23,0:23:66.21:0,66,816	0/0:15,0:15:45.08:0,45,515
chr10	108511051	.	T	TGGAGGCA	16145.09	PASS	AB=0.636;AC=23;AF=0.411;AN=56;BaseQRankSum=-5.752;DP=694;FS=0.000;HRun=0;HaplotypeScore=152.5323;InbreedingCoeff=0.9209;MQ=87.42;MQ0=0;MQRankSum=-15.185;QD=58.71;ReadPosRankSum=-1.529;VQSLOD=4.3712;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,13:26:30.10:1050,30,0	1/1:3,8:11:24.08:904,24,0	0/0:29,0:29:54.18:0,54,1222	0/0:27,0:27:50.85:0,51,1114	0/0:21,0:21:36.12:0,36,881	0/0:24,0:24:54.15:0,54,1082	0/0:34,0:34:84.20:0,84,1761	1/1:17,12:33:37.51:1622,38,0	0/0:32,0:32:90.29:0,90,2131	0/0:32,0:32:72.24:0,72,1717	0/0:14,0:14:30.04:0,30,540	1/1:10,22:33:13.69:2946,14,0	0/0:30,0:30:87.25:0,87,1921	0/0:27,0:27:72.24:0,72,1693	0/0:34,0:34:99:0,99,2403	0/0:35,0:35:90.31:0,90,2174	1/1:7,8:16:24.08:914,24,0	1/1:14,12:27:57.19:2066,57,0	1/1:13,7:21:36.12:1210,36,0	1/1:8,8:17:18.06:690,18,0	1/1:20,16:36:39.13:1382,39,0	0/0:24,0:24:54.18:0,54,1256	0/0:17,0:17:42.14:0,42,967	0/0:25,0:25:63.21:0,63,1472	0/0:14,0:14:42.14:0,42,1030	0/1:9,11:21:22.42:1524,0,22	1/1:10,10:22:26.75:1030,27,0	1/1:3,7:10:21.07:806,21,0
chr10	108511093	.	G	GA	913.86	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.219;DP=635;FS=4.806;HRun=6;HaplotypeScore=97.3532;InbreedingCoeff=0.9800;MQ=82.65;MQ0=0;MQRankSum=-3.747;QD=26.88;ReadPosRankSum=0.279;VQSLOD=3.6481;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:57.12:0,57,581	0/0:9,0:9:15.03:0,15,153	0/0:22,0:21:44.99:0,45,446	0/0:19,0:19:42.05:0,42,412	0/0:18,0:18:42.09:0,42,428	0/0:20,0:21:53.15:0,53,526	0/0:35,0:35:93.21:0,93,949	0/0:28,0:28:78.16:0,78,790	0/0:31,0:31:90.19:0,90,911	0/0:24,0:24:60.13:0,60,612	0/0:8,0:8:21.05:0,21,213	1/1:6,28:34:56.63:1009,57,0	0/0:29,0:29:84.19:0,84,856	0/0:28,0:28:78.16:0,78,788	0/0:31,0:31:87.20:0,87,888	0/0:31,0:31:84.19:0,84,857	0/0:23,0:22:57.10:0,57,572	0/0:22,0:22:54.12:0,54,551	0/0:27,0:27:72.14:0,72,726	0/0:15,0:15:39.09:0,39,398	0/0:29,0:29:42.07:0,42,428	0/0:16,0:16:42.09:0,42,428	0/0:11,0:11:33.08:0,33,337	0/0:26,0:26:72.16:0,72,735	0/0:16,0:16:48.10:0,48,483	0/0:22,0:22:57.05:0,57,559	0/0:20,0:19:42.07:0,42,420	0/0:13,0:13:39.09:0,39,398
chr10	108511666	.	GC	G	5031.74	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.573;DP=631;FS=14.798;HRun=1;HaplotypeScore=71.1017;InbreedingCoeff=0.9993;MQ=79.22;MQ0=0;MQRankSum=-2.689;QD=39.01;ReadPosRankSum=2.729;VQSLOD=4.0485;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:90.30:1258,90,0	1/1:1,9:10:30.10:417,30,0	0/0:14,0:14:29.93:0,30,482	0/0:17,0:17:51.16:0,51,772	0/0:11,0:11:33.10:0,33,505	0/0:18,0:18:54.18:0,54,860	0/0:36,0:36:99:0,108,1676	0/0:23,0:23:69.24:0,69,1100	0/0:25,0:25:75.23:0,75,1172	0/0:22,0:22:66.22:0,66,1041	0/0:10,0:10:30.10:0,30,477	0/0:39,0:39:99:0,117,1870	0/0:24,0:24:72.25:0,72,1145	0/0:28,0:28:84.29:0,84,1343	0/0:29,0:29:84.29:0,84,1339	0/0:17,0:17:51.17:0,51,813	1/1:0,50:50:99:1930,138,0	1/1:1,36:36:99:1427,102,0	0/0:19,0:19:54.12:0,54,811	0/0:15,0:15:45.13:0,45,671	0/0:29,0:29:87.28:0,87,1365	0/0:20,0:20:60.19:0,60,918	0/0:12,0:12:36.12:0,36,575	0/0:28,0:28:84.27:0,84,1314	0/0:16,0:16:48.16:0,48,765	0/0:20,0:20:60.20:0,60,958	0/0:20,0:20:60.19:0,60,931	0/0:10,0:10:30.10:0,30,473
chr10	108511773	.	TA	T	953.67	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.697;DP=587;FS=1.617;HRun=1;HaplotypeScore=58.3246;InbreedingCoeff=0.9919;MQ=76.58;MQ0=0;MQRankSum=-2.719;QD=31.79;ReadPosRankSum=0.318;VQSLOD=3.2706;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.29:0,84,1342	0/0:7,0:7:21.07:0,21,335	0/0:10,0:10:29.94:0,30,404	0/0:16,0:16:45.15:0,45,703	0/0:12,0:12:33.58:0,34,528	0/0:23,0:23:69.24:0,69,1095	0/0:30,0:30:90.31:0,90,1433	0/0:28,0:28:81.23:0,81,1228	0/0:21,0:21:63.21:0,63,1007	0/0:17,0:17:51.17:0,51,795	0/0:10,0:10:30.08:0,30,430	1/1:0,30:30:75.21:1049,75,0	0/0:26,0:26:75.23:0,75,1171	0/0:27,0:27:78.22:0,78,1217	0/0:23,0:23:69.24:0,69,1103	0/0:17,0:17:51.16:0,51,792	0/0:33,0:33:99:0,99,1558	0/0:30,0:30:90.31:0,90,1438	0/0:16,0:16:48.16:0,48,767	0/0:15,0:15:42.13:0,42,648	0/0:45,0:45:99:0,135,2157	0/0:11,0:11:33.11:0,33,524	0/0:13,0:13:39.12:0,39,600	0/0:22,0:22:63.17:0,63,978	0/0:10,0:10:30.09:0,30,458	0/0:30,0:30:90.29:0,90,1416	0/0:28,0:28:84.27:0,84,1316	0/0:8,0:8:24.08:0,24,383
chr10	108512958	.	CAA	C	10230.53	PASS	AB=0.563;AC=23;AF=0.411;AN=56;BaseQRankSum=17.805;DP=545;FS=4.872;HRun=3;HaplotypeScore=98.1807;InbreedingCoeff=0.9249;MQ=82.93;MQ0=0;MQRankSum=-3.730;QD=40.76;ReadPosRankSum=1.025;VQSLOD=4.2295;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:96.33:1461,96,0	1/1:0,10:10:26.99:406,27,0	0/0:18,0:18:51.17:0,51,961	0/0:21,0:21:60.18:0,60,1075	0/0:16,0:16:48.16:0,48,926	0/0:29,0:29:87.26:0,87,1636	0/0:32,0:32:93.32:0,93,1775	1/1:1,22:23:63.18:920,63,0	0/0:19,0:19:57.20:0,57,1101	0/0:20,0:20:60.21:0,60,1154	0/0:11,0:11:30.10:0,30,570	1/1:0,26:26:75.25:1145,75,0	0/0:13,0:13:39.13:0,39,750	0/0:23,0:23:69.24:0,69,1333	0/0:11,0:11:33.10:0,33,606	0/0:21,0:21:63.22:0,63,1211	1/1:0,20:20:60.20:918,60,0	1/1:1,28:29:81.28:1240,81,0	1/1:2,8:10:24.07:347,24,0	1/1:1,18:19:48.16:726,48,0	1/1:1,28:29:72.24:1094,72,0	0/0:14,0:14:42.14:0,42,810	0/0:9,0:9:27.08:0,27,489	0/0:19,0:19:57.18:0,57,1063	0/0:18,0:18:54.19:0,54,1022	0/1:4,14:18:67.81:595,0,68	1/1:0,24:24:69.23:1056,69,0	1/1:0,7:7:21.07:322,21,0
chr10	108516304	.	TCCC	T	4318.76	PASS	AB=0.783;AC=24;AF=0.429;AN=56;BaseQRankSum=-0.602;DP=348;FS=30.889;HRun=12;HaplotypeScore=71.8749;InbreedingCoeff=0.6964;MQ=64.88;MQ0=1;MQRankSum=-0.383;QD=21.38;ReadPosRankSum=5.220;VQSLOD=1.3013;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,21:27:45.49:632,45,0	1/1:1,3:4:11.99:126,12,0	0/0:7,0:7:9.03:0,9,148	0/0:7,0:5:4.59:0,5,90	0/0:3,0:5:3.81:0,4,29	0/1:16,1:18:10.99:11,0,195	0/0:24,0:31:62.70:0,63,630	1/1:7,11:18:9.68:275,10,0	0/0:11,0:11:30.03:0,30,315	0/0:8,0:8:5.51:0,6,33	0/0:5,0:5:0:0,0,0	1/1:3,15:18:36.09:442,36,0	0/0:11,0:13:29.99:0,30,310	0/0:10,0:10:20.93:0,21,203	0/0:7,0:8:21:0,21,234	0/0:3,0:7:17.50:0,17,192	1/1:3,22:25:54.16:682,54,0	1/1:1,11:12:30.07:379,30,0	0/1:8,8:16:26.32:290,0,26	1/1:0,4:5:14.98:169,15,0	1/1:3,23:26:30.07:379,30,0	0/0:2,0:5:0:0,0,0	0/0:2,0:7:2.30:0,2,21	0/0:13,0:16:27.47:0,27,269	0/0:3,0:4:8.96:0,9,68	1/1:2,13:15:39.10:479,39,0	1/1:2,10:12:23.61:303,24,0	1/1:2,4:6:12.03:151,12,0
chr10	108517154	.	CA	C	5362.25	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.489;DP=561;FS=4.376;HRun=1;HaplotypeScore=62.2269;InbreedingCoeff=0.9891;MQ=79.78;MQ0=0;MQRankSum=-2.482;QD=37.50;ReadPosRankSum=2.902;VQSLOD=5.5101;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:40:99:1552,111,0	1/1:1,8:9:21.07:293,21,0	0/0:14,0:14:37.22:0,37,489	0/0:16,0:16:21.62:0,22,443	0/0:9,0:9:24.08:0,24,381	0/0:22,0:22:66.23:0,66,1052	0/0:31,0:31:93.32:0,93,1485	0/0:22,0:22:57.19:0,57,911	0/0:20,0:20:60.20:0,60,957	0/0:18,0:18:54.18:0,54,850	0/0:5,0:5:15.05:0,15,238	1/1:0,27:27:72.24:1006,72,0	0/0:12,0:12:36.12:0,36,570	0/0:23,0:23:69.24:0,69,1103	0/0:17,0:17:51.17:0,51,815	0/0:14,0:14:42.13:0,42,647	1/1:0,47:47:99:1756,126,0	1/1:0,20:20:54.18:755,54,0	0/0:22,0:22:66.22:0,66,1030	0/0:7,0:7:21.07:0,21,335	0/0:50,0:50:99:0,151,2371	0/0:5,0:5:15.04:0,15,217	0/0:9,0:9:27.06:0,27,383	0/0:27,0:27:81.28:0,81,1289	0/0:16,0:16:48.16:0,48,760	0/0:25,0:25:75.24:0,75,1176	0/0:24,0:24:72.25:0,72,1151	0/0:10,0:10:30.10:0,30,479
chr10	108519068	.	TCCC	T	2052.50	PASS	AB=0.821;AC=12;AF=0.214;AN=56;BaseQRankSum=9.100;DP=598;FS=0.480;HRun=5;HaplotypeScore=136.2946;InbreedingCoeff=-0.2726;MQ=55.05;MQ0=4;MQRankSum=-7.676;QD=8.70;ReadPosRankSum=-1.619;VQSLOD=-0.6802;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,5:28:99:203,0,870	0/1:12,2:14:85.16:85,0,565	0/0:23,0:16:45.08:0,45,863	0/0:38,0:27:52.50:0,52,1241	0/0:21,0:21:60.21:0,60,1319	0/0:21,0:21:57.20:0,57,1296	0/0:31,0:31:87.28:0,87,1904	0/1:29,1:30:21.13:21,0,1282	0/0:15,0:15:45.15:0,45,924	0/0:18,0:18:54.17:0,54,1125	0/0:8,0:8:24.08:0,24,517	0/1:17,2:19:99:166,0,801	0/0:26,0:26:78.25:0,78,1642	0/0:15,0:15:45.11:0,45,953	0/0:27,0:27:81.22:0,81,1680	0/0:36,0:36:99:0,102,2228	0/1:7,2:9:99:130,0,245	0/1:7,1:8:99:130,0,148	0/1:12,7:18:99:216,0,572	0/1:14,8:22:99:475,0,530	0/1:21,11:29:99:128,0,761	0/0:19,0:19:57.20:0,57,1270	0/0:14,0:14:42.14:0,42,968	0/0:26,0:26:78.27:0,78,1742	0/0:24,0:24:61:0,61,1425	0/1:22,6:28:99:367,0,1033	0/1:11,5:15:99:201,0,670	0/1:8,3:11:81.02:81,0,449
chr10	108519236	.	C	CTCCTCCTCTCCCTAT	2947.62	PASS	AB=0.867;AC=11;AF=0.196;AN=56;BaseQRankSum=2.234;DP=662;FS=12.455;HRun=0;HaplotypeScore=244.8696;InbreedingCoeff=0.6219;MQ=54.32;MQ0=8;MQRankSum=-7.820;QD=17.24;ReadPosRankSum=-1.170;VQSLOD=0.8314;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,25:45:24.04:1161,24,0	1/1:5,0:5:2.60:10,3,0	0/0:24,0:8:17.85:0,18,487	0/0:30,0:10:14.97:0,15,429	0/0:22,0:22:60.19:0,60,2018	0/0:18,0:18:48.14:0,48,1537	0/0:33,0:33:75.19:0,75,2396	0/0:27,0:26:36.10:0,36,1150	0/0:31,0:31:56.46:0,56,2169	0/0:30,0:30:78.24:0,78,2790	0/0:17,0:17:48.15:0,48,1684	1/1:6,10:21:11.98:462,12,0	0/0:23,0:23:66.23:0,66,2238	0/0:18,0:18:48.16:0,48,1846	0/0:29,0:29:64.45:0,64,2019	0/0:27,0:27:81.26:0,81,3125	1/1:15,0:19:23.58:921,24,0	0/1:11,11:26:5.72:471,0,6	0/1:24,0:23:58.46:58,0,1166	0/0:7,0:7:12.03:0,12,415	0/0:42,0:41:96.30:0,96,3661	0/0:17,0:17:48.16:0,48,1680	0/0:19,0:19:48.16:0,48,1583	0/0:31,0:31:81.27:0,81,2446	0/0:16,0:16:42.14:0,42,1544	0/1:28,0:28:25.17:25,0,1893	0/0:14,0:14:36.12:0,36,1269	0/0:16,0:15:30.08:0,30,878
chr10	108519291	.	TC	T	2799.33	PASS	AB=0.745;AC=15;AF=0.268;AN=56;BaseQRankSum=10.858;DP=658;FS=11.980;HRun=6;HaplotypeScore=85.8051;InbreedingCoeff=0.7244;MQ=60.03;MQ0=5;MQRankSum=-0.290;QD=17.50;ReadPosRankSum=-0.561;VQSLOD=2.2027;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,1:48:66.91:0,67,1179	0/1:11,4:15:79.25:79,0,280	0/0:33,0:24:56.20:0,56,682	0/0:40,1:21:18.13:0,18,515	0/0:14,0:14:39.13:0,39,512	0/0:22,0:22:66.21:0,66,868	0/0:34,0:34:96.29:0,96,1242	1/1:7,17:21:45.11:482,45,0	0/0:37,1:37:59.84:0,60,1148	0/0:19,0:19:54.18:0,54,709	0/0:10,0:10:24.07:0,24,302	0/0:26,1:27:33.97:0,34,767	0/0:20,0:20:54.14:0,54,667	0/0:25,1:26:75.23:0,75,969	0/0:34,0:34:99:0,99,1271	0/0:25,0:25:69.20:0,69,877	0/1:25,4:29:47.73:48,0,804	0/0:24,0:23:54.13:0,54,691	1/1:1,15:16:41.22:478,41,0	1/1:0,10:10:30.08:322,30,0	1/1:1,22:22:57.14:612,57,0	0/0:18,0:18:51.14:0,51,634	0/0:19,0:18:51.17:0,51,668	0/0:32,0:32:93.12:0,93,1133	0/0:13,0:13:36.12:0,36,471	0/1:5,16:19:27.82:425,0,28	1/1:0,8:8:21.05:226,21,0	1/1:1,13:14:30.08:322,30,0
chr10	108520164	.	C	CT	3078.09	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=5.002;DP=452;FS=1.501;HRun=9;HaplotypeScore=63.4287;InbreedingCoeff=0.9428;MQ=61.89;MQ0=1;MQRankSum=-2.124;QD=22.47;ReadPosRankSum=-3.058;VQSLOD=3.3382;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:35.51:0,36,110	0/0:10,0:10:18.05:0,18,57	0/0:7,0:5:11.96:0,12,95	0/0:6,0:4:5.96:0,6,46	0/0:21,0:21:53.96:0,54,464	0/0:26,0:26:65.98:0,66,573	0/0:10,0:10:23.98:0,24,205	1/1:6,28:34:77.97:889,78,0	0/0:15,0:15:29.99:0,30,260	0/0:14,0:14:32.98:0,33,286	0/0:13,0:13:29.98:0,30,260	0/0:9,0:9:11.10:0,11,36	0/0:15,0:15:20.97:0,21,178	0/0:16,0:16:35.98:0,36,310	0/0:13,0:13:26.99:0,27,234	0/0:11,0:12:26.01:0,26,212	0/0:23,0:22:32.73:0,33,115	0/0:29,0:27:44.39:0,44,141	1/1:12,12:23:51:502,51,0	1/1:4,14:18:34.15:312,34,0	1/1:3,3:6:8.98:86,9,0	0/0:8,0:8:17.97:0,18,151	0/0:6,0:6:8.99:0,9,78	0/0:15,0:15:38.95:0,39,327	0/0:23,0:23:53.97:0,54,466	1/1:1,21:22:60.06:624,60,0	1/1:4,10:14:30.08:331,30,0	1/1:3,16:19:48.13:529,48,0
chr10	108520173	.	TA	T	3700.11	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=12.281;DP=409;FS=2.453;HRun=4;HaplotypeScore=54.8588;InbreedingCoeff=0.9431;MQ=61.26;MQ0=4;MQRankSum=-3.389;QD=17.05;ReadPosRankSum=1.896;VQSLOD=2.9566;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:51.14:596,51,0	1/1:0,10:10:27.08:319,27,0	0/0:8,0:4:9.01:0,9,104	0/0:7,0:5:6.02:0,6,80	0/0:21,0:21:60.13:0,60,734	0/0:25,0:25:72.22:0,72,931	0/0:8,0:8:21.07:0,21,280	1/1:34,0:32:68.63:362,69,0	0/0:10,0:10:30.10:0,30,399	0/0:14,0:14:39.11:0,39,491	0/0:13,0:13:36.09:0,36,449	1/1:0,5:5:15.05:178,15,0	0/0:8,0:8:21.06:0,21,266	0/0:13,0:13:33.11:0,33,440	0/0:10,0:10:30.09:0,30,386	0/0:11,0:11:27.55:0,28,345	1/1:3,20:22:42.13:501,42,0	1/1:0,29:27:66.11:752,66,0	1/1:20,0:19:37.13:200,37,0	1/1:19,0:19:30.30:157,30,0	1/1:4,0:4:4.22:18,4,0	0/0:6,0:6:15.04:0,15,186	0/0:3,0:3:9.03:0,9,120	0/0:14,0:14:30.10:0,30,398	0/0:20,0:20:60.15:0,60,754	1/1:25,0:25:50.85:279,51,0	1/1:10,0:10:26.84:113,27,0	1/1:19,0:19:48.31:225,48,0
chr10	108521509	.	TG	T	1190.77	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.909;DP=577;FS=3.402;HRun=3;HaplotypeScore=83.6948;InbreedingCoeff=0.9248;MQ=72.32;MQ0=0;MQRankSum=0.042;QD=33.08;ReadPosRankSum=1.281;VQSLOD=4.0839;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1891	0/0:6,0:6:18.06:0,18,287	0/0:7,0:8:17.99:0,18,232	0/0:9,0:9:17.95:0,18,206	0/0:10,0:10:27.09:0,27,431	0/0:7,0:7:21.07:0,21,336	0/0:36,0:36:99:0,108,1718	0/0:19,0:19:57.18:0,57,890	0/0:21,0:21:63.21:0,63,1007	0/0:14,0:14:39.13:0,39,623	0/0:9,0:9:27.09:0,27,431	1/1:1,35:36:93.30:1286,93,0	0/0:27,0:27:81.23:0,81,1263	0/0:21,0:21:63.21:0,63,1006	0/0:26,0:25:78.27:0,78,1247	0/0:22,0:21:66.22:0,66,1042	0/0:51,0:51:99:0,154,2408	0/0:25,0:25:72.25:0,72,1142	0/0:22,0:22:66.20:0,66,1028	0/0:7,0:7:21.07:0,21,336	0/0:56,0:56:99:0,169,2633	0/0:4,0:4:12.04:0,12,192	0/0:5,0:5:15.05:0,15,238	0/0:31,0:31:93.32:0,93,1481	0/0:18,0:18:54.18:0,54,863	0/0:11,0:11:33.11:0,33,524	0/0:21,0:21:63.19:0,63,981	0/0:15,0:15:45.15:0,45,714
chr10	108526124	.	C	CCTGCTGCTGCTGCTGCTGCTG	11515.14	PASS	AB=1.000;AC=23;AF=0.426;AN=54;BaseQRankSum=5.153;DP=606;FS=0.504;HRun=0;HaplotypeScore=310.6290;InbreedingCoeff=0.8422;MQ=68.34;MQ0=0;MQRankSum=-9.433;QD=41.13;ReadPosRankSum=-4.342;VQSLOD=2.6914;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:3.94:26,4,0	1/1:6,0:6:6.02:315,6,0	0/1:21,0:19:6.65:7,0,906	0/0:21,0:20:36.10:0,36,1031	0/0:15,0:15:12.02:0,12,400	0/0:25,0:25:51.15:0,51,1526	0/0:31,0:31:69.21:0,69,2769	1/1:17,0:16:12.04:643,12,0	0/0:20,0:20:42.12:0,42,1911	0/0:17,0:17:24.08:0,24,968	0/0:12,0:12:3.72:0,4,45	1/1:32,0:32:36.03:1777,36,0	0/0:30,0:30:58.09:0,58,3022	0/0:25,0:25:51.16:0,51,2342	0/0:25,0:25:48.16:0,48,2339	0/0:28,0:28:63.22:0,63,3122	1/1:25,7:32:33.11:2688,33,0	1/1:18,2:25:30.10:2473,30,0	1/1:17,0:15:14.45:315,14,0	./.	1/1:45,0:40:12.76:124,13,0	0/0:8,0:8:9.02:0,9,170	0/0:8,0:8:12.01:0,12,235	0/0:35,0:35:81.26:0,81,3646	0/0:18,0:18:15.02:0,15,256	1/1:14,0:13:14.25:318,14,0	1/1:25,0:29:21.07:1852,21,0	1/1:14,0:14:18.03:977,18,0
chr10	108526348	.	AG	A	5643.47	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.624;DP=580;FS=0.770;HRun=2;HaplotypeScore=55.2404;InbreedingCoeff=0.9695;MQ=60.41;MQ0=0;MQRankSum=-2.208;QD=35.49;ReadPosRankSum=0.926;VQSLOD=5.0759;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:87.25:0,87,1241	0/0:8,0:8:24.08:0,24,360	0/0:13,0:12:24.08:0,24,360	0/0:15,0:13:30.10:0,30,437	0/0:20,0:20:57.19:0,57,854	0/0:21,0:21:63.20:0,63,924	0/0:22,0:22:66.20:0,66,946	1/1:0,19:19:57.19:740,57,0	0/0:28,0:28:84.28:0,84,1259	0/0:20,0:20:57.18:0,57,818	0/0:8,0:8:21.07:0,21,315	1/1:0,25:25:69.22:895,69,0	0/0:22,0:22:66.22:0,66,989	0/0:25,0:25:72.24:0,72,1079	0/0:23,0:23:69.22:0,69,1015	0/0:33,0:33:99:0,99,1445	0/0:32,0:32:96.32:0,96,1435	0/0:18,0:18:54.18:0,54,809	1/1:1,20:20:60.17:745,60,0	1/1:1,11:12:33.11:426,33,0	1/1:0,36:36:93.30:1208,93,0	0/0:16,0:16:48.14:0,48,681	0/0:13,0:13:33.11:0,33,493	0/0:37,0:37:99:0,108,1617	0/0:13,0:13:36.12:0,36,540	1/1:1,15:16:3.17:540,3,0	1/1:0,21:21:57.19:740,57,0	1/1:0,9:9:27.09:350,27,0
chr10	108530389	.	TGGCCGGCG	T	15412.35	PASS	AB=0.509;AC=23;AF=0.411;AN=56;BaseQRankSum=16.629;DP=619;FS=15.333;HRun=0;HaplotypeScore=165.8635;InbreedingCoeff=0.9249;MQ=70.77;MQ0=0;MQRankSum=-16.773;QD=55.24;ReadPosRankSum=0.579;VQSLOD=3.8573;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,33:37:69.24:1863,69,0	1/1:2,10:12:24.08:689,24,0	0/0:16,0:16:47.99:0,48,1570	0/0:10,0:10:27.07:0,27,911	0/0:23,0:23:66.21:0,66,2332	0/0:16,0:16:48.16:0,48,2026	0/0:35,0:35:99:0,102,4302	1/1:2,12:14:36.11:852,36,0	0/0:22,0:22:66.18:0,66,2737	0/0:24,0:24:66.21:0,66,2601	0/0:14,0:14:42.14:0,42,1652	1/1:2,25:27:72.25:2038,72,0	0/0:16,0:16:48.16:0,48,2053	0/0:27,0:27:72.25:0,72,3055	0/0:23,0:23:66.21:0,66,2723	0/0:14,0:14:39.13:0,39,1653	1/1:4,20:24:45.15:1169,45,0	1/1:4,23:27:54.15:1441,54,0	1/1:2,22:24:66.20:1737,66,0	1/1:0,12:12:27.05:529,27,0	1/1:9,25:34:21.88:341,22,0	0/0:12,0:12:27.09:0,27,1135	0/0:13,0:13:36.12:0,36,1589	0/0:47,0:47:99:0,138,6009	0/0:28,0:28:78.22:0,78,2951	0/1:1,26:27:52.83:2031,0,53	1/1:3,25:28:66.23:1892,66,0	1/1:0,13:13:30.10:830,30,0
chr10	108533444	.	CCATG	C	8703.57	PASS	AB=0.783;AC=22;AF=0.407;AN=54;BaseQRankSum=17.184;DP=1027;FS=0.313;HRun=0;HaplotypeScore=188.5889;InbreedingCoeff=0.9241;MQ=60.86;MQ0=1;MQRankSum=-0.090;QD=19.83;ReadPosRankSum=3.088;VQSLOD=4.6520;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:52:0.33:0,0,1	1/1:6,0:21:8.48:76,8,0	./.	0/1:19,0:15:0:0,0,0	0/0:23,0:23:45.15:0,45,1057	0/0:20,0:20:45.14:0,45,1014	0/0:55,0:55:99:0,129,2951	1/1:16,16:32:45.13:683,45,0	0/0:53,0:53:99:0,144,3348	0/0:44,0:44:99:0,111,2529	0/0:11,0:11:30.10:0,30,728	0/0:43,0:43:99:0,105,2390	0/0:45,0:45:99:0,105,2405	0/0:55,0:55:99:0,138,3220	0/0:56,0:56:99:0,132,3055	0/0:38,0:38:81.28:0,81,1989	1/1:3,0:22:9.01:84,9,0	1/1:9,0:31:21.02:194,21,0	1/1:9,16:25:45.08:630,45,0	1/1:3,17:20:32.99:551,33,0	1/1:29,108:137:99:3861,231,0	0/0:34,0:34:81.22:0,81,1874	0/0:16,0:16:39.13:0,39,936	0/0:54,0:54:99:0,123,2854	0/0:26,0:26:63.20:0,63,1444	1/1:14,27:41:14.02:1300,14,0	1/1:4,15:19:30.10:472,30,0	1/1:2,18:20:51.17:852,51,0
chr10	108536211	.	GCA	G	596.31	PASS	AB=0.925;AC=17;AF=0.370;AN=46;BaseQRankSum=4.027;DP=589;FS=1.750;HRun=0;HaplotypeScore=87.5344;InbreedingCoeff=0.1675;MQ=72.70;MQ0=9;MQRankSum=-1.530;QD=1.85;ReadPosRankSum=1.134;VQSLOD=1.8726;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:29:25.90:26,0,133	0/0:4,0:4:9.03:0,9,122	./.	./.	0/1:14,1:15:22.95:23,0,79	0/0:14,0:15:18.05:0,18,240	0/0:24,0:24:3.01:0,3,44	./.	0/0:6,0:14:9:0,9,78	0/0:19,0:18:15.03:0,15,166	0/0:4,0:5:6:0,6,51	1/1:16,0:23:17.04:84,17,0	0/1:21,1:22:13.94:14,0,182	0/1:21,2:22:10.91:11,0,233	0/1:14,4:18:24.82:113,0,25	0/1:20,0:22:2.09:2,0,120	0/1:24,1:26:19.06:19,0,258	0/0:22,0:22:15.97:0,16,179	0/0:12,0:11:0:0,0,0	./.	1/1:55,0:56:0.34:0,0,0	0/0:17,0:17:6.02:0,6,87	0/0:13,0:13:0:0,0,0	1/1:29,12:42:41.42:406,41,0	0/0:14,0:14:15.05:0,15,211	1/1:15,0:19:2.84:14,3,0	1/1:21,0:25:5.48:24,5,0	./.
chr10	108536428	.	GA	G	561.66	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.679;DP=633;FS=4.778;HRun=1;HaplotypeScore=66.4251;InbreedingCoeff=0.9317;MQ=61.08;MQ0=16;MQRankSum=1.894;QD=18.12;ReadPosRankSum=-0.859;VQSLOD=3.5553;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,2033	0/0:6,0:6:17.78:0,18,217	0/0:23,0:10:9.36:0,9,243	0/0:20,0:8:17.40:0,17,215	0/0:13,0:13:36.09:0,36,514	0/0:23,0:23:66.18:0,66,1001	0/0:30,0:30:84.24:0,84,1279	0/0:30,0:30:87.21:0,87,1232	0/0:14,0:14:42.11:0,42,613	0/0:19,0:19:51.16:0,51,769	0/0:13,0:13:36.12:0,36,571	1/1:12,19:31:77.80:656,78,0	0/0:17,0:17:51.13:0,51,756	0/0:17,0:16:45.10:0,45,620	0/0:24,0:24:66.19:0,66,974	0/0:25,0:25:75.25:0,75,1168	0/0:31,0:31:90.22:0,90,1331	0/0:23,0:22:66.16:0,66,992	0/0:24,0:22:66.15:0,66,969	0/0:20,0:20:60.19:0,60,900	0/0:34,0:34:93.17:0,93,1339	0/0:20,0:20:54.18:0,54,850	0/0:17,0:17:51.17:0,51,794	0/0:32,0:32:96.30:0,96,1486	0/0:24,0:24:69.19:0,69,1001	0/0:26,0:25:75.24:0,75,1138	0/0:24,0:23:69.22:0,69,1035	0/0:9,0:9:27.07:0,27,392
chr10	108536432	.	GA	G	502.13	PASS	AB=0.864;AC=4;AF=0.071;AN=56;BaseQRankSum=7.807;DP=645;FS=4.430;HRun=10;HaplotypeScore=66.6608;InbreedingCoeff=0.3241;MQ=62.84;MQ0=16;MQRankSum=-0.067;QD=10.25;ReadPosRankSum=-1.359;VQSLOD=2.5053;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:45,1:46:87.93:0,88,1136	0/1:4,1:5:13.99:14,0,88	0/0:26,1:13:0.30:0,0,243	0/0:21,0:8:17.97:0,18,173	0/0:12,1:13:1.03:0,1,239	0/0:23,0:23:63.10:0,63,666	0/0:28,0:28:72.15:0,72,783	0/0:25,1:26:24.93:0,25,486	0/1:15,2:17:10.07:10,0,316	0/0:22,0:22:51.12:0,51,541	0/0:14,0:14:39.09:0,39,422	1/1:27,0:27:68.96:588,69,0	0/0:17,1:19:7.31:0,7,433	0/0:13,0:13:36.07:0,36,387	0/0:22,2:24:28.07:0,28,521	0/0:27,0:28:59.11:0,59,649	0/0:27,1:30:48.97:0,49,742	0/0:21,1:22:30.15:0,30,599	0/0:23,0:21:29.07:0,29,479	0/0:22,0:22:54.11:0,54,568	0/0:29,2:31:20.08:0,20,665	0/0:19,0:20:44.95:0,45,478	0/0:20,0:20:42.06:0,42,442	0/0:35,0:35:93.18:0,93,999	0/0:20,4:24:8.05:0,8,539	0/0:26,3:29:13.31:0,13,680	0/0:25,0:24:34.17:0,34,557	0/0:10,0:10:21.04:0,21,223
chr10	108538981	.	AGCCTTCGATG	A	2579.59	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.489;DP=801;FS=4.853;HRun=0;HaplotypeScore=229.0223;InbreedingCoeff=0.9983;MQ=83.91;MQ0=0;MQRankSum=-8.765;QD=69.72;ReadPosRankSum=0.285;VQSLOD=3.2754;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,6891	0/0:9,0:9:27.09:0,27,1324	0/0:23,0:23:66.23:0,66,3202	0/0:25,0:25:72.25:0,72,3370	0/0:15,0:15:45.15:0,45,2276	0/0:13,0:13:39.13:0,39,1871	0/0:40,0:40:99:0,120,5946	0/0:28,0:28:75.26:0,75,3566	0/0:37,0:37:99:0,111,5586	0/0:30,0:30:90.30:0,90,4591	0/0:12,0:12:33.11:0,33,1733	1/1:4,33:37:81.28:2674,81,0	0/0:41,0:41:99:0,120,6050	0/0:38,0:38:99:0,108,5291	0/0:27,0:27:81.28:0,81,4241	0/0:31,0:31:87.30:0,87,4204	0/0:29,0:29:84.27:0,84,4115	0/0:34,0:34:96.33:0,96,4814	0/0:28,0:28:84.29:0,84,4259	0/0:14,0:14:39.13:0,39,2064	0/0:71,0:71:99:0,205,10546	0/0:20,0:20:60.19:0,60,2951	0/0:12,0:12:33.11:0,33,1761	0/0:40,0:40:99:0,117,6185	0/0:23,0:23:69.24:0,69,3582	0/0:33,0:33:99:0,99,4841	0/0:31,0:31:93.32:0,93,4680	0/0:14,0:14:42.14:0,42,2128
chr10	108543653	.	AC	A	6442.59	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.524;DP=691;FS=5.479;HRun=4;HaplotypeScore=69.2507;InbreedingCoeff=0.9896;MQ=81.41;MQ0=0;MQRankSum=-6.580;QD=36.19;ReadPosRankSum=-0.682;VQSLOD=4.9701;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1607	0/0:5,0:5:15.05:0,15,225	0/0:16,0:16:47.65:0,48,682	0/0:23,0:23:45.05:0,45,742	0/0:17,0:17:51.15:0,51,734	0/0:24,0:24:72.24:0,72,1077	0/0:34,0:34:99:0,102,1489	1/1:1,24:25:72.23:931,72,0	0/0:28,0:28:78.26:0,78,1168	0/0:31,0:31:87.25:0,87,1242	0/0:7,0:7:21.07:0,21,314	0/0:30,0:30:90.23:0,90,1280	0/0:37,0:37:99:0,105,1534	0/0:41,0:41:99:0,123,1842	0/0:26,0:26:78.26:0,78,1165	0/0:20,0:20:60.20:0,60,898	0/0:28,0:28:84.28:0,84,1257	0/0:30,0:30:87.29:0,87,1302	1/1:1,20:21:60.19:779,60,0	1/1:0,7:7:21.07:272,21,0	1/1:2,67:69:99:2376,184,0	0/0:17,0:17:51.15:0,51,722	0/0:9,0:9:24.07:0,24,340	0/0:39,0:38:99:0,117,1731	0/0:14,0:14:39.13:0,39,585	1/1:0,28:28:84.27:1091,84,0	1/1:0,23:23:66.21:857,66,0	1/1:1,4:5:12:137,12,0
chr10	108547944	.	A	AC	4624.90	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-4.234;DP=904;FS=8.269;HRun=7;HaplotypeScore=170.6102;InbreedingCoeff=0.9997;MQ=63.86;MQ0=4;MQRankSum=-3.664;QD=20.93;ReadPosRankSum=-0.857;VQSLOD=2.8510;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:78.08:0,78,745	0/0:13,0:13:33.05:0,33,319	0/0:48,0:38:88.81:0,89,880	0/0:56,0:38:38.12:0,38,556	0/0:24,0:24:60.09:0,60,579	0/0:21,0:21:54.06:0,54,515	0/0:30,0:30:78.10:0,78,746	1/1:11,16:27:34.75:470,35,0	0/0:36,0:36:81.11:0,81,781	0/0:41,0:41:99:0,105,1014	0/0:12,0:12:27.04:0,27,260	0/0:50,0:50:69.58:0,70,678	0/0:37,0:36:90.11:0,90,857	0/0:29,0:29:81.12:0,81,779	0/0:34,0:34:87.10:0,87,833	0/0:33,0:33:81.09:0,81,770	0/0:31,0:32:74.16:0,74,681	0/0:16,0:17:36.76:0,37,424	1/1:8,12:20:42.12:495,42,0	1/1:7,23:30:43.27:510,43,0	1/1:9,43:53:67.41:847,67,0	0/0:33,0:33:90.60:0,91,864	0/0:19,0:19:45.05:0,45,429	0/0:41,0:41:98.08:0,98,951	0/0:30,0:30:82:0,82,778	1/1:13,27:40:77.32:897,77,0	1/1:6,22:28:57.17:688,57,0	1/1:5,18:23:60.18:718,60,0
chr10	108547959	.	TCACACACACA	T	4034.65	PASS	AB=0.965;AC=17;AF=0.304;AN=56;BaseQRankSum=9.137;DP=806;FS=10.580;HRun=0;HaplotypeScore=280.2447;InbreedingCoeff=0.3904;MQ=58.65;MQ0=11;MQRankSum=-7.064;QD=13.10;ReadPosRankSum=-1.002;VQSLOD=0.7181;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:36:52.63:206,0,53	0/0:13,0:13:4.66:0,5,80	0/0:37,0:23:2.99:0,3,23	0/0:42,0:20:3:0,3,26	0/0:22,0:23:42.09:0,42,1267	0/0:21,0:22:38.92:0,39,1318	0/0:32,0:35:60.18:0,60,2313	0/1:16,0:16:38.19:116,0,38	0/0:31,0:33:63.07:0,63,2092	0/0:34,0:35:45.75:0,46,1283	0/0:12,0:12:24.54:0,25,850	1/1:49,0:49:6.64:987,7,0	0/0:30,0:31:60.21:0,60,2576	0/0:31,0:33:66.14:0,66,2415	0/0:31,0:32:45.14:0,45,1900	0/0:27,0:31:63.19:0,63,2444	0/1:27,0:27:70.82:125,0,71	0/1:20,0:20:57.11:57,0,85	1/1:12,4:17:21:473,21,0	1/1:17,3:21:2.25:269,2,0	1/1:49,3:51:0.90:205,1,0	0/0:31,0:31:54.11:0,54,1729	0/0:17,0:17:24.08:0,24,1014	0/0:36,0:38:60.16:0,60,2398	0/0:30,0:31:54.11:0,54,1633	0/1:26,7:33:51.56:766,0,52	1/1:14,3:19:23.97:459,24,0	1/1:15,3:18:5.79:370,6,0
chr10	108547986	.	CACACA	C	1160.44	PASS	AB=0.974;AC=10;AF=0.179;AN=56;BaseQRankSum=13.546;DP=839;FS=6.662;HRun=0;HaplotypeScore=212.3040;InbreedingCoeff=-0.2249;MQ=50.96;MQ0=21;MQRankSum=-10.848;QD=4.55;ReadPosRankSum=6.320;VQSLOD=1.4165;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:41:99:172,0,303	0/1:9,5:14:89.66:164,0,90	0/0:29,0:8:20.90:0,21,242	0/0:39,0:12:4.24:0,4,348	0/0:22,0:21:54.18:0,54,1093	0/0:23,0:23:57.19:0,57,1244	0/0:44,0:44:99:0,112,2315	0/0:30,0:29:81.07:0,81,966	0/0:34,0:34:76.45:0,76,1886	0/0:33,0:32:92.81:0,93,1582	0/0:17,0:17:39.60:0,40,852	0/1:47,0:47:95.43:257,0,95	0/0:39,0:37:99:0,105,2336	0/0:31,0:31:87.76:0,88,2101	0/0:30,0:30:84.28:0,84,1837	0/0:33,0:33:93.26:0,93,2034	0/1:31,0:31:99:222,0,272	0/1:18,0:18:77.85:78,0,255	0/1:19,0:18:89.81:90,0,334	0/1:18,0:18:40.92:41,0,363	0/0:61,0:61:68.07:0,68,1161	0/0:30,0:29:78.26:0,78,1609	0/0:19,0:19:51.15:0,51,1044	0/0:34,0:34:96.32:0,96,2174	0/0:35,0:35:93.78:0,94,1876	0/1:32,0:31:99:117,0,641	0/1:16,0:16:83.94:84,0,299	0/1:18,0:18:80.97:81,0,296
chr10	108547987	.	ACACACACACACACACC	A	1877.54	PASS	AB=0.862;AC=3;AF=0.054;AN=56;BaseQRankSum=5.488;DP=843;FS=7.444;HRun=0;HaplotypeScore=368.1220;InbreedingCoeff=0.2480;MQ=51.16;MQ0=21;MQRankSum=-6.452;QD=19.97;ReadPosRankSum=4.426;VQSLOD=0.9057;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:99:0,104,1410	0/0:14,0:14:38.68:0,39,881	0/1:31,0:8:0.98:1,0,111	0/0:38,0:12:30.02:0,30,490	0/0:22,0:21:54.16:0,54,2162	0/0:23,0:23:48.13:0,48,2103	0/0:45,0:45:99:0,111,4991	0/0:30,0:29:80.24:0,80,1054	0/0:34,0:35:87.23:0,87,3901	0/0:33,0:32:91.23:0,91,3159	0/0:17,0:17:39.59:0,40,1758	0/1:14,33:47:1.16:1942,0,1	0/0:40,0:38:99:0,108,5016	0/0:32,0:32:87.26:0,87,4462	0/0:30,0:30:84.21:0,84,3698	0/0:33,0:33:87.04:0,87,4709	0/0:31,0:31:82.88:0,83,1303	0/0:18,0:18:50.69:0,51,705	0/0:19,0:18:21.58:0,22,343	0/0:19,0:19:18.42:0,18,489	0/0:61,0:61:88.63:0,89,1352	0/0:30,0:29:75.12:0,75,3206	0/0:19,0:19:48.08:0,48,2035	0/0:35,0:35:96.26:0,96,4624	0/0:35,0:35:93.24:0,93,3721	0/0:32,0:31:76.37:0,76,1064	0/1:16,0:16:23.23:23,0,292	0/0:16,0:16:38.53:0,39,378
chr10	108549696	.	A	AC	7911.38	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-14.013;DP=576;FS=1.464;HRun=6;HaplotypeScore=59.6430;InbreedingCoeff=0.9899;MQ=90.21;MQ0=0;MQRankSum=-2.525;QD=30.43;ReadPosRankSum=1.798;VQSLOD=5.5666;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:31:75.24:941,75,0	1/1:1,5:6:9.03:113,9,0	0/0:18,0:18:39.05:0,39,379	0/0:27,0:28:44.82:0,45,509	0/0:11,0:11:27.03:0,27,265	0/0:21,0:21:60.14:0,60,612	0/0:29,0:29:66.14:0,66,673	1/1:3,15:18:36.05:420,36,0	0/0:34,0:34:90.20:0,90,917	0/0:18,0:18:48.09:0,48,484	0/0:13,0:13:36.06:0,36,359	1/1:3,21:24:60.19:754,60,0	0/0:14,0:14:42.10:0,42,428	0/0:25,0:25:66.12:0,66,659	0/0:12,0:12:33.06:0,33,330	0/0:17,0:17:48.11:0,48,489	1/1:4,16:20:42.13:528,42,0	1/1:3,27:30:78.25:981,78,0	1/1:5,17:22:48.15:603,48,0	1/1:2,8:10:18.06:226,18,0	1/1:1,44:45:99:1623,129,0	0/0:21,0:21:54.10:0,54,543	0/0:8,0:8:21.03:0,21,207	0/0:31,0:31:84.18:0,84,857	0/0:16,0:16:36.07:0,36,366	1/1:1,21:22:54.16:666,54,0	1/1:3,18:22:54.17:679,54,0	1/1:0,10:10:30.10:377,30,0
chr10	108551468	.	CCCAGCCCAAG	C	6128.05	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.887;DP=652;FS=3.742;HRun=0;HaplotypeScore=195.6060;InbreedingCoeff=0.9983;MQ=88.50;MQ0=0;MQRankSum=-12.843;QD=71.26;ReadPosRankSum=0.707;VQSLOD=4.5377;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:78.27:2515,78,0	1/1:0,12:12:27.09:927,27,0	0/0:22,0:22:66.23:0,66,2981	0/0:29,0:29:80.07:0,80,3554	0/0:11,0:11:33.11:0,33,1813	0/0:21,0:21:63.22:0,63,3345	0/0:35,0:35:99:0,105,5356	0/0:21,0:21:63.22:0,63,2952	0/0:19,0:19:57.20:0,57,2998	0/0:24,0:24:72.25:0,72,3656	0/0:10,0:10:30.10:0,30,1379	0/0:32,0:32:96.33:0,96,5045	0/0:17,0:17:51.18:0,51,2688	0/0:43,0:43:99:0,129,6847	0/0:24,0:24:72.25:0,72,3802	0/0:25,0:25:75.26:0,75,3964	1/1:0,13:13:26.71:862,27,0	1/1:0,24:24:54.19:1823,54,0	0/0:18,0:18:54.19:0,54,2777	0/0:19,0:19:57.20:0,57,2848	0/0:55,0:55:99:0,166,8375	0/0:16,0:16:48.16:0,48,2621	0/0:8,0:8:24.07:0,24,1113	0/0:37,0:37:99:0,111,5695	0/0:21,0:21:60.21:0,60,2896	0/0:24,0:24:69.22:0,69,3266	0/0:26,0:26:75.26:0,75,3714	0/0:9,0:9:27.09:0,27,1418
chr10	108557425	.	GGTGTGTGT	G	3079.74	PASS	AB=0.859;AC=22;AF=0.407;AN=54;BaseQRankSum=7.791;DP=620;FS=11.097;HRun=0;HaplotypeScore=160.9230;InbreedingCoeff=0.6526;MQ=68.71;MQ0=18;MQRankSum=-9.785;QD=10.06;ReadPosRankSum=-1.374;VQSLOD=1.8488;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,12:36:1.51:251,0,2	1/1:3,0:8:11.57:63,12,0	./.	0/1:33,0:20:0.85:1,0,16	0/0:20,0:21:24.07:0,24,786	0/0:17,0:19:30.10:0,30,1018	0/0:31,0:36:51.62:0,52,1691	1/1:37,0:33:13.10:154,13,0	0/0:22,0:22:30.09:0,30,1130	0/0:16,0:16:21.06:0,21,535	0/0:14,0:14:21.05:0,21,747	1/1:10,0:27:7.33:334,7,0	0/0:23,0:23:54.12:0,54,1499	0/0:18,0:18:42.09:0,42,1221	0/0:32,0:33:63.17:0,63,1962	0/0:15,0:16:30.07:0,30,979	1/1:12,9:20:0.99:144,1,0	1/1:8,5:13:9.03:227,9,0	0/1:18,2:19:73.88:87,0,74	1/1:9,14:26:33.26:548,33,0	0/1:27,8:35:30.92:60,0,31	0/0:16,0:16:24.04:0,24,659	0/0:9,0:10:18.04:0,18,569	0/0:23,0:28:57.17:0,57,1871	0/0:14,0:14:24.07:0,24,863	1/1:12,5:18:15.02:304,15,0	1/1:6,14:21:29.42:735,29,0	1/1:3,7:10:1.54:362,2,0
chr10	108558359	.	G	GTT	5150.40	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=-7.203;DP=425;FS=9.839;HRun=1;HaplotypeScore=69.2775;InbreedingCoeff=0.9580;MQ=71.74;MQ0=0;MQRankSum=1.014;QD=36.02;ReadPosRankSum=-1.035;VQSLOD=3.8322;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:24.68:0,25,536	./.	0/0:16,0:14:36.91:0,37,480	0/0:12,0:13:18.04:0,18,163	0/0:15,0:17:41.88:0,42,591	0/0:9,0:10:27.07:0,27,387	0/0:20,0:20:57.19:0,57,898	1/1:1,15:18:51.17:912,51,0	0/0:13,0:16:39.13:0,39,578	0/0:10,0:12:36.12:0,36,558	0/0:13,0:14:34.76:0,35,517	1/1:3,17:21:20.88:390,21,0	0/0:6,0:6:18.06:0,18,287	0/0:13,0:14:40.38:0,40,616	0/0:13,0:13:39.13:0,39,612	0/0:17,0:17:50.65:0,51,749	0/0:14,0:14:15.31:0,15,128	0/0:6,0:11:11.99:0,12,144	1/1:3,11:15:44.46:636,44,0	1/1:0,12:12:30.01:390,30,0	1/1:3,15:20:35.92:637,36,0	0/0:13,0:13:35.65:0,36,545	0/0:15,0:15:32.46:0,32,498	0/0:21,0:21:60.19:0,60,932	0/0:14,0:15:39.11:0,39,566	1/1:1,24:25:66.11:1092,66,0	1/1:0,22:24:54.18:1034,54,0	1/1:0,5:5:3.01:61,3,0
chr10	108558633	.	G	GA	1362.28	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=-6.216;DP=415;FS=0.603;HRun=1;HaplotypeScore=69.6534;InbreedingCoeff=0.5165;MQ=72.48;MQ0=6;MQRankSum=1.352;QD=8.68;ReadPosRankSum=2.930;VQSLOD=1.2331;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:21:17.05:245,17,0	1/1:1,0:1:3.01:41,3,0	0/0:35,0:16:29.62:0,30,210	0/0:38,0:19:17.07:0,17,107	0/0:8,0:8:12:0,12,118	0/0:6,0:6:9:0,9,83	0/0:25,0:25:63.88:0,64,694	0/1:21,0:21:5.56:66,0,6	0/0:7,0:7:11.12:0,11,54	0/0:11,0:11:20.87:0,21,195	0/0:6,0:6:9:0,9,78	0/0:17,0:17:32.92:0,33,307	0/0:8,0:7:14.71:0,15,123	0/0:16,0:16:24.20:0,24,195	0/0:14,0:14:27.95:0,28,304	0/0:13,0:13:21.01:0,21,204	1/1:0,22:22:39.13:532,39,0	1/1:2,15:17:25.52:371,26,0	1/1:12,0:10:0.37:95,0,0	0/1:12,0:12:8.20:37,0,8	0/1:28,0:28:44.49:44,0,47	0/0:9,0:9:15.04:0,15,184	0/0:6,0:6:8.17:0,8,106	0/0:18,0:18:42.93:0,43,452	0/0:5,0:5:11.92:0,12,98	1/1:17,0:17:0.56:94,1,0	0/0:15,0:15:25.85:0,26,97	0/1:6,0:6:6.55:7,0,28
chr10	108558754	.	CAG	C	3771.96	PASS	AB=0.982;AC=15;AF=0.268;AN=56;BaseQRankSum=10.956;DP=748;FS=0.840;HRun=0;HaplotypeScore=117.5250;InbreedingCoeff=0.8923;MQ=61.47;MQ0=23;MQRankSum=-1.701;QD=14.23;ReadPosRankSum=-0.051;VQSLOD=3.4058;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:40.33:0,40,718	0/0:7,0:7:18.06:0,18,319	0/0:62,0:25:45.89:0,46,870	0/1:108,0:37:13.75:14,0,540	0/0:20,0:20:48.16:0,48,838	0/0:23,0:23:66.23:0,66,1157	0/0:26,0:26:63.22:0,63,1107	1/1:5,20:22:36.04:446,36,0	0/0:21,0:21:57.17:0,57,980	0/0:25,0:25:69.23:0,69,1189	0/0:18,0:18:45.14:0,45,744	0/0:31,0:31:84.26:0,84,1407	0/0:15,0:15:45.15:0,45,788	0/0:21,0:21:63.22:0,63,1105	0/0:29,0:29:81.23:0,81,1351	0/0:20,0:20:57.17:0,57,945	0/0:24,0:24:35.94:0,36,601	0/0:17,0:17:33.11:0,33,521	1/1:1,18:19:51.17:693,51,0	1/1:7,10:15:14.13:185,14,0	1/1:12,25:35:54.10:741,54,0	0/0:16,0:16:39.13:0,39,676	0/0:21,0:21:57.18:0,57,955	0/0:31,0:31:78.24:0,78,1327	0/0:19,0:19:53.94:0,54,852	1/1:2,22:23:7.29:713,7,0	1/1:6,13:19:44.57:590,45,0	1/1:1,13:14:30:389,30,0
chr10	108558775	.	C	CAGACAG	4358.36	PASS	AB=0.855;AC=12;AF=0.214;AN=56;BaseQRankSum=5.508;DP=779;FS=14.010;HRun=0;HaplotypeScore=194.1657;InbreedingCoeff=0.7793;MQ=68.21;MQ0=18;MQRankSum=-7.878;QD=26.10;ReadPosRankSum=-3.653;VQSLOD=2.8624;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:37:3.76:0,4,27	0/0:7,0:7:15.02:0,15,276	0/0:81,0:38:36.39:0,36,468	0/0:118,0:50:12.83:0,13,539	0/0:17,0:17:24.08:0,24,490	0/0:26,0:25:54.18:0,54,1101	0/0:28,0:28:57.19:0,57,1133	0/1:32,3:32:1.34:698,0,1	0/0:19,0:19:23.86:0,24,482	0/0:24,0:24:54.01:0,54,1011	0/0:12,0:12:21.07:0,21,429	0/0:33,0:33:83.29:0,83,1597	0/0:16,0:16:33.09:0,33,619	0/0:26,0:26:60.19:0,60,1154	0/0:30,0:30:63.12:0,63,1258	0/0:16,0:16:39.13:0,39,766	0/0:17,0:24:20.15:0,20,237	0/0:2,0:11:12.04:0,12,165	1/1:14,3:17:30.07:724,30,0	1/1:6,8:13:8.82:236,9,0	1/1:24,8:32:18.49:261,18,0	0/0:15,0:15:33.11:0,33,651	0/0:18,0:17:30.10:0,30,597	0/0:35,0:35:81.06:0,81,1591	0/0:18,0:18:33.11:0,33,681	0/1:22,8:27:34.94:954,0,35	1/1:7,14:22:27.09:879,27,0	1/1:9,5:14:27.04:606,27,0
chr10	108558791	.	CAG	C	370.47	PASS	AB=0.903;AC=7;AF=0.125;AN=56;BaseQRankSum=8.602;DP=723;FS=20.213;HRun=0;HaplotypeScore=140.4290;InbreedingCoeff=0.1085;MQ=64.03;MQ0=24;MQRankSum=-4.589;QD=2.72;ReadPosRankSum=-2.301;VQSLOD=0.4639;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:4.86:0,5,105	0/0:6,0:6:18.03:0,18,287	0/0:64,0:27:25.54:0,26,628	0/0:109,1:46:42.11:0,42,706	0/0:12,0:12:30.10:0,30,524	0/0:26,0:25:66.23:0,66,1161	0/0:27,0:27:69.22:0,69,1174	0/1:25,8:31:76:76,0,826	0/0:13,0:13:26.18:0,26,513	0/0:25,0:25:75.25:0,75,1297	0/0:11,0:11:23.61:0,24,420	0/0:33,0:33:96.31:0,96,1640	0/0:14,0:14:33.09:0,33,555	0/0:25,0:25:63:0,63,1059	0/0:25,0:25:69.22:0,69,1181	0/0:18,0:18:51.17:0,51,883	0/0:23,0:23:2.68:0,3,198	1/1:10,0:10:9.49:32,9,0	0/1:16,3:15:84.21:84,0,407	0/0:17,2:16:11:0,11,292	0/1:31,2:31:99:182,0,184	0/0:13,0:13:36.12:0,36,634	0/0:16,0:15:33.11:0,33,567	0/0:34,0:34:93.26:0,93,1565	0/0:13,0:13:33.11:0,33,579	0/1:25,3:25:73.55:74,0,601	0/0:18,3:21:7.45:0,7,284	0/1:13,0:12:53.67:54,0,206
chr10	108561248	.	TA	T	281.56	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.831;DP=527;FS=6.323;HRun=8;HaplotypeScore=55.9655;InbreedingCoeff=0.9533;MQ=61.97;MQ0=1;MQRankSum=0.189;QD=18.77;ReadPosRankSum=-0.043;VQSLOD=3.1633;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.28:0,96,1147	0/0:4,0:4:12.04:0,12,145	0/0:14,0:9:27.07:0,27,309	0/0:6,0:5:15.05:0,15,181	0/0:24,0:24:66.20:0,66,797	0/0:16,0:16:45.14:0,45,543	0/0:22,0:22:60.17:0,60,713	0/0:37,0:37:99:0,99,1154	0/0:15,0:15:45.14:0,45,543	0/0:18,0:18:48.13:0,48,559	0/0:23,0:23:66.17:0,66,766	1/1:1,14:15:39.06:376,39,0	0/0:20,0:20:51.16:0,51,615	0/0:19,0:19:48.15:0,48,579	0/0:16,0:16:48.15:0,48,580	0/0:16,0:16:45.14:0,45,543	0/0:18,0:18:51.13:0,51,602	0/0:19,0:19:48.15:0,48,579	0/0:15,0:15:39.11:0,39,459	0/0:19,0:19:57.16:0,57,674	0/0:25,0:25:72.21:0,72,858	0/0:21,0:21:54.17:0,54,652	0/0:14,0:14:33.09:0,33,387	0/0:16,0:16:48.15:0,48,580	0/0:24,0:24:63.19:0,63,760	0/0:33,0:33:93.28:0,93,1119	0/0:16,0:16:48.14:0,48,571	0/0:9,0:9:27.02:0,27,285
chr10	108561364	.	G	GA	10497.99	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=12.496;DP=591;FS=20.230;HRun=2;HaplotypeScore=75.7803;InbreedingCoeff=0.9937;MQ=88.25;MQ0=0;MQRankSum=-3.845;QD=39.47;ReadPosRankSum=2.634;VQSLOD=2.9436;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:99:1553,108,0	1/1:0,7:8:15.05:214,15,0	0/0:17,0:17:45.03:0,45,483	0/0:26,0:26:67.68:0,68,744	0/0:9,0:9:24.08:0,24,297	0/0:21,0:21:63.17:0,63,764	0/0:36,0:36:99:0,105,1275	1/1:1,36:37:99:1512,105,0	0/0:29,0:29:81.24:0,81,989	0/0:16,0:16:48.14:0,48,586	0/0:12,0:12:27.07:0,27,335	0/0:17,0:17:51.10:0,51,589	0/0:19,0:19:54.16:0,54,654	0/0:19,0:19:54.14:0,54,642	0/0:26,0:26:66.20:0,66,806	0/0:19,0:19:57.18:0,57,706	1/1:2,28:30:75.20:1055,75,0	1/1:0,28:28:81.27:1166,81,0	1/1:1,28:29:81.24:1138,81,0	1/1:0,6:6:15.05:216,15,0	1/1:1,49:50:99:2006,141,0	0/0:10,0:10:30.08:0,30,359	0/0:15,0:15:45.13:0,45,539	0/0:24,0:24:69.21:0,69,843	0/0:10,0:10:30.06:0,30,345	1/1:1,21:22:63.21:904,63,0	1/1:2,11:13:33.11:474,33,0	1/1:0,6:6:18.06:259,18,0
chr10	108562562	.	GT	G	6494.08	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.019;DP=763;FS=6.648;HRun=2;HaplotypeScore=79.0960;InbreedingCoeff=0.9999;MQ=96.06;MQ0=0;MQRankSum=-6.787;QD=34.00;ReadPosRankSum=0.338;VQSLOD=4.7925;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,129,1885	0/0:14,0:14:42.13:0,42,591	0/0:41,0:41:99:0,114,1617	0/0:34,0:34:93.31:0,93,1349	0/0:20,0:20:60.18:0,60,860	0/0:23,0:23:66.21:0,66,970	0/0:28,0:28:81.17:0,81,1092	1/1:1,34:35:96.28:1205,96,0	0/0:30,0:30:84.25:0,84,1191	0/0:42,0:42:99:0,117,1752	0/0:12,0:12:36.10:0,36,514	0/0:37,0:37:99:0,111,1574	0/0:26,0:26:78.26:0,78,1167	0/0:23,0:23:66.20:0,66,947	0/0:27,0:27:81.27:0,81,1213	0/0:25,0:25:75.24:0,75,1104	0/0:24,0:23:69.20:0,69,972	0/0:18,0:18:51.06:0,51,708	1/1:0,17:17:48.12:605,48,0	1/1:0,16:16:48.11:604,48,0	1/1:3,47:50:99:1632,126,0	0/0:28,0:28:81.27:0,81,1213	0/0:21,0:21:57.19:0,57,851	0/0:27,0:27:81.27:0,81,1212	0/0:25,0:25:72.21:0,72,1039	1/1:1,31:32:93.30:1206,93,0	1/1:2,29:31:65.77:854,66,0	1/1:0,10:10:30.10:389,30,0
chr10	108563019	.	TACACACACACAC	T	2587.16	PASS	AB=0.899;AC=14;AF=0.259;AN=54;BaseQRankSum=6.055;DP=769;FS=1.935;HRun=0;HaplotypeScore=253.2817;InbreedingCoeff=0.5644;MQ=56.87;MQ0=8;MQRankSum=-6.421;QD=10.87;ReadPosRankSum=-0.866;VQSLOD=2.5150;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:43:37.76:0,38,920	0/1:8,0:9:25.53:26,0,141	0/0:33,0:19:3.01:0,3,44	./.	0/0:15,0:15:10.94:0,11,601	0/0:22,0:22:27.09:0,27,1189	0/0:20,0:35:42.62:0,43,1303	0/1:40,0:38:33.96:152,0,34	0/0:28,0:29:60.04:0,60,2297	0/0:30,0:30:55.65:0,56,1504	0/0:16,0:16:15.21:0,15,622	1/1:12,0:35:13.88:575,14,0	0/0:30,0:31:60.50:0,61,2229	0/0:23,0:24:27.09:0,27,1210	0/0:31,0:31:63.04:0,63,2036	0/0:23,0:24:51.13:0,51,2356	0/0:15,0:29:32.97:0,33,721	0/0:8,0:27:36.59:0,37,861	1/1:20,5:25:9.79:211,10,0	1/1:8,13:21:2.56:143,3,0	0/1:47,0:47:18.68:128,0,19	0/0:21,0:20:27.09:0,27,1263	0/0:23,0:23:48.16:0,48,2354	0/0:46,0:47:74.46:0,74,3215	0/0:17,0:17:29.63:0,30,1437	1/1:12,14:25:18.66:511,19,0	0/1:13,9:22:2.54:344,0,3	1/1:4,8:12:22.89:669,23,0
chr10	108563609	.	C	CT	12153.19	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-14.565;DP=610;FS=1.716;HRun=0;HaplotypeScore=57.1115;InbreedingCoeff=0.9948;MQ=83.89;MQ0=0;MQRankSum=-1.845;QD=42.20;ReadPosRankSum=1.713;VQSLOD=5.4786;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:41:99:1772,111,0	1/1:0,8:8:21.07:336,21,0	0/0:17,0:17:48.13:0,48,648	0/0:18,0:18:52.95:0,53,666	0/0:13,0:13:39.12:0,39,521	0/0:17,0:17:51.17:0,51,713	0/0:28,0:28:84.26:0,84,1153	1/1:0,28:28:78.21:1188,78,0	0/0:21,0:21:63.20:0,63,865	0/0:16,0:16:45.15:0,45,623	0/0:5,0:5:12.04:0,12,167	0/0:24,0:24:72.22:0,72,986	0/0:23,0:23:66.16:0,66,878	0/0:27,0:27:75.22:0,75,1008	0/0:24,0:24:72.23:0,72,988	0/0:24,0:24:72.21:0,72,970	1/1:0,45:45:99:1964,123,0	1/1:0,35:35:99:1582,99,0	1/1:0,14:14:42.14:658,42,0	1/1:0,9:9:27.08:380,27,0	1/1:1,46:47:99:1726,108,0	0/0:16,0:16:48.07:0,48,612	0/0:10,0:10:30.10:0,30,414	0/0:25,0:25:72.22:0,72,969	0/0:14,0:14:42.08:0,42,517	1/1:0,24:24:72.24:1109,72,0	1/1:1,21:22:54.18:862,54,0	1/1:0,15:15:36.12:575,36,0
chr10	108564294	.	TGCGG	T	11450.64	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=13.351;DP=567;FS=10.122;HRun=0;HaplotypeScore=102.8842;InbreedingCoeff=0.9906;MQ=83.24;MQ0=0;MQRankSum=-6.260;QD=43.87;ReadPosRankSum=2.635;VQSLOD=5.0922;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,35:36:75.26:1397,75,0	1/1:1,7:8:15.05:281,15,0	0/0:19,0:19:54.19:0,54,1384	0/0:16,0:16:45.15:0,45,1130	0/0:16,0:16:39.13:0,39,1006	0/0:17,0:17:51.16:0,51,1243	0/0:26,0:26:78.25:0,78,2048	1/1:6,20:26:60.21:1110,60,0	0/0:28,0:28:69.24:0,69,1856	0/0:20,0:20:54.18:0,54,1392	0/0:6,0:6:12.04:0,12,322	1/1:4,15:19:39.13:740,39,0	0/0:32,0:32:93.28:0,93,2389	0/0:26,0:26:75.21:0,75,1940	0/0:18,0:18:54.19:0,54,1420	0/0:11,0:11:27.09:0,27,711	1/1:0,32:32:75.26:1418,75,0	1/1:0,23:23:54.19:1025,54,0	1/1:1,9:10:27.06:477,27,0	1/1:1,9:10:24.08:451,24,0	1/1:3,41:44:96.32:1819,96,0	0/0:8,0:8:15.03:0,15,348	0/0:17,0:17:48.16:0,48,1243	0/0:29,0:29:81.28:0,81,2179	0/0:17,0:17:51.18:0,51,1317	1/1:2,16:18:48.16:857,48,0	1/1:0,25:25:69.24:1310,69,0	1/1:0,10:10:30.10:566,30,0
chr10	108564449	.	GT	G	4901.20	PASS	AB=0.563;AC=21;AF=0.375;AN=56;BaseQRankSum=8.991;DP=551;FS=0.344;HRun=10;HaplotypeScore=69.6466;InbreedingCoeff=0.8633;MQ=82.00;MQ0=1;MQRankSum=-1.913;QD=20.34;ReadPosRankSum=1.806;VQSLOD=5.7303;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:30:71.98:625,72,0	1/1:4,10:14:20.97:182,21,0	0/0:23,0:20:2.29:0,2,239	0/0:21,0:17:26.76:0,27,217	0/0:18,0:18:48.11:0,48,513	0/0:20,0:20:54.15:0,54,597	0/0:22,2:24:7.55:0,8,534	1/1:5,19:24:47.89:402,48,0	0/0:27,0:27:75.16:0,75,805	0/0:15,0:15:30.08:0,30,331	0/0:9,0:9:21.06:0,21,232	0/0:13,0:13:39.03:0,39,398	0/0:14,0:16:41.92:0,42,434	0/0:26,0:26:37.65:0,38,589	0/0:23,0:23:63.16:0,63,689	0/0:12,0:12:33.08:0,33,358	1/1:2,33:36:82.98:709,83,0	1/1:1,26:27:74.98:651,75,0	0/1:4,14:18:6.09:288,0,6	1/1:0,6:6:18:156,18,0	1/1:4,27:31:77.97:674,78,0	0/0:10,1:11:1.02:0,1,232	0/0:15,0:15:35.98:0,36,362	0/0:27,0:28:68.96:0,69,722	0/0:9,0:9:15.02:0,15,155	1/1:2,15:17:44.93:382,45,0	1/1:1,19:20:53.82:468,54,0	1/1:0,18:18:41.99:364,42,0
chr10	108564820	.	CTGTCTGTCTGTT	C	2074.29	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.035;DP=717;FS=1.662;HRun=0;HaplotypeScore=223.1108;InbreedingCoeff=0.9938;MQ=70.56;MQ0=3;MQRankSum=-6.912;QD=22.30;ReadPosRankSum=-0.150;VQSLOD=2.9140;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,32:36:32.65:1028,33,0	0/0:19,0:19:51.15:0,51,2593	0/0:39,0:26:45.18:0,45,1463	0/0:37,0:28:35.58:0,36,2257	0/0:24,0:24:69.24:0,69,3547	0/0:29,0:29:78.27:0,78,4320	0/0:34,0:34:84.07:0,84,4088	0/0:35,0:35:84.28:0,84,3505	0/0:25,0:25:63.20:0,63,3092	0/0:27,0:27:63.22:0,63,2865	0/0:13,0:13:33.58:0,34,1670	0/0:31,0:31:78.21:0,78,3812	0/0:18,0:18:54.19:0,54,2929	0/0:26,0:26:69.24:0,69,3519	0/0:24,0:24:57.20:0,57,3276	0/0:23,0:23:60.21:0,60,3176	1/1:5,23:28:18.06:586,18,0	1/1:7,22:29:18.06:601,18,0	0/0:20,0:19:48.16:0,48,2329	0/0:12,0:12:36.12:0,36,1443	0/0:44,0:44:99:0,108,5242	0/0:21,0:21:54.19:0,54,2464	0/0:12,0:12:33.11:0,33,1367	0/0:36,0:36:96.33:0,96,4988	0/0:16,0:16:48.16:0,48,2750	0/0:15,0:15:39.13:0,39,1615	0/0:27,0:27:66.23:0,66,2900	0/0:16,0:16:48.16:0,48,2289
chr10	108566355	.	AC	A	3735.41	PASS	AB=0.820;AC=24;AF=0.429;AN=56;BaseQRankSum=0.622;DP=537;FS=0.000;HRun=10;HaplotypeScore=68.4281;InbreedingCoeff=0.8329;MQ=84.64;MQ0=0;MQRankSum=-2.072;QD=13.11;ReadPosRankSum=6.607;VQSLOD=3.2666;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,28:44:65.96:572,66,0	1/1:3,7:10:20.95:175,21,0	0/0:22,0:21:32.66:0,33,306	0/0:19,0:19:11.89:0,12,92	0/0:10,0:10:17.93:0,18,174	0/0:20,0:20:29.03:0,29,347	0/0:29,0:29:60.44:0,60,611	0/1:10,9:19:9.22:158,0,9	0/0:11,0:11:32.11:0,32,330	0/0:12,0:12:14.96:0,15,149	0/0:9,0:9:15.02:0,15,155	1/1:6,0:26:42.77:126,43,0	0/0:14,0:14:36.05:0,36,369	0/0:22,1:23:34.34:0,34,561	0/0:16,0:16:42.07:0,42,428	0/0:17,0:17:24.06:0,24,265	1/1:7,28:35:83.96:728,84,0	1/1:3,18:21:44.98:390,45,0	1/1:6,12:19:5.88:276,6,0	1/1:7,6:13:20.98:181,21,0	1/1:13,10:23:10.82:261,11,0	0/1:24,1:25:10.07:10,0,342	0/0:13,0:13:23.98:0,24,220	0/0:26,0:26:62.98:0,63,661	0/0:11,0:11:15.04:0,15,166	1/1:11,11:21:41.99:363,42,0	1/1:3,16:19:35.99:312,36,0	1/1:6,3:9:20.99:181,21,0
chr10	108566996	.	TAC	T	1508.77	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.251;DP=1175;FS=12.823;HRun=0;HaplotypeScore=157.1609;InbreedingCoeff=0.9869;MQ=60.91;MQ0=3;MQRankSum=1.284;QD=26.94;ReadPosRankSum=2.659;VQSLOD=4.6867;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,122,1957	0/0:12,0:12:30.10:0,30,498	0/0:42,0:30:53.19:0,53,859	0/0:54,0:39:66.96:0,67,954	0/0:34,0:34:90.25:0,90,1426	0/0:28,0:28:75.26:0,75,1235	0/0:31,0:31:81.26:0,81,1323	0/0:50,1:51:70.16:0,70,1685	0/0:54,0:54:99:0,138,2270	0/0:45,1:45:99:0,123,1947	0/0:31,0:31:78.27:0,78,1297	1/1:7,49:56:99:1604,126,0	0/0:60,0:60:99:0,172,2844	0/0:49,0:49:99:0,117,1934	0/0:80,0:79:99:0,208,3363	0/0:40,1:41:82.27:0,82,1887	0/0:26,0:26:54.54:0,55,916	0/0:29,0:29:41.40:0,41,1072	0/0:25,1:26:15.99:0,16,812	0/0:33,0:33:87.28:0,87,1416	0/0:106,1:106:99:0,284,4638	0/0:42,0:42:99:0,108,1726	0/0:32,0:32:78.03:0,78,1304	0/0:37,0:37:81.28:0,81,1351	0/0:24,0:23:57.19:0,57,948	0/0:47,0:47:99:0,120,1984	0/0:28,0:28:66.23:0,66,1096	0/0:23,0:23:57.17:0,57,925
chr10	108567184	.	G	GAC	2923.41	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-9.436;DP=1336;FS=0.478;HRun=0;HaplotypeScore=173.2264;InbreedingCoeff=1.0000;MQ=65.35;MQ0=1;MQRankSum=-0.536;QD=38.47;ReadPosRankSum=1.032;VQSLOD=4.0731;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,123,1615	0/0:28,0:28:66.21:0,66,867	0/0:41,0:34:60.64:0,61,940	0/0:50,0:41:68.35:0,68,839	0/0:38,0:38:99:0,99,1301	0/0:35,0:35:96.30:0,96,1247	0/0:34,0:34:86.96:0,87,1111	0/0:58,0:58:99:0,144,1881	0/0:74,0:74:99:0,208,2688	0/0:61,0:61:99:0,166,2115	0/0:20,0:20:49.04:0,49,633	1/1:7,69:76:99:3018,178,0	0/0:64,0:64:99:0,168,2161	0/0:63,0:63:99:0,165,2138	0/0:71,0:71:99:0,175,2243	0/0:70,0:70:99:0,193,2480	0/0:21,0:21:63.15:0,63,793	0/0:26,0:26:72.21:0,72,929	0/0:26,0:26:60.19:0,60,789	0/0:47,0:47:99:0,115,1555	0/0:91,0:90:99:0,243,3133	0/0:49,0:49:99:0,132,1704	0/0:38,0:38:99:0,102,1340	0/0:67,0:67:99:0,174,2287	0/0:30,0:29:80.81:0,81,1049	0/0:53,0:53:99:0,150,1960	0/0:23,0:23:66.19:0,66,838	0/0:28,0:28:78.24:0,78,1009
chr10	108567448	.	G	GCA	14562.90	PASS	AB=0.905;AC=18;AF=0.321;AN=56;BaseQRankSum=-18.051;DP=1150;FS=3.709;HRun=0;HaplotypeScore=166.4682;InbreedingCoeff=0.8596;MQ=59.80;MQ0=5;MQRankSum=0.774;QD=32.80;ReadPosRankSum=0.819;VQSLOD=6.5352;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:6.74:0,7,23	0/0:18,0:18:18.96:0,19,65	0/0:41,0:20:38.98:0,39,453	0/0:42,0:27:63.20:0,63,808	0/0:32,0:32:87.27:0,87,1117	0/0:32,0:32:78.23:0,78,985	0/0:49,0:49:99:0,114,1439	1/1:15,30:46:75.43:1548,75,0	0/0:51,0:51:99:0,135,1710	0/0:40,0:40:99:0,111,1386	0/0:20,0:20:54.18:0,54,702	1/1:8,54:61:99:1681,99,0	0/0:56,0:56:99:0,141,1818	0/0:28,0:28:78.25:0,78,1013	0/0:60,0:60:99:0,166,2131	0/0:51,0:51:99:0,132,1703	0/1:19,0:19:33.01:37,0,33	0/1:13,4:16:1.03:223,0,1	1/1:10,14:21:41.55:662,42,0	1/1:4,36:40:84.29:1429,84,0	1/1:24,86:108:99:4666,280,0	0/0:44,0:44:99:0,129,1662	0/0:29,0:29:72.22:0,72,921	0/0:44,0:44:99:0,108,1374	0/0:32,0:32:72.82:0,73,1026	1/1:7,50:57:99:2439,147,0	1/1:4,21:25:42.14:707,42,0	1/1:10,33:43:66.85:1170,67,0
chr10	108567451	.	CACACACTCAT	C	2704.54	PASS	AB=0.893;AC=12;AF=0.214;AN=56;BaseQRankSum=-0.856;DP=1162;FS=16.524;HRun=0;HaplotypeScore=368.6909;InbreedingCoeff=0.1647;MQ=58.35;MQ0=11;MQRankSum=-2.355;QD=6.63;ReadPosRankSum=-3.932;VQSLOD=0.5402;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,28:35:12.13:277,0,12	1/1:1,17:18:26.96:841,27,0	0/0:44,0:18:44.91:0,45,1428	0/0:40,0:25:62.57:0,63,2123	0/0:31,0:31:87.28:0,87,3590	0/0:32,0:32:87.27:0,87,3843	0/0:48,0:48:99:0,123,4870	0/1:48,0:48:99:223,0,2663	0/0:52,0:52:99:0,138,5703	0/0:48,0:48:99:0,135,5478	0/0:19,0:19:54.19:0,54,2727	0/1:59,0:58:50.56:51,0,2851	0/0:56,0:56:99:0,157,6602	0/0:30,0:30:84.29:0,84,3562	0/0:63,0:63:99:0,181,8331	0/0:50,0:50:99:0,138,5640	0/1:5,13:18:24.93:188,0,25	1/1:12,4:16:27.09:756,27,0	0/1:24,0:21:27.30:27,0,997	0/0:43,0:43:91.91:0,92,3474	0/1:108,0:106:99:271,0,8588	0/0:44,0:44:99:0,129,5685	0/0:31,0:31:84.29:0,84,3588	0/0:45,0:45:99:0,117,5313	0/0:33,0:33:89.95:0,90,3776	0/1:55,0:55:99:224,0,3782	0/1:26,0:25:10.91:11,0,1399	0/0:44,0:44:81.59:0,82,2864
chr10	108567590	.	C	CTT	2064.97	PASS	AB=0.941;AC=3;AF=0.054;AN=56;BaseQRankSum=0.164;DP=982;FS=6.761;HRun=1;HaplotypeScore=136.7000;InbreedingCoeff=0.6885;MQ=67.39;MQ0=6;MQRankSum=-1.728;QD=33.31;ReadPosRankSum=-1.524;VQSLOD=3.1116;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,122,1967	0/0:14,0:14:39.10:0,39,586	0/0:34,0:27:60.96:0,61,994	0/0:50,0:44:99:0,108,1529	0/0:31,0:31:93.32:0,93,1515	0/0:21,0:21:60.16:0,60,926	0/0:36,0:36:99:0,105,1687	0/0:44,0:44:99:0,132,2087	0/0:36,0:36:99:0,108,1682	0/0:52,0:52:99:0,130,2424	0/0:14,0:14:42.12:0,42,636	1/1:1,43:46:99:2158,117,0	0/0:51,0:51:99:0,153,2438	0/0:40,0:40:99:0,120,1925	0/0:49,0:49:99:0,147,2321	0/0:50,0:50:99:0,147,2293	0/0:24,0:24:66.21:0,66,1050	0/1:15,1:16:7.19:7,0,581	0/0:21,0:21:63.20:0,63,985	0/0:31,0:31:90.27:0,90,1395	0/0:51,0:51:99:0,137,2223	0/0:36,0:36:99:0,108,1683	0/0:19,0:19:54.18:0,54,878	0/0:38,1:39:99:0,108,1733	0/0:35,0:35:99:0,105,1647	0/0:45,0:45:99:0,135,2158	0/0:26,0:26:75.18:0,75,1093	0/0:20,0:20:54.18:0,54,879
chr10	108567643	.	T	TGCGCGC	797.01	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.200;DP=920;FS=17.671;HRun=0;HaplotypeScore=219.1634;InbreedingCoeff=0.9906;MQ=58.70;MQ0=17;MQRankSum=0.262;QD=23.44;ReadPosRankSum=-3.492;VQSLOD=1.5771;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:70,0:70:81.98:0,82,2885	0/0:10,0:10:17.95:0,18,317	0/0:51,0:23:66.22:0,66,1390	0/0:66,0:31:51.48:0,51,1793	0/0:24,0:24:60.19:0,60,1265	0/0:24,0:24:69.22:0,69,1392	0/0:34,0:34:93.75:0,94,1909	0/0:22,0:21:52.36:0,52,987	0/0:33,0:33:84.27:0,84,1781	0/0:42,0:42:99:0,111,2296	0/0:15,0:17:41.97:0,42,957	1/1:30,4:34:41.68:892,42,0	0/0:32,0:32:84.27:0,84,1881	0/0:36,0:36:99:0,99,2270	0/0:39,0:39:92.80:0,93,2389	0/0:44,0:44:99:0,117,2509	0/0:32,0:31:72.19:0,72,1320	0/0:22,0:22:28.32:0,28,884	0/0:17,0:15:42.11:0,42,796	0/0:19,0:19:35.97:0,36,850	0/0:51,0:50:99:0,102,2232	0/0:25,0:25:60.21:0,60,1422	0/0:16,0:16:33.11:0,33,721	0/0:43,0:43:99:0,120,2690	0/0:36,0:37:99:0,102,2240	0/0:43,0:43:99:0,123,2725	0/0:15,0:15:42.14:0,42,935	0/0:22,0:22:50.85:0,51,1082
chr10	108567644	.	GCA	G	537.45	PASS	AB=0.901;AC=13;AF=0.250;AN=52;BaseQRankSum=4.123;DP=936;FS=2.621;HRun=0;HaplotypeScore=144.6349;InbreedingCoeff=-0.3306;MQ=57.72;MQ0=18;MQRankSum=1.123;QD=1.37;ReadPosRankSum=-0.092;VQSLOD=2.6108;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:69,0:73:99:0,107,1011	0/0:6,0:12:11.02:0,11,79	./.	./.	0/1:20,4:24:64.07:64,0,314	0/1:21,3:24:96.02:96,0,235	0/1:31,2:34:67:67,0,470	0/1:23,0:22:38.32:38,0,236	0/1:25,6:33:82.14:82,0,386	0/1:39,4:44:27.96:28,0,607	0/0:17,0:17:24.04:0,24,293	0/0:35,0:40:26.80:0,27,201	0/0:31,1:32:18.01:0,18,665	0/0:35,1:36:23.69:0,24,729	0/0:40,0:40:27.04:0,27,783	0/1:41,2:43:30.55:31,0,773	0/0:18,1:33:14.82:0,15,424	0/0:15,0:22:39.63:0,40,341	0/1:19,0:17:14.47:14,0,93	0/0:14,0:17:21.06:0,21,294	0/1:44,9:52:6.09:6,0,649	0/0:24,0:25:44.47:0,44,602	0/1:13,1:15:17.26:17,0,295	0/1:39,4:43:69.15:69,0,790	0/0:33,1:36:14.85:0,15,533	0/0:44,1:45:30.29:0,30,734	0/1:15,0:15:70.04:70,0,116	0/1:12,9:22:99:102,0,357
chr10	108579212	.	AG	A	8069.08	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=11.465;DP=473;FS=7.648;HRun=4;HaplotypeScore=45.7666;InbreedingCoeff=0.9853;MQ=75.62;MQ0=0;MQRankSum=-1.222;QD=31.03;ReadPosRankSum=1.010;VQSLOD=4.7532;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:72.22:862,72,0	1/1:0,3:3:9.03:108,9,0	0/0:9,0:9:18.01:0,18,224	0/0:10,0:9:15.05:0,15,199	0/0:8,0:8:24.08:0,24,332	0/0:17,0:17:51.17:0,51,714	0/0:32,0:32:93.27:0,93,1248	1/1:3,18:21:54.16:646,54,0	0/0:10,0:10:27.09:0,27,377	0/0:10,0:10:24.07:0,24,321	0/0:8,0:8:24.06:0,24,312	1/1:1,20:21:60.18:720,60,0	0/0:10,0:10:24.08:0,24,324	0/0:16,0:16:45.08:0,45,606	0/0:9,0:9:24.08:0,24,334	0/0:16,0:16:48.15:0,48,656	1/1:2,22:24:63.13:738,63,0	1/1:2,32:34:90.28:1080,90,0	1/1:2,16:18:45.10:514,45,0	1/1:0,10:10:30.09:360,30,0	1/1:2,53:55:99:1727,144,0	0/0:8,0:8:24.08:0,24,323	0/0:9,0:9:27.09:0,27,372	0/0:33,0:33:99:0,99,1295	0/0:8,0:8:21.07:0,21,294	1/1:2,18:20:54.15:631,54,0	1/1:3,13:16:36.11:431,36,0	1/1:0,7:7:21.06:252,21,0
chr10	108579475	.	AGT	A	9633.34	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=11.253;DP=476;FS=23.556;HRun=0;HaplotypeScore=59.8609;InbreedingCoeff=0.9724;MQ=81.43;MQ0=0;MQRankSum=-2.156;QD=39.48;ReadPosRankSum=0.055;VQSLOD=3.7688;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:40:99:1545,105,0	1/1:0,3:3:6.02:88,6,0	0/0:13,0:13:36.12:0,36,600	0/0:15,0:15:41.31:0,41,630	0/0:5,0:5:15.05:0,15,281	0/0:22,0:22:66.23:0,66,1232	0/0:30,0:30:87.24:0,87,1584	1/1:0,31:31:93.26:1317,93,0	0/0:10,0:10:30.10:0,30,561	0/0:9,0:9:27.02:0,27,458	0/0:3,0:3:9.03:0,9,168	0/0:11,0:11:33.11:0,33,617	0/0:14,0:14:42.14:0,42,784	0/0:22,0:22:66.23:0,66,1223	0/0:11,0:11:33.11:0,33,597	0/0:11,0:11:33.11:0,33,599	1/1:0,31:31:75.25:1104,75,0	1/1:2,24:26:63.21:927,63,0	1/1:1,21:22:63.21:922,63,0	1/1:0,11:11:30.07:418,30,0	1/1:0,37:37:99:1546,105,0	0/0:6,0:6:18.06:0,18,336	0/0:10,0:10:27.09:0,27,501	0/0:31,0:31:90.26:0,90,1617	0/0:9,0:9:27.09:0,27,489	1/1:0,20:20:60.20:883,60,0	1/1:0,13:13:33.09:484,33,0	1/1:1,9:10:27.09:397,27,0
chr10	108579615	.	AGGGG	A	6459.26	PASS	AC=22;AF=0.423;AN=52;BaseQRankSum=0.378;DP=326;FS=1.768;HRun=11;HaplotypeScore=64.5194;InbreedingCoeff=0.8324;MQ=70.23;MQ0=1;MQRankSum=-2.269;QD=31.51;ReadPosRankSum=6.830;VQSLOD=2.9763;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,37:47:87.16:1332,87,0	1/1:0,3:3:9.03:141,9,0	0/0:9,0:4:6.02:0,6,83	0/0:15,0:13:29.24:0,29,478	0/0:4,0:4:2.21:0,2,74	0/0:7,0:7:9.03:0,9,209	0/0:18,0:19:36.11:0,36,712	1/1:4,26:30:75.05:1030,75,0	0/0:7,0:7:18.06:0,18,391	0/0:4,0:4:3.01:0,3,62	0/0:4,0:4:3.01:0,3,62	0/0:7,0:7:15.04:0,15,273	0/0:9,0:9:14.10:0,14,374	0/0:10,0:10:24.07:0,24,453	0/0:6,0:7:18.05:0,18,375	0/0:3,0:3:6.02:0,6,147	1/1:4,13:17:36.11:563,36,0	1/1:2,23:25:51.14:796,51,0	1/1:7,16:23:48.11:695,48,0	1/1:3,5:8:12.03:176,12,0	1/1:2,15:17:29.83:469,30,0	0/0:5,0:5:9.02:0,9,137	./.	0/0:8,0:10:17.96:0,18,305	./.	1/1:1,16:17:48.16:742,48,0	1/1:1,15:16:27.09:422,27,0	1/1:0,2:2:6.02:94,6,0
chr10	108579807	.	GCCCT	G	5293.65	PASS	AB=0.533;AC=21;AF=0.375;AN=56;BaseQRankSum=11.482;DP=408;FS=29.727;HRun=0;HaplotypeScore=71.7696;InbreedingCoeff=0.8865;MQ=73.22;MQ0=1;MQRankSum=-2.581;QD=30.96;ReadPosRankSum=4.529;VQSLOD=2.9526;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,14:27:45.15:764,45,0	1/1:2,2:4:6.49:103,6,0	0/0:12,0:9:15.05:0,15,338	0/0:26,0:24:42.06:0,42,843	0/0:13,0:13:33.11:0,33,716	0/0:15,0:15:39.13:0,39,962	0/0:24,0:24:60.21:0,60,1425	1/1:4,7:11:15.05:245,15,0	0/0:8,0:8:21.07:0,21,524	0/0:9,0:9:24.08:0,24,578	0/0:10,0:10:30.10:0,30,747	0/0:15,0:15:39.12:0,39,897	0/0:15,0:15:36.12:0,36,899	0/0:16,0:16:36.12:0,36,869	0/0:14,0:14:39.13:0,39,949	0/0:7,0:7:18.06:0,18,450	1/1:7,12:19:30.10:509,30,0	1/1:0,5:4:12.04:204,12,0	1/1:5,5:10:15.05:254,15,0	1/1:1,10:11:30.10:496,30,0	1/1:9,32:41:62.61:1037,63,0	0/0:10,0:10:30.10:0,30,719	0/0:15,0:15:39.13:0,39,948	0/0:18,0:18:39.13:0,39,917	0/0:10,0:10:24.08:0,24,596	0/1:2,14:16:29.82:664,0,30	1/1:1,18:19:51.17:865,51,0	1/1:3,5:8:9.03:153,9,0
chr10	108580001	.	TGG	T	9035.49	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.241;DP=533;FS=0.000;HRun=5;HaplotypeScore=79.5174;InbreedingCoeff=0.9518;MQ=88.69;MQ0=0;MQRankSum=-5.419;QD=39.28;ReadPosRankSum=0.690;VQSLOD=4.1757;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:99:1553,111,0	1/1:1,3:4:9.03:126,9,0	0/0:19,0:19:57.10:0,57,940	0/0:20,1:21:0.40:0,0,547	0/0:16,0:16:42.14:0,42,770	0/0:25,0:25:72.25:0,72,1315	0/0:31,0:31:87.28:0,87,1563	1/1:1,22:23:66.21:904,66,0	0/0:8,0:8:24.08:0,24,440	0/0:17,0:17:51.17:0,51,908	0/0:9,0:9:24.08:0,24,433	0/0:37,0:37:93.31:0,93,1663	0/0:13,0:13:39.13:0,39,708	0/0:21,0:21:63.22:0,63,1154	0/0:21,0:21:60.21:0,60,1100	0/0:15,0:15:45.15:0,45,825	1/1:0,33:33:96.32:1344,96,0	1/1:0,20:20:57.19:798,57,0	1/1:0,16:16:45.14:617,45,0	1/1:0,17:17:45.15:629,45,0	1/1:2,36:38:99:1512,108,0	0/0:6,0:6:18.06:0,18,330	0/0:8,0:8:24.08:0,24,440	0/0:26,0:26:72.25:0,72,1320	0/0:10,0:10:30.10:0,30,550	1/1:1,10:11:30.10:420,30,0	1/1:0,24:24:66.22:924,66,0	1/1:0,5:5:15.05:210,15,0
chr10	108580211	.	GGGTGCCTCGCTACATAGTAGCAAA	G	15118.25	PASS	AB=0.520;AC=21;AF=0.375;AN=56;BaseQRankSum=13.732;DP=498;FS=11.782;HRun=0;HaplotypeScore=309.2431;InbreedingCoeff=0.8728;MQ=97.89;MQ0=0;MQRankSum=-12.591;QD=136.20;ReadPosRankSum=5.668;VQSLOD=3.1611;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:48.16:3019,48,0	1/1:0,1:1:3.01:203,3,0	0/0:31,0:31:90.29:0,90,5976	0/0:23,0:23:66.06:0,66,4399	0/0:24,0:24:72.24:0,72,6535	0/0:27,0:27:81.28:0,81,7797	0/0:31,0:31:93.32:0,93,8704	1/1:0,5:5:15.03:687,15,0	0/0:22,0:22:66.23:0,66,5963	0/0:23,0:23:69.23:0,69,6967	0/0:19,0:19:57.20:0,57,5635	0/0:33,0:33:99:0,99,10272	0/0:22,0:22:66.20:0,66,6417	0/0:17,0:17:51.15:0,51,4515	0/0:14,0:14:42.14:0,42,4196	0/0:25,0:25:75.25:0,75,7999	1/1:0,8:8:18.06:1215,18,0	1/1:0,10:10:18.06:1216,18,0	1/1:0,6:6:18.06:1057,18,0	1/1:0,8:8:18.06:1213,18,0	1/1:0,7:7:9.03:608,9,0	0/0:16,0:16:48.16:0,48,5123	0/0:13,0:13:39.13:0,39,4083	0/0:26,0:26:78.26:0,78,7889	0/0:21,0:21:60.18:0,60,5923	0/1:1,12:13:99:2231,0,308	1/1:2,18:20:48.16:3064,48,0	1/1:1,7:8:9.03:608,9,0
chr10	108583591	.	CAGTTGCTTACT	C	1712.35	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.553;DP=729;FS=32.495;HRun=0;HaplotypeScore=230.3346;InbreedingCoeff=0.9670;MQ=83.32;MQ0=0;MQRankSum=-5.866;QD=30.58;ReadPosRankSum=1.705;VQSLOD=1.6418;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,19:32:36.12:1143,36,0	0/0:11,0:11:30.08:0,30,1393	0/0:33,0:33:78.20:0,78,3586	0/0:22,0:22:45.07:0,45,2090	0/0:32,0:32:87.75:0,88,4240	0/0:33,0:33:81.26:0,81,4184	0/0:36,0:36:96.32:0,96,4779	0/0:28,0:28:75.23:0,75,3329	0/0:34,0:33:81.26:0,81,4018	0/0:39,0:39:84.29:0,84,4322	0/0:20,0:20:54.19:0,54,2704	0/0:22,0:21:51.18:0,51,2734	0/0:23,0:22:63.22:0,63,3182	0/0:32,0:31:90.30:0,90,4696	0/0:30,0:29:72.25:0,72,3805	0/0:24,0:24:63.22:0,63,3000	1/1:9,6:15:12.04:402,12,0	1/1:5,4:9:9.03:301,9,0	0/0:24,0:24:51.15:0,51,2369	0/0:25,0:25:66.23:0,66,3506	0/0:44,0:44:99:0,120,6131	0/0:22,0:22:48.16:0,48,2551	0/0:27,0:27:75.26:0,75,3505	0/0:31,0:31:84.29:0,84,4324	0/0:20,0:20:54.16:0,54,2803	0/0:30,0:30:84.27:0,84,4058	0/0:18,0:17:42.14:0,42,2110	0/0:13,0:13:30.10:0,30,1632
chr10	108583673	.	T	TTG	1527.35	PASS	AB=0.933;AC=11;AF=0.196;AN=56;BaseQRankSum=9.490;DP=974;FS=36.633;HRun=0;HaplotypeScore=255.3278;InbreedingCoeff=0.3806;MQ=42.24;MQ0=36;MQRankSum=-7.943;QD=5.79;ReadPosRankSum=-1.008;VQSLOD=1.6271;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,14:24:26.67:404,27,0	0/0:22,0:22:28.18:0,28,320	0/0:57,0:11:8.52:0,9,59	0/0:66,0:12:6.02:0,6,68	0/0:26,0:27:17.93:0,18,196	0/0:32,0:32:53.54:0,54,530	0/0:37,0:38:71.90:0,72,780	0/0:22,0:20:36.41:0,36,456	0/0:28,0:29:47.19:0,47,520	0/1:50,0:48:25.78:26,0,537	0/0:30,0:30:25.80:0,26,260	1/1:10,1:32:32.98:313,33,0	0/0:23,0:23:31.88:0,32,499	0/0:35,0:32:38.67:0,39,544	0/0:30,0:30:49.37:0,49,457	0/0:30,0:29:53.23:0,53,542	0/1:10,10:18:2.51:374,0,3	1/1:5,11:16:0.37:481,0,0	0/0:30,0:25:22.43:0,22,296	0/1:32,0:32:8.67:9,0,174	0/0:81,0:79:89.56:0,90,958	0/0:44,0:44:24.27:0,24,539	0/0:31,0:31:6.20:0,6,311	0/0:35,0:36:73.30:0,73,816	0/1:48,0:47:27.25:27,0,559	0/1:40,0:37:48.17:48,0,349	0/0:19,0:17:13.17:0,13,286	0/0:19,0:19:16.82:0,17,220
chr10	108583702	.	G	GGT	3700.30	PASS	AB=0.848;AC=22;AF=0.393;AN=56;BaseQRankSum=1.185;DP=866;FS=1.728;HRun=0;HaplotypeScore=286.9920;InbreedingCoeff=0.3930;MQ=38.08;MQ0=37;MQRankSum=-3.947;QD=9.92;ReadPosRankSum=-1.645;VQSLOD=2.9252;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,4:23:4.17:20,4,0	1/1:7,11:17:29.69:488,30,0	0/0:71,0:11:1.69:0,2,137	0/0:65,0:8:7.43:0,7,97	0/0:25,0:25:1:0,1,90	0/1:27,0:26:12.25:12,0,233	0/0:34,0:33:56.76:0,57,621	1/1:22,5:23:22.94:352,23,0	0/0:29,0:29:19.06:0,19,299	0/0:49,0:47:31.21:0,31,711	0/0:21,0:22:12.07:0,12,139	1/1:17,9:23:26.07:372,26,0	0/0:24,0:22:0.58:0,1,289	0/0:30,0:29:23.97:0,24,369	0/0:25,0:25:15.83:0,16,181	0/0:22,0:22:47.65:0,48,535	1/1:13,3:15:5.60:251,6,0	1/1:7,4:11:15.01:219,15,0	1/1:18,4:23:13.27:355,13,0	0/1:18,6:25:43.75:162,0,44	1/1:28,33:60:14.36:729,14,0	0/1:45,0:46:2.71:3,0,337	0/0:19,0:22:16.39:0,16,191	0/0:32,0:32:49.07:0,49,606	0/0:38,0:38:1.19:0,1,314	0/1:26,14:40:96.50:655,0,96	0/1:9,2:9:41.62:42,0,43	0/1:10,4:14:34.90:41,0,35
chr10	108583730	.	GTA	G	581.66	PASS	AB=0.810;AC=13;AF=0.232;AN=56;BaseQRankSum=8.493;DP=541;FS=57.940;HRun=0;HaplotypeScore=187.1462;InbreedingCoeff=-0.2862;MQ=34.11;MQ0=6;MQRankSum=-4.367;QD=2.35;ReadPosRankSum=1.592;VQSLOD=1.0124;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:10:3.01:0,3,58	0/0:11,0:11:20.92:0,21,368	0/0:17,0:4:12.03:0,12,180	0/0:19,0:6:8.23:0,8,91	0/1:14,6:20:0:0,0,2	0/1:11,6:16:41.85:42,0,165	0/0:21,1:21:17.15:0,17,342	0/0:18,0:11:1.28:0,1,163	0/1:18,5:22:3.45:3,0,327	0/1:25,15:38:99:257,0,852	0/0:11,4:15:9.50:0,10,173	0/1:20,3:20:23.35:23,0,249	0/0:14,2:14:3.45:0,3,212	0/0:16,1:17:20.18:0,20,311	0/1:14,9:23:23.32:23,0,253	0/0:19,1:20:11.64:0,12,573	0/1:8,1:8:11.91:12,0,105	0/1:8,1:9:13.16:13,0,171	0/0:17,0:17:15.91:0,16,540	0/1:16,4:19:11.91:12,0,297	0/0:45,0:45:36.11:0,36,619	0/0:21,9:30:8.43:0,8,316	0/0:11,5:16:9:0,9,141	0/0:16,2:18:21.02:0,21,325	0/1:15,3:18:11.74:12,0,319	0/1:25,6:31:99:243,0,747	0/1:4,4:7:65.64:66,0,98	0/1:6,1:7:15.42:15,0,104
chr10	108584291	.	GTCT	G	159.12	PASS	AB=0.892;AC=12;AF=0.222;AN=54;BaseQRankSum=3.769;DP=452;FS=39.961;HRun=0;HaplotypeScore=142.5389;InbreedingCoeff=-0.1921;MQ=33.36;MQ0=25;MQRankSum=-5.100;QD=0.91;ReadPosRankSum=-0.790;VQSLOD=1.2724;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:9,0:7:2.98:0,3,102	0/0:37,0:2:6.02:0,6,90	0/0:30,0:2:5.51:0,6,83	0/1:13,0:15:9.29:9,0,94	0/1:16,0:17:23.15:23,0,150	0/0:22,0:20:6.79:0,7,191	0/0:19,0:8:13.97:0,14,158	0/1:20,0:17:28.78:29,0,150	0/1:17,1:19:58.73:59,0,248	0/1:12,1:13:27.77:28,0,50	0/0:7,0:6:2.84:0,3,15	0/0:13,1:13:29.26:0,29,353	0/0:22,0:19:8.38:0,8,322	0/1:13,1:13:1.37:1,0,137	0/0:24,2:25:24.62:0,25,427	0/0:3,0:2:3:0,3,28	0/0:2,0:2:3.01:0,3,32	0/1:8,0:8:3.67:4,0,96	0/0:9,2:11:9.19:0,9,105	0/0:20,0:16:2.51:0,3,198	0/1:23,1:22:5.17:5,0,276	1/1:13,1:13:5.52:70,6,0	0/0:28,0:27:17.58:0,18,298	0/0:14,1:16:8.49:0,8,152	0/1:18,0:16:19.99:20,0,237	0/0:4,1:5:0.40:0,0,87	0/1:2,1:4:42.16:42,0,47
chr10	108584324	.	TG	T	2619.98	PASS	AB=0.845;AC=21;AF=0.389;AN=54;BaseQRankSum=14.744;DP=756;FS=182.086;HRun=2;HaplotypeScore=206.7680;InbreedingCoeff=-0.6074;MQ=33.31;MQ0=89;MQRankSum=-10.677;QD=4.78;ReadPosRankSum=0.010;VQSLOD=-0.2162;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,1:5:1.62:0,2,18	0/1:12,1:9:24.83:145,0,25	0/0:24,0:4:8.06:0,8,96	./.	0/1:17,3:17:31.56:32,0,189	0/1:20,3:22:99:175,0,228	0/1:27,5:29:83.90:84,0,494	0/1:46,3:23:4.30:4,0,451	0/1:22,12:27:99:230,0,374	0/1:34,12:37:99:495,0,442	0/1:18,6:20:99:111,0,283	0/1:14,1:10:1.44:39,0,1	0/1:18,3:16:73.11:73,0,451	0/1:21,7:24:99:184,0,352	0/1:16,7:18:99:148,0,198	0/1:25,7:29:99:299,0,433	0/0:6,1:2:5.05:0,5,51	0/1:6,1:6:27.81:28,0,40	0/0:31,0:13:30.06:0,30,402	0/1:19,5:15:60.84:61,0,236	0/0:60,0:49:64.87:0,65,968	0/1:30,10:35:99:125,0,515	0/1:20,9:26:99:162,0,284	0/0:37,0:36:49.16:0,49,695	0/1:25,8:31:99:178,0,583	0/1:26,6:20:99:144,0,397	0/1:12,0:11:5.81:6,0,284	0/1:6,2:6:36.13:47,0,36
chr10	108584327	.	T	TGTG	324.02	PASS	AB=0.985;AC=13;AF=0.241;AN=54;BaseQRankSum=7.622;DP=788;FS=60.671;HRun=0;HaplotypeScore=254.7636;InbreedingCoeff=-0.2136;MQ=33.44;MQ0=86;MQRankSum=-6.195;QD=1.11;ReadPosRankSum=-2.155;VQSLOD=0.5282;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:5:1.35:3,1,0	0/1:13,0:9:51.27:51,0,75	0/0:26,0:4:5.04:0,5,95	./.	0/1:22,0:19:34.05:34,0,240	0/1:25,2:26:99:123,0,354	0/0:33,1:30:33.12:0,33,598	0/0:47,0:25:47.62:0,48,581	0/1:38,0:31:55.23:55,0,504	0/0:50,0:40:38.47:0,38,730	0/0:24,0:20:0.79:0,1,376	0/1:16,0:11:11.97:12,0,23	0/0:23,0:17:42.01:0,42,610	0/1:29,1:26:2.22:2,0,474	0/1:24,0:19:55.24:55,0,286	0/1:30,2:29:79.53:80,0,573	0/0:8,0:2:6.02:0,6,81	0/0:7,0:6:10.13:0,10,82	0/0:30,0:13:30.10:0,30,479	0/0:27,0:18:22.73:0,23,311	0/0:60,0:50:69.25:0,69,1064	0/1:40,0:36:26.82:27,0,690	0/1:28,0:25:11.31:11,0,371	0/0:40,0:39:60.73:0,61,891	0/0:35,0:32:32.88:0,33,748	0/0:35,0:21:11.71:0,12,583	0/0:12,0:11:24.07:0,24,370	0/1:8,0:6:9.25:9,0,74
chr10	108584349	.	A	ATG	2798.60	PASS	AB=0.940;AC=23;AF=0.411;AN=56;BaseQRankSum=3.442;DP=820;FS=1.015;HRun=0;HaplotypeScore=234.1736;InbreedingCoeff=0.4680;MQ=35.51;MQ0=46;MQRankSum=-7.703;QD=7.33;ReadPosRankSum=-0.254;VQSLOD=2.9004;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,2:4:3.01:48,3,0	1/1:10,1:9:1.98:73,2,0	0/0:40,0:10:18.05:0,18,207	0/0:47,0:1:3.01:0,3,37	0/0:23,0:21:10.74:0,11,239	0/1:28,0:26:5.01:5,0,191	0/0:38,0:35:61.95:0,62,734	0/1:44,4:29:15.30:319,0,15	0/1:38,0:34:1.07:1,0,456	0/1:47,0:43:29.14:29,0,441	0/0:22,0:19:10.69:0,11,267	1/1:16,0:13:0.85:12,1,0	0/0:23,0:19:11.23:0,11,371	0/0:35,0:34:32.32:0,32,467	0/0:24,0:20:15.93:0,16,185	0/0:27,0:27:30:0,30,368	0/1:5,2:5:36.13:76,0,36	1/1:7,0:6:2.72:13,3,0	1/1:25,3:17:21.07:327,21,0	1/1:20,5:21:12.37:278,12,0	1/1:38,31:61:9.21:1002,9,0	0/0:36,0:32:36.81:0,37,481	0/0:32,0:29:7.48:0,7,430	0/0:50,0:49:84.86:0,85,982	0/0:34,0:31:13.26:0,13,419	1/1:27,8:28:27.48:465,27,0	1/1:6,5:10:22.62:332,23,0	0/0:5,0:4:3.44:0,3,17
chr10	108584373	.	TGTGTATG	T	319.23	PASS	AB=0.977;AC=10;AF=0.179;AN=56;BaseQRankSum=10.480;DP=797;FS=51.684;HRun=0;HaplotypeScore=221.6210;InbreedingCoeff=-0.0766;MQ=38.12;MQ0=61;MQRankSum=-7.398;QD=2.19;ReadPosRankSum=-2.920;VQSLOD=0.4496;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:7:6.02:0,6,122	0/1:7,1:7:99:101,0,219	0/0:66,0:11:33.11:0,33,850	0/0:58,0:2:6.02:0,6,159	0/0:21,1:18:20.99:0,21,660	0/1:21,0:20:12.94:13,0,844	0/0:38,1:36:75.99:0,76,2618	0/0:48,0:34:62.95:0,63,2070	0/1:35,0:32:11.89:12,0,1931	0/0:34,1:29:2.17:0,2,1854	0/0:15,1:14:25.16:0,25,824	1/1:9,0:8:4.53:43,5,0	0/1:23,2:20:67.36:67,0,893	0/0:26,0:25:46.40:0,46,1523	0/0:17,0:16:7.66:0,8,858	0/0:24,0:24:8.02:0,8,1500	0/1:8,0:7:15.41:15,0,247	0/1:9,0:7:7.66:8,0,176	0/0:29,0:13:21.07:0,21,680	0/0:21,1:18:1.27:0,1,802	0/0:66,0:59:63.62:0,64,2251	0/1:24,0:22:85.10:85,0,815	0/0:29,2:29:31.45:0,31,1501	0/0:63,0:63:99:0,135,4892	0/0:29,1:27:22.67:0,23,1436	0/0:34,0:25:30.41:0,30,1353	0/0:13,0:13:18.43:0,18,728	0/1:7,0:5:99:112,0,123
chr10	108584377	.	TATG	T	585.46	PASS	AB=0.939;AC=14;AF=0.250;AN=56;BaseQRankSum=11.355;DP=758;FS=58.690;HRun=0;HaplotypeScore=160.7531;InbreedingCoeff=-0.1728;MQ=38.32;MQ0=67;MQRankSum=-8.290;QD=2.31;ReadPosRankSum=-3.756;VQSLOD=-0.5520;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:7:5.89:0,6,90	0/1:6,0:5:92.83:93,0,134	0/0:63,0:11:33.11:0,33,690	0/0:57,0:2:6.02:0,6,115	0/0:17,0:14:19.71:0,20,443	0/0:15,1:15:21.27:0,21,642	0/0:40,0:37:82.01:0,82,1905	0/0:50,0:34:63.09:0,63,1416	0/0:29,2:28:50.03:0,50,1290	0/1:32,0:24:74.93:75,0,1178	0/0:16,0:14:17.85:0,18,631	1/1:5,5:9:8.84:55,9,0	0/1:22,0:18:40.46:40,0,637	0/0:24,0:23:46.31:0,46,1035	0/0:18,0:16:16.10:0,16,588	0/1:23,1:24:12.04:12,0,1093	0/0:7,0:6:12:0,12,180	0/1:6,2:6:76.90:86,0,77	0/0:28,0:12:24.08:0,24,538	0/1:18,2:16:40.32:40,0,557	0/0:65,0:57:63.55:0,64,1507	0/1:20,1:19:99:152,0,525	0/1:26,1:25:11.93:12,0,950	0/0:61,0:61:99:0,142,3284	0/1:28,2:27:16.29:16,0,922	0/1:31,1:21:45.46:45,0,953	0/1:14,0:14:11.19:11,0,438	0/1:5,2:5:99:104,0,107
chr10	108586605	.	A	AC	432.06	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.373;DP=563;FS=4.673;HRun=7;HaplotypeScore=66.0001;InbreedingCoeff=0.8462;MQ=81.66;MQ0=0;MQRankSum=-2.775;QD=19.64;ReadPosRankSum=-1.489;VQSLOD=2.9892;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:81.11:0,81,776	0/0:3,0:3:9.01:0,9,87	0/0:17,0:16:23.32:0,23,306	0/0:15,0:16:19.49:0,19,206	0/0:17,0:17:45.06:0,45,429	0/0:20,0:20:45.07:0,45,435	0/0:28,0:28:72.11:0,72,695	0/0:17,0:17:30.04:0,30,289	0/0:13,0:13:30.05:0,30,289	0/0:16,0:16:36.03:0,36,337	0/0:14,0:14:30.03:0,30,283	1/1:10,12:22:22.17:525,22,0	0/0:21,0:21:48.06:0,48,459	0/0:26,0:26:60.06:0,60,571	0/0:25,0:25:63.09:0,63,608	0/0:17,0:17:42.05:0,42,405	0/0:29,0:29:78.12:0,78,753	0/0:31,0:31:84.13:0,84,810	0/0:12,0:12:26.96:0,27,250	0/0:11,0:11:30.03:0,30,284	0/0:53,0:53:99:0,132,1263	0/0:14,0:14:33.05:0,33,318	0/0:11,0:11:26.97:0,27,252	0/0:47,0:47:99:0,123,1184	0/0:13,0:13:36.05:0,36,347	0/0:15,0:15:33.04:0,33,314	0/0:15,0:14:39.06:0,39,376	0/0:4,0:4:6.01:0,6,58
chr10	108589427	.	AG	A	6636.27	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=17.437;DP=679;FS=7.576;HRun=1;HaplotypeScore=80.7478;InbreedingCoeff=0.9966;MQ=83.99;MQ0=0;MQRankSum=-3.257;QD=39.27;ReadPosRankSum=-0.566;VQSLOD=4.8911;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,148,2345	1/1:0,6:6:15.05:210,15,0	0/0:24,0:24:66.16:0,66,976	0/0:25,0:24:65.92:0,66,944	0/0:22,0:22:66.22:0,66,1043	0/0:23,0:23:69.24:0,69,1103	0/0:46,0:46:99:0,135,2116	1/1:0,29:29:87.27:1174,87,0	0/0:19,0:19:57.19:0,57,911	0/0:20,0:20:60.20:0,60,917	0/0:12,0:12:36.11:0,36,552	0/0:29,0:29:87.28:0,87,1351	0/0:19,0:19:57.16:0,57,881	0/0:27,0:27:78.23:0,78,1186	0/0:19,0:19:57.19:0,57,900	0/0:19,0:19:57.19:0,57,910	0/0:48,0:48:99:0,144,2244	0/0:31,0:31:93.32:0,93,1462	1/1:0,18:18:54.17:737,54,0	1/1:0,19:19:57.15:763,57,0	1/1:0,46:46:99:1738,126,0	0/0:14,0:14:42.13:0,42,648	0/0:18,0:18:54.17:0,54,829	0/0:30,0:30:87.25:0,87,1339	0/0:16,0:16:48.16:0,48,745	1/1:0,25:25:75.22:1009,75,0	1/1:0,19:19:51.17:713,51,0	1/1:0,7:7:21.07:293,21,0
chr10	108590115	.	C	CA	9347.71	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-15.579;DP=777;FS=2.448;HRun=1;HaplotypeScore=74.4549;InbreedingCoeff=0.9992;MQ=86.80;MQ0=0;MQRankSum=-2.729;QD=39.28;ReadPosRankSum=0.137;VQSLOD=5.3659;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:66:99:0,193,2473	1/1:0,14:14:39.12:584,39,0	0/0:26,0:26:78.16:0,78,956	0/0:27,0:28:62.50:0,63,936	0/0:18,0:18:54.18:0,54,701	0/0:22,0:22:66.21:0,66,857	0/0:31,0:31:87.28:0,87,1130	1/1:4,25:29:75.24:1105,75,0	0/0:24,0:24:69.21:0,69,882	0/0:23,0:23:57.18:0,57,729	0/0:14,0:14:33.11:0,33,429	1/1:0,32:32:93.32:1394,93,0	0/0:28,0:28:81.26:0,81,1050	0/0:33,0:33:98.99:0,99,1256	0/0:38,0:38:99:0,111,1385	0/0:31,0:31:93.26:0,93,1164	0/0:40,0:40:99:0,114,1462	0/0:22,0:22:66.21:0,66,856	1/1:1,32:33:96.31:1408,96,0	1/1:0,18:18:48.13:695,48,0	1/1:1,49:50:99:1843,123,0	0/0:19,0:19:54.16:0,54,686	0/0:17,0:17:48.13:0,48,607	0/0:34,0:34:99:0,99,1270	0/0:25,0:24:72.22:0,72,921	1/1:1,25:26:27.25:881,27,0	1/1:1,28:29:75.25:1124,75,0	1/1:0,7:7:21.07:315,21,0
chr10	108593120	.	TCTCTCTCTCTCTCTCTCTCTCTCTC	T	1023.60	PASS	AB=0.692;AC=1;AF=0.018;AN=56;BaseQRankSum=5.689;DP=628;FS=0.000;HRun=0;HaplotypeScore=282.6745;InbreedingCoeff=-0.0269;MQ=45.69;MQ0=45;MQRankSum=-5.247;QD=56.87;ReadPosRankSum=3.129;VQSLOD=2.0816;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:38:61.84:0,62,3085	0/0:13,0:13:21.54:0,22,535	0/0:18,0:1:3:0,3,26	0/0:20,0:3:6.02:0,6,76	0/0:16,0:15:27.09:0,27,745	0/0:19,0:19:41.63:0,42,1647	0/0:31,0:29:35.79:0,36,2134	0/0:31,0:29:86.97:0,87,2186	0/0:24,0:24:49.10:0,49,1954	0/0:33,0:32:95.50:0,96,3921	0/0:9,0:9:18.06:0,18,354	0/1:10,8:18:42.85:1098,0,43	0/0:17,0:17:37.94:0,38,1668	0/0:17,0:17:38.96:0,39,1577	0/0:14,0:14:24.08:0,24,981	0/0:20,0:18:45.15:0,45,1443	0/0:25,0:22:62.60:0,63,3068	0/0:30,0:28:33.11:0,33,2484	0/0:25,0:23:68.71:0,69,1745	0/0:13,0:13:28.03:0,28,561	0/0:33,0:30:27.09:0,27,575	0/0:15,0:15:24.08:0,24,880	0/0:17,0:17:18.53:0,19,554	0/0:53,0:52:99:0,117,5836	0/0:24,0:22:41.32:0,41,1204	0/0:22,0:20:56.67:0,57,1621	0/0:17,0:17:35.20:0,35,893	0/0:13,0:11:27.09:0,27,598
chr10	108594387	.	CT	C	6775.81	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.255;DP=559;FS=10.408;HRun=1;HaplotypeScore=61.9135;InbreedingCoeff=0.9889;MQ=84.79;MQ0=0;MQRankSum=-2.552;QD=39.86;ReadPosRankSum=-1.741;VQSLOD=4.1155;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.27:0,93,1458	1/1:0,13:13:39.13:545,39,0	0/0:17,0:17:51.11:0,51,736	0/0:20,0:20:53.91:0,54,780	0/0:17,0:17:51.17:0,51,815	0/0:20,0:20:57.18:0,57,886	0/0:29,0:29:87.27:0,87,1328	1/1:0,28:28:84.28:1174,84,0	0/0:13,0:13:39.12:0,39,596	0/0:19,0:19:54.18:0,54,864	0/0:6,0:6:18.06:0,18,288	0/0:16,0:16:45.15:0,45,719	0/0:15,0:15:45.15:0,45,719	0/0:14,0:14:42.14:0,42,665	0/0:19,0:19:57.19:0,57,906	0/0:17,0:17:48.15:0,48,744	0/0:28,0:28:84.26:0,84,1308	0/0:20,0:20:57.18:0,57,884	1/1:0,25:25:75.25:1047,75,0	1/1:0,20:20:57.19:789,57,0	1/1:0,31:31:77.61:1065,78,0	0/0:25,0:25:75.23:0,75,1151	0/0:20,0:20:60.20:0,60,947	0/0:25,0:25:75.26:0,75,1198	0/0:17,0:17:51.16:0,51,793	1/1:0,28:28:81.27:1130,81,0	1/1:2,20:22:66.21:900,66,0	1/1:0,3:3:9.03:126,9,0
chr10	108594437	.	ACCCC	A	3115.46	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=4.077;DP=381;FS=12.844;HRun=13;HaplotypeScore=81.0201;InbreedingCoeff=0.8722;MQ=76.43;MQ0=0;MQRankSum=-5.553;QD=25.54;ReadPosRankSum=5.792;VQSLOD=0.9254;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:13.25:0,13,140	0/0:4,0:6:11.86:0,12,129	0/0:17,0:16:32.97:0,33,467	0/0:15,0:15:16.84:0,17,368	0/0:6,0:10:5.93:0,6,55	0/0:10,0:10:6:0,6,75	0/0:10,0:11:10.53:0,11,96	1/1:5,9:15:23.98:331,24,0	0/0:12,0:14:23.87:0,24,220	0/0:8,0:8:14.98:0,15,138	0/0:4,0:4:6.01:0,6,78	0/0:15,0:15:27.04:0,27,472	0/0:7,0:7:15.04:0,15,216	0/0:4,0:4:9.01:0,9,102	0/0:8,0:9:18.04:0,18,256	0/0:6,0:8:17.87:0,18,174	0/0:22,0:25:52.68:0,53,601	0/0:15,0:22:47.94:0,48,560	1/1:8,12:20:47.63:588,48,0	1/1:6,9:15:17.97:263,18,0	1/1:16,11:27:38.97:547,39,0	0/0:9,0:15:14.99:0,15,149	0/0:7,0:7:5.75:0,6,52	0/0:14,0:17:29.47:0,29,304	0/0:8,0:11:17.84:0,18,189	1/1:6,13:19:45.09:658,45,0	1/1:5,17:21:54.14:790,54,0	1/1:0,4:4:9.03:132,9,0
chr10	108595923	.	A	AC	1071.22	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.199;DP=650;FS=0.739;HRun=2;HaplotypeScore=65.7211;InbreedingCoeff=0.9972;MQ=85.55;MQ0=0;MQRankSum=-2.658;QD=38.26;ReadPosRankSum=1.925;VQSLOD=4.3191;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.25:0,81,1002	0/0:14,0:14:42.09:0,42,502	0/0:25,0:25:66.07:0,66,757	0/0:16,0:16:38.47:0,38,436	0/0:19,0:19:51.08:0,51,613	0/0:21,0:21:57.16:0,57,693	0/0:24,0:24:66.21:0,66,818	0/0:50,0:50:99:0,135,1663	0/0:16,0:16:48.14:0,48,583	0/0:23,0:23:66.20:0,66,808	0/0:10,0:10:23.99:0,24,277	1/1:1,27:28:81.27:1166,81,0	0/0:20,0:20:60.17:0,60,729	0/0:22,0:22:57.18:0,57,706	0/0:33,0:33:90.27:0,90,1101	0/0:16,0:16:48.11:0,48,578	0/0:37,0:37:99:0,111,1361	0/0:29,0:29:81.17:0,81,983	0/0:20,0:20:53.99:0,54,619	0/0:29,0:29:75.19:0,75,912	0/0:35,0:35:99:0,99,1155	0/0:22,0:22:66.21:0,66,812	0/0:10,0:10:30.05:0,30,354	0/0:24,0:24:66.15:0,66,799	0/0:18,0:18:54.17:0,54,669	0/0:31,0:31:90.28:0,90,1105	0/0:15,0:15:45.14:0,45,558	0/0:13,0:13:39.12:0,39,483
chr10	108599156	.	CG	C	447.15	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.834;DP=452;FS=0.946;HRun=5;HaplotypeScore=46.1829;InbreedingCoeff=0.9201;MQ=73.33;MQ0=0;MQRankSum=-0.339;QD=23.53;ReadPosRankSum=0.940;VQSLOD=2.3894;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1408	0/0:7,0:7:21.05:0,21,270	0/0:7,0:6:8.50:0,8,108	0/0:10,0:10:20.38:0,20,171	0/0:12,0:12:36.10:0,36,460	0/0:15,0:15:39.13:0,39,533	0/0:21,0:21:57.16:0,57,747	0/0:16,0:17:48.02:0,48,583	0/0:11,0:11:30.10:0,30,410	0/0:21,0:21:60.18:0,60,787	0/0:9,0:9:21.05:0,21,268	1/1:0,19:19:48.14:542,48,0	0/0:15,0:15:42.13:0,42,553	0/0:16,0:16:48.14:0,48,625	0/0:21,0:21:60.17:0,60,773	0/0:11,0:11:33.09:0,33,420	0/0:35,0:35:99:0,99,1335	0/0:20,0:20:60.20:0,60,819	0/0:16,0:16:36.03:0,36,422	0/0:9,0:9:24.55:0,25,327	0/0:21,0:21:54.14:0,54,688	0/0:7,0:7:21.07:0,21,287	0/0:8,0:8:24.08:0,24,328	0/0:17,0:17:51.16:0,51,682	0/0:15,0:15:42.14:0,42,574	0/0:16,0:16:45.15:0,45,611	0/0:25,0:24:75.25:0,75,1024	0/0:12,0:12:33.09:0,33,432
chr10	108601788	.	TCATCCATCCATCTATC	T	626.63	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.994;DP=1051;FS=22.645;HRun=0;HaplotypeScore=448.7441;InbreedingCoeff=0.9945;MQ=54.95;MQ0=14;MQRankSum=-3.539;QD=52.22;ReadPosRankSum=-1.400;VQSLOD=2.0031;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:94.16:0,94,4976	1/1:7,5:12:30:721,30,0	0/0:30,0:12:20.82:0,21,179	0/0:43,0:20:41.84:0,42,501	0/0:25,0:25:63.08:0,63,2034	0/0:24,0:24:63.14:0,63,3159	0/0:41,0:41:99:0,102,4451	0/0:33,0:30:78.13:0,78,1264	0/0:43,0:43:99:0,111,6130	0/0:39,0:39:99:0,99,3369	0/0:17,0:17:39.05:0,39,1373	0/0:56,0:56:99:0,144,2707	0/0:34,0:34:90.24:0,90,4279	0/0:44,0:44:99:0,117,5453	0/0:68,0:68:99:0,180,8022	0/0:56,0:55:99:0,123,5363	0/0:26,0:26:56.92:0,57,2355	0/0:34,0:34:81.06:0,81,3304	0/0:25,0:23:29.26:0,29,795	0/0:32,0:32:78.20:0,78,2441	0/0:106,0:104:99:0,135,4011	0/0:40,0:40:90.14:0,90,3629	0/0:29,0:29:72.02:0,72,1581	0/0:41,0:41:99:0,102,4934	0/0:22,0:22:63.17:0,63,3659	0/0:39,0:39:99:0,108,3137	0/0:29,0:29:69.09:0,69,1986	0/0:16,0:16:48.10:0,48,1623
chr10	108601801	.	TATCC	T	4811.33	PASS	AB=0.891;AC=16;AF=0.286;AN=56;BaseQRankSum=12.389;DP=1044;FS=0.759;HRun=0;HaplotypeScore=202.0115;InbreedingCoeff=0.7580;MQ=53.43;MQ0=15;MQRankSum=-5.585;QD=13.51;ReadPosRankSum=2.028;VQSLOD=4.4226;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:87.30:0,87,1866	0/1:11,0:11:16.48:70,0,16	0/0:24,0:9:6.02:0,6,107	0/0:39,0:14:3.01:0,3,61	0/0:23,0:23:30.10:0,30,625	0/0:25,0:25:51.17:0,51,1140	0/0:43,0:43:45.71:0,46,1649	0/1:36,14:47:96.41:444,0,96	0/0:43,0:43:99:0,102,2309	0/0:44,0:44:69.23:0,69,1461	0/0:16,0:16:23.83:0,24,497	1/1:40,0:50:61.36:477,61,0	0/0:39,0:39:84.27:0,84,1717	0/0:42,0:42:87.29:0,87,1934	0/0:65,1:66:78.91:0,79,2706	0/0:42,0:41:69.24:0,69,1626	0/0:29,0:29:48.14:0,48,951	0/0:39,0:39:60.16:0,60,1262	1/1:22,4:23:20.60:305,21,0	1/1:11,22:31:55.21:719,55,0	1/1:57,41:96:39.06:845,39,0	0/0:31,1:32:3.69:0,4,1054	0/0:27,0:27:24.08:0,24,483	0/0:40,0:40:72.12:0,72,1665	0/0:24,0:24:16.80:0,17,1297	1/1:29,13:39:41.97:796,42,0	1/1:19,9:28:24.48:568,24,0	1/1:6,12:18:38.35:588,38,0
chr10	108601830	.	A	ATTG	1078.14	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=6.428;DP=1063;FS=3.728;HRun=0;HaplotypeScore=244.4457;InbreedingCoeff=0.6463;MQ=55.65;MQ0=12;MQRankSum=-7.125;QD=20.34;ReadPosRankSum=-3.744;VQSLOD=2.7923;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,129,2257	0/1:9,0:9:36.07:36,0,239	0/0:45,0:21:43.09:0,43,791	0/0:42,0:21:55.17:0,55,703	0/0:25,0:25:63.22:0,63,1092	0/0:28,0:28:81.28:0,81,1421	0/0:42,0:42:99:0,120,2038	0/0:42,0:41:61.75:0,62,1465	0/0:55,0:55:99:0,160,2761	0/0:39,0:39:99:0,105,1807	0/0:18,0:18:48.16:0,48,842	1/1:35,9:44:26.54:1148,27,0	0/0:47,0:47:99:0,138,2392	0/0:45,0:45:99:0,135,2351	0/0:55,0:54:99:0,166,2853	0/0:41,0:40:99:0,117,2059	0/0:34,0:34:86.93:0,87,1534	0/0:40,0:40:96.29:0,96,1660	0/0:32,0:28:55.36:0,55,840	0/0:34,0:31:61.46:0,61,680	0/0:78,0:77:96.84:0,97,1119	0/0:29,0:29:81.27:0,81,1393	0/0:21,0:21:60.21:0,60,1050	0/0:45,0:45:99:0,123,2075	0/0:31,0:31:87.29:0,87,1512	0/0:49,0:46:76.84:0,77,1306	0/0:22,0:22:37.21:0,37,470	0/0:17,0:15:27.33:0,27,392
chr10	108601836	.	CCAT	C	824.28	PASS	AB=0.958;AC=10;AF=0.179;AN=56;BaseQRankSum=15.340;DP=1039;FS=3.361;HRun=0;HaplotypeScore=235.5509;InbreedingCoeff=0.3369;MQ=56.07;MQ0=6;MQRankSum=-9.274;QD=3.18;ReadPosRankSum=0.377;VQSLOD=2.4257;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,150,2961	0/1:6,3:9:20.63:21,0,159	0/0:48,0:24:72.18:0,72,1000	0/0:39,0:24:59.83:0,60,890	0/0:22,0:22:60.19:0,60,1153	0/0:30,0:30:90.31:0,90,1802	0/0:42,0:42:99:0,122,2426	0/0:38,0:37:37.59:0,38,694	0/0:55,0:55:99:0,163,3328	0/0:37,0:37:99:0,111,2201	0/0:18,0:18:48.16:0,48,921	1/1:31,6:37:57.90:422,58,0	0/0:45,0:45:99:0,135,2755	0/0:47,0:47:99:0,141,2939	0/0:59,0:58:99:0,171,3707	0/0:45,0:44:99:0,132,2582	0/0:34,0:34:89.79:0,90,1766	0/0:39,0:39:99:0,99,1957	0/1:26,0:23:61.83:62,0,372	0/1:34,0:32:21.65:85,0,22	0/1:70,0:69:78.69:79,0,243	0/0:29,0:29:80.80:0,81,1657	0/0:20,0:20:60.20:0,60,1119	0/0:43,0:43:99:0,126,2524	0/0:32,0:32:90.45:0,90,1898	0/1:46,0:43:99:106,0,466	0/1:20,0:20:0.85:108,0,1	1/1:17,0:15:11.06:96,11,0
chr10	108601838	.	ATTG	A	1016.92	PASS	AB=0.902;AC=8;AF=0.143;AN=56;BaseQRankSum=9.704;DP=1036;FS=2.573;HRun=0;HaplotypeScore=235.1139;InbreedingCoeff=-0.1656;MQ=56.15;MQ0=4;MQRankSum=-9.936;QD=4.02;ReadPosRankSum=-2.153;VQSLOD=2.5756;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:58:99:0,135,3261	0/1:9,0:9:7.36:7,0,180	0/0:48,0:24:71.58:0,72,1461	0/0:42,1:27:65.71:0,66,1417	0/0:22,0:22:63.20:0,63,1377	0/0:31,0:31:93.32:0,93,2149	0/0:43,0:43:99:0,129,2800	0/1:36,0:36:27.94:28,0,1312	0/0:55,0:55:99:0,163,3773	0/0:37,0:37:99:0,108,2389	0/0:17,0:17:45.15:0,45,1059	0/0:34,0:34:8.91:0,9,548	0/0:44,0:44:99:0,132,3007	0/0:47,0:47:99:0,138,3184	0/0:58,0:57:99:0,169,3872	0/0:46,0:46:99:0,138,3201	0/0:36,0:36:87.43:0,87,2053	0/0:38,0:38:96.33:0,96,2227	0/1:21,2:22:99:146,0,694	0/1:30,4:32:99:101,0,453	0/1:64,6:70:99:105,0,956	0/0:28,0:28:84.29:0,84,1933	0/0:21,0:21:63.22:0,63,1483	0/0:43,0:43:99:0,126,2960	0/0:33,0:33:99:0,99,2277	0/1:33,10:40:99:460,0,1212	0/1:13,8:21:99:261,0,426	0/1:16,1:15:43.12:43,0,363
chr10	108601849	.	GTCCA	G	3413.68	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.033;DP=1024;FS=1.931;HRun=0;HaplotypeScore=247.5567;InbreedingCoeff=0.9182;MQ=56.04;MQ0=6;MQRankSum=1.667;QD=26.67;ReadPosRankSum=3.717;VQSLOD=3.0042;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,38:54:72.25:1204,72,0	0/0:13,0:13:14.88:0,15,136	0/0:48,0:21:30.05:0,30,463	0/0:47,0:29:26.44:0,26,663	0/0:26,0:26:54.17:0,54,1236	0/0:30,0:30:72.25:0,72,1730	0/0:35,0:35:78.27:0,78,1843	0/0:25,0:25:25.67:0,26,295	0/0:56,0:56:99:0,147,3300	0/0:36,0:36:90.31:0,90,2088	0/0:17,0:17:42.14:0,42,1002	0/0:19,0:47:66.09:0,66,1000	0/0:39,0:39:93.32:0,93,2246	0/0:37,0:37:87.26:0,87,2075	0/0:55,0:54:99:0,119,2759	0/0:46,0:46:99:0,120,2814	1/1:10,26:37:69.15:1106,69,0	1/1:6,31:37:66.23:1104,66,0	0/0:25,0:23:19.02:0,19,295	0/0:28,0:26:3.10:0,3,168	0/0:76,0:76:26.24:0,26,310	0/0:30,0:30:66.23:0,66,1458	0/0:22,0:22:51.17:0,51,1119	0/0:39,0:39:99:0,99,2399	0/0:29,0:29:72.25:0,72,1708	0/0:48,0:46:15.52:0,16,593	0/0:27,0:27:29.95:0,30,403	0/0:14,0:14:12.06:0,12,169
chr10	108605408	.	A	AC	294.59	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.720;DP=568;FS=0.000;HRun=8;HaplotypeScore=60.4906;InbreedingCoeff=0.9685;MQ=80.73;MQ0=0;MQRankSum=-2.579;QD=9.50;ReadPosRankSum=0.433;VQSLOD=1.3113;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.04:0,78,712	1/1:2,6:8:12.03:137,12,0	0/0:18,0:18:32.84:0,33,255	0/0:14,0:14:26.69:0,27,214	0/0:10,0:11:32.05:0,32,280	0/0:23,0:23:60.02:0,60,549	0/0:27,0:27:63.01:0,63,577	0/0:24,1:25:25.40:0,25,485	0/0:26,0:26:75.04:0,75,686	0/0:15,0:15:39.02:0,39,356	0/0:7,0:7:18.01:0,18,164	1/1:4,7:23:34.93:274,35,0	0/0:24,0:24:66.01:0,66,599	0/0:25,1:26:69.03:0,69,631	0/0:26,0:26:72.03:0,72,659	0/0:18,0:18:45.02:0,45,412	0/0:24,0:24:53.99:0,54,489	0/0:31,0:31:87.04:0,87,796	0/0:27,0:27:66.01:0,66,597	0/0:13,0:13:24.01:0,24,219	0/0:37,0:39:99:0,100,886	0/0:12,0:12:36.02:0,36,329	0/0:7,0:7:15:0,15,137	0/0:26,0:26:63.03:0,63,577	0/0:12,0:12:29.95:0,30,265	0/0:20,0:20:47.96:0,48,427	0/0:14,0:14:39.02:0,39,356	0/0:22,0:22:57.01:0,57,522
chr10	108607686	.	GGA	G	75.24	PASS	AB=0.861;AC=11;AF=0.196;AN=56;BaseQRankSum=5.983;DP=254;FS=5.089;HRun=0;HaplotypeScore=66.9930;InbreedingCoeff=-0.0439;MQ=86.57;MQ0=0;MQRankSum=-4.000;QD=0.99;ReadPosRankSum=1.545;VQSLOD=0.7690;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:30.10:0,30,607	0/1:2,1:3:36.97:37,0,96	0/0:22,0:19:45.09:0,45,783	0/0:16,0:11:13.54:0,14,336	0/0:5,0:5:5.82:0,6,121	0/0:5,0:5:15.05:0,15,304	0/0:10,1:11:27.09:0,27,512	0/0:14,0:14:42.10:0,42,729	0/1:7,2:9:61.71:62,0,363	0/0:9,0:9:27.09:0,27,501	0/0:5,2:7:9.50:0,9,154	0/0:14,0:14:42.10:0,42,765	0/1:9,1:10:14.61:15,0,329	0/0:5,0:5:15.05:0,15,304	0/1:12,1:13:6.28:6,0,577	0/1:7,0:7:0.39:0,0,285	0/0:9,0:9:24.08:0,24,420	0/0:5,0:5:15.05:0,15,304	0/1:6,1:7:23.90:24,0,284	0/1:5,1:6:0.15:0,0,172	0/0:12,0:12:28.25:0,28,423	0/0:9,0:9:24.04:0,24,383	0/0:9,2:11:24.88:0,25,467	0/0:8,0:8:24.08:0,24,445	0/1:5,4:9:6.04:6,0,215	0/1:10,1:11:10.88:11,0,576	0/0:4,0:4:12.04:0,12,243	1/1:0,1:1:3.01:43,3,0
chr10	108607711	.	TAGGAG	T	141.67	PASS	AB=0.906;AC=10;AF=0.179;AN=56;BaseQRankSum=6.288;DP=313;FS=11.124;HRun=0;HaplotypeScore=83.9848;InbreedingCoeff=-0.2196;MQ=69.61;MQ0=0;MQRankSum=-4.540;QD=1.35;ReadPosRankSum=1.106;VQSLOD=0.5891;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.13:0,39,1033	0/1:5,1:6:45.62:46,0,436	0/1:11,0:10:10.79:11,0,482	0/0:15,0:13:16.22:0,16,306	0/0:6,0:6:11.18:0,11,372	0/0:8,0:8:21.96:0,22,652	0/1:11,1:12:27.53:28,0,875	0/0:19,0:19:51.14:0,51,1364	0/1:10,1:11:9.53:10,0,742	0/0:9,0:9:27.09:0,27,820	0/0:9,0:9:12.94:0,13,408	0/0:19,0:19:54.12:0,54,1462	0/1:10,1:11:21.91:22,0,798	0/0:7,0:7:21.07:0,21,611	0/0:17,1:18:15.53:0,16,1533	0/1:8,1:9:36.32:36,0,712	0/0:12,0:12:36.12:0,36,1109	0/0:6,0:6:18.06:0,18,557	0/0:4,0:4:12.04:0,12,350	0/0:9,0:9:20.65:0,21,502	0/0:20,0:20:54.11:0,54,1645	0/0:8,0:8:18.05:0,18,490	0/1:16,1:17:21.59:22,0,1166	0/0:16,0:16:45.15:0,45,1310	0/1:10,1:11:36.05:36,0,639	0/1:13,1:14:20.54:21,0,1143	0/0:10,0:10:30.10:0,30,856	0/1:2,1:3:54.36:54,0,178
chr10	108608211	.	CT	C	4231.10	PASS	AB=0.849;AC=20;AF=0.357;AN=56;BaseQRankSum=6.467;DP=594;FS=0.719;HRun=11;HaplotypeScore=70.1263;InbreedingCoeff=0.8241;MQ=66.15;MQ0=0;MQRankSum=-0.699;QD=17.34;ReadPosRankSum=-1.438;VQSLOD=5.1737;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,2:32:23.14:0,23,605	1/1:3,9:12:26.96:222,27,0	0/1:7,2:10:50.49:65,0,50	0/0:7,0:6:4.56:0,5,35	0/0:24,2:27:37.65:0,38,624	0/0:17,1:20:29.09:0,29,457	0/0:17,0:17:39.02:0,39,396	1/1:6,17:24:17.97:343,18,0	0/0:13,3:16:8.45:0,8,295	0/0:24,0:24:57.14:0,57,602	0/0:22,0:22:55.01:0,55,570	1/1:2,20:23:55.96:449,56,0	0/0:16,0:18:44.95:0,45,462	0/0:19,0:19:48.10:0,48,503	0/0:16,0:16:33.08:0,33,352	0/1:11,1:13:3.76:4,0,153	0/0:27,1:28:53.55:0,54,775	0/0:19,0:19:51.13:0,51,544	1/1:2,21:24:61.95:498,62,0	1/1:5,19:24:59.91:492,60,0	1/1:6,18:24:53.91:440,54,0	0/0:19,1:21:17.29:0,17,367	0/0:20,2:22:7.85:0,8,488	0/0:18,0:18:51.09:0,51,531	0/0:22,1:24:34.56:0,35,578	1/1:6,34:41:39.89:727,40,0	1/1:2,32:35:91.93:745,92,0	1/1:4,10:14:29.95:246,30,0
chr10	108609744	.	C	CAT	1490.25	PASS	AB=1.000;AC=32;AF=0.593;AN=54;BaseQRankSum=-0.032;DP=235;FS=2.021;HRun=0;HaplotypeScore=46.1887;InbreedingCoeff=0.3042;MQ=68.31;MQ0=0;MQRankSum=-2.469;QD=8.37;ReadPosRankSum=2.141;VQSLOD=3.0815;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:8:0:1,0,0	1/1:2,0:2:2.91:19,3,0	0/0:7,0:5:10.99:0,11,99	0/0:7,0:4:5.62:0,6,74	0/1:8,0:8:0:0,0,0	0/0:6,0:6:0:0,0,0	0/1:9,0:9:0.01:0,0,0	1/1:9,0:9:23.88:212,24,0	0/0:8,0:8:3:0,3,25	0/0:10,0:10:23.65:0,24,157	0/0:3,0:3:2.59:0,3,24	0/1:10,0:10:14.98:38,0,15	0/1:7,0:7:10.03:13,0,10	1/1:13,0:13:5.95:41,6,0	./.	0/1:11,0:11:11.75:12,0,13	1/1:13,0:13:5.71:43,6,0	1/1:7,0:7:11.84:79,12,0	1/1:4,0:4:11.88:84,12,0	1/1:5,1:6:12.04:195,12,0	1/1:17,0:17:29.75:353,30,0	0/1:10,0:10:9.49:9,0,40	0/1:8,0:8:16.18:16,0,17	1/1:6,0:6:0.47:1,0,0	1/1:8,0:8:2.94:20,3,0	1/1:14,3:17:47.37:404,47,0	0/0:8,0:8:0:0,0,0	1/1:5,0:5:8.94:98,9,0
chr10	108612319	.	C	CA	2772.50	PASS	AB=0.938;AC=23;AF=0.411;AN=56;BaseQRankSum=-1.344;DP=536;FS=18.450;HRun=12;HaplotypeScore=66.0757;InbreedingCoeff=0.8543;MQ=70.61;MQ0=1;MQRankSum=-0.219;QD=11.41;ReadPosRankSum=-0.857;VQSLOD=1.1878;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,1:36:36.93:186,37,0	0/0:1,0:2:2.03:0,2,6	0/0:21,0:14:13.64:0,14,97	0/1:13,1:15:13.90:14,0,38	0/0:22,0:23:54.98:0,55,398	0/0:24,0:25:70.63:0,71,507	0/0:23,0:23:56.47:0,56,405	1/1:14,17:31:47.49:424,47,0	0/0:15,0:15:26.73:0,27,192	0/0:22,0:22:38.22:0,38,282	0/0:19,1:21:20.53:0,21,303	1/1:2,10:12:12.91:119,13,0	0/0:19,0:19:41.16:0,41,283	0/0:8,0:10:12.91:0,13,73	0/0:19,0:19:12.45:0,12,246	0/0:19,0:20:47.64:0,48,334	1/1:6,0:27:31.21:156,31,0	1/1:5,1:21:26.98:147,27,0	1/1:5,11:16:33.02:307,33,0	1/1:6,12:19:47.86:438,48,0	1/1:3,12:17:0.92:306,1,0	0/0:25,0:25:50.61:0,51,372	0/0:20,1:22:17.55:0,18,283	0/0:11,0:11:26.84:0,27,197	0/0:14,0:14:26.80:0,27,197	1/1:8,17:26:29:425,29,0	1/1:2,13:15:27.04:263,27,0	1/1:1,7:8:21.03:204,21,0
chr10	108612584	.	TA	T	530.26	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.925;DP=694;FS=7.000;HRun=10;HaplotypeScore=65.7355;InbreedingCoeff=0.9345;MQ=75.65;MQ0=0;MQRankSum=-1.494;QD=20.39;ReadPosRankSum=0.193;VQSLOD=4.5612;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,1:43:88.22:0,88,1189	0/0:7,0:7:18.05:0,18,199	0/0:15,0:15:18.04:0,18,194	0/0:14,0:14:10.02:0,10,325	0/0:27,0:27:66.13:0,66,709	0/0:20,0:21:56.98:0,57,604	0/0:20,0:20:45.11:0,45,488	0/0:28,1:29:46.12:0,46,727	0/0:26,0:26:78.21:0,78,863	0/0:23,0:23:48.13:0,48,531	0/0:27,1:29:36.95:0,37,611	1/1:2,24:26:71.98:625,72,0	0/0:21,0:21:57.15:0,57,631	0/0:29,0:29:69.19:0,69,763	0/0:33,1:34:73.21:0,73,1035	0/0:15,0:15:36.07:0,36,380	0/0:32,2:35:70.01:0,70,972	0/0:21,0:21:51.14:0,51,564	0/0:19,0:19:39.11:0,39,431	0/0:25,0:25:66.14:0,66,700	0/0:31,0:31:75.19:0,75,822	0/0:23,0:23:63.16:0,63,689	0/0:19,1:20:19.07:0,19,439	0/0:39,0:39:99:0,108,1195	0/0:23,0:23:60.12:0,60,639	0/0:40,0:40:99:0,102,1115	0/0:20,1:20:37.13:0,37,638	0/0:18,0:18:48.04:0,48,496
chr10	108613404	.	C	CG	243.65	PASS	AB=0.524;AC=1;AF=0.018;AN=56;BaseQRankSum=-3.081;DP=613;FS=1.281;HRun=2;HaplotypeScore=62.4848;InbreedingCoeff=0.1407;MQ=74.41;MQ0=1;MQRankSum=-2.456;QD=22.15;ReadPosRankSum=-0.607;VQSLOD=3.2606;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.24:0,78,964	0/1:1,10:11:10.08:318,0,10	0/0:13,0:12:29.67:0,30,320	0/0:19,0:17:31.99:0,32,382	0/0:16,0:16:45.14:0,45,552	0/0:15,0:15:42.12:0,42,508	0/0:28,0:28:81.22:0,81,975	0/0:27,0:27:57.16:0,57,693	0/0:20,0:20:60.17:0,60,730	0/0:26,0:26:69.22:0,69,853	0/0:8,0:8:15.05:0,15,186	0/0:28,0:28:78.24:0,78,966	0/0:18,0:18:51.16:0,51,631	0/0:31,0:31:87.26:0,87,1064	0/0:39,0:39:99:0,111,1363	0/0:32,0:32:84.26:0,84,1040	0/0:32,0:32:87.25:0,87,1061	0/0:26,0:26:75.23:0,75,926	0/0:17,0:17:45.13:0,45,546	0/0:12,0:12:33.10:0,33,409	0/0:50,0:50:99:0,144,1751	0/0:14,0:14:36.11:0,36,445	0/0:13,0:13:33.10:0,33,408	0/0:33,0:33:99:0,99,1210	0/0:12,0:12:30.09:0,30,369	0/0:16,0:16:45.14:0,45,557	0/0:22,0:20:66.21:0,66,817	0/0:7,0:7:21.06:0,21,255
chr10	108613876	.	T	TAAAC	11952.17	PASS	AB=0.611;AC=20;AF=0.357;AN=56;BaseQRankSum=-13.624;DP=789;FS=1.079;HRun=0;HaplotypeScore=114.4464;InbreedingCoeff=0.8466;MQ=74.29;MQ0=2;MQRankSum=-0.360;QD=39.06;ReadPosRankSum=-2.024;VQSLOD=4.3644;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,36:47:84.29:2048,84,0	1/1:0,6:6:15.05:326,15,0	0/0:40,0:34:39.08:0,39,552	0/0:31,0:26:29.12:0,29,440	0/0:30,0:29:69.24:0,69,1124	0/0:18,0:18:48.15:0,48,757	0/0:23,0:23:45.15:0,45,687	1/1:34,0:33:51.15:862,51,0	0/0:37,0:37:78.25:0,78,1238	0/0:26,0:26:57.19:0,57,916	0/0:19,0:19:42.13:0,42,660	0/0:30,0:30:75.25:0,75,1171	0/0:21,0:21:36.12:0,36,571	0/0:26,0:26:60.19:0,60,934	0/0:34,0:34:84.29:0,84,1351	0/0:23,0:23:51.17:0,51,824	1/1:10,25:37:42.14:1017,42,0	1/1:10,22:32:56.22:1323,56,0	0/1:12,11:24:13.06:597,0,13	1/1:9,19:30:62.15:1281,62,0	0/1:5,16:22:19.52:524,0,20	0/0:29,0:29:69.23:0,69,1088	0/0:32,0:32:75.26:0,75,1198	0/0:36,0:36:75.25:0,75,1221	0/0:27,0:27:57.18:0,57,892	1/1:5,26:32:84.29:1925,84,0	1/1:10,16:26:48.16:1101,48,0	1/1:2,13:15:39.13:948,39,0
chr10	108614329	.	AATAT	A	575.08	PASS	AB=0.907;AC=15;AF=0.375;AN=40;BaseQRankSum=2.796;DP=240;FS=0.000;HRun=0;HaplotypeScore=47.5728;InbreedingCoeff=0.2902;MQ=70.70;MQ0=4;MQRankSum=0.088;QD=4.42;ReadPosRankSum=-0.857;VQSLOD=1.2628;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:15:14.79:190,15,0	1/1:5,0:6:6:52,6,0	./.	./.	0/0:7,1:8:9.03:0,9,170	0/0:11,0:11:12.51:0,13,216	0/0:7,0:7:0.94:0,1,1	0/1:27,0:42:66.07:176,0,66	./.	0/0:5,0:5:6.02:0,6,127	0/0:7,0:7:3.01:0,3,50	./.	0/0:3,0:3:0:0,0,0	0/0:2,0:2:3.48:0,3,38	0/0:4,0:4:6.02:0,6,100	1/1:6,0:5:3.01:46,3,0	1/1:5,13:18:3.01:49,3,0	0/0:3,10:14:0:0,0,0	0/1:8,0:7:40.86:81,0,41	./.	0/0:3,0:2:0:0,0,0	./.	./.	./.	0/0:10,0:10:15.05:0,15,262	1/1:6,0:6:4.68:64,5,0	1/1:9,0:9:2.84:14,3,0	0/1:18,0:18:28.92:29,0,35
chr10	108614354	.	ATATGTGTGTGTGTGTGTGTGTGTG	A	1317.14	PASS	AB=0.702;AC=9;AF=0.196;AN=46;BaseQRankSum=2.203;DP=197;FS=1.745;HRun=0;HaplotypeScore=95.9157;InbreedingCoeff=0.2827;MQ=53.65;MQ0=9;MQRankSum=2.029;QD=21.24;ReadPosRankSum=1.255;VQSLOD=1.9972;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:14.75:0,15,2311	0/0:3,0:3:0.59:0,1,235	./.	./.	0/0:5,0:5:9:0,9,385	0/0:10,0:9:15.51:0,16,1136	0/0:6,0:5:8.15:0,8,573	1/1:26,0:24:1.13:355,1,0	0/0:4,0:4:9.03:0,9,846	0/0:4,0:4:12.04:0,12,921	0/0:6,0:6:12.04:0,12,1094	0/0:3,0:3:0:0,0,0	0/0:4,0:3:6.49:0,6,546	0/1:4,0:4:17.65:18,0,283	0/0:6,0:6:18.03:0,18,1126	0/0:5,0:3:12.04:0,12,1067	0/0:22,0:22:24.08:0,24,2305	0/0:15,0:15:18.06:0,18,1707	0/1:2,5:6:9.07:256,0,9	./.	0/0:3,0:2:0:0,0,0	./.	./.	0/0:2,0:2:3.01:0,3,285	0/0:11,0:10:24.04:0,24,1600	1/1:4,1:5:3.07:228,3,0	1/1:1,7:8:3.01:191,3,0	0/1:1,11:12:14.95:388,0,15
chr10	108614608	.	GATAATAATAATAATA	G	2095.03	PASS	AC=16;AF=0.381;AN=42;BaseQRankSum=2.096;DP=205;FS=4.513;HRun=0;HaplotypeScore=87.1898;InbreedingCoeff=0.6562;MQ=61.15;MQ0=2;MQRankSum=0.108;QD=26.52;ReadPosRankSum=-3.121;VQSLOD=1.3066;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:15:14.75:0,15,119	1/1:3,0:3:3.01:101,3,0	./.	./.	0/0:2,0:4:12.04:0,12,695	0/0:3,0:7:15.05:0,15,855	0/0:1,0:1:3.01:0,3,48	1/1:19,12:31:35.91:668,36,0	0/0:3,0:5:6.02:0,6,329	0/0:0,0:2:6.02:0,6,340	./.	0/0:1,0:4:3.01:0,3,76	./.	0/0:4,0:5:3.01:0,3,197	0/0:9,0:9:12.04:0,12,859	0/0:2,0:5:6.02:0,6,236	0/0:12,0:26:29.97:0,30,606	0/0:8,0:19:27.09:0,27,649	1/1:5,5:10:18.02:560,18,0	1/1:0,2:2:3.01:102,3,0	1/1:1,3:4:3.01:112,3,0	./.	./.	./.	0/0:3,0:8:15.05:0,15,864	1/1:4,6:9:12.03:354,12,0	1/1:6,6:12:6.02:225,6,0	1/1:4,3:7:3.01:125,3,0
chr10	108615214	.	TTTTG	T	5230.45	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.809;DP=602;FS=2.322;HRun=0;HaplotypeScore=108.5213;InbreedingCoeff=0.9959;MQ=76.38;MQ0=3;MQRankSum=-2.334;QD=34.64;ReadPosRankSum=-0.505;VQSLOD=4.4991;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:81.26:0,81,1830	0/0:11,0:11:33.09:0,33,731	0/0:27,0:21:24:0,24,410	0/0:25,1:22:17.64:0,18,449	0/0:26,0:26:66.23:0,66,1610	0/0:18,0:18:48.15:0,48,1068	0/0:20,0:20:51.16:0,51,1088	1/1:10,29:39:84.23:1304,84,0	0/0:17,0:17:39.13:0,39,891	0/0:28,0:28:72.25:0,72,1597	0/0:20,0:19:39.12:0,39,881	0/0:26,0:26:66.22:0,66,1522	0/0:21,0:21:48.16:0,48,1169	0/0:15,0:15:24.08:0,24,536	0/0:22,0:22:48.15:0,48,1086	0/0:20,0:20:57.19:0,57,1334	0/0:23,0:23:63.20:0,63,1473	0/0:25,0:25:47.24:0,47,1098	1/1:8,12:20:33.11:515,33,0	1/1:2,19:21:51.02:734,51,0	1/1:3,14:17:33.11:554,33,0	0/0:23,0:23:51.11:0,51,1048	0/0:13,0:13:30.02:0,30,656	0/0:16,0:16:42.14:0,42,1005	0/0:21,0:21:60.19:0,60,1391	1/1:5,20:25:60.18:962,60,0	1/1:3,19:22:51.46:858,51,0	1/1:1,6:7:18.06:302,18,0
chr10	108616030	.	A	AGC	14401.88	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-18.112;DP=737;FS=2.355;HRun=0;HaplotypeScore=82.2122;InbreedingCoeff=0.9953;MQ=81.20;MQ0=0;MQRankSum=-1.418;QD=47.06;ReadPosRankSum=1.087;VQSLOD=6.2090;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,44:48:99:2050,114,0	0/0:13,0:13:36.12:0,36,502	0/0:15,0:15:38.28:0,38,458	0/0:25,0:23:66.03:0,66,752	0/0:17,0:17:45.14:0,45,613	0/0:18,0:18:48.16:0,48,672	0/0:25,0:25:60.18:0,60,810	1/1:5,19:26:66.20:1105,66,0	0/0:31,0:31:87.27:0,87,1199	0/0:28,0:28:81.25:0,81,1102	0/0:12,0:12:30.10:0,30,420	0/0:41,0:41:99:0,120,1661	0/0:20,0:20:57.19:0,57,797	0/0:25,0:25:75.24:0,75,1031	0/0:23,0:23:60.20:0,60,838	0/0:30,0:30:81.26:0,81,1116	1/1:2,30:33:87.30:1565,87,0	1/1:0,35:35:99:1822,102,0	1/1:3,21:24:69.23:1209,69,0	1/1:0,13:13:39.13:695,39,0	1/1:4,51:57:99:2532,141,0	0/0:26,0:26:75.25:0,75,1049	0/0:18,0:18:51.15:0,51,684	0/0:41,0:41:99:0,114,1571	0/0:23,0:23:66.22:0,66,922	1/1:3,34:38:99:1806,102,0	1/1:0,25:27:78.27:1401,78,0	1/1:0,4:5:12.04:216,12,0
chr10	108616080	.	T	TC	252.10	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.435;DP=715;FS=0.000;HRun=2;HaplotypeScore=93.1390;InbreedingCoeff=0.9869;MQ=77.55;MQ0=0;MQRankSum=-2.241;QD=25.21;ReadPosRankSum=-0.979;VQSLOD=3.0037;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,117,1450	1/1:0,10:10:24.08:345,24,0	0/0:19,0:19:53.70:0,54,568	0/0:12,0:12:24.07:0,24,288	0/0:16,0:16:48.15:0,48,594	0/0:17,0:17:48.15:0,48,595	0/0:35,0:35:99:0,102,1264	0/0:14,0:14:42.13:0,42,521	0/0:30,0:30:90.27:0,90,1100	0/0:30,0:30:81.20:0,81,967	0/0:9,0:9:21.07:0,21,260	0/0:44,0:44:99:0,126,1544	0/0:23,0:23:69.20:0,69,841	0/0:26,0:26:66.21:0,66,817	0/0:16,0:16:48.14:0,48,583	0/0:28,0:28:81.25:0,81,1004	0/0:37,0:37:96.30:0,96,1189	0/0:43,0:43:99:0,123,1525	0/0:28,0:28:75.21:0,75,915	0/0:10,0:10:27.08:0,27,334	0/0:52,0:52:99:0,126,1549	0/0:19,0:19:57.12:0,57,677	0/0:16,0:16:45.14:0,45,558	0/0:34,0:34:96.30:0,96,1187	0/0:19,0:19:57.18:0,57,707	0/0:39,0:39:99:0,105,1301	0/0:37,0:37:99:0,102,1237	0/0:9,0:9:21.07:0,21,260
chr10	108619017	.	C	CTGTGTG	946.59	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.853;DP=995;FS=14.291;HRun=0;HaplotypeScore=203.6873;InbreedingCoeff=0.9998;MQ=64.14;MQ0=7;MQRankSum=-5.108;QD=47.33;ReadPosRankSum=-3.186;VQSLOD=1.8907;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,141,3070	1/1:5,14:20:35.92:1041,36,0	0/0:44,0:27:55.42:0,55,1069	0/0:50,0:33:42.04:0,42,869	0/0:29,0:29:66.21:0,66,1422	0/0:24,0:24:66.23:0,66,1464	0/0:42,0:42:99:0,99,2196	0/0:27,0:27:60.19:0,60,1238	0/0:39,0:39:99:0,99,2112	0/0:37,0:37:90.31:0,90,1971	0/0:27,0:27:81.28:0,81,1796	0/0:49,0:49:99:0,126,2795	0/0:39,0:39:99:0,102,2245	0/0:36,0:36:96.33:0,96,2129	0/0:41,0:40:99:0,111,2372	0/0:37,0:37:99:0,102,2261	0/0:24,0:24:66.23:0,66,1461	0/0:22,0:22:60.21:0,60,1330	0/0:20,0:20:42.13:0,42,859	0/0:34,0:34:84.26:0,84,1763	0/0:81,0:81:99:0,202,4392	0/0:31,0:31:75.24:0,75,1621	0/0:28,0:28:81.22:0,81,1688	0/0:36,0:36:93.27:0,93,1987	0/0:32,0:32:90.31:0,90,1997	0/0:40,0:40:99:0,111,2412	0/0:33,0:33:93.31:0,93,2014	0/0:21,0:21:57.20:0,57,1242
chr10	108619329	.	CA	C	159.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.585;DP=841;FS=1.435;HRun=4;HaplotypeScore=112.5290;InbreedingCoeff=0.9957;MQ=66.98;MQ0=1;MQRankSum=-0.559;QD=14.50;ReadPosRankSum=-1.279;VQSLOD=2.4189;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,108,1479	1/1:2,9:11:21.06:252,21,0	0/0:32,0:22:60.18:0,60,808	0/0:25,0:18:45.06:0,45,547	0/0:30,0:30:84.27:0,84,1157	0/0:30,0:30:84.28:0,84,1174	0/0:33,0:33:96.26:0,96,1266	0/0:33,0:33:80.85:0,81,1119	0/0:31,0:31:84.27:0,84,1153	0/0:31,0:31:87.25:0,87,1138	0/0:23,0:23:69.17:0,69,911	0/0:30,0:30:75.24:0,75,1030	0/0:35,0:35:99:0,99,1355	0/0:26,0:26:66.19:0,66,877	0/0:46,0:46:99:0,126,1746	0/0:28,0:28:81.26:0,81,1115	0/0:57,0:57:99:0,147,2013	0/0:30,0:30:81.27:0,81,1130	0/0:19,0:19:54.17:0,54,742	0/0:29,0:29:84.27:0,84,1159	0/0:41,0:41:99:0,99,1385	0/0:15,0:15:39.13:0,39,546	0/0:26,0:26:69.21:0,69,934	0/0:44,0:44:99:0,129,1750	0/0:32,0:32:93.23:0,93,1259	0/0:29,0:28:84.28:0,84,1176	0/0:22,0:22:60.18:0,60,812	0/0:13,0:13:36.08:0,36,482
chr10	108619336	.	CTG	C	6249.76	PASS	AB=0.917;AC=26;AF=0.464;AN=56;BaseQRankSum=11.221;DP=868;FS=11.221;HRun=0;HaplotypeScore=109.1656;InbreedingCoeff=0.5098;MQ=65.77;MQ0=4;MQRankSum=0.426;QD=12.35;ReadPosRankSum=1.844;VQSLOD=4.2320;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,28:44:69.21:818,69,0	0/0:12,0:12:6.02:0,6,81	0/0:36,1:23:39.09:0,39,534	0/0:35,0:21:26.88:0,27,355	0/1:31,4:35:66.38:66,0,915	0/1:26,4:30:7.91:8,0,831	0/0:34,1:35:36.70:0,37,1034	1/1:15,16:32:33.55:548,34,0	0/1:24,2:26:16.42:16,0,701	0/0:33,2:35:1.11:0,1,944	0/0:23,2:25:21.64:0,22,820	0/0:7,0:32:56.99:0,57,500	0/0:30,3:33:4.02:0,4,982	0/0:22,3:25:21.64:0,22,820	0/0:41,2:43:60.75:0,61,1386	0/1:24,2:26:16.94:17,0,697	1/1:16,36:55:95.62:1047,96,0	1/1:9,18:28:50.82:561,51,0	1/1:8,11:20:29.90:314,30,0	1/1:11,18:30:54:617,54,0	1/1:19,20:39:48.14:569,48,0	0/0:18,1:19:9.59:0,10,607	0/1:25,2:27:19.93:20,0,649	0/1:38,3:42:10.39:10,0,1253	0/0:29,2:31:10.16:0,10,1118	1/1:11,20:31:56.99:642,57,0	1/1:3,21:24:57.17:676,57,0	1/1:5,10:15:27.08:319,27,0
chr10	108620148	.	AT	A	4557.01	PASS	AB=0.967;AC=25;AF=0.446;AN=56;BaseQRankSum=11.406;DP=548;FS=13.216;HRun=11;HaplotypeScore=54.9671;InbreedingCoeff=0.8353;MQ=71.84;MQ0=0;MQRankSum=-0.584;QD=16.39;ReadPosRankSum=-0.309;VQSLOD=4.4397;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,32:43:80.87:665,81,0	1/1:2,13:15:38.86:312,39,0	0/1:11,0:10:6.48:6,0,115	0/1:9,0:7:7.67:8,0,63	0/0:19,2:21:20.70:0,21,493	0/0:22,0:22:63.09:0,63,644	0/0:19,0:19:48.10:0,48,501	1/1:3,19:22:56.92:468,57,0	0/0:26,0:26:69.16:0,69,729	0/0:13,0:13:35.63:0,36,348	0/0:10,0:11:33.02:0,33,333	0/0:18,0:18:51.12:0,51,537	0/0:20,1:21:48.33:0,48,586	0/0:18,0:18:45.09:0,45,468	0/0:24,0:24:66.13:0,66,682	0/0:20,1:21:32.48:0,32,539	1/1:3,25:28:65.91:542,66,0	1/1:2,16:18:44.95:369,45,0	1/1:2,15:17:46.67:358,47,0	1/1:0,17:18:52.81:409,53,0	1/1:1,13:14:32.96:271,33,0	0/0:12,0:12:33.08:0,33,346	0/0:17,0:17:42.09:0,42,438	0/0:26,1:27:50.65:0,51,722	0/1:16,2:18:1.17:1,0,400	1/1:4,24:28:42.91:557,43,0	1/1:6,21:27:53.92:443,54,0	1/1:1,8:9:17.98:148,18,0
chr10	108620549	.	CACCGCAA	C	307.12	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=3.232;DP=425;FS=1.586;HRun=0;HaplotypeScore=130.5166;InbreedingCoeff=0.9571;MQ=79.28;MQ0=0;MQRankSum=-2.613;QD=43.87;ReadPosRankSum=0.400;VQSLOD=3.5923;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:71.99:0,72,2108	1/1:2,5:7:15.05:395,15,0	0/0:11,0:11:22.74:0,23,828	0/0:17,0:17:44.27:0,44,1537	0/0:11,0:11:33.11:0,33,1203	0/0:10,0:10:27.09:0,27,1090	0/0:21,0:21:60.21:0,60,2226	0/0:19,0:19:54.17:0,54,1846	0/0:18,0:18:51.18:0,51,2001	0/0:12,0:12:30.10:0,30,1161	0/0:11,0:11:33.11:0,33,1278	0/0:13,0:13:36.11:0,36,1357	0/0:9,0:9:27.09:0,27,1049	0/0:24,0:24:72.25:0,72,2804	0/0:9,0:9:27.09:0,27,1038	0/0:8,0:8:24.08:0,24,959	0/0:14,0:14:36.07:0,36,1232	0/0:33,0:32:96.30:0,96,3628	0/0:10,0:10:30.10:0,30,1200	0/0:8,0:8:21.07:0,21,787	0/0:57,0:57:99:0,99,3563	0/0:7,0:7:21.07:0,21,847	0/0:6,0:6:18.06:0,18,694	0/0:25,0:25:75.25:0,75,2899	0/0:9,0:9:27.09:0,27,1068	0/0:18,0:18:51.18:0,51,2015	0/0:11,0:11:27.08:0,27,904	./.
chr10	108620591	.	T	TC	1162.74	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=6.622;DP=380;FS=33.387;HRun=3;HaplotypeScore=87.0528;InbreedingCoeff=0.8714;MQ=92.11;MQ0=0;MQRankSum=-7.108;QD=32.30;ReadPosRankSum=1.519;VQSLOD=1.4441;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,7:13:30.57:418,31,0	0/0:5,0:5:12.03:0,12,138	0/0:22,0:21:59.51:0,60,642	0/0:19,0:19:48.12:0,48,550	0/0:12,0:12:30.09:0,30,359	0/0:12,0:12:36.11:0,36,431	0/0:24,0:24:60.17:0,60,709	0/0:6,0:6:18.06:0,18,216	0/0:10,0:10:30.08:0,30,350	0/0:11,0:11:24.07:0,24,287	0/0:15,0:15:42.08:0,42,478	0/0:15,0:15:45.14:0,45,539	0/0:15,0:15:42.13:0,42,503	0/0:29,0:29:84.25:0,84,997	0/0:8,0:8:21.06:0,21,252	0/0:7,0:7:21.06:0,21,252	1/1:0,8:8:21.07:293,21,0	1/1:1,14:14:42.14:592,42,0	0/0:14,0:14:39.12:0,39,467	0/0:2,0:2:6.01:0,6,63	0/0:50,0:50:6.01:0,6,69	0/0:4,0:4:9.03:0,9,108	0/0:8,0:8:24.07:0,24,287	0/0:19,0:19:54.17:0,54,648	0/0:9,0:9:27.08:0,27,324	0/0:21,0:21:42.35:0,42,464	0/0:7,0:7:8.03:0,8,62	./.
chr10	108620594	.	CAAGTACCGAGGCCCCAAGCCCTGTGGCTTCCACCCT	C	8316.92	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=7.991;DP=368;FS=20.671;HRun=0;HaplotypeScore=303.9670;InbreedingCoeff=0.9292;MQ=92.71;MQ0=0;MQRankSum=-8.553;QD=60.27;ReadPosRankSum=-1.047;VQSLOD=2.0945;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:13:36.08:1895,36,0	1/1:2,3:5:11.97:637,12,0	0/0:21,0:20:50.28:0,50,2278	0/0:18,0:18:47.90:0,48,1988	0/0:10,0:10:27.01:0,27,2229	0/0:12,0:12:36.10:0,36,3865	0/0:20,0:20:57.16:0,57,4687	1/1:6,0:6:17.87:132,18,0	0/0:10,0:10:27.08:0,27,2552	0/0:10,0:10:24.08:0,24,1884	0/0:15,0:15:36.12:0,36,3235	0/0:16,0:16:45.02:0,45,4217	0/0:16,0:16:48.13:0,48,4790	0/0:28,0:28:78.19:0,78,6765	0/0:8,0:8:24.07:0,24,2403	0/0:7,0:7:21.06:0,21,1554	1/1:8,0:8:20.86:672,21,0	1/1:14,0:13:42.02:1350,42,0	1/1:13,0:13:38.57:368,39,0	1/1:2,0:2:3.01:212,3,0	1/1:1,46:47:5.95:248,6,0	0/0:3,0:3:8.95:0,9,239	0/0:8,0:8:24.07:0,24,1323	0/0:19,0:19:57.15:0,57,4797	0/0:9,0:9:27.07:0,27,1700	1/1:1,22:23:59.93:2016,60,0	1/1:0,7:7:8.62:788,9,0	./.
chr10	108620600	.	CCGAGGCCCCAAGCCCTGTGGCTTCCACCCT	C	5342.74	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=9.394;DP=356;FS=33.753;HRun=0;HaplotypeScore=264.1631;InbreedingCoeff=0.6306;MQ=92.65;MQ0=0;MQRankSum=-8.416;QD=46.46;ReadPosRankSum=4.656;VQSLOD=2.3367;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,4:13:20.71:1560,21,0	0/1:5,0:5:39.92:397,0,40	0/0:20,0:19:54.19:0,54,2853	0/0:18,0:18:54.18:0,54,2950	0/0:8,0:8:24.08:0,24,2621	0/0:13,0:13:39.13:0,39,4164	0/0:20,0:20:60.21:0,60,5812	0/0:5,0:5:15.05:0,15,240	0/0:10,0:10:30.10:0,30,3013	0/0:10,0:10:30.10:0,30,2832	0/0:14,0:14:36.12:0,36,3694	0/0:15,0:15:45.15:0,45,4578	0/0:16,0:16:48.16:0,48,5281	0/0:26,0:26:78.21:0,78,7366	0/0:9,0:9:27.09:0,27,2932	0/0:7,0:7:21.05:0,21,1800	0/1:7,0:7:1.77:490,0,2	1/1:14,0:13:11.06:995,11,0	0/0:11,0:11:26.74:0,27,366	1/1:1,0:1:3.01:142,3,0	1/1:46,0:46:3.01:160,3,0	0/0:5,0:5:12:0,12,813	0/0:8,0:8:24.08:0,24,1738	0/0:18,0:18:54.19:0,54,5127	0/0:8,0:8:24.07:0,24,1884	0/1:22,0:22:99:1019,0,181	1/1:7,0:7:8.86:579,9,0	./.
chr10	108620606	.	C	CCCCG	2596.91	PASS	AB=1.000;AC=19;AF=0.352;AN=54;BaseQRankSum=9.649;DP=341;FS=30.959;HRun=0;HaplotypeScore=98.7403;InbreedingCoeff=0.8200;MQ=96.61;MQ0=0;MQRankSum=-9.180;QD=22.01;ReadPosRankSum=2.359;VQSLOD=1.7383;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,2:11:24.08:542,24,0	1/1:4,0:4:9.03:203,9,0	0/0:21,0:20:45.12:0,45,777	0/0:19,0:19:45.13:0,45,772	0/0:8,0:8:24.08:0,24,456	0/0:12,0:12:36.12:0,36,676	0/0:19,0:19:54.19:0,54,1023	1/1:4,0:4:6.02:128,6,0	0/0:11,0:11:30.10:0,30,567	0/0:13,0:13:30.10:0,30,568	0/0:12,0:12:36.12:0,36,684	0/0:14,0:14:36.12:0,36,682	0/0:15,0:15:42.14:0,42,796	0/0:24,0:24:69.24:0,69,1304	0/0:9,0:9:24.08:0,24,456	0/0:7,0:7:21.07:0,21,398	1/1:4,3:7:15.05:351,15,0	1/1:5,7:12:30.10:728,30,0	1/1:4,0:4:3.01:43,3,0	1/1:0,1:1:3.01:80,3,0	1/1:46,0:46:3.01:80,3,0	0/0:4,0:4:6.02:0,6,114	0/0:9,0:9:24.08:0,24,455	0/0:17,0:17:51.16:0,51,926	0/0:9,0:9:27.06:0,27,443	1/1:22,0:22:25.62:526,26,0	0/1:7,0:7:1.82:106,0,2	./.
chr10	108620621	.	CTT	C	604.17	PASS	AB=0.827;AC=7;AF=0.135;AN=52;BaseQRankSum=7.047;DP=315;FS=2.987;HRun=2;HaplotypeScore=90.4474;InbreedingCoeff=0.4034;MQ=96.48;MQ0=0;MQRankSum=-7.473;QD=10.98;ReadPosRankSum=3.063;VQSLOD=1.0449;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:6,6:14:0.55:298,0,1	0/1:3,0:3:0.80:51,0,1	0/0:18,0:18:51.17:0,51,1003	0/0:19,0:19:56.97:0,57,907	0/0:9,0:9:27.09:0,27,549	0/0:11,0:11:33.11:0,33,671	0/0:20,0:20:60.21:0,60,1217	./.	0/0:12,0:12:36.12:0,36,713	0/0:12,0:12:33.11:0,33,666	0/0:11,0:11:33.10:0,33,624	0/0:13,0:13:39.13:0,39,793	0/0:13,0:13:39.13:0,39,791	0/0:22,0:22:66.21:0,66,1304	0/0:8,0:8:24.08:0,24,488	0/0:6,0:6:18.06:0,18,366	0/0:0,0:2:4.99:0,5,18	0/1:0,5:8:4.41:213,0,4	./.	0/0:0,0:1:2.50:0,2,9	0/0:46,0:46:2.43:0,2,9	0/0:6,0:6:15.05:0,15,294	0/0:8,0:8:21.06:0,21,371	0/0:14,0:14:42.14:0,42,853	0/0:9,0:9:27.09:0,27,536	0/1:22,0:22:30.13:95,0,30	0/1:7,0:7:1:21,0,1	1/1:0,1:1:3.01:49,3,0
chr10	108620626	.	A	AT	535.95	PASS	AB=0.869;AC=6;AF=0.107;AN=56;BaseQRankSum=5.847;DP=336;FS=0.898;HRun=0;HaplotypeScore=86.7322;InbreedingCoeff=0.1763;MQ=94.86;MQ0=0;MQRankSum=-4.796;QD=12.76;ReadPosRankSum=-0.421;VQSLOD=4.0860;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,5:16:24.09:310,0,24	0/0:6,0:6:3.32:0,3,71	0/0:21,0:21:57.17:0,57,764	0/0:17,0:17:50.98:0,51,614	0/0:9,0:9:27.09:0,27,372	0/0:11,0:11:33.09:0,33,443	0/0:18,0:18:54.17:0,54,738	0/1:5,0:5:3.09:5,0,3	0/0:12,0:12:36.11:0,36,487	0/0:11,0:11:33.10:0,33,437	0/0:10,0:10:30.06:0,30,381	0/0:13,0:13:39.13:0,39,545	0/0:15,0:15:39.13:0,39,545	0/0:20,0:20:60.20:0,60,838	0/0:9,0:9:27.09:0,27,377	0/0:7,0:7:21.06:0,21,277	0/1:3,0:3:23.16:29,0,23	0/1:10,5:15:60.73:294,0,61	1/1:3,0:3:2.92:8,3,0	0/0:3,0:3:4.80:0,5,27	0/0:46,0:46:3.01:0,3,34	0/0:6,0:6:12.04:0,12,167	0/0:7,0:7:18.02:0,18,226	0/0:13,0:13:39.13:0,39,541	0/0:10,0:10:27.09:0,27,373	0/0:22,0:22:8.15:0,8,60	0/0:7,0:7:7.37:0,7,49	0/0:1,0:1:1.25:0,1,3
chr10	108621411	.	T	TGCTGTCCC	1036	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.950;DP=660;FS=1.298;HRun=0;HaplotypeScore=161.9402;InbreedingCoeff=0.9918;MQ=78.44;MQ0=0;MQRankSum=-5.078;QD=64.75;ReadPosRankSum=0.086;VQSLOD=3.3762;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,114,2959	0/0:10,0:10:24.08:0,24,626	0/0:15,0:15:24.08:0,24,601	0/0:15,0:14:24.08:0,24,616	0/0:16,0:16:33.11:0,33,856	0/0:18,0:18:48.16:0,48,1214	0/0:31,0:31:72.25:0,72,1838	0/0:36,0:36:66.15:0,66,1530	0/0:25,0:25:66.21:0,66,1595	0/0:20,0:19:48.16:0,48,1189	0/0:14,0:14:33.11:0,33,823	1/1:7,8:16:27.09:1130,27,0	0/0:30,0:30:84.27:0,84,2102	0/0:26,0:26:63.17:0,63,1386	0/0:20,0:20:39.13:0,39,1018	0/0:22,0:22:39.12:0,39,959	0/0:42,0:41:99:0,99,2485	0/0:22,0:22:54.17:0,54,1356	0/0:20,0:20:33.08:0,33,735	0/0:20,0:20:51.18:0,51,1304	0/0:49,0:49:99:0,114,2827	0/0:17,0:17:42.13:0,42,983	0/0:21,0:21:57.20:0,57,1422	0/0:32,0:32:81.26:0,81,1970	0/0:23,0:23:48.16:0,48,1245	0/0:19,0:19:45.14:0,45,1122	0/0:21,0:21:36.12:0,36,934	0/0:12,0:12:36.12:0,36,940
chr10	108623401	.	T	TG	819.21	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=2.997;DP=440;FS=11.185;HRun=12;HaplotypeScore=94.9479;InbreedingCoeff=0.5401;MQ=83.91;MQ0=2;MQRankSum=-2.170;QD=3.11;ReadPosRankSum=-1.761;VQSLOD=-0.5665;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:8.30:41,8,0	0/0:3,0:7:10.19:0,10,30	0/0:24,0:21:11.06:0,11,61	0/1:17,0:16:21.80:22,0,39	0/0:13,0:14:2.79:0,3,21	0/1:16,0:16:10.88:11,0,54	0/0:11,0:12:4.67:0,5,27	1/1:21,0:21:24.05:134,24,0	0/0:18,0:18:4.08:0,4,26	0/0:8,1:9:3.85:0,4,24	0/0:10,0:10:5.95:0,6,44	1/1:12,0:12:26.07:142,26,0	0/0:14,0:15:2.88:0,3,22	0/0:16,0:16:11.85:0,12,87	1/1:7,6:13:3:29,3,0	0/0:12,0:14:10.91:0,11,71	1/1:22,0:22:27.34:129,27,0	1/1:22,0:22:13.84:76,14,0	1/1:16,0:20:20:119,20,0	1/1:17,0:17:12.53:49,13,0	1/1:14,0:14:13.62:59,14,0	0/1:16,0:16:15.84:18,0,16	0/0:10,0:11:2.02:0,2,6	0/0:17,0:17:11.53:0,12,72	0/0:10,0:10:6.43:0,6,44	1/1:12,0:12:8.10:34,8,0	1/1:18,0:20:27.16:121,27,0	1/1:13,0:13:5.58:27,6,0
chr10	108623403	.	G	GGA	2390.37	PASS	AB=0.631;AC=19;AF=0.339;AN=56;BaseQRankSum=-3.488;DP=388;FS=45.936;HRun=0;HaplotypeScore=73.8041;InbreedingCoeff=0.7092;MQ=85.17;MQ0=2;MQRankSum=-3.363;QD=12.32;ReadPosRankSum=3.850;VQSLOD=1.5157;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,8:32:51.26:95,0,51	0/0:7,0:7:15:0,15,132	0/0:22,0:20:22.51:0,23,369	0/0:16,0:15:28.68:0,29,267	0/0:8,0:8:9.40:0,9,91	0/0:15,0:15:34.57:0,35,346	0/0:8,0:8:12.89:0,13,124	0/1:8,11:24:9.54:391,0,10	0/0:13,0:13:23.88:0,24,215	0/0:8,0:8:12.47:0,12,125	0/0:7,0:7:12.02:0,12,145	1/1:13,0:13:25.57:124,26,0	0/0:12,0:12:20.51:0,21,198	0/0:13,0:13:30.03:0,30,337	0/0:12,0:12:11.75:0,12,91	0/0:10,0:10:27.03:0,27,296	1/1:4,12:22:29.01:446,29,0	1/1:4,8:21:10.83:162,11,0	1/1:16,2:18:36.16:299,36,0	0/1:8,9:17:9.99:207,0,10	1/1:1,8:11:14.88:212,15,0	0/0:13,0:13:18.85:0,19,175	0/0:7,0:7:15.45:0,15,126	0/0:14,0:14:36.03:0,36,370	0/0:8,0:8:9.49:0,9,118	1/1:1,5:7:14.84:160,15,0	1/1:5,10:19:29.94:433,30,0	1/1:4,1:10:5.83:64,6,0
chr10	108623404	.	G	GA	1177.92	PASS	AB=0.976;AC=17;AF=0.304;AN=56;BaseQRankSum=0.256;DP=370;FS=79.925;HRun=0;HaplotypeScore=55.1207;InbreedingCoeff=0.4696;MQ=84.14;MQ0=2;MQRankSum=-1.526;QD=6.54;ReadPosRankSum=7.061;VQSLOD=-0.1457;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,1:31:43.19:53,0,43	0/0:7,0:7:14.82:0,15,102	0/0:21,0:18:43.17:0,43,440	0/0:16,0:15:37.89:0,38,302	0/0:8,0:8:10.25:0,10,95	0/0:16,0:16:40.57:0,41,385	0/0:9,0:9:13.54:0,14,118	0/1:21,0:21:73.31:108,0,73	0/0:12,0:12:26.92:0,27,236	0/0:8,0:8:12.89:0,13,122	0/0:6,0:6:15.02:0,15,163	1/1:1,13:14:27.08:358,27,0	0/0:12,0:12:26.97:0,27,243	0/0:14,0:14:30.04:0,30,322	0/0:12,0:12:10.66:0,11,97	0/0:10,0:10:27.02:0,27,281	1/1:21,1:22:4.51:150,5,0	1/1:17,1:18:14.37:114,14,0	0/1:15,1:16:38.95:158,0,39	0/1:15,0:15:68.96:69,0,71	1/1:9,1:10:14.69:106,15,0	0/0:12,0:12:22.08:0,22,197	0/0:6,0:6:11.96:0,12,95	0/0:13,0:13:36.01:0,36,355	0/0:8,0:8:12.46:0,12,130	1/1:6,1:7:4.71:86,5,0	0/1:19,0:19:16.47:101,0,16	1/1:6,1:7:5.93:56,6,0
chr10	108624476	.	A	AG	1086.02	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.099;DP=609;FS=15.826;HRun=6;HaplotypeScore=83.7124;InbreedingCoeff=0.9918;MQ=88.26;MQ0=0;MQRankSum=-3.335;QD=27.15;ReadPosRankSum=2.674;VQSLOD=2.5107;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:96.20:0,96,979	1/1:2,9:11:27.09:339,27,0	0/0:22,0:22:49.98:0,50,498	0/0:22,0:22:56.71:0,57,553	0/0:13,0:13:33.07:0,33,337	0/0:20,0:20:48.09:0,48,483	0/0:27,0:27:72.09:0,72,705	0/0:25,0:25:57.11:0,57,576	0/0:34,0:34:93.21:0,93,948	0/0:26,0:26:57.13:0,57,582	0/0:12,0:12:21.04:0,21,214	1/1:3,26:29:69.22:868,69,0	0/0:16,0:16:45.10:0,45,459	0/0:20,0:20:48.10:0,48,490	0/0:19,0:19:57.12:0,57,578	0/0:24,0:24:63.13:0,63,636	0/0:28,0:28:84.19:0,84,856	0/0:19,0:19:54.08:0,54,541	0/0:16,0:16:39.08:0,39,398	0/0:9,0:9:21.05:0,21,214	0/0:51,0:51:99:0,123,1255	0/0:18,0:18:42.09:0,42,428	0/0:8,0:8:21.05:0,21,214	0/0:38,0:38:99:0,108,1072	0/0:13,0:13:39.08:0,39,391	0/0:29,0:29:72.60:0,73,730	0/0:12,0:12:33.08:0,33,337	0/0:8,0:8:24.03:0,24,236
chr10	108625517	.	G	GCA	3385.63	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.094;DP=1140;FS=7.747;HRun=0;HaplotypeScore=248.5200;InbreedingCoeff=0.9922;MQ=54.95;MQ0=21;MQRankSum=-2.496;QD=24.18;ReadPosRankSum=1.271;VQSLOD=2.9803;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,36:51:44.20:884,44,0	0/0:13,0:13:39.11:0,39,495	0/0:70,0:19:50.98:0,51,598	0/0:81,0:34:13.74:0,14,589	0/0:18,0:18:45.13:0,45,577	0/0:22,0:22:48.16:0,48,630	0/0:44,0:44:99:0,120,1575	0/0:42,0:42:87.20:0,87,1131	0/0:44,0:44:99:0,120,1562	0/0:42,0:41:99:0,111,1429	0/0:19,0:18:45.13:0,45,576	0/0:53,0:53:98.69:0,99,535	0/0:44,0:44:99:0,126,1621	0/0:33,0:33:87.25:0,87,1112	0/0:36,0:36:84.70:0,85,1059	0/0:34,0:34:93.27:0,93,1193	1/1:9,41:51:77.89:1336,78,0	1/1:6,31:38:57.53:1166,58,0	0/0:28,0:24:45.35:0,45,697	0/0:26,0:25:63.19:0,63,812	0/0:125,1:126:99:0,301,3858	0/0:22,0:22:60.19:0,60,789	0/0:21,0:21:60.18:0,60,773	0/0:86,0:86:99:0,223,2860	0/0:31,0:31:75.10:0,75,986	0/0:39,0:39:99:0,108,1407	0/0:16,0:15:45.15:0,45,591	0/0:10,0:10:30.10:0,30,394
chr10	108625524	.	CAT	C	1410.97	PASS	AB=0.978;AC=3;AF=0.054;AN=56;BaseQRankSum=6.268;DP=1169;FS=1.226;HRun=0;HaplotypeScore=254.0070;InbreedingCoeff=0.5818;MQ=54.65;MQ0=25;MQRankSum=1.207;QD=9.94;ReadPosRankSum=1.372;VQSLOD=2.9632;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:55.31:0,55,735	0/0:14,0:14:42.11:0,42,721	0/0:78,2:20:3.27:0,3,705	0/1:84,1:31:16.23:16,0,766	0/0:19,0:19:57.13:0,57,967	0/0:22,0:22:60.09:0,60,1072	0/0:43,0:43:99:0,126,2285	0/0:43,0:43:99:0,114,1933	0/0:42,0:42:99:0,120,2235	0/0:46,0:45:99:0,126,2198	0/0:19,0:18:51.14:0,51,873	1/1:3,52:55:99:1500,102,0	0/0:45,0:45:99:0,132,2330	0/0:34,0:34:99:0,99,1739	0/0:32,0:32:89.82:0,90,1606	0/0:37,0:37:99:0,108,1887	0/0:51,0:51:87.15:0,87,954	0/0:35,0:35:38.77:0,39,716	0/0:27,0:23:68.16:0,68,1075	0/0:29,0:28:78.10:0,78,1330	0/0:131,0:131:99:0,334,5783	0/0:22,0:22:66.20:0,66,1172	0/0:23,0:23:66.18:0,66,1138	0/0:82,1:83:99:0,228,4157	0/0:28,1:30:71.09:0,71,1392	0/0:41,0:41:99:0,120,2102	0/0:17,0:16:51.14:0,51,888	0/0:11,0:11:33.09:0,33,584
chr10	108625577	.	G	GCA	11379.11	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=6.717;DP=1164;FS=12.050;HRun=0;HaplotypeScore=197.6792;InbreedingCoeff=0.9536;MQ=56.69;MQ0=17;MQRankSum=6.199;QD=36.24;ReadPosRankSum=0.045;VQSLOD=4.8882;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:93.17:0,93,1194	0/0:12,0:12:0.17:0,0,246	0/0:80,0:37:63.13:0,63,746	0/0:83,0:35:58.73:0,59,745	0/0:22,0:22:60.16:0,60,741	0/0:17,0:17:36.10:0,36,449	0/0:42,0:42:99:0,102,1297	1/1:9,36:45:93.25:1458,93,0	0/0:44,0:44:99:0,114,1452	0/0:42,0:42:99:0,105,1337	0/0:18,0:18:48.15:0,48,617	0/0:57,0:57:99:0,135,1706	0/0:45,0:45:99:0,120,1543	0/0:39,0:39:99:0,108,1362	0/0:35,0:35:81.24:0,81,1026	0/0:39,0:39:99:0,108,1375	0/0:47,0:47:99:0,105,1318	0/0:29,0:29:44.01:0,44,860	1/1:9,16:24:22.49:727,22,0	1/1:5,29:34:84.29:1413,84,0	1/1:18,114:135:99:4556,271,0	0/0:33,0:33:96.30:0,96,1222	0/0:20,0:20:45.15:0,45,579	0/0:64,0:64:99:0,165,2087	0/0:27,0:27:72.23:0,72,926	1/1:5,38:44:99:1976,120,0	1/1:4,15:19:48.16:794,48,0	1/1:1,9:10:27.09:456,27,0
chr10	108625815	.	G	GC	12774.89	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-19.104;DP=765;FS=0.559;HRun=3;HaplotypeScore=66.9966;InbreedingCoeff=0.9999;MQ=86.29;MQ0=0;MQRankSum=-2.904;QD=37.46;ReadPosRankSum=1.689;VQSLOD=5.2941;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,41:44:99:1596,114,0	0/0:13,0:13:36.11:0,36,432	0/0:30,0:30:86.23:0,86,948	0/0:23,0:23:40.71:0,41,542	0/0:16,0:16:48.15:0,48,576	0/0:24,0:24:63.18:0,63,745	0/0:25,0:25:75.23:0,75,900	1/1:0,27:27:81.27:1132,81,0	0/0:25,0:25:72.22:0,72,864	0/0:32,0:32:87.27:0,87,1044	0/0:10,0:10:30.09:0,30,359	1/1:0,33:33:93.07:1302,93,0	0/0:26,0:26:78.24:0,78,936	0/0:32,0:32:96.28:0,96,1140	0/0:29,0:29:87.27:0,87,1044	0/0:35,0:35:99:0,105,1249	1/1:3,38:41:99:1554,111,0	1/1:1,24:25:69.23:966,69,0	1/1:5,25:30:75.23:1029,75,0	1/1:1,23:24:66.22:924,66,0	1/1:3,46:48:99:1806,129,0	0/0:25,0:25:72.22:0,72,864	0/0:24,0:24:72.20:0,72,852	0/0:28,0:28:78.20:0,78,919	0/0:27,0:26:81.24:0,81,962	1/1:2,30:32:57.28:1206,57,0	1/1:2,19:21:51.17:712,51,0	1/1:1,14:15:39.13:546,39,0
chr10	108626553	.	C	CCGGGCTCAT	1030.91	PASS	AB=0.976;AC=5;AF=0.096;AN=52;BaseQRankSum=2.229;DP=925;FS=9.113;HRun=0;HaplotypeScore=145.5758;InbreedingCoeff=0.2831;MQ=38.72;MQ0=200;MQRankSum=-4.535;QD=5.54;ReadPosRankSum=0.361;VQSLOD=2.0509;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:20:39.11:0,39,1119	1/1:33,3:16:9.42:425,9,0	./.	./.	0/0:23,0:14:15.03:0,15,414	0/1:19,0:19:38.02:38,0,1176	0/0:23,0:19:24.07:0,24,708	0/0:31,0:5:2.99:0,3,23	0/0:27,0:27:72.22:0,72,2195	0/0:39,0:30:87.25:0,87,2658	0/0:31,0:25:21.07:0,21,675	0/1:70,3:23:99:673,0,449	0/0:30,0:30:78.20:0,78,2249	0/0:39,0:39:99:0,102,3172	0/0:30,0:29:81.24:0,81,2317	0/0:32,0:32:93.27:0,93,2629	0/0:30,0:27:45.15:0,45,1457	0/0:20,0:16:27.01:0,27,743	0/0:26,0:18:51.15:0,51,1414	0/0:45,0:27:24.04:0,24,704	0/1:54,0:40:5.46:5,0,1627	0/0:33,0:24:21.07:0,21,682	0/0:25,0:22:21.96:0,22,634	0/0:31,0:30:63.18:0,63,1852	0/0:19,0:13:18.06:0,18,561	0/0:50,0:31:93.29:0,93,2750	0/0:38,0:30:74.98:0,75,2339	0/0:15,0:11:24.08:0,24,782
chr10	108626965	.	CTCAT	C	1010.84	PASS	AB=0.841;AC=7;AF=0.135;AN=52;BaseQRankSum=8.563;DP=783;FS=2.888;HRun=0;HaplotypeScore=55.4693;InbreedingCoeff=0.0767;MQ=22.38;MQ0=406;MQRankSum=-4.632;QD=4.27;ReadPosRankSum=2.532;VQSLOD=1.1295;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:20:33.11:0,33,947	0/0:25,0:9:15.01:0,15,319	./.	./.	0/0:14,0:10:12.04:0,12,346	0/0:17,0:12:9.03:0,9,260	0/0:28,0:5:9.03:0,9,229	0/0:49,0:2:3.01:0,3,81	0/0:23,0:15:24.08:0,24,655	0/0:30,0:17:51.18:0,51,1457	0/0:15,0:9:12.04:0,12,347	0/0:16,1:8:3.01:0,3,82	0/0:32,0:23:41.77:0,42,1001	0/0:21,0:14:15.05:0,15,404	0/0:33,0:21:42.14:0,42,1213	0/0:31,0:23:36.04:0,36,965	0/0:11,0:3:3.01:0,3,87	0/0:13,0:7:21.04:0,21,530	0/1:30,3:4:75.06:75,0,162	0/1:41,7:9:69.77:131,0,70	0/1:57,4:5:34.87:35,0,80	0/0:15,0:13:9.03:0,9,260	0/0:23,0:19:21.03:0,21,540	0/0:16,0:9:18.06:0,18,521	0/0:19,0:13:12.04:0,12,346	0/1:26,7:18:99:251,0,564	0/1:17,19:18:99:406,0,234	1/1:15,11:7:18.06:244,18,0
chr10	108628013	.	CCAGGCTCAT	C	282.21	PASS	AB=0.826;AC=2;AF=0.053;AN=38;BaseQRankSum=2.870;DP=947;FS=0.000;HRun=0;HaplotypeScore=38.3151;InbreedingCoeff=-0.1431;MQ=14.20;MQ0=574;MQRankSum=1.448;QD=3.32;ReadPosRankSum=1.629;VQSLOD=1.2412;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:13:12.04:0,12,587	0/0:168,2:18:14.99:0,15,569	./.	./.	./.	./.	./.	0/0:26,0:2:3.01:0,3,152	0/0:23,0:14:6.02:0,6,204	0/0:38,0:6:18.06:0,18,832	0/0:15,0:3:3.01:0,3,86	0/1:33,22:21:99:326,0,374	0/0:23,0:16:8.66:0,9,355	0/0:23,0:16:8.76:0,9,394	0/0:28,0:20:14.68:0,15,755	0/0:25,0:15:6.02:0,6,254	0/0:13,0:4:6.02:0,6,222	0/0:16,0:3:3.01:0,3,74	0/0:24,0:3:9.03:0,9,425	0/0:29,1:10:2.77:0,3,151	0/0:62,5:11:9.03:0,9,452	./.	./.	0/0:29,0:12:6.02:0,6,302	./.	0/0:40,3:7:18.06:0,18,906	0/1:28,2:16:39.94:40,0,459	./.
chr10	108628815	.	A	AACC	98.01	PASS	AB=0.978;AC=6;AF=0.188;AN=32;BaseQRankSum=1.422;DP=677;FS=2.764;HRun=0;HaplotypeScore=36.9989;InbreedingCoeff=0.3557;MQ=20.91;MQ0=301;MQRankSum=-0.129;QD=0.62;ReadPosRankSum=0.065;VQSLOD=0.6639;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:13,1:4:3.01:54,3,0	./.	./.	./.	./.	./.	0/0:24,0:1:3.01:0,3,49	0/0:25,0:12:2.84:0,3,21	0/0:18,0:4:9.03:0,9,147	./.	0/1:64,7:23:0.34:125,0,0	0/0:18,0:10:2.82:0,3,49	0/1:32,0:18:0.01:0,0,0	0/0:25,0:9:0:0,0,0	0/0:27,0:17:8.90:0,9,60	./.	0/1:18,0:6:0:0,0,0	0/0:18,0:3:9.03:0,9,147	0/0:19,0:6:3.01:0,3,49	0/0:44,0:24:6.02:0,6,98	./.	./.	./.	./.	0/0:24,0:10:24.08:0,24,392	0/0:31,0:20:9.55:0,10,78	0/1:23,0:11:0.05:0,0,0
chr10	108628819	.	A	ACCG	87.02	PASS	AB=0.940;AC=6;AF=0.176;AN=34;BaseQRankSum=1.834;DP=698;FS=5.179;HRun=0;HaplotypeScore=39.0952;InbreedingCoeff=0.2898;MQ=21.37;MQ0=291;MQRankSum=-0.514;QD=0.54;ReadPosRankSum=-0.122;VQSLOD=0.8086;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/1:11,6:7:11.98:67,0,12	./.	./.	./.	./.	./.	0/0:28,0:1:3.01:0,3,56	0/0:26,0:12:3.01:0,3,39	0/0:20,0:5:11.83:0,12,180	./.	0/1:68,0:22:0.61:87,0,1	0/0:19,0:11:3.30:0,3,56	0/1:33,0:18:0.01:0,0,0	0/0:26,0:10:0:0,0,0	0/0:27,0:18:9.03:0,9,115	./.	0/1:17,0:6:0:1,0,0	0/0:19,0:3:9.03:0,9,168	0/0:21,0:6:3.01:0,3,56	0/0:43,0:24:6.02:0,6,112	./.	./.	./.	0/0:15,0:5:0:0,0,0	0/0:25,0:11:24.08:0,24,447	0/0:32,0:20:13.68:0,14,121	1/1:24,0:11:2.98:21,3,0
chr10	108629945	.	A	AAAC	653.68	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.564;DP=686;FS=8.063;HRun=0;HaplotypeScore=111.5625;InbreedingCoeff=0.9432;MQ=90.35;MQ0=0;MQRankSum=-3.364;QD=36.32;ReadPosRankSum=-2.696;VQSLOD=3.1782;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,2190	1/1:1,17:17:36.12:748,36,0	0/0:25,0:25:60.01:0,60,952	0/0:35,0:35:89.86:0,90,1379	0/0:28,0:28:75.24:0,75,1293	0/0:28,0:28:75.24:0,75,1294	0/0:20,0:20:60.14:0,60,939	0/0:46,0:46:99:0,138,2350	0/0:21,0:21:63.22:0,63,1102	0/0:31,0:31:93.31:0,93,1617	0/0:21,0:21:51.14:0,51,837	0/0:19,0:17:51.14:0,51,867	0/0:11,0:11:27.09:0,27,472	0/0:25,0:25:72.24:0,72,1243	0/0:28,0:28:81.28:0,81,1422	0/0:18,0:18:51.17:0,51,894	0/0:24,0:24:66.21:0,66,1137	0/0:11,0:11:27.04:0,27,415	0/0:17,0:17:48.16:0,48,842	0/0:26,0:26:75.19:0,75,1234	0/0:23,0:23:63.22:0,63,1111	0/0:24,0:24:65.99:0,66,1163	0/0:33,0:33:90.25:0,90,1548	0/0:19,0:19:54.19:0,54,952	0/0:36,0:36:93.32:0,93,1635	0/0:26,0:26:78.27:0,78,1376	0/0:24,0:24:72.25:0,72,1270	0/0:4,0:4:9.02:0,9,140
chr10	108629995	.	C	CCA	477.94	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.979;DP=738;FS=5.395;HRun=0;HaplotypeScore=111.2495;InbreedingCoeff=0.9983;MQ=75.55;MQ0=0;MQRankSum=-2.715;QD=36.76;ReadPosRankSum=-0.955;VQSLOD=5.5191;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,1911	0/0:14,0:13:30.10:0,30,458	0/0:37,0:33:65.43:0,65,1046	0/0:31,0:28:45.34:0,45,947	0/0:30,0:30:69.18:0,69,1010	0/0:36,0:36:99:0,102,1508	0/0:26,0:26:75.25:0,75,1149	0/0:37,0:37:99:0,105,1573	0/0:22,0:22:66.22:0,66,1005	0/0:29,0:29:87.30:0,87,1328	0/0:26,0:26:50.91:0,51,781	1/1:3,10:13:29.72:572,30,0	0/0:15,0:15:45.15:0,45,687	0/0:24,0:24:72.24:0,72,1102	0/0:31,0:31:93.32:0,93,1414	0/0:19,0:19:57.19:0,57,873	0/0:27,0:27:75.17:0,75,1076	0/0:13,0:13:39.13:0,39,597	0/0:26,0:25:72.21:0,72,1065	0/0:26,0:26:78.26:0,78,1194	0/0:33,0:33:93.28:0,93,1379	0/0:27,0:27:78.13:0,78,1194	0/0:27,0:27:69.23:0,69,1046	0/0:16,0:16:48.15:0,48,713	0/0:36,0:36:99:0,99,1516	0/0:26,0:26:75.25:0,75,1124	0/0:32,0:32:93.32:0,93,1423	0/0:14,0:14:29.95:0,30,437
chr10	108630000	.	G	GC	471.78	PASS	AB=0.923;AC=3;AF=0.054;AN=56;BaseQRankSum=6.799;DP=735;FS=10.214;HRun=0;HaplotypeScore=93.3150;InbreedingCoeff=0.6540;MQ=77.49;MQ0=0;MQRankSum=-1.725;QD=9.44;ReadPosRankSum=-2.234;VQSLOD=2.6071;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,1:44:99:0,126,1761	0/0:13,0:12:30.10:0,30,416	0/1:33,3:32:15.44:15,0,853	0/0:33,0:29:52.43:0,52,749	0/0:30,0:30:66.22:0,66,918	0/0:37,0:37:99:0,102,1406	0/0:24,0:24:72.24:0,72,1007	0/0:30,0:30:87.28:0,87,1203	0/0:21,0:21:63.21:0,63,881	0/0:31,0:31:93.31:0,93,1285	0/0:27,0:27:54.18:0,54,751	1/1:2,12:14:36.12:561,36,0	0/0:17,0:17:45.13:0,45,611	0/0:25,0:25:75.24:0,75,1027	0/0:30,0:30:90.30:0,90,1258	0/0:19,0:19:57.17:0,57,775	0/0:28,0:28:77.03:0,77,1070	0/0:13,0:13:39.13:0,39,545	0/0:24,0:24:72.24:0,72,1000	0/0:28,0:28:81.27:0,81,1126	0/0:31,0:31:93.31:0,93,1300	0/0:30,0:30:81.27:0,81,1132	0/0:28,0:28:72.23:0,72,985	0/0:15,0:15:45.15:0,45,629	0/0:36,0:36:96.29:0,96,1308	0/0:26,0:26:78.25:0,78,1073	0/0:31,0:31:93.23:0,93,1258	0/0:14,0:14:33.08:0,33,441
chr10	108631271	.	CGACA	C	2818.12	PASS	AB=0.957;AC=10;AF=0.179;AN=56;BaseQRankSum=11.511;DP=777;FS=1.574;HRun=0;HaplotypeScore=126.0522;InbreedingCoeff=0.5232;MQ=72.27;MQ0=5;MQRankSum=1.712;QD=13.42;ReadPosRankSum=1.300;VQSLOD=3.4314;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,37:53:93.32:1481,93,0	0/0:9,0:10:9.03:0,9,155	0/0:43,0:28:21.07:0,21,398	0/0:35,0:30:27.23:0,27,511	0/0:31,0:31:54.12:0,54,1102	0/0:26,0:26:51.18:0,51,1195	0/1:32,2:34:29.31:29,0,1282	0/0:29,0:29:30.09:0,30,575	0/0:27,0:27:63.22:0,63,1459	0/0:32,0:32:51.17:0,51,1177	0/1:16,0:16:1.37:1,0,683	0/0:18,0:30:30.05:0,30,491	0/0:10,0:10:21.07:0,21,496	0/1:18,1:19:17.66:18,0,563	0/0:33,0:33:42.28:0,42,1450	0/0:35,0:35:66.23:0,66,1550	1/1:12,18:30:39.13:621,39,0	1/1:9,19:28:32.94:791,33,0	0/0:22,0:22:30.08:0,30,648	0/0:15,0:15:33.11:0,33,762	0/0:34,0:34:57.20:0,57,1340	0/0:29,0:29:54.17:0,54,1202	0/0:21,0:21:39.13:0,39,828	0/0:36,2:38:39.52:0,40,1940	0/0:22,1:23:6.41:0,6,1096	0/1:27,2:29:35.33:35,0,1170	0/0:25,0:25:57.20:0,57,1351	0/0:18,0:18:36.12:0,36,808
chr10	108632029	.	C	CCT	164.10	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.366;DP=1071;FS=0.000;HRun=0;HaplotypeScore=145.1138;InbreedingCoeff=0.9839;MQ=61.34;MQ0=5;MQRankSum=1.369;QD=20.51;ReadPosRankSum=-0.194;VQSLOD=3.9195;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,126,1695	1/1:0,8:8:15.05:253,15,0	0/0:45,0:17:36.92:0,37,399	0/0:45,0:28:53.64:0,54,616	0/0:24,0:24:60.18:0,60,821	0/0:29,0:29:72.06:0,72,949	0/0:47,0:47:99:0,132,1777	0/0:45,0:45:99:0,126,1635	0/0:41,0:41:99:0,114,1453	0/0:36,0:36:99:0,102,1347	0/0:17,0:17:48.11:0,48,616	0/0:43,0:43:99:0,117,1619	0/0:34,0:34:92.64:0,93,1233	0/0:43,0:43:99:0,111,1482	0/0:33,0:33:93.25:0,93,1229	0/0:29,0:29:81.22:0,81,1079	0/0:34,0:34:85.84:0,86,1144	0/0:45,0:45:99:0,120,1564	0/0:27,0:26:69.16:0,69,898	0/0:29,0:29:78.22:0,78,1040	0/0:148,0:148:99:0,370,4925	0/0:33,0:33:93.24:0,93,1241	0/0:24,0:24:72.21:0,72,972	0/0:57,0:57:99:0,147,2015	0/0:23,0:23:63.15:0,63,812	0/0:41,0:41:99:0,108,1391	0/0:21,0:21:54.15:0,54,735	0/0:19,0:19:51.15:0,51,695
chr10	108632083	.	AGT	A	111.83	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.181;DP=998;FS=4.397;HRun=0;HaplotypeScore=143.7361;InbreedingCoeff=0.9887;MQ=56.97;MQ0=10;MQRankSum=0.263;QD=15.98;ReadPosRankSum=-1.087;VQSLOD=3.5090;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,114,1866	1/1:3,4:7:18.02:202,18,0	0/0:43,0:15:24.01:0,24,316	0/0:61,0:37:73.03:0,73,1054	0/0:25,0:25:69.21:0,69,1082	0/0:26,0:26:57.18:0,57,942	0/0:37,0:37:90.28:0,90,1459	0/0:42,0:41:93.29:0,93,1482	0/0:42,0:42:99:0,102,1656	0/0:34,0:33:81.17:0,81,1260	0/0:18,0:18:30.10:0,30,503	0/0:44,0:44:48.93:0,49,802	0/0:37,0:37:99:0,102,1696	0/0:41,0:41:99:0,111,1830	0/0:34,0:34:93.28:0,93,1503	0/0:23,0:23:54.18:0,54,911	0/0:33,0:32:32.07:0,32,1087	0/0:35,0:35:92.19:0,92,1503	0/0:33,0:33:75.20:0,75,1159	0/0:19,0:18:42.12:0,42,643	0/0:117,0:116:99:0,195,3626	0/0:26,0:26:69.24:0,69,1161	0/0:24,0:23:60.18:0,60,975	0/0:57,0:57:99:0,138,2252	0/0:23,0:23:60.19:0,60,1016	0/0:33,0:33:84.29:0,84,1424	0/0:20,0:19:38.64:0,39,544	0/0:17,0:17:34.35:0,34,658
chr10	108632106	.	ATGTGTGTGAG	A	58.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.761;DP=997;FS=1.846;HRun=0;HaplotypeScore=278.4714;InbreedingCoeff=0.6103;MQ=52.99;MQ0=37;MQRankSum=-4.086;QD=1.32;ReadPosRankSum=-2.595;VQSLOD=1.5115;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,110,3106	0/0:6,0:4:8.69:0,9,69	0/0:31,0:5:5.96:0,6,44	0/0:43,0:14:1.53:0,2,27	0/0:27,0:27:65.94:0,66,2064	0/0:25,0:25:47.75:0,48,1293	0/0:37,0:36:67.27:0,67,1235	0/0:48,0:39:69.06:0,69,894	0/0:43,0:42:91.12:0,91,2638	0/0:36,0:31:56.26:0,56,1604	0/0:13,0:13:30.04:0,30,605	1/1:15,29:44:6.02:138,6,0	0/0:40,0:40:87.71:0,88,2433	0/0:38,0:38:78.15:0,78,2444	0/0:43,0:43:87.14:0,87,2411	0/0:22,0:22:51.97:0,52,1487	0/0:32,0:31:49.59:0,50,1918	0/0:39,0:39:82.61:0,83,1799	0/0:29,0:24:36.02:0,36,830	0/0:20,0:17:22.86:0,23,452	0/0:107,0:102:99:0,119,1756	0/0:33,0:31:69.21:0,69,2428	0/0:27,0:26:41.87:0,42,1151	0/0:55,0:55:99:0,117,3349	0/0:26,0:26:53.82:0,54,1285	0/0:37,0:36:60.19:0,60,1232	0/0:17,0:15:20.65:0,21,301	0/0:18,0:18:33.37:0,33,510
chr10	108632121	.	TGTGA	T	330.72	PASS	AB=0.927;AC=7;AF=0.125;AN=56;BaseQRankSum=6.838;DP=923;FS=2.226;HRun=0;HaplotypeScore=167.2108;InbreedingCoeff=0.0680;MQ=52.69;MQ0=37;MQRankSum=-6.867;QD=2.00;ReadPosRankSum=-2.866;VQSLOD=2.2254;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,111,1807	0/0:8,0:6:8.67:0,9,69	0/0:17,0:2:5.96:0,6,44	0/0:26,0:5:1.53:0,2,27	0/0:27,0:27:68.92:0,69,1293	0/0:25,0:25:50.45:0,50,794	0/0:43,0:42:56.58:0,57,1216	0/1:43,1:33:51.03:51,0,711	0/0:47,0:46:54.66:0,55,1932	0/0:33,0:28:73.54:0,74,1232	0/0:12,0:12:32.21:0,32,366	1/1:34,0:34:3.89:35,4,0	0/0:39,0:39:98.46:0,98,1682	0/0:36,0:36:89.75:0,90,1542	0/0:43,0:43:99:0,102,1912	0/0:23,0:23:27.25:0,27,1047	0/0:29,0:29:55.87:0,56,1195	0/0:37,0:37:66.83:0,67,1048	0/0:24,0:17:47.54:0,48,558	0/1:17,1:15:96.83:97,0,208	0/0:100,0:95:99:0,119,1189	0/0:32,0:31:75.12:0,75,1398	0/0:24,0:22:50.85:0,51,869	0/0:51,0:51:99:0,116,2363	0/0:26,0:26:68.89:0,69,1255	0/1:32,1:32:99:104,0,578	0/1:16,0:14:16.25:16,0,100	0/1:13,7:20:99:154,0,268
chr10	108632125	.	A	AGTGTGT	1627.72	PASS	AB=0.856;AC=16;AF=0.320;AN=50;BaseQRankSum=1.825;DP=920;FS=7.050;HRun=0;HaplotypeScore=193.2761;InbreedingCoeff=0.6268;MQ=52.84;MQ0=35;MQRankSum=-7.032;QD=4.34;ReadPosRankSum=-6.382;VQSLOD=-0.3403;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:52:5.85:6,0,237	./.	./.	./.	0/0:24,0:24:39.12:0,39,721	0/0:20,0:23:26.55:0,27,464	0/0:37,0:43:43.88:0,44,704	1/1:45,0:34:22.90:152,23,0	0/0:46,0:49:56.63:0,57,1278	0/0:31,0:25:24.10:0,24,644	0/0:10,0:12:11.25:0,11,172	0/1:33,0:33:15.57:16,0,67	0/0:37,0:38:46.06:0,46,907	0/0:33,0:35:56.72:0,57,1007	0/0:36,0:44:81:0,81,1389	0/1:22,0:24:0.14:0,0,680	0/0:17,0:29:26.87:0,27,329	0/0:25,0:37:12.15:0,12,130	1/1:24,1:19:10.36:134,10,0	1/1:12,5:16:11.24:239,11,0	1/1:60,34:100:4.31:41,4,0	0/0:26,0:32:48.15:0,48,867	0/0:23,0:22:33.09:0,33,606	0/0:50,0:50:66.53:0,67,1262	0/0:27,0:27:45.14:0,45,841	0/1:25,8:35:24.20:497,0,24	1/1:11,5:16:11.54:221,12,0	1/1:17,0:18:23.97:494,24,0
chr10	108634122	.	AACACACACACACACAC	A	5345.31	PASS	AC=18;AF=0.346;AN=52;BaseQRankSum=8.363;DP=507;FS=4.768;HRun=0;HaplotypeScore=213.3554;InbreedingCoeff=0.9346;MQ=66.71;MQ0=7;MQRankSum=-7.744;QD=28.13;ReadPosRankSum=1.241;VQSLOD=3.7739;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:28:27.09:764,27,0	0/0:5,0:8:12.66:0,13,470	0/0:29,0:19:9.03:0,9,322	0/0:36,0:32:24.03:0,24,905	0/0:15,0:15:15.05:0,15,1033	0/0:25,0:25:36.11:0,36,2030	0/0:18,0:20:39.12:0,39,2116	1/1:19,0:18:15.02:160,15,0	0/0:14,0:16:27.09:0,27,1760	0/0:16,0:15:27.08:0,27,1596	0/0:8,0:8:18.06:0,18,1253	1/1:10,0:19:21.07:516,21,0	0/0:11,0:11:18.04:0,18,1053	0/0:16,0:16:18.06:0,18,1080	0/0:13,0:17:36.12:0,36,2441	0/0:13,0:13:24.08:0,24,1728	1/1:18,0:26:15.05:501,15,0	./.	1/1:15,4:19:12.02:421,12,0	1/1:5,9:14:21.07:916,21,0	1/1:26,0:26:3.01:44,3,0	0/0:17,0:18:30.09:0,30,1768	0/0:11,0:11:24.08:0,24,1693	0/0:26,0:26:41.41:0,41,2517	0/0:11,0:11:15.05:0,15,889	1/1:15,11:27:29.02:1099,29,0	1/1:5,7:12:21.07:926,21,0	./.
chr10	108634454	.	A	AT	1706.29	PASS	AB=0.890;AC=22;AF=0.393;AN=56;BaseQRankSum=-4.533;DP=592;FS=0.916;HRun=14;HaplotypeScore=70.3610;InbreedingCoeff=0.2838;MQ=70.87;MQ0=2;MQRankSum=1.469;QD=5.56;ReadPosRankSum=-2.680;VQSLOD=1.8395;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:35,8:43:40.29:40,0,404	1/1:1,8:10:29.83:249,30,0	0/0:15,0:12:10.04:0,10,50	0/0:15,0:12:11.75:0,12,76	0/0:29,0:30:46.03:0,46,288	0/0:18,0:19:30.86:0,31,186	0/0:20,1:23:7.01:0,7,158	1/1:23,11:37:34.66:396,35,0	0/0:17,1:20:16.06:0,16,215	0/0:13,0:13:20.64:0,21,134	0/1:9,0:10:3.74:4,0,65	0/0:7,0:28:37.51:0,38,119	0/0:15,0:15:6.10:0,6,68	0/1:15,1:18:44.85:45,0,96	0/0:24,2:26:17.82:0,18,242	0/1:20,2:22:41.21:41,0,137	0/0:25,0:27:42.25:0,42,261	0/0:20,1:21:17.91:0,18,243	0/1:20,4:24:27.81:141,0,28	1/1:15,7:23:2.75:242,3,0	1/1:5,8:13:15.88:134,16,0	0/1:8,2:10:29.11:29,0,92	0/1:14,2:16:34.27:34,0,72	0/0:28,1:32:17.89:0,18,332	0/1:12,3:15:29.09:29,0,91	1/1:12,17:29:3.27:267,3,0	1/1:5,18:23:1.82:132,2,0	1/1:4,8:14:13.45:106,13,0
chr10	108635444	.	C	CA	48.68	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.862;DP=752;FS=5.927;HRun=2;HaplotypeScore=71.4787;InbreedingCoeff=0.9335;MQ=55.25;MQ0=22;MQRankSum=-2.802;QD=12.17;ReadPosRankSum=0.614;VQSLOD=2.0821;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,1269	1/1:0,4:4:9.03:132,9,0	0/0:37,0:18:48.13:0,48,596	0/0:41,0:19:47.80:0,48,560	0/0:17,0:16:45.15:0,45,580	0/0:24,0:24:66.21:0,66,849	0/0:33,0:33:87.28:0,87,1130	0/0:33,0:31:87.26:0,87,1114	0/0:23,0:23:66.21:0,66,856	0/0:25,0:25:72.23:0,72,922	0/0:10,0:10:27.09:0,27,346	0/0:26,0:26:78.25:0,78,1011	0/0:21,0:21:63.19:0,63,802	0/0:38,0:38:99:0,111,1440	0/0:16,0:16:48.16:0,48,623	0/0:25,0:25:75.23:0,75,960	0/0:44,0:44:99:0,126,1629	0/0:44,0:44:99:0,132,1694	0/0:20,0:14:42.14:0,42,545	0/0:7,0:7:21.07:0,21,273	0/0:63,0:63:99:0,172,2213	0/0:17,0:16:45.15:0,45,584	0/0:11,0:11:30.10:0,30,389	0/0:55,0:55:99:0,159,2048	0/0:26,0:25:72.23:0,72,934	0/0:25,0:25:72.23:0,72,923	0/0:16,0:16:45.15:0,45,584	0/0:15,0:15:42.14:0,42,543
chr10	108636682	.	GCCC	G	176.11	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.047;DP=717;FS=0.000;HRun=4;HaplotypeScore=101.1030;InbreedingCoeff=0.9825;MQ=88.42;MQ0=0;MQRankSum=-2.097;QD=35.22;ReadPosRankSum=1.747;VQSLOD=1.4208;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,2904	1/1:0,5:5:15.05:265,15,0	0/0:19,0:20:44.31:0,44,1103	0/0:32,0:32:85.13:0,85,1867	0/0:15,0:15:45.15:0,45,1044	0/0:15,0:15:45.15:0,45,1049	0/0:44,0:44:99:0,132,3099	0/0:38,0:38:99:0,114,2632	0/0:29,0:29:87.30:0,87,2059	0/0:29,0:29:87.30:0,87,2055	0/0:16,0:16:48.16:0,48,1113	0/0:29,0:29:87.30:0,87,2058	0/0:22,0:22:66.23:0,66,1554	0/0:19,0:19:57.20:0,57,1318	0/0:28,0:28:81.28:0,81,1916	0/0:22,0:22:66.22:0,66,1493	0/0:41,0:41:99:0,123,2909	0/0:26,0:26:78.27:0,78,1817	0/0:17,0:17:51.17:0,51,1139	0/0:16,0:16:48.16:0,48,1131	0/0:63,0:63:99:0,190,4447	0/0:18,0:18:54.19:0,54,1271	0/0:11,0:11:30.10:0,30,685	0/0:36,0:36:99:0,108,2555	0/0:29,0:29:84.29:0,84,1989	0/0:26,0:26:78.27:0,78,1842	0/0:21,0:21:63.22:0,63,1465	0/0:9,0:9:27.09:0,27,639
chr10	108637505	.	TG	T	64.64	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.124;DP=629;FS=12.862;HRun=7;HaplotypeScore=62.1234;InbreedingCoeff=0.8907;MQ=84.09;MQ0=0;MQRankSum=-0.404;QD=10.77;ReadPosRankSum=-0.292;VQSLOD=0.7761;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,126,1493	1/1:1,5:6:15.03:153,15,0	0/0:16,0:16:45.12:0,45,537	0/0:24,1:25:17.53:0,18,574	0/0:6,0:6:9.01:0,9,99	0/0:24,0:24:57.14:0,57,667	0/0:37,0:37:99:0,102,1244	0/0:19,0:19:33.10:0,33,404	0/0:27,0:27:69.18:0,69,823	0/0:12,0:12:21.06:0,21,254	0/0:4,0:4:12.04:0,12,150	0/0:28,0:28:81.22:0,81,972	0/0:22,0:22:63.20:0,63,791	0/0:20,0:20:54.17:0,54,679	0/0:24,0:24:69.22:0,69,868	0/0:23,0:23:69.20:0,69,842	0/0:37,0:37:99:0,99,1233	0/0:27,0:27:72.23:0,72,906	0/0:17,0:17:45.10:0,45,527	0/0:16,0:16:48.10:0,48,553	0/0:49,0:49:99:0,114,1369	0/0:22,0:22:51.13:0,51,612	0/0:15,0:15:30.07:0,30,352	0/0:21,0:21:60.17:0,60,731	0/0:23,0:23:69.14:0,69,809	0/0:25,0:25:51.12:0,51,595	0/0:26,0:26:72.16:0,72,852	0/0:12,0:12:36.09:0,36,438
chr10	108637856	.	T	TCTCTCC	2137.82	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.034;DP=665;FS=15.344;HRun=0;HaplotypeScore=138.2699;InbreedingCoeff=0.9816;MQ=88.14;MQ0=0;MQRankSum=-7.952;QD=66.81;ReadPosRankSum=-0.373;VQSLOD=3.2615;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,156,3588	1/1:1,6:8:15.05:532,15,0	0/0:24,0:23:56.54:0,57,1071	0/0:25,0:25:70.56:0,71,1360	0/0:19,0:19:48.16:0,48,1114	0/0:19,0:19:48.16:0,48,1135	0/0:32,0:32:96.32:0,96,2130	0/0:32,0:32:87.29:0,87,1934	0/0:29,0:29:87.29:0,87,1987	0/0:25,0:25:72.21:0,72,1550	0/0:7,0:7:15.05:0,15,355	1/1:3,17:24:51.17:1724,51,0	0/0:34,0:34:99:0,102,2384	0/0:21,0:21:63.22:0,63,1425	0/0:15,0:15:39.13:0,39,922	0/0:15,0:15:42.14:0,42,969	0/0:38,0:38:99:0,111,2622	0/0:29,0:29:87.26:0,87,2007	0/0:19,0:19:48.14:0,48,1086	0/0:24,0:24:69.24:0,69,1609	0/0:29,0:29:84.29:0,84,1906	0/0:18,0:18:54.08:0,54,1189	0/0:20,0:20:57.20:0,57,1319	0/0:26,0:26:72.25:0,72,1673	0/0:21,0:21:60.21:0,60,1415	0/0:32,0:32:90.30:0,90,2063	0/0:18,0:18:54.19:0,54,1275	0/0:7,0:7:21.07:0,21,470
chr10	108638723	.	TCGTCTGC	T	2709.97	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.389;DP=472;FS=2.190;HRun=0;HaplotypeScore=107.8948;InbreedingCoeff=0.9805;MQ=83.02;MQ0=0;MQRankSum=-9.345;QD=43.71;ReadPosRankSum=-1.696;VQSLOD=3.0971;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:57.20:1484,57,0	0/0:4,0:4:12.04:0,12,415	0/0:21,0:21:37.52:0,38,1707	0/0:22,0:22:56.93:0,57,1550	0/0:15,0:15:42.11:0,42,1519	0/0:16,0:16:48.16:0,48,1943	0/0:29,0:29:84.23:0,84,3211	0/0:27,0:27:78.16:0,78,2620	0/0:18,0:18:54.19:0,54,2103	0/0:14,0:14:42.14:0,42,1666	0/0:10,0:10:30.09:0,30,1130	0/0:15,0:15:42.14:0,42,1608	0/0:9,0:9:24.08:0,24,983	0/0:20,0:20:57.20:0,57,2277	0/0:26,0:26:78.27:0,78,3131	0/0:18,0:18:51.17:0,51,2026	1/1:0,19:19:30.10:803,30,0	1/1:0,14:14:21.07:565,21,0	0/0:16,0:16:45.15:0,45,1814	0/0:7,0:7:18.06:0,18,737	0/0:28,0:28:78.27:0,78,3115	0/0:9,0:9:27.09:0,27,1045	0/0:8,0:8:24.07:0,24,883	0/0:29,0:29:84.29:0,84,3388	0/0:17,0:17:51.18:0,51,2029	0/0:17,0:17:51.16:0,51,1876	0/0:7,0:7:21.07:0,21,815	0/0:8,0:8:24.08:0,24,982
chr10	108639422	.	G	GCA	6285.51	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.772;DP=575;FS=4.009;HRun=0;HaplotypeScore=95.0711;InbreedingCoeff=0.9331;MQ=71.09;MQ0=0;MQRankSum=-2.601;QD=45.55;ReadPosRankSum=0.016;VQSLOD=5.9972;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1631	0/0:6,0:6:18.06:0,18,294	0/0:6,0:7:17.58:0,18,259	0/0:9,0:9:1.87:0,2,253	0/0:20,0:20:60.20:0,60,979	0/0:15,0:15:42.14:0,42,685	0/0:37,0:37:99:0,111,1775	1/1:1,9:11:30.09:546,30,0	0/0:18,0:18:54.18:0,54,880	0/0:16,0:16:48.16:0,48,781	0/0:10,0:10:30.10:0,30,489	1/1:1,21:22:57.11:1103,57,0	0/0:29,0:29:84.29:0,84,1363	0/0:34,0:34:99:0,102,1640	0/0:19,0:19:57.19:0,57,923	0/0:31,0:31:93.32:0,93,1510	0/0:38,0:38:99:0,114,1823	0/0:33,0:33:99:0,99,1581	1/1:0,10:11:30.10:566,30,0	1/1:0,4:4:3.01:57,3,0	1/1:0,28:32:50.89:982,51,0	0/0:13,0:13:39.13:0,39,629	0/0:8,0:8:24.08:0,24,389	0/0:33,0:33:99:0,99,1581	0/0:26,0:26:75.23:0,75,1198	1/1:0,19:20:60.17:1069,60,0	1/1:0,25:24:66.23:1240,66,0	1/1:1,12:13:39.13:722,39,0
chr10	108640289	.	TAAA	T	2517.06	PASS	AB=0.677;AC=20;AF=0.357;AN=56;BaseQRankSum=2.017;DP=475;FS=10.497;HRun=16;HaplotypeScore=73.4968;InbreedingCoeff=0.7912;MQ=76.29;MQ0=6;MQRankSum=-1.727;QD=12.65;ReadPosRankSum=3.148;VQSLOD=0.5185;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,18:28:28.37:319,28,0	0/0:1,0:6:6.97:0,7,80	0/0:47,0:20:23.77:0,24,262	0/0:25,0:15:23.78:0,24,277	0/0:15,0:18:42.08:0,42,609	0/0:7,0:11:27.05:0,27,389	0/0:8,0:12:33.05:0,33,442	1/1:13,12:28:43.03:422,43,0	0/1:6,2:13:36.99:51,0,37	0/0:17,0:24:63.16:0,63,948	0/0:10,0:10:17.99:0,18,245	0/0:7,0:7:18.05:0,18,258	0/0:13,0:19:48.07:0,48,707	0/0:15,0:15:42.11:0,42,647	0/0:8,0:9:21.05:0,21,320	0/0:11,0:12:33.09:0,33,537	1/1:8,19:32:56.36:636,56,0	1/1:0,9:12:23.86:214,24,0	0/1:18,10:31:24.14:268,0,24	1/1:4,10:17:19.29:248,19,0	1/1:1,7:9:10.49:126,10,0	0/0:14,0:17:39.09:0,39,578	0/0:7,0:10:26.97:0,27,360	0/0:11,0:13:36.12:0,36,602	0/0:13,0:21:43.39:0,43,675	1/1:5,7:11:20.86:215,21,0	1/1:5,10:14:18.40:195,18,0	1/1:0,2:2:3.01:32,3,0
chr10	108643748	.	GTCCA	G	2480.54	PASS	AB=0.899;AC=17;AF=0.327;AN=52;BaseQRankSum=8.987;DP=713;FS=2.439;HRun=0;HaplotypeScore=117.0531;InbreedingCoeff=0.6853;MQ=63.63;MQ0=12;MQRankSum=0.470;QD=10.65;ReadPosRankSum=-0.461;VQSLOD=2.8897;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:48.13:0,48,1037	0/0:2,0:8:11.98:0,12,125	./.	./.	0/0:14,0:14:27.09:0,27,602	0/0:18,0:18:36.12:0,36,845	0/0:31,0:31:27.07:0,27,539	1/1:34,4:37:18.01:202,18,0	1/1:26,0:26:5.08:271,5,0	0/0:18,0:18:33.11:0,33,721	0/1:11,1:12:25.53:26,0,402	0/0:28,0:27:51.18:0,51,1177	0/0:18,0:18:36.10:0,36,742	0/0:31,0:31:51.18:0,51,1188	0/0:45,0:45:72.20:0,72,1534	0/0:30,0:30:51.17:0,51,1136	0/0:19,0:36:24.08:0,24,411	0/0:15,0:25:30.10:0,30,517	0/1:12,5:15:35.21:187,0,35	1/1:7,4:11:9.03:130,9,0	1/1:25,33:58:57.19:885,57,0	0/1:17,0:17:10.54:11,0,578	0/0:9,0:9:18.06:0,18,424	0/0:41,0:41:54.13:0,54,1192	0/0:15,0:15:30.09:0,30,658	1/1:10,14:24:42.13:628,42,0	1/1:13,7:20:11.63:186,12,0	1/1:7,3:10:9.03:140,9,0
chr10	108643791	.	CATCT	C	1079.53	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=11.397;DP=659;FS=1.638;HRun=0;HaplotypeScore=106.6413;InbreedingCoeff=0.1218;MQ=71.60;MQ0=9;MQRankSum=-0.490;QD=7.29;ReadPosRankSum=2.501;VQSLOD=2.3439;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,1743	0/0:9,0:9:15.01:0,15,197	0/0:23,0:19:57.05:0,57,607	0/0:29,0:24:65.99:0,66,665	0/0:17,0:17:51.03:0,51,866	0/0:18,0:18:51.10:0,51,1108	0/0:26,0:26:75.04:0,75,1052	0/0:38,0:37:22.14:0,22,704	1/1:2,20:22:27.09:519,27,0	0/0:22,0:21:63.03:0,63,1101	0/0:16,0:15:20.38:0,20,645	0/0:27,0:27:78.03:0,78,1616	0/0:19,0:19:49.33:0,49,947	0/0:26,0:26:78.11:0,78,1578	0/0:33,0:33:93.20:0,93,1972	0/0:25,0:25:75.12:0,75,1447	0/0:28,0:28:50.89:0,51,717	0/0:25,0:25:65.98:0,66,927	0/1:19,0:17:46.20:46,0,297	0/1:13,0:12:38.54:39,0,145	0/1:54,0:54:99:296,0,350	0/0:21,0:21:41.23:0,41,877	0/0:9,0:9:23.84:0,24,542	0/0:40,0:40:99:0,117,1940	0/0:18,0:18:54.06:0,54,964	0/1:22,0:21:99:206,0,121	0/1:12,0:12:67.67:68,0,95	0/1:6,0:6:47.93:48,0,52
chr10	108644951	.	GGTGTGTGTGTGTGTGTGTGTGT	G	921.59	PASS	AB=0.731;AC=5;AF=0.089;AN=56;BaseQRankSum=4.381;DP=725;FS=3.600;HRun=0;HaplotypeScore=351.1635;InbreedingCoeff=0.4953;MQ=63.92;MQ0=16;MQRankSum=-4.308;QD=12.29;ReadPosRankSum=-0.655;VQSLOD=1.4380;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,12:32:3.01:174,3,0	0/0:11,0:11:21.06:0,21,555	0/0:31,0:23:5.99:0,6,98	0/0:29,0:18:2.19:0,2,106	0/0:25,0:24:27.15:0,27,1686	0/0:25,0:25:39.56:0,40,2141	0/0:25,0:24:30.56:0,31,1362	0/0:26,0:26:15.05:0,15,565	0/0:17,0:31:30.05:0,30,1130	0/0:29,0:28:42.14:0,42,3101	0/0:14,0:11:9.03:0,9,560	0/0:31,0:31:46.71:0,47,2928	0/0:14,0:17:24.08:0,24,1760	0/0:29,0:29:33.11:0,33,2578	0/0:37,0:40:54.19:0,54,3871	0/0:29,0:29:41.17:0,41,2768	1/1:18,5:21:6.02:347,6,0	0/1:12,7:19:16.12:509,0,16	0/0:28,0:27:24.08:0,24,1022	0/0:10,0:12:9.02:0,9,287	0/0:53,0:52:39.12:0,39,1695	0/0:28,0:28:42.14:0,42,2536	0/0:18,0:18:21.07:0,21,1252	0/0:38,0:41:66.23:0,66,4561	0/0:26,0:26:51.18:0,51,3415	0/0:22,0:21:27.05:0,27,1108	0/0:13,0:19:19.88:0,20,803	0/0:7,0:7:9.03:0,9,499
chr10	108645261	.	TGTGTGTGTGTGG	T	3667.91	PASS	AB=0.992;AC=15;AF=0.268;AN=56;BaseQRankSum=8.782;DP=1057;FS=3.008;HRun=0;HaplotypeScore=390.6842;InbreedingCoeff=0.5424;MQ=55.78;MQ0=25;MQRankSum=-1.295;QD=9.17;ReadPosRankSum=-4.485;VQSLOD=0.3898;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:55,0:53:15.01:15,0,2045	0/0:14,0:14:18.03:0,18,177	0/0:49,0:23:16.44:0,16,304	0/1:50,0:28:38.63:39,0,562	0/0:36,0:34:75.20:0,75,2993	0/0:22,0:21:51.10:0,51,1621	0/0:29,0:29:57.11:0,57,2299	0/1:41,0:40:3.12:460,0,3	0/1:46,0:46:3.25:3,0,3521	0/0:44,0:42:99:0,111,3485	0/0:33,0:32:75.22:0,75,2968	0/0:41,0:41:99:0,102,4410	0/0:43,0:43:99:0,111,4228	0/0:51,0:49:99:0,123,4337	0/0:54,0:53:99:0,142,5486	0/0:43,0:43:99:0,116,5095	0/0:35,0:35:50.03:0,50,2419	0/0:22,0:22:2.24:0,2,1405	1/1:28,0:26:20.09:492,20,0	1/1:27,0:25:29.68:454,30,0	1/1:84,0:83:0.97:605,1,0	0/0:39,0:38:96.68:0,97,3531	0/0:19,0:19:38.84:0,39,1620	0/0:60,0:60:99:0,153,6027	0/0:23,0:22:54.16:0,54,1881	1/1:35,3:38:28.85:1092,29,0	0/1:22,1:22:2.75:412,0,3	1/1:8,0:8:6.02:96,6,0
chr10	108645263	.	TGTGTGTGTGG	T	6719.29	PASS	AB=0.884;AC=16;AF=0.286;AN=56;BaseQRankSum=6.295;DP=1059;FS=0.324;HRun=0;HaplotypeScore=343.2052;InbreedingCoeff=0.6613;MQ=55.37;MQ0=28;MQRankSum=-1.522;QD=16.97;ReadPosRankSum=-4.187;VQSLOD=2.3935;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:54,0:53:48.08:48,0,1407	0/0:15,0:15:9.53:0,10,39	0/0:47,0:21:16.44:0,16,282	0/1:50,0:27:45.74:46,0,452	0/0:35,0:33:78.20:0,78,2639	0/0:23,0:22:54.11:0,54,1534	0/0:31,0:31:63.13:0,63,2176	1/1:4,36:38:96.17:929,96,0	0/1:46,0:46:3.26:3,0,2743	0/0:47,0:45:99:0,120,3283	0/0:33,0:31:78.23:0,78,2673	0/0:39,0:39:99:0,102,3841	0/0:41,0:41:99:0,117,3801	0/0:51,0:49:99:0,126,3802	0/0:56,0:55:99:0,145,4803	0/0:42,0:42:99:0,116,4369	0/0:38,0:38:53.19:0,53,1882	0/0:23,0:23:5.22:0,5,1123	1/1:6,21:25:48.66:906,49,0	1/1:6,21:25:30.10:858,30,0	1/1:76,5:80:93.18:1244,93,0	0/0:39,0:38:96.48:0,96,2873	0/0:16,0:16:38.82:0,39,1357	0/0:61,0:61:99:0,156,5208	0/0:25,0:24:60.18:0,60,1728	1/1:9,31:39:85.41:1725,85,0	0/1:3,20:23:2.91:770,0,3	1/1:0,8:8:6.02:190,6,0
chr10	108645267	.	TGTGTGG	T	4805.57	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=9.849;DP=1056;FS=0.625;HRun=0;HaplotypeScore=276.4333;InbreedingCoeff=0.5445;MQ=54.29;MQ0=35;MQRankSum=-3.244;QD=9.19;ReadPosRankSum=-5.230;VQSLOD=2.7391;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:56,0:55:99:245,0,407	1/1:1,12:13:18.06:381,18,0	0/1:52,0:22:6.76:7,0,280	0/1:50,0:27:75.86:76,0,317	0/0:36,0:34:84.18:0,84,1977	0/0:21,0:20:54.11:0,54,1180	0/0:27,0:27:63.12:0,63,1570	1/1:38,0:36:84.28:734,84,0	0/1:46,0:46:32.81:33,0,1461	0/0:48,0:45:99:0,101,2412	0/0:32,0:30:79.10:0,79,1941	0/0:38,0:38:99:0,105,2732	0/0:42,0:42:99:0,114,2666	0/0:49,0:47:99:0,129,2685	0/0:56,0:55:99:0,151,3488	0/0:42,0:42:99:0,116,2996	0/1:40,0:40:47.25:47,0,802	0/1:21,0:21:36.25:36,0,543	1/1:30,0:25:61.27:593,61,0	1/1:27,0:25:30.02:408,30,0	1/1:78,0:77:91.50:798,91,0	0/0:38,0:37:96.42:0,96,1998	0/0:17,0:17:41.74:0,42,1019	0/0:63,0:63:99:0,165,3701	0/0:24,0:23:53.20:0,53,1297	1/1:39,0:38:77.34:971,77,0	1/1:24,0:22:25.26:384,25,0	1/1:9,0:8:6.02:93,6,0
chr10	108645271	.	TGG	T	4430.90	PASS	AB=0.969;AC=24;AF=0.429;AN=56;BaseQRankSum=12.490;DP=1059;FS=8.236;HRun=3;HaplotypeScore=207.3086;InbreedingCoeff=0.5533;MQ=53.56;MQ0=37;MQRankSum=-4.043;QD=8.28;ReadPosRankSum=-3.132;VQSLOD=-0.2105;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:59,0:58:15.63:455,16,0	1/1:12,0:12:17.80:122,18,0	0/1:50,0:19:8.29:8,0,256	0/1:49,0:26:99:135,0,215	0/0:39,0:37:64.49:0,64,1123	0/0:22,0:21:46.92:0,47,666	0/0:29,0:29:75.52:0,76,986	1/1:37,0:35:93.66:733,94,0	0/1:39,7:46:99:577,0,201	0/0:47,0:43:6.84:0,7,1161	0/0:32,0:30:47.39:0,47,1015	0/0:41,0:41:78.30:0,78,1508	0/0:44,0:44:36.58:0,37,1450	0/0:49,0:47:99:0,107,1626	0/0:58,0:57:99:0,125,1995	0/0:40,0:40:99:0,110,1745	0/1:39,0:39:12.72:185,0,13	0/1:21,0:21:35.65:96,0,36	1/1:26,0:22:63.71:439,64,0	1/1:24,0:22:29.28:176,29,0	1/1:74,0:73:95.74:747,96,0	0/0:39,0:38:46.43:0,46,938	0/0:19,0:19:19.54:0,20,505	0/0:65,0:65:99:0,148,2201	0/1:25,0:24:7.52:8,0,492	1/1:36,0:35:81.76:552,82,0	1/1:24,0:22:22.49:158,22,0	1/1:9,0:8:5.91:37,6,0
chr10	108645273	.	GGT	G	642.63	PASS	AB=0.955;AC=18;AF=0.321;AN=56;BaseQRankSum=8.742;DP=1070;FS=0.445;HRun=0;HaplotypeScore=220.5180;InbreedingCoeff=0.2485;MQ=53.40;MQ0=39;MQRankSum=-4.733;QD=1.46;ReadPosRankSum=2.389;VQSLOD=2.4998;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:59:59.03:0,59,492	1/1:12,0:12:13.72:62,14,0	0/0:54,0:19:9.20:0,9,81	0/0:50,0:26:11.85:0,12,93	0/0:40,0:38:68.21:0,68,970	0/0:21,1:21:3.97:0,4,505	0/0:31,0:31:57.63:0,58,830	0/0:37,0:35:1.98:0,2,22	0/1:44,0:44:71.11:71,0,692	0/1:45,1:42:36.02:36,0,774	0/0:33,0:31:37.97:0,38,811	0/0:40,1:41:28.07:0,28,1251	0/1:43,2:45:29.40:29,0,1057	0/1:46,4:48:27.25:27,0,973	0/1:52,5:57:23.40:23,0,1449	0/0:40,1:42:43.95:0,44,1226	0/0:23,0:37:56.72:0,57,478	0/0:13,0:21:41.58:0,42,330	1/1:27,0:22:13.70:64,14,0	1/1:24,0:22:21.74:99,22,0	0/0:77,0:76:17.49:0,17,112	0/1:37,3:39:99:121,0,543	0/0:19,0:19:36.10:0,36,530	0/0:60,5:65:17.91:0,18,1622	0/1:22,2:24:52.80:53,0,470	0/1:36,0:35:25.59:121,0,26	1/1:24,0:22:8.40:89,8,0	1/1:9,0:8:5.60:26,6,0
chr10	108647495	.	C	CA	3816.52	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-9.740;DP=631;FS=0.000;HRun=9;HaplotypeScore=60.9647;InbreedingCoeff=0.9986;MQ=75.84;MQ0=0;MQRankSum=0.126;QD=23.56;ReadPosRankSum=-4.666;VQSLOD=2.3010;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:79.02:0,79,700	0/0:9,0:9:23.99:0,24,208	0/0:18,0:17:27.59:0,28,286	0/0:14,0:14:26.95:0,27,223	0/0:25,0:25:59.96:0,60,521	0/0:12,0:12:32.99:0,33,287	0/0:31,0:31:86.98:0,87,755	1/1:5,31:36:63.68:854,64,0	0/0:25,0:25:56.96:0,57,495	0/0:19,0:19:50.98:0,51,443	0/0:18,0:18:44.99:0,45,391	0/0:24,0:24:50.97:0,51,442	0/0:22,0:22:65.99:0,66,573	0/0:33,0:33:86.96:0,87,755	0/0:21,0:21:44.97:0,45,391	0/0:18,0:18:44.98:0,45,390	0/0:34,0:36:99:0,106,881	0/0:16,0:16:41.99:0,42,365	1/1:2,20:22:60.16:663,60,0	1/1:4,10:14:27.96:299,28,0	1/1:4,30:35:72.19:796,72,0	0/0:22,0:22:56.98:0,57,494	0/0:15,0:15:44.99:0,45,390	0/0:39,0:39:95.95:0,96,833	0/0:22,0:22:56.98:0,57,495	1/1:4,21:25:46.89:607,47,0	1/1:5,9:14:24.06:265,24,0	1/1:2,14:16:30.08:332,30,0
chr10	108651203	.	TAC	T	465.71	PASS	AB=0.900;AC=9;AF=0.161;AN=56;BaseQRankSum=4.652;DP=869;FS=1.292;HRun=0;HaplotypeScore=135.5661;InbreedingCoeff=0.0686;MQ=62.34;MQ0=7;MQRankSum=1.628;QD=2.29;ReadPosRankSum=0.984;VQSLOD=2.6639;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:55,1:55:52.60:0,53,1130	1/1:7,10:18:29.91:307,30,0	0/0:25,0:20:8.82:0,9,101	0/0:39,1:33:12.03:0,12,163	0/1:14,3:17:64.89:65,0,355	0/0:34,0:36:48.14:0,48,696	0/0:33,2:34:8.79:0,9,685	0/0:24,0:24:22.85:0,23,151	0/0:17,0:32:3.41:0,3,18	0/0:45,2:47:18.28:0,18,1215	0/1:18,1:19:3.56:4,0,355	0/0:37,3:40:10.57:0,11,967	0/1:21,7:29:99:137,0,359	0/0:25,0:25:20.14:0,20,700	0/1:30,3:33:43.65:44,0,530	0/1:38,2:42:3.08:3,0,860	0/0:27,0:27:22.55:0,23,746	0/1:19,1:20:1.99:2,0,591	0/0:29,0:29:21.88:0,22,131	0/0:15,0:23:3:0,3,25	0/0:38,0:37:14.68:0,15,114	0/0:33,0:33:58.44:0,58,848	0/1:22,3:25:36.45:36,0,486	0/0:41,2:43:38.43:0,38,877	0/0:37,0:36:54.61:0,55,785	0/0:16,0:31:33.40:0,33,269	0/0:24,0:35:31.76:0,32,199	0/0:8,0:8:11.75:0,12,73
chr10	108652501	.	CCTCACACA	C	509.63	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.263;DP=523;FS=12.331;HRun=0;HaplotypeScore=114.9176;InbreedingCoeff=0.8251;MQ=71.76;MQ0=4;MQRankSum=-3.283;QD=6.80;ReadPosRankSum=0.655;VQSLOD=1.6219;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:30:2.90:16,3,0	0/0:6,0:6:18.01:0,18,220	0/0:19,0:17:43.25:0,43,430	0/0:18,0:15:38.07:0,38,384	0/0:17,0:17:42.02:0,42,790	0/0:19,0:19:47.74:0,48,1039	0/0:27,0:27:80.96:0,81,990	0/0:22,0:21:59.43:0,59,603	0/0:19,0:19:50.28:0,50,554	0/0:18,0:18:50.50:0,51,1041	0/0:10,0:10:20.80:0,21,381	0/0:15,0:15:44.80:0,45,857	0/0:22,0:22:63.01:0,63,1135	0/0:22,0:22:63.07:0,63,1643	0/0:17,0:17:47.37:0,47,695	0/0:15,0:15:45.05:0,45,951	1/1:21,3:25:5.89:431,6,0	1/1:0,18:18:5.60:174,6,0	0/0:13,0:13:13.05:0,13,353	0/0:15,0:15:41.97:0,42,763	0/0:44,0:44:99:0,114,2750	0/0:19,0:19:45:0,45,901	0/0:8,0:8:23.99:0,24,554	0/0:23,0:23:60.04:0,60,1429	0/0:13,0:13:30.03:0,30,687	0/0:20,0:20:56.99:0,57,922	0/0:20,0:18:48.05:0,48,990	0/0:7,0:7:21.02:0,21,666
chr10	108652503	.	TCACA	T	222.18	PASS	AB=0.963;AC=7;AF=0.140;AN=50;BaseQRankSum=4.250;DP=541;FS=29.799;HRun=0;HaplotypeScore=80.6550;InbreedingCoeff=0.3355;MQ=69.67;MQ0=5;MQRankSum=-1.042;QD=2.34;ReadPosRankSum=1.976;VQSLOD=-0.3209;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:6:1.55:0,2,4	./.	./.	0/1:14,0:14:6.93:7,0,157	0/0:20,0:20:17.73:0,18,403	0/0:27,0:27:9.03:0,9,171	0/0:22,0:21:2.97:0,3,20	1/1:14,6:20:11.70:184,12,0	0/0:19,0:19:18.06:0,18,336	0/0:9,0:9:5.53:0,6,140	0/1:14,0:16:28.30:28,0,192	0/0:24,0:24:18.06:0,18,304	0/0:21,0:21:33.08:0,33,531	0/0:14,0:16:15.05:0,15,231	0/0:18,0:18:27.08:0,27,474	0/1:27,0:26:26.58:71,0,27	1/1:18,0:18:5.74:55,6,0	0/0:12,0:12:3:0,3,28	0/0:16,0:16:12.04:0,12,199	0/0:46,0:46:56.82:0,57,891	0/0:20,0:20:18.04:0,18,322	0/0:8,0:8:12.03:0,12,178	0/0:25,0:24:30.08:0,30,550	0/0:10,0:15:15.05:0,15,251	0/0:23,0:23:18.02:0,18,279	0/0:18,0:19:14.77:0,15,218	0/0:7,0:7:15.03:0,15,220
chr10	108653443	.	TAC	T	291.73	PASS	AB=0.913;AC=11;AF=0.204;AN=54;BaseQRankSum=0.087;DP=449;FS=0.851;HRun=0;HaplotypeScore=57.9163;InbreedingCoeff=-0.1061;MQ=58.99;MQ0=10;MQRankSum=2.720;QD=1.70;ReadPosRankSum=1.105;VQSLOD=1.4760;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,7:28:9.02:99,9,0	0/0:4,0:5:6:0,6,53	0/0:33,0:23:1.25:0,1,3	./.	0/0:6,0:6:3.01:0,3,45	0/1:3,2:5:27.03:27,0,35	0/0:19,0:19:14.92:0,15,164	0/0:13,0:13:2.96:0,3,19	0/0:20,0:19:30.03:0,30,334	0/0:13,0:13:12.04:0,12,180	0/0:10,0:10:6.02:0,6,89	0/1:10,1:10:11.09:11,0,249	0/1:13,0:13:25.80:26,0,160	0/1:21,0:21:11.83:12,0,243	0/1:16,3:19:42.01:42,0,245	0/1:16,0:16:35.35:35,0,203	0/1:22,6:29:69.14:69,0,256	0/1:21,2:23:96.05:96,0,189	0/0:10,0:10:8.96:0,9,70	0/0:11,0:11:20.99:0,21,196	0/0:25,0:27:20.69:0,21,199	0/0:8,0:8:5.61:0,6,55	0/0:4,0:4:5.97:0,6,64	0/0:25,2:27:8.98:0,9,446	0/1:7,0:7:16.09:16,0,61	0/0:10,0:14:20.92:0,21,215	0/0:15,0:19:33.01:0,33,319	0/0:7,0:12:18.33:0,18,153
chr10	108653560	.	GA	G	7806.20	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=9.703;DP=588;FS=1.402;HRun=3;HaplotypeScore=62.5625;InbreedingCoeff=0.9883;MQ=80.81;MQ0=0;MQRankSum=-3.203;QD=31.86;ReadPosRankSum=4.099;VQSLOD=4.9682;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:99:1229,101,0	1/1:0,8:8:18.06:223,18,0	0/0:42,0:41:99:0,113,1468	0/0:17,0:17:51.06:0,51,654	0/0:18,0:18:54.13:0,54,737	0/0:21,0:21:60.17:0,60,812	0/0:27,0:27:78.21:0,78,1082	1/1:0,14:14:39.12:482,39,0	1/1:0,16:16:45.14:557,45,0	0/0:25,0:25:75.25:0,75,1065	0/0:16,0:16:48.12:0,48,667	0/0:12,0:12:36.11:0,36,498	0/0:18,0:18:54.17:0,54,762	0/0:19,0:19:57.19:0,57,819	0/0:12,0:12:36.11:0,36,501	0/0:22,0:22:63.15:0,63,832	1/1:0,32:32:84.26:1040,84,0	1/1:1,23:24:60.19:743,60,0	1/1:2,7:9:24.07:285,24,0	1/1:1,27:28:72.07:837,72,0	1/1:0,22:22:51.16:631,51,0	0/0:22,0:22:63.21:0,63,906	0/0:24,0:24:72.22:0,72,1002	0/0:31,0:31:93.30:0,93,1320	0/0:17,0:17:51.11:0,51,675	1/1:1,16:17:7.87:518,8,0	1/1:0,21:21:54.17:668,54,0	1/1:0,16:16:48.15:593,48,0
chr10	108653671	.	C	CTG	2214.86	PASS	AB=0.845;AC=11;AF=0.196;AN=56;BaseQRankSum=-4.142;DP=635;FS=11.862;HRun=0;HaplotypeScore=92.5401;InbreedingCoeff=-0.0546;MQ=66.42;MQ0=11;MQRankSum=-1.405;QD=7.66;ReadPosRankSum=-1.618;VQSLOD=2.1175;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,20:52:99:290,0,102	0/0:4,0:5:8.39:0,8,78	0/1:40,0:25:13.97:14,0,24	0/0:39,0:15:8.04:0,8,62	0/0:16,0:16:15.04:0,15,171	0/0:22,0:23:32.91:0,33,349	0/0:20,0:23:47.91:0,48,498	0/1:24,0:23:12.69:160,0,13	0/1:7,10:18:15.77:380,0,16	0/0:19,0:20:17.37:0,17,177	0/0:13,0:15:14.83:0,15,129	0/0:16,0:20:24.36:0,24,308	0/0:11,0:11:21.04:0,21,230	0/0:23,0:23:51.11:0,51,565	0/0:11,0:13:3.86:0,4,159	0/0:7,0:8:18.05:0,18,207	0/1:14,24:40:66.69:782,0,67	0/1:7,9:16:58:340,0,58	0/1:20,0:20:95.29:95,0,97	0/0:14,0:14:2.96:0,3,19	1/1:25,3:26:20.96:200,21,0	0/1:18,0:19:46.72:47,0,163	0/0:9,0:9:2.99:0,3,24	0/0:42,0:46:91.30:0,91,910	0/0:21,0:25:38.76:0,39,389	0/1:28,0:28:13.73:57,0,14	0/0:17,0:17:19.78:0,20,79	0/0:16,0:16:13.76:0,14,63
chr10	108653694	.	TGTGCGTGC	T	2035.35	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=5.966;DP=579;FS=2.613;HRun=0;HaplotypeScore=136.8413;InbreedingCoeff=0.8172;MQ=53.27;MQ0=19;MQRankSum=-3.842;QD=15.08;ReadPosRankSum=-1.679;VQSLOD=2.8589;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:47.29:0,47,1348	0/0:6,0:6:9.03:0,9,238	0/0:32,0:8:8.92:0,9,133	0/0:37,0:10:15.05:0,15,271	0/0:11,0:11:27.09:0,27,865	0/0:22,0:22:54.16:0,54,1575	0/0:31,0:30:68.93:0,69,1855	1/1:28,0:25:42.16:616,42,0	0/0:18,0:18:35.71:0,36,1079	0/0:12,0:12:21.93:0,22,606	0/0:11,0:11:24.06:0,24,622	0/0:15,0:15:30.10:0,30,1023	0/0:12,0:12:33.10:0,33,913	0/0:20,0:20:48.13:0,48,1523	0/0:9,0:9:18.06:0,18,624	0/0:13,0:13:27.09:0,27,650	0/0:43,0:41:87.28:0,87,2906	0/0:16,0:16:42.13:0,42,1280	1/1:15,0:14:20.10:328,20,0	1/1:8,1:9:3.42:80,3,0	1/1:32,0:27:20.43:305,20,0	0/0:17,0:17:25.31:0,25,958	0/0:4,0:4:6.02:0,6,177	0/0:44,0:43:99:0,102,3176	0/0:22,0:22:57.20:0,57,2034	0/1:18,0:18:85.40:323,0,85	1/1:12,4:16:27.03:349,27,0	1/1:16,1:17:18.02:216,18,0
chr10	108653696	.	TGCGTGC	T	3531.06	PASS	AB=0.730;AC=12;AF=0.214;AN=56;BaseQRankSum=4.089;DP=575;FS=0.452;HRun=0;HaplotypeScore=113.6603;InbreedingCoeff=0.6443;MQ=54.06;MQ0=19;MQRankSum=-2.628;QD=25.96;ReadPosRankSum=-3.720;VQSLOD=2.3273;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:56.56:0,57,1181	0/0:4,0:4:12.04:0,12,233	0/0:33,0:9:17.21:0,17,311	0/0:39,0:10:23.56:0,24,300	0/0:11,0:11:30.10:0,30,797	0/0:22,0:22:57.20:0,57,1562	0/0:31,0:30:77.82:0,78,1893	1/1:4,24:25:41.28:950,41,0	0/0:16,0:16:38.68:0,39,773	0/0:10,0:10:24.05:0,24,629	0/0:11,0:11:27.06:0,27,606	0/0:15,0:15:26.66:0,27,937	0/0:13,0:13:33.10:0,33,886	0/0:20,0:20:54.15:0,54,1561	0/0:10,0:10:12.90:0,13,645	0/0:14,0:14:33.08:0,33,677	0/0:44,0:42:64.67:0,65,2276	0/0:16,0:16:45.08:0,45,1005	0/1:14,1:15:30.29:469,0,30	1/1:1,7:8:3.48:46,3,0	1/1:32,0:28:45.18:603,45,0	0/0:15,0:15:7.38:0,7,861	0/0:3,0:3:6.02:0,6,158	0/0:44,0:42:99:0,123,3074	0/0:22,0:22:60.20:0,60,1841	0/1:4,12:16:55.40:464,0,55	1/1:4,12:16:27.09:606,27,0	1/1:4,15:19:0.24:393,0,0
chr10	108661176	.	CTGTGTGTGTGTGTGTG	C	2907.66	PASS	AB=0.739;AC=11;AF=0.212;AN=52;BaseQRankSum=6.487;DP=793;FS=13.617;HRun=0;HaplotypeScore=308.0021;InbreedingCoeff=0.7395;MQ=63.97;MQ0=16;MQRankSum=-4.680;QD=15.55;ReadPosRankSum=-2.707;VQSLOD=0.7411;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:63.22:0,63,2663	./.	0/0:37,0:21:2.54:0,3,35	0/0:28,0:16:6.02:0,6,86	0/0:12,0:14:9.03:0,9,486	0/0:23,0:25:37.07:0,37,1967	0/0:35,0:34:42.67:0,43,2171	1/1:28,0:27:2.96:20,3,0	0/0:33,0:34:60.21:0,60,2855	0/0:27,0:25:49.71:0,50,2396	0/0:15,0:15:27.09:0,27,1811	0/0:27,0:27:33.58:0,34,1893	0/0:28,0:28:51.65:0,52,2662	0/0:18,0:19:18.89:0,19,1096	0/0:22,0:35:21.04:0,21,1139	0/0:21,0:21:24.08:0,24,1625	0/0:29,0:33:57.60:0,58,2498	0/0:27,0:28:48.16:0,48,1994	./.	1/1:19,16:35:22.58:802,23,0	1/1:50,0:48:9.27:129,9,0	0/0:25,0:25:27.56:0,28,1633	0/0:21,0:21:39.13:0,39,2506	0/0:45,0:49:78.46:0,78,4939	0/0:34,0:34:48.64:0,49,2601	0/1:22,11:34:99:965,0,160	1/1:13,6:20:9.03:375,9,0	1/1:12,8:19:16.64:774,17,0
chr10	108661224	.	TAG	T	1093.34	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.080;DP=755;FS=1.277;HRun=0;HaplotypeScore=133.9326;InbreedingCoeff=0.9333;MQ=55.13;MQ0=10;MQRankSum=2.583;QD=7.44;ReadPosRankSum=1.792;VQSLOD=3.2202;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,34:46:14.95:165,15,0	0/0:8,0:8:17.94:0,18,281	0/0:21,0:13:4.11:0,4,493	0/0:16,0:10:22.11:0,22,380	0/0:16,0:15:27.08:0,27,414	0/0:23,0:23:41.05:0,41,617	0/0:30,0:30:77.63:0,78,1211	0/0:34,0:33:75.18:0,75,1130	1/1:14,19:33:21.05:258,21,0	0/0:28,0:28:63.08:0,63,951	0/0:19,0:19:30.24:0,30,463	0/0:32,0:32:70.48:0,70,1122	0/0:26,1:27:14.06:0,14,705	0/0:33,0:33:54.54:0,55,918	0/0:30,0:31:43.69:0,44,690	0/0:30,0:30:62.94:0,63,1025	1/1:16,23:38:11.70:144,12,0	1/1:25,4:27:59.94:681,60,0	0/0:14,0:14:30.10:0,30,485	0/0:32,0:32:73.04:0,73,1056	0/0:36,1:36:35.10:0,35,1077	0/0:23,0:23:50.93:0,51,821	0/0:18,0:17:20.75:0,21,301	0/0:44,0:43:80.94:0,81,1262	0/0:32,0:32:59.56:0,60,954	0/0:34,0:33:71.60:0,72,1086	0/0:9,0:9:18.06:0,18,253	0/0:16,0:15:31.91:0,32,409
chr10	108661732	.	ATG	A	6178.48	PASS	AB=0.919;AC=26;AF=0.464;AN=56;BaseQRankSum=16.357;DP=1154;FS=12.201;HRun=0;HaplotypeScore=166.8359;InbreedingCoeff=0.7059;MQ=59.49;MQ0=9;MQRankSum=-0.734;QD=11.68;ReadPosRankSum=0.607;VQSLOD=3.6842;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:65:99:506,102,0	0/1:15,1:16:2.08:2,0,416	0/0:40,0:22:6.02:0,6,93	0/0:48,0:22:15.04:0,15,189	0/0:29,0:29:34.78:0,35,856	0/1:25,3:28:57.95:58,0,617	0/0:54,0:56:15.53:0,16,1246	1/1:22,16:38:44.82:483,45,0	1/1:15,0:49:68.05:335,68,0	0/0:63,0:63:78.93:0,79,1636	0/1:23,3:26:7.32:7,0,805	0/0:59,2:62:58.96:0,59,1691	0/0:56,3:59:15.74:0,16,1684	0/0:51,1:54:94.22:0,94,1873	0/0:54,2:55:75.86:0,76,1599	0/0:44,2:47:52.97:0,53,1363	1/1:8,0:34:59.66:293,60,0	1/1:8,0:16:21.92:119,22,0	1/1:12,14:27:46.11:477,46,0	1/1:6,20:27:53.65:576,54,0	1/1:45,38:88:99:1761,164,0	0/1:41,2:44:26.28:26,0,1098	0/0:22,0:22:45.14:0,45,681	0/0:50,2:52:44.05:0,44,1602	0/0:36,1:37:46.07:0,46,1104	1/1:12,28:40:40.05:936,40,0	1/1:6,19:25:48.14:563,48,0	1/1:2,4:6:3.01:35,3,0
chr10	108664247	.	T	TA	4490.61	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-13.735;DP=674;FS=10.938;HRun=6;HaplotypeScore=61.9549;InbreedingCoeff=0.9913;MQ=85.33;MQ0=0;MQRankSum=-2.504;QD=34.54;ReadPosRankSum=2.406;VQSLOD=3.9598;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,55:57:99:2037,163,0	1/1:1,10:11:30.10:377,30,0	0/0:26,0:26:66.13:0,66,663	0/0:16,0:16:42.05:0,42,409	0/0:19,0:19:51.10:0,51,513	0/0:24,0:24:66.15:0,66,673	0/0:25,0:25:69.15:0,69,704	0/0:27,0:27:72.15:0,72,729	0/0:25,0:25:69.16:0,69,704	0/0:25,0:25:69.13:0,69,704	0/0:15,0:15:45.10:0,45,459	0/0:18,0:18:54.12:0,54,551	0/0:22,0:22:60.12:0,60,605	0/0:22,0:22:57.13:0,57,582	0/0:29,0:29:84.17:0,84,850	0/0:24,0:24:69.16:0,69,704	1/1:2,30:32:87.28:1095,87,0	1/1:3,27:30:78.25:981,78,0	0/0:18,0:18:45.03:0,45,431	0/0:20,0:20:48.09:0,48,483	0/0:30,0:30:84.19:0,84,857	0/0:22,0:22:57.11:0,57,575	0/0:22,0:22:60.13:0,60,612	0/0:39,0:39:99:0,102,1032	0/0:17,0:17:45.09:0,45,453	0/0:28,0:28:75.17:0,75,765	0/0:27,0:26:78.16:0,78,788	0/0:4,0:4:12.03:0,12,122
chr10	108665632	.	A	AT	251.86	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.797;DP=691;FS=5.735;HRun=8;HaplotypeScore=86.8466;InbreedingCoeff=0.9067;MQ=75.95;MQ0=0;MQRankSum=0.164;QD=22.90;ReadPosRankSum=-0.476;VQSLOD=3.9025;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,1039	1/1:1,10:11:30.09:346,30,0	0/0:16,0:16:22.86:0,23,216	0/0:14,0:14:6.40:0,6,116	0/0:23,0:23:65.96:0,66,593	0/0:26,0:26:66.02:0,66,604	0/0:30,0:31:83.07:0,83,747	0/0:32,0:32:71.98:0,72,649	0/0:21,0:21:57.01:0,57,517	0/0:31,0:31:81.02:0,81,738	0/0:21,0:21:57.02:0,57,522	0/0:20,0:20:48.01:0,48,439	0/0:24,0:24:69.02:0,69,627	0/0:19,0:19:57.01:0,57,515	0/0:31,0:31:87.04:0,87,796	0/0:24,0:24:66.03:0,66,604	0/0:33,0:33:93.03:0,93,845	0/0:29,0:29:77.99:0,78,700	0/0:20,0:20:44.98:0,45,402	0/0:30,0:30:74.83:0,75,659	0/0:25,0:25:69.03:0,69,631	0/0:24,0:24:59.95:0,60,549	0/0:26,0:26:66:0,66,594	0/0:29,0:29:87.05:0,87,796	0/0:16,0:16:47.98:0,48,427	0/0:32,0:32:87.02:0,87,791	0/0:33,0:33:90.03:0,90,819	0/0:9,0:9:24.01:0,24,220
chr10	108668530	.	TGAGCATCACAGGCGCTGG	T	1651.40	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.872;DP=437;FS=0.000;HRun=0;HaplotypeScore=213.6796;InbreedingCoeff=0.8610;MQ=80.62;MQ0=0;MQRankSum=-5.892;QD=47.18;ReadPosRankSum=1.244;VQSLOD=2.8670;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,10:19:27.09:1374,27,0	0/0:3,0:3:9:0,9,497	0/0:14,0:14:39.13:0,39,2247	0/0:9,0:9:27.09:0,27,1284	0/0:12,0:12:36.11:0,36,2654	0/0:12,0:12:33.11:0,33,2836	0/0:26,0:26:78.25:0,78,6136	0/0:33,0:33:99:0,99,6576	0/0:19,0:19:57.20:0,57,4494	0/0:17,0:17:48.16:0,48,3740	0/0:7,0:7:21.07:0,21,1578	0/0:20,0:20:54.18:0,54,4429	0/0:15,0:15:45.15:0,45,3485	0/0:14,0:14:42.14:0,42,3333	0/0:16,0:16:48.16:0,48,3289	0/0:17,0:17:51.16:0,51,3730	1/1:3,5:8:3.01:85,3,0	1/1:4,4:8:6.02:315,6,0	0/0:6,0:6:18.06:0,18,1048	0/0:15,0:15:42.14:0,42,2882	0/0:43,0:43:99:0,129,9335	0/0:18,0:18:48.16:0,48,3666	0/0:11,0:11:33.11:0,33,2651	0/0:27,0:27:75.17:0,75,5618	0/0:15,0:15:45.15:0,45,3617	0/0:15,0:15:45.15:0,45,3237	0/0:13,0:13:39.13:0,39,2643	0/0:5,0:5:15.05:0,15,1062
chr10	108668724	.	T	TGG	4975.89	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.690;DP=635;FS=2.122;HRun=0;HaplotypeScore=93.6410;InbreedingCoeff=0.9994;MQ=82.58;MQ0=0;MQRankSum=-3.184;QD=51.30;ReadPosRankSum=3.060;VQSLOD=5.9196;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:78.22:1543,78,0	0/0:15,0:15:45.14:0,45,709	0/0:16,0:16:45.02:0,45,684	0/0:21,0:21:60.18:0,60,924	0/0:21,0:21:60.20:0,60,976	0/0:17,0:17:51.16:0,51,796	0/0:26,0:26:75.26:0,75,1214	0/0:31,0:31:87.29:0,87,1398	0/0:22,0:22:66.23:0,66,1070	0/0:25,0:25:75.26:0,75,1213	0/0:16,0:16:48.14:0,48,735	0/0:25,0:25:72.25:0,72,1175	0/0:21,0:21:63.18:0,63,975	0/0:33,0:33:99:0,99,1614	0/0:28,0:28:84.27:0,84,1346	0/0:23,0:23:69.24:0,69,1126	1/1:1,29:30:78.27:1585,78,0	1/1:0,33:35:93.28:1849,93,0	0/0:17,0:17:51.15:0,51,806	0/0:19,0:19:57.18:0,57,905	0/0:48,0:48:99:0,135,2166	0/0:16,0:16:45.15:0,45,731	0/0:15,0:15:42.14:0,42,675	0/0:37,0:37:99:0,108,1703	0/0:14,0:14:42.13:0,42,661	0/0:9,0:9:27.09:0,27,441	0/0:13,0:13:39.12:0,39,611	0/0:10,0:10:30.10:0,30,489
chr10	108669856	.	AGGCAGGAAGTC	A	4212.65	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.454;DP=708;FS=0.585;HRun=0;HaplotypeScore=216.9545;InbreedingCoeff=0.9984;MQ=79.19;MQ0=0;MQRankSum=-10.913;QD=58.51;ReadPosRankSum=0.630;VQSLOD=4.2739;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:48.12:1563,48,0	0/0:15,0:15:45.15:0,45,2505	0/0:18,0:18:54.18:0,54,2805	0/0:19,0:19:54.19:0,54,2533	0/0:20,0:20:57.19:0,57,2891	0/0:13,0:13:39.12:0,39,1836	0/0:33,0:33:99:0,99,5316	0/0:35,0:35:99:0,105,4950	0/0:36,0:36:99:0,108,5790	0/0:16,0:16:48.16:0,48,2142	0/0:12,0:12:36.10:0,36,1628	0/0:49,0:49:99:0,147,7372	0/0:41,0:41:99:0,117,5996	0/0:31,0:31:93.32:0,93,5422	0/0:39,0:39:99:0,117,6404	0/0:23,0:23:69.24:0,69,3567	1/1:0,20:20:39.05:1196,39,0	1/1:0,18:18:39.13:1453,39,0	0/0:23,0:23:69.24:0,69,3902	0/0:13,0:13:39.13:0,39,2079	0/0:55,0:55:99:0,163,8487	0/0:28,0:28:84.29:0,84,4734	0/0:16,0:16:48.16:0,48,2242	0/0:33,0:33:99:0,99,5286	0/0:14,0:14:42.14:0,42,2308	0/0:30,0:30:86.36:0,86,4650	0/0:17,0:17:51.16:0,51,2701	0/0:7,0:7:21.07:0,21,1141
chr10	108674041	.	GC	G	5257.52	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=-1.732;DP=235;FS=0.000;HRun=5;HaplotypeScore=92.8675;InbreedingCoeff=0.3304;MQ=37.86;MQ0=0;MQRankSum=-1.732;QD=22.86;ReadPosRankSum=0.417;VQSLOD=3.4238;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:24.07:272,24,0	1/1:1,2:3:3.01:34,3,0	./.	0/0:1,0:2:2.62:0,3,12	1/1:0,5:5:2.97:34,3,0	1/1:2,11:13:24.07:272,24,0	1/1:1,18:19:54.15:611,54,0	1/1:0,6:6:18.05:204,18,0	1/1:2,12:14:36.06:394,36,0	1/1:0,10:10:30.09:340,30,0	0/0:0,3:3:0:0,0,0	1/1:0,16:16:42.08:462,42,0	1/1:0,7:7:21.06:238,21,0	1/1:3,13:16:36.10:408,36,0	1/1:1,8:9:21.06:238,21,0	1/1:0,7:7:18.05:204,18,0	1/1:1,7:8:18.05:204,18,0	1/1:1,6:7:18.05:204,18,0	1/1:0,4:4:12.01:125,12,0	1/1:1,3:3:2.96:20,3,0	1/1:3,14:17:11.81:136,12,0	1/1:2,7:9:3.47:35,3,0	1/1:0,3:3:3.01:34,3,0	1/1:1,10:11:6.14:57,6,0	1/1:0,9:9:18.03:204,18,0	1/1:1,11:12:30.04:326,30,0	1/1:3,2:5:6.01:68,6,0	1/1:0,4:4:12.03:136,12,0
chr10	108674060	.	T	TG	10245.90	PASS	AC=54;AF=0.964;AN=56;BaseQRankSum=-1.718;DP=316;FS=0.000;HRun=2;HaplotypeScore=99.9399;InbreedingCoeff=0.4378;MQ=50.25;MQ0=0;MQRankSum=-1.732;QD=32.73;ReadPosRankSum=0.426;VQSLOD=4.4781;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:36.03:471,36,0	1/1:1,2:3:6.02:86,6,0	1/1:1,1:2:3.01:43,3,0	0/0:3,0:3:3:0,3,29	1/1:1,8:9:5.91:86,6,0	1/1:0,14:14:42.10:580,42,0	1/1:3,22:25:66.22:949,66,0	1/1:0,6:6:18.06:259,18,0	1/1:1,12:13:36.12:517,36,0	1/1:2,10:12:33.11:473,33,0	1/1:0,6:6:5.86:86,6,0	1/1:0,17:17:51.17:729,51,0	1/1:0,10:10:27.05:360,27,0	1/1:2,18:20:48.16:689,48,0	1/1:1,10:11:27:341,27,0	1/1:0,8:8:24.08:345,24,0	1/1:2,8:10:23.95:345,24,0	1/1:4,8:12:30.07:409,30,0	1/1:2,5:7:21.05:276,21,0	1/1:0,8:7:15.03:215,15,0	1/1:1,32:33:57.66:821,58,0	1/1:2,7:9:15.05:215,15,0	1/1:0,4:4:9.03:129,9,0	1/1:3,13:16:27.09:389,27,0	1/1:1,12:13:30.10:431,30,0	1/1:2,12:14:33.09:441,33,0	1/1:0,5:5:15.05:216,15,0	1/1:1,8:9:24.08:345,24,0
chr10	108674218	.	GC	G	4861.42	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=9.313;DP=572;FS=5.406;HRun=7;HaplotypeScore=66.2750;InbreedingCoeff=0.9967;MQ=73.28;MQ0=0;MQRankSum=-0.039;QD=25.72;ReadPosRankSum=-0.003;VQSLOD=5.3974;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:84.24:0,84,1040	1/1:0,11:11:27.06:275,27,0	0/0:13,0:13:39.11:0,39,463	0/0:11,0:11:24.54:0,25,281	0/0:7,0:7:18.01:0,18,208	0/0:27,0:27:72.21:0,72,876	0/0:37,0:37:99:0,105,1286	1/1:0,13:13:39.09:398,39,0	1/1:1,17:18:48.11:489,48,0	0/0:16,0:16:36.11:0,36,440	0/0:14,0:14:39.12:0,39,490	0/0:28,0:28:69.22:0,69,867	0/0:14,0:14:36.11:0,36,440	0/0:28,0:28:78.22:0,78,965	0/0:14,0:14:39.12:0,39,490	0/0:24,0:23:66.15:0,66,788	0/0:27,0:27:75.23:0,75,931	0/0:23,0:23:63.20:0,63,792	1/1:3,15:18:45.10:459,45,0	1/1:0,12:12:30.06:306,30,0	1/1:5,65:70:99:1775,174,0	0/0:13,0:13:30.09:0,30,370	0/0:14,0:14:39.12:0,39,484	0/0:20,0:20:60.17:0,60,729	0/0:19,0:19:45.01:0,45,543	1/1:2,21:23:57.12:578,57,0	1/1:3,14:17:39.09:398,39,0	1/1:1,6:7:18.04:184,18,0
chr10	108674379	.	T	TA	5597.12	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.670;DP=637;FS=2.044;HRun=2;HaplotypeScore=75.5101;InbreedingCoeff=0.9966;MQ=87.08;MQ0=0;MQRankSum=-1.440;QD=36.34;ReadPosRankSum=-2.449;VQSLOD=4.4550;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,1509	0/0:5,0:5:15.05:0,15,179	0/0:25,0:25:69.20:0,69,835	0/0:19,0:19:54.16:0,54,658	0/0:22,0:22:57.18:0,57,705	0/0:22,0:22:66.21:0,66,818	0/0:25,0:25:69.22:0,69,855	1/1:1,25:26:75.25:1051,75,0	0/0:23,0:23:69.22:0,69,854	0/0:27,0:27:78.24:0,78,964	0/0:13,0:13:36.09:0,36,432	0/0:28,0:28:81.25:0,81,1003	0/0:18,0:18:45.14:0,45,558	0/0:30,0:30:81.25:0,81,1003	0/0:17,0:17:45.14:0,45,558	0/0:24,0:24:72.23:0,72,892	0/0:36,0:36:99:0,108,1324	0/0:24,0:24:72.21:0,72,879	1/1:2,15:17:45.14:612,45,0	1/1:0,14:14:39.13:539,39,0	1/1:3,33:35:84.25:1141,84,0	0/0:15,0:15:42.13:0,42,520	0/0:12,0:12:33.10:0,33,409	0/0:28,0:28:84.26:0,84,1041	0/0:27,0:27:72.20:0,72,877	1/1:1,23:24:66.19:904,66,0	1/1:0,25:25:72.24:1013,72,0	1/1:0,12:12:24.08:337,24,0
chr10	108674753	.	TGG	T	1862.64	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=2.314;DP=497;FS=16.784;HRun=10;HaplotypeScore=69.9642;InbreedingCoeff=0.8065;MQ=74.51;MQ0=1;MQRankSum=-1.448;QD=20.25;ReadPosRankSum=6.051;VQSLOD=0.7543;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,34:41:85.47:1054,85,0	0/0:8,0:8:6.02:0,6,94	0/0:19,0:20:39.02:0,39,505	0/1:12,0:12:6.59:7,0,93	0/0:17,0:18:42.09:0,42,604	0/0:24,0:24:42.13:0,42,626	0/0:23,0:24:53.66:0,54,788	0/0:12,0:17:18.89:0,19,207	0/0:16,0:16:41.99:0,42,426	0/0:14,0:15:29.59:0,30,436	0/0:16,0:16:30.08:0,30,433	0/0:18,0:18:36.10:0,36,527	0/0:14,0:14:30.06:0,30,408	0/0:14,0:15:36.11:0,36,546	0/0:14,0:14:30.10:0,30,475	0/0:21,0:22:65.18:0,65,946	1/1:0,22:21:48.09:521,48,0	1/1:2,13:16:33.03:426,33,0	0/0:6,0:10:18.05:0,18,231	0/0:13,0:19:21.01:0,21,200	0/0:9,0:15:15.01:0,15,156	0/0:18,0:18:42.10:0,42,611	0/0:11,0:12:29.57:0,30,395	0/0:27,0:27:66.22:0,66,1042	0/0:21,0:21:39.12:0,39,578	0/0:10,0:16:27.04:0,27,291	0/0:4,0:12:11.83:0,12,128	0/0:3,0:13:12.02:0,12,114
chr10	108730872	.	ACACG	A	16536.56	PASS	AC=42;AF=0.778;AN=54;BaseQRankSum=6.239;DP=715;FS=0.438;HRun=0;HaplotypeScore=125.8287;InbreedingCoeff=0.9933;MQ=64.20;MQ0=5;MQRankSum=-1.535;QD=29.48;ReadPosRankSum=5.929;VQSLOD=4.7351;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,36:52:69.24:1170,69,0	0/0:21,0:21:42.14:0,42,1029	0/0:32,0:23:35.95:0,36,731	0/0:32,0:23:41.85:0,42,825	1/1:1,12:13:24.08:373,24,0	1/1:6,16:22:33.11:560,33,0	1/1:8,15:23:33.11:533,33,0	1/1:10,18:28:54.12:824,54,0	1/1:8,24:32:48.16:802,48,0	0/0:32,0:32:81.28:0,81,1983	0/0:14,0:14:30.09:0,30,645	1/1:9,21:30:57.19:967,57,0	1/1:4,24:28:63.22:1054,63,0	1/1:4,14:18:42.14:699,42,0	1/1:6,20:26:48.16:788,48,0	0/0:17,0:17:39.13:0,39,913	1/1:14,18:32:36.12:597,36,0	1/1:7,12:19:33.11:560,33,0	1/1:10,14:24:38.91:584,39,0	1/1:3,16:19:48.16:790,48,0	1/1:6,25:31:54.11:901,54,0	1/1:5,14:19:39.13:661,39,0	1/1:2,23:25:44.64:749,45,0	1/1:8,24:32:54.18:916,54,0	1/1:3,24:27:57.20:967,57,0	1/1:7,28:35:12.36:1292,12,0	1/1:8,18:26:45.15:750,45,0	./.
chr10	108731389	.	C	CCCCA	702.12	PASS	AB=0.944;AC=22;AF=0.423;AN=52;BaseQRankSum=1.378;DP=294;FS=57.729;HRun=0;HaplotypeScore=81.5505;InbreedingCoeff=-0.1840;MQ=47.26;MQ0=6;MQRankSum=-7.216;QD=3.73;ReadPosRankSum=-0.507;VQSLOD=-0.6201;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:13.61:14,0,38	0/0:1,0:1:2.98:0,3,22	./.	0/0:14,0:8:21.91:0,22,253	0/0:15,0:16:10.75:0,11,88	0/0:15,0:15:0.88:0,1,34	0/1:12,0:12:8.36:8,0,161	0/1:15,0:15:99:138,0,103	1/1:14,1:14:3.45:14,3,0	0/1:10,0:9:6.17:6,0,175	0/0:10,0:9:8.94:0,9,102	0/1:13,0:14:33.21:33,0,70	1/1:5,4:9:1.78:12,2,0	0/1:8,0:8:1.38:1,0,19	0/1:15,0:15:8.80:9,0,23	0/1:3,0:3:0:0,0,0	0/0:10,0:10:15.09:0,15,139	1/1:2,0:2:0.47:1,0,0	0/1:10,1:11:99:202,0,122	0/0:11,0:11:6.31:0,6,130	1/1:5,0:3:2.50:9,2,0	0/1:13,0:13:16.10:19,0,16	0/1:9,0:9:3.28:3,0,105	./.	0/0:13,0:13:9.07:0,9,176	0/1:12,4:16:99:180,0,116	0/1:8,0:10:8.86:177,0,9	0/1:5,0:5:12.07:12,0,57
chr10	108731774	.	G	GA	7731.99	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-5.939;DP=487;FS=2.539;HRun=9;HaplotypeScore=55.5328;InbreedingCoeff=0.8958;MQ=74.74;MQ0=8;MQRankSum=0.935;QD=19.77;ReadPosRankSum=-0.093;VQSLOD=5.2501;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,21:30:51.14:564,51,0	0/0:8,0:8:20.93:0,21,170	0/0:39,1:20:10.16:0,10,91	0/1:29,0:15:3.02:3,0,25	1/1:3,15:18:36.10:397,36,0	1/1:1,14:15:39.06:418,39,0	1/1:0,8:8:18.05:199,18,0	1/1:9,12:21:12.95:327,13,0	1/1:3,9:12:26.99:271,27,0	0/0:25,0:24:59.93:0,60,511	0/0:10,0:10:23.90:0,24,199	1/1:2,10:12:21.06:232,21,0	1/1:3,7:9:15.04:166,15,0	1/1:1,9:10:21.06:232,21,0	1/1:2,7:10:17.94:182,18,0	0/0:12,0:12:32.95:0,33,275	1/1:3,23:25:69.19:762,69,0	1/1:2,16:18:36.10:398,36,0	1/1:5,14:19:45.09:474,45,0	1/1:2,22:24:33.62:548,34,0	1/1:4,6:10:18.52:200,19,0	1/1:1,15:16:33.02:349,33,0	1/1:4,21:25:48.06:502,48,0	1/1:5,10:16:24.06:265,24,0	1/1:1,14:15:27.07:298,27,0	1/1:2,15:17:44.45:453,44,0	1/1:9,4:13:15.04:162,15,0	1/1:6,11:17:30.08:328,30,0
chr10	108732069	.	TGA	T	2377.15	PASS	AB=0.921;AC=43;AF=0.768;AN=56;BaseQRankSum=7.004;DP=669;FS=17.557;HRun=0;HaplotypeScore=97.5031;InbreedingCoeff=0.3801;MQ=70.78;MQ0=16;MQRankSum=0.656;QD=4.28;ReadPosRankSum=0.754;VQSLOD=1.0939;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,26:40:2.63:45,0,3	0/0:8,0:8:12.53:0,13,81	0/0:42,0:22:10.88:0,11,110	0/0:44,0:26:5.57:0,6,68	0/1:17,0:17:0:0,0,0	1/1:8,0:21:2.84:14,3,0	1/1:29,0:29:2.94:18,3,0	1/1:7,0:24:46.81:336,47,0	1/1:10,0:10:11.93:90,12,0	0/0:20,0:19:2.25:0,2,330	0/1:17,0:17:3.43:3,0,264	1/1:10,1:20:0.61:98,1,0	0/1:12,0:12:2.33:78,0,2	1/1:8,19:27:4:101,4,0	1/1:6,17:23:6.02:72,6,0	0/1:16,0:16:17.33:17,0,225	1/1:9,2:31:14.70:124,15,0	1/1:5,18:22:6.02:72,6,0	1/1:11,6:17:17.95:159,18,0	1/1:8,0:18:2.58:15,3,0	1/1:25,0:62:8.64:47,9,0	1/1:13,0:13:27.34:205,27,0	1/1:9,10:18:5.54:53,6,0	1/1:6,33:39:14.89:180,15,0	1/1:9,1:22:11.85:110,12,0	1/1:26,0:26:28.70:389,29,0	1/1:13,0:14:23.73:171,24,0	1/1:8,0:7:17.87:129,18,0
chr10	108732085	.	AGAGAGT	A	2410.19	PASS	AB=0.940;AC=20;AF=0.357;AN=56;BaseQRankSum=-1.618;DP=706;FS=18.169;HRun=0;HaplotypeScore=125.0607;InbreedingCoeff=0.1221;MQ=58.76;MQ0=24;MQRankSum=1.861;QD=6.85;ReadPosRankSum=3.958;VQSLOD=1.3189;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:46,0:45:31.96:32,0,221	0/0:8,0:8:17.40:0,17,200	0/0:30,0:10:9.48:0,9,215	0/0:29,0:12:17.65:0,18,222	0/1:2,16:18:0.03:0,0,0	1/1:15,1:16:1.81:5,2,0	1/1:3,31:33:2.16:31,2,0	1/1:31,0:29:3.79:692,4,0	1/1:11,0:10:18.03:238,18,0	0/0:22,0:21:52.96:0,53,951	0/0:20,0:20:46.02:0,46,851	0/1:22,1:24:68.07:68,0,289	0/1:16,1:16:99:116,0,139	0/0:29,0:29:20.11:0,20,194	0/0:26,0:26:19.14:0,19,148	0/0:21,0:21:45.11:0,45,798	0/0:33,0:32:19.47:0,19,228	0/0:26,0:25:11.35:0,11,170	0/1:22,0:21:99:167,0,151	0/0:22,0:21:20.31:0,20,165	0/0:68,0:65:40.28:0,40,487	1/1:14,0:13:5.49:257,5,0	0/1:17,0:16:43.39:43,0,59	0/1:45,0:44:75.56:76,0,158	0/0:20,0:18:7.52:0,8,51	0/1:25,0:25:99:419,0,154	0/1:19,0:19:83.56:234,0,84	0/1:13,0:11:66.95:197,0,67
chr10	108733833	.	TC	T	4944.17	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=8.200;DP=391;FS=6.321;HRun=1;HaplotypeScore=86.5047;InbreedingCoeff=0.9507;MQ=57.25;MQ0=5;MQRankSum=-0.009;QD=15.17;ReadPosRankSum=-1.422;VQSLOD=3.9417;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:58.78:369,59,0	0/0:8,0:8:24.07:0,24,304	0/0:4,0:2:6.02:0,6,71	0/0:8,0:7:17.42:0,17,162	1/1:15,1:16:37.45:240,37,0	1/1:14,1:15:32.01:207,32,0	1/1:11,0:11:21.92:151,22,0	1/1:29,0:27:63.39:505,63,0	1/1:14,0:14:30.58:194,31,0	0/0:26,0:26:75.20:0,75,925	0/0:13,0:13:36.08:0,36,448	1/1:8,0:8:9.60:65,10,0	1/1:7,1:8:23.73:212,24,0	1/1:14,0:14:26.62:153,27,0	1/1:9,0:9:22.28:119,22,0	0/0:6,0:6:18.06:0,18,239	1/1:23,0:23:53.35:318,53,0	1/1:25,1:26:62.07:314,62,0	1/1:17,2:17:37.94:271,38,0	1/1:10,0:10:29:175,29,0	1/1:6,0:6:14.88:121,15,0	1/1:4,0:4:11.68:68,12,0	1/1:7,0:7:20.27:145,20,0	1/1:10,0:10:28.59:182,29,0	1/1:16,1:17:47.78:321,48,0	1/1:18,0:18:47.58:281,48,0	1/1:22,1:22:44.08:337,44,0	1/1:14,0:13:31.40:199,31,0
chr10	108733843	.	T	TA	2769.97	PASS	AB=1.000;AC=43;AF=0.796;AN=54;BaseQRankSum=8.642;DP=375;FS=11.570;HRun=2;HaplotypeScore=88.2301;InbreedingCoeff=0.7625;MQ=55.54;MQ0=7;MQRankSum=2.668;QD=8.60;ReadPosRankSum=0.150;VQSLOD=-0.0478;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:43.83:185,44,0	0/0:7,0:7:21.07:0,21,258	./.	0/1:7,0:6:1.68:2,0,122	1/1:16,0:16:32.90:183,33,0	1/1:15,0:15:6.29:76,6,0	1/1:13,0:13:20.49:120,20,0	1/1:22,2:19:36.14:214,36,0	1/1:14,0:14:24.53:130,25,0	0/0:22,0:22:66.18:0,66,790	0/0:12,0:12:33.02:0,33,386	1/1:9,0:9:14.74:79,15,0	1/1:7,0:7:17.36:113,17,0	1/1:16,0:16:24.60:161,25,0	1/1:7,1:8:18.81:106,19,0	0/0:6,0:6:18.06:0,18,221	1/1:21,0:21:36.53:180,37,0	1/1:29,0:29:54.30:255,54,0	1/1:23,0:20:18.97:180,19,0	1/1:9,0:9:22.13:122,22,0	0/1:2,0:2:1.52:7,0,2	1/1:4,1:5:14.53:108,15,0	1/1:6,0:6:10.51:43,11,0	1/1:10,0:10:23.94:107,24,0	1/1:13,0:13:30.17:157,30,0	1/1:16,0:16:22.80:188,23,0	0/1:21,0:20:0.31:91,0,0	1/1:16,0:15:26.77:129,27,0
chr10	108735551	.	ATG	A	2938.15	PASS	AB=0.951;AC=32;AF=0.571;AN=56;BaseQRankSum=4.603;DP=563;FS=20.972;HRun=0;HaplotypeScore=205.1088;InbreedingCoeff=0.0496;MQ=68.73;MQ0=2;MQRankSum=5.791;QD=6.53;ReadPosRankSum=2.255;VQSLOD=1.4098;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:41,2:43:8.09:152,0,8	0/0:6,0:6:17.92:0,18,186	0/0:34,0:20:41.04:0,41,478	0/0:42,1:30:47.01:0,47,349	1/1:10,2:12:19.27:151,19,0	0/1:16,1:17:3.68:54,0,4	1/1:24,1:24:1.60:263,2,0	1/1:9,0:9:5.93:43,6,0	0/1:24,3:26:13.59:173,0,14	0/1:22,0:22:10.85:11,0,314	0/0:12,0:12:24.10:0,24,239	0/1:9,1:10:26.10:34,0,26	1/1:16,2:17:4.83:258,5,0	1/1:13,1:14:15.73:125,16,0	0/1:21,2:23:18.14:238,0,18	0/0:16,0:16:47.83:0,48,464	0/1:35,0:35:1.62:235,0,2	0/1:16,0:16:0.87:41,0,1	1/1:2,1:3:6.28:60,6,0	0/1:19,1:20:3.49:160,0,3	1/1:30,1:30:26.90:178,27,0	1/1:16,1:17:13.81:293,14,0	0/1:11,0:12:3.12:88,0,3	0/1:27,2:29:35.21:89,0,35	0/1:12,3:14:8.20:80,0,8	0/1:24,1:25:1.71:251,0,2	1/1:19,1:20:0.95:107,1,0	0/1:7,0:7:9.06:23,0,9
chr10	108735681	.	GA	G	6712.35	PASS	AB=0.531;AC=43;AF=0.768;AN=56;BaseQRankSum=-0.121;DP=431;FS=1.675;HRun=2;HaplotypeScore=96.4544;InbreedingCoeff=0.8269;MQ=71.70;MQ0=26;MQRankSum=-0.635;QD=22.30;ReadPosRankSum=0.822;VQSLOD=4.8384;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:18:44.96:507,45,0	0/0:5,0:5:15.05:0,15,222	0/0:31,0:20:38.44:0,38,481	0/0:58,0:31:56.45:0,56,595	1/1:1,10:11:17.95:194,18,0	1/1:1,10:10:27.09:350,27,0	1/1:1,16:14:29.96:355,30,0	1/1:3,11:14:33.58:428,34,0	1/1:5,17:19:47.63:507,48,0	0/0:12,0:12:35.64:0,36,453	0/0:14,0:13:36.09:0,36,499	1/1:0,16:16:41.56:450,42,0	1/1:1,8:8:15.05:193,15,0	1/1:2,14:15:36.05:442,36,0	1/1:2,14:14:32.93:380,33,0	0/0:10,0:10:30.09:0,30,429	1/1:3,7:10:8.04:184,8,0	1/1:3,11:10:21.07:272,21,0	1/1:3,6:9:23.22:258,23,0	1/1:0,8:8:14.89:154,15,0	1/1:2,15:15:0.46:245,0,0	1/1:2,12:13:21.07:268,21,0	1/1:1,13:12:19.39:188,19,0	1/1:3,13:14:20.50:215,21,0	1/1:2,9:10:21.06:258,21,0	0/1:2,15:16:47.77:394,0,48	1/1:2,6:8:21.03:242,21,0	1/1:3,7:8:18.06:228,18,0
chr10	108736213	.	C	CT	21014.74	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=7.044;DP=620;FS=2.264;HRun=1;HaplotypeScore=88.5577;InbreedingCoeff=0.9991;MQ=95.39;MQ0=0;MQRankSum=-8.353;QD=41.29;ReadPosRankSum=5.358;VQSLOD=4.9935;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:93.32:1394,93,0	0/0:8,0:8:24.08:0,24,304	0/0:29,0:29:80.25:0,80,978	0/0:29,0:29:82.93:0,83,1056	1/1:0,17:17:51.17:763,51,0	1/1:0,19:19:54.18:809,54,0	1/1:0,25:25:69.23:1034,69,0	1/1:3,29:32:90.30:1333,90,0	1/1:2,25:27:72.24:1079,72,0	0/0:15,0:15:42.14:0,42,545	0/0:8,0:8:24.08:0,24,312	1/1:0,26:26:72.24:1079,72,0	1/1:0,13:13:39.13:585,39,0	1/1:0,24:24:69.19:1009,69,0	1/1:0,26:26:69.23:1034,69,0	0/0:22,0:22:66.20:0,66,843	1/1:0,28:28:78.26:1169,78,0	1/1:0,24:23:66.22:989,66,0	1/1:1,17:18:48.16:717,48,0	1/1:0,19:19:57.15:828,57,0	1/1:3,49:52:99:2112,141,0	1/1:0,15:15:39.13:584,39,0	1/1:0,12:12:36.12:539,36,0	1/1:1,21:22:57.19:854,57,0	1/1:0,17:16:45.15:674,45,0	1/1:0,24:24:72.24:1079,72,0	1/1:0,19:19:45.15:674,45,0	1/1:1,15:16:45.15:674,45,0
chr10	108737427	.	CCACA	C	286.38	PASS	AB=0.916;AC=11;AF=0.204;AN=54;BaseQRankSum=-0.622;DP=666;FS=9.439;HRun=0;HaplotypeScore=186.9999;InbreedingCoeff=0.1879;MQ=41.93;MQ0=31;MQRankSum=-3.053;QD=1.28;ReadPosRankSum=0.286;VQSLOD=2.1420;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:6.50:0,7,46	0/0:7,4:11:14.83:0,15,260	0/0:73,0:18:18.04:0,18,255	0/0:72,0:16:8.98:0,9,110	0/1:11,0:10:0:1,0,0	0/0:17,0:17:1.87:0,2,18	0/0:31,0:30:19.55:0,20,104	0/0:30,0:24:12.92:0,13,68	0/0:17,0:14:10.03:0,10,76	0/1:30,7:38:99:326,0,390	0/1:14,5:20:5.18:5,0,393	0/0:26,0:24:18.35:0,18,75	0/0:15,0:15:24:0,24,112	0/0:14,0:14:4.79:0,5,27	0/0:24,0:22:0.40:0,0,1	0/1:37,11:51:40.95:41,0,699	0/0:16,0:15:4.29:0,4,45	0/0:9,0:7:6.67:0,7,66	0/1:17,0:15:3.67:4,0,26	1/1:9,0:9:0.88:2,1,0	1/1:40,0:31:3.57:10,4,0	0/1:16,0:16:0.07:0,0,0	./.	0/1:20,0:17:0:0,0,0	0/0:13,0:13:4.80:0,5,20	0/0:18,0:18:12.33:0,12,122	0/0:12,0:11:6.68:0,7,57	0/0:1,0:1:2.90:0,3,16
chr10	108737439	.	A	ATT	628.03	PASS	AB=0.820;AC=12;AF=0.214;AN=56;BaseQRankSum=4.279;DP=643;FS=0.000;HRun=0;HaplotypeScore=189.4158;InbreedingCoeff=-0.0146;MQ=37.21;MQ0=44;MQRankSum=-5.215;QD=3.36;ReadPosRankSum=1.595;VQSLOD=2.8149;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,3:22:99:109,0,167	0/0:13,0:13:36.12:0,36,528	0/0:83,0:11:26.99:0,27,357	0/0:74,0:8:21.01:0,21,268	0/1:9,0:8:0:0,0,0	0/0:13,1:15:3.59:0,4,124	0/1:20,2:23:99:142,0,113	0/1:16,7:17:99:280,0,103	0/0:14,0:13:13.52:0,14,129	0/0:44,0:41:99:0,109,1453	0/0:27,0:26:40.92:0,41,618	0/0:25,0:25:34.80:0,35,171	0/0:12,0:12:1.74:0,2,58	0/0:17,0:17:11.08:0,11,80	0/0:26,0:24:3.50:0,4,95	0/0:48,0:48:99:0,110,1587	0/1:6,2:11:43.14:80,0,43	0/1:6,1:6:57.37:66,0,57	0/0:12,0:11:6.57:0,7,142	0/1:4,0:7:12.42:25,0,12	0/1:21,3:21:3.04:40,0,3	0/1:19,0:19:12.25:12,0,31	0/1:10,0:11:0.06:0,0,0	1/1:15,0:14:1.06:3,1,0	0/0:11,0:12:21.72:0,22,114	0/0:15,0:13:28.79:0,29,237	0/0:11,0:10:10.92:0,11,63	0/0:1,0:1:2.90:0,3,16
chr10	108737440	.	CA	C	2547.54	PASS	AB=0.696;AC=33;AF=0.589;AN=56;BaseQRankSum=8.628;DP=600;FS=4.544;HRun=1;HaplotypeScore=159.4566;InbreedingCoeff=0.2004;MQ=34.74;MQ0=44;MQRankSum=-6.457;QD=8.17;ReadPosRankSum=-0.253;VQSLOD=0.8074;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,6:16:29.45:276,29,0	0/0:13,0:13:39.13:0,39,530	0/0:81,0:10:27.08:0,27,371	0/0:75,0:8:21.01:0,21,258	0/1:2,5:6:0:0,0,0	1/1:6,8:14:1.78:238,2,0	1/1:9,11:19:39.12:332,39,0	0/1:13,5:12:67.82:150,0,68	0/1:7,6:11:13.52:129,0,14	0/0:46,0:43:92.71:0,93,1182	0/0:27,0:26:44.74:0,45,593	1/1:8,15:22:25.86:265,26,0	0/1:5,5:11:39.50:53,0,40	0/1:11,6:16:1.44:103,0,1	1/1:14,12:24:23.75:246,24,0	0/0:45,1:46:80.13:0,80,1405	1/1:9,2:10:21.33:180,21,0	0/1:7,3:6:25.36:115,0,25	0/1:8,3:9:91.35:92,0,91	1/1:3,3:6:3.01:40,3,0	1/1:24,6:20:7.08:29,7,0	1/1:7,7:14:5.68:79,6,0	0/1:4,5:9:0:0,0,0	1/1:7,8:12:3.34:32,3,0	0/1:5,6:12:29.33:148,0,29	0/1:10,4:12:67.66:145,0,68	0/1:1,9:9:30.01:52,0,30	1/1:0,1:1:2.96:19,3,0
chr10	108737441	.	A	AC	1356.72	PASS	AB=0.908;AC=33;AF=0.589;AN=56;BaseQRankSum=8.807;DP=615;FS=5.641;HRun=1;HaplotypeScore=175.6718;InbreedingCoeff=0.2585;MQ=34.32;MQ0=44;MQRankSum=-6.158;QD=4.15;ReadPosRankSum=-1.841;VQSLOD=-0.4681;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,4:16:22.73:160,23,0	0/0:13,0:13:39.13:0,39,498	0/0:81,0:10:27.08:0,27,328	0/0:76,0:8:18.02:0,18,211	0/1:8,0:7:0.03:0,0,0	0/1:12,1:14:2.43:78,0,2	1/1:15,2:19:28.57:191,29,0	0/1:12,7:14:67.65:251,0,68	0/1:14,1:12:7.93:54,0,8	0/0:45,0:42:99:0,110,1191	0/0:27,0:26:43.07:0,43,538	1/1:23,1:23:20.95:90,21,0	0/1:11,0:11:26.44:32,0,26	1/1:16,0:16:7.82:28,8,0	1/1:27,0:25:14.71:75,15,0	0/0:46,0:46:86.70:0,87,1365	1/1:7,3:12:18.50:197,18,0	0/1:7,1:6:22.31:93,0,22	0/1:10,0:10:80.35:80,0,90	1/1:6,0:6:2.20:34,2,0	1/1:29,3:22:7.99:36,8,0	1/1:15,0:16:4.93:45,5,0	0/1:9,0:10:0:0,0,0	1/1:15,0:14:3.48:33,3,0	0/1:12,0:13:7.51:8,0,33	0/1:12,0:10:37.10:37,0,75	0/1:10,0:9:2.08:2,0,45	1/1:1,0:1:1.82:5,2,0
chr10	108737443	.	A	ATGC	3110.32	PASS	AB=0.747;AC=33;AF=0.589;AN=56;BaseQRankSum=7.637;DP=656;FS=2.741;HRun=0;HaplotypeScore=198.2468;InbreedingCoeff=0.1808;MQ=35.10;MQ0=45;MQRankSum=-7.225;QD=8.52;ReadPosRankSum=-0.293;VQSLOD=3.4156;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,5:19:21.63:219,22,0	0/0:13,0:13:39.11:0,39,688	0/0:80,0:10:27.04:0,27,381	0/0:78,0:8:18.06:0,18,296	0/1:5,5:9:0.07:0,0,0	1/1:9,6:16:0.42:208,0,0	1/1:8,9:18:31.55:414,32,0	0/1:21,3:18:99:114,0,165	0/1:11,4:14:44.14:99,0,44	0/0:45,0:42:99:0,111,1762	0/0:29,0:28:44.25:0,44,816	1/1:13,14:26:16.08:421,16,0	0/1:7,3:13:5.18:176,0,5	1/1:14,4:19:4.02:173,4,0	0/1:17,9:26:2.22:147,0,2	0/0:45,1:46:75.35:0,75,1975	1/1:12,2:13:25.85:333,26,0	0/1:8,1:6:38.68:164,0,39	0/1:12,1:11:99:139,0,156	1/1:3,3:6:2.55:31,3,0	1/1:29,5:25:3.30:23,3,0	1/1:14,7:21:5.75:58,6,0	0/1:4,5:10:0.01:0,0,0	1/1:8,8:14:3.05:13,3,0	0/1:11,5:17:29.47:123,0,29	0/1:9,3:11:83.29:225,0,83	0/1:5,7:11:9.06:176,0,9	1/1:1,0:1:2.99:23,3,0
chr10	108737453	.	ACCATGC	A	4786.01	PASS	AB=0.667;AC=28;AF=0.500;AN=56;BaseQRankSum=6.015;DP=602;FS=17.933;HRun=0;HaplotypeScore=187.4731;InbreedingCoeff=0.2005;MQ=39.85;MQ0=42;MQRankSum=-7.663;QD=16.39;ReadPosRankSum=0.576;VQSLOD=2.8912;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,8:17:2.16:0,2,64	0/0:11,0:11:20.89:0,21,556	0/0:79,0:8:20.93:0,21,308	0/0:74,0:10:5.86:0,6,565	0/1:1,6:11:0:1,0,0	0/1:4,3:12:19.93:64,0,20	1/1:8,4:16:2.46:332,2,0	0/1:21,7:21:99:465,0,240	1/1:5,8:16:29.66:656,30,0	0/0:32,0:30:63.68:0,64,1826	0/0:24,0:23:40.87:0,41,1079	1/1:6,10:24:30.73:595,31,0	1/1:5,2:12:17.33:491,17,0	0/1:2,8:16:5.79:183,0,6	0/1:2,14:23:40.86:72,0,41	0/1:34,0:35:7.13:7,0,1732	0/1:8,4:12:19.59:327,0,20	1/1:7,1:6:9.50:146,10,0	0/1:9,3:11:99:297,0,136	1/1:3,3:6:0.89:2,1,0	0/0:23,9:23:5.84:0,6,71	0/0:0,15:21:2.03:0,2,6	0/1:2,1:7:0:0,0,0	0/0:10,2:14:3.01:0,3,49	1/1:2,10:17:4.56:76,5,0	0/1:6,9:14:71.63:629,0,72	1/1:3,6:10:23.44:382,23,0	1/1:1,0:1:3.01:62,3,0
chr10	108737456	.	ATGC	A	2208.91	PASS	AB=0.820;AC=26;AF=0.464;AN=56;BaseQRankSum=7.283;DP=555;FS=21.573;HRun=0;HaplotypeScore=170.8460;InbreedingCoeff=0.0508;MQ=40.73;MQ0=40;MQRankSum=-5.783;QD=8.24;ReadPosRankSum=0.406;VQSLOD=1.9267;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,1:16:36.68:37,0,70	0/0:11,0:11:21.06:0,21,436	0/0:80,0:9:23.97:0,24,314	0/0:71,0:10:29.55:0,30,487	0/1:6,5:11:0.12:1,0,0	0/1:6,5:11:25.96:26,0,50	0/1:8,4:12:36.60:141,0,37	0/1:29,1:22:99:192,0,524	1/1:10,6:15:14.82:302,15,0	0/0:31,0:29:74.47:0,74,1393	0/0:22,0:22:38.88:0,39,802	1/1:12,11:22:27.23:324,27,0	0/1:5,6:11:17.49:324,0,17	1/1:10,7:16:11.19:121,11,0	0/1:17,6:23:20.58:57,0,21	0/0:33,1:34:35.12:0,35,1279	0/1:9,1:10:82.41:151,0,82	1/1:5,0:4:0.49:43,0,0	0/1:10,1:10:63.95:130,0,64	0/0:3,0:3:0:0,0,0	0/1:24,0:20:11.40:11,0,23	0/0:15,6:21:2.04:0,2,6	0/1:2,4:6:0.02:0,0,0	0/0:8,5:11:2.99:0,3,24	1/1:11,4:15:3.01:34,3,0	0/1:14,1:13:98.12:275,0,98	1/1:8,2:10:1.86:160,2,0	1/1:1,1:1:3.01:39,3,0
chr10	108737471	.	ACT	A	278.67	PASS	AB=0.963;AC=20;AF=0.400;AN=50;BaseQRankSum=-1.763;DP=571;FS=5.389;HRun=0;HaplotypeScore=194.3295;InbreedingCoeff=0.2218;MQ=41.73;MQ0=27;MQRankSum=-0.644;QD=1.01;ReadPosRankSum=-0.829;VQSLOD=2.3179;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:17:0:0,0,0	0/1:5,1:6:26.48:26,0,39	./.	./.	0/0:18,0:18:2.35:0,2,7	0/0:12,0:12:5.91:0,6,24	0/0:16,0:16:4.21:0,4,23	1/1:45,0:38:12.70:67,13,0	0/1:18,0:15:1.28:1,0,9	0/1:29,0:29:77.17:77,0,198	1/1:15,1:15:7.55:76,8,0	0/0:26,0:24:20.33:0,20,146	0/0:14,0:14:8.95:0,9,69	0/0:22,0:21:14.86:0,15,106	0/0:27,0:27:20.23:0,20,142	0/1:18,3:22:33.91:34,0,220	1/1:14,0:13:0.74:24,1,0	1/1:8,0:6:5.60:26,6,0	0/1:18,0:18:7.12:12,0,7	0/1:10,0:9:3.46:3,0,28	1/1:34,0:24:1.25:11,1,0	0/0:24,0:22:5.66:0,6,33	0/0:11,0:12:10.58:0,11,69	0/0:11,0:9:2.97:0,3,20	0/0:18,0:16:1.24:0,1,3	1/1:24,0:22:7.60:40,8,0	0/1:14,0:13:4.76:26,0,5	./.
chr10	108737500	.	CTCTCT	C	1726.51	PASS	AB=0.979;AC=19;AF=0.339;AN=56;BaseQRankSum=4.786;DP=502;FS=11.333;HRun=0;HaplotypeScore=151.7318;InbreedingCoeff=-0.1818;MQ=34.72;MQ0=51;MQRankSum=-5.600;QD=5.91;ReadPosRankSum=-2.999;VQSLOD=1.2610;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,3:13:11.99:139,12,0	0/0:9,0:9:24.08:0,24,409	0/0:16,0:4:12.03:0,12,138	0/0:28,0:8:21.07:0,21,259	0/0:20,0:17:4.59:0,5,17	0/1:10,0:9:54.94:55,0,75	0/1:18,1:9:39.70:40,0,40	0/1:32,1:30:54.53:405,0,55	0/1:19,0:14:48.85:109,0,49	0/0:32,0:32:86.68:0,87,1519	0/0:21,0:19:39.59:0,40,579	0/1:23,0:21:49.58:50,0,290	0/0:11,0:11:14.53:0,15,195	0/0:16,0:14:14.79:0,15,111	0/1:26,0:26:27.71:28,0,255	0/0:20,0:20:44.12:0,44,983	0/1:11,0:10:46.90:135,0,47	0/1:7,0:5:12.51:134,0,13	0/1:11,1:11:71.17:104,0,71	0/1:12,0:9:21.72:72,0,22	0/1:28,1:17:6.99:64,0,7	0/0:22,0:19:8.98:0,9,74	0/0:15,0:15:8.20:0,8,113	0/1:11,0:8:11.61:14,0,12	0/1:24,0:17:3.37:135,0,3	0/1:22,0:16:93.22:189,0,93	0/1:9,0:8:6.44:178,0,6	1/1:6,0:2:3.01:40,3,0
chr10	108737502	.	CTCT	C	3092.39	PASS	AB=0.949;AC=29;AF=0.518;AN=56;BaseQRankSum=5.010;DP=485;FS=10.444;HRun=0;HaplotypeScore=135.1732;InbreedingCoeff=0.2527;MQ=36.88;MQ0=49;MQRankSum=-5.535;QD=9.88;ReadPosRankSum=0.103;VQSLOD=2.3959;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,1:13:11.89:140,12,0	0/0:9,0:9:23.94:0,24,327	0/0:16,0:5:15.03:0,15,175	0/0:29,0:9:21.06:0,21,259	1/1:16,2:15:5.68:33,6,0	0/1:9,1:9:46.30:127,0,46	0/1:19,0:9:11.69:58,0,12	1/1:8,23:28:33.69:695,34,0	0/1:18,1:14:14.28:260,0,14	0/0:31,0:31:83.14:0,83,1223	0/0:19,0:17:30.51:0,31,425	0/1:23,0:21:79.05:79,0,155	0/0:11,0:11:3.55:0,4,98	0/0:16,0:14:1.27:0,1,12	0/1:26,0:26:56.26:56,0,63	0/0:18,0:19:43.87:0,44,752	1/1:9,2:10:4.58:255,5,0	0/1:7,0:5:19.24:175,0,19	0/1:9,2:10:2.21:190,0,2	1/1:12,0:9:8.31:163,8,0	1/1:30,0:16:8.65:118,9,0	0/0:22,0:19:7.89:0,8,40	0/1:14,0:14:9.70:10,0,54	1/1:9,0:6:3.85:22,4,0	1/1:22,0:15:14.10:167,14,0	0/1:17,3:14:3.20:364,0,3	1/1:8,1:8:24.05:321,24,0	1/1:6,0:2:3.01:40,3,0
chr10	108737504	.	CT	C	3634.36	PASS	AB=0.792;AC=36;AF=0.643;AN=56;BaseQRankSum=6.148;DP=478;FS=1.447;HRun=1;HaplotypeScore=124.7799;InbreedingCoeff=0.3213;MQ=40.81;MQ0=48;MQRankSum=-5.338;QD=10.30;ReadPosRankSum=1.822;VQSLOD=1.8121;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,9:13:11.99:140,12,0	0/0:9,0:9:23.10:0,23,281	0/0:18,0:7:18.03:0,18,193	0/0:30,0:11:27.06:0,27,315	1/1:6,11:14:5.90:82,6,0	0/1:3,7:9:29.23:167,0,29	1/1:4,15:9:8.99:104,9,0	1/1:28,2:27:41.71:512,42,0	0/1:5,13:13:7.35:334,0,7	0/0:30,0:30:83.36:0,83,1005	0/0:18,0:17:35.59:0,36,385	0/1:21,1:20:85.67:162,0,86	0/1:9,1:10:14.69:15,0,36	1/1:16,0:14:13.28:87,13,0	0/1:24,3:27:10.79:157,0,11	0/0:20,0:20:46.08:0,46,588	1/1:2,8:9:21.07:267,21,0	0/1:1,6:5:16.42:134,0,16	1/1:9,1:9:18.28:235,18,0	1/1:3,9:9:17.96:185,18,0	1/1:8,22:16:9.03:116,9,0	0/1:22,0:19:4.03:11,0,4	0/1:11,2:13:11.67:47,0,12	1/1:8,1:6:5.95:42,6,0	1/1:4,18:15:26.68:201,27,0	1/1:10,9:13:0.74:311,1,0	1/1:2,7:8:24.06:286,24,0	1/1:1,5:2:3.01:40,3,0
chr10	108737505	.	T	TC	3564.59	PASS	AB=0.778;AC=38;AF=0.679;AN=56;BaseQRankSum=7.709;DP=478;FS=5.767;HRun=1;HaplotypeScore=128.8122;InbreedingCoeff=0.4395;MQ=41.49;MQ0=47;MQRankSum=-5.612;QD=10.07;ReadPosRankSum=1.904;VQSLOD=1.5877;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,1:13:12:140,12,0	0/0:9,0:9:23.99:0,24,285	0/0:17,0:8:18.03:0,18,194	0/0:31,0:14:27.07:0,27,318	1/1:16,2:15:5.86:57,6,0	0/1:9,0:8:20.44:109,0,20	1/1:16,3:9:9:108,9,0	1/1:26,2:26:20.59:358,21,0	0/1:16,3:14:4.81:200,0,5	0/0:30,0:30:84.64:0,85,1013	0/0:17,0:16:35.83:0,36,394	0/1:8,15:21:67.62:306,0,68	0/1:4,1:10:26.17:82,0,26	1/1:5,12:15:14.75:207,15,0	0/1:7,14:27:4.69:302,0,5	0/0:20,0:20:47.63:0,48,525	1/1:10,0:9:20.98:219,21,0	0/1:7,0:5:5.77:94,0,6	1/1:6,4:9:18.99:218,19,0	1/1:9,3:9:17.96:205,18,0	1/1:26,3:16:8.75:71,9,0	1/1:7,9:20:6.90:53,7,0	1/1:2,3:13:16.14:126,16,0	1/1:3,6:6:5.98:62,6,0	1/1:19,3:15:26.71:181,27,0	1/1:16,2:12:1.27:208,1,0	1/1:9,0:8:22.79:218,23,0	1/1:6,0:2:3.01:40,3,0
chr10	108737556	.	G	GACACAC	5962.11	PASS	AB=0.825;AC=42;AF=0.778;AN=54;BaseQRankSum=6.747;DP=349;FS=34.935;HRun=0;HaplotypeScore=101.5536;InbreedingCoeff=0.5716;MQ=63.12;MQ0=18;MQRankSum=-6.686;QD=26.04;ReadPosRankSum=0.711;VQSLOD=2.6157;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:7:2.96:19,3,0	0/0:4,0:4:12.03:0,12,238	0/0:35,0:22:59.34:0,59,904	0/0:44,0:37:29.60:0,30,1126	0/1:8,0:11:2.58:376,0,3	1/1:4,0:4:3.48:80,3,0	1/1:13,0:7:5.58:103,6,0	1/1:13,0:13:20.91:190,21,0	1/1:5,0:4:6.02:158,6,0	0/0:24,0:24:63.11:0,63,1230	0/0:5,0:5:15.02:0,15,241	1/1:7,4:10:15.02:306,15,0	1/1:3,2:6:9.03:297,9,0	1/1:6,2:7:2.99:23,3,0	1/1:9,6:14:18.51:449,19,0	0/1:12,0:13:46.01:46,0,615	1/1:3,2:4:5.48:200,5,0	1/1:4,3:5:9.50:301,10,0	1/1:10,0:10:13.07:73,13,0	1/1:6,8:13:30.03:904,30,0	1/1:16,0:13:8.84:130,9,0	1/1:5,3:6:9.03:299,9,0	1/1:9,3:12:18.04:443,18,0	./.	1/1:9,0:13:5.18:533,5,0	1/1:9,5:12:24.07:647,24,0	1/1:4,2:6:13.57:286,14,0	1/1:3,1:2:3.01:99,3,0
chr10	108737558	.	CAG	C	753.60	PASS	AB=0.906;AC=20;AF=0.357;AN=56;BaseQRankSum=-0.782;DP=347;FS=4.859;HRun=0;HaplotypeScore=100.3297;InbreedingCoeff=0.0619;MQ=63.10;MQ0=17;MQRankSum=-0.346;QD=4.33;ReadPosRankSum=-7.014;VQSLOD=-0.1135;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:8:2.96:19,3,0	0/0:4,0:4:12.03:0,12,198	0/0:34,0:21:50.53:0,51,912	0/0:44,0:37:70.36:0,70,1042	0/0:11,2:11:9.91:0,10,39	0/0:5,0:4:5.42:0,5,26	0/1:10,2:7:13.39:19,0,13	1/1:15,0:14:20.32:181,20,0	0/0:7,0:4:4.87:0,5,17	0/0:22,0:22:63.20:0,63,1112	0/0:5,0:5:15.01:0,15,191	0/1:8,3:10:13.34:70,0,13	0/0:5,0:6:6.68:0,7,22	1/1:6,3:7:5.04:67,5,0	0/1:12,3:14:13.72:78,0,14	0/0:13,0:13:35.15:0,35,575	0/1:5,0:4:6.98:11,0,7	0/1:7,0:5:11.05:14,0,11	0/1:11,0:11:9.04:113,0,9	0/1:15,0:13:34.40:34,0,43	1/1:16,0:14:6.09:84,6,0	0/1:5,3:6:14.59:15,0,16	0/1:9,2:11:34.67:55,0,35	0/1:7,1:7:0.95:19,0,1	0/0:15,1:13:19.65:0,20,80	0/1:14,1:12:27.80:68,0,28	0/1:6,0:6:2.24:73,0,2	0/0:4,0:2:2.22:0,2,7
chr10	108737874	.	TG	T	13502.67	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=11.500;DP=566;FS=0.000;HRun=5;HaplotypeScore=127.8803;InbreedingCoeff=0.9852;MQ=86.80;MQ0=0;MQRankSum=-5.818;QD=28.79;ReadPosRankSum=3.869;VQSLOD=3.4166;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,52:58:99:1468,114,0	0/0:5,0:5:15.05:0,15,205	0/0:24,0:24:57.17:0,57,752	0/0:21,0:21:54.17:0,54,720	1/1:1,12:13:33.09:374,33,0	1/1:0,13:13:36.10:408,36,0	1/1:1,36:37:99:1190,105,0	1/1:1,35:36:99:1103,99,0	1/1:4,16:20:45.12:506,45,0	0/0:14,0:14:36.10:0,36,474	0/0:5,0:5:15.05:0,15,205	1/1:0,24:24:66.19:748,66,0	1/1:2,12:14:30.09:340,30,0	1/1:0,12:12:36.10:408,36,0	1/1:3,31:34:84.24:952,84,0	0/0:27,1:28:47.20:0,47,989	1/1:2,25:27:75.21:851,75,0	1/1:1,18:19:54.15:612,54,0	1/1:3,22:25:60.17:680,60,0	1/1:1,5:6:15.04:169,15,0	1/1:1,39:40:99:1191,106,0	1/1:1,9:10:24.07:272,24,0	1/1:1,6:7:15.04:170,15,0	1/1:2,28:30:75.19:839,75,0	1/1:3,8:11:27.08:306,27,0	1/1:2,11:13:33.09:373,33,0	1/1:1,12:13:27.08:305,27,0	1/1:1,6:7:21.06:233,21,0
chr10	108737879	.	GT	G	3709.88	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=15.277;DP=567;FS=1.225;HRun=1;HaplotypeScore=160.7773;InbreedingCoeff=0.5589;MQ=89.79;MQ0=0;MQRankSum=-7.005;QD=7.91;ReadPosRankSum=7.592;VQSLOD=0.7455;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:57,3:60:4.90:404,5,0	0/0:5,0:5:15.05:0,15,229	0/0:23,0:23:69.13:0,69,949	0/0:26,0:26:47.78:0,48,832	0/1:14,0:14:13.29:121,0,13	1/1:14,0:14:9.74:93,10,0	0/1:41,0:41:17.12:270,0,17	0/1:40,0:40:74.81:162,0,75	1/1:17,1:18:18.61:185,19,0	0/0:11,0:11:33.11:0,33,506	0/0:6,0:6:18.05:0,18,245	1/1:25,0:25:43.61:262,44,0	1/1:13,0:13:4.49:87,4,0	1/1:12,0:12:31.31:124,31,0	1/1:33,0:33:29.39:238,29,0	0/0:27,0:27:62.67:0,63,1044	1/1:26,0:26:44.59:228,45,0	1/1:18,0:18:47.16:194,47,0	0/1:23,0:23:0.70:102,0,1	1/1:5,1:6:13.78:83,14,0	1/1:40,0:40:68.56:318,69,0	1/1:10,0:10:2.80:84,3,0	1/1:6,0:6:13.35:57,13,0	1/1:29,0:29:42.04:247,42,0	1/1:8,1:9:24.29:120,24,0	1/1:12,0:12:2.21:92,2,0	1/1:13,0:13:3.89:128,4,0	1/1:6,0:7:20.14:112,20,0
chr10	108738283	.	A	AC	16834.73	PASS	AB=0.929;AC=45;AF=0.804;AN=56;BaseQRankSum=1.992;DP=659;FS=8.875;HRun=6;HaplotypeScore=93.5748;InbreedingCoeff=0.9338;MQ=83.84;MQ0=0;MQRankSum=-5.180;QD=29.69;ReadPosRankSum=3.282;VQSLOD=4.9566;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,36:42:93.30:1169,93,0	0/0:14,0:14:39.09:0,39,398	0/0:24,0:24:59.49:0,59,584	0/0:18,0:18:42.09:0,42,426	1/1:4,24:28:57.18:717,57,0	1/1:1,20:21:57.18:717,57,0	1/1:3,21:24:54.17:674,54,0	1/1:4,21:25:57.10:691,57,0	1/1:4,22:26:63.20:790,63,0	0/0:18,0:18:45.09:0,45,451	0/1:12,1:13:1.66:2,0,299	1/1:2,16:18:45.14:566,45,0	1/1:3,18:22:51.16:638,51,0	1/1:1,20:21:39.12:485,39,0	1/1:3,21:24:60.14:736,60,0	0/0:18,0:18:48.10:0,48,483	1/1:3,36:39:99:1245,99,0	1/1:2,22:24:66.21:830,66,0	1/1:4,24:28:75.23:930,75,0	1/1:0,16:16:45.14:565,45,0	1/1:1,57:58:99:1924,153,0	1/1:1,19:20:45.12:550,45,0	1/1:2,9:11:24.08:297,24,0	1/1:4,22:26:63.20:793,63,0	1/1:3,25:28:72.23:906,72,0	1/1:3,20:23:35.51:741,36,0	1/1:0,20:20:42.13:528,42,0	1/1:0,10:10:27.09:340,27,0
chr10	108739690	.	AAAAC	A	15308.15	PASS	AB=0.538;AC=42;AF=0.750;AN=56;BaseQRankSum=5.156;DP=485;FS=2.102;HRun=0;HaplotypeScore=91.4573;InbreedingCoeff=0.7654;MQ=72.23;MQ0=0;MQRankSum=-4.775;QD=41.60;ReadPosRankSum=3.079;VQSLOD=5.2030;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:34.62:1202,35,0	0/0:10,0:10:30.10:0,30,737	0/0:32,0:24:36.03:0,36,1130	0/0:29,0:18:3.32:0,3,473	1/1:2,27:29:75.21:1310,75,0	1/1:3,16:19:36.12:645,36,0	1/1:0,13:13:30.10:538,30,0	1/1:5,14:19:42.12:683,42,0	1/1:1,9:10:21.07:377,21,0	0/0:23,0:23:69.24:0,69,1793	0/0:15,0:15:42.14:0,42,1080	1/1:0,14:13:33.11:593,33,0	1/1:0,10:10:24.08:431,24,0	1/1:1,9:9:24.08:431,24,0	0/1:2,11:13:50.88:404,0,51	0/0:8,0:8:24.08:0,24,623	1/1:1,21:22:54.19:970,54,0	1/1:1,18:19:42.14:755,42,0	1/1:1,17:18:51.17:865,51,0	1/1:1,25:26:63.22:1130,63,0	1/1:0,10:10:21.07:377,21,0	1/1:0,7:7:15.05:270,15,0	1/1:2,5:7:15.05:270,15,0	1/1:0,8:8:15.05:270,15,0	1/1:0,26:26:75.26:1348,75,0	0/1:3,20:23:99:930,0,168	1/1:2,18:20:42.14:755,42,0	1/1:0,15:15:42.14:755,42,0
chr10	108741900	.	C	CT	1799.17	PASS	AC=40;AF=0.769;AN=52;BaseQRankSum=9.366;DP=212;FS=6.468;HRun=1;HaplotypeScore=72.2339;InbreedingCoeff=0.7407;MQ=92.35;MQ0=2;MQRankSum=-9.215;QD=18.74;ReadPosRankSum=1.404;VQSLOD=3.7291;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:2:5.98:64,6,0	0/0:7,0:7:18.06:0,18,233	0/0:34,1:17:39.10:0,39,486	0/0:34,0:23:17.15:0,17,418	1/1:2,1:7:17.39:163,17,0	1/1:1,5:7:11.97:103,12,0	1/1:1,0:1:3.01:30,3,0	1/1:1,2:3:8.22:60,8,0	1/1:1,3:6:2.98:21,3,0	0/0:19,0:19:51.17:0,51,661	0/0:5,0:5:15.05:0,15,195	1/1:1,1:5:12.01:135,12,0	1/1:1,2:3:8.93:69,9,0	1/1:0,2:3:9.02:101,9,0	1/1:2,4:7:15:157,15,0	0/0:13,0:13:36.12:0,36,466	1/1:1,1:2:2.94:18,3,0	1/1:3,0:3:6.01:62,6,0	1/1:4,1:6:2.98:21,3,0	1/1:2,4:6:18.01:176,18,0	./.	1/1:3,2:5:11.93:108,12,0	1/1:3,1:4:12.02:126,12,0	./.	1/1:1,3:5:15:145,15,0	1/1:2,5:8:18.03:207,18,0	1/1:3,3:6:9:105,9,0	1/1:4,2:6:9.02:107,9,0
chr10	108741904	.	TG	T	455.28	PASS	AC=36;AF=0.720;AN=50;BaseQRankSum=8.985;DP=190;FS=18.898;HRun=3;HaplotypeScore=61.1229;InbreedingCoeff=0.6808;MQ=89.50;MQ0=5;MQRankSum=-7.872;QD=7.34;ReadPosRankSum=4.422;VQSLOD=-0.5965;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:1:2.68:11,3,0	0/0:7,0:7:21:0,21,274	0/0:37,2:15:36.09:0,36,474	0/0:36,0:20:22.03:0,22,358	1/1:5,0:5:12.73:50,13,0	1/1:1,5:6:8.44:40,8,0	./.	1/1:0,2:2:5.87:35,6,0	1/1:3,1:5:1.82:5,2,0	0/0:22,0:21:54.17:0,54,739	0/0:7,0:7:17.88:0,18,206	1/1:3,1:4:7.58:32,8,0	1/1:0,1:2:5.55:29,6,0	1/1:1,0:3:8.81:72,9,0	1/1:1,2:5:11.14:51,11,0	0/0:12,0:12:30.09:0,30,412	1/1:0,1:1:2.50:9,2,0	1/1:1,0:1:2.88:15,3,0	0/0:2,0:3:2.92:0,3,17	1/1:2,2:5:14.12:70,14,0	./.	1/1:2,2:4:8.04:34,8,0	1/1:0,0:1:2.74:12,3,0	./.	1/1:2,3:5:13.36:57,13,0	1/1:3,3:6:9.92:49,10,0	1/1:2,2:3:7.51:28,8,0	1/1:1,1:2:5.74:30,6,0
chr10	108741911	.	G	GT	632.10	PASS	AB=0.919;AC=26;AF=0.500;AN=52;BaseQRankSum=1.886;DP=251;FS=0.700;HRun=3;HaplotypeScore=76.3624;InbreedingCoeff=0.3758;MQ=66.74;MQ0=12;MQRankSum=-5.001;QD=6.02;ReadPosRankSum=-2.168;VQSLOD=-0.2870;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,1:3:2.22:0,2,7	0/0:9,0:9:7.49:0,7,188	0/0:39,0:12:9.10:0,9,168	0/0:33,0:14:20.55:0,21,162	0/1:8,1:9:11.81:31,0,12	0/1:7,1:8:1.95:20,0,2	./.	0/1:5,3:7:1.77:64,0,2	1/1:7,2:9:5.36:73,5,0	0/0:29,0:27:46.96:0,47,550	0/1:7,0:7:2.72:3,0,111	0/1:4,0:4:1.53:2,0,5	0/0:3,0:3:0.45:0,0,14	1/1:5,0:5:4.43:30,4,0	0/0:5,0:5:1.46:0,1,8	0/0:13,0:13:12.30:0,12,287	0/0:1,0:1:2.80:0,3,13	1/1:3,0:2:0.47:1,0,0	1/1:4,0:4:3.01:32,3,0	1/1:5,2:6:11.59:87,12,0	./.	0/0:4,0:4:7.46:0,7,28	0/1:5,0:4:0.56:6,0,1	1/1:3,0:3:0.47:1,0,0	1/1:7,1:8:9.50:122,9,0	1/1:9,4:11:7.08:176,7,0	1/1:7,1:7:1.67:76,2,0	1/1:2,2:3:8.10:54,8,0
chr10	108741917	.	T	TTTG	1435.53	PASS	AB=0.962;AC=32;AF=0.615;AN=52;BaseQRankSum=5.585;DP=308;FS=22.718;HRun=0;HaplotypeScore=97.0981;InbreedingCoeff=0.4256;MQ=52.12;MQ0=22;MQRankSum=-6.536;QD=9.32;ReadPosRankSum=4.036;VQSLOD=1.2461;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:2.90:16,3,0	0/0:9,0:9:18.20:0,18,242	0/0:40,0:9:5.96:0,6,93	0/0:34,0:11:2.82:0,3,75	1/1:13,0:12:9.39:100,9,0	0/1:10,1:10:1.50:204,0,2	./.	0/1:13,0:11:31.92:32,0,32	1/1:11,0:11:13.85:117,14,0	0/0:34,0:31:80.10:0,80,853	0/0:11,0:11:17.84:0,18,182	1/1:4,0:4:2.81:11,3,0	1/1:5,0:5:7.39:58,7,0	0/1:5,1:5:3.15:85,0,3	1/1:5,0:5:11.71:166,12,0	0/0:15,0:15:40.51:0,41,494	1/1:2,0:2:2.92:17,3,0	0/0:5,0:2:0.89:0,1,2	0/1:8,0:7:1.50:1,0,14	1/1:9,0:8:13.52:109,14,0	./.	1/1:6,1:6:8.76:101,9,0	0/1:7,0:6:2.02:72,0,2	1/1:2,1:3:2.98:22,3,0	1/1:13,0:13:25.56:246,26,0	1/1:16,0:13:18.27:119,18,0	1/1:9,0:8:12.63:81,13,0	0/1:9,0:7:4.84:42,0,5
chr10	108741931	.	TTTG	T	337.83	PASS	AB=0.921;AC=22;AF=0.423;AN=52;BaseQRankSum=6.280;DP=300;FS=1.384;HRun=0;HaplotypeScore=80.5439;InbreedingCoeff=0.2074;MQ=42.91;MQ0=26;MQRankSum=-3.146;QD=3.10;ReadPosRankSum=-1.579;VQSLOD=0.9096;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:0.89:2,1,0	0/0:8,0:7:17.82:0,18,190	0/0:32,0:5:11.62:0,12,102	0/0:35,0:9:5.71:0,6,62	0/1:11,0:10:28.66:29,0,41	0/1:10,2:11:53.34:53,0,85	1/1:2,0:1:2.88:15,3,0	0/0:12,0:10:19.03:0,19,136	0/1:8,2:10:6.20:25,0,6	0/0:34,0:31:85.28:0,85,1199	0/0:12,0:12:26.11:0,26,355	0/0:2,0:2:5.90:0,6,36	0/1:3,1:4:17:21,0,17	0/0:6,0:5:9.26:0,9,60	1/1:5,0:5:5.97:23,6,0	0/0:15,0:15:44.14:0,44,631	./.	1/1:5,0:2:5.58:27,6,0	0/1:8,0:6:7.17:23,0,7	1/1:10,0:9:14.17:87,14,0	./.	0/1:6,0:5:3.77:4,0,20	0/1:7,0:6:15.07:40,0,15	1/1:3,0:3:2.96:19,3,0	0/1:12,2:14:24.33:60,0,24	0/0:16,0:14:5.54:0,6,162	0/0:7,0:6:4.74:0,5,41	1/1:9,0:7:9.18:73,9,0
chr10	108741935	.	GT	G	446.86	PASS	AB=0.917;AC=20;AF=0.385;AN=52;BaseQRankSum=2.611;DP=304;FS=4.034;HRun=7;HaplotypeScore=72.9589;InbreedingCoeff=0.3259;MQ=37.57;MQ0=29;MQRankSum=-5.893;QD=3.85;ReadPosRankSum=-0.361;VQSLOD=-0.5064;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:8,0:7:15.91:0,16,165	0/0:33,1:7:6.42:0,6,57	0/0:38,0:8:7.33:0,7,57	1/1:11,0:10:15.82:109,16,0	1/1:9,2:10:6.66:60,7,0	0/1:3,0:2:0:0,0,0	1/1:9,3:10:11.49:106,11,0	0/1:9,0:9:1.34:1,0,5	0/0:33,0:30:68.43:0,68,832	0/0:11,0:11:21.07:0,21,263	0/0:1,0:1:1.25:0,1,3	0/1:3,1:4:3.05:39,0,3	0/0:6,0:5:2.97:0,3,20	0/1:4,0:4:1.21:2,0,1	0/0:17,0:17:47.42:0,47,534	0/0:4,0:4:2.88:0,3,15	1/1:4,0:1:2.90:16,3,0	0/0:8,2:8:0.77:0,1,2	0/1:10,1:10:4.39:27,0,4	./.	0/1:5,1:5:11.46:24,0,11	1/1:6,1:6:5.35:63,5,0	1/1:3,1:3:0.89:2,1,0	0/1:13,2:14:9.33:97,0,9	0/1:13,2:12:7.94:45,0,8	0/0:7,0:6:1.82:0,2,5	0/0:10,1:9:13.24:0,13,59
chr10	108741942	.	TG	T	850.11	PASS	AB=0.978;AC=38;AF=0.760;AN=50;BaseQRankSum=7.438;DP=263;FS=6.541;HRun=1;HaplotypeScore=60.4123;InbreedingCoeff=0.5626;MQ=31.80;MQ0=25;MQRankSum=-7.663;QD=5.48;ReadPosRankSum=-2.434;VQSLOD=-0.5219;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/1:8,0:7:1.96:2,0,108	0/1:21,1:5:3.78:4,0,54	0/0:39,1:4:4.10:0,4,55	1/1:7,1:7:14.23:80,14,0	1/1:8,2:9:22.48:123,22,0	1/1:2,1:2:5.87:36,6,0	1/1:10,1:10:10.56:38,11,0	1/1:8,0:8:13.52:67,14,0	0/0:27,0:25:65.90:0,66,869	0/0:12,0:12:26.97:0,27,309	1/1:1,0:1:2.74:12,3,0	1/1:3,1:4:10.80:52,11,0	0/0:3,1:3:0.89:0,1,2	1/1:4,0:4:10.42:52,10,0	0/0:16,0:16:38.86:0,39,487	1/1:3,1:4:1.82:5,2,0	1/1:3,0:1:2.90:16,3,0	1/1:8,2:7:5.44:27,5,0	1/1:6,1:7:16.61:83,17,0	./.	1/1:6,0:5:6.55:31,7,0	1/1:5,2:6:14.08:87,14,0	./.	1/1:11,3:14:26.80:163,27,0	1/1:11,0:8:8.87:47,9,0	1/1:3,1:3:0.89:2,1,0	1/1:10,0:8:5.18:74,5,0
chr10	108741951	.	TTG	T	1240.45	PASS	AB=0.881;AC=31;AF=0.646;AN=48;BaseQRankSum=8.262;DP=242;FS=4.495;HRun=0;HaplotypeScore=55.0088;InbreedingCoeff=0.3638;MQ=33.70;MQ0=20;MQRankSum=-7.419;QD=10.98;ReadPosRankSum=-0.274;VQSLOD=2.5378;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:6:1.29:0,1,111	0/0:20,0:5:11.80:0,12,146	0/0:38,0:4:11.31:0,11,113	1/1:6,3:8:20.90:213,21,0	0/1:8,0:8:27.42:59,0,27	0/1:3,0:2:10.95:23,0,11	0/1:7,5:11:47.83:48,0,77	1/1:4,1:5:3.90:48,4,0	0/0:21,0:21:60.20:0,60,1017	0/0:14,0:14:36.11:0,36,564	1/1:1,0:1:2.68:11,3,0	0/1:4,0:4:7.58:34,0,8	1/1:3,1:4:3.01:43,3,0	1/1:3,0:3:8.17:40,8,0	0/0:18,0:18:54.17:0,54,837	1/1:3,1:4:3.01:46,3,0	./.	1/1:7,3:8:9.03:128,9,0	1/1:8,0:8:9.01:65,9,0	./.	1/1:3,2:4:6.02:79,6,0	0/1:4,3:6:1.23:98,0,1	./.	1/1:13,0:12:16.96:128,17,0	1/1:5,0:4:7.53:68,8,0	1/1:3,1:3:1.25:3,1,0	1/1:3,5:7:21:267,21,0
chr10	108741953	.	G	GGTT	2513.17	PASS	AB=0.889;AC=30;AF=0.625;AN=48;BaseQRankSum=6.460;DP=244;FS=0.000;HRun=0;HaplotypeScore=59.4722;InbreedingCoeff=0.3344;MQ=33.83;MQ0=18;MQRankSum=-7.663;QD=21.12;ReadPosRankSum=-0.497;VQSLOD=2.6397;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:5,0:5:14.94:0,15,145	0/0:21,0:5:11.03:0,11,136	0/0:35,0:4:5.27:0,5,95	1/1:9,2:10:21.04:342,21,0	0/1:5,3:8:3.22:151,0,3	0/1:2,1:2:7.78:65,0,8	0/1:14,0:13:30.89:82,0,31	1/1:3,0:3:5.89:80,6,0	0/0:20,0:20:60.20:0,60,1082	0/0:13,0:13:33.11:0,33,608	0/1:3,0:3:8.87:88,0,9	1/1:2,1:3:8.39:123,8,0	1/1:4,0:4:3:63,3,0	0/1:4,0:4:28.93:29,0,32	0/0:19,0:19:57.16:0,57,898	1/1:3,2:5:3.01:43,3,0	1/1:5,0:3:3.01:65,3,0	1/1:10,0:7:9.03:190,9,0	1/1:8,3:11:3.62:139,4,0	./.	1/1:6,0:6:8.99:138,9,0	0/1:5,1:5:14.41:141,0,14	./.	1/1:3,7:9:18.06:352,18,0	1/1:4,2:5:14.87:215,15,0	./.	1/1:5,2:7:21.07:373,21,0
chr10	108742240	.	TGTGTGTG	T	2768.05	PASS	AC=20;AF=0.385;AN=52;BaseQRankSum=8.220;DP=437;FS=6.232;HRun=0;HaplotypeScore=108.6507;InbreedingCoeff=0.9030;MQ=42.14;MQ0=81;MQRankSum=-6.768;QD=21.80;ReadPosRankSum=1.985;VQSLOD=2.7023;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:24:45.50:0,45,922	0/0:5,0:5:12:0,12,269	0/0:31,0:5:15.05:0,15,326	0/0:46,0:20:60.20:0,60,1316	./.	1/1:5,13:15:24.08:454,24,0	1/1:3,11:12:12.04:246,12,0	0/0:19,0:17:48.16:0,48,1274	1/1:6,10:11:8.90:485,9,0	0/0:14,0:11:33.11:0,33,1045	0/0:12,0:9:27.09:0,27,879	1/1:4,11:14:15.05:371,15,0	1/1:4,9:10:21.54:471,22,0	1/1:3,6:8:12.04:264,12,0	1/1:5,4:4:9.03:207,9,0	0/0:15,0:14:36.59:0,37,1109	0/0:27,0:24:66.13:0,66,1512	0/0:17,0:16:39.60:0,40,1090	0/0:8,0:6:12.04:0,12,366	0/0:12,0:9:18.02:0,18,423	0/0:40,0:28:35.81:0,36,969	1/1:3,8:8:6.02:76,6,0	./.	1/1:8,9:15:9.96:206,10,0	1/1:2,3:3:9.03:188,9,0	0/0:18,0:13:33.11:0,33,802	0/0:8,0:6:15.05:0,15,464	0/0:5,0:4:6.02:0,6,154
chr10	108742246	.	TG	T	787.05	PASS	AC=20;AF=0.385;AN=52;BaseQRankSum=10.160;DP=457;FS=5.966;HRun=2;HaplotypeScore=98.2543;InbreedingCoeff=0.9129;MQ=49.11;MQ0=72;MQRankSum=-7.616;QD=6.30;ReadPosRankSum=1.188;VQSLOD=0.7777;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:24:48.03:0,48,628	0/0:4,0:4:12:0,12,150	0/0:38,0:12:36.12:0,36,471	0/0:51,0:25:72.21:0,72,940	./.	1/1:17,0:15:22.53:216,23,0	1/1:14,0:12:11.01:94,11,0	0/0:18,0:16:48.16:0,48,714	1/1:14,1:11:21.50:150,22,0	0/0:16,0:13:38.42:0,38,558	0/0:11,1:9:27.09:0,27,404	1/1:14,0:14:12.58:46,13,0	1/1:13,0:10:18.50:121,18,0	1/1:9,0:8:11.11:94,11,0	1/1:8,0:4:8:56,8,0	0/0:16,1:16:42.13:0,42,596	0/0:31,0:28:78.08:0,78,1014	0/0:19,0:18:45.12:0,45,629	0/0:9,0:7:12.04:0,12,180	0/0:12,0:10:18.02:0,18,244	0/0:40,0:30:39:0,39,579	1/1:10,0:8:6.02:76,6,0	./.	1/1:16,4:18:10.30:78,10,0	1/1:5,0:3:8:56,8,0	0/0:19,0:15:39.13:0,39,554	0/0:7,0:6:15.05:0,15,225	0/0:6,0:5:9.02:0,9,115
chr10	108743144	.	G	GCACAAA	27969.90	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=5.404;DP=453;FS=0.000;HRun=0;HaplotypeScore=123.0200;InbreedingCoeff=0.9752;MQ=92.34;MQ0=4;MQRankSum=-15.191;QD=83.99;ReadPosRankSum=2.533;VQSLOD=6.2465;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:25:59.99:1631,60,0	0/0:9,0:9:27.08:0,27,634	0/0:26,0:26:65.65:0,66,1356	0/0:30,0:30:75.77:0,76,1674	1/1:1,6:7:12.51:376,13,0	1/1:2,9:11:30.10:969,30,0	1/1:3,21:26:72.25:2554,72,0	1/1:6,7:14:42.14:1432,42,0	1/1:1,26:28:75.26:2759,75,0	0/0:25,0:25:75.25:0,75,1849	0/0:5,0:5:12.04:0,12,305	1/1:3,16:19:54.19:1865,54,0	1/1:4,14:21:53.75:1827,54,0	1/1:1,10:12:33.11:1191,33,0	1/1:1,12:13:36.12:1278,36,0	0/0:25,0:25:75.24:0,75,1862	1/1:3,9:12:30.10:1012,30,0	1/1:5,1:4:12.04:376,12,0	1/1:1,6:9:21.05:699,21,0	1/1:2,6:8:24.08:610,24,0	1/1:8,14:26:56.98:1393,57,0	1/1:2,8:11:33.07:670,33,0	1/1:1,10:11:27.09:766,27,0	1/1:3,5:11:15.11:531,15,0	1/1:2,10:15:42.14:1400,42,0	1/1:3,18:21:63.22:2315,63,0	1/1:2,15:19:51.17:1712,51,0	1/1:1,5:6:18.06:605,18,0
chr10	108744330	.	T	TAA	4471.98	PASS	AB=0.718;AC=40;AF=0.714;AN=56;BaseQRankSum=2.661;DP=625;FS=0.481;HRun=15;HaplotypeScore=106.1026;InbreedingCoeff=0.2865;MQ=70.84;MQ0=5;MQRankSum=-0.903;QD=8.13;ReadPosRankSum=0.622;VQSLOD=2.8495;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,1:40:50.82:111,0,51	0/0:9,0:10:14.37:0,14,145	0/1:38,0:17:7.02:7,0,29	0/1:43,0:18:15.13:15,0,30	1/1:13,3:26:60.61:579,61,0	1/1:2,12:17:24.06:268,24,0	1/1:11,5:26:36.09:395,36,0	1/1:17,2:30:0.28:181,0,0	1/1:4,3:12:15.03:161,15,0	0/0:24,0:29:45.87:0,46,317	0/0:18,0:22:22.54:0,23,201	1/1:6,16:23:43.94:526,44,0	1/1:5,7:15:14.53:161,15,0	1/1:8,7:18:15.66:164,16,0	1/1:6,13:21:33.10:399,33,0	0/0:12,0:14:35.14:0,35,258	0/1:11,0:26:56.04:56,0,94	0/1:12,1:26:10.80:146,0,11	1/1:6,1:17:22.12:105,22,0	1/1:12,0:19:10.52:85,11,0	1/1:9,0:17:29.06:116,29,0	1/1:3,9:14:25.73:252,26,0	1/1:7,5:16:10.76:93,11,0	1/1:5,9:14:17.42:197,17,0	1/1:11,2:23:24.92:236,25,0	0/1:13,3:30:55.74:159,0,56	0/1:8,0:22:28.17:28,0,42	0/1:3,0:11:6.51:34,0,7
chr10	108745534	.	AAGAG	A	8273.76	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=14.675;DP=580;FS=6.683;HRun=0;HaplotypeScore=102.0391;InbreedingCoeff=0.9972;MQ=68.73;MQ0=2;MQRankSum=-2.408;QD=39.59;ReadPosRankSum=3.094;VQSLOD=4.8861;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.25:0,72,1865	0/0:8,0:8:21.07:0,21,542	0/0:23,0:23:65.19:0,65,1375	0/0:16,0:11:29.81:0,30,587	1/1:3,33:36:87.14:1375,87,0	1/1:1,19:20:54.14:937,54,0	1/1:2,8:10:18.06:323,18,0	0/0:44,0:44:99:0,105,2680	1/1:4,20:24:48.16:863,48,0	0/0:21,0:21:60.21:0,60,1535	0/0:27,0:27:72.25:0,72,1803	1/1:2,11:13:30.10:539,30,0	1/1:1,9:10:24.08:431,24,0	1/1:1,12:13:30.10:522,30,0	1/1:1,23:24:60.08:976,60,0	0/0:19,0:19:51.18:0,51,1268	0/0:27,0:26:75.26:0,75,1921	0/0:33,0:32:90.28:0,90,2282	0/0:16,0:16:48.15:0,48,1156	0/0:29,0:29:84.29:0,84,2154	0/0:15,0:15:36.12:0,36,935	1/1:2,14:16:42.06:665,42,0	1/1:2,14:16:35.75:579,36,0	1/1:1,8:9:21.07:377,21,0	1/1:1,17:18:42.06:687,42,0	0/0:22,0:22:63.22:0,63,1614	0/0:28,0:28:78.27:0,78,1994	0/0:15,0:15:45.15:0,45,1147
chr10	108746511	.	T	TAA	6048.06	PASS	AB=0.598;AC=39;AF=0.696;AN=56;BaseQRankSum=0.924;DP=563;FS=8.385;HRun=12;HaplotypeScore=83.3909;InbreedingCoeff=0.5166;MQ=70.37;MQ0=1;MQRankSum=-0.803;QD=13.41;ReadPosRankSum=1.199;VQSLOD=3.2776;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:33:49.62:599,50,0	0/0:8,0:8:17.98:0,18,167	0/0:14,0:11:17.71:0,18,143	0/0:14,0:15:17.98:0,18,185	0/1:10,1:33:19.46:143,0,19	1/1:1,0:17:27.45:95,27,0	0/1:6,0:17:22.07:62,0,22	1/1:10,18:32:59.06:650,59,0	1/1:3,0:21:14.17:100,14,0	0/0:29,0:31:59.74:0,60,590	0/0:20,0:20:4.42:0,4,328	0/1:3,0:17:7.29:40,0,7	0/1:6,0:22:33.67:53,0,34	1/1:2,1:11:20.58:104,21,0	1/1:4,0:24:33.80:124,34,0	0/0:23,0:23:54:0,54,500	1/1:3,21:23:45.15:631,45,0	1/1:1,10:11:18.03:231,18,0	1/1:8,13:23:44.06:521,44,0	1/1:3,22:25:62.97:735,63,0	1/1:3,5:9:9.03:126,9,0	0/1:7,0:16:24.77:25,0,37	1/1:3,1:16:23:112,23,0	1/1:1,0:7:7.49:26,7,0	1/1:8,0:22:6.19:65,6,0	1/1:11,19:31:16.22:702,16,0	1/1:6,15:23:11.58:413,12,0	1/1:1,15:17:36.12:491,36,0
chr10	108746973	.	G	GGGA	707.72	PASS	AB=0.966;AC=21;AF=0.375;AN=56;BaseQRankSum=4.017;DP=258;FS=0.000;HRun=0;HaplotypeScore=98.8999;InbreedingCoeff=-0.1656;MQ=43.58;MQ0=8;MQRankSum=-5.295;QD=4.24;ReadPosRankSum=3.006;VQSLOD=1.8077;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:11:17.97:83,0,18	0/0:1,0:1:3.01:0,3,53	0/0:18,0:4:11.73:0,12,109	0/0:8,0:4:8.21:0,8,41	0/1:24,0:24:62.64:63,0,218	0/1:18,0:17:61.95:130,0,62	0/0:12,0:10:8.99:0,9,77	0/0:9,0:2:0.47:0,0,1	0/1:11,1:11:41.26:41,0,162	0/0:10,0:9:24.04:0,24,386	0/0:9,0:9:21.07:0,21,339	0/1:4,1:5:48.60:60,0,49	0/1:11,0:10:2.72:3,0,161	1/1:4,0:3:3.01:32,3,0	0/0:9,0:7:1.27:0,1,82	0/0:2,0:2:6.02:0,6,101	0/1:8,0:8:39.83:40,0,50	0/0:3,0:2:3:0,3,25	0/1:6,0:3:10.27:26,0,10	0/1:7,0:7:41.69:91,0,42	0/1:6,0:5:24.10:28,0,24	0/1:11,2:11:30.90:62,0,31	0/1:10,0:9:34.66:35,0,37	0/0:8,1:9:9.02:0,9,93	0/1:10,0:10:4.43:4,0,58	1/1:11,0:10:1.49:44,1,0	1/1:7,0:5:8.11:73,8,0	1/1:1,0:1:3.01:45,3,0
chr10	108746981	.	AGGTAGTGGT	A	3155.34	PASS	AB=0.934;AC=32;AF=0.571;AN=56;BaseQRankSum=6.381;DP=204;FS=0.000;HRun=0;HaplotypeScore=89.7145;InbreedingCoeff=0.0034;MQ=43.62;MQ0=7;MQRankSum=-3.133;QD=19.72;ReadPosRankSum=3.729;VQSLOD=2.2865;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:8:24.56:190,0,25	0/0:1,0:1:3.01:0,3,73	0/0:15,0:3:3.19:0,3,163	0/0:10,0:5:3.95:0,4,54	0/1:16,0:16:4.89:154,0,5	1/1:15,2:15:36.10:625,36,0	1/1:9,0:8:8.96:103,9,0	1/1:4,0:1:3.01:42,3,0	0/1:7,0:6:2.94:240,0,3	0/0:8,0:7:0.01:0,0,251	0/0:8,0:8:14.85:0,15,191	0/1:6,0:6:14.58:125,0,15	0/1:7,0:6:4.90:153,0,5	1/1:3,1:3:1.82:5,2,0	0/1:8,1:7:28.75:265,0,29	0/0:2,0:2:5.99:0,6,48	0/1:6,0:6:29.72:141,0,30	0/1:2,0:1:0:0,0,0	0/1:4,0:2:10.08:59,0,10	1/1:7,0:7:9:113,9,0	1/1:4,0:3:3:37,3,0	1/1:10,1:9:20.80:254,21,0	0/1:8,1:8:8.43:118,0,8	0/1:2,3:5:11.79:12,0,20	1/1:9,0:8:21.54:385,22,0	0/1:5,1:6:27.78:161,0,28	1/1:3,1:3:8.98:87,9,0	1/1:1,0:1:3.01:43,3,0
chr10	108746982	.	GGT	G	150.07	PASS	AB=0.981;AC=17;AF=0.304;AN=56;BaseQRankSum=6.200;DP=199;FS=0.747;HRun=0;HaplotypeScore=84.0203;InbreedingCoeff=0.1283;MQ=43.89;MQ0=7;MQRankSum=-3.428;QD=1.35;ReadPosRankSum=4.360;VQSLOD=1.3740;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:8:10.85:0,11,62	0/0:1,0:1:3.01:0,3,38	0/0:15,0:3:7.27:0,7,122	0/1:9,0:5:1.18:1,0,44	0/1:14,1:15:11.75:12,0,39	0/1:14,2:15:3.14:93,0,3	0/1:8,0:7:5.11:7,0,5	0/0:3,0:1:2.98:0,3,21	0/1:7,0:6:3.62:4,0,36	0/0:8,0:7:18.01:0,18,198	0/0:8,0:8:17.72:0,18,200	0/1:6,0:6:2.16:2,0,47	1/1:6,1:6:10.21:43,10,0	0/0:4,0:3:3.01:0,3,31	0/1:9,0:7:11.61:34,0,12	0/0:2,0:2:6.02:0,6,77	0/0:6,0:6:3.97:0,4,60	0/0:2,0:1:3:0,3,29	0/0:4,0:2:0.48:0,0,15	0/0:7,0:7:8.29:0,8,37	0/0:3,0:2:5.62:0,6,27	0/1:11,0:9:15.48:15,0,18	0/0:9,0:8:5.12:0,5,63	0/0:5,0:5:0.68:0,1,21	1/1:9,0:8:15.07:52,15,0	0/1:7,0:6:0.04:0,0,61	1/1:5,0:3:7.09:24,7,0	1/1:1,0:1:1.25:3,1,0
chr10	108746983	.	GT	G	827.47	PASS	AB=0.728;AC=32;AF=0.571;AN=56;BaseQRankSum=4.340;DP=166;FS=7.150;HRun=1;HaplotypeScore=70.8496;InbreedingCoeff=0.2639;MQ=45.10;MQ0=7;MQRankSum=-2.929;QD=6.57;ReadPosRankSum=0.731;VQSLOD=0.4141;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:3,4:5:7.92:27,0,8	0/0:1,0:1:2.98:0,3,22	0/0:15,0:3:8.52:0,9,104	0/1:9,0:5:5.16:5,0,51	1/1:4,7:11:16.67:88,17,0	1/1:8,8:15:13.45:189,13,0	0/1:3,4:6:4.64:19,0,5	0/0:3,0:1:2.97:0,3,20	1/1:4,2:5:9.02:41,9,0	0/0:7,0:6:17.69:0,18,117	0/0:6,0:6:15.16:0,15,92	0/1:3,1:4:5.10:5,0,29	1/1:2,3:4:11.55:71,12,0	0/0:4,0:3:3:0,3,26	1/1:3,3:4:11.61:66,12,0	0/0:2,0:2:5.93:0,6,44	0/1:3,2:5:11.58:12,0,14	0/0:1,1:1:2.99:0,3,23	1/1:2,1:1:1.55:4,2,0	1/1:1,3:4:8.88:57,9,0	0/1:1,2:2:12.94:13,0,13	1/1:7,3:8:12.96:104,13,0	0/1:3,4:6:12.81:40,0,13	1/1:4,0:4:1.55:4,2,0	1/1:1,7:7:20.28:141,20,0	0/1:3,1:3:18.98:26,0,19	1/1:2,3:3:8.94:66,9,0	1/1:0,1:1:2.97:20,3,0
chr10	108746985	.	AGT	A	780.87	PASS	AB=0.743;AC=29;AF=0.518;AN=56;BaseQRankSum=3.174;DP=161;FS=12.145;HRun=0;HaplotypeScore=70.7551;InbreedingCoeff=0.2030;MQ=45.24;MQ0=6;MQRankSum=-1.160;QD=6.85;ReadPosRankSum=-0.861;VQSLOD=1.7962;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:4,3:5:7.51:8,0,17	0/0:1,0:1:3.01:0,3,31	0/0:15,0:3:7.27:0,7,119	0/1:9,0:5:43.48:43,0,48	1/1:3,7:10:15.03:80,15,0	1/1:10,8:16:9.59:162,10,0	0/1:3,3:6:12.68:24,0,13	0/0:3,0:1:2.98:0,3,21	1/1:3,2:4:0.39:29,0,0	0/0:7,0:6:17.99:0,18,169	0/0:6,0:6:8.98:0,9,92	0/1:3,1:4:8.75:9,0,45	1/1:2,3:4:10.79:78,11,0	0/0:4,0:3:3:0,3,28	1/1:3,3:4:11.92:89,12,0	0/0:2,0:2:3.01:0,3,37	0/1:2,2:4:14.13:16,0,14	0/0:1,1:1:3:0,3,27	1/1:1,1:1:1.82:5,2,0	1/1:1,3:4:1.41:4,1,0	0/0:1,2:2:2.15:0,2,13	1/1:6,3:7:12.25:70,12,0	0/1:2,4:5:17.73:26,0,18	0/0:4,0:4:2.90:0,3,16	1/1:1,7:7:20.75:169,21,0	0/1:3,1:3:18.13:34,0,18	1/1:2,3:3:8.99:78,9,0	1/1:0,1:1:2.99:24,3,0
chr10	108746999	.	AGGTGGG	A	1971.39	PASS	AB=0.892;AC=40;AF=0.714;AN=56;BaseQRankSum=2.103;DP=209;FS=7.995;HRun=0;HaplotypeScore=80.7746;InbreedingCoeff=0.2802;MQ=41.10;MQ0=11;MQRankSum=-0.292;QD=11.14;ReadPosRankSum=0.155;VQSLOD=0.8786;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,1:6:12.02:149,12,0	0/1:3,0:3:24.13:24,0,43	0/0:14,0:3:7.46:0,7,32	0/1:12,0:6:1.01:14,0,1	1/1:9,5:14:14.92:141,15,0	1/1:9,7:14:9.89:412,10,0	0/1:6,1:6:9.54:15,0,10	0/1:4,5:8:0.92:67,0,1	1/1:5,1:5:11.88:105,12,0	0/1:7,0:6:3.04:3,0,273	0/0:7,0:7:6.02:0,6,152	0/1:4,1:4:1.46:58,0,1	1/1:5,1:5:7.26:69,7,0	0/0:3,1:3:2.84:0,3,14	1/1:6,2:7:14.08:227,14,0	0/0:2,0:2:3.01:0,3,89	1/1:5,2:7:13.21:139,13,0	0/0:2,0:1:2.04:0,2,6	1/1:6,1:5:3.12:77,3,0	1/1:7,0:6:2.96:19,3,0	1/1:5,1:4:3.01:36,3,0	1/1:6,3:7:8.19:83,8,0	1/1:6,2:8:0.69:1,1,0	1/1:5,0:5:2.67:31,3,0	1/1:4,5:8:17.98:263,18,0	1/1:7,1:7:11.10:113,11,0	1/1:7,1:6:6.34:36,6,0	1/1:1,0:1:3.01:33,3,0
chr10	108747011	.	AGGAGGG	A	521.65	PASS	AB=0.965;AC=27;AF=0.482;AN=56;BaseQRankSum=1.633;DP=264;FS=1.817;HRun=0;HaplotypeScore=79.0924;InbreedingCoeff=0.0318;MQ=29.82;MQ0=41;MQRankSum=-1.640;QD=2.82;ReadPosRankSum=0.147;VQSLOD=1.2272;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:6:15.11:28,0,15	0/1:3,0:3:4.33:4,0,66	0/0:13,0:2:5.47:0,5,25	0/0:10,0:2:3.37:0,3,16	1/1:17,0:15:9.82:140,10,0	0/1:15,5:15:2.29:111,0,2	0/0:4,4:7:0.66:0,1,13	0/0:13,0:11:8.51:0,9,51	0/1:13,0:11:5.76:43,0,6	0/0:10,0:6:15.02:0,15,281	0/0:11,0:6:8.98:0,9,146	1/1:10,0:6:10.41:64,10,0	0/1:7,2:4:5.39:17,0,5	1/1:6,0:3:1.55:4,2,0	0/1:7,0:8:25.88:36,0,26	0/0:5,0:2:6.02:0,6,107	0/1:9,0:9:9.64:10,0,66	0/1:5,0:4:10.44:10,0,39	0/1:14,0:11:35.90:36,0,132	1/1:8,0:6:3.28:9,3,0	1/1:8,0:5:3.81:19,4,0	1/1:8,0:6:6.63:33,7,0	0/1:9,0:9:17.50:17,0,40	0/0:6,0:5:0.47:0,0,1	1/1:5,3:7:9.39:49,9,0	0/1:13,0:9:25.69:26,0,41	1/1:7,0:6:3.91:21,4,0	0/0:2,0:2:1.30:0,1,31
chr10	108747101	.	AAGAAGTAGT	A	9684.22	PASS	AB=0.935;AC=37;AF=0.661;AN=56;BaseQRankSum=3.712;DP=409;FS=5.006;HRun=0;HaplotypeScore=94.7794;InbreedingCoeff=0.3767;MQ=53.46;MQ0=35;MQRankSum=-1.397;QD=29.26;ReadPosRankSum=2.071;VQSLOD=3.5710;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:15:45.11:671,45,0	0/0:9,0:9:26.76:0,27,482	0/0:7,0:4:12.04:0,12,216	0/0:12,0:8:21.07:0,21,388	1/1:22,0:21:23.08:641,23,0	0/1:23,0:22:99:547,0,144	1/1:15,0:11:5.28:322,5,0	1/1:29,0:26:68.38:1022,68,0	0/1:19,0:16:15.23:449,0,15	0/0:24,0:19:54.18:0,54,1207	0/0:17,0:13:33.58:0,34,845	1/1:8,0:8:21.07:376,21,0	1/1:6,0:4:9.03:141,9,0	1/1:12,0:11:3.01:50,3,0	0/1:3,15:15:79.54:80,0,84	0/0:9,0:8:21.07:0,21,356	0/1:8,0:7:50.49:305,0,50	1/1:15,0:15:42.14:672,42,0	1/1:10,0:9:23.76:386,24,0	0/1:9,0:9:49.07:298,0,49	0/1:23,0:22:99:758,0,146	1/1:9,0:9:15.86:171,16,0	1/1:1,12:12:5.38:72,5,0	1/1:21,0:18:42.92:726,43,0	1/1:13,0:12:27.50:345,28,0	0/1:14,0:13:21.20:465,0,21	1/1:15,0:15:45.15:664,45,0	1/1:13,0:12:33.11:524,33,0
chr10	108747104	.	AAGTAGT	A	10417.20	PASS	AB=0.924;AC=38;AF=0.679;AN=56;BaseQRankSum=4.987;DP=409;FS=8.321;HRun=0;HaplotypeScore=76.5377;InbreedingCoeff=0.4626;MQ=58.52;MQ0=28;MQRankSum=-1.848;QD=31.47;ReadPosRankSum=2.015;VQSLOD=3.2230;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:16:48.07:690,48,0	0/0:9,0:9:26.76:0,27,457	0/0:9,0:6:18.03:0,18,289	0/0:13,0:9:24.08:0,24,428	1/1:22,0:21:45.10:701,45,0	0/1:24,0:23:19.67:600,0,20	1/1:15,0:11:30.10:436,30,0	1/1:4,27:29:77.88:1099,78,0	1/1:19,0:16:39.95:555,40,0	0/0:22,0:19:57.20:0,57,1156	0/0:18,0:14:36.12:0,36,766	1/1:7,0:7:21.07:349,21,0	1/1:4,0:3:9.03:141,9,0	1/1:1,13:13:3.01:69,3,0	0/1:18,0:15:61.66:62,0,65	0/0:7,0:7:21.07:0,21,336	0/1:10,0:9:26.51:387,0,27	1/1:14,0:14:42.14:672,42,0	1/1:1,9:10:27.04:407,27,0	0/1:9,0:9:27.63:298,0,28	0/1:23,0:22:61.37:805,0,61	1/1:0,8:8:17.99:206,18,0	1/1:12,0:12:6:73,6,0	1/1:21,0:18:54.12:826,54,0	1/1:13,0:12:30.01:387,30,0	0/1:2,11:13:20.88:466,0,21	1/1:15,0:15:45.15:664,45,0	1/1:12,0:12:33.11:524,33,0
chr10	108747545	.	TC	T	11191.99	PASS	AB=0.538;AC=43;AF=0.768;AN=56;BaseQRankSum=2.601;DP=535;FS=4.691;HRun=3;HaplotypeScore=73.3392;InbreedingCoeff=0.9216;MQ=73.51;MQ0=6;MQRankSum=-6.354;QD=29.77;ReadPosRankSum=4.821;VQSLOD=4.4834;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:32:84.15:1000,84,0	0/0:12,0:12:33.07:0,33,405	0/0:44,0:35:73.04:0,73,934	0/0:37,0:30:10.60:0,11,674	1/1:0,15:15:39:443,39,0	1/1:1,14:15:33.05:388,33,0	1/1:0,24:23:57.14:686,57,0	1/1:0,23:22:60.14:682,60,0	1/1:0,19:19:39.03:460,39,0	0/0:29,0:29:84.19:0,84,1100	0/0:17,0:17:39.11:0,39,516	1/1:0,11:11:33.10:405,33,0	1/1:0,7:7:21:240,21,0	1/1:1,11:12:26.97:283,27,0	1/1:0,12:12:36.07:427,36,0	0/0:19,0:19:56.96:0,57,696	1/1:0,33:32:93.17:1097,93,0	1/1:4,25:28:60.19:740,60,0	1/1:0,7:7:21.04:234,21,0	1/1:2,10:11:30.05:353,30,0	1/1:0,15:15:39.12:481,39,0	1/1:0,14:14:36.11:442,36,0	1/1:1,13:14:30.09:370,30,0	1/1:0,14:14:35.99:407,36,0	1/1:1,12:13:27.08:333,27,0	0/1:2,12:14:2.89:394,0,3	1/1:0,13:13:30.09:367,30,0	1/1:0,27:27:78.25:962,78,0
chr10	108747760	.	CT	C	1224.93	PASS	AB=0.984;AC=31;AF=0.554;AN=56;BaseQRankSum=-3.798;DP=535;FS=4.521;HRun=2;HaplotypeScore=79.2391;InbreedingCoeff=-0.2130;MQ=42.23;MQ0=51;MQRankSum=-7.367;QD=3.17;ReadPosRankSum=1.141;VQSLOD=0.2232;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:9:37.95:46,0,38	1/1:12,0:12:16.57:81,17,0	0/1:26,5:13:82.94:83,0,114	0/1:23,3:5:22.71:31,0,23	0/1:9,0:7:10.17:10,0,14	0/1:12,0:9:16.80:51,0,17	0/1:23,0:15:1.52:2,0,108	0/0:57,0:36:14.38:0,14,79	0/1:16,0:12:16.06:78,0,16	0/1:12,0:10:31.84:32,0,43	1/1:5,0:5:2.87:15,3,0	0/1:21,0:14:22.21:88,0,22	0/1:19,0:14:63.96:92,0,64	0/1:26,1:20:77.34:77,0,80	1/1:19,0:14:10.68:112,11,0	0/1:21,0:16:15.61:111,0,16	0/0:34,0:30:14.47:0,14,291	0/1:28,0:21:15.41:15,0,206	0/1:20,0:13:43.30:43,0,75	0/1:8,0:4:11.24:21,0,11	0/0:30,0:15:9.03:0,9,110	0/1:9,0:7:5.30:55,0,5	1/1:8,0:8:5.48:30,5,0	0/0:28,0:24:12.08:0,12,206	1/1:13,0:11:25.85:136,26,0	0/1:8,0:6:0.48:38,0,0	1/1:16,0:16:13.93:129,14,0	1/1:6,0:5:2.84:14,3,0
chr10	108748158	.	GACC	G	548.11	PASS	AB=0.974;AC=20;AF=0.357;AN=56;BaseQRankSum=4.219;DP=368;FS=8.676;HRun=0;HaplotypeScore=54.3499;InbreedingCoeff=0.1317;MQ=46.99;MQ0=14;MQRankSum=0.299;QD=2.65;ReadPosRankSum=3.473;VQSLOD=0.1469;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:5.91:0,6,224	0/0:3,0:3:9.03:0,9,153	0/0:14,0:4:6.01:0,6,97	0/0:10,0:2:6:0,6,76	0/1:7,0:5:18.30:30,0,18	0/1:21,1:17:33.47:123,0,33	0/1:17,0:11:3.14:3,0,92	0/0:14,0:12:26.96:0,27,234	1/1:13,0:11:0.32:79,0,0	0/0:10,0:11:27.01:0,27,331	0/0:5,0:5:9.03:0,9,201	1/1:11,1:6:17.67:126,18,0	0/1:12,0:8:15.17:15,0,31	0/1:19,0:12:23.49:86,0,23	1/1:16,0:10:11.49:63,11,0	0/0:10,0:10:27.06:0,27,415	0/0:26,0:26:52.96:0,53,365	0/1:25,1:23:1.83:2,0,230	0/1:14,0:9:2.48:2,0,169	0/0:3,0:2:5.97:0,6,45	0/0:22,0:23:46.84:0,47,316	1/1:10,1:8:5.81:34,6,0	1/1:5,0:3:8.73:53,9,0	0/1:13,0:7:17.19:40,0,17	0/1:10,1:7:34.74:35,0,47	0/0:11,0:11:28.31:0,28,179	0/1:8,1:8:23.12:23,0,63	0/0:4,0:4:5.87:0,6,79
chr10	108748968	.	AT	A	2857.71	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=7.703;DP=458;FS=4.826;HRun=12;HaplotypeScore=100.6197;InbreedingCoeff=0.9277;MQ=66.74;MQ0=1;MQRankSum=-1.875;QD=16.52;ReadPosRankSum=0.669;VQSLOD=4.1219;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:26:50.45:379,50,0	0/0:6,0:6:12.02:0,12,122	0/0:16,0:14:12.11:0,12,156	0/0:14,0:11:19.77:0,20,152	0/0:26,0:26:44.57:0,45,213	0/0:29,0:29:50.33:0,50,239	0/0:12,0:12:6.73:0,7,55	1/1:7,21:29:62.66:480,63,0	0/0:11,0:11:17.68:0,18,80	0/0:16,0:16:42.08:0,42,422	0/0:21,0:21:51.07:0,51,502	0/0:20,0:20:42.53:0,43,173	0/0:20,0:20:35.66:0,36,154	0/0:10,0:10:16.32:0,16,69	0/0:19,0:19:29.81:0,30,140	0/0:11,1:12:0.81:0,1,189	1/1:4,15:19:38.79:298,39,0	1/1:2,15:18:44.76:340,45,0	1/1:2,6:9:23.90:183,24,0	1/1:1,8:10:23.88:184,24,0	1/1:2,9:11:26.89:209,27,0	0/0:12,0:12:23.28:0,23,101	0/0:19,0:19:33.50:0,34,133	0/0:11,0:11:26.32:0,26,106	0/0:11,0:11:17.93:0,18,83	1/1:3,25:29:50.22:566,50,0	1/1:1,17:19:47.80:368,48,0	1/1:0,3:3:8.96:68,9,0
chr10	108748978	.	T	TA	8096.93	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=2.314;DP=470;FS=12.809;HRun=0;HaplotypeScore=86.1561;InbreedingCoeff=0.9791;MQ=63.59;MQ0=1;MQRankSum=-1.288;QD=20.81;ReadPosRankSum=3.300;VQSLOD=5.9440;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:48.33:266,48,0	0/0:7,0:7:21.01:0,21,238	0/0:13,0:11:26.79:0,27,266	0/0:12,0:9:17.44:0,17,208	1/1:0,26:26:72.08:878,72,0	1/1:5,21:27:52.42:729,52,0	1/1:0,13:13:20.99:229,21,0	1/1:28,0:28:77.51:422,78,0	1/1:0,10:10:27.08:348,27,0	0/0:18,0:18:51.14:0,51,653	0/0:19,0:19:51.15:0,51,665	1/1:0,21:21:48.16:627,48,0	1/1:0,19:19:48.15:624,48,0	1/1:0,10:11:18.05:224,18,0	1/1:0,23:23:38.99:464,39,0	0/0:12,0:12:36.04:0,36,415	1/1:22,0:22:50.21:265,50,0	1/1:19,0:19:53.85:291,54,0	1/1:16,0:14:34.49:218,34,0	1/1:14,0:14:33.77:196,34,0	1/1:9,0:9:24.73:115,25,0	1/1:0,11:11:29.84:328,30,0	1/1:1,14:16:42.06:534,42,0	1/1:1,12:13:30.10:398,30,0	1/1:0,13:13:27.08:347,27,0	1/1:29,0:29:33:332,33,0	1/1:19,0:19:46.99:228,47,0	1/1:3,0:3:8.01:34,8,0
chr10	108749143	.	TG	T	8183.18	PASS	AB=0.609;AC=32;AF=0.571;AN=56;BaseQRankSum=10.697;DP=639;FS=16.865;HRun=3;HaplotypeScore=101.5230;InbreedingCoeff=0.2094;MQ=33.28;MQ0=79;MQRankSum=-7.356;QD=16.94;ReadPosRankSum=1.955;VQSLOD=3.6938;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:14,15:24:26.99:335,0,27	0/0:14,0:13:36.12:0,36,514	0/0:34,0:1:3.01:0,3,32	0/0:34,0:2:5.04:0,5,38	1/1:3,14:14:24.08:296,24,0	1/1:3,24:26:42.13:520,42,0	1/1:4,16:17:36.11:443,36,0	1/1:5,33:32:87.27:1078,87,0	1/1:2,14:16:30.09:369,30,0	0/0:27,0:22:60.12:0,60,817	0/0:18,0:16:39.13:0,39,548	0/1:6,17:19:47.03:369,0,47	0/1:6,14:17:53.08:300,0,53	0/1:8,21:26:17.88:437,0,18	1/1:4,18:19:33.09:396,33,0	0/0:22,0:20:60.12:0,60,817	0/1:9,17:24:99:295,0,111	0/1:9,10:18:99:290,0,174	0/1:11,13:14:3.80:407,0,4	1/1:10,22:28:36.11:444,36,0	1/1:11,9:16:2.14:238,2,0	1/1:3,5:6:12.04:148,12,0	0/1:6,16:18:12.95:304,0,13	0/1:10,13:18:18.50:236,0,18	0/1:5,17:17:9.98:338,0,10	1/1:6,17:18:51.16:629,51,0	1/1:8,15:18:9.15:311,9,0	0/0:6,1:6:9.03:0,9,130
chr10	108749153	.	G	GA	8881.83	PASS	AB=0.671;AC=29;AF=0.558;AN=52;BaseQRankSum=11.047;DP=693;FS=2.347;HRun=3;HaplotypeScore=120.9898;InbreedingCoeff=-0.1615;MQ=29.99;MQ0=82;MQRankSum=-8.295;QD=16.57;ReadPosRankSum=2.408;VQSLOD=4.6592;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,11:26:99:197,0,138	0/0:15,0:14:36.11:0,36,446	./.	./.	0/1:8,15:18:6.74:307,0,7	1/1:7,22:28:7.53:492,8,0	1/1:11,15:21:45.03:567,45,0	1/1:11,26:32:84.27:1190,84,0	1/1:2,14:16:30.02:385,30,0	0/0:30,0:25:72.23:0,72,891	0/0:20,0:18:45.14:0,45,554	0/1:9,16:21:99:398,0,101	0/1:10,11:18:99:292,0,144	0/1:11,20:28:99:462,0,132	1/1:5,20:22:7.57:525,8,0	0/0:25,0:22:60.19:0,60,740	0/1:15,12:25:99:257,0,128	0/1:11,11:21:99:392,0,171	1/1:13,13:16:4.95:505,5,0	0/1:13,20:29:70.15:343,0,70	0/1:17,6:19:65.16:65,0,157	0/1:7,5:10:12.81:196,0,13	0/1:9,15:20:47.65:530,0,48	0/1:14,7:16:46.72:247,0,47	0/1:8,15:17:1.17:401,0,1	1/1:7,20:21:26.06:809,26,0	0/1:11,14:19:40.24:298,0,40	0/1:6,3:8:23.95:24,0,100
chr10	108749691	.	CAGTGAGTCGT	C	5531.44	PASS	AC=40;AF=0.769;AN=52;BaseQRankSum=4.907;DP=143;FS=85.831;HRun=0;HaplotypeScore=46.7205;InbreedingCoeff=0.6796;MQ=85.27;MQ0=0;MQRankSum=-7.064;QD=68.29;ReadPosRankSum=-1.656;VQSLOD=1.2308;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:15.05:513,15,0	0/0:6,0:6:15.05:0,15,720	0/0:19,0:7:15.56:0,16,516	0/0:13,0:8:17.11:0,17,701	./.	1/1:0,4:4:6.02:205,6,0	1/1:0,11:11:22.32:592,22,0	1/1:0,5:5:15.04:319,15,0	1/1:0,2:2:6.02:205,6,0	0/0:10,0:10:17.99:0,18,619	0/0:3,0:3:9.03:0,9,344	1/1:2,3:5:12.04:358,12,0	1/1:0,1:1:3.01:103,3,0	1/1:0,7:7:17.93:527,18,0	1/1:0,3:3:9.03:307,9,0	0/0:10,0:10:30.10:0,30,1308	1/1:0,4:4:8.99:225,9,0	1/1:0,5:5:12.04:384,12,0	1/1:0,2:2:3.01:103,3,0	1/1:1,2:3:3.01:102,3,0	1/1:3,0:3:1.84:22,2,0	1/1:0,2:2:6.02:205,6,0	1/1:0,1:1:3.01:90,3,0	1/1:0,6:6:12.51:411,13,0	1/1:0,2:2:4.26:106,4,0	1/1:1,3:4:9.03:244,9,0	1/1:0,6:6:15.05:512,15,0	./.
chr10	108750480	.	TG	T	9217.41	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=8.549;DP=619;FS=8.484;HRun=1;HaplotypeScore=118.3317;InbreedingCoeff=0.9735;MQ=65.16;MQ0=4;MQRankSum=-2.308;QD=19.65;ReadPosRankSum=-5.537;VQSLOD=2.8288;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,6:32:86.04:679,86,0	0/0:5,0:5:14.99:0,15,143	0/0:34,0:13:16.52:0,17,140	0/0:35,2:24:6.77:0,7,218	1/1:26,6:32:81.44:668,81,0	1/1:13,5:17:37.63:323,38,0	1/1:4,4:8:23.95:201,24,0	1/1:37,10:47:99:827,108,0	1/1:17,5:22:59.72:472,60,0	0/0:29,0:29:81.08:0,81,898	0/0:20,0:20:59.53:0,60,681	1/1:11,0:11:28.43:205,28,0	1/1:7,2:8:20.03:162,20,0	1/1:16,0:16:41.36:325,41,0	1/1:11,6:17:48.04:452,48,0	0/0:25,0:25:62.74:0,63,717	1/1:20,7:25:62.63:513,63,0	1/1:19,5:24:52.42:425,52,0	1/1:23,5:27:62.95:502,63,0	1/1:20,5:23:61.39:476,61,0	1/1:9,2:10:24.32:190,24,0	1/1:15,4:19:44.30:350,44,0	1/1:17,9:26:68.40:628,68,0	1/1:18,1:17:40.44:324,40,0	1/1:12,5:16:43.89:332,44,0	1/1:20,3:23:33.51:416,34,0	1/1:19,4:22:61.46:475,61,0	1/1:13,2:14:35.54:272,36,0
chr10	108750482	.	TTTTG	T	7353.24	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=6.305;DP=605;FS=29.397;HRun=0;HaplotypeScore=152.0205;InbreedingCoeff=0.6960;MQ=64.47;MQ0=4;MQRankSum=-4.259;QD=16.02;ReadPosRankSum=-4.249;VQSLOD=2.2827;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:61.02:680,61,0	0/0:5,0:5:15.05:0,15,333	0/0:32,0:12:28.42:0,28,331	0/0:38,0:24:25.31:0,25,503	1/1:31,0:31:42.30:513,42,0	1/1:15,3:17:15.20:298,15,0	1/1:7,1:8:23.99:237,24,0	1/1:44,1:45:44.83:454,45,0	1/1:19,0:19:33.48:370,33,0	0/0:27,0:27:69.70:0,70,1536	0/0:19,0:19:57.11:0,57,1298	0/1:9,0:9:7.22:67,0,7	1/1:9,0:8:4.42:137,4,0	1/1:17,0:17:26.12:189,26,0	1/1:17,0:17:45.94:532,46,0	0/0:25,0:25:69.19:0,69,1596	1/1:27,0:25:28.28:427,28,0	1/1:24,0:24:35.73:357,36,0	0/1:29,0:28:22.50:271,0,22	1/1:22,3:23:40.57:355,41,0	1/1:11,0:10:13.30:95,13,0	1/1:18,0:18:37.49:415,37,0	1/1:22,3:25:39.96:533,40,0	1/1:17,0:15:30.17:230,30,0	1/1:17,0:16:7.57:305,8,0	0/1:21,0:21:31.27:273,0,31	1/1:22,0:21:44.09:398,44,0	1/1:18,0:17:18.32:218,18,0
chr10	108750483	.	TTTG	T	7297.36	PASS	AB=0.974;AC=41;AF=0.732;AN=56;BaseQRankSum=7.933;DP=607;FS=27.567;HRun=0;HaplotypeScore=141.9263;InbreedingCoeff=0.7301;MQ=65.27;MQ0=4;MQRankSum=-3.980;QD=15.90;ReadPosRankSum=-3.204;VQSLOD=2.6731;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,5:32:65.87:561,66,0	0/0:5,0:5:15.05:0,15,303	0/0:32,0:12:10.23:0,10,355	0/0:39,0:25:26.73:0,27,568	1/1:26,4:30:46.54:447,47,0	1/1:16,2:17:13.04:241,13,0	1/1:6,2:8:23.99:239,24,0	1/1:39,5:44:71.07:535,71,0	1/1:14,5:19:30.38:331,30,0	0/0:27,0:27:75.23:0,75,1471	0/0:19,0:19:57.18:0,57,1161	0/1:9,0:9:1.93:102,0,2	1/1:8,1:8:18.48:159,18,0	1/1:17,0:17:35.37:289,35,0	1/1:12,6:18:48.94:459,49,0	0/0:26,0:26:71.88:0,72,1399	1/1:23,4:25:30.01:391,30,0	1/1:21,3:24:37.61:335,38,0	0/1:28,1:28:20.14:366,0,20	1/1:24,1:23:45.06:376,45,0	1/1:9,2:10:15.76:123,16,0	1/1:14,4:18:37.47:318,37,0	1/1:20,5:25:41.25:512,41,0	1/1:17,0:15:34.13:264,34,0	1/1:13,4:16:9.55:247,10,0	0/1:21,1:22:32.04:316,0,32	1/1:19,3:21:49.08:415,49,0	1/1:17,1:17:19.41:271,19,0
chr10	108750484	.	TTG	T	7456.18	PASS	AB=0.942;AC=41;AF=0.732;AN=56;BaseQRankSum=8.088;DP=601;FS=26.902;HRun=0;HaplotypeScore=128.2218;InbreedingCoeff=0.7257;MQ=65.79;MQ0=4;MQRankSum=-3.594;QD=16.42;ReadPosRankSum=-3.321;VQSLOD=2.1233;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,1:32:70.01:590,70,0	0/0:5,0:5:15.05:0,15,261	0/0:32,0:12:12.01:0,12,302	0/0:37,0:24:38.08:0,38,496	1/1:29,0:29:42.12:469,42,0	1/1:17,0:16:9.06:223,9,0	1/1:7,1:8:23.95:201,24,0	1/1:41,3:44:82.30:629,82,0	1/1:18,0:18:28.63:325,29,0	0/0:28,0:28:77.91:0,78,1278	0/0:19,0:19:57.14:0,57,949	0/1:9,0:9:5.83:105,0,6	1/1:8,1:8:18.45:152,18,0	1/1:17,0:17:33.80:271,34,0	1/1:20,0:20:57.06:536,57,0	0/0:26,0:26:71.87:0,72,1159	1/1:23,2:24:28.59:379,29,0	1/1:21,2:23:40.24:343,40,0	0/1:27,3:29:8.13:430,0,8	1/1:25,0:23:49.95:402,50,0	1/1:10,0:9:19.13:141,19,0	1/1:18,0:18:36.27:282,36,0	1/1:24,0:24:39.88:507,40,0	1/1:16,1:16:34.68:279,35,0	1/1:16,1:16:10.50:260,10,0	0/1:20,2:22:21.82:309,0,22	1/1:21,1:21:45.34:381,45,0	1/1:17,1:17:17.36:242,17,0
chr10	108750485	.	TG	T	7488.48	PASS	AB=0.872;AC=41;AF=0.732;AN=56;BaseQRankSum=7.959;DP=587;FS=23.507;HRun=1;HaplotypeScore=114.8479;InbreedingCoeff=0.7523;MQ=67.13;MQ0=4;MQRankSum=-3.587;QD=17.02;ReadPosRankSum=-3.336;VQSLOD=3.0986;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:72.02:566,72,0	0/0:5,0:5:15.05:0,15,218	0/0:34,0:14:31.73:0,32,273	0/0:34,1:23:37.56:0,38,349	1/1:26,1:27:47.11:428,47,0	1/1:15,0:14:17.77:223,18,0	1/1:8,0:8:23.88:182,24,0	1/1:44,0:44:91.29:708,91,0	1/1:18,0:18:30.32:323,30,0	0/0:28,0:28:80.88:0,81,1066	0/0:20,0:20:60.12:0,60,794	0/1:9,0:9:9.16:105,0,9	1/1:8,0:8:18.84:147,19,0	1/1:19,0:19:45.76:373,46,0	1/1:20,0:20:57.01:511,57,0	0/0:25,0:25:71.18:0,71,901	1/1:26,0:25:27.29:401,27,0	1/1:22,0:22:45.88:355,46,0	0/1:11,18:28:25.18:425,0,25	1/1:21,1:20:49.25:369,49,0	1/1:9,0:8:19.91:142,20,0	1/1:17,0:17:35.32:272,35,0	1/1:24,0:24:32.21:494,32,0	1/1:16,0:15:33.14:263,33,0	1/1:16,0:16:16.91:263,17,0	0/1:20,0:20:2.83:319,0,3	1/1:22,0:21:49.08:386,49,0	1/1:18,0:17:15.02:234,15,0
chr10	108751315	.	AGT	A	4323.28	PASS	AB=0.781;AC=20;AF=0.357;AN=56;BaseQRankSum=0.884;DP=809;FS=10.615;HRun=0;HaplotypeScore=163.7462;InbreedingCoeff=0.5401;MQ=57.32;MQ0=14;MQRankSum=6.304;QD=13.72;ReadPosRankSum=2.536;VQSLOD=4.4105;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,22:38:19.35:614,19,0	0/1:13,1:14:13.26:13,0,255	0/0:37,0:16:12.50:0,12,151	0/0:51,0:22:17.20:0,17,169	0/0:30,0:35:2.94:0,3,19	0/0:19,0:27:12:0,12,105	0/0:34,0:40:11.99:0,12,105	1/1:15,10:29:41.41:377,41,0	0/0:17,0:23:20.98:0,21,179	0/1:23,4:27:92.03:92,0,444	0/0:23,1:24:7.80:0,8,538	0/0:25,0:31:18:0,18,165	0/0:21,0:24:14.97:0,15,141	0/0:21,0:21:6:0,6,52	0/0:27,0:39:33:0,33,304	0/0:35,3:38:9.57:0,10,1000	1/1:6,18:26:8.09:494,8,0	1/1:6,6:11:15.04:171,15,0	0/1:15,6:22:62.96:204,0,63	1/1:12,14:28:41.78:439,42,0	0/1:12,31:44:6.37:793,0,6	0/0:26,0:31:9.01:0,9,96	0/0:19,0:21:3:0,3,26	0/0:22,0:21:3.01:0,3,44	0/0:18,0:26:14.99:0,15,129	1/1:13,17:30:47.97:527,48,0	1/1:16,17:34:4.64:482,5,0	1/1:3,5:9:11.87:117,12,0
chr10	108751892	.	GT	G	4994.92	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=5.682;DP=580;FS=3.007;HRun=9;HaplotypeScore=187.5377;InbreedingCoeff=0.9036;MQ=54.54;MQ0=10;MQRankSum=-8.483;QD=19.98;ReadPosRankSum=0.579;VQSLOD=2.9397;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:40.28:0,40,414	0/0:6,0:6:18.05:0,18,208	0/0:37,0:12:6.01:0,6,65	0/1:37,0:10:7.47:7,0,97	1/1:5,27:31:75.02:676,75,0	1/1:7,15:22:51.01:465,51,0	1/1:4,18:22:57.03:518,57,0	0/0:37,0:37:90.61:0,91,958	1/1:2,17:19:51.03:464,51,0	0/0:27,0:28:53.77:0,54,814	0/0:29,0:29:68.37:0,68,869	1/1:4,10:14:36.02:328,36,0	1/1:1,13:14:39.02:354,39,0	1/1:1,7:8:24.01:219,24,0	1/1:3,17:20:54.03:493,54,0	0/0:15,0:16:42.06:0,42,459	0/0:19,1:19:8.33:0,8,453	0/0:8,0:8:21.05:0,21,227	0/0:26,0:24:53.75:0,54,560	0/0:27,0:28:71.91:0,72,745	0/0:5,0:4:8.61:0,9,77	1/1:0,13:13:39.02:354,39,0	1/1:2,20:22:60.02:544,60,0	1/1:3,9:12:24:215,24,0	1/1:1,14:14:39.02:356,39,0	0/0:34,0:34:90.24:0,90,1005	0/0:29,0:28:59.91:0,60,455	0/0:7,0:7:21.04:0,21,228
chr10	108751913	.	T	TG	14984.52	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=9.476;DP=573;FS=8.219;HRun=0;HaplotypeScore=173.5637;InbreedingCoeff=0.8716;MQ=37.94;MQ0=10;MQRankSum=-8.580;QD=31.15;ReadPosRankSum=-0.564;VQSLOD=3.3505;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,12:25:47.72:634,48,0	0/0:8,0:7:21.06:0,21,280	0/0:18,0:3:6.48:0,6,39	0/1:26,0:4:9.50:9,0,42	1/1:4,26:28:69.04:950,69,0	1/1:2,17:19:56.91:735,57,0	1/1:3,19:22:63.06:858,63,0	1/1:5,17:30:80.17:954,80,0	1/1:2,15:17:51.14:714,51,0	0/0:23,0:23:68.96:0,69,915	0/0:26,0:26:78.24:0,78,1042	1/1:1,15:15:45.15:656,45,0	1/1:6,15:21:41.44:711,41,0	1/1:2,7:9:27.04:364,27,0	1/1:2,13:15:39.05:545,39,0	0/0:17,0:17:49.97:0,50,654	1/1:8,11:20:25.89:560,26,0	1/1:2,4:10:23.65:248,24,0	1/1:7,16:29:80.08:855,80,0	1/1:3,19:28:77.85:973,78,0	1/1:2,2:7:17.28:148,17,0	1/1:1,15:16:45.08:632,45,0	1/1:3,22:24:69.13:950,69,0	1/1:6,11:17:23.10:435,23,0	1/1:3,14:16:48.13:670,48,0	1/1:4,27:32:92.85:1219,93,0	1/1:6,16:31:31.69:874,32,0	1/1:2,6:8:21.05:290,21,0
chr10	108751928	.	GT	G	2752.51	PASS	AB=0.841;AC=41;AF=0.732;AN=56;BaseQRankSum=-0.653;DP=554;FS=0.520;HRun=15;HaplotypeScore=206.0862;InbreedingCoeff=0.5687;MQ=40.31;MQ0=10;MQRankSum=-5.072;QD=6.37;ReadPosRankSum=-2.515;VQSLOD=-0.2167;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,7:23:9.63:112,10,0	0/0:9,0:8:11.99:0,12,103	0/0:21,0:5:1.47:0,1,4	0/0:23,0:3:2.96:0,3,19	1/1:6,21:25:23.22:153,23,0	1/1:2,19:21:38.12:249,38,0	1/1:6,11:17:17.25:115,17,0	1/1:19,18:30:47.77:305,48,0	1/1:8,8:16:17.33:115,17,0	0/0:24,1:25:19.51:0,20,263	0/0:21,0:21:15.97:0,16,342	1/1:3,12:14:29.36:191,29,0	1/1:2,18:20:44.22:287,44,0	1/1:1,9:10:23.57:153,24,0	1/1:3,10:13:23.51:153,24,0	0/0:20,1:23:21.06:0,21,272	1/1:13,11:23:6.04:110,6,0	0/1:7,3:10:3.54:44,0,4	0/1:24,5:28:1.66:88,0,2	1/1:20,6:26:6.15:94,6,0	1/1:4,3:7:7.98:42,8,0	1/1:2,17:19:23.19:153,23,0	1/1:4,19:22:26:168,26,0	1/1:5,11:16:6.77:69,7,0	1/1:2,13:14:20.26:134,20,0	0/1:24,3:26:11.29:39,0,11	1/1:21,10:31:2.29:131,2,0	1/1:5,1:6:0.58:15,1,0
chr10	108751932	.	T	TG	4432.13	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=14.108;DP=559;FS=19.697;HRun=0;HaplotypeScore=201.9448;InbreedingCoeff=0.9034;MQ=42.62;MQ0=8;MQRankSum=-11.178;QD=10.00;ReadPosRankSum=7.700;VQSLOD=3.1607;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,4:25:30.95:263,31,0	0/0:8,0:8:24.03:0,24,257	0/0:22,0:5:8.02:0,8,57	0/0:20,0:4:8.62:0,9,54	1/1:29,0:28:16.10:163,16,0	1/1:22,0:22:37.95:196,38,0	1/1:16,0:16:28.47:164,28,0	1/1:38,0:31:28.10:237,28,0	1/1:18,0:18:12.27:142,12,0	0/0:22,0:22:64.15:0,64,621	0/0:22,0:22:64.61:0,65,729	1/1:17,0:16:9.86:99,10,0	1/1:21,0:21:25.22:123,25,0	1/1:13,0:13:4.10:48,4,0	1/1:12,0:12:23.04:93,23,0	0/0:22,0:22:53.91:0,54,525	1/1:18,6:23:46.81:256,47,0	1/1:7,3:10:14.66:97,15,0	1/1:19,10:28:38.68:357,39,0	1/1:18,10:28:63.10:430,63,0	1/1:6,1:7:16.43:95,16,0	1/1:18,0:18:40.82:193,41,0	1/1:24,0:23:36.27:225,36,0	1/1:17,0:17:8.80:73,9,0	1/1:15,0:14:32.89:158,33,0	1/1:18,7:24:66.61:428,67,0	1/1:20,10:30:84.12:503,84,0	1/1:3,2:5:14.51:90,15,0
chr10	108751939	.	T	TTGTTTTG	10214.24	PASS	AB=0.978;AC=31;AF=0.554;AN=56;BaseQRankSum=-5.161;DP=548;FS=1.164;HRun=0;HaplotypeScore=242.1128;InbreedingCoeff=0.0905;MQ=45.09;MQ0=6;MQRankSum=-2.701;QD=23.01;ReadPosRankSum=6.267;VQSLOD=4.2051;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,1:24:40.98:672,41,0	0/0:7,0:7:18.03:0,18,298	0/0:18,0:5:10.46:0,10,85	0/0:17,0:4:8.56:0,9,90	0/1:29,0:29:62.13:368,0,62	0/1:22,0:22:58.58:177,0,59	0/1:19,0:19:49.20:158,0,49	1/1:39,0:32:71.33:781,71,0	0/1:16,0:16:40.48:224,0,40	0/0:21,0:21:51.94:0,52,694	0/0:23,0:23:67.23:0,67,1147	0/1:19,0:18:25.12:204,0,25	0/1:20,0:20:24.79:151,0,25	0/1:13,0:13:14.45:191,0,14	0/1:13,0:13:27.11:50,0,27	0/0:18,0:18:47.75:0,48,645	1/1:19,5:23:53.87:925,54,0	1/1:9,1:12:17.77:281,18,0	1/1:16,6:25:51.33:1143,51,0	1/1:17,6:27:56.90:1300,57,0	1/1:8,0:9:17.91:300,18,0	0/1:20,0:20:94.51:106,0,95	0/1:21,0:20:80.80:142,0,81	0/1:17,0:17:29.50:115,0,29	0/1:15,0:14:5.05:5,0,87	1/1:17,6:24:65.72:1362,66,0	1/1:19,7:29:17.35:1404,17,0	0/1:3,2:5:0.95:157,0,1
chr10	108752757	.	G	GCGAA	16598.19	PASS	AB=0.526;AC=43;AF=0.768;AN=56;BaseQRankSum=-3.476;DP=323;FS=0.000;HRun=0;HaplotypeScore=48.7541;InbreedingCoeff=0.8089;MQ=46.68;MQ0=5;MQRankSum=-4.689;QD=70.03;ReadPosRankSum=1.682;VQSLOD=6.8625;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:21:54.19:1525,54,0	0/0:8,0:8:21.07:0,21,440	0/0:25,0:8:21.07:0,21,431	0/0:17,0:12:33.10:0,33,618	1/1:0,7:7:18.06:507,18,0	1/1:2,12:14:39.05:993,39,0	1/1:0,6:6:15.05:433,15,0	1/1:3,11:17:48.15:1245,48,0	1/1:0,12:12:33.11:951,33,0	0/0:18,0:18:54.18:0,54,1096	0/0:4,0:4:12.04:0,12,252	1/1:3,9:12:30.02:734,30,0	1/1:1,4:5:12.04:343,12,0	1/1:0,7:7:21.07:607,21,0	1/1:1,18:20:57.15:1579,57,0	0/0:13,0:13:39.13:0,39,804	1/1:1,14:15:45.15:1261,45,0	1/1:1,11:13:30.10:868,30,0	1/1:5,8:13:39.13:964,39,0	1/1:1,3:4:12:280,12,0	1/1:1,2:4:6.02:174,6,0	1/1:0,2:2:3.01:87,3,0	1/1:0,3:4:6.02:154,6,0	1/1:1,9:10:24.08:693,24,0	1/1:2,13:15:30.02:732,30,0	0/1:1,8:10:35.86:605,0,36	1/1:2,12:16:42.14:1212,42,0	1/1:1,7:9:24.08:652,24,0
chr10	108752800	.	CT	C	2526.59	PASS	AB=0.760;AC=21;AF=0.375;AN=56;BaseQRankSum=2.557;DP=373;FS=4.733;HRun=11;HaplotypeScore=73.1129;InbreedingCoeff=0.6219;MQ=63.23;MQ0=3;MQRankSum=-2.628;QD=14.19;ReadPosRankSum=0.340;VQSLOD=4.0181;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,17:28:61.67:485,62,0	0/0:4,0:4:6.02:0,6,64	0/0:17,0:11:20.04:0,20,150	0/0:20,0:17:31.22:0,31,252	0/0:10,0:10:27.07:0,27,288	0/1:13,2:15:13.22:13,0,272	0/0:7,0:7:15.04:0,15,159	1/1:9,14:23:41.92:345,42,0	0/0:8,0:8:21:0,21,211	0/0:23,0:23:52.68:0,53,541	0/1:7,1:8:5.05:5,0,138	0/0:12,0:12:29.96:0,30,309	0/0:7,0:7:18.05:0,18,192	0/0:10,0:10:21.01:0,21,211	0/0:17,1:18:26.41:0,26,463	0/0:16,0:16:42.09:0,42,439	1/1:1,18:19:44.93:368,45,0	0/1:6,10:15:25.03:229,0,25	1/1:3,13:16:38.91:317,39,0	1/1:1,7:8:23.01:178,23,0	1/1:0,2:2:5.99:49,6,0	0/0:2,0:2:0:0,0,0	0/1:4,1:5:9.60:10,0,113	0/0:18,0:18:45:0,45,451	0/0:20,1:20:23.49:0,23,455	0/1:3,8:11:2.04:192,0,2	1/1:3,12:15:41.91:338,42,0	1/1:6,5:11:23.95:197,24,0
chr10	108752997	.	T	TTTTG	3672.13	PASS	AB=0.667;AC=13;AF=0.232;AN=56;BaseQRankSum=-7.206;DP=438;FS=2.610;HRun=0;HaplotypeScore=70.9660;InbreedingCoeff=0.8520;MQ=61.62;MQ0=0;MQRankSum=-2.624;QD=34.00;ReadPosRankSum=-0.075;VQSLOD=3.0868;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:64.50:0,64,1034	0/0:12,0:12:27.06:0,27,392	0/0:18,0:16:11.37:0,11,159	0/0:17,0:16:17.91:0,18,189	0/0:10,0:10:21.06:0,21,321	0/0:18,0:18:45.15:0,45,734	0/0:26,0:26:54.14:0,54,818	1/1:18,2:21:11.97:218,12,0	0/0:16,0:16:27.09:0,27,439	0/0:16,0:16:39.13:0,39,637	0/0:10,0:10:27.04:0,27,411	0/0:12,0:12:21.04:0,21,315	0/0:7,0:7:18.06:0,18,294	0/0:5,0:4:6.02:0,6,98	0/0:12,0:12:27.09:0,27,441	0/0:10,0:10:24.06:0,24,367	0/0:37,0:37:81.26:0,81,1294	0/0:20,0:20:42.10:0,42,657	1/1:7,5:13:17.99:375,18,0	1/1:8,8:16:30.10:620,30,0	1/1:7,15:24:33.11:801,33,0	0/0:4,0:4:12.04:0,12,196	0/0:10,0:10:24.08:0,24,392	0/0:24,0:24:48.16:0,48,775	0/0:11,0:11:27.09:0,27,432	0/1:8,7:16:64.91:569,0,65	1/1:4,9:13:30.10:726,30,0	1/1:0,5:5:15.05:364,15,0
chr10	108753116	.	C	CTTTTT	6151.55	PASS	AB=0.882;AC=47;AF=0.839;AN=56;BaseQRankSum=-1.341;DP=460;FS=10.993;HRun=17;HaplotypeScore=115.5741;InbreedingCoeff=0.6587;MQ=61.48;MQ0=13;MQRankSum=-4.465;QD=16.27;ReadPosRankSum=-3.920;VQSLOD=-0.4593;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:32:49.77:689,50,0	0/0:3,0:3:5.18:0,5,39	0/0:27,0:10:11.85:0,12,142	0/0:29,0:13:4.51:0,5,101	1/1:9,1:17:23.44:290,23,0	1/1:9,9:19:12.01:175,12,0	1/1:17,0:17:28.89:338,29,0	1/1:16,0:15:5.66:28,6,0	1/1:11,0:11:12:154,12,0	0/0:17,0:21:11.22:0,11,156	1/1:4,0:4:2.98:22,3,0	1/1:23,0:21:22.89:357,23,0	1/1:10,0:9:9.03:133,9,0	1/1:10,0:9:10.85:181,11,0	1/1:16,0:15:19.85:289,20,0	0/1:12,0:15:10.25:10,0,64	1/1:24,0:24:26.75:388,27,0	1/1:16,6:22:22.99:355,23,0	1/1:16,0:13:22.88:369,23,0	1/1:14,0:13:24.03:310,24,0	1/1:11,0:10:18:217,18,0	1/1:9,0:9:13.29:215,13,0	1/1:9,0:8:15.05:276,15,0	1/1:16,0:15:12.15:165,12,0	1/1:17,0:16:33.11:565,33,0	1/1:15,0:19:14.51:184,15,0	1/1:22,0:22:23.30:272,23,0	1/1:7,0:6:9.03:169,9,0
chr10	108753951	.	C	CT	4941.55	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=-10.860;DP=516;FS=0.000;HRun=9;HaplotypeScore=55.7246;InbreedingCoeff=0.9039;MQ=76.85;MQ0=0;MQRankSum=0.985;QD=21.96;ReadPosRankSum=1.048;VQSLOD=5.4402;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:74.95:0,75,645	0/0:9,0:9:23.99:0,24,208	0/0:13,0:13:14.43:0,14,99	0/1:11,0:10:9.42:9,0,37	1/1:5,20:26:29.80:508,30,0	1/1:5,17:23:50.80:526,51,0	1/1:1,16:17:45.12:498,45,0	0/0:24,0:25:44.07:0,44,350	1/1:3,11:14:7.04:306,7,0	0/0:21,0:21:44.98:0,45,391	0/0:14,0:14:29.92:0,30,253	1/1:3,10:13:7:292,7,0	1/1:4,17:21:39.10:432,39,0	1/1:2,9:12:29.91:313,30,0	1/1:3,21:24:28.09:538,28,0	0/0:17,0:18:47.03:0,47,397	0/0:19,0:22:60.10:0,60,487	0/0:9,0:9:26.99:0,27,234	0/0:23,0:23:39.84:0,40,340	0/0:25,0:25:59.97:0,60,520	0/0:17,0:17:41.96:0,42,360	1/1:3,13:16:15.96:377,16,0	1/1:3,17:21:19.07:439,19,0	1/1:0,7:7:21.06:232,21,0	1/1:1,18:19:22.08:472,22,0	0/0:26,0:27:71.02:0,71,605	0/0:22,0:23:62.01:0,62,523	0/0:18,0:18:44.96:0,45,391
chr10	108754910	.	T	TAA	6320.97	PASS	AB=0.744;AC=34;AF=0.607;AN=56;BaseQRankSum=5.137;DP=612;FS=5.963;HRun=13;HaplotypeScore=112.8023;InbreedingCoeff=0.8297;MQ=69.25;MQ0=0;MQRankSum=-1.893;QD=14.80;ReadPosRankSum=-4.225;VQSLOD=2.7880;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:13,4:44:48.08:497,48,0	0/0:7,0:7:8.92:0,9,79	0/0:8,0:8:1.47:0,1,4	0/1:9,0:10:8.41:8,0,11	0/0:20,0:22:26:0,26,297	0/0:17,0:17:29.92:0,30,264	0/0:23,0:24:50.58:0,51,434	1/1:12,2:22:42.04:448,42,0	0/0:25,0:25:52.91:0,53,471	0/0:23,0:25:62.38:0,62,525	0/0:13,0:13:29.91:0,30,264	1/1:8,15:23:24.01:288,24,0	0/1:3,8:12:8.39:166,0,8	1/1:7,12:19:24:269,24,0	1/1:8,16:25:23.97:283,24,0	0/0:25,0:27:56.21:0,56,473	1/1:10,6:48:57.57:613,58,0	1/1:10,2:23:24.05:262,24,0	1/1:10,2:23:42.88:426,43,0	1/1:8,4:22:47.87:458,48,0	1/1:3,7:14:21.05:253,21,0	1/1:6,11:23:34.81:306,35,0	1/1:5,12:20:26.06:299,26,0	1/1:5,25:33:41.10:494,41,0	0/0:14,0:16:26.52:0,27,267	1/1:11,17:35:49.40:730,49,0	1/1:7,2:23:38.36:393,38,0	1/1:4,0:7:12.02:127,12,0
chr10	108755392	.	C	CT	2701.03	PASS	AB=0.911;AC=34;AF=0.630;AN=54;BaseQRankSum=-3.368;DP=316;FS=4.744;HRun=13;HaplotypeScore=37.6471;InbreedingCoeff=0.6719;MQ=58.88;MQ0=8;MQRankSum=-1.702;QD=11.59;ReadPosRankSum=-0.555;VQSLOD=2.5512;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,10:16:14.18:162,14,0	0/0:6,0:6:11.85:0,12,82	./.	0/0:6,0:5:5.18:0,5,28	0/1:10,0:10:1.40:1,0,85	0/0:20,0:19:29.72:0,30,206	0/1:4,0:4:0:0,0,0	1/1:14,19:32:32.90:481,33,0	0/0:8,0:8:20.77:0,21,141	0/0:14,0:14:17.65:0,18,118	0/0:14,0:13:29.73:0,30,205	1/1:1,4:5:12.01:111,12,0	1/1:6,1:6:3:28,3,0	0/1:4,5:9:28.66:44,0,29	1/1:3,14:17:39.04:362,39,0	0/0:4,0:5:8.93:0,9,62	1/1:5,13:20:12.60:232,13,0	1/1:4,11:15:24.36:224,24,0	1/1:13,8:18:26.71:223,27,0	1/1:3,9:13:20.15:209,20,0	1/1:4,0:4:2.99:23,3,0	0/1:1,0:1:0:0,0,0	1/1:1,2:3:3:28,3,0	1/1:0,5:5:3:28,3,0	0/0:5,0:5:14.88:0,15,103	1/1:6,6:12:18.44:159,18,0	1/1:7,20:26:33.31:439,33,0	1/1:2,5:7:16.89:132,17,0
chr10	108755931	.	GGA	G	154.20	PASS	AB=0.947;AC=22;AF=0.524;AN=42;BaseQRankSum=1.775;DP=409;FS=0.000;HRun=0;HaplotypeScore=56.7070;InbreedingCoeff=0.1769;MQ=63.62;MQ0=6;MQRankSum=-2.071;QD=0.96;ReadPosRankSum=-0.319;VQSLOD=1.2854;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:5.51:0,6,53	1/1:6,0:6:2.79:28,3,0	./.	./.	1/1:12,0:12:2.04:6,2,0	1/1:11,0:10:3.46:26,3,0	0/1:16,0:17:33.54:37,0,34	./.	1/1:9,3:12:3.01:32,3,0	0/1:14,0:14:10.68:11,0,61	1/1:11,0:11:3.01:32,3,0	./.	0/0:9,0:9:6.02:0,6,74	1/1:5,0:5:0.88:2,1,0	0/0:19,0:19:3.01:0,3,45	0/1:14,1:16:22.68:23,0,151	0/0:21,0:21:12.04:0,12,166	0/0:14,0:14:6:0,6,68	0/0:6,0:6:6.02:0,6,84	./.	1/1:18,0:18:2.99:23,3,0	1/1:9,0:9:3.89:34,4,0	./.	0/1:20,1:21:14.10:14,0,188	1/1:7,0:8:2.84:14,3,0	0/0:18,0:17:4.25:0,4,29	0/0:13,0:13:0:0,0,0	./.
chr10	108757987	.	C	CACCAAAACCAAA	3965.55	PASS	AB=0.859;AC=18;AF=0.333;AN=54;BaseQRankSum=-5.748;DP=489;FS=24.335;HRun=0;HaplotypeScore=156.6264;InbreedingCoeff=0.6506;MQ=61.49;MQ0=5;MQRankSum=0.507;QD=20.34;ReadPosRankSum=-4.022;VQSLOD=0.2674;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,5:25:6.02:338,6,0	0/0:7,0:7:18.06:0,18,511	0/0:28,0:22:2.72:0,3,23	0/1:17,0:14:12.24:12,0,59	0/0:18,0:18:26.67:0,27,766	0/0:17,0:17:27.09:0,27,752	0/0:17,0:17:24.07:0,24,556	1/1:31,0:31:18.05:380,18,0	0/0:18,0:18:30.10:0,30,919	0/0:25,0:25:47.67:0,48,1421	0/0:17,0:17:27.09:0,27,702	0/0:21,0:21:33.11:0,33,869	0/0:14,0:14:12.04:0,12,362	0/0:7,0:7:6.02:0,6,206	0/0:18,0:18:39.13:0,39,1234	0/0:15,0:15:24.08:0,24,778	1/1:15,0:24:24.06:862,24,0	1/1:8,2:13:3.01:175,3,0	1/1:18,3:23:15.04:542,15,0	1/1:2,0:8:3.01:146,3,0	1/1:13,0:13:3.01:81,3,0	0/0:16,0:16:33.11:0,33,823	0/0:10,0:10:17.98:0,18,510	0/0:24,0:24:5.22:0,5,736	0/0:17,0:17:36.12:0,36,1063	0/1:14,6:23:72.76:922,0,73	1/1:13,0:17:12.04:508,12,0	./.
chr10	108758516	.	C	CA	6583.58	PASS	AC=52;AF=1.000;AN=52;DP=267;FS=0.000;HRun=1;HaplotypeScore=39.4649;InbreedingCoeff=-0.0297;MQ=44.14;MQ0=12;QD=27.78;VQSLOD=4.4438;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,17:22:45.10:629,45,0	1/1:0,2:2:6.02:90,6,0	./.	./.	1/1:0,5:5:6.02:90,6,0	1/1:0,8:8:15.05:224,15,0	1/1:2,16:19:36:454,36,0	1/1:13,5:17:23.93:261,24,0	1/1:1,5:6:15.05:225,15,0	1/1:3,2:5:9:110,9,0	1/1:1,1:2:6.02:88,6,0	1/1:1,11:12:24.08:359,24,0	1/1:1,10:11:24.04:334,24,0	1/1:1,7:8:18.02:244,18,0	1/1:1,8:9:18.06:270,18,0	1/1:1,5:6:15.05:225,15,0	1/1:8,9:17:33.04:407,33,0	1/1:4,5:9:18.02:239,18,0	1/1:3,13:15:36.09:497,36,0	1/1:0,3:3:9.03:135,9,0	1/1:3,6:8:11.72:154,12,0	1/1:2,3:6:12.03:155,12,0	1/1:0,3:3:6.02:90,6,0	1/1:1,8:9:15.05:225,15,0	1/1:2,6:8:15.05:224,15,0	1/1:0,7:7:15.05:224,15,0	1/1:0,13:13:33.11:494,33,0	1/1:0,3:3:9.03:135,9,0
chr10	108758543	.	G	GA	628.29	PASS	AB=0.810;AC=13;AF=0.232;AN=56;BaseQRankSum=-1.933;DP=342;FS=15.695;HRun=14;HaplotypeScore=58.2206;InbreedingCoeff=-0.1243;MQ=65.25;MQ0=4;MQRankSum=-0.749;QD=4.03;ReadPosRankSum=-1.133;VQSLOD=-0.3493;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:14,18:35:39.33:302,0,39	0/1:4,1:5:17.50:18,0,30	0/0:23,0:10:16.53:0,17,87	0/0:14,1:4:0.37:0,0,1	0/0:8,0:8:5.75:0,6,38	0/0:10,0:10:8.75:0,9,58	0/1:14,3:18:71.91:72,0,84	0/0:29,1:30:3.17:0,3,135	0/1:7,1:8:11.92:12,0,46	0/1:5,2:7:17.50:17,0,29	0/0:4,0:4:11.82:0,12,77	0/0:15,0:16:21.86:0,22,127	0/0:15,0:15:14.45:0,14,94	0/1:8,1:10:9.57:10,0,65	0/1:11,2:13:26.09:26,0,107	0/0:10,0:11:19.24:0,19,111	1/1:7,7:15:24.13:182,24,0	0/1:5,9:14:7.27:66,0,7	0/1:14,2:18:38.47:38,0,113	0/0:7,0:7:14:0,14,94	0/0:5,0:6:12.94:0,13,69	0/1:4,2:7:17.10:19,0,17	0/0:4,0:4:5.90:0,6,38	0/1:5,1:6:17.52:18,0,30	0/0:7,0:8:10.82:0,11,64	0/0:7,0:7:8.81:0,9,57	0/0:15,1:16:3.13:0,3,146	0/0:3,0:3:8.87:0,9,58
chr10	108759150	.	CCA	C	439.28	PASS	AB=0.915;AC=15;AF=0.278;AN=54;BaseQRankSum=4.734;DP=511;FS=4.747;HRun=0;HaplotypeScore=84.7716;InbreedingCoeff=0.3832;MQ=62.37;MQ0=8;MQRankSum=-1.510;QD=2.83;ReadPosRankSum=-0.207;VQSLOD=1.1103;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,1:24:14.39:14,0,155	0/0:3,0:3:6.02:0,6,88	./.	0/0:31,0:16:0:0,0,0	0/0:13,0:17:3.01:0,3,41	0/0:12,0:12:9:0,9,90	0/0:20,0:25:8.93:0,9,95	0/0:19,0:19:2.97:0,3,20	0/0:18,0:27:17.99:0,18,167	0/0:12,0:11:6.01:0,6,72	0/0:7,0:7:3.01:0,3,44	0/1:13,5:17:35.40:56,0,35	1/1:7,5:11:9.02:97,9,0	1/1:15,4:19:6.01:65,6,0	1/1:12,3:16:6.32:47,6,0	0/0:19,0:20:6.92:0,7,249	0/0:32,3:34:9.69:0,10,496	0/0:25,3:28:6.66:0,7,425	0/0:14,0:14:6:0,6,51	0/0:10,0:10:3.01:0,3,43	0/0:33,0:33:5.97:0,6,88	1/1:10,2:12:6.02:65,6,0	1/1:13,5:18:6.01:65,6,0	1/1:15,9:25:15.04:162,15,0	0/0:12,0:12:5.76:0,6,50	0/0:13,0:14:9.59:0,10,157	0/0:20,0:20:9.03:0,9,133	0/1:10,0:8:17.92:26,0,18
chr10	108759597	.	TGA	T	5486.37	PASS	AB=0.928;AC=48;AF=0.857;AN=56;BaseQRankSum=3.918;DP=548;FS=5.883;HRun=0;HaplotypeScore=74.0373;InbreedingCoeff=0.3586;MQ=67.21;MQ0=5;MQRankSum=2.027;QD=10.84;ReadPosRankSum=2.932;VQSLOD=4.0083;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,26:33:27.08:316,27,0	0/1:7,1:7:23.31:23,0,108	0/0:20,0:12:6.01:0,6,74	0/1:22,0:16:5.77:6,0,42	1/1:7,18:25:18:212,18,0	1/1:4,15:19:15.96:292,16,0	1/1:15,1:19:38.22:323,38,0	1/1:18,0:16:11.25:112,11,0	1/1:4,16:20:20.84:225,21,0	0/0:22,0:22:11.14:0,11,483	0/1:23,1:24:43.09:43,0,445	1/1:2,14:17:14.88:155,15,0	1/1:4,16:20:17.89:212,18,0	1/1:4,12:17:9.03:106,9,0	1/1:8,14:22:18.05:212,18,0	0/1:16,2:19:13.38:13,0,434	1/1:7,16:25:12.53:269,13,0	1/1:10,9:19:36.09:412,36,0	1/1:5,6:9:18.02:188,18,0	1/1:1,14:15:21.06:241,21,0	1/1:8,19:28:8.98:308,9,0	1/1:5,6:11:14.86:145,15,0	1/1:2,11:13:9.03:106,9,0	1/1:7,22:30:33.10:388,33,0	1/1:2,16:18:12.04:141,12,0	1/1:4,12:15:29.91:320,30,0	1/1:5,18:23:38.77:424,39,0	1/1:6,5:11:28.58:295,29,0
chr10	108761478	.	G	GAAA	7111.30	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=7.026;DP=536;FS=28.992;HRun=13;HaplotypeScore=124.0662;InbreedingCoeff=0.8513;MQ=50.47;MQ0=19;MQRankSum=-9.781;QD=19.81;ReadPosRankSum=-6.887;VQSLOD=-0.6352;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:34,5:41:85.73:1097,86,0	0/0:6,0:7:14.96:0,15,147	0/0:13,0:5:2.77:0,3,25	0/1:20,0:2:0:0,0,0	0/0:20,0:20:29.76:0,30,305	0/0:12,0:14:22.14:0,22,222	0/0:20,0:18:32.85:0,33,339	1/1:30,2:31:48.93:681,49,0	0/0:17,0:20:31.06:0,31,322	0/0:23,0:23:9.32:0,9,313	0/0:21,0:21:23.51:0,24,243	1/1:13,0:13:11.93:141,12,0	1/1:6,1:7:14.99:164,15,0	1/1:13,1:13:24.03:332,24,0	1/1:12,2:13:24.08:328,24,0	0/0:18,0:18:33.35:0,33,347	1/1:22,2:20:18.06:293,18,0	1/1:8,2:11:21:276,21,0	1/1:22,0:21:29.04:346,29,0	1/1:12,6:17:31.93:368,32,0	0/1:7,0:7:26.29:34,0,26	1/1:21,4:24:40.74:523,41,0	1/1:12,4:17:32.91:364,33,0	1/1:12,2:14:24:289,24,0	0/0:15,0:17:23.36:0,23,243	1/1:27,5:35:39.41:790,39,0	1/1:21,3:27:62.51:767,63,0	1/1:9,1:9:18.06:318,18,0
chr10	108761708	.	G	GA	3916.13	PASS	AB=0.713;AC=18;AF=0.321;AN=56;BaseQRankSum=-10.511;DP=611;FS=3.713;HRun=11;HaplotypeScore=67.3379;InbreedingCoeff=0.4797;MQ=71.37;MQ0=0;MQRankSum=-0.523;QD=14.61;ReadPosRankSum=-1.978;VQSLOD=3.6026;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:4,16:20:1.37:351,0,1	0/1:5,1:6:12.51:13,0,98	0/0:25,0:16:21.91:0,22,131	0/1:15,0:15:0.42:0,0,45	0/0:26,1:27:32.24:0,32,426	0/0:28,0:30:76.86:0,77,608	0/0:23,0:25:28.36:0,28,393	0/1:16,11:27:30.63:266,0,31	0/0:23,0:24:31.78:0,32,373	0/1:18,2:21:7.97:8,0,301	0/0:18,0:18:38.80:0,39,302	0/0:22,0:22:59.75:0,60,462	0/0:20,0:20:41.80:0,42,325	0/0:16,0:16:32.84:0,33,255	0/0:25,0:25:65.73:0,66,511	0/0:31,0:31:77.65:0,78,604	1/1:5,21:26:30.87:494,31,0	0/1:6,14:22:15.66:372,0,16	1/1:7,22:29:45.83:622,46,0	1/1:6,12:19:31.98:312,32,0	0/1:4,15:19:1.38:351,0,1	0/0:23,0:23:35.11:0,35,415	0/0:22,0:23:52.81:0,53,400	0/0:16,0:16:41.84:0,42,325	0/0:18,0:18:38.82:0,39,302	1/1:5,18:23:24.86:433,25,0	1/1:7,22:31:46.05:615,46,0	0/1:1,7:8:11.16:79,0,11
chr10	108763486	.	GAGA	G	4120.48	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.435;DP=585;FS=3.235;HRun=0;HaplotypeScore=84.5389;InbreedingCoeff=0.9817;MQ=79.51;MQ0=0;MQRankSum=-3.992;QD=43.83;ReadPosRankSum=2.240;VQSLOD=4.8572;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,2664	0/0:4,0:4:9.03:0,9,208	0/0:27,0:25:66.65:0,67,1365	0/0:14,0:14:22.88:0,23,494	1/1:2,15:17:45.15:760,45,0	1/1:0,22:22:63.22:1074,63,0	1/1:0,21:21:60.21:1021,60,0	0/0:31,0:31:87.30:0,87,1974	1/1:0,21:21:51.17:869,51,0	0/0:21,0:21:60.21:0,60,1363	0/0:5,0:5:15.05:0,15,345	0/0:17,0:17:51.18:0,51,1157	0/0:15,0:15:39.13:0,39,878	0/0:21,0:21:63.22:0,63,1451	0/0:28,0:28:84.29:0,84,1935	0/0:28,0:28:84.28:0,84,1876	0/0:22,0:22:66.23:0,66,1498	0/0:20,0:20:60.21:0,60,1381	0/0:22,0:22:66.10:0,66,1336	0/0:11,0:11:30.10:0,30,672	0/0:31,0:31:93.32:0,93,2144	0/0:21,0:21:57.20:0,57,1314	0/0:13,0:13:39.03:0,39,845	0/0:36,0:36:99:0,105,2361	1/1:0,13:13:24.08:396,24,0	0/0:17,0:17:45.15:0,45,1009	0/0:30,0:29:87.27:0,87,1899	0/0:16,0:16:42.14:0,42,965
chr10	108763763	.	GGAAAAAAAAAAAAA	G	2219.44	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=1.042;DP=428;FS=8.624;HRun=0;HaplotypeScore=86.2882;InbreedingCoeff=0.5963;MQ=39.46;MQ0=123;MQRankSum=0.051;QD=8.13;ReadPosRankSum=3.843;VQSLOD=0.7096;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:18:89.34:89,0,164	0/0:2,0:2:6:0,6,100	0/0:19,0:1:3.01:0,3,56	0/0:30,0:2:3.01:0,3,82	0/0:13,0:13:26.81:0,27,720	0/0:16,0:12:12.04:0,12,663	0/0:15,0:13:10.59:0,11,428	1/1:18,0:14:33.88:225,34,0	0/0:14,0:12:32.60:0,33,457	0/0:11,0:8:27.08:0,27,1086	0/0:15,0:12:30.04:0,30,836	1/1:12,0:7:14.83:103,15,0	1/1:7,0:6:17.86:135,18,0	1/1:12,0:10:9.76:109,10,0	0/1:14,0:10:99:161,0,128	0/0:13,0:9:26.25:0,26,667	1/1:29,0:25:24.99:320,25,0	1/1:22,0:15:14.63:151,15,0	0/1:11,0:6:26.42:52,0,26	1/1:13,0:11:18.82:193,19,0	1/1:13,0:8:10.94:97,11,0	1/1:3,5:8:5.67:42,6,0	1/1:12,0:12:20.37:139,20,0	0/1:14,0:12:57.93:58,0,146	0/0:7,0:5:12.02:0,12,516	1/1:14,0:13:34.06:270,34,0	1/1:12,0:11:24.32:192,24,0	1/1:39,0:7:13.79:89,14,0
chr10	108764560	.	C	CT	3577.25	PASS	AB=0.788;AC=34;AF=0.607;AN=56;BaseQRankSum=-0.736;DP=599;FS=0.000;HRun=13;HaplotypeScore=77.3464;InbreedingCoeff=0.3006;MQ=66.00;MQ0=7;MQRankSum=-0.470;QD=7.55;ReadPosRankSum=-0.723;VQSLOD=2.4656;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,31:42:52.61:453,53,0	0/0:9,0:11:13.82:0,14,88	0/0:10,0:9:1.78:0,2,5	0/1:14,0:14:8.86:9,0,15	0/0:21,0:22:33.03:0,33,214	0/1:18,1:19:2.88:3,0,120	0/0:20,0:20:29.25:0,29,201	0/1:10,13:24:3.10:254,0,3	0/0:14,0:14:26.65:0,27,183	0/0:25,1:29:0.35:0,0,197	0/1:20,0:21:4.38:4,0,133	0/1:4,11:15:26.20:60,0,26	1/1:11,9:20:2.17:50,2,0	1/1:16,14:30:9.45:229,9,0	0/1:6,14:20:11.13:193,0,11	0/0:17,1:17:41.59:0,42,286	1/1:17,19:37:0.89:362,1,0	1/1:9,22:31:0.61:293,1,0	1/1:16,8:26:0.56:178,1,0	1/1:6,8:14:24.85:192,25,0	1/1:3,11:15:17.66:190,18,0	1/1:12,10:23:27.28:211,27,0	1/1:5,10:15:18.02:167,18,0	1/1:11,14:26:29.86:262,30,0	0/1:19,1:21:4:4,0,175	1/1:12,12:23:13.31:252,13,0	0/1:6,8:13:36.10:115,0,36	1/1:7,10:15:6.96:97,7,0
chr10	108765047	.	TTCA	T	4402.40	PASS	AC=32;AF=0.640;AN=50;BaseQRankSum=-2.178;DP=590;FS=0.548;HRun=0;HaplotypeScore=89.6556;InbreedingCoeff=0.9437;MQ=63.93;MQ0=6;MQRankSum=-1.509;QD=13.22;ReadPosRankSum=1.548;VQSLOD=4.2403;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,15:28:30.10:389,30,0	0/0:13,0:13:24.05:0,24,417	./.	./.	0/0:16,0:26:30.03:0,30,352	0/0:11,0:23:30.10:0,30,416	0/0:22,0:32:21.06:0,21,292	./.	0/0:18,0:27:27.07:0,27,336	0/0:19,0:18:24.08:0,24,401	0/0:10,0:10:21.07:0,21,398	1/1:9,10:19:21.03:254,21,0	1/1:7,4:11:6.02:78,6,0	1/1:6,9:15:27.09:350,27,0	1/1:12,12:24:30.10:389,30,0	0/0:6,0:21:36.10:0,36,456	1/1:21,16:38:42.10:526,42,0	1/1:12,14:26:39.08:504,39,0	1/1:11,2:13:6.02:78,6,0	1/1:10,4:14:12.04:156,12,0	1/1:17,8:25:18.06:233,18,0	1/1:12,8:20:21.07:272,21,0	1/1:10,7:17:21.06:261,21,0	1/1:15,8:23:15.05:194,15,0	0/0:9,0:18:21.07:0,21,275	1/1:13,4:17:14.98:173,15,0	1/1:19,11:30:30.10:389,30,0	1/1:7,6:13:12.04:156,12,0
chr10	108766272	.	TA	T	8809.45	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=9.618;DP=618;FS=1.034;HRun=9;HaplotypeScore=67.1508;InbreedingCoeff=0.9986;MQ=80.38;MQ0=0;MQRankSum=-3.224;QD=24.07;ReadPosRankSum=3.729;VQSLOD=5.6056;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:75.04:686,75,0	0/0:6,0:6:18.05:0,18,208	0/0:25,0:24:30.15:0,30,406	0/0:20,0:21:51.70:0,52,498	0/0:25,0:25:75.22:0,75,865	0/0:22,0:22:63.19:0,63,727	0/0:21,0:21:52.03:0,52,580	1/1:4,17:21:50.97:450,51,0	0/0:20,0:21:53.99:0,54,599	0/0:32,0:32:90.25:0,90,1022	0/0:31,1:32:62.89:0,63,968	1/1:1,12:13:36.02:330,36,0	1/1:3,14:17:42.02:384,42,0	1/1:4,22:26:45.88:509,46,0	1/1:3,19:22:54.03:494,54,0	0/0:21,0:21:60.13:0,60,670	1/1:3,25:28:72.04:659,72,0	1/1:1,17:18:34.17:447,34,0	1/1:0,12:12:36.02:328,36,0	1/1:0,33:33:90.03:823,90,0	1/1:2,12:14:36.02:330,36,0	1/1:0,20:20:54.02:494,54,0	1/1:0,25:25:75.04:686,75,0	1/1:0,20:20:54.03:494,54,0	0/0:26,0:26:66.20:0,66,762	1/1:3,28:31:52.46:734,52,0	1/1:2,25:27:75.04:686,75,0	1/1:1,9:10:30.02:274,30,0
chr10	108767148	.	G	GGAGAGAGAGAGA	2008.46	PASS	AC=32;AF=0.593;AN=54;BaseQRankSum=2.217;DP=329;FS=20.224;HRun=0;HaplotypeScore=105.2360;InbreedingCoeff=0.8183;MQ=56.96;MQ0=11;MQRankSum=-0.782;QD=11.88;ReadPosRankSum=-4.340;VQSLOD=-0.6997;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:20:38.05:300,38,0	0/0:1,0:1:2.92:0,3,17	0/0:36,0:20:38.62:0,39,503	0/0:42,0:16:19.66:0,20,335	0/0:11,0:11:26.98:0,27,313	0/0:11,0:11:27.06:0,27,455	0/0:15,0:14:30.06:0,30,612	1/1:11,0:10:11.44:101,11,0	0/0:12,0:12:36.12:0,36,820	0/0:6,0:6:14.77:0,15,219	0/0:3,0:3:5.99:0,6,58	1/1:11,0:10:18.54:146,19,0	1/1:4,0:4:1.25:3,1,0	1/1:11,0:11:22.41:151,22,0	1/1:14,0:12:22.43:180,22,0	0/0:13,0:13:30.10:0,30,639	1/1:1,3:9:2.50:173,2,0	1/1:18,0:18:28.17:337,28,0	1/1:10,0:9:11.92:110,12,0	1/1:4,0:4:3:25,3,0	1/1:14,0:14:18.88:192,19,0	./.	1/1:6,0:4:5.99:48,6,0	1/1:13,0:13:17.81:116,18,0	0/0:7,0:7:21.01:0,21,247	1/1:10,0:10:19.32:155,19,0	1/1:5,0:5:2.85:31,3,0	1/1:6,0:5:12.03:144,12,0
chr10	108767339	.	GA	G	1744.61	PASS	AB=0.579;AC=43;AF=0.896;AN=48;BaseQRankSum=-1.457;DP=151;FS=0.000;HRun=1;HaplotypeScore=23.6133;InbreedingCoeff=0.1456;MQ=45.82;MQ0=2;MQRankSum=-1.133;QD=13.52;ReadPosRankSum=0.338;VQSLOD=2.2931;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:3.01:39,3,0	1/1:0,3:3:3.01:39,3,0	0/0:2,0:1:3.01:0,3,47	0/0:4,0:2:1.25:0,1,3	1/1:0,5:5:3.01:39,3,0	1/1:0,5:5:6.02:68,6,0	0/1:3,8:11:26.70:167,0,27	1/1:0,7:7:16.87:85,17,0	1/1:1,2:3:3.01:39,3,0	1/1:0,4:4:12.04:145,12,0	1/1:2,4:6:2.80:13,3,0	1/1:2,5:7:14.92:131,15,0	1/1:1,4:5:8.95:81,9,0	1/1:0,10:10:3:39,3,0	1/1:6,1:7:5.99:59,6,0	1/1:4,6:10:29.44:314,29,0	1/1:1,2:3:8.10:58,8,0	1/1:0,5:5:2.98:39,3,0	1/1:1,1:1:2.74:12,3,0	./.	1/1:0,6:6:3.01:38,3,0	./.	./.	1/1:3,2:5:5.93:40,6,0	1/1:0,6:6:9.03:111,9,0	1/1:0,6:6:17.97:186,18,0	1/1:1,4:5:14.63:105,15,0	./.
chr10	108770929	.	GGTGTGTGTGT	G	1027.92	PASS	AB=0.815;AC=26;AF=0.520;AN=50;BaseQRankSum=3.376;DP=443;FS=9.941;HRun=0;HaplotypeScore=126.7091;InbreedingCoeff=0.3247;MQ=65.39;MQ0=15;MQRankSum=-1.256;QD=3.91;ReadPosRankSum=1.905;VQSLOD=2.0820;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:25:4.59:117,5,0	./.	./.	./.	0/0:16,0:16:12.04:0,12,261	0/0:5,0:7:6.02:0,6,236	0/1:12,0:14:21.18:21,0,24	1/1:17,0:16:5.28:49,5,0	0/0:9,0:15:21.05:0,21,455	0/0:19,0:18:12.04:0,12,412	0/0:10,0:11:12.04:0,12,428	0/1:12,0:14:18.61:19,0,53	0/0:5,0:8:1.49:0,1,60	0/1:5,0:7:4.15:4,0,95	0/1:8,0:12:25.23:85,0,25	0/0:11,0:12:18.05:0,18,600	1/1:17,3:20:3.01:89,3,0	1/1:13,0:17:6.02:91,6,0	1/1:17,3:19:8.20:128,8,0	1/1:9,0:10:3.01:65,3,0	0/1:28,11:39:0:0,0,0	0/0:8,0:8:3.01:0,3,36	0/1:10,0:11:11.02:11,0,33	1/1:15,0:20:5.37:32,5,0	0/0:14,0:15:24.07:0,24,647	1/1:15,0:15:5.37:34,5,0	1/1:6,1:6:3.01:89,3,0	1/1:3,7:10:12.04:355,12,0
chr10	108773777	.	CTGTGTGTGTGTGTGTGTGTG	C	4548.94	PASS	AB=0.793;AC=15;AF=0.268;AN=56;BaseQRankSum=8.057;DP=601;FS=8.073;HRun=0;HaplotypeScore=278.4267;InbreedingCoeff=0.6453;MQ=61.88;MQ0=26;MQRankSum=-4.093;QD=24.99;ReadPosRankSum=0.026;VQSLOD=2.1914;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,6:24:11.91:415,12,0	0/0:12,0:12:18.06:0,18,1309	0/0:33,0:21:6.02:0,6,117	0/0:26,0:16:9.03:0,9,255	0/0:14,0:27:35.73:0,36,1466	0/0:14,0:24:27.09:0,27,1077	0/0:25,0:23:27.09:0,27,1226	0/1:29,0:29:19.09:19,0,94	0/0:10,0:16:30.10:0,30,1266	0/0:26,0:27:54.18:0,54,3333	0/0:10,0:11:24.08:0,24,1526	0/0:20,0:20:30.10:0,30,2462	0/0:20,0:20:42.14:0,42,2919	0/0:15,0:14:36.11:0,36,2716	0/0:26,0:27:54.19:0,54,3924	0/0:23,0:25:60.21:0,60,4635	0/1:12,8:20:99:761,0,129	1/1:12,1:14:3.88:296,4,0	1/1:15,4:19:5.39:270,5,0	1/1:17,8:24:18.01:594,18,0	0/0:14,0:11:0.47:0,0,1	0/0:22,0:21:33.11:0,33,2446	0/0:17,0:19:31.50:0,31,2404	0/0:31,0:33:75.24:0,75,5589	0/0:12,0:13:12.51:0,13,562	1/1:12,7:18:19.28:515,19,0	0/1:10,8:18:3.90:878,0,4	1/1:6,6:11:15.05:800,15,0
chr10	108774129	.	GAA	G	1137.61	PASS	AB=0.889;AC=12;AF=0.214;AN=56;BaseQRankSum=3.473;DP=482;FS=6.803;HRun=12;HaplotypeScore=88.7176;InbreedingCoeff=0.7828;MQ=60.64;MQ0=13;MQRankSum=0.479;QD=11.61;ReadPosRankSum=2.507;VQSLOD=2.1938;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:38:91.69:0,92,1208	0/1:4,1:5:18.49:18,0,102	0/0:18,0:8:14.82:0,15,165	0/1:16,1:9:10.90:11,0,153	1/1:4,11:15:29.97:287,30,0	1/1:3,10:12:16.60:233,17,0	1/1:6,11:16:29.79:286,30,0	0/0:19,0:17:45.15:0,45,648	1/1:6,7:12:14.96:152,15,0	0/0:19,0:19:51.11:0,51,701	0/0:20,0:21:53.14:0,53,698	0/0:9,0:9:18.06:0,18,268	0/0:8,0:8:21.04:0,21,287	0/0:16,0:16:39.12:0,39,542	0/0:14,0:14:32.72:0,33,395	0/0:14,0:16:41.11:0,41,532	0/0:21,0:22:57.14:0,57,779	0/0:13,0:14:39.05:0,39,497	0/0:15,0:15:38.61:0,39,529	0/0:24,0:26:65.18:0,65,862	0/0:15,0:17:47.13:0,47,638	0/0:7,0:7:18.05:0,18,248	0/0:18,0:19:54.18:0,54,782	0/0:23,0:24:56.16:0,56,775	1/1:2,14:17:28.64:329,29,0	0/0:22,0:25:61.10:0,61,688	0/0:14,0:15:40.97:0,41,509	0/0:10,0:12:32.77:0,33,416
chr10	108774263	.	CG	C	8354.66	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=7.547;DP=433;FS=3.531;HRun=2;HaplotypeScore=55.0265;InbreedingCoeff=0.8885;MQ=51.25;MQ0=1;MQRankSum=-5.358;QD=25.79;ReadPosRankSum=0.754;VQSLOD=4.5948;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,24:30:59.94:684,60,0	0/0:10,0:10:30.05:0,30,350	0/0:16,0:8:17.13:0,17,171	0/0:11,0:2:3.01:0,3,45	1/1:10,16:26:68.90:733,69,0	1/1:1,10:11:33.11:421,33,0	1/1:5,11:15:29.99:344,30,0	1/1:11,19:30:77.90:841,78,0	1/1:2,9:10:24.06:282,24,0	0/0:30,1:31:51.54:0,52,1072	0/0:22,0:22:60.14:0,60,799	1/1:0,5:5:9.03:116,9,0	1/1:0,8:7:12.04:155,12,0	1/1:0,6:6:15.05:193,15,0	1/1:0,21:20:42.14:542,42,0	0/0:18,0:18:51.15:0,51,725	1/1:4,17:21:45.49:514,45,0	1/1:4,8:12:27.05:313,27,0	1/1:3,8:11:33.02:364,33,0	1/1:6,10:16:32.78:331,33,0	1/1:0,6:5:12.04:154,12,0	1/1:1,10:11:27.04:330,27,0	1/1:0,12:11:18.06:231,18,0	1/1:1,13:14:24.08:309,24,0	1/1:2,10:12:27.08:335,27,0	1/1:7,14:20:9.70:587,10,0	1/1:9,12:20:48.08:535,48,0	1/1:0,1:1:3.01:38,3,0
chr10	108774281	.	GA	G	2367.40	PASS	AB=0.774;AC=21;AF=0.375;AN=56;BaseQRankSum=1.309;DP=472;FS=12.583;HRun=12;HaplotypeScore=82.6870;InbreedingCoeff=0.7285;MQ=54.35;MQ0=0;MQRankSum=-3.802;QD=11.33;ReadPosRankSum=0.208;VQSLOD=1.8079;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,19:28:44.81:348,45,0	0/0:9,0:9:24.05:0,24,244	0/1:17,1:11:37.15:37,0,86	0/0:15,0:7:14.91:0,15,118	0/0:11,0:24:26.63:0,27,232	0/0:8,0:17:31.57:0,32,180	0/0:10,0:20:43.94:0,44,244	1/1:13,24:38:43.92:412,44,0	0/0:4,0:14:25.95:0,26,144	0/0:24,2:27:8.18:0,8,432	0/0:19,1:21:27.01:0,27,481	0/1:3,1:4:14.20:14,0,52	0/0:12,0:11:27.05:0,27,273	0/0:8,0:8:18.03:0,18,182	0/0:17,0:19:35.12:0,35,326	0/0:16,1:17:18.31:0,18,339	1/1:5,12:17:23.68:185,24,0	1/1:3,11:14:25.33:212,25,0	1/1:4,11:16:34.66:250,35,0	1/1:4,15:20:42.34:304,42,0	0/1:2,6:8:12.52:98,0,13	0/0:10,0:10:24.01:0,24,233	0/0:10,1:12:9.67:0,10,265	0/0:18,0:18:33.92:0,34,321	0/0:4,0:17:31.88:0,32,174	1/1:4,22:26:37.32:460,37,0	1/1:5,10:14:29.88:232,30,0	1/1:0,1:1:2.99:23,3,0
chr10	108775916	.	GAAAAC	G	4080.24	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-8.190;DP=667;FS=7.370;HRun=0;HaplotypeScore=170.0721;InbreedingCoeff=0.9641;MQ=69.60;MQ0=3;MQRankSum=-2.363;QD=31.15;ReadPosRankSum=-0.439;VQSLOD=3.0285;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:55.35:0,55,2023	0/0:6,0:6:12.02:0,12,264	0/0:26,0:19:15.05:0,15,269	0/0:23,0:18:13.05:0,13,312	1/1:10,19:29:45.11:758,45,0	1/1:9,12:21:30.10:569,30,0	1/1:8,27:35:63.22:1176,63,0	0/0:28,0:28:28.17:0,28,944	1/1:6,14:20:30.10:552,30,0	0/0:31,0:31:69.23:0,69,1920	0/0:21,0:21:51.17:0,51,1364	0/0:23,0:23:48.16:0,48,994	0/0:18,0:18:14.13:0,14,739	0/0:25,0:25:63.21:0,63,1242	0/0:24,0:24:26.17:0,26,975	0/0:25,0:25:57.18:0,57,1491	0/0:33,0:33:69.24:0,69,1446	0/0:16,0:16:30.10:0,30,642	0/0:21,0:21:20.14:0,20,812	0/0:28,0:28:66.22:0,66,1434	0/0:19,0:19:36.12:0,36,734	0/0:23,0:23:39.22:0,39,1235	0/0:22,0:22:43.96:0,44,861	0/0:32,0:32:72.22:0,72,1490	1/1:4,22:26:54.19:1025,54,0	0/0:21,0:21:54.10:0,54,1025	0/0:29,0:29:45.24:0,45,1359	0/0:5,0:5:9.03:0,9,192
chr10	108776409	.	TG	T	19759.63	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=14.007;DP=735;FS=8.916;HRun=3;HaplotypeScore=121.9268;InbreedingCoeff=0.9982;MQ=58.68;MQ0=6;MQRankSum=1.825;QD=33.10;ReadPosRankSum=4.315;VQSLOD=3.6813;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,55:57:99:1894,153,0	0/0:10,0:10:30.10:0,30,432	0/0:26,0:18:51.17:0,51,717	0/0:27,0:18:54.11:0,54,737	1/1:2,21:23:57.18:706,57,0	1/1:0,18:18:51.16:631,51,0	1/1:1,26:27:72.23:892,72,0	1/1:1,25:24:66.18:793,66,0	1/1:0,34:34:96.30:1190,96,0	0/0:36,0:36:99:0,108,1524	0/0:18,0:18:51.16:0,51,715	1/1:1,24:25:69.22:855,69,0	1/1:1,26:27:72.23:892,72,0	1/1:0,32:32:90.28:1116,90,0	1/1:0,34:34:84.26:1040,84,0	0/0:21,0:21:60.17:0,60,827	1/1:1,21:22:50.18:697,50,0	1/1:1,21:22:63.20:781,63,0	1/1:3,14:14:39.11:472,39,0	1/1:1,21:22:57.18:705,57,0	1/1:2,45:47:99:1599,129,0	1/1:1,28:29:78.25:967,78,0	1/1:0,26:26:68.79:855,69,0	1/1:0,25:25:69.22:852,69,0	1/1:0,24:24:69.22:855,69,0	1/1:1,27:28:81.25:1003,81,0	1/1:2,22:24:60.19:741,60,0	1/1:1,7:7:18.06:223,18,0
chr10	108776845	.	GACACACACACACACACAC	G	674.37	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=3.247;DP=579;FS=26.267;HRun=0;HaplotypeScore=204.0660;InbreedingCoeff=0.6390;MQ=69.49;MQ0=14;MQRankSum=-2.087;QD=5.62;ReadPosRankSum=-0.030;VQSLOD=1.3135;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:33.11:0,33,1145	0/0:5,0:5:9.03:0,9,472	./.	0/0:56,0:26:1.25:0,1,3	1/1:16,6:21:2.96:20,3,0	1/1:11,6:18:6.02:270,6,0	1/1:20,11:31:2.14:66,2,0	0/0:15,0:15:9.03:0,9,284	1/1:13,9:22:8.89:304,9,0	0/0:15,0:15:21.07:0,21,1255	0/0:11,0:12:18.06:0,18,1354	0/0:28,0:28:12.04:0,12,846	0/0:21,0:22:17.89:0,18,1407	0/0:27,0:27:39:0,39,2533	0/0:24,0:24:15.05:0,15,1153	0/0:19,0:19:27.09:0,27,1335	0/0:17,0:26:33.11:0,33,1139	0/0:21,0:29:22.63:0,23,748	0/0:11,0:12:13.66:0,14,370	0/1:8,0:8:0:0,0,0	0/0:31,0:30:30.05:0,30,1048	0/0:18,0:22:8.32:0,8,419	1/1:13,0:13:0.47:1,0,0	0/0:24,0:24:12.04:0,12,925	1/1:3,3:6:3.01:145,3,0	0/0:19,0:20:27.46:0,27,1057	0/0:6,0:7:6.02:0,6,240	0/0:2,0:2:3.01:0,3,91
chr10	108776847	.	C	CACACAT	1489.53	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=3.429;DP=590;FS=8.959;HRun=0;HaplotypeScore=131.2811;InbreedingCoeff=0.6883;MQ=67.98;MQ0=16;MQRankSum=-1.076;QD=7.72;ReadPosRankSum=0.282;VQSLOD=2.1253;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:41.90:0,42,335	0/0:6,0:5:11.94:0,12,91	0/0:41,0:22:50.47:0,50,414	0/0:55,0:25:30.42:0,30,378	0/0:22,0:21:20.63:0,21,162	0/0:18,0:18:26.97:0,27,260	0/0:31,0:31:6.90:0,7,196	0/0:15,0:15:28.80:0,29,200	0/0:21,0:21:29.86:0,30,276	0/0:17,0:17:36.46:0,36,318	0/0:14,0:14:27.48:0,27,326	1/1:9,18:30:11.50:333,11,0	1/1:24,0:24:4.78:183,5,0	1/1:26,0:26:45.56:555,46,0	1/1:23,0:23:14.70:203,15,0	0/0:21,0:21:38.94:0,39,362	0/0:27,0:27:57:0,57,534	0/1:30,0:30:36.49:36,0,287	0/0:12,0:12:27.99:0,28,189	0/0:7,0:7:8.78:0,9,72	0/0:33,0:31:50.79:0,51,397	1/1:22,0:21:8.92:214,9,0	0/1:13,0:13:0:0,0,0	0/1:25,0:25:0.68:130,0,1	0/0:6,0:6:8.88:0,9,80	0/0:21,0:20:47.21:0,47,418	0/0:9,0:8:8.96:0,9,73	0/0:3,0:2:2.94:0,3,18
chr10	108776849	.	C	CACAT	1675.16	PASS	AB=0.980;AC=12;AF=0.214;AN=56;BaseQRankSum=1.778;DP=595;FS=7.589;HRun=0;HaplotypeScore=116.8330;InbreedingCoeff=0.7596;MQ=66.87;MQ0=19;MQRankSum=0.475;QD=10.09;ReadPosRankSum=0.803;VQSLOD=1.9374;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:41.90:0,42,335	0/0:6,0:5:11.94:0,12,91	0/0:41,0:22:50.46:0,50,414	0/0:54,0:24:30.10:0,30,378	0/0:22,0:21:20.56:0,21,162	0/0:18,0:18:26.97:0,27,236	0/0:31,0:31:18.60:0,19,206	0/0:13,0:13:28.70:0,29,210	0/0:20,0:20:29.86:0,30,248	0/0:19,0:18:42.14:0,42,356	0/0:15,0:15:27.01:0,27,313	1/1:28,0:28:9.12:206,9,0	0/1:23,1:24:5.06:212,0,5	1/1:25,0:26:45.98:623,46,0	1/1:4,17:24:15.04:344,15,0	0/0:21,0:21:45.40:0,45,398	0/0:26,0:26:57.92:0,58,479	0/0:30,0:30:30.20:0,30,304	0/0:12,0:12:29.54:0,30,215	0/0:9,0:8:8.87:0,9,72	0/0:32,0:30:50.79:0,51,397	1/1:23,1:23:19.95:225,20,0	0/1:13,0:13:0:0,0,0	1/1:6,17:27:3.24:229,3,0	0/0:6,0:6:8.88:0,9,70	0/0:21,0:20:48.83:0,49,414	0/0:9,0:8:8.98:0,9,73	0/0:3,0:2:2.94:0,3,18
chr10	108776851	.	C	CAT	1104.36	PASS	AB=0.783;AC=12;AF=0.214;AN=56;BaseQRankSum=3.935;DP=600;FS=3.970;HRun=0;HaplotypeScore=97.2007;InbreedingCoeff=0.6704;MQ=64.13;MQ0=22;MQRankSum=2.951;QD=6.82;ReadPosRankSum=1.932;VQSLOD=3.0458;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:41.90:0,42,335	0/0:6,0:5:11.94:0,12,91	0/0:40,0:21:50.95:0,51,415	0/0:52,0:22:30.31:0,30,378	0/0:22,0:21:20.56:0,21,162	0/0:18,0:18:26.89:0,27,208	0/0:30,0:30:29.42:0,29,218	0/0:12,0:12:32.56:0,33,245	0/0:19,0:19:29.77:0,30,220	0/0:22,0:21:47.87:0,48,408	0/0:15,0:15:29.99:0,30,304	0/1:28,0:27:28.06:47,0,28	1/1:7,14:24:2.03:131,2,0	1/1:26,0:26:46.61:520,47,0	1/1:19,1:20:15.05:200,15,0	0/0:23,0:21:44.94:0,45,388	0/0:26,0:26:61.86:0,62,457	0/0:32,0:32:36:0,36,337	0/0:12,0:12:9.71:0,10,199	0/0:11,0:10:11.25:0,11,84	0/0:35,0:33:50.79:0,51,397	1/1:24,0:23:0:203,0,0	0/1:3,9:13:0:0,0,0	1/1:27,0:27:15.02:158,15,0	0/0:6,0:6:8.84:0,9,56	0/0:25,0:24:54.68:0,55,437	0/0:8,0:7:8.98:0,9,72	0/0:3,0:2:2.94:0,3,18
chr10	108777174	.	C	CTAA	307.73	PASS	AB=0.780;AC=2;AF=0.036;AN=56;BaseQRankSum=4.362;DP=619;FS=21.554;HRun=0;HaplotypeScore=91.6499;InbreedingCoeff=-0.0409;MQ=72.26;MQ0=0;MQRankSum=4.483;QD=14.65;ReadPosRankSum=-3.437;VQSLOD=1.1904;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.20:0,75,1331	0/0:9,0:9:24.08:0,24,446	0/1:6,4:10:99:278,0,138	0/1:9,2:11:99:119,0,367	0/0:11,0:11:21.07:0,21,382	0/0:16,0:16:48.16:0,48,895	0/0:25,0:25:69.22:0,69,1247	0/0:23,0:23:57.19:0,57,1030	0/0:28,0:28:78.27:0,78,1454	0/0:21,0:21:51.15:0,51,864	0/0:8,0:8:21.07:0,21,387	0/0:24,0:24:72.23:0,72,1310	0/0:30,0:30:90.29:0,90,1646	0/0:32,0:32:96.32:0,96,1739	0/0:29,0:29:87.30:0,87,1605	0/0:19,0:19:57.20:0,57,1047	0/0:38,0:38:99:0,114,2091	0/0:29,0:29:84.27:0,84,1534	0/0:20,0:20:54.16:0,54,918	0/0:3,0:3:9.03:0,9,164	0/0:71,0:71:99:0,190,3352	0/0:12,0:12:27.09:0,27,497	0/0:9,0:9:21.07:0,21,387	0/0:37,0:37:99:0,108,1941	0/0:13,0:13:39.11:0,39,661	0/0:23,0:23:66.23:0,66,1221	0/0:36,0:36:99:0,105,1957	0/0:5,0:5:12.04:0,12,224
chr10	108777294	.	GACTA	G	4321.86	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=0.059;DP=687;FS=2.637;HRun=0;HaplotypeScore=220.8070;InbreedingCoeff=0.9994;MQ=80.39;MQ0=0;MQRankSum=-11.996;QD=53.36;ReadPosRankSum=-0.174;VQSLOD=4.9115;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,111,2953	0/0:15,0:15:39.11:0,39,968	0/0:17,0:17:48.16:0,48,1209	0/0:25,0:25:69.69:0,70,1704	1/1:0,8:8:24.08:454,24,0	1/1:2,15:17:48.16:909,48,0	1/1:1,21:22:63.22:1190,63,0	0/0:27,0:27:78.27:0,78,2040	1/1:3,17:20:57.17:1032,57,0	0/0:27,0:27:75.26:0,75,1965	0/0:14,0:14:39.13:0,39,1039	0/0:37,0:37:99:0,102,2733	0/0:32,0:32:93.29:0,93,2394	0/0:32,0:32:93.32:0,93,2468	0/0:36,0:36:99:0,108,2885	0/0:15,0:15:45.15:0,45,1153	0/0:32,0:32:90.31:0,90,2374	0/0:42,0:42:99:0,111,2996	0/0:16,0:16:42.14:0,42,1090	0/0:16,0:16:48.13:0,48,1235	0/0:57,0:57:99:0,160,4129	0/0:17,0:17:51.18:0,51,1367	0/0:17,0:17:51.18:0,51,1366	0/0:29,0:29:81.28:0,81,2122	1/1:0,14:14:39.13:738,39,0	0/0:27,0:27:78.27:0,78,2092	0/0:24,0:24:69.24:0,69,1860	0/0:11,0:11:33.11:0,33,885
chr10	108777318	.	T	TC	25415.89	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=10.682;DP=683;FS=1.306;HRun=0;HaplotypeScore=145.6173;InbreedingCoeff=0.9931;MQ=81.74;MQ0=0;MQRankSum=-5.427;QD=43.90;ReadPosRankSum=5.003;VQSLOD=4.0386;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:41:99:1823,114,0	0/0:11,0:11:24.08:0,24,336	0/0:16,0:16:48.16:0,48,661	0/0:24,0:24:60.15:0,60,778	1/1:0,5:5:12.04:191,12,0	1/1:1,19:20:48.16:765,48,0	1/1:1,33:34:93.32:1484,93,0	1/1:2,32:34:96.31:1512,96,0	1/1:2,15:17:51.15:788,51,0	0/0:24,0:24:72.24:0,72,1007	0/0:13,0:13:36.12:0,36,502	1/1:1,27:28:81.28:1295,81,0	1/1:2,32:34:99:1611,102,0	1/1:2,31:33:84.29:1341,84,0	1/1:1,34:35:99:1631,102,0	0/0:16,0:16:48.16:0,48,671	1/1:0,32:32:87.28:1391,87,0	1/1:3,38:41:99:1654,105,0	1/1:1,19:20:54.17:840,54,0	1/1:0,19:19:45.15:718,45,0	1/1:4,57:61:99:2686,169,0	1/1:0,17:17:42.28:714,42,0	1/1:1,17:18:51.17:815,51,0	1/1:0,19:19:54.18:863,54,0	1/1:0,13:13:39.13:622,39,0	1/1:2,23:25:75.20:1141,75,0	1/1:1,23:24:69.24:1102,69,0	1/1:0,9:9:27.09:432,27,0
chr10	108780916	.	CGTGTGTGTGTGT	C	531.33	PASS	AB=0.979;AC=17;AF=0.340;AN=50;BaseQRankSum=0.565;DP=635;FS=14.638;HRun=0;HaplotypeScore=254.4552;InbreedingCoeff=0.2247;MQ=57.10;MQ0=14;MQRankSum=-1.975;QD=1.56;ReadPosRankSum=0.399;VQSLOD=0.6686;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:8.51:0,9,48	0/0:11,0:11:17.19:0,17,360	./.	0/0:32,0:21:6.02:0,6,82	0/1:13,0:13:0:0,0,0	./.	0/0:24,0:24:0.47:0,0,1	0/0:38,0:33:19.76:0,20,258	0/0:15,1:15:5.65:0,6,31	0/0:26,0:25:18.05:0,18,553	0/0:8,0:8:9.03:0,9,288	0/1:28,0:28:12.22:12,0,77	1/1:13,1:14:1.01:51,1,0	0/0:18,2:20:11.48:0,11,65	0/0:23,0:23:12.93:0,13,61	0/0:14,0:15:30.09:0,30,1208	1/1:33,2:35:11.74:192,12,0	0/1:21,2:24:60.12:259,0,60	0/1:16,0:14:0.60:5,0,1	0/1:19,1:20:0.69:1,0,8	0/1:72,0:68:22.10:50,0,22	1/1:18,1:20:0.09:1,0,0	1/1:16,0:16:4.83:55,5,0	0/1:33,1:33:0:0,0,1	./.	0/1:37,0:37:32.30:32,0,317	0/0:14,1:15:9.13:0,9,122	0/1:11,0:10:2.76:3,0,44
chr10	108780970	.	TGG	T	1803.33	PASS	AB=0.854;AC=13;AF=0.232;AN=56;BaseQRankSum=14.765;DP=1094;FS=147.557;HRun=3;HaplotypeScore=548.7807;InbreedingCoeff=-0.3147;MQ=36.50;MQ0=10;MQRankSum=-9.822;QD=3.76;ReadPosRankSum=1.843;VQSLOD=-0.4756;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,6:52:47.15:0,47,926	0/1:9,0:9:28.82:29,0,178	0/0:34,0:12:28.81:0,29,458	0/0:40,0:19:45.13:0,45,676	0/0:11,12:23:11.66:0,12,191	0/0:13,1:14:29.05:0,29,521	0/0:33,2:35:19.66:0,20,571	0/0:100,1:94:99:0,176,2241	0/1:15,10:25:99:118,0,165	0/0:20,0:20:34.97:0,35,959	0/0:13,0:13:27.07:0,27,508	0/1:51,5:56:32.08:32,0,579	0/1:27,5:32:99:130,0,327	0/1:39,6:45:90.28:90,0,348	0/1:36,10:46:23.88:24,0,441	0/0:20,0:20:55.37:0,55,931	0/1:25,2:27:94.99:95,0,384	0/1:28,0:28:6.64:7,0,590	0/1:40,2:41:70.04:70,0,726	0/1:22,6:28:10.10:10,0,131	0/0:106,0:104:36.52:0,37,619	0/0:36,16:51:10.01:0,10,239	0/0:26,11:37:0.03:0,0,257	0/0:43,3:46:28.66:0,29,533	0/0:10,5:15:20.38:0,20,328	0/1:61,25:86:99:840,0,1432	0/1:19,15:34:99:246,0,330	0/1:13,8:21:99:263,0,340
chr10	108781031	.	C	CTGTG	7282.68	PASS	AB=0.869;AC=28;AF=0.500;AN=56;BaseQRankSum=6.009;DP=1020;FS=11.472;HRun=0;HaplotypeScore=450.7229;InbreedingCoeff=0.5275;MQ=42.00;MQ0=13;MQRankSum=-5.986;QD=10.73;ReadPosRankSum=-2.483;VQSLOD=2.3828;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,38:66:50.45:1151,50,0	0/0:12,0:12:30.10:0,30,504	0/0:57,0:19:25.13:0,25,338	0/0:48,0:22:41.87:0,42,518	0/0:17,0:22:1.60:0,2,3	0/1:9,0:9:0.11:0,0,0	0/1:18,0:18:0.15:0,0,0	1/1:59,4:49:50.50:728,51,0	0/0:20,0:20:2.65:0,3,18	0/0:45,0:42:99:0,105,1645	0/0:18,0:18:41.78:0,42,611	1/1:46,0:47:2.30:33,2,0	1/1:23,0:24:1.67:102,2,0	0/0:22,0:23:0.33:0,0,3	1/1:37,0:37:3.63:18,4,0	0/0:27,0:27:63.19:0,63,1019	0/1:17,20:39:4.62:918,0,5	1/1:5,14:19:19.88:449,20,0	1/1:12,19:30:0.90:522,1,0	0/1:29,15:48:0.74:342,0,1	1/1:64,23:93:82.07:1369,82,0	0/0:35,0:35:1.41:0,1,6	0/1:28,0:28:0.74:10,0,1	1/1:36,0:38:11.85:96,12,0	0/0:17,0:33:3.47:0,3,9	1/1:73,6:77:16.86:892,17,0	1/1:15,11:26:7.20:451,7,0	0/1:10,2:12:1.44:201,0,1
chr10	108781035	.	G	GTC	930.85	PASS	AB=0.972;AC=23;AF=0.411;AN=56;BaseQRankSum=6.171;DP=1012;FS=13.539;HRun=0;HaplotypeScore=442.0652;InbreedingCoeff=-0.0449;MQ=41.06;MQ0=11;MQRankSum=-5.040;QD=1.33;ReadPosRankSum=3.104;VQSLOD=0.3856;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:66,0:67:23.55:111,0,24	0/0:12,0:12:36.09:0,36,507	0/0:51,0:18:7.18:0,7,464	0/0:51,0:21:50.78:0,51,600	0/0:19,1:20:1.48:0,1,4	0/1:9,0:9:0.05:0,0,0	1/1:13,0:13:2.93:19,3,0	0/1:62,0:49:74.03:74,0,358	0/1:10,10:21:10.12:10,0,13	0/0:42,0:39:99:0,114,1681	0/0:18,0:18:51.08:0,51,693	0/1:53,0:53:17.23:17,0,34	0/1:26,0:26:35.34:35,0,46	0/0:26,0:25:9.69:0,10,65	1/1:38,0:38:0.78:9,1,0	0/0:27,0:27:81.16:0,81,1105	0/1:39,0:39:36.02:53,0,36	1/1:16,0:15:12.11:37,12,0	0/1:30,0:29:25.69:26,0,154	1/1:47,0:47:14.09:130,14,0	0/1:95,0:94:99:192,0,234	0/0:36,0:36:2.98:0,3,11	0/1:32,0:32:38.57:39,0,39	0/1:40,0:40:7.92:63,0,8	0/0:30,0:30:1.49:0,1,7	0/1:74,0:72:99:188,0,351	1/1:26,0:26:7.41:72,7,0	0/1:11,0:11:17.56:18,0,23
chr10	108781145	.	CT	C	3944.18	PASS	AB=0.780;AC=21;AF=0.375;AN=56;BaseQRankSum=10.286;DP=1140;FS=0.334;HRun=2;HaplotypeScore=373.8939;InbreedingCoeff=-0.0863;MQ=44.12;MQ0=7;MQRankSum=-8.778;QD=5.34;ReadPosRankSum=-1.014;VQSLOD=-0.5196;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,17:57:61.45:0,61,1132	0/0:20,0:20:57.19:0,57,849	0/0:40,0:19:54.83:0,55,718	0/0:59,0:25:45.44:0,45,580	1/1:1,7:8:5.09:76,5,0	0/0:0,2:2:0:0,0,0	1/1:0,9:9:8.98:116,9,0	0/1:64,32:86:99:1067,0,1362	1/1:1,1:2:3.01:39,3,0	0/0:45,0:45:99:0,126,1799	0/0:12,0:12:36.11:0,36,515	0/0:24,10:34:18.17:0,18,670	0/1:33,8:39:94.40:94,0,763	0/0:23,13:32:2.56:0,3,431	0/1:32,16:44:38.61:39,0,783	0/0:34,1:34:67.21:0,67,1461	0/1:31,12:40:99:192,0,1004	0/1:24,2:25:44.89:45,0,847	0/1:31,3:33:86.20:86,0,753	0/1:27,19:46:99:342,0,535	0/1:128,43:167:28.83:29,0,1960	0/1:28,21:49:99:212,0,423	0/1:23,12:35:87.88:88,0,510	0/0:37,21:53:36.40:0,36,900	1/1:0,17:17:13.99:193,14,0	0/1:47,27:72:99:889,0,1208	0/1:15,9:24:99:302,0,293	0/1:11,5:16:99:134,0,320
chr10	108781182	.	A	ATG	9085.85	PASS	AB=0.815;AC=33;AF=0.589;AN=56;BaseQRankSum=3.625;DP=1029;FS=62.253;HRun=0;HaplotypeScore=507.7967;InbreedingCoeff=0.1624;MQ=40.12;MQ0=18;MQRankSum=-8.900;QD=11.04;ReadPosRankSum=-1.702;VQSLOD=2.2577;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,13:40:17.24:527,17,0	0/0:13,0:13:36.12:0,36,463	0/0:53,0:19:39.13:0,39,426	0/0:47,0:17:18.10:0,18,289	1/1:5,3:8:6.02:97,6,0	0/1:9,2:11:2.37:92,0,2	0/1:10,6:16:4.44:135,0,4	0/1:67,19:77:14:1145,0,14	0/1:14,3:17:16.79:87,0,17	0/0:41,0:41:99:0,102,1300	0/0:15,0:15:30.10:0,30,385	0/1:29,6:35:35.43:225,0,35	0/1:39,4:41:87:312,0,87	0/1:37,4:36:82.59:136,0,83	1/1:44,9:51:25.13:362,25,0	0/0:35,0:35:93.21:0,93,1143	0/1:21,12:31:37.88:616,0,38	0/1:13,8:20:20.48:420,0,20	0/1:21,7:25:99:415,0,108	1/1:16,7:23:21.06:352,21,0	1/1:71,63:131:24.68:1032,25,0	1/1:24,8:33:1.34:326,1,0	1/1:17,4:21:19.74:305,20,0	1/1:38,5:40:15.76:345,16,0	1/1:24,11:35:19.90:280,20,0	0/1:46,18:63:66.63:1088,0,67	1/1:15,9:24:12.86:486,13,0	1/1:8,4:12:2.94:303,3,0
chr10	108781208	.	CTA	C	686.31	PASS	AB=0.896;AC=18;AF=0.321;AN=56;BaseQRankSum=8.037;DP=993;FS=0.427;HRun=0;HaplotypeScore=596.3534;InbreedingCoeff=-0.2490;MQ=37.68;MQ0=17;MQRankSum=-9.414;QD=1.07;ReadPosRankSum=-2.576;VQSLOD=-0.6409;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:34,6:37:23.53:24,0,49	0/0:13,0:13:32.96:0,33,524	0/0:51,0:15:33.27:0,33,517	0/0:40,0:16:31.74:0,32,453	0/0:13,2:13:0.47:0,0,1	0/0:13,1:14:12.09:0,12,67	0/1:16,1:17:7.41:29,0,7	0/1:51,2:48:99:117,0,498	0/1:19,2:21:30.08:30,0,37	0/0:48,0:48:99:0,144,2635	0/0:18,0:18:48.06:0,48,850	1/1:27,12:39:1.41:103,1,0	0/1:36,14:50:33.95:173,0,34	0/1:39,11:46:36.92:46,0,37	0/1:46,15:57:27.25:70,0,27	0/0:42,0:41:99:0,114,2037	0/1:31,6:35:29.96:30,0,185	0/1:15,0:14:18.53:19,0,59	0/1:21,5:20:70.18:70,0,82	0/1:17,2:19:3.73:4,0,24	0/1:93,2:90:22.88:23,0,65	0/0:33,3:35:7.12:0,7,53	1/1:20,4:24:2.33:8,2,0	0/0:24,7:29:5.43:0,5,21	0/0:31,2:33:3.04:0,3,35	0/1:63,4:66:78.56:79,0,579	0/1:27,2:29:11.82:12,0,169	0/0:7,0:7:4.54:0,5,108
chr10	108781248	.	GTC	G	1163.71	PASS	AB=0.956;AC=21;AF=0.375;AN=56;BaseQRankSum=7.523;DP=1093;FS=2.239;HRun=0;HaplotypeScore=579.5836;InbreedingCoeff=-0.3221;MQ=35.55;MQ0=19;MQRankSum=-11.020;QD=1.62;ReadPosRankSum=-1.111;VQSLOD=-0.3849;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,2:39:48.40:48,0,71	0/0:16,0:16:7.61:0,8,604	0/1:49,0:13:16.22:16,0,198	0/0:83,0:26:35.15:0,35,616	0/1:19,0:17:0.03:0,0,0	1/1:18,0:17:0.24:1,0,0	0/1:25,0:25:10.76:11,0,77	0/1:55,0:47:99:115,0,179	0/0:20,0:20:2.95:0,3,71	0/0:47,0:45:99:0,111,2138	0/0:22,0:22:55.10:0,55,959	0/1:42,0:42:44.64:45,0,110	0/1:48,6:52:99:114,0,110	0/1:49,2:46:3.79:4,0,57	0/0:58,4:58:17.97:0,18,124	0/0:47,0:47:99:0,112,1991	0/1:29,0:30:40.92:81,0,41	0/1:16,3:18:23.96:140,0,24	0/1:38,1:31:55.35:55,0,183	0/0:29,0:28:1.25:0,1,39	0/1:52,0:54:16.82:177,0,17	0/0:47,0:46:12.58:0,13,67	0/1:41,1:42:4.48:4,0,15	1/1:29,2:29:6.69:44,7,0	0/1:30,0:30:16.48:16,0,18	0/1:69,6:73:99:291,0,650	0/1:26,3:29:99:110,0,164	0/1:9,0:9:23.30:38,0,23
chr10	108781252	.	GTGTA	G	3019.80	PASS	AB=0.897;AC=22;AF=0.393;AN=56;BaseQRankSum=5.787;DP=1064;FS=38.323;HRun=0;HaplotypeScore=550.9061;InbreedingCoeff=-0.3881;MQ=36.55;MQ0=19;MQRankSum=-10.246;QD=3.98;ReadPosRankSum=-0.805;VQSLOD=-0.3426;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,7:39:21.96:22,0,88	0/0:18,0:18:48.14:0,48,1078	0/0:50,0:13:29.84:0,30,424	0/0:86,0:28:67.79:0,68,1345	0/0:18,0:17:0.11:0,0,0	1/1:19,0:18:2.71:37,3,0	0/1:23,0:23:54.98:56,0,55	0/1:49,4:45:99:387,0,169	0/0:19,0:19:6.16:0,6,48	0/0:45,0:43:99:0,123,3007	0/0:22,0:22:63.20:0,63,1525	0/1:31,10:41:82.75:170,0,83	0/1:40,12:50:71.79:615,0,72	0/1:38,6:39:38.80:139,0,39	0/1:46,14:56:37.61:38,0,98	0/0:45,0:46:99:0,132,3260	0/1:28,3:29:28.39:233,0,28	0/1:19,1:19:73.32:153,0,73	0/1:32,3:28:99:240,0,102	0/1:24,5:28:11.92:12,0,31	0/1:51,4:50:28.63:159,0,29	0/1:38,8:45:11.68:24,0,12	0/1:33,10:43:7.04:25,0,7	1/1:26,5:29:2.75:15,3,0	0/1:29,0:29:12.79:25,0,13	0/1:62,8:69:99:540,0,577	0/1:23,2:26:99:224,0,128	0/1:9,0:9:9.43:66,0,9
chr10	108781254	.	GTA	G	2711.79	PASS	AB=0.934;AC=28;AF=0.500;AN=56;BaseQRankSum=9.836;DP=1020;FS=24.631;HRun=0;HaplotypeScore=506.9447;InbreedingCoeff=0.0523;MQ=37.73;MQ0=19;MQRankSum=-10.943;QD=3.70;ReadPosRankSum=-1.446;VQSLOD=0.0212;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:37:14.76:19,0,15	0/0:18,0:18:43.55:0,44,748	0/0:50,0:13:29.88:0,30,363	0/0:88,0:28:68.28:0,68,994	0/1:17,0:17:0.03:0,0,1	0/1:18,0:17:0.28:0,0,1	0/1:21,1:22:33.54:39,0,34	0/1:33,12:37:99:634,0,99	0/0:18,0:18:3.55:0,4,34	0/0:45,0:43:99:0,129,2291	0/0:22,0:22:63.20:0,63,1137	0/1:25,12:37:12.37:184,0,12	1/1:41,11:50:35.81:475,36,0	1/1:30,11:36:9.28:82,9,0	0/1:47,12:55:0.02:19,0,0	0/0:47,0:47:99:0,134,2415	1/1:21,8:26:8.30:148,8,0	0/1:19,0:18:36.42:81,0,36	0/1:30,1:24:69.12:160,0,69	1/1:28,1:28:2.12:16,2,0	1/1:44,8:47:34.14:181,34,0	0/1:42,2:43:10.04:23,0,10	1/1:38,3:41:6.35:35,6,0	1/1:27,1:26:1.35:6,1,0	0/1:28,0:28:10.71:32,0,11	0/1:59,8:65:99:533,0,377	0/1:23,2:25:73.57:142,0,74	0/1:9,0:9:8.12:70,0,8
chr10	108781263	.	TGA	T	1462.13	PASS	AB=0.992;AC=37;AF=0.661;AN=56;BaseQRankSum=12.155;DP=985;FS=2.325;HRun=0;HaplotypeScore=443.1656;InbreedingCoeff=0.3187;MQ=39.72;MQ0=20;MQRankSum=-11.079;QD=2.10;ReadPosRankSum=-2.509;VQSLOD=0.5029;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,2:37:4.10:40,4,0	0/0:17,0:17:45.14:0,45,802	0/0:62,0:16:28.50:0,29,421	0/0:90,0:29:72.89:0,73,1115	1/1:15,0:15:0.40:1,0,0	1/1:16,0:15:5.17:36,5,0	0/1:16,0:17:12.92:13,0,42	0/1:48,0:39:14.50:127,0,14	0/1:19,0:19:11.94:12,0,33	0/0:51,0:49:99:0,144,2357	0/0:20,0:20:60.19:0,60,1124	1/1:38,0:39:6.71:137,7,0	1/1:44,1:43:18.10:310,18,0	1/1:37,2:35:8.96:60,9,0	1/1:50,2:48:9.04:36,9,0	0/0:49,0:49:99:0,138,2495	1/1:22,3:22:29.64:168,30,0	0/1:20,0:19:12.67:49,0,13	1/1:20,0:17:18.36:128,18,0	1/1:32,0:32:0.71:16,1,0	1/1:46,1:43:13.37:125,13,0	1/1:40,1:40:1.82:16,2,0	1/1:37,3:41:2.35:8,2,0	1/1:22,1:21:1.26:5,1,0	0/1:27,0:27:0.45:0,0,0	0/1:62,0:61:99:197,0,267	0/1:20,0:20:7.53:86,0,8	1/1:8,1:9:1.98:62,2,0
chr10	108781538	.	C	CTG	27538.47	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=5.758;DP=721;FS=0.379;HRun=0;HaplotypeScore=130.8314;InbreedingCoeff=0.9934;MQ=82.62;MQ0=2;MQRankSum=-8.899;QD=45.82;ReadPosRankSum=4.465;VQSLOD=5.6266;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,38:40:99:2021,108,0	0/0:13,0:13:36.12:0,36,530	0/0:22,0:22:54.45:0,54,741	0/0:26,0:26:50.93:0,51,932	1/1:2,21:22:42.14:786,42,0	1/1:0,21:21:63.22:1180,63,0	1/1:3,22:25:63.21:1129,63,0	1/1:5,26:32:93.30:1680,93,0	1/1:5,26:31:78.27:1443,78,0	0/0:32,0:32:96.31:0,96,1379	0/0:13,0:13:39.13:0,39,571	1/1:1,24:25:63.22:1161,63,0	1/1:4,22:27:72.13:1310,72,0	1/1:4,21:26:69.24:1265,69,0	1/1:5,24:29:75.26:1383,75,0	0/0:14,0:14:39.13:0,39,574	1/1:5,32:37:84.29:1573,84,0	1/1:4,17:21:57.18:1034,57,0	1/1:5,16:21:51.17:935,51,0	1/1:1,12:13:27.09:504,27,0	1/1:5,58:62:99:2899,156,0	1/1:4,17:22:39:722,39,0	1/1:2,18:20:54.12:1004,54,0	1/1:6,35:41:99:1943,105,0	1/1:5,21:26:54.19:1008,54,0	1/1:3,25:28:31.22:1268,31,0	1/1:1,21:23:57.20:1067,57,0	1/1:0,6:6:12.04:225,12,0
chr10	108783977	.	CT	C	8176.56	PASS	AB=0.895;AC=32;AF=0.571;AN=56;BaseQRankSum=12.522;DP=692;FS=4.075;HRun=10;HaplotypeScore=71.7014;InbreedingCoeff=0.8533;MQ=65.24;MQ0=0;MQRankSum=1.081;QD=19.28;ReadPosRankSum=1.555;VQSLOD=5.9493;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:33:75.44:652,75,0	0/0:8,0:8:18.05:0,18,199	0/1:15,3:16:68.59:69,0,185	0/1:13,1:14:15.02:15,0,186	1/1:5,35:40:95.95:833,96,0	1/1:0,13:13:35.99:313,36,0	1/1:7,17:24:46.65:415,47,0	1/1:9,24:33:65.52:547,66,0	1/1:2,18:20:50.99:443,51,0	0/0:29,0:30:78.01:0,78,821	0/0:25,1:26:37.11:0,37,630	0/0:22,0:22:63.15:0,63,682	0/0:18,0:19:50.95:0,51,530	0/0:21,0:21:57.12:0,57,611	0/0:31,0:31:78.20:0,78,855	0/0:23,0:23:66.14:0,66,716	1/1:5,34:39:83.96:729,84,0	1/1:2,34:36:99:886,102,0	1/1:5,24:29:41.76:587,42,0	1/1:3,26:29:71.96:625,72,0	1/1:0,12:12:29.99:260,30,0	0/0:32,1:33:61.11:0,61,865	0/0:26,0:26:63.17:0,63,697	0/0:27,2:29:20.03:0,20,657	1/1:2,17:19:17.81:383,18,0	1/1:3,18:21:53.85:457,54,0	1/1:2,25:27:62.95:547,63,0	1/1:1,16:16:47.99:417,48,0
chr10	108785172	.	TTGTGTGTGTGTGTGTGTGTGTGTG	T	5099.29	PASS	AB=0.855;AC=17;AF=0.304;AN=56;BaseQRankSum=8.790;DP=536;FS=6.092;HRun=0;HaplotypeScore=289.6337;InbreedingCoeff=0.6682;MQ=65.07;MQ0=12;MQRankSum=-3.375;QD=23.72;ReadPosRankSum=-1.434;VQSLOD=2.3049;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,8:22:12.04:753,12,0	0/0:13,0:13:15.05:0,15,1222	0/0:24,0:17:15.05:0,15,544	0/0:26,0:19:18.06:0,18,612	0/0:16,0:17:13.87:0,14,653	0/0:12,0:13:9.03:0,9,758	0/0:21,0:22:34.36:0,34,2156	1/1:15,5:18:12:153,12,0	0/0:11,0:15:27.09:0,27,1351	0/0:19,0:19:33.09:0,33,1843	0/0:12,0:12:12.04:0,12,1248	0/0:12,0:17:27.09:0,27,1906	0/0:10,0:14:27.09:0,27,1681	0/0:13,0:15:18.06:0,18,1368	0/0:13,0:17:24.08:0,24,1293	0/0:9,0:10:24.07:0,24,2125	1/1:25,8:33:9.03:565,9,0	0/1:18,4:21:2.37:368,0,2	1/1:26,3:29:5.47:559,5,0	1/1:8,11:19:23.92:834,24,0	1/1:27,6:33:3.01:165,3,0	0/0:19,0:18:30.10:0,30,1845	0/0:13,0:17:9.03:0,9,613	0/0:18,0:30:45.15:0,45,3284	0/0:4,0:13:14.79:0,15,871	1/1:11,5:15:12.03:616,12,0	0/1:11,7:17:99:1067,0,197	0/1:2,0:2:17.98:18,0,168
chr10	108786578	.	TCTCCTC	T	8933.80	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=14.140;DP=596;FS=18.541;HRun=0;HaplotypeScore=145.0033;InbreedingCoeff=0.9579;MQ=63.38;MQ0=1;MQRankSum=-11.680;QD=26.99;ReadPosRankSum=-0.681;VQSLOD=3.4486;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,21:36:27.09:540,27,0	0/0:8,0:8:21.06:0,21,622	0/0:18,0:9:14.26:0,14,348	0/0:20,0:18:5.20:0,5,218	1/1:14,0:14:24.08:356,24,0	1/1:27,0:27:63.21:968,63,0	1/1:28,0:28:45.06:609,45,0	1/1:19,12:31:16.29:736,16,0	1/1:22,0:21:45.15:681,45,0	0/0:31,0:31:69.15:0,69,2049	0/0:7,0:7:15.05:0,15,499	0/0:20,0:21:48.11:0,48,1442	0/0:16,0:16:36.11:0,36,1119	0/0:24,0:24:54.19:0,54,1604	0/0:26,0:26:69.22:0,69,2146	0/0:28,0:28:60.21:0,60,1984	1/1:9,10:19:21.07:446,21,0	1/1:5,11:16:13.71:376,14,0	1/1:4,15:19:45.15:909,45,0	1/1:3,6:9:18.02:324,18,0	1/1:15,20:35:9.03:191,9,0	0/0:23,0:23:60.18:0,60,1916	0/0:12,0:12:30.10:0,30,991	0/0:31,0:31:51.14:0,51,1475	1/1:25,0:25:50.94:779,51,0	1/1:6,20:26:12.13:1065,12,0	1/1:3,9:12:27.09:573,27,0	1/1:4,8:12:18.06:382,18,0
chr10	108786602	.	CCTT	C	2326.51	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=15.211;DP=664;FS=5.243;HRun=0;HaplotypeScore=139.6317;InbreedingCoeff=0.8617;MQ=52.92;MQ0=6;MQRankSum=-12.040;QD=18.76;ReadPosRankSum=5.255;VQSLOD=3.3019;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:35.43:0,35,310	0/0:11,0:11:30.03:0,30,510	0/0:34,0:13:24.95:0,25,403	0/0:31,0:14:25.38:0,25,366	1/1:4,9:13:26.90:302,27,0	1/1:9,21:30:49.78:735,50,0	1/1:17,7:24:19.66:358,20,0	0/0:35,0:35:67:0,67,568	1/1:8,14:21:38.28:508,38,0	0/0:33,0:32:92.32:0,92,1594	0/0:13,0:13:35.26:0,35,476	0/0:21,0:21:45.84:0,46,1160	0/0:16,0:16:47.87:0,48,862	0/0:26,0:26:75.09:0,75,1312	0/0:26,0:26:78.19:0,78,1544	0/0:29,0:29:87.21:0,87,1604	0/0:19,0:19:14.81:0,15,177	0/0:19,0:19:16.69:0,17,196	0/0:21,0:19:2.51:0,3,77	0/1:8,0:8:2.62:3,0,44	0/0:38,0:38:27.06:0,27,335	0/0:27,0:27:81.02:0,81,1491	0/0:17,0:17:48.10:0,48,875	0/0:20,0:20:57.14:0,57,1074	1/1:10,17:27:43.04:595,43,0	0/0:30,0:29:7.60:0,8,241	0/0:21,0:21:22.76:0,23,263	0/0:18,0:18:23.08:0,23,200
chr10	108786605	.	T	TC	2724.42	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=5.721;DP=669;FS=2.297;HRun=5;HaplotypeScore=118.0185;InbreedingCoeff=0.9058;MQ=52.95;MQ0=6;MQRankSum=-7.564;QD=18.16;ReadPosRankSum=-0.518;VQSLOD=2.5036;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:65.56:0,66,639	0/0:13,0:13:35.99:0,36,346	0/1:35,0:14:5:5,0,251	0/0:32,0:16:28.96:0,29,279	1/1:11,4:15:35.64:306,36,0	1/1:22,7:29:86.78:811,87,0	1/1:10,12:23:56.69:573,57,0	0/0:37,0:37:88.20:0,88,839	1/1:15,6:20:56.77:513,57,0	0/0:32,0:31:87.19:0,87,929	0/0:14,0:14:38.82:0,39,412	0/0:21,0:21:60.15:0,60,644	0/0:16,0:16:45.11:0,45,483	0/0:26,0:26:66.15:0,66,709	0/0:26,0:26:69.17:0,69,741	0/0:29,0:29:84.21:0,84,897	0/0:20,0:20:48.10:0,48,496	0/0:19,0:19:14.30:0,14,345	0/0:22,0:20:47.47:0,47,470	0/0:8,0:8:15.97:0,16,149	0/0:37,0:37:65.62:0,66,581	0/0:27,0:27:81.20:0,81,870	0/0:17,0:17:48.12:0,48,515	0/0:20,0:20:51.10:0,51,538	1/1:18,8:27:77.41:692,77,0	0/0:30,0:29:81.05:0,81,806	0/0:21,0:21:63.07:0,63,628	0/0:21,0:21:48.11:0,48,502
chr10	108787372	.	CGTGTGTGT	C	1136.74	PASS	AB=0.957;AC=23;AF=0.500;AN=46;BaseQRankSum=1.888;DP=587;FS=5.888;HRun=0;HaplotypeScore=135.4382;InbreedingCoeff=0.4040;MQ=59.64;MQ0=29;MQRankSum=1.699;QD=4.19;ReadPosRankSum=0.862;VQSLOD=2.1522;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:9,0:8:5.99:0,6,92	./.	./.	1/1:25,0:26:0.47:1,0,0	./.	1/1:20,0:19:6.38:87,6,0	0/0:23,0:23:3.58:0,4,9	1/1:14,0:13:3.01:55,3,0	0/0:32,0:32:23.28:0,23,466	0/0:11,0:11:2.31:0,2,23	0/0:19,0:19:17.11:0,17,229	0/0:20,0:20:12.92:0,13,175	0/0:26,0:25:23.11:0,23,522	0/1:21,0:19:15.51:16,0,282	1/1:18,0:18:3.01:49,3,0	0/1:27,0:24:25.08:195,0,25	1/1:23,0:20:6.14:179,6,0	1/1:17,0:17:6.02:132,6,0	1/1:7,4:10:5.98:57,6,0	1/1:36,0:33:1.96:69,2,0	0/0:17,0:17:9.03:0,9,243	0/0:13,0:13:14.79:0,15,291	0/0:33,0:30:12.04:0,12,344	1/1:16,0:14:3.01:48,3,0	0/1:23,4:27:39.45:277,0,39	1/1:13,0:13:6.12:126,6,0	./.
chr10	108787428	.	TGAGAGAGAGAGAGAGAGAGAGA	T	97.02	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=2.979;DP=533;FS=3.627;HRun=0;HaplotypeScore=196.2403;InbreedingCoeff=0.4513;MQ=38.89;MQ0=75;MQRankSum=0.040;QD=1.70;ReadPosRankSum=-1.938;VQSLOD=2.4452;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:40:40.29:0,40,2212	0/0:7,0:7:11.25:0,11,582	./.	./.	0/0:13,0:17:2.16:0,2,56	0/0:21,0:21:19.78:0,20,948	0/0:19,0:22:4.26:0,4,147	0/0:8,0:8:21.07:0,21,1151	0/0:21,0:17:12.16:0,12,437	0/0:21,0:19:42.14:0,42,2596	0/0:4,0:6:6.02:0,6,375	1/1:15,4:16:3.01:173,3,0	0/0:10,3:13:0.47:0,0,1	0/0:20,4:22:3.07:0,3,12	0/0:16,8:21:0.47:0,0,1	0/0:9,0:9:1.41:0,1,4	0/0:27,0:25:37.61:0,38,1200	0/0:19,0:13:29.58:0,30,1226	0/0:13,0:15:36.12:0,36,2057	0/0:14,0:13:2.84:0,3,9	0/0:33,0:25:21.07:0,21,1279	1/1:16,4:18:0.89:2,1,0	1/1:10,5:15:0.89:2,1,0	0/0:32,1:26:3.01:0,3,201	0/0:21,0:18:21.07:0,21,1116	0/0:26,0:23:42.14:0,42,2396	0/0:19,0:16:31.80:0,32,1373	0/0:14,0:8:18.06:0,18,792
chr10	108788589	.	GGTGGTGGTGGTA	G	2559.28	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.557;DP=511;FS=0.000;HRun=0;HaplotypeScore=142.1831;InbreedingCoeff=0.9216;MQ=54.56;MQ0=18;MQRankSum=-7.201;QD=25.34;ReadPosRankSum=2.935;VQSLOD=2.8829;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:53.21:0,53,2433	0/0:7,0:6:18.05:0,18,469	0/0:20,0:11:17.56:0,18,308	0/0:13,0:11:29.93:0,30,751	1/1:1,6:7:5.98:127,6,0	1/1:2,18:19:27.09:962,27,0	1/1:3,35:37:24.08:689,24,0	0/0:19,0:19:43.30:0,43,1025	1/1:0,15:15:21.07:716,21,0	0/0:20,0:20:45.02:0,45,1425	0/0:8,0:8:14.98:0,15,450	0/0:19,0:19:48.50:0,49,2040	0/0:10,0:10:30.02:0,30,991	0/0:20,0:20:54.09:0,54,1884	0/0:13,0:13:39.11:0,39,1763	0/0:11,0:11:30.08:0,30,1262	0/0:22,0:22:63.17:0,63,2950	0/0:35,0:35:93.32:0,93,4063	0/0:16,0:12:29.98:0,30,795	0/0:9,0:8:18.05:0,18,740	0/0:65,0:58:99:0,138,5079	0/0:9,0:9:21.07:0,21,840	0/0:11,0:9:14.68:0,15,716	0/0:36,0:35:99:0,99,3634	1/1:3,18:20:6.02:227,6,0	0/0:16,0:15:39.12:0,39,1572	0/0:5,0:5:15.05:0,15,597	0/0:4,0:4:11.61:0,12,405
chr10	108789066	.	CGT	C	2885.78	PASS	AB=0.906;AC=34;AF=0.654;AN=52;BaseQRankSum=0.437;DP=703;FS=1.303;HRun=0;HaplotypeScore=105.7512;InbreedingCoeff=-0.0249;MQ=63.00;MQ0=17;MQRankSum=-0.207;QD=4.98;ReadPosRankSum=1.534;VQSLOD=3.0013;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,17:45:10.50:174,11,0	0/0:10,0:10:6.02:0,6,89	./.	./.	0/1:20,0:19:19.19:94,0,19	0/1:15,0:15:12.64:13,0,80	0/1:30,0:30:23.63:24,0,42	0/0:27,0:25:1.25:0,1,3	0/1:23,0:23:30.16:30,0,45	0/1:31,0:32:4.52:5,0,168	0/0:11,0:11:14.93:0,15,222	1/1:18,2:21:19.97:163,20,0	1/1:18,6:24:25.23:231,25,0	0/1:11,11:22:16.65:83,0,17	1/1:19,8:27:36.32:331,36,0	0/1:17,2:20:19.21:19,0,277	1/1:29,13:45:28.69:381,29,0	1/1:11,13:28:23.87:273,24,0	1/1:22,0:23:11.69:90,12,0	1/1:12,9:24:17.55:140,18,0	0/1:34,5:38:25.90:206,0,26	1/1:9,1:13:17.64:131,18,0	0/1:11,3:13:6.12:19,0,6	1/1:12,23:36:4.78:368,5,0	0/1:14,0:14:9.35:9,0,22	0/1:22,1:24:4.22:67,0,4	1/1:14,6:20:8.94:83,9,0	0/1:12,1:16:1.37:109,0,1
chr10	108789109	.	GTA	G	1505.50	PASS	AB=0.967;AC=18;AF=0.321;AN=56;BaseQRankSum=13.254;DP=691;FS=15.093;HRun=0;HaplotypeScore=117.3691;InbreedingCoeff=0.0404;MQ=56.51;MQ0=16;MQRankSum=-0.149;QD=4.03;ReadPosRankSum=1.669;VQSLOD=1.8980;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:26.76:0,27,374	0/0:8,0:8:20.99:0,21,229	0/0:34,0:14:11.24:0,11,305	0/0:40,0:20:27.78:0,28,377	1/1:18,1:19:14.13:179,14,0	0/1:19,4:22:26.84:233,0,27	1/1:37,1:38:19.65:457,20,0	0/0:26,0:24:47.18:0,47,488	0/1:9,1:10:19.30:73,0,19	0/0:23,0:23:29.57:0,30,524	0/0:17,0:17:23.03:0,23,474	0/1:18,0:17:92.73:93,0,124	0/1:17,0:17:87.76:88,0,118	0/1:23,0:23:0.07:0,0,164	0/1:27,1:28:78.40:78,0,269	0/0:15,0:15:20.06:0,20,418	0/1:36,1:37:85.47:85,0,230	0/1:32,0:32:22.28:22,0,262	0/1:12,0:10:41.85:42,0,86	0/0:24,0:24:24.07:0,24,273	0/1:39,0:38:91.63:92,0,385	0/0:23,0:23:16.76:0,17,361	0/0:21,0:20:28.17:0,28,322	0/1:42,0:42:75.08:75,0,278	1/1:15,1:16:11.13:156,11,0	0/0:18,0:18:14.35:0,14,236	0/1:18,2:20:3.40:3,0,221	0/0:24,0:21:30.19:0,30,289
chr10	108789193	.	CTG	C	4601.35	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.089;DP=754;FS=1.727;HRun=0;HaplotypeScore=94.3507;InbreedingCoeff=0.9995;MQ=87.85;MQ0=0;MQRankSum=-1.396;QD=34.08;ReadPosRankSum=3.729;VQSLOD=7.2431;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,2583	0/0:8,0:8:24.08:0,24,458	0/0:20,0:20:57.14:0,57,942	0/0:40,0:39:99:0,104,1830	1/1:0,27:27:66.12:935,66,0	1/1:0,25:25:69.23:1055,69,0	1/1:0,36:36:63.17:937,63,0	0/0:28,0:27:81.26:0,81,1446	1/1:1,18:19:48.04:713,48,0	0/0:23,0:23:69.22:0,69,1284	0/0:15,0:15:45.14:0,45,803	0/0:24,0:24:72.23:0,72,1326	0/0:20,0:20:57.18:0,57,1058	0/0:16,0:16:48.13:0,48,846	0/0:27,0:27:81.24:0,81,1474	0/0:18,0:18:54.19:0,54,1034	0/0:41,0:41:99:0,117,2112	0/0:35,0:35:96.29:0,96,1792	0/0:28,0:28:84.10:0,84,1373	0/0:18,0:18:54.17:0,54,990	0/0:51,0:51:99:0,150,2774	0/0:27,0:27:72.19:0,72,1242	0/0:21,0:21:60.18:0,60,1052	0/0:48,0:48:99:0,141,2608	1/1:0,28:28:62.91:962,63,0	0/0:23,0:23:69.21:0,69,1203	0/0:21,0:21:63.17:0,63,1126	0/0:18,0:18:48.14:0,48,853
chr10	108789320	.	G	GT	8729.40	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-17.095;DP=646;FS=1.355;HRun=5;HaplotypeScore=83.3263;InbreedingCoeff=0.9986;MQ=80.80;MQ0=0;MQRankSum=-2.407;QD=34.50;ReadPosRankSum=1.472;VQSLOD=5.0473;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,43:45:99:1641,126,0	0/0:10,0:10:27.07:0,27,290	0/0:25,0:26:64.90:0,65,646	0/0:26,0:25:63.10:0,63,649	0/0:21,0:21:36.09:0,36,387	0/0:26,0:26:72.18:0,72,774	0/0:29,0:29:78.14:0,78,818	1/1:2,27:29:78.22:983,78,0	0/0:16,0:16:45.11:0,45,477	0/0:26,0:26:75.19:0,75,806	0/0:21,0:21:63.15:0,63,671	0/0:20,0:20:42:0,42,451	0/0:17,0:17:48.12:0,48,516	0/0:26,0:26:75.15:0,75,788	0/0:19,0:19:48.12:0,48,516	0/0:21,0:21:57.14:0,57,613	1/1:3,26:28:75.24:981,75,0	1/1:0,29:29:84.27:1105,84,0	1/1:2,15:18:48.16:627,48,0	1/1:3,17:20:51.17:671,51,0	1/1:4,28:32:75.24:987,75,0	0/0:26,0:26:75.17:0,75,797	0/0:16,0:16:48.11:0,48,508	0/0:29,0:29:81.19:0,81,863	0/0:18,0:18:39.03:0,39,396	1/1:3,18:21:54.18:710,54,0	1/1:2,21:23:60.20:789,60,0	1/1:2,5:7:18.06:234,18,0
chr10	108789567	.	TTCC	T	3829.53	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.559;DP=630;FS=6.473;HRun=0;HaplotypeScore=88.5691;InbreedingCoeff=0.9988;MQ=70.55;MQ0=1;MQRankSum=-5.619;QD=39.89;ReadPosRankSum=3.104;VQSLOD=4.6545;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.30:0,90,1906	0/0:12,0:12:36.11:0,36,773	0/0:28,0:17:30.60:0,31,741	0/0:23,0:18:22.24:0,22,576	1/1:1,25:26:75.19:1160,75,0	1/1:0,19:19:39.13:638,39,0	1/1:0,12:12:27.09:441,27,0	0/0:41,0:41:99:0,105,1951	1/1:0,15:15:30.10:518,30,0	0/0:25,0:25:75.24:0,75,1456	0/0:15,0:15:45.15:0,45,932	0/0:16,0:16:48.16:0,48,1049	0/0:18,0:18:54.16:0,54,1090	0/0:25,0:25:75.24:0,75,1561	0/0:25,0:25:75.24:0,75,1549	0/0:17,0:17:51.17:0,51,1094	0/0:22,0:22:66.22:0,66,1358	0/0:21,0:21:54.18:0,54,1075	0/0:17,0:17:51.14:0,51,962	0/0:31,0:31:93.29:0,93,1881	0/0:17,0:17:48.16:0,48,1049	0/0:22,0:22:66.22:0,66,1411	0/0:18,0:18:54.18:0,54,1132	0/0:14,0:14:42.11:0,42,757	1/1:0,24:24:63.22:1073,63,0	0/0:30,0:30:90.31:0,90,1959	0/0:36,0:36:99:0,105,2162	0/0:31,0:31:52.81:0,53,1637
chr10	108789702	.	C	CTCACA	5785.16	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.882;DP=731;FS=8.671;HRun=0;HaplotypeScore=143.4518;InbreedingCoeff=0.9994;MQ=83.35;MQ0=1;MQRankSum=-12.439;QD=69.70;ReadPosRankSum=-0.958;VQSLOD=5.5509;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,3279	0/0:12,0:12:36.12:0,36,786	0/0:27,0:27:71.83:0,72,1444	0/0:18,0:18:45.15:0,45,1030	1/1:2,13:18:39.13:1234,39,0	1/1:3,13:16:33.11:1092,33,0	1/1:1,8:11:24.08:735,24,0	0/0:42,0:42:99:0,126,2801	1/1:2,15:17:36.12:1135,36,0	0/0:35,0:35:96.33:0,96,2166	0/0:23,0:23:66.23:0,66,1464	0/0:19,0:19:57.20:0,57,1328	0/0:26,0:26:78.27:0,78,1816	0/0:24,0:24:72.20:0,72,1620	0/0:23,0:23:69.23:0,69,1490	0/0:24,0:24:66.23:0,66,1486	0/0:34,0:34:99:0,102,2375	0/0:22,0:21:60.20:0,60,1320	0/0:16,0:16:48.16:0,48,1046	0/0:20,0:20:60.16:0,60,1321	0/0:47,0:47:99:0,141,3228	0/0:23,0:23:69.24:0,69,1512	0/0:25,0:25:72.25:0,72,1655	0/0:39,0:39:99:0,114,2611	1/1:6,15:21:48.16:1589,48,0	0/0:38,0:38:99:0,114,2489	0/0:47,0:47:99:0,135,3058	0/0:16,0:16:48.16:0,48,1118
chr10	108790350	.	C	CT	4108.72	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.133;DP=682;FS=1.302;HRun=3;HaplotypeScore=72.6256;InbreedingCoeff=0.9989;MQ=86.13;MQ0=0;MQRankSum=-1.881;QD=37.69;ReadPosRankSum=0.529;VQSLOD=3.9692;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,1714	0/0:7,0:7:21.06:0,21,252	0/0:25,0:25:66.08:0,66,749	0/0:20,0:20:48.14:0,48,564	1/1:0,21:22:60.20:837,60,0	1/1:2,19:21:54.18:752,54,0	1/1:1,23:24:63.21:881,63,0	0/0:31,0:31:81.20:0,81,930	1/1:1,23:24:63.21:882,63,0	0/0:32,0:32:93.29:0,93,1115	0/0:19,0:19:57.16:0,57,672	0/0:22,0:22:54.15:0,54,636	0/0:26,0:26:78.24:0,78,936	0/0:28,0:28:81.24:0,81,960	0/0:30,0:30:87.23:0,87,1020	0/0:25,0:25:69.21:0,69,828	0/0:38,0:38:99:0,111,1331	0/0:10,0:10:30.09:0,30,360	0/0:23,0:23:63.19:0,63,755	0/0:21,0:21:60.18:0,60,719	0/0:31,0:31:93.29:0,93,1116	0/0:26,0:26:75.23:0,75,900	0/0:24,0:24:69.21:0,69,827	0/0:21,0:21:63.19:0,63,755	1/1:0,18:18:54.18:756,54,0	0/0:29,0:29:81.23:0,81,951	0/0:22,0:22:66.19:0,66,780	0/0:13,0:13:39.12:0,39,468
chr10	108790797	.	TACAC	T	2741.11	PASS	AB=0.882;AC=23;AF=0.442;AN=52;BaseQRankSum=-2.065;DP=638;FS=0.631;HRun=0;HaplotypeScore=165.1965;InbreedingCoeff=-0.0239;MQ=56.10;MQ0=12;MQRankSum=2.036;QD=6.53;ReadPosRankSum=1.542;VQSLOD=2.8939;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,5:35:17.56:262,0,18	0/0:14,0:14:30.10:0,30,663	./.	./.	0/1:16,0:19:15.22:77,0,15	0/0:17,0:16:5.27:0,5,21	0/1:16,0:16:6.50:14,0,7	0/0:30,0:29:1.76:0,2,35	0/0:16,0:16:4.50:0,4,21	0/0:28,0:29:36.68:0,37,680	0/0:19,0:19:5.48:0,5,378	0/1:15,0:16:74.19:74,0,80	0/1:17,0:20:37.25:44,0,37	0/1:20,0:22:6.46:6,0,39	0/1:20,5:26:9.72:88,0,10	0/0:22,0:22:29.81:0,30,450	1/1:21,2:22:11.37:205,11,0	0/1:21,4:26:2.59:385,0,3	1/1:15,3:18:12.03:153,12,0	1/1:13,7:20:15.01:206,15,0	0/1:44,3:48:99:337,0,132	0/1:14,0:17:3.87:4,0,105	0/1:15,0:15:11.21:28,0,11	0/1:28,0:28:58.17:58,0,137	0/0:20,0:21:11.99:0,12,124	0/1:18,14:33:99:382,0,137	1/1:12,5:17:7.14:221,7,0	1/1:8,5:12:24.08:362,24,0
chr10	108790840	.	ACACT	A	1576.23	PASS	AB=0.987;AC=21;AF=0.404;AN=52;BaseQRankSum=5.954;DP=820;FS=45.829;HRun=0;HaplotypeScore=198.8774;InbreedingCoeff=-0.4551;MQ=43.59;MQ0=44;MQRankSum=1.192;QD=2.53;ReadPosRankSum=2.843;VQSLOD=1.3423;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:44,1:43:99:167,0,195	0/0:18,0:18:53.71:0,54,859	./.	./.	1/1:36,0:35:5.85:53,6,0	0/1:26,0:25:1.42:7,0,1	0/1:34,0:22:30.48:37,0,30	0/0:33,0:21:50.78:0,51,422	0/1:25,0:24:5.41:7,0,5	0/0:36,0:34:67.81:0,68,943	0/1:17,0:16:11.99:12,0,536	0/1:25,0:23:85:85,0,114	0/1:25,0:24:37.34:37,0,120	0/0:41,0:37:15.27:0,15,218	0/1:29,1:29:49.95:50,0,279	0/0:27,0:26:22.87:0,23,533	0/1:28,0:25:99:113,0,221	0/1:46,0:46:99:196,0,327	0/1:16,0:15:99:106,0,172	0/1:22,1:22:49.78:50,0,182	0/1:94,0:89:99:142,0,914	0/1:22,0:22:2.47:2,0,86	0/1:17,0:16:13.99:14,0,111	0/1:42,0:40:7.14:7,0,323	0/0:32,0:29:2.02:0,2,38	0/1:30,0:27:99:273,0,302	0/1:12,1:13:99:115,0,116	0/1:21,2:20:99:251,0,144
chr10	108790842	.	ACT	A	358.78	PASS	AB=0.992;AC=23;AF=0.442;AN=52;BaseQRankSum=6.286;DP=836;FS=47.076;HRun=0;HaplotypeScore=186.2405;InbreedingCoeff=-0.2850;MQ=43.53;MQ0=44;MQRankSum=-1.492;QD=0.61;ReadPosRankSum=-1.445;VQSLOD=1.2854;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:41:2.97:3,0,293	0/0:18,0:18:53.74:0,54,672	./.	./.	1/1:38,0:36:11.28:69,11,0	1/1:28,0:25:1.12:23,1,0	0/1:37,0:24:14.23:34,0,14	0/0:32,0:21:49.86:0,50,423	1/1:25,0:24:1.32:25,1,0	0/0:38,0:36:51.89:0,52,691	0/1:18,0:17:17.34:17,0,422	0/1:25,0:23:77.13:85,0,77	0/1:23,0:22:61.68:62,0,110	0/1:42,1:39:1.17:1,0,203	0/1:30,0:29:9.33:9,0,266	0/1:27,1:27:10.13:10,0,417	0/0:28,0:25:14.28:0,14,278	0/1:46,0:46:21.14:21,0,418	0/1:16,0:15:7.47:7,0,184	0/0:24,0:23:32.16:0,32,268	0/0:99,0:93:39.92:0,40,991	0/1:22,0:22:24.17:24,0,69	0/1:17,0:16:8.72:9,0,110	0/1:44,2:44:5.99:6,0,314	0/1:30,0:27:7.44:10,0,7	0/1:31,1:28:61.67:62,0,308	0/1:13,0:13:3.51:4,0,147	0/1:25,0:22:25.76:26,0,211
chr10	108790853	.	CACACTCACAT	C	52.34	PASS	AB=0.977;AC=6;AF=0.107;AN=56;BaseQRankSum=7.027;DP=847;FS=18.317;HRun=0;HaplotypeScore=239.7861;InbreedingCoeff=0.1753;MQ=43.67;MQ0=41;MQRankSum=-1.084;QD=0.38;ReadPosRankSum=-2.820;VQSLOD=0.9887;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:45:54.52:0,55,2116	0/0:20,0:20:57.17:0,57,1609	0/0:7,0:1:3.01:0,3,59	0/0:9,0:1:2.98:0,3,21	0/1:36,1:35:0:0,0,0	1/1:22,3:23:4.47:22,4,0	0/0:35,0:23:3.01:0,3,76	0/0:36,0:23:66.20:0,66,1360	0/1:26,2:25:22.76:23,0,198	0/0:38,0:36:95.25:0,95,2479	0/0:18,0:18:31.20:0,31,1331	0/1:26,0:24:52.16:52,0,202	0/1:22,0:21:65.60:66,0,249	0/0:41,0:38:15.49:0,15,449	0/0:28,0:27:39.87:0,40,593	0/0:25,0:24:54.13:0,54,1562	0/0:31,0:28:64.69:0,65,1925	0/0:44,0:44:99:0,102,2845	0/0:17,0:13:35.61:0,36,900	0/0:24,0:23:38.82:0,39,1223	0/0:108,0:102:99:0,156,5678	0/0:21,0:21:0.46:0,0,131	0/0:14,0:13:17.85:0,18,283	0/0:47,0:45:27.58:0,28,683	0/0:31,1:29:4.76:0,5,105	0/0:29,0:25:49.40:0,49,1646	0/0:14,0:14:29.46:0,29,880	0/0:24,0:24:57.07:0,57,1744
chr10	108790859	.	CACAT	C	3026.95	PASS	AB=0.573;AC=11;AF=0.204;AN=54;BaseQRankSum=7.104;DP=850;FS=0.467;HRun=0;HaplotypeScore=167.7734;InbreedingCoeff=0.4837;MQ=44.63;MQ0=38;MQRankSum=2.439;QD=15.13;ReadPosRankSum=2.816;VQSLOD=3.2221;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:45:61.28:0,61,2059	0/0:18,0:18:54.06:0,54,1318	0/0:7,0:1:3.01:0,3,80	0/0:12,0:1:2.74:0,3,12	./.	0/0:23,0:21:2.50:0,2,9	0/0:31,0:21:4.83:0,5,86	0/0:37,0:24:63.18:0,63,1494	0/0:28,0:25:0.48:0,0,155	0/0:39,0:37:80.74:0,81,2183	0/0:20,0:20:37.20:0,37,1235	0/1:9,19:26:11.58:266,0,12	1/1:6,17:22:25.01:417,25,0	1/1:12,27:36:22.06:612,22,0	1/1:5,22:26:39.02:711,39,0	0/0:27,0:26:60.10:0,60,1444	0/0:33,0:31:63.81:0,64,1830	0/0:43,0:43:61.63:0,62,2338	0/0:18,0:13:38.10:0,38,899	0/0:24,0:23:41.94:0,42,976	0/0:111,0:105:99:0,193,5275	1/1:7,14:21:4.74:164,5,0	0/1:3,11:13:65.66:213,0,66	0/1:11,37:47:16.81:803,0,17	0/0:29,0:26:6.02:0,6,100	0/0:33,0:28:50.33:0,50,1460	0/0:11,0:11:30.10:0,30,734	0/0:25,0:25:41.72:0,42,1428
chr10	108790861	.	CAT	C	817.95	PASS	AB=1.000;AC=12;AF=0.222;AN=54;BaseQRankSum=9.738;DP=855;FS=0.000;HRun=0;HaplotypeScore=156.5073;InbreedingCoeff=0.6212;MQ=44.86;MQ0=34;MQRankSum=1.158;QD=4.17;ReadPosRankSum=2.333;VQSLOD=2.4356;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:46:68.06:0,68,1523	0/0:18,0:18:54.06:0,54,952	0/0:8,0:1:3.01:0,3,58	0/0:15,0:1:2.74:0,3,12	./.	0/0:21,0:19:2.09:0,2,6	0/0:31,0:21:0.87:0,1,55	0/0:35,0:24:69.12:0,69,1147	0/0:28,0:25:11.55:0,12,149	0/0:39,0:37:34.21:0,34,1493	0/0:20,0:20:35.34:0,35,888	0/1:27,0:25:21.38:89,0,21	1/1:21,2:22:16.30:132,16,0	1/1:38,0:36:19.75:182,20,0	1/1:26,1:26:38.30:239,38,0	0/0:26,0:25:60:0,60,1055	0/0:34,0:32:66.06:0,66,1381	0/0:43,1:44:72.42:0,72,1712	0/0:19,1:15:31.37:0,31,696	0/0:23,0:23:42.05:0,42,696	0/0:117,0:111:99:0,198,3936	1/1:20,0:20:8.48:53,8,0	0/1:13,0:12:42.76:57,0,43	1/1:48,0:47:15.61:235,16,0	0/0:29,0:26:5.81:0,6,69	0/0:31,0:26:50.21:0,50,1089	0/0:12,0:12:33.05:0,33,577	0/0:26,0:26:36.75:0,37,1067
chr10	108790894	.	ACACT	A	61.44	PASS	AB=0.627;AC=7;AF=0.125;AN=56;BaseQRankSum=5.396;DP=903;FS=1.170;HRun=0;HaplotypeScore=167.6573;InbreedingCoeff=0.7282;MQ=47.96;MQ0=28;MQRankSum=-3.736;QD=0.58;ReadPosRankSum=-3.450;VQSLOD=2.0210;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:53:99:0,133,3177	0/0:13,0:13:39.12:0,39,930	0/0:26,0:4:12.01:0,12,177	0/0:22,0:7:14.83:0,15,336	0/1:13,19:32:0.19:0,0,0	1/1:11,8:17:2.79:36,3,0	0/0:15,3:11:0.35:0,0,1	0/0:55,0:46:99:0,120,2803	1/1:14,15:27:5.15:85,5,0	0/0:32,0:31:74.24:0,74,1928	0/0:18,0:18:54.17:0,54,1354	0/0:29,0:29:44.47:0,44,1143	0/0:27,0:27:47:0,47,1129	0/0:44,0:43:72.17:0,72,1843	0/0:31,0:31:75.26:0,75,1954	0/0:31,0:31:84.27:0,84,2147	0/0:40,0:39:93.31:0,93,2402	0/0:40,0:40:79.86:0,80,2256	0/0:26,0:19:51.06:0,51,1138	0/0:18,0:18:45:0,45,1158	0/0:122,0:117:99:0,164,5538	0/0:16,0:16:27.09:0,27,724	0/0:18,0:18:39.01:0,39,1008	0/0:51,0:51:66.18:0,66,1686	1/1:18,8:23:3.01:49,3,0	0/0:28,0:27:75.25:0,75,1909	0/0:16,0:16:48.16:0,48,1216	0/0:21,0:21:40.14:0,40,1164
chr10	108790896	.	ACT	A	39.43	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=5.888;DP=899;FS=2.332;HRun=0;HaplotypeScore=140.0346;InbreedingCoeff=0.7371;MQ=48.36;MQ0=28;MQRankSum=-4.301;QD=0.39;ReadPosRankSum=-3.888;VQSLOD=1.5394;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:53:99:0,133,2305	0/0:14,0:14:42.07:0,42,715	0/0:25,1:4:12:0,12,146	0/0:23,0:8:17.82:0,18,279	0/1:31,0:31:0.10:0,0,0	1/1:15,3:17:2.90:41,3,0	0/0:18,0:11:0.69:0,1,2	0/0:57,0:48:99:0,126,2164	1/1:25,2:25:6.71:92,7,0	0/0:32,0:31:74.25:0,74,1416	0/0:18,0:18:53.76:0,54,959	0/0:29,0:29:47.33:0,47,853	0/0:26,0:26:47.25:0,47,810	0/0:41,0:41:74.45:0,74,1356	0/0:32,0:32:78.24:0,78,1421	0/0:30,0:30:84.26:0,84,1546	0/0:37,0:36:86.44:0,86,1736	0/0:40,0:40:82.85:0,83,1679	0/0:25,0:18:51.06:0,51,865	0/0:18,0:18:45.14:0,45,835	0/0:122,0:117:99:0,166,4035	0/0:16,0:16:27.09:0,27,520	0/0:19,0:19:42:0,42,741	0/0:53,0:53:72.17:0,72,1271	1/1:25,0:22:2.74:14,3,0	0/0:29,0:28:78.22:0,78,1419	0/0:17,0:16:51.11:0,51,888	0/0:21,0:21:40.14:0,40,841
chr10	108790908	.	ACT	A	39.53	PASS	AB=0.927;AC=7;AF=0.125;AN=56;BaseQRankSum=4.120;DP=874;FS=0.000;HRun=0;HaplotypeScore=141.2651;InbreedingCoeff=0.6283;MQ=52.13;MQ0=15;MQRankSum=-2.480;QD=0.41;ReadPosRankSum=-2.775;VQSLOD=1.6526;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:52:99:0,135,2474	0/0:13,0:13:39.07:0,39,639	0/0:25,1:9:16.45:0,16,255	0/0:25,0:13:29.75:0,30,367	0/1:24,1:25:0.10:0,0,0	1/1:14,0:13:1.56:38,2,0	0/1:14,4:13:0.57:11,0,1	0/0:55,0:50:99:0,135,2319	1/1:23,0:22:0.93:86,1,0	0/0:29,0:29:81.16:0,81,1376	0/0:18,0:18:54.14:0,54,981	0/0:31,0:31:56.38:0,56,979	0/0:23,0:23:34.06:0,34,819	0/0:37,0:37:83.82:0,84,1514	0/0:38,0:38:96.26:0,96,1676	0/0:31,0:31:90.16:0,90,1651	0/0:38,0:37:93.27:0,93,1697	0/0:35,0:35:96.09:0,96,1717	0/0:21,0:17:50.73:0,51,851	0/0:19,0:19:45.13:0,45,821	0/0:122,0:118:99:0,208,4132	0/0:19,0:19:36.09:0,36,589	0/0:20,0:20:45.03:0,45,833	0/0:54,0:54:87.23:0,87,1518	0/1:16,0:16:1.04:9,0,1	0/0:30,0:30:84.19:0,84,1485	0/0:18,0:17:51.12:0,51,903	0/0:21,0:21:54.09:0,54,839
chr10	108790916	.	A	ACT	213.55	PASS	AB=0.551;AC=8;AF=0.143;AN=56;BaseQRankSum=5.018;DP=886;FS=3.121;HRun=0;HaplotypeScore=159.4810;InbreedingCoeff=0.8145;MQ=53.33;MQ0=14;MQRankSum=-4.797;QD=2.45;ReadPosRankSum=-1.783;VQSLOD=1.9063;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:54:99:0,138,2065	0/0:10,0:10:30.10:0,30,457	0/0:32,0:16:37.55:0,38,576	0/0:28,0:18:36.05:0,36,488	0/1:7,19:26:0.21:0,0,0	1/1:6,8:13:9.40:126,9,0	1/1:6,7:13:2.97:53,3,0	0/0:53,0:48:99:0,123,1807	1/1:5,18:22:10.86:154,11,0	0/0:26,0:26:75.25:0,75,1131	0/0:20,0:20:60.19:0,60,896	0/0:35,0:35:72.04:0,72,1031	0/0:27,0:27:58.06:0,58,852	0/0:36,0:36:84.14:0,84,1241	0/0:40,0:40:99:0,105,1585	0/0:34,0:34:99:0,99,1473	0/0:36,0:35:84.27:0,84,1256	0/0:36,0:36:96.31:0,96,1443	0/0:26,0:22:60.14:0,60,849	0/0:22,0:22:48.16:0,48,726	0/0:117,0:113:99:0,225,3336	0/0:19,0:19:42.12:0,42,610	0/0:20,0:20:48.16:0,48,732	0/0:57,0:57:99:0,102,1517	0/1:1,10:11:0.10:0,0,0	0/0:31,0:31:90.28:0,90,1321	0/0:20,0:19:48.15:0,48,713	0/0:18,0:18:51.15:0,51,756
chr10	108790952	.	T	TCA	447.73	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=6.928;DP=927;FS=1.755;HRun=0;HaplotypeScore=221.0456;InbreedingCoeff=0.8863;MQ=60.09;MQ0=5;MQRankSum=-5.012;QD=4.76;ReadPosRankSum=-0.376;VQSLOD=3.1624;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:60:99:0,147,2130	0/0:7,0:7:21.07:0,21,304	0/0:44,0:30:45.94:0,46,823	0/0:58,0:43:92.94:0,93,1328	1/1:26,0:26:2.84:31,3,0	1/1:12,0:12:11.83:144,12,0	1/1:23,0:23:24.15:272,24,0	0/0:39,0:37:99:0,105,1534	1/1:22,0:21:11.62:144,12,0	0/0:28,0:27:72.10:0,72,992	0/0:16,0:16:48.12:0,48,662	0/0:39,1:40:92.43:0,92,1363	0/0:24,0:24:66.22:0,66,963	0/0:32,0:32:81.18:0,81,1150	0/0:36,0:36:96.31:0,96,1391	0/0:42,0:42:99:0,114,1649	0/0:39,1:39:47.13:0,47,1286	0/0:35,2:37:34.18:0,34,1169	0/0:32,0:32:87.28:0,87,1244	0/0:22,0:22:54.17:0,54,767	0/0:105,3:108:99:0,223,3071	0/0:22,0:22:57.19:0,57,831	0/0:22,0:21:60.20:0,60,873	0/0:53,1:54:99:0,108,1504	0/1:11,0:11:0.10:0,0,0	0/0:28,0:28:84.19:0,84,1183	0/0:20,0:19:60.20:0,60,864	0/0:15,0:16:38.70:0,39,514
chr10	108790953	.	C	CAT	779.35	PASS	AB=0.560;AC=9;AF=0.161;AN=56;BaseQRankSum=6.143;DP=936;FS=4.127;HRun=0;HaplotypeScore=226.7417;InbreedingCoeff=0.8894;MQ=59.83;MQ0=5;MQRankSum=-4.550;QD=7.57;ReadPosRankSum=-0.433;VQSLOD=3.0101;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:59:99:0,150,2050	0/0:7,0:7:21.07:0,21,301	0/0:46,0:30:71.07:0,71,851	0/0:60,0:43:62.07:0,62,1109	1/1:7,21:28:2.74:55,3,0	1/1:3,10:13:14.75:220,15,0	1/1:3,21:24:24.15:433,24,0	0/0:40,0:38:99:0,105,1408	1/1:4,20:23:11.63:216,12,0	0/0:27,0:26:75.25:0,75,1054	0/0:16,0:16:42.12:0,42,582	0/0:41,0:41:95.04:0,95,1318	0/0:25,0:25:66.22:0,66,943	0/0:33,0:33:82.37:0,82,1134	0/0:35,0:35:96.31:0,96,1356	0/0:42,0:42:99:0,114,1595	0/0:40,0:39:63.93:0,64,1216	0/0:37,0:37:54.19:0,54,1186	0/0:32,0:32:87.24:0,87,1162	0/0:22,0:22:54.13:0,54,714	0/0:106,0:106:99:0,213,2848	0/0:23,0:23:57.19:0,57,816	0/0:22,0:21:60.19:0,60,841	0/0:54,0:54:99:0,108,1533	0/1:3,11:14:0.22:0,0,0	0/0:28,0:28:78.24:0,78,1085	0/0:20,0:19:60.17:0,60,819	0/0:16,0:16:38.82:0,39,485
chr10	108790985	.	TAC	T	9117.62	PASS	AB=0.766;AC=30;AF=0.536;AN=56;BaseQRankSum=15.934;DP=955;FS=2.193;HRun=0;HaplotypeScore=208.8277;InbreedingCoeff=0.8764;MQ=54.95;MQ0=13;MQRankSum=-1.911;QD=17.67;ReadPosRankSum=1.157;VQSLOD=4.5242;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,46:59:99:1314,106,0	0/0:13,0:13:30.09:0,30,471	0/0:67,0:28:30.08:0,30,464	0/0:60,0:22:26.30:0,26,459	0/1:4,12:16:0.32:0,0,0	1/1:3,6:9:8.60:83,9,0	1/1:15,13:24:6.04:59,6,0	1/1:15,28:40:75.22:928,75,0	1/1:1,17:18:17.64:229,18,0	0/0:28,0:28:67.25:0,67,1161	0/0:16,0:16:45.12:0,45,704	0/0:33,0:33:76.48:0,76,1217	0/0:27,0:27:68.94:0,69,1059	0/0:35,1:35:25.03:0,25,944	0/0:38,0:38:81.23:0,81,1300	0/0:35,0:35:90.29:0,90,1446	1/1:6,31:37:49.05:840,49,0	1/1:9,27:36:12.46:697,12,0	1/1:8,18:24:51.15:625,51,0	1/1:1,17:19:38.86:471,39,0	1/1:20,98:116:99:2113,146,0	0/1:23,1:24:10.08:10,0,936	0/0:26,0:26:58.08:0,58,951	0/0:59,0:59:99:0,126,2039	1/1:5,16:21:17.82:202,18,0	1/1:6,20:26:12.95:681,13,0	1/1:4,15:18:33.11:420,33,0	1/1:2,13:16:29.91:447,30,0
chr10	108790997	.	CAG	C	2610.51	PASS	AB=0.995;AC=17;AF=0.304;AN=56;BaseQRankSum=19.439;DP=978;FS=2.880;HRun=0;HaplotypeScore=227.2850;InbreedingCoeff=0.1015;MQ=51.65;MQ0=22;MQRankSum=-0.581;QD=5.31;ReadPosRankSum=6.718;VQSLOD=2.7770;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:53,0:53:31.49:409,31,0	0/0:12,0:12:31.92:0,32,556	0/0:67,0:13:30.05:0,30,471	0/0:64,0:16:32.38:0,32,529	0/0:17,0:17:8.65:0,9,72	0/1:15,0:15:32.24:57,0,32	0/1:24,0:20:12.52:13,0,41	0/1:44,0:40:99:209,0,214	0/1:21,0:21:4.61:101,0,5	0/0:34,0:34:98.64:0,99,1500	0/0:15,0:15:45.14:0,45,821	0/0:33,1:34:77.91:0,78,1446	0/0:28,0:28:72.21:0,72,1253	0/0:34,0:33:50.60:0,51,1082	0/0:37,0:37:90.25:0,90,1600	0/0:37,0:37:95.68:0,96,1682	1/1:39,1:39:15.79:308,16,0	0/1:35,2:37:47.95:273,0,48	0/1:22,0:20:11.13:157,0,11	0/1:24,0:24:50.53:124,0,51	0/1:125,0:123:99:589,0,112	0/0:27,0:27:47.49:0,47,1192	0/0:23,0:23:69.18:0,69,1196	0/0:56,0:56:99:0,141,2281	0/1:25,0:25:31.32:56,0,31	0/1:26,0:26:99:194,0,105	0/1:19,0:19:49.21:135,0,49	1/1:16,0:16:27.88:163,28,0
chr10	108791012	.	GCA	G	1216.59	PASS	AB=0.952;AC=13;AF=0.232;AN=56;BaseQRankSum=3.891;DP=982;FS=24.446;HRun=0;HaplotypeScore=228.1112;InbreedingCoeff=0.6404;MQ=51.18;MQ0=30;MQRankSum=-1.204;QD=4.68;ReadPosRankSum=-1.297;VQSLOD=1.1754;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,111,1784	0/0:12,0:12:30.10:0,30,487	0/1:76,1:15:11.02:11,0,332	0/0:62,0:18:35.03:0,35,532	1/1:1,15:16:8.82:110,9,0	1/1:3,16:19:20.85:256,21,0	1/1:11,12:20:20.49:234,20,0	0/0:53,0:49:99:0,102,1565	1/1:3,19:23:26.66:329,27,0	0/0:36,3:38:10.16:0,10,1399	0/0:15,0:15:42.14:0,42,668	0/1:31,3:34:40.35:40,0,858	0/0:26,1:27:23.52:0,24,854	0/0:32,1:33:27.60:0,28,845	0/0:32,1:33:6.76:0,7,888	0/0:32,2:34:27.41:0,27,914	0/0:37,1:38:26.36:0,26,846	0/1:35,2:37:10.37:10,0,742	0/0:19,0:18:36.12:0,36,576	0/0:21,2:23:2.35:0,2,544	0/0:112,1:111:99:0,205,3177	0/0:23,1:24:14.50:0,14,741	0/0:24,1:25:29.55:0,30,983	0/0:48,2:50:34.94:0,35,1488	1/1:4,24:29:32.87:404,33,0	0/0:28,1:28:32.55:0,33,956	0/0:18,0:19:36.11:0,36,550	0/0:16,0:16:21.07:0,21,312
chr10	108791326	.	ACCCAGGGCATGGTGGCCTGCACTTTT	A	6305.55	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.311;DP=621;FS=3.322;HRun=0;HaplotypeScore=390.7666;InbreedingCoeff=0.9558;MQ=90.59;MQ0=0;MQRankSum=-8.455;QD=140.12;ReadPosRankSum=3.099;VQSLOD=3.9300;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.25:0,81,7788	0/0:8,0:8:24.08:0,24,2504	0/0:33,0:33:94.14:0,94,5871	0/0:21,0:20:60.15:0,60,3108	1/1:0,7:7:9.03:462,9,0	1/1:0,2:2:6.02:433,6,0	1/1:0,11:11:21.07:1515,21,0	0/0:23,0:23:69.24:0,69,5457	1/1:0,16:16:39.13:2814,39,0	0/0:17,0:17:51.15:0,51,3738	0/0:19,0:19:57.20:0,57,5697	0/0:25,0:25:75.26:0,75,7811	0/0:19,0:19:54.19:0,54,5950	0/0:29,0:29:81.22:0,81,8770	0/0:32,0:32:93.32:0,93,10865	0/0:20,0:20:60.21:0,60,6852	0/0:32,0:32:96.33:0,96,8920	0/0:21,0:21:57.20:0,57,5416	0/0:16,0:16:48.16:0,48,4303	0/0:15,0:15:45.15:0,45,4812	0/0:62,0:62:99:0,187,19169	0/0:22,0:22:66.23:0,66,6930	0/0:20,0:20:60.21:0,60,5325	0/0:41,0:41:99:0,120,12910	1/1:0,9:9:15.05:1081,15,0	0/0:30,0:30:87.28:0,87,8253	0/0:29,0:29:87.30:0,87,9055	0/0:15,0:15:45.15:0,45,3496
chr10	108791451	.	AAC	A	1236.81	PASS	AB=0.946;AC=11;AF=0.196;AN=56;BaseQRankSum=5.702;DP=652;FS=4.424;HRun=0;HaplotypeScore=134.6435;InbreedingCoeff=0.8562;MQ=65.48;MQ0=8;MQRankSum=-1.566;QD=7.73;ReadPosRankSum=0.312;VQSLOD=3.4267;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,1:43:52.70:0,53,1311	0/0:6,0:6:15.05:0,15,246	0/1:32,2:20:13.19:13,0,252	0/0:40,0:22:27.36:0,27,450	1/1:5,20:24:24.07:298,24,0	1/1:4,13:15:18.05:223,18,0	1/1:10,26:36:36.07:429,36,0	0/0:20,0:20:39.12:0,39,611	1/1:3,22:23:26.97:283,27,0	0/0:22,0:22:48.16:0,48,765	0/0:11,0:11:20.95:0,21,285	0/0:25,1:26:9.96:0,10,731	0/0:22,1:23:10.96:0,11,671	0/0:19,0:19:36.08:0,36,541	0/0:28,1:29:45.58:0,46,643	0/0:23,0:23:60.17:0,60,915	0/0:23,1:24:16.95:0,17,725	0/0:21,0:21:42.02:0,42,574	0/0:23,0:23:54.15:0,54,805	0/0:16,0:16:32.98:0,33,417	0/0:42,2:44:35.15:0,35,1025	0/0:9,0:9:21.52:0,22,283	0/0:18,0:18:33.05:0,33,506	0/0:34,1:35:49.61:0,50,921	1/1:10,11:19:17.74:167,18,0	0/0:20,0:20:50.76:0,51,797	0/0:15,0:15:24.55:0,25,377	0/0:5,0:5:12.04:0,12,197
chr10	108791475	.	GCACACACACACACA	G	2543.17	PASS	AB=0.937;AC=19;AF=0.339;AN=56;BaseQRankSum=5.034;DP=654;FS=24.227;HRun=0;HaplotypeScore=232.0287;InbreedingCoeff=-0.0094;MQ=48.22;MQ0=33;MQRankSum=-2.390;QD=6.84;ReadPosRankSum=1.079;VQSLOD=0.6854;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:64.62:65,0,78	0/0:9,0:9:15.05:0,15,656	0/0:51,0:12:2.92:0,3,17	0/0:53,0:12:2.96:0,3,19	0/1:23,0:22:11.10:11,0,237	0/0:18,0:16:6.02:0,6,290	0/0:31,0:31:0.94:0,1,2	0/0:17,0:15:15.68:0,16,90	0/0:22,0:19:0.56:0,1,885	0/0:18,0:18:31.90:0,32,1162	0/0:8,0:8:15.05:0,15,629	1/1:24,1:25:18.33:231,18,0	0/1:14,14:28:14.90:338,0,15	1/1:6,13:20:4.39:151,4,0	0/1:13,15:29:8.97:362,0,9	0/0:18,0:18:36.09:0,36,1676	0/1:28,0:28:32.90:47,0,33	0/1:27,0:27:72.18:165,0,72	0/1:20,0:19:55.76:81,0,56	0/1:10,0:10:18.95:89,0,19	0/1:44,0:42:26.13:26,0,197	1/1:4,9:13:12.50:440,12,0	0/0:11,1:15:1.41:0,1,3	1/1:24,4:32:11.21:274,11,0	0/0:17,0:14:5.87:0,6,269	0/1:21,0:21:85.76:194,0,86	0/1:17,0:17:6:230,0,6	0/0:4,0:4:2.97:0,3,22
chr10	108791498	.	C	CAT	443.78	PASS	AB=0.796;AC=7;AF=0.125;AN=56;BaseQRankSum=4.233;DP=675;FS=20.361;HRun=0;HaplotypeScore=185.7704;InbreedingCoeff=0.5028;MQ=45.20;MQ0=31;MQRankSum=-2.263;QD=3.76;ReadPosRankSum=1.154;VQSLOD=1.3269;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:60.98:0,61,457	0/0:10,0:10:17.98:0,18,152	0/0:29,0:8:17.90:0,18,154	0/0:47,0:10:26.92:0,27,218	1/1:19,5:24:17.13:134,17,0	0/1:15,2:17:2.54:25,0,3	1/1:34,4:38:4.56:106,5,0	0/0:16,0:14:38.73:0,39,295	0/1:15,3:17:12.40:218,0,12	0/0:23,0:23:65.83:0,66,647	0/0:8,0:8:21:0,21,229	0/0:27,0:27:42.01:0,42,333	0/0:22,0:22:7.76:0,8,176	0/0:18,0:18:15.31:0,15,106	0/0:28,0:27:22.58:0,23,154	0/0:17,0:17:44.84:0,45,466	0/0:34,0:33:17.60:0,18,118	0/0:38,0:38:32.15:0,32,214	0/0:25,0:24:32.83:0,33,255	0/0:13,0:13:8.96:0,9,69	0/0:59,0:57:87.42:0,87,670	0/0:17,0:16:16.19:0,16,106	0/0:15,0:15:11.51:0,12,93	0/0:28,0:27:29.64:0,30,219	0/1:9,12:20:12.74:93,0,13	0/0:20,0:19:34.54:0,35,240	0/0:19,0:19:16.55:0,17,114	0/0:7,0:7:20.85:0,21,152
chr10	108791504	.	CACACACACACACACACAT	C	4459.91	PASS	AB=0.893;AC=26;AF=0.464;AN=56;BaseQRankSum=4.227;DP=670;FS=1.014;HRun=0;HaplotypeScore=279.1944;InbreedingCoeff=0.1266;MQ=46.23;MQ0=28;MQRankSum=-0.104;QD=9.16;ReadPosRankSum=1.836;VQSLOD=3.5256;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:35,2:36:46.82:748,47,0	0/0:11,0:11:21:0,21,872	0/0:22,0:10:20.21:0,20,312	0/0:42,0:14:26.34:0,26,447	0/1:22,0:22:12.72:13,0,303	0/0:17,0:17:6.02:0,6,359	0/1:37,0:37:65.94:66,0,119	1/1:15,0:13:14.76:210,15,0	0/0:19,0:18:24.08:0,24,1113	0/0:23,0:23:55.62:0,56,1935	0/0:9,0:9:24.07:0,24,1069	0/1:26,0:26:18.74:19,0,348	0/1:20,0:20:61.93:96,0,62	0/1:17,0:17:39.42:39,0,57	0/1:28,0:27:73.05:160,0,73	0/0:22,0:22:60.11:0,60,2376	0/1:12,23:34:18.21:105,0,18	0/1:10,30:40:31.12:285,0,31	1/1:9,17:24:44.18:537,44,0	0/1:2,12:14:38.03:146,0,38	1/1:60,0:58:54.78:629,55,0	0/1:17,0:16:30.93:175,0,31	0/0:17,0:17:16.39:0,16,126	0/1:27,0:26:53.92:54,0,111	0/1:21,0:20:7.38:7,0,279	1/1:6,15:20:35.97:607,36,0	1/1:3,15:18:12.66:398,13,0	1/1:6,0:6:11.96:165,12,0
chr10	108792826	.	A	AC	14525.79	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-9.473;DP=640;FS=3.942;HRun=3;HaplotypeScore=63.1048;InbreedingCoeff=0.9999;MQ=81.98;MQ0=0;MQRankSum=-3.162;QD=38.23;ReadPosRankSum=1.299;VQSLOD=5.3878;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,53:54:99:2142,154,0	0/0:12,0:12:33.10:0,33,395	0/0:14,0:14:40:0,40,467	0/0:21,0:21:63.03:0,63,685	1/1:1,17:18:48.16:671,48,0	1/1:1,27:28:75.25:1050,75,0	1/1:1,20:21:50.90:712,51,0	1/1:2,29:31:87.28:1201,87,0	1/1:2,19:21:60.20:838,60,0	0/0:34,0:34:93.28:0,93,1108	0/0:15,0:15:42.13:0,42,504	0/0:19,0:19:57.17:0,57,683	0/0:15,0:15:39.12:0,39,468	0/0:26,0:26:72.21:0,72,851	0/0:24,0:24:63.19:0,63,755	0/0:20,0:20:60.18:0,60,719	1/1:1,29:30:81.27:1134,81,0	1/1:3,23:26:63.21:882,63,0	1/1:1,19:20:57.18:778,57,0	1/1:0,20:20:60.20:840,60,0	1/1:6,34:40:99:1475,108,0	0/0:23,0:23:66.20:0,66,792	0/0:19,0:19:57.17:0,57,684	0/0:18,0:18:54.17:0,54,648	1/1:0,18:18:51.17:713,51,0	1/1:3,21:24:66.19:888,66,0	1/1:0,18:18:54.18:756,54,0	1/1:1,10:11:33.10:445,33,0
chr10	108793643	.	G	GA	5063.62	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.985;DP=701;FS=13.589;HRun=3;HaplotypeScore=101.8032;InbreedingCoeff=0.9928;MQ=83.73;MQ0=0;MQRankSum=-0.207;QD=38.36;ReadPosRankSum=-0.088;VQSLOD=3.0657;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,129,1533	0/0:5,0:5:12.04:0,12,144	0/0:21,0:21:56.61:0,57,610	0/0:20,0:20:56.72:0,57,616	1/1:8,23:31:87.27:1182,87,0	1/1:2,23:25:72.23:992,72,0	1/1:2,23:25:60.20:831,60,0	0/0:33,0:33:96.26:0,96,1121	1/1:0,28:28:81.27:1134,81,0	0/0:24,0:24:63.19:0,63,755	0/0:22,0:22:57.17:0,57,684	0/0:16,0:16:48.15:0,48,576	0/0:27,0:27:75.20:0,75,875	0/0:19,0:19:54.15:0,54,637	0/0:25,0:25:72.22:0,72,864	0/0:23,0:23:66.18:0,66,770	0/0:35,0:35:99:0,99,1174	0/0:29,0:28:78.24:0,78,935	0/0:28,0:27:75.20:0,75,869	0/0:20,0:20:54.16:0,54,644	0/0:22,0:22:63.17:0,63,741	0/0:23,0:23:60.18:0,60,720	0/0:25,0:25:69.21:0,69,828	0/0:41,0:41:99:0,120,1440	1/1:3,20:23:66.22:924,66,0	0/0:28,0:28:81.22:0,81,942	0/0:24,0:24:69.19:0,69,815	0/0:11,0:11:33.10:0,33,396
chr10	108793740	.	GT	G	3762.84	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.762;DP=692;FS=5.090;HRun=7;HaplotypeScore=67.9088;InbreedingCoeff=0.9997;MQ=77.34;MQ0=0;MQRankSum=-4.619;QD=26.13;ReadPosRankSum=3.232;VQSLOD=4.5401;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.26:0,81,1018	0/0:16,0:16:42.13:0,42,528	0/0:21,0:21:54.16:0,54,650	0/0:19,0:18:43.17:0,43,486	1/1:1,39:40:99:1133,111,0	1/1:4,24:28:63.14:643,63,0	1/1:0,13:13:36.08:367,36,0	0/0:34,0:34:87.27:0,87,1083	1/1:0,30:30:84.19:857,84,0	0/0:36,0:36:99:0,102,1260	0/0:24,0:24:69.22:0,69,868	0/0:14,0:14:39.12:0,39,491	0/0:25,0:25:72.22:0,72,886	0/0:13,0:13:30.10:0,30,377	0/0:24,0:24:72.19:0,72,867	0/0:24,0:24:66.21:0,66,830	0/0:26,0:26:75.24:0,75,943	0/0:28,0:28:72.23:0,72,904	0/0:19,0:19:39.12:0,39,479	0/0:25,0:25:69.21:0,69,853	0/0:20,0:20:57.17:0,57,704	0/0:17,0:17:42.12:0,42,517	0/0:28,0:28:78.25:0,78,979	0/0:31,0:31:87.28:0,87,1094	1/1:4,29:33:75.17:763,75,0	0/0:30,0:30:75.23:0,75,931	0/0:36,0:36:99:0,102,1281	0/0:11,0:11:30.10:0,30,377
chr10	108796462	.	C	CA	342.91	PASS	AB=0.812;AC=5;AF=0.089;AN=56;BaseQRankSum=7.952;DP=655;FS=3.942;HRun=1;HaplotypeScore=104.9867;InbreedingCoeff=-0.0968;MQ=71.31;MQ0=2;MQRankSum=-4.177;QD=3.40;ReadPosRankSum=1.460;VQSLOD=0.4284;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:96.02:0,96,1142	0/0:9,0:9:27.06:0,27,347	0/0:32,0:23:62.96:0,63,721	0/0:40,0:29:62.81:0,63,737	0/1:8,2:11:24.94:89,0,25	0/1:17,5:22:43.55:104,0,44	0/1:20,4:24:78.70:79,0,89	0/0:23,0:22:63.19:0,63,838	0/1:17,9:26:99:162,0,121	0/0:26,0:26:62.76:0,63,738	0/0:12,0:12:29.98:0,30,333	0/0:25,0:25:75.15:0,75,965	0/0:18,0:18:54.06:0,54,662	0/0:22,0:22:60.07:0,60,721	0/0:28,0:28:81.11:0,81,1008	0/0:18,0:18:54.07:0,54,654	0/0:48,0:48:99:0,126,1629	0/0:29,0:29:81.19:0,81,1059	0/0:24,0:22:59.86:0,60,778	0/0:19,0:19:28.75:0,29,590	0/0:43,0:43:99:0,108,1447	0/0:14,0:14:39.11:0,39,492	0/0:13,0:13:33.11:0,33,446	0/0:22,0:22:63.08:0,63,787	0/1:15,3:17:26.96:27,0,67	0/0:22,0:22:58.02:0,58,715	0/0:15,0:15:44.63:0,45,584	0/0:11,0:11:33:0,33,379
chr10	108796463	.	C	CACACACACA	2485.67	PASS	AB=0.819;AC=5;AF=0.089;AN=56;BaseQRankSum=6.305;DP=648;FS=3.967;HRun=0;HaplotypeScore=197.2669;InbreedingCoeff=-0.0977;MQ=70.78;MQ0=2;MQRankSum=-4.976;QD=25.11;ReadPosRankSum=0.157;VQSLOD=3.2015;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,105,2364	0/0:9,0:9:27.09:0,27,772	0/0:32,0:23:65.34:0,65,1069	0/0:38,0:28:65.01:0,65,1267	0/1:8,1:10:32.37:315,0,32	0/1:16,2:21:54.50:432,0,54	0/1:21,2:25:61.78:405,0,62	0/0:24,0:23:60.17:0,60,1462	0/1:16,7:25:99:1163,0,100	0/0:27,0:27:71.03:0,71,1734	0/0:12,0:12:33.05:0,33,823	0/0:25,0:25:75.24:0,75,2084	0/0:19,0:19:54.13:0,54,1382	0/0:21,0:21:60.17:0,60,1437	0/0:28,0:28:84.24:0,84,2387	0/0:18,0:18:54.16:0,54,1360	0/0:48,0:48:99:0,135,3510	0/0:28,0:28:81.24:0,81,2218	0/0:24,0:22:58.32:0,58,1462	0/0:18,0:18:50.86:0,51,1121	0/0:45,0:45:99:0,126,3316	0/0:14,0:14:39.08:0,39,767	0/0:12,0:12:33.08:0,33,794	0/0:20,0:20:60.19:0,60,1707	0/1:15,2:17:33.48:287,0,33	0/0:22,0:22:59.22:0,59,1414	0/0:15,0:15:45.13:0,45,1186	0/0:11,0:11:27.07:0,27,763
chr10	108798243	.	GAA	G	4389.15	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=6.909;DP=471;FS=10.620;HRun=13;HaplotypeScore=65.5919;InbreedingCoeff=0.8599;MQ=60.23;MQ0=8;MQRankSum=1.361;QD=13.34;ReadPosRankSum=4.050;VQSLOD=2.5822;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,26:33:26.69:294,27,0	0/0:11,0:11:21.02:0,21,234	0/0:40,0:11:14.70:0,15,140	0/1:33,0:11:9.41:21,0,9	1/1:2,0:15:23.09:98,23,0	1/1:1,0:13:21.96:95,22,0	1/1:0,0:4:5.49:24,5,0	1/1:6,16:22:19.55:322,20,0	1/1:1,0:8:8.23:35,8,0	0/0:12,0:13:32.58:0,33,408	0/0:12,0:13:13.52:0,14,304	0/0:5,0:6:15.04:0,15,198	0/0:10,0:10:29.46:0,29,367	0/0:10,0:9:24.31:0,24,295	0/0:9,0:12:23.75:0,24,301	0/0:8,0:8:18.04:0,18,221	1/1:7,41:49:93.04:947,93,0	1/1:9,26:36:51.70:543,52,0	1/1:6,16:22:47.99:442,48,0	1/1:8,22:30:57.27:556,57,0	1/1:2,3:5:5.99:58,6,0	0/0:2,0:2:6.02:0,6,87	0/0:11,0:11:27.08:0,27,367	0/0:6,0:6:9.03:0,9,130	1/1:1,0:14:27.43:119,27,0	1/1:5,8:13:35.87:328,36,0	1/1:4,16:20:23.89:333,24,0	1/1:1,10:11:18.03:173,18,0
chr10	108798467	.	TG	T	12017.69	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=11.148;DP=574;FS=1.804;HRun=2;HaplotypeScore=55.9946;InbreedingCoeff=0.9966;MQ=81.50;MQ0=0;MQRankSum=-3.086;QD=34.53;ReadPosRankSum=-0.715;VQSLOD=4.6287;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,37:39:99:1252,99,0	0/0:8,0:8:24.08:0,24,360	0/0:15,0:15:45.13:0,45,646	0/0:24,0:24:56.67:0,57,797	1/1:0,14:14:42.07:524,42,0	1/1:0,15:15:39.06:485,39,0	1/1:0,26:26:75.24:973,75,0	1/1:0,28:28:81.24:1023,81,0	1/1:0,25:25:75.24:973,75,0	0/0:9,0:9:27.08:0,27,387	0/0:9,0:9:27.09:0,27,404	0/0:26,0:26:78.25:0,78,1136	0/0:20,0:20:60.20:0,60,894	0/0:25,0:25:72.24:0,72,1074	0/0:26,0:26:75.20:0,75,1096	0/0:16,0:16:48.16:0,48,718	1/1:1,40:41:99:1283,99,0	1/1:0,39:39:99:1323,102,0	1/1:0,14:14:42.14:544,42,0	1/1:0,12:12:30.10:389,30,0	1/1:0,39:39:99:1284,99,0	0/0:5,0:5:15.05:0,15,219	0/0:8,0:8:24.07:0,24,339	0/0:35,0:35:99:0,105,1550	1/1:0,17:17:48.16:623,48,0	1/1:0,13:13:39.12:493,39,0	1/1:0,17:17:42.13:538,42,0	1/1:0,9:9:24.08:311,24,0
chr10	108799473	.	C	CTACT	6840.14	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-9.715;DP=628;FS=2.530;HRun=0;HaplotypeScore=105.1710;InbreedingCoeff=0.9407;MQ=76.79;MQ0=0;MQRankSum=-3.091;QD=55.61;ReadPosRankSum=0.820;VQSLOD=5.9466;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,99,1812	0/0:3,0:3:9.03:0,9,168	0/0:15,0:15:31.11:0,31,523	0/0:14,0:15:2.22:0,2,241	1/1:1,11:13:21.03:499,21,0	1/1:5,10:16:27.09:695,27,0	1/1:4,28:33:78.27:2078,78,0	0/0:21,0:21:45.08:0,45,725	1/1:2,22:27:69.24:1828,69,0	0/0:21,0:21:57.20:0,57,1053	0/0:13,0:13:36.11:0,36,627	0/0:26,0:26:69.24:0,69,1284	0/0:20,0:20:57.20:0,57,1056	0/0:38,0:38:99:0,102,1889	0/0:27,0:27:72.23:0,72,1313	0/0:14,0:14:42.14:0,42,778	0/0:46,0:46:99:0,135,2403	0/0:25,0:25:69.24:0,69,1276	0/0:21,0:21:54.16:0,54,918	0/0:12,0:12:33.10:0,33,566	0/0:41,0:41:99:0,114,2025	0/0:20,0:20:57.20:0,57,1049	0/0:7,0:7:21.07:0,21,384	0/0:27,0:27:72.22:0,72,1273	1/1:5,27:34:66.23:1740,66,0	0/0:22,0:22:63.20:0,63,1145	0/0:22,0:22:60.21:0,60,1110	0/0:11,0:11:33.11:0,33,616
chr10	108799915	.	A	AGTGC	3106	PASS	AB=0.922;AC=18;AF=0.321;AN=56;BaseQRankSum=1.708;DP=653;FS=4.448;HRun=0;HaplotypeScore=168.3350;InbreedingCoeff=0.7643;MQ=64.74;MQ0=0;MQRankSum=-5.084;QD=13.45;ReadPosRankSum=-0.273;VQSLOD=2.7598;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,2:36:6.67:430,7,0	0/0:19,0:19:51.16:0,51,814	0/0:17,0:17:24.07:0,24,340	0/0:19,0:16:26.95:0,27,321	0/0:23,0:23:51.13:0,51,668	0/0:17,0:17:27.09:0,27,365	0/0:31,0:31:42.57:0,43,555	1/1:14,8:22:27.97:464,28,0	0/0:21,0:21:42.10:0,42,534	0/0:32,0:32:63.20:0,63,972	0/0:20,0:20:54.17:0,54,870	0/0:33,0:33:75.26:0,75,1228	0/0:25,0:25:60.20:0,60,984	0/0:27,0:27:60.18:0,60,931	0/0:20,0:20:42.13:0,42,663	0/0:24,0:24:63.18:0,63,991	1/1:28,2:30:37.04:592,37,0	1/1:15,1:16:6.64:167,7,0	1/1:24,0:24:19.76:435,20,0	1/1:12,0:12:0.66:188,1,0	1/1:34,2:36:15.97:277,16,0	0/0:22,0:22:48.14:0,48,743	0/0:14,0:14:30.08:0,30,468	0/0:32,0:32:66.18:0,66,1065	0/0:26,0:26:39.06:0,39,471	0/1:22,4:27:38.48:523,0,38	0/1:15,0:14:6.07:129,0,6	1/1:13,0:13:7.72:93,8,0
chr10	108799932	.	GTGCA	G	3036.07	PASS	AB=0.880;AC=20;AF=0.357;AN=56;BaseQRankSum=14.888;DP=599;FS=0.360;HRun=0;HaplotypeScore=170.3410;InbreedingCoeff=0.2308;MQ=52.52;MQ0=0;MQRankSum=-11.682;QD=9.92;ReadPosRankSum=1.407;VQSLOD=3.0335;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,7:31:21.76:243,0,22	0/0:19,0:19:54.63:0,55,1336	0/0:15,0:15:36.07:0,36,606	0/0:18,0:14:39.04:0,39,553	0/1:22,0:22:99:116,0,483	0/1:15,0:15:99:119,0,214	0/1:25,0:25:20.91:21,0,682	0/1:12,1:13:91.18:107,0,91	0/1:19,0:19:56.35:56,0,584	0/0:30,0:30:84.17:0,84,1746	0/0:25,0:25:69.15:0,69,1520	0/0:32,0:32:90.23:0,90,2091	0/0:22,0:22:66.20:0,66,1654	0/0:25,0:25:72.16:0,72,1585	0/0:16,0:16:45.11:0,45,1013	0/0:24,0:24:72.21:0,72,1742	1/1:24,10:34:27.04:427,27,0	1/1:7,7:14:28.24:346,28,0	0/1:13,6:19:99:244,0,130	1/1:3,7:10:23.60:238,24,0	1/1:27,5:32:21.89:165,22,0	0/0:20,0:20:54.14:0,54,1285	0/0:14,0:14:36.11:0,36,861	0/0:33,0:33:90.18:0,90,1996	0/1:22,0:22:91.83:92,0,387	0/1:8,14:22:45.72:545,0,46	0/1:9,8:16:9.28:279,0,9	1/1:7,4:11:19.11:232,19,0
chr10	108799942	.	GCGCC	G	5513.16	PASS	AB=0.931;AC=24;AF=0.429;AN=56;BaseQRankSum=16.417;DP=589;FS=4.822;HRun=0;HaplotypeScore=172.2806;InbreedingCoeff=0.5571;MQ=52.32;MQ0=0;MQRankSum=-11.326;QD=18.02;ReadPosRankSum=-0.229;VQSLOD=4.5410;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,7:34:10.98:365,11,0	0/0:19,0:19:57.15:0,57,1467	0/0:17,0:16:40.06:0,40,966	0/0:16,0:12:27.56:0,28,610	0/1:22,0:22:85.87:232,0,86	0/1:15,0:15:18.97:279,0,19	0/1:28,0:28:68.94:240,0,69	1/1:8,1:9:11.85:241,12,0	0/1:21,0:21:75.19:380,0,75	0/0:29,0:29:81.28:0,81,2138	0/0:23,0:23:66.23:0,66,1802	0/0:30,0:30:87.30:0,87,2372	0/0:23,0:23:66.23:0,66,1761	0/0:24,0:24:72.23:0,72,1888	0/0:14,0:14:42.14:0,42,1161	0/0:22,0:22:66.23:0,66,1844	1/1:23,10:33:44.18:612,44,0	1/1:9,7:16:38.72:479,39,0	1/1:12,6:18:19.53:425,20,0	1/1:6,7:13:24.07:340,24,0	1/1:21,5:26:14.31:131,14,0	0/0:18,0:18:51.16:0,51,1363	0/0:11,0:11:33.11:0,33,869	0/0:37,0:37:99:0,102,2685	0/1:22,0:22:52.41:378,0,52	0/1:6,14:20:8.55:701,0,9	1/1:9,8:16:19.64:408,20,0	1/1:8,4:12:21.95:301,22,0
chr10	108799944	.	GCCCA	G	4009.64	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=16.774;DP=581;FS=5.491;HRun=0;HaplotypeScore=175.6487;InbreedingCoeff=0.8778;MQ=56.36;MQ0=0;MQRankSum=-11.684;QD=13.68;ReadPosRankSum=0.356;VQSLOD=2.8205;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:29.79:341,30,0	0/0:18,0:18:54.17:0,54,1467	0/0:19,0:18:44.47:0,44,1257	0/0:16,0:12:30.54:0,31,692	1/1:10,11:21:2.30:300,2,0	1/1:8,7:15:24.61:264,25,0	1/1:21,5:26:7.55:199,8,0	1/1:9,0:9:1.53:154,2,0	1/1:17,3:20:13.38:284,13,0	0/0:30,0:30:84.29:0,84,2353	0/0:23,0:23:66.21:0,66,1849	0/0:31,0:31:93.32:0,93,2627	0/0:22,0:22:66.20:0,66,1731	0/0:24,0:24:72.25:0,72,2013	0/0:16,0:16:48.16:0,48,1338	0/0:22,0:22:66.23:0,66,1900	1/1:30,2:32:37.31:497,37,0	1/1:16,0:16:31.25:252,31,0	1/1:16,0:16:29.19:239,29,0	1/1:13,0:13:23.96:221,24,0	1/1:22,2:24:14.42:128,14,0	0/0:18,0:18:51.18:0,51,1465	0/0:11,0:11:33.08:0,33,865	0/0:38,0:38:99:0,105,2928	1/1:14,9:23:8.72:292,9,0	1/1:21,0:21:7.81:455,8,0	1/1:14,0:14:29.78:237,30,0	1/1:11,0:11:1.30:148,1,0
chr10	108799949	.	TGCGTGCGC	T	3501.85	PASS	AB=0.926;AC=18;AF=0.321;AN=56;BaseQRankSum=16.202;DP=599;FS=31.257;HRun=0;HaplotypeScore=220.3976;InbreedingCoeff=-0.0012;MQ=59.41;MQ0=0;MQRankSum=-11.360;QD=11.19;ReadPosRankSum=4.624;VQSLOD=1.0154;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:10.12:178,0,10	0/0:16,0:16:48.14:0,48,1761	0/0:20,0:19:57.09:0,57,1468	0/0:17,0:13:36.07:0,36,918	0/1:9,11:20:42.28:512,0,42	1/1:6,7:13:16.68:462,17,0	0/1:24,5:29:99:205,0,197	0/1:9,0:9:38.11:38,0,110	0/1:18,3:21:29.05:308,0,29	0/0:29,0:29:82.14:0,82,2965	0/0:22,0:22:63.20:0,63,2778	0/0:31,0:31:93.31:0,93,3866	0/0:20,0:20:57.15:0,57,1962	0/0:26,0:26:75.22:0,75,2705	0/0:16,0:16:48.13:0,48,1785	0/0:22,0:22:66.20:0,66,2761	0/1:36,0:36:99:187,0,199	0/1:18,0:18:89.39:166,0,89	0/1:19,0:19:99:124,0,217	1/1:13,0:13:10.67:205,11,0	0/1:28,0:28:8.79:51,0,9	0/0:19,0:19:51.18:0,51,2086	0/0:10,0:10:30.04:0,30,769	0/0:38,0:38:99:0,105,3762	0/1:16,9:25:99:398,0,106	0/1:22,0:22:39.14:355,0,39	1/1:14,0:14:1.15:190,1,0	0/1:11,0:11:7.20:124,0,7
chr10	108804894	.	G	GGCAGCAGCAGCAGCAGCAGCAGCAGCA	27440.56	PASS	AB=1.000;AC=40;AF=0.741;AN=54;BaseQRankSum=2.741;DP=519;FS=3.718;HRun=0;HaplotypeScore=324.4943;InbreedingCoeff=0.8009;MQ=73.47;MQ0=1;MQRankSum=-9.073;QD=66.28;ReadPosRankSum=0.585;VQSLOD=2.9777;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:2.99:24,3,0	0/0:11,0:11:27.09:0,27,1408	0/0:27,0:25:29.33:0,29,751	0/0:24,0:22:21.07:0,21,580	0/1:11,0:11:0:1,0,0	1/1:11,0:10:5.95:43,6,0	1/1:35,0:35:36.50:2717,36,0	1/1:16,0:16:21.07:547,21,0	1/1:24,0:24:36.08:1674,36,0	0/0:13,0:13:21.07:0,21,993	0/0:7,0:7:12.03:0,12,464	1/1:20,8:31:24.08:2139,24,0	1/1:27,0:27:48.14:3170,48,0	1/1:23,0:23:36.10:2623,36,0	1/1:16,9:25:21.07:2261,21,0	0/0:20,0:20:54.17:0,54,2943	1/1:22,0:23:45.15:3009,45,0	1/1:16,0:17:27.07:1550,27,0	1/1:19,0:19:31.53:872,32,0	1/1:6,0:6:4.55:29,5,0	1/1:23,0:21:6.44:46,6,0	./.	1/1:10,0:10:2.99:23,3,0	1/1:21,7:34:11.62:1368,12,0	0/1:9,0:9:0:0,0,0	1/1:17,0:17:18.50:240,19,0	1/1:20,0:20:43.68:2758,44,0	1/1:18,0:17:42.13:2347,42,0
chr10	108804918	.	A	AG	732.09	PASS	AB=0.804;AC=7;AF=0.125;AN=56;BaseQRankSum=7.693;DP=449;FS=34.411;HRun=0;HaplotypeScore=99.1806;InbreedingCoeff=-0.1723;MQ=59.42;MQ0=1;MQRankSum=-5.047;QD=5.05;ReadPosRankSum=0.299;VQSLOD=1.6771;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.14:0,42,585	0/0:11,0:11:33.09:0,33,443	0/0:19,0:17:51.11:0,51,644	0/0:13,0:11:33.08:0,33,424	0/0:6,0:6:6.01:0,6,84	0/0:10,0:9:27.09:0,27,374	0/0:22,11:33:47.98:0,48,666	0/1:11,1:12:15.90:16,0,331	0/0:18,7:25:9.39:0,9,703	0/0:14,0:14:39.13:0,39,546	0/0:11,0:11:30.09:0,30,402	0/0:21,0:21:4.82:0,5,598	0/1:18,8:26:99:165,0,527	0/0:21,5:26:9.55:0,10,702	0/0:15,0:16:41.93:0,42,553	0/0:25,0:25:75.25:0,75,1049	0/1:21,8:28:99:145,0,528	0/1:6,7:13:99:156,0,182	0/0:10,0:10:24.08:0,24,335	0/0:2,0:2:6.02:0,6,84	0/0:22,2:23:45.15:0,45,628	0/0:6,0:6:15.04:0,15,209	0/0:3,0:3:6.01:0,6,84	0/1:26,0:26:13.72:14,0,385	0/0:3,0:3:6:0,6,83	0/0:11,0:11:24.06:0,24,335	0/1:13,8:21:99:179,0,471	0/1:13,5:17:99:186,0,449
chr10	108804925	.	C	CAG	511.20	PASS	AB=0.871;AC=9;AF=0.161;AN=56;BaseQRankSum=8.024;DP=464;FS=14.705;HRun=0;HaplotypeScore=111.3285;InbreedingCoeff=-0.1828;MQ=59.47;MQ0=1;MQRankSum=-4.537;QD=2.49;ReadPosRankSum=-2.057;VQSLOD=0.9274;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.16:0,48,783	0/0:10,0:10:30.10:0,30,482	0/0:17,0:15:44.63:0,45,638	0/0:13,0:11:20.14:0,20,343	0/0:6,0:6:9.02:0,9,123	0/0:10,0:10:30.10:0,30,489	0/1:28,7:35:15.94:16,0,692	0/1:11,1:12:4.39:4,0,360	0/0:22,4:26:53.93:0,54,880	0/0:13,0:13:36.12:0,36,579	0/0:12,0:12:33.11:0,33,521	0/1:21,0:21:2.18:2,0,813	0/1:19,4:23:3.57:4,0,699	0/0:22,5:27:63.17:0,63,998	0/0:17,0:17:48.16:0,48,772	0/0:24,0:24:72.25:0,72,1175	0/1:23,7:29:67.51:68,0,774	0/1:12,3:15:88.30:88,0,406	0/0:11,0:11:30.09:0,30,466	0/0:3,0:3:9.03:0,9,144	0/0:25,1:25:54.08:0,54,791	0/0:8,0:8:14.73:0,15,244	0/0:5,0:5:12.04:0,12,194	0/1:28,0:28:14.42:14,0,525	0/0:4,0:4:2.99:0,3,49	0/0:11,0:11:33.11:0,33,538	0/1:15,7:22:99:207,0,628	0/1:15,4:18:99:235,0,536
chr10	108805479	.	TCACACACACACA	T	2124.85	PASS	AB=0.843;AC=18;AF=0.360;AN=50;BaseQRankSum=4.154;DP=544;FS=8.803;HRun=0;HaplotypeScore=159.6586;InbreedingCoeff=0.3052;MQ=50.75;MQ0=20;MQRankSum=-4.489;QD=9.61;ReadPosRankSum=0.349;VQSLOD=1.9901;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:41:26.37:26,0,35	0/0:7,0:8:15.05:0,15,729	./.	./.	0/1:8,4:11:0:0,0,0	1/1:8,4:12:3.01:97,3,0	0/1:18,3:21:20.63:168,0,21	0/0:18,0:18:4.80:0,5,27	0/1:6,3:9:15.18:98,0,15	0/0:25,0:25:33.11:0,33,1159	0/0:11,0:10:15.05:0,15,538	0/0:25,0:25:24.08:0,24,723	0/0:10,0:11:18.05:0,18,481	0/0:12,0:13:12.04:0,12,275	0/0:13,0:16:15.05:0,15,535	0/0:12,0:13:18.04:0,18,755	1/1:16,5:20:9.91:310,10,0	1/1:14,2:18:18:388,18,0	0/1:14,0:12:0.94:98,0,1	0/1:7,3:11:15.02:189,0,15	./.	0/0:14,0:14:9.03:0,9,263	0/0:11,0:12:6.02:0,6,199	0/0:23,0:30:21.07:0,21,777	0/1:14,4:18:13.98:14,0,17	0/1:14,3:15:99:296,0,139	1/1:8,4:12:12.04:406,12,0	1/1:10,2:12:9.03:199,9,0
chr10	108806176	.	GACACAC	G	1276.45	PASS	AB=0.927;AC=27;AF=0.500;AN=54;BaseQRankSum=7.654;DP=516;FS=10.332;HRun=0;HaplotypeScore=105.3615;InbreedingCoeff=0.4268;MQ=63.04;MQ0=10;MQRankSum=-1.404;QD=4.61;ReadPosRankSum=0.702;VQSLOD=1.4460;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:33:25.53:26,0,76	0/0:6,0:7:14.27:0,14,366	0/0:34,0:15:2.92:0,3,17	0/0:36,0:22:12.02:0,12,128	./.	1/1:8,0:15:7.44:51,7,0	0/1:14,0:33:10.99:21,0,11	0/0:24,0:23:4.77:0,5,17	1/1:6,1:14:7.79:128,8,0	0/0:19,0:19:33.04:0,33,854	0/0:12,0:13:14.79:0,15,337	1/1:8,3:11:6.91:126,7,0	1/1:6,5:12:6:104,6,0	1/1:3,10:12:6.02:125,6,0	1/1:7,12:20:19.21:327,19,0	0/0:18,0:18:33.08:0,33,771	0/1:25,0:25:32.29:81,0,32	0/1:19,0:19:26.48:26,0,66	0/0:12,0:12:4.59:0,5,45	1/1:9,0:9:5.97:57,6,0	0/0:41,0:40:5.62:0,6,47	1/1:4,1:7:9.02:117,9,0	1/1:5,0:6:10.82:98,11,0	1/1:14,19:33:8.76:53,9,0	0/0:7,0:11:1.52:0,2,35	0/1:18,0:17:0.12:0,0,0	0/0:16,0:16:1.91:0,2,22	1/1:8,0:8:9.03:115,9,0
chr10	108806208	.	CAT	C	2263.99	PASS	AB=0.998;AC=29;AF=0.537;AN=54;BaseQRankSum=1.981;DP=543;FS=40.812;HRun=0;HaplotypeScore=73.7542;InbreedingCoeff=0.0760;MQ=55.40;MQ0=14;MQRankSum=-4.439;QD=5.51;ReadPosRankSum=-5.532;VQSLOD=-0.5828;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:37,1:37:5.89:38,6,0	0/0:9,0:9:23.97:0,24,248	0/1:24,0:9:3.51:4,0,70	0/1:30,0:8:10.34:10,0,54	0/1:6,0:6:1.21:1,0,47	0/1:20,0:20:29.23:29,0,134	0/1:31,0:31:17.11:17,0,110	1/1:9,20:28:64.53:536,65,0	0/1:13,0:13:23.07:39,0,23	0/1:25,0:25:5.23:5,0,582	0/0:10,0:9:20.97:0,21,214	0/1:8,0:8:3.47:3,0,19	0/0:18,0:18:11.54:0,12,148	0/0:15,0:13:10.27:0,10,67	0/1:17,0:17:16.94:33,0,17	0/0:21,0:20:9.41:0,9,432	1/1:26,1:27:61.79:443,62,0	0/1:19,0:19:14.27:14,0,17	1/1:10,0:10:25.01:181,25,0	1/1:11,0:11:5.89:37,6,0	./.	0/1:9,0:9:31.75:32,0,48	0/1:8,0:8:7.89:8,0,67	0/1:34,0:34:48.03:48,0,110	0/0:11,0:11:1.94:0,2,89	1/1:28,0:27:50.60:568,51,0	1/1:9,0:9:20.78:145,21,0	1/1:13,0:13:32.79:245,33,0
chr10	108806661	.	T	TAACCCTG	30.18	PASS	AB=1.000;AC=3;AF=0.063;AN=48;BaseQRankSum=0.943;DP=488;FS=0.000;HRun=0;HaplotypeScore=89.7556;InbreedingCoeff=0.3802;MQ=47.99;MQ0=41;MQRankSum=-2.451;QD=1.78;ReadPosRankSum=-2.210;VQSLOD=1.3021;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:50:99:0,108,2525	0/0:5,0:4:12.04:0,12,323	0/0:15,0:1:3.01:0,3,81	0/0:15,0:5:15.05:0,15,404	./.	./.	1/1:1,0:0:3.01:86,3,0	0/0:33,0:24:72.23:0,72,1813	./.	0/0:24,0:20:60.21:0,60,1616	0/0:12,0:10:30.09:0,30,721	0/0:20,0:18:48.16:0,48,1292	0/0:20,0:20:48.08:0,48,1167	0/0:24,0:24:66.11:0,66,1597	0/0:20,0:20:54.10:0,54,1272	0/1:16,0:16:34.55:35,0,876	0/0:39,0:38:96.19:0,96,2429	0/0:24,0:21:60.17:0,60,1465	0/0:16,0:14:42.10:0,42,1017	0/0:15,0:13:36.04:0,36,848	0/0:28,0:24:60.21:0,60,1616	0/0:5,0:5:12:0,12,232	0/0:9,0:9:20.72:0,21,440	0/0:26,0:24:23.19:0,23,1407	./.	0/0:25,0:24:69.19:0,69,1742	0/0:25,0:25:63.15:0,63,1635	0/0:10,0:9:24.08:0,24,646
chr10	108806875	.	CT	C	7533.11	PASS	AB=0.900;AC=35;AF=0.761;AN=46;BaseQRankSum=4.762;DP=451;FS=1.608;HRun=9;HaplotypeScore=59.0075;InbreedingCoeff=0.8401;MQ=64.51;MQ0=2;MQRankSum=0.176;QD=20.09;ReadPosRankSum=0.970;VQSLOD=5.4218;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,33:38:81.03:741,81,0	0/0:7,0:7:21.06:0,21,242	0/1:8,1:8:12.43:12,0,114	0/0:8,0:8:2.73:0,3,83	./.	./.	./.	1/1:8,36:44:99:947,105,0	./.	0/0:24,0:24:60.16:0,60,678	0/0:26,0:26:78.22:0,78,889	1/1:2,13:16:35.02:301,35,0	1/1:2,17:19:48.02:439,48,0	1/1:0,15:15:33.02:302,33,0	1/1:3,16:19:45.02:412,45,0	0/0:11,0:11:30.09:0,30,346	1/1:5,21:26:51.02:467,51,0	1/1:3,14:17:42.02:384,42,0	1/1:4,22:25:52.02:550,52,0	1/1:3,21:24:65.87:590,66,0	1/1:2,13:15:36.02:329,36,0	1/1:2,9:11:24.01:220,24,0	1/1:6,11:17:23.93:220,24,0	1/1:0,12:12:27.01:247,27,0	./.	1/1:2,16:18:48.02:439,48,0	1/1:3,29:32:69.04:631,69,0	1/1:5,12:16:33.02:302,33,0
chr10	108806956	.	C	CCCATT	348.11	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=3.717;DP=564;FS=5.665;HRun=0;HaplotypeScore=99.4935;InbreedingCoeff=0.8842;MQ=63.61;MQ0=7;MQRankSum=-4.068;QD=24.87;ReadPosRankSum=-3.399;VQSLOD=2.3590;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,129,2716	0/0:15,0:15:45.14:0,45,1003	0/0:24,0:15:45.13:0,45,925	0/0:39,0:22:55.74:0,56,1247	./.	1/1:3,2:5:9.02:192,9,0	1/1:2,0:2:3.01:90,3,0	0/0:30,0:30:84.27:0,84,1857	1/1:4,3:6:8.99:184,9,0	0/0:20,0:20:57.18:0,57,1277	0/0:12,0:12:36.12:0,36,838	0/0:22,0:22:66.21:0,66,1443	0/0:23,0:23:66.21:0,66,1467	0/0:20,0:20:54.17:0,54,1213	0/0:18,0:18:48.15:0,48,1053	0/0:13,0:13:39.12:0,39,840	0/0:37,0:37:99:0,105,2372	0/0:17,0:17:48.16:0,48,1093	0/0:22,0:21:63.21:0,63,1419	0/0:24,0:24:51.20:0,51,1400	0/0:37,0:37:99:0,109,2467	0/0:28,0:28:78.10:0,78,1816	0/0:18,0:18:48.16:0,48,1087	0/0:16,0:16:45.07:0,45,991	./.	0/0:28,0:28:84.27:0,84,1912	0/0:25,0:24:60.19:0,60,1352	0/0:8,0:8:21.05:0,21,443
chr10	108809220	.	A	AG	4125.17	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-9.604;DP=459;FS=8.632;HRun=7;HaplotypeScore=47.9109;InbreedingCoeff=0.9660;MQ=69.75;MQ0=0;MQRankSum=-0.611;QD=23.84;ReadPosRankSum=0.191;VQSLOD=3.4816;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:28:54.15:640,54,0	0/0:5,0:5:12.02:0,12,116	0/0:10,0:8:17.93:0,18,153	0/0:11,0:8:14.85:0,15,125	0/0:7,0:7:11.92:0,12,104	0/0:14,0:14:39.06:0,39,377	0/0:30,0:30:84.05:0,84,789	1/1:3,12:16:39.11:454,39,0	0/0:12,0:12:30.04:0,30,285	0/0:13,0:13:36.05:0,36,345	0/0:14,0:14:18.02:0,18,174	0/0:21,0:21:57.09:0,57,550	0/0:19,0:19:54.07:0,54,517	0/0:40,0:40:99:0,108,1015	0/0:21,0:21:51.07:0,51,492	0/0:18,0:18:54.08:0,54,516	1/1:3,18:21:42.13:507,42,0	1/1:2,18:20:39.12:471,39,0	1/1:4,6:10:18.04:203,18,0	1/1:2,14:16:35.96:380,36,0	1/1:4,27:32:69.19:819,69,0	0/0:13,0:13:26.93:0,27,247	0/0:8,0:8:18.02:0,18,174	0/0:17,0:17:42.05:0,42,399	0/0:13,0:13:27.02:0,27,252	1/1:4,10:15:30.09:362,30,0	1/1:1,8:9:17.73:217,18,0	1/1:2,4:6:6.02:72,6,0
chr10	108809777	.	TGGCTGCCCATCCACA	T	10209.02	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.516;DP=522;FS=1.461;HRun=0;HaplotypeScore=210.3089;InbreedingCoeff=0.9840;MQ=85.68;MQ0=1;MQRankSum=-11.758;QD=59.01;ReadPosRankSum=1.583;VQSLOD=4.3800;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,28:34:48.16:1856,48,0	0/0:7,0:7:21.07:0,21,1265	0/0:28,0:28:72.01:0,72,3187	0/0:15,0:15:37.37:0,37,1949	0/0:12,0:12:26.89:0,27,1420	0/0:11,0:11:33.11:0,33,2311	0/0:42,0:42:99:0,114,6832	1/1:8,9:17:27.09:778,27,0	0/0:23,0:23:60.21:0,60,4321	0/0:19,0:19:48.16:0,48,2752	0/0:8,0:8:24.08:0,24,1236	0/0:24,0:24:66.20:0,66,4179	0/0:35,0:35:96.31:0,96,6477	0/0:26,0:26:78.27:0,78,5288	0/0:14,0:14:42.14:0,42,2712	0/0:20,0:20:51.18:0,51,3555	1/1:2,12:14:21.07:873,21,0	1/1:3,14:17:27.09:1195,27,0	1/1:3,5:8:15.05:583,15,0	1/1:5,10:15:18.06:796,18,0	1/1:8,13:20:12.04:437,12,0	0/0:10,0:10:21.06:0,21,1017	0/0:10,0:10:21.07:0,21,1228	0/0:26,0:26:75.22:0,75,4950	0/0:18,0:18:45.15:0,45,2698	1/1:6,11:17:33.09:1300,33,0	1/1:6,20:26:42.14:1859,42,0	1/1:0,4:4:12.04:531,12,0
chr10	108810116	.	C	CAG	2280	PASS	AB=0.806;AC=13;AF=0.232;AN=56;BaseQRankSum=6.653;DP=741;FS=11.990;HRun=0;HaplotypeScore=159.3472;InbreedingCoeff=-0.3232;MQ=49.51;MQ0=9;MQRankSum=-5.589;QD=5.67;ReadPosRankSum=2.380;VQSLOD=2.4265;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,20:45:35.84:36,0,105	0/0:7,0:7:20.86:0,21,198	0/0:29,0:14:41.93:0,42,394	0/0:35,0:22:50.75:0,51,456	0/0:11,0:11:4.49:0,4,47	0/0:31,0:31:2.54:0,3,243	0/0:35,0:35:20.56:0,21,364	0/1:25,18:34:99:514,0,285	0/1:30,0:30:57.83:58,0,121	0/0:16,0:16:48.08:0,48,602	0/0:11,0:11:33.07:0,33,444	0/1:17,0:14:6.80:7,0,77	0/0:15,0:14:35.88:0,36,234	0/0:23,0:23:12.85:0,13,97	0/0:32,0:30:14.46:0,14,197	0/0:28,0:28:81.01:0,81,940	0/1:22,12:34:99:149,0,122	0/1:16,6:22:99:143,0,196	0/1:19,5:21:99:294,0,177	0/1:18,10:29:47.16:47,0,124	0/1:48,4:52:99:206,0,221	0/0:27,0:27:18.73:0,19,154	0/0:12,0:12:14.98:0,15,123	0/0:27,0:24:10.31:0,10,155	0/1:31,0:31:34.10:34,0,211	0/1:16,16:32:99:619,0,227	0/1:25,12:37:99:234,0,327	0/1:3,3:6:51.87:90,0,52
chr10	108810120	.	C	CAG	2147.18	PASS	AB=0.997;AC=18;AF=0.321;AN=56;BaseQRankSum=10.149;DP=753;FS=7.376;HRun=0;HaplotypeScore=167.4403;InbreedingCoeff=0.2501;MQ=48.95;MQ0=10;MQRankSum=-5.581;QD=4.90;ReadPosRankSum=5.796;VQSLOD=2.1319;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:44,2:46:16.57:140,17,0	0/0:7,0:7:17.93:0,18,178	0/0:30,0:14:38.75:0,39,325	0/0:36,0:21:28.65:0,29,390	0/0:15,0:15:10.47:0,10,94	0/1:28,0:28:0.45:0,0,220	0/0:35,0:35:20.55:0,21,363	0/1:44,0:35:99:288,0,109	0/1:30,0:30:67.17:67,0,99	0/0:17,0:17:48.08:0,48,602	0/0:12,0:12:36.05:0,36,468	0/1:18,0:15:19.13:19,0,105	0/0:16,0:15:38.93:0,39,258	0/0:22,0:22:9.85:0,10,70	0/0:27,0:25:7.91:0,8,149	0/0:30,0:30:87.03:0,87,994	0/1:32,1:32:1.47:168,0,1	1/1:21,1:22:4.21:267,4,0	0/1:25,0:22:44.33:235,0,44	0/1:31,0:31:1.13:94,0,1	0/1:52,0:52:6.16:189,0,6	0/0:28,0:28:16.42:0,16,148	0/0:14,0:14:17.98:0,18,149	0/0:26,0:23:6.34:0,6,132	0/1:33,0:33:30.77:31,0,237	0/1:33,0:33:36.07:284,0,36	1/1:35,1:36:53.24:438,53,0	1/1:7,0:7:14.71:100,15,0
chr10	108810122	.	C	CACACAGACACACAGACACAG	19505.85	PASS	AB=0.991;AC=17;AF=0.304;AN=56;BaseQRankSum=2.264;DP=757;FS=0.784;HRun=0;HaplotypeScore=356.5735;InbreedingCoeff=-0.0269;MQ=48.90;MQ0=10;MQRankSum=-6.524;QD=44.13;ReadPosRankSum=5.520;VQSLOD=2.6101;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:45,2:47:26.97:2275,0,27	0/0:6,0:6:18.05:0,18,387	0/0:32,0:15:26.94:0,27,335	0/0:36,0:21:19.39:0,19,487	0/0:15,0:15:12.88:0,13,124	0/0:28,0:28:38.93:0,39,526	0/0:37,0:37:46.32:0,46,616	0/1:45,0:36:8.96:1398,0,9	0/0:29,0:29:13.49:0,13,614	0/0:16,0:16:42.12:0,42,1491	0/0:12,0:12:36.09:0,36,1271	0/1:19,0:16:99:296,0,102	0/1:17,0:16:99:171,0,301	0/1:22,0:22:35.20:97,0,35	0/1:29,0:27:99:253,0,210	0/0:30,0:30:81.17:0,81,2667	0/1:32,1:32:25.54:2420,0,26	0/1:20,1:21:19.33:2171,0,19	0/1:25,0:22:11.05:2143,0,11	0/1:31,0:31:6.89:835,0,7	0/1:51,0:51:34.95:687,0,35	0/1:28,0:28:30.29:30,0,203	0/0:15,0:15:15.91:0,16,195	0/0:26,0:23:11.87:0,12,294	0/0:33,0:33:59.81:0,60,1016	1/1:32,0:32:76.46:3047,76,0	1/1:34,1:35:25.33:3331,25,0	0/1:7,0:7:3.10:351,0,3
chr10	108810457	.	GC	G	10010.36	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=18.454;DP=696;FS=2.850;HRun=1;HaplotypeScore=90.3825;InbreedingCoeff=0.9988;MQ=91.45;MQ0=0;MQRankSum=-2.785;QD=38.21;ReadPosRankSum=1.241;VQSLOD=5.3412;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:42:99:1588,114,0	0/0:12,0:12:36.09:0,36,525	0/0:25,0:26:75.25:0,75,1179	0/0:31,0:31:80.95:0,81,1294	0/0:15,0:15:42.14:0,42,665	0/0:28,0:28:84.26:0,84,1286	0/0:29,0:29:87.25:0,87,1354	1/1:0,32:32:90.30:1247,90,0	0/0:25,0:25:75.26:0,75,1193	0/0:36,0:36:99:0,108,1695	0/0:17,0:17:51.15:0,51,763	0/0:26,0:26:78.27:0,78,1247	0/0:21,0:21:60.20:0,60,959	0/0:25,0:25:75.26:0,75,1196	0/0:24,0:24:72.23:0,72,1127	0/0:21,0:21:63.20:0,63,981	1/1:0,32:32:90.30:1256,90,0	1/1:0,22:22:66.22:923,66,0	1/1:0,21:21:63.16:825,63,0	1/1:0,22:22:51.13:691,51,0	1/1:0,34:34:99:1385,99,0	0/0:26,0:26:69.22:0,69,1076	0/0:21,0:21:63.20:0,63,980	0/0:28,0:28:84.29:0,84,1339	0/0:23,0:23:69.22:0,69,1076	1/1:0,20:20:60.20:838,60,0	1/1:0,29:29:72.24:1007,72,0	1/1:0,8:8:18.06:252,18,0
chr10	108813130	.	CA	C	552.03	PASS	AB=0.871;AC=18;AF=0.321;AN=56;BaseQRankSum=0.839;DP=351;FS=5.483;HRun=14;HaplotypeScore=66.6141;InbreedingCoeff=0.6040;MQ=59.60;MQ0=10;MQRankSum=2.909;QD=5.75;ReadPosRankSum=4.938;VQSLOD=2.3627;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:22:26.16:0,26,139	0/1:8,1:9:1.30:1,0,141	0/0:8,0:7:15.99:0,16,90	0/0:7,1:5:9.78:0,10,65	0/0:24,3:25:19.21:0,19,426	0/1:6,1:7:2.57:3,0,118	0/0:11,0:9:17.97:0,18,159	0/0:13,0:18:38.14:0,38,240	0/0:7,0:7:6.89:0,7,58	0/1:15,4:19:46.53:47,0,155	0/0:15,0:13:26.81:0,27,225	1/1:3,9:12:23.79:164,24,0	1/1:0,2:3:8.85:57,9,0	1/1:2,9:11:29.74:205,30,0	1/1:4,5:11:14.84:103,15,0	0/1:6,1:7:11.62:12,0,38	0/0:10,0:21:25.78:0,26,136	0/0:7,0:15:5.82:0,6,36	0/0:6,0:10:28.84:0,29,160	0/0:10,0:15:32.01:0,32,195	0/0:3,0:3:4.99:0,5,25	1/1:0,3:4:8.92:62,9,0	1/1:2,4:6:8.91:62,9,0	1/1:4,2:4:2.96:20,3,0	0/0:18,0:18:43.19:0,43,373	0/0:14,0:22:52.39:0,52,304	0/0:21,0:20:32.08:0,32,194	0/0:2,0:7:9.88:0,10,47
chr10	108813589	.	GACCTTTGA	G	13823.32	PASS	AB=0.523;AC=19;AF=0.339;AN=56;BaseQRankSum=16.665;DP=590;FS=13.031;HRun=0;HaplotypeScore=153.2692;InbreedingCoeff=0.9135;MQ=76.68;MQ0=0;MQRankSum=-15.004;QD=61.71;ReadPosRankSum=0.056;VQSLOD=4.1370;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,41:43:81.28:2282,81,0	0/0:11,0:11:30.10:0,30,1342	0/0:19,0:18:45.13:0,45,1606	0/0:18,0:18:51.17:0,51,1951	0/0:29,0:29:81.28:0,81,3539	0/0:28,0:28:84.27:0,84,3648	0/0:12,0:12:36.10:0,36,1499	1/1:3,20:23:57.18:1458,57,0	0/0:22,0:22:66.23:0,66,2814	0/0:20,0:20:60.21:0,60,2411	0/0:26,0:26:78.27:0,78,3472	0/0:21,0:21:63.22:0,63,2732	0/0:21,0:21:63.21:0,63,2603	0/0:16,0:16:48.16:0,48,2106	0/0:28,0:28:84.28:0,84,3584	0/0:16,0:16:45.15:0,45,1948	1/1:3,9:12:21.07:602,21,0	1/1:2,13:15:18.06:516,18,0	1/1:4,19:23:57.20:1450,57,0	1/1:1,31:32:84.29:2409,84,0	1/1:0,10:10:12.04:344,12,0	0/0:26,0:26:75.26:0,75,3190	0/0:23,0:23:69.24:0,69,2939	0/0:16,0:16:45.15:0,45,1918	0/0:14,0:14:42.14:0,42,1733	0/1:2,21:23:68.04:1577,0,68	1/1:0,26:26:75.26:2151,75,0	1/1:0,17:17:36.12:1033,36,0
chr10	108821563	.	G	GCA	1811.82	PASS	AB=0.772;AC=6;AF=0.107;AN=56;BaseQRankSum=0.182;DP=789;FS=0.544;HRun=0;HaplotypeScore=251.8712;InbreedingCoeff=0.3080;MQ=50.06;MQ0=12;MQRankSum=2.734;QD=12.94;ReadPosRankSum=4.856;VQSLOD=3.2711;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:23.84:0,24,312	0/0:10,0:9:21.07:0,21,298	0/0:30,0:11:23.05:0,23,218	0/0:33,0:13:22.40:0,22,201	1/1:14,6:19:5.94:317,6,0	0/1:12,6:19:11.01:326,0,11	0/1:37,8:45:2.93:538,0,3	0/0:32,0:29:72.15:0,72,902	0/1:25,11:36:55.93:481,0,56	0/0:30,0:29:81.27:0,81,1133	0/0:18,0:18:51.17:0,51,707	0/0:41,0:41:93.06:0,93,1106	0/0:31,0:31:54.09:0,54,602	0/0:29,0:29:32.62:0,33,401	0/0:31,0:31:35.91:0,36,453	0/0:42,0:41:99:0,102,1424	0/0:22,0:22:54.10:0,54,612	0/0:17,0:16:36.59:0,37,475	0/0:18,0:16:37.22:0,37,395	0/0:30,0:30:41.93:0,42,552	0/0:45,0:43:51.14:0,51,674	0/0:17,0:17:21.04:0,21,279	0/0:18,0:18:14.93:0,15,190	0/0:34,0:33:48.14:0,48,630	0/1:13,7:20:29.96:273,0,30	0/0:43,0:43:99:0,126,1514	0/0:24,0:24:60.17:0,60,756	0/0:17,0:17:48.14:0,48,604
chr10	108821567	.	GCACACACA	G	4693.06	PASS	AB=0.773;AC=26;AF=0.464;AN=56;BaseQRankSum=5.314;DP=779;FS=1.387;HRun=0;HaplotypeScore=303.5748;InbreedingCoeff=0.3178;MQ=48.48;MQ0=17;MQRankSum=-7.943;QD=10.01;ReadPosRankSum=1.057;VQSLOD=3.0578;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,1:35:5:46,5,0	0/0:9,0:8:15.05:0,15,538	0/0:32,0:10:2.97:0,3,20	0/0:37,0:11:0:0,0,0	0/0:19,0:18:32.86:0,33,905	0/0:20,0:20:31.89:0,32,943	0/0:44,0:44:61.29:0,61,1388	0/1:26,0:28:51.64:52,0,105	0/0:33,0:33:63.16:0,63,1651	0/0:31,0:30:57.09:0,57,1643	0/0:18,0:19:35.54:0,36,1021	1/1:23,16:40:60.19:1409,60,0	1/1:10,20:30:38.99:840,39,0	1/1:7,23:30:14.53:329,15,0	1/1:11,18:29:24.59:445,25,0	0/0:34,0:42:96.27:0,96,3374	0/1:17,1:23:74.85:132,0,75	0/1:13,0:16:40.92:41,0,91	0/1:10,0:12:47.09:47,0,69	0/1:13,1:30:29.98:89,0,30	0/1:37,0:46:32.37:34,0,32	1/1:9,7:16:6:156,6,0	1/1:6,9:15:5.56:47,6,0	1/1:25,6:31:11.87:298,12,0	0/0:22,0:22:39.99:0,40,1041	1/1:23,2:41:6.55:441,7,0	0/1:15,1:22:37.02:140,0,37	0/1:9,1:16:9.09:147,0,9
chr10	108821608	.	TCACACA	T	4120.26	PASS	AB=0.656;AC=25;AF=0.446;AN=56;BaseQRankSum=2.818;DP=896;FS=6.949;HRun=0;HaplotypeScore=309.5145;InbreedingCoeff=0.6365;MQ=42.46;MQ0=56;MQRankSum=-3.954;QD=10.54;ReadPosRankSum=0.910;VQSLOD=1.4504;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,29:37:1.79:11,2,0	0/0:9,0:8:18.06:0,18,534	0/0:70,0:12:12.04:0,12,284	0/0:75,0:10:5.15:0,5,104	1/1:9,0:19:4.38:8,4,0	0/0:10,0:24:2.65:0,3,25	0/1:17,0:39:16.68:17,0,29	1/1:23,14:30:0.44:711,0,0	0/1:15,0:32:10.39:63,0,10	0/0:34,0:31:63.08:0,63,1695	0/0:16,0:16:39.12:0,39,1174	0/0:10,0:39:43.68:0,44,612	0/0:9,0:35:39.02:0,39,504	0/0:18,0:28:38.01:0,38,502	0/0:10,0:41:35.72:0,36,456	0/0:41,0:40:84.27:0,84,2491	0/1:12,10:23:2.78:195,0,3	1/1:7,8:14:12.05:294,12,0	1/1:12,9:14:30.96:525,31,0	1/1:6,25:31:10.52:146,11,0	1/1:25,19:47:3.09:13,3,0	0/0:5,0:29:34.68:0,35,475	0/0:7,0:17:14.86:0,15,195	0/0:13,0:35:17.54:0,18,283	1/1:7,2:21:7.07:27,7,0	1/1:17,19:32:51.17:1090,51,0	1/1:4,16:20:30.10:621,30,0	1/1:3,7:10:21.03:398,21,0
chr10	108822395	.	TG	T	4601.78	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=5.462;DP=435;FS=49.014;HRun=3;HaplotypeScore=88.6843;InbreedingCoeff=0.9603;MQ=83.39;MQ0=10;MQRankSum=-11.158;QD=22.78;ReadPosRankSum=-0.360;VQSLOD=1.4009;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,4:6:17.92:166,18,0	0/0:11,0:11:33.11:0,33,474	0/0:54,0:30:60.30:0,60,607	0/0:46,0:21:33.71:0,34,332	0/0:20,0:20:54.38:0,54,643	0/0:17,0:17:48.06:0,48,601	0/0:14,0:14:39.10:0,39,493	1/1:10,7:17:36.05:355,36,0	0/0:6,0:6:15.05:0,15,197	0/0:14,0:14:39.12:0,39,540	0/0:14,0:14:39.10:0,39,536	1/1:2,6:8:21.04:229,21,0	1/1:4,6:10:27.06:292,27,0	1/1:2,5:6:15.05:182,15,0	1/1:6,11:17:45.03:477,45,0	0/0:13,0:13:36.10:0,36,498	1/1:8,5:13:26.81:263,27,0	1/1:1,3:4:11.70:113,12,0	1/1:0,15:15:44.77:425,45,0	1/1:4,9:12:27:269,27,0	1/1:1,11:12:20.95:190,21,0	1/1:0,18:18:47.78:433,48,0	1/1:0,10:10:23.93:237,24,0	1/1:2,4:6:11.95:120,12,0	0/0:18,0:18:50.74:0,51,614	1/1:4,15:19:3.89:369,4,0	1/1:6,6:12:29.97:302,30,0	1/1:0,15:15:18.02:180,18,0
chr10	108822409	.	C	CT	877.04	PASS	AB=0.743;AC=13;AF=0.232;AN=56;BaseQRankSum=5.145;DP=432;FS=9.715;HRun=0;HaplotypeScore=106.2537;InbreedingCoeff=-0.0355;MQ=77.76;MQ0=21;MQRankSum=-5.547;QD=7.50;ReadPosRankSum=1.560;VQSLOD=3.1910;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:1,4:4:3.04:44,0,3	0/0:10,0:10:30.10:0,30,419	0/0:80,0:34:45.76:0,46,672	0/0:78,0:28:40.26:0,40,385	0/0:19,0:19:53.04:0,53,532	0/0:15,0:15:39.10:0,39,491	0/0:12,0:11:32.26:0,32,332	0/1:7,6:13:24:141,0,24	0/0:5,0:5:14.62:0,15,133	0/0:16,0:15:48.02:0,48,639	0/0:12,0:12:36.10:0,36,461	0/1:6,0:6:12.19:12,0,30	0/1:6,0:5:8.55:9,0,18	0/0:4,0:3:7.43:0,7,41	0/0:11,0:11:27.03:0,27,120	0/0:13,0:13:39.12:0,39,529	0/1:8,5:12:26.68:116,0,27	0/1:4,2:6:23.36:23,0,24	0/1:8,6:13:11.19:127,0,11	0/1:6,4:8:10.28:75,0,10	0/1:4,2:6:8.22:46,0,8	0/0:9,0:9:19.75:0,20,93	0/0:6,0:6:0.11:0,0,32	0/0:3,0:3:5.63:0,6,24	0/0:21,0:21:62.50:0,62,698	0/1:10,11:21:12.66:258,0,13	0/1:4,5:9:13.22:77,0,13	1/1:4,4:8:10.20:102,10,0
chr10	108822421	.	A	AT	314.76	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=3.691;DP=404;FS=0.885;HRun=9;HaplotypeScore=87.6495;InbreedingCoeff=0.7843;MQ=65.64;MQ0=20;MQRankSum=-5.211;QD=7.87;ReadPosRankSum=-0.473;VQSLOD=1.6957;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:5:8.54:0,9,52	0/0:11,0:11:32.99:0,33,286	0/0:60,2:20:9.62:0,10,111	0/0:64,0:21:15.79:0,16,103	0/0:13,0:13:38.37:0,38,299	0/0:15,0:15:35.99:0,36,311	0/0:9,0:8:17.99:0,18,156	0/0:17,0:18:32.28:0,32,215	0/0:5,0:5:11.97:0,12,98	0/0:18,0:17:47.95:0,48,409	0/0:13,0:13:26.99:0,27,234	1/1:2,2:4:6.01:60,6,0	1/1:4,1:4:3.01:33,3,0	1/1:2,3:4:9.02:99,9,0	1/1:4,5:9:9.02:99,9,0	0/0:13,0:13:38.99:0,39,338	0/0:14,0:13:8.55:0,9,158	0/0:9,0:9:22.80:0,23,183	0/0:16,0:15:32.38:0,32,224	0/0:8,0:6:5.11:0,5,26	0/0:6,0:6:11.49:0,11,76	1/1:4,1:5:4.83:39,5,0	1/1:3,3:6:11.99:116,12,0	1/1:3,3:6:3.01:33,3,0	0/0:22,0:22:32.18:0,32,396	0/0:21,0:21:35.27:0,35,264	0/0:10,0:10:20.45:0,20,137	0/0:8,0:8:14.11:0,14,78
chr10	108822612	.	G	GT	8080.31	PASS	AB=0.601;AC=32;AF=0.571;AN=56;BaseQRankSum=-8.112;DP=577;FS=6.865;HRun=9;HaplotypeScore=56.7745;InbreedingCoeff=0.8248;MQ=68.16;MQ0=4;MQRankSum=-3.274;QD=22.76;ReadPosRankSum=-0.682;VQSLOD=5.3653;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,28:33:20.05:664,20,0	0/0:7,0:7:21:0,21,182	0/0:23,0:19:29.70:0,30,242	0/0:14,0:12:9.82:0,10,135	0/0:23,0:23:68.99:0,69,599	0/0:28,0:27:65.96:0,66,570	0/0:20,0:20:53.93:0,54,459	1/1:10,25:36:51.14:803,51,0	0/0:22,0:22:50.99:0,51,443	0/0:17,0:18:14.81:0,15,292	0/0:16,0:15:41.96:0,42,357	1/1:2,15:17:39.11:431,39,0	1/1:0,15:16:41.95:446,42,0	1/1:1,24:25:60.14:653,60,0	1/1:3,19:22:45.12:498,45,0	0/0:34,0:34:83.97:0,84,729	1/1:3,28:31:63.17:697,63,0	1/1:2,14:16:42.07:451,42,0	1/1:6,12:18:13.03:357,13,0	1/1:2,8:10:24.06:258,24,0	1/1:4,19:23:11.06:577,11,0	1/1:0,14:14:42.11:465,42,0	0/1:4,5:8:8.01:145,0,8	1/1:10,17:28:14.25:343,14,0	0/0:16,0:16:41.96:0,42,361	0/1:4,15:18:7:386,0,7	1/1:2,14:17:1.71:441,2,0	1/1:4,15:19:42.11:465,42,0
chr10	108824741	.	CT	C	10006.75	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=19.676;DP=798;FS=10.213;HRun=3;HaplotypeScore=113.1476;InbreedingCoeff=0.9997;MQ=84.39;MQ0=0;MQRankSum=-3.175;QD=33.03;ReadPosRankSum=1.722;VQSLOD=3.8374;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,42:44:99:1375,111,0	0/0:9,0:9:24.07:0,24,327	0/0:27,0:27:72.17:0,72,957	0/0:21,0:21:51.92:0,52,675	0/0:20,0:20:60.19:0,60,847	0/0:22,0:22:66.22:0,66,950	0/0:31,0:31:90.29:0,90,1276	1/1:4,29:33:84.24:1015,84,0	0/0:34,0:34:99:0,102,1432	0/0:29,0:29:84.27:0,84,1180	0/0:20,0:20:60.20:0,60,864	0/0:37,0:37:99:0,108,1535	0/0:35,0:35:99:0,105,1470	0/0:41,0:41:99:0,123,1735	0/0:28,0:28:84.25:0,84,1158	0/0:28,0:28:84.25:0,84,1159	1/1:1,26:27:66.21:818,66,0	1/1:0,34:34:93.29:1153,93,0	1/1:0,19:19:57.18:706,57,0	1/1:0,26:26:75.19:912,75,0	1/1:2,62:64:99:2045,166,0	0/0:27,0:27:78.24:0,78,1087	0/0:21,0:21:57.19:0,57,808	0/0:33,0:33:96.23:0,96,1288	0/0:32,0:32:93.30:0,93,1315	1/1:1,24:25:47.27:830,47,0	1/1:0,17:17:51.16:632,51,0	1/1:0,14:14:42.13:520,42,0
chr10	108825529	.	G	GTGCTCCTGC	897.01	PASS	AB=0.900;AC=5;AF=0.417;AN=12;BaseQRankSum=-1.092;DP=281;FS=0.000;HRun=0;HaplotypeScore=14.9013;MQ=12.48;MQ0=187;MQRankSum=0.817;QD=20.86;ReadPosRankSum=0.212;VQSLOD=1.3935;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/0:15,0:2:3.01:0,3,87	./.	1/1:16,5:9:18.06:813,18,0	./.	./.	1/1:13,0:5:3.01:34,3,0	./.	0/0:8,0:7:3.48:0,3,88	./.	./.	./.	./.	./.	./.	./.	./.	0/1:8,1:3:99:132,0,165	0/0:6,0:3:3.01:0,3,38	./.
chr10	108825587	.	G	GTGCTCCTGC	739.13	PASS	AB=0.821;AC=8;AF=0.400;AN=20;BaseQRankSum=-2.141;DP=355;FS=0.000;HRun=0;HaplotypeScore=16.2109;InbreedingCoeff=0.2522;MQ=13.16;MQ0=213;MQRankSum=-0.380;QD=17.60;ReadPosRankSum=-0.529;VQSLOD=0.8310;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:13,0:2:3.01:0,3,87	./.	./.	./.	0/1:11,0:1:0:0,0,0	./.	./.	./.	./.	./.	0/0:22,0:2:2.98:0,3,21	./.	0/0:32,0:2:0:0,0,0	0/0:20,0:2:6.02:0,6,117	0/0:10,0:3:0:0,0,0	./.	1/1:3,2:2:6.02:251,6,0	./.	./.	./.	./.	./.	./.	./.	1/1:14,0:2:2.99:23,3,0	0/1:4,3:6:74.91:408,0,75	1/1:1,1:3:3.01:141,3,0
chr10	108826803	.	G	GTGCTCCTGC	1916.62	PASS	AB=0.875;AC=12;AF=0.600;AN=20;BaseQRankSum=-3.876;DP=341;FS=0.000;HRun=0;HaplotypeScore=17.7915;InbreedingCoeff=0.3654;MQ=11.70;MQ0=201;MQRankSum=2.504;QD=34.23;ReadPosRankSum=2.922;VQSLOD=2.5370;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	1/1:8,2:5:12.04:487,12,0	./.	0/0:26,0:5:15.05:0,15,369	./.	./.	0/0:27,0:1:2.97:0,3,20	./.	0/1:15,0:1:0:0,0,0	0/0:35,0:13:0:0,0,0	./.	./.	1/1:5,3:4:9.03:421,9,0	./.	1/1:4,2:4:2.51:140,3,0	./.	./.	./.	./.	0/1:4,2:4:99:270,0,162	1/1:3,6:7:10.54:560,11,0	1/1:2,0:2:3.01:132,3,0
chr10	108826861	.	G	GTGCTCCTGC	542.78	PASS	AB=0.958;AC=6;AF=0.200;AN=30;BaseQRankSum=-1.923;DP=437;FS=0.000;HRun=0;HaplotypeScore=29.7822;InbreedingCoeff=0.2104;MQ=22.29;MQ0=113;MQRankSum=-0.912;QD=13.24;ReadPosRankSum=-0.070;VQSLOD=1.0511;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	0/0:18,0:6:9.02:0,9,200	./.	0/0:2,0:2:6.02:0,6,164	0/0:21,0:7:8.99:0,9,188	0/0:34,0:16:45.15:0,45,1199	0/0:27,0:16:12.03:0,12,251	0/0:31,0:19:15.03:0,15,360	0/0:16,0:5:5.95:0,6,105	0/0:32,0:17:6.02:0,6,168	0/0:17,0:5:2.81:0,3,87	./.	./.	./.	0/1:10,1:3:99:132,0,165	./.	1/1:6,0:3:0.78:2,1,0	./.	./.	0/0:38,0:17:12.04:0,12,307	0/0:28,0:12:3.01:0,3,81	0/1:14,0:6:84.75:85,0,197	1/1:7,2:6:9.02:421,9,0	./.
chr10	108826918	.	TGTGCTCCTGCTGGTGTGACTCTCAGTGAG	T	272.07	PASS	AB=1.000;AC=11;AF=0.229;AN=48;BaseQRankSum=5.785;DP=621;FS=0.939;HRun=0;HaplotypeScore=188.4127;InbreedingCoeff=0.7166;MQ=81.64;MQ0=73;MQRankSum=-0.915;QD=2.86;ReadPosRankSum=0.722;VQSLOD=2.5536;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:5:0:0,0,0	0/0:10,0:8:12.43:0,12,155	0/0:34,0:28:42.69:0,43,335	0/0:49,0:36:43.59:0,44,400	0/1:10,0:6:0:0,0,0	0/0:22,0:18:21.03:0,21,260	0/0:44,0:24:13.62:0,14,151	0/1:9,0:2:0:0,0,0	0/0:28,0:19:33.07:0,33,427	0/0:22,0:11:27.01:0,27,385	0/0:16,0:8:14.94:0,15,116	0/0:44,0:39:53.70:0,54,651	0/0:25,0:19:34.93:0,35,480	0/0:41,0:32:36.09:0,36,486	0/0:18,0:15:27.55:0,28,387	0/0:20,0:18:30.10:0,30,413	1/1:9,0:3:3.01:37,3,0	./.	1/1:19,6:10:11.51:114,12,0	1/1:2,9:7:2.88:18,3,0	0/0:26,0:13:0.47:0,0,1	./.	0/0:15,0:9:9.03:0,9,149	0/0:45,0:33:41.96:0,42,559	0/0:26,0:16:8.33:0,8,222	1/1:6,12:10:17.93:231,18,0	./.	./.
chr10	108827739	.	A	ATT	3105.39	PASS	AB=0.926;AC=36;AF=0.643;AN=56;BaseQRankSum=4.161;DP=566;FS=3.499;HRun=15;HaplotypeScore=99.9794;InbreedingCoeff=0.6288;MQ=65.04;MQ0=6;MQRankSum=-5.976;QD=8.19;ReadPosRankSum=-4.254;VQSLOD=0.5017;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,14:34:33.57:344,34,0	0/1:7,1:9:26.60:30,0,27	0/1:22,0:11:0.56:1,0,15	0/1:22,0:14:23.30:23,0,25	0/0:34,0:37:39.74:0,40,407	0/0:26,0:32:43:0,43,369	0/0:27,0:33:55.21:0,55,444	0/1:22,3:27:27.16:152,0,27	0/0:18,0:20:31.91:0,32,236	0/0:21,0:21:38.74:0,39,305	0/0:13,0:15:14.61:0,15,150	1/1:11,0:11:6.63:21,7,0	1/1:14,0:15:5.91:45,6,0	1/1:15,0:18:38.26:349,38,0	1/1:21,0:25:39.33:368,39,0	0/0:17,0:18:31.63:0,32,241	1/1:17,10:33:14.45:287,14,0	1/1:11,6:19:12.92:148,13,0	1/1:7,1:10:11.39:113,11,0	1/1:16,10:28:11.23:294,11,0	1/1:3,1:5:6.63:50,7,0	1/1:15,0:17:15.76:129,16,0	1/1:11,0:17:14.90:137,15,0	1/1:18,0:18:8.64:92,9,0	0/0:8,0:10:14.33:0,14,93	1/1:11,3:15:25.56:243,26,0	1/1:13,4:21:26.57:294,27,0	1/1:5,4:9:1.92:187,2,0
chr10	108828622	.	G	GT	4951.51	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-12.580;DP=576;FS=0.801;HRun=1;HaplotypeScore=62.8910;InbreedingCoeff=0.9990;MQ=80.78;MQ0=0;MQRankSum=-1.954;QD=37.51;ReadPosRankSum=2.970;VQSLOD=5.3677;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.20:0,90,1081	0/0:14,0:14:42.14:0,42,540	0/0:19,0:19:57.17:0,57,707	0/0:22,0:22:59.53:0,60,661	0/0:26,0:26:69.17:0,69,847	0/0:17,0:17:51.17:0,51,661	0/0:17,0:17:51.14:0,51,632	0/0:33,0:33:96.27:0,96,1176	0/0:25,0:25:75.24:0,75,973	0/0:21,0:21:63.20:0,63,813	0/0:11,0:11:30.10:0,30,388	1/1:0,17:17:48.16:718,48,0	1/1:2,21:23:60.20:896,60,0	1/1:0,17:17:48.16:719,48,0	1/1:0,13:13:30.10:450,30,0	0/0:29,0:29:87.28:0,87,1128	0/0:22,0:22:63.13:0,63,771	0/0:19,0:19:57.17:0,57,724	0/0:15,0:15:42.12:0,42,531	0/0:25,0:25:72.21:0,72,913	0/0:25,0:25:75.23:0,75,955	1/1:3,19:22:54.18:805,54,0	1/1:0,24:24:60.02:870,60,0	1/1:0,16:16:33.11:494,33,0	0/0:19,0:19:57.11:0,57,666	0/0:21,0:21:63.20:0,63,803	0/0:22,0:22:66.21:0,66,855	0/0:10,0:10:21.07:0,21,272
chr10	108829599	.	C	CT	4352.27	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.790;DP=653;FS=4.224;HRun=1;HaplotypeScore=73.0607;InbreedingCoeff=0.9979;MQ=74.08;MQ0=0;MQRankSum=-0.363;QD=41.45;ReadPosRankSum=0.426;VQSLOD=5.2465;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:66:99:0,196,2696	0/0:6,0:6:18.06:0,18,251	0/0:22,0:22:66.18:0,66,870	0/0:15,0:14:41.62:0,42,526	1/1:0,26:26:72.24:1076,72,0	1/1:0,22:22:63.21:942,63,0	1/1:0,17:17:45.15:672,45,0	0/0:28,0:28:77.78:0,78,957	1/1:0,22:22:60.20:899,60,0	0/0:38,0:38:99:0,114,1562	0/0:16,0:16:45.15:0,45,629	0/0:22,0:22:66.22:0,66,914	0/0:19,0:19:57.17:0,57,773	0/0:22,0:22:66.22:0,66,920	0/0:24,0:24:69.21:0,69,932	0/0:21,0:21:57.19:0,57,795	0/0:23,0:23:66.20:0,66,900	0/0:15,0:15:42.14:0,42,587	0/0:19,0:19:54.18:0,54,748	0/0:30,0:30:90.26:0,90,1235	0/0:28,0:28:78.25:0,78,1072	0/0:27,0:27:81.25:0,81,1096	0/0:16,0:16:48.15:0,48,652	0/0:37,0:37:99:0,105,1456	1/1:0,18:18:51.17:764,51,0	0/0:22,0:22:66.22:0,66,920	0/0:23,0:23:69.21:0,69,940	0/0:9,0:9:27.09:0,27,377
chr10	108829770	.	AGGAC	A	23420.95	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=8.092;DP=571;FS=0.828;HRun=0;HaplotypeScore=113.4396;InbreedingCoeff=0.9889;MQ=90.71;MQ0=0;MQRankSum=-8.781;QD=50.59;ReadPosRankSum=3.534;VQSLOD=5.6694;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:60.21:1257,60,0	0/0:4,0:4:12.04:0,12,348	0/0:27,0:27:81.24:0,81,2123	0/0:26,0:26:72.17:0,72,1921	1/1:0,15:15:42.10:827,42,0	1/1:0,16:16:42.14:874,42,0	1/1:0,32:32:75.26:1546,75,0	1/1:0,32:32:96.26:1747,96,0	1/1:0,19:19:57.20:1195,57,0	0/0:23,0:23:69.24:0,69,1994	0/0:6,0:6:18.06:0,18,521	1/1:0,28:28:72.25:1500,72,0	1/1:0,16:16:39.13:818,39,0	1/1:0,11:11:21.07:440,21,0	1/1:0,20:20:51.18:1069,51,0	0/0:22,0:21:66.23:0,66,1875	1/1:0,30:30:78.27:1635,78,0	1/1:0,19:19:51.18:1060,51,0	1/1:0,21:21:63.18:1223,63,0	1/1:0,10:10:24.04:460,24,0	1/1:0,43:43:93.25:1821,93,0	1/1:0,12:12:33.07:648,33,0	1/1:0,6:6:18.06:377,18,0	1/1:0,35:35:65.69:1373,66,0	1/1:0,10:10:27.09:566,27,0	1/1:0,16:16:48.11:916,48,0	1/1:0,23:23:54.19:1127,54,0	1/1:0,15:15:45.15:944,45,0
chr10	108830066	.	TG	T	3702.77	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=5.705;DP=532;FS=32.705;HRun=1;HaplotypeScore=84.9356;InbreedingCoeff=0.9877;MQ=79.88;MQ0=0;MQRankSum=0.098;QD=35.95;ReadPosRankSum=0.244;VQSLOD=1.3965;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.07:0,69,1006	0/0:10,0:10:30.09:0,30,455	0/0:18,0:18:54.17:0,54,838	0/0:19,0:19:53.64:0,54,808	0/0:28,0:28:66.04:0,66,627	0/0:20,0:20:53.92:0,54,468	0/0:5,0:5:8.98:0,9,76	0/0:35,0:35:99:0,105,1629	0/0:15,0:15:39.04:0,39,374	0/0:25,0:25:72.25:0,72,1150	0/0:17,0:17:48.16:0,48,767	1/1:0,15:15:39.13:544,39,0	1/1:0,14:14:36.12:503,36,0	1/1:0,15:15:42.05:543,42,0	1/1:0,18:18:45.06:585,45,0	0/0:12,0:12:33.04:0,33,497	0/0:19,0:19:57.15:0,57,860	0/0:31,0:31:93.32:0,93,1486	0/0:27,0:27:78.24:0,78,1183	0/0:16,0:16:48.16:0,48,767	0/0:20,0:20:60.03:0,60,850	1/1:0,21:21:60.16:814,60,0	1/1:0,11:11:33.11:461,33,0	1/1:0,9:9:18.06:252,18,0	0/0:22,0:22:53.93:0,54,476	0/0:23,0:23:69.24:0,69,1100	0/0:24,0:24:72.23:0,72,1125	0/0:18,0:18:54.18:0,54,863
chr10	108830098	.	AGCACCGAC	A	5881.42	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.522;DP=632;FS=3.615;HRun=0;HaplotypeScore=187.8120;InbreedingCoeff=0.9962;MQ=81.66;MQ0=0;MQRankSum=-12.198;QD=79.48;ReadPosRankSum=0.737;VQSLOD=5.1678;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.27:0,78,3461	0/0:11,0:11:33.11:0,33,1484	0/0:22,0:22:66.09:0,66,2408	0/0:27,0:27:78.18:0,78,3144	1/1:0,21:21:57.20:1648,57,0	1/1:0,15:15:39.13:1157,39,0	1/1:0,7:7:15.05:453,15,0	0/0:32,0:32:96.32:0,96,3993	1/1:0,16:16:48.16:1451,48,0	0/0:29,0:29:87.29:0,87,3719	0/0:13,0:13:39.13:0,39,1783	0/0:26,0:26:69.24:0,69,3157	0/0:20,0:20:51.18:0,51,2349	0/0:21,0:21:63.22:0,63,2745	0/0:17,0:17:48.16:0,48,2137	0/0:16,0:16:45.15:0,45,2067	0/0:23,0:23:63.20:0,63,2641	0/0:39,0:39:99:0,117,5269	0/0:40,0:40:99:0,117,4975	0/0:20,0:20:60.21:0,60,2763	0/0:37,0:37:99:0,108,4883	0/0:33,0:33:99:0,99,4565	0/0:15,0:15:45.15:0,45,2044	0/0:22,0:22:51.40:0,51,2284	1/1:0,15:15:39.13:1172,39,0	0/0:26,0:26:72.25:0,72,3328	0/0:22,0:22:66.23:0,66,2976	0/0:19,0:19:57.20:0,57,2516
chr10	108830141	.	GGA	G	45.10	PASS	AB=0.786;AC=7;AF=0.130;AN=54;BaseQRankSum=5.225;DP=664;FS=1.453;HRun=0;HaplotypeScore=155.2591;InbreedingCoeff=0.8135;MQ=67.17;MQ0=3;MQRankSum=-3.702;QD=0.72;ReadPosRankSum=-0.848;VQSLOD=2.6161;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:57.03:0,57,905	0/0:10,0:10:27.08:0,27,449	0/0:26,0:19:39.56:0,40,663	0/0:40,0:21:47.16:0,47,545	0/1:16,6:22:0.04:0,0,0	1/1:6,8:13:5.90:37,6,0	1/1:8,3:11:1.73:31,2,0	0/0:30,0:30:78.23:0,78,1300	1/1:13,3:16:10.71:92,11,0	0/0:28,0:28:74.83:0,75,1164	0/0:10,0:9:24.08:0,24,415	0/0:25,0:25:48.09:0,48,742	0/0:26,0:25:51.11:0,51,812	0/0:23,0:23:44.07:0,44,682	0/0:19,0:19:17.99:0,18,284	0/0:18,0:18:45.12:0,45,725	0/0:24,0:24:66.14:0,66,1099	0/0:33,0:33:90.23:0,90,1462	0/0:28,0:28:69.14:0,69,1087	0/0:18,0:18:45.10:0,45,680	0/0:68,0:68:99:0,157,2501	0/0:33,0:33:72.09:0,72,1103	0/0:15,0:15:36.12:0,36,619	0/0:33,0:33:56.99:0,57,903	./.	0/0:21,0:21:60.12:0,60,939	0/0:16,0:16:42.13:0,42,692	0/0:13,0:13:36.06:0,36,575
chr10	108830152	.	GTGTC	G	79.95	PASS	AB=1.000;AC=6;AF=0.115;AN=52;BaseQRankSum=5.482;DP=705;FS=13.360;HRun=0;HaplotypeScore=168.2731;InbreedingCoeff=0.5891;MQ=56.75;MQ0=14;MQRankSum=-1.395;QD=0.92;ReadPosRankSum=-3.201;VQSLOD=0.5911;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:59.86:0,60,1073	0/0:9,0:9:27.02:0,27,535	0/0:25,0:14:32.24:0,32,437	0/1:37,0:15:16.03:16,0,252	./.	1/1:21,1:21:14.99:136,15,0	1/1:13,2:14:6.60:38,7,0	0/0:36,0:34:89.51:0,90,1647	0/1:13,0:12:12.12:14,0,12	0/0:27,0:26:75.14:0,75,1574	0/0:9,0:8:21.04:0,21,441	0/0:26,0:26:50.97:0,51,986	0/0:26,0:24:48:0,48,841	0/0:29,0:29:45.09:0,45,769	0/0:19,0:18:17.93:0,18,272	0/0:18,0:18:42.05:0,42,821	0/0:26,0:26:75.02:0,75,1496	0/0:32,0:32:90.31:0,90,1727	0/0:36,0:31:67.70:0,68,1104	0/0:16,0:16:42.07:0,42,828	0/0:83,0:80:99:0,142,3212	0/0:24,0:24:57.05:0,57,975	0/0:16,0:16:36.02:0,36,575	0/0:41,0:41:68.70:0,69,1291	./.	0/0:21,0:21:57.06:0,57,1026	0/0:16,0:16:47.96:0,48,935	0/0:11,0:11:29.97:0,30,386
chr10	108830154	.	GTC	G	48.51	PASS	AB=1.000;AC=7;AF=0.135;AN=52;BaseQRankSum=6.722;DP=705;FS=20.262;HRun=0;HaplotypeScore=146.9770;InbreedingCoeff=0.7298;MQ=56.61;MQ0=16;MQRankSum=-1.279;QD=0.56;ReadPosRankSum=-2.638;VQSLOD=1.0356;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:20.54:0,21,766	0/0:9,0:9:27.02:0,27,408	0/0:25,0:14:28.60:0,29,409	0/1:36,0:15:7.49:7,0,256	./.	1/1:13,8:20:15.33:109,15,0	1/1:14,2:14:6.22:37,6,0	0/0:36,0:34:74.60:0,75,1264	1/1:9,4:12:2.43:18,2,0	0/0:28,0:27:61.02:0,61,1129	0/0:8,0:7:21.04:0,21,336	0/0:25,0:25:50.94:0,51,775	0/0:25,0:23:48.09:0,48,718	0/0:30,0:30:48.05:0,48,615	0/0:20,0:19:20.76:0,21,235	0/0:16,0:16:42.03:0,42,623	0/0:26,0:26:55.95:0,56,1079	0/0:33,0:33:60.57:0,61,1231	0/0:37,0:30:51.64:0,52,849	0/0:16,0:16:26.37:0,26,588	0/0:86,0:83:74.06:0,74,2193	0/0:23,0:23:44.44:0,44,679	0/0:16,0:16:24.98:0,25,440	0/0:41,0:41:40.78:0,41,911	./.	0/0:20,0:20:46.85:0,47,726	0/0:16,0:16:47.96:0,48,715	0/0:11,0:11:14.31:0,14,319
chr10	108830174	.	CTG	C	111.65	PASS	AB=0.977;AC=12;AF=0.222;AN=54;BaseQRankSum=3.597;DP=786;FS=1.713;HRun=0;HaplotypeScore=136.4684;InbreedingCoeff=-0.0671;MQ=43.90;MQ0=47;MQRankSum=0.120;QD=0.33;ReadPosRankSum=0.764;VQSLOD=2.8264;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:37,1:38:6.99:7,0,261	0/0:9,0:9:19.86:0,20,243	0/0:55,0:5:1.25:0,1,3	0/0:66,0:11:8.96:0,9,78	./.	1/1:25,0:24:0.65:3,1,0	0/0:20,0:18:0.68:0,1,3	0/0:44,0:41:18.95:0,19,654	0/0:17,0:16:1.44:0,1,17	0/0:28,0:26:2.48:0,2,469	0/0:9,0:8:10.96:0,11,238	0/0:23,0:23:10:0,10,152	0/1:28,0:25:19.14:19,0,435	0/1:23,0:22:84.03:84,0,125	0/1:18,0:17:37.67:38,0,82	0/0:13,0:13:16.29:0,16,236	0/1:28,2:29:31.49:31,0,446	0/0:33,1:34:22.35:0,22,715	0/1:41,1:28:27.06:27,0,452	0/0:15,1:15:15.05:0,15,229	0/1:96,2:96:10.93:11,0,949	0/0:17,0:17:6.02:0,6,94	0/0:16,0:15:8.88:0,9,90	0/0:43,0:43:39.86:0,40,535	1/1:14,0:14:0.94:2,1,0	0/1:23,1:23:15.80:16,0,485	0/0:15,0:15:18.29:0,18,359	0/0:8,0:8:8.73:0,9,53
chr10	108830232	.	CTGTCTGTGTGTG	C	4333.20	PASS	AB=0.604;AC=17;AF=0.304;AN=56;BaseQRankSum=7.409;DP=710;FS=2.353;HRun=0;HaplotypeScore=180.4653;InbreedingCoeff=0.7795;MQ=49.24;MQ0=33;MQRankSum=-6.734;QD=22.81;ReadPosRankSum=-1.194;VQSLOD=3.9466;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:33:2.69:39,3,0	0/0:7,0:7:18.06:0,18,681	0/0:57,0:11:13.59:0,14,168	0/0:71,0:12:6.90:0,7,129	0/0:10,0:9:15.05:0,15,580	0/0:19,0:19:38.43:0,38,1140	0/0:23,0:23:30.97:0,31,815	1/1:12,23:34:62.29:890,62,0	0/0:26,0:26:33.31:0,33,963	0/0:19,0:19:45.15:0,45,1644	0/0:7,0:7:18.06:0,18,587	0/0:33,0:33:66.70:0,67,2885	0/0:30,0:30:84.28:0,84,3000	0/0:22,0:21:54.19:0,54,1936	0/0:23,0:22:54.14:0,54,1881	0/0:18,0:18:48.63:0,49,1972	0/1:11,21:31:19.25:155,0,19	1/1:14,2:16:26.51:588,27,0	1/1:10,18:27:59.99:1173,60,0	1/1:4,12:16:3.01:41,3,0	0/0:23,55:78:0.89:0,1,3	0/0:7,0:7:21.07:0,21,869	0/0:10,0:10:24.08:0,24,1198	0/0:45,0:44:84.29:0,84,2888	0/0:14,0:14:27.09:0,27,1021	1/1:13,5:18:30.10:970,30,0	1/1:5,2:7:9.03:317,9,0	1/1:1,4:5:6.02:162,6,0
chr10	108830247	.	T	TGA	2013.44	PASS	AB=0.926;AC=12;AF=0.214;AN=56;BaseQRankSum=8.115;DP=745;FS=1.772;HRun=0;HaplotypeScore=109.9359;InbreedingCoeff=0.2308;MQ=47.16;MQ0=54;MQRankSum=-5.371;QD=11.71;ReadPosRankSum=-0.955;VQSLOD=3.0313;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:3.01:39,3,0	0/0:11,0:10:21.06:0,21,318	0/0:77,0:9:20.87:0,21,213	0/0:92,0:11:7.34:0,7,189	0/0:11,0:10:21.07:0,21,339	0/0:17,0:17:38.78:0,39,634	0/0:20,0:20:33.11:0,33,537	0/1:25,0:24:58.55:556,0,59	0/0:26,0:26:39.01:0,39,605	0/0:20,0:18:53.66:0,54,802	0/0:11,0:9:21.06:0,21,307	0/0:33,0:32:73.15:0,73,1120	0/0:39,0:38:86.63:0,87,1376	0/0:27,0:26:60.17:0,60,898	0/0:24,0:24:57.05:0,57,843	0/0:21,0:21:54.16:0,54,833	0/1:28,0:26:25.12:64,0,25	0/1:17,1:18:78.22:271,0,78	0/1:23,2:22:53.66:740,0,54	1/1:13,0:12:3.01:41,3,0	0/0:60,0:60:4.24:0,4,27	0/0:7,0:7:21.07:0,21,341	0/0:12,0:12:33.09:0,33,486	0/0:48,0:47:90.16:0,90,1426	0/0:17,0:17:33.09:0,33,489	0/1:14,3:17:99:298,0,126	0/1:8,2:10:6.56:83,0,7	1/1:5,0:5:5.89:70,6,0
chr10	108830292	.	CTGTGTG	C	985.99	PASS	AB=0.764;AC=14;AF=0.269;AN=52;BaseQRankSum=2.782;DP=816;FS=9.038;HRun=0;HaplotypeScore=173.5215;InbreedingCoeff=0.1219;MQ=42.96;MQ0=63;MQRankSum=-1.828;QD=2.85;ReadPosRankSum=1.136;VQSLOD=1.5258;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:33:3.69:0,4,61	0/0:11,0:10:14.08:0,14,280	./.	./.	0/0:22,0:20:18.04:0,18,303	0/0:16,0:15:3.01:0,3,48	0/0:25,0:25:20.23:0,20,420	0/0:28,0:21:5.59:0,6,26	0/0:26,0:26:26.87:0,27,585	0/0:28,0:25:36.18:0,36,542	0/0:19,0:21:26.98:0,27,505	0/1:28,14:39:13.68:112,0,14	0/1:24,9:32:14.44:14,0,41	1/1:29,16:42:5.18:96,5,0	0/1:20,14:33:7.39:7,0,13	0/0:32,0:37:48.93:0,49,973	0/1:27,0:26:8.74:9,0,103	0/1:16,0:25:29.01:29,0,106	0/0:26,0:14:7.13:0,7,35	0/0:15,0:13:7.41:0,7,84	0/0:58,0:50:16.40:0,16,116	0/1:18,1:17:7.26:96,0,7	1/1:16,0:17:8.63:134,9,0	1/1:48,1:48:33.06:392,33,0	0/0:18,0:21:9.75:0,10,117	0/1:16,0:28:97.33:109,0,97	0/1:6,0:21:84.11:141,0,84	0/0:6,0:6:3.86:0,4,26
chr10	108833511	.	G	GCACA	10263.05	PASS	AB=0.585;AC=37;AF=0.661;AN=56;BaseQRankSum=0.113;DP=595;FS=8.121;HRun=0;HaplotypeScore=109.4324;InbreedingCoeff=0.2834;MQ=60.54;MQ0=9;MQRankSum=-0.701;QD=21.20;ReadPosRankSum=0.996;VQSLOD=3.6694;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:33:33.51:207,0,34	0/0:5,0:5:3.01:0,3,50	0/0:22,0:6:4.15:0,4,15	0/0:24,0:8:2.82:0,3,16	1/1:7,20:29:0.50:998,0,0	1/1:8,11:19:27.09:666,27,0	1/1:6,21:28:53.71:1208,54,0	1/1:9,0:17:22.51:142,23,0	1/1:3,9:12:23.91:589,24,0	0/0:24,0:24:48.16:0,48,777	0/0:15,0:15:39.12:0,39,624	1/1:9,16:26:42.35:966,42,0	1/1:7,6:14:18.06:438,18,0	1/1:5,15:20:33.11:814,33,0	1/1:3,16:20:32.85:736,33,0	0/0:20,0:20:48.15:0,48,755	0/1:4,0:27:22.97:146,0,23	1/1:7,0:16:6.47:87,6,0	0/1:13,1:29:71.55:242,0,72	0/1:8,0:32:41.49:188,0,41	1/1:16,0:29:30.10:135,30,0	1/1:5,14:19:27.08:664,27,0	1/1:5,9:15:14.79:308,15,0	1/1:3,11:16:30.10:702,30,0	0/1:6,10:20:14.30:653,0,14	0/1:6,0:20:57.84:154,0,58	1/1:7,0:28:2.02:176,2,0	0/1:2,0:9:33.22:45,0,33
chr10	108834067	.	GA	G	5579.44	PASS	AB=0.813;AC=44;AF=0.786;AN=56;BaseQRankSum=2.757;DP=527;FS=1.075;HRun=10;HaplotypeScore=86.6563;InbreedingCoeff=0.6596;MQ=44.59;MQ0=37;MQRankSum=-1.703;QD=13.10;ReadPosRankSum=4.309;VQSLOD=4.9913;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,22:30:36.79:536,37,0	0/1:7,1:7:8.01:8,0,139	0/0:16,1:3:3.09:0,3,35	0/0:15,1:5:10.55:0,11,53	1/1:12,4:16:29.76:226,30,0	1/1:5,14:18:22.32:199,22,0	0/1:9,5:12:8.47:73,0,8	1/1:8,15:20:37.48:378,37,0	1/1:8,1:9:6:51,6,0	0/0:22,1:20:16.46:0,16,338	0/0:28,0:28:44.64:0,45,495	1/1:11,4:12:26.54:209,27,0	1/1:15,3:18:1.57:146,2,0	1/1:14,4:17:32.29:242,32,0	1/1:13,4:16:26.52:193,27,0	0/0:16,0:15:6.80:0,7,230	1/1:12,16:21:44.87:383,45,0	1/1:11,20:24:32.57:490,33,0	1/1:10,13:19:41.28:341,41,0	1/1:3,7:10:20.96:180,21,0	1/1:5,5:7:15:130,15,0	1/1:5,4:9:22.13:155,22,0	1/1:7,2:6:9.74:65,10,0	1/1:18,4:21:37.97:287,38,0	1/1:17,9:24:21.12:327,21,0	1/1:10,14:23:20.82:405,21,0	1/1:8,12:18:7.59:272,8,0	1/1:9,11:15:32.98:284,33,0
chr10	108834077	.	AG	A	2820.79	PASS	AB=0.971;AC=46;AF=0.821;AN=56;BaseQRankSum=5.146;DP=535;FS=14.349;HRun=1;HaplotypeScore=104.7911;InbreedingCoeff=0.4477;MQ=45.20;MQ0=36;MQRankSum=-2.112;QD=5.79;ReadPosRankSum=2.886;VQSLOD=-0.7019;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:32:42.76:155,43,0	0/0:8,0:7:9.90:0,10,71	0/0:20,2:3:7.99:0,8,48	0/0:17,1:6:13.29:0,13,89	1/1:15,0:15:25.67:195,26,0	1/1:17,0:16:20.26:95,20,0	0/1:13,2:13:2.07:100,0,2	1/1:27,0:25:55.14:223,55,0	1/1:9,0:9:7.97:44,8,0	0/1:24,0:21:20.86:21,0,226	0/1:28,0:28:77.27:77,0,284	1/1:14,1:12:20.73:95,21,0	1/1:14,0:14:33.62:181,34,0	1/1:19,1:19:41.93:226,42,0	1/1:12,1:12:25.59:151,26,0	0/1:15,0:14:10.86:11,0,63	1/1:30,0:24:41.75:152,42,0	1/1:32,0:25:17.72:110,18,0	1/1:25,0:22:11.94:76,12,0	1/1:13,0:13:15.26:60,15,0	1/1:10,0:7:13.72:47,14,0	1/1:9,0:9:11.34:107,11,0	1/1:12,0:10:1.53:56,2,0	1/1:16,2:17:35.90:201,36,0	1/1:26,1:26:29.76:242,30,0	1/1:25,0:24:17.15:111,17,0	1/1:20,0:18:26.69:124,27,0	1/1:15,0:12:28.17:117,28,0
chr10	108834078	.	GAA	G	3578.70	PASS	AB=0.807;AC=32;AF=0.571;AN=56;BaseQRankSum=6.960;DP=540;FS=1.412;HRun=17;HaplotypeScore=109.3236;InbreedingCoeff=0.8213;MQ=45.48;MQ0=37;MQRankSum=-3.147;QD=10.62;ReadPosRankSum=3.727;VQSLOD=2.4806;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,27:32:59.51:471,60,0	0/0:5,0:7:20.30:0,20,187	0/0:23,0:3:7.86:0,8,41	0/0:19,0:7:17.92:0,18,161	0/0:15,0:15:31.75:0,32,261	0/0:17,0:16:5.96:0,6,131	0/0:15,0:13:17.81:0,18,272	1/1:7,20:25:51.14:452,51,0	0/0:10,0:10:8.92:0,9,69	0/0:23,0:21:34.59:0,35,358	0/0:27,0:29:65.13:0,65,633	1/1:10,5:12:11.36:78,11,0	0/1:13,0:14:1.91:55,0,2	1/1:18,2:19:13.65:124,14,0	1/1:11,2:12:18.31:102,18,0	0/0:15,0:14:25.70:0,26,205	1/1:12,18:24:50.45:385,50,0	0/1:17,15:25:21.63:301,0,22	1/1:11,7:22:25.23:205,25,0	1/1:2,7:13:14.47:117,14,0	1/1:5,5:7:14.93:118,15,0	1/1:4,5:9:13.65:95,14,0	1/1:10,2:10:13.53:90,14,0	1/1:15,3:17:24.55:153,25,0	0/0:26,0:26:13.52:0,14,359	1/1:9,16:24:21.94:305,22,0	1/1:9,11:18:35.68:271,36,0	1/1:4,11:12:32.91:258,33,0
chr10	108834094	.	AAG	A	42.18	PASS	AB=0.954;AC=10;AF=0.179;AN=56;BaseQRankSum=7.023;DP=509;FS=36.497;HRun=0;HaplotypeScore=116.6267;InbreedingCoeff=-0.1271;MQ=54.50;MQ0=14;MQRankSum=-11.275;QD=0.27;ReadPosRankSum=3.051;VQSLOD=0.1501;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:8.57:0,9,156	0/0:8,0:7:17.68:0,18,173	0/0:30,0:8:19.62:0,20,120	0/0:23,0:10:23.09:0,23,231	0/0:15,0:15:32.26:0,32,383	0/0:17,0:16:18.38:0,18,217	0/0:17,0:17:37.71:0,38,392	0/1:28,0:28:1.99:2,0,158	0/0:12,0:12:12.66:0,13,111	0/0:22,0:21:35:0,35,364	0/0:31,0:31:49.51:0,50,674	0/1:9,0:9:33.07:34,0,33	0/1:12,1:13:5.99:6,0,138	0/1:14,1:15:31.62:32,0,110	0/1:9,1:9:22.44:22,0,34	0/0:14,0:14:18.38:0,18,230	0/1:27,0:25:28.43:28,0,77	0/0:29,0:26:22.87:0,23,260	0/0:15,0:14:12.80:0,13,118	0/0:13,0:13:4.78:0,5,83	0/0:9,0:9:3.46:0,3,62	0/1:10,0:10:0.40:0,0,71	0/1:9,4:13:15.47:15,0,65	0/0:13,0:13:13.17:0,13,79	0/0:27,0:26:51.16:0,51,518	0/1:20,0:20:4.46:4,0,59	0/1:14,0:13:1.73:23,0,2	0/0:21,0:21:3.93:0,4,177
chr10	108834322	.	A	ACACACAC	4288.99	PASS	AB=0.952;AC=17;AF=0.304;AN=56;BaseQRankSum=6.044;DP=589;FS=10.356;HRun=0;HaplotypeScore=214.9264;InbreedingCoeff=-0.3241;MQ=65.33;MQ0=6;MQRankSum=-6.253;QD=11.50;ReadPosRankSum=-2.308;VQSLOD=2.3693;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,5:37:73.51:267,0,74	0/0:5,0:5:15.05:0,15,382	0/0:30,0:16:35.95:0,36,498	0/0:22,0:13:34.54:0,35,459	0/0:15,0:15:28.63:0,29,387	0/0:20,0:21:25.54:0,26,513	0/0:27,0:27:69:0,69,1090	0/1:23,0:23:84.72:85,0,140	0/0:24,0:24:2.44:0,2,338	0/0:27,0:27:78.23:0,78,1827	0/0:9,0:9:24.08:0,24,620	0/1:25,0:25:92.75:370,0,93	0/1:29,0:29:99:503,0,108	0/1:19,0:19:48:75,0,48	0/1:15,0:16:28.25:171,0,28	0/0:15,0:15:42.06:0,42,892	0/1:28,6:34:99:659,0,187	0/1:12,2:15:53.35:530,0,53	0/1:24,0:23:80.57:425,0,81	0/1:15,2:17:44.24:184,0,44	0/1:31,0:30:39.89:40,0,95	1/1:7,0:7:5.62:48,6,0	0/0:9,0:8:3.68:0,4,16	0/1:29,0:28:24.65:88,0,25	0/0:12,0:12:11.30:0,11,301	0/1:30,1:30:99:513,0,200	0/1:22,1:22:99:220,0,102	0/1:10,0:10:74.15:113,0,74
chr10	108836631	.	AATGC	A	18772.08	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=16.840;DP=751;FS=2.719;HRun=0;HaplotypeScore=131.1756;InbreedingCoeff=0.9691;MQ=80.41;MQ0=4;MQRankSum=-6.082;QD=46.12;ReadPosRankSum=2.803;VQSLOD=5.5926;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,49:53:99:2250,126,0	0/0:20,0:20:51.17:0,51,1287	0/0:19,0:19:39.05:0,39,951	0/0:22,0:22:60.21:0,60,1542	1/1:2,12:14:30.10:556,30,0	1/1:3,24:27:63.22:1176,63,0	1/1:0,27:27:72.25:1344,72,0	1/1:1,27:28:81.28:1499,81,0	1/1:6,35:40:99:1848,99,0	0/0:28,0:28:72.24:0,72,1828	0/0:10,0:10:24.08:0,24,631	0/0:33,0:33:99:0,99,2630	0/0:28,0:28:81.28:0,81,2142	0/0:33,0:33:99:0,99,2599	0/0:37,0:37:99:0,105,2801	0/0:37,1:38:55.38:0,55,2825	1/1:2,43:44:99:2072,111,0	1/1:2,15:16:39.13:728,39,0	1/1:2,18:20:54.18:984,54,0	1/1:1,15:15:42.10:748,42,0	1/1:2,31:33:80.91:1478,81,0	0/0:26,0:26:75.26:0,75,1999	0/0:16,0:16:48.14:0,48,1174	0/0:34,0:34:96.33:0,96,2560	1/1:1,24:25:66.23:1215,66,0	1/1:4,26:30:1.84:1365,2,0	1/1:2,24:26:66.23:1232,66,0	1/1:1,4:5:15.05:279,15,0
chr10	108838745	.	A	AGTGTGTGAGTGTGT	6886.40	PASS	AB=0.743;AC=30;AF=0.536;AN=56;BaseQRankSum=-0.357;DP=759;FS=2.383;HRun=0;HaplotypeScore=271.3269;InbreedingCoeff=0.4268;MQ=57.11;MQ0=13;MQRankSum=-7.900;QD=12.94;ReadPosRankSum=-5.163;VQSLOD=2.4939;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:37:12.46:66,0,12	0/0:11,0:11:24:0,24,396	0/0:27,0:17:20.26:0,20,222	0/0:33,0:21:38.18:0,38,409	1/1:10,0:28:5.27:168,5,0	1/1:26,0:25:20.92:230,21,0	1/1:33,0:33:54.76:834,55,0	1/1:32,0:32:75.10:1148,75,0	1/1:25,0:25:27.40:517,27,0	0/0:29,0:30:36.74:0,37,1174	0/0:11,0:16:26.83:0,27,668	0/0:23,0:38:35.19:0,35,582	0/0:10,0:27:8.69:0,9,313	0/1:12,0:25:3.17:3,0,205	0/0:15,0:22:36.63:0,37,397	0/0:21,0:23:51.03:0,51,1270	0/1:30,0:30:20.69:528,0,21	1/1:5,9:16:1.20:320,1,0	1/1:17,0:18:49.71:592,50,0	1/1:6,16:25:9.90:433,10,0	0/1:19,31:61:0.02:1,0,0	0/1:9,0:28:22.70:23,0,220	0/1:21,0:31:84.60:85,0,241	0/1:18,0:26:91.04:168,0,91	1/1:20,0:20:18.43:285,18,0	0/1:32,0:31:99:958,0,103	1/1:6,0:23:14.95:263,15,0	1/1:3,4:8:8.99:266,9,0
chr10	108838751	.	T	TGA	2096.99	PASS	AB=0.974;AC=22;AF=0.393;AN=56;BaseQRankSum=4.091;DP=733;FS=0.000;HRun=0;HaplotypeScore=148.3988;InbreedingCoeff=-0.1535;MQ=54.42;MQ0=16;MQRankSum=-1.665;QD=4.44;ReadPosRankSum=4.720;VQSLOD=2.4917;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:15.82:0,16,122	0/0:10,0:10:27:0,27,283	0/0:21,0:11:23.20:0,23,256	0/0:40,0:24:47.18:0,47,502	0/0:26,0:25:4.05:0,4,46	1/1:21,0:20:15.23:115,15,0	1/1:34,0:34:0.32:389,0,0	0/1:33,0:33:99:481,0,132	0/1:25,0:25:13.22:164,0,13	0/0:31,0:31:78:0,78,773	0/0:17,0:17:29.97:0,30,330	0/1:37,0:37:13.84:14,0,289	0/0:27,0:27:20.94:0,21,234	0/1:25,0:24:32.69:33,0,117	0/0:23,0:23:10.74:0,11,267	0/0:25,0:25:59.98:0,60,702	0/1:12,15:29:57.66:58,0,84	0/1:14,0:13:20.37:20,0,36	1/1:19,0:19:0.31:347,0,0	0/1:21,0:21:34.92:66,0,35	0/1:51,0:49:15.07:15,0,44	0/1:28,0:28:34.86:35,0,56	0/1:31,0:30:15.62:16,0,178	0/1:27,0:26:17.14:17,0,112	0/1:18,0:18:6.48:136,0,6	0/1:31,0:29:99:252,0,147	0/1:22,0:22:7.78:70,0,8	1/1:6,0:5:3.01:32,3,0
chr10	108839207	.	G	GA	7815.74	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-16.322;DP=634;FS=0.311;HRun=6;HaplotypeScore=57.5631;InbreedingCoeff=0.9969;MQ=80.08;MQ0=0;MQRankSum=-2.076;QD=31.90;ReadPosRankSum=1.087;VQSLOD=5.2108;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:30:78.25:978,78,0	0/0:16,0:16:42.10:0,42,428	0/0:21,0:21:47.78:0,48,442	0/0:15,0:15:44.87:0,45,415	0/0:40,0:40:99:0,110,1088	0/0:25,0:25:75.17:0,75,765	0/0:17,0:17:42.05:0,42,409	1/1:2,19:21:57.15:689,57,0	0/0:15,0:15:42.09:0,42,428	0/0:19,0:19:42.08:0,42,422	0/0:25,0:25:66.13:0,66,661	0/0:19,0:19:54.11:0,54,544	0/0:19,0:19:54.12:0,54,551	0/0:25,0:25:69.15:0,69,704	0/0:26,0:26:63.14:0,63,643	0/0:25,0:25:69.15:0,69,704	1/1:2,34:36:93.30:1170,93,0	1/1:2,19:21:54.17:679,54,0	1/1:6,15:21:20.53:546,21,0	1/1:3,36:39:99:1270,105,0	1/1:1,14:15:36.12:453,36,0	0/0:21,0:21:63.14:0,63,642	0/0:20,0:20:54.03:0,54,520	0/0:19,0:19:54.12:0,54,551	0/0:22,0:22:63.13:0,63,637	1/1:2,28:30:56.64:1011,57,0	1/1:2,25:27:65.68:830,66,0	1/1:0,5:5:15.05:189,15,0
chr10	108840646	.	C	CTT	15080.25	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-8.881;DP=576;FS=0.000;HRun=0;HaplotypeScore=92.7801;InbreedingCoeff=0.9820;MQ=73.70;MQ0=0;MQRankSum=-6.338;QD=51.12;ReadPosRankSum=0.713;VQSLOD=5.5948;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:20:52.39:999,52,0	0/0:9,0:9:21.07:0,21,342	0/0:31,0:22:32.09:0,32,808	0/0:21,0:14:33.74:0,34,400	1/1:2,19:21:54.14:1050,54,0	1/1:0,13:13:33.11:669,33,0	1/1:0,12:12:33.11:667,33,0	1/1:4,26:31:90.25:1670,90,0	1/1:0,13:13:36.12:730,36,0	0/0:20,0:20:54.18:0,54,876	0/0:20,0:20:60.20:0,60,973	0/0:20,0:20:48.16:0,48,776	0/0:19,0:19:36.12:0,36,571	0/0:25,0:25:57.18:0,57,900	0/0:20,0:20:51.16:0,51,800	0/0:13,0:13:36.11:0,36,561	1/1:0,14:14:30.10:609,30,0	1/1:1,20:21:54.19:1097,54,0	1/1:5,26:32:90.30:1733,90,0	1/1:1,18:19:51.17:1035,51,0	1/1:2,10:13:21.54:427,22,0	0/0:31,0:31:84.27:0,84,1329	0/0:30,0:30:75.21:0,75,1187	0/0:22,0:22:57.19:0,57,920	1/1:1,27:27:78.27:1575,78,0	1/1:2,18:20:5.22:959,5,0	1/1:4,21:26:66.14:1251,66,0	1/1:0,11:11:30.10:609,30,0
chr10	108840649	.	AT	A	1499.31	PASS	AB=0.767;AC=14;AF=0.250;AN=56;BaseQRankSum=-7.561;DP=587;FS=11.707;HRun=14;HaplotypeScore=130.8241;InbreedingCoeff=0.4826;MQ=74.20;MQ0=0;MQRankSum=6.046;QD=6.78;ReadPosRankSum=5.137;VQSLOD=1.1134;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:47.72:0,48,392	0/0:9,0:9:23.80:0,24,199	0/1:34,1:25:21.48:21,0,130	0/0:20,0:13:5.45:0,5,66	0/0:16,0:27:48.96:0,49,267	0/0:10,0:17:46.16:0,46,252	0/0:8,0:15:43.32:0,43,241	0/0:30,0:30:50.99:0,51,448	0/0:9,0:13:28.99:0,29,167	0/0:19,1:20:15.27:0,15,261	0/0:18,1:22:23.98:0,24,329	0/1:8,11:19:31.39:148,0,31	1/1:4,16:20:29.59:200,30,0	1/1:5,17:23:31.68:211,32,0	0/1:3,12:17:14.88:160,0,15	0/0:13,0:13:29.98:0,30,260	0/1:15,1:16:10.69:11,0,153	0/0:20,1:21:27.52:0,28,365	0/0:26,2:29:12.82:0,13,363	0/0:21,0:21:42.89:0,43,377	0/1:9,1:11:1.94:2,0,113	0/1:9,21:30:3.07:322,0,3	1/1:6,23:29:50.40:349,50,0	1/1:6,15:21:25.04:251,25,0	0/0:15,0:29:66.53:0,67,371	0/0:20,1:21:25.92:0,26,350	0/0:24,1:27:32.89:0,33,365	0/0:10,0:11:29.80:0,30,243
chr10	108841098	.	TGTGGGG	T	340.88	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=-1.535;DP=378;FS=3.808;HRun=0;HaplotypeScore=83.9512;InbreedingCoeff=0.7031;MQ=78.93;MQ0=5;MQRankSum=0.934;QD=7.25;ReadPosRankSum=0.597;VQSLOD=1.6403;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.80:0,58,468	0/0:4,0:4:3.47:0,3,25	0/0:38,0:21:49.80:0,50,749	0/0:25,0:15:21.56:0,22,220	1/1:12,0:12:8.84:74,9,0	1/1:11,0:11:17.94:169,18,0	1/1:13,0:13:0.73:161,1,0	0/0:20,0:20:59.84:0,60,529	1/1:6,5:11:3.01:68,3,0	0/0:14,0:14:14.93:0,15,125	0/0:5,0:5:8.95:0,9,68	0/0:10,0:10:11.94:0,12,102	0/0:9,0:9:6.01:0,6,59	0/0:7,0:7:14.99:0,15,133	0/0:9,0:9:11.99:0,12,112	0/0:10,0:10:16.44:0,16,200	0/0:20,0:20:25.83:0,26,294	0/0:13,0:13:32.28:0,32,271	0/0:18,0:18:47.95:0,48,443	0/0:6,0:6:15.38:0,15,116	0/0:27,0:27:66.75:0,67,556	0/0:10,0:10:17.87:0,18,135	0/0:7,0:7:14.99:0,15,144	0/0:3,0:3:6.01:0,6,74	./.	0/0:19,0:19:38.44:0,38,332	0/0:22,0:22:64.04:0,64,519	0/0:6,0:6:14.36:0,14,116
chr10	108841468	.	C	CAA	7994.86	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-10.171;DP=679;FS=10.467;HRun=10;HaplotypeScore=86.6275;InbreedingCoeff=0.9964;MQ=71.30;MQ0=1;MQRankSum=-3.029;QD=30.28;ReadPosRankSum=-2.169;VQSLOD=3.6820;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,29:34:81.27:1181,81,0	0/0:8,0:8:21.02:0,21,213	0/0:23,0:18:24.06:0,24,266	0/0:20,0:17:35.75:0,36,340	0/0:23,0:24:65.88:0,66,653	0/0:27,0:27:66.24:0,66,676	0/0:27,0:27:59.90:0,60,662	1/1:6,17:29:67.61:819,68,0	0/0:21,0:22:59.86:0,60,592	0/0:35,0:35:84.11:0,84,843	0/0:20,0:20:42.06:0,42,420	0/0:26,0:27:68.24:0,68,660	0/0:18,0:18:48.09:0,48,488	0/0:22,0:23:41.77:0,42,479	0/0:23,0:24:59.81:0,60,591	0/0:31,0:31:72.09:0,72,732	1/1:3,20:24:60.93:846,61,0	1/1:6,18:25:48.16:716,48,0	1/1:11,15:29:59.12:772,59,0	1/1:3,19:22:56.51:765,57,0	1/1:5,21:32:62.66:821,63,0	0/0:26,0:29:71.02:0,71,676	0/0:19,0:20:32.71:0,33,377	0/0:13,0:15:41.57:0,42,390	0/0:21,0:21:45.03:0,45,445	1/1:6,24:33:24.73:993,25,0	1/1:8,22:30:59.56:858,60,0	1/1:0,6:6:15.05:223,15,0
chr10	108842373	.	CGTGTGTGTGTGTGCGTGTGT	C	6505.49	PASS	AB=0.995;AC=15;AF=0.268;AN=56;BaseQRankSum=3.565;DP=787;FS=0.000;HRun=0;HaplotypeScore=362.2119;InbreedingCoeff=0.5553;MQ=65.48;MQ0=10;MQRankSum=-8.529;QD=21.33;ReadPosRankSum=2.945;VQSLOD=2.2190;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:43.34:0,43,5356	0/0:11,0:10:27.09:0,27,2052	0/1:36,0:21:6.81:7,0,343	0/1:42,0:18:13.73:14,0,190	1/1:5,18:25:30.02:1192,30,0	1/1:3,21:25:18.06:873,18,0	1/1:10,17:28:21:782,21,0	0/0:32,0:31:61.35:0,61,2072	1/1:2,31:33:36.12:1884,36,0	0/0:22,0:22:57.08:0,57,2870	0/0:15,0:15:32.92:0,33,1757	0/0:25,0:25:14.17:0,14,2445	0/1:24,0:24:12.80:13,0,1727	0/0:28,0:28:15.95:0,16,2207	0/1:30,0:30:54.56:55,0,2999	0/0:22,0:22:54.11:0,54,3219	0/0:38,0:39:78.07:0,78,3951	0/0:29,0:29:55.36:0,55,2741	0/0:20,0:20:30.10:0,30,2428	0/0:24,0:25:66.21:0,66,3760	0/0:61,0:61:99:0,114,4579	0/0:25,0:25:37.95:0,38,2270	0/0:19,0:20:7.13:0,7,1724	0/1:35,0:35:5.79:6,0,2382	1/1:2,23:25:33.11:1681,33,0	0/0:24,0:25:66.16:0,66,3498	0/0:27,0:27:50.83:0,51,3370	0/0:5,0:5:12.04:0,12,808
chr10	108842387	.	CGT	C	4869.07	PASS	AB=0.900;AC=32;AF=0.571;AN=56;BaseQRankSum=-1.879;DP=779;FS=0.425;HRun=0;HaplotypeScore=146.0585;InbreedingCoeff=0.5327;MQ=53.63;MQ0=17;MQRankSum=-2.038;QD=9.72;ReadPosRankSum=1.305;VQSLOD=4.4552;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,35:55:55.04:710,55,0	0/1:10,2:11:10.93:11,0,301	0/0:37,0:10:6.38:0,6,63	0/0:53,1:12:9.86:0,10,93	0/1:24,0:24:12.46:39,0,12	1/1:24,0:24:14.16:69,14,0	1/1:21,0:20:10.91:47,11,0	1/1:16,8:23:23.92:237,24,0	1/1:31,0:31:30.60:143,31,0	0/1:23,2:25:7.78:8,0,424	0/1:13,0:14:48.31:48,0,206	0/0:25,0:25:35.89:0,36,287	0/0:22,0:22:23.94:0,24,197	0/0:26,0:26:22.62:0,23,274	0/0:29,0:29:20.84:0,21,316	0/1:23,1:25:32.36:32,0,566	1/1:10,26:36:51.15:594,51,0	1/1:10,16:27:32.93:364,33,0	1/1:10,11:21:35.42:386,35,0	1/1:5,17:25:49.45:500,49,0	0/1:29,23:53:21.97:432,0,22	0/0:29,0:29:6.34:0,6,254	0/0:23,0:23:21.76:0,22,199	0/0:33,0:33:38.92:0,39,339	1/1:24,0:24:27.91:137,28,0	1/1:9,17:27:53.02:568,53,0	1/1:3,19:23:41.79:447,42,0	1/1:0,5:7:11.70:98,12,0
chr10	108842391	.	T	TGC	3112.20	PASS	AB=0.576;AC=11;AF=0.196;AN=56;BaseQRankSum=-2.831;DP=785;FS=2.170;HRun=0;HaplotypeScore=158.3935;InbreedingCoeff=0.6289;MQ=53.80;MQ0=20;MQRankSum=5.157;QD=16.64;ReadPosRankSum=3.748;VQSLOD=3.8147;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:57:70.32:0,70,709	0/0:13,0:12:33.01:0,33,410	0/0:43,0:12:21.05:0,21,232	0/0:58,0:12:29.95:0,30,339	0/0:23,0:24:28.96:0,29,166	0/0:24,0:24:17.27:0,17,95	0/0:20,0:20:14.73:0,15,73	0/0:25,0:24:68.78:0,69,566	0/0:31,0:31:34.25:0,34,178	0/0:25,0:25:17.84:0,18,664	0/0:14,0:14:30.01:0,30,347	1/1:1,23:24:31.38:627,31,0	1/1:5,17:22:3.75:375,4,0	0/1:11,17:29:40.09:402,0,40	1/1:17,8:26:24.19:740,24,0	0/0:24,0:24:64.91:0,65,781	0/0:36,0:36:68.64:0,69,510	0/0:27,0:27:55.44:0,55,395	0/0:20,0:19:53.32:0,53,371	0/0:25,0:25:62.44:0,62,447	0/0:47,0:47:88.18:0,88,711	0/1:8,21:29:42.54:274,0,43	1/1:6,17:24:20.60:381,21,0	0/1:4,27:33:7.47:479,0,7	0/0:24,0:24:31.27:0,31,157	0/0:26,0:26:74.62:0,75,577	0/0:24,0:23:50.47:0,50,359	0/0:9,0:9:14.78:0,15,97
chr10	108842867	.	TCATTCCAAGTCTTGGAGGA	T	14696.26	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.358;DP=746;FS=3.563;HRun=0;HaplotypeScore=346.0819;InbreedingCoeff=0.9892;MQ=81.96;MQ0=0;MQRankSum=-14.633;QD=77.76;ReadPosRankSum=5.974;VQSLOD=3.5611;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.24:0,72,5806	0/0:18,0:18:51.18:0,51,4374	0/0:25,0:25:69.24:0,69,3924	0/0:21,0:21:51.27:0,51,2935	0/0:20,0:20:57.20:0,57,4514	0/0:30,0:30:90.31:0,90,7316	0/0:21,0:21:63.16:0,63,3688	0/0:40,0:40:99:0,114,7414	0/0:31,0:31:93.28:0,93,7200	0/0:43,0:43:99:0,126,10045	0/0:25,0:25:66.21:0,66,4932	1/1:1,35:36:48.16:2604,48,0	1/1:0,26:26:57.20:3077,57,0	1/1:3,17:20:27.09:1448,27,0	1/1:0,35:35:54.13:2747,54,0	0/0:33,0:33:99:0,99,7828	0/0:15,0:15:42.11:0,42,3025	0/0:28,0:28:84.22:0,84,6704	0/0:36,0:36:99:0,108,6431	0/0:37,0:36:99:0,108,8250	0/0:21,0:21:63.21:0,63,5114	1/1:0,25:26:42.02:1916,42,0	1/1:1,30:31:51.18:2417,51,0	1/1:2,13:15:9.03:488,9,0	0/0:19,0:19:54.18:0,54,4081	0/0:25,0:25:72.23:0,72,5911	0/0:29,0:27:87.30:0,87,6838	0/0:16,0:16:48.16:0,48,4269
chr10	108843608	.	GC	G	2569.87	PASS	AB=0.909;AC=21;AF=0.375;AN=56;BaseQRankSum=4.159;DP=354;FS=26.118;HRun=15;HaplotypeScore=58.9721;InbreedingCoeff=0.6260;MQ=73.95;MQ0=0;MQRankSum=0.682;QD=11.58;ReadPosRankSum=5.728;VQSLOD=1.2497;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,24:35:64.96:422,65,0	0/0:4,0:4:0:0,0,0	0/0:18,0:12:11.67:0,12,87	0/1:8,0:10:12.66:13,0,31	0/0:3,0:3:2.99:0,3,23	0/0:9,0:10:8.45:0,8,52	0/0:20,0:20:12.70:0,13,74	1/1:10,8:20:24.27:145,24,0	0/0:11,0:11:8.57:0,9,45	0/0:6,0:6:0:0,0,0	0/0:2,0:2:0:0,0,0	0/0:3,0:3:2.96:0,3,19	0/0:7,0:7:11.79:0,12,77	0/0:6,0:6:2.84:0,3,15	0/0:7,0:7:6.83:0,7,35	0/0:10,0:10:2.96:0,3,19	1/1:7,18:25:53.05:345,53,0	1/1:4,11:15:29.38:192,29,0	1/1:4,10:14:29.40:191,29,0	1/1:3,14:17:35.40:230,35,0	1/1:4,24:28:70.84:459,71,0	0/0:6,0:6:0.47:0,0,1	0/0:5,0:5:0.47:0,0,1	0/0:8,0:8:0.47:0,0,1	0/0:6,0:6:2.96:0,3,19	1/1:4,9:13:26.56:170,27,0	1/1:7,28:35:73.71:479,74,0	1/1:5,5:10:14.70:96,15,0
chr10	108844041	.	GT	G	2776.15	PASS	AB=0.853;AC=20;AF=0.357;AN=56;BaseQRankSum=12.096;DP=719;FS=3.898;HRun=12;HaplotypeScore=78.0862;InbreedingCoeff=0.4428;MQ=71.98;MQ0=3;MQRankSum=-0.846;QD=8.29;ReadPosRankSum=3.511;VQSLOD=2.8740;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,3:58:59.57:0,60,1211	0/0:11,1:12:9.79:0,10,269	0/1:31,1:22:16.80:17,0,159	0/1:20,2:16:23.94:24,0,101	0/0:28,1:29:44.91:0,45,606	0/0:27,2:29:39.85:0,40,569	0/0:21,0:22:44.13:0,44,557	0/0:24,2:27:9.80:0,10,492	0/1:19,2:21:1.40:1,0,344	0/0:28,1:31:45.53:0,46,583	0/1:15,2:18:1.54:2,0,335	1/1:6,14:21:46.82:350,47,0	1/1:3,25:29:73.74:563,74,0	1/1:1,19:21:52.84:400,53,0	1/1:2,22:24:53.74:418,54,0	0/0:25,1:26:33.77:0,34,523	0/1:24,6:31:35.03:35,0,582	0/0:22,2:26:1.08:0,1,481	0/1:9,1:10:2.20:2,0,162	0/0:30,0:32:48.74:0,49,633	0/1:19,3:22:21.15:21,0,348	1/1:7,19:28:33.36:422,33,0	1/1:8,18:29:52.96:370,53,0	0/1:5,19:24:4.12:338,0,4	0/0:22,1:24:36.70:0,37,526	0/0:26,1:27:39.88:0,40,576	0/0:29,1:30:54.89:0,55,710	0/0:10,0:10:30.05:0,30,299
chr10	108847341	.	CG	C	5860.16	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-0.082;DP=626;FS=19.882;HRun=6;HaplotypeScore=82.9387;InbreedingCoeff=0.9994;MQ=80.47;MQ0=0;MQRankSum=-3.989;QD=25.59;ReadPosRankSum=1.947;VQSLOD=3.3124;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,37:39:96.24:1031,96,0	0/0:14,0:14:36.12:0,36,474	0/0:35,0:32:81.13:0,81,877	0/0:24,0:21:41.09:0,41,502	0/0:27,0:27:69.14:0,69,853	0/0:27,0:27:72.23:0,72,943	0/0:20,0:20:54.11:0,54,638	1/1:7,19:26:39.07:506,39,0	0/0:16,0:16:45.12:0,45,570	0/0:36,0:36:87.25:0,87,1095	0/0:16,0:16:45.15:0,45,585	0/0:2,0:19:43.34:0,43,241	0/0:1,0:20:51.42:0,51,261	0/0:5,0:21:56.39:0,56,277	0/0:2,0:17:34.63:0,35,188	0/0:21,0:21:57.17:0,57,735	1/1:2,19:21:51.13:548,51,0	1/1:1,26:27:78.20:838,78,0	1/1:1,13:14:39.08:406,39,0	1/1:4,18:22:51.12:546,51,0	1/1:3,29:32:60.15:645,60,0	0/0:2,0:20:43.14:0,43,224	0/0:2,0:15:25.99:0,26,143	0/0:2,0:17:37.38:0,37,192	0/0:32,0:32:90.24:0,90,1135	1/1:2,23:25:69.16:733,69,0	1/1:0,12:12:28.55:320,29,0	1/1:1,10:11:27.07:287,27,0
chr10	108847960	.	TATTGGGAAAATGAGAAAA	T	18439.60	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=16.834;DP=801;FS=1.606;HRun=0;HaplotypeScore=366.4805;InbreedingCoeff=0.9995;MQ=77.90;MQ0=1;MQRankSum=-16.943;QD=97.56;ReadPosRankSum=2.934;VQSLOD=3.3650;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,11244	0/0:22,0:22:66.23:0,66,5075	0/0:26,0:25:60.24:0,60,3006	0/0:15,0:15:44.82:0,45,1870	0/0:32,0:32:96.33:0,96,7688	0/0:21,0:21:63.20:0,63,4641	0/0:28,0:28:81.22:0,81,5209	0/0:31,0:31:87.30:0,87,6416	0/0:40,0:40:99:0,117,8825	0/0:34,0:34:99:0,99,7526	0/0:21,0:21:63.22:0,63,4575	1/1:0,32:32:69.24:3572,69,0	1/1:0,19:19:30.10:1535,30,0	1/1:1,33:34:66.23:3423,66,0	1/1:1,46:47:93.32:4787,93,0	0/0:40,0:40:99:0,117,8951	0/0:22,0:22:66.23:0,66,5051	0/0:24,0:24:72.25:0,72,6006	0/0:21,0:21:63.22:0,63,4399	0/0:38,0:38:99:0,108,8527	0/0:46,0:45:99:0,132,9990	1/1:2,19:21:42.14:2129,42,0	1/1:0,20:20:39.13:1746,39,0	1/1:0,16:16:24.08:1247,24,0	0/0:20,0:20:57.20:0,57,4479	0/0:36,0:36:99:0,105,8266	0/0:36,0:36:99:0,108,8271	0/0:11,0:11:33.11:0,33,2741
chr10	108848728	.	TG	T	2278.84	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.258;DP=359;FS=0.000;HRun=2;HaplotypeScore=36.1440;InbreedingCoeff=0.9782;MQ=90.55;MQ0=0;MQRankSum=-3.986;QD=34.53;ReadPosRankSum=2.284;VQSLOD=3.2405;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.01:0,54,753	0/0:5,0:5:15.05:0,15,225	0/0:15,0:15:22.88:0,23,529	0/0:15,0:15:19.79:0,20,445	1/1:0,11:11:30.10:389,30,0	1/1:0,9:9:27.09:351,27,0	1/1:0,10:10:27.09:351,27,0	0/0:27,0:27:78.26:0,78,1150	1/1:0,10:10:30.10:389,30,0	0/0:17,0:17:51.16:0,51,746	0/0:6,0:6:18.05:0,18,249	0/0:14,0:14:42.14:0,42,628	0/0:14,0:14:42.14:0,42,628	0/0:5,0:5:15.05:0,15,223	0/0:9,0:9:27.09:0,27,404	0/0:6,0:6:18.06:0,18,270	0/0:25,0:25:72.20:0,72,1054	0/0:23,0:23:66.22:0,66,986	0/0:14,0:14:42.14:0,42,612	0/0:12,0:12:36.12:0,36,539	0/0:11,0:11:33.11:0,33,494	0/0:9,0:9:27.09:0,27,405	0/0:8,0:8:24.08:0,24,359	0/0:4,0:4:12.04:0,12,180	1/1:0,26:26:75.24:974,75,0	0/0:14,0:14:42.14:0,42,628	0/0:11,0:11:33.10:0,33,474	0/0:11,0:11:33.11:0,33,494
chr10	108852966	.	AGAG	A	9521.98	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=16.172;DP=714;FS=1.018;HRun=0;HaplotypeScore=103.8759;InbreedingCoeff=0.9942;MQ=82.36;MQ0=0;MQRankSum=-5.476;QD=47.37;ReadPosRankSum=5.556;VQSLOD=6.7547;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.28:0,93,2177	0/0:15,0:15:45.15:0,45,1108	0/0:26,0:26:78.18:0,78,1766	0/0:24,0:24:71.96:0,72,1452	0/0:27,0:27:81.25:0,81,1863	0/0:33,0:33:99:0,99,2321	0/0:21,0:21:63.22:0,63,1546	0/0:42,0:41:99:0,126,2655	0/0:25,0:25:72.23:0,72,1725	0/0:15,0:15:45.15:0,45,1061	0/0:23,0:23:63.20:0,63,1496	1/1:0,43:43:99:1949,105,0	1/1:0,26:26:72.25:1333,72,0	1/1:0,22:22:57.20:1055,57,0	1/1:0,39:39:99:1896,102,0	0/0:31,0:31:93.29:0,93,2179	0/0:32,0:32:96.31:0,96,2299	0/0:17,0:17:51.12:0,51,1144	0/0:9,0:9:27.08:0,27,619	0/0:23,0:23:69.24:0,69,1698	0/0:32,0:32:96.33:0,96,2339	1/1:0,28:28:75.26:1392,75,0	1/1:0,15:15:33.11:613,33,0	1/1:0,28:28:69:1283,69,0	0/0:18,0:18:54.16:0,54,1225	0/0:37,0:37:99:0,111,2581	0/0:27,0:27:81.23:0,81,1847	0/0:4,0:4:12.04:0,12,295
chr10	108854223	.	G	GA	7230.76	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-13.739;DP=704;FS=9.022;HRun=1;HaplotypeScore=65.5315;InbreedingCoeff=0.9894;MQ=91.35;MQ0=0;MQRankSum=-1.853;QD=41.56;ReadPosRankSum=3.089;VQSLOD=5.1884;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1478	0/0:11,0:11:33.11:0,33,427	0/0:32,0:32:89.56:0,90,1132	0/0:31,0:30:39.61:0,40,945	0/0:32,0:32:87.27:0,87,1114	0/0:33,0:33:93.25:0,93,1154	0/0:25,0:25:69.21:0,69,882	0/0:32,0:32:93.29:0,93,1195	0/0:22,0:22:63.17:0,63,775	0/0:22,0:22:63.20:0,63,806	0/0:26,0:26:78.25:0,78,1013	1/1:0,22:22:63.21:942,63,0	1/1:0,30:30:87.29:1303,87,0	1/1:1,23:24:63.17:919,63,0	1/1:0,25:25:75.25:1124,75,0	0/0:21,0:21:60.18:0,60,765	0/0:20,0:20:60.20:0,60,779	0/0:27,0:27:81.26:0,81,1049	0/0:23,0:23:66.17:0,66,801	0/0:33,0:33:96.31:0,96,1246	0/0:22,0:22:66.21:0,66,855	1/1:1,23:24:60.16:874,60,0	1/1:0,21:21:60.20:899,60,0	1/1:0,28:28:78.26:1169,78,0	0/0:28,0:28:81.26:0,81,1051	0/0:21,0:21:63.20:0,63,818	0/0:26,0:26:75.24:0,75,973	0/0:3,0:3:9.03:0,9,117
chr10	108854434	.	TC	T	4500.70	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.754;DP=651;FS=0.721;HRun=6;HaplotypeScore=64.7159;InbreedingCoeff=0.9980;MQ=91.26;MQ0=0;MQRankSum=-2.132;QD=27.95;ReadPosRankSum=1.175;VQSLOD=5.4371;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.23:0,72,947	0/0:8,0:8:24.08:0,24,316	0/0:32,0:32:90.24:0,90,1117	0/0:26,0:27:29.31:0,29,720	0/0:27,0:27:75.22:0,75,958	0/0:27,0:27:81.22:0,81,1045	0/0:17,0:17:48.16:0,48,631	0/0:37,0:37:93.27:0,93,1174	0/0:25,0:25:63.18:0,63,800	0/0:26,0:26:75.23:0,75,952	0/0:27,0:27:69.22:0,69,894	1/1:1,31:32:90.23:967,90,0	1/1:0,20:20:51.13:548,51,0	1/1:2,18:20:51.12:548,51,0	1/1:2,12:14:33.08:355,33,0	0/0:24,0:24:69.21:0,69,894	0/0:26,0:26:72.23:0,72,947	0/0:15,0:15:42.12:0,42,537	0/0:18,0:18:51.16:0,51,657	0/0:18,0:18:54.16:0,54,696	0/0:31,0:30:87.24:0,87,1113	1/1:0,30:30:75.15:793,75,0	1/1:3,20:23:63.16:676,63,0	1/1:1,21:22:57.14:613,57,0	0/0:23,0:23:66.21:0,66,868	0/0:22,0:22:57.18:0,57,738	0/0:26,0:26:72.21:0,72,930	0/0:8,0:8:18.06:0,18,237
chr10	108854751	.	CTAAG	C	11523.79	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=18.551;DP=777;FS=1.343;HRun=0;HaplotypeScore=159.9456;InbreedingCoeff=0.9998;MQ=79.34;MQ0=0;MQRankSum=-4.044;QD=54.36;ReadPosRankSum=4.263;VQSLOD=5.7895;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,3934	0/0:9,0:9:27.09:0,27,777	0/0:21,0:21:62.24:0,62,1599	0/0:17,0:17:50.76:0,51,1204	0/0:36,0:35:99:0,108,3120	0/0:26,0:26:78.27:0,78,2157	0/0:31,0:31:93.30:0,93,2557	0/0:24,0:24:72.24:0,72,1949	0/0:26,0:26:78.27:0,78,2246	0/0:31,0:31:93.31:0,93,2615	0/0:23,0:23:69.24:0,69,1965	1/1:0,34:34:90.27:1834,90,0	1/1:0,29:29:78.27:1620,78,0	1/1:0,33:33:90.31:1878,90,0	1/1:0,27:27:69.24:1446,69,0	0/0:29,0:29:87.30:0,87,2510	0/0:36,0:36:99:0,108,3071	0/0:16,0:16:48.16:0,48,1391	0/0:29,0:29:87.27:0,87,2405	0/0:15,0:15:45.15:0,45,1267	0/0:43,0:43:99:0,129,3645	1/1:0,32:32:93.32:1887,93,0	1/1:1,24:25:59.93:1236,60,0	1/1:0,32:32:77.73:1623,78,0	0/0:30,0:30:90.30:0,90,2480	0/0:36,0:36:99:0,108,3034	0/0:28,0:28:84.25:0,84,2313	0/0:11,0:11:33.11:0,33,956
chr10	108856836	.	TC	T	8130	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.296;DP=786;FS=0.602;HRun=2;HaplotypeScore=74.4028;InbreedingCoeff=0.9992;MQ=82.12;MQ0=0;MQRankSum=-3.009;QD=35.50;ReadPosRankSum=5.130;VQSLOD=5.1300;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,178,2548	0/0:14,0:14:42.14:0,42,628	0/0:24,0:24:69.11:0,69,939	0/0:22,0:22:60.07:0,60,847	0/0:20,0:20:60.18:0,60,866	0/0:23,0:23:66.22:0,66,989	0/0:33,0:33:96.31:0,96,1409	0/0:22,0:22:63.17:0,63,918	0/0:28,0:28:78.26:0,78,1169	0/0:13,0:13:39.13:0,39,583	0/0:19,0:19:54.18:0,54,809	1/1:1,40:41:99:1481,114,0	1/1:1,35:36:90.28:1157,90,0	1/1:0,43:43:99:1636,126,0	1/1:3,24:27:63.20:818,63,0	0/0:33,0:33:96.30:0,96,1399	0/0:39,0:39:99:0,117,1711	0/0:27,0:27:78.26:0,78,1169	0/0:19,0:19:57.17:0,57,813	0/0:22,0:22:66.17:0,66,911	0/0:58,0:58:99:0,166,2429	1/1:0,28:28:81.26:1052,81,0	1/1:1,21:22:60.19:779,60,0	1/1:0,32:32:93.30:1208,93,0	0/0:22,0:22:63.19:0,63,885	0/0:24,0:24:72.21:0,72,1005	0/0:25,0:25:72.24:0,72,1070	0/0:7,0:7:21.07:0,21,315
chr10	108859377	.	GC	G	1923.63	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=8.313;DP=426;FS=4.341;HRun=3;HaplotypeScore=52.0937;InbreedingCoeff=0.9474;MQ=54.39;MQ0=14;MQRankSum=-2.145;QD=29.59;ReadPosRankSum=-1.153;VQSLOD=2.5219;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:40:99:0,114,1596	0/0:7,0:7:21.07:0,21,302	0/0:11,0:2:1.55:0,2,4	./.	1/1:0,18:18:48.15:594,48,0	1/1:0,12:11:33.10:406,33,0	1/1:1,15:16:36.11:443,36,0	0/0:15,0:13:39.06:0,39,492	1/1:2,8:10:27.08:332,27,0	0/0:21,0:21:63.21:0,63,894	0/0:6,0:6:15.05:0,15,214	0/0:10,0:10:27.09:0,27,388	0/0:12,0:12:33.11:0,33,472	0/0:14,0:14:39.13:0,39,562	0/0:17,0:17:51.17:0,51,734	0/0:16,0:16:45.15:0,45,648	0/0:36,0:36:99:0,99,1405	0/0:21,0:21:60.20:0,60,862	0/0:15,0:15:45.13:0,45,628	0/0:16,0:16:41.93:0,42,600	0/0:23,0:22:60.19:0,60,845	0/0:9,0:9:20.86:0,21,300	0/0:11,0:11:27.09:0,27,385	0/0:16,0:15:42.14:0,42,603	1/1:0,9:9:27.06:320,27,0	0/0:17,0:17:51.17:0,51,732	0/0:10,0:10:30.10:0,30,431	0/0:5,0:4:12.01:0,12,135
chr10	108859400	.	CA	C	2351.66	PASS	AB=0.550;AC=23;AF=0.411;AN=56;BaseQRankSum=9.080;DP=446;FS=14.098;HRun=10;HaplotypeScore=55.3962;InbreedingCoeff=0.8579;MQ=65.78;MQ0=7;MQRankSum=-0.739;QD=15.57;ReadPosRankSum=1.362;VQSLOD=2.5664;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:99:0,99,1095	0/0:8,0:8:21.04:0,21,223	0/0:24,0:11:22.24:0,22,175	0/0:26,0:9:17.38:0,17,142	1/1:9,11:20:39.85:340,40,0	1/1:1,14:15:35.99:312,36,0	1/1:5,7:12:20.87:166,21,0	0/0:20,0:19:54.13:0,54,584	1/1:5,5:10:17.97:151,18,0	0/0:18,0:18:42.11:0,42,457	0/0:6,0:6:12.03:0,12,133	1/1:4,8:12:4.40:186,4,0	0/1:2,9:11:9.17:158,0,9	1/1:2,7:10:20.03:162,20,0	1/1:2,15:17:44.99:391,45,0	0/0:14,0:14:30.08:0,30,332	0/0:33,0:33:90.23:0,90,988	0/0:25,0:27:59.91:0,60,617	0/0:16,1:17:19.01:0,19,411	0/0:13,1:14:10.04:0,10,339	0/0:13,0:13:29.91:0,30,312	1/1:4,0:4:5.99:50,6,0	1/1:3,6:9:11.99:104,12,0	1/1:0,16:15:35.99:313,36,0	1/1:3,10:14:26.99:234,27,0	0/0:16,0:17:26.89:0,27,267	0/0:14,0:14:30.06:0,30,317	0/0:3,0:2:4.25:0,4,37
chr10	108863094	.	TA	T	4025.18	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=5.621;DP=605;FS=4.380;HRun=7;HaplotypeScore=72.3914;InbreedingCoeff=0.9949;MQ=72.70;MQ0=0;MQRankSum=-0.147;QD=25.97;ReadPosRankSum=5.141;VQSLOD=4.1946;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.21:0,81,976	0/0:12,0:12:30.10:0,30,377	0/0:17,1:17:31.93:0,32,278	0/0:10,0:10:16.77:0,17,134	0/0:27,0:27:72.22:0,72,890	0/0:18,0:18:48.14:0,48,591	0/0:12,0:12:30.08:0,30,363	0/0:37,0:37:99:0,102,1194	0/0:23,0:23:57.18:0,57,717	0/0:24,0:24:69.22:0,69,867	0/0:34,0:34:99:0,99,1210	1/1:2,15:17:42.10:428,42,0	1/1:2,17:19:48.11:490,48,0	1/1:2,18:20:51.11:520,51,0	1/1:3,29:32:84.19:857,84,0	0/0:21,0:21:60.19:0,60,754	0/0:16,0:16:45.06:0,45,518	0/0:23,0:23:66.19:0,66,816	0/0:28,0:28:78.24:0,78,970	0/0:24,0:24:63.20:0,63,793	0/0:17,0:17:42.12:0,42,515	1/1:1,24:25:66.06:659,66,0	1/1:1,25:26:66.15:673,66,0	1/1:1,15:16:39.09:398,39,0	0/0:21,0:21:60.15:0,60,725	0/0:26,0:26:72.22:0,72,894	0/0:25,0:25:69.20:0,69,853	0/0:5,0:5:15.05:0,15,189
chr10	108865611	.	CGTGTGT	C	2193.48	PASS	AB=0.921;AC=27;AF=0.540;AN=50;BaseQRankSum=7.412;DP=720;FS=2.195;HRun=0;HaplotypeScore=147.3704;InbreedingCoeff=0.6204;MQ=63.93;MQ0=16;MQRankSum=-7.515;QD=5.39;ReadPosRankSum=2.352;VQSLOD=2.6804;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:21.07:0,21,476	0/1:18,1:19:33.49:33,0,484	./.	./.	1/1:17,2:21:9.03:162,9,0	1/1:14,6:19:9.03:182,9,0	1/1:30,4:33:3.01:61,3,0	0/0:24,0:24:6.45:0,6,70	1/1:17,5:23:6.02:82,6,0	0/0:20,0:20:12.04:0,12,238	0/0:21,0:21:18.06:0,18,465	1/1:26,6:33:20.21:318,20,0	1/1:20,8:29:20.26:385,20,0	1/1:19,3:23:12.02:165,12,0	1/1:22,7:30:15.05:283,15,0	0/1:25,0:28:9.56:10,0,706	0/1:36,0:40:12.51:13,0,1065	0/0:25,0:32:51.17:0,51,1151	./.	0/0:20,0:19:9.03:0,9,255	0/0:39,0:42:36.12:0,36,859	1/1:20,6:26:9.70:117,10,0	1/1:12,6:17:6.02:103,6,0	1/1:21,10:32:9.50:145,10,0	1/1:15,7:24:18.06:326,18,0	0/0:15,0:17:15.52:0,16,211	0/0:14,0:15:9.03:0,9,180	0/0:9,0:9:9.82:0,10,296
chr10	108866415	.	G	GAA	5662.37	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-8.447;DP=550;FS=2.770;HRun=10;HaplotypeScore=62.1206;InbreedingCoeff=0.9697;MQ=58.26;MQ0=9;MQRankSum=-1.978;QD=24.41;ReadPosRankSum=-0.739;VQSLOD=4.3549;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,33:38:57.19:844,57,0	0/0:9,0:9:27.02:0,27,258	0/0:17,0:7:20.78:0,21,188	0/0:16,0:10:26.22:0,26,210	0/0:28,0:28:56.99:0,57,628	0/0:18,1:19:3.39:0,3,406	0/0:22,0:22:48.08:0,48,487	1/1:19,13:31:68.35:798,68,0	0/0:18,0:18:48.08:0,48,486	0/0:23,0:23:62.80:0,63,616	0/0:15,0:14:36.07:0,36,364	0/0:11,0:10:18:0,18,176	0/0:18,0:18:50.84:0,51,496	0/0:15,0:15:33.42:0,33,377	0/0:14,0:15:35.78:0,36,409	0/0:17,0:17:43.53:0,44,413	1/1:7,27:34:54.15:774,54,0	1/1:2,17:19:24.08:358,24,0	1/1:4,17:18:21.15:614,21,0	1/1:2,15:17:30.36:402,30,0	1/1:1,7:8:15.05:223,15,0	0/0:21,0:21:46.63:0,47,461	0/0:19,0:19:41.77:0,42,466	0/0:17,0:18:50.85:0,51,499	0/0:16,0:15:27.05:0,27,274	1/1:1,22:25:65.16:850,65,0	1/1:7,13:20:29.59:413,30,0	1/1:1,10:12:27.08:385,27,0
chr10	108866725	.	TACACACACACAC	T	3445.51	PASS	AB=0.969;AC=16;AF=0.296;AN=54;BaseQRankSum=7.619;DP=522;FS=3.853;HRun=0;HaplotypeScore=176.0429;InbreedingCoeff=0.6848;MQ=67.99;MQ0=13;MQRankSum=-7.743;QD=19.36;ReadPosRankSum=1.761;VQSLOD=2.2735;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:36.19:0,36,1897	0/0:10,0:11:21.07:0,21,990	./.	0/0:31,0:24:3.01:0,3,65	0/0:23,0:22:2.52:0,3,150	0/0:23,0:23:1.41:0,1,3	0/0:16,0:15:3.48:0,3,174	0/0:14,0:14:9.03:0,9,387	0/0:12,0:11:3.01:0,3,131	0/0:15,0:14:19.87:0,20,870	0/0:12,0:13:15.05:0,15,788	1/1:15,6:20:12.51:414,13,0	1/1:8,5:13:9.03:310,9,0	1/1:6,6:12:18.06:620,18,0	1/1:10,9:20:14.73:432,15,0	0/0:16,0:16:15.05:0,15,842	0/1:28,1:30:55.14:55,0,2164	0/0:14,0:16:30.08:0,30,1314	0/0:17,0:17:22.80:0,23,934	0/0:13,0:12:15.05:0,15,695	0/0:23,0:27:48.16:0,48,2348	1/1:8,10:20:30.10:994,30,0	1/1:13,9:22:9.03:310,9,0	1/1:14,10:24:9.35:311,9,0	0/1:16,0:15:0.25:0,0,0	0/0:14,0:13:18.05:0,18,674	0/0:11,0:12:24.08:0,24,1294	0/0:5,0:5:9.03:0,9,521
chr10	108868075	.	CGTGTGTGT	C	1073.72	PASS	AB=0.833;AC=11;AF=0.212;AN=52;BaseQRankSum=3.309;DP=454;FS=0.906;HRun=0;HaplotypeScore=134.5369;InbreedingCoeff=0.6237;MQ=52.10;MQ0=19;MQRankSum=-5.884;QD=14.32;ReadPosRankSum=-0.609;VQSLOD=2.3159;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:33:23.34:0,23,233	0/0:5,0:4:3.48:0,3,74	./.	./.	0/0:8,0:10:8.21:0,8,101	0/0:18,0:17:9.03:0,9,317	0/0:26,0:30:38.33:0,38,929	0/0:22,0:22:6.06:0,6,28	0/0:12,0:14:30.06:0,30,524	0/0:5,0:5:3.01:0,3,54	0/0:12,0:12:5.90:0,6,89	1/1:6,6:12:6.02:146,6,0	1/1:6,2:8:14.88:288,15,0	0/1:8,2:10:0:0,0,0	1/1:8,8:19:23.97:509,24,0	0/0:14,0:13:18.06:0,18,677	0/0:26,0:29:24.87:0,25,246	0/0:16,0:21:8.82:0,9,207	0/0:20,0:22:11.81:0,12,119	0/0:4,0:5:11.97:0,12,96	0/0:19,0:13:6.02:0,6,98	1/1:7,6:13:9.03:220,9,0	1/1:11,0:13:3.01:56,3,0	0/0:12,8:19:0:0,0,0	0/0:9,0:13:12.02:0,12,217	0/0:17,0:18:5.17:0,5,187	0/0:9,0:11:1.53:0,2,69	0/0:15,0:18:29.09:0,29,234
chr10	108868142	.	GT	G	4643.12	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=5.181;DP=413;FS=12.978;HRun=6;HaplotypeScore=71.9258;InbreedingCoeff=0.9747;MQ=69.79;MQ0=1;MQRankSum=-2.184;QD=25.94;ReadPosRankSum=1.148;VQSLOD=4.2761;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:23:50.85:545,51,0	0/0:2,0:2:6.02:0,6,79	0/0:14,0:13:24.22:0,24,389	0/0:12,0:10:18.01:0,18,198	0/0:18,0:18:48.63:0,49,632	0/0:14,0:14:42.14:0,42,552	0/0:24,0:24:69.19:0,69,886	1/1:0,10:10:24.06:258,24,0	0/0:18,0:18:50.79:0,51,600	0/0:9,0:9:27.09:0,27,354	0/0:15,0:15:42.09:0,42,497	0/0:10,0:10:22.62:0,23,275	0/0:10,0:10:17.03:0,17,166	0/0:5,0:5:15.05:0,15,192	0/0:21,0:21:54.91:0,55,645	0/0:11,0:11:33.10:0,33,421	1/1:4,26:30:74.81:781,75,0	1/1:2,17:19:45.11:481,45,0	1/1:3,8:11:25.83:249,26,0	1/1:2,7:9:21.05:225,21,0	1/1:3,20:23:49.22:541,49,0	0/0:6,0:6:15.02:0,15,166	0/0:12,0:12:36.07:0,36,454	0/0:17,0:16:36.11:0,36,473	0/0:16,0:16:42.14:0,42,552	1/1:1,21:22:63.13:664,63,0	1/1:3,21:24:65.38:681,65,0	1/1:2,6:8:23.42:217,23,0
chr10	108870874	.	G	GTTTTTTTTT	5912.81	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=3.193;DP=546;FS=9.109;HRun=8;HaplotypeScore=153.3970;InbreedingCoeff=0.6357;MQ=57.13;MQ0=15;MQRankSum=-8.601;QD=14.18;ReadPosRankSum=-5.828;VQSLOD=-0.3497;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:23:56.56:473,57,0	0/0:7,0:7:21.05:0,21,444	0/0:37,0:14:0.15:0,0,98	0/0:36,0:14:14.88:0,15,170	1/1:23,0:23:4.35:207,4,0	0/1:17,0:16:14.09:48,0,14	0/1:15,0:15:1.62:167,0,2	1/1:39,0:36:63.45:489,63,0	0/1:17,0:17:8.24:159,0,8	0/0:23,0:22:54.02:0,54,1002	0/0:18,0:18:48.01:0,48,1065	1/1:8,0:15:20.33:274,20,0	1/1:11,0:11:28.42:229,28,0	1/1:12,0:13:29.39:225,29,0	1/1:10,0:17:23.86:281,24,0	0/0:8,0:8:24.04:0,24,469	1/1:2,19:21:11.98:213,12,0	1/1:24,0:29:38.19:678,38,0	1/1:14,0:11:30.02:321,30,0	1/1:27,0:27:35.86:369,36,0	1/1:4,0:4:11.90:84,12,0	1/1:5,0:22:16.52:307,17,0	1/1:16,0:15:12.75:94,13,0	1/1:10,0:10:8.62:67,9,0	1/1:23,0:24:1.80:240,2,0	1/1:25,0:24:51.71:498,52,0	1/1:15,0:15:32.86:333,33,0	1/1:12,0:12:14.94:157,15,0
chr10	108870879	.	T	TTG	3621.25	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-1.819;DP=550;FS=3.293;HRun=0;HaplotypeScore=100.0088;InbreedingCoeff=0.3860;MQ=56.96;MQ0=15;MQRankSum=-0.678;QD=15.54;ReadPosRankSum=5.249;VQSLOD=3.2043;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:55.61:0,56,362	0/0:9,0:9:24.07:0,24,340	0/0:37,0:13:19.30:0,19,259	0/0:39,0:16:17.58:0,18,235	1/1:7,19:25:56.73:812,57,0	1/1:4,13:16:21.06:361,21,0	1/1:1,14:16:30.10:521,30,0	0/0:36,0:32:62.82:0,63,452	1/1:3,13:17:15.23:529,15,0	0/0:22,0:21:57.19:0,57,835	0/0:20,0:20:57.15:0,57,792	0/1:15,0:14:64.87:65,0,70	0/1:11,0:11:50.32:50,0,108	1/1:13,0:12:10.73:178,11,0	0/1:18,0:17:56.52:57,0,120	0/0:10,0:10:30.08:0,30,411	0/0:20,0:20:5.58:0,6,43	0/1:29,0:28:68.61:127,0,69	0/0:14,0:11:19.43:0,19,147	0/0:26,0:26:6.66:0,7,141	0/0:5,0:5:10.87:0,11,59	0/1:22,0:21:25.88:26,0,40	0/1:16,0:15:15.47:15,0,98	0/1:9,0:9:26.36:26,0,43	1/1:3,21:24:51.17:853,51,0	0/0:23,0:22:45.70:0,46,337	0/0:15,0:15:23.65:0,24,168	0/0:17,0:17:5.54:0,6,44
chr10	108870880	.	T	TG	1118.09	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=1.714;DP=540;FS=2.081;HRun=0;HaplotypeScore=101.5121;InbreedingCoeff=0.5219;MQ=56.86;MQ0=15;MQRankSum=1.338;QD=6.14;ReadPosRankSum=4.104;VQSLOD=3.2131;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:46.77:0,47,360	0/0:10,0:10:27.05:0,27,342	0/0:38,0:13:19.99:0,20,213	0/0:38,0:16:17.51:0,18,213	1/1:24,1:24:28.65:301,29,0	1/1:14,0:13:18.84:109,19,0	1/1:15,0:15:29.18:170,29,0	0/0:34,0:30:66.23:0,66,468	1/1:17,0:17:13.96:164,14,0	0/0:22,0:21:60.19:0,60,809	0/0:20,0:20:60.15:0,60,773	0/1:15,0:14:30.75:31,0,83	0/1:11,0:11:18.47:18,0,106	1/1:13,0:12:7.53:180,8,0	0/1:18,0:17:15.49:15,0,116	0/0:10,0:10:30.08:0,30,389	0/0:20,0:20:6.10:0,6,62	0/0:29,0:28:44.87:0,45,273	0/0:14,0:11:26.18:0,26,181	0/0:26,0:26:15.46:0,15,134	0/0:6,0:6:7.50:0,7,52	0/1:23,0:22:5.70:6,0,32	0/0:7,8:15:4.02:0,4,92	0/1:9,0:9:25.87:26,0,42	1/1:22,0:22:47.32:286,47,0	0/0:21,0:20:47.93:0,48,346	0/0:15,0:15:26.63:0,27,183	0/0:15,0:15:10.82:0,11,57
chr10	108870881	.	TTG	T	2479.37	PASS	AB=0.944;AC=37;AF=0.661;AN=56;BaseQRankSum=5.721;DP=538;FS=2.095;HRun=0;HaplotypeScore=101.5121;InbreedingCoeff=0.4262;MQ=55.89;MQ0=15;MQRankSum=-2.006;QD=6.17;ReadPosRankSum=-1.678;VQSLOD=3.1732;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:23:38:301,38,0	0/0:10,0:10:30.06:0,30,414	0/0:37,0:13:28.62:0,29,278	0/0:37,0:15:23.58:0,24,248	1/1:25,0:24:43.17:218,43,0	1/1:14,0:13:16.35:70,16,0	1/1:15,0:15:17.15:67,17,0	0/1:34,0:30:45.36:126,0,45	1/1:17,0:17:14.86:90,15,0	0/0:21,0:20:57.17:0,57,905	0/0:20,0:20:57.11:0,57,849	1/1:15,0:14:17.94:116,18,0	0/1:11,0:11:14.18:61,0,14	0/1:13,0:12:11.14:52,0,11	0/1:19,0:18:19.39:82,0,19	0/0:10,0:10:30.04:0,30,411	1/1:20,0:20:17.63:128,18,0	0/1:14,14:27:16.81:208,0,17	1/1:14,0:11:19.02:136,19,0	1/1:26,0:26:17.81:117,18,0	0/1:6,0:6:2.24:78,0,2	1/1:23,0:22:11.27:98,11,0	0/1:15,1:15:35.27:51,0,35	1/1:9,0:9:1.29:47,1,0	1/1:21,0:21:35.88:161,36,0	1/1:22,0:21:17.94:254,18,0	1/1:15,0:15:12.38:125,12,0	1/1:15,0:15:12.82:90,13,0
chr10	108870882	.	TG	T	4206.92	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=9.202;DP=540;FS=2.843;HRun=1;HaplotypeScore=90.5698;InbreedingCoeff=0.9682;MQ=54.80;MQ0=15;MQRankSum=-5.793;QD=10.34;ReadPosRankSum=0.409;VQSLOD=1.5751;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:54.75:372,55,0	0/0:10,0:10:30.05:0,30,337	0/0:36,0:12:30.37:0,30,235	0/0:35,1:14:15.43:0,15,178	1/1:25,0:24:55.80:373,56,0	1/1:13,0:12:20.71:141,21,0	1/1:14,0:14:29.38:184,29,0	1/1:33,0:29:42.65:276,43,0	1/1:17,0:17:27.09:223,27,0	0/0:20,0:19:57.18:0,57,710	0/0:20,0:20:60.12:0,60,699	1/1:15,0:14:21.84:139,22,0	1/1:11,0:11:25.11:141,25,0	1/1:12,1:12:23.51:118,24,0	1/1:19,0:18:21.72:141,22,0	0/0:10,0:10:30.04:0,30,334	1/1:20,0:20:20.65:142,21,0	1/1:27,0:27:17.99:175,18,0	1/1:15,0:12:25.73:193,26,0	1/1:25,1:26:29.10:174,29,0	1/1:6,0:6:12.91:93,13,0	1/1:21,1:21:18.78:116,19,0	1/1:17,1:17:11.43:97,11,0	1/1:9,0:9:12.67:86,13,0	1/1:21,0:21:49.92:332,50,0	1/1:23,0:22:51.90:395,52,0	1/1:15,0:15:29.16:192,29,0	1/1:19,0:19:14.86:105,15,0
chr10	108870887	.	T	TTTTTTG	3057.88	PASS	AB=0.981;AC=28;AF=0.500;AN=56;BaseQRankSum=6.191;DP=540;FS=12.586;HRun=0;HaplotypeScore=142.6477;InbreedingCoeff=0.1059;MQ=55.03;MQ0=14;MQRankSum=-1.849;QD=8.07;ReadPosRankSum=-0.420;VQSLOD=2.0003;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:23.97:256,24,0	0/0:11,0:11:30.10:0,30,611	0/0:34,0:13:34.57:0,35,425	0/0:36,0:13:20.70:0,21,267	0/1:25,0:24:24.55:25,0,68	0/0:13,0:12:2.43:0,2,30	0/0:14,0:14:6.37:0,6,19	0/1:34,0:31:6.35:315,0,6	1/1:16,0:16:2.34:34,2,0	0/0:22,0:21:57.15:0,57,1079	0/0:22,0:22:63.20:0,63,1268	0/1:14,0:13:12.10:85,0,12	0/1:13,0:13:11.42:11,0,53	0/1:14,0:13:22.15:22,0,81	0/1:16,0:15:8.50:9,0,91	0/0:9,0:9:27.09:0,27,579	1/1:17,0:18:23.79:332,24,0	0/1:20,0:26:15.34:581,0,15	1/1:13,0:12:31.26:319,31,0	1/1:9,0:29:24.40:268,24,0	0/1:6,0:6:1.95:156,0,2	0/1:16,0:15:96.18:99,0,96	0/1:15,0:14:3.13:3,0,66	0/1:11,0:11:58.40:58,0,67	0/1:23,0:23:26.54:27,0,37	1/1:26,0:25:33.89:413,34,0	1/1:9,0:17:1.22:117,1,0	1/1:2,13:18:2.95:105,3,0
chr10	108872444	.	A	AG	3505.22	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-9.399;DP=687;FS=6.521;HRun=7;HaplotypeScore=69.9159;InbreedingCoeff=0.9921;MQ=74.04;MQ0=0;MQRankSum=-1.146;QD=29.46;ReadPosRankSum=-0.679;VQSLOD=3.8512;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,1151	0/0:10,0:10:24.04:0,24,232	0/0:14,0:14:22.45:0,22,218	0/0:20,0:20:21.36:0,21,337	1/1:3,8:11:17.70:216,18,0	1/1:1,22:23:51.16:613,51,0	1/1:3,39:42:99:1301,108,0	0/0:27,0:27:63.09:0,63,608	1/1:1,15:16:45.14:543,45,0	0/0:24,0:24:69.10:0,69,662	0/0:15,0:15:36.05:0,36,347	0/0:25,0:25:63.09:0,63,608	0/0:31,0:31:78.11:0,78,752	0/0:17,0:17:42.07:0,42,406	0/0:27,0:27:75.12:0,75,724	0/0:24,0:24:60.08:0,60,579	0/0:49,0:49:99:0,132,1274	0/0:29,0:29:81.13:0,81,782	0/0:18,0:18:51.07:0,51,488	0/0:17,0:17:42.06:0,42,405	0/0:45,0:45:99:0,123,1182	0/0:7,0:7:18.03:0,18,174	0/0:18,0:18:51.08:0,51,492	0/0:48,0:48:99:0,126,1216	1/1:2,25:27:69.21:832,69,0	0/0:27,0:27:72.04:0,72,680	0/0:27,0:27:72.99:0,73,692	0/0:6,0:6:18.03:0,18,174
chr10	108874175	.	GTTGGC	G	10649.94	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.923;DP=665;FS=0.000;HRun=0;HaplotypeScore=130.6165;InbreedingCoeff=0.9997;MQ=83.69;MQ0=0;MQRankSum=-5.491;QD=60.86;ReadPosRankSum=3.660;VQSLOD=5.5962;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,166,5478	0/0:10,0:10:30.10:0,30,884	0/0:22,0:22:66.23:0,66,1922	0/0:19,0:19:54.18:0,54,1482	0/0:23,0:23:66.21:0,66,2115	0/0:25,0:25:72.25:0,72,2319	0/0:32,0:32:96.32:0,96,3057	0/0:21,0:21:60.21:0,60,1999	0/0:26,0:26:78.27:0,78,2537	0/0:19,0:19:57.20:0,57,1900	0/0:13,0:13:39.13:0,39,1221	1/1:0,32:32:78.27:1817,78,0	1/1:1,17:18:48.16:1114,48,0	1/1:0,29:29:84.29:1947,84,0	1/1:0,34:34:93.32:2166,93,0	0/0:30,0:30:90.30:0,90,2874	0/0:32,0:32:93.29:0,93,3020	0/0:25,0:25:75.22:0,75,2288	0/0:17,0:17:51.15:0,51,1492	0/0:21,0:21:63.22:0,63,2042	0/0:22,0:22:66.23:0,66,2197	1/1:0,19:19:51.18:1184,51,0	1/1:1,16:17:42:977,42,0	1/1:0,26:26:63.04:1446,63,0	0/0:21,0:21:63.19:0,63,2018	0/0:22,0:22:66.23:0,66,2143	0/0:26,0:25:78.27:0,78,2513	0/0:9,0:9:27.09:0,27,893
chr10	108881912	.	C	CCGAT	3785.72	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-6.711;DP=509;FS=4.587;HRun=0;HaplotypeScore=89.3320;InbreedingCoeff=0.9775;MQ=73.37;MQ0=0;MQRankSum=-6.309;QD=47.92;ReadPosRankSum=-0.242;VQSLOD=4.2564;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:60.21:0,60,1079	0/0:12,0:12:30.10:0,30,539	0/0:18,0:17:42.14:0,42,735	0/0:15,0:15:33.58:0,34,589	1/1:5,4:9:11.17:310,11,0	1/1:1,7:9:18.06:469,18,0	1/1:7,25:32:43.06:1913,43,0	0/0:25,0:25:57.19:0,57,1010	1/1:4,8:13:24.08:621,24,0	0/0:18,0:18:39.13:0,39,704	0/0:18,0:18:36.12:0,36,655	0/0:24,0:24:66.23:0,66,1200	0/0:16,0:16:39.13:0,39,702	0/0:17,0:17:51.17:0,51,927	0/0:17,0:17:39.13:0,39,709	0/0:15,0:15:45.14:0,45,781	0/0:33,0:33:93.32:0,93,1677	0/0:22,0:22:66.23:0,66,1190	0/0:14,0:14:36.11:0,36,626	0/0:10,0:10:24.08:0,24,436	0/0:47,0:46:99:0,117,2098	0/0:9,0:9:21.07:0,21,382	0/0:8,0:8:12.04:0,12,218	0/0:25,0:25:69.19:0,69,1209	1/1:8,7:16:18.53:471,19,0	0/0:15,0:15:42.13:0,42,734	0/0:19,0:19:54.15:0,54,940	0/0:7,0:7:21.07:0,21,382
chr10	108884139	.	TGCGCGC	T	754.76	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=0.017;DP=570;FS=6.261;HRun=0;HaplotypeScore=128.6034;InbreedingCoeff=0.8400;MQ=54.64;MQ0=10;MQRankSum=-1.920;QD=9.20;ReadPosRankSum=0.949;VQSLOD=2.1496;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:60.21:0,60,1371	0/0:13,0:13:18.95:0,19,372	./.	0/0:21,0:6:3.01:0,3,32	1/1:7,2:9:6.08:78,6,0	1/1:9,1:10:3.27:122,3,0	1/1:6,22:28:3.48:54,3,0	0/0:28,0:27:59.05:0,59,1100	1/1:15,1:15:21.45:325,21,0	0/0:25,0:25:61.78:0,62,1342	0/0:5,0:5:15.05:0,15,441	0/0:23,0:23:20.42:0,20,179	0/0:17,0:17:20.40:0,20,131	0/0:29,0:29:55.57:0,56,447	0/0:31,0:31:40.68:0,41,358	0/0:16,0:16:33.11:0,33,792	0/0:21,0:21:53.54:0,54,1116	0/0:27,0:27:57.88:0,58,1235	0/0:20,0:20:43.70:0,44,719	0/0:13,0:13:35.94:0,36,667	0/0:47,0:47:99:0,99,2139	0/0:12,0:12:23.23:0,23,184	0/0:10,0:10:23.70:0,24,178	0/0:28,0:28:44.50:0,45,618	1/1:15,4:19:17.34:326,17,0	0/0:27,0:27:62.58:0,63,1393	0/0:19,0:17:48.13:0,48,961	0/0:9,0:10:30.10:0,30,731
chr10	108884148	.	G	GCACACACA	661.32	PASS	AB=0.943;AC=16;AF=0.308;AN=52;BaseQRankSum=3.739;DP=536;FS=8.582;HRun=0;HaplotypeScore=154.7000;InbreedingCoeff=0.3970;MQ=49.99;MQ0=12;MQRankSum=0.340;QD=3.08;ReadPosRankSum=-2.521;VQSLOD=1.7591;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:65.21:0,65,1121	0/0:10,0:10:18.06:0,18,270	./.	./.	0/0:7,0:7:1.08:0,1,4	0/1:10,0:10:9.13:36,0,9	1/1:33,0:32:9.89:107,10,0	0/0:25,0:23:48.65:0,49,545	0/1:13,0:12:6.98:17,0,7	0/0:28,0:28:71.28:0,71,1132	0/0:5,0:5:15.02:0,15,229	0/1:12,10:25:0.69:114,0,1	0/1:15,0:15:3.63:19,0,4	1/1:25,0:25:0.49:100,0,0	1/1:25,0:25:0.35:19,0,0	0/0:16,0:16:38.82:0,39,538	0/0:21,0:21:27.74:0,28,836	0/0:21,0:21:43.58:0,44,675	0/0:15,0:15:35.14:0,35,426	0/0:14,0:13:35.48:0,35,424	0/0:48,0:48:80.29:0,80,1383	1/1:11,0:11:6.03:81,6,0	1/1:9,0:9:4.02:46,4,0	0/1:32,0:32:60.49:186,0,60	0/1:17,0:17:9.05:90,0,9	0/0:26,0:26:60.92:0,61,852	0/0:22,0:20:44.98:0,45,676	0/0:11,0:11:33.08:0,33,580
chr10	108884248	.	GGCCT	G	3665.98	PASS	AB=0.875;AC=11;AF=0.196;AN=56;BaseQRankSum=10.568;DP=516;FS=15.926;HRun=0;HaplotypeScore=89.9920;InbreedingCoeff=0.8444;MQ=70.36;MQ0=0;MQRankSum=-0.235;QD=40.73;ReadPosRankSum=2.048;VQSLOD=3.1988;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.28:0,81,2088	0/0:10,0:10:27.09:0,27,703	0/1:6,0:7:10.20:10,0,103	0/0:10,0:10:21.07:0,21,432	1/1:2,7:9:9.50:164,10,0	1/1:2,11:13:27.09:491,27,0	1/1:5,32:37:93.32:1691,93,0	0/0:21,0:21:51.17:0,51,1236	1/1:0,15:15:45.15:818,45,0	0/0:16,0:16:39.10:0,39,890	0/0:2,0:2:3.01:0,3,79	0/0:22,0:22:66.23:0,66,1699	0/0:22,0:22:66.20:0,66,1653	0/0:23,0:23:69.24:0,69,1778	0/0:24,0:24:63.22:0,63,1636	0/0:14,0:14:39.12:0,39,956	0/0:24,0:24:72.25:0,72,1874	0/0:27,0:27:78.27:0,78,2043	0/0:14,0:14:33.11:0,33,862	0/0:9,0:9:21.07:0,21,550	0/0:65,0:65:99:0,175,4428	0/0:7,0:7:18.06:0,18,471	0/0:10,0:10:24.04:0,24,468	0/0:40,0:40:99:0,108,2728	1/1:0,9:9:27.09:491,27,0	0/0:16,0:16:39.13:0,39,1012	0/0:9,0:9:24.08:0,24,628	0/0:11,0:11:33.11:0,33,862
chr10	108885779	.	C	CTT	4461.22	PASS	AB=0.659;AC=38;AF=0.679;AN=56;BaseQRankSum=2.583;DP=620;FS=5.581;HRun=13;HaplotypeScore=95.7806;InbreedingCoeff=0.4695;MQ=67.62;MQ0=2;MQRankSum=-0.737;QD=9.12;ReadPosRankSum=-1.520;VQSLOD=3.0132;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,1:42:9.53:202,10,0	0/0:12,0:14:14.64:0,15,176	0/0:16,0:12:19.06:0,19,119	0/0:17,0:11:4.91:0,5,21	1/1:22,0:24:20.62:169,21,0	1/1:20,0:20:9.07:80,9,0	1/1:9,0:26:14.94:134,15,0	0/1:19,0:31:13.54:92,0,14	1/1:24,1:24:31.43:275,31,0	0/0:27,0:30:56.10:0,56,516	0/0:25,0:28:48.75:0,49,483	1/1:4,22:29:46.61:543,47,0	1/1:2,9:12:23.57:294,24,0	1/1:5,10:20:37.21:426,37,0	1/1:6,13:25:37.03:370,37,0	0/0:22,0:26:47.84:0,48,466	0/1:6,0:16:17.47:31,0,17	1/1:7,0:25:9.01:86,9,0	0/1:9,1:17:1.98:121,0,2	0/1:7,0:16:23.29:36,0,23	0/1:5,0:15:19.88:53,0,20	1/1:14,4:20:44.16:414,44,0	1/1:1,9:14:26.53:302,27,0	1/1:5,13:20:12.45:311,12,0	1/1:13,0:32:18.03:172,18,0	1/1:9,1:31:6.73:217,7,0	1/1:8,0:17:17.47:61,17,0	0/1:5,1:11:30.91:73,0,31
chr10	108887106	.	TCCCCC	T	7336.01	PASS	AB=0.630;AC=41;AF=0.732;AN=56;BaseQRankSum=2.120;DP=504;FS=13.851;HRun=14;HaplotypeScore=118.2193;InbreedingCoeff=0.6642;MQ=69.72;MQ0=1;MQRankSum=-1.116;QD=16.75;ReadPosRankSum=6.664;VQSLOD=0.5655;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,20:28:48.03:795,48,0	0/0:7,0:8:8.99:0,9,161	0/0:17,0:13:25.47:0,25,334	0/0:17,0:13:1.57:0,2,78	1/1:5,1:12:10.28:77,10,0	1/1:8,1:20:10.76:111,11,0	1/1:5,2:29:45.60:247,46,0	1/1:10,18:28:41.90:615,42,0	1/1:8,0:21:24.65:104,25,0	0/0:6,0:6:12.01:0,12,179	0/0:6,0:6:15.05:0,15,292	1/1:4,1:22:32.86:161,33,0	1/1:4,1:17:19.66:113,20,0	1/1:9,2:30:51.46:281,51,0	1/1:5,2:18:15.89:136,16,0	0/0:7,0:8:14.80:0,15,233	1/1:4,25:29:63.10:1041,63,0	1/1:1,24:25:57.18:944,57,0	1/1:7,6:14:23.52:305,24,0	1/1:6,7:13:14.92:228,15,0	1/1:9,24:34:44.61:706,45,0	0/1:4,0:10:13.05:24,0,13	0/1:3,0:7:3.10:11,0,3	1/1:10,1:25:31.28:158,31,0	1/1:5,1:15:20.37:114,20,0	0/1:7,10:17:42.15:417,0,42	1/1:4,14:18:40.29:599,40,0	1/1:2,4:6:8.97:149,9,0
chr10	108887916	.	GT	G	10647.83	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=7.391;DP=621;FS=2.585;HRun=10;HaplotypeScore=65.5587;InbreedingCoeff=0.9798;MQ=73.57;MQ0=0;MQRankSum=-0.872;QD=20.76;ReadPosRankSum=2.789;VQSLOD=5.9726;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,37:46:74.88:878,75,0	0/0:7,0:7:18.03:0,18,190	0/0:22,0:22:16.50:0,16,279	0/0:9,0:8:10.98:0,11,138	1/1:3,12:15:35.98:311,36,0	1/1:2,9:11:26.99:234,27,0	1/1:3,27:30:77.98:677,78,0	1/1:6,30:36:86.94:752,87,0	1/1:4,22:26:59.97:521,60,0	0/0:17,0:17:39.09:0,39,418	0/0:12,0:12:36.08:0,36,389	1/1:2,23:25:32.82:514,33,0	1/1:3,18:21:47.98:417,48,0	1/1:3,21:24:56.97:495,57,0	1/1:3,23:26:65.98:573,66,0	0/0:37,1:38:76.21:0,76,1061	1/1:5,24:29:38.67:554,39,0	1/1:2,28:30:77.97:677,78,0	1/1:6,26:33:76.97:649,77,0	1/1:2,4:6:12:104,12,0	1/1:3,23:26:35.81:540,36,0	1/1:3,8:11:23.98:208,24,0	1/1:1,21:22:49.39:440,49,0	1/1:0,36:36:98.98:859,99,0	1/1:3,8:11:20.99:182,21,0	1/1:3,20:23:59.95:515,60,0	1/1:3,14:17:38.99:339,39,0	1/1:1,8:9:23.99:208,24,0
chr10	108888152	.	T	TC	541.58	PASS	AB=0.841;AC=17;AF=0.354;AN=48;BaseQRankSum=-0.202;DP=194;FS=11.144;HRun=9;HaplotypeScore=34.7233;InbreedingCoeff=0.2078;MQ=87.82;MQ0=0;MQRankSum=-2.102;QD=6.60;ReadPosRankSum=0.099;VQSLOD=-0.1035;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:12:17.98:70,0,18	0/0:3,0:3:9:0,9,78	0/0:19,1:18:10.57:0,11,215	0/0:12,0:11:18:0,18,119	1/1:3,0:3:2.99:24,3,0	./.	1/1:2,10:12:6.49:68,6,0	1/1:5,2:7:6.02:66,6,0	0/1:7,2:9:5.01:157,0,5	0/0:6,0:6:11.99:0,12,104	0/0:7,0:7:11.97:0,12,101	0/0:8,0:8:11.96:0,12,100	0/1:7,1:8:5.27:5,0,158	0/0:10,0:10:14.95:0,15,126	0/0:13,0:13:26.87:0,27,218	0/0:7,0:8:4.89:0,5,121	./.	0/1:4,0:4:16.97:57,0,17	1/1:5,0:5:8.98:86,9,0	./.	0/1:2,5:7:17.04:52,0,17	0/0:5,0:5:8.99:0,9,78	0/1:9,0:10:18.28:18,0,69	0/0:9,0:9:8.95:0,9,72	0/0:6,0:6:5.98:0,6,52	1/1:2,0:2:3.01:33,3,0	0/1:1,2:3:17.02:57,0,17	./.
chr10	108890005	.	TG	T	386.77	PASS	AB=0.920;AC=8;AF=0.143;AN=56;BaseQRankSum=-5.021;DP=488;FS=3.921;HRun=11;HaplotypeScore=105.5657;InbreedingCoeff=0.2896;MQ=77.63;MQ0=0;MQRankSum=1.055;QD=5.37;ReadPosRankSum=-1.346;VQSLOD=1.9255;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:19.57:0,20,95	1/1:0,3:3:5.99:49,6,0	0/0:13,0:12:0.52:0,1,22	0/1:15,1:14:3.50:3,0,5	0/0:7,0:7:14.59:0,15,89	0/0:10,0:10:6.34:0,6,39	0/0:18,0:19:8.52:0,9,42	0/0:8,0:8:5.27:0,5,22	0/0:8,0:8:2.80:0,3,13	0/1:14,3:17:49.81:50,0,136	0/1:7,1:8:14.98:40,0,15	0/0:28,0:30:53.23:0,53,219	0/0:21,0:25:37.11:0,37,158	0/0:23,0:23:32.01:0,32,138	0/0:27,0:28:47.89:0,48,207	1/1:2,16:18:44.95:369,45,0	0/0:31,0:31:14.20:0,14,71	0/0:21,0:22:15.51:0,16,68	0/0:14,0:14:11.02:0,11,51	0/1:10,0:10:1.49:1,0,9	0/0:31,0:31:1.84:0,2,10	0/0:13,0:14:23.78:0,24,99	0/0:14,0:14:24.43:0,24,128	0/0:40,0:46:92.45:0,92,391	0/0:9,0:9:3.42:0,3,25	0/0:12,0:13:8.49:0,8,43	0/0:20,0:20:10.96:0,11,47	0/0:0,0:3:2.84:0,3,14
chr10	108890006	.	G	GTGTGT	4376.78	PASS	AB=0.746;AC=18;AF=0.321;AN=56;BaseQRankSum=-2.999;DP=482;FS=69.341;HRun=0;HaplotypeScore=139.0276;InbreedingCoeff=0.7711;MQ=77.33;MQ0=0;MQRankSum=-4.710;QD=24.45;ReadPosRankSum=-4.262;VQSLOD=1.6415;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,7:28:67.45:67,0,69	0/0:3,0:3:6.02:0,6,91	0/0:13,0:12:33.91:0,34,505	0/0:15,0:13:18.63:0,19,368	0/0:8,0:8:16.32:0,16,128	0/0:12,0:12:12.33:0,12,169	0/0:19,0:19:23.84:0,24,339	1/1:5,1:8:16.11:325,16,0	0/0:10,0:10:11.67:0,12,163	0/0:17,0:17:39.12:0,39,754	0/0:9,0:9:15.01:0,15,158	0/0:27,0:27:64.07:0,64,1235	0/0:23,0:23:48.14:0,48,896	0/0:21,0:21:45.15:0,45,871	0/0:28,0:28:66.06:0,66,1174	0/0:17,0:17:48.15:0,48,703	1/1:24,6:31:51.17:1098,51,0	1/1:18,4:22:15.94:683,16,0	1/1:6,3:13:15.60:420,16,0	0/1:9,1:10:3.40:156,0,3	1/1:28,5:33:31.03:533,31,0	0/0:15,0:15:30.10:0,30,587	0/0:14,0:14:37.91:0,38,715	0/0:43,0:43:99:0,117,2279	0/0:9,0:9:11.48:0,11,118	1/1:11,1:12:4.79:420,5,0	1/1:17,2:19:29.79:600,30,0	1/1:3,0:3:3.01:74,3,0
chr10	108890015	.	G	GT	5959.62	PASS	AB=0.796;AC=42;AF=0.750;AN=56;BaseQRankSum=-1.879;DP=493;FS=1.198;HRun=0;HaplotypeScore=87.0598;InbreedingCoeff=0.5215;MQ=72.03;MQ0=0;MQRankSum=-0.240;QD=14.33;ReadPosRankSum=2.783;VQSLOD=6.4632;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:16:31.22:276,31,0	0/0:5,0:5:10.77:0,11,51	0/1:8,0:8:2.47:2,0,36	0/1:10,0:8:13.44:22,0,13	1/1:3,0:13:17.54:124,18,0	0/1:3,10:13:16.88:17,0,19	1/1:5,0:28:7.85:44,8,0	1/1:6,0:13:4.09:114,4,0	1/1:5,8:13:3:35,3,0	0/0:14,0:14:35.82:0,36,370	0/0:10,0:10:28.60:0,29,210	1/1:4,25:29:56.60:760,57,0	1/1:5,21:26:48.02:560,48,0	1/1:2,18:20:35.33:462,35,0	1/1:5,24:29:45.71:623,46,0	0/0:21,0:21:55.54:0,56,350	1/1:4,1:26:6.84:119,7,0	1/1:4,14:19:2.14:91,2,0	1/1:9,0:10:28.15:234,28,0	1/1:2,0:10:17.81:145,18,0	0/0:5,0:27:2.53:0,3,11	1/1:1,20:21:27.08:353,27,0	1/1:10,6:16:13.66:366,14,0	1/1:9,37:46:99:1281,102,0	1/1:3,0:12:8.90:61,9,0	1/1:3,9:12:26.62:201,27,0	0/1:8,0:21:1.65:33,0,2	1/1:4,0:4:5.73:35,6,0
chr10	108890600	.	C	CA	1507.61	PASS	AB=0.835;AC=17;AF=0.304;AN=56;BaseQRankSum=-2.309;DP=619;FS=2.094;HRun=12;HaplotypeScore=87.0065;InbreedingCoeff=0.2532;MQ=58.41;MQ0=19;MQRankSum=1.444;QD=5.42;ReadPosRankSum=-0.430;VQSLOD=2.3025;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:38,7:45:3.56:4,0,457	0/0:13,0:14:23.73:0,24,158	0/1:16,0:10:20.96:21,0,65	0/1:16,0:6:1.75:2,0,4	0/0:12,0:23:13.99:0,14,47	0/0:6,0:21:30.53:0,31,89	0/0:4,0:20:28.51:0,29,83	0/0:20,0:20:29.51:0,30,194	0/0:5,0:12:20.21:0,20,85	0/0:18,0:19:34.78:0,35,246	0/1:17,1:21:6.28:6,0,133	0/1:9,10:18:19.40:108,0,19	0/1:7,11:18:24.54:99,0,25	1/1:5,11:15:5.13:210,5,0	1/1:10,0:22:34.25:186,34,0	0/0:14,0:13:23.59:0,24,170	0/0:35,1:35:49.94:0,50,509	0/0:29,2:32:9.70:0,10,360	0/0:18,0:17:29.65:0,30,214	0/0:20,0:21:36.73:0,37,248	0/1:18,3:19:28.54:29,0,144	1/1:8,13:20:35.89:335,36,0	1/1:10,15:24:17.46:333,17,0	0/1:10,14:22:13.41:332,0,13	0/0:6,0:30:47.35:0,47,150	0/0:24,0:25:0.26:0,0,228	0/0:23,0:23:32.64:0,33,238	0/1:10,1:10:14.14:14,0,89
chr10	108891861	.	T	TG	2174.31	PASS	AB=0.647;AC=9;AF=0.161;AN=56;BaseQRankSum=-8.958;DP=580;FS=0.480;HRun=8;HaplotypeScore=60.5658;InbreedingCoeff=0.8606;MQ=74.90;MQ0=0;MQRankSum=0.668;QD=19.95;ReadPosRankSum=1.350;VQSLOD=3.4679;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:36:89.06:0,89,802	0/0:10,0:11:26.05:0,26,226	0/0:10,0:10:17.03:0,17,144	0/0:8,0:11:8.63:0,9,65	0/1:5,6:11:6.38:185,0,6	1/1:5,13:18:36.11:416,36,0	1/1:12,25:37:69.20:796,69,0	0/0:21,0:21:48.02:0,48,439	1/1:4,24:28:38.73:700,39,0	0/0:15,0:15:45.02:0,45,408	0/0:12,0:12:23.99:0,24,215	0/0:31,0:31:84.01:0,84,761	0/0:21,0:21:45.01:0,45,412	0/0:25,0:25:65.99:0,66,590	0/0:21,0:21:48:0,48,435	0/0:25,1:26:37.40:0,37,592	0/0:29,0:29:71.99:0,72,651	0/0:29,0:29:81:0,81,733	0/0:17,0:17:42.01:0,42,384	0/0:8,0:8:11.99:0,12,110	0/0:42,0:42:99:0,108,983	0/0:16,0:16:36:0,36,324	0/0:7,0:7:21.01:0,21,192	0/0:34,0:34:78.03:0,78,714	1/1:4,10:15:21.06:242,21,0	0/0:20,0:20:51.03:0,51,467	0/0:24,0:24:63.01:0,63,577	0/0:5,0:5:12:0,12,110
chr10	108894446	.	G	GT	4720.17	PASS	AB=0.817;AC=22;AF=0.393;AN=56;BaseQRankSum=-10.023;DP=658;FS=2.858;HRun=11;HaplotypeScore=73.5666;InbreedingCoeff=0.5702;MQ=73.53;MQ0=2;MQRankSum=0.179;QD=13.52;ReadPosRankSum=-0.296;VQSLOD=5.0278;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,39:48:78.70:951,79,0	0/0:8,0:8:23.90:0,24,185	0/0:26,0:20:21.51:0,22,166	0/1:27,0:23:35.91:36,0,75	0/1:30,3:33:2.89:3,0,456	0/0:33,0:34:86.71:0,87,651	0/0:18,0:18:38.82:0,39,302	1/1:4,16:21:27.69:441,28,0	0/0:17,0:17:38.75:0,39,294	0/0:25,1:26:29.30:0,29,410	0/0:20,0:20:18.33:0,18,282	0/1:13,2:15:19.06:19,0,233	0/0:17,1:18:17.36:0,17,318	0/0:23,0:23:53.75:0,54,416	0/1:20,2:22:1.12:1,0,358	0/0:17,1:18:20.36:0,20,341	1/1:4,25:32:70.97:723,71,0	1/1:0,21:21:51.10:518,51,0	0/1:10,9:19:27.92:256,0,28	0/1:4,15:22:15.33:366,0,15	1/1:7,24:31:10.63:465,11,0	0/0:33,3:36:25.67:0,26,566	0/0:18,2:20:20.32:0,20,339	0/0:26,1:27:29.29:0,29,408	0/0:18,0:18:41.81:0,42,325	1/1:9,13:22:4.41:385,4,0	1/1:3,20:22:21.85:403,22,0	1/1:2,8:10:15.03:152,15,0
chr10	108895937	.	AAGAGACTTACG	A	22374.85	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=19.280;DP=730;FS=9.370;HRun=0;HaplotypeScore=242.7810;InbreedingCoeff=0.9997;MQ=78.35;MQ0=0;MQRankSum=-20.060;QD=78.23;ReadPosRankSum=1.889;VQSLOD=3.4443;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:66:99:0,196,10046	0/0:13,0:13:39.13:0,39,2146	0/0:31,0:31:75.04:0,75,3874	0/0:22,0:22:66.23:0,66,3043	1/1:0,29:29:78.05:2256,78,0	1/1:1,17:18:51.18:1798,51,0	1/1:0,25:25:51.17:1733,51,0	0/0:29,0:29:81.27:0,81,4090	1/1:2,29:31:75.26:2646,75,0	0/0:22,0:22:66.21:0,66,3333	0/0:21,0:21:63.22:0,63,3366	1/1:2,29:31:72.25:2540,72,0	1/1:0,18:18:33.11:1164,33,0	1/1:2,19:21:45.15:1587,45,0	1/1:0,22:22:57.20:2011,57,0	0/0:35,0:35:99:0,102,5427	0/0:25,0:25:75.21:0,75,3915	0/0:26,0:26:72.23:0,72,3902	0/0:16,0:16:48.16:0,48,2411	0/0:33,0:33:99:0,99,5128	0/0:41,0:41:99:0,120,6226	1/1:0,32:32:81.14:2599,81,0	1/1:0,16:16:48.12:1607,48,0	1/1:1,23:24:29.76:1058,30,0	1/1:0,19:19:39.13:1376,39,0	0/0:26,0:26:75.25:0,75,3824	0/0:29,0:29:84.23:0,84,4073	0/0:9,0:9:27.09:0,27,1546
chr10	108897271	.	A	AT	2435.15	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-8.883;DP=507;FS=1.548;HRun=7;HaplotypeScore=48.7942;InbreedingCoeff=0.9851;MQ=79.02;MQ0=1;MQRankSum=0.565;QD=24.60;ReadPosRankSum=3.534;VQSLOD=3.8594;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.15:0,93,897	0/0:6,0:6:18.03:0,18,174	0/0:18,0:15:11.95:0,12,168	0/0:17,0:12:12.99:0,13,95	0/0:25,0:25:63.07:0,63,600	0/0:15,0:15:42.07:0,42,406	0/0:13,0:13:36.02:0,36,335	0/0:27,0:27:69.09:0,69,659	0/0:13,0:13:36.05:0,36,343	0/0:19,0:19:39.05:0,39,377	0/0:9,0:9:27.04:0,27,261	1/1:3,18:21:48.15:580,48,0	1/1:2,10:12:21.06:254,21,0	1/1:0,15:15:36.11:435,36,0	0/0:19,0:19:57.08:0,57,545	0/0:13,0:13:38.90:0,39,360	0/0:33,0:33:90.12:0,90,864	0/0:31,0:31:87.07:0,87,819	0/0:17,0:17:48.05:0,48,451	0/0:18,0:18:54.05:0,54,507	0/0:20,0:20:60.08:0,60,574	1/1:3,15:18:45.14:543,45,0	1/1:4,17:21:23.13:485,23,0	1/1:0,12:12:27.08:326,27,0	0/0:20,0:20:54.07:0,54,516	0/0:17,0:17:42.04:0,42,399	0/0:14,0:14:33.05:0,33,318	0/0:12,0:12:36.06:0,36,348
chr10	108898443	.	CTGAGTTCAAGGCCAGCCCGGTCTACAGAT	C	6738.02	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.041;DP=589;FS=6.072;HRun=0;HaplotypeScore=390.6018;InbreedingCoeff=0.9702;MQ=62.24;MQ0=3;MQRankSum=-7.376;QD=93.58;ReadPosRankSum=3.986;VQSLOD=3.2018;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,13304	0/0:3,0:3:9.03:0,9,453	0/0:24,0:11:21.07:0,21,1006	0/0:33,0:21:27.69:0,28,1926	1/1:3,12:15:11.55:636,12,0	1/1:1,8:9:21.07:1600,21,0	1/1:4,19:23:24.08:1809,24,0	0/0:22,0:22:42.13:0,42,2385	1/1:1,15:16:18.06:1371,18,0	0/0:16,0:16:42.14:0,42,3337	0/0:12,0:12:30.10:0,30,3645	0/0:30,0:30:87.27:0,87,9448	0/0:25,0:25:72.24:0,72,7852	0/0:24,0:24:66.21:0,66,6325	0/0:29,0:29:78.26:0,78,7237	0/0:16,0:16:48.16:0,48,5605	0/0:25,0:25:72.23:0,72,7994	0/0:29,0:29:78.21:0,78,6858	0/0:10,0:10:21.07:0,21,1961	0/0:17,0:17:51.17:0,51,5352	0/0:26,0:26:75.24:0,75,6420	0/0:22,0:22:57.19:0,57,5266	0/0:16,0:16:48.16:0,48,4907	0/0:31,0:31:83.76:0,84,8956	1/1:1,8:9:18.06:1321,18,0	0/0:18,0:18:48.13:0,48,5124	0/0:37,0:37:99:0,105,10483	0/0:8,0:8:21.07:0,21,2692
chr10	108900631	.	AAAG	A	2201.83	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=0.230;DP=571;FS=2.938;HRun=0;HaplotypeScore=151.4773;InbreedingCoeff=0.9347;MQ=59.77;MQ0=4;MQRankSum=-6.056;QD=25.90;ReadPosRankSum=-1.496;VQSLOD=3.5464;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,2062	0/0:16,0:16:42.08:0,42,760	0/0:17,0:7:13.83:0,14,172	0/0:29,0:20:46.70:0,47,720	1/1:11,9:18:47.68:513,48,0	1/1:11,6:17:39.01:506,39,0	1/1:4,18:21:2.43:421,2,0	0/0:17,0:15:41.66:0,42,766	1/1:6,7:13:36.04:490,36,0	0/0:34,0:32:90.29:0,90,1751	0/0:24,0:24:69.07:0,69,1267	0/0:26,0:26:66.17:0,66,1219	0/0:6,0:6:9.03:0,9,172	0/0:20,0:20:57.11:0,57,1082	0/0:16,0:16:39.13:0,39,730	0/0:19,0:19:54.16:0,54,1044	0/0:23,0:23:51.10:0,51,962	0/0:48,0:48:99:0,114,2004	0/0:18,0:17:38.73:0,39,654	0/0:20,0:20:54.12:0,54,1036	0/0:14,0:14:36.08:0,36,613	0/0:16,0:16:39.13:0,39,795	0/0:12,0:11:23.74:0,24,472	0/0:22,0:22:47.15:0,47,796	1/1:9,4:13:35.98:439,36,0	0/0:17,0:17:42.14:0,42,863	0/0:24,0:24:60.05:0,60,1139	0/0:8,0:8:21.04:0,21,360
chr10	108900667	.	C	CAAAA	5852.03	PASS	AB=0.969;AC=26;AF=0.464;AN=56;BaseQRankSum=14.056;DP=595;FS=3.660;HRun=3;HaplotypeScore=151.1583;InbreedingCoeff=-0.2908;MQ=64.19;MQ0=4;MQRankSum=-5.364;QD=12.95;ReadPosRankSum=10.675;VQSLOD=0.3184;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:4.54:562,5,0	0/0:12,0:12:36.10:0,36,593	0/0:25,0:19:41.24:0,41,603	0/0:27,0:24:19.51:0,20,480	0/1:18,1:18:42:263,0,42	0/1:16,4:20:54.85:381,0,55	0/1:20,2:21:99:310,0,141	0/1:29,0:27:99:128,0,260	0/1:9,1:10:11.91:255,0,12	0/0:29,0:29:87.24:0,87,1390	0/0:22,0:22:62.92:0,63,1056	0/1:27,0:27:16.34:346,0,16	1/1:10,0:10:5.92:69,6,0	0/1:21,0:21:18.82:463,0,19	0/1:18,0:18:0.94:194,0,1	0/0:27,0:27:81.13:0,81,1241	1/1:22,0:22:5.07:315,5,0	0/1:44,0:44:99:430,0,146	0/1:28,0:28:99:180,0,301	0/1:15,0:15:62.91:253,0,63	0/1:17,0:17:51.91:105,0,52	0/1:18,0:18:76.61:77,0,115	0/1:13,0:13:36.37:159,0,36	1/1:14,0:14:18.04:206,18,0	0/1:15,4:19:31.85:502,0,32	0/1:18,0:18:99:305,0,102	0/1:20,0:20:43.86:190,0,44	0/1:11,0:11:5.94:158,0,6
chr10	108900675	.	C	CAAAA	18125.57	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=10.159;DP=617;FS=0.000;HRun=3;HaplotypeScore=132.6583;InbreedingCoeff=0.9670;MQ=62.89;MQ0=4;MQRankSum=-5.578;QD=37.76;ReadPosRankSum=0.164;VQSLOD=2.1759;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,34:39:63.22:1629,63,0	0/0:14,0:14:39.09:0,39,617	0/0:22,0:17:31.62:0,32,568	0/0:22,0:20:35.01:0,35,551	1/1:7,0:19:33.03:645,33,0	1/1:9,0:22:36.12:763,36,0	1/1:17,0:20:54.10:1064,54,0	1/1:8,20:27:72.07:1127,72,0	1/1:4,0:15:24.08:496,24,0	0/0:29,0:29:87.15:0,87,1391	0/0:21,0:21:63.19:0,63,1071	1/1:2,25:27:39.61:1045,40,0	1/1:0,10:10:5.92:161,6,0	1/1:1,20:22:42.62:1129,43,0	1/1:1,18:19:21.07:566,21,0	0/0:29,0:29:81.11:0,81,1237	1/1:2,20:22:38.80:936,39,0	1/1:9,28:39:69.18:1667,69,0	1/1:3,24:28:84.06:1287,84,0	1/1:4,12:17:39.02:780,39,0	1/1:3,16:21:12.04:301,12,0	1/1:5,14:19:38.85:569,39,0	1/1:0,12:13:23.42:394,23,0	1/1:1,16:18:24.05:545,24,0	1/1:8,1:27:42.14:849,42,0	1/1:2,15:18:54.09:1108,54,0	1/1:2,21:23:26.77:662,27,0	1/1:1,11:12:15.05:404,15,0
chr10	108904226	.	CT	C	20007.32	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=4.165;DP=682;FS=3.842;HRun=2;HaplotypeScore=72.5676;InbreedingCoeff=0.9872;MQ=88.61;MQ0=0;MQRankSum=-9.063;QD=35.54;ReadPosRankSum=5.331;VQSLOD=5.2732;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,42:43:99:1597,123,0	0/0:7,0:7:21.07:0,21,314	0/0:33,0:33:96.26:0,96,1372	0/0:20,0:20:53.26:0,53,683	1/1:0,17:17:36.12:467,36,0	1/1:0,19:19:45.15:584,45,0	1/1:1,35:36:99:1325,102,0	1/1:0,29:29:84.26:1076,84,0	1/1:1,23:24:27.36:851,27,0	0/0:24,0:24:69.23:0,69,1019	0/0:11,0:11:33.10:0,33,471	1/1:1,27:28:78.25:1013,78,0	1/1:0,19:19:54.18:701,54,0	1/1:1,23:24:69.22:896,69,0	1/1:0,25:25:69.22:896,69,0	0/0:24,0:24:72.24:0,72,1079	1/1:0,31:31:84.27:1091,84,0	1/1:0,34:34:96.31:1247,96,0	1/1:0,20:20:60.18:762,60,0	1/1:0,22:22:60.20:779,60,0	1/1:0,42:42:99:1636,126,0	1/1:0,21:21:54.18:701,54,0	1/1:1,19:20:42.14:544,42,0	1/1:0,36:36:96.31:1244,96,0	1/1:0,14:14:39.13:506,39,0	1/1:1,30:31:48.27:1078,48,0	1/1:1,24:25:69.22:896,69,0	1/1:0,3:3:9.03:117,9,0
chr10	108906995	.	T	TC	15552.05	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-11.119;DP=527;FS=13.971;HRun=3;HaplotypeScore=55.7612;InbreedingCoeff=0.9631;MQ=87.97;MQ0=0;MQRankSum=-6.090;QD=35.83;ReadPosRankSum=4.194;VQSLOD=4.0707;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:93.31:1302,93,0	0/0:10,0:10:27.08:0,27,324	0/0:14,0:14:36.06:0,36,400	0/0:22,0:22:54.16:0,54,637	1/1:1,6:7:15.05:210,15,0	1/1:0,11:11:30.10:420,30,0	1/1:1,19:20:57.19:798,57,0	1/1:2,22:24:63.20:865,63,0	1/1:3,17:20:48.16:672,48,0	0/0:22,0:22:60.18:0,60,707	0/0:12,0:12:30.09:0,30,359	1/1:1,16:17:48.16:672,48,0	1/1:2,11:13:39.11:513,39,0	1/1:0,20:20:51:714,51,0	1/1:0,15:14:39.13:546,39,0	0/0:13,0:13:36.11:0,36,432	1/1:1,30:31:87.29:1218,87,0	1/1:1,31:32:93.31:1294,93,0	1/1:1,16:17:48.14:654,48,0	1/1:1,16:17:45.15:630,45,0	1/1:2,33:35:84.28:1176,84,0	1/1:3,11:14:4.53:352,5,0	1/1:2,13:15:36.12:504,36,0	1/1:2,25:27:66.22:924,66,0	1/1:1,17:18:45.15:630,45,0	1/1:2,17:19:12.15:593,12,0	1/1:2,16:18:36.12:504,36,0	1/1:1,9:11:27.08:361,27,0
chr10	108907600	.	A	AG	2809.05	PASS	AB=0.908;AC=43;AF=0.768;AN=56;BaseQRankSum=3.236;DP=402;FS=5.474;HRun=9;HaplotypeScore=66.9147;InbreedingCoeff=0.5706;MQ=76.94;MQ0=11;MQRankSum=-1.185;QD=9.72;ReadPosRankSum=5.154;VQSLOD=2.0015;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:40.49:217,40,0	0/1:3,1:4:17.40:19,0,17	0/0:49,0:22:40.09:0,40,278	0/0:40,0:16:15.04:0,15,121	1/1:11,0:11:29.15:175,29,0	1/1:14,0:14:23.36:142,23,0	0/1:12,0:12:2.76:84,0,3	1/1:20,0:20:40.61:221,41,0	1/1:10,0:10:11.91:63,12,0	0/1:14,1:14:1.72:2,0,196	0/0:12,0:12:8.75:0,9,149	1/1:10,0:10:17.55:113,18,0	1/1:8,1:9:17.62:137,18,0	1/1:10,1:10:23.22:160,23,0	1/1:6,1:7:17.40:113,17,0	0/0:12,0:12:32.86:0,33,270	1/1:26,0:26:49.23:265,49,0	1/1:14,0:14:26.14:143,26,0	1/1:8,0:10:26.02:139,26,0	1/1:11,0:11:26.01:139,26,0	1/1:8,0:8:17.39:93,17,0	1/1:18,0:18:39.66:198,40,0	0/1:6,2:8:5.71:96,0,6	0/1:16,0:16:3.67:118,0,4	1/1:7,0:7:8.58:44,9,0	1/1:6,0:6:14.51:78,15,0	1/1:10,1:11:29.06:161,29,0	1/1:8,0:7:11.55:61,12,0
chr10	108907609	.	G	GGT	7098.54	PASS	AB=0.550;AC=41;AF=0.732;AN=56;BaseQRankSum=-5.585;DP=421;FS=8.496;HRun=0;HaplotypeScore=62.2442;InbreedingCoeff=0.7325;MQ=86.12;MQ0=6;MQRankSum=-3.351;QD=25.08;ReadPosRankSum=5.099;VQSLOD=5.2695;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:23:41.97:721,42,0	0/0:2,0:2:5.38:0,5,51	0/0:54,0:28:57.66:0,58,638	0/0:43,0:19:38.92:0,39,367	1/1:0,1:13:35.03:261,35,0	1/1:0,1:13:23.10:158,23,0	0/1:1,0:15:3.21:56,0,3	1/1:0,23:23:68.99:986,69,0	1/1:1,0:10:9.15:66,9,0	0/0:12,0:12:34.33:0,34,445	0/0:14,0:14:36.06:0,36,434	1/1:0,0:7:17.22:88,17,0	1/1:2,0:10:16.32:75,16,0	1/1:5,0:10:25.48:133,25,0	1/1:3,0:7:17.45:145,17,0	0/0:13,0:13:39.10:0,39,516	1/1:2,22:24:51.17:936,51,0	1/1:2,12:14:27.09:499,27,0	1/1:3,10:14:38.98:506,39,0	1/1:1,12:13:35.90:545,36,0	1/1:2,10:14:18.06:325,18,0	1/1:0,1:19:37.41:236,37,0	0/1:3,0:9:7.83:104,0,8	0/1:2,0:16:4.07:88,0,4	1/1:0,0:4:8.33:44,8,0	1/1:0,9:9:27.03:376,27,0	1/1:1,10:11:30.10:548,30,0	1/1:0,3:4:12.04:204,12,0
chr10	108908035	.	T	TCACACACACACCC	3821.02	PASS	AB=0.926;AC=27;AF=0.482;AN=56;BaseQRankSum=6.897;DP=478;FS=2.806;HRun=0;HaplotypeScore=173.3626;InbreedingCoeff=-0.0872;MQ=50.55;MQ0=12;MQRankSum=-5.584;QD=10.92;ReadPosRankSum=-2.968;VQSLOD=2.2106;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:13.13:0,13,204	0/0:8,0:8:18.06:0,18,480	0/0:21,0:5:15.01:0,15,228	0/0:38,0:19:24.08:0,24,388	1/1:3,0:19:3.44:21,3,0	1/1:8,0:20:12.15:336,12,0	1/1:11,0:27:10.59:284,11,0	0/1:24,0:21:82.38:82,0,395	1/1:2,1:6:3.48:158,3,0	0/0:9,0:9:18.06:0,18,439	0/0:12,0:13:26.91:0,27,821	0/1:18,0:17:3.77:104,0,4	0/1:9,0:9:12.38:309,0,12	0/1:9,0:9:43.28:81,0,43	0/1:13,0:13:14.59:83,0,15	0/0:6,0:8:18.06:0,18,460	0/1:8,0:23:57.52:263,0,58	0/1:15,0:15:99:445,0,126	0/1:14,0:24:99:474,0,240	0/1:16,0:16:35.52:36,0,46	0/1:35,0:34:67.20:67,0,274	0/1:12,0:11:0.91:1,0,12	1/1:15,0:15:0.29:82,0,0	0/1:14,0:14:1.81:64,0,2	1/1:4,0:15:13.87:477,14,0	0/1:17,0:17:99:199,0,269	0/1:10,0:9:99:124,0,111	0/1:1,0:3:44.39:131,0,44
chr10	108908666	.	TG	T	10150.52	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-3.674;DP=649;FS=1.110;HRun=10;HaplotypeScore=72.4879;InbreedingCoeff=0.8494;MQ=81.30;MQ0=0;MQRankSum=-3.781;QD=18.49;ReadPosRankSum=3.094;VQSLOD=5.6675;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,30:41:61.41:680,61,0	0/0:10,0:10:15.04:0,15,166	0/0:20,0:19:5.22:0,5,208	0/0:24,1:23:4.05:0,4,262	1/1:5,15:20:41.96:364,42,0	1/1:7,18:25:59.96:521,60,0	1/1:8,30:38:56.78:722,57,0	1/1:3,8:11:20.94:177,21,0	1/1:1,21:22:56.99:495,57,0	0/0:19,0:19:24.06:0,24,265	0/1:13,0:13:4.43:4,0,142	1/1:6,22:28:59.97:521,60,0	1/1:2,22:24:62.99:547,63,0	1/1:6,19:25:59.98:519,60,0	1/1:6,18:24:20.80:410,21,0	0/0:14,0:25:40.82:0,41,314	1/1:10,21:31:38.79:563,39,0	1/1:3,20:23:62.99:547,63,0	1/1:9,13:23:44.02:370,44,0	1/1:2,19:21:53.98:469,54,0	1/1:13,31:47:85.02:715,85,0	1/1:4,21:25:29.80:488,30,0	1/1:3,13:17:35.03:292,35,0	1/1:4,23:27:35.83:540,36,0	1/1:7,9:17:26:214,26,0	1/1:4,20:25:59.01:498,59,0	1/1:2,11:13:32.99:287,33,0	1/1:0,9:9:24:208,24,0
chr10	108909639	.	TCA	T	4861.32	PASS	AB=0.905;AC=25;AF=0.446;AN=56;BaseQRankSum=11.608;DP=855;FS=11.190;HRun=0;HaplotypeScore=107.0904;InbreedingCoeff=0.6391;MQ=67.21;MQ0=15;MQRankSum=3.026;QD=11.05;ReadPosRankSum=2.399;VQSLOD=3.8307;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,33:52:65.63:739,66,0	0/1:13,1:17:55.81:56,0,343	0/0:47,0:20:8.76:0,9,95	0/0:41,0:19:11.94:0,12,97	0/0:24,0:24:48.16:0,48,733	0/0:23,0:24:54.16:0,54,782	0/0:31,1:32:34.55:0,35,933	1/1:25,10:35:26.06:280,26,0	0/0:28,0:28:54.17:0,54,810	0/0:31,1:31:28.48:0,28,862	0/1:20,3:23:33.21:33,0,401	0/1:26,4:30:66.40:66,0,831	0/0:33,1:33:34.58:0,35,992	0/0:21,1:22:10.51:0,11,613	0/1:35,6:40:28.71:29,0,949	0/0:25,1:26:22.53:0,23,777	1/1:8,26:35:69.04:776,69,0	1/1:6,20:28:33.47:527,33,0	1/1:20,7:26:15:159,15,0	1/1:10,11:22:10.22:194,10,0	1/1:18,30:49:75.05:846,75,0	0/0:37,2:39:49.62:0,50,1184	0/0:23,0:23:57.19:0,57,859	0/0:41,2:43:55.65:0,56,1277	0/1:15,0:16:1.41:1,0,426	1/1:10,19:28:34.24:539,34,0	1/1:7,9:17:17.89:187,18,0	1/1:3,13:17:38.95:430,39,0
chr10	108911194	.	GA	G	9425.38	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=1.696;DP=575;FS=13.760;HRun=10;HaplotypeScore=67.8586;InbreedingCoeff=0.9383;MQ=78.98;MQ0=1;MQRankSum=-3.544;QD=20.72;ReadPosRankSum=4.106;VQSLOD=4.7270;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,32:39:32.61:741,33,0	0/0:7,0:7:18.05:0,18,199	0/0:36,0:28:15.56:0,16,322	0/0:28,0:23:1.26:0,1,319	1/1:1,25:26:74.90:637,75,0	1/1:2,9:11:23.99:208,24,0	1/1:2,11:13:20.70:248,21,0	1/1:7,30:37:86.92:742,87,0	1/1:3,11:14:26.98:234,27,0	0/0:22,0:22:60.14:0,60,648	0/0:17,0:17:42.10:0,42,457	1/1:5,14:19:38.72:338,39,0	1/1:2,5:7:14.99:130,15,0	1/1:5,9:14:23.99:208,24,0	1/1:2,21:23:53.98:468,54,0	0/0:9,0:9:18.05:0,18,199	1/1:1,34:35:92.98:807,93,0	1/1:2,26:28:71.99:625,72,0	1/1:2,18:21:55.39:457,55,0	1/1:3,15:18:41.94:357,42,0	1/1:1,14:15:38.99:338,39,0	1/1:4,21:25:59.96:520,60,0	1/1:1,20:21:59.99:521,60,0	1/1:2,18:20:47.99:416,48,0	1/1:0,18:18:44.99:391,45,0	1/1:3,18:21:53.97:464,54,0	1/1:1,19:20:50.99:443,51,0	1/1:3,7:10:14.99:130,15,0
chr10	108911541	.	G	GAA	8361.56	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=0.454;DP=686;FS=4.686;HRun=9;HaplotypeScore=93.0342;InbreedingCoeff=0.9978;MQ=76.16;MQ0=5;MQRankSum=-2.300;QD=18.18;ReadPosRankSum=1.223;VQSLOD=3.5834;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,40:44:80.08:1191,80,0	0/0:12,0:13:27:0,27,334	0/0:24,0:21:18.03:0,18,215	0/0:16,0:16:28.09:0,28,219	0/0:27,0:27:59.95:0,60,682	0/0:19,0:19:41.71:0,42,499	0/0:25,0:25:63.11:0,63,654	1/1:6,19:25:57.08:736,57,0	0/0:27,0:28:68.88:0,69,713	0/0:24,0:24:66.13:0,66,700	0/0:13,0:13:33.08:0,33,350	1/1:3,1:35:43.62:192,44,0	1/1:3,1:15:28.35:168,28,0	1/1:4,0:23:34.66:118,35,0	1/1:1,0:20:27.45:95,27,0	0/0:15,0:15:26.64:0,27,334	1/1:1,29:30:66.22:999,66,0	1/1:6,26:34:60.19:886,60,0	1/1:2,14:17:44.08:533,44,0	1/1:1,16:17:42.14:628,42,0	1/1:8,22:31:36.08:511,36,0	1/1:3,0:30:53.38:189,53,0	1/1:3,0:22:24.22:83,24,0	1/1:4,0:49:54.71:244,55,0	0/0:22,0:22:51.09:0,51,535	1/1:4,17:22:48.13:694,48,0	1/1:4,13:20:37.93:506,38,0	1/1:1,20:21:39.13:590,39,0
chr10	108912680	.	TA	T	1311.54	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=8.355;DP=383;FS=4.187;HRun=9;HaplotypeScore=47.0052;InbreedingCoeff=0.8550;MQ=80.13;MQ0=2;MQRankSum=1.623;QD=20.49;ReadPosRankSum=2.174;VQSLOD=4.0814;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.08:0,60,653	./.	0/0:32,0:15:31.61:0,32,252	0/0:24,0:17:3.22:0,3,150	1/1:0,15:15:45.02:410,45,0	1/1:1,20:21:51.03:467,51,0	1/1:2,7:9:18.01:165,18,0	0/0:27,0:27:72.15:0,72,796	1/1:0,9:9:27.01:247,27,0	0/0:18,0:18:54.16:0,54,623	0/0:7,0:7:15.04:0,15,173	0/0:4,0:4:9.03:0,9,104	0/0:6,0:6:18.05:0,18,208	0/0:11,0:11:30.09:0,30,346	0/0:5,0:5:15.04:0,15,173	0/0:8,0:8:24.07:0,24,277	0/0:30,0:29:87.26:0,87,1003	0/0:33,0:33:84.16:0,84,931	0/0:21,0:20:48.14:0,48,552	0/0:10,0:10:24.07:0,24,277	0/0:2,0:2:6.01:0,6,59	0/0:4,0:4:12.02:0,12,128	0/0:6,0:6:15.04:0,15,173	0/0:2,0:2:3.01:0,3,35	1/1:2,8:10:21.01:192,21,0	0/0:22,0:22:57.16:0,57,650	0/0:13,1:14:8.72:0,9,354	0/0:8,0:8:24.07:0,24,277
chr10	108913526	.	TG	T	20397.39	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=3.558;DP=769;FS=2.367;HRun=3;HaplotypeScore=80.8269;InbreedingCoeff=0.9973;MQ=95.23;MQ0=0;MQRankSum=-7.599;QD=33.27;ReadPosRankSum=6.182;VQSLOD=4.9406;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:39:99:1298,105,0	0/0:12,0:12:36.11:0,36,503	0/0:40,0:40:99:0,102,1533	0/0:34,0:34:93.17:0,93,1255	1/1:0,22:22:63.19:761,63,0	1/1:0,17:17:48.15:595,48,0	1/1:0,25:25:69.22:856,69,0	1/1:1,23:24:69.22:855,69,0	1/1:0,22:22:63.20:781,63,0	0/0:28,0:28:81.26:0,81,1149	0/0:22,0:22:63.21:0,63,905	1/1:0,26:26:60.19:744,60,0	1/1:1,40:41:99:1376,111,0	1/1:1,26:27:60.19:744,60,0	1/1:0,37:37:99:1339,108,0	0/0:20,0:20:60.20:0,60,863	1/1:0,35:35:99:1227,99,0	1/1:0,22:22:54.17:669,54,0	1/1:2,24:26:72.23:893,72,0	1/1:0,35:35:99:1227,99,0	1/1:1,39:40:99:1302,105,0	1/1:1,29:30:78.24:967,78,0	1/1:0,21:21:51.16:632,51,0	1/1:0,24:24:66.21:818,66,0	1/1:0,18:18:48.15:595,48,0	1/1:3,32:35:15.85:1083,16,0	1/1:1,33:34:93.29:1151,93,0	1/1:0,13:13:39.12:484,39,0
chr10	108914222	.	AGTGTGCACCTGCAGTGAGTCCCAGTGTGCACCTGCAGTGAGCACCT	A	1708.50	PASS	AC=30;AF=0.714;AN=42;BaseQRankSum=2.156;DP=173;FS=0.910;HRun=0;HaplotypeScore=176.6710;InbreedingCoeff=0.5853;MQ=48.80;MQ0=21;MQRankSum=-6.575;QD=32.24;ReadPosRankSum=-1.233;VQSLOD=1.9584;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:6.02:143,6,0	0/0:12,0:11:27.09:0,27,1508	0/0:13,0:4:12.04:0,12,342	0/0:23,0:9:25.06:0,25,437	1/1:2,0:2:3.01:55,3,0	1/1:1,0:1:3.01:108,3,0	./.	1/1:4,0:3:2.10:23,2,0	1/1:1,0:1:3.01:55,3,0	0/0:27,0:24:60.21:0,60,4046	0/0:14,0:14:33.10:0,33,1592	1/1:1,0:1:3.01:36,3,0	./.	./.	1/1:1,0:1:3.01:124,3,0	0/0:23,0:22:48.15:0,48,2912	1/1:4,0:4:12.04:309,12,0	1/1:1,0:1:3.01:146,3,0	./.	1/1:1,0:1:3.01:36,3,0	1/1:10,0:10:18.06:504,18,0	1/1:1,0:1:3.01:35,3,0	1/1:0,14:14:0.72:2,1,0	1/1:7,0:6:9.03:207,9,0	./.	./.	./.	1/1:2,0:1:3.01:76,3,0
chr10	108915128	.	CT	C	7839.36	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.787;DP=915;FS=3.753;HRun=3;HaplotypeScore=94.2097;InbreedingCoeff=0.9997;MQ=73.58;MQ0=0;MQRankSum=-0.711;QD=30.04;ReadPosRankSum=4.509;VQSLOD=4.4803;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1620	0/0:12,0:12:36.12:0,36,513	0/0:29,0:28:84.22:0,84,1119	0/0:31,0:30:84.15:0,84,1109	0/0:30,0:30:90.29:0,90,1277	0/0:21,0:21:63.21:0,63,906	0/0:38,0:38:99:0,108,1552	0/0:33,0:33:93.30:0,93,1301	0/0:40,0:40:99:0,120,1693	0/0:40,0:40:99:0,120,1696	0/0:21,0:21:63.21:0,63,905	1/1:0,36:36:81.23:1004,81,0	1/1:0,30:30:84.26:1037,84,0	1/1:1,37:38:90.28:1115,90,0	1/1:2,37:39:87.27:1078,87,0	0/0:36,0:36:99:0,102,1450	0/0:48,0:48:99:0,132,1879	0/0:27,0:27:72.24:0,72,1037	0/0:20,0:20:57.17:0,57,800	0/0:19,0:19:54.18:0,54,777	0/0:82,0:82:99:0,238,3312	1/1:1,27:28:72.23:892,72,0	1/1:2,13:15:33.10:407,33,0	1/1:2,73:75:99:2305,187,0	0/0:18,0:18:48.15:0,48,674	0/0:34,0:34:90.29:0,90,1262	0/0:27,0:27:81.25:0,81,1128	0/0:9,0:9:27.09:0,27,389
chr10	108916202	.	TG	T	4495.03	PASS	AB=0.957;AC=44;AF=0.786;AN=56;BaseQRankSum=2.595;DP=669;FS=0.410;HRun=1;HaplotypeScore=99.2755;InbreedingCoeff=0.7429;MQ=44.47;MQ0=39;MQRankSum=1.247;QD=8.00;ReadPosRankSum=-3.911;VQSLOD=0.5753;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:36,5:38:41:441,41,0	0/0:12,0:12:32.94:0,33,357	0/0:28,1:5:7.91:0,8,109	0/1:48,3:15:9.17:9,0,83	1/1:20,2:21:29.76:219,30,0	1/1:17,2:19:14.81:90,15,0	1/1:21,0:19:17.40:102,17,0	1/1:24,2:24:23.16:331,23,0	1/1:16,0:13:25.46:146,25,0	0/0:25,0:25:62.88:0,63,685	0/0:21,0:19:49.67:0,50,536	1/1:10,0:9:9.49:94,9,0	1/1:16,1:17:26.15:221,26,0	1/1:22,0:22:23.82:147,24,0	1/1:18,2:20:19.92:166,20,0	0/0:20,0:20:42.91:0,43,508	1/1:27,4:29:26.92:300,27,0	0/1:31,1:25:45.63:225,0,46	1/1:29,2:26:24.51:209,25,0	1/1:22,1:22:14.30:155,14,0	1/1:14,1:15:24.30:160,24,0	1/1:20,1:20:11.99:160,12,0	1/1:17,0:17:24.93:236,25,0	1/1:42,0:40:9.64:133,10,0	1/1:19,0:17:35.73:212,36,0	1/1:24,5:26:35.80:415,36,0	1/1:25,1:25:23.48:242,23,0	1/1:11,0:11:11.47:85,11,0
chr10	108916597	.	CAA	C	4872.57	PASS	AB=0.853;AC=44;AF=0.786;AN=56;BaseQRankSum=0.516;DP=564;FS=11.587;HRun=16;HaplotypeScore=79.5103;InbreedingCoeff=0.6848;MQ=60.69;MQ0=4;MQRankSum=0.368;QD=10.07;ReadPosRankSum=3.616;VQSLOD=2.5053;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,13:32:47.12:373,47,0	0/0:2,0:5:12.60:0,13,101	0/0:26,0:9:9.01:0,9,91	0/1:28,0:17:2.07:2,0,106	1/1:7,8:17:18.48:145,18,0	1/1:5,10:18:25.67:224,26,0	1/1:10,16:27:50.50:409,50,0	1/1:8,15:27:45.51:349,46,0	1/1:10,5:18:24.78:177,25,0	0/0:13,0:16:28.80:0,29,306	0/0:15,0:16:20.55:0,21,244	1/1:9,10:19:29.54:237,30,0	1/1:8,5:13:20.69:166,21,0	1/1:12,4:19:6.25:146,6,0	1/1:6,9:16:20.36:155,20,0	0/0:15,1:17:0.33:0,0,414	1/1:10,15:31:34.51:342,35,0	1/1:9,10:21:4.61:216,5,0	1/1:15,3:18:11.61:99,12,0	1/1:5,8:14:20.62:161,21,0	1/1:8,16:27:20.35:287,20,0	1/1:8,13:22:14.78:241,15,0	1/1:11,6:18:2.59:63,3,0	1/1:7,11:19:35.40:287,35,0	1/1:6,8:15:17.62:137,18,0	0/1:14,7:24:6.15:177,0,6	1/1:9,14:25:23.17:317,23,0	1/1:5,5:11:20.57:160,21,0
chr10	108917557	.	AC	A	14863.48	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=11.429;DP=669;FS=6.643;HRun=2;HaplotypeScore=68.7417;InbreedingCoeff=1.0000;MQ=92.70;MQ0=0;MQRankSum=-4.201;QD=35.39;ReadPosRankSum=3.521;VQSLOD=5.4358;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:96.31:1245,96,0	0/0:19,0:19:57.06:0,57,752	0/0:32,0:32:69.62:0,70,1193	0/0:24,0:24:58.35:0,58,835	0/0:19,0:19:57.18:0,57,834	0/0:21,0:21:63.20:0,63,922	0/0:26,0:26:75.18:0,75,1035	1/1:0,24:24:72.22:909,72,0	0/0:23,0:23:66.20:0,66,948	0/0:17,0:17:48.15:0,48,701	0/0:18,0:18:48.16:0,48,716	1/1:0,27:27:72.23:934,72,0	1/1:0,25:25:69.22:893,69,0	1/1:0,20:20:57.14:721,57,0	1/1:0,31:31:87.28:1128,87,0	0/0:15,0:15:45.14:0,45,653	1/1:0,23:23:69.22:895,69,0	1/1:0,19:19:57.19:740,57,0	1/1:1,21:22:63.18:779,63,0	1/1:0,23:23:57.19:740,57,0	1/1:3,36:39:90.29:1168,90,0	1/1:1,23:24:66.21:856,66,0	1/1:0,18:18:51.17:662,51,0	1/1:0,29:29:78.20:991,78,0	0/0:35,0:35:99:0,102,1526	1/1:1,25:26:74.32:958,74,0	1/1:1,25:26:63.12:817,63,0	1/1:0,11:11:33.11:428,33,0
chr10	108918088	.	AACACACACACAC	A	6046.69	PASS	AB=0.781;AC=16;AF=0.286;AN=56;BaseQRankSum=1.988;DP=716;FS=94.456;HRun=0;HaplotypeScore=258.9351;InbreedingCoeff=-0.3897;MQ=52.87;MQ0=2;MQRankSum=-5.012;QD=15.35;ReadPosRankSum=3.498;VQSLOD=-0.1133;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,12:42:99:194,0,116	0/0:8,0:9:21.07:0,21,1056	0/0:36,0:26:12.04:0,12,435	0/0:30,0:21:15.51:0,16,389	0/0:18,0:24:33.19:0,33,1138	0/0:18,0:31:18.70:0,19,918	0/0:21,0:37:51.06:0,51,1520	0/0:29,0:26:2.69:0,3,79	0/0:17,0:22:30.10:0,30,1138	0/0:30,0:31:54.15:0,54,2134	0/0:18,0:18:15.05:0,15,709	0/1:21,4:25:99:441,0,219	0/1:22,3:25:99:292,0,266	0/1:11,7:18:99:396,0,236	0/1:23,13:36:99:186,0,451	0/0:22,0:21:45.13:0,45,2126	0/1:17,6:22:99:606,0,109	0/1:17,0:17:34.66:35,0,352	0/1:10,8:17:52.15:563,0,52	0/1:15,8:23:99:474,0,240	0/1:22,0:20:85.52:86,0,130	0/1:16,13:29:99:590,0,349	0/1:12,9:21:64.80:402,0,65	0/1:22,7:30:99:231,0,271	0/0:28,0:31:45.14:0,45,1679	0/1:17,13:30:99:650,0,188	0/1:11,9:20:99:602,0,112	0/1:8,5:13:5.88:301,0,6
chr10	108918169	.	G	GCACACACACACA	9473.61	PASS	AB=0.891;AC=41;AF=0.820;AN=50;BaseQRankSum=1.578;DP=498;FS=20.538;HRun=0;HaplotypeScore=206.6642;InbreedingCoeff=0.4162;MQ=48.55;MQ0=6;MQRankSum=-6.221;QD=23.98;ReadPosRankSum=-0.687;VQSLOD=2.6462;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:22:6.91:167,7,0	0/1:8,0:8:4.92:5,0,421	./.	./.	1/1:11,0:10:5.99:49,6,0	1/1:25,0:24:9.01:185,9,0	1/1:21,0:21:3.01:77,3,0	1/1:23,0:20:3.01:72,3,0	1/1:27,2:27:6.03:971,6,0	0/0:26,0:26:24.67:0,25,896	0/0:8,0:8:18.05:0,18,518	1/1:20,2:19:26.97:1238,27,0	1/1:19,10:33:36.12:1740,36,0	1/1:9,2:12:15.05:667,15,0	1/1:16,6:23:30.06:1512,30,0	0/0:16,0:16:33.11:0,33,1145	1/1:10,0:11:10.59:234,11,0	1/1:8,0:8:2.98:21,3,0	0/1:10,0:11:34.48:109,0,34	1/1:11,0:13:15.03:321,15,0	0/1:17,0:22:8.25:8,0,51	./.	1/1:14,1:16:9.03:466,9,0	1/1:12,0:11:3.48:45,3,0	1/1:15,0:16:2.94:117,3,0	1/1:16,0:19:32.80:711,33,0	1/1:17,0:22:24.08:573,24,0	1/1:3,0:4:9.03:186,9,0
chr10	108918238	.	A	AACACACACAC	5998.28	PASS	AB=0.824;AC=32;AF=0.571;AN=56;BaseQRankSum=-4.999;DP=456;FS=9.067;HRun=0;HaplotypeScore=153.1052;InbreedingCoeff=0.0316;MQ=62.85;MQ0=9;MQRankSum=-6.975;QD=19.67;ReadPosRankSum=-3.099;VQSLOD=2.7241;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,1:11:77:144,0,77	0/0:14,0:14:27.09:0,27,802	0/0:29,0:13:12.03:0,12,242	0/0:33,0:21:9.03:0,9,198	1/1:5,0:7:3.01:91,3,0	1/1:11,1:12:5.69:240,6,0	1/1:10,0:16:3.01:91,3,0	1/1:27,0:20:12:130,12,0	1/1:10,3:11:9.03:451,9,0	0/0:21,0:21:39.13:0,39,1150	0/0:26,0:27:40.96:0,41,1407	0/1:16,7:31:49.47:1095,0,49	1/1:7,1:7:3.01:150,3,0	0/1:8,2:9:67.52:292,0,68	1/1:12,4:18:18.06:783,18,0	0/0:26,0:26:48.16:0,48,1442	0/1:11,2:12:99:283,0,229	0/1:4,0:7:25.98:26,0,204	0/1:13,0:12:0:0,0,0	0/1:7,1:8:70.54:144,0,71	1/1:13,1:14:8.95:322,9,0	0/1:12,5:17:99:285,0,186	0/1:11,2:13:69.23:210,0,69	0/1:8,2:10:16.46:288,0,16	1/1:7,1:8:3.01:150,3,0	0/1:21,1:19:72.94:320,0,73	1/1:10,1:11:3.01:151,3,0	0/1:6,2:9:6.09:351,0,6
chr10	108918306	.	A	AAC	1456.47	PASS	AB=0.882;AC=12;AF=0.214;AN=56;BaseQRankSum=-2.068;DP=666;FS=1.432;HRun=0;HaplotypeScore=149.0947;InbreedingCoeff=0.1630;MQ=55.21;MQ0=11;MQRankSum=1.079;QD=6.36;ReadPosRankSum=-2.216;VQSLOD=3.2631;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:29.88:0,30,318	0/1:14,0:17:22.70:23,0,142	0/0:28,0:13:6.01:0,6,64	0/0:31,0:15:3.01:0,3,31	1/1:9,13:25:20.89:289,21,0	0/1:10,18:27:6.42:337,0,6	1/1:25,5:30:27.04:341,27,0	0/0:29,0:24:8.97:0,9,81	0/1:14,4:17:4.73:167,0,5	0/0:26,0:26:30.04:0,30,335	0/0:23,0:23:8.16:0,8,293	0/1:28,1:27:47.86:59,0,48	0/0:16,0:17:20.87:0,21,198	0/1:11,0:12:23.10:23,0,145	0/0:18,0:18:30.05:0,30,330	0/0:12,0:15:29.58:0,30,276	0/0:26,0:26:43.03:0,43,460	0/0:19,0:19:18.02:0,18,192	0/0:5,0:7:14.84:0,15,148	0/1:16,0:16:6.96:7,0,88	0/0:38,0:37:44.89:0,45,466	0/1:26,0:27:26.04:26,0,144	0/0:26,0:27:3.84:0,4,225	0/0:21,0:22:32.75:0,33,322	0/1:13,13:27:64.38:343,0,64	0/0:27,0:27:37.99:0,38,342	0/0:20,0:22:41.68:0,42,403	0/0:22,0:23:38.67:0,39,394
chr10	108921167	.	T	TGCC	13085.10	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=11.452;DP=393;FS=5.214;HRun=0;HaplotypeScore=218.5608;InbreedingCoeff=0.8907;MQ=74.87;MQ0=0;MQRankSum=-12.212;QD=41.02;ReadPosRankSum=4.197;VQSLOD=5.3908;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,13:18:50.67:720,51,0	0/0:8,0:8:24.08:0,24,423	0/0:13,0:13:11.35:0,11,509	0/0:19,0:19:51.59:0,52,862	1/1:6,4:10:6.82:81,7,0	1/1:2,8:10:30.09:513,30,0	1/1:9,20:29:81.21:1385,81,0	1/1:12,6:18:45.10:644,45,0	1/1:2,12:14:17.13:630,17,0	0/0:14,0:14:39.13:0,39,685	0/0:7,0:7:15.05:0,15,264	1/1:8,16:24:72.24:1256,72,0	1/1:4,13:17:51.17:910,51,0	1/1:9,11:20:36.17:923,36,0	1/1:5,9:14:18.47:552,18,0	0/0:13,0:13:39.12:0,39,660	1/1:7,11:18:51.17:880,51,0	1/1:7,7:14:21.56:629,22,0	1/1:4,4:8:24.08:402,24,0	1/1:3,4:7:17.58:196,18,0	1/1:5,9:14:5.10:171,5,0	1/1:7,6:13:14.43:392,14,0	1/1:3,5:8:18.83:232,19,0	1/1:6,13:19:8.47:689,8,0	1/1:3,7:10:23.40:336,23,0	1/1:9,10:19:51.17:868,51,0	1/1:7,7:14:35.21:621,35,0	1/1:0,1:1:3.01:57,3,0
chr10	108921169	.	T	TGGGAAAAC	23357.62	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=11.069;DP=306;FS=1.697;HRun=0;HaplotypeScore=134.3673;InbreedingCoeff=0.9403;MQ=83.76;MQ0=0;MQRankSum=-11.752;QD=102.45;ReadPosRankSum=3.864;VQSLOD=6.0993;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:39.12:1483,39,0	0/0:8,0:8:24.08:0,24,708	0/0:13,0:13:22.28:0,22,880	0/0:20,0:20:54.04:0,54,1396	1/1:2,4:6:18.05:489,18,0	1/1:2,8:10:27.08:981,27,0	1/1:1,20:21:60.21:2336,60,0	1/1:2,6:8:21.07:728,21,0	1/1:2,12:14:39.13:1499,39,0	0/0:15,0:15:42.13:0,42,1164	0/0:7,0:7:15.05:0,15,451	1/1:1,16:17:51.18:2002,51,0	1/1:1,13:14:42.14:1576,42,0	1/1:2,11:13:39.13:1423,39,0	1/1:1,8:10:30.10:1111,30,0	0/0:15,0:15:39.06:0,39,1162	1/1:2,11:13:39.11:1291,39,0	1/1:3,7:10:24.08:890,24,0	1/1:1,4:5:11.87:470,12,0	1/1:0,4:4:12.04:458,12,0	1/1:4,9:13:32.99:839,33,0	1/1:3,6:9:23.97:886,24,0	1/1:0,4:5:15.05:558,15,0	1/1:1,12:14:39.13:1404,39,0	1/1:0,7:7:18.06:699,18,0	1/1:2,10:12:30.10:1188,30,0	1/1:1,7:8:24.08:924,24,0	1/1:0,1:1:3.01:122,3,0
chr10	108921822	.	C	CCA	5218.57	PASS	AB=0.876;AC=21;AF=0.375;AN=56;BaseQRankSum=-5.052;DP=673;FS=1.692;HRun=0;HaplotypeScore=103.5360;InbreedingCoeff=-0.0477;MQ=63.71;MQ0=7;MQRankSum=1.300;QD=12.11;ReadPosRankSum=0.565;VQSLOD=4.7025;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:39:99:303,0,136	0/0:9,0:9:15.04:0,15,176	0/0:32,0:18:11.96:0,12,115	0/0:26,0:22:23.37:0,23,201	0/0:9,0:9:18:0,18,185	0/0:20,0:20:42.05:0,42,445	0/0:39,0:40:92.51:0,93,923	0/1:38,0:37:46.37:46,0,299	0/0:24,0:25:56.90:0,57,577	0/0:22,0:22:28.55:0,29,277	0/0:12,0:12:21.04:0,21,225	0/1:9,15:25:31.47:476,0,31	1/1:7,10:17:3.16:221,3,0	1/1:11,12:22:6.98:562,7,0	0/1:10,14:25:25.19:559,0,25	0/0:27,0:27:66.12:0,66,721	0/1:22,0:22:73.41:224,0,73	0/1:22,0:22:25.98:190,0,26	0/1:31,0:29:99:152,0,114	0/1:19,0:19:81.76:214,0,82	0/1:39,0:39:99:176,0,108	0/1:4,9:14:46.21:259,0,46	1/1:14,3:16:24:281,24,0	0/1:11,33:45:27.54:1005,0,28	0/0:19,0:19:33.02:0,33,348	1/1:15,1:16:14.58:298,15,0	0/1:17,0:16:85.30:85,0,156	0/1:19,0:20:81.92:166,0,82
chr10	108921844	.	A	ACT	6897.43	PASS	AB=0.919;AC=29;AF=0.518;AN=56;BaseQRankSum=-4.906;DP=680;FS=3.100;HRun=0;HaplotypeScore=95.1609;InbreedingCoeff=-0.1084;MQ=62.04;MQ0=9;MQRankSum=2.198;QD=12.16;ReadPosRankSum=2.603;VQSLOD=4.6551;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,29:41:33.92:671,0,34	0/0:7,0:7:20.96:0,21,213	0/0:29,0:15:2.25:0,2,196	0/0:22,0:18:23.20:0,23,230	0/1:10,0:10:21.22:51,0,21	0/1:17,0:17:12:12,0,74	0/1:48,0:48:97.44:313,0,97	1/1:20,21:39:4.08:567,4,0	0/1:26,0:26:83.23:83,0,84	0/0:16,0:16:32.41:0,32,325	0/0:10,0:10:23.70:0,24,224	0/1:27,0:27:99:204,0,121	0/1:13,0:13:29.35:108,0,29	0/1:23,0:22:99:278,0,104	0/1:22,0:22:64.74:242,0,65	0/0:29,0:29:75.13:0,75,823	0/1:5,20:25:38.94:496,0,39	1/1:7,21:28:10.98:431,11,0	1/1:14,18:31:10.73:597,11,0	1/1:6,9:16:27.09:435,27,0	1/1:10,32:40:22.17:448,22,0	0/1:15,0:15:70.74:106,0,71	0/1:14,0:13:64.28:64,0,65	0/1:44,0:43:99:441,0,152	0/1:17,0:17:50.12:70,0,50	1/1:3,20:24:44.64:716,45,0	0/1:8,10:17:3.89:177,0,4	1/1:5,17:23:17.62:388,18,0
chr10	108922959	.	G	GACACACACAC	6681.09	PASS	AB=0.996;AC=34;AF=0.607;AN=56;BaseQRankSum=0.373;DP=509;FS=7.772;HRun=0;HaplotypeScore=198.8528;InbreedingCoeff=0.4867;MQ=55.53;MQ0=5;MQRankSum=-5.388;QD=17.35;ReadPosRankSum=-3.382;VQSLOD=2.6797;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:19:9.02:149,9,0	0/0:5,0:5:9.03:0,9,271	0/1:25,0:14:15.75:16,0,125	0/1:18,0:14:0.93:1,0,99	0/1:19,0:20:66.96:67,0,237	0/0:24,0:24:3.31:0,3,266	0/1:28,0:28:40.20:40,0,305	1/1:17,0:17:18.82:335,19,0	0/0:20,0:20:17.69:0,18,317	0/0:20,0:19:24.74:0,25,734	0/0:10,0:9:18.06:0,18,523	1/1:21,4:27:36.59:1367,37,0	1/1:11,7:18:22.01:954,22,0	1/1:14,2:16:26.28:754,26,0	1/1:14,1:16:8.78:317,9,0	0/0:11,0:11:18.02:0,18,299	0/1:27,0:26:4.26:441,0,4	1/1:18,0:17:23.52:448,24,0	1/1:15,0:15:25.33:395,25,0	1/1:9,0:9:2.97:25,3,0	0/1:36,0:36:0.18:1,0,0	0/0:14,2:17:0.17:0,0,0	1/1:9,0:11:3.01:97,3,0	1/1:25,1:27:5.71:260,6,0	0/0:17,0:17:11.08:0,11,336	1/1:10,0:11:15.05:345,15,0	1/1:17,0:16:26.92:530,27,0	1/1:4,0:3:6.02:140,6,0
chr10	108922984	.	ACG	A	2450.09	PASS	AB=1.000;AC=34;AF=0.680;AN=50;BaseQRankSum=0.262;DP=528;FS=1.231;HRun=0;HaplotypeScore=143.2540;InbreedingCoeff=0.2264;MQ=46.30;MQ0=3;MQRankSum=2.645;QD=6.14;ReadPosRankSum=-3.504;VQSLOD=2.7463;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:5,0:5:3.05:0,3,65	./.	./.	1/1:12,6:19:20.84:195,21,0	1/1:4,16:21:29.93:351,30,0	1/1:11,16:30:32.60:299,33,0	1/1:17,0:17:9.15:124,9,0	1/1:15,9:24:50.38:471,50,0	0/0:22,1:22:5.44:0,5,337	0/0:13,0:12:8.05:0,8,350	0/1:32,0:31:6.45:130,0,6	0/1:16,0:16:38.69:44,0,39	0/1:26,0:24:23.63:75,0,24	1/1:21,0:21:5.38:94,5,0	0/0:10,0:10:3.21:0,3,149	1/1:28,0:27:5.75:31,6,0	0/1:23,0:22:13.20:149,0,13	0/1:10,0:10:6.69:7,0,29	1/1:8,0:8:11.66:69,12,0	1/1:39,0:38:16.83:94,17,0	1/1:18,0:18:5.47:37,5,0	1/1:14,0:14:11.85:79,12,0	0/0:38,0:38:2.24:0,2,8	1/1:3,12:18:23.74:253,24,0	1/1:12,0:12:5.92:56,6,0	0/1:17,0:15:20.55:21,0,34	1/1:6,0:5:3.20:25,3,0
chr10	108932243	.	TGTAGATGGGTGAG	T	9048.17	PASS	AB=0.969;AC=11;AF=0.196;AN=56;BaseQRankSum=11.770;DP=700;FS=17.821;HRun=0;HaplotypeScore=289.5341;InbreedingCoeff=0.8949;MQ=84.24;MQ0=0;MQRankSum=-14.347;QD=69.60;ReadPosRankSum=2.793;VQSLOD=3.0473;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,7245	0/0:11,0:11:33.11:0,33,2191	0/0:16,0:16:45.05:0,45,2446	0/0:30,0:31:87.28:0,87,4676	1/1:1,9:10:24.08:842,24,0	1/1:2,8:10:24.08:915,24,0	1/1:4,19:23:51.17:2000,51,0	0/0:24,0:24:72.24:0,72,3554	1/1:1,32:33:84.29:3286,84,0	0/0:26,0:26:75.26:0,75,4659	0/0:19,0:19:57.15:0,57,3234	0/0:46,0:46:99:0,138,8620	0/0:26,0:26:78.27:0,78,5044	0/0:24,0:24:72.23:0,72,4303	0/0:31,0:31:93.32:0,93,5828	0/1:30,1:31:10.32:10,0,5651	0/0:24,0:24:66.23:0,66,3766	0/0:27,0:27:78.27:0,78,4351	0/0:31,0:31:93.32:0,93,4973	0/0:20,0:20:54.66:0,55,2938	0/0:33,0:33:96.29:0,96,5229	0/0:21,0:21:60.21:0,60,3888	0/0:17,0:17:51.18:0,51,3248	0/0:32,0:32:96.33:0,96,6198	1/1:1,22:23:54.18:1995,54,0	0/0:17,0:17:51.18:0,51,2777	0/0:37,0:37:99:0,111,6318	0/0:15,0:15:45.15:0,45,2525
chr10	108935666	.	CAG	C	5076.74	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.999;DP=503;FS=17.186;HRun=0;HaplotypeScore=117.3175;InbreedingCoeff=0.9653;MQ=80.78;MQ0=0;MQRankSum=-3.100;QD=39.35;ReadPosRankSum=4.895;VQSLOD=5.0039;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.18:0,54,989	0/0:5,0:5:15.05:0,15,255	0/0:19,0:19:53.39:0,53,848	0/0:21,0:21:52.68:0,53,1027	0/0:13,0:13:39.13:0,39,730	0/0:15,0:15:42.14:0,42,787	0/0:30,0:30:84.29:0,84,1562	0/0:20,0:20:57.20:0,57,1049	0/0:26,0:26:75.22:0,75,1331	0/0:13,0:13:39.13:0,39,704	0/0:7,0:7:21.07:0,21,393	1/1:2,23:25:69.23:1015,69,0	1/1:0,17:17:42.14:618,42,0	1/1:1,17:18:51.17:750,51,0	1/1:0,21:21:63.21:927,63,0	0/0:19,0:19:57.20:0,57,1067	0/0:23,0:23:66.21:0,66,1204	0/0:26,0:26:72.25:0,72,1348	0/0:18,0:18:45.15:0,45,834	0/0:11,0:11:33.10:0,33,587	0/0:58,0:58:99:0,166,3019	1/1:0,5:5:12.04:176,12,0	1/1:0,4:4:12.04:176,12,0	1/1:4,35:39:96.32:1413,96,0	0/0:12,0:12:36.11:0,36,634	0/0:8,0:8:21.07:0,21,393	0/0:9,0:9:27.08:0,27,457	0/0:2,0:2:6.02:0,6,112
chr10	108937550	.	CTCTCTCTA	C	4120.19	PASS	AB=0.957;AC=36;AF=0.643;AN=56;BaseQRankSum=0.953;DP=760;FS=6.552;HRun=0;HaplotypeScore=163.7973;InbreedingCoeff=0.2425;MQ=61.25;MQ0=52;MQRankSum=-1.777;QD=8.64;ReadPosRankSum=-3.467;VQSLOD=1.4586;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:44.28:359,44,0	0/0:20,0:20:9.15:0,9,440	0/0:91,0:14:11.47:0,11,66	0/0:133,0:37:14.75:0,15,216	0/1:18,0:18:49.47:72,0,49	0/1:32,0:32:99:102,0,124	0/1:34,0:33:30.35:30,0,116	1/1:28,0:28:38.76:296,39,0	0/1:20,0:20:99:109,0,143	0/1:36,0:32:1.51:2,0,1009	0/1:14,0:13:21.06:21,0,159	1/1:17,0:17:35.84:282,36,0	1/1:15,0:15:23.58:183,24,0	1/1:19,1:20:38.64:397,39,0	1/1:18,0:18:29.96:270,30,0	0/1:17,0:17:2.49:2,0,632	1/1:20,0:19:38.81:301,39,0	1/1:21,0:20:34.46:316,34,0	1/1:7,0:5:11.99:103,12,0	1/1:17,0:17:29.86:234,30,0	1/1:21,0:20:35.87:286,36,0	0/0:25,0:24:0.47:0,0,1	0/0:1,13:14:0.47:0,0,1	0/1:8,25:31:0.31:0,0,0	0/1:18,0:18:42.32:42,0,236	0/1:21,0:20:11.08:394,0,11	1/1:9,0:9:20.89:161,21,0	1/1:15,0:14:23.03:157,23,0
chr10	108937556	.	CTA	C	4862.63	PASS	AB=0.961;AC=40;AF=0.714;AN=56;BaseQRankSum=0.713;DP=746;FS=23.134;HRun=0;HaplotypeScore=113.4394;InbreedingCoeff=0.1112;MQ=56.93;MQ0=53;MQRankSum=0.276;QD=8.84;ReadPosRankSum=-4.877;VQSLOD=2.2578;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:59.67:482,60,0	0/1:22,0:22:55.61:56,0,159	0/0:76,0:8:11.35:0,11,64	0/0:120,0:27:19.19:0,19,222	0/1:17,0:17:41.56:91,0,42	0/1:28,0:28:26.28:26,0,131	0/1:35,0:34:33.19:33,0,116	1/1:25,0:22:41.74:317,42,0	0/1:23,0:22:99:149,0,136	0/1:33,0:29:32.30:32,0,365	0/1:18,0:17:60.81:61,0,88	1/1:16,0:16:35.84:282,36,0	1/1:14,0:14:22.97:182,23,0	1/1:21,0:21:44.74:341,45,0	1/1:17,1:18:29.89:238,30,0	0/1:17,0:17:36.28:36,0,231	1/1:23,0:22:47.56:370,48,0	1/1:25,0:23:42.70:367,43,0	1/1:7,0:5:15:131,15,0	1/1:20,0:20:41.53:333,42,0	1/1:21,0:19:38.45:309,38,0	0/1:3,23:25:0:0,0,0	0/1:14,0:14:0.09:0,0,1	0/1:31,0:29:0.39:0,0,0	0/1:18,0:18:42.33:42,0,236	1/1:23,0:21:42.88:486,43,0	1/1:12,0:12:35.83:276,36,0	1/1:14,0:13:31.58:220,32,0
chr10	108937774	.	TCG	T	3467.31	PASS	AB=1.000;AC=48;AF=0.923;AN=52;BaseQRankSum=0.481;DP=371;FS=15.407;HRun=0;HaplotypeScore=56.9648;InbreedingCoeff=0.1647;MQ=42.21;MQ0=78;MQRankSum=0.617;QD=9.69;ReadPosRankSum=-1.395;VQSLOD=1.6199;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:24:53.84:433,54,0	1/1:6,0:4:2.96:22,3,0	./.	./.	1/1:9,0:9:5.99:50,6,0	1/1:15,0:15:29.85:242,30,0	1/1:14,0:12:17.20:130,17,0	1/1:10,0:4:8.96:68,9,0	1/1:16,0:15:26.97:226,27,0	0/1:26,0:18:41.76:42,0,95	1/1:10,0:9:2.90:16,3,0	1/1:15,0:14:26.99:231,27,0	1/1:18,0:14:26.90:214,27,0	1/1:12,0:12:17.78:145,18,0	1/1:12,0:8:5.96:45,6,0	0/1:13,0:8:12.37:67,0,12	1/1:19,0:17:35.77:272,36,0	1/1:12,0:9:25.93:192,26,0	1/1:9,0:5:14.99:133,15,0	1/1:8,0:5:8.98:72,9,0	1/1:20,0:15:17.48:150,17,0	0/0:4,8:9:2.98:0,3,21	1/1:14,0:9:20.69:155,21,0	1/1:22,0:20:20.87:168,21,0	1/1:8,0:7:8.98:75,9,0	1/1:5,7:9:24.77:180,25,0	1/1:10,0:8:12.46:101,12,0	1/1:18,0:4:5.94:41,6,0
chr10	108939350	.	CACCGACG	C	10492.94	PASS	AB=0.545;AC=43;AF=0.796;AN=54;BaseQRankSum=6.297;DP=322;FS=32.728;HRun=0;HaplotypeScore=87.8094;InbreedingCoeff=0.7445;MQ=81.56;MQ0=3;MQRankSum=-9.401;QD=40.05;ReadPosRankSum=1.761;VQSLOD=2.8037;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,10:19:12.04:292,12,0	./.	0/0:14,0:14:24.08:0,24,776	0/0:13,0:13:15.02:0,15,335	1/1:1,5:6:3.01:73,3,0	1/1:3,6:8:12.04:292,12,0	1/1:4,14:18:33.11:695,33,0	1/1:3,6:9:15.05:361,15,0	1/1:4,17:20:48.16:1095,48,0	0/0:12,0:12:36.09:0,36,1267	0/0:7,0:7:18.06:0,18,690	1/1:0,13:13:33.11:769,33,0	1/1:0,14:14:42.14:1022,42,0	1/1:1,17:18:39.13:949,39,0	1/1:0,12:12:36.12:877,36,0	0/0:13,0:13:39.13:0,39,1496	1/1:2,9:11:18.06:403,18,0	1/1:2,5:7:15.05:365,15,0	1/1:6,10:16:30.08:576,30,0	1/1:1,1:2:3.01:73,3,0	1/1:20,10:30:9.03:110,9,0	1/1:4,6:10:12.04:292,12,0	1/1:1,6:7:12.04:292,12,0	1/1:2,8:10:15.05:365,15,0	1/1:0,9:9:12.04:292,12,0	0/1:1,5:6:97.02:347,0,97	1/1:1,11:12:33.11:804,33,0	1/1:0,2:2:6.02:146,6,0
chr10	108945522	.	T	TG	7878.34	PASS	AB=0.804;AC=44;AF=0.786;AN=56;BaseQRankSum=-3.898;DP=508;FS=1.599;HRun=8;HaplotypeScore=72.0310;InbreedingCoeff=0.7647;MQ=88.17;MQ0=0;MQRankSum=-4.853;QD=19.17;ReadPosRankSum=2.652;VQSLOD=4.8720;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,40:48:80.86:1181,81,0	0/1:8,0:8:0.98:1,0,113	0/0:30,1:27:41.34:0,41,390	0/0:23,0:21:39.24:0,39,332	1/1:20,0:20:44.76:342,45,0	1/1:14,0:14:35.78:272,36,0	1/1:37,0:37:86.39:641,86,0	1/1:5,15:20:17.58:412,18,0	1/1:24,0:24:71.69:552,72,0	0/0:14,0:14:35.98:0,36,323	0/0:8,0:8:15:0,15,137	1/1:11,0:11:10.63:68,11,0	1/1:4,0:4:2.94:18,3,0	1/1:9,0:11:13.85:70,14,0	1/1:1,0:6:11.36:57,11,0	0/0:20,0:20:47.73:0,48,419	1/1:2,22:24:51.15:589,51,0	1/1:5,12:17:39.12:450,39,0	1/1:5,6:11:21.06:239,21,0	1/1:5,9:14:21:225,21,0	1/1:9,35:45:41.02:963,41,0	1/1:4,0:9:8.19:39,8,0	1/1:5,0:6:5.83:39,6,0	1/1:1,0:4:5.68:29,6,0	1/1:22,0:22:50.60:364,51,0	1/1:3,14:17:42.12:482,42,0	1/1:4,20:25:56.48:627,56,0	0/1:5,9:14:3.36:218,0,3
chr10	108945528	.	G	GC	5271.54	PASS	AB=0.988;AC=23;AF=0.411;AN=56;BaseQRankSum=-2.862;DP=485;FS=9.288;HRun=0;HaplotypeScore=72.4247;InbreedingCoeff=0.3389;MQ=85.14;MQ0=0;MQRankSum=-2.855;QD=15.32;ReadPosRankSum=9.341;VQSLOD=4.9011;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:47,0:47:80.19:205,0,80	0/1:7,1:8:19.90:20,0,228	0/0:29,0:25:64.96:0,65,748	0/0:20,0:17:39.54:0,40,442	1/1:0,20:20:45.15:655,45,0	1/1:0,14:14:36.12:518,36,0	1/1:0,35:35:87.29:1262,87,0	0/1:17,0:17:37.93:84,0,38	1/1:0,26:26:72.24:1049,72,0	0/0:14,0:14:42.11:0,42,553	0/0:7,0:7:18.05:0,18,234	0/0:11,0:11:18.02:0,18,113	0/0:4,0:4:8.36:0,8,58	0/0:9,0:9:17.73:0,18,109	0/0:6,0:6:10.26:0,10,42	0/0:20,0:20:60.12:0,60,747	0/1:26,0:26:1.58:90,0,2	1/1:13,0:13:30.17:95,30,0	0/1:11,0:11:24.98:25,0,67	0/1:14,0:14:37.02:37,0,79	0/1:41,0:41:63.87:158,0,64	0/0:10,0:10:14.40:0,14,103	0/0:5,0:5:3.47:0,3,10	0/0:6,0:6:11.75:0,12,77	1/1:0,19:19:51.17:744,51,0	0/1:17,0:17:8.20:128,0,8	1/1:22,0:22:35.19:171,35,0	0/1:14,0:14:30.56:31,0,110
chr10	108947371	.	CAAAAAA	C	6113.83	PASS	AB=0.742;AC=33;AF=0.589;AN=56;BaseQRankSum=8.478;DP=559;FS=1.982;HRun=19;HaplotypeScore=126.4274;InbreedingCoeff=0.8737;MQ=71.07;MQ0=1;MQRankSum=-9.930;QD=21.08;ReadPosRankSum=8.625;VQSLOD=0.6464;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,10:27:30.40:484,30,0	0/0:12,0:15:36.12:0,36,991	0/0:58,0:26:7.04:0,7,534	0/0:31,0:14:20.02:0,20,244	0/0:15,0:31:67.75:0,68,1675	0/0:11,0:31:39.11:0,39,1009	0/0:18,0:18:43.37:0,43,1097	1/1:7,1:10:14.58:167,15,0	0/0:11,0:11:18.06:0,18,443	0/0:17,0:21:42.13:0,42,867	0/0:17,0:17:45.15:0,45,1157	1/1:7,9:17:35.54:556,36,0	1/1:13,2:17:13.79:170,14,0	1/1:8,5:13:14.29:245,14,0	1/1:13,13:27:23.62:651,24,0	0/0:12,0:15:36.12:0,36,824	1/1:6,8:15:29.55:450,30,0	1/1:3,4:8:14.78:227,15,0	1/1:12,2:15:22.33:265,22,0	1/1:10,11:24:36.59:633,37,0	1/1:9,4:13:5.19:97,5,0	1/1:5,8:15:35.64:518,36,0	1/1:11,7:21:26.02:396,26,0	1/1:8,9:18:17.75:276,18,0	0/0:12,0:21:30.10:0,30,759	0/1:15,6:23:40.98:316,0,41	1/1:10,9:20:35.15:516,35,0	1/1:4,3:7:8.63:147,9,0
chr10	108947432	.	C	CA	13391.30	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-8.488;DP=651;FS=1.030;HRun=6;HaplotypeScore=79.3495;InbreedingCoeff=0.9998;MQ=86.25;MQ0=0;MQRankSum=-7.717;QD=31.36;ReadPosRankSum=0.681;VQSLOD=5.1289;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,35:36:84.27:1056,84,0	0/0:13,0:13:36.08:0,36,367	0/0:26,0:26:63.11:0,63,627	0/0:26,0:26:64.79:0,65,616	0/0:20,0:20:51.10:0,51,520	0/0:19,0:19:30.07:0,30,306	0/0:23,0:23:69.13:0,69,696	1/1:3,26:29:78.23:965,78,0	0/0:11,0:11:30.07:0,30,306	0/0:20,0:20:60.12:0,60,602	0/0:25,0:25:69.15:0,69,704	1/1:1,17:18:48.15:604,48,0	1/1:0,21:21:54.17:679,54,0	1/1:2,15:17:45.08:533,45,0	1/1:4,25:29:69.22:868,69,0	0/0:21,0:21:57.12:0,57,581	1/1:2,27:29:75.24:943,75,0	1/1:2,11:13:33.11:415,33,0	1/1:3,19:22:57.16:701,57,0	1/1:2,33:35:93.26:1152,93,0	1/1:0,27:27:69.18:850,69,0	1/1:4,24:28:72.19:885,72,0	1/1:1,24:25:63.20:792,63,0	1/1:5,29:34:75.24:944,75,0	0/0:19,0:19:51.12:0,51,520	1/1:4,18:22:54.17:678,54,0	1/1:4,23:28:69.05:834,69,0	1/1:0,14:14:39.12:491,39,0
chr10	108948697	.	GGAA	G	10847.78	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=18.176;DP=716;FS=0.000;HRun=0;HaplotypeScore=125.7956;InbreedingCoeff=0.9731;MQ=63.86;MQ0=14;MQRankSum=-2.301;QD=25.46;ReadPosRankSum=3.447;VQSLOD=4.9993;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,37:41:75.20:1132,75,0	0/0:14,0:14:36.11:0,36,697	0/0:20,0:15:2.89:0,3,272	0/0:32,0:23:26.16:0,26,463	0/0:26,0:26:72.22:0,72,1449	0/0:29,0:28:81.21:0,81,1511	0/0:33,0:33:93.20:0,93,1543	1/1:12,19:28:56.62:686,57,0	0/0:34,0:34:99:0,99,1925	0/0:31,0:31:84.23:0,84,1606	0/0:13,0:13:39.09:0,39,779	1/1:2,19:21:38.90:581,39,0	1/1:2,14:16:36.12:539,36,0	1/1:0,20:20:27.09:414,27,0	1/1:3,23:26:45.11:652,45,0	0/0:33,0:33:96.29:0,96,1882	1/1:1,23:23:42.14:649,42,0	1/1:1,10:11:23.98:308,24,0	1/1:10,11:17:30.04:348,30,0	1/1:3,21:22:54.04:736,54,0	1/1:6,28:31:45.10:667,45,0	1/1:6,29:34:65.92:849,66,0	1/1:3,24:27:41.83:649,42,0	1/1:6,20:25:33.06:482,33,0	0/0:25,0:25:75.25:0,75,1568	1/1:2,26:27:78.24:1170,78,0	1/1:3,23:26:45.02:684,45,0	1/1:3,12:13:21.05:300,21,0
chr10	108949084	.	GGT	G	3048.80	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=-0.575;DP=530;FS=8.537;HRun=0;HaplotypeScore=79.2521;InbreedingCoeff=0.7365;MQ=72.54;MQ0=14;MQRankSum=-0.033;QD=9.62;ReadPosRankSum=0.877;VQSLOD=2.3607;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:17.02:189,17,0	0/0:8,0:8:20.68:0,21,179	0/0:67,0:26:16.35:0,16,319	0/1:43,0:12:0.59:1,0,129	0/0:22,0:22:49.17:0,49,495	0/0:22,0:21:38.82:0,39,383	0/0:11,0:11:22.61:0,23,234	1/1:29,0:28:40.75:357,41,0	0/0:10,0:10:23.55:0,24,199	0/0:21,0:20:40.60:0,41,467	0/0:19,0:18:38.43:0,38,353	1/1:16,1:17:6.05:182,6,0	1/1:16,0:16:3.77:139,4,0	0/1:10,0:10:3.10:90,0,3	1/1:12,0:12:11.91:174,12,0	0/0:9,0:9:26.96:0,27,264	1/1:23,0:23:5.92:42,6,0	1/1:14,0:14:23.93:199,24,0	1/1:23,1:23:45.92:363,46,0	1/1:12,0:12:31.67:237,32,0	0/1:4,0:4:3.16:25,0,3	1/1:9,0:9:6.26:50,6,0	1/1:23,0:23:32.39:280,32,0	0/1:11,0:10:4.05:98,0,4	0/0:24,0:24:64.76:0,65,692	1/1:17,0:17:19.41:266,19,0	1/1:25,0:25:42.95:351,43,0	1/1:9,2:11:22.77:214,23,0
chr10	108949086	.	TG	T	4718.44	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=3.864;DP=573;FS=47.999;HRun=3;HaplotypeScore=83.5845;InbreedingCoeff=0.6814;MQ=72.07;MQ0=15;MQRankSum=-2.179;QD=12.07;ReadPosRankSum=-4.351;VQSLOD=0.2568;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:49.55:340,50,0	0/0:8,0:8:12.77:0,13,117	0/0:69,0:27:19.11:0,19,322	0/1:44,0:12:0.73:1,0,134	0/1:26,0:26:28.51:29,0,313	0/0:28,0:27:29.76:0,30,300	0/1:13,0:13:14.85:15,0,150	1/1:7,20:27:58.24:423,58,0	0/1:14,0:14:35.94:36,0,101	0/0:21,0:20:40.14:0,40,399	0/0:19,0:18:34.19:0,34,299	1/1:16,1:17:45:295,45,0	1/1:15,2:17:45.84:279,46,0	1/1:12,1:13:28.58:186,29,0	1/1:12,1:13:36.23:268,36,0	0/0:11,0:11:26.73:0,27,223	1/1:2,24:26:5.92:43,6,0	1/1:15,0:15:28.68:213,29,0	1/1:22,1:22:47.97:420,48,0	1/1:15,0:15:33.98:267,34,0	1/1:4,0:4:7.24:54,7,0	1/1:6,1:7:16.20:103,16,0	1/1:25,2:26:62.71:473,63,0	1/1:9,3:11:24.09:198,24,0	0/0:26,0:26:20.11:0,20,469	1/1:17,0:17:40.89:322,41,0	1/1:24,2:26:64.39:514,64,0	1/1:12,1:13:26.94:240,27,0
chr10	108950734	.	GC	G	4715.68	PASS	AB=0.610;AC=32;AF=0.615;AN=52;BaseQRankSum=9.998;DP=272;FS=3.061;HRun=2;HaplotypeScore=101.3093;InbreedingCoeff=0.7414;MQ=32.59;MQ0=12;MQRankSum=-3.303;QD=22.56;ReadPosRankSum=5.273;VQSLOD=4.9493;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:21:42.13:504,42,0	0/0:4,0:3:9.03:0,9,135	./.	./.	0/0:5,0:5:6.02:0,6,78	0/0:6,0:6:15.05:0,15,218	0/0:17,0:17:51.13:0,51,726	1/1:5,6:9:17.27:199,17,0	0/0:3,0:3:6.02:0,6,90	0/0:7,0:6:18.06:0,18,260	0/0:8,0:8:12.04:0,12,155	1/1:0,3:3:9.03:111,9,0	1/1:2,6:7:18.06:223,18,0	1/1:1,11:12:27.08:324,27,0	1/1:2,12:12:27.08:329,27,0	0/0:4,0:3:9.03:0,9,134	1/1:4,13:15:36.11:441,36,0	0/1:8,10:17:59.50:270,0,60	1/1:3,9:10:23.37:303,23,0	1/1:2,6:8:15.05:178,15,0	1/1:0,5:5:6.90:75,7,0	1/1:0,10:10:18.06:219,18,0	1/1:3,8:11:15.04:179,15,0	0/1:4,11:13:64.30:195,0,64	0/0:6,0:6:15.05:0,15,204	1/1:1,16:15:39.12:490,39,0	1/1:5,9:13:32.84:381,33,0	1/1:3,7:10:24.07:296,24,0
chr10	108950739	.	GCAAGCGCAA	G	11948.05	PASS	AB=0.573;AC=31;AF=0.596;AN=52;BaseQRankSum=10.460;DP=244;FS=2.875;HRun=0;HaplotypeScore=102.1708;InbreedingCoeff=0.6587;MQ=31.73;MQ0=11;MQRankSum=-4.438;QD=64.94;ReadPosRankSum=5.837;VQSLOD=4.6367;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:18:42.14:1271,42,0	0/0:3,0:2:6.02:0,6,302	./.	./.	0/0:4,0:4:8.96:0,9,321	0/0:6,0:6:18.06:0,18,728	0/0:18,0:18:54.16:0,54,2354	0/1:2,7:7:70.86:548,0,71	0/0:3,0:3:9.03:0,9,394	0/0:8,0:7:21.07:0,21,946	0/0:7,0:6:15:0,15,612	1/1:0,3:3:9.03:288,9,0	1/1:1,6:6:18.06:472,18,0	1/1:0,11:11:27.09:855,27,0	1/1:0,12:10:27.09:858,27,0	0/0:4,0:3:8.96:0,9,321	1/1:2,13:13:36.12:1148,36,0	0/1:6,10:15:99:724,0,228	1/1:4,8:9:3.24:656,3,0	1/1:0,7:7:18.02:492,18,0	1/1:0,5:5:9.03:246,9,0	1/1:0,10:10:21.07:616,21,0	1/1:0,9:9:12.04:382,12,0	0/1:2,11:11:99:606,0,206	0/0:6,0:6:15.05:0,15,654	1/1:0,16:14:39.13:1255,39,0	1/1:2,9:10:30.09:862,30,0	1/1:0,7:7:21.07:670,21,0
chr10	108950942	.	GA	G	4179.83	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.277;DP=622;FS=1.782;HRun=1;HaplotypeScore=59.5014;InbreedingCoeff=0.9979;MQ=69.72;MQ0=0;MQRankSum=-0.306;QD=37.66;ReadPosRankSum=0.513;VQSLOD=4.0764;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:99:0,120,1861	0/0:6,0:6:18.06:0,18,267	0/0:25,0:25:72.21:0,72,1040	0/0:24,0:24:69.69:0,70,1027	1/1:0,23:23:66.22:921,66,0	1/1:0,20:20:54.18:750,54,0	1/1:0,23:22:63.13:836,63,0	0/0:25,0:25:72.23:0,72,1068	1/1:0,31:31:84.28:1170,84,0	0/0:16,0:16:48.15:0,48,731	0/0:24,0:24:69.22:0,69,1042	0/0:19,0:19:54.17:0,54,818	0/0:21,0:20:60.20:0,60,936	0/0:19,0:19:48.16:0,48,749	0/0:25,0:23:66.22:0,66,977	0/0:22,0:22:66.18:0,66,985	0/0:25,0:25:75.26:0,75,1171	0/0:28,0:28:84.26:0,84,1289	0/0:15,0:15:45.14:0,45,667	0/0:23,0:23:69.20:0,69,1018	0/0:43,0:43:99:0,123,1861	0/0:12,0:12:33.10:0,33,494	0/0:12,0:12:33.11:0,33,500	0/0:34,2:36:60.40:0,60,1490	1/1:0,14:14:36.12:503,36,0	0/0:15,0:13:39.13:0,39,608	0/0:22,0:21:63.17:0,63,956	0/0:12,0:12:36.12:0,36,563
chr10	108951353	.	T	TGA	537.08	PASS	AB=0.746;AC=1;AF=0.018;AN=56;BaseQRankSum=-2.167;DP=634;FS=6.455;HRun=0;HaplotypeScore=83.0256;InbreedingCoeff=-0.0230;MQ=75.09;MQ0=1;MQRankSum=1.048;QD=12.21;ReadPosRankSum=-0.323;VQSLOD=2.7483;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,15:44:99:612,0,597	0/0:12,0:12:21.07:0,21,258	0/0:32,0:31:22.51:0,23,466	0/0:23,0:22:4.98:0,5,251	0/0:23,0:25:65.87:0,66,760	0/0:17,0:18:41.16:0,41,486	0/0:22,0:23:57.01:0,57,677	0/0:26,0:26:42.11:0,42,495	0/0:22,0:22:45.13:0,45,541	0/0:23,0:23:57.17:0,57,693	0/0:18,0:18:45.13:0,45,541	0/0:16,0:16:33.07:0,33,374	0/0:23,0:23:60.19:0,60,738	0/0:19,0:20:41.96:0,42,493	0/0:28,0:28:66.19:0,66,800	0/0:25,0:25:69.20:0,69,827	0/0:34,0:34:75.18:0,75,882	0/0:24,0:26:56.82:0,57,642	0/0:18,0:18:30.09:0,30,369	0/0:26,0:26:66.20:0,66,800	0/0:23,0:25:50.99:0,51,604	0/0:16,0:17:32.92:0,33,371	0/0:10,0:11:32.80:0,33,361	0/0:21,0:21:51.16:0,51,628	0/0:14,0:15:35.93:0,36,408	0/0:15,0:15:33.10:0,33,406	0/0:31,0:33:78.06:0,78,924	0/0:14,0:15:44.97:0,45,530
chr10	108951920	.	C	CTT	4771.99	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=5.496;DP=559;FS=11.278;HRun=2;HaplotypeScore=102.1688;InbreedingCoeff=0.8262;MQ=73.06;MQ0=9;MQRankSum=-3.757;QD=13.56;ReadPosRankSum=-3.002;VQSLOD=0.3191;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:33:52.23:509,52,0	0/0:8,0:8:17.98:0,18,150	0/0:34,0:18:36.86:0,37,403	0/0:44,0:24:17.49:0,17,354	0/0:26,0:26:44.94:0,45,487	0/0:14,0:14:33:0,33,273	0/0:14,0:14:14.41:0,14,227	1/1:22,0:22:51.91:484,52,0	0/1:20,0:20:49.25:49,0,196	0/0:18,0:18:46.16:0,46,478	0/0:21,0:21:45.03:0,45,553	1/1:9,0:9:3.01:39,3,0	1/1:18,0:18:3.01:39,3,0	1/1:20,1:21:11.25:142,11,0	1/1:21,2:23:21.06:307,21,0	0/0:16,0:16:39:0,39,398	1/1:22,0:22:55.58:460,56,0	1/1:20,0:19:34.27:308,34,0	1/1:22,0:21:51.71:475,52,0	1/1:24,0:23:66.12:540,66,0	1/1:23,1:24:52.98:442,53,0	1/1:14,0:14:20.76:155,21,0	1/1:1,9:10:3.48:57,3,0	1/1:27,0:27:7.26:54,7,0	0/0:12,0:12:22.91:0,23,198	1/1:16,0:16:40.49:351,40,0	1/1:14,0:13:15.85:171,16,0	1/1:12,0:11:21.01:191,21,0
chr10	108951921	.	T	TTTTC	6513.57	PASS	AB=0.683;AC=33;AF=0.589;AN=56;BaseQRankSum=5.875;DP=636;FS=19.922;HRun=0;HaplotypeScore=141.7226;InbreedingCoeff=0.6790;MQ=69.99;MQ0=9;MQRankSum=-4.913;QD=15.96;ReadPosRankSum=-3.160;VQSLOD=2.8305;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:39:68.74:592,69,0	0/0:8,0:9:17.99:0,18,164	0/0:35,0:18:36.28:0,36,402	0/0:45,0:24:17.40:0,17,353	0/0:29,0:29:0.41:0,0,439	0/0:22,0:22:32.96:0,33,272	0/0:16,0:15:11.98:0,12,223	1/1:23,0:23:58.26:551,58,0	0/1:22,0:22:99:189,0,192	0/0:18,0:18:45.90:0,46,523	0/0:19,0:21:45.05:0,45,708	1/1:3,9:15:6.02:128,6,0	0/1:2,16:19:13.27:77,0,13	1/1:4,18:25:4.76:192,5,0	1/1:7,15:26:20.88:375,21,0	0/0:16,0:16:39:0,39,450	1/1:21,0:22:57.47:641,57,0	1/1:13,0:19:45.37:407,45,0	1/1:25,0:24:63.53:661,64,0	1/1:28,0:27:65.76:566,66,0	1/1:24,0:26:56.97:611,57,0	1/1:2,14:16:16.93:245,17,0	1/1:10,0:10:2.80:35,3,0	0/1:3,29:37:0.33:118,0,0	0/0:16,0:17:1.16:0,1,175	1/1:22,0:21:52.72:535,53,0	1/1:15,0:19:41.45:376,41,0	1/1:12,0:11:21.01:215,21,0
chr10	108951922	.	T	TTTCTCTCT	7611.32	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=5.065;DP=651;FS=19.857;HRun=0;HaplotypeScore=173.5990;InbreedingCoeff=0.4522;MQ=69.11;MQ0=10;MQRankSum=-4.713;QD=15.99;ReadPosRankSum=-2.788;VQSLOD=2.5889;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:39:69.35:784,69,0	0/0:9,0:9:17.99:0,18,192	0/0:37,0:18:36.27:0,36,402	0/0:46,0:24:17.81:0,18,355	0/1:30,0:30:62.83:63,0,440	0/0:25,0:25:32.92:0,33,272	0/1:16,0:15:4.56:5,0,188	1/1:23,0:23:59.06:575,59,0	0/1:23,0:23:99:188,0,191	0/0:19,0:19:45.57:0,46,601	0/0:23,0:23:45.11:0,45,943	1/1:15,0:15:6.01:72,6,0	0/1:19,0:19:13.95:40,0,14	0/1:22,0:22:19.69:124,0,20	1/1:26,0:26:20.17:173,20,0	0/0:16,0:16:39:0,39,527	1/1:21,0:21:54.54:682,55,0	1/1:20,0:19:48.02:725,48,0	1/1:27,0:26:59.62:764,60,0	1/1:29,0:28:66.16:562,66,0	1/1:26,0:26:57.06:798,57,0	1/1:20,0:20:16.65:166,17,0	1/1:10,0:10:2.74:12,3,0	0/1:38,0:38:35.07:93,0,35	0/1:17,0:17:62.89:63,0,174	1/1:21,0:20:54.04:750,54,0	1/1:21,0:20:41.68:700,42,0	1/1:7,4:11:21.01:274,21,0
chr10	108952398	.	T	TACACACACAC	7285.44	PASS	AC=46;AF=0.852;AN=54;BaseQRankSum=2.509;DP=617;FS=0.927;HRun=0;HaplotypeScore=208.7682;InbreedingCoeff=0.6068;MQ=62.60;MQ0=4;MQRankSum=-3.616;QD=13.85;ReadPosRankSum=-2.458;VQSLOD=3.2582;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:45,0:45:8.89:151,9,0	0/0:6,0:6:12.04:0,12,343	1/1:31,0:24:2.49:6,2,0	./.	1/1:5,0:13:2.68:11,3,0	1/1:11,3:24:3.01:147,3,0	1/1:34,0:34:23.07:716,23,0	1/1:28,0:28:38.41:611,38,0	1/1:4,0:14:7.43:241,7,0	0/0:23,0:22:4.44:0,4,352	0/0:14,0:16:12.02:0,12,204	1/1:19,0:19:9.03:226,9,0	1/1:26,0:25:30.06:774,30,0	1/1:22,0:22:21:470,21,0	1/1:23,0:23:15.03:385,15,0	0/0:16,0:18:17.79:0,18,431	1/1:30,0:30:36.57:1060,37,0	1/1:16,0:16:9.50:301,10,0	1/1:18,0:17:14.68:344,15,0	1/1:11,0:10:2.90:16,3,0	1/1:31,0:30:11.24:112,11,0	1/1:26,0:26:9.01:221,9,0	1/1:10,0:9:3.01:62,3,0	1/1:32,0:32:3.01:52,3,0	1/1:10,7:23:6.02:297,6,0	1/1:26,0:25:20.93:543,21,0	1/1:18,0:18:14.29:276,14,0	1/1:6,0:6:9.03:265,9,0
chr10	108952424	.	C	CACACACACACACACACACACAA	13501.96	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=1.797;DP=654;FS=28.904;HRun=0;HaplotypeScore=293.5878;InbreedingCoeff=0.6407;MQ=53.31;MQ0=10;MQRankSum=-6.010;QD=27.11;ReadPosRankSum=0.516;VQSLOD=2.5547;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:50,0:49:68.56:863,69,0	0/0:6,0:6:18.03:0,18,640	0/0:40,0:23:36.68:0,37,427	0/0:34,0:12:12.04:0,12,205	0/0:19,0:18:17.49:0,17,135	0/1:19,0:19:38.91:43,0,39	0/1:28,0:28:99:142,0,138	1/1:37,0:37:83.88:1298,84,0	0/1:14,0:14:49.52:50,0,60	0/0:26,0:24:56.71:0,57,878	0/0:17,0:17:29.39:0,29,425	1/1:17,0:17:29.43:303,29,0	1/1:22,0:21:53.94:943,54,0	1/1:24,0:24:46.87:1049,47,0	1/1:19,0:19:38.22:955,38,0	0/0:14,0:14:24.04:0,24,875	1/1:30,0:30:68.64:1548,69,0	1/1:15,0:15:35.60:752,36,0	1/1:24,0:23:56.91:1032,57,0	1/1:5,0:27:18.69:187,19,0	1/1:31,0:29:27.75:386,28,0	1/1:25,0:25:53.33:872,53,0	1/1:10,0:9:14.98:190,15,0	1/1:8,15:38:0.47:1,0,0	0/1:18,0:18:37.89:70,0,38	1/1:22,0:21:25.17:1574,25,0	1/1:21,0:21:51.81:742,52,0	1/1:6,0:6:18.01:502,18,0
chr10	108953160	.	CTG	C	2220.75	PASS	AB=0.587;AC=30;AF=0.536;AN=56;BaseQRankSum=9.052;DP=486;FS=1.697;HRun=0;HaplotypeScore=102.0169;InbreedingCoeff=0.6152;MQ=58.47;MQ0=10;MQRankSum=-4.884;QD=8.10;ReadPosRankSum=-0.643;VQSLOD=3.4412;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,9:22:8.20:58,8,0	0/0:10,0:10:30.10:0,30,544	0/0:17,0:11:10.90:0,11,219	0/0:39,0:20:28.65:0,29,424	0/0:17,0:17:30.08:0,30,507	0/0:19,0:19:51.17:0,51,964	0/0:25,0:25:75.26:0,75,1391	1/1:10,19:20:32.70:546,33,0	0/0:23,0:23:66.18:0,66,1138	0/0:16,0:16:48.16:0,48,841	0/0:17,0:17:23.95:0,24,392	1/1:1,5:20:3.25:59,3,0	0/1:4,10:13:4.95:139,0,5	1/1:4,9:19:2.66:69,3,0	0/1:3,2:14:1.70:32,0,2	0/0:13,0:13:36.07:0,36,577	1/1:5,4:14:8.13:107,8,0	1/1:8,2:10:10.01:157,10,0	1/1:9,8:17:30.75:432,31,0	1/1:5,4:9:6.02:84,6,0	0/1:9,20:29:10.80:39,0,11	1/1:7,3:8:2.89:25,3,0	1/1:3,0:3:3.01:44,3,0	1/1:7,4:22:8.69:74,9,0	0/0:16,0:16:36.09:0,36,617	1/1:4,2:13:25.06:288,25,0	1/1:2,6:8:14.42:151,14,0	0/1:4,7:11:14.21:113,0,14
chr10	108953166	.	CTG	C	937.67	PASS	AB=0.967;AC=25;AF=0.463;AN=54;BaseQRankSum=10.849;DP=486;FS=1.800;HRun=0;HaplotypeScore=108.4033;InbreedingCoeff=0.6358;MQ=54.31;MQ0=10;MQRankSum=-6.172;QD=3.68;ReadPosRankSum=-0.273;VQSLOD=1.9587;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,2:23:7.38:94,7,0	0/0:10,0:10:30.10:0,30,536	0/0:14,0:8:3.35:0,3,80	0/0:40,0:21:7.33:0,7,340	0/0:17,0:17:30.02:0,30,482	0/0:20,0:20:54.14:0,54,987	0/0:26,0:26:75.26:0,75,1390	0/1:25,2:18:53.72:105,0,54	0/0:23,0:23:66.17:0,66,1165	0/0:16,0:16:42.13:0,42,728	0/0:15,0:15:24.01:0,24,405	1/1:21,0:20:7.80:63,8,0	1/1:14,1:13:1.87:61,2,0	1/1:22,0:19:9.91:70,10,0	1/1:14,0:13:6.48:59,6,0	0/0:11,0:11:32.97:0,33,513	1/1:15,1:15:10.67:59,11,0	1/1:6,0:6:7.44:68,7,0	1/1:18,1:18:41.89:278,42,0	0/0:10,1:10:1.72:0,2,4	0/1:30,1:31:0.66:1,0,9	0/0:6,3:7:0:0,0,0	./.	1/1:21,0:20:4.71:48,5,0	0/0:16,0:16:33.10:0,33,590	1/1:14,1:13:18.17:127,18,0	1/1:8,0:8:14.74:79,15,0	0/1:14,0:14:6.53:10,0,7
chr10	108953172	.	CTG	C	1041.88	PASS	AB=0.843;AC=25;AF=0.446;AN=56;BaseQRankSum=10.537;DP=490;FS=0.550;HRun=0;HaplotypeScore=112.9588;InbreedingCoeff=0.3826;MQ=55.01;MQ0=12;MQRankSum=-2.893;QD=3.87;ReadPosRankSum=-0.753;VQSLOD=2.6940;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,3:25:7.86:48,8,0	0/0:9,0:9:27.01:0,27,419	0/0:15,0:7:8.85:0,9,121	0/0:41,0:21:37.53:0,38,446	0/0:19,0:19:27.01:0,27,435	0/0:20,0:20:54.19:0,54,1011	0/0:26,0:26:75.21:0,75,1308	0/1:22,1:14:31.51:121,0,32	0/0:22,0:22:63.20:0,63,1131	0/0:15,0:15:45.12:0,45,732	0/0:15,0:15:21.07:0,21,372	0/1:16,5:20:10.13:28,0,10	0/1:10,4:12:19.23:111,0,19	0/1:11,9:17:11.79:31,0,12	0/1:10,3:12:8.50:8,0,15	0/0:12,0:12:33.09:0,33,558	1/1:11,5:15:13.78:94,14,0	1/1:5,1:6:7.73:62,8,0	1/1:13,5:17:23.68:282,24,0	0/0:11,0:10:2.95:0,3,19	0/1:27,3:30:9.72:15,0,10	1/1:15,1:13:3.03:77,3,0	1/1:3,1:4:2.99:24,3,0	1/1:18,4:21:7.77:56,8,0	0/0:16,0:16:39.08:0,39,684	1/1:12,2:12:15.06:114,15,0	1/1:5,1:6:3.91:76,4,0	0/1:17,1:18:21.56:83,0,22
chr10	108953178	.	CTG	C	1136.40	PASS	AB=0.864;AC=25;AF=0.446;AN=56;BaseQRankSum=10.547;DP=500;FS=0.000;HRun=0;HaplotypeScore=118.0291;InbreedingCoeff=0.4202;MQ=57.13;MQ0=12;MQRankSum=-3.146;QD=3.99;ReadPosRankSum=-2.153;VQSLOD=2.0780;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,2:24:4.96:33,5,0	0/0:6,0:6:18.02:0,18,258	0/0:21,0:10:13.55:0,14,193	0/0:34,0:22:11.30:0,11,412	0/0:17,0:17:27.06:0,27,441	0/0:18,0:18:48.16:0,48,896	0/0:27,0:27:78.20:0,78,1343	0/1:22,0:11:26.93:27,0,58	0/0:21,0:21:60.15:0,60,1060	0/0:17,0:17:51.08:0,51,831	0/0:14,0:14:21:0,21,325	0/1:16,5:20:7.19:49,0,7	0/1:11,4:13:19.12:111,0,19	0/1:12,8:17:12.83:31,0,13	0/1:14,2:15:12.29:29,0,12	0/0:12,0:12:33.10:0,33,591	1/1:12,4:15:13.82:95,14,0	1/1:9,0:9:18.99:114,19,0	1/1:15,4:17:22.57:269,23,0	0/0:10,0:9:2.97:0,3,20	0/1:29,4:32:6.58:36,0,7	1/1:15,1:13:4.11:82,4,0	1/1:5,1:6:8.99:74,9,0	1/1:19,4:23:8.48:55,8,0	0/0:17,0:17:39.11:0,39,697	1/1:12,2:12:17.67:103,18,0	1/1:5,3:8:5.88:95,6,0	0/1:19,1:20:15.52:126,0,16
chr10	108953367	.	A	ACC	128.73	PASS	AB=0.904;AC=16;AF=0.320;AN=50;BaseQRankSum=0.480;DP=219;FS=4.912;HRun=0;HaplotypeScore=16.4927;InbreedingCoeff=0.2958;MQ=27.10;MQ0=85;MQRankSum=-3.267;QD=1.72;ReadPosRankSum=4.020;VQSLOD=0.3689;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:3:0.47:0,0,1	0/0:1,0:1:3.01:0,3,38	./.	0/0:35,0:2:0.47:0,0,1	0/0:8,0:7:15.94:0,16,204	0/0:11,0:10:24.08:0,24,339	0/0:11,0:5:5.76:0,6,79	1/1:5,2:2:2.98:21,3,0	0/0:3,0:3:3.01:0,3,34	0/0:4,0:3:9.03:0,9,125	0/0:10,0:9:12.04:0,12,165	0/0:2,0:2:3.46:0,3,25	0/0:2,0:1:0:0,0,0	./.	1/1:1,0:1:2.97:20,3,0	0/0:4,0:4:8.90:0,9,120	0/1:15,1:7:31.59:32,0,41	0/0:9,0:4:9.02:0,9,104	0/1:7,1:6:30.86:53,0,31	1/1:3,2:2:6.02:81,6,0	0/0:6,1:1:0:0,0,0	0/1:5,0:3:21.50:21,0,31	1/1:4,0:1:2.90:16,3,0	1/1:7,0:3:2.30:9,2,0	0/0:11,0:7:12.04:0,12,166	./.	1/1:6,0:1:2.04:6,2,0	0/1:14,0:3:0.09:0,0,3
chr10	108953510	.	C	CA	368.71	PASS	AB=0.818;AC=19;AF=0.500;AN=38;BaseQRankSum=0.894;DP=217;FS=0.000;HRun=15;HaplotypeScore=19.4232;InbreedingCoeff=0.2178;MQ=27.58;MQ0=59;MQRankSum=-0.419;QD=5.85;ReadPosRankSum=-2.710;VQSLOD=0.0420;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,4:5:11.83:90,12,0	0/0:2,0:2:2.84:0,3,14	0/0:55,0:5:2.91:0,3,18	0/0:64,0:6:2.79:0,3,17	0/1:4,3:7:16.33:16,0,27	./.	./.	1/1:1,2:1:3:25,3,0	./.	0/0:8,0:5:8.82:0,9,54	0/1:3,1:4:16.30:16,0,27	./.	0/0:1,0:1:1.82:0,2,5	0/1:1,0:1:0:0,0,0	./.	0/0:1,0:1:2.92:0,3,17	1/1:5,7:10:17.70:125,18,0	1/1:2,2:3:6.36:39,6,0	0/1:3,2:3:9:41,0,9	0/0:1,0:1:2.94:0,3,18	./.	1/1:2,0:1:2.84:14,3,0	./.	./.	0/1:6,1:5:9.15:9,0,12	1/1:2,6:5:8.92:68,9,0	./.	1/1:0,2:2:5.99:50,6,0
chr10	108956146	.	C	CTTAT	2861.79	PASS	AB=0.813;AC=19;AF=0.396;AN=48;BaseQRankSum=-0.942;DP=311;FS=0.000;HRun=0;HaplotypeScore=58.9913;InbreedingCoeff=0.6438;MQ=73.84;MQ0=1;MQRankSum=1.254;QD=15.30;ReadPosRankSum=-1.576;VQSLOD=2.2904;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,9:18:24.08:562,24,0	0/0:6,0:6:9.03:0,9,139	./.	./.	0/0:4,0:4:9.03:0,9,139	0/0:10,0:10:15.05:0,15,230	./.	1/1:27,0:27:15.01:199,15,0	0/0:7,0:7:15.05:0,15,230	0/0:15,0:15:3.01:0,3,46	0/0:4,0:4:6.02:0,6,90	0/0:3,0:3:3.01:0,3,46	0/0:6,0:6:6.02:0,6,92	0/0:6,0:6:3:0,3,25	0/0:6,0:6:6.02:0,6,92	0/0:10,0:10:12.04:0,12,179	1/1:12,14:27:24.08:562,24,0	1/1:16,12:29:24.08:562,24,0	1/1:17,1:20:9.03:170,9,0	0/1:10,3:13:12.73:199,0,13	1/1:10,2:12:6.02:141,6,0	./.	0/0:5,0:5:3.01:0,3,46	0/0:6,0:6:6.02:0,6,92	0/0:10,0:10:9.03:0,9,138	1/1:1,3:5:12.02:235,12,0	1/1:9,6:16:6.02:127,6,0	1/1:15,5:20:12.04:281,12,0
chr10	108956646	.	TC	T	3173.88	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.836;DP=747;FS=0.870;HRun=2;HaplotypeScore=75.1461;InbreedingCoeff=0.9992;MQ=89.45;MQ0=0;MQRankSum=-0.856;QD=32.06;ReadPosRankSum=0.871;VQSLOD=3.4206;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,181,2674	0/0:9,0:9:24.08:0,24,359	0/0:33,0:33:96.28:0,96,1396	0/0:23,0:23:60.17:0,60,850	1/1:0,11:11:33.11:428,33,0	1/1:0,26:26:75.24:974,75,0	1/1:0,22:22:48.16:623,48,0	0/0:34,0:34:99:0,102,1510	1/1:0,24:24:60.08:779,60,0	0/0:34,0:34:99:0,102,1507	0/0:31,0:31:93.28:0,93,1335	0/0:26,0:26:75.25:0,75,1124	0/0:19,0:19:57.18:0,57,830	0/0:20,0:20:60.20:0,60,899	0/0:30,0:30:90.28:0,90,1309	0/0:26,0:26:78.26:0,78,1151	0/0:37,0:37:99:0,108,1533	0/0:19,0:19:57.19:0,57,842	0/0:25,0:25:75.02:0,75,1051	0/0:26,0:26:72.24:0,72,1079	0/0:46,0:46:99:0,135,1983	0/0:29,0:29:84.25:0,84,1199	0/0:23,0:23:63.21:0,63,943	0/0:24,0:24:72.24:0,72,1079	1/1:0,16:16:42.14:545,42,0	0/0:35,0:35:99:0,105,1573	0/0:28,0:28:84.28:0,84,1259	0/0:9,0:9:27.09:0,27,405
chr10	108959307	.	G	GTTAC	22757.72	PASS	AB=0.541;AC=33;AF=0.589;AN=56;BaseQRankSum=9.097;DP=637;FS=7.340;HRun=0;HaplotypeScore=116.1034;InbreedingCoeff=0.9257;MQ=85.63;MQ0=2;MQRankSum=-8.270;QD=58.35;ReadPosRankSum=0.985;VQSLOD=6.6291;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,30:36:84.29:2191,84,0	0/0:12,0:12:33.11:0,33,607	0/0:24,0:25:60.18:0,60,1068	0/0:25,0:25:66.23:0,66,1193	0/0:28,0:28:72.25:0,72,1325	0/0:20,0:20:60.17:0,60,1070	0/0:21,0:21:60.18:0,60,1071	1/1:14,18:33:63.19:1516,63,0	0/0:24,0:24:72.23:0,72,1294	0/0:25,0:25:57.20:0,57,1049	0/0:17,0:17:51.17:0,51,938	1/1:4,17:23:57.20:1478,57,0	1/1:4,17:21:48.16:1266,48,0	1/1:2,20:20:54.19:1425,54,0	1/1:1,15:18:39.13:1030,39,0	0/0:25,0:25:72.25:0,72,1320	1/1:4,22:26:63.22:1633,63,0	1/1:5,9:16:27.09:712,27,0	1/1:8,15:24:63.22:1598,63,0	1/1:6,16:22:51.18:1292,51,0	1/1:5,18:23:39.13:1029,39,0	1/1:5,20:25:51.13:1287,51,0	1/1:1,14:16:36.08:889,36,0	1/1:1,25:26:63.22:1662,63,0	0/0:25,0:24:66.23:0,66,1215	0/1:5,27:33:64.49:2146,0,64	1/1:4,12:15:39.13:971,39,0	1/1:0,9:9:24.08:634,24,0
chr10	108959797	.	C	CT	1538.96	PASS	AB=0.789;AC=10;AF=0.179;AN=56;BaseQRankSum=-9.216;DP=371;FS=12.981;HRun=11;HaplotypeScore=63.1698;InbreedingCoeff=0.5748;MQ=76.43;MQ0=4;MQRankSum=4.659;QD=14.80;ReadPosRankSum=1.219;VQSLOD=3.0552;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:12.43:0,12,33	0/0:10,0:10:26.85:0,27,201	0/0:31,0:18:3.50:0,3,54	0/1:19,1:13:13.48:29,0,13	1/1:5,14:19:9.85:281,10,0	1/1:0,17:17:51.10:518,51,0	0/1:4,6:10:8.04:107,0,8	0/0:25,0:24:24.44:0,24,80	1/1:4,12:16:30.06:305,30,0	0/0:22,0:22:53.78:0,54,417	0/0:16,1:17:5.40:0,5,225	0/0:2,0:2:1.55:0,2,4	0/0:5,0:5:6.22:0,6,16	0/0:8,0:8:10.14:0,10,27	0/0:9,0:9:12.42:0,12,31	0/0:11,0:12:25.93:0,26,189	0/0:18,0:17:12.26:0,12,45	0/0:11,0:11:10.87:0,11,26	0/0:9,0:9:12.47:0,12,49	0/0:12,0:12:13.98:0,14,35	0/0:3,0:3:3.11:0,3,9	0/0:10,0:10:9.32:0,9,23	0/0:5,0:5:7.65:0,8,33	0/0:3,0:3:3.11:0,3,8	1/1:6,16:22:27.86:460,28,0	0/0:17,0:17:22.12:0,22,73	0/0:13,0:13:13.80:0,14,46	0/0:12,0:12:17.58:0,18,44
chr10	108959808	.	TA	T	3912.32	PASS	AB=0.560;AC=33;AF=0.589;AN=56;BaseQRankSum=1.032;DP=315;FS=15.917;HRun=3;HaplotypeScore=45.5270;InbreedingCoeff=0.8782;MQ=67.10;MQ0=6;MQRankSum=-7.405;QD=29.87;ReadPosRankSum=-1.480;VQSLOD=1.4727;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:24.07:288,24,0	0/0:9,0:9:27.08:0,27,345	0/0:26,0:10:23.69:0,24,223	0/0:15,0:9:9.90:0,10,92	0/0:17,0:17:41.91:0,42,370	0/0:19,0:19:56.81:0,57,448	0/0:11,0:11:23.97:0,24,213	1/1:2,14:15:36.11:440,36,0	0/0:12,0:12:29.89:0,30,232	0/0:23,0:23:69.16:0,69,818	0/0:18,0:18:45.09:0,45,533	1/1:0,1:1:3.01:36,3,0	1/1:0,4:4:12.04:146,12,0	1/1:0,6:6:18.03:205,18,0	1/1:0,8:8:24.07:292,24,0	0/0:10,0:10:25.30:0,25,290	1/1:6,8:13:21.02:236,21,0	1/1:1,7:8:24.04:279,24,0	1/1:1,5:6:17.94:176,18,0	1/1:0,9:9:27.08:329,27,0	1/1:0,2:2:6.02:71,6,0	1/1:0,6:6:18.06:222,18,0	1/1:1,3:4:9.03:111,9,0	1/1:0,3:3:6.02:74,6,0	0/0:22,0:22:52.66:0,53,422	0/1:3,11:14:0.41:381,0,0	1/1:1,9:10:12.26:241,12,0	1/1:1,10:11:33.02:385,33,0
chr10	108959961	.	C	CT	1097.37	PASS	AB=0.889;AC=11;AF=0.229;AN=48;BaseQRankSum=-7.215;DP=185;FS=4.998;HRun=11;HaplotypeScore=28.3819;InbreedingCoeff=0.5240;MQ=76.14;MQ0=0;MQRankSum=4.110;QD=12.61;ReadPosRankSum=3.356;VQSLOD=2.3743;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:44.78:0,45,343	0/0:2,0:2:5.98:0,6,46	0/1:17,0:12:2.52:3,0,33	0/0:10,0:8:2.92:0,3,23	1/1:6,8:14:21.04:213,21,0	1/1:4,20:24:15.84:342,16,0	0/1:4,4:8:8.19:107,0,8	0/0:3,0:3:5.96:0,6,44	1/1:0,5:5:15.03:152,15,0	0/0:7,0:7:20.92:0,21,163	0/0:14,0:14:23.87:0,24,181	./.	./.	0/0:1,0:1:2.99:0,3,23	0/0:1,0:1:2.99:0,3,23	0/0:8,0:8:14.94:0,15,116	0/0:7,0:6:14.92:0,15,116	0/0:4,0:4:8.96:0,9,70	0/0:5,0:4:8.94:0,9,68	0/0:1,0:1:2.99:0,3,23	./.	./.	0/1:1,0:1:0:0,0,0	0/0:3,0:3:5.97:0,6,46	1/1:3,15:18:42.08:426,42,0	0/0:6,0:6:14.92:0,15,116	0/0:4,0:4:8.95:0,9,70	0/0:1,0:1:2.68:0,3,11
chr10	108960234	.	T	TG	1286.77	PASS	AB=0.807;AC=41;AF=0.759;AN=54;BaseQRankSum=3.927;DP=368;FS=38.325;HRun=11;HaplotypeScore=91.1506;InbreedingCoeff=0.5137;MQ=63.17;MQ0=1;MQRankSum=-6.563;QD=4.30;ReadPosRankSum=1.653;VQSLOD=-0.5741;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:12:18.65:84,19,0	./.	0/0:21,0:17:36.86:0,37,258	0/0:13,0:12:16.24:0,16,105	0/1:8,5:13:14.24:41,0,14	1/1:8,5:13:6.01:61,6,0	0/1:12,9:21:25.74:112,0,26	1/1:15,0:15:8.39:39,8,0	1/1:6,11:17:15.03:152,15,0	0/0:8,0:9:7.98:0,8,50	0/0:9,0:10:7.99:0,8,52	1/1:15,0:15:17.73:81,18,0	1/1:9,0:10:14.03:66,14,0	1/1:10,0:10:17.30:80,17,0	1/1:8,0:7:2.97:20,3,0	0/0:11,0:11:11.91:0,12,92	1/1:17,0:17:27.72:128,28,0	1/1:14,0:15:28.02:132,28,0	0/1:9,0:9:5.45:7,0,5	1/1:9,0:10:7.15:38,7,0	1/1:21,0:21:8.39:39,8,0	1/1:12,0:12:15.71:76,16,0	1/1:10,0:10:0.55:9,1,0	1/1:31,0:31:29.06:132,29,0	1/1:3,2:5:3:30,3,0	1/1:16,0:17:8.39:40,8,0	1/1:11,0:11:13.36:61,13,0	1/1:5,0:5:5.60:26,6,0
chr10	108960235	.	G	GGGGGT	7532.80	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-0.413;DP=385;FS=34.539;HRun=0;HaplotypeScore=94.7036;InbreedingCoeff=0.8368;MQ=62.61;MQ0=1;MQRankSum=-8.188;QD=31.26;ReadPosRankSum=2.175;VQSLOD=2.5666;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,8:14:24.07:558,24,0	0/0:2,0:2:3:0,3,27	0/0:23,0:17:47.59:0,48,603	0/0:14,0:12:20.51:0,21,265	0/0:13,0:13:11.95:0,12,129	0/0:13,0:13:8.96:0,9,76	0/0:23,0:23:35.99:0,36,388	1/1:9,7:19:21.01:408,21,0	0/0:16,0:16:17.83:0,18,154	0/0:9,0:9:12.03:0,12,192	0/0:10,0:10:18.02:0,18,242	1/1:2,12:14:20.04:571,20,0	1/1:5,7:13:18.06:461,18,0	1/1:6,4:11:0.47:440,0,0	0/0:6,0:5:2.96:0,3,19	0/0:9,0:9:21.04:0,21,323	1/1:6,13:21:39.09:978,39,0	1/1:2,13:16:30.09:849,30,0	1/1:5,4:8:17.98:331,18,0	1/1:7,1:9:14.99:244,15,0	1/1:8,12:24:11.95:276,12,0	1/1:1,8:10:18.06:455,18,0	1/1:6,5:11:8.10:193,8,0	1/1:7,22:37:35.97:912,36,0	0/0:6,0:6:2.82:0,3,21	1/1:9,5:14:14.82:289,15,0	1/1:2,9:12:15.01:362,15,0	1/1:2,2:4:9.03:207,9,0
chr10	108960236	.	G	GGGGT	4628.59	PASS	AB=0.973;AC=27;AF=0.482;AN=56;BaseQRankSum=4.946;DP=376;FS=33.733;HRun=0;HaplotypeScore=98.6161;InbreedingCoeff=0.5136;MQ=62.86;MQ0=1;MQRankSum=-8.725;QD=20.04;ReadPosRankSum=4.803;VQSLOD=2.7068;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,2:14:1.99:393,2,0	0/0:2,0:2:3:0,3,27	0/0:23,0:17:47.65:0,48,609	0/0:14,0:12:25.93:0,26,301	0/0:13,0:13:11.92:0,12,117	0/0:13,0:13:8.93:0,9,64	0/0:23,0:23:47.83:0,48,446	0/1:18,1:19:25.01:275,0,25	0/0:16,0:16:17.42:0,17,126	0/0:9,0:9:12.03:0,12,177	0/0:10,0:10:18.02:0,18,225	0/1:11,0:11:2.87:329,0,3	1/1:10,0:10:17.08:264,17,0	0/1:10,1:11:5.75:299,0,6	0/0:7,0:6:2.79:0,3,18	0/0:9,0:9:24.04:0,24,328	1/1:20,0:20:14.47:542,14,0	1/1:17,0:17:30.07:517,30,0	1/1:11,0:10:5.03:179,5,0	1/1:9,1:10:3.19:170,3,0	0/1:23,0:23:8.46:161,0,8	1/1:9,0:9:18.04:291,18,0	1/1:11,0:11:8.08:109,8,0	1/1:36,0:36:35.81:563,36,0	0/0:6,0:6:2.50:0,3,17	0/1:13,0:13:7.26:172,0,7	1/1:11,0:10:15.05:256,15,0	1/1:3,0:3:7.27:108,7,0
chr10	108962704	.	T	TG	1623.30	PASS	AB=0.837;AC=13;AF=0.232;AN=56;BaseQRankSum=19.889;DP=895;FS=219.275;HRun=1;HaplotypeScore=376.6463;InbreedingCoeff=-0.3005;MQ=42.65;MQ0=6;MQRankSum=-15.105;QD=3.10;ReadPosRankSum=3.558;VQSLOD=-0.6444;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:41.75:0,42,541	0/1:14,3:18:32.36:32,0,375	0/0:26,0:25:63.70:0,64,971	0/0:13,0:12:36.10:0,36,461	0/1:24,6:34:99:177,0,275	0/1:31,3:34:33.54:34,0,731	0/0:15,2:17:18.50:0,18,482	0/0:42,0:42:55.89:0,56,1197	0/0:34,1:35:86.75:0,87,1122	0/1:56,10:68:99:156,0,1573	0/1:28,4:36:99:156,0,561	0/0:36,1:36:98.33:0,98,1185	0/0:24,0:24:19.68:0,20,608	0/1:27,4:30:9.31:9,0,632	0/0:52,1:53:99:0,113,1433	0/0:25,3:28:17.17:0,17,679	0/0:11,0:11:32.97:0,33,377	0/0:11,0:11:33.07:0,33,439	0/0:23,0:23:40.01:0,40,871	0/1:54,6:62:99:189,0,1306	0/0:18,0:18:51.12:0,51,675	0/1:35,17:58:99:350,0,611	0/1:28,15:45:99:453,0,675	0/0:16,0:16:39.24:0,39,352	0/1:32,4:39:30.28:30,0,743	0/1:31,1:33:76.15:76,0,792	0/1:39,3:41:42.17:42,0,1031	0/1:15,3:21:72.64:73,0,428
chr10	108962705	.	T	TA	2066.95	PASS	AB=0.791;AC=16;AF=0.286;AN=56;BaseQRankSum=18.078;DP=891;FS=196.943;HRun=0;HaplotypeScore=382.4260;InbreedingCoeff=-0.4001;MQ=42.44;MQ0=6;MQRankSum=-14.145;QD=3.49;ReadPosRankSum=3.309;VQSLOD=-0.0154;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:39.98:0,40,520	0/1:12,2:18:40.02:40,0,380	0/0:25,0:24:60.90:0,61,945	0/0:12,0:11:33.07:0,33,421	0/1:17,8:34:99:300,0,207	0/1:26,4:33:83.29:83,0,693	0/1:15,1:17:26.22:26,0,462	0/0:39,1:40:73.72:0,74,1221	0/0:35,0:35:70.16:0,70,1091	0/1:49,8:68:99:170,0,1528	0/1:23,3:36:82.92:83,0,479	0/0:37,0:36:76.81:0,77,1148	0/1:22,3:25:53.80:54,0,589	0/1:28,3:30:99:133,0,631	0/0:49,3:52:39.51:0,40,1358	0/1:27,1:28:34.07:34,0,664	0/0:11,0:11:32.98:0,33,378	0/0:11,0:11:33.07:0,33,437	0/0:23,0:23:31.95:0,32,830	0/1:43,8:62:99:211,0,1274	0/0:18,0:18:54.07:0,54,691	0/1:28,9:58:99:419,0,652	0/1:27,4:45:99:341,0,674	0/0:16,0:16:24.43:0,24,255	0/1:27,5:40:54.65:55,0,759	0/1:25,4:32:66.55:67,0,784	0/1:33,6:41:99:136,0,1031	0/1:13,3:22:74.23:74,0,427
chr10	108967202	.	G	GTA	2668.35	PASS	AB=0.848;AC=11;AF=0.196;AN=56;BaseQRankSum=10.180;DP=632;FS=84.234;HRun=0;HaplotypeScore=286.9856;InbreedingCoeff=-0.2622;MQ=35.71;MQ0=0;MQRankSum=-8.935;QD=7.10;ReadPosRankSum=-0.115;VQSLOD=0.0763;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:51.04:0,51,719	0/1:8,7:17:99:356,0,199	0/0:12,0:10:28.63:0,29,366	0/0:20,0:14:42.10:0,42,589	0/1:25,18:56:99:248,0,479	0/1:18,1:20:18.46:18,0,472	0/0:19,0:23:61.44:0,61,700	0/0:39,0:39:99:0,106,1343	0/0:28,1:34:73.93:0,74,916	0/1:35,9:51:99:467,0,853	0/1:31,10:48:99:407,0,575	0/0:3,0:3:9.03:0,9,136	0/0:4,0:4:12.04:0,12,181	0/0:6,0:6:12.04:0,12,181	0/0:2,0:2:6.02:0,6,91	0/0:18,0:21:45.81:0,46,614	0/1:8,1:9:45.28:45,0,164	0/0:11,0:11:24.05:0,24,342	0/0:14,0:14:37.85:0,38,536	0/1:37,8:49:99:417,0,819	0/0:19,0:19:47.98:0,48,626	0/0:7,0:8:20.74:0,21,283	0/0:7,0:8:23.75:0,24,314	0/0:6,0:6:6.02:0,6,91	0/1:22,7:32:99:337,0,345	0/1:32,6:46:99:317,0,974	0/1:24,4:34:99:127,0,759	0/1:7,2:13:75.64:76,0,215
chr10	108967211	.	T	TA	1410.50	PASS	AB=0.865;AC=10;AF=0.179;AN=56;BaseQRankSum=12.551;DP=727;FS=142.809;HRun=1;HaplotypeScore=317.2688;InbreedingCoeff=-0.2273;MQ=39.36;MQ0=0;MQRankSum=-10.750;QD=3.87;ReadPosRankSum=3.825;VQSLOD=0.3928;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:56.34:0,56,750	0/1:14,9:24:99:266,0,301	0/0:20,0:16:23.89:0,24,451	0/0:25,0:18:55.42:0,55,695	0/0:44,16:61:20.65:0,21,543	0/1:19,1:20:4.64:5,0,532	0/0:32,0:32:38.04:0,38,650	0/0:44,0:43:96:0,96,1368	0/0:39,1:40:60.90:0,61,905	0/1:47,13:61:99:475,0,1032	0/1:30,12:48:71.91:72,0,440	0/0:3,0:3:9.03:0,9,117	0/0:4,0:4:12.04:0,12,156	0/0:6,0:6:15.05:0,15,194	0/0:2,0:2:6.02:0,6,78	0/0:24,0:24:45.78:0,46,517	0/1:11,1:11:26.99:27,0,144	0/0:13,0:13:39.13:0,39,505	0/0:17,0:16:45.35:0,45,520	0/1:41,8:52:40.64:41,0,703	0/0:22,0:22:34.16:0,34,431	0/0:8,0:8:7.99:0,8,220	0/0:9,0:9:11.64:0,12,224	0/0:6,0:6:18.06:0,18,233	0/1:23,7:38:99:260,0,407	0/1:41,8:51:99:283,0,987	0/1:40,4:43:50.26:50,0,705	0/1:12,1:13:73.26:73,0,95
chr10	108967215	.	T	TG	1678.35	PASS	AB=0.867;AC=11;AF=0.196;AN=56;BaseQRankSum=12.554;DP=767;FS=143.292;HRun=1;HaplotypeScore=316.8593;InbreedingCoeff=-0.2566;MQ=40.10;MQ0=1;MQRankSum=-10.861;QD=4.25;ReadPosRankSum=4.064;VQSLOD=0.4776;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:28:62.93:0,63,769	0/1:12,12:25:99:481,0,271	0/0:25,0:19:33.92:0,34,601	0/0:30,0:23:61.38:0,61,733	0/0:42,18:60:40.53:0,41,548	0/1:20,1:21:9.13:9,0,531	0/0:31,0:34:41.92:0,42,692	0/0:46,0:47:93.28:0,93,1359	0/1:41,2:43:50.06:50,0,811	0/1:51,17:68:99:572,0,1193	0/1:37,13:51:38.08:38,0,519	0/0:3,0:3:9.03:0,9,117	0/0:5,0:5:12.04:0,12,156	0/0:6,0:6:15.05:0,15,194	0/0:2,0:2:6.02:0,6,78	0/1:23,0:23:26.36:26,0,443	0/1:10,1:11:27.97:28,0,144	0/0:14,0:14:42.14:0,42,545	0/0:15,0:15:26.20:0,26,415	0/0:45,9:54:31.90:0,32,917	0/0:23,0:23:35.92:0,36,467	0/0:8,0:8:7.94:0,8,220	0/0:9,0:9:11.64:0,12,224	0/0:6,0:6:18.06:0,18,233	0/1:30,10:40:99:323,0,426	0/1:47,8:55:99:253,0,1004	0/1:37,5:44:11.09:11,0,725	0/1:10,1:11:31.87:32,0,107
chr10	108967219	.	TA	T	144.03	PASS	AB=0.879;AC=9;AF=0.161;AN=56;BaseQRankSum=13.991;DP=765;FS=124.764;HRun=1;HaplotypeScore=295.1586;InbreedingCoeff=-0.2025;MQ=41.74;MQ0=1;MQRankSum=-11.279;QD=0.42;ReadPosRankSum=4.457;VQSLOD=0.0951;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:60.47:0,60,958	0/0:23,2:25:29.87:0,30,648	0/0:26,1:20:51.40:0,51,801	0/0:34,0:26:71.28:0,71,1066	0/1:48,13:61:29.17:29,0,670	0/0:21,1:22:36.09:0,36,721	0/0:28,4:32:29.20:0,29,915	0/1:48,1:48:22.16:22,0,1626	0/0:39,5:44:11.53:0,12,1191	0/0:65,7:72:50.99:0,51,2249	0/1:41,7:48:43.37:43,0,646	0/0:3,0:3:9.03:0,9,143	0/0:5,0:5:12.04:0,12,191	0/0:6,0:6:15.05:0,15,239	0/0:2,0:2:6.02:0,6,96	0/1:20,3:23:5.96:6,0,572	0/0:11,1:11:18.40:0,18,287	0/0:14,0:14:42.14:0,42,671	0/1:13,0:11:21.19:21,0,373	0/0:49,3:52:26.35:0,26,1132	0/0:23,0:23:36.89:0,37,577	0/0:7,1:8:18.53:0,19,287	0/0:8,1:9:4.05:0,4,270	0/0:6,0:6:18.06:0,18,287	0/1:37,3:40:7.54:8,0,646	0/1:48,8:56:34.16:34,0,1526	0/1:36,6:41:53.19:53,0,907	0/1:4,4:8:62.47:62,0,141
chr10	108967222	.	G	GT	131.75	PASS	AB=0.814;AC=5;AF=0.089;AN=56;BaseQRankSum=13.734;DP=757;FS=131.627;HRun=1;HaplotypeScore=292.7577;InbreedingCoeff=-0.1055;MQ=44.27;MQ0=1;MQRankSum=-11.191;QD=0.66;ReadPosRankSum=5.856;VQSLOD=-0.3845;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:67.14:0,67,903	0/0:22,3:25:5.27:0,5,560	0/0:26,0:21:62.73:0,63,766	0/0:34,0:26:72.20:0,72,946	0/0:48,13:61:19.73:0,20,582	0/0:20,1:21:42.05:0,42,676	0/0:27,4:31:45.76:0,46,792	0/0:46,1:46:98.37:0,98,1411	0/0:40,5:45:58.45:0,58,1094	0/0:60,8:70:44.33:0,44,1625	0/1:34,11:45:60.53:61,0,541	0/0:3,0:3:9.03:0,9,126	0/0:5,0:5:12.04:0,12,167	0/0:6,0:6:15.05:0,15,209	0/0:2,0:2:6.02:0,6,84	0/0:17,3:20:25.39:0,25,545	0/0:11,1:11:22.61:0,23,279	0/0:15,0:15:39.13:0,39,545	0/0:14,0:12:17.59:0,18,402	0/1:43,6:49:9.28:9,0,1026	0/0:25,0:25:41.29:0,41,534	0/0:7,1:8:7.99:0,8,238	0/0:8,1:9:10.15:0,10,241	0/0:6,0:6:18.06:0,18,251	0/1:30,9:39:99:152,0,553	0/1:46,10:56:1.30:1,0,1252	0/0:33,6:39:19.48:0,19,769	0/1:6,4:10:13.65:14,0,159
chr10	108967223	.	A	AT	1788.95	PASS	AB=0.889;AC=15;AF=0.268;AN=56;BaseQRankSum=14.582;DP=765;FS=171.660;HRun=0;HaplotypeScore=291.3914;InbreedingCoeff=-0.3978;MQ=44.23;MQ0=1;MQRankSum=-12.126;QD=3.14;ReadPosRankSum=4.763;VQSLOD=0.0833;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:63.66:0,64,862	0/1:23,2:25:59.94:60,0,520	0/0:28,0:21:56.79:0,57,757	0/0:34,0:26:72.14:0,72,945	0/1:48,13:61:99:190,0,539	0/0:21,1:22:22.07:0,22,657	0/1:27,4:31:36.84:37,0,729	0/1:51,1:52:99:141,0,1264	0/1:40,5:45:77.56:78,0,1060	0/1:66,7:72:99:136,0,1653	0/1:39,7:46:99:262,0,517	0/0:3,0:3:9.03:0,9,126	0/0:5,0:5:12.04:0,12,167	0/0:6,0:6:15.05:0,15,209	0/0:2,0:2:6.02:0,6,84	0/1:18,3:21:64.52:65,0,534	0/0:11,1:11:1.79:0,2,253	0/0:15,0:15:39.13:0,39,545	0/1:13,1:12:41.15:41,0,383	0/1:46,3:49:99:137,0,1020	0/0:24,0:24:42.06:0,42,569	0/0:7,1:8:7.88:0,8,238	0/1:8,1:9:16.01:16,0,230	0/0:6,0:6:18.06:0,18,251	0/1:36,3:39:99:261,0,589	0/1:47,8:55:99:216,0,1303	0/1:34,6:39:99:177,0,752	0/1:6,4:10:99:128,0,194
chr10	108967228	.	GGT	G	1087.72	PASS	AB=0.816;AC=6;AF=0.107;AN=56;BaseQRankSum=9.232;DP=785;FS=85.236;HRun=0;HaplotypeScore=295.1431;InbreedingCoeff=-0.1177;MQ=45.20;MQ0=1;MQRankSum=-9.479;QD=4.25;ReadPosRankSum=2.590;VQSLOD=-0.4150;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:72.24:0,72,1198	0/1:16,10:26:99:347,0,437	0/0:32,0:26:44.96:0,45,1080	0/0:37,0:29:58.89:0,59,1038	0/0:40,16:56:69.26:0,69,991	0/0:22,1:23:53.83:0,54,891	0/0:29,1:30:67.24:0,67,1134	0/0:54,1:55:99:0,120,2100	0/0:43,1:44:99:0,108,1778	0/1:62,15:76:99:444,0,2267	0/1:34,14:48:0.84:1,0,893	0/0:3,0:3:9.03:0,9,156	0/0:5,0:5:15.05:0,15,250	0/0:6,0:6:15.05:0,15,269	0/0:2,0:2:6.02:0,6,108	0/0:23,0:23:56.87:0,57,870	0/0:12,0:12:25.63:0,26,403	0/0:16,0:16:48.16:0,48,833	0/0:14,0:12:22.49:0,22,479	0/0:38,9:47:41.54:0,42,1426	0/0:27,0:27:48.13:0,48,853	0/0:8,0:8:20.90:0,21,334	0/0:10,0:10:20.86:0,21,332	0/0:6,0:6:18.06:0,18,323	0/1:28,11:39:99:216,0,781	0/1:48,8:56:99:184,0,1745	0/0:39,2:40:82.17:0,82,1288	0/1:9,1:10:11.88:12,0,320
chr10	108968415	.	CT	C	1080.07	PASS	AB=0.779;AC=23;AF=0.411;AN=56;BaseQRankSum=4.891;DP=330;FS=1.093;HRun=13;HaplotypeScore=42.0319;InbreedingCoeff=0.4085;MQ=72.23;MQ0=2;MQRankSum=3.263;QD=8.00;ReadPosRankSum=2.513;VQSLOD=1.8544;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,3:32:50.88:0,51,627	0/0:3,0:3:9.01:0,9,88	0/0:19,0:10:5.96:0,6,43	0/0:9,0:4:3.37:0,3,10	1/1:3,10:14:2.65:172,3,0	1/1:2,12:16:30.89:209,31,0	1/1:0,2:3:8:50,8,0	0/0:19,0:20:32.89:0,33,306	1/1:3,5:8:11.92:88,12,0	0/0:15,1:20:23.14:0,23,343	0/0:9,0:9:14.98:0,15,136	1/1:1,6:7:20.88:153,21,0	0/1:1,2:3:20.22:35,0,20	0/1:4,6:10:34.51:107,0,35	1/1:1,3:4:5.96:44,6,0	0/0:3,0:3:6.01:0,6,58	0/0:21,0:24:62.76:0,63,577	0/1:11,3:15:26.82:27,0,237	0/1:13,2:16:1.88:2,0,293	0/0:17,0:16:33.03:0,33,311	0/1:7,1:8:6.90:7,0,97	0/0:2,0:2:0:0,0,0	1/1:1,7:8:20.88:153,21,0	0/1:3,3:8:13.17:61,0,13	1/1:1,10:11:20.87:153,21,0	0/0:20,0:23:37.32:0,37,452	0/0:14,0:14:18.47:0,18,168	0/1:4,0:4:3.93:4,0,76
chr10	108969846	.	T	TCAACCATC	2406.89	PASS	AB=0.778;AC=22;AF=0.393;AN=56;BaseQRankSum=-0.065;DP=257;FS=20.853;HRun=0;HaplotypeScore=56.3901;InbreedingCoeff=0.6484;MQ=76.48;MQ0=7;MQRankSum=-2.716;QD=23.14;ReadPosRankSum=1.770;VQSLOD=1.2492;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:29.98:0,30,593	0/0:1,0:1:3.01:0,3,53	0/0:26,0:16:34.38:0,34,375	0/0:23,0:16:19.74:0,20,280	1/1:4,0:4:6:79,6,0	1/1:2,6:11:8.77:278,9,0	0/1:1,4:5:11.87:68,0,12	0/0:20,0:20:50.44:0,50,918	1/1:11,0:8:18.03:256,18,0	0/0:7,0:6:18.05:0,18,330	0/0:3,0:3:5.98:0,6,105	1/1:1,6:8:3.01:133,3,0	1/1:1,14:15:9.03:396,9,0	1/1:1,4:7:6.02:222,6,0	1/1:9,0:8:24.02:429,24,0	0/0:7,0:7:20.79:0,21,458	0/0:9,0:8:21.01:0,21,244	0/0:2,0:2:6.02:0,6,154	0/0:7,0:6:17.68:0,18,199	0/0:10,0:10:29.95:0,30,437	0/0:11,0:11:33.07:0,33,725	1/1:1,7:9:6.02:145,6,0	1/1:0,7:7:6.02:265,6,0	1/1:1,5:7:5.93:149,6,0	0/1:11,0:11:17.89:181,0,18	0/0:6,0:6:18.03:0,18,303	0/0:7,0:6:17.87:0,18,135	0/0:1,0:1:3.01:0,3,85
chr10	108969907	.	A	AT	42.68	PASS	AB=0.900;AC=8;AF=0.400;AN=20;BaseQRankSum=2.261;DP=46;FS=6.726;HRun=0;HaplotypeScore=21.8779;InbreedingCoeff=0.2043;MQ=21.75;MQ0=3;MQRankSum=-1.684;QD=2.85;ReadPosRankSum=0.337;VQSLOD=1.0350;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:3,0:1:3.01:0,3,35	./.	./.	./.	./.	./.	./.	./.	1/1:3,2:5:8.39:61,8,0	0/1:3,1:3:29.31:29,0,36	0/1:2,0:2:0.49:0,0,36	0/0:2,0:1:3.01:0,3,42	./.	1/1:2,0:1:1.25:3,1,0	0/0:1,0:1:3.01:0,3,41	./.	./.	0/0:3,0:3:8.52:0,9,93	./.	0/0:2,0:2:2.97:0,3,20	./.	./.	./.	1/1:1,1:1:3.01:37,3,0	./.
chr10	108970377	.	C	CCA	485.29	PASS	AB=0.625;AC=8;AF=0.160;AN=50;BaseQRankSum=-0.110;DP=329;FS=7.210;HRun=0;HaplotypeScore=50.3769;InbreedingCoeff=0.3061;MQ=41.14;MQ0=51;MQRankSum=-2.776;QD=12.44;ReadPosRankSum=2.797;VQSLOD=2.0532;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:20:45.01:0,45,554	./.	0/0:46,0:8:20:0,20,206	0/0:43,0:5:6.57:0,7,55	1/1:6,6:2:3.01:61,3,0	0/1:2,5:6:16.67:227,0,17	./.	0/0:15,0:12:21.05:0,21,271	0/1:6,6:10:35.27:280,0,35	0/0:11,0:4:6.46:0,6,59	0/0:4,0:2:6.02:0,6,87	0/0:7,0:4:3.21:0,3,42	0/0:8,0:4:2.68:0,3,11	1/1:3,0:2:2.94:23,3,0	0/0:10,0:10:7.46:0,7,27	0/0:6,0:6:11.90:0,12,117	0/0:19,0:18:25.06:0,25,383	0/0:11,0:10:24.54:0,25,313	0/0:15,0:11:28.14:0,28,230	0/0:9,0:8:16.26:0,16,178	0/0:12,0:9:26.93:0,27,299	1/1:5,0:2:3.85:12,4,0	0/0:9,0:2:2.62:0,3,16	0/0:9,0:8:5.95:0,6,47	./.	0/0:7,0:5:14.51:0,15,152	0/0:8,0:7:14.43:0,14,187	0/0:7,0:4:3.01:0,3,45
chr10	108971048	.	AC	A	5760.67	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.308;DP=657;FS=5.817;HRun=2;HaplotypeScore=64.5032;InbreedingCoeff=0.9968;MQ=80.98;MQ0=0;MQRankSum=-0.509;QD=35.13;ReadPosRankSum=1.110;VQSLOD=5.1849;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1502	0/0:11,0:11:30.10:0,30,445	0/0:25,0:25:63.19:0,63,972	0/0:11,0:11:30:0,30,374	0/0:22,0:22:60.19:0,60,872	0/0:18,0:18:54.18:0,54,807	0/0:23,0:23:63.21:0,63,943	0/0:30,0:30:87.27:0,87,1249	0/0:22,0:22:66.22:0,66,988	0/0:24,0:24:66.21:0,66,952	0/0:13,0:13:39.13:0,39,584	1/1:0,27:27:72.23:934,72,0	1/1:1,25:26:72.23:931,72,0	1/1:3,16:19:48.16:623,48,0	1/1:0,24:24:69.22:893,69,0	0/0:19,0:19:57.19:0,57,854	0/0:45,0:45:99:0,132,1899	0/0:19,0:19:57.18:0,57,828	0/0:21,0:21:60.19:0,60,877	0/0:13,0:13:39.13:0,39,584	0/0:46,0:46:99:0,132,1935	1/1:0,16:16:42.14:541,42,0	1/1:2,10:12:30.10:389,30,0	1/1:1,39:40:99:1451,114,0	0/0:21,0:21:63.16:0,63,880	0/0:33,0:33:96.31:0,96,1400	0/0:36,0:35:99:0,108,1595	0/0:5,0:5:15.05:0,15,225
chr10	108971866	.	C	CAAA	10632.47	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=6.415;DP=582;FS=0.384;HRun=12;HaplotypeScore=123.2492;InbreedingCoeff=0.8806;MQ=64.36;MQ0=7;MQRankSum=-5.307;QD=27.33;ReadPosRankSum=-5.279;VQSLOD=2.3558;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,16:41:99:1570,101,0	0/0:17,0:20:30.35:0,30,450	0/0:24,0:13:10.94:0,11,107	0/1:18,0:15:15.38:15,0,37	0/0:23,0:25:55.16:0,55,656	0/0:23,0:24:29.27:0,29,555	0/0:14,0:13:24.01:0,24,269	1/1:24,1:25:31.44:466,31,0	0/0:9,0:12:13.36:0,13,156	0/0:16,0:17:44.98:0,45,472	0/0:16,0:18:40.50:0,41,459	1/1:9,2:11:29.82:394,30,0	1/1:12,4:15:27.08:434,27,0	1/1:8,1:9:18.92:233,19,0	1/1:8,7:15:39.10:623,39,0	0/0:11,0:13:13.23:0,13,163	1/1:21,0:37:75.16:721,75,0	1/1:19,5:27:62.97:867,63,0	1/1:14,4:20:41.59:533,42,0	1/1:22,7:28:54.08:800,54,0	1/1:6,0:7:15.40:132,15,0	1/1:9,4:16:29.30:369,29,0	1/1:14,7:25:61.26:846,61,0	1/1:11,2:13:30.07:454,30,0	0/0:26,0:26:56.93:0,57,622	1/1:25,8:33:2.06:930,2,0	1/1:22,3:25:63.11:909,63,0	1/1:5,4:11:24.03:336,24,0
chr10	108971919	.	AT	A	9333.71	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=16.510;DP=527;FS=1.543;HRun=5;HaplotypeScore=88.4976;InbreedingCoeff=0.8875;MQ=69.30;MQ0=1;MQRankSum=-3.128;QD=27.95;ReadPosRankSum=0.240;VQSLOD=4.8516;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,38:43:99:1224,108,0	0/0:13,0:13:30.10:0,30,410	0/0:8,0:8:13.28:0,13,201	0/1:8,0:8:48.96:49,0,143	0/0:24,0:24:72.21:0,72,956	0/0:22,0:22:60.17:0,60,789	0/0:22,0:22:60.20:0,60,819	1/1:2,26:28:78.22:884,78,0	0/0:17,0:17:42.14:0,42,575	0/0:31,0:31:87.29:0,87,1184	0/0:19,0:19:57.19:0,57,780	1/1:1,10:11:30.09:340,30,0	1/1:1,13:14:36.10:408,36,0	1/1:1,9:10:27.08:306,27,0	1/1:2,13:15:36.10:408,36,0	0/0:13,0:13:39.12:0,39,519	1/1:4,20:23:51.14:578,51,0	1/1:2,20:22:54.15:608,54,0	1/1:1,19:20:54.14:604,54,0	1/1:2,19:20:57.16:646,57,0	1/1:0,16:16:42.12:476,42,0	1/1:1,17:18:42.12:476,42,0	1/1:3,16:18:42.12:476,42,0	1/1:2,10:12:27.07:306,27,0	0/0:24,0:24:72.22:0,72,964	1/1:4,19:23:1.41:631,1,0	1/1:3,20:23:63.17:706,63,0	1/1:1,6:7:18.05:204,18,0
chr10	108972236	.	ACGGGCT	A	12706.03	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=9.173;DP=592;FS=1.126;HRun=0;HaplotypeScore=145.9827;InbreedingCoeff=0.9975;MQ=86.96;MQ0=0;MQRankSum=-16.995;QD=53.84;ReadPosRankSum=-1.439;VQSLOD=4.8924;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,40:42:87.30:2133,87,0	0/0:7,0:7:21.07:0,21,769	0/0:24,0:24:69.22:0,69,2221	0/0:26,0:26:72.25:0,72,2388	0/0:19,0:19:57.20:0,57,2021	0/0:19,0:19:57.11:0,57,1987	0/0:31,0:31:93.32:0,93,3327	1/1:4,23:27:69.22:1599,69,0	0/0:26,0:26:69.24:0,69,2453	0/0:26,0:26:76.14:0,76,2660	0/0:8,0:8:24.07:0,24,795	0/0:36,0:36:99:0,108,3774	0/0:20,0:20:60.21:0,60,2192	0/0:12,0:12:36.12:0,36,1258	0/0:17,0:17:51.18:0,51,1862	0/0:11,0:11:33.11:0,33,1176	1/1:2,18:20:39.61:959,40,0	1/1:1,17:18:42.14:997,42,0	1/1:2,17:19:48.15:1084,48,0	1/1:2,9:11:24.08:590,24,0	1/1:2,31:33:51.65:1190,52,0	0/0:18,0:18:48.06:0,48,1663	0/0:16,0:16:39.13:0,39,1426	0/0:25,0:25:75.26:0,75,2746	0/0:15,0:15:45.13:0,45,1504	1/1:2,27:28:78.25:1870,78,0	1/1:2,26:28:75.26:1842,75,0	1/1:1,8:9:18.06:443,18,0
chr10	108972689	.	T	TC	1595.93	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-7.061;DP=204;FS=23.863;HRun=7;HaplotypeScore=24.5362;InbreedingCoeff=0.8566;MQ=68.73;MQ0=0;MQRankSum=-0.444;QD=21.00;ReadPosRankSum=-0.198;VQSLOD=1.5751;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:12:30.09:362,30,0	0/0:5,0:5:12.02:0,12,116	0/0:9,0:8:18.01:0,18,170	0/0:5,0:5:15.02:0,15,143	0/0:8,0:8:18.03:0,18,174	0/0:4,0:4:12.02:0,12,116	0/0:15,0:15:24.01:0,24,232	1/1:3,7:10:21.06:253,21,0	0/0:2,0:2:3:0,3,29	0/0:6,0:6:12.02:0,12,116	0/0:7,0:7:21.02:0,21,196	0/0:9,0:9:20.99:0,21,203	0/0:4,0:4:6:0,6,58	0/0:6,0:6:12:0,12,116	0/0:6,0:6:15.02:0,15,145	0/0:6,0:6:12:0,12,116	1/1:0,6:6:9.03:109,9,0	1/1:1,6:7:18.06:217,18,0	1/1:2,6:8:21.02:237,21,0	1/1:1,7:8:21.05:241,21,0	1/1:3,12:16:15.05:181,15,0	0/0:9,0:9:27.04:0,27,260	0/0:6,0:6:11.79:0,12,110	0/0:8,0:8:17.96:0,18,164	0/0:13,0:13:33.01:0,33,307	1/1:0,3:3:9.03:109,9,0	1/1:1,4:5:5.93:53,6,0	1/1:0,1:1:3.01:36,3,0
chr10	108974240	.	GT	G	4575.11	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=16.187;DP=621;FS=0.755;HRun=2;HaplotypeScore=117.8785;InbreedingCoeff=0.9998;MQ=96.75;MQ0=0;MQRankSum=-3.043;QD=32.68;ReadPosRankSum=3.255;VQSLOD=4.4878;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:99:0,108,1562	0/0:14,0:14:42.14:0,42,629	0/0:31,0:31:89.29:0,89,1235	0/0:31,0:31:58.96:0,59,954	0/0:17,0:17:42.09:0,42,580	0/0:12,0:12:33.11:0,33,494	0/0:26,0:26:78.26:0,78,1169	0/0:22,0:22:66.22:0,66,977	0/0:30,0:30:90.28:0,90,1303	0/0:29,0:29:84.28:0,84,1233	0/0:12,0:12:36.12:0,36,540	1/1:0,20:20:60.14:721,60,0	1/1:0,20:20:57.18:703,57,0	1/1:3,22:25:60.14:722,60,0	1/1:0,23:23:60.15:720,60,0	0/0:19,0:19:54.18:0,54,809	0/0:24,0:24:72.24:0,72,1077	0/0:28,0:28:84.27:0,84,1238	0/0:18,0:18:51.16:0,51,728	0/0:20,0:20:57.17:0,57,811	0/0:26,0:26:78.24:0,78,1129	1/1:0,25:25:72.22:879,72,0	1/1:0,13:13:36.09:427,36,0	1/1:1,13:14:31.77:403,32,0	0/0:22,0:22:66.21:0,66,952	0/0:24,0:24:66.22:0,66,988	0/0:24,0:24:68.89:0,69,979	0/0:16,0:16:48.16:0,48,717
chr10	108974534	.	A	ACACACATAC	1572.71	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-1.324;DP=1034;FS=6.301;HRun=0;HaplotypeScore=302.9437;InbreedingCoeff=0.8896;MQ=52.87;MQ0=11;MQRankSum=-5.492;QD=11.08;ReadPosRankSum=-1.456;VQSLOD=0.7975;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,108,2746	0/0:17,0:17:42.14:0,42,1109	0/0:61,0:35:42.04:0,42,654	0/0:43,0:32:48.12:0,48,936	1/1:5,13:20:2.76:97,3,0	1/1:6,14:20:14.62:512,15,0	1/1:10,23:34:3.01:113,3,0	0/0:44,0:42:66.22:0,66,1526	1/1:8,28:41:20.94:827,21,0	0/0:69,0:69:99:0,163,4061	0/0:19,0:19:36.12:0,36,868	0/0:38,0:38:78.25:0,78,1810	0/0:46,0:46:99:0,108,2629	0/0:30,0:30:66.23:0,66,1704	0/0:41,0:41:90.29:0,90,2238	0/0:46,0:46:90.31:0,90,2367	0/0:36,0:33:67.78:0,68,1802	0/0:19,0:19:39.13:0,39,951	0/0:24,0:22:42.14:0,42,969	0/0:32,0:32:42.10:0,42,927	0/0:85,0:84:99:0,229,5664	0/0:38,0:38:54.18:0,54,1264	0/0:24,0:24:24.08:0,24,575	0/0:43,0:43:84.23:0,84,2021	1/1:5,19:26:8.62:175,9,0	0/0:28,0:28:72.25:0,72,1908	0/0:30,0:30:55.29:0,55,1413	0/0:32,0:32:66.23:0,66,1817
chr10	108974622	.	TAC	T	738.96	PASS	AB=0.861;AC=8;AF=0.143;AN=56;BaseQRankSum=9.839;DP=1210;FS=4.491;HRun=0;HaplotypeScore=258.3846;InbreedingCoeff=-0.1738;MQ=40.38;MQ0=168;MQRankSum=-3.510;QD=1.93;ReadPosRankSum=-2.169;VQSLOD=2.1762;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,9:51:46.56:0,47,1312	0/0:22,0:20:36.12:0,36,609	0/0:48,0:1:3.01:0,3,51	0/0:82,0:1:3.01:0,3,50	0/0:28,0:25:26.54:0,27,459	0/0:36,0:26:24.08:0,24,403	0/0:32,0:19:12.04:0,12,200	0/0:41,2:30:72.19:0,72,1134	0/0:51,0:38:39.13:0,39,646	0/0:92,0:77:99:0,201,3190	0/0:34,0:25:24.26:0,24,405	0/0:37,0:34:29.81:0,30,447	0/0:25,0:22:20.86:0,21,353	0/0:27,0:24:21.07:0,21,354	0/0:36,0:35:32.67:0,33,509	0/0:71,0:67:99:0,135,2288	0/1:29,13:36:99:129,0,773	0/1:31,10:41:99:141,0,1091	0/0:28,2:21:21.22:0,21,931	0/1:30,7:35:99:121,0,934	0/1:99,28:117:17.85:18,0,3048	0/1:20,0:18:0.65:1,0,301	0/1:30,0:24:33.33:33,0,213	0/0:36,0:33:23.64:0,24,380	0/0:20,0:16:21.07:0,21,353	0/1:41,12:44:99:342,0,1359	0/1:27,6:31:83.95:84,0,948	0/0:21,0:19:45.14:0,45,710
chr10	108974644	.	C	CAT	509.68	PASS	AB=0.821;AC=2;AF=0.036;AN=56;BaseQRankSum=6.278;DP=1225;FS=28.250;HRun=0;HaplotypeScore=307.7434;InbreedingCoeff=-0.0373;MQ=42.06;MQ0=98;MQRankSum=-4.829;QD=8.22;ReadPosRankSum=-0.332;VQSLOD=2.1617;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:51:99:0,132,1908	0/0:25,0:23:54.18:0,54,785	0/0:51,0:15:31.52:0,32,618	0/0:62,0:20:47.36:0,47,669	0/0:32,0:29:56.99:0,57,830	0/0:39,0:27:78.25:0,78,1058	0/0:40,0:31:71.52:0,72,1027	0/0:40,0:33:93.21:0,93,1328	0/0:48,0:35:78.26:0,78,1096	0/0:102,1:91:99:0,216,3950	0/0:37,0:28:60.57:0,61,809	0/0:33,0:31:60.18:0,60,812	0/0:26,0:24:41.83:0,42,629	0/0:25,0:22:47.76:0,48,650	0/0:31,0:30:63.01:0,63,841	0/0:68,0:64:99:0,175,2575	0/0:43,0:37:96.29:0,96,1407	0/0:38,0:38:99:0,102,1511	0/0:27,0:22:66.22:0,66,1001	0/0:40,0:38:99:0,102,1511	0/0:118,0:109:99:0,267,3957	0/1:18,8:26:99:345,0,371	0/1:31,5:30:99:253,0,211	0/0:26,0:23:18.06:0,18,246	0/0:28,0:24:59.23:0,59,812	0/0:61,0:54:99:0,156,2353	0/0:40,0:38:99:0,108,1597	0/0:25,0:24:72.24:0,72,1070
chr10	108974709	.	C	CAT	6312.64	PASS	AB=0.812;AC=18;AF=0.321;AN=56;BaseQRankSum=16.869;DP=1182;FS=245.916;HRun=0;HaplotypeScore=405.4600;InbreedingCoeff=-0.3028;MQ=38.42;MQ0=130;MQRankSum=-12.204;QD=8.90;ReadPosRankSum=-5.646;VQSLOD=0.4526;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:42:66.20:0,66,966	0/1:13,9:22:99:338,0,383	0/1:48,0:14:29.53:30,0,192	0/0:50,2:14:36.01:0,36,451	0/1:41,9:41:99:197,0,772	0/0:41,0:30:35:0,35,629	0/0:26,0:15:10.57:0,11,334	0/0:39,0:26:28.11:0,28,798	0/0:45,1:39:87.28:0,87,1305	0/1:97,21:91:99:855,0,2164	0/1:30,10:32:99:270,0,534	1/1:23,9:26:44.60:681,45,0	0/1:26,6:26:99:466,0,112	0/1:15,10:20:11.43:318,0,11	0/1:24,13:30:7.54:715,0,8	0/0:62,0:57:99:0,119,2020	0/0:29,0:26:1.10:0,1,732	0/1:35,0:33:15.47:15,0,940	0/0:25,1:19:11.72:0,12,582	0/1:34,19:49:99:784,0,516	0/0:71,0:66:74.41:0,74,1488	0/1:18,13:29:12.98:420,0,13	0/1:13,14:26:62.73:262,0,63	0/1:13,4:14:13.75:14,0,166	0/1:38,9:36:99:381,0,689	0/1:56,5:45:99:237,0,1227	0/0:33,2:33:16.46:0,16,911	0/1:26,7:32:99:329,0,665
chr10	108974717	.	TGC	T	1316.52	PASS	AB=0.735;AC=11;AF=0.196;AN=56;BaseQRankSum=13.125;DP=1097;FS=179.815;HRun=0;HaplotypeScore=384.4172;InbreedingCoeff=0.7286;MQ=36.75;MQ0=184;MQRankSum=-11.710;QD=8.28;ReadPosRankSum=-5.691;VQSLOD=-0.0936;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:30:63.17:0,63,1157	0/0:22,0:21:18.45:0,18,534	0/0:43,0:4:8.95:0,9,67	0/0:56,0:10:18.03:0,18,262	0/0:48,0:37:19.55:0,20,1092	0/0:38,2:27:3.36:0,3,817	0/0:30,0:16:27.95:0,28,543	0/0:31,0:14:41.98:0,42,559	0/0:42,0:35:84.09:0,84,1648	0/0:109,3:82:62.28:0,62,2932	0/0:41,0:30:52.24:0,52,872	1/1:20,5:17:18.60:244,19,0	0/1:16,9:18:99:235,0,109	1/1:19,3:14:22.28:198,22,0	1/1:26,6:24:0.26:338,0,0	0/0:58,1:51:99:0,129,2499	0/0:25,0:21:51.12:0,51,955	0/0:31,0:28:58.98:0,59,1317	0/0:21,0:14:41.49:0,41,762	0/0:49,1:47:1.23:0,1,809	0/0:61,0:54:65.42:0,65,1577	1/1:24,5:25:31.14:296,31,0	1/1:18,6:22:23.10:171,23,0	0/0:17,2:15:12.83:0,13,262	0/0:46,1:34:32.38:0,32,1073	0/0:51,2:40:21.34:0,21,1627	0/0:32,0:30:24.10:0,24,1093	0/0:33,0:32:53.75:0,54,1043
chr10	108974730	.	A	ATATGTG	5655.71	PASS	AB=0.982;AC=16;AF=0.308;AN=52;BaseQRankSum=11.634;DP=1128;FS=136.873;HRun=0;HaplotypeScore=455.2288;InbreedingCoeff=0.4396;MQ=33.12;MQ0=262;MQRankSum=-10.573;QD=16.11;ReadPosRankSum=-4.562;VQSLOD=0.2823;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:31:54:0,54,889	0/1:19,0:18:27.70:28,0,455	./.	./.	0/0:49,0:33:2.23:0,2,1153	0/0:44,0:26:44.53:0,45,790	0/0:35,0:16:25.35:0,25,526	0/0:26,0:8:18.03:0,18,378	0/0:45,0:32:80.99:0,81,1161	0/0:112,0:76:99:0,127,3447	0/1:44,0:29:45.79:46,0,820	1/1:27,2:17:14.97:1120,15,0	0/1:25,2:18:99:867,0,106	1/1:24,3:15:39.13:941,39,0	1/1:30,5:24:12.08:1214,12,0	0/0:65,0:53:99:0,123,2392	0/0:24,0:20:42.08:0,42,877	0/0:30,0:26:62.67:0,63,1377	0/0:22,0:13:24.15:0,24,824	0/1:53,0:47:99:139,0,957	0/0:60,0:49:66.17:0,66,1461	1/1:20,5:20:23.89:662,24,0	1/1:12,7:19:12.99:607,13,0	0/1:22,1:16:2.68:3,0,240	0/1:46,0:30:29.18:29,0,1037	0/0:57,0:39:61.17:0,61,1849	0/0:30,0:27:59.72:0,60,1311	0/0:31,0:30:26.01:0,26,1075
chr10	108974736	.	A	AT	1870.17	PASS	AB=0.994;AC=22;AF=0.423;AN=52;BaseQRankSum=14.798;DP=1095;FS=123.697;HRun=1;HaplotypeScore=404.7084;InbreedingCoeff=0.0240;MQ=32.33;MQ0=270;MQRankSum=-12.497;QD=2.91;ReadPosRankSum=-0.735;VQSLOD=0.0806;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:15.39:0,15,407	0/1:19,0:17:99:109,0,129	./.	./.	0/0:47,0:31:21.27:0,21,522	0/1:45,0:26:34.10:34,0,262	0/1:36,0:17:22.94:23,0,210	0/0:22,0:6:18.06:0,18,234	0/0:44,0:31:20.98:0,21,251	0/1:114,2:78:99:409,0,1448	0/1:47,2:31:51.71:52,0,414	1/1:31,0:18:13.19:285,13,0	0/1:20,0:11:50.88:178,0,51	1/1:20,0:8:6.99:99,7,0	1/1:29,0:18:6.51:224,7,0	0/0:62,0:51:60.99:0,61,886	0/0:19,0:15:30.05:0,30,389	0/0:29,0:25:19.51:0,20,601	0/1:21,0:13:27.52:28,0,389	0/1:54,0:48:99:123,0,458	0/0:60,1:47:49.44:0,49,749	1/1:20,1:14:13.03:98,13,0	1/1:15,2:15:16.54:107,17,0	0/0:17,0:14:8.13:0,8,116	0/1:42,0:26:71.17:71,0,486	0/1:56,0:38:99:100,0,707	0/1:31,0:27:2.16:2,0,531	0/1:34,0:33:99:102,0,470
chr10	108974737	.	T	TA	4057.09	PASS	AB=0.830;AC=23;AF=0.442;AN=52;BaseQRankSum=15.037;DP=1090;FS=130.418;HRun=1;HaplotypeScore=399.8630;InbreedingCoeff=-0.0607;MQ=32.20;MQ0=275;MQRankSum=-12.764;QD=6.09;ReadPosRankSum=-1.242;VQSLOD=0.1191;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:26:34.63:0,35,466	0/1:10,8:16:99:199,0,141	./.	./.	0/0:41,5:30:3.53:0,4,545	0/1:41,4:27:54.93:55,0,270	0/1:33,3:17:58.05:58,0,226	0/0:21,0:6:18.06:0,18,252	0/0:44,0:31:17.57:0,18,251	0/1:89,27:78:99:826,0,1572	0/1:33,15:30:99:136,0,443	1/1:17,14:18:27.45:462,27,0	0/1:12,8:11:57.06:294,0,57	1/1:13,7:8:7.78:181,8,0	1/1:14,14:18:22.33:414,22,0	0/0:61,0:49:57.59:0,58,933	0/0:18,0:14:30.05:0,30,419	0/1:26,3:25:12.61:13,0,621	0/1:20,2:13:31.30:31,0,422	0/1:34,18:47:99:321,0,448	0/0:61,1:47:31.96:0,32,788	1/1:12,9:14:14.24:204,14,0	1/1:6,11:15:27.59:257,28,0	0/0:18,3:14:7.10:0,7,123	0/1:34,8:26:99:160,0,528	0/1:50,7:37:99:207,0,766	0/1:27,3:26:23.39:23,0,575	0/1:23,10:32:99:215,0,517
chr10	108974750	.	CT	C	1345.31	PASS	AB=0.926;AC=20;AF=0.370;AN=54;BaseQRankSum=13.063;DP=1026;FS=63.473;HRun=1;HaplotypeScore=384.4038;InbreedingCoeff=-0.1241;MQ=30.83;MQ0=273;MQRankSum=-9.656;QD=2.35;ReadPosRankSum=0.178;VQSLOD=-0.5051;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,2:23:34.68:35,0,362	0/1:13,0:10:25.65:26,0,130	0/0:54,1:1:3.01:0,3,49	./.	0/0:40,0:24:33.78:0,34,529	0/1:42,1:24:7.88:8,0,211	0/1:36,0:17:17.35:17,0,168	0/0:26,0:13:39.10:0,39,594	0/1:40,0:25:9.40:9,0,252	0/1:98,8:67:99:220,0,1404	0/0:42,2:26:29.27:0,29,481	0/1:23,6:17:1.30:263,0,1	0/1:13,6:10:75.88:168,0,76	1/1:18,1:7:6.09:65,6,0	1/1:22,5:16:9.47:284,9,0	0/0:53,3:44:7.34:0,7,845	0/0:16,0:12:19.30:0,19,290	0/1:22,2:20:77.65:78,0,390	0/1:27,1:15:6.28:6,0,438	0/1:48,1:44:23.91:24,0,496	0/0:51,1:38:32.02:0,32,566	0/1:16,1:13:8.78:71,0,9	1/1:8,1:10:3.93:94,4,0	0/0:17,5:15:9.91:0,10,159	0/0:39,0:23:28.82:0,29,603	0/1:49,4:33:58.17:58,0,735	0/0:26,2:23:33.17:0,33,463	0/1:23,2:24:80.09:80,0,221
chr10	108974755	.	CATGT	C	465.31	PASS	AB=0.993;AC=11;AF=0.196;AN=56;BaseQRankSum=7.964;DP=1027;FS=24.054;HRun=0;HaplotypeScore=403.3313;InbreedingCoeff=-0.0309;MQ=30.20;MQ0=268;MQRankSum=-7.659;QD=1.27;ReadPosRankSum=-4.314;VQSLOD=0.5733;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:23:33.03:0,33,537	0/0:13,0:10:0.86:0,1,291	0/0:57,0:1:3.01:0,3,72	0/0:79,0:1:3.01:0,3,32	0/0:38,0:22:33.79:0,34,902	0/0:43,0:24:10.62:0,11,376	0/1:33,0:14:2.32:2,0,190	0/0:33,0:19:56.06:0,56,735	0/0:41,0:26:4.04:0,4,421	0/1:99,5:66:99:176,0,2449	0/0:41,2:25:8.71:0,9,437	0/0:30,0:17:8.96:0,9,96	0/1:19,0:10:40.41:40,0,173	0/1:19,0:7:23.53:26,0,24	0/1:27,0:16:15.95:16,0,60	0/0:57,0:44:71.05:0,71,1501	0/0:13,0:9:14.92:0,15,172	0/0:23,1:20:27.10:0,27,499	0/0:28,0:13:32.08:0,32,504	0/1:47,1:43:29.12:29,0,532	0/0:47,1:34:28.32:0,28,637	0/1:20,0:13:3.21:139,0,3	1/1:12,0:10:16.97:155,17,0	0/0:22,1:16:10.77:0,11,277	0/0:37,1:22:17.92:0,18,878	0/1:55,0:33:3.69:4,0,881	0/1:30,0:24:19.20:19,0,423	0/0:24,1:24:2.64:0,3,234
chr10	108974759	.	TAC	T	1690.43	PASS	AB=0.750;AC=17;AF=0.304;AN=56;BaseQRankSum=-2.031;DP=998;FS=6.115;HRun=0;HaplotypeScore=387.2379;InbreedingCoeff=0.0921;MQ=29.78;MQ0=257;MQRankSum=0.884;QD=4.51;ReadPosRankSum=-2.192;VQSLOD=1.3281;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,15:22:57.71:138,0,58	0/0:13,0:10:15.37:0,15,172	0/0:52,0:1:3.01:0,3,45	0/0:78,0:1:3.01:0,3,45	0/0:37,0:21:28.74:0,29,405	0/0:42,0:23:18.81:0,19,247	0/0:32,0:14:12.71:0,13,137	1/1:13,24:24:5.02:563,5,0	0/0:41,0:26:11.03:0,11,161	0/0:98,0:62:91.59:0,92,1308	0/0:40,0:22:0.16:0,0,130	0/0:29,0:16:16.21:0,16,98	0/0:19,0:10:5.43:0,5,136	0/1:19,0:7:1.99:12,0,2	0/0:27,0:16:20.82:0,21,113	0/0:55,0:42:57.33:0,57,694	1/1:3,9:8:3.12:73,3,0	0/1:11,11:18:99:100,0,131	0/1:17,11:13:21.80:212,0,22	0/1:26,22:43:99:232,0,158	1/1:18,29:33:20.32:216,20,0	0/1:20,0:13:25.83:30,0,26	1/1:12,0:10:3.07:22,3,0	0/0:23,0:16:13.51:0,14,179	0/0:37,0:21:26.37:0,26,456	0/1:25,27:31:99:132,0,142	0/1:14,16:24:79.86:80,0,122	0/1:14,8:21:29.74:41,0,30
chr10	108974766	.	A	ATT	4073.77	PASS	AB=0.873;AC=20;AF=0.357;AN=56;BaseQRankSum=10.477;DP=968;FS=28.719;HRun=0;HaplotypeScore=396.0408;InbreedingCoeff=-0.5691;MQ=28.87;MQ0=242;MQRankSum=-6.253;QD=6.22;ReadPosRankSum=1.061;VQSLOD=1.8116;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:25:9.63:0,10,206	0/1:9,6:12:99:222,0,156	0/0:49,0:1:3.01:0,3,49	0/0:73,0:2:5.99:0,6,56	0/0:30,3:17:16.53:0,17,459	0/1:36,5:22:99:281,0,219	0/1:28,5:15:99:119,0,114	0/1:40,5:31:99:245,0,377	0/1:38,1:24:59.79:60,0,187	0/1:89,16:68:99:754,0,1454	0/1:31,10:22:99:117,0,182	0/1:24,5:16:97.35:296,0,97	0/1:18,1:10:86.31:86,0,103	0/1:15,3:6:23.64:128,0,24	0/1:19,6:14:71.76:239,0,72	0/0:52,0:39:24.37:0,24,770	0/1:11,1:8:29.42:52,0,29	0/1:18,2:16:65.59:66,0,208	0/1:24,2:13:23.24:23,0,201	0/1:31,11:37:99:240,0,285	0/0:39,0:27:5.02:0,5,125	0/0:16,0:9:9.85:0,10,78	0/1:8,0:6:3.63:16,0,4	0/0:19,1:15:12.62:0,13,183	0/1:30,5:19:39.27:39,0,407	0/1:45,5:29:99:412,0,262	0/1:28,3:24:99:189,0,165	0/1:13,8:20:33.74:492,0,34
chr10	108974769	.	C	CAT	1458.45	PASS	AB=0.962;AC=19;AF=0.339;AN=56;BaseQRankSum=10.616;DP=963;FS=16.627;HRun=0;HaplotypeScore=391.5743;InbreedingCoeff=-0.3784;MQ=28.72;MQ0=238;MQRankSum=-7.766;QD=2.36;ReadPosRankSum=-1.539;VQSLOD=0.1105;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:22:10.06:0,10,148	0/1:16,0:13:51.58:52,0,103	0/0:50,0:1:3.01:0,3,43	0/0:70,0:2:6:0,6,54	0/0:32,0:16:14.50:0,14,236	0/1:43,0:24:86.41:118,0,86	0/1:34,0:16:59.67:60,0,83	0/1:46,1:34:63.17:63,0,353	0/1:39,0:24:60.13:80,0,60	0/1:101,3:67:99:302,0,967	0/1:39,2:22:54.79:55,0,77	0/1:26,3:16:23.23:134,0,23	0/1:14,5:10:67.82:115,0,68	1/1:17,1:6:12.62:61,13,0	0/1:21,4:14:3.24:176,0,3	0/1:54,0:41:31.39:31,0,436	0/0:12,0:8:1.24:0,1,56	0/0:19,0:15:6.84:0,7,205	0/1:24,1:13:18.56:19,0,150	0/0:42,0:37:0.35:0,0,211	0/0:38,1:26:12.43:0,12,100	0/1:15,1:9:24.51:25,0,36	0/1:7,0:5:0.77:1,0,5	0/0:19,2:14:9.18:0,9,144	0/0:34,0:18:26.83:0,27,374	0/1:48,1:28:79.29:228,0,79	0/1:31,0:24:56.23:56,0,74	0/1:21,0:20:18.23:37,0,18
chr10	108974773	.	C	CAT	2121.21	PASS	AB=0.870;AC=18;AF=0.321;AN=56;BaseQRankSum=8.334;DP=919;FS=7.763;HRun=0;HaplotypeScore=373.4012;InbreedingCoeff=-0.3858;MQ=29.00;MQ0=219;MQRankSum=-4.784;QD=3.70;ReadPosRankSum=1.118;VQSLOD=1.1207;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:22:15.52:0,16,280	0/1:10,6:13:94.02:135,0,94	0/0:47,0:2:3.01:0,3,46	0/0:61,0:5:9.02:0,9,113	0/0:28,2:14:15.72:0,16,253	0/1:37,5:23:99:190,0,163	0/1:28,5:16:69.60:70,0,118	0/1:44,6:36:99:274,0,787	0/1:38,1:24:37.59:38,0,86	0/1:86,11:63:99:261,0,1200	0/1:30,9:20:79.74:80,0,84	0/1:21,5:13:73.86:203,0,74	0/1:17,1:9:44.78:45,0,110	1/1:15,3:6:11.02:101,11,0	0/1:18,6:13:39.49:187,0,39	0/0:51,0:38:13.31:0,13,534	0/1:11,1:8:35.85:36,0,69	0/0:17,2:15:1.12:0,1,334	0/1:23,2:14:26.24:26,0,287	0/1:33,8:36:99:104,0,466	0/0:36,0:23:12.93:0,13,209	0/0:15,0:9:5.72:0,6,70	0/0:6,0:4:2.18:0,2,8	0/0:20,1:14:11.13:0,11,172	0/0:32,0:17:26.83:0,27,379	0/1:42,3:24:99:179,0,268	0/1:27,3:23:77.73:78,0,219	0/1:12,7:18:67.57:273,0,68
chr10	108974779	.	TTC	T	568.90	PASS	AB=0.884;AC=19;AF=0.339;AN=56;BaseQRankSum=8.453;DP=857;FS=4.855;HRun=0;HaplotypeScore=343.5209;InbreedingCoeff=-0.1478;MQ=29.23;MQ0=198;MQRankSum=-4.237;QD=1.20;ReadPosRankSum=2.085;VQSLOD=1.3075;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:21:32.22:0,32,716	0/1:9,6:12:59.90:60,0,65	0/0:39,0:3:6.02:0,6,106	0/0:51,0:5:9.03:0,9,142	0/1:27,2:13:19.86:20,0,288	0/1:38,5:24:99:137,0,305	0/1:27,5:15:13.45:13,0,192	0/1:48,6:36:40.88:41,0,1267	0/1:33,2:20:12.32:12,0,308	0/0:80,11:59:40.70:0,41,1787	0/1:30,9:20:46.70:47,0,122	1/1:21,5:13:1.18:66,1,0	0/1:17,1:9:3.08:3,0,119	0/1:15,3:6:2.27:27,0,2	0/1:18,6:13:0.55:68,0,1	0/1:48,1:36:99:105,0,671	0/1:11,1:8:1.75:2,0,122	0/0:16,2:14:12.64:0,13,447	0/0:19,2:12:5.81:0,6,499	0/0:29,8:32:4.11:0,4,506	0/0:25,0:14:19.42:0,19,292	0/1:13,0:7:5.53:18,0,6	1/1:6,0:4:5.80:32,6,0	0/0:19,2:14:18.63:0,19,275	0/0:26,0:11:30.06:0,30,464	0/1:38,3:21:4.28:4,0,555	0/0:26,2:21:5.87:0,6,400	0/1:14,7:20:64.25:64,0,123
chr10	108974781	.	C	CAT	2078.22	PASS	AB=0.981;AC=24;AF=0.429;AN=56;BaseQRankSum=7.840;DP=835;FS=7.835;HRun=0;HaplotypeScore=351.9760;InbreedingCoeff=-0.1340;MQ=29.11;MQ0=187;MQRankSum=-2.770;QD=3.59;ReadPosRankSum=4.634;VQSLOD=1.1204;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:21:5.96:0,6,570	0/1:15,0:12:29.20:105,0,29	0/0:34,0:3:6.02:0,6,92	0/0:47,0:5:9.03:0,9,122	0/1:29,0:13:38.02:38,0,213	0/1:42,0:25:74.74:75,0,247	0/1:30,0:15:3.96:4,0,126	0/0:52,0:34:30.96:0,31,961	0/1:36,0:21:99:100,0,217	0/1:88,0:59:99:243,0,1329	0/1:39,0:20:86.57:211,0,87	1/1:22,4:13:29.06:296,29,0	0/1:17,1:9:59.65:60,0,78	1/1:17,1:6:3.42:61,3,0	1/1:20,4:13:22.54:217,23,0	0/1:49,0:36:85.66:86,0,519	0/0:12,0:8:3.95:0,4,112	0/0:17,0:13:12.67:0,13,364	0/0:21,0:12:4.52:0,5,367	0/1:36,0:31:99:232,0,296	0/0:23,0:13:16.60:0,17,224	1/1:11,1:7:6.02:113,6,0	1/1:6,0:4:6.02:100,6,0	0/1:19,2:14:39.20:39,0,177	0/0:23,0:8:21.07:0,21,305	0/1:40,0:20:45.73:46,0,439	0/1:25,0:20:38.90:39,0,294	0/1:20,0:20:98.43:185,0,98
chr10	108974783	.	C	CT	1861.45	PASS	AB=0.861;AC=17;AF=0.304;AN=56;BaseQRankSum=8.699;DP=819;FS=2.260;HRun=0;HaplotypeScore=353.6134;InbreedingCoeff=-0.4214;MQ=29.29;MQ0=172;MQRankSum=-6.076;QD=3.59;ReadPosRankSum=3.969;VQSLOD=2.5901;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:21:44.94:0,45,597	0/1:8,6:11:46.82:120,0,47	0/0:30,0:3:6.01:0,6,71	0/0:46,0:5:12:0,12,148	0/0:28,2:15:16.32:0,16,221	0/1:39,5:26:99:201,0,267	0/1:25,5:16:87.19:87,0,126	0/1:45,6:34:99:274,0,828	0/0:35,1:21:5.93:0,6,286	0/1:72,11:57:99:157,0,1415	0/1:28,9:19:28.85:29,0,161	0/1:21,5:13:56.14:198,0,56	0/1:17,1:9:34.72:35,0,94	0/1:15,3:6:2.95:88,0,3	0/1:17,6:13:31.97:172,0,32	0/0:49,1:37:69.02:0,69,726	0/1:11,1:8:35.65:36,0,95	0/1:15,2:13:2.01:2,0,339	0/1:18,2:11:11.06:11,0,374	0/1:28,8:31:99:120,0,389	0/0:24,0:13:17.66:0,18,217	0/0:12,0:7:4.22:0,4,24	0/0:5,0:4:4.20:0,4,21	0/0:20,1:14:7.39:0,7,194	0/0:21,0:7:20.98:0,21,269	0/1:38,3:21:99:132,0,463	0/1:25,2:20:68.71:69,0,307	0/1:15,7:21:99:285,0,174
chr10	108974791	.	T	TAC	2718.99	PASS	AB=0.923;AC=26;AF=0.481;AN=54;BaseQRankSum=5.689;DP=691;FS=7.890;HRun=0;HaplotypeScore=277.0398;InbreedingCoeff=-0.3095;MQ=30.29;MQ0=127;MQRankSum=-2.560;QD=4.73;ReadPosRankSum=-0.608;VQSLOD=1.6951;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,1:17:11.96:12,0,569	1/1:9,3:9:4.13:165,4,0	0/0:18,0:3:9.03:0,9,129	0/0:34,0:5:14.84:0,15,195	0/1:23,3:14:92.74:93,0,207	0/1:41,2:26:99:126,0,265	0/1:25,0:13:35.62:39,0,36	0/1:48,0:31:12.50:13,0,734	0/1:33,3:24:99:156,0,239	0/1:52,11:45:99:488,0,825	0/1:22,7:16:64.72:326,0,65	1/1:22,0:9:17.19:218,17,0	0/1:12,0:5:7.25:7,0,90	1/1:17,0:5:7.95:58,8,0	1/1:17,0:9:11.74:154,12,0	0/1:44,4:35:99:142,0,476	0/0:9,0:7:1.55:0,2,87	0/0:13,0:9:1.73:0,2,205	0/1:14,1:7:36.01:36,0,210	0/1:26,7:28:99:369,0,262	0/0:21,0:9:8.41:0,8,178	1/1:8,0:4:3.01:39,3,0	./.	0/1:18,0:11:24.39:24,0,170	0/0:17,0:6:18.06:0,18,276	0/1:35,2:21:99:111,0,235	0/1:21,2:18:99:110,0,219	0/1:17,3:21:88.48:195,0,88
chr10	108974793	.	TTCAA	T	589.01	PASS	AB=0.965;AC=16;AF=0.296;AN=54;BaseQRankSum=7.269;DP=671;FS=2.276;HRun=0;HaplotypeScore=275.8252;InbreedingCoeff=-0.1498;MQ=30.15;MQ0=125;MQRankSum=-2.104;QD=1.54;ReadPosRankSum=-0.306;VQSLOD=2.4901;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,1:16:2.47:2,0,1099	1/1:12,0:9:0.67:52,1,0	0/0:19,0:3:9.03:0,9,231	0/0:30,0:5:15.02:0,15,293	0/1:26,0:14:3.92:4,0,402	0/0:42,0:26:2.10:0,2,701	0/0:20,0:10:2.60:0,3,155	0/0:44,0:28:56.50:0,56,1405	0/1:35,2:24:99:114,0,713	0/1:59,1:43:2.19:2,0,1699	0/1:27,1:15:36.87:37,0,166	0/1:21,0:9:32.01:32,0,66	0/0:12,0:5:11.93:0,12,146	0/1:17,0:5:1.41:24,0,1	0/0:17,0:9:2.48:0,2,22	0/1:43,5:36:99:234,0,1064	0/0:10,0:8:14.64:0,15,333	0/1:11,1:8:25.04:25,0,410	0/0:15,0:7:14.28:0,14,256	0/1:32,1:28:99:105,0,435	0/0:20,0:9:18.06:0,18,378	1/1:8,0:4:0.89:2,1,0	./.	0/0:16,2:11:13.20:0,13,354	0/0:17,0:6:18.06:0,18,501	0/1:35,3:21:83.20:83,0,596	0/1:23,0:18:7.98:8,0,399	0/0:21,0:21:27.71:0,28,264
chr10	108974801	.	C	CAT	1025.55	PASS	AB=0.996;AC=24;AF=0.462;AN=52;BaseQRankSum=11.129;DP=569;FS=0.000;HRun=0;HaplotypeScore=250.7843;InbreedingCoeff=-0.1777;MQ=29.13;MQ0=123;MQRankSum=-1.674;QD=2.19;ReadPosRankSum=2.173;VQSLOD=2.3911;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:16:14.81:0,15,372	1/1:10,0:7:8.71:33,9,0	0/0:10,0:2:5.89:0,6,59	0/0:17,0:3:5.91:0,6,39	0/1:21,0:12:30.08:57,0,30	0/1:39,0:23:99:112,0,326	0/1:16,0:9:42.20:42,0,75	0/1:38,0:23:98.03:98,0,421	0/1:38,1:26:36.13:36,0,456	0/1:54,0:39:52.55:53,0,662	0/1:25,0:13:7.48:26,0,7	0/1:21,0:8:28.42:28,0,43	1/1:8,0:2:3.01:32,3,0	1/1:14,0:4:2.74:13,3,0	1/1:17,0:8:3.01:34,3,0	0/1:46,0:34:79.76:80,0,442	0/0:9,0:7:14.05:0,14,165	0/1:11,0:7:3.66:4,0,166	0/0:11,0:3:7.84:0,8,97	0/1:25,0:20:4.32:4,0,75	0/0:18,0:7:3.01:0,3,46	./.	./.	0/1:15,0:8:0:1,0,0	0/0:11,0:3:9:0,9,96	0/1:31,1:19:99:198,0,229	0/1:20,0:15:81.11:106,0,81	1/1:15,2:17:3.22:217,3,0
chr10	108974802	.	A	ATATACACAC	5657.99	PASS	AB=0.874;AC=24;AF=0.444;AN=54;BaseQRankSum=10.091;DP=540;FS=0.000;HRun=0;HaplotypeScore=267.7603;InbreedingCoeff=-0.3172;MQ=28.56;MQ0=123;MQRankSum=-2.081;QD=13.16;ReadPosRankSum=3.989;VQSLOD=3.0861;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:16:35.79:36,0,788	1/1:7,0:6:0.89:2,1,0	0/0:11,0:2:6.02:0,6,138	0/1:17,0:3:1.47:1,0,16	0/1:17,0:10:65.45:126,0,65	0/1:28,5:22:99:621,0,629	0/1:11,1:7:99:102,0,176	0/0:28,0:14:34.96:0,35,877	0/1:33,2:24:99:529,0,875	0/1:41,4:33:99:476,0,1101	0/0:17,0:13:2.16:0,2,24	0/1:16,0:7:12.70:27,0,13	1/1:8,0:2:3.01:52,3,0	1/1:13,0:3:0.89:2,1,0	1/1:11,0:8:6.73:34,7,0	0/1:37,7:33:99:1225,0,880	0/1:8,0:7:52.02:52,0,210	0/1:10,0:7:99:142,0,373	0/0:11,0:3:5.93:0,6,179	0/1:20,0:18:8.11:8,0,64	0/0:18,0:7:2.97:0,3,87	0/0:4,0:1:2.92:0,3,17	./.	0/1:12,0:5:0:0,0,0	0/0:11,0:3:9.02:0,9,172	0/1:24,6:17:99:1373,0,343	0/1:13,5:14:99:703,0,168	0/1:12,0:17:10.98:146,0,11
chr10	108974805	.	CAGATAT	C	163.83	PASS	AB=0.976;AC=13;AF=0.250;AN=52;BaseQRankSum=4.708;DP=510;FS=0.000;HRun=0;HaplotypeScore=214.5377;InbreedingCoeff=0.0997;MQ=27.74;MQ0=121;MQRankSum=0.951;QD=0.68;ReadPosRankSum=-1.536;VQSLOD=2.3107;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:2.94:3,0,706	1/1:9,0:6:2.80:14,3,0	0/0:5,0:2:6.02:0,6,126	0/1:14,0:3:0:0,0,0	0/1:17,0:8:0.01:0,0,0	0/0:34,0:19:26.54:0,27,666	0/0:15,0:7:5.82:0,6,183	0/0:27,0:13:30.09:0,30,697	0/1:36,0:23:14.88:15,0,986	0/0:45,0:30:7.65:0,8,940	0/0:23,0:12:0.26:0,0,1	0/1:17,2:7:3.43:60,0,3	0/0:8,0:2:2.22:0,2,7	0/0:14,1:3:0:0,0,0	0/0:16,1:8:2.04:0,2,7	0/1:44,0:31:99:128,0,980	0/0:7,0:6:7.50:0,7,272	0/1:11,0:7:12.04:12,0,348	0/0:11,0:3:6.02:0,6,164	1/1:21,0:16:6.02:27,6,0	0/0:17,0:6:3.01:0,3,91	./.	./.	0/0:11,0:5:0.47:0,0,1	0/0:10,0:2:3.01:0,3,91	0/1:33,0:17:22.31:22,0,462	0/0:19,0:14:4.73:0,5,200	0/1:18,0:18:0.05:0,0,63
chr10	108974806	.	A	ATT	131.04	PASS	AB=0.922;AC=11;AF=0.220;AN=50;BaseQRankSum=3.326;DP=448;FS=0.000;HRun=0;HaplotypeScore=180.9722;InbreedingCoeff=0.2751;MQ=27.44;MQ0=121;MQRankSum=0.479;QD=1.44;ReadPosRankSum=-2.091;VQSLOD=2.4076;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:27:0,27,267	./.	0/1:4,0:2:14.48:17,0,14	0/0:14,0:3:2.94:0,3,18	0/0:14,0:5:0.41:0,0,1	0/0:32,2:19:28.05:0,28,273	0/0:15,0:7:6.01:0,6,62	0/0:27,0:13:12.67:0,13,225	0/0:34,0:21:40.71:0,41,416	0/0:33,0:20:39.95:0,40,331	1/1:16,0:5:0.47:1,0,0	0/1:17,0:6:53.18:99,0,53	0/0:9,0:2:2.68:0,3,11	1/1:15,0:3:3:29,3,0	1/1:14,0:7:9.02:96,9,0	0/0:39,0:29:48.06:0,48,420	0/0:7,0:6:0.02:0,0,85	0/0:11,0:7:14.97:0,15,137	0/0:9,0:2:6.01:0,6,56	0/0:14,0:9:2.63:0,3,11	0/0:16,0:6:3.01:0,3,31	./.	./.	1/1:10,0:4:0.47:1,0,0	0/0:9,0:1:3.01:0,3,31	0/0:30,0:16:29.34:0,29,236	0/0:16,1:12:10.75:0,11,91	0/1:13,1:14:0.48:0,0,34
chr10	108975186	.	A	ATT	155.87	PASS	AB=0.889;AC=11;AF=0.500;AN=22;BaseQRankSum=3.843;DP=216;FS=0.000;HRun=0;HaplotypeScore=44.8283;InbreedingCoeff=0.2239;MQ=14.70;MQ0=140;MQRankSum=0.562;QD=2.26;ReadPosRankSum=-1.416;VQSLOD=1.2513;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:3,0:3:0.03:0,0,0	./.	./.	./.	0/0:12,0:5:2.84:0,3,14	0/0:9,0:2:0:0,0,0	./.	./.	0/1:9,3:4:47.47:47,0,67	1/1:2,3:4:5.38:18,5,0	0/0:11,0:3:6:0,6,56	./.	./.	./.	0/0:12,0:3:2.96:0,3,19	./.	./.	./.	1/1:4,3:5:10.01:38,10,0	./.	./.	./.	1/1:16,0:2:2.92:17,3,0	1/1:7,6:7:15.74:63,16,0	0/1:11,2:7:67.18:67,0,174	./.	./.
chr10	108975426	.	A	AC	60.42	PASS	AC=6;AF=0.375;AN=16;BaseQRankSum=-0.899;DP=199;FS=0.000;HRun=0;HaplotypeScore=11.5324;MQ=38.88;MQ0=64;MQRankSum=-0.899;QD=3.02;ReadPosRankSum=-0.961;VQSLOD=1.9804;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:44,0:2:3.01:0,3,34	0/0:38,0:4:0.22:0,0,43	./.	./.	./.	1/1:4,1:4:6.78:56,7,0	./.	0/0:11,0:3:9.02:0,9,109	./.	./.	./.	./.	./.	./.	./.	./.	0/0:12,0:6:6.63:0,7,59	0/0:7,0:4:3.01:0,3,35	./.	./.	./.	./.	./.	1/1:9,1:6:10.68:77,11,0	1/1:5,0:4:2.90:16,3,0	./.
chr10	108985235	.	TAC	T	2890.81	PASS	AB=0.857;AC=21;AF=0.389;AN=54;BaseQRankSum=-0.965;DP=662;FS=2.503;HRun=0;HaplotypeScore=139.8923;InbreedingCoeff=0.5675;MQ=54.93;MQ0=5;MQRankSum=1.181;QD=9.45;ReadPosRankSum=3.083;VQSLOD=3.6830;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,15:45:42.46:527,42,0	0/0:9,0:9:21.05:0,21,296	./.	0/0:23,0:10:2.98:0,3,22	0/0:11,0:12:3.46:0,3,27	0/1:21,0:21:0.01:0,0,1	0/0:35,0:32:4.68:0,5,34	1/1:23,1:24:11.72:99,12,0	0/1:23,0:24:2.97:3,0,60	0/1:23,4:27:38.01:38,0,333	0/0:19,0:20:33.39:0,33,631	0/0:11,0:22:8.99:0,9,75	0/0:22,0:26:28.34:0,28,238	0/0:22,0:25:26.97:0,27,261	0/0:22,0:27:31.21:0,31,261	0/0:31,0:32:42.96:0,43,702	1/1:10,14:22:30.08:341,30,0	1/1:9,12:21:29.92:320,30,0	1/1:9,6:14:15.04:170,15,0	1/1:8,13:21:16.43:467,16,0	0/1:17,13:29:30.95:325,0,31	0/0:10,0:31:8.99:0,9,76	0/0:18,0:21:23.72:0,24,190	0/0:19,0:21:11.82:0,12,91	0/0:15,0:28:6:0,6,53	0/1:15,10:25:16.31:276,0,16	1/1:11,12:23:39.11:441,39,0	1/1:4,0:5:8.84:72,9,0
chr10	108985281	.	AAG	A	4420.12	PASS	AB=0.727;AC=29;AF=0.518;AN=56;BaseQRankSum=4.968;DP=667;FS=6.770;HRun=0;HaplotypeScore=174.1763;InbreedingCoeff=0.5646;MQ=49.41;MQ0=17;MQRankSum=-0.531;QD=10.89;ReadPosRankSum=1.093;VQSLOD=4.2796;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,25:42:82.81:908,83,0	0/0:8,0:8:18.06:0,18,283	0/0:39,0:13:9.03:0,9,136	0/0:51,0:17:28.30:0,28,355	0/0:12,0:12:2.94:0,3,18	0/0:13,0:13:4.82:0,5,96	0/0:24,0:23:18.64:0,19,229	1/1:12,10:21:29.55:320,30,0	0/0:21,0:21:8.67:0,9,80	0/0:20,1:21:10.83:0,11,581	0/0:21,1:22:15.60:0,16,669	0/1:16,0:18:16.06:59,0,16	0/1:7,0:26:3.08:85,0,3	1/1:9,0:21:19.81:98,20,0	1/1:13,0:23:12.96:60,13,0	0/0:28,0:28:63.21:0,63,973	1/1:13,8:19:30.08:343,30,0	1/1:13,7:20:33.01:357,33,0	1/1:16,4:18:15.51:170,16,0	1/1:13,10:22:35.88:387,36,0	1/1:19,11:27:26.43:353,26,0	0/1:25,0:29:12.51:43,0,13	0/1:12,0:25:10.35:43,0,10	1/1:7,0:29:0.72:120,1,0	0/0:22,0:22:12.37:0,12,137	0/1:11,12:23:39.64:452,0,40	1/1:12,10:22:35.78:398,36,0	1/1:3,6:8:20.89:224,21,0
chr10	108985309	.	AAGAC	A	6638.73	PASS	AB=0.961;AC=26;AF=0.464;AN=56;BaseQRankSum=-1.444;DP=700;FS=1.808;HRun=0;HaplotypeScore=190.5106;InbreedingCoeff=0.5322;MQ=51.56;MQ0=15;MQRankSum=-2.765;QD=17.15;ReadPosRankSum=-2.723;VQSLOD=4.0686;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,11:37:54.14:767,54,0	0/0:7,0:7:12.04:0,12,270	0/0:33,0:10:18.06:0,18,339	0/0:47,0:21:0.03:0,0,225	1/1:18,0:18:8.33:70,8,0	0/1:17,0:17:9.14:9,0,96	0/1:32,0:31:51.15:79,0,51	1/1:35,0:32:54.14:759,54,0	0/1:26,0:26:52.26:60,0,52	0/0:31,0:30:69.67:0,70,1328	0/0:20,0:20:42.14:0,42,921	0/0:24,0:24:23.81:0,24,405	0/1:28,0:28:15.02:15,0,326	0/0:25,0:25:21.10:0,21,557	0/0:21,0:20:28.27:0,28,363	0/0:24,0:24:51.17:0,51,1112	1/1:23,6:27:62.90:718,63,0	1/1:14,4:18:39.08:517,39,0	1/1:15,2:14:24.06:341,24,0	1/1:12,7:19:48.15:736,48,0	1/1:26,3:26:41.92:493,42,0	0/0:28,0:28:29.19:0,29,367	0/0:19,0:19:16.78:0,17,192	0/0:33,0:33:25.99:0,26,366	0/1:17,0:17:11.10:11,0,87	0/1:18,8:26:21.56:711,0,22	1/1:19,6:25:57.18:856,57,0	1/1:8,5:13:33.10:496,33,0
chr10	108985422	.	T	TA	24268.49	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-4.871;DP=706;FS=3.019;HRun=0;HaplotypeScore=78.9075;InbreedingCoeff=0.9993;MQ=79.35;MQ0=0;MQRankSum=-7.232;QD=42.95;ReadPosRankSum=3.344;VQSLOD=5.4972;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,37:38:99:1580,99,0	0/0:13,0:13:39.13:0,39,540	0/0:29,0:29:84.25:0,84,1117	0/0:18,0:18:26.75:0,27,637	1/1:0,18:18:48.16:754,48,0	1/1:0,25:25:69.24:1102,69,0	1/1:0,34:34:87.30:1366,87,0	1/1:1,32:33:96.31:1509,96,0	1/1:0,26:26:60.20:947,60,0	0/0:33,0:33:99:0,99,1384	0/0:14,0:14:39.13:0,39,546	1/1:1,29:30:78.27:1245,78,0	1/1:0,25:25:72.25:1141,72,0	1/1:1,23:24:66.23:1053,66,0	1/1:0,34:34:99:1627,102,0	0/0:34,0:34:99:0,102,1427	1/1:1,30:31:81.28:1294,81,0	1/1:0,21:21:57.19:910,57,0	1/1:0,16:16:48.16:758,48,0	1/1:1,20:21:60.20:958,60,0	1/1:0,50:50:99:2157,135,0	1/1:0,20:20:51.17:814,51,0	1/1:2,14:16:42.07:639,42,0	1/1:0,26:27:78.26:1234,78,0	1/1:0,23:23:57.19:911,57,0	1/1:0,23:23:63.19:975,63,0	1/1:1,21:22:57.19:911,57,0	1/1:0,8:8:24.08:383,24,0
chr10	108986318	.	TTTTC	T	4818.31	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=7.103;DP=567;FS=2.374;HRun=0;HaplotypeScore=101.6785;InbreedingCoeff=0.7810;MQ=58.66;MQ0=5;MQRankSum=-6.087;QD=17.46;ReadPosRankSum=-0.416;VQSLOD=4.3330;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:62.60:0,63,1188	0/0:11,0:11:26.83:0,27,526	0/1:17,0:9:0.53:1,0,94	0/1:22,0:8:17.52:18,0,47	1/1:32,2:34:77.58:888,78,0	1/1:12,1:13:24.05:354,24,0	1/1:16,0:16:39.07:542,39,0	0/0:24,0:23:41.80:0,42,860	1/1:13,1:13:32.96:382,33,0	0/0:21,0:21:48.09:0,48,1008	0/0:29,0:29:71.62:0,72,1323	1/1:3,10:12:12.04:194,12,0	1/1:3,9:12:5.98:68,6,0	1/1:5,14:19:18.06:280,18,0	1/1:8,16:23:25.33:390,25,0	0/1:15,0:15:9.65:10,0,697	0/0:26,0:26:57.20:0,57,1255	0/0:20,0:20:50.87:0,51,890	0/0:35,0:33:69.10:0,69,1362	0/0:33,0:33:83.50:0,83,1352	0/0:10,0:9:20.27:0,20,389	1/1:11,2:13:26.87:291,27,0	1/1:19,2:21:33.06:456,33,0	1/1:3,12:15:3.01:49,3,0	1/1:23,5:28:62.99:895,63,0	0/0:17,0:16:39.12:0,39,785	0/0:20,0:20:42.06:0,42,699	0/0:12,0:12:33.11:0,33,714
chr10	108986319	.	TTTC	T	2163.12	PASS	AB=0.991;AC=15;AF=0.268;AN=56;BaseQRankSum=12.803;DP=566;FS=3.386;HRun=0;HaplotypeScore=99.7051;InbreedingCoeff=-0.0912;MQ=58.60;MQ0=5;MQRankSum=-6.590;QD=8.29;ReadPosRankSum=1.266;VQSLOD=2.8104;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:66.79:0,67,1117	0/0:11,0:11:32.80:0,33,518	0/1:17,0:9:3.42:3,0,195	0/1:22,0:8:0.61:1,0,78	0/1:34,1:35:19.11:460,0,19	0/1:13,0:13:41.02:149,0,41	0/1:16,0:16:26.30:249,0,26	0/0:23,0:22:53.60:0,54,841	0/1:15,0:14:7.29:244,0,7	0/0:21,0:21:52.88:0,53,903	0/0:30,0:30:80.11:0,80,1181	1/1:12,1:12:11.97:96,12,0	0/1:12,0:12:31.87:32,0,37	0/1:18,1:19:3.87:112,0,4	0/1:23,1:23:16.43:174,0,16	0/0:15,0:15:17.95:0,18,702	0/0:26,0:26:75.10:0,75,1257	0/0:18,0:18:52.63:0,53,761	0/0:34,0:32:93.13:0,93,1407	0/0:34,0:34:92.14:0,92,1348	0/0:10,0:9:24.92:0,25,385	0/1:13,0:13:38.10:159,0,38	0/1:21,0:21:93.75:208,0,94	0/1:15,0:15:35.32:43,0,35	0/1:26,0:26:26.81:390,0,27	0/0:17,0:16:42.11:0,42,740	0/0:20,0:20:50.13:0,50,612	0/0:13,0:13:36.07:0,36,634
chr10	108986331	.	TTTC	T	774.80	PASS	AB=0.981;AC=16;AF=0.286;AN=56;BaseQRankSum=11.485;DP=559;FS=4.487;HRun=0;HaplotypeScore=103.6587;InbreedingCoeff=-0.0717;MQ=57.69;MQ0=8;MQRankSum=-5.571;QD=2.99;ReadPosRankSum=2.289;VQSLOD=1.5029;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:53.12:0,53,1321	0/0:9,0:9:27.09:0,27,593	0/1:23,0:9:11:11,0,125	0/1:21,1:6:43.60:44,0,63	0/1:32,2:34:99:176,0,199	0/1:13,0:13:14.57:66,0,15	1/1:14,0:14:12.68:109,13,0	0/0:26,0:23:54.17:0,54,1059	0/1:15,0:14:30.98:31,0,101	0/0:21,0:21:57.19:0,57,1185	0/0:29,0:29:78.22:0,78,1613	0/1:14,0:13:21.74:39,0,22	0/1:10,1:11:16.79:17,0,23	0/1:20,0:19:17.56:51,0,18	0/1:24,0:23:8.09:88,0,8	0/0:15,0:15:29.03:0,29,805	0/0:21,0:21:57.20:0,57,1309	0/0:20,0:20:26.19:0,26,1008	0/0:36,0:33:90.26:0,90,1750	0/0:34,0:34:89.97:0,90,1720	0/0:8,0:7:17.02:0,17,404	0/1:11,0:11:15.75:75,0,16	0/1:18,1:19:40.48:51,0,40	0/1:14,0:14:6.95:7,0,30	1/1:25,0:23:1.27:172,1,0	0/0:16,0:15:42.14:0,42,903	0/0:19,0:19:54.65:0,55,1091	0/0:14,0:13:36.12:0,36,794
chr10	108986334	.	CTTT	C	1559.50	PASS	AB=0.911;AC=17;AF=0.304;AN=56;BaseQRankSum=10.725;DP=549;FS=5.184;HRun=3;HaplotypeScore=100.8681;InbreedingCoeff=0.2932;MQ=57.35;MQ0=8;MQRankSum=-6.316;QD=6.81;ReadPosRankSum=1.595;VQSLOD=-0.1670;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:66.43:0,66,1365	0/0:10,0:10:30.09:0,30,642	0/0:25,0:10:6.15:0,6,195	0/1:23,0:7:18.75:19,0,78	0/1:31,4:35:92.42:291,0,92	0/1:8,3:12:1.83:148,0,2	1/1:8,5:13:29.71:245,30,0	0/0:23,0:20:58.39:0,58,1115	0/1:9,6:14:47.16:91,0,47	0/0:21,0:21:57.19:0,57,1247	0/0:29,0:29:78.26:0,78,1695	0/1:13,1:13:21.85:62,0,22	0/1:11,0:11:14.17:14,0,25	0/1:18,1:18:16.44:84,0,16	0/1:21,1:21:8.60:131,0,9	0/0:14,0:14:16.04:0,16,807	0/0:20,0:20:59.79:0,60,1386	0/0:21,0:21:42.23:0,42,1076	0/0:35,0:33:94.96:0,95,1814	0/0:34,0:34:90.88:0,91,1719	0/0:8,0:7:20.96:0,21,447	1/1:10,0:10:13.17:105,13,0	1/1:16,0:16:18.12:137,18,0	0/1:15,0:15:6.19:6,0,31	1/1:19,5:22:41.31:406,41,0	0/0:17,0:16:45.03:0,45,924	0/0:19,0:19:54.63:0,55,1097	0/0:14,0:13:36.12:0,36,812
chr10	108986338	.	CCTT	C	182.57	PASS	AB=0.837;AC=7;AF=0.125;AN=56;BaseQRankSum=8.973;DP=548;FS=0.560;HRun=0;HaplotypeScore=105.3320;InbreedingCoeff=0.0095;MQ=57.24;MQ0=9;MQRankSum=-6.814;QD=1.36;ReadPosRankSum=1.568;VQSLOD=1.5855;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:74.95:0,75,1358	0/0:10,0:10:30.09:0,30,582	0/0:27,0:11:2.23:0,2,255	0/0:21,0:7:4.09:0,4,52	0/1:29,3:34:40.71:41,0,169	0/1:8,1:11:5.89:61,0,6	0/1:9,3:13:2.72:55,0,3	0/0:23,0:21:35.52:0,36,954	0/1:9,6:14:40.07:47,0,40	0/0:23,0:23:66.10:0,66,1058	0/0:30,0:30:84.07:0,84,1419	0/1:13,0:13:0.17:0,0,83	0/0:12,0:12:11.50:0,12,116	0/0:19,0:19:6.82:0,7,141	0/1:21,0:21:0.56:1,0,79	0/0:12,0:12:27.97:0,28,523	0/0:20,0:20:57.17:0,57,1082	0/0:22,0:22:61.99:0,62,1130	0/0:36,0:33:92.90:0,93,1534	0/0:31,0:31:81.36:0,81,1355	0/0:9,0:8:23.42:0,23,378	0/0:11,0:11:12:0,12,184	0/0:12,0:12:10.47:0,10,152	0/0:16,0:16:7.98:0,8,90	0/1:20,5:23:16.60:93,0,17	0/0:13,0:13:36.04:0,36,563	0/0:19,0:19:54.61:0,55,1039	0/0:14,0:13:36.06:0,36,586
chr10	108986339	.	CTT	C	908.40	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.117;DP=556;FS=0.000;HRun=16;HaplotypeScore=96.6034;InbreedingCoeff=0.9124;MQ=58.05;MQ0=9;MQRankSum=-5.301;QD=9.27;ReadPosRankSum=1.848;VQSLOD=1.9162;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:68.31:0,68,721	0/0:7,0:10:25.80:0,26,281	0/0:29,0:12:22.73:0,23,215	0/0:21,0:7:4.78:0,5,25	1/1:21,10:34:34.98:305,35,0	1/1:6,5:11:10.55:79,11,0	1/1:9,3:13:23.69:186,24,0	0/0:20,0:21:44.43:0,44,487	1/1:7,7:14:38.61:311,39,0	0/0:23,0:24:47.49:0,47,502	0/0:29,0:32:56.17:0,56,720	0/0:14,0:13:10.22:0,10,87	0/0:14,0:15:17.93:0,18,165	0/0:18,0:18:21.36:0,21,177	0/0:22,0:21:22.06:0,22,143	0/0:11,0:11:23.41:0,23,253	0/0:16,0:20:49.16:0,49,501	0/0:17,0:22:54.18:0,54,579	0/0:27,0:33:66.59:0,67,685	0/0:23,1:31:59.87:0,60,667	0/0:8,0:8:6.63:0,7,169	0/0:9,0:11:20.22:0,20,171	0/0:10,0:12:18.34:0,18,153	0/0:15,0:16:11.29:0,11,94	1/1:18,7:23:23.68:199,24,0	0/0:15,0:14:20.93:0,21,207	0/0:16,0:19:46.85:0,47,540	0/0:11,0:12:23.65:0,24,263
chr10	108987904	.	GT	G	4053.18	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.949;DP=630;FS=0.000;HRun=3;HaplotypeScore=59.9760;InbreedingCoeff=0.9859;MQ=85.23;MQ0=0;MQRankSum=-1.231;QD=33.22;ReadPosRankSum=3.458;VQSLOD=3.9004;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.30:0,90,1294	0/0:12,0:12:36.12:0,36,519	0/0:24,0:24:69.22:0,69,953	0/0:17,0:17:45.10:0,45,593	1/1:2,32:34:93.29:1152,93,0	1/1:1,26:27:69.22:855,69,0	1/1:1,20:21:57.18:707,57,0	0/0:38,0:38:99:0,102,1469	1/1:0,23:23:63.20:781,63,0	0/0:28,0:28:84.26:0,84,1189	0/0:29,0:29:81.23:0,81,1133	0/0:21,0:21:63.21:0,63,907	0/0:15,0:15:42.14:0,42,605	0/0:29,0:29:87.28:0,87,1237	0/0:27,0:27:78.25:0,78,1101	0/0:22,1:23:32.03:0,32,913	0/0:24,0:24:69.23:0,69,993	0/0:20,1:21:22.99:0,23,764	0/0:22,0:22:66.20:0,66,903	0/0:15,0:15:45.11:0,45,624	0/0:14,0:14:42.14:0,42,605	0/0:23,0:23:66.22:0,66,950	0/0:16,0:16:48.16:0,48,686	0/0:27,0:27:81.26:0,81,1147	1/1:1,16:17:45.14:558,45,0	0/0:21,0:21:63.19:0,63,872	0/0:28,0:28:84.27:0,84,1191	0/0:4,0:4:9.03:0,9,127
chr10	108988227	.	AAGAG	A	3533.99	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=4.856;DP=617;FS=0.515;HRun=0;HaplotypeScore=94.9499;InbreedingCoeff=0.7932;MQ=50.49;MQ0=42;MQRankSum=2.253;QD=19.85;ReadPosRankSum=5.529;VQSLOD=2.8256;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:16:11.27:0,11,117	0/0:11,0:11:27.09:0,27,597	0/0:38,0:5:5.96:0,6,54	0/0:62,0:17:8.15:0,8,124	0/0:28,0:26:57.17:0,57,1294	0/0:22,0:21:44.79:0,45,921	0/0:21,0:19:42.12:0,42,895	0/0:17,0:6:0:0,0,0	0/0:25,0:20:45.14:0,45,904	0/0:16,0:16:30.09:0,30,616	0/0:28,0:28:62.95:0,63,1197	1/1:5,21:25:48.16:791,48,0	1/1:4,8:11:15.52:251,16,0	1/1:3,15:15:27.08:429,27,0	1/1:5,12:17:32.61:487,33,0	0/0:19,0:17:27.08:0,27,603	0/1:21,0:12:9.22:9,0,120	0/0:17,0:11:12.25:0,12,122	0/0:13,0:5:10.14:0,10,67	0/0:20,0:16:5.47:0,5,80	./.	1/1:5,21:25:42:587,42,0	1/1:7,18:25:29.99:478,30,0	1/1:8,23:28:30.10:502,30,0	0/0:13,0:14:35.83:0,36,642	0/0:16,0:14:30.45:0,30,355	0/0:25,0:22:11.94:0,12,119	0/0:5,0:5:2.04:0,2,6
chr10	108988396	.	AC	A	3705.62	PASS	AB=0.587;AC=9;AF=0.161;AN=56;BaseQRankSum=0.985;DP=608;FS=0.887;HRun=1;HaplotypeScore=72.1960;InbreedingCoeff=0.8077;MQ=54.94;MQ0=14;MQRankSum=4.711;QD=31.67;ReadPosRankSum=1.240;VQSLOD=3.3692;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:46:81.27:0,81,1233	0/0:11,0:11:33.11:0,33,505	0/0:10,0:10:30.10:0,30,450	0/0:21,0:9:19.70:0,20,310	1/1:1,26:25:72.17:982,72,0	1/1:2,15:15:45.15:629,45,0	0/1:11,26:30:52.33:963,0,52	0/0:38,0:20:60.16:0,60,867	1/1:1,25:25:57.19:796,57,0	0/0:24,0:23:63.17:0,63,938	0/0:7,0:7:21.07:0,21,319	0/0:25,0:25:72.24:0,72,1102	0/0:19,0:18:48.13:0,48,690	0/0:13,0:12:27.09:0,27,412	0/0:28,0:25:72.23:0,72,1079	0/0:15,1:15:0.20:0,0,555	0/0:21,0:19:39.13:0,39,584	0/0:32,0:27:56.98:0,57,812	0/0:23,0:18:51.16:0,51,754	0/0:19,0:19:48.16:0,48,732	0/0:17,0:15:27.06:0,27,380	0/0:18,0:18:45.15:0,45,686	0/0:17,0:17:42.14:0,42,637	0/0:36,0:33:66.22:0,66,1007	1/1:0,10:9:24.08:335,24,0	0/0:17,0:17:51.17:0,51,779	0/0:21,0:21:51.16:0,51,748	0/0:10,0:10:27.09:0,27,413
chr10	108988940	.	C	CCA	8632.14	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-13.959;DP=636;FS=2.909;HRun=0;HaplotypeScore=78.4456;InbreedingCoeff=0.9184;MQ=69.54;MQ0=4;MQRankSum=0.111;QD=30.18;ReadPosRankSum=2.376;VQSLOD=6.7723;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,32:39:35.33:1080,35,0	0/0:8,0:8:24.04:0,24,268	0/1:18,0:15:35.88:36,0,208	0/0:20,1:18:17.74:0,18,325	0/0:19,0:19:51.03:0,51,569	0/0:22,0:22:60.19:0,60,737	0/0:21,0:21:54.12:0,54,624	1/1:5,12:17:36.12:574,36,0	0/0:26,0:26:62.91:0,63,729	0/0:32,0:32:66.03:0,66,780	0/0:16,0:16:42.10:0,42,482	0/0:20,0:20:21.99:0,22,481	0/0:23,0:23:54.14:0,54,637	0/0:24,0:24:48.15:0,48,591	0/0:16,0:17:38.91:0,39,418	0/0:13,0:13:33.10:0,33,406	1/1:8,26:35:38.32:1115,38,0	1/1:4,27:31:72.25:1174,72,0	1/1:1,12:13:33.08:491,33,0	1/1:7,14:21:42.14:682,42,0	1/1:10,36:47:83.38:1368,83,0	0/0:26,0:28:56.97:0,57,655	0/0:15,0:15:30.08:0,30,356	0/0:19,0:19:41.94:0,42,469	0/0:25,0:25:69.05:0,69,826	1/1:3,17:20:14.19:664,14,0	1/1:5,20:23:23.23:861,23,0	1/1:3,14:16:36.12:587,36,0
chr10	108990078	.	C	CT	2805.30	PASS	AB=0.822;AC=28;AF=0.500;AN=56;BaseQRankSum=-8.843;DP=525;FS=0.947;HRun=14;HaplotypeScore=67.3984;InbreedingCoeff=0.3325;MQ=77.29;MQ0=3;MQRankSum=-0.699;QD=7.38;ReadPosRankSum=-1.563;VQSLOD=2.2749;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,21:30:9.37:202,0,9	0/1:9,0:9:0.33:0,0,77	0/1:34,0:20:3.68:4,0,54	0/1:19,0:11:7.78:8,0,11	1/1:14,2:19:15.42:124,15,0	1/1:3,14:19:13.40:218,13,0	1/1:5,8:14:17.84:146,18,0	0/1:9,11:22:9.34:244,0,9	1/1:5,11:16:13.29:221,13,0	0/1:23,0:23:18.67:19,0,140	0/1:11,0:13:2.31:2,0,85	0/0:3,0:11:12.21:0,12,36	0/0:4,0:12:13.12:0,13,49	0/0:2,0:14:19.24:0,19,66	0/0:4,0:24:28.48:0,28,82	0/0:12,0:12:26.54:0,27,170	0/1:7,24:34:11.30:374,0,11	0/1:10,17:27:21.69:303,0,22	0/1:12,3:14:20.54:85,0,21	1/1:3,12:17:38.48:283,38,0	0/0:6,5:11:3.40:0,3,20	0/0:10,0:17:15.04:0,15,53	0/0:9,0:14:2.97:0,3,16	0/0:6,0:30:40.68:0,41,117	1/1:4,14:18:14.99:128,15,0	1/1:4,19:23:30.44:356,30,0	1/1:7,12:19:17.89:158,18,0	1/1:0,8:9:14.84:120,15,0
chr10	108990549	.	ATG	A	5365.90	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=15.101;DP=1046;FS=4.464;HRun=0;HaplotypeScore=129.8849;InbreedingCoeff=0.9694;MQ=60.68;MQ0=1;MQRankSum=0.595;QD=32.52;ReadPosRankSum=1.968;VQSLOD=7.1951;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,147,2472	0/0:11,0:11:24.08:0,24,411	0/0:28,0:15:4.72:0,5,369	0/0:28,0:20:32.78:0,33,414	1/1:1,23:24:63.12:789,63,0	1/1:0,27:26:71.92:946,72,0	1/1:2,34:36:93.30:1223,93,0	0/0:47,0:46:99:0,119,1960	1/1:3,43:46:99:1458,112,0	0/0:48,0:46:99:0,117,1960	0/0:16,0:16:45.13:0,45,715	0/0:46,0:46:99:0,126,2110	0/0:33,0:33:84.29:0,84,1424	0/0:40,0:40:99:0,120,2041	0/0:53,0:53:99:0,147,2442	0/0:32,0:32:93.32:0,93,1594	0/0:45,0:45:99:0,119,2008	0/0:26,0:26:66.23:0,66,1111	0/0:22,0:22:60.21:0,60,1029	0/0:18,0:18:51.17:0,51,875	0/0:130,0:130:99:0,349,5871	0/0:25,0:24:57.19:0,57,959	0/0:28,0:28:72.25:0,72,1217	0/0:69,0:69:99:0,187,3090	1/1:6,26:32:73.79:950,74,0	0/0:35,0:35:99:0,99,1656	0/0:19,0:19:51.16:0,51,839	0/0:26,0:26:63.22:0,63,1067
chr10	108991198	.	A	ATTAT	13094.44	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=2.461;DP=453;FS=6.631;HRun=0;HaplotypeScore=103.3005;InbreedingCoeff=0.8853;MQ=65.84;MQ0=6;MQRankSum=-6.626;QD=36.47;ReadPosRankSum=1.017;VQSLOD=4.8768;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:20,3:23:45.15:944,45,0	0/0:9,0:9:21.07:0,21,377	0/0:14,0:9:23.62:0,24,334	0/0:22,0:14:29.80:0,30,422	1/1:15,0:15:24.08:307,24,0	1/1:14,0:14:5.98:46,6,0	1/1:10,0:10:3.01:35,3,0	1/1:31,0:31:80.05:1630,80,0	1/1:14,0:14:4.83:73,5,0	0/0:20,0:20:48.15:0,48,884	0/0:13,0:13:39.13:0,39,745	1/1:11,0:11:29.37:318,29,0	1/1:12,0:11:27.01:304,27,0	1/1:11,0:11:20.95:254,21,0	1/1:22,0:22:56.43:575,56,0	0/0:16,0:16:40.19:0,40,773	1/1:27,5:27:69.19:1544,69,0	1/1:13,2:13:27.04:507,27,0	1/1:24,1:25:65.87:1271,66,0	1/1:10,1:11:30.10:600,30,0	1/1:11,0:11:27.09:507,27,0	1/1:14,0:14:32.13:360,32,0	1/1:12,0:12:26.93:232,27,0	1/1:15,0:15:44.84:411,45,0	1/1:8,0:8:3.01:36,3,0	1/1:18,4:22:66.23:1553,66,0	1/1:12,3:15:42.09:868,42,0	1/1:14,1:15:36.12:721,36,0
chr10	108991199	.	T	TTA	11184.84	PASS	AB=0.593;AC=43;AF=0.768;AN=56;BaseQRankSum=1.977;DP=475;FS=0.459;HRun=0;HaplotypeScore=101.7446;InbreedingCoeff=0.8118;MQ=64.81;MQ0=8;MQRankSum=-6.407;QD=29.51;ReadPosRankSum=4.241;VQSLOD=6.6573;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,2:24:10.79:682,11,0	0/0:9,0:9:24.04:0,24,305	0/0:14,0:9:23.92:0,24,269	0/0:22,0:14:29.40:0,29,301	1/1:18,0:18:24.07:298,24,0	0/1:5,11:16:6.58:107,0,7	1/1:3,8:11:2.90:35,3,0	1/1:33,0:32:66.90:1062,67,0	1/1:14,0:14:3.01:49,3,0	0/0:21,0:21:54.61:0,55,774	0/0:14,0:14:39.13:0,39,587	1/1:9,2:11:25.61:450,26,0	1/1:15,0:14:22.77:437,23,0	1/1:10,1:11:14.05:295,14,0	1/1:22,0:22:53.63:868,54,0	0/0:16,0:16:41.82:0,42,603	1/1:28,3:27:50.11:1025,50,0	1/1:11,4:13:24.94:399,25,0	1/1:24,2:26:41.76:831,42,0	1/1:11,1:12:29.95:413,30,0	1/1:10,1:11:27.08:365,27,0	1/1:13,1:14:36.09:522,36,0	1/1:13,0:13:24.24:377,24,0	1/1:14,2:16:45.12:646,45,0	1/1:2,8:10:3.01:36,3,0	1/1:21,3:24:66.22:1127,66,0	1/1:15,1:15:42.07:625,42,0	1/1:14,1:14:36.11:537,36,0
chr10	108991200	.	T	TATTCTC	11253.97	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=2.919;DP=509;FS=6.040;HRun=0;HaplotypeScore=147.9753;InbreedingCoeff=0.7171;MQ=62.91;MQ0=9;MQRankSum=-5.910;QD=26.29;ReadPosRankSum=2.849;VQSLOD=4.4574;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:10.85:435,0,11	0/0:8,0:9:23.72:0,24,409	0/0:14,0:9:23.92:0,24,269	0/0:22,0:14:29.47:0,29,302	1/1:6,14:23:24.08:368,24,0	1/1:15,0:15:9.03:164,9,0	1/1:13,0:12:8.90:98,9,0	1/1:31,0:30:58.65:982,59,0	1/1:4,0:18:6.02:187,6,0	0/0:22,0:22:52.29:0,52,827	0/0:14,0:14:39.13:0,39,740	1/1:14,1:15:30.57:571,31,0	1/1:14,1:14:38.50:627,38,0	1/1:11,2:13:30.10:580,30,0	1/1:22,4:26:66.22:1411,66,0	0/1:14,0:15:23.55:24,0,829	1/1:31,0:26:31.83:815,32,0	1/1:14,0:12:21.77:216,22,0	1/1:24,0:24:19.43:529,19,0	1/1:11,0:11:26.93:316,27,0	1/1:10,0:10:25.63:337,26,0	1/1:19,0:19:38.50:633,39,0	1/1:20,0:20:34.91:461,35,0	1/1:17,0:17:45.12:698,45,0	1/1:19,0:18:6.01:61,6,0	1/1:24,0:24:65.75:852,66,0	1/1:16,0:15:5.86:426,6,0	1/1:16,0:14:35.08:465,35,0
chr10	108991243	.	TC	T	2758.93	PASS	AB=0.942;AC=23;AF=0.411;AN=56;BaseQRankSum=2.521;DP=493;FS=22.788;HRun=1;HaplotypeScore=82.8685;InbreedingCoeff=0.6006;MQ=52.22;MQ0=59;MQRankSum=-1.989;QD=10.03;ReadPosRankSum=1.674;VQSLOD=0.1116;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,18:18:20.18:317,20,0	0/0:9,0:9:8.62:0,9,197	0/0:19,0:10:24:0,24,236	0/0:19,0:11:30.03:0,30,293	0/0:21,0:21:42.09:0,42,465	0/0:13,0:13:26.88:0,27,301	0/0:14,0:13:21:0,21,215	0/1:13,9:11:10.18:243,0,10	0/0:10,0:10:20.88:0,21,234	0/0:23,0:22:56.56:0,57,648	0/0:11,0:10:24:0,24,276	0/1:15,0:14:10.97:11,0,96	0/0:14,0:10:9.62:0,10,104	0/0:16,0:14:20.81:0,21,177	0/1:21,0:17:2.74:3,0,153	0/0:14,0:14:22.06:0,22,423	1/1:12,26:30:32.09:610,32,0	1/1:7,8:11:8.63:100,9,0	1/1:6,12:16:22.52:395,23,0	1/1:6,9:10:15.61:226,16,0	1/1:5,9:10:4.85:170,5,0	0/1:19,0:17:18.28:18,0,90	0/0:18,0:16:5.94:0,6,41	0/1:13,0:10:8.47:8,0,33	0/0:17,0:16:21.01:0,21,234	1/1:12,15:20:17.96:364,18,0	1/1:7,14:14:11.64:350,12,0	1/1:3,9:8:12.03:144,12,0
chr10	108991245	.	T	TC	1832.83	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=5.663;DP=480;FS=12.307;HRun=1;HaplotypeScore=84.7669;InbreedingCoeff=0.5922;MQ=54.15;MQ0=58;MQRankSum=-0.282;QD=5.91;ReadPosRankSum=1.979;VQSLOD=-0.5775;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:19:3.52:103,0,4	0/0:9,0:9:27.01:0,27,298	0/0:20,0:11:23.99:0,24,280	0/0:19,0:11:30.05:0,30,347	0/0:20,0:20:47.74:0,48,550	0/0:13,0:13:27.48:0,27,273	0/0:15,0:14:29.85:0,30,323	0/1:21,0:11:28.09:38,0,28	0/0:10,0:10:17.73:0,18,232	0/0:23,0:22:58.21:0,58,715	0/0:10,0:9:21.03:0,21,239	1/1:5,8:14:11.55:119,12,0	1/1:6,6:8:23.35:259,23,0	1/1:4,11:14:3.32:168,3,0	1/1:16,3:15:29.08:255,29,0	0/0:14,0:14:39.96:0,40,479	1/1:35,0:27:32.81:189,33,0	1/1:15,0:11:7.70:52,8,0	1/1:19,0:17:22.54:140,23,0	0/1:16,0:11:18.52:84,0,19	1/1:12,0:8:13.43:58,13,0	1/1:11,5:14:6.78:137,7,0	1/1:0,16:14:6.01:89,6,0	1/1:3,8:9:7.21:75,7,0	0/0:17,0:16:38.76:0,39,365	1/1:27,0:20:33.39:173,33,0	0/1:21,0:14:9.21:73,0,9	0/1:12,0:8:19.98:25,0,20
chr10	108991645	.	G	GCACACA	1283.90	PASS	AB=0.814;AC=19;AF=0.365;AN=52;BaseQRankSum=-2.572;DP=677;FS=7.406;HRun=0;HaplotypeScore=155.2599;InbreedingCoeff=0.3084;MQ=64.32;MQ0=9;MQRankSum=-0.847;QD=3.71;ReadPosRankSum=0.213;VQSLOD=2.0524;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:58,0:57:1.58:2,0,72	0/1:4,0:4:21.93:22,0,110	./.	./.	0/0:3,0:11:0.47:0,0,1	0/1:6,0:13:0:0,0,0	0/1:19,6:24:0.13:0,0,0	0/0:18,0:17:3.37:0,3,27	1/1:12,1:28:2.94:37,3,0	0/0:28,0:29:22.52:0,23,660	0/0:13,0:14:12.04:0,12,243	0/1:14,15:36:39.74:325,0,40	1/1:11,10:24:12.04:329,12,0	0/1:23,1:24:15.57:280,0,16	1/1:16,10:32:9.03:231,9,0	0/0:27,0:32:36.11:0,36,606	0/0:26,0:25:8.61:0,9,83	0/0:17,0:17:8.98:0,9,97	0/0:12,0:11:5.23:0,5,49	0/0:12,0:12:2.83:0,3,41	0/0:57,0:57:3.46:0,3,25	0/1:8,4:16:0.07:0,0,0	0/1:7,1:17:0:0,0,0	1/1:24,2:45:9.03:116,9,0	1/1:5,0:17:2.74:78,3,0	0/0:31,0:31:23.05:0,23,248	0/0:14,0:13:14.64:0,15,174	0/1:5,0:5:4.82:5,0,19
chr10	108991672	.	CACACACACACACAT	C	2966.75	PASS	AB=0.972;AC=13;AF=0.232;AN=56;BaseQRankSum=6.295;DP=805;FS=3.247;HRun=0;HaplotypeScore=243.8573;InbreedingCoeff=0.2394;MQ=54.83;MQ0=20;MQRankSum=0.935;QD=9.36;ReadPosRankSum=-0.450;VQSLOD=2.3002;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:62,2:63:99:261,0,116	0/0:9,0:9:23.87:0,24,912	0/0:27,0:10:25.79:0,26,245	0/0:28,0:11:25.76:0,26,361	0/0:16,0:16:14.91:0,15,491	0/0:22,0:22:35.97:0,36,855	0/0:27,0:26:39.88:0,40,605	0/1:16,0:15:25.71:207,0,26	0/0:34,0:33:32.97:0,33,707	0/0:34,0:33:99:0,99,4347	0/0:21,0:20:38.35:0,38,1648	0/0:40,0:40:49.94:0,50,1945	0/0:23,0:23:33.53:0,34,890	0/0:22,0:22:47.98:0,48,1572	0/0:39,0:39:55.80:0,56,1417	0/0:38,0:38:90.14:0,90,3081	0/1:37,0:36:16.99:117,0,17	0/1:23,0:23:40.45:115,0,40	1/1:18,0:17:40.79:400,41,0	1/1:21,0:21:3.18:64,3,0	0/1:73,0:73:99:584,0,190	0/0:19,0:19:23.14:0,23,523	0/0:23,0:20:9.48:0,9,260	0/0:47,0:47:56.96:0,57,1715	0/0:19,0:19:17.82:0,18,592	0/1:35,3:38:99:842,0,164	0/1:18,2:18:33.99:407,0,34	1/1:7,0:7:12.86:134,13,0
chr10	108991674	.	CACACACACACAT	C	4039.03	PASS	AB=0.563;AC=18;AF=0.321;AN=56;BaseQRankSum=6.720;DP=815;FS=1.344;HRun=0;HaplotypeScore=225.6281;InbreedingCoeff=0.7887;MQ=55.01;MQ0=19;MQRankSum=0.110;QD=12.82;ReadPosRankSum=0.499;VQSLOD=2.7210;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,42:61:34.04:213,0,34	0/0:9,0:9:23.88:0,24,784	0/0:26,0:10:29.48:0,29,235	0/0:29,0:10:28.60:0,29,335	0/0:17,0:17:18.01:0,18,410	0/0:23,0:23:38.65:0,39,742	0/0:30,0:29:42.85:0,43,528	1/1:2,13:14:18.98:325,19,0	0/0:34,0:33:32.88:0,33,614	0/0:34,0:33:99:0,99,3660	0/0:21,0:20:35.44:0,35,1331	0/0:43,0:43:56.73:0,57,1735	0/0:23,0:23:33.53:0,34,710	0/0:24,0:24:54.24:0,54,1346	0/0:41,0:41:61.27:0,61,1175	0/0:36,0:36:83.92:0,84,2504	1/1:6,33:38:10.27:256,10,0	0/1:3,20:23:14.36:206,0,14	1/1:2,16:17:44.85:490,45,0	1/1:3,17:20:2.61:108,3,0	1/1:71,2:73:69.09:831,69,0	0/0:19,0:19:23.09:0,23,486	0/0:24,0:21:12.48:0,12,227	0/0:48,0:48:56.96:0,57,1331	0/0:19,0:19:17.68:0,18,457	1/1:11,26:37:47.17:990,47,0	1/1:19,1:18:43.41:475,43,0	1/1:8,0:8:14.04:144,14,0
chr10	108992043	.	AACC	A	1402.89	PASS	AB=0.964;AC=29;AF=0.518;AN=56;BaseQRankSum=5.278;DP=344;FS=52.377;HRun=0;HaplotypeScore=62.1353;InbreedingCoeff=0.1842;MQ=53.01;MQ0=38;MQRankSum=-6.342;QD=6.21;ReadPosRankSum=2.086;VQSLOD=0.1246;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,4:8:12.04:166,12,0	0/0:12,0:9:21.03:0,21,270	0/1:31,0:9:0.69:1,0,65	0/1:29,0:9:35.64:36,0,74	0/0:19,0:18:14.38:0,14,334	0/0:18,0:18:33.10:0,33,490	0/0:10,0:10:23.94:0,24,261	1/1:9,3:7:5.96:119,6,0	0/1:14,0:13:8.48:8,0,265	0/0:26,0:26:75.13:0,75,1037	0/0:11,0:11:27.09:0,27,423	0/1:9,0:9:14.67:15,0,77	0/1:14,0:14:99:126,0,235	0/1:15,0:15:1.32:1,0,217	0/1:5,0:4:26.88:27,0,120	0/0:8,0:8:20.94:0,21,256	1/1:6,3:6:8.24:90,8,0	1/1:6,1:4:4.57:56,5,0	1/1:9,0:8:14.99:145,15,0	1/1:3,1:3:6.02:80,6,0	1/1:6,1:3:3.01:41,3,0	0/1:12,0:12:99:130,0,182	0/1:13,0:13:99:120,0,146	0/1:12,0:10:10.82:11,0,122	0/0:14,0:14:21.16:0,21,256	0/1:2,4:6:27.50:166,0,27	1/1:3,3:6:14.99:166,15,0	1/1:3,1:3:6.02:83,6,0
chr10	108992065	.	AT	A	631.63	PASS	AB=0.600;AC=19;AF=0.339;AN=56;BaseQRankSum=6.951;DP=251;FS=28.534;HRun=1;HaplotypeScore=45.1930;InbreedingCoeff=0.6765;MQ=89.50;MQ0=5;MQRankSum=-4.511;QD=16.20;ReadPosRankSum=4.010;VQSLOD=2.0115;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:12.04:146,12,0	0/0:5,0:5:15.05:0,15,210	0/0:34,0:21:22.29:0,22,574	0/0:18,0:13:9.94:0,10,203	0/0:16,0:15:36.12:0,36,554	0/0:10,0:10:9.01:0,9,143	0/0:13,0:13:33.10:0,33,501	1/1:1,3:2:3.01:42,3,0	0/0:13,0:13:33.02:0,33,465	0/0:20,0:20:57.19:0,57,873	0/0:12,0:12:33.11:0,33,527	0/0:7,0:7:6.02:0,6,80	0/0:4,0:4:9.03:0,9,130	0/0:7,0:7:6.02:0,6,94	0/0:5,0:4:9.02:0,9,143	0/0:4,0:4:12.04:0,12,187	1/1:1,3:4:5.23:45,5,0	1/1:1,1:2:2.95:38,3,0	1/1:0,5:5:6.02:72,6,0	1/1:0,2:2:6.02:82,6,0	1/1:1,2:2:3.01:37,3,0	0/0:9,0:9:27.08:0,27,379	0/0:11,0:11:17.38:0,17,281	0/0:10,0:9:12.03:0,12,167	0/0:13,0:12:23.97:0,24,360	0/1:2,4:6:31.08:149,0,31	1/1:0,4:4:12:122,12,0	1/1:0,2:2:6.02:77,6,0
chr10	108992430	.	C	CTT	1572.19	PASS	AB=1.000;AC=11;AF=0.306;AN=36;BaseQRankSum=-3.961;DP=235;FS=0.000;HRun=11;HaplotypeScore=77.5279;InbreedingCoeff=0.7975;MQ=77.66;MQ0=0;MQRankSum=-1.686;QD=18.72;ReadPosRankSum=0.279;VQSLOD=2.6966;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:5,0:5:8.99:0,9,87	0/1:14,0:11:8.11:8,0,33	0/0:6,0:6:2.97:0,3,29	1/1:4,15:23:56.46:656,56,0	1/1:1,2:4:9.03:116,9,0	1/1:5,8:14:24.08:333,24,0	./.	1/1:5,7:12:15.05:217,15,0	0/0:28,0:28:69.05:0,69,661	0/0:16,0:18:35.69:0,36,381	0/0:13,0:15:23.46:0,23,199	0/0:16,0:16:26.97:0,27,259	0/0:12,0:13:32.78:0,33,303	0/0:13,0:13:17.98:0,18,175	0/0:6,0:6:11.98:0,12,109	./.	./.	./.	./.	./.	0/0:13,0:13:23.95:0,24,233	0/0:8,0:10:23.48:0,23,198	0/0:7,0:8:17.75:0,18,157	1/1:4,13:16:27.09:391,27,0	./.	./.	./.
chr10	108992467	.	A	AT	1786.07	PASS	AB=0.972;AC=16;AF=0.421;AN=38;BaseQRankSum=1.882;DP=282;FS=0.000;HRun=2;HaplotypeScore=76.9109;InbreedingCoeff=0.7715;MQ=89.57;MQ0=4;MQRankSum=-1.300;QD=11.83;ReadPosRankSum=3.226;VQSLOD=2.1748;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:7:18:0,18,185	0/1:36,0:18:13.30:13,0,149	0/1:30,0:14:4:4,0,63	0/0:25,0:25:62.90:0,63,611	0/0:13,0:13:36.02:0,36,365	0/0:8,0:8:17.84:0,18,197	./.	0/0:9,0:9:21.04:0,21,220	0/0:21,0:21:57.84:0,58,531	0/0:22,0:22:55.43:0,55,531	1/1:13,0:13:23.90:242,24,0	1/1:13,2:15:29.91:304,30,0	1/1:9,0:9:23.27:229,23,0	1/1:9,1:10:15.04:174,15,0	0/0:6,0:6:15.04:0,15,172	./.	./.	./.	./.	./.	1/1:10,0:10:26.93:267,27,0	1/1:12,2:14:29.91:391,30,0	1/1:9,1:10:30.04:326,30,0	0/0:19,0:18:42.05:0,42,445	0/0:1,0:1:3:0,3,25	./.	./.
chr10	108992469	.	T	TTA	2843.69	PASS	AB=1.000;AC=15;AF=0.395;AN=38;BaseQRankSum=-1.424;DP=293;FS=0.000;HRun=0;HaplotypeScore=84.6080;InbreedingCoeff=0.8591;MQ=91.88;MQ0=5;MQRankSum=-1.231;QD=22.57;ReadPosRankSum=3.431;VQSLOD=4.1551;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:6:18.04:0,18,228	0/0:39,0:20:7.89:0,8,183	0/1:35,0:17:4.25:4,0,72	0/0:21,0:23:41.66:0,42,693	0/0:11,0:13:36.55:0,37,454	0/0:8,0:9:22.94:0,23,253	./.	0/0:8,0:8:21.04:0,21,254	0/0:19,0:22:58.64:0,59,605	0/0:20,0:22:62.26:0,62,663	1/1:2,9:15:23.91:357,24,0	1/1:6,9:17:34.35:483,34,0	1/1:0,7:9:24.08:431,24,0	1/1:2,9:12:17.99:276,18,0	0/0:5,0:5:15.05:0,15,227	./.	./.	./.	./.	./.	1/1:1,9:10:26.95:418,27,0	1/1:3,8:15:38.87:532,39,0	1/1:2,8:10:30.04:509,30,0	0/0:17,0:17:42.09:0,42,533	0/0:1,0:1:3.01:0,3,40	./.	./.
chr10	108992907	.	G	GT	70.17	PASS	AB=0.935;AC=5;AF=0.119;AN=42;BaseQRankSum=2.360;DP=420;FS=0.000;HRun=0;HaplotypeScore=51.7949;InbreedingCoeff=0.5844;MQ=55.16;MQ0=21;MQRankSum=-3.048;QD=2.06;ReadPosRankSum=-1.697;VQSLOD=1.0885;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:8,0:8:24.08:0,24,333	0/0:29,0:10:27.08:0,27,359	0/0:35,0:12:36.09:0,36,451	0/0:24,0:22:60.18:0,60,810	0/0:24,0:22:63.21:0,63,880	0/1:27,2:29:23.53:24,0,816	0/0:3,0:3:3.01:0,3,37	0/0:30,0:28:81.27:0,81,1131	0/0:23,0:23:69.21:0,69,934	0/0:22,0:22:66.22:0,66,913	0/0:15,0:15:45.15:0,45,629	0/0:16,0:16:48.10:0,48,629	0/0:19,0:19:54.18:0,54,755	0/0:28,0:28:81.23:0,81,1110	0/0:28,0:28:84.28:0,84,1174	./.	./.	./.	1/1:0,1:1:3.01:48,3,0	1/1:2,2:3:8.52:105,9,0	0/0:18,0:18:54.16:0,54,719	0/0:15,0:15:45.15:0,45,628	0/0:32,0:32:87.29:0,87,1213	0/0:11,0:11:33.11:0,33,461	./.	./.	./.
chr10	108993031	.	A	AGGCCCTGGGTTC	4232.79	PASS	AC=10;AF=0.278;AN=36;BaseQRankSum=-5.205;DP=247;FS=4.496;HRun=0;HaplotypeScore=92.2996;InbreedingCoeff=0.8712;MQ=45.72;MQ0=26;MQRankSum=-6.245;QD=45.51;ReadPosRankSum=0.439;VQSLOD=4.1408;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:2:6.02:0,6,205	0/0:3,0:3:6.02:0,6,214	./.	./.	1/1:8,13:17:12.04:681,12,0	1/1:6,13:17:27.09:1425,27,0	1/1:13,14:20:9.03:521,9,0	./.	1/1:2,12:10:15.52:892,16,0	0/0:21,0:19:51.18:0,51,1674	0/0:15,0:15:36.55:0,37,1199	0/0:9,0:8:18.06:0,18,642	0/0:7,0:6:12.04:0,12,428	0/0:13,0:12:30.10:0,30,986	0/0:11,0:11:27.09:0,27,962	0/0:13,0:13:27.08:0,27,825	./.	./.	./.	./.	./.	0/0:12,0:12:27.09:0,27,927	0/0:15,0:15:42.11:0,42,1206	0/0:10,0:10:18.06:0,18,641	1/1:3,8:10:12.04:714,12,0	0/0:4,0:2:6.02:0,6,214	./.	./.
chr10	108993196	.	GAAGGCTAAAGA	G	5109.79	PASS	AC=14;AF=0.368;AN=38;BaseQRankSum=8.843;DP=223;FS=14.284;HRun=0;HaplotypeScore=106.4055;InbreedingCoeff=0.9218;MQ=96.90;MQ0=0;MQRankSum=-9.992;QD=65.51;ReadPosRankSum=3.412;VQSLOD=3.4931;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:6:18.06:0,18,1050	0/0:13,0:13:39.13:0,39,2041	0/0:13,0:14:36.09:0,36,1824	0/0:8,0:8:20.57:0,21,712	0/0:18,0:17:48.16:0,48,2565	0/0:20,0:20:60.21:0,60,3470	./.	0/0:20,0:18:48.16:0,48,2597	0/0:13,0:13:39.13:0,39,2160	0/0:6,0:6:18.06:0,18,1049	1/1:1,14:15:36.12:1293,36,0	1/1:1,11:11:24.08:868,24,0	1/1:2,10:12:24.08:867,24,0	1/1:2,11:13:30.06:996,30,0	0/0:21,0:21:57.18:0,57,3047	./.	./.	./.	./.	./.	1/1:1,4:5:9.03:326,9,0	1/1:0,5:5:12.04:434,12,0	1/1:2,14:16:9.03:326,9,0	0/0:5,0:5:15.05:0,15,767	0/0:1,0:1:3.01:0,3,175	./.	./.
chr10	108994094	.	G	GAA	5550.27	PASS	AB=0.855;AC=43;AF=0.768;AN=56;BaseQRankSum=-1.595;DP=399;FS=17.491;HRun=9;HaplotypeScore=73.4301;InbreedingCoeff=0.6095;MQ=66.55;MQ0=8;MQRankSum=-3.673;QD=17.56;ReadPosRankSum=-0.088;VQSLOD=1.7226;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,11:19:45.95:632,46,0	0/0:8,0:8:21:0,21,219	0/1:37,0:22:28.39:28,0,279	0/0:33,0:12:15.71:0,16,149	0/1:26,4:30:25.40:198,0,25	1/1:5,0:15:27.24:94,27,0	0/1:4,0:6:1.08:13,0,1	1/1:12,6:18:46.51:551,47,0	1/1:4,1:4:6.12:56,6,0	0/0:14,0:14:42.09:0,42,442	0/0:15,0:15:42.09:0,42,450	1/1:1,0:10:14.97:52,15,0	1/1:0,0:6:12.48:43,12,0	1/1:3,0:8:1.97:23,2,0	1/1:3,0:12:6.57:21,7,0	0/0:10,0:10:30.08:0,30,334	1/1:3,16:19:51.17:808,51,0	1/1:2,6:8:24.08:373,24,0	1/1:6,14:20:28.37:732,28,0	1/1:6,1:6:15.02:200,15,0	1/1:1,1:1:3.01:48,3,0	1/1:1,0:1:1.55:4,2,0	1/1:2,0:14:21.64:73,22,0	1/1:6,0:14:13.72:46,14,0	1/1:10,15:25:17.48:502,17,0	1/1:7,4:12:32.21:418,32,0	1/1:8,4:13:23.57:339,24,0	1/1:6,2:8:21:295,21,0
chr10	108994098	.	AAAAATAAACAATT	A	1449.79	PASS	AB=0.822;AC=6;AF=0.107;AN=56;BaseQRankSum=1.940;DP=415;FS=12.038;HRun=0;HaplotypeScore=157.7936;InbreedingCoeff=0.0184;MQ=68.03;MQ0=8;MQRankSum=-5.720;QD=17.68;ReadPosRankSum=-2.492;VQSLOD=1.7297;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:14.25:0,14,1785	0/0:9,0:9:24.08:0,24,947	0/0:46,0:23:61.25:0,61,1025	0/0:34,0:13:25.48:0,25,581	0/1:12,17:29:99:890,0,468	0/1:14,2:15:55.91:56,0,837	0/1:6,1:7:66.55:187,0,67	0/0:22,0:22:53.56:0,54,2316	1/1:5,0:4:0.12:36,0,0	0/0:15,0:15:45.15:0,45,2307	0/0:14,0:14:42.12:0,42,1855	0/0:10,0:10:17.08:0,17,710	0/0:6,0:6:15.05:0,15,708	0/0:8,0:8:15.05:0,15,781	0/0:14,0:14:2.61:0,3,437	0/0:10,0:10:30.10:0,30,1587	0/0:19,0:19:28.42:0,28,1581	0/0:8,0:8:24.08:0,24,1092	0/0:22,0:21:32.89:0,33,2031	0/0:6,0:5:15.05:0,15,654	0/0:2,0:1:3.01:0,3,93	0/0:1,0:1:3.01:0,3,119	0/0:15,0:15:18.25:0,18,960	0/0:13,0:13:21.05:0,21,648	0/1:22,3:25:99:397,0,924	0/0:13,0:13:39.12:0,39,1626	0/0:13,0:13:2.07:0,2,1111	0/0:10,0:10:24.08:0,24,1181
chr10	108994118	.	T	TA	2415.63	PASS	AB=0.933;AC=21;AF=0.389;AN=54;BaseQRankSum=-0.606;DP=448;FS=7.798;HRun=12;HaplotypeScore=88.0594;InbreedingCoeff=0.6936;MQ=70.14;MQ0=9;MQRankSum=-1.088;QD=9.05;ReadPosRankSum=-0.595;VQSLOD=2.4661;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,13:19:29.88:277,30,0	0/0:4,0:4:11.44:0,11,75	0/1:57,1:25:10.17:10,0,46	0/1:37,0:14:7.48:7,0,9	0/0:25,0:25:37.42:0,37,238	0/0:15,0:14:2.94:0,3,22	0/0:4,0:4:8.19:0,8,50	1/1:6,18:25:50.25:519,50,0	./.	0/0:18,0:17:41.67:0,42,302	0/0:11,0:11:20.85:0,21,153	0/0:9,0:9:14.24:0,14,108	0/0:13,0:13:20.79:0,21,150	0/0:14,0:14:2.49:0,2,161	0/0:7,0:7:11.92:0,12,86	0/0:11,0:11:26.78:0,27,195	0/1:17,5:22:4.50:297,0,5	1/1:4,9:13:14.91:142,15,0	1/1:14,6:19:28.52:235,29,0	1/1:2,8:11:23.87:218,24,0	1/1:2,2:4:3:29,3,0	0/0:4,0:4:8.93:0,9,64	0/0:14,0:15:28.57:0,29,218	0/0:9,0:9:11.90:0,12,87	0/0:22,0:22:26.64:0,27,186	1/1:7,13:20:17.63:344,18,0	1/1:5,11:16:26.84:228,27,0	1/1:1,17:19:32.89:306,33,0
chr10	108995586	.	GC	G	3174.50	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.031;DP=564;FS=2.721;HRun=9;HaplotypeScore=65.4018;InbreedingCoeff=0.9772;MQ=80.39;MQ0=1;MQRankSum=-0.953;QD=22.51;ReadPosRankSum=0.827;VQSLOD=4.5834;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:72.03:0,72,800	0/0:10,0:10:24.07:0,24,271	0/0:23,1:23:16.47:0,16,439	0/0:8,0:8:5.64:0,6,69	0/0:24,1:26:41.55:0,42,699	0/0:33,0:33:90.25:0,90,1028	0/0:20,0:20:54.16:0,54,623	0/0:22,0:22:47.71:0,48,543	0/0:16,0:16:45.11:0,45,498	0/0:24,0:24:63.19:0,63,725	0/0:19,0:20:50.98:0,51,563	1/1:0,17:17:45.02:412,45,0	1/1:3,25:28:69.03:632,69,0	1/1:2,18:20:54.02:494,54,0	1/1:2,18:20:54.02:494,54,0	0/0:16,0:16:42.10:0,42,467	0/0:23,0:23:66.20:0,66,762	0/0:21,0:21:57.16:0,57,648	0/0:19,0:19:44.97:0,45,473	0/0:21,0:21:57.16:0,57,650	0/0:12,0:12:30.08:0,30,336	1/1:1,20:21:51.01:462,51,0	1/1:0,19:19:54.03:494,54,0	1/1:2,14:16:42.02:384,42,0	0/0:16,0:16:45.13:0,45,520	0/0:19,0:19:42.11:0,42,471	0/0:28,0:28:81.24:0,81,935	0/0:16,0:16:45.13:0,45,519
chr10	108996375	.	GGGGCTTGTCTCTTCCTCTTCTCATT	G	11740.80	PASS	AB=0.821;AC=40;AF=0.741;AN=54;BaseQRankSum=10.043;DP=518;FS=2.261;HRun=0;HaplotypeScore=315.5813;InbreedingCoeff=0.6797;MQ=86.53;MQ0=0;MQRankSum=-8.844;QD=33.07;ReadPosRankSum=0.672;VQSLOD=2.7762;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,8:30:18.02:840,18,0	0/0:9,0:9:21.07:0,21,1927	0/0:26,0:26:18.51:0,19,1150	0/0:39,0:39:51.17:0,51,2439	1/1:6,2:8:4.26:298,4,0	1/1:11,8:19:21.07:1154,21,0	1/1:15,9:23:9.03:368,9,0	1/1:21,5:26:12.03:233,12,0	1/1:9,7:16:12.04:684,12,0	0/0:29,0:29:39.13:0,39,3822	0/0:12,0:12:18.06:0,18,1677	1/1:12,7:19:15.05:978,15,0	1/1:5,8:13:12.04:774,12,0	1/1:9,8:17:15.05:912,15,0	1/1:12,5:17:9.03:559,9,0	0/0:24,0:24:51.16:0,51,4530	1/1:9,2:11:5.98:215,6,0	1/1:7,4:11:6.02:308,6,0	1/1:13,3:16:9.03:431,9,0	1/1:13,6:19:17.15:830,17,0	./.	1/1:10,6:16:9.03:537,9,0	1/1:2,3:5:9.03:478,9,0	0/1:16,4:21:0.63:160,0,1	1/1:15,5:20:12.04:713,12,0	0/1:12,3:15:99:351,0,334	1/1:18,5:23:12.04:765,12,0	1/1:4,5:9:3.01:153,3,0
chr10	108996496	.	GTCTCTCTCTCTCTCTTTC	G	4193.68	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-1.266;DP=547;FS=17.501;HRun=0;HaplotypeScore=214.4182;InbreedingCoeff=0.3961;MQ=57.64;MQ0=10;MQRankSum=2.281;QD=10.38;ReadPosRankSum=1.776;VQSLOD=1.2059;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:35.40:370,35,0	0/0:5,0:5:15.03:0,15,740	0/0:34,0:21:21.44:0,21,202	0/0:40,0:25:4.08:0,4,115	0/1:25,0:24:24.10:26,0,24	0/0:11,0:11:6.02:0,6,135	0/1:18,0:18:75.07:117,0,75	1/1:21,0:16:32.87:264,33,0	0/1:19,0:19:99:167,0,131	0/0:14,0:14:29.91:0,30,1182	0/0:13,0:13:25.73:0,26,888	1/1:17,0:17:15.46:114,15,0	1/1:9,0:9:3.90:41,4,0	1/1:13,0:13:17.97:148,18,0	0/1:21,0:20:99:116,0,354	0/0:26,0:26:51.08:0,51,2315	1/1:1,19:19:6.02:278,6,0	1/1:11,3:13:23.92:362,24,0	1/1:9,6:15:17.96:188,18,0	1/1:15,2:18:27.30:346,27,0	1/1:25,0:25:26.55:226,27,0	0/1:23,0:22:0.42:0,0,34	0/1:14,0:14:99:164,0,115	0/1:21,0:21:71.54:72,0,94	1/1:20,0:19:0.15:0,0,0	1/1:5,12:17:30.51:485,31,0	1/1:5,22:26:5.81:296,6,0	1/1:10,2:12:20.96:413,21,0
chr10	108996500	.	CTCTCTCTCTCTT	C	4278.94	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=0.636;DP=528;FS=12.999;HRun=0;HaplotypeScore=163.4055;InbreedingCoeff=0.7595;MQ=55.97;MQ0=14;MQRankSum=1.370;QD=9.81;ReadPosRankSum=1.766;VQSLOD=3.3414;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:30:24.05:255,24,0	0/0:7,0:7:18.04:0,18,648	0/0:30,0:18:21.44:0,21,202	0/1:36,0:21:0.22:0,0,107	1/1:24,0:22:7.95:48,8,0	0/1:11,0:11:5.33:5,0,10	1/1:18,0:18:16.96:136,17,0	1/1:21,0:15:32.87:264,33,0	1/1:17,1:18:30.88:323,31,0	0/0:15,0:15:32.92:0,33,829	0/0:14,0:13:27.95:0,28,568	1/1:16,1:17:20.38:243,20,0	1/1:2,6:8:6.02:196,6,0	1/1:13,0:13:20.97:173,21,0	1/1:20,1:20:24.78:201,25,0	0/0:26,0:25:56.45:0,56,1765	1/1:20,0:18:6.02:176,6,0	1/1:14,0:12:13.89:208,14,0	1/1:12,0:12:14.94:117,15,0	1/1:16,0:16:24.93:230,25,0	1/1:23,0:23:26.36:205,26,0	1/1:4,18:21:8.82:191,9,0	1/1:11,3:14:33.28:289,33,0	1/1:20,0:20:20.56:185,21,0	1/1:22,0:21:0.29:0,0,0	1/1:17,0:17:33.40:390,33,0	1/1:27,0:26:5.83:176,6,0	1/1:11,0:11:17.97:268,18,0
chr10	108996502	.	CTCTCTCTCTT	C	4093.78	PASS	AB=0.971;AC=45;AF=0.804;AN=56;BaseQRankSum=0.826;DP=520;FS=11.606;HRun=0;HaplotypeScore=148.0584;InbreedingCoeff=0.7703;MQ=55.63;MQ0=14;MQRankSum=1.220;QD=9.54;ReadPosRankSum=1.057;VQSLOD=2.0948;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:30:23.70:255,24,0	0/0:7,0:7:18.04:0,18,544	0/0:28,0:16:21.44:0,21,202	0/1:33,0:20:5.65:6,0,106	1/1:5,19:22:7.93:48,8,0	1/1:2,9:11:5.85:81,6,0	1/1:17,1:18:20.44:155,20,0	1/1:21,0:15:32.87:264,33,0	1/1:18,0:18:32.98:291,33,0	0/0:15,0:15:25.79:0,26,625	0/0:14,0:13:27.94:0,28,467	1/1:16,0:16:19.34:204,19,0	1/1:8,0:8:6.02:136,6,0	1/1:12,0:12:20.97:173,21,0	1/1:21,0:20:32.82:274,33,0	0/0:27,0:26:59.45:0,59,1501	1/1:20,0:18:6.02:148,6,0	1/1:14,0:12:13.55:194,14,0	1/1:12,0:12:14.94:117,15,0	1/1:16,0:16:24.36:214,24,0	1/1:23,0:23:26.36:205,26,0	1/1:22,0:21:8.82:113,9,0	1/1:12,2:14:33.42:302,33,0	1/1:19,0:19:20.35:163,20,0	1/1:22,0:21:0.24:0,0,0	1/1:16,0:16:33.82:363,34,0	1/1:26,0:25:5.83:148,6,0	1/1:11,0:11:17.97:240,18,0
chr10	108996504	.	CTCTCTCTT	C	3864.77	PASS	AB=0.846;AC=45;AF=0.804;AN=56;BaseQRankSum=0.896;DP=502;FS=10.212;HRun=0;HaplotypeScore=132.3244;InbreedingCoeff=0.6475;MQ=55.76;MQ0=14;MQRankSum=0.279;QD=8.99;ReadPosRankSum=0.470;VQSLOD=1.6105;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:27:23.69:255,24,0	0/0:7,0:7:18.04:0,18,440	0/0:25,0:14:21.44:0,21,202	0/1:34,0:20:7.20:7,0,106	1/1:23,1:22:7.75:52,8,0	1/1:10,0:10:5.77:42,6,0	1/1:18,0:18:23.43:180,23,0	1/1:20,0:14:32.87:264,33,0	1/1:17,0:17:32.97:277,33,0	0/1:15,0:15:14.97:15,0,440	0/0:14,0:13:27.94:0,28,394	1/1:16,0:16:19.03:190,19,0	1/1:8,0:8:6.02:112,6,0	1/1:12,0:12:20.97:173,21,0	1/1:19,0:18:32.56:274,33,0	0/0:25,0:24:59.41:0,59,1205	1/1:20,0:18:6.02:120,6,0	1/1:14,0:12:13.53:180,14,0	1/1:10,0:10:14.94:117,15,0	1/1:16,0:16:24.26:203,24,0	1/1:21,0:21:26.36:205,26,0	1/1:22,0:21:8.75:76,9,0	1/1:14,0:14:33.37:267,33,0	1/1:20,0:20:23.40:189,23,0	0/1:3,19:22:0.38:0,0,0	1/1:14,0:14:34.18:336,34,0	1/1:26,0:25:5.85:120,6,0	1/1:10,0:10:17.97:212,18,0
chr10	108996696	.	C	CA	1180.77	PASS	AB=0.840;AC=22;AF=0.393;AN=56;BaseQRankSum=-3.121;DP=463;FS=20.095;HRun=15;HaplotypeScore=78.2489;InbreedingCoeff=0.6019;MQ=58.13;MQ0=18;MQRankSum=-0.627;QD=6.99;ReadPosRankSum=-0.606;VQSLOD=0.7265;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:56.67:0,57,332	0/0:5,0:5:11.76:0,12,72	0/0:29,0:9:4.02:0,4,27	0/0:35,0:13:7.99:0,8,45	1/1:23,0:23:11.93:199,12,0	1/1:3,0:3:3:25,3,0	1/1:5,6:11:14.67:104,15,0	0/0:25,0:23:43.77:0,44,266	0/1:12,2:14:11.68:104,0,12	0/1:10,2:13:44.35:44,0,84	0/0:11,0:10:16.86:0,17,91	1/1:6,1:7:2.95:63,3,0	1/1:6,4:10:12.87:103,13,0	1/1:9,4:12:17.75:132,18,0	1/1:11,4:16:9.57:111,10,0	0/0:11,0:11:15.12:0,15,77	0/0:29,0:26:46.54:0,47,284	0/0:21,0:19:35.11:0,35,214	0/0:17,0:14:35.13:0,35,210	0/0:17,0:15:22.33:0,22,184	0/0:16,0:14:20.49:0,20,125	0/1:5,2:7:9.02:42,0,9	0/1:13,3:16:12.48:84,0,12	1/1:11,4:14:17.94:146,18,0	1/1:11,8:19:14.86:222,15,0	0/0:16,0:16:38.10:0,38,231	0/0:16,0:16:26.35:0,26,161	0/0:16,0:16:25.86:0,26,156
chr10	108996700	.	A	AC	513.68	PASS	AB=0.993;AC=14;AF=0.250;AN=56;BaseQRankSum=-2.636;DP=449;FS=26.616;HRun=0;HaplotypeScore=78.5981;InbreedingCoeff=0.2048;MQ=58.28;MQ0=16;MQRankSum=-1.583;QD=2.72;ReadPosRankSum=1.404;VQSLOD=0.8539;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:2.87:0,3,29	0/0:6,0:6:15.04:0,15,193	0/0:27,0:9:14.44:0,14,145	0/0:36,0:13:26.44:0,26,217	1/1:5,18:23:26.36:447,26,0	0/1:2,0:2:0.09:0,0,22	0/0:12,0:11:16.80:0,17,88	1/1:22,1:22:11.27:84,11,0	0/0:13,0:13:8.63:0,9,150	0/0:16,0:16:34.01:0,34,382	0/0:12,0:10:29.99:0,30,320	0/0:6,0:6:5.45:0,5,56	0/0:10,0:10:11.35:0,11,92	0/0:14,0:12:20.71:0,21,122	0/0:14,0:14:26.04:0,26,177	0/0:12,0:11:30.01:0,30,307	0/1:27,0:24:6.74:7,0,26	0/1:20,0:18:0.34:0,0,94	0/1:15,0:13:11.27:14,0,11	0/1:16,1:16:45.57:46,0,67	1/1:15,0:13:0.48:32,0,0	0/0:8,0:8:16.33:0,16,141	0/0:18,0:18:26.48:0,26,231	0/0:14,0:14:2.63:0,3,42	0/0:16,0:16:9.16:0,9,145	0/1:18,0:18:18.45:18,0,71	0/1:14,0:14:1.38:1,0,22	0/1:15,0:15:8.41:8,0,12
chr10	108996734	.	ATT	A	1948.55	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=2.340;DP=392;FS=8.284;HRun=16;HaplotypeScore=81.7603;InbreedingCoeff=0.8505;MQ=66.71;MQ0=0;MQRankSum=2.715;QD=7.44;ReadPosRankSum=5.590;VQSLOD=0.2847;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,15:21:7.62:190,8,0	0/0:5,0:7:8.86:0,9,88	0/0:15,1:13:20.34:0,20,199	0/1:12,0:11:1.36:1,0,13	0/0:24,0:25:44.07:0,44,403	0/0:5,0:5:10.19:0,10,78	0/0:14,0:14:32.94:0,33,305	1/1:8,6:15:20.38:162,20,0	0/0:9,0:14:26.97:0,27,262	0/0:14,0:15:30.51:0,31,325	0/0:5,0:7:11.36:0,11,85	1/1:1,0:9:19.17:82,19,0	1/1:6,0:12:5.39:23,5,0	1/1:5,0:7:5.37:23,5,0	1/1:3,0:17:32.84:140,33,0	0/0:8,0:9:23.39:0,23,235	1/1:4,17:21:29.74:251,30,0	1/1:6,10:16:20.53:162,21,0	1/1:8,10:20:29.15:221,29,0	1/1:7,8:18:14.02:98,14,0	1/1:4,8:12:13.92:124,14,0	1/1:2,0:12:21.08:92,21,0	1/1:7,0:13:6.94:33,7,0	1/1:4,0:17:29.77:127,30,0	0/0:15,0:16:41.97:0,42,420	1/1:5,8:16:11.45:170,11,0	1/1:2,6:8:5.92:50,6,0	1/1:3,8:12:26.64:211,27,0
chr10	108997719	.	TATTA	T	5833.42	PASS	AB=0.724;AC=41;AF=0.820;AN=50;BaseQRankSum=5.044;DP=348;FS=4.208;HRun=0;HaplotypeScore=82.2645;InbreedingCoeff=0.7005;MQ=57.37;MQ0=3;MQRankSum=-4.337;QD=19.44;ReadPosRankSum=1.311;VQSLOD=3.8755;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,11:21:45.02:661,45,0	0/0:10,0:10:21.07:0,21,488	./.	./.	1/1:11,4:15:24.01:309,24,0	1/1:10,7:17:33.08:472,33,0	1/1:9,0:9:3.01:46,3,0	1/1:28,1:29:39.09:506,39,0	1/1:0,2:2:6.02:96,6,0	0/0:6,0:6:9.03:0,9,216	0/0:13,0:13:21.07:0,21,496	1/1:2,0:12:15.02:140,15,0	1/1:3,0:17:30.03:280,30,0	1/1:3,0:10:15.02:140,15,0	1/1:1,0:14:26.87:237,27,0	0/0:7,0:7:18.06:0,18,429	1/1:11,4:15:15.04:207,15,0	1/1:11,3:14:18.02:262,18,0	1/1:8,6:12:27.09:433,27,0	1/1:11,4:15:15.05:238,15,0	1/1:4,1:5:3.01:48,3,0	1/1:3,0:7:9.01:84,9,0	1/1:2,0:11:8.14:61,8,0	./.	1/1:6,9:15:30.10:478,30,0	0/1:13,8:21:27.23:536,0,27	1/1:15,4:19:22.29:313,22,0	1/1:14,4:17:18.06:288,18,0
chr10	108997752	.	ATTGC	A	5877.80	PASS	AB=0.613;AC=29;AF=0.518;AN=56;BaseQRankSum=4.797;DP=378;FS=0.000;HRun=0;HaplotypeScore=95.3046;InbreedingCoeff=0.8833;MQ=57.75;MQ0=3;MQRankSum=-2.723;QD=27.60;ReadPosRankSum=2.272;VQSLOD=4.7350;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,17:23:45.15:711,45,0	0/0:8,0:8:15.05:0,15,360	0/0:17,0:12:19.28:0,19,255	0/0:7,0:5:14.06:0,14,233	1/1:3,7:10:21.07:331,21,0	1/1:4,14:18:33.11:519,33,0	1/1:0,1:1:3.01:49,3,0	1/1:9,17:26:51.14:727,51,0	1/1:1,8:9:18.06:275,18,0	0/0:18,0:18:51.18:0,51,1230	0/0:13,0:13:24.08:0,24,547	0/0:12,0:12:15.01:0,15,181	0/0:19,0:19:32.96:0,33,490	0/0:11,0:11:19.22:0,19,245	0/0:19,0:19:41.98:0,42,598	0/0:9,0:9:18.06:0,18,411	1/1:2,14:16:18.06:285,18,0	1/1:5,9:14:21.07:337,21,0	1/1:10,10:18:33.11:501,33,0	1/1:2,10:12:33.11:529,33,0	1/1:1,10:11:12.04:195,12,0	0/0:10,0:10:27.04:0,27,460	0/0:13,0:13:24.05:0,24,414	0/0:9,0:9:21.07:0,21,496	1/1:4,8:12:24.08:379,24,0	0/1:7,12:19:28.33:479,0,28	1/1:4,6:10:15.05:233,15,0	1/1:5,7:11:23.97:328,24,0
chr10	108997775	.	GC	G	936.76	PASS	AB=0.969;AC=15;AF=0.268;AN=56;BaseQRankSum=10.885;DP=442;FS=1.560;HRun=1;HaplotypeScore=88.7716;InbreedingCoeff=-0.1750;MQ=62.25;MQ0=2;MQRankSum=-3.781;QD=4.44;ReadPosRankSum=5.625;VQSLOD=0.6796;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:99:122,0,194	0/0:5,0:5:15.05:0,15,240	0/0:37,0:26:24.76:0,25,740	0/0:15,0:14:39.51:0,40,502	0/1:11,0:11:41.82:42,0,133	0/1:16,1:17:15.89:126,0,16	0/1:2,0:2:0.07:0,0,35	0/1:33,0:33:99:244,0,492	0/1:12,1:13:58.22:58,0,117	0/0:26,0:26:78.25:0,78,1164	0/0:13,0:13:33.96:0,34,538	0/0:14,0:14:30.10:0,30,436	0/0:20,0:20:54.10:0,54,721	0/0:11,0:11:30.10:0,30,458	0/0:25,0:25:66.18:0,66,938	0/0:7,0:7:21.07:0,21,327	0/1:18,0:18:4.31:4,0,103	0/1:11,0:11:11.84:12,0,63	0/1:15,1:16:99:160,0,104	0/1:14,1:15:77.16:77,0,125	0/0:14,0:14:0.91:0,1,140	0/0:12,0:12:36.12:0,36,558	0/0:11,0:11:30.05:0,30,419	0/0:21,0:21:57.12:0,57,781	0/1:13,1:14:99:109,0,164	0/1:19,0:19:35.58:36,0,253	0/1:9,1:10:60.95:61,0,100	1/1:7,1:8:11.94:41,12,0
chr10	108997935	.	A	AT	1987.40	PASS	AB=0.950;AC=19;AF=0.339;AN=56;BaseQRankSum=-1.610;DP=706;FS=1.360;HRun=13;HaplotypeScore=97.3881;InbreedingCoeff=0.4721;MQ=73.01;MQ0=1;MQRankSum=-0.085;QD=6.37;ReadPosRankSum=-5.471;VQSLOD=1.4204;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,1:52:45.97:0,46,460	0/0:6,0:6:15.74:0,16,103	0/0:20,0:24:20:0,20,147	0/0:16,0:16:4.49:0,4,57	0/1:24,1:25:9.37:9,0,203	0/0:27,1:30:0.53:0,1,231	0/0:20,1:23:0.71:0,1,140	0/1:40,4:44:76.40:76,0,276	0/1:22,1:23:20.80:21,0,121	0/0:30,2:33:10.35:0,10,189	0/1:23,1:24:17.85:18,0,254	1/1:18,6:25:34.16:374,34,0	1/1:17,8:25:0.81:255,1,0	1/1:19,4:23:35.11:276,35,0	1/1:29,6:35:48.65:482,49,0	0/0:30,0:34:24.08:0,24,143	0/0:27,0:30:20.64:0,21,226	0/0:17,0:18:28.66:0,29,189	0/0:23,0:23:20.93:0,21,188	0/0:24,0:24:20.84:0,21,264	0/1:28,1:30:23.20:23,0,235	1/1:10,7:17:29.97:270,30,0	1/1:4,9:13:15.86:133,16,0	1/1:18,8:27:15.60:238,16,0	0/0:13,0:12:20.72:0,21,144	0/0:28,0:32:55.59:0,56,352	0/0:20,0:21:16.85:0,17,228	0/0:11,0:13:33.83:0,34,217
chr10	108998004	.	T	TTGTGTGTG	10529.60	PASS	AB=0.618;AC=40;AF=0.741;AN=54;BaseQRankSum=6.139;DP=837;FS=0.990;HRun=0;HaplotypeScore=200.0343;InbreedingCoeff=0.7606;MQ=51.72;MQ0=19;MQRankSum=-7.953;QD=16.71;ReadPosRankSum=-4.209;VQSLOD=3.5166;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:42:9:103,9,0	0/0:11,0:11:24.07:0,24,555	0/0:43,0:23:17.01:0,17,433	0/0:43,0:31:20.89:0,21,274	0/1:11,12:24:0:0,0,0	1/1:5,16:28:36.12:1008,36,0	1/1:13,17:32:23.75:574,24,0	1/1:55,0:47:76.30:1098,76,0	1/1:6,22:33:53.77:1838,54,0	0/0:39,0:40:84.22:0,84,1832	0/0:21,0:21:39.12:0,39,940	1/1:13,0:22:14.99:200,15,0	1/1:9,0:38:39.07:1092,39,0	1/1:5,0:27:21.06:449,21,0	1/1:10,0:40:22.69:510,23,0	0/0:32,0:35:93.30:0,93,2165	1/1:10,1:27:5.05:111,5,0	1/1:10,0:20:13.54:258,14,0	1/1:11,0:24:42.14:856,42,0	./.	1/1:26,4:57:5.69:130,6,0	1/1:9,0:18:6.02:101,6,0	1/1:20,0:18:12.68:107,13,0	1/1:5,0:34:7.55:63,8,0	1/1:3,7:14:9.03:323,9,0	0/1:8,0:27:29.11:951,0,29	1/1:9,1:22:17.99:392,18,0	1/1:2,0:15:12.04:363,12,0
chr10	108998568	.	CT	C	2318.95	PASS	AB=0.713;AC=18;AF=0.321;AN=56;BaseQRankSum=-0.501;DP=550;FS=0.830;HRun=12;HaplotypeScore=74.3178;InbreedingCoeff=0.5883;MQ=60.75;MQ0=13;MQRankSum=-0.221;QD=9.87;ReadPosRankSum=0.356;VQSLOD=3.0224;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,26:33:62.72:487,63,0	0/0:4,0:4:12.02:0,12,121	0/0:34,0:13:6.37:0,6,59	0/0:32,0:15:19:0,19,126	0/1:27,1:29:10.47:10,0,400	0/0:25,0:24:57.87:0,58,537	0/0:15,0:15:36.05:0,36,357	0/1:10,15:24:12.32:239,0,12	0/0:16,1:16:8.80:0,9,232	0/0:27,2:29:25.45:0,25,587	0/0:17,1:18:9.82:0,10,275	0/0:15,0:15:39.06:0,39,386	0/0:20,0:20:40.63:0,41,400	0/0:15,0:15:32.80:0,33,315	0/0:21,0:21:32.23:0,32,327	0/0:16,1:16:28.27:0,28,268	1/1:5,20:21:19.74:243,20,0	0/1:6,13:18:16.30:245,0,16	1/1:4,9:11:26.87:208,27,0	1/1:12,8:20:21.27:243,21,0	1/1:6,6:12:23.14:169,23,0	0/0:11,1:12:3.14:0,3,186	0/0:10,0:10:24.05:0,24,243	0/0:10,1:11:0.82:0,1,190	0/0:18,1:19:10.93:0,11,344	0/1:11,11:22:51.67:191,0,52	1/1:11,9:21:22.48:302,22,0	1/1:7,7:12:25.71:178,26,0
chr10	108998682	.	AT	A	834.56	PASS	AB=0.958;AC=13;AF=0.232;AN=56;BaseQRankSum=7.786;DP=353;FS=0.000;HRun=12;HaplotypeScore=42.2594;InbreedingCoeff=0.6152;MQ=56.03;MQ0=10;MQRankSum=0.317;QD=10.84;ReadPosRankSum=0.878;VQSLOD=2.3684;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:90.12:0,90,892	0/0:7,0:7:9.02:0,9,91	0/0:11,0:4:8.95:0,9,79	0/1:9,0:4:7.12:7,0,52	1/1:0,14:14:35.84:279,36,0	1/1:1,14:15:38.85:302,39,0	1/1:4,9:14:25.93:192,26,0	0/0:22,0:18:45:0,45,435	1/1:3,6:9:11.92:93,12,0	0/0:12,1:13:9.83:0,10,280	0/0:11,0:11:7.37:0,7,246	0/1:6,1:7:8.20:8,0,107	0/0:9,0:8:15.02:0,15,146	0/0:4,0:4:12.02:0,12,122	0/0:14,0:14:36.07:0,36,365	0/1:4,0:4:14.04:14,0,52	0/0:23,1:23:27.83:0,28,453	0/0:16,0:16:39:0,39,378	0/0:19,0:18:42.08:0,42,422	0/0:6,0:7:17.85:0,18,158	0/0:18,0:18:48.08:0,48,476	0/0:7,0:8:18:0,18,172	0/0:10,0:9:15.03:0,15,152	0/0:13,0:13:24.04:0,24,239	1/1:0,5:5:14.94:116,15,0	0/0:15,0:14:27.05:0,27,270	0/0:11,1:12:6.78:0,7,234	0/0:6,0:6:1.12:0,1,112
chr10	108998740	.	ATG	A	2712.14	PASS	AB=0.636;AC=13;AF=0.232;AN=56;BaseQRankSum=6.588;DP=454;FS=2.221;HRun=0;HaplotypeScore=69.5946;InbreedingCoeff=0.9057;MQ=69.31;MQ0=1;MQRankSum=-2.043;QD=29.48;ReadPosRankSum=1.935;VQSLOD=4.9311;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,99,1629	0/0:9,0:9:24.07:0,24,384	0/0:24,0:24:41.87:0,42,595	0/0:18,0:17:29.29:0,29,518	0/0:11,0:11:30.10:0,30,513	0/0:23,0:23:63.22:0,63,1078	0/0:17,0:17:42.14:0,42,720	0/0:27,0:27:69.21:0,69,1100	0/0:18,0:18:42.14:0,42,718	0/0:12,0:12:27.06:0,27,431	0/0:13,0:13:39.12:0,39,627	1/1:0,14:14:38.98:511,39,0	1/1:1,11:12:27.09:354,27,0	1/1:1,9:10:30.10:393,30,0	0/1:9,12:21:8.92:454,0,9	0/0:9,0:9:27.08:0,27,436	0/0:25,0:25:57.14:0,57,914	0/0:17,0:17:48.16:0,48,820	0/0:12,0:12:24.08:0,24,410	0/0:6,0:6:15.03:0,15,229	0/0:27,0:27:69.24:0,69,1181	1/1:4,9:13:39.10:483,39,0	1/1:2,8:10:23.82:315,24,0	1/1:1,11:12:30.10:393,30,0	0/0:9,0:9:21.07:0,21,360	0/0:20,0:20:60.21:0,60,1028	0/0:16,0:16:39.11:0,39,638	0/0:9,0:9:27.08:0,27,435
chr10	108998815	.	GAA	G	1977.56	PASS	AB=0.867;AC=15;AF=0.268;AN=56;BaseQRankSum=4.399;DP=455;FS=11.839;HRun=12;HaplotypeScore=68.5721;InbreedingCoeff=0.9092;MQ=65.03;MQ0=0;MQRankSum=-0.748;QD=17.35;ReadPosRankSum=5.090;VQSLOD=1.2314;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:34:82.98:0,83,1023	0/0:7,0:7:15.04:0,15,204	0/0:8,0:8:5.81:0,6,56	0/1:11,0:11:0.34:0,0,93	0/0:4,0:24:66.01:0,66,660	0/0:4,0:17:35.50:0,36,327	0/0:3,0:11:24.03:0,24,228	0/0:30,0:30:69.19:0,69,940	0/0:6,0:25:42.05:0,42,403	0/0:16,0:19:32.56:0,33,368	0/0:14,0:14:30.08:0,30,411	1/1:5,12:17:36.05:366,36,0	1/1:1,5:7:8.73:144,9,0	1/1:1,14:15:36.07:366,36,0	1/1:2,17:20:41.81:408,42,0	0/0:8,0:8:15.05:0,15,223	0/0:17,0:17:42.10:0,42,560	0/0:11,0:13:26.55:0,27,327	0/0:20,0:20:48.11:0,48,668	0/0:11,0:16:43.45:0,43,470	0/0:15,0:15:42.09:0,42,566	1/1:4,13:17:36.04:366,36,0	1/1:0,7:7:11.99:122,12,0	1/1:2,16:18:39.06:397,39,0	0/0:5,0:15:30.04:0,30,301	0/0:23,0:26:62.13:0,62,803	0/0:13,0:13:36.03:0,36,467	0/0:5,0:8:23.55:0,24,288
chr10	108998928	.	TTGTGTGTGTGTGTGTGTGTGTGTG	T	4484.01	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=5.996;DP=548;FS=0.000;HRun=0;HaplotypeScore=282.4186;InbreedingCoeff=0.8367;MQ=55.18;MQ0=11;MQRankSum=-7.065;QD=32.97;ReadPosRankSum=1.607;VQSLOD=3.3289;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:25:26.32:0,26,773	0/0:9,0:8:18.06:0,18,1365	0/0:13,0:7:5.81:0,6,81	./.	0/0:12,0:11:3.01:0,3,234	0/0:11,0:17:6.49:0,6,319	0/0:17,0:18:29.75:0,30,1421	0/0:22,0:22:25.31:0,25,569	0/0:17,0:21:33.11:0,33,2194	0/0:22,0:22:27.09:0,27,1338	0/0:23,0:22:29.04:0,29,2063	1/1:9,18:27:18.06:882,18,0	1/1:7,9:15:14.73:936,15,0	1/1:15,10:25:18.06:1045,18,0	1/1:12,10:22:14.60:785,15,0	0/0:17,0:18:39.12:0,39,3254	0/0:21,0:33:33.09:0,33,867	0/0:12,0:16:21.07:0,21,564	0/0:20,0:22:13.28:0,13,383	0/0:14,0:24:30.08:0,30,641	0/0:27,0:27:24.08:0,24,815	1/1:7,7:13:3.01:176,3,0	1/1:8,5:13:12.04:641,12,0	1/1:11,8:18:2.97:20,3,0	0/0:14,0:14:21.07:0,21,1352	0/0:19,0:28:63.20:0,63,1821	0/0:16,0:19:36.12:0,36,742	0/0:10,0:10:12.04:0,12,429
chr10	108999846	.	A	AT	2890.25	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-9.574;DP=615;FS=1.875;HRun=9;HaplotypeScore=67.0474;InbreedingCoeff=0.9820;MQ=73.19;MQ0=2;MQRankSum=0.275;QD=22.23;ReadPosRankSum=2.029;VQSLOD=4.6643;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:77.96:0,78,677	0/0:9,0:9:23.99:0,24,208	0/0:32,0:18:20.37:0,20,244	0/0:25,0:21:20.71:0,21,177	0/0:31,0:31:83.96:0,84,725	0/0:26,0:26:65.97:0,66,573	0/0:26,0:26:62.98:0,63,547	0/0:28,0:28:59.95:0,60,513	0/0:20,0:20:47.95:0,48,413	0/0:28,0:28:49.72:0,50,592	0/0:28,0:28:68.95:0,69,591	1/1:4,11:15:7.07:306,7,0	1/1:3,12:16:32.92:345,33,0	1/1:3,17:20:42.11:464,42,0	1/1:4,27:31:69.19:763,69,0	0/0:20,0:20:53.95:0,54,461	0/0:17,0:17:47.99:0,48,417	0/0:20,0:20:47.77:0,48,416	0/0:19,0:19:38.96:0,39,334	0/0:27,0:27:71.95:0,72,620	0/0:18,0:18:44.97:0,45,387	1/1:0,14:15:35.93:378,36,0	1/1:1,18:19:39.11:431,39,0	1/1:2,12:14:36.10:398,36,0	0/0:21,0:21:53.97:0,54,469	0/0:19,0:19:50.99:0,51,443	0/0:25,0:25:56.94:0,57,487	0/0:15,0:15:38.98:0,39,339
chr10	109000482	.	AT	A	6488.36	PASS	AB=0.591;AC=33;AF=0.589;AN=56;BaseQRankSum=9.745;DP=545;FS=1.585;HRun=11;HaplotypeScore=57.0827;InbreedingCoeff=0.8965;MQ=75.25;MQ0=1;MQRankSum=-0.983;QD=19.03;ReadPosRankSum=3.847;VQSLOD=5.8540;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:56.93:468,57,0	0/0:13,0:13:36.09:0,36,383	0/0:20,0:18:13.94:0,14,141	0/0:10,0:8:20.22:0,20,167	0/0:33,0:33:93.04:0,93,953	0/0:17,0:18:24.82:0,25,432	0/0:12,0:12:30.08:0,30,320	1/1:9,18:27:53.89:440,54,0	0/0:19,0:19:17.50:0,18,391	0/0:21,2:24:10.85:0,11,521	0/0:21,0:21:57.14:0,57,607	1/1:1,16:17:32.79:270,33,0	1/1:2,14:16:41.93:345,42,0	1/1:2,17:19:10.01:288,10,0	1/1:2,16:18:35.95:295,36,0	0/0:14,0:14:39.06:0,39,404	1/1:2,29:31:83.89:690,84,0	1/1:2,19:22:55.97:449,56,0	0/1:4,9:13:31.03:186,0,31	1/1:2,30:32:86.88:714,87,0	1/1:0,11:11:29.97:246,30,0	1/1:2,19:22:52.95:425,53,0	1/1:1,12:13:35.96:296,36,0	1/1:1,7:8:8.99:74,9,0	0/0:18,0:19:48.11:0,48,506	1/1:3,22:27:12.47:465,12,0	1/1:2,24:26:68.92:566,69,0	1/1:4,13:17:32.95:271,33,0
chr10	109001772	.	TC	T	2928.51	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-1.396;DP=555;FS=1.496;HRun=1;HaplotypeScore=120.5617;InbreedingCoeff=0.9913;MQ=85.45;MQ0=0;MQRankSum=-0.806;QD=34.45;ReadPosRankSum=0.937;VQSLOD=3.3910;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.18:0,54,862	0/0:5,0:5:15.01:0,15,212	0/0:20,0:20:52.85:0,53,803	0/0:22,0:22:63.10:0,63,864	1/1:0,24:24:63.21:881,63,0	1/1:0,17:17:51.17:713,51,0	1/1:0,17:17:48.16:671,48,0	0/0:40,0:40:99:0,120,1856	1/1:0,19:19:39.13:545,39,0	0/0:28,0:28:84.28:0,84,1323	0/0:18,0:18:54.17:0,54,834	0/0:18,0:18:54.18:0,54,863	0/0:11,0:11:33.09:0,33,502	0/0:17,0:17:51.17:0,51,811	0/0:27,0:27:81.26:0,81,1272	0/0:30,1:31:51.35:0,51,1396	0/0:27,0:27:78.27:0,78,1237	0/0:20,0:20:60.05:0,60,850	0/0:23,0:23:66.20:0,66,1005	0/0:22,0:22:57.09:0,57,855	0/0:7,0:7:14.94:0,15,182	0/0:23,0:23:66.23:0,66,1050	0/0:9,0:9:27.09:0,27,429	0/0:18,0:18:54.18:0,54,863	1/1:0,8:8:21.07:293,21,0	0/0:26,0:26:78.27:0,78,1245	0/0:22,0:22:66.23:0,66,1052	0/0:18,0:18:54.10:0,54,828
chr10	109002090	.	A	AG	20075.87	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=2.065;DP=592;FS=9.817;HRun=0;HaplotypeScore=116.6239;InbreedingCoeff=0.9916;MQ=70.96;MQ0=2;MQRankSum=-11.046;QD=43.17;ReadPosRankSum=0.957;VQSLOD=3.4896;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:60.20:957,60,0	0/0:4,0:4:12.04:0,12,168	0/0:27,0:23:44.55:0,45,710	0/0:22,0:15:38.83:0,39,490	1/1:1,18:19:57.19:905,57,0	1/1:1,35:36:99:1650,105,0	1/1:2,17:19:54.15:814,54,0	1/1:1,33:34:93.32:1474,93,0	1/1:1,20:21:60.20:957,60,0	0/0:27,0:27:81.27:0,81,1133	0/0:22,0:22:63.21:0,63,874	1/1:6,21:27:72.23:1124,72,0	1/1:1,16:17:48.16:761,48,0	1/1:0,21:22:60.20:957,60,0	1/1:5,17:22:60.19:928,60,0	0/0:22,0:22:63.21:0,63,879	1/1:2,14:16:39.11:597,39,0	1/1:3,10:13:35.44:500,35,0	1/1:1,17:18:54.14:827,54,0	1/1:2,36:38:99:1676,105,0	1/1:4,6:10:21.05:311,21,0	1/1:3,15:18:45.15:717,45,0	1/1:1,11:12:36.12:564,36,0	1/1:0,10:10:24.08:383,24,0	1/1:2,21:23:66.21:1031,66,0	1/1:1,20:21:21.24:917,21,0	1/1:4,29:34:99:1499,99,0	1/1:0,11:11:33.11:527,33,0
chr10	109002112	.	GTT	G	6209.53	PASS	AB=0.804;AC=34;AF=0.607;AN=56;BaseQRankSum=3.337;DP=584;FS=11.505;HRun=13;HaplotypeScore=162.5561;InbreedingCoeff=0.8510;MQ=59.64;MQ0=8;MQRankSum=-7.383;QD=18.16;ReadPosRankSum=1.300;VQSLOD=2.2628;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:23:47.85:455,48,0	0/0:13,0:14:38.21:0,38,475	0/0:49,0:21:26.28:0,26,306	0/1:34,0:13:11.25:11,0,71	0/0:19,0:19:52.46:0,52,429	0/0:27,0:27:68.89:0,69,592	0/0:18,0:18:39:0,39,344	1/1:8,14:22:44.72:431,45,0	0/0:15,0:15:41.67:0,42,350	0/0:26,0:26:72.16:0,72,932	0/0:26,0:28:68.19:0,68,910	1/1:4,16:20:47.87:465,48,0	1/1:2,13:15:42.04:407,42,0	1/1:8,10:18:15.91:300,16,0	1/1:2,20:22:54.08:523,54,0	0/0:24,0:28:74.18:0,74,937	1/1:8,8:16:14.74:145,15,0	0/1:6,11:17:11.18:231,0,11	1/1:6,9:15:26.76:260,27,0	1/1:8,17:25:59.89:580,60,0	1/1:4,7:11:14.96:145,15,0	1/1:1,19:20:50.96:493,51,0	1/1:2,7:9:20.95:203,21,0	1/1:4,10:14:29.98:282,30,0	0/0:18,0:18:44.98:0,45,388	1/1:9,10:19:29.72:290,30,0	1/1:5,30:35:86.97:843,87,0	1/1:2,5:7:14.92:145,15,0
chr10	109002117	.	T	TTTG	4704.50	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-5.637;DP=584;FS=5.228;HRun=0;HaplotypeScore=179.2066;InbreedingCoeff=0.8846;MQ=64.99;MQ0=8;MQRankSum=-3.332;QD=35.91;ReadPosRankSum=1.886;VQSLOD=5.4596;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:56.04:0,56,487	0/0:14,0:14:37.53:0,38,566	0/0:53,0:24:31.59:0,32,460	0/1:36,0:15:25.57:26,0,114	1/1:3,17:21:54.04:913,54,0	1/1:7,19:26:78.11:1306,78,0	1/1:3,13:16:42.03:756,42,0	0/0:24,0:24:64.66:0,65,519	1/1:4,12:16:48.10:811,48,0	0/0:27,0:27:78.82:0,79,1066	0/0:30,0:30:86.22:0,86,1201	0/0:18,0:18:53.68:0,54,497	0/0:15,0:15:45:0,45,431	0/0:18,0:18:44.34:0,44,378	0/0:20,0:20:54.02:0,54,515	0/0:29,0:29:83.96:0,84,1059	0/0:14,0:14:26.81:0,27,222	0/0:16,0:18:38.42:0,38,286	0/0:15,0:15:37.66:0,38,267	0/0:24,0:24:67.69:0,68,582	0/0:10,0:10:20.89:0,21,181	0/0:20,0:20:56.83:0,57,520	0/0:9,0:9:23.88:0,24,225	0/0:13,0:13:32.63:0,33,259	1/1:1,15:16:45.14:892,45,0	0/0:17,0:17:41.33:0,41,339	0/0:37,0:37:98.66:0,99,916	0/0:7,0:7:20.79:0,21,179
chr10	109003184	.	AT	A	3453.12	PASS	AB=0.964;AC=35;AF=0.625;AN=56;BaseQRankSum=1.960;DP=324;FS=2.131;HRun=9;HaplotypeScore=82.2553;InbreedingCoeff=0.8605;MQ=77.99;MQ0=3;MQRankSum=-5.614;QD=18.97;ReadPosRankSum=0.227;VQSLOD=3.9752;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:11:29.97:266,30,0	0/0:3,0:3:6.02:0,6,69	0/1:24,1:16:16.90:17,0,162	0/0:30,0:18:25.86:0,26,187	0/0:13,0:13:36.11:0,36,415	0/0:12,0:12:36.04:0,36,389	0/0:6,0:6:15.03:0,15,163	1/1:4,19:23:57.01:517,57,0	0/0:13,0:13:27.05:0,27,297	0/0:15,0:15:45.12:0,45,504	0/0:15,0:15:42.11:0,42,475	1/1:0,4:4:9:81,9,0	1/1:0,5:5:12.01:109,12,0	1/1:1,5:6:15:134,15,0	1/1:1,5:6:11.96:101,12,0	0/0:18,0:18:48.14:0,48,554	1/1:1,6:7:20.99:186,21,0	1/1:2,10:12:27.01:244,27,0	1/1:4,10:14:29.98:266,30,0	1/1:2,13:15:44.89:391,45,0	1/1:0,3:3:9:82,9,0	1/1:3,7:10:23.97:212,24,0	1/1:0,10:11:32.89:289,33,0	1/1:0,3:3:5.90:43,6,0	0/0:17,0:17:41.34:0,41,457	1/1:4,5:9:19.24:165,19,0	1/1:3,5:8:17.98:159,18,0	1/1:1,7:8:21.01:192,21,0
chr10	109003213	.	CCT	C	1700.37	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-2.139;DP=410;FS=12.754;HRun=0;HaplotypeScore=93.4838;InbreedingCoeff=0.8744;MQ=71.19;MQ0=8;MQRankSum=2.933;QD=26.16;ReadPosRankSum=0.622;VQSLOD=3.8697;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:11.21:0,11,240	0/0:5,0:5:15:0,15,209	0/0:36,0:18:16.74:0,17,360	0/0:42,0:17:10.23:0,10,240	1/1:4,13:18:43.81:478,44,0	1/1:10,5:15:19.43:469,19,0	1/1:3,5:9:23.42:298,23,0	0/0:28,0:28:45.83:0,46,771	1/1:4,7:11:14.97:176,15,0	0/0:19,0:18:54.12:0,54,865	0/0:19,0:18:44.26:0,44,759	0/0:6,0:6:13.24:0,13,166	0/0:10,0:10:8.79:0,9,225	0/0:7,0:7:18.95:0,19,300	0/0:6,0:6:17.55:0,18,209	0/0:19,0:19:51.14:0,51,837	0/0:11,0:11:11.56:0,12,287	0/0:11,0:11:13.89:0,14,248	0/0:19,0:19:49.45:0,49,564	0/0:20,0:20:32.40:0,32,554	0/0:2,0:2:1.65:0,2,45	0/0:12,0:11:23.41:0,23,238	0/0:17,0:16:33.66:0,34,321	0/0:9,0:9:8.77:0,9,83	1/1:8,4:12:31.91:452,32,0	0/0:16,0:16:39.04:0,39,484	0/0:7,0:7:17.99:0,18,228	0/0:11,0:11:18.18:0,18,311
chr10	109003563	.	GT	G	12095.33	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-4.931;DP=758;FS=0.927;HRun=6;HaplotypeScore=89.2197;InbreedingCoeff=0.9993;MQ=76.98;MQ0=0;MQRankSum=-2.627;QD=25.41;ReadPosRankSum=3.142;VQSLOD=4.9082;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,34:37:81.20:870,81,0	0/0:19,0:19:57.14:0,57,704	0/0:37,0:32:40.33:0,40,725	0/0:18,0:14:33.38:0,33,358	0/0:33,0:33:96.29:0,96,1213	0/0:24,0:23:69.21:0,69,876	0/0:32,0:32:81.25:0,81,1027	1/1:4,29:33:87.15:892,87,0	0/0:32,0:32:96.29:0,96,1208	0/0:22,0:22:60.19:0,60,766	0/0:15,0:15:42.09:0,42,491	1/1:1,12:13:20.93:225,21,0	1/1:0,17:17:42.11:450,42,0	1/1:2,21:23:66.06:693,66,0	1/1:2,37:39:93.18:979,93,0	0/0:33,0:33:91.48:0,91,1113	1/1:1,31:32:84.21:902,84,0	1/1:2,15:17:33.08:355,33,0	1/1:5,19:24:57.10:585,57,0	1/1:3,32:35:93.08:954,93,0	1/1:2,35:37:93.23:999,93,0	1/1:2,21:23:51.13:548,51,0	1/1:1,21:22:48.10:505,48,0	1/1:1,26:27:57.14:612,57,0	0/0:17,0:17:51.15:0,51,635	1/1:4,31:35:56.99:914,57,0	1/1:3,42:45:99:1224,114,0	1/1:1,16:17:36.09:387,36,0
chr10	109004996	.	CGCTCTA	C	13491.43	PASS	AB=0.710;AC=42;AF=0.750;AN=56;BaseQRankSum=8.615;DP=463;FS=6.071;HRun=0;HaplotypeScore=117.9339;InbreedingCoeff=0.7879;MQ=56.32;MQ0=11;MQRankSum=-12.178;QD=41.38;ReadPosRankSum=1.448;VQSLOD=4.1715;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,23:29:51.13:1113,51,0	0/0:10,0:10:30.10:0,30,1045	0/0:37,0:18:45.12:0,45,1341	0/0:37,0:14:36.45:0,36,961	1/1:4,16:20:39.13:847,39,0	1/1:2,12:14:27.09:616,27,0	1/1:2,12:14:21:413,21,0	0/1:8,2:8:99:125,0,147	1/1:0,15:13:33.11:751,33,0	0/0:24,0:24:60.19:0,60,1983	0/0:13,0:13:36.12:0,36,1187	1/1:3,15:18:42.08:906,42,0	1/1:0,6:6:18.06:411,18,0	1/1:1,12:12:24.08:548,24,0	1/1:1,12:12:30.10:668,30,0	0/0:16,0:16:42.14:0,42,1463	1/1:6,13:19:36.12:804,36,0	1/1:2,7:9:18.06:411,18,0	1/1:2,8:8:18.04:367,18,0	1/1:2,17:20:48.08:1039,48,0	1/1:3,10:12:11.94:242,12,0	1/1:3,13:16:27.09:616,27,0	1/1:2,16:18:35.47:813,35,0	1/1:3,9:12:9.03:205,9,0	1/1:3,13:16:30.06:620,30,0	0/1:5,12:17:68.47:716,0,68	1/1:3,15:17:39.13:889,39,0	1/1:0,6:6:18.06:375,18,0
chr10	109005432	.	TC	T	7064.94	PASS	AB=1.000;AC=45;AF=0.865;AN=52;BaseQRankSum=3.468;DP=410;FS=5.693;HRun=2;HaplotypeScore=55.4244;InbreedingCoeff=0.8569;MQ=41.25;MQ0=36;MQRankSum=-3.426;QD=18.79;ReadPosRankSum=2.533;VQSLOD=4.7772;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,21:25:42.09:518,42,0	0/0:10,0:10:30.09:0,30,404	./.	./.	1/1:5,16:20:35.95:401,36,0	1/1:4,11:15:26.87:292,27,0	1/1:5,4:6:9.03:114,9,0	1/1:5,10:15:30.05:368,30,0	1/1:3,14:16:27.09:346,27,0	0/0:14,0:12:33.02:0,33,374	0/0:10,0:9:23.98:0,24,295	1/1:1,11:11:27.09:345,27,0	1/1:0,6:6:6.01:77,6,0	1/1:3,15:17:36.05:430,36,0	1/1:5,9:12:15.05:192,15,0	0/1:14,0:13:0.50:0,0,273	1/1:6,21:24:33.11:422,33,0	1/1:8,9:11:23.82:258,24,0	1/1:2,13:15:39.07:467,39,0	1/1:3,16:18:29.96:313,30,0	1/1:2,11:11:17.99:209,18,0	1/1:1,12:13:32.65:339,33,0	1/1:3,11:14:17.95:191,18,0	1/1:2,10:11:18.06:230,18,0	1/1:3,15:17:30.10:384,30,0	1/1:5,17:20:51.15:630,51,0	1/1:8,15:23:23.15:306,23,0	1/1:4,8:8:18.06:232,18,0
chr10	109007278	.	C	CTT	4774.74	PASS	AB=0.689;AC=39;AF=0.696;AN=56;BaseQRankSum=1.019;DP=588;FS=1.084;HRun=14;HaplotypeScore=90.8789;InbreedingCoeff=0.3837;MQ=62.77;MQ0=2;MQRankSum=-0.342;QD=9.61;ReadPosRankSum=-0.099;VQSLOD=3.4690;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:33:31.44:128,31,0	0/0:12,0:13:11.79:0,12,142	0/0:29,0:14:12.68:0,13,145	0/1:15,0:10:19.53:20,0,41	1/1:9,14:26:41.37:443,41,0	1/1:9,2:15:5.97:49,6,0	1/1:11,7:23:29.30:243,29,0	0/1:9,1:28:22.80:193,0,23	1/1:6,10:19:41.41:467,41,0	0/0:23,0:24:41.37:0,41,337	0/0:10,0:10:20.90:0,21,176	1/1:8,8:18:26.31:305,26,0	1/1:10,9:18:27.09:292,27,0	1/1:14,12:29:38.39:437,38,0	1/1:4,13:23:10.11:351,10,0	0/0:15,0:15:26.70:0,27,225	1/1:8,1:31:17.26:160,17,0	0/1:8,2:20:55.24:78,0,55	0/1:12,0:21:53.01:53,0,58	1/1:5,0:16:9.07:59,9,0	0/1:8,1:19:23.44:80,0,23	1/1:12,6:18:18.06:230,18,0	1/1:9,3:13:14.28:133,14,0	1/1:8,13:31:34.95:574,35,0	1/1:12,7:24:12.88:276,13,0	0/1:10,1:22:17.30:118,0,17	1/1:7,1:23:7.79:76,8,0	0/1:3,0:8:2.74:9,0,3
chr10	109007778	.	TC	T	2886.78	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-0.502;DP=581;FS=3.022;HRun=2;HaplotypeScore=61.4053;InbreedingCoeff=0.9379;MQ=71.42;MQ0=23;MQRankSum=-0.994;QD=15.04;ReadPosRankSum=-0.980;VQSLOD=3.0156;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:26,1:26:60.02:447,60,0	0/0:9,0:9:2.62:0,3,117	0/0:56,0:18:31.26:0,31,291	0/0:68,0:22:45.03:0,45,331	0/0:13,0:13:32.86:0,33,263	0/0:24,0:24:60.33:0,60,421	0/0:23,0:22:40.36:0,40,308	1/1:22,1:24:45.83:364,46,0	0/0:6,0:5:11.90:0,12,104	0/0:26,0:25:50.13:0,50,461	0/0:11,0:11:22.84:0,23,220	0/0:18,0:17:43.21:0,43,365	0/0:18,0:17:30.84:0,31,235	0/0:18,0:18:47.81:0,48,395	0/0:10,0:10:23.93:0,24,197	0/0:17,0:17:35.46:0,35,376	1/1:25,2:27:54.63:415,55,0	1/1:13,1:15:32.95:290,33,0	1/1:4,15:18:45.31:343,45,0	1/1:9,1:12:26.34:191,26,0	1/1:12,1:13:33.42:290,33,0	0/0:16,0:16:40.18:0,40,310	0/0:14,0:14:38.70:0,39,268	0/0:25,0:25:50.21:0,50,370	0/0:17,0:17:43.48:0,43,313	1/1:24,1:22:2.77:388,3,0	1/1:15,0:16:26.92:246,27,0	1/1:8,1:8:16.47:127,16,0
chr10	109009037	.	TAC	T	169.92	PASS	AB=1.000;AC=24;AF=0.800;AN=30;BaseQRankSum=0.349;DP=462;FS=0.000;HRun=0;HaplotypeScore=63.7709;InbreedingCoeff=-0.0834;MQ=56.70;MQ0=22;MQRankSum=-0.611;QD=0.74;ReadPosRankSum=0.262;VQSLOD=1.1162;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/1:4,0:4:24.03:24,0,37	./.	./.	0/1:8,0:6:0:0,0,0	./.	1/1:28,0:28:2.84:14,3,0	./.	1/1:24,0:27:2.84:14,3,0	0/1:18,0:17:16.73:17,0,50	0/1:10,0:10:14.91:53,0,15	./.	./.	./.	1/1:13,0:13:2.98:22,3,0	1/1:14,7:19:4.97:37,5,0	0/0:16,0:15:2.04:0,2,6	1/1:10,0:11:2.84:14,3,0	1/1:11,0:12:2.84:14,3,0	./.	1/1:22,0:23:2.80:13,3,0	1/1:12,0:14:2.58:14,3,0	./.	1/1:28,0:27:2.84:14,3,0	1/1:10,0:11:2.84:14,3,0	./.	./.	./.
chr10	109009950	.	CTATG	C	2918.62	PASS	AB=0.813;AC=14;AF=0.269;AN=52;BaseQRankSum=1.380;DP=692;FS=5.735;HRun=0;HaplotypeScore=131.4697;InbreedingCoeff=0.6232;MQ=61.42;MQ0=7;MQRankSum=4.141;QD=11.96;ReadPosRankSum=1.562;VQSLOD=2.6197;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:20.92:0,21,458	0/0:7,0:7:21.07:0,21,490	./.	./.	1/1:29,8:37:48.13:710,48,0	1/1:18,7:24:33.11:493,33,0	0/1:12,7:19:0.94:41,0,1	0/0:36,0:34:12.75:0,13,82	1/1:19,9:28:36.12:543,36,0	0/0:37,0:37:51.18:0,51,1190	0/0:22,0:22:36.11:0,36,796	0/0:22,0:22:33.10:0,33,695	0/0:28,0:28:51.16:0,51,1056	0/0:19,0:27:50.65:0,51,797	0/0:21,0:21:33.11:0,33,754	0/1:18,8:26:99:102,0,572	0/0:15,0:18:24.06:0,24,411	1/1:18,1:18:6.49:88,6,0	0/0:25,0:23:18.02:0,18,328	0/0:24,1:25:5.04:0,5,1010	0/1:30,1:30:7.09:7,0,578	0/0:21,0:21:45.10:0,45,865	0/0:25,0:27:27.07:0,27,438	0/0:21,0:21:30.09:0,30,631	1/1:17,12:29:51.17:783,51,0	0/1:22,8:29:99:327,0,467	0/0:26,0:25:42.12:0,42,887	0/0:15,0:14:14.97:0,15,294
chr10	109010005	.	T	TC	1051.30	PASS	AB=0.903;AC=13;AF=0.232;AN=56;BaseQRankSum=11.039;DP=739;FS=4.366;HRun=0;HaplotypeScore=162.3564;InbreedingCoeff=-0.2966;MQ=52.28;MQ0=9;MQRankSum=-8.907;QD=3.23;ReadPosRankSum=-6.607;VQSLOD=0.7248;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,5:22:16.59:17,0,224	0/0:12,0:12:36.11:0,36,489	0/0:45,0:26:71.69:0,72,966	0/0:22,0:14:42.14:0,42,587	0/0:27,0:27:46.21:0,46,663	0/1:21,0:20:23.16:23,0,332	0/1:20,0:17:16.11:16,0,235	0/0:35,0:32:96.29:0,96,1316	0/1:34,0:34:66.22:66,0,528	0/0:42,0:42:99:0,120,1679	0/0:33,0:33:89.66:0,90,1224	0/0:23,0:23:62.83:0,63,686	0/0:27,0:27:56.87:0,57,804	0/0:34,0:34:55.44:0,55,632	0/1:28,0:28:99:261,0,447	0/0:32,0:32:81.26:0,81,1115	0/1:14,6:20:55.28:55,0,136	0/0:10,4:13:16.27:0,16,243	0/1:19,0:18:80.25:80,0,573	0/1:26,6:31:12.23:12,0,768	0/1:14,1:14:8.90:9,0,400	0/0:21,0:21:22.45:0,22,603	0/0:20,0:19:49.17:0,49,430	0/0:26,1:27:34.06:0,34,530	0/1:29,0:29:99:108,0,666	0/1:31,10:40:99:361,0,963	0/1:23,11:27:99:127,0,571	0/1:6,2:7:67.69:68,0,149
chr10	109012983	.	TTTTTTTTC	T	804.90	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=3.303;DP=547;FS=23.277;HRun=0;HaplotypeScore=124.7008;InbreedingCoeff=0.3717;MQ=48.65;MQ0=15;MQRankSum=0.156;QD=5.19;ReadPosRankSum=-3.098;VQSLOD=0.2163;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:47:49.31:0,49,1832	0/0:8,0:7:21.02:0,21,328	0/0:11,0:7:17.93:0,18,335	./.	1/1:17,0:16:17.10:115,17,0	1/1:12,1:13:8.74:148,9,0	1/1:27,5:30:41.04:594,41,0	0/0:24,0:22:46.04:0,46,930	0/1:9,0:9:18.06:18,0,464	0/0:23,0:22:60.13:0,60,1117	0/0:18,0:18:43.64:0,44,887	0/1:20,0:20:6.08:6,0,902	0/0:14,0:13:27.42:0,27,509	0/0:11,0:11:3.72:0,4,629	0/0:17,0:17:26.29:0,26,969	0/0:17,0:14:39.13:0,39,1039	0/0:31,0:31:3.75:0,4,1258	0/1:27,0:27:29.63:30,0,838	0/1:21,0:19:37.22:37,0,581	0/0:22,0:22:10.44:0,10,697	0/0:14,0:14:30.42:0,30,509	0/0:16,0:16:21.14:0,21,919	0/1:16,0:15:14.14:14,0,498	0/0:28,0:28:30.79:0,31,993	0/0:27,0:26:53.72:0,54,1601	0/0:25,0:23:37.26:0,37,1161	0/0:22,0:19:45.98:0,46,895	0/0:11,0:10:14.27:0,14,284
chr10	109012984	.	TTTTTTTC	T	890.71	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=3.675;DP=541;FS=35.892;HRun=0;HaplotypeScore=114.0549;InbreedingCoeff=0.1135;MQ=47.65;MQ0=15;MQRankSum=0.074;QD=3.76;ReadPosRankSum=-0.896;VQSLOD=0.0931;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:46:44.58:0,45,1420	0/0:8,0:7:20.94:0,21,270	0/0:10,0:6:14.54:0,15,269	./.	1/1:2,14:15:20.66:134,21,0	1/1:3,9:12:9.03:149,9,0	1/1:28,0:26:57.80:549,58,0	0/0:23,0:21:45.13:0,45,714	0/1:9,0:9:18.15:18,0,377	0/0:23,0:22:60.07:0,60,928	0/0:20,0:20:49.10:0,49,794	0/1:19,0:19:26.83:27,0,757	0/0:14,0:13:23.99:0,24,411	0/1:12,0:12:18.99:19,0,493	0/0:18,0:18:4.93:0,5,783	0/0:18,0:15:42.12:0,42,884	0/1:32,0:32:27.36:27,0,957	0/1:27,0:27:33.48:33,0,619	0/1:21,0:19:49.38:49,0,395	0/1:21,0:21:15.66:16,0,503	0/0:14,0:14:15.20:0,15,380	0/0:16,0:16:19.95:0,20,714	0/1:15,0:14:15.18:15,0,372	0/0:28,0:28:16.52:0,17,769	0/0:27,0:26:53.13:0,53,1324	0/1:25,0:24:21:21,0,847	0/0:22,0:19:43.39:0,43,686	0/0:11,0:10:0.76:0,1,196
chr10	109014644	.	TAACAAA	T	5697.56	PASS	AB=0.985;AC=13;AF=0.232;AN=56;BaseQRankSum=12.367;DP=626;FS=15.228;HRun=0;HaplotypeScore=177.5690;InbreedingCoeff=-0.0916;MQ=70.13;MQ0=1;MQRankSum=-14.385;QD=21.10;ReadPosRankSum=7.008;VQSLOD=3.1906;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:94.04:0,94,1085	0/0:7,0:7:17.98:0,18,357	0/0:36,0:21:42.21:0,42,486	0/0:29,0:17:21.69:0,22,292	0/1:33,0:33:53.76:635,0,54	0/1:19,0:19:51.59:332,0,52	0/1:18,1:19:41.73:418,0,42	0/0:26,0:27:55.31:0,55,567	0/1:18,1:19:22.47:471,0,22	0/0:16,0:16:45.12:0,45,835	0/0:21,0:21:59.38:0,59,1244	0/1:13,0:13:31.49:296,0,31	0/1:31,1:32:54.62:835,0,55	0/1:22,0:22:10.65:489,0,11	0/1:35,0:35:27.37:669,0,27	0/0:25,0:25:72.12:0,72,1483	0/0:22,0:23:40.59:0,41,343	0/0:22,0:22:58.58:0,59,565	0/0:11,0:11:30.03:0,30,295	0/0:23,0:23:53.07:0,53,502	0/0:12,0:12:29.48:0,29,324	0/1:28,1:29:49.11:729,0,49	1/1:10,0:10:20.97:253,21,0	0/1:12,0:12:71.99:72,0,79	0/1:27,0:27:30.78:499,0,31	0/0:22,0:23:58.96:0,59,581	0/0:33,0:31:75.96:0,76,789	0/0:10,0:10:14.61:0,15,147
chr10	109014647	.	CAAAAAA	C	8749.16	PASS	AB=0.632;AC=23;AF=0.411;AN=56;BaseQRankSum=3.791;DP=633;FS=9.175;HRun=17;HaplotypeScore=169.5356;InbreedingCoeff=0.9336;MQ=66.28;MQ0=2;MQRankSum=-12.723;QD=32.28;ReadPosRankSum=6.021;VQSLOD=1.9466;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:42:97.62:0,98,1021	0/0:4,0:5:15.05:0,15,326	0/0:35,0:19:38.75:0,39,509	0/0:31,0:18:14.22:0,14,199	1/1:7,26:34:55.48:1003,55,0	1/1:4,11:18:21.51:578,22,0	1/1:6,14:20:17.38:603,17,0	0/0:11,0:26:21.32:0,21,358	1/1:3,14:18:42.07:712,42,0	0/0:19,0:21:48.15:0,48,928	0/0:16,0:22:59.89:0,60,1316	1/1:7,8:16:11.58:434,12,0	1/1:8,22:32:72.05:1201,72,0	1/1:5,14:22:47.77:762,48,0	1/1:5,28:33:68.29:1107,68,0	0/0:25,0:27:66.23:0,66,1621	0/0:7,0:22:28.79:0,29,299	0/0:8,0:22:51.58:0,52,413	0/0:7,0:11:18:0,18,159	0/0:10,0:21:43.80:0,44,396	0/0:6,0:14:31.46:0,31,312	1/1:4,25:30:47.40:1104,47,0	1/1:0,9:9:20.98:358,21,0	0/1:5,7:12:0.71:107,0,1	1/1:2,20:27:8.15:781,8,0	0/0:9,0:22:53.43:0,53,489	0/0:19,0:32:62.46:0,62,572	0/0:2,0:7:13.82:0,14,110
chr10	109018017	.	G	GTTT	3909.78	PASS	AB=0.952;AC=36;AF=0.643;AN=56;BaseQRankSum=-6.172;DP=593;FS=3.112;HRun=16;HaplotypeScore=90.4878;InbreedingCoeff=0.5879;MQ=53.62;MQ0=26;MQRankSum=-0.235;QD=8.48;ReadPosRankSum=-1.619;VQSLOD=-0.0377;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:36,1:36:44.90:530,45,0	0/1:10,0:12:3.44:3,0,37	1/1:26,0:8:0.89:2,1,0	0/1:18,0:10:0:1,0,0	1/1:13,3:28:25.07:307,25,0	1/1:6,8:17:20.41:189,20,0	1/1:14,1:13:19.23:173,19,0	1/1:30,0:30:34.61:316,35,0	1/1:7,0:13:7.72:37,8,0	0/0:23,0:24:16.44:0,16,117	0/0:24,0:22:19.79:0,20,178	0/0:18,0:16:2.88:0,3,36	0/0:11,0:11:7.78:0,8,41	0/0:13,0:14:18.76:0,19,70	0/1:15,0:15:18.63:19,0,20	0/0:12,0:15:16.89:0,17,141	1/1:27,1:25:34.07:344,34,0	1/1:26,0:22:28.95:303,29,0	1/1:21,0:19:30.52:293,31,0	1/1:23,0:23:16.36:200,16,0	1/1:21,0:19:18:201,18,0	0/0:23,0:23:20.98:0,21,106	0/1:22,0:21:2.91:3,0,35	0/1:21,0:20:1.39:1,0,38	0/1:12,7:18:10.59:45,0,11	1/1:25,1:25:49.34:500,49,0	1/1:24,0:23:23.02:394,23,0	1/1:12,0:12:6.64:48,7,0
chr10	109018018	.	T	TTTTG	4497.71	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-0.391;DP=591;FS=16.958;HRun=0;HaplotypeScore=95.5733;InbreedingCoeff=0.5598;MQ=53.23;MQ0=28;MQRankSum=0.786;QD=10.71;ReadPosRankSum=4.561;VQSLOD=2.1933;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:36,1:36:42.71:565,43,0	0/0:11,0:11:25.55:0,26,254	0/0:27,0:8:6.39:0,6,74	0/1:18,0:10:4.78:5,0,7	0/1:27,0:26:68.83:69,0,194	0/0:18,0:17:0.65:0,1,78	0/0:15,0:13:1.05:0,1,88	1/1:28,0:28:65.43:683,65,0	0/0:16,0:13:11.56:0,12,113	0/0:26,0:24:53.97:0,54,554	0/0:24,0:21:45.05:0,45,579	1/1:17,0:15:10.01:48,10,0	0/1:12,0:11:6.18:6,0,19	1/1:14,0:14:0.82:11,1,0	1/1:16,0:16:8.40:73,8,0	0/0:14,0:14:33.02:0,33,407	1/1:29,0:25:36.58:368,37,0	1/1:27,0:23:33.04:387,33,0	1/1:21,0:19:4.89:417,5,0	1/1:24,0:24:27.67:271,28,0	1/1:20,1:19:1.02:214,1,0	1/1:22,0:22:5.94:112,6,0	1/1:22,0:21:2.68:74,3,0	1/1:21,0:20:12.02:67,12,0	0/0:20,0:18:13.93:0,14,213	1/1:25,2:26:16.74:632,17,0	1/1:24,0:23:30.91:367,31,0	1/1:13,0:12:3.81:129,4,0
chr10	109018019	.	T	TTTG	6277.79	PASS	AB=0.989;AC=36;AF=0.643;AN=56;BaseQRankSum=-4.464;DP=595;FS=17.496;HRun=0;HaplotypeScore=82.4337;InbreedingCoeff=0.4675;MQ=53.03;MQ0=29;MQRankSum=2.669;QD=13.68;ReadPosRankSum=5.931;VQSLOD=3.0235;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,25:36:31.36:828,31,0	0/0:10,0:10:25.81:0,26,246	0/0:26,0:8:6.52:0,7,75	0/1:18,0:10:4.99:5,0,14	0/1:27,0:26:58.28:58,0,195	0/1:18,0:17:28.66:29,0,69	0/1:15,0:13:19.94:20,0,102	1/1:4,22:26:65.50:794,66,0	0/0:16,0:13:19.32:0,19,130	0/0:26,0:24:56.97:0,57,567	0/0:24,0:21:50.90:0,51,577	1/1:18,0:16:21.25:93,21,0	0/1:12,0:11:4.38:22,0,4	1/1:14,0:14:21.63:77,22,0	1/1:16,0:16:24.47:132,24,0	0/0:14,0:14:36.02:0,36,417	1/1:10,20:26:36.90:557,37,0	1/1:9,17:24:36.08:571,36,0	1/1:10,12:20:0.31:567,0,0	1/1:7,15:24:15.12:323,15,0	1/1:6,15:20:1.06:272,1,0	1/1:22,0:22:31.78:191,32,0	1/1:22,0:21:23.08:138,23,0	1/1:21,0:20:27.08:131,27,0	0/0:20,0:18:0.08:0,0,217	1/1:10,17:26:16.18:762,16,0	1/1:6,18:25:31.81:564,32,0	0/1:13,1:12:3.43:144,0,3
chr10	109018020	.	T	TTG	4651.88	PASS	AB=0.977;AC=33;AF=0.589;AN=56;BaseQRankSum=-1.474;DP=586;FS=17.352;HRun=0;HaplotypeScore=78.3038;InbreedingCoeff=0.5772;MQ=51.71;MQ0=29;MQRankSum=3.542;QD=11.37;ReadPosRankSum=6.576;VQSLOD=2.9572;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:36,1:36:28.11:430,28,0	0/0:10,0:10:26.94:0,27,250	0/0:26,0:8:6.56:0,7,76	0/1:16,0:8:4.58:5,0,12	0/0:27,0:26:7.45:0,7,218	0/1:18,0:17:12.03:12,0,57	0/0:15,0:13:26.65:0,27,168	1/1:22,1:23:59.30:572,59,0	0/0:16,0:13:10.71:0,11,120	0/0:25,0:23:56.94:0,57,566	0/0:24,0:21:50.89:0,51,541	1/1:18,0:16:23.19:136,23,0	1/1:12,0:11:5.03:50,5,0	1/1:14,0:14:30.65:144,31,0	1/1:14,2:16:30.64:220,31,0	0/0:14,0:14:35.94:0,36,388	1/1:27,3:26:35.03:365,35,0	1/1:26,2:24:31.36:360,31,0	0/1:20,1:19:27.54:363,0,28	1/1:21,3:24:4.43:241,4,0	1/1:18,1:17:1.10:166,1,0	1/1:21,1:22:46.74:288,47,0	1/1:20,1:21:40.85:228,41,0	1/1:20,1:20:31.46:211,31,0	0/0:20,0:18:25.86:0,26,243	0/1:24,2:25:5.17:458,0,5	1/1:27,0:26:31.50:290,31,0	0/1:15,0:13:19.25:113,0,19
chr10	109018021	.	T	TG	4259.30	PASS	AB=0.989;AC=29;AF=0.518;AN=56;BaseQRankSum=-2.038;DP=582;FS=15.176;HRun=0;HaplotypeScore=70.1356;InbreedingCoeff=0.5450;MQ=51.47;MQ0=29;MQRankSum=2.110;QD=11.03;ReadPosRankSum=6.871;VQSLOD=3.8570;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:37,2:38:20.83:206,21,0	0/0:10,0:10:26.76:0,27,230	0/0:26,0:8:6.40:0,6,75	0/1:16,0:8:4.80:5,0,11	0/0:27,0:26:49.41:0,49,322	0/0:18,0:17:25.85:0,26,150	0/0:15,0:13:32.62:0,33,232	1/1:21,1:22:57.80:378,58,0	0/0:16,0:13:19.12:0,19,136	0/0:26,0:24:56.87:0,57,534	0/0:23,0:20:48.75:0,49,483	1/1:2,16:16:28.90:320,29,0	1/1:2,9:11:11.44:163,11,0	1/1:2,12:14:36.08:405,36,0	1/1:2,13:15:32.88:337,33,0	0/0:16,0:16:30.48:0,30,313	1/1:30,0:26:23.31:158,23,0	1/1:27,0:23:14.95:141,15,0	0/1:21,0:19:77.73:167,0,78	0/1:22,1:23:6.84:143,0,7	0/1:19,0:17:0.10:69,0,0	1/1:2,20:22:57.38:527,57,0	1/1:3,19:21:43.97:402,44,0	1/1:4,16:20:34.15:402,34,0	0/0:19,0:17:29.34:0,29,251	0/1:26,0:25:31.44:206,0,31	0/1:25,1:25:23.92:131,0,24	0/1:13,0:11:22.10:99,0,22
chr10	109019038	.	CT	C	771.49	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.426;DP=555;FS=9.390;HRun=3;HaplotypeScore=101.8949;InbreedingCoeff=0.9881;MQ=74.10;MQ0=3;MQRankSum=-1.655;QD=9.52;ReadPosRankSum=-1.097;VQSLOD=0.2556;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.26:0,87,1170	0/0:9,0:9:27.05:0,27,341	0/0:20,0:18:54.18:0,54,748	0/0:18,0:19:43.60:0,44,595	1/1:12,9:21:34.50:234,35,0	1/1:6,4:10:20.77:154,21,0	1/1:7,12:19:38.40:300,38,0	0/0:34,0:34:93.25:0,93,1271	1/1:1,11:12:14.97:127,15,0	0/0:22,0:22:63.18:0,63,881	0/0:13,0:13:30.10:0,30,423	0/0:18,0:18:51.16:0,51,694	0/0:23,0:23:61.14:0,61,659	0/0:23,0:23:65.43:0,65,731	0/0:20,0:20:42.05:0,42,517	0/0:21,1:22:33.28:0,33,772	0/0:32,0:32:90.08:0,90,1124	0/0:29,0:29:64.72:0,65,894	0/0:20,0:20:59.71:0,60,710	0/0:20,0:20:60.03:0,60,760	0/0:12,0:12:35.71:0,36,471	0/0:13,0:13:39.13:0,39,540	0/0:17,0:17:41.83:0,42,510	0/0:17,0:17:44.72:0,45,573	1/1:3,16:19:12.49:128,12,0	0/0:22,0:22:60.18:0,60,829	0/0:23,0:22:58.54:0,59,772	0/0:13,0:13:39.11:0,39,506
chr10	109019039	.	TTTC	T	1602.35	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=3.405;DP=551;FS=28.580;HRun=0;HaplotypeScore=117.6733;InbreedingCoeff=0.8978;MQ=74.97;MQ0=3;MQRankSum=-3.653;QD=20.03;ReadPosRankSum=-3.661;VQSLOD=1.1720;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.08:0,90,1413	0/0:9,0:9:27.06:0,27,491	0/0:20,0:18:54.18:0,54,1145	0/0:21,0:20:51.16:0,51,838	1/1:11,10:21:41.67:472,42,0	1/1:10,0:10:27.91:347,28,0	1/1:18,1:19:55.83:578,56,0	0/0:33,0:33:93.30:0,93,1623	0/1:11,0:11:5.35:168,0,5	0/0:21,0:21:63.18:0,63,1286	0/0:13,0:13:36.11:0,36,680	0/0:18,0:18:51.17:0,51,857	0/0:23,0:23:61.75:0,62,898	0/0:23,0:23:66.21:0,66,993	0/0:18,0:18:41.94:0,42,678	0/0:21,0:21:23.66:0,24,1191	0/0:32,0:32:90.31:0,90,1436	0/0:29,0:29:69.71:0,70,1106	0/0:22,0:22:65.92:0,66,898	0/0:20,0:20:60.13:0,60,923	0/0:12,0:12:36.10:0,36,582	0/0:13,0:13:39.13:0,39,653	0/0:17,0:17:44.89:0,45,663	0/0:17,0:17:45.15:0,45,748	1/1:19,0:19:23.35:202,23,0	0/0:22,0:22:65.91:0,66,1020	0/0:23,0:22:66.19:0,66,1050	0/0:13,0:13:39.10:0,39,601
chr10	109019043	.	TC	T	7427.03	PASS	AB=0.870;AC=42;AF=0.750;AN=56;BaseQRankSum=-1.077;DP=541;FS=6.636;HRun=10;HaplotypeScore=77.4600;InbreedingCoeff=0.6391;MQ=75.11;MQ0=3;MQRankSum=-1.738;QD=16.11;ReadPosRankSum=4.117;VQSLOD=5.3457;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:31:74.02:631,74,0	0/0:7,0:8:11.10:0,11,157	0/1:20,1:19:0.73:1,0,266	0/0:21,0:20:1.84:0,2,162	0/1:22,0:22:23.20:42,0,23	1/1:12,0:12:9.13:42,9,0	1/1:19,0:19:20.35:95,20,0	1/1:12,17:29:47.94:416,48,0	0/1:11,0:11:6.71:14,0,7	0/0:19,0:19:30.04:0,30,318	0/0:13,0:13:30.08:0,30,328	1/1:4,14:18:38.99:339,39,0	1/1:0,23:23:62.99:547,63,0	1/1:1,22:23:65.99:573,66,0	1/1:1,18:19:41.99:364,42,0	0/0:19,0:19:37.96:0,38,458	1/1:5,27:32:80.98:703,81,0	1/1:12,19:31:25.05:362,25,0	1/1:5,16:22:53.02:447,53,0	1/1:5,12:17:35.94:306,36,0	1/1:1,11:12:35.99:311,36,0	1/1:1,11:12:32.99:287,33,0	1/1:1,15:16:41.99:364,42,0	1/1:4,13:17:8.81:305,9,0	1/1:19,0:19:14.92:56,15,0	1/1:2,19:22:59.02:500,59,0	1/1:4,19:22:59.98:519,60,0	0/1:1,9:10:3.18:204,0,3
chr10	109020049	.	ATGTGTATG	A	2195.31	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=3.087;DP=571;FS=8.213;HRun=0;HaplotypeScore=192.0398;InbreedingCoeff=0.4766;MQ=54.21;MQ0=13;MQRankSum=-2.014;QD=8.68;ReadPosRankSum=2.110;VQSLOD=1.7696;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:29.90:0,30,236	0/0:12,0:12:32.30:0,32,315	0/0:28,0:13:29.99:0,30,283	0/0:32,0:22:40.30:0,40,388	1/1:23,2:25:39.04:379,39,0	1/1:21,2:24:47.28:541,47,0	1/1:18,2:20:25.24:361,25,0	0/0:39,0:36:69:0,69,616	1/1:22,3:25:46.40:694,46,0	0/0:25,0:25:57.29:0,57,1107	0/0:13,0:13:33.07:0,33,606	0/1:25,0:25:18.91:19,0,213	0/1:24,0:21:6.18:6,0,267	0/1:20,0:20:27.70:28,0,183	0/1:28,0:27:19.44:19,0,238	0/0:25,0:25:71.92:0,72,1528	0/0:10,0:10:23.97:0,24,234	0/0:6,0:6:17.90:0,18,135	0/0:25,0:20:10.03:0,10,250	0/0:20,0:20:26.72:0,27,203	0/0:20,0:17:29.36:0,29,234	0/0:17,0:17:17.86:0,18,134	0/0:11,0:11:17.92:0,18,144	0/1:24,0:23:7.84:8,0,123	1/1:17,6:23:26.65:311,27,0	0/0:13,0:12:31.75:0,32,233	0/1:15,0:15:16.37:16,0,151	0/0:2,0:2:5.96:0,6,44
chr10	109020055	.	ATGTGTGTGTGTGTG	A	878.57	PASS	AB=0.876;AC=20;AF=0.435;AN=46;BaseQRankSum=4.669;DP=552;FS=16.385;HRun=0;HaplotypeScore=240.9742;InbreedingCoeff=0.2911;MQ=50.31;MQ0=18;MQRankSum=-3.343;QD=3.34;ReadPosRankSum=1.636;VQSLOD=0.8672;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:14,0:13:21.04:0,21,504	./.	./.	0/0:26,0:26:16.77:0,17,258	0/0:22,0:22:2.05:0,2,122	0/1:17,0:17:7.56:8,0,105	0/0:37,0:34:9.12:0,9,78	0/1:20,0:23:8.47:8,0,180	0/0:28,0:28:54.03:0,54,2037	0/0:13,0:13:27.08:0,27,992	1/1:19,1:24:21.12:308,21,0	0/1:18,0:18:21.94:154,0,22	0/1:13,1:19:1.81:145,0,2	1/1:23,1:29:7.78:114,8,0	0/0:27,0:27:60.19:0,60,2754	0/0:9,0:9:5.04:0,5,38	./.	1/1:23,0:18:5.62:67,6,0	1/1:16,1:18:5.99:50,6,0	0/0:21,0:17:5.96:0,6,44	1/1:16,1:17:2.85:19,3,0	1/1:13,0:12:2.84:24,3,0	0/1:16,7:24:17.91:26,0,18	0/1:20,0:20:7.84:8,0,81	0/0:13,0:12:0.47:0,0,1	1/1:9,1:12:3.01:98,3,0	./.
chr10	109020074	.	TGTGTGTGTGTGTGTGTGTGTGTGTGA	T	1564.60	PASS	AB=1.000;AC=19;AF=0.352;AN=54;BaseQRankSum=2.881;DP=457;FS=7.864;HRun=0;HaplotypeScore=269.7097;InbreedingCoeff=0.3425;MQ=42.69;MQ0=23;MQRankSum=-3.012;QD=7.94;ReadPosRankSum=-4.197;VQSLOD=0.8948;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:14:0:0,0,0	0/0:9,0:8:21.07:0,21,1306	./.	0/0:12,0:4:6.02:0,6,98	0/0:28,0:28:35.93:0,36,1137	0/0:20,0:19:25.13:0,25,1147	0/0:22,0:22:21.54:0,22,857	1/1:13,15:25:39.07:608,39,0	0/0:23,0:22:34.43:0,34,1470	0/0:25,0:24:63.18:0,63,4018	0/0:14,0:14:33.11:0,33,2131	0/1:21,0:21:65.05:74,0,65	0/1:14,0:11:66.96:67,0,250	0/1:19,0:19:6.85:7,0,299	0/1:23,0:21:33.41:33,0,92	0/0:27,0:27:72.25:0,72,5131	1/1:5,0:3:9:111,9,0	0/0:5,0:4:2.50:0,2,9	1/1:8,6:9:17.63:276,18,0	1/1:23,0:20:14.37:319,14,0	0/1:15,0:10:59.94:60,0,221	0/0:16,0:14:0.34:0,0,44	0/0:14,0:13:9.02:0,9,125	0/0:20,0:19:4.02:0,4,111	0/0:22,0:22:29.96:0,30,865	1/1:8,0:7:2.85:15,3,0	1/1:9,0:9:5.97:155,6,0	0/1:2,0:2:9.98:10,0,38
chr10	109020104	.	TGA	T	657.61	PASS	AB=0.991;AC=14;AF=0.269;AN=52;BaseQRankSum=-0.384;DP=353;FS=2.898;HRun=0;HaplotypeScore=112.9118;InbreedingCoeff=0.3658;MQ=52.35;MQ0=20;MQRankSum=1.488;QD=3.94;ReadPosRankSum=1.662;VQSLOD=2.6108;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/1:7,0:6:8.46:8,0,179	0/0:15,0:6:0.45:0,0,41	0/0:31,0:12:16.20:0,16,174	1/1:19,5:25:23.82:291,24,0	1/1:14,7:21:15.81:132,16,0	1/1:6,13:19:6.02:73,6,0	0/0:20,0:20:20.19:0,20,136	1/1:14,6:19:12.02:134,12,0	0/1:16,0:15:15.19:15,0,420	0/0:9,0:10:19.88:0,20,296	0/0:12,0:12:0.16:0,0,1	0/0:8,0:5:7.24:0,7,65	0/0:9,0:9:1.55:0,2,4	0/0:16,0:14:2.49:0,2,7	0/1:26,1:27:34.82:35,0,693	0/0:5,0:3:5.91:0,6,45	0/0:3,0:2:0.89:0,1,3	0/0:9,0:6:7.10:0,7,38	0/1:11,0:8:0:0,0,0	0/0:6,0:4:2.98:0,3,21	0/0:8,0:6:0:0,0,0	0/0:6,0:5:0:0,0,0	0/0:14,0:13:0.83:0,1,2	1/1:16,5:21:8.49:110,8,0	0/0:2,0:1:2.92:0,3,17	./.	0/0:1,0:1:2.68:0,3,11
chr10	109020119	.	GAGAA	G	63.03	PASS	AB=0.943;AC=13;AF=0.241;AN=54;BaseQRankSum=4.150;DP=379;FS=11.711;HRun=0;HaplotypeScore=116.2537;InbreedingCoeff=0.3803;MQ=56.86;MQ0=21;MQRankSum=-0.721;QD=0.62;ReadPosRankSum=-1.445;VQSLOD=1.4657;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:6:14.66:0,15,367	0/0:36,0:15:19.45:0,19,229	0/0:55,0:17:28.87:0,29,407	0/0:20,1:22:23.83:0,24,185	0/1:18,2:20:59.73:60,0,104	0/0:20,1:21:11.90:0,12,87	0/0:13,0:11:26.71:0,27,272	0/1:21,2:22:42.33:42,0,187	0/0:18,0:17:5.80:0,6,859	0/0:12,0:11:23.43:0,23,548	1/1:11,0:11:0.85:19,1,0	0/0:6,0:5:8.10:0,8,44	1/1:8,0:8:2.14:9,2,0	1/1:15,0:13:4.31:26,4,0	0/0:29,0:29:35.73:0,36,1419	0/0:4,0:2:3.01:0,3,38	1/1:2,0:2:4.99:18,5,0	0/0:7,0:6:15.15:0,15,101	0/1:11,0:8:0:0,0,0	0/0:3,0:2:3.01:0,3,39	0/0:8,0:6:0:0,0,0	0/0:6,0:5:0:0,0,0	1/1:11,0:10:2.81:17,3,0	0/0:19,0:19:6.02:0,6,85	0/0:2,0:1:2.92:0,3,17	0/0:3,0:3:0.47:0,0,1	0/0:1,0:1:3:0,3,28
chr10	109020121	.	GAA	G	394.51	PASS	AB=0.969;AC=24;AF=0.480;AN=50;BaseQRankSum=2.195;DP=376;FS=5.540;HRun=2;HaplotypeScore=108.4034;InbreedingCoeff=0.1611;MQ=57.15;MQ0=21;MQRankSum=1.515;QD=1.72;ReadPosRankSum=3.934;VQSLOD=-0.6986;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:6,0:6:30.45:30,0,246	0/0:38,0:16:20.87:0,21,204	0/0:56,0:17:32.43:0,32,304	1/1:21,1:23:21.59:127,22,0	0/1:18,3:21:51.88:125,0,52	0/1:20,0:20:13.88:14,0,27	0/0:10,0:8:17.71:0,18,131	0/1:19,3:21:46.97:47,0,108	0/1:21,0:20:16.55:17,0,663	0/1:12,0:11:0.07:0,0,349	1/1:10,1:11:1.29:7,1,0	0/0:6,0:5:6.52:0,7,30	1/1:8,0:8:2.45:13,2,0	1/1:15,0:13:3.46:16,3,0	0/1:28,0:28:69.95:70,0,847	0/0:4,0:2:2.94:0,3,18	1/1:2,0:2:4.74:16,5,0	0/0:7,0:6:13.71:0,14,82	0/1:9,0:6:0:0,0,0	1/1:2,0:1:0.47:1,0,0	0/0:8,0:6:0:0,0,0	0/0:6,0:5:0:0,0,0	1/1:11,0:10:1.69:5,2,0	1/1:15,3:18:9.83:45,10,0	./.	./.	0/0:1,0:1:2.60:0,3,10
chr10	109020122	.	AATGTGTGTGT	A	236.23	PASS	AB=1.000;AC=13;AF=0.271;AN=48;BaseQRankSum=4.783;DP=335;FS=1.177;HRun=0;HaplotypeScore=123.6686;InbreedingCoeff=0.3852;MQ=59.66;MQ0=20;MQRankSum=-3.276;QD=4.54;ReadPosRankSum=-1.604;VQSLOD=2.1070;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:6:18.06:0,18,694	0/0:38,0:16:27.90:0,28,799	0/0:56,0:17:34.55:0,35,728	0/0:23,0:23:23.46:0,23,918	0/0:21,0:21:32.63:0,33,824	0/0:20,0:20:11.64:0,12,364	0/1:6,0:4:10.02:10,0,137	0/0:20,0:20:37.40:0,37,855	0/0:20,0:20:57.20:0,57,2491	0/0:12,0:11:27.09:0,27,1236	1/1:6,0:8:3.19:29,3,0	0/1:4,0:3:14.32:59,0,14	0/0:4,0:4:2.81:0,3,29	1/1:8,1:8:5.81:35,6,0	0/0:28,0:28:74.98:0,75,3067	0/0:2,2:2:1.63:0,2,12	1/1:0,1:2:6.02:200,6,0	0/1:5,0:4:14.71:15,0,281	0/0:1,3:4:0.47:0,0,1	0/0:1,1:1:3.01:0,3,87	0/1:5,0:4:0:0,0,0	0/1:3,0:2:0:0,0,0	1/1:9,0:8:3.41:18,3,0	0/0:18,0:18:11.23:0,11,471	./.	./.	./.
chr10	109020138	.	AGT	A	516.18	PASS	AB=0.976;AC=21;AF=0.420;AN=50;BaseQRankSum=2.662;DP=409;FS=1.320;HRun=0;HaplotypeScore=109.8524;InbreedingCoeff=0.1830;MQ=53.82;MQ0=14;MQRankSum=-2.332;QD=2.66;ReadPosRankSum=-2.339;VQSLOD=2.1528;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:7:1.77:0,2,94	0/0:29,0:13:14.92:0,15,134	0/0:60,0:16:11.83:0,12,97	0/0:20,0:20:22.74:0,23,195	0/1:21,2:23:50.12:50,0,152	0/1:24,1:24:54.51:55,0,69	0/1:21,0:18:13.99:108,0,14	0/0:27,0:26:19.02:0,19,259	0/0:19,0:19:29.78:0,30,705	0/0:13,0:12:17.20:0,17,285	0/1:10,0:10:0.17:0,0,0	./.	0/1:4,0:4:0.01:0,0,0	0/0:14,0:13:2.70:0,3,19	0/1:25,0:25:42.65:43,0,599	./.	1/1:5,1:5:3.60:60,4,0	0/1:7,1:6:34.03:39,0,34	1/1:7,2:9:2.50:16,2,0	0/0:5,1:4:2.98:0,3,22	0/1:5,0:4:0:0,0,0	0/1:5,0:5:0:0,0,0	0/1:9,0:9:0.13:0,0,0	0/1:26,1:25:4.86:5,0,161	1/1:6,4:8:4.69:144,5,0	1/1:4,2:6:14.62:103,15,0	1/1:0,1:1:3.01:30,3,0
chr10	109020140	.	T	TGAGAGA	1181.36	PASS	AB=0.927;AC=20;AF=0.417;AN=48;BaseQRankSum=-0.221;DP=423;FS=12.737;HRun=0;HaplotypeScore=130.4933;InbreedingCoeff=0.1690;MQ=55.20;MQ0=15;MQRankSum=-2.746;QD=4.25;ReadPosRankSum=-4.050;VQSLOD=0.1137;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:7:3.01:0,3,53	./.	0/1:61,0:17:0.17:0,0,41	0/1:14,8:26:0:1,0,0	1/1:18,2:23:13.59:231,14,0	0/1:22,2:24:24.24:173,0,24	1/1:21,0:18:24.37:262,24,0	1/1:14,10:26:20.96:475,21,0	0/1:20,0:20:0.21:0,0,412	0/0:10,0:11:17.93:0,18,308	0/0:9,0:9:5.62:0,6,42	1/1:3,0:3:3.01:34,3,0	0/0:4,0:4:2.80:0,3,36	0/0:14,0:13:8.30:0,8,53	0/0:23,0:25:41.86:0,42,772	./.	0/1:6,0:5:12.80:40,0,13	0/1:8,0:6:8.02:30,0,8	0/0:11,0:11:2.48:0,2,12	./.	0/0:4,0:4:2.94:0,3,18	0/0:5,0:5:2.72:0,3,18	0/1:11,0:11:0:0,0,0	0/1:17,1:27:53.43:55,0,53	0/1:10,0:8:3.73:4,0,62	0/1:6,0:6:3.28:3,0,21	1/1:1,0:1:2.74:12,3,0
chr10	109020167	.	GAGAGAGGAC	G	1905.74	PASS	AB=1.000;AC=16;AF=0.348;AN=46;BaseQRankSum=4.073;DP=549;FS=15.226;HRun=0;HaplotypeScore=139.2501;InbreedingCoeff=0.5306;MQ=51.41;MQ0=37;MQRankSum=-2.210;QD=11.55;ReadPosRankSum=-1.739;VQSLOD=1.3960;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:7:16.87:0,17,426	0/1:33,0:12:22.58:23,0,485	0/0:60,0:17:32.78:0,33,559	0/0:32,0:31:36.59:0,37,832	0/0:23,0:23:23.51:0,24,661	0/0:23,0:22:33.45:0,33,931	1/1:32,0:30:39.07:714,39,0	0/0:29,0:29:53.37:0,53,1171	0/0:24,0:24:54.18:0,54,1580	0/0:19,0:19:48.16:0,48,1372	1/1:9,1:10:6.02:104,6,0	1/1:10,0:6:3.01:55,3,0	./.	1/1:15,1:16:5.93:55,6,0	0/0:24,0:24:66.22:0,66,2144	./.	0/0:10,0:8:8.94:0,9,89	1/1:13,0:13:30.06:424,30,0	0/0:14,0:14:3.29:0,3,59	./.	0/0:10,0:8:0:0,0,0	0/1:13,0:13:0.13:0,0,0	./.	0/0:35,0:33:42.07:0,42,1259	0/1:21,0:20:46.20:490,0,46	0/1:9,0:8:47.32:65,0,47	1/1:8,0:3:9.01:133,9,0
chr10	109020171	.	GAGGAC	G	3411.66	PASS	AB=1.000;AC=22;AF=0.478;AN=46;BaseQRankSum=5.992;DP=563;FS=19.629;HRun=0;HaplotypeScore=114.9686;InbreedingCoeff=0.5683;MQ=53.74;MQ0=35;MQRankSum=-4.204;QD=14.22;ReadPosRankSum=-0.641;VQSLOD=1.6855;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:8,0:8:18.06:0,18,416	0/1:34,0:13:18.27:18,0,550	0/0:61,0:20:36.32:0,36,557	0/0:30,0:29:45.15:0,45,970	0/1:23,0:23:44.21:44,0,521	0/0:23,0:22:45:0,45,902	1/1:32,0:31:61.77:1052,62,0	0/1:28,0:28:29.48:29,0,892	0/0:23,0:23:57.17:0,57,1344	0/0:20,0:20:51.17:0,51,1177	1/1:11,0:11:6.02:104,6,0	1/1:9,0:5:3.01:55,3,0	./.	1/1:17,0:17:6.02:73,6,0	0/0:23,0:23:66.14:0,66,1547	./.	1/1:11,0:9:10.05:79,10,0	1/1:13,1:14:39.07:586,39,0	0/0:14,0:14:1.81:0,2,6	./.	0/0:4,7:9:0:0,0,0	0/1:15,0:15:0.17:0,0,0	./.	0/0:33,0:31:41.82:0,42,989	1/1:23,0:22:57.13:965,57,0	1/1:8,1:8:12.04:177,12,0	1/1:14,0:9:12.04:228,12,0
chr10	109020172	.	AG	A	1654.21	PASS	AB=0.990;AC=24;AF=0.522;AN=46;BaseQRankSum=8.435;DP=557;FS=13.867;HRun=2;HaplotypeScore=100.2835;InbreedingCoeff=0.6123;MQ=55.03;MQ0=35;MQRankSum=-3.894;QD=7.19;ReadPosRankSum=0.405;VQSLOD=-0.3694;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:7:19.88:0,20,249	0/0:34,0:13:0.24:0,0,345	0/0:62,0:21:32.89:0,33,382	0/0:29,0:28:45.14:0,45,602	0/1:22,1:23:23.58:24,0,261	0/0:23,0:22:44.42:0,44,534	1/1:31,0:30:49.42:588,49,0	0/1:28,0:28:12.50:12,0,488	0/0:21,0:21:56.67:0,57,747	0/0:20,0:20:50.53:0,51,670	1/1:11,0:11:6.02:70,6,0	1/1:2,7:5:3:29,3,0	./.	1/1:17,0:17:5.65:32,6,0	0/0:23,0:23:64.30:0,64,834	./.	1/1:9,1:8:7.16:54,7,0	1/1:15,0:15:31.81:295,32,0	1/1:13,1:14:3.48:40,3,0	./.	0/1:11,0:9:0:0,0,0	0/1:15,0:15:0.02:0,0,0	./.	0/0:31,0:29:41.55:0,42,532	1/1:22,1:22:56.10:488,56,0	1/1:9,0:8:11.56:84,12,0	1/1:2,12:9:11.86:104,12,0
chr10	109020173	.	GGAC	G	3603.88	PASS	AB=0.837;AC=27;AF=0.563;AN=48;BaseQRankSum=7.052;DP=545;FS=19.302;HRun=0;HaplotypeScore=100.1386;InbreedingCoeff=0.5549;MQ=55.75;MQ0=35;MQRankSum=-3.239;QD=13.20;ReadPosRankSum=-0.658;VQSLOD=1.7123;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:7:18.06:0,18,391	0/1:31,3:13:17.14:17,0,554	0/0:62,0:21:35.90:0,36,546	0/0:29,0:28:48.07:0,48,988	0/1:17,2:19:61.28:61,0,498	0/0:21,2:23:47.93:0,48,878	1/1:1,25:26:62.95:1094,63,0	0/1:23,2:26:46.29:46,0,842	0/0:21,0:21:60.07:0,60,1216	0/0:20,0:20:51.17:0,51,1077	1/1:1,10:11:6.02:104,6,0	1/1:7,0:5:3.01:55,3,0	./.	1/1:3,14:17:6.02:94,6,0	0/0:23,0:23:61.87:0,62,1312	./.	1/1:1,8:8:8.24:116,8,0	1/1:1,12:13:39.08:594,39,0	1/1:2,9:13:2.98:22,3,0	1/1:4,1:16:2.99:24,3,0	0/1:8,1:9:0:0,0,0	0/1:1,14:15:0.02:0,0,0	./.	0/0:25,5:28:41.88:0,42,885	1/1:3,8:23:63.18:966,63,0	1/1:1,7:9:12.04:202,12,0	1/1:13,1:9:12.04:210,12,0
chr10	109020353	.	TTGTC	T	10683.45	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=11.286;DP=787;FS=12.239;HRun=0;HaplotypeScore=155.4449;InbreedingCoeff=0.9107;MQ=63.60;MQ0=5;MQRankSum=-1.219;QD=17.90;ReadPosRankSum=1.144;VQSLOD=4.1130;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,31:48:75.26:1176,75,0	0/0:12,0:12:21.06:0,21,451	0/0:45,0:26:6.02:0,6,110	0/0:42,0:29:5.68:0,6,91	1/1:17,11:28:21.07:329,21,0	1/1:9,13:22:33.11:517,33,0	1/1:11,18:29:39.13:611,39,0	1/1:29,4:32:9.02:120,9,0	1/1:10,25:34:72.25:1129,72,0	0/0:33,0:33:13.66:0,14,1113	0/0:29,0:29:42.14:0,42,971	1/1:10,0:28:42.05:391,42,0	1/1:5,0:27:41.64:373,42,0	1/1:7,0:17:27.03:251,27,0	1/1:18,0:40:48.05:447,48,0	0/0:28,1:29:10.16:0,10,1214	1/1:19,23:42:51.17:800,51,0	1/1:10,9:19:21.07:329,21,0	1/1:20,9:30:30.10:450,30,0	1/1:11,10:21:21.04:303,21,0	1/1:16,22:38:45.14:706,45,0	1/1:9,0:17:21.02:195,21,0	1/1:4,0:15:24.03:223,24,0	1/1:19,0:26:9.01:84,9,0	1/1:4,13:17:30.10:470,30,0	1/1:15,16:31:48.14:716,48,0	1/1:5,16:21:51.17:800,51,0	1/1:4,7:12:18.05:263,18,0
chr10	109020726	.	TAGC	T	21142.51	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=8.997;DP=690;FS=2.485;HRun=0;HaplotypeScore=112.3841;InbreedingCoeff=0.9993;MQ=78.75;MQ0=0;MQRankSum=-7.990;QD=39.52;ReadPosRankSum=7.747;VQSLOD=5.3938;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,35:36:84.29:1372,84,0	0/0:14,0:14:39.13:0,39,871	0/0:24,0:24:69.03:0,69,1357	0/0:28,0:28:75.09:0,75,1442	1/1:1,20:21:39.01:637,39,0	1/1:0,25:25:75.19:1193,75,0	1/1:1,16:17:45.15:735,45,0	1/1:0,27:27:81.25:1273,81,0	1/1:0,21:21:57.19:931,57,0	0/0:33,0:33:87.29:0,87,1871	0/0:24,0:24:66.19:0,66,1341	1/1:1,27:28:69.24:1127,69,0	1/1:1,32:33:84.29:1372,84,0	1/1:1,27:28:72.25:1176,72,0	1/1:0,33:33:87.30:1420,87,0	0/0:32,0:32:90.27:0,90,1885	1/1:1,19:20:39.13:637,39,0	1/1:2,21:23:60.20:980,60,0	1/1:2,12:14:36.12:588,36,0	1/1:1,22:23:54.14:853,54,0	1/1:1,26:27:57.19:917,57,0	1/1:2,22:24:44.98:670,45,0	1/1:0,18:18:51.17:832,51,0	1/1:0,23:23:51.17:833,51,0	1/1:1,15:16:29.95:490,30,0	1/1:3,33:36:32.15:1467,32,0	1/1:1,31:32:78.25:1249,78,0	1/1:0,10:10:24.08:392,24,0
chr10	109022036	.	ACT	A	8005.97	PASS	AB=0.521;AC=18;AF=0.321;AN=56;BaseQRankSum=-0.041;DP=548;FS=2.911;HRun=0;HaplotypeScore=82.4648;InbreedingCoeff=0.8639;MQ=85.64;MQ0=0;MQRankSum=0.434;QD=34.81;ReadPosRankSum=-0.376;VQSLOD=6.4670;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,44:50:99:1527,105,0	0/0:11,0:11:30.10:0,30,551	0/0:22,0:20:48.07:0,48,727	0/0:23,1:23:14.76:0,15,698	0/0:25,0:25:72.25:0,72,1344	0/0:17,0:17:48.15:0,48,850	0/0:16,0:16:45.14:0,45,804	1/1:1,34:35:99:1351,99,0	0/0:16,0:16:39.13:0,39,722	0/0:18,0:18:54.19:0,54,999	0/0:15,0:15:45.15:0,45,827	0/0:19,0:19:51.17:0,51,884	0/0:14,0:14:42.10:0,42,699	0/0:15,0:15:39.13:0,39,685	0/0:22,0:22:66.23:0,66,1181	0/0:17,0:17:48.16:0,48,891	1/1:0,20:20:51.17:748,51,0	0/1:2,17:19:6.66:573,0,7	1/1:2,21:23:63.21:916,63,0	1/1:1,23:24:69.16:960,69,0	1/1:0,12:12:33.11:478,33,0	0/0:8,0:8:21.07:0,21,367	0/0:13,0:13:33.10:0,33,568	0/0:28,0:28:78.25:0,78,1376	0/0:18,0:18:48.16:0,48,877	0/1:1,16:17:4.95:630,0,5	1/1:2,19:21:45.14:648,45,0	1/1:0,9:9:12.04:177,12,0
chr10	109022041	.	G	GT	3068.11	PASS	AB=0.714;AC=14;AF=0.250;AN=56;BaseQRankSum=-12.049;DP=575;FS=0.833;HRun=9;HaplotypeScore=96.4837;InbreedingCoeff=0.8232;MQ=86.54;MQ0=0;MQRankSum=-2.967;QD=21.92;ReadPosRankSum=0.623;VQSLOD=3.8833;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:92.59:0,93,888	0/1:10,2:12:5.03:5,0,176	0/0:25,0:22:42.04:0,42,377	0/0:24,0:24:43.04:0,43,339	0/0:29,0:29:68.95:0,69,597	0/0:20,0:20:38.97:0,39,338	0/0:15,0:15:38.98:0,39,339	0/0:35,0:35:60.65:0,61,531	0/0:18,0:18:35.99:0,36,313	0/0:18,0:18:47.99:0,48,417	0/0:17,0:17:44.93:0,45,380	1/1:2,17:19:51.13:560,51,0	0/1:4,12:16:12.95:326,0,13	1/1:4,13:17:33.09:365,33,0	1/1:1,22:23:63.17:697,63,0	0/0:16,0:16:44.98:0,45,391	0/0:18,0:20:49:0,49,380	0/0:18,1:19:11.76:0,12,313	0/0:28,0:28:36.85:0,37,504	0/0:23,0:23:56.93:0,57,471	0/0:12,0:12:29.96:0,30,248	1/1:0,9:9:21.06:232,21,0	1/1:2,13:15:33.08:356,33,0	1/1:5,24:29:26.01:717,26,0	0/0:18,0:18:35.20:0,35,293	0/0:17,0:17:35.90:0,36,293	0/0:21,0:21:29.51:0,30,344	0/0:9,0:9:11.97:0,12,97
chr10	109022124	.	TTAA	T	3117.57	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.336;DP=640;FS=0.957;HRun=0;HaplotypeScore=100.2594;InbreedingCoeff=0.9918;MQ=86.42;MQ0=1;MQRankSum=-0.672;QD=32.14;ReadPosRankSum=1.695;VQSLOD=3.8095;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,2514	0/0:6,0:6:15.05:0,15,339	0/0:29,0:29:68.34:0,68,1311	0/0:24,0:24:25.98:0,26,1106	1/1:2,22:24:63.06:924,63,0	1/1:1,16:16:33.11:522,33,0	1/1:2,21:23:42.14:699,42,0	0/0:21,0:21:60.18:0,60,1207	1/1:1,13:14:24.08:399,24,0	0/0:37,0:37:99:0,100,2225	0/0:19,0:19:54.17:0,54,1144	0/0:22,0:22:66.19:0,66,1353	0/0:17,0:17:51.07:0,51,1009	0/0:28,0:28:75.26:0,75,1679	0/0:28,0:28:69.15:0,69,1382	0/0:21,0:21:63.20:0,63,1384	0/0:31,0:31:90.25:0,90,1897	0/0:27,0:27:72.22:0,72,1529	0/0:20,0:20:60.17:0,60,1221	0/0:28,0:28:84.21:0,84,1748	0/0:30,0:30:84.29:0,84,1903	0/0:21,0:21:60.05:0,60,1230	0/0:20,0:20:53.75:0,54,1008	0/0:23,0:23:60.13:0,60,1171	1/1:1,18:19:45.15:749,45,0	0/0:28,0:28:78.22:0,78,1600	0/0:16,0:16:45.15:0,45,986	0/0:5,0:5:15.05:0,15,330
chr10	109024315	.	C	CCG	2496.11	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=0.894;DP=317;FS=1.047;HRun=0;HaplotypeScore=64.3657;InbreedingCoeff=0.6614;MQ=55.93;MQ0=9;MQRankSum=0.050;QD=9.28;ReadPosRankSum=-1.087;VQSLOD=3.1690;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:12:26.76:194,27,0	0/0:3,0:3:5.99:0,6,48	0/1:12,0:5:4.71:24,0,5	0/0:12,0:4:5.81:0,6,36	1/1:8,0:8:8.92:64,9,0	1/1:11,0:7:14.95:117,15,0	1/1:4,11:22:5.87:69,6,0	1/1:8,0:8:17.22:95,17,0	1/1:6,0:5:8.86:60,9,0	0/0:13,0:11:14.98:0,15,133	0/0:6,0:6:5.99:0,6,48	1/1:13,0:15:23.91:217,24,0	1/1:10,2:11:26.86:256,27,0	1/1:6,2:6:8.95:68,9,0	1/1:0,6:15:9.02:105,9,0	0/0:14,0:11:8.73:0,9,90	1/1:16,0:16:26.72:186,27,0	1/1:14,0:14:25.20:152,25,0	1/1:3,0:3:5.48:23,5,0	1/1:6,0:6:11.98:99,12,0	1/1:30,0:29:31.97:225,32,0	1/1:0,9:10:2.97:20,3,0	1/1:5,0:5:11.76:83,12,0	1/1:15,1:16:24.01:204,24,0	1/1:8,0:9:8.97:70,9,0	1/1:9,0:7:17.84:124,18,0	1/1:11,0:10:15.84:108,16,0	1/1:7,0:7:11.96:92,12,0
chr10	109025088	.	C	CTTT	1844.67	PASS	AB=0.942;AC=27;AF=0.482;AN=56;BaseQRankSum=-5.873;DP=490;FS=1.507;HRun=18;HaplotypeScore=109.3712;InbreedingCoeff=0.7143;MQ=65.32;MQ0=5;MQRankSum=0.936;QD=7.88;ReadPosRankSum=-0.574;VQSLOD=-0.4129;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:54.30:0,54,241	0/1:11,0:12:12.88:13,0,110	0/0:11,0:7:3.69:0,4,20	0/0:5,0:6:11.60:0,12,67	1/1:19,1:21:32.89:328,33,0	1/1:16,0:15:29.66:298,30,0	1/1:6,1:7:11.13:112,11,0	0/0:30,0:30:32.07:0,32,142	1/1:10,0:11:15.92:172,16,0	0/1:14,0:19:27.42:27,0,56	0/0:19,0:19:0.66:0,1,23	1/1:16,0:15:19.68:76,20,0	1/1:17,0:17:27.61:103,28,0	1/1:12,0:12:15.84:59,16,0	1/1:17,0:16:18.96:60,19,0	0/0:8,0:9:8.45:0,8,73	0/0:33,0:32:65.85:0,66,262	0/0:21,0:20:25.77:0,26,120	0/1:23,0:23:7.57:8,0,84	0/0:27,0:27:42.27:0,42,184	0/0:15,0:15:34.27:0,34,138	1/1:5,0:6:11.42:64,11,0	1/1:20,0:19:25.55:100,26,0	1/1:13,0:13:27.90:117,28,0	1/1:20,4:24:47.29:519,47,0	0/0:10,0:10:19.70:0,20,92	0/0:25,0:24:35.87:0,36,142	0/0:9,0:9:17.76:0,18,70
chr10	109025098	.	T	TC	6716.57	PASS	AB=0.676;AC=41;AF=0.732;AN=56;BaseQRankSum=2.263;DP=535;FS=10.559;HRun=0;HaplotypeScore=79.2017;InbreedingCoeff=0.5365;MQ=62.52;MQ0=18;MQRankSum=0.487;QD=14.66;ReadPosRankSum=9.405;VQSLOD=5.1783;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,34:37:65.10:740,65,0	0/0:9,0:10:19.75:0,20,288	0/0:12,0:6:17.93:0,18,140	0/1:9,0:6:1.40:1,0,70	0/1:8,0:22:31.47:31,0,137	1/1:4,1:15:1.38:65,1,0	0/1:2,0:8:5.44:54,0,5	1/1:6,26:28:77.51:708,78,0	0/1:4,0:11:22.67:23,0,49	0/0:24,0:21:60.71:0,61,508	0/0:21,0:19:52.04:0,52,434	1/1:2,0:16:24.11:101,24,0	1/1:0,0:20:31.97:132,32,0	1/1:2,0:12:0.60:71,1,0	1/1:1,0:16:23.99:102,24,0	0/0:10,0:9:27:0,27,263	1/1:1,32:32:78.22:870,78,0	1/1:3,19:20:42.12:468,42,0	1/1:3,22:24:58.44:631,58,0	1/1:0,25:26:74.33:728,74,0	1/1:5,16:18:39.04:437,39,0	1/1:2,0:8:14.13:75,14,0	1/1:3,0:18:18.67:125,19,0	1/1:2,0:13:30:162,30,0	0/1:8,0:24:19.26:83,0,19	1/1:1,14:14:38.99:376,39,0	1/1:3,24:26:42.02:470,42,0	1/1:0,11:12:24.06:262,24,0
chr10	109025717	.	GCT	G	4636.85	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-3.156;DP=535;FS=7.858;HRun=0;HaplotypeScore=101.0832;InbreedingCoeff=0.9386;MQ=68.18;MQ0=17;MQRankSum=2.083;QD=26.35;ReadPosRankSum=0.573;VQSLOD=6.0213;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:25:69.21:997,69,0	0/0:7,0:7:21.07:0,21,348	0/0:30,0:22:51:0,51,997	0/0:24,0:20:45.19:0,45,984	0/0:19,0:18:40.88:0,41,557	0/0:16,0:15:44.51:0,45,623	0/0:19,0:19:51:0,51,715	1/1:4,20:24:58.13:851,58,0	0/0:22,0:22:64.43:0,64,868	0/0:27,0:26:63.17:0,63,1097	0/0:12,0:12:30.10:0,30,484	0/0:22,0:21:60.20:0,60,994	0/0:22,0:22:54.97:0,55,761	0/0:23,0:23:66.22:0,66,1082	0/0:23,0:21:56.97:0,57,847	0/0:12,0:12:36.09:0,36,572	1/1:17,0:15:31.79:477,32,0	1/1:0,24:24:9.03:129,9,0	1/1:6,0:4:9.03:139,9,0	0/0:1,9:10:1.25:0,1,3	1/1:40,1:37:87.74:1270,88,0	0/0:11,0:11:25.33:0,25,397	0/0:7,0:7:18.06:0,18,298	0/0:32,0:31:71.78:0,72,1066	0/0:21,0:21:58.40:0,58,818	1/1:2,8:8:18.06:270,18,0	1/1:3,13:14:7.26:77,7,0	1/1:10,0:10:30.09:427,30,0
chr10	109025719	.	TTG	T	125.50	PASS	AB=0.980;AC=10;AF=0.263;AN=38;BaseQRankSum=1.473;DP=585;FS=15.969;HRun=0;HaplotypeScore=120.4539;InbreedingCoeff=0.3521;MQ=64.91;MQ0=22;MQRankSum=0.924;QD=0.94;ReadPosRankSum=1.617;VQSLOD=1.2565;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:28:3.47:0,3,27	0/0:8,0:8:3:0,3,25	./.	./.	./.	1/1:16,0:15:2.80:13,3,0	./.	./.	./.	0/0:35,0:33:2.98:0,3,21	1/1:14,0:14:2.98:22,3,0	./.	0/1:23,1:24:48.86:49,0,60	0/0:25,0:25:2.98:0,3,21	1/1:23,3:24:5.21:43,5,0	0/0:13,0:13:17.46:0,17,203	0/0:18,0:16:1.72:0,2,3	0/0:29,0:28:6.90:0,7,73	0/0:10,0:8:3.01:0,3,41	./.	0/0:48,0:42:14.94:0,15,136	./.	0/0:8,0:8:0:0,0,0	1/1:32,1:33:14.58:111,15,0	0/1:19,0:19:0:0,0,0	0/0:14,0:12:2.97:0,3,20	0/0:17,0:15:3.01:0,3,43	0/0:11,0:11:6.48:0,6,66
chr10	109025721	.	G	GC	729.37	PASS	AB=0.986;AC=9;AF=0.161;AN=56;BaseQRankSum=11.532;DP=616;FS=1.066;HRun=0;HaplotypeScore=128.1731;InbreedingCoeff=0.7601;MQ=58.57;MQ0=30;MQRankSum=-4.010;QD=6.95;ReadPosRankSum=0.335;VQSLOD=3.3477;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:30:25.93:0,26,637	0/0:8,0:8:21.07:0,21,290	0/0:26,0:18:54.15:0,54,712	0/0:21,0:17:51.13:0,51,677	1/1:20,1:20:34.55:177,35,0	1/1:15,1:15:36.66:216,37,0	0/1:17,0:17:3.82:135,0,4	0/0:31,0:29:65.89:0,66,564	0/1:21,1:22:1.30:161,0,1	0/0:36,0:34:73.91:0,74,967	0/0:16,0:16:30.09:0,30,399	0/0:24,0:22:60.20:0,60,824	0/0:27,0:26:59.39:0,59,755	0/0:26,0:25:66.18:0,66,909	0/0:28,0:26:51.43:0,51,674	0/0:19,0:18:39.13:0,39,538	0/0:21,0:19:33.98:0,34,381	0/0:29,0:28:11.30:0,11,129	0/0:10,0:8:17.93:0,18,155	0/1:10,0:10:0.02:0,0,0	0/0:53,0:45:90.25:0,90,1066	0/0:11,0:10:12.48:0,12,167	0/0:8,0:8:20.72:0,21,243	0/0:35,0:34:73:0,73,915	1/1:18,1:19:33.63:193,34,0	0/0:18,0:16:25.33:0,25,207	0/0:19,0:17:6.01:0,6,72	0/0:11,0:11:33.10:0,33,399
chr10	109029144	.	GGTAGT	G	27202.40	PASS	AB=0.533;AC=45;AF=0.804;AN=56;BaseQRankSum=11.301;DP=701;FS=8.308;HRun=0;HaplotypeScore=143.6501;InbreedingCoeff=0.8850;MQ=87.81;MQ0=3;MQRankSum=-10.213;QD=47.81;ReadPosRankSum=4.764;VQSLOD=4.3152;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,54:62:99:2538,123,0	1/1:3,7:10:18.06:378,18,0	0/0:36,0:36:87.26:0,87,2521	0/0:25,0:25:66.20:0,66,1904	1/1:5,15:20:42.14:882,42,0	1/1:0,20:20:51.18:1070,51,0	1/1:5,28:33:78.27:1636,78,0	1/1:6,25:31:72.22:1393,72,0	1/1:4,24:27:63.22:1322,63,0	0/0:20,0:20:57.20:0,57,1730	0/0:11,0:11:33.10:0,33,933	1/1:3,20:23:57.20:1196,57,0	1/1:2,15:17:36.12:756,36,0	1/1:3,24:27:60.21:1259,60,0	1/1:3,30:32:81.28:1700,81,0	0/0:40,0:40:99:0,114,3429	1/1:3,32:35:81.28:1700,81,0	1/1:2,26:28:72.25:1511,72,0	1/1:5,11:16:30.08:571,30,0	1/1:2,14:16:42.14:882,42,0	1/1:2,22:23:51.18:1070,51,0	1/1:1,23:24:63.13:1236,63,0	1/1:2,28:30:72.25:1511,72,0	1/1:1,22:23:51.01:941,51,0	1/1:1,13:14:36.12:756,36,0	0/1:3,21:24:26.82:1256,0,27	1/1:1,19:20:51.18:1071,51,0	1/1:0,11:11:27.09:567,27,0
chr10	109030009	.	C	CGG	4144.84	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-11.757;DP=529;FS=7.595;HRun=5;HaplotypeScore=72.2589;InbreedingCoeff=0.9756;MQ=87.34;MQ0=0;MQRankSum=-2.331;QD=41.04;ReadPosRankSum=0.752;VQSLOD=2.6349;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.21:0,66,839	0/0:6,0:6:12.01:0,12,135	0/0:24,0:24:53.40:0,53,752	0/0:20,0:20:42.11:0,42,522	1/1:1,13:14:35.96:629,36,0	1/1:0,20:21:48.16:840,48,0	1/1:3,29:32:84.29:1469,84,0	0/0:14,0:14:42.13:0,42,535	1/1:2,21:23:57.20:997,57,0	0/0:16,0:16:39.10:0,39,484	0/0:14,0:14:42.12:0,42,521	0/0:17,0:17:48.15:0,48,609	0/0:18,0:18:36.10:0,36,458	0/0:30,0:30:69.21:0,69,876	0/0:22,0:22:60.17:0,60,739	0/0:24,0:24:72.23:0,72,916	0/0:25,0:25:69.22:0,69,878	0/0:22,0:22:60.13:0,60,715	0/0:17,0:17:48.15:0,48,611	0/0:9,0:9:21.06:0,21,268	0/0:41,0:41:99:0,105,1302	0/0:16,0:16:45.14:0,45,567	0/0:7,0:7:18.06:0,18,229	0/0:25,0:25:69.22:0,69,878	1/1:1,9:11:12.04:210,12,0	0/0:14,0:14:33.08:0,33,393	0/0:18,0:18:45.13:0,45,559	0/0:5,0:5:12.03:0,12,147
chr10	109032080	.	G	GT	21693.57	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-15.512;DP=740;FS=5.167;HRun=3;HaplotypeScore=66.3685;InbreedingCoeff=0.9975;MQ=85.56;MQ0=0;MQRankSum=-6.751;QD=37.73;ReadPosRankSum=3.848;VQSLOD=5.3701;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,34:37:99:1386,99,0	0/0:9,0:9:21.06:0,21,252	0/0:35,0:36:99:0,99,1187	0/0:32,0:32:81.24:0,81,965	1/1:0,35:35:99:1428,102,0	1/1:0,19:19:54.18:756,54,0	1/1:4,24:28:66.18:902,66,0	1/1:1,40:40:99:1645,120,0	1/1:0,19:19:54.18:756,54,0	0/0:39,0:39:99:0,114,1331	0/0:28,0:28:75.20:0,75,875	1/1:4,25:29:75.25:1046,75,0	1/1:1,24:25:66.22:924,66,0	1/1:0,17:17:45.15:630,45,0	1/1:0,24:24:69.23:966,69,0	0/0:20,1:21:18.16:0,18,642	1/1:3,39:42:84.77:1602,85,0	1/1:1,18:19:45.11:608,45,0	1/1:3,28:31:90.26:1217,90,0	1/1:3,25:28:75.25:1050,75,0	1/1:0,18:18:45.15:630,45,0	1/1:2,21:23:54.18:756,54,0	1/1:1,23:24:66.22:920,66,0	1/1:0,18:18:51.17:714,51,0	1/1:0,19:19:48.16:672,48,0	1/1:1,38:39:99:1535,111,0	1/1:1,28:29:78.26:1091,78,0	1/1:1,10:11:33.11:457,33,0
chr10	109032556	.	G	GTTTTTTTTT	16925.74	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=5.343;DP=553;FS=17.583;HRun=13;HaplotypeScore=184.6633;InbreedingCoeff=0.6774;MQ=58.52;MQ0=1;MQRankSum=-8.740;QD=36.64;ReadPosRankSum=-6.603;VQSLOD=-0.7183;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:29.77:794,30,0	0/0:11,0:11:22.60:0,23,483	0/1:18,0:13:25.60:26,0,54	0/1:8,0:8:27.78:28,0,28	1/1:28,0:33:48.06:1441,48,0	1/1:32,0:32:51.10:1541,51,0	1/1:17,0:17:29.26:812,29,0	1/1:29,0:25:22.10:609,22,0	1/1:10,0:12:3.01:125,3,0	0/0:24,0:25:47.49:0,47,1049	0/0:24,0:28:62.36:0,62,1280	1/1:22,2:27:21.54:842,22,0	1/1:22,0:22:21.54:694,22,0	1/1:9,0:9:18.06:661,18,0	1/1:13,0:13:18.06:567,18,0	0/0:25,0:27:51.69:0,52,1118	1/1:20,0:20:29.13:949,29,0	1/1:13,0:13:12.04:346,12,0	1/1:14,3:18:30.08:871,30,0	1/1:23,0:22:42.13:1296,42,0	1/1:3,0:1:2.22:7,2,0	1/1:23,0:23:35.33:1085,35,0	1/1:15,0:19:29.13:953,29,0	1/1:15,0:15:15.05:335,15,0	1/1:21,0:20:14.08:464,14,0	1/1:24,0:22:31.92:1090,32,0	1/1:13,4:19:22.88:716,23,0	1/1:11,0:14:23.29:674,23,0
chr10	109033158	.	ACTCTTCCAG	A	9025.08	PASS	AB=0.727;AC=19;AF=0.365;AN=52;BaseQRankSum=11.796;DP=352;FS=15.540;HRun=0;HaplotypeScore=99.4059;InbreedingCoeff=0.9047;MQ=39.02;MQ0=49;MQRankSum=-7.827;QD=62.24;ReadPosRankSum=1.378;VQSLOD=3.8935;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,13:12:30.10:968,30,0	0/0:8,0:8:21.07:0,21,849	./.	./.	0/0:17,0:17:42.14:0,42,1826	0/0:17,0:16:48.16:0,48,2077	0/0:14,0:9:24.08:0,24,1211	1/1:7,19:15:45.14:1349,45,0	0/0:15,0:13:29.81:0,30,1343	0/0:13,0:13:39.13:0,39,1916	0/0:16,0:15:42.14:0,42,1874	0/0:14,0:13:36.12:0,36,1679	0/0:10,0:9:18.06:0,18,821	0/0:7,0:6:12.04:0,12,468	0/0:11,0:9:24.07:0,24,966	0/0:9,0:8:18.06:0,18,814	1/1:5,10:9:21.07:685,21,0	1/1:10,11:12:36.08:1076,36,0	1/1:1,7:7:21.07:682,21,0	1/1:0,18:18:45.15:1427,45,0	0/1:5,3:4:56.89:92,0,57	0/0:8,0:8:21.07:0,21,862	0/0:8,0:8:24.08:0,24,957	0/0:24,0:19:54.19:0,54,2606	0/0:15,0:15:42.14:0,42,2046	1/1:1,11:11:33.11:986,33,0	1/1:0,13:13:36.12:1174,36,0	1/1:0,6:6:18.06:587,18,0
chr10	109037850	.	A	AGTGT	6800.31	PASS	AB=0.776;AC=40;AF=0.714;AN=56;BaseQRankSum=-1.778;DP=839;FS=0.551;HRun=0;HaplotypeScore=163.5296;InbreedingCoeff=0.4867;MQ=53.18;MQ0=16;MQRankSum=-1.404;QD=10.24;ReadPosRankSum=-1.505;VQSLOD=4.0394;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,21:45:32.56:604,33,0	0/0:10,0:13:23.94:0,24,330	0/0:40,0:16:3.01:0,3,48	0/0:47,0:14:8.79:0,9,107	1/1:26,0:26:12.14:93,12,0	1/1:26,0:26:17.37:126,17,0	1/1:7,0:40:4.25:38,4,0	1/1:36,0:36:28.68:391,29,0	1/1:7,0:30:5.47:42,5,0	0/0:28,0:30:0.83:0,1,490	0/0:16,0:18:26.44:0,26,374	1/1:14,0:29:6.01:79,6,0	1/1:12,1:26:6.42:351,6,0	0/1:21,0:22:49.62:97,0,50	1/1:13,0:33:17.80:190,18,0	0/0:23,0:27:50.87:0,51,709	1/1:13,26:41:9.33:1246,9,0	1/1:5,9:15:29.84:659,30,0	0/1:23,0:23:60.03:197,0,60	1/1:13,9:24:20.80:444,21,0	1/1:39,17:61:21.06:503,21,0	1/1:11,0:27:2.61:50,3,0	1/1:17,0:17:8.99:74,9,0	1/1:13,1:34:7.56:57,8,0	0/1:10,0:29:0.01:0,0,0	0/1:7,12:24:36.44:712,0,36	1/1:11,12:29:35.06:624,35,0	1/1:17,5:22:9.42:223,9,0
chr10	109037881	.	GAC	G	394.34	PASS	AB=0.827;AC=7;AF=0.125;AN=56;BaseQRankSum=5.604;DP=776;FS=46.470;HRun=0;HaplotypeScore=150.9829;InbreedingCoeff=-0.1387;MQ=54.10;MQ0=24;MQRankSum=-5.157;QD=2.61;ReadPosRankSum=-3.746;VQSLOD=0.0296;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,1:42:21.57:0,22,925	0/0:13,0:13:32.84:0,33,533	0/0:52,0:20:52.17:0,52,753	0/0:69,1:33:59.60:0,60,1235	0/1:11,7:18:24.81:25,0,274	0/1:22,4:26:90.06:90,0,470	0/0:31,0:32:7.72:0,8,628	0/1:30,1:31:99:143,0,1035	0/1:19,3:23:1.44:1,0,371	0/0:33,0:32:29.93:0,30,1430	0/0:19,0:19:48.09:0,48,842	0/0:21,1:21:24.08:0,24,390	0/1:16,3:19:81.80:82,0,327	0/1:13,11:24:99:154,0,431	0/0:27,0:26:40.94:0,41,596	0/0:28,0:29:79.77:0,80,1334	0/0:36,0:36:59.21:0,59,980	0/0:17,0:17:44.70:0,45,578	0/0:26,0:25:10.70:0,11,783	0/0:16,0:14:26.12:0,26,396	0/0:39,0:39:56.13:0,56,811	0/0:24,1:25:29.56:0,30,402	0/0:11,5:16:26.99:0,27,470	0/0:28,0:28:27.79:0,28,420	0/0:23,7:30:29.92:0,30,483	0/0:27,1:28:28.62:0,29,1084	0/0:24,0:24:53.84:0,54,682	0/1:8,2:10:23.88:24,0,107
chr10	109041077	.	GT	G	2362.15	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.257;DP=543;FS=0.000;HRun=8;HaplotypeScore=63.4072;InbreedingCoeff=0.9606;MQ=68.89;MQ0=2;MQRankSum=2.875;QD=22.50;ReadPosRankSum=1.531;VQSLOD=4.0600;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.13:0,81,935	0/0:4,0:4:12.04:0,12,145	0/0:15,0:10:16.42:0,16,181	0/0:10,0:8:12.69:0,13,156	1/1:2,27:29:75.12:724,75,0	1/1:0,21:21:60.10:578,60,0	1/1:3,9:11:27.04:260,27,0	0/0:36,0:36:93.24:0,93,1082	1/1:4,13:17:42.47:395,42,0	0/0:18,0:18:45.11:0,45,509	0/0:24,0:24:60.17:0,60,713	0/0:21,0:21:54.14:0,54,629	0/0:14,0:14:39.12:0,39,471	0/0:9,0:9:21.06:0,21,251	0/0:22,0:22:48.14:0,48,569	0/0:20,1:21:28.22:0,28,588	0/0:33,0:33:96.28:0,96,1148	0/0:30,0:30:81.19:0,81,950	0/0:32,0:32:57.91:0,58,730	0/0:25,0:25:75.19:0,75,865	0/0:9,0:9:18.06:0,18,217	0/0:4,0:4:9.03:0,9,109	0/0:10,0:10:27.06:0,27,305	0/0:7,0:7:12.01:0,12,123	1/1:5,21:26:60.56:579,61,0	0/0:30,0:31:87.11:0,87,1006	0/0:21,0:21:57.14:0,57,664	0/0:13,0:13:33.10:0,33,398
chr10	109043323	.	GGTGTGTGTGTGTGTGT	G	3988.56	PASS	AB=0.852;AC=22;AF=0.440;AN=50;BaseQRankSum=8.696;DP=600;FS=2.368;HRun=0;HaplotypeScore=238.8679;InbreedingCoeff=0.6643;MQ=65.15;MQ0=14;MQRankSum=-5.149;QD=14.35;ReadPosRankSum=0.585;VQSLOD=2.7127;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:40,11:50:8.10:241,8,0	0/0:10,0:11:21.04:0,21,963	./.	0/0:23,0:19:3.01:0,3,37	1/1:18,0:21:6.07:202,6,0	1/1:11,0:21:12.04:447,12,0	./.	0/0:33,0:31:10.39:0,10,100	0/1:15,0:20:99:322,0,139	0/0:15,0:15:25.64:0,26,892	0/0:19,0:18:27.56:0,28,1582	0/0:22,0:20:30.05:0,30,1406	0/0:11,0:13:18.06:0,18,1014	0/0:17,0:17:30.10:0,30,1772	0/0:13,0:15:21.07:0,21,1253	0/0:17,0:17:18.06:0,18,728	1/1:17,11:28:7.75:391,8,0	0/1:17,2:19:99:271,0,203	1/1:18,0:17:1.28:109,1,0	1/1:14,4:19:8.99:264,9,0	./.	0/0:14,0:14:12.51:0,13,634	0/0:13,0:13:15.04:0,15,684	0/0:37,0:39:63.22:0,63,3695	1/1:5,0:14:18.06:670,18,0	1/1:17,9:25:27.03:599,27,0	1/1:21,1:24:9.02:344,9,0	1/1:11,3:13:3.01:131,3,0
chr10	109046983	.	C	CTCT	3905.72	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=8.319;DP=781;FS=4.715;HRun=0;HaplotypeScore=150.8031;InbreedingCoeff=0.4594;MQ=57.12;MQ0=29;MQRankSum=-6.891;QD=11.56;ReadPosRankSum=4.956;VQSLOD=3.2560;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:52:99:0,123,1982	0/0:7,0:7:21.06:0,21,332	0/0:19,0:9:15.87:0,16,185	0/0:21,0:9:11.22:0,11,219	1/1:5,6:11:17.88:263,18,0	1/1:4,15:19:8.11:474,8,0	1/1:4,22:26:35.91:675,36,0	0/0:30,0:28:77.57:0,78,1166	1/1:4,37:42:58.20:1316,58,0	0/0:28,0:26:66.22:0,66,1090	0/0:7,0:7:21.06:0,21,330	0/1:38,0:38:99:156,0,523	0/1:32,0:32:77.34:77,0,530	0/1:30,0:29:28.52:29,0,625	0/1:46,0:45:99:190,0,427	0/0:32,0:32:90.29:0,90,1482	0/0:47,0:46:99:0,102,1711	0/0:26,0:25:55.53:0,56,892	0/0:22,0:17:36.72:0,37,643	0/0:23,0:20:54.18:0,54,875	0/0:53,0:53:99:0,120,1948	0/1:21,0:20:1.77:2,0,394	0/0:10,0:10:4.56:0,5,201	0/1:46,0:45:20.53:21,0,676	1/1:2,19:21:33.99:704,34,0	0/0:35,0:34:99:0,99,1598	0/0:20,0:19:45.09:0,45,754	0/0:6,0:5:15.05:0,15,241
chr10	109046989	.	TTCC	T	6689.12	PASS	AB=0.833;AC=20;AF=0.357;AN=56;BaseQRankSum=-4.034;DP=803;FS=0.785;HRun=0;HaplotypeScore=140.7541;InbreedingCoeff=0.7743;MQ=57.46;MQ0=30;MQRankSum=4.050;QD=19.79;ReadPosRankSum=1.595;VQSLOD=4.7101;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,37:52:69.23:982,69,0	0/0:7,0:7:18.05:0,18,328	0/0:22,0:8:0.93:0,1,147	0/0:22,0:11:1.97:0,2,349	0/0:10,0:9:12:0,12,132	0/0:18,0:17:5.18:0,5,234	0/0:29,0:28:30.44:0,30,327	0/1:14,14:26:47.28:404,0,47	0/0:46,0:44:38.07:0,38,659	0/0:27,0:25:57.18:0,57,1039	0/0:11,0:11:21.05:0,21,355	0/0:13,0:41:44.84:0,45,488	0/0:15,0:38:26.95:0,27,360	0/0:14,0:30:11.26:0,11,160	0/0:12,0:46:52.95:0,53,653	0/0:31,0:31:63.20:0,63,1224	1/1:13,39:51:72.24:1025,72,0	1/1:4,22:25:49.05:684,49,0	1/1:12,8:15:29.99:344,30,0	1/1:7,16:20:41.95:505,42,0	1/1:10,43:53:84.28:1195,84,0	0/0:9,0:19:25.49:0,25,214	0/0:4,0:11:15.05:0,15,114	0/0:19,0:53:19.47:0,19,206	0/1:21,0:20:2.80:3,0,312	1/1:12,21:32:63.19:863,63,0	1/1:5,15:19:33.08:470,33,0	1/1:1,5:5:15.05:214,15,0
chr10	109048409	.	AGTGTGTGT	A	4553.75	PASS	AB=0.792;AC=19;AF=0.452;AN=42;BaseQRankSum=2.258;DP=528;FS=6.145;HRun=0;HaplotypeScore=160.6320;InbreedingCoeff=0.6231;MQ=59.13;MQ0=11;MQRankSum=-8.671;QD=19.89;ReadPosRankSum=0.081;VQSLOD=3.9938;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:8,0:8:8.68:0,9,295	./.	./.	1/1:14,12:27:30.10:746,30,0	1/1:12,5:17:9.03:224,9,0	1/1:11,3:14:8.99:150,9,0	./.	1/1:16,9:26:30.10:727,30,0	0/0:29,0:28:29.31:0,29,737	0/0:17,0:17:14.99:0,15,219	0/1:10,0:16:9.17:9,0,125	0/0:7,0:12:5.68:0,6,66	0/0:13,0:18:14.99:0,15,153	0/0:14,0:24:30.02:0,30,310	0/0:22,0:23:42.10:0,42,1422	1/1:15,3:18:9.03:224,9,0	0/1:14,3:17:38.95:251,0,39	./.	0/1:15,3:20:96.55:288,0,97	./.	0/0:12,0:18:24.46:0,24,227	0/0:7,0:10:6:0,6,51	0/0:12,0:15:11.94:0,12,99	1/1:10,15:26:45.15:1100,45,0	1/1:20,3:23:15.04:328,15,0	1/1:14,9:23:20.85:507,21,0	./.
chr10	109050519	.	T	TAAC	19817.03	PASS	AB=0.504;AC=41;AF=0.732;AN=56;BaseQRankSum=12.501;DP=472;FS=0.376;HRun=0;HaplotypeScore=185.5506;InbreedingCoeff=0.6886;MQ=71.65;MQ0=0;MQRankSum=-14.330;QD=59.16;ReadPosRankSum=7.628;VQSLOD=4.7196;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:15:22.71:825,23,0	0/0:11,0:11:30.10:0,30,570	0/0:33,0:32:90.30:0,90,1583	0/0:28,0:24:69.23:0,69,1242	0/1:1,19:20:99:653,0,116	1/1:0,14:15:44.94:967,45,0	1/1:0,13:13:39.13:843,39,0	1/1:0,16:18:42.60:1137,43,0	1/1:0,17:17:51.18:1130,51,0	0/0:34,0:34:99:0,102,1891	0/0:12,0:12:30.10:0,30,534	1/1:0,18:18:54.19:1229,54,0	1/1:0,18:18:54.18:1188,54,0	1/1:0,11:11:33.11:728,33,0	1/1:1,25:26:78.27:1769,78,0	0/0:19,0:19:54.17:0,54,975	1/1:3,8:11:30.06:573,30,0	1/1:0,9:9:26.96:576,27,0	1/1:2,5:7:21.07:470,21,0	0/1:0,20:20:29.43:911,0,29	1/1:2,6:8:20.94:333,21,0	1/1:0,15:15:21.40:914,21,0	0/1:0,17:17:45.71:783,0,46	1/1:0,10:11:8.53:483,9,0	1/1:1,20:21:62.97:1245,63,0	1/1:1,18:21:63.22:1419,63,0	1/1:0,23:23:69.24:1573,69,0	1/1:0,1:1:3.01:68,3,0
chr10	109050522	.	G	GGGCTAC	34491.29	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=12.283;DP=524;FS=2.198;HRun=0;HaplotypeScore=189.4123;InbreedingCoeff=0.9752;MQ=68.20;MQ0=0;MQRankSum=-15.637;QD=88.90;ReadPosRankSum=5.506;VQSLOD=5.9419;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,14:20:39.13:1300,39,0	0/0:11,0:11:30.10:0,30,793	0/0:32,0:29:87.28:0,87,2104	0/0:26,0:23:66.20:0,66,1555	1/1:3,19:22:43.09:1386,43,0	1/1:2,14:16:48.14:1552,48,0	1/1:6,12:19:54.19:1699,54,0	1/1:13,16:28:81.26:2520,81,0	1/1:2,16:19:57.20:1928,57,0	0/0:34,0:34:99:0,102,2602	0/0:12,0:12:30.09:0,30,681	1/1:1,18:19:57.20:2034,57,0	1/1:2,18:20:60.21:2071,60,0	1/1:0,11:11:33.11:1150,33,0	1/1:2,25:27:78.16:2743,78,0	0/0:20,0:20:54.19:0,54,1362	1/1:4,8:12:27.75:950,28,0	1/1:4,9:13:32.60:1031,33,0	1/1:4,5:9:22.81:718,23,0	1/1:5,18:25:60.88:1968,61,0	1/1:3,6:9:18.06:572,18,0	1/1:0,15:15:45.15:1540,45,0	1/1:2,17:19:45.83:1536,46,0	1/1:1,9:11:19.29:650,19,0	1/1:2,19:22:66.23:2191,66,0	1/1:7,18:25:72.10:2254,72,0	1/1:1,23:24:72.25:2539,72,0	1/1:1,1:2:6.02:161,6,0
chr10	109050538	.	CGAAAGAAAGAAA	C	1773.18	PASS	AB=1.000;AC=27;AF=0.711;AN=38;BaseQRankSum=1.937;DP=469;FS=5.706;HRun=0;HaplotypeScore=289.8202;InbreedingCoeff=0.4966;MQ=58.79;MQ0=3;MQRankSum=-4.974;QD=7.21;ReadPosRankSum=2.960;VQSLOD=1.1827;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,8:20:2.92:17,3,0	1/1:10,0:10:1.55:4,2,0	./.	./.	./.	1/1:15,0:15:2.94:18,3,0	./.	0/0:23,0:22:0:0,0,0	./.	0/0:21,0:27:19.03:0,19,481	0/0:5,0:13:24:0,24,465	1/1:19,0:19:2.50:9,2,0	1/1:18,0:18:8.85:56,9,0	./.	1/1:23,0:23:2.96:19,3,0	0/0:13,0:19:6.84:0,7,186	1/1:13,3:16:6.02:148,6,0	1/1:8,5:13:3.01:101,3,0	1/1:12,3:14:9.03:304,9,0	1/1:16,4:21:12.04:402,12,0	0/1:10,0:10:3.64:4,0,4	./.	./.	0/0:11,0:11:1.36:0,1,3	1/1:17,0:17:5.90:38,6,0	1/1:16,8:25:14.16:522,14,0	1/1:21,2:24:9.03:254,9,0	./.
chr10	109050890	.	CAA	C	15123.51	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=14.489;DP=639;FS=0.627;HRun=3;HaplotypeScore=80.4789;InbreedingCoeff=0.9984;MQ=74.02;MQ0=0;MQRankSum=-2.077;QD=39.49;ReadPosRankSum=4.599;VQSLOD=4.5415;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:75.25:1148,75,0	0/0:12,0:12:36.12:0,36,696	0/0:32,0:31:90.12:0,90,1487	0/0:20,0:20:57.08:0,57,1011	0/0:17,0:17:45.07:0,45,763	0/0:23,0:23:69.22:0,69,1269	0/0:24,0:24:72.25:0,72,1391	1/1:0,25:25:75.19:1042,75,0	0/0:23,0:23:69.24:0,69,1333	0/0:28,0:28:78.26:0,78,1468	0/0:12,0:12:36.12:0,36,687	1/1:1,20:21:54.18:827,54,0	1/1:0,24:24:72.24:1097,72,0	1/1:0,19:19:51.17:780,51,0	1/1:0,22:22:60.20:918,60,0	0/0:39,0:39:99:0,114,2106	1/1:0,29:29:75.25:1148,75,0	1/1:1,23:24:63.21:964,63,0	1/1:0,21:21:63.06:907,63,0	1/1:0,14:14:17.93:261,18,0	1/1:2,30:32:84.28:1286,84,0	1/1:0,19:19:42.14:643,42,0	1/1:0,10:10:24.08:358,24,0	1/1:0,21:21:54.18:826,54,0	0/0:26,0:26:75.25:0,75,1366	1/1:0,22:22:63.19:921,63,0	1/1:1,38:39:99:1537,102,0	1/1:0,10:10:30.10:459,30,0
chr10	109052632	.	T	TC	23424.32	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-14.397;DP=756;FS=6.361;HRun=3;HaplotypeScore=63.8360;InbreedingCoeff=0.9983;MQ=87.55;MQ0=0;MQRankSum=-6.692;QD=37.60;ReadPosRankSum=3.368;VQSLOD=5.3922;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,54:56:99:1974,141,0	0/0:13,0:13:36.11:0,36,429	0/0:24,0:24:72.21:0,72,846	0/0:29,0:29:72.45:0,72,783	1/1:1,27:28:81.27:1133,81,0	1/1:0,22:22:66.22:923,66,0	1/1:3,25:28:72.24:1008,72,0	1/1:3,24:27:72.23:991,72,0	1/1:0,24:24:66.22:924,66,0	0/0:26,0:26:66.18:0,66,779	0/0:19,0:19:54.16:0,54,648	1/1:0,26:26:72.24:1005,72,0	1/1:4,27:31:81.27:1126,81,0	1/1:1,31:32:93.31:1302,93,0	1/1:0,30:30:84.28:1176,84,0	0/0:22,0:22:63.19:0,63,756	1/1:0,25:25:72.24:1008,72,0	1/1:2,6:8:18.06:252,18,0	1/1:2,25:27:75.21:1013,75,0	1/1:0,27:27:75.25:1050,75,0	1/1:4,44:48:99:1680,120,0	1/1:1,29:30:75.25:1050,75,0	1/1:2,29:31:81.27:1134,81,0	1/1:1,23:24:66.22:924,66,0	1/1:0,20:20:54.18:756,54,0	1/1:2,25:27:45.22:1023,45,0	1/1:0,37:37:99:1381,99,0	1/1:1,14:15:42.14:588,42,0
chr10	109053904	.	A	AGT	933.39	PASS	AB=0.849;AC=13;AF=0.250;AN=52;BaseQRankSum=-5.332;DP=528;FS=3.178;HRun=0;HaplotypeScore=101.1006;InbreedingCoeff=0.1419;MQ=64.95;MQ0=10;MQRankSum=1.412;QD=4.20;ReadPosRankSum=-0.114;VQSLOD=2.7339;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,3:21:6.01:71,6,0	0/0:9,0:9:12:0,12,119	./.	./.	0/0:12,0:18:14.20:0,14,70	0/0:23,0:27:8.52:0,9,42	0/0:23,0:29:22.73:0,23,112	0/1:34,0:30:4.49:75,0,4	0/0:5,0:8:8.52:0,9,42	0/0:12,0:12:8.69:0,9,78	0/0:12,0:12:6.01:0,6,65	0/0:4,0:10:8.52:0,9,42	0/0:5,0:9:8.36:0,8,38	0/0:9,0:17:19.89:0,20,98	0/0:9,0:21:16.82:0,17,84	0/0:9,0:10:6.01:0,6,65	0/1:20,7:28:52.79:77,0,53	0/1:7,13:20:31.73:345,0,32	0/0:15,0:16:5.68:0,6,28	0/1:15,9:27:14.24:197,0,14	0/1:36,0:35:23.37:78,0,23	0/0:7,0:14:8.52:0,9,42	0/0:8,0:18:8.50:0,9,42	0/0:14,0:18:5.68:0,6,28	0/1:18,0:23:4.75:5,0,52	1/1:8,2:11:10.28:130,10,0	0/1:16,3:19:23.21:80,0,23	1/1:3,0:3:2.99:24,3,0
chr10	109054040	.	T	TG	3112.66	PASS	AB=0.962;AC=33;AF=0.589;AN=56;BaseQRankSum=5.804;DP=528;FS=59.482;HRun=0;HaplotypeScore=101.4532;InbreedingCoeff=0.1857;MQ=59.39;MQ0=24;MQRankSum=1.686;QD=8.02;ReadPosRankSum=-0.072;VQSLOD=1.3918;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:14:6.84:116,7,0	0/0:6,0:6:14.95:0,15,122	0/0:37,0:8:13.73:0,14,112	0/0:36,0:9:13.80:0,14,62	1/1:33,0:33:76.55:382,77,0	1/1:19,0:18:30.35:186,30,0	1/1:14,0:13:25.19:140,25,0	1/1:21,0:20:12.75:186,13,0	1/1:6,0:6:11.21:51,11,0	0/0:23,0:22:61.24:0,61,518	0/0:22,0:22:62.90:0,63,628	0/1:9,0:8:55.34:55,0,101	0/1:14,0:14:28.37:144,0,28	0/1:8,0:7:30.78:31,0,64	0/1:8,11:19:18.65:19,0,100	0/0:15,0:13:38.90:0,39,327	0/1:13,0:13:5.17:83,0,5	0/1:23,0:21:72.15:138,0,72	0/1:24,0:21:54.35:158,0,54	1/1:30,0:29:43.94:338,44,0	1/1:11,0:11:9.40:86,9,0	0/1:13,0:13:21.10:45,0,21	0/1:19,1:18:46.07:156,0,46	0/1:9,0:8:10.51:11,0,73	1/1:21,0:21:48.19:265,48,0	1/1:19,0:19:23.33:281,23,0	0/1:23,0:22:7.86:153,0,8	1/1:24,0:22:38.37:282,38,0
chr10	109055844	.	A	AT	3450.27	PASS	AB=0.567;AC=19;AF=0.339;AN=56;BaseQRankSum=2.639;DP=481;FS=0.834;HRun=0;HaplotypeScore=71.0830;InbreedingCoeff=0.8385;MQ=73.09;MQ0=2;MQRankSum=-0.430;QD=17.60;ReadPosRankSum=3.685;VQSLOD=5.3428;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,34:39:53.16:602,53,0	0/0:7,0:7:21.07:0,21,291	0/0:37,0:15:26.40:0,26,282	0/0:21,0:10:3.97:0,4,114	0/0:17,0:17:48.15:0,48,641	0/0:12,0:12:33.11:0,33,453	0/0:17,0:17:46.97:0,47,632	1/1:5,17:23:50.04:495,50,0	0/0:9,0:9:27.07:0,27,347	0/0:19,0:19:57.17:0,57,742	0/0:9,0:9:27.09:0,27,375	0/0:16,0:16:34.28:0,34,182	0/0:12,0:12:4.19:0,4,106	0/0:13,0:13:28.16:0,28,177	0/0:27,0:27:41:0,41,294	0/0:12,0:12:36.12:0,36,498	1/1:2,23:25:52.32:532,52,0	1/1:2,15:17:23.25:229,23,0	1/1:8,15:23:8.28:344,8,0	0/1:4,13:17:16.97:263,0,17	1/1:1,6:8:7.82:89,8,0	0/0:15,0:15:39.68:0,40,232	0/0:13,0:13:32.31:0,32,170	0/0:12,0:12:29.41:0,29,181	0/0:17,0:17:50.90:0,51,682	1/1:4,15:19:24.20:352,24,0	1/1:3,14:17:27.80:376,28,0	1/1:1,6:7:6.27:167,6,0
chr10	109056190	.	TA	T	1860.18	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.941;DP=465;FS=2.180;HRun=10;HaplotypeScore=78.8537;InbreedingCoeff=0.9649;MQ=68.21;MQ0=0;MQRankSum=0.015;QD=19.38;ReadPosRankSum=1.640;VQSLOD=4.6102;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:32.90:0,33,256	0/0:5,0:5:12.03:0,12,133	0/0:8,0:7:14.99:0,15,149	0/0:10,0:9:10.17:0,10,73	1/1:3,28:31:62.96:547,63,0	1/1:2,18:20:53.99:469,54,0	1/1:0,9:9:26.99:234,27,0	0/0:30,1:31:71.37:0,71,502	1/1:3,16:19:28.37:394,28,0	0/0:20,0:20:39.11:0,39,431	0/0:15,1:16:10.04:0,10,338	0/0:20,1:21:24.76:0,25,334	0/0:18,0:18:50.82:0,51,390	0/0:14,0:14:35.84:0,36,270	0/0:19,0:19:46.64:0,47,344	0/0:16,0:16:39.11:0,39,431	0/0:14,0:14:29.89:0,30,230	0/0:14,0:14:29.88:0,30,227	0/0:14,0:14:38.64:0,39,268	0/0:23,0:23:62.82:0,63,497	0/0:16,0:15:38.85:0,39,297	0/0:11,0:12:29.70:0,30,218	0/0:17,0:17:38.86:0,39,295	0/0:8,0:8:17.94:0,18,138	1/1:2,15:17:44.99:391,45,0	0/0:18,0:18:47.64:0,48,348	0/0:25,0:27:62.43:0,62,471	0/0:15,0:15:44.86:0,45,344
chr10	109058938	.	C	CAT	1374.73	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=8.299;DP=554;FS=8.110;HRun=0;HaplotypeScore=155.0080;InbreedingCoeff=0.7399;MQ=59.74;MQ0=6;MQRankSum=-4.063;QD=10.26;ReadPosRankSum=1.341;VQSLOD=2.7805;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:16.12:0,16,212	0/0:14,0:14:36.04:0,36,422	0/0:26,0:13:31.77:0,32,325	0/0:22,0:15:31.91:0,32,363	1/1:14,2:16:26.96:262,27,0	1/1:8,3:12:22.11:209,22,0	1/1:15,21:37:17.98:337,18,0	0/0:33,0:27:46.99:0,47,463	1/1:3,24:26:18.06:327,18,0	0/0:41,0:40:97.39:0,97,1438	0/0:13,0:13:30.06:0,30,383	0/0:20,0:19:14.25:0,14,161	0/0:19,0:19:9.46:0,9,111	0/0:12,0:12:3.24:0,3,80	0/0:20,0:20:26.44:0,26,216	0/0:22,0:22:56.27:0,56,671	0/0:23,0:23:12.90:0,13,190	0/0:19,0:19:16.06:0,16,184	0/0:18,0:18:10.99:0,11,255	0/0:11,0:11:4.98:0,5,46	0/0:28,0:26:19.13:0,19,167	0/0:19,0:19:32.43:0,32,247	0/0:9,0:9:11.97:0,12,95	0/0:12,0:11:5.23:0,5,49	1/1:10,7:16:27.05:401,27,0	0/1:25,0:25:10.69:11,0,164	0/0:11,0:11:23.85:0,24,180	0/0:9,0:9:2.31:0,2,80
chr10	109059036	.	C	CT	20946.38	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=5.034;DP=687;FS=31.134;HRun=1;HaplotypeScore=93.6249;InbreedingCoeff=0.9905;MQ=89.44;MQ0=0;MQRankSum=-8.467;QD=38.36;ReadPosRankSum=5.538;VQSLOD=2.6336;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:41:99:1661,111,0	0/0:13,0:13:33.11:0,33,428	0/0:32,0:32:96.23:0,96,1164	0/0:25,0:25:72.14:0,72,890	1/1:2,21:23:63.20:926,63,0	1/1:0,30:30:81.27:1211,81,0	1/1:1,33:34:87.23:1276,87,0	1/1:1,25:26:75.24:1102,75,0	1/1:0,24:24:60.20:898,60,0	0/0:29,0:29:78.22:0,78,993	0/0:16,0:16:42.09:0,42,502	1/1:0,9:9:15.05:224,15,0	1/1:0,20:20:60.20:894,60,0	1/1:0,21:21:54.18:807,54,0	1/1:1,25:26:54.18:808,54,0	0/0:26,0:26:72.22:0,72,920	1/1:0,33:33:78.26:1167,78,0	1/1:0,27:27:63.21:943,63,0	1/1:0,20:21:60.14:793,60,0	1/1:0,24:24:72.17:1029,72,0	1/1:1,40:40:96.33:1438,96,0	1/1:0,21:21:60.20:897,60,0	1/1:0,24:24:60.20:897,60,0	1/1:1,24:25:66.22:988,66,0	1/1:1,20:21:54.18:810,54,0	1/1:2,34:37:69.33:1460,69,0	1/1:2,12:13:36.12:539,36,0	1/1:0,4:4:12.04:180,12,0
chr10	109061901	.	A	AAG	29767.55	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-13.026;DP=769;FS=0.358;HRun=0;HaplotypeScore=83.2336;InbreedingCoeff=0.9999;MQ=83.52;MQ0=4;MQRankSum=-5.620;QD=46.95;ReadPosRankSum=3.519;VQSLOD=6.1963;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,46:49:99:2365,129,0	0/0:14,0:14:39.13:0,39,558	0/0:28,0:28:75.08:0,75,1001	0/0:18,0:18:48.15:0,48,664	1/1:0,22:22:63.22:1136,63,0	1/1:1,15:16:36.12:660,36,0	1/1:3,26:29:69.24:1261,69,0	1/1:5,27:32:81.26:1427,81,0	1/1:1,35:36:99:1814,99,0	0/0:30,0:30:87.29:0,87,1231	0/0:21,0:21:57.19:0,57,816	1/1:0,40:40:99:2090,114,0	1/1:0,29:28:75.26:1363,75,0	1/1:0,26:28:75.26:1375,75,0	1/1:2,31:33:90.31:1650,90,0	0/0:24,0:24:69.22:0,69,971	1/1:0,27:27:75.26:1375,75,0	1/1:0,28:28:69.24:1263,69,0	1/1:4,20:24:57.19:1028,57,0	1/1:2,26:27:69.24:1247,69,0	1/1:1,30:32:78.26:1410,78,0	1/1:1,30:32:87.30:1595,87,0	1/1:2,17:20:39.10:715,39,0	1/1:2,31:32:78.27:1430,78,0	1/1:4,13:17:36.12:660,36,0	1/1:2,24:26:72.25:1320,72,0	1/1:0,25:25:72.25:1320,72,0	1/1:0,25:26:69.24:1265,69,0
chr10	109063908	.	GGTTAT	G	9530.93	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=5.589;DP=396;FS=9.829;HRun=0;HaplotypeScore=98.6205;InbreedingCoeff=0.9809;MQ=65.77;MQ0=0;MQRankSum=-9.899;QD=43.32;ReadPosRankSum=0.801;VQSLOD=4.5041;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,11:19:36.12:763,36,0	0/0:8,0:8:21.07:0,21,645	0/0:15,0:11:24.08:0,24,600	0/0:12,0:12:11.05:0,11,292	0/0:15,0:15:39.12:0,39,1084	0/0:11,0:11:21.07:0,21,631	0/0:22,0:21:54.19:0,54,1546	1/1:3,16:19:45.05:795,45,0	0/0:19,0:19:57.18:0,57,1468	0/0:20,0:20:54.14:0,54,1474	0/0:16,0:16:45.14:0,45,1271	1/1:1,10:11:23.82:509,24,0	1/1:5,8:12:30.10:634,30,0	1/1:1,13:14:27.09:572,27,0	1/1:1,9:10:24.08:509,24,0	0/0:7,0:7:21.06:0,21,489	1/1:6,12:18:39.13:818,39,0	1/1:4,6:8:18.06:382,18,0	1/1:6,7:12:30.07:558,30,0	1/1:3,11:14:30.10:635,30,0	1/1:2,8:10:18.46:336,18,0	1/1:4,5:9:21.07:418,21,0	1/1:4,2:6:12.04:254,12,0	1/1:0,13:12:15.05:318,15,0	0/0:31,0:30:84.26:0,84,2339	1/1:4,15:19:48.15:952,48,0	1/1:5,11:16:33.11:698,33,0	1/1:2,4:6:18.06:380,18,0
chr10	109063909	.	GTTAT	G	4560.56	PASS	AB=0.902;AC=29;AF=0.518;AN=56;BaseQRankSum=11.896;DP=384;FS=8.380;HRun=0;HaplotypeScore=105.8352;InbreedingCoeff=0.5705;MQ=64.98;MQ0=0;MQRankSum=-10.639;QD=21.61;ReadPosRankSum=3.733;VQSLOD=4.1254;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,2:15:36.10:412,36,0	0/0:8,0:8:24.07:0,24,619	0/0:14,0:10:27.07:0,27,662	0/0:13,0:13:12.06:0,12,411	0/0:15,0:15:42.13:0,42,1063	0/0:9,0:9:24.07:0,24,618	0/0:22,0:21:57.17:0,57,1535	1/1:18,1:19:0.43:303,0,0	0/0:19,0:19:57.20:0,57,1514	0/0:20,0:20:57.19:0,57,1560	0/0:15,0:15:45.15:0,45,1238	1/1:11,0:11:6.13:231,6,0	1/1:11,1:11:30.07:313,30,0	1/1:13,0:13:27.06:283,27,0	1/1:10,0:10:4.60:242,5,0	0/0:7,0:7:21.07:0,21,550	1/1:18,0:18:23.33:444,23,0	1/1:10,0:8:1.33:169,1,0	1/1:11,1:11:13.21:255,13,0	0/1:13,0:13:4.28:330,0,4	1/1:9,0:9:4.14:183,4,0	0/1:6,3:9:3.67:195,0,4	0/1:5,1:6:30.33:126,0,30	1/1:13,0:12:15.04:172,15,0	0/0:31,0:30:87.24:0,87,2306	0/1:17,2:19:5.50:417,0,5	0/1:16,0:16:50.84:299,0,51	1/1:6,0:6:18.04:187,18,0
chr10	109063914	.	GT	G	241.26	PASS	AB=0.965;AC=25;AF=0.446;AN=56;BaseQRankSum=11.563;DP=394;FS=3.069;HRun=2;HaplotypeScore=111.1394;InbreedingCoeff=0.3391;MQ=61.22;MQ0=0;MQRankSum=-9.204;QD=1.11;ReadPosRankSum=3.076;VQSLOD=-0.6320;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,2:19:22.91:23,0,71	0/0:8,0:8:21.07:0,21,315	0/0:16,0:11:14.74:0,15,282	0/0:14,0:13:5.13:0,5,176	0/0:15,0:15:36.12:0,36,539	0/0:11,0:11:24.05:0,24,335	0/0:24,0:21:57.09:0,57,775	0/1:18,1:19:17.69:20,0,18	0/0:18,0:18:52.89:0,53,697	0/0:18,0:18:51.15:0,51,727	0/0:15,0:15:42.14:0,42,624	1/1:10,0:10:12.36:31,12,0	1/1:11,1:11:15.81:40,16,0	1/1:14,0:14:13.99:34,14,0	1/1:11,0:11:12.44:30,12,0	0/0:6,0:6:18.01:0,18,224	0/1:19,0:19:20.86:22,0,21	0/1:12,0:10:7.04:14,0,7	0/1:12,1:12:4.46:21,0,4	0/1:13,0:13:19.07:19,0,19	0/1:9,0:9:7.09:7,0,11	1/1:5,3:8:11.93:43,12,0	1/1:4,1:5:8.07:31,8,0	1/1:14,0:13:7.77:19,8,0	0/0:31,0:30:81.25:0,81,1184	0/1:17,2:19:21.82:36,0,22	0/1:15,0:15:20.78:21,0,35	1/1:6,0:6:9.50:25,10,0
chr10	109063941	.	CTTTTCTTTTTTT	C	3740.45	PASS	AB=0.995;AC=25;AF=0.446;AN=56;BaseQRankSum=3.528;DP=464;FS=0.927;HRun=0;HaplotypeScore=165.3822;InbreedingCoeff=0.3698;MQ=41.94;MQ0=27;MQRankSum=-3.063;QD=13.22;ReadPosRankSum=-1.312;VQSLOD=2.3638;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,2:23:30.89:462,31,0	0/0:11,0:11:14.92:0,15,282	0/0:16,0:5:2.20:0,2,118	0/1:22,0:8:2.97:3,0,27	0/0:24,0:23:5.16:0,5,755	0/0:13,0:11:20.43:0,20,731	0/0:19,0:16:39.02:0,39,1140	1/1:16,0:16:5.54:156,6,0	0/0:15,0:15:38.95:0,39,887	0/0:22,0:22:55.19:0,55,1056	0/0:14,0:13:30.08:0,30,973	0/1:12,0:12:35.65:36,0,270	0/1:17,0:14:24.26:24,0,411	0/1:17,0:14:24.85:25,0,197	0/1:14,0:14:25.92:26,0,225	0/0:11,0:10:23.96:0,24,321	1/1:20,3:22:56.53:855,57,0	1/1:16,2:17:32.31:542,32,0	1/1:14,6:18:19.02:390,19,0	1/1:12,1:11:27.26:275,27,0	0/1:6,0:6:3.67:48,0,4	0/0:11,0:9:6.12:0,6,445	0/1:16,0:15:21.59:22,0,487	0/1:16,0:14:19.74:20,0,126	0/0:25,0:22:48.13:0,48,1674	1/1:20,0:18:47.41:382,47,0	1/1:21,1:20:44.52:474,45,0	0/1:3,0:3:0:0,0,0
chr10	109063945	.	TC	T	2409.59	PASS	AB=1.000;AC=34;AF=0.630;AN=54;BaseQRankSum=4.151;DP=454;FS=14.313;HRun=1;HaplotypeScore=88.1616;InbreedingCoeff=0.6908;MQ=38.38;MQ0=35;MQRankSum=-4.422;QD=7.75;ReadPosRankSum=-0.805;VQSLOD=-0.5487;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:18:17.32:182,17,0	0/0:9,0:9:13.72:0,14,97	0/1:15,0:4:2.13:2,0,27	0/1:21,0:6:6.67:8,0,7	0/0:22,0:21:36.45:0,36,242	0/0:15,0:11:15.33:0,15,141	0/0:18,0:14:38.04:0,38,273	0/1:15,0:14:12.70:91,0,13	0/0:17,0:15:35.84:0,36,242	0/0:19,2:21:8.41:0,8,264	0/0:15,0:14:28.41:0,28,192	1/1:12,0:12:17.69:147,18,0	1/1:18,1:16:37.55:236,38,0	1/1:16,0:12:8.05:66,8,0	1/1:13,0:11:10.43:82,10,0	0/1:13,0:11:8.51:9,0,86	1/1:26,0:23:38.57:307,39,0	1/1:19,0:18:9.85:140,10,0	1/1:15,0:12:10.72:110,11,0	1/1:15,0:11:28.98:183,29,0	1/1:4,0:4:11.77:75,12,0	1/1:13,0:10:21.03:148,21,0	1/1:17,1:16:13.23:127,13,0	1/1:15,0:13:14.67:99,15,0	0/0:25,0:22:47.67:0,48,379	1/1:20,0:18:46.47:318,46,0	1/1:20,0:18:39.30:280,39,0	./.
chr10	109063969	.	T	TC	629.30	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=0.900;DP=411;FS=5.552;HRun=1;HaplotypeScore=65.9005;InbreedingCoeff=0.8643;MQ=33.64;MQ0=81;MQRankSum=-2.949;QD=6.69;ReadPosRankSum=2.464;VQSLOD=0.9561;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:13:29.61:0,30,200	0/0:6,0:6:8.74:0,9,65	1/1:10,0:1:0.47:1,0,0	./.	1/1:15,3:17:27.16:186,27,0	1/1:18,2:12:23.78:185,24,0	1/1:15,2:10:20.73:135,21,0	0/0:13,0:12:32.65:0,33,219	1/1:10,1:10:20.60:154,21,0	0/0:13,0:13:35.84:0,36,279	0/0:16,0:13:14.93:0,15,117	0/0:10,0:9:17.93:0,18,144	0/0:14,0:12:25.06:0,25,167	0/0:15,0:10:12:0,12,105	0/0:14,0:10:14.94:0,15,119	0/0:9,0:8:13.80:0,14,109	0/0:27,0:22:47.24:0,47,314	0/0:16,0:12:25.28:0,25,168	0/0:19,0:12:29.60:0,30,196	0/0:15,0:11:29.78:0,30,226	0/0:8,0:7:14.88:0,15,113	0/0:16,0:8:14.94:0,15,123	0/0:14,0:11:11.93:0,12,91	0/0:15,0:12:8.26:0,8,43	1/1:13,2:12:20.79:137,21,0	0/0:11,0:8:17.81:0,18,127	0/0:20,0:16:38.42:0,38,283	0/0:12,0:5:2.98:0,3,21
chr10	109064044	.	CG	C	7367.84	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-4.199;DP=491;FS=2.459;HRun=8;HaplotypeScore=62.3837;InbreedingCoeff=0.9862;MQ=66.33;MQ0=11;MQRankSum=-3.916;QD=23.02;ReadPosRankSum=3.946;VQSLOD=5.4480;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:23:63.09:603,63,0	0/0:11,0:11:29.88:0,30,324	0/0:16,0:11:23.28:0,23,311	0/0:20,0:10:20.33:0,20,167	0/0:6,0:17:28.86:0,29,155	0/0:7,0:14:14.58:0,15,91	0/0:5,0:24:51.87:0,52,274	1/1:3,16:18:44.46:376,44,0	0/0:3,0:17:31.64:0,32,163	0/0:17,0:17:42.09:0,42,483	0/0:12,0:12:27.04:0,27,300	1/1:2,10:12:33.01:309,33,0	1/1:1,16:17:42.07:405,42,0	1/1:1,13:14:30.04:289,30,0	1/1:4,14:18:42.06:405,42,0	0/0:7,0:7:18.06:0,18,217	1/1:2,28:29:75.10:717,75,0	1/1:1,16:16:48.08:462,48,0	1/1:3,16:19:45.03:416,45,0	1/1:2,13:15:36.05:347,36,0	1/1:1,19:20:54.04:511,54,0	1/1:1,13:14:33.05:318,33,0	1/1:1,17:17:45.07:434,45,0	1/1:0,27:27:54.09:521,54,0	0/0:4,0:14:25.84:0,26,131	1/1:5,26:31:83.81:791,84,0	1/1:3,13:14:39.06:376,39,0	1/1:2,7:8:9.01:87,9,0
chr10	109067243	.	AGG	A	4374.30	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-4.563;DP=579;FS=3.779;HRun=2;HaplotypeScore=90.1197;InbreedingCoeff=0.9879;MQ=66.31;MQ0=12;MQRankSum=-0.854;QD=21.03;ReadPosRankSum=-1.715;VQSLOD=2.3630;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:27:74.20:607,74,0	0/0:12,0:12:32.96:0,33,278	0/0:20,0:12:9.77:0,10,134	0/0:28,0:19:24.89:0,25,259	0/0:28,0:26:43.46:0,43,380	0/0:18,0:17:29.26:0,29,263	0/0:25,0:23:64.41:0,64,514	1/1:35,0:34:92.46:830,92,0	0/0:20,0:20:34.86:0,35,292	0/0:16,0:14:38.72:0,39,331	0/0:18,0:18:35.89:0,36,290	0/0:26,0:26:65.93:0,66,555	0/0:14,0:13:32.12:0,32,216	0/0:11,0:11:26.86:0,27,220	0/0:21,0:21:52.30:0,52,429	0/0:20,0:20:54:0,54,419	1/1:15,2:17:46.41:416,46,0	1/1:16,0:15:38.89:323,39,0	1/1:16,0:15:44.88:380,45,0	1/1:1,14:15:29.72:204,30,0	1/1:34,0:32:24.31:575,24,0	0/0:22,0:21:51.14:0,51,408	0/0:26,0:25:56.88:0,57,466	0/0:23,0:22:56.88:0,57,432	0/0:23,0:22:52.66:0,53,471	1/1:12,0:11:13.03:246,13,0	1/1:19,0:19:53.68:427,54,0	1/1:15,0:15:44.84:366,45,0
chr10	109067775	.	CTCCCTGGCACGTGCAATGTT	C	10939.93	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.362;DP=760;FS=5.087;HRun=0;HaplotypeScore=375.1943;InbreedingCoeff=0.9996;MQ=73.20;MQ0=0;MQRankSum=-13.602;QD=91.17;ReadPosRankSum=3.040;VQSLOD=3.4487;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,7963	0/0:13,0:13:36.12:0,36,2896	0/0:35,0:35:77.90:0,78,4146	0/0:15,0:14:36.09:0,36,1754	1/1:1,23:24:39.13:1839,39,0	1/1:0,24:24:51.18:2742,51,0	1/1:1,22:23:33.11:1754,33,0	0/0:36,0:36:93.30:0,93,6856	1/1:0,23:23:54.19:2819,54,0	0/0:29,0:29:78.25:0,78,6482	0/0:21,0:21:63.09:0,63,4548	0/0:38,0:38:99:0,111,8595	0/0:32,0:32:90.29:0,90,7674	0/0:41,0:41:99:0,114,9818	0/0:34,0:34:93.31:0,93,7938	0/0:27,0:27:75.20:0,75,6451	0/0:32,0:32:90.28:0,90,6916	0/0:22,0:22:63.17:0,63,4732	0/0:23,0:23:51.15:0,51,3299	0/0:21,0:21:60.19:0,60,5055	0/0:37,0:37:96.32:0,96,8370	0/0:30,0:30:84.27:0,84,7241	0/0:19,0:19:42.14:0,42,3433	0/0:34,0:34:96.28:0,96,8397	1/1:4,22:26:33.11:1786,33,0	0/0:24,0:24:69.23:0,69,5977	0/0:31,0:31:90.27:0,90,6995	0/0:9,0:9:27.09:0,27,2577
chr10	109068305	.	GCA	G	5037.25	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-6.195;DP=817;FS=2.126;HRun=0;HaplotypeScore=167.8221;InbreedingCoeff=0.9999;MQ=80.01;MQ0=1;MQRankSum=-1.953;QD=40.62;ReadPosRankSum=0.818;VQSLOD=5.4843;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:99:0,138,2570	0/0:12,0:12:36.12:0,36,674	0/0:22,0:21:46.41:0,46,852	0/0:18,0:18:33.41:0,33,515	1/1:0,29:29:78.73:1149,79,0	1/1:0,26:26:72.24:1060,72,0	1/1:0,20:20:57.19:840,57,0	0/0:33,0:33:93.32:0,93,1740	1/1:1,31:32:87.29:1281,87,0	0/0:25,0:25:72.24:0,72,1319	0/0:18,0:18:51.17:0,51,955	0/0:29,0:29:84.29:0,84,1573	0/0:44,0:44:99:0,126,2359	0/0:48,0:48:99:0,138,2584	0/0:45,0:45:99:0,123,2254	0/0:35,0:35:99:0,102,1901	0/0:39,0:39:99:0,114,2110	0/0:23,0:23:63.22:0,63,1157	0/0:23,0:23:69.22:0,69,1240	0/0:20,0:20:57.20:0,57,1067	0/0:58,0:58:99:0,163,3002	0/0:28,0:28:84.27:0,84,1537	0/0:28,0:28:78.27:0,78,1447	0/0:24,0:24:66.23:0,66,1236	1/1:0,17:17:48.16:707,48,0	0/0:34,0:34:99:0,99,1825	0/0:24,0:24:63.22:0,63,1178	0/0:14,0:14:36.09:0,36,639
chr10	109068327	.	CTG	C	23353.45	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-1.745;DP=867;FS=3.936;HRun=0;HaplotypeScore=126.6628;InbreedingCoeff=0.9999;MQ=84.06;MQ0=1;MQRankSum=-3.940;QD=39.58;ReadPosRankSum=4.381;VQSLOD=6.7944;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,56:58:99:2341,160,0	0/0:10,0:10:30.10:0,30,559	0/0:38,0:37:99:0,99,1798	0/0:14,0:14:36.12:0,36,629	0/0:29,0:29:83.96:0,84,1540	0/0:27,0:27:75.24:0,75,1371	0/0:24,0:24:63.22:0,63,1180	1/1:4,24:28:72.20:1016,72,0	0/0:30,0:30:84.27:0,84,1528	0/0:27,0:27:78.27:0,78,1452	0/0:18,0:18:48.15:0,48,867	1/1:1,34:35:99:1458,99,0	1/1:4,44:48:99:1811,123,0	1/1:2,45:47:99:1900,129,0	1/1:1,47:48:99:1899,129,0	0/0:36,0:36:99:0,108,1923	1/1:2,42:44:99:1761,120,0	1/1:2,16:18:45.15:663,45,0	1/1:2,25:27:75.24:1080,75,0	1/1:1,19:20:51.17:751,51,0	1/1:1,58:59:99:2341,160,0	1/1:0,26:26:69.23:1015,69,0	1/1:0,31:31:90.30:1324,90,0	1/1:0,25:25:72.24:1060,72,0	0/0:24,0:24:69.24:0,69,1282	1/1:2,32:34:96.30:1387,96,0	1/1:1,24:25:63.21:927,63,0	1/1:0,16:16:42.14:618,42,0
chr10	109069101	.	GGTAGCAAGTCTACCAGAGGACAAGAACTTCATCCTGAAGT	G	4295.29	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.033;DP=643;FS=3.489;HRun=0;HaplotypeScore=598.4997;InbreedingCoeff=0.8875;MQ=79.83;MQ0=0;MQRankSum=-6.118;QD=55.07;ReadPosRankSum=1.084;VQSLOD=0.5302;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,14318	0/0:4,0:4:12.04:0,12,1880	0/0:21,0:20:54.02:0,54,3423	0/0:22,0:22:60.21:0,60,4125	1/1:10,4:14:15.05:1243,15,0	1/1:8,7:15:9.03:880,9,0	1/1:15,0:14:3.01:44,3,0	0/0:39,0:39:99:0,108,8806	1/1:14,8:22:15.05:1541,15,0	0/0:28,0:28:81.28:0,81,11785	0/0:11,0:11:30.10:0,30,3788	0/0:33,0:33:96.33:0,96,14018	0/0:24,0:24:69.24:0,69,9979	0/0:23,0:23:66.23:0,66,9551	0/0:30,0:30:87.30:0,87,11262	0/0:29,0:29:81.28:0,81,10817	0/0:24,0:24:69.24:0,69,9198	0/0:25,0:25:75.26:0,75,9942	0/0:16,0:16:48.14:0,48,5159	0/0:18,0:18:54.17:0,54,7254	0/0:44,0:44:99:0,129,18079	0/0:31,0:31:90.31:0,90,11817	0/0:17,0:17:51.16:0,51,7221	0/0:29,0:29:78.27:0,78,11163	1/1:10,2:12:5.80:587,6,0	0/0:29,0:29:81.28:0,81,11712	0/0:26,0:26:75.26:0,75,10282	0/0:3,0:3:9.03:0,9,1051
chr10	109069178	.	CCACACACACACACA	C	2718.27	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=7.378;DP=523;FS=5.550;HRun=0;HaplotypeScore=209.2604;InbreedingCoeff=0.8378;MQ=71.94;MQ0=11;MQRankSum=-5.504;QD=23.84;ReadPosRankSum=1.507;VQSLOD=1.8461;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:42.14:0,42,2132	0/0:9,0:11:15.52:0,16,920	./.	0/0:20,0:14:6.02:0,6,74	0/0:13,0:13:6.02:0,6,216	0/0:14,0:17:24.07:0,24,882	0/0:16,0:18:24.61:0,25,1040	0/0:18,0:17:12.04:0,12,362	0/0:16,0:20:30.10:0,30,1190	0/0:23,0:23:30.10:0,30,901	0/0:10,0:11:9.03:0,9,544	1/1:11,6:20:29.01:962,29,0	1/1:7,9:16:15.05:586,15,0	1/1:10,7:17:15.05:547,15,0	1/1:8,3:12:15.05:442,15,0	0/0:13,0:18:33.11:0,33,1635	0/0:14,0:20:22.87:0,23,1077	0/0:13,0:15:24.08:0,24,1260	0/0:22,0:21:21.06:0,21,699	0/0:11,0:14:18.06:0,18,851	0/0:59,0:60:78.21:0,78,3764	1/1:17,0:15:5.23:116,5,0	1/1:7,5:12:5.27:221,5,0	1/1:15,4:19:2.97:20,3,0	0/0:9,0:9:15.05:0,15,809	0/0:23,0:22:37.01:0,37,1626	0/0:7,0:8:12.04:0,12,418	0/0:5,0:5:12.04:0,12,487
chr10	109071260	.	A	ACTGCTGAGCCAT	70676.93	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-8.052;DP=676;FS=0.389;HRun=0;HaplotypeScore=183.2079;InbreedingCoeff=0.9978;MQ=71.25;MQ0=0;MQRankSum=-16.130;QD=129.44;ReadPosRankSum=0.651;VQSLOD=5.2151;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,14:35:63.22:3340,63,0	0/0:19,0:19:54.19:0,54,1924	0/0:23,0:23:52.97:0,53,1774	0/0:16,0:17:38.31:0,38,1430	1/1:12,13:28:54.19:2916,54,0	1/1:8,14:27:54.19:2871,54,0	1/1:8,10:24:51.17:2549,51,0	1/1:27,11:42:99:5849,117,0	1/1:10,16:26:75.26:4327,75,0	0/0:34,0:34:96.32:0,96,3445	0/0:17,0:17:48.16:0,48,1765	1/1:7,16:24:66.23:3761,66,0	1/1:9,14:23:66.23:3708,66,0	1/1:7,15:25:60.21:3216,60,0	1/1:7,14:23:51.18:2840,51,0	0/0:20,0:20:60.21:0,60,2281	1/1:8,9:22:39.13:2302,39,0	1/1:9,4:18:24.08:1227,24,0	1/1:5,8:16:42.12:2273,42,0	1/1:5,17:22:60.21:3525,60,0	1/1:4,3:14:18.06:645,18,0	1/1:13,14:33:69.24:3670,69,0	1/1:8,19:26:66.22:3565,66,0	1/1:4,10:14:39.13:2171,39,0	1/1:3,16:20:57.20:3341,57,0	1/1:14,24:41:99:6454,117,0	1/1:8,20:29:78.27:4380,78,0	1/1:4,8:12:30.10:1748,30,0
chr10	109073576	.	C	CTTTCAGGTGTATATTTATAGAGTATTA	1859.63	PASS	AB=0.750;AC=28;AF=0.933;AN=30;BaseQRankSum=-3.542;DP=38;FS=15.862;HRun=0;HaplotypeScore=41.5784;InbreedingCoeff=-0.2493;MQ=158.02;MQ0=0;MQRankSum=-2.727;QD=50.26;ReadPosRankSum=-1.911;VQSLOD=-0.1043;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:5:3.01:49,3,0	./.	0/1:6,0:8:95.43:95,0,124	0/1:4,1:7:12.46:967,0,12	1/1:0,0:1:3.01:120,3,0	1/1:1,0:1:3.01:58,3,0	./.	./.	./.	./.	1/1:1,0:1:3.01:61,3,0	1/1:3,0:3:3.01:60,3,0	./.	1/1:1,0:1:3.01:40,3,0	./.	1/1:2,0:2:5.99:50,6,0	./.	1/1:0,0:1:3.01:39,3,0	1/1:0,0:1:3.01:136,3,0	1/1:1,0:1:3:25,3,0	./.	./.	1/1:1,0:1:3.01:41,3,0	./.	1/1:1,0:2:6.02:182,6,0	./.	1/1:1,0:1:3:25,3,0	./.
chr10	109074557	.	C	CGTGTGTGTGTGTGTGT	8819.23	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=1.870;DP=705;FS=6.086;HRun=0;HaplotypeScore=296.1452;InbreedingCoeff=0.6115;MQ=63.61;MQ0=9;MQRankSum=-4.324;QD=16.52;ReadPosRankSum=-1.139;VQSLOD=2.5448;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:39:18.56:458,19,0	0/0:10,0:13:27.07:0,27,1001	0/0:45,0:27:3.80:0,4,129	0/0:34,0:19:3.01:0,3,37	1/1:28,0:26:12:221,12,0	1/1:22,0:22:12.47:298,12,0	0/1:23,0:21:7.96:209,0,8	1/1:39,0:33:39.06:982,39,0	1/1:23,0:20:9.03:300,9,0	0/0:34,0:35:48.10:0,48,1534	0/0:21,0:23:36.09:0,36,1045	1/1:23,0:22:17.76:521,18,0	1/1:20,0:20:15.52:722,16,0	1/1:28,0:28:14.72:398,15,0	0/0:21,0:21:0.47:0,0,1	0/1:26,0:28:1.43:1,0,2062	1/1:8,2:16:9.03:389,9,0	1/1:23,0:20:18.06:778,18,0	1/1:20,0:18:18.02:664,18,0	1/1:31,0:28:13.49:416,13,0	1/1:22,0:31:3.45:22,3,0	1/1:14,0:14:9.03:169,9,0	1/1:16,0:16:9.01:208,9,0	1/1:25,0:24:11.35:117,11,0	1/1:18,0:17:2.78:90,3,0	1/1:24,0:24:21.07:1069,21,0	1/1:13,5:25:8.62:461,9,0	1/1:9,1:13:6.02:325,6,0
chr10	109075532	.	AATTATT	A	2255.49	PASS	AC=16;AF=0.421;AN=38;BaseQRankSum=-0.870;DP=275;FS=3.375;HRun=0;HaplotypeScore=61.7170;InbreedingCoeff=0.6977;MQ=67.96;MQ0=3;MQRankSum=0.912;QD=16.23;ReadPosRankSum=1.268;VQSLOD=2.0326;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,1:17:1.76:344,2,0	0/0:3,0:3:3.01:0,3,44	./.	./.	./.	0/0:8,0:8:14.78:0,15,192	./.	1/1:38,6:41:17.90:217,18,0	./.	0/0:9,0:9:6.02:0,6,169	0/0:9,0:9:9.02:0,9,214	0/0:8,0:8:6.02:0,6,181	0/0:7,0:7:3.01:0,3,82	0/0:7,0:7:5.75:0,6,107	0/0:7,0:7:6.02:0,6,181	0/0:6,0:6:12.04:0,12,361	1/1:22,0:22:27.09:533,27,0	1/1:16,0:15:16.59:359,17,0	1/1:8,4:12:12.04:240,12,0	./.	1/1:6,0:6:3.01:61,3,0	./.	./.	0/0:5,0:5:6.02:0,6,178	0/0:10,0:10:18.06:0,18,375	./.	1/1:7,1:8:12.04:242,12,0	1/1:14,0:14:12.47:411,12,0
chr10	109075689	.	C	CT	2041.30	PASS	AB=0.867;AC=21;AF=0.375;AN=56;BaseQRankSum=0.556;DP=313;FS=7.445;HRun=9;HaplotypeScore=52.9636;InbreedingCoeff=0.7045;MQ=66.50;MQ0=19;MQRankSum=-2.559;QD=11.03;ReadPosRankSum=0.043;VQSLOD=1.9240;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,13:20:30.04:316,30,0	0/0:2,0:2:6:0,6,52	0/1:32,0:9:13.01:13,0,88	0/1:27,0:10:1.44:1,0,16	0/0:5,0:5:11.99:0,12,104	0/0:10,0:10:2.76:0,3,184	0/0:9,0:9:23.98:0,24,208	1/1:9,8:15:24.03:252,24,0	0/0:6,0:6:18:0,18,156	0/0:9,0:9:20.97:0,21,179	0/0:7,0:7:11.99:0,12,104	0/0:8,0:8:17.98:0,18,156	0/0:7,0:7:8.97:0,9,78	0/0:6,0:6:18:0,18,156	0/0:10,0:8:17.91:0,18,155	0/0:9,0:9:17.99:0,18,156	1/1:3,9:12:25.93:252,26,0	1/1:3,10:12:21.06:232,21,0	0/1:4,8:11:12.64:205,0,13	1/1:0,6:7:20.89:213,21,0	1/1:0,9:9:15.04:164,15,0	0/0:9,0:7:11.96:0,12,104	0/0:7,0:5:8.68:0,9,77	0/0:11,0:10:20.95:0,21,175	0/0:13,0:13:32.98:0,33,286	1/1:6,2:8:8.99:87,9,0	1/1:4,9:13:6.16:275,6,0	1/1:2,11:13:21.06:232,21,0
chr10	109077033	.	TG	T	3937.52	PASS	AB=1.000;AC=43;AF=0.796;AN=54;BaseQRankSum=2.975;DP=211;FS=1.945;HRun=8;HaplotypeScore=24.7222;InbreedingCoeff=0.6207;MQ=79.78;MQ0=0;MQRankSum=-1.115;QD=21.06;ReadPosRankSum=2.424;VQSLOD=2.7552;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,9:11:15.02:145,15,0	0/0:2,0:2:3.01:0,3,36	0/0:5,0:6:0.07:0,0,61	0/1:7,0:6:13.31:13,0,63	1/1:2,1:3:3:29,3,0	1/1:0,6:6:18.03:173,18,0	1/1:0,12:12:30.02:290,30,0	1/1:0,2:2:6.01:58,6,0	1/1:1,12:13:30.04:288,30,0	0/0:5,0:5:15.05:0,15,181	0/0:3,0:3:9.03:0,9,108	1/1:1,12:13:30.05:289,30,0	1/1:3,8:11:24.04:232,24,0	1/1:0,7:7:17.66:173,18,0	1/1:1,5:6:12.02:116,12,0	0/0:8,0:8:21.06:0,21,252	1/1:1,8:9:21.03:203,21,0	1/1:0,3:3:9.01:87,9,0	1/1:2,0:2:3:29,3,0	1/1:1,3:4:9.01:86,9,0	1/1:6,33:39:56.91:832,57,0	1/1:1,4:5:9.01:87,9,0	1/1:1,4:5:12.02:116,12,0	1/1:0,11:11:30.05:290,30,0	1/1:2,5:7:15.02:144,15,0	1/1:0,4:4:12.02:115,12,0	1/1:1,5:6:15.02:144,15,0	./.
chr10	109077571	.	TCTTTATAGATTTTCTCGACAAGCAGTAGA	T	14004.93	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=11.998;DP=629;FS=10.418;HRun=0;HaplotypeScore=447.9524;InbreedingCoeff=0.9746;MQ=87.46;MQ0=0;MQRankSum=-10.967;QD=79.57;ReadPosRankSum=3.378;VQSLOD=2.0893;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,17:30:39.13:2714,39,0	0/0:15,0:15:45.13:0,45,5131	0/0:27,0:27:75.24:0,75,5242	0/0:22,0:22:54.60:0,55,3512	0/0:21,0:21:60.21:0,60,7148	0/0:27,0:27:78.27:0,78,9008	0/0:31,0:31:87.29:0,87,8875	1/1:19,0:19:9.02:181,9,0	0/0:27,0:27:75.26:0,75,8759	0/0:31,0:31:93.31:0,93,11427	0/0:17,0:17:51.18:0,51,5638	0/0:26,0:26:75.26:0,75,7760	0/0:27,0:27:78.27:0,78,8325	0/0:24,0:24:72.25:0,72,8811	0/0:26,0:26:78.27:0,78,8353	0/0:22,0:22:66.23:0,66,7413	1/1:12,10:22:18.06:1389,18,0	1/1:2,7:9:15.05:1158,15,0	1/1:10,5:15:15.01:742,15,0	1/1:4,13:17:36.12:2729,36,0	1/1:9,8:17:9.03:343,9,0	0/0:28,0:28:81.27:0,81,7397	0/0:13,0:13:36.11:0,36,3785	0/0:34,0:34:96.33:0,96,11746	0/0:35,0:35:99:0,102,12996	1/1:12,10:22:27.09:1739,27,0	1/1:10,7:17:18.06:1389,18,0	1/1:1,7:8:21.07:1621,21,0
chr10	109081023	.	T	TGCTA	7164.90	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-12.497;DP=844;FS=6.575;HRun=0;HaplotypeScore=164.9746;InbreedingCoeff=0.9997;MQ=88.30;MQ0=1;MQRankSum=-5.557;QD=54.28;ReadPosRankSum=0.487;VQSLOD=5.8147;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,126,2350	0/0:9,0:9:27.09:0,27,503	0/0:26,0:26:72.25:0,72,1285	0/0:36,0:36:99:0,105,1854	1/1:6,16:21:42.14:1119,42,0	1/1:3,23:26:63.22:1679,63,0	1/1:3,24:28:63.22:1673,63,0	0/0:47,0:47:99:0,123,2252	1/1:5,26:32:66.23:1749,66,0	0/0:45,0:45:99:0,123,2265	0/0:25,0:25:75.24:0,75,1338	0/0:47,0:47:99:0,138,2559	0/0:28,0:28:72.25:0,72,1343	0/0:33,0:33:93.30:0,93,1659	0/0:28,0:28:72.25:0,72,1343	0/0:36,0:36:99:0,102,1902	0/0:28,0:28:81.28:0,81,1509	0/0:19,0:19:54.19:0,54,1008	0/0:17,0:17:48.16:0,48,837	0/0:33,0:33:93.32:0,93,1735	0/0:36,0:36:99:0,99,1813	0/0:30,0:30:90.31:0,90,1680	0/0:24,0:24:63.19:0,63,1132	0/0:34,0:34:59.91:0,60,1778	1/1:5,16:24:36.12:945,36,0	0/0:36,0:36:99:0,99,1780	0/0:28,0:28:84.29:0,84,1566	0/0:20,0:20:60.21:0,60,1096
chr10	109084389	.	A	AGAGAGAGG	4248.31	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=1.836;DP=1048;FS=4.120;HRun=0;HaplotypeScore=260.8541;InbreedingCoeff=0.9559;MQ=67.61;MQ0=1;MQRankSum=-5.088;QD=23.09;ReadPosRankSum=-3.851;VQSLOD=3.2957;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,114,2559	0/0:18,0:18:24.06:0,24,529	0/0:29,0:21:5.75:0,6,65	0/0:40,0:33:12.02:0,12,165	1/1:23,8:31:15.05:268,15,0	1/1:25,5:30:36.11:953,36,0	1/1:29,16:47:13.87:443,14,0	0/0:34,0:34:38.59:0,39,701	1/1:28,7:36:72.21:2102,72,0	0/0:40,0:40:60.20:0,60,1351	0/0:19,0:19:33.11:0,33,754	0/0:41,0:41:69.24:0,69,1618	0/0:53,0:53:99:0,99,2386	0/0:42,0:42:81.25:0,81,1789	0/0:54,0:54:99:0,117,2659	0/0:42,0:42:84.27:0,84,1938	0/0:31,0:31:54.19:0,54,1286	0/0:34,0:33:72.25:0,72,1689	0/0:24,0:24:34.36:0,34,766	0/0:24,0:24:33.07:0,33,655	0/0:95,0:95:99:0,184,3982	0/0:37,0:37:72.23:0,72,1622	0/0:20,0:20:39.08:0,39,848	0/0:53,0:53:46.35:0,46,2511	1/1:18,18:40:17.18:483,17,0	0/0:40,0:40:75.24:0,75,1610	0/0:30,0:29:48.16:0,48,1141	0/0:12,0:12:24.06:0,24,506
chr10	109084514	.	AGT	A	14424.36	PASS	AB=0.581;AC=29;AF=0.518;AN=56;BaseQRankSum=16.162;DP=957;FS=2.933;HRun=0;HaplotypeScore=121.8619;InbreedingCoeff=0.9282;MQ=72.02;MQ0=3;MQRankSum=-3.046;QD=27.74;ReadPosRankSum=3.200;VQSLOD=6.4821;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,36:45:99:1312,105,0	0/0:12,0:12:36.12:0,36,593	0/0:29,1:28:28.68:0,29,1002	0/0:54,1:53:73.74:0,74,1632	1/1:2,19:21:51.12:620,51,0	1/1:1,20:20:48.15:600,48,0	1/1:12,33:45:99:1203,99,0	1/1:11,18:29:54.11:634,54,0	1/1:9,23:33:69.10:843,69,0	0/0:31,0:31:81.26:0,81,1290	0/0:12,0:12:30.10:0,30,494	0/0:38,0:38:99:0,111,1821	0/0:38,0:38:90.31:0,90,1485	0/0:35,0:35:78.27:0,78,1288	0/0:57,0:56:99:0,148,2422	0/0:42,0:42:99:0,114,1882	1/1:4,33:37:87.28:1088,87,0	1/1:6,26:32:69.18:846,69,0	1/1:12,12:24:36.11:450,36,0	1/1:1,23:24:69.18:846,69,0	1/1:14,72:87:99:2411,195,0	0/0:19,0:19:51.17:0,51,840	0/0:15,0:15:33.11:0,33,540	0/0:52,0:52:99:0,126,2077	1/1:4,29:33:81.26:1013,81,0	0/1:10,26:36:58.32:923,0,58	1/1:2,25:27:66.17:808,66,0	1/1:3,22:25:66.21:826,66,0
chr10	109087940	.	T	TCCCTG	5667.50	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-9.916;DP=705;FS=3.037;HRun=0;HaplotypeScore=127.2086;InbreedingCoeff=0.9982;MQ=77.76;MQ0=0;MQRankSum=-1.730;QD=45.34;ReadPosRankSum=4.089;VQSLOD=5.2737;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,102,1958	0/0:9,0:9:21.07:0,21,364	0/0:18,0:19:48.06:0,48,790	0/0:16,0:16:24.08:0,24,391	1/1:4,18:24:39.06:1094,39,0	1/1:2,15:17:27.09:796,27,0	1/1:11,18:31:39.13:1103,39,0	0/0:23,0:23:42.61:0,43,729	1/1:3,19:22:39.13:1151,39,0	0/0:31,0:31:69.19:0,69,1296	0/0:20,0:20:45.14:0,45,818	0/0:38,0:38:99:0,105,1932	0/0:26,0:26:60.19:0,60,1090	0/0:26,0:26:66.18:0,66,1189	0/0:35,0:35:87.28:0,87,1630	0/0:33,0:33:87.30:0,87,1668	0/0:36,0:36:99:0,99,1789	0/0:20,0:20:54.13:0,54,961	0/0:21,0:21:51.16:0,51,905	0/0:18,0:18:39.13:0,39,741	0/0:26,0:26:72.23:0,72,1300	0/0:19,0:19:42.11:0,42,748	0/0:20,0:20:39.13:0,39,734	0/0:33,0:33:81.23:0,81,1513	1/1:4,26:31:54.18:1523,54,0	0/0:25,0:24:57.20:0,57,1104	0/0:26,0:26:69.22:0,69,1253	0/0:15,0:15:45.15:0,45,829
chr10	109088579	.	CAGTCCTCCTTTGTTCCTG	C	8180.68	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.199;DP=766;FS=21.419;HRun=0;HaplotypeScore=358.2530;InbreedingCoeff=0.9546;MQ=84.15;MQ0=0;MQRankSum=-11.991;QD=92.96;ReadPosRankSum=0.940;VQSLOD=3.6783;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,129,9026	0/0:10,0:10:30.10:0,30,2367	0/0:31,0:31:90.31:0,90,6371	0/0:27,0:27:66.13:0,66,4596	1/1:1,8:9:2.57:154,3,0	1/1:3,10:13:30.10:1441,30,0	1/1:6,19:25:39.13:1833,39,0	0/0:34,0:34:99:0,99,7266	1/1:6,24:30:66.23:3390,66,0	0/0:29,0:29:84.29:0,84,6352	0/0:21,0:21:59.79:0,60,4642	0/0:47,0:47:99:0,135,10250	0/0:33,0:33:84.29:0,84,6740	0/0:43,0:43:99:0,129,10519	0/0:39,0:39:99:0,114,9401	0/0:30,0:30:90.30:0,90,7527	0/0:39,0:39:99:0,114,9263	0/0:23,0:23:66.23:0,66,5313	0/0:22,0:22:66.23:0,66,4938	0/0:16,0:16:48.16:0,48,3652	0/0:48,0:48:99:0,138,10919	0/0:17,0:17:51.18:0,51,4214	0/0:21,0:21:60.19:0,60,4248	0/0:42,0:42:99:0,126,9925	1/1:0,11:11:27.09:1363,27,0	0/0:35,0:35:99:0,105,7411	0/0:15,0:15:39.13:0,39,3244	0/0:9,0:9:27.09:0,27,2141
chr10	109089275	.	C	CCT	1988.76	PASS	AB=0.776;AC=17;AF=0.304;AN=56;BaseQRankSum=0.162;DP=389;FS=12.720;HRun=0;HaplotypeScore=86.9148;InbreedingCoeff=-0.0302;MQ=69.66;MQ0=1;MQRankSum=-0.352;QD=8.57;ReadPosRankSum=7.185;VQSLOD=1.6015;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,2:22:9.39:9,0,79	0/0:4,0:4:2.98:0,3,22	0/0:6,0:3:5.52:0,6,53	0/0:11,0:10:19.95:0,20,120	0/1:7,0:7:7.05:7,0,16	0/0:7,0:7:0.38:0,0,21	0/1:20,0:20:14.56:15,0,98	0/1:5,3:10:13.71:68,0,14	0/1:8,0:8:10.23:10,0,64	0/0:8,0:8:11.99:0,12,130	0/0:9,0:9:12:0,12,128	0/0:20,0:20:9:0,9,79	0/0:14,0:14:18.46:0,18,153	0/0:15,0:15:11.99:0,12,100	0/0:16,0:16:23.91:0,24,204	0/0:8,0:8:15.02:0,15,187	0/1:13,12:32:18.65:475,0,19	0/1:10,26:40:30.94:739,0,31	1/1:10,0:11:3.04:218,3,0	0/1:6,3:10:35.34:40,0,35	0/1:13,2:28:4.35:155,0,4	0/0:6,0:6:4.25:0,4,28	0/0:8,0:8:11.69:0,12,94	0/0:25,0:25:42.45:0,42,368	0/1:8,0:8:10.02:10,0,21	1/1:7,2:17:20.42:218,20,0	0/1:7,5:15:45.89:140,0,46	1/1:2,0:2:3.01:43,3,0
chr10	109094841	.	AGGT	A	10367.26	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=21.773;DP=727;FS=0.272;HRun=0;HaplotypeScore=193.3439;InbreedingCoeff=0.9972;MQ=79.53;MQ0=0;MQRankSum=-20.457;QD=32.30;ReadPosRankSum=-4.159;VQSLOD=4.1181;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:62.76:643,63,0	0/0:19,0:19:57.20:0,57,1405	0/0:22,0:22:60.19:0,60,1204	0/0:25,0:25:68.81:0,69,1368	1/1:1,24:25:64.08:553,64,0	1/1:6,24:30:90:1048,90,0	1/1:1,20:21:63.11:704,63,0	1/1:0,28:28:81.23:985,81,0	1/1:3,27:30:90.25:1113,90,0	0/0:46,0:46:99:0,135,3274	0/0:23,0:23:66.23:0,66,1597	0/0:37,0:37:99:0,111,2711	0/0:27,0:27:81.28:0,81,1967	0/0:37,0:37:99:0,111,2733	0/0:40,0:40:99:0,120,2952	0/0:40,0:40:99:0,120,2890	1/1:2,6:8:23.92:237,24,0	1/1:0,5:5:15.05:194,15,0	1/1:2,10:12:33.10:404,33,0	1/1:1,19:20:60.09:677,60,0	1/1:5,15:20:45.05:498,45,0	0/0:32,0:32:96.33:0,96,2326	0/0:26,0:26:78.25:0,78,1867	0/0:32,0:32:96.33:0,96,2288	1/1:0,20:20:60.14:699,60,0	1/1:4,27:31:93.21:1096,93,0	1/1:3,33:36:99:1238,108,0	1/1:1,7:8:24.04:279,24,0
chr10	109094845	.	CTTG	C	10193.39	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=21.865;DP=722;FS=0.274;HRun=0;HaplotypeScore=191.4263;InbreedingCoeff=0.9977;MQ=80.83;MQ0=0;MQRankSum=-21.852;QD=33.20;ReadPosRankSum=-3.457;VQSLOD=4.4322;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:68.99:782,69,0	0/0:20,0:20:60.21:0,60,1474	0/0:23,0:23:66.16:0,66,1371	0/0:26,0:26:69.05:0,69,1465	1/1:1,24:25:64.08:563,64,0	1/1:4,24:28:84.01:997,84,0	1/1:0,20:20:60.10:677,60,0	1/1:1,26:27:75.71:935,76,0	1/1:4,27:31:90.02:1105,90,0	0/0:47,0:47:99:0,141,3391	0/0:22,0:22:66.23:0,66,1623	0/0:40,0:40:99:0,120,2931	0/0:27,0:27:81.26:0,81,1921	0/0:37,0:37:99:0,111,2659	0/0:41,0:41:99:0,123,2939	0/0:43,0:43:99:0,129,3080	1/1:2,6:8:21:234,21,0	1/1:1,5:6:18.02:215,18,0	1/1:0,10:10:30.10:376,30,0	1/1:1,19:20:60.09:693,60,0	1/1:1,15:16:42.05:473,42,0	0/0:32,0:32:96.31:0,96,2271	0/0:25,0:25:75.25:0,75,1757	0/0:32,0:32:96.27:0,96,2235	1/1:0,20:20:60.14:699,60,0	1/1:0,27:27:81.25:995,81,0	1/1:1,33:34:99:1190,102,0	1/1:0,7:7:21.07:258,21,0
chr10	109095419	.	C	CT	2250.43	PASS	AB=0.733;AC=33;AF=0.589;AN=56;BaseQRankSum=5.220;DP=443;FS=2.824;HRun=1;HaplotypeScore=119.2789;InbreedingCoeff=0.8093;MQ=70.76;MQ0=6;MQRankSum=-3.314;QD=9.54;ReadPosRankSum=-1.993;VQSLOD=0.6165;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,4:24:23.68:298,24,0	0/0:14,0:14:39.13:0,39,503	0/0:38,0:16:19.43:0,19,276	0/0:42,0:23:7.60:0,8,338	0/0:17,0:16:32.56:0,33,305	0/0:18,0:17:43.02:0,43,313	0/0:7,0:7:14.94:0,15,150	1/1:25,5:30:21.37:262,21,0	0/0:9,0:9:11.54:0,12,86	0/0:12,0:12:33.11:0,33,427	0/0:9,0:9:18.06:0,18,231	1/1:14,0:15:20.93:139,21,0	1/1:7,0:8:14.06:105,14,0	1/1:7,3:13:23.40:165,23,0	0/1:7,0:11:20.56:76,0,21	0/0:15,0:15:45.01:0,45,543	1/1:15,10:25:40.71:384,41,0	1/1:16,3:20:18.68:226,19,0	1/1:14,2:17:2.50:123,2,0	1/1:9,1:9:9.29:68,9,0	1/1:4,2:6:4.64:77,5,0	1/1:3,0:5:5.33:32,5,0	1/1:4,1:7:10.84:65,11,0	1/1:4,0:6:9.06:50,9,0	0/0:25,0:25:51.63:0,52,424	1/1:13,0:12:15.05:123,15,0	1/1:5,4:9:12.28:117,12,0	1/1:3,8:12:12.20:156,12,0
chr10	109095420	.	TC	T	3468.42	PASS	AB=0.898;AC=36;AF=0.643;AN=56;BaseQRankSum=1.552;DP=456;FS=2.528;HRun=1;HaplotypeScore=98.7183;InbreedingCoeff=0.6495;MQ=73.11;MQ0=6;MQRankSum=-1.402;QD=11.80;ReadPosRankSum=-6.198;VQSLOD=-0.3475;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:23:29.30:221,29,0	0/0:14,0:14:39.03:0,39,438	0/0:41,0:17:4.74:0,5,142	0/0:45,0:24:17.63:0,18,283	0/1:18,1:18:62.27:62,0,167	0/0:16,1:16:44.03:0,44,277	0/0:6,0:6:14.78:0,15,101	1/1:32,0:31:73.13:503,73,0	0/1:7,3:10:18.13:130,0,18	0/0:12,0:12:33.07:0,33,387	0/0:11,0:11:20.95:0,21,224	1/1:14,0:14:32.24:199,32,0	1/1:8,0:8:23.33:182,23,0	1/1:13,0:13:22.34:114,22,0	0/1:10,0:10:13.41:111,0,13	0/0:16,0:16:44.90:0,45,490	1/1:27,0:25:51.01:287,51,0	1/1:20,0:20:42.63:295,43,0	1/1:20,0:20:19.78:206,20,0	1/1:8,1:8:18.55:130,19,0	1/1:7,0:7:16.30:120,16,0	1/1:5,0:5:10.05:58,10,0	1/1:7,0:7:17.26:123,17,0	1/1:6,0:6:12.21:82,12,0	0/1:23,4:27:99:184,0,232	1/1:14,0:13:27.34:196,27,0	1/1:9,0:9:18.44:119,18,0	1/1:12,0:12:26.01:147,26,0
chr10	109095421	.	C	CT	4492.62	PASS	AB=0.968;AC=46;AF=0.821;AN=56;BaseQRankSum=2.350;DP=486;FS=2.837;HRun=11;HaplotypeScore=117.9386;InbreedingCoeff=0.6193;MQ=68.69;MQ0=8;MQRankSum=-0.591;QD=10.16;ReadPosRankSum=-3.648;VQSLOD=3.2689;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:50.16:353,50,0	0/0:18,0:18:26.84:0,27,209	0/1:44,0:19:0.54:1,0,79	0/1:42,0:21:0.98:1,0,103	1/1:16,7:21:27.03:256,27,0	1/1:6,12:17:39.07:391,39,0	1/1:5,1:6:6.01:61,6,0	1/1:33,0:32:60.58:477,61,0	1/1:9,1:10:20.97:184,21,0	0/0:15,0:15:23.56:0,24,174	0/0:10,0:11:17.83:0,18,134	1/1:16,0:16:29.08:173,29,0	1/1:8,0:8:12.27:84,12,0	1/1:13,0:13:24.03:168,24,0	0/1:12,0:12:0.32:96,0,0	0/1:15,2:17:28.04:28,0,176	1/1:27,0:25:45.24:399,45,0	1/1:21,0:21:27.74:300,28,0	1/1:20,0:21:25.74:171,26,0	1/1:12,0:10:10.16:69,10,0	1/1:8,0:8:13.52:125,14,0	1/1:5,0:5:6.27:34,6,0	1/1:8,0:8:13.96:79,14,0	1/1:6,0:6:9.14:53,9,0	1/1:21,8:29:36.13:495,36,0	1/1:15,0:14:20.39:148,20,0	1/1:10,0:10:15.87:142,16,0	1/1:11,0:11:23.77:206,24,0
chr10	109095442	.	CT	C	498.58	PASS	AB=0.860;AC=11;AF=0.196;AN=56;BaseQRankSum=1.653;DP=509;FS=15.498;HRun=10;HaplotypeScore=102.9547;InbreedingCoeff=0.5700;MQ=63.37;MQ0=16;MQRankSum=-2.907;QD=4.23;ReadPosRankSum=-0.788;VQSLOD=0.0961;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:41.87:0,42,399	0/0:17,0:17:48.13:0,48,530	0/1:51,2:16:8.96:9,0,48	0/0:41,0:19:22.55:0,23,158	0/0:26,0:22:57.05:0,57,586	0/0:17,0:15:30.17:0,30,297	0/0:5,0:5:11.99:0,12,119	0/0:37,0:36:73.63:0,74,735	0/0:11,0:11:33.06:0,33,351	0/0:17,0:17:40.73:0,41,387	0/0:15,0:15:36.08:0,36,389	1/1:10,6:16:18.20:168,18,0	0/0:7,0:7:17.64:0,18,175	0/0:14,0:14:21.41:0,21,165	0/1:5,4:9:9.45:136,0,9	0/1:15,1:16:16.70:17,0,269	0/0:32,0:30:48.70:0,49,757	0/0:20,0:19:50.92:0,51,535	0/0:23,0:22:48.65:0,49,482	0/0:15,0:13:35.46:0,35,369	0/0:10,0:10:17.96:0,18,176	1/1:1,4:5:8.99:78,9,0	1/1:5,6:11:17.60:151,18,0	1/1:2,5:7:11.77:103,12,0	0/0:27,0:27:66.09:0,66,701	0/0:11,1:11:4.02:0,4,271	0/0:14,0:14:1.01:0,1,207	0/0:5,0:5:6.01:0,6,62
chr10	109095460	.	CT	C	1187.41	PASS	AB=0.765;AC=24;AF=0.444;AN=54;BaseQRankSum=-2.215;DP=488;FS=2.479;HRun=13;HaplotypeScore=92.1947;InbreedingCoeff=0.6255;MQ=54.85;MQ0=14;MQRankSum=0.257;QD=5.42;ReadPosRankSum=1.350;VQSLOD=2.7385;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,1:22:7.52:0,8,169	0/0:18,2:20:4.21:0,4,343	0/0:27,1:6:0:0,0,1	0/0:24,0:9:2.84:0,3,14	1/1:10,11:19:5.28:154,5,0	1/1:6,9:14:14.25:95,14,0	1/1:1,5:6:11.93:87,12,0	0/0:24,0:30:35.74:0,36,211	1/1:5,10:16:19.82:137,20,0	0/0:16,0:16:26.99:0,27,252	0/0:13,1:13:20.96:0,21,182	1/1:10,5:16:4.66:27,5,0	1/1:6,8:14:9.75:68,10,0	1/1:6,5:11:14.82:109,15,0	0/1:5,9:14:3.43:110,0,3	0/1:12,2:14:22.78:23,0,125	0/1:24,2:32:2.38:2,0,279	0/0:17,0:21:38.05:0,38,267	0/0:11,0:19:40.25:0,40,232	0/0:8,0:17:39.88:0,40,228	0/0:3,0:9:11.63:0,12,72	1/1:1,7:8:17.90:131,18,0	0/1:5,7:12:5.36:129,0,5	1/1:3,9:12:20.71:152,21,0	1/1:16,8:24:20.42:153,20,0	0/0:8,0:14:26.57:0,27,197	0/0:7,0:22:20.44:0,20,141	./.
chr10	109096951	.	T	TTTG	6093.33	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-11.209;DP=804;FS=0.386;HRun=0;HaplotypeScore=111.1991;InbreedingCoeff=0.9982;MQ=64.37;MQ0=4;MQRankSum=-0.918;QD=42.31;ReadPosRankSum=1.532;VQSLOD=6.1691;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:93.77:0,94,1318	0/0:12,0:12:27.08:0,27,369	0/0:47,0:31:20.90:0,21,716	0/0:34,0:26:47.63:0,48,620	1/1:7,39:46:99:2207,117,0	1/1:5,12:17:24.08:490,24,0	1/1:8,20:29:51.17:1014,51,0	0/0:31,0:31:57.19:0,57,795	1/1:4,21:26:54.19:1102,54,0	0/0:31,0:31:60.19:0,60,841	0/0:23,0:23:57.18:0,57,802	0/0:29,0:29:78.26:0,78,1113	0/0:26,0:26:66.18:0,66,907	0/0:19,0:19:48.15:0,48,675	0/0:26,0:26:69.23:0,69,983	0/0:17,0:17:42.14:0,42,605	0/0:28,0:28:35.18:0,35,716	0/0:38,0:38:80.11:0,80,1179	0/0:25,0:24:48.12:0,48,637	0/0:32,0:33:84.22:0,84,1151	0/0:29,0:29:54.17:0,54,749	0/0:31,0:31:69.23:0,69,994	0/0:27,0:27:51.15:0,51,700	0/0:38,0:39:84.25:0,84,1186	1/1:4,22:26:63.22:1280,63,0	0/0:26,0:26:63.20:0,63,890	0/0:28,0:28:60.18:0,60,844	0/0:17,0:17:36.12:0,36,519
chr10	109097820	.	GGGTT	G	5223.93	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.804;DP=770;FS=0.845;HRun=0;HaplotypeScore=123.6386;InbreedingCoeff=1.0000;MQ=77.71;MQ0=0;MQRankSum=-2.593;QD=45.03;ReadPosRankSum=2.652;VQSLOD=5.0317;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,3138	0/0:16,0:16:45.15:0,45,1207	0/0:27,0:27:75.26:0,75,1952	0/0:21,0:21:57.16:0,57,1445	1/1:0,22:22:45.15:849,45,0	1/1:0,23:23:63.22:1196,63,0	1/1:5,19:24:51.17:963,51,0	0/0:37,0:37:99:0,105,2826	1/1:1,27:28:72.25:1363,72,0	0/0:23,0:23:63.22:0,63,1637	0/0:16,0:16:48.12:0,48,1227	0/0:32,0:32:84.29:0,84,2252	0/0:25,0:25:72.25:0,72,1917	0/0:25,0:25:72.25:0,72,1934	0/0:31,0:31:90.31:0,90,2397	0/0:29,0:29:75.26:0,75,1976	0/0:42,0:42:99:0,123,3194	0/0:23,0:23:63.20:0,63,1580	0/0:18,0:17:54.19:0,54,1405	0/0:19,0:19:57.18:0,57,1476	0/0:53,0:53:99:0,157,4116	0/0:26,0:26:72.25:0,72,1942	0/0:26,0:26:78.18:0,78,1919	0/0:39,0:39:99:0,117,3081	1/1:1,18:19:45.15:854,45,0	0/0:32,0:32:90.31:0,90,2358	0/0:39,0:38:99:0,108,2850	0/0:14,0:14:39.13:0,39,1043
chr10	109099111	.	AATGT	A	6187.80	PASS	AB=0.694;AC=24;AF=0.480;AN=50;BaseQRankSum=-0.059;DP=863;FS=1.887;HRun=0;HaplotypeScore=158.4705;InbreedingCoeff=0.8312;MQ=68.70;MQ0=5;MQRankSum=-0.778;QD=15.43;ReadPosRankSum=-0.078;VQSLOD=4.1865;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:32,20:52:9.44:634,0,9	0/0:20,0:20:30.10:0,30,680	./.	./.	1/1:20,23:43:57.11:837,57,0	1/1:18,10:31:35.83:463,36,0	1/1:21,8:29:15.04:201,15,0	./.	0/0:32,0:32:54.17:0,54,1155	0/0:49,0:49:69.22:0,69,1469	0/0:20,0:20:21.07:0,21,489	0/0:16,0:30:42.10:0,42,675	0/0:18,0:37:48.16:0,48,849	0/0:28,0:48:54.17:0,54,965	0/0:24,0:39:42.11:0,42,692	0/0:34,0:34:42.14:0,42,940	1/1:11,14:25:36.09:527,36,0	1/1:14,12:26:33.11:500,33,0	1/1:15,5:20:15.03:208,15,0	1/1:18,16:34:45.15:691,45,0	1/1:20,20:41:36.12:553,36,0	0/0:14,0:29:48.15:0,48,818	0/0:14,0:30:29.98:0,30,456	0/0:17,0:22:9.03:0,9,157	0/1:12,12:24:19.15:399,0,19	1/1:17,15:32:45.11:622,45,0	1/1:19,6:24:15.05:230,15,0	1/1:10,9:19:21.07:322,21,0
chr10	109100369	.	CT	C	4484.35	PASS	AB=0.712;AC=38;AF=0.679;AN=56;BaseQRankSum=7.121;DP=492;FS=0.495;HRun=13;HaplotypeScore=94.4493;InbreedingCoeff=0.4138;MQ=54.43;MQ0=4;MQRankSum=2.393;QD=11.21;ReadPosRankSum=3.901;VQSLOD=4.6896;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:56.64:416,57,0	0/0:10,0:10:23.99:0,24,224	0/0:4,0:3:3:0,3,26	0/0:5,0:3:1.31:0,1,9	1/1:2,11:13:29.80:219,30,0	0/1:17,14:31:65.98:234,0,66	1/1:2,10:12:23.84:175,24,0	1/1:14,15:29:9.39:230,9,0	1/1:2,12:15:28.85:203,29,0	0/0:22,1:25:17.25:0,17,283	0/0:20,0:20:38.63:0,39,317	1/1:8,5:14:19.84:137,20,0	0/1:14,6:20:5.19:129,0,5	1/1:3,14:17:19.26:243,19,0	1/1:4,12:17:2.71:174,3,0	0/0:27,0:27:20.02:0,20,460	1/1:4,15:19:20.59:303,21,0	1/1:5,19:24:47.71:350,48,0	0/1:7,2:9:31.80:32,0,46	1/1:3,15:18:34.61:250,35,0	0/1:8,8:14:25.13:107,0,25	1/1:4,9:14:28.84:201,29,0	1/1:5,13:20:24.89:165,25,0	1/1:4,13:17:35.75:261,36,0	1/1:3,13:16:31.86:225,32,0	0/1:13,15:28:6.04:244,0,6	0/1:11,10:21:28.58:145,0,29	1/1:2,2:4:5.95:44,6,0
chr10	109100463	.	C	CA	3596.81	PASS	AB=0.992;AC=18;AF=0.333;AN=54;BaseQRankSum=11.521;DP=488;FS=9.118;HRun=1;HaplotypeScore=101.8389;InbreedingCoeff=0.5037;MQ=42.18;MQ0=58;MQRankSum=-6.161;QD=18.26;ReadPosRankSum=-1.474;VQSLOD=2.7128;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:45.15:0,45,582	0/0:13,0:13:33.05:0,33,407	0/0:7,0:2:5.97:0,6,58	./.	1/1:0,23:23:63.13:862,63,0	1/1:1,20:21:57.11:779,57,0	1/1:2,12:13:36.02:474,36,0	0/0:16,0:9:24.01:0,24,265	1/1:0,10:10:30.10:433,30,0	0/0:24,0:22:57.16:0,57,701	0/0:16,0:13:21.07:0,21,272	0/1:14,0:14:11.83:12,0,37	0/1:15,0:14:16.32:16,0,37	1/1:13,0:8:4.96:14,5,0	0/1:22,0:18:8.61:9,0,33	0/1:18,1:17:3.73:4,0,420	0/0:21,0:16:33.11:0,33,427	0/0:26,0:24:57.19:0,57,739	0/0:17,0:11:33.11:0,33,428	0/0:13,0:13:30.10:0,30,389	0/0:43,0:34:72.23:0,72,934	0/1:12,0:12:13.47:41,0,13	0/1:10,0:8:5.99:6,0,9	0/0:24,0:21:5.06:0,5,55	1/1:0,24:23:66.22:948,66,0	0/0:17,0:16:42.14:0,42,545	0/0:23,0:22:48.16:0,48,621	0/0:6,0:5:15.05:0,15,194
chr10	109100465	.	G	GC	3785.26	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=7.072;DP=490;FS=2.480;HRun=3;HaplotypeScore=103.0944;InbreedingCoeff=0.9417;MQ=42.08;MQ0=63;MQRankSum=-2.497;QD=18.20;ReadPosRankSum=0.437;VQSLOD=3.1994;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:45.14:0,45,536	0/0:13,0:13:33.10:0,33,395	0/0:8,0:2:6.02:0,6,67	0/0:7,0:1:3.01:0,3,34	1/1:26,0:25:23.50:385,23,0	1/1:22,0:22:50.77:388,51,0	1/1:12,0:11:29.76:220,30,0	0/0:15,0:8:21.06:0,21,252	1/1:12,0:11:29.54:202,30,0	0/0:22,0:20:57.17:0,57,684	0/0:15,0:13:21.06:0,21,249	1/1:1,13:14:24.08:335,24,0	1/1:1,13:12:17.85:251,18,0	1/1:2,12:9:9.03:126,9,0	1/1:0,22:18:39.13:532,39,0	0/0:19,0:17:13.19:0,13,373	0/0:21,0:15:33.10:0,33,396	0/0:25,0:23:57.17:0,57,684	0/0:17,0:11:33.10:0,33,389	0/0:13,0:13:30.09:0,30,360	0/0:44,0:35:72.22:0,72,864	1/1:1,11:12:27.09:376,27,0	1/1:1,9:8:15.05:209,15,0	1/1:2,23:22:23.91:336,24,0	1/1:25,0:24:31.51:426,32,0	0/0:15,0:14:42.13:0,42,504	0/0:22,0:21:48.15:0,48,572	0/0:6,0:5:15.05:0,15,179
chr10	109100556	.	C	CGACT	2494.04	PASS	AC=10;AF=0.227;AN=44;BaseQRankSum=4.173;DP=419;FS=10.008;HRun=0;HaplotypeScore=72.4495;InbreedingCoeff=0.6504;MQ=26.74;MQ0=188;MQRankSum=-2.991;QD=39.59;ReadPosRankSum=-0.687;VQSLOD=2.6253;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:6:3.01:0,3,52	0/0:12,0:11:24.08:0,24,378	./.	0/0:10,0:1:1.82:0,2,5	1/1:9,15:23:45.15:1128,45,0	1/1:4,3:6:9.03:227,9,0	1/1:2,2:2:6.02:151,6,0	./.	1/1:3,10:8:21.07:529,21,0	0/0:18,0:15:27.09:0,27,466	0/0:13,0:12:24.08:0,24,361	0/0:20,0:12:2.80:0,3,52	0/0:11,0:5:2.82:0,3,52	./.	./.	0/0:18,0:10:8.30:0,8,149	0/0:26,0:8:3.01:0,3,52	./.	0/0:12,0:3:9.03:0,9,155	0/0:17,0:17:45.15:0,45,760	0/0:36,0:9:2.76:0,3,20	0/0:11,0:9:12:0,12,163	0/0:11,0:10:8.78:0,9,128	./.	1/1:7,8:15:24.08:605,24,0	0/0:14,0:11:24.08:0,24,411	0/0:17,0:10:8.79:0,9,138	0/0:3,0:3:3.90:0,4,53
chr10	109101844	.	G	GT	2330.50	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=2.644;DP=642;FS=6.520;HRun=9;HaplotypeScore=126.0042;InbreedingCoeff=0.9963;MQ=72.65;MQ0=5;MQRankSum=-9.041;QD=21.00;ReadPosRankSum=0.045;VQSLOD=2.5308;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:17:26.95:0,27,230	0/0:15,0:15:44.99:0,45,391	0/0:25,0:22:61.45:0,61,516	0/0:28,0:24:49.24:0,49,419	1/1:7,28:37:68.88:696,69,0	1/1:3,16:19:51.11:551,51,0	1/1:2,8:10:21.06:232,21,0	0/0:25,0:25:44.91:0,45,390	1/1:5,12:17:39.11:431,39,0	0/0:31,0:31:80.95:0,81,699	0/0:19,1:20:20.79:0,21,406	0/0:22,0:22:56.99:0,57,495	0/0:24,0:24:56.97:0,57,495	0/0:28,0:28:68.97:0,69,595	0/0:14,0:14:26.99:0,27,234	0/0:19,0:19:41.95:0,42,359	0/0:26,0:26:65.96:0,66,567	0/0:21,0:20:33.94:0,34,377	0/0:15,0:15:29.93:0,30,257	0/0:30,0:29:83.98:0,84,729	0/0:13,0:13:35.98:0,36,312	0/0:20,1:21:20.79:0,21,409	0/0:29,0:29:71.89:0,72,624	0/0:24,0:24:56.99:0,57,495	1/1:7,20:28:56.96:595,57,0	0/0:32,0:32:80.90:0,81,697	0/0:33,0:33:74.97:0,75,651	0/0:16,0:16:44.03:0,44,371
chr10	109101858	.	TTTTG	T	14307.66	PASS	AB=0.558;AC=43;AF=0.768;AN=56;BaseQRankSum=10.424;DP=617;FS=0.971;HRun=0;HaplotypeScore=120.4021;InbreedingCoeff=0.8818;MQ=66.74;MQ0=7;MQRankSum=-0.589;QD=29.38;ReadPosRankSum=1.447;VQSLOD=4.9055;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,10:14:15.05:246,15,0	0/0:16,0:16:39.13:0,39,946	0/0:21,0:16:12.04:0,12,239	0/0:25,0:21:17.97:0,18,302	1/1:6,28:34:81.19:1266,81,0	1/1:11,11:22:54.13:830,54,0	1/1:6,3:9:15.04:222,15,0	1/1:12,15:27:45.11:648,45,0	1/1:5,11:16:36.07:537,36,0	0/0:29,0:29:57.20:0,57,1290	0/0:20,0:20:54.17:0,54,1256	1/1:4,18:22:45.15:737,45,0	1/1:7,17:24:41.85:688,42,0	1/1:6,20:26:48.16:786,48,0	1/1:4,10:14:18.06:295,18,0	0/0:19,0:19:48.15:0,48,1118	1/1:6,18:24:45.15:726,45,0	1/1:6,14:19:4.44:508,4,0	1/1:7,9:15:24.08:393,24,0	1/1:6,27:32:78.19:1208,78,0	1/1:7,6:13:15.01:217,15,0	1/1:4,16:20:48.08:726,48,0	1/1:9,17:27:48.16:756,48,0	1/1:6,18:24:39.13:639,39,0	1/1:14,13:27:54.14:849,54,0	0/1:6,23:29:3.71:952,0,4	1/1:8,21:29:50.69:835,51,0	1/1:8,7:15:15.05:246,15,0
chr10	109102214	.	GT	G	3664.24	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.208;DP=715;FS=3.465;HRun=3;HaplotypeScore=69.8032;InbreedingCoeff=0.9608;MQ=78.88;MQ0=0;MQRankSum=-1.395;QD=32.72;ReadPosRankSum=1.558;VQSLOD=4.1732;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,1986	0/0:11,0:11:33.10:0,33,456	0/0:14,0:15:3.10:0,3,418	0/0:28,0:28:78.15:0,78,1027	1/1:0,24:24:63.07:737,63,0	1/1:2,21:23:60.19:736,60,0	1/1:0,19:19:54.17:669,54,0	0/0:27,0:27:78.71:0,79,1089	1/1:2,20:22:57.18:706,57,0	0/0:23,0:23:56.99:0,57,759	0/0:13,0:13:39.12:0,39,539	0/0:42,0:42:99:0,126,1758	0/0:20,0:20:60.20:0,60,863	0/0:18,0:18:54.17:0,54,758	0/0:42,0:42:99:0,123,1724	0/0:48,0:48:99:0,138,1962	0/0:33,0:33:96.24:0,96,1300	0/0:22,0:22:66.22:0,66,949	0/0:11,0:11:33.09:0,33,440	0/0:17,0:17:45.15:0,45,648	0/0:44,0:44:99:0,126,1769	0/0:23,0:23:63.21:0,63,898	0/0:24,0:24:72.23:0,72,1015	0/0:24,0:24:72.20:0,72,1012	1/1:0,24:24:66.21:816,66,0	0/0:17,0:17:48.16:0,48,685	0/0:40,0:40:99:0,117,1643	0/0:14,0:14:42.14:0,42,604
chr10	109102887	.	TCCTCCTC	T	129.10	PASS	AB=1.000;AC=5;AF=0.147;AN=34;BaseQRankSum=0.286;DP=157;FS=11.803;HRun=0;HaplotypeScore=22.2667;InbreedingCoeff=0.2468;MQ=35.35;MQ0=52;MQRankSum=-0.164;QD=6.46;ReadPosRankSum=-0.573;VQSLOD=-0.3648;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:2:2.92:0,3,7	./.	0/0:14,0:1:3.01:0,3,38	0/0:11,0:1:3.01:0,3,41	./.	0/0:2,0:1:2.99:0,3,24	0/1:8,0:4:25.07:96,0,25	./.	1/1:5,0:3:6.02:101,6,0	0/0:6,0:3:9.03:0,9,212	./.	0/0:8,0:6:6.02:0,6,126	0/0:5,0:2:3.01:0,3,96	0/0:10,0:8:12.04:0,12,255	0/0:6,0:4:2.97:0,3,20	0/0:10,0:6:15.05:0,15,424	0/0:5,0:3:7.08:0,7,46	0/0:6,0:3:3.59:0,4,9	./.	./.	0/0:22,0:13:16.45:0,16,247	./.	./.	0/0:7,0:3:6.02:0,6,74	1/1:0,7:7:3:29,3,0	./.	./.	./.
chr10	109103503	.	C	CCT	436.89	PASS	AB=1.000;AC=17;AF=0.425;AN=40;BaseQRankSum=-2.702;DP=126;FS=0.000;HRun=0;HaplotypeScore=22.3816;InbreedingCoeff=0.4691;MQ=41.40;MQ0=10;MQRankSum=-3.583;QD=7.40;ReadPosRankSum=-0.232;VQSLOD=2.4052;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:7:0.34:2,0,0	./.	0/0:4,0:1:3.01:0,3,45	0/0:4,0:2:4.77:0,5,24	./.	1/1:1,7:7:20.95:238,21,0	1/1:0,4:2:6.01:76,6,0	1/1:8,0:8:14.48:92,14,0	1/1:0,4:3:3.01:48,3,0	0/0:6,0:4:8.93:0,9,92	0/0:4,0:4:0:0,0,0	0/0:8,0:5:10.10:0,10,75	0/1:4,0:3:0:0,0,0	0/0:3,0:1:2.94:0,3,18	1/1:7,0:4:1.36:6,1,0	0/0:4,0:3:6.02:0,6,74	./.	0/0:4,0:3:0:0,0,0	0/0:2,0:1:1.82:0,2,5	0/0:3,0:3:2.37:0,2,8	./.	./.	./.	./.	1/1:1,4:6:6.02:69,6,0	1/1:6,0:6:0.76:25,1,0	0/0:7,0:3:1.82:0,2,5	./.
chr10	109104094	.	TGTGA	T	3666.12	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.117;DP=686;FS=5.190;HRun=0;HaplotypeScore=112.9920;InbreedingCoeff=0.9973;MQ=88.24;MQ0=1;MQRankSum=-4.058;QD=39.00;ReadPosRankSum=2.604;VQSLOD=3.6424;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,160,4094	0/0:7,0:7:18.06:0,18,454	0/0:26,0:26:72.21:0,72,1787	0/0:29,0:29:69.24:0,69,1733	1/1:1,18:19:42.14:755,42,0	1/1:4,14:17:30.10:539,30,0	1/1:2,23:25:60.21:1078,60,0	0/0:29,0:29:78.25:0,78,1913	1/1:0,15:15:36.12:647,36,0	0/0:26,0:26:66.23:0,66,1672	0/0:8,0:8:24.08:0,24,587	0/0:25,0:25:75.26:0,75,1920	0/0:28,0:28:78.27:0,78,2024	0/0:29,0:29:81.28:0,81,2070	0/0:30,0:30:90.31:0,90,2323	0/0:20,0:20:57.20:0,57,1449	0/0:30,0:30:81.28:0,81,2103	0/0:23,0:23:63.22:0,63,1625	0/0:17,0:17:45.15:0,45,1157	0/0:22,0:22:60.21:0,60,1546	0/0:50,0:50:99:0,141,3542	0/0:14,0:14:30.10:0,30,771	0/0:21,0:21:57.20:0,57,1481	0/0:32,0:32:84.29:0,84,2182	1/1:2,15:17:36.12:647,36,0	0/0:23,0:23:63.22:0,63,1624	0/0:26,0:26:75.24:0,75,1891	0/0:17,0:17:42.14:0,42,1091
chr10	109107564	.	AGT	A	1246.64	PASS	AB=0.960;AC=22;AF=0.407;AN=54;BaseQRankSum=4.117;DP=526;FS=1.311;HRun=0;HaplotypeScore=120.6830;InbreedingCoeff=0.3913;MQ=64.11;MQ0=5;MQRankSum=-3.921;QD=4.58;ReadPosRankSum=-1.490;VQSLOD=2.9754;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,8:29:10.98:87,11,0	0/0:6,0:6:15.05:0,15,238	0/0:25,0:18:11.68:0,12,123	0/0:31,0:19:18.04:0,18,229	0/0:9,0:8:0.89:0,1,2	0/1:12,0:12:16.38:16,0,19	0/1:35,0:34:14.70:15,0,246	1/1:9,3:13:14.76:132,15,0	0/1:14,0:14:16.63:49,0,17	0/0:23,1:25:4.40:0,4,621	0/0:8,0:8:15.05:0,15,238	0/0:28,0:28:34.37:0,34,726	0/0:15,0:15:9.67:0,10,458	0/0:18,0:19:20.99:0,21,261	0/0:20,0:20:9.37:0,9,324	0/0:18,1:19:6.60:0,7,580	1/1:8,8:15:9.01:95,9,0	1/1:8,9:17:32.96:322,33,0	1/1:14,2:16:6.45:105,6,0	1/1:2,1:3:3.01:35,3,0	1/1:46,15:56:29.44:251,29,0	0/1:6,0:6:9.17:9,0,128	0/0:13,0:13:4.37:0,4,306	0/0:31,0:30:18.38:0,18,511	0/1:16,0:16:16.48:16,0,17	0/1:15,6:22:19.36:231,0,19	1/1:9,1:10:8.29:66,8,0	./.
chr10	109107586	.	TGC	T	1239.84	PASS	AB=0.946;AC=30;AF=0.536;AN=56;BaseQRankSum=5.953;DP=435;FS=3.576;HRun=0;HaplotypeScore=102.1237;InbreedingCoeff=-0.1943;MQ=44.72;MQ0=18;MQRankSum=-5.325;QD=3.43;ReadPosRankSum=-2.826;VQSLOD=1.9155;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:17:2.79:38,3,0	0/0:7,0:7:18.04:0,18,311	0/1:10,0:4:0.11:0,0,66	0/0:18,1:6:12:0,12,150	1/1:1,1:6:2.99:23,3,0	1/1:5,5:10:3.01:41,3,0	0/1:15,9:26:29.94:190,0,30	0/1:13,0:12:20.58:132,0,21	1/1:10,4:15:17.78:208,18,0	0/0:23,0:23:48.27:0,48,864	0/0:6,0:6:15.05:0,15,288	0/1:22,1:22:38.65:39,0,290	0/1:16,1:16:28.53:29,0,187	0/1:15,0:15:24.82:25,0,78	0/1:14,1:15:86.79:87,0,114	0/0:19,0:19:35.18:0,35,750	1/1:16,0:14:0.23:53,0,0	0/1:20,0:17:6.65:110,0,7	0/1:11,0:9:19.15:19,0,41	1/1:4,0:3:2.88:15,3,0	0/1:55,0:43:32.79:37,0,33	0/1:7,1:7:54.62:55,0,73	0/1:14,0:13:20.77:21,0,127	0/1:21,2:21:9.88:10,0,207	1/1:6,6:13:12:106,12,0	0/1:17,0:16:62.66:132,0,63	0/1:3,1:4:9.05:32,0,9	0/1:5,0:5:2.33:2,0,14
chr10	109107588	.	CGTGT	C	1037.17	PASS	AB=0.948;AC=17;AF=0.304;AN=56;BaseQRankSum=7.839;DP=429;FS=8.357;HRun=0;HaplotypeScore=111.1082;InbreedingCoeff=0.1064;MQ=44.09;MQ0=21;MQRankSum=-7.442;QD=4.65;ReadPosRankSum=-0.345;VQSLOD=1.4758;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,1:17:4.96:23,0,5	0/0:7,0:7:18.06:0,18,465	0/0:10,0:4:8.94:0,9,110	0/0:17,0:5:12:0,12,165	0/0:7,0:6:0:0,0,0	0/1:10,0:9:18.42:18,0,19	0/1:25,0:24:83.15:83,0,153	0/1:13,0:12:2.09:195,0,2	0/1:15,0:15:6.97:77,0,7	0/0:23,0:22:63.10:0,63,1387	0/0:6,0:6:15.05:0,15,419	0/0:22,0:21:54.16:0,54,1095	0/0:16,0:15:32.30:0,32,733	0/0:16,0:15:23.84:0,24,393	0/0:16,0:16:35.94:0,36,515	0/0:19,0:19:51.12:0,51,1150	1/1:13,3:14:6.39:76,6,0	1/1:14,5:16:25.73:301,26,0	0/1:8,1:7:17.72:45,0,18	1/1:4,0:3:2.96:19,3,0	0/1:53,1:42:15.98:37,0,16	0/0:8,0:7:12.03:0,12,254	0/0:15,0:14:24.06:0,24,530	0/0:23,0:21:35.72:0,36,816	0/1:14,0:13:34.56:35,0,36	0/1:12,4:15:99:255,0,140	0/1:3,1:4:12.63:18,0,13	0/1:5,0:5:9.90:19,0,10
chr10	109107590	.	TGTGC	T	1028.71	PASS	AB=0.958;AC=25;AF=0.446;AN=56;BaseQRankSum=6.830;DP=416;FS=10.199;HRun=0;HaplotypeScore=107.6868;InbreedingCoeff=0.4618;MQ=41.51;MQ0=25;MQRankSum=-6.659;QD=4.63;ReadPosRankSum=-3.163;VQSLOD=0.7566;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:16:15.18:23,0,15	0/0:7,0:7:18.06:0,18,423	0/0:8,0:2:3.01:0,3,44	0/0:15,0:4:3.01:0,3,55	1/1:7,0:6:2.98:22,3,0	1/1:6,4:9:3:26,3,0	0/1:19,7:23:26.91:224,0,27	1/1:12,0:10:16.72:111,17,0	1/1:11,4:14:22.54:215,23,0	0/0:24,0:23:60.17:0,60,1364	0/0:6,0:6:15.05:0,15,404	0/0:23,0:22:51.02:0,51,1026	0/0:17,0:16:26.90:0,27,726	0/0:15,0:14:17.47:0,17,316	0/0:15,0:15:20.65:0,21,391	0/0:19,0:19:48.12:0,48,1041	0/1:16,0:13:17.73:23,0,18	1/1:17,0:14:19.47:178,19,0	1/1:8,0:5:8.77:60,9,0	1/1:5,0:3:0.47:1,0,0	1/1:53,0:41:4.99:26,5,0	0/0:7,0:6:12.04:0,12,266	0/0:15,0:14:24.08:0,24,572	0/0:23,0:21:36.12:0,36,855	1/1:8,5:12:9.02:103,9,0	0/1:16,0:15:99:155,0,132	0/1:3,0:3:4.82:39,0,5	1/1:4,0:4:2.04:6,2,0
chr10	109107594	.	CGTGT	C	1253.35	PASS	AB=0.961;AC=27;AF=0.482;AN=56;BaseQRankSum=6.601;DP=386;FS=10.604;HRun=0;HaplotypeScore=98.8786;InbreedingCoeff=0.6114;MQ=40.94;MQ0=29;MQRankSum=-6.143;QD=6.08;ReadPosRankSum=-3.506;VQSLOD=0.4201;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:14:0.24:26,0,0	0/0:7,0:7:18.06:0,18,354	0/0:3,0:1:3:0,3,25	0/0:12,0:2:3.01:0,3,31	1/1:7,0:6:0.47:1,0,0	1/1:9,0:8:2.88:15,3,0	1/1:23,0:21:11.96:177,12,0	1/1:11,0:9:22.65:212,23,0	1/1:14,0:14:15.98:100,16,0	0/0:21,0:20:60.19:0,60,1323	0/0:6,0:6:15.05:0,15,393	0/0:21,0:20:48.13:0,48,896	0/0:17,0:16:29.43:0,29,653	0/0:13,0:12:17.80:0,18,279	0/0:15,0:15:26.93:0,27,408	0/0:18,0:18:48.08:0,48,983	0/1:15,1:13:40.46:77,0,40	1/1:15,1:13:23.63:305,24,0	1/1:8,0:4:8.96:98,9,0	1/1:3,0:1:2.97:20,3,0	1/1:47,1:36:8.82:54,9,0	0/0:6,0:5:12.04:0,12,247	0/0:15,0:14:24.08:0,24,546	0/0:26,0:21:35.70:0,36,773	1/1:10,0:10:5.98:47,6,0	0/1:15,1:15:99:253,0,123	1/1:3,0:3:5.37:35,5,0	1/1:4,0:4:3:25,3,0
chr10	109107614	.	T	TGC	104.94	PASS	AB=0.966;AC=11;AF=0.239;AN=46;BaseQRankSum=4.909;DP=373;FS=1.283;HRun=0;HaplotypeScore=91.9671;InbreedingCoeff=0.2565;MQ=35.68;MQ0=39;MQRankSum=-4.415;QD=0.79;ReadPosRankSum=1.341;VQSLOD=1.8190;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:6:15.01:0,15,201	./.	./.	./.	0/0:11,0:10:2.74:0,3,12	0/0:23,0:17:4.83:0,5,19	0/0:12,0:7:13.70:0,14,88	0/1:16,0:15:13.19:13,0,50	0/0:24,0:20:54.14:0,54,761	0/0:6,0:5:15.05:0,15,228	0/0:24,0:22:40.97:0,41,276	0/0:17,0:16:32.27:0,32,202	0/0:17,0:12:11.70:0,12,70	0/0:9,0:9:14.85:0,15,102	0/0:15,0:15:36.05:0,36,502	0/1:15,2:13:12.83:13,0,94	1/1:16,0:13:3.52:44,4,0	0/1:7,0:2:11.26:11,0,14	./.	0/1:47,1:34:0.13:0,0,0	0/0:7,0:6:8.87:0,9,57	0/0:14,0:13:17.75:0,18,127	0/0:21,0:17:26.63:0,27,174	0/0:13,0:11:5.64:0,6,27	0/1:20,1:17:73.38:81,0,73	1/1:5,0:4:2.69:14,3,0	1/1:2,1:3:3.01:53,3,0
chr10	109107636	.	TGC	T	73.01	PASS	AB=0.985;AC=11;AF=0.250;AN=44;BaseQRankSum=3.609;DP=333;FS=1.101;HRun=0;HaplotypeScore=65.9968;InbreedingCoeff=0.2289;MQ=30.72;MQ0=52;MQRankSum=-3.961;QD=0.48;ReadPosRankSum=-2.521;VQSLOD=0.3941;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:4:12.04:0,12,228	./.	./.	./.	0/1:9,0:8:0:0,0,0	0/1:24,0:16:0.20:0,0,0	0/1:17,0:7:31.40:31,0,34	1/1:14,1:13:6.77:66,7,0	0/0:22,0:17:28.73:0,29,729	0/0:3,0:2:6.02:0,6,115	0/0:14,3:15:18.06:0,18,293	0/0:11,0:9:12.82:0,13,180	0/0:18,0:12:2.71:0,3,25	0/0:4,0:4:6.02:0,6,107	0/0:15,0:15:30.07:0,30,544	0/1:11,1:10:8.68:55,0,9	0/0:15,0:12:2.70:0,3,86	0/0:3,0:1:3.01:0,3,33	./.	1/1:52,0:33:1.07:3,1,0	0/0:7,0:6:3.01:0,3,37	0/0:11,0:9:6.02:0,6,81	0/0:17,0:12:9.03:0,9,161	./.	0/1:20,0:15:15.04:15,0,109	0/0:3,0:2:2.04:0,2,6	1/1:4,0:3:2.84:14,3,0
chr10	109107642	.	CGTGTGTGT	C	934.76	PASS	AB=0.867;AC=14;AF=0.333;AN=42;BaseQRankSum=1.038;DP=345;FS=1.881;HRun=0;HaplotypeScore=69.9631;InbreedingCoeff=0.3637;MQ=29.32;MQ0=60;MQRankSum=-5.556;QD=6.45;ReadPosRankSum=0.626;VQSLOD=1.0740;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:4:12.04:0,12,357	./.	./.	./.	1/1:10,0:9:0.40:1,0,0	0/0:24,0:16:1.55:0,2,4	1/1:14,5:9:11.47:447,11,0	0/0:16,0:14:6.13:0,6,50	0/0:23,0:18:53.64:0,54,1365	0/0:4,0:3:6.02:0,6,146	0/0:19,0:16:15.34:0,15,252	0/0:10,0:8:5.44:0,5,175	0/0:20,0:13:3.24:0,3,41	0/0:6,0:5:3.01:0,3,69	0/0:15,0:15:21.16:0,21,800	0/1:12,1:13:32.80:33,0,178	1/1:15,1:12:4.17:271,4,0	1/1:4,0:1:2.84:14,3,0	./.	1/1:50,6:36:5.85:66,6,0	./.	0/0:7,0:5:3.01:0,3,47	0/0:17,0:12:6.02:0,6,98	./.	0/1:16,2:13:81.92:192,0,82	1/1:4,0:2:3.01:41,3,0	0/0:4,0:3:2.37:0,2,8
chr10	109107654	.	T	TGC	269.79	PASS	AB=0.971;AC=12;AF=0.316;AN=38;BaseQRankSum=2.812;DP=361;FS=0.000;HRun=0;HaplotypeScore=65.6492;InbreedingCoeff=0.1564;MQ=27.56;MQ0=63;MQRankSum=-2.801;QD=1.36;ReadPosRankSum=0.538;VQSLOD=1.4159;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:3:9.03:0,9,118	./.	./.	0/1:3,0:3:0:0,0,0	0/0:9,0:8:0:0,0,0	1/1:25,0:18:1.07:13,1,0	0/1:20,1:12:59.68:74,0,60	0/0:16,0:14:5.84:0,6,42	0/0:23,0:18:43.10:0,43,553	./.	0/0:19,0:16:8.71:0,9,126	0/0:9,0:7:10.93:0,11,99	1/1:20,0:12:0.26:0,0,0	0/0:6,0:5:3.01:0,3,43	0/0:13,0:13:15.01:0,15,215	0/1:16,0:12:21.36:21,0,69	0/1:18,1:14:2.14:130,0,2	./.	./.	1/1:64,1:40:5.50:41,6,0	./.	./.	./.	0/0:11,0:9:0:0,0,0	0/1:22,1:16:42.67:95,0,43	0/1:5,0:3:0.51:1,0,15	0/0:4,0:3:2.94:0,3,18
chr10	109107656	.	CGT	C	40.48	PASS	AB=0.970;AC=12;AF=0.300;AN=40;BaseQRankSum=2.788;DP=368;FS=0.988;HRun=0;HaplotypeScore=62.6741;InbreedingCoeff=0.0921;MQ=27.54;MQ0=61;MQRankSum=-2.227;QD=0.22;ReadPosRankSum=-0.731;VQSLOD=1.2709;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:3:8.62:0,9,125	./.	./.	0/1:3,0:3:0:0,0,0	0/1:10,0:9:0:0,0,0	0/1:31,1:25:10.86:26,0,11	0/1:22,0:12:11.54:12,0,58	0/0:14,1:13:0.35:0,0,13	0/0:23,0:18:35.14:0,35,626	./.	0/0:19,0:16:8.63:0,9,126	0/0:9,0:7:7.62:0,8,112	0/0:22,0:14:0:0,0,1	0/0:6,0:5:3.01:0,3,45	0/0:13,0:13:15.03:0,15,241	0/0:16,0:12:6.84:0,7,56	0/1:19,0:14:19.49:49,0,19	0/1:3,0:1:0:0,0,0	./.	1/1:64,0:40:2.60:10,3,0	./.	./.	./.	0/0:10,0:8:0:0,0,0	0/1:21,1:15:35.28:35,0,44	0/1:4,1:3:5.02:5,0,8	1/1:4,0:3:1.25:3,1,0
chr10	109107668	.	T	TGC	114.89	PASS	AB=0.962;AC=8;AF=0.190;AN=42;BaseQRankSum=2.976;DP=402;FS=1.039;HRun=0;HaplotypeScore=75.1395;InbreedingCoeff=0.1411;MQ=28.45;MQ0=59;MQRankSum=-1.381;QD=1.00;ReadPosRankSum=0.675;VQSLOD=1.0623;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:9,0:8:12.02:0,12,161	./.	./.	0/1:4,0:4:0:0,0,0	0/0:9,0:8:2.60:0,3,11	0/1:29,6:29:2.55:131,0,3	0/0:24,0:12:21.88:0,22,129	0/0:11,0:9:2.74:0,3,12	0/0:29,0:23:3.39:0,3,379	./.	0/0:17,0:13:9.37:0,9,61	0/1:10,1:10:1.77:2,0,22	1/1:21,1:15:0.17:0,0,0	0/0:8,0:7:3:0,3,25	0/0:13,0:13:8.70:0,9,212	0/0:17,0:12:13.23:0,13,78	0/1:21,0:16:41.61:63,0,42	0/1:7,0:3:5.47:5,0,18	./.	0/0:65,0:45:1.55:0,2,5	./.	./.	0/1:15,0:14:0:0,0,0	0/0:10,1:9:0:0,0,0	0/0:28,0:21:17.06:0,17,216	0/0:6,0:4:5.96:0,6,43	0/0:2,0:1:3:0,3,25
chr10	109107682	.	TGTGTGTGTGTGTGTGC	T	321.15	PASS	AB=0.994;AC=19;AF=0.380;AN=50;BaseQRankSum=1.820;DP=465;FS=9.510;HRun=0;HaplotypeScore=112.7609;InbreedingCoeff=0.3619;MQ=29.54;MQ0=50;MQRankSum=-1.800;QD=1.65;ReadPosRankSum=-2.050;VQSLOD=1.3069;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:10,0:9:12.50:0,13,283	1/1:7,0:2:0.63:3,1,0	0/0:8,0:2:4.35:0,4,17	0/1:4,0:4:0:0,0,0	0/1:8,0:7:0:0,0,0	1/1:34,0:29:8.74:86,9,0	0/0:19,0:11:16.64:0,17,132	0/1:14,0:14:0.94:17,0,1	0/0:26,0:20:50.19:0,50,903	0/0:6,0:5:3:0,3,25	1/1:17,0:14:8.96:104,9,0	1/1:14,0:13:16.55:171,17,0	0/1:23,1:19:3.42:12,0,3	1/1:11,0:11:1.73:16,2,0	0/0:14,0:14:29.55:0,30,526	0/1:21,0:15:15.90:16,0,61	0/0:25,0:20:5.74:0,6,131	0/1:12,0:7:15.52:16,0,34	1/1:5,0:5:2.94:18,3,0	0/0:71,0:52:1.25:0,1,3	./.	./.	0/1:24,0:23:0:0,0,1	0/0:9,0:8:0.47:0,0,1	0/0:32,0:27:5.58:0,6,372	0/0:8,0:6:3.90:0,4,39	0/0:3,0:2:5.96:0,6,44
chr10	109107696	.	TGC	T	1011.42	PASS	AB=0.899;AC=32;AF=0.640;AN=50;BaseQRankSum=-0.547;DP=415;FS=0.000;HRun=0;HaplotypeScore=75.0012;InbreedingCoeff=0.1643;MQ=30.70;MQ0=31;MQRankSum=0.331;QD=3.23;ReadPosRankSum=-0.993;VQSLOD=1.8455;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:7:10.52:0,11,128	0/0:15,0:3:0.40:0,0,19	0/0:15,0:4:4:0,4,26	0/1:3,2:5:0:0,0,0	0/0:6,0:5:0:0,0,0	1/1:25,2:24:8.92:130,9,0	1/1:14,0:9:6.29:44,6,0	1/1:11,1:12:2.90:16,3,0	0/1:20,5:22:99:119,0,193	0/0:6,0:5:3:0,3,25	1/1:14,0:11:2.94:18,3,0	1/1:14,0:14:5.55:77,6,0	1/1:20,0:18:7.90:51,8,0	1/1:12,1:13:2.56:17,3,0	0/1:13,0:13:32.99:191,0,33	0/1:22,0:18:21.49:21,0,34	1/1:18,0:14:4.03:106,4,0	1/1:11,0:8:9.52:70,10,0	1/1:6,0:6:3.78:39,4,0	1/1:58,1:45:2.64:40,3,0	./.	./.	0/0:22,0:22:0.11:0,0,0	0/1:7,1:8:0:0,0,0	0/1:21,1:19:22.99:102,0,23	1/1:6,1:6:5.74:36,6,0	1/1:3,0:2:6.01:62,6,0
chr10	109107719	.	GTGTC	G	1095.72	PASS	AB=0.933;AC=22;AF=0.407;AN=54;BaseQRankSum=4.086;DP=412;FS=46.663;HRun=0;HaplotypeScore=89.8351;InbreedingCoeff=-0.0134;MQ=40.28;MQ0=10;MQRankSum=0.690;QD=3.82;ReadPosRankSum=-2.448;VQSLOD=-0.2779;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:12:5.02:98,0,5	0/0:3,0:3:5.98:0,6,47	0/0:31,0:8:15.85:0,16,118	0/0:31,0:7:14.78:0,15,204	0/0:3,1:4:0:0,0,0	0/1:0,7:7:0:0,0,0	1/1:18,3:19:24.37:236,24,0	0/1:10,0:9:38.79:39,0,42	1/1:3,9:12:3.01:44,3,0	0/0:14,0:13:27.50:0,28,423	0/0:5,0:4:9.03:0,9,173	0/1:13,0:12:6.08:53,0,6	0/1:14,0:14:15.10:133,0,15	0/1:22,0:22:19.22:19,0,28	1/1:13,0:13:2.27:12,2,0	0/0:14,0:14:38.95:0,39,414	0/1:26,0:25:49.95:172,0,50	0/1:17,0:17:76.57:94,0,77	0/0:8,0:8:2.87:0,3,148	0/1:5,0:5:9.53:36,0,10	0/1:45,0:40:4.36:57,0,4	./.	0/0:5,0:5:0.47:0,0,1	0/1:30,0:30:0.01:0,0,0	0/1:2,7:9:0:0,0,0	0/1:14,0:14:68.04:96,0,68	1/1:9,0:8:3.08:120,3,0	0/1:3,0:3:27.69:28,0,35
chr10	109107722	.	TCTGCCTGCCTGC	T	769.92	PASS	AB=0.744;AC=9;AF=0.173;AN=52;BaseQRankSum=1.774;DP=395;FS=8.321;HRun=0;HaplotypeScore=116.0068;InbreedingCoeff=0.3568;MQ=41.58;MQ0=7;MQRankSum=-5.028;QD=5.70;ReadPosRankSum=3.165;VQSLOD=1.7075;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:11:18.06:0,18,327	0/0:3,0:3:5.97:0,6,46	0/1:31,0:8:7.44:7,0,40	0/0:31,0:7:8.82:0,9,426	./.	0/0:7,0:7:3.01:0,3,58	0/0:22,0:21:29.57:0,30,291	0/0:9,0:9:12.03:0,12,182	0/1:12,0:12:29.82:30,0,101	0/0:11,0:11:17.09:0,17,697	0/0:5,0:4:9.03:0,9,480	1/1:4,9:12:1.29:141,1,0	1/1:4,10:14:18.06:537,18,0	0/1:6,16:22:2.76:92,0,3	0/1:3,11:14:0.54:89,0,1	0/0:14,0:14:36.59:0,37,1642	0/0:8,0:25:30.10:0,30,581	0/0:6,0:18:15.05:0,15,222	0/0:7,0:8:12.03:0,12,207	0/0:2,0:4:6.02:0,6,103	0/0:20,0:31:9.03:0,9,159	./.	0/0:3,1:4:1.25:0,1,3	0/1:7,21:29:0:0,0,0	0/0:9,0:9:2.04:0,2,6	0/0:8,0:14:19.61:0,20,371	0/0:2,0:9:21.01:0,21,274	0/0:3,0:3:6.02:0,6,79
chr10	109109124	.	CA	C	2615.23	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.423;DP=657;FS=2.482;HRun=6;HaplotypeScore=67.6366;InbreedingCoeff=0.9978;MQ=75.03;MQ0=2;MQRankSum=-1.743;QD=25.39;ReadPosRankSum=3.326;VQSLOD=3.8865;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,1616	0/0:9,0:9:21.06:0,21,262	0/0:23,0:18:20.72:0,21,397	0/0:26,1:25:55.26:0,55,635	1/1:2,30:32:87.16:921,87,0	1/1:0,24:24:63.16:677,63,0	1/1:2,13:15:30.07:322,30,0	0/0:40,0:40:99:0,114,1395	1/1:0,17:17:39.10:419,39,0	0/0:22,0:22:63.20:0,63,828	0/0:21,0:21:57.17:0,57,734	0/0:19,0:19:51.15:0,51,656	0/0:20,0:20:57.16:0,57,721	0/0:27,0:27:78.03:0,78,983	0/0:19,0:19:51.15:0,51,652	0/0:21,0:21:54.17:0,54,696	0/0:38,0:38:99:0,102,1268	0/0:26,0:26:75.20:0,75,963	0/0:13,0:13:36.08:0,36,420	0/0:22,0:22:60.19:0,60,785	0/0:19,0:19:45.15:0,45,591	0/0:25,0:25:72.21:0,72,921	0/0:34,0:34:93.25:0,93,1164	0/0:24,0:24:72.17:0,72,900	1/1:0,15:15:42.11:451,42,0	0/0:26,0:26:75.24:0,75,973	0/0:24,0:24:63.15:0,63,793	0/0:11,0:11:33.11:0,33,433
chr10	109109233	.	C	CAAAAAA	4640.80	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=3.569;DP=651;FS=1.398;HRun=9;HaplotypeScore=150.4210;InbreedingCoeff=0.9887;MQ=71.33;MQ0=8;MQRankSum=-8.836;QD=42.97;ReadPosRankSum=-3.744;VQSLOD=1.3367;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:77.12:0,77,1199	0/0:10,0:10:24.01:0,24,445	0/0:34,0:20:24.22:0,24,245	0/0:31,0:19:15.76:0,16,299	1/1:25,2:29:71.84:1105,72,0	1/1:12,4:16:39.13:794,39,0	1/1:12,2:16:39.08:706,39,0	0/0:30,0:30:68.19:0,68,1010	1/1:16,3:20:48.13:911,48,0	0/0:25,0:24:57.06:0,57,939	0/0:17,0:17:35.98:0,36,629	0/0:20,0:20:47.96:0,48,789	0/0:20,0:20:57.17:0,57,1013	0/0:30,0:30:75.09:0,75,1294	0/0:15,0:15:41.83:0,42,644	0/0:29,0:29:78.22:0,78,1318	0/0:34,0:34:90.17:0,90,1505	0/0:28,0:28:47.16:0,47,1103	0/0:17,0:17:47.67:0,48,766	0/0:26,0:27:75.19:0,75,1253	0/0:17,0:17:39.08:0,39,716	0/0:25,0:25:63.05:0,63,959	0/0:18,0:18:32.94:0,33,564	0/0:22,0:22:60.12:0,60,1051	1/1:19,5:24:59.22:1124,59,0	0/0:31,0:31:72.08:0,72,1114	0/0:27,0:27:60.07:0,60,1008	0/0:5,0:5:12.04:0,12,204
chr10	109109283	.	AAAC	A	12647.99	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=10.412;DP=591;FS=0.000;HRun=0;HaplotypeScore=93.9044;InbreedingCoeff=0.9469;MQ=63.55;MQ0=1;MQRankSum=-1.466;QD=27.08;ReadPosRankSum=3.319;VQSLOD=5.0026;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,24:32:60.20:855,60,0	0/0:11,0:11:30.10:0,30,584	0/0:34,1:22:21.07:0,21,378	0/0:21,0:17:18.06:0,18,267	1/1:8,7:15:24.08:333,24,0	1/1:3,13:16:30.10:424,30,0	1/1:5,15:20:33.11:470,33,0	1/1:16,16:32:48.12:620,48,0	1/1:4,17:21:33.11:470,33,0	0/0:17,0:17:42.14:0,42,835	0/0:11,0:11:27.09:0,27,516	1/1:6,14:20:39.13:553,39,0	1/1:3,16:19:42.14:599,42,0	1/1:4,21:25:54.18:770,54,0	1/1:0,15:15:42.14:599,42,0	0/0:28,0:28:66.21:0,66,1277	1/1:5,37:42:81.27:1154,81,0	1/1:3,24:27:54.17:755,54,0	1/1:4,12:16:1.89:412,2,0	1/1:6,11:17:31.75:437,32,0	1/1:6,20:26:20.57:693,21,0	1/1:4,11:15:30.10:416,30,0	1/1:6,12:18:23.68:342,24,0	1/1:1,25:26:63.21:898,63,0	1/1:4,8:12:18.06:256,18,0	1/1:2,23:25:68.80:950,69,0	1/1:7,13:20:32.90:470,33,0	1/1:2,6:8:12.04:171,12,0
chr10	109110827	.	T	TA	27579.51	PASS	AB=0.909;AC=45;AF=0.804;AN=56;BaseQRankSum=12.456;DP=775;FS=5.884;HRun=0;HaplotypeScore=112.4828;InbreedingCoeff=0.8877;MQ=85.48;MQ0=0;MQRankSum=-7.215;QD=43.43;ReadPosRankSum=3.487;VQSLOD=4.3814;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,47:49:99:1966,123,0	0/1:9,1:10:20.88:21,0,309	0/0:22,0:22:60.17:0,60,801	0/0:30,0:29:81.27:0,81,1116	1/1:2,26:28:66.23:1055,66,0	1/1:1,21:22:60.20:959,60,0	1/1:2,24:26:72.25:1150,72,0	1/1:2,34:36:99:1670,108,0	1/1:2,25:27:78.27:1244,78,0	0/0:31,0:31:90.30:0,90,1259	0/0:16,0:16:48.16:0,48,667	1/1:0,35:36:99:1611,102,0	1/1:3,29:32:84.29:1343,84,0	1/1:0,26:26:72.25:1150,72,0	1/1:0,33:33:93.32:1487,93,0	0/0:41,0:40:99:0,117,1612	1/1:0,18:18:54.18:863,54,0	1/1:0,25:25:69.24:1103,69,0	1/1:1,27:28:78.27:1241,78,0	1/1:0,22:22:63.21:1007,63,0	1/1:2,39:41:99:1823,114,0	1/1:1,18:19:54.18:863,54,0	1/1:0,19:19:50.94:815,51,0	1/1:0,36:37:99:1678,105,0	1/1:0,26:26:72.25:1151,72,0	1/1:2,36:37:99:1804,114,0	1/1:2,23:26:69.24:1098,69,0	1/1:0,11:11:30.10:480,30,0
chr10	109113275	.	GT	G	17155.58	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=13.540;DP=790;FS=0.840;HRun=1;HaplotypeScore=78.9989;InbreedingCoeff=0.9994;MQ=85.45;MQ0=0;MQRankSum=-2.350;QD=37.79;ReadPosRankSum=2.315;VQSLOD=5.5046;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,46:46:99:1720,123,0	0/0:12,0:12:30.07:0,30,454	0/0:27,0:27:53.14:0,53,1016	0/0:22,0:22:40.48:0,40,813	1/1:0,29:29:74.26:1026,74,0	1/1:0,30:30:78.26:1090,78,0	1/1:0,23:23:60.20:839,60,0	1/1:0,26:26:78.26:1091,78,0	1/1:0,31:31:87.29:1217,87,0	0/0:41,0:41:99:0,120,1896	0/0:17,0:17:51.16:0,51,792	0/0:33,0:33:99:0,99,1583	0/0:39,0:39:99:0,117,1818	0/0:33,0:33:96.32:0,96,1513	1/1:0,30:30:81.27:1133,81,0	0/0:33,0:33:99:0,99,1583	1/1:0,34:34:96.32:1342,96,0	1/1:0,28:28:78.26:1091,78,0	1/1:1,19:20:60.13:773,60,0	1/1:0,22:22:57.19:797,57,0	1/1:0,45:45:99:1553,111,0	0/0:26,0:26:78.25:0,78,1224	0/0:18,0:18:54.18:0,54,858	0/0:35,0:35:99:0,105,1627	1/1:0,34:34:90.30:1259,90,0	1/1:0,29:29:87.29:1217,87,0	1/1:0,20:20:51.17:713,51,0	1/1:0,7:7:21.07:294,21,0
chr10	109115543	.	G	GA	25487.79	PASS	AB=0.519;AC=43;AF=0.768;AN=56;BaseQRankSum=-10.978;DP=715;FS=5.152;HRun=2;HaplotypeScore=71.4807;InbreedingCoeff=0.9353;MQ=92.46;MQ0=0;MQRankSum=-8.058;QD=42.76;ReadPosRankSum=5.219;VQSLOD=4.2931;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:0,46:46:99:2062,129,0	0/0:12,0:12:36.11:0,36,488	0/0:27,0:27:78.23:0,78,1033	0/0:32,0:32:90.22:0,90,1172	1/1:0,25:25:60.20:958,60,0	1/1:0,20:20:60.20:959,60,0	1/1:1,24:25:66.22:1055,66,0	1/1:1,28:29:84.27:1291,84,0	1/1:0,21:21:57.19:911,57,0	0/0:15,0:15:45.14:0,45,605	0/0:14,0:14:39.13:0,39,538	1/1:1,33:34:90.31:1439,90,0	1/1:0,15:15:36.12:576,36,0	1/1:0,33:33:93.32:1486,93,0	1/1:1,25:26:69.24:1103,69,0	0/0:19,0:18:57.19:0,57,782	1/1:0,38:38:90.31:1439,90,0	1/1:0,32:32:96.33:1535,96,0	1/1:0,24:24:72.24:1141,72,0	1/1:0,14:14:42.14:672,42,0	1/1:1,37:38:99:1631,102,0	1/1:2,21:23:51.17:815,51,0	1/1:0,18:18:38.98:623,39,0	1/1:1,31:32:84.29:1343,84,0	1/1:0,22:22:63.21:1007,63,0	0/1:2,25:27:2.35:1091,0,2	1/1:2,32:34:87.30:1391,87,0	1/1:0,20:20:60.20:959,60,0
chr10	109116198	.	AGTGT	A	6394.26	PASS	AB=0.630;AC=23;AF=0.411;AN=56;BaseQRankSum=-1.024;DP=696;FS=6.562;HRun=0;HaplotypeScore=120.5622;InbreedingCoeff=0.8689;MQ=61.21;MQ0=15;MQRankSum=-0.236;QD=22.36;ReadPosRankSum=4.214;VQSLOD=4.3634;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:36:38.16:0,38,637	0/0:3,0:4:8.77:0,9,159	0/0:49,0:19:17.99:0,18,246	0/0:42,0:15:18.94:0,19,315	1/1:9,13:22:21.07:337,21,0	1/1:2,21:24:31.05:635,31,0	0/1:7,10:17:26.69:276,0,27	0/0:16,0:26:36.05:0,36,497	1/1:6,17:23:36.12:573,36,0	0/0:19,0:20:47.89:0,48,901	0/0:13,0:15:14.79:0,15,281	1/1:13,21:34:57.10:887,57,0	1/1:10,20:30:51.17:818,51,0	1/1:8,20:28:41.89:693,42,0	1/1:7,18:25:33.11:545,33,0	0/0:35,0:37:84.01:0,84,1868	0/0:4,0:20:26.12:0,26,427	0/0:8,0:24:33.11:0,33,549	0/0:16,0:17:18.06:0,18,271	0/0:6,0:15:24.04:0,24,353	0/0:18,0:35:3.01:0,3,52	1/1:8,13:21:30.10:487,30,0	1/1:6,9:16:5.45:235,5,0	1/1:4,20:25:33.04:513,33,0	1/1:7,12:18:24.08:396,24,0	0/0:17,0:30:42.07:0,42,609	0/0:4,0:18:33.11:0,33,573	0/0:9,0:18:18.06:0,18,269
chr10	109116277	.	C	CT	1830.80	PASS	AB=0.898;AC=20;AF=0.357;AN=56;BaseQRankSum=14.724;DP=566;FS=125.658;HRun=0;HaplotypeScore=199.3690;InbreedingCoeff=-0.5629;MQ=53.90;MQ0=4;MQRankSum=-10.490;QD=4.58;ReadPosRankSum=-3.222;VQSLOD=0.6382;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,1:20:40.17:40,0,292	0/1:10,1:11:47.57:48,0,224	0/0:16,0:10:12.40:0,12,324	0/0:27,0:22:63.14:0,63,821	0/1:15,7:21:99:142,0,245	0/1:11,4:15:99:228,0,148	0/1:18,1:17:34.14:34,0,386	0/0:27,0:26:11.97:0,12,747	0/1:22,0:21:99:140,0,123	0/1:14,2:16:99:164,0,212	0/1:13,3:15:66.65:67,0,193	0/1:27,1:28:16.95:17,0,692	0/1:32,1:32:22.85:23,0,799	0/1:29,1:30:61.19:61,0,776	0/1:20,1:21:6.45:6,0,479	0/0:27,0:27:0.24:0,0,671	0/0:9,0:9:13.20:0,13,212	0/1:6,1:7:33.08:33,0,152	0/1:12,0:12:4.26:4,0,252	0/1:15,3:18:99:126,0,214	0/0:18,0:16:27.09:0,27,377	0/1:18,3:21:99:146,0,191	0/1:13,6:19:93.15:93,0,257	0/0:18,0:17:18.85:0,19,404	0/1:27,5:32:99:286,0,355	0/1:26,2:28:99:146,0,574	0/0:24,0:24:19.33:0,19,640	0/1:8,2:10:20.99:181,0,21
chr10	109116284	.	C	CT	1044.55	PASS	AB=0.912;AC=17;AF=0.304;AN=56;BaseQRankSum=12.613;DP=555;FS=67.535;HRun=0;HaplotypeScore=199.2168;InbreedingCoeff=-0.4479;MQ=44.07;MQ0=5;MQRankSum=-8.970;QD=2.95;ReadPosRankSum=-0.839;VQSLOD=0.6335;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,1:14:16.53:0,17,349	0/1:9,2:11:70.54:71,0,217	0/0:14,0:8:8.57:0,9,217	0/0:19,0:15:29.60:0,30,479	0/1:18,4:21:56.85:57,0,177	0/1:13,1:14:64.88:123,0,65	0/0:15,2:15:5.79:0,6,266	0/1:27,0:27:12.80:13,0,686	0/1:14,7:19:40.92:41,0,173	0/1:21,1:22:99:182,0,153	0/1:14,3:16:52.65:53,0,150	0/1:29,0:30:25.83:26,0,683	0/0:31,0:30:43.52:0,44,776	0/0:31,0:30:24.64:0,25,774	0/0:21,0:21:34.84:0,35,472	0/1:23,4:27:21.83:22,0,642	0/0:9,0:9:13.58:0,14,136	0/0:7,0:7:14.96:0,15,184	0/1:10,1:11:28.46:28,0,225	0/1:16,2:18:99:100,0,217	0/0:18,0:16:27.09:0,27,377	0/1:20,1:21:85.81:86,0,229	0/1:19,1:20:77.72:78,0,208	0/0:20,0:19:23.76:0,24,370	0/1:27,5:32:99:199,0,188	0/1:27,1:28:27.39:27,0,583	0/1:22,1:22:12.77:13,0,543	0/1:9,0:9:59.71:86,0,60
chr10	109116290	.	C	CCT	3695.09	PASS	AB=0.980;AC=27;AF=0.482;AN=56;BaseQRankSum=14.518;DP=543;FS=79.797;HRun=0;HaplotypeScore=196.0445;InbreedingCoeff=-0.5118;MQ=40.97;MQ0=5;MQRankSum=-7.406;QD=7.71;ReadPosRankSum=1.766;VQSLOD=0.4426;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:18.25:18,0,387	0/1:11,0:11:70.13:70,0,203	0/0:12,0:6:14.39:0,14,155	0/0:15,0:11:21.55:0,22,241	1/1:22,0:21:32.59:215,33,0	1/1:13,0:14:35.58:389,36,0	0/1:14,0:12:54.83:186,0,55	0/1:30,0:28:99:150,0,581	0/1:21,0:19:44.04:258,0,44	0/1:25,0:25:87.47:310,0,87	0/1:16,0:15:90.29:129,0,90	0/1:30,0:30:99:150,0,709	0/1:30,0:29:62.49:62,0,735	0/1:29,0:29:9.47:9,0,720	0/1:20,0:21:31.48:31,0,428	0/1:26,0:26:99:109,0,629	0/1:8,0:8:21.28:21,0,116	0/1:7,0:7:23.94:24,0,168	0/1:9,2:11:99:228,0,133	0/1:17,0:18:99:153,0,168	0/0:18,0:16:24.04:0,24,341	0/1:19,1:20:99:184,0,260	0/1:18,1:20:99:139,0,175	0/0:19,0:18:5.34:0,5,377	1/1:32,0:32:26.72:424,27,0	0/1:31,0:31:99:192,0,608	0/1:22,0:21:83.85:84,0,487	0/1:7,0:7:28.06:158,0,28
chr10	109116291	.	C	CTT	2512.62	PASS	AB=0.847;AC=24;AF=0.429;AN=56;BaseQRankSum=11.737;DP=531;FS=39.664;HRun=0;HaplotypeScore=196.9604;InbreedingCoeff=-0.4706;MQ=40.39;MQ0=5;MQRankSum=-6.427;QD=5.70;ReadPosRankSum=1.039;VQSLOD=1.4563;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,1:13:26.77:27,0,431	0/1:8,1:11:99:107,0,203	0/0:11,0:5:12.03:0,12,160	0/0:14,0:10:11.35:0,11,180	1/1:10,7:20:19.51:199,20,0	1/1:9,4:14:27.14:335,27,0	0/1:12,0:12:78.49:96,0,78	0/1:26,2:27:99:137,0,657	0/1:13,0:18:46.84:47,0,121	0/1:22,2:25:99:183,0,120	0/1:9,3:14:92.72:133,0,93	0/1:27,1:28:96.68:97,0,770	0/1:28,1:28:30.57:31,0,815	0/1:27,2:29:26.43:26,0,777	0/0:20,0:21:22:0,22,531	0/1:20,1:26:77.54:78,0,662	0/0:8,0:8:12.31:0,12,152	0/1:6,1:7:45.91:46,0,180	0/1:9,0:10:81.96:82,0,146	0/1:14,3:18:99:155,0,179	0/0:17,0:15:24.04:0,24,360	0/1:14,3:20:99:142,0,298	0/1:13,4:20:99:142,0,161	0/0:18,0:18:24.05:0,24,430	0/1:18,5:31:55.83:263,0,56	0/1:28,2:31:99:138,0,677	0/1:19,2:21:83.45:83,0,496	0/1:5,2:7:51.52:136,0,52
chr10	109116305	.	T	TCTC	2917.21	PASS	AB=0.928;AC=22;AF=0.393;AN=56;BaseQRankSum=10.918;DP=452;FS=45.639;HRun=0;HaplotypeScore=188.8417;InbreedingCoeff=-0.4267;MQ=33.75;MQ0=3;MQRankSum=-4.062;QD=8.15;ReadPosRankSum=0.676;VQSLOD=1.1568;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,1:13:57.50:57,0,93	0/1:8,0:9:61.94:147,0,62	0/0:5,0:1:3.01:0,3,39	0/0:4,0:2:2.74:0,3,48	0/1:14,5:18:20.49:93,0,20	1/1:13,1:14:6.24:322,6,0	0/1:10,0:11:57.37:57,0,58	0/1:24,0:22:81.79:82,0,252	0/1:19,0:17:77.26:269,0,77	0/1:23,0:23:99:227,0,113	0/1:12,2:14:18.23:139,0,18	0/1:25,1:26:51.89:52,0,462	0/0:25,1:26:8.09:0,8,394	0/1:26,0:25:0.13:0,0,365	0/0:18,0:18:11.10:0,11,217	0/1:21,1:22:99:307,0,298	0/0:6,0:7:11.99:0,12,120	0/1:5,1:6:53.52:54,0,91	0/0:9,0:9:0.55:0,1,67	0/1:14,0:15:50.89:92,0,51	0/0:10,0:10:5.99:0,6,57	0/1:15,2:17:87.60:113,0,88	0/1:16,3:19:46.48:152,0,46	0/0:15,0:14:11.73:0,12,128	1/1:27,2:29:26.16:387,26,0	0/1:26,0:26:97.13:97,0,340	0/1:18,0:17:99:135,0,160	0/1:6,1:7:18.59:291,0,19
chr10	109116306	.	C	CTCT	1919.28	PASS	AB=0.939;AC=21;AF=0.375;AN=56;BaseQRankSum=10.536;DP=432;FS=50.127;HRun=0;HaplotypeScore=199.6768;InbreedingCoeff=-0.3654;MQ=33.69;MQ0=3;MQRankSum=-4.447;QD=6.09;ReadPosRankSum=2.067;VQSLOD=1.0345;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,1:13:38.38:38,0,82	0/1:6,2:8:99:141,0,102	0/0:4,0:1:3.01:0,3,34	0/0:4,0:2:2.88:0,3,46	1/1:17,0:16:8.21:60,8,0	0/1:12,0:12:4.31:122,0,4	0/1:11,0:11:27.86:28,0,68	0/1:21,2:21:74.75:75,0,389	0/1:19,0:17:93.48:147,0,93	0/1:19,1:20:99:150,0,176	0/1:10,3:13:33.46:102,0,33	0/1:26,0:26:38.06:38,0,493	0/0:26,0:26:24.46:0,24,451	0/0:25,0:24:8.08:0,8,460	0/0:18,0:18:10.10:0,10,274	0/1:17,5:22:99:294,0,400	0/0:7,0:7:1.64:0,2,50	0/1:6,0:6:31.75:32,0,130	0/0:9,0:9:15.64:0,16,105	0/1:13,1:14:18.57:141,0,19	0/0:9,0:9:5.97:0,6,45	0/1:14,1:15:63.39:63,0,124	0/1:18,1:19:69.27:69,0,76	0/0:14,0:13:12:0,12,151	1/1:28,0:28:23.17:247,23,0	0/1:23,1:24:64.47:64,0,520	0/1:17,1:17:81.18:81,0,266	0/1:7,0:7:26.63:188,0,27
chr10	109117513	.	T	TATA	7750.47	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-12.343;DP=780;FS=3.320;HRun=0;HaplotypeScore=104.3895;InbreedingCoeff=0.9991;MQ=85.01;MQ0=0;MQRankSum=-3.614;QD=59.62;ReadPosRankSum=1.642;VQSLOD=6.8873;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,2333	0/0:16,0:16:48.16:0,48,893	0/0:22,0:22:58.66:0,59,923	0/0:33,0:33:93.28:0,93,1609	1/1:0,22:23:48.16:1178,48,0	1/1:1,21:22:60.14:1415,60,0	1/1:1,34:37:99:2425,99,0	0/0:35,0:35:99:0,102,1756	1/1:1,24:28:63.22:1545,63,0	0/0:30,0:30:90.31:0,90,1670	0/0:17,0:17:51.03:0,51,837	0/0:31,0:31:87.29:0,87,1575	0/0:34,0:34:99:0,102,1802	0/0:24,0:24:72.23:0,72,1269	0/0:45,0:45:99:0,135,2474	0/0:30,0:30:90.29:0,90,1612	0/0:31,0:31:93.29:0,93,1663	0/0:23,0:23:69.20:0,69,1212	0/0:19,0:19:57.18:0,57,1006	0/0:37,0:37:99:0,111,1990	0/0:30,0:30:90.31:0,90,1670	0/0:26,0:26:78.13:0,78,1311	0/0:29,0:29:84.29:0,84,1555	0/0:31,0:31:87.28:0,87,1545	1/1:0,20:20:51.17:1186,51,0	0/0:26,0:26:78.23:0,78,1388	0/0:31,0:31:93.32:0,93,1716	0/0:8,0:8:21.07:0,21,391
chr10	109119295	.	T	TG	7798.37	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-14.691;DP=739;FS=0.000;HRun=1;HaplotypeScore=74.1490;InbreedingCoeff=0.9897;MQ=75.65;MQ0=0;MQRankSum=0.439;QD=39.39;ReadPosRankSum=4.557;VQSLOD=5.2947;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:65:99:0,196,2497	0/0:9,0:9:27.09:0,27,350	0/0:11,0:11:28.40:0,28,271	0/0:18,0:18:10.03:0,10,275	0/0:22,0:22:63.16:0,63,773	0/0:24,0:24:72.23:0,72,923	0/0:45,0:45:99:0,135,1724	0/0:27,0:27:78.24:0,78,998	0/0:24,0:24:72.20:0,72,905	0/0:29,0:29:87.25:0,87,1077	0/0:16,0:16:45.07:0,45,548	1/1:3,28:31:81.27:1197,81,0	1/1:1,23:24:66.22:982,66,0	1/1:1,36:37:96.33:1439,96,0	1/1:1,40:41:99:1573,105,0	0/0:28,0:28:81.25:0,81,1037	0/0:30,0:30:87.21:0,87,1068	0/0:22,0:22:66.19:0,66,839	0/0:21,0:21:63.20:0,63,817	0/0:24,0:24:72.22:0,72,916	0/0:50,0:50:99:0,132,1713	1/1:0,20:20:57.19:854,57,0	1/1:0,18:18:51.17:764,51,0	1/1:2,25:27:66.22:989,66,0	0/0:14,0:14:42.14:0,42,545	0/0:32,0:32:90.27:0,90,1129	0/0:24,0:24:72.18:0,72,877	0/0:6,0:6:18.06:0,18,233
chr10	109120244	.	CTTCATCCTGTT	C	11070.83	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=15.784;DP=837;FS=0.797;HRun=0;HaplotypeScore=269.3471;InbreedingCoeff=0.9999;MQ=79.53;MQ0=0;MQRankSum=-16.131;QD=85.16;ReadPosRankSum=1.093;VQSLOD=4.0131;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,154,8046	0/0:16,0:16:48.16:0,48,2488	0/0:36,0:36:99:0,105,5163	0/0:32,0:32:90.31:0,90,4595	1/1:2,28:30:65.47:2357,65,0	1/1:1,26:27:72.25:2608,72,0	1/1:5,14:19:30.10:1087,30,0	0/0:35,0:36:99:0,102,5580	1/1:2,30:32:78.24:2740,78,0	0/0:35,0:35:99:0,102,5810	0/0:18,0:18:54.18:0,54,2794	0/0:45,0:45:99:0,135,7190	0/0:31,0:31:90.30:0,90,4772	0/0:35,0:35:96.32:0,96,5162	0/0:26,0:26:78.27:0,78,4032	0/0:23,0:23:69.24:0,69,3896	0/0:24,0:24:72.18:0,72,3370	0/0:34,0:34:99:0,102,5518	0/0:25,0:25:72.25:0,72,3816	0/0:19,0:19:57.19:0,57,3118	0/0:28,0:28:84.26:0,84,4521	0/0:33,0:33:99:0,99,5446	0/0:27,0:27:81.28:0,81,4292	0/0:26,0:26:78.27:0,78,4249	1/1:1,21:22:63.22:2279,63,0	0/0:42,0:42:99:0,123,6832	0/0:41,0:41:99:0,123,6236	0/0:23,0:23:69.24:0,69,3877
chr10	109120740	.	AT	A	4723.75	PASS	AB=0.944;AC=31;AF=0.554;AN=56;BaseQRankSum=7.052;DP=513;FS=7.786;HRun=13;HaplotypeScore=55.3330;InbreedingCoeff=0.8876;MQ=71.30;MQ0=6;MQRankSum=-1.547;QD=13.65;ReadPosRankSum=1.323;VQSLOD=5.1653;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,28:38:71.63:495,72,0	0/0:5,0:5:6.01:0,6,58	0/0:19,0:12:20.35:0,20,162	0/0:10,0:9:5.92:0,6,41	1/1:6,16:23:17.54:269,18,0	1/1:3,19:22:53.67:394,54,0	1/1:3,16:20:37.75:263,38,0	1/1:6,25:31:48.11:501,48,0	1/1:3,8:11:17.89:131,18,0	0/0:15,3:18:11.49:0,11,287	0/0:20,0:22:47.72:0,48,422	0/0:15,1:15:23.16:0,23,386	0/0:15,0:15:36.05:0,36,346	0/0:19,1:21:26:0,26,395	0/1:16,1:17:1.86:2,0,289	0/0:11,1:12:5.13:0,5,212	1/1:4,20:23:53.68:394,54,0	1/1:7,9:16:23.75:170,24,0	1/1:6,14:19:42.73:290,43,0	1/1:2,14:16:35.58:252,36,0	1/1:1,6:7:14.91:109,15,0	0/0:7,0:8:11.86:0,12,102	0/0:11,0:13:23.07:0,23,267	0/0:8,0:8:10.26:0,10,91	1/1:3,31:34:69.63:558,70,0	1/1:6,13:19:37.77:267,38,0	1/1:4,20:24:46.77:334,47,0	1/1:3,15:18:27.60:293,28,0
chr10	109121197	.	A	ACG	5397.86	PASS	AB=0.992;AC=33;AF=0.589;AN=56;BaseQRankSum=9.409;DP=511;FS=14.408;HRun=0;HaplotypeScore=95.5864;InbreedingCoeff=0.5705;MQ=58.66;MQ0=3;MQRankSum=1.431;QD=14.36;ReadPosRankSum=-1.011;VQSLOD=3.1588;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:39.16:594,39,0	0/0:17,0:17:45.05:0,45,512	0/0:9,0:5:1.63:0,2,38	0/0:9,0:2:3.01:0,3,31	1/1:15,0:14:9.03:107,9,0	1/1:10,1:11:14.80:156,15,0	0/1:23,1:24:6.81:184,0,7	1/1:15,0:15:26.05:243,26,0	1/1:12,0:12:12.04:141,12,0	0/0:24,0:24:57.06:0,57,690	0/0:16,0:16:33.06:0,33,388	0/0:20,0:20:21.31:0,21,238	0/0:14,0:14:8.59:0,9,90	0/0:13,0:13:31.24:0,31,162	0/1:10,0:10:49.02:49,0,49	0/0:13,0:13:30.08:0,30,381	1/1:33,0:33:31.52:585,32,0	1/1:27,0:27:51.16:607,51,0	1/1:19,1:20:26.10:482,26,0	1/1:12,0:12:9.03:106,9,0	1/1:35,0:35:60.19:737,60,0	0/1:25,0:25:2.89:3,0,225	0/1:10,0:10:25.48:25,0,40	0/1:19,0:19:26.94:27,0,115	1/1:15,1:16:9.03:122,9,0	1/1:20,0:20:56.55:587,57,0	1/1:14,0:13:17.82:219,18,0	1/1:22,1:23:36.03:424,36,0
chr10	109121203	.	G	GCGCA	11883.13	PASS	AB=0.887;AC=32;AF=0.571;AN=56;BaseQRankSum=-11.386;DP=546;FS=14.617;HRun=0;HaplotypeScore=93.5057;InbreedingCoeff=0.6312;MQ=58.35;MQ0=7;MQRankSum=1.199;QD=30.31;ReadPosRankSum=-0.028;VQSLOD=3.3548;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:36:9.44:1269,9,0	0/0:16,0:16:47.99:0,48,775	0/0:12,0:6:7.56:0,8,108	0/0:11,0:5:5.95:0,6,60	1/1:4,14:17:9.03:250,9,0	1/1:2,10:13:14.84:347,15,0	0/1:4,16:23:6.55:243,0,7	1/1:4,14:20:51:769,51,0	1/1:3,12:15:12.04:332,12,0	0/0:22,0:23:60.09:0,60,1012	0/0:12,0:13:33.08:0,33,560	0/0:18,0:18:26.04:0,26,462	0/0:11,0:12:9.91:0,10,180	0/0:14,0:14:36.01:0,36,330	0/1:8,0:9:42.57:43,0,122	0/0:10,0:11:33.07:0,33,594	1/1:2,29:36:12.57:1422,13,0	1/1:2,28:30:51.18:1418,51,0	1/1:2,16:22:37.96:994,38,0	1/1:2,10:12:9.03:249,9,0	1/1:4,32:43:42.05:1496,42,0	0/0:24,0:24:5.86:0,6,491	0/1:8,0:8:24.90:25,0,92	0/1:18,0:19:15.05:15,0,323	1/1:2,13:17:8.66:181,9,0	1/1:3,22:30:72.11:1579,72,0	1/1:1,14:15:17.03:423,17,0	1/1:2,19:22:31.61:829,32,0
chr10	109123238	.	T	TTCTG	4464.28	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-9.533;DP=563;FS=0.000;HRun=0;HaplotypeScore=106.1760;InbreedingCoeff=0.9606;MQ=59.53;MQ0=1;MQRankSum=-0.403;QD=37.83;ReadPosRankSum=2.752;VQSLOD=4.5941;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:60.35:0,60,1242	0/0:13,0:13:27.08:0,27,417	0/0:7,0:6:9.26:0,9,135	0/0:6,0:5:5.60:0,6,98	0/0:19,0:19:39.07:0,39,560	0/0:20,0:20:45.14:0,45,675	0/0:9,0:8:21.07:0,21,332	0/0:39,0:39:78.21:0,78,1111	0/0:21,0:21:45.10:0,45,635	0/0:25,0:25:39.13:0,39,613	0/0:25,0:25:54.18:0,54,855	1/1:2,18:23:44.94:1092,45,0	1/1:4,10:17:12.04:291,12,0	1/1:2,12:15:27.09:655,27,0	1/1:3,16:19:24.08:583,24,0	0/0:19,0:19:42.14:0,42,684	0/0:26,0:26:57.19:0,57,917	0/0:21,0:21:51.14:0,51,765	0/0:29,0:29:51.15:0,51,762	0/0:25,0:25:63.17:0,63,945	0/0:21,0:21:35.85:0,36,560	1/1:4,13:17:26.81:539,27,0	1/1:3,12:15:36.12:867,36,0	1/1:6,6:12:18.06:437,18,0	0/0:18,0:18:36.11:0,36,537	0/0:28,0:29:78.26:0,78,1253	0/0:23,0:23:54.18:0,54,851	0/0:11,0:11:24.05:0,24,362
chr10	109126062	.	AG	A	8094.99	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.315;DP=874;FS=2.405;HRun=2;HaplotypeScore=84.5825;InbreedingCoeff=1.0000;MQ=83.01;MQ0=0;MQRankSum=-1.855;QD=34.30;ReadPosRankSum=6.035;VQSLOD=4.8395;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,168,2409	0/0:18,0:18:54.18:0,54,806	0/0:24,0:24:72.15:0,72,985	0/0:27,0:27:58.25:0,58,998	0/0:28,0:28:84.23:0,84,1189	0/0:25,0:25:72.22:0,72,1040	0/0:37,0:37:99:0,108,1515	0/0:45,0:45:99:0,123,1806	0/0:38,0:38:99:0,114,1667	0/0:29,0:29:84.23:0,84,1232	0/0:21,0:21:63.19:0,63,903	1/1:1,42:43:99:1558,120,0	1/1:2,26:28:69.22:896,69,0	1/1:1,32:33:87.28:1126,87,0	1/1:0,48:48:99:1713,132,0	0/0:30,0:30:90.28:0,90,1304	0/0:31,0:31:93.29:0,93,1351	0/0:29,0:29:87.26:0,87,1275	0/0:21,0:21:63.19:0,63,888	0/0:31,0:31:93.31:0,93,1387	0/0:53,0:53:99:0,153,2248	1/1:0,25:25:69.22:896,69,0	1/1:0,25:25:63.10:778,63,0	1/1:2,32:34:87.28:1129,87,0	0/0:23,0:23:66.21:0,66,969	0/0:33,0:33:96.33:0,96,1435	0/0:26,0:25:75.25:0,75,1112	0/0:11,0:11:33.11:0,33,492
chr10	109129926	.	CG	C	237.41	PASS	AC=14;AF=0.636;AN=22;BaseQRankSum=-2.192;DP=29;FS=6.021;HRun=1;HaplotypeScore=12.1579;InbreedingCoeff=0.3219;MQ=84.56;MQ0=2;MQRankSum=-2.192;QD=19.78;ReadPosRankSum=-1.485;VQSLOD=2.9600;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:3,0:1:3.01:0,3,30	0/0:6,1:2:1.78:0,2,46	./.	./.	1/1:0,3:2:2.22:7,2,0	1/1:0,1:1:3.01:41,3,0	./.	1/1:0,1:1:3.01:42,3,0	./.	1/1:0,2:2:3.01:36,3,0	1/1:0,2:2:6.02:83,6,0	./.	./.	./.	0/0:2,0:1:1.82:0,2,5	./.	1/1:0,2:2:6.02:75,6,0	./.	0/0:0,1:1:0.89:0,1,2	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:42,3,0	./.
chr10	109134772	.	AGTGT	A	1114.63	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=0.302;DP=915;FS=22.312;HRun=0;HaplotypeScore=213.2280;InbreedingCoeff=0.8769;MQ=65.01;MQ0=27;MQRankSum=-7.107;QD=8.92;ReadPosRankSum=-1.296;VQSLOD=1.5276;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:75.21:0,75,1250	0/0:13,0:16:35.84:0,36,763	./.	0/0:57,0:20:1.04:0,1,200	1/1:9,9:18:5.91:97,6,0	1/1:15,19:35:36.11:584,36,0	1/1:17,17:36:17.40:251,17,0	0/0:29,0:30:50.66:0,51,552	1/1:8,9:17:12.04:195,12,0	0/0:34,0:36:74.81:0,75,1608	0/0:18,0:18:42.14:0,42,1008	0/0:41,0:41:57.54:0,58,964	0/0:25,0:27:38.11:0,38,624	0/0:41,0:41:56.80:0,57,919	0/0:27,0:27:33.06:0,33,564	0/0:34,0:37:68.97:0,69,1566	0/0:43,0:43:75.22:0,75,1234	0/0:28,0:28:41.13:0,41,652	0/0:19,0:19:21.06:0,21,329	0/0:19,0:19:26.12:0,26,424	0/0:70,0:69:51.78:0,52,938	0/0:25,0:25:46.20:0,46,713	0/0:21,0:21:24.03:0,24,434	0/0:48,0:49:60.21:0,60,1040	1/1:9,10:18:8.95:146,9,0	0/0:32,0:32:75.76:0,76,1217	0/0:6,0:6:6.91:0,7,106	0/0:22,0:22:27.09:0,27,457
chr10	109134800	.	T	TGTGC	15698.32	PASS	AB=0.848;AC=38;AF=0.679;AN=56;BaseQRankSum=-10.328;DP=839;FS=3.402;HRun=0;HaplotypeScore=145.9767;InbreedingCoeff=0.4503;MQ=58.28;MQ0=21;MQRankSum=3.602;QD=24.08;ReadPosRankSum=3.898;VQSLOD=4.5504;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,36:47:41.81:1419,42,0	0/0:17,0:17:42.10:0,42,645	0/0:40,0:7:11.14:0,11,128	0/0:41,0:11:4.86:0,5,100	1/1:20,0:20:0.83:109,1,0	0/1:23,0:23:41.03:41,0,90	0/1:33,0:33:24.85:151,0,25	1/1:8,16:29:54.96:545,55,0	0/1:12,0:12:23.53:24,0,26	0/0:34,0:34:88.12:0,88,1329	0/0:18,0:18:48.07:0,48,781	1/1:4,33:41:23.38:1079,23,0	1/1:4,16:22:22.40:629,22,0	1/1:4,34:41:27.35:1083,27,0	1/1:3,20:25:32.29:706,32,0	0/0:33,0:33:87.11:0,87,1333	1/1:2,31:39:65.84:1698,66,0	1/1:2,29:32:40.24:955,40,0	1/1:4,2:13:29.15:415,29,0	1/1:1,17:19:21.02:518,21,0	0/1:11,44:60:14.42:712,0,14	1/1:2,25:27:17.15:899,17,0	1/1:3,24:28:6.26:566,6,0	1/1:1,36:44:60.21:1622,60,0	0/1:15,0:14:6.40:6,0,33	0/1:5,30:37:11.92:1600,0,12	1/1:1,13:14:9.09:177,9,0	1/1:0,27:29:27.09:745,27,0
chr10	109135509	.	CTTT	C	6649.87	PASS	AB=0.758;AC=45;AF=0.804;AN=56;BaseQRankSum=5.617;DP=641;FS=6.402;HRun=18;HaplotypeScore=118.3903;InbreedingCoeff=0.8263;MQ=67.08;MQ0=14;MQRankSum=-5.491;QD=13.74;ReadPosRankSum=3.413;VQSLOD=2.3469;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,16:35:12.59:432,13,0	0/0:9,0:10:18.04:0,18,269	0/0:56,0:19:26.20:0,26,273	0/0:44,0:19:18.83:0,19,207	1/1:8,0:26:42.51:257,43,0	1/1:3,0:26:58.35:347,58,0	1/1:3,1:18:40.84:254,41,0	1/1:11,13:24:35.43:353,35,0	1/1:4,0:12:23.20:138,23,0	0/0:20,0:23:43.34:0,43,602	0/0:20,0:21:50.48:0,50,667	1/1:7,9:16:29.66:266,30,0	1/1:3,15:20:38.59:356,39,0	1/1:8,12:21:35.58:339,36,0	1/1:4,14:21:50.71:456,51,0	0/1:16,2:25:8.31:8,0,564	1/1:6,18:25:53.76:518,54,0	1/1:6,10:17:29.72:272,30,0	1/1:13,9:21:4.53:241,5,0	1/1:13,13:28:31.62:330,32,0	1/1:5,5:10:6.97:84,7,0	1/1:8,10:19:31.94:287,32,0	1/1:7,8:20:31.76:281,32,0	1/1:4,0:16:27.04:166,27,0	1/1:6,0:19:37.78:223,38,0	1/1:7,13:23:5.40:322,5,0	1/1:4,17:25:52.14:477,52,0	1/1:2,6:12:29.58:243,30,0
chr10	109136622	.	GCAGCCTGCCAAGTGAGGACAGA	G	3139.70	PASS	AB=0.864;AC=15;AF=0.288;AN=52;BaseQRankSum=6.552;DP=638;FS=3.984;HRun=0;HaplotypeScore=353.1045;InbreedingCoeff=0.7609;MQ=71.45;MQ0=1;MQRankSum=-4.307;QD=15.17;ReadPosRankSum=1.174;VQSLOD=1.6288;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,7:39:6.02:279,6,0	0/0:10,0:10:18.06:0,18,1447	0/0:18,0:18:6.02:0,6,122	0/0:26,0:26:9.03:0,9,126	0/0:23,0:23:21.07:0,21,1220	0/0:18,0:18:33.11:0,33,2224	0/0:30,0:30:45.14:0,45,2166	1/1:41,0:41:6.02:103,6,0	0/0:21,0:21:30.10:0,30,2692	0/0:21,0:21:27.09:0,27,2022	0/0:19,0:19:12.04:0,12,985	0/0:26,0:26:48.16:0,48,4088	0/0:26,0:26:54.17:0,54,4530	0/0:30,0:30:63.22:0,63,4650	0/0:34,0:34:51.17:0,51,4235	0/0:15,0:15:33.11:0,33,2450	1/1:25,7:32:7.27:378,7,0	1/1:16,4:20:1.25:109,1,0	./.	./.	1/1:29,0:29:11.70:229,12,0	0/0:18,0:18:33.11:0,33,2434	0/0:18,0:18:33.11:0,33,2197	0/0:40,0:39:63.20:0,63,5534	0/0:11,0:11:27.09:0,27,2195	0/1:16,3:19:99:295,0,168	1/1:10,6:16:18.06:887,18,0	1/1:5,6:11:18.06:1034,18,0
chr10	109137737	.	ACGCGCGCGCGCGCGTGCGTGCGTGTGTG	A	2742.92	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=-2.457;DP=494;FS=0.749;HRun=0;HaplotypeScore=347.8960;InbreedingCoeff=0.5185;MQ=59.85;MQ0=0;MQRankSum=-1.256;QD=13.45;ReadPosRankSum=-1.369;VQSLOD=1.1822;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:45,0:45:35.06:35,0,571	0/0:7,0:7:15.05:0,15,987	0/1:8,0:7:0:0,0,0	0/0:8,0:8:6.02:0,6,126	1/1:3,8:11:6.49:352,6,0	1/1:5,0:5:6.01:97,6,0	1/1:26,0:26:30.04:638,30,0	0/1:16,0:16:17.96:18,0,101	1/1:9,19:28:21.07:1358,21,0	0/0:25,0:25:63.17:0,63,4656	0/0:13,0:13:30.02:0,30,2937	0/0:18,0:18:9.03:0,9,308	0/0:19,0:19:9.03:0,9,345	0/0:22,0:22:18.06:0,18,687	0/0:17,0:17:15.05:0,15,591	0/0:15,0:16:30.10:0,30,3055	0/1:31,0:31:20.54:21,0,384	0/0:26,0:26:16:0,16,622	0/0:14,0:14:14.88:0,15,260	0/0:11,0:11:9.03:0,9,179	1/1:26,0:26:3.94:28,4,0	0/0:22,0:21:8.96:0,9,355	0/0:14,0:14:2.81:0,3,110	0/0:15,0:16:13.81:0,14,476	1/1:3,5:8:6.02:365,6,0	0/0:26,0:26:39.05:0,39,924	0/0:11,0:11:15.05:0,15,299	0/0:5,0:5:0.47:0,0,1
chr10	109137744	.	CGCGCGCGTGCGT	C	8508.68	PASS	AB=1.000;AC=30;AF=0.556;AN=54;BaseQRankSum=9.455;DP=435;FS=7.790;HRun=0;HaplotypeScore=172.6762;InbreedingCoeff=0.3787;MQ=52.40;MQ0=0;MQRankSum=-10.380;QD=27.10;ReadPosRankSum=7.346;VQSLOD=2.1147;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:45,0:45:32.27:939,0,32	0/0:7,0:7:21.04:0,21,771	./.	0/0:4,0:3:6.02:0,6,102	0/1:10,0:10:13.49:70,0,13	0/0:4,0:4:6:0,6,51	0/0:23,0:23:29.21:0,29,239	0/1:6,0:6:15.52:185,0,16	0/1:25,0:25:22.20:376,0,22	0/0:27,0:27:78.19:0,78,3377	0/0:16,0:16:42.14:0,42,2043	1/1:1,16:17:9.03:336,9,0	1/1:2,15:17:9.03:335,9,0	1/1:1,15:16:18.06:675,18,0	1/1:0,14:14:15.05:563,15,0	0/0:10,0:10:30.10:0,30,1763	0/1:27,0:27:0.14:603,0,0	1/1:25,0:25:15.64:1112,16,0	0/1:13,0:13:3.73:445,0,4	1/1:8,0:8:9.03:295,9,0	0/0:23,0:23:5.54:0,6,47	1/1:1,18:18:9.03:338,9,0	1/1:1,12:13:3.01:113,3,0	1/1:3,14:17:11.70:450,12,0	1/1:6,0:6:5.51:93,6,0	0/1:23,0:23:99:1097,0,146	1/1:8,0:8:15.05:486,15,0	0/1:5,0:5:0:0,0,0
chr10	109137748	.	CGCGTGCGTGCGT	C	9341.25	PASS	AB=0.776;AC=38;AF=0.704;AN=54;BaseQRankSum=8.104;DP=332;FS=5.866;HRun=0;HaplotypeScore=142.4955;InbreedingCoeff=0.6092;MQ=62.40;MQ0=2;MQRankSum=-9.454;QD=37.97;ReadPosRankSum=5.861;VQSLOD=3.8363;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:30.10:1152,30,0	0/0:8,0:8:21.06:0,21,788	0/0:13,0:6:6.02:0,6,74	0/1:7,0:5:12.27:12,0,69	1/1:8,0:8:6.49:80,6,0	0/0:2,0:2:2.51:0,3,16	0/0:11,0:11:4.80:0,5,65	1/1:2,2:4:6.02:231,6,0	1/1:19,0:19:20.82:406,21,0	0/0:27,0:27:69.17:0,69,3183	0/0:15,0:15:42.13:0,42,2089	1/1:16,0:16:9.03:281,9,0	1/1:15,0:15:9.03:298,9,0	1/1:15,0:15:18.06:573,18,0	1/1:14,0:14:15.05:472,15,0	0/0:10,0:10:30.10:0,30,1736	1/1:1,15:16:24.03:774,24,0	1/1:1,17:18:36.12:1386,36,0	1/1:0,6:6:15.05:559,15,0	1/1:0,4:4:9.03:346,9,0	1/1:2,5:7:0.47:1,0,0	1/1:18,0:17:9.03:286,9,0	1/1:12,0:12:3.01:94,3,0	1/1:15,0:15:11.70:379,12,0	1/1:5,0:5:5.51:93,6,0	0/1:3,13:16:99:1341,0,267	1/1:0,6:6:15.05:577,15,0	./.
chr10	109137941	.	ATT	A	1699.52	PASS	AB=0.762;AC=24;AF=0.429;AN=56;BaseQRankSum=6.120;DP=440;FS=0.484;HRun=16;HaplotypeScore=74.0457;InbreedingCoeff=0.5456;MQ=62.91;MQ0=6;MQRankSum=-2.212;QD=6.46;ReadPosRankSum=0.586;VQSLOD=-0.0606;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,20:35:53.30:444,53,0	0/0:6,0:9:8.94:0,9,69	0/0:16,0:7:5.48:0,5,32	0/0:17,0:7:9.64:0,10,74	0/1:11,1:21:27.06:27,0,60	0/1:14,4:19:64.24:64,0,77	0/1:6,0:13:2.07:2,0,58	1/1:14,12:27:18.08:280,18,0	0/0:7,1:17:4.09:0,4,101	0/1:12,0:14:5.55:6,0,118	0/0:17,0:17:17.32:0,17,165	0/0:13,0:13:23.28:0,23,233	0/0:15,0:17:30.82:0,31,284	0/0:10,0:10:10.85:0,11,121	0/0:7,0:7:15.05:0,15,187	0/0:13,0:14:23.91:0,24,258	1/1:13,4:18:24.31:139,24,0	1/1:6,7:12:20.96:163,21,0	1/1:7,3:13:16.38:96,16,0	1/1:5,6:12:24.45:158,24,0	1/1:7,7:15:34.89:251,35,0	0/0:7,0:7:15.02:0,15,165	0/0:11,0:11:17.35:0,17,170	0/0:20,0:20:30.02:0,30,371	0/1:16,0:21:17.60:18,0,60	0/1:10,3:14:5.27:74,0,5	1/1:10,1:12:16.17:85,16,0	1/1:6,2:9:8.39:93,8,0
chr10	109137955	.	TTTC	T	3497.11	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=3.441;DP=493;FS=5.073;HRun=0;HaplotypeScore=82.0730;InbreedingCoeff=0.7579;MQ=55.11;MQ0=29;MQRankSum=-3.982;QD=14.22;ReadPosRankSum=0.405;VQSLOD=2.8292;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:33:82.22:750,82,0	0/0:8,0:8:17.96:0,18,174	0/0:28,0:5:11.24:0,11,86	0/0:24,0:7:13.62:0,14,135	0/0:22,0:22:24.75:0,25,253	0/1:18,0:15:16.15:16,0,118	0/0:10,0:10:14.95:0,15,121	1/1:28,1:29:51.74:534,52,0	0/0:23,0:22:46.86:0,47,408	0/1:12,0:12:13.81:14,0,202	0/0:15,0:15:23.38:0,23,242	0/0:19,0:16:25.54:0,26,279	0/0:21,0:20:27.36:0,27,346	0/0:13,0:13:9.87:0,10,123	0/0:13,0:13:29.78:0,30,338	0/0:14,0:14:25.28:0,25,334	1/1:17,1:16:38.46:290,38,0	1/1:15,2:16:28.15:321,28,0	1/1:22,0:21:48.69:316,49,0	1/1:14,1:15:40.21:340,40,0	1/1:16,0:15:33.71:315,34,0	0/0:8,0:8:11.85:0,12,200	0/0:11,0:11:18:0,18,254	0/0:18,0:18:28.42:0,28,411	0/1:22,0:21:9.14:9,0,221	1/1:13,1:14:31.73:263,32,0	1/1:14,1:14:23.63:188,24,0	1/1:13,0:10:9.43:141,9,0
chr10	109137956	.	TTC	T	2662.44	PASS	AB=0.931;AC=24;AF=0.429;AN=56;BaseQRankSum=4.789;DP=486;FS=7.650;HRun=0;HaplotypeScore=75.8749;InbreedingCoeff=0.6243;MQ=54.96;MQ0=30;MQRankSum=-3.836;QD=10.69;ReadPosRankSum=0.875;VQSLOD=2.6784;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:32:81.95:536,82,0	0/0:8,0:8:17.71:0,18,141	0/0:28,0:5:9.92:0,10,67	0/0:24,0:7:15.43:0,15,127	0/0:20,2:22:1.86:0,2,152	0/1:16,1:14:55.83:68,0,56	0/1:8,1:9:8.95:9,0,43	1/1:27,0:27:60.70:405,61,0	0/0:23,0:22:41.19:0,41,259	0/1:11,1:12:34.78:35,0,142	0/0:15,0:15:2.83:0,3,160	0/0:19,0:16:6.82:0,7,178	0/0:21,0:20:23.27:0,23,240	0/0:12,0:12:11.70:0,12,90	0/0:13,0:13:29.77:0,30,287	0/0:14,0:14:22.32:0,22,247	1/1:17,1:16:38.49:264,38,0	1/1:17,0:16:34.06:226,34,0	1/1:22,0:21:48.59:272,49,0	1/1:15,0:15:40.03:251,40,0	1/1:14,0:13:35.10:239,35,0	0/0:8,0:8:11.83:0,12,158	0/0:12,0:12:17.66:0,18,210	0/0:18,0:18:28.96:0,29,326	0/1:21,1:21:61.56:62,0,146	1/1:13,1:13:31.70:215,32,0	1/1:13,2:14:23.61:194,24,0	1/1:13,0:10:9.30:93,9,0
chr10	109137958	.	CT	C	3643.47	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=3.992;DP=481;FS=0.430;HRun=16;HaplotypeScore=67.6438;InbreedingCoeff=0.9509;MQ=53.69;MQ0=31;MQRankSum=-4.224;QD=19.59;ReadPosRankSum=1.861;VQSLOD=4.0313;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,30:32:75.10:740,75,0	0/0:8,0:8:18.05:0,18,218	0/0:25,0:4:8.89:0,9,75	0/0:23,0:7:8.84:0,9,65	0/0:22,0:22:37.28:0,37,397	0/0:17,0:13:22.38:0,22,190	0/0:10,0:10:8.28:0,8,81	1/1:9,18:27:52.84:515,53,0	0/0:25,0:23:41.74:0,42,499	0/0:12,0:12:26.09:0,26,283	0/0:14,0:14:18.06:0,18,226	0/0:20,0:17:13.13:0,13,165	0/0:20,0:19:38.71:0,39,420	0/0:12,0:12:11.86:0,12,110	0/0:13,0:13:30.09:0,30,358	0/0:14,0:14:32.87:0,33,360	1/1:6,12:16:35.85:340,36,0	1/1:4,12:16:17.74:308,18,0	1/1:2,20:21:56.79:542,57,0	1/1:4,12:15:35.55:337,36,0	1/1:2,10:11:30.06:302,30,0	0/0:7,0:7:12.04:0,12,157	0/0:14,0:14:20.80:0,21,245	0/0:17,0:17:30.02:0,30,351	0/0:22,0:19:36.91:0,37,415	1/1:5,8:12:27.91:258,28,0	1/1:6,10:15:18.97:151,19,0	1/1:4,7:8:15.03:150,15,0
chr10	109138128	.	CTGTGGCTGGGTT	C	6328.45	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=11.868;DP=507;FS=1.728;HRun=0;HaplotypeScore=178.7351;InbreedingCoeff=0.8906;MQ=71.10;MQ0=0;MQRankSum=-11.371;QD=78.13;ReadPosRankSum=1.700;VQSLOD=4.5749;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,5976	0/0:8,0:8:21.07:0,21,1314	0/0:5,0:5:14.97:0,15,321	0/1:13,0:13:7.09:7,0,1346	1/1:0,18:19:41.88:1575,42,0	1/1:0,20:19:54.19:2010,54,0	1/1:0,12:12:27.09:1001,27,0	0/0:22,0:22:63.16:0,63,3423	1/1:0,8:7:18.06:694,18,0	0/0:19,0:19:57.20:0,57,3564	0/0:12,0:12:36.12:0,36,1768	0/0:15,0:15:45.15:0,45,2746	0/0:22,0:22:66.23:0,66,3934	0/0:18,0:18:45.15:0,45,2647	0/0:16,0:16:48.16:0,48,3041	0/0:19,0:19:51.16:0,51,2858	0/0:30,0:30:90.28:0,90,5269	0/0:16,0:16:45.15:0,45,2585	0/0:17,0:16:45.15:0,45,2675	0/0:17,0:17:48.14:0,48,2580	0/0:64,0:64:99:0,189,11259	0/0:14,0:14:39.12:0,39,2214	0/0:5,0:5:12.04:0,12,560	0/0:30,0:30:90.31:0,90,5583	1/1:0,9:9:27.09:1041,27,0	0/0:15,0:15:42.14:0,42,2515	0/0:21,0:21:63.22:0,63,3945	0/0:7,0:7:21.07:0,21,1314
chr10	109138241	.	GTT	G	2162.11	PASS	AB=0.627;AC=28;AF=0.500;AN=56;BaseQRankSum=-1.165;DP=573;FS=4.907;HRun=19;HaplotypeScore=76.0015;InbreedingCoeff=0.4963;MQ=65.01;MQ0=13;MQRankSum=-0.108;QD=6.30;ReadPosRankSum=3.364;VQSLOD=-0.6896;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,12:30:40.02:111,0,40	0/0:5,0:7:14.38:0,14,128	0/0:48,0:13:7.88:0,8,60	0/0:40,0:15:8.73:0,9,61	0/0:9,0:21:42.17:0,42,385	0/0:5,0:15:22.85:0,23,207	0/0:5,0:13:23.91:0,24,220	1/1:14,14:33:35.53:251,36,0	0/0:6,0:15:14.76:0,15,130	0/0:20,0:22:37.94:0,38,331	0/0:13,0:16:7.58:0,8,206	1/1:8,10:21:34.26:214,34,0	0/1:8,7:22:71.55:72,0,122	0/1:8,3:19:42.53:55,0,43	1/1:8,5:20:16.61:163,17,0	0/0:13,0:13:17.64:0,18,186	1/1:8,11:22:19.38:171,19,0	1/1:9,20:36:29.80:389,30,0	0/1:7,4:16:25.35:89,0,25	1/1:8,8:17:16.29:134,16,0	0/1:8,7:18:8.92:76,0,9	1/1:3,5:10:9.30:96,9,0	1/1:6,5:14:19.33:118,19,0	1/1:7,9:16:5.41:76,5,0	0/0:4,0:15:12.02:0,12,118	0/1:6,12:19:30.04:199,0,30	1/1:9,8:19:10.36:100,10,0	1/1:5,0:7:8.36:53,8,0
chr10	109139238	.	CAG	C	438.89	PASS	AB=0.955;AC=12;AF=0.214;AN=56;BaseQRankSum=-0.882;DP=262;FS=55.475;HRun=0;HaplotypeScore=36.5352;InbreedingCoeff=-0.1567;MQ=75.35;MQ0=1;MQRankSum=-0.413;QD=4.03;ReadPosRankSum=0.175;VQSLOD=-0.0138;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:99:104,0,282	0/0:6,0:6:8.90:0,9,151	0/1:4,2:6:56.98:57,0,62	0/0:9,0:9:8.56:0,9,117	0/0:10,0:10:27.08:0,27,400	0/0:13,0:13:36.08:0,36,525	0/0:18,0:18:51.14:0,51,845	0/1:6,2:8:41.34:41,0,230	0/0:13,0:13:32.90:0,33,385	0/0:8,0:8:24.08:0,24,418	0/0:7,0:7:18.02:0,18,262	0/0:8,1:9:1.37:0,1,251	0/1:8,0:8:3.75:4,0,246	0/0:15,1:16:10.75:0,11,332	0/1:9,0:9:20.94:21,0,162	0/0:8,0:8:24.08:0,24,390	0/1:20,0:19:99:169,0,395	0/0:9,0:9:11.86:0,12,150	0/1:3,0:3:28.38:28,0,63	0/0:2,0:2:6.02:0,6,98	0/1:15,0:14:39.37:39,0,305	0/0:6,0:6:15:0,15,220	0/1:5,0:5:12.04:12,0,121	0/0:5,0:5:8.99:0,9,146	0/0:9,0:9:14.76:0,15,244	0/0:5,0:5:6.63:0,7,160	0/1:18,0:18:66.51:67,0,536	1/1:2,0:2:3.01:41,3,0
chr10	109140482	.	TG	T	1610.14	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=2.228;DP=530;FS=9.003;HRun=2;HaplotypeScore=81.2180;InbreedingCoeff=0.9885;MQ=77.15;MQ0=6;MQRankSum=-0.083;QD=16.77;ReadPosRankSum=3.352;VQSLOD=3.1794;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:45.07:0,45,471	0/0:8,0:8:20.34:0,20,276	0/0:44,0:23:33.31:0,33,368	0/0:25,0:16:29.46:0,29,224	1/1:33,2:36:94.91:787,95,0	1/1:16,0:16:27.01:240,27,0	1/1:17,1:18:30.02:277,30,0	0/0:39,0:39:99:0,106,1044	1/1:14,0:14:21.01:187,21,0	0/0:20,0:20:54.15:0,54,699	0/0:23,0:23:52.27:0,52,775	0/0:12,0:12:31.24:0,31,294	0/0:17,0:17:51.03:0,51,497	0/0:12,0:11:24.03:0,24,249	0/0:14,0:14:30.07:0,30,330	0/0:16,0:16:22.04:0,22,514	0/0:21,0:21:45.02:0,45,441	0/0:29,0:30:68.47:0,68,611	0/0:15,0:15:22.01:0,22,375	0/0:19,0:19:53.27:0,53,522	0/0:14,0:14:18.43:0,18,263	0/0:6,0:6:14.95:0,15,123	0/0:12,0:12:29.43:0,29,314	0/0:7,0:7:21.05:0,21,230	1/1:11,1:12:33.82:294,34,0	0/0:17,0:17:44.70:0,45,431	0/0:27,0:26:53.70:0,54,519	0/0:13,0:13:33.02:0,33,317
chr10	109140483	.	GGT	G	2493.75	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-1.653;DP=528;FS=4.399;HRun=0;HaplotypeScore=83.9219;InbreedingCoeff=0.9352;MQ=77.40;MQ0=6;MQRankSum=0.876;QD=25.98;ReadPosRankSum=3.943;VQSLOD=4.7313;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:45.11:0,45,653	0/0:8,0:8:24.05:0,24,381	0/0:44,0:23:35.86:0,36,448	0/0:25,0:16:19.36:0,19,211	1/1:4,31:36:94.58:1202,95,0	1/1:0,14:16:27.09:396,27,0	1/1:1,15:18:29.68:404,30,0	0/0:38,0:38:99:0,111,1391	1/1:1,13:14:1.01:306,1,0	0/0:19,0:19:57.16:0,57,941	0/0:23,0:23:56.25:0,56,1090	0/0:12,0:12:33.09:0,33,455	0/0:17,0:17:51.09:0,51,676	0/0:11,0:10:24.05:0,24,332	0/0:13,0:13:30.09:0,30,457	0/0:17,0:17:46:0,46,739	0/0:21,0:21:45.07:0,45,588	0/0:29,0:29:68.68:0,69,807	0/0:15,0:15:37.91:0,38,524	0/0:20,0:20:56.59:0,57,746	0/0:13,0:13:32.67:0,33,420	0/0:6,0:6:14.97:0,15,156	0/0:12,0:12:33.02:0,33,444	0/0:7,0:7:21.06:0,21,313	1/1:7,5:12:20.66:351,21,0	0/0:17,0:17:46.27:0,46,573	0/0:28,0:27:57.99:0,58,760	0/0:13,0:13:33.04:0,33,411
chr10	109140484	.	G	GTT	4250.42	PASS	AB=0.736;AC=33;AF=0.589;AN=56;BaseQRankSum=-7.874;DP=551;FS=2.011;HRun=14;HaplotypeScore=89.3069;InbreedingCoeff=0.7430;MQ=76.83;MQ0=6;MQRankSum=0.688;QD=13.12;ReadPosRankSum=-1.629;VQSLOD=3.7678;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,15:24:32.46:380,32,0	0/1:7,0:8:3.32:3,0,116	0/0:44,0:25:9.73:0,10,89	0/0:24,0:15:6.38:0,6,47	0/0:36,0:36:66.86:0,67,316	0/0:17,0:17:25.14:0,25,115	0/0:18,0:18:28:0,28,130	1/1:15,19:41:76.46:841,76,0	0/0:14,0:14:19.45:0,19,89	0/0:18,0:19:29.82:0,30,290	0/0:21,0:24:47.47:0,47,426	1/1:1,1:13:13.09:95,13,0	1/1:5,1:18:29.09:132,29,0	0/1:4,0:11:10.24:27,0,10	1/1:4,1:15:14.87:82,15,0	0/0:14,0:17:17.79:0,18,230	1/1:5,14:23:31.77:324,32,0	1/1:11,16:30:28.48:376,28,0	1/1:10,1:16:4.91:175,5,0	1/1:7,9:22:20.43:390,20,0	1/1:3,8:13:25.78:264,26,0	1/1:3,0:6:2.37:9,2,0	0/1:5,0:14:7.38:55,0,7	1/1:2,0:7:11.86:42,12,0	0/0:12,0:12:21.07:0,21,97	1/1:8,7:19:28.68:278,29,0	1/1:5,22:28:25.89:544,26,0	1/1:4,8:14:20.42:233,20,0
chr10	109141767	.	TG	T	4553.74	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.773;DP=819;FS=5.561;HRun=3;HaplotypeScore=77.7800;InbreedingCoeff=1.0000;MQ=80.37;MQ0=1;MQRankSum=-2.030;QD=33.73;ReadPosRankSum=0.751;VQSLOD=5.3806;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.28:0,84,1209	0/0:13,0:13:39.13:0,39,561	0/0:29,0:29:72.23:0,72,1011	0/0:29,1:30:67.87:0,68,926	1/1:2,27:29:75.15:909,75,0	1/1:0,19:19:51.16:632,51,0	1/1:1,36:37:99:1302,105,0	0/0:24,0:24:66.22:0,66,935	1/1:0,32:32:93.29:1153,93,0	0/0:33,0:33:99:0,99,1399	0/0:16,0:16:42.13:0,42,586	0/0:40,0:40:99:0,117,1645	0/0:39,0:39:99:0,117,1646	0/0:41,0:41:99:0,123,1751	0/0:34,0:34:96.31:0,96,1364	0/0:32,0:32:93.31:0,93,1339	0/0:43,0:43:99:0,126,1811	0/0:31,0:30:87.28:0,87,1230	0/0:21,0:21:57.17:0,57,785	0/0:24,0:24:72.22:0,72,1017	0/0:75,0:75:99:0,217,3055	0/0:20,0:20:57.18:0,57,801	0/0:18,0:18:51.16:0,51,717	0/0:21,0:21:63.21:0,63,907	1/1:0,18:18:45.14:558,45,0	0/0:30,0:30:87.29:0,87,1238	0/0:28,0:28:81.27:0,81,1166	0/0:13,0:13:39.13:0,39,561
chr10	109144184	.	AT	A	2568.02	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=0.555;DP=493;FS=9.924;HRun=8;HaplotypeScore=73.9156;InbreedingCoeff=0.7983;MQ=80.44;MQ0=2;MQRankSum=-0.574;QD=14.67;ReadPosRankSum=1.725;VQSLOD=2.8775;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:12:0,12,120	0/0:10,0:10:30.09:0,30,360	0/1:45,0:20:7.40:7,0,217	0/0:42,1:29:7.74:0,8,401	0/0:20,0:22:59.81:0,60,636	0/0:36,0:37:75.03:0,75,826	0/0:34,0:35:84.10:0,84,969	0/0:17,0:17:45.11:0,45,506	0/0:14,0:14:36.09:0,36,422	1/1:5,23:28:68.91:624,69,0	0/0:24,0:24:48.80:0,49,749	1/1:1,9:10:15.02:145,15,0	1/1:4,6:10:27.02:254,27,0	1/1:4,7:11:30.05:289,30,0	1/1:3,15:18:48.08:463,48,0	0/0:27,0:27:69.19:0,69,814	0/0:5,0:5:6.02:0,6,72	0/0:3,0:4:8.86:0,9,87	0/0:13,0:13:24.07:0,24,289	0/0:12,0:12:33.06:0,33,378	0/0:3,0:3:9.03:0,9,109	1/1:3,14:17:36.04:346,36,0	1/1:1,10:11:23.54:231,24,0	1/1:6,11:17:42.06:405,42,0	0/0:28,0:28:37.64:0,38,408	0/1:8,0:8:7.70:8,0,64	0/0:12,0:12:21.03:0,21,221	0/0:3,0:3:9.03:0,9,109
chr10	109144204	.	TTC	T	4063.91	PASS	AB=0.950;AC=14;AF=0.250;AN=56;BaseQRankSum=-3.556;DP=458;FS=11.568;HRun=0;HaplotypeScore=81.7379;InbreedingCoeff=0.6851;MQ=82.45;MQ0=4;MQRankSum=0.401;QD=21.28;ReadPosRankSum=4.932;VQSLOD=3.5144;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:2.04:6,2,0	0/1:8,1:9:22.77:23,0,286	0/0:61,0:29:38.37:0,38,703	0/1:53,0:33:33.40:33,0,557	1/1:2,14:16:39.10:589,39,0	1/1:1,31:32:63.21:1015,63,0	1/1:5,35:40:86.98:1334,87,0	0/0:10,0:10:18:0,18,168	1/1:3,13:16:45.14:695,45,0	0/0:26,0:26:78.27:0,78,1531	0/0:27,0:27:77.61:0,78,1323	0/0:7,0:7:20.98:0,21,251	0/0:11,0:11:33.01:0,33,399	0/0:11,0:11:33.09:0,33,440	0/0:18,0:18:51.05:0,51,686	0/0:19,0:19:57.15:0,57,1059	0/0:4,0:4:9.03:0,9,110	0/0:4,0:4:6.02:0,6,95	0/0:4,0:4:8.91:0,9,92	0/0:9,0:10:26.87:0,27,287	0/0:3,0:3:9.02:0,9,101	0/0:13,0:13:39.10:0,39,487	0/0:9,0:9:27.05:0,27,343	0/0:19,0:19:51.08:0,51,636	1/1:2,19:21:23.81:369,24,0	0/0:5,0:5:15.04:0,15,210	0/0:3,0:5:9.01:0,9,113	0/0:1,0:1:3.01:0,3,40
chr10	109144205	.	T	TC	1792.05	PASS	AB=0.810;AC=32;AF=0.571;AN=56;BaseQRankSum=-4.216;DP=462;FS=7.535;HRun=9;HaplotypeScore=84.8023;InbreedingCoeff=0.5449;MQ=82.93;MQ0=4;MQRankSum=-1.421;QD=9.19;ReadPosRankSum=-3.964;VQSLOD=1.3257;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:6:3:27,3,0	0/0:9,0:9:14.21:0,14,111	0/0:60,0:30:17.03:0,17,231	0/1:53,0:32:40.10:40,0,153	0/0:16,0:16:19.03:0,19,65	0/0:32,0:32:46.44:0,46,143	0/0:40,0:40:59.20:0,59,180	0/1:7,2:10:0:0,0,0	0/0:14,0:16:24.61:0,25,80	0/0:26,0:26:71.14:0,71,592	0/0:25,0:27:55.02:0,55,454	1/1:6,1:7:9.02:91,9,0	0/1:9,2:11:18.53:137,0,19	1/1:7,3:11:4.01:255,4,0	1/1:11,6:17:42.02:411,42,0	0/0:18,0:18:38.92:0,39,334	1/1:1,0:4:8.36:40,8,0	1/1:1,0:4:2.84:14,3,0	1/1:5,1:6:2.99:25,3,0	1/1:5,0:9:8.85:68,9,0	1/1:2,0:3:5.85:48,6,0	1/1:8,6:14:1.09:239,1,0	1/1:9,0:9:15.02:151,15,0	1/1:13,5:19:32.08:350,32,0	0/0:21,0:21:15.91:0,16,49	0/1:2,0:5:14.28:38,0,14	1/1:5,0:5:3.01:33,3,0	1/1:1,0:2:2.84:14,3,0
chr10	109145604	.	TACACACAC	T	4011.71	PASS	AB=0.976;AC=22;AF=0.393;AN=56;BaseQRankSum=4.585;DP=714;FS=0.000;HRun=0;HaplotypeScore=196.5637;InbreedingCoeff=0.3445;MQ=64.61;MQ0=12;MQRankSum=-7.208;QD=11.76;ReadPosRankSum=-0.487;VQSLOD=2.6143;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:32.34:32,0,180	0/0:12,0:13:30.10:0,30,843	0/0:36,0:24:2.90:0,3,60	0/0:52,0:31:14.94:0,15,197	0/0:15,0:15:11.95:0,12,155	0/0:21,0:23:11.32:0,11,195	0/0:34,0:35:41.43:0,41,596	0/0:29,0:28:26.81:0,27,348	0/0:26,0:26:23.61:0,24,299	0/0:25,0:25:50.76:0,51,1515	0/0:13,0:13:21.07:0,21,481	1/1:17,8:23:19.67:902,20,0	1/1:14,4:18:35.91:705,36,0	1/1:21,6:27:44.84:814,45,0	1/1:17,0:30:4.63:132,5,0	0/0:34,0:33:75.23:0,75,2080	0/1:33,0:35:27.20:27,0,230	0/1:15,0:14:25.72:26,0,285	0/1:21,0:21:20.71:21,0,115	0/1:18,0:19:2.87:3,0,215	0/0:46,0:48:31.48:0,31,479	1/1:7,7:14:7.39:447,7,0	1/1:9,5:14:26.62:472,27,0	1/1:18,2:20:14.96:288,15,0	0/0:18,0:16:8.60:0,9,131	0/1:22,0:22:31.77:32,0,302	0/1:20,0:20:23.03:23,0,308	0/1:21,0:21:85.71:89,0,86
chr10	109145624	.	CACACACACACTT	C	3838.39	PASS	AB=0.948;AC=27;AF=0.500;AN=54;BaseQRankSum=-1.348;DP=724;FS=1.029;HRun=0;HaplotypeScore=241.9735;InbreedingCoeff=0.4428;MQ=48.50;MQ0=16;MQRankSum=1.782;QD=8.63;ReadPosRankSum=-1.019;VQSLOD=1.9546;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,31:41:3.66:146,4,0	0/0:15,0:14:33.11:0,33,736	0/1:10,0:5:0:0,0,0	./.	0/1:17,0:17:0.01:0,0,0	0/1:20,0:19:99:123,0,205	0/1:35,0:33:57.76:154,0,58	1/1:35,0:23:16.31:221,16,0	0/1:21,0:20:40.50:40,0,98	0/0:30,0:29:59.36:0,59,1514	0/0:12,0:12:10.28:0,10,390	0/0:26,0:29:4.31:0,4,173	0/1:16,0:20:43.56:44,0,92	0/0:19,0:23:19.93:0,20,109	0/0:31,0:31:12.89:0,13,296	0/0:40,0:38:72.13:0,72,2088	1/1:9,26:35:4.07:139,4,0	1/1:19,0:18:36.07:532,36,0	0/1:9,12:19:14.58:546,0,15	1/1:7,14:19:9.03:137,9,0	1/1:58,0:57:35.04:486,35,0	0/0:20,0:21:16.57:0,17,102	0/0:17,0:20:17.17:0,17,134	0/0:22,0:30:7.03:0,7,138	1/1:18,0:16:3.95:37,4,0	1/1:11,19:30:48.11:756,48,0	1/1:9,13:21:5.18:140,5,0	1/1:9,13:21:18.06:336,18,0
chr10	109145642	.	CACACTT	C	3623.53	PASS	AB=0.952;AC=23;AF=0.426;AN=54;BaseQRankSum=3.121;DP=703;FS=13.384;HRun=0;HaplotypeScore=200.4080;InbreedingCoeff=-0.3595;MQ=47.14;MQ0=14;MQRankSum=-2.484;QD=7.01;ReadPosRankSum=3.759;VQSLOD=1.7118;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:37:33:33,0,81	0/0:18,0:17:45.62:0,46,1153	./.	0/0:6,0:1:1.55:0,2,4	0/0:17,0:17:2.89:0,3,10	1/1:23,0:22:13.08:321,13,0	0/1:31,0:29:44.01:255,0,44	0/1:38,0:26:99:194,0,470	0/1:17,0:16:11.24:80,0,11	0/0:30,0:29:81.16:0,81,1597	0/0:7,0:7:14.79:0,15,345	0/1:29,1:28:30.35:176,0,30	0/1:18,5:23:22.71:588,0,23	0/1:24,2:26:43.37:171,0,43	0/1:33,0:32:99:193,0,270	0/0:38,0:36:96.98:0,97,2620	0/1:30,0:30:15.89:70,0,16	0/1:17,0:16:99:195,0,250	0/1:29,0:21:99:272,0,262	0/1:20,0:18:35.84:146,0,36	0/0:67,0:65:76.88:0,77,989	0/1:14,12:27:41.84:150,0,42	0/1:20,2:22:65.80:215,0,66	0/1:27,5:32:99:152,0,123	1/1:16,0:14:3.64:37,4,0	0/1:25,0:25:99:271,0,201	0/1:22,0:21:24.49:24,0,275	1/1:19,0:18:7.13:78,7,0
chr10	109147478	.	CA	C	1331.06	PASS	AB=0.875;AC=11;AF=0.196;AN=56;BaseQRankSum=9.520;DP=467;FS=1.087;HRun=9;HaplotypeScore=44.9997;InbreedingCoeff=0.8433;MQ=77.20;MQ0=3;MQRankSum=0.370;QD=16.85;ReadPosRankSum=2.861;VQSLOD=3.5524;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.16:0,57,647	0/0:10,0:10:27.08:0,27,308	0/0:34,0:14:15.52:0,16,122	0/0:20,0:12:10.31:0,10,76	1/1:1,16:17:44.93:400,45,0	1/1:3,13:16:7.41:322,7,0	1/1:0,6:6:9:82,9,0	0/0:39,0:39:99:0,99,1060	1/1:0,15:15:36.02:329,36,0	0/0:18,0:18:54.14:0,54,604	0/0:20,0:20:57.11:0,57,633	0/0:11,0:11:30.08:0,30,336	0/0:12,0:12:33.02:0,33,327	0/0:18,0:18:48.14:0,48,554	0/0:18,0:18:48.12:0,48,533	0/0:14,0:14:42.09:0,42,462	0/0:20,0:20:60.18:0,60,692	0/0:15,0:15:45.06:0,45,482	0/0:21,0:21:46.35:0,46,497	0/0:20,0:20:54.15:0,54,615	0/1:6,1:7:9.42:9,0,146	0/0:6,0:6:15.03:0,15,163	0/0:12,0:12:33.10:0,33,380	0/0:4,0:4:12.02:0,12,129	1/1:1,17:18:39.02:357,39,0	0/0:20,0:20:54.15:0,54,614	0/0:20,0:20:60.14:0,60,661	0/0:15,0:15:39.12:0,39,450
chr10	109152703	.	TAGGGCTC	T	6827.63	PASS	AB=0.963;AC=11;AF=0.196;AN=56;BaseQRankSum=15.603;DP=732;FS=0.814;HRun=0;HaplotypeScore=179.3665;InbreedingCoeff=0.9361;MQ=80.11;MQ0=0;MQRankSum=-15.125;QD=48.42;ReadPosRankSum=-1.173;VQSLOD=4.6854;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,4760	0/0:9,0:9:27.09:0,27,1088	0/0:20,0:20:57.19:0,57,1938	0/0:20,0:20:30.75:0,31,1740	1/1:1,25:26:57.05:851,57,0	1/1:0,17:17:45.15:1185,45,0	1/1:0,27:27:78.18:1935,78,0	0/0:24,0:24:69.24:0,69,2670	1/1:2,18:20:48.16:1217,48,0	0/0:28,0:28:81.27:0,81,3149	0/0:24,0:24:72.25:0,72,2907	0/0:24,0:24:72.24:0,72,2795	0/0:32,0:32:93.32:0,93,3625	0/0:29,0:29:84.29:0,84,3279	0/0:26,0:26:78.26:0,78,2984	0/1:25,1:26:0.76:1,0,2632	0/0:51,0:51:99:0,151,5977	0/0:36,0:36:99:0,102,3798	0/0:22,0:22:60.21:0,60,2397	0/0:20,0:20:57.18:0,57,2159	0/0:51,0:51:99:0,154,6059	0/0:13,0:13:37.01:0,37,1433	0/0:16,0:16:48.14:0,48,1667	0/0:41,0:41:99:0,120,4416	1/1:0,25:25:69.01:1639,69,0	0/0:26,0:26:78.27:0,78,3150	0/0:23,0:22:69.22:0,69,2599	0/0:16,0:16:48.16:0,48,1922
chr10	109154390	.	C	CGAAAAAAA	3958.16	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=2.792;DP=628;FS=0.000;HRun=0;HaplotypeScore=162.0255;InbreedingCoeff=0.9663;MQ=53.57;MQ0=15;MQRankSum=-8.100;QD=47.12;ReadPosRankSum=-0.083;VQSLOD=3.4261;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,111,2337	0/0:13,0:13:23.79:0,24,463	0/0:27,0:3:9.03:0,9,164	0/0:15,0:3:8.90:0,9,125	1/1:24,2:26:47.99:974,48,0	1/1:14,0:14:27.03:628,27,0	1/1:15,0:15:18.02:503,18,0	0/0:23,0:23:48.11:0,48,977	1/1:11,1:11:24:677,24,0	0/0:34,0:34:93.13:0,93,1904	0/0:14,0:14:21.07:0,21,523	0/0:22,0:22:51.14:0,51,1055	0/0:17,0:17:41.93:0,42,784	0/0:20,0:20:36.06:0,36,675	0/0:26,0:26:53.77:0,54,1212	0/0:28,0:28:54.14:0,54,1147	0/0:25,0:25:21.64:0,22,1196	0/0:26,0:26:69.09:0,69,1479	0/0:25,0:25:54.08:0,54,1080	0/0:21,0:21:51.11:0,51,1188	0/0:23,0:23:63.03:0,63,1391	0/0:19,0:19:45.11:0,45,839	0/0:10,0:9:18.02:0,18,317	0/0:36,0:35:62.69:0,63,1360	1/1:16,1:17:36.12:1176,36,0	0/0:31,0:30:72.24:0,72,1760	0/0:32,0:32:66.19:0,66,1548	0/0:14,0:14:33.10:0,33,797
chr10	109154399	.	G	GA	1948.09	PASS	AB=0.837;AC=21;AF=0.375;AN=56;BaseQRankSum=2.822;DP=689;FS=14.905;HRun=13;HaplotypeScore=95.1593;InbreedingCoeff=0.5354;MQ=57.04;MQ0=5;MQRankSum=-2.392;QD=6.45;ReadPosRankSum=3.803;VQSLOD=0.9097;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:43:99:0,103,696	0/0:13,0:13:28.06:0,28,188	0/1:19,0:6:6.65:7,0,25	0/0:10,0:5:1.79:0,2,6	0/1:27,0:28:2.23:36,0,2	1/1:17,0:17:13.99:66,14,0	0/1:20,0:20:9.14:29,0,9	0/0:26,1:27:34.17:0,34,375	1/1:14,0:14:12.95:73,13,0	0/0:36,1:40:52.58:0,53,483	0/0:13,0:15:6.70:0,7,152	0/1:8,17:25:19.34:265,0,19	1/1:5,15:20:8.69:252,9,0	1/1:8,17:25:38.93:337,39,0	1/1:6,22:28:6.69:348,7,0	0/0:26,0:26:28.55:0,29,342	0/0:26,0:26:53.07:0,53,358	0/0:29,0:29:50.50:0,51,349	0/0:24,0:26:54.51:0,55,355	0/0:17,1:19:27.30:0,27,272	0/0:26,4:30:5.25:0,5,318	1/1:12,8:19:13.51:239,14,0	1/1:7,6:15:5.62:78,6,0	0/1:11,25:38:46.14:317,0,46	1/1:30,0:30:1.54:89,2,0	0/0:31,0:33:44.32:0,44,410	0/0:30,0:30:74.11:0,74,513	0/0:19,0:20:43.63:0,44,293
chr10	109154400	.	A	AAAAAAGG	3538.07	PASS	AB=0.576;AC=9;AF=0.161;AN=56;BaseQRankSum=3.528;DP=708;FS=1.886;HRun=0;HaplotypeScore=172.4947;InbreedingCoeff=0.8023;MQ=57.24;MQ0=5;MQRankSum=-7.273;QD=29.48;ReadPosRankSum=1.284;VQSLOD=3.2824;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,2370	0/0:13,0:13:9.07:0,9,457	0/0:19,0:6:5.05:0,5,147	0/0:9,0:5:4.09:0,4,77	1/1:14,13:29:28.21:694,28,0	1/1:3,13:18:15.01:543,15,0	0/1:5,13:19:10.18:466,0,10	0/0:29,0:29:69.95:0,70,1054	1/1:4,12:16:23.43:700,23,0	0/0:41,0:41:52.55:0,53,1675	0/0:15,0:15:41.99:0,42,599	0/0:25,0:25:53.69:0,54,705	0/0:21,0:20:37.21:0,37,498	0/0:25,0:25:46.89:0,47,465	0/0:30,0:30:59.69:0,60,827	0/0:26,0:26:65.05:0,65,1176	0/0:26,0:26:61.87:0,62,1140	0/0:28,0:28:66.18:0,66,1319	0/0:29,0:29:57.34:0,57,1098	0/0:20,0:20:54.07:0,54,1100	0/0:30,0:30:51.41:0,51,1278	0/0:21,0:20:45.06:0,45,562	0/0:14,0:15:23.39:0,23,268	0/0:39,0:38:69.30:0,69,960	1/1:6,26:37:32.30:1135,32,0	0/0:34,0:34:73.87:0,74,1620	0/0:30,0:30:84.12:0,84,1611	0/0:20,0:20:54.12:0,54,888
chr10	109155473	.	CT	C	689.31	PASS	AB=0.778;AC=21;AF=0.375;AN=56;BaseQRankSum=-0.264;DP=254;FS=10.279;HRun=3;HaplotypeScore=48.6048;InbreedingCoeff=0.7218;MQ=88.16;MQ0=3;MQRankSum=0.555;QD=7.66;ReadPosRankSum=0.057;VQSLOD=-0.3710;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:22.13:0,22,169	0/0:3,0:3:8.86:0,9,76	0/0:31,0:21:25.89:0,26,343	0/0:28,0:23:23:0,23,272	0/1:5,2:7:3.21:15,0,3	1/1:7,0:8:11.66:85,12,0	1/1:10,2:12:12.48:173,12,0	0/0:8,0:8:15.49:0,15,141	1/1:7,2:9:3.71:110,4,0	0/0:11,0:11:8:0,8,179	0/0:4,0:4:2.13:0,2,5	1/1:10,1:11:4.56:126,5,0	1/1:6,0:6:6.83:84,7,0	1/1:9,1:10:11.49:71,11,0	1/1:5,1:6:7.67:57,8,0	0/0:15,0:14:33.46:0,33,392	0/0:10,0:10:23.72:0,24,196	0/0:10,0:10:29.94:0,30,265	0/0:4,0:4:12.01:0,12,119	0/0:6,0:6:6.28:0,6,61	0/0:9,0:8:16.24:0,16,146	1/1:4,1:5:2.68:18,3,0	0/0:4,0:4:7.46:0,7,42	1/1:8,1:9:15.57:68,16,0	1/1:5,2:7:9.42:71,9,0	0/0:4,0:4:12:0,12,129	0/0:6,0:6:11.97:0,12,108	0/0:2,0:2:3.01:0,3,31
chr10	109155530	.	G	GT	3512.92	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=2.835;DP=419;FS=3.109;HRun=10;HaplotypeScore=56.6105;InbreedingCoeff=0.9369;MQ=69.88;MQ0=1;MQRankSum=1.966;QD=21.29;ReadPosRankSum=1.326;VQSLOD=4.7521;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:53.91:0,54,442	0/0:5,0:5:14.98:0,15,123	0/0:22,0:16:21.97:0,22,172	0/0:17,0:15:14.28:0,14,146	1/1:3,12:16:17.43:373,17,0	1/1:3,11:15:8.67:294,9,0	1/1:2,12:16:41.81:413,42,0	0/0:26,0:26:62.90:0,63,515	1/1:3,8:11:16.12:145,16,0	0/0:14,0:14:35.94:0,36,296	0/0:14,0:14:38.95:0,39,320	1/1:2,9:11:2.42:230,2,0	1/1:1,5:6:14.97:146,15,0	1/1:4,17:21:47.99:480,48,0	1/1:0,10:10:27.07:288,27,0	0/0:13,0:13:38.93:0,39,317	0/0:15,0:16:32.91:0,33,266	0/0:16,0:18:38.93:0,39,318	0/0:18,0:18:47.93:0,48,394	0/0:15,0:15:44.95:0,45,369	0/0:7,0:7:11.98:0,12,99	1/1:1,9:10:21.05:222,21,0	1/1:3,18:22:20.30:405,20,0	1/1:2,8:10:20.20:222,20,0	1/1:4,13:17:8.44:295,8,0	0/0:22,1:23:56.92:0,57,466	0/0:14,0:13:41.95:0,42,345	0/0:7,0:7:17.97:0,18,148
chr10	109160305	.	CTTT	C	4981.51	PASS	AB=0.923;AC=11;AF=0.196;AN=56;BaseQRankSum=13.284;DP=671;FS=0.805;HRun=6;HaplotypeScore=98.6347;InbreedingCoeff=0.8932;MQ=78.28;MQ0=0;MQRankSum=0.975;QD=34.84;ReadPosRankSum=0.650;VQSLOD=3.1891;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,2789	0/0:17,0:17:51.18:0,51,1150	0/0:18,0:18:47.99:0,48,935	0/0:14,0:14:39.10:0,39,711	1/1:1,22:23:50.99:804,51,0	1/1:1,31:32:84.28:1343,84,0	1/1:1,28:29:75.25:1199,75,0	0/0:35,0:35:99:0,105,2325	1/1:4,16:20:33.11:528,33,0	0/0:29,0:29:87.30:0,87,1949	0/0:21,0:21:63.22:0,63,1427	0/0:25,0:25:75.26:0,75,1684	0/0:17,0:17:48.16:0,48,1071	0/0:15,0:15:45.15:0,45,1020	0/0:19,0:19:57.18:0,57,1249	0/1:11,1:11:11.87:12,0,712	0/0:31,0:31:90.28:0,90,1993	0/0:25,0:25:75.26:0,75,1700	0/0:20,0:20:57.20:0,57,1290	0/0:34,0:34:99:0,102,2297	0/0:27,0:27:81.26:0,81,1774	0/0:18,0:18:51.18:0,51,1155	0/0:29,0:29:84.29:0,84,1896	0/0:23,0:23:69.24:0,69,1563	1/1:0,27:27:72.16:1096,72,0	0/0:30,0:30:90.31:0,90,2013	0/0:20,0:20:60.21:0,60,1359	0/0:17,0:17:51.16:0,51,1112
chr10	109161546	.	ACACAGAGCAGGCGTGT	A	8397.71	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.528;DP=838;FS=11.866;HRun=0;HaplotypeScore=387.1197;InbreedingCoeff=0.9993;MQ=75.36;MQ0=0;MQRankSum=-10.475;QD=73.02;ReadPosRankSum=-2.658;VQSLOD=3.0440;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,7323	0/0:15,0:15:39.09:0,39,2708	0/0:19,0:19:42.76:0,43,1624	0/0:15,0:15:42.14:0,42,1949	1/1:15,8:23:36.55:1033,37,0	1/1:10,10:20:51.13:1785,51,0	1/1:5,14:19:45.15:1889,45,0	0/0:32,0:32:53.43:0,53,4327	1/1:12,15:27:51.16:2150,51,0	0/0:33,0:33:93.31:0,93,5954	0/0:17,0:17:42.10:0,42,2617	0/0:49,0:49:99:0,141,9359	0/0:41,0:41:99:0,120,7780	0/0:38,0:38:99:0,105,7022	0/0:31,0:31:81.28:0,81,5863	0/0:37,0:37:99:0,105,7564	0/0:54,0:54:66.03:0,66,8319	0/0:37,0:37:99:0,99,6432	0/0:16,0:15:30.10:0,30,1777	0/0:26,0:26:37.29:0,37,3269	0/0:71,0:71:99:0,151,12512	0/0:23,0:23:60.19:0,60,4062	0/0:18,0:18:54.19:0,54,3663	0/0:34,0:34:99:0,99,6524	1/1:18,8:26:48.08:1540,48,0	0/0:30,0:30:78.20:0,78,4461	0/0:36,0:35:72.29:0,72,5338	0/0:10,0:10:24.08:0,24,1248
chr10	109161554	.	CA	C	1191.87	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.127;DP=811;FS=6.113;HRun=1;HaplotypeScore=151.0118;InbreedingCoeff=0.9983;MQ=76.72;MQ0=0;MQRankSum=-10.695;QD=14.71;ReadPosRankSum=-2.437;VQSLOD=2.4980;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,115,771	0/0:17,0:17:48.12:0,48,729	0/0:18,0:18:20.40:0,20,620	0/0:16,0:16:45.15:0,45,717	1/1:11,3:14:25.43:255,25,0	1/1:14,3:17:45.24:353,45,0	1/1:16,0:16:35.11:200,35,0	0/0:33,0:33:63.29:0,63,574	1/1:17,0:17:41.93:192,42,0	0/0:35,0:35:99:0,99,1545	0/0:16,0:16:48.12:0,48,718	0/0:49,0:49:99:0,147,2324	0/0:41,0:41:99:0,123,1939	0/0:38,0:38:99:0,111,1726	0/0:32,0:32:93.30:0,93,1463	0/0:37,0:37:99:0,111,1706	0/0:52,0:52:66.15:0,66,806	0/0:39,0:39:99:0,112,730	0/0:14,0:13:35.40:0,35,273	0/0:23,0:23:39.52:0,40,447	0/0:79,0:79:99:0,181,1520	0/0:22,0:22:66.21:0,66,1027	0/0:20,0:20:57.19:0,57,911	0/0:35,0:35:99:0,105,1603	1/1:13,4:17:44.01:366,44,0	0/0:31,0:31:88.64:0,89,662	0/0:34,0:34:70.94:0,71,655	0/0:10,0:10:29.69:0,30,213
chr10	109161588	.	CCATG	C	3734.55	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.012;DP=715;FS=20.751;HRun=0;HaplotypeScore=165.2449;InbreedingCoeff=0.9908;MQ=71.58;MQ0=0;MQRankSum=-11.023;QD=33.64;ReadPosRankSum=-0.658;VQSLOD=1.9261;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.26:0,75,1886	0/0:13,0:13:30.10:0,30,781	0/0:11,0:11:33.11:0,33,771	0/0:12,0:12:16.93:0,17,586	1/1:3,13:16:18.06:312,18,0	1/1:4,10:14:27.01:422,27,0	1/1:3,23:26:60.16:1037,60,0	0/0:23,0:23:66.23:0,66,1687	1/1:5,24:29:63.22:1127,63,0	0/0:26,0:26:66.23:0,66,1624	0/0:7,0:7:14.74:0,15,392	0/0:46,0:46:99:0,135,3519	0/0:34,0:34:99:0,99,2530	0/0:32,0:32:87.30:0,87,2235	0/0:29,0:29:81.28:0,81,2084	0/0:39,0:39:99:0,105,2697	0/0:38,0:38:99:0,99,2550	0/0:40,0:40:99:0,114,2847	0/0:13,0:12:33.11:0,33,858	0/0:15,0:15:42.14:0,42,1060	0/0:66,0:66:99:0,184,4773	0/0:15,0:15:36.58:0,37,856	0/0:11,0:11:25.02:0,25,620	0/0:38,0:38:99:0,108,2675	1/1:3,23:26:48.09:837,48,0	0/0:23,0:23:66.23:0,66,1724	0/0:35,0:35:99:0,102,2582	0/0:10,0:10:30.10:0,30,769
chr10	109161788	.	CTG	C	1522.47	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-1.937;DP=602;FS=0.000;HRun=0;HaplotypeScore=137.4191;InbreedingCoeff=0.9400;MQ=70.99;MQ0=0;MQRankSum=1.687;QD=10.80;ReadPosRankSum=0.381;VQSLOD=3.4130;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:53.42:0,53,377	0/0:10,0:10:20.83:0,21,221	0/0:19,0:17:30.57:0,31,430	0/0:19,0:19:35.33:0,35,254	0/0:11,0:11:9.33:0,9,78	0/0:12,0:12:15:0,15,130	0/0:30,0:30:62.97:0,63,551	0/0:19,0:19:18.44:0,18,162	0/0:39,0:39:69:0,69,610	0/0:20,0:20:32.87:0,33,384	0/0:5,0:5:8.92:0,9,111	1/1:26,2:29:14.99:203,15,0	1/1:18,0:18:29.99:258,30,0	1/1:20,2:22:42.47:482,42,0	1/1:12,13:25:27.01:343,27,0	0/0:22,0:22:50.94:0,51,692	0/0:35,0:35:62.71:0,63,440	0/0:26,0:26:36.49:0,36,326	0/0:20,0:20:42.33:0,42,326	0/0:27,0:27:28.72:0,29,311	0/0:32,0:32:49.57:0,50,389	1/1:6,13:19:5.20:70,5,0	1/1:9,2:11:11.77:141,12,0	1/1:11,6:17:17.41:215,17,0	0/0:33,0:33:41.32:0,41,339	0/0:17,0:17:29.83:0,30,245	0/0:24,0:24:46.63:0,47,338	0/0:11,0:11:21.82:0,22,162
chr10	109161789	.	TGTG	T	928.36	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-0.202;DP=592;FS=4.565;HRun=0;HaplotypeScore=148.1454;InbreedingCoeff=0.9340;MQ=69.60;MQ0=0;MQRankSum=0.199;QD=6.73;ReadPosRankSum=-0.571;VQSLOD=2.4793;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:71.68:0,72,627	0/0:10,0:10:21.03:0,21,294	0/0:18,0:16:34.87:0,35,532	0/0:18,0:18:25.08:0,25,267	0/0:11,0:11:11.16:0,11,92	0/0:12,0:12:15.01:0,15,136	0/0:32,0:32:65.56:0,66,603	0/0:18,0:18:23.61:0,24,200	0/0:39,0:39:69.06:0,69,649	0/0:20,0:20:32.97:0,33,467	0/0:4,0:4:12.02:0,12,178	1/1:13,16:29:13.07:98,13,0	1/1:15,1:16:23.60:211,24,0	1/1:21,0:22:31.58:241,32,0	1/1:22,3:25:8.56:206,9,0	0/0:20,0:21:51.11:0,51,872	0/0:34,0:34:80.23:0,80,731	0/0:26,0:26:70.46:0,70,644	0/0:20,0:20:44.60:0,45,418	0/0:25,0:25:52.74:0,53,419	0/0:32,0:32:68.22:0,68,602	1/1:19,0:19:4.96:63,5,0	1/1:9,1:10:11.39:102,11,0	1/1:16,1:17:17.06:193,17,0	0/0:33,0:33:44.25:0,44,393	0/0:15,0:16:30.02:0,30,270	0/0:24,0:24:65.18:0,65,606	0/0:11,0:11:32.58:0,33,278
chr10	109161791	.	TG	T	2563.82	PASS	AB=0.937;AC=29;AF=0.518;AN=56;BaseQRankSum=-5.165;DP=586;FS=18.880;HRun=11;HaplotypeScore=132.3297;InbreedingCoeff=0.3049;MQ=68.23;MQ0=0;MQRankSum=6.385;QD=6.89;ReadPosRankSum=4.356;VQSLOD=0.5946;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,18:32:51.40:404,51,0	0/1:10,2:12:31.26:31,0,101	0/0:17,0:16:15.77:0,16,143	0/1:15,1:16:38.91:46,0,39	0/0:10,0:10:2.79:0,3,7	0/0:11,0:11:2.36:0,2,7	0/0:33,0:33:16.15:0,16,53	1/1:6,5:12:8.02:55,8,0	0/0:39,0:39:15.68:0,16,50	0/1:16,1:17:3.61:4,0,163	0/1:6,0:6:9.50:10,0,98	0/0:33,0:33:4.08:0,4,107	0/0:15,0:15:2.91:0,3,66	0/1:26,0:26:0.72:1,0,74	0/1:27,0:27:13.57:14,0,77	0/0:21,1:22:15.13:0,15,325	1/1:7,21:30:63.97:504,64,0	1/1:3,18:25:14.21:435,14,0	0/1:11,5:16:4.82:156,0,5	1/1:11,6:20:15.07:92,15,0	1/1:18,16:36:24.46:310,24,0	1/1:20,0:20:3.73:12,4,0	1/1:9,0:9:3.84:12,4,0	0/1:19,0:19:16.72:17,0,34	0/0:33,0:33:11.44:0,11,37	0/1:12,1:13:3.27:40,0,3	1/1:12,10:24:51.94:398,52,0	1/1:3,8:12:26.01:203,26,0
chr10	109161792	.	G	GT	1418.05	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=11.220;DP=588;FS=6.278;HRun=1;HaplotypeScore=155.5106;InbreedingCoeff=0.7806;MQ=68.65;MQ0=0;MQRankSum=-10.623;QD=11.34;ReadPosRankSum=3.639;VQSLOD=2.2428;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:62.18:0,62,393	0/0:11,0:11:20.87:0,21,209	0/0:18,0:16:24.23:0,24,344	0/1:16,0:16:29.61:30,0,130	1/1:1,7:8:8.80:70,9,0	1/1:3,5:8:14.95:123,15,0	1/1:9,19:28:56.17:486,56,0	0/0:12,0:12:15.72:0,16,112	1/1:15,22:38:68.38:541,68,0	0/0:21,0:21:35.94:0,36,362	0/0:7,0:7:14.94:0,15,150	0/0:33,0:33:31.87:0,32,208	0/0:15,0:15:31.97:0,32,247	0/0:27,0:27:49.41:0,49,312	0/0:28,0:28:35.11:0,35,195	0/0:21,0:21:49.05:0,49,534	0/0:31,0:31:79.42:0,79,512	0/0:29,0:29:76.35:0,76,493	0/0:16,0:16:0.95:0,1,224	0/0:21,0:21:47.66:0,48,366	0/0:41,0:41:70.92:0,71,489	0/0:21,0:21:4.05:0,4,17	0/0:10,0:10:10.36:0,10,55	0/0:21,0:21:19.37:0,19,101	1/1:10,17:27:44.59:340,45,0	0/0:13,0:13:29.48:0,29,219	0/0:25,0:25:64.88:0,65,426	0/0:13,0:13:32.35:0,32,206
chr10	109161793	.	G	GTGTGT	4868.25	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.884;DP=589;FS=20.571;HRun=0;HaplotypeScore=192.1701;InbreedingCoeff=0.9449;MQ=68.57;MQ0=0;MQRankSum=-11.851;QD=44.26;ReadPosRankSum=4.406;VQSLOD=3.6170;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:63.17:0,63,996	0/0:11,0:11:27.04:0,27,436	0/0:18,0:16:9.11:0,9,656	0/0:16,0:16:35.52:0,36,595	1/1:1,7:8:8.54:182,9,0	1/1:3,5:8:21.06:470,21,0	1/1:10,19:29:61.13:1404,61,0	0/0:10,0:10:18.03:0,18,207	1/1:16,21:38:87.23:1877,87,0	0/0:20,0:20:42.06:0,42,641	0/0:7,0:7:16.85:0,17,246	0/0:34,0:34:49.37:0,49,558	0/0:14,0:14:39.04:0,39,503	0/0:29,0:29:57.33:0,57,759	0/0:25,0:25:49.40:0,49,639	0/0:21,0:21:60.15:0,60,1073	0/0:31,0:31:84.23:0,84,1305	0/0:29,0:29:81.25:0,81,1280	0/0:17,0:17:44.74:0,45,685	0/0:19,0:19:48.11:0,48,690	0/0:43,0:43:78.67:0,79,1221	0/0:21,0:21:7.58:0,8,112	0/0:11,0:11:15.03:0,15,202	0/0:22,0:22:32.31:0,32,413	1/1:10,17:27:45.05:935,45,0	0/0:13,0:13:30.04:0,30,409	0/0:25,0:25:72.23:0,72,1173	0/0:13,0:13:30.08:0,30,460
chr10	109162716	.	GA	G	2742.05	PASS	AB=0.952;AC=11;AF=0.196;AN=56;BaseQRankSum=4.392;DP=711;FS=0.774;HRun=9;HaplotypeScore=87.4015;InbreedingCoeff=0.8839;MQ=81.17;MQ0=0;MQRankSum=-1.956;QD=18.91;ReadPosRankSum=0.245;VQSLOD=3.6007;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,183,2079	0/0:19,0:20:50.98:0,51,569	0/0:22,0:22:8.59:0,9,415	0/1:19,1:19:9.06:9,0,304	1/1:2,34:36:99:906,99,0	1/1:2,20:22:54.03:494,54,0	1/1:4,22:26:66.03:604,66,0	0/0:27,0:27:72.21:0,72,831	1/1:1,21:22:54.03:494,54,0	0/0:42,0:42:99:0,111,1262	0/0:28,0:28:78.22:0,78,890	0/0:23,1:24:44.72:0,45,755	0/0:25,0:25:66.18:0,66,745	0/0:31,0:31:90.26:0,90,1029	0/0:26,0:26:66.16:0,66,735	0/0:18,0:18:51.15:0,51,588	0/0:26,0:27:60.01:0,60,672	0/0:17,0:17:41.81:0,42,484	0/0:15,1:16:17.66:0,18,457	0/0:18,0:18:48.14:0,48,554	0/0:18,0:18:51.15:0,51,589	0/0:24,0:24:66.18:0,66,752	0/0:23,0:23:63.19:0,63,724	0/0:34,0:34:93.23:0,93,1058	1/1:3,16:19:45.02:412,45,0	0/0:30,0:30:84.25:0,84,965	0/0:16,0:16:42.12:0,42,485	0/0:18,0:18:51.10:0,51,557
chr10	109166646	.	GTCCACTGCCTGCCTGTA	G	900.51	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=2.039;DP=692;FS=2.550;HRun=0;HaplotypeScore=241.4991;InbreedingCoeff=0.7769;MQ=53.67;MQ0=32;MQRankSum=-2.734;QD=4.04;ReadPosRankSum=2.341;VQSLOD=2.7535;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:18:5.94:42,6,0	0/0:13,0:10:8.60:0,9,151	0/0:35,0:8:3.48:0,3,50	0/0:21,0:6:8.99:0,9,77	0/0:11,0:10:17.39:0,17,118	0/0:14,0:11:11.99:0,12,194	0/0:37,0:34:44.26:0,44,423	1/1:15,0:11:3:25,3,0	0/0:32,0:30:62.53:0,63,754	0/0:25,0:21:20.48:0,20,245	0/0:6,0:6:8.59:0,9,104	0/0:34,0:34:62.86:0,63,1129	0/0:37,0:36:65.90:0,66,1329	0/0:44,0:44:94.01:0,94,1543	0/0:40,0:40:80.75:0,81,1496	0/0:32,0:31:51.05:0,51,1032	1/1:25,0:24:15.03:242,15,0	1/1:19,0:18:11.94:91,12,0	1/1:18,5:17:12.50:209,13,0	1/1:15,0:14:0.47:1,0,0	1/1:63,0:58:12.60:163,13,0	0/0:7,0:7:8.62:0,9,153	0/0:12,0:8:3.01:0,3,50	0/0:54,0:53:77.19:0,77,1924	0/0:15,0:11:11.98:0,12,99	1/1:17,5:19:10.27:192,10,0	1/1:14,0:13:11.84:100,12,0	1/1:5,0:5:2.99:23,3,0
chr10	109167480	.	C	CTTT	1083.21	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=0.669;DP=443;FS=4.012;HRun=11;HaplotypeScore=76.5381;InbreedingCoeff=0.8991;MQ=64.00;MQ0=4;MQRankSum=1.118;QD=18.36;ReadPosRankSum=1.208;VQSLOD=2.0992;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:41.87:0,42,444	0/0:8,0:8:15.04:0,15,175	0/0:10,0:9:5.95:0,6,60	0/0:12,0:7:7.50:0,7,61	1/1:4,9:12:17.98:267,18,0	1/1:1,13:13:15.05:282,15,0	1/1:3,4:7:12.02:192,12,0	0/0:37,0:37:84.13:0,84,977	1/1:2,9:11:9.03:169,9,0	0/0:16,0:16:45.10:0,45,519	0/0:15,0:15:23.83:0,24,258	0/0:14,0:14:21:0,21,239	0/0:14,0:14:32.29:0,32,358	0/0:8,0:8:14.98:0,15,164	0/0:19,0:19:41.88:0,42,453	0/0:18,0:17:42.08:0,42,485	0/0:31,0:30:75.09:0,75,841	0/0:28,0:27:63.10:0,63,706	0/0:24,0:24:47.94:0,48,537	0/0:19,0:19:41.92:0,42,491	0/0:6,0:6:18.05:0,18,210	0/0:3,0:3:9.03:0,9,105	0/0:9,0:9:11.83:0,12,140	0/0:13,0:13:27.07:0,27,315	1/1:1,11:10:18.06:338,18,0	0/0:15,0:16:32.87:0,33,368	0/0:14,0:14:23.84:0,24,253	0/0:24,0:23:63.15:0,63,736
chr10	109167650	.	TTTTTTTTTTGTTG	T	754.36	PASS	AB=0.981;AC=9;AF=0.173;AN=52;BaseQRankSum=-2.425;DP=424;FS=14.580;HRun=0;HaplotypeScore=98.9773;InbreedingCoeff=0.5298;MQ=26.13;MQ0=102;MQRankSum=-0.254;QD=9.93;ReadPosRankSum=-4.765;VQSLOD=-0.7458;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:13:24.01:0,24,460	0/0:7,0:4:9.03:0,9,295	./.	./.	0/0:19,0:19:36.08:0,36,753	0/0:19,0:12:23.81:0,24,533	0/0:18,0:9:0.13:0,0,599	0/0:32,0:16:39.60:0,40,979	0/0:7,0:2:5.51:0,6,142	0/0:13,0:11:32.32:0,32,664	0/0:19,0:15:29.76:0,30,556	1/1:14,1:13:16.82:192,17,0	1/1:11,0:7:11.14:151,11,0	0/1:14,0:12:13.54:176,0,14	0/1:16,1:12:1.24:214,0,1	0/0:11,0:7:15.02:0,15,246	0/0:18,0:13:21.07:0,21,750	0/0:15,0:10:12.02:0,12,320	0/0:20,0:10:27.09:0,27,640	0/0:13,0:11:21.07:0,21,484	0/0:12,0:7:7.27:0,7,158	1/1:6,1:4:5.09:30,5,0	0/0:8,3:6:2.51:0,3,7	0/1:12,0:11:5.37:134,0,5	0/0:15,0:10:21.03:0,21,347	0/0:21,0:15:39.09:0,39,944	0/0:11,0:8:15.05:0,15,346	0/0:25,0:12:17.58:0,18,270
chr10	109168195	.	C	CT	797.81	PASS	AB=0.978;AC=22;AF=0.393;AN=56;BaseQRankSum=8.213;DP=352;FS=4.416;HRun=1;HaplotypeScore=57.2045;InbreedingCoeff=-0.2090;MQ=49.50;MQ0=39;MQRankSum=-3.051;QD=3.45;ReadPosRankSum=1.557;VQSLOD=0.3068;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:9:2.53:0,3,215	0/0:8,0:8:24.06:0,24,297	0/0:56,0:6:12.04:0,12,156	0/1:55,0:10:8.06:8,0,113	1/1:7,0:7:11.74:70,12,0	0/1:3,0:2:10.90:11,0,14	0/1:8,0:6:8.47:42,0,8	0/0:16,0:14:42.14:0,42,544	0/0:6,0:6:5.92:0,6,39	0/0:8,0:8:21.07:0,21,272	0/0:4,0:4:5.79:0,6,78	0/1:11,0:11:21:99,0,21	0/1:5,0:5:30.26:45,0,30	0/1:12,0:12:24.08:83,0,24	1/1:14,1:14:24.34:210,24,0	0/1:11,0:10:26.03:26,0,157	0/1:14,2:14:93.82:94,0,191	0/1:8,0:8:2.42:2,0,163	0/1:6,0:5:11.81:12,0,105	0/0:8,0:7:11.81:0,12,156	0/1:19,1:21:5.99:6,0,367	0/1:8,0:8:10.08:10,0,44	0/1:7,0:7:27.11:44,0,27	0/1:17,0:17:15.60:107,0,16	1/1:6,0:5:4.86:50,5,0	0/0:5,0:4:12.04:0,12,156	0/1:6,2:8:26.86:27,0,177	0/1:7,0:7:16.53:17,0,162
chr10	109168196	.	T	TC	2015.33	PASS	AB=0.834;AC=25;AF=0.446;AN=56;BaseQRankSum=7.995;DP=343;FS=4.182;HRun=1;HaplotypeScore=52.4162;InbreedingCoeff=-0.1034;MQ=47.46;MQ0=38;MQRankSum=-3.635;QD=9.29;ReadPosRankSum=-1.176;VQSLOD=0.7543;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:9:14.32:14,0,213	0/0:8,0:8:21.07:0,21,272	0/0:56,0:5:12.03:0,12,144	0/1:52,0:8:24.79:25,0,97	1/1:1,6:7:17.97:214,18,0	1/1:2,1:2:5.98:64,6,0	1/1:3,5:6:11.71:157,12,0	0/0:16,0:15:42.11:0,42,519	0/1:2,4:6:7.76:15,0,8	0/0:8,0:8:21.07:0,21,272	0/0:4,0:4:6.02:0,6,78	0/1:2,9:11:20.85:201,0,21	0/1:3,2:5:21.18:102,0,21	0/1:3,7:10:23.90:159,0,24	1/1:6,8:13:13.71:368,14,0	0/1:7,3:9:71.73:72,0,138	0/1:15,0:13:74.52:75,0,171	0/1:8,0:8:27.36:27,0,141	0/1:6,0:5:32.81:33,0,104	0/0:8,0:7:12.04:0,12,156	0/0:19,1:20:6.99:0,7,338	0/1:6,2:8:7.65:35,0,8	0/1:5,1:6:25.96:120,0,26	0/1:8,10:18:12.25:300,0,12	1/1:1,5:5:12.25:144,12,0	0/0:6,0:5:12.04:0,12,156	0/1:6,0:6:5.91:6,0,177	0/1:7,0:7:59.74:60,0,145
chr10	109168234	.	GTCCCTCTC	G	956.78	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=-0.748;DP=337;FS=17.975;HRun=0;HaplotypeScore=75.5952;InbreedingCoeff=0.5561;MQ=51.43;MQ0=30;MQRankSum=1.042;QD=6.88;ReadPosRankSum=-0.427;VQSLOD=-0.0049;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:9:11.96:141,12,0	0/0:4,0:4:9.03:0,9,200	0/0:46,0:4:2.46:0,2,51	0/1:49,0:7:3.59:4,0,69	0/0:11,0:11:2.81:0,3,21	0/0:10,0:10:3.75:0,4,24	0/0:16,0:16:0.53:0,1,2	1/1:9,8:13:18.01:194,18,0	0/0:6,0:6:5.94:0,6,43	0/0:10,0:9:17.23:0,17,253	0/0:9,0:9:18.05:0,18,263	0/0:9,0:8:12.03:0,12,199	0/0:13,0:11:20.51:0,21,323	0/0:9,0:7:18.06:0,18,294	0/0:8,0:6:3:0,3,26	0/0:7,0:7:9.03:0,9,136	0/1:14,0:11:31.23:59,0,31	1/1:6,0:6:8.98:103,9,0	1/1:8,0:4:2.93:53,3,0	1/1:3,0:3:9.03:145,9,0	1/1:18,0:15:11.97:162,12,0	0/0:11,0:11:6.02:0,6,100	0/0:5,0:5:5.47:0,5,99	0/0:18,0:18:33.31:0,33,392	0/0:6,0:6:1.25:0,1,3	1/1:2,0:2:6.02:89,6,0	1/1:7,0:4:6.36:62,6,0	1/1:4,0:4:6.02:122,6,0
chr10	109168288	.	CTCT	C	6032.83	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-6.146;DP=670;FS=2.726;HRun=0;HaplotypeScore=143.7444;InbreedingCoeff=0.9968;MQ=71.00;MQ0=15;MQRankSum=-1.077;QD=40.49;ReadPosRankSum=4.547;VQSLOD=6.2089;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:87.30:0,87,1878	0/0:11,0:11:33.11:0,33,721	0/0:53,0:27:51.38:0,51,873	0/0:87,0:45:39.28:0,39,918	0/0:22,0:22:66.18:0,66,1362	0/0:15,0:15:39.10:0,39,807	0/0:30,0:30:84.24:0,84,1680	0/0:24,0:23:60.21:0,60,1263	0/0:15,0:15:45.15:0,45,973	0/0:27,0:27:69.23:0,69,1468	0/0:15,0:15:45.15:0,45,957	1/1:0,16:16:42.14:666,42,0	1/1:0,20:20:54.18:856,54,0	1/1:1,23:24:57.19:904,57,0	1/1:1,22:23:66.22:1043,66,0	0/0:14,0:14:42.14:0,42,917	0/0:24,0:24:66.23:0,66,1442	0/0:18,0:18:27.71:0,28,922	0/0:20,0:20:54.18:0,54,1123	0/0:23,0:23:63.22:0,63,1338	0/0:22,0:21:51.16:0,51,1047	1/1:2,15:17:41.74:665,42,0	1/1:1,13:14:36.12:567,36,0	1/1:2,33:35:84.28:1331,84,0	0/0:14,0:14:39.13:0,39,853	0/0:19,0:19:57.20:0,57,1235	0/0:15,0:15:39.13:0,39,832	0/0:11,0:11:15.05:0,15,302
chr10	109168319	.	AC	A	6441.09	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-3.036;DP=669;FS=1.028;HRun=5;HaplotypeScore=114.3284;InbreedingCoeff=0.9953;MQ=80.00;MQ0=2;MQRankSum=-0.022;QD=28.25;ReadPosRankSum=1.594;VQSLOD=4.1117;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,39:46:84.19:936,84,0	0/0:10,0:10:30.10:0,30,410	0/0:37,0:32:54.72:0,55,713	0/0:44,1:33:44.58:0,45,593	0/0:23,0:23:66.22:0,66,900	0/0:20,0:20:60.18:0,60,789	0/0:25,0:25:75.21:0,75,1004	1/1:2,17:19:50.99:523,51,0	0/0:20,0:20:51.11:0,51,660	0/0:18,0:18:54.17:0,54,723	0/0:16,0:16:45.13:0,45,593	0/0:23,0:23:63.14:0,63,846	0/0:25,0:25:72.13:0,72,883	0/0:31,0:31:75.25:0,75,1018	0/0:31,0:31:90.30:0,90,1229	0/0:15,0:15:45.12:0,45,581	1/1:1,30:31:84.24:952,84,0	1/1:1,20:21:54.15:612,54,0	1/1:0,18:18:54.14:603,54,0	1/1:0,24:24:72.17:802,72,0	1/1:3,19:22:42.10:476,42,0	0/0:20,0:20:54.08:0,54,695	0/0:17,0:17:51.12:0,51,656	0/0:43,0:43:99:0,108,1433	0/0:21,0:21:63.20:0,63,847	1/1:0,26:26:78.17:859,78,0	1/1:0,17:17:48.14:543,48,0	1/1:0,4:4:12.03:136,12,0
chr10	109171089	.	AAAAAAAAG	A	3542.76	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.646;DP=545;FS=0.540;HRun=0;HaplotypeScore=112.9411;InbreedingCoeff=0.9146;MQ=69.65;MQ0=4;MQRankSum=-8.844;QD=38.51;ReadPosRankSum=8.777;VQSLOD=2.2215;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:13.07:0,13,608	0/0:7,0:7:21.07:0,21,526	0/0:31,0:11:6.09:0,6,209	0/0:25,0:15:6.40:0,6,177	1/1:7,10:17:20.30:448,20,0	1/1:2,29:31:59.96:1394,60,0	1/1:0,11:11:15.05:343,15,0	0/0:31,0:31:58.81:0,59,1402	1/1:3,10:13:18.35:380,18,0	0/0:22,0:21:63.21:0,63,1676	0/0:26,0:26:74.91:0,75,1823	0/0:19,0:19:30.05:0,30,705	0/0:23,0:23:27.08:0,27,769	0/0:18,0:18:44.50:0,45,1045	0/0:15,0:15:21.06:0,21,522	0/0:19,0:19:57.17:0,57,1332	0/0:26,0:26:33.58:0,34,1074	0/0:29,0:29:27.08:0,27,753	0/0:33,0:32:90.27:0,90,2183	0/0:15,0:15:33.10:0,33,868	0/0:8,0:8:6.01:0,6,141	0/0:10,0:10:27.08:0,27,613	0/0:9,0:9:26.42:0,26,588	0/0:9,0:9:21.07:0,21,591	1/1:0,20:20:42.14:978,42,0	0/0:22,0:22:60.17:0,60,1693	0/0:11,0:11:30.97:0,31,852	0/0:17,0:16:18.04:0,18,358
chr10	109171455	.	TTTC	T	959.80	PASS	AB=1.000;AC=13;AF=0.342;AN=38;BaseQRankSum=0.978;DP=286;FS=1.020;HRun=0;HaplotypeScore=70.3524;InbreedingCoeff=0.8036;MQ=91.35;MQ0=7;MQRankSum=-1.316;QD=9.60;ReadPosRankSum=0.345;VQSLOD=3.0792;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:5,0:5:5.99:0,6,53	0/0:27,0:14:17.86:0,18,141	0/0:23,0:19:19.41:0,19,200	0/0:23,0:23:44.45:0,44,554	0/0:16,0:15:41.94:0,42,455	0/0:11,0:11:14.97:0,15,158	./.	0/0:10,0:10:12:0,12,210	0/0:14,0:14:35.23:0,35,381	0/0:19,0:19:47.56:0,48,441	1/1:11,0:11:6.02:71,6,0	1/1:14,1:15:24.04:263,24,0	1/1:14,1:15:9.03:107,9,0	0/1:12,0:12:0.01:0,0,0	0/0:11,0:11:14.89:0,15,138	./.	0/0:2,0:1:2.37:0,2,8	./.	./.	./.	1/1:14,0:14:30:293,30,0	1/1:3,10:13:2.91:40,3,0	1/1:19,1:18:26.53:333,27,0	0/0:21,0:21:17.93:0,18,209	./.	./.	./.
chr10	109171464	.	CTTCT	C	1024.29	PASS	AB=0.794;AC=14;AF=0.280;AN=50;BaseQRankSum=0.611;DP=332;FS=1.737;HRun=0;HaplotypeScore=67.9592;InbreedingCoeff=0.5405;MQ=70.09;MQ0=12;MQRankSum=-0.418;QD=9.94;ReadPosRankSum=1.177;VQSLOD=1.8971;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:3,0:2:0:0,0,0	0/0:4,0:4:8.94:0,9,83	0/0:23,0:9:17.86:0,18,141	0/0:17,0:13:20.71:0,21,202	0/0:31,0:30:54.67:0,55,724	0/0:24,0:21:56.55:0,57,595	0/0:13,0:13:25.11:0,25,221	0/1:2,0:2:0.04:0,0,0	0/0:13,0:13:19.80:0,20,304	0/0:17,0:17:39.51:0,40,472	0/0:25,0:25:48.36:0,48,525	0/1:5,10:13:13.81:80,0,14	1/1:14,0:15:5.62:288,6,0	0/1:4,10:15:5.90:120,0,6	0/0:10,7:17:1.35:0,1,4	0/0:10,0:10:17.49:0,17,184	0/0:4,0:2:1.25:0,1,3	0/0:4,0:2:2.51:0,3,8	0/0:4,0:4:6.03:0,6,16	0/0:3,0:2:1.55:0,2,4	./.	1/1:12,0:14:14.45:316,14,0	1/1:13,0:14:5.38:59,5,0	1/1:20,1:18:13.07:299,13,0	0/0:18,0:18:17.98:0,18,257	1/1:3,0:3:0.86:2,1,0	./.	./.
chr10	109174075	.	A	AAAAAC	2101.60	PASS	AB=0.956;AC=19;AF=0.339;AN=56;BaseQRankSum=7.079;DP=561;FS=62.540;HRun=0;HaplotypeScore=138.9675;InbreedingCoeff=0.4239;MQ=40.96;MQ0=44;MQRankSum=-7.270;QD=7.87;ReadPosRankSum=-2.646;VQSLOD=-0.0459;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:41.18:0,41,396	0/0:11,0:11:8.71:0,9,95	0/1:46,0:6:9.19:9,0,23	0/0:35,0:5:7.05:0,7,34	0/1:12,0:12:14.71:88,0,15	1/1:12,0:10:6.90:169,7,0	1/1:23,0:21:45.10:470,45,0	0/0:19,0:18:30.76:0,31,246	0/1:12,0:12:27.96:144,0,28	0/0:18,0:17:28.12:0,28,355	0/0:15,0:15:25.19:0,25,187	0/1:16,9:26:0.91:125,0,1	0/1:22,0:22:39.70:91,0,40	1/1:23,0:23:16.16:283,16,0	0/1:20,0:20:0.07:249,0,0	0/0:15,0:15:25.78:0,26,315	0/0:36,0:35:26.61:0,27,226	0/0:12,0:10:20.58:0,21,195	0/0:27,0:16:21.52:0,22,261	0/0:15,0:15:29.95:0,30,311	0/0:14,0:12:11.71:0,12,106	1/1:20,0:18:5.14:277,5,0	1/1:15,0:13:2.45:235,2,0	1/1:19,0:17:9.03:60,9,0	0/1:15,0:13:59.31:79,0,59	0/0:25,0:21:44.66:0,45,425	0/0:15,0:14:17.37:0,17,188	0/0:9,0:8:8.84:0,9,84
chr10	109174077	.	A	ACAC	1515.01	PASS	AB=0.847;AC=10;AF=0.179;AN=56;BaseQRankSum=-1.589;DP=543;FS=12.973;HRun=0;HaplotypeScore=118.5189;InbreedingCoeff=0.0076;MQ=42.51;MQ0=42;MQRankSum=-1.789;QD=7.28;ReadPosRankSum=2.328;VQSLOD=2.2719;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:39.55:0,40,469	0/0:11,0:11:11.97:0,12,156	0/1:48,0:7:25.67:26,0,48	0/0:36,0:6:5.50:0,6,40	0/0:12,0:12:28.22:0,28,206	0/0:11,0:10:18.76:0,19,149	0/0:23,0:21:38.37:0,38,206	0/0:18,0:17:1.50:0,2,344	0/0:12,0:12:24.44:0,24,217	0/0:18,0:17:36.47:0,36,489	0/0:15,0:15:32.74:0,33,353	0/1:25,0:25:49.73:50,0,56	0/1:15,8:23:78.46:78,0,125	1/1:19,1:21:30.04:449,30,0	0/1:12,6:21:45.23:293,0,45	0/0:12,0:12:30.05:0,30,430	0/0:32,0:32:13.35:0,13,311	0/1:12,0:10:23.99:24,0,139	0/0:25,0:14:14.15:0,14,213	0/0:15,0:15:36.09:0,36,445	0/0:16,0:14:21.01:0,21,248	0/1:9,11:20:32.64:366,0,33	0/1:12,1:13:25.37:285,0,25	0/1:18,0:18:8.71:94,0,9	0/0:15,0:13:29.76:0,30,277	0/0:22,0:18:25.27:0,25,428	0/0:13,0:12:23.97:0,24,304	0/0:5,0:5:9.03:0,9,114
chr10	109174373	.	C	CT	6764.87	PASS	AB=0.733;AC=54;AF=0.964;AN=56;BaseQRankSum=2.342;DP=391;FS=5.067;HRun=0;HaplotypeScore=222.0136;InbreedingCoeff=-0.0434;MQ=59.02;MQ0=0;MQRankSum=-3.087;QD=17.30;ReadPosRankSum=2.493;VQSLOD=5.1428;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:48.02:301,48,0	1/1:0,3:3:8.82:53,9,0	0/1:4,4:8:25.62:171,0,26	0/1:6,2:8:68.61:84,0,69	1/1:1,8:9:14.43:90,14,0	1/1:1,13:14:40.10:243,40,0	1/1:0,19:19:55.69:325,56,0	1/1:1,27:28:68.97:591,69,0	1/1:0,16:16:44.82:256,45,0	1/1:1,10:11:29.84:239,30,0	1/1:0,8:8:20.11:102,20,0	1/1:0,22:22:61.48:355,61,0	1/1:1,17:18:43.50:290,43,0	1/1:0,23:23:66.14:369,66,0	1/1:0,20:20:58.32:328,58,0	1/1:1,26:27:79.43:507,79,0	1/1:0,12:12:29.43:183,29,0	1/1:0,13:13:38.90:348,39,0	1/1:0,11:11:32.68:273,33,0	1/1:0,12:12:35.31:214,35,0	1/1:1,6:7:17.74:114,18,0	1/1:0,8:8:20.48:117,20,0	1/1:0,7:8:20.28:109,20,0	1/1:1,13:14:26.19:146,26,0	1/1:0,6:6:17.39:95,17,0	1/1:1,13:14:39.86:304,40,0	1/1:2,23:25:70.90:493,71,0	1/1:0,3:3:8.93:63,9,0
chr10	109174375	.	AG	A	3077.96	PASS	AB=1.000;AC=54;AF=0.964;AN=56;BaseQRankSum=1.400;DP=382;FS=0.000;HRun=3;HaplotypeScore=232.9705;InbreedingCoeff=0.0649;MQ=59.35;MQ0=0;MQRankSum=-3.416;QD=8.06;ReadPosRankSum=2.248;VQSLOD=0.8640;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:43.26:164,43,0	1/1:0,3:3:6.63:21,7,0	0/1:9,0:9:17.48:17,0,45	0/1:7,0:7:8.01:8,0,91	1/1:1,8:9:8.70:50,9,0	1/1:0,13:13:23.55:82,24,0	1/1:0,19:19:44.64:191,45,0	1/1:0,27:27:61.80:330,62,0	1/1:0,16:16:25.68:100,26,0	1/1:0,10:10:27.12:133,27,0	1/1:0,8:8:12.13:43,12,0	1/1:0,22:22:45.95:170,46,0	1/1:1,17:18:15.80:83,16,0	1/1:0,23:23:43.40:176,43,0	1/1:0,20:20:40.14:131,40,0	1/1:1,26:27:58.56:210,59,0	1/1:1,11:12:23.97:93,24,0	1/1:2,11:13:30.25:143,30,0	1/1:0,11:11:31.80:192,32,0	1/1:0,12:12:27.47:99,27,0	1/1:0,6:6:15.30:72,15,0	1/1:0,8:8:16.22:71,16,0	1/1:1,7:8:16.23:76,16,0	1/1:0,13:13:19.13:75,19,0	1/1:0,6:6:11.69:45,12,0	1/1:1,13:14:30.58:162,31,0	1/1:1,23:24:54.69:215,55,0	1/1:0,3:3:7.84:31,8,0
chr10	109174620	.	TATTG	T	5824.80	PASS	AB=0.917;AC=49;AF=0.875;AN=56;BaseQRankSum=-6.968;DP=361;FS=2.540;HRun=0;HaplotypeScore=69.9783;InbreedingCoeff=0.2819;MQ=57.35;MQ0=9;MQRankSum=-1.042;QD=20.30;ReadPosRankSum=-1.302;VQSLOD=4.4174;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,2:20:34.97:400,35,0	1/1:6,0:6:2.87:81,3,0	0/0:39,1:14:32.91:0,33,291	0/0:34,0:14:4.69:0,5,131	1/1:4,9:11:9.03:124,9,0	0/1:2,1:3:32.59:62,0,33	1/1:13,0:12:35.80:393,36,0	1/1:27,0:26:51.99:615,52,0	1/1:4,0:4:4.83:45,5,0	1/1:11,0:10:20.72:176,21,0	1/1:17,0:18:41.07:332,41,0	1/1:11,0:10:10.26:55,10,0	1/1:10,0:9:12.94:57,13,0	1/1:11,0:11:4.08:54,4,0	1/1:9,0:9:14.77:166,15,0	0/1:6,0:6:21.99:46,0,22	1/1:13,0:13:38.66:523,39,0	1/1:9,0:8:18.30:207,18,0	1/1:1,18:23:62.92:875,63,0	1/1:1,10:12:5.88:55,6,0	1/1:7,0:7:15.76:176,16,0	1/1:1,0:1:3:28,3,0	0/1:9,0:9:21.75:129,0,22	1/1:8,0:8:7.99:55,8,0	1/1:0,7:7:6.02:76,6,0	1/1:0,17:17:45.01:600,45,0	1/1:9,0:10:27.05:328,27,0	1/1:5,1:5:15.01:167,15,0
chr10	109174623	.	TG	T	3395.58	PASS	AB=1.000;AC=48;AF=0.889;AN=54;BaseQRankSum=-5.441;DP=362;FS=0.846;HRun=1;HaplotypeScore=66.3290;InbreedingCoeff=0.4360;MQ=56.64;MQ0=15;MQRankSum=-1.187;QD=11.79;ReadPosRankSum=-0.404;VQSLOD=1.6903;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,3:19:30.30:247,30,0	1/1:5,0:5:9.43:51,9,0	0/0:40,0:14:31.57:0,32,186	0/0:34,0:14:13.65:0,14,70	1/1:13,0:11:8.92:62,9,0	0/1:6,0:6:23.84:24,0,24	1/1:15,0:14:35.12:224,35,0	1/1:26,0:24:54.02:392,54,0	1/1:5,0:5:6.78:38,7,0	1/1:12,0:11:24.55:172,25,0	1/1:18,0:18:41.29:272,41,0	1/1:8,0:8:9.25:21,9,0	1/1:10,0:9:16.08:88,16,0	1/1:14,0:13:3.83:19,4,0	1/1:5,0:5:10.20:71,10,0	1/1:6,0:6:10.07:58,10,0	1/1:14,0:13:37.70:258,38,0	1/1:9,0:8:17.95:144,18,0	1/1:19,4:23:59.08:438,59,0	1/1:12,0:12:5.77:33,6,0	1/1:7,0:7:15.32:107,15,0	./.	0/1:7,0:7:17.25:46,0,17	1/1:13,0:9:8.35:43,8,0	1/1:7,0:7:5.91:38,6,0	1/1:18,0:17:41.67:306,42,0	1/1:9,0:9:23.83:175,24,0	1/1:4,0:3:8.94:66,9,0
chr10	109177071	.	CGTGT	C	1517.11	PASS	AB=0.892;AC=15;AF=0.278;AN=54;BaseQRankSum=4.689;DP=590;FS=3.069;HRun=0;HaplotypeScore=122.9214;InbreedingCoeff=0.4620;MQ=65.56;MQ0=5;MQRankSum=-1.053;QD=7.19;ReadPosRankSum=1.612;VQSLOD=2.8352;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:42.14:0,42,1007	0/0:12,0:15:26.83:0,27,547	./.	0/0:18,0:10:3.01:0,3,36	1/1:8,5:14:15.04:219,15,0	1/1:7,12:22:26.56:494,27,0	1/1:15,5:20:15.52:240,16,0	0/0:24,0:27:23.55:0,24,456	1/1:7,10:19:30.09:439,30,0	0/1:18,1:22:12.43:12,0,562	0/0:7,0:8:3.01:0,3,72	0/0:25,0:28:11.30:0,11,165	0/0:20,0:29:26.79:0,27,404	0/0:17,0:23:18.20:0,18,326	0/0:14,0:22:12.02:0,12,209	0/1:18,2:20:11.76:12,0,726	0/0:29,1:35:26.25:0,26,1369	0/1:16,0:18:5.89:6,0,302	0/0:20,0:20:13.86:0,14,292	0/0:11,0:11:18.06:0,18,416	0/1:29,1:32:9.30:9,0,690	0/0:15,0:19:5.93:0,6,104	0/0:8,0:8:6.02:0,6,99	0/0:19,0:26:14.94:0,15,253	1/1:14,5:19:12.04:192,12,0	0/1:21,2:24:68.92:69,0,391	0/0:20,0:19:45.15:0,45,1042	0/0:12,0:13:26.83:0,27,583
chr10	109178650	.	T	TAC	849.71	PASS	AB=1.000;AC=32;AF=0.762;AN=42;BaseQRankSum=-0.152;DP=739;FS=1.820;HRun=0;HaplotypeScore=175.8236;InbreedingCoeff=0.2835;MQ=66.52;MQ0=8;MQRankSum=-1.045;QD=1.79;ReadPosRankSum=-0.700;VQSLOD=2.4558;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:54,0:54:8.87:71,9,0	./.	./.	./.	./.	1/1:20,0:20:8.58:70,9,0	1/1:24,0:23:2.49:9,2,0	1/1:48,0:48:9.30:28,9,0	1/1:19,0:18:6.02:82,6,0	1/1:12,0:12:0.42:26,0,0	1/1:11,0:11:5.99:49,6,0	./.	0/0:20,0:21:0.97:0,1,7	0/1:15,0:17:0.11:0,0,0	./.	0/0:17,0:17:5.94:0,6,49	0/1:37,0:37:6.29:6,0,14	1/1:23,1:24:8.76:80,9,0	1/1:21,0:21:9.06:48,9,0	1/1:26,0:26:2.95:24,3,0	1/1:48,0:45:20.86:170,21,0	0/1:18,0:20:0:0,0,0	./.	0/0:47,0:48:2.84:0,3,14	1/1:17,0:16:3:25,3,0	1/1:32,6:38:22.17:178,22,0	0/1:25,0:25:19.79:51,0,20	1/1:12,0:12:5.50:45,6,0
chr10	109179426	.	GTTGTTGTT	G	5167.10	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=-0.715;DP=802;FS=4.927;HRun=0;HaplotypeScore=209.2679;InbreedingCoeff=0.4788;MQ=67.77;MQ0=4;MQRankSum=-5.672;QD=16.72;ReadPosRankSum=-2.297;VQSLOD=3.7880;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:42.63:0,43,408	0/0:15,0:15:45.15:0,45,1422	0/0:42,0:34:61.55:0,62,1044	0/0:40,0:16:42.03:0,42,630	1/1:1,31:32:87.23:1705,87,0	1/1:1,19:20:23.83:658,24,0	1/1:6,22:28:12.04:325,12,0	0/1:31,0:31:99:100,0,507	1/1:2,26:28:48.16:1321,48,0	0/0:31,0:31:90.31:0,90,3048	0/0:12,0:12:33.11:0,33,1265	0/0:33,0:33:32.01:0,32,170	0/0:25,0:25:32.13:0,32,260	0/0:39,0:39:53.70:0,54,604	0/0:41,0:40:43.02:0,43,271	0/0:28,0:28:72.21:0,72,2454	0/0:35,0:35:45.85:0,46,488	0/0:25,0:25:19.92:0,20,265	0/1:24,0:24:27:27,0,409	0/1:29,0:29:99:146,0,338	0/0:32,0:32:36.40:0,36,409	0/1:19,0:19:43.40:43,0,295	0/0:26,0:26:27.95:0,28,177	0/1:31,0:31:6.01:6,0,282	1/1:0,26:26:27.09:706,27,0	0/1:41,0:41:99:129,0,494	0/0:22,0:22:15.35:0,15,129	0/0:12,0:12:28.61:0,29,443
chr10	109179429	.	GTTGTT	G	14069.31	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=10.594;DP=772;FS=15.165;HRun=0;HaplotypeScore=137.0379;InbreedingCoeff=0.9485;MQ=62.50;MQ0=4;MQRankSum=-0.872;QD=23.29;ReadPosRankSum=2.973;VQSLOD=3.9789;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,27:34:45.15:860,45,0	0/0:15,0:15:33.10:0,33,788	0/0:39,0:27:26.22:0,26,305	0/0:40,0:15:11.97:0,12,160	1/1:31,0:31:84.13:1077,84,0	1/1:20,0:20:23.93:319,24,0	1/1:23,0:23:12.51:152,13,0	1/1:9,17:26:51.12:653,51,0	1/1:27,0:27:48.16:627,48,0	0/0:35,0:35:93.29:0,93,1960	0/0:12,0:12:27.09:0,27,778	1/1:3,30:33:45.15:860,45,0	1/1:7,17:24:33.11:631,33,0	1/1:16,21:37:36.12:688,36,0	1/1:5,34:39:54.02:1032,54,0	0/0:27,0:27:66.23:0,66,1556	1/1:9,26:35:42.14:802,42,0	1/1:6,19:25:20.28:351,20,0	1/1:10,13:23:36.56:467,37,0	1/1:6,23:29:66.21:1067,66,0	1/1:9,21:30:21.07:377,21,0	1/1:2,17:19:44.98:645,45,0	1/1:4,22:26:35.30:686,35,0	1/1:6,25:31:22.29:602,22,0	1/1:26,0:26:27.09:359,27,0	1/1:8,29:37:87.24:1414,87,0	1/1:2,15:17:18.06:344,18,0	1/1:9,3:12:3.01:57,3,0
chr10	109181003	.	G	GT	4329.65	PASS	AB=0.747;AC=24;AF=0.429;AN=56;BaseQRankSum=0.055;DP=605;FS=12.641;HRun=10;HaplotypeScore=127.0625;InbreedingCoeff=0.5508;MQ=57.77;MQ0=2;MQRankSum=-4.897;QD=13.45;ReadPosRankSum=-2.210;VQSLOD=2.9092;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,14:29:47.92:446,48,0	0/0:6,0:6:8.98:0,9,74	0/0:17,0:11:11.87:0,12,88	0/0:18,0:6:8.12:0,8,74	1/1:17,6:23:0.62:152,1,0	0/1:9,5:14:3.18:151,0,3	0/1:13,6:17:3.72:156,0,4	1/1:15,16:32:10.49:469,10,0	0/1:12,4:15:3.63:158,0,4	0/0:24,0:24:47.83:0,48,394	0/0:15,0:15:1.11:0,1,125	0/0:19,0:19:26.64:0,27,221	0/0:29,0:29:36.63:0,37,305	0/0:38,0:39:43.68:0,44,350	0/0:29,0:28:15.18:0,15,244	0/0:22,0:24:28.52:0,29,213	0/1:6,5:11:7.79:142,0,8	1/1:5,10:15:30.04:308,30,0	0/1:14,2:16:21.44:157,0,21	1/1:16,16:31:47.89:445,48,0	0/1:5,9:13:12.59:84,0,13	0/0:20,0:20:16.54:0,17,144	0/0:21,0:21:23.92:0,24,197	0/0:22,0:21:29.73:0,30,246	1/1:13,17:28:44.92:428,45,0	1/1:16,16:29:32.29:508,32,0	1/1:11,13:23:20.43:397,20,0	1/1:3,10:12:32.67:329,33,0
chr10	109181042	.	T	TGG	252.41	PASS	AB=0.937;AC=8;AF=0.148;AN=54;BaseQRankSum=-0.750;DP=580;FS=22.715;HRun=0;HaplotypeScore=120.9412;InbreedingCoeff=0.0878;MQ=35.14;MQ0=57;MQRankSum=-2.831;QD=1.96;ReadPosRankSum=-2.044;VQSLOD=0.5435;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:24:27.41:0,27,259	0/0:3,0:3:9.03:0,9,122	./.	0/0:18,0:3:3.01:0,3,49	0/0:27,0:25:46.41:0,46,483	0/0:16,0:15:32.08:0,32,330	0/0:18,0:12:22.23:0,22,200	0/1:19,1:18:79.72:80,0,247	0/0:15,0:14:26.46:0,26,271	0/0:29,0:25:69.14:0,69,828	0/0:22,0:20:45.13:0,45,598	0/0:20,0:18:32.51:0,33,268	0/0:22,0:21:50.90:0,51,520	0/0:30,0:28:48.09:0,48,415	0/0:28,0:25:40.55:0,41,382	0/0:20,0:20:54.15:0,54,686	0/1:16,1:15:2.27:2,0,136	1/1:17,2:10:6.73:69,7,0	0/0:14,0:11:14.60:0,15,260	0/0:30,0:25:9.95:0,10,344	0/1:9,1:4:24.95:25,0,67	0/0:24,0:24:41.20:0,41,382	0/0:21,0:20:44.42:0,44,476	0/0:21,0:17:22.25:0,22,212	0/0:31,0:26:58.86:0,59,592	0/1:27,4:25:99:185,0,144	0/1:13,1:13:2.64:3,0,171	0/1:18,0:16:11.61:12,0,259
chr10	109181253	.	GGATCCACTGCAC	G	6960.01	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.125;DP=665;FS=3.825;HRun=0;HaplotypeScore=225.0091;InbreedingCoeff=0.9935;MQ=72.80;MQ0=0;MQRankSum=-11.964;QD=82.86;ReadPosRankSum=1.948;VQSLOD=4.3391;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,6105	0/0:6,0:6:18.06:0,18,1118	0/0:16,0:16:45.62:0,46,2243	0/0:12,0:12:30.10:0,30,1544	1/1:0,11:12:14.81:512,15,0	1/1:0,17:17:36.12:1425,36,0	1/1:0,18:18:42.14:1662,42,0	0/0:23,0:23:66.23:0,66,3730	1/1:0,21:21:48.16:1834,48,0	0/0:27,0:27:81.28:0,81,4931	0/0:13,0:13:36.12:0,36,2213	0/0:29,0:29:78.27:0,78,4821	0/0:32,0:32:93.32:0,93,5623	0/0:31,0:31:90.31:0,90,5427	0/0:29,0:29:84.28:0,84,5042	0/0:23,0:23:69.24:0,69,4277	0/0:29,0:29:87.30:0,87,4999	0/0:43,0:43:99:0,129,7323	0/0:17,0:17:51.17:0,51,2959	0/0:15,0:15:45.14:0,45,2456	0/0:67,0:66:99:0,202,11783	0/0:25,0:25:72.25:0,72,4449	0/0:17,0:17:51.18:0,51,2978	0/0:36,0:36:99:0,108,6393	1/1:0,16:16:39.13:1526,39,0	0/0:28,0:28:84.29:0,84,4961	0/0:18,0:18:54.19:0,54,3165	0/0:8,0:8:24.08:0,24,1522
chr10	109183697	.	CT	C	7956.23	PASS	AB=0.988;AC=52;AF=0.929;AN=56;BaseQRankSum=9.065;DP=725;FS=2.510;HRun=1;HaplotypeScore=261.2455;InbreedingCoeff=-0.0706;MQ=76.15;MQ0=0;MQRankSum=-3.921;QD=10.97;ReadPosRankSum=9.280;VQSLOD=2.6778;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:30.87:349,31,0	1/1:11,1:12:8.01:131,8,0	0/1:19,1:20:81.18:81,0,157	0/1:21,0:21:37.34:37,0,176	1/1:23,1:24:26.19:246,26,0	1/1:20,0:20:28.76:237,29,0	1/1:36,0:36:53.51:452,54,0	1/1:21,0:21:21.93:208,22,0	1/1:33,0:33:66.85:485,67,0	1/1:28,0:28:67.62:281,68,0	1/1:19,0:19:44.60:203,45,0	1/1:45,0:45:82.05:570,82,0	1/1:35,1:36:47.83:445,48,0	1/1:47,0:47:94.69:639,95,0	1/1:19,0:19:31.42:219,31,0	1/1:23,0:23:15.49:229,15,0	1/1:30,0:30:61.58:394,62,0	1/1:19,0:19:28.31:203,28,0	1/1:20,0:20:16.92:205,17,0	1/1:32,0:32:80.82:404,81,0	1/1:30,2:32:17.21:268,17,0	0/1:24,0:24:12.69:192,0,13	0/1:12,0:12:0.35:86,0,0	1/1:35,0:35:38.98:316,39,0	1/1:25,0:25:68.89:341,69,0	1/1:26,1:27:71.20:348,71,0	1/1:26,0:26:34.38:300,34,0	1/1:7,0:7:19.21:85,19,0
chr10	109183721	.	T	TG	15009.79	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.414;DP=684;FS=17.455;HRun=2;HaplotypeScore=274.6419;InbreedingCoeff=0.9885;MQ=66.94;MQ0=0;MQRankSum=-7.314;QD=22.88;ReadPosRankSum=2.787;VQSLOD=0.9469;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:82.51:736,83,0	1/1:1,12:13:35.46:327,35,0	0/0:13,0:13:33.01:0,33,361	0/0:15,0:15:36.01:0,36,396	1/1:3,20:23:34.70:322,35,0	1/1:0,17:17:44.20:405,44,0	1/1:9,24:33:79.76:463,80,0	1/1:9,10:19:47.54:406,48,0	1/1:2,29:31:90.39:722,90,0	1/1:7,28:35:98.55:1005,99,0	1/1:1,18:19:47.73:458,48,0	1/1:4,43:47:99:1004,122,0	1/1:4,31:35:95.36:760,95,0	1/1:2,43:45:99:1008,108,0	1/1:3,14:17:32.25:303,32,0	1/1:1,26:27:77.62:739,78,0	1/1:3,27:30:86.27:857,86,0	1/1:3,15:18:47.76:482,48,0	1/1:1,13:14:38.74:328,39,0	1/1:1,23:24:30.63:517,31,0	1/1:5,28:33:71.22:710,71,0	1/1:2,16:18:41.35:392,41,0	1/1:1,9:10:20.53:197,21,0	1/1:1,35:36:82.35:796,82,0	1/1:3,21:24:63.65:571,64,0	1/1:2,33:35:99:1019,103,0	1/1:3,14:17:38.05:338,38,0	1/1:1,5:6:14.93:147,15,0
chr10	109183722	.	GA	G	13180.50	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.278;DP=663;FS=21.969;HRun=1;HaplotypeScore=272.4732;InbreedingCoeff=0.9873;MQ=67.02;MQ0=0;MQRankSum=-5.979;QD=20.72;ReadPosRankSum=4.664;VQSLOD=1.3265;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,1:31:79.12:652,79,0	1/1:13,0:13:34.88:291,35,0	0/0:12,0:12:33.04:0,33,352	0/0:15,0:15:39.04:0,39,439	1/1:21,0:21:35.27:299,35,0	1/1:17,0:17:43.67:370,44,0	1/1:29,0:29:67.28:324,67,0	1/1:16,0:16:43.91:323,44,0	1/1:29,0:29:81.82:569,82,0	1/1:35,1:36:97.71:913,98,0	1/1:19,0:19:47.30:410,47,0	1/1:43,0:44:99:838,112,0	1/1:33,1:34:91.76:670,92,0	1/1:45,0:45:99:895,101,0	1/1:16,0:16:27.71:268,28,0	1/1:26,1:27:74.52:661,75,0	1/1:30,0:30:85.34:785,85,0	1/1:15,1:16:47.62:448,48,0	1/1:14,0:14:38.35:289,38,0	1/1:23,1:24:26.89:463,27,0	1/1:30,0:30:67.88:617,68,0	1/1:18,0:18:38.29:349,38,0	1/1:10,0:10:20.02:179,20,0	1/1:35,0:35:80.54:715,81,0	1/1:24,2:26:58.51:511,59,0	1/1:34,1:35:99:917,101,0	1/1:14,1:16:34.70:293,35,0	1/1:5,0:5:14.82:132,15,0
chr10	109183724	.	GA	G	13258.03	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=3.198;DP=666;FS=5.262;HRun=1;HaplotypeScore=273.8651;InbreedingCoeff=0.9839;MQ=68.35;MQ0=0;MQRankSum=-7.142;QD=20.81;ReadPosRankSum=4.670;VQSLOD=4.4346;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:78.76:655,79,0	1/1:0,13:13:35.38:325,35,0	0/0:14,0:14:39.02:0,39,401	0/0:15,0:15:38.67:0,39,382	1/1:0,20:20:33.39:285,33,0	1/1:1,17:18:46.30:399,46,0	1/1:4,25:29:67.79:338,68,0	1/1:5,10:15:43.94:341,44,0	1/1:0,29:29:81.80:567,82,0	1/1:5,29:34:92.02:885,92,0	1/1:1,18:19:47.22:410,47,0	1/1:0,44:44:99:852,117,0	1/1:2,31:33:88.46:639,88,0	1/1:3,43:46:99:874,102,0	1/1:0,16:16:38.21:371,38,0	1/1:1,26:27:70.22:621,70,0	1/1:1,27:28:78.89:679,79,0	1/1:3,15:18:48.22:473,48,0	1/1:2,13:15:41.34:312,41,0	1/1:1,23:24:21.92:452,22,0	1/1:4,28:32:70.86:617,71,0	1/1:1,18:19:46.88:438,47,0	1/1:0,9:9:16.74:137,17,0	1/1:1,35:36:80.53:712,81,0	1/1:2,23:25:63.29:534,63,0	1/1:2,33:35:96.23:874,96,0	1/1:2,15:17:39.84:336,40,0	1/1:0,5:5:14.82:132,15,0
chr10	109183786	.	TC	T	6740.81	PASS	AB=0.977;AC=47;AF=0.839;AN=56;BaseQRankSum=-2.312;DP=702;FS=3.305;HRun=2;HaplotypeScore=258.2435;InbreedingCoeff=-0.2375;MQ=71.82;MQ0=0;MQRankSum=3.140;QD=9.60;ReadPosRankSum=13.746;VQSLOD=0.4180;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:46.46:270,0,46	1/1:13,0:13:18.98:183,19,0	0/1:16,1:17:7.16:145,0,7	0/1:17,3:20:12.19:206,0,12	1/1:23,0:23:32.23:209,32,0	0/1:24,0:24:34.16:199,0,34	1/1:25,0:25:12.17:209,12,0	1/1:29,0:29:41.55:232,42,0	1/1:24,0:24:1.27:256,1,0	1/1:32,0:32:37.68:344,38,0	1/1:18,0:18:14.02:135,14,0	1/1:45,0:45:71.42:570,71,0	1/1:27,0:27:1.02:287,1,0	0/1:41,1:42:25.24:392,0,25	1/1:29,0:29:18.78:337,19,0	1/1:29,0:29:16.10:335,16,0	0/1:21,0:21:31.90:125,0,32	1/1:14,0:14:0.96:140,1,0	0/1:22,0:22:20.25:159,0,20	0/1:17,0:17:13.30:101,0,13	1/1:39,0:39:34.73:338,35,0	1/1:25,0:25:39.56:261,40,0	1/1:16,0:16:4.98:142,5,0	1/1:24,0:24:14.26:193,14,0	1/1:23,0:23:3.94:193,4,0	1/1:25,0:25:60.64:303,61,0	0/1:33,0:33:22.91:327,0,23	1/1:8,0:8:23.20:148,23,0
chr10	109183830	.	CGCG	C	17226.49	PASS	AB=0.889;AC=54;AF=0.964;AN=56;BaseQRankSum=-1.196;DP=528;FS=0.000;HRun=0;HaplotypeScore=197.7663;InbreedingCoeff=-0.0369;MQ=63.42;MQ0=0;MQRankSum=-3.269;QD=32.63;ReadPosRankSum=2.141;VQSLOD=5.0116;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:17:42.13:530,42,0	1/1:0,11:11:30.09:375,30,0	0/1:8,0:8:46.88:118,0,47	0/1:10,4:14:17.73:316,0,18	1/1:0,11:11:27.07:323,27,0	1/1:0,15:15:42.13:536,42,0	1/1:3,14:17:39.12:500,39,0	1/1:0,12:12:36.11:451,36,0	1/1:0,18:18:51.16:643,51,0	1/1:2,24:26:78.21:924,78,0	1/1:1,10:11:30.09:374,30,0	1/1:2,37:39:99:1393,111,0	1/1:1,25:26:78.23:943,78,0	1/1:2,33:35:93.28:1148,93,0	1/1:5,23:28:69.21:881,69,0	1/1:1,22:23:66:838,66,0	1/1:3,19:22:57.18:729,57,0	1/1:1,19:20:54.18:718,54,0	1/1:0,11:11:33.09:391,33,0	1/1:1,10:11:30.09:373,30,0	1/1:2,31:33:69.17:850,69,0	1/1:0,16:16:42.13:518,42,0	1/1:0,15:15:36.11:418,36,0	1/1:2,20:22:42.13:541,42,0	1/1:1,11:12:33.10:411,33,0	1/1:1,12:13:39.11:451,39,0	1/1:2,28:30:87.26:1079,87,0	1/1:0,12:12:36.11:454,36,0
chr10	109183832	.	CG	C	11138.88	PASS	AB=0.778;AC=54;AF=0.964;AN=56;BaseQRankSum=-2.103;DP=545;FS=1.978;HRun=2;HaplotypeScore=204.9214;InbreedingCoeff=-0.0371;MQ=62.28;MQ0=0;MQRankSum=-3.811;QD=20.44;ReadPosRankSum=1.771;VQSLOD=4.6871;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,1:21:50.81:413,51,0	1/1:11,0:11:29.83:235,30,0	0/1:5,2:7:32.41:52,0,32	0/1:10,4:14:33.35:158,0,33	1/1:11,0:11:26.48:197,26,0	1/1:16,0:16:41.87:340,42,0	1/1:17,2:19:41.84:344,42,0	1/1:14,0:14:38.78:321,39,0	1/1:18,0:18:50.75:405,51,0	1/1:24,2:26:76.98:586,77,0	1/1:12,0:12:32.84:258,33,0	1/1:37,2:39:99:861,110,0	1/1:28,0:28:80.41:617,80,0	1/1:34,1:35:92.46:713,92,0	1/1:26,1:27:68.78:572,69,0	1/1:25,0:25:69.69:582,70,0	1/1:21,1:22:56.84:462,57,0	1/1:20,0:20:53.96:470,54,0	1/1:12,0:12:35.64:262,36,0	1/1:10,1:11:29.87:246,30,0	1/1:33,0:33:71.65:575,72,0	1/1:17,0:17:44.78:359,45,0	1/1:15,0:15:35.72:264,36,0	1/1:22,1:23:41.84:339,42,0	1/1:13,0:13:35.84:282,36,0	1/1:12,1:13:38.61:269,39,0	1/1:29,1:31:86.41:669,86,0	1/1:12,0:12:35.89:286,36,0
chr10	109187785	.	CTG	C	4032.71	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.364;DP=762;FS=5.635;HRun=0;HaplotypeScore=190.1742;InbreedingCoeff=0.9960;MQ=86.75;MQ0=2;MQRankSum=-4.778;QD=37.69;ReadPosRankSum=-0.363;VQSLOD=3.8666;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.21:0,69,1257	0/0:10,0:10:27.09:0,27,504	0/0:28,0:28:63.20:0,63,1095	0/0:26,0:26:54.17:0,54,945	1/1:2,9:11:30.08:402,30,0	1/1:3,23:26:75.21:1066,75,0	1/1:4,21:23:57.18:805,57,0	0/0:32,0:32:96.29:0,96,1672	1/1:3,16:19:54.16:770,54,0	0/0:25,0:25:72.25:0,72,1328	0/0:13,0:13:36.11:0,36,641	0/0:40,0:40:99:0,111,1983	0/0:21,0:21:57.20:0,57,1059	0/0:43,0:43:99:0,120,2205	0/0:42,0:42:99:0,117,2127	0/0:28,0:28:15.23:0,15,1331	0/0:24,0:24:66.20:0,66,1202	0/0:17,0:17:48.14:0,48,864	0/0:25,0:25:75.20:0,75,1279	0/0:21,0:21:60.19:0,60,1089	0/0:74,0:72:99:0,205,3606	0/0:19,0:19:48.15:0,48,859	0/0:15,0:15:36.12:0,36,674	0/0:34,0:34:99:0,102,1844	1/1:5,21:26:72.21:990,72,0	0/0:31,0:31:90.29:0,90,1624	0/0:39,0:38:99:0,111,2075	0/0:21,0:21:63.22:0,63,1179
chr10	109197567	.	T	TGGGA	2630.11	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-6.234;DP=687;FS=7.387;HRun=0;HaplotypeScore=114.4657;InbreedingCoeff=0.9403;MQ=65.11;MQ0=0;MQRankSum=0.756;QD=23.69;ReadPosRankSum=-2.698;VQSLOD=2.2602;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:60.20:0,60,950	0/0:5,0:5:9.03:0,9,143	0/0:12,0:12:6.01:0,6,68	0/0:19,0:17:11.21:0,11,108	1/1:3,12:15:23.92:565,24,0	1/1:9,22:31:30.10:682,30,0	1/1:8,12:22:15.05:367,15,0	0/0:20,0:20:18.04:0,18,252	1/1:6,18:24:30.10:734,30,0	0/0:31,0:31:57.19:0,57,930	0/0:23,0:23:49.04:0,49,764	0/0:30,0:30:72.25:0,72,1169	0/0:20,0:20:51.14:0,51,805	0/0:32,0:32:72.21:0,72,1132	0/0:35,0:35:93.29:0,93,1469	0/0:38,0:38:90.27:0,90,1387	0/0:27,0:27:57.16:0,57,881	0/0:16,0:16:36.12:0,36,584	0/0:15,0:15:24.08:0,24,371	0/0:15,0:15:30.10:0,30,488	0/0:78,0:78:99:0,178,2803	0/0:22,0:22:42.14:0,42,686	0/0:20,0:20:45.14:0,45,673	0/0:19,0:19:48.06:0,48,703	1/1:7,10:19:21:456,21,0	0/0:34,0:34:57.17:0,57,866	0/0:25,0:25:54.13:0,54,813	0/0:6,0:6:11.99:0,12,161
chr10	109198503	.	A	AG	2115.07	PASS	AB=0.602;AC=12;AF=0.214;AN=56;BaseQRankSum=-6.522;DP=575;FS=19.653;HRun=0;HaplotypeScore=84.4100;InbreedingCoeff=0.2449;MQ=51.66;MQ0=22;MQRankSum=7.361;QD=8.63;ReadPosRankSum=1.609;VQSLOD=2.2662;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:6,22:28:8.18:241,0,8	0/0:8,0:8:17.93:0,18,161	0/0:23,0:7:7.70:0,8,68	0/0:29,0:11:16.06:0,16,146	0/0:22,0:21:48.54:0,49,324	0/0:21,0:20:59.86:0,60,453	0/0:21,0:20:54.53:0,55,321	0/1:17,23:40:7.01:477,0,7	0/0:10,0:7:20.36:0,20,148	0/0:29,0:29:63.05:0,63,524	0/0:22,0:22:57.90:0,58,487	0/0:21,0:21:48.23:0,48,311	0/0:13,0:13:31.62:0,32,210	0/0:12,0:12:30.12:0,30,218	0/0:15,0:14:40.45:0,40,275	0/0:17,0:16:40.73:0,41,318	1/1:13,19:32:39.39:289,39,0	0/1:17,15:30:84.34:205,0,84	0/1:12,3:25:29.31:299,0,29	0/1:5,14:20:19.56:212,0,20	0/1:3,6:10:2.33:64,0,2	0/0:18,0:18:49.75:0,50,362	0/0:17,0:17:41.11:0,41,312	0/0:22,0:21:41.20:0,41,373	0/0:10,0:9:20.70:0,21,154	0/1:4,9:13:15.41:189,0,15	0/1:5,19:24:34.72:136,0,35	1/1:12,0:10:25.30:167,25,0
chr10	109199055	.	CA	C	7302.06	PASS	AB=0.977;AC=22;AF=0.393;AN=56;BaseQRankSum=2.740;DP=598;FS=1.410;HRun=1;HaplotypeScore=72.2805;InbreedingCoeff=0.7965;MQ=76.50;MQ0=4;MQRankSum=0.139;QD=28.98;ReadPosRankSum=-0.980;VQSLOD=4.3584;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:75.25:1035,75,0	0/0:12,0:12:36.09:0,36,486	0/0:23,0:23:59.16:0,59,756	0/0:19,0:17:33.16:0,33,440	0/0:18,0:18:6.92:0,7,84	0/0:14,0:14:9.32:0,9,84	0/1:20,1:21:53.95:92,0,54	1/1:0,17:15:45.06:519,45,0	0/0:23,0:23:32.70:0,33,180	0/0:17,0:17:51.10:0,51,700	0/0:20,0:20:60.09:0,60,781	0/0:25,0:25:72.19:0,72,964	0/0:29,0:29:81.21:0,81,1096	0/0:24,0:24:72.22:0,72,1000	0/0:16,0:16:48.14:0,48,655	0/0:20,0:20:60.16:0,60,819	1/1:0,23:23:54.18:753,54,0	1/1:0,15:15:33.11:452,33,0	1/1:6,8:13:33.10:441,33,0	1/1:0,34:34:93.07:1176,93,0	1/1:2,29:30:87.15:1167,87,0	0/0:27,0:27:81.24:0,81,1140	0/0:28,0:28:64.29:0,64,1067	0/0:31,0:31:92.76:0,93,1238	0/1:22,0:21:61.87:100,0,62	1/1:1,16:16:1.16:503,1,0	1/1:0,19:18:48.16:647,48,0	1/1:0,11:11:30.10:418,30,0
chr10	109201456	.	ATCTC	A	756.98	PASS	AB=0.950;AC=12;AF=0.231;AN=52;BaseQRankSum=-3.809;DP=535;FS=9.408;HRun=0;HaplotypeScore=119.9928;InbreedingCoeff=0.2057;MQ=65.08;MQ0=19;MQRankSum=0.954;QD=5.05;ReadPosRankSum=1.169;VQSLOD=1.8016;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:12.01:0,12,169	0/0:9,0:9:3.01:0,3,32	./.	./.	1/1:24,0:25:26.74:350,27,0	0/1:17,0:17:72.71:110,0,73	1/1:14,0:12:9.03:131,9,0	0/0:37,0:36:10.23:0,10,94	1/1:11,0:11:11.64:136,12,0	0/1:24,0:23:47.78:48,0,242	0/1:14,6:19:29.07:29,0,56	0/0:15,0:15:12.93:0,13,205	0/0:20,0:20:21.28:0,21,291	0/0:14,0:14:21.05:0,21,311	0/0:16,0:16:6.02:0,6,102	0/1:12,0:13:20.58:21,0,177	0/0:19,0:18:19.06:0,19,204	0/0:11,0:9:13.86:0,14,195	0/0:16,0:15:12.03:0,12,179	0/0:38,0:38:9.03:0,9,148	0/0:10,0:10:9.03:0,9,137	0/0:17,0:17:9.03:0,9,144	0/0:26,0:26:6.02:0,6,96	0/0:26,0:24:39.09:0,39,598	0/1:13,0:13:68.58:69,0,82	0/0:18,0:17:9.97:0,10,193	0/1:13,0:13:20.13:20,0,174	0/0:15,0:13:2.59:0,3,34
chr10	109201501	.	TCACACA	T	1802.32	PASS	AB=0.942;AC=28;AF=0.560;AN=50;BaseQRankSum=1.103;DP=431;FS=34.102;HRun=0;HaplotypeScore=115.0224;InbreedingCoeff=0.3583;MQ=43.66;MQ0=32;MQRankSum=1.172;QD=6.32;ReadPosRankSum=-0.957;VQSLOD=0.3164;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:19:3.01:50,3,0	0/0:7,0:6:2.89:0,3,73	./.	./.	1/1:24,0:25:9.03:163,9,0	1/1:18,0:17:5.72:95,6,0	1/1:21,0:17:8.55:148,9,0	0/0:9,0:9:0:0,0,0	1/1:12,0:11:5.69:100,6,0	0/0:19,0:17:19.84:0,20,203	0/0:16,0:15:2.48:0,2,23	0/0:14,0:14:10.71:0,11,70	0/1:17,0:17:12.53:13,0,50	0/0:20,0:18:8.23:0,8,60	0/0:13,0:12:5.06:0,5,199	0/0:18,0:18:15.05:0,15,360	1/1:12,0:11:6.02:104,6,0	1/1:15,0:10:7.28:141,7,0	1/1:11,2:13:5.99:118,6,0	./.	1/1:19,0:19:9.03:176,9,0	0/0:16,0:15:2.96:0,3,116	1/1:11,0:10:4.31:14,4,0	0/1:35,0:31:16.41:16,0,311	0/1:15,0:15:15.18:138,0,15	0/1:14,6:18:21.18:274,0,21	1/1:19,0:20:18.50:319,18,0	1/1:8,0:7:6.02:93,6,0
chr10	109203479	.	C	CGT	1316.61	PASS	AB=0.890;AC=32;AF=0.696;AN=46;BaseQRankSum=1.273;DP=580;FS=2.806;HRun=0;HaplotypeScore=123.1714;InbreedingCoeff=0.2602;MQ=56.08;MQ0=17;MQRankSum=-1.971;QD=3.55;ReadPosRankSum=-0.313;VQSLOD=2.7005;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:28:3:28,3,0	0/0:6,0:6:6.02:0,6,65	./.	./.	1/1:21,0:21:5.99:51,6,0	1/1:18,0:18:5.92:67,6,0	1/1:27,0:27:8.97:94,9,0	1/1:24,0:23:20.86:161,21,0	1/1:22,0:22:8.98:87,9,0	0/0:13,0:13:4.57:0,5,62	0/0:10,0:10:14.96:0,15,136	0/0:28,0:28:2.58:0,3,32	0/1:15,0:15:18.94:19,0,26	1/1:20,0:20:12.01:134,12,0	0/1:21,0:21:7.14:38,0,7	0/1:17,6:23:31.52:118,0,32	1/1:21,0:22:11.64:99,12,0	1/1:10,0:10:3:25,3,0	1/1:21,0:21:5.99:50,6,0	./.	0/0:36,0:32:0.34:0,0,1	1/1:12,0:12:3:25,3,0	1/1:6,0:6:3.01:32,3,0	0/1:22,10:31:22.19:80,0,22	./.	1/1:21,0:21:20.88:169,21,0	1/1:23,0:22:18.49:181,18,0	./.
chr10	109203523	.	T	TGT	821.67	PASS	AB=1.000;AC=34;AF=0.654;AN=52;BaseQRankSum=1.269;DP=416;FS=4.993;HRun=0;HaplotypeScore=74.7475;InbreedingCoeff=0.2424;MQ=59.99;MQ0=10;MQRankSum=-0.309;QD=2.98;ReadPosRankSum=-1.802;VQSLOD=1.3898;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:21:2.92:28,3,0	0/0:5,0:5:6.02:0,6,65	0/0:27,0:19:0.46:0,0,1	0/0:27,0:14:1.76:0,2,5	1/1:15,0:15:5.86:51,6,0	1/1:12,0:12:5.83:67,6,0	1/1:17,0:17:9.01:94,9,0	1/1:19,0:18:3.45:22,3,0	1/1:11,0:12:6.01:67,6,0	0/0:20,0:20:5.27:0,5,64	0/0:15,0:15:14.96:0,15,136	0/0:18,0:18:3:0,3,32	0/1:13,0:13:18.94:19,0,26	1/1:11,0:11:12.01:134,12,0	1/1:10,4:16:2.84:43,3,0	0/1:18,0:17:31.52:118,0,32	1/1:20,0:19:4.78:31,5,0	1/1:8,0:8:3:26,3,0	1/1:16,0:16:2.74:12,3,0	./.	0/0:23,0:20:0.32:0,0,0	1/1:12,0:12:1.41:22,1,0	1/1:7,0:7:3.01:32,3,0	0/1:21,0:20:23.13:80,0,23	0/1:12,0:11:0:0,0,0	1/1:10,0:10:6.01:71,6,0	1/1:14,0:13:3.01:42,3,0	./.
chr10	109204232	.	A	AGTGC	12559.70	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-14.198;DP=677;FS=0.351;HRun=0;HaplotypeScore=106.6199;InbreedingCoeff=0.9908;MQ=81.27;MQ0=0;MQRankSum=-1.472;QD=44.70;ReadPosRankSum=2.174;VQSLOD=5.3854;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:87.21:0,87,1342	0/0:13,0:13:33.11:0,33,560	0/0:26,0:26:35.70:0,36,535	0/0:20,0:20:42.60:0,43,669	1/1:4,7:12:18.06:445,18,0	1/1:3,14:18:42.14:1038,42,0	1/1:12,23:37:57.16:1395,57,0	0/0:34,0:34:45.13:0,45,695	1/1:3,15:18:33.11:819,33,0	0/0:26,0:26:57.17:0,57,918	0/0:12,0:12:24.08:0,24,407	1/1:5,21:27:44.82:1119,45,0	1/1:7,23:32:69.24:1705,69,0	1/1:10,22:32:63.22:1560,63,0	1/1:6,24:31:60.21:1490,60,0	0/0:24,0:23:45.15:0,45,764	0/0:46,0:46:99:0,114,1893	0/0:41,0:41:99:0,105,1630	0/0:15,0:15:21.07:0,21,355	0/0:6,0:6:18.06:0,18,305	0/0:47,0:47:96.33:0,96,1629	1/1:5,7:12:18.06:448,18,0	1/1:3,5:8:12.04:299,12,0	1/1:9,21:34:54.19:1343,54,0	1/1:3,16:19:36.12:899,36,0	0/0:21,0:21:48.16:0,48,791	0/0:21,0:21:51.17:0,51,864	0/0:8,0:8:21.04:0,21,327
chr10	109211060	.	TTC	T	2693.01	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=-0.672;DP=448;FS=24.142;HRun=0;HaplotypeScore=65.1064;InbreedingCoeff=0.1471;MQ=55.93;MQ0=5;MQRankSum=3.984;QD=7.34;ReadPosRankSum=-5.641;VQSLOD=0.2102;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:33:4.74:162,5,0	1/1:9,0:9:19.08:128,19,0	0/0:17,0:11:16.02:0,16,200	0/1:9,0:5:15.09:15,0,42	0/1:22,0:22:13.38:116,0,13	1/1:16,0:15:5.90:128,6,0	0/1:5,0:5:1.16:1,0,2	1/1:34,0:25:44.73:321,45,0	1/1:5,0:4:4.25:29,4,0	0/0:25,0:25:62.82:0,63,717	0/0:23,0:23:53.86:0,54,622	1/1:10,1:11:24.02:228,24,0	1/1:2,9:11:5.95:63,6,0	1/1:15,1:16:37.06:305,37,0	1/1:19,2:21:38.21:392,38,0	0/1:13,0:13:21.80:42,0,22	0/1:15,0:13:7.47:45,0,7	0/1:20,0:19:11.24:70,0,11	1/1:15,0:14:23.34:167,23,0	0/1:12,0:9:3.75:44,0,4	1/1:11,0:11:1.76:23,2,0	1/1:2,0:2:5.91:44,6,0	1/1:8,0:8:15.23:90,15,0	1/1:13,0:13:2.94:18,3,0	0/1:16,0:16:15.15:91,0,15	0/1:26,0:24:8.08:269,0,8	0/1:22,0:22:35.14:71,0,35	0/0:16,0:15:7.57:0,8,43
chr10	109211061	.	TC	T	4659.43	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=3.833;DP=438;FS=8.709;HRun=1;HaplotypeScore=53.8570;InbreedingCoeff=0.6481;MQ=54.24;MQ0=5;MQRankSum=-1.619;QD=12.43;ReadPosRankSum=-1.574;VQSLOD=2.1418;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:33:70.87:445,71,0	1/1:8,1:9:23.28:192,23,0	0/0:16,0:10:9.13:0,9,154	0/1:8,0:4:15.10:15,0,42	1/1:22,0:22:18.42:148,18,0	1/1:16,0:15:20.97:154,21,0	1/1:4,0:4:8.35:47,8,0	1/1:33,0:24:58.71:437,59,0	1/1:5,0:4:5.98:48,6,0	0/0:24,0:24:51.19:0,51,555	0/0:23,0:23:49.13:0,49,494	1/1:10,0:10:23.98:208,24,0	1/1:10,0:10:6.02:70,6,0	1/1:12,5:17:49.99:482,50,0	1/1:14,7:21:53.31:537,53,0	1/1:13,0:13:28.57:193,29,0	1/1:15,0:13:33.02:185,33,0	1/1:18,0:17:16.18:126,16,0	1/1:15,0:14:36.32:212,36,0	1/1:12,0:9:11.46:77,11,0	1/1:11,0:11:6.15:38,6,0	1/1:2,0:2:5.95:46,6,0	1/1:7,1:8:18.97:138,19,0	1/1:1,12:13:3.01:41,3,0	1/1:15,0:15:28.28:150,28,0	1/1:26,0:24:59.49:420,59,0	1/1:21,0:21:24.41:173,24,0	1/1:16,0:15:17.54:78,18,0
chr10	109215919	.	CTT	C	4444.72	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.968;DP=595;FS=4.273;HRun=3;HaplotypeScore=103.8406;InbreedingCoeff=0.9893;MQ=73.73;MQ0=0;MQRankSum=2.237;QD=35.56;ReadPosRankSum=3.785;VQSLOD=4.6312;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:81.16:0,81,1411	0/0:4,0:4:12.04:0,12,232	0/0:12,0:12:33.11:0,33,637	0/0:15,0:15:15.47:0,15,483	1/1:2,31:34:78.26:1189,78,0	1/1:0,22:22:51.17:779,51,0	1/1:1,21:22:48.16:733,48,0	0/0:39,0:39:99:0,111,2064	1/1:1,24:25:54.18:825,54,0	0/0:35,0:35:99:0,102,1940	0/0:23,0:23:63.22:0,63,1190	0/0:27,0:27:72.20:0,72,1283	0/0:15,0:15:45.12:0,45,831	0/0:17,0:17:48.15:0,48,864	0/0:13,0:13:36.12:0,36,695	0/0:17,0:17:51.13:0,51,915	0/0:26,0:26:66.16:0,66,1182	0/0:25,0:25:75.26:0,75,1434	0/0:20,0:19:57.18:0,57,1062	0/0:21,0:21:60.20:0,60,1128	0/0:22,0:22:63.16:0,63,1148	0/0:14,0:14:42.14:0,42,811	0/0:18,0:18:48.15:0,48,926	0/0:21,0:21:60.12:0,60,1082	1/1:0,22:22:60.20:917,60,0	0/0:26,0:26:78.26:0,78,1476	0/0:21,0:21:63.13:0,63,1109	0/0:10,0:10:30.08:0,30,516
chr10	109216042	.	CT	C	937.18	PASS	AB=0.898;AC=20;AF=0.417;AN=48;BaseQRankSum=-5.093;DP=420;FS=11.119;HRun=15;HaplotypeScore=81.2020;InbreedingCoeff=0.2600;MQ=58.35;MQ0=11;MQRankSum=4.110;QD=3.60;ReadPosRankSum=5.247;VQSLOD=-0.2904;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:25,13:36:39.57:326,40,0	1/1:7,0:7:1.42:5,1,0	0/0:25,0:9:0.25:0,0,38	0/0:33,0:9:3.86:0,4,23	./.	./.	./.	0/1:28,6:35:15.27:123,0,15	0/0:2,0:2:0:0,0,0	0/0:21,1:22:5.78:0,6,156	0/0:11,0:12:18.67:0,19,109	0/1:9,0:8:2.79:3,0,40	0/0:9,0:9:18.40:0,18,104	0/0:7,0:7:8.12:0,8,29	0/0:13,0:13:27.93:0,28,181	0/0:15,0:14:5.08:0,5,95	1/1:17,3:20:7.43:113,7,0	1/1:15,3:18:9.11:152,9,0	0/1:11,6:16:22.90:47,0,23	0/1:25,4:28:7.29:100,0,7	0/0:2,0:2:0:0,0,0	0/0:14,0:14:33.48:0,33,234	0/1:13,1:15:15.44:15,0,88	0/1:18,0:16:17.68:18,0,82	./.	1/1:17,1:20:13.58:103,14,0	1/1:14,0:14:2.87:46,3,0	1/1:17,3:19:3.45:34,3,0
chr10	109216057	.	TG	T	1954.71	PASS	AB=0.989;AC=28;AF=0.609;AN=46;BaseQRankSum=3.327;DP=443;FS=11.617;HRun=1;HaplotypeScore=68.0271;InbreedingCoeff=-0.3985;MQ=45.76;MQ0=30;MQRankSum=-3.445;QD=4.65;ReadPosRankSum=3.396;VQSLOD=-0.5905;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:35:45.56:307,46,0	0/1:4,0:4:1.86:26,0,2	0/1:26,0:7:7.64:8,0,18	0/1:32,3:6:6.68:7,0,29	./.	./.	./.	0/1:37,0:37:99:228,0,101	./.	0/1:21,0:20:30.43:30,0,144	0/1:18,0:18:46.98:47,0,125	0/1:13,0:12:54.66:55,0,65	0/1:11,0:11:39.89:40,0,75	0/1:9,0:9:57.08:57,0,59	0/1:13,0:13:78.65:79,0,93	0/1:17,0:16:51.64:82,0,52	1/1:18,0:18:29.08:164,29,0	1/1:20,0:20:25.66:187,26,0	0/1:19,0:16:61.24:61,0,110	0/1:25,1:26:0.16:200,0,0	1/1:3,0:2:3.73:15,4,0	0/0:14,0:14:22.34:0,22,175	0/1:14,1:14:39.44:39,0,141	1/1:18,1:16:3.78:89,4,0	./.	0/1:25,0:22:12.51:155,0,13	1/1:15,0:16:24.66:183,25,0	0/1:16,0:12:32.85:37,0,33
chr10	109216214	.	CTGTG	C	2831.93	PASS	AB=0.800;AC=15;AF=0.268;AN=56;BaseQRankSum=4.419;DP=739;FS=5.648;HRun=0;HaplotypeScore=149.5137;InbreedingCoeff=0.8478;MQ=64.39;MQ0=12;MQRankSum=0.997;QD=15.23;ReadPosRankSum=0.537;VQSLOD=3.0866;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:54.08:0,54,951	0/0:8,0:9:20.72:0,21,346	0/0:22,0:13:8:0,8,48	0/0:39,0:28:26.52:0,27,247	0/0:30,0:30:1.40:0,1,292	0/0:24,0:24:31.83:0,32,476	0/0:28,0:27:32.03:0,32,459	0/0:28,0:28:26.42:0,26,224	0/0:15,0:15:21.07:0,21,344	0/0:27,0:26:54.12:0,54,858	0/0:18,0:18:35.76:0,36,480	1/1:10,21:34:12.66:433,13,0	1/1:4,15:20:39.13:605,39,0	1/1:6,14:19:15.05:243,15,0	1/1:2,23:26:39.13:613,39,0	0/0:15,0:18:32.82:0,33,590	0/0:40,0:41:58.26:0,58,1136	0/0:22,0:25:44.71:0,45,669	0/0:22,0:23:10.07:0,10,237	0/0:24,0:22:47.84:0,48,878	0/0:58,0:57:99:0,108,1595	1/1:4,13:19:20.83:342,21,0	1/1:7,4:12:17.95:211,18,0	1/1:10,24:38:18.57:569,19,0	0/0:24,0:30:55.57:0,56,682	0/0:31,0:34:62.38:0,62,1196	0/0:15,0:15:30.07:0,30,584	0/1:12,1:16:10.22:10,0,521
chr10	109216240	.	G	GTC	2537.80	PASS	AB=0.840;AC=11;AF=0.196;AN=56;BaseQRankSum=-5.012;DP=767;FS=9.162;HRun=0;HaplotypeScore=129.4611;InbreedingCoeff=0.7158;MQ=54.31;MQ0=21;MQRankSum=0.537;QD=14.02;ReadPosRankSum=2.398;VQSLOD=2.9810;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:82.09:0,82,1121	0/0:9,0:8:23.70:0,24,255	0/1:16,0:5:44.72:57,0,45	0/0:31,0:19:36.46:0,36,377	1/1:8,17:25:8.31:382,8,0	0/1:2,25:28:0.52:486,0,1	1/1:4,28:30:19.83:507,20,0	0/0:26,0:19:16.72:0,17,433	1/1:1,19:20:21.07:399,21,0	0/0:26,0:25:65.50:0,65,830	0/0:16,0:16:38.87:0,39,424	0/0:32,0:33:4.18:0,4,272	0/0:27,0:28:56.62:0,57,419	0/0:27,0:26:44.77:0,45,348	0/0:32,0:32:59.65:0,60,445	0/0:20,0:20:44.88:0,45,500	0/0:45,0:46:40.93:0,41,1211	0/1:21,0:21:0.56:1,0,570	0/0:29,0:19:16.31:0,16,451	0/0:28,1:27:71.91:0,72,852	0/0:56,0:54:99:0,113,1574	0/0:20,0:20:32.57:0,33,250	0/0:12,0:11:20.21:0,20,128	0/0:37,0:36:29.31:0,29,303	1/1:29,9:38:43.06:869,43,0	0/0:31,0:30:34.16:0,34,913	0/0:17,0:16:41.99:0,42,509	0/0:18,0:18:47.51:0,48,494
chr10	109217275	.	C	CTGTG	6548.37	PASS	AB=0.902;AC=32;AF=0.571;AN=56;BaseQRankSum=1.342;DP=838;FS=3.417;HRun=0;HaplotypeScore=196.6445;InbreedingCoeff=0.3106;MQ=61.22;MQ0=9;MQRankSum=-2.404;QD=10.65;ReadPosRankSum=-0.536;VQSLOD=4.3028;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,22:37:18:414,18,0	0/1:10,0:12:0.88:1,0,319	0/0:43,0:31:20.34:0,20,327	0/1:40,0:25:9.18:9,0,163	1/1:27,0:24:11.98:145,12,0	1/1:22,0:20:4:26,4,0	1/1:32,0:30:24.31:226,24,0	1/1:23,0:25:24.91:366,25,0	1/1:12,0:27:17.18:221,17,0	0/0:29,0:34:47.23:0,47,764	0/0:21,0:23:35.98:0,36,504	0/1:22,0:22:61.56:62,0,320	0/0:29,0:29:39.89:0,40,536	0/1:28,0:28:3.03:3,0,346	0/0:35,0:35:21.61:0,22,579	0/0:31,0:34:79.20:0,79,1311	1/1:13,34:49:69.03:1416,69,0	0/1:17,3:27:14.13:531,0,14	1/1:16,8:25:3.29:281,3,0	0/1:10,8:20:22.95:75,0,23	0/1:24,28:59:99:639,0,102	0/0:25,0:25:17.17:0,17,328	0/1:25,0:24:39.64:40,0,208	0/1:33,0:33:50.30:50,0,471	0/1:28,0:26:0.11:0,0,0	1/1:14,25:41:40.98:1217,41,0	1/1:8,6:15:14.90:231,15,0	1/1:2,13:18:1.48:594,1,0
chr10	109217280	.	T	TGTGTGTGTGTGTGT	4504.53	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=0.033;DP=849;FS=3.667;HRun=0;HaplotypeScore=338.7378;InbreedingCoeff=-0.0804;MQ=59.84;MQ0=13;MQRankSum=-1.844;QD=6.62;ReadPosRankSum=-3.745;VQSLOD=2.3346;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:5.53:29,0,6	0/1:16,0:16:0.88:1,0,698	0/0:41,0:27:21.55:0,22,243	0/1:41,0:23:27.97:28,0,81	1/1:27,0:24:12.89:260,13,0	1/1:22,0:20:11.83:171,12,0	1/1:35,0:33:25.38:519,25,0	1/1:25,0:24:33.05:512,33,0	1/1:29,0:28:18.06:866,18,0	0/0:36,0:36:62.73:0,63,1435	0/0:22,0:22:35.98:0,36,926	0/1:24,0:24:15.85:16,0,901	0/1:28,0:28:7.34:7,0,1483	0/1:24,0:24:8.59:9,0,927	0/0:35,0:35:12.29:0,12,1649	0/0:35,0:35:90:0,90,2676	0/1:48,0:48:18.48:229,0,18	0/1:26,0:26:99:213,0,327	1/1:24,0:23:29.65:349,30,0	0/1:21,0:21:60.32:60,0,94	0/1:61,0:60:91.81:92,0,397	0/1:27,0:27:7.13:7,0,792	0/1:30,0:29:56.95:57,0,622	0/1:31,0:31:40.86:41,0,1334	1/1:17,12:28:2.54:36,3,0	0/1:40,0:40:99:852,0,146	0/1:17,0:16:3.59:38,0,4	0/1:19,0:19:94.13:112,0,94
chr10	109217297	.	GTC	G	4413	PASS	AB=0.961;AC=28;AF=0.500;AN=56;BaseQRankSum=-5.222;DP=839;FS=11.316;HRun=0;HaplotypeScore=163.3572;InbreedingCoeff=-0.1411;MQ=55.89;MQ0=16;MQRankSum=0.762;QD=6.87;ReadPosRankSum=-11.703;VQSLOD=0.3931;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:18.94:214,19,0	0/0:15,0:15:14.10:0,14,499	0/0:40,0:22:31.62:0,32,490	0/0:40,0:20:11.87:0,12,339	1/1:26,0:23:18.78:144,19,0	1/1:23,0:21:11.94:110,12,0	1/1:31,2:31:14:206,14,0	0/1:26,0:24:73.34:211,0,73	1/1:22,0:21:12.99:83,13,0	0/0:36,0:36:60.63:0,61,1192	0/0:23,0:23:43.21:0,43,789	0/1:23,3:26:99:255,0,194	0/1:26,5:31:99:334,0,261	0/1:28,0:28:99:182,0,279	0/1:34,2:36:99:256,0,338	0/0:42,0:42:96.34:0,96,1698	0/1:46,0:46:19.05:97,0,19	0/1:22,1:23:25.46:182,0,25	1/1:16,0:14:1.82:259,2,0	0/1:21,0:21:8.04:128,0,8	0/1:63,2:64:49.54:358,0,50	0/1:24,1:25:99:134,0,187	0/1:22,2:23:97.50:250,0,97	0/1:31,3:34:99:330,0,259	0/1:22,1:21:11.45:19,0,11	0/1:39,1:40:19.38:553,0,19	0/1:19,0:18:12.83:105,0,13	0/1:18,0:18:1.57:2,0,48
chr10	109219372	.	T	TCTCTG	7104.72	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-9.923;DP=892;FS=5.128;HRun=0;HaplotypeScore=180.5946;InbreedingCoeff=0.8834;MQ=91.39;MQ0=2;MQRankSum=-2.696;QD=36.25;ReadPosRankSum=-1.955;VQSLOD=4.3487;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:66:99:0,163,2917	0/0:7,0:7:15.05:0,15,273	0/0:40,0:38:42.57:0,43,659	0/1:63,0:54:76.47:76,0,568	1/1:8,19:27:48.16:1380,48,0	1/1:6,16:23:45.15:1295,45,0	1/1:13,16:30:57.20:1602,57,0	0/0:30,0:30:45.15:0,45,815	1/1:6,14:21:48.16:1370,48,0	0/0:35,0:35:69.23:0,69,1264	0/0:19,0:19:48.16:0,48,901	0/0:33,0:33:78.25:0,78,1388	0/0:36,0:36:99:0,102,1821	0/0:30,0:30:66.21:0,66,1202	0/0:34,0:34:84.27:0,84,1533	0/0:22,0:22:48.16:0,48,895	0/0:44,0:44:99:0,105,1937	0/0:16,0:16:42.14:0,42,738	0/0:30,0:30:48.16:0,48,901	0/0:32,0:32:75.26:0,75,1373	0/0:58,0:58:99:0,120,2046	0/0:27,0:27:66.21:0,66,1179	0/0:30,0:30:78.25:0,78,1413	0/0:26,0:26:69.18:0,69,1216	1/1:11,17:32:48.16:1381,48,0	0/0:34,0:34:63.21:0,63,1155	0/0:33,0:33:81.26:0,81,1488	0/0:14,0:14:27.09:0,27,507
chr10	109221720	.	GA	G	1738.05	PASS	AB=0.891;AC=12;AF=0.214;AN=56;BaseQRankSum=8.507;DP=590;FS=0.416;HRun=10;HaplotypeScore=63.2714;InbreedingCoeff=0.8557;MQ=76.52;MQ0=0;MQRankSum=0.527;QD=12.41;ReadPosRankSum=1.225;VQSLOD=3.2980;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,2:43:69.42:0,69,1054	0/0:8,0:8:24.06:0,24,266	0/0:20,0:18:18.33:0,18,215	0/1:13,2:15:0.36:0,0,221	1/1:2,18:20:50.98:442,51,0	1/1:9,16:25:32.15:398,32,0	1/1:4,14:18:38.99:339,39,0	0/0:26,2:29:10.87:0,11,545	1/1:1,13:15:38.03:319,38,0	0/0:16,0:16:33.07:0,33,352	0/0:16,0:16:42.11:0,42,457	0/0:27,0:27:63.17:0,63,697	0/0:13,0:13:33.09:0,33,365	0/0:22,1:23:28.12:0,28,538	0/0:18,0:18:48.09:0,48,511	0/0:21,1:24:27.92:0,28,519	0/0:32,3:36:17.94:0,18,865	0/0:23,1:25:36.93:0,37,609	0/1:22,3:27:2.42:2,0,605	0/0:13,0:13:24:0,24,231	0/0:21,0:22:51.60:0,52,558	0/0:16,0:16:39.08:0,39,416	0/0:15,0:15:42.03:0,42,434	0/0:19,0:19:36.32:0,36,486	1/1:1,17:20:49.90:412,50,0	0/0:21,1:23:33.92:0,34,565	0/0:26,0:26:66.62:0,67,715	0/0:17,1:18:15.98:0,16,363
chr10	109222694	.	ATG	A	10499.89	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.096;DP=716;FS=0.292;HRun=0;HaplotypeScore=88.1447;InbreedingCoeff=0.9992;MQ=85.40;MQ0=0;MQRankSum=-3.824;QD=40.38;ReadPosRankSum=1.089;VQSLOD=6.3492;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:37:99:1515,99,0	0/0:10,0:10:30.10:0,30,579	0/0:22,0:22:63.22:0,63,1211	0/0:25,0:25:39.87:0,40,1260	0/0:21,0:21:63.22:0,63,1190	0/0:25,0:25:75.26:0,75,1449	0/0:26,0:26:78.27:0,78,1507	1/1:2,22:24:66.20:968,66,0	0/0:30,0:30:87.30:0,87,1663	0/0:30,0:30:87.30:0,87,1679	0/0:18,0:18:54.15:0,54,960	0/0:31,0:31:84.26:0,84,1552	0/0:29,0:29:84.23:0,84,1570	0/0:37,0:37:99:0,111,2107	0/0:48,0:48:99:0,144,2771	0/0:18,0:17:54.19:0,54,1034	1/1:0,41:41:99:1607,105,0	1/1:0,15:15:45.15:689,45,0	1/1:3,22:25:66.20:968,66,0	1/1:0,20:20:60.20:918,60,0	1/1:1,32:33:84.29:1286,84,0	0/0:14,0:14:42.13:0,42,765	0/0:11,0:11:30.10:0,30,577	0/0:37,0:37:99:0,111,2130	0/0:24,0:24:69.24:0,69,1332	1/1:2,24:26:72.22:1080,72,0	1/1:1,28:29:75.25:1148,75,0	1/1:0,10:10:21.07:321,21,0
chr10	109223698	.	A	AGT	22901.88	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-13.798;DP=603;FS=15.189;HRun=0;HaplotypeScore=60.0398;InbreedingCoeff=0.9529;MQ=97.81;MQ0=1;MQRankSum=-10.001;QD=48.73;ReadPosRankSum=3.983;VQSLOD=4.5932;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:22:54.19:1005,54,0	0/0:7,0:7:21.07:0,21,309	0/0:33,0:33:96.22:0,96,1361	0/0:30,0:30:78.21:0,78,1093	1/1:3,18:22:51.17:955,51,0	1/1:0,18:17:45.15:843,45,0	1/1:0,28:29:75.26:1405,75,0	1/1:0,35:35:99:1898,105,0	1/1:1,20:21:60.21:1123,60,0	0/0:25,0:25:72.24:0,72,1060	0/0:17,0:17:48.16:0,48,706	1/1:2,22:24:66.23:1235,66,0	1/1:0,20:21:60.21:1122,60,0	1/1:1,23:24:54.19:1011,54,0	1/1:1,27:28:72.25:1348,72,0	0/0:20,1:21:4:0,4,782	1/1:0,19:19:57.20:1067,57,0	1/1:1,18:19:54.19:1011,54,0	1/1:2,21:24:69.20:1226,69,0	1/1:0,12:12:36.12:672,36,0	1/1:1,48:49:99:2416,129,0	1/1:3,8:11:21.07:393,21,0	1/1:2,8:10:24.08:449,24,0	1/1:0,16:16:42.14:786,42,0	1/1:2,20:22:57.20:1068,57,0	1/1:3,18:21:16.01:970,16,0	1/1:2,17:19:39.13:729,39,0	1/1:1,3:4:9.03:169,9,0
chr10	109225306	.	AAAT	A	2446.72	PASS	AB=0.874;AC=39;AF=0.696;AN=56;BaseQRankSum=2.382;DP=477;FS=2.875;HRun=0;HaplotypeScore=74.4770;InbreedingCoeff=0.5432;MQ=46.99;MQ0=56;MQRankSum=0.777;QD=9.34;ReadPosRankSum=2.876;VQSLOD=3.0170;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:14:8.56:70,9,0	0/0:7,0:7:21.04:0,21,361	0/0:86,0:10:10.46:0,10,148	0/0:84,0:9:17.15:0,17,166	1/1:18,1:18:27.47:182,27,0	1/1:11,0:9:17.69:109,18,0	1/1:6,1:7:1.95:85,2,0	1/1:19,3:22:24.42:296,24,0	1/1:8,0:6:7.87:31,8,0	0/0:12,0:12:29.71:0,30,533	0/0:12,0:11:21.06:0,21,328	1/1:2,2:2:6.02:83,6,0	1/1:0,4:4:2.97:41,3,0	1/1:4,4:5:5.94:77,6,0	1/1:2,7:7:12.04:169,12,0	0/0:8,0:5:15.05:0,15,282	1/1:24,4:27:30.88:336,31,0	1/1:28,0:25:39.17:163,39,0	0/1:21,1:17:19.25:238,0,19	1/1:6,1:7:13.01:114,13,0	0/0:5,0:3:1.25:0,1,3	1/1:1,2:2:5.87:34,6,0	0/1:2,2:3:48.87:51,0,49	1/1:3,1:1:3.01:42,3,0	1/1:18,3:20:23.25:241,23,0	1/1:18,0:17:2.95:189,3,0	0/1:12,0:11:2.80:35,0,3	1/1:7,0:5:10.40:42,10,0
chr10	109225307	.	AAT	A	4424.35	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=2.500;DP=472;FS=2.058;HRun=0;HaplotypeScore=63.9287;InbreedingCoeff=0.6770;MQ=48.58;MQ0=53;MQRankSum=0.110;QD=17.08;ReadPosRankSum=4.286;VQSLOD=4.4367;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,3:13:17.18:131,17,0	0/0:7,0:7:20.99:0,21,277	0/0:87,0:10:10.28:0,10,120	0/0:85,0:10:19.56:0,20,135	1/1:4,14:17:34.71:371,35,0	1/1:5,5:9:23.76:224,24,0	1/1:7,0:7:12.86:110,13,0	1/1:5,16:21:55.75:487,56,0	1/1:2,6:6:9.03:106,9,0	0/0:12,0:12:30.20:0,30,413	0/0:12,0:11:21.01:0,21,259	1/1:3,0:2:5.99:47,6,0	1/1:4,0:4:2.99:23,3,0	1/1:8,0:5:5.95:43,6,0	1/1:9,0:7:11.97:97,12,0	0/0:8,0:5:15:0,15,212	1/1:9,19:27:51.09:643,51,0	1/1:4,23:24:45.10:509,45,0	1/1:10,12:17:0.40:374,0,0	1/1:3,3:6:17.71:149,18,0	1/1:5,0:3:2.67:11,3,0	1/1:3,0:2:5.87:35,6,0	0/1:4,0:3:33.33:33,0,36	1/1:4,0:1:2.99:24,3,0	1/1:6,14:20:35.11:322,35,0	1/1:4,14:17:27.01:404,27,0	1/1:2,10:11:11.88:140,12,0	1/1:2,4:5:12.04:143,12,0
chr10	109225308	.	AT	A	3043.81	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=3.449;DP=473;FS=3.013;HRun=3;HaplotypeScore=64.2557;InbreedingCoeff=0.7071;MQ=49.88;MQ0=53;MQRankSum=0.459;QD=11.89;ReadPosRankSum=4.065;VQSLOD=2.0476;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,10:13:17.56:139,18,0	0/0:7,0:7:20.60:0,21,190	0/0:89,0:11:8.14:0,8,85	0/0:88,1:10:18.84:0,19,109	1/1:17,1:17:34.52:278,35,0	1/1:9,1:9:23.75:181,24,0	1/1:6,1:7:17.17:132,17,0	1/1:20,1:21:56.18:408,56,0	1/1:7,0:6:8.84:56,9,0	0/0:12,0:12:27.18:0,27,308	0/0:11,0:11:20.34:0,20,158	1/1:3,0:2:5.88:35,6,0	1/1:4,0:4:2.72:17,3,0	1/1:8,0:5:5.72:30,6,0	1/1:9,0:7:11.81:74,12,0	0/0:8,0:5:14.63:0,15,148	1/1:28,0:27:59.87:374,60,0	1/1:27,0:24:44.18:277,44,0	1/1:20,1:16:18.52:305,19,0	1/1:4,1:6:17.58:124,18,0	1/1:2,2:2:3.01:35,3,0	1/1:3,0:2:5.87:35,6,0	0/1:4,0:3:22.11:28,0,22	1/1:4,0:1:2.96:19,3,0	1/1:19,2:20:35.37:248,35,0	1/1:17,0:17:41.29:285,41,0	1/1:12,0:11:11.77:73,12,0	1/1:6,0:5:11.82:76,12,0
chr10	109226921	.	TA	T	13077.48	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=13.278;DP=792;FS=5.841;HRun=8;HaplotypeScore=78.6364;InbreedingCoeff=0.9991;MQ=77.30;MQ0=0;MQRankSum=-0.983;QD=25.05;ReadPosRankSum=3.153;VQSLOD=5.7092;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,52:57:99:1419,147,0	0/0:13,0:13:36.08:0,36,420	0/0:21,0:21:39.08:0,39,421	0/0:13,0:13:24.06:0,24,275	0/0:30,0:31:78.11:0,78,920	0/0:21,0:21:60.18:0,60,725	0/0:39,0:39:99:0,111,1341	1/1:3,15:18:45.07:434,45,0	0/0:23,0:23:60.18:0,60,725	0/0:32,0:32:87.26:0,87,1041	0/0:17,0:17:48.13:0,48,559	1/1:2,47:49:99:1304,135,0	1/1:1,40:41:99:1100,114,0	1/1:2,35:37:96.15:927,96,0	1/1:7,33:40:93.15:898,93,0	0/0:37,0:37:99:0,111,1330	1/1:1,31:32:90.14:869,90,0	1/1:3,26:29:75.12:724,75,0	1/1:1,20:21:60.09:579,60,0	1/1:1,13:14:39.06:377,39,0	1/1:2,35:37:96.15:927,96,0	1/1:2,24:26:68.98:652,69,0	1/1:2,8:10:21.03:203,21,0	1/1:4,39:43:99:1101,114,0	0/0:23,0:23:66.11:0,66,758	1/1:4,20:24:60.09:579,60,0	1/1:3,27:30:66.10:637,66,0	1/1:2,12:14:36.05:348,36,0
chr10	109227370	.	CTGGGGACG	C	4807.21	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.538;DP=626;FS=12.787;HRun=0;HaplotypeScore=153.7514;InbreedingCoeff=0.9913;MQ=79.35;MQ0=0;MQRankSum=-11.198;QD=54.63;ReadPosRankSum=1.289;VQSLOD=4.0710;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,4967	0/0:13,0:13:36.12:0,36,1574	0/0:21,0:21:60.19:0,60,2026	0/0:13,0:13:24.47:0,24,611	1/1:0,13:11:24.04:640,24,0	1/1:0,13:9:12.04:312,12,0	1/1:0,20:19:45.15:1279,45,0	0/0:18,0:18:54.17:0,54,2019	1/1:0,25:23:63.22:1902,63,0	0/0:26,0:26:78.27:0,78,3370	0/0:11,0:11:33.11:0,33,1427	0/0:30,0:30:90.31:0,90,4055	0/0:35,0:35:99:0,105,4633	0/0:29,0:29:87.30:0,87,3767	0/0:14,0:14:42.13:0,42,1759	0/0:17,0:16:51.18:0,51,2215	0/0:40,0:40:99:0,120,5126	0/0:33,0:33:99:0,99,4424	0/0:17,0:17:51.18:0,51,2160	0/0:18,0:18:48.16:0,48,2204	0/0:56,0:56:99:0,169,7375	0/0:15,0:15:39.13:0,39,1583	0/0:20,0:20:54.01:0,54,2244	0/0:24,0:24:69.24:0,69,3054	1/1:0,17:14:27.01:675,27,0	0/0:27,0:27:78.26:0,78,3409	0/0:12,0:12:33.11:0,33,1515	0/0:10,0:10:30.10:0,30,1364
chr10	109231986	.	G	GCTGT	12573.93	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-13.308;DP=674;FS=0.690;HRun=0;HaplotypeScore=105.7485;InbreedingCoeff=0.9943;MQ=77.16;MQ0=0;MQRankSum=-5.235;QD=62.56;ReadPosRankSum=1.979;VQSLOD=6.5410;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,2375	0/0:9,0:9:27.08:0,27,458	0/0:15,0:15:27.89:0,28,405	0/0:17,0:17:13.40:0,13,505	0/0:17,0:17:45.15:0,45,840	0/0:22,0:22:63.22:0,63,1175	0/0:32,0:32:90.25:0,90,1553	0/0:35,0:35:93.30:0,93,1677	0/0:19,0:19:54.19:0,54,1006	0/0:22,0:22:66.23:0,66,1230	0/0:7,0:7:21.07:0,21,391	1/1:0,31:33:84.29:2234,84,0	1/1:3,25:29:72.25:1906,72,0	1/1:11,24:36:90.31:2371,90,0	1/1:8,24:35:78.27:2074,78,0	0/0:29,0:29:84.29:0,84,1555	0/0:39,0:39:99:0,114,2087	0/0:26,0:26:72.20:0,72,1294	0/0:15,0:15:42.08:0,42,742	0/0:19,0:19:48.16:0,48,896	0/0:32,0:32:93.31:0,93,1706	1/1:4,17:23:45.15:1197,45,0	1/1:1,11:12:33.11:875,33,0	1/1:5,28:33:72.25:1916,72,0	0/0:23,0:23:69.24:0,69,1286	0/0:20,0:20:51.17:0,51,937	0/0:21,0:21:60.19:0,60,1086	0/0:9,0:9:24.08:0,24,447
chr10	109235679	.	C	CCCTT	1166.42	PASS	AB=0.938;AC=19;AF=0.432;AN=44;BaseQRankSum=0.353;DP=232;FS=0.000;HRun=0;HaplotypeScore=62.9438;InbreedingCoeff=-0.1375;MQ=47.34;MQ0=16;MQRankSum=0.781;QD=8.64;ReadPosRankSum=-2.553;VQSLOD=1.5848;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,2:11:3.29:217,0,3	0/0:1,0:1:3.01:0,3,56	./.	0/0:42,0:8:2.35:0,2,56	0/1:8,0:8:10.22:10,0,88	0/1:16,0:15:11.63:12,0,298	0/1:19,0:18:58.90:59,0,261	0/1:5,0:4:9.76:102,0,10	0/1:13,0:13:99:105,0,149	0/0:5,0:5:8.98:0,9,131	0/0:1,0:1:3.01:0,3,56	0/1:6,0:6:25.79:26,0,35	0/0:5,0:4:6:0,6,52	./.	0/0:3,0:3:1.66:0,2,40	0/0:6,0:6:18.05:0,18,309	1/1:5,0:5:9.01:129,9,0	./.	0/1:7,1:8:7:127,0,7	1/1:8,2:10:12.01:157,12,0	1/1:10,1:11:8.69:63,9,0	./.	./.	1/1:2,0:2:2.84:14,3,0	0/1:10,0:10:29.73:30,0,134	0/1:4,1:4:12.98:59,0,13	0/1:4,2:6:7.95:195,0,8	./.
chr10	109235686	.	T	TC	246.12	PASS	AB=0.870;AC=13;AF=0.310;AN=42;BaseQRankSum=4.446;DP=199;FS=3.527;HRun=3;HaplotypeScore=53.0539;InbreedingCoeff=0.0689;MQ=36.65;MQ0=17;MQRankSum=-2.458;QD=4.56;ReadPosRankSum=0.165;VQSLOD=0.4185;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,1:8:6.48:66,6,0	0/0:1,0:1:3.01:0,3,36	./.	0/0:44,0:8:1.39:0,1,88	0/0:6,1:7:12.04:0,12,148	0/0:13,0:12:33.10:0,33,399	0/0:15,0:14:30.67:0,31,369	0/1:5,1:5:26.83:27,0,30	0/0:10,0:10:18.06:0,18,222	0/0:3,0:3:8.86:0,9,89	0/0:2,0:2:6.02:0,6,74	0/1:3,0:3:27.79:41,0,28	./.	./.	1/1:3,0:3:2.97:27,3,0	0/0:5,0:5:15.03:0,15,172	0/0:3,0:3:5.69:0,6,47	./.	0/1:6,0:6:13.97:14,0,30	0/1:7,0:8:24.01:36,0,24	0/1:5,2:7:0.03:0,0,0	./.	./.	1/1:2,1:2:3.01:41,3,0	0/0:9,0:9:21.53:0,22,248	0/1:4,1:4:26.23:28,0,26	0/1:2,3:5:23.61:95,0,24	./.
chr10	109235688	.	C	CCTCCCT	1058.56	PASS	AB=0.838;AC=13;AF=0.310;AN=42;BaseQRankSum=3.246;DP=179;FS=12.238;HRun=0;HaplotypeScore=51.4293;InbreedingCoeff=0.0504;MQ=36.34;MQ0=18;MQRankSum=-1.929;QD=28.61;ReadPosRankSum=0.000;VQSLOD=1.7622;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,1:4:10.78:205,11,0	0/0:1,0:1:3.01:0,3,36	./.	0/0:44,0:8:14.64:0,15,193	0/0:7,0:7:12.04:0,12,267	0/0:13,0:12:33.10:0,33,750	0/0:14,0:14:29.95:0,30,680	0/1:4,0:3:46.93:67,0,47	0/0:8,0:8:18.06:0,18,418	0/0:3,0:3:9.03:0,9,150	0/0:2,0:2:6.02:0,6,107	0/1:2,0:3:26.40:159,0,26	./.	./.	1/1:1,0:2:3.01:63,3,0	0/0:5,0:5:15.05:0,15,379	0/1:3,1:3:40.71:86,0,41	./.	0/1:3,1:4:42.66:92,0,43	0/1:3,2:5:28.32:153,0,28	0/0:3,0:3:0.47:0,0,1	./.	./.	1/1:3,0:2:3.01:41,3,0	0/0:8,0:8:21.06:0,21,411	0/1:3,0:3:38.90:83,0,39	0/1:4,0:4:34.63:245,0,35	./.
chr10	109235691	.	C	CCT	333.44	PASS	AB=0.924;AC=13;AF=0.342;AN=38;BaseQRankSum=4.561;DP=170;FS=12.434;HRun=0;HaplotypeScore=44.8368;InbreedingCoeff=-0.0074;MQ=35.07;MQ0=18;MQRankSum=-1.918;QD=9.01;ReadPosRankSum=-1.102;VQSLOD=1.4748;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,1:4:6.02:98,6,0	./.	./.	0/0:42,0:6:14.41:0,14,190	0/0:6,0:6:9.03:0,9,147	0/0:12,0:11:30.10:0,30,488	0/0:15,0:14:29.84:0,30,488	0/1:4,0:3:33.39:33,0,43	0/0:6,0:6:15.05:0,15,243	0/0:2,0:2:6.02:0,6,86	0/0:2,0:2:6.02:0,6,93	0/1:3,0:3:39.20:39,0,43	./.	./.	1/1:2,0:2:2.92:20,3,0	0/0:6,0:6:18.02:0,18,264	0/1:3,0:2:4.84:5,0,43	./.	0/1:4,0:4:27.65:28,0,43	0/1:5,0:5:38.54:60,0,39	1/1:2,1:3:0.47:1,0,0	./.	./.	./.	0/0:7,0:7:18.06:0,18,272	0/1:3,1:3:39.10:40,0,39	0/1:2,2:4:33.40:134,0,33	./.
chr10	109235699	.	CT	C	84.42	PASS	AB=0.800;AC=11;AF=0.275;AN=40;BaseQRankSum=3.967;DP=161;FS=3.576;HRun=1;HaplotypeScore=36.6862;InbreedingCoeff=0.2389;MQ=33.66;MQ0=22;MQRankSum=-2.678;QD=3.38;ReadPosRankSum=-0.674;VQSLOD=-0.2329;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:2:3.01:31,3,0	./.	./.	0/0:40,0:5:11.70:0,12,116	0/0:6,0:6:8.75:0,9,85	0/0:11,0:10:27.01:0,27,297	0/0:15,0:14:28.19:0,28,265	0/0:3,0:2:4.24:0,4,26	0/0:6,0:6:0.68:0,1,125	0/1:3,0:2:22.68:23,0,31	0/0:1,0:1:3.01:0,3,48	0/1:1,2:3:15.98:30,0,16	./.	./.	1/1:2,1:2:1.17:3,1,0	0/0:5,0:5:14.07:0,14,155	0/0:2,1:2:5.02:0,5,20	./.	0/1:3,1:4:21.20:21,0,30	1/1:1,3:5:8.86:75,9,0	0/0:1,0:1:0:0,0,0	./.	0/0:1,0:1:0:0,0,0	./.	0/0:6,0:6:6.49:0,6,73	1/1:3,0:2:2.94:18,3,0	0/0:1,0:1:3.01:0,3,34	./.
chr10	109235744	.	CTCCG	C	80.34	PASS	AB=1.000;AC=13;AF=0.433;AN=30;BaseQRankSum=-1.390;DP=76;FS=0.000;HRun=0;HaplotypeScore=19.0225;InbreedingCoeff=0.1072;MQ=37.83;MQ0=6;MQRankSum=0.058;QD=2.51;ReadPosRankSum=-1.680;VQSLOD=0.7975;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:13,0:2:3.41:0,3,18	0/0:2,0:2:0:0,0,0	0/0:3,0:3:2.99:0,3,40	0/1:5,0:4:11.24:11,0,55	1/1:2,4:5:11.89:83,12,0	./.	0/0:2,0:2:6.02:0,6,97	./.	1/1:1,0:1:2.96:19,3,0	./.	0/1:1,0:1:0:0,0,0	./.	./.	./.	0/0:2,0:1:2.99:0,3,24	0/0:1,0:1:3.01:0,3,53	0/1:5,0:5:12.33:12,0,17	1/1:7,0:6:2.88:15,3,0	./.	1/1:1,0:1:2.97:20,3,0	./.	./.	0/1:4,0:4:8.70:9,0,86	0/1:2,0:2:3.89:13,0,4	./.
chr10	109237231	.	CTT	C	9077.68	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=8.920;DP=604;FS=5.364;HRun=12;HaplotypeScore=80.3223;InbreedingCoeff=0.9689;MQ=74.12;MQ0=3;MQRankSum=-2.223;QD=23.04;ReadPosRankSum=1.468;VQSLOD=4.7358;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:21:53.63:548,54,0	0/0:11,0:13:29.07:0,29,375	0/0:15,0:9:14.31:0,14,112	0/0:18,0:17:2.30:0,2,189	0/0:24,0:28:80.22:0,80,1082	0/0:24,0:27:64.68:0,65,875	0/0:15,0:16:42.51:0,43,593	1/1:8,32:42:86.60:847,87,0	0/0:14,0:16:42.13:0,42,593	0/0:18,0:21:53.10:0,53,644	0/0:19,0:21:56.64:0,57,758	1/1:4,19:24:50.84:571,51,0	1/1:3,21:24:59.85:591,60,0	1/1:1,15:18:50.59:481,51,0	1/1:2,20:21:51.10:518,51,0	0/0:13,0:13:33.09:0,33,456	1/1:4,15:20:41.81:409,42,0	1/1:2,16:20:50.58:481,51,0	1/1:2,20:22:56.99:579,57,0	1/1:1,24:25:63.07:641,63,0	1/1:1,11:14:38.56:359,39,0	1/1:5,23:28:63.09:641,63,0	1/1:4,15:19:42.06:427,42,0	1/1:7,18:25:55.84:536,56,0	0/0:18,0:21:52.64:0,53,696	1/1:3,18:20:51.10:518,51,0	1/1:5,24:31:56.49:684,56,0	1/1:6,11:17:24.03:244,24,0
chr10	109241066	.	AT	A	8545.24	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=16.740;DP=650;FS=9.356;HRun=1;HaplotypeScore=96.9147;InbreedingCoeff=0.9999;MQ=78.73;MQ0=0;MQRankSum=-1.874;QD=37.32;ReadPosRankSum=4.110;VQSLOD=4.6997;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:99:1402,108,0	0/0:14,0:14:39.12:0,39,593	0/0:26,0:26:66.29:0,66,1124	0/0:25,0:25:75.24:0,75,1142	0/0:27,0:27:81.28:0,81,1277	0/0:16,0:16:48.15:0,48,741	0/0:33,0:33:99:0,99,1556	1/1:0,20:20:60.19:775,60,0	0/0:18,0:18:54.17:0,54,840	0/0:30,0:30:90.31:0,90,1428	0/0:14,0:14:42.14:0,42,667	0/0:30,0:30:84.02:0,84,759	0/0:17,0:17:45:0,45,410	0/0:22,0:22:63.03:0,63,587	0/0:28,0:28:78.04:0,78,712	0/0:25,0:25:69.23:0,69,1095	1/1:1,23:24:69.22:896,69,0	1/1:0,14:14:42.14:545,42,0	1/1:0,12:12:36.12:467,36,0	1/1:0,20:20:57.19:740,57,0	1/1:0,38:38:99:1363,105,0	0/0:24,0:24:65.92:0,66,596	0/0:17,0:17:45.02:0,45,426	0/0:29,0:29:84:0,84,748	0/0:26,0:26:78.27:0,78,1243	1/1:1,32:33:96.28:1227,96,0	1/1:0,16:16:45.15:584,45,0	1/1:0,14:14:42.14:545,42,0
chr10	109241170	.	AC	A	4474.76	PASS	AB=0.833;AC=53;AF=0.981;AN=54;BaseQRankSum=2.177;DP=162;FS=12.561;HRun=1;HaplotypeScore=118.3667;InbreedingCoeff=-0.0617;MQ=49.59;MQ0=0;MQRankSum=-0.966;QD=27.79;ReadPosRankSum=0.980;VQSLOD=3.4179;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,3:4:11.56:102,12,0	1/1:1,1:2:5.99:56,6,0	0/1:4,1:4:23.86:24,0,52	./.	1/1:1,6:7:19.51:182,20,0	1/1:0,2:2:6.02:74,6,0	1/1:0,5:5:13.76:88,14,0	1/1:1,0:1:3.01:42,3,0	1/1:0,7:7:18:206,18,0	1/1:0,7:7:21.07:270,21,0	1/1:0,8:8:20.02:158,20,0	1/1:2,4:6:17.42:196,17,0	1/1:0,3:3:9.03:106,9,0	1/1:2,7:9:26.57:309,27,0	1/1:0,7:7:20.71:212,21,0	1/1:1,8:9:26.75:309,27,0	1/1:1,2:3:9.02:99,9,0	1/1:0,2:2:6.02:76,6,0	1/1:0,1:1:3.01:39,3,0	1/1:0,8:8:17.42:189,17,0	1/1:0,5:5:5.05:47,5,0	1/1:0,10:10:28.56:257,29,0	1/1:0,5:5:10.88:68,11,0	1/1:1,6:7:11.93:98,12,0	1/1:3,10:13:38.15:398,38,0	1/1:1,13:14:38.94:458,39,0	1/1:0,9:9:27.08:335,27,0	1/1:0,2:2:6.02:77,6,0
chr10	109241174	.	AC	A	3035.13	PASS	AB=0.833;AC=51;AF=0.981;AN=52;BaseQRankSum=0.500;DP=139;FS=12.365;HRun=1;HaplotypeScore=118.9950;InbreedingCoeff=-0.0957;MQ=51.91;MQ0=0;MQRankSum=0.068;QD=22.15;ReadPosRankSum=4.003;VQSLOD=2.6494;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:3.48:32,3,0	1/1:0,1:1:3:28,3,0	0/1:4,1:4:29.39:29,0,43	./.	1/1:0,6:6:5.72:100,6,0	1/1:0,2:2:6.01:62,6,0	1/1:0,5:5:5.75:47,6,0	./.	1/1:1,5:6:17.81:160,18,0	1/1:0,6:6:18.03:208,18,0	1/1:0,6:6:2.60:57,3,0	1/1:0,4:4:8.99:94,9,0	1/1:0,3:3:9.02:90,9,0	1/1:0,7:7:17.91:180,18,0	1/1:0,7:7:17.95:167,18,0	1/1:0,8:8:22.29:221,22,0	1/1:0,2:2:6.01:64,6,0	1/1:0,2:2:6.02:69,6,0	1/1:0,1:1:3.01:37,3,0	1/1:0,6:6:16.59:158,17,0	1/1:1,1:2:5.03:29,5,0	1/1:0,10:10:21.96:188,22,0	1/1:0,4:4:3.62:33,4,0	1/1:0,6:6:6.23:56,6,0	1/1:0,10:10:21.71:224,22,0	1/1:0,14:14:38.89:426,39,0	1/1:0,9:9:27.07:291,27,0	1/1:0,2:2:6.02:72,6,0
chr10	109241178	.	AC	A	3228.29	PASS	AB=0.833;AC=51;AF=0.944;AN=54;BaseQRankSum=0.817;DP=137;FS=16.393;HRun=1;HaplotypeScore=117.5457;InbreedingCoeff=0.1329;MQ=51.78;MQ0=0;MQRankSum=-0.678;QD=23.91;ReadPosRankSum=4.185;VQSLOD=2.4422;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:3.01:35,3,0	1/1:0,1:1:3.01:30,3,0	0/1:4,1:4:18.34:18,0,48	0/0:2,0:1:3.01:0,3,37	1/1:0,6:6:5.97:112,6,0	1/1:0,2:2:6.02:69,6,0	1/1:0,5:5:5.77:54,6,0	./.	1/1:0,5:5:14.96:154,15,0	1/1:0,6:6:18.05:220,18,0	1/1:0,6:6:1.50:62,2,0	1/1:0,4:4:8.56:97,9,0	1/1:0,3:3:9.03:103,9,0	1/1:0,7:7:17.72:201,18,0	1/1:0,7:7:18.01:185,18,0	1/1:0,8:8:22.30:237,22,0	1/1:0,2:2:6.02:70,6,0	1/1:0,2:2:6.02:73,6,0	1/1:0,1:1:3.01:38,3,0	1/1:0,6:6:16.60:174,17,0	1/1:0,1:1:2.04:6,2,0	1/1:0,10:10:22.43:205,22,0	1/1:0,4:4:3.74:37,4,0	1/1:0,6:6:5.83:64,6,0	1/1:0,10:10:21.60:242,22,0	1/1:0,14:14:38.95:456,39,0	1/1:0,9:9:27.08:315,27,0	1/1:0,2:2:6.02:73,6,0
chr10	109241182	.	AC	A	3221.02	PASS	AB=0.800;AC=51;AF=0.944;AN=54;BaseQRankSum=0.779;DP=136;FS=16.785;HRun=1;HaplotypeScore=117.0947;InbreedingCoeff=0.1778;MQ=47.19;MQ0=0;MQRankSum=0.337;QD=24.04;ReadPosRankSum=3.412;VQSLOD=2.5198;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:3.01:34,3,0	1/1:0,1:1:3.01:36,3,0	0/1:3,0:3:6.76:7,0,31	0/0:2,0:1:3.01:0,3,41	1/1:0,6:6:6:119,6,0	1/1:0,2:2:6.02:69,6,0	1/1:0,5:5:5.76:54,6,0	./.	1/1:0,5:5:14.07:144,14,0	1/1:0,6:6:18.05:221,18,0	1/1:0,6:6:1.91:60,2,0	1/1:0,4:4:8.65:93,9,0	1/1:0,3:3:9.03:104,9,0	1/1:0,7:7:17.85:200,18,0	1/1:0,7:7:18.01:186,18,0	1/1:0,8:8:22.31:241,22,0	1/1:0,2:2:6.02:70,6,0	1/1:0,2:2:6.02:72,6,0	1/1:0,1:1:3.01:37,3,0	1/1:0,6:6:16.60:173,17,0	1/1:0,1:1:2.04:6,2,0	1/1:0,10:10:22.92:212,23,0	1/1:0,4:4:3.76:37,4,0	1/1:0,6:6:5.95:66,6,0	1/1:0,10:10:21.59:241,22,0	1/1:0,14:14:38.95:457,39,0	1/1:0,9:9:27.08:311,27,0	1/1:0,2:2:6.02:74,6,0
chr10	109241186	.	AC	A	2967.67	PASS	AC=50;AF=0.962;AN=52;BaseQRankSum=-0.041;DP=133;FS=12.455;HRun=1;HaplotypeScore=116.8240;InbreedingCoeff=0.1834;MQ=36.13;MQ0=0;MQRankSum=-0.567;QD=22.83;ReadPosRankSum=1.316;VQSLOD=2.5517;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:3.01:31,3,0	1/1:0,1:1:3.01:32,3,0	./.	0/0:2,0:1:3.01:0,3,32	1/1:0,6:6:6.15:104,6,0	1/1:0,2:2:6.01:62,6,0	1/1:0,5:5:5.56:47,6,0	./.	1/1:0,5:5:14.77:137,15,0	1/1:0,6:6:18.05:217,18,0	1/1:0,6:6:1.34:54,1,0	1/1:0,4:4:8.77:81,9,0	1/1:0,3:3:9.02:96,9,0	1/1:0,7:7:17.78:180,18,0	1/1:0,7:7:17.95:166,18,0	1/1:0,8:8:22.29:222,22,0	1/1:0,2:2:6.01:64,6,0	1/1:0,2:2:6.02:69,6,0	1/1:0,1:1:3.01:37,3,0	1/1:0,6:6:16.59:157,17,0	1/1:0,1:1:2.22:7,2,0	1/1:0,10:10:21.96:190,22,0	1/1:0,4:4:3.43:32,3,0	1/1:0,6:6:6.38:57,6,0	1/1:0,10:10:21.11:218,21,0	1/1:0,14:14:38.85:439,39,0	1/1:0,9:9:27.07:290,27,0	1/1:0,2:2:6.02:72,6,0
chr10	109241190	.	AC	A	3587.27	PASS	AC=50;AF=0.962;AN=52;BaseQRankSum=-0.958;DP=132;FS=11.772;HRun=1;HaplotypeScore=119.2235;InbreedingCoeff=0.2070;MQ=36.23;MQ0=0;MQRankSum=-2.521;QD=27.59;ReadPosRankSum=0.151;VQSLOD=2.1808;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:3.01:37,3,0	1/1:0,1:1:3.01:37,3,0	./.	0/0:1,0:1:3.01:0,3,31	1/1:0,6:6:16.98:152,17,0	1/1:0,2:2:6.02:74,6,0	1/1:0,5:5:6.98:60,7,0	./.	1/1:1,4:5:14.94:163,15,0	1/1:0,6:6:18.06:230,18,0	1/1:0,6:6:9.48:80,9,0	1/1:0,4:4:9.47:96,9,0	1/1:0,3:3:9.03:111,9,0	1/1:0,7:7:18.94:220,19,0	1/1:0,7:7:18.45:187,18,0	1/1:0,8:8:22.29:248,22,0	1/1:0,2:2:6.02:74,6,0	1/1:0,2:2:6.02:76,6,0	1/1:0,1:1:3.01:39,3,0	1/1:0,6:6:17.89:196,18,0	1/1:0,1:1:2.99:24,3,0	1/1:0,10:10:24.52:227,25,0	1/1:0,4:4:5.28:44,5,0	1/1:0,6:6:7.85:75,8,0	1/1:0,10:10:23.17:246,23,0	1/1:0,14:14:39.02:479,39,0	1/1:0,9:9:27.08:335,27,0	1/1:0,2:2:6.02:77,6,0
chr10	109241358	.	A	AGG	2120.43	PASS	AB=0.870;AC=20;AF=0.357;AN=56;BaseQRankSum=10.195;DP=342;FS=3.099;HRun=2;HaplotypeScore=79.6281;InbreedingCoeff=0.7665;MQ=54.28;MQ0=0;MQRankSum=-3.949;QD=15.37;ReadPosRankSum=-3.446;VQSLOD=-0.1849;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,14:23:19.92:331,20,0	0/0:12,0:12:36.12:0,36,585	0/0:12,0:10:25.97:0,26,342	0/0:10,0:10:23.96:0,24,373	0/0:28,0:26:60.17:0,60,930	0/0:8,0:8:24.07:0,24,366	0/0:9,0:9:27.08:0,27,415	1/1:6,5:10:20.57:228,21,0	0/0:9,0:9:9.08:0,9,372	0/0:14,0:14:42.14:0,42,684	0/0:8,0:8:18.01:0,18,246	0/0:10,0:10:21.43:0,21,112	0/0:6,0:6:4.03:0,4,52	0/0:11,0:11:16.44:0,16,78	0/0:10,0:10:24.76:0,25,118	0/0:13,0:13:39.13:0,39,634	1/1:2,5:7:18.90:171,19,0	1/1:5,2:7:14.96:168,15,0	1/1:6,6:5:15.01:185,15,0	0/1:11,6:16:5.74:209,0,6	1/1:3,6:9:2.58:98,3,0	0/1:10,0:10:14.96:15,0,71	0/0:12,0:12:27.73:0,28,132	0/0:16,0:16:5.98:0,6,27	0/0:16,0:16:42.13:0,42,659	1/1:13,11:23:13.32:535,13,0	1/1:3,3:6:9.18:68,9,0	1/1:7,4:11:32.07:315,32,0
chr10	109241359	.	A	AG	738.64	PASS	AB=0.709;AC=14;AF=0.250;AN=56;BaseQRankSum=8.409;DP=352;FS=0.000;HRun=1;HaplotypeScore=81.2885;InbreedingCoeff=0.2516;MQ=55.96;MQ0=0;MQRankSum=-0.009;QD=4.92;ReadPosRankSum=-0.778;VQSLOD=-0.1488;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,14:24:50.69:77,0,51	0/0:12,0:12:36.12:0,36,466	0/0:13,0:11:26.49:0,26,288	0/0:10,0:10:23.91:0,24,286	0/0:29,0:27:63.03:0,63,778	0/0:8,0:8:24.08:0,24,311	0/0:9,0:9:27.09:0,27,350	0/1:6,4:10:11.77:76,0,12	0/0:10,0:10:27.02:0,27,329	0/0:14,0:14:42.14:0,42,544	0/0:8,0:8:18.01:0,18,206	0/0:10,0:10:29.52:0,30,205	0/0:7,0:7:14.63:0,15,99	0/0:11,0:11:21.42:0,21,142	0/0:10,0:10:29.63:0,30,203	0/0:13,0:13:39.13:0,39,505	0/1:4,5:9:6.35:72,0,6	1/1:5,2:7:11.19:78,11,0	1/1:7,5:5:12.83:92,13,0	0/1:11,6:16:41.46:42,0,41	0/1:3,6:9:21.68:40,0,22	0/0:10,0:10:29.41:0,29,189	0/0:12,0:12:29.75:0,30,212	0/1:17,0:17:30.33:30,0,63	0/0:16,0:16:42.13:0,42,533	0/1:14,11:24:17.97:264,0,18	0/1:3,3:6:7.53:28,0,8	1/1:8,4:12:7:105,7,0
chr10	109241992	.	CT	C	9879.39	PASS	AB=0.857;AC=45;AF=0.804;AN=56;BaseQRankSum=2.751;DP=587;FS=3.539;HRun=10;HaplotypeScore=63.5137;InbreedingCoeff=0.8676;MQ=78.39;MQ0=0;MQRankSum=-1.823;QD=19.52;ReadPosRankSum=2.773;VQSLOD=5.8900;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,30:37:55.63:633,56,0	0/1:10,2:12:12.16:12,0,258	0/0:18,0:18:12.19:0,12,192	0/0:11,0:9:23.01:0,23,172	1/1:5,26:31:47.80:644,48,0	1/1:2,24:26:68.97:599,69,0	1/1:1,9:10:26.99:234,27,0	1/1:6,27:33:50.74:659,51,0	1/1:2,11:13:26.99:234,27,0	0/0:17,1:19:12.87:0,13,351	0/0:18,0:20:56.95:0,57,598	1/1:3,15:18:41.99:365,42,0	1/1:1,22:23:62.98:547,63,0	1/1:0,19:19:50.99:443,51,0	1/1:2,10:12:23.98:208,24,0	0/0:13,0:13:33.07:0,33,356	1/1:3,27:30:71.98:625,72,0	1/1:3,7:10:20.99:182,21,0	1/1:7,20:27:29.79:487,30,0	1/1:4,24:28:62.96:547,63,0	1/1:1,13:14:35.99:312,36,0	1/1:6,10:16:9.35:191,9,0	1/1:2,23:25:56.98:495,57,0	1/1:1,20:21:53.99:469,54,0	1/1:1,29:30:74.98:651,75,0	1/1:5,22:27:35.77:535,36,0	1/1:3,20:23:50.97:442,51,0	1/1:6,15:21:41.98:364,42,0
chr10	109246746	.	CT	C	11950.76	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=12.741;DP=693;FS=11.559;HRun=6;HaplotypeScore=71.9476;InbreedingCoeff=0.9987;MQ=90.69;MQ0=0;MQRankSum=-4.026;QD=28.25;ReadPosRankSum=3.968;VQSLOD=4.8374;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,37:40:99:1096,102,0	0/0:14,0:14:42.14:0,42,553	0/0:29,0:29:75.24:0,75,959	0/0:28,0:28:63.12:0,63,765	0/0:22,0:22:60.20:0,60,790	0/0:33,0:33:99:0,99,1288	0/0:33,0:33:84.27:0,84,1104	1/1:2,22:24:66.12:692,66,0	0/0:24,0:24:72.23:0,72,947	0/0:23,0:23:66.17:0,66,817	0/0:24,0:24:66.20:0,66,853	1/1:2,20:22:57.14:613,57,0	1/1:0,27:27:78.20:838,78,0	1/1:2,18:20:45.11:484,45,0	1/1:1,21:22:57.13:613,57,0	0/0:21,0:21:54.18:0,54,711	1/1:2,26:28:72.18:774,72,0	1/1:1,28:29:84.21:903,84,0	1/1:1,13:14:36.06:377,36,0	1/1:1,20:21:57.14:612,57,0	1/1:0,53:53:99:1677,156,0	1/1:2,14:16:36.09:387,36,0	1/1:1,20:21:54.13:580,54,0	1/1:1,29:30:72.18:774,72,0	0/0:19,0:19:54.18:0,54,707	1/1:2,20:22:17.65:534,18,0	1/1:0,22:22:57.12:612,57,0	1/1:0,12:12:36.09:387,36,0
chr10	109248153	.	C	CCA	225.33	PASS	AC=2;AF=0.111;AN=18;BaseQRankSum=-0.061;DP=245;FS=0.000;HRun=0;HaplotypeScore=8.4856;MQ=10.79;MQ0=213;MQRankSum=0.796;QD=16.10;ReadPosRankSum=-0.674;VQSLOD=2.6196;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:3:3.01:0,3,49	./.	./.	./.	./.	./.	1/1:2,12:7:15.05:303,15,0	./.	./.	./.	./.	./.	./.	0/0:5,0:1:3.01:0,3,49	./.	0/0:6,1:3:9.03:0,9,146	0/0:16,0:3:3.01:0,3,48	./.	0/0:6,0:1:3.01:0,3,49	0/0:5,0:1:3.01:0,3,48	0/0:15,0:2:3.01:0,3,49	./.	./.	./.	./.	0/0:13,0:1:3.01:0,3,49	./.	./.
chr10	109249255	.	C	CCA	887.39	PASS	AB=1.000;AC=11;AF=0.239;AN=46;BaseQRankSum=1.062;DP=346;FS=0.000;HRun=0;HaplotypeScore=28.7381;InbreedingCoeff=0.6559;MQ=20.65;MQ0=211;MQRankSum=-1.971;QD=13.05;ReadPosRankSum=-1.897;VQSLOD=2.6250;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:5:3.01:0,3,49	0/0:3,0:3:9.03:0,9,146	./.	./.	1/1:0,14:6:11.85:242,12,0	1/1:1,9:5:6.02:121,6,0	1/1:0,10:5:12.04:243,12,0	0/0:6,0:1:3.01:0,3,49	1/1:3,14:5:9.03:182,9,0	0/0:16,0:3:9.03:0,9,147	0/0:10,0:4:3.01:0,3,49	0/0:11,0:9:15.05:0,15,243	0/0:9,0:6:9.03:0,9,135	0/0:21,0:14:18.06:0,18,292	0/0:14,0:9:12.04:0,12,195	0/0:8,0:5:9.03:0,9,146	0/1:9,0:3:0:0,0,0	0/0:15,0:2:3.01:0,3,49	0/0:12,0:7:21.07:0,21,342	0/0:8,0:2:3.01:0,3,49	./.	0/0:21,0:10:17.99:0,18,261	0/0:14,0:8:11.96:0,12,163	./.	1/1:0,7:8:12.04:243,12,0	0/0:19,0:7:21.05:0,21,316	0/0:12,0:6:11.96:0,12,163	./.
chr10	109249316	.	C	CCACACACACA	1351.63	PASS	AB=1.000;AC=28;AF=0.824;AN=34;BaseQRankSum=-1.897;DP=335;FS=0.000;HRun=0;HaplotypeScore=61.1745;InbreedingCoeff=0.2709;MQ=22.55;MQ0=96;MQRankSum=0.211;QD=6.17;ReadPosRankSum=0.913;VQSLOD=1.3658;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:7:0.26:0,0,0	./.	./.	./.	0/1:20,0:5:0:0,0,0	./.	0/1:17,0:12:0:0,0,0	1/1:15,0:7:9.03:272,9,0	0/1:12,0:6:0:0,0,0	1/1:15,0:4:3.01:114,3,0	./.	1/1:16,3:17:4.49:294,4,0	1/1:14,0:7:6.02:236,6,0	1/1:14,1:11:3.01:148,3,0	1/1:19,0:9:3:25,3,0	1/1:7,0:5:3.01:86,3,0	./.	1/1:8,0:3:1.55:4,2,0	./.	./.	1/1:10,0:6:0.47:1,0,0	./.	1/1:19,0:8:0.47:1,0,0	0/1:12,0:5:0:0,0,0	./.	1/1:11,0:5:6.02:121,6,0	1/1:5,0:3:3.01:120,3,0	./.
chr10	109249795	.	TCATA	T	3103.04	PASS	AB=0.816;AC=16;AF=0.320;AN=50;BaseQRankSum=12.357;DP=724;FS=2.887;HRun=0;HaplotypeScore=111.8626;InbreedingCoeff=0.8309;MQ=65.75;MQ0=7;MQRankSum=1.030;QD=11.80;ReadPosRankSum=-0.272;VQSLOD=3.1695;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,14:44:27.09:416,27,0	0/0:8,0:8:18.06:0,18,419	./.	./.	0/0:28,0:28:45.15:0,45,1047	0/0:15,0:15:21.07:0,21,486	0/0:26,0:26:27.08:0,27,526	./.	0/0:26,0:26:16.73:0,17,1183	0/0:27,0:27:48.15:0,48,1027	0/0:14,0:14:30.10:0,30,697	0/0:31,0:31:48.16:0,48,1093	0/0:28,0:28:60.21:0,60,1377	0/0:28,0:28:57.20:0,57,1312	0/0:29,0:29:54.19:0,54,1245	0/0:37,1:38:32.05:0,32,1700	1/1:20,14:33:27.09:416,27,0	1/1:9,10:19:21.07:323,21,0	1/1:20,6:25:18.04:254,18,0	1/1:7,20:27:53.95:681,54,0	0/1:32,2:34:1.05:1,0,894	0/0:19,0:19:24.08:0,24,554	0/0:15,0:15:18.06:0,18,362	0/0:23,0:23:39.13:0,39,875	0/0:27,1:28:7.98:0,8,1146	0/1:23,19:42:10.11:747,0,10	1/1:14,12:26:21.07:312,21,0	1/1:6,4:10:9.03:139,9,0
chr10	109250592	.	T	TCAGCACCAGAG	29460.24	PASS	AB=0.680;AC=33;AF=0.589;AN=56;BaseQRankSum=1.662;DP=621;FS=14.121;HRun=0;HaplotypeScore=233.3928;InbreedingCoeff=0.9131;MQ=85.91;MQ0=0;MQRankSum=-17.651;QD=81.83;ReadPosRankSum=-1.007;VQSLOD=2.8989;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,8:28:30.80:1187,31,0	0/0:10,0:10:30.10:0,30,999	0/0:34,0:34:84.76:0,85,2560	0/0:36,0:34:67.77:0,68,2046	0/0:28,0:28:75.26:0,75,2633	0/0:11,0:11:33.11:0,33,1130	0/0:32,0:32:84.29:0,84,2797	1/1:27,1:28:63.21:2781,63,0	0/0:29,0:29:87.30:0,87,2798	0/0:26,0:26:75.25:0,75,2485	0/0:19,0:19:54.19:0,54,1738	1/1:13,10:26:63.22:3243,63,0	1/1:8,8:17:42.14:2017,42,0	1/1:12,8:24:44.76:2058,45,0	1/1:21,8:29:57.18:2372,57,0	0/0:22,0:22:63.22:0,63,2065	1/1:10,12:24:60.21:2939,60,0	1/1:8,5:13:30.10:1603,30,0	1/1:16,3:19:41.99:1381,42,0	1/1:8,14:25:26.70:1399,27,0	1/1:22,8:33:33.88:1627,34,0	1/1:10,5:15:14.56:564,15,0	1/1:8,9:18:27.09:1302,27,0	1/1:14,6:23:15.52:759,16,0	0/0:14,0:14:39.13:0,39,1318	0/1:9,8:17:99:2097,0,167	1/1:8,4:17:33.09:1637,33,0	1/1:2,2:4:9.03:496,9,0
chr10	109253608	.	AGTGTGTGTGTGTGTGTGTGTGTGT	A	5317.64	PASS	AB=1.000;AC=27;AF=0.519;AN=52;BaseQRankSum=1.385;DP=570;FS=2.230;HRun=0;HaplotypeScore=263.2726;InbreedingCoeff=0.4830;MQ=56.00;MQ0=32;MQRankSum=-3.469;QD=15.11;ReadPosRankSum=0.578;VQSLOD=3.4433;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:30:73.87:189,0,74	0/0:10,0:9:12.91:0,13,515	./.	0/0:31,0:18:9.48:0,9,102	0/0:12,0:13:13.27:0,13,208	0/0:16,0:14:4.57:0,5,76	0/0:22,0:21:23.09:0,23,383	1/1:20,0:20:8.04:269,8,0	0/0:20,0:20:6:0,6,96	0/0:17,0:15:18.05:0,18,509	0/0:16,0:16:15.04:0,15,745	1/1:25,0:26:11.73:485,12,0	1/1:22,0:21:13.50:405,14,0	0/1:23,0:22:0.79:324,0,1	1/1:27,0:27:6.02:250,6,0	0/0:12,0:11:27.07:0,27,1363	0/1:22,0:21:99:419,0,328	1/1:21,0:21:30.06:940,30,0	1/1:7,3:9:0.87:72,1,0	1/1:20,0:19:5.89:123,6,0	1/1:52,0:51:20.20:288,20,0	1/1:7,3:8:2.87:15,3,0	./.	0/1:30,0:30:19.89:540,0,20	0/0:12,0:13:15.03:0,15,280	1/1:16,0:16:24.01:576,24,0	1/1:14,0:14:12.04:388,12,0	0/1:8,0:8:11.98:34,0,12
chr10	109253631	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTC	G	6046.39	PASS	AB=0.870;AC=27;AF=0.519;AN=52;BaseQRankSum=1.601;DP=504;FS=2.792;HRun=0;HaplotypeScore=184.7545;InbreedingCoeff=0.5117;MQ=45.71;MQ0=55;MQRankSum=-3.092;QD=20.57;ReadPosRankSum=2.937;VQSLOD=3.7884;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:16:73.87:189,0,74	0/0:11,0:10:16.39:0,16,660	./.	0/0:16,0:4:9.01:0,9,101	0/0:18,0:16:19.16:0,19,605	0/0:22,0:19:6.96:0,7,121	0/0:29,0:23:24.45:0,24,385	1/1:13,0:10:8.04:269,8,0	0/0:27,0:26:11.05:0,11,137	0/0:21,0:18:54.18:0,54,2631	0/0:14,0:14:24.07:0,24,1236	1/1:2,22:24:14.66:778,15,0	1/1:4,23:25:13.40:547,13,0	0/1:4,35:37:0.79:466,0,1	1/1:1,25:26:6.02:345,6,0	0/0:16,0:15:34.03:0,34,1775	0/1:11,0:13:99:473,0,344	1/1:14,0:12:30.06:940,30,0	1/1:8,0:6:0.87:72,1,0	1/1:3,0:22:5.89:128,6,0	1/1:31,0:27:20.20:288,20,0	1/1:9,0:5:2.87:15,3,0	./.	0/1:24,0:20:20.37:540,0,20	0/0:13,0:10:27.08:0,27,697	1/1:14,0:12:24.01:576,24,0	1/1:6,0:4:12.04:388,12,0	0/1:4,0:3:11.98:34,0,12
chr10	109253647	.	G	GTC	146.80	PASS	AB=0.970;AC=4;AF=0.080;AN=50;BaseQRankSum=0.259;DP=545;FS=0.000;HRun=0;HaplotypeScore=137.1891;InbreedingCoeff=0.2038;MQ=44.58;MQ0=49;MQRankSum=2.272;QD=2.37;ReadPosRankSum=-2.031;VQSLOD=1.7006;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:38:29.15:0,29,226	0/0:10,0:9:11.79:0,12,98	./.	./.	1/1:16,1:15:5.38:86,5,0	0/0:9,16:22:2.60:0,3,10	0/1:29,2:25:23.37:152,0,23	0/0:16,0:12:20.72:0,21,137	0/0:10,16:25:4.19:0,4,21	0/0:21,0:18:50.61:0,51,397	0/0:15,0:15:24:0,24,258	0/0:25,0:25:14.35:0,14,82	0/0:26,0:23:8.52:0,9,44	0/0:37,0:35:8.65:0,9,45	0/0:25,0:25:5.75:0,6,29	0/0:16,0:15:32.59:0,33,343	0/0:20,0:19:27.75:0,28,183	0/0:14,0:12:30.32:0,30,158	0/0:6,0:4:2.98:0,3,22	0/0:23,0:22:2.88:0,3,15	0/0:40,0:35:10.08:0,10,84	0/0:11,0:8:5.83:0,6,49	0/0:12,0:11:11.72:0,12,96	0/0:29,0:24:18.98:0,19,128	0/1:14,0:11:3.32:3,0,151	0/0:23,0:21:34.55:0,35,213	0/0:12,0:10:19.74:0,20,124	./.
chr10	109253657	.	GTCTGTC	G	2481.28	PASS	AB=1.000;AC=17;AF=0.315;AN=54;BaseQRankSum=-3.790;DP=582;FS=12.371;HRun=0;HaplotypeScore=141.9385;InbreedingCoeff=0.4336;MQ=45.61;MQ0=44;MQRankSum=2.500;QD=9.93;ReadPosRankSum=-3.432;VQSLOD=0.8469;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:38:25.05:466,25,0	0/0:9,0:8:6.90:0,7,82	0/0:4,0:2:4.97:0,5,18	0/0:4,0:1:2.98:0,3,22	0/0:17,0:15:15.12:0,15,257	0/0:24,0:21:6.01:0,6,80	0/0:33,0:28:28.40:0,28,624	1/1:11,13:20:38.93:483,39,0	0/0:29,0:28:11.93:0,12,191	0/0:21,0:18:40.19:0,40,721	0/0:14,0:14:21.06:0,21,280	0/0:25,0:25:9.83:0,10,74	0/1:27,0:24:23.79:24,0,52	0/0:37,0:35:9.01:0,9,86	0/0:25,0:25:5.22:0,5,35	0/0:19,0:18:34.34:0,34,648	0/1:21,0:20:21.23:334,0,21	0/1:15,0:13:99:224,0,140	0/1:9,0:6:0:0,0,0	0/0:23,0:22:2.92:0,3,17	1/1:41,0:36:17.22:290,17,0	0/1:19,0:15:2.38:2,0,6	1/1:15,0:14:0.92:45,1,0	0/0:32,0:27:4.86:0,5,37	0/0:13,0:10:21.30:0,21,391	1/1:8,19:25:14.57:509,15,0	1/1:11,0:9:2.23:268,2,0	./.
chr10	109254577	.	G	GGAAGAATCTATCAGGGTTTA	34527.80	PASS	AB=0.657;AC=54;AF=0.964;AN=56;BaseQRankSum=-0.539;DP=210;FS=53.234;HRun=0;HaplotypeScore=200.5122;InbreedingCoeff=-0.0523;MQ=58.92;MQ0=0;MQRankSum=-3.297;QD=164.42;ReadPosRankSum=2.333;VQSLOD=2.8166;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:15.05:566,15,0	1/1:3,0:3:9.03:598,9,0	0/1:2,1:6:49.76:864,0,50	0/1:3,0:5:21.55:285,0,22	1/1:14,0:14:24.55:1872,25,0	1/1:10,0:10:24.08:1633,24,0	1/1:10,0:10:30.10:1650,30,0	1/1:10,0:10:30.10:1460,30,0	1/1:5,0:5:15.05:1138,15,0	1/1:8,0:8:24.08:1401,24,0	1/1:4,0:4:12.04:896,12,0	1/1:14,0:14:36.12:2952,36,0	1/1:8,0:8:21.07:1136,21,0	1/1:9,0:9:24.08:1513,24,0	1/1:5,0:5:12.04:913,12,0	1/1:10,0:10:30.10:2281,30,0	1/1:7,0:7:18.06:1153,18,0	1/1:4,0:4:12.04:732,12,0	1/1:6,0:6:18.04:1008,18,0	1/1:11,0:11:30.10:2287,30,0	1/1:4,0:4:9.03:577,9,0	1/1:8,0:8:21.07:1402,21,0	1/1:8,0:8:21.06:1203,21,0	1/1:5,0:5:9.03:216,9,0	1/1:7,0:7:18.06:1626,18,0	1/1:10,0:10:27.09:1837,27,0	1/1:8,0:8:18.06:887,18,0	1/1:4,0:4:9.03:442,9,0
chr10	109255548	.	G	GAGAT	4296.47	PASS	AB=0.897;AC=31;AF=0.596;AN=52;BaseQRankSum=-3.257;DP=645;FS=13.749;HRun=0;HaplotypeScore=187.4885;InbreedingCoeff=0.6369;MQ=54.17;MQ0=2;MQRankSum=-1.426;QD=10.40;ReadPosRankSum=-3.936;VQSLOD=2.5450;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:30:3.62:11,4,0	1/1:2,10:13:21.07:488,21,0	./.	./.	1/1:29,0:29:1.03:380,1,0	0/1:16,0:16:70.56:131,0,71	0/1:20,0:20:0.11:0,0,0	1/1:25,0:25:1.25:3,1,0	0/0:24,0:24:38.99:0,39,516	1/1:14,10:26:36.09:742,36,0	1/1:22,0:34:2.86:48,3,0	0/0:17,0:17:18.02:0,18,168	0/0:24,0:24:21.02:0,21,193	0/0:25,0:25:41.83:0,42,363	0/0:28,0:28:42:0,42,376	0/1:11,9:20:99:452,0,128	1/1:18,0:18:3.41:19,3,0	1/1:18,0:18:23.89:220,24,0	1/1:24,0:22:17.99:238,18,0	1/1:38,0:38:8.50:127,8,0	1/1:18,0:18:8.99:119,9,0	0/0:19,0:22:21.03:0,21,211	0/0:21,0:21:31.28:0,31,285	0/0:24,0:24:36.05:0,36,341	0/0:27,0:27:39.13:0,39,593	1/1:29,6:37:51.13:832,51,0	1/1:39,0:40:32.59:434,33,0	1/1:6,0:6:3.01:52,3,0
chr10	109255594	.	GATA	G	1572.72	PASS	AB=0.711;AC=7;AF=0.125;AN=56;BaseQRankSum=9.167;DP=722;FS=19.496;HRun=0;HaplotypeScore=201.5937;InbreedingCoeff=-0.1541;MQ=56.33;MQ0=5;MQRankSum=2.592;QD=8.99;ReadPosRankSum=2.919;VQSLOD=1.8716;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:6.49:0,6,127	0/0:12,0:12:24.08:0,24,432	0/0:10,0:8:18.06:0,18,234	0/0:13,0:10:12.04:0,12,156	0/0:36,0:36:85.19:0,85,643	0/0:15,0:15:41.23:0,41,356	0/0:20,0:20:32.19:0,32,240	0/0:44,0:40:99:0,116,818	0/0:29,0:29:81.21:0,81,743	0/0:32,0:32:90.30:0,90,1465	0/0:31,0:31:44.71:0,45,655	0/1:10,6:16:99:135,0,128	0/1:16,8:24:99:153,0,172	0/1:9,14:23:77.78:349,0,78	0/1:17,14:31:99:377,0,132	0/0:21,0:21:54.17:0,54,990	0/0:15,0:15:17.82:0,18,120	0/0:30,0:30:61.10:0,61,805	0/0:23,0:18:52.81:0,53,619	0/0:44,0:44:56.10:0,56,559	0/0:16,0:16:32.41:0,32,336	0/1:17,10:27:82.57:148,0,83	0/1:16,9:25:99:243,0,100	0/1:18,11:29:99:298,0,127	0/0:32,0:32:85.58:0,86,822	0/0:45,0:45:99:0,127,1562	0/0:37,0:37:79.70:0,80,1051	0/0:9,0:9:6.02:0,6,132
chr10	109255596	.	T	TGG	290.37	PASS	AB=0.817;AC=3;AF=0.054;AN=56;BaseQRankSum=-0.607;DP=727;FS=2.933;HRun=0;HaplotypeScore=200.1786;InbreedingCoeff=-0.0672;MQ=56.42;MQ0=3;MQRankSum=2.118;QD=4.15;ReadPosRankSum=-2.868;VQSLOD=2.0594;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:6.46:0,6,50	0/0:12,0:12:21.33:0,21,132	0/0:11,0:8:18.06:0,18,294	0/0:13,0:10:12.04:0,12,196	0/1:24,12:36:99:285,0,143	0/1:10,5:15:86.87:87,0,98	0/1:18,1:19:17.38:17,0,74	0/0:51,0:47:99:0,118,747	0/0:31,0:31:80.59:0,81,409	0/0:31,0:31:85.87:0,86,1083	0/0:32,0:32:44.78:0,45,682	0/0:17,0:17:49.89:0,50,316	0/0:23,0:23:13.04:0,13,321	0/0:23,0:23:40.36:0,40,329	0/0:32,0:32:78.48:0,78,474	0/0:19,0:19:46.91:0,47,539	0/0:15,0:15:20.15:0,20,128	0/0:30,0:30:78.24:0,78,616	0/0:19,0:16:46.45:0,46,348	0/0:44,0:44:55.71:0,56,394	0/0:16,0:16:32.16:0,32,212	0/0:27,0:27:33.96:0,34,206	0/0:24,0:24:55.86:0,56,352	0/0:29,0:29:17.48:0,17,398	0/0:33,0:33:76.57:0,77,376	0/0:48,0:48:99:0,126,928	0/0:35,0:35:71.23:0,71,566	0/0:9,0:9:5.99:0,6,49
chr10	109255597	.	A	AGATAGATAGATG	10289.49	PASS	AB=0.977;AC=33;AF=0.589;AN=56;BaseQRankSum=-9.472;DP=737;FS=9.582;HRun=0;HaplotypeScore=290.1933;InbreedingCoeff=0.1255;MQ=56.44;MQ0=3;MQRankSum=-2.021;QD=16.76;ReadPosRankSum=-2.973;VQSLOD=1.9094;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,21:35:1.46:0,1,11	0/0:12,0:12:22.91:0,23,124	0/0:11,0:8:17.87:0,18,186	0/0:14,0:10:12.04:0,12,145	1/1:23,0:35:34.89:408,35,0	0/1:10,0:15:99:178,0,103	1/1:18,0:19:32.90:282,33,0	1/1:51,0:47:99:1109,129,0	0/1:31,0:31:99:368,0,726	0/1:32,0:32:44.26:44,0,498	0/0:32,0:32:35.68:0,36,296	0/1:18,0:18:99:218,0,266	0/1:23,0:23:99:262,0,302	0/1:23,0:23:99:137,0,499	0/1:32,0:32:99:313,0,591	0/0:18,0:18:47.21:0,47,510	1/1:15,0:15:25.70:378,26,0	1/1:29,0:29:82.01:912,82,0	1/1:19,0:16:45.03:734,45,0	1/1:44,0:44:50.27:592,50,0	1/1:17,0:17:32.97:412,33,0	0/1:27,0:27:97.14:97,0,333	0/1:24,0:24:99:151,0,488	0/1:29,0:29:99:282,0,627	0/1:34,0:34:99:352,0,837	1/1:47,0:47:71.31:1524,71,0	1/1:34,0:35:74.97:1419,75,0	1/1:1,0:15:3.01:118,3,0
chr10	109255904	.	C	CCTGTTTAGCT	46452.69	PASS	AB=0.646;AC=33;AF=0.589;AN=56;BaseQRankSum=-6.038;DP=724;FS=0.608;HRun=0;HaplotypeScore=191.9174;InbreedingCoeff=0.9202;MQ=71.83;MQ0=0;MQRankSum=-19.816;QD=107.03;ReadPosRankSum=-1.708;VQSLOD=4.6565;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,19:47:99:4606,102,0	0/0:6,0:6:18.06:0,18,586	0/0:33,0:33:90.23:0,90,2448	0/0:22,0:22:54.14:0,54,1566	0/0:38,0:38:99:0,108,3258	0/0:30,0:30:84.29:0,84,2713	0/0:23,0:23:69.19:0,69,1907	1/1:25,9:35:99:4537,102,0	0/0:24,0:24:66.21:0,66,2080	0/0:28,0:28:75.20:0,75,2196	0/0:23,0:23:66.23:0,66,2116	1/1:10,15:28:60.16:2938,60,0	1/1:9,10:23:60.16:2715,60,0	1/1:7,11:20:48.12:2373,48,0	1/1:13,23:36:93.28:4719,93,0	0/0:28,0:28:78.25:0,78,2373	1/1:8,11:20:35.72:1630,36,0	1/1:8,6:16:24.04:994,24,0	1/1:13,8:23:57.10:2117,57,0	1/1:9,17:30:84.21:3621,84,0	1/1:3,4:8:12:413,12,0	1/1:10,15:29:63.17:3080,63,0	1/1:7,9:17:47.91:1664,48,0	1/1:9,12:23:51.13:2363,51,0	0/0:35,0:34:99:0,99,2915	0/1:14,14:31:99:3498,0,111	1/1:8,21:32:84.20:3946,84,0	1/1:5,3:13:24.08:1240,24,0
chr10	109257329	.	TGGGCA	T	23956.51	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=17.623;DP=690;FS=0.000;HRun=0;HaplotypeScore=174.3714;InbreedingCoeff=0.9988;MQ=67.95;MQ0=0;MQRankSum=-17.711;QD=54.20;ReadPosRankSum=2.631;VQSLOD=4.9226;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,46:46:99:2644,114,0	0/0:7,0:7:21.07:0,21,700	0/0:10,0:11:24.08:0,24,574	0/0:18,0:17:42.14:0,42,937	0/0:31,0:31:87.30:0,87,2775	0/0:21,0:20:60.21:0,60,1870	0/0:41,0:41:99:0,123,3708	1/1:0,23:23:69.21:1445,69,0	0/0:23,0:23:69.20:0,69,2078	0/0:28,0:28:84.29:0,84,2641	0/0:21,0:21:60.21:0,60,1997	1/1:0,36:36:90.31:2088,90,0	1/1:0,21:21:57.20:1322,57,0	1/1:0,32:32:84.29:1954,84,0	1/1:0,25:25:66.23:1513,66,0	0/0:17,0:17:51.17:0,51,1582	1/1:0,27:27:60.14:1367,60,0	1/1:0,15:15:27.09:625,27,0	1/1:0,22:22:66.22:1441,66,0	1/1:0,31:31:72.25:1647,72,0	1/1:0,24:24:39.13:869,39,0	1/1:0,25:25:54.19:1229,54,0	1/1:0,19:19:51.18:1186,51,0	1/1:0,25:25:27.29:629,27,0	0/0:30,0:30:90.31:0,90,2894	1/1:0,25:25:75.26:1716,75,0	1/1:0,33:33:66.23:1536,66,0	1/1:0,13:13:33.11:745,33,0
chr10	109259407	.	A	AGTCAGGACACTCCAGTGTGA	33136.68	PASS	AB=0.667;AC=55;AF=0.982;AN=56;BaseQRankSum=0.202;DP=299;FS=18.579;HRun=0;HaplotypeScore=323.6415;InbreedingCoeff=-0.0327;MQ=57.32;MQ0=0;MQRankSum=-2.401;QD=110.83;ReadPosRankSum=1.545;VQSLOD=3.5845;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:13.43:807,13,0	1/1:7,0:7:18.06:911,18,0	1/1:3,0:4:5.76:518,6,0	0/1:3,1:6:3.28:1015,0,3	1/1:8,0:8:3.01:209,3,0	1/1:17,0:17:24.08:1733,24,0	1/1:11,0:11:29.93:1370,30,0	1/1:16,0:16:45.15:2154,45,0	1/1:11,0:11:24.08:1685,24,0	1/1:11,0:11:27.09:957,27,0	1/1:7,0:7:12.03:680,12,0	1/1:16,0:16:36.12:2382,36,0	1/1:10,0:10:15.05:743,15,0	1/1:13,0:13:27.09:1875,27,0	1/1:13,0:13:39.13:2599,39,0	1/1:8,0:8:18.06:1097,18,0	1/1:11,0:11:21.07:1414,21,0	1/1:8,0:8:15.05:959,15,0	1/1:9,0:9:21.06:831,21,0	1/1:14,0:14:25:1342,25,0	1/1:13,0:13:18.49:779,18,0	1/1:9,0:9:12.04:686,12,0	1/1:18,0:18:29.94:1334,30,0	1/1:8,0:8:5.98:119,6,0	1/1:8,0:8:18.06:1348,18,0	1/1:11,0:11:27.09:1375,27,0	1/1:15,0:15:27.09:1393,27,0	1/1:5,0:5:15.05:821,15,0
chr10	109263573	.	A	AGT	1474.16	PASS	AB=0.808;AC=45;AF=0.865;AN=52;BaseQRankSum=-0.199;DP=675;FS=16.060;HRun=0;HaplotypeScore=135.0573;InbreedingCoeff=0.1078;MQ=55.90;MQ0=12;MQRankSum=-0.073;QD=2.59;ReadPosRankSum=-0.871;VQSLOD=1.7394;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:36:3:26,3,0	0/1:3,6:9:4.52:78,0,5	./.	./.	1/1:18,0:17:6.48:68,6,0	1/1:29,0:27:15.49:163,15,0	0/0:29,0:29:2.71:0,3,22	1/1:24,0:23:1.36:3,1,0	1/1:18,0:22:2.94:22,3,0	1/1:25,0:25:8.82:45,9,0	1/1:8,2:10:8.97:110,9,0	1/1:26,0:26:2.92:20,3,0	1/1:23,0:23:5.94:65,6,0	1/1:21,0:20:5.96:44,6,0	0/1:15,0:15:7.91:38,0,8	0/1:22,6:28:35.61:117,0,36	1/1:22,0:22:2.99:24,3,0	1/1:23,0:22:2.99:24,3,0	1/1:15,0:15:0.47:1,0,0	1/1:16,0:16:5.74:38,6,0	1/1:55,0:53:21.04:165,21,0	1/1:16,0:14:8.53:61,9,0	0/0:22,0:19:0:0,0,0	1/1:43,0:41:0.54:140,1,0	1/1:20,0:20:11.50:88,12,0	1/1:27,0:27:9.94:78,10,0	1/1:27,0:27:11.97:97,12,0	1/1:17,0:16:8.95:66,9,0
chr10	109263613	.	T	TGTGTGT	2673.49	PASS	AB=1.000;AC=46;AF=0.885;AN=52;BaseQRankSum=-0.851;DP=622;FS=13.705;HRun=0;HaplotypeScore=152.4381;InbreedingCoeff=0.2652;MQ=53.36;MQ0=6;MQRankSum=-0.718;QD=4.83;ReadPosRankSum=-0.492;VQSLOD=2.0122;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:41:3.01:39,3,0	0/0:10,0:10:0.27:0,0,20	./.	./.	1/1:20,0:18:9.02:171,9,0	1/1:21,0:19:15.94:310,16,0	0/0:26,0:26:2.32:0,2,22	1/1:22,0:22:7.99:20,8,0	1/1:20,0:19:2.59:89,3,0	1/1:20,0:20:9.21:46,9,0	1/1:14,0:14:1.87:21,2,0	1/1:31,0:30:2.96:20,3,0	1/1:18,0:18:6.50:107,6,0	1/1:22,0:21:5.93:44,6,0	1/1:24,0:24:5.96:53,6,0	0/1:18,0:18:4.33:4,0,96	1/1:21,0:20:5.50:95,5,0	1/1:20,0:19:3.47:30,3,0	1/1:11,0:11:1.77:4,2,0	1/1:19,0:19:3:78,3,0	1/1:51,0:50:24.04:377,24,0	1/1:16,0:15:9.01:153,9,0	0/1:27,0:24:0:1,0,0	1/1:38,0:37:24.42:305,24,0	1/1:13,4:18:14.94:182,15,0	1/1:20,0:20:13.77:181,14,0	1/1:22,0:22:13.86:307,14,0	1/1:19,0:19:10.70:146,11,0
chr10	109264261	.	C	CTCTGGCCA	11466.30	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-3.955;DP=531;FS=87.456;HRun=0;HaplotypeScore=152.6891;InbreedingCoeff=0.9072;MQ=71.64;MQ0=0;MQRankSum=-11.806;QD=34.85;ReadPosRankSum=-1.970;VQSLOD=1.0378;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,15:32:27.09:988,27,0	0/0:12,0:12:24.04:0,24,463	0/0:14,0:14:9.01:0,9,86	0/0:15,0:15:11.99:0,12,183	0/0:14,0:14:27.09:0,27,634	0/0:18,0:18:33.10:0,33,790	0/0:30,0:30:51.17:0,51,1192	1/1:15,0:15:9.03:282,9,0	0/0:23,0:23:42.14:0,42,1081	0/0:26,0:26:63.20:0,63,1441	0/0:16,0:16:36.12:0,36,921	1/1:15,9:24:39.13:1286,39,0	1/1:8,4:13:15.52:574,16,0	1/1:10,8:18:21.07:806,21,0	1/1:12,2:16:21.07:602,21,0	0/0:17,0:17:33.11:0,33,845	1/1:15,12:27:18.06:749,18,0	1/1:8,6:16:9.03:307,9,0	1/1:15,6:23:36.12:1306,36,0	1/1:10,12:23:15.05:535,15,0	1/1:23,8:32:3.01:124,3,0	1/1:9,4:13:9.03:238,9,0	1/1:6,5:12:12.04:430,12,0	1/1:7,9:18:6.02:250,6,0	0/0:17,0:17:36.11:0,36,845	1/1:9,10:20:39.13:1468,39,0	1/1:10,13:23:29.85:1240,30,0	1/1:4,0:4:11.99:280,12,0
chr10	109265266	.	GTATATA	G	12808.81	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-0.890;DP=561;FS=3.737;HRun=0;HaplotypeScore=143.9913;InbreedingCoeff=0.9355;MQ=63.76;MQ0=1;MQRankSum=-10.862;QD=31.01;ReadPosRankSum=0.627;VQSLOD=4.6986;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,33:56:69.24:1480,69,0	0/0:4,0:8:21.07:0,21,428	0/0:11,0:10:7.36:0,7,94	0/0:10,0:7:3.01:0,3,82	0/0:6,0:10:8.06:0,8,165	0/0:5,0:24:36.12:0,36,953	0/0:5,0:13:24.08:0,24,680	1/1:10,16:26:45.06:737,45,0	0/0:6,0:13:12.04:0,12,318	0/0:15,0:16:33.11:0,33,979	0/0:13,0:15:36.12:0,36,1083	1/1:6,16:22:45.15:981,45,0	1/1:3,10:14:24.08:500,24,0	1/1:8,23:31:42.14:916,42,0	1/1:8,21:29:45.15:953,45,0	0/0:13,0:14:33.11:0,33,1054	1/1:10,9:19:24.08:523,24,0	1/1:4,20:24:33.11:719,33,0	1/1:7,11:18:33.10:648,33,0	1/1:4,11:16:24.08:500,24,0	1/1:14,18:32:20.67:430,21,0	1/1:4,9:13:21.07:458,21,0	1/1:5,9:14:11.67:261,12,0	1/1:7,17:24:23.65:523,24,0	0/0:3,0:13:26.12:0,26,660	1/1:10,25:35:75.06:1523,75,0	1/1:3,28:31:66.18:1394,66,0	1/1:5,4:9:12.04:262,12,0
chr10	109268356	.	CT	C	17322.69	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=13.233;DP=764;FS=3.818;HRun=3;HaplotypeScore=72.9708;InbreedingCoeff=0.9751;MQ=79.66;MQ0=0;MQRankSum=-4.569;QD=34.78;ReadPosRankSum=3.132;VQSLOD=5.6510;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:40:99:1413,114,0	0/0:11,0:11:33.11:0,33,472	0/0:29,0:29:79.75:0,80,1075	0/0:17,0:17:42.07:0,42,568	0/0:33,0:33:99:0,99,1426	0/0:12,0:12:36.10:0,36,499	0/0:27,0:27:81.27:0,81,1159	1/1:0,33:33:96.26:1152,96,0	0/0:29,0:29:84.24:0,84,1187	0/0:39,0:39:99:0,111,1546	0/0:19,0:19:57.19:0,57,817	1/1:0,22:22:66.21:818,66,0	1/1:0,38:38:99:1301,105,0	1/1:0,29:29:78.25:967,78,0	1/1:0,34:34:99:1227,99,0	0/0:23,0:23:69.22:0,69,977	1/1:0,36:36:99:1265,102,0	1/1:0,38:38:99:1227,99,0	1/1:0,26:26:78.25:967,78,0	1/1:1,32:33:96.30:1190,96,0	1/1:2,24:26:69.22:855,69,0	1/1:1,30:31:84.26:1041,84,0	1/1:1,22:23:66.21:815,66,0	1/1:1,34:35:99:1227,99,0	0/0:27,0:27:81.27:0,81,1165	1/1:2,29:31:90.11:1076,90,0	1/1:0,20:20:60.19:744,60,0	1/1:2,1:3:3.01:37,3,0
chr10	109269086	.	TTTTAA	T	3532.38	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.349;DP=548;FS=9.345;HRun=0;HaplotypeScore=135.4067;InbreedingCoeff=0.9570;MQ=72.99;MQ0=3;MQRankSum=-5.518;QD=41.56;ReadPosRankSum=-1.070;VQSLOD=3.1245;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:27.09:0,27,790	0/0:5,0:5:15.05:0,15,439	0/0:25,0:19:45.15:0,45,1273	0/0:29,0:21:60.21:0,60,1660	1/1:4,9:13:15.05:312,15,0	1/1:3,12:14:33.10:648,33,0	1/1:3,15:18:33.11:685,33,0	0/0:30,0:30:84.28:0,84,2341	1/1:2,19:21:57.16:1184,57,0	0/0:26,0:26:69.23:0,69,2031	0/0:18,0:18:51.18:0,51,1504	0/0:22,0:22:63.21:0,63,1810	0/0:15,0:15:45.15:0,45,1320	0/0:23,0:23:66.23:0,66,1901	0/0:27,0:27:78.27:0,78,2172	0/0:24,1:24:3.82:0,4,1733	0/0:30,0:30:87.27:0,87,2414	0/0:10,0:10:24.08:0,24,654	0/0:15,0:15:45.15:0,45,1346	0/0:13,0:13:36.11:0,36,939	0/0:17,0:17:39.61:0,40,1071	0/0:19,0:19:54.19:0,54,1546	0/0:18,0:18:54.17:0,54,1441	0/0:14,0:14:33.11:0,33,881	1/1:2,16:18:36.08:704,36,0	0/0:23,0:23:66.23:0,66,1957	0/0:20,0:20:57.19:0,57,1666	0/0:15,0:15:39.13:0,39,1183
chr10	109269101	.	G	GGT	2603.86	PASS	AB=0.876;AC=41;AF=0.788;AN=52;BaseQRankSum=5.540;DP=660;FS=3.454;HRun=0;HaplotypeScore=212.8585;InbreedingCoeff=0.2394;MQ=57.62;MQ0=11;MQRankSum=-4.793;QD=4.73;ReadPosRankSum=0.387;VQSLOD=3.0347;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:29:7.37:57,7,0	0/0:7,0:6:5.90:0,6,58	./.	./.	0/1:13,4:17:36.07:146,0,36	1/1:17,4:20:20.96:284,21,0	0/1:16,5:21:35.11:175,0,35	1/1:27,0:27:11.87:83,12,0	0/1:20,9:29:19.36:339,0,19	0/0:22,0:22:19.96:0,20,203	0/1:15,0:16:21.01:21,0,172	1/1:33,0:33:22.79:193,23,0	1/1:22,0:21:20.19:149,20,0	1/1:29,0:28:5.50:40,5,0	1/1:39,0:39:19.07:133,19,0	0/0:24,0:26:45.04:0,45,412	1/1:28,0:26:19.88:143,20,0	1/1:9,0:9:3.89:28,4,0	1/1:16,0:16:10.97:72,11,0	1/1:20,0:19:1.31:20,1,0	1/1:24,0:22:2.56:24,3,0	1/1:28,0:27:4.48:37,4,0	1/1:21,0:19:5.03:39,5,0	1/1:25,0:24:5.63:39,6,0	1/1:18,3:23:23.84:285,24,0	0/1:32,0:31:8.46:150,0,8	1/1:19,0:19:18.82:124,19,0	1/1:22,0:22:24.79:180,25,0
chr10	109269114	.	G	GTA	2971.32	PASS	AB=0.983;AC=24;AF=0.429;AN=56;BaseQRankSum=-0.449;DP=676;FS=18.114;HRun=0;HaplotypeScore=167.4125;InbreedingCoeff=-0.4712;MQ=47.47;MQ0=20;MQRankSum=-2.219;QD=5.57;ReadPosRankSum=4.368;VQSLOD=1.6345;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,16:31:57.03:57,0,89	0/0:9,0:8:17.91:0,18,180	0/0:33,0:15:32.90:0,33,289	0/0:30,0:12:3.23:0,3,231	0/1:17,0:17:34.28:34,0,194	0/1:18,0:18:94.04:94,0,130	0/1:21,0:21:64.48:64,0,137	0/1:23,0:23:68.43:295,0,68	0/1:36,0:36:99:114,0,314	0/0:21,0:19:50.94:0,51,549	0/0:20,0:20:31.09:0,31,484	0/1:31,0:31:11.87:179,0,12	0/1:24,0:23:70.59:167,0,71	0/1:30,0:28:18.72:175,0,19	1/1:36,0:36:14.43:317,14,0	0/0:30,0:29:81.02:0,81,914	1/1:22,0:20:13.13:232,13,0	0/1:12,0:12:82.19:82,0,84	0/1:15,0:14:63.71:117,0,64	0/1:24,0:23:69.32:69,0,115	0/1:29,0:27:58.09:130,0,58	0/1:28,0:27:97.68:98,0,99	0/1:24,0:22:22.56:106,0,23	0/1:26,0:25:10.66:69,0,11	0/1:20,0:20:79.66:80,0,85	0/1:29,0:28:99:260,0,116	0/1:16,0:16:27.14:203,0,27	0/1:20,0:20:50.67:196,0,51
chr10	109269837	.	C	CT	3103.46	PASS	AB=0.748;AC=44;AF=0.786;AN=56;BaseQRankSum=4.569;DP=650;FS=0.000;HRun=14;HaplotypeScore=91.4905;InbreedingCoeff=0.7553;MQ=67.57;MQ0=17;MQRankSum=-1.700;QD=6.33;ReadPosRankSum=2.119;VQSLOD=2.8456;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:51,0:50:74.81:307,75,0	0/0:8,0:8:14.28:0,14,95	0/0:52,0:17:4.07:0,4,58	0/0:47,0:17:17.06:0,17,102	1/1:6,17:24:4.61:156,5,0	1/1:9,14:26:25.80:227,26,0	1/1:7,14:22:17.35:130,17,0	1/1:26,0:26:29.23:120,29,0	1/1:8,3:10:14.86:111,15,0	0/0:26,0:26:27.47:0,27,162	0/0:22,0:25:38.41:0,38,228	1/1:15,0:15:23.94:97,24,0	1/1:12,0:12:24.16:101,24,0	1/1:24,0:24:37.48:155,37,0	1/1:17,0:17:40.09:165,40,0	0/1:13,5:18:2.72:3,0,112	1/1:26,0:25:50.89:209,51,0	1/1:27,0:26:51.05:212,51,0	1/1:22,0:21:34.05:140,34,0	1/1:17,0:18:24.22:118,24,0	1/1:25,0:25:42.90:177,43,0	1/1:7,0:7:13.76:57,14,0	1/1:13,0:13:24.02:98,24,0	1/1:23,0:23:50.56:209,51,0	0/1:12,7:20:24.88:54,0,25	1/1:27,0:29:49.20:209,49,0	1/1:16,0:15:29.70:125,30,0	1/1:18,0:17:24.30:103,24,0
chr10	109269840	.	T	TTTC	5996.99	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=0.017;DP=659;FS=11.986;HRun=0;HaplotypeScore=102.3624;InbreedingCoeff=0.8827;MQ=67.06;MQ0=21;MQRankSum=0.772;QD=15.30;ReadPosRankSum=7.022;VQSLOD=2.8243;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:48,1:48:78.30:661,78,0	0/0:8,0:8:15.52:0,16,245	0/0:56,0:16:29.57:0,30,271	0/0:49,0:16:29.88:0,30,271	0/0:25,0:24:41.76:0,42,320	0/0:28,0:28:46.44:0,46,342	0/0:21,0:21:26.22:0,26,178	0/1:24,0:24:10.79:341,0,11	0/0:11,0:10:21.99:0,22,152	0/0:26,0:26:69.09:0,69,805	0/0:25,0:25:72.01:0,72,894	1/1:17,0:16:26.50:188,27,0	1/1:11,1:12:26.72:231,27,0	1/1:22,1:23:41.67:348,42,0	1/1:19,0:19:44.82:346,45,0	0/0:18,0:18:41.92:0,42,525	1/1:24,0:24:56.76:437,57,0	1/1:27,0:26:55.82:421,56,0	1/1:21,0:21:54.42:460,54,0	1/1:19,0:19:36.81:307,37,0	1/1:24,1:25:50.79:426,51,0	1/1:7,0:7:17.64:146,18,0	1/1:14,0:14:26.86:207,27,0	1/1:23,0:23:56.78:436,57,0	0/1:19,0:19:1.53:2,0,226	1/1:31,0:31:53.59:551,54,0	1/1:19,0:18:32.84:248,33,0	1/1:16,1:16:26.89:241,27,0
chr10	109269841	.	T	TTC	11409.50	PASS	AB=0.575;AC=33;AF=0.589;AN=56;BaseQRankSum=-12.899;DP=668;FS=8.992;HRun=0;HaplotypeScore=72.9781;InbreedingCoeff=0.9004;MQ=66.19;MQ0=22;MQRankSum=0.034;QD=29.87;ReadPosRankSum=6.877;VQSLOD=6.0270;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,47:51:87.17:1321,87,0	0/0:7,0:7:18.42:0,18,240	0/0:55,0:15:9.99:0,10,267	0/0:49,0:16:13.38:0,13,210	0/0:25,0:24:42.37:0,42,304	0/0:27,0:27:21.14:0,21,293	0/0:21,0:21:5.20:0,5,156	0/1:6,17:23:10.46:566,0,10	0/0:12,0:11:22.08:0,22,142	0/0:26,0:26:75.07:0,75,814	0/0:25,0:25:72.04:0,72,832	1/1:1,15:15:27.09:425,27,0	1/1:1,12:13:26.92:403,27,0	1/1:1,23:24:42.13:644,42,0	1/1:1,19:20:45.12:713,45,0	0/0:18,0:18:41.87:0,42,478	1/1:2,24:26:60.14:924,60,0	1/1:2,24:25:56.93:870,57,0	1/1:3,18:21:59.83:741,60,0	1/1:2,17:19:43.11:520,43,0	1/1:2,21:24:38.98:731,39,0	1/1:0,7:7:18.02:250,18,0	1/1:3,12:15:27.05:427,27,0	1/1:1,22:24:56.83:902,57,0	0/0:19,0:19:23.80:0,24,253	1/1:3,28:31:55.09:1048,55,0	1/1:0,20:19:33.58:519,34,0	1/1:4,15:17:27.01:406,27,0
chr10	109269842	.	T	TC	3665.35	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=5.300;DP=666;FS=7.330;HRun=0;HaplotypeScore=91.2616;InbreedingCoeff=0.8139;MQ=65.32;MQ0=23;MQRankSum=0.054;QD=9.67;ReadPosRankSum=9.365;VQSLOD=2.4087;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:53,1:53:68.79:387,69,0	0/0:7,0:7:18.86:0,19,227	0/0:56,0:14:13.38:0,13,260	0/0:50,0:16:31.71:0,32,253	0/0:25,0:24:38.11:0,38,279	0/0:27,0:27:31.18:0,31,249	0/0:21,0:21:24.41:0,24,164	0/1:21,0:21:12.06:247,0,12	0/0:12,0:11:16.54:0,17,100	0/0:25,0:25:75.08:0,75,796	0/0:26,0:26:71.99:0,72,777	1/1:16,0:15:25.81:129,26,0	1/1:13,0:13:25.37:125,25,0	1/1:24,0:24:39.98:200,40,0	1/1:20,0:20:24.31:195,24,0	0/0:18,0:18:39.47:0,39,440	1/1:26,0:25:45.37:262,45,0	1/1:24,1:24:54.56:299,55,0	1/1:20,1:20:42.81:330,43,0	1/1:19,0:20:16.66:179,17,0	1/1:24,0:24:26.34:209,26,0	0/1:7,0:7:0.41:79,0,0	1/1:14,0:14:25.68:130,26,0	1/1:24,0:24:36.32:252,36,0	0/0:19,0:19:29.19:0,29,282	1/1:31,1:32:37.69:392,38,0	1/1:19,0:18:30.96:153,31,0	0/1:19,0:17:16.06:95,0,16
chr10	109271359	.	C	CGTGCGTGTGTGTGT	7048.84	PASS	AB=0.994;AC=26;AF=0.464;AN=56;BaseQRankSum=6.159;DP=691;FS=0.371;HRun=0;HaplotypeScore=311.4452;InbreedingCoeff=-0.1704;MQ=54.92;MQ0=4;MQRankSum=-2.067;QD=12.75;ReadPosRankSum=-1.569;VQSLOD=2.3708;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:39:99:197,0,114	0/0:6,0:10:14.77:0,15,370	0/0:24,0:15:42.02:0,42,394	0/0:36,0:18:37.83:0,38,368	1/1:20,0:21:23.39:233,23,0	1/1:16,0:16:23.19:432,23,0	1/1:47,0:47:66.67:1118,67,0	0/1:29,0:29:99:590,0,193	1/1:4,13:30:6.02:418,6,0	0/0:28,0:30:49.02:0,49,1069	0/1:8,0:9:28.70:29,0,149	0/1:27,0:27:99:189,0,197	0/1:31,0:31:99:884,0,127	0/1:31,0:31:76.81:322,0,77	0/1:22,0:22:99:174,0,117	0/0:24,0:25:51.87:0,52,1616	0/1:24,0:24:97.72:518,0,98	0/1:17,0:16:99:156,0,145	0/1:32,0:30:99:331,0,282	0/1:22,0:22:23.66:24,0,137	0/1:45,0:43:99:205,0,229	0/1:15,0:15:12.14:12,0,63	0/0:10,0:10:8.99:0,9,75	0/1:29,0:28:2.98:3,0,128	1/1:21,0:21:26.55:259,27,0	0/1:28,0:28:99:534,0,290	0/1:17,0:17:99:422,0,164	0/0:3,0:2:2.97:0,3,20
chr10	109275018	.	A	AGTGTGT	2457.76	PASS	AB=0.995;AC=34;AF=0.680;AN=50;BaseQRankSum=-2.612;DP=693;FS=8.759;HRun=0;HaplotypeScore=213.8689;InbreedingCoeff=0.2023;MQ=61.39;MQ0=4;MQRankSum=-0.192;QD=4.86;ReadPosRankSum=-0.622;VQSLOD=0.9630;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:15.01:170,15,0	0/1:15,0:15:3.08:3,0,138	./.	./.	1/1:25,0:25:17.64:174,18,0	0/1:13,0:11:31.10:31,0,54	1/1:28,0:28:5.71:62,6,0	1/1:19,0:19:5.93:40,6,0	0/1:28,0:27:14.25:14,0,26	0/1:34,0:34:5.55:6,0,249	1/1:16,0:15:5.25:57,5,0	0/0:23,0:23:6.55:0,7,61	./.	0/0:16,0:16:3.38:0,3,8	0/0:21,0:21:1.77:0,2,4	0/1:30,0:31:18.95:19,0,548	1/1:23,0:23:5.03:151,5,0	0/1:14,0:14:18.77:19,0,27	1/1:25,0:23:9.96:146,10,0	1/1:27,0:27:13.92:203,14,0	1/1:61,0:61:14.82:296,15,0	0/0:26,0:26:1.24:0,1,3	0/0:24,0:24:0.47:0,0,1	1/1:22,0:22:2.32:8,2,0	1/1:27,0:28:14.82:155,15,0	1/1:24,0:24:35.95:453,36,0	1/1:19,0:20:35.87:471,36,0	1/1:14,2:20:6:120,6,0
chr10	109275056	.	TGTGTATGA	T	2783.86	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=4.569;DP=641;FS=14.557;HRun=0;HaplotypeScore=239.5069;InbreedingCoeff=0.0870;MQ=43.64;MQ0=19;MQRankSum=0.294;QD=6.12;ReadPosRankSum=-3.760;VQSLOD=0.6198;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:39:50.96:51,0,469	0/0:13,0:13:8.93:0,9,400	0/1:17,0:8:20.40:20,0,181	0/1:20,0:9:12.61:13,0,233	1/1:24,2:25:31.96:470,32,0	1/1:22,0:19:22.41:321,22,0	1/1:24,2:24:25.30:362,25,0	0/1:27,0:25:0.94:1,0,830	1/1:19,2:19:24.06:423,24,0	0/0:39,0:37:74.39:0,74,1882	0/0:14,0:13:14.10:0,14,909	0/1:18,0:18:50.60:57,0,51	1/1:10,0:10:2.76:19,3,0	0/1:17,0:17:8.26:47,0,8	1/1:21,0:21:0.94:164,1,0	0/0:30,0:30:17.07:0,17,1573	0/1:23,0:23:48.59:49,0,534	0/1:12,0:12:33.40:33,0,329	0/1:14,0:9:9.41:9,0,285	0/1:26,0:25:29.90:30,0,556	0/0:72,0:72:68.05:0,68,1740	1/1:18,0:17:15.99:206,16,0	1/1:18,0:18:11.29:56,11,0	1/1:15,0:15:0.05:1,0,0	1/1:18,3:21:30.02:482,30,0	0/1:25,0:23:95.21:95,0,1043	0/1:18,0:18:54.92:55,0,348	0/0:18,0:18:12.92:0,13,404
chr10	109275059	.	GTA	G	1553.60	PASS	AB=0.969;AC=29;AF=0.518;AN=56;BaseQRankSum=10.552;DP=637;FS=1.338;HRun=0;HaplotypeScore=199.2605;InbreedingCoeff=-0.2143;MQ=45.19;MQ0=18;MQRankSum=-4.459;QD=3.24;ReadPosRankSum=-2.632;VQSLOD=2.4739;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:39:31.23:31,0,227	0/1:11,1:12:26.17:26,0,181	0/1:17,0:8:12.66:13,0,59	0/1:22,0:10:10.75:11,0,95	1/1:25,0:24:15.15:138,15,0	0/1:21,1:19:37.49:118,0,37	1/1:27,0:25:28.20:219,28,0	0/1:28,0:26:19.89:20,0,404	1/1:22,0:20:19.58:139,20,0	0/0:39,0:37:69.92:0,70,865	0/0:14,0:13:0.97:0,1,303	1/1:16,0:16:9.03:91,9,0	0/1:8,0:8:0:0,0,0	0/1:16,0:16:9.99:51,0,10	0/1:20,0:20:14.40:65,0,14	0/1:29,2:31:32.96:33,0,555	0/1:23,1:24:79.06:79,0,205	0/1:11,2:13:98.93:99,0,134	0/1:16,0:10:26.39:26,0,219	0/1:23,2:25:45.98:46,0,181	0/0:72,0:72:55.43:0,55,747	1/1:15,0:15:20.07:118,20,0	1/1:12,0:12:1.20:2,1,0	0/0:14,0:14:1.49:0,1,4	0/1:23,0:23:2.10:140,0,2	0/1:25,0:23:94.81:95,0,309	0/1:18,2:20:78.46:154,0,78	0/0:18,0:18:25.23:0,25,172
chr10	109275060	.	TATGA	T	3589.37	PASS	AB=0.974;AC=34;AF=0.607;AN=56;BaseQRankSum=5.188;DP=628;FS=23.344;HRun=0;HaplotypeScore=204.8991;InbreedingCoeff=-0.3700;MQ=45.29;MQ0=18;MQRankSum=-3.119;QD=6.25;ReadPosRankSum=-2.986;VQSLOD=1.1107;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:38:99:115,0,535	0/1:12,0:12:81.88:82,0,314	0/1:18,1:10:17.39:17,0,239	0/1:23,0:10:12.65:13,0,233	1/1:21,2:22:32.45:379,32,0	0/1:19,2:19:11.88:276,0,12	1/1:27,0:25:29.26:433,29,0	0/1:24,5:27:85.59:86,0,924	1/1:21,1:20:24.06:330,24,0	0/0:37,0:35:48.08:0,48,1588	0/1:14,0:13:14.76:15,0,675	0/1:16,0:16:29.57:58,0,30	1/1:8,0:8:2.89:19,3,0	0/1:16,0:16:28.68:30,0,29	0/1:20,0:20:17.68:112,0,18	0/1:29,1:30:72.47:72,0,1004	0/1:24,0:24:99:148,0,430	0/1:13,0:13:99:109,0,260	0/1:18,0:11:48.60:49,0,348	0/1:25,1:26:89.69:90,0,430	0/1:65,1:66:8.06:8,0,1480	1/1:16,0:15:16.25:206,16,0	1/1:12,0:12:11.77:57,12,0	1/1:14,0:14:2.20:15,2,0	1/1:20,2:22:28.15:418,28,0	0/1:25,0:23:99:240,0,687	0/1:17,2:19:99:212,0,204	0/0:17,0:17:11.01:0,11,358
chr10	109275062	.	TGA	T	1434.90	PASS	AB=0.989;AC=26;AF=0.464;AN=56;BaseQRankSum=10.227;DP=647;FS=20.510;HRun=0;HaplotypeScore=210.8947;InbreedingCoeff=-0.1016;MQ=45.12;MQ0=17;MQRankSum=-4.025;QD=3.25;ReadPosRankSum=-2.701;VQSLOD=1.0010;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:38:25.71:26,0,661	0/1:12,0:12:5.33:5,0,378	0/0:20,0:11:6.65:0,7,390	0/0:25,0:11:24.58:0,25,400	1/1:21,0:20:9.85:127,10,0	0/1:21,1:20:2.64:137,0,3	1/1:25,1:24:27.50:213,28,0	0/1:30,0:28:18.24:18,0,1087	1/1:21,0:19:20.69:144,21,0	0/0:37,0:35:78.23:0,78,1715	0/0:14,0:13:7.15:0,7,607	0/1:18,0:18:55.30:55,0,93	0/0:12,0:12:2.29:0,2,19	0/1:17,0:17:10.09:10,0,53	0/1:23,0:23:38.89:39,0,43	0/1:29,0:29:10.90:11,0,966	0/1:23,1:24:99:105,0,529	0/1:12,1:13:99:135,0,271	0/1:20,0:12:17.64:18,0,415	0/1:26,0:26:45.13:45,0,485	0/0:64,2:66:32.16:0,32,1850	1/1:20,0:19:5.93:111,6,0	0/0:14,0:14:0.33:0,0,2	1/1:13,1:14:2.57:31,3,0	1/1:22,0:22:1.70:144,2,0	0/1:25,0:24:65.54:66,0,678	0/1:20,0:20:99:162,0,198	0/0:17,0:17:24.83:0,25,439
chr10	109275102	.	TATGA	T	1313.28	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=16.712;DP=793;FS=13.045;HRun=0;HaplotypeScore=345.0618;InbreedingCoeff=0.5341;MQ=48.97;MQ0=3;MQRankSum=-16.184;QD=4.78;ReadPosRankSum=-2.405;VQSLOD=0.7928;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:68.82:0,69,1946	0/1:10,0:10:16.63:17,0,606	0/0:27,0:20:49.34:0,49,1090	0/0:35,1:24:62.95:0,63,1167	0/0:23,1:22:34.75:0,35,883	0/0:22,2:23:37.30:0,37,1239	0/0:31,1:32:61.10:0,61,1462	0/0:32,0:32:96.27:0,96,2345	0/0:32,0:31:19.91:0,20,852	0/0:37,0:37:99:0,111,2923	0/0:18,0:18:51.18:0,51,1363	0/1:36,0:36:24.21:241,0,24	1/1:38,0:38:17.69:296,18,0	0/1:38,0:38:88.48:204,0,88	1/1:47,0:47:26.76:386,27,0	0/0:35,0:35:53.16:0,53,2304	0/0:26,0:26:42.55:0,43,1829	0/0:13,1:14:19.28:0,19,962	0/0:13,0:13:36.11:0,36,839	0/0:23,0:23:63.22:0,63,1748	0/0:76,0:76:99:0,190,4775	1/1:28,0:27:47.21:194,47,0	1/1:20,0:20:31.51:132,32,0	1/1:15,0:16:2.66:9,3,0	0/1:23,0:23:8.86:9,0,882	0/0:20,0:20:60.20:0,60,1566	0/0:17,0:17:47.91:0,48,1254	0/1:19,0:19:3.34:3,0,941
chr10	109275106	.	AGTGT	A	6326.43	PASS	AB=0.653;AC=11;AF=0.196;AN=56;BaseQRankSum=15.318;DP=817;FS=5.192;HRun=0;HaplotypeScore=338.5605;InbreedingCoeff=0.6685;MQ=48.87;MQ0=4;MQRankSum=-15.794;QD=27.87;ReadPosRankSum=-1.859;VQSLOD=3.7551;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:78.26:0,78,1919	0/0:11,0:11:30.03:0,30,636	0/0:30,0:18:39.13:0,39,957	0/0:38,0:27:62.60:0,63,1158	0/0:22,0:21:28.54:0,29,702	0/0:24,0:23:20.51:0,21,1032	0/0:33,0:33:56.25:0,56,1178	0/0:32,0:32:59.07:0,59,1759	0/0:31,0:32:14.35:0,14,768	0/0:38,0:38:99:0,102,2481	0/0:19,0:19:51.15:0,51,1141	0/1:17,18:37:42.40:979,0,42	0/1:17,19:38:2.37:1249,0,2	0/1:20,17:40:16.01:974,0,16	1/1:21,27:48:71.26:1554,71,0	0/0:35,0:35:96.33:0,96,2375	0/0:29,0:29:72.72:0,73,1745	0/0:14,0:14:36.11:0,36,834	0/0:13,0:13:27.08:0,27,568	0/0:22,0:22:63.20:0,63,1508	0/0:77,0:78:99:0,144,4176	1/1:20,4:27:61.61:902,62,0	1/1:16,4:20:41.99:589,42,0	1/1:13,3:16:7.05:78,7,0	0/0:23,0:26:5.94:0,6,693	0/0:23,0:23:63.16:0,63,1418	0/0:19,0:19:54.18:0,54,1271	0/0:18,0:18:36.10:0,36,869
chr10	109275116	.	TGTGA	T	6426.22	PASS	AB=0.924;AC=15;AF=0.268;AN=56;BaseQRankSum=15.921;DP=927;FS=5.988;HRun=0;HaplotypeScore=415.8855;InbreedingCoeff=0.5287;MQ=48.06;MQ0=5;MQRankSum=-16.776;QD=17.85;ReadPosRankSum=-3.933;VQSLOD=2.9349;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.24:0,93,2213	0/0:11,0:11:30.04:0,30,624	0/0:40,0:28:70.69:0,71,1312	0/0:39,0:28:46.26:0,46,1140	0/1:35,0:35:5.25:5,0,726	0/1:28,0:27:10.02:10,0,1073	0/0:45,0:45:62.65:0,63,1271	0/0:33,0:32:89.59:0,90,1866	0/0:46,0:43:6.68:0,7,822	0/0:39,0:39:99:0,117,2803	0/0:18,0:18:51.13:0,51,1210	0/1:35,9:44:44.42:913,0,44	0/1:36,13:49:14.02:1238,0,14	1/1:36,11:47:10.43:939,10,0	1/1:43,12:55:63.60:1338,64,0	0/0:38,0:38:99:0,108,2647	0/0:31,0:31:84.59:0,85,1947	0/0:14,0:14:39.07:0,39,928	0/0:15,0:14:33.07:0,33,633	0/0:23,0:23:66.18:0,66,1628	0/0:79,0:80:99:0,150,4662	1/1:13,20:32:66.22:1170,66,0	1/1:8,15:23:44.79:692,45,0	1/1:8,8:17:5.34:109,5,0	0/1:29,0:29:12.01:12,0,685	0/0:24,0:24:69.24:0,69,1725	0/0:20,0:20:59.76:0,60,1422	0/0:17,0:17:36.11:0,36,943
chr10	109275127	.	GTATGAA	G	1275.58	PASS	AB=0.895;AC=10;AF=0.179;AN=56;BaseQRankSum=10.537;DP=949;FS=6.491;HRun=0;HaplotypeScore=480.4389;InbreedingCoeff=-0.2249;MQ=49.06;MQ0=7;MQRankSum=-8.132;QD=3.13;ReadPosRankSum=-8.214;VQSLOD=-0.7144;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.24:0,90,2937	0/0:7,0:7:18.06:0,18,659	0/0:46,0:31:52.15:0,52,2547	0/0:45,0:30:46.25:0,46,1570	0/1:25,9:36:43.74:44,0,747	0/1:25,2:26:26.53:27,0,1177	0/1:29,11:40:99:135,0,1188	0/0:30,0:29:76.01:0,76,2865	0/1:38,11:46:99:329,0,844	0/0:43,0:43:99:0,126,4274	0/0:17,0:17:51.16:0,51,1757	0/1:43,0:46:99:149,0,836	0/1:52,0:52:99:229,0,1648	0/1:50,0:50:99:143,0,794	0/1:56,0:58:99:109,0,1011	0/0:41,0:41:99:0,123,4370	0/0:30,0:30:81.28:0,81,2922	0/0:14,0:14:42.06:0,42,1444	0/0:17,0:16:39.12:0,39,1304	0/0:25,0:25:75.26:0,75,2546	0/0:79,0:80:99:0,207,6683	0/0:35,0:33:37.77:0,38,659	0/1:22,0:22:27.96:28,0,339	0/0:17,0:17:4.24:0,4,32	0/1:18,9:27:99:228,0,724	0/0:25,0:25:72.25:0,72,2612	0/0:21,0:21:51.14:0,51,1866	0/0:18,0:18:42.14:0,42,1513
chr10	109275133	.	A	ATG	904.58	PASS	AB=0.824;AC=8;AF=0.143;AN=56;BaseQRankSum=9.084;DP=964;FS=23.907;HRun=0;HaplotypeScore=447.1899;InbreedingCoeff=-0.1179;MQ=48.35;MQ0=8;MQRankSum=-8.894;QD=2.66;ReadPosRankSum=-1.638;VQSLOD=0.0236;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.12:0,84,1027	0/0:7,0:7:18.06:0,18,240	0/0:46,0:31:58.28:0,58,801	0/0:49,0:29:53.42:0,53,542	0/0:36,0:36:17.24:0,17,270	0/0:26,0:25:40.16:0,40,463	0/0:39,0:39:35.50:0,35,452	0/0:34,0:33:56.72:0,57,967	0/1:46,0:43:46.05:46,0,223	0/0:44,0:44:99:0,111,1466	0/0:17,0:17:45.15:0,45,599	0/1:35,12:47:99:273,0,343	0/1:38,15:53:99:265,0,823	0/1:38,11:49:99:122,0,332	0/1:48,10:58:99:107,0,472	0/0:46,0:46:99:0,129,1690	0/0:30,0:30:81.20:0,81,998	0/0:13,0:14:39.13:0,39,515	0/0:15,0:13:36.11:0,36,464	0/0:28,0:28:72.23:0,72,943	0/0:80,1:81:99:0,176,2239	0/1:19,18:35:94.23:130,0,94	0/1:12,11:23:32.98:63,0,33	0/0:11,6:17:0.72:0,1,2	0/1:27,0:27:32.87:33,0,263	0/0:27,0:27:81.16:0,81,1016	0/0:20,0:20:30.16:0,30,581	0/0:17,0:17:42.14:0,42,546
chr10	109275144	.	A	AGT	9864.40	PASS	AB=0.957;AC=30;AF=0.536;AN=56;BaseQRankSum=-9.634;DP=1009;FS=0.345;HRun=0;HaplotypeScore=426.0581;InbreedingCoeff=0.2933;MQ=46.89;MQ0=13;MQRankSum=5.634;QD=13.66;ReadPosRankSum=0.788;VQSLOD=4.0367;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,22:33:10.39:1137,10,0	0/0:8,0:8:21.05:0,21,246	0/0:48,0:27:23.45:0,23,306	0/0:53,0:28:18.19:0,18,210	0/1:37,0:37:13.41:44,0,13	0/1:29,0:29:19.06:19,0,46	0/1:42,0:42:44.32:62,0,44	1/1:11,24:35:72.25:1164,72,0	0/1:49,0:47:2.75:110,0,3	0/0:45,0:45:80.90:0,81,1143	0/0:17,0:17:45.14:0,45,554	0/0:33,0:46:20.14:0,20,120	0/1:45,0:54:57.99:58,0,170	0/1:41,0:47:28.30:28,0,85	0/1:50,0:57:30.66:42,0,31	0/0:52,0:52:99:0,135,1649	1/1:10,23:33:84.69:1257,85,0	1/1:12,6:18:19.51:448,20,0	1/1:9,7:13:18.02:248,18,0	0/1:7,20:27:13.64:817,0,14	1/1:45,40:87:99:2311,150,0	0/1:29,0:34:5.68:6,0,11	0/0:13,0:18:7.19:0,7,32	1/1:12,0:13:0.04:1,0,0	0/1:31,0:31:9.97:53,0,10	1/1:5,23:28:20.04:1018,20,0	1/1:5,20:28:36.12:585,36,0	1/1:8,12:20:30.10:457,30,0
chr10	109275158	.	TGA	T	570.90	PASS	AB=0.998;AC=18;AF=0.321;AN=56;BaseQRankSum=14.145;DP=1016;FS=3.354;HRun=0;HaplotypeScore=425.5278;InbreedingCoeff=0.2280;MQ=47.47;MQ0=14;MQRankSum=-12.319;QD=1.12;ReadPosRankSum=-1.516;VQSLOD=0.7367;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,1:40:88.56:0,89,1054	0/0:10,0:10:27.04:0,27,419	0/0:51,1:28:23.14:0,23,712	0/1:58,1:28:6.85:7,0,488	0/1:39,0:39:20.02:20,0,188	0/1:28,0:28:59.04:80,0,59	0/0:43,0:43:47.02:0,47,401	0/1:50,0:47:11.63:12,0,973	0/1:53,0:51:30.74:31,0,194	0/0:49,0:49:99:0,138,2158	0/0:19,0:19:57.15:0,57,967	1/1:40,0:40:28.57:150,29,0	0/1:46,0:47:61.13:166,0,61	0/1:39,0:39:3.72:81,0,4	1/1:45,0:45:18.88:125,19,0	0/0:52,0:52:99:0,153,2736	0/0:38,0:38:13.49:0,13,757	0/1:18,0:18:12.32:12,0,399	0/0:13,0:9:27.02:0,27,255	0/0:26,0:26:72.07:0,72,772	0/0:80,2:81:63.30:0,63,1454	1/1:29,0:29:6.41:24,6,0	1/1:17,0:17:2.90:21,3,0	0/1:9,0:9:0:1,0,0	0/1:36,0:36:12.41:12,0,188	0/0:32,0:32:35.67:0,36,818	0/0:32,0:32:56.82:0,57,512	0/0:18,0:18:42.05:0,42,468
chr10	109275160	.	A	AGT	603.11	PASS	AB=0.963;AC=12;AF=0.214;AN=56;BaseQRankSum=7.684;DP=1006;FS=8.289;HRun=0;HaplotypeScore=429.2023;InbreedingCoeff=0.0813;MQ=48.88;MQ0=13;MQRankSum=-7.279;QD=1.57;ReadPosRankSum=-2.822;VQSLOD=0.4380;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:15.10:0,15,513	0/0:11,0:11:24.08:0,24,342	0/0:48,0:26:47.66:0,48,782	0/0:62,0:32:54.64:0,55,734	0/0:39,0:39:12.51:0,13,271	0/0:28,0:28:22.59:0,23,168	0/0:40,0:40:40.41:0,40,479	0/0:49,0:46:75.48:0,75,860	0/1:55,0:53:0.74:1,0,377	0/0:49,0:49:99:0,118,1656	0/0:19,0:19:57.18:0,57,796	0/1:38,0:40:44.56:86,0,45	0/1:45,1:46:56.65:57,0,201	0/1:34,1:38:63.62:96,0,64	0/1:41,2:45:0.80:270,0,1	0/0:53,0:53:99:0,150,2093	0/1:36,0:36:66.34:66,0,214	0/0:17,0:17:22.46:0,22,229	0/0:12,0:9:19:0,19,208	0/0:29,0:29:12.66:0,13,277	0/0:75,0:76:25.39:0,25,362	1/1:25,2:28:8.16:109,8,0	0/1:15,1:17:13.90:15,0,14	0/1:6,2:9:0.05:0,0,0	0/1:36,0:36:30.11:30,0,274	0/0:29,0:29:27.47:0,27,367	0/1:33,0:32:17.17:17,0,262	0/0:20,0:20:10.87:0,11,183
chr10	109275164	.	AAT	A	3572.45	PASS	AB=0.785;AC=17;AF=0.304;AN=56;BaseQRankSum=16.808;DP=970;FS=0.000;HRun=0;HaplotypeScore=378.1326;InbreedingCoeff=0.4428;MQ=50.38;MQ0=14;MQRankSum=-14.744;QD=9.48;ReadPosRankSum=-2.080;VQSLOD=2.1686;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,2164	0/0:10,0:10:30.10:0,30,569	0/0:50,0:28:77.22:0,77,1203	0/0:65,0:37:44.33:0,44,1160	0/1:24,11:35:99:207,0,371	0/1:16,13:29:99:475,0,575	0/1:37,3:40:10.28:10,0,990	0/0:46,0:43:99:0,114,2145	0/1:41,11:52:99:233,0,1090	0/0:46,0:45:99:0,132,2621	0/0:22,0:22:66.20:0,66,1264	1/1:11,21:32:50.72:593,51,0	0/1:17,17:35:24.48:733,0,24	1/1:19,15:34:12.63:361,13,0	1/1:16,23:39:41.08:565,41,0	0/0:56,0:56:99:0,166,3233	0/0:38,0:38:57.75:0,58,1702	0/0:17,0:17:25.05:0,25,828	0/0:14,0:12:36.11:0,36,679	0/0:29,0:29:87.25:0,87,1644	0/0:78,2:79:99:0,163,3453	1/1:7,16:24:19.46:184,19,0	1/1:5,9:14:5.96:50,6,0	0/1:7,2:9:0.13:0,0,0	0/1:26,7:34:99:161,0,731	0/0:28,0:28:64.98:0,65,1494	0/0:33,0:32:62.63:0,63,1088	0/0:18,0:18:48.15:0,48,912
chr10	109275175	.	ATG	A	3657.53	PASS	AB=0.823;AC=17;AF=0.304;AN=56;BaseQRankSum=10.068;DP=1056;FS=2.564;HRun=0;HaplotypeScore=394.9581;InbreedingCoeff=0.4169;MQ=48.85;MQ0=14;MQRankSum=-6.765;QD=8.29;ReadPosRankSum=-2.403;VQSLOD=1.8559;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,1687	0/1:10,1:11:6.81:7,0,486	0/0:47,0:25:50.33:0,50,826	0/0:59,1:32:67.35:0,67,1165	1/1:16,21:37:37.71:457,38,0	1/1:15,17:32:36.70:551,37,0	1/1:13,28:41:16.84:649,17,0	0/0:47,0:44:99:0,105,1752	1/1:21,32:53:50.67:825,51,0	0/0:56,0:55:99:0,149,2488	0/0:26,0:26:72.25:0,72,1247	0/1:31,10:41:68.92:69,0,511	0/1:36,9:45:99:208,0,899	0/1:34,6:40:23.36:23,0,701	0/1:40,6:46:62.50:63,0,573	0/0:59,0:59:99:0,162,2702	0/0:36,0:36:61.89:0,62,1472	0/0:23,0:22:63.17:0,63,1041	0/0:14,0:12:33.10:0,33,545	0/0:28,0:28:84.25:0,84,1372	0/0:82,0:80:99:0,192,3224	0/1:19,14:33:99:162,0,244	0/1:16,8:24:44.62:45,0,249	0/0:14,1:15:17.47:0,17,296	1/1:14,24:38:34.79:599,35,0	0/0:33,0:33:79.19:0,79,1349	0/0:32,0:31:51.08:0,51,836	0/0:20,0:20:48.16:0,48,830
chr10	109275183	.	GTA	G	1563.12	PASS	AB=0.984;AC=15;AF=0.268;AN=56;BaseQRankSum=14.630;DP=1086;FS=1.069;HRun=0;HaplotypeScore=385.6633;InbreedingCoeff=0.2135;MQ=49.88;MQ0=16;MQRankSum=-9.430;QD=3.37;ReadPosRankSum=-0.004;VQSLOD=1.3253;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,102,1872	0/0:14,0:14:19.95:0,20,606	0/0:46,0:22:34.83:0,35,963	0/0:59,1:36:92.96:0,93,1408	0/1:34,4:38:47.30:165,0,47	1/1:29,1:30:34.33:297,34,0	0/1:35,0:35:11.56:261,0,12	0/0:52,1:49:99:0,120,2089	1/1:46,2:48:45.65:385,46,0	0/0:55,0:54:99:0,157,2834	0/0:28,0:28:84.23:0,84,1477	0/1:43,0:43:46.49:46,0,556	0/1:48,0:49:99:159,0,891	0/1:40,0:40:26.61:27,0,711	0/1:48,0:48:28.91:29,0,650	0/0:58,0:58:99:0,163,3022	0/1:35,1:36:1.33:1,0,1573	0/0:27,0:26:63.24:0,63,1221	0/0:16,0:14:39.11:0,39,655	0/0:29,0:29:81.26:0,81,1493	0/0:94,0:92:99:0,222,3793	0/1:37,0:37:59.14:59,0,299	0/1:24,0:24:16.29:16,0,264	0/0:18,0:18:23.51:0,24,387	1/1:35,1:36:36.05:291,36,0	0/0:32,0:32:64.93:0,65,1463	0/0:31,0:30:53.95:0,54,937	0/0:19,0:19:51.15:0,51,925
chr10	109275196	.	T	TGAGA	2346.60	PASS	AB=0.851;AC=6;AF=0.107;AN=56;BaseQRankSum=12.479;DP=1135;FS=49.963;HRun=0;HaplotypeScore=404.1333;InbreedingCoeff=-0.1200;MQ=49.88;MQ0=11;MQRankSum=-10.579;QD=8.86;ReadPosRankSum=-3.597;VQSLOD=1.3129;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:93.30:0,93,1657	0/0:15,0:15:45.14:0,45,783	0/0:42,0:17:39.28:0,39,661	0/0:56,0:39:84.44:0,84,1436	0/0:38,0:38:50.54:0,51,918	0/0:30,0:30:49.90:0,50,791	0/0:40,0:40:78.25:0,78,1365	0/0:57,0:54:77.60:0,78,1964	0/0:51,0:51:79.82:0,80,1418	0/0:64,0:63:99:0,169,2975	0/0:27,0:26:75.26:0,75,1351	0/1:37,9:46:99:349,0,696	0/1:49,6:55:99:453,0,1251	0/1:40,4:43:99:331,0,617	0/1:47,3:50:99:317,0,704	0/0:57,0:57:99:0,150,2652	0/0:38,0:38:66.36:0,66,1503	0/0:28,0:27:59.16:0,59,1125	0/0:18,0:16:36.12:0,36,645	0/0:29,0:29:78.27:0,78,1403	0/0:98,0:96:99:0,224,3981	0/1:25,13:38:99:670,0,221	0/1:22,10:32:99:352,0,226	0/0:25,0:25:31.88:0,32,575	0/0:38,0:39:66.05:0,66,1118	0/0:28,0:28:75.25:0,75,1329	0/0:29,0:28:42.06:0,42,701	0/0:21,0:21:57.20:0,57,1025
chr10	109275332	.	AGT	A	1078.84	PASS	AB=0.952;AC=16;AF=0.286;AN=56;BaseQRankSum=9.032;DP=1012;FS=3.222;HRun=0;HaplotypeScore=241.9681;InbreedingCoeff=0.7593;MQ=49.74;MQ0=25;MQRankSum=-1.335;QD=4.82;ReadPosRankSum=-0.470;VQSLOD=2.9383;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,114,1722	0/1:12,1:12:13.38:13,0,270	0/0:37,0:8:12.01:0,12,130	0/0:59,0:28:31.33:0,31,355	0/0:22,0:21:17.78:0,18,266	0/1:40,1:41:19.85:20,0,810	0/0:46,0:46:49.16:0,49,1095	0/0:48,0:45:99:0,99,1280	0/0:46,1:48:53.26:0,53,1077	0/0:52,0:51:99:0,116,1680	0/0:17,0:16:42.11:0,42,608	1/1:5,16:20:2.91:37,3,0	1/1:20,4:24:35.12:314,35,0	1/1:12,7:19:6:75,6,0	1/1:23,7:30:17.99:192,18,0	0/0:53,0:53:99:0,129,1898	0/0:45,0:45:99:0,108,1566	0/0:23,0:22:60.09:0,60,891	0/0:26,0:21:51.05:0,51,696	0/0:26,0:26:51.14:0,51,761	0/0:112,1:111:99:0,174,3754	1/1:23,7:29:20.16:143,20,0	1/1:10,3:13:11.19:99,11,0	1/1:18,15:33:30.02:373,30,0	0/0:43,0:43:89.75:0,90,1335	0/0:40,0:40:99:0,105,1682	0/0:31,0:31:77.27:0,77,1215	0/0:11,0:11:15.03:0,15,221
chr10	109275376	.	AGT	A	81.68	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=5.011;DP=920;FS=1.422;HRun=0;HaplotypeScore=198.3302;InbreedingCoeff=0.7485;MQ=50.31;MQ0=21;MQRankSum=-4.857;QD=1.94;ReadPosRankSum=-1.478;VQSLOD=2.3139;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,1:48:99:0,111,1893	0/0:20,0:20:50.84:0,51,810	0/0:49,0:16:42.05:0,42,600	0/0:39,0:10:18.06:0,18,315	0/0:20,0:19:11.53:0,12,211	0/0:32,0:32:56.79:0,57,979	0/0:37,0:38:78.29:0,78,1374	0/0:59,0:54:99:0,135,2223	0/0:52,0:51:99:0,106,1664	0/0:48,0:44:99:0,117,1957	0/0:22,0:21:41.84:0,42,709	0/1:2,0:2:0:0,0,0	1/1:6,3:9:8.70:93,9,0	0/1:1,0:1:0:0,0,0	1/1:1,2:2:3.01:41,3,0	0/0:62,0:61:99:0,175,2987	0/0:48,0:48:99:0,123,2019	0/0:31,0:29:81.56:0,82,1239	0/0:25,0:21:60.20:0,60,1033	0/0:18,0:18:41.87:0,42,709	0/0:123,0:118:99:0,307,5232	1/1:7,3:10:6.16:53,6,0	1/1:6,1:7:2.80:20,3,0	0/1:10,0:10:0:0,0,0	0/0:40,0:40:71.29:0,71,1205	0/0:51,0:49:99:0,147,2401	0/0:31,0:31:75.23:0,75,1247	0/0:20,0:19:39.09:0,39,606
chr10	109275385	.	ATG	A	34.79	PASS	AB=0.933;AC=9;AF=0.161;AN=56;BaseQRankSum=5.274;DP=917;FS=5.477;HRun=0;HaplotypeScore=200.2815;InbreedingCoeff=0.5636;MQ=50.14;MQ0=23;MQRankSum=-4.836;QD=1.34;ReadPosRankSum=-3.161;VQSLOD=1.7338;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,1:42:92.98:0,93,1552	0/0:21,0:21:57.19:0,57,972	0/0:49,0:17:45.09:0,45,685	0/0:38,0:10:16.30:0,16,263	0/0:22,0:21:11.53:0,12,206	0/0:27,0:28:34.21:0,34,812	0/0:36,0:36:69.07:0,69,1172	0/0:66,0:60:99:0,132,2151	0/0:50,2:51:92.01:0,92,1480	0/0:45,0:41:99:0,108,1824	0/0:20,0:19:35.83:0,36,621	0/1:2,0:2:0:0,0,0	0/1:6,2:8:9.07:70,0,9	1/1:2,0:2:0.89:2,1,0	1/1:1,2:2:3:40,3,0	0/0:63,0:61:99:0,160,2704	0/0:44,0:43:68.46:0,68,1704	0/0:29,0:27:71.44:0,71,1147	0/0:27,0:23:57.13:0,57,903	0/0:21,0:21:38.55:0,39,648	0/0:133,0:127:99:0,328,5450	1/1:8,0:7:3:28,3,0	0/1:3,0:3:0.04:0,0,0	0/0:9,0:9:2.69:0,3,51	0/0:38,0:38:25.29:0,25,823	0/0:54,0:52:99:0,150,2517	0/0:30,0:30:66.20:0,66,1113	0/0:23,0:22:45.15:0,45,777
chr10	109275398	.	A	AGT	3193.50	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-0.755;DP=884;FS=0.000;HRun=0;HaplotypeScore=201.2818;InbreedingCoeff=0.7805;MQ=50.86;MQ0=19;MQRankSum=2.515;QD=17.36;ReadPosRankSum=0.633;VQSLOD=3.5366;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,103,1261	0/0:22,0:22:54.17:0,54,671	0/0:33,0:12:11.86:0,12,213	0/0:32,0:10:14.71:0,15,151	1/1:9,11:19:8.17:147,8,0	1/1:14,15:29:39.90:611,40,0	1/1:25,11:37:62.33:909,62,0	0/0:53,0:49:98.91:0,99,1156	1/1:23,25:47:80.20:1186,80,0	0/0:41,0:40:99:0,102,1235	0/0:19,0:20:38.79:0,39,438	0/1:2,0:2:0.01:0,0,0	0/0:7,0:7:5.92:0,6,39	0/0:2,0:2:0.47:0,0,1	0/0:5,0:4:3:0,3,34	0/0:63,1:62:99:0,151,1887	0/0:45,0:44:96.28:0,96,1210	0/0:31,0:29:61.81:0,62,848	0/0:21,0:17:35.94:0,36,413	0/0:21,0:22:30.10:0,30,376	0/0:133,0:128:99:0,272,3445	0/0:6,0:5:0:0,0,0	0/0:1,0:1:0:0,0,0	1/1:12,0:12:0.89:2,1,0	1/1:22,14:35:19.05:500,19,0	0/0:55,0:54:99:0,135,1626	0/0:30,0:30:66.18:0,66,795	0/0:28,0:27:63.13:0,63,712
chr10	109275432	.	TGTGTATGA	T	298.59	PASS	AB=0.647;AC=7;AF=0.135;AN=52;BaseQRankSum=6.649;DP=824;FS=0.000;HRun=0;HaplotypeScore=289.0287;InbreedingCoeff=0.7839;MQ=51.09;MQ0=22;MQRankSum=-6.225;QD=11.06;ReadPosRankSum=-3.279;VQSLOD=1.3526;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:53:99:0,141,4119	0/0:19,0:19:51.14:0,51,1836	0/0:29,0:9:27.04:0,27,708	0/0:35,0:15:38.32:0,38,1212	0/0:25,0:24:27.07:0,27,808	0/0:24,0:24:41.52:0,42,1167	0/0:31,0:31:68.96:0,69,1933	0/0:55,0:48:99:0,114,2928	0/0:34,0:34:39.07:0,39,1177	0/0:38,0:38:99:0,108,4162	0/0:18,0:18:41.88:0,42,1775	1/1:2,4:6:8.57:173,9,0	1/1:2,4:6:17.58:173,18,0	1/1:0,4:4:3.01:74,3,0	0/0:3,3:6:5.75:0,6,31	0/0:65,0:64:99:0,181,6828	0/0:40,0:39:99:0,114,3285	0/0:30,0:28:61.57:0,62,2065	0/0:20,0:11:23.75:0,24,686	0/0:17,0:17:18.36:0,18,1114	0/0:122,0:114:99:0,304,9364	./.	./.	0/1:5,6:11:0.01:0,0,0	0/0:24,0:23:4.44:0,4,538	0/0:45,0:44:99:0,116,3877	0/0:32,0:31:66.02:0,66,2128	0/0:28,0:27:63.22:0,63,2134
chr10	109275440	.	A	AGT	18137.31	PASS	AB=1.000;AC=38;AF=0.731;AN=52;BaseQRankSum=-7.471;DP=854;FS=17.365;HRun=0;HaplotypeScore=163.4882;InbreedingCoeff=0.8057;MQ=52.54;MQ0=13;MQRankSum=2.780;QD=28.43;ReadPosRankSum=-0.217;VQSLOD=4.6705;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,30:53:53.11:1822,53,0	0/0:18,0:18:36.12:0,36,458	0/0:34,0:16:32.92:0,33,315	0/0:35,0:16:35.42:0,35,335	1/1:9,17:25:23.75:361,24,0	1/1:12,12:24:24.97:403,25,0	1/1:9,23:32:65.38:1046,65,0	1/1:13,33:44:99:1542,108,0	1/1:15,18:33:26.27:380,26,0	0/0:39,0:39:93.30:0,93,1182	0/0:18,0:18:48.15:0,48,605	1/1:12,0:12:5.80:32,6,0	0/1:11,0:11:13.08:105,0,13	1/1:7,0:7:2.96:19,3,0	1/1:7,0:7:5.84:36,6,0	0/0:63,1:64:99:0,159,1923	1/1:10,30:39:99:1600,99,0	1/1:17,15:29:67.68:1010,68,0	1/1:4,17:15:42.10:630,42,0	1/1:3,15:18:29.55:490,30,0	1/1:47,74:114:99:4586,289,0	./.	./.	0/1:14,0:14:0:0,0,0	1/1:11,15:25:26.36:351,26,0	1/1:5,43:48:52.91:1820,53,0	1/1:3,29:31:56.90:953,57,0	1/1:5,24:28:57.19:953,57,0
chr10	109275460	.	TGAATATGC	T	898.64	PASS	AB=0.615;AC=9;AF=0.173;AN=52;BaseQRankSum=6.247;DP=867;FS=0.711;HRun=0;HaplotypeScore=305.1759;InbreedingCoeff=0.8384;MQ=55.59;MQ0=8;MQRankSum=-5.208;QD=13.62;ReadPosRankSum=-2.938;VQSLOD=1.4787;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:54:99:0,110,5471	0/0:16,0:16:48.08:0,48,1505	0/0:36,0:24:46.24:0,46,1635	0/0:31,0:21:22.40:0,22,1879	0/0:23,0:23:31.24:0,31,1322	0/0:22,0:22:39.28:0,39,1135	0/0:27,0:27:61.48:0,61,1890	0/0:52,0:52:99:0,133,5643	0/0:33,0:33:51.13:0,51,1663	0/0:43,0:43:99:0,129,5292	0/0:24,0:24:66.23:0,66,2738	1/1:1,15:16:11.33:246,11,0	1/1:1,14:15:29.13:639,29,0	1/1:1,11:11:3.01:78,3,0	0/1:3,5:8:0:1,0,0	0/0:52,0:51:99:0,145,5673	0/0:46,0:45:99:0,127,4617	0/0:27,0:24:30.53:0,31,2479	0/0:30,0:28:81.28:0,81,3118	0/0:17,0:17:42.91:0,43,1485	0/0:118,0:114:99:0,278,11442	./.	./.	1/1:5,10:15:2.43:70,2,0	0/0:24,0:24:31.11:0,31,942	0/0:58,0:57:99:0,166,6270	0/0:26,0:25:59.78:0,60,2107	0/0:31,0:30:81.27:0,81,2905
chr10	109275508	.	A	AGT	4145.92	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.826;DP=1056;FS=5.920;HRun=0;HaplotypeScore=239.3465;InbreedingCoeff=0.9694;MQ=53.93;MQ0=8;MQRankSum=1.238;QD=24.83;ReadPosRankSum=2.376;VQSLOD=3.6848;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:67,0:67:99:0,150,1839	0/0:8,0:8:24.04:0,24,280	0/0:36,0:17:26.83:0,27,260	0/0:39,0:23:50.95:0,51,566	1/1:8,25:32:55.24:937,55,0	1/1:7,27:35:48.21:813,48,0	1/1:12,17:29:36.06:507,36,0	0/0:58,0:56:99:0,117,1347	1/1:20,28:48:89.94:1400,90,0	0/0:64,0:63:99:0,180,2138	0/0:28,0:28:75.24:0,75,972	0/0:35,0:35:47.10:0,47,590	0/0:38,0:38:86.91:0,87,1010	0/0:22,0:21:26.82:0,27,313	0/0:47,0:47:83.96:0,84,1010	0/0:50,0:50:99:0,126,1536	0/0:36,0:36:99:0,99,1243	0/0:33,0:30:64.85:0,65,1013	0/0:28,0:26:57.06:0,57,691	0/0:29,0:29:81.19:0,81,967	0/0:107,0:106:99:0,253,3063	0/0:15,0:14:6.02:0,6,78	0/0:13,0:13:15.03:0,15,180	0/0:32,0:31:17.70:0,18,220	1/1:13,9:22:31.83:489,32,0	0/0:50,0:49:99:0,123,1547	0/0:27,0:26:59.67:0,60,644	0/0:26,0:26:69.05:0,69,811
chr10	109275575	.	GTA	G	1590.18	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=13.027;DP=910;FS=43.926;HRun=0;HaplotypeScore=236.5098;InbreedingCoeff=0.5924;MQ=53.62;MQ0=14;MQRankSum=-8.173;QD=9.88;ReadPosRankSum=-1.300;VQSLOD=1.7917;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,1:49:99:0,132,2356	0/0:12,0:12:33.11:0,33,618	0/0:37,0:19:42.30:0,42,769	0/0:32,1:18:37.86:0,38,634	0/0:22,0:22:29.76:0,30,429	0/0:23,0:23:32.10:0,32,459	0/0:28,0:28:51.14:0,51,962	0/0:41,0:40:99:0,117,2033	0/0:34,0:34:61.79:0,62,1175	0/0:56,0:56:99:0,147,2833	0/0:30,1:31:41.07:0,41,1495	0/1:26,0:26:43.24:331,0,43	0/1:24,0:24:60:261,0,60	1/1:16,0:16:3.72:183,4,0	0/1:43,0:42:36.35:517,0,36	0/0:51,0:50:99:0,144,2638	0/0:25,0:25:70.07:0,70,1206	0/0:29,2:31:56.74:0,57,1336	0/0:14,0:9:24.06:0,24,429	0/0:27,0:27:74.92:0,75,1320	0/0:113,0:112:99:0,290,5110	1/1:11,0:11:14.28:107,14,0	1/1:13,0:13:14.08:258,14,0	1/1:26,2:27:9.25:94,9,0	0/0:25,0:25:31.17:0,31,540	0/0:40,0:40:99:0,117,2164	0/0:33,0:33:90.29:0,90,1642	0/0:24,0:24:72.20:0,72,1312
chr10	109275592	.	AGT	A	2790.77	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=13.167;DP=847;FS=59.705;HRun=0;HaplotypeScore=229.2720;InbreedingCoeff=0.9012;MQ=50.02;MQ0=20;MQRankSum=-9.412;QD=19.25;ReadPosRankSum=-3.844;VQSLOD=1.5281;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,120,2260	0/0:12,0:12:36.11:0,36,635	0/0:41,0:17:47.26:0,47,739	0/0:40,0:18:53.85:0,54,749	0/0:23,0:23:7.29:0,7,272	0/0:24,0:24:28.78:0,29,390	0/0:26,0:26:29.97:0,30,515	0/0:45,0:45:99:0,129,2427	0/0:31,0:31:46.22:0,46,829	0/0:51,0:51:99:0,148,2835	0/0:26,0:26:50.99:0,51,1331	1/1:6,17:23:50.95:710,51,0	1/1:3,12:15:29.12:416,29,0	1/1:6,6:12:14.64:233,15,0	1/1:8,20:27:58.04:866,58,0	0/0:47,0:46:99:0,135,2586	0/0:26,0:26:69.16:0,69,1263	0/0:33,0:33:84.29:0,84,1607	0/0:12,0:9:27.08:0,27,481	0/0:28,0:28:68.93:0,69,1228	0/0:101,0:100:99:0,252,4852	1/1:5,3:8:14.56:189,15,0	1/1:2,9:11:30.02:414,30,0	1/1:16,5:21:15.16:152,15,0	0/1:27,0:27:6.54:7,0,376	0/0:36,0:36:99:0,108,2027	0/0:28,0:28:75.24:0,75,1413	0/0:26,0:26:78.20:0,78,1422
chr10	109275606	.	AGAGAGT	A	3937.49	PASS	AB=0.719;AC=22;AF=0.393;AN=56;BaseQRankSum=12.661;DP=792;FS=55.840;HRun=0;HaplotypeScore=259.6604;InbreedingCoeff=0.6792;MQ=47.97;MQ0=21;MQRankSum=-12.071;QD=18.23;ReadPosRankSum=-4.972;VQSLOD=0.9722;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,119,4327	0/1:9,1:10:46.65:47,0,874	0/0:40,0:13:33.08:0,33,535	0/0:41,0:13:39.13:0,39,744	1/1:5,16:21:16.19:350,16,0	0/1:5,15:20:99:418,0,173	1/1:8,15:23:17.61:492,18,0	0/0:46,0:45:99:0,132,3521	1/1:3,21:24:33.08:744,33,0	0/0:43,0:43:84.80:0,85,4313	0/0:26,0:26:71.79:0,72,2613	1/1:7,6:17:18.17:236,18,0	0/1:5,3:13:9.54:333,0,10	1/1:8,3:13:11.57:122,12,0	1/1:3,8:15:29.25:314,29,0	0/0:40,0:38:99:0,114,4073	0/0:25,0:25:66.23:0,66,2443	0/0:35,0:35:99:0,99,3221	0/0:16,0:13:39.13:0,39,955	0/0:23,0:23:45.38:0,45,1655	0/0:104,0:102:99:0,250,8523	1/1:4,2:7:5.15:55,5,0	1/1:1,6:9:20.96:249,21,0	0/1:15,3:21:0.54:31,0,1	1/1:4,18:21:0.51:547,1,0	0/0:37,0:37:99:0,111,3583	0/0:28,0:28:68.57:0,69,2186	0/0:26,0:26:78.22:0,78,2547
chr10	109275608	.	AGAG	A	993.19	PASS	AB=0.863;AC=17;AF=0.304;AN=56;BaseQRankSum=11.764;DP=781;FS=21.241;HRun=0;HaplotypeScore=235.6127;InbreedingCoeff=0.3869;MQ=46.91;MQ0=19;MQRankSum=-10.573;QD=4.87;ReadPosRankSum=-1.329;VQSLOD=0.8386;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,120,2821	0/0:10,0:10:9.16:0,9,563	0/0:40,0:11:30.03:0,30,592	0/0:41,0:14:39.12:0,39,808	1/1:19,0:20:11.69:76,12,0	0/1:19,0:19:71.53:72,0,307	1/1:23,0:23:17.82:120,18,0	0/0:43,0:42:99:0,120,2756	1/1:24,0:24:24.13:177,24,0	0/0:44,0:43:99:0,109,2857	0/0:28,0:27:74.93:0,75,1749	0/1:13,4:17:24.40:94,0,24	0/1:8,5:13:47.24:171,0,47	1/1:11,2:13:4.99:66,5,0	0/1:11,5:15:6.95:90,0,7	0/0:38,0:36:99:0,108,2589	0/0:28,0:28:75.26:0,75,1750	0/0:34,0:34:93.05:0,93,2069	0/0:14,0:12:36.12:0,36,863	0/0:24,0:24:48.39:0,48,1146	0/0:103,0:100:99:0,247,5728	0/1:6,1:7:16.46:20,0,16	1/1:7,2:9:15.04:161,15,0	0/1:18,3:21:16.27:16,0,41	0/1:22,0:21:58.30:115,0,58	0/0:34,0:34:99:0,102,2346	0/0:27,0:27:66.14:0,66,1462	0/0:24,0:24:72.25:0,72,1683
chr10	109275610	.	AGT	A	901.16	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=14.123;DP=774;FS=35.011;HRun=0;HaplotypeScore=226.2395;InbreedingCoeff=0.7917;MQ=46.75;MQ0=17;MQRankSum=-12.162;QD=4.42;ReadPosRankSum=-3.740;VQSLOD=1.2525;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,114,2219	0/0:10,0:10:11.31:0,11,423	0/0:39,0:11:30.01:0,30,491	0/0:39,0:13:38.55:0,39,619	1/1:20,0:20:12.81:70,13,0	0/1:20,0:20:63.21:63,0,197	1/1:23,0:23:21.55:117,22,0	0/0:41,0:40:99:0,117,2039	1/1:23,0:23:26.18:157,26,0	0/0:44,0:43:99:0,103,2263	0/0:27,0:26:71.83:0,72,1350	1/1:10,7:17:18.51:141,19,0	1/1:8,5:13:28.19:225,28,0	1/1:9,4:13:3.84:13,4,0	1/1:14,2:15:11.34:78,11,0	0/0:39,0:37:99:0,111,2101	0/0:28,0:28:75.20:0,75,1334	0/0:32,0:32:89.86:0,90,1554	0/0:15,0:13:37.68:0,38,646	0/0:27,0:27:54.30:0,54,948	0/0:100,0:97:99:0,237,4329	1/1:4,3:7:7.09:38,7,0	1/1:10,0:10:11.64:45,12,0	1/1:17,3:20:15.22:61,15,0	0/1:22,0:21:29.93:103,0,30	0/0:34,0:34:99:0,99,1788	0/0:27,0:27:50.75:0,51,1067	0/0:24,0:24:72.18:0,72,1311
chr10	109275624	.	A	AGT	329.99	PASS	AB=0.991;AC=12;AF=0.214;AN=56;BaseQRankSum=10.515;DP=798;FS=39.812;HRun=0;HaplotypeScore=246.3821;InbreedingCoeff=0.1071;MQ=46.29;MQ0=9;MQRankSum=-9.234;QD=1.84;ReadPosRankSum=-1.059;VQSLOD=1.4653;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,127,1875	0/0:11,0:11:29.83:0,30,400	0/0:43,0:15:42.06:0,42,556	0/0:38,0:12:35.69:0,36,461	0/0:21,1:22:16.38:0,16,106	0/1:25,0:25:18.10:18,0,240	0/0:23,0:23:2.01:0,2,103	0/0:46,0:45:99:0,127,1969	0/1:27,0:26:44.03:84,0,44	0/0:48,0:47:99:0,114,1953	0/0:22,0:21:57.17:0,57,868	0/1:16,0:16:2.48:73,0,2	0/1:17,0:17:38.05:95,0,38	0/1:13,0:13:14.07:14,0,38	0/1:16,0:15:21.72:29,0,22	0/0:43,0:41:99:0,120,1790	0/0:33,0:32:90.21:0,90,1354	0/0:29,0:29:78.66:0,79,1233	0/0:18,0:16:41.75:0,42,675	0/0:28,0:27:52.18:0,52,728	0/0:87,0:85:99:0,205,3162	1/1:7,2:9:5.23:40,5,0	0/1:10,0:10:25.43:25,0,43	1/1:20,0:20:3.66:76,4,0	0/1:24,2:25:24.69:25,0,109	0/0:35,0:34:98.01:0,98,1443	0/0:23,0:23:59.46:0,59,841	0/0:20,0:20:54.18:0,54,833
chr10	109275625	.	A	ATG	2624.04	PASS	AB=0.678;AC=20;AF=0.357;AN=56;BaseQRankSum=12.463;DP=806;FS=77.557;HRun=0;HaplotypeScore=243.8048;InbreedingCoeff=0.6646;MQ=46.04;MQ0=10;MQRankSum=-12.173;QD=11.21;ReadPosRankSum=-5.741;VQSLOD=0.2007;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,114,1399	0/0:11,0:11:27.06:0,27,321	0/0:43,0:16:30.09:0,30,361	0/0:37,0:12:17.63:0,18,191	0/1:13,11:23:5.15:5,0,33	0/1:11,13:25:99:258,0,115	0/1:15,9:24:93.18:192,0,93	0/0:45,0:44:98.51:0,99,1206	1/1:10,19:28:43.58:585,44,0	0/0:48,0:47:99:0,104,1422	0/0:22,0:21:48.03:0,48,574	1/1:9,8:17:28.22:389,28,0	1/1:10,8:18:33.04:500,33,0	1/1:8,6:14:13.87:145,14,0	1/1:10,7:16:10.96:195,11,0	0/0:42,0:40:96.29:0,96,1217	0/0:33,0:32:81.18:0,81,1019	0/0:30,0:30:67.42:0,67,908	0/0:18,0:16:26.35:0,26,346	0/0:28,0:27:53.78:0,54,590	0/0:86,0:85:99:0,186,2296	1/1:6,4:10:11.84:80,12,0	1/1:8,2:10:4.29:72,4,0	1/1:18,3:21:20.16:201,20,0	0/1:12,13:24:48.77:203,0,49	0/0:36,0:35:89.49:0,89,1067	0/0:23,0:23:50.39:0,50,593	0/0:19,0:19:39.13:0,39,500
chr10	109275664	.	TGA	T	3987.89	PASS	AB=0.988;AC=23;AF=0.411;AN=56;BaseQRankSum=-5.227;DP=767;FS=2.244;HRun=0;HaplotypeScore=220.0859;InbreedingCoeff=-0.1659;MQ=45.76;MQ0=28;MQRankSum=2.057;QD=7.45;ReadPosRankSum=-5.003;VQSLOD=2.6965;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:43:43.94:457,0,44	0/0:15,0:15:25.49:0,25,449	0/0:31,0:10:20:0,20,177	0/0:50,0:6:8.28:0,8,69	0/0:19,0:18:3.73:0,4,23	0/1:20,0:20:9.84:10,0,36	0/1:29,0:28:5.77:6,0,41	1/1:39,0:37:81.90:694,82,0	0/1:38,0:37:13.50:14,0,110	0/0:30,0:28:36.68:0,37,664	0/0:16,0:15:39.05:0,39,511	0/1:19,0:19:43.16:43,0,59	0/1:23,0:23:40.39:163,0,40	0/1:24,0:24:67.14:96,0,67	0/1:17,2:17:57.93:73,0,58	0/0:30,0:30:52.61:0,53,1030	0/1:35,0:34:53.44:255,0,53	1/1:18,9:27:68.32:733,68,0	1/1:13,0:7:6.04:48,6,0	0/1:30,0:29:14.19:164,0,14	0/1:63,0:61:54:543,0,54	0/1:15,1:16:49.89:50,0,61	0/0:15,0:15:3.95:0,4,93	0/0:26,0:26:0.25:0,0,65	0/1:25,0:24:1.41:1,0,25	0/1:33,1:32:70.62:379,0,71	0/1:21,0:21:29.87:91,0,30	1/1:17,0:17:5.70:169,6,0
chr10	109275666	.	AGT	A	180.02	PASS	AB=0.967;AC=9;AF=0.167;AN=54;BaseQRankSum=-0.625;DP=762;FS=1.733;HRun=0;HaplotypeScore=229.2987;InbreedingCoeff=0.0103;MQ=45.83;MQ0=28;MQRankSum=2.088;QD=0.88;ReadPosRankSum=0.153;VQSLOD=2.7771;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:11.06:0,11,351	0/1:15,1:16:3.62:4,0,324	0/0:29,0:9:3.48:0,3,43	./.	0/0:19,0:18:8.72:0,9,94	0/0:20,0:20:4.11:0,4,48	0/0:27,0:26:6.01:0,6,71	0/0:36,0:34:11.86:0,12,81	0/1:37,0:36:0.35:0,0,70	0/1:28,4:30:73.89:74,0,228	0/0:17,0:16:24.08:0,24,339	0/0:19,0:19:15.02:0,15,192	0/1:22,0:22:2.66:3,0,153	0/1:24,0:24:17.88:18,0,188	0/0:18,0:17:12.26:0,12,211	0/1:28,2:31:46.07:46,0,745	0/0:35,0:34:49.37:0,49,504	1/1:27,0:27:3.87:148,4,0	0/0:13,0:7:11.90:0,12,92	0/0:30,0:29:17.98:0,18,176	0/0:60,0:58:41.72:0,42,467	0/1:16,0:16:2.88:3,0,164	0/0:15,0:15:23.27:0,23,282	0/0:26,0:26:13.84:0,14,198	0/0:25,0:24:20.39:0,20,184	0/0:34,0:32:21.44:0,21,464	0/0:23,0:23:29.93:0,30,277	0/0:18,0:18:15:0,15,141
chr10	109278754	.	GTTCTGC	G	6535.74	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.618;DP=750;FS=1.865;HRun=0;HaplotypeScore=175.6524;InbreedingCoeff=0.9979;MQ=82.11;MQ0=0;MQRankSum=-14.838;QD=57.84;ReadPosRankSum=-1.142;VQSLOD=5.0116;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,178,6216	0/0:6,0:6:18.06:0,18,601	0/0:30,0:30:84.27:0,84,2702	0/0:31,0:31:75.56:0,76,2294	1/1:0,19:20:45.15:1099,45,0	1/1:0,26:26:66.23:1616,66,0	1/1:1,16:17:42.14:1031,42,0	0/0:19,0:19:54.18:0,54,1774	1/1:0,32:32:72.25:1760,72,0	0/0:28,0:27:81.28:0,81,2842	0/0:10,0:10:30.10:0,30,1077	0/0:40,0:40:99:0,117,3973	0/0:35,0:35:99:0,105,3771	0/0:26,0:26:78.27:0,78,2789	0/0:31,0:31:93.32:0,93,3220	0/0:28,0:28:84.29:0,84,3068	0/0:25,0:25:75.26:0,75,2451	0/0:34,0:34:99:0,99,3395	0/0:27,0:27:75.26:0,75,2401	0/0:14,0:14:42.14:0,42,1442	0/0:65,0:65:99:0,196,6767	0/0:15,0:15:42.14:0,42,1397	0/0:16,0:16:48.16:0,48,1739	0/0:42,0:42:99:0,121,4320	1/1:0,18:18:42.14:1031,42,0	0/0:24,0:24:72.24:0,72,2288	0/0:19,0:19:57.20:0,57,1921	0/0:13,0:13:36.12:0,36,1269
chr10	109281059	.	TAC	T	940.06	PASS	AB=0.989;AC=15;AF=0.268;AN=56;BaseQRankSum=10.847;DP=530;FS=3.663;HRun=0;HaplotypeScore=88.7155;InbreedingCoeff=-0.1455;MQ=72.25;MQ0=1;MQRankSum=-2.076;QD=3.32;ReadPosRankSum=12.098;VQSLOD=-0.6639;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.09:0,60,754	0/0:6,0:6:15.03:0,15,232	0/1:15,0:14:7.88:8,0,296	0/1:9,0:8:4.88:5,0,59	0/1:12,0:12:33.76:34,0,45	0/1:17,0:17:9.20:88,0,9	0/1:27,0:27:42.12:103,0,42	0/0:20,0:20:53.88:0,54,577	0/1:16,0:16:63.52:64,0,69	0/0:22,0:22:59.90:0,60,753	0/0:12,0:12:24.07:0,24,373	1/1:35,0:35:2.91:169,3,0	0/1:21,1:22:53.37:103,0,53	0/1:25,2:27:71.98:155,0,72	0/1:28,1:29:11.45:142,0,11	0/0:24,0:24:69.14:0,69,1112	0/0:24,0:24:64.81:0,65,854	0/0:25,0:25:50.97:0,51,636	0/0:15,0:15:42.46:0,42,491	0/0:14,0:14:42.07:0,42,509	0/0:19,0:18:29.94:0,30,300	0/1:16,0:16:29.19:29,0,62	0/1:12,0:12:2.95:45,0,3	0/1:30,0:30:72.11:119,0,72	0/1:16,0:16:29.62:30,0,104	0/0:14,0:14:39.02:0,39,468	0/0:16,0:16:19.01:0,19,232	0/0:13,0:13:23.88:0,24,268
chr10	109281060	.	ACC	A	5331.60	PASS	AB=0.911;AC=26;AF=0.464;AN=56;BaseQRankSum=0.388;DP=526;FS=2.409;HRun=11;HaplotypeScore=74.5382;InbreedingCoeff=0.8697;MQ=71.15;MQ0=1;MQRankSum=1.020;QD=19.46;ReadPosRankSum=8.694;VQSLOD=3.3681;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:24:45.42:0,45,425	0/0:5,0:6:14.51:0,15,149	0/1:12,0:13:9.04:9,0,190	0/1:7,0:7:0.80:1,0,36	1/1:2,7:11:20.52:184,21,0	1/1:1,15:17:33.04:407,33,0	1/1:4,23:27:54.12:575,54,0	0/0:20,0:21:17.97:0,18,192	1/1:4,11:15:30.05:319,30,0	0/0:19,0:21:28.08:0,28,347	0/0:13,0:13:21.01:0,21,251	1/1:2,33:35:75.18:798,75,0	1/1:5,17:22:39.09:415,39,0	1/1:5,18:24:55.56:584,56,0	1/1:4,25:29:69.16:734,69,0	0/0:25,0:25:59.55:0,60,734	0/0:16,0:23:56.06:0,56,557	0/0:8,0:24:39.01:0,39,373	0/0:15,0:17:36.02:0,36,389	0/0:12,0:16:26.95:0,27,265	0/0:14,0:18:8.55:0,9,78	1/1:3,11:15:13.74:157,14,0	1/1:1,11:12:24.06:256,24,0	1/1:5,24:29:60.14:639,60,0	1/1:6,10:16:24.02:255,24,0	0/0:14,0:14:23.92:0,24,193	0/0:3,0:16:17.38:0,17,157	0/0:8,0:13:9.02:0,9,104
chr10	109287014	.	GT	G	4155.74	PASS	AB=0.951;AC=43;AF=0.768;AN=56;BaseQRankSum=-2.550;DP=453;FS=4.401;HRun=6;HaplotypeScore=59.2562;InbreedingCoeff=0.6366;MQ=64.59;MQ0=4;MQRankSum=1.612;QD=11.54;ReadPosRankSum=0.818;VQSLOD=1.7082;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,1:18:7.47:191,7,0	0/1:7,0:7:1.99:2,0,142	0/0:26,0:6:10.88:0,11,95	0/0:23,0:13:14.63:0,15,122	1/1:5,20:25:43.58:323,44,0	1/1:6,15:21:24.99:252,25,0	1/1:1,8:8:2.94:18,3,0	1/1:33,0:33:40.93:405,41,0	1/1:0,13:13:30.03:303,30,0	0/0:17,0:19:54.06:0,54,622	0/0:21,0:21:40.81:0,41,569	1/1:3,9:12:12.03:128,12,0	1/1:1,14:15:29.90:294,30,0	1/1:0,7:7:2.99:24,3,0	1/1:2,10:12:18.04:192,18,0	0/0:4,0:4:12.02:0,12,130	0/1:26,1:27:1.74:228,0,2	1/1:21,0:21:11.10:163,11,0	1/1:20,0:19:15.31:169,15,0	1/1:29,1:30:26.13:281,26,0	0/1:7,1:8:3.16:47,0,3	1/1:1,0:1:2.94:18,3,0	1/1:2,4:6:11.35:118,11,0	1/1:1,7:8:12.03:128,12,0	1/1:10,7:20:50.87:393,51,0	1/1:15,1:16:18.51:226,19,0	1/1:11,1:12:2.71:52,3,0	1/1:18,0:17:24.12:201,24,0
chr10	109287722	.	CGTTTGTTT	C	4201.06	PASS	AB=0.815;AC=13;AF=0.241;AN=54;BaseQRankSum=11.726;DP=749;FS=1.711;HRun=0;HaplotypeScore=182.6956;InbreedingCoeff=0.8941;MQ=74.04;MQ0=2;MQRankSum=-11.513;QD=23.34;ReadPosRankSum=-2.685;VQSLOD=2.9539;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:95.14:0,95,3684	0/0:10,0:10:9.03:0,9,369	./.	0/0:32,0:28:9.03:0,9,147	0/0:27,0:27:42.14:0,42,1657	0/0:24,0:24:51.18:0,51,1967	0/0:30,0:30:45.15:0,45,1773	0/0:26,0:26:9.03:0,9,193	0/0:23,0:23:42.13:0,42,1558	0/0:29,0:31:39.09:0,39,1032	0/0:25,0:25:48.16:0,48,1843	1/1:6,15:21:27.09:675,27,0	1/1:9,9:18:24.08:560,24,0	1/1:16,14:30:39.13:974,39,0	1/1:11,16:27:36.12:751,36,0	0/0:19,0:19:30.10:0,30,1231	0/0:29,0:29:60.17:0,60,2072	0/0:31,0:31:60.21:0,60,2369	0/0:23,0:23:24.97:0,25,792	0/0:29,0:29:66.23:0,66,2411	0/0:28,0:28:39.12:0,39,1436	1/1:12,11:23:21.07:407,21,0	1/1:7,10:17:20.81:484,21,0	0/1:34,10:44:3.75:350,0,4	0/0:31,0:31:54.19:0,54,2101	0/0:27,0:27:51.18:0,51,1990	0/0:25,0:25:48.15:0,48,1568	0/0:9,0:9:18.06:0,18,738
chr10	109289727	.	A	ACG	8373.36	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=6.346;DP=935;FS=3.317;HRun=0;HaplotypeScore=135.9753;InbreedingCoeff=0.7864;MQ=68.54;MQ0=19;MQRankSum=-0.502;QD=24.70;ReadPosRankSum=8.938;VQSLOD=5.1172;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.09:0,90,1238	0/0:17,0:17:51.11:0,51,690	0/0:49,0:22:55.27:0,55,623	0/0:56,0:29:63.91:0,64,730	0/0:31,0:31:25.08:0,25,254	0/0:25,0:25:3.37:0,3,85	0/1:32,0:32:1.24:1,0,186	0/0:31,0:31:87.14:0,87,1062	0/1:39,0:39:20.23:20,0,157	0/0:35,0:35:99:0,102,1359	0/0:32,0:32:73.57:0,74,1176	1/1:3,39:42:73.52:1655,74,0	1/1:1,34:36:51:968,51,0	1/1:1,26:26:56.85:1032,57,0	1/1:2,42:41:63.19:1530,63,0	0/0:28,0:28:84.11:0,84,1063	0/0:40,0:40:99:0,117,1669	0/0:22,0:22:61.54:0,62,729	0/0:19,0:18:48.09:0,48,686	0/0:24,0:24:66.15:0,66,898	0/0:85,0:84:99:0,250,3434	1/1:2,36:37:54.29:1199,54,0	1/1:0,18:20:35.80:690,36,0	1/1:2,30:33:68.82:1276,69,0	0/1:28,0:27:1.85:2,0,102	0/0:30,0:30:87.69:0,88,1160	0/0:28,0:28:75.07:0,75,1024	0/0:11,0:11:33.04:0,33,415
chr10	109290282	.	G	GCACA	3446.10	PASS	AB=0.805;AC=21;AF=0.404;AN=52;BaseQRankSum=-4.006;DP=621;FS=5.187;HRun=0;HaplotypeScore=115.5768;InbreedingCoeff=0.4672;MQ=58.30;MQ0=11;MQRankSum=-0.556;QD=11.34;ReadPosRankSum=-1.631;VQSLOD=2.8058;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:25:10.85:0,11,305	0/0:10,0:11:17.94:0,18,203	./.	./.	0/0:13,0:17:2.74:0,3,47	1/1:19,0:19:12.02:174,12,0	1/1:30,0:30:21.94:265,22,0	0/1:24,0:23:32.08:32,0,50	0/1:14,9:27:8.21:401,0,8	0/0:24,0:22:26.97:0,27,340	0/0:12,0:12:18:0,18,198	0/1:12,12:27:26.37:288,0,26	0/1:12,3:20:29.73:207,0,30	1/1:12,7:22:14.52:237,15,0	1/1:8,13:22:23.82:508,24,0	0/0:19,0:19:10.84:0,11,368	0/0:33,0:44:60.04:0,60,822	0/0:20,0:24:27.07:0,27,365	0/0:11,0:11:3:0,3,27	0/0:11,0:11:12.04:0,12,184	0/0:58,0:65:34.06:0,34,669	1/1:8,7:17:3.01:71,3,0	1/1:5,2:9:2.96:71,3,0	1/1:18,20:44:9.58:1024,10,0	1/1:6,0:15:11.78:157,12,0	0/1:19,0:23:9.37:9,0,285	0/0:11,0:12:18.02:0,18,215	0/0:11,0:11:13.82:0,14,163
chr10	109291520	.	GGT	G	6624.90	PASS	AB=0.500;AC=53;AF=0.981;AN=54;BaseQRankSum=-7.301;DP=448;FS=16.091;HRun=0;HaplotypeScore=598.1229;InbreedingCoeff=0.0492;MQ=28.97;MQ0=0;MQRankSum=1.615;QD=14.79;ReadPosRankSum=1.302;VQSLOD=2.8169;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,11:13:26.46:183,26,0	1/1:2,8:10:14.64:120,15,0	1/1:1,0:1:2.37:8,2,0	./.	1/1:9,0:28:33.95:243,34,0	1/1:2,0:12:18.61:102,19,0	1/1:7,0:14:18.86:138,19,0	1/1:6,11:17:29.23:500,29,0	1/1:5,0:13:24.80:145,25,0	1/1:7,27:34:56.32:573,56,0	1/1:6,20:26:58.98:419,59,0	1/1:6,0:14:15.38:132,15,0	1/1:3,0:15:10.19:125,10,0	1/1:7,0:17:39.84:236,40,0	1/1:3,0:11:28.07:153,28,0	1/1:3,18:22:44.81:354,45,0	1/1:0,10:10:28.65:209,29,0	1/1:1,2:3:5.97:66,6,0	1/1:4,14:18:45.08:628,45,0	1/1:3,21:24:37.20:336,37,0	1/1:3,3:6:6.81:37,7,0	1/1:11,0:31:64.42:358,64,0	1/1:11,0:24:43.93:252,44,0	1/1:2,0:5:10.83:53,11,0	1/1:6,0:22:30.85:204,31,0	1/1:4,24:28:9.77:533,10,0	1/1:2,17:19:41.59:375,42,0	0/1:0,10:10:13.40:141,0,13
chr10	109291536	.	TG	T	2060.37	PASS	AB=0.504;AC=37;AF=0.712;AN=52;BaseQRankSum=-2.298;DP=278;FS=39.608;HRun=1;HaplotypeScore=559.9609;InbreedingCoeff=0.1546;MQ=28.97;MQ0=0;MQRankSum=-1.934;QD=7.77;ReadPosRankSum=-2.021;VQSLOD=0.4243;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:6:3.76:33,4,0	1/1:0,7:7:9.01:66,9,0	./.	./.	1/1:0,21:21:18.36:125,18,0	0/1:0,11:11:21.49:50,0,21	0/0:0,7:7:2.27:0,2,6	1/1:0,4:4:2.22:7,2,0	0/1:1,9:10:1.26:57,0,1	0/1:0,23:23:8.96:136,0,9	1/1:0,14:14:14.77:123,15,0	0/1:0,9:9:7.43:22,0,7	1/1:0,13:13:11.14:117,11,0	1/1:0,11:11:19.72:166,20,0	1/1:0,9:9:19.24:139,19,0	1/1:0,13:13:31.47:161,31,0	0/1:0,3:3:5.94:23,0,6	0/0:0,2:2:2.74:0,3,12	0/0:0,2:2:3.15:0,3,12	1/1:0,13:13:9.85:124,10,0	0/0:0,2:2:5.42:0,5,23	1/1:0,21:21:1.10:172,1,0	0/1:0,14:14:7.18:29,0,7	1/1:0,3:3:5.92:41,6,0	1/1:0,17:17:10.11:129,10,0	0/1:0,21:21:6.91:175,0,7	1/1:0,17:17:22.29:224,22,0	1/1:0,5:5:13.93:80,14,0
chr10	109291551	.	TG	T	6644.45	PASS	AB=0.500;AC=43;AF=0.827;AN=52;BaseQRankSum=-3.600;DP=377;FS=54.061;HRun=2;HaplotypeScore=722.3963;InbreedingCoeff=0.4469;MQ=28.92;MQ0=0;MQRankSum=-1.679;QD=17.91;ReadPosRankSum=-6.350;VQSLOD=0.3192;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:11.52:124,12,0	1/1:0,9:9:15.47:167,15,0	./.	./.	1/1:0,25:25:36.87:347,37,0	0/1:0,15:15:6.26:240,0,6	0/1:0,9:9:0.15:33,0,0	1/1:0,9:9:1.11:4,1,0	1/1:0,15:15:22.19:289,22,0	1/1:0,27:27:11.07:396,11,0	1/1:0,19:19:30.81:355,31,0	1/1:0,14:14:20.93:253,21,0	1/1:0,16:15:23.12:263,23,0	1/1:0,13:13:28.87:338,29,0	1/1:0,14:14:34.47:398,34,0	1/1:0,22:22:61.34:577,61,0	0/1:0,4:4:8.68:27,0,9	0/0:0,2:2:2.87:0,3,15	0/0:0,2:2:3.15:0,3,12	1/1:0,17:17:21:284,21,0	0/0:0,2:2:5.42:0,5,23	1/1:0,27:27:19.37:464,19,0	1/1:0,20:20:14.60:287,15,0	1/1:0,3:3:6.02:74,6,0	1/1:0,22:22:29.63:424,30,0	1/1:0,31:31:23.31:561,23,0	1/1:0,25:25:58.83:596,59,0	1/1:0,6:6:16.98:144,17,0
chr10	109291564	.	AG	A	5287.88	PASS	AB=0.500;AC=45;AF=0.900;AN=50;BaseQRankSum=-5.731;DP=306;FS=74.046;HRun=3;HaplotypeScore=637.5392;InbreedingCoeff=0.3404;MQ=28.90;MQ0=0;MQRankSum=-0.139;QD=17.39;ReadPosRankSum=-2.091;VQSLOD=0.2883;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:14.43:154,14,0	1/1:0,9:9:15.30:158,15,0	./.	./.	1/1:0,20:20:25.91:244,26,0	0/1:0,14:14:10.56:198,0,11	1/1:0,3:3:6.02:72,6,0	1/1:0,9:9:10.29:80,10,0	1/1:0,11:11:19.68:223,20,0	1/1:0,19:19:19.76:282,20,0	1/1:0,19:19:34.05:381,34,0	1/1:1,13:14:18.82:242,19,0	1/1:0,13:12:14.01:149,14,0	1/1:0,7:7:10.46:109,10,0	1/1:0,12:12:28.44:316,28,0	1/1:0,22:22:61.25:575,61,0	1/1:0,1:1:2.84:14,3,0	1/1:0,1:1:3.01:36,3,0	0/0:0,1:1:2.68:0,3,11	1/1:0,15:15:15.47:232,15,0	0/0:0,1:1:2.74:0,3,12	1/1:0,17:17:1.47:204,1,0	1/1:0,20:20:15.01:305,15,0	./.	1/1:0,20:20:26.52:371,27,0	1/1:0,25:25:4.87:375,5,0	1/1:0,20:20:42.66:429,43,0	1/1:0,6:6:16.98:140,17,0
chr10	109291584	.	GT	G	4374.11	PASS	AB=0.500;AC=49;AF=0.907;AN=54;BaseQRankSum=-8.587;DP=423;FS=117.928;HRun=1;HaplotypeScore=733.9679;InbreedingCoeff=0.3298;MQ=31.40;MQ0=0;MQRankSum=-1.789;QD=10.39;ReadPosRankSum=3.169;VQSLOD=0.7671;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:14.66:87,15,0	1/1:0,11:11:13.09:118,13,0	1/1:1,0:1:2.98:22,3,0	./.	1/1:1,25:26:26.52:193,27,0	1/1:0,22:22:4.33:204,4,0	1/1:0,6:6:14.78:96,15,0	1/1:0,19:19:29.57:161,30,0	1/1:0,12:12:13.42:120,13,0	1/1:0,26:26:32.58:236,33,0	1/1:0,25:25:39.13:262,39,0	1/1:0,18:18:11.44:173,11,0	1/1:0,17:16:7.53:112,8,0	1/1:0,12:12:13.52:137,14,0	1/1:0,20:20:51.12:317,51,0	1/1:0,29:29:70.45:425,70,0	0/0:0,1:1:0.47:0,0,1	1/1:0,2:2:5.84:34,6,0	1/1:0,5:5:1.93:33,2,0	1/1:0,20:20:28.19:209,28,0	0/0:0,1:1:2.74:0,3,12	0/1:0,21:21:0.56:125,0,1	1/1:0,25:25:29.35:255,29,0	1/1:0,2:2:5.91:38,6,0	1/1:0,27:27:40.12:310,40,0	1/1:0,29:29:10.91:238,11,0	1/1:0,29:29:40.15:330,40,0	1/1:0,9:9:25.55:139,26,0
chr10	109291614	.	TC	T	12086.32	PASS	AC=50;AF=1.000;AN=50;BaseQRankSum=-6.787;DP=439;FS=18.404;HRun=3;HaplotypeScore=585.2458;InbreedingCoeff=-0.0221;MQ=33.61;MQ0=0;MQRankSum=0.268;QD=27.72;ReadPosRankSum=6.637;VQSLOD=-0.0986;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:9:15.05:186,15,0	1/1:1,10:11:26.74:288,27,0	./.	./.	1/1:5,19:24:35.90:414,36,0	1/1:1,24:24:59.36:773,59,0	1/1:0,6:6:15.05:185,15,0	1/1:4,23:27:57.18:705,57,0	1/1:2,13:15:32.81:436,33,0	1/1:2,26:28:56.44:818,56,0	1/1:1,27:28:67.56:806,68,0	1/1:2,16:18:21.70:460,22,0	1/1:3,13:15:15.66:273,16,0	1/1:1,13:14:28.41:390,28,0	1/1:0,23:23:69.21:843,69,0	1/1:2,26:28:57.83:798,58,0	1/1:0,3:3:1.22:67,1,0	1/1:0,2:2:6.02:74,6,0	1/1:0,5:5:15.05:184,15,0	1/1:1,17:18:47.71:584,48,0	./.	1/1:1,14:15:36.11:445,36,0	1/1:3,22:25:47.92:593,48,0	1/1:0,2:2:3.01:37,3,0	1/1:2,26:28:69.11:869,69,0	1/1:1,25:26:49.04:699,49,0	1/1:4,25:29:55.95:828,56,0	1/1:3,8:11:32.03:329,32,0
chr10	109293727	.	T	TGCCCAC	7760.56	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-9.111;DP=756;FS=0.438;HRun=0;HaplotypeScore=152.6298;InbreedingCoeff=0.9361;MQ=70.71;MQ0=0;MQRankSum=-13.987;QD=37.49;ReadPosRankSum=3.652;VQSLOD=4.5626;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:75.12:0,75,1321	0/0:14,0:14:12.04:0,12,252	0/0:13,0:13:11.19:0,11,269	0/0:16,0:16:12.04:0,12,231	0/0:15,0:15:30.10:0,30,625	0/0:20,0:20:51.08:0,51,955	0/0:33,0:33:60.14:0,60,1105	0/0:21,0:21:36.08:0,36,607	0/0:33,0:33:75.19:0,75,1385	0/0:26,0:26:66.10:0,66,1242	0/0:14,0:14:30.09:0,30,602	1/1:15,29:48:69.24:2289,69,0	1/1:9,23:35:58.14:1874,58,0	1/1:10,29:40:60.20:1891,60,0	1/1:8,14:26:30.10:997,30,0	0/0:20,0:20:48.12:0,48,904	0/0:40,0:40:99:0,105,2065	0/0:32,0:32:69.20:0,69,1390	0/0:20,0:20:36.10:0,36,659	0/0:13,0:13:30.06:0,30,491	0/0:110,0:110:99:0,258,4547	1/1:5,8:15:9.03:244,9,0	1/1:5,4:10:2.84:14,3,0	1/1:11,18:33:17.98:452,18,0	0/0:18,0:18:53.92:0,54,946	0/0:30,0:30:75.20:0,75,1342	0/0:17,0:16:42.11:0,42,813	0/0:11,0:11:21.02:0,21,328
chr10	109295859	.	GA	G	1742.91	PASS	AB=0.770;AC=20;AF=0.357;AN=56;BaseQRankSum=3.430;DP=658;FS=0.000;HRun=15;HaplotypeScore=75.5613;InbreedingCoeff=0.4112;MQ=64.75;MQ0=17;MQRankSum=0.302;QD=5.91;ReadPosRankSum=4.889;VQSLOD=2.6419;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:35:56.18:0,56,573	0/0:7,0:7:12:0,12,106	0/0:40,1:13:17.88:0,18,121	0/0:28,0:9:13.05:0,13,78	0/1:8,12:19:59.24:146,0,59	1/1:6,11:20:31.71:177,32,0	0/1:15,12:31:11.66:248,0,12	0/0:30,1:32:36.44:0,36,419	1/1:8,15:24:46.23:291,46,0	0/0:22,1:23:28.40:0,28,350	0/1:12,1:12:6.02:6,0,69	1/1:12,3:16:28.55:178,29,0	1/1:10,7:17:0.30:126,0,0	0/1:16,2:17:5.83:94,0,6	0/1:15,7:23:0.04:194,0,0	0/0:20,1:23:20.44:0,20,363	0/1:33,2:35:5.62:6,0,404	0/0:34,2:36:34.46:0,34,547	0/0:16,1:19:9.69:0,10,214	0/0:22,2:24:11.96:0,12,335	0/0:27,0:27:47.79:0,48,400	1/1:9,3:15:17.62:87,18,0	0/1:8,8:16:19.41:75,0,19	1/1:5,12:18:28.52:177,29,0	0/1:14,11:24:23.23:124,0,23	0/0:28,0:30:43.64:0,44,355	0/0:17,1:18:27.20:0,27,329	0/0:10,0:13:33.24:0,33,243
chr10	109305600	.	C	CAA	15116.60	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-16.950;DP=689;FS=3.313;HRun=3;HaplotypeScore=72.1535;InbreedingCoeff=0.9997;MQ=84.61;MQ0=0;MQRankSum=-0.820;QD=50.90;ReadPosRankSum=4.311;VQSLOD=4.3132;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.23:0,81,1186	0/0:8,0:8:24.08:0,24,367	0/0:24,0:24:63.18:0,63,866	0/0:19,0:19:48.16:0,48,711	1/1:0,38:38:99:2156,114,0	1/1:0,22:23:63.22:1217,63,0	1/1:0,22:22:60.21:1159,60,0	0/0:38,0:38:99:0,108,1596	1/1:0,28:28:66.23:1275,66,0	0/0:26,0:26:72.24:0,72,1085	0/0:24,0:24:66.21:0,66,984	1/1:0,25:26:69.24:1332,69,0	1/1:1,23:24:63.22:1216,63,0	1/1:0,19:19:54.19:1043,54,0	1/1:1,30:31:81.28:1564,81,0	0/0:28,0:28:81.26:0,81,1217	0/0:32,0:32:93.25:0,93,1355	0/0:26,0:26:69.20:0,69,1007	0/0:18,0:18:51.17:0,51,771	0/0:38,0:38:99:0,111,1653	0/0:19,0:19:57.19:0,57,871	1/1:2,24:27:69.24:1333,69,0	1/1:1,23:24:60.16:1120,60,0	1/1:0,15:16:39.13:753,39,0	1/1:1,18:19:51.13:947,51,0	0/0:29,0:29:87.28:0,87,1293	0/0:21,0:21:63.21:0,63,963	0/0:14,0:14:42.14:0,42,642
chr10	109307142	.	C	CT	2818.16	PASS	AB=0.885;AC=25;AF=0.446;AN=56;BaseQRankSum=-5.358;DP=460;FS=2.524;HRun=12;HaplotypeScore=45.5918;InbreedingCoeff=0.8719;MQ=69.34;MQ0=0;MQRankSum=0.578;QD=14.53;ReadPosRankSum=0.454;VQSLOD=4.0508;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:74.46:0,74,544	0/0:7,0:7:11.89:0,12,84	0/0:9,0:8:9.19:0,9,40	0/0:9,0:6:8.46:0,8,53	1/1:8,19:28:32.53:447,33,0	1/1:6,15:21:23.63:388,24,0	1/1:4,8:12:19.27:178,19,0	0/0:21,1:21:12.49:0,12,250	1/1:6,9:16:17.86:160,18,0	0/0:15,0:15:29.78:0,30,216	0/0:27,0:27:42.06:0,42,436	1/1:4,15:20:23.16:382,23,0	1/1:0,11:11:27.04:263,27,0	1/1:3,8:11:5.13:212,5,0	1/1:1,9:10:24.04:234,24,0	0/0:9,0:10:25.90:0,26,181	0/0:31,0:31:68.54:0,69,501	0/1:20,3:22:16.67:17,0,253	0/0:13,0:14:31.85:0,32,225	0/0:19,0:19:28.97:0,29,214	0/0:14,0:13:29.82:0,30,219	1/1:1,3:4:9.01:88,9,0	1/1:2,10:12:15.02:147,15,0	1/1:2,8:10:18.03:175,18,0	1/1:1,15:16:36.06:350,36,0	0/0:22,0:22:38.62:0,39,280	0/0:22,0:23:55.67:0,56,396	0/0:10,0:10:23.82:0,24,171
chr10	109307692	.	A	ACCC	3027.49	PASS	AB=0.984;AC=26;AF=0.464;AN=56;BaseQRankSum=4.136;DP=525;FS=4.404;HRun=9;HaplotypeScore=92.6012;InbreedingCoeff=0.8326;MQ=80.41;MQ0=2;MQRankSum=-7.341;QD=15.06;ReadPosRankSum=-4.078;VQSLOD=0.4448;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:95.95:0,96,1114	0/1:10,0:10:5.08:5,0,175	0/0:32,0:25:8.35:0,8,326	0/1:30,0:26:0.99:1,0,200	1/1:5,0:6:9.45:105,9,0	1/1:7,0:13:9.03:141,9,0	1/1:7,4:22:16.30:256,16,0	0/0:28,0:28:24.43:0,24,510	1/1:3,2:11:9.03:162,9,0	0/0:18,0:18:42.04:0,42,491	0/0:18,0:18:36.51:0,37,450	1/1:13,5:18:30.04:406,30,0	1/1:15,2:17:27.08:441,27,0	1/1:7,4:11:24.07:424,24,0	1/1:19,4:23:42.07:576,42,0	0/0:26,0:26:72.22:0,72,910	0/0:26,0:27:69.08:0,69,815	0/0:22,0:22:51.11:0,51,644	0/0:20,0:20:45.11:0,45,564	0/0:10,0:10:14.97:0,15,189	0/0:25,0:25:66.19:0,66,825	1/1:4,2:7:9.03:170,9,0	1/1:9,1:12:19.23:190,19,0	1/1:6,4:11:18.04:305,18,0	1/1:5,4:9:3.01:59,3,0	0/0:17,0:17:36.07:0,36,442	0/0:26,0:27:63.49:0,63,760	0/0:10,0:10:30.07:0,30,362
chr10	109307711	.	CT	C	1622.51	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.610;DP=486;FS=13.265;HRun=7;HaplotypeScore=64.5059;InbreedingCoeff=0.9876;MQ=79.61;MQ0=2;MQRankSum=-4.839;QD=18.65;ReadPosRankSum=-3.103;VQSLOD=1.6080;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,1:39:86.72:0,87,1342	0/0:8,0:8:24.08:0,24,302	0/0:30,0:23:43.54:0,44,566	0/0:25,0:22:35.19:0,35,360	0/0:8,0:8:15.52:0,16,189	0/0:11,0:11:26.80:0,27,276	0/0:17,0:17:27.05:0,27,321	0/0:16,0:16:42.12:0,42,509	0/0:9,0:9:21.01:0,21,232	0/0:16,0:16:39.12:0,39,482	0/0:15,0:15:30.03:0,30,346	1/1:3,12:15:32.92:310,33,0	1/1:0,15:15:39.01:375,39,0	1/1:0,13:13:30:293,30,0	1/1:1,13:14:39.05:387,39,0	0/0:30,0:30:87.20:0,87,1037	0/0:28,0:28:80.26:0,80,995	0/0:20,0:20:57.18:0,57,717	0/0:19,0:19:57.16:0,57,693	0/0:10,0:10:27.08:0,27,327	0/0:27,0:27:75.20:0,75,895	1/1:1,7:8:17.95:160,18,0	1/1:1,8:9:12.49:123,12,0	1/1:5,8:13:20.77:172,21,0	0/0:9,0:9:27.04:0,27,321	0/0:26,0:26:69.22:0,69,868	0/0:26,0:26:69.17:0,69,816	0/0:9,0:9:27.07:0,27,326
chr10	109309882	.	ACC	A	8208.85	PASS	AB=0.571;AC=25;AF=0.446;AN=56;BaseQRankSum=-9.156;DP=613;FS=1.052;HRun=10;HaplotypeScore=100.6149;InbreedingCoeff=0.9057;MQ=74.13;MQ0=2;MQRankSum=-0.273;QD=26.74;ReadPosRankSum=2.787;VQSLOD=4.9622;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:39:80.12:0,80,312	0/0:6,0:7:8.52:0,9,104	0/0:12,0:13:19.99:0,20,183	0/0:14,0:14:23.02:0,23,205	1/1:0,12:13:27.02:359,27,0	1/1:1,15:16:39.10:435,39,0	1/1:1,21:22:57.15:635,57,0	0/0:15,0:26:38.58:0,39,214	1/1:4,22:26:66.18:734,66,0	0/0:21,0:22:47.65:0,48,721	0/0:8,0:8:15.05:0,15,231	1/1:4,27:29:66.16:735,66,0	1/1:5,31:36:87.23:970,87,0	1/1:3,20:23:63.15:702,63,0	1/1:2,37:39:99:1104,99,0	0/0:27,0:30:76.72:0,77,1119	0/0:4,0:24:47.41:0,47,163	0/0:1,0:23:54.90:0,55,189	0/0:5,1:22:11.04:0,11,108	0/0:2,0:12:21.36:0,21,104	0/0:7,1:29:18.48:0,18,180	1/1:3,21:24:54.14:602,54,0	1/1:1,22:23:60.16:672,60,0	1/1:3,28:32:77.93:848,78,0	1/1:2,12:14:29.97:393,30,0	0/0:2,0:16:30.75:0,31,111	0/0:3,1:20:12.17:0,12,127	0/1:2,1:8:20.46:20,0,21
chr10	109309932	.	GGTGTGT	G	2924.26	PASS	AC=22;AF=0.423;AN=52;BaseQRankSum=5.704;DP=567;FS=0.000;HRun=0;HaplotypeScore=152.5615;InbreedingCoeff=0.8312;MQ=55.72;MQ0=13;MQRankSum=-7.900;QD=12.39;ReadPosRankSum=2.511;VQSLOD=2.8619;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:27.09:0,27,731	0/0:3,0:3:6.02:0,6,135	0/0:17,0:13:0:0,0,0	./.	1/1:13,2:16:6.02:103,6,0	1/1:9,2:13:7.79:125,8,0	1/1:16,5:21:15.05:297,15,0	0/0:21,0:20:6:0,6,80	1/1:12,1:21:27.56:396,28,0	0/0:16,0:16:21.07:0,21,646	0/0:10,0:10:12.04:0,12,277	1/1:17,6:22:18.95:366,19,0	1/1:19,5:25:21:338,21,0	1/1:13,2:16:9.03:163,9,0	1/1:25,9:36:32.85:643,33,0	0/0:23,0:27:36.12:0,36,916	0/0:21,0:24:44.26:0,44,973	0/0:19,0:24:10.34:0,10,150	0/0:16,0:15:6.02:0,6,73	0/0:11,0:11:3.01:0,3,43	0/0:44,0:46:17.28:0,17,900	./.	1/1:15,1:16:9.03:160,9,0	1/1:23,2:26:12.04:205,12,0	1/1:13,5:21:18.06:326,18,0	0/0:24,0:23:33.57:0,34,806	0/0:21,0:21:27.09:0,27,744	0/0:5,0:5:15.05:0,15,425
chr10	109310894	.	GACAC	G	4725.16	PASS	AB=0.707;AC=24;AF=0.429;AN=56;BaseQRankSum=9.823;DP=822;FS=1.275;HRun=0;HaplotypeScore=147.9487;InbreedingCoeff=0.6593;MQ=65.06;MQ0=11;MQRankSum=1.097;QD=12.95;ReadPosRankSum=3.276;VQSLOD=4.7224;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:61,2:64:20.97:0,21,2069	0/0:12,0:13:32.83:0,33,614	0/0:38,0:18:5.98:0,6,53	0/0:47,0:22:9.01:0,9,92	1/1:10,0:24:15.02:138,15,0	1/1:6,0:14:17.24:146,17,0	1/1:12,0:27:9.25:74,9,0	0/0:33,0:31:29.90:0,30,473	1/1:7,0:23:24.03:222,24,0	0/0:26,1:28:8.73:0,9,929	0/0:21,0:21:39.03:0,39,765	0/1:12,17:29:2.86:354,0,3	1/1:15,10:25:6.70:518,7,0	1/1:9,17:25:29.99:460,30,0	1/1:15,21:39:35.20:762,35,0	0/1:8,3:26:77.25:110,0,77	0/0:46,0:52:84.59:0,85,1967	0/0:26,0:28:56.80:0,57,1051	0/1:17,0:19:7.29:7,0,308	0/0:25,0:25:56.89:0,57,1063	0/0:44,0:49:67.92:0,68,1185	1/1:10,6:16:6:96,6,0	1/1:3,14:18:15.93:417,16,0	1/1:17,34:52:54.90:1150,55,0	0/1:14,0:24:6.16:270,0,6	0/0:21,0:26:62.05:0,62,1027	0/0:24,0:24:2.81:0,3,924	0/0:8,0:8:12.93:0,13,270
chr10	109312080	.	A	AAC	1147.32	PASS	AB=0.841;AC=16;AF=0.333;AN=48;BaseQRankSum=-2.646;DP=614;FS=10.918;HRun=0;HaplotypeScore=107.4978;InbreedingCoeff=0.1130;MQ=67.44;MQ0=15;MQRankSum=2.498;QD=4.40;ReadPosRankSum=-1.751;VQSLOD=1.9080;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,11:32:15.05:214,15,0	0/0:7,0:7:6.01:0,6,65	./.	./.	0/1:15,1:17:23.74:24,0,156	0/0:22,0:23:17.88:0,18,176	0/0:27,0:30:17.69:0,18,149	./.	0/1:15,0:18:18.25:18,0,177	0/0:28,0:29:10.98:0,11,100	0/0:10,0:14:23.69:0,24,200	0/0:14,0:22:5.63:0,6,109	0/0:10,0:12:8.52:0,9,42	0/0:6,0:11:8.52:0,9,42	0/0:15,0:23:8.52:0,9,42	0/1:17,0:16:17.59:18,0,226	0/1:11,10:23:46.07:160,0,46	0/1:14,7:22:14.41:199,0,14	1/1:12,4:16:9.37:105,9,0	1/1:15,5:20:2.54:44,3,0	1/1:52,1:50:26.21:321,26,0	0/0:13,0:22:2.84:0,3,14	0/0:7,0:12:11.36:0,11,56	./.	0/0:27,0:27:20.86:0,21,213	0/1:13,0:18:20.26:20,0,27	0/1:12,4:18:20.60:101,0,21	0/1:5,1:6:23.59:79,0,24
chr10	109313791	.	T	TGCTCCGATGCAC	43838.75	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-9.201;DP=735;FS=0.000;HRun=0;HaplotypeScore=276.4616;InbreedingCoeff=0.9953;MQ=76.20;MQ0=0;MQRankSum=-20.026;QD=106.66;ReadPosRankSum=-4.004;VQSLOD=3.6003;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,13:41:77.27:4238,77,0	0/0:11,0:11:33.11:0,33,1154	0/0:21,0:22:61.24:0,61,2015	0/0:21,0:21:54.04:0,54,1689	1/1:17,11:29:14.69:905,15,0	1/1:15,11:29:63.17:3404,63,0	1/1:25,8:36:75.21:3320,75,0	1/1:23,6:29:78.27:3963,78,0	1/1:16,10:27:75.21:3913,75,0	0/0:30,0:30:84.29:0,84,3052	0/0:18,0:18:51.18:0,51,1904	0/0:30,0:30:81.26:0,81,2845	0/0:18,0:18:48.16:0,48,1739	0/0:30,0:30:87.30:0,87,3147	0/0:35,0:35:99:0,102,3496	0/0:18,0:18:48.15:0,48,1718	1/1:10,7:20:42.10:2076,42,0	1/1:4,7:17:30.07:1677,30,0	1/1:16,2:20:54.13:2242,54,0	1/1:12,9:22:42.14:2246,42,0	1/1:18,14:36:43.59:2144,44,0	0/0:32,0:32:84.04:0,84,2946	0/0:23,0:23:66.21:0,66,2320	0/0:36,0:36:99:0,102,3649	1/1:12,13:26:60.16:3166,60,0	1/1:22,15:39:99:5856,108,0	1/1:17,11:34:66.23:3830,66,0	1/1:3,3:6:15.05:859,15,0
chr10	109317357	.	C	CTG	490.89	PASS	AB=0.985;AC=26;AF=0.500;AN=52;BaseQRankSum=3.217;DP=797;FS=0.711;HRun=0;HaplotypeScore=112.9480;InbreedingCoeff=0.2897;MQ=40.85;MQ0=107;MQRankSum=-4.004;QD=1.00;ReadPosRankSum=-0.440;VQSLOD=2.1790;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:25:2.98:22,3,0	0/0:11,0:12:26.12:0,26,272	./.	./.	1/1:11,1:9:3.01:45,3,0	0/1:30,1:24:79.49:79,0,83	1/1:43,4:32:8.97:93,9,0	1/1:46,0:19:2.67:18,3,0	0/1:29,2:29:91.43:91,0,126	0/0:35,0:27:51.13:0,51,592	0/0:13,0:12:15.03:0,15,168	0/0:40,0:36:10.28:0,10,58	0/1:38,0:32:2.36:2,0,27	0/0:39,0:34:13.32:0,13,55	0/0:40,0:33:9.65:0,10,43	0/0:33,0:34:72:0,72,846	1/1:17,1:13:1.25:3,1,0	1/1:17,0:12:5.04:12,5,0	0/1:23,0:14:0.75:61,0,1	0/0:21,0:16:2.29:0,2,12	0/1:103,0:79:24.42:24,0,104	0/0:26,0:21:2.67:0,3,11	1/1:19,0:12:3.01:44,3,0	0/0:45,0:42:13.39:0,13,55	1/1:16,5:16:6.02:96,6,0	0/1:33,0:26:35.79:36,0,89	1/1:12,0:9:1.03:11,1,0	1/1:7,1:7:2.50:9,2,0
chr10	109317373	.	GTGTC	G	963.41	PASS	AB=1.000;AC=31;AF=0.596;AN=52;BaseQRankSum=5.449;DP=743;FS=0.000;HRun=0;HaplotypeScore=130.6909;InbreedingCoeff=0.3012;MQ=40.55;MQ0=109;MQRankSum=-1.833;QD=1.84;ReadPosRankSum=-5.755;VQSLOD=0.1806;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:23:10.22:74,10,0	0/0:10,0:10:30.01:0,30,562	./.	./.	1/1:8,0:5:2.58:10,3,0	0/1:28,0:21:4.68:5,0,127	1/1:41,0:26:9.90:75,10,0	1/1:42,0:11:3.34:39,3,0	0/1:31,0:29:73.83:74,0,196	0/0:36,0:27:66.14:0,66,1138	0/0:12,0:12:20.99:0,21,306	1/1:29,3:28:5.14:126,5,0	1/1:40,1:36:1.63:7,2,0	0/0:36,1:32:3.22:0,3,6	0/0:32,2:27:2.32:0,2,4	0/0:42,0:38:89.78:0,90,1640	0/1:17,0:12:0.01:0,0,0	1/1:13,0:9:11.65:76,12,0	0/1:20,0:12:19.61:85,0,20	1/1:14,0:12:5.21:32,5,0	0/1:89,0:67:90.66:91,0,200	0/1:30,0:24:0.30:0,0,0	1/1:16,0:10:2.68:11,3,0	0/0:47,1:45:1.88:0,2,3	1/1:24,0:20:17.53:124,18,0	0/1:33,0:25:96.42:188,0,96	1/1:11,0:10:1.90:50,2,0	1/1:6,0:5:8.80:53,9,0
chr10	109317375	.	GTC	G	2384.06	PASS	AB=0.989;AC=36;AF=0.692;AN=52;BaseQRankSum=6.734;DP=712;FS=9.781;HRun=0;HaplotypeScore=109.8567;InbreedingCoeff=0.3777;MQ=40.40;MQ0=109;MQRankSum=-3.286;QD=4.06;ReadPosRankSum=-3.021;VQSLOD=1.1375;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:22:11.97:95,12,0	0/0:10,0:10:7.53:0,8,449	./.	./.	0/1:7,0:4:0:0,0,0	0/0:27,0:21:10.28:0,10,121	1/1:39,0:24:15.58:98,16,0	0/1:37,1:6:7.19:31,0,7	0/1:31,1:30:94.26:94,0,111	0/0:37,0:28:68.92:0,69,958	0/0:10,0:10:20.99:0,21,268	1/1:8,24:28:26.87:361,27,0	1/1:8,31:34:19.39:271,19,0	1/1:9,28:32:15.05:228,15,0	1/1:9,25:27:12.04:183,12,0	0/0:41,0:37:89.62:0,90,1371	1/1:7,10:12:2.48:9,2,0	1/1:11,0:8:17.72:120,18,0	0/1:20,0:10:23.10:120,0,23	1/1:12,0:11:11.35:80,11,0	0/1:83,1:63:99:111,0,132	1/1:10,19:23:2.85:46,3,0	1/1:7,7:9:2.22:7,2,0	1/1:6,40:43:15.05:228,15,0	1/1:22,1:19:2.30:87,2,0	0/1:31,0:23:71.30:258,0,71	1/1:10,0:9:10.86:77,11,0	1/1:5,0:4:8.78:52,9,0
chr10	109317419	.	GTC	G	1998.52	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.004;DP=619;FS=1.818;HRun=0;HaplotypeScore=116.0403;InbreedingCoeff=0.9333;MQ=59.72;MQ0=36;MQRankSum=0.481;QD=21.04;ReadPosRankSum=2.711;VQSLOD=4.2529;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:48.02:0,48,708	0/0:7,0:7:21.04:0,21,368	0/0:29,0:21:57.09:0,57,924	0/0:25,0:18:18.96:0,19,694	1/1:0,9:8:9.01:137,9,0	1/1:1,15:16:24.01:338,24,0	1/1:5,27:30:59.52:878,60,0	0/0:27,0:23:65.92:0,66,1065	1/1:11,14:23:47.47:585,47,0	0/0:27,0:26:78.10:0,78,1247	0/0:10,0:10:26.98:0,27,401	0/0:29,0:27:48.13:0,48,844	0/0:24,0:23:26.91:0,27,520	0/0:30,0:29:45.03:0,45,664	0/0:27,0:24:51.16:0,51,949	0/0:35,0:32:78.21:0,78,1386	0/0:11,0:10:18.06:0,18,339	0/0:14,0:13:35.99:0,36,503	0/0:27,0:21:62.99:0,63,936	0/0:11,0:11:27.09:0,27,516	0/0:59,0:52:69.13:0,69,1151	0/0:26,0:24:30.08:0,30,569	0/0:6,0:6:6.02:0,6,116	0/0:44,0:42:45.11:0,45,754	1/1:2,11:13:15.05:229,15,0	0/0:25,0:22:60.11:0,60,990	0/0:4,0:4:9.03:0,9,165	0/0:4,0:4:12.04:0,12,196
chr10	109322085	.	G	GA	23903.07	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-13.398;DP=755;FS=1.553;HRun=1;HaplotypeScore=63.9991;InbreedingCoeff=0.9965;MQ=80.73;MQ0=0;MQRankSum=-5.949;QD=38.93;ReadPosRankSum=2.965;VQSLOD=5.5615;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,40:42:93.31:1394,93,0	0/0:10,0:10:27.07:0,27,335	0/0:21,0:21:56.19:0,56,737	0/0:18,0:18:44.99:0,45,533	1/1:0,17:17:51.13:738,51,0	1/1:0,23:23:66.22:988,66,0	1/1:2,28:30:72.24:1079,72,0	1/1:1,34:35:99:1482,102,0	1/1:0,23:23:60.20:899,60,0	0/0:40,0:40:99:0,117,1519	0/0:17,0:17:48.15:0,48,616	1/1:2,31:33:87.29:1304,87,0	1/1:0,31:31:87.29:1302,87,0	1/1:0,29:29:78.26:1169,78,0	1/1:1,21:22:54.18:809,54,0	0/0:35,0:35:99:0,102,1310	1/1:0,40:40:96.33:1439,96,0	1/1:0,32:32:72.24:1079,72,0	1/1:1,17:18:51.17:756,51,0	1/1:0,17:17:48.16:719,48,0	1/1:4,59:63:99:2247,151,0	1/1:1,19:20:48.16:719,48,0	1/1:0,13:13:36.12:540,36,0	1/1:1,46:47:99:1932,129,0	1/1:0,22:22:63.21:944,63,0	1/1:1,19:20:57.18:836,57,0	1/1:0,31:31:87.29:1304,87,0	1/1:0,6:6:15.05:225,15,0
chr10	109324638	.	CA	C	860.92	PASS	AB=0.822;AC=25;AF=0.463;AN=54;BaseQRankSum=2.881;DP=467;FS=1.104;HRun=15;HaplotypeScore=61.2611;InbreedingCoeff=0.4418;MQ=53.75;MQ0=18;MQRankSum=4.211;QD=3.01;ReadPosRankSum=4.506;VQSLOD=-0.7185;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,2:26:14.31:14,0,246	0/0:6,0:5:6:0,6,53	./.	0/1:6,0:4:0.75:1,0,9	1/1:5,5:11:4.90:25,5,0	1/1:5,12:18:13.91:134,14,0	1/1:7,10:16:25.64:160,26,0	0/0:14,1:15:11.10:0,11,203	1/1:5,9:13:16.64:102,17,0	0/0:15,0:15:17.99:0,18,156	0/0:13,0:14:8.01:0,8,85	1/1:10,8:18:3.76:12,4,0	1/1:5,3:10:10.96:64,11,0	0/1:9,6:13:29.82:79,0,30	1/1:6,7:14:10.86:64,11,0	0/0:12,0:9:14.83:0,15,117	0/1:29,3:31:9.89:10,0,370	0/1:24,5:30:21.97:22,0,364	0/0:25,1:24:22.58:0,23,297	0/0:15,0:18:25.82:0,26,228	0/0:18,1:19:5.19:0,5,159	0/1:9,6:13:31.34:42,0,31	1/1:4,6:10:11.75:77,12,0	0/1:9,12:21:0.25:127,0,0	1/1:6,9:17:17.55:115,18,0	0/0:18,1:19:18.12:0,18,230	0/0:14,1:15:14.16:0,14,208	0/0:11,0:9:14.95:0,15,121
chr10	109324725	.	CGTGTGTGTGTGTGT	C	1580.75	PASS	AB=0.778;AC=17;AF=0.327;AN=52;BaseQRankSum=2.967;DP=470;FS=4.584;HRun=0;HaplotypeScore=163.3746;InbreedingCoeff=0.5831;MQ=69.80;MQ0=23;MQRankSum=-5.419;QD=10.54;ReadPosRankSum=-2.248;VQSLOD=2.2815;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,3:24:3.95:42,4,0	0/0:9,0:9:6.02:0,6,318	./.	0/0:30,0:21:3.90:0,4,43	0/0:11,0:10:2.82:0,3,86	0/0:14,0:12:15.05:0,15,586	0/0:20,0:18:12.51:0,13,332	./.	0/0:18,0:18:33.49:0,33,758	0/0:21,0:20:30.97:0,31,881	0/0:8,0:8:3.01:0,3,194	0/0:23,0:22:27.09:0,27,1017	0/0:14,0:13:21.07:0,21,618	0/0:10,0:9:6.02:0,6,151	0/0:16,0:16:17.88:0,18,568	0/0:16,0:14:11.63:0,12,414	1/1:14,0:14:12.04:319,12,0	1/1:19,0:19:8.99:254,9,0	1/1:19,0:17:5.55:149,6,0	1/1:8,2:9:3.89:53,4,0	1/1:22,0:21:2.60:5,3,0	0/0:14,0:14:21.04:0,21,663	0/0:4,0:8:3.95:0,4,127	0/0:7,0:21:5.74:0,6,97	0/0:14,0:13:16.57:0,17,676	0/1:10,3:14:99:457,0,107	1/1:8,8:16:9.03:345,9,0	1/1:5,4:8:3.01:116,3,0
chr10	109324767	.	TGTGAGAGAGAGAGAGA	T	414.10	PASS	AB=1.000;AC=22;AF=0.423;AN=52;BaseQRankSum=-1.095;DP=366;FS=43.483;HRun=0;HaplotypeScore=144.3578;InbreedingCoeff=0.2430;MQ=39.67;MQ0=29;MQRankSum=5.437;QD=2.11;ReadPosRankSum=-2.971;VQSLOD=-0.0167;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:3.45:0,3,158	0/0:11,0:11:18.05:0,18,764	./.	./.	1/1:4,8:11:2.97:20,3,0	1/1:13,0:10:8.76:57,9,0	1/1:21,0:19:11.59:88,12,0	0/0:14,0:12:20.98:0,21,429	1/1:17,0:15:6.86:120,7,0	0/0:21,0:21:47.92:0,48,1505	0/0:5,0:4:9.03:0,9,456	0/1:14,0:12:83.05:83,0,216	0/1:15,0:13:41.26:41,0,632	0/1:8,0:6:11.61:12,0,277	0/1:11,0:9:20.50:21,0,367	0/0:19,0:16:15.42:0,15,525	0/0:13,0:11:3.40:0,3,672	0/0:14,0:12:31.29:0,31,893	0/0:6,0:4:10.53:0,11,150	1/1:5,0:4:0.89:2,1,0	0/0:19,0:15:6.63:0,7,358	0/1:8,0:6:18.43:18,0,95	0/1:11,0:10:0.13:0,0,0	1/1:17,0:16:2.94:18,3,0	1/1:20,0:18:9.99:80,10,0	0/0:16,0:16:29.84:0,30,1360	0/1:16,0:15:8.82:9,0,435	0/1:8,0:6:5.80:6,0,147
chr10	109327041	.	G	GA	6687.20	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-13.953;DP=668;FS=6.723;HRun=9;HaplotypeScore=71.2427;InbreedingCoeff=0.9830;MQ=57.15;MQ0=5;MQRankSum=-0.265;QD=23.71;ReadPosRankSum=0.731;VQSLOD=5.6908;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,42:46:99:1250,107,0	0/0:6,0:6:14.99:0,15,130	0/0:18,0:6:14.99:0,15,129	0/0:10,0:5:8.99:0,9,78	0/0:27,0:27:74.97:0,75,646	0/0:18,0:18:44.94:0,45,382	0/0:23,0:23:62.91:0,63,539	1/1:9,29:38:75.19:818,75,0	0/0:20,0:20:53.97:0,54,468	0/0:30,0:30:74.97:0,75,651	0/0:26,0:26:68.97:0,69,595	0/0:28,0:28:35.79:0,36,539	0/0:20,0:20:59.99:0,60,521	0/0:20,0:20:50.98:0,51,442	0/0:31,0:31:71.94:0,72,621	0/0:17,0:17:41.99:0,42,365	1/1:5,32:37:64.19:932,64,0	1/1:3,35:38:92.06:1001,92,0	1/1:7,14:20:18.68:394,19,0	1/1:4,14:18:33.09:365,33,0	1/1:2,15:17:16.06:405,16,0	0/0:22,0:22:59.98:0,60,519	0/0:23,0:23:59.98:0,60,520	0/0:21,0:21:47.99:0,48,417	0/0:26,0:26:59.41:0,59,499	1/1:3,20:23:60.16:663,60,0	1/1:4,25:29:23.18:560,23,0	1/1:1,14:15:27.07:299,27,0
chr10	109328096	.	CTGTGTGTGTG	C	525.13	PASS	AC=12;AF=0.250;AN=48;BaseQRankSum=3.198;DP=632;FS=8.881;HRun=0;HaplotypeScore=171.4219;InbreedingCoeff=0.5798;MQ=71.04;MQ0=14;MQRankSum=-4.068;QD=4.23;ReadPosRankSum=-0.396;VQSLOD=1.7440;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:24.08:0,24,448	./.	./.	0/0:44,0:36:1.77:0,2,4	0/0:10,0:11:2.95:0,3,90	0/0:17,0:17:9.03:0,9,165	0/0:24,0:24:12.04:0,12,279	./.	0/0:19,0:20:18.53:0,19,460	0/0:23,0:22:24.33:0,24,713	0/0:12,0:12:3.01:0,3,87	1/1:13,0:15:3.01:70,3,0	1/1:14,4:18:5.42:237,5,0	1/1:12,2:14:3.01:88,3,0	1/1:24,1:25:3:88,3,0	0/0:19,0:20:12.04:0,12,417	0/0:25,0:26:39.60:0,40,720	0/0:14,0:15:14.64:0,15,273	0/0:30,0:30:15.04:0,15,252	0/0:8,0:9:6.02:0,6,135	0/0:62,0:59:33.11:0,33,672	./.	1/1:15,3:18:3.01:87,3,0	1/1:26,7:33:2.71:88,3,0	0/0:12,0:12:6.02:0,6,183	0/0:23,0:23:7.58:0,8,198	0/0:23,0:27:21.05:0,21,381	0/0:18,0:17:9.03:0,9,197
chr10	109331578	.	C	CA	4749.47	PASS	AB=0.909;AC=22;AF=0.393;AN=56;BaseQRankSum=-9.346;DP=555;FS=5.313;HRun=9;HaplotypeScore=80.5832;InbreedingCoeff=0.8134;MQ=57.52;MQ0=7;MQRankSum=-0.594;QD=18.41;ReadPosRankSum=-0.864;VQSLOD=4.6648;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,23:27:49.92:591,50,0	0/0:11,0:10:20.95:0,21,175	0/0:9,0:4:4.39:0,4,45	0/1:11,0:6:15.63:29,0,16	0/0:26,0:26:52.29:0,52,422	0/0:12,0:12:29.97:0,30,257	0/0:26,0:25:47.92:0,48,411	1/1:11,14:25:21.71:400,22,0	0/1:7,2:9:12.15:12,0,135	0/0:14,0:13:27.87:0,28,236	0/0:21,0:21:53.66:0,54,453	0/0:21,0:21:35.98:0,36,312	0/0:16,0:16:23.90:0,24,208	0/0:26,0:26:50.91:0,51,437	0/0:25,0:25:41.47:0,41,364	0/0:19,0:19:47.98:0,48,417	1/1:6,24:31:65.20:757,65,0	1/1:6,24:32:29.34:578,29,0	1/1:9,14:21:42.06:436,42,0	1/1:5,21:26:48.49:492,48,0	1/1:4,8:12:17.88:180,18,0	0/0:20,0:21:34.72:0,35,291	0/0:15,0:14:28.97:0,29,233	0/0:18,0:18:44.99:0,45,390	0/0:15,1:16:5.80:0,6,279	1/1:7,15:21:14.20:432,14,0	1/1:1,19:20:39.11:432,39,0	1/1:2,14:17:13.93:410,14,0
chr10	109331594	.	C	CA	2717.41	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-7.127;DP=588;FS=4.425;HRun=10;HaplotypeScore=76.7985;InbreedingCoeff=0.8700;MQ=62.91;MQ0=3;MQRankSum=-0.136;QD=17.76;ReadPosRankSum=1.404;VQSLOD=4.5287;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:89.05:0,89,737	0/0:10,0:10:29.96:0,30,246	0/0:16,0:10:20.97:0,21,175	0/1:16,0:11:5.04:5,0,74	0/0:27,1:27:64.95:0,65,523	0/0:11,0:11:29.97:0,30,246	0/0:22,0:22:65.89:0,66,535	0/0:33,0:33:57.56:0,58,638	0/0:8,0:8:20.97:0,21,172	0/0:15,1:17:5.99:0,6,245	0/0:24,0:24:41.86:0,42,345	1/1:3,18:21:32.96:352,33,0	1/1:1,16:17:36.09:383,36,0	1/1:3,22:26:63.02:652,63,0	1/1:3,19:23:41.94:430,42,0	0/0:17,0:17:47.73:0,48,383	0/0:29,0:28:64.47:0,64,521	0/0:32,0:32:59.90:0,60,491	0/0:28,1:28:16.62:0,17,423	0/0:26,0:26:53.61:0,54,441	0/0:10,0:10:20.97:0,21,172	1/1:4,18:22:39.10:413,39,0	1/1:4,9:13:2.23:256,2,0	1/1:1,14:15:20.46:417,20,0	0/0:15,0:15:38.93:0,39,320	0/0:26,0:25:47.86:0,48,390	0/0:27,1:30:24.96:0,25,413	0/0:15,0:15:20.85:0,21,172
chr10	109334771	.	TGCGCGCGC	T	656.06	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=3.264;DP=378;FS=1.153;HRun=0;HaplotypeScore=102.4682;InbreedingCoeff=0.7579;MQ=71.70;MQ0=2;MQRankSum=-2.818;QD=8.87;ReadPosRankSum=-1.639;VQSLOD=1.6339;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:39.12:0,39,1067	0/0:10,0:10:15.05:0,15,449	./.	0/0:15,0:11:0.66:0,1,27	1/1:13,3:16:6.49:135,6,0	1/1:14,0:14:9.03:168,9,0	1/1:25,0:25:3.01:67,3,0	0/0:13,0:13:7.60:0,8,181	1/1:7,0:7:6.02:132,6,0	0/0:17,0:17:39.13:0,39,1048	0/0:7,0:7:21.07:0,21,496	0/0:15,0:15:30.10:0,30,842	0/0:5,0:5:6.02:0,6,176	0/0:12,0:12:18.03:0,18,343	0/0:7,0:7:9.03:0,9,180	0/0:4,0:4:12.04:0,12,454	0/0:32,0:32:69.22:0,69,1783	0/0:19,0:19:36.12:0,36,918	0/0:23,0:23:42.03:0,42,850	0/0:7,0:7:18.05:0,18,312	0/0:14,0:14:27.09:0,27,689	0/0:10,0:9:18.06:0,18,508	0/0:9,0:9:15.05:0,15,406	0/0:19,0:19:30.50:0,31,697	1/1:10,2:12:11.84:298,12,0	0/0:19,0:19:41.47:0,41,1182	0/0:10,0:10:19.36:0,19,269	0/0:10,0:10:21.07:0,21,595
chr10	109334784	.	GCGCGCGCGCACACACACACA	G	1539.67	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=2.674;DP=366;FS=0.000;HRun=0;HaplotypeScore=171.8514;InbreedingCoeff=0.8172;MQ=59.20;MQ0=4;MQRankSum=-3.530;QD=22.98;ReadPosRankSum=1.393;VQSLOD=2.5966;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:45.14:0,45,2112	0/0:7,0:7:18.06:0,18,1037	./.	0/0:9,0:5:3.48:0,3,31	1/1:5,1:16:6.49:323,6,0	1/1:0,14:14:9.03:480,9,0	1/1:5,19:23:3.01:171,3,0	0/0:11,0:11:26.51:0,27,497	1/1:1,6:7:5.97:330,6,0	0/0:15,0:15:45.15:0,45,2097	0/0:12,0:12:33.11:0,33,1675	0/0:14,0:14:30.10:0,30,1358	0/0:5,0:5:12.04:0,12,549	0/0:12,0:12:18.03:0,18,584	0/0:6,0:6:9.03:0,9,471	0/0:6,0:6:18.06:0,18,1282	0/0:36,0:36:92.07:0,92,4396	0/0:18,0:18:49.72:0,50,2386	0/0:17,0:16:45.04:0,45,1482	0/0:9,0:8:21.06:0,21,933	0/0:13,0:13:33.11:0,33,1284	0/0:13,0:12:21.07:0,21,807	0/0:12,0:12:27.98:0,28,1313	0/0:22,0:22:29.72:0,30,1068	1/1:5,0:6:11.62:382,12,0	0/0:19,0:19:48.04:0,48,2138	0/0:12,0:12:34.76:0,35,1515	0/0:8,0:8:21.07:0,21,1063
chr10	109334792	.	GCACA	G	2505.01	PASS	AB=1.000;AC=41;AF=0.820;AN=50;BaseQRankSum=5.491;DP=373;FS=41.906;HRun=0;HaplotypeScore=81.1441;InbreedingCoeff=0.4684;MQ=55.26;MQ0=6;MQRankSum=0.712;QD=8.08;ReadPosRankSum=1.650;VQSLOD=0.6989;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:24:18.04:232,18,0	0/0:8,0:8:8.24:0,8,143	./.	./.	1/1:16,0:16:6.01:56,6,0	1/1:14,0:14:9.01:81,9,0	1/1:21,0:20:3:28,3,0	0/0:15,0:14:5.23:0,5,23	1/1:7,0:7:5.82:52,6,0	0/1:17,0:17:21.94:22,0,182	0/0:11,0:11:11.63:0,12,209	./.	1/1:7,0:8:15.05:210,15,0	1/1:3,1:8:3.01:47,3,0	1/1:2,6:8:6.02:94,6,0	0/0:6,0:6:15.05:0,15,306	1/1:33,2:36:38.88:518,39,0	1/1:17,2:19:17.10:256,17,0	1/1:11,1:11:6.02:92,6,0	1/1:8,0:7:3.01:45,3,0	1/1:18,0:18:9.03:133,9,0	1/1:8,5:12:3.01:41,3,0	1/1:12,0:12:14.79:176,15,0	1/1:10,9:19:3.01:47,3,0	1/1:6,0:6:3:28,3,0	1/1:19,0:19:8.62:118,9,0	1/1:12,1:14:16.92:237,17,0	1/1:7,2:9:9.03:138,9,0
chr10	109334861	.	GA	G	4380.23	PASS	AB=0.931;AC=22;AF=0.393;AN=56;BaseQRankSum=7.222;DP=462;FS=3.982;HRun=10;HaplotypeScore=88.5021;InbreedingCoeff=0.7949;MQ=68.13;MQ0=0;MQRankSum=-1.095;QD=18.33;ReadPosRankSum=2.419;VQSLOD=5.5506;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:68.72:584,69,0	0/0:7,0:7:21.06:0,21,232	0/0:12,1:12:1.01:0,1,220	0/1:12,1:13:48.89:49,0,120	0/0:19,0:19:48.11:0,48,516	0/0:20,0:20:39.05:0,39,409	0/0:22,1:22:28.01:0,28,511	1/1:3,17:20:47.92:409,48,0	0/0:12,0:12:27.07:0,27,299	0/0:19,0:19:39.11:0,39,430	0/0:13,0:13:33.01:0,33,342	0/0:10,0:10:27.07:0,27,299	0/0:13,0:13:33.05:0,33,352	0/0:12,0:12:27.07:0,27,299	0/0:9,0:9:15.04:0,15,166	0/0:9,0:10:29.91:0,30,305	1/1:3,25:28:41.80:592,42,0	1/1:2,34:36:68.47:750,68,0	1/1:6,14:20:41.98:364,42,0	1/1:2,9:12:29.83:238,30,0	1/1:1,19:20:53.99:468,54,0	0/1:12,1:14:16.23:16,0,236	0/0:11,0:13:28.95:0,29,325	0/0:15,0:15:27.07:0,27,299	0/0:13,2:15:4.03:0,4,273	1/1:4,18:22:50.96:442,51,0	1/1:5,15:20:35.89:312,36,0	1/1:0,6:6:18:156,18,0
chr10	109336614	.	A	AG	64.69	PASS	AC=6;AF=0.60;AN=10;BaseQRankSum=0.198;DP=28;FS=0.000;HRun=0;HaplotypeScore=11.6403;MQ=26.73;MQ0=6;MQRankSum=0.922;QD=5.88;ReadPosRankSum=0.922;VQSLOD=2.7680;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,1:1:3.01:37,3,0	./.	./.	./.	./.	./.	0/0:1,0:1:0.89:0,1,2	./.	./.	./.	./.	0/0:2,0:1:1.82:0,2,5	./.	1/1:0,5:3:8.94:65,9,0	./.	./.	1/1:1,3:3:3.01:33,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	109336844	.	A	AG	396.11	PASS	AB=0.833;AC=15;AF=0.268;AN=56;BaseQRankSum=-1.413;DP=206;FS=4.785;HRun=9;HaplotypeScore=29.3737;InbreedingCoeff=0.5393;MQ=80.89;MQ0=4;MQRankSum=1.161;QD=7.34;ReadPosRankSum=-0.616;VQSLOD=-0.1747;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:26.99:0,27,234	0/0:4,0:3:9:0,9,78	0/1:18,0:9:4.60:5,0,73	0/0:24,0:13:25.87:0,26,183	0/0:8,0:8:17.98:0,18,153	0/0:3,0:3:5.99:0,6,52	0/1:8,1:9:9.68:10,0,158	0/0:13,0:13:8.31:0,8,212	0/0:8,0:8:17.99:0,18,156	0/0:3,0:3:5.99:0,6,52	0/0:9,0:9:23.98:0,24,206	1/1:1,4:5:15.03:158,15,0	1/1:3,2:4:6.02:65,6,0	0/1:1,2:3:17.03:57,0,17	1/1:1,7:8:12.03:133,12,0	0/0:7,0:8:23.03:0,23,188	0/0:6,0:6:18:0,18,156	0/0:7,0:7:15:0,15,130	0/0:8,0:7:15:0,15,130	0/0:3,0:2:6:0,6,52	0/0:10,0:10:29.98:0,30,256	1/1:1,1:2:3.01:33,3,0	1/1:1,1:2:3.01:33,3,0	1/1:0,2:2:6.02:66,6,0	0/0:8,0:7:18:0,18,155	0/0:4,0:4:9:0,9,78	0/0:12,0:12:32.98:0,33,286	0/0:4,0:4:8.49:0,8,61
chr10	109337492	.	AT	A	2195.19	PASS	AB=0.898;AC=16;AF=0.286;AN=56;BaseQRankSum=10.425;DP=592;FS=0.000;HRun=11;HaplotypeScore=62.1977;InbreedingCoeff=0.8155;MQ=66.80;MQ0=2;MQRankSum=1.382;QD=12.91;ReadPosRankSum=3.314;VQSLOD=3.6234;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:37:96.20:0,96,1004	0/0:13,0:14:11.26:0,11,299	0/0:13,0:12:17.98:0,18,172	0/1:12,1:8:9.68:10,0,99	0/0:31,0:31:78.15:0,78,807	0/0:19,0:19:45.11:0,45,480	0/0:16,0:16:39.10:0,39,416	0/0:36,0:36:78.09:0,78,796	0/0:11,0:10:21.05:0,21,224	0/0:26,0:26:57.14:0,57,605	0/0:20,0:20:51.10:0,51,534	1/1:4,16:19:12.96:313,13,0	1/1:2,15:18:18:343,18,0	1/1:1,6:7:14.98:123,15,0	1/1:2,17:19:44.94:369,45,0	0/0:15,1:19:23.31:0,23,437	0/1:21,4:26:29.60:30,0,511	0/0:33,1:34:68.56:0,69,918	0/0:18,1:19:23.29:0,23,429	0/0:24,0:24:57.13:0,57,600	0/0:21,0:21:48.08:0,48,499	1/1:3,18:21:44.94:369,45,0	1/1:0,21:21:50.94:418,51,0	1/1:3,22:25:50.93:419,51,0	0/0:16,1:17:26.44:0,26,469	0/0:21,0:21:57.14:0,57,608	0/0:28,0:28:75.01:0,75,773	0/0:14,0:14:36.09:0,36,384
chr10	109339172	.	TA	T	2096.34	PASS	AB=0.723;AC=29;AF=0.518;AN=56;BaseQRankSum=-1.699;DP=487;FS=0.469;HRun=15;HaplotypeScore=61.8045;InbreedingCoeff=0.3465;MQ=75.41;MQ0=4;MQRankSum=2.587;QD=6.55;ReadPosRankSum=4.066;VQSLOD=2.5603;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,14:34:12.99:155,0,13	0/1:1,1:2:13.26:13,0,20	0/0:28,0:16:9.76:0,10,59	0/0:23,0:13:14.52:0,15,99	1/1:2,5:7:14.75:96,15,0	1/1:11,12:23:43.08:258,43,0	0/1:4,6:10:11.53:62,0,12	1/1:13,10:25:25.35:153,25,0	1/1:3,12:15:23.59:154,24,0	0/1:15,2:17:8.87:9,0,197	0/0:22,1:23:16.63:0,17,256	0/0:21,2:23:3.27:0,3,250	0/1:17,2:19:39.29:39,0,71	0/1:13,0:14:1.43:1,0,99	0/0:12,0:13:14.79:0,15,108	0/0:18,2:20:22.07:0,22,285	0/1:10,24:36:18.76:259,0,19	1/1:3,11:14:13.92:190,14,0	1/1:13,4:20:7.39:135,7,0	0/1:4,10:14:0.03:120,0,0	1/1:4,3:7:5.89:38,6,0	0/0:2,0:2:6:0,6,53	0/0:10,0:10:11.80:0,12,86	0/0:24,1:25:9.67:0,10,299	1/1:0,9:9:11.82:77,12,0	1/1:3,15:19:42.71:255,43,0	0/1:9,12:22:13.88:144,0,14	1/1:1,8:11:21.80:127,22,0
chr10	109339203	.	G	GA	1409.28	PASS	AB=0.804;AC=14;AF=0.250;AN=56;BaseQRankSum=-2.342;DP=573;FS=4.850;HRun=10;HaplotypeScore=71.7903;InbreedingCoeff=0.7747;MQ=63.37;MQ0=7;MQRankSum=-0.080;QD=12.25;ReadPosRankSum=0.703;VQSLOD=3.4552;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,1:39:39.69:0,40,525	0/0:6,0:6:17.49:0,17,120	0/0:25,0:8:19.45:0,19,127	0/0:33,0:14:23.49:0,23,142	0/1:14,3:17:28.45:28,0,226	0/0:24,0:25:55.91:0,56,449	0/0:15,0:15:37.99:0,38,301	0/0:32,0:33:73.89:0,74,591	0/0:25,0:25:53.91:0,54,443	0/0:22,0:22:40.68:0,41,365	0/0:23,0:23:50.91:0,51,417	0/1:15,7:22:3.75:314,0,4	1/1:5,16:21:14.45:356,14,0	1/1:2,14:16:27.07:288,27,0	1/1:3,8:11:6.02:64,6,0	0/0:20,0:20:34.54:0,35,416	0/0:36,1:36:33.31:0,33,468	0/0:27,0:29:60.93:0,61,475	0/0:18,0:19:40.96:0,41,324	0/0:14,0:14:23.89:0,24,196	0/0:8,0:8:11.98:0,12,99	1/1:1,6:7:9.02:96,9,0	1/1:1,3:4:6.01:63,6,0	1/1:8,9:17:38.66:380,39,0	0/0:19,0:19:38.67:0,39,307	0/0:23,0:23:46.96:0,47,392	0/0:23,0:24:43.95:0,44,350	0/0:17,0:17:47.92:0,48,391
chr10	109339878	.	TGC	T	1472.42	PASS	AC=36;AF=0.947;AN=38;BaseQRankSum=2.352;DP=110;FS=37.033;HRun=0;HaplotypeScore=120.2574;InbreedingCoeff=0.5444;MQ=60.97;MQ0=0;MQRankSum=-2.425;QD=14.30;ReadPosRankSum=1.865;VQSLOD=1.7840;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:36.69:179,37,0	./.	0/0:6,0:4:6.02:0,6,80	./.	./.	1/1:0,6:6:17.35:94,17,0	1/1:0,13:13:34.35:187,34,0	1/1:0,5:5:14.88:107,15,0	1/1:0,9:9:26.03:144,26,0	./.	./.	1/1:0,6:6:17.14:88,17,0	1/1:0,4:4:11.39:58,11,0	1/1:0,6:6:17.04:86,17,0	1/1:0,4:4:11.46:59,11,0	1/1:0,5:5:14.40:77,14,0	1/1:0,4:4:11.16:53,11,0	1/1:0,3:3:7.95:37,8,0	1/1:0,4:4:10.75:69,11,0	./.	1/1:0,4:4:11.67:82,12,0	1/1:0,1:1:2.04:6,2,0	./.	1/1:0,7:7:14.23:87,14,0	./.	1/1:0,5:5:14.79:96,15,0	1/1:0,3:3:8.83:56,9,0	./.
chr10	109339882	.	A	ATT	2741.02	PASS	AC=36;AF=0.947;AN=38;BaseQRankSum=3.149;DP=108;FS=46.455;HRun=0;HaplotypeScore=119.8721;InbreedingCoeff=0.6009;MQ=56.45;MQ0=0;MQRankSum=-3.388;QD=26.61;ReadPosRankSum=3.013;VQSLOD=2.3866;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:38.97:331,39,0	./.	0/0:5,0:4:9.44:0,9,72	./.	./.	1/1:0,6:6:18.01:165,18,0	1/1:0,13:13:36.01:342,36,0	1/1:0,5:5:15.04:166,15,0	1/1:0,9:9:27.02:250,27,0	./.	./.	1/1:0,6:6:18:158,18,0	1/1:0,4:4:12:105,12,0	1/1:0,6:6:17.99:156,18,0	1/1:0,4:4:12:106,12,0	1/1:0,5:5:15.01:136,15,0	1/1:0,4:4:11.95:96,12,0	1/1:0,3:3:9.03:139,9,0	1/1:0,4:4:10.27:103,10,0	./.	1/1:0,4:4:12.02:156,12,0	1/1:0,1:1:2.37:8,2,0	./.	1/1:0,7:7:14.97:173,15,0	./.	1/1:0,5:5:15.03:156,15,0	1/1:0,3:3:9.02:91,9,0	./.
chr10	109339900	.	G	GT	1441.01	PASS	AB=0.671;AC=32;AF=0.615;AN=52;BaseQRankSum=3.298;DP=216;FS=129.847;HRun=2;HaplotypeScore=124.7060;InbreedingCoeff=-0.0291;MQ=80.59;MQ0=0;MQRankSum=-3.851;QD=7.87;ReadPosRankSum=2.560;VQSLOD=0.2780;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,16:23:9.30:210,9,0	1/1:2,0:2:2.94:20,3,0	0/0:15,0:15:18.68:0,19,213	0/0:5,0:5:9.41:0,9,65	./.	1/1:1,5:6:14.66:87,15,0	0/1:9,8:17:41.76:109,0,42	0/1:8,10:18:68.95:198,0,69	0/1:3,6:9:16.27:85,0,16	0/0:2,0:2:3.01:0,3,37	0/0:2,0:2:3.01:0,3,36	0/1:4,4:8:18.80:67,0,19	1/1:1,7:8:20.48:119,20,0	1/1:4,3:7:11.65:67,12,0	0/1:4,4:8:17.41:66,0,17	1/1:1,5:6:17.57:104,18,0	0/1:7,4:11:30.55:31,0,34	0/1:2,5:7:52.66:61,0,53	0/1:6,4:10:21.39:62,0,21	0/0:6,0:6:3.01:0,3,35	0/1:8,6:14:71.35:71,0,116	1/1:1,0:1:2.37:8,2,0	1/1:2,0:2:2.80:13,3,0	1/1:3,4:7:8.59:44,9,0	./.	0/1:8,5:13:40.38:103,0,40	1/1:1,2:3:8.56:48,9,0	1/1:2,0:2:3:27,3,0
chr10	109339904	.	GT	G	1841.82	PASS	AB=0.688;AC=36;AF=0.692;AN=52;BaseQRankSum=1.604;DP=205;FS=115.501;HRun=2;HaplotypeScore=100.4466;InbreedingCoeff=-0.3606;MQ=91.58;MQ0=0;MQRankSum=-2.313;QD=9.16;ReadPosRankSum=0.162;VQSLOD=0.1446;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,16:22:18.32:242,18,0	1/1:2,0:2:2.87:16,3,0	0/1:11,7:18:99:174,0,149	0/1:6,1:7:34.23:59,0,34	1/1:3,1:4:3.01:38,3,0	1/1:0,5:5:14.08:66,14,0	0/1:4,8:12:29.63:63,0,30	0/1:4,12:16:40.57:223,0,41	0/1:2,6:8:7.74:60,0,8	0/1:1,1:2:32.12:32,0,36	0/0:3,0:3:3:0,3,29	0/1:2,4:6:11.67:47,0,12	1/1:1,7:8:19.60:90,20,0	1/1:1,3:4:11.49:73,11,0	0/1:2,4:6:10.64:46,0,11	1/1:1,5:6:16.85:78,17,0	0/1:7,4:11:22.73:112,0,23	0/1:2,5:7:30.86:79,0,31	0/1:6,4:10:13.45:46,0,13	0/1:6,0:6:20.60:32,0,21	0/1:9,6:15:72.94:101,0,73	./.	1/1:2,0:2:3.01:32,3,0	1/1:0,6:6:13.97:108,14,0	./.	0/1:6,5:11:40.47:79,0,40	1/1:2,2:4:7.89:35,8,0	1/1:3,0:3:6:60,6,0
chr10	109343080	.	GAGCCGGCA	G	13529.77	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=11.127;DP=605;FS=5.285;HRun=0;HaplotypeScore=192.5082;InbreedingCoeff=0.9905;MQ=79.37;MQ0=0;MQRankSum=-15.432;QD=67.65;ReadPosRankSum=1.081;VQSLOD=4.6091;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,26:32:75.26:2063,75,0	0/0:9,0:9:27.09:0,27,1129	0/0:20,0:20:51.02:0,51,1595	0/0:20,0:19:50.76:0,51,1821	0/0:20,0:20:54.11:0,54,2103	0/0:25,0:25:69.24:0,69,3001	0/0:40,0:40:99:0,114,4493	1/1:6,25:32:78.25:2066,78,0	0/0:24,0:24:69.24:0,69,3043	0/0:16,0:16:48.16:0,48,2101	0/0:4,0:4:12.04:0,12,543	0/0:22,0:22:57.20:0,57,2576	0/0:20,0:20:53.66:0,54,2319	0/0:35,0:35:90.31:0,90,4068	0/0:29,0:29:87.26:0,87,3581	0/0:30,0:30:90.28:0,90,3853	1/1:4,16:20:42.14:1214,42,0	1/1:2,14:16:42.10:1138,42,0	1/1:4,9:13:30.10:876,30,0	1/1:2,11:13:36.12:1023,36,0	1/1:4,7:11:12.04:351,12,0	0/0:21,0:21:60.12:0,60,2344	0/0:20,0:20:57.20:0,57,2498	0/0:20,0:20:45.15:0,45,1856	0/0:30,0:30:84.29:0,84,3775	1/1:4,20:24:63.21:1752,63,0	1/1:2,25:27:78.27:2257,78,0	1/1:4,8:12:30.03:790,30,0
chr10	109343137	.	C	CAAGTT	41241.36	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-7.267;DP=653;FS=4.934;HRun=0;HaplotypeScore=132.7501;InbreedingCoeff=0.9618;MQ=77.10;MQ0=0;MQRankSum=-11.536;QD=76.94;ReadPosRankSum=3.000;VQSLOD=6.5159;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,22:30:77.94:2036,78,0	0/0:10,0:10:30.10:0,30,626	0/0:20,0:20:54.18:0,54,1029	0/0:25,0:25:54.12:0,54,988	1/1:4,16:21:54.18:1495,54,0	1/1:2,15:19:48.16:1425,48,0	1/1:8,20:28:72.25:2200,72,0	1/1:10,9:19:48.16:1384,48,0	1/1:1,33:34:93.32:2875,93,0	0/0:20,0:20:54.18:0,54,1093	0/0:6,0:6:15.05:0,15,307	1/1:4,24:28:69.07:2119,69,0	1/1:2,19:22:54.17:1654,54,0	1/1:5,26:31:84.20:2436,84,0	1/1:5,19:24:69.24:2065,69,0	0/0:35,1:36:3.26:0,3,1801	1/1:2,30:35:87.30:2693,87,0	1/1:3,17:20:57.20:1765,57,0	1/1:7,11:18:48.16:1465,48,0	1/1:1,14:16:39.13:1207,39,0	1/1:7,12:24:45.07:1191,45,0	1/1:1,14:16:42.14:1235,42,0	1/1:2,12:15:42.14:1291,42,0	1/1:3,26:29:72.25:2174,72,0	1/1:4,19:23:60.21:1764,60,0	1/1:6,21:30:84.26:2395,84,0	1/1:9,24:34:87.30:2626,87,0	1/1:2,17:20:60.21:1747,60,0
chr10	109345327	.	GTGT	G	1350.53	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=2.142;DP=272;FS=18.125;HRun=0;HaplotypeScore=58.6425;InbreedingCoeff=0.7526;MQ=79.08;MQ0=0;MQRankSum=-5.517;QD=27.56;ReadPosRankSum=-2.048;VQSLOD=1.6898;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.16:0,54,1048	0/0:5,0:5:14.84:0,15,279	0/0:16,0:14:33.69:0,34,646	0/0:13,0:11:21.51:0,22,318	./.	1/1:0,5:5:6.02:94,6,0	1/1:10,10:20:54.06:831,54,0	0/0:14,0:14:33.09:0,33,620	1/1:6,3:9:21.02:307,21,0	0/0:7,0:7:21.06:0,21,385	0/0:7,0:7:15.04:0,15,258	0/0:10,0:10:20.18:0,20,278	0/0:10,0:10:14.57:0,15,157	0/1:7,0:7:10.51:11,0,102	0/0:5,0:5:12.03:0,12,144	0/0:8,0:8:24.06:0,24,422	0/0:22,0:22:56.26:0,56,994	0/0:12,0:12:36.08:0,36,659	0/0:10,0:10:30.09:0,30,590	0/0:6,0:6:18.05:0,18,365	0/0:16,0:16:42.09:0,42,790	0/0:2,0:2:0.47:0,0,1	0/0:1,0:1:0.89:0,1,2	0/0:11,0:11:12.13:0,12,78	1/1:4,4:8:18.05:261,18,0	0/0:10,0:10:26.43:0,26,432	0/0:9,0:9:24.06:0,24,493	0/0:6,0:6:11.95:0,12,175
chr10	109345329	.	GT	G	831.74	PASS	AB=1.000;AC=19;AF=0.352;AN=54;BaseQRankSum=4.354;DP=279;FS=13.640;HRun=1;HaplotypeScore=59.8703;InbreedingCoeff=0.7179;MQ=77.20;MQ0=0;MQRankSum=-4.625;QD=10.27;ReadPosRankSum=-3.665;VQSLOD=-0.6579;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:50.74:0,51,603	0/0:5,0:5:14.84:0,15,176	0/0:16,0:14:30.33:0,30,354	0/0:12,0:10:4.82:0,5,101	./.	1/1:5,0:5:5.83:34,6,0	1/1:19,1:20:49.84:314,50,0	0/0:13,0:13:30.04:0,30,357	1/1:9,1:10:20.56:138,21,0	0/0:6,0:6:15.03:0,15,196	0/0:8,0:8:14.99:0,15,141	0/1:10,0:10:27.15:51,0,27	1/1:10,0:10:4.27:106,4,0	1/1:7,0:7:7.44:96,7,0	0/0:4,0:4:5.45:0,5,15	0/0:12,0:12:1.50:0,2,220	0/0:24,0:24:44.14:0,44,518	0/0:11,0:11:20.11:0,20,342	0/0:9,0:9:27.06:0,27,330	0/0:8,0:8:18.03:0,18,234	0/0:18,0:18:19.53:0,20,454	1/1:2,0:2:2.98:22,3,0	1/1:1,0:1:2.98:22,3,0	1/1:7,2:9:15.45:140,15,0	1/1:7,0:7:14.62:94,15,0	0/0:9,0:9:23.36:0,23,247	0/0:10,0:10:21.01:0,21,272	0/0:7,0:7:11.87:0,12,93
chr10	109345811	.	A	AC	629.74	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-2.829;DP=205;FS=0.000;HRun=5;HaplotypeScore=24.2901;InbreedingCoeff=0.7681;MQ=78.63;MQ0=0;MQRankSum=-0.244;QD=20.99;ReadPosRankSum=-1.365;VQSLOD=1.6971;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:24.06:0,24,258	0/0:3,0:3:9.02:0,9,97	0/0:12,0:10:20.70:0,21,193	0/0:10,0:10:0.76:0,1,101	1/1:0,3:3:9.03:118,9,0	1/1:0,5:5:12.04:158,12,0	1/1:4,9:13:18.06:237,18,0	0/0:11,0:11:9.43:0,9,123	1/1:0,4:4:9.03:118,9,0	0/0:7,0:7:15.01:0,15,161	0/0:1,0:1:3.01:0,3,32	0/0:10,0:10:24.06:0,24,256	0/0:7,0:7:15.03:0,15,158	0/0:7,0:7:21.05:0,21,225	0/0:14,0:14:39.10:0,39,418	0/0:5,0:5:15.04:0,15,159	0/0:8,0:8:24.06:0,24,257	0/0:10,0:10:30.08:0,30,322	0/0:2,0:2:6:0,6,56	0/0:6,0:6:18.05:0,18,193	0/0:16,0:16:39.08:0,39,411	0/0:5,0:5:12.03:0,12,129	0/0:7,0:7:18.04:0,18,193	0/0:6,0:6:9:0,9,88	1/1:1,4:5:12.04:157,12,0	0/0:3,0:3:9.02:0,9,97	0/0:11,0:11:30.07:0,30,320	0/0:3,0:3:9.02:0,9,97
chr10	109347526	.	T	TC	8442.49	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=0.541;DP=740;FS=2.164;HRun=1;HaplotypeScore=97.2150;InbreedingCoeff=0.9969;MQ=81.26;MQ0=0;MQRankSum=-8.112;QD=40.01;ReadPosRankSum=4.530;VQSLOD=5.0872;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1385	0/0:6,0:6:15.05:0,15,195	0/0:27,0:27:72.21:0,72,906	0/0:23,0:23:64.96:0,65,787	0/0:26,0:26:75.24:0,75,965	0/0:20,0:20:57.17:0,57,725	0/0:37,0:37:99:0,108,1373	0/0:29,0:29:84.26:0,84,1073	0/0:30,0:30:87.28:0,87,1127	0/0:19,0:19:54.18:0,54,701	0/0:12,0:12:36.10:0,36,443	1/1:1,47:48:99:1929,129,0	1/1:0,35:35:96.33:1437,96,0	1/1:0,34:34:93.32:1392,93,0	1/1:1,30:31:90.30:1348,90,0	0/0:33,0:33:96.29:0,96,1218	0/0:28,0:28:84.25:0,84,1073	0/0:28,0:28:84.27:0,84,1089	0/0:18,0:18:51.17:0,51,661	0/0:13,0:13:33.09:0,33,403	0/0:62,0:62:99:0,175,2256	1/1:0,22:22:50.96:764,51,0	1/1:0,16:16:45.15:673,45,0	1/1:1,24:25:60.20:899,60,0	0/0:21,0:21:63.20:0,63,806	0/0:18,0:18:54.17:0,54,691	0/0:33,0:33:96.31:0,96,1234	0/0:10,0:10:30.10:0,30,389
chr10	109348208	.	T	TGG	1984.80	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-0.189;DP=548;FS=7.388;HRun=9;HaplotypeScore=95.7502;InbreedingCoeff=0.9332;MQ=80.79;MQ0=0;MQRankSum=-1.445;QD=20.67;ReadPosRankSum=-1.198;VQSLOD=2.2633;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:62.81:0,63,640	0/0:7,0:7:18.04:0,18,191	0/0:15,0:15:7.22:0,7,136	0/0:19,0:19:20.79:0,21,204	1/1:6,2:8:6:69,6,0	1/1:10,5:17:21.07:305,21,0	1/1:6,24:33:65.19:938,65,0	0/0:18,0:18:39.07:0,39,413	1/1:7,17:25:41.63:609,42,0	0/0:15,0:15:36.08:0,36,383	0/0:7,0:7:14.73:0,15,159	0/0:41,0:41:87.13:0,87,913	0/0:17,0:17:33.05:0,33,351	0/0:26,0:26:60.08:0,60,629	0/0:21,0:21:54.07:0,54,554	0/0:21,0:21:45.05:0,45,479	0/0:19,0:19:36.06:0,36,383	0/0:25,0:26:50.81:0,51,522	0/0:21,0:24:32.85:0,33,443	0/0:7,0:7:11.99:0,12,127	0/0:57,0:60:99:0,123,1352	0/0:8,0:8:18.03:0,18,191	0/0:9,0:9:24.06:0,24,255	0/0:25,0:25:63.11:0,63,655	1/1:4,9:13:15.05:231,15,0	0/0:16,0:16:39.07:0,39,405	0/0:15,0:15:30.02:0,30,307	0/0:7,0:7:18.03:0,18,192
chr10	109352116	.	GGGT	G	3191.90	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=8.245;DP=523;FS=4.759;HRun=0;HaplotypeScore=79.4151;InbreedingCoeff=0.7134;MQ=83.00;MQ0=0;MQRankSum=-3.257;QD=16.98;ReadPosRankSum=-1.655;VQSLOD=2.4036;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.16:0,93,1847	0/0:12,0:12:30.07:0,30,572	0/0:16,0:14:42.11:0,42,707	0/0:21,0:21:52.84:0,53,777	1/1:4,17:21:29.47:372,29,0	1/1:1,17:18:42.06:636,42,0	1/1:2,24:26:63.21:1022,63,0	0/0:17,0:17:48.11:0,48,829	1/1:3,8:11:33.08:477,33,0	0/0:18,0:18:51.16:0,51,995	0/0:13,0:13:36.12:0,36,737	0/1:20,0:20:11.92:90,0,12	1/1:10,0:10:0.53:18,1,0	1/1:11,0:11:8.28:75,8,0	0/1:16,0:16:0.01:0,0,0	0/0:37,0:37:82.07:0,82,2124	0/0:32,0:32:96.33:0,96,1992	0/0:33,0:33:93.30:0,93,1928	0/0:16,0:16:42.08:0,42,749	0/0:14,0:14:42.11:0,42,790	0/0:32,0:32:90.25:0,90,1741	1/1:7,0:7:10.73:71,11,0	0/1:9,0:9:8.53:57,0,9	0/1:16,0:16:6.63:75,0,7	1/1:1,22:23:29.78:496,30,0	0/0:15,0:15:45.15:0,45,889	0/0:17,0:17:51.17:0,51,978	0/0:10,0:10:30.10:0,30,629
chr10	109352117	.	GGT	G	2353.58	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=10.457;DP=527;FS=0.403;HRun=0;HaplotypeScore=73.2742;InbreedingCoeff=0.9634;MQ=84.10;MQ0=0;MQRankSum=-2.630;QD=12.26;ReadPosRankSum=-4.249;VQSLOD=2.1851;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.15:0,93,1495	0/0:12,0:12:30.07:0,30,467	0/0:18,0:16:45.07:0,45,589	0/0:20,0:20:48.93:0,49,644	1/1:21,0:21:29.35:224,29,0	1/1:17,1:18:41.89:340,42,0	1/1:25,0:25:62.92:524,63,0	0/0:17,0:17:48.10:0,48,675	1/1:12,0:12:35.97:305,36,0	0/0:18,0:18:51.16:0,51,810	0/0:13,0:13:36.12:0,36,594	1/1:21,0:21:30.13:207,30,0	1/1:8,1:9:9.59:113,10,0	1/1:12,1:13:18.99:137,19,0	0/1:18,0:18:0.13:0,0,0	0/0:37,0:37:87.88:0,88,1686	0/0:32,0:32:96.33:0,96,1600	0/0:33,0:33:93.27:0,93,1543	0/0:15,0:15:42.07:0,42,599	0/0:14,0:14:42.11:0,42,641	0/0:32,0:32:93.24:0,93,1429	1/1:7,0:7:17.90:145,18,0	1/1:9,0:9:20.03:143,20,0	1/1:14,2:16:20.12:186,20,0	1/1:23,0:23:29.76:250,30,0	0/0:15,0:15:45.15:0,45,718	0/0:17,0:17:51.07:0,51,775	0/0:10,0:10:30.10:0,30,505
chr10	109352118	.	GT	G	2438.92	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=7.567;DP=524;FS=6.159;HRun=1;HaplotypeScore=63.7522;InbreedingCoeff=0.9716;MQ=84.97;MQ0=0;MQRankSum=-2.003;QD=14.43;ReadPosRankSum=-4.700;VQSLOD=1.1917;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.14:0,93,1173	0/0:12,0:12:30.02:0,30,361	0/0:18,0:16:45.04:0,45,507	0/0:21,0:21:55.51:0,56,580	1/1:18,0:18:29.14:189,29,0	1/1:18,0:18:41.41:270,41,0	1/1:25,0:25:62.04:400,62,0	0/0:19,0:19:54.08:0,54,593	1/1:13,0:13:35.65:258,36,0	0/0:18,0:18:51.15:0,51,642	0/0:13,0:13:36.10:0,36,456	1/1:19,2:21:55.35:444,55,0	1/1:8,0:8:20.92:165,21,0	1/1:11,1:12:23.96:217,24,0	0/0:0,18:18:0:0,0,0	0/0:37,0:37:93.77:0,94,1329	0/0:32,0:32:96.28:0,96,1234	0/0:32,0:32:93.27:0,93,1209	0/0:15,0:15:42.04:0,42,473	0/0:14,0:14:42.05:0,42,502	0/0:31,0:31:93.18:0,93,1130	1/1:6,1:7:17.90:145,18,0	1/1:7,2:9:18.82:165,19,0	1/1:13,2:15:27.79:216,28,0	1/1:22,1:23:29.57:192,30,0	0/0:17,0:17:48.11:0,48,585	0/0:17,0:17:51.04:0,51,603	0/0:10,0:10:30.10:0,30,397
chr10	109354286	.	TCC	T	4230.48	PASS	AB=0.839;AC=33;AF=0.589;AN=56;BaseQRankSum=-2.969;DP=462;FS=16.238;HRun=12;HaplotypeScore=86.8332;InbreedingCoeff=0.6933;MQ=67.48;MQ0=1;MQRankSum=-0.632;QD=13.56;ReadPosRankSum=4.131;VQSLOD=1.9420;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,10:21:29.97:302,30,0	0/1:4,0:4:0:0,0,0	0/0:17,0:15:27.01:0,27,265	0/0:26,0:18:34.32:0,34,332	1/1:7,7:13:21.02:213,21,0	1/1:5,17:22:48.08:488,48,0	1/1:7,11:18:28.43:329,28,0	1/1:17,11:31:0.83:260,1,0	1/1:3,9:12:10.54:281,11,0	0/0:10,0:11:11.50:0,11,102	0/0:10,0:10:9.50:0,10,136	0/0:15,0:23:37.41:0,37,175	0/0:8,0:16:20.46:0,20,85	0/1:12,1:16:14.18:14,0,44	0/0:17,0:25:19.61:0,20,69	0/0:9,0:11:28.54:0,29,311	1/1:7,14:22:50.65:497,51,0	1/1:5,6:11:11.98:122,12,0	1/1:6,8:14:30.01:297,30,0	1/1:3,8:11:18:183,18,0	1/1:12,16:29:38.62:373,39,0	0/0:6,0:6:2.97:0,3,10	0/0:4,0:4:2.99:0,3,24	0/1:20,1:33:8.41:8,0,152	1/1:7,8:15:0.38:162,0,0	1/1:9,6:15:20.99:213,21,0	1/1:4,9:13:36.05:366,36,0	1/1:5,6:11:11.98:122,12,0
chr10	109354307	.	TTG	T	793.22	PASS	AB=0.974;AC=17;AF=0.304;AN=56;BaseQRankSum=0.683;DP=589;FS=20.347;HRun=0;HaplotypeScore=160.7356;InbreedingCoeff=0.0080;MQ=54.33;MQ0=6;MQRankSum=0.089;QD=2.78;ReadPosRankSum=4.813;VQSLOD=1.3619;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,1:25:0.02:0,0,0	0/0:15,0:14:33.11:0,33,518	0/0:34,0:13:9.03:0,9,137	0/0:30,0:13:9.01:0,9,125	0/1:17,1:17:10.87:11,0,64	0/1:24,1:25:50.77:51,0,60	0/1:24,3:27:40.88:82,0,41	0/1:27,0:25:9.77:179,0,10	0/1:16,1:17:21.47:65,0,21	0/0:19,1:19:5.94:0,6,559	0/0:9,1:10:12.03:0,12,167	0/0:31,0:31:29.74:0,30,268	0/0:19,0:19:4.58:0,5,80	0/0:30,0:30:26.96:0,27,237	0/0:18,0:19:3.44:0,3,99	0/0:23,0:23:54.16:0,54,820	0/1:28,0:27:42.83:94,0,43	1/1:8,0:7:14.97:127,15,0	0/1:23,0:22:2.46:170,0,2	0/0:15,1:16:2.75:0,3,24	1/1:30,0:30:2.72:24,3,0	0/0:9,0:9:2.99:0,3,24	0/0:6,0:6:2.99:0,3,24	0/0:42,0:42:16.79:0,17,158	0/1:15,0:15:17.22:17,0,188	0/1:14,0:14:13.55:14,0,100	0/1:23,0:22:66.97:70,0,67	1/1:5,0:5:5.95:44,6,0
chr10	109354316	.	T	TGTGTGTGTGC	6491.89	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=3.387;DP=603;FS=0.465;HRun=0;HaplotypeScore=218.4498;InbreedingCoeff=0.2712;MQ=47.09;MQ0=8;MQRankSum=-4.817;QD=14.86;ReadPosRankSum=4.167;VQSLOD=3.7573;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,13:27:8.99:145,9,0	0/0:13,0:12:36.11:0,36,872	0/0:36,0:10:8.20:0,8,214	0/0:38,0:11:16.93:0,17,283	1/1:17,0:17:1.07:17,1,0	0/1:19,0:19:9.24:226,0,9	1/1:24,0:24:16.46:490,16,0	1/1:30,0:27:39.80:401,40,0	1/1:18,0:18:16.79:196,17,0	0/0:21,0:19:48.09:0,48,1113	0/0:7,0:7:12.03:0,12,266	0/1:29,0:29:86.69:183,0,87	0/1:15,0:15:52.78:149,0,53	0/1:31,0:31:18.65:193,0,19	0/1:18,0:18:92.36:92,0,143	0/0:21,0:21:63.16:0,63,1499	1/1:29,1:29:49.79:953,50,0	1/1:12,1:12:14.32:469,14,0	1/1:9,12:24:43.23:1037,43,0	0/1:14,0:14:9.91:176,0,10	0/1:38,0:38:33.41:42,0,33	0/0:16,0:15:2.22:0,2,7	1/1:9,0:9:3.01:36,3,0	0/1:40,0:40:99:124,0,127	0/0:13,0:13:29.88:0,30,565	0/1:16,0:16:1.13:602,0,1	1/1:17,1:17:32.97:904,33,0	1/1:5,0:5:5.73:56,6,0
chr10	109354320	.	T	TGTGTGC	4628.07	PASS	AB=0.993;AC=29;AF=0.518;AN=56;BaseQRankSum=4.402;DP=610;FS=0.456;HRun=0;HaplotypeScore=175.4118;InbreedingCoeff=-0.0035;MQ=44.86;MQ0=9;MQRankSum=-2.846;QD=10.10;ReadPosRankSum=4.367;VQSLOD=3.8685;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:30:11.11:11,0,33	0/0:13,0:12:36.11:0,36,728	0/0:35,0:7:15.02:0,15,229	0/0:39,0:11:17.84:0,18,239	1/1:6,9:16:11.87:85,12,0	1/1:15,5:21:10.10:390,10,0	1/1:24,4:28:29.64:686,30,0	0/1:29,0:26:58.12:212,0,58	1/1:7,10:19:7.50:257,8,0	0/0:20,0:18:51.12:0,51,970	0/0:8,0:8:18.02:0,18,263	0/1:28,0:28:22.94:412,0,23	0/1:16,0:16:95.51:228,0,96	1/1:31,0:31:17.58:460,18,0	0/1:18,0:18:99:146,0,165	0/0:22,0:22:66.15:0,66,1237	0/1:28,1:28:83.07:310,0,83	0/1:13,0:12:99:155,0,107	0/1:23,0:22:53.71:508,0,54	1/1:15,0:15:5.33:34,5,0	0/1:36,0:35:16.67:17,0,91	0/1:15,0:14:14.62:15,0,19	1/1:9,0:9:3.01:69,3,0	0/1:40,0:40:99:292,0,99	0/0:15,0:15:13.40:0,13,310	0/1:18,0:18:60.78:61,0,157	0/1:17,1:17:36.34:243,0,36	1/1:5,0:5:5.83:35,6,0
chr10	109354322	.	T	TGTGC	2464.03	PASS	AB=0.993;AC=24;AF=0.429;AN=56;BaseQRankSum=7.944;DP=606;FS=1.508;HRun=0;HaplotypeScore=168.3427;InbreedingCoeff=-0.2199;MQ=44.91;MQ0=9;MQRankSum=-3.241;QD=5.88;ReadPosRankSum=5.503;VQSLOD=2.2579;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:31:5.08:5,0,80	0/0:13,0:12:36.11:0,36,628	0/0:32,0:6:15.01:0,15,216	0/0:38,0:11:17.18:0,17,249	1/1:14,1:15:11.90:115,12,0	0/1:18,1:19:33.38:239,0,33	0/1:28,2:30:96.47:360,0,96	0/1:28,0:25:86:153,0,86	0/1:19,0:19:4.57:155,0,5	0/0:21,0:19:57.14:0,57,873	0/0:8,0:8:18.02:0,18,238	0/1:27,0:27:22.75:194,0,23	0/1:17,0:17:80.67:81,0,97	1/1:30,0:30:3.92:241,4,0	0/1:18,0:18:65.94:66,0,182	0/0:22,0:22:66.15:0,66,1067	0/1:29,0:28:95.24:223,0,95	0/1:14,0:13:99:116,0,112	0/1:21,0:20:99:279,0,105	0/1:16,0:16:13.94:14,0,40	0/0:36,0:35:4.13:0,4,133	0/1:14,0:13:17.95:27,0,18	1/1:10,0:10:3.01:31,3,0	0/1:40,0:40:93.30:135,0,93	0/0:15,0:15:29.88:0,30,423	0/1:18,0:18:12.11:12,0,233	0/1:18,0:17:54.51:149,0,55	1/1:4,0:4:5.86:35,6,0
chr10	109354330	.	T	TGTGTGC	3806.24	PASS	AB=0.910;AC=20;AF=0.357;AN=56;BaseQRankSum=2.312;DP=629;FS=10.064;HRun=0;HaplotypeScore=178.0751;InbreedingCoeff=0.2253;MQ=44.71;MQ0=11;MQRankSum=-4.749;QD=10.91;ReadPosRankSum=5.674;VQSLOD=1.8008;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:21.40:0,21,182	0/0:14,0:13:36.11:0,36,751	0/0:33,0:5:12.01:0,12,134	0/0:38,0:9:20.28:0,20,311	0/1:15,0:15:6.03:6,0,26	0/1:20,0:20:70.10:186,0,70	0/1:30,0:30:99:234,0,208	0/0:27,0:24:23.24:0,23,304	0/1:18,0:18:92.28:116,0,92	0/0:24,0:22:60.57:0,61,1111	0/0:5,0:5:14.84:0,15,289	1/1:5,23:35:29.93:718,30,0	1/1:14,2:18:18.12:532,18,0	1/1:3,26:35:26.66:724,27,0	1/1:17,1:19:23.37:367,23,0	0/0:23,0:23:66.20:0,66,1365	0/1:28,0:27:38.86:39,0,127	0/0:14,0:13:5.37:0,5,148	0/1:23,0:21:99:158,0,158	0/1:15,0:15:14:14,0,42	0/0:35,0:34:22.21:0,22,178	0/1:2,11:15:0.98:54,0,1	1/1:2,11:13:5.67:117,6,0	0/1:11,29:48:14.31:451,0,14	0/0:17,0:17:29.78:0,30,518	0/0:16,0:16:12.77:0,13,234	0/1:16,0:15:90.41:90,0,138	0/0:4,0:4:6.86:0,7,48
chr10	109354800	.	GAAA	G	2449.38	PASS	AB=0.894;AC=20;AF=0.357;AN=56;BaseQRankSum=9.113;DP=606;FS=2.715;HRun=19;HaplotypeScore=98.8279;InbreedingCoeff=0.5739;MQ=58.04;MQ0=11;MQRankSum=2.144;QD=8.11;ReadPosRankSum=8.617;VQSLOD=-0.5650;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,2:31:68.88:69,0,103	0/0:6,0:7:17.83:0,18,156	0/0:31,0:5:0.94:0,1,2	0/1:28,0:7:0.81:1,0,30	0/0:25,0:26:45.57:0,46,315	0/0:14,0:17:36.51:0,37,320	0/0:17,0:19:2.44:0,2,177	0/1:17,1:20:1.39:1,0,125	0/1:11,1:12:3.24:3,0,146	0/0:24,0:24:31.04:0,31,318	0/0:19,0:20:39.40:0,39,334	1/1:6,23:30:41.63:368,42,0	1/1:7,15:22:33.29:304,33,0	1/1:7,22:29:45.93:456,46,0	1/1:15,34:48:78.29:739,78,0	0/0:18,0:25:38.88:0,39,412	0/1:13,0:13:3.65:4,0,31	0/0:11,0:18:11.11:0,11,60	0/0:22,0:25:32.43:0,32,206	0/0:13,0:24:21.75:0,22,100	0/0:14,0:18:19.50:0,20,103	1/1:1,7:8:14.84:139,15,0	1/1:4,8:12:17.87:166,18,0	1/1:7,20:27:38.64:362,39,0	0/0:11,0:18:22.17:0,22,215	0/0:19,0:19:12.88:0,13,183	0/1:18,0:18:25.52:26,0,83	0/0:8,0:11:12.45:0,12,74
chr10	109355254	.	T	TG	13602.75	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-12.944;DP=706;FS=0.288;HRun=1;HaplotypeScore=117.1540;InbreedingCoeff=0.9985;MQ=80.75;MQ0=0;MQRankSum=-2.049;QD=39.20;ReadPosRankSum=3.029;VQSLOD=4.5808;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.27:0,81,1131	0/0:13,0:13:33.11:0,33,461	0/0:24,0:24:55.28:0,55,795	0/0:20,0:20:60.19:0,60,811	1/1:0,12:12:33.11:527,33,0	1/1:2,22:23:52.73:816,53,0	1/1:0,40:40:99:1725,108,0	0/0:28,0:28:84.25:0,84,1127	1/1:1,23:24:57.19:910,57,0	0/0:21,0:21:60.19:0,60,816	0/0:8,0:8:18.06:0,18,251	1/1:1,47:48:99:1820,114,0	1/1:0,37:37:99:1579,99,0	1/1:0,36:36:90.31:1435,90,0	1/1:1,42:43:99:1579,99,0	0/0:40,0:40:99:0,114,1576	0/0:34,0:34:96.32:0,96,1341	0/0:21,0:21:54.09:0,54,711	0/0:16,0:16:48.16:0,48,671	0/0:14,0:14:33.08:0,33,441	0/0:34,0:34:99:0,102,1393	1/1:0,12:12:27.09:431,27,0	1/1:0,14:14:30.10:479,30,0	1/1:0,36:36:90.31:1438,90,0	1/1:0,21:21:54.18:862,54,0	0/0:21,0:21:63.21:0,63,881	0/0:24,0:24:69.23:0,69,959	0/0:11,0:11:33.11:0,33,459
chr10	109362649	.	CTT	C	5871.98	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.028;DP=608;FS=1.584;HRun=4;HaplotypeScore=108.7210;InbreedingCoeff=0.9654;MQ=72.98;MQ0=0;MQRankSum=-8.220;QD=37.40;ReadPosRankSum=4.572;VQSLOD=3.9024;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,105,1879	0/0:12,0:12:36.11:0,36,645	0/0:12,0:12:30.10:0,30,481	0/0:11,0:11:2.36:0,2,453	0/0:19,0:19:54.17:0,54,974	0/0:23,0:23:60.20:0,60,1094	0/0:24,0:24:72.17:0,72,1241	0/0:35,0:35:99:0,99,1845	0/0:15,0:15:42.14:0,42,751	0/0:29,0:29:81.24:0,81,1351	0/0:12,0:12:36.12:0,36,668	1/1:1,20:21:63.01:847,63,0	1/1:3,24:27:66.22:963,66,0	1/1:2,15:17:45.15:649,45,0	1/1:3,34:37:96.31:1389,96,0	0/0:26,0:26:72.23:0,72,1290	0/0:22,0:22:63.18:0,63,1114	0/0:19,0:19:51.16:0,51,916	0/0:22,0:22:60.18:0,60,1088	0/0:22,0:22:66.23:0,66,1228	0/0:26,0:26:72.25:0,72,1342	1/1:0,13:13:36.12:529,36,0	1/1:0,21:21:53.76:792,54,0	1/1:0,21:21:47.22:702,47,0	0/0:21,0:21:63.21:0,63,1149	0/0:26,0:26:78.25:0,78,1378	0/0:24,0:24:47.86:0,48,809	0/0:11,0:11:30.10:0,30,562
chr10	109362669	.	C	CT	8812.14	PASS	AB=0.655;AC=43;AF=0.768;AN=56;BaseQRankSum=-2.883;DP=624;FS=8.376;HRun=10;HaplotypeScore=106.8687;InbreedingCoeff=0.8682;MQ=66.65;MQ0=0;MQRankSum=-4.028;QD=16.72;ReadPosRankSum=0.185;VQSLOD=4.3389;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,33:38:87.22:928,87,0	0/0:13,0:13:35.96:0,36,296	0/0:11,0:11:17.55:0,18,133	0/0:10,0:10:17.95:0,18,145	1/1:2,9:13:20.05:232,20,0	1/1:7,12:20:8.28:278,8,0	1/1:3,18:21:26.48:487,26,0	1/1:9,27:36:73.35:741,73,0	1/1:5,16:21:30.08:320,30,0	0/0:25,0:25:50.92:0,51,419	0/0:13,0:13:29.95:0,30,246	1/1:19,0:28:45.63:267,46,0	1/1:18,0:27:41.95:211,42,0	1/1:9,0:22:28.03:142,28,0	1/1:23,0:39:68.57:403,69,0	0/0:24,1:25:39.90:0,40,531	1/1:4,17:21:3.23:403,3,0	1/1:1,18:19:26.48:487,26,0	1/1:3,12:15:36.06:367,36,0	1/1:2,23:26:62.96:642,63,0	0/1:9,10:19:6.53:315,0,7	1/1:11,0:17:27.71:163,28,0	1/1:18,0:27:39.37:241,39,0	1/1:17,0:24:21.52:148,22,0	1/1:6,19:25:26.44:474,26,0	1/1:5,22:27:44.54:670,45,0	1/1:3,28:31:56.76:608,57,0	1/1:0,11:11:26.99:288,27,0
chr10	109363847	.	A	AT	15484.02	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-12.319;DP=680;FS=6.074;HRun=7;HaplotypeScore=62.4392;InbreedingCoeff=0.8891;MQ=62.78;MQ0=1;MQRankSum=-2.007;QD=27.85;ReadPosRankSum=-0.642;VQSLOD=5.3110;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,23:28:69.21:829,69,0	0/0:14,0:14:42.07:0,42,406	0/0:22,0:14:32.92:0,33,295	0/1:17,0:13:16.33:16,0,162	1/1:7,39:46:99:1361,114,0	1/1:7,24:30:72.22:870,72,0	1/1:1,15:16:42.13:507,42,0	1/1:2,22:23:66.17:773,66,0	1/1:3,18:21:51.16:616,51,0	0/0:29,0:29:81.11:0,81,775	0/0:20,0:21:59.12:0,59,556	1/1:4,16:20:42.13:507,42,0	1/1:3,15:18:45.14:544,45,0	1/1:4,13:17:33.10:399,33,0	1/1:0,35:35:99:1196,99,0	0/0:38,0:38:99:0,108,1037	1/1:4,27:31:72.18:853,72,0	1/1:3,14:17:42.13:503,42,0	1/1:9,18:27:44.91:533,45,0	1/1:5,20:25:57.13:672,57,0	1/1:2,10:12:25.89:295,26,0	1/1:3,13:16:36.11:435,36,0	1/1:1,20:21:48.15:580,48,0	1/1:2,18:20:54.17:652,54,0	1/1:4,22:25:60.18:725,60,0	1/1:6,31:37:61.35:1022,61,0	1/1:1,38:39:99:1232,102,0	1/1:1,11:12:30.09:362,30,0
chr10	109368895	.	CA	C	5830.84	PASS	AB=0.523;AC=13;AF=0.232;AN=56;BaseQRankSum=12.584;DP=720;FS=1.431;HRun=4;HaplotypeScore=76.5499;InbreedingCoeff=0.9254;MQ=86.40;MQ0=0;MQRankSum=-0.492;QD=30.53;ReadPosRankSum=4.555;VQSLOD=5.1783;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1690	0/0:6,0:6:18.06:0,18,259	0/0:26,0:26:56.23:0,56,847	0/0:22,0:22:49.82:0,50,685	0/0:20,0:20:57.19:0,57,817	0/0:21,0:21:63.18:0,63,883	0/0:37,0:37:99:0,111,1559	0/0:28,0:28:78.25:0,78,1105	0/0:16,0:16:45.15:0,45,648	0/0:26,0:26:72.20:0,72,1006	0/0:15,0:15:45.15:0,45,646	1/1:0,36:36:96.30:1187,96,0	1/1:1,26:27:72.22:889,72,0	1/1:2,29:31:78.25:966,78,0	1/1:0,26:26:63.20:781,63,0	0/0:30,0:30:84.27:0,84,1192	0/0:38,0:38:99:0,114,1615	0/0:40,1:41:80.77:0,81,1555	0/0:16,0:16:45.15:0,45,647	0/0:27,0:27:78.26:0,78,1121	0/0:35,0:35:96.32:0,96,1379	1/1:1,23:24:63.06:750,63,0	1/1:1,12:13:33.10:409,33,0	0/1:3,31:34:4.53:849,0,5	0/0:19,0:19:54.17:0,54,747	0/0:27,0:27:78.25:0,78,1091	0/0:27,0:26:72.24:0,72,1034	0/0:11,0:11:33.11:0,33,475
chr10	109371395	.	AC	A	5667.05	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.918;DP=643;FS=0.700;HRun=3;HaplotypeScore=62.6528;InbreedingCoeff=0.9992;MQ=80.01;MQ0=0;MQRankSum=-1.493;QD=33.73;ReadPosRankSum=4.388;VQSLOD=5.2640;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.27:0,81,1166	0/0:7,0:7:21.07:0,21,302	0/0:15,0:15:45.13:0,45,598	0/0:17,0:17:38.21:0,38,461	0/0:33,0:33:93.29:0,93,1301	0/0:25,0:25:75.24:0,75,1060	0/0:16,0:16:45.15:0,45,648	0/0:26,0:26:72.24:0,72,1036	0/0:17,0:17:51.17:0,51,734	0/0:29,0:29:84.25:0,84,1185	0/0:19,0:19:57.18:0,57,801	1/1:0,31:31:84.26:1041,84,0	1/1:0,18:18:51.16:632,51,0	1/1:0,21:21:63.20:781,63,0	1/1:1,28:29:81.25:1004,81,0	0/0:21,0:21:63.20:0,63,889	0/0:27,0:27:78.26:0,78,1123	0/0:19,0:19:57.19:0,57,818	0/0:28,0:28:75.21:0,75,1021	0/0:31,0:31:87.28:0,87,1226	0/0:27,0:27:78.26:0,78,1111	1/1:1,26:26:63.16:764,63,0	1/1:0,21:21:60.19:740,60,0	1/1:0,21:21:57.18:705,57,0	0/0:21,0:21:51.16:0,51,715	0/0:28,0:28:81.27:0,81,1151	0/0:26,0:26:72.24:0,72,1036	0/0:15,0:15:33.11:0,33,475
chr10	109372865	.	CTGTGTCTGCCCTACTGTGTATGGATGTACTTCA	C	1009.71	PASS	AB=0.967;AC=11;AF=0.196;AN=56;BaseQRankSum=3.983;DP=1307;FS=41.354;HRun=0;HaplotypeScore=465.5066;InbreedingCoeff=-0.2076;MQ=35.60;MQ0=304;MQRankSum=-4.905;QD=1.69;ReadPosRankSum=-3.097;VQSLOD=0.1788;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:77,0:38:21.16:21,0,156	0/0:22,0:22:51.17:0,51,1679	0/0:40,0:1:2.22:0,2,7	0/0:51,0:1:0:0,0,0	0/1:11,15:26:25.30:87,0,25	0/1:33,0:13:11.48:11,0,41	0/1:42,0:19:7.05:259,0,7	0/0:61,0:24:25.78:0,26,388	0/1:76,0:55:99:353,0,209	0/0:55,0:53:99:0,114,3272	0/0:20,0:19:42.01:0,42,1005	0/1:87,0:47:36.31:36,0,534	0/0:71,0:38:5.38:0,5,388	0/1:46,0:23:24.03:24,0,206	0/1:74,0:45:44.08:44,0,553	0/0:77,0:77:99:0,171,4980	0/0:28,0:21:15.02:0,15,196	0/0:20,0:16:13.15:0,13,135	0/0:57,0:13:20.62:0,21,172	0/0:25,0:14:3:0,3,25	0/0:90,0:52:23.77:0,24,332	0/0:27,0:14:11.04:0,11,137	0/0:10,0:8:12.40:0,12,200	0/1:45,0:30:31.85:32,0,267	0/1:48,0:39:99:261,0,196	0/0:39,0:15:3.57:0,4,209	0/1:43,0:25:22.11:22,0,172	0/0:17,0:12:17.87:0,18,130
chr10	109373107	.	CTACTGTGTATAGATGTACTTCCTATGTCTGCCT	C	1247.99	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=11.286;DP=1179;DS;FS=0.501;HRun=0;HaplotypeScore=438.2960;InbreedingCoeff=-0.0947;MQ=42.50;MQ0=238;MQRankSum=-8.046;QD=1.45;ReadPosRankSum=-2.750;VQSLOD=0.7388;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:16:9.02:25,0,9	0/0:14,0:14:42.13:0,42,978	0/0:43,0:16:46.03:0,46,879	0/0:51,0:17:51.11:0,51,1043	0/0:15,0:8:4.07:0,4,12	1/1:10,0:6:2.97:20,3,0	0/0:19,0:9:5.62:0,6,15	1/1:20,19:19:41.18:346,41,0	1/1:20,0:5:2.74:12,3,0	0/0:59,0:56:99:0,160,4394	0/0:19,0:19:51.16:0,51,1197	0/1:89,0:57:55.27:55,0,203	0/1:97,0:66:2.64:3,0,279	0/1:62,0:45:52.83:53,0,129	0/1:98,0:72:75.77:76,0,187	0/0:83,0:81:99:0,235,6271	0/1:33,0:18:15.44:40,0,15	0/1:22,0:9:5.05:168,0,5	1/1:18,0:2:2.97:20,3,0	0/1:33,0:13:4.82:5,0,40	0/1:99,0:50:27.49:257,0,27	0/1:31,0:24:15.26:15,0,19	0/0:15,0:10:1.87:0,2,27	0/1:51,0:38:10.15:112,0,10	0/1:21,0:11:8.96:17,0,9	0/1:33,0:13:65.59:72,0,66	0/1:50,0:24:14.84:96,0,15	1/1:13,0:9:2.96:19,3,0
chr10	109377724	.	G	GGCCCGGCAAT	17948.43	PASS	AB=0.806;AC=20;AF=0.357;AN=56;BaseQRankSum=-9.236;DP=538;FS=10.823;HRun=0;HaplotypeScore=148.8669;InbreedingCoeff=0.8364;MQ=82.48;MQ0=0;MQRankSum=-14.921;QD=77.03;ReadPosRankSum=-4.415;VQSLOD=3.3683;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,10:21:38.71:1423,39,0	0/0:7,0:7:21.04:0,21,615	0/0:13,0:13:36.10:0,36,926	0/0:23,0:23:60.10:0,60,1502	0/0:7,0:7:21.07:0,21,476	0/0:16,0:16:48.16:0,48,1158	0/1:16,0:16:17.79:18,0,940	1/1:9,10:36:99:3998,99,0	0/0:13,0:13:33.52:0,34,821	0/0:25,0:25:69.21:0,69,2052	0/0:9,0:9:24.08:0,24,713	0/0:25,0:25:72.25:0,72,2325	0/0:11,0:11:30.09:0,30,868	0/0:25,0:25:72.23:0,72,2294	0/0:37,0:37:99:0,105,3330	0/0:25,0:25:69.22:0,69,2050	1/1:5,9:22:38.92:1864,39,0	1/1:5,7:18:27.09:1427,27,0	1/1:5,7:22:59.91:2109,60,0	1/1:1,3:8:14.84:562,15,0	1/1:11,10:31:37.64:1126,38,0	0/0:18,0:18:48.15:0,48,1482	0/0:10,0:10:27.09:0,27,854	0/0:24,0:24:72.21:0,72,2148	0/0:17,0:17:51.08:0,51,1175	0/1:11,13:30:99:2751,0,317	1/1:8,13:25:45.15:2214,45,0	1/1:4,0:4:12.04:457,12,0
chr10	109381998	.	GAAGGAAGGAAGGAAGGAAGGAAGGAAGA	G	2942.82	PASS	AB=0.855;AC=7;AF=0.125;AN=56;BaseQRankSum=-4.703;DP=593;FS=13.426;HRun=0;HaplotypeScore=391.8581;InbreedingCoeff=0.5066;MQ=45.02;MQ0=35;MQRankSum=-2.310;QD=33.07;ReadPosRankSum=-2.150;VQSLOD=0.0857;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:30:75.21:0,75,2585	0/0:14,0:13:24.08:0,24,1384	0/0:7,0:2:2.88:0,3,17	0/0:4,0:3:2.99:0,3,24	0/1:5,17:20:3.23:159,0,3	0/1:14,0:12:92.87:158,0,93	1/1:16,0:16:45.12:1127,45,0	0/0:40,0:38:99:0,105,3180	0/1:16,0:14:46.89:367,0,47	0/0:23,0:23:63.10:0,63,4081	0/0:22,0:20:57.20:0,57,3016	0/0:21,0:20:46:0,46,958	0/0:18,0:15:39.12:0,39,1319	0/0:25,0:24:69.21:0,69,2103	0/0:9,0:6:12.04:0,12,400	0/0:22,0:22:60.16:0,60,3729	0/0:37,0:28:78.10:0,78,2928	0/0:13,0:11:33.11:0,33,1124	0/0:21,0:19:57.14:0,57,2470	0/0:27,0:23:54.18:0,54,1758	0/0:23,0:22:54.19:0,54,1967	0/0:27,0:27:75.20:0,75,2021	0/0:19,0:19:45.05:0,45,1232	0/0:33,0:32:87.23:0,87,2341	1/1:21,0:17:42.13:1274,42,0	0/0:28,0:26:72.23:0,72,3248	0/0:24,0:22:55.69:0,56,2096	0/0:11,0:9:24.06:0,24,721
chr10	109382670	.	C	CTTT	2953.94	PASS	AB=0.693;AC=40;AF=0.714;AN=56;BaseQRankSum=4.022;DP=624;FS=4.710;HRun=15;HaplotypeScore=122.5355;InbreedingCoeff=0.4072;MQ=62.98;MQ0=4;MQRankSum=-4.468;QD=5.57;ReadPosRankSum=-3.809;VQSLOD=-0.3774;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,2:37:52.79:421,53,0	0/0:8,0:10:11.67:0,12,105	0/0:11,0:7:10.31:0,10,45	0/0:22,0:17:6.18:0,6,95	0/1:9,0:22:36.34:36,0,41	1/1:5,0:17:11.04:60,11,0	0/1:9,0:20:12.87:26,0,13	1/1:13,0:23:13.53:246,14,0	1/1:14,0:16:6.41:33,6,0	0/0:30,0:30:2.73:0,3,231	0/0:18,0:19:29.12:0,29,256	1/1:13,0:27:17.84:145,18,0	1/1:13,4:22:17.90:163,18,0	1/1:12,0:25:27.11:217,27,0	1/1:6,0:24:13.42:97,13,0	0/1:28,0:28:3.98:4,0,218	1/1:12,1:34:26.73:202,27,0	0/1:7,1:23:13.57:102,0,14	1/1:18,1:28:28.06:237,28,0	1/1:10,0:18:18.25:122,18,0	1/1:17,0:17:15.77:89,16,0	1/1:5,1:19:22.95:179,23,0	0/1:8,0:18:20.48:37,0,20	1/1:11,0:26:20.80:149,21,0	1/1:11,0:26:22.16:118,22,0	1/1:14,0:27:37.39:261,37,0	1/1:12,0:14:14.24:79,14,0	0/1:8,1:16:17.24:112,0,17
chr10	109382826	.	T	TCTC	22332.98	PASS	AB=0.551;AC=33;AF=0.589;AN=56;BaseQRankSum=-10.954;DP=649;FS=2.753;HRun=0;HaplotypeScore=83.9114;InbreedingCoeff=0.9437;MQ=81.24;MQ0=1;MQRankSum=-5.731;QD=51.46;ReadPosRankSum=2.998;VQSLOD=7.3286;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,39:42:93.19:2038,93,0	0/0:14,0:14:42.10:0,42,632	0/0:21,0:21:60.16:0,60,946	0/0:19,0:19:50.82:0,51,705	0/0:18,0:18:48.16:0,48,794	0/0:19,0:19:54.17:0,54,889	0/0:34,0:34:96.27:0,96,1523	1/1:1,18:18:48.16:1032,48,0	0/0:23,0:23:66.17:0,66,1092	0/0:17,0:17:45.14:0,45,722	0/0:13,0:13:36.11:0,36,582	1/1:0,28:27:60.16:1332,60,0	1/1:0,19:22:45.15:1023,45,0	1/1:0,36:37:93.17:2129,93,0	1/1:1,25:25:63.22:1441,63,0	0/0:19,0:19:54.18:0,54,920	1/1:2,26:28:63.22:1451,63,0	1/1:0,22:22:51.18:1175,51,0	1/1:2,12:14:36.10:772,36,0	1/1:2,23:25:66.02:1414,66,0	1/1:4,37:43:90.27:1993,90,0	1/1:1,28:30:63.22:1450,63,0	1/1:0,12:12:33.11:760,33,0	1/1:1,38:38:78.27:1796,78,0	0/0:18,0:18:42.14:0,42,712	0/1:5,22:27:3.69:1354,0,4	1/1:0,16:16:39.13:898,39,0	1/1:0,4:4:12.04:277,12,0
chr10	109383424	.	G	GC	3886.84	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-10.297;DP=498;FS=0.000;HRun=5;HaplotypeScore=48.7248;InbreedingCoeff=0.8786;MQ=72.63;MQ0=0;MQRankSum=-0.260;QD=29.67;ReadPosRankSum=2.708;VQSLOD=3.8479;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:70.89:0,71,719	0/0:1,0:1:3.01:0,3,32	0/1:9,0:9:4.74:5,0,162	0/0:8,0:7:14.96:0,15,135	0/0:8,0:8:21.05:0,21,225	0/0:15,0:15:36.08:0,36,386	0/0:27,0:27:81.20:0,81,870	0/0:29,0:29:60.14:0,60,644	0/0:29,0:29:78.18:0,78,829	0/0:9,0:9:24.05:0,24,252	0/0:9,0:9:20.88:0,21,185	1/1:1,15:17:42.14:552,42,0	1/1:0,14:14:42.14:551,42,0	1/1:0,18:18:48.16:631,48,0	1/1:1,18:19:51.17:670,51,0	0/0:16,0:16:48.12:0,48,516	0/0:44,0:44:99:0,129,1372	0/0:26,0:26:69.15:0,69,733	0/0:19,0:19:55.93:0,56,575	0/0:9,0:9:18.02:0,18,184	0/0:37,0:37:89.36:0,89,917	1/1:2,5:7:9.03:118,9,0	1/1:6,4:10:18.05:214,18,0	1/1:4,33:37:89.72:1146,90,0	0/0:17,0:17:40.91:0,41,379	0/0:10,0:10:24.06:0,24,258	0/0:20,0:20:57.12:0,57,601	0/0:5,0:5:12.03:0,12,129
chr10	109384153	.	G	GTGAAA	7971.47	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-6.526;DP=728;FS=0.000;HRun=0;HaplotypeScore=133.9719;InbreedingCoeff=0.9973;MQ=78.18;MQ0=0;MQRankSum=-8.052;QD=68.72;ReadPosRankSum=0.736;VQSLOD=5.5031;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,2092	0/0:14,0:14:39.13:0,39,831	0/0:18,0:18:38.41:0,38,842	0/0:26,0:26:69.24:0,69,1389	1/1:4,14:18:35.98:904,36,0	1/1:8,20:30:72.13:2031,72,0	1/1:5,10:16:39.11:1094,39,0	0/0:32,0:32:84.29:0,84,1769	1/1:4,20:24:69.24:2158,69,0	0/0:30,0:30:84.25:0,84,1677	0/0:16,0:16:45.15:0,45,959	0/0:36,0:36:99:0,99,1975	0/0:23,0:23:69.18:0,69,1424	0/0:27,0:27:81.28:0,81,1724	0/0:38,0:38:99:0,108,2299	0/0:38,1:39:17.39:0,17,2207	0/0:38,0:38:99:0,105,2153	0/0:26,0:26:75.26:0,75,1555	0/0:20,0:20:60.16:0,60,1209	0/0:19,0:19:54.17:0,54,1111	0/0:41,0:40:99:0,114,2399	0/0:20,0:20:60.19:0,60,1240	0/0:9,0:9:24.08:0,24,512	0/0:31,0:31:90.31:0,90,1903	1/1:8,18:27:72.07:1784,72,0	0/0:27,0:27:66.20:0,66,1352	0/0:27,0:27:75.26:0,75,1588	0/0:18,0:18:54.19:0,54,1133
chr10	109384296	.	GCACACACACACA	G	2801.38	PASS	AB=0.854;AC=14;AF=0.269;AN=52;BaseQRankSum=2.479;DP=504;FS=18.533;HRun=0;HaplotypeScore=189.9736;InbreedingCoeff=-0.0491;MQ=54.56;MQ0=10;MQRankSum=-3.239;QD=14.90;ReadPosRankSum=-0.615;VQSLOD=1.5410;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,2:17:3.01:70,3,0	0/0:9,0:9:27.09:0,27,1286	0/0:31,0:13:10.04:0,10,570	0/0:45,0:31:52:0,52,1683	0/0:4,0:8:3.01:0,3,48	0/1:15,0:16:46.59:125,0,47	0/1:5,0:10:27.48:27,0,53	1/1:14,7:19:21.07:737,21,0	0/1:11,0:10:20.53:21,0,143	0/0:26,0:26:57.20:0,57,2789	0/0:15,0:14:39.13:0,39,1883	0/0:25,0:25:23.99:0,24,824	0/0:25,0:25:38.71:0,39,1187	0/0:14,0:13:18.06:0,18,548	0/0:24,0:24:39.13:0,39,1135	0/0:15,0:15:36.12:0,36,1923	0/1:12,2:15:99:232,0,138	0/1:20,1:21:99:589,0,218	0/1:12,1:13:46.29:178,0,46	0/1:9,2:11:25.30:25,0,61	./.	0/0:14,0:14:24.08:0,24,651	0/0:17,0:15:25.29:0,25,682	0/0:24,0:24:30.10:0,30,1009	0/1:12,0:13:61.28:61,0,127	0/1:14,5:20:99:540,0,133	0/1:13,4:18:99:352,0,171	./.
chr10	109384354	.	A	AGAGAGAGAGAGAGG	6319.86	PASS	AB=0.914;AC=30;AF=0.536;AN=56;BaseQRankSum=1.048;DP=590;FS=2.440;HRun=0;HaplotypeScore=231.4879;InbreedingCoeff=0.3180;MQ=58.85;MQ0=11;MQRankSum=-7.342;QD=14.60;ReadPosRankSum=-0.721;VQSLOD=3.6284;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:22:13.63:14,0,181	0/0:11,0:11:32.91:0,33,730	0/0:29,0:16:40.06:0,40,433	0/0:27,0:12:29.90:0,30,361	1/1:19,0:18:34.79:286,35,0	1/1:22,0:20:47.31:429,47,0	1/1:10,0:10:16.24:179,16,0	0/1:32,0:32:99:636,0,347	1/1:12,0:15:24.04:666,24,0	0/0:19,0:19:54.08:0,54,1248	0/0:20,0:20:45.01:0,45,1179	1/1:18,1:35:16.59:759,17,0	1/1:8,15:26:18.06:886,18,0	0/1:2,0:11:0:0,0,0	1/1:10,0:23:6.02:325,6,0	0/0:20,0:20:33.05:0,33,1556	0/1:21,0:21:99:113,0,262	0/1:18,0:18:99:190,0,224	0/1:28,0:27:99:168,0,450	0/1:21,0:21:99:105,0,247	0/0:20,0:19:35.91:0,36,288	1/1:14,0:13:15.01:246,15,0	1/1:5,0:17:0.22:1,0,0	0/1:6,0:19:2.08:2,0,13	1/1:17,0:17:23.91:199,24,0	0/1:35,0:32:99:599,0,428	0/1:20,0:20:65.41:516,0,65	0/0:11,0:10:26.96:0,27,220
chr10	109385382	.	AAC	A	1045.85	PASS	AB=0.881;AC=23;AF=0.479;AN=48;BaseQRankSum=2.354;DP=564;FS=8.712;HRun=0;HaplotypeScore=101.4650;InbreedingCoeff=0.3646;MQ=62.03;MQ0=5;MQRankSum=0.860;QD=3.24;ReadPosRankSum=1.528;VQSLOD=1.7495;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,6:37:12:119,12,0	./.	./.	./.	0/0:8,0:12:0:0,0,0	0/0:11,0:17:0.47:0,0,1	0/1:16,0:16:0:0,0,0	./.	1/1:10,0:21:8.48:42,8,0	0/0:19,0:19:5.98:0,6,64	0/1:9,0:10:19.68:26,0,20	0/0:17,0:16:14.92:0,15,204	0/0:18,0:18:9.03:0,9,133	0/0:13,0:13:11.93:0,12,173	0/0:16,0:16:12.04:0,12,174	0/1:18,2:19:34.18:34,0,323	1/1:13,10:24:30.08:322,30,0	0/1:14,2:16:8.73:55,0,9	1/1:12,2:14:6.02:64,6,0	1/1:8,2:10:6.02:64,6,0	1/1:41,3:44:18.25:154,18,0	0/0:16,0:16:13.86:0,14,179	0/0:13,0:14:9.02:0,9,112	0/1:21,3:25:50.15:50,0,238	0/1:23,0:33:0.11:0,0,0	1/1:22,2:24:8.85:79,9,0	1/1:15,2:18:11.36:109,11,0	0/1:6,3:9:32.09:84,0,32
chr10	109385562	.	G	GAGGA	7532.18	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-12.343;DP=685;FS=1.819;HRun=0;HaplotypeScore=115.2310;InbreedingCoeff=0.9994;MQ=60.84;MQ0=0;MQRankSum=-2.333;QD=47.37;ReadPosRankSum=3.221;VQSLOD=5.8491;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,114,1993	0/0:11,0:11:33.11:0,33,583	0/0:25,0:25:63.19:0,63,1061	0/0:29,0:29:59.75:0,60,989	0/0:28,0:28:75.26:0,75,1325	0/0:19,0:19:51.17:0,51,882	0/0:23,0:23:57.18:0,57,955	0/0:40,0:40:93.31:0,93,1599	0/0:23,0:22:57.20:0,57,997	0/0:21,0:21:54.18:0,54,936	0/0:14,0:14:36.12:0,36,636	1/1:5,12:17:36.12:882,36,0	1/1:2,15:18:48.16:1197,48,0	1/1:7,17:26:54.18:1345,54,0	1/1:7,20:28:54.19:1383,54,0	0/0:22,0:22:63.22:0,63,1103	0/0:37,0:37:99:0,111,1909	0/0:32,0:32:81.25:0,81,1392	0/0:21,0:21:54.17:0,54,926	0/0:28,0:28:78.27:0,78,1378	0/0:26,0:26:63.21:0,63,1097	1/1:8,18:26:48.16:1153,48,0	1/1:5,11:18:24.01:572,24,0	1/1:6,19:26:38.88:1000,39,0	0/0:25,0:25:63.20:0,63,1084	0/0:25,0:25:63.22:0,63,1103	0/0:24,0:24:63.18:0,63,1056	0/0:10,0:10:30.10:0,30,514
chr10	109385743	.	TC	T	2800	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.670;DP=621;FS=22.597;HRun=4;HaplotypeScore=60.8260;InbreedingCoeff=0.9989;MQ=69.38;MQ0=1;MQRankSum=0.129;QD=30.43;ReadPosRankSum=2.581;VQSLOD=1.8559;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,1851	0/0:10,0:10:24.55:0,25,341	0/0:29,0:27:78.21:0,78,1059	0/0:22,0:22:57.19:0,57,798	1/1:0,17:17:42.13:521,42,0	1/1:1,16:17:45.14:558,45,0	1/1:2,19:21:51.16:632,51,0	0/0:28,0:28:84.27:0,84,1192	1/1:1,24:25:66.21:818,66,0	0/0:24,0:23:66.20:0,66,929	0/0:12,0:11:33.08:0,33,438	0/0:20,0:20:60.18:0,60,845	0/0:25,0:25:75.25:0,75,1079	0/0:24,0:24:66.22:0,66,949	0/0:23,0:23:69.22:0,69,976	0/0:38,0:38:99:0,111,1595	0/0:24,1:25:66.22:0,66,948	0/0:19,0:19:54.14:0,54,751	0/0:15,0:15:44.87:0,45,583	0/0:15,0:15:36.09:0,36,482	0/0:30,0:30:90.27:0,90,1251	0/0:10,0:10:24.08:0,24,346	0/0:16,0:16:42.14:0,42,603	0/0:27,1:28:41.05:0,41,1025	1/1:0,12:12:36.11:446,36,0	0/0:21,0:21:62.95:0,63,875	0/0:34,0:34:99:0,102,1447	0/0:14,0:14:39.13:0,39,562
chr10	109386120	.	G	GTATT	19504.59	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-13.713;DP=825;FS=10.354;HRun=0;HaplotypeScore=126.3489;InbreedingCoeff=0.9998;MQ=84.36;MQ0=0;MQRankSum=-8.578;QD=64.58;ReadPosRankSum=-1.755;VQSLOD=6.3710;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,42:45:99:2907,111,0	0/0:9,0:9:27.09:0,27,500	0/0:34,0:34:90.31:0,90,1607	0/0:28,0:28:72.18:0,72,1237	0/0:20,0:20:57.20:0,57,1064	0/0:27,0:27:69.24:0,69,1287	0/0:36,0:36:99:0,105,1943	1/1:10,22:34:99:2433,99,0	0/0:28,0:28:84.29:0,84,1568	0/0:26,0:26:69.23:0,69,1250	0/0:17,0:17:42.14:0,42,784	0/0:38,0:38:99:0,108,1921	0/0:29,0:29:81.28:0,81,1505	0/0:31,0:31:87.26:0,87,1558	0/0:47,0:47:99:0,135,2477	0/0:49,0:49:99:0,135,2474	1/1:5,32:37:96.29:2465,96,0	1/1:4,19:23:48.16:1253,48,0	1/1:8,20:28:75.26:1932,75,0	1/1:3,34:37:99:2180,102,0	1/1:7,24:31:68.79:1517,69,0	0/0:23,0:23:69.22:0,69,1256	0/0:24,0:24:72.20:0,72,1239	0/0:36,0:36:99:0,105,1861	0/0:21,0:21:60.21:0,60,1120	1/1:1,21:24:69.24:1826,69,0	1/1:2,26:28:81.28:2112,81,0	1/1:1,13:14:33.11:880,33,0
chr10	109387977	.	CTTTTTTTCTT	C	2161.26	PASS	AB=0.971;AC=19;AF=0.339;AN=56;BaseQRankSum=-4.231;DP=361;FS=19.207;HRun=0;HaplotypeScore=103.9505;InbreedingCoeff=0.5403;MQ=52.75;MQ0=21;MQRankSum=1.322;QD=15.11;ReadPosRankSum=-2.019;VQSLOD=0.3205;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,3:24:44.74:624,45,0	0/0:13,0:12:22.80:0,23,623	0/0:26,0:7:4.14:0,4,24	0/0:28,0:5:0.01:0,0,13	0/1:10,0:9:33.31:33,0,67	0/0:11,0:10:10.10:0,10,48	0/1:13,0:13:35.02:35,0,120	0/1:11,0:10:21.97:78,0,22	0/0:11,0:10:8.37:0,8,38	0/0:19,0:17:44.18:0,44,862	0/0:11,0:11:24.01:0,24,579	0/0:10,0:10:23.11:0,23,660	0/0:13,0:11:17.96:0,18,482	0/0:6,0:6:12:0,12,318	0/0:12,0:11:24.06:0,24,919	0/0:7,0:7:12.40:0,12,364	1/1:13,2:14:24.60:428,25,0	0/1:10,2:11:1.22:234,0,1	1/1:10,0:9:8.70:93,9,0	0/1:13,0:13:4.91:126,0,5	1/1:8,0:7:17.55:117,18,0	0/0:8,0:8:17.92:0,18,370	0/0:13,0:11:26.97:0,27,726	0/0:9,0:7:8.23:0,8,293	0/0:19,0:18:14.16:0,14,77	1/1:11,0:12:17.56:324,18,0	1/1:11,0:11:22.49:161,22,0	1/1:3,0:3:6.02:97,6,0
chr10	109387980	.	TTTTTC	T	2348.93	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=-1.460;DP=353;FS=0.709;HRun=0;HaplotypeScore=74.3404;InbreedingCoeff=0.3513;MQ=48.49;MQ0=26;MQRankSum=-1.587;QD=11.24;ReadPosRankSum=-1.646;VQSLOD=2.2826;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:25:17.40:294,0,17	0/0:12,0:11:16.67:0,17,305	1/1:27,0:5:0.29:2,0,0	0/0:28,0:4:1.41:0,1,7	1/1:8,2:9:20.99:264,21,0	1/1:4,7:10:15.05:265,15,0	1/1:8,5:13:29.90:353,30,0	0/1:11,0:10:20.06:86,0,20	1/1:3,8:10:8.80:171,9,0	0/0:18,0:16:23.46:0,23,479	0/0:12,0:11:23.88:0,24,331	0/0:10,0:10:26.53:0,27,354	0/0:12,0:10:12.60:0,13,226	0/0:6,0:6:11.94:0,12,182	0/0:11,0:10:23.91:0,24,463	0/0:6,0:6:12.37:0,12,204	0/1:16,0:15:82.35:137,0,82	0/1:12,0:11:31.32:118,0,31	0/1:8,0:7:18.26:25,0,18	0/1:13,0:13:26.19:96,0,26	1/1:8,0:7:16.43:110,16,0	0/0:8,0:8:11.90:0,12,174	0/0:12,0:10:20.11:0,20,394	0/0:9,0:6:6.96:0,7,156	1/1:3,14:16:18.06:310,18,0	0/1:11,0:11:30.40:165,0,30	1/1:11,0:11:3.07:125,3,0	1/1:3,0:3:4.15:15,4,0
chr10	109387993	.	T	TGG	515.87	PASS	AB=0.905;AC=12;AF=0.214;AN=56;BaseQRankSum=-0.167;DP=298;FS=4.272;HRun=0;HaplotypeScore=61.6593;InbreedingCoeff=0.0114;MQ=45.94;MQ0=27;MQRankSum=2.217;QD=3.85;ReadPosRankSum=-1.395;VQSLOD=1.7180;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,3:20:99:156,0,165	0/0:10,0:9:20.53:0,21,337	1/1:22,0:3:0.27:2,0,0	0/1:26,0:4:22.62:23,0,23	0/0:10,0:9:8.13:0,8,90	0/0:8,0:7:10.69:0,11,116	0/0:11,0:11:21.02:0,21,216	0/1:11,0:10:43.65:44,0,202	0/0:11,0:10:14.78:0,15,156	0/0:15,0:13:39.05:0,39,525	0/0:9,0:8:18.03:0,18,249	0/0:10,0:10:26.95:0,27,353	0/0:10,0:8:21.06:0,21,287	0/0:5,0:5:12.04:0,12,179	0/0:10,0:9:24.07:0,24,330	0/0:5,0:5:11.63:0,12,160	0/1:12,3:15:99:148,0,167	0/1:9,2:10:49.46:49,0,65	0/0:5,0:5:3.55:0,4,81	0/1:8,0:8:5.14:5,0,146	0/0:4,0:2:0:0,0,0	0/0:5,0:5:15.05:0,15,219	0/0:13,0:10:27.06:0,27,366	0/0:8,0:5:0.08:0,0,90	0/0:15,0:14:17.69:0,18,155	0/1:6,1:7:45.61:81,0,46	0/1:6,1:7:57.49:57,0,91	1/1:2,2:4:7.19:88,7,0
chr10	109387994	.	T	TTTC	388.91	PASS	AB=0.810;AC=10;AF=0.179;AN=56;BaseQRankSum=4.483;DP=298;FS=0.000;HRun=0;HaplotypeScore=65.5912;InbreedingCoeff=0.3976;MQ=45.76;MQ0=27;MQRankSum=-2.703;QD=4.52;ReadPosRankSum=2.040;VQSLOD=1.6176;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:21.69:0,22,203	0/0:10,0:9:20.11:0,20,254	1/1:22,0:3:4.34:14,4,0	0/0:26,0:4:6.84:0,7,33	0/1:4,7:10:6.03:149,0,6	1/1:8,0:7:4.64:38,5,0	0/1:7,5:12:20.38:134,0,20	0/0:11,0:10:29.43:0,29,190	0/1:11,1:11:5.03:46,0,5	0/0:15,0:13:31.39:0,31,306	0/0:9,0:8:14.93:0,15,163	0/0:10,0:10:23.56:0,24,202	0/0:10,0:8:20.37:0,20,146	0/0:5,0:5:6.62:0,7,73	0/0:10,0:9:21:0,21,232	0/0:5,0:5:11.54:0,12,116	0/0:16,0:15:12.21:0,12,195	0/0:11,0:10:14.44:0,14,118	0/0:4,0:5:7.96:0,8,81	0/0:8,0:8:17.80:0,18,150	0/0:2,0:2:0:0,0,0	0/0:5,0:5:11.99:0,12,123	0/0:13,0:10:25.53:0,26,240	0/0:8,0:5:6.49:0,6,91	1/1:14,1:14:7.63:140,8,0	0/1:6,0:6:2.24:2,0,104	0/0:6,0:6:5.93:0,6,46	0/0:4,0:4:4.81:0,5,31
chr10	109388086	.	GC	G	4784.29	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=10.330;DP=503;FS=38.726;HRun=5;HaplotypeScore=138.2110;InbreedingCoeff=0.9586;MQ=66.53;MQ0=1;MQRankSum=-2.294;QD=14.15;ReadPosRankSum=3.535;VQSLOD=2.2354;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:51,0:51:99:398,108,0	0/0:6,0:6:15.05:0,15,205	0/0:13,0:11:26.44:0,26,376	0/0:13,1:12:30.10:0,30,399	0/0:13,0:13:27.09:0,27,369	0/0:14,0:14:42.14:0,42,574	0/0:29,0:29:78.26:0,78,1067	1/1:20,0:19:24.26:137,24,0	0/0:24,0:23:54.14:0,54,715	0/0:12,0:12:36.12:0,36,492	0/0:9,0:9:24.08:0,24,328	1/1:0,19:19:54.15:611,54,0	1/1:0,13:13:36.10:408,36,0	1/1:0,12:12:36.10:408,36,0	1/1:1,20:21:19.13:605,19,0	0/0:22,0:22:63.21:0,63,861	1/1:34,0:34:59.81:230,60,0	1/1:22,0:22:46.19:161,46,0	1/1:13,0:13:6.82:64,7,0	1/1:9,0:9:16.11:59,16,0	1/1:44,0:44:99:385,102,0	1/1:0,13:13:27.08:306,27,0	1/1:0,7:7:12.03:136,12,0	1/1:0,21:21:54.15:612,54,0	0/0:9,0:9:27.09:0,27,369	1/1:20,0:20:31.80:136,32,0	1/1:16,0:16:19.74:106,20,0	1/1:3,0:3:5.17:20,5,0
chr10	109388092	.	T	TG	9399.94	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=5.801;DP=528;FS=39.960;HRun=1;HaplotypeScore=122.9657;InbreedingCoeff=0.9762;MQ=67.77;MQ0=1;MQRankSum=0.137;QD=38.06;ReadPosRankSum=1.240;VQSLOD=1.8088;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,53:54:99:2092,141,0	0/0:5,0:5:15.05:0,15,195	0/0:13,0:13:27.12:0,27,427	0/0:12,0:12:30.07:0,30,372	0/0:11,0:11:30.10:0,30,389	0/0:15,0:15:45.15:0,45,583	0/0:28,0:28:78.24:0,78,997	1/1:5,17:21:54.18:791,54,0	0/0:23,0:22:60.19:0,60,770	0/0:16,0:16:45.15:0,45,584	0/0:11,0:11:27.09:0,27,346	0/0:19,0:19:54.13:0,54,587	0/0:16,0:16:42.11:0,42,473	0/0:13,0:13:39.10:0,39,431	0/0:23,0:23:63.16:0,63,709	0/0:22,0:22:63.20:0,63,818	1/1:3,34:39:93.16:1315,93,0	1/1:2,21:23:63.21:942,63,0	1/1:2,11:14:39.13:559,39,0	1/1:1,8:9:21.07:314,21,0	1/1:0,47:47:99:1901,129,0	0/0:13,0:13:27.07:0,27,304	0/0:7,0:7:12.03:0,12,138	0/0:23,0:23:60.15:0,60,671	0/0:11,0:11:33.11:0,33,428	1/1:0,19:19:51.13:738,51,0	1/1:3,14:18:48.08:658,48,0	1/1:0,2:2:6.02:90,6,0
chr10	109389690	.	CAG	C	7150.44	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.344;DP=747;FS=2.763;HRun=0;HaplotypeScore=89.6285;InbreedingCoeff=0.9893;MQ=79.61;MQ0=2;MQRankSum=-3.135;QD=38.24;ReadPosRankSum=4.133;VQSLOD=7.0441;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,2350	0/0:11,0:11:30.10:0,30,562	0/0:16,0:16:41.73:0,42,706	0/0:20,0:20:60.20:0,60,1077	0/0:16,0:16:48.16:0,48,889	0/0:30,0:30:87.30:0,87,1629	0/0:38,0:38:99:0,111,2011	0/0:43,0:43:99:0,123,2267	0/0:14,0:14:42.13:0,42,755	0/0:25,0:25:69.17:0,69,1258	0/0:15,0:15:36.12:0,36,674	1/1:0,26:26:69.23:1016,69,0	1/1:1,29:30:75.15:1103,75,0	1/1:2,30:32:84.28:1234,84,0	1/1:0,34:33:87.29:1281,87,0	0/0:29,0:29:84.27:0,84,1540	0/0:35,0:35:99:0,102,1910	0/0:32,0:32:93.32:0,93,1715	0/0:29,0:29:78.24:0,78,1390	0/0:20,0:20:57.18:0,57,1036	0/0:55,0:55:99:0,166,3071	1/1:0,28:27:75.25:1103,75,0	1/1:1,15:16:42:618,42,0	1/1:1,20:21:54.18:795,54,0	0/0:35,0:35:99:0,102,1897	0/0:29,0:29:78.27:0,78,1457	0/0:21,0:21:63.22:0,63,1180	0/0:3,0:3:9.03:0,9,168
chr10	109390859	.	CT	C	18385.49	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=-1.724;DP=574;FS=3.854;HRun=1;HaplotypeScore=66.7722;InbreedingCoeff=0.7117;MQ=34.13;MQ0=5;MQRankSum=-1.277;QD=32.89;ReadPosRankSum=0.313;VQSLOD=4.4744;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:57.19:794,57,0	1/1:0,6:6:18.06:251,18,0	./.	0/0:5,1:1:2.80:0,3,13	1/1:1,28:28:47.92:668,48,0	1/1:0,22:22:48.16:670,48,0	1/1:0,13:13:33.07:439,33,0	1/1:0,40:40:99:1630,117,0	1/1:0,29:26:63.19:880,63,0	1/1:0,20:20:57.14:796,57,0	1/1:0,12:12:15.05:209,15,0	1/1:0,20:20:51.17:710,51,0	1/1:0,24:24:57.19:795,57,0	1/1:0,25:25:63.21:879,63,0	1/1:0,25:25:63.21:879,63,0	1/1:0,22:22:57.19:796,57,0	1/1:0,22:22:51.17:711,51,0	1/1:0,17:17:36.11:500,36,0	1/1:2,20:20:54.18:754,54,0	1/1:0,20:20:51.17:712,51,0	1/1:0,18:17:36.12:503,36,0	1/1:0,20:20:48.16:670,48,0	1/1:0,18:18:48.16:668,48,0	1/1:0,18:17:39.09:519,39,0	1/1:0,23:23:54.18:754,54,0	1/1:0,29:29:87.27:1196,87,0	1/1:0,27:27:63.05:879,63,0	1/1:0,4:4:9.03:126,9,0
chr10	109394934	.	GC	G	9705.29	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.742;DP=833;FS=7.942;HRun=1;HaplotypeScore=85.6324;InbreedingCoeff=0.9937;MQ=81.54;MQ0=0;MQRankSum=-2.132;QD=38.21;ReadPosRankSum=4.553;VQSLOD=5.1543;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1866	0/0:12,0:12:36.12:0,36,575	0/0:24,0:24:69.23:0,69,1066	0/0:20,1:21:25.09:0,25,719	0/0:15,0:15:45.14:0,45,696	0/0:21,0:21:63.21:0,63,1006	0/0:39,0:39:99:0,117,1844	0/0:25,0:25:75.25:0,75,1178	0/0:32,0:32:96.33:0,96,1533	0/0:24,0:24:72.24:0,72,1127	0/0:17,0:17:48.16:0,48,764	1/1:0,46:46:99:1886,135,0	1/1:0,35:35:99:1384,99,0	1/1:0,44:44:99:1613,117,0	1/1:0,43:43:99:1552,111,0	0/0:50,0:50:99:0,150,2363	0/0:38,0:38:99:0,114,1822	0/0:32,0:32:93.32:0,93,1486	0/0:16,0:16:45.10:0,45,691	0/0:13,0:13:39.12:0,39,600	0/0:81,0:81:99:0,241,3778	1/1:0,19:19:54.18:754,54,0	1/1:0,15:15:45.15:628,45,0	1/1:1,51:52:99:1888,135,0	0/0:9,0:9:23.86:0,24,358	0/0:29,0:29:87.30:0,87,1391	0/0:38,0:38:99:0,114,1821	0/0:4,0:4:12.04:0,12,191
chr10	109395938	.	GTC	G	361.33	PASS	AB=0.963;AC=8;AF=0.143;AN=56;BaseQRankSum=3.005;DP=533;FS=7.340;HRun=0;HaplotypeScore=109.9129;InbreedingCoeff=0.1280;MQ=73.16;MQ0=7;MQRankSum=-1.199;QD=2.89;ReadPosRankSum=5.662;VQSLOD=1.0352;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:46.70:0,47,329	0/0:5,0:5:12.02:0,12,163	0/0:32,0:14:33.52:0,34,305	0/0:25,0:17:21.45:0,21,299	0/0:19,0:18:35.79:0,36,413	0/0:13,0:13:35.85:0,36,414	0/0:14,0:15:35.91:0,36,419	0/0:43,0:43:96.59:0,97,825	0/0:6,0:7:14.90:0,15,180	0/0:12,0:12:29.90:0,30,271	0/0:16,0:16:42:0,42,465	0/1:17,1:18:25.21:25,0,110	0/1:12,1:13:68.03:73,0,68	1/1:19,1:20:3.99:113,4,0	0/1:21,0:20:55.93:56,0,101	0/0:10,0:10:23.91:0,24,315	0/0:36,0:36:37.65:0,38,440	0/0:30,0:29:59.29:0,59,457	0/0:26,0:26:44.98:0,45,385	0/0:22,0:21:34.96:0,35,309	0/0:14,0:13:32.84:0,33,290	0/1:13,0:13:7.51:50,0,8	0/1:15,1:16:6.54:99,0,7	0/1:23,1:24:52.46:79,0,52	0/0:9,0:9:21.04:0,21,288	0/0:17,0:17:33.64:0,34,278	0/0:20,1:21:17.42:0,17,282	0/0:11,0:11:17.75:0,18,152
chr10	109395940	.	CT	C	2008.63	PASS	AB=0.772;AC=32;AF=0.571;AN=56;BaseQRankSum=2.585;DP=527;FS=0.000;HRun=15;HaplotypeScore=95.3524;InbreedingCoeff=0.3554;MQ=68.54;MQ0=8;MQRankSum=2.841;QD=4.95;ReadPosRankSum=2.951;VQSLOD=2.3971;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,10:25:14.46:218,14,0	0/0:4,0:4:8.99:0,9,77	0/0:29,0:11:10.70:0,11,71	0/1:23,0:15:1.93:2,0,44	0/0:19,0:20:30.45:0,30,264	0/0:12,1:13:4.62:0,5,147	0/0:15,1:16:1.73:0,2,139	0/1:23,17:44:23.70:271,0,24	0/1:7,1:7:7.25:7,0,67	0/1:10,1:11:4.34:4,0,78	0/0:13,1:16:1.88:0,2,116	0/1:11,0:20:4.21:20,0,4	1/1:6,1:12:19.02:65,19,0	1/1:4,0:18:20.37:58,20,0	1/1:7,0:19:22.39:64,22,0	0/0:11,1:12:1.72:0,2,131	1/1:23,7:33:24.81:306,25,0	0/1:18,10:30:15.16:176,0,15	1/1:13,12:26:18.52:230,19,0	0/1:10,9:20:1.66:102,0,2	1/1:9,4:12:11.52:71,12,0	1/1:2,0:11:9.88:31,10,0	1/1:4,0:16:24.84:82,25,0	1/1:5,0:24:31.01:101,31,0	0/0:10,0:10:14.94:0,15,123	1/1:9,7:17:2.23:132,2,0	1/1:8,12:21:33.89:218,34,0	0/1:5,6:11:19.43:28,0,19
chr10	109397243	.	C	CCTAT	36978	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-7.213;DP=673;FS=1.319;HRun=0;HaplotypeScore=121.0704;InbreedingCoeff=0.9863;MQ=69.02;MQ0=0;MQRankSum=-6.930;QD=64.76;ReadPosRankSum=1.494;VQSLOD=7.0930;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,18:26:69.24:1898,69,0	0/0:6,0:6:15.05:0,15,300	0/0:11,0:11:33.10:0,33,609	0/0:14,0:14:39.08:0,39,675	1/1:4,10:14:21.07:587,21,0	1/1:7,19:27:63.17:1691,63,0	1/1:4,20:26:69.24:1923,69,0	1/1:17,15:34:96.30:2447,96,0	1/1:2,24:28:66.23:1844,66,0	0/0:21,0:21:63.22:0,63,1251	0/0:13,0:13:30.06:0,30,544	1/1:3,27:32:87.30:2408,87,0	1/1:3,19:26:63.22:1740,63,0	1/1:3,27:32:75.73:2086,76,0	1/1:4,31:38:96.33:2680,96,0	0/0:37,0:37:99:0,111,2149	1/1:1,26:27:72.25:2014,72,0	1/1:4,29:38:84.29:2333,84,0	1/1:10,16:29:84.27:2112,84,0	1/1:4,10:16:30.10:838,30,0	1/1:7,28:39:66.20:1810,66,0	1/1:1,9:11:21.07:588,21,0	1/1:2,6:9:12.04:334,12,0	1/1:8,30:38:81.28:2249,81,0	1/1:1,13:15:36.12:1007,36,0	1/1:7,19:29:21.36:1988,21,0	1/1:6,16:26:69.24:1899,69,0	1/1:1,6:10:18.06:503,18,0
chr10	109397582	.	AGCCTTTGCCTTTTATGATTCCTATTTTTTTAAGCCTCCCAAGCT	A	8782.09	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=8.074;DP=608;FS=4.979;HRun=0;HaplotypeScore=615.5080;InbreedingCoeff=0.9529;MQ=87.46;MQ0=0;MQRankSum=-8.337;QD=96.51;ReadPosRankSum=5.832;VQSLOD=0.5746;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,18797	0/0:8,0:8:24.08:0,24,3650	0/0:28,0:28:84.19:0,84,5178	0/0:20,0:20:54.18:0,54,3085	0/0:30,0:30:90.31:0,90,11186	0/0:26,0:26:78.27:0,78,13223	0/0:37,0:37:99:0,105,12928	0/0:32,0:32:93.32:0,93,7471	0/0:21,0:21:63.22:0,63,9578	0/0:26,0:26:78.27:0,78,12071	0/0:15,0:15:42.14:0,42,5818	1/1:10,10:20:17.93:2026,18,0	1/1:6,10:16:27.09:3039,27,0	1/1:12,8:20:12.04:1351,12,0	1/1:9,9:18:18.06:2026,18,0	0/0:27,0:27:81.28:0,81,13481	0/0:35,0:35:99:0,105,16148	0/0:16,0:16:48.16:0,48,7942	0/0:21,0:21:57.17:0,57,5388	0/0:12,0:12:29.87:0,30,4181	0/0:29,0:29:87.30:0,87,13441	./.	./.	1/1:10,7:17:4.26:341,4,0	0/0:19,0:19:57.20:0,57,6911	0/0:24,0:24:72.25:0,72,10671	0/0:22,0:22:66.23:0,66,11019	0/0:20,0:20:57.20:0,57,7846
chr10	109397860	.	GTGGT	G	1907.11	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=1.770;DP=477;FS=9.547;HRun=0;HaplotypeScore=114.9506;InbreedingCoeff=0.9469;MQ=66.86;MQ0=4;MQRankSum=-3.596;QD=21.67;ReadPosRankSum=5.829;VQSLOD=2.6551;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:14.90:0,15,139	0/0:11,0:11:27.09:0,27,605	0/0:42,0:37:54.14:0,54,1030	0/0:31,0:20:36.08:0,36,688	0/0:20,0:20:36:0,36,594	0/0:17,0:17:22.88:0,23,200	0/0:7,0:7:8.99:0,9,113	0/0:28,0:26:41.36:0,41,504	0/0:10,0:10:16.43:0,16,222	0/0:15,0:15:42.14:0,42,936	0/0:19,0:19:39.11:0,39,815	1/1:0,8:7:18.06:295,18,0	1/1:4,11:15:29.97:490,30,0	1/1:6,9:15:18.06:294,18,0	1/1:11,10:21:36.12:573,36,0	0/0:13,0:13:27:0,27,439	0/0:16,0:20:32.90:0,33,372	0/0:13,0:19:41.89:0,42,552	0/0:25,0:28:66.09:0,66,942	0/0:6,0:7:18.06:0,18,269	0/0:20,0:20:24.08:0,24,346	1/1:1,6:8:9.03:147,9,0	1/1:6,6:12:9.46:149,9,0	1/1:4,5:9:9.03:148,9,0	0/0:16,0:16:32.33:0,32,368	0/0:10,0:13:30.06:0,30,469	0/0:21,0:25:62.99:0,63,815	0/0:6,0:14:36.07:0,36,515
chr10	109397893	.	GTTTTTTGTT	G	1792.05	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=2.290;DP=378;FS=1.623;HRun=0;HaplotypeScore=126.6274;InbreedingCoeff=0.4102;MQ=55.63;MQ0=14;MQRankSum=-6.061;QD=18.47;ReadPosRankSum=4.528;VQSLOD=2.4505;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:14.95:0,15,289	0/0:9,0:9:21.07:0,21,939	0/0:30,0:11:18.46:0,18,186	0/0:44,0:17:16.03:0,16,258	1/1:3,10:15:21.04:446,21,0	1/1:1,10:11:18.06:522,18,0	1/1:2,0:2:5.96:45,6,0	0/0:23,0:18:38.61:0,39,1136	1/1:1,5:6:6.02:174,6,0	0/0:14,0:14:30.97:0,31,1018	0/0:11,0:10:24.08:0,24,798	0/1:7,0:6:8.90:9,0,56	0/1:10,0:10:24.26:24,0,99	0/1:7,0:7:18.16:18,0,87	0/1:17,0:17:74.49:74,0,76	0/0:5,0:5:12.04:0,12,269	0/0:23,0:21:46.26:0,46,1268	0/0:21,0:21:52.89:0,53,1487	0/0:25,0:24:44.55:0,45,1283	0/0:7,0:7:20.93:0,21,487	0/0:5,0:5:12:0,12,170	0/1:6,0:6:31.39:31,0,42	0/1:5,0:5:19.52:20,0,53	0/0:3,0:3:6.01:0,6,64	1/1:1,10:11:21.07:608,21,0	0/0:12,0:13:32.59:0,33,981	0/0:18,0:18:41.05:0,41,1088	0/0:15,0:15:33.06:0,33,945
chr10	109397900	.	GTTTTTTT	G	2080.94	PASS	AC=22;AF=0.407;AN=54;BaseQRankSum=4.201;DP=345;FS=0.726;HRun=13;HaplotypeScore=100.6856;InbreedingCoeff=0.8765;MQ=55.73;MQ0=19;MQRankSum=-3.815;QD=22.87;ReadPosRankSum=2.592;VQSLOD=0.7424;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:14.72:0,15,269	0/0:7,0:7:21.07:0,21,800	0/0:29,0:9:14.38:0,14,105	0/0:37,0:10:18.15:0,18,213	1/1:12,0:12:18.03:212,18,0	1/1:11,0:10:18.06:255,18,0	./.	0/0:23,0:18:42.86:0,43,960	1/1:5,0:5:6.02:85,6,0	0/0:11,0:12:32.97:0,33,886	0/0:11,0:9:21.07:0,21,590	1/1:6,2:7:11.92:162,12,0	1/1:3,4:7:12.02:252,12,0	1/1:5,3:8:11.59:211,12,0	1/1:4,12:16:21.04:459,21,0	0/0:4,0:4:6.01:0,6,144	0/0:23,0:21:36.10:0,36,1044	0/0:23,0:23:45.01:0,45,1181	0/0:19,0:17:39.13:0,39,1003	0/0:9,0:8:18.04:0,18,346	0/0:5,0:5:6.02:0,6,124	1/1:2,3:5:9.01:197,9,0	1/1:2,2:4:6:132,6,0	1/1:4,0:4:2.98:25,3,0	1/1:11,0:11:21.07:297,21,0	0/0:12,0:12:33.10:0,33,785	0/0:15,0:15:27.09:0,27,763	0/0:13,0:12:27.08:0,27,690
chr10	109397913	.	T	TTA	3587.48	PASS	AB=0.795;AC=20;AF=0.370;AN=54;BaseQRankSum=-6.451;DP=281;FS=9.262;HRun=0;HaplotypeScore=53.4783;InbreedingCoeff=0.7222;MQ=55.15;MQ0=22;MQRankSum=-0.219;QD=22.71;ReadPosRankSum=0.242;VQSLOD=3.3202;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,6:9:12.04:202,12,0	0/0:7,0:7:21.07:0,21,271	0/0:14,0:4:5.03:0,5,57	0/1:26,0:7:2.67:3,0,45	0/0:10,0:9:13.02:0,13,89	0/0:13,0:12:20.98:0,21,182	0/0:1,0:1:2.98:0,3,21	1/1:11,17:20:30.39:517,30,0	0/0:5,0:5:5.90:0,6,43	0/0:10,0:10:2.28:0,2,279	0/0:9,0:8:14.83:0,15,152	0/0:8,0:8:14.88:0,15,119	0/0:4,0:4:8.94:0,9,65	0/0:6,0:5:8.68:0,9,62	0/0:12,0:12:20.85:0,21,147	0/0:3,0:3:8.96:0,9,95	0/1:7,15:18:1.60:446,0,2	1/1:1,15:18:14.69:569,15,0	1/1:3,12:13:33.57:523,34,0	1/1:0,8:7:15.05:256,15,0	1/1:2,1:2:3.01:51,3,0	0/0:3,0:3:8.53:0,9,50	0/0:3,0:3:8.92:0,9,62	./.	0/0:12,0:12:23.85:0,24,198	1/1:0,7:8:23.99:353,24,0	1/1:0,7:7:21.07:360,21,0	1/1:2,7:8:18.06:308,18,0
chr10	109400495	.	C	CG	19112.98	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-12.148;DP=625;FS=0.000;HRun=3;HaplotypeScore=54.1209;InbreedingCoeff=0.9990;MQ=80.93;MQ0=0;MQRankSum=-4.244;QD=36.90;ReadPosRankSum=4.023;VQSLOD=5.1218;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:38:99:1427,102,0	0/0:11,0:11:33.10:0,33,395	0/0:18,0:18:45.13:0,45,532	0/0:19,0:19:46.53:0,47,546	1/1:0,21:21:63.21:881,63,0	1/1:1,23:24:63.21:881,63,0	1/1:2,20:22:54.18:756,54,0	1/1:3,20:23:60.20:839,60,0	1/1:1,14:15:39.13:546,39,0	0/0:18,0:18:48.15:0,48,575	0/0:16,0:16:45.14:0,45,540	1/1:2,21:23:60.20:839,60,0	1/1:0,25:25:75.25:1044,75,0	1/1:1,20:21:54.18:756,54,0	1/1:0,31:30:87.29:1217,87,0	0/0:25,0:25:63.19:0,63,755	1/1:1,28:29:81.24:1113,81,0	1/1:1,25:26:69.23:965,69,0	1/1:3,25:28:75.17:987,75,0	1/1:1,11:12:33.11:462,33,0	1/1:5,31:36:81.27:1129,81,0	1/1:1,15:16:36.12:502,36,0	1/1:0,18:18:54.18:756,54,0	1/1:0,31:31:81.27:1133,81,0	1/1:3,24:27:69.22:943,69,0	1/1:1,26:27:75.22:1014,75,0	1/1:0,15:15:45.15:628,45,0	1/1:1,8:9:21.07:294,21,0
chr10	109402651	.	CTG	C	83.97	PASS	AB=0.972;AC=17;AF=0.315;AN=54;BaseQRankSum=2.928;DP=730;FS=1.153;HRun=0;HaplotypeScore=135.8321;InbreedingCoeff=0.0877;MQ=63.62;MQ0=32;MQRankSum=-0.410;QD=0.31;ReadPosRankSum=0.593;VQSLOD=2.7301;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:46,0:39:0:0,0,0	1/1:13,0:13:0.37:1,0,0	0/0:43,0:29:0:0,0,0	./.	0/0:18,0:15:5.36:0,5,32	0/0:24,0:22:0:0,0,0	0/0:41,0:37:5.79:0,6,35	0/0:36,0:30:10.54:0,11,40	0/0:13,0:13:5.41:0,5,39	0/0:28,0:27:3.28:0,3,174	0/1:11,0:11:4.55:5,0,28	0/0:26,0:23:8.05:0,8,44	0/0:26,0:24:0.84:0,1,18	1/1:29,0:27:0.87:3,1,0	0/0:27,0:27:2.48:0,2,34	0/1:17,4:21:23.08:23,0,50	0/0:23,0:22:2.97:0,3,20	0/1:24,1:24:15.21:69,0,15	0/1:27,0:26:0.46:0,0,32	1/1:6,0:6:0.89:2,1,0	0/0:49,0:40:3.40:0,3,18	0/0:20,0:18:5.99:0,6,50	0/0:15,0:12:4.24:0,4,27	0/0:26,0:26:3.46:0,3,25	1/1:18,0:17:1.25:3,1,0	0/1:40,0:37:22.62:23,0,80	1/1:15,0:13:7.31:58,7,0	0/1:22,0:20:9.70:12,0,10
chr10	109402663	.	G	GTA	4031.37	PASS	AB=0.971;AC=27;AF=0.482;AN=56;BaseQRankSum=-0.471;DP=794;FS=7.727;HRun=0;HaplotypeScore=129.0436;InbreedingCoeff=0.6558;MQ=47.07;MQ0=78;MQRankSum=-1.433;QD=8.71;ReadPosRankSum=3.388;VQSLOD=2.8750;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:43,2:37:32.12:208,32,0	0/0:15,0:13:26.87:0,27,207	0/0:38,0:24:56.15:0,56,566	0/0:32,0:17:32.31:0,32,370	1/1:19,0:14:23.76:211,24,0	1/1:30,2:29:23.73:198,24,0	1/1:48,0:40:38.60:346,39,0	0/1:44,0:38:99:312,0,157	1/1:20,0:20:29.94:295,30,0	0/0:27,0:23:66.41:0,66,595	0/0:14,0:10:23.93:0,24,205	0/0:35,0:28:28.97:0,29,213	0/0:33,0:29:34.05:0,34,295	0/0:30,0:26:38.67:0,39,302	0/0:33,0:28:37.92:0,38,293	0/1:23,0:20:24.36:24,0,216	1/1:27,0:21:23.72:241,24,0	1/1:25,2:24:43.61:470,44,0	0/1:25,1:25:14.96:355,0,15	1/1:8,0:8:5.98:60,6,0	1/1:53,0:39:40.44:337,40,0	0/0:27,0:24:26.75:0,27,207	0/0:18,0:15:17.92:0,18,140	0/0:29,0:25:32.79:0,33,260	0/1:17,1:15:4.75:40,0,5	0/1:33,2:30:7.70:433,0,8	1/1:16,1:13:26.76:193,27,0	1/1:21,0:16:38.38:309,38,0
chr10	109402699	.	GTGTC	G	1541.48	PASS	AB=0.996;AC=39;AF=0.750;AN=52;BaseQRankSum=3.027;DP=716;FS=6.828;HRun=0;HaplotypeScore=134.3213;InbreedingCoeff=0.1306;MQ=29.81;MQ0=117;MQRankSum=-2.678;QD=2.32;ReadPosRankSum=-1.970;VQSLOD=1.8098;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:28:2.73:29,3,0	0/1:14,0:11:1.54:2,0,94	./.	./.	1/1:19,0:12:2.88:15,3,0	1/1:27,0:25:1.36:2,1,0	1/1:51,0:37:10.98:63,11,0	1/1:30,0:25:13.34:45,13,0	1/1:27,0:26:10.63:58,11,0	0/0:31,0:21:23.23:0,23,495	0/1:12,0:7:0.42:0,0,81	1/1:36,0:24:7.77:83,8,0	0/1:27,0:21:27.67:46,0,28	0/1:32,0:24:8.90:42,0,9	0/1:34,0:28:18.44:39,0,18	0/0:20,0:16:15.12:0,15,214	0/1:28,0:20:11.69:12,0,29	0/1:23,1:19:11.83:191,0,12	1/1:24,1:18:16.28:187,16,0	1/1:11,0:11:3.01:48,3,0	1/1:59,0:37:5.03:29,5,0	0/1:24,0:18:0:0,0,0	1/1:13,0:9:2.63:21,3,0	0/1:32,0:24:8.02:38,0,8	1/1:20,0:15:3.01:36,3,0	1/1:36,4:30:28.58:450,29,0	1/1:22,0:18:29.44:228,29,0	1/1:15,0:9:5.16:25,5,0
chr10	109402701	.	GTC	G	1506.91	PASS	AB=0.987;AC=40;AF=0.769;AN=52;BaseQRankSum=5.744;DP=708;FS=24.976;HRun=0;HaplotypeScore=123.5918;InbreedingCoeff=0.0192;MQ=29.78;MQ0=116;MQRankSum=-1.004;QD=2.29;ReadPosRankSum=0.890;VQSLOD=0.9400;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,2:26:2.79:19,3,0	0/1:15,0:12:0.62:1,0,115	./.	./.	1/1:18,0:11:2.90:16,3,0	1/1:27,0:25:4.24:28,4,0	1/1:49,0:35:13.87:78,14,0	0/0:29,0:24:14.17:0,14,99	1/1:26,0:25:10.82:60,11,0	0/1:33,0:23:0.98:1,0,449	0/1:12,0:7:32.59:33,0,47	1/1:35,0:23:7.79:77,8,0	1/1:25,1:20:0.94:102,1,0	0/1:32,0:24:8.84:50,0,9	0/1:32,1:27:10.73:75,0,11	0/0:20,0:16:2.31:0,2,153	0/1:27,1:20:14.83:15,0,28	1/1:22,3:19:5.67:216,6,0	0/1:22,1:17:10.56:130,0,11	1/1:10,1:11:2.90:16,3,0	1/1:57,1:36:4.81:28,5,0	1/1:25,0:19:3:25,3,0	1/1:12,1:9:2.78:21,3,0	0/1:32,0:24:4.24:59,0,4	1/1:19,1:15:3:27,3,0	1/1:40,1:31:4.32:290,4,0	1/1:19,3:18:29.56:230,30,0	1/1:13,2:9:5.05:49,5,0
chr10	109402709	.	GTC	G	977.34	PASS	AB=0.997;AC=28;AF=0.583;AN=48;BaseQRankSum=4.998;DP=717;FS=2.095;HRun=0;HaplotypeScore=126.4157;InbreedingCoeff=-0.0521;MQ=28.89;MQ0=121;MQRankSum=-1.533;QD=1.97;ReadPosRankSum=2.031;VQSLOD=2.1624;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,2:23:0:0,0,0	0/0:16,0:12:0.69:0,1,319	./.	./.	1/1:16,0:9:2.88:15,3,0	./.	1/1:51,2:37:2.21:30,2,0	1/1:13,0:5:5.88:36,6,0	1/1:25,1:25:7.97:60,8,0	0/0:39,0:27:26.07:0,26,1003	0/1:11,0:7:45.86:67,0,46	1/1:36,0:24:11.24:60,11,0	0/1:27,0:21:22.18:121,0,22	0/1:31,0:23:8.13:42,0,8	0/1:36,0:31:0.05:54,0,0	0/0:24,0:20:28.01:0,28,492	0/1:27,1:20:18.01:18,0,106	0/1:28,0:23:65.98:165,0,66	0/1:20,0:16:40.42:72,0,40	0/0:11,1:11:0:0,0,0	./.	0/1:24,0:17:0:0,0,0	1/1:15,1:11:2.80:24,3,0	1/1:35,0:27:5.78:44,6,0	1/1:20,0:15:3:26,3,0	0/1:40,0:29:77.40:148,0,77	0/1:22,0:18:58.13:86,0,58	1/1:14,0:8:3.48:44,3,0
chr10	109402711	.	CTG	C	214.19	PASS	AB=0.986;AC=15;AF=0.341;AN=44;BaseQRankSum=4.804;DP=714;FS=0.000;HRun=0;HaplotypeScore=132.8086;InbreedingCoeff=-0.1973;MQ=28.61;MQ0=120;MQRankSum=-3.549;QD=0.52;ReadPosRankSum=3.679;VQSLOD=1.9094;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:25:0.17:0,0,0	0/0:16,0:12:16.46:0,16,330	./.	./.	./.	./.	0/0:52,0:37:5.70:0,6,33	./.	0/1:28,0:27:8.75:14,0,9	0/0:37,0:25:60.19:0,60,989	0/1:10,1:8:38.48:38,0,64	0/1:35,1:24:9.17:9,0,24	0/1:27,0:20:8.11:8,0,29	0/0:29,0:21:2.17:0,2,8	0/0:38,1:32:2.56:0,3,33	0/0:23,0:19:38.95:0,39,636	0/0:31,0:23:6.81:0,7,134	0/1:28,1:24:89.23:89,0,129	0/1:18,0:15:27.01:27,0,112	./.	0/1:67,1:42:0:0,0,0	0/1:23,0:16:0:0,0,0	0/0:15,0:10:0:0,0,0	0/1:34,1:27:18.94:34,0,19	1/1:19,1:15:0.45:1,0,0	0/1:39,0:28:44.72:45,0,181	0/1:22,0:18:51.12:51,0,134	0/1:14,0:8:11.64:12,0,12
chr10	109402715	.	GTGTGTC	G	798.22	PASS	AB=1.000;AC=19;AF=0.396;AN=48;BaseQRankSum=5.637;DP=704;FS=2.257;HRun=0;HaplotypeScore=153.7646;InbreedingCoeff=-0.0024;MQ=28.78;MQ0=115;MQRankSum=-5.193;QD=1.81;ReadPosRankSum=1.280;VQSLOD=2.8084;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:26:0.42:0,0,1	0/0:17,0:13:11.13:0,11,641	./.	./.	0/0:14,1:9:0:0,0,0	0/0:26,1:25:0:0,0,0	1/1:51,0:36:2.91:17,3,0	./.	1/1:25,3:27:11.01:61,11,0	0/0:37,0:25:72.24:0,72,1661	0/0:11,0:7:9.24:0,9,166	0/1:34,0:23:9.69:48,0,10	0/1:27,0:20:55.82:77,0,56	0/1:30,0:22:10.95:11,0,27	0/0:36,0:29:0.72:0,1,2	0/0:24,0:20:21.24:0,21,1026	0/1:28,0:20:22.84:23,0,186	0/1:28,0:23:71.02:167,0,71	0/1:17,0:14:1.75:163,0,2	./.	1/1:65,0:40:0.47:1,0,0	0/0:22,0:16:0:0,0,0	0/0:15,0:10:0.47:0,0,1	0/1:36,0:28:19.35:34,0,19	1/1:19,2:16:2.90:16,3,0	0/1:38,0:27:78.74:254,0,79	0/1:23,0:19:18.93:47,0,19	1/1:14,0:9:1.74:5,2,0
chr10	109402719	.	GTC	G	948.66	PASS	AB=0.906;AC=25;AF=0.543;AN=46;BaseQRankSum=6.415;DP=699;FS=3.866;HRun=0;HaplotypeScore=139.8505;InbreedingCoeff=-0.0483;MQ=29.45;MQ0=113;MQRankSum=-4.210;QD=1.66;ReadPosRankSum=-0.975;VQSLOD=2.5451;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,7:23:0.33:0,0,0	0/1:17,0:13:2.04:2,0,390	./.	./.	0/1:14,0:8:0:0,0,0	./.	0/1:46,3:35:4.92:5,0,9	./.	1/1:31,0:30:11.03:74,11,0	0/0:39,0:26:74:0,74,1119	0/1:11,0:7:33.98:34,0,93	0/1:28,2:21:1.61:64,0,2	0/1:23,3:19:18.29:136,0,18	1/1:27,3:22:0.84:53,1,0	0/1:35,4:32:0.53:37,0,1	0/0:25,0:21:23.73:0,24,712	0/1:22,4:19:8.39:8,0,125	0/1:22,5:22:38.50:175,0,39	0/1:14,4:14:1:141,0,1	./.	0/1:60,4:39:0:0,0,0	0/1:20,3:18:0:0,0,0	0/0:14,1:10:0:0,0,0	1/1:34,3:29:4.88:54,5,0	1/1:20,1:16:2.98:25,3,0	0/1:28,7:24:73.92:197,0,74	0/1:20,3:19:45.50:58,0,45	1/1:14,0:9:1.24:3,1,0
chr10	109402723	.	GTGTGTC	G	1473.95	PASS	AB=0.954;AC=21;AF=0.420;AN=50;BaseQRankSum=5.109;DP=715;FS=3.124;HRun=0;HaplotypeScore=151.0918;InbreedingCoeff=0.0758;MQ=30.06;MQ0=113;MQRankSum=-5.152;QD=2.97;ReadPosRankSum=-1.509;VQSLOD=2.6015;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:23:0.42:0,0,1	0/0:17,0:13:10.20:0,10,736	./.	./.	0/0:13,1:9:0:0,0,0	0/0:24,5:27:0:0,0,0	1/1:40,9:36:0.40:1,0,0	1/1:14,0:3:6.91:80,7,0	0/1:25,5:29:0.97:55,0,1	0/0:42,0:29:75.04:0,75,1817	0/0:13,0:9:11.82:0,12,233	1/1:28,2:22:8.60:185,9,0	0/1:25,2:20:56.82:186,0,57	0/1:30,2:24:4.84:101,0,5	1/1:33,5:31:4.45:50,4,0	0/0:26,0:22:44.79:0,45,1285	0/1:26,0:19:39.08:39,0,182	0/1:27,0:22:87.32:167,0,87	0/1:19,0:15:16.68:205,0,17	./.	1/1:65,1:40:0.47:1,0,0	0/1:20,3:19:0:0,0,0	0/0:16,0:11:0.47:0,0,1	0/1:35,3:30:0.54:28,0,1	0/1:20,1:16:0.03:0,0,0	0/1:34,0:23:66.96:425,0,67	0/1:23,0:19:22.42:73,0,22	0/0:14,0:9:0.13:0,0,1
chr10	109402725	.	GTGTC	G	2039.01	PASS	AB=0.975;AC=24;AF=0.480;AN=50;BaseQRankSum=7.485;DP=715;FS=4.722;HRun=0;HaplotypeScore=142.7847;InbreedingCoeff=0.1576;MQ=30.05;MQ0=113;MQRankSum=-6.921;QD=4.00;ReadPosRankSum=-0.222;VQSLOD=2.3997;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:25:0.47:0,0,1	0/0:17,0:13:1.15:0,1,624	./.	./.	0/0:10,4:9:0:0,0,0	0/0:12,17:27:0:0,0,0	1/1:47,0:34:5.40:42,5,0	0/1:18,0:7:8.45:8,0,91	1/1:14,16:29:4.02:68,4,0	0/0:42,0:29:78.08:0,78,1628	0/0:14,0:10:14.69:0,15,245	1/1:30,0:22:13.12:128,13,0	0/1:23,0:16:62.21:127,0,62	0/1:32,0:24:5.05:115,0,5	1/1:36,1:30:3.24:56,3,0	0/0:24,0:20:44.58:0,45,1081	0/1:26,0:19:92.12:92,0,132	0/1:26,2:23:54.71:357,0,55	1/1:19,0:15:37.59:409,38,0	./.	0/1:66,2:42:0:0,0,0	0/1:23,0:19:0.07:0,0,0	0/0:15,1:11:0:0,0,0	0/1:37,0:29:8.57:32,0,9	0/1:18,3:16:0:0,0,0	0/1:34,1:24:47.09:440,0,47	1/1:21,2:19:27.76:227,28,0	1/1:12,1:8:6.02:72,6,0
chr10	109402727	.	GTC	G	997.10	PASS	AB=0.961;AC=27;AF=0.563;AN=48;BaseQRankSum=5.777;DP=711;FS=0.585;HRun=0;HaplotypeScore=138.4315;InbreedingCoeff=0.0089;MQ=29.96;MQ0=112;MQRankSum=-5.533;QD=1.73;ReadPosRankSum=-1.516;VQSLOD=2.4535;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,4:25:0.33:0,0,0	0/0:17,0:13:1.29:0,1,446	./.	./.	0/1:14,0:9:0:0,0,0	./.	1/1:45,0:32:5.53:42,6,0	0/1:20,0:9:34.02:34,0,64	1/1:29,0:29:5.78:73,6,0	0/0:41,0:28:77.99:0,78,1280	0/0:14,0:10:14.70:0,15,199	1/1:29,0:21:0.38:83,0,0	0/1:22,0:15:61.98:75,0,62	0/1:32,1:25:8.69:56,0,9	1/1:36,0:29:4.13:19,4,0	0/0:24,0:20:44.79:0,45,788	0/1:24,3:20:8.35:8,0,135	0/1:26,2:23:66.42:198,0,66	1/1:16,3:15:2.88:169,3,0	./.	0/1:64,3:42:0:0,0,0	0/1:23,0:19:0:0,0,0	0/1:17,0:12:0:0,0,0	0/1:36,0:28:10.06:29,0,10	1/1:22,0:17:5.97:48,6,0	0/1:32,5:26:99:219,0,115	0/1:20,1:17:49.81:68,0,50	1/1:13,0:8:2.03:5,2,0
chr10	109402729	.	C	CTG	1099.20	PASS	AB=0.988;AC=24;AF=0.462;AN=52;BaseQRankSum=4.454;DP=736;FS=4.064;HRun=0;HaplotypeScore=148.8897;InbreedingCoeff=0.1288;MQ=30.60;MQ0=111;MQRankSum=-5.879;QD=1.91;ReadPosRankSum=-3.900;VQSLOD=1.4081;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:28:0.12:0,0,0	0/0:17,0:13:23.41:0,23,317	./.	./.	0/1:13,0:8:0:0,0,0	0/1:29,0:27:0:0,0,0	0/1:45,0:32:0:0,0,0	1/1:35,0:23:35.85:238,36,0	0/1:29,0:29:0.87:1,0,11	0/0:39,0:26:66.21:0,66,855	0/0:14,0:10:12.04:0,12,154	1/1:27,3:22:14.53:158,15,0	0/1:21,1:15:28.45:110,0,28	1/1:31,2:25:8.34:76,8,0	1/1:32,2:27:2.57:30,3,0	0/0:24,0:20:42.14:0,42,546	0/1:27,0:21:28.70:29,0,102	0/1:28,0:23:34.15:34,0,82	0/1:20,0:16:21.13:155,0,21	0/0:13,0:12:0:0,0,0	0/1:67,0:45:0:0,0,0	0/1:23,0:19:0.02:0,0,0	0/1:17,0:12:0:0,0,0	0/1:34,4:30:7.94:27,0,8	1/1:23,0:18:2.99:24,3,0	0/1:38,0:27:87.04:309,0,87	0/1:21,0:17:39:39,0,60	0/0:14,0:9:0.21:0,0,1
chr10	109402739	.	CTG	C	586.17	PASS	AB=0.876;AC=14;AF=0.280;AN=50;BaseQRankSum=0.954;DP=752;FS=8.772;HRun=0;HaplotypeScore=148.7973;InbreedingCoeff=0.2489;MQ=32.06;MQ0=100;MQRankSum=-3.350;QD=1.81;ReadPosRankSum=-0.620;VQSLOD=1.8823;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:29:8.26:0,8,142	0/0:18,0:14:30.08:0,30,466	./.	./.	0/0:12,2:9:5.99:0,6,71	./.	0/0:36,1:27:15.05:0,15,224	0/1:46,6:40:99:136,0,888	0/1:28,2:30:28.25:28,0,103	0/0:38,0:25:69.22:0,69,1092	0/0:14,0:10:12.04:0,12,197	0/1:25,7:24:0.52:64,0,1	0/1:16,6:15:13.38:260,0,13	1/1:22,9:23:11.49:108,11,0	1/1:26,7:26:2.55:34,3,0	0/0:23,0:19:50.98:0,51,812	0/0:32,1:30:14.96:0,15,456	0/0:26,0:21:5.36:0,5,396	0/1:29,3:19:54.41:54,0,453	0/0:15,0:14:0.95:0,1,3	0/0:73,0:49:9.01:0,9,147	0/1:17,5:19:0.07:0,0,0	0/1:13,3:13:0.19:0,0,0	1/1:30,7:31:2.78:32,3,0	0/0:22,0:17:12.03:0,12,167	0/0:37,0:27:59.85:0,60,621	0/1:17,0:14:4.82:5,0,315	0/0:13,0:10:12.04:0,12,181
chr10	109402741	.	G	GTC	493.36	PASS	AB=0.938;AC=14;AF=0.269;AN=52;BaseQRankSum=1.490;DP=774;FS=10.434;HRun=0;HaplotypeScore=165.9630;InbreedingCoeff=0.4240;MQ=32.55;MQ0=97;MQRankSum=-3.284;QD=1.55;ReadPosRankSum=-1.104;VQSLOD=1.7207;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:30:8.30:0,8,136	0/0:18,0:14:29.81:0,30,436	./.	./.	0/0:14,0:9:5.18:0,5,51	0/1:26,0:24:0:0,0,0	0/0:39,0:29:14.99:0,15,223	0/1:57,0:44:31.74:32,0,1011	0/0:31,0:31:16.46:0,16,153	0/0:36,0:26:69.22:0,69,1011	0/0:14,0:10:15.03:0,15,200	1/1:24,7:25:4.97:103,5,0	0/1:21,1:15:29.93:168,0,30	1/1:29,3:24:14.73:190,15,0	1/1:27,7:27:2.58:55,3,0	0/0:24,0:20:36.33:0,36,728	0/0:34,0:30:33.17:0,33,459	0/0:26,0:22:32:0,32,402	0/1:34,0:21:26.87:27,0,363	0/0:14,0:13:1.28:0,1,2	0/0:72,1:50:9.03:0,9,138	0/1:18,7:22:0.05:1,0,0	0/1:14,2:13:0:0,0,0	1/1:26,14:35:2.52:56,3,0	0/0:21,0:16:11.98:0,12,161	0/0:38,0:28:62.39:0,62,591	0/0:17,0:14:13.18:0,13,275	0/0:13,0:10:12.04:0,12,157
chr10	109402777	.	GTGTC	G	4302.56	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=9.383;DP=757;FS=11.528;HRun=0;HaplotypeScore=182.6262;InbreedingCoeff=0.9681;MQ=55.58;MQ0=14;MQRankSum=-3.063;QD=13.92;ReadPosRankSum=2.191;VQSLOD=3.5178;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,32:41:16.86:319,17,0	0/0:9,0:9:24.08:0,24,619	0/0:29,0:21:57.15:0,57,976	0/0:25,0:21:47.76:0,48,951	0/0:16,0:16:36.06:0,36,673	0/0:27,0:27:24.01:0,24,435	0/0:39,0:36:45.11:0,45,950	1/1:39,8:44:15.11:427,15,0	0/0:29,0:29:36:0,36,742	0/0:27,0:26:66.21:0,66,1556	0/0:11,0:11:23.87:0,24,511	0/0:29,0:27:27.02:0,27,514	0/0:24,0:23:59.18:0,59,1092	0/0:29,0:25:29.98:0,30,628	0/0:29,0:27:26.97:0,27,559	0/0:33,0:30:78.24:0,78,1855	1/1:12,25:35:30.10:509,30,0	1/1:10,15:22:30.10:532,30,0	1/1:13,17:26:50.27:630,50,0	1/1:6,10:15:8.95:124,9,0	1/1:32,25:47:26.83:480,27,0	0/0:24,0:24:6.83:0,7,505	0/0:13,0:13:15.52:0,16,301	0/0:37,0:35:29.68:0,30,755	0/0:18,0:16:27.08:0,27,616	1/1:14,19:31:53.29:742,53,0	1/1:8,6:14:20.84:281,21,0	1/1:4,4:8:18.01:258,18,0
chr10	109404713	.	GTGCAGA	G	3871.98	PASS	AB=0.541;AC=9;AF=0.161;AN=56;BaseQRankSum=12.809;DP=703;FS=34.575;HRun=0;HaplotypeScore=195.0797;InbreedingCoeff=0.8647;MQ=85.74;MQ0=0;MQRankSum=-12.456;QD=44.00;ReadPosRankSum=-0.845;VQSLOD=1.9785;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,157,5298	0/0:13,0:13:39.13:0,39,1357	0/0:27,0:27:78.27:0,78,2556	0/0:23,0:23:63.09:0,63,1987	1/1:2,10:12:17.38:288,17,0	1/1:5,9:14:30.08:613,30,0	1/1:6,22:28:63.20:1275,63,0	0/0:24,0:24:72.25:0,72,2356	0/1:3,17:20:55.82:1045,0,56	0/0:25,0:25:69.23:0,69,2267	0/0:14,0:14:42.14:0,42,1497	0/0:26,0:26:78.25:0,78,2598	0/0:32,0:32:93.32:0,93,3301	0/0:28,0:28:81.28:0,81,2853	0/0:37,0:37:99:0,108,3708	0/0:31,0:31:84.29:0,84,2893	0/0:24,0:24:72.25:0,72,2445	0/0:14,0:14:36.12:0,36,1212	0/0:20,0:20:60.21:0,60,1872	0/0:18,0:18:42.13:0,42,1302	0/0:67,0:67:99:0,196,6814	0/0:26,0:26:69.22:0,69,2327	0/0:14,0:14:36.12:0,36,1243	0/0:35,0:35:96.31:0,96,3175	1/1:3,11:14:36.10:650,36,0	0/0:32,0:32:87.30:0,87,2902	0/0:19,0:19:54.17:0,54,1832	0/0:13,0:13:36.10:0,36,1163
chr10	109404728	.	AGCGAG	A	2938.57	PASS	AB=0.514;AC=9;AF=0.161;AN=56;BaseQRankSum=12.898;DP=656;FS=25.299;HRun=0;HaplotypeScore=176.3868;InbreedingCoeff=0.8590;MQ=84.82;MQ0=0;MQRankSum=-12.704;QD=41.39;ReadPosRankSum=-0.351;VQSLOD=1.7548;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,4674	0/0:18,0:18:51.17:0,51,1614	0/0:25,0:25:72.24:0,72,2166	0/0:19,0:19:57.14:0,57,1422	1/1:0,11:11:12.44:194,12,0	1/1:0,9:9:24.55:493,25,0	1/1:0,22:22:54.09:1004,54,0	0/0:26,0:26:75.26:0,75,2370	0/1:1,17:18:47.28:883,0,47	0/0:18,0:18:51.18:0,51,1621	0/0:18,0:18:45.15:0,45,1495	0/0:27,0:27:81.28:0,81,2583	0/0:29,0:29:87.30:0,87,2869	0/0:26,0:26:78.27:0,78,2453	0/0:36,0:36:99:0,108,3503	0/0:29,0:29:87.28:0,87,2818	0/0:25,0:25:75.24:0,75,2421	0/0:13,0:13:39.13:0,39,1297	0/0:18,0:18:54.19:0,54,1734	0/0:18,0:18:38.98:0,39,1234	0/0:66,0:66:99:0,193,6251	0/0:26,0:26:78.27:0,78,2530	0/0:15,0:15:45.15:0,45,1494	0/0:30,0:30:90.31:0,90,2909	1/1:0,11:11:30.78:528,31,0	0/0:28,0:28:84.23:0,84,2446	0/0:17,0:17:51.16:0,51,1623	0/0:10,0:10:30.10:0,30,943
chr10	109404735	.	TCTAC	T	2575.95	PASS	AB=0.514;AC=9;AF=0.161;AN=56;BaseQRankSum=12.675;DP=651;FS=15.548;HRun=0;HaplotypeScore=165.0706;InbreedingCoeff=0.8556;MQ=84.34;MQ0=0;MQRankSum=-11.277;QD=34.81;ReadPosRankSum=-0.314;VQSLOD=2.6805;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,4036	0/0:17,0:17:51.18:0,51,1444	0/0:25,0:25:75.26:0,75,2024	0/0:18,0:18:47.38:0,47,1168	1/1:0,11:11:10.64:165,11,0	1/1:1,9:10:26.30:444,26,0	1/1:1,22:23:53.31:897,53,0	0/0:26,0:26:69.22:0,69,1907	0/1:1,17:18:33.50:772,0,34	0/0:17,0:17:48.16:0,48,1391	0/0:15,0:15:45.15:0,45,1304	0/0:26,0:26:78.27:0,78,2218	0/0:26,0:26:78.27:0,78,2253	0/0:23,0:23:69.24:0,69,1953	0/0:37,0:37:99:0,111,3142	0/0:29,0:29:87.30:0,87,2521	0/0:27,0:27:78.25:0,78,2148	0/0:14,0:14:42.14:0,42,1215	0/0:20,0:20:60.21:0,60,1707	0/0:17,0:17:42.14:0,42,1179	0/0:62,0:63:99:0,184,5248	0/0:24,0:24:72.25:0,72,2084	0/0:18,0:18:51.17:0,51,1390	0/0:31,0:31:93.27:0,93,2527	1/1:1,11:12:31.05:460,31,0	0/0:25,0:25:75.26:0,75,2097	0/0:18,0:18:54.19:0,54,1499	0/0:13,0:13:39.13:0,39,1096
chr10	109405062	.	TGAGGGACTTCA	T	13048.69	PASS	AB=0.571;AC=19;AF=0.339;AN=56;BaseQRankSum=16.599;DP=740;FS=4.268;HRun=0;HaplotypeScore=240.6843;InbreedingCoeff=0.9117;MQ=81.47;MQ0=0;MQRankSum=-15.806;QD=56.49;ReadPosRankSum=1.877;VQSLOD=4.6032;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,27:41:63.22:2148,63,0	0/0:14,0:14:42.14:0,42,2260	0/0:27,0:27:63.21:0,63,2876	0/0:31,0:31:56.14:0,56,3031	0/0:28,0:28:57.20:0,57,3087	0/0:27,0:27:78.27:0,78,4343	0/0:28,0:28:81.26:0,81,4080	1/1:9,14:23:42.14:1385,42,0	0/0:35,0:35:99:0,102,5524	0/0:27,0:27:66.22:0,66,3250	0/0:16,0:16:35.75:0,36,1724	0/0:39,0:39:99:0,102,5266	0/0:31,0:31:84.29:0,84,4461	0/0:21,0:21:60.21:0,60,3268	0/0:38,0:38:99:0,108,5624	0/0:34,0:34:90.31:0,90,4947	1/1:6,17:23:48.16:1572,48,0	1/1:4,8:12:15.05:511,15,0	1/1:8,6:14:18.03:531,18,0	1/1:1,23:24:51.12:1656,51,0	1/1:14,14:28:12.04:408,12,0	0/0:32,0:32:93.30:0,93,4770	0/0:17,0:17:51.17:0,51,2587	0/0:32,0:32:81.28:0,81,4307	0/0:32,0:32:93.31:0,93,4727	0/1:7,21:28:99:1855,0,271	1/1:6,21:27:60.21:2044,60,0	1/1:1,10:11:30.05:939,30,0
chr10	109405591	.	G	GC	19925	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-11.358;DP=682;FS=0.000;HRun=4;HaplotypeScore=64.4407;InbreedingCoeff=0.9984;MQ=84.35;MQ0=0;MQRankSum=-3.868;QD=34.47;ReadPosRankSum=4.574;VQSLOD=5.1105;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:34:84.27:1133,84,0	0/0:9,0:9:27.08:0,27,306	0/0:21,0:21:29.46:0,29,422	0/0:19,0:19:42.11:0,42,469	1/1:0,14:14:30.10:410,30,0	1/1:0,13:13:36.12:492,36,0	1/1:3,28:31:75.25:1019,75,0	1/1:4,24:28:63.21:862,63,0	1/1:2,16:18:45.15:616,45,0	0/0:23,0:22:63.17:0,63,703	0/0:8,0:8:21.05:0,21,232	1/1:1,42:43:99:1557,114,0	1/1:2,19:21:51.17:698,51,0	1/1:1,31:32:87.29:1190,87,0	1/1:3,41:44:99:1558,114,0	0/0:24,0:24:72.21:0,72,816	1/1:5,45:49:99:1723,126,0	1/1:0,32:32:87.29:1190,87,0	1/1:1,18:19:54.16:700,54,0	1/1:1,20:21:60.20:820,60,0	1/1:4,49:53:99:1805,132,0	1/1:2,14:16:36.12:488,36,0	1/1:5,13:18:36.09:474,36,0	1/1:1,11:12:30.10:403,30,0	1/1:3,13:16:36.12:492,36,0	1/1:0,25:25:75.22:994,75,0	1/1:2,26:28:66.21:891,66,0	1/1:0,10:10:30.10:410,30,0
chr10	109407187	.	G	GCTA	13493.39	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-14.542;DP=703;FS=0.309;HRun=0;HaplotypeScore=103.1685;InbreedingCoeff=0.9990;MQ=91.10;MQ0=1;MQRankSum=-6.316;QD=51.90;ReadPosRankSum=2.318;VQSLOD=6.8749;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,38:41:87.30:1941,87,0	0/0:10,0:10:27.09:0,27,441	0/0:31,0:31:75.24:0,75,1163	0/0:34,0:34:87.29:0,87,1354	0/0:11,0:11:30.10:0,30,490	0/0:19,0:19:48.16:0,48,784	0/0:44,0:44:99:0,108,1731	1/1:3,19:24:66.19:1349,66,0	0/0:25,0:25:69.24:0,69,1121	0/0:36,0:36:93.30:0,93,1476	0/0:10,0:10:30.08:0,30,464	0/0:29,0:29:84.29:0,84,1366	0/0:21,0:21:60.16:0,60,950	0/0:26,0:26:75.26:0,75,1223	0/0:29,0:28:78.25:0,78,1244	0/0:32,0:32:96.31:0,96,1544	1/1:1,26:27:66.23:1472,66,0	1/1:1,18:20:48.16:1070,48,0	1/1:8,8:16:33.11:732,33,0	1/1:1,18:19:45.15:1004,45,0	1/1:5,36:42:83.83:1873,84,0	0/0:25,0:25:66.21:0,66,1054	0/0:8,0:8:21.07:0,21,343	0/0:32,0:32:90.31:0,90,1462	0/0:21,0:21:51.17:0,51,820	1/1:2,31:33:90.29:1920,90,0	1/1:2,23:27:63.22:1395,63,0	1/1:0,11:11:33.11:736,33,0
chr10	109407244	.	GACACACACACACACACACACACACAC	G	2391.35	PASS	AB=0.640;AC=9;AF=0.161;AN=56;BaseQRankSum=5.058;DP=510;FS=10.214;HRun=0;HaplotypeScore=295.4835;InbreedingCoeff=0.5798;MQ=69.78;MQ0=8;MQRankSum=-3.901;QD=26.28;ReadPosRankSum=-0.003;VQSLOD=0.6219;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:42.14:0,42,2015	0/0:4,0:4:3.01:0,3,280	0/0:41,0:23:5.94:0,6,84	0/0:26,0:18:3.01:0,3,124	1/1:6,6:12:6.02:355,6,0	1/1:7,6:13:9.03:606,9,0	1/1:27,0:27:2.84:14,3,0	0/0:19,0:18:18.06:0,18,963	1/1:19,2:23:8.46:396,8,0	0/0:16,0:16:34.95:0,35,1689	0/0:7,0:7:9.03:0,9,873	0/0:14,0:17:36.12:0,36,2639	0/0:15,0:16:33.11:0,33,2447	0/0:16,0:16:24.08:0,24,1665	0/0:19,0:25:39.02:0,39,2592	0/0:15,0:22:33.11:0,33,2382	0/0:19,0:22:21.54:0,22,1032	0/0:13,0:14:25.64:0,26,1228	0/0:12,0:12:6.02:0,6,378	0/0:5,0:5:6.02:0,6,378	0/0:30,0:31:27.09:0,27,1612	0/0:15,0:15:12.04:0,12,818	0/0:11,0:11:24.08:0,24,1650	0/0:26,0:32:39.13:0,39,2306	0/1:7,8:16:73.87:1157,0,74	0/0:7,0:7:19.31:0,19,1081	0/0:16,0:18:27.09:0,27,1250	0/0:6,0:5:7.84:0,8,337
chr10	109408844	.	CT	C	6776.99	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.613;DP=713;FS=2.243;HRun=2;HaplotypeScore=77.7764;InbreedingCoeff=0.9995;MQ=82.07;MQ0=0;MQRankSum=-0.172;QD=35.11;ReadPosRankSum=4.653;VQSLOD=5.3103;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:39:99:0,108,1610	0/0:8,0:8:24.08:0,24,359	0/0:20,0:20:56.27:0,56,816	0/0:21,0:21:56.99:0,57,769	0/0:18,0:18:51.16:0,51,743	0/0:20,0:20:60.20:0,60,893	0/0:32,0:32:90.27:0,90,1303	0/0:37,0:37:99:0,99,1482	0/0:24,0:24:72.24:0,72,1064	0/0:17,0:17:45.15:0,45,658	0/0:11,0:11:33.09:0,33,457	1/1:2,39:41:99:1285,99,0	1/1:0,25:25:72.23:935,72,0	1/1:0,36:36:96.31:1247,96,0	1/1:2,25:27:69.22:896,69,0	0/0:20,0:20:57.18:0,57,828	0/0:40,0:40:99:0,120,1776	0/0:27,0:27:81.23:0,81,1184	0/0:15,0:15:45.14:0,45,656	0/0:12,0:12:33.08:0,33,455	0/0:71,0:71:99:0,196,2920	1/1:0,16:16:45.15:584,45,0	1/1:1,15:16:45.15:584,45,0	1/1:0,32:32:96.31:1247,96,0	0/0:20,0:20:60.20:0,60,889	0/0:25,0:25:75.24:0,75,1089	0/0:26,0:26:75.25:0,75,1105	0/0:17,0:17:42.14:0,42,629
chr10	109410569	.	T	TC	5179.03	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-12.585;DP=702;FS=0.713;HRun=7;HaplotypeScore=73.3256;InbreedingCoeff=0.9950;MQ=86.53;MQ0=0;MQRankSum=-0.819;QD=28.77;ReadPosRankSum=2.376;VQSLOD=5.5067;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,1350	0/0:17,0:17:45.07:0,45,434	0/0:27,0:27:61.80:0,62,566	0/0:26,0:26:12.70:0,13,345	0/0:18,0:18:54.09:0,54,521	0/0:20,0:20:45.05:0,45,429	0/0:34,0:34:96.15:0,96,927	0/0:34,0:34:81.09:0,81,767	0/0:26,0:26:66.10:0,66,637	0/0:16,0:16:45.07:0,45,434	0/0:11,0:11:33.05:0,33,315	1/1:2,18:20:48.15:580,48,0	1/1:0,30:30:78.24:940,78,0	1/1:4,24:28:54.17:652,54,0	1/1:3,27:30:78.24:942,78,0	0/0:28,0:28:75.10:0,75,719	0/0:33,0:33:87.11:0,87,829	0/0:30,0:30:87.14:0,87,840	0/0:13,0:13:33.05:0,33,319	0/0:18,0:18:48.06:0,48,453	0/0:45,0:45:99:0,123,1182	1/1:0,25:25:69.21:833,69,0	1/1:2,17:19:38.79:471,39,0	1/1:3,25:28:63.19:761,63,0	0/0:22,0:21:60.09:0,60,579	0/0:15,0:14:39.06:0,39,376	0/0:28,0:27:74.96:0,75,703	0/0:12,0:12:36.06:0,36,347
chr10	109412908	.	C	CA	29205.48	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-6.518;DP=776;FS=4.346;HRun=1;HaplotypeScore=85.6210;InbreedingCoeff=0.9992;MQ=91.21;MQ0=0;MQRankSum=-10.493;QD=44.73;ReadPosRankSum=6.348;VQSLOD=3.8934;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,37:38:99:1583,99,0	0/0:9,0:9:24.08:0,24,334	0/0:33,0:33:96.31:0,96,1308	0/0:28,0:28:84.18:0,84,1106	1/1:0,28:28:72.25:1151,72,0	1/1:0,32:32:87.30:1391,87,0	1/1:0,28:28:78.27:1247,78,0	1/1:1,26:27:81.25:1247,81,0	1/1:1,26:27:72.11:1151,72,0	0/0:17,0:17:51.17:0,51,710	0/0:10,0:10:27.09:0,27,377	1/1:0,27:27:78.27:1247,78,0	1/1:0,28:28:84.29:1342,84,0	1/1:0,32:32:81.28:1295,81,0	1/1:0,40:40:99:1919,120,0	0/0:25,1:26:27.27:0,27,956	1/1:0,28:28:84.29:1343,84,0	1/1:0,29:29:87.30:1388,87,0	1/1:0,34:34:99:1595,102,0	1/1:0,16:16:42.14:672,42,0	1/1:0,63:63:99:2830,178,0	1/1:0,20:20:57.19:909,57,0	1/1:0,23:23:63.01:1007,63,0	1/1:0,26:26:78.27:1247,78,0	1/1:0,22:22:63.21:1007,63,0	1/1:2,32:34:57.45:1481,57,0	1/1:0,29:29:84.08:1338,84,0	1/1:0,22:22:50.99:815,51,0
chr10	109413356	.	G	GCA	20077.03	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-3.890;DP=465;FS=6.858;HRun=0;HaplotypeScore=64.9550;InbreedingCoeff=0.9640;MQ=76.12;MQ0=0;MQRankSum=-3.475;QD=49.57;ReadPosRankSum=4.102;VQSLOD=6.0442;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:51.17:955,51,0	0/0:7,0:7:21.07:0,21,307	0/0:9,0:9:24.08:0,24,343	0/0:11,0:11:21.07:0,21,289	1/1:3,8:11:21.07:393,21,0	1/1:1,10:11:30.10:562,30,0	1/1:2,46:50:99:2585,138,0	1/1:3,15:18:42.14:781,42,0	1/1:1,14:15:42.14:787,42,0	0/0:17,0:17:36.12:0,36,527	0/0:5,0:5:12.04:0,12,175	1/1:2,18:20:54.19:1007,54,0	1/1:0,8:8:24.08:450,24,0	1/1:2,30:33:93.32:1735,93,0	1/1:0,13:13:39.13:730,39,0	0/0:11,0:11:30.10:0,30,442	1/1:1,27:28:72.25:1349,72,0	1/1:0,28:29:75.26:1405,75,0	1/1:3,14:19:51.17:895,51,0	1/1:1,2:3:6.02:112,6,0	1/1:0,45:46:99:2246,120,0	1/1:0,6:6:18.06:337,18,0	1/1:0,6:6:18.06:337,18,0	1/1:1,31:32:84.29:1574,84,0	1/1:1,7:8:21.07:393,21,0	1/1:2,11:13:33.11:603,33,0	1/1:0,8:8:21.07:393,21,0	1/1:0,9:9:24.08:448,24,0
chr10	109413881	.	GA	G	6311.65	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-1.269;DP=489;FS=1.992;HRun=10;HaplotypeScore=68.5158;InbreedingCoeff=0.9645;MQ=69.76;MQ0=14;MQRankSum=-2.339;QD=18.35;ReadPosRankSum=3.645;VQSLOD=5.6395;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,26:31:62.96:547,63,0	0/0:4,0:4:12.03:0,12,133	0/0:44,0:17:24.18:0,24,216	0/0:54,1:17:17.85:0,18,154	1/1:5,7:12:20.94:178,21,0	1/1:5,10:15:32.67:289,33,0	1/1:7,8:15:29.98:261,30,0	1/1:3,16:19:47.99:416,48,0	1/1:6,9:15:16.22:261,16,0	0/0:15,0:16:23.90:0,24,245	0/0:11,0:10:15.03:0,15,159	1/1:6,6:12:29.19:238,29,0	1/1:5,8:13:26.96:231,27,0	1/1:4,10:14:29.99:260,30,0	1/1:2,6:8:20.74:168,21,0	0/0:11,0:11:27.06:0,27,291	1/1:7,20:27:36.44:448,36,0	1/1:10,27:37:80.92:702,81,0	1/1:6,12:17:33.89:308,34,0	1/1:1,9:10:26.99:234,27,0	1/1:2,10:12:20.99:182,21,0	1/1:1,5:6:17.99:155,18,0	1/1:5,2:7:8.95:71,9,0	1/1:5,6:11:23.75:200,24,0	1/1:5,13:18:41.98:364,42,0	1/1:9,14:23:50.91:433,51,0	1/1:2,13:15:26.57:234,27,0	1/1:1,5:6:15:130,15,0
chr10	109413903	.	G	GA	1658.55	PASS	AB=0.982;AC=28;AF=0.500;AN=56;BaseQRankSum=5.045;DP=572;FS=4.795;HRun=14;HaplotypeScore=90.8901;InbreedingCoeff=0.6850;MQ=59.73;MQ0=22;MQRankSum=-2.750;QD=4.57;ReadPosRankSum=0.127;VQSLOD=2.2021;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:52.34:0,52,350	0/0:4,0:4:5.76:0,6,39	0/1:64,0:14:1.69:2,0,23	0/1:71,1:18:2.81:3,0,20	1/1:11,1:25:44.18:244,44,0	1/1:12,0:18:32.07:176,32,0	1/1:5,1:14:15.92:87,16,0	0/0:22,1:23:7.01:0,7,156	1/1:7,0:11:6.81:83,7,0	0/0:18,0:18:36.85:0,37,219	0/0:10,0:9:20.55:0,21,130	1/1:7,7:15:26.83:223,27,0	1/1:10,3:13:10.27:180,10,0	1/1:6,5:11:12:105,12,0	1/1:5,10:15:22.35:175,22,0	0/0:11,0:11:22.45:0,22,136	0/0:25,1:26:7.16:0,7,274	0/0:39,0:40:74.14:0,74,528	0/1:20,0:21:8.86:9,0,142	0/0:10,0:11:22.70:0,23,139	0/0:8,0:7:8.81:0,9,55	1/1:4,5:9:15:131,15,0	1/1:0,6:6:12:105,12,0	1/1:11,2:13:4.91:152,5,0	1/1:11,0:27:32.37:183,32,0	0/1:22,0:25:8.65:9,0,170	0/0:16,0:17:28.56:0,29,177	0/0:10,0:10:14.74:0,15,96
chr10	109417979	.	GA	G	3626.56	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=-0.833;DP=660;FS=2.224;HRun=2;HaplotypeScore=110.8735;InbreedingCoeff=0.7779;MQ=80.31;MQ0=0;MQRankSum=-1.748;QD=25.36;ReadPosRankSum=-2.040;VQSLOD=2.9982;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:67.15:0,67,505	0/0:5,0:5:12.04:0,12,179	0/0:15,0:15:45.15:0,45,662	0/1:20,0:20:13.58:14,0,523	1/1:0,10:10:24.08:312,24,0	1/1:1,20:21:60.19:779,60,0	1/1:0,38:38:99:1324,102,0	0/0:27,0:27:21.82:0,22,310	1/1:1,14:15:36.12:467,36,0	0/0:24,0:24:72.24:0,72,1078	0/0:6,0:6:15.05:0,15,224	0/0:31,0:31:90.04:0,90,1304	0/0:22,0:22:66.22:0,66,984	0/0:29,0:29:87.28:0,87,1284	0/0:19,0:19:54.16:0,54,772	0/0:19,0:19:57.19:0,57,854	0/0:49,0:49:99:0,115,776	0/0:34,0:34:13.63:0,14,411	0/1:18,0:18:31.57:32,0,178	0/0:13,0:13:25.59:0,26,247	0/0:72,0:72:99:0,187,1189	0/0:17,0:17:48.16:0,48,706	0/0:19,0:19:57.18:0,57,832	0/0:33,0:32:99:0,99,1433	1/1:0,21:21:54.18:701,54,0	0/0:19,0:19:55.25:0,55,350	0/0:23,0:23:61.41:0,61,365	0/0:8,0:8:23.38:0,23,148
chr10	109419557	.	GC	G	11244.92	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.847;DP=692;FS=24.791;HRun=1;HaplotypeScore=86.2908;InbreedingCoeff=0.9999;MQ=86.27;MQ0=0;MQRankSum=-3.050;QD=38.25;ReadPosRankSum=2.199;VQSLOD=2.9590;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:81.27:1131,81,0	0/0:17,0:17:48.15:0,48,743	0/0:25,0:24:57.19:0,57,898	0/0:21,0:21:63.20:0,63,961	0/0:19,0:19:54.18:0,54,862	0/0:15,0:14:45.14:0,45,696	0/0:46,0:46:99:0,138,2180	1/1:0,27:27:81.20:1060,81,0	0/0:25,0:25:75.26:0,75,1196	0/0:14,0:14:42.14:0,42,669	0/0:17,0:17:48.16:0,48,747	0/0:24,0:24:72.23:0,72,1125	0/0:24,0:24:72.23:0,72,1127	0/0:18,0:18:54.17:0,54,836	0/0:21,0:21:63.20:0,63,984	0/0:24,0:24:69.24:0,69,1100	1/1:0,36:36:96.30:1342,96,0	1/1:0,30:30:90.30:1258,90,0	1/1:0,25:25:75.21:1010,75,0	1/1:0,12:12:30.10:419,30,0	1/1:0,77:77:99:2807,201,0	0/0:14,0:14:39.13:0,39,618	0/0:16,0:16:48.16:0,48,756	0/0:36,0:36:99:0,108,1696	0/0:22,0:22:60.15:0,60,878	1/1:0,18:18:51.17:713,51,0	1/1:0,23:23:66.22:917,66,0	1/1:0,15:15:42.14:587,42,0
chr10	109419838	.	G	GT	770.92	PASS	AB=0.976;AC=15;AF=0.268;AN=56;BaseQRankSum=2.033;DP=442;FS=3.522;HRun=11;HaplotypeScore=47.5444;InbreedingCoeff=0.2893;MQ=67.92;MQ0=1;MQRankSum=1.230;QD=4.28;ReadPosRankSum=-1.803;VQSLOD=-0.0517;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:22.43:0,22,242	0/0:6,0:6:14.92:0,15,116	1/1:16,0:7:2.68:11,3,0	0/0:8,0:6:1.65:0,2,21	0/0:17,0:17:44.79:0,45,343	0/0:24,0:24:52.87:0,53,393	0/1:19,2:21:7.10:7,0,317	0/1:20,2:23:18.14:18,0,255	0/0:14,0:14:35.86:0,36,278	0/0:12,0:12:17.88:0,18,139	0/0:13,0:13:26.12:0,26,193	0/1:15,0:15:15.48:15,0,53	1/1:10,0:9:20.25:144,20,0	0/1:12,0:12:12.95:59,0,13	1/1:9,19:28:4.95:411,5,0	0/0:13,2:15:5.38:0,5,223	0/0:29,0:29:71.65:0,72,556	0/0:20,1:22:28.37:0,28,392	0/0:20,0:20:21.23:0,21,320	0/0:11,0:11:26.47:0,26,208	0/0:5,0:5:14.94:0,15,116	0/1:17,0:17:8.01:116,0,8	1/1:12,0:12:2.59:91,3,0	0/1:12,0:12:4.53:52,0,5	0/1:12,0:14:1.46:1,0,162	0/0:16,0:17:31.83:0,32,231	0/0:17,0:17:29.81:0,30,232	0/0:17,1:18:11.37:0,11,271
chr10	109427377	.	CCT	C	4334.47	PASS	AB=1.000;AC=26;AF=0.500;AN=52;BaseQRankSum=-3.730;DP=542;FS=0.541;HRun=0;HaplotypeScore=71.1810;InbreedingCoeff=0.6754;MQ=64.41;MQ0=18;MQRankSum=0.263;QD=15.16;ReadPosRankSum=0.122;VQSLOD=4.6041;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:48,0:46:46.06:913,46,0	0/0:5,0:5:9.02:0,9,116	0/0:40,1:11:11.42:0,11,86	./.	0/0:5,0:5:3.47:0,3,26	1/1:12,0:12:0.47:1,0,0	0/0:21,0:20:0.94:0,1,2	1/1:16,19:34:54.08:594,54,0	1/1:15,0:13:3.15:12,3,0	0/0:12,0:12:17.94:0,18,218	0/0:4,0:4:6.02:0,6,92	0/0:22,0:21:22.95:0,23,146	0/0:17,0:17:1.87:0,2,6	0/0:20,0:20:26.20:0,26,181	0/1:25,0:24:12.17:12,0,82	0/0:25,0:25:24.36:0,24,760	1/1:24,0:24:63.18:732,63,0	1/1:21,0:23:45.37:483,45,0	1/1:6,8:13:23.84:243,24,0	1/1:3,4:6:5.94:41,6,0	1/1:21,0:20:36.11:426,36,0	0/1:6,0:5:0.01:0,0,0	./.	0/0:17,0:16:19.56:0,20,76	0/0:9,0:9:0.47:0,0,1	1/1:8,12:20:22.73:385,23,0	1/1:4,11:15:2.92:34,3,0	1/1:21,0:19:39.12:459,39,0
chr10	109427398	.	CTT	C	3202.97	PASS	AB=0.925;AC=42;AF=0.778;AN=54;BaseQRankSum=3.027;DP=509;FS=20.668;HRun=3;HaplotypeScore=81.0577;InbreedingCoeff=-0.0050;MQ=55.02;MQ0=27;MQRankSum=5.339;QD=7.12;ReadPosRankSum=2.338;VQSLOD=-0.7511;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:53,0:49:21.47:286,21,0	0/1:5,0:5:17.93:18,0,45	0/1:30,0:8:4.87:5,0,6	./.	1/1:1,0:1:2.99:23,3,0	1/1:8,0:7:17.98:149,18,0	1/1:19,0:18:40.62:315,41,0	0/1:31,0:30:34.65:75,0,35	1/1:9,0:6:14.97:122,15,0	0/1:10,0:10:34.24:34,0,95	0/1:7,0:7:15.95:16,0,44	1/1:18,0:17:7.61:234,8,0	1/1:1,17:18:0.85:15,1,0	0/1:20,0:20:22.79:190,0,23	0/1:3,21:23:36.15:36,0,42	0/0:26,0:26:18.78:0,19,399	1/1:29,0:29:70.61:345,71,0	1/1:27,0:25:38.75:272,39,0	0/1:17,0:16:38.71:90,0,39	0/1:9,0:8:4.84:20,0,5	1/1:23,0:21:34.07:219,34,0	0/1:3,2:4:0:0,0,0	1/1:2,0:2:5.96:43,6,0	1/1:24,1:22:27.21:207,27,0	1/1:5,0:5:11.95:94,12,0	1/1:24,0:24:48.52:364,49,0	1/1:14,0:13:8.52:57,9,0	1/1:17,0:14:23.77:123,24,0
chr10	109430241	.	G	GC	678.76	PASS	AB=0.774;AC=7;AF=0.125;AN=56;BaseQRankSum=-1.759;DP=539;FS=1.370;HRun=10;HaplotypeScore=68.3075;InbreedingCoeff=-0.1287;MQ=74.43;MQ0=0;MQRankSum=0.855;QD=6.17;ReadPosRankSum=-1.430;VQSLOD=1.2572;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:71.83:0,72,588	0/0:6,0:6:5.98:0,6,49	0/0:20,0:24:23.47:0,23,166	0/1:17,0:17:39.43:39,0,48	0/1:4,4:8:12.61:81,0,13	0/1:3,8:11:28.23:139,0,28	0/1:7,18:27:57.05:455,0,57	0/1:17,0:20:3.56:4,0,113	0/0:22,0:23:55.95:0,56,449	0/0:19,0:19:32.87:0,33,267	0/0:12,0:12:26.92:0,27,217	0/0:17,0:17:38.50:0,38,311	0/0:18,0:18:41.91:0,42,340	0/0:22,0:23:55.93:0,56,446	0/0:30,1:32:47.93:0,48,586	0/0:24,0:25:58.95:0,59,474	0/0:20,1:21:46.94:0,47,371	0/0:15,0:19:38:0,38,258	0/1:10,1:14:9.58:10,0,113	0/0:18,0:18:6.76:0,7,243	0/0:22,0:22:41.89:0,42,345	0/0:14,0:16:31.01:0,31,234	0/0:6,0:6:11.98:0,12,99	0/0:30,0:31:79.93:0,80,646	0/1:6,6:12:74.97:75,0,77	0/0:17,0:17:38.94:0,39,320	0/0:37,0:37:84.88:0,85,673	0/0:5,0:6:14.02:0,14,104
chr10	109430585	.	TG	T	2818.50	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.964;DP=625;FS=0.916;HRun=4;HaplotypeScore=67.6552;InbreedingCoeff=0.9955;MQ=69.24;MQ0=1;MQRankSum=-0.655;QD=29.98;ReadPosRankSum=-0.817;VQSLOD=3.5010;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,1964	0/0:9,0:9:27.06:0,27,328	0/0:18,0:16:48.13:0,48,650	0/0:22,0:19:51.12:0,51,655	1/1:2,16:18:51.14:597,51,0	1/1:2,12:14:42.13:504,42,0	1/1:1,22:23:57.17:684,57,0	0/0:17,0:16:45.12:0,45,600	1/1:3,20:23:60.18:718,60,0	0/0:18,0:18:54.15:0,54,733	0/0:13,0:13:39.12:0,39,530	0/0:26,0:26:75.22:0,75,997	0/0:25,0:25:63.20:0,63,863	0/0:26,0:26:69.19:0,69,926	0/0:25,0:25:57.19:0,57,797	0/0:17,0:17:45.15:0,45,630	0/0:42,0:42:99:0,123,1662	0/0:32,0:32:96.22:0,96,1280	0/0:16,0:15:42.09:0,42,550	0/0:17,0:17:51.16:0,51,696	0/0:38,0:38:99:0,108,1440	0/0:21,0:21:53.37:0,53,687	0/0:7,0:7:14.96:0,15,184	0/0:38,0:38:99:0,108,1489	1/1:1,15:16:44.99:491,45,0	0/0:26,0:26:72.24:0,72,1007	0/0:21,0:21:60.19:0,60,822	0/0:8,0:8:24.05:0,24,316
chr10	109430658	.	AG	A	2604.67	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=2.826;DP=676;FS=0.411;HRun=6;HaplotypeScore=96.3636;InbreedingCoeff=0.9649;MQ=67.81;MQ0=6;MQRankSum=1.722;QD=18.47;ReadPosRankSum=4.082;VQSLOD=3.0595;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:92.69:0,93,1002	0/0:10,0:10:27.02:0,27,312	0/0:79,1:35:41.62:0,42,429	0/0:57,0:22:34.12:0,34,246	0/0:17,0:17:5.37:0,5,55	0/0:18,0:18:13.32:0,13,53	0/0:27,0:27:31.37:0,31,175	0/0:20,0:20:32.88:0,33,609	0/0:14,0:13:11.44:0,11,58	0/0:30,0:30:67.79:0,68,773	0/0:11,0:11:26.64:0,27,294	1/1:5,20:25:50.12:537,50,0	1/1:5,12:16:21:216,21,0	1/1:1,22:23:44.48:458,44,0	1/1:0,18:18:24.06:257,24,0	0/0:21,0:21:56.16:0,56,655	0/0:33,0:33:88.99:0,89,1066	0/0:30,0:30:75.88:0,76,835	0/0:19,0:19:53.80:0,54,558	0/0:16,0:16:42.57:0,43,503	0/0:21,0:21:45.19:0,45,611	1/1:1,18:19:50.83:490,51,0	1/1:2,9:11:20.47:241,20,0	1/1:3,25:28:51.92:603,52,0	0/0:23,0:23:19.96:0,20,107	0/0:25,0:25:56.80:0,57,874	0/0:16,0:16:38.88:0,39,453	0/0:12,0:12:31.85:0,32,338
chr10	109430664	.	GA	G	2197.27	PASS	AB=0.979;AC=22;AF=0.393;AN=56;BaseQRankSum=13.461;DP=679;FS=1.103;HRun=11;HaplotypeScore=95.2161;InbreedingCoeff=0.5226;MQ=70.40;MQ0=7;MQRankSum=1.085;QD=5.77;ReadPosRankSum=4.404;VQSLOD=1.9468;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:36:59.08:0,59,747	0/0:9,0:10:20.14:0,20,224	0/1:77,2:36:23.11:23,0,228	0/1:61,1:23:35.06:35,0,93	1/1:5,13:18:44.88:360,45,0	1/1:1,17:18:41.95:344,42,0	1/1:5,22:29:58:454,58,0	0/0:19,0:19:24.19:0,24,423	1/1:3,9:11:26.94:220,27,0	0/0:26,2:28:16.84:0,17,564	0/0:9,0:9:18.05:0,18,190	1/1:23,0:23:2.28:72,2,0	1/1:13,0:12:13.74:54,14,0	1/1:22,0:22:30.20:104,30,0	0/1:20,0:20:26.38:29,0,26	0/0:22,0:22:62.92:0,63,633	0/0:30,3:34:19.07:0,19,765	0/0:26,0:28:68.96:0,69,696	0/0:21,0:21:32.47:0,32,505	0/0:16,1:17:17.44:0,17,361	0/0:20,0:21:50.94:0,51,508	0/1:20,0:20:12.13:54,0,12	0/1:10,1:11:11.84:36,0,12	0/1:28,0:28:18.88:85,0,19	1/1:8,18:26:65.86:529,66,0	0/0:22,2:24:38.72:0,39,592	0/0:15,0:15:36.06:0,36,360	0/0:14,0:14:34.30:0,34,336
chr10	109432808	.	CAAGG	C	19595.03	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=6.123;DP=586;FS=2.784;HRun=0;HaplotypeScore=108.1326;InbreedingCoeff=0.9825;MQ=81.09;MQ0=1;MQRankSum=-5.601;QD=39.43;ReadPosRankSum=4.241;VQSLOD=4.7918;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:29:54.19:985,54,0	0/0:5,0:5:12.04:0,12,316	0/0:12,0:12:33.11:0,33,781	0/0:25,0:25:65.20:0,65,1519	1/1:3,13:16:26.81:496,27,0	1/1:1,8:9:18.06:330,18,0	1/1:0,33:33:78.27:1433,78,0	1/1:7,16:23:48.10:729,48,0	1/1:2,17:19:51.17:938,51,0	0/0:18,0:18:42.13:0,42,1032	0/0:8,0:8:24.08:0,24,629	1/1:3,36:38:99:1825,102,0	1/1:1,23:24:62.82:1158,63,0	1/1:2,28:30:72.25:1320,72,0	1/1:2,23:25:48.16:883,48,0	0/0:21,0:21:57.20:0,57,1472	1/1:2,31:33:81.28:1489,81,0	1/1:5,32:37:78.27:1431,78,0	1/1:1,9:11:24.04:392,24,0	1/1:0,9:9:27.02:438,27,0	1/1:4,36:40:55:958,55,0	1/1:1,11:12:23.99:441,24,0	1/1:0,5:5:12.04:221,12,0	1/1:3,34:37:77.97:1434,78,0	1/1:0,17:17:33.11:607,33,0	1/1:4,16:20:48.16:880,48,0	1/1:0,23:22:48.16:883,48,0	1/1:0,6:6:18.06:323,18,0
chr10	109435383	.	A	AC	4628.55	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=2.307;DP=868;FS=1.684;HRun=2;HaplotypeScore=88.3773;InbreedingCoeff=0.9976;MQ=83.02;MQ0=0;MQRankSum=-0.115;QD=36.45;ReadPosRankSum=1.114;VQSLOD=5.3034;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,162,1966	0/0:8,0:8:24.08:0,24,297	0/0:25,0:25:66.20:0,66,806	0/0:24,0:24:61.99:0,62,678	1/1:0,15:15:33.11:475,33,0	1/1:1,26:27:78.26:1123,78,0	1/1:3,31:34:87.29:1253,87,0	0/0:30,0:30:87.26:0,87,1067	1/1:2,29:31:38.06:1000,38,0	0/0:46,0:46:99:0,132,1626	0/0:14,0:14:42.13:0,42,520	0/0:44,0:44:99:0,126,1548	0/0:39,0:39:99:0,111,1375	0/0:43,0:43:99:0,123,1524	0/0:29,0:29:84.26:0,84,1038	0/0:24,0:24:72.23:0,72,892	0/0:31,0:31:90.25:0,90,1099	0/0:32,0:32:90.23:0,90,1084	0/0:25,0:25:69.22:0,69,852	0/0:19,0:19:57.18:0,57,705	0/0:86,0:86:99:0,253,3097	0/0:17,0:17:45.14:0,45,557	0/0:7,0:7:18.06:0,18,222	0/0:61,0:61:99:0,175,2156	1/1:1,19:20:54.18:778,54,0	0/0:27,0:27:72.23:0,72,893	0/0:38,0:38:99:0,105,1275	0/0:14,0:14:42.13:0,42,519
chr10	109436539	.	GA	G	7437.60	PASS	AB=0.746;AC=34;AF=0.607;AN=56;BaseQRankSum=-4.002;DP=643;FS=1.145;HRun=11;HaplotypeScore=76.7922;InbreedingCoeff=0.9085;MQ=72.76;MQ0=5;MQRankSum=-0.135;QD=17.75;ReadPosRankSum=2.226;VQSLOD=5.8508;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,33:37:93.97:751,94,0	0/1:9,1:10:0.58:1,0,200	0/0:45,0:24:40.89:0,41,323	0/0:26,0:15:17.44:0,17,167	0/0:3,0:21:45.96:0,46,216	0/0:2,0:17:45.69:0,46,246	0/0:5,0:22:40.08:0,40,208	1/1:5,34:39:74.77:788,75,0	0/0:3,0:18:39.98:0,40,208	0/0:24,0:24:62.69:0,63,698	0/0:15,0:16:41.94:0,42,430	1/1:4,16:20:34.78:276,35,0	1/1:2,9:11:23.97:197,24,0	1/1:1,16:17:38.95:320,39,0	1/1:1,21:22:50.81:419,51,0	0/0:16,0:16:45.11:0,45,473	1/1:2,19:21:50.94:419,51,0	1/1:2,22:24:50.93:419,51,0	1/1:10,20:27:21.74:405,22,0	1/1:2,27:29:77.79:628,78,0	0/1:4,10:14:2.87:191,0,3	1/1:2,20:22:55.94:444,56,0	1/1:2,14:16:26.88:221,27,0	1/1:2,30:32:80.82:658,81,0	0/0:1,0:19:40.03:0,40,213	1/1:6,28:34:51.11:612,51,0	1/1:6,18:24:44.93:369,45,0	1/1:1,16:17:38.94:320,39,0
chr10	109436651	.	G	GGA	3718.22	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.519;DP=569;FS=0.996;HRun=0;HaplotypeScore=73.9522;InbreedingCoeff=0.9957;MQ=82.47;MQ0=1;MQRankSum=-1.475;QD=42.74;ReadPosRankSum=1.564;VQSLOD=5.4510;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,1663	0/0:12,0:12:33.10:0,33,480	0/0:24,0:24:59.94:0,60,847	0/0:15,0:15:33.11:0,33,491	1/1:0,27:27:66.22:1165,66,0	1/1:0,21:21:60.21:1094,60,0	1/1:0,17:17:36.12:637,36,0	0/0:35,0:35:99:0,105,1498	1/1:1,7:8:14.79:273,15,0	0/0:25,0:25:63.21:0,63,931	0/0:17,0:17:51.17:0,51,772	0/0:16,0:16:42.13:0,42,615	0/0:12,0:12:36.12:0,36,544	0/0:17,0:17:51.15:0,51,741	0/0:24,0:24:72.24:0,72,1069	0/0:19,0:19:57.18:0,57,843	0/0:26,0:26:78.25:0,78,1159	0/0:18,0:18:54.17:0,54,796	0/0:18,0:18:45.12:0,45,634	0/0:14,0:14:42.10:0,42,592	0/0:25,0:24:69.20:0,69,981	0/0:21,0:21:63.20:0,63,932	0/0:23,0:23:60.13:0,60,821	0/0:17,0:17:51.13:0,51,746	1/1:0,13:14:30.10:549,30,0	0/0:28,0:28:75.21:0,75,1098	0/0:23,0:23:66.20:0,66,956	0/0:12,0:12:36.04:0,36,494
chr10	109437630	.	T	TTTTGG	2563.62	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=5.234;DP=659;FS=0.000;HRun=0;HaplotypeScore=129.1189;InbreedingCoeff=0.7202;MQ=36.89;MQ0=90;MQRankSum=-5.221;QD=17.21;ReadPosRankSum=2.550;VQSLOD=3.3268;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:19:23.53:0,24,348	0/0:8,0:7:21.07:0,21,325	0/0:72,0:11:18.68:0,19,208	0/0:69,0:18:21.73:0,22,308	1/1:25,3:30:16.60:546,17,0	1/1:5,18:25:29.57:591,30,0	1/1:9,7:14:7.70:151,8,0	0/0:29,0:24:27.65:0,28,578	1/1:7,14:21:20.68:420,21,0	0/0:28,0:21:62.95:0,63,762	0/0:23,0:20:38.94:0,39,487	0/0:13,0:9:19.89:0,20,219	0/0:11,0:8:23.75:0,24,241	0/1:13,0:9:10.12:19,0,10	0/0:15,0:13:4.01:0,4,59	0/0:21,0:19:46.21:0,46,551	0/0:30,0:24:39.94:0,40,409	0/0:18,0:13:3.68:0,4,126	0/0:30,0:24:43.19:0,43,651	0/0:17,0:15:28.73:0,29,311	0/0:6,0:4:11.76:0,12,143	0/0:5,0:4:5.95:0,6,63	0/0:14,0:12:10.10:0,10,92	0/1:9,0:6:2.62:3,0,136	1/1:13,18:28:38.15:1006,38,0	0/0:34,0:28:51.50:0,52,770	0/0:20,0:20:36.35:0,36,521	0/0:25,0:13:19.22:0,19,307
chr10	109437636	.	TTG	T	557.66	PASS	AB=0.997;AC=25;AF=0.446;AN=56;BaseQRankSum=0.354;DP=660;FS=43.114;HRun=0;HaplotypeScore=115.2632;InbreedingCoeff=0.2543;MQ=36.88;MQ0=94;MQRankSum=0.899;QD=1.44;ReadPosRankSum=-2.585;VQSLOD=-0.2353;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,1:24:0.80:1,0,198	0/0:7,0:6:4.92:0,5,129	0/1:76,0:13:0.74:1,0,96	0/0:70,0:19:11.58:0,12,154	0/1:30,0:30:16.24:34,0,16	0/1:25,0:24:9.46:9,0,14	0/1:15,0:11:13.55:33,0,14	0/1:27,0:22:2.83:3,0,162	0/1:24,0:22:9.37:45,0,9	0/0:29,0:21:21.66:0,22,319	0/0:22,0:19:21.93:0,22,246	1/1:12,0:8:16.68:88,17,0	1/1:10,0:7:13.88:75,14,0	1/1:14,0:9:7.01:34,7,0	1/1:16,0:14:15.51:90,16,0	0/0:18,0:16:5.47:0,5,160	0/0:30,0:24:34.20:0,34,222	0/1:18,0:12:8.18:8,0,50	0/1:29,0:23:89.50:89,0,183	0/0:20,0:18:6.17:0,6,185	0/1:6,0:4:0.08:0,0,71	1/1:1,4:4:5.98:53,6,0	1/1:13,1:12:10.54:69,11,0	1/1:9,0:6:15.34:84,15,0	0/1:31,0:27:17.71:18,0,46	0/0:33,0:27:32.36:0,32,425	0/0:17,0:17:12.64:0,13,173	0/0:25,0:12:18.83:0,19,131
chr10	109437647	.	T	TGTTTGTTTG	4240.36	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=-3.955;DP=671;FS=0.501;HRun=0;HaplotypeScore=168.5267;InbreedingCoeff=0.6783;MQ=40.00;MQ0=93;MQRankSum=-3.138;QD=29.45;ReadPosRankSum=2.380;VQSLOD=4.3236;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:25:40.89:0,41,336	0/0:7,0:6:18.03:0,18,299	0/0:79,0:16:21.70:0,22,345	0/0:70,0:16:22.52:0,23,303	1/1:12,17:33:39.16:941,39,0	1/1:28,0:27:41.97:928,42,0	0/1:17,0:13:13.12:334,0,13	0/0:23,0:18:40.70:0,41,407	1/1:19,1:18:30.39:644,30,0	0/0:28,0:20:59.65:0,60,1156	0/0:19,0:16:39.08:0,39,699	0/0:12,0:8:20.62:0,21,220	0/0:8,0:5:13.24:0,13,142	0/1:17,0:12:24.83:25,0,63	0/0:17,0:15:6.88:0,7,113	0/0:20,0:18:42.59:0,43,736	0/0:32,0:26:40.32:0,40,285	0/0:19,0:13:11.11:0,11,55	0/0:28,0:22:41.76:0,42,477	0/0:19,0:17:31.22:0,31,208	0/0:7,0:5:9.35:0,9,66	0/0:8,0:7:14.85:0,15,134	0/0:16,0:14:12.35:0,12,133	0/0:10,0:7:2.51:0,3,61	1/1:29,0:27:56.34:1369,56,0	0/0:31,0:25:55.96:0,56,529	0/0:15,0:15:33.55:0,34,223	0/0:31,0:17:39.72:0,40,482
chr10	109437652	.	T	TTTTTG	4520.52	PASS	AB=0.995;AC=34;AF=0.607;AN=56;BaseQRankSum=-1.523;DP=634;FS=0.453;HRun=0;HaplotypeScore=133.0684;InbreedingCoeff=0.1682;MQ=41.49;MQ0=80;MQRankSum=-2.842;QD=10.44;ReadPosRankSum=2.564;VQSLOD=3.8684;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:22:23.01:187,23,0	0/1:6,0:5:9.56:10,0,54	0/0:71,0:14:11.28:0,11,174	0/0:66,0:16:14.93:0,15,95	0/1:31,0:31:26.97:27,0,77	0/1:28,0:27:18.20:18,0,60	0/1:16,0:13:2.41:2,0,103	1/1:24,1:20:37.93:487,38,0	0/1:20,0:20:50.90:51,0,94	0/0:26,0:18:43.19:0,43,471	0/0:19,0:17:26.90:0,27,281	0/1:10,0:7:3.89:65,0,4	0/1:8,0:5:5.88:9,0,6	1/1:14,0:12:16.37:174,16,0	1/1:17,0:15:15.82:141,16,0	0/0:19,0:18:38.54:0,39,489	1/1:23,5:24:40.63:504,41,0	1/1:15,2:13:20.86:309,21,0	1/1:26,1:22:4.62:523,5,0	1/1:15,2:16:22.95:303,23,0	1/1:6,0:5:8.58:82,9,0	0/1:8,0:7:4.35:62,0,4	0/1:15,0:14:20.99:63,0,21	0/1:10,0:7:9.46:92,0,9	0/1:30,0:28:31.38:31,0,77	1/1:23,6:23:47.29:732,47,0	1/1:12,3:15:21.44:356,21,0	0/1:27,1:17:59.91:292,0,60
chr10	109437877	.	T	TAG	4160.41	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-7.730;DP=674;FS=0.439;HRun=0;HaplotypeScore=85.0569;InbreedingCoeff=0.9961;MQ=73.83;MQ0=0;MQRankSum=-1.181;QD=37.15;ReadPosRankSum=-0.174;VQSLOD=5.5713;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,1644	0/0:6,0:6:18.06:0,18,244	0/0:20,0:20:50.52:0,51,617	0/0:14,0:13:21.07:0,21,287	1/1:2,16:18:33.11:567,33,0	1/1:2,14:16:42.14:745,42,0	1/1:7,26:34:63.22:1110,63,0	0/0:26,0:26:75.25:0,75,1031	1/1:1,24:25:66.23:1171,66,0	0/0:19,0:19:57.18:0,57,762	0/0:16,0:16:48.16:0,48,656	0/0:26,0:26:72.24:0,72,989	0/0:31,0:31:90.27:0,90,1216	0/0:22,0:22:60.20:0,60,824	0/0:33,0:33:84.24:0,84,1119	0/0:31,0:31:84.22:0,84,1114	0/0:30,0:30:81.25:0,81,1091	0/0:42,0:42:99:0,123,1656	0/0:24,0:24:63.19:0,63,848	0/0:15,0:15:36.12:0,36,493	0/0:50,0:50:99:0,135,1835	0/0:8,0:8:24.08:0,24,323	0/0:18,0:18:51.17:0,51,701	0/0:35,0:35:99:0,102,1378	1/1:5,13:19:33.11:568,33,0	0/0:21,0:21:60.20:0,60,824	0/0:23,0:23:69.22:0,69,930	0/0:9,0:9:24.08:0,24,330
chr10	109438985	.	A	AATAATAAGT	9497.14	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.390;DP=658;FS=5.761;HRun=0;HaplotypeScore=182.3410;InbreedingCoeff=0.9819;MQ=66.79;MQ0=0;MQRankSum=-12.329;QD=74.20;ReadPosRankSum=0.044;VQSLOD=4.4034;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,123,3434	0/0:12,0:12:27.09:0,27,743	0/0:9,0:9:15.05:0,15,380	0/0:5,0:5:9.03:0,9,176	1/1:13,22:38:69.23:2879,69,0	1/1:7,15:23:39.13:1682,39,0	1/1:5,8:13:24.08:850,24,0	0/0:30,0:30:75.25:0,75,1916	1/1:9,15:25:39.13:1720,39,0	0/0:26,0:26:72.25:0,72,2086	0/0:31,0:31:69.23:0,69,1872	0/0:14,0:14:39.13:0,39,1049	0/0:19,0:19:54.19:0,54,1557	0/0:21,0:21:57.15:0,57,1459	0/0:27,0:27:66.23:0,66,1789	0/0:25,0:25:63.22:0,63,1748	0/0:20,0:20:45.15:0,45,1263	0/0:21,0:21:45.15:0,45,1174	0/0:24,0:24:63.18:0,63,1310	0/0:34,0:34:96.33:0,96,2584	0/0:10,0:10:27.09:0,27,701	0/0:21,0:21:51.17:0,51,1426	0/0:21,0:21:54.18:0,54,1446	0/0:12,0:12:30.10:0,30,875	1/1:9,16:29:57.19:2366,57,0	0/0:34,0:34:87.28:0,87,2320	0/0:40,0:40:93.32:0,93,2650	0/0:26,0:26:63.19:0,63,1602
chr10	109439813	.	TC	T	7977.32	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.995;DP=715;FS=0.931;HRun=5;HaplotypeScore=67.2404;InbreedingCoeff=0.9931;MQ=91.03;MQ0=0;MQRankSum=-2.443;QD=29.33;ReadPosRankSum=0.713;VQSLOD=5.3274;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,38:44:93.26:1055,93,0	0/0:6,0:6:15.05:0,15,205	0/0:26,0:26:66.19:0,66,863	0/0:30,0:30:80.30:0,80,1017	0/0:19,0:19:54.18:0,54,738	0/0:23,0:23:63.21:0,63,861	0/0:32,0:32:96.24:0,96,1268	1/1:1,29:30:87.23:977,87,0	0/0:32,0:32:93.30:0,93,1255	0/0:24,0:24:72.24:0,72,984	0/0:25,0:25:75.21:0,75,991	0/0:24,0:24:72.24:0,72,985	0/0:33,0:33:99:0,99,1354	0/0:22,0:22:66.22:0,66,902	0/0:29,0:29:87.29:0,87,1189	0/0:23,0:23:66.22:0,66,902	1/1:3,25:28:69.20:783,69,0	1/1:1,17:18:48.14:544,48,0	1/1:1,16:17:48.09:513,48,0	1/1:3,26:29:72.20:816,72,0	1/1:1,41:42:99:1293,114,0	0/0:22,0:22:60.20:0,60,820	0/0:16,0:16:45.15:0,45,615	0/0:30,0:30:90.30:0,90,1231	0/0:27,0:27:75.23:0,75,995	1/1:2,25:27:75.20:841,75,0	1/1:1,32:33:90.26:1018,90,0	1/1:0,4:4:12.03:136,12,0
chr10	109440684	.	CGTT	C	4902.80	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.075;DP=776;FS=0.823;HRun=0;HaplotypeScore=105.0097;InbreedingCoeff=0.9998;MQ=75.95;MQ0=0;MQRankSum=-4.524;QD=38.30;ReadPosRankSum=2.940;VQSLOD=5.4736;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,166,3715	0/0:10,0:10:30.10:0,30,672	0/0:18,0:18:51.17:0,51,1123	0/0:14,0:14:36.12:0,36,732	1/1:0,31:31:72.25:1226,72,0	1/1:0,22:22:51.17:868,51,0	1/1:1,25:26:57.20:970,57,0	0/0:32,0:32:84.27:0,84,1743	1/1:0,18:18:48.16:817,48,0	0/0:31,0:31:93.32:0,93,2116	0/0:13,0:13:39.13:0,39,899	0/0:39,0:39:99:0,117,2594	0/0:43,0:43:99:0,129,2858	0/0:46,0:46:99:0,138,3163	0/0:34,0:34:96.29:0,96,2114	0/0:38,0:38:99:0,111,2515	0/0:22,0:22:66.23:0,66,1423	0/0:27,0:27:81.28:0,81,1858	0/0:20,0:20:57.20:0,57,1270	0/0:23,0:23:69.24:0,69,1535	0/0:33,0:33:96.29:0,96,2116	0/0:22,0:22:60.21:0,60,1341	0/0:23,0:23:69.24:0,69,1569	0/0:32,0:32:93.30:0,93,2075	1/1:4,27:31:60.21:1022,60,0	0/0:38,0:38:99:0,111,2544	0/0:20,0:20:60.20:0,60,1323	0/0:14,0:14:39.10:0,39,789
chr10	109441714	.	A	ACAGG	11588.73	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=15.518;DP=576;FS=5.276;HRun=0;HaplotypeScore=142.9567;InbreedingCoeff=0.9660;MQ=76.57;MQ0=0;MQRankSum=-16.684;QD=52.68;ReadPosRankSum=-0.574;VQSLOD=5.5502;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,2020	0/0:5,0:5:15.02:0,15,257	0/0:23,0:23:63.21:0,63,1161	0/0:21,0:21:38.04:0,38,884	1/1:2,14:16:9.03:213,9,0	1/1:2,16:18:49.93:1040,50,0	1/1:9,18:27:66.22:1586,66,0	0/0:12,0:12:36.11:0,36,653	1/1:3,11:14:36.12:843,36,0	0/0:17,0:17:51.17:0,51,1001	0/0:9,0:9:27.09:0,27,537	1/1:10,20:30:90.29:2023,90,0	1/1:2,17:19:57.18:1318,57,0	1/1:5,23:28:78.27:1811,78,0	1/1:4,12:16:48.14:1094,48,0	0/0:23,0:23:63.20:0,63,1211	0/0:46,0:46:99:0,138,2704	0/0:34,0:34:99:0,102,1990	0/0:19,0:19:54.16:0,54,993	0/0:10,0:10:27.09:0,27,528	0/0:48,0:48:99:0,138,2678	1/1:5,6:11:8.99:190,9,0	1/1:2,6:8:6.02:144,6,0	1/1:7,13:20:25.02:509,25,0	1/1:4,9:13:36.12:818,36,0	0/0:16,0:16:48.16:0,48,952	0/0:27,0:27:81.28:0,81,1613	0/0:9,0:9:27.09:0,27,539
chr10	109441716	.	T	TC	4386.06	PASS	AB=0.500;AC=23;AF=0.411;AN=56;BaseQRankSum=16.989;DP=551;FS=0.000;HRun=1;HaplotypeScore=124.6191;InbreedingCoeff=0.9416;MQ=77.62;MQ0=0;MQRankSum=-16.666;QD=22.84;ReadPosRankSum=1.206;VQSLOD=4.7764;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1423	0/0:5,0:5:15.03:0,15,179	0/0:23,0:23:66.20:0,66,833	0/0:20,0:20:44.81:0,45,534	1/1:3,14:17:14.61:126,15,0	1/1:0,16:16:48.12:528,48,0	1/1:4,19:23:56.04:537,56,0	0/0:13,0:13:36.11:0,36,456	1/1:1,11:12:30.05:315,30,0	0/0:17,0:17:51.15:0,51,648	0/0:9,0:9:27.09:0,27,350	1/1:4,20:24:62.17:622,62,0	1/1:0,17:17:51.12:533,51,0	1/1:2,23:25:68.98:705,69,0	1/1:4,12:16:34.54:397,35,0	0/0:22,0:22:60.19:0,60,779	0/0:46,0:46:99:0,135,1753	0/0:34,0:34:99:0,102,1305	0/0:20,0:20:54.15:0,54,683	0/0:10,0:10:27.09:0,27,351	0/0:50,0:50:99:0,147,1888	1/1:0,8:8:12.09:117,12,0	0/1:0,6:6:2.57:33,0,3	1/1:1,15:16:26.55:234,27,0	1/1:3,9:12:17.23:240,17,0	0/0:16,0:16:48.16:0,48,623	0/0:27,0:27:81.25:0,81,1035	0/0:9,0:9:27.09:0,27,351
chr10	109444220	.	AT	A	8992.22	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=7.395;DP=669;FS=2.323;HRun=10;HaplotypeScore=92.5394;InbreedingCoeff=0.9984;MQ=68.46;MQ0=0;MQRankSum=0.137;QD=16.53;ReadPosRankSum=2.121;VQSLOD=5.3409;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,37:39:84.50:888,84,0	0/0:10,0:10:27.07:0,27,299	0/0:15,0:13:23.97:0,24,235	0/0:16,0:15:26.93:0,27,264	1/1:3,0:26:40.73:120,41,0	1/1:0,0:18:36.67:108,37,0	1/1:5,0:32:46.84:137,47,0	1/1:10,25:35:71.93:620,72,0	1/1:1,0:19:34.63:102,35,0	0/0:43,0:43:99:0,111,1173	0/0:23,0:23:63.16:0,63,688	1/1:3,24:27:26.80:461,27,0	1/1:1,18:19:47.99:416,48,0	1/1:4,19:23:44.99:391,45,0	1/1:2,14:16:35.99:313,36,0	0/0:18,0:18:51.14:0,51,564	1/1:1,30:31:86.98:755,87,0	1/1:2,23:25:53.99:469,54,0	1/1:5,21:26:59.95:517,60,0	1/1:3,17:20:50.94:436,51,0	1/1:2,18:20:47.99:417,48,0	1/1:1,20:21:56.99:494,57,0	1/1:4,25:29:53.78:469,54,0	1/1:2,22:24:56.99:495,57,0	1/1:1,0:32:57.04:167,57,0	1/1:5,21:27:37.82:542,38,0	1/1:3,21:24:53.97:469,54,0	1/1:1,10:11:23.98:208,24,0
chr10	109446623	.	TCC	T	6673.54	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.438;DP=736;FS=1.046;HRun=5;HaplotypeScore=99.9560;InbreedingCoeff=0.9998;MQ=75.89;MQ0=1;MQRankSum=-1.710;QD=36.47;ReadPosRankSum=4.226;VQSLOD=4.0576;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,111,2002	0/0:11,0:11:30.09:0,30,520	0/0:17,0:17:47.79:0,48,779	0/0:16,0:16:35.86:0,36,640	0/0:21,0:21:60.21:0,60,1090	0/0:25,0:25:72.24:0,72,1291	0/0:41,0:41:99:0,114,2032	0/0:22,0:22:60.20:0,60,1056	0/0:28,0:28:78.27:0,78,1404	0/0:22,0:22:60.19:0,60,1071	0/0:19,0:19:51.16:0,51,892	1/1:0,30:30:81.27:1133,81,0	1/1:1,25:26:72.24:1006,72,0	1/1:2,32:34:87.29:1218,87,0	1/1:0,30:30:84.28:1176,84,0	0/0:33,0:33:96.31:0,96,1687	0/0:35,0:35:99:0,105,1925	0/0:32,0:32:96.33:0,96,1737	0/0:21,0:21:57.18:0,57,1015	0/0:18,0:18:54.16:0,54,930	0/0:59,0:59:99:0,165,2903	1/1:0,24:24:63.21:882,63,0	1/1:2,15:17:42.14:588,42,0	1/1:1,21:22:48.16:672,48,0	0/0:16,0:16:45.15:0,45,805	0/0:25,0:25:72.23:0,72,1264	0/0:38,0:38:99:0,114,2029	0/0:11,0:11:33.11:0,33,578
chr10	109447133	.	G	GGTCCT	15140.62	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-13.177;DP=785;FS=3.211;HRun=0;HaplotypeScore=134.6421;InbreedingCoeff=0.9983;MQ=85.80;MQ0=0;MQRankSum=-5.755;QD=74.58;ReadPosRankSum=3.280;VQSLOD=6.2887;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.26:0,96,1858	0/0:11,0:11:30.10:0,30,618	0/0:25,0:25:69.01:0,69,1267	0/0:29,0:29:57.59:0,58,1373	0/0:16,0:16:48.16:0,48,993	0/0:25,0:25:72.25:0,72,1497	0/0:35,0:35:96.33:0,96,2003	0/0:23,0:23:60.17:0,60,1117	0/0:27,0:27:78.27:0,78,1625	0/0:26,0:26:66.23:0,66,1386	0/0:25,0:25:75.26:0,75,1548	1/1:3,37:45:99:3609,117,0	1/1:4,23:29:72.25:2179,72,0	1/1:5,34:42:99:3130,102,0	1/1:4,23:31:72.25:2190,72,0	0/0:33,0:33:93.31:0,93,1865	0/0:44,0:44:99:0,129,2634	0/0:17,0:17:51.10:0,51,987	0/0:20,0:20:48.16:0,48,994	0/0:19,0:19:51.18:0,51,1071	0/0:84,0:84:99:0,244,5037	1/1:1,17:20:42.14:1286,42,0	1/1:1,8:10:17.76:555,18,0	1/1:4,22:26:72.25:2191,72,0	0/0:13,0:13:33.11:0,33,682	0/0:40,0:40:99:0,102,2043	0/0:20,0:20:60.19:0,60,1209	0/0:16,0:16:45.15:0,45,945
chr10	109447514	.	T	TA	1907.75	PASS	AB=0.900;AC=23;AF=0.426;AN=54;BaseQRankSum=-4.698;DP=386;FS=0.000;HRun=14;HaplotypeScore=56.7444;InbreedingCoeff=0.4154;MQ=79.36;MQ0=3;MQRankSum=0.328;QD=8.29;ReadPosRankSum=-2.929;VQSLOD=1.6495;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:18:38.80:324,39,0	0/0:6,0:6:14.78:0,15,96	0/0:36,0:17:2.31:0,2,35	0/0:14,1:8:0.49:0,0,30	0/0:24,0:24:0.06:0,0,189	0/0:6,0:6:2.78:0,3,19	0/1:8,1:8:8.61:9,0,78	1/1:7,14:22:37.50:340,38,0	0/0:5,0:6:10.83:0,11,63	0/1:12,2:14:23.17:23,0,124	0/1:11,0:11:1.19:1,0,61	0/0:4,0:12:16.05:0,16,46	0/0:3,0:10:10.11:0,10,29	0/0:2,0:9:12.21:0,12,35	0/0:7,0:14:10.13:0,10,29	0/0:8,0:8:8.79:0,9,58	1/1:10,29:39:37.21:432,37,0	1/1:4,11:15:21.46:183,21,0	1/1:12,4:16:7.45:156,7,0	1/1:9,1:10:2.99:24,3,0	0/1:3,1:4:10.28:41,0,10	./.	0/0:1,0:4:4.05:0,4,12	0/0:3,0:5:5.89:0,6,17	0/1:11,1:12:15.25:15,0,60	1/1:13,3:24:20.66:157,21,0	1/1:3,11:14:2.62:141,3,0	1/1:6,15:21:29.68:239,30,0
chr10	109447855	.	A	AG	8151.88	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-6.762;DP=756;FS=3.627;HRun=1;HaplotypeScore=84.5332;InbreedingCoeff=0.9967;MQ=80.18;MQ0=1;MQRankSum=-1.135;QD=40.76;ReadPosRankSum=4.923;VQSLOD=5.2955;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,1558	0/0:6,0:6:15.04:0,15,181	0/0:16,0:16:31.47:0,31,454	0/0:22,0:22:63:0,63,749	0/0:16,0:16:42.03:0,42,492	0/0:26,0:26:69.60:0,70,857	0/0:37,0:37:99:0,111,1413	0/0:24,0:24:72.22:0,72,912	0/0:18,0:18:51.17:0,51,661	0/0:25,0:25:63.19:0,63,794	0/0:20,0:20:48.09:0,48,588	1/1:0,40:40:99:1753,117,0	1/1:0,31:31:84.28:1258,84,0	1/1:1,35:36:99:1528,102,0	1/1:0,34:34:93.32:1393,93,0	0/0:34,0:34:99:0,99,1269	0/0:41,0:41:99:0,120,1544	0/0:41,0:41:99:0,120,1525	0/0:28,0:28:84.24:0,84,1042	0/0:12,0:12:30.04:0,30,356	0/0:67,0:66:99:0,184,2303	1/1:0,16:16:39.06:557,39,0	1/1:0,12:12:27.09:404,27,0	1/1:0,31:31:84.28:1258,84,0	0/0:18,0:18:51.16:0,51,648	0/0:26,0:26:78.24:0,78,988	0/0:20,0:20:60.16:0,60,760	0/0:15,0:15:39.12:0,39,506
chr10	109448062	.	TG	T	1269.01	PASS	AB=0.918;AC=12;AF=0.214;AN=56;BaseQRankSum=0.493;DP=552;FS=1.857;HRun=10;HaplotypeScore=92.4540;InbreedingCoeff=0.7137;MQ=75.43;MQ0=0;MQRankSum=0.081;QD=10.75;ReadPosRankSum=2.322;VQSLOD=3.1891;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,3:42:38.98:0,39,625	0/0:9,0:9:15.01:0,15,149	0/0:16,0:16:15.32:0,15,180	0/0:21,0:18:30.73:0,31,235	1/1:10,7:17:24.42:202,24,0	1/1:3,10:13:29.99:260,30,0	1/1:9,20:29:59.97:517,60,0	0/0:25,1:26:0.96:0,1,213	1/1:2,10:12:29.99:260,30,0	0/0:21,0:21:33.07:0,33,350	0/1:15,1:16:2:2,0,200	0/0:26,1:27:21.91:0,22,390	0/0:15,0:15:30.07:0,30,324	0/0:21,0:22:48.09:0,48,504	0/0:30,0:30:60.16:0,60,664	0/0:24,0:24:51.13:0,51,556	0/0:25,0:25:56.99:0,57,594	0/0:19,0:19:30.08:0,30,332	0/0:14,0:14:23.98:0,24,239	0/0:18,0:18:24.41:0,24,228	0/0:18,1:19:1.01:0,1,232	0/0:22,0:22:27.07:0,27,298	0/0:13,0:13:15.04:0,15,159	0/0:23,1:24:28.05:0,28,513	1/1:8,6:14:20.98:180,21,0	0/0:16,0:16:21:0,21,211	0/1:15,2:16:22.03:22,0,233	0/0:11,0:11:5.99:0,6,55
chr10	109448325	.	GTCTGTCTGTC	G	5131.30	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=12.201;DP=587;FS=0.839;HRun=0;HaplotypeScore=218.9434;InbreedingCoeff=0.2860;MQ=60.63;MQ0=7;MQRankSum=-5.942;QD=12.96;ReadPosRankSum=8.549;VQSLOD=2.9152;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:13.58:97,14,0	0/0:8,0:8:24.08:0,24,864	0/0:33,0:18:35.93:0,36,969	0/0:38,0:24:9.35:0,9,659	1/1:13,0:11:30.09:419,30,0	1/1:4,10:14:12.04:242,12,0	1/1:10,2:12:18.06:282,18,0	0/0:33,0:32:12.40:0,12,216	1/1:24,3:27:72.62:1108,73,0	0/0:16,0:16:45.09:0,45,1199	0/0:17,0:17:48.16:0,48,1449	1/1:20,0:20:7.36:245,7,0	0/1:28,0:28:67.86:167,0,68	1/1:30,0:30:17.79:271,18,0	1/1:25,0:25:20.45:338,20,0	0/0:32,0:32:90.31:0,90,2913	0/1:14,0:13:29.16:51,0,29	0/1:15,0:15:30.43:134,0,30	0/1:17,0:17:84.50:84,0,86	0/1:13,0:13:17.36:65,0,17	0/1:41,0:38:56.99:57,0,96	1/1:17,0:17:26.50:213,27,0	0/1:15,0:15:33.14:87,0,33	0/0:14,0:12:0.87:0,1,20	1/1:14,1:14:36.11:592,36,0	0/1:21,0:21:84.79:161,0,85	1/1:26,0:26:55.67:461,56,0	0/1:9,0:9:13.81:56,0,14
chr10	109448327	.	CTGTCTG	C	5143.26	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=12.354;DP=591;FS=1.882;HRun=0;HaplotypeScore=185.5778;InbreedingCoeff=0.2948;MQ=60.24;MQ0=7;MQRankSum=-6.284;QD=11.96;ReadPosRankSum=8.707;VQSLOD=3.2931;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:9.72:107,10,0	0/0:8,0:8:24.08:0,24,636	0/0:33,0:18:36.05:0,36,882	0/0:40,0:24:9.27:0,9,566	1/1:11,2:11:30.02:366,30,0	1/1:11,3:13:12.04:164,12,0	1/1:12,0:12:15.52:225,16,0	0/1:34,0:33:22.29:22,0,216	1/1:24,2:27:72.18:905,72,0	0/0:16,0:16:34.70:0,35,959	0/0:18,0:18:51.17:0,51,1171	1/1:20,0:20:34.80:332,35,0	0/1:29,0:29:37.29:288,0,37	1/1:28,0:28:24.91:315,25,0	1/1:26,0:26:32.92:325,33,0	0/0:32,0:32:90.31:0,90,2288	0/1:13,0:12:19.44:81,0,19	0/1:15,0:15:30.40:162,0,30	0/1:18,0:18:51.15:51,0,86	0/1:15,0:15:4:89,0,4	0/1:41,0:38:71.11:74,0,71	1/1:17,0:17:25.62:196,26,0	1/1:15,0:15:7.40:63,7,0	0/0:14,0:12:1.81:0,2,22	1/1:13,1:13:36.10:500,36,0	0/1:21,0:21:74.38:186,0,74	1/1:27,0:27:57.91:596,58,0	0/1:9,0:9:12.11:99,0,12
chr10	109448329	.	GTCTGTCTC	G	12332.13	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=5.952;DP=597;FS=6.950;HRun=0;HaplotypeScore=182.9663;InbreedingCoeff=0.9504;MQ=58.95;MQ0=7;MQRankSum=-5.875;QD=27.47;ReadPosRankSum=3.632;VQSLOD=4.0544;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,3:23:29.98:476,30,0	0/0:10,0:10:30.03:0,30,725	0/0:32,0:17:38.06:0,38,515	0/0:40,0:24:5.97:0,6,316	1/1:14,0:12:28.60:182,29,0	1/1:15,0:14:11.86:115,12,0	1/1:13,0:13:10.92:106,11,0	1/1:8,26:33:55.81:585,56,0	1/1:28,0:28:70.83:474,71,0	0/0:16,0:16:41.81:0,42,872	0/0:18,0:18:51.05:0,51,1068	1/1:12,9:21:50.89:1006,51,0	1/1:25,4:30:71.77:1072,72,0	1/1:18,10:28:51.02:967,51,0	1/1:19,8:27:48.01:962,48,0	0/0:32,0:32:90.12:0,90,2146	1/1:9,4:12:29.82:375,30,0	1/1:11,5:16:32.92:612,33,0	1/1:14,0:16:25.62:298,26,0	1/1:15,0:15:26.80:364,27,0	1/1:37,2:37:56.52:620,57,0	1/1:13,4:17:38.99:660,39,0	1/1:10,5:15:29.95:360,30,0	1/1:14,0:12:9:87,9,0	1/1:15,0:14:32.73:252,33,0	1/1:14,6:20:49.37:825,49,0	1/1:14,12:26:63.15:1582,63,0	1/1:5,4:9:20.98:353,21,0
chr10	109448333	.	GTC	G	983.81	PASS	AB=0.985;AC=30;AF=0.536;AN=56;BaseQRankSum=8.861;DP=589;FS=26.398;HRun=0;HaplotypeScore=177.1427;InbreedingCoeff=0.0587;MQ=54.97;MQ0=7;MQRankSum=-4.961;QD=2.28;ReadPosRankSum=6.548;VQSLOD=0.7667;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:10.97:30,0,11	0/1:10,0:10:10.10:10,0,274	0/0:31,0:16:2.54:0,3,40	0/0:37,0:21:2.87:0,3,30	0/1:15,0:12:0.01:0,0,0	1/1:16,0:15:2.78:15,3,0	0/0:13,0:13:1.98:0,2,18	0/1:30,1:30:5.35:5,0,100	0/0:27,0:27:3.74:0,4,23	0/1:13,2:15:38.28:38,0,296	0/0:18,0:18:21.06:0,21,299	1/1:20,0:20:27.86:146,28,0	0/1:27,0:28:15.72:79,0,16	1/1:29,0:29:12.14:91,12,0	1/1:28,0:27:7.01:113,7,0	0/0:29,3:32:19.91:0,20,672	0/1:13,0:12:9.96:18,0,10	0/1:16,0:16:8.31:58,0,8	0/1:16,0:16:22.87:23,0,25	1/1:17,0:17:4.55:30,5,0	0/1:36,1:35:14.69:15,0,32	1/1:19,0:19:13.45:77,13,0	0/1:15,0:15:4.77:5,0,30	0/1:13,0:11:0:0,0,0	0/1:13,0:12:0:0,0,0	0/1:18,0:18:1.17:84,0,1	1/1:28,0:28:46.70:273,47,0	1/1:8,0:8:6.53:27,7,0
chr10	109448402	.	A	ACACACACACACACACG	24922.07	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-0.385;DP=660;FS=4.074;HRun=0;HaplotypeScore=264.3281;InbreedingCoeff=0.6571;MQ=49.90;MQ0=6;MQRankSum=-10.930;QD=50.15;ReadPosRankSum=2.900;VQSLOD=4.1740;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,14:37:16.05:1634,16,0	0/0:9,0:9:21.07:0,21,867	0/0:32,0:20:46.24:0,46,1068	0/0:36,0:24:54.17:0,54,1452	1/1:13,0:12:0.28:1,0,0	0/1:21,0:20:16.64:826,0,17	0/1:15,0:15:0:0,0,0	1/1:26,0:38:79.82:2720,80,0	0/1:21,0:21:3.13:492,0,3	0/0:36,0:35:84.27:0,84,3132	0/0:20,0:20:54.14:0,54,1879	1/1:17,0:17:9.01:561,9,0	1/1:22,0:21:36.08:1889,36,0	1/1:24,0:23:3:205,3,0	1/1:24,0:23:12.04:728,12,0	0/0:30,0:30:71.85:0,72,2596	1/1:9,5:21:18.06:1023,18,0	1/1:4,3:12:9.03:528,9,0	1/1:13,4:27:62.96:2384,63,0	1/1:6,4:17:15.05:1093,15,0	1/1:13,0:28:3.01:230,3,0	1/1:21,0:19:12.04:722,12,0	1/1:14,0:12:8.99:364,9,0	1/1:14,0:12:5.98:76,6,0	1/1:9,0:8:2.95:111,3,0	1/1:15,8:34:65.64:3463,66,0	1/1:24,12:45:63.05:4409,63,0	1/1:5,4:13:21.07:1463,21,0
chr10	109448404	.	A	ACACACACACACACACACACACGCG	20690.09	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=10.127;DP=754;FS=10.383;HRun=0;HaplotypeScore=344.3324;InbreedingCoeff=0.6260;MQ=49.93;MQ0=6;MQRankSum=-13.027;QD=35.13;ReadPosRankSum=4.983;VQSLOD=1.3524;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:27.05:1038,27,0	0/0:8,0:8:21.07:0,21,1178	0/0:32,0:20:49.28:0,49,1339	0/0:37,0:25:59.92:0,60,1833	1/1:6,0:15:0.46:2,0,0	1/1:21,0:20:17.93:999,18,0	1/1:5,0:14:0.47:1,0,0	1/1:40,0:37:56.39:2066,56,0	1/1:22,0:22:8.77:592,9,0	0/0:36,0:35:84.29:0,84,4258	0/0:20,0:20:54.17:0,54,2511	1/1:9,0:38:9.01:810,9,0	1/1:18,0:31:36.55:2722,37,0	1/1:15,0:38:5.99:289,6,0	1/1:16,0:35:12.04:1193,12,0	0/0:32,0:32:74.89:0,75,3651	0/1:24,0:23:41.89:618,0,42	1/1:14,0:13:9.03:325,9,0	0/1:30,0:28:24.09:1523,0,24	1/1:16,0:16:15.05:625,15,0	1/1:31,0:28:3.01:136,3,0	1/1:15,6:35:12.04:1139,12,0	1/1:12,0:15:8.52:597,9,0	1/1:10,3:19:2.80:46,3,0	1/1:8,0:15:3.01:144,3,0	1/1:33,0:33:26.02:2197,26,0	1/1:44,0:44:41.24:2715,41,0	1/1:13,0:13:21.07:914,21,0
chr10	109448410	.	A	ACACACACACACGCACACA	20728.52	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=9.320;DP=753;FS=7.193;HRun=0;HaplotypeScore=296.1490;InbreedingCoeff=0.5662;MQ=50.24;MQ0=3;MQRankSum=-12.260;QD=35.01;ReadPosRankSum=2.062;VQSLOD=2.6916;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:23.23:1235,23,0	0/0:8,0:8:21.07:0,21,940	0/0:32,0:22:49.40:0,49,1068	0/0:30,0:24:59.92:0,60,1561	1/1:17,0:16:0.75:1,1,0	1/1:19,0:18:29.94:1262,30,0	1/1:17,0:17:0.47:1,0,0	1/1:36,0:33:6.50:1925,6,0	1/1:15,7:24:14.94:764,15,0	0/0:39,0:38:84.27:0,84,3414	0/0:19,0:19:54.09:0,54,2016	1/1:39,0:39:9.01:598,9,0	1/1:32,0:31:36.49:1969,36,0	1/1:38,0:37:6.94:224,7,0	1/1:38,0:37:12.98:788,13,0	0/0:32,0:32:74.84:0,75,2859	0/1:22,0:21:41.82:765,0,42	1/1:15,0:14:9.03:381,9,0	0/1:29,0:28:77.25:1591,0,77	1/1:19,0:19:15.05:785,15,0	1/1:27,0:25:3.01:168,3,0	1/1:38,0:36:12.51:755,13,0	1/1:19,0:17:9.33:385,9,0	1/1:20,0:18:5.91:64,6,0	1/1:16,0:15:2.97:181,3,0	0/1:36,0:36:51.17:2469,0,51	1/1:43,0:43:41.27:3309,41,0	1/1:16,0:16:21.07:1109,21,0
chr10	109449065	.	G	GCACAGAACA	56566.16	PASS	AB=0.564;AC=43;AF=0.768;AN=56;BaseQRankSum=-9.232;DP=699;FS=3.317;HRun=0;HaplotypeScore=154.7288;InbreedingCoeff=0.8821;MQ=70.38;MQ0=0;MQRankSum=-15.437;QD=98.55;ReadPosRankSum=0.611;VQSLOD=5.4552;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,23:36:84.28:3650,84,0	0/0:12,0:12:36.10:0,36,1032	0/0:22,0:22:55.69:0,56,1342	0/0:18,0:18:42.10:0,42,973	1/1:5,15:22:54.19:2427,54,0	1/1:3,19:26:63.22:3053,63,0	1/1:7,17:33:72.25:3066,72,0	1/1:11,11:32:84.25:3321,84,0	1/1:6,12:22:51.17:2109,51,0	0/0:28,0:28:84.24:0,84,2313	0/0:15,0:15:45.15:0,45,1324	1/1:2,15:31:54.18:2401,54,0	1/1:5,17:26:57.20:2676,57,0	1/1:5,19:33:63.19:2729,63,0	1/1:5,26:38:87.14:4018,87,0	0/0:30,0:30:84.24:0,84,2500	1/1:8,19:31:78.26:3033,78,0	1/1:4,9:14:36.12:1617,36,0	1/1:9,5:18:48.16:2118,48,0	1/1:6,19:28:72.25:3100,72,0	1/1:9,10:27:45.15:1811,45,0	1/1:6,19:30:69.24:3109,69,0	1/1:2,13:17:38.94:1798,39,0	1/1:1,12:16:27.09:1196,27,0	1/1:5,15:22:60.20:2495,60,0	0/1:7,16:31:7.64:3122,0,8	1/1:5,23:34:78.74:3574,79,0	1/1:1,1:7:3.01:145,3,0
chr10	109452420	.	G	GTTT	1232.83	PASS	AB=0.600;AC=13;AF=0.232;AN=56;BaseQRankSum=9.805;DP=592;FS=2.234;HRun=0;HaplotypeScore=112.9276;InbreedingCoeff=0.8855;MQ=75.48;MQ0=0;MQRankSum=-1.358;QD=8.74;ReadPosRankSum=1.434;VQSLOD=3.1252;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,1826	0/0:6,0:6:18.06:0,18,316	0/0:33,0:24:68.46:0,68,859	0/0:19,0:13:35.81:0,36,502	0/0:23,0:23:60:0,60,998	0/0:19,0:19:57.20:0,57,1016	0/0:21,0:21:60.21:0,60,1086	0/0:24,0:24:66.11:0,66,1001	0/0:15,0:15:45.13:0,45,748	0/0:28,0:28:78.25:0,78,1361	0/0:13,0:13:39.12:0,39,667	1/1:2,1:22:27.04:214,27,0	0/1:5,0:15:23.86:50,0,24	1/1:8,0:23:10.04:166,10,0	1/1:4,2:27:41.42:383,41,0	0/0:14,0:14:39.11:0,39,640	0/0:37,0:37:99:0,105,1820	0/0:21,0:21:63.11:0,63,951	0/0:16,0:16:48.14:0,48,817	0/0:12,0:12:30.10:0,30,510	0/0:26,0:26:70.73:0,71,1097	1/1:3,1:23:29.54:302,30,0	1/1:2,0:10:16.57:120,17,0	1/1:3,1:21:21.71:186,22,0	0/0:14,0:14:42.12:0,42,684	0/0:33,0:33:94.88:0,95,1666	0/0:29,0:29:84.26:0,84,1423	0/0:9,0:9:27.09:0,27,495
chr10	109454173	.	CAA	C	10533.01	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=3.023;DP=628;FS=18.830;HRun=12;HaplotypeScore=83.0779;InbreedingCoeff=0.9087;MQ=70.47;MQ0=1;MQRankSum=-0.935;QD=19.80;ReadPosRankSum=6.525;VQSLOD=2.0895;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,39:49:64.15:911,64,0	0/0:5,0:5:15.04:0,15,206	0/0:15,0:13:21.06:0,21,287	0/0:7,0:7:3.01:0,3,45	1/1:8,19:27:42:427,42,0	1/1:1,19:21:50.85:500,51,0	1/1:2,31:34:59.19:799,59,0	1/1:6,19:26:47.54:492,48,0	1/1:1,24:25:53.74:531,54,0	0/0:22,0:22:38.60:0,39,506	0/0:12,0:12:27.07:0,27,355	1/1:8,24:33:56.83:561,57,0	1/1:6,15:22:38.48:359,38,0	1/1:1,23:24:63.13:641,63,0	1/1:5,24:29:66.12:671,66,0	0/0:34,0:34:81.21:0,81,1118	1/1:11,29:41:84.71:844,85,0	1/1:4,7:12:15.25:153,15,0	1/1:2,14:16:36.03:362,36,0	1/1:2,5:8:8.75:144,9,0	1/1:6,29:37:61.56:691,62,0	1/1:4,11:15:27.03:275,27,0	1/1:2,6:8:15.03:153,15,0	1/1:3,32:36:74.87:815,75,0	1/1:6,6:12:9.01:92,9,0	1/1:6,16:22:6.40:443,6,0	1/1:4,21:25:47.64:488,48,0	1/1:3,6:9:17.98:183,18,0
chr10	109454468	.	G	GA	2303.85	PASS	AB=0.747;AC=39;AF=0.722;AN=54;BaseQRankSum=2.869;DP=320;FS=0.780;HRun=13;HaplotypeScore=62.8781;InbreedingCoeff=0.2060;MQ=49.70;MQ0=9;MQRankSum=-2.130;QD=8.08;ReadPosRankSum=0.322;VQSLOD=2.5029;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:13:18.02:166,18,0	0/0:1,0:1:2.98:0,3,21	./.	0/0:5,0:3:3.79:0,4,36	1/1:14,2:26:34.45:196,34,0	1/1:11,0:14:20:104,20,0	1/1:15,0:16:14.64:72,15,0	1/1:6,11:16:9.33:156,9,0	1/1:5,0:6:5.29:29,5,0	0/0:13,1:12:2.19:0,2,155	0/1:8,1:8:9.93:10,0,69	1/1:9,6:15:20.77:169,21,0	1/1:4,3:7:6:55,6,0	1/1:6,4:10:20.90:175,21,0	1/1:4,3:6:11.99:104,12,0	0/0:10,0:10:7.21:0,7,107	1/1:7,13:20:15.47:283,15,0	1/1:5,7:13:0.28:132,0,0	0/1:8,6:12:1.49:106,0,1	1/1:5,2:7:8.85:70,9,0	0/1:9,4:14:2.65:101,0,3	1/1:3,3:6:9.01:84,9,0	0/1:2,5:7:12.27:45,0,12	1/1:10,5:16:22.37:163,22,0	1/1:4,0:8:5.68:29,6,0	0/1:9,5:14:2.73:108,0,3	0/1:10,4:13:14.78:22,0,15	0/1:5,2:5:6.20:75,0,6
chr10	109454507	.	CGG	C	382.43	PASS	AB=0.838;AC=11;AF=0.212;AN=52;BaseQRankSum=-1.636;DP=157;FS=21.867;HRun=11;HaplotypeScore=37.5941;InbreedingCoeff=0.3438;MQ=63.87;MQ0=0;MQRankSum=1.301;QD=10.62;ReadPosRankSum=1.755;VQSLOD=0.1783;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:2.99:0,3,24	./.	0/0:7,0:4:6.36:0,6,64	0/0:2,0:2:4.35:0,4,17	0/0:7,0:7:3:0,3,29	0/0:8,0:8:11.22:0,11,93	0/0:8,0:8:8.98:0,9,73	0/0:6,0:8:4.99:0,5,17	0/0:3,0:4:8.99:0,9,77	0/0:10,0:10:6.02:0,6,92	0/0:2,0:2:2.50:0,2,9	1/1:2,3:5:15.03:156,15,0	1/1:1,3:4:9.02:96,9,0	0/1:6,2:8:4.75:109,0,5	0/1:3,2:5:31.06:52,0,31	0/0:4,0:4:12.02:0,12,139	0/0:11,0:12:27.51:0,28,154	0/0:7,0:8:13.97:0,14,91	0/0:4,0:6:4.87:0,5,17	0/0:4,0:4:4.72:0,5,16	0/0:9,0:9:12.48:0,12,44	1/1:2,2:4:6.01:63,6,0	1/1:1,1:3:3.01:32,3,0	0/1:7,0:7:19.01:19,0,55	0/0:4,0:4:5.96:0,6,44	0/0:5,0:5:5.49:0,5,35	0/0:4,0:4:8.46:0,8,54	./.
chr10	109454509	.	G	GA	378.21	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=-2.217;DP=163;FS=2.119;HRun=0;HaplotypeScore=45.1911;InbreedingCoeff=0.6515;MQ=62.71;MQ0=0;MQRankSum=-2.208;QD=12.20;ReadPosRankSum=-0.174;VQSLOD=3.8914;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:8.97:0,9,73	./.	0/0:8,0:4:0.58:0,1,27	0/0:2,0:2:0.88:0,1,25	1/1:5,1:6:8.95:67,9,0	1/1:1,6:8:7.92:120,8,0	1/1:2,6:8:14.95:164,15,0	0/0:8,0:8:14.91:0,15,113	1/1:2,2:5:11.76:113,12,0	0/0:9,0:9:15.01:0,15,158	0/0:1,0:1:2.98:0,3,21	0/0:5,0:5:14.50:0,15,87	0/0:4,0:4:8.87:0,9,58	0/0:9,0:9:16.67:0,17,111	0/0:6,0:6:11.89:0,12,85	0/0:4,0:4:12.01:0,12,124	0/0:12,0:12:34.75:0,35,246	0/0:8,0:8:20.89:0,21,159	0/0:6,0:6:14.94:0,15,117	0/0:6,0:6:5.95:0,6,43	0/0:9,0:9:20.91:0,21,170	0/0:4,0:4:5.92:0,6,39	0/0:3,0:3:2.96:0,3,19	0/0:8,0:8:13.50:0,13,94	1/1:2,2:4:7.76:63,8,0	0/0:5,0:5:8.16:0,8,54	0/0:6,0:6:8.95:0,9,66	./.
chr10	109454517	.	GGT	G	290.30	PASS	AB=0.934;AC=19;AF=0.352;AN=54;BaseQRankSum=3.343;DP=155;FS=5.349;HRun=0;HaplotypeScore=32.0730;InbreedingCoeff=0.0379;MQ=66.82;MQ0=0;MQRankSum=-0.430;QD=3.63;ReadPosRankSum=3.479;VQSLOD=0.1927;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:1.47:6,1,0	0/0:1,0:1:2.97:0,3,20	0/0:7,0:4:8.45:0,8,62	0/1:2,0:2:0.16:0,0,19	0/0:4,0:4:5.99:0,6,49	0/0:11,0:11:18.28:0,18,145	0/0:9,0:9:23.64:0,24,196	0/0:5,0:5:0.19:0,0,6	0/0:5,0:5:5.52:0,6,38	0/0:4,0:4:6.02:0,6,75	1/1:1,0:1:1.55:4,2,0	0/1:6,1:7:23.51:77,0,24	0/1:5,1:6:11.51:46,0,12	1/1:8,2:10:4.17:118,4,0	0/1:6,0:6:14.88:23,0,15	0/0:5,0:5:14.08:0,14,76	0/1:10,0:10:3.71:4,0,19	0/0:8,0:8:13.70:0,14,129	0/0:3,0:3:5.09:0,5,19	1/1:5,0:5:3.25:16,3,0	0/1:9,0:9:10.82:11,0,20	0/1:3,1:4:14.75:39,0,15	1/1:3,0:3:3.01:30,3,0	0/1:6,1:7:33.35:33,0,52	0/0:4,0:4:6.94:0,7,35	0/1:7,0:7:11.50:25,0,12	0/0:6,0:6:6.94:0,7,91	./.
chr10	109454518	.	GT	G	450.78	PASS	AB=0.919;AC=24;AF=0.444;AN=54;BaseQRankSum=2.471;DP=158;FS=1.682;HRun=1;HaplotypeScore=29.5087;InbreedingCoeff=0.0306;MQ=66.57;MQ0=0;MQRankSum=1.382;QD=4.25;ReadPosRankSum=4.943;VQSLOD=0.5870;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:1.72:7,2,0	0/0:1,0:1:2.97:0,3,20	0/0:7,0:4:8.12:0,8,45	0/0:2,0:2:2.99:0,3,24	0/0:3,0:3:5.79:0,6,37	0/0:11,0:11:12.79:0,13,108	0/0:10,0:10:25.90:0,26,182	1/1:4,1:5:4.55:30,5,0	0/1:5,0:5:5.10:6,0,5	0/0:3,1:4:5.98:0,6,48	1/1:0,1:1:3:26,3,0	0/1:7,0:7:8.12:8,0,31	0/1:6,0:6:6.95:7,0,18	0/1:10,0:10:1.47:62,0,1	0/0:6,0:6:1.57:0,2,20	0/0:5,0:5:4.32:0,4,30	1/1:7,4:11:19.32:135,19,0	0/1:7,1:8:23.77:24,0,53	0/1:4,0:4:3.08:4,0,3	1/1:3,2:5:8.71:61,9,0	0/1:5,4:9:9.48:90,0,9	0/1:5,0:5:8.67:9,0,40	1/1:3,0:3:2.84:14,3,0	0/1:7,0:7:34.69:35,0,35	0/1:4,0:4:3.89:4,0,7	0/1:5,2:7:6.75:64,0,7	0/1:3,3:6:14.69:15,0,59	./.
chr10	109456584	.	C	CG	2549.59	PASS	AB=0.765;AC=28;AF=0.500;AN=56;BaseQRankSum=3.445;DP=416;FS=23.845;HRun=9;HaplotypeScore=71.7882;InbreedingCoeff=0.2875;MQ=80.82;MQ0=0;MQRankSum=-1.167;QD=8.20;ReadPosRankSum=-0.426;VQSLOD=0.2376;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,16:29:18.48:186,18,0	0/0:5,0:5:12:0,12,104	0/1:12,0:12:19.39:19,0,39	0/1:14,0:13:11.90:12,0,68	0/0:5,0:5:9:0,9,78	0/0:9,0:9:11.97:0,12,104	0/0:29,0:29:69.41:0,69,600	0/1:9,4:13:17.03:57,0,17	0/0:18,0:18:29.95:0,30,260	0/0:16,0:16:32.98:0,33,285	0/0:4,0:4:12:0,12,104	1/1:9,9:18:17.96:172,18,0	1/1:4,8:12:10.27:102,10,0	0/1:7,13:20:28.95:149,0,29	1/1:6,8:14:17.89:160,18,0	0/0:11,0:11:29.97:0,30,257	1/1:6,24:30:40.31:421,40,0	0/1:4,13:18:3.52:146,0,4	1/1:3,5:8:15.04:166,15,0	0/1:5,1:6:20.04:27,0,20	0/1:27,11:38:12.99:308,0,13	0/1:3,6:9:30.77:145,0,31	0/1:3,1:4:3.35:28,0,3	1/1:9,18:27:14.99:152,15,0	0/0:8,0:8:11.97:0,12,104	0/1:8,7:15:28.07:163,0,28	1/1:0,17:17:22.91:263,23,0	1/1:5,2:7:6.02:66,6,0
chr10	109458119	.	GC	G	21256.57	PASS	AB=0.529;AC=43;AF=0.768;AN=56;BaseQRankSum=11.148;DP=712;FS=3.006;HRun=1;HaplotypeScore=88.3848;InbreedingCoeff=0.8982;MQ=91.96;MQ0=0;MQRankSum=-8.735;QD=37.10;ReadPosRankSum=4.671;VQSLOD=5.3045;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,48:48:99:1796,129,0	0/0:10,0:10:30.10:0,30,478	0/0:29,0:29:84.22:0,84,1245	0/0:27,0:27:70.06:0,70,1030	1/1:1,17:18:48.16:667,48,0	1/1:0,15:15:45.15:629,45,0	1/1:0,17:17:45.15:629,45,0	1/1:0,24:24:72.19:937,72,0	1/1:0,23:23:69.23:963,69,0	0/0:25,0:25:75.23:0,75,1106	0/0:15,0:15:45.15:0,45,716	1/1:0,33:33:84.28:1174,84,0	1/1:0,24:24:57.19:795,57,0	1/1:0,34:34:93.31:1299,93,0	1/1:0,30:30:78.26:1090,78,0	0/0:33,0:33:99:0,99,1536	1/1:0,26:26:75.25:1048,75,0	1/1:0,27:27:75.25:1049,75,0	1/1:0,19:19:57.12:748,57,0	1/1:1,18:19:52.73:717,53,0	1/1:0,54:54:99:1922,138,0	1/1:0,21:21:57.19:796,57,0	1/1:0,19:19:48.16:671,48,0	1/1:0,38:38:96.32:1341,96,0	1/1:0,25:25:63.21:880,63,0	0/1:3,24:27:60.82:906,0,61	1/1:0,25:25:69.22:950,69,0	1/1:0,7:7:18.06:251,18,0
chr10	109458826	.	TC	T	2458.58	PASS	AB=0.958;AC=32;AF=0.571;AN=56;BaseQRankSum=-1.303;DP=481;FS=5.493;HRun=4;HaplotypeScore=42.7529;InbreedingCoeff=0.7421;MQ=56.46;MQ0=66;MQRankSum=-1.240;QD=10.42;ReadPosRankSum=0.727;VQSLOD=0.6998;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:35.73:267,36,0	0/0:12,0:12:32.77:0,33,319	0/0:70,0:7:8.68:0,9,62	0/0:79,0:9:6.80:0,7,117	0/0:17,0:13:11.34:0,11,79	0/0:12,0:10:21.04:0,21,221	0/0:13,0:10:17.90:0,18,150	1/1:22,1:22:44.64:337,45,0	0/0:7,0:5:5.95:0,6,51	0/0:9,0:9:20.45:0,20,159	0/0:9,0:9:14.92:0,15,134	1/1:8,1:8:9.47:78,9,0	1/1:9,0:8:8.99:73,9,0	1/1:9,0:9:23.98:205,24,0	1/1:7,1:7:6.01:59,6,0	0/0:7,0:7:14.93:0,15,134	1/1:16,0:16:14.92:119,15,0	1/1:18,0:16:26.84:206,27,0	1/1:14,0:12:22.91:212,23,0	0/1:15,0:15:16.42:130,0,16	1/1:4,12:15:3.01:30,3,0	1/1:7,2:9:11.49:73,11,0	0/1:10,1:11:26.40:72,0,26	1/1:21,1:22:25.09:197,25,0	0/0:9,0:9:17.95:0,18,158	1/1:15,0:15:37.79:321,38,0	1/1:11,1:9:20.87:169,21,0	1/1:10,0:8:15.79:122,16,0
chr10	109458829	.	CCA	C	2299.18	PASS	AB=0.922;AC=23;AF=0.411;AN=56;BaseQRankSum=-2.074;DP=524;FS=25.283;HRun=0;HaplotypeScore=47.2856;InbreedingCoeff=0.1675;MQ=57.52;MQ0=65;MQRankSum=-0.790;QD=8.55;ReadPosRankSum=5.008;VQSLOD=1.5316;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:22,3:26:24.46:287,24,0	0/0:12,0:12:32.99:0,33,411	0/0:71,0:7:11.70:0,12,120	0/0:80,0:10:14.48:0,14,151	0/0:18,0:14:21.40:0,21,134	0/0:12,0:10:21.05:0,21,292	0/0:15,0:12:29.29:0,29,223	1/1:19,1:21:47.63:350,48,0	0/0:9,0:7:8.87:0,9,66	0/0:10,0:10:23.40:0,23,202	0/0:9,0:9:18.78:0,19,170	0/1:11,0:10:38.41:56,0,38	0/1:9,0:8:19.73:58,0,20	0/1:12,0:12:23.22:169,0,23	0/1:7,0:11:23.68:25,0,24	0/0:10,0:10:23.82:0,24,221	1/1:13,3:17:14.72:153,15,0	0/1:15,3:16:7.10:200,0,7	1/1:12,1:12:3.57:188,4,0	0/1:2,12:16:16.46:178,0,16	0/1:19,1:19:1.73:2,0,14	0/1:11,0:11:33.17:38,0,33	0/1:12,0:12:14.70:15,0,104	0/1:27,1:28:99:111,0,124	0/0:9,0:9:17.96:0,18,186	1/1:14,3:17:42.95:361,43,0	1/1:9,2:11:3.73:174,4,0	0/1:8,1:8:13.10:118,0,13
chr10	109459096	.	A	AGAGCAATCAGTGCTCTTAACCGCT	12413.65	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-5.720;DP=605;FS=15.788;HRun=0;HaplotypeScore=337.1198;InbreedingCoeff=0.8838;MQ=56.78;MQ0=8;MQRankSum=-10.807;QD=94.04;ReadPosRankSum=-0.759;VQSLOD=3.3037;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:46,0:46:99:138,0,4953	0/0:9,0:9:27.08:0,27,1197	0/0:22,0:11:30.10:0,30,1442	0/0:29,0:20:57.15:0,57,2625	1/1:9,2:15:17.89:1667,18,0	1/1:7,7:16:30.10:3056,30,0	1/1:12,0:11:23.90:1078,24,0	0/0:27,0:27:75.26:0,75,3362	1/1:20,4:19:51.18:4151,51,0	0/0:18,0:18:48.16:0,48,2896	0/0:15,0:15:42.12:0,42,2102	0/0:15,0:14:39.13:0,39,2096	0/0:18,0:18:51.18:0,51,3065	0/0:24,0:24:66.23:0,66,3426	0/0:22,0:21:54.17:0,54,2564	0/0:19,0:19:54.19:0,54,3156	0/0:23,0:21:57.19:0,57,3230	0/0:24,0:24:50.89:0,51,2974	0/0:24,0:23:60.19:0,60,2699	0/0:14,0:14:42.13:0,42,2205	0/0:31,0:31:81.20:0,81,4317	0/0:17,0:17:42.13:0,42,2382	0/0:21,0:21:60.19:0,60,3240	0/0:26,0:26:66.22:0,66,3712	1/1:8,2:14:30.10:2324,30,0	0/0:30,0:29:87.30:0,87,4647	0/0:29,0:27:81.20:0,81,4452	0/0:16,0:16:35.95:0,36,1894
chr10	109460774	.	ATG	A	3178.73	PASS	AB=0.583;AC=9;AF=0.161;AN=56;BaseQRankSum=4.956;DP=1212;FS=7.057;HRun=0;HaplotypeScore=291.7468;InbreedingCoeff=0.8338;MQ=51.98;MQ0=28;MQRankSum=4.230;QD=20.91;ReadPosRankSum=1.450;VQSLOD=2.4804;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:50:84.41:0,84,1368	0/0:11,0:11:30.10:0,30,505	0/0:50,1:22:49.31:0,49,707	0/0:42,0:16:39.12:0,39,631	1/1:7,15:22:49.34:641,49,0	1/1:4,23:27:25.07:592,25,0	1/1:11,11:21:33.09:413,33,0	0/0:58,0:43:79.75:0,80,1314	1/1:12,34:43:0.80:874,1,0	0/0:67,1:68:99:0,135,2746	0/0:33,0:33:90.29:0,90,1494	0/0:54,0:54:99:0,108,1800	0/0:57,0:56:99:0,142,2235	0/0:67,0:65:99:0,150,2360	0/0:75,0:75:99:0,130,2061	0/0:61,1:62:99:0,126,2690	0/0:29,0:29:50.71:0,51,938	0/0:24,0:23:51.30:0,51,688	0/0:27,0:23:51.12:0,51,783	0/0:44,0:43:80.68:0,81,1200	0/0:83,0:68:99:0,109,1664	0/0:43,0:41:86.36:0,86,1353	0/0:35,0:33:69.20:0,69,1127	0/0:29,0:27:21.40:0,21,407	0/1:10,25:35:5.13:813,0,5	0/0:54,0:51:99:0,118,1798	0/0:40,0:39:84.67:0,85,1327	0/0:19,0:19:57.11:0,57,851
chr10	109460875	.	ATG	A	39378.47	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=16.206;DP=1746;FS=6.171;HRun=0;HaplotypeScore=378.0932;InbreedingCoeff=0.9984;MQ=53.58;MQ0=14;MQRankSum=3.306;QD=26.73;ReadPosRankSum=5.046;VQSLOD=3.9254;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,53:66:99:1773,139,0	0/0:13,0:13:30.05:0,30,445	0/0:48,1:27:18.40:0,18,720	0/0:67,0:42:70.42:0,70,940	1/1:5,42:48:95.86:1209,96,0	1/1:7,39:44:90.29:1135,90,0	1/1:32,40:68:99:1777,147,0	1/1:23,59:79:99:2156,175,0	1/1:9,78:83:99:1966,156,0	0/0:60,0:60:99:0,147,2353	0/0:21,0:21:54.15:0,54,825	1/1:13,59:72:99:2076,166,0	1/1:11,65:76:99:1983,159,0	1/1:5,83:82:99:2080,165,0	1/1:12,90:100:99:2479,199,0	0/0:61,1:62:99:0,125,2497	1/1:4,29:34:90.29:1135,90,0	1/1:5,33:39:99:1319,108,0	1/1:8,30:34:69.20:852,69,0	1/1:12,56:68:99:1842,147,0	1/1:32,99:130:99:3795,294,0	1/1:4,53:57:99:1762,141,0	1/1:3,44:47:99:1400,111,0	1/1:8,66:73:99:1482,120,0	1/1:3,43:46:99:1315,99,0	1/1:12,98:107:99:3416,277,0	1/1:5,54:59:99:1637,132,0	1/1:6,23:29:63.20:789,63,0
chr10	109460978	.	CTG	C	9089.43	PASS	AB=0.889;AC=37;AF=0.661;AN=56;BaseQRankSum=4.017;DP=1036;FS=3.635;HRun=0;HaplotypeScore=275.9047;InbreedingCoeff=0.6537;MQ=50.44;MQ0=27;MQRankSum=4.037;QD=12.20;ReadPosRankSum=3.918;VQSLOD=4.1939;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,25:42:41.94:738,42,0	0/1:14,1:15:6.87:7,0,311	0/1:81,0:24:5.10:5,0,80	0/0:94,0:29:15:0,15,181	0/0:22,0:25:19.45:0,19,173	0/0:23,0:29:38.04:0,38,311	0/0:34,0:41:31.95:0,32,243	1/1:44,7:50:26.88:278,27,0	0/0:23,0:27:28.32:0,28,224	0/0:43,0:43:40.39:0,40,799	0/1:17,2:19:9.92:10,0,245	1/1:22,17:40:60.07:660,60,0	1/1:23,12:35:41.85:473,42,0	0/1:16,12:28:30.42:303,0,30	1/1:24,22:48:74.43:778,74,0	0/1:30,3:33:7.95:8,0,754	1/1:18,15:33:37.40:529,37,0	1/1:16,11:27:35.65:385,36,0	1/1:10,9:18:27.08:305,27,0	1/1:17,16:33:45.13:509,45,0	1/1:33,31:64:95.04:1058,95,0	1/1:12,16:33:38.54:401,39,0	1/1:11,13:26:35.76:367,36,0	1/1:20,15:35:45.11:499,45,0	0/0:19,0:28:40.63:0,41,315	1/1:15,25:39:84.21:931,84,0	1/1:7,17:24:45.13:509,45,0	1/1:7,8:15:30.09:339,30,0
chr10	109462531	.	TCC	T	4252.49	PASS	AB=0.952;AC=21;AF=0.375;AN=56;BaseQRankSum=-4.840;DP=441;FS=15.889;HRun=11;HaplotypeScore=68.9802;InbreedingCoeff=0.8971;MQ=81.53;MQ0=2;MQRankSum=-1.455;QD=21.05;ReadPosRankSum=3.360;VQSLOD=2.4017;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:25:60.13:638,60,0	0/0:6,0:8:17.02:0,17,179	0/1:18,1:18:16.34:16,0,358	0/0:11,0:11:14.27:0,14,101	0/0:8,0:8:15.05:0,15,228	0/0:10,0:12:18.02:0,18,241	0/0:31,0:38:90.67:0,91,1118	1/1:11,6:17:18:191,18,0	0/0:10,0:10:24.06:0,24,319	0/0:10,0:10:12.02:0,12,127	0/0:10,0:10:11.52:0,12,126	0/0:5,0:17:27.32:0,27,94	0/0:4,0:16:33.45:0,33,164	0/0:3,0:14:35.16:0,35,136	0/0:6,0:18:35.81:0,36,169	0/0:6,0:6:15.02:0,15,172	1/1:2,21:23:57.14:607,57,0	1/1:5,20:25:60.14:639,60,0	1/1:3,13:16:45.07:466,45,0	1/1:1,5:6:15.03:160,15,0	1/1:8,20:27:54.11:574,54,0	0/0:7,0:14:22.71:0,23,80	0/0:3,0:11:12.48:0,12,43	0/0:5,0:18:32.44:0,32,112	0/0:15,0:18:29.02:0,29,304	1/1:2,10:12:30.07:319,30,0	1/1:0,13:13:36.09:383,36,0	1/1:6,9:17:20.70:259,21,0
chr10	109462881	.	T	TGC	5257.87	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-11.700;DP=949;FS=4.805;HRun=0;HaplotypeScore=153.4078;InbreedingCoeff=0.9996;MQ=57.67;MQ0=4;MQRankSum=0.579;QD=33.49;ReadPosRankSum=1.913;VQSLOD=6.3885;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:67,0:67:99:0,159,2106	0/0:16,0:16:48.11:0,48,625	0/0:37,0:22:28.66:0,29,501	0/0:29,0:18:41.34:0,41,428	1/1:0,22:22:39.09:697,39,0	1/1:2,26:28:63.22:1129,63,0	1/1:2,42:44:75.26:1344,75,0	0/0:39,0:39:99:0,99,1284	1/1:1,41:43:81.28:1446,81,0	0/0:42,0:42:99:0,120,1512	0/0:17,0:17:51.15:0,51,694	0/0:40,0:40:93.22:0,93,1228	0/0:36,0:36:90.29:0,90,1231	0/0:33,0:33:66.16:0,66,882	0/0:48,0:48:99:0,117,1615	0/0:38,0:38:99:0,105,1413	0/0:29,0:29:69.19:0,69,941	0/0:29,0:29:75.23:0,75,1029	0/0:22,0:22:59.81:0,60,649	0/0:19,0:19:48.15:0,48,653	0/0:93,0:93:99:0,222,2969	0/0:24,0:24:51.17:0,51,709	0/0:12,0:14:28.87:0,29,354	0/0:46,0:46:99:0,103,1386	1/1:3,16:19:36.12:641,36,0	0/0:26,0:26:69.10:0,69,848	0/0:32,0:32:72.20:0,72,983	0/0:16,0:16:39.13:0,39,544
chr10	109462942	.	GTGTGTGTGCACACA	G	20010.90	PASS	AB=0.580;AC=33;AF=0.589;AN=56;BaseQRankSum=14.724;DP=864;FS=15.587;HRun=0;HaplotypeScore=308.5490;InbreedingCoeff=0.8939;MQ=55.35;MQ0=14;MQRankSum=-13.095;QD=41.78;ReadPosRankSum=1.457;VQSLOD=3.1318;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,20:48:20.79:743,21,0	0/0:11,0:11:21.07:0,21,1009	0/0:65,0:21:21.07:0,21,732	0/0:56,0:22:35.52:0,36,875	0/0:23,0:23:48.16:0,48,3066	0/0:26,0:26:53.55:0,54,3635	0/0:43,0:43:96.80:0,97,5236	1/1:10,5:15:15.04:355,15,0	0/0:45,0:45:78.27:0,78,5197	0/0:46,0:46:99:0,102,5936	0/0:17,0:17:36.12:0,36,2132	1/1:14,21:35:60.21:2125,60,0	1/1:11,22:33:60.21:2127,60,0	1/1:9,33:42:75.26:2797,75,0	1/1:8,28:36:63.22:2331,63,0	0/0:35,0:35:87.30:0,87,5121	1/1:11,13:24:21.07:724,21,0	1/1:13,8:21:18.06:716,18,0	1/1:11,7:18:21.07:640,21,0	1/1:0,13:13:30.10:1034,30,0	1/1:37,22:59:18.99:505,19,0	1/1:9,25:34:57.64:1663,58,0	1/1:2,10:12:14.63:473,15,0	1/1:16,16:32:9.01:279,9,0	0/0:17,0:17:33.11:0,33,2061	0/1:8,21:29:99:2110,0,297	1/1:6,14:20:33.11:1173,33,0	1/1:4,4:8:6.02:215,6,0
chr10	109466210	.	G	GAAA	4102.32	PASS	AB=0.811;AC=42;AF=0.750;AN=56;BaseQRankSum=3.328;DP=539;FS=4.078;HRun=16;HaplotypeScore=96.1481;InbreedingCoeff=0.3677;MQ=46.57;MQ0=18;MQRankSum=-3.729;QD=8.19;ReadPosRankSum=-1.523;VQSLOD=0.0978;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,20:42:16.78:478,17,0	0/0:7,0:10:14.62:0,15,151	0/1:5,0:3:0:0,0,0	0/0:6,0:3:1.57:0,2,12	1/1:21,1:23:25.38:192,25,0	0/1:13,0:15:10.55:90,0,11	1/1:11,2:23:7.79:238,8,0	1/1:31,1:33:9.65:335,10,0	1/1:14,0:15:19.14:147,19,0	0/1:23,0:25:29.91:30,0,128	0/0:8,0:9:3.81:0,4,39	1/1:7,0:12:23.64:178,24,0	1/1:5,1:13:16.19:159,16,0	1/1:12,1:19:16.96:135,17,0	1/1:15,0:19:13.18:110,13,0	0/0:12,0:13:11.45:0,11,111	1/1:17,15:37:33.01:418,33,0	1/1:7,8:16:11.99:127,12,0	1/1:9,0:8:9:84,9,0	1/1:8,1:13:14.78:127,15,0	1/1:7,2:15:8.93:75,9,0	1/1:7,0:15:14.01:75,14,0	0/1:5,0:13:12.76:56,0,13	0/1:8,9:22:6.83:65,0,7	0/1:8,0:11:8.49:108,0,8	1/1:21,12:38:41.38:498,41,0	1/1:9,6:17:19.70:218,20,0	1/1:18,0:20:19.13:158,19,0
chr10	109468056	.	TG	T	13115.62	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=11.518;DP=561;FS=5.078;HRun=1;HaplotypeScore=78.2944;InbreedingCoeff=0.9829;MQ=55.45;MQ0=32;MQRankSum=-1.838;QD=35.45;ReadPosRankSum=1.893;VQSLOD=5.1043;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:78.26:1091,78,0	0/0:11,0:11:33.11:0,33,527	0/0:7,0:6:7.69:0,8,196	0/0:13,0:12:32.73:0,33,499	0/0:17,0:17:45.15:0,45,719	0/0:16,0:16:36.12:0,36,575	0/0:27,0:26:60.20:0,60,958	1/1:1,23:23:66.22:920,66,0	0/0:31,0:30:78.27:0,78,1247	0/0:15,0:12:33.11:0,33,517	0/0:11,0:8:18.05:0,18,264	1/1:2,20:20:54.18:755,54,0	1/1:4,23:24:72.24:1004,72,0	1/1:2,19:19:48.16:671,48,0	1/1:2,22:22:66.22:923,66,0	0/0:28,0:27:72.07:0,72,1122	1/1:1,32:33:93.30:1282,93,0	1/1:5,21:25:39.25:835,39,0	1/1:3,17:17:48.16:670,48,0	1/1:2,11:11:33.11:461,33,0	1/1:4,37:36:99:1362,99,0	1/1:2,13:12:33.11:461,33,0	1/1:1,10:10:27.09:376,27,0	1/1:2,22:22:51.17:711,51,0	0/0:15,0:13:24.08:0,24,383	1/1:0,15:15:42.14:587,42,0	1/1:0,21:21:60.20:839,60,0	1/1:0,5:5:12.04:168,12,0
chr10	109468299	.	G	GA	2451.17	PASS	AB=0.600;AC=33;AF=0.589;AN=56;BaseQRankSum=16.377;DP=522;FS=79.928;HRun=0;HaplotypeScore=130.7195;InbreedingCoeff=0.8712;MQ=49.32;MQ0=10;MQRankSum=-15.662;QD=9.73;ReadPosRankSum=1.675;VQSLOD=0.7426;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,12:13:14.50:81,15,0	0/0:13,0:13:39.12:0,39,527	0/0:20,0:12:36.06:0,36,443	0/0:24,0:17:48.13:0,48,650	0/0:19,0:19:50.91:0,51,713	0/0:20,0:20:54.18:0,54,755	0/0:40,0:40:99:0,108,1509	1/1:7,8:11:27.01:296,27,0	0/0:45,0:44:99:0,123,1717	0/0:27,0:27:81.27:0,81,1132	0/0:17,0:16:48.16:0,48,671	1/1:3,10:13:28.88:157,29,0	1/1:1,18:17:40.47:244,40,0	1/1:1,11:11:22.36:109,22,0	1/1:3,20:21:40.27:212,40,0	0/0:34,0:34:96.32:0,96,1343	1/1:1,5:5:5.74:30,6,0	1/1:1,6:6:8.85:56,9,0	1/1:3,6:7:15.01:164,15,0	1/1:2,20:21:43.54:241,44,0	1/1:1,6:6:2.63:14,3,0	1/1:5,23:28:51.36:262,51,0	1/1:7,18:24:36.98:185,37,0	1/1:2,8:8:11.29:55,11,0	0/0:11,0:11:33.11:0,33,461	0/1:5,10:13:12.29:164,0,12	1/1:3,10:12:33.36:247,33,0	1/1:0,9:9:23.68:157,24,0
chr10	109470630	.	T	TTAGA	179.88	PASS	AC=4;AF=0.286;AN=14;BaseQRankSum=-0.978;DP=133;FS=6.264;HRun=0;HaplotypeScore=24.6060;MQ=15.57;MQ0=102;MQRankSum=-0.382;QD=22.49;ReadPosRankSum=-1.708;VQSLOD=1.7890;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/0:7,0:3:3.01:0,3,63	./.	./.	./.	./.	./.	./.	0/0:9,0:2:6.02:0,6,126	./.	0/0:7,0:7:9.03:0,9,188	./.	1/1:1,3:3:6.02:173,6,0	1/1:1,2:4:2.77:86,3,0	./.	0/0:7,0:7:3.01:0,3,63	./.	0/0:4,0:1:3.01:0,3,63	./.
chr10	109470888	.	TAGTACCATGATG	T	3985.98	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=9.044;DP=371;FS=15.171;HRun=0;HaplotypeScore=110.4480;InbreedingCoeff=0.9019;MQ=38.76;MQ0=37;MQRankSum=-5.417;QD=94.90;ReadPosRankSum=3.363;VQSLOD=2.6961;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:30:48.64:0,49,2770	0/0:6,0:6:18.06:0,18,1056	0/0:9,0:1:0:0,0,0	./.	1/1:2,7:9:18.06:680,18,0	1/1:0,8:8:24.08:912,24,0	1/1:1,9:10:24.08:912,24,0	0/0:19,0:16:48.15:0,48,2452	1/1:0,4:4:12.04:456,12,0	0/0:22,0:22:63.17:0,63,3565	0/0:10,0:9:9.03:0,9,554	0/0:15,0:14:23.57:0,24,1436	0/0:13,0:12:21.07:0,21,1285	0/0:13,0:13:25.02:0,25,1425	0/0:12,0:11:18.53:0,19,1086	0/0:4,0:4:12.04:0,12,681	0/0:31,0:29:48.61:0,49,2713	0/0:16,0:12:30.10:0,30,1570	0/0:11,0:11:33.04:0,33,1572	0/0:14,0:14:36.12:0,36,2183	0/0:25,0:21:45.15:0,45,2671	0/0:14,0:14:21.07:0,21,1300	0/0:7,0:7:9.03:0,9,423	0/0:12,0:12:27.09:0,27,1506	1/1:1,10:11:27.09:1026,27,0	0/0:11,0:10:27.09:0,27,1666	0/0:16,0:16:33.11:0,33,2029	0/0:12,0:8:9.03:0,9,558
chr10	109472446	.	AAGG	A	3688.04	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.903;DP=608;FS=11.884;HRun=0;HaplotypeScore=85.9280;InbreedingCoeff=0.9999;MQ=90.20;MQ0=0;MQRankSum=-4.129;QD=40.09;ReadPosRankSum=2.797;VQSLOD=4.6139;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.28:0,96,1978	0/0:15,0:15:45.13:0,45,911	0/0:27,0:27:66.16:0,66,1200	0/0:22,0:22:57.10:0,57,1076	1/1:1,16:17:42.14:665,42,0	1/1:1,17:18:48.16:770,48,0	1/1:1,25:26:60.20:962,60,0	0/0:29,0:29:66.19:0,66,1214	1/1:0,16:16:45.15:713,45,0	0/0:25,0:25:72.22:0,72,1536	0/0:13,0:13:36.12:0,36,792	0/0:31,0:31:84.27:0,84,1811	0/0:18,0:18:42.13:0,42,885	0/0:27,0:27:75.23:0,75,1554	0/0:15,0:15:42.14:0,42,888	0/0:17,0:17:48.15:0,48,1018	0/0:15,0:15:36.12:0,36,761	0/0:24,0:24:63.16:0,63,1301	0/0:25,0:25:66.20:0,66,1375	0/0:21,0:21:60.17:0,60,1235	0/0:29,0:29:81.26:0,81,1734	0/0:14,0:14:39.12:0,39,802	0/0:16,0:16:48.16:0,48,1025	0/0:26,0:26:78.15:0,78,1590	1/1:1,14:15:36.12:578,36,0	0/0:22,0:22:66.19:0,66,1326	0/0:29,0:29:87.27:0,87,1806	0/0:24,0:24:69.21:0,69,1375
chr10	109473390	.	A	AAAAAGAAAAGAGAAGAAAAG	10924.06	PASS	AB=0.822;AC=37;AF=0.661;AN=56;BaseQRankSum=-2.204;DP=463;FS=3.191;HRun=0;HaplotypeScore=167.0584;InbreedingCoeff=0.6963;MQ=48.56;MQ0=21;MQRankSum=-4.310;QD=33.72;ReadPosRankSum=-2.567;VQSLOD=3.6473;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:16:20.90:635,21,0	0/0:9,0:7:21.07:0,21,1075	1/1:20,0:2:2.02:6,2,0	0/0:35,0:9:14.72:0,15,201	0/1:11,0:25:73.67:74,0,279	0/0:8,0:15:26.99:0,27,320	0/1:15,0:16:51.92:52,0,162	1/1:16,0:11:26.26:876,26,0	0/0:10,0:19:20.99:0,21,260	0/0:17,0:16:42.10:0,42,1118	0/0:11,0:10:27.07:0,27,987	1/1:1,7:13:9.03:417,9,0	1/1:2,7:15:15.05:1103,15,0	1/1:3,6:18:15.05:1266,15,0	1/1:10,0:10:20.96:473,21,0	0/0:13,0:13:24:0,24,481	1/1:12,0:11:14.98:413,15,0	0/1:17,0:15:99:914,0,102	1/1:21,0:16:35.56:579,36,0	1/1:14,0:13:18:560,18,0	1/1:12,0:12:17.98:194,18,0	1/1:5,6:21:17.72:437,18,0	1/1:18,0:18:29.74:990,30,0	1/1:9,0:9:11.87:148,12,0	0/0:7,0:19:27.39:0,27,414	1/1:20,0:14:12.08:1126,12,0	1/1:16,0:15:17.91:352,18,0	1/1:6,0:6:9:310,9,0
chr10	109473492	.	C	CAAA	1569.61	PASS	AB=0.985;AC=37;AF=0.661;AN=56;BaseQRankSum=4.690;DP=506;FS=1.550;HRun=9;HaplotypeScore=117.0931;InbreedingCoeff=0.2339;MQ=32.30;MQ0=64;MQRankSum=-2.372;QD=3.71;ReadPosRankSum=-0.347;VQSLOD=-0.5207;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:23:12.51:148,13,0	0/0:7,0:6:12:0,12,136	0/0:23,0:3:2.54:0,3,23	0/1:29,1:7:2.04:40,0,2	0/1:17,0:15:25.26:25,0,26	0/1:16,0:17:18.16:18,0,24	0/1:20,0:21:0.48:55,0,0	1/1:16,0:12:9.10:44,9,0	1/1:12,0:11:9.89:47,10,0	0/0:17,0:15:23.13:0,23,257	0/0:20,0:19:23.59:0,24,271	1/1:16,0:12:18.95:204,19,0	1/1:6,5:11:6.23:59,6,0	0/1:14,0:13:7.45:18,0,7	1/1:14,0:12:5.79:32,6,0	0/0:16,0:16:22.87:0,23,257	1/1:28,0:21:12.44:166,12,0	0/1:23,0:17:12.38:130,0,12	1/1:15,0:12:5.82:22,6,0	1/1:13,0:10:7.02:58,7,0	1/1:15,0:11:9.33:86,9,0	1/1:11,0:9:7.05:57,7,0	1/1:11,0:10:14.19:126,14,0	1/1:13,0:12:10.21:100,10,0	0/1:21,0:21:14.84:17,0,15	0/1:19,0:19:23.91:110,0,24	1/1:17,0:15:20.49:173,20,0	0/1:21,0:18:10.01:11,0,10
chr10	109473501	.	AG	A	3973.17	PASS	AB=0.983;AC=48;AF=0.857;AN=56;BaseQRankSum=-1.362;DP=522;FS=10.973;HRun=1;HaplotypeScore=70.7363;InbreedingCoeff=0.3790;MQ=29.12;MQ0=74;MQRankSum=-1.612;QD=8.40;ReadPosRankSum=0.445;VQSLOD=-0.2288;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:20:36.09:255,36,0	0/1:9,0:8:7.79:8,0,54	0/0:31,1:3:4.82:0,5,32	0/1:44,1:10:8.87:15,0,9	1/1:14,1:13:12.85:150,13,0	1/1:14,0:12:32.76:238,33,0	1/1:21,2:18:45.78:312,46,0	1/1:22,0:16:36.91:219,37,0	1/1:10,0:8:19.77:129,20,0	0/1:24,0:22:48.11:48,0,169	0/0:16,1:16:16.26:0,16,199	1/1:13,0:10:10.51:75,11,0	1/1:10,0:10:13.10:77,13,0	1/1:13,0:11:21.96:129,22,0	1/1:14,0:13:28.96:175,29,0	0/1:20,1:21:35.73:36,0,145	1/1:30,0:19:25.53:158,26,0	1/1:29,0:20:17.38:233,17,0	1/1:11,0:8:16.72:113,17,0	1/1:14,1:11:26.63:174,27,0	1/1:14,0:11:16.11:99,16,0	1/1:11,0:9:19.03:98,19,0	1/1:12,0:11:22.22:133,22,0	1/1:12,0:10:14.24:79,14,0	1/1:17,0:16:39.43:256,39,0	1/1:20,0:19:26.94:295,27,0	1/1:20,0:18:35.74:254,36,0	1/1:20,0:16:33.13:217,33,0
chr10	109473522	.	GA	G	618.38	PASS	AB=0.584;AC=8;AF=0.143;AN=56;BaseQRankSum=-2.698;DP=483;FS=8.918;HRun=19;HaplotypeScore=77.3242;InbreedingCoeff=0.4935;MQ=45.00;MQ0=42;MQRankSum=0.952;QD=7.11;ReadPosRankSum=-0.364;VQSLOD=1.5054;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:14:9.08:0,9,121	0/0:8,0:8:18.04:0,18,221	0/0:45,0:6:0.16:0,0,61	0/0:65,0:18:17.69:0,18,274	1/1:9,1:10:10.72:118,11,0	0/1:2,8:9:1.88:53,0,2	0/1:14,24:35:15.56:121,0,16	0/0:21,0:14:8.08:0,8,37	1/1:12,2:13:17.83:206,18,0	0/0:23,0:22:50.57:0,51,605	0/0:11,0:11:14.76:0,15,143	0/0:10,0:9:11.80:0,12,167	0/0:10,0:9:11.24:0,11,75	0/0:8,0:7:5.71:0,6,31	0/0:11,0:11:11.56:0,12,45	0/0:16,0:16:28.96:0,29,430	0/0:27,0:21:20.57:0,21,199	0/0:23,0:19:14.92:0,15,136	0/0:14,0:7:2.64:0,3,13	0/0:11,0:10:8.44:0,8,57	0/0:15,0:12:19.31:0,19,161	0/0:8,0:7:8.44:0,8,78	0/0:9,0:9:14.76:0,15,142	0/0:10,0:9:3.01:0,3,40	1/1:10,5:15:5.45:259,5,0	0/0:15,0:14:16.40:0,16,138	0/0:13,0:12:14.45:0,14,101	0/0:5,0:4:2.74:0,3,7
chr10	109474560	.	TCTCTCGC	T	277.44	PASS	AB=0.964;AC=11;AF=0.196;AN=56;BaseQRankSum=4.797;DP=417;FS=14.780;HRun=0;HaplotypeScore=151.7204;InbreedingCoeff=0.2920;MQ=45.86;MQ0=14;MQRankSum=-0.022;QD=2.72;ReadPosRankSum=-0.504;VQSLOD=1.6317;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:20:18.06:0,18,526	0/0:7,0:7:12.04:0,12,399	0/1:9,0:4:25.66:26,0,152	0/0:10,0:7:17.93:0,18,342	0/0:5,3:9:0.19:0,0,1	1/1:6,4:10:9.60:195,10,0	1/1:24,2:26:11.84:114,12,0	0/0:17,0:15:42.13:0,42,981	0/1:7,2:9:52.36:52,0,63	0/0:12,0:11:30.10:0,30,735	0/0:4,0:4:6.02:0,6,184	0/0:16,0:16:13.77:0,14,345	0/1:13,0:13:3.47:3,0,419	0/0:15,0:15:14.54:0,15,650	0/0:15,0:14:0.14:0,0,321	0/0:11,0:11:27.09:0,27,810	0/0:36,0:36:81.74:0,82,1988	0/0:31,0:30:76.14:0,76,1885	0/0:21,0:14:40.94:0,41,824	0/0:3,0:3:6.01:0,6,173	0/0:12,0:9:12.04:0,12,282	0/1:12,0:12:5.31:5,0,367	0/1:9,0:9:15.74:16,0,230	0/0:32,0:32:23.22:0,23,1085	1/1:8,5:13:0.33:1,0,0	0/0:19,0:18:52.73:0,53,1242	0/0:15,0:15:33.09:0,33,711	0/0:7,0:7:18.06:0,18,421
chr10	109474564	.	TCG	T	700.11	PASS	AB=0.968;AC=22;AF=0.440;AN=50;BaseQRankSum=0.168;DP=413;FS=15.099;HRun=0;HaplotypeScore=125.8110;InbreedingCoeff=-0.2223;MQ=45.69;MQ0=15;MQRankSum=0.604;QD=2.13;ReadPosRankSum=-2.291;VQSLOD=1.3016;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:19:13.13:0,13,86	0/0:7,0:7:12.04:0,12,203	0/1:7,0:3:13.07:13,0,34	0/0:8,0:5:5.82:0,6,51	./.	1/1:10,0:10:6.31:65,6,0	0/1:27,0:26:38.71:39,0,40	1/1:16,0:14:6.83:40,7,0	0/1:9,0:9:4.85:25,0,5	0/0:13,0:12:31.80:0,32,309	0/0:4,0:4:6.01:0,6,81	0/1:16,1:17:1.91:86,0,2	0/1:12,0:12:29.33:100,0,29	0/1:13,2:15:52.47:76,0,52	0/1:14,1:14:24.29:67,0,24	0/1:11,0:11:1.31:1,0,270	0/1:29,5:34:76.46:76,0,295	0/1:34,2:35:51.37:51,0,270	0/1:19,0:12:12.38:39,0,12	./.	./.	0/1:12,1:13:53.92:60,0,54	1/1:8,1:9:8.94:65,9,0	0/1:30,0:31:16.43:16,0,133	0/1:13,0:13:0:0,0,0	0/1:19,0:18:7.33:7,0,39	0/1:15,0:15:20.70:21,0,84	0/0:6,0:5:8.63:0,9,40
chr10	109474598	.	GCACGCA	G	733.67	PASS	AB=0.927;AC=15;AF=0.278;AN=54;BaseQRankSum=1.610;DP=318;FS=6.627;HRun=0;HaplotypeScore=85.4198;InbreedingCoeff=0.4188;MQ=46.72;MQ0=26;MQRankSum=-3.162;QD=6.49;ReadPosRankSum=-0.084;VQSLOD=0.8375;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:5:12.79:99,0,13	0/0:4,0:4:12:0,12,162	0/0:8,0:2:3.01:0,3,44	0/0:15,0:4:8.93:0,9,81	0/1:6,8:12:11.63:31,0,12	1/1:1,16:18:15.05:269,15,0	1/1:7,13:18:10.39:114,10,0	1/1:3,0:2:6.02:74,6,0	1/1:4,2:4:9.03:146,9,0	0/0:12,0:11:33.11:0,33,831	0/0:6,0:6:18.06:0,18,314	0/1:12,0:12:4.54:5,0,170	0/0:9,0:9:16.66:0,17,185	0/0:8,0:8:10.66:0,11,141	0/0:8,0:8:7.66:0,8,137	0/0:6,0:6:18.05:0,18,448	0/0:30,0:27:23:0,23,260	0/0:28,0:25:35.98:0,36,395	0/1:6,0:4:2.33:65,0,2	./.	0/0:9,0:6:0:0,0,0	0/0:8,1:9:6.24:0,6,80	0/0:9,0:9:6.96:0,7,79	0/0:22,0:22:33.68:0,34,491	1/1:9,9:16:3.01:37,3,0	0/1:7,0:6:55.67:56,0,131	0/0:17,0:15:17.68:0,18,242	0/0:4,0:2:5.51:0,6,53
chr10	109474602	.	GCA	G	785.45	PASS	AB=0.880;AC=19;AF=0.365;AN=52;BaseQRankSum=2.517;DP=320;FS=0.777;HRun=0;HaplotypeScore=71.1730;InbreedingCoeff=0.4420;MQ=47.61;MQ0=23;MQRankSum=-2.391;QD=4.44;ReadPosRankSum=1.801;VQSLOD=2.3551;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,7:6:9.03:111,9,0	0/0:3,0:3:6.02:0,6,93	0/0:12,0:4:9.03:0,9,132	0/0:17,0:6:14.91:0,15,134	0/1:14,0:12:11.63:31,0,12	1/1:18,0:18:14.53:147,15,0	1/1:19,1:18:12.18:123,12,0	0/1:1,3:4:13.55:86,0,14	1/1:5,1:4:8.81:81,9,0	0/0:12,0:11:33.11:0,33,517	0/0:7,0:7:15.05:0,15,226	0/0:12,0:12:15.95:0,16,183	0/0:8,0:8:13.85:0,14,161	0/0:8,0:8:9.19:0,9,96	0/0:7,0:7:11.50:0,11,96	0/0:6,0:6:15.05:0,15,230	0/1:28,2:27:1.05:25,0,1	1/1:27,1:25:0.27:73,0,0	1/1:1,4:4:12.03:140,12,0	./.	./.	0/0:9,0:9:9.50:0,9,82	0/0:9,0:9:6.96:0,7,80	0/0:21,1:22:25.85:0,26,355	1/1:16,0:14:3.01:37,3,0	0/1:7,1:7:19.63:93,0,20	0/1:18,0:16:10.99:11,0,28	0/0:4,0:2:2.97:0,3,20
chr10	109474604	.	A	ACG	1792.02	PASS	AB=0.855;AC=23;AF=0.426;AN=54;BaseQRankSum=-0.497;DP=321;FS=1.540;HRun=0;HaplotypeScore=68.3594;InbreedingCoeff=0.5478;MQ=48.09;MQ0=23;MQRankSum=-3.431;QD=9.48;ReadPosRankSum=0.787;VQSLOD=3.3670;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,1:7:11.99:131,12,0	0/0:2,0:2:6.02:0,6,88	0/0:13,0:5:12.04:0,12,175	0/0:17,0:6:14.91:0,15,134	0/1:12,2:12:11.63:31,0,12	0/1:18,0:18:4.67:71,0,5	1/1:19,1:18:3.81:103,4,0	0/1:4,0:4:13.54:86,0,14	1/1:5,1:4:4.41:52,4,0	0/0:11,1:11:33.11:0,33,498	0/0:7,0:7:18.04:0,18,247	0/0:12,0:12:24.06:0,24,305	0/0:8,0:8:21.06:0,21,266	0/0:8,0:8:21.03:0,21,230	0/0:6,0:6:18.03:0,18,203	0/0:6,0:6:15.05:0,15,228	1/1:5,25:28:2.07:283,2,0	1/1:2,25:25:35.97:601,36,0	1/1:5,0:4:12.04:165,12,0	./.	0/1:2,4:5:0:0,0,0	0/0:9,0:9:18.03:0,18,191	0/0:9,0:9:12.03:0,12,135	0/0:22,0:22:36.08:0,36,465	1/1:16,1:15:3.01:37,3,0	1/1:2,7:8:18.41:226,18,0	1/1:3,13:14:1.08:176,1,0	0/1:3,1:2:4.11:7,0,4
chr10	109478205	.	CGAGAG	C	16330	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=14.799;DP=638;FS=1.496;HRun=0;HaplotypeScore=145.3897;InbreedingCoeff=0.9914;MQ=76.37;MQ0=0;MQRankSum=-13.563;QD=39.83;ReadPosRankSum=1.688;VQSLOD=4.5472;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:66.23:1337,66,0	0/0:9,0:9:27.09:0,27,771	0/0:15,0:14:26.86:0,27,746	0/0:26,0:26:66.20:0,66,1811	0/0:14,0:14:39.13:0,39,1139	0/0:20,0:20:54.17:0,54,1549	0/0:34,0:34:90.31:0,90,2655	1/1:4,16:20:48.11:894,48,0	0/0:37,0:36:99:0,105,3007	0/0:26,0:26:72.24:0,72,2083	0/0:11,0:11:27.07:0,27,686	1/1:2,22:24:57.20:1153,57,0	1/1:4,17:21:39.13:790,39,0	1/1:4,29:33:75.26:1500,75,0	1/1:4,32:36:87.30:1762,87,0	0/0:25,0:25:63.20:0,63,1765	1/1:1,27:28:51.17:1020,51,0	1/1:2,27:29:60.21:1208,60,0	1/1:3,14:17:42.13:795,42,0	1/1:0,4:4:12.04:240,12,0	1/1:8,48:56:46.09:914,46,0	1/1:3,19:22:54.19:1092,54,0	1/1:2,9:11:18.06:364,18,0	1/1:0,29:29:51.17:1022,51,0	0/0:11,0:11:24.07:0,24,638	1/1:3,21:24:63.19:1208,63,0	1/1:2,12:14:36.12:726,36,0	1/1:2,7:9:15.05:304,15,0
chr10	109480087	.	T	TG	553.32	PASS	AB=0.833;AC=26;AF=0.765;AN=34;BaseQRankSum=1.567;DP=39;FS=2.318;HRun=1;HaplotypeScore=37.4191;InbreedingCoeff=0.2212;MQ=87.17;MQ0=0;MQRankSum=-0.705;QD=20.49;ReadPosRankSum=0.627;VQSLOD=3.7478;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:3.01:36,3,0	./.	0/0:4,0:3:5.91:0,6,38	./.	./.	1/1:1,1:2:3.01:41,3,0	1/1:1,0:1:3.01:34,3,0	1/1:2,0:2:3.01:41,3,0	1/1:0,1:1:3.01:41,3,0	1/1:1,1:2:6.02:77,6,0	./.	1/1:1,1:2:6.02:82,6,0	./.	0/1:1,1:2:1.32:36,0,1	./.	1/1:1,2:3:6.02:82,6,0	0/1:2,0:2:0:0,0,0	./.	1/1:2,0:2:3.01:38,3,0	./.	1/1:3,0:3:2.99:24,3,0	./.	0/0:1,0:1:1.55:0,2,4	0/0:1,0:1:0.89:0,1,2	./.	1/1:2,0:2:6.02:72,6,0	1/1:0,1:1:3.01:41,3,0	./.
chr10	109480095	.	T	TG	866.52	PASS	AB=0.750;AC=34;AF=0.944;AN=36;BaseQRankSum=-1.733;DP=44;FS=11.761;HRun=2;HaplotypeScore=41.5974;InbreedingCoeff=0.0579;MQ=72.27;MQ0=0;MQRankSum=-0.231;QD=20.63;ReadPosRankSum=-1.733;VQSLOD=1.7922;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:4:3.01:36,3,0	./.	1/1:2,2:3:6.02:83,6,0	0/1:3,0:2:0:0,0,0	./.	1/1:1,3:4:10.83:104,11,0	1/1:0,2:2:3.01:32,3,0	1/1:0,2:2:6.02:78,6,0	1/1:0,1:1:3:26,3,0	1/1:0,3:3:9.03:110,9,0	./.	1/1:1,1:2:5.77:34,6,0	./.	1/1:1,2:3:0.52:58,1,0	./.	1/1:1,2:3:6.02:72,6,0	./.	1/1:0,2:2:5.98:55,6,0	1/1:0,1:1:3.01:40,3,0	0/1:0,1:1:0:0,0,0	1/1:0,1:1:3.01:35,3,0	1/1:0,2:2:3.01:35,3,0	./.	./.	./.	1/1:0,3:3:9.03:109,9,0	1/1:0,1:1:3.01:34,3,0	./.
chr10	109480104	.	GTC	G	1514.22	PASS	AB=1.000;AC=43;AF=0.935;AN=46;BaseQRankSum=2.427;DP=77;FS=7.178;HRun=0;HaplotypeScore=52.3892;InbreedingCoeff=0.0269;MQ=91.68;MQ0=0;MQRankSum=-2.926;QD=20.46;ReadPosRankSum=2.538;VQSLOD=3.3102;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:6:14.63:140,15,0	1/1:1,0:1:3:26,3,0	1/1:5,0:6:7.36:41,7,0	0/1:4,0:5:5.22:22,0,5	0/0:1,1:2:0.47:0,0,1	1/1:0,4:4:8.47:77,8,0	1/1:0,4:4:12.03:129,12,0	1/1:1,4:5:15.03:162,15,0	1/1:0,3:3:8.94:83,9,0	1/1:0,4:4:12.03:130,12,0	./.	1/1:0,3:3:6.26:42,6,0	1/1:0,1:1:2.98:22,3,0	1/1:0,4:4:12.02:120,12,0	./.	1/1:1,2:3:6.01:58,6,0	1/1:0,1:1:3.01:33,3,0	1/1:0,3:3:9.03:103,9,0	1/1:1,2:3:8.96:88,9,0	1/1:0,1:1:3.01:32,3,0	1/1:0,2:2:2.71:28,3,0	1/1:0,3:3:2.66:26,3,0	1/1:0,2:2:2.20:11,2,0	./.	./.	1/1:0,4:4:12.03:126,12,0	1/1:0,4:4:8.68:95,9,0	./.
chr10	109480111	.	T	TG	2465.56	PASS	AB=1.000;AC=48;AF=0.960;AN=50;BaseQRankSum=-0.039;DP=124;FS=8.368;HRun=0;HaplotypeScore=59.9874;InbreedingCoeff=0.0446;MQ=98.74;MQ0=0;MQRankSum=-2.320;QD=20.05;ReadPosRankSum=-0.039;VQSLOD=5.0638;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:17.23:137,17,0	1/1:1,0:1:3:27,3,0	1/1:3,0:10:18.61:136,19,0	0/1:4,0:7:3.70:42,0,4	1/1:0,3:3:3.01:35,3,0	1/1:2,3:5:11.87:90,12,0	1/1:0,6:6:14.96:132,15,0	1/1:1,11:12:30.08:354,30,0	1/1:0,4:4:11.94:118,12,0	1/1:0,6:6:18.04:195,18,0	1/1:0,2:2:3.01:33,3,0	1/1:1,5:6:14.67:133,15,0	1/1:0,1:1:3.01:38,3,0	1/1:1,4:5:14.99:133,15,0	./.	1/1:0,6:6:15.03:161,15,0	1/1:0,2:2:6.01:70,6,0	1/1:1,3:4:9.02:91,9,0	1/1:0,5:5:14.50:140,15,0	1/1:0,1:1:3:29,3,0	1/1:0,4:4:5.64:67,6,0	1/1:0,3:3:8.93:74,9,0	1/1:0,4:4:6.90:71,7,0	./.	./.	1/1:0,4:4:12.02:118,12,0	1/1:0,4:4:12:118,12,0	0/1:5,0:5:0:1,0,0
chr10	109480675	.	CCCT	C	7522.30	PASS	AB=0.701;AC=21;AF=0.404;AN=52;BaseQRankSum=13.610;DP=602;FS=352.947;HRun=0;HaplotypeScore=176.5486;InbreedingCoeff=-0.6884;MQ=31.31;MQ0=115;MQRankSum=-7.976;QD=14.95;ReadPosRankSum=2.496;VQSLOD=-0.4200;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,6:17:99:119,0,607	0/0:11,0:11:24.01:0,24,480	./.	./.	0/1:13,11:22:99:242,0,469	0/1:5,7:11:80.32:277,0,80	0/1:14,8:14:99:328,0,335	0/1:13,7:18:99:299,0,354	0/1:6,11:13:99:340,0,132	0/0:25,0:20:60.21:0,60,1402	0/0:13,0:10:24.08:0,24,504	0/1:8,15:16:99:592,0,99	0/1:7,16:20:99:592,0,100	0/1:6,14:17:99:436,0,195	0/1:8,14:19:23.75:492,0,24	0/0:27,0:21:26.66:0,27,637	0/1:17,6:12:99:240,0,188	0/1:14,4:12:54.75:55,0,216	0/1:17,9:19:99:319,0,382	0/1:12,9:19:99:215,0,388	0/0:19,3:4:6.02:0,6,110	0/1:10,6:13:99:201,0,239	0/1:8,9:14:99:231,0,386	0/1:17,4:9:51.70:52,0,282	0/1:18,21:33:99:765,0,628	0/1:19,23:38:99:903,0,861	0/1:18,15:28:99:511,0,769	0/1:28,7:28:99:315,0,675
chr10	109480713	.	T	TAC	2583.52	PASS	AB=0.867;AC=19;AF=0.339;AN=56;BaseQRankSum=11.667;DP=348;FS=210.699;HRun=0;HaplotypeScore=116.9418;InbreedingCoeff=-0.3848;MQ=54.73;MQ0=15;MQRankSum=-8.257;QD=10.63;ReadPosRankSum=7.642;VQSLOD=0.2659;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,1:13:22.36:22,0,357	0/0:6,0:6:18.06:0,18,275	0/0:10,0:6:3.86:0,4,57	0/0:9,0:6:12:0,12,139	0/1:14,1:15:99:115,0,291	0/1:8,1:9:76.84:149,0,77	0/1:11,1:10:33.92:34,0,212	0/0:18,0:18:45.11:0,45,648	0/1:7,1:8:37.16:37,0,118	0/0:18,0:18:45.14:0,45,663	0/0:7,0:7:18.06:0,18,276	0/1:7,1:8:88.79:253,0,89	0/1:7,3:8:70.76:224,0,71	0/0:6,0:6:14.96:0,15,178	1/1:2,3:5:12.04:214,12,0	0/0:9,0:9:21.07:0,21,321	0/1:11,2:11:93.65:141,0,94	0/1:12,1:13:26.26:26,0,314	0/1:13,1:7:86.69:87,0,209	0/1:7,3:10:99:145,0,120	0/0:6,0:5:12.04:0,12,184	0/1:6,1:7:36.96:37,0,167	0/1:4,2:6:85.89:86,0,163	0/0:10,0:8:12.04:0,12,183	0/1:20,8:27:99:477,0,458	0/1:20,2:21:99:157,0,673	0/1:17,4:19:99:291,0,365	0/1:24,5:27:99:253,0,429
chr10	109480719	.	T	TA	1512.38	PASS	AB=0.936;AC=19;AF=0.339;AN=56;BaseQRankSum=11.799;DP=381;FS=223.129;HRun=2;HaplotypeScore=130.6344;InbreedingCoeff=-0.3641;MQ=55.58;MQ0=4;MQRankSum=-8.636;QD=5.69;ReadPosRankSum=6.677;VQSLOD=-0.4865;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:19:6.49:6,0,194	0/0:6,0:6:18.01:0,18,192	0/0:17,0:6:8.83:0,9,87	0/0:13,0:8:12.90:0,13,97	0/1:15,1:16:72.11:72,0,225	0/1:7,2:9:59.33:87,0,59	0/1:11,0:10:14.80:15,0,168	0/0:17,0:17:42.01:0,42,450	0/1:8,0:8:19.38:19,0,130	0/0:19,0:19:48.10:0,48,542	0/0:11,0:11:27.06:0,27,318	0/1:7,4:11:80.08:157,0,80	0/1:9,2:10:49.71:146,0,50	0/0:7,0:7:14.38:0,14,110	1/1:6,1:7:12.51:136,13,0	0/0:8,0:8:18.03:0,18,197	0/1:13,1:14:43.40:81,0,43	0/1:15,0:15:10.07:10,0,203	0/1:11,1:7:59.07:59,0,106	0/1:10,0:10:63.71:85,0,64	0/0:4,0:4:11.96:0,12,121	0/1:7,0:7:21.82:22,0,57	0/1:8,0:8:51.62:52,0,65	0/0:13,0:12:8.85:0,9,121	0/1:26,2:28:99:287,0,282	0/1:24,2:26:99:104,0,470	0/1:21,3:22:99:183,0,178	0/1:28,1:27:99:153,0,309
chr10	109480723	.	T	TAAA	5543.57	PASS	AB=0.946;AC=39;AF=0.696;AN=56;BaseQRankSum=4.976;DP=464;FS=21.559;HRun=15;HaplotypeScore=160.7437;InbreedingCoeff=0.3639;MQ=58.55;MQ0=6;MQRankSum=-7.388;QD=14.03;ReadPosRankSum=-1.536;VQSLOD=1.1616;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,1:21:41.40:437,41,0	0/0:4,0:4:2.83:0,3,29	0/0:23,0:11:8.18:0,8,82	0/1:15,0:10:14.85:15,0,81	0/1:19,0:19:45.32:45,0,109	0/1:10,0:10:17.85:18,0,48	0/1:12,0:13:8.01:8,0,114	1/1:22,1:24:29.92:314,30,0	0/1:6,0:10:9.09:9,0,78	0/0:15,0:19:20.28:0,20,214	0/0:11,0:13:12.46:0,12,115	1/1:16,0:17:30.55:247,31,0	1/1:12,1:12:29.98:325,30,0	1/1:11,0:12:26.09:292,26,0	1/1:10,0:10:21.90:226,22,0	0/0:9,0:10:13.02:0,13,120	1/1:18,1:19:21.45:236,21,0	1/1:5,12:20:25.27:352,25,0	1/1:11,0:9:14.78:134,15,0	1/1:12,1:13:39.02:423,39,0	0/1:4,0:5:17.42:94,0,17	1/1:5,1:6:12.03:147,12,0	1/1:6,0:6:8.99:81,9,0	1/1:16,0:16:17.88:185,18,0	0/1:29,0:31:99:186,0,168	1/1:31,3:35:60.90:689,61,0	1/1:27,2:29:57.88:548,58,0	1/1:26,5:30:47.73:530,48,0
chr10	109487888	.	CCTCTCTCTCT	C	325.32	PASS	AB=0.889;AC=7;AF=0.140;AN=50;BaseQRankSum=3.822;DP=535;FS=0.000;HRun=0;HaplotypeScore=168.3866;InbreedingCoeff=0.6516;MQ=61.56;MQ0=13;MQRankSum=-2.956;QD=5.00;ReadPosRankSum=-0.736;VQSLOD=2.6079;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:9.03:0,9,245	0/0:11,0:11:10.58:0,11,299	./.	./.	./.	1/1:15,4:20:8.95:176,9,0	1/1:17,2:19:2.90:16,3,0	0/0:24,0:23:4.26:0,4,82	1/1:5,4:10:9.03:247,9,0	0/0:28,0:28:39.13:0,39,1344	0/0:12,0:12:9.50:0,10,242	0/0:20,0:18:15.05:0,15,467	0/0:18,0:17:11.97:0,12,456	0/0:14,0:14:22:0,22,578	0/0:27,0:27:14.91:0,15,478	0/0:22,0:22:36.12:0,36,1400	0/0:18,0:17:24.01:0,24,631	0/0:10,0:10:9.03:0,9,258	0/0:20,0:19:15.05:0,15,472	0/0:16,0:15:6.49:0,6,120	0/0:18,0:17:9.90:0,10,153	0/0:22,0:22:14.90:0,15,368	0/0:22,0:22:15.05:0,15,574	0/0:26,0:25:18.93:0,19,530	0/1:14,2:16:0:0,0,0	0/0:26,0:24:33.07:0,33,1015	0/0:19,0:19:18.04:0,18,496	0/0:11,0:9:6.02:0,6,170
chr10	109487931	.	C	CTGTGTGTG	3009.71	PASS	AB=0.946;AC=22;AF=0.393;AN=56;BaseQRankSum=6.240;DP=464;FS=48.360;HRun=0;HaplotypeScore=128.7252;InbreedingCoeff=-0.0964;MQ=44.90;MQ0=13;MQRankSum=-1.745;QD=10.71;ReadPosRankSum=2.124;VQSLOD=0.9498;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:5.86:0,6,104	0/0:7,0:7:13.76:0,14,315	0/0:13,0:3:8.36:0,8,118	0/0:21,0:14:29.88:0,30,606	1/1:12,0:11:6.02:108,6,0	0/1:16,0:16:19.93:131,0,20	1/1:17,0:17:3.01:34,3,0	0/1:19,0:18:99:360,0,139	0/1:19,0:18:8.77:243,0,9	0/0:17,0:17:44.66:0,45,922	0/0:9,0:9:4.34:0,4,421	0/1:11,0:20:8.13:92,0,8	0/1:23,0:21:99:210,0,117	0/1:13,0:13:60.79:61,0,166	0/0:21,0:21:8.59:0,9,253	0/0:17,0:17:1.82:0,2,977	0/1:20,0:18:40.82:217,0,41	0/1:10,0:9:28.57:247,0,29	0/1:15,0:15:99:304,0,100	1/1:10,0:10:0.47:1,0,0	0/0:14,0:12:1.20:0,1,3	0/1:18,0:18:19.59:20,0,97	0/0:13,0:13:12.93:0,13,247	0/0:26,0:25:8.28:0,8,164	1/1:8,0:8:3.01:58,3,0	0/1:24,0:22:99:675,0,206	0/1:11,9:20:98.06:98,0,212	1/1:14,1:12:7.94:309,8,0
chr10	109487933	.	C	CTGTGTGTGTG	5191.54	PASS	AB=0.961;AC=31;AF=0.554;AN=56;BaseQRankSum=2.503;DP=456;FS=23.637;HRun=0;HaplotypeScore=132.3309;InbreedingCoeff=0.2108;MQ=45.27;MQ0=10;MQRankSum=0.298;QD=15.41;ReadPosRankSum=1.188;VQSLOD=2.2638;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:22:6.19:41,6,0	0/0:7,0:7:15.91:0,16,285	0/0:13,0:3:9.03:0,9,182	0/0:21,0:14:31.97:0,32,710	1/1:11,0:11:6.02:151,6,0	0/1:17,0:17:16.83:246,0,17	1/1:17,0:17:3.01:50,3,0	0/1:19,0:18:9.29:550,0,9	0/1:19,0:18:14.14:362,0,14	0/0:17,0:17:30.54:0,31,748	0/1:9,0:9:6.15:6,0,431	0/1:21,0:20:1.29:167,0,1	1/1:23,0:22:0.20:299,0,0	0/1:13,0:13:71.18:110,0,71	0/0:21,0:21:8.76:0,9,134	0/0:15,0:15:16.12:0,16,795	1/1:17,0:15:23.89:365,24,0	1/1:2,4:9:12.01:338,12,0	1/1:9,4:15:4.29:594,4,0	0/1:11,0:11:0:0,0,0	0/1:14,0:12:0.27:0,0,0	1/1:17,0:17:5.47:66,5,0	0/1:13,0:13:8.85:9,0,68	0/0:25,0:24:7.83:0,8,69	1/1:9,0:9:6.01:106,6,0	0/1:6,15:22:77.08:1198,0,77	0/1:20,0:19:3.78:197,0,4	1/1:6,7:12:8.80:338,9,0
chr10	109487935	.	C	CTGTGTGTG	8382.84	PASS	AB=0.780;AC=40;AF=0.714;AN=56;BaseQRankSum=1.775;DP=500;FS=0.000;HRun=0;HaplotypeScore=136.7686;InbreedingCoeff=0.6387;MQ=44.77;MQ0=9;MQRankSum=-3.786;QD=20.90;ReadPosRankSum=1.869;VQSLOD=4.1197;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:26:1.82:6,2,0	0/0:7,0:7:9.03:0,9,206	0/0:15,0:4:9.03:0,9,183	0/0:23,0:16:33.11:0,33,702	1/1:14,0:14:6.02:190,6,0	1/1:18,0:18:26.17:507,26,0	1/1:6,0:21:6.02:139,6,0	1/1:21,0:20:37.88:845,38,0	1/1:20,0:19:31.09:568,31,0	0/0:18,0:18:26.61:0,27,539	0/0:7,0:7:12.04:0,12,314	1/1:20,1:20:18.04:434,18,0	1/1:24,0:22:39.47:956,39,0	1/1:15,0:15:3.70:179,4,0	0/1:5,16:23:0:0,0,0	0/0:15,0:15:21.05:0,21,495	1/1:20,0:19:30.04:644,30,0	1/1:7,0:6:9.03:294,9,0	1/1:19,0:19:33.11:919,33,0	1/1:14,0:14:3.47:26,3,0	1/1:14,0:12:3.30:38,3,0	1/1:18,0:18:15.51:241,16,0	0/0:6,7:14:0.44:0,0,1	1/1:6,18:27:1.25:3,1,0	1/1:10,0:10:5.86:151,6,0	0/1:28,0:27:13.05:1408,0,13	1/1:25,0:24:29.74:522,30,0	1/1:13,0:11:9.03:313,9,0
chr10	109490644	.	ACCTAATGCTGTCTGCAGAGC	A	128.89	PASS	AB=0.752;AC=2;AF=0.036;AN=56;BaseQRankSum=4.683;DP=284;FS=6.882;HRun=0;HaplotypeScore=142.0344;InbreedingCoeff=-0.0464;MQ=101.49;MQ0=1;MQRankSum=2.569;QD=5.86;ReadPosRankSum=-4.183;VQSLOD=-0.0261;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.18:0,51,3824	0/0:4,0:4:12.01:0,12,759	0/0:20,0:18:50.91:0,51,2510	0/0:27,0:20:33.76:0,34,2475	0/0:11,0:11:30.10:0,30,2627	0/0:5,0:5:15.05:0,15,780	0/0:10,0:10:30.10:0,30,1257	0/0:18,0:18:54.19:0,54,3390	0/0:6,0:6:18.06:0,18,1143	0/0:10,0:10:30.10:0,30,2260	0/0:2,0:2:6.02:0,6,522	0/0:9,0:9:27.09:0,27,2385	0/0:8,0:8:24.08:0,24,1954	0/0:10,0:10:27.09:0,27,2185	0/0:14,0:14:42.13:0,42,2806	0/0:6,0:6:18.06:0,18,1298	0/0:7,0:7:18.01:0,18,1403	0/0:5,0:5:12.04:0,12,1069	0/1:10,3:13:99:110,0,1802	0/1:5,4:9:99:107,0,1253	0/0:7,0:7:21.07:0,21,1595	0/0:11,0:11:33.10:0,33,2155	0/0:5,0:5:15.05:0,15,1327	0/0:6,0:6:15.03:0,15,1062	0/0:7,0:7:21.07:0,21,1479	0/0:14,0:14:39.10:0,39,3078	0/0:13,0:13:39.13:0,39,2527	0/0:10,0:10:30.10:0,30,2558
chr10	109491689	.	CTTT	C	10064.96	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=6.006;DP=466;FS=0.000;HRun=12;HaplotypeScore=71.9535;InbreedingCoeff=0.9239;MQ=63.28;MQ0=8;MQRankSum=-2.452;QD=26.63;ReadPosRankSum=3.645;VQSLOD=3.9460;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,30:42:78.15:985,78,0	0/0:8,0:8:18.53:0,19,356	0/0:12,0:5:0:0,0,0	0/0:12,0:11:8.97:0,9,137	1/1:5,19:25:46.69:596,47,0	1/1:2,22:24:54.17:682,54,0	1/1:2,9:12:22.66:298,23,0	1/1:3,18:19:54.14:655,54,0	1/1:3,12:14:15.15:396,15,0	0/0:24,0:24:57.18:0,57,1088	0/0:18,0:17:48.16:0,48,933	1/1:1,18:19:48.15:607,48,0	1/1:2,10:11:27.08:341,27,0	1/1:1,13:14:39.12:491,39,0	1/1:2,12:12:33.09:417,33,0	0/0:14,0:14:36.12:0,36,696	1/1:5,19:22:47.53:605,48,0	1/1:6,11:15:33.08:417,33,0	1/1:3,9:12:27.04:341,27,0	1/1:1,15:16:42.13:528,42,0	1/1:1,4:5:8.98:96,9,0	1/1:6,9:14:21.03:265,21,0	1/1:2,6:7:18.05:227,18,0	1/1:2,8:10:18.05:227,18,0	1/1:4,19:22:42.09:531,42,0	1/1:3,24:25:66.14:791,66,0	1/1:1,12:12:27.08:341,27,0	1/1:1,8:9:18.05:227,18,0
chr10	109491936	.	C	CCCCT	1911.51	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.502;DP=508;FS=23.041;HRun=0;HaplotypeScore=88.0978;InbreedingCoeff=0.9259;MQ=78.58;MQ0=4;MQRankSum=-5.571;QD=34.13;ReadPosRankSum=-0.013;VQSLOD=1.8343;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:71.30:0,71,1244	0/0:3,0:3:9.03:0,9,146	0/0:54,0:32:67.85:0,68,900	0/0:39,0:21:43.94:0,44,567	1/1:2,11:15:30.10:782,30,0	1/1:0,9:11:9.03:256,9,0	1/1:3,8:12:15.05:398,15,0	0/0:25,0:25:12.09:0,12,875	1/1:1,6:7:18.06:478,18,0	0/0:16,0:15:48.14:0,48,802	0/0:18,0:19:53.89:0,54,925	0/0:15,0:14:11.08:0,11,549	0/0:13,0:12:36.10:0,36,650	0/0:13,0:12:29.96:0,30,489	0/0:19,0:19:56.58:0,57,913	0/0:25,0:26:75.26:0,75,1410	0/0:32,0:32:93.19:0,93,1630	0/0:18,0:18:54.11:0,54,934	0/0:17,0:18:53.87:0,54,849	0/0:20,0:22:65.96:0,66,1165	0/0:15,0:15:45.15:0,45,784	0/0:11,0:11:32.96:0,33,545	0/0:9,0:10:27.04:0,27,436	0/0:14,0:14:41.86:0,42,736	1/1:2,6:9:6.02:161,6,0	0/0:16,0:15:45.09:0,45,744	0/0:15,0:13:39.12:0,39,722	0/0:11,0:12:36.08:0,36,631
chr10	109493009	.	C	CCCA	13248.76	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=2.446;DP=630;FS=4.358;HRun=0;HaplotypeScore=141.4184;InbreedingCoeff=0.9918;MQ=76.73;MQ0=0;MQRankSum=-3.412;QD=24.35;ReadPosRankSum=6.717;VQSLOD=4.3902;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:27:56.72:503,57,0	0/0:5,0:5:12:0,12,142	0/0:14,0:14:33.68:0,34,378	0/0:16,0:16:27.92:0,28,276	1/1:3,13:18:35.79:688,36,0	1/1:2,14:16:36.12:755,36,0	1/1:2,30:33:78.26:1630,78,0	1/1:3,0:20:50.63:403,51,0	1/1:1,25:28:69.24:1397,69,0	0/0:25,0:24:58.16:0,58,684	0/0:9,0:9:20.76:0,21,240	1/1:3,0:32:74.05:591,74,0	1/1:3,0:24:53.86:436,54,0	1/1:1,0:29:65.81:528,66,0	1/1:3,0:23:48.15:379,48,0	0/0:17,0:17:38.71:0,39,504	1/1:1,1:21:53.89:477,54,0	1/1:2,0:20:41.90:342,42,0	1/1:2,0:26:54.73:490,55,0	1/1:1,0:18:38.92:326,39,0	1/1:2,0:59:99:1040,129,0	1/1:1,0:27:68.74:548,69,0	1/1:2,0:13:29.80:233,30,0	1/1:1,0:32:80.82:662,81,0	1/1:4,11:16:29.68:605,30,0	1/1:2,0:27:68.83:558,69,0	1/1:2,0:25:57.14:463,57,0	1/1:0,0:10:23.94:194,24,0
chr10	109494138	.	TCA	T	2532.18	PASS	AB=1.000;AC=39;AF=0.750;AN=52;BaseQRankSum=-0.002;DP=212;FS=13.034;HRun=0;HaplotypeScore=38.0516;InbreedingCoeff=0.6340;MQ=72.61;MQ0=0;MQRankSum=-2.078;QD=15.44;ReadPosRankSum=1.002;VQSLOD=1.9997;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:6:3.84:40,0,4	0/0:2,0:2:6.01:0,6,70	0/0:5,0:5:5.60:0,6,96	0/0:12,0:11:22.48:0,22,380	1/1:2,0:2:3:26,3,0	1/1:7,0:6:3.47:29,3,0	1/1:18,0:18:37.90:293,38,0	1/1:7,0:7:16.16:146,16,0	1/1:5,0:5:4.23:22,4,0	0/0:10,0:10:23.91:0,24,301	0/0:6,0:6:8.86:0,9,65	1/1:2,13:15:17.89:270,18,0	1/1:3,8:11:30.05:409,30,0	1/1:9,4:13:36.82:413,37,0	1/1:1,11:12:14.20:191,14,0	0/0:9,0:9:27.09:0,27,425	1/1:12,0:12:20.77:122,21,0	1/1:7,0:7:7.36:26,7,0	1/1:3,0:3:5.47:30,5,0	1/1:1,0:1:2.37:8,2,0	1/1:12,0:12:10.35:49,10,0	1/1:0,8:8:15.05:228,15,0	./.	1/1:1,11:12:18.06:271,18,0	1/1:1,0:1:2.92:17,3,0	1/1:2,0:2:2.94:18,3,0	1/1:10,0:10:7.39:92,7,0	./.
chr10	109494139	.	CA	C	2461.46	PASS	AC=40;AF=0.769;AN=52;BaseQRankSum=1.942;DP=207;FS=11.571;HRun=1;HaplotypeScore=35.3746;InbreedingCoeff=0.6576;MQ=76.86;MQ0=0;MQRankSum=-3.438;QD=15.48;ReadPosRankSum=1.026;VQSLOD=1.9240;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,1:6:6.86:76,7,0	0/0:2,0:2:6:0,6,51	0/0:6,0:6:2.18:0,2,77	0/0:13,0:12:4.71:0,5,280	1/1:1,0:1:3:26,3,0	1/1:6,0:5:3.47:28,3,0	1/1:17,1:18:43.03:322,43,0	1/1:7,0:7:16.28:149,16,0	1/1:5,0:5:7.58:42,8,0	0/0:9,0:9:17.37:0,17,228	0/0:5,0:5:8.87:0,9,65	1/1:13,2:15:17.55:114,18,0	1/1:11,0:11:29.66:201,30,0	1/1:12,1:13:36.94:272,37,0	1/1:11,1:12:14.54:120,15,0	0/0:9,0:9:27.03:0,27,321	1/1:7,5:12:34.24:357,34,0	1/1:0,6:6:9.03:125,9,0	1/1:0,2:2:5.99:63,6,0	1/1:0,1:1:3.01:42,3,0	1/1:0,11:11:12.04:165,12,0	1/1:8,0:8:14.82:98,15,0	./.	1/1:11,1:12:17.80:124,18,0	1/1:1,0:1:2.92:17,3,0	1/1:2,1:3:2.67:14,3,0	1/1:6,3:9:26.22:268,26,0	./.
chr10	109495019	.	AG	A	10086.71	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-4.010;DP=676;FS=1.853;HRun=6;HaplotypeScore=180.2462;InbreedingCoeff=0.9816;MQ=54.11;MQ0=6;MQRankSum=-0.415;QD=25.41;ReadPosRankSum=4.021;VQSLOD=2.6412;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,33:38:79.74:816,80,0	0/0:11,0:11:18.05:0,18,222	0/0:19,1:10:10.10:0,10,225	0/0:32,5:24:33.24:0,33,329	0/0:5,0:27:60.22:0,60,307	0/0:2,0:23:56.73:0,57,292	0/0:5,0:27:60.34:0,60,314	1/1:1,16:11:29.81:302,30,0	0/0:0,0:22:60.47:0,60,314	0/0:32,1:32:48.99:0,49,962	0/0:21,0:21:45.15:0,45,591	1/1:2,28:30:66.16:709,66,0	1/1:0,19:19:51.12:548,51,0	1/1:2,32:34:93.21:988,93,0	1/1:4,35:38:96.24:1031,96,0	0/0:36,0:36:96.18:0,96,1190	1/1:2,30:32:60.14:639,60,0	1/1:1,14:14:39.10:417,39,0	1/1:5,4:8:9.01:97,9,0	1/1:1,14:14:39.10:419,39,0	1/1:1,21:22:63.05:660,63,0	1/1:1,27:28:78.20:838,78,0	1/1:0,13:13:36.09:387,36,0	1/1:4,29:34:59.97:729,60,0	0/0:2,1:20:19.04:0,19,214	1/1:4,26:30:41.73:799,42,0	1/1:0,16:16:48.12:516,48,0	1/1:0,6:6:18.05:193,18,0
chr10	109495191	.	AGAG	A	9995.19	PASS	AB=0.951;AC=41;AF=0.732;AN=56;BaseQRankSum=2.803;DP=719;FS=9.706;HRun=0;HaplotypeScore=242.2626;InbreedingCoeff=0.0122;MQ=48.54;MQ0=30;MQRankSum=-4.259;QD=15.33;ReadPosRankSum=-2.048;VQSLOD=2.9668;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,18:32:56.51:636,57,0	0/1:11,0:11:17.92:18,0,350	0/1:36,0:15:67.32:67,0,204	0/1:25,0:15:17.93:18,0,269	0/1:16,0:14:40.70:82,0,41	0/1:22,1:22:75.20:75,0,315	0/1:19,1:20:29.84:30,0,111	1/1:10,7:15:21.05:268,21,0	0/0:25,5:25:32.36:0,32,324	0/1:28,0:28:45.42:45,0,870	0/1:26,0:26:99:131,0,551	1/1:10,23:30:57.12:799,57,0	1/1:16,18:33:68.86:793,69,0	1/1:10,25:33:74.80:985,75,0	1/1:14,17:30:44.92:587,45,0	0/0:36,1:37:10.09:0,10,1566	1/1:9,10:19:39.87:478,40,0	1/1:11,11:22:25.98:602,26,0	0/1:13,2:12:0.54:98,0,1	1/1:7,4:11:27.05:336,27,0	1/1:15,29:42:62.20:790,62,0	1/1:15,6:20:44.72:520,45,0	1/1:9,9:18:36.08:453,36,0	1/1:20,15:34:55.13:617,55,0	0/1:27,1:27:99:148,0,238	0/1:16,12:26:28.81:563,0,29	1/1:12,17:28:48.11:653,48,0	1/1:4,3:7:17.96:202,18,0
chr10	109495194	.	G	GGAA	6617.29	PASS	AB=0.996;AC=32;AF=0.571;AN=56;BaseQRankSum=-5.897;DP=739;FS=0.000;HRun=0;HaplotypeScore=252.8244;InbreedingCoeff=-0.5707;MQ=46.67;MQ0=33;MQRankSum=-2.854;QD=9.45;ReadPosRankSum=-7.300;VQSLOD=2.5960;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:32:99:210,0,161	0/1:13,0:13:8.20:8,0,308	0/1:40,0:14:64.32:64,0,228	0/1:29,0:15:5.78:6,0,275	1/1:10,7:15:26.88:424,27,0	1/1:4,18:22:57.16:1168,57,0	1/1:6,13:18:23.99:410,24,0	0/1:17,0:14:45.02:156,0,45	1/1:8,22:25:26.02:884,26,0	0/1:28,0:28:22.04:22,0,769	0/1:28,0:28:94.06:94,0,506	0/1:33,1:31:69.71:70,0,266	0/1:33,0:32:99:117,0,249	0/1:36,0:34:99:177,0,313	0/1:31,0:30:78.32:78,0,258	0/0:39,0:39:48.80:0,49,1421	0/1:21,0:21:99:100,0,148	0/1:26,0:25:99:230,0,141	0/1:17,0:13:35.60:36,0,45	0/1:11,0:11:12.28:195,0,12	0/1:44,0:42:99:259,0,177	0/1:22,0:21:69.39:327,0,69	0/1:19,0:19:88.99:89,0,182	0/1:33,1:34:99:135,0,173	1/1:16,13:28:55.32:1019,55,0	0/1:27,0:25:99:205,0,238	0/1:28,0:27:40.37:40,0,312	0/1:7,0:7:42.26:94,0,42
chr10	109495209	.	GGAA	G	7981.93	PASS	AB=0.945;AC=31;AF=0.554;AN=56;BaseQRankSum=10.997;DP=793;FS=6.748;HRun=0;HaplotypeScore=247.7621;InbreedingCoeff=-0.5246;MQ=49.09;MQ0=32;MQRankSum=-4.486;QD=11.02;ReadPosRankSum=6.380;VQSLOD=3.4868;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,3:29:80.68:450,0,81	0/1:11,1:12:69.82:70,0,445	0/1:44,5:20:99:140,0,436	0/1:32,1:20:37.82:38,0,472	0/1:22,0:20:99:138,0,191	0/1:27,0:26:99:122,0,473	0/1:18,1:18:59.35:59,0,169	0/1:21,0:18:55.13:55,0,210	0/0:27,0:22:10.21:0,10,490	0/1:30,0:31:99:241,0,1154	0/1:29,3:32:99:283,0,759	1/1:37,1:35:24.39:506,24,0	1/1:26,7:32:40.30:728,40,0	1/1:31,3:32:8.50:553,8,0	0/1:25,1:25:13.70:354,0,14	0/0:42,0:42:15.72:0,16,2069	0/1:19,3:22:61.31:316,0,61	0/1:27,2:28:83.02:412,0,83	0/1:23,0:22:99:258,0,116	0/1:13,0:13:37.21:236,0,37	0/1:45,3:46:99:441,0,121	0/1:18,6:23:7.84:462,0,8	0/1:18,2:20:38.73:316,0,39	0/1:36,5:40:99:491,0,134	0/1:34,1:34:99:283,0,517	0/1:29,1:28:99:398,0,112	1/1:21,2:22:42.49:437,42,0	1/1:3,3:6:17.90:195,18,0
chr10	109495212	.	A	AAAG	8367.34	PASS	AB=0.882;AC=27;AF=0.482;AN=56;BaseQRankSum=-0.792;DP=821;FS=66.576;HRun=0;HaplotypeScore=253.2419;InbreedingCoeff=-0.9301;MQ=49.11;MQ0=31;MQRankSum=-2.849;QD=10.50;ReadPosRankSum=-4.148;VQSLOD=1.9448;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,3:30:99:309,0,747	0/1:11,1:12:99:164,0,316	0/1:48,2:21:99:166,0,393	0/1:32,0:20:64.52:65,0,420	0/1:12,7:17:99:266,0,324	0/1:25,3:27:99:339,0,266	0/1:20,1:20:99:240,0,108	0/0:24,0:20:51.11:0,51,784	0/1:26,1:22:42.09:42,0,185	0/1:23,9:33:99:571,0,794	0/1:19,15:34:99:512,0,648	0/1:37,1:35:99:488,0,891	0/1:30,3:32:99:604,0,580	0/1:33,1:32:99:140,0,924	0/1:27,2:28:99:242,0,669	0/1:37,5:45:18.65:19,0,1526	0/1:22,2:24:99:144,0,592	0/1:28,3:30:99:269,0,923	0/1:14,14:27:99:798,0,309	0/1:8,4:13:99:163,0,357	0/1:45,1:44:99:176,0,1111	0/1:23,3:25:99:580,0,464	0/1:18,3:21:99:207,0,461	0/1:37,5:41:99:490,0,792	0/1:21,14:34:99:561,0,320	0/1:25,4:28:99:401,0,795	0/1:23,0:22:99:226,0,566	0/1:6,0:6:99:184,0,114
chr10	109495431	.	C	CAAGA	18844.28	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-9.519;DP=480;FS=2.513;HRun=0;HaplotypeScore=107.8536;InbreedingCoeff=0.9572;MQ=69.22;MQ0=1;MQRankSum=-10.473;QD=52.79;ReadPosRankSum=-0.168;VQSLOD=5.7006;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,10:19:36.12:843,36,0	0/0:6,0:6:15.05:0,15,252	0/0:14,0:15:39.11:0,39,628	0/0:17,0:17:45.15:0,45,744	1/1:6,14:20:36.12:927,36,0	1/1:1,14:15:42.14:1090,42,0	1/1:3,20:26:57.20:1480,57,0	1/1:3,9:13:30:673,30,0	1/1:5,18:22:51.18:1325,51,0	0/0:25,0:25:66.23:0,66,1182	0/0:18,0:18:51.17:0,51,873	1/1:7,12:19:41.83:1067,42,0	1/1:5,10:16:33.11:807,33,0	1/1:3,8:14:5.33:523,5,0	1/1:3,17:20:45.15:1166,45,0	0/0:40,2:42:33.40:0,33,1860	1/1:6,6:13:27.05:589,27,0	1/1:1,6:7:18.06:452,18,0	1/1:5,3:9:18.06:415,18,0	1/1:3,11:14:27.09:700,27,0	1/1:3,9:12:27.09:680,27,0	1/1:7,8:16:14.18:460,14,0	1/1:4,14:18:48.16:1191,48,0	1/1:0,6:6:11.92:228,12,0	1/1:4,26:32:72.25:1861,72,0	1/1:8,15:23:46.01:1204,46,0	1/1:5,9:15:25.37:697,25,0	1/1:1,6:7:18.06:467,18,0
chr10	109499954	.	CGTGT	C	693.85	PASS	AB=0.896;AC=16;AF=0.308;AN=52;BaseQRankSum=4.006;DP=436;FS=26.334;HRun=0;HaplotypeScore=71.8492;InbreedingCoeff=0.3755;MQ=59.03;MQ0=10;MQRankSum=1.390;QD=3.61;ReadPosRankSum=2.280;VQSLOD=-0.1616;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,9:29:8.76:105,9,0	0/0:6,0:6:3.01:0,3,49	0/0:12,0:5:1.82:0,2,5	./.	0/0:11,0:14:8.75:0,9,89	0/0:12,0:12:8.75:0,9,75	0/0:18,0:21:11.74:0,12,97	0/0:22,0:21:2.29:0,2,6	1/1:3,1:4:3.01:44,3,0	0/0:14,0:13:15.63:0,16,179	0/0:16,0:15:18.05:0,18,315	0/0:10,0:10:14.79:0,15,219	0/0:10,0:11:17.80:0,18,308	0/0:13,0:13:18.02:0,18,283	0/1:16,1:18:32.01:32,0,140	0/0:12,0:11:11.15:0,11,209	0/1:19,7:26:44.90:212,0,45	1/1:13,4:17:15.05:224,15,0	0/0:12,0:13:3.22:0,3,13	1/1:15,2:16:3.01:47,3,0	0/1:23,3:25:18.84:41,0,19	0/0:9,0:9:6.02:0,6,119	0/0:10,0:10:12.04:0,12,234	0/1:18,0:18:3.85:4,0,395	0/0:13,0:20:11.51:0,12,136	1/1:20,3:23:6.01:94,6,0	1/1:11,3:13:2.45:46,2,0	./.
chr10	109500360	.	TTATCTATCTATCTATCTATC	T	6185.15	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.559;DP=776;FS=8.750;HRun=0;HaplotypeScore=344.8569;InbreedingCoeff=0.9068;MQ=70.84;MQ0=8;MQRankSum=-8.969;QD=30.32;ReadPosRankSum=0.542;VQSLOD=1.6427;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:29:18.04:0,18,801	0/0:5,0:11:24.08:0,24,1608	0/0:30,0:18:0.47:0,0,1	0/0:44,0:30:0.47:0,0,1	0/0:17,0:39:68.24:0,68,4689	0/0:11,0:20:15.05:0,15,786	0/0:22,0:21:23.82:0,24,1311	0/0:28,0:28:15.04:0,15,359	0/0:15,0:27:30.08:0,30,1554	0/0:12,0:20:36.12:0,36,1709	0/0:25,0:24:39.13:0,39,3100	1/1:18,21:39:21.07:1116,21,0	1/1:10,14:24:12.04:638,12,0	1/1:14,19:33:18.06:877,18,0	1/1:16,23:39:23.91:1274,24,0	0/0:16,0:28:18.06:0,18,1257	0/0:11,0:22:21.01:0,21,439	0/0:14,0:14:27.08:0,27,1856	0/0:14,0:25:45.15:0,45,3134	0/0:31,0:30:60.21:0,60,4039	0/0:32,0:33:60.21:0,60,4555	1/1:12,13:25:30.10:1255,30,0	1/1:8,18:26:11.26:552,11,0	1/1:9,9:18:9.03:475,9,0	0/0:26,0:26:45.15:0,45,3298	0/0:39,0:42:99:0,105,8670	0/0:33,0:32:78.25:0,78,6280	0/0:20,0:20:36.12:0,36,2215
chr10	109500822	.	C	CCG	2108.07	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-1.173;DP=426;FS=4.795;HRun=0;HaplotypeScore=75.0413;InbreedingCoeff=0.3501;MQ=79.00;MQ0=1;MQRankSum=-0.055;QD=6.15;ReadPosRankSum=2.307;VQSLOD=2.2921;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,1:30:30.44:213,30,0	0/0:3,0:3:2.98:0,3,21	0/0:20,0:15:27.11:0,27,390	0/0:22,0:18:41.73:0,42,409	0/1:9,0:9:3.01:3,0,49	0/1:11,0:11:4.53:5,0,79	0/1:23,0:23:26.07:26,0,93	1/1:20,1:21:27.62:265,28,0	0/1:18,0:18:7.98:8,0,75	0/0:7,0:7:12.49:0,12,144	0/0:6,0:6:11.98:0,12,124	1/1:19,0:19:11.05:78,11,0	1/1:16,0:16:33.64:167,34,0	1/1:13,1:14:20.35:145,20,0	1/1:18,0:18:35.42:204,35,0	0/0:25,0:25:63.09:0,63,677	1/1:29,0:29:52.22:248,52,0	1/1:12,1:13:19.90:187,20,0	1/1:17,0:17:0.51:122,1,0	1/1:7,0:7:11.60:65,12,0	1/1:17,0:17:12.94:84,13,0	0/1:14,0:14:1.43:20,0,1	0/1:7,0:7:8.34:22,0,8	1/1:14,0:14:19.12:95,19,0	0/1:11,0:11:22.39:22,0,74	1/1:10,0:10:25.27:138,25,0	0/1:17,0:17:9.40:137,0,9	0/1:8,0:8:6.22:38,0,6
chr10	109500823	.	C	CG	5119.65	PASS	AB=0.923;AC=38;AF=0.679;AN=56;BaseQRankSum=-9.131;DP=427;FS=23.534;HRun=0;HaplotypeScore=59.4623;InbreedingCoeff=0.4512;MQ=79.69;MQ0=1;MQRankSum=-1.604;QD=14.93;ReadPosRankSum=2.663;VQSLOD=3.9154;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:31:37.01:491,37,0	0/0:2,0:2:2.98:0,3,21	0/0:21,0:16:36.78:0,37,369	0/0:23,0:18:36.13:0,36,362	0/1:8,0:8:7.47:7,0,17	0/1:11,0:11:21.11:21,0,24	0/1:24,0:24:14.73:59,0,15	1/1:5,16:21:32.90:308,33,0	0/1:18,0:18:13.77:44,0,14	0/0:7,0:7:12.49:0,12,133	0/0:6,0:6:11.97:0,12,110	1/1:3,15:19:17.43:220,17,0	1/1:1,15:16:35.94:425,36,0	1/1:1,12:13:21.06:256,21,0	1/1:3,14:17:38.14:499,38,0	0/0:25,0:25:63.06:0,63,638	1/1:3,25:28:57.13:688,57,0	1/1:6,7:13:32.36:335,32,0	1/1:4,13:17:26.67:310,27,0	1/1:1,6:7:12.03:143,12,0	1/1:3,15:18:17.87:229,18,0	1/1:2,12:14:3.81:48,4,0	0/1:1,6:7:2.88:69,0,3	1/1:0,14:14:21.53:259,22,0	0/1:11,0:11:15.75:39,0,16	1/1:1,10:11:26.46:204,26,0	1/1:9,8:17:13.02:334,13,0	1/1:1,7:8:0.95:131,1,0
chr10	109501768	.	C	CT	17792.07	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-10.998;DP=666;FS=0.301;HRun=1;HaplotypeScore=70.8577;InbreedingCoeff=0.9997;MQ=75.69;MQ0=0;MQRankSum=-1.991;QD=41.57;ReadPosRankSum=-0.362;VQSLOD=4.9534;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:37:99:1642,111,0	0/0:11,0:11:27.09:0,27,351	0/0:20,0:20:54.15:0,54,684	0/0:13,0:13:27.88:0,28,298	0/0:37,0:37:99:0,108,1402	0/0:20,0:19:60.20:0,60,779	0/0:14,0:14:36.12:0,36,467	1/1:0,41:41:99:1804,123,0	0/0:25,0:25:72.19:0,72,892	0/0:21,0:21:60.20:0,60,779	0/0:24,0:24:72.23:0,72,935	1/1:0,21:21:57.19:854,57,0	1/1:0,26:26:69.23:1034,69,0	1/1:2,26:28:66.22:989,66,0	1/1:0,27:27:75.25:1124,75,0	0/0:24,0:24:66.21:0,66,857	1/1:0,26:26:75.25:1124,75,0	1/1:1,20:21:57.19:854,57,0	1/1:0,25:25:72.23:1042,72,0	1/1:0,29:29:81.27:1214,81,0	1/1:0,14:14:36.12:540,36,0	1/1:0,16:16:42.14:630,42,0	1/1:0,26:26:75.25:1125,75,0	1/1:1,14:15:36.12:540,36,0	0/0:29,0:29:78.25:0,78,1013	1/1:0,37:37:99:1663,111,0	1/1:1,23:24:69.23:1029,69,0	1/1:0,13:13:39.13:584,39,0
chr10	109505006	.	ACAAT	A	9735.23	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=16.344;DP=740;FS=7.513;HRun=0;HaplotypeScore=135.9345;InbreedingCoeff=0.9980;MQ=58.11;MQ0=2;MQRankSum=-5.671;QD=23.52;ReadPosRankSum=-1.766;VQSLOD=4.0513;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,45:54:93.25:1491,93,0	0/0:7,0:7:21.06:0,21,442	0/0:24,0:21:30.05:0,30,487	0/0:13,0:11:21.07:0,21,438	1/1:3,0:20:38.88:330,39,0	1/1:3,0:23:39.04:361,39,0	1/1:7,0:30:32.90:301,33,0	1/1:14,16:29:44.96:488,45,0	1/1:4,0:19:35.98:326,36,0	0/0:40,0:40:99:0,108,2378	0/0:20,0:20:51.09:0,51,1133	0/0:42,0:42:99:0,102,2171	0/0:23,0:23:60.11:0,60,1188	0/0:23,0:23:53.55:0,54,1249	0/0:29,0:29:69.21:0,69,1523	0/0:28,0:28:57.17:0,57,1246	1/1:4,14:18:27.09:442,27,0	1/1:6,25:31:57.19:933,57,0	1/1:13,7:20:21.06:321,21,0	1/1:9,22:30:68.99:962,69,0	1/1:6,28:34:63.22:1032,63,0	0/0:23,0:23:60.19:0,60,1343	0/0:16,0:16:48.12:0,48,1070	0/0:38,0:38:82.46:0,82,1768	1/1:5,0:29:57:519,57,0	1/1:10,22:32:66.13:951,66,0	1/1:6,20:26:35.96:590,36,0	1/1:3,14:17:42.14:688,42,0
chr10	109507467	.	CT	C	12219.08	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=8.716;DP=694;FS=1.828;HRun=9;HaplotypeScore=85.1437;InbreedingCoeff=0.9188;MQ=72.13;MQ0=1;MQRankSum=-2.200;QD=21.70;ReadPosRankSum=3.090;VQSLOD=5.6093;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:38:93.04:851,93,0	0/0:8,0:8:20.09:0,20,214	0/0:25,0:23:3.27:0,3,308	0/0:20,0:16:17.33:0,17,275	1/1:0,23:23:69.04:631,69,0	1/1:3,21:24:60.02:549,60,0	1/1:2,14:16:1.40:267,1,0	1/1:5,31:36:90.02:818,90,0	1/1:3,20:23:47.45:438,47,0	0/0:24,0:25:59.97:0,60,651	0/0:18,0:19:53.98:0,54,594	1/1:3,34:37:96.04:879,96,0	1/1:2,18:20:48.02:439,48,0	1/1:2,18:20:54.03:494,54,0	1/1:4,27:31:77.72:698,78,0	0/0:33,0:33:87.26:0,87,1004	1/1:3,26:30:68.06:610,68,0	1/1:2,25:27:60.03:549,60,0	1/1:4,14:18:42.02:384,42,0	1/1:2,16:18:48.02:438,48,0	1/1:5,19:24:57.03:522,57,0	1/1:3,17:20:45.02:411,45,0	1/1:2,14:16:32.88:302,33,0	1/1:4,27:31:53.11:588,53,0	1/1:2,33:35:84.04:768,84,0	1/1:4,31:35:61.42:812,61,0	1/1:3,16:19:45.02:412,45,0	1/1:7,15:22:39.01:357,39,0
chr10	109507915	.	T	TG	9214.30	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-3.328;DP=535;FS=6.863;HRun=3;HaplotypeScore=56.0758;InbreedingCoeff=0.9816;MQ=81.47;MQ0=0;MQRankSum=-3.872;QD=40.59;ReadPosRankSum=1.283;VQSLOD=4.4289;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:81.27:1213,81,0	0/0:4,0:4:9.03:0,9,117	0/0:13,0:13:39.12:0,39,495	0/0:18,0:18:51.16:0,51,641	0/0:8,0:8:24.08:0,24,310	0/0:14,0:14:39.13:0,39,506	0/0:26,0:26:78.25:0,78,1011	1/1:0,15:15:45.15:674,45,0	0/0:22,0:22:63.20:0,63,817	0/0:10,0:10:30.10:0,30,388	0/0:3,0:3:9.03:0,9,117	0/0:22,0:22:63.20:0,63,817	0/0:31,0:31:93.30:0,93,1207	0/0:28,0:28:78.25:0,78,1004	0/0:23,0:23:60.18:0,60,765	0/0:19,0:19:57.19:0,57,740	1/1:0,31:31:84.28:1259,84,0	1/1:1,26:28:72.24:1078,72,0	1/1:0,19:19:57.19:852,57,0	1/1:0,9:9:27.09:405,27,0	1/1:0,43:43:99:1663,111,0	0/0:11,0:11:33.11:0,33,428	0/0:7,0:7:21.05:0,21,257	0/0:36,0:36:99:0,105,1362	0/0:13,0:13:39.13:0,39,506	1/1:0,21:21:60.20:900,60,0	1/1:1,15:15:43.05:631,43,0	1/1:0,15:15:36.12:540,36,0
chr10	109511262	.	A	AACCCTAACCC	9437.73	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-7.052;DP=664;FS=2.335;HRun=0;HaplotypeScore=191.4932;InbreedingCoeff=0.9848;MQ=84.79;MQ0=0;MQRankSum=-11.830;QD=138.79;ReadPosRankSum=1.068;VQSLOD=5.5156;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,150,5055	0/0:4,0:4:12.04:0,12,419	0/0:25,0:25:50.38:0,50,1957	0/0:22,0:22:61.42:0,61,1720	1/1:0,4:6:12.04:595,12,0	1/1:2,10:15:33.10:1808,33,0	1/1:0,15:15:45.15:2464,45,0	0/0:25,0:25:69.24:0,69,2031	1/1:1,17:21:51.18:2791,51,0	0/0:22,0:22:66.22:0,66,2095	0/0:14,0:14:39.13:0,39,1363	0/0:37,0:37:99:0,108,3241	0/0:26,0:26:78.27:0,78,2681	0/0:22,0:22:63.22:0,63,2157	0/0:33,0:33:93.31:0,93,3115	0/0:28,0:28:84.29:0,84,2936	0/0:29,0:29:78.19:0,78,2381	0/0:27,0:27:81.26:0,81,2709	0/0:19,0:19:57.18:0,57,1674	0/0:10,0:10:24.08:0,24,718	0/0:50,0:50:99:0,147,4967	0/0:19,0:19:48.16:0,48,1527	0/0:22,0:22:66.20:0,66,2182	0/0:44,0:44:99:0,129,4148	1/1:0,8:11:33.11:1780,33,0	0/0:31,0:31:88.52:0,89,2697	0/0:28,0:28:84.29:0,84,2801	0/0:9,0:9:27.03:0,27,621
chr10	109511704	.	GA	G	420.15	PASS	AB=0.808;AC=10;AF=0.179;AN=56;BaseQRankSum=-1.471;DP=420;FS=4.039;HRun=15;HaplotypeScore=61.0492;InbreedingCoeff=0.2316;MQ=50.37;MQ0=37;MQRankSum=0.301;QD=3.31;ReadPosRankSum=-0.659;VQSLOD=-0.1528;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:21:21.98:0,22,137	0/0:8,0:9:11.80:0,12,86	0/1:15,1:9:15.42:15,0,45	0/1:15,1:9:14.22:14,0,26	0/1:9,7:15:31.74:80,0,32	0/1:9,5:10:8.65:78,0,9	1/1:3,10:13:22.50:140,23,0	0/0:15,0:11:9.09:0,9,53	1/1:14,5:14:24.07:138,24,0	0/0:15,1:14:23.99:0,24,208	0/0:13,0:12:14.50:0,14,98	0/0:20,0:19:10.53:0,11,203	0/0:21,0:18:24.99:0,25,206	0/1:10,2:11:11.91:12,0,122	0/0:17,0:15:28.60:0,29,219	0/0:14,0:12:23:0,23,202	0/0:15,0:9:11.14:0,11,66	0/0:20,0:17:22.29:0,22,140	0/0:12,0:9:4.54:0,5,28	0/0:7,0:7:12.75:0,13,92	0/0:12,0:9:9.33:0,9,36	0/0:7,0:6:6:0,6,53	0/0:13,0:8:12:0,12,105	0/0:18,0:17:34.24:0,34,293	0/1:8,7:12:5.70:94,0,6	0/0:9,0:9:8.52:0,9,58	0/0:13,0:12:1.30:0,1,74	0/0:15,0:10:20.61:0,21,131
chr10	109512398	.	C	CTT	4822.85	PASS	AB=0.839;AC=46;AF=0.821;AN=56;BaseQRankSum=3.217;DP=574;FS=2.243;HRun=8;HaplotypeScore=103.3006;InbreedingCoeff=0.5421;MQ=32.76;MQ0=58;MQRankSum=-5.100;QD=9.24;ReadPosRankSum=-0.694;VQSLOD=1.5243;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:20,5:19:11.51:205,0,12	0/0:10,0:10:21.03:0,21,223	1/1:3,0:1:0.89:2,1,0	0/1:7,0:2:0:0,0,0	1/1:24,13:35:38.31:487,38,0	1/1:11,8:17:17.82:244,18,0	1/1:11,6:15:24.04:353,24,0	1/1:19,8:25:35.91:535,36,0	1/1:12,6:17:16.56:204,17,0	0/0:29,0:27:39.29:0,39,521	0/0:13,0:12:8.73:0,9,100	1/1:16,0:17:11.10:51,11,0	1/1:10,0:18:17.16:56,17,0	0/1:10,0:18:9.40:47,0,9	1/1:18,0:25:22.27:69,22,0	0/1:20,4:23:9.18:9,0,339	1/1:27,6:23:27.07:274,27,0	1/1:18,5:16:17.27:217,17,0	1/1:17,7:22:21.54:334,22,0	1/1:16,3:18:18.32:182,18,0	1/1:4,0:3:0.47:1,0,0	1/1:8,0:16:13.89:46,14,0	1/1:14,0:17:10.51:37,11,0	1/1:8,0:6:0.89:2,1,0	1/1:21,10:29:40.10:489,40,0	1/1:18,10:25:32.35:447,32,0	1/1:15,6:20:25.80:286,26,0	1/1:15,7:19:17.34:244,17,0
chr10	109513081	.	AAAAAAAAAAC	A	2373.88	PASS	AB=0.947;AC=12;AF=0.214;AN=56;BaseQRankSum=2.474;DP=612;FS=12.903;HRun=0;HaplotypeScore=149.0669;InbreedingCoeff=-0.0493;MQ=56.73;MQ0=25;MQRankSum=-1.050;QD=9.57;ReadPosRankSum=-5.078;VQSLOD=-0.4370;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,1:27:33.56:306,0,34	0/0:5,0:5:15.05:0,15,631	0/0:64,0:12:20.29:0,20,181	0/1:55,0:11:28.52:29,0,190	0/0:32,0:30:75.94:0,76,2108	0/0:23,0:19:42.55:0,43,1263	0/0:13,0:11:21.06:0,21,629	0/1:23,0:21:60.30:205,0,60	0/0:11,0:11:27.07:0,27,808	0/0:23,0:21:60.09:0,60,1599	0/0:23,0:23:52.03:0,52,1636	0/0:23,0:22:36.02:0,36,1046	0/0:15,0:14:40.67:0,41,892	0/0:19,0:18:45.03:0,45,888	0/0:22,0:22:61.44:0,61,1498	0/0:24,0:22:60.18:0,60,1927	0/1:25,1:26:7.81:233,0,8	0/1:16,0:12:22.22:50,0,22	0/1:16,2:16:23.83:295,0,24	0/1:11,2:13:25.03:288,0,25	0/1:13,1:13:8.67:246,0,9	0/0:10,0:10:27.05:0,27,638	0/0:15,0:14:36.07:0,36,857	0/0:23,0:23:36.04:0,36,865	0/0:19,0:17:45.04:0,45,1119	0/1:31,1:32:99:527,0,148	1/1:17,0:17:6.14:226,6,0	0/1:6,1:6:93.61:121,0,94
chr10	109513088	.	AAAC	A	4029.43	PASS	AB=0.979;AC=30;AF=0.536;AN=56;BaseQRankSum=3.722;DP=632;FS=29.534;HRun=0;HaplotypeScore=88.1751;InbreedingCoeff=0.2578;MQ=57.62;MQ0=25;MQRankSum=-2.083;QD=8.29;ReadPosRankSum=-5.716;VQSLOD=-0.6486;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:66.67:512,67,0	0/0:8,0:8:24.02:0,24,265	0/1:60,0:13:15.14:15,0,33	0/1:63,0:13:10.09:10,0,42	0/1:26,6:30:6.34:6,0,459	0/0:24,0:21:12.23:0,12,285	0/1:11,0:9:6.45:6,0,140	1/1:32,0:30:60.30:498,60,0	0/0:12,0:12:26.09:0,26,267	0/0:24,0:22:43.17:0,43,516	0/1:21,0:21:9.25:9,0,404	0/0:24,0:23:17.94:0,18,289	0/1:18,0:17:75.51:76,0,176	0/1:16,1:16:79.91:105,0,80	0/1:24,0:24:99:140,0,214	0/0:25,0:23:55.67:0,56,591	1/1:27,0:27:51.99:398,52,0	1/1:15,0:11:20.14:146,20,0	1/1:17,0:15:39.41:299,39,0	1/1:17,0:17:44.91:371,45,0	1/1:14,0:13:32.70:258,33,0	0/0:8,0:8:0.99:0,1,108	0/1:14,0:13:20.34:20,0,149	0/1:21,0:21:56.45:56,0,114	0/0:21,0:19:29.43:0,29,323	1/1:29,0:30:66.84:585,67,0	1/1:18,0:18:50.18:438,50,0	1/1:7,0:6:1.12:80,1,0
chr10	109515192	.	A	ATTTTGGT	4203.48	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=6.781;DP=622;FS=0.000;HRun=0;HaplotypeScore=236.1279;InbreedingCoeff=0.3425;MQ=60.30;MQ0=7;MQRankSum=-4.766;QD=10.06;ReadPosRankSum=-2.903;VQSLOD=1.8104;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:26:6.63:301,0,7	0/0:12,0:13:22.57:0,23,296	0/0:46,0:19:15.86:0,16,281	0/0:20,0:4:0.38:0,0,35	0/0:18,0:23:11.77:0,12,144	0/1:16,0:18:3.13:3,0,126	0/0:17,0:19:10.84:0,11,94	0/1:37,0:36:23.34:156,0,23	0/1:13,0:15:26.39:26,0,108	0/0:22,0:22:54.72:0,55,705	0/0:20,0:20:27.13:0,27,463	1/1:23,0:23:31.87:454,32,0	1/1:20,0:20:32.62:548,33,0	1/1:19,0:18:25.99:430,26,0	1/1:26,0:26:34.05:511,34,0	0/0:20,0:20:9.89:0,10,345	1/1:18,0:18:10.59:176,11,0	1/1:19,0:19:9.45:141,9,0	0/1:25,0:24:9.65:230,0,10	1/1:31,0:29:9.12:406,9,0	0/0:6,0:4:2.16:0,2,5	1/1:6,0:15:17.71:190,18,0	1/1:20,0:20:10.99:142,11,0	1/1:2,14:22:6.02:153,6,0	0/1:16,0:20:9.54:10,0,171	0/1:34,0:32:75.56:127,0,76	0/1:27,0:26:5.15:199,0,5	0/0:14,0:14:0.30:0,0,24
chr10	109515196	.	T	TGG	504.27	PASS	AB=0.844;AC=9;AF=0.161;AN=56;BaseQRankSum=-2.020;DP=619;FS=36.872;HRun=0;HaplotypeScore=113.5542;InbreedingCoeff=-0.1655;MQ=53.97;MQ0=7;MQRankSum=-3.151;QD=2.80;ReadPosRankSum=2.058;VQSLOD=0.5084;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:35.10:0,35,291	0/0:13,0:13:30.25:0,30,357	0/0:48,0:13:17.48:0,17,266	0/1:21,0:4:2.12:2,0,35	0/0:23,0:23:31.19:0,31,217	0/0:19,0:19:25.47:0,25,179	0/0:19,0:19:13.92:0,14,97	0/0:37,0:36:48.21:0,48,433	0/1:16,0:15:8.46:8,0,48	0/0:24,0:23:58.58:0,59,798	0/0:21,0:21:57.46:0,57,718	0/1:14,10:24:99:163,0,132	0/1:7,11:19:80.82:192,0,81	0/1:8,12:19:99:147,0,103	0/1:14,11:25:84.61:85,0,289	0/0:19,0:19:46.54:0,47,546	0/0:18,0:18:27.02:0,27,255	0/0:7,0:19:17.41:0,17,201	0/0:25,0:24:46.28:0,46,481	0/0:27,0:25:36.11:0,36,335	0/0:6,0:4:4.48:0,4,12	0/1:13,0:13:7.39:7,0,92	0/0:11,7:19:24.35:0,24,211	0/1:19,0:19:24.98:25,0,33	0/1:22,0:21:3.56:4,0,138	0/0:32,0:30:40.83:0,41,384	0/0:28,0:27:30.98:0,31,229	0/0:15,0:13:16.37:0,16,132
chr10	109516394	.	G	GGCCTGTT	32773.57	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-4.288;DP=665;FS=19.389;HRun=0;HaplotypeScore=155.4617;InbreedingCoeff=0.9834;MQ=69.20;MQ0=0;MQRankSum=-12.549;QD=58.52;ReadPosRankSum=-1.675;VQSLOD=2.9152;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,14:31:54.10:1728,54,0	0/0:11,0:11:30.10:0,30,691	0/0:16,0:16:21.06:0,21,405	0/0:23,0:23:45.10:0,45,917	1/1:8,16:25:48.03:1350,48,0	1/1:9,12:22:36.04:1151,36,0	1/1:17,13:30:51.18:1856,51,0	1/1:23,10:36:60.18:1767,60,0	1/1:11,14:26:51.13:1822,51,0	0/0:21,0:21:51.18:0,51,1213	0/0:12,0:12:36.11:0,36,812	1/1:18,19:37:81.26:2730,81,0	1/1:17,19:36:87.28:2989,87,0	1/1:13,19:33:63.22:2364,63,0	1/1:14,18:31:72.15:2341,72,0	0/0:22,0:22:51.18:0,51,1217	1/1:17,5:23:30.57:1036,31,0	1/1:5,6:13:24.08:815,24,0	1/1:20,4:25:31.34:917,31,0	1/1:6,11:19:37.28:1019,37,0	1/1:24,14:42:31.31:991,31,0	1/1:8,14:22:51.09:1662,51,0	1/1:6,9:16:36.08:1188,36,0	1/1:18,3:21:14.99:320,15,0	1/1:5,16:22:45.02:1416,45,0	1/1:10,12:22:48.16:1623,48,0	1/1:8,13:21:36.12:1354,36,0	1/1:3,3:6:9.03:336,9,0
chr10	109516455	.	G	GT	5786.13	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-1.756;DP=575;FS=5.088;HRun=1;HaplotypeScore=88.5495;InbreedingCoeff=0.9971;MQ=88.99;MQ0=0;MQRankSum=-2.592;QD=38.83;ReadPosRankSum=3.849;VQSLOD=5.4441;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:75.22:0,75,954	0/0:8,0:8:24.08:0,24,311	0/0:21,0:21:63.16:0,63,784	0/0:27,0:27:80.61:0,81,949	0/0:9,0:9:18.06:0,18,233	0/0:29,0:29:81.26:0,81,1050	0/0:20,0:20:54.18:0,54,700	0/0:21,0:21:63.18:0,63,789	0/0:28,0:28:78.25:0,78,1011	0/0:17,0:17:45.15:0,45,584	0/0:11,0:11:30.10:0,30,383	1/1:3,32:35:84.28:1257,84,0	1/1:2,30:32:87.15:1297,87,0	1/1:1,22:23:66.22:987,66,0	1/1:2,19:21:57.19:853,57,0	0/0:22,0:22:66.20:0,66,844	0/0:28,0:28:66.21:0,66,854	0/0:16,0:16:42.14:0,42,543	0/0:18,0:18:51.17:0,51,662	0/0:12,0:12:30.10:0,30,387	0/0:43,0:43:90.29:0,90,1167	1/1:2,8:10:24.08:359,24,0	1/1:1,10:11:24.08:360,24,0	1/1:0,17:17:45.15:673,45,0	0/0:14,0:14:36.10:0,36,451	0/0:25,0:25:75.23:0,75,959	0/0:18,0:18:48.16:0,48,621	0/0:10,0:10:30.10:0,30,388
chr10	109518382	.	A	AAC	1711.44	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=-5.377;DP=590;FS=8.591;HRun=0;HaplotypeScore=77.1477;InbreedingCoeff=0.8391;MQ=50.32;MQ0=37;MQRankSum=2.372;QD=10.70;ReadPosRankSum=6.591;VQSLOD=2.1975;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:34:92.53:0,93,772	0/1:6,0:5:1.15:1,0,41	0/0:10,0:3:2.40:0,2,44	0/1:7,0:3:0.40:0,0,21	0/0:19,0:18:30.29:0,30,255	0/0:25,0:25:36.39:0,36,309	0/0:25,0:18:14.35:0,14,223	0/0:29,0:26:65.02:0,65,528	0/0:12,0:11:14.92:0,15,130	0/0:15,0:14:38.60:0,39,280	0/0:14,0:12:26.32:0,26,174	1/1:2,12:16:6.25:200,6,0	1/1:2,14:18:19.72:201,20,0	1/1:5,18:23:17.78:196,18,0	1/1:3,18:20:22.94:324,23,0	0/0:20,0:18:22.89:0,23,247	0/0:39,0:34:69.71:0,70,646	0/0:23,0:20:50.49:0,50,506	0/0:25,0:19:44.63:0,45,422	0/0:19,0:16:38.64:0,39,318	0/0:23,0:20:56.78:0,57,557	1/1:2,12:15:22.30:231,22,0	1/1:3,16:18:17.81:241,18,0	1/1:8,22:28:35.64:506,36,0	0/0:15,0:12:34.80:0,35,252	0/0:27,0:25:65.82:0,66,555	0/0:34,0:29:56.52:0,57,502	0/0:11,0:7:17.89:0,18,133
chr10	109518528	.	T	TA	2294.27	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=1.033;DP=596;FS=10.284;HRun=10;HaplotypeScore=77.0686;InbreedingCoeff=0.9491;MQ=63.34;MQ0=1;MQRankSum=0.765;QD=21.24;ReadPosRankSum=0.563;VQSLOD=4.1040;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:95.88:0,96,788	0/0:10,0:10:23.97:0,24,196	0/0:18,0:15:14.91:0,15,126	0/0:10,0:9:11.50:0,11,84	1/1:4,17:21:26.21:475,26,0	1/1:3,19:22:54.14:575,54,0	1/1:4,17:21:5.79:461,6,0	0/0:27,0:27:59.87:0,60,485	1/1:4,21:25:14.54:559,15,0	0/0:24,0:24:56.92:0,57,466	0/0:12,0:12:32.96:0,33,270	0/0:26,0:26:62.85:0,63,510	0/0:17,1:18:12.89:0,13,303	0/0:19,0:19:44.89:0,45,361	0/0:23,0:23:59.92:0,60,493	0/0:23,0:22:56.86:0,57,459	0/0:29,0:30:73.93:0,74,597	0/0:13,0:13:38.91:0,39,314	0/0:17,0:19:46.01:0,46,354	0/0:25,0:25:56.86:0,57,460	0/0:22,0:22:59.90:0,60,489	0/0:21,0:21:50.93:0,51,419	0/0:12,0:12:29.95:0,30,246	0/0:17,0:17:41.92:0,42,342	1/1:2,17:19:17.46:391,17,0	0/0:35,0:35:80.84:0,81,658	0/0:32,0:32:77.87:0,78,639	0/0:17,0:17:47.89:0,48,388
chr10	109519460	.	A	ATT	11896.70	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-13.514;DP=570;FS=4.079;HRun=10;HaplotypeScore=62.5710;InbreedingCoeff=0.9803;MQ=63.34;MQ0=1;MQRankSum=-0.111;QD=34.48;ReadPosRankSum=0.987;VQSLOD=5.4842;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,31:37:83.76:1201,84,0	0/0:12,0:12:27.06:0,27,275	0/0:12,0:11:10.95:0,11,143	0/0:10,0:10:30.05:0,30,292	1/1:5,20:25:61.98:875,62,0	1/1:2,23:25:63.21:938,63,0	1/1:4,14:19:41.63:590,42,0	1/1:4,12:17:8.58:469,9,0	1/1:2,16:18:47.52:680,48,0	0/0:33,0:33:81.13:0,81,819	0/0:20,0:20:48.08:0,48,488	0/0:15,0:15:39.05:0,39,390	0/0:25,0:25:66.12:0,66,671	0/0:16,0:17:44.82:0,45,432	0/0:18,0:18:47.83:0,48,488	0/0:20,0:20:57.12:0,57,580	1/1:5,27:32:78.26:1140,78,0	1/1:4,27:33:71.73:1038,72,0	1/1:2,16:20:53.14:713,53,0	1/1:3,21:25:65.62:868,66,0	1/1:0,4:4:12.04:179,12,0	0/0:7,0:7:18.02:0,18,183	0/0:20,0:20:51.10:0,51,519	0/0:15,0:15:45.10:0,45,458	1/1:0,26:28:78.25:1131,78,0	1/1:4,26:30:47.72:1066,48,0	1/1:5,15:19:39.13:579,39,0	1/1:1,10:12:30.09:431,30,0
chr10	109525267	.	A	AC	19875.44	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-13.289;DP=729;FS=3.873;HRun=5;HaplotypeScore=70.3349;InbreedingCoeff=0.9761;MQ=84.33;MQ0=0;MQRankSum=-4.872;QD=33.69;ReadPosRankSum=4.065;VQSLOD=5.4018;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,35:42:87.28:1144,87,0	0/0:19,0:19:54.14:0,54,580	0/0:24,0:24:5.49:0,5,512	0/0:29,0:29:61.08:0,61,592	1/1:0,23:24:66.17:841,66,0	1/1:3,13:16:39.13:512,39,0	1/1:0,32:32:81.26:1066,81,0	1/1:3,30:33:84.23:1064,84,0	1/1:2,26:28:72.23:946,72,0	0/0:22,0:22:60.13:0,60,636	0/0:17,0:17:48.12:0,48,516	1/1:3,31:34:81.26:1066,81,0	1/1:1,21:23:66.21:868,66,0	1/1:3,30:33:81.26:1066,81,0	1/1:1,24:25:63.20:823,63,0	0/0:28,0:28:72.16:0,72,764	1/1:0,29:29:81.26:1066,81,0	1/1:3,25:28:72.23:947,72,0	1/1:1,20:21:60.13:739,60,0	1/1:0,21:22:60.15:768,60,0	1/1:1,58:59:99:2089,160,0	1/1:1,10:11:30.10:395,30,0	1/1:0,18:18:39:512,39,0	1/1:0,23:23:69.22:908,69,0	1/1:2,16:18:54.17:695,54,0	1/1:2,17:19:54.17:705,54,0	1/1:4,36:40:93.30:1223,93,0	1/1:0,12:12:33.11:434,33,0
chr10	109529811	.	G	GCCTCTT	16121.90	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=14.249;DP=567;FS=5.500;HRun=0;HaplotypeScore=151.0806;InbreedingCoeff=0.9599;MQ=84.21;MQ0=0;MQRankSum=-17.112;QD=73.62;ReadPosRankSum=0.771;VQSLOD=5.2788;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,14:20:54.08:1592,54,0	0/0:10,0:10:30.06:0,30,687	0/0:23,0:23:59.87:0,60,1260	0/0:27,0:27:74.84:0,75,1604	1/1:2,12:14:16.08:882,16,0	1/1:2,15:17:26.24:1397,26,0	1/1:2,15:17:51.09:1386,51,0	1/1:6,14:20:50.02:1488,50,0	1/1:1,19:21:38.28:1796,38,0	0/0:32,0:32:90.28:0,90,2187	0/0:13,0:13:39.11:0,39,897	0/0:32,0:32:96.26:0,96,2153	0/0:28,0:28:84.29:0,84,2114	0/0:35,0:35:99:0,105,2510	0/0:39,0:39:99:0,117,2850	0/0:24,0:24:72.25:0,72,1845	1/1:2,11:13:36.11:1025,36,0	1/1:1,8:10:27.09:827,27,0	1/1:4,6:10:0.81:646,1,0	1/1:0,10:11:33.05:892,33,0	1/1:6,11:17:16.61:702,17,0	0/0:28,0:28:75.24:0,75,1844	0/0:25,0:25:75.24:0,75,1865	0/0:32,0:32:96.33:0,96,2428	1/1:3,10:13:25.86:922,26,0	1/1:5,10:15:15.20:991,15,0	1/1:2,13:15:45.15:1287,45,0	1/1:3,3:6:16.33:288,16,0
chr10	109529812	.	A	AGC	8132.08	PASS	AB=0.667;AC=29;AF=0.518;AN=56;BaseQRankSum=17.979;DP=635;FS=1.322;HRun=0;HaplotypeScore=179.1007;InbreedingCoeff=0.9204;MQ=80.87;MQ0=0;MQRankSum=-18.332;QD=28.63;ReadPosRankSum=0.894;VQSLOD=6.0420;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,14:26:51.16:698,51,0	0/0:10,0:10:30.10:0,30,474	0/0:23,0:23:63.15:0,63,908	0/0:27,0:28:52.85:0,53,1051	1/1:6,12:18:45.48:475,45,0	1/1:6,14:21:57.67:660,58,0	1/1:5,15:20:17.96:618,18,0	1/1:14,14:28:46.67:847,47,0	1/1:4,19:23:61.21:791,61,0	0/0:32,0:32:96.23:0,96,1483	0/0:13,0:13:39.11:0,39,588	0/0:30,0:30:90.27:0,90,1392	0/0:29,0:29:84.29:0,84,1358	0/0:36,0:36:99:0,105,1662	0/0:40,0:40:99:0,117,1858	0/0:25,0:25:72.25:0,72,1175	1/1:5,11:16:34.19:538,34,0	1/1:2,8:10:28.43:327,28,0	1/1:9,6:15:6.21:423,6,0	1/1:4,10:15:5.06:242,5,0	1/1:14,11:25:32.25:403,32,0	0/0:28,0:28:78.24:0,78,1221	0/0:25,0:25:75.24:0,75,1198	0/0:32,0:32:96.33:0,96,1563	1/1:6,10:16:43.96:456,44,0	1/1:13,10:23:65.54:804,66,0	1/1:6,13:22:46.42:723,46,0	0/1:3,3:6:2.93:128,0,3
chr10	109529813	.	C	CT	1242.48	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=19.304;DP=631;FS=2.582;HRun=0;HaplotypeScore=191.7236;InbreedingCoeff=0.5228;MQ=80.74;MQ0=0;MQRankSum=-18.299;QD=4.39;ReadPosRankSum=2.061;VQSLOD=3.3846;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:17.12:184,17,0	0/0:10,0:10:30.06:0,30,397	0/0:22,0:22:56.82:0,57,742	0/0:28,0:28:47.55:0,48,915	0/1:18,0:18:31.06:31,0,56	0/1:21,0:21:44.54:80,0,45	1/1:19,0:19:42.24:143,42,0	0/1:28,0:28:46.93:128,0,47	1/1:23,0:23:24.75:131,25,0	0/0:32,0:32:93.30:0,93,1270	0/0:14,0:14:36.12:0,36,504	0/0:29,0:29:87.28:0,87,1199	0/0:29,0:29:87.23:0,87,1177	0/0:36,0:36:99:0,108,1477	0/0:39,0:39:99:0,114,1594	0/0:25,0:25:75.22:0,75,1029	1/1:16,0:16:34.16:121,34,0	1/1:11,0:11:22.72:85,23,0	0/1:14,0:14:37.94:54,0,38	1/1:16,0:16:3.18:103,3,0	1/1:20,4:25:9.85:98,10,0	0/0:27,0:27:78.25:0,78,1073	0/0:25,0:25:72.24:0,72,1006	0/0:32,0:32:96.32:0,96,1342	0/1:16,0:16:44.37:44,0,121	1/1:23,0:23:4.85:111,5,0	1/1:21,0:21:32.07:126,32,0	0/1:6,0:6:5.55:6,0,30
chr10	109531277	.	GA	G	2273.98	PASS	AB=0.926;AC=11;AF=0.196;AN=56;BaseQRankSum=4.154;DP=543;FS=12.277;HRun=4;HaplotypeScore=68.3080;InbreedingCoeff=0.8890;MQ=76.54;MQ0=1;MQRankSum=0.063;QD=17.23;ReadPosRankSum=2.005;VQSLOD=2.2871;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:59.86:0,60,520	0/0:10,0:10:22.76:0,23,314	0/1:23,2:21:3.41:3,0,363	0/0:22,0:15:5.96:0,6,150	1/1:5,13:18:39.85:408,40,0	1/1:0,18:18:27.08:331,27,0	1/1:1,26:27:54.15:645,54,0	0/0:22,0:22:42.69:0,43,339	1/1:15,12:27:74.37:733,74,0	0/0:21,0:21:36.33:0,36,486	0/0:15,2:17:26.22:0,26,393	0/0:19,0:19:54.15:0,54,700	0/0:13,0:13:20.83:0,21,387	0/0:24,0:24:58.14:0,58,781	0/0:16,0:16:37.37:0,37,497	0/0:22,0:22:58.90:0,59,702	0/0:27,1:28:46.22:0,46,743	0/0:23,0:23:53.87:0,54,469	0/0:22,0:22:47.45:0,47,439	0/0:16,0:16:46.44:0,46,385	0/0:11,0:11:15.01:0,15,162	0/0:16,0:16:24.86:0,25,394	0/0:16,0:16:21.85:0,22,387	0/0:22,0:22:66.08:0,66,795	1/1:1,16:17:27.08:329,27,0	0/0:12,0:12:15.36:0,15,205	0/0:22,0:21:44.95:0,45,431	0/0:10,0:10:29.97:0,30,269
chr10	109531279	.	AAC	A	466.32	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=8.195;DP=532;FS=0.480;HRun=0;HaplotypeScore=81.3642;InbreedingCoeff=0.7259;MQ=76.23;MQ0=1;MQRankSum=-1.311;QD=4.32;ReadPosRankSum=2.616;VQSLOD=2.2705;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:62.98:0,63,716	0/0:10,0:10:30.06:0,30,448	0/0:24,0:20:27.01:0,27,512	0/0:22,0:15:20.93:0,21,270	1/1:15,2:17:22.90:162,23,0	0/1:20,0:20:13.18:13,0,37	1/1:27,0:27:25.86:81,26,0	0/0:20,0:20:47.81:0,48,457	1/1:24,2:26:50.75:348,51,0	0/0:18,0:18:45.03:0,45,695	0/0:16,0:16:44.90:0,45,633	0/0:19,0:19:54.16:0,54,955	0/0:13,0:13:38.62:0,39,543	0/0:22,0:22:66.05:0,66,1129	0/0:16,0:16:48.01:0,48,723	0/0:21,0:21:62.99:0,63,952	0/0:28,0:28:75.89:0,76,1070	0/0:23,0:23:54.01:0,54,630	0/0:19,0:19:48.07:0,48,596	0/0:16,0:16:47.99:0,48,531	0/0:11,0:11:15.02:0,15,206	0/0:18,0:18:50.94:0,51,673	0/0:13,0:13:38.91:0,39,607	0/0:24,0:24:72.11:0,72,1123	0/1:18,0:18:9.95:15,0,10	0/0:14,0:14:38.85:0,39,398	0/0:20,0:19:48.03:0,48,613	0/0:10,0:10:30.01:0,30,337
chr10	109531280	.	A	AC	1416.34	PASS	AB=0.681;AC=13;AF=0.232;AN=56;BaseQRankSum=-4.761;DP=529;FS=9.417;HRun=10;HaplotypeScore=72.5621;InbreedingCoeff=0.4539;MQ=77.10;MQ0=1;MQRankSum=-0.530;QD=8.23;ReadPosRankSum=-3.450;VQSLOD=0.8003;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,8:26:11.57:12,0,48	0/0:10,0:10:17.96:0,18,147	0/0:24,0:21:16.23:0,16,145	0/0:20,0:15:9.36:0,9,113	0/0:17,0:17:27.39:0,27,107	0/0:20,0:20:27.66:0,28,126	0/0:27,0:27:44.56:0,45,179	1/1:12,8:20:14.86:134,15,0	0/0:26,0:26:31.82:0,32,125	0/0:15,0:17:28.95:0,29,221	0/0:15,0:15:26.75:0,27,200	0/0:20,0:20:35.90:0,36,295	0/0:11,0:13:19:0,19,135	0/0:20,0:22:48.47:0,48,365	0/0:15,0:16:28.96:0,29,224	0/0:19,0:21:30.98:0,31,233	0/1:14,14:28:73.81:347,0,74	1/1:9,12:22:23.87:228,24,0	0/1:10,9:19:10.79:202,0,11	0/1:5,9:14:14.32:155,0,14	0/0:5,8:13:2.97:0,3,25	0/0:16,0:18:28.89:0,29,217	0/0:11,0:13:17.99:0,18,196	0/0:24,0:24:41.81:0,42,339	0/0:18,0:18:25.83:0,26,109	0/1:6,6:13:32.24:100,0,32	1/1:4,16:19:11.49:321,11,0	1/1:6,4:10:9.01:88,9,0
chr10	109532268	.	C	CAG	10901.43	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-11.365;DP=614;FS=19.295;HRun=0;HaplotypeScore=69.9712;InbreedingCoeff=0.9926;MQ=78.27;MQ0=0;MQRankSum=-1.508;QD=41.61;ReadPosRankSum=1.632;VQSLOD=4.7854;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,31:37:90.31:1542,90,0	0/0:9,0:9:24.07:0,24,305	0/0:16,0:16:30.10:0,30,392	0/0:18,0:18:45.12:0,45,576	0/0:17,0:17:45.15:0,45,599	0/0:17,0:17:42.11:0,42,528	0/0:28,0:28:72.23:0,72,943	1/1:3,18:21:51.17:849,51,0	0/0:25,0:25:69.19:0,69,899	0/0:21,0:21:48.16:0,48,638	0/0:6,0:6:12.04:0,12,151	0/0:35,0:35:81.27:0,81,1077	0/0:23,0:23:66.22:0,66,878	0/0:17,0:17:48.16:0,48,639	0/0:27,0:27:69.23:0,69,917	0/0:35,0:35:96.31:0,96,1263	1/1:2,34:36:99:1714,99,0	1/1:0,18:20:45.15:779,45,0	1/1:3,16:19:48.14:783,48,0	1/1:1,13:14:39.13:675,39,0	1/1:3,50:56:99:2234,129,0	0/0:13,0:13:30.10:0,30,399	0/0:6,0:6:15.05:0,15,200	0/0:22,0:22:63.21:0,63,839	0/0:17,0:17:36.12:0,36,480	1/1:5,16:21:48.16:818,48,0	1/1:1,19:20:48.16:831,48,0	1/1:1,16:17:39.13:676,39,0
chr10	109536588	.	AACATACACATATACATACATACACACAC	A	8210.01	PASS	AB=0.677;AC=17;AF=0.304;AN=56;BaseQRankSum=8.034;DP=947;FS=31.098;HRun=0;HaplotypeScore=609.6681;InbreedingCoeff=0.7417;MQ=53.18;MQ0=27;MQRankSum=-7.798;QD=47.73;ReadPosRankSum=-5.057;VQSLOD=0.0757;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,1:15:32.94:513,33,0	0/0:25,0:25:75.26:0,75,5376	0/0:45,0:13:33.11:0,33,1559	0/0:32,0:15:44.98:0,45,2021	0/0:18,0:18:24.24:0,24,1561	0/0:28,0:28:63.20:0,63,3362	0/0:32,0:32:77.25:0,77,5054	0/1:7,19:23:5.37:1167,0,5	0/0:45,0:44:99:0,99,6247	0/0:88,0:88:99:0,259,20241	0/0:32,0:32:90.31:0,90,5903	0/0:47,0:47:99:0,102,7112	0/0:53,0:52:99:0,138,9607	0/0:67,0:66:99:0,162,11033	0/0:56,0:55:99:0,138,9446	0/0:58,0:58:99:0,172,13013	1/1:9,0:9:18.90:428,19,0	0/1:6,1:7:99:569,0,219	1/1:8,0:4:9.03:408,9,0	1/1:19,1:20:14.99:295,15,0	1/1:19,0:18:8.78:74,9,0	0/0:46,0:46:99:0,117,7816	0/0:29,0:29:69.24:0,69,4569	0/0:37,0:36:78.74:0,79,4763	0/0:37,0:37:90.31:0,90,4841	0/1:8,24:33:99:2176,0,301	1/1:24,2:26:45.11:1679,45,0	1/1:7,2:9:27.06:901,27,0
chr10	109536589	.	A	AC	2388.33	PASS	AB=0.793;AC=16;AF=0.286;AN=56;BaseQRankSum=11.738;DP=948;FS=25.390;HRun=1;HaplotypeScore=226.5557;InbreedingCoeff=0.5727;MQ=53.18;MQ0=27;MQRankSum=-4.846;QD=14.30;ReadPosRankSum=-3.351;VQSLOD=0.4152;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,11:15:29.84:292,30,0	0/0:25,0:25:75.22:0,75,954	0/0:45,0:13:33.07:0,33,382	0/0:32,0:15:42.13:0,42,518	0/0:18,0:18:26.99:0,27,327	0/0:30,0:30:59.97:0,60,684	0/0:32,0:32:78.19:0,78,991	1/1:23,1:21:1.40:423,1,0	0/0:45,0:44:98.91:0,99,1134	0/0:89,0:89:99:0,259,3312	0/0:32,0:32:90.26:0,90,1137	0/0:45,0:45:99:0,102,1307	0/0:54,0:53:99:0,138,1774	0/0:67,0:66:99:0,163,2024	0/0:56,0:55:99:0,138,1703	0/0:59,0:59:99:0,171,2156	1/1:5,3:8:14.95:164,15,0	0/1:4,3:7:59.20:154,0,59	0/1:5,2:3:11.53:77,0,12	1/1:10,9:20:5.91:143,6,0	1/1:7,12:18:7.57:44,8,0	0/0:47,0:47:99:0,118,1504	0/0:29,0:29:68.85:0,69,895	0/0:38,0:37:75.13:0,75,937	0/0:38,0:38:90.04:0,90,1084	0/1:33,0:33:65.35:651,0,65	0/1:14,11:25:92.34:273,0,92	1/1:5,4:9:27.06:349,27,0
chr10	109536590	.	CATACACATATA	C	2987.88	PASS	AB=0.954;AC=16;AF=0.286;AN=56;BaseQRankSum=12.049;DP=937;FS=23.200;HRun=0;HaplotypeScore=363.1929;InbreedingCoeff=0.6131;MQ=53.11;MQ0=25;MQRankSum=-5.267;QD=19.15;ReadPosRankSum=-3.753;VQSLOD=0.8473;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,1:15:30.23:273,30,0	0/0:25,0:25:75.26:0,75,4005	0/0:45,0:15:39.13:0,39,1687	0/0:33,0:15:45.11:0,45,1898	0/0:18,0:18:25.35:0,25,1114	0/0:30,0:30:66.21:0,66,2742	0/0:32,0:32:78.27:0,78,3884	0/1:23,0:20:49.62:466,0,50	0/0:45,0:44:99:0,99,4714	0/0:88,0:88:99:0,261,13858	0/0:33,0:33:96.33:0,96,4447	0/0:45,0:45:99:0,102,5269	0/0:55,0:54:99:0,145,7273	0/0:66,0:65:99:0,162,8203	0/0:56,0:55:99:0,138,6940	0/0:58,0:58:99:0,175,9023	1/1:4,3:7:15:216,15,0	0/1:6,1:7:99:252,0,221	1/1:5,0:3:8.90:128,9,0	1/1:16,0:17:14.69:165,15,0	1/1:16,0:16:6.63:41,7,0	0/0:47,0:47:99:0,120,6190	0/0:29,0:29:72.25:0,72,3570	0/0:38,0:37:81.75:0,82,3903	0/0:37,0:37:90.31:0,90,3998	0/1:30,2:32:99:828,0,348	0/1:23,0:23:99:406,0,186	1/1:8,1:9:26.99:402,27,0
chr10	109536618	.	CCCT	C	273.02	PASS	AB=0.878;AC=7;AF=0.125;AN=56;BaseQRankSum=6.575;DP=938;FS=9.503;HRun=0;HaplotypeScore=308.9049;InbreedingCoeff=-0.1320;MQ=51.68;MQ0=8;MQRankSum=-6.178;QD=1.92;ReadPosRankSum=-2.645;VQSLOD=0.0855;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,1:15:30.04:30,0,68	0/0:20,0:20:60.21:0,60,1367	0/0:45,1:9:24.07:0,24,419	0/1:38,3:13:32.26:32,0,272	0/0:16,0:16:18.09:0,18,278	0/0:27,0:27:51.55:0,52,518	0/0:26,0:26:47.63:0,48,812	0/0:30,0:29:50.91:0,51,615	0/0:44,0:44:79.45:0,79,1179	0/0:83,0:83:99:0,241,5585	0/0:25,0:25:75.26:0,75,1741	0/0:53,0:53:99:0,120,1706	0/0:58,0:57:99:0,144,2162	0/0:65,0:64:99:0,150,2020	0/0:62,0:61:99:0,133,1674	0/0:62,0:62:99:0,181,4199	0/1:3,6:9:54.79:64,0,55	0/1:8,1:9:28.06:28,0,216	0/0:4,1:5:8.61:0,9,95	0/0:15,2:16:14.37:0,14,135	0/0:12,5:18:2.83:0,3,8	0/0:46,0:46:99:0,107,1391	0/0:28,0:28:51.98:0,52,714	0/0:31,0:31:66.15:0,66,859	0/0:34,0:34:67.48:0,67,698	0/1:43,2:45:99:118,0,621	0/1:16,0:16:34.45:34,0,214	0/1:4,1:5:54.27:96,0,54
chr10	109536621	.	TAC	T	9643.58	PASS	AB=0.749;AC=41;AF=0.732;AN=56;BaseQRankSum=12.535;DP=918;FS=1.134;HRun=0;HaplotypeScore=260.5259;InbreedingCoeff=0.4350;MQ=51.30;MQ0=9;MQRankSum=-3.539;QD=13.07;ReadPosRankSum=-0.172;VQSLOD=4.2527;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,8:15:9.22:98,9,0	0/0:21,1:22:20.49:0,20,768	1/1:45,0:10:2.74:12,3,0	0/1:41,0:12:1.06:1,0,59	0/0:8,0:15:2.96:0,3,20	0/1:7,0:25:23.40:29,0,23	0/1:17,0:26:6.68:7,0,24	1/1:17,11:27:16.80:316,17,0	0/1:13,0:43:3.77:60,0,4	0/0:83,0:84:99:0,196,3046	0/1:25,1:26:4.13:4,0,893	1/1:10,44:54:96.30:1170,96,0	1/1:13,45:58:99:1283,105,0	1/1:8,50:58:95.67:1272,96,0	1/1:3,52:55:99:1353,111,0	0/0:55,3:59:99:0,105,2173	1/1:8,2:10:5.85:79,6,0	1/1:3,7:10:23.38:275,23,0	0/1:4,2:5:7.57:97,0,8	1/1:2,15:16:16.66:201,17,0	0/1:8,10:18:0.44:0,0,1	1/1:5,37:44:88.22:1066,88,0	1/1:5,23:28:44.99:547,45,0	1/1:5,25:30:51.16:623,51,0	1/1:12,1:32:15.71:69,16,0	1/1:24,18:42:1.08:595,1,0	1/1:1,15:16:29.47:325,29,0	1/1:3,4:7:14.87:161,15,0
chr10	109536641	.	CACAA	C	3744.76	PASS	AB=0.987;AC=26;AF=0.464;AN=56;BaseQRankSum=12.900;DP=974;FS=0.776;HRun=0;HaplotypeScore=324.3064;InbreedingCoeff=0.8164;MQ=51.38;MQ0=13;MQRankSum=-12.388;QD=10.67;ReadPosRankSum=0.146;VQSLOD=2.4425;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:6.24:131,6,0	0/0:21,0:21:63.19:0,63,1459	0/0:45,0:10:20.09:0,20,446	0/0:41,0:18:28.25:0,28,885	0/0:15,1:16:0.89:0,1,3	1/1:28,1:29:9.48:156,9,0	1/1:31,0:31:7.32:62,7,0	1/1:32,0:29:13.98:349,14,0	1/1:48,1:49:29.87:290,30,0	0/0:82,0:82:99:0,239,5820	0/0:24,0:24:66.16:0,66,1614	0/0:54,0:54:99:0,132,2716	0/0:53,0:52:99:0,129,2769	0/0:61,0:60:99:0,139,3002	0/0:65,0:65:99:0,150,3231	0/0:58,0:58:99:0,159,3693	1/1:13,0:13:21.38:220,21,0	1/1:12,0:12:25.60:314,26,0	1/1:13,0:12:24.53:220,25,0	1/1:22,0:21:8.62:276,9,0	0/1:37,1:37:1.65:42,0,2	0/0:47,0:47:99:0,115,2313	0/0:27,0:27:56.24:0,56,1110	0/0:28,0:28:62.89:0,63,1247	1/1:28,1:29:17.95:187,18,0	0/1:41,0:41:11.04:830,0,11	1/1:19,0:19:27.87:488,28,0	1/1:7,0:7:15.04:180,15,0
chr10	109536643	.	CAA	C	6690.45	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=6.701;DP=982;FS=3.786;HRun=3;HaplotypeScore=287.6835;InbreedingCoeff=0.9298;MQ=51.32;MQ0=14;MQRankSum=-10.076;QD=18.90;ReadPosRankSum=-1.167;VQSLOD=2.0885;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,9:16:9.88:155,10,0	0/0:21,0:21:63.18:0,63,1065	0/0:49,0:12:3.84:0,4,378	0/0:43,0:18:38.19:0,38,790	0/0:1,15:16:0.89:0,1,3	1/1:2,27:29:15.58:313,16,0	1/1:0,30:30:12.35:219,12,0	1/1:19,16:32:88.04:1162,88,0	1/1:2,48:50:40.42:598,40,0	0/0:83,0:83:99:0,242,4247	0/0:22,0:22:66.13:0,66,1121	0/0:54,0:54:99:0,137,1690	0/0:52,0:51:99:0,129,1627	0/0:60,0:59:99:0,139,1858	0/0:66,0:66:99:0,153,2092	0/0:57,1:58:99:0,163,2741	1/1:4,9:13:26.72:348,27,0	1/1:5,7:12:27.09:395,27,0	1/1:3,11:13:37.01:541,37,0	1/1:4,17:20:17.41:377,17,0	1/1:7,31:37:9.87:224,10,0	0/0:47,0:47:99:0,118,1459	0/0:27,0:27:56.10:0,56,659	0/0:29,0:29:65.87:0,66,802	1/1:3,26:29:17.86:246,18,0	1/1:18,23:41:37.79:1400,38,0	1/1:2,17:19:33.38:504,33,0	1/1:0,7:7:15.04:209,15,0
chr10	109536937	.	T	TACACACAC	8602.70	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=5.884;DP=812;FS=22.119;HRun=0;HaplotypeScore=256.3753;InbreedingCoeff=0.7626;MQ=49.82;MQ0=7;MQRankSum=-7.645;QD=13.13;ReadPosRankSum=-2.814;VQSLOD=1.6415;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:38:11.96:239,12,0	0/0:11,0:11:27.05:0,27,575	0/0:22,0:9:2.80:0,3,13	0/0:26,0:13:13.90:0,14,107	1/1:15,0:15:3.01:101,3,0	1/1:28,0:28:6.02:201,6,0	0/1:30,0:29:0:0,0,0	1/1:55,0:50:43.26:504,43,0	1/1:36,0:36:9.03:302,9,0	0/0:38,0:42:75.04:0,75,1456	0/0:20,0:22:48.04:0,48,1034	1/1:16,21:39:18.46:745,18,0	1/1:11,11:26:8.96:372,9,0	1/1:17,21:42:30.10:1115,30,0	1/1:13,20:41:23.97:783,24,0	0/0:32,0:33:69.17:0,69,1498	1/1:19,0:19:27.29:440,27,0	1/1:22,0:20:23.77:460,24,0	1/1:11,0:10:15.05:194,15,0	1/1:20,0:20:6.02:200,6,0	1/1:36,0:37:2.95:23,3,0	1/1:22,8:34:8.80:303,9,0	1/1:16,12:32:5.93:148,6,0	1/1:20,0:20:24.03:384,24,0	1/1:28,0:27:11.98:171,12,0	1/1:51,0:51:49.02:719,49,0	1/1:19,0:18:15.05:499,15,0	1/1:10,0:10:20.63:696,21,0
chr10	109536942	.	A	ACACACACACACACT	11161.41	PASS	AB=0.881;AC=31;AF=0.554;AN=56;BaseQRankSum=6.129;DP=840;FS=24.072;HRun=0;HaplotypeScore=309.6280;InbreedingCoeff=0.1652;MQ=48.88;MQ0=8;MQRankSum=-7.846;QD=17.39;ReadPosRankSum=1.902;VQSLOD=1.6261;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,1:37:1.34:497,1,0	0/0:11,0:11:30.09:0,30,942	0/0:27,0:11:18:0,18,178	0/0:32,0:15:16.90:0,17,363	0/1:7,0:20:5.29:176,0,5	0/1:8,0:28:5.52:373,0,6	0/0:18,0:28:2.83:0,3,24	1/1:54,0:49:81.43:1212,81,0	0/1:5,0:36:12.88:536,0,13	0/0:42,0:42:96.25:0,96,2545	0/0:23,0:23:63.08:0,63,1838	0/1:40,0:40:91.60:313,0,92	0/1:27,0:27:96.74:143,0,97	0/1:41,0:41:98.85:441,0,99	0/1:39,0:39:76.89:315,0,77	0/0:34,0:34:93.20:0,93,2550	1/1:18,1:18:30.28:863,30,0	1/1:18,1:20:29.20:814,29,0	1/1:14,0:13:2.08:329,2,0	1/1:4,14:28:5.84:409,6,0	1/1:38,0:38:7.76:111,8,0	0/1:32,0:32:82.13:119,0,82	0/1:29,0:29:34.67:35,0,116	0/1:21,0:21:9.64:97,0,10	0/1:29,0:29:0.94:367,0,1	1/1:52,0:52:53.14:1711,53,0	1/1:3,14:21:15.05:969,15,0	1/1:3,7:12:22.01:1333,22,0
chr10	109536944	.	A	ACACACACACACACT	7888.78	PASS	AB=0.976;AC=24;AF=0.429;AN=56;BaseQRankSum=9.234;DP=840;FS=11.412;HRun=0;HaplotypeScore=326.2572;InbreedingCoeff=-0.2729;MQ=49.51;MQ0=8;MQRankSum=-7.384;QD=12.60;ReadPosRankSum=4.372;VQSLOD=2.0210;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:40:28.73:294,0,29	0/0:12,0:12:30.08:0,30,940	0/0:29,0:13:24.03:0,24,262	0/0:32,0:15:26.10:0,26,446	0/1:20,0:20:15.02:197,0,15	0/1:28,0:28:32.43:369,0,32	0/1:29,0:28:18.99:174,0,19	0/1:51,0:47:27.58:509,0,28	1/1:34,0:34:8.99:547,9,0	0/0:42,0:42:96.24:0,96,2534	0/0:23,0:23:63.07:0,63,1834	0/1:39,0:39:86.37:315,0,86	0/1:27,0:27:98.73:143,0,99	0/1:42,0:42:99:437,0,116	0/1:40,0:40:99:311,0,104	0/0:34,0:34:90.19:0,90,2517	0/1:19,0:18:0.11:510,0,0	0/1:21,0:20:49.02:416,0,49	0/1:13,0:12:31.42:193,0,31	1/1:26,0:26:5.84:337,6,0	0/0:42,0:42:10.17:0,10,79	0/1:31,0:31:37.27:125,0,37	0/1:30,0:30:37.52:38,0,98	0/1:19,0:19:11.09:95,0,11	0/1:12,11:27:46.62:200,0,47	0/1:51,0:51:83.17:830,0,83	0/1:21,0:20:4.90:766,0,5	1/1:14,0:14:22.01:1082,22,0
chr10	109536954	.	A	ACT	1149.96	PASS	AB=0.979;AC=17;AF=0.304;AN=56;BaseQRankSum=10.691;DP=785;FS=11.587;HRun=0;HaplotypeScore=205.8806;InbreedingCoeff=-0.4141;MQ=57.30;MQ0=5;MQRankSum=-8.279;QD=2.30;ReadPosRankSum=3.367;VQSLOD=1.7369;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:39:99:100,0,132	0/0:11,0:11:33.06:0,33,457	0/0:33,0:19:41.53:0,42,347	0/0:35,0:20:49.76:0,50,549	0/0:14,0:14:9.61:0,10,116	0/1:19,0:19:14.55:15,0,80	0/0:30,0:29:14.98:0,15,125	0/1:46,0:41:99:316,0,149	0/1:20,0:20:8.88:9,0,58	0/0:41,0:41:99:0,111,1367	0/0:24,0:24:47.36:0,47,805	0/1:34,0:34:14.66:15,0,123	0/0:29,0:29:11.19:0,11,215	0/1:40,0:40:45.41:45,0,181	0/1:41,0:41:32.10:32,0,163	0/0:36,0:36:99:0,105,1323	0/1:18,1:18:99:100,0,121	0/1:24,0:22:77.65:78,0,128	0/0:14,0:13:11.90:0,12,241	0/1:19,0:19:19.16:38,0,19	0/1:46,0:46:3.30:3,0,246	0/1:26,0:26:6:6,0,99	0/1:30,0:30:19.24:19,0,152	0/0:17,0:17:19.71:0,20,188	0/1:19,0:18:8.96:9,0,129	0/1:27,19:48:99:322,0,352	0/1:14,0:13:44.22:61,0,44	0/1:16,0:16:48.44:137,0,48
chr10	109537502	.	CGGCATCAATCA	C	20830.33	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=10.486;DP=621;FS=11.986;HRun=0;HaplotypeScore=194.1866;InbreedingCoeff=0.8907;MQ=78.24;MQ0=0;MQRankSum=-13.192;QD=42.08;ReadPosRankSum=3.468;VQSLOD=3.7270;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,22:31:32.85:904,33,0	0/0:9,0:9:27.09:0,27,1268	0/0:25,0:25:72.25:0,72,3457	0/0:16,0:16:41.82:0,42,1765	1/1:3,14:17:7.17:118,7,0	1/1:3,15:18:23.68:781,24,0	1/1:7,22:29:51.17:1539,51,0	1/1:8,16:24:42.13:1015,42,0	1/1:5,28:33:60.21:2048,60,0	0/0:31,0:31:90.30:0,90,4442	0/0:11,0:11:33.11:0,33,1397	1/1:4,22:26:42.14:1415,42,0	1/1:6,28:34:42.06:1468,42,0	1/1:5,27:32:57.20:1943,57,0	1/1:3,22:25:42.14:1350,42,0	0/0:25,0:25:69.24:0,69,3650	1/1:4,11:15:14.39:501,14,0	1/1:2,17:19:30.10:1058,30,0	1/1:3,21:24:54.17:1240,54,0	1/1:4,6:10:6.02:146,6,0	1/1:10,36:46:19.52:425,20,0	0/0:4,5:9:0.47:0,0,1	1/1:5,13:18:9.02:238,9,0	1/1:4,16:20:18.01:570,18,0	1/1:6,15:21:11.60:356,12,0	1/1:7,29:36:84.29:2553,84,0	1/1:2,13:15:27.09:950,27,0	1/1:0,2:2:6.02:212,6,0
chr10	109539928	.	AAAC	A	9457.24	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=10.294;DP=406;FS=0.000;HRun=0;HaplotypeScore=77.3595;InbreedingCoeff=0.9493;MQ=79.02;MQ0=0;MQRankSum=-3.845;QD=31.52;ReadPosRankSum=4.857;VQSLOD=4.5304;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:36.08:509,36,0	0/0:4,0:4:9.03:0,9,189	0/0:29,0:27:44.98:0,45,962	0/0:20,0:20:35.20:0,35,688	1/1:4,15:19:39.13:567,39,0	1/1:1,4:5:9.03:135,9,0	1/1:3,8:11:21.07:310,21,0	1/1:4,9:13:30.10:444,30,0	1/1:1,6:7:18.06:265,18,0	0/0:24,0:24:60.19:0,60,1146	0/0:13,0:13:39.13:0,39,791	1/1:0,13:13:30.10:448,30,0	1/1:2,12:14:27.09:399,27,0	1/1:0,15:15:33.11:489,33,0	1/1:0,21:21:48.16:699,48,0	0/0:16,0:16:45.15:0,45,892	1/1:2,21:23:45.15:672,45,0	1/1:4,18:22:42.14:628,42,0	1/1:3,7:9:18.04:239,18,0	1/1:1,11:12:24.04:334,24,0	1/1:2,14:16:29.08:446,29,0	1/1:0,8:8:21.07:314,21,0	1/1:0,13:13:26.89:403,27,0	1/1:0,18:18:45.15:673,45,0	1/1:2,13:15:39.13:564,39,0	1/1:2,12:14:36.11:518,36,0	1/1:0,10:10:24:310,24,0	1/1:0,2:2:6.02:90,6,0
chr10	109541015	.	C	CT	4891.41	PASS	AB=0.625;AC=25;AF=0.568;AN=44;BaseQRankSum=6.182;DP=345;FS=1.357;HRun=1;HaplotypeScore=98.3490;InbreedingCoeff=0.1489;MQ=36.04;MQ0=74;MQRankSum=-0.555;QD=19.72;ReadPosRankSum=4.677;VQSLOD=5.2554;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:3.01:45,3,0	0/0:4,0:3:6.02:0,6,84	0/0:17,0:1:3.01:0,3,42	0/0:22,0:4:12.02:0,12,142	./.	./.	1/1:2,10:9:24.08:359,24,0	1/1:0,1:1:3.01:45,3,0	1/1:0,16:17:45.15:671,45,0	./.	0/0:3,0:2:3.01:0,3,42	0/1:17,19:24:49.50:413,0,50	0/1:6,8:11:62.77:194,0,63	1/1:11,24:28:5.79:625,6,0	0/1:9,18:22:53.74:331,0,54	0/0:24,0:21:48.16:0,48,671	0/1:4,17:21:99:615,0,101	0/1:2,11:13:8.82:419,0,9	./.	./.	1/1:4,6:5:6.02:85,6,0	0/1:3,2:2:0:0,0,0	./.	0/1:21,19:32:99:639,0,298	1/1:0,4:3:3.01:45,3,0	0/0:3,0:1:3.01:0,3,39	1/1:0,10:10:24.08:362,24,0	1/1:0,1:1:3.01:45,3,0
chr10	109541149	.	C	CT	882.57	PASS	AB=0.767;AC=15;AF=0.417;AN=36;BaseQRankSum=6.569;DP=420;FS=0.878;HRun=1;HaplotypeScore=46.7370;InbreedingCoeff=0.2952;MQ=27.12;MQ0=151;MQRankSum=-3.300;QD=8.49;ReadPosRankSum=-0.145;VQSLOD=0.7919;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:4,3:4:36.54:39,0,37	0/0:12,0:5:12.04:0,12,166	./.	./.	./.	./.	1/1:9,2:5:6.02:88,6,0	0/1:6,3:6:71.87:78,0,72	1/1:8,6:11:14.84:217,15,0	0/0:23,0:1:3.01:0,3,42	./.	0/0:24,0:18:39.03:0,39,523	0/0:20,0:13:21.06:0,21,275	0/0:37,0:31:36.80:0,37,505	0/0:22,0:16:34.26:0,34,403	0/0:24,0:17:28.34:0,28,378	0/1:9,3:6:32.85:81,0,33	1/1:5,4:7:9.03:135,9,0	0/1:4,2:5:74.28:74,0,111	./.	1/1:11,12:15:2.64:45,3,0	./.	./.	0/0:36,0:27:45.83:0,46,572	./.	0/1:4,1:3:38.52:39,0,75	1/1:3,5:8:15.05:228,15,0	./.
chr10	109541482	.	A	ACC	842.43	PASS	AB=0.980;AC=20;AF=0.357;AN=56;BaseQRankSum=1.479;DP=649;FS=57.348;HRun=0;HaplotypeScore=68.1511;InbreedingCoeff=-0.2788;MQ=36.90;MQ0=174;MQRankSum=3.456;QD=2.01;ReadPosRankSum=1.350;VQSLOD=-0.5283;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:26:51.06:106,0,51	0/0:6,0:3:3.01:0,3,38	0/0:45,0:8:11.07:0,11,89	0/0:69,0:11:18.62:0,19,219	0/1:14,0:7:36.49:36,0,56	0/1:19,0:13:10.58:28,0,11	0/1:21,1:13:6.79:37,0,7	1/1:26,0:17:7.22:133,7,0	0/0:16,0:11:2.08:0,2,94	0/0:24,0:17:43.95:0,44,537	0/0:9,0:8:22.58:0,23,243	0/1:15,1:11:35.81:36,0,78	0/0:11,0:11:7.74:0,8,93	0/1:19,0:14:0.56:1,0,98	0/1:24,2:23:99:137,0,257	0/0:18,0:9:21.04:0,21,249	0/1:29,0:18:36.02:118,0,36	0/1:38,0:22:21.74:22,0,117	0/1:18,0:7:56.03:56,0,60	1/1:8,1:6:8.04:57,8,0	0/1:13,0:5:34.61:35,0,51	0/1:9,0:8:2.94:3,0,68	0/0:13,0:8:5.65:0,6,26	0/1:20,1:7:12.21:19,0,12	0/0:17,1:10:1.85:0,2,14	0/1:17,0:11:37.88:62,0,38	0/1:16,0:12:32.26:86,0,32	0/1:65,1:8:26.75:27,0,78
chr10	109541483	.	A	ACC	1822.19	PASS	AB=0.901;AC=23;AF=0.411;AN=56;BaseQRankSum=-3.238;DP=629;FS=47.619;HRun=0;HaplotypeScore=62.7999;InbreedingCoeff=-0.0322;MQ=38.01;MQ0=165;MQRankSum=3.985;QD=4.50;ReadPosRankSum=2.504;VQSLOD=0.4189;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,12:23:55.69:149,0,56	0/0:6,0:3:3.01:0,3,39	0/0:43,0:8:13.47:0,13,104	0/0:67,0:11:18.65:0,19,216	0/1:13,0:6:30.19:88,0,30	1/1:7,9:14:7.14:93,7,0	1/1:11,9:12:17.17:193,17,0	0/1:25,1:17:4.02:285,0,4	0/1:9,4:10:21.16:21,0,74	0/0:25,0:18:44.35:0,44,531	0/0:8,0:8:22.24:0,22,240	0/0:17,0:12:3.80:0,4,150	0/0:11,0:11:24.07:0,24,163	0/0:19,0:14:21.63:0,22,158	0/1:25,1:23:63.87:64,0,246	0/0:18,0:9:21.01:0,21,240	0/1:31,1:20:2.11:382,0,2	0/1:26,12:22:46.88:47,0,88	0/1:14,4:8:62.86:118,0,63	1/1:8,0:5:8.65:83,9,0	0/1:14,0:6:8.99:9,0,33	0/1:9,0:8:7:7,0,47	0/0:10,0:6:5.38:0,5,40	0/1:21,0:7:13.74:14,0,35	1/1:11,6:9:1.16:3,1,0	0/1:11,4:9:27.37:139,0,27	1/1:15,0:11:2.19:226,2,0	0/1:62,0:7:66.81:67,0,91
chr10	109541603	.	A	AAG	13592.64	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=3.118;DP=673;FS=0.336;HRun=0;HaplotypeScore=86.5713;InbreedingCoeff=0.9890;MQ=66.08;MQ0=16;MQRankSum=-1.743;QD=36.84;ReadPosRankSum=4.276;VQSLOD=7.1748;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,41:44:74.14:1429,74,0	0/0:4,0:4:12.04:0,12,172	0/0:69,0:26:39.24:0,39,549	0/0:61,0:15:20.01:0,20,280	1/1:1,26:26:69:1068,69,0	1/1:0,19:19:39.13:659,39,0	1/1:0,21:21:42.14:710,42,0	1/1:2,22:24:66.13:1055,66,0	1/1:1,23:23:54.18:911,54,0	0/0:20,0:20:57.15:0,57,727	0/0:14,0:14:39.12:0,39,546	0/0:10,0:9:27.07:0,27,370	0/0:19,0:19:57.09:0,57,740	0/0:13,0:13:33.08:0,33,451	0/0:21,0:21:57.18:0,57,804	0/0:10,0:10:24.07:0,24,331	1/1:6,30:35:56.75:1149,57,0	1/1:7,24:25:14.97:869,15,0	1/1:0,20:20:60.18:966,60,0	1/1:1,19:21:50.91:825,51,0	1/1:1,13:14:13.58:441,14,0	0/0:16,0:16:45.14:0,45,633	0/0:24,0:24:68.83:0,69,847	0/0:23,0:21:60.10:0,60,834	1/1:0,20:20:45.15:762,45,0	1/1:2,23:26:34.74:1124,35,0	1/1:0,29:29:72.25:1218,72,0	1/1:0,10:10:24.08:406,24,0
chr10	109542938	.	G	GA	14006.76	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=18.415;DP=748;FS=10.192;HRun=0;HaplotypeScore=101.0081;InbreedingCoeff=0.9986;MQ=94.01;MQ0=1;MQRankSum=-2.805;QD=35.55;ReadPosRankSum=1.859;VQSLOD=3.7910;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:44:99:1693,126,0	0/0:10,0:10:30.10:0,30,420	0/0:37,0:37:99:0,106,1299	0/0:30,0:29:63.47:0,63,901	1/1:0,19:19:57.19:771,57,0	1/1:1,12:13:36.12:489,36,0	1/1:1,30:31:75.25:1025,75,0	1/1:4,24:28:75.60:1021,76,0	1/1:3,29:32:89.84:1219,90,0	0/0:35,0:35:99:0,105,1452	0/0:14,0:14:42.14:0,42,578	0/0:34,0:34:99:0,102,1407	0/0:28,0:28:84.28:0,84,1172	0/0:28,0:28:84.28:0,84,1170	0/0:41,0:41:99:0,123,1700	0/0:23,0:23:69.22:0,69,947	1/1:1,38:39:99:1398,102,0	1/1:1,26:27:49.19:850,49,0	1/1:3,20:23:37.17:783,37,0	1/1:2,12:14:34.65:488,35,0	1/1:1,46:47:99:1633,120,0	0/0:19,0:19:57.17:0,57,761	0/0:14,0:14:42.14:0,42,584	0/0:41,0:41:99:0,120,1658	1/1:1,14:15:36.12:485,36,0	1/1:2,25:27:32.87:928,33,0	1/1:1,27:28:71.89:996,72,0	1/1:2,5:7:17.64:226,18,0
chr10	109544117	.	AAGACAGACAGACAGAC	A	4729.06	PASS	AB=1.000;AC=18;AF=0.346;AN=52;BaseQRankSum=8.865;DP=753;FS=3.770;HRun=0;HaplotypeScore=321.4629;InbreedingCoeff=0.5720;MQ=63.81;MQ0=4;MQRankSum=-9.254;QD=17.39;ReadPosRankSum=-0.581;VQSLOD=2.5319;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:81.28:0,81,5034	0/0:13,0:13:21.07:0,21,1573	./.	./.	0/1:23,0:23:23.48:23,0,84	0/1:22,0:22:14.50:106,0,14	0/0:23,0:23:7.56:0,8,33	0/0:40,0:39:18:0,18,282	0/1:21,0:21:99:179,0,272	0/0:38,0:37:42.62:0,43,2943	0/0:22,0:22:30.10:0,30,1798	1/1:17,10:27:18.06:769,18,0	1/1:7,6:13:5.94:261,6,0	1/1:19,12:31:21.07:912,21,0	1/1:22,21:43:24.08:1029,24,0	0/0:32,0:33:57.16:0,57,3477	0/0:8,0:22:39.13:0,39,1622	0/0:28,0:29:42.14:0,42,2736	0/0:18,0:18:15.05:0,15,1053	0/0:23,0:23:45.15:0,45,2936	0/0:56,0:57:88.85:0,89,5424	1/1:9,14:23:24.51:932,25,0	1/1:12,9:20:2.61:129,3,0	1/1:16,9:25:5.89:247,6,0	0/1:23,0:23:37.75:141,0,38	0/0:35,0:34:60.20:0,60,3241	0/0:23,0:23:45.15:0,45,3293	0/0:14,0:14:24.08:0,24,1684
chr10	109544131	.	GACA	G	316	PASS	AB=0.927;AC=9;AF=0.161;AN=56;BaseQRankSum=12.892;DP=716;FS=1.564;HRun=0;HaplotypeScore=150.1856;InbreedingCoeff=-0.2089;MQ=56.39;MQ0=11;MQRankSum=-8.402;QD=1.53;ReadPosRankSum=3.710;VQSLOD=2.6459;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:99:0,125,2383	0/0:11,0:11:33.11:0,33,697	0/0:10,0:5:15.05:0,15,195	0/0:21,0:17:34.71:0,35,568	0/0:24,4:28:41.74:0,42,556	0/1:16,4:20:71.07:71,0,224	0/0:23,0:23:15.81:0,16,335	0/0:41,0:35:99:0,105,1363	0/1:16,8:24:48.13:48,0,444	0/0:38,0:37:99:0,105,1857	0/0:24,0:24:69.70:0,70,1141	0/1:22,0:22:37.12:37,0,315	0/1:9,0:9:20.23:20,0,66	0/1:27,0:27:55.76:56,0,411	0/1:39,0:39:63.40:63,0,337	0/0:41,0:41:99:0,116,2102	0/1:25,0:25:18.74:19,0,287	0/0:23,0:23:58.88:0,59,1196	0/0:18,0:18:54.18:0,54,874	0/0:25,0:25:72.23:0,72,1362	0/0:56,0:55:99:0,150,2746	0/1:22,0:22:73.47:73,0,195	0/0:17,0:15:7.78:0,8,256	0/0:22,0:22:0.06:0,0,161	0/1:13,6:19:67.28:67,0,145	0/0:31,0:30:90.29:0,90,1601	0/0:24,0:24:69.23:0,69,1407	0/0:10,0:10:27.09:0,27,596
chr10	109544135	.	GACAGACAGA	G	2382.45	PASS	AB=0.934;AC=12;AF=0.214;AN=56;BaseQRankSum=13.354;DP=714;FS=3.573;HRun=0;HaplotypeScore=218.2422;InbreedingCoeff=-0.2745;MQ=55.89;MQ0=12;MQRankSum=-9.362;QD=8.86;ReadPosRankSum=4.414;VQSLOD=2.2680;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:99:0,141,4405	0/0:10,0:10:30.10:0,30,1233	0/0:8,0:4:12.04:0,12,168	0/0:20,0:15:41.97:0,42,597	0/1:24,4:28:99:112,0,296	0/1:16,4:20:99:194,0,263	0/1:23,0:23:99:115,0,217	0/0:40,0:34:99:0,102,1545	0/1:16,8:24:99:320,0,428	0/0:36,0:35:99:0,101,2975	0/0:24,0:24:69.71:0,70,1856	0/1:20,0:20:99:278,0,304	0/1:10,0:10:95.93:96,0,121	0/1:28,0:28:99:328,0,489	0/1:41,0:41:99:367,0,526	0/0:41,0:41:99:0,123,3639	0/0:24,0:25:60.20:0,60,1023	0/0:23,0:23:69.23:0,69,2226	0/0:18,0:18:54.18:0,54,1322	0/0:25,0:25:72.25:0,72,2474	0/0:56,0:55:99:0,159,4937	0/1:21,0:21:99:352,0,191	0/1:15,0:13:36.94:37,0,211	0/1:21,0:21:78.92:79,0,166	0/1:12,6:18:99:255,0,191	0/0:32,0:31:93.32:0,93,2882	0/0:26,0:26:72.25:0,72,2767	0/0:10,0:10:27.09:0,27,1198
chr10	109544576	.	AT	A	11195.92	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.261;DP=855;FS=4.692;HRun=2;HaplotypeScore=83.4294;InbreedingCoeff=1.0000;MQ=84.60;MQ0=0;MQRankSum=-3.291;QD=36.23;ReadPosRankSum=0.671;VQSLOD=5.3107;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:99:1363,105,0	0/0:14,0:14:39.13:0,39,578	0/0:28,0:28:81.23:0,81,1133	0/0:32,0:31:78.19:0,78,1051	0/0:29,0:29:84.28:0,84,1258	0/0:31,0:31:93.30:0,93,1372	0/0:37,0:37:99:0,111,1644	1/1:0,38:38:99:1480,114,0	0/0:41,0:41:99:0,123,1823	0/0:29,0:29:87.29:0,87,1276	0/0:25,0:25:72.22:0,72,1040	0/0:49,0:49:99:0,147,2201	0/0:28,0:28:84.28:0,84,1259	0/0:32,0:32:93.31:0,93,1384	0/0:39,0:39:99:0,117,1716	0/0:31,0:31:93.32:0,93,1394	1/1:2,32:34:87.28:1128,87,0	1/1:1,24:25:72.23:935,72,0	1/1:0,30:30:90.29:1169,90,0	1/1:1,24:25:66.21:857,66,0	1/1:2,34:36:93.30:1208,93,0	0/0:22,0:22:63.21:0,63,944	0/0:21,0:21:60.20:0,60,899	0/0:29,0:29:87.29:0,87,1304	0/0:29,0:29:87.29:0,87,1303	1/1:1,34:35:57.34:1225,57,0	1/1:0,38:38:99:1363,105,0	1/1:0,12:12:36.12:467,36,0
chr10	109546942	.	C	CA	1403.41	PASS	AB=0.816;AC=20;AF=0.357;AN=56;BaseQRankSum=2.781;DP=285;FS=0.679;HRun=0;HaplotypeScore=41.7644;InbreedingCoeff=0.5355;MQ=51.58;MQ0=9;MQRankSum=-2.580;QD=14.32;ReadPosRankSum=-0.190;VQSLOD=4.2025;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,7:9:20.36:224,20,0	0/0:4,0:4:9.01:0,9,99	0/0:19,0:5:2.94:0,3,25	0/1:17,0:10:4.27:4,0,20	0/0:15,0:15:29.87:0,30,326	0/0:11,0:10:0.52:0,1,115	0/0:16,0:16:26.86:0,27,279	1/1:1,4:5:12.04:169,12,0	0/1:4,0:4:6.74:7,0,24	0/0:12,0:11:21.06:0,21,238	0/0:14,0:15:23.38:0,23,246	0/0:5,0:4:6.02:0,6,67	0/0:12,0:12:17.49:0,17,180	0/0:10,0:10:12.03:0,12,133	0/0:13,0:13:24.07:0,24,302	0/0:11,0:11:17.95:0,18,207	0/1:5,9:14:13.12:266,0,13	1/1:0,13:9:12.04:166,12,0	1/1:4,2:4:6.02:95,6,0	1/1:3,4:8:18.06:274,18,0	1/1:0,2:2:3.01:36,3,0	0/0:5,0:5:14.83:0,15,145	0/0:10,0:9:18.05:0,18,210	0/0:16,0:14:8.99:0,9,98	0/0:13,0:13:5.21:0,5,144	1/1:1,6:4:9.03:134,9,0	1/1:2,3:4:9.03:127,9,0	0/1:2,3:4:28.61:86,0,29
chr10	109546989	.	AT	A	4063.53	PASS	AB=0.519;AC=19;AF=0.339;AN=56;BaseQRankSum=7.557;DP=326;FS=13.275;HRun=1;HaplotypeScore=50.2714;InbreedingCoeff=0.8728;MQ=64.81;MQ0=3;MQRankSum=-3.883;QD=32.51;ReadPosRankSum=-0.143;VQSLOD=1.8025;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:36.12:503,36,0	0/0:7,0:7:15.05:0,15,239	0/0:12,0:8:12.23:0,12,168	0/0:19,0:11:11.90:0,12,147	0/0:14,0:14:39.11:0,39,597	0/0:9,0:8:24.08:0,24,383	0/0:20,0:20:36.12:0,36,575	1/1:0,20:16:48.16:670,48,0	0/0:6,0:6:15.05:0,15,239	0/0:18,0:18:54.18:0,54,863	0/0:14,0:14:42.14:0,42,671	0/0:10,0:10:21.07:0,21,333	0/0:11,0:11:30.02:0,30,423	0/0:12,0:11:21.07:0,21,333	0/0:9,0:8:12.04:0,12,192	0/0:9,0:9:24.08:0,24,383	1/1:1,13:14:27.09:377,27,0	1/1:0,6:4:9.03:125,9,0	1/1:0,9:9:27.05:334,27,0	1/1:0,9:9:21.07:293,21,0	1/1:1,11:12:30.10:419,30,0	0/0:3,0:3:9.03:0,9,141	0/0:5,0:5:5.93:0,6,96	0/0:15,0:15:24.06:0,24,359	0/0:7,0:7:15.05:0,15,240	0/1:1,13:14:8.84:464,0,9	1/1:0,10:9:27.09:377,27,0	1/1:0,13:13:36.12:502,36,0
chr10	109547150	.	C	CT	2560.03	PASS	AB=0.843;AC=28;AF=0.500;AN=56;BaseQRankSum=0.890;DP=444;FS=29.220;HRun=2;HaplotypeScore=65.4046;InbreedingCoeff=0.8238;MQ=60.83;MQ0=8;MQRankSum=-1.628;QD=10.32;ReadPosRankSum=1.589;VQSLOD=0.0091;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:32:43.95:249,44,0	0/0:7,0:6:17.92:0,18,165	0/0:12,0:8:7.87:0,8,48	0/0:18,0:7:11.03:0,11,85	1/1:18,3:20:25.79:235,26,0	1/1:12,0:12:7.84:77,8,0	1/1:13,1:14:27.54:167,28,0	1/1:22,0:21:49.46:383,49,0	1/1:14,0:13:25.23:144,25,0	0/0:23,0:22:52.16:0,52,515	0/0:26,0:26:65.20:0,65,629	0/0:12,0:12:33.03:0,33,348	0/0:15,0:15:17.26:0,17,372	0/0:10,0:11:29.94:0,30,271	0/0:20,0:20:53.94:0,54,556	0/0:17,0:17:26.70:0,27,332	1/1:10,1:11:23.84:171,24,0	1/1:19,2:20:40.92:267,41,0	1/1:11,2:12:25.45:184,25,0	1/1:12,0:9:3.58:56,4,0	1/1:5,0:5:4.67:31,5,0	0/0:11,0:11:25.86:0,26,267	0/0:17,0:16:35.76:0,36,295	0/0:7,0:7:11.38:0,11,105	0/1:16,2:16:0.46:156,0,0	1/1:23,1:22:25.06:279,25,0	1/1:17,0:16:37.28:225,37,0	0/1:8,3:9:9.54:151,0,10
chr10	109547427	.	TAGACAGACAGAC	T	3775.12	PASS	AB=0.974;AC=11;AF=0.196;AN=56;BaseQRankSum=1.972;DP=784;FS=4.874;HRun=0;HaplotypeScore=355.7799;InbreedingCoeff=0.8559;MQ=52.79;MQ0=11;MQRankSum=-7.293;QD=24.67;ReadPosRankSum=1.285;VQSLOD=1.4028;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:46.90:0,47,1548	0/0:12,0:11:33.11:0,33,1574	0/0:39,0:19:19.62:0,20,484	0/0:33,0:22:16.30:0,16,432	1/1:15,18:31:9.03:169,9,0	1/1:5,13:18:33.11:1148,33,0	1/1:15,6:21:16.29:442,16,0	0/0:38,0:36:63.21:0,63,2017	1/1:14,15:29:48.16:1538,48,0	0/0:35,0:35:84.28:0,84,3973	0/0:23,0:23:54.19:0,54,2768	0/0:40,0:40:68.77:0,69,2667	0/0:27,0:27:61.71:0,62,2596	0/0:40,0:40:63.13:0,63,2610	0/0:43,0:43:57.19:0,57,2512	0/1:37,1:38:13.11:13,0,3838	0/0:21,0:21:12.88:0,13,444	0/0:16,0:16:29.98:0,30,666	0/0:23,0:22:42.08:0,42,1286	0/0:36,0:29:23.62:0,24,640	0/0:21,0:21:15.03:0,15,679	0/0:21,0:21:42.14:0,42,1953	0/0:26,0:25:33.07:0,33,1037	0/0:31,0:31:35.10:0,35,1560	1/1:6,8:13:15.05:465,15,0	0/0:32,0:31:60.20:0,60,2057	0/0:32,0:32:67.03:0,67,2001	0/0:7,0:6:15.05:0,15,633
chr10	109547456	.	AGAATGAATGAATGAATGAAT	A	3191.52	PASS	AB=0.954;AC=20;AF=0.357;AN=56;BaseQRankSum=7.035;DP=750;FS=24.621;HRun=0;HaplotypeScore=433.4056;InbreedingCoeff=-0.1326;MQ=42.90;MQ0=24;MQRankSum=-0.285;QD=7.01;ReadPosRankSum=5.035;VQSLOD=0.6694;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:5.09:0,5,402	0/0:18,0:17:42.13:0,42,3116	0/0:36,0:7:8.75:0,9,194	0/0:27,0:5:8.81:0,9,305	0/1:34,0:33:31.85:32,0,436	0/1:22,0:22:64.45:64,0,274	0/1:17,0:17:55.74:216,0,56	0/0:34,0:32:56.95:0,57,626	0/1:31,0:31:99:241,0,337	0/0:40,0:40:96.31:0,96,7489	0/0:27,0:26:57.17:0,57,4121	1/1:23,6:29:1.04:283,1,0	1/1:22,2:24:33.28:753,33,0	0/1:28,8:36:4.62:172,0,5	1/1:30,4:34:2.62:175,3,0	0/1:34,0:34:29.70:30,0,4805	0/1:14,0:14:52.02:52,0,176	0/1:12,0:12:99:189,0,188	0/1:26,0:20:44.75:45,0,310	0/0:34,0:24:39.69:0,40,422	0/0:19,0:19:12.52:0,13,94	0/1:18,9:27:6.71:115,0,7	0/0:15,7:21:0.93:0,1,2	0/1:20,7:27:0.83:1,0,11	0/1:17,0:16:79.03:79,0,263	0/1:35,0:34:99:364,0,534	0/1:36,0:36:99:540,0,716	0/0:10,0:9:21.07:0,21,380
chr10	109547458	.	A	AC	696.80	PASS	AB=0.952;AC=19;AF=0.339;AN=56;BaseQRankSum=2.801;DP=718;FS=0.919;HRun=0;HaplotypeScore=235.9273;InbreedingCoeff=0.6002;MQ=43.77;MQ0=24;MQRankSum=6.346;QD=2.28;ReadPosRankSum=-0.496;VQSLOD=2.6288;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:27.11:27,0,44	0/0:18,0:17:51.13:0,51,691	0/0:36,0:8:17.43:0,17,198	0/0:28,0:4:12.01:0,12,138	0/0:34,0:33:5.49:0,5,29	0/0:22,0:22:32.07:0,32,214	0/0:19,0:19:18.56:0,19,91	0/0:31,0:29:66.68:0,67,874	0/0:32,0:32:40.02:0,40,266	0/0:39,0:39:99:0,114,1569	0/0:28,0:27:78.25:0,78,1076	1/1:24,5:29:26.08:113,26,0	1/1:18,6:24:37.39:142,37,0	1/1:26,9:35:7.34:93,7,0	1/1:20,13:33:25.54:108,26,0	0/0:34,0:34:98.92:0,99,1353	0/0:13,0:13:7.43:0,7,20	0/0:10,0:10:13.23:0,13,148	0/0:17,0:12:21.69:0,22,260	0/1:27,0:19:3.35:27,0,3	0/1:16,0:16:10.58:118,0,11	1/1:24,3:27:25.86:118,26,0	0/1:15,7:21:0.11:29,0,0	1/1:20,5:25:12.44:84,12,0	0/0:17,0:16:11.53:0,12,73	0/0:35,0:34:19.18:0,19,269	0/1:30,0:30:14.11:14,0,42	1/1:9,0:8:4.54:15,5,0
chr10	109547459	.	ATGAATGAATGAATGAAT	A	4147.02	PASS	AB=0.978;AC=23;AF=0.411;AN=56;BaseQRankSum=3.953;DP=717;FS=9.414;HRun=0;HaplotypeScore=378.7511;InbreedingCoeff=0.1583;MQ=43.79;MQ0=23;MQRankSum=2.596;QD=9.85;ReadPosRankSum=6.506;VQSLOD=0.6825;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:39.81:0,40,412	0/0:19,0:18:54.18:0,54,3364	0/0:36,0:9:24.08:0,24,758	0/0:27,0:4:12.04:0,12,389	0/1:35,0:34:20.30:20,0,345	0/1:22,0:22:41.58:42,0,384	0/1:19,0:19:99:179,0,114	0/0:32,0:30:85.59:0,86,1260	0/1:33,0:33:99:183,0,466	0/0:39,0:39:99:0,114,7477	0/0:29,0:28:81.28:0,81,4626	1/1:24,5:29:30.80:492,31,0	1/1:17,6:23:48.53:873,49,0	1/1:26,9:35:11.81:391,12,0	1/1:19,13:32:27.01:394,27,0	0/0:34,0:34:8.97:0,9,4896	0/1:13,0:13:34.05:34,0,192	0/1:10,0:10:99:199,0,209	0/1:17,0:12:32.87:33,0,450	0/0:27,0:19:44.68:0,45,376	0/0:15,0:15:14.78:0,15,128	1/1:23,3:26:11.37:270,11,0	0/1:15,7:21:13.59:35,0,14	1/1:19,5:24:8.91:45,9,0	0/1:17,0:16:59.07:59,0,224	0/1:35,0:34:99:367,0,607	0/1:29,0:29:99:532,0,447	0/0:9,0:8:22.09:0,22,236
chr10	109547483	.	ATGAATGAATGAATGAT	A	9618.09	PASS	AB=0.900;AC=32;AF=0.571;AN=56;BaseQRankSum=8.074;DP=755;FS=7.221;HRun=0;HaplotypeScore=354.6390;InbreedingCoeff=0.2666;MQ=47.83;MQ0=22;MQRankSum=-2.554;QD=17.02;ReadPosRankSum=5.685;VQSLOD=1.4606;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,20:29:42:193,0,42	0/0:16,0:15:42.14:0,42,2764	0/0:29,0:11:21.92:0,22,585	0/0:23,0:6:15.02:0,15,278	1/1:8,33:40:86.65:684,87,0	1/1:8,22:30:38.32:353,38,0	1/1:2,24:26:10.06:418,10,0	1/1:2,38:40:99:975,114,0	1/1:10,27:37:50.21:658,50,0	0/0:47,0:47:99:0,132,6979	0/0:27,0:26:69.08:0,69,3626	0/1:30,0:30:99:237,0,311	0/1:26,0:26:99:474,0,165	0/1:30,0:30:99:142,0,306	0/1:32,0:32:99:113,0,390	0/1:35,1:36:34.74:35,0,4250	1/1:12,1:13:28.03:315,28,0	1/1:9,3:12:26.80:611,27,0	0/1:10,1:9:40.98:281,0,41	1/1:18,6:19:33.28:302,33,0	1/1:11,0:11:19.72:152,20,0	0/1:25,0:25:45.18:45,0,246	0/0:24,0:23:53.26:0,53,357	0/0:24,0:24:41.25:0,41,269	1/1:3,15:17:26.65:286,27,0	1/1:9,36:44:50.96:1570,51,0	0/1:24,12:36:10.40:1601,0,10	0/1:9,4:12:25.47:174,0,25
chr10	109547495	.	ATGAT	A	5905.43	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=8.487;DP=739;FS=9.184;HRun=0;HaplotypeScore=218.2234;InbreedingCoeff=0.9814;MQ=55.29;MQ0=12;MQRankSum=-3.893;QD=15.71;ReadPosRankSum=2.767;VQSLOD=3.5589;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:26.99:167,27,0	0/0:15,0:14:42.11:0,42,887	0/0:30,0:16:37.74:0,38,471	0/0:22,0:9:26.96:0,27,252	1/1:38,0:38:88.28:571,88,0	1/1:28,0:28:20.78:159,21,0	1/1:24,0:24:9.03:107,9,0	1/1:38,0:38:83.84:692,84,0	1/1:32,0:32:35.56:286,36,0	0/0:49,0:49:99:0,136,2379	0/0:26,0:26:75.05:0,75,1256	0/0:25,0:25:22.85:0,23,367	0/0:20,0:20:8.60:0,9,232	0/0:29,0:29:72.90:0,73,487	0/0:36,0:36:97.15:0,97,705	0/0:35,0:35:25.36:0,25,1417	1/1:19,0:19:53.47:398,53,0	1/1:14,1:15:36.23:317,36,0	1/1:15,0:13:33.01:313,33,0	1/1:24,1:21:57.37:421,57,0	1/1:12,0:12:32.13:219,32,0	0/0:25,0:25:64.44:0,64,434	0/0:26,0:25:65.01:0,65,462	0/0:25,0:25:53.32:0,53,372	1/1:17,0:16:23.73:177,24,0	1/1:38,0:38:89.56:828,90,0	1/1:35,2:37:99:964,102,0	1/1:11,1:12:32.86:285,33,0
chr10	109549331	.	GCACA	G	345.65	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=0.486;DP=931;FS=18.267;HRun=0;HaplotypeScore=157.5171;InbreedingCoeff=0.4020;MQ=53.06;MQ0=47;MQRankSum=3.988;QD=7.68;ReadPosRankSum=-3.582;VQSLOD=0.7798;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:37:75.26:0,75,1921	0/0:21,0:21:60.21:0,60,1539	0/0:42,0:1:0:0,0,0	0/0:31,0:2:3.01:0,3,78	1/1:2,8:10:15.05:267,15,0	0/0:12,0:12:3.33:0,3,222	0/1:16,0:14:68.62:69,0,177	0/0:35,0:30:81.28:0,81,2053	0/0:27,0:26:38.94:0,39,612	0/0:55,0:55:99:0,157,3956	0/0:29,0:29:66.23:0,66,1693	0/0:53,0:53:99:0,138,3540	0/0:51,0:52:99:0,135,3383	0/0:59,0:59:99:0,157,3938	0/0:57,0:57:99:0,160,4003	0/0:33,0:33:84.29:0,84,2166	0/0:28,0:23:51.15:0,51,1153	0/0:19,0:19:48.13:0,48,1118	0/0:21,0:15:39.13:0,39,987	0/0:21,0:19:48.16:0,48,1233	0/0:81,0:71:99:0,169,4068	0/0:33,0:33:96.33:0,96,2439	0/0:22,0:22:60.18:0,60,1484	0/0:44,0:44:99:0,120,3023	0/1:19,0:19:99:121,0,311	0/0:35,0:31:81.28:0,81,2047	0/0:26,0:25:51.18:0,51,1296	0/0:6,0:6:18.06:0,18,378
chr10	109549387	.	ACATG	A	88.52	PASS	AB=0.823;AC=4;AF=0.071;AN=56;BaseQRankSum=4.576;DP=991;FS=21.832;HRun=0;HaplotypeScore=157.4412;InbreedingCoeff=-0.0781;MQ=54.78;MQ0=35;MQRankSum=1.370;QD=0.83;ReadPosRankSum=-4.378;VQSLOD=-0.2797;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,5:48:49.90:0,50,2593	0/0:20,0:20:60.21:0,60,1515	0/0:32,0:6:12.04:0,12,309	0/0:30,0:6:10.52:0,11,380	0/0:13,0:13:30.10:0,30,789	0/0:7,0:7:21.07:0,21,555	0/0:27,0:24:72.25:0,72,1899	0/0:34,0:32:69.19:0,69,1730	0/0:18,0:18:54.19:0,54,1425	0/0:56,0:56:99:0,163,4055	0/0:18,0:18:42.14:0,42,1100	0/0:52,0:52:99:0,156,3838	0/0:53,0:53:99:0,154,3926	0/0:68,0:68:99:0,190,4876	0/0:64,0:64:99:0,181,4456	0/0:46,0:46:99:0,129,3258	0/1:22,10:28:10.05:10,0,1063	0/0:15,0:14:36.12:0,36,950	0/0:22,0:17:48.16:0,48,1183	0/0:28,0:25:75.26:0,75,1980	0/0:81,9:81:99:0,162,4274	0/0:45,0:45:99:0,129,3280	0/0:27,0:27:78.27:0,78,2022	0/0:49,0:48:99:0,132,3386	0/0:13,0:13:36.12:0,36,951	0/1:35,1:31:60.75:61,0,1939	0/1:29,4:32:29.13:29,0,1855	0/1:3,3:6:95.35:95,0,223
chr10	109551082	.	T	TGCC	2720.98	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-6.675;DP=589;FS=11.252;HRun=0;HaplotypeScore=107.6464;InbreedingCoeff=0.8649;MQ=69.06;MQ0=0;MQRankSum=-0.753;QD=27.77;ReadPosRankSum=2.374;VQSLOD=3.6044;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:56.95:0,57,601	0/0:12,0:12:24:0,24,283	0/1:5,0:5:0.84:1,0,18	0/0:13,0:13:28.63:0,29,322	1/1:4,5:10:8.78:99,9,0	1/1:1,6:9:9.03:198,9,0	1/1:6,37:44:61.06:1760,61,0	0/0:23,0:23:54.07:0,54,593	1/1:2,18:20:30.10:658,30,0	0/0:20,0:20:42.02:0,42,440	0/0:5,0:5:8.98:0,9,93	0/0:33,0:33:96.11:0,96,1295	0/0:19,0:19:48.13:0,48,717	0/0:33,0:33:96.26:0,96,1438	0/0:18,0:18:48.12:0,48,696	0/0:18,0:18:48.10:0,48,672	0/0:28,0:28:75.19:0,75,1099	0/0:28,0:28:81.19:0,81,1160	0/0:17,0:17:41.54:0,42,418	0/0:10,0:10:27:0,27,268	0/0:76,0:76:99:0,174,2088	0/0:7,0:7:5.67:0,6,48	0/0:6,0:6:11.99:0,12,121	0/0:43,0:43:99:0,117,1543	1/1:10,0:10:23.82:171,24,0	0/0:27,0:27:54.07:0,54,573	0/0:20,0:19:54.13:0,54,772	0/0:9,0:9:26.83:0,27,323
chr10	109555943	.	T	TAAAAC	1015.97	PASS	AC=28;AF=0.667;AN=42;BaseQRankSum=-5.451;DP=200;FS=3.360;HRun=0;HaplotypeScore=47.9970;InbreedingCoeff=0.5955;MQ=71.51;MQ0=21;MQRankSum=1.152;QD=32.77;ReadPosRankSum=-3.022;VQSLOD=2.3348;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:14,0:14:33.11:0,33,658	0/0:46,0:10:22.62:0,23,333	0/0:49,0:12:23.10:0,23,263	1/1:1,1:5:9.02:150,9,0	1/1:1,0:1:3.01:96,3,0	1/1:1,0:1:3.01:87,3,0	1/1:1,0:2:2.99:66,3,0	1/1:2,0:2:6.02:102,6,0	0/0:19,0:18:50.14:0,50,881	0/0:17,0:17:50.98:0,51,783	1/1:2,0:1:3:25,3,0	./.	./.	1/1:1,0:1:3.01:53,3,0	0/0:14,0:14:38.76:0,39,774	1/1:3,0:2:3.01:38,3,0	./.	1/1:2,0:2:6.01:75,6,0	1/1:2,0:2:6.01:98,6,0	1/1:1,0:1:3.01:76,3,0	./.	./.	1/1:1,0:1:3.01:51,3,0	1/1:3,0:2:6.02:140,6,0	0/0:4,0:2:3.01:0,3,68	1/1:3,0:2:6:110,6,0	./.
chr10	109556547	.	G	GA	22876.92	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-12.359;DP=716;FS=3.145;HRun=2;HaplotypeScore=63.3637;InbreedingCoeff=0.9956;MQ=76.66;MQ0=0;MQRankSum=-4.083;QD=36.84;ReadPosRankSum=1.327;VQSLOD=5.5639;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,37:40:87.29:1252,87,0	0/0:5,0:5:15.05:0,15,186	0/0:15,0:15:27.13:0,27,282	0/0:15,0:15:33.98:0,34,397	1/1:1,30:31:78.13:1053,78,0	1/1:0,21:21:54.18:777,54,0	1/1:4,35:39:96.32:1382,96,0	1/1:0,31:31:90.29:1261,90,0	1/1:1,19:20:54.18:777,54,0	0/0:21,0:21:63.19:0,63,763	0/0:19,0:19:54.14:0,54,644	1/1:1,29:30:75.25:1078,75,0	1/1:1,34:35:93.20:1337,93,0	1/1:2,33:35:90.29:1276,90,0	1/1:1,33:34:87.29:1252,87,0	0/0:20,0:20:60.19:0,60,744	1/1:1,28:29:84.28:1209,84,0	1/1:0,33:33:87.29:1253,87,0	1/1:2,16:18:48.14:668,48,0	1/1:1,13:14:33.11:475,33,0	1/1:3,60:63:99:2115,147,0	1/1:0,26:26:75.21:1054,75,0	1/1:1,19:20:51.12:710,51,0	1/1:1,22:23:63.21:907,63,0	1/1:1,23:24:63.14:875,63,0	1/1:1,22:23:32.04:913,32,0	1/1:0,24:24:66.22:950,66,0	1/1:1,7:8:21.07:302,21,0
chr10	109557799	.	GAAAGGCA	G	2282.58	PASS	AB=0.805;AC=6;AF=0.107;AN=56;BaseQRankSum=11.383;DP=1250;FS=31.867;HRun=0;HaplotypeScore=431.0293;InbreedingCoeff=-0.1200;MQ=50.52;MQ0=4;MQRankSum=-9.544;QD=5.18;ReadPosRankSum=1.425;VQSLOD=0.3141;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,165,6279	0/0:13,0:13:36.12:0,36,1363	0/0:34,0:11:33.11:0,33,1231	0/0:30,0:12:31.35:0,31,1106	0/0:23,0:23:63.18:0,63,2177	0/0:26,0:26:78.26:0,78,2940	0/0:42,0:42:99:0,126,4716	0/0:42,0:42:99:0,123,4521	0/0:51,0:51:99:0,154,5832	0/0:34,0:34:93.32:0,93,3583	0/0:15,0:15:45.15:0,45,1592	0/1:79,18:97:99:766,0,3663	0/1:62,11:73:99:457,0,3047	0/1:53,16:70:99:624,0,3086	0/1:77,13:88:99:219,0,3541	0/0:52,0:52:99:0,157,6335	0/0:31,0:31:81.26:0,81,3066	0/0:30,0:30:90.29:0,90,3399	0/0:20,0:20:57.19:0,57,2059	0/0:20,0:20:57.20:0,57,2149	0/0:83,0:82:99:0,241,9362	0/1:39,24:62:99:312,0,1760	0/1:28,13:41:29.19:29,0,1507	0/0:85,6:91:94.17:0,94,4386	0/0:30,0:30:89.31:0,89,3390	0/0:33,0:33:96.32:0,96,3673	0/0:29,0:29:81.25:0,81,2875	0/0:18,0:18:54.18:0,54,1903
chr10	109557809	.	AAAGG	A	914.27	PASS	AB=0.801;AC=4;AF=0.071;AN=56;BaseQRankSum=9.842;DP=1167;FS=38.026;HRun=0;HaplotypeScore=371.4427;InbreedingCoeff=-0.0770;MQ=51.35;MQ0=5;MQRankSum=-9.752;QD=3.25;ReadPosRankSum=1.586;VQSLOD=1.2896;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,169,4355	0/0:10,0:10:30.10:0,30,842	0/0:36,0:17:51.17:0,51,1330	0/0:30,0:14:37.39:0,37,1018	0/0:19,0:19:57.18:0,57,1553	0/0:26,0:26:78.27:0,78,2234	0/0:42,0:42:99:0,126,3222	0/0:45,0:45:99:0,132,3384	0/0:49,0:49:99:0,147,3947	0/0:27,0:27:81.27:0,81,2272	0/0:12,0:12:33.10:0,33,892	0/1:67,18:84:99:351,0,2914	0/1:59,11:69:99:245,0,2393	0/1:51,16:67:99:358,0,2030	0/0:73,13:83:53.22:0,53,3106	0/0:56,0:56:99:0,169,4550	0/0:28,0:28:81.24:0,81,2164	0/0:28,0:28:84.25:0,84,2282	0/0:20,0:20:60.19:0,60,1620	0/0:19,0:19:51.03:0,51,1042	0/0:83,0:82:99:0,244,6434	0/1:33,24:54:69.95:70,0,1154	0/0:18,13:30:54.71:0,55,1080	0/0:76,6:78:99:0,173,3508	0/0:29,0:30:84.74:0,85,2302	0/0:31,0:31:90.77:0,91,2460	0/0:24,0:24:72.23:0,72,1919	0/0:15,0:15:45.14:0,45,1233
chr10	109558484	.	C	CTCCTGGACGG	18314.50	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-8.772;DP=786;FS=4.299;HRun=0;HaplotypeScore=236.6765;InbreedingCoeff=0.9509;MQ=79.64;MQ0=0;MQRankSum=-16.870;QD=82.87;ReadPosRankSum=2.879;VQSLOD=4.5848;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,102,2972	0/0:2,0:2:3.01:0,3,95	0/0:31,0:31:69.14:0,69,1683	0/0:26,0:26:48.16:0,48,1191	0/0:25,0:25:54.19:0,54,1602	0/0:21,0:21:54.18:0,54,1539	0/0:39,0:39:93.31:0,93,2837	0/0:23,0:23:60.21:0,60,1732	0/0:38,0:38:96.32:0,96,2799	0/0:22,0:22:60.20:0,60,1726	0/0:10,0:10:18.06:0,18,491	1/1:16,34:52:99:4343,99,0	1/1:10,30:42:96.33:4820,96,0	1/1:6,30:37:78.27:4009,78,0	1/1:8,23:34:66.23:3057,66,0	0/0:32,0:32:81.23:0,81,2204	0/0:40,0:40:99:0,108,3315	0/0:26,0:26:69.21:0,69,2049	0/0:32,0:32:75.26:0,75,2126	0/0:15,0:15:36.12:0,36,1048	0/0:48,0:48:99:0,132,3803	1/1:14,0:13:9.02:296,9,0	1/1:6,6:13:12.04:264,12,0	1/1:9,19:29:36.12:1525,36,0	0/0:21,0:21:42.13:0,42,1237	0/0:30,0:30:63.67:0,64,1716	0/0:28,0:28:75.24:0,75,2288	0/0:14,0:14:42.14:0,42,1274
chr10	109563240	.	T	TAAAC	19394.69	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-8.592;DP=586;FS=0.480;HRun=0;HaplotypeScore=132.0872;InbreedingCoeff=0.9865;MQ=73.14;MQ0=0;MQRankSum=-7.655;QD=44.38;ReadPosRankSum=1.549;VQSLOD=5.3864;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:33:72.19:1766,72,0	0/0:14,0:14:27.02:0,27,430	0/0:24,0:24:32.27:0,32,589	0/0:23,0:23:47.53:0,48,708	1/1:6,17:23:42.14:946,42,0	1/1:4,15:19:36.12:896,36,0	1/1:5,15:21:30.10:752,30,0	1/1:3,13:18:39.51:809,40,0	1/1:4,17:23:39.13:987,39,0	0/0:30,0:30:59.71:0,60,940	0/0:20,0:20:41.82:0,42,598	1/1:4,17:21:42.14:1059,42,0	1/1:7,15:23:48.15:1150,48,0	1/1:6,15:21:36.12:912,36,0	1/1:7,25:31:60.21:1503,60,0	0/0:38,0:38:90.23:0,90,1501	1/1:2,8:10:15.05:380,15,0	1/1:3,6:10:17.98:348,18,0	1/1:5,6:13:23.91:443,24,0	1/1:1,19:21:51:1118,51,0	1/1:3,12:15:33.03:777,33,0	1/1:2,12:14:36.12:876,36,0	1/1:6,8:15:18.95:440,19,0	1/1:10,12:24:27.98:605,28,0	1/1:5,12:18:36.12:911,36,0	1/1:6,19:26:60.16:1388,60,0	1/1:9,21:30:42.14:1043,42,0	1/1:0,3:5:12.04:288,12,0
chr10	109567603	.	CATAT	C	163.56	PASS	AB=0.965;AC=13;AF=0.241;AN=54;BaseQRankSum=3.226;DP=481;FS=28.469;HRun=0;HaplotypeScore=89.7055;InbreedingCoeff=0.0232;MQ=33.61;MQ0=17;MQRankSum=-6.105;QD=0.91;ReadPosRankSum=-1.240;VQSLOD=0.0527;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:19:0:0,0,0	0/0:10,0:10:12.01:0,12,184	0/0:4,0:3:8.98:0,9,137	0/0:10,1:3:1.47:0,1,49	./.	0/0:11,0:11:3.48:0,3,92	0/0:20,0:18:26.87:0,27,374	0/1:50,0:46:8.94:9,0,1725	0/0:17,0:17:5.98:0,6,114	0/0:40,0:36:69.04:0,69,1614	0/0:13,0:12:6.49:0,6,101	0/1:21,0:21:37.90:38,0,62	0/1:9,0:9:8.79:79,0,9	0/0:12,0:11:3.01:0,3,48	1/1:19,0:19:0.35:12,0,0	0/0:38,0:37:32.49:0,32,593	0/1:5,1:5:27.83:30,0,28	0/0:10,0:10:19.25:0,19,286	0/0:12,0:7:3.80:0,4,262	0/1:18,1:19:0.77:1,0,265	0/0:36,0:31:27.09:0,27,435	0/1:15,0:15:0:0,0,0	0/1:11,0:10:0:0,0,0	0/0:15,0:15:3.01:0,3,47	0/0:17,0:17:1.28:0,1,52	0/1:19,3:20:67.86:68,0,518	0/1:5,0:4:24.15:24,0,38	1/1:2,0:2:3.88:26,4,0
chr10	109567640	.	A	ACACT	67.89	PASS	AB=0.989;AC=11;AF=0.212;AN=52;BaseQRankSum=5.355;DP=638;FS=16.239;HRun=0;HaplotypeScore=158.2205;InbreedingCoeff=0.1934;MQ=38.31;MQ0=24;MQRankSum=-3.267;QD=0.53;ReadPosRankSum=-2.505;VQSLOD=0.9822;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:17,0:17:38.51:0,39,715	0/0:45,0:15:34.72:0,35,611	0/0:61,0:16:32.14:0,32,584	./.	1/1:10,0:10:2.69:7,3,0	0/0:18,0:17:24.08:0,24,426	0/0:36,0:32:17.11:0,17,1232	0/0:18,0:18:12.93:0,13,116	0/0:48,0:48:99:0,126,2477	0/0:26,0:26:31.87:0,32,616	0/1:23,0:24:2.54:3,0,70	1/1:9,0:9:1.47:5,1,0	0/0:9,0:8:2.99:0,3,24	0/0:22,0:22:0:0,0,1	0/0:53,0:53:99:0,103,1979	0/0:11,1:11:14.93:0,15,154	0/1:12,0:12:74.94:75,0,149	0/1:20,0:12:10.37:10,0,420	0/0:21,0:21:11.48:0,11,218	0/0:35,0:32:27.09:0,27,496	0/1:17,0:17:0:0,0,0	0/1:9,0:8:0:0,0,0	0/0:14,2:16:3.01:0,3,62	0/0:16,0:16:6.02:0,6,91	0/1:22,2:24:70.76:71,0,476	0/0:8,0:7:11.86:0,12,99	0/1:4,0:4:4.87:5,0,22
chr10	109567653	.	T	TACATACAC	7502.93	PASS	AB=0.740;AC=41;AF=0.732;AN=56;BaseQRankSum=2.985;DP=720;FS=54.308;HRun=0;HaplotypeScore=160.9710;InbreedingCoeff=0.6340;MQ=42.79;MQ0=19;MQRankSum=-4.506;QD=17.17;ReadPosRankSum=-5.788;VQSLOD=0.1800;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,6:22:0.01:0,0,0	0/0:17,0:17:37.23:0,37,978	0/0:67,0:25:44.80:0,45,1158	0/0:71,0:22:32.84:0,33,886	1/1:16,13:29:11.88:121,12,0	1/1:1,6:10:3.01:82,3,0	1/1:18,2:20:14.82:161,15,0	1/1:32,0:27:52.61:710,53,0	1/1:14,6:20:17.83:360,18,0	0/0:45,0:45:99:0,111,2929	0/0:25,0:25:31.39:0,31,876	1/1:17,13:30:16.70:379,17,0	1/1:10,6:16:14.55:255,15,0	1/1:14,2:15:12.02:199,12,0	1/1:11,12:23:1.53:3,2,0	0/0:55,0:55:99:0,120,2969	0/1:10,4:13:17.35:403,0,17	1/1:12,0:12:5.12:433,5,0	1/1:14,3:11:18.06:588,18,0	1/1:7,14:21:11.58:285,12,0	1/1:42,1:40:27.02:406,27,0	1/1:13,10:23:11.98:143,12,0	1/1:5,5:9:5.99:48,6,0	1/1:13,2:15:5.98:66,6,0	1/1:11,6:18:8.99:108,9,0	0/1:11,14:25:12.91:2199,0,13	1/1:11,3:13:15.03:429,15,0	1/1:1,3:4:3.01:128,3,0
chr10	109567713	.	CGT	C	845.65	PASS	AB=0.953;AC=14;AF=0.250;AN=56;BaseQRankSum=5.718;DP=897;FS=23.539;HRun=0;HaplotypeScore=227.1981;InbreedingCoeff=-0.1128;MQ=55.15;MQ0=6;MQRankSum=4.706;QD=2.14;ReadPosRankSum=-2.952;VQSLOD=0.8669;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:9.20:0,9,18	0/0:9,0:9:27.03:0,27,439	0/0:44,0:31:74.90:0,75,1278	0/0:68,0:49:99:0,114,1866	0/0:25,3:28:5.85:0,6,9	0/0:16,0:16:2.69:0,3,4	0/1:30,1:31:19.65:30,0,20	1/1:59,0:54:37.50:362,37,0	0/1:29,0:29:49.81:50,0,84	0/0:45,0:45:99:0,129,2404	0/0:18,0:18:33.07:0,33,568	0/0:46,3:49:21.78:0,22,106	0/1:21,1:22:48.81:59,0,49	0/1:29,1:30:8.85:9,0,73	0/0:36,0:36:10.13:0,10,15	0/0:56,0:56:99:0,111,2051	0/0:26,0:26:26.66:0,27,168	0/1:18,1:19:69.49:69,0,72	0/1:21,0:20:28.75:148,0,29	0/1:22,2:24:12.60:13,0,82	0/1:65,2:66:31.07:35,0,31	0/1:24,3:27:6.93:40,0,7	0/0:20,1:20:0.23:0,0,17	0/0:37,0:37:8.46:0,8,14	0/0:18,1:19:13.60:0,14,55	0/1:33,1:34:98.61:113,0,99	0/1:18,1:19:18.38:18,0,40	0/1:12,2:14:7.90:56,0,8
chr10	109567781	.	GAC	G	40.16	PASS	AB=0.953;AC=7;AF=0.125;AN=56;BaseQRankSum=0.287;DP=961;FS=0.000;HRun=0;HaplotypeScore=202.3487;InbreedingCoeff=0.0619;MQ=45.12;MQ0=33;MQRankSum=0.635;QD=0.25;ReadPosRankSum=0.349;VQSLOD=2.4670;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:6.95:0,7,75	0/1:10,1:11:2.43:2,0,414	0/0:108,0:29:42.06:0,42,570	0/0:125,0:41:45.75:0,46,539	0/0:25,0:25:5.95:0,6,42	0/0:22,0:22:8.29:0,8,88	0/0:35,0:32:6.99:0,7,113	0/0:40,0:37:37.21:0,37,409	0/1:25,0:25:0:0,0,0	0/1:28,3:30:99:112,0,692	0/0:19,2:20:3.56:0,4,502	0/0:37,0:37:9.23:0,9,84	0/0:16,0:15:5.59:0,6,66	0/0:30,0:28:5.95:0,6,44	0/0:46,0:46:9.12:0,9,110	0/1:55,4:60:6.73:7,0,1749	0/0:21,0:23:19.46:0,19,166	0/0:10,0:12:19.19:0,19,196	0/0:19,0:20:19.20:0,19,168	0/1:17,0:18:6.18:6,0,78	0/0:74,0:72:32.35:0,32,331	0/0:27,0:27:8.97:0,9,72	1/1:16,0:15:0.72:2,1,0	0/0:28,0:28:8.99:0,9,89	0/0:13,0:13:2.99:0,3,24	0/0:29,0:30:54.39:0,54,615	0/0:7,0:17:18.14:0,18,203	0/0:4,0:14:14.23:0,14,88
chr10	109568705	.	C	CACCCGGGA	43973.79	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-4.689;DP=626;FS=1.205;HRun=0;HaplotypeScore=148.8504;InbreedingCoeff=0.9951;MQ=81.04;MQ0=0;MQRankSum=-16.363;QD=90.85;ReadPosRankSum=0.432;VQSLOD=5.2193;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,13:33:66.17:2293,66,0	0/0:14,0:14:39.13:0,39,1056	0/0:29,0:28:72.22:0,72,1787	0/0:21,0:21:51.11:0,51,1133	1/1:5,17:27:60.07:2190,60,0	1/1:3,18:23:54.19:2365,54,0	1/1:12,15:28:69.24:2462,69,0	1/1:17,13:33:72.23:2735,72,0	1/1:4,11:18:48.16:1931,48,0	0/0:31,0:31:87.30:0,87,2372	0/0:21,0:21:63.21:0,63,1625	1/1:11,11:23:60.21:2199,60,0	1/1:7,11:20:49.05:1913,49,0	1/1:5,15:22:48.16:1955,48,0	1/1:9,20:31:84.29:3226,84,0	0/0:26,0:26:78.27:0,78,2107	1/1:5,15:24:45.15:1858,45,0	1/1:6,4:10:17.09:664,17,0	1/1:12,4:17:42.13:1412,42,0	1/1:7,18:28:72.17:2563,72,0	1/1:6,5:13:21.07:771,21,0	1/1:3,16:20:54.18:2193,54,0	1/1:8,10:19:36.12:1450,36,0	1/1:5,4:9:18.06:542,18,0	1/1:6,21:27:69.24:2913,69,0	1/1:9,17:28:78.27:3095,78,0	1/1:5,16:21:54.18:2191,54,0	1/1:0,8:10:24.08:1053,24,0
chr10	109570055	.	TG	T	2762.01	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.465;DP=465;FS=1.056;HRun=1;HaplotypeScore=47.4110;InbreedingCoeff=0.9458;MQ=93.33;MQ0=0;MQRankSum=0.701;QD=36.83;ReadPosRankSum=1.422;VQSLOD=3.7858;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:99:0,132,2110	0/0:8,0:8:24.08:0,24,384	0/0:17,0:17:51.15:0,51,763	0/0:24,0:24:69.20:0,69,1076	1/1:0,9:9:21.07:294,21,0	1/1:0,11:11:30.10:420,30,0	1/1:0,25:25:72.24:1007,72,0	0/0:18,0:18:51.17:0,51,795	1/1:0,16:16:48.16:671,48,0	0/0:21,0:21:60.20:0,60,939	0/0:3,0:3:9.03:0,9,142	0/0:17,0:17:51.16:0,51,791	0/0:17,0:17:51.16:0,51,787	0/0:20,0:20:60.20:0,60,959	0/0:12,0:12:36.12:0,36,573	0/0:15,0:15:45.15:0,45,720	0/0:20,0:20:60.18:0,60,926	0/0:22,0:22:66.19:0,66,1016	0/0:12,0:12:33.08:0,33,472	0/0:10,0:10:30.10:0,30,476	0/0:39,0:39:99:0,117,1836	0/0:11,0:11:33.11:0,33,526	0/0:10,0:10:30.09:0,30,451	0/0:14,0:14:42.12:0,42,646	1/1:0,14:14:39.09:544,39,0	0/0:23,0:23:69.24:0,69,1103	0/0:12,0:12:36.11:0,36,551	0/0:1,0:1:3.01:0,3,48
chr10	109570787	.	A	ATGTGTGTGTGTGTGTG	1179.27	PASS	AB=0.545;AC=19;AF=0.365;AN=52;BaseQRankSum=0.942;DP=482;FS=27.182;HRun=0;HaplotypeScore=183.8129;InbreedingCoeff=0.7419;MQ=86.85;MQ0=13;MQRankSum=-5.429;QD=11.45;ReadPosRankSum=-1.472;VQSLOD=1.0967;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:53.24:0,53,2260	0/0:6,0:6:18.06:0,18,820	0/0:63,0:32:55.03:0,55,1460	0/0:87,0:40:84.19:0,84,1917	1/1:9,0:9:3.39:51,3,0	0/1:1,0:6:0:0,0,0	1/1:4,0:16:3.01:111,3,0	0/0:18,0:18:48.11:0,48,1966	1/1:7,0:7:15.05:406,15,0	0/0:18,0:18:45.15:0,45,1955	0/0:13,0:13:33.11:0,33,1386	1/1:11,0:11:6.02:127,6,0	1/1:6,0:6:9.03:444,9,0	./.	1/1:5,0:10:3.01:137,3,0	0/0:20,0:20:48.16:0,48,2129	0/0:23,0:22:8.06:0,8,261	0/0:9,0:8:24.08:0,24,1034	0/0:11,0:11:21.54:0,22,856	0/0:13,0:13:30.09:0,30,1176	0/0:12,0:12:27.08:0,27,1082	1/1:10,0:10:3:25,3,0	./.	1/1:6,4:9:2.97:20,3,0	1/1:17,0:17:1.83:23,2,0	0/0:15,0:15:36.11:0,36,1307	0/0:15,0:15:12.96:0,13,303	0/0:13,0:13:27.09:0,27,1159
chr10	109570793	.	GAGAGAGAGAGAGAGAC	G	1231.24	PASS	AB=1.000;AC=27;AF=0.563;AN=48;BaseQRankSum=-2.940;DP=431;FS=18.635;HRun=0;HaplotypeScore=143.8839;InbreedingCoeff=0.5767;MQ=81.98;MQ0=16;MQRankSum=-1.978;QD=6.69;ReadPosRankSum=0.862;VQSLOD=1.7165;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:32.97:320,33,0	0/0:8,0:8:14.63:0,15,874	0/0:57,0:26:11.68:0,12,102	0/0:83,0:35:12.88:0,13,178	./.	0/1:4,0:4:0:0,0,0	./.	1/1:18,0:18:26.43:240,26,0	1/1:5,0:5:6.36:37,6,0	0/0:22,0:21:50.96:0,51,1798	0/0:18,0:18:39.08:0,39,1972	0/0:7,0:7:3.01:0,3,73	1/1:2,0:2:2.96:19,3,0	0/0:5,0:5:0.47:0,0,1	0/0:5,0:5:3.01:0,3,75	0/0:18,0:18:38.89:0,39,502	1/1:5,23:27:1.25:3,1,0	1/1:10,0:9:6.24:49,6,0	1/1:8,0:8:14.98:126,15,0	1/1:14,0:13:17.20:132,17,0	1/1:10,0:10:14.96:127,15,0	0/1:3,0:3:0:0,0,0	./.	./.	1/1:15,0:15:0.47:1,0,0	1/1:12,0:12:1.37:122,1,0	1/1:20,0:20:2.70:77,3,0	0/1:12,0:11:25.74:134,0,26
chr10	109570797	.	GAGAGAGAGAGAC	G	1361.66	PASS	AB=1.000;AC=27;AF=0.563;AN=48;BaseQRankSum=-2.780;DP=420;FS=36.931;HRun=0;HaplotypeScore=121.8400;InbreedingCoeff=0.6772;MQ=80.52;MQ0=16;MQRankSum=-2.206;QD=7.74;ReadPosRankSum=0.979;VQSLOD=0.5986;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:32.94:269,33,0	0/0:8,0:8:14.57:0,15,671	0/0:56,0:25:5.06:0,5,82	0/0:81,0:33:12.29:0,12,177	./.	0/1:4,0:4:0:0,0,0	./.	1/1:15,0:15:29.96:261,30,0	1/1:5,0:5:5.88:36,6,0	0/0:22,0:21:56.98:0,57,1484	0/0:21,0:21:48.11:0,48,1678	0/0:5,0:5:3.01:0,3,55	1/1:2,0:2:2.96:19,3,0	0/0:4,0:4:0:0,0,0	0/0:4,0:4:3.01:0,3,35	0/0:20,0:20:33.24:0,33,471	1/1:28,0:27:1.25:3,1,0	1/1:10,0:9:7.24:52,7,0	1/1:8,0:8:14.98:127,15,0	1/1:13,0:12:17.91:142,18,0	1/1:10,0:10:17.93:165,18,0	0/1:3,0:3:0:0,0,0	./.	./.	0/1:14,0:14:0.17:0,0,0	1/1:11,0:11:20.92:190,21,0	1/1:2,18:20:2.73:89,3,0	1/1:11,0:10:22.16:166,22,0
chr10	109570807	.	GAC	G	2284.60	PASS	AB=1.000;AC=34;AF=0.708;AN=48;BaseQRankSum=-0.182;DP=436;FS=0.589;HRun=0;HaplotypeScore=90.5556;InbreedingCoeff=0.4677;MQ=66.93;MQ0=16;MQRankSum=-2.012;QD=8.96;ReadPosRankSum=-3.785;VQSLOD=2.4957;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:59.76:490,60,0	0/1:8,0:8:0.52:1,0,143	0/0:47,0:18:4.44:0,4,80	0/0:63,0:22:13.14:0,13,178	./.	0/1:6,0:6:0:0,0,0	1/1:13,0:12:11.93:93,12,0	1/1:15,0:14:38.85:320,39,0	1/1:13,0:12:14.82:104,15,0	0/0:21,0:20:13.86:0,14,380	0/1:17,0:17:15.97:16,0,251	0/0:6,0:6:2.74:0,3,12	1/1:7,0:6:5.95:43,6,0	1/1:13,0:12:2.96:19,3,0	1/1:8,0:8:5.37:33,5,0	0/1:22,0:22:99:178,0,176	./.	1/1:8,0:7:10.78:75,11,0	1/1:7,0:7:20.95:175,21,0	1/1:12,0:11:20.90:167,21,0	1/1:12,0:12:23.73:186,24,0	0/1:5,0:5:0:0,0,0	./.	./.	0/1:14,0:14:0.03:0,0,0	1/1:15,0:14:41.74:323,42,0	1/1:19,0:19:2.88:19,3,0	1/1:11,0:10:23.91:187,24,0
chr10	109570879	.	C	CA	1369.60	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=3.773;DP=518;FS=22.779;HRun=7;HaplotypeScore=87.8384;InbreedingCoeff=0.9452;MQ=64.71;MQ0=2;MQRankSum=-6.100;QD=24.03;ReadPosRankSum=-0.109;VQSLOD=2.0305;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,116,1119	0/0:12,0:12:36.06:0,36,348	0/0:27,0:25:59.09:0,59,512	0/0:28,0:22:29.56:0,30,318	1/1:7,13:21:38.28:439,38,0	1/1:1,7:8:21.06:252,21,0	1/1:1,10:12:35.89:380,36,0	0/0:36,0:36:65.11:0,65,613	1/1:1,4:5:12.04:145,12,0	0/0:34,0:34:90.14:0,90,869	0/0:16,0:16:48.08:0,48,463	0/0:12,0:12:24.50:0,24,228	0/0:6,0:6:6:0,6,58	0/0:7,0:7:11.92:0,12,103	0/0:9,0:9:21.50:0,22,204	0/0:29,1:30:47.89:0,48,746	0/0:26,0:26:57.05:0,57,541	0/0:16,0:16:45.07:0,45,434	0/0:20,0:20:60.07:0,60,567	0/0:21,0:21:57.08:0,57,550	0/0:16,0:16:42.06:0,42,404	0/0:10,0:10:24.02:0,24,226	0/0:9,0:9:24.04:0,24,231	0/0:5,0:5:9.01:0,9,87	1/1:2,9:11:27.08:326,27,0	0/0:23,0:23:57.08:0,57,546	0/0:25,0:25:57.08:0,57,549	0/0:24,0:24:68.91:0,69,652
chr10	109571807	.	CT	C	4881.03	PASS	AB=0.800;AC=45;AF=0.804;AN=56;BaseQRankSum=4.979;DP=350;FS=1.491;HRun=10;HaplotypeScore=72.7228;InbreedingCoeff=0.7885;MQ=61.00;MQ0=9;MQRankSum=-4.744;QD=17.49;ReadPosRankSum=1.509;VQSLOD=5.5307;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,11:14:29.02:236,29,0	0/1:3,1:4:16.97:17,0,49	0/0:20,0:3:4.25:0,4,35	0/0:18,0:8:16.32:0,16,135	1/1:4,9:13:25.45:228,25,0	1/1:0,20:21:59.13:479,59,0	1/1:2,5:7:14.99:128,15,0	1/1:7,22:30:68.99:496,69,0	1/1:0,4:4:11.99:102,12,0	0/0:19,0:18:45.02:0,45,462	0/0:8,0:8:18.05:0,18,199	1/1:2,6:8:22.07:166,22,0	1/1:2,9:11:20.98:179,21,0	1/1:0,6:6:17.99:155,18,0	1/1:2,7:8:20.98:178,21,0	0/0:6,0:6:18.03:0,18,189	1/1:5,21:28:70.17:556,70,0	1/1:0,5:6:11.80:90,12,0	1/1:9,9:20:31.68:289,32,0	1/1:0,5:6:16.59:117,17,0	1/1:3,8:11:14.98:128,15,0	1/1:1,3:5:8.99:78,9,0	1/1:1,4:5:9:77,9,0	1/1:0,4:4:11.80:90,12,0	1/1:1,15:18:43.22:343,43,0	1/1:6,13:21:11.68:273,12,0	1/1:2,8:11:26.21:213,26,0	1/1:0,11:12:32.03:262,32,0
chr10	109572449	.	AACCCTATTTACAAAATTC	A	9772.78	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.129;DP=765;FS=4.293;HRun=0;HaplotypeScore=367.6650;InbreedingCoeff=0.9996;MQ=84.11;MQ0=0;MQRankSum=-12.942;QD=91.33;ReadPosRankSum=3.002;VQSLOD=3.9589;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,163,13213	0/0:10,0:10:30.10:0,30,2363	0/0:29,0:29:81.28:0,81,4955	0/0:20,0:20:54.19:0,54,3885	1/1:4,21:25:48.12:2186,48,0	1/1:4,19:23:48.16:2332,48,0	1/1:4,15:19:33.11:1516,33,0	0/0:26,0:25:66.23:0,66,4934	1/1:2,18:20:48.16:2402,48,0	0/0:34,0:34:99:0,102,8275	0/0:24,0:24:66.23:0,66,5451	0/0:37,0:37:99:0,108,8357	0/0:23,0:23:66.21:0,66,5187	0/0:27,0:27:78.27:0,78,6287	0/0:38,0:38:99:0,111,8943	0/0:28,0:28:81.28:0,81,6877	0/0:31,0:31:90.31:0,90,7514	0/0:24,0:24:72.21:0,72,5671	0/0:27,0:27:72.25:0,72,5297	0/0:34,0:34:96.33:0,96,7408	0/0:39,0:39:99:0,111,8785	0/0:31,0:31:87.29:0,87,6408	0/0:17,0:17:48.16:0,48,3665	0/0:38,0:38:99:0,105,8659	1/1:6,14:20:27.09:1337,27,0	0/0:22,0:22:63.22:0,63,5192	0/0:20,0:20:57.18:0,57,4551	0/0:18,0:18:51.18:0,51,4424
chr10	109573328	.	AT	A	2292.96	PASS	AB=0.966;AC=11;AF=0.196;AN=56;BaseQRankSum=11.716;DP=664;FS=7.998;HRun=10;HaplotypeScore=66.4156;InbreedingCoeff=0.8698;MQ=76.00;MQ0=1;MQRankSum=-0.482;QD=15.60;ReadPosRankSum=1.872;VQSLOD=3.7863;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:37:73.20:0,73,1027	0/0:10,0:10:26.94:0,27,280	0/1:27,1:23:5.08:5,0,346	0/0:14,0:14:16.55:0,17,178	1/1:3,22:25:65.93:563,66,0	1/1:3,18:21:41.99:365,42,0	1/1:1,17:18:41.99:365,42,0	0/0:36,0:36:78.19:0,78,842	1/1:2,20:22:56.99:495,57,0	0/0:35,0:35:95.28:0,95,1024	0/0:24,0:24:63.17:0,63,697	0/0:20,0:20:48.12:0,48,520	0/0:21,0:21:60.15:0,60,655	0/0:12,0:12:33.09:0,33,365	0/0:23,0:23:60.11:0,60,636	0/0:29,1:30:61.17:0,61,894	0/0:35,0:36:96.08:0,96,1034	0/0:25,0:25:66.15:0,66,715	0/0:16,0:16:35.91:0,36,363	0/0:24,0:24:60.15:0,60,656	0/0:15,1:16:19.06:0,19,431	0/0:14,1:15:4.03:0,4,273	0/0:22,0:22:54.15:0,54,597	0/0:24,0:24:69.19:0,69,763	1/1:1,32:33:77.97:677,78,0	0/0:35,0:35:98.60:0,99,1053	0/0:32,0:32:78.20:0,78,853	0/0:8,1:9:10.58:0,11,249
chr10	109573758	.	CAGGTGCCAAT	C	1882.80	PASS	AB=0.940;AC=14;AF=0.250;AN=56;BaseQRankSum=8.320;DP=761;FS=8.458;HRun=0;HaplotypeScore=221.3535;InbreedingCoeff=-0.3401;MQ=51.71;MQ0=11;MQRankSum=-7.398;QD=5.14;ReadPosRankSum=-2.150;VQSLOD=1.1105;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,2:38:70.56:0,71,2532	0/0:9,0:9:27.09:0,27,1336	0/0:57,0:22:60.07:0,60,2196	0/0:58,0:37:99:0,102,3373	0/1:28,0:28:99:311,0,1712	0/1:33,0:33:76.73:77,0,2272	0/1:20,0:20:74.97:75,0,1773	0/1:37,2:35:90:90,0,4807	0/1:29,0:29:73.97:74,0,2020	0/0:37,0:37:96.33:0,96,4789	0/0:19,0:19:57.18:0,57,2643	0/1:29,0:29:41.36:41,0,1403	0/1:16,3:20:99:109,0,614	0/1:23,2:25:99:151,0,1529	0/1:27,6:33:99:310,0,1819	0/0:40,0:40:99:0,106,5947	0/0:20,0:20:36.12:0,36,1239	0/0:15,0:15:6.43:0,6,1155	0/0:23,0:23:60.20:0,60,2280	0/1:17,2:19:67.52:68,0,1095	0/0:29,0:28:45.26:0,45,1770	0/0:15,0:15:20.76:0,21,751	0/0:11,0:10:18.06:0,18,823	0/1:19,9:27:42.74:43,0,1517	0/0:23,0:23:39.07:0,39,1301	0/1:33,2:33:99:361,0,3021	0/1:25,0:24:99:292,0,2323	0/1:3,0:3:38.14:38,0,298
chr10	109573768	.	T	TACACACACACACACACAC	9649.78	PASS	AB=0.596;AC=37;AF=0.712;AN=52;BaseQRankSum=0.450;DP=807;FS=12.228;HRun=0;HaplotypeScore=308.9857;InbreedingCoeff=0.5830;MQ=47.76;MQ0=15;MQRankSum=-6.978;QD=17.39;ReadPosRankSum=-3.555;VQSLOD=1.5494;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:43,0:42:20.97:605,21,0	0/0:7,0:9:18.06:0,18,828	0/0:64,0:20:14.77:0,15,375	0/0:53,0:29:21.39:0,21,694	1/1:11,0:29:15.52:318,16,0	0/1:11,0:38:49.22:147,0,49	1/1:12,0:22:11.53:189,12,0	1/1:46,0:40:35.79:789,36,0	0/1:12,0:36:99:185,0,104	0/0:30,0:31:63.06:0,63,2360	0/0:18,0:19:33.11:0,33,1366	1/1:11,15:28:6.02:446,6,0	1/1:9,0:26:15.35:604,15,0	1/1:18,0:32:15.52:583,16,0	1/1:33,0:33:27.06:874,27,0	0/0:38,0:41:98.13:0,98,4175	1/1:14,8:26:15.05:848,15,0	1/1:8,0:20:5.60:339,6,0	1/1:22,0:22:30:1083,30,0	1/1:17,0:17:6.49:141,6,0	1/1:25,0:25:6.02:172,6,0	./.	./.	1/1:25,0:24:3.01:131,3,0	0/1:9,0:26:55.94:56,0,56	1/1:30,0:28:56.73:1071,57,0	1/1:24,0:24:29.95:836,30,0	1/1:2,2:7:3.01:235,3,0
chr10	109574166	.	CTCCGAAAAAAAGA	C	1791.82	PASS	AB=0.954;AC=12;AF=0.231;AN=52;BaseQRankSum=9.933;DP=343;FS=34.649;HRun=0;HaplotypeScore=108.7647;InbreedingCoeff=0.0645;MQ=43.40;MQ0=18;MQRankSum=-0.938;QD=13.08;ReadPosRankSum=0.992;VQSLOD=0.1976;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:22:37.96:108,0,38	0/0:4,0:4:12.04:0,12,485	./.	./.	0/0:12,0:11:30.10:0,30,1132	0/0:6,0:6:12.04:0,12,312	0/0:13,0:9:27.09:0,27,1028	0/1:7,0:7:13.60:72,0,14	0/0:8,0:7:18.05:0,18,740	0/0:17,0:17:48.15:0,48,1436	0/0:11,0:11:30.10:0,30,956	0/0:16,0:16:45.15:0,45,1906	0/0:11,0:11:30.10:0,30,1296	0/0:16,0:16:48.13:0,48,1643	0/0:23,0:23:69.19:0,69,2406	0/0:9,0:9:24.08:0,24,632	1/1:23,0:22:3.01:60,3,0	0/1:15,0:15:17.44:225,0,17	0/1:5,7:10:26.24:178,0,26	0/1:8,0:8:11.19:144,0,11	0/1:15,0:12:8.18:218,0,8	0/0:10,0:10:27.09:0,27,800	0/0:11,0:10:30.02:0,30,1135	0/0:11,0:10:30.09:0,30,1293	0/0:22,0:20:54.17:0,54,1825	0/1:15,0:13:15.68:547,0,16	0/1:12,0:10:27.15:278,0,27	1/1:7,0:5:3.01:107,3,0
chr10	109574169	.	CGAAAAAAAGAACCAA	C	3027.91	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=5.879;DP=340;FS=6.641;HRun=0;HaplotypeScore=110.3480;InbreedingCoeff=0.8870;MQ=42.93;MQ0=18;MQRankSum=-0.229;QD=24.22;ReadPosRankSum=0.181;VQSLOD=1.8067;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:21:5.92:175,6,0	0/0:4,0:4:11.91:0,12,513	0/0:3,0:1:1.82:0,2,5	./.	0/0:12,0:11:30.09:0,30,1092	0/0:7,0:7:17.93:0,18,522	0/0:14,0:10:29.97:0,30,1116	1/1:5,0:5:14.93:186,15,0	0/0:6,0:5:15.05:0,15,682	0/0:18,0:18:49.16:0,49,1354	0/0:11,0:11:29.91:0,30,942	0/0:17,0:17:47.95:0,48,1971	0/0:12,0:12:33.56:0,34,1429	0/0:15,0:15:45.13:0,45,1504	0/0:23,0:23:68.89:0,69,2654	0/0:12,0:12:33:0,33,917	1/1:2,23:24:3.01:100,3,0	1/1:14,0:14:32.02:471,32,0	1/1:9,0:9:23.45:336,23,0	1/1:7,0:7:13.70:249,14,0	1/1:14,0:10:18.04:358,18,0	0/0:10,0:10:27.04:0,27,721	0/0:11,0:10:30:0,30,1338	0/0:16,0:15:39.60:0,40,1627	0/0:20,0:18:50.85:0,51,1674	1/1:2,0:11:30.09:800,30,0	1/1:10,0:8:21.05:425,21,0	1/1:2,0:5:3.01:129,3,0
chr10	109574177	.	AGAACC	A	1757.62	PASS	AB=0.800;AC=23;AF=0.411;AN=56;BaseQRankSum=8.322;DP=372;FS=15.530;HRun=0;HaplotypeScore=64.5112;InbreedingCoeff=0.7949;MQ=43.10;MQ0=26;MQRankSum=-0.865;QD=13.95;ReadPosRankSum=1.356;VQSLOD=0.7672;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:21:6.02:118,6,0	0/0:6,0:6:14.88:0,15,218	1/1:7,1:2:4.26:61,4,0	0/1:6,1:3:6.27:11,0,6	0/0:18,0:17:42.37:0,42,677	0/0:7,0:7:14.90:0,15,210	0/0:19,0:14:40.95:0,41,611	1/1:2,1:2:5.99:85,6,0	0/0:9,0:7:15.03:0,15,290	0/0:14,0:14:35.85:0,36,656	0/0:9,0:9:23.57:0,24,419	0/0:20,0:20:44.65:0,45,1003	0/0:14,0:14:30.83:0,31,765	0/0:19,0:18:51.09:0,51,931	0/0:24,0:24:72.19:0,72,1457	0/0:19,0:18:23.63:0,24,545	1/1:25,0:24:3.01:39,3,0	1/1:1,7:8:15.02:268,15,0	1/1:7,0:7:3.55:172,4,0	1/1:1,5:5:11.63:167,12,0	1/1:3,8:8:12.04:232,12,0	0/0:11,0:11:29.76:0,30,401	0/0:12,0:11:18.78:0,19,530	0/0:24,0:20:24.36:0,24,686	0/0:21,0:18:50.95:0,51,900	1/1:11,1:11:26.92:461,27,0	1/1:2,6:6:15.05:299,15,0	1/1:8,0:5:3.01:42,3,0
chr10	109576409	.	GAGGA	G	1950.99	PASS	AB=0.960;AC=13;AF=0.241;AN=54;BaseQRankSum=9.052;DP=599;FS=1.275;HRun=0;HaplotypeScore=94.9578;InbreedingCoeff=0.8064;MQ=58.63;MQ0=5;MQRankSum=0.723;QD=12.43;ReadPosRankSum=1.203;VQSLOD=3.0092;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:53:75.26:0,75,1626	0/0:5,0:5:6.02:0,6,115	./.	0/0:16,0:10:0:0,0,0	0/0:25,0:25:24.08:0,24,531	0/0:15,0:18:24.08:0,24,467	0/0:18,0:18:18.06:0,18,392	0/0:12,0:11:6.02:0,6,103	0/1:23,1:24:16.28:16,0,539	0/0:27,0:27:45.15:0,45,1011	0/0:12,0:12:18.06:0,18,393	1/1:14,11:25:15.05:232,15,0	1/1:5,8:12:12.04:186,12,0	0/0:22,0:22:39.12:0,39,826	1/1:17,18:36:42.14:631,42,0	0/0:25,0:25:39.12:0,39,869	0/0:23,0:23:32.84:0,33,774	0/0:17,0:26:27.09:0,27,445	0/0:11,0:11:9.03:0,9,186	0/0:19,0:19:18.06:0,18,418	0/0:30,0:30:48.16:0,48,1069	1/1:9,8:17:18.06:278,18,0	1/1:7,14:20:30.10:464,30,0	1/1:9,12:20:21.07:325,21,0	0/0:17,0:16:24.08:0,24,563	0/0:31,0:31:45.15:0,45,977	0/0:14,0:14:18.06:0,18,422	0/0:6,0:6:15.05:0,15,333
chr10	109577396	.	G	GT	5099.09	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-11.020;DP=783;FS=4.425;HRun=1;HaplotypeScore=72.2289;InbreedingCoeff=0.9980;MQ=62.11;MQ0=4;MQRankSum=1.752;QD=36.16;ReadPosRankSum=1.099;VQSLOD=5.2494;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,150,1852	0/0:10,0:10:30.06:0,30,358	0/0:29,0:22:66.18:0,66,812	0/0:28,0:18:51.16:0,51,641	1/1:2,28:30:69.01:932,69,0	1/1:0,21:21:42.14:630,42,0	1/1:0,26:26:75.25:1124,75,0	0/0:30,0:30:84.26:0,84,1078	1/1:4,31:35:87.20:1253,87,0	0/0:32,0:32:93.29:0,93,1185	0/0:15,0:15:39.13:0,39,506	0/0:29,0:29:84.25:0,84,1061	0/0:22,0:22:63.19:0,63,802	0/0:34,0:34:99:0,99,1285	0/0:40,0:40:99:0,117,1519	0/0:35,1:36:60.33:0,60,1260	0/0:38,0:38:99:0,108,1385	0/0:18,0:18:48.16:0,48,623	0/0:24,0:23:60.19:0,60,779	0/0:16,0:16:39.06:0,39,485	0/0:49,0:49:99:0,141,1768	0/0:18,0:18:45.08:0,45,554	0/0:22,0:22:51.15:0,51,648	0/0:34,0:34:99:0,99,1270	1/1:1,28:28:78.26:1161,78,0	0/0:23,0:23:60.14:0,60,735	0/0:30,0:30:84.27:0,84,1090	0/0:8,0:8:18.06:0,18,234
chr10	109579612	.	C	CT	5016.38	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-5.962;DP=674;FS=0.000;HRun=6;HaplotypeScore=65.5476;InbreedingCoeff=0.9964;MQ=79.95;MQ0=0;MQRankSum=-1.129;QD=31.75;ReadPosRankSum=2.670;VQSLOD=5.2850;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,144,1443	0/0:5,0:5:15.03:0,15,153	0/0:19,0:19:40.76:0,41,387	0/0:15,0:15:24.72:0,25,344	0/0:21,0:21:57.12:0,57,580	0/0:26,0:26:72.14:0,72,725	0/0:31,0:31:81.12:0,81,799	0/0:33,0:33:87.13:0,87,858	0/0:35,0:35:99:0,102,1026	0/0:28,0:28:81.17:0,81,822	0/0:13,0:13:36.08:0,36,367	1/1:0,14:14:39.12:491,39,0	1/1:2,26:28:65.95:830,66,0	1/1:3,27:30:78.24:968,78,0	1/1:1,33:34:87.28:1094,87,0	0/0:33,0:32:93.20:0,93,942	0/0:23,0:23:60.07:0,60,593	0/0:23,0:22:57.06:0,57,559	0/0:28,0:28:75.14:0,75,747	0/0:20,0:20:54.09:0,54,537	0/0:25,0:25:75.14:0,75,752	1/1:0,15:15:42.09:511,42,0	1/1:2,9:11:27.08:330,27,0	1/1:0,26:26:63.20:793,63,0	0/0:12,0:12:33.03:0,33,326	0/0:27,0:27:78.10:0,78,777	0/0:32,0:32:90.19:0,90,910	0/0:12,0:12:30.06:0,30,306
chr10	109580974	.	C	CT	786.96	PASS	AB=0.911;AC=13;AF=0.232;AN=56;BaseQRankSum=1.139;DP=629;FS=0.602;HRun=9;HaplotypeScore=79.5061;InbreedingCoeff=0.6501;MQ=49.51;MQ0=40;MQRankSum=-1.684;QD=7.57;ReadPosRankSum=-0.062;VQSLOD=1.5274;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:38:58.15:0,58,477	0/1:8,0:8:8.85:9,0,127	0/0:81,0:16:15.97:0,16,143	0/0:83,0:14:4.42:0,4,76	0/0:21,0:19:38.07:0,38,329	0/0:16,0:15:13.26:0,13,191	0/0:21,0:21:50.75:0,51,418	0/0:28,0:27:59.96:0,60,517	0/0:15,0:13:25.39:0,25,178	0/0:12,0:12:23.82:0,24,196	0/0:16,0:15:37.80:0,38,314	1/1:6,0:6:6.01:58,6,0	1/1:8,1:9:12:119,12,0	0/1:12,3:14:15.20:72,0,15	1/1:17,0:17:4.70:37,5,0	0/0:21,0:20:35.92:0,36,301	0/0:22,0:21:44.98:0,45,387	0/0:22,0:22:59.62:0,60,499	0/0:19,0:18:38.95:0,39,334	0/0:20,0:19:6.74:0,7,236	0/0:9,0:8:21:0,21,182	1/1:12,2:13:23.86:234,24,0	0/1:20,0:20:2.56:159,0,3	1/1:14,0:14:28.78:269,29,0	0/0:15,0:14:28.68:0,29,230	0/0:23,0:23:50.97:0,51,437	0/0:20,0:19:47.88:0,48,397	0/0:21,0:15:35.97:0,36,310
chr10	109580981	.	TTTC	T	710.52	PASS	AB=0.875;AC=13;AF=0.232;AN=56;BaseQRankSum=1.669;DP=616;FS=15.067;HRun=0;HaplotypeScore=90.3050;InbreedingCoeff=0.8079;MQ=47.99;MQ0=46;MQRankSum=-4.065;QD=7.32;ReadPosRankSum=-1.012;VQSLOD=1.4343;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:34:53.83:0,54,430	0/0:9,0:8:21.02:0,21,240	0/0:69,0:12:22.03:0,22,210	0/0:77,0:11:6.22:0,6,76	0/0:23,0:20:35.57:0,36,479	0/0:18,0:17:9.82:0,10,268	0/0:25,0:23:33.31:0,33,608	0/0:26,0:25:46.25:0,46,492	0/0:14,0:12:27.70:0,28,234	0/0:11,0:11:8.83:0,9,295	0/0:17,0:15:21.93:0,22,342	1/1:6,0:6:5.23:42,5,0	1/1:7,1:8:14.89:104,15,0	0/1:12,2:13:7.95:83,0,8	1/1:16,1:17:11.78:96,12,0	0/0:21,0:20:40.88:0,41,422	0/0:26,0:24:47.04:0,47,360	0/0:21,0:20:59.18:0,59,470	0/0:17,0:16:38.70:0,39,333	0/0:19,0:17:29.31:0,29,287	0/0:9,0:7:20.95:0,21,190	1/1:15,0:14:20.21:154,20,0	1/1:19,2:21:7.87:185,8,0	1/1:13,3:16:29.49:225,29,0	0/0:17,0:16:6.80:0,7,281	0/0:20,0:20:44.30:0,44,445	0/0:19,0:18:47.92:0,48,462	0/0:24,0:17:34.62:0,35,261
chr10	109580982	.	TTC	T	889.29	PASS	AB=0.958;AC=15;AF=0.268;AN=56;BaseQRankSum=1.111;DP=616;FS=13.537;HRun=0;HaplotypeScore=81.3336;InbreedingCoeff=0.6874;MQ=47.96;MQ0=46;MQRankSum=-5.280;QD=6.89;ReadPosRankSum=-0.868;VQSLOD=1.9659;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:34:48:0,48,309	0/0:9,0:8:20.89:0,21,195	0/0:68,1:12:21.16:0,21,175	0/0:75,0:10:6.08:0,6,56	0/0:23,0:20:31.58:0,32,374	0/1:18,0:17:5.79:6,0,187	0/0:25,0:23:3.70:0,4,441	0/0:25,0:24:42.30:0,42,418	0/0:14,0:12:11.38:0,11,161	0/1:12,0:12:5.53:6,0,229	0/0:17,0:15:21.33:0,21,280	1/1:6,0:6:5.95:46,6,0	1/1:8,0:8:17.02:100,17,0	0/1:12,2:13:5.70:97,0,6	1/1:3,14:17:12.03:138,12,0	0/0:21,0:20:28.51:0,29,312	0/0:26,0:24:42.40:0,42,256	0/0:21,0:20:56.33:0,56,371	0/0:17,0:16:38.32:0,38,295	0/0:19,0:17:21.37:0,21,215	0/0:9,0:7:20.64:0,21,154	1/1:12,3:14:25.98:219,26,0	1/1:7,14:21:16.68:212,17,0	1/1:15,3:17:33.90:247,34,0	0/0:17,0:16:5.96:0,6,220	0/0:20,0:20:43.69:0,44,355	0/0:19,0:18:45.97:0,46,351	0/0:24,0:17:27.87:0,28,205
chr10	109581097	.	TTTTCTTTC	T	2332.02	PASS	AB=0.957;AC=29;AF=0.558;AN=52;BaseQRankSum=-0.190;DP=501;FS=8.205;HRun=0;HaplotypeScore=136.0518;InbreedingCoeff=0.6659;MQ=57.15;MQ0=13;MQRankSum=-6.226;QD=7.52;ReadPosRankSum=0.201;VQSLOD=1.8825;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:15.73:106,16,0	0/0:8,0:8:15.05:0,15,548	./.	./.	1/1:12,10:22:15.05:337,15,0	1/1:5,9:13:3.01:75,3,0	1/1:12,0:11:9.03:152,9,0	1/1:23,0:19:8.94:85,9,0	1/1:6,8:14:12.04:301,12,0	0/0:7,0:11:12.58:0,13,124	0/0:18,0:18:33.11:0,33,1009	0/0:7,0:19:14.98:0,15,203	0/0:5,0:7:11.97:0,12,97	0/0:13,0:13:13.21:0,13,98	0/0:20,0:20:19.30:0,19,171	0/0:11,0:11:21.07:0,21,715	1/1:14,0:13:3.33:56,3,0	0/1:31,0:29:4.92:205,0,5	1/1:13,0:13:7.42:77,7,0	1/1:23,0:22:15.97:112,16,0	0/1:15,0:15:26.39:37,0,26	0/0:16,0:17:31.20:0,31,252	0/1:17,0:17:22.69:23,0,173	0/0:25,0:25:38.32:0,38,281	1/1:11,21:32:24.08:596,24,0	1/1:19,0:17:23.57:169,24,0	1/1:24,0:24:11.96:128,12,0	1/1:13,0:13:10.09:70,10,0
chr10	109581152	.	CCTTT	C	3937.09	PASS	AB=1.000;AC=33;AF=0.660;AN=50;BaseQRankSum=6.925;DP=462;FS=20.286;HRun=0;HaplotypeScore=106.8710;InbreedingCoeff=0.7361;MQ=47.81;MQ0=16;MQRankSum=-2.234;QD=12.23;ReadPosRankSum=-0.509;VQSLOD=1.2000;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:19:11.34:87,11,0	0/0:11,0:11:21.07:0,21,497	./.	./.	0/0:17,0:17:27.09:0,27,588	0/0:17,0:16:3.01:0,3,71	0/0:12,0:9:21.07:0,21,495	1/1:17,0:10:1.25:3,1,0	0/0:11,0:11:3:0,3,25	0/0:18,0:16:36.12:0,36,781	0/1:14,0:13:21.19:21,0,473	1/1:17,10:27:45.15:695,45,0	1/1:3,12:15:14.86:235,15,0	1/1:6,5:10:18.06:263,18,0	1/1:4,14:18:9.03:141,9,0	0/0:16,0:16:30.10:0,30,692	1/1:9,0:18:14.39:135,14,0	1/1:22,1:21:21.07:307,21,0	1/1:14,0:10:9.02:90,9,0	1/1:16,0:18:8.74:51,9,0	1/1:9,0:9:2.94:48,3,0	1/1:19,3:19:30.10:468,30,0	1/1:18,7:23:40.02:613,40,0	1/1:23,5:28:18.57:456,19,0	0/0:24,0:24:12.03:0,12,229	1/1:8,0:18:26.58:249,27,0	1/1:15,0:18:8.93:76,9,0	./.
chr10	109581203	.	GGCGT	G	4159.97	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=7.130;DP=479;FS=1.200;HRun=0;HaplotypeScore=113.8087;InbreedingCoeff=0.7149;MQ=64.31;MQ0=7;MQRankSum=-6.277;QD=11.34;ReadPosRankSum=2.335;VQSLOD=3.3183;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:6.02:74,6,0	0/1:12,0:12:6.50:7,0,307	0/0:38,0:22:40.39:0,40,386	0/0:26,0:16:40.66:0,41,439	1/1:19,0:19:23.85:256,24,0	1/1:19,1:19:3.24:54,3,0	1/1:7,8:15:3.01:53,3,0	1/1:16,0:13:31.98:258,32,0	1/1:14,2:16:7.24:107,7,0	0/0:14,0:14:35.90:0,36,329	0/0:15,0:15:32.99:0,33,480	1/1:27,0:27:59.89:540,60,0	1/1:15,0:15:23.92:219,24,0	1/1:19,0:18:26.83:285,27,0	1/1:20,0:20:26.99:277,27,0	0/0:19,0:19:45.40:0,45,670	1/1:15,0:15:20.73:153,21,0	1/1:18,0:18:29.83:247,30,0	1/1:15,0:15:32.92:289,33,0	1/1:9,0:9:14.92:115,15,0	1/1:15,0:14:3.01:37,3,0	1/1:22,0:22:41.91:372,42,0	1/1:16,0:15:23.99:221,24,0	1/1:35,0:34:32.90:327,33,0	1/1:9,0:9:1.89:2,2,0	1/1:11,0:11:20.82:157,21,0	1/1:7,0:7:8.92:75,9,0	1/1:1,0:1:3.01:37,3,0
chr10	109581209	.	CGTGCGT	C	4863.43	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=5.711;DP=480;FS=3.150;HRun=0;HaplotypeScore=121.0213;InbreedingCoeff=0.7310;MQ=62.01;MQ0=8;MQRankSum=-4.917;QD=15.69;ReadPosRankSum=3.182;VQSLOD=4.3860;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,12:17:6.02:140,6,0	0/0:10,0:10:20.58:0,21,446	0/0:35,0:20:40.14:0,40,422	0/0:26,0:16:40.72:0,41,503	0/1:18,0:18:30.80:207,0,31	0/0:25,0:24:5.74:0,6,76	0/1:11,0:11:5.60:6,0,63	1/1:17,0:14:31.43:256,31,0	0/0:19,0:18:1.53:0,2,88	0/0:13,0:13:38.91:0,39,430	0/0:16,0:16:36:0,36,657	1/1:20,0:26:59.90:623,60,0	1/1:10,0:14:23.93:274,24,0	1/1:3,0:17:26.84:382,27,0	1/1:13,0:19:26.33:358,26,0	0/0:19,0:19:48.42:0,48,893	1/1:17,1:18:23.44:219,23,0	1/1:11,3:15:29.83:314,30,0	1/1:4,10:14:33.30:356,33,0	1/1:9,1:10:14.99:135,15,0	1/1:2,16:17:3.01:70,3,0	1/1:15,0:20:41.92:413,42,0	1/1:14,0:15:30.01:350,30,0	1/1:27,1:35:33.01:397,33,0	0/0:7,0:7:12:0,12,102	1/1:10,0:10:23.62:184,24,0	1/1:5,7:12:9.31:109,9,0	1/1:0,1:1:3.01:70,3,0
chr10	109581211	.	TGC	T	4093.14	PASS	AB=0.964;AC=44;AF=0.786;AN=56;BaseQRankSum=6.658;DP=480;FS=0.534;HRun=0;HaplotypeScore=101.2542;InbreedingCoeff=0.7159;MQ=61.72;MQ0=9;MQRankSum=-5.077;QD=10.92;ReadPosRankSum=2.789;VQSLOD=3.5132;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:5.98:46,6,0	0/0:9,0:9:20.01:0,20,241	0/0:35,0:19:40.57:0,41,386	0/0:26,0:16:40.66:0,41,419	1/1:18,0:18:36.82:293,37,0	1/1:3,21:23:15.01:198,15,0	0/1:12,1:13:6.22:91,0,6	1/1:16,0:13:31.12:256,31,0	1/1:5,14:18:17.97:221,18,0	0/0:15,0:14:18.62:0,19,279	0/1:15,0:15:6.51:7,0,261	1/1:24,0:24:59.51:462,60,0	1/1:14,0:14:23.75:165,24,0	1/1:17,0:17:26.66:187,27,0	1/1:20,0:20:11.26:180,11,0	0/0:20,0:20:35.92:0,36,569	1/1:17,0:17:23.08:147,23,0	1/1:15,0:15:29.79:219,30,0	1/1:15,0:15:17.03:242,17,0	1/1:10,0:10:14.92:115,15,0	1/1:16,0:15:2.99:23,3,0	1/1:21,0:21:41.82:330,42,0	1/1:14,0:15:29.58:222,30,0	1/1:35,0:34:32.88:257,33,0	1/1:0,7:7:12.04:183,12,0	1/1:13,0:12:23.71:165,24,0	1/1:12,0:12:9.33:62,9,0	1/1:1,0:1:2.99:23,3,0
chr10	109581213	.	C	CGT	284.75	PASS	AB=1.000;AC=10;AF=0.200;AN=50;BaseQRankSum=-4.559;DP=485;FS=4.309;HRun=0;HaplotypeScore=118.6737;InbreedingCoeff=0.3026;MQ=61.59;MQ0=10;MQRankSum=3.041;QD=2.45;ReadPosRankSum=-3.008;VQSLOD=1.6577;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:8.67:0,9,52	0/0:7,0:9:11.87:0,12,113	./.	./.	1/1:18,0:18:0.89:2,1,0	0/1:26,0:25:27.58:30,0,28	0/1:14,0:14:22.35:72,0,22	./.	0/0:19,0:18:14.88:0,15,64	1/1:13,3:15:9.47:113,9,0	1/1:9,6:15:12.04:178,12,0	0/0:24,0:24:12.48:0,12,55	0/0:13,0:13:8.78:0,9,41	0/0:17,0:17:19.84:0,20,97	0/0:19,0:19:17.15:0,17,88	0/0:19,0:19:8.77:0,9,216	0/1:15,0:16:0.44:0,0,27	0/0:15,0:15:5.64:0,6,27	0/0:16,0:16:11.80:0,12,71	0/0:11,0:11:0:0,0,0	0/0:16,0:15:2.84:0,3,14	0/0:22,0:22:8.56:0,9,43	0/0:14,0:13:11.61:0,12,68	0/0:36,0:35:17.09:0,17,93	0/0:8,0:8:8.88:0,9,29	0/1:10,0:10:8.30:16,0,8	0/0:12,0:12:2.82:0,3,14	0/0:1,0:1:2.84:0,3,14
chr10	109581849	.	C	CCACACACACACACACACACACA	21935.11	PASS	AB=0.973;AC=43;AF=0.768;AN=56;BaseQRankSum=3.142;DP=691;FS=0.000;HRun=0;HaplotypeScore=357.4755;InbreedingCoeff=0.6833;MQ=50.08;MQ0=3;MQRankSum=-7.666;QD=39.31;ReadPosRankSum=-2.511;VQSLOD=1.9964;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:35:5.95:453,6,0	0/0:13,0:15:36.12:0,36,1810	0/0:27,0:12:18.02:0,18,392	0/0:20,0:12:5.41:0,5,178	1/1:23,0:22:1.51:68,2,0	1/1:23,0:24:12.04:767,12,0	1/1:42,0:42:49.81:3316,50,0	1/1:25,0:21:10.54:882,11,0	1/1:21,5:26:21.07:1611,21,0	0/0:24,0:27:54.18:0,54,2477	0/0:12,0:14:36.12:0,36,1904	1/1:28,0:28:21.04:1215,21,0	1/1:26,0:25:27.56:1942,28,0	1/1:25,0:25:15.52:613,16,0	1/1:34,0:36:21.06:1309,21,0	0/0:29,0:30:66.23:0,66,3073	1/1:24,0:26:43.69:2574,44,0	1/1:17,0:18:21.07:1383,21,0	1/1:12,0:12:9.03:295,9,0	1/1:15,0:15:2.96:42,3,0	1/1:34,0:32:11.71:311,12,0	1/1:16,0:18:5.84:159,6,0	1/1:18,0:18:8.55:128,9,0	1/1:28,1:33:18.97:1467,19,0	1/1:17,0:20:2.89:247,3,0	0/1:35,0:30:99:1932,0,131	1/1:25,0:26:15.05:803,15,0	1/1:3,0:4:6.02:417,6,0
chr10	109582101	.	C	CG	2613.16	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-6.974;DP=554;FS=2.212;HRun=2;HaplotypeScore=58.4935;InbreedingCoeff=0.9379;MQ=58.51;MQ0=15;MQRankSum=-1.493;QD=29.36;ReadPosRankSum=1.044;VQSLOD=3.2230;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:76.37:0,76,895	0/0:6,0:6:18.01:0,18,205	0/0:13,0:7:0.90:0,1,111	0/0:11,0:10:13.13:0,13,123	1/1:2,15:17:42.06:576,42,0	1/1:0,17:17:39.09:536,39,0	1/1:2,17:17:39.13:558,39,0	0/0:20,0:18:48.12:0,48,577	1/1:1,19:20:39.13:559,39,0	0/0:22,0:22:57.17:0,57,687	0/0:10,0:10:24.02:0,24,269	0/0:28,0:28:84.21:0,84,986	0/0:18,0:17:45.07:0,45,514	0/0:27,0:26:71.93:0,72,828	0/0:21,0:21:57.08:0,57,675	0/0:19,0:18:54.17:0,54,664	0/0:40,0:38:96.38:0,96,1253	0/0:21,0:21:50.62:0,51,579	0/0:21,0:20:41.20:0,41,573	0/0:9,0:8:21.06:0,21,248	0/0:24,0:24:65.74:0,66,749	0/0:14,0:13:36.10:0,36,432	0/0:18,0:18:45.06:0,45,534	0/0:30,0:30:89.32:0,89,994	1/1:1,15:15:39.13:559,39,0	0/0:25,0:24:69.15:0,69,809	0/0:29,0:28:75.22:0,75,912	0/0:7,0:7:21.07:0,21,258
chr10	109582320	.	A	AT	2281.47	PASS	AB=0.758;AC=14;AF=0.250;AN=56;BaseQRankSum=-6.573;DP=603;FS=5.491;HRun=10;HaplotypeScore=70.3429;InbreedingCoeff=0.7895;MQ=77.44;MQ0=9;MQRankSum=-0.216;QD=14.00;ReadPosRankSum=0.283;VQSLOD=3.7764;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:40:99:0,107,864	0/0:6,0:6:17.98:0,18,148	0/0:56,0:30:1.91:0,2,202	0/1:57,1:29:21.36:21,0,74	0/0:22,1:23:30.94:0,31,456	0/0:19,0:19:50.94:0,51,419	0/0:23,0:23:24.88:0,25,405	0/0:30,0:30:65.86:0,66,539	0/0:13,0:13:29.96:0,30,246	0/0:18,0:18:44.94:0,45,369	0/0:14,0:14:29.86:0,30,238	1/1:4,14:18:39.10:416,39,0	1/1:2,13:15:36.09:384,36,0	1/1:4,15:19:39.10:415,39,0	1/1:2,10:12:27.07:288,27,0	0/0:12,0:12:32.96:0,33,271	0/0:25,0:25:69.79:0,70,564	0/0:26,0:26:59.87:0,60,487	0/0:19,1:21:17.97:0,18,341	0/0:18,0:18:38.93:0,39,318	0/0:12,0:12:26.97:0,27,222	1/1:1,10:12:30.07:319,30,0	1/1:1,11:12:27.07:288,27,0	0/1:2,14:16:7.18:342,0,7	0/0:22,0:22:65.92:0,66,542	0/0:29,0:29:64.95:0,65,523	0/0:21,0:22:61.96:0,62,498	0/0:10,0:10:29.97:0,30,246
chr10	109583200	.	A	AG	10344.10	PASS	AB=1.000;AC=55;AF=0.982;AN=56;BaseQRankSum=0.337;DP=600;FS=11.427;HRun=4;HaplotypeScore=231.0408;InbreedingCoeff=-0.0260;MQ=79.59;MQ0=0;MQRankSum=-2.219;QD=17.24;ReadPosRankSum=4.771;VQSLOD=2.3084;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:44,0:44:99:778,101,0	1/1:9,0:9:23.77:167,24,0	1/1:18,0:18:40.70:248,41,0	0/1:22,0:20:43.93:162,0,44	1/1:21,0:21:59.70:488,60,0	1/1:21,1:22:62.65:497,63,0	1/1:25,0:25:59.38:426,59,0	1/1:28,0:28:54.79:427,55,0	1/1:21,0:21:56.46:409,56,0	1/1:24,1:25:65.37:476,65,0	1/1:7,0:7:14.70:91,15,0	1/1:28,0:28:66.50:529,66,0	1/1:21,0:21:56.69:446,57,0	1/1:31,0:31:47.03:517,47,0	1/1:21,0:21:59.55:464,60,0	1/1:34,0:33:55.44:516,55,0	1/1:20,0:19:47.60:354,48,0	1/1:22,0:22:50.60:371,51,0	1/1:22,0:22:53.42:384,53,0	1/1:17,1:18:47.72:367,48,0	1/1:20,0:20:19.14:275,19,0	1/1:15,1:16:21.93:293,22,0	1/1:16,0:16:5.35:180,5,0	1/1:22,0:22:50.55:383,51,0	1/1:12,0:12:24.96:171,25,0	1/1:32,0:32:58.63:541,59,0	1/1:18,0:19:44.68:337,45,0	1/1:4,0:4:7.99:49,8,0
chr10	109583251	.	T	TCCAGGAGCTCAGCA	60210.15	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-10.086;DP=509;FS=10.116;HRun=0;HaplotypeScore=196.8301;InbreedingCoeff=0.9902;MQ=85.44;MQ0=0;MQRankSum=-15.268;QD=154.78;ReadPosRankSum=5.301;VQSLOD=4.5242;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,15:24:54.17:3439,54,0	0/0:7,0:7:20.79:0,21,629	0/0:25,0:25:72.24:0,72,2483	0/0:22,0:22:66.18:0,66,2058	1/1:5,11:19:27.09:1772,27,0	1/1:3,12:15:45.15:3191,45,0	1/1:12,11:23:63.20:3896,63,0	1/1:18,2:21:54.17:3310,54,0	1/1:6,13:24:54.64:3557,55,0	0/0:24,0:24:72.25:0,72,2864	0/0:12,0:12:36.12:0,36,1497	1/1:10,14:26:63.22:4221,63,0	1/1:11,11:23:66.20:4130,66,0	1/1:5,15:22:60.21:4267,60,0	1/1:8,12:21:63.22:4087,63,0	0/0:30,0:30:78.27:0,78,3181	1/1:7,7:13:30.02:1579,30,0	1/1:10,6:16:42.12:2591,42,0	1/1:5,6:11:30.10:1739,30,0	1/1:3,8:11:30.10:2150,30,0	1/1:9,11:20:27.09:1036,27,0	1/1:5,10:16:33.11:2226,33,0	1/1:6,6:13:18.06:1165,18,0	1/1:6,2:8:15.05:1077,15,0	1/1:6,9:16:30.10:1994,30,0	1/1:7,12:19:57.20:3724,57,0	1/1:2,19:21:60.19:4126,60,0	1/1:2,3:6:15.05:933,15,0
chr10	109584997	.	T	TCC	6197.82	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=7.352;DP=595;FS=2.561;HRun=7;HaplotypeScore=104.4318;InbreedingCoeff=0.9697;MQ=84.07;MQ0=0;MQRankSum=-4.798;QD=16.80;ReadPosRankSum=2.843;VQSLOD=2.2626;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,18:25:27.05:412,27,0	0/0:6,0:6:9.02:0,9,105	0/0:21,0:20:46:0,46,512	0/0:20,0:20:45.03:0,45,486	0/0:23,0:23:48.04:0,48,543	0/0:24,0:24:63.17:0,63,724	0/0:27,0:27:72.20:0,72,834	1/1:5,13:18:39.06:558,39,0	0/0:11,0:11:33.10:0,33,384	0/0:19,0:19:42.08:0,42,475	0/0:19,0:19:54.15:0,54,616	1/1:2,0:27:52.28:184,52,0	1/1:2,0:28:52.40:185,52,0	1/1:6,0:34:47.13:167,47,0	1/1:3,0:28:47.25:166,47,0	0/0:35,0:35:96.28:0,96,1117	1/1:2,21:25:51.16:800,51,0	1/1:4,20:24:45.15:711,45,0	1/1:2,9:12:30.05:426,30,0	1/1:2,5:8:14.96:177,15,0	1/1:6,26:35:50.66:785,51,0	1/1:8,0:10:6.10:34,6,0	1/1:2,0:12:14.85:52,15,0	1/1:5,0:31:62.14:220,62,0	0/0:21,0:21:48.11:0,48,542	1/1:8,9:17:32.58:475,33,0	1/1:5,16:23:38.41:599,38,0	1/1:4,8:12:15.05:246,15,0
chr10	109585712	.	G	GGT	2035.39	PASS	AB=0.925;AC=29;AF=0.537;AN=54;BaseQRankSum=-0.854;DP=714;FS=22.990;HRun=0;HaplotypeScore=157.7838;InbreedingCoeff=0.1175;MQ=58.41;MQ0=22;MQRankSum=-0.978;QD=3.86;ReadPosRankSum=-3.387;VQSLOD=0.0690;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:26:6.37:17,0,6	0/0:8,0:8:12.02:0,12,125	1/1:19,0:11:1.55:4,2,0	./.	0/1:18,3:21:26.20:161,0,26	1/1:20,7:26:13.20:377,13,0	0/1:28,1:28:49.04:235,0,49	1/1:32,0:30:9.81:57,10,0	0/1:11,19:30:12.45:232,0,12	0/0:39,0:40:31.03:0,31,500	0/0:11,0:10:3.01:0,3,33	0/1:44,0:42:63.04:74,0,63	0/1:23,0:21:15.79:53,0,16	0/1:24,0:23:0.61:1,0,25	0/0:43,0:41:8.94:0,9,102	0/1:26,0:28:1.70:2,0,361	0/1:23,0:23:12.51:37,0,13	1/1:19,0:17:9.05:50,9,0	1/1:16,0:13:7.19:37,7,0	1/1:15,0:14:5.80:43,6,0	1/1:49,0:48:15.31:171,15,0	0/0:25,0:22:4.25:0,4,105	0/0:15,0:15:8.69:0,9,54	0/0:22,0:21:1.49:0,1,33	0/1:11,5:15:6.80:277,0,7	1/1:38,0:34:22.62:251,23,0	0/1:35,0:35:4.21:99,0,4	1/1:8,0:8:5.59:21,6,0
chr10	109585743	.	GTGTA	G	1332.58	PASS	AB=0.991;AC=20;AF=0.370;AN=54;BaseQRankSum=3.544;DP=890;FS=73.502;HRun=0;HaplotypeScore=168.3399;InbreedingCoeff=-0.4846;MQ=42.83;MQ0=98;MQRankSum=0.531;QD=1.95;ReadPosRankSum=-2.440;VQSLOD=-0.5803;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,1:26:64.12:69,0,64	0/0:12,0:11:23.75:0,24,299	1/1:4,0:2:1.82:5,2,0	./.	0/1:17,0:14:13.33:13,0,158	0/1:27,0:24:20.33:20,0,391	0/1:41,0:30:25.45:25,0,247	0/1:68,0:22:16.10:16,0,139	0/0:32,0:29:36.02:0,36,490	0/1:54,0:46:8.41:8,0,1390	0/0:18,0:16:32.95:0,33,394	0/1:48,1:43:99:134,0,259	0/0:34,0:32:5.08:0,5,390	0/1:26,0:23:64.83:65,0,100	0/1:48,0:44:99:106,0,288	0/0:39,0:37:49.71:0,50,1191	0/1:26,1:25:99:117,0,184	0/1:24,0:20:99:139,0,110	0/1:27,0:15:13.21:13,0,237	0/1:21,0:17:72.37:72,0,135	0/1:79,0:65:99:250,0,641	0/0:23,0:17:5.38:0,5,169	0/0:22,0:21:27.84:0,28,334	0/1:36,0:33:12.34:12,0,247	0/0:19,0:17:32.89:0,33,456	0/1:55,1:47:99:101,0,913	0/1:31,2:32:99:272,0,229	0/1:16,0:15:47.71:48,0,169
chr10	109585841	.	A	ATGTG	4683.12	PASS	AB=0.884;AC=16;AF=0.296;AN=54;BaseQRankSum=-0.876;DP=893;FS=8.213;HRun=0;HaplotypeScore=173.5470;InbreedingCoeff=0.6383;MQ=46.97;MQ0=44;MQRankSum=-8.406;QD=14.32;ReadPosRankSum=-3.279;VQSLOD=3.0934;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,9:22:24.02:371,24,0	0/0:16,0:16:42.13:0,42,741	./.	0/0:31,0:4:11.53:0,12,174	0/0:25,0:23:54.15:0,54,909	0/0:31,0:31:57.16:0,57,979	0/0:25,0:24:19.74:0,20,502	0/1:38,0:27:50.51:401,0,51	0/0:30,0:30:66.15:0,66,1187	0/0:45,0:43:35.53:0,36,1624	0/0:35,0:35:87.30:0,87,1568	0/0:42,0:39:87.72:0,88,1508	0/0:27,0:27:51.16:0,51,898	0/0:34,0:32:63.63:0,64,1003	0/0:47,0:46:67.93:0,68,1526	0/0:36,0:34:85.13:0,85,1454	1/1:11,1:12:10.21:269,10,0	0/1:11,4:13:8.42:316,0,8	1/1:18,4:11:20.96:413,21,0	1/1:19,14:29:21.03:377,21,0	0/1:70,1:55:73.86:243,0,74	0/0:29,0:29:51.12:0,51,845	0/0:32,0:31:60.19:0,60,1046	0/0:31,0:31:42.60:0,43,743	0/0:24,0:24:63.17:0,63,1059	0/1:39,18:47:99:1187,0,284	1/1:22,17:35:39.09:741,39,0	1/1:8,6:13:15.94:366,16,0
chr10	109585873	.	A	ATG	11092.98	PASS	AB=0.795;AC=31;AF=0.574;AN=54;BaseQRankSum=-0.375;DP=959;FS=10.001;HRun=0;HaplotypeScore=153.0058;InbreedingCoeff=0.7397;MQ=46.89;MQ0=73;MQRankSum=-1.395;QD=17.28;ReadPosRankSum=0.818;VQSLOD=4.6448;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,24:33:24.53:381,25,0	0/0:16,0:16:36.12:0,36,466	./.	0/0:20,0:4:2.94:0,3,18	0/0:25,0:23:57.13:0,57,683	0/0:29,0:29:45.13:0,45,565	0/0:23,1:19:11.48:0,11,140	0/1:99,10:27:31.27:559,0,31	0/0:31,0:31:57.15:0,57,695	0/0:60,0:49:99:0,126,1564	0/0:38,0:38:99:0,99,1275	1/1:9,27:35:78.26:1296,78,0	1/1:7,23:32:48.16:816,48,0	1/1:7,17:22:29.72:509,30,0	1/1:10,33:42:63.13:1069,63,0	0/0:36,0:35:67.14:0,67,929	1/1:5,16:18:23.72:408,24,0	1/1:5,17:21:22.54:564,23,0	1/1:19,11:15:35.61:536,36,0	1/1:7,20:25:21.06:331,21,0	0/1:47,16:50:92.51:231,0,93	1/1:3,20:24:24.55:406,25,0	1/1:2,32:33:63.22:1069,63,0	1/1:9,20:30:39.13:663,39,0	0/0:32,0:31:78.25:0,78,995	0/1:24,24:39:22.12:961,0,22	1/1:8,31:38:51.16:813,51,0	1/1:1,16:16:30.10:481,30,0
chr10	109585891	.	A	ATG	2758.35	PASS	AB=0.844;AC=11;AF=0.196;AN=56;BaseQRankSum=-9.793;DP=954;FS=2.992;HRun=0;HaplotypeScore=170.2517;InbreedingCoeff=0.6400;MQ=48.56;MQ0=69;MQRankSum=2.275;QD=15.67;ReadPosRankSum=2.964;VQSLOD=3.8950;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:34:4.07:4,0,434	0/0:14,0:14:33.10:0,33,412	0/1:7,0:2:16.84:18,0,17	0/0:5,0:1:3.01:0,3,38	1/1:5,18:21:39.13:644,39,0	0/1:3,22:26:7.41:416,0,7	1/1:10,8:16:9.03:146,9,0	0/0:125,0:45:78.68:0,79,926	1/1:7,22:29:17.17:619,17,0	0/0:57,0:48:99:0,113,1403	0/0:43,0:43:93.28:0,93,1143	0/0:41,0:40:84.12:0,84,992	0/0:32,0:31:54.16:0,54,651	0/0:20,0:18:32.97:0,33,384	0/0:43,0:42:65.73:0,66,786	0/0:33,0:33:71.10:0,71,884	0/0:22,0:19:26.77:0,27,332	0/0:23,0:21:5.51:0,6,436	0/0:37,0:18:14.97:0,15,432	0/0:23,0:20:20.96:0,21,260	0/0:57,0:43:30.05:0,30,340	0/0:29,0:28:38.71:0,39,459	0/0:30,0:29:56.72:0,57,684	0/0:31,0:33:41.85:0,42,484	1/1:8,28:35:66.22:1076,66,0	0/0:49,0:39:84.11:0,84,949	0/0:39,0:37:44.23:0,44,439	0/0:18,0:17:29.99:0,30,305
chr10	109585897	.	G	GTA	1174.88	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=1.591;DP=959;FS=4.541;HRun=0;HaplotypeScore=172.5138;InbreedingCoeff=0.2286;MQ=49.90;MQ0=66;MQRankSum=5.095;QD=7.99;ReadPosRankSum=5.757;VQSLOD=3.0319;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:45.79:0,46,647	0/0:13,0:13:36.11:0,36,527	0/1:11,0:4:17.73:18,0,90	0/0:8,0:4:9:0,9,113	0/1:24,0:21:3.94:280,0,4	0/1:26,0:26:54.75:191,0,55	0/1:20,0:16:35.09:56,0,35	0/0:122,0:50:99:0,117,1491	0/1:35,0:34:99:265,0,146	0/0:61,0:52:99:0,113,1943	0/0:44,0:44:99:0,123,1657	0/0:41,0:40:99:0,102,1413	0/0:33,0:32:60.17:0,60,871	0/0:22,0:20:39.09:0,39,543	0/0:42,0:41:87.41:0,87,1162	0/0:36,0:35:84.60:0,85,1180	0/0:23,0:20:30.73:0,31,439	0/0:23,1:22:23.99:0,24,575	0/0:35,1:18:3.53:0,4,601	0/0:24,0:21:29.95:0,30,393	0/0:47,5:41:32.99:0,33,424	0/0:27,0:26:44.82:0,45,633	0/0:31,0:30:74.67:0,75,999	0/0:32,0:33:50.90:0,51,705	1/1:31,0:30:44.70:501,45,0	0/0:49,0:39:93.23:0,93,1316	0/0:36,0:33:45.14:0,45,638	0/0:16,0:15:30.10:0,30,438
chr10	109589222	.	G	GC	28713.79	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-1.241;DP=794;FS=9.668;HRun=0;HaplotypeScore=92.9323;InbreedingCoeff=0.9989;MQ=84.18;MQ0=0;MQRankSum=-6.077;QD=43.11;ReadPosRankSum=4.839;VQSLOD=4.6504;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,62:62:99:2686,169,0	0/0:9,0:9:27.07:0,27,358	0/0:22,0:22:34.46:0,34,771	0/0:26,0:26:72.20:0,72,941	1/1:1,25:25:66.23:1055,66,0	1/1:0,17:16:51.17:815,51,0	1/1:2,33:35:90.31:1439,90,0	1/1:1,26:27:75.26:1191,75,0	1/1:4,30:34:87.30:1391,87,0	0/0:22,1:23:21.24:0,21,866	0/0:18,0:18:42.10:0,42,571	1/1:0,37:37:99:1727,108,0	1/1:0,23:23:57.19:911,57,0	1/1:1,25:26:66.23:1055,66,0	1/1:1,32:33:90.31:1439,90,0	0/0:30,0:30:90.27:0,90,1239	1/1:1,48:49:99:2062,129,0	1/1:0,24:24:69.24:1103,69,0	1/1:0,19:19:57.19:911,57,0	1/1:2,14:16:39.13:623,39,0	1/1:2,61:63:99:2637,166,0	1/1:1,33:34:93.32:1486,93,0	1/1:0,22:22:54.18:863,54,0	1/1:0,38:38:99:1631,102,0	1/1:0,13:13:39.13:624,39,0	1/1:0,27:27:81.28:1295,81,0	1/1:1,26:27:78.27:1245,78,0	1/1:1,13:14:33.11:522,33,0
chr10	109589411	.	T	TG	5689.71	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-12.513;DP=658;FS=14.645;HRun=5;HaplotypeScore=74.5606;InbreedingCoeff=0.9983;MQ=78.78;MQ0=0;MQRankSum=-0.557;QD=36.01;ReadPosRankSum=2.268;VQSLOD=3.3361;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,150,1601	0/0:6,0:6:18.05:0,18,193	0/0:20,0:20:45.05:0,45,464	0/0:21,0:21:50.75:0,51,503	0/0:28,0:28:75.17:0,75,797	0/0:14,0:14:42.09:0,42,443	0/0:18,0:18:42.10:0,42,451	0/0:16,0:16:36.09:0,36,387	0/0:28,0:28:75.19:0,75,805	0/0:21,0:21:42.09:0,42,451	0/0:20,0:20:51.11:0,51,540	1/1:3,31:34:96.30:1250,96,0	1/1:1,21:22:63.16:809,63,0	1/1:2,25:27:75.24:987,75,0	1/1:1,23:24:63.20:829,63,0	0/0:29,0:29:78.16:0,78,821	0/0:38,0:38:99:0,99,1050	0/0:27,0:27:69.17:0,69,741	0/0:20,0:20:57.13:0,57,601	0/0:16,0:16:45.10:0,45,474	0/0:35,0:35:84.20:0,84,903	1/1:0,10:10:27.09:355,27,0	1/1:0,16:16:45.15:591,45,0	1/1:1,24:25:66.21:868,66,0	0/0:21,0:21:57.12:0,57,602	0/0:26,0:26:72.16:0,72,764	0/0:25,0:25:69.17:0,69,741	0/0:15,0:15:42.10:0,42,448
chr10	109589639	.	T	TA	4850.79	PASS	AB=0.658;AC=19;AF=0.339;AN=56;BaseQRankSum=6.686;DP=519;FS=12.087;HRun=3;HaplotypeScore=155.1528;InbreedingCoeff=0.9067;MQ=52.15;MQ0=6;MQRankSum=-6.379;QD=22.15;ReadPosRankSum=0.758;VQSLOD=3.1954;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,22:32:70.96:948,71,0	0/0:11,0:11:30.09:0,30,360	0/0:9,0:4:9.03:0,9,107	0/0:11,0:8:17.81:0,18,159	0/0:25,0:25:63.14:0,63,696	0/0:14,0:13:32.65:0,33,365	0/0:13,0:13:22.61:0,23,239	1/1:10,13:20:47.98:536,48,0	0/0:18,0:18:36.08:0,36,392	0/0:28,0:28:78.14:0,78,899	0/0:16,0:16:42.09:0,42,487	0/0:24,0:24:62.28:0,62,562	0/0:20,0:20:44.74:0,45,436	0/0:15,0:15:26.64:0,27,228	0/0:13,0:13:23.61:0,24,178	0/0:14,0:14:39.11:0,39,458	1/1:10,16:29:46.47:666,46,0	1/1:11,10:22:45.61:534,46,0	1/1:9,8:13:23.11:307,23,0	1/1:4,8:16:39.25:428,39,0	1/1:6,3:8:14.71:191,15,0	0/0:11,0:11:23.76:0,24,215	0/0:21,0:21:47.47:0,47,456	0/0:13,0:12:29.82:0,30,301	0/0:23,0:23:49.68:0,50,523	0/1:12,11:25:19.22:485,0,19	1/1:17,9:31:34.68:543,35,0	1/1:5,3:12:26.67:212,27,0
chr10	109589676	.	A	AAAGAAAG	11038.43	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=6.113;DP=611;FS=21.381;HRun=0;HaplotypeScore=197.8426;InbreedingCoeff=0.8738;MQ=72.27;MQ0=10;MQRankSum=-8.492;QD=24.69;ReadPosRankSum=5.157;VQSLOD=2.5583;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:28:54.51:715,55,0	0/0:10,0:10:27.09:0,27,631	0/0:53,0:27:52.67:0,53,624	0/0:52,0:23:23.66:0,24,306	1/1:4,0:27:51.64:531,52,0	1/1:15,0:20:50.94:597,51,0	1/1:3,0:20:18.03:216,18,0	1/1:30,0:28:60.16:639,60,0	1/1:2,0:14:15.03:163,15,0	0/0:22,0:22:57.17:0,57,1298	0/0:14,0:14:42.12:0,42,777	1/1:1,23:27:30.10:1146,30,0	1/1:2,14:19:12.45:552,12,0	1/1:0,13:17:15.05:573,15,0	1/1:0,15:16:15.05:573,15,0	0/0:13,0:13:39.11:0,39,785	1/1:23,0:23:46.18:512,46,0	1/1:21,0:21:39.74:296,40,0	1/1:14,0:13:13.84:118,14,0	1/1:15,0:15:33.79:483,34,0	1/1:14,0:14:26.16:169,26,0	1/1:0,8:8:15.04:416,15,0	1/1:1,15:17:21.04:708,21,0	1/1:2,6:12:15.04:431,15,0	1/1:3,0:32:39.05:401,39,0	0/1:25,0:25:25.66:425,0,26	1/1:34,0:32:73.10:964,73,0	1/1:12,0:12:28.67:410,29,0
chr10	109589678	.	A	AG	7420.88	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=7.725;DP=603;FS=17.875;HRun=0;HaplotypeScore=159.8071;InbreedingCoeff=0.4608;MQ=73.82;MQ0=10;MQRankSum=-9.406;QD=16.94;ReadPosRankSum=4.386;VQSLOD=5.1651;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,19:28:80.88:845,81,0	0/0:9,0:9:27.08:0,27,363	0/0:55,0:29:53.53:0,54,614	0/0:52,0:23:21.03:0,21,337	0/1:26,0:26:97.89:98,0,111	0/1:22,0:21:63.29:63,0,181	0/1:18,0:18:35.36:35,0,38	1/1:3,26:27:75.94:816,76,0	0/1:12,0:12:9.57:52,0,10	0/0:22,0:22:63.15:0,63,817	0/0:14,0:14:42.12:0,42,554	1/1:26,0:26:26.05:105,26,0	1/1:15,0:15:13.16:50,13,0	1/1:16,0:16:13.15:53,13,0	1/1:15,0:15:13.15:53,13,0	0/0:13,0:13:35.89:0,36,449	1/1:2,17:22:60.05:692,60,0	1/1:1,19:21:57.18:703,57,0	1/1:2,13:14:42.08:473,42,0	1/1:1,10:15:42.02:434,42,0	1/1:1,13:14:36.07:427,36,0	0/1:9,0:9:11.18:24,0,11	1/1:16,0:16:13.78:60,14,0	0/1:11,0:11:3.68:32,0,4	0/1:31,0:31:32.13:98,0,32	1/1:1,23:26:33.34:812,33,0	1/1:1,28:34:93.17:1083,93,0	1/1:0,11:14:36.09:415,36,0
chr10	109589820	.	C	CTG	4237.17	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.911;DP=605;FS=4.272;HRun=0;HaplotypeScore=83.6755;InbreedingCoeff=0.9973;MQ=79.82;MQ0=0;MQRankSum=2.389;QD=49.85;ReadPosRankSum=-0.329;VQSLOD=5.2103;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.22:0,63,1020	0/0:10,0:10:27.09:0,27,440	0/0:16,0:16:45.11:0,45,639	0/0:23,0:23:62.58:0,63,996	1/1:0,13:14:36.12:731,36,0	1/1:1,25:26:72.25:1435,72,0	1/1:1,19:20:51.17:1037,51,0	0/0:34,0:34:99:0,99,1561	1/1:0,10:11:24.08:486,24,0	0/0:32,0:32:93.32:0,93,1517	0/0:16,0:16:48.06:0,48,700	0/0:29,0:29:81.22:0,81,1257	0/0:13,0:13:36.12:0,36,580	0/0:27,0:27:78.25:0,78,1245	0/0:19,0:19:57.19:0,57,926	0/0:22,0:22:66.23:0,66,1067	0/0:28,0:28:81.28:0,81,1318	0/0:26,0:26:78.22:0,78,1234	0/0:38,0:38:99:0,108,1719	0/0:10,0:10:27.09:0,27,440	0/0:39,0:39:99:0,117,1904	0/0:8,0:8:21.03:0,21,313	0/0:15,0:15:45.11:0,45,705	0/0:24,0:24:69.24:0,69,1126	1/1:0,12:14:27.09:548,27,0	0/0:29,0:29:87.30:0,87,1416	0/0:32,0:32:90.31:0,90,1467	0/0:8,0:8:24.08:0,24,387
chr10	109590417	.	T	TCTGTGGTCCCCTAGCC	25160.11	PASS	AB=0.870;AC=19;AF=0.339;AN=56;BaseQRankSum=-3.642;DP=584;FS=24.377;HRun=0;HaplotypeScore=236.5985;InbreedingCoeff=0.8993;MQ=81.76;MQ0=0;MQRankSum=-12.489;QD=118.68;ReadPosRankSum=-2.902;VQSLOD=3.0827;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,7:31:69.24:4536,69,0	0/0:5,0:5:15.01:0,15,571	0/0:27,0:26:71.98:0,72,2164	0/0:23,0:22:39.60:0,40,1443	0/0:10,0:10:23.98:0,24,819	0/0:27,0:27:75.26:0,75,3304	0/0:26,0:26:75.26:0,75,2963	1/1:33,0:33:81.22:3786,81,0	0/0:23,0:23:66.23:0,66,2593	0/0:20,0:20:54.17:0,54,2121	0/0:14,0:14:30.09:0,30,1092	0/0:26,0:26:57.20:0,57,2191	0/0:20,0:20:48.15:0,48,1785	0/0:31,0:31:81.28:0,81,3385	0/0:33,0:33:84.29:0,84,3626	0/0:27,0:27:69.24:0,69,3084	1/1:13,6:20:39.09:2235,39,0	1/1:5,5:14:30.10:2185,30,0	1/1:11,6:21:51.07:2024,51,0	1/1:6,4:13:29.72:1691,30,0	1/1:34,4:44:63:3311,63,0	0/0:18,0:17:39.12:0,39,1370	0/0:9,0:9:18.06:0,18,645	0/0:22,0:22:63.19:0,63,2550	0/0:11,0:11:24.07:0,24,838	0/1:17,2:20:80.47:2861,0,80	1/1:6,4:12:27.09:2087,27,0	1/1:3,1:4:6.02:444,6,0
chr10	109590495	.	CTCGG	C	7028.51	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=2.703;DP=631;FS=0.763;HRun=0;HaplotypeScore=138.9937;InbreedingCoeff=0.9994;MQ=88.68;MQ0=0;MQRankSum=-3.551;QD=49.15;ReadPosRankSum=2.030;VQSLOD=5.7016;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,111,2102	0/0:16,0:16:48.16:0,48,1312	0/0:25,0:25:71.82:0,72,1740	0/0:29,0:29:75.21:0,75,1835	0/0:13,0:13:39.09:0,39,988	0/0:30,0:29:87.21:0,87,2256	0/0:27,0:27:72.25:0,72,1971	0/0:31,0:31:65.37:0,65,1553	0/0:20,0:20:60.21:0,60,1623	0/0:26,0:26:66.21:0,66,1750	0/0:13,0:13:36.08:0,36,903	1/1:0,29:29:75.26:1452,75,0	1/1:0,17:17:45.15:871,45,0	1/1:0,26:26:75.26:1452,75,0	1/1:1,25:26:69.24:1337,69,0	0/0:29,0:29:78.27:0,78,2119	0/0:23,0:23:60.21:0,60,1135	0/0:13,0:13:33.11:0,33,613	0/0:22,0:22:38.21:0,38,1027	0/0:18,0:18:48.16:0,48,903	0/0:40,0:40:68.34:0,68,1659	1/1:0,20:19:45.15:870,45,0	1/1:0,11:11:30.10:581,30,0	1/1:1,13:14:24.08:466,24,0	0/0:16,0:16:42.14:0,42,1104	0/0:27,0:26:78.22:0,78,1403	0/0:14,0:14:36.12:0,36,684	0/0:11,0:11:33.11:0,33,626
chr10	109591368	.	T	TG	11740.99	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=1.100;DP=696;FS=3.765;HRun=0;HaplotypeScore=90.5604;InbreedingCoeff=0.9991;MQ=87.68;MQ0=0;MQRankSum=-1.548;QD=43.81;ReadPosRankSum=0.442;VQSLOD=5.0418;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:34:93.30:1463,93,0	0/0:18,0:18:54.15:0,54,729	0/0:24,0:24:66.19:0,66,902	0/0:24,0:24:66.65:0,67,895	0/0:29,0:29:84.28:0,84,1169	0/0:29,0:29:84.26:0,84,1155	0/0:27,0:27:81.24:0,81,1093	1/1:0,26:26:78.25:1218,78,0	0/0:20,0:20:60.19:0,60,821	0/0:25,0:25:19.67:0,20,790	0/0:18,0:18:51.15:0,51,683	0/0:23,0:23:63.21:0,63,880	0/0:28,0:28:84.28:0,84,1171	0/0:26,0:26:75.25:0,75,1048	0/0:31,0:31:93.30:0,93,1283	0/0:27,0:27:75.25:0,75,1047	1/1:0,29:29:75.26:1199,75,0	1/1:0,21:21:60.20:959,60,0	1/1:0,25:25:75.23:1154,75,0	1/1:2,16:18:45.15:719,45,0	1/1:0,37:37:99:1679,105,0	0/0:20,0:20:57.16:0,57,762	0/0:13,0:13:36.12:0,36,503	0/0:30,0:30:90.26:0,90,1237	0/0:16,0:16:48.16:0,48,667	1/1:1,25:26:72.25:1148,72,0	1/1:1,31:32:90.31:1435,90,0	1/1:0,20:20:48.16:767,48,0
chr10	109592980	.	CTCTCTCTG	C	705.93	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=3.095;DP=560;FS=9.339;HRun=0;HaplotypeScore=174.6154;InbreedingCoeff=0.8409;MQ=57.52;MQ0=13;MQRankSum=-1.756;QD=8.02;ReadPosRankSum=-1.892;VQSLOD=1.8376;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:18.06:0,18,525	0/0:13,0:13:33.11:0,33,1188	0/0:20,0:9:6.02:0,6,102	0/0:26,0:18:14.10:0,14,352	0/0:20,0:20:48.16:0,48,1777	0/0:28,0:28:60.18:0,60,2041	0/0:20,0:20:36.12:0,36,922	0/0:30,0:28:60.19:0,60,1494	0/0:20,0:20:42.14:0,42,1204	0/0:25,0:25:60.20:0,60,1982	0/0:24,0:24:60.20:0,60,1807	1/1:11,5:16:18.06:289,18,0	1/1:2,23:25:11.68:305,12,0	1/1:3,12:15:3.01:79,3,0	./.	0/0:30,0:30:87.30:0,87,2861	0/0:19,0:19:30.56:0,31,803	0/0:15,0:15:33.09:0,33,977	0/0:17,0:15:25.49:0,25,480	0/0:19,0:19:30.08:0,30,946	0/0:18,0:18:21.06:0,21,678	./.	1/1:4,16:20:3.01:79,3,0	1/1:10,2:12:6.02:99,6,0	0/0:12,0:12:33.11:0,33,1376	0/0:21,0:21:49.71:0,50,1137	0/0:11,0:11:26.47:0,26,713	0/0:11,0:11:26.21:0,26,726
chr10	109592990	.	CTCTCTGTCTCTGTCTCTCTA	C	2368.13	PASS	AB=1.000;AC=13;AF=0.271;AN=48;BaseQRankSum=6.453;DP=573;FS=3.614;HRun=0;HaplotypeScore=260.0929;InbreedingCoeff=0.6270;MQ=54.66;MQ0=16;MQRankSum=-6.697;QD=16.68;ReadPosRankSum=0.167;VQSLOD=2.1685;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:14,0:14:30.09:0,30,964	0/0:19,0:4:3.01:0,3,70	0/0:36,0:17:10.39:0,10,250	0/0:24,0:24:42.14:0,42,1878	0/0:29,0:29:36.09:0,36,1693	0/0:20,0:20:24.07:0,24,853	1/1:27,0:24:2.99:24,3,0	0/0:24,0:24:24.08:0,24,1402	0/0:27,0:27:42.12:0,42,2050	0/0:24,0:24:39.13:0,39,2062	0/0:17,0:17:9.03:0,9,381	0/0:25,0:25:6.46:0,6,142	0/0:16,0:16:3.48:0,3,105	0/0:23,0:23:3.01:0,3,105	0/0:33,0:33:69.22:0,69,3313	1/1:20,0:20:14.45:327,14,0	1/1:15,0:15:8.98:159,9,0	1/1:18,0:15:15.01:453,15,0	./.	0/1:15,0:15:0:0,0,0	./.	./.	0/0:13,0:13:8.99:0,9,365	0/0:15,0:15:30.10:0,30,1153	0/1:23,0:23:53.81:1106,0,54	1/1:14,0:13:15.05:449,15,0	0/1:10,0:10:0:0,0,0
chr10	109593000	.	CTG	C	563.33	PASS	AB=0.839;AC=7;AF=0.125;AN=56;BaseQRankSum=7.417;DP=575;FS=0.769;HRun=0;HaplotypeScore=128.0400;InbreedingCoeff=-0.1400;MQ=53.70;MQ0=15;MQRankSum=-6.741;QD=4.33;ReadPosRankSum=0.219;VQSLOD=2.2780;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,5:17:12.02:0,12,196	0/0:14,0:14:42.14:0,42,801	0/0:25,0:5:10.76:0,11,131	0/0:39,0:14:31.05:0,31,464	0/0:25,0:25:57.18:0,57,1052	0/0:26,0:26:54.15:0,54,965	0/0:23,0:23:41.95:0,42,734	0/0:22,0:18:42.13:0,42,744	0/0:23,0:23:36.12:0,36,684	0/0:28,0:28:81.19:0,81,1401	0/0:24,0:24:66.64:0,67,1140	0/0:13,0:13:9.03:0,9,168	0/1:26,0:26:6.63:7,0,120	0/1:17,0:17:4.02:4,0,52	0/0:25,0:25:9.01:0,9,140	0/0:36,0:36:99:0,105,1938	0/1:11,6:17:99:138,0,282	0/1:9,4:13:89.25:89,0,388	0/0:17,0:13:39.09:0,39,712	0/0:12,1:13:24.07:0,24,414	0/0:11,4:15:17.98:0,18,303	0/0:20,0:20:6.02:0,6,107	0/1:18,0:18:0.05:0,0,36	0/0:13,0:13:9.03:0,9,168	0/0:17,0:17:42.14:0,42,810	0/1:13,11:24:99:345,0,592	0/1:8,7:15:94.78:95,0,394	0/0:9,0:9:7.63:0,8,281
chr10	109593024	.	C	CTG	323.53	PASS	AB=0.887;AC=6;AF=0.111;AN=54;BaseQRankSum=4.192;DP=599;FS=4.981;HRun=0;HaplotypeScore=147.2169;InbreedingCoeff=-0.0265;MQ=54.29;MQ0=13;MQRankSum=-4.400;QD=3.64;ReadPosRankSum=-2.045;VQSLOD=2.3714;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,3:19:6.02:0,6,91	0/0:12,0:12:36.11:0,36,528	0/0:48,0:15:37.67:0,38,555	0/0:55,0:28:45.59:0,46,794	0/0:29,0:29:48.16:0,48,733	0/0:26,0:26:36.09:0,36,507	0/0:24,0:24:45.14:0,45,660	0/0:20,0:19:21.12:0,21,556	0/0:23,0:23:27.09:0,27,410	0/0:28,0:28:84.25:0,84,1225	0/0:21,0:21:63.19:0,63,921	0/0:12,0:12:9.03:0,9,138	0/0:28,0:28:17.25:0,17,229	0/0:18,0:18:2.80:0,3,46	0/0:21,0:21:9.03:0,9,138	0/0:40,0:40:99:0,111,1653	0/1:11,3:14:0.38:0,0,199	0/1:9,0:9:0.05:0,0,211	0/1:9,4:10:99:200,0,124	0/1:12,0:12:0:0,0,0	0/0:10,1:11:1.01:0,1,45	0/0:23,0:23:9.03:0,9,138	0/0:19,0:19:9.03:0,9,138	0/0:15,0:15:9.03:0,9,138	0/0:18,0:18:33.11:0,33,503	0/1:25,4:29:99:176,0,783	0/1:10,2:11:44.98:45,0,208	./.
chr10	109593054	.	ATCTG	A	1729.73	PASS	AB=1.000;AC=19;AF=0.352;AN=54;BaseQRankSum=6.416;DP=565;FS=3.313;HRun=0;HaplotypeScore=128.6946;InbreedingCoeff=0.7054;MQ=53.40;MQ0=8;MQRankSum=-5.089;QD=10.74;ReadPosRankSum=-0.993;VQSLOD=3.2272;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,3:17:3.01:51,3,0	0/0:13,0:13:27.09:0,27,655	0/0:50,0:34:42.21:0,42,1189	0/0:44,0:29:31.11:0,31,670	0/0:26,0:26:11.98:0,12,236	0/0:22,0:21:11.90:0,12,89	0/0:22,0:21:15.26:0,15,146	1/1:11,20:30:52.25:673,52,0	0/0:23,0:23:16.24:0,16,246	0/0:29,0:29:60.19:0,60,1349	0/0:19,0:19:36.04:0,36,634	0/0:16,0:16:9:0,9,99	0/0:30,0:30:24.39:0,24,300	0/0:13,0:13:3.01:0,3,71	0/1:20,0:20:24.01:24,0,151	0/0:39,0:39:99:0,108,2336	1/1:9,2:11:17.59:156,18,0	1/1:4,2:6:8.99:120,9,0	1/1:12,1:11:14.99:189,15,0	1/1:11,3:13:3.01:38,3,0	1/1:9,0:9:2.74:47,3,0	0/0:13,0:13:9.03:0,9,210	0/0:15,0:15:3:0,3,25	0/0:16,0:16:8.34:0,8,115	0/0:14,0:14:4.42:0,4,46	1/1:23,3:26:28.39:430,28,0	1/1:11,3:12:17.55:188,18,0	./.
chr10	109593070	.	G	GTCTCTCTC	1199.16	PASS	AB=0.985;AC=19;AF=0.339;AN=56;BaseQRankSum=3.578;DP=518;FS=2.680;HRun=0;HaplotypeScore=144.8964;InbreedingCoeff=0.6097;MQ=52.40;MQ0=8;MQRankSum=-1.479;QD=6.28;ReadPosRankSum=-4.194;VQSLOD=1.4424;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:3.01:0,3,61	0/0:12,0:12:21.07:0,21,525	0/0:43,0:30:63.12:0,63,1043	0/0:45,0:31:15.66:0,16,547	0/1:20,0:21:0:0,0,0	1/1:20,0:21:6.02:102,6,0	1/1:16,0:18:10.93:97,11,0	0/0:28,0:26:39.73:0,40,527	0/1:23,0:23:21.72:22,0,142	0/0:38,0:38:99:0,99,1977	0/0:14,0:14:21.07:0,21,486	1/1:5,9:14:3.48:38,3,0	1/1:15,7:26:15.52:527,16,0	1/1:7,3:12:6.02:139,6,0	1/1:16,3:19:10.28:218,10,0	0/0:38,0:38:96.26:0,96,2286	0/0:13,0:13:9.01:0,9,138	0/0:3,0:3:6.02:0,6,121	0/0:11,0:9:18.42:0,18,246	0/1:13,0:12:0.01:0,0,1	0/0:6,0:6:0.89:0,1,2	1/1:7,2:11:9.03:216,9,0	0/0:7,1:8:0:0,0,0	0/0:14,0:14:0.89:0,1,2	1/1:11,0:11:1.55:4,2,0	0/0:24,0:24:53.20:0,53,910	0/0:12,0:10:11.52:0,12,130	0/0:3,0:3:2.79:0,3,35
chr10	109593081	.	T	TCTCTCTCTCTCACACACACACACACA	11957.27	PASS	AB=0.908;AC=30;AF=0.577;AN=52;BaseQRankSum=5.315;DP=551;FS=3.643;HRun=0;HaplotypeScore=304.2626;InbreedingCoeff=0.2672;MQ=53.82;MQ0=4;MQRankSum=-6.743;QD=36.02;ReadPosRankSum=1.353;VQSLOD=3.1097;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:3.01:0,3,75	0/0:12,0:12:24.06:0,24,1274	0/0:44,0:35:74.41:0,74,2705	0/0:42,0:31:75.52:0,76,2679	1/1:9,0:21:0.47:1,0,0	1/1:6,0:24:2.39:261,2,0	1/1:18,0:25:12.51:710,13,0	0/1:23,0:20:99:386,0,388	0/1:10,4:27:99:122,0,419	0/0:35,0:35:99:0,100,5735	0/0:11,0:11:27.09:0,27,1213	1/1:17,0:18:9.50:707,10,0	1/1:28,0:28:51.16:3246,51,0	1/1:15,0:16:11.63:660,12,0	1/1:20,0:21:15.05:637,15,0	0/0:33,0:34:99:0,102,5586	0/1:14,0:14:53.50:745,0,53	0/1:6,0:6:99:239,0,133	0/1:9,0:8:99:249,0,161	1/1:13,0:12:3.99:28,4,0	1/1:12,0:12:3.01:50,3,0	1/1:13,0:13:9.03:191,9,0	./.	0/1:6,0:13:0:0,0,1	./.	0/1:26,0:26:99:2376,0,175	0/1:16,0:15:29.37:1042,0,29	1/1:4,0:5:9.03:307,9,0
chr10	109594368	.	TTTTTTTTG	T	5454.61	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=3.600;DP=648;FS=1.417;HRun=0;HaplotypeScore=203.0858;InbreedingCoeff=0.3433;MQ=62.03;MQ0=5;MQRankSum=-6.932;QD=12.93;ReadPosRankSum=-6.807;VQSLOD=1.2730;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:30.42:424,30,0	0/0:7,0:7:21.02:0,21,739	0/0:26,0:21:39.87:0,40,672	0/0:21,0:13:27.60:0,28,433	0/1:26,0:25:24.62:25,0,1759	0/1:27,0:27:46.21:46,0,1676	0/1:25,0:25:99:223,0,759	1/1:8,23:31:53.80:664,54,0	0/0:27,0:27:26.75:0,27,1894	0/0:27,0:27:72.20:0,72,2443	0/0:18,0:18:51.16:0,51,1727	0/1:37,0:37:57.42:57,0,2143	0/1:19,0:19:97.60:98,0,810	0/1:31,0:31:84.59:85,0,1900	0/0:41,0:41:19.39:0,19,3014	0/0:23,0:23:66.16:0,66,1985	1/1:27,0:28:43.35:674,43,0	1/1:4,12:15:15.05:250,15,0	1/1:15,0:15:41.43:425,41,0	1/1:6,6:11:23.76:346,24,0	1/1:18,0:18:40.05:399,40,0	0/1:24,0:24:85.76:86,0,1260	0/1:17,0:17:39.75:40,0,1107	0/0:36,0:36:9.91:0,10,2579	0/1:19,0:19:90.72:91,0,1096	1/1:24,0:24:65.46:853,65,0	1/1:7,20:27:26.54:393,27,0	1/1:4,2:6:14.96:277,15,0
chr10	109594383	.	TG	T	1145.72	PASS	AB=0.957;AC=13;AF=0.232;AN=56;BaseQRankSum=12.642;DP=652;FS=3.307;HRun=1;HaplotypeScore=135.7072;InbreedingCoeff=0.2916;MQ=58.39;MQ0=4;MQRankSum=-7.672;QD=5.51;ReadPosRankSum=-2.496;VQSLOD=-0.3895;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:17:51.31:127,0,51	0/0:9,0:9:24.08:0,24,365	0/0:21,0:17:7.90:0,8,526	0/0:18,0:10:18.05:0,18,231	0/0:23,0:22:66.22:0,66,1008	0/0:26,0:26:78.23:0,78,1141	0/0:19,0:19:57.07:0,57,782	0/1:37,0:35:62.23:134,0,62	0/0:31,0:31:93.30:0,93,1381	0/0:33,0:33:96.30:0,96,1392	0/0:20,0:20:60.17:0,60,845	0/0:34,0:34:99:0,102,1527	0/0:15,0:15:45.15:0,45,680	0/0:32,0:32:96.26:0,96,1383	0/0:44,0:44:99:0,132,1960	0/0:24,0:24:69.20:0,69,986	0/1:27,3:28:67.25:121,0,67	1/1:16,1:17:13.15:95,13,0	0/1:16,0:16:99:117,0,109	0/1:13,1:13:9.25:96,0,9	0/1:17,0:17:21.96:127,0,22	0/0:28,0:28:81.24:0,81,1170	0/0:16,0:16:48.14:0,48,708	0/0:37,0:37:99:0,108,1559	0/0:14,0:14:42.03:0,42,611	0/1:26,1:27:4.09:267,0,4	1/1:24,4:28:4.15:144,4,0	1/1:3,1:5:12.89:80,13,0
chr10	109594387	.	TG	T	1419.70	PASS	AB=0.820;AC=16;AF=0.286;AN=56;BaseQRankSum=15.170;DP=655;FS=2.378;HRun=1;HaplotypeScore=135.4474;InbreedingCoeff=0.6212;MQ=58.88;MQ0=4;MQRankSum=-11.544;QD=6.86;ReadPosRankSum=-3.938;VQSLOD=-0.7454;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,3:18:19.37:136,0,19	0/0:9,0:9:27.08:0,27,390	0/0:22,0:17:34.56:0,35,531	0/0:19,0:12:32.97:0,33,405	0/0:25,0:24:69.13:0,69,1005	0/0:25,0:25:75.19:0,75,1112	0/0:18,0:18:54.17:0,54,781	1/1:26,9:33:18.55:240,19,0	0/0:32,0:32:96.29:0,96,1408	0/0:32,0:32:93.30:0,93,1371	0/0:21,0:21:63.20:0,63,920	0/0:37,0:37:99:0,111,1594	0/0:17,0:17:51.15:0,51,739	0/0:31,0:31:93.29:0,93,1358	0/0:43,0:43:99:0,129,1934	0/0:22,0:22:66.18:0,66,926	0/1:20,11:29:27.13:168,0,27	1/1:13,3:17:19.08:117,19,0	0/1:13,4:17:34.01:109,0,34	1/1:8,4:12:5.54:99,6,0	0/1:12,2:14:23.37:62,0,23	0/0:28,0:28:81.24:0,81,1167	0/0:16,0:16:48.16:0,48,727	0/0:37,0:37:99:0,108,1632	0/0:14,0:14:42.10:0,42,614	1/1:16,14:30:58.13:432,58,0	1/1:21,5:27:22.45:169,22,0	1/1:3,2:5:12.88:79,13,0
chr10	109596372	.	G	GCA	10221.39	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-16.783;DP=849;FS=0.629;HRun=0;HaplotypeScore=108.6701;InbreedingCoeff=0.9763;MQ=61.80;MQ0=12;MQRankSum=0.372;QD=32.45;ReadPosRankSum=-0.042;VQSLOD=6.7761;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,42:53:92.12:1501,92,0	0/0:8,0:8:21.07:0,21,265	0/0:46,0:9:9.86:0,10,75	0/0:31,0:14:7.78:0,8,134	0/0:24,0:24:66.19:0,66,818	0/0:24,0:24:69.22:0,69,869	0/0:26,0:26:60.18:0,60,743	1/1:7,29:36:84.27:1341,84,0	0/0:42,0:43:99:0,102,1263	0/0:40,0:40:99:0,108,1338	0/0:16,0:16:45.14:0,45,568	0/0:42,0:43:99:0,117,1431	0/0:28,0:28:75.24:0,75,946	0/0:26,0:26:75.22:0,75,931	0/0:40,0:40:99:0,108,1361	0/0:41,0:41:99:0,111,1384	1/1:3,33:36:72.25:1197,72,0	1/1:4,20:24:51.17:821,51,0	1/1:6,7:14:30.06:420,30,0	1/1:5,23:28:48.16:798,48,0	1/1:6,42:47:99:1613,99,0	0/0:15,0:15:39.12:0,39,487	0/0:20,0:20:51.16:0,51,644	0/0:37,0:37:99:0,105,1323	0/0:25,0:26:63.03:0,63,771	1/1:5,22:28:28.35:996,28,0	1/1:5,31:36:81.28:1336,81,0	1/1:1,9:8:12.04:199,12,0
chr10	109596756	.	GT	G	12834.66	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.532;DP=901;FS=19.679;HRun=1;HaplotypeScore=88.4463;InbreedingCoeff=1.0000;MQ=81.30;MQ0=0;MQRankSum=-0.819;QD=38.31;ReadPosRankSum=0.125;VQSLOD=2.9131;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,51:51:99:1924,138,0	0/0:15,0:15:45.15:0,45,705	0/0:24,0:24:69.21:0,69,1054	0/0:24,0:24:69.16:0,69,1038	0/0:24,0:24:69.23:0,69,1077	0/0:19,0:19:57.17:0,57,883	0/0:34,0:34:99:0,102,1581	1/1:0,39:39:99:1594,117,0	0/0:34,0:34:99:0,99,1566	0/0:39,0:39:99:0,117,1816	0/0:33,0:33:99:0,99,1534	0/0:44,0:44:99:0,129,2020	0/0:35,0:35:99:0,105,1569	0/0:45,0:45:99:0,132,2079	0/0:40,0:40:99:0,117,1818	0/0:42,0:42:99:0,126,1988	1/1:0,17:17:39.13:534,39,0	1/1:0,23:23:57.19:797,57,0	1/1:0,21:21:63.15:809,63,0	1/1:0,26:26:69.16:934,69,0	1/1:0,50:50:99:1929,138,0	0/0:21,0:21:63.20:0,63,983	0/0:25,0:25:72.22:0,72,1123	0/0:36,0:36:99:0,105,1673	0/0:32,0:32:96.29:0,96,1476	1/1:0,45:45:99:1841,135,0	1/1:0,31:31:87.29:1215,87,0	1/1:0,32:32:90.30:1257,90,0
chr10	109596889	.	T	TCTTCCTTC	10676.65	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=3.119;DP=824;FS=0.000;HRun=0;HaplotypeScore=237.0620;InbreedingCoeff=0.9632;MQ=54.43;MQ0=7;MQRankSum=-11.627;QD=28.32;ReadPosRankSum=-0.716;VQSLOD=4.2312;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:46:99:0,101,2311	0/0:3,0:3:3.01:0,3,77	0/0:19,0:9:8.92:0,9,129	0/0:19,0:10:17.09:0,17,234	1/1:44,0:43:69.22:734,69,0	1/1:31,0:31:54.87:608,55,0	1/1:21,0:21:39.19:322,39,0	0/0:38,0:38:54.11:0,54,712	1/1:37,0:37:78.48:1039,78,0	0/0:40,0:40:72.10:0,72,1562	0/0:13,0:13:29.81:0,30,490	1/1:10,26:37:30.10:1196,30,0	1/1:10,15:27:24.08:921,24,0	1/1:8,24:32:30.10:1231,30,0	1/1:11,25:37:21.07:867,21,0	0/0:43,0:43:99:0,99,2065	0/0:27,0:27:29.05:0,29,1170	0/0:26,0:26:57.12:0,57,1156	0/0:22,0:19:36.04:0,36,641	0/0:29,0:28:57.08:0,57,1258	0/0:31,0:31:66.16:0,66,1330	1/1:9,17:27:33.03:1156,33,0	1/1:15,20:35:36.12:1395,36,0	1/1:13,17:31:18.06:638,18,0	1/1:18,0:18:47.84:569,48,0	0/0:33,0:33:78.23:0,78,1685	0/0:33,0:33:69.22:0,69,1574	0/0:25,0:25:21.07:0,21,480
chr10	109596913	.	CATTT	C	808.87	PASS	AB=0.948;AC=5;AF=0.089;AN=56;BaseQRankSum=7.583;DP=710;FS=0.000;HRun=0;HaplotypeScore=174.9849;InbreedingCoeff=-0.1057;MQ=56.90;MQ0=6;MQRankSum=-3.586;QD=5.90;ReadPosRankSum=-2.059;VQSLOD=2.5186;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,99,2985	0/0:5,0:5:15.05:0,15,279	0/0:18,0:14:27.10:0,27,722	0/0:23,0:17:45.55:0,46,751	0/1:37,0:36:99:308,0,1011	0/1:26,0:25:59.17:59,0,956	0/1:19,0:19:99:130,0,412	0/0:29,0:29:87.27:0,87,2027	0/1:38,0:38:99:128,0,1386	0/0:32,0:32:93.26:0,93,2198	0/0:13,0:13:38.88:0,39,868	0/0:27,0:27:45.10:0,45,753	0/0:18,0:18:30.10:0,30,535	0/0:23,0:23:42.14:0,42,772	0/0:31,0:30:42.14:0,42,717	0/0:39,0:39:99:0,117,2955	0/0:29,0:29:80.53:0,81,1980	0/0:27,0:27:81.25:0,81,1951	0/0:23,0:21:63.17:0,63,1266	0/0:28,0:27:81.19:0,81,1898	0/0:28,0:28:45.24:0,45,1899	0/0:17,0:17:3.28:0,3,580	0/0:27,0:27:56.53:0,57,996	0/0:21,0:21:38.90:0,39,607	0/1:11,6:17:99:302,0,437	0/0:34,0:34:99:0,102,2506	0/0:31,0:30:90.29:0,90,2258	0/0:10,0:10:30.06:0,30,641
chr10	109596932	.	T	TC	609.88	PASS	AB=0.813;AC=5;AF=0.089;AN=56;BaseQRankSum=6.310;DP=655;FS=11.068;HRun=0;HaplotypeScore=126.6414;InbreedingCoeff=-0.0984;MQ=63.84;MQ0=2;MQRankSum=-6.520;QD=4.96;ReadPosRankSum=-2.695;VQSLOD=2.1062;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1420	0/0:7,0:7:21.07:0,21,292	0/0:20,0:18:45.09:0,45,577	0/0:19,0:17:21.19:0,21,491	0/1:24,10:33:99:244,0,772	0/1:23,4:26:99:112,0,821	0/1:11,2:13:59.32:59,0,383	0/0:29,0:29:87.23:0,87,1174	0/1:26,7:33:99:223,0,986	0/0:26,0:26:75.25:0,75,1042	0/0:14,0:14:39.12:0,39,529	0/0:26,0:26:57.14:0,57,743	0/0:20,0:20:51.09:0,51,670	0/0:22,0:22:45.08:0,45,595	0/0:32,0:31:57.19:0,57,794	0/0:32,0:32:93.29:0,93,1266	0/0:25,0:25:75.25:0,75,1048	0/0:25,0:25:72.24:0,72,1007	0/0:15,0:15:45.14:0,45,614	0/0:24,0:24:69.19:0,69,926	0/0:23,0:23:69.21:0,69,943	0/0:15,0:15:42.12:0,42,549	0/0:28,0:28:65.81:0,66,894	0/0:25,0:25:51.16:0,51,684	0/1:10,6:16:89.40:89,0,356	0/0:29,0:29:84.20:0,84,1149	0/0:31,0:30:87.19:0,87,1169	0/0:9,0:9:27.09:0,27,376
chr10	109597117	.	G	GAAA	8101.48	PASS	AB=0.744;AC=44;AF=0.786;AN=56;BaseQRankSum=2.720;DP=621;FS=10.606;HRun=12;HaplotypeScore=96.4133;InbreedingCoeff=0.7199;MQ=65.34;MQ0=1;MQRankSum=-1.348;QD=15.37;ReadPosRankSum=0.663;VQSLOD=2.5243;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,33:46:40.81:656,41,0	0/0:7,0:8:23.99:0,24,244	0/1:8,0:6:47.19:47,0,55	0/0:8,0:5:2.88:0,3,27	1/1:13,4:40:69.77:625,70,0	1/1:4,3:23:34.19:351,34,0	0/1:6,0:22:4.12:215,0,4	1/1:15,13:30:46.90:564,47,0	1/1:7,0:16:17.43:120,17,0	0/0:25,0:26:37.18:0,37,620	0/0:26,0:29:45.89:0,46,670	1/1:4,1:23:25.18:218,25,0	1/1:4,0:16:23.88:179,24,0	1/1:3,0:18:14.94:114,15,0	1/1:5,0:26:26.37:185,26,0	0/0:22,0:23:50.81:0,51,547	1/1:1,21:25:36.08:584,36,0	1/1:2,15:18:28.48:467,28,0	1/1:4,12:17:35.84:499,36,0	1/1:5,19:27:55.51:695,56,0	1/1:2,15:19:15:227,15,0	1/1:3,0:21:35.36:285,35,0	1/1:3,2:20:28.98:277,29,0	1/1:2,0:15:11.95:91,12,0	1/1:7,0:21:2.26:225,2,0	1/1:16,9:28:69.04:901,69,0	1/1:9,17:27:23.11:380,23,0	1/1:7,11:19:14.24:196,14,0
chr10	109598882	.	TC	T	9937.41	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=19.124;DP=749;FS=2.294;HRun=3;HaplotypeScore=93.7825;InbreedingCoeff=1.0000;MQ=83.17;MQ0=0;MQRankSum=0.189;QD=33.35;ReadPosRankSum=2.188;VQSLOD=5.2153;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:44:99:1413,114,0	0/0:13,0:13:39.12:0,39,544	0/0:24,0:24:47.80:0,48,863	0/0:22,0:22:63.20:0,63,864	0/0:22,0:22:63.21:0,63,905	0/0:22,0:22:66.19:0,66,912	0/0:28,0:28:84.26:0,84,1174	1/1:1,21:22:63.19:770,63,0	0/0:28,0:28:84.25:0,84,1171	0/0:34,0:34:93.31:0,93,1339	0/0:16,0:16:45.15:0,45,633	0/0:33,0:33:99:0,99,1422	0/0:23,0:23:69.19:0,69,934	0/0:39,0:39:99:0,117,1664	0/0:28,0:28:84.27:0,84,1191	0/0:23,0:23:69.23:0,69,994	1/1:0,37:37:99:1265,102,0	1/1:2,27:29:78.24:966,78,0	1/1:1,14:15:39.09:467,39,0	1/1:0,21:21:60.07:706,60,0	1/1:3,55:58:99:1822,147,0	0/0:19,0:19:57.18:0,57,802	0/0:22,0:22:66.22:0,66,950	0/0:34,0:34:99:0,102,1446	0/0:21,0:21:63.20:0,63,890	1/1:1,27:28:81.25:1004,81,0	1/1:0,31:31:84.26:1041,84,0	1/1:0,13:13:39.12:484,39,0
chr10	109599301	.	C	CT	4424.55	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=-6.037;DP=672;FS=9.933;HRun=12;HaplotypeScore=89.9176;InbreedingCoeff=0.8884;MQ=65.83;MQ0=0;MQRankSum=0.698;QD=15.58;ReadPosRankSum=-1.470;VQSLOD=4.4606;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,32:40:84.06:805,84,0	0/0:8,0:8:23.85:0,24,173	0/1:12,0:9:0.32:0,0,23	0/1:14,0:13:1.73:2,0,37	0/0:4,0:22:31.07:0,31,92	0/0:0,0:16:24.44:0,24,71	0/0:2,0:19:32.58:0,33,94	1/1:8,25:33:60:553,60,0	0/0:0,0:27:48.89:0,49,141	0/0:35,0:36:60.43:0,60,439	0/0:16,0:18:31.74:0,32,221	0/0:24,0:25:55.82:0,56,408	0/0:27,0:29:63.57:0,64,441	0/0:32,1:33:42.18:0,42,467	0/0:28,0:28:50.60:0,51,372	0/0:24,1:25:30.38:0,30,378	1/1:4,23:28:59.93:569,60,0	1/1:4,13:17:27.47:254,27,0	1/1:7,17:24:8.43:382,8,0	1/1:4,16:21:8.07:370,8,0	1/1:9,11:19:15.02:146,15,0	0/0:28,0:30:34.24:0,34,388	0/0:26,0:26:59.56:0,60,432	0/0:25,0:27:55.53:0,56,390	0/0:0,0:19:32.59:0,33,94	1/1:8,23:32:34.11:629,34,0	1/1:4,18:23:29.02:430,29,0	1/1:6,11:18:13.98:284,14,0
chr10	109599975	.	CTG	C	10537.74	PASS	AB=0.554;AC=19;AF=0.339;AN=56;BaseQRankSum=17.407;DP=1067;FS=9.199;HRun=0;HaplotypeScore=138.2639;InbreedingCoeff=0.9175;MQ=63.65;MQ0=4;MQRankSum=-4.399;QD=27.44;ReadPosRankSum=-0.287;VQSLOD=5.9107;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,37:42:99:1244,102,0	0/0:12,0:12:30.10:0,30,492	0/0:32,1:26:14.65:0,15,637	0/0:32,0:26:26.86:0,27,429	0/0:36,0:36:84.29:0,84,1370	0/0:24,0:24:60.20:0,60,982	0/0:31,0:31:87.30:0,87,1418	1/1:19,39:58:99:1423,110,0	0/0:54,1:55:99:0,110,2287	0/0:51,0:51:99:0,126,1994	0/0:24,0:24:63.20:0,63,1004	0/0:45,0:45:99:0,108,1769	0/0:42,0:42:99:0,111,1786	0/0:49,0:49:99:0,135,2214	0/0:53,0:52:99:0,132,2165	0/0:64,1:65:99:0,128,2595	1/1:11,21:32:75.19:911,75,0	1/1:4,14:17:40.37:487,40,0	1/1:5,11:16:33.10:409,33,0	1/1:6,25:31:72.22:872,72,0	1/1:23,60:83:99:2439,199,0	0/0:33,0:33:87.27:0,87,1378	0/0:30,0:30:78.24:0,78,1247	0/0:44,0:44:99:0,105,1698	0/0:24,0:24:63.18:0,63,982	0/1:9,37:45:33.43:1158,0,33	1/1:6,26:32:75.19:912,75,0	1/1:3,22:26:57.01:683,57,0
chr10	109600102	.	AGT	A	8707.29	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=18.225;DP=1103;FS=7.018;HRun=0;HaplotypeScore=204.3427;InbreedingCoeff=0.9995;MQ=56.66;MQ0=3;MQRankSum=-11.109;QD=27.30;ReadPosRankSum=-5.075;VQSLOD=3.8348;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:12,22:33:39.31:878,39,0	0/0:10,0:10:30.10:0,30,519	0/0:46,0:30:51.94:0,52,986	0/0:35,0:26:68.94:0,69,1043	0/0:28,0:28:75.26:0,75,1288	0/0:18,0:18:51.17:0,51,878	0/0:34,0:34:93.17:0,93,1583	1/1:12,52:64:99:2045,159,0	0/0:44,0:44:99:0,123,2120	0/0:71,0:71:99:0,196,3285	0/0:27,0:27:69.23:0,69,1193	0/0:59,0:59:99:0,159,2612	0/0:49,0:49:99:0,138,2324	0/0:57,0:57:99:0,163,2756	0/0:84,0:84:99:0,241,4048	0/0:63,0:63:99:0,180,2987	1/1:7,28:35:78.66:1059,79,0	1/1:6,16:22:50.84:647,51,0	1/1:4,15:19:39.12:508,39,0	1/1:0,25:25:57.17:757,57,0	1/1:22,23:43:30:566,30,0	0/0:38,0:38:99:0,105,1720	0/0:27,0:27:78.25:0,78,1312	0/0:54,0:54:99:0,152,2468	0/0:40,0:40:99:0,114,1912	1/1:9,26:34:46.28:1096,46,0	1/1:4,25:29:63.21:837,63,0	1/1:3,8:11:24.08:314,24,0
chr10	109600137	.	ATG	A	5683.62	PASS	AB=0.578;AC=18;AF=0.321;AN=56;BaseQRankSum=17.254;DP=1126;FS=25.072;HRun=0;HaplotypeScore=232.9399;InbreedingCoeff=0.8734;MQ=54.89;MQ0=5;MQRankSum=-15.590;QD=21.45;ReadPosRankSum=-2.223;VQSLOD=3.3315;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,23:34:19.19:346,19,0	0/0:15,0:15:42.14:0,42,713	0/0:40,0:26:54.65:0,55,920	0/0:54,0:40:96.23:0,96,1508	0/0:31,0:31:87.28:0,87,1434	0/0:29,0:29:78.22:0,78,1246	0/0:30,0:30:75.26:0,75,1280	1/1:12,29:40:84.27:1117,84,0	0/0:57,0:57:99:0,172,2923	0/0:79,0:79:99:0,226,3745	0/0:25,0:25:72.25:0,72,1246	0/0:69,0:69:99:0,174,2885	0/0:45,0:45:99:0,120,2024	0/0:66,0:66:99:0,190,3158	0/0:90,0:90:99:0,247,4101	0/0:64,0:63:99:0,171,2829	1/1:5,17:22:42.10:527,42,0	0/1:4,7:11:0.68:218,0,1	1/1:10,19:25:66.14:826,66,0	1/1:9,22:31:48.08:639,48,0	1/1:19,20:38:28.62:454,29,0	0/0:41,0:41:99:0,111,1879	0/0:28,0:28:84.04:0,84,1348	0/0:55,0:55:99:0,140,2385	0/0:39,0:39:99:0,111,1868	0/1:5,25:29:25.68:879,0,26	1/1:3,17:20:33.06:439,33,0	1/1:1,6:7:18.06:239,18,0
chr10	109600156	.	AGT	A	4740.38	PASS	AB=0.571;AC=19;AF=0.339;AN=56;BaseQRankSum=19.143;DP=1175;FS=41.220;HRun=0;HaplotypeScore=251.9051;InbreedingCoeff=0.8919;MQ=53.19;MQ0=16;MQRankSum=-16.713;QD=16.69;ReadPosRankSum=-6.789;VQSLOD=2.3210;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:19,25:42:39.06:369,39,0	0/0:16,0:16:48.16:0,48,814	0/0:49,0:20:39.86:0,40,562	0/0:51,0:29:59.92:0,60,864	0/0:33,0:33:84.29:0,84,1409	0/0:28,0:28:63.21:0,63,1046	0/0:33,0:33:84.22:0,84,1352	1/1:16,27:36:63.19:791,63,0	0/0:65,0:65:99:0,168,2764	0/0:75,0:75:99:0,199,3217	0/0:25,0:24:66.23:0,66,1122	0/0:73,0:73:99:0,184,3074	0/0:48,0:48:99:0,129,2188	0/0:63,0:63:99:0,175,2895	0/0:90,0:90:99:0,250,4153	0/0:70,0:69:99:0,196,3289	1/1:3,17:20:42.55:482,43,0	1/1:6,6:12:2.28:194,2,0	1/1:14,13:21:39.12:485,39,0	1/1:2,24:26:55.26:536,55,0	1/1:17,30:46:36.57:319,37,0	0/0:41,0:41:99:0,114,1874	0/0:27,0:27:75.24:0,75,1234	0/0:64,0:64:99:0,161,2666	0/0:38,0:38:99:0,105,1773	0/1:9,27:34:14.85:898,0,15	1/1:4,16:19:38.87:388,39,0	1/1:1,8:9:24.03:280,24,0
chr10	109600176	.	T	TGTGA	11890.19	PASS	AB=0.660;AC=18;AF=0.321;AN=56;BaseQRankSum=10.770;DP=1210;FS=65.564;HRun=0;HaplotypeScore=274.9706;InbreedingCoeff=0.8411;MQ=52.45;MQ0=18;MQRankSum=-14.002;QD=36.81;ReadPosRankSum=-6.902;VQSLOD=2.1649;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,23:36:50.49:1225,50,0	0/0:17,0:17:48.13:0,48,838	0/0:48,0:14:33.42:0,33,422	0/0:50,0:20:36.63:0,37,469	0/0:36,0:36:99:0,99,1759	0/0:31,0:31:78.01:0,78,1349	0/0:29,0:29:74.52:0,75,1318	1/1:34,25:51:99:2423,126,0	0/0:59,0:59:99:0,159,2876	0/0:69,0:68:99:0,196,3498	0/0:28,0:27:78.21:0,78,1340	0/0:75,0:75:99:0,209,3655	0/0:53,0:53:99:0,156,2751	0/0:55,0:55:99:0,162,2874	0/0:93,0:93:99:0,268,4703	0/0:68,0:67:99:0,193,3433	1/1:9,13:22:44.98:1031,45,0	0/1:10,5:15:86.84:375,0,87	1/1:11,9:17:49.01:1132,49,0	1/1:12,22:34:44.98:1025,45,0	1/1:37,19:54:38.98:814,39,0	0/0:45,0:44:99:0,107,2220	0/0:29,0:29:78.24:0,78,1390	0/0:69,0:69:99:0,177,3137	0/0:33,0:33:93.25:0,93,1573	0/1:10,29:38:11.58:2094,0,12	1/1:6,13:18:20.70:888,21,0	1/1:6,11:17:42.12:883,42,0
chr10	109600338	.	TGTGA	T	5110.37	PASS	AB=0.684;AC=18;AF=0.321;AN=56;BaseQRankSum=12.773;DP=1027;FS=6.132;HRun=0;HaplotypeScore=230.5592;InbreedingCoeff=0.8335;MQ=52.48;MQ0=27;MQRankSum=-12.885;QD=23.99;ReadPosRankSum=-2.718;VQSLOD=3.6986;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,13:24:12.04:222,12,0	0/0:16,0:16:45.13:0,45,1091	0/0:40,0:14:41.77:0,42,771	0/0:48,0:12:33:0,33,687	0/0:38,0:38:99:0,105,2741	0/0:31,0:31:81.21:0,81,1943	0/0:24,0:24:66.17:0,66,1575	0/1:19,18:28:7:1174,0,7	0/0:53,0:53:99:0,150,3772	0/0:62,0:61:99:0,172,4080	0/0:35,0:35:99:0,102,2388	0/0:59,0:59:99:0,165,4164	0/0:57,0:57:99:0,172,4379	0/0:52,0:52:99:0,154,4045	0/0:76,0:76:99:0,226,5748	0/0:56,0:56:99:0,157,3868	1/1:8,10:17:24.85:486,25,0	0/1:9,7:14:10.20:321,0,10	1/1:8,2:6:14.95:192,15,0	1/1:8,15:21:24.07:423,24,0	1/1:21,7:27:10.91:183,11,0	0/0:45,0:45:99:0,129,3231	0/0:36,0:36:99:0,99,2479	0/0:58,0:58:99:0,162,4162	0/0:28,0:28:84.27:0,84,2104	1/1:8,19:27:75.20:1304,75,0	1/1:2,13:15:33.11:632,33,0	1/1:3,12:15:8.99:173,9,0
chr10	109600363	.	GTA	G	2982.72	PASS	AB=0.678;AC=18;AF=0.321;AN=56;BaseQRankSum=14.655;DP=986;FS=1.360;HRun=0;HaplotypeScore=200.6121;InbreedingCoeff=0.8198;MQ=54.17;MQ0=4;MQRankSum=-13.506;QD=18.76;ReadPosRankSum=0.184;VQSLOD=3.6773;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,14:21:9.01:120,9,0	0/0:16,0:16:48.08:0,48,851	0/0:43,0:29:87.21:0,87,1399	0/0:34,0:23:65.59:0,66,1018	0/0:36,0:36:99:0,102,1925	0/0:26,0:26:72.23:0,72,1344	0/0:26,0:26:78.24:0,78,1431	1/1:10,23:31:77.59:1020,78,0	0/0:63,0:63:99:0,181,3118	0/0:64,0:63:99:0,190,3486	0/0:32,0:32:96.22:0,96,1612	0/0:55,0:55:99:0,141,2968	0/0:60,0:60:99:0,175,3163	0/0:61,0:61:99:0,183,3223	0/0:81,0:81:99:0,219,4246	0/0:64,0:64:99:0,180,3321	1/1:3,7:10:1.10:191,1,0	0/1:5,5:11:14.98:201,0,15	1/1:1,3:3:9.03:123,9,0	1/1:3,14:17:17.16:237,17,0	0/1:13,9:22:0.50:0,0,1	0/0:42,0:42:99:0,120,2165	0/0:30,0:30:73.80:0,74,1552	0/0:57,0:57:99:0,159,2820	0/0:37,0:37:99:0,105,1972	1/1:3,21:24:50.20:831,50,0	1/1:1,13:14:23.67:329,24,0	1/1:0,3:3:9.03:122,9,0
chr10	109600368	.	AGT	A	2050.94	PASS	AB=0.665;AC=17;AF=0.304;AN=56;BaseQRankSum=13.389;DP=971;FS=8.886;HRun=0;HaplotypeScore=198.0334;InbreedingCoeff=0.7801;MQ=54.67;MQ0=2;MQRankSum=-12.989;QD=14.14;ReadPosRankSum=0.694;VQSLOD=2.6540;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,15:20:9.02:101,9,0	0/0:17,0:17:45.14:0,45,744	0/0:37,0:26:54.18:0,54,925	0/0:33,0:23:50.19:0,50,798	0/0:35,0:35:93.30:0,93,1564	0/0:28,0:28:78.25:0,78,1303	0/0:27,0:27:72.23:0,72,1208	1/1:10,19:28:50.63:616,51,0	0/0:63,0:63:99:0,168,2767	0/0:72,0:71:99:0,199,3265	0/0:33,0:33:87.30:0,87,1487	0/0:52,0:52:99:0,147,2409	0/0:56,0:56:99:0,160,2673	0/0:61,0:61:99:0,169,2814	0/0:80,0:80:99:0,211,3566	0/0:66,0:66:99:0,168,2841	0/1:3,7:10:4.50:155,0,4	0/1:5,5:10:41.74:168,0,42	1/1:2,2:3:6:72,6,0	1/1:1,13:14:17.19:199,17,0	0/1:13,7:20:0.50:0,0,1	0/0:42,0:42:99:0,108,1848	0/0:29,0:29:81.28:0,81,1375	0/0:57,0:57:99:0,154,2587	0/0:38,0:38:99:0,99,1695	1/1:5,17:22:15.44:546,15,0	1/1:0,13:13:24.07:280,24,0	1/1:0,3:3:9.03:102,9,0
chr10	109600423	.	ATGTGAGTGTGTGT	A	6629.77	PASS	AB=1.000;AC=17;AF=0.315;AN=54;BaseQRankSum=15.096;DP=1040;FS=11.096;HRun=0;HaplotypeScore=409.5022;InbreedingCoeff=0.9045;MQ=54.83;MQ0=26;MQRankSum=-13.563;QD=34.71;ReadPosRankSum=-2.215;VQSLOD=2.5589;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,8:16:12.22:476,12,0	0/0:21,0:21:63.22:0,63,3630	0/1:43,0:17:1.76:2,0,789	0/0:34,0:13:17.18:0,17,478	0/0:29,0:29:84.23:0,84,4056	0/0:31,0:32:87.19:0,87,4640	0/0:23,0:24:66.20:0,66,3339	1/1:6,20:22:42.79:676,43,0	0/0:62,0:62:99:0,175,9836	0/0:78,0:78:99:0,216,11501	0/0:37,0:37:99:0,105,5600	0/0:67,0:67:99:0,175,9532	0/0:60,0:60:99:0,172,9007	0/0:64,0:64:99:0,187,10486	0/0:86,0:86:99:0,253,13605	0/0:80,0:80:99:0,223,11339	0/0:2,2:4:1.55:0,2,4	1/1:6,4:9:20.73:451,21,0	1/1:5,13:19:33.84:1376,34,0	1/1:5,9:14:20.88:831,21,0	1/1:21,6:30:11.33:341,11,0	0/0:44,0:44:99:0,129,6968	0/0:28,0:28:81.23:0,81,4502	0/0:59,0:59:99:0,154,8906	0/0:39,0:39:99:0,105,5926	1/1:8,15:22:59.33:1883,59,0	1/1:3,7:10:14.85:593,15,0	./.
chr10	109600436	.	T	TGAG	799.87	PASS	AB=0.831;AC=12;AF=0.222;AN=54;BaseQRankSum=10.000;DP=1044;FS=41.862;HRun=0;HaplotypeScore=242.0149;InbreedingCoeff=0.3252;MQ=53.97;MQ0=25;MQRankSum=-9.531;QD=5.59;ReadPosRankSum=-1.830;VQSLOD=1.1234;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,2:13:4.68:5,0,23	0/0:24,0:24:69.24:0,69,1284	0/0:43,0:18:42.05:0,42,692	0/0:34,0:9:21.07:0,21,351	0/0:28,0:28:78.74:0,79,1447	0/0:33,0:33:96.24:0,96,1713	0/0:24,0:24:68.99:0,69,1246	1/1:28,0:21:23.43:237,23,0	0/0:64,0:64:99:0,187,3421	0/0:78,0:78:99:0,220,4034	0/0:42,0:42:99:0,120,2189	0/0:65,0:65:99:0,181,3280	0/0:62,0:61:99:0,181,3248	0/0:65,0:65:99:0,190,3506	0/0:85,0:85:99:0,238,4401	0/0:75,0:75:99:0,217,3886	1/1:2,1:5:3:29,3,0	0/1:4,3:7:43.94:202,0,44	0/1:15,1:19:99:230,0,131	1/1:12,0:13:20.36:102,20,0	0/1:17,7:26:19.24:19,0,23	0/0:47,0:47:99:0,138,2565	0/0:29,0:29:87.30:0,87,1618	0/0:63,0:64:99:0,166,3032	0/0:39,0:39:99:0,108,1934	0/1:20,0:22:99:114,0,113	0/1:7,0:7:19.69:20,0,24	./.
chr10	109600462	.	TTGTG	T	1173.52	PASS	AB=0.871;AC=16;AF=0.286;AN=56;BaseQRankSum=12.532;DP=991;FS=0.509;HRun=0;HaplotypeScore=232.7898;InbreedingCoeff=0.7638;MQ=53.27;MQ0=23;MQRankSum=-11.572;QD=7.98;ReadPosRankSum=0.134;VQSLOD=2.5394;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,1:12:2.65:25,3,0	0/0:24,0:24:66.20:0,66,1620	0/0:49,0:20:35.46:0,35,563	0/0:37,0:12:29.95:0,30,479	0/0:29,0:29:75.24:0,75,1870	0/0:29,0:29:78.25:0,78,1954	0/0:30,0:30:78.25:0,78,1924	1/1:21,0:10:17.90:147,18,0	0/0:53,0:53:99:0,102,3117	0/0:74,0:74:99:0,202,4873	0/0:33,0:33:90.28:0,90,2211	0/0:59,0:59:99:0,169,4178	0/0:53,0:52:99:0,148,3670	0/0:57,0:57:99:0,166,4128	0/0:78,0:78:99:0,223,5336	0/0:70,0:70:99:0,184,4462	1/1:5,3:7:17.37:129,17,0	0/1:7,4:9:2.14:168,0,2	1/1:15,1:16:35.96:337,36,0	0/1:15,0:15:0.16:1,0,0	0/1:20,10:30:9.18:27,0,9	0/0:46,0:46:99:0,132,3213	0/0:33,0:33:99:0,99,2377	0/0:59,0:59:99:0,156,3692	0/0:31,0:31:84.26:0,84,2050	1/1:24,0:23:36.99:441,37,0	1/1:8,0:8:8.99:77,9,0	0/1:2,0:2:0:0,0,0
chr10	109600471	.	TGA	T	1866.11	PASS	AB=0.827;AC=16;AF=0.286;AN=56;BaseQRankSum=14.761;DP=1008;FS=4.336;HRun=0;HaplotypeScore=196.8258;InbreedingCoeff=0.8415;MQ=52.11;MQ0=28;MQRankSum=-12.003;QD=11.31;ReadPosRankSum=-4.509;VQSLOD=2.7027;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:8,8:17:14.18:20,0,14	0/0:21,0:21:60.21:0,60,1141	0/0:44,0:13:18.06:0,18,320	0/0:45,0:13:9.01:0,9,339	0/0:28,0:28:75.12:0,75,1342	0/0:29,0:30:85.47:0,85,1508	0/0:32,0:32:93.22:0,93,1526	1/1:17,11:20:53.74:428,54,0	0/0:46,1:47:99:0,101,2309	0/0:67,0:67:99:0,196,3394	0/0:30,0:30:87.22:0,87,1586	0/0:58,0:58:99:0,165,2961	0/0:52,0:51:99:0,153,2713	0/0:58,0:58:99:0,174,3033	0/0:79,0:79:99:0,231,3964	0/0:65,0:65:99:0,180,3275	1/1:6,4:9:19.95:153,20,0	1/1:8,5:11:23.38:166,23,0	1/1:5,11:16:47.81:413,48,0	0/0:6,11:17:0.78:0,1,1	1/1:29,9:38:8.75:94,9,0	0/0:45,0:45:99:0,135,2357	0/0:33,0:33:96.29:0,96,1729	0/0:59,0:59:99:0,147,2656	0/0:32,0:32:86.84:0,87,1528	1/1:10,19:29:49.86:609,50,0	1/1:4,6:10:20.96:176,21,0	0/1:4,0:4:0:0,0,0
chr10	109600477	.	TGTGC	T	2699.73	PASS	AB=0.651;AC=16;AF=0.286;AN=56;BaseQRankSum=13.569;DP=1011;FS=0.837;HRun=0;HaplotypeScore=224.3233;InbreedingCoeff=0.8089;MQ=52.94;MQ0=26;MQRankSum=-8.846;QD=13.99;ReadPosRankSum=-4.097;VQSLOD=2.4875;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,8:18:15.15:33,0,15	0/0:20,0:20:60.21:0,60,1641	0/0:41,0:13:35.10:0,35,614	0/0:47,0:15:33.38:0,33,758	0/0:28,0:28:78.25:0,78,2075	0/0:30,0:30:90.22:0,90,2387	0/0:35,0:35:99:0,99,2606	1/1:18,11:23:59.35:581,59,0	0/0:47,0:47:99:0,111,3499	0/0:62,0:62:99:0,178,4670	0/0:30,0:30:89.96:0,90,2297	0/0:54,0:54:99:0,156,4135	0/0:51,0:50:99:0,150,3986	0/0:59,0:59:99:0,178,4464	0/0:81,0:81:99:0,232,5980	0/0:62,0:62:99:0,181,4850	1/1:8,4:11:19.40:208,19,0	1/1:8,5:11:26.88:280,27,0	1/1:7,11:17:42.01:541,42,0	1/1:10,10:20:3.37:27,3,0	1/1:34,10:44:16.90:162,17,0	0/0:44,0:44:99:0,129,3450	0/0:31,0:31:93.32:0,93,2485	0/0:57,0:57:99:0,160,4086	0/0:32,0:32:90.30:0,90,2344	0/1:10,18:28:1.74:830,0,2	1/1:5,6:11:21.01:231,21,0	0/0:6,0:6:0.33:0,0,1
chr10	109600569	.	TGTGA	T	9394.36	PASS	AB=0.598;AC=17;AF=0.304;AN=56;BaseQRankSum=17.218;DP=1183;FS=0.968;HRun=0;HaplotypeScore=183.4497;InbreedingCoeff=0.7442;MQ=53.54;MQ0=52;MQRankSum=-4.779;QD=28.99;ReadPosRankSum=2.698;VQSLOD=4.6890;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,32:35:21.07:406,21,0	0/0:16,0:16:48.08:0,48,1248	0/0:42,0:10:23.13:0,23,479	0/0:46,0:12:30.74:0,31,446	0/0:39,0:38:96.49:0,96,2780	0/0:26,0:26:66.06:0,66,1729	0/0:43,0:41:99:0,102,2534	1/1:11,8:14:17.98:220,18,0	0/0:49,0:49:99:0,131,3088	0/0:61,0:60:99:0,178,4512	0/0:31,0:31:90.29:0,90,2284	0/0:57,0:57:99:0,156,4085	0/0:43,0:43:99:0,123,3248	0/0:54,0:54:99:0,160,4013	0/0:87,0:87:99:0,250,6244	0/0:81,0:79:99:0,238,5964	0/1:4,13:16:22.79:597,0,23	0/1:7,12:19:42.45:637,0,42	1/1:7,23:26:75.22:1323,75,0	1/1:14,25:36:29.82:575,30,0	1/1:27,66:87:99:3068,162,0	0/0:56,0:56:99:0,147,3911	0/0:33,0:32:78.27:0,78,2075	0/0:48,0:48:99:0,128,3204	0/0:47,0:47:99:0,129,3308	0/1:13,22:32:99:1293,0,106	1/1:0,23:22:39.13:753,39,0	1/1:1,11:12:27.09:522,27,0
chr10	109600650	.	GTA	G	791.03	PASS	AB=0.610;AC=14;AF=0.259;AN=54;BaseQRankSum=8.969;DP=919;FS=13.133;HRun=0;HaplotypeScore=157.7122;InbreedingCoeff=0.6515;MQ=55.14;MQ0=7;MQRankSum=-6.667;QD=8.33;ReadPosRankSum=-3.487;VQSLOD=2.1378;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,4:6:2.96:25,3,0	0/0:10,0:10:29.88:0,30,483	0/0:39,0:27:67.90:0,68,988	0/0:50,0:36:81.11:0,81,1349	0/0:28,0:28:81.26:0,81,1489	0/0:22,0:22:60.21:0,60,1135	0/0:44,0:44:99:0,126,2301	1/1:2,7:3:6.02:84,6,0	0/0:52,0:52:99:0,150,2806	0/0:61,0:61:99:0,184,3379	0/0:23,0:23:63.22:0,63,1214	0/0:59,0:59:99:0,163,3053	0/0:44,0:44:99:0,129,2379	0/0:52,0:52:99:0,156,2809	0/0:94,0:94:99:0,265,4796	0/0:79,0:79:99:0,223,4254	./.	1/1:1,3:4:2.99:23,3,0	0/1:3,10:12:5.87:309,0,6	1/1:13,21:32:16.15:150,16,0	1/1:3,8:10:5.95:67,6,0	0/0:44,0:43:99:0,102,1957	0/0:34,0:34:90.06:0,90,1633	0/0:53,0:53:99:0,144,2689	0/0:27,0:27:75.25:0,75,1407	0/1:8,9:16:99:255,0,141	0/0:1,0:1:0.89:0,1,2	1/1:0,1:1:3.01:37,3,0
chr10	109600655	.	AGTGT	A	347.73	PASS	AB=0.631;AC=5;AF=0.100;AN=50;BaseQRankSum=6.278;DP=919;FS=22.741;HRun=0;HaplotypeScore=198.3332;InbreedingCoeff=0.3247;MQ=55.39;MQ0=6;MQRankSum=-6.160;QD=5.43;ReadPosRankSum=-1.030;VQSLOD=1.2748;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:3,4:6:0.94:0,1,1	0/0:11,0:11:33.11:0,33,809	0/0:43,0:32:72.24:0,72,1649	0/0:47,0:36:61.64:0,62,1851	0/0:26,0:26:75.26:0,75,1923	0/0:21,0:21:57.18:0,57,1409	0/0:42,0:42:99:0,105,2625	./.	0/0:56,0:56:99:0,151,3807	0/0:59,0:59:99:0,172,4321	0/0:25,0:25:72.25:0,72,1801	0/0:62,0:62:99:0,166,4224	0/0:50,0:50:99:0,138,3565	0/0:50,0:51:99:0,147,3696	0/0:96,0:96:99:0,253,6317	0/0:76,0:76:99:0,214,5253	./.	./.	0/1:6,8:13:57.23:270,0,57	0/1:10,13:31:26.68:47,0,27	0/0:4,5:8:0.47:0,0,1	0/0:47,0:46:99:0,105,2636	0/0:33,0:33:81.12:0,81,2049	0/0:52,0:52:99:0,132,3387	0/0:26,0:26:60.04:0,60,1509	0/1:8,5:16:92.89:93,0,227	0/0:1,0:1:0:0,0,0	1/1:0,1:1:3.01:46,3,0
chr10	109600680	.	GTAAA	G	230.81	PASS	AB=0.785;AC=6;AF=0.115;AN=52;BaseQRankSum=6.371;DP=921;FS=30.515;HRun=0;HaplotypeScore=222.8725;InbreedingCoeff=0.4310;MQ=55.82;MQ0=3;MQRankSum=-6.397;QD=6.79;ReadPosRankSum=-0.813;VQSLOD=1.4639;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,4:7:6.49:0,6,17	0/0:17,0:17:51.17:0,51,1325	0/0:42,0:36:96.12:0,96,2337	0/0:43,0:38:99:0,108,2682	0/0:26,0:26:78.25:0,78,1985	0/0:24,0:24:69.20:0,69,1796	0/0:50,0:50:99:0,147,3899	1/1:4,0:2:5.36:32,5,0	0/0:48,0:48:99:0,144,3886	0/0:67,0:67:99:0,191,5115	0/0:21,0:21:63.19:0,63,1631	0/0:62,0:62:99:0,187,4868	0/0:55,0:55:99:0,162,4221	0/0:46,0:46:99:0,135,3764	0/0:89,0:89:99:0,264,6874	0/0:67,0:67:99:0,202,5470	0/0:4,1:2:2.04:0,2,6	./.	0/1:9,5:13:51.85:209,0,52	0/0:29,10:37:40.09:0,40,238	0/0:4,4:7:8.71:0,9,23	0/0:49,0:49:99:0,142,3754	0/0:28,0:28:78.73:0,79,2069	0/0:65,0:65:99:0,184,5005	0/0:25,0:25:75.22:0,75,1886	0/1:12,3:15:71.59:72,0,217	1/1:0,1:1:3.01:34,3,0	./.
chr10	109600684	.	A	ATG	1088.58	PASS	AB=0.882;AC=12;AF=0.240;AN=50;BaseQRankSum=10.178;DP=925;FS=1.415;HRun=0;HaplotypeScore=187.6498;InbreedingCoeff=0.7389;MQ=55.09;MQ0=7;MQRankSum=-9.789;QD=12.96;ReadPosRankSum=-3.834;VQSLOD=2.9924;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:7:0:0,0,0	0/0:19,0:19:42.14:0,42,559	0/0:38,0:31:66.14:0,66,806	0/0:46,0:39:93.20:0,93,1165	0/0:27,0:27:66.20:0,66,850	0/0:24,0:24:63.18:0,63,805	0/0:50,0:50:99:0,132,1703	1/1:4,0:2:5.23:44,5,0	0/0:49,0:49:99:0,129,1682	0/0:68,0:68:99:0,178,2320	0/0:22,0:22:45.15:0,45,599	0/0:62,0:62:99:0,168,2172	0/0:53,0:53:99:0,147,1936	0/0:45,0:45:99:0,129,1684	0/0:88,0:88:99:0,226,2921	0/0:68,0:68:99:0,190,2489	1/1:4,0:1:2.94:18,3,0	./.	1/1:13,0:12:16.05:234,16,0	1/1:24,16:38:47.87:731,48,0	./.	0/0:49,1:50:68.64:0,69,1490	0/0:30,0:30:75.14:0,75,992	0/0:66,0:66:99:0,161,2117	0/0:27,0:27:62.41:0,62,793	0/1:9,4:13:20.67:192,0,21	1/1:1,0:1:2.94:18,3,0	./.
chr10	109600694	.	G	GTA	488.09	PASS	AB=0.812;AC=9;AF=0.180;AN=50;BaseQRankSum=6.475;DP=920;FS=37.127;HRun=0;HaplotypeScore=180.8687;InbreedingCoeff=0.5579;MQ=55.11;MQ0=24;MQRankSum=-6.464;QD=6.42;ReadPosRankSum=0.714;VQSLOD=1.7400;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:4,5:7:0:0,0,0	0/0:20,0:20:57.19:0,57,868	0/0:31,0:20:56.91:0,57,755	0/0:47,0:31:84.18:0,84,1150	0/0:28,0:28:81.23:0,81,1167	0/0:23,0:23:63.20:0,63,940	0/0:51,0:51:99:0,150,2194	1/1:5,2:3:5.97:76,6,0	0/0:46,0:46:99:0,132,1940	0/0:69,0:69:99:0,205,2974	0/0:22,0:22:66.22:0,66,1009	0/0:56,0:56:99:0,153,2248	0/0:53,0:53:99:0,156,2281	0/0:46,0:46:99:0,126,1899	0/0:84,0:84:99:0,226,3213	0/0:70,0:69:99:0,204,2910	./.	./.	1/1:6,5:10:17.05:393,17,0	0/1:30,5:33:30.25:34,0,30	0/0:6,1:6:1.24:0,1,3	0/0:48,0:48:99:0,132,1900	0/0:30,0:30:84.22:0,84,1198	0/0:71,0:71:99:0,178,2624	0/0:34,0:34:95.48:0,95,1340	0/1:10,1:11:49.58:82,0,50	1/1:3,0:2:1.34:33,1,0	./.
chr10	109600708	.	ATGTGAGTGTGTGT	A	2016.83	PASS	AB=0.818;AC=11;AF=0.220;AN=50;BaseQRankSum=10.108;DP=930;FS=13.256;HRun=0;HaplotypeScore=359.8965;InbreedingCoeff=0.6865;MQ=54.71;MQ0=35;MQRankSum=-9.114;QD=28.81;ReadPosRankSum=0.480;VQSLOD=1.3817;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:6:0.46:0,0,1	0/0:24,0:24:72.25:0,72,4121	0/0:33,0:13:3.18:0,3,416	0/0:47,0:22:62.42:0,62,1321	0/0:29,0:29:78.23:0,78,4123	0/0:25,0:26:63.20:0,63,3552	0/0:50,0:50:99:0,141,7948	1/1:7,0:2:2.80:13,3,0	0/0:42,0:42:99:0,114,5962	0/0:68,0:68:99:0,172,9434	0/0:26,0:26:75.24:0,75,4180	0/0:57,0:57:99:0,144,7937	0/0:53,0:52:99:0,132,7541	0/0:50,0:50:99:0,123,6642	0/0:78,0:78:99:0,205,11474	0/0:69,0:68:99:0,196,10571	./.	./.	1/1:9,0:9:24.55:122,25,0	1/1:16,16:30:40.21:1619,40,0	1/1:6,0:6:1.55:4,2,0	0/0:48,0:48:95.94:0,96,7047	0/0:36,0:36:99:0,99,5678	0/0:75,0:75:99:0,201,10764	0/0:33,0:33:56.21:0,56,5182	0/1:5,2:9:88.09:286,0,88	1/1:4,1:6:3.01:116,3,0	./.
chr10	109600720	.	GT	G	605.27	PASS	AB=0.727;AC=13;AF=0.260;AN=50;BaseQRankSum=10.186;DP=950;FS=12.492;HRun=2;HaplotypeScore=165.7903;InbreedingCoeff=0.8322;MQ=53.97;MQ0=37;MQRankSum=-9.664;QD=8.90;ReadPosRankSum=0.184;VQSLOD=0.0413;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:5,3:5:0.01:0,0,0	0/0:27,0:27:75.25:0,75,1114	0/0:38,0:9:21.05:0,21,256	0/0:53,1:21:12.98:0,13,531	0/0:31,0:31:90.28:0,90,1298	0/0:26,1:27:69.18:0,69,998	0/0:58,0:58:99:0,166,2398	1/1:4,2:2:0.89:2,1,0	0/0:41,0:41:99:0,111,1633	0/0:68,1:69:99:0,167,2850	0/0:29,0:29:87.29:0,87,1288	0/0:56,0:56:99:0,144,2114	0/0:45,0:43:91.42:0,91,1830	0/0:51,0:51:99:0,132,1914	0/0:84,0:84:99:0,211,3080	0/0:71,0:69:99:0,199,2888	./.	./.	1/1:5,3:8:23.74:202,24,0	1/1:21,5:25:40.76:352,41,0	1/1:4,2:5:0.47:1,0,0	0/0:51,1:52:99:0,109,2089	0/0:34,0:34:99:0,99,1461	0/0:74,1:75:99:0,196,2847	0/0:34,0:34:67.04:0,67,1345	1/1:4,4:7:19.47:182,19,0	1/1:2,4:5:2.37:8,2,0	./.
chr10	109600721	.	T	TG	732.68	PASS	AB=0.615;AC=9;AF=0.196;AN=46;BaseQRankSum=9.730;DP=953;FS=9.615;HRun=1;HaplotypeScore=167.4442;InbreedingCoeff=0.8655;MQ=53.81;MQ0=38;MQRankSum=-9.398;QD=13.08;ReadPosRankSum=0.127;VQSLOD=1.8974;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:3,5:5:0:0,0,0	0/0:26,0:26:75.25:0,75,1035	0/0:41,0:10:21.05:0,21,253	0/0:56,0:22:12.97:0,13,516	0/0:30,0:30:90.28:0,90,1223	0/0:25,0:26:69.18:0,69,935	0/0:59,0:59:99:0,166,2254	./.	0/0:39,1:40:99:0,111,1537	0/0:70,0:70:99:0,165,2698	0/0:29,0:29:87.29:0,87,1206	0/0:57,0:57:99:0,144,1982	0/0:45,1:44:89.32:0,89,1714	0/0:51,0:51:99:0,132,1807	0/0:84,0:85:99:0,211,2889	0/0:70,0:68:99:0,199,2709	./.	./.	1/1:3,5:8:24.08:357,24,0	1/1:21,5:25:40.54:318,41,0	./.	0/0:52,0:52:99:0,109,1946	0/0:33,0:33:99:0,99,1366	0/0:74,0:76:99:0,196,2669	0/0:33,0:34:71.14:0,71,1267	1/1:6,1:7:5.87:165,6,0	1/1:5,1:5:3.01:30,3,0	./.
chr10	109600734	.	AGT	A	498.88	PASS	AB=0.812;AC=7;AF=0.140;AN=50;BaseQRankSum=6.950;DP=912;FS=65.211;HRun=0;HaplotypeScore=167.1542;InbreedingCoeff=0.4568;MQ=54.47;MQ0=27;MQRankSum=-6.261;QD=13.86;ReadPosRankSum=-2.504;VQSLOD=1.1244;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:2,0:1:0:0,0,0	0/0:24,0:24:69.23:0,69,1140	0/0:41,0:8:21.06:0,21,319	0/0:50,0:18:42.14:0,42,629	0/0:31,0:31:84.27:0,84,1356	0/0:27,0:27:66.20:0,66,1110	0/0:59,0:59:99:0,135,2225	./.	0/0:42,0:42:99:0,111,1842	0/0:56,0:55:99:0,136,2231	0/0:30,0:30:87.26:0,87,1389	0/0:59,0:59:99:0,150,2430	0/0:43,0:41:99:0,111,1784	0/0:51,0:51:99:0,123,2034	0/0:92,0:92:99:0,244,4012	0/0:71,1:70:99:0,184,3041	0/0:1,0:1:2.97:0,3,20	./.	0/0:1,2:1:2.98:0,3,21	1/1:1,17:18:42.05:478,42,0	1/1:5,0:4:0.47:1,0,0	0/0:49,0:49:99:0,132,2166	0/0:34,0:34:99:0,99,1568	0/0:76,0:76:99:0,145,2926	0/0:32,0:32:96.31:0,96,1581	0/1:3,4:6:38.23:100,0,38	0/1:3,1:4:8.89:32,0,9	./.
chr10	109600758	.	TGA	T	64.03	PASS	AB=0.822;AC=7;AF=0.130;AN=54;BaseQRankSum=4.552;DP=922;FS=25.576;HRun=0;HaplotypeScore=161.5101;InbreedingCoeff=0.4535;MQ=53.34;MQ0=30;MQRankSum=-5.359;QD=2.46;ReadPosRankSum=-1.844;VQSLOD=1.1167;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:3,0:2:0:0,0,0	0/0:29,0:29:87.16:0,87,1547	0/0:40,0:7:14.78:0,15,187	0/0:42,0:13:29.17:0,29,434	0/0:33,0:33:99:0,99,1666	0/0:29,0:29:69.02:0,69,1244	0/0:50,0:50:99:0,129,2137	0/0:9,0:8:15.29:0,15,128	0/0:47,0:47:99:0,135,2338	0/0:54,0:52:99:0,160,2842	0/0:32,0:32:96.32:0,96,1786	0/0:59,0:59:99:0,144,2464	0/0:33,0:32:78.17:0,78,1336	0/0:46,0:46:99:0,108,1849	0/0:92,0:92:99:0,214,3795	0/0:74,0:72:99:0,214,3747	0/0:1,0:1:2.98:0,3,22	./.	1/1:5,1:4:11.92:90,12,0	0/0:6,10:16:1.73:0,2,3	1/1:5,0:4:0.47:1,0,0	0/0:45,0:45:99:0,123,2023	0/0:40,0:40:99:0,117,1984	0/0:83,0:83:99:0,216,3698	0/0:38,0:38:99:0,111,1814	0/1:4,4:7:60.58:61,0,145	0/1:3,1:4:9.19:21,0,9	0/0:2,1:2:5.72:0,6,29
chr10	109600764	.	TGTGC	T	135.31	PASS	AB=0.885;AC=8;AF=0.154;AN=52;BaseQRankSum=5.085;DP=898;FS=34.220;HRun=0;HaplotypeScore=187.1893;InbreedingCoeff=0.6101;MQ=53.21;MQ0=41;MQRankSum=-4.719;QD=5.88;ReadPosRankSum=-1.305;VQSLOD=1.4099;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:3,0:2:0:0,0,0	0/0:29,0:29:87.30:0,87,2370	0/0:38,0:4:8.99:0,9,185	0/0:41,0:11:27.07:0,27,576	0/0:30,0:30:87.30:0,87,2349	0/0:29,0:29:69.04:0,69,1827	0/0:45,0:45:99:0,120,3185	0/0:15,0:12:27.24:0,27,194	0/0:48,0:48:99:0,138,3517	0/0:55,0:53:99:0,160,4257	0/0:32,0:32:96.33:0,96,2597	0/0:62,0:62:99:0,150,3767	0/0:30,0:29:78.19:0,78,2042	0/0:45,0:45:99:0,102,2729	0/0:93,0:93:99:0,216,5741	0/0:73,0:72:99:0,208,5471	0/0:1,0:1:2.97:0,3,20	./.	1/1:2,1:3:6:76,6,0	0/0:5,10:15:1.63:0,2,4	./.	0/0:39,0:39:99:0,105,2825	0/0:36,0:36:99:0,105,2881	0/0:78,0:78:99:0,213,5650	0/0:37,0:37:99:0,108,2781	0/1:7,3:9:99:104,0,221	1/1:3,1:4:4.83:47,5,0	1/1:2,1:2:5.72:30,6,0
chr10	109600806	.	A	AGTGT	896.77	PASS	AB=0.808;AC=15;AF=0.278;AN=54;BaseQRankSum=8.032;DP=888;FS=30.499;HRun=0;HaplotypeScore=184.7676;InbreedingCoeff=0.6741;MQ=54.21;MQ0=41;MQRankSum=-7.302;QD=13.38;ReadPosRankSum=-2.338;VQSLOD=1.5847;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:5,3:8:0:0,0,0	0/0:21,0:21:55.43:0,55,1040	0/0:41,0:12:32.55:0,33,485	0/0:38,0:10:26.83:0,27,448	0/0:28,0:28:75.05:0,75,1248	0/0:22,0:22:60.17:0,60,1066	0/0:48,0:48:99:0,116,2010	1/1:5,4:7:14.50:141,15,0	0/0:52,0:52:99:0,147,2750	0/0:62,0:61:99:0,181,3256	0/0:28,0:28:78.22:0,78,1400	0/0:70,0:70:99:0,163,3003	0/0:26,0:26:69.24:0,69,1322	0/0:53,0:53:99:0,117,2108	0/0:89,0:89:99:0,216,3936	0/0:70,0:70:99:0,208,3831	1/1:0,3:4:5.71:154,6,0	1/1:2,2:5:12.04:235,12,0	0/1:6,1:6:10.49:10,0,94	1/1:5,3:8:0.94:2,1,0	./.	0/0:43,0:43:99:0,111,2014	0/0:25,0:25:72.22:0,72,1302	0/0:71,0:71:99:0,175,3051	0/0:32,0:32:84.25:0,84,1508	0/1:8,3:11:99:318,0,151	1/1:1,5:5:6.49:157,6,0	1/1:2,0:2:5.92:39,6,0
chr10	109600841	.	GTATGTGTGTA	G	1667.84	PASS	AB=0.728;AC=13;AF=0.232;AN=56;BaseQRankSum=8.200;DP=888;FS=13.159;HRun=0;HaplotypeScore=275.6285;InbreedingCoeff=0.5204;MQ=54.46;MQ0=56;MQRankSum=-8.152;QD=34.04;ReadPosRankSum=1.672;VQSLOD=1.9485;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:9:2.93:101,3,0	0/0:20,0:19:57.15:0,57,2236	0/0:49,0:11:27.09:0,27,625	0/0:38,0:11:29.96:0,30,641	0/0:26,0:26:78.27:0,78,3851	0/0:26,0:25:66.23:0,66,2911	0/0:46,0:45:99:0,114,4012	1/1:2,1:1:3.01:96,3,0	0/0:49,0:49:99:0,141,6245	0/0:58,0:58:99:0,175,8243	0/0:27,0:27:81.27:0,81,3750	0/0:74,0:74:99:0,199,8973	0/0:39,0:39:99:0,114,5239	0/0:49,0:49:99:0,132,6092	0/0:67,0:67:99:0,184,8318	0/0:74,0:74:99:0,220,10234	0/1:1,3:4:62.76:96,0,63	1/1:1,4:5:12.04:406,12,0	1/1:5,1:2:3.01:45,3,0	0/0:5,5:10:2.60:0,3,11	0/0:1,1:1:0:0,0,0	0/0:48,0:48:99:0,138,6502	0/0:31,0:30:73.12:0,73,3372	0/0:69,0:69:99:0,114,6307	0/0:34,0:34:95.61:0,96,4568	0/1:4,7:11:99:732,0,107	1/1:0,7:6:8.86:300,9,0	0/1:3,0:3:47.77:48,0,50
chr10	109600893	.	A	ATGTG	5561.72	PASS	AB=0.933;AC=23;AF=0.411;AN=56;BaseQRankSum=8.505;DP=878;FS=82.927;HRun=0;HaplotypeScore=265.9399;InbreedingCoeff=0.5740;MQ=50.13;MQ0=5;MQRankSum=-12.508;QD=14.67;ReadPosRankSum=-9.249;VQSLOD=-0.0084;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,10:24:6.01:110,6,0	0/0:12,0:12:33.11:0,33,566	0/0:49,0:31:60.16:0,60,916	0/0:38,0:20:51.06:0,51,818	0/0:38,0:38:99:0,99,1601	0/0:25,0:25:43.29:0,43,769	0/0:29,0:29:59.14:0,59,1061	1/1:35,5:38:80.99:1480,81,0	0/0:43,0:43:99:0,105,2009	0/0:53,0:52:99:0,132,2234	0/0:22,0:22:51.17:0,51,899	0/1:60,0:61:99:148,0,978	0/0:27,0:27:6.21:0,6,666	0/0:35,0:35:2.14:0,2,591	0/1:50,0:50:99:204,0,648	0/0:56,0:55:99:0,147,2536	1/1:7,9:16:24.08:485,24,0	1/1:5,3:8:12.87:252,13,0	1/1:17,2:12:21.02:372,21,0	1/1:8,5:12:18.05:328,18,0	1/1:22,8:28:17.57:417,18,0	0/1:40,0:41:22.68:23,0,663	0/1:33,0:33:5.75:6,0,496	0/0:39,0:40:48.96:0,49,735	0/0:32,0:32:84.17:0,84,1398	0/1:14,10:23:99:989,0,102	1/1:2,13:14:30.10:619,30,0	1/1:2,1:3:8.77:128,9,0
chr10	109600899	.	GTA	G	1181.63	PASS	AB=0.955;AC=13;AF=0.232;AN=56;BaseQRankSum=10.127;DP=907;FS=65.068;HRun=0;HaplotypeScore=262.3292;InbreedingCoeff=0.0679;MQ=48.76;MQ0=7;MQRankSum=-7.368;QD=4.73;ReadPosRankSum=-1.978;VQSLOD=0.9184;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:29:14.32:14,0,101	0/0:13,0:13:39.07:0,39,618	0/0:41,0:23:59.23:0,59,884	0/0:36,0:18:51.12:0,51,811	0/0:37,0:37:99:0,105,1734	0/0:24,0:24:53.88:0,54,857	0/0:29,0:28:58.72:0,59,1152	0/1:34,4:35:99:450,0,222	0/0:46,0:46:99:0,107,2051	0/0:53,0:51:99:0,150,2516	0/0:20,0:20:57.14:0,57,961	0/0:66,0:66:89.41:0,89,1357	0/0:28,0:28:46.64:0,47,896	0/0:42,0:42:78.94:0,79,891	0/0:51,0:51:31.79:0,32,884	0/0:56,0:55:99:0,140,2581	0/1:16,0:16:35.77:111,0,36	0/1:10,0:10:78.07:78,0,128	0/1:16,2:11:40.15:111,0,40	1/1:14,1:13:11.48:67,11,0	0/1:28,5:31:27.89:28,0,31	0/1:45,0:45:55.22:55,0,968	0/0:34,0:34:17.56:0,18,721	0/0:46,0:46:26.12:0,26,838	0/0:35,0:35:76.78:0,77,1418	0/1:23,2:24:99:209,0,228	0/1:17,0:15:49.13:150,0,49	1/1:2,1:3:7.79:68,8,0
chr10	109600901	.	A	ATGTGTG	7669.87	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=7.707;DP=905;FS=2.307;HRun=0;HaplotypeScore=299.5650;InbreedingCoeff=0.3613;MQ=48.64;MQ0=8;MQRankSum=-2.427;QD=15.43;ReadPosRankSum=-1.177;VQSLOD=3.9020;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:31:12.60:13,0,120	0/0:14,0:14:33.04:0,33,525	0/0:41,0:22:35.94:0,36,412	0/0:38,0:17:30.07:0,30,481	0/0:38,0:38:84.09:0,84,923	0/0:22,0:22:4.41:0,4,305	0/0:30,0:29:35.43:0,35,577	0/1:36,0:34:99:184,0,155	0/0:44,0:45:93.30:0,93,1188	0/0:53,0:51:99:0,135,2218	0/0:22,0:22:51.07:0,51,728	1/1:55,11:66:78.51:1599,79,0	1/1:24,4:28:60:872,60,0	1/1:38,3:41:48.93:618,49,0	1/1:37,14:51:78.87:1653,79,0	0/0:52,0:52:99:0,112,2005	0/1:17,0:17:7.01:7,0,52	0/1:9,0:9:42.02:42,0,115	0/1:17,0:10:14.59:42,0,15	0/1:15,0:13:3.30:3,0,4	0/1:35,0:33:28.33:28,0,30	1/1:39,5:45:84.37:1273,84,0	1/1:30,3:34:47.19:593,47,0	1/1:43,2:45:52.98:671,53,0	0/0:34,0:35:63.92:0,64,791	0/1:23,0:22:59.99:60,0,260	0/0:17,0:15:4.24:0,4,97	0/1:3,0:3:10.85:11,0,11
chr10	109600921	.	ATGTG	A	3970.59	PASS	AB=0.771;AC=19;AF=0.339;AN=56;BaseQRankSum=-0.168;DP=958;FS=85.256;HRun=0;HaplotypeScore=266.6728;InbreedingCoeff=0.8753;MQ=50.23;MQ0=8;MQRankSum=-2.530;QD=15.51;ReadPosRankSum=-2.922;VQSLOD=-0.0515;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,12:32:38.55:617,39,0	0/0:14,0:14:30.10:0,30,702	0/0:36,0:19:18.69:0,19,310	0/0:39,0:21:30.53:0,31,463	0/0:12,0:37:64.25:0,64,1090	0/0:9,0:20:27.08:0,27,436	0/0:16,0:34:21.48:0,21,328	1/1:14,22:32:56.48:662,56,0	0/0:12,0:42:71.02:0,71,1174	0/0:48,0:47:99:0,108,2412	0/0:23,0:24:47.90:0,48,966	0/0:29,0:64:39.98:0,40,608	0/0:20,0:24:23.76:0,24,311	0/0:27,0:47:31.30:0,31,241	0/0:18,0:58:45.41:0,45,696	0/0:52,0:52:99:0,100,2076	1/1:5,22:27:36.10:467,36,0	1/1:6,10:16:5.75:314,6,0	1/1:5,9:11:23.86:291,24,0	1/1:11,6:14:17.63:196,18,0	1/1:19,27:43:8.42:149,8,0	0/0:35,0:44:48.30:0,48,730	0/0:22,0:38:13.20:0,13,187	0/0:26,0:46:17.32:0,17,209	0/0:14,0:31:47.48:0,47,758	0/1:26,10:35:28.62:665,0,29	1/1:4,18:22:38.98:491,39,0	1/1:5,1:5:9.50:119,9,0
chr10	109600925	.	G	GTA	5715.69	PASS	AB=0.994;AC=31;AF=0.554;AN=56;BaseQRankSum=12.069;DP=948;FS=6.772;HRun=0;HaplotypeScore=232.3345;InbreedingCoeff=0.1331;MQ=50.40;MQ0=8;MQRankSum=-1.586;QD=8.14;ReadPosRankSum=4.224;VQSLOD=3.1415;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,6:32:13.88:422,14,0	0/0:14,0:14:42.08:0,42,552	0/0:35,0:19:26.54:0,27,430	0/0:38,0:20:54.54:0,55,641	0/1:37,0:37:99:386,0,105	0/1:19,0:19:11.87:12,0,99	0/0:32,0:32:5.58:0,6,180	0/1:35,0:31:93.47:493,0,93	0/1:41,0:41:99:397,0,228	0/0:52,0:50:99:0,141,1818	0/0:23,0:23:56.87:0,57,749	1/1:64,0:64:44.99:542,45,0	1/1:24,0:24:8.46:240,8,0	0/1:50,0:50:91.17:194,0,91	1/1:57,0:57:13.02:403,13,0	0/0:51,0:50:99:0,141,1721	1/1:27,0:27:21.75:351,22,0	0/1:15,0:15:35.20:140,0,35	1/1:11,0:11:8.12:212,8,0	0/1:20,0:16:9.09:166,0,9	0/1:46,1:44:9.71:10,0,77	0/1:42,0:42:58.77:383,0,59	1/1:34,0:34:9.50:154,10,0	1/1:46,0:46:6.22:179,6,0	0/1:31,0:31:99:252,0,111	0/1:37,2:37:98.21:391,0,98	1/1:22,0:19:25.35:306,25,0	1/1:5,1:5:0.50:82,0,0
chr10	109602316	.	CTCTCTCTCTCTT	C	3466.54	PASS	AB=1.000;AC=41;AF=0.759;AN=54;BaseQRankSum=-0.470;DP=504;FS=0.000;HRun=0;HaplotypeScore=140.1238;InbreedingCoeff=0.3619;MQ=52.88;MQ0=31;MQRankSum=-3.073;QD=8.80;ReadPosRankSum=-0.180;VQSLOD=2.5579;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:22:23.74:230,24,0	0/0:12,0:12:28.39:0,28,819	0/1:44,0:16:19.03:59,0,19	0/1:56,0:17:22.89:77,0,23	1/1:14,0:9:4.65:41,5,0	1/1:11,0:4:7.82:83,8,0	1/1:15,0:10:10.59:277,11,0	1/1:24,0:22:26.89:248,27,0	1/1:11,0:6:8.93:89,9,0	0/0:33,0:32:57.70:0,58,2084	0/0:8,0:8:21.06:0,21,610	1/1:16,0:15:11.55:78,12,0	1/1:7,0:6:2.28:9,2,0	0/1:9,0:8:32.25:32,0,84	0/1:11,0:11:18.94:19,0,42	0/0:32,0:32:77.77:0,78,2751	./.	1/1:3,10:12:5.99:127,6,0	1/1:13,0:13:14.42:144,14,0	1/1:11,2:12:23.88:236,24,0	1/1:27,0:28:33.08:453,33,0	0/1:12,0:12:60.12:60,0,88	1/1:6,0:6:8.93:66,9,0	1/1:17,0:16:5.91:49,6,0	1/1:12,0:8:2.36:24,2,0	1/1:16,0:16:32.90:449,33,0	1/1:5,2:6:14.96:280,15,0	1/1:10,1:11:23.86:335,24,0
chr10	109602386	.	CTGT	C	248.91	PASS	AB=0.866;AC=7;AF=0.125;AN=56;BaseQRankSum=3.250;DP=535;FS=0.000;HRun=0;HaplotypeScore=152.3234;InbreedingCoeff=-0.0009;MQ=54.01;MQ0=61;MQRankSum=-5.190;QD=2.59;ReadPosRankSum=-4.749;VQSLOD=0.2840;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,2:30:30.76:0,31,421	0/0:9,0:7:11.97:0,12,205	0/0:46,0:13:8.75:0,9,410	0/0:78,1:26:37.89:0,38,511	0/0:18,0:17:23.57:0,24,307	0/0:10,0:8:17.74:0,18,188	0/0:23,0:19:39.05:0,39,644	0/0:30,0:24:60.20:0,60,1190	0/0:9,0:8:14.72:0,15,158	0/0:26,0:25:62.60:0,63,1138	0/0:8,0:8:18.06:0,18,362	0/1:5,7:10:14.75:106,0,15	0/1:2,3:4:21.24:92,0,21	0/1:5,0:1:0:0,0,0	0/0:7,2:7:4.67:0,5,93	0/0:28,0:27:71.74:0,72,1217	0/0:12,1:12:0.22:0,0,123	0/1:15,1:14:15.17:15,0,125	0/0:9,0:9:27.06:0,27,400	0/0:13,0:12:26.87:0,27,317	0/0:18,1:17:32.68:0,33,370	0/0:6,3:7:2.49:0,2,31	0/1:6,0:5:0.88:1,0,20	0/0:2,11:12:0:0,0,0	0/0:12,0:12:27.24:0,27,491	0/1:24,3:27:75.80:76,0,701	0/1:24,1:24:72.29:72,0,341	0/0:25,0:23:40.01:0,40,614
chr10	109602389	.	TTCTCTCTCTCTCTCTC	T	3645	PASS	AB=0.965;AC=21;AF=0.404;AN=52;BaseQRankSum=7.248;DP=549;FS=6.753;HRun=0;HaplotypeScore=218.1805;InbreedingCoeff=0.1373;MQ=50.51;MQ0=67;MQRankSum=-4.677;QD=14.13;ReadPosRankSum=-1.183;VQSLOD=1.7939;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,2:30:13.74:278,14,0	0/0:8,0:7:3.47:0,3,29	./.	./.	0/1:18,0:18:36.72:37,0,303	0/0:14,0:12:7.27:0,7,131	0/0:20,0:18:12:0,12,297	0/1:26,4:23:78.91:121,0,79	0/0:9,0:8:9.03:0,9,174	0/0:27,0:25:49.87:0,50,2063	0/0:7,0:7:9.03:0,9,571	0/0:17,0:15:12.25:0,12,578	0/1:8,0:6:39.67:40,0,188	0/1:4,0:1:0:0,0,0	0/1:12,0:10:42.82:86,0,43	0/0:27,0:26:48.16:0,48,2468	0/0:12,1:12:6.91:0,7,216	0/1:15,2:15:99:178,0,676	0/1:8,0:8:17.39:17,0,53	1/1:11,1:11:15.03:419,15,0	1/1:17,3:17:0.47:1,0,0	1/1:10,0:8:3:26,3,0	1/1:7,0:6:3.01:58,3,0	0/0:15,0:13:0:0,0,0	0/0:12,0:12:7.43:0,7,339	0/1:28,0:28:99:814,0,976	0/1:25,0:24:99:588,0,521	1/1:25,0:24:23.66:982,24,0
chr10	109602415	.	CTCTCTCTCTCTCTCTCTGTGTGTGTGTG	C	9902.05	PASS	AB=0.928;AC=21;AF=0.404;AN=52;BaseQRankSum=7.725;DP=564;FS=1.027;HRun=0;HaplotypeScore=325.0635;InbreedingCoeff=-0.3154;MQ=35.60;MQ0=60;MQRankSum=-7.670;QD=25.59;ReadPosRankSum=0.609;VQSLOD=2.3902;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:30:18.79:648,19,0	0/0:7,0:5:6.01:0,6,223	./.	./.	0/1:24,0:22:58.41:58,0,391	0/0:18,0:15:3.83:0,4,168	0/1:18,0:14:50.32:50,0,345	0/1:24,0:16:99:518,0,191	0/1:10,0:10:16.62:17,0,200	0/0:32,0:30:80.08:0,80,4509	0/0:12,0:12:24.08:0,24,1598	0/1:32,0:28:99:142,0,2017	0/1:16,0:12:99:295,0,892	0/1:15,0:12:99:408,0,323	0/1:25,0:22:99:519,0,640	0/0:28,0:27:69.18:0,69,5168	0/0:12,0:11:7.74:0,8,247	0/1:16,0:13:99:384,0,778	0/1:11,0:8:11.41:11,0,123	1/1:14,2:16:22.13:1074,22,0	1/1:23,0:15:2.99:40,3,0	0/1:16,0:15:99:171,0,228	0/1:18,0:17:99:160,0,638	0/0:25,0:20:3.44:0,3,350	0/0:12,0:11:0.35:0,0,404	0/1:19,17:36:99:2479,0,1158	0/1:14,16:28:99:1126,0,443	0/1:8,17:23:24.64:1802,0,25
chr10	109602425	.	CTCTCTCTGTGTGTGTG	C	7443.07	PASS	AB=0.993;AC=28;AF=0.500;AN=56;BaseQRankSum=8.121;DP=531;FS=2.958;HRun=0;HaplotypeScore=246.3907;InbreedingCoeff=-0.1293;MQ=36.40;MQ0=36;MQRankSum=-6.979;QD=18.47;ReadPosRankSum=2.152;VQSLOD=3.8659;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:26:18.57:305,0,19	0/1:7,0:5:49.51:50,0,108	0/0:6,0:3:6.02:0,6,243	0/0:8,0:1:3.01:0,3,99	1/1:17,4:19:21.04:534,21,0	1/1:16,1:15:11.87:292,12,0	0/1:16,0:12:51.25:78,0,51	0/1:22,0:16:28.10:403,0,28	1/1:9,0:9:12.04:292,12,0	0/0:31,0:29:20.74:0,21,2998	0/0:14,0:14:33.10:0,33,1367	0/1:33,0:29:99:103,0,1056	0/1:18,0:14:99:204,0,522	0/1:16,0:13:99:324,0,193	0/1:28,0:25:99:358,0,392	0/0:30,0:29:65.29:0,65,3099	0/1:10,0:9:27.50:28,0,63	0/1:14,0:12:99:237,0,331	0/0:12,0:7:0:0,0,0	1/1:14,0:14:12.42:656,12,0	1/1:22,0:14:0.26:1,0,0	0/1:17,0:17:86.46:86,0,207	0/1:21,0:20:70.29:70,0,375	0/0:27,0:21:2.87:0,3,189	1/1:8,0:7:12.04:299,12,0	0/1:28,0:30:99:1530,0,352	0/1:29,0:27:99:660,0,173	1/1:23,0:21:26.89:933,27,0
chr10	109602427	.	CTCTCTGTGTGTGTGTG	C	8095.16	PASS	AB=0.995;AC=29;AF=0.518;AN=56;BaseQRankSum=8.105;DP=531;FS=2.280;HRun=0;HaplotypeScore=246.1011;InbreedingCoeff=-0.0936;MQ=36.38;MQ0=34;MQRankSum=-5.723;QD=20.04;ReadPosRankSum=2.165;VQSLOD=3.8456;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,3:26:1.69:375,2,0	0/1:7,0:5:30.74:31,0,125	0/0:5,0:3:6.02:0,6,294	0/0:7,0:1:3.01:0,3,120	1/1:20,0:18:18.04:379,18,0	1/1:17,0:15:11.87:208,12,0	0/1:16,0:12:53.15:61,0,53	0/1:21,0:16:15.73:504,0,16	1/1:9,0:9:12.04:211,12,0	0/0:30,0:29:9.80:0,10,3197	0/0:14,0:14:30.10:0,30,1505	0/1:34,0:30:99:136,0,1278	0/1:18,0:14:99:247,0,624	0/1:17,0:13:99:410,0,238	0/1:28,0:25:99:425,0,437	0/0:30,0:29:41.54:0,42,3261	0/1:10,0:9:43.52:46,0,44	0/1:12,1:11:99:286,0,303	0/0:13,0:7:0:0,0,0	1/1:13,1:14:12.64:772,13,0	1/1:22,0:14:0.87:2,1,0	0/1:17,0:17:99:113,0,281	0/1:23,0:22:94.41:94,0,520	0/0:28,0:22:2.77:0,3,231	1/1:8,0:7:12.03:223,12,0	0/1:30,0:30:99:1818,0,280	0/1:29,0:27:99:732,0,106	1/1:23,0:21:26.96:1019,27,0
chr10	109602431	.	CTGTGTGTGTGTGTGTGTG	C	5427.12	PASS	AB=0.834;AC=19;AF=0.339;AN=56;BaseQRankSum=8.997;DP=531;FS=0.000;HRun=0;HaplotypeScore=275.3885;InbreedingCoeff=-0.2034;MQ=36.46;MQ0=28;MQRankSum=-6.066;QD=15.73;ReadPosRankSum=3.255;VQSLOD=3.2605;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:26:99:134,0,106	0/0:7,0:5:3.01:0,3,195	0/0:8,0:6:15.05:0,15,1066	0/0:10,0:2:6.02:0,6,357	0/1:16,0:15:30.17:30,0,31	0/0:12,0:14:8.05:0,8,36	0/1:12,0:10:9.66:10,0,32	0/1:15,0:16:99:190,0,376	0/1:4,0:8:0.36:23,0,0	0/0:30,0:29:66.20:0,66,4474	0/0:13,0:13:30.10:0,30,2075	0/1:27,8:31:99:250,0,1965	0/1:14,4:14:99:407,0,1133	0/1:12,6:14:99:668,0,523	0/1:19,10:26:99:709,0,620	0/0:30,0:29:66.21:0,66,4488	0/0:9,0:10:5.99:0,6,50	0/1:14,0:13:99:180,0,366	0/0:14,0:8:11.03:0,11,153	1/1:10,0:14:21.04:446,21,0	0/0:18,0:14:1.96:0,2,15	0/1:14,5:19:99:222,0,646	0/1:17,5:21:99:194,0,966	0/0:25,3:23:2.95:0,3,350	0/1:5,0:6:3.09:3,0,8	0/1:28,0:30:99:904,0,364	0/1:27,0:27:99:430,0,260	1/1:21,0:21:15.46:627,15,0
chr10	109602536	.	C	CTGTGTGTGTG	6669.08	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=1.672;DP=476;FS=7.699;HRun=0;HaplotypeScore=163.3680;InbreedingCoeff=0.7019;MQ=67.80;MQ0=15;MQRankSum=-6.722;QD=23.08;ReadPosRankSum=0.157;VQSLOD=3.7905;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:3.90:87,4,0	0/0:10,0:10:20.99:0,21,629	0/0:32,0:19:35.59:0,36,727	0/0:30,0:20:41.57:0,42,938	0/0:11,0:13:4.09:0,4,326	0/0:15,0:15:14.88:0,15,232	0/0:21,0:20:7.08:0,7,380	1/1:30,0:27:66.21:1771,66,0	0/0:12,0:11:18.03:0,18,251	0/0:22,0:21:48.12:0,48,1374	0/0:7,0:7:14.97:0,15,394	1/1:16,0:15:7.69:142,8,0	1/1:18,0:17:23.57:196,24,0	1/1:19,0:18:20.03:189,20,0	0/1:20,0:18:7.91:8,0,66	0/0:22,0:22:60.16:0,60,1641	1/1:8,0:7:3.01:89,3,0	1/1:11,0:10:9.03:204,9,0	1/1:8,0:6:18.06:506,18,0	1/1:10,0:9:12.04:451,12,0	1/1:8,14:23:4.50:52,5,0	1/1:12,0:12:8.85:67,9,0	1/1:9,0:9:15.01:246,15,0	1/1:12,0:10:8.40:68,8,0	1/1:2,0:22:8.87:145,9,0	0/1:24,0:23:44.93:1319,0,45	1/1:10,0:9:15.05:470,15,0	1/1:11,0:9:18.06:661,18,0
chr10	109602581	.	TTC	T	3895.22	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.549;DP=624;FS=0.837;HRun=0;HaplotypeScore=117.9773;InbreedingCoeff=0.9959;MQ=73.34;MQ0=6;MQRankSum=-1.399;QD=28.64;ReadPosRankSum=2.626;VQSLOD=5.3850;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:66.22:0,66,1068	0/0:13,0:13:36.12:0,36,612	0/0:43,0:34:42.77:0,43,717	0/0:60,0:47:59.57:0,60,1191	0/0:14,0:14:42.14:0,42,671	0/0:15,0:14:42.14:0,42,713	0/0:23,0:22:57.20:0,57,969	0/0:31,1:31:36.27:0,36,1172	0/0:18,0:18:51.15:0,51,825	0/0:26,0:26:69.24:0,69,1153	0/0:5,0:5:15.05:0,15,255	1/1:12,16:25:57.11:704,57,0	1/1:7,8:14:30.09:377,30,0	1/1:5,16:20:57.15:712,57,0	1/1:7,17:21:60.12:743,60,0	0/0:25,0:25:69.21:0,69,1121	0/0:19,0:19:45.63:0,46,766	0/0:16,0:15:42.14:0,42,714	0/0:14,0:14:39.12:0,39,612	0/0:14,0:14:39.13:0,39,656	0/0:39,0:39:78.26:0,78,1296	1/1:2,11:13:36.11:468,36,0	1/1:3,8:11:27.09:350,27,0	1/1:5,19:20:42.14:541,42,0	0/0:23,0:23:33.11:0,33,561	0/0:31,0:31:78.26:0,78,1304	0/0:19,0:18:47.90:0,48,762	0/0:10,0:10:21.07:0,21,335
chr10	109602869	.	CGG	C	15533.18	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=2.650;DP=610;FS=4.985;HRun=8;HaplotypeScore=100.4194;InbreedingCoeff=0.9798;MQ=79.49;MQ0=2;MQRankSum=-6.384;QD=29.87;ReadPosRankSum=5.166;VQSLOD=4.7397;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:84.26:1024,84,0	0/0:5,0:5:9.03:0,9,151	0/0:15,0:15:26.34:0,26,556	0/0:23,0:23:55.58:0,56,829	1/1:0,13:13:36.11:436,36,0	1/1:2,22:24:57.18:695,57,0	1/1:2,35:37:96.30:1170,96,0	1/1:4,18:22:48.12:573,48,0	1/1:0,18:17:48.15:585,48,0	0/0:16,0:16:42.10:0,42,668	0/0:10,0:10:24.06:0,24,376	1/1:2,30:32:78.24:950,78,0	1/1:3,21:24:54.17:652,54,0	1/1:2,21:23:54.16:658,54,0	1/1:2,29:31:84.26:1017,84,0	0/0:21,0:21:54.18:0,54,889	1/1:5,37:42:99:1280,105,0	1/1:1,15:16:45.14:549,45,0	1/1:3,20:23:60.19:725,60,0	1/1:0,8:8:21.06:251,21,0	1/1:3,54:56:99:1792,147,0	1/1:3,15:18:33.05:385,33,0	1/1:2,5:7:15.05:183,15,0	1/1:3,31:34:93.12:1112,93,0	1/1:1,10:11:15.04:183,15,0	1/1:2,10:12:30.09:364,30,0	1/1:4,20:24:51.15:622,51,0	1/1:0,11:11:27.08:329,27,0
chr10	109603630	.	AG	A	6204.75	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=17.741;DP=714;FS=8.308;HRun=2;HaplotypeScore=81.6887;InbreedingCoeff=0.9987;MQ=72.24;MQ0=0;MQRankSum=-0.743;QD=35.46;ReadPosRankSum=1.701;VQSLOD=5.1891;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,2181	0/0:8,0:8:24.08:0,24,359	0/0:13,0:13:39.13:0,39,558	0/0:10,0:10:30.10:0,30,425	0/0:24,0:24:69.23:0,69,1034	0/0:16,0:16:48.16:0,48,718	0/0:27,0:28:81.27:0,81,1212	0/0:25,0:25:70.79:0,71,1075	0/0:24,0:24:66.22:0,66,989	0/0:44,0:44:99:0,126,1879	0/0:23,0:23:63.17:0,63,919	1/1:0,24:24:66.21:855,66,0	1/1:0,22:22:60.19:775,60,0	1/1:0,23:23:63.20:816,63,0	1/1:0,38:38:99:1285,100,0	0/0:32,0:32:96.31:0,96,1419	0/0:42,0:42:99:0,123,1800	0/0:34,0:34:96.32:0,96,1434	0/0:23,0:23:63.20:0,63,922	0/0:17,0:17:51.15:0,51,722	0/0:37,0:37:99:0,111,1622	1/1:1,25:26:75.23:958,75,0	1/1:0,9:9:21.07:271,21,0	1/1:0,33:33:96.31:1245,96,0	0/0:18,0:18:54.18:0,54,809	0/0:30,0:30:90.29:0,90,1329	0/0:30,0:30:84.28:0,84,1259	0/0:11,0:11:33.11:0,33,495
chr10	109604323	.	C	CCA	19296.72	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-9.600;DP=462;FS=3.320;HRun=0;HaplotypeScore=51.2021;InbreedingCoeff=0.8715;MQ=85.75;MQ0=0;MQRankSum=-5.247;QD=47.53;ReadPosRankSum=4.200;VQSLOD=6.2262;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:75.26:1448,75,0	0/0:9,0:9:24.08:0,24,367	0/0:14,0:14:26.47:0,26,455	0/1:16,0:16:19.84:20,0,347	1/1:1,12:13:30.10:548,30,0	1/1:0,14:14:33.11:637,33,0	1/1:3,30:33:81.25:1528,81,0	1/1:2,13:15:39.10:717,39,0	1/1:2,9:11:27.09:517,27,0	0/0:11,0:11:30.10:0,30,459	0/0:8,0:8:24.08:0,24,367	1/1:1,20:21:45.15:869,45,0	1/1:0,12:12:30.10:578,30,0	1/1:2,15:17:39.09:714,39,0	1/1:1,26:28:75.26:1446,75,0	0/0:14,0:14:42.14:0,42,643	1/1:0,32:33:84.29:1620,84,0	1/1:0,30:30:87.30:1678,87,0	1/1:0,20:20:60.21:1148,60,0	1/1:2,7:9:18.06:347,18,0	1/1:2,19:21:48.16:927,48,0	1/1:1,6:7:12.04:232,12,0	1/1:0,4:4:12.04:232,12,0	1/1:0,13:13:33.11:637,33,0	1/1:1,7:8:21.07:406,21,0	1/1:1,20:21:63.21:1194,63,0	1/1:1,14:15:42.14:811,42,0	1/1:1,19:20:54.19:1043,54,0
chr10	109606089	.	C	CT	3454.81	PASS	AB=0.923;AC=43;AF=0.796;AN=54;BaseQRankSum=0.915;DP=290;FS=19.684;HRun=1;HaplotypeScore=81.4277;InbreedingCoeff=0.7718;MQ=66.04;MQ0=1;MQRankSum=-3.156;QD=13.87;ReadPosRankSum=-0.254;VQSLOD=1.5408;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,1:15:34.17:228,34,0	0/0:2,0:2:5.69:0,6,51	0/0:8,0:7:15.61:0,16,129	0/0:12,0:5:8.87:0,9,99	1/1:9,0:9:11.98:99,12,0	1/1:8,0:8:20.68:148,21,0	1/1:11,0:11:25.87:152,26,0	1/1:21,1:22:65.23:517,65,0	1/1:9,0:9:17.29:116,17,0	./.	0/0:6,0:6:12:0,12,131	1/1:10,0:10:18.34:139,18,0	1/1:4,0:4:11.82:86,12,0	1/1:10,0:10:20.20:161,20,0	1/1:11,0:11:8.01:61,8,0	0/0:12,0:12:33.43:0,33,351	1/1:14,6:20:39.38:280,39,0	1/1:9,0:9:20.08:117,20,0	1/1:15,0:15:38.38:253,38,0	0/1:11,1:12:0.47:58,0,0	1/1:12,3:15:15.88:108,16,0	1/1:7,0:7:2.90:16,3,0	1/1:6,0:6:8.91:63,9,0	1/1:13,1:14:35.83:305,36,0	1/1:12,0:12:14.43:123,14,0	1/1:9,2:11:23.89:193,24,0	1/1:14,1:15:17.15:194,17,0	1/1:4,0:4:5.06:37,5,0
chr10	109606093	.	CCCCCTCA	C	5041.50	PASS	AB=1.000;AC=44;AF=0.815;AN=54;BaseQRankSum=3.864;DP=279;FS=16.338;HRun=0;HaplotypeScore=91.9524;InbreedingCoeff=0.5128;MQ=65.88;MQ0=1;MQRankSum=-5.497;QD=20.09;ReadPosRankSum=2.016;VQSLOD=3.1516;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,1:14:30.03:456,30,0	0/0:2,0:2:3.90:0,4,71	0/0:9,0:8:1.97:0,2,280	0/0:11,0:4:9.89:0,10,116	0/1:6,0:6:0:0,0,0	1/1:6,0:6:12:167,12,0	1/1:14,0:14:17.95:221,18,0	1/1:20,1:21:29.89:397,30,0	1/1:9,0:9:9.03:167,9,0	./.	0/0:4,0:4:6.01:0,6,106	1/1:8,0:8:8.97:62,9,0	1/1:4,0:4:2.97:20,3,0	1/1:10,0:10:13.62:100,14,0	1/1:12,0:12:1.25:19,1,0	0/1:12,0:12:41.37:41,0,331	1/1:19,1:20:33.07:470,33,0	1/1:9,0:9:21.07:358,21,0	1/1:15,0:15:39.04:577,39,0	1/1:10,1:11:24.08:406,24,0	1/1:14,0:14:15.03:214,15,0	1/1:6,0:6:3.01:38,3,0	1/1:7,0:7:2.98:9,3,0	1/1:15,0:15:32.38:275,32,0	1/1:12,0:12:6.65:56,7,0	1/1:9,0:9:21.03:310,21,0	1/1:13,0:13:30.10:479,30,0	1/1:4,0:4:12.04:198,12,0
chr10	109606094	.	CCCCTCA	C	6299.04	PASS	AB=1.000;AC=46;AF=0.852;AN=54;BaseQRankSum=2.833;DP=274;FS=16.296;HRun=0;HaplotypeScore=81.7467;InbreedingCoeff=0.3328;MQ=65.99;MQ0=1;MQRankSum=-5.215;QD=24.51;ReadPosRankSum=2.049;VQSLOD=3.3123;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,11:14:30.03:544,30,0	0/1:2,0:2:6.46:6,0,43	0/1:9,0:8:17.50:18,0,242	0/0:11,0:4:8.93:0,9,85	0/1:6,0:6:0:0,0,0	1/1:6,0:6:12.01:170,12,0	1/1:14,0:14:18.06:265,18,0	1/1:13,8:21:29.89:426,30,0	1/1:8,0:8:9.03:151,9,0	./.	0/0:4,0:4:6.01:0,6,93	1/1:8,0:8:12.46:105,12,0	1/1:3,0:3:3.01:38,3,0	1/1:10,0:10:16.31:163,16,0	1/1:12,0:12:1.65:36,2,0	0/1:12,0:12:44.77:45,0,265	1/1:8,12:20:33.06:581,33,0	1/1:2,7:9:21.07:454,21,0	1/1:6,9:15:39.06:705,39,0	1/1:4,7:11:24.08:516,24,0	1/1:5,8:13:15.03:290,15,0	1/1:6,0:6:3.01:38,3,0	1/1:6,0:6:3.78:16,4,0	1/1:14,0:14:35.86:386,36,0	1/1:12,0:12:6.60:56,7,0	1/1:4,5:9:21.05:385,21,0	1/1:3,10:13:30.10:638,30,0	1/1:0,4:4:12.04:266,12,0
chr10	109606095	.	CCCTCA	C	5356.18	PASS	AB=1.000;AC=46;AF=0.852;AN=54;BaseQRankSum=2.717;DP=267;FS=14.358;HRun=0;HaplotypeScore=78.6512;InbreedingCoeff=0.4221;MQ=66.17;MQ0=1;MQRankSum=-4.871;QD=21.42;ReadPosRankSum=1.822;VQSLOD=3.1169;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:30.03:423,30,0	0/1:2,0:2:2.66:3,0,38	0/1:9,0:8:0.22:0,0,211	0/0:11,0:4:5.99:0,6,51	0/1:6,0:6:0:0,0,0	1/1:5,0:5:12.04:187,12,0	1/1:12,1:13:18.06:262,18,0	1/1:20,0:20:30.38:350,30,0	1/1:9,0:9:9.03:147,9,0	./.	0/0:4,0:4:6.01:0,6,79	1/1:7,1:8:14.25:147,14,0	1/1:1,0:1:3.01:38,3,0	1/1:10,0:10:16.80:230,17,0	1/1:11,0:11:1.68:37,2,0	0/1:12,0:12:75.62:76,0,190	1/1:20,0:20:33.06:451,33,0	1/1:9,0:9:21.07:328,21,0	1/1:13,2:15:39.03:538,39,0	1/1:11,0:11:24.08:376,24,0	1/1:13,0:13:15.03:213,15,0	1/1:6,0:6:2.95:38,3,0	1/1:6,0:6:3.01:30,3,0	1/1:14,0:14:35.99:476,36,0	1/1:11,0:11:6.65:56,7,0	1/1:8,1:9:21.05:295,21,0	1/1:12,0:12:30.10:466,30,0	1/1:4,0:4:12.04:189,12,0
chr10	109606097	.	CTCA	C	4788.77	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=1.799;DP=245;FS=11.185;HRun=0;HaplotypeScore=67.1766;InbreedingCoeff=0.2379;MQ=65.59;MQ0=1;MQRankSum=-5.575;QD=19.87;ReadPosRankSum=1.684;VQSLOD=3.5237;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,1:13:30.02:342,30,0	0/1:2,0:2:12.77:22,0,13	0/1:8,0:7:7.34:7,0,141	0/1:11,0:4:3.06:3,0,34	1/1:1,3:4:0.47:1,0,0	1/1:3,2:5:12.04:188,12,0	1/1:2,9:11:18.06:241,18,0	1/1:12,1:13:29.90:291,30,0	1/1:1,7:8:9.03:131,9,0	1/1:3,0:3:0.47:1,0,0	0/0:4,0:4:6:0,6,53	1/1:6,2:8:14.51:194,15,0	1/1:0,1:1:3.01:38,3,0	1/1:9,0:10:16.84:278,17,0	1/1:1,9:10:2.15:37,2,0	0/1:12,0:12:80.57:93,0,81	1/1:19,0:19:33.05:371,33,0	1/1:9,0:9:21.06:249,21,0	1/1:14,0:14:39.04:426,39,0	1/1:10,1:11:24.07:283,24,0	1/1:11,0:11:15.03:167,15,0	1/1:0,6:6:3.01:38,3,0	1/1:2,2:5:2.94:51,3,0	1/1:11,2:13:36.01:538,36,0	1/1:0,10:10:5.97:54,6,0	1/1:9,0:9:21.04:237,21,0	1/1:11,0:11:30.09:363,30,0	1/1:4,0:4:12.04:143,12,0
chr10	109606107	.	C	CA	1396.79	PASS	AB=0.980;AC=29;AF=0.518;AN=56;BaseQRankSum=1.541;DP=295;FS=5.770;HRun=0;HaplotypeScore=96.2661;InbreedingCoeff=0.6747;MQ=63.22;MQ0=1;MQRankSum=-3.629;QD=6.95;ReadPosRankSum=3.244;VQSLOD=3.0346;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:32.89:201,33,0	0/0:3,0:3:5.98:0,6,47	0/0:9,0:8:12.77:0,13,134	0/0:9,0:2:2.11:0,2,36	0/0:7,0:7:8.98:0,9,82	0/0:7,0:7:11.12:0,11,82	0/0:13,0:13:14.70:0,15,98	1/1:14,0:14:31.21:246,31,0	0/0:8,0:8:8.83:0,9,58	0/0:8,0:8:12.01:0,12,118	0/0:3,0:3:3.01:0,3,39	0/1:15,1:16:0.55:40,0,1	1/1:11,0:11:5.96:44,6,0	0/0:8,0:8:0.47:0,0,1	0/0:8,1:9:0.46:0,0,1	0/0:10,0:10:16.12:0,16,208	1/1:16,0:16:29.90:161,30,0	1/1:13,0:13:11.73:132,12,0	1/1:19,0:19:9.33:120,9,0	1/1:19,0:19:30.55:165,31,0	1/1:11,0:11:5.07:47,5,0	1/1:3,1:4:2.92:17,3,0	0/1:11,0:11:0:0,0,0	1/1:8,1:9:5.95:54,6,0	0/1:6,0:6:0.21:0,0,0	1/1:15,0:15:20.29:117,20,0	1/1:13,0:13:30.97:163,31,0	1/1:6,0:6:11.94:66,12,0
chr10	109606224	.	GCA	G	3662.10	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.096;DP=516;FS=4.637;HRun=0;HaplotypeScore=66.2387;InbreedingCoeff=0.9892;MQ=73.96;MQ0=0;MQRankSum=1.072;QD=32.41;ReadPosRankSum=3.621;VQSLOD=5.6482;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.27:0,84,1448	0/0:7,0:7:17.99:0,18,256	0/0:12,0:12:33.11:0,33,580	0/0:10,0:9:24.08:0,24,420	0/0:12,0:12:27.09:0,27,477	0/0:23,0:23:57.18:0,57,976	0/0:29,0:29:84.27:0,84,1440	0/0:18,0:18:45.14:0,45,768	0/0:16,0:16:48.16:0,48,851	0/0:11,0:11:27.09:0,27,477	0/0:13,0:13:33.10:0,33,552	1/1:1,17:18:48.16:659,48,0	1/1:2,7:9:18.06:247,18,0	1/1:1,16:17:45.15:617,45,0	1/1:2,17:19:42.03:576,42,0	0/0:14,0:14:39.12:0,39,664	0/0:34,0:34:96.31:0,96,1666	0/0:26,0:26:72.23:0,72,1249	0/0:31,0:31:90.25:0,90,1479	0/0:6,0:6:15.03:0,15,238	0/0:66,0:66:99:0,184,3092	1/1:4,8:12:24.08:329,24,0	1/1:0,7:7:15.05:206,15,0	1/1:0,31:31:75.25:1029,75,0	0/0:14,0:14:36.09:0,36,572	0/0:12,0:12:33.10:0,33,557	0/0:11,0:11:33.11:0,33,579	0/0:8,0:8:21.07:0,21,369
chr10	109606665	.	CG	C	2171.77	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=3.111;DP=276;FS=8.252;HRun=2;HaplotypeScore=168.1186;InbreedingCoeff=0.6591;MQ=59.75;MQ0=0;MQRankSum=-4.670;QD=8.23;ReadPosRankSum=2.674;VQSLOD=0.8674;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:10:15.82:68,16,0	1/1:0,4:4:8.22:36,8,0	0/0:5,0:5:5.27:0,5,60	0/0:7,0:7:16.65:0,17,105	1/1:0,9:9:7.97:39,8,0	1/1:1,9:10:24.52:111,25,0	1/1:0,10:10:26.21:102,26,0	1/1:4,12:16:31.09:170,31,0	1/1:0,13:13:32.32:140,32,0	1/1:0,6:6:17.12:87,17,0	1/1:0,9:9:13.26:59,13,0	1/1:1,7:8:18.34:71,18,0	1/1:0,8:8:16.94:73,17,0	1/1:2,11:13:26.24:103,26,0	1/1:0,16:16:36.97:153,37,0	1/1:1,10:11:26.98:112,27,0	1/1:4,13:17:30.19:145,30,0	1/1:5,8:13:14.24:76,14,0	1/1:1,8:9:23.54:152,24,0	1/1:0,7:7:10.83:49,11,0	1/1:4,7:11:2.50:9,2,0	1/1:0,9:9:13.19:53,13,0	1/1:2,6:8:13.11:63,13,0	1/1:0,12:12:10.19:44,10,0	1/1:1,10:11:15.65:88,16,0	1/1:1,10:11:24.30:117,24,0	1/1:3,9:12:27.99:158,28,0	1/1:0,1:1:2.84:14,3,0
chr10	109606669	.	T	TA	3885.82	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.128;DP=267;FS=6.461;HRun=1;HaplotypeScore=163.3952;InbreedingCoeff=0.8198;MQ=62.45;MQ0=0;MQRankSum=-5.195;QD=15.30;ReadPosRankSum=3.048;VQSLOD=3.7504;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:17.35:94,17,0	1/1:0,4:4:8.82:54,9,0	0/0:7,0:7:17.86:0,18,131	0/0:6,0:6:17.83:0,18,121	1/1:1,9:10:14.48:85,14,0	1/1:1,9:10:26.37:157,26,0	1/1:1,10:11:32.07:184,32,0	1/1:4,12:16:44.57:352,45,0	1/1:1,13:14:35.06:204,35,0	1/1:3,6:9:23.84:213,24,0	1/1:0,9:9:23.29:137,23,0	1/1:0,7:7:20.36:115,20,0	1/1:0,7:8:22:122,22,0	1/1:1,11:12:35.04:206,35,0	1/1:0,16:16:43.68:250,44,0	1/1:0,10:10:29.30:174,29,0	1/1:0,13:13:32.04:186,32,0	1/1:0,8:8:14.77:97,15,0	1/1:3,8:11:26.95:228,27,0	1/1:2,7:9:14.71:93,15,0	1/1:0,7:7:11.78:75,12,0	1/1:0,9:9:23.47:143,23,0	1/1:1,6:7:20.14:111,20,0	1/1:0,12:12:11.40:57,11,0	1/1:1,10:11:27.08:163,27,0	1/1:1,10:11:29.39:192,29,0	1/1:1,9:10:26.55:176,27,0	1/1:0,1:1:2.97:20,3,0
chr10	109606720	.	G	GA	4955.76	PASS	AB=0.667;AC=49;AF=0.980;AN=50;BaseQRankSum=1.579;DP=194;FS=0.000;HRun=4;HaplotypeScore=154.6397;InbreedingCoeff=-0.0415;MQ=38.46;MQ0=0;MQRankSum=-1.732;QD=25.81;ReadPosRankSum=1.223;VQSLOD=3.1899;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:11.83:114,12,0	1/1:2,5:7:15.05:205,15,0	0/1:1,1:1:9.03:35,0,9	./.	1/1:5,7:12:18.03:223,18,0	1/1:0,7:7:20.85:236,21,0	1/1:1,3:4:8.92:98,9,0	1/1:5,8:13:24.08:328,24,0	1/1:3,4:7:11.93:139,12,0	1/1:4,10:14:33.11:447,33,0	1/1:1,8:9:14.91:179,15,0	1/1:0,5:5:15.05:205,15,0	1/1:4,10:14:24.08:325,24,0	1/1:1,7:8:15.05:204,15,0	1/1:3,8:11:17.84:195,18,0	1/1:2,1:3:5.98:61,6,0	1/1:0,11:11:18.06:245,18,0	1/1:0,4:4:12.04:159,12,0	1/1:1,2:3:6.02:82,6,0	1/1:1,6:7:17.60:134,18,0	./.	1/1:3,6:9:14.85:156,15,0	1/1:0,7:7:20.65:190,21,0	./.	1/1:0,12:12:33:425,33,0	1/1:2,7:9:21.07:287,21,0	1/1:2,4:6:12.04:163,12,0	1/1:1,2:3:9.03:123,9,0
chr10	109606749	.	GT	G	1596.61	PASS	AB=0.626;AC=45;AF=0.900;AN=50;BaseQRankSum=2.649;DP=124;FS=13.811;HRun=3;HaplotypeScore=137.2594;InbreedingCoeff=0.1595;MQ=36.26;MQ0=0;MQRankSum=-0.269;QD=12.98;ReadPosRankSum=0.283;VQSLOD=1.5951;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:2.98:21,3,0	1/1:0,6:6:12.32:103,12,0	./.	0/0:1,0:1:3:0,3,27	1/1:1,7:8:14.27:79,14,0	1/1:0,4:4:10.41:48,10,0	1/1:0,2:2:5.81:47,6,0	1/1:0,4:4:11.87:110,12,0	1/1:0,2:2:5.91:53,6,0	1/1:0,12:12:28.31:173,28,0	1/1:0,9:9:15.58:96,16,0	1/1:0,4:4:11.43:58,11,0	1/1:0,8:8:14.87:108,15,0	1/1:0,4:4:5.65:27,6,0	0/1:1,3:4:5.82:29,0,6	1/1:0,2:2:4.96:22,5,0	1/1:1,7:8:16.18:93,16,0	1/1:0,4:4:9.03:104,9,0	1/1:0,1:1:3.01:37,3,0	1/1:0,2:2:5.82:35,6,0	./.	0/1:1,4:5:3.79:4,0,4	1/1:0,6:6:11.55:77,12,0	./.	1/1:0,13:13:30.85:189,31,0	1/1:0,7:7:16.27:108,16,0	0/1:2,1:3:3.44:36,0,3	1/1:1,2:3:7.13:39,7,0
chr10	109606859	.	T	TGAGGATGGGGGATGGGG	1220.54	PASS	AB=0.792;AC=16;AF=0.889;AN=18;BaseQRankSum=-1.085;DP=26;FS=7.104;HRun=0;HaplotypeScore=39.4720;MQ=188.83;MQ0=0;MQRankSum=-0.628;QD=48.82;ReadPosRankSum=-1.656;VQSLOD=0.7947;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:5,1:8:4.59:585,0,5	0/1:5,0:6:6.49:442,0,6	1/1:1,0:1:3.01:68,3,0	./.	1/1:1,0:1:2.97:20,3,0	1/1:3,0:3:8.94:68,9,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:2,0:2:5.93:40,6,0	1/1:2,0:2:2.99:23,3,0	./.	./.	./.	./.	./.	./.	./.	1/1:1,0:1:3:28,3,0	1/1:1,0:1:2.99:24,3,0	./.
chr10	109607145	.	TG	T	5131.16	PASS	AB=0.929;AC=31;AF=0.554;AN=56;BaseQRankSum=5.268;DP=367;FS=6.555;HRun=9;HaplotypeScore=41.0797;InbreedingCoeff=0.8865;MQ=81.89;MQ0=0;MQRankSum=-1.703;QD=21.56;ReadPosRankSum=0.718;VQSLOD=5.1230;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,23:29:66.03:604,66,0	0/0:3,0:3:3.01:0,3,35	0/0:13,1:15:11.02:0,11,129	0/1:12,1:11:6.10:6,0,125	1/1:0,7:7:18.01:165,18,0	1/1:3,13:16:33.01:302,33,0	1/1:2,21:23:57.03:522,57,0	1/1:2,18:20:51.02:467,51,0	1/1:3,8:11:21:192,21,0	0/0:9,0:9:15.03:0,15,162	0/0:10,0:10:24.07:0,24,277	0/0:21,0:21:57.17:0,57,658	0/0:12,0:12:33.10:0,33,379	0/0:10,0:10:23.59:0,24,276	0/0:9,0:9:24.06:0,24,268	0/0:6,0:6:15.03:0,15,164	1/1:2,21:23:60.03:549,60,0	1/1:3,23:26:66.03:604,66,0	1/1:1,10:11:30.01:275,30,0	1/1:0,5:5:14.97:130,15,0	1/1:2,22:24:66.03:603,66,0	0/0:5,0:5:12.03:0,12,137	0/0:4,0:4:9.03:0,9,102	0/0:25,0:25:63.15:0,63,706	1/1:1,5:6:15.01:137,15,0	1/1:2,6:8:18:165,18,0	1/1:1,7:8:21:192,21,0	1/1:0,8:8:24.01:220,24,0
chr10	109609861	.	T	TG	2530.19	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-6.597;DP=673;FS=6.341;HRun=8;HaplotypeScore=68.6847;InbreedingCoeff=0.9840;MQ=86.66;MQ0=1;MQRankSum=-1.982;QD=22.59;ReadPosRankSum=1.346;VQSLOD=4.2256;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:90.03:0,90,818	0/0:9,0:9:27.01:0,27,247	0/0:23,0:22:43.56:0,44,392	0/0:29,0:28:65.19:0,65,573	1/1:4,22:27:60.17:685,60,0	1/1:3,8:11:18.05:208,18,0	1/1:6,20:26:29.70:595,30,0	0/0:29,0:29:66:0,66,596	1/1:4,26:30:75.15:836,75,0	0/0:22,0:22:50.99:0,51,457	0/0:7,0:7:9:0,9,82	0/0:32,0:32:74.98:0,75,676	0/0:21,0:21:57.01:0,57,518	0/0:32,0:32:72.06:0,72,724	0/0:26,0:26:65.97:0,66,595	0/0:29,0:29:50.47:0,50,627	0/0:39,0:39:99:0,108,983	0/0:28,0:27:66:0,66,597	0/0:19,0:19:36:0,36,329	0/0:17,0:17:45:0,45,405	0/0:40,0:40:99:0,99,901	0/0:15,0:15:30.01:0,30,275	0/0:15,0:15:38.98:0,39,349	0/0:34,0:34:84:0,84,761	1/1:2,16:18:33.10:381,33,0	0/0:25,0:25:56.99:0,57,510	0/0:21,0:21:60.01:0,60,544	0/0:13,0:13:39:0,39,349
chr10	109612206	.	GCACACA	G	964.99	PASS	AB=0.814;AC=15;AF=0.288;AN=52;BaseQRankSum=5.323;DP=651;FS=16.598;HRun=0;HaplotypeScore=133.9510;InbreedingCoeff=0.7030;MQ=56.62;MQ0=12;MQRankSum=-4.713;QD=4.73;ReadPosRankSum=-1.174;VQSLOD=1.1044;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:47.52:0,48,1091	0/0:6,0:7:12.04:0,12,290	0/0:27,0:4:0.47:0,0,1	./.	0/0:18,0:18:9.03:0,9,200	0/0:17,0:16:14.54:0,15,346	0/0:33,0:33:29.59:0,30,737	./.	0/0:10,0:11:9.50:0,10,183	0/0:17,0:23:29.99:0,30,648	0/0:12,0:17:18.05:0,18,352	1/1:25,5:31:8.86:164,9,0	1/1:17,6:24:17.91:328,18,0	1/1:19,12:31:11.82:222,12,0	1/1:17,11:29:15.80:258,16,0	0/0:28,0:32:45.14:0,45,1055	0/1:27,0:35:47.23:47,0,423	0/0:18,0:25:30.07:0,30,655	0/0:17,0:17:11.99:0,12,199	0/0:13,0:13:12.04:0,12,297	0/0:52,0:54:35.22:0,35,611	1/1:15,5:20:3.01:60,3,0	1/1:8,1:9:3.01:47,3,0	1/1:22,2:24:0.47:1,0,0	0/0:21,0:21:8.09:0,8,192	0/0:13,0:13:16.44:0,16,318	0/0:17,0:21:29.58:0,30,961	0/0:16,0:18:28.34:0,28,615
chr10	109612407	.	T	TC	5404.34	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-4.820;DP=598;FS=3.042;HRun=9;HaplotypeScore=68.4606;InbreedingCoeff=0.9709;MQ=82.18;MQ0=0;MQRankSum=-1.135;QD=17.27;ReadPosRankSum=-0.051;VQSLOD=5.0594;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,25:39:42.11:465,42,0	0/0:11,0:11:26.98:0,27,231	0/0:28,1:24:18.78:0,19,214	0/0:18,0:19:25.39:0,25,176	1/1:7,0:21:31.51:178,32,0	1/1:3,0:19:39.90:204,40,0	1/1:7,1:16:28.08:160,28,0	1/1:8,12:20:14.05:296,14,0	1/1:0,0:12:31.28:157,31,0	0/0:21,0:21:56.98:0,57,493	0/0:15,0:15:44.98:0,45,387	0/0:26,0:26:71.84:0,72,610	0/0:21,0:21:50.92:0,51,433	0/0:18,0:18:38.93:0,39,329	0/0:26,0:26:65.96:0,66,569	0/0:34,0:35:91.91:0,92,766	1/1:5,19:24:48.13:530,48,0	1/1:1,16:17:13.49:373,13,0	1/1:4,16:20:4.85:463,5,0	1/1:3,15:19:38.99:399,39,0	1/1:4,21:25:54.15:597,54,0	0/0:22,0:22:53.98:0,54,469	0/0:20,0:20:53.02:0,53,449	0/0:22,0:22:44.95:0,45,386	1/1:6,0:17:22.71:114,23,0	1/1:4,22:26:13.04:561,13,0	1/1:3,22:26:60:644,60,0	1/1:1,10:11:24.06:265,24,0
chr10	109614302	.	CGAGAGAGAGAGTGAGAGA	C	5197.77	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-2.205;DP=676;FS=2.657;HRun=0;HaplotypeScore=290.1027;InbreedingCoeff=0.0353;MQ=61.56;MQ0=7;MQRankSum=-0.867;QD=10.13;ReadPosRankSum=-1.656;VQSLOD=3.4234;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:46,0:46:1.29:2,1,0	0/0:11,0:11:21:0,21,569	0/0:33,0:13:7.60:0,8,86	0/1:44,0:20:9.53:10,0,111	0/1:24,0:24:99:105,0,214	0/1:20,0:20:45.45:45,0,692	0/1:30,0:30:72.72:73,0,1408	0/1:21,0:21:99:144,0,238	0/1:21,0:21:61.65:62,0,671	0/0:30,0:30:72.20:0,72,3446	0/0:21,0:21:26.41:0,26,1462	1/1:3,23:28:27.09:1101,27,0	1/1:5,13:19:8.48:317,8,0	1/1:24,4:30:50.74:1004,51,0	1/1:6,21:27:17.99:722,18,0	0/0:40,0:40:99:0,99,5514	0/1:27,0:26:99:108,0,815	0/0:11,0:11:9.03:0,9,183	0/1:13,0:12:58.83:59,0,171	0/1:19,0:19:7.70:8,0,168	0/1:17,0:17:48.35:48,0,431	1/1:13,1:15:33.06:504,33,0	1/1:20,0:23:29.46:303,29,0	1/1:26,1:28:24.08:383,24,0	0/1:19,0:18:53.73:54,0,966	0/1:30,0:30:99:127,0,399	0/0:17,0:17:15.05:0,15,299	0/1:11,0:11:18.38:18,0,561
chr10	109614304	.	AGAGAGAGAGT	A	5609.06	PASS	AB=0.994;AC=37;AF=0.661;AN=56;BaseQRankSum=-0.194;DP=660;FS=8.220;HRun=0;HaplotypeScore=206.9204;InbreedingCoeff=0.3624;MQ=61.64;MQ0=7;MQRankSum=-1.992;QD=11.66;ReadPosRankSum=2.531;VQSLOD=3.0299;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:46,0:46:0.71:1,1,0	0/0:12,0:12:21:0,21,299	0/0:31,0:11:1.11:0,1,67	0/0:43,0:20:4.52:0,5,120	0/1:23,1:24:30.66:168,0,31	0/1:19,0:19:86.40:86,0,206	0/1:31,0:31:99:203,0,438	1/1:21,0:21:9.53:207,10,0	0/1:20,0:20:8.83:128,0,9	0/0:29,0:29:75.20:0,75,1913	0/0:22,0:22:29.99:0,30,915	1/1:28,0:28:26.96:553,27,0	1/1:18,0:18:11.73:182,12,0	1/1:26,0:26:51:666,51,0	1/1:27,0:27:17.99:346,18,0	0/0:42,0:42:99:0,101,3224	1/1:25,1:25:41.60:498,42,0	1/1:11,0:11:9.03:149,9,0	1/1:12,0:11:14.37:96,14,0	1/1:18,1:19:11.95:119,12,0	0/1:15,0:15:3.74:193,0,4	1/1:15,0:15:32.82:353,33,0	1/1:23,0:23:45.36:413,45,0	1/1:28,0:28:29.23:290,29,0	0/1:18,0:17:99:104,0,120	1/1:26,0:26:48.68:535,49,0	1/1:16,1:17:14.94:242,15,0	0/1:11,0:11:76.08:76,0,92
chr10	109614306	.	AGAGAGAGT	A	6688.19	PASS	AB=0.903;AC=39;AF=0.696;AN=56;BaseQRankSum=-0.250;DP=634;FS=26.312;HRun=0;HaplotypeScore=178.7069;InbreedingCoeff=0.5362;MQ=61.85;MQ0=7;MQRankSum=-2.946;QD=14.60;ReadPosRankSum=2.918;VQSLOD=2.6295;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:3,42:45:0:1,0,0	0/0:12,0:12:21:0,21,276	0/0:30,0:10:0.95:0,1,67	0/0:42,0:19:4.04:0,4,118	1/1:21,0:21:16.96:201,17,0	0/1:20,0:20:52.20:96,0,52	0/1:29,0:29:99:208,0,194	1/1:19,0:19:30.63:246,31,0	1/1:19,0:19:36.78:278,37,0	0/0:31,0:31:81.07:0,81,1580	0/0:23,0:23:32.96:0,33,802	1/1:27,0:27:26.96:455,27,0	1/1:15,0:15:11.73:154,12,0	1/1:25,0:25:51:596,51,0	1/1:25,0:25:17.91:276,18,0	0/0:38,0:38:99:0,100,2676	1/1:22,3:24:61.09:798,61,0	1/1:1,10:11:9.03:245,9,0	1/1:11,0:10:15:185,15,0	1/1:7,10:17:14.81:161,15,0	1/1:15,0:15:37.15:278,37,0	1/1:15,0:15:32.82:325,33,0	1/1:22,0:22:45.36:399,45,0	1/1:26,0:26:29.32:275,29,0	0/1:18,0:17:23.21:228,0,23	1/1:22,3:25:58.62:715,59,0	1/1:2,15:17:14.95:388,15,0	0/1:11,0:11:40.37:181,0,40
chr10	109614308	.	AGAGAGT	A	6431.35	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=1.406;DP=620;FS=8.784;HRun=0;HaplotypeScore=160.2841;InbreedingCoeff=0.7567;MQ=61.93;MQ0=7;MQRankSum=-1.983;QD=14.36;ReadPosRankSum=1.733;VQSLOD=3.8361;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:43:0:1,0,0	0/0:12,0:12:20.98:0,21,216	0/0:29,0:9:0.90:0,1,67	0/0:37,0:16:3.50:0,4,117	1/1:19,3:22:39:333,39,0	1/1:17,1:18:24.49:193,24,0	1/1:26,3:29:14.51:409,15,0	1/1:17,0:17:35.79:278,36,0	1/1:16,4:20:38.86:356,39,0	0/0:32,0:32:11.49:0,11,1157	0/0:23,0:23:32.68:0,33,651	1/1:27,0:27:26.96:358,27,0	1/1:15,0:15:11.70:126,12,0	1/1:24,0:24:51:526,51,0	1/1:25,0:25:16.23:206,16,0	0/0:38,0:38:80.79:0,81,2119	1/1:25,0:24:59.01:533,59,0	1/1:11,0:11:9.03:148,9,0	1/1:10,0:9:14.98:126,15,0	1/1:15,1:16:14.76:123,15,0	1/1:15,0:15:35.95:297,36,0	1/1:15,0:15:32.65:297,33,0	1/1:21,0:21:45.36:385,45,0	1/1:25,0:25:29.24:261,29,0	1/1:16,2:17:41.29:398,41,0	1/1:25,0:25:61.89:635,62,0	1/1:16,0:16:14.94:244,15,0	0/1:11,0:11:14.05:200,0,14
chr10	109614310	.	AGAGT	A	6501.13	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=1.481;DP=613;FS=4.163;HRun=0;HaplotypeScore=142.5364;InbreedingCoeff=0.6443;MQ=61.54;MQ0=9;MQRankSum=-2.503;QD=12.67;ReadPosRankSum=0.454;VQSLOD=4.2725;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:42:0.47:1,0,0	0/0:12,0:12:20.97:0,21,193	0/0:27,0:8:0.94:0,1,67	0/1:35,0:14:2.48:2,0,110	1/1:20,2:22:41.63:399,42,0	1/1:19,1:20:32.23:268,32,0	1/1:24,5:29:71.68:764,72,0	1/1:17,0:17:38:299,38,0	1/1:22,0:22:48.82:398,49,0	0/1:31,0:31:6.35:6,0,942	0/0:24,0:23:35.98:0,36,534	1/1:27,0:27:26.94:260,27,0	1/1:15,0:15:11.69:99,12,0	1/1:23,0:23:50.99:456,51,0	1/1:24,0:24:7.27:137,7,0	0/0:36,0:36:69.88:0,70,1596	1/1:27,0:26:59.51:487,60,0	1/1:11,0:11:9.03:106,9,0	1/1:7,0:6:14.98:128,15,0	1/1:14,0:14:14.76:109,15,0	1/1:15,1:16:40.20:326,40,0	1/1:15,0:15:32.65:269,33,0	1/1:20,0:20:44.89:370,45,0	1/1:24,0:24:29.37:248,29,0	1/1:17,1:17:44.03:385,44,0	1/1:25,0:25:65.94:610,66,0	1/1:16,0:16:14.94:175,15,0	0/1:13,0:12:4.14:200,0,4
chr10	109614312	.	AGT	A	5970.05	PASS	AB=0.926;AC=44;AF=0.786;AN=56;BaseQRankSum=1.930;DP=601;FS=2.820;HRun=0;HaplotypeScore=127.1752;InbreedingCoeff=0.6257;MQ=60.62;MQ0=9;MQRankSum=-3.032;QD=12.76;ReadPosRankSum=-0.386;VQSLOD=4.2395;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:42:0.17:1,0,0	0/0:12,0:12:23.56:0,24,202	0/0:27,0:7:0.97:0,1,67	0/0:34,0:13:1.53:0,2,112	1/1:22,0:22:41.94:347,42,0	1/1:18,0:18:32.96:264,33,0	1/1:30,0:30:76.09:608,76,0	1/1:15,0:15:38.85:320,39,0	1/1:22,0:22:51.32:407,51,0	0/1:24,5:29:48.66:49,0,718	0/0:22,1:22:12.86:0,13,325	1/1:26,0:26:26.45:163,26,0	1/1:15,0:15:11.56:71,12,0	1/1:22,0:22:50.41:386,50,0	1/1:23,0:23:1.32:75,1,0	0/0:37,0:37:1.51:0,2,1034	1/1:27,0:26:65.66:513,66,0	1/1:11,0:11:8.93:64,9,0	1/1:6,0:5:14.99:132,15,0	1/1:13,0:13:14.73:95,15,0	1/1:16,0:16:41.95:348,42,0	1/1:15,0:15:32.54:244,33,0	1/1:19,0:19:44.83:356,45,0	1/1:24,0:24:29.65:234,30,0	1/1:17,1:17:42.19:331,42,0	1/1:25,0:25:71.81:613,72,0	1/1:16,0:16:14.76:105,15,0	1/1:14,0:13:22.20:243,22,0
chr10	109614314	.	TGA	T	539.23	PASS	AB=0.977;AC=31;AF=0.574;AN=54;BaseQRankSum=8.193;DP=609;FS=8.931;HRun=0;HaplotypeScore=148.4656;InbreedingCoeff=0.0716;MQ=59.79;MQ0=9;MQRankSum=-5.005;QD=1.24;ReadPosRankSum=2.247;VQSLOD=1.8761;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:5.35:0,5,47	0/0:11,0:11:6:0,6,53	./.	0/0:36,0:13:3.47:0,3,25	1/1:23,0:23:3.35:13,3,0	0/1:19,0:19:1:1,0,39	0/1:30,0:30:20.02:42,0,20	0/0:16,0:16:7.53:0,8,28	1/1:22,0:22:2.13:11,2,0	0/1:28,0:28:47.55:48,0,267	0/1:21,3:23:45.35:45,0,167	1/1:25,0:25:19.89:97,20,0	1/1:15,0:15:5.68:28,6,0	1/1:21,0:21:14.06:70,14,0	0/1:22,0:22:2.05:41,0,2	0/1:34,4:38:34.42:34,0,651	1/1:26,0:25:10.43:50,10,0	0/1:12,0:12:9.51:27,0,10	0/0:7,0:6:0.46:0,0,1	1/1:14,0:14:2.76:13,3,0	0/0:17,0:17:0:0,0,0	1/1:13,0:13:5.47:27,5,0	1/1:20,0:20:2.84:14,3,0	1/1:24,0:24:2.84:14,3,0	0/1:18,0:17:13.75:18,0,14	0/1:26,0:26:30.06:30,0,31	1/1:16,0:16:13.88:65,14,0	0/0:14,0:13:3.01:0,3,36
chr10	109615029	.	A	AT	555.78	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.501;DP=812;FS=0.786;HRun=0;HaplotypeScore=79.6719;InbreedingCoeff=0.9998;MQ=89.21;MQ0=0;MQRankSum=-2.171;QD=26.47;ReadPosRankSum=1.388;VQSLOD=4.4544;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,141,1886	0/0:12,0:12:36.12:0,36,504	0/0:33,0:33:96.26:0,96,1265	0/0:31,0:31:90.30:0,90,1231	0/0:24,0:24:72.23:0,72,985	0/0:22,0:22:66.22:0,66,923	0/0:30,0:30:90.28:0,90,1225	0/0:34,0:34:99:0,99,1357	1/1:3,16:21:63.04:651,63,0	0/0:42,0:42:99:0,123,1679	0/0:23,0:23:66.19:0,66,874	0/0:23,0:23:69.21:0,69,932	0/0:26,0:26:78.26:0,78,1090	0/0:35,0:35:99:0,105,1453	0/0:26,0:26:75.24:0,75,1034	0/0:35,2:37:41.32:0,41,1382	0/0:25,0:25:75.21:0,75,995	0/0:28,0:28:84.25:0,84,1149	0/0:18,0:18:54.15:0,54,734	0/0:32,0:31:93.31:0,93,1300	0/0:47,0:47:99:0,141,1955	0/0:22,0:22:66.22:0,66,923	0/0:25,0:25:75.24:0,75,1034	0/0:35,0:35:99:0,105,1469	0/0:26,0:26:75.23:0,75,1027	0/0:39,0:39:99:0,114,1547	0/0:31,0:31:93.30:0,93,1284	0/0:15,0:15:42.14:0,42,587
chr10	109615030	.	AGC	A	527.66	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.819;DP=815;FS=0.826;HRun=0;HaplotypeScore=95.2929;InbreedingCoeff=0.9998;MQ=89.21;MQ0=0;MQRankSum=-2.578;QD=26.38;ReadPosRankSum=1.898;VQSLOD=4.8016;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,2780	0/0:13,0:13:39.12:0,39,757	0/0:34,0:34:99:0,102,1968	0/0:31,0:31:90.31:0,90,1806	0/0:23,0:23:69.24:0,69,1401	0/0:22,0:22:66.23:0,66,1341	0/0:30,0:30:90.31:0,90,1827	0/0:36,0:36:99:0,108,2161	1/1:4,16:20:57.55:623,58,0	0/0:41,0:41:99:0,123,2365	0/0:21,0:21:63.20:0,63,1230	0/0:23,0:23:69.24:0,69,1374	0/0:26,0:26:78.27:0,78,1585	0/0:35,0:35:99:0,105,2133	0/0:27,0:27:81.28:0,81,1624	0/0:35,2:37:39.35:0,39,2061	0/0:26,0:26:78.27:0,78,1571	0/0:28,0:28:84.25:0,84,1664	0/0:18,0:18:54.19:0,54,1086	0/0:32,0:31:93.32:0,93,1889	0/0:47,0:47:99:0,141,2833	0/0:23,0:23:69.22:0,69,1353	0/0:25,0:25:75.26:0,75,1522	0/0:35,0:35:99:0,105,2133	0/0:27,0:27:81.28:0,81,1626	0/0:40,0:40:99:0,117,2274	0/0:31,0:31:93.32:0,93,1872	0/0:15,0:15:42.14:0,42,853
chr10	109615281	.	ATGTGTGTGTGTGTG	A	1567.87	PASS	AB=0.941;AC=11;AF=0.196;AN=56;BaseQRankSum=5.238;DP=530;FS=18.052;HRun=0;HaplotypeScore=194.8626;InbreedingCoeff=0.6717;MQ=61.42;MQ0=3;MQRankSum=-5.626;QD=12.85;ReadPosRankSum=-0.420;VQSLOD=1.4934;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:36:36.54:0,37,803	0/0:9,0:9:18.05:0,18,707	0/0:9,0:4:0.89:0,1,2	0/0:17,0:14:2.97:0,3,20	1/1:19,4:23:2.69:71,3,0	1/1:19,4:24:9.03:292,9,0	1/1:9,9:18:2.53:67,3,0	0/0:15,0:15:3.01:0,3,64	1/1:5,11:18:23.49:864,23,0	0/0:9,0:9:14.97:0,15,405	0/0:18,0:18:12.04:0,12,760	0/0:11,0:11:15.05:0,15,938	0/0:17,0:17:17.49:0,17,760	0/0:9,0:9:15.05:0,15,597	0/0:14,0:18:36.12:0,36,1904	0/0:23,0:23:30.08:0,30,1643	0/0:24,0:27:30.09:0,30,739	0/0:23,0:25:27.07:0,27,661	0/1:15,0:16:5.59:6,0,219	0/0:12,0:17:12.03:0,12,253	0/0:45,0:49:45.10:0,45,1076	0/0:17,0:17:24.04:0,24,880	0/0:10,0:12:15.05:0,15,366	0/0:17,0:18:24.08:0,24,622	1/1:11,12:23:12.02:419,12,0	0/0:17,0:20:32.53:0,33,867	0/0:15,0:20:24.03:0,24,415	0/0:4,0:8:9.03:0,9,211
chr10	109616385	.	TAA	T	9222.42	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.113;DP=737;FS=6.484;HRun=9;HaplotypeScore=89.7284;InbreedingCoeff=0.9855;MQ=65.59;MQ0=4;MQRankSum=-0.823;QD=29.75;ReadPosRankSum=-0.189;VQSLOD=4.7686;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,44:43:99:1328,114,0	0/0:13,0:13:36.12:0,36,591	0/0:10,0:9:17.72:0,18,213	0/0:10,0:8:6.89:0,7,62	0/0:31,0:31:75.21:0,75,1201	0/0:32,0:31:93.32:0,93,1522	0/0:26,0:26:72.20:0,72,1152	1/1:5,21:26:63.14:701,63,0	0/0:20,0:18:45.12:0,45,710	0/0:38,0:38:99:0,102,1666	0/0:17,0:17:45.14:0,45,709	0/0:12,0:12:36.12:0,36,586	0/0:18,0:18:45.12:0,45,710	0/0:26,0:26:69.23:0,69,1108	0/0:25,0:25:69.24:0,69,1133	0/0:29,0:29:84.24:0,84,1341	1/1:9,32:40:99:1270,111,0	1/1:4,20:22:63.19:734,63,0	1/1:3,18:21:54.16:629,54,0	1/1:1,32:33:41.01:963,41,0	1/1:7,29:34:96.28:1117,96,0	0/0:30,0:30:84.28:0,84,1348	0/0:19,0:20:48.16:0,48,765	0/0:42,0:43:99:0,114,1791	0/0:27,0:27:63.22:0,63,1034	1/1:5,32:36:99:1189,102,0	1/1:3,26:25:66.19:769,66,0	1/1:2,16:18:45.13:524,45,0
chr10	109616551	.	G	GGTT	8224.31	PASS	AB=0.788;AC=29;AF=0.518;AN=56;BaseQRankSum=-5.648;DP=1258;FS=3.316;HRun=0;HaplotypeScore=282.1422;InbreedingCoeff=0.9149;MQ=51.73;MQ0=42;MQRankSum=-3.967;QD=14.11;ReadPosRankSum=-5.617;VQSLOD=3.2890;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:45,6:42:77.69:854,78,0	0/0:9,0:8:15.04:0,15,206	0/0:64,0:11:13.37:0,13,184	0/0:66,0:25:45.57:0,46,448	1/1:12,3:13:25.16:249,25,0	0/1:19,7:21:10.29:590,0,10	1/1:39,10:33:48.74:446,49,0	1/1:50,3:43:67.56:781,68,0	1/1:17,23:36:11.66:371,12,0	0/0:47,0:41:86.26:0,86,1049	0/0:11,0:9:15.02:0,15,169	0/0:55,0:48:83.76:0,84,1173	0/0:60,0:55:99:0,105,1372	0/0:76,0:68:99:0,118,2074	0/0:66,0:60:59.49:0,59,1731	0/0:44,0:39:78.92:0,79,1127	1/1:36,10:46:17.26:932,17,0	1/1:17,5:18:18.47:255,18,0	1/1:40,3:25:24.03:310,24,0	1/1:15,12:22:38.95:579,39,0	1/1:65,10:55:61.75:640,62,0	0/0:37,0:36:67.63:0,68,850	0/0:25,0:23:41.95:0,42,513	0/0:108,0:105:88.59:0,89,2430	1/1:18,10:24:48.06:806,48,0	1/1:35,6:32:22.39:531,22,0	1/1:32,10:33:46.34:756,46,0	1/1:7,5:7:11.92:125,12,0
chr10	109616626	.	G	GGTT	4856.90	PASS	AB=0.868;AC=12;AF=0.214;AN=56;BaseQRankSum=5.830;DP=2239;FS=49.422;HRun=0;HaplotypeScore=490.0889;InbreedingCoeff=-0.2663;MQ=40.93;MQ0=90;MQRankSum=-8.498;QD=4.64;ReadPosRankSum=0.109;VQSLOD=1.1670;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:104,2:80:99:0,100,1987	0/0:27,0:25:54.01:0,54,816	0/0:77,0:33:64.89:0,65,1108	0/0:77,0:35:88.91:0,89,1176	0/0:41,0:33:72.24:0,72,1142	0/0:48,0:40:72.14:0,72,1081	0/1:109,10:99:65.31:65,0,2886	0/0:124,5:101:99:0,175,2977	0/1:102,6:99:99:175,0,2817	0/0:106,3:90:99:0,223,3430	0/0:38,0:33:84.28:0,84,1302	0/1:56,37:77:99:433,0,1005	0/1:58,11:65:99:722,0,1210	0/1:79,12:83:99:755,0,1800	0/1:82,31:106:99:478,0,2174	0/1:97,5:96:5.45:5,0,3618	0/0:99,2:100:86.40:0,86,3775	0/1:58,6:60:99:270,0,1963	0/0:45,2:31:50.72:0,51,717	0/0:44,0:39:76.50:0,77,1192	0/0:182,0:165:99:0,258,4066	0/1:37,9:39:99:568,0,381	0/1:28,9:35:99:220,0,529	0/1:107,16:117:99:1092,0,2190	0/0:42,0:37:63.16:0,63,922	0/0:91,1:73:99:0,165,2462	0/1:73,6:70:72.65:73,0,2339	0/0:31,0:24:51.10:0,51,757
chr10	109616942	.	G	GGTT	8738.17	PASS	AB=0.837;AC=25;AF=0.481;AN=52;BaseQRankSum=1.451;DP=1030;FS=13.476;HRun=0;HaplotypeScore=376.5098;InbreedingCoeff=-0.6474;MQ=27.20;MQ0=123;MQRankSum=-5.739;QD=9.58;ReadPosRankSum=0.463;VQSLOD=3.2218;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,3:16:77.52:78,0,223	1/1:13,4:13:18.15:322,18,0	./.	./.	1/1:21,11:19:5.09:340,5,0	0/1:24,9:23:99:481,0,156	0/1:36,10:26:99:552,0,126	0/0:41,1:24:24.04:0,24,299	0/1:35,12:41:99:776,0,526	0/1:43,6:32:99:211,0,570	0/0:9,2:7:8.97:0,9,92	0/1:38,8:38:99:484,0,661	0/1:20,10:27:99:540,0,370	0/1:35,10:37:99:454,0,547	0/1:45,8:43:99:470,0,649	0/1:36,4:38:99:179,0,981	0/1:28,3:30:99:381,0,308	0/1:23,8:30:99:343,0,323	0/0:21,0:12:21.07:0,21,335	0/1:40,13:30:59.54:607,0,60	0/1:58,3:42:99:324,0,435	0/1:39,10:30:99:296,0,309	0/1:15,6:13:88.40:104,0,88	0/1:41,9:44:99:188,0,486	0/1:29,8:25:99:459,0,138	0/1:40,9:30:99:188,0,650	0/1:31,9:35:99:567,0,523	0/1:18,6:20:99:392,0,237
chr10	109616943	.	G	GTTA	6969.88	PASS	AB=0.928;AC=24;AF=0.462;AN=52;BaseQRankSum=4.083;DP=1003;FS=18.117;HRun=0;HaplotypeScore=365.5247;InbreedingCoeff=-0.7550;MQ=27.06;MQ0=119;MQRankSum=-6.379;QD=7.81;ReadPosRankSum=1.776;VQSLOD=2.8971;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,1:16:75.49:75,0,327	1/1:13,4:13:3:306,3,0	./.	./.	0/1:30,4:19:36.62:249,0,37	0/1:32,1:23:99:309,0,251	0/1:42,3:26:99:448,0,237	0/0:38,0:20:41.83:0,42,509	0/1:41,5:40:99:664,0,711	0/1:45,3:31:99:142,0,697	0/0:11,0:7:9.03:0,9,133	0/1:41,4:37:99:435,0,864	0/1:30,1:27:99:383,0,521	0/1:43,1:36:99:305,0,829	0/1:48,4:43:99:390,0,933	0/1:38,1:37:94.13:94,0,1170	0/1:24,5:29:99:379,0,541	0/1:28,2:29:99:295,0,526	0/0:19,2:12:5.08:0,5,339	0/1:43,10:30:99:530,0,99	0/1:48,10:40:99:370,0,697	0/1:47,0:28:99:164,0,447	0/1:17,3:12:55.70:56,0,130	0/1:45,3:42:99:146,0,733	0/1:32,4:24:99:430,0,217	0/1:43,4:28:99:113,0,722	0/1:38,2:35:99:423,0,649	0/1:24,0:20:99:263,0,268
chr10	109617915	.	TTCCCTC	T	4617.58	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.774;DP=642;FS=0.465;HRun=0;HaplotypeScore=145.8900;InbreedingCoeff=0.9731;MQ=64.71;MQ0=0;MQRankSum=-11.742;QD=32.07;ReadPosRankSum=-0.389;VQSLOD=4.6563;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:78.27:0,78,2463	0/0:4,0:4:12.04:0,12,405	0/0:25,0:20:27.91:0,28,730	0/0:28,0:23:36.23:0,36,1149	0/0:23,0:23:54.18:0,54,1645	0/0:16,0:16:24.08:0,24,674	0/0:30,0:30:75.24:0,75,2283	0/0:24,0:24:46.34:0,46,1099	0/0:24,0:24:23.93:0,24,718	0/0:26,0:26:58.06:0,58,1555	0/0:22,0:22:51.12:0,51,1510	1/1:10,21:30:57.20:1210,57,0	1/1:5,6:11:15.05:325,15,0	1/1:5,15:20:27.09:585,27,0	1/1:2,17:19:45.11:894,45,0	0/0:30,0:30:84.23:0,84,2580	0/0:25,0:25:63.20:0,63,1827	0/0:14,0:14:36.11:0,36,1066	0/0:18,0:18:39.11:0,39,1011	0/0:24,0:24:57.13:0,57,1669	0/0:54,0:50:96.06:0,96,2593	1/1:6,15:21:39.05:727,39,0	1/1:5,6:11:8.88:144,9,0	1/1:6,25:31:41.65:731,42,0	0/0:17,0:17:11.79:0,12,325	0/0:29,0:28:63.21:0,63,1948	0/0:16,0:16:39.06:0,39,694	0/0:9,0:9:24.08:0,24,796
chr10	109617946	.	AC	A	3900.88	PASS	AB=0.857;AC=32;AF=0.571;AN=56;BaseQRankSum=-2.580;DP=587;FS=19.202;HRun=9;HaplotypeScore=100.5114;InbreedingCoeff=0.7591;MQ=55.86;MQ0=12;MQRankSum=3.774;QD=11.51;ReadPosRankSum=6.916;VQSLOD=1.0914;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,29:34:58.97:542,59,0	0/1:5,1:6:12.41:12,0,116	0/0:36,1:19:17.23:0,17,388	0/0:39,0:14:26.85:0,27,258	1/1:10,10:20:30:274,30,0	1/1:12,0:12:5.88:36,6,0	1/1:11,17:26:50.95:456,51,0	1/1:9,6:14:11.99:110,12,0	1/1:20,1:21:8.85:73,9,0	0/0:17,0:17:2.15:0,2,244	0/0:13,0:13:30.08:0,30,338	0/0:24,0:24:45.02:0,45,322	0/1:5,1:6:15.49:15,0,62	0/0:17,0:17:27.75:0,28,212	0/0:20,0:20:30.29:0,30,239	0/0:27,1:28:36.09:0,36,583	1/1:9,16:24:55.74:482,56,0	1/1:4,14:18:33:302,33,0	1/1:4,7:10:15:137,15,0	1/1:12,10:22:26.47:235,26,0	1/1:18,33:44:64.06:584,64,0	0/0:16,0:16:8.93:0,9,66	0/0:7,0:7:6.49:0,6,66	0/0:29,1:30:32.92:0,33,313	1/1:19,1:20:11.83:81,12,0	1/1:13,16:23:36.77:332,37,0	1/1:3,4:6:5.96:48,6,0	1/1:6,7:13:20.68:182,21,0
chr10	109617954	.	CCGT	C	3610.21	PASS	AB=0.964;AC=23;AF=0.411;AN=56;BaseQRankSum=-5.559;DP=629;FS=5.488;HRun=0;HaplotypeScore=123.1248;InbreedingCoeff=0.0399;MQ=54.65;MQ0=19;MQRankSum=2.548;QD=9.45;ReadPosRankSum=8.247;VQSLOD=1.6426;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:37:27.59:427,0,28	0/1:7,0:7:9.40:9,0,156	0/0:34,0:16:17.23:0,17,389	0/0:33,0:10:27.02:0,27,260	1/1:21,0:22:41.56:401,42,0	0/1:3,10:14:10.75:73,0,11	1/1:20,0:20:40.22:507,40,0	0/1:12,0:10:16.07:95,0,16	1/1:4,17:22:9.87:97,10,0	0/1:17,0:15:55.47:55,0,235	0/0:14,0:14:33.04:0,33,357	0/0:31,0:31:61.37:0,61,511	0/1:9,0:9:9:9,0,121	0/0:26,0:26:20.07:0,20,398	0/0:21,0:21:36.78:0,37,328	0/0:27,0:27:51.14:0,51,817	0/1:31,1:32:99:420,0,132	0/1:24,0:24:99:162,0,142	1/1:11,0:9:15.47:137,15,0	0/1:17,0:19:60.94:199,0,61	0/1:50,0:49:99:434,0,170	0/0:17,0:17:20.96:0,21,191	0/0:12,0:12:11.04:0,11,95	0/0:32,0:31:11.13:0,11,483	1/1:4,0:23:18.04:183,18,0	0/1:30,0:24:99:260,0,267	0/1:7,0:7:33.19:33,0,78	0/1:14,0:13:74.89:108,0,75
chr10	109618001	.	T	TGC	2767.45	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=4.163;DP=577;FS=20.853;HRun=0;HaplotypeScore=92.3147;InbreedingCoeff=0.7424;MQ=67.01;MQ0=8;MQRankSum=-0.501;QD=11.93;ReadPosRankSum=4.585;VQSLOD=1.3005;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:80.63:0,81,671	0/0:9,0:9:20.93:0,21,168	0/0:28,0:22:56.13:0,56,605	0/0:30,0:24:51.60:0,52,665	0/0:14,0:14:38.96:0,39,328	0/0:14,0:14:29.95:0,30,248	0/0:19,0:16:44.99:0,45,405	0/0:20,0:18:40.41:0,40,400	0/0:24,0:24:49.99:0,50,383	0/0:15,0:14:38.85:0,39,335	0/0:9,0:9:14.81:0,15,109	1/1:22,3:25:49.41:511,49,0	1/1:10,0:10:20.76:172,21,0	1/1:26,1:27:50.21:546,50,0	1/1:18,1:19:50.76:450,51,0	0/0:19,0:19:26.06:0,26,413	0/0:33,0:33:74.11:0,74,734	0/0:23,0:23:58.68:0,59,570	0/0:11,0:11:32.83:0,33,272	0/0:12,0:12:21.42:0,21,223	0/1:46,0:43:29.24:29,0,406	1/1:17,0:16:41.77:394,42,0	1/1:14,0:13:30.67:284,31,0	1/1:31,4:34:50.76:537,51,0	0/0:14,0:14:26.97:0,27,238	0/1:27,0:25:28.88:29,0,316	0/0:14,0:14:20.32:0,20,251	0/1:12,0:12:17.78:18,0,97
chr10	109619090	.	A	AT	2243.76	PASS	AB=0.776;AC=14;AF=0.250;AN=56;BaseQRankSum=-4.365;DP=489;FS=3.577;HRun=10;HaplotypeScore=50.2755;InbreedingCoeff=0.6588;MQ=67.34;MQ0=0;MQRankSum=1.669;QD=17.13;ReadPosRankSum=2.247;VQSLOD=4.2057;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:80.88:0,81,665	0/0:7,0:7:20.98:0,21,172	0/1:16,1:16:2.63:3,0,251	0/1:7,0:6:18.46:26,0,18	0/0:13,0:14:35.95:0,36,296	0/0:12,0:12:29.96:0,30,246	0/0:15,0:16:43.97:0,44,348	0/0:29,0:29:65.87:0,66,539	0/0:16,0:16:44.95:0,45,369	0/0:32,0:32:89.90:0,90,739	0/0:11,0:11:20.97:0,21,172	1/1:3,11:14:8.44:295,8,0	1/1:2,11:13:8.44:295,8,0	0/1:4,15:19:1.17:400,0,1	1/1:2,15:17:47.71:490,48,0	0/0:25,0:25:65.91:0,66,542	0/0:38,0:38:95.88:0,96,788	0/0:18,0:20:58.01:0,58,455	0/0:19,1:20:24.94:0,25,411	0/0:10,0:10:17.97:0,18,148	0/0:15,1:16:6.16:0,6,243	0/1:3,6:9:9.31:113,0,9	1/1:5,17:22:45.11:480,45,0	1/1:2,11:13:30.08:320,30,0	0/0:11,0:11:26.47:0,26,206	0/0:24,0:24:53.91:0,54,443	0/0:18,1:19:18.94:0,19,359	0/0:6,0:6:14.98:0,15,123
chr10	109619444	.	ATGTG	A	3073.72	PASS	AC=38;AF=0.760;AN=50;BaseQRankSum=2.920;DP=152;FS=2.119;HRun=0;HaplotypeScore=41.3881;InbreedingCoeff=0.5302;MQ=62.47;MQ0=3;MQRankSum=-1.351;QD=26.96;ReadPosRankSum=0.076;VQSLOD=2.9723;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,1:12:14.97:199,15,0	0/0:3,0:3:9.03:0,9,238	0/0:6,0:3:3:0,3,26	0/0:13,0:3:3.01:0,3,38	1/1:3,0:3:9.03:142,9,0	1/1:0,1:2:6.02:79,6,0	1/1:3,1:4:6:51,6,0	1/1:5,24:29:68.67:944,69,0	1/1:1,1:2:3.01:48,3,0	0/0:7,0:7:21.05:0,21,424	0/0:5,0:5:12.04:0,12,303	1/1:2,0:2:3:25,3,0	./.	1/1:0,1:2:6.02:86,6,0	./.	0/0:3,0:3:9.03:0,9,208	1/1:11,2:12:0.36:176,0,0	1/1:9,2:10:24.55:335,25,0	1/1:1,4:5:12.01:156,12,0	1/1:2,0:2:3.01:49,3,0	1/1:1,0:1:3.01:48,3,0	./.	1/1:1,0:1:3.01:49,3,0	1/1:2,0:2:3.01:47,3,0	1/1:3,0:3:3.01:36,3,0	1/1:3,5:8:15.05:246,15,0	1/1:0,1:1:3.01:49,3,0	1/1:5,6:11:30.10:462,30,0
chr10	109619464	.	ATATATG	A	1980.17	PASS	AB=0.842;AC=33;AF=0.750;AN=44;BaseQRankSum=4.007;DP=123;FS=1.060;HRun=0;HaplotypeScore=50.4038;InbreedingCoeff=0.4847;MQ=42.35;MQ0=2;MQRankSum=-2.415;QD=20.63;ReadPosRankSum=-1.253;VQSLOD=2.7179;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:3.47:37,3,0	0/0:3,0:3:9.01:0,9,231	0/0:2,0:1:2.37:0,2,8	./.	1/1:1,0:1:0.47:1,0,0	1/1:2,0:2:6.02:91,6,0	1/1:2,0:2:6.01:62,6,0	1/1:26,1:26:67.80:564,68,0	1/1:1,0:1:3.01:47,3,0	0/0:5,0:5:15.05:0,15,424	0/0:6,0:6:15.04:0,15,318	./.	./.	1/1:2,0:2:6.02:106,6,0	1/1:3,0:3:8.99:75,9,0	0/0:3,0:3:9.03:0,9,277	0/1:13,3:15:40.20:230,0,40	1/1:10,1:10:19.18:209,19,0	1/1:5,0:5:6.44:67,6,0	1/1:1,0:1:3:25,3,0	./.	./.	1/1:1,0:1:3:25,3,0	./.	1/1:2,0:2:3.01:43,3,0	1/1:0,3:3:9.03:190,9,0	1/1:2,0:2:3.01:47,3,0	1/1:7,1:8:21.01:305,21,0
chr10	109619466	.	ATATG	A	1813.22	PASS	AB=0.941;AC=31;AF=0.705;AN=44;BaseQRankSum=4.130;DP=126;FS=2.144;HRun=0;HaplotypeScore=47.1556;InbreedingCoeff=0.4931;MQ=42.39;MQ0=2;MQRankSum=-3.377;QD=18.69;ReadPosRankSum=-0.735;VQSLOD=2.8595;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:8:2.96:19,3,0	0/0:3,0:3:9.01:0,9,183	0/0:2,0:1:2.37:0,2,8	./.	0/0:1,0:1:0:0,0,0	1/1:2,0:2:6.02:66,6,0	1/1:2,0:2:5.84:39,6,0	1/1:30,0:29:76.74:578,77,0	1/1:0,1:1:3.01:49,3,0	0/0:6,0:6:18.05:0,18,354	0/0:6,0:6:17.88:0,18,247	./.	./.	1/1:2,0:2:6.02:84,6,0	1/1:2,1:3:8.99:75,9,0	0/0:3,0:3:9.03:0,9,201	0/1:15,1:15:29.19:149,0,29	1/1:7,4:10:23.92:242,24,0	1/1:4,1:5:8.93:90,9,0	1/1:1,0:1:3:25,3,0	./.	./.	1/1:1,0:1:3:25,3,0	./.	1/1:2,0:2:3.01:44,3,0	1/1:3,0:3:9.03:134,9,0	1/1:0,2:2:3.01:50,3,0	1/1:4,4:8:21.01:286,21,0
chr10	109619468	.	ATG	A	1509.16	PASS	AB=1.000;AC=33;AF=0.750;AN=44;BaseQRankSum=3.955;DP=127;FS=0.000;HRun=0;HaplotypeScore=43.7001;InbreedingCoeff=0.4737;MQ=43.01;MQ0=2;MQRankSum=-2.047;QD=14.37;ReadPosRankSum=-0.494;VQSLOD=2.9281;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,2:9:2.97:20,3,0	0/0:3,0:3:9.01:0,9,129	0/0:2,0:1:2.37:0,2,8	./.	0/0:0,1:1:0:0,0,0	1/1:0,2:2:6.02:69,6,0	1/1:1,1:2:5.90:41,6,0	1/1:30,0:29:72.19:542,72,0	1/1:1,0:1:3.01:31,3,0	0/0:6,0:6:17.88:0,18,240	0/1:6,0:6:6.37:6,0,164	./.	./.	1/1:2,0:2:6.01:69,6,0	1/1:3,0:3:8.99:75,9,0	0/0:3,0:3:9.02:0,9,128	1/1:16,0:15:16.44:108,16,0	1/1:11,0:10:23.86:187,24,0	1/1:5,0:5:8.93:72,9,0	1/1:1,0:1:3:25,3,0	./.	./.	1/1:1,0:1:3:25,3,0	./.	1/1:0,2:2:3.01:44,3,0	1/1:3,0:3:9.02:92,9,0	1/1:2,0:2:3.01:32,3,0	1/1:8,1:9:20.99:204,21,0
chr10	109619518	.	T	TCA	1634.43	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=1.603;DP=301;FS=6.600;HRun=0;HaplotypeScore=70.8702;InbreedingCoeff=0.8537;MQ=64.79;MQ0=0;MQRankSum=-4.428;QD=29.72;ReadPosRankSum=1.871;VQSLOD=5.2629;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:21.05:0,21,245	0/0:4,0:4:9:0,9,96	0/0:15,0:14:24.05:0,24,289	0/1:11,0:9:10.11:10,0,191	0/0:9,0:9:27.07:0,27,322	0/0:7,0:7:18.04:0,18,211	0/0:8,0:8:21.07:0,21,260	0/0:39,0:39:99:0,99,1178	0/0:6,0:6:12.04:0,12,149	0/0:10,0:10:24.08:0,24,298	0/0:13,0:13:33.09:0,33,397	1/1:0,8:8:24.08:392,24,0	1/1:2,4:6:15.04:221,15,0	1/1:2,4:6:6.02:98,6,0	1/1:0,7:7:21.07:344,21,0	0/0:6,0:6:18.06:0,18,223	0/0:22,0:22:48.11:0,48,567	0/0:13,0:13:25.63:0,26,302	0/0:12,0:12:27.08:0,27,327	0/0:9,0:9:27.08:0,27,335	0/0:8,0:8:24.08:0,24,297	1/1:2,6:8:21.07:338,21,0	1/1:2,7:9:27.08:412,27,0	./.	0/0:11,0:11:21.07:0,21,260	0/0:10,0:10:21.06:0,21,249	0/0:10,0:10:18.06:0,18,221	0/0:12,0:12:21.07:0,21,256
chr10	109619566	.	G	GA	13217.97	PASS	AB=0.917;AC=45;AF=0.804;AN=56;BaseQRankSum=-5.819;DP=394;FS=5.300;HRun=0;HaplotypeScore=46.1649;InbreedingCoeff=0.8770;MQ=73.32;MQ0=0;MQRankSum=-3.530;QD=37.66;ReadPosRankSum=-0.139;VQSLOD=4.2669;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:57.13:861,57,0	0/0:4,0:4:12.04:0,12,165	0/0:11,0:11:26.99:0,27,294	0/0:9,0:7:16.77:0,17,154	1/1:1,17:18:50.15:617,50,0	1/1:0,14:14:36.12:569,36,0	1/1:0,8:8:21.07:332,21,0	1/1:0,48:47:99:1736,131,0	1/1:0,14:14:36.12:565,36,0	0/0:8,0:8:21.06:0,21,267	0/0:10,0:11:27.06:0,27,351	1/1:2,7:9:27.06:373,27,0	1/1:1,14:15:45.13:666,45,0	1/1:1,11:12:36.11:537,36,0	1/1:1,7:9:27.07:367,27,0	0/1:10,1:11:14.44:14,0,381	1/1:0,15:15:41.97:599,42,0	1/1:0,11:12:24.08:372,24,0	1/1:1,15:16:45.14:680,45,0	1/1:0,14:15:45.03:640,45,0	1/1:2,15:17:44.50:710,45,0	1/1:1,12:13:39.05:530,39,0	1/1:5,9:14:42.03:561,42,0	1/1:0,6:7:21.06:297,21,0	1/1:0,15:15:36.12:571,36,0	1/1:0,14:15:45.11:626,45,0	1/1:1,12:13:24.08:379,24,0	1/1:0,14:14:39.13:615,39,0
chr10	109620220	.	A	ATGTG	4257.75	PASS	AB=0.838;AC=43;AF=0.768;AN=56;BaseQRankSum=0.300;DP=512;FS=0.000;HRun=0;HaplotypeScore=88.8283;InbreedingCoeff=0.4670;MQ=58.20;MQ0=8;MQRankSum=-1.600;QD=10.11;ReadPosRankSum=-1.813;VQSLOD=3.2617;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,1:32:6.02:90,6,0	0/0:10,0:10:18.06:0,18,284	1/1:22,0:11:0.47:1,0,0	0/0:35,0:16:3.01:0,3,40	0/1:18,3:22:11.71:433,0,12	1/1:9,8:18:9.03:214,9,0	1/1:11,9:22:20.81:440,21,0	1/1:21,0:20:8.24:86,8,0	0/1:4,3:8:38.59:75,0,39	0/0:18,0:19:27.07:0,27,382	0/0:12,0:12:18.06:0,18,274	1/1:3,9:13:24.08:571,24,0	1/1:7,1:9:8.77:154,9,0	1/1:11,10:24:17.80:369,18,0	1/1:8,2:10:18.06:310,18,0	0/0:14,0:14:21.07:0,21,331	1/1:22,0:34:3.48:45,3,0	1/1:12,1:13:10.73:131,11,0	1/1:17,0:20:15.48:165,15,0	1/1:13,0:12:4.88:52,5,0	1/1:32,0:30:4.25:29,4,0	1/1:6,4:10:6.02:136,6,0	1/1:6,1:9:5.54:83,6,0	1/1:11,8:21:12.71:229,13,0	1/1:4,9:16:9.03:214,9,0	0/1:27,0:26:17.55:274,0,18	1/1:12,0:12:8.85:62,9,0	1/1:11,0:10:6.02:94,6,0
chr10	109621387	.	CT	C	4476.93	PASS	AB=0.647;AC=29;AF=0.518;AN=56;BaseQRankSum=4.280;DP=554;FS=0.785;HRun=10;HaplotypeScore=91.6546;InbreedingCoeff=0.8974;MQ=77.00;MQ0=5;MQRankSum=-5.586;QD=17.02;ReadPosRankSum=1.306;VQSLOD=5.1123;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,8:13:32.95:277,33,0	0/0:6,0:6:18.03:0,18,190	0/0:63,0:26:43.83:0,44,349	0/0:59,0:29:5.10:0,5,230	1/1:18,0:18:44.14:254,44,0	1/1:14,0:14:37.08:242,37,0	1/1:8,0:8:20.43:119,20,0	1/1:11,17:28:62.96:542,63,0	1/1:13,0:13:24.83:121,25,0	0/0:27,0:30:71.84:0,72,743	0/0:22,0:22:63.14:0,63,678	0/0:16,0:16:27.07:0,27,294	0/0:13,0:13:30.08:0,30,332	0/0:20,0:20:42.10:0,42,455	0/0:9,0:9:27.07:0,27,298	0/0:16,0:16:42.10:0,42,456	1/1:15,18:32:65.97:571,66,0	1/1:12,5:16:23.97:208,24,0	1/1:10,12:22:47.98:416,48,0	1/1:5,10:15:38.97:334,39,0	1/1:6,4:10:11.99:104,12,0	0/0:18,0:18:48.13:0,48,531	0/0:17,0:17:32.86:0,33,422	0/0:2,0:2:6.02:0,6,66	1/1:13,0:14:24.08:195,24,0	0/1:10,12:22:8.60:314,0,9	1/1:11,18:29:62.33:636,62,0	1/1:6,1:7:17.83:143,18,0
chr10	109621412	.	GT	G	5490.90	PASS	AB=0.548;AC=33;AF=0.589;AN=56;BaseQRankSum=-1.150;DP=532;FS=9.845;HRun=10;HaplotypeScore=90.9630;InbreedingCoeff=0.8406;MQ=74.76;MQ0=5;MQRankSum=-1.432;QD=19.68;ReadPosRankSum=-0.606;VQSLOD=4.7218;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,12:16:38.99:338,39,0	0/0:7,0:8:23.90:0,24,247	0/0:48,0:19:3.10:0,3,118	0/0:48,2:25:5:0,5,177	0/0:5,0:26:67.41:0,67,354	0/0:1,0:14:33.84:0,34,167	0/0:3,0:7:11.36:0,11,57	1/1:13,17:30:54.32:450,54,0	0/0:2,0:11:25.57:0,26,128	0/0:30,1:31:49.12:0,49,753	0/0:26,0:26:69.18:0,69,754	1/1:2,9:11:15.68:220,16,0	1/1:2,17:19:26.68:392,27,0	1/1:2,17:19:41.99:365,42,0	1/1:0,14:14:35.99:313,36,0	0/0:12,0:12:30.08:0,30,332	1/1:4,25:28:68.95:594,69,0	1/1:2,12:13:35.98:312,36,0	1/1:9,12:21:44.87:380,45,0	1/1:2,12:14:35.98:312,36,0	1/1:3,4:7:11.98:100,12,0	1/1:2,18:20:53.98:469,54,0	1/1:5,14:19:8.80:305,9,0	1/1:1,2:3:5.99:52,6,0	0/0:3,0:16:39.55:0,40,199	0/1:3,14:17:21.37:293,0,21	1/1:3,20:23:59.97:517,60,0	1/1:0,3:3:9:78,9,0
chr10	109621703	.	G	GGATA	8251.87	PASS	AB=0.826;AC=27;AF=0.500;AN=54;BaseQRankSum=-8.694;DP=685;FS=4.777;HRun=0;HaplotypeScore=120.3699;InbreedingCoeff=0.7188;MQ=66.39;MQ0=6;MQRankSum=-0.659;QD=20.37;ReadPosRankSum=-1.706;VQSLOD=3.6717;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,7:41:28.91:784,29,0	0/0:9,0:9:21.07:0,21,325	./.	0/0:20,0:17:5.98:0,6,57	1/1:23,8:30:17.93:422,18,0	1/1:10,10:20:12.04:282,12,0	1/1:8,2:10:6.02:141,6,0	0/1:35,0:34:28.38:215,0,28	1/1:16,12:27:33.11:771,33,0	0/0:30,0:30:33.11:0,33,505	0/0:19,0:19:30.09:0,30,443	0/0:24,0:24:48.16:0,48,730	0/0:20,0:20:33.11:0,33,508	0/0:25,0:25:57.16:0,57,821	0/0:31,0:31:57.19:0,57,876	0/0:27,0:27:57.18:0,57,860	0/1:16,6:22:21.55:425,0,22	1/1:14,13:28:38.96:803,39,0	1/1:17,3:19:9.03:212,9,0	1/1:20,8:29:12.04:281,12,0	1/1:14,12:27:30.10:691,30,0	0/0:14,0:14:15.05:0,15,227	0/0:22,0:22:24.08:0,24,365	0/0:19,0:19:42.13:0,42,628	0/1:15,11:26:25.43:397,0,25	1/1:16,15:31:45.15:1042,45,0	1/1:12,28:41:25.76:1574,26,0	1/1:8,4:12:9.03:211,9,0
chr10	109621985	.	GATAA	G	390.12	PASS	AB=0.952;AC=10;AF=0.179;AN=56;BaseQRankSum=6.519;DP=784;FS=9.625;HRun=0;HaplotypeScore=189.9255;InbreedingCoeff=-0.2323;MQ=54.39;MQ0=10;MQRankSum=-2.880;QD=1.34;ReadPosRankSum=-5.919;VQSLOD=-0.2095;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:26:45.61:0,46,858	0/0:14,0:14:42.14:0,42,1034	0/0:23,0:10:3.94:0,4,507	0/0:26,0:12:18.33:0,18,530	0/0:36,0:36:7.91:0,8,1422	0/1:29,0:28:33.92:34,0,1115	0/0:16,0:15:11.36:0,11,198	0/1:35,4:39:61.79:62,0,1942	0/1:32,0:31:16.55:17,0,917	0/0:44,0:44:99:0,129,3255	0/0:13,0:13:38.16:0,38,871	0/1:26,0:26:99:103,0,239	0/1:31,0:31:48.14:48,0,359	0/1:25,0:25:31.40:31,0,292	0/1:38,0:38:64.66:65,0,380	0/0:31,0:31:90.31:0,90,2313	0/0:11,0:11:14.87:0,15,328	0/1:22,0:22:39.78:40,0,670	0/0:19,0:19:48.08:0,48,1029	0/0:41,0:41:67.06:0,67,1155	0/0:14,0:14:22.59:0,23,664	0/1:17,8:25:9.30:9,0,876	0/0:21,0:21:22.90:0,23,352	0/1:20,4:24:99:124,0,592	0/0:33,0:33:41.62:0,42,1423	0/0:50,0:50:99:0,130,2554	0/0:47,0:47:41.86:0,42,763	0/0:28,0:28:8.21:0,8,451
chr10	109621989	.	A	AATAGGTAG	8855.37	PASS	AB=0.820;AC=39;AF=0.696;AN=56;BaseQRankSum=0.974;DP=810;FS=4.488;HRun=0;HaplotypeScore=208.1635;InbreedingCoeff=0.5807;MQ=53.60;MQ0=11;MQRankSum=-1.511;QD=13.99;ReadPosRankSum=-1.069;VQSLOD=3.5307;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:21.49:327,21,0	0/0:15,0:15:38.94:0,39,532	0/0:21,0:8:12.01:0,12,117	0/1:23,0:10:5.55:6,0,90	1/1:38,0:38:48.77:509,49,0	1/1:31,0:30:40.83:469,41,0	0/1:14,0:13:14.26:16,0,14	1/1:44,0:43:99:887,99,0	1/1:31,0:30:48.02:588,48,0	0/0:47,0:47:99:0,129,2065	0/0:14,0:14:27.02:0,27,492	1/1:3,22:26:12.04:273,12,0	1/1:6,24:32:6:209,6,0	1/1:7,22:32:3.01:70,3,0	1/1:6,34:43:9.03:269,9,0	0/0:32,0:32:75.14:0,75,1418	1/1:10,0:10:17.99:135,18,0	0/1:19,0:19:46.16:295,0,46	1/1:22,0:22:47.71:858,48,0	1/1:44,0:44:18.82:103,19,0	1/1:13,0:13:26.07:360,26,0	1/1:23,0:23:32.80:346,33,0	0/1:4,17:24:0:0,0,0	1/1:24,0:24:3.01:268,3,0	1/1:30,0:30:53.25:564,53,0	1/1:51,0:51:99:1846,119,0	0/0:48,0:48:5.27:0,5,20	0/1:6,24:30:2.34:458,0,2
chr10	109621994	.	G	GTAGATAGGTAGA	11732.20	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-0.947;DP=842;FS=0.000;HRun=0;HaplotypeScore=251.4950;InbreedingCoeff=0.3209;MQ=53.26;MQ0=13;MQRankSum=-3.141;QD=17.03;ReadPosRankSum=-0.225;VQSLOD=3.5281;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:47.89:750,48,0	0/0:15,0:15:41.94:0,42,705	0/0:22,0:8:12.01:0,12,117	0/0:23,0:8:1.36:0,1,94	1/1:39,0:39:57.74:559,58,0	1/1:32,0:31:62.50:635,62,0	1/1:14,0:13:8.22:76,8,0	1/1:46,0:44:99:1129,120,0	1/1:31,0:30:46.83:664,47,0	0/0:47,0:47:99:0,135,2772	0/0:12,0:13:26.86:0,27,633	0/1:26,0:26:11.05:104,0,11	0/1:33,0:33:36.67:125,0,37	0/1:32,0:32:11.48:11,0,132	0/1:44,0:44:87.10:129,0,87	0/0:33,0:33:81.15:0,81,1884	0/1:11,0:11:0.72:125,0,1	0/1:20,0:20:53.77:601,0,54	1/1:5,15:23:46.51:1426,47,0	1/1:9,33:48:4.32:356,4,0	1/1:15,0:15:29.65:478,30,0	1/1:25,0:24:16.14:288,16,0	0/1:24,0:24:0:0,0,0	0/1:23,0:23:39.42:131,0,39	1/1:35,0:35:65.96:726,66,0	1/1:3,45:56:99:2969,147,0	1/1:7,31:50:6.02:149,6,0	0/1:32,0:32:99:301,0,143
chr10	109622298	.	G	GTAGA	5737.05	PASS	AB=0.986;AC=12;AF=0.214;AN=56;BaseQRankSum=-4.945;DP=843;FS=1.916;HRun=0;HaplotypeScore=226.3488;InbreedingCoeff=0.7865;MQ=56.95;MQ0=5;MQRankSum=-4.495;QD=29.73;ReadPosRankSum=1.775;VQSLOD=4.7031;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:60.20:0,60,1002	0/0:12,0:12:30.08:0,30,468	0/0:46,0:32:45.91:0,46,945	0/1:34,0:27:60.07:60,0,620	1/1:4,14:19:17.81:413,18,0	1/1:17,23:39:70.47:1615,70,0	1/1:13,18:31:69.10:1574,69,0	0/0:42,0:41:88.14:0,88,1410	1/1:11,18:29:66.22:1529,66,0	0/0:45,0:45:99:0,117,2044	0/0:18,0:18:46.39:0,46,774	0/0:29,0:29:63.17:0,63,1033	0/0:24,0:24:57.15:0,57,975	0/0:28,0:28:75.25:0,75,1290	0/0:40,0:40:99:0,114,1842	0/0:37,0:37:99:0,99,1707	0/0:22,0:22:47.22:0,47,893	0/0:21,0:21:57.19:0,57,1004	0/0:19,0:19:48.09:0,48,705	0/0:20,0:20:35.98:0,36,624	0/0:64,0:63:99:0,125,2001	0/0:31,0:29:47.99:0,48,755	0/1:18,0:18:19.96:20,0,400	0/0:29,0:29:72.07:0,72,1124	1/1:7,14:21:26.99:526,27,0	0/0:42,0:42:93.79:0,94,1653	0/0:29,0:29:60.17:0,60,986	0/0:26,0:26:72.24:0,72,1228
chr10	109622347	.	T	TG	15898.20	PASS	AB=0.833;AC=54;AF=0.964;AN=56;BaseQRankSum=-0.129;DP=607;FS=21.774;HRun=2;HaplotypeScore=220.4899;InbreedingCoeff=-0.0462;MQ=46.71;MQ0=1;MQRankSum=-0.604;QD=26.19;ReadPosRankSum=4.170;VQSLOD=1.7607;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,17:22:42.11:511,42,0	1/1:3,6:9:21.01:234,21,0	0/1:11,3:8:54.08:66,0,54	0/1:13,3:11:48.27:84,0,48	1/1:2,11:13:2.98:43,3,0	1/1:2,22:24:54.11:619,54,0	1/1:5,18:23:32.67:329,33,0	1/1:12,15:24:51.08:628,51,0	1/1:5,22:27:72.04:830,72,0	1/1:6,29:34:99:1347,102,0	1/1:3,13:16:27.03:357,27,0	1/1:6,18:24:53.82:625,54,0	1/1:3,16:19:54.14:632,54,0	1/1:5,14:19:48.02:540,48,0	1/1:8,27:35:99:1279,99,0	1/1:3,24:27:78.25:1033,78,0	1/1:3,23:26:72.20:897,72,0	1/1:3,13:16:45.15:623,45,0	1/1:3,2:5:9.03:125,9,0	1/1:5,15:20:21:252,21,0	1/1:10,30:39:45.06:565,45,0	1/1:4,18:21:33.09:431,33,0	1/1:3,11:14:23.86:274,24,0	1/1:8,20:28:66.18:830,66,0	1/1:2,12:14:24.07:292,24,0	1/1:1,27:28:82.13:1033,82,0	1/1:3,20:23:50.85:630,51,0	1/1:1,19:20:57.19:787,57,0
chr10	109622352	.	GA	G	13927.41	PASS	AB=0.791;AC=54;AF=0.964;AN=56;BaseQRankSum=1.075;DP=551;FS=14.560;HRun=2;HaplotypeScore=211.7570;InbreedingCoeff=-0.0450;MQ=46.16;MQ0=1;MQRankSum=-0.853;QD=25.28;ReadPosRankSum=3.465;VQSLOD=2.3082;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:48.11:556,48,0	1/1:1,7:8:23.92:250,24,0	0/1:9,5:10:41.49:81,0,41	0/1:9,2:7:30.03:67,0,30	1/1:0,12:12:3.01:40,3,0	1/1:0,23:23:54.09:566,54,0	1/1:3,17:20:26.33:263,26,0	1/1:5,16:19:42.10:498,42,0	1/1:2,23:25:69.17:797,69,0	1/1:3,28:30:90.23:1056,90,0	1/1:0,13:13:24.05:282,24,0	1/1:3,20:23:48.06:531,48,0	1/1:0,17:17:51.08:543,51,0	1/1:5,12:17:44.93:490,45,0	1/1:6,28:34:99:1170,99,0	1/1:2,23:25:75.20:883,75,0	1/1:3,22:25:63.13:697,63,0	1/1:3,13:16:45.12:548,45,0	1/1:1,3:4:12.04:149,12,0	1/1:2,15:17:21.50:227,21,0	1/1:4,30:33:36.46:424,36,0	1/1:2,19:20:33.05:402,33,0	1/1:3,10:13:23.52:240,24,0	1/1:4,22:26:57.12:651,57,0	1/1:1,11:12:27.06:297,27,0	1/1:0,28:27:79.10:893,79,0	1/1:1,20:21:50.51:581,51,0	1/1:0,20:20:60.18:745,60,0
chr10	109622374	.	GT	G	6650.63	PASS	AB=0.925;AC=54;AF=0.964;AN=56;BaseQRankSum=3.365;DP=609;FS=4.184;HRun=1;HaplotypeScore=261.4689;InbreedingCoeff=-0.0607;MQ=60.52;MQ0=0;MQRankSum=0.106;QD=10.92;ReadPosRankSum=7.163;VQSLOD=3.2768;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,1:21:57.46:340,57,0	1/1:10,1:11:28.97:186,29,0	1/1:17,3:19:1.32:82,1,0	0/1:14,3:15:47.45:53,0,47	1/1:18,0:18:8.52:51,9,0	0/1:24,0:24:1.01:205,0,1	1/1:21,0:21:46.89:290,47,0	1/1:37,0:37:64.37:340,64,0	1/1:26,0:26:44.73:365,45,0	1/1:24,1:24:57.37:310,57,0	1/1:15,0:15:24.71:115,25,0	1/1:24,0:24:48.25:352,48,0	1/1:17,3:20:0.02:259,0,0	1/1:15,0:15:9.68:183,10,0	1/1:30,1:31:79.09:431,79,0	1/1:29,0:29:81.78:420,82,0	1/1:23,1:24:28.41:320,28,0	1/1:12,0:12:8.06:122,8,0	1/1:9,0:9:4.50:90,5,0	1/1:22,0:22:26.56:171,27,0	1/1:29,1:29:31.35:151,31,0	1/1:21,3:23:28.93:184,29,0	1/1:13,0:13:13.09:84,13,0	1/1:25,0:25:45.32:243,45,0	1/1:11,1:12:16.93:186,17,0	1/1:29,1:29:15.53:306,16,0	1/1:24,1:25:71.35:399,71,0	1/1:29,0:29:81.84:416,82,0
chr10	109622379	.	GT	G	6018.45	PASS	AB=0.985;AC=47;AF=0.839;AN=56;BaseQRankSum=3.294;DP=624;FS=25.664;HRun=1;HaplotypeScore=269.4865;InbreedingCoeff=-0.1675;MQ=62.37;MQ0=0;MQRankSum=-1.977;QD=9.64;ReadPosRankSum=11.632;VQSLOD=0.2491;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:43.31:318,43,0	1/1:12,0:12:9.90:145,10,0	0/1:21,0:20:50.37:67,0,50	0/1:18,0:16:61.69:63,0,62	1/1:22,0:22:8.39:41,8,0	1/1:22,0:22:25.20:240,25,0	1/1:21,0:21:31.71:257,32,0	0/1:42,0:42:86.60:276,0,87	1/1:27,0:27:12.54:309,13,0	1/1:24,1:24:24.48:266,24,0	1/1:16,0:16:11.73:99,12,0	1/1:26,1:27:26.15:347,26,0	1/1:17,0:17:46.76:255,47,0	1/1:14,0:14:19.63:188,20,0	0/1:35,0:35:2.49:315,0,2	1/1:32,0:32:31.77:366,32,0	1/1:22,0:22:60.57:344,61,0	1/1:12,0:12:26.67:135,27,0	0/1:9,1:10:19.03:102,0,19	0/1:21,1:22:3.55:119,0,4	0/1:29,0:29:3.58:115,0,4	0/1:22,0:22:42.98:106,0,43	0/1:9,0:9:0.08:52,0,0	1/1:25,0:25:10.45:195,10,0	1/1:14,0:14:31.80:182,32,0	1/1:27,0:26:50.04:340,50,0	1/1:29,0:29:11.01:332,11,0	1/1:28,1:29:82.36:442,82,0
chr10	109622968	.	C	CT	1822.32	PASS	AB=0.597;AC=11;AF=0.196;AN=56;BaseQRankSum=-5.990;DP=590;FS=0.000;HRun=12;HaplotypeScore=63.7830;InbreedingCoeff=0.7050;MQ=76.35;MQ0=0;MQRankSum=-0.674;QD=14.82;ReadPosRankSum=1.468;VQSLOD=4.4095;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,3:33:21.25:0,21,469	0/0:11,0:11:29.83:0,30,219	0/0:27,1:21:7.41:0,7,86	0/0:23,0:15:5.47:0,5,59	0/0:27,0:27:68.48:0,68,494	0/0:21,0:22:55.68:0,56,399	0/0:16,0:17:43.77:0,44,312	0/0:31,0:31:51.98:0,52,364	0/0:15,0:15:32.79:0,33,241	0/0:32,0:32:74.45:0,74,541	0/0:14,0:14:32.80:0,33,241	0/1:7,11:19:32.58:199,0,33	0/1:7,12:19:2.32:334,0,2	0/1:4,15:20:1.24:308,0,1	1/1:5,12:17:33.05:321,33,0	0/0:19,0:19:41.74:0,42,306	0/0:19,0:20:52.72:0,53,375	0/0:17,0:18:49.29:0,49,352	0/0:21,0:25:49.64:0,50,315	0/0:21,1:22:30.53:0,31,385	0/0:22,0:22:30.46:0,30,384	1/1:4,8:12:24.04:234,24,0	1/1:2,14:17:7.17:264,7,0	1/1:3,15:18:18.76:330,19,0	0/0:28,1:29:42.39:0,42,473	0/0:24,0:27:62.50:0,62,430	0/0:21,2:23:24.21:0,24,329	0/0:9,0:9:17.82:0,18,126
chr10	109623432	.	A	AACATACAT	20561.08	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-4.643;DP=812;FS=0.489;HRun=0;HaplotypeScore=184.8687;InbreedingCoeff=0.8706;MQ=52.82;MQ0=2;MQRankSum=-10.811;QD=31.11;ReadPosRankSum=-4.635;VQSLOD=3.3691;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,19:48:36.12:1445,36,0	0/0:9,0:9:18.06:0,18,350	0/0:23,0:18:3.01:0,3,32	0/0:19,0:19:3.01:0,3,33	1/1:12,11:24:24.08:911,24,0	1/1:12,19:34:36.12:1407,36,0	1/1:21,11:37:15.05:511,15,0	1/1:48,0:47:36.02:540,36,0	1/1:14,9:26:33.11:1302,33,0	0/0:42,0:42:93.28:0,93,2127	0/0:18,0:18:36.07:0,36,689	1/1:9,19:30:33.11:1347,33,0	1/1:14,15:30:33.11:1272,33,0	1/1:12,19:34:45.14:1710,45,0	1/1:19,14:38:33.11:1318,33,0	0/0:40,0:40:93.28:0,93,2073	1/1:15,7:28:6.02:241,6,0	1/1:17,7:26:9.92:322,10,0	1/1:17,0:15:12.93:350,13,0	1/1:17,7:24:39.10:1316,39,0	1/1:35,0:35:24.06:543,24,0	1/1:11,8:22:18.06:720,18,0	1/1:8,15:26:27.01:1062,27,0	1/1:37,0:37:24.53:572,25,0	1/1:9,9:19:21.07:779,21,0	1/1:11,19:29:54.05:1587,54,0	1/1:14,18:33:24.08:939,24,0	1/1:8,5:13:9.03:366,9,0
chr10	109623878	.	C	CTT	1144.44	PASS	AB=0.790;AC=37;AF=0.712;AN=52;BaseQRankSum=0.435;DP=302;FS=5.667;HRun=14;HaplotypeScore=26.0665;InbreedingCoeff=0.4782;MQ=27.00;MQ0=40;MQRankSum=-4.663;QD=8.74;ReadPosRankSum=-3.009;VQSLOD=-0.3852;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,3:7:8.51:76,9,0	./.	0/0:71,0:4:5.91:0,6,42	0/0:63,0:6:4.75:0,5,46	1/1:4,2:5:3.01:39,3,0	1/1:3,4:7:2.04:6,2,0	1/1:2,6:7:9.03:117,9,0	1/1:6,3:6:12.03:152,12,0	1/1:3,1:6:8.38:73,8,0	0/0:11,0:10:11.88:0,12,99	0/0:7,0:7:8.96:0,9,75	1/1:3,0:3:5.99:54,6,0	1/1:6,0:6:3.01:30,3,0	1/1:6,0:6:6.01:61,6,0	1/1:3,0:4:2.98:21,3,0	0/0:5,0:6:7.78:0,8,42	1/1:4,3:5:2.37:8,2,0	0/1:3,1:3:0:0,0,0	0/1:7,2:8:7:157,0,7	1/1:0,1:2:3.01:38,3,0	1/1:1,2:6:5.50:45,6,0	0/0:5,0:5:3:0,3,25	./.	1/1:14,0:12:12.02:121,12,0	0/1:3,1:4:0:0,0,0	1/1:2,2:3:9.03:115,9,0	1/1:5,2:6:8.34:61,8,0	1/1:2,3:4:9.03:118,9,0
chr10	109623892	.	T	TTC	673.84	PASS	AB=0.950;AC=28;AF=0.538;AN=52;BaseQRankSum=1.363;DP=197;FS=3.136;HRun=0;HaplotypeScore=26.9784;InbreedingCoeff=0.1939;MQ=31.04;MQ0=18;MQRankSum=-1.228;QD=6.48;ReadPosRankSum=1.476;VQSLOD=1.8915;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:9:18.01:18,0,31	./.	0/0:21,0:2:5.93:0,6,48	0/0:30,0:3:5.96:0,6,58	1/1:3,0:2:2.98:22,3,0	0/0:10,0:9:4.45:0,4,26	1/1:6,0:5:8.93:63,9,0	0/1:10,0:6:37.04:37,0,45	0/1:4,0:4:1.18:20,0,1	0/0:6,0:5:14.63:0,15,160	0/0:4,0:4:9.03:0,9,113	1/1:0,2:3:6.02:89,6,0	1/1:0,5:7:3.01:50,3,0	1/1:1,5:7:6.02:99,6,0	1/1:1,3:5:3.01:41,3,0	0/0:3,0:3:6:0,6,60	0/0:9,0:5:5.44:0,5,27	0/0:2,0:2:2.96:0,3,19	0/1:10,0:10:36.93:37,0,58	1/1:2,0:2:2.97:20,3,0	0/1:5,0:5:3.07:12,0,3	0/1:2,3:6:2.33:11,0,2	1/1:1,1:2:2.92:17,3,0	1/1:1,9:10:12.04:189,12,0	./.	0/1:5,0:4:8.13:38,0,8	0/1:5,0:4:6.88:7,0,20	1/1:3,0:3:8.89:60,9,0
chr10	109624044	.	G	GA	481.25	PASS	AB=0.821;AC=23;AF=0.500;AN=46;BaseQRankSum=0.494;DP=152;FS=0.000;HRun=15;HaplotypeScore=36.8757;InbreedingCoeff=0.1937;MQ=58.47;MQ0=9;MQRankSum=-1.027;QD=4.63;ReadPosRankSum=-1.818;VQSLOD=0.0941;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:5,2:3:0:0,0,0	0/0:3,0:5:9.93:0,10,47	0/1:14,0:5:0.73:8,0,1	0/0:21,0:8:5.19:0,5,23	./.	0/1:2,2:3:0:0,0,0	0/1:4,3:3:0:0,0,0	0/1:6,2:8:3.43:71,0,3	0/1:4,0:4:0:1,0,0	0/1:5,1:6:25.08:25,0,54	0/0:6,0:6:5.79:0,6,35	0/1:2,0:3:10.86:11,0,16	1/1:1,3:4:8.99:75,9,0	0/1:5,2:7:2.67:67,0,3	1/1:1,6:7:17.91:143,18,0	0/0:8,0:9:19.62:0,20,113	0/1:2,0:2:0:0,0,0	./.	1/1:7,2:5:11.82:83,12,0	0/1:1,1:2:0:0,0,0	./.	1/1:2,1:3:3:25,3,0	0/0:4,0:3:2.81:0,3,18	0/1:3,4:7:11.99:19,0,12	./.	0/1:5,1:6:6.11:51,0,6	./.	1/1:1,1:1:3:25,3,0
chr10	109624053	.	A	ACC	36.29	PASS	AB=0.920;AC=8;AF=0.148;AN=54;BaseQRankSum=5.546;DP=227;FS=0.000;HRun=0;HaplotypeScore=51.6931;InbreedingCoeff=0.0113;MQ=56.77;MQ0=11;MQRankSum=-2.623;QD=0.74;ReadPosRankSum=-2.457;VQSLOD=0.7294;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:6:7.57:0,8,79	0/0:5,0:5:15.04:0,15,195	0/0:20,0:6:1.51:0,2,80	0/0:30,0:14:2.25:0,2,64	0/0:3,0:2:1.02:0,1,35	1/1:3,0:2:3:25,3,0	0/1:8,0:4:21.55:22,0,33	0/1:14,1:15:48.27:48,0,253	0/1:4,2:6:35.13:35,0,138	0/0:12,0:12:33.11:0,33,503	0/0:9,0:9:24.06:0,24,311	0/0:7,0:6:18.02:0,18,233	0/0:5,0:5:9.03:0,9,115	0/0:10,0:10:20.93:0,21,323	0/0:6,0:6:18.05:0,18,220	0/0:10,0:10:30.10:0,30,453	0/1:3,0:2:0:0,0,0	./.	0/0:11,0:6:16.23:0,16,166	0/0:6,0:5:6.87:0,7,130	0/0:2,0:2:2.99:0,3,23	0/0:3,0:3:9.03:0,9,123	0/0:4,0:3:9.03:0,9,133	0/0:9,0:9:12.04:0,12,163	0/1:9,0:8:6.65:7,0,167	0/0:8,0:8:21.54:0,22,275	0/1:4,1:4:16.92:17,0,56	0/0:3,0:2:3.01:0,3,34
chr10	109624059	.	AGAACC	A	870.33	PASS	AB=0.862;AC=14;AF=0.269;AN=52;BaseQRankSum=1.271;DP=244;FS=1.305;HRun=0;HaplotypeScore=44.0212;InbreedingCoeff=-0.0989;MQ=56.62;MQ0=9;MQRankSum=-4.443;QD=9.46;ReadPosRankSum=-1.992;VQSLOD=1.6898;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:6:84.41:87,0,84	0/0:5,0:5:15.05:0,15,286	0/0:22,0:7:12.13:0,12,129	0/0:29,0:14:24.86:0,25,316	0/1:3,2:4:49.41:49,0,85	1/1:2,1:2:3.01:58,3,0	0/1:7,0:4:40.56:41,0,59	0/1:12,3:15:99:170,0,330	0/1:6,0:6:41.36:41,0,201	0/0:13,0:13:39.11:0,39,867	0/0:9,0:10:26.97:0,27,579	0/0:7,0:6:18.06:0,18,407	0/0:6,0:6:18.06:0,18,383	0/0:11,0:11:33.11:0,33,630	0/0:8,0:8:24.08:0,24,551	0/0:10,0:10:30.10:0,30,760	./.	./.	0/1:11,0:6:84.99:85,0,123	0/1:5,1:5:20.76:21,0,180	1/1:2,1:3:3.89:37,4,0	0/0:3,0:3:9.03:0,9,182	0/0:5,0:5:15.05:0,15,353	0/0:10,0:10:17.04:0,17,377	0/1:6,4:9:99:171,0,172	0/1:6,3:9:99:188,0,269	0/1:4,2:5:57.14:73,0,57	0/0:2,1:2:3.01:0,3,66
chr10	109625826	.	A	ATCTCTGTCTC	27745.33	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-8.151;DP=1004;FS=1.320;HRun=0;HaplotypeScore=248.0488;InbreedingCoeff=0.9402;MQ=67.63;MQ0=13;MQRankSum=-11.933;QD=39.41;ReadPosRankSum=2.830;VQSLOD=4.5803;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,20:43:30.10:1350,30,0	0/0:14,0:14:33.10:0,33,763	0/0:73,0:48:35.88:0,36,711	0/0:108,0:73:52.98:0,53,1465	1/1:12,35:53:39.13:1894,39,0	1/1:6,8:18:12.04:604,12,0	1/1:12,0:12:16.95:479,17,0	1/1:46,0:46:82.92:1918,83,0	1/1:6,17:28:21.07:1057,21,0	0/0:45,0:45:90.30:0,90,2485	0/0:19,0:19:42.13:0,42,1080	1/1:9,24:38:23.91:1064,24,0	1/1:8,29:37:42.14:1971,42,0	1/1:7,22:34:30.10:1456,30,0	1/1:13,33:49:48.16:2360,48,0	0/0:39,0:39:99:0,105,3090	1/1:10,12:24:15.05:755,15,0	1/1:6,11:23:24.08:1189,24,0	1/1:4,17:24:60.18:1719,60,0	1/1:11,19:33:27.09:1297,27,0	1/1:23,6:28:8.92:168,9,0	1/1:12,22:37:15.05:754,15,0	1/1:7,17:29:23.78:1206,24,0	1/1:7,6:15:9.03:342,9,0	1/1:5,15:23:18.06:905,18,0	1/1:15,29:50:7.83:3444,8,0	1/1:8,17:27:15.05:756,15,0	1/1:17,10:28:21.07:1058,21,0
chr10	109625981	.	C	CATGT	4608.51	PASS	AB=0.990;AC=15;AF=0.268;AN=56;BaseQRankSum=15.110;DP=1116;FS=4.819;HRun=0;HaplotypeScore=299.0665;InbreedingCoeff=-0.2002;MQ=54.40;MQ0=6;MQRankSum=-11.463;QD=9.93;ReadPosRankSum=-7.557;VQSLOD=1.5273;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:41:99:334,0,753	0/0:10,0:10:30.09:0,30,592	0/0:44,0:26:24.54:0,25,1022	0/0:56,0:39:94.94:0,95,1584	0/1:33,0:33:99:112,0,525	0/1:19,0:19:99:179,0,334	0/1:41,0:42:99:412,0,309	0/1:60,0:60:99:347,0,1956	0/1:46,1:47:99:852,0,759	0/0:54,0:54:99:0,156,3061	0/0:29,0:29:87.28:0,87,1745	0/0:61,0:61:99:0,156,3213	0/0:49,0:49:99:0,132,2631	0/0:53,0:53:99:0,150,3062	0/0:51,0:51:99:0,135,2753	0/0:51,0:51:99:0,150,3014	0/1:24,1:24:99:262,0,428	0/1:22,2:24:99:441,0,328	0/1:23,0:22:99:152,0,829	0/1:31,0:31:99:422,0,187	0/0:87,0:87:24.19:0,24,1208	0/0:34,0:34:99:0,102,2088	0/0:23,0:23:69.23:0,69,1354	0/0:49,0:49:99:0,123,2449	0/1:22,0:22:29.29:29,0,363	0/1:61,0:61:99:835,0,1955	0/1:28,0:28:99:108,0,360	1/1:7,0:7:8.91:124,9,0
chr10	109625982	.	C	CTGTGTGTGCATGTA	22623.78	PASS	AB=0.952;AC=30;AF=0.536;AN=56;BaseQRankSum=1.367;DP=1205;FS=8.089;HRun=0;HaplotypeScore=442.4213;InbreedingCoeff=0.7912;MQ=53.22;MQ0=5;MQRankSum=-10.673;QD=33.22;ReadPosRankSum=-8.177;VQSLOD=1.3923;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:38,7:44:50.71:1690,51,0	0/0:10,0:10:18.06:0,18,571	0/1:42,0:24:26.89:27,0,39	0/0:54,0:38:46.03:0,46,690	1/1:10,24:39:9.03:403,9,0	1/1:8,13:23:11.84:572,12,0	1/1:47,0:47:34.19:1253,34,0	1/1:65,0:65:99:2616,111,0	1/1:39,11:50:77.91:3100,78,0	0/0:55,0:55:99:0,108,3807	0/0:29,0:29:63.20:0,63,2132	0/0:62,0:62:99:0,120,3805	0/0:48,0:48:99:0,99,3096	0/0:55,0:55:99:0,123,3984	0/0:53,0:53:95.30:0,95,2745	0/0:51,0:51:99:0,123,4495	0/1:25,3:27:16.56:1163,0,17	1/1:24,3:27:13.08:1577,13,0	1/1:15,9:25:33.06:1168,33,0	1/1:6,30:41:30.10:1416,30,0	1/1:49,49:110:5.25:283,5,0	0/0:34,0:34:75.24:0,75,2851	0/0:23,0:23:45.13:0,45,1487	0/0:50,0:50:93.13:0,93,3190	1/1:8,20:29:3.01:142,3,0	1/1:54,11:65:52.83:5788,53,0	1/1:8,22:34:14.95:861,15,0	1/1:1,8:9:9.03:567,9,0
chr10	109626006	.	A	ATG	2688.68	PASS	AB=0.945;AC=13;AF=0.232;AN=56;BaseQRankSum=14.315;DP=1147;FS=13.790;HRun=0;HaplotypeScore=282.3275;InbreedingCoeff=-0.3100;MQ=52.09;MQ0=1;MQRankSum=-9.937;QD=5.60;ReadPosRankSum=-1.500;VQSLOD=1.4405;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:40,5:44:99:294,0,757	0/0:9,0:9:21.07:0,21,320	0/0:26,0:18:45.15:0,45,653	0/0:40,0:33:85.86:0,86,1197	0/1:38,0:38:20.90:21,0,357	0/1:16,0:16:69.59:70,0,74	0/1:31,18:49:29.55:30,0,668	0/1:58,3:61:99:500,0,1540	0/1:55,4:59:99:567,0,743	0/0:56,0:56:99:0,160,2412	0/0:28,0:28:84.27:0,84,1260	0/0:60,0:60:99:0,166,2477	0/0:53,0:53:99:0,150,2235	0/0:52,0:52:99:0,154,2313	0/0:54,0:54:99:0,136,1996	0/0:52,0:52:99:0,154,2322	0/1:24,1:24:98.13:98,0,416	0/1:24,1:25:99:186,0,441	0/1:17,0:17:9.54:10,0,388	0/1:37,0:37:99:168,0,185	0/0:106,2:108:19.50:0,20,1334	0/0:32,0:32:93.30:0,93,1403	0/0:26,0:26:75.20:0,75,1080	0/0:47,0:47:99:0,129,1870	0/0:24,0:24:0.17:0,0,253	0/1:50,11:61:99:839,0,849	0/1:31,0:31:48.91:49,0,310	0/1:16,0:16:7.65:8,0,507
chr10	109628045	.	CCGG	C	724.09	PASS	AB=1.000;AC=35;AF=0.761;AN=46;BaseQRankSum=-2.935;DP=197;FS=4.172;HRun=0;HaplotypeScore=29.7568;InbreedingCoeff=0.5250;MQ=94.91;MQ0=3;MQRankSum=-3.541;QD=6.70;ReadPosRankSum=-0.339;VQSLOD=1.4316;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:8.85:62,9,0	0/0:1,0:1:2.99:0,3,23	0/0:41,0:16:22.85:0,23,255	0/0:20,0:9:9.54:0,10,115	1/1:0,5:5:2.80:13,3,0	1/1:6,0:6:5.84:35,6,0	1/1:13,0:14:14.62:92,15,0	1/1:4,0:4:5.88:43,6,0	1/1:2,0:2:2.97:20,3,0	0/0:3,0:3:2.98:0,3,21	./.	1/1:8,0:8:0.19:0,0,0	./.	1/1:6,0:6:5.94:41,6,0	1/1:6,0:6:2.99:24,3,0	0/0:1,0:1:3:0,3,27	./.	1/1:5,0:5:11.91:85,12,0	1/1:4,0:4:8.96:70,9,0	./.	1/1:14,0:14:2.19:7,2,0	1/1:4,0:4:8.98:73,9,0	1/1:1,0:1:2.84:14,3,0	1/1:9,0:9:11.94:93,12,0	./.	1/1:6,0:6:14.80:101,15,0	1/1:6,0:6:11.91:88,12,0	0/1:1,0:1:0:0,0,0
chr10	109628064	.	G	GCC	4448.40	PASS	AC=28;AF=0.583;AN=48;BaseQRankSum=-3.785;DP=234;FS=10.186;HRun=0;HaplotypeScore=41.4045;InbreedingCoeff=0.8061;MQ=82.32;MQ0=4;MQRankSum=-1.919;QD=31.11;ReadPosRankSum=1.046;VQSLOD=5.4586;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,1:13:29.99:331,30,0	0/0:1,0:1:3.01:0,3,39	0/0:34,0:10:5.36:0,5,108	0/0:21,0:14:23.49:0,23,249	./.	1/1:11,0:11:30.10:417,30,0	1/1:13,3:16:33.68:430,34,0	1/1:0,6:7:18.04:243,18,0	1/1:8,0:8:15.03:191,15,0	0/0:2,0:2:3.01:0,3,39	./.	0/0:8,0:8:17.64:0,18,216	0/0:2,0:2:6.02:0,6,77	0/0:6,0:6:12.04:0,12,147	./.	./.	1/1:17,0:17:38.83:523,39,0	1/1:14,0:14:39.12:526,39,0	1/1:12,0:12:26.15:345,26,0	1/1:1,0:1:3.01:44,3,0	1/1:9,0:9:18.05:236,18,0	0/0:4,0:4:6.02:0,6,74	0/0:1,0:1:0:0,0,0	0/0:9,0:9:27.04:0,27,317	1/1:5,0:6:12.03:151,12,0	1/1:9,0:9:24.03:299,24,0	1/1:11,0:11:18.60:348,19,0	1/1:9,0:9:27.09:365,27,0
chr10	109628118	.	G	GTT	3968.37	PASS	AB=0.535;AC=42;AF=0.750;AN=56;BaseQRankSum=0.577;DP=350;FS=13.753;HRun=9;HaplotypeScore=79.6283;InbreedingCoeff=0.7661;MQ=82.99;MQ0=1;MQRankSum=-3.805;QD=13.68;ReadPosRankSum=3.048;VQSLOD=0.4605;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:20:19.51:125,20,0	0/0:3,0:3:9.02:0,9,96	0/0:16,0:13:11.74:0,12,104	0/0:17,0:15:16.37:0,16,205	0/1:1,1:11:3.46:95,0,3	1/1:1,0:16:30.40:113,30,0	1/1:2,0:18:34.93:120,35,0	1/1:7,0:11:10.47:48,10,0	1/1:0,0:8:14.97:51,15,0	0/0:13,0:13:33.03:0,33,336	0/0:4,0:4:12.03:0,12,128	1/1:1,15:18:50.14:710,50,0	1/1:1,4:5:9.03:137,9,0	1/1:1,8:10:24:340,24,0	1/1:1,5:6:11.72:184,12,0	0/0:7,0:7:21.05:0,21,223	1/1:2,0:21:37.90:129,38,0	1/1:3,0:25:50.90:174,51,0	1/1:0,0:20:45.17:171,45,0	1/1:2,0:9:17.72:67,18,0	0/1:2,0:12:8.96:45,0,9	1/1:0,5:6:18.06:260,18,0	1/1:0,4:4:9.50:139,10,0	1/1:4,12:16:42.57:603,43,0	1/1:1,1:16:29.98:140,30,0	1/1:2,1:23:53.29:232,53,0	1/1:4,0:11:17.47:60,17,0	1/1:0,0:4:7.49:26,7,0
chr10	109628610	.	AAAGGAAGG	A	1973.96	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.256;DP=464;FS=1.481;HRun=0;HaplotypeScore=121.9165;InbreedingCoeff=0.9094;MQ=59.59;MQ0=4;MQRankSum=-7.256;QD=22.95;ReadPosRankSum=-0.426;VQSLOD=3.0433;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:26:30.05:0,30,671	0/0:7,0:7:9.03:0,9,371	0/0:9,0:7:6.02:0,6,138	0/0:20,0:16:7.55:0,8,131	1/1:5,13:18:17.89:295,18,0	1/1:8,6:15:21:452,21,0	1/1:17,11:28:20.89:382,21,0	0/0:15,0:15:24.08:0,24,704	1/1:4,9:13:27.09:675,27,0	0/0:13,0:13:21.07:0,21,866	0/0:11,0:11:21.07:0,21,839	0/0:21,0:21:33.11:0,33,1360	0/0:14,0:14:33.09:0,33,1158	0/0:13,0:13:33.11:0,33,1157	0/0:19,0:19:42.14:0,42,1671	0/0:15,0:15:39.13:0,39,1587	0/0:16,0:21:30.99:0,31,817	0/0:17,0:20:27.09:0,27,795	0/0:24,0:21:21.07:0,21,634	0/0:10,0:12:18.06:0,18,524	0/0:21,0:22:24.08:0,24,534	0/0:11,0:11:24.07:0,24,789	0/0:13,0:13:33.11:0,33,1316	0/0:29,0:29:51.18:0,51,2052	1/1:5,7:11:15.05:341,15,0	0/0:17,0:19:36.12:0,36,1041	0/0:10,0:16:36.10:0,36,950	0/0:7,0:6:6.02:0,6,165
chr10	109631008	.	AAAAAAAAAG	A	2932.53	PASS	AB=0.980;AC=37;AF=0.661;AN=56;BaseQRankSum=2.091;DP=542;FS=40.495;HRun=0;HaplotypeScore=111.0076;InbreedingCoeff=0.3934;MQ=41.95;MQ0=61;MQRankSum=-0.210;QD=6.98;ReadPosRankSum=-3.149;VQSLOD=-0.2076;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:24:30.67:313,31,0	0/0:8,0:8:16.53:0,17,164	0/0:42,0:3:3.78:0,4,12	0/1:49,0:9:1.26:1,0,3	0/1:28,0:27:35.86:36,0,177	0/1:11,0:11:99:140,0,132	0/1:17,0:15:10.21:10,0,174	1/1:23,0:19:18.62:116,19,0	0/1:7,0:7:60.89:61,0,65	0/0:25,0:21:38.91:0,39,685	0/0:21,0:21:32.03:0,32,666	1/1:18,0:16:2.28:51,2,0	1/1:9,0:9:0.60:23,1,0	0/1:11,0:8:7.96:8,0,13	0/1:15,3:18:10.67:238,0,11	0/0:8,0:8:19.18:0,19,409	1/1:30,0:25:15.90:304,16,0	1/1:29,0:27:6.79:271,7,0	1/1:20,0:9:12.36:90,12,0	1/1:17,0:16:18.75:275,19,0	1/1:6,0:5:7.21:48,7,0	1/1:14,2:15:28.78:202,29,0	1/1:9,14:21:12.67:283,13,0	1/1:20,0:16:14.59:58,15,0	0/0:18,0:17:20.95:0,21,184	1/1:14,0:12:24.87:199,25,0	1/1:17,0:17:20.37:230,20,0	1/1:9,0:7:15.44:161,15,0
chr10	109631292	.	GACAC	G	8269.59	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.232;DP=657;FS=3.473;HRun=0;HaplotypeScore=109.7154;InbreedingCoeff=0.9988;MQ=64.25;MQ0=4;MQRankSum=-0.763;QD=35.49;ReadPosRankSum=1.741;VQSLOD=4.9214;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,20:25:27.67:672,28,0	0/0:13,0:13:39.13:0,39,888	0/0:35,0:25:50.64:0,51,943	0/0:28,0:20:32.60:0,33,790	0/0:28,0:30:86.80:0,87,1925	0/0:18,0:18:51.16:0,51,1232	0/0:17,0:17:48.16:0,48,1070	1/1:3,25:28:72.21:1158,72,0	0/0:23,0:23:63.22:0,63,1522	0/0:27,0:27:78.11:0,78,1758	0/0:19,0:18:39.13:0,39,909	0/0:23,0:23:60.21:0,60,1471	0/0:23,0:24:66:0,66,1511	0/0:23,0:23:60.21:0,60,1492	0/0:35,0:35:99:0,102,2435	0/0:28,0:28:69.20:0,69,1602	1/1:6,23:29:57.19:945,57,0	1/1:4,20:24:48.16:824,48,0	1/1:4,11:14:33.10:530,33,0	1/1:1,12:13:32.98:471,33,0	1/1:7,34:41:93.32:1589,93,0	0/0:9,0:10:23.87:0,24,536	0/0:20,0:19:45.15:0,45,1103	0/0:22,0:22:60.17:0,60,1349	0/0:29,0:29:64.72:0,65,1632	1/1:3,22:24:60.14:909,60,0	1/1:0,21:20:51.09:875,51,0	1/1:0,12:12:20.99:297,21,0
chr10	109631653	.	A	ATCCAACTGTT	44616.25	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-1.823;DP=493;FS=6.212;HRun=0;HaplotypeScore=150.3177;InbreedingCoeff=0.9972;MQ=67.82;MQ0=0;MQRankSum=-13.417;QD=115.59;ReadPosRankSum=0.955;VQSLOD=5.5350;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,15:28:72.20:3133,72,0	0/0:9,0:9:24.08:0,24,800	0/0:21,0:21:60.19:0,60,1704	0/0:15,0:15:44.29:0,44,1116	1/1:8,12:23:54.14:2373,54,0	1/1:6,6:13:36.12:1560,36,0	1/1:12,8:25:57.19:2461,57,0	1/1:13,2:18:48.16:1923,48,0	1/1:2,9:15:33.11:1724,33,0	0/0:17,0:17:51.17:0,51,1622	0/0:24,0:24:57.18:0,57,1776	1/1:9,14:24:57.20:2911,57,0	1/1:6,10:16:48.16:2418,48,0	1/1:9,8:20:51.13:2472,51,0	1/1:10,10:21:54.18:2310,54,0	0/0:21,0:21:44.42:0,44,1976	1/1:7,8:16:39.09:1686,39,0	1/1:7,9:19:39.13:1980,39,0	1/1:9,4:13:36.12:1599,36,0	1/1:6,7:14:36.12:1866,36,0	1/1:7,5:12:30.06:988,30,0	1/1:5,9:16:39.13:1696,39,0	1/1:0,8:8:24.08:1276,24,0	1/1:6,3:11:18.03:699,18,0	1/1:8,6:16:36.08:1505,36,0	1/1:7,8:16:38.80:1994,39,0	1/1:13,14:27:78.27:3911,78,0	1/1:4,10:14:42.14:2131,42,0
chr10	109631742	.	C	CTTTT	10853.44	PASS	AB=0.800;AC=43;AF=0.768;AN=56;BaseQRankSum=2.256;DP=412;FS=31.461;HRun=9;HaplotypeScore=105.2058;InbreedingCoeff=0.8689;MQ=62.59;MQ0=1;MQRankSum=-5.077;QD=35.59;ReadPosRankSum=-3.737;VQSLOD=0.5644;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,8:19:48.16:913,48,0	0/0:9,0:9:17.98:0,18,239	0/0:11,0:11:12.71:0,13,238	0/0:11,0:10:8.59:0,9,108	1/1:19,0:21:45.14:808,45,0	1/1:5,0:9:15.05:273,15,0	1/1:3,0:7:3.01:58,3,0	1/1:9,9:18:30.09:533,30,0	1/1:10,0:10:7.84:118,8,0	0/0:26,0:26:63.14:0,63,918	0/0:26,0:27:66.11:0,66,902	1/1:13,0:16:16.33:326,16,0	1/1:6,0:8:15.05:287,15,0	1/1:10,0:11:12.04:185,12,0	1/1:10,0:11:12.04:205,12,0	0/0:22,0:22:59.96:0,60,857	1/1:7,11:18:51.17:1137,51,0	1/1:12,4:17:40.95:761,41,0	1/1:5,4:10:24.08:476,24,0	1/1:13,6:20:52.72:916,53,0	1/1:4,2:6:12.04:246,12,0	1/1:12,0:16:27.09:502,27,0	1/1:8,1:13:15.10:223,15,0	0/1:3,0:4:0:0,0,0	1/1:9,0:9:12.04:194,12,0	1/1:8,1:22:42.09:702,42,0	1/1:14,6:21:53.39:1055,53,0	1/1:4,12:16:42.10:936,42,0
chr10	109633568	.	CTCCTCCTGT	C	8944.88	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=8.372;DP=438;FS=0.000;HRun=0;HaplotypeScore=155.7934;InbreedingCoeff=0.8586;MQ=68.41;MQ0=3;MQRankSum=-9.368;QD=26.23;ReadPosRankSum=1.197;VQSLOD=4.2980;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:34:30.10:613,30,0	0/0:7,0:7:18.06:0,18,730	0/0:25,0:20:12.04:0,12,462	0/0:20,0:15:15.94:0,16,335	1/1:7,6:13:18.06:471,18,0	1/1:9,5:14:15.05:419,15,0	1/1:14,5:19:21.06:493,21,0	0/1:30,0:30:0:0,0,0	1/1:8,5:13:18.06:502,18,0	0/0:22,0:22:42.14:0,42,1659	0/0:11,0:11:21.07:0,21,965	1/1:9,13:22:36.12:1005,36,0	1/1:3,5:8:9.03:251,9,0	1/1:3,3:6:12.03:276,12,0	1/1:8,9:17:24.08:649,24,0	0/0:12,0:12:27.09:0,27,1132	1/1:9,0:15:12.04:251,12,0	1/1:10,0:13:9.03:189,9,0	1/1:13,0:15:9.03:189,9,0	1/1:3,0:11:16.87:319,17,0	0/1:13,0:13:0.07:0,0,0	1/1:5,9:14:36.11:946,36,0	1/1:6,3:10:12.04:300,12,0	1/1:12,1:13:11.95:171,12,0	1/1:10,6:16:21.07:585,21,0	1/1:10,0:17:24.08:503,24,0	1/1:13,0:21:27.09:566,27,0	1/1:1,0:5:12.04:246,12,0
chr10	109633583	.	CTGT	C	2346.28	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=12.487;DP=399;FS=19.712;HRun=0;HaplotypeScore=125.6143;InbreedingCoeff=0.1420;MQ=62.60;MQ0=4;MQRankSum=-9.322;QD=8.26;ReadPosRankSum=7.949;VQSLOD=0.6886;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:27:29.93:254,30,0	0/0:7,0:7:21.07:0,21,497	0/0:31,0:23:42.07:0,42,1084	0/0:32,0:17:27.82:0,28,681	0/1:13,0:13:46.98:47,0,269	0/1:13,0:13:49.76:50,0,232	0/1:13,0:13:40.85:41,0,340	1/1:14,6:20:15.04:206,15,0	0/1:12,0:12:62.36:62,0,252	0/0:20,0:20:60.20:0,60,1325	0/0:11,0:11:33.11:0,33,772	0/1:19,0:18:99:144,0,164	0/1:10,0:9:26.67:27,0,232	0/1:5,0:5:32.90:33,0,103	0/1:14,0:14:74.16:74,0,262	0/0:13,0:13:39.13:0,39,878	1/1:11,0:11:11.95:90,12,0	1/1:8,0:8:8.97:68,9,0	1/1:9,0:8:18:217,18,0	1/1:10,0:10:20.96:201,21,0	1/1:11,0:11:14.71:202,15,0	0/1:16,0:16:99:128,0,207	0/1:11,0:11:20.49:20,0,185	0/1:8,0:8:0.56:1,0,190	0/1:16,0:16:68.82:69,0,301	1/1:15,0:15:26.93:234,27,0	1/1:18,0:18:29.91:255,30,0	1/1:4,0:4:11.98:115,12,0
chr10	109633610	.	G	GTT	5619.44	PASS	AB=0.815;AC=36;AF=0.643;AN=56;BaseQRankSum=0.586;DP=568;FS=4.036;HRun=10;HaplotypeScore=162.5211;InbreedingCoeff=0.7608;MQ=63.87;MQ0=9;MQRankSum=-4.755;QD=18.42;ReadPosRankSum=-2.258;VQSLOD=1.7518;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:43.96:0,44,272	0/1:4,0:4:18.85:19,0,50	0/0:65,0:26:34.76:0,35,300	0/0:58,0:20:13.82:0,14,162	1/1:9,10:23:30.06:408,30,0	0/1:7,6:16:0.51:292,0,1	1/1:7,8:18:47.45:525,47,0	0/0:14,0:14:16.51:0,17,79	1/1:13,2:15:21.02:258,21,0	0/0:20,0:20:35.98:0,36,346	0/0:12,0:12:20.98:0,21,213	1/1:15,6:21:38.98:464,39,0	1/1:10,4:13:29.99:350,30,0	1/1:4,1:9:11.99:129,12,0	1/1:13,2:15:26.49:288,26,0	0/0:20,0:20:41.84:0,42,403	0/0:22,0:22:2.55:0,3,255	0/0:15,0:17:2.68:0,3,157	1/1:4,1:13:30.01:304,30,0	1/1:16,1:23:0.31:304,0,0	1/1:1,2:9:13.22:109,13,0	1/1:7,8:18:29.13:391,29,0	1/1:6,4:12:15.05:213,15,0	1/1:3,7:11:21.46:261,21,0	1/1:7,10:20:27.04:350,27,0	1/1:9,2:24:9.95:421,10,0	1/1:10,3:25:33.50:358,34,0	1/1:4,2:7:18.88:176,19,0
chr10	109633620	.	TG	T	858.90	PASS	AB=0.978;AC=17;AF=0.304;AN=56;BaseQRankSum=-1.396;DP=550;FS=21.744;HRun=10;HaplotypeScore=121.6229;InbreedingCoeff=0.5272;MQ=61.99;MQ0=17;MQRankSum=0.223;QD=4.23;ReadPosRankSum=-3.392;VQSLOD=-0.7014;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:28,3:32:61.75:135,0,62	0/1:5,0:5:6.56:7,0,57	0/0:60,0:16:20.87:0,21,175	0/0:60,2:20:21.04:0,21,148	0/0:21,0:19:30.36:0,30,233	0/0:16,0:15:25.16:0,25,210	0/0:18,0:18:0.06:0,0,197	0/1:17,0:14:7.69:66,0,8	0/0:11,0:13:19.34:0,19,194	0/0:17,1:18:15.74:0,16,339	0/0:12,0:12:29.94:0,30,290	0/0:13,0:15:41.35:0,41,314	0/0:10,0:10:17.73:0,18,128	0/0:9,0:10:17.68:0,18,109	0/0:11,0:12:35.81:0,36,300	0/0:19,0:19:43.11:0,43,399	0/1:22,0:22:19.65:20,0,117	0/1:19,0:19:23.45:23,0,77	1/1:11,0:11:20.24:85,20,0	1/1:23,2:25:24.86:236,25,0	1/1:10,0:10:4.30:39,4,0	0/0:14,0:14:22.88:0,23,155	0/0:13,0:14:22.75:0,23,174	0/0:9,0:10:20.73:0,21,157	0/0:20,0:19:23.03:0,23,233	1/1:24,0:24:22.42:163,22,0	1/1:31,0:28:38.62:232,39,0	1/1:7,0:7:10.97:40,11,0
chr10	109634968	.	G	GTTTA	2367.80	PASS	AC=26;AF=0.684;AN=38;BaseQRankSum=-4.698;DP=251;FS=1.085;HRun=0;HaplotypeScore=40.2296;InbreedingCoeff=0.6227;MQ=59.16;MQ0=5;MQRankSum=2.311;QD=15.28;ReadPosRankSum=1.752;VQSLOD=2.8971;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,5:12:12.04:285,12,0	0/0:6,0:6:12.03:0,12,164	./.	./.	./.	0/0:2,0:14:14.76:0,15,139	./.	1/1:30,0:21:8.95:68,9,0	./.	0/0:12,0:12:15.03:0,15,193	0/0:2,0:2:2.99:0,3,24	1/1:6,5:11:6.02:143,6,0	1/1:2,1:3:3.01:71,3,0	1/1:1,2:3:3.01:71,3,0	1/1:3,4:7:3.01:71,3,0	0/0:4,0:4:3.01:0,3,45	1/1:9,16:25:27.09:642,27,0	1/1:11,15:26:18.06:428,18,0	1/1:10,0:6:6.02:112,6,0	1/1:1,2:3:6.02:143,6,0	./.	./.	./.	./.	0/0:5,0:13:9.01:0,9,84	1/1:5,0:5:3.01:51,3,0	1/1:5,7:12:12.04:283,12,0	1/1:2,5:7:6.02:143,6,0
chr10	109635307	.	AAG	A	271.03	PASS	AB=0.957;AC=13;AF=0.232;AN=56;BaseQRankSum=2.581;DP=401;FS=9.786;HRun=0;HaplotypeScore=59.7362;InbreedingCoeff=-0.0048;MQ=51.01;MQ0=23;MQRankSum=-6.474;QD=1.98;ReadPosRankSum=-3.472;VQSLOD=-0.5355;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:51.97:0,52,555	0/1:4,0:4:0.38:0,0,81	0/0:15,0:5:14.99:0,15,136	0/1:17,0:7:0.31:0,0,39	0/0:19,1:17:5.91:0,6,290	0/0:25,0:25:30.98:0,31,413	0/0:15,0:11:11.76:0,12,161	0/1:31,1:31:6.20:6,0,507	0/0:14,0:13:11.67:0,12,175	0/0:7,0:6:13.12:0,13,131	0/0:11,0:10:15.24:0,15,283	0/1:5,0:5:12.55:35,0,13	0/1:8,1:9:9.06:58,0,9	1/1:12,0:11:10.11:127,10,0	0/1:9,0:7:2.29:2,0,26	0/0:15,0:15:19.16:0,19,333	0/0:25,0:23:21.70:0,22,292	0/0:15,0:11:9.87:0,10,250	0/0:20,0:17:32.68:0,33,311	0/0:8,0:8:14.68:0,15,121	0/0:9,0:7:8.77:0,9,79	0/1:3,1:3:16.33:29,0,16	0/1:5,1:5:7.77:34,0,8	0/1:13,0:11:10.81:101,0,11	0/0:15,0:13:20.93:0,21,242	0/0:12,0:11:26.83:0,27,289	0/1:22,0:20:6.67:7,0,177	0/1:4,0:4:11.21:11,0,50
chr10	109639037	.	C	CA	2125.75	PASS	AB=0.831;AC=38;AF=0.679;AN=56;BaseQRankSum=0.551;DP=614;FS=0.628;HRun=17;HaplotypeScore=93.1747;InbreedingCoeff=-0.0014;MQ=70.52;MQ0=6;MQRankSum=-0.196;QD=3.77;ReadPosRankSum=-4.683;VQSLOD=-0.6909;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:40,1:45:18.11:153,0,18	0/1:8,0:10:16.69:17,0,23	0/1:40,0:21:4.85:5,0,25	0/0:19,0:11:2.22:0,2,6	1/1:9,2:20:28.09:164,28,0	1/1:21,3:24:41.51:259,42,0	1/1:8,2:22:0.68:20,1,0	1/1:16,11:27:2.07:156,2,0	1/1:11,2:28:5.82:36,6,0	0/0:17,1:20:21.56:0,22,113	0/0:9,0:10:7.82:0,8,44	1/1:16,0:16:34.71:201,35,0	1/1:6,1:16:5.89:39,6,0	1/1:17,0:18:17.87:113,18,0	1/1:22,0:22:24.74:128,25,0	0/1:21,0:22:20.11:20,0,35	0/1:17,7:26:13.91:33,0,14	0/1:7,14:21:9.56:17,0,10	0/1:6,2:9:0.76:66,0,1	0/1:18,3:21:9.27:90,0,9	0/1:11,1:12:3.75:47,0,4	1/1:12,1:25:23.16:128,23,0	1/1:12,0:15:24.03:117,24,0	1/1:32,0:32:49.12:258,49,0	0/1:10,0:16:2.78:32,0,3	0/1:13,7:29:4.59:108,0,5	1/1:18,11:29:6.87:43,7,0	0/1:11,3:15:29.30:29,0,35
chr10	109639840	.	T	TA	945.16	PASS	AB=0.829;AC=13;AF=0.241;AN=54;BaseQRankSum=-2.372;DP=477;FS=2.839;HRun=12;HaplotypeScore=55.1612;InbreedingCoeff=0.6847;MQ=70.91;MQ0=4;MQRankSum=-0.094;QD=8.44;ReadPosRankSum=1.094;VQSLOD=2.3843;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:48.21:0,48,515	0/0:6,0:6:8.91:0,9,66	0/0:27,0:16:12.82:0,13,61	0/1:16,0:6:0.01:0,0,0	0/0:11,1:12:7.40:0,7,156	0/0:17,0:17:38.76:0,39,285	0/0:12,0:12:21.72:0,22,153	0/0:31,0:31:53.50:0,54,387	0/0:14,0:14:29.75:0,30,217	0/0:12,0:12:29.76:0,30,218	0/0:11,0:11:29.83:0,30,219	1/1:5,16:21:23.83:228,24,0	1/1:4,10:14:15.02:146,15,0	1/1:4,10:15:30.01:282,30,0	1/1:3,7:11:4.96:192,5,0	0/0:15,0:16:25.82:0,26,181	0/0:28,0:28:56.63:0,57,416	0/0:26,0:26:74.54:0,75,546	0/0:14,0:16:23.96:0,24,147	0/0:9,0:9:17.87:0,18,131	0/1:14,1:15:2.18:2,0,166	1/1:2,1:3:3:29,3,0	./.	0/1:3,14:17:10.78:224,0,11	0/0:13,0:13:16.97:0,17,130	0/0:27,0:27:27.81:0,28,357	0/0:28,0:29:37.70:0,38,268	0/0:15,0:15:6.29:0,6,173
chr10	109640335	.	AGTGTGTGGTGTGTGTGTGTGTGTGTGTGTGT	A	307.83	PASS	AB=1.000;AC=5;AF=0.093;AN=54;BaseQRankSum=0.211;DP=482;FS=7.537;HRun=0;HaplotypeScore=286.2517;InbreedingCoeff=0.4026;MQ=62.43;MQ0=28;MQRankSum=-2.060;QD=11.84;ReadPosRankSum=-1.459;VQSLOD=1.1434;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:17:32.23:0,32,925	0/0:6,0:6:18.06:0,18,1194	0/0:49,0:27:62.20:0,62,1624	0/0:36,0:19:37.41:0,37,1513	./.	1/1:1,8:9:3.01:241,3,0	0/0:13,0:10:3.01:0,3,259	0/0:28,0:25:63.21:0,63,3494	0/1:12,0:11:50.96:51,0,198	0/0:20,0:19:54.18:0,54,4044	0/0:5,0:5:1.68:0,2,158	0/0:26,0:25:63.94:0,64,5760	0/0:18,0:18:41.93:0,42,3605	0/0:18,0:18:45.15:0,45,4012	0/0:23,0:23:45.14:0,45,3163	0/0:18,0:18:52.42:0,52,4781	0/0:20,0:19:36.12:0,36,2102	0/0:13,0:9:24.08:0,24,1638	0/0:14,0:13:36.12:0,36,1557	0/0:7,0:6:6.02:0,6,299	0/0:39,0:38:67.44:0,67,4385	0/0:6,0:6:9.03:0,9,784	0/0:4,0:3:5.78:0,6,565	0/0:18,0:17:36.08:0,36,2710	1/1:5,0:4:3.01:120,3,0	0/0:20,0:20:51.17:0,51,3724	0/0:21,0:21:51.16:0,51,3735	0/0:8,0:7:9.03:0,9,749
chr10	109645716	.	CGTGTGT	C	727.71	PASS	AB=0.926;AC=10;AF=0.185;AN=54;BaseQRankSum=2.321;DP=467;FS=0.000;HRun=0;HaplotypeScore=115.1214;InbreedingCoeff=0.3134;MQ=69.26;MQ0=7;MQRankSum=-1.308;QD=7.58;ReadPosRankSum=1.308;VQSLOD=2.2894;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:0:0,0,0	0/0:7,0:7:7.26:0,7,136	0/0:28,0:22:3.01:0,3,40	0/0:30,0:25:6.02:0,6,85	./.	0/1:7,5:12:24.98:231,0,25	1/1:10,1:12:5.23:45,5,0	0/0:20,0:16:12.04:0,12,193	1/1:7,3:10:18.05:270,18,0	0/0:11,0:13:15.03:0,15,247	0/0:6,0:7:9.03:0,9,170	0/0:21,0:20:12.37:0,12,197	0/0:19,0:19:18.52:0,19,290	0/1:17,0:17:4.40:4,0,75	0/1:13,0:12:6.74:7,0,23	0/0:10,0:12:27.05:0,27,496	0/0:27,0:27:9.82:0,10,60	0/0:26,0:26:7.21:0,7,113	0/1:16,0:16:0.43:0,0,72	0/0:6,0:6:3.01:0,3,46	0/0:58,0:58:6.47:0,6,70	0/0:9,0:9:3.90:0,4,50	0/0:9,0:9:0.44:0,0,1	0/0:17,0:17:6.02:0,6,79	1/1:10,6:16:18.06:303,18,0	0/0:22,0:21:25.23:0,25,379	0/0:10,0:10:0.14:0,0,36	0/0:10,0:9:3.01:0,3,30
chr10	109645752	.	TAG	T	2088.68	PASS	AB=0.810;AC=34;AF=0.654;AN=52;BaseQRankSum=1.818;DP=465;FS=1.342;HRun=0;HaplotypeScore=112.7812;InbreedingCoeff=0.1357;MQ=33.13;MQ0=37;MQRankSum=0.786;QD=6.67;ReadPosRankSum=1.689;VQSLOD=2.9746;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,7:16:0.19:1,0,0	0/1:8,1:9:17.36:17,0,99	./.	0/0:27,1:1:2.22:0,2,7	./.	1/1:20,1:21:13.02:74,13,0	1/1:14,4:16:6.32:54,6,0	0/0:28,1:21:14.01:0,14,374	1/1:12,0:10:9.93:123,10,0	0/1:11,0:10:24.63:25,0,250	0/0:10,1:10:10.97:0,11,91	1/1:12,3:14:18.83:199,19,0	1/1:9,3:12:25.49:222,25,0	0/1:8,3:11:6.44:78,0,6	1/1:12,4:15:1.65:141,2,0	0/1:12,1:12:46:46,0,105	0/1:10,11:20:40.17:104,0,40	1/1:5,2:7:12.91:144,13,0	0/1:18,7:21:99:213,0,160	0/0:7,2:7:1.04:0,1,3	0/0:18,26:40:1.99:0,2,18	1/1:10,0:10:9.02:104,9,0	1/1:5,3:8:1.23:42,1,0	1/1:15,8:22:3.86:29,4,0	1/1:21,0:20:10.13:109,10,0	0/1:18,8:22:7.39:380,0,7	1/1:6,0:6:10.12:74,10,0	1/1:5,4:8:8.37:61,8,0
chr10	109645753	.	AGG	A	1221.81	PASS	AB=0.987;AC=33;AF=0.635;AN=52;BaseQRankSum=2.727;DP=461;FS=1.387;HRun=2;HaplotypeScore=119.0544;InbreedingCoeff=0.1097;MQ=30.81;MQ0=35;MQRankSum=-0.660;QD=3.74;ReadPosRankSum=1.832;VQSLOD=-0.4220;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,2:16:2.51:15,3,0	0/0:9,0:9:8.77:0,9,136	./.	0/0:29,0:1:3:0,3,26	./.	1/1:21,0:21:11.59:69,12,0	1/1:17,0:16:2.54:18,3,0	0/1:28,0:21:42.67:43,0,288	1/1:12,0:10:13.03:97,13,0	0/1:11,0:10:15.77:16,0,269	0/0:11,0:10:11.99:0,12,128	1/1:13,0:13:10.77:79,11,0	1/1:12,0:12:15.14:93,15,0	0/1:11,0:11:0.91:34,0,1	0/1:15,0:15:0.18:53,0,0	0/1:14,0:12:9.69:10,0,197	0/1:20,1:20:42.25:61,0,42	1/1:7,0:7:11.77:76,12,0	0/1:25,0:21:99:108,0,115	0/0:8,0:7:1.24:0,1,3	0/0:44,0:40:4.66:0,5,23	1/1:10,0:10:6.66:39,7,0	1/1:7,0:8:1.25:18,1,0	1/1:23,0:22:3.24:15,3,0	0/1:21,0:20:0.12:64,0,0	0/1:23,1:21:16.13:270,0,16	1/1:5,0:5:11.74:85,12,0	1/1:9,0:8:11.99:107,12,0
chr10	109645754	.	GGT	G	1239.87	PASS	AB=0.882;AC=31;AF=0.620;AN=50;BaseQRankSum=2.512;DP=463;FS=0.786;HRun=0;HaplotypeScore=121.9316;InbreedingCoeff=-0.0347;MQ=30.80;MQ0=35;MQRankSum=-2.145;QD=3.77;ReadPosRankSum=-0.296;VQSLOD=2.8123;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,3:16:2.83:33,3,0	0/0:8,0:9:12:0,12,138	./.	0/0:29,0:1:3.01:0,3,43	./.	1/1:11,10:21:14.91:140,15,0	1/1:9,8:16:2.54:13,3,0	0/1:20,8:21:75.47:185,0,75	1/1:6,6:10:14.39:117,14,0	0/1:9,2:10:45.71:46,0,177	0/0:11,0:10:5.99:0,6,71	0/1:11,1:13:27.70:28,0,31	0/1:10,1:12:35.12:35,0,40	1/1:11,0:10:1.88:10,2,0	0/1:12,0:15:6.08:6,0,6	0/1:14,0:12:13.92:14,0,210	0/1:21,0:20:1.23:44,0,1	0/1:8,0:8:20.41:20,0,35	0/1:20,5:21:58.15:118,0,58	0/1:6,2:7:0:0,0,0	0/0:39,6:41:3.62:0,4,12	1/1:7,0:10:2.67:11,3,0	./.	1/1:20,1:22:3.35:12,3,0	1/1:11,9:20:12.01:128,12,0	0/1:20,5:21:28.01:189,0,28	1/1:1,4:5:9.03:110,9,0	1/1:6,4:9:11.90:125,12,0
chr10	109645771	.	GTA	G	663.97	PASS	AB=0.959;AC=18;AF=0.333;AN=54;BaseQRankSum=-0.831;DP=440;FS=12.061;HRun=0;HaplotypeScore=133.1325;InbreedingCoeff=-0.3844;MQ=36.73;MQ0=30;MQRankSum=-0.713;QD=2.54;ReadPosRankSum=2.568;VQSLOD=2.0207;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,1:16:7.32:7,0,27	0/0:7,0:7:14.85:0,15,203	0/1:30,0:2:1.77:2,0,11	0/0:37,0:3:5.91:0,6,75	./.	0/1:21,1:22:11.35:64,0,11	0/0:15,2:14:2.95:0,3,18	0/1:18,1:14:4.79:182,0,5	0/1:9,1:8:17.96:52,0,18	0/1:11,0:10:39.05:39,0,240	0/0:8,0:8:3.21:0,3,61	1/1:7,0:7:3.47:26,3,0	0/1:13,1:14:21.25:21,0,68	0/1:9,2:10:8.07:22,0,8	0/0:12,1:13:1.25:0,1,3	0/1:11,0:10:16.62:17,0,276	0/1:23,0:23:40.39:40,0,70	0/1:5,1:6:23.28:23,0,72	0/1:21,0:19:64.18:64,0,136	0/0:9,0:9:6.47:0,6,33	0/0:38,1:35:6.84:0,7,39	0/0:8,0:8:4.85:0,5,21	0/0:7,0:7:4.17:0,4,20	0/0:21,0:20:0.63:0,1,12	0/1:16,1:16:19.78:57,0,20	0/1:25,0:20:91.14:91,0,146	0/1:6,0:6:12.02:63,0,12	0/1:11,0:10:25.93:33,0,26
chr10	109645772	.	TAG	T	604.12	PASS	AB=0.923;AC=18;AF=0.333;AN=54;BaseQRankSum=-1.315;DP=432;FS=28.064;HRun=0;HaplotypeScore=135.0478;InbreedingCoeff=-0.4185;MQ=36.92;MQ0=30;MQRankSum=-1.010;QD=2.38;ReadPosRankSum=0.205;VQSLOD=0.8652;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,1:16:6.69:0,7,65	0/0:7,0:7:15.02:0,15,231	0/1:28,2:2:20.25:20,0,27	0/0:37,0:3:5.97:0,6,63	./.	0/1:20,2:22:23.79:24,0,51	0/1:17,0:14:9.17:9,0,30	0/1:12,5:12:6.80:205,0,7	0/1:9,1:8:24.36:24,0,81	0/1:9,2:10:64.74:65,0,234	0/1:8,0:8:7.77:8,0,55	1/1:7,0:7:8.55:51,9,0	0/1:14,0:14:23.49:23,0,48	0/1:9,2:10:23.90:24,0,26	0/0:10,2:12:5.97:0,6,21	0/1:10,1:10:31.19:31,0,300	0/1:14,9:23:75.68:76,0,167	0/1:6,0:6:16.15:16,0,105	0/1:17,2:17:74.82:75,0,224	0/0:6,2:8:5.16:0,5,33	0/0:32,5:33:1.67:0,2,66	0/0:6,1:7:5.15:0,5,23	0/0:6,1:7:4.25:0,4,36	0/0:15,6:20:0.98:0,1,36	0/1:17,0:16:29.80:30,0,59	0/1:25,0:21:36.27:36,0,253	0/1:6,0:6:28.08:35,0,28	0/0:12,0:11:16.01:0,16,128
chr10	109645786	.	TGA	T	804.26	PASS	AB=0.922;AC=24;AF=0.444;AN=54;BaseQRankSum=-0.136;DP=351;FS=3.423;HRun=0;HaplotypeScore=135.6295;InbreedingCoeff=-0.2303;MQ=38.68;MQ0=7;MQRankSum=-1.545;QD=3.13;ReadPosRankSum=-1.725;VQSLOD=1.8307;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,2:19:29.82:30,0,32	0/0:5,1:6:9.48:0,9,86	0/1:23,0:2:18.17:18,0,41	0/0:27,0:3:7.46:0,7,35	./.	0/1:16,5:22:7.04:159,0,7	1/1:14,4:14:0.77:42,1,0	0/0:6,0:4:5.98:0,6,46	0/1:8,1:8:35.10:35,0,44	0/1:5,0:5:19.46:33,0,19	0/0:6,1:7:3.46:0,3,25	1/1:7,3:10:5.99:66,6,0	1/1:10,4:14:18.99:213,19,0	0/0:8,2:9:0.18:0,0,2	0/0:6,3:9:3.41:0,3,10	0/1:12,0:11:48.60:49,0,89	0/1:15,1:16:20.10:21,0,20	0/1:4,1:5:30.41:30,0,44	0/1:9,1:10:35.11:35,0,102	0/1:5,1:6:24.19:37,0,24	0/1:20,2:22:2.05:2,0,22	1/1:7,0:7:4.17:20,4,0	0/0:7,1:8:2.96:0,3,19	1/1:10,5:15:0.97:3,1,0	0/1:16,1:16:31.85:32,0,47	0/1:18,1:18:81.29:81,0,161	0/1:7,0:7:4.10:43,0,4	0/0:11,0:10:2.40:0,2,46
chr10	109645790	.	TAGGC	T	304.59	PASS	AB=0.898;AC=15;AF=0.268;AN=56;BaseQRankSum=0.998;DP=313;FS=0.787;HRun=0;HaplotypeScore=134.8392;InbreedingCoeff=-0.1876;MQ=39.40;MQ0=6;MQRankSum=-0.071;QD=2.06;ReadPosRankSum=-1.585;VQSLOD=2.2411;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:19:17.21:0,17,76	0/0:6,0:6:8.50:0,9,148	0/1:23,0:2:2:2,0,42	0/0:19,1:4:7.71:0,8,29	0/0:7,0:7:0:0,0,0	0/1:20,0:21:46.96:47,0,48	0/0:13,3:12:0.09:0,0,10	0/0:2,0:2:6.02:0,6,78	0/0:7,0:6:10.39:0,10,92	0/1:2,2:4:36.16:100,0,36	0/0:7,0:7:3.47:0,3,28	1/1:9,0:10:4.44:19,4,0	0/1:13,0:14:32.60:70,0,33	0/0:6,2:8:2.58:0,3,11	0/0:8,0:8:3.91:0,4,23	0/1:9,0:8:14.86:15,0,205	0/0:12,1:14:8.01:0,8,63	0/1:4,1:5:35.40:35,0,109	0/1:6,2:8:47.53:48,0,108	0/1:6,0:6:17.27:17,0,48	0/0:21,0:20:0.13:0,0,20	0/0:6,0:6:2.80:0,3,13	0/0:7,0:7:2.99:0,3,25	1/1:12,1:13:1.30:4,1,0	0/0:12,0:12:12.04:0,12,83	0/1:15,0:15:47.60:48,0,279	0/1:6,0:7:15.15:31,0,15	0/1:10,0:10:2.02:2,0,76
chr10	109645792	.	GGC	G	2575.29	PASS	AB=0.785;AC=36;AF=0.692;AN=52;BaseQRankSum=2.138;DP=308;FS=5.637;HRun=0;HaplotypeScore=122.4074;InbreedingCoeff=0.0098;MQ=39.53;MQ0=7;MQRankSum=-0.396;QD=10.69;ReadPosRankSum=0.059;VQSLOD=3.2551;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,10:19:17.78:266,18,0	0/1:5,0:5:28.94:29,0,48	0/0:25,0:2:3.06:0,3,8	0/0:24,0:4:3.72:0,4,19	./.	1/1:12,9:21:29.85:373,30,0	1/1:12,4:12:7.94:80,8,0	./.	1/1:3,4:6:7.86:105,8,0	0/1:5,0:5:20.30:20,0,46	0/1:6,1:7:5.83:18,0,6	1/1:4,6:10:3.85:35,4,0	0/1:7,7:14:2.53:240,0,3	1/1:6,2:8:2.41:45,2,0	1/1:4,4:8:5.84:91,6,0	0/0:9,0:8:0.81:0,1,143	1/1:5,9:14:15.93:279,16,0	0/1:4,1:5:40.20:40,0,45	0/1:6,1:7:40.99:58,0,41	0/1:4,2:6:20.99:26,0,21	1/1:14,5:19:3.66:10,4,0	0/1:2,4:6:0.01:0,0,0	0/1:1,6:7:0:0,0,0	1/1:8,5:13:1.54:5,2,0	1/1:8,3:11:4.09:83,4,0	0/1:9,6:14:65.36:255,0,65	1/1:2,5:7:18.06:262,18,0	1/1:3,8:10:27.08:389,27,0
chr10	109645807	.	GTAGC	G	1457	PASS	AB=0.974;AC=29;AF=0.537;AN=54;BaseQRankSum=3.524;DP=310;FS=20.079;HRun=0;HaplotypeScore=128.4530;InbreedingCoeff=0.1534;MQ=40.56;MQ0=10;MQRankSum=0.044;QD=6.68;ReadPosRankSum=2.870;VQSLOD=1.3629;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,1:20:21.92:129,22,0	0/0:3,0:3:5.89:0,6,75	0/0:32,0:3:8.62:0,9,105	0/1:21,0:5:39.53:40,0,127	./.	1/1:21,0:21:11.97:161,12,0	1/1:12,0:10:5.33:44,5,0	1/1:2,0:2:5.78:31,6,0	0/1:6,0:5:3.32:56,0,3	0/1:5,0:5:37.27:37,0,143	0/0:5,0:5:2.74:0,3,12	0/1:13,0:13:0.34:18,0,0	0/1:15,1:16:14.38:187,0,14	0/1:7,1:8:2.93:35,0,3	1/1:7,0:8:4.16:61,4,0	0/0:10,0:9:3.10:0,3,280	1/1:15,0:15:22.04:195,22,0	0/1:7,0:7:6.56:7,0,36	0/1:6,0:6:17.22:64,0,17	0/0:5,0:5:2.94:0,3,22	1/1:12,2:14:0.18:1,0,0	0/0:6,0:6:2.27:0,2,8	0/0:11,0:10:4.51:0,5,15	0/0:10,1:11:0:0,0,0	1/1:11,0:11:10.40:79,10,0	0/1:14,1:14:83.36:164,0,83	1/1:8,0:8:22.93:149,23,0	1/1:10,0:10:23.18:152,23,0
chr10	109645808	.	TAGCTGC	T	2892.75	PASS	AB=0.929;AC=31;AF=0.574;AN=54;BaseQRankSum=1.597;DP=296;FS=13.297;HRun=0;HaplotypeScore=120.9843;InbreedingCoeff=0.0615;MQ=38.44;MQ0=10;MQRankSum=0.017;QD=12.63;ReadPosRankSum=1.925;VQSLOD=1.8344;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,1:18:21.17:218,21,0	0/0:3,0:3:6.02:0,6,102	0/0:30,0:3:8.61:0,9,109	0/1:19,1:4:62.35:62,0,112	./.	1/1:8,13:21:10.94:255,11,0	1/1:1,10:10:5.61:91,6,0	1/1:2,0:2:6.02:69,6,0	0/1:5,1:5:3.21:78,0,3	0/1:5,0:5:84.10:84,0,133	0/0:5,0:5:2.60:0,3,10	0/1:11,0:11:5.11:47,0,5	0/1:16,0:16:12.99:275,0,13	0/1:7,0:8:7.20:39,0,7	1/1:8,0:8:11.56:90,12,0	0/1:9,0:9:1.63:2,0,298	1/1:13,1:14:23.03:411,23,0	0/1:5,1:6:26.59:27,0,59	0/1:3,2:6:3.87:134,0,4	0/0:4,0:4:2.98:0,3,21	1/1:14,0:14:1.69:4,2,0	0/0:6,0:6:2.80:0,3,16	0/1:11,0:10:10.66:11,0,15	0/0:11,0:11:0:0,0,1	1/1:3,6:10:8.91:90,9,0	0/1:14,0:13:83.98:375,0,84	1/1:8,0:8:24.07:310,24,0	1/1:9,1:10:27.04:374,27,0
chr10	109645810	.	GCTGC	G	3205.06	PASS	AB=0.729;AC=42;AF=0.808;AN=52;BaseQRankSum=2.091;DP=291;FS=4.783;HRun=0;HaplotypeScore=114.2944;InbreedingCoeff=0.0513;MQ=38.62;MQ0=11;MQRankSum=-1.419;QD=12.98;ReadPosRankSum=0.485;VQSLOD=2.9347;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:18:26.80:273,27,0	0/1:2,0:3:16.97:17,0,26	0/0:29,0:3:5.61:0,6,95	0/1:21,0:4:21.39:21,0,93	./.	1/1:18,0:21:13.97:174,14,0	1/1:11,0:9:5.66:65,6,0	1/1:0,2:2:6.02:102,6,0	1/1:4,0:3:3.48:36,3,0	0/1:5,0:5:1.04:1,0,95	./.	0/1:3,2:10:7.66:78,0,8	1/1:5,3:15:33.10:325,33,0	0/1:1,1:9:7.61:56,0,8	1/1:2,0:8:8.01:75,8,0	0/1:6,0:9:47.63:48,0,124	1/1:3,12:15:36.26:510,36,0	1/1:3,3:6:4.17:79,4,0	1/1:3,1:4:6.90:86,7,0	1/1:1,3:4:2.91:17,3,0	1/1:7,6:13:1.42:3,1,0	1/1:2,2:6:4.24:27,4,0	0/1:2,2:9:4.05:36,0,4	0/1:5,0:12:0:0,0,0	1/1:9,0:10:2.37:61,2,0	1/1:5,8:12:25.28:499,25,0	1/1:3,5:8:24.07:338,24,0	1/1:2,7:9:27.08:407,27,0
chr10	109645818	.	TGTGC	T	1688.78	PASS	AB=0.966;AC=31;AF=0.554;AN=56;BaseQRankSum=2.812;DP=351;FS=3.591;HRun=0;HaplotypeScore=135.5619;InbreedingCoeff=0.0780;MQ=37.17;MQ0=14;MQRankSum=-1.685;QD=5.99;ReadPosRankSum=1.141;VQSLOD=2.7507;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:15.32:141,15,0	0/0:3,0:3:1.89:0,2,52	0/0:33,0:3:4.60:0,5,28	0/1:25,0:6:1.91:13,0,2	0/0:8,1:8:3.01:0,3,35	0/1:17,4:21:10.07:84,0,10	1/1:15,0:13:5.35:44,5,0	1/1:7,0:5:11.71:101,12,0	0/1:4,0:3:12.53:13,0,13	0/0:8,0:8:12.64:0,13,234	0/1:7,0:7:0.08:0,0,0	0/1:13,0:13:57.16:57,0,60	0/1:13,0:13:13.65:73,0,14	0/1:10,0:10:4.22:4,0,48	0/1:9,0:9:5.76:28,0,6	0/0:11,0:11:6.77:0,7,285	1/1:21,0:21:34.35:322,34,0	0/1:9,0:9:26.72:39,0,27	1/1:5,0:5:6.48:59,6,0	0/0:5,0:5:1.25:0,1,3	1/1:16,2:16:0.45:1,0,0	1/1:8,0:8:2.03:6,2,0	0/1:10,0:9:1.64:2,0,25	0/1:18,0:18:1.08:20,0,1	0/1:9,2:11:16.82:34,0,17	0/1:12,2:13:1.60:291,0,2	1/1:9,0:9:23.94:216,24,0	1/1:9,1:10:29.89:291,30,0
chr10	109647150	.	G	GA	18723.72	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-11.732;DP=565;FS=0.423;HRun=1;HaplotypeScore=51.9480;InbreedingCoeff=0.9949;MQ=84.24;MQ0=0;MQRankSum=-4.386;QD=40.35;ReadPosRankSum=2.742;VQSLOD=5.2854;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,47:47:99:1751,117,0	0/0:12,0:12:33.11:0,33,424	0/0:18,0:18:44.63:0,45,539	0/0:18,0:18:15.71:0,16,372	1/1:0,17:17:51.10:737,51,0	1/1:1,14:15:42.14:629,42,0	1/1:0,22:22:48.16:719,48,0	1/1:0,20:20:60.17:842,60,0	1/1:0,19:19:57.19:854,57,0	0/0:15,0:15:45.15:0,45,578	0/0:16,0:16:45.15:0,45,582	1/1:0,31:31:84.28:1258,84,0	1/1:0,19:19:54.18:809,54,0	1/1:0,22:22:60.20:898,60,0	1/1:0,12:12:29.74:449,30,0	0/0:21,1:22:18.24:0,18,733	1/1:0,41:40:99:1659,111,0	1/1:0,20:20:51.17:764,51,0	1/1:2,22:24:68.95:894,69,0	1/1:0,12:12:36.12:539,36,0	1/1:0,27:27:69.23:1034,69,0	1/1:0,11:11:27.09:404,27,0	1/1:0,10:10:27.09:405,27,0	1/1:0,21:21:60.20:899,60,0	1/1:0,12:12:33.11:494,33,0	1/1:0,29:29:87.29:1297,87,0	1/1:0,19:20:60.20:893,60,0	1/1:2,11:13:33.11:494,33,0
chr10	109648655	.	AC	A	1128.07	PASS	AB=0.800;AC=40;AF=0.714;AN=56;BaseQRankSum=1.798;DP=278;FS=8.120;HRun=2;HaplotypeScore=42.2885;InbreedingCoeff=0.2473;MQ=38.01;MQ0=21;MQRankSum=0.458;QD=4.86;ReadPosRankSum=1.845;VQSLOD=0.3853;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:16:0.84:53,1,0	0/0:2,0:2:2.21:0,2,33	0/1:21,0:4:0.31:0,0,29	0/0:22,0:3:9.02:0,9,97	1/1:4,0:4:2.60:10,3,0	1/1:9,0:8:7.50:51,7,0	1/1:14,0:13:10.62:51,11,0	1/1:8,0:7:1.32:3,1,0	1/1:11,0:11:2.15:27,2,0	0/0:9,0:7:9.48:0,9,95	0/0:2,0:2:3.01:0,3,34	1/1:3,10:12:17.34:228,17,0	1/1:2,6:8:6.88:79,7,0	0/1:6,2:8:25.02:40,0,25	0/1:3,12:15:5.28:279,0,5	0/0:11,0:11:20.54:0,21,204	1/1:13,0:12:5.39:43,5,0	0/1:10,0:10:0:0,0,0	1/1:7,0:4:2.49:6,2,0	1/1:1,1:4:2.60:10,3,0	1/1:15,0:13:0.15:0,0,0	1/1:1,1:2:3.01:38,3,0	0/1:6,2:7:24.73:68,0,25	0/1:5,6:11:54.77:169,0,55	1/1:10,0:10:8.68:67,9,0	1/1:9,0:7:5.17:27,5,0	1/1:10,0:8:3.62:12,4,0	1/1:3,0:3:2.71:12,3,0
chr10	109648656	.	C	CA	733.40	PASS	AB=0.870;AC=28;AF=0.500;AN=56;BaseQRankSum=4.278;DP=242;FS=2.983;HRun=1;HaplotypeScore=41.5360;InbreedingCoeff=0.1493;MQ=38.51;MQ0=22;MQRankSum=3.855;QD=4.34;ReadPosRankSum=2.977;VQSLOD=0.7589;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,4:11:21.49:88,0,21	0/0:2,0:2:4.26:0,4,44	0/1:19,0:3:18.82:19,0,36	0/0:22,0:3:9.03:0,9,113	1/1:1,3:4:3.01:48,3,0	0/1:7,2:8:1.23:71,0,1	1/1:6,5:11:8.61:130,9,0	0/0:7,0:6:8.54:0,9,28	0/1:9,2:11:1.77:72,0,2	0/0:7,0:6:9.90:0,10,116	0/0:2,0:2:3.01:0,3,42	1/1:13,0:12:9.75:37,10,0	1/1:8,0:8:3.58:10,4,0	0/1:6,1:7:33.45:58,0,33	0/1:16,0:15:18.04:18,0,19	0/0:10,0:10:23.09:0,23,268	1/1:5,0:4:5.07:53,5,0	0/0:6,0:6:10.18:0,10,30	0/0:5,0:2:4.07:0,4,12	1/1:3,1:4:3.01:48,3,0	0/0:11,1:10:0:0,0,0	1/1:2,0:2:1.27:4,1,0	0/1:7,1:7:2.82:3,0,36	0/1:11,0:11:5.20:5,0,67	1/1:7,1:8:2.86:101,3,0	0/1:6,1:6:5.14:38,0,5	1/1:6,2:6:3.01:48,3,0	0/1:1,1:2:0.52:38,0,1
chr10	109650997	.	GCACA	G	1337.96	PASS	AB=0.810;AC=22;AF=0.478;AN=46;BaseQRankSum=0.413;DP=551;FS=4.731;HRun=0;HaplotypeScore=112.5537;InbreedingCoeff=0.4980;MQ=55.19;MQ0=8;MQRankSum=-0.094;QD=4.54;ReadPosRankSum=0.418;VQSLOD=1.3938;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,1:25:26.88:125,0,27	1/1:4,2:6:3.01:46,3,0	./.	./.	0/0:11,0:13:5.75:0,6,82	0/1:11,0:15:7.40:7,0,217	0/0:33,0:36:29.81:0,30,598	./.	0/0:17,0:22:12.02:0,12,207	1/1:27,3:31:13.34:166,13,0	./.	0/0:22,0:26:18.04:0,18,329	0/0:12,0:22:27.08:0,27,511	0/0:20,0:19:9.02:0,9,124	0/0:10,0:16:15.05:0,15,298	1/1:17,0:18:2.70:19,3,0	1/1:16,12:29:14.78:213,15,0	0/1:11,8:20:38.11:174,0,38	1/1:18,0:18:2.84:14,3,0	./.	1/1:56,17:71:12.01:161,12,0	0/0:11,0:11:8.96:0,9,131	0/0:17,0:17:14.78:0,15,257	0/0:23,0:33:17.85:0,18,284	0/1:13,2:16:62.65:63,0,310	1/1:12,4:16:10.93:114,11,0	1/1:7,7:15:18.05:259,18,0	1/1:5,2:8:12.03:148,12,0
chr10	109651247	.	AT	A	18610.49	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=12.892;DP=616;FS=0.000;HRun=1;HaplotypeScore=106.4953;InbreedingCoeff=0.9947;MQ=83.20;MQ0=0;MQRankSum=-5.361;QD=37.00;ReadPosRankSum=3.736;VQSLOD=4.8083;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:99:1285,99,0	0/0:10,0:10:30.10:0,30,476	0/0:18,1:19:54.16:0,54,835	0/0:19,0:19:47.21:0,47,848	1/1:0,18:18:54.18:701,54,0	1/1:0,25:25:75.24:974,75,0	1/1:0,25:25:72.23:932,72,0	1/1:1,36:37:99:1367,108,0	1/1:0,33:33:96.31:1249,96,0	0/0:29,0:29:87.30:0,87,1391	0/0:5,0:5:15.05:0,15,238	1/1:0,26:26:69.22:896,69,0	1/1:0,19:19:51.17:662,51,0	1/1:1,30:31:81.14:1050,81,0	1/1:0,36:36:99:1363,105,0	0/0:31,0:31:93.32:0,93,1487	1/1:0,27:27:69.22:896,69,0	1/1:0,18:18:54.18:701,54,0	1/1:0,10:10:30.07:360,30,0	1/1:0,15:15:45.15:584,45,0	1/1:0,23:23:66.21:857,66,0	1/1:0,18:18:51.17:662,51,0	1/1:0,9:9:27.09:350,27,0	1/1:0,31:31:90.29:1169,90,0	1/1:1,6:7:21.07:272,21,0	1/1:2,26:28:81.23:1034,81,0	1/1:0,25:25:75.24:974,75,0	1/1:0,7:7:21.07:273,21,0
chr10	109651947	.	GGGTGA	G	5606.91	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=2.001;DP=378;FS=6.392;HRun=0;HaplotypeScore=88.8567;InbreedingCoeff=0.3052;MQ=73.16;MQ0=0;MQRankSum=-4.665;QD=18.15;ReadPosRankSum=3.343;VQSLOD=3.9363;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:36.15:36,0,54	0/0:4,0:4:9.03:0,9,245	0/0:15,0:12:29.88:0,30,645	0/0:16,0:13:31.35:0,31,609	1/1:7,0:7:3.30:39,3,0	1/1:6,0:6:0.11:31,0,0	1/1:20,0:20:8.83:44,9,0	1/1:19,0:19:35.51:450,36,0	1/1:5,0:5:5.09:19,5,0	0/0:10,0:10:24.08:0,24,646	0/0:6,0:6:18.02:0,18,419	1/1:0,29:29:69.24:1428,69,0	1/1:0,10:10:15.52:313,16,0	1/1:0,14:14:24.06:500,24,0	1/1:1,14:15:30.10:625,30,0	0/0:18,0:18:51.17:0,51,1313	0/1:25,0:25:21.72:32,0,22	0/1:20,0:20:16.43:16,0,22	0/1:12,0:12:57.45:122,0,57	0/1:4,0:4:0.81:1,0,2	1/1:16,0:16:4.54:70,5,0	1/1:1,8:9:24.01:432,24,0	1/1:0,6:6:6.02:124,6,0	1/1:1,21:22:42.10:806,42,0	1/1:9,0:9:6.52:121,7,0	0/1:12,0:12:91.29:91,0,109	0/1:14,0:14:32.11:252,0,32	0/1:15,0:15:9.22:55,0,9
chr10	109651949	.	GTGA	G	5665.36	PASS	AB=0.556;AC=43;AF=0.768;AN=56;BaseQRankSum=6.046;DP=349;FS=2.983;HRun=0;HaplotypeScore=73.9818;InbreedingCoeff=0.7882;MQ=75.67;MQ0=0;MQRankSum=-7.407;QD=20.16;ReadPosRankSum=1.847;VQSLOD=4.4935;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,1:15:7.05:78,7,0	0/0:3,0:3:9.03:0,9,198	0/0:13,0:12:27.09:0,27,508	0/0:15,0:13:28.30:0,28,502	1/1:0,6:6:12.02:135,12,0	1/1:3,2:6:14.98:198,15,0	1/1:2,13:18:18.05:247,18,0	1/1:8,5:16:45.15:657,45,0	1/1:0,4:4:6.02:111,6,0	0/0:11,0:11:27.08:0,27,497	0/0:7,0:7:17.96:0,18,306	1/1:29,0:29:68.74:717,69,0	1/1:10,0:10:15.03:154,15,0	1/1:14,0:14:24.05:245,24,0	1/1:15,0:15:30.07:311,30,0	0/0:18,0:18:51.17:0,51,964	1/1:1,16:23:18.03:187,18,0	1/1:1,1:18:24.07:331,24,0	1/1:5,2:9:21.07:294,21,0	1/1:1,0:3:6.02:82,6,0	1/1:2,14:18:11.96:148,12,0	1/1:9,0:9:23.99:241,24,0	1/1:6,0:6:6.01:60,6,0	1/1:22,0:22:42.06:427,42,0	1/1:6,0:8:15.02:182,15,0	0/1:2,4:10:56.89:306,0,57	1/1:8,1:12:32.30:424,32,0	1/1:0,7:10:12.03:132,12,0
chr10	109651951	.	GA	G	2485.32	PASS	AB=0.714;AC=43;AF=0.768;AN=56;BaseQRankSum=8.040;DP=354;FS=0.601;HRun=2;HaplotypeScore=77.5477;InbreedingCoeff=0.7906;MQ=75.47;MQ0=0;MQRankSum=-6.753;QD=8.69;ReadPosRankSum=1.682;VQSLOD=1.2363;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,2:17:15.54:124,16,0	0/0:3,0:3:9.03:0,9,135	0/0:14,0:12:30.10:0,30,425	0/0:15,0:13:29.45:0,29,400	1/1:6,0:6:10.66:61,11,0	1/1:7,1:8:16.15:128,16,0	1/1:15,1:18:17.71:133,18,0	1/1:13,2:16:44.55:315,45,0	1/1:4,0:4:5.72:29,6,0	0/0:10,0:10:27.09:0,27,399	0/0:8,0:8:18.02:0,18,244	1/1:29,0:29:59.66:236,60,0	1/1:10,0:10:13.06:52,13,0	1/1:14,0:14:20.77:80,21,0	1/1:15,0:15:25.96:101,26,0	0/0:18,0:18:51.16:0,51,732	1/1:16,6:22:17.83:130,18,0	1/1:12,4:19:23.16:153,23,0	1/1:8,1:10:14.70:174,15,0	1/1:1,2:3:6:55,6,0	1/1:14,2:18:12.24:77,12,0	1/1:9,0:9:17.78:81,18,0	1/1:6,0:6:5.57:31,6,0	1/1:22,0:22:36.95:157,37,0	1/1:6,2:8:14.52:97,15,0	0/1:6,4:10:53.80:148,0,54	1/1:9,2:12:32.31:242,32,0	1/1:9,1:10:11.49:72,11,0
chr10	109652384	.	T	TCTTTC	5535.77	PASS	AB=0.967;AC=26;AF=0.464;AN=56;BaseQRankSum=-2.719;DP=492;FS=13.210;HRun=0;HaplotypeScore=107.6136;InbreedingCoeff=0.4895;MQ=54.29;MQ0=18;MQRankSum=-1.352;QD=22.97;ReadPosRankSum=2.572;VQSLOD=3.7308;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,1:26:43.43:838,43,0	0/0:9,0:9:23.94:0,24,322	0/0:68,0:17:31.39:0,31,383	0/0:56,0:9:7.79:0,8,133	1/1:9,0:9:13.70:238,14,0	1/1:14,0:14:27.08:398,27,0	0/1:24,0:24:41.75:299,0,42	1/1:15,0:15:5.30:259,5,0	0/1:11,0:12:36.88:188,0,37	0/0:15,0:15:42.08:0,42,735	0/0:14,0:14:36.10:0,36,669	0/0:14,0:14:8.21:0,8,277	0/0:12,0:12:6.02:0,6,101	0/0:24,0:24:12.91:0,13,126	0/0:9,0:9:12.04:0,12,155	0/0:8,0:8:21.03:0,21,397	1/1:34,1:34:23.34:567,23,0	0/1:17,1:18:48.91:277,0,49	0/1:15,0:14:41.99:359,0,42	1/1:3,0:4:9.82:104,10,0	1/1:13,0:13:4.18:365,4,0	0/0:5,0:5:9.02:0,9,106	0/1:6,0:6:8.59:9,0,41	0/0:17,0:17:38.82:0,39,343	1/1:14,0:14:15.39:486,15,0	0/1:12,1:13:7.40:462,0,7	1/1:15,0:16:35.55:398,36,0	1/1:7,0:7:21.05:287,21,0
chr10	109652388	.	TTTTG	T	2631.52	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=-2.836;DP=495;FS=5.048;HRun=0;HaplotypeScore=109.3365;InbreedingCoeff=0.0528;MQ=55.64;MQ0=18;MQRankSum=-1.395;QD=6.96;ReadPosRankSum=-7.515;VQSLOD=-0.4296;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:16.61:294,17,0	0/0:9,0:9:20.98:0,21,282	0/0:70,0:18:7.31:0,7,322	0/1:55,0:11:3.30:3,0,91	1/1:12,0:12:11.02:142,11,0	0/1:14,0:14:10.87:106,0,11	0/1:24,0:24:25.22:217,0,25	0/1:14,0:14:13.55:56,0,14	0/1:12,0:12:73.02:83,0,73	0/0:14,0:14:35.56:0,36,619	0/0:15,0:15:24.81:0,25,542	1/1:12,1:13:27.51:319,28,0	1/1:1,11:12:6.02:100,6,0	1/1:2,21:23:9.50:151,10,0	1/1:9,0:9:6.96:86,7,0	0/0:8,0:8:20.10:0,20,366	0/1:34,0:33:99:144,0,107	0/1:16,0:16:36.14:104,0,36	0/1:13,0:12:5.32:120,0,5	0/1:6,0:6:19.99:47,0,20	1/1:14,0:14:12.69:91,13,0	1/1:4,0:4:5.51:51,6,0	0/1:7,0:7:0.23:1,0,0	1/1:16,0:16:36.59:303,37,0	0/1:15,0:15:21.25:187,0,21	0/1:15,0:15:16.15:153,0,16	0/1:15,0:15:43.36:43,0,59	0/1:6,0:6:0.91:1,0,1
chr10	109652391	.	TG	T	5046.04	PASS	AB=0.930;AC=46;AF=0.821;AN=56;BaseQRankSum=4.857;DP=480;FS=6.827;HRun=1;HaplotypeScore=82.4313;InbreedingCoeff=0.6819;MQ=54.89;MQ0=16;MQRankSum=-4.042;QD=11.55;ReadPosRankSum=-1.829;VQSLOD=2.2195;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,2:28:67.16:467,67,0	0/0:9,0:9:20.65:0,21,160	0/1:61,4:16:4.74:5,0,207	0/1:50,5:11:8.27:8,0,60	1/1:12,0:12:32.70:256,33,0	1/1:14,0:14:40.92:303,41,0	1/1:21,3:24:66.57:453,67,0	1/1:9,5:14:29.91:272,30,0	1/1:10,2:12:28.87:185,29,0	0/0:12,0:12:35.86:0,36,324	0/0:14,0:14:24.37:0,24,285	1/1:12,0:12:26.95:226,27,0	1/1:11,1:12:5.98:47,6,0	1/1:22,1:23:11.92:89,12,0	1/1:7,0:7:5.97:45,6,0	0/0:8,0:8:19.45:0,19,176	1/1:29,5:33:76.18:558,76,0	1/1:15,3:18:49.23:370,49,0	1/1:13,0:13:35.39:273,35,0	1/1:6,0:6:17.30:128,17,0	1/1:12,0:12:17.90:138,18,0	1/1:4,0:4:5.58:33,6,0	1/1:7,0:7:0.12:1,0,0	1/1:16,0:16:37.38:222,37,0	1/1:15,1:16:46.70:340,47,0	1/1:14,2:16:46.91:349,47,0	1/1:14,1:15:31.48:246,31,0	1/1:0,1:1:3.01:31,3,0
chr10	109654936	.	C	CT	1149.78	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=-6.610;DP=405;FS=17.183;HRun=7;HaplotypeScore=64.9015;InbreedingCoeff=0.8557;MQ=78.49;MQ0=3;MQRankSum=1.265;QD=15.13;ReadPosRankSum=0.169;VQSLOD=2.0192;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:20:55.34:0,55,502	0/0:10,0:10:27.04:0,27,260	0/0:22,0:11:16.61:0,17,131	0/1:17,0:12:11.68:12,0,42	0/0:11,0:12:26.72:0,27,226	0/0:15,0:15:41.81:0,42,371	0/0:10,0:10:24.49:0,24,223	0/0:35,0:35:73.68:0,74,688	0/0:9,0:9:24.04:0,24,230	0/0:16,0:16:42.06:0,42,402	0/0:9,0:9:24:0,24,215	1/1:4,3:7:13.39:158,13,0	1/1:1,13:14:12.04:144,12,0	1/1:0,8:8:21.06:253,21,0	1/1:1,12:13:30.09:362,30,0	0/0:16,0:16:42.01:0,42,384	0/0:26,0:26:65.27:0,65,562	0/0:26,0:25:62.46:0,62,550	0/0:19,0:19:43.63:0,44,332	0/0:11,0:11:32.54:0,33,274	0/0:8,0:8:20.57:0,21,169	0/1:1,0:1:0:0,0,0	1/1:2,5:7:11.93:124,12,0	1/1:1,8:9:24.07:280,24,0	0/0:16,0:16:38.79:0,39,353	0/0:18,0:18:53.44:0,53,470	0/0:20,0:23:59.98:0,60,515	0/0:7,0:7:20.87:0,21,186
chr10	109655410	.	T	TC	168.44	PASS	AB=0.929;AC=9;AF=0.161;AN=56;BaseQRankSum=2.603;DP=411;FS=2.358;HRun=2;HaplotypeScore=66.0731;InbreedingCoeff=0.7023;MQ=71.26;MQ0=1;MQRankSum=-1.468;QD=2.96;ReadPosRankSum=-1.029;VQSLOD=-0.4596;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:81.22:0,81,1010	0/0:6,0:6:15.05:0,15,203	0/0:20,0:13:33.35:0,33,347	0/0:11,0:9:14.58:0,15,135	0/1:12,1:13:12.48:12,0,25	1/1:9,1:10:3.29:81,3,0	1/1:6,13:19:4.28:56,4,0	0/0:21,0:21:57.17:0,57,756	1/1:1,6:7:7.24:56,7,0	0/0:15,0:15:45.14:0,45,599	0/0:5,0:5:15.05:0,15,208	0/0:13,0:13:39.13:0,39,541	0/0:8,0:8:21.06:0,21,272	0/0:19,0:19:54.18:0,54,742	0/0:8,0:8:24.08:0,24,335	0/0:11,0:11:30.09:0,30,403	0/0:29,0:29:77.59:0,78,947	0/0:29,0:29:75.19:0,75,926	0/0:19,0:19:35.98:0,36,642	0/0:7,0:7:18.36:0,18,206	0/0:32,0:32:90.28:0,90,1149	0/0:6,0:6:18.06:0,18,246	0/0:10,0:10:30.10:0,30,416	0/0:25,0:25:72.12:0,72,981	1/1:8,0:8:9.51:100,10,0	0/0:14,0:14:33.03:0,33,384	0/0:11,0:11:30.09:0,30,379	0/0:3,0:2:6.02:0,6,81
chr10	109655411	.	TC	T	3671.37	PASS	AB=0.875;AC=21;AF=0.375;AN=56;BaseQRankSum=2.378;DP=405;FS=2.560;HRun=10;HaplotypeScore=51.7729;InbreedingCoeff=0.8282;MQ=71.32;MQ0=1;MQRankSum=0.009;QD=18.54;ReadPosRankSum=0.756;VQSLOD=4.2749;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,22:29:56.97:494,57,0	0/0:6,0:6:12.03:0,12,133	0/0:19,1:13:4.28:0,4,164	0/0:11,0:10:4.78:0,5,58	0/0:13,0:13:20.78:0,21,150	0/0:11,0:11:14.51:0,15,87	0/0:19,0:19:8.74:0,9,53	1/1:6,14:20:35.80:294,36,0	0/0:7,0:7:8.69:0,9,50	0/0:15,0:15:11.88:0,12,341	0/0:5,0:5:15.03:0,15,157	0/0:13,0:13:39.09:0,39,423	0/1:6,1:7:8:8,0,148	0/0:18,1:19:22.07:0,22,464	0/0:8,0:8:21.06:0,21,232	0/0:10,0:10:27.07:0,27,299	1/1:5,23:28:62.98:544,63,0	1/1:4,25:29:65.98:572,66,0	1/1:5,13:19:40.89:326,41,0	1/1:1,6:7:17.89:146,18,0	1/1:4,28:32:80.97:702,81,0	0/0:6,0:6:15.02:0,15,151	0/0:10,0:10:30.07:0,30,324	0/0:25,0:25:63.10:0,63,672	0/0:8,0:8:11.56:0,12,73	1/1:1,12:13:35.92:299,36,0	1/1:0,11:11:29.99:260,30,0	1/1:1,2:3:3:26,3,0
chr10	109658022	.	T	TG	3150.15	PASS	AC=18;AF=0.360;AN=50;BaseQRankSum=-6.440;DP=335;FS=5.883;HRun=8;HaplotypeScore=44.1513;InbreedingCoeff=0.8236;MQ=85.29;MQ0=1;MQRankSum=-2.454;QD=21.88;ReadPosRankSum=2.317;VQSLOD=3.7246;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:39.59:450,40,0	0/0:4,0:4:6:0,6,55	0/0:19,0:20:41.16:0,41,344	0/0:13,0:13:15.16:0,15,197	./.	0/0:21,0:21:51.02:0,51,466	0/0:17,0:17:32.98:0,33,297	1/1:2,7:9:18.05:208,18,0	0/0:11,0:11:21:0,21,192	0/0:5,0:5:2.99:0,3,27	0/0:6,0:6:6.46:0,6,55	0/0:16,0:16:26.97:0,27,246	0/0:8,0:8:5.99:0,6,55	0/0:13,0:13:23.99:0,24,219	0/0:12,0:12:14.98:0,15,137	0/0:9,0:9:18:0,18,165	1/1:3,27:30:72.21:830,72,0	1/1:1,21:22:60.18:692,60,0	1/1:7,6:13:26.93:269,27,0	./.	1/1:4,31:35:60.13:692,60,0	./.	0/0:6,0:6:2.99:0,3,27	0/0:20,0:20:38.99:0,39,357	0/0:6,0:6:11.99:0,12,106	1/1:2,4:6:9.03:104,9,0	1/1:0,6:6:6.01:69,6,0	1/1:4,0:4:2.99:24,3,0
chr10	109660237	.	C	CT	16027.60	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-11.283;DP=589;FS=0.401;HRun=5;HaplotypeScore=55.5380;InbreedingCoeff=0.9975;MQ=73.29;MQ0=2;MQRankSum=-1.709;QD=34.84;ReadPosRankSum=4.145;VQSLOD=4.7379;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:84.28:1149,84,0	0/0:10,0:10:30.05:0,30,321	0/0:28,0:23:44.19:0,44,534	0/0:25,0:16:34.82:0,35,342	1/1:0,19:19:48.16:650,48,0	1/1:1,22:23:63.21:862,63,0	1/1:1,16:17:45.15:616,45,0	1/1:4,22:26:58.44:781,58,0	1/1:1,14:15:39.13:533,39,0	0/0:21,0:21:57.16:0,57,640	0/0:17,0:17:48.14:0,48,544	1/1:1,22:23:51.17:698,51,0	1/1:0,15:15:36.12:492,36,0	1/1:1,29:30:81.27:1108,81,0	1/1:1,21:22:60.20:820,60,0	0/0:27,0:27:81.23:0,81,918	1/1:3,30:33:72.24:985,72,0	1/1:1,40:41:99:1560,114,0	1/1:2,14:16:42.10:526,42,0	1/1:0,16:16:39.13:528,39,0	1/1:0,18:18:42.14:574,42,0	1/1:1,11:12:30.10:407,30,0	1/1:1,15:16:42.14:574,42,0	1/1:0,23:23:69.23:944,69,0	1/1:1,17:18:48.16:657,48,0	1/1:2,19:21:22.82:703,23,0	1/1:0,18:18:45.15:615,45,0	1/1:0,8:8:18.06:246,18,0
chr10	109661792	.	AT	A	1829.80	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.362;DP=541;FS=3.300;HRun=10;HaplotypeScore=54.2469;InbreedingCoeff=0.9838;MQ=72.34;MQ0=1;MQRankSum=0.192;QD=18.86;ReadPosRankSum=3.521;VQSLOD=4.5709;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:95.89:0,96,1016	0/0:7,0:8:17.92:0,18,180	0/0:26,0:21:10.23:0,10,287	0/0:10,0:9:21.06:0,21,230	1/1:4,17:21:47.98:416,48,0	1/1:4,16:20:47.99:417,48,0	1/1:1,19:20:44.99:391,45,0	0/0:30,1:33:60.52:0,61,829	1/1:2,13:15:29.98:260,30,0	0/0:22,0:22:60.15:0,60,657	0/0:10,0:10:27.07:0,27,299	0/0:20,0:20:54.15:0,54,597	0/0:10,0:10:27.07:0,27,299	0/0:26,0:26:72.16:0,72,784	0/0:24,0:24:66.18:0,66,730	0/0:18,1:19:25.10:0,25,505	0/0:25,1:26:20.23:0,20,678	0/0:22,0:22:40.16:0,40,668	0/0:18,0:18:50.95:0,51,534	0/0:14,0:14:33.05:0,33,349	0/0:9,0:9:24.06:0,24,265	0/0:18,0:18:42.11:0,42,457	0/0:9,0:9:27.07:0,27,299	0/0:20,0:20:50.89:0,51,530	1/1:1,20:21:59.99:521,60,0	0/0:24,0:24:69.18:0,69,757	0/0:24,0:24:57.15:0,57,626	0/0:13,0:13:36.10:0,36,397
chr10	109661864	.	AACACAC	A	1766.98	PASS	AB=0.867;AC=18;AF=0.346;AN=52;BaseQRankSum=1.929;DP=428;FS=1.531;HRun=0;HaplotypeScore=91.0393;InbreedingCoeff=0.5263;MQ=64.68;MQ0=7;MQRankSum=-3.432;QD=9.20;ReadPosRankSum=0.278;VQSLOD=1.9929;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,12:35:8.10:289,8,0	0/0:4,0:3:6.01:0,6,122	./.	./.	0/0:8,0:8:8.97:0,9,79	0/0:3,0:12:20.15:0,20,234	0/1:4,1:17:44.07:44,0,173	0/1:20,0:18:35.16:35,0,75	0/0:15,0:15:29.44:0,29,641	0/0:14,0:14:17.20:0,17,418	0/0:12,0:12:15.03:0,15,304	0/0:5,0:14:15.01:0,15,387	0/0:8,0:9:12.78:0,13,147	0/0:7,0:13:9.02:0,9,172	0/0:8,0:17:6.02:0,6,157	0/0:11,0:18:30.52:0,31,727	1/1:11,8:19:12.04:237,12,0	1/1:9,4:14:8.91:164,9,0	1/1:13,6:19:9.63:196,10,0	0/1:8,0:9:0.95:56,0,1	0/1:20,0:19:16.17:48,0,16	0/0:7,0:10:3.01:0,3,79	0/0:5,0:8:2.04:0,2,6	0/0:12,0:23:24.04:0,24,554	0/0:6,0:8:10.96:0,11,186	1/1:4,7:11:15.62:289,16,0	1/1:13,4:17:21.03:359,21,0	1/1:6,2:11:3.81:226,4,0
chr10	109662114	.	AC	A	5061.65	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=6.778;DP=455;FS=3.335;HRun=6;HaplotypeScore=56.6061;InbreedingCoeff=0.9502;MQ=87.45;MQ0=0;MQRankSum=-2.306;QD=25.44;ReadPosRankSum=2.313;VQSLOD=4.9736;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:69.17:741,69,0	0/0:3,0:3:6.02:0,6,75	0/0:22,0:21:31.35:0,31,492	0/0:24,0:23:35.82:0,36,385	0/0:7,0:7:21.07:0,21,275	0/0:12,0:12:30.10:0,30,394	0/0:21,0:21:54.16:0,54,696	1/1:6,15:21:42.10:446,42,0	0/0:11,0:11:33.08:0,33,405	0/0:14,0:14:39.13:0,39,513	0/0:6,0:6:18.06:0,18,237	0/0:15,0:15:42.13:0,42,538	0/0:16,0:16:48.16:0,48,631	0/0:21,0:21:57.16:0,57,709	0/0:13,0:13:33.10:0,33,420	0/0:22,0:22:51.17:0,51,671	1/1:4,22:26:26.71:637,27,0	1/1:1,20:21:57.14:612,57,0	1/1:4,16:20:48.12:515,48,0	1/1:0,5:5:11.61:127,12,0	1/1:3,39:42:99:1096,102,0	0/0:3,0:3:9.03:0,9,116	0/0:9,0:9:24.08:0,24,316	0/0:23,0:23:60.19:0,60,784	0/0:13,0:13:39.13:0,39,511	1/1:2,14:16:5.63:410,6,0	1/1:2,8:10:18.04:188,18,0	1/1:3,10:13:27.07:290,27,0
chr10	109662456	.	T	TA	1772.74	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-1.936;DP=377;FS=11.305;HRun=8;HaplotypeScore=50.6497;InbreedingCoeff=0.9344;MQ=82.76;MQ0=0;MQRankSum=-3.327;QD=23.64;ReadPosRankSum=1.068;VQSLOD=3.5684;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:39.02:0,39,357	0/0:8,0:8:24.01:0,24,220	0/0:23,0:18:19.96:0,20,168	0/0:14,0:12:10.93:0,11,171	0/0:11,0:11:33.02:0,33,302	0/0:15,0:15:36.02:0,36,329	0/0:13,0:13:24.01:0,24,220	0/0:27,0:27:63.02:0,63,575	0/0:15,0:15:30.02:0,30,275	0/0:15,0:15:39.02:0,39,357	0/0:8,0:8:15:0,15,137	1/1:2,19:21:51.15:588,51,0	1/1:1,8:9:21.06:242,21,0	1/1:3,6:9:12.04:138,12,0	1/1:4,18:22:48.13:546,48,0	0/0:14,0:14:39.01:0,39,357	0/0:27,0:27:60:0,60,542	0/0:13,0:13:33.01:0,33,302	0/0:12,0:12:33:0,33,295	0/0:10,0:10:20.99:0,21,192	0/0:2,0:2:6:0,6,55	1/1:0,2:2:6.02:69,6,0	1/1:3,4:7:21.06:241,21,0	1/1:0,5:5:12.04:138,12,0	0/0:19,0:19:32.99:0,33,298	0/0:16,0:16:33.01:0,33,302	0/0:9,0:9:18.01:0,18,165	0/0:13,0:13:23.93:0,24,209
chr10	109662509	.	GT	G	1751.30	PASS	AB=0.764;AC=40;AF=0.714;AN=56;BaseQRankSum=3.316;DP=402;FS=2.904;HRun=14;HaplotypeScore=63.6276;InbreedingCoeff=0.3574;MQ=70.75;MQ0=3;MQRankSum=0.022;QD=5.34;ReadPosRankSum=3.480;VQSLOD=2.3461;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:5,14:19:19.95:169,0,20	0/1:4,1:5:10.34:10,0,44	0/0:21,0:7:7.97:0,8,48	0/0:13,1:10:11.54:0,12,73	1/1:1,0:9:8.12:24,8,0	1/1:2,0:9:11.99:35,12,0	1/1:4,0:14:14.22:42,14,0	1/1:17,18:35:6.46:314,6,0	1/1:7,0:18:21.66:61,22,0	0/0:12,1:14:6.16:0,6,176	0/0:7,0:9:17.85:0,18,150	1/1:11,0:18:18.20:50,18,0	1/1:6,0:10:12.35:33,12,0	1/1:12,0:14:6.11:29,6,0	1/1:13,0:22:23.27:67,23,0	0/0:14,1:16:8.52:0,9,197	0/1:11,8:19:70.50:117,0,71	0/1:10,1:12:28.39:82,0,28	1/1:6,7:15:24.61:148,25,0	1/1:3,6:9:14.77:102,15,0	1/1:0,4:4:8.93:62,9,0	1/1:3,0:5:3.22:8,3,0	1/1:5,1:16:26.48:102,26,0	1/1:6,0:8:7.90:23,8,0	1/1:0,0:18:22.58:67,23,0	0/1:6,9:16:35.61:116,0,36	0/1:6,0:6:10.20:10,0,22	1/1:7,17:26:29.07:258,29,0
chr10	109662522	.	TTG	T	809.76	PASS	AB=0.902;AC=13;AF=0.232;AN=56;BaseQRankSum=4.421;DP=387;FS=29.986;HRun=0;HaplotypeScore=70.0370;InbreedingCoeff=0.0551;MQ=72.38;MQ0=3;MQRankSum=-1.182;QD=5.74;ReadPosRankSum=3.092;VQSLOD=1.3906;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:43.32:0,43,326	0/0:5,0:5:11.94:0,12,135	0/0:20,0:5:14.26:0,14,95	0/1:17,0:13:7.28:7,0,98	0/0:9,0:9:16.37:0,16,82	0/0:8,0:8:13.91:0,14,62	0/0:13,0:13:18.88:0,19,120	0/0:33,0:32:76.94:0,77,594	0/1:17,2:19:82.01:85,0,82	0/0:14,0:14:35.75:0,36,391	0/0:9,0:9:24.06:0,24,316	0/1:12,2:14:16.46:158,0,16	0/1:7,3:10:14.01:180,0,14	0/1:12,3:15:81.53:181,0,82	1/1:12,4:16:20.04:192,20,0	0/0:13,0:13:30.68:0,31,346	0/0:18,1:19:0.92:0,1,263	0/1:12,0:12:13.73:14,0,54	0/0:14,0:14:4.38:0,4,132	0/0:7,0:7:14.60:0,15,84	0/0:4,0:4:8.77:0,9,51	1/1:2,2:4:5.61:46,6,0	0/1:16,2:18:57.83:58,0,64	0/1:8,2:10:40.40:40,0,52	0/0:19,0:19:17.59:0,18,111	0/0:18,0:18:27.77:0,28,285	0/1:6,0:6:0.14:0,0,97	0/0:20,0:20:40.16:0,40,274
chr10	109663727	.	A	AC	3038.77	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-9.680;DP=577;FS=0.910;HRun=5;HaplotypeScore=55.3512;InbreedingCoeff=0.9946;MQ=80.01;MQ0=1;MQRankSum=-1.568;QD=32.33;ReadPosRankSum=0.861;VQSLOD=4.1608;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.16:0,84,882	0/0:8,0:8:18.04:0,18,193	0/0:21,0:21:44.61:0,45,475	0/0:19,0:17:30.47:0,30,360	1/1:0,14:15:42.09:533,42,0	1/1:1,24:25:63.20:827,63,0	1/1:4,17:21:51.17:671,51,0	0/0:30,0:30:71.62:0,72,772	1/1:0,16:16:45.15:592,45,0	0/0:20,0:20:54.14:0,54,580	0/0:17,0:17:51.13:0,51,547	0/0:34,0:34:93.23:0,93,999	0/0:28,0:28:84.21:0,84,902	0/0:13,0:13:30.07:0,30,321	0/0:30,0:30:81.20:0,81,869	0/0:19,0:19:54.14:0,54,580	0/0:31,0:31:90.21:0,90,958	0/0:19,0:19:54.14:0,54,579	0/0:21,0:21:57.14:0,57,611	0/0:11,0:11:27.05:0,27,282	0/0:41,0:40:99:0,111,1192	0/0:10,0:10:30.08:0,30,322	0/0:7,0:7:21.05:0,21,224	0/0:26,0:26:72.18:0,72,773	1/1:0,17:17:45.15:592,45,0	0/0:24,0:24:66.16:0,66,704	0/0:13,0:13:33.08:0,33,355	0/0:9,0:9:18.04:0,18,193
chr10	109664866	.	C	CAA	1821.76	PASS	AB=0.984;AC=15;AF=0.268;AN=56;BaseQRankSum=3.659;DP=599;FS=8.995;HRun=13;HaplotypeScore=104.2752;InbreedingCoeff=0.4669;MQ=74.10;MQ0=0;MQRankSum=-2.701;QD=8.89;ReadPosRankSum=-7.176;VQSLOD=-0.7236;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:35:39.19:0,39,469	0/0:13,0:15:26.26:0,26,208	0/0:18,0:15:5.69:0,6,40	0/1:15,0:12:28.86:29,0,38	1/1:10,10:23:48.18:451,48,0	1/1:1,12:15:24.08:323,24,0	1/1:7,13:22:6.01:69,6,0	0/0:24,0:27:53.11:0,53,487	1/1:19,5:26:61.61:711,62,0	0/0:30,0:30:6.36:0,6,352	0/0:10,0:11:10.83:0,11,86	0/0:31,0:32:14.19:0,14,278	0/1:19,0:22:6.98:7,0,130	0/1:22,0:22:5.12:5,0,254	0/0:17,0:18:26.41:0,26,223	0/0:22,0:23:0.97:0,1,124	0/0:25,0:27:50.43:0,50,429	0/0:27,0:31:58.92:0,59,483	0/0:11,0:13:1.01:0,1,85	0/0:12,0:13:17.46:0,17,137	0/0:28,0:29:17.64:0,18,366	0/0:11,0:12:23.69:0,24,193	0/1:8,0:10:5.76:6,0,85	0/0:37,0:39:43.79:0,44,579	1/1:3,15:23:17.36:389,17,0	0/1:23,0:26:3.40:3,0,197	0/0:13,0:14:20.45:0,20,163	0/0:6,0:6:5.03:0,5,51
chr10	109666098	.	A	ACACACACACACC	15104.46	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=2.197;DP=714;FS=2.317;HRun=0;HaplotypeScore=238.7486;InbreedingCoeff=0.8302;MQ=58.27;MQ0=20;MQRankSum=-7.484;QD=28.55;ReadPosRankSum=-1.055;VQSLOD=3.8666;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:30.30:381,30,0	0/0:11,0:11:30:0,30,538	0/0:48,0:20:32.85:0,33,383	0/0:46,0:27:43.52:0,44,784	1/1:6,7:24:14.45:157,14,0	1/1:7,15:27:18.77:1102,19,0	1/1:12,0:32:25.38:989,25,0	1/1:31,0:29:78.01:977,78,0	1/1:5,10:22:23.86:1456,24,0	0/0:28,0:27:68.46:0,68,1444	0/0:17,0:17:47.99:0,48,1158	1/1:30,0:30:71.74:926,72,0	1/1:25,0:25:47.74:839,48,0	1/1:27,0:27:41.88:399,42,0	1/1:33,0:31:56.81:700,57,0	0/0:33,0:33:93.17:0,93,2434	1/1:24,0:24:56.86:951,57,0	1/1:22,0:22:59.88:1071,60,0	1/1:25,0:25:71.19:1357,71,0	1/1:21,0:20:32.30:296,32,0	1/1:10,0:29:5.91:38,6,0	1/1:19,0:18:23.82:280,24,0	1/1:12,0:10:15.02:193,15,0	1/1:4,0:27:3.48:168,3,0	1/1:5,1:16:15.01:606,15,0	0/1:29,0:28:89.51:1364,0,90	1/1:24,0:22:18.96:726,19,0	1/1:3,0:3:8.95:127,9,0
chr10	109667326	.	TA	T	1309.85	PASS	AB=0.685;AC=26;AF=0.464;AN=56;BaseQRankSum=3.199;DP=565;FS=4.504;HRun=16;HaplotypeScore=75.9630;InbreedingCoeff=0.3733;MQ=71.10;MQ0=2;MQRankSum=-0.317;QD=3.77;ReadPosRankSum=5.709;VQSLOD=0.6399;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:11,13:24:42.57:95,0,43	0/0:8,1:10:2.77:0,3,114	0/0:18,0:9:7.95:0,8,68	0/0:21,1:15:8.82:0,9,58	0/0:12,1:30:48.94:0,49,289	0/0:12,1:30:26.80:0,27,254	0/0:7,0:21:25.88:0,26,150	0/1:25,3:28:75.79:83,0,76	0/0:6,0:10:11.67:0,12,79	0/0:19,0:20:20.46:0,20,229	0/0:21,1:23:9.27:0,9,245	1/1:2,0:15:20.36:58,20,0	1/1:10,0:23:18.79:62,19,0	1/1:6,0:17:20.77:61,21,0	1/1:5,0:20:22.29:64,22,0	0/0:18,0:19:34.51:0,35,288	1/1:13,8:22:7.97:124,8,0	0/1:25,12:37:99:202,0,134	0/1:9,10:20:6.21:132,0,6	0/1:9,13:23:34.89:110,0,35	0/1:12,10:22:16.86:69,0,17	1/1:1,1:9:11.02:41,11,0	1/1:4,0:10:8.05:23,8,0	1/1:5,0:19:29.28:92,29,0	0/0:13,0:15:29.99:0,30,187	1/1:8,7:16:5.48:99,5,0	0/1:5,13:18:1.46:87,0,1	0/1:9,12:24:91.16:101,0,91
chr10	109667971	.	A	ATG	1894.94	PASS	AB=0.610;AC=9;AF=0.161;AN=56;BaseQRankSum=-3.183;DP=781;FS=4.063;HRun=0;HaplotypeScore=100.5251;InbreedingCoeff=0.3460;MQ=59.05;MQ0=16;MQRankSum=-0.858;QD=10.24;ReadPosRankSum=2.057;VQSLOD=3.4877;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:47:99:0,109,1226	0/0:12,0:12:18.61:0,19,308	0/0:29,0:19:27.06:0,27,305	0/0:33,0:15:23.50:0,24,221	0/0:12,0:13:32.92:0,33,360	0/0:24,0:24:47.55:0,48,526	0/0:34,0:33:60.07:0,60,680	0/0:34,0:32:41.70:0,42,459	0/0:21,0:21:45.02:0,45,494	0/0:30,0:29:71.90:0,72,789	0/0:15,0:15:44.91:0,45,499	0/1:12,15:27:11.30:384,0,11	1/1:15,2:17:29.30:341,29,0	0/1:6,22:28:24.52:309,0,25	0/1:12,20:32:65.14:485,0,65	0/0:33,0:33:62.86:0,63,731	0/0:31,0:31:67.96:0,68,757	0/0:29,0:29:63.15:0,63,732	0/0:27,0:26:40.97:0,41,477	0/0:23,0:23:20.19:0,20,462	0/0:73,0:72:99:0,148,1664	0/1:9,13:22:56.70:94,0,57	0/1:8,15:22:49.78:183,0,50	1/1:15,21:34:17.59:252,18,0	0/0:15,0:15:27.55:0,28,324	0/0:36,0:36:67.97:0,68,829	0/0:22,0:22:34.04:0,34,420	0/0:15,0:15:33.10:0,33,394
chr10	109669160	.	G	GC	9237.06	PASS	AB=0.691;AC=34;AF=0.607;AN=56;BaseQRankSum=4.725;DP=685;FS=94.871;HRun=0;HaplotypeScore=255.0085;InbreedingCoeff=0.3006;MQ=50.44;MQ0=13;MQRankSum=-10.512;QD=16.58;ReadPosRankSum=4.696;VQSLOD=1.3371;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,9:22:3.73:202,0,4	0/0:14,0:14:30.08:0,30,399	0/0:27,0:15:45.15:0,45,617	0/0:30,0:15:45.05:0,45,574	1/1:8,18:26:20.45:306,20,0	1/1:15,6:20:11.42:247,11,0	1/1:19,21:37:20.72:669,21,0	0/1:24,15:39:99:609,0,246	1/1:9,8:17:18.46:283,18,0	0/0:18,0:18:48.62:0,49,648	0/0:14,0:14:36.10:0,36,481	0/1:16,19:33:1.40:617,0,1	1/1:5,12:17:24.01:540,24,0	1/1:15,23:36:44.86:884,45,0	1/1:20,16:37:20.96:744,21,0	0/0:25,0:25:56.83:0,57,766	0/1:10,11:21:39.92:335,0,40	0/1:14,7:21:99:279,0,163	0/1:9,7:14:20.80:312,0,21	1/1:11,12:23:19.17:304,19,0	1/1:11,18:26:23.31:362,23,0	1/1:9,16:24:34.70:502,35,0	0/1:6,7:13:17.28:245,0,17	1/1:14,5:16:6.01:72,6,0	1/1:13,15:28:24.66:454,25,0	0/1:19,15:34:99:594,0,204	0/1:12,10:22:42.66:466,0,43	0/1:6,5:10:2.28:211,0,2
chr10	109669163	.	T	TG	6291.42	PASS	AB=0.976;AC=31;AF=0.554;AN=56;BaseQRankSum=13.878;DP=685;FS=82.738;HRun=1;HaplotypeScore=169.8224;InbreedingCoeff=0.0543;MQ=48.05;MQ0=15;MQRankSum=-10.512;QD=11.34;ReadPosRankSum=5.994;VQSLOD=1.3908;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:23:11.23:142,11,0	0/0:13,0:13:28.33:0,28,350	0/0:26,0:14:42.12:0,42,513	0/0:29,0:14:39.12:0,39,495	0/1:24,1:25:0.10:214,0,0	1/1:20,0:19:14.32:149,14,0	1/1:38,0:35:34.07:440,34,0	0/1:41,0:40:99:432,0,561	1/1:17,0:17:16.42:184,16,0	0/0:21,0:21:55.41:0,55,663	0/0:15,0:15:39.11:0,39,484	0/1:35,0:33:12.37:465,0,12	1/1:17,0:17:7.69:376,8,0	0/1:34,3:35:13.50:605,0,14	1/1:36,2:37:5.63:462,6,0	0/0:26,0:26:57.10:0,57,711	0/1:20,1:21:99:222,0,120	0/1:24,0:23:99:207,0,286	0/1:17,0:14:89.02:240,0,89	0/1:24,1:25:19.87:185,0,20	0/1:27,0:24:10.79:273,0,11	1/1:26,0:25:29.05:349,29,0	0/1:13,0:13:4.74:178,0,5	1/1:19,0:16:2.95:19,3,0	1/1:25,1:26:5.91:284,6,0	0/1:33,1:34:99:419,0,460	0/1:20,2:22:99:346,0,104	0/1:9,0:8:33.10:101,0,33
chr10	109669164	.	GT	G	5999.02	PASS	AB=0.706;AC=27;AF=0.482;AN=56;BaseQRankSum=15.001;DP=669;FS=87.470;HRun=1;HaplotypeScore=154.5963;InbreedingCoeff=-0.2111;MQ=47.33;MQ0=15;MQRankSum=-10.523;QD=11.17;ReadPosRankSum=6.281;VQSLOD=1.3828;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,7:23:12.44:127,0,12	0/0:14,0:14:33.10:0,33,456	0/0:26,0:14:42.12:0,42,513	0/0:28,0:13:39.12:0,39,496	0/1:11,11:22:14.38:214,0,14	1/1:15,6:20:0.02:132,0,0	1/1:20,14:32:16.53:422,17,0	0/1:28,14:41:99:429,0,721	1/1:9,7:16:17.90:186,18,0	0/0:23,0:23:60.34:0,60,769	0/0:15,0:15:39.13:0,39,579	0/1:16,18:32:25.68:441,0,26	0/1:6,12:18:42.62:365,0,43	0/1:18,17:33:30.50:575,0,30	0/1:24,12:35:3.20:457,0,3	0/0:26,0:26:62.22:0,62,852	0/1:12,8:20:99:225,0,108	0/1:19,3:21:98.13:98,0,371	0/1:10,7:14:99:238,0,134	0/1:13,11:24:54.56:182,0,55	0/1:13,13:23:9.26:273,0,9	1/1:10,16:25:28.63:349,29,0	0/1:5,7:12:23.63:178,0,24	1/1:15,4:16:2.96:19,3,0	0/1:15,10:25:1.59:274,0,2	0/1:22,12:34:99:411,0,644	0/1:14,7:21:99:301,0,132	0/1:4,5:8:59.63:101,0,60
chr10	109669169	.	T	TTATTG	11496.39	PASS	AB=0.976;AC=25;AF=0.446;AN=56;BaseQRankSum=16.538;DP=667;FS=33.638;HRun=0;HaplotypeScore=331.1161;InbreedingCoeff=-0.3569;MQ=38.06;MQ0=16;MQRankSum=-11.052;QD=21.13;ReadPosRankSum=6.315;VQSLOD=3.1816;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:24:84.97:149,0,85	0/0:14,0:14:36.12:0,36,805	0/0:21,0:9:27.09:0,27,579	0/0:26,0:10:30.10:0,30,620	0/1:21,1:22:48.94:507,0,49	0/1:21,0:20:30.58:301,0,31	0/1:36,0:33:1.70:794,0,2	0/1:42,0:41:99:378,0,1454	1/1:16,0:16:20.61:503,21,0	0/0:23,0:22:61:0,61,1188	0/0:14,0:14:33.11:0,33,767	0/1:35,0:33:53.82:1243,0,54	0/1:18,0:18:87.60:790,0,88	0/1:32,1:33:99:1197,0,159	0/1:32,1:33:25.45:879,0,25	0/0:25,0:25:60.21:0,60,1338	0/1:19,0:20:99:442,0,283	0/1:25,0:24:93.44:93,0,723	0/1:17,0:14:99:528,0,268	0/1:24,1:25:99:451,0,111	0/1:26,0:24:99:427,0,112	1/1:25,0:24:28.64:640,29,0	0/1:12,0:12:50.58:157,0,51	1/1:19,0:16:6.02:126,6,0	0/1:23,1:24:55.77:557,0,56	0/1:35,1:36:99:582,0,1256	0/1:19,1:21:99:602,0,259	0/1:9,0:8:99:148,0,109
chr10	109669173	.	T	TACTGAGCTTCAGGCCCG	6557.87	PASS	AB=0.989;AC=18;AF=0.321;AN=56;BaseQRankSum=11.426;DP=456;FS=41.552;HRun=0;HaplotypeScore=284.0611;InbreedingCoeff=-0.3701;MQ=38.27;MQ0=17;MQRankSum=-9.468;QD=22.01;ReadPosRankSum=-3.775;VQSLOD=2.3051;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:19:99:206,0,465	0/0:14,0:14:36.11:0,36,1579	0/0:17,0:5:15.05:0,15,416	0/0:22,0:6:18.06:0,18,638	0/0:11,1:12:5.83:0,6,161	0/1:16,0:15:99:118,0,111	0/1:23,0:20:99:344,0,131	0/1:28,0:27:99:707,0,1615	1/1:9,0:9:7.61:98,8,0	0/0:21,0:20:57.65:0,58,2150	0/0:15,0:15:36.11:0,36,1715	0/1:17,0:15:99:116,0,257	0/0:6,0:6:2.74:0,3,273	0/1:18,1:17:99:1062,0,122	0/1:22,0:21:99:404,0,129	0/0:26,0:26:63.21:0,63,2796	0/1:15,0:15:99:613,0,135	0/1:22,0:21:99:183,0,1052	0/1:11,0:8:99:199,0,181	0/1:14,1:15:82.44:82,0,316	0/0:14,0:11:11.44:0,11,396	0/1:10,0:9:14.89:74,0,15	0/0:6,0:6:5.93:0,6,170	0/1:17,0:14:18.72:19,0,156	0/1:15,0:15:99:302,0,205	0/1:25,0:25:99:1016,0,1718	0/1:13,1:14:99:1014,0,340	0/0:5,0:3:6.02:0,6,234
chr10	109671357	.	T	TCC	12851.06	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-8.616;DP=394;FS=0.000;HRun=3;HaplotypeScore=49.9479;InbreedingCoeff=0.8898;MQ=79.01;MQ0=1;MQRankSum=-2.792;QD=40.67;ReadPosRankSum=3.482;VQSLOD=4.3376;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,16:20:33.11:604,33,0	0/0:7,0:7:20.07:0,20,237	0/0:19,0:16:48.14:0,48,616	0/0:13,0:13:29.35:0,29,349	1/1:0,1:3:3.01:55,3,0	1/1:1,6:7:18.06:330,18,0	1/1:8,14:22:33.49:707,33,0	1/1:4,23:27:60.14:999,60,0	1/1:0,16:16:45.15:822,45,0	0/0:16,0:16:42.13:0,42,574	0/0:3,0:3:6.02:0,6,84	1/1:0,16:15:39.13:709,39,0	1/1:0,8:8:18.06:330,18,0	1/1:0,15:15:45.15:823,45,0	1/1:0,20:20:54.19:990,54,0	0/0:20,0:20:54.18:0,54,756	1/1:2,15:17:42.14:770,42,0	1/1:4,8:12:18.06:330,18,0	1/1:0,9:10:24.08:431,24,0	1/1:1,3:4:6.02:109,6,0	1/1:5,37:42:96.29:1725,96,0	1/1:3,2:5:4.45:107,4,0	1/1:0,9:9:20.64:384,21,0	1/1:1,14:15:39.13:715,39,0	1/1:0,13:13:30.10:550,30,0	1/1:0,11:11:30.03:481,30,0	1/1:0,11:10:27.09:494,27,0	1/1:0,8:8:21.07:385,21,0
chr10	109671448	.	T	TC	207.08	PASS	AB=0.810;AC=10;AF=0.208;AN=48;BaseQRankSum=4.372;DP=134;FS=4.694;HRun=4;HaplotypeScore=25.3102;InbreedingCoeff=0.1513;MQ=56.32;MQ0=10;MQRankSum=-4.470;QD=7.67;ReadPosRankSum=0.936;VQSLOD=0.1939;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:7:9.02:0,9,102	0/0:3,0:2:6.02:0,6,68	0/0:10,0:2:3.01:0,3,34	0/0:8,0:2:3.89:0,4,35	./.	./.	0/0:2,0:2:3.01:0,3,34	0/0:8,0:6:12.03:0,12,133	1/1:0,3:3:8.96:100,9,0	0/0:4,0:4:12.03:0,12,136	0/0:4,0:3:3.01:0,3,34	0/1:5,1:6:25.49:25,0,66	0/1:2,2:4:24.98:73,0,25	0/0:2,0:2:3.01:0,3,34	0/0:3,0:3:1.82:0,2,5	0/0:7,0:7:15.04:0,15,170	0/0:1,0:1:3.01:0,3,34	0/1:5,1:6:28.91:29,0,86	./.	0/0:6,1:5:4.83:0,5,39	0/0:24,0:19:42.12:0,42,471	0/0:1,0:1:0.47:0,0,1	1/1:0,1:1:3.01:38,3,0	./.	1/1:0,1:1:3.01:41,3,0	0/0:7,0:6:15.04:0,15,169	0/1:5,1:6:28.90:29,0,90	0/0:4,0:4:9.02:0,9,102
chr10	109671449	.	CCCCT	C	139.64	PASS	AB=0.830;AC=6;AF=0.125;AN=48;BaseQRankSum=2.441;DP=136;FS=0.000;HRun=0;HaplotypeScore=31.8952;InbreedingCoeff=-0.0430;MQ=56.20;MQ0=9;MQRankSum=-1.392;QD=6.07;ReadPosRankSum=-2.343;VQSLOD=0.9701;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:7:9.03:0,9,237	0/0:3,0:2:6.02:0,6,158	0/0:10,0:2:2.48:0,2,78	0/0:7,1:2:1.37:0,1,58	./.	./.	0/0:2,0:2:3.01:0,3,79	0/0:8,0:6:12.04:0,12,316	0/0:3,0:3:8.86:0,9,113	0/0:5,0:5:8.96:0,9,311	0/0:4,0:3:3.01:0,3,79	0/1:4,2:6:90.14:90,0,164	0/1:4,0:4:7.87:8,0,166	0/0:2,0:2:6.02:0,6,131	0/1:2,1:3:47.86:48,0,79	0/0:7,0:7:18.06:0,18,438	0/0:1,0:1:3.01:0,3,79	0/0:6,0:6:11.97:0,12,197	./.	0/1:7,2:7:49.05:49,0,98	0/0:24,0:19:45.15:0,45,1168	1/1:0,1:1:3.01:54,3,0	0/0:1,0:1:2.74:0,3,12	./.	0/0:1,0:1:3.01:0,3,50	0/0:7,0:6:15.05:0,15,352	0/0:5,0:5:12.93:0,13,278	0/0:4,0:4:9.03:0,9,237
chr10	109671468	.	ACCTCC	A	422.54	PASS	AB=0.835;AC=10;AF=0.217;AN=46;BaseQRankSum=4.284;DP=181;FS=2.339;HRun=0;HaplotypeScore=35.8612;InbreedingCoeff=-0.1456;MQ=46.12;MQ0=16;MQRankSum=-4.010;QD=7.16;ReadPosRankSum=0.553;VQSLOD=1.0620;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:6:12.51:0,13,277	0/0:4,0:3:9.03:0,9,267	0/1:14,0:2:0.29:0,0,35	0/0:15,0:2:5.81:0,6,66	./.	1/1:0,1:1:3.01:61,3,0	0/0:6,0:6:12.04:0,12,309	0/0:10,0:6:12.04:0,12,323	0/1:4,3:6:99:165,0,251	0/0:4,0:4:12.04:0,12,334	./.	0/1:10,1:10:63.15:63,0,256	0/1:3,1:4:51.81:52,0,145	0/0:4,0:3:9.03:0,9,268	0/0:5,0:4:12.04:0,12,290	0/0:11,0:11:24.08:0,24,659	./.	0/0:4,0:4:6.02:0,6,176	./.	0/1:9,1:8:39.73:40,0,306	0/0:27,0:18:39.13:0,39,1112	0/0:2,0:2:3.48:0,3,74	0/1:2,1:3:50.98:51,0,94	./.	0/1:2,1:3:25.33:55,0,25	0/0:4,0:3:6.02:0,6,136	0/1:5,1:5:62.36:62,0,169	0/0:5,0:5:6.02:0,6,146
chr10	109671495	.	CCCCT	C	175.20	PASS	AB=0.817;AC=5;AF=0.109;AN=46;BaseQRankSum=1.425;DP=173;FS=2.174;HRun=0;HaplotypeScore=38.5154;InbreedingCoeff=-0.0770;MQ=67.64;MQ0=11;MQRankSum=-0.800;QD=3.89;ReadPosRankSum=-0.267;VQSLOD=1.2537;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:8:16.30:0,16,329	0/0:2,0:2:6.02:0,6,158	0/1:15,1:7:37.42:37,0,187	0/1:12,3:5:1.14:104,0,1	0/0:1,0:1:3.01:0,3,79	./.	0/1:7,1:8:41.84:42,0,300	0/0:8,0:6:15.05:0,15,369	0/0:6,0:5:12.04:0,12,266	0/0:6,0:5:11.95:0,12,237	0/0:2,0:2:6.02:0,6,116	0/0:9,0:8:0.54:0,1,216	0/0:3,0:3:3.01:0,3,61	0/0:5,0:4:12.04:0,12,311	0/0:5,0:4:12.04:0,12,314	0/0:10,0:10:21.05:0,21,484	0/0:5,0:3:6.02:0,6,113	0/0:5,0:4:9.03:0,9,198	./.	0/0:6,0:6:18.05:0,18,422	0/0:19,0:12:23.72:0,24,619	0/0:2,0:2:2.82:0,3,79	0/1:1,1:2:50.35:50,0,73	./.	0/1:2,1:3:50.84:51,0,72	./.	0/0:8,0:7:18.04:0,18,337	./.
chr10	109672318	.	T	TC	416.66	PASS	AB=0.814;AC=15;AF=0.268;AN=56;BaseQRankSum=1.934;DP=197;FS=6.950;HRun=3;HaplotypeScore=66.9295;InbreedingCoeff=-0.2788;MQ=53.96;MQ0=1;MQRankSum=-4.299;QD=3.69;ReadPosRankSum=-2.168;VQSLOD=-0.7256;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,4:15:62.54:63,0,153	0/0:1,0:1:1.25:0,1,3	0/0:4,0:3:6.02:0,6,72	0/1:4,0:3:1.42:1,0,56	0/0:7,1:8:1.75:0,2,50	0/0:2,1:3:5.50:0,6,41	0/1:6,1:7:43.73:44,0,126	0/0:8,0:8:10.79:0,11,142	0/1:3,2:5:63.46:68,0,63	0/1:2,2:4:14.23:38,0,14	0/0:7,0:7:20.09:0,20,221	0/1:6,3:8:29.85:30,0,94	0/0:6,0:7:16.10:0,16,156	0/0:3,0:2:3.01:0,3,33	0/1:9,1:10:17.25:17,0,171	0/0:7,0:7:18.03:0,18,202	0/1:9,1:10:28.24:28,0,138	0/1:7,1:8:45.41:45,0,97	0/1:6,1:7:8.29:8,0,99	0/1:8,3:12:19.89:122,0,20	0/1:4,3:6:26.83:40,0,27	0/0:11,1:12:21.16:0,21,197	0/0:6,1:7:15.98:0,16,132	0/0:3,0:3:3.48:0,3,37	0/0:8,0:8:17.48:0,17,174	0/1:9,3:11:18.78:45,0,19	0/0:6,0:6:2.69:0,3,66	1/1:1,0:1:2.60:10,3,0
chr10	109672319	.	CCCT	C	1061.33	PASS	AB=0.826;AC=17;AF=0.304;AN=56;BaseQRankSum=0.672;DP=203;FS=3.467;HRun=0;HaplotypeScore=62.6369;InbreedingCoeff=-0.3870;MQ=53.41;MQ0=1;MQRankSum=-4.415;QD=8.16;ReadPosRankSum=-5.043;VQSLOD=0.9210;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:15:11.90:0,12,368	1/1:0,1:1:3.01:50,3,0	0/0:5,0:3:3.71:0,4,82	0/0:3,0:3:6.02:0,6,96	0/1:4,4:8:94.03:128,0,94	0/0:3,0:3:6.02:0,6,95	0/0:9,0:9:18.23:0,18,262	0/1:7,1:8:21.92:22,0,149	0/1:4,1:5:35.98:36,0,162	0/0:4,0:4:9.03:0,9,135	0/1:6,1:7:29.78:30,0,278	0/0:9,0:8:12.37:0,12,165	0/1:5,2:7:84.04:84,0,164	0/0:3,0:2:3.01:0,3,41	0/1:7,3:10:99:123,0,240	0/0:7,0:7:18.02:0,18,291	0/1:7,2:10:75.12:75,0,261	0/0:8,0:8:18.01:0,18,245	0/1:5,2:7:91.24:91,0,114	0/1:7,4:12:99:181,0,112	0/1:7,0:6:9.43:9,0,89	0/1:10,2:12:90.17:90,0,201	0/1:5,2:7:84.01:84,0,198	0/0:3,0:3:2.93:0,3,45	0/1:8,1:9:42.72:43,0,169	0/1:10,3:12:99:134,0,101	0/1:6,1:7:32.45:32,0,174	0/0:1,0:1:3.01:0,3,32
chr10	109672320	.	C	CCA	116.30	PASS	AB=0.947;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.432;DP=206;FS=0.000;HRun=0;HaplotypeScore=73.4982;InbreedingCoeff=-0.0096;MQ=53.26;MQ0=1;MQRankSum=-2.736;QD=2.08;ReadPosRankSum=0.330;VQSLOD=1.4568;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:15:44.13:44,0,240	0/0:1,0:1:2.84:0,3,14	0/0:5,0:3:6.02:0,6,92	0/1:4,0:3:2.28:2,0,71	0/0:8,0:8:14.34:0,14,127	0/0:3,0:3:5.98:0,6,52	0/0:9,0:9:17.19:0,17,208	0/0:8,0:8:15.89:0,16,206	0/0:5,0:5:10.89:0,11,110	0/0:4,0:4:2.87:0,3,43	0/0:7,0:7:20.90:0,21,289	0/0:9,0:8:15.23:0,15,168	0/0:7,0:7:17.72:0,18,212	0/0:3,0:2:3.01:0,3,43	0/0:11,0:11:26.41:0,26,282	0/0:7,0:7:17.80:0,18,270	0/0:10,0:10:1.74:0,2,228	0/0:8,0:8:6.97:0,7,143	0/0:7,0:7:11.86:0,12,152	0/1:12,0:12:38.64:39,0,78	0/0:7,0:6:14.22:0,14,98	0/0:12,0:12:20.42:0,20,240	0/0:7,0:7:17.72:0,18,202	0/0:3,0:3:2.93:0,3,46	0/0:9,0:9:16.29:0,16,206	0/1:13,1:13:21.63:22,0,80	0/1:6,2:8:69.42:69,0,102	1/1:0,1:1:3.01:58,3,0
chr10	109672340	.	TCC	T	712.27	PASS	AB=0.784;AC=11;AF=0.204;AN=54;BaseQRankSum=4.729;DP=241;FS=8.999;HRun=5;HaplotypeScore=77.0849;InbreedingCoeff=-0.2179;MQ=53.29;MQ0=1;MQRankSum=-4.765;QD=6.30;ReadPosRankSum=1.255;VQSLOD=-0.7417;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:12,10:20:99:329,0,297	0/0:1,0:1:3.01:0,3,39	0/0:6,0:5:11.99:0,12,130	0/1:5,0:3:3.73:4,0,39	0/0:11,0:11:12.84:0,13,99	./.	0/0:8,0:8:14.05:0,14,297	0/0:8,0:7:15.05:0,15,207	0/1:7,1:8:49.95:50,0,167	0/0:4,1:6:8.39:0,8,101	0/0:10,0:11:20.41:0,20,279	0/1:6,2:9:18.87:19,0,171	0/0:8,0:8:24.01:0,24,329	0/0:5,0:4:7.74:0,8,130	0/0:11,1:12:9.91:0,10,360	0/0:12,0:11:30.05:0,30,424	0/1:10,3:14:52.14:52,0,330	0/1:8,1:9:20.83:21,0,254	0/0:6,0:7:14.64:0,15,143	0/1:8,3:12:69.09:114,0,69	0/1:4,2:6:11.32:23,0,11	0/0:10,0:12:15.35:0,15,298	0/0:10,0:10:29.80:0,30,249	0/0:3,0:3:5.98:0,6,109	0/0:6,0:7:12.03:0,12,191	0/1:8,3:14:99:109,0,121	0/1:8,2:10:92.31:96,0,92	0/1:1,1:2:3.93:36,0,4
chr10	109672342	.	C	CT	511.93	PASS	AB=0.889;AC=12;AF=0.222;AN=54;BaseQRankSum=6.189;DP=244;FS=14.119;HRun=0;HaplotypeScore=79.5968;InbreedingCoeff=-0.2960;MQ=53.21;MQ0=1;MQRankSum=-6.066;QD=4.20;ReadPosRankSum=0.332;VQSLOD=2.1465;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:21:7.55:8,0,233	0/0:1,0:1:2.90:0,3,16	0/0:6,0:5:10.06:0,10,75	0/0:5,0:3:8.22:0,8,58	0/1:10,0:10:7.20:7,0,63	./.	0/0:9,0:9:20.58:0,21,244	0/0:7,0:6:17.46:0,17,153	0/1:8,0:8:3.20:3,0,112	0/0:6,0:6:10.46:0,10,83	0/0:11,0:11:23.77:0,24,266	0/1:11,0:10:9.21:9,0,132	0/1:5,3:8:99:104,0,150	0/1:3,2:4:71.35:72,0,71	0/1:8,4:12:99:138,0,225	0/0:13,0:12:29.41:0,29,261	0/0:14,0:14:20.29:0,20,265	0/0:9,0:9:11.40:0,11,212	0/1:7,0:7:0.15:0,0,144	0/0:12,0:12:1.50:0,2,64	0/0:4,0:4:1.99:0,2,28	0/1:10,2:12:58.52:59,0,206	0/1:4,6:10:76.68:222,0,77	0/0:4,0:4:6.02:0,6,84	0/0:7,0:7:12.03:0,12,151	0/0:13,0:13:4.94:0,5,77	0/1:14,0:13:6:6,0,88	0/1:2,0:2:14.94:15,0,15
chr10	109674169	.	GT	G	9028.49	PASS	AB=0.981;AC=51;AF=0.911;AN=56;BaseQRankSum=5.079;DP=781;FS=6.944;HRun=1;HaplotypeScore=141.2290;InbreedingCoeff=-0.0916;MQ=77.73;MQ0=0;MQRankSum=-2.646;QD=11.56;ReadPosRankSum=8.929;VQSLOD=2.6350;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:48,0:48:92.09:553,92,0	1/1:9,2:11:31.54:201,32,0	0/1:23,0:23:93.06:103,0,93	0/1:17,2:19:38.52:114,0,39	1/1:10,0:10:28.88:166,29,0	1/1:23,0:23:61.66:310,62,0	1/1:45,2:47:62.71:493,63,0	0/1:34,0:34:23.70:238,0,24	1/1:27,0:27:27.62:353,28,0	1/1:16,1:17:47.85:311,48,0	0/1:11,0:11:0.79:93,0,1	1/1:46,0:46:93.56:617,94,0	1/1:24,0:24:59.40:319,59,0	1/1:37,2:39:73.63:542,74,0	1/1:42,0:42:91.60:587,92,0	1/1:42,0:42:99:596,111,0	1/1:54,0:54:99:632,126,0	1/1:37,0:37:93.95:437,94,0	0/1:27,0:27:30.92:202,0,31	1/1:9,0:9:19.45:91,19,0	1/1:54,0:54:77.10:505,77,0	1/1:20,0:20:25.53:227,26,0	1/1:11,0:11:19.73:102,20,0	1/1:36,0:35:76.23:389,76,0	1/1:21,0:21:48.16:254,48,0	1/1:18,1:19:47.07:255,47,0	1/1:23,0:23:27.14:300,27,0	1/1:7,0:7:8.14:38,8,0
chr10	109674332	.	TG	T	12519.17	PASS	AB=0.733;AC=54;AF=0.964;AN=56;BaseQRankSum=-3.262;DP=445;FS=12.716;HRun=2;HaplotypeScore=129.5300;InbreedingCoeff=-0.0476;MQ=56.49;MQ0=0;MQRankSum=-3.881;QD=28.13;ReadPosRankSum=1.155;VQSLOD=3.2729;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:63.16:797,63,0	1/1:0,9:9:23.97:256,24,0	0/1:5,5:10:98.89:168,0,99	0/1:9,3:9:68.14:96,0,68	1/1:0,10:10:5.98:59,6,0	1/1:1,10:10:26.98:310,27,0	1/1:2,21:23:59.64:718,60,0	1/1:2,20:22:60.19:776,60,0	1/1:3,19:22:54.09:662,54,0	1/1:0,13:13:39.13:506,39,0	1/1:0,5:5:12.04:156,12,0	1/1:1,22:23:69.07:835,69,0	1/1:0,12:12:36.12:466,36,0	1/1:3,22:25:60:699,60,0	1/1:1,20:21:59.98:682,60,0	1/1:2,26:28:72.21:907,72,0	1/1:1,16:17:42.03:504,42,0	1/1:3,8:11:14.11:354,14,0	1/1:4,16:20:51.16:653,51,0	1/1:1,11:12:24.08:311,24,0	1/1:2,25:27:29.87:353,30,0	1/1:3,13:16:35.97:397,36,0	1/1:0,7:7:8.77:72,9,0	1/1:0,18:18:20.95:234,21,0	1/1:0,17:17:45.02:526,45,0	1/1:3,9:12:36.11:455,36,0	1/1:1,12:13:39.06:470,39,0	1/1:0,3:3:8.99:98,9,0
chr10	109674350	.	AT	A	11347.92	PASS	AB=0.746;AC=54;AF=0.964;AN=56;BaseQRankSum=-3.333;DP=407;FS=5.959;HRun=3;HaplotypeScore=118.5018;InbreedingCoeff=-0.0437;MQ=54.94;MQ0=0;MQRankSum=-3.210;QD=27.88;ReadPosRankSum=1.807;VQSLOD=3.9501;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:22:56.95:648,57,0	1/1:0,8:8:21.03:244,21,0	0/1:5,4:9:43.75:97,0,44	0/1:6,2:5:28.76:43,0,29	1/1:0,10:10:18.01:206,18,0	1/1:1,8:8:24.08:297,24,0	1/1:5,17:22:45.03:520,45,0	1/1:2,24:26:69.18:829,69,0	1/1:1,19:20:57.14:688,57,0	1/1:1,14:15:42.13:520,42,0	1/1:3,7:10:24.02:256,24,0	1/1:1,24:25:63.20:779,63,0	1/1:1,14:15:36.11:445,36,0	1/1:0,22:22:57.05:653,57,0	1/1:0,19:19:45.10:539,45,0	1/1:2,21:23:63.20:780,63,0	1/1:3,11:14:27.04:317,27,0	1/1:0,5:5:15.05:186,15,0	1/1:8,7:15:30.01:330,30,0	1/1:1,10:11:30.05:354,30,0	1/1:6,23:29:65.50:733,65,0	1/1:1,13:14:33.06:391,33,0	1/1:0,5:5:12.04:148,12,0	1/1:0,17:17:20.98:242,21,0	1/1:1,14:15:38.71:455,39,0	1/1:0,7:7:18.05:221,18,0	1/1:0,10:10:30.05:354,30,0	1/1:0,2:2:6.02:74,6,0
chr10	109674408	.	G	GC	571.91	PASS	AB=0.954;AC=30;AF=0.536;AN=56;BaseQRankSum=3.017;DP=298;FS=8.185;HRun=0;HaplotypeScore=105.1272;InbreedingCoeff=-0.1374;MQ=85.11;MQ0=0;MQRankSum=-9.863;QD=2.32;ReadPosRankSum=6.262;VQSLOD=1.4141;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,1:11:22.87:26,0,23	0/1:5,0:5:24.17:27,0,24	0/0:11,0:11:26.59:0,27,159	0/1:17,0:17:4.84:5,0,125	0/0:2,0:2:0:0,0,0	1/1:6,1:7:7.27:39,7,0	0/1:15,0:15:17.64:18,0,30	0/0:26,0:26:35.44:0,35,257	0/1:13,0:14:6.57:66,0,7	0/1:14,1:15:43.44:43,0,85	0/1:10,0:10:14.43:14,0,52	0/1:26,0:26:49.51:119,0,50	0/1:11,2:13:27.68:76,0,28	0/1:11,1:12:39.75:40,0,67	0/1:9,0:9:15.35:41,0,15	1/1:13,0:13:11.78:47,12,0	0/0:3,0:3:6.02:0,6,74	0/0:3,0:3:0.22:0,0,5	0/1:14,1:15:7.33:7,0,145	1/1:6,0:6:2.02:16,2,0	0/1:15,0:15:1.57:2,0,10	0/0:7,0:7:5.69:0,6,55	1/1:2,1:3:2.37:8,2,0	1/1:4,0:4:6.11:18,6,0	1/1:19,0:19:4.48:49,4,0	0/1:9,2:11:28.19:28,0,60	1/1:4,0:4:7.98:30,8,0	1/1:2,0:2:2.49:6,2,0
chr10	109674972	.	AT	A	835.83	PASS	AB=0.963;AC=25;AF=0.446;AN=56;BaseQRankSum=4.805;DP=342;FS=3.475;HRun=13;HaplotypeScore=62.8482;InbreedingCoeff=0.6705;MQ=70.19;MQ0=4;MQRankSum=-3.545;QD=6.85;ReadPosRankSum=2.223;VQSLOD=2.5238;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,1:21:32.84:0,33,279	0/0:5,0:5:12.02:0,12,117	0/0:21,0:11:20.60:0,21,170	0/1:17,0:10:0.65:1,0,94	1/1:4,9:13:29.67:206,30,0	1/1:3,13:16:40.48:277,40,0	1/1:5,2:7:8.90:62,9,0	0/0:38,1:40:44.89:0,45,519	1/1:3,8:12:25.77:171,26,0	0/1:7,1:8:6.89:7,0,102	0/0:11,1:12:2.12:0,2,178	1/1:0,0:9:10.19:29,10,0	1/1:1,0:3:2.04:6,2,0	1/1:2,0:6:6.11:17,6,0	1/1:2,0:6:6.10:17,6,0	0/0:3,0:3:9.01:0,9,88	0/0:24,0:24:40.89:0,41,354	0/0:23,0:23:39.87:0,40,344	0/0:18,0:17:32.74:0,33,291	0/0:5,0:5:6.01:0,6,58	0/0:15,0:14:17.95:0,18,149	0/0:3,0:3:0.76:0,1,2	1/1:4,0:5:2.03:6,2,0	1/1:1,0:2:2.03:6,2,0	1/1:4,10:14:29.73:212,30,0	0/0:16,0:17:38.86:0,39,347	0/0:11,0:11:20.24:0,20,176	0/1:3,0:3:1.11:2,0,1
chr10	109674986	.	ATATT	A	5295.81	PASS	AC=30;AF=0.577;AN=52;BaseQRankSum=-0.201;DP=304;FS=0.000;HRun=0;HaplotypeScore=60.3483;InbreedingCoeff=0.8155;MQ=67.19;MQ0=6;MQRankSum=-3.368;QD=22.83;ReadPosRankSum=0.166;VQSLOD=4.3101;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,15:20:21.07:352,21,0	0/0:4,0:4:12.04:0,12,288	1/1:23,0:9:2.37:8,2,0	0/0:14,0:8:5.57:0,6,23	1/1:9,5:14:18.06:288,18,0	1/1:8,7:15:33.09:475,33,0	1/1:2,2:4:12.04:195,12,0	1/1:17,15:32:45.14:717,45,0	1/1:4,5:9:15.05:227,15,0	0/0:8,0:8:18.06:0,18,402	0/0:10,0:10:18.06:0,18,440	0/0:12,0:11:20.08:0,20,126	0/0:1,0:1:2.99:0,3,24	0/0:4,0:4:8.39:0,8,40	0/0:5,0:5:11.52:0,12,66	0/0:5,0:5:9.03:0,9,216	1/1:8,15:23:39.13:646,39,0	1/1:3,17:20:32.76:553,33,0	1/1:10,8:17:21.03:292,21,0	./.	1/1:5,3:7:12.04:201,12,0	./.	0/0:2,0:2:2.68:0,3,13	0/0:2,0:2:2.71:0,3,13	1/1:7,8:15:36.12:569,36,0	1/1:8,9:17:27.09:430,27,0	1/1:6,3:9:9.03:151,9,0	1/1:4,0:4:12.04:193,12,0
chr10	109675276	.	GC	G	1206.01	PASS	AB=0.875;AC=20;AF=0.357;AN=56;BaseQRankSum=4.939;DP=411;FS=15.442;HRun=11;HaplotypeScore=44.3198;InbreedingCoeff=0.1380;MQ=74.22;MQ0=1;MQRankSum=0.064;QD=5.03;ReadPosRankSum=3.042;VQSLOD=0.3057;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:25,2:27:25.26:25,0,144	0/0:4,0:4:3.01:0,3,32	0/0:13,0:12:6.01:0,6,57	0/0:8,0:8:10.38:0,10,95	1/1:7,5:13:17:128,17,0	1/1:4,7:12:20:153,20,0	1/1:12,19:32:40.94:326,41,0	0/0:15,1:16:8.94:0,9,71	1/1:2,18:20:41.92:344,42,0	0/1:10,0:10:7.30:7,0,113	0/0:1,0:1:3.01:0,3,32	0/0:15,0:15:18:0,18,169	0/0:11,0:11:17.98:0,18,150	0/0:15,1:16:5.37:0,5,226	0/1:18,3:21:21.13:21,0,365	0/1:16,2:18:25.32:25,0,137	0/0:23,3:26:10.93:0,11,512	0/1:13,2:15:19.22:19,0,216	0/1:12,7:20:15.69:198,0,16	0/1:7,1:8:15.64:16,0,41	0/0:29,0:29:17.27:0,17,211	0/1:4,1:6:22.44:22,0,24	0/0:6,0:6:6:0,6,56	0/0:14,2:16:11.42:0,11,291	1/1:4,3:8:11.02:80,11,0	0/1:20,1:22:10.10:10,0,139	0/0:9,0:9:20.97:0,21,190	0/1:7,1:8:9.61:10,0,113
chr10	109676821	.	CCGG	C	16968.96	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=9.422;DP=578;FS=8.157;HRun=0;HaplotypeScore=112.8607;InbreedingCoeff=0.9683;MQ=81.62;MQ0=0;MQRankSum=-5.114;QD=36.34;ReadPosRankSum=4.506;VQSLOD=5.7480;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,34:39:96.33:1524,96,0	0/0:7,0:7:18.06:0,18,395	0/0:20,0:20:51.17:0,51,1095	0/0:16,0:16:9.68:0,10,615	1/1:1,11:12:24.08:373,24,0	1/1:2,17:19:42.14:663,42,0	1/1:5,28:33:81.28:1301,81,0	1/1:3,18:21:54.17:842,54,0	1/1:3,17:20:45.15:723,45,0	0/0:30,0:30:72.25:0,72,1538	0/0:14,0:14:33.11:0,33,694	1/1:2,26:28:63.21:1012,63,0	1/1:1,18:19:42.14:675,42,0	1/1:1,18:19:45.15:723,45,0	1/1:1,24:25:66.11:1060,66,0	0/0:23,1:24:14.98:0,15,1236	1/1:1,17:18:42.14:675,42,0	1/1:2,27:29:69.23:1109,69,0	1/1:2,14:16:42.12:650,42,0	1/1:0,10:10:21.07:337,21,0	1/1:7,32:39:67.64:1063,68,0	1/1:1,16:17:36.12:554,36,0	1/1:1,15:16:30.10:469,30,0	1/1:1,17:18:36.12:578,36,0	1/1:2,16:18:42.14:663,42,0	1/1:4,24:28:9.02:1067,9,0	1/1:2,16:18:42.14:663,42,0	1/1:0,5:5:15.05:241,15,0
chr10	109679550	.	CCAGGG	C	6839.12	PASS	AB=1.000;AC=33;AF=0.660;AN=50;BaseQRankSum=7.587;DP=553;FS=5.094;HRun=0;HaplotypeScore=108.5271;InbreedingCoeff=0.7604;MQ=79.55;MQ0=5;MQRankSum=-0.657;QD=19.65;ReadPosRankSum=3.574;VQSLOD=4.3977;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,6:21:18.06:303,18,0	0/0:7,0:7:15.05:0,15,419	0/0:40,0:30:8.71:0,9,100	0/0:52,0:25:6.28:0,6,73	0/0:6,0:6:3.01:0,3,84	0/0:12,0:12:12.04:0,12,335	0/0:36,0:36:42.62:0,43,1167	./.	0/0:16,0:16:24.08:0,24,668	./.	./.	1/1:19,14:32:36.12:645,36,0	1/1:8,11:19:26.62:482,27,0	1/1:8,14:22:39.13:699,39,0	1/1:14,10:24:24.08:430,24,0	0/0:14,0:14:30.10:0,30,839	1/1:13,18:30:45.15:807,45,0	1/1:13,14:27:36.12:631,36,0	1/1:9,2:11:6.02:108,6,0	1/1:6,3:9:5.56:73,6,0	1/1:26,7:32:18.06:322,18,0	1/1:12,5:18:11.32:214,11,0	1/1:2,2:4:3.01:54,3,0	1/1:17,20:37:42.14:753,42,0	0/1:12,0:12:44.65:45,0,159	1/1:10,3:13:9.03:161,9,0	1/1:8,12:20:33.11:592,33,0	1/1:3,10:14:30.10:519,30,0
chr10	109680022	.	GGA	G	1717.38	PASS	AC=40;AF=0.769;AN=52;BaseQRankSum=10.483;DP=259;FS=31.539;HRun=0;HaplotypeScore=95.4231;InbreedingCoeff=0.6262;MQ=100.19;MQ0=0;MQRankSum=-9.392;QD=21.74;ReadPosRankSum=4.856;VQSLOD=2.1291;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,4:5:9.02:95,9,0	0/0:10,0:10:30.10:0,30,591	0/0:28,0:27:74.88:0,75,1504	0/0:39,0:39:82.77:0,83,1852	1/1:0,1:1:3.01:49,3,0	1/1:1,2:3:9.03:145,9,0	1/1:0,1:1:3.01:49,3,0	./.	1/1:0,3:3:9.03:146,9,0	0/0:31,0:31:93.32:0,93,1888	0/0:17,0:17:51.16:0,51,948	1/1:0,7:7:6.01:77,6,0	1/1:0,5:5:3.01:49,3,0	1/1:0,4:4:3.01:49,3,0	1/1:0,8:8:3.01:30,3,0	0/0:54,0:54:99:0,163,3190	1/1:0,7:7:9.48:235,9,0	1/1:0,3:3:9.03:146,9,0	1/1:0,2:2:6.02:98,6,0	1/1:0,3:3:6.02:78,6,0	1/1:1,7:8:8.46:103,8,0	1/1:0,2:2:2.74:12,3,0	./.	1/1:1,5:6:8.92:113,9,0	1/1:0,2:2:6.02:96,6,0	1/1:0,4:4:12.04:195,12,0	1/1:0,3:3:3.01:43,3,0	1/1:0,2:2:6.02:82,6,0
chr10	109680032	.	G	GT	459.82	PASS	AB=0.578;AC=34;AF=0.680;AN=50;BaseQRankSum=9.217;DP=261;FS=34.186;HRun=0;HaplotypeScore=96.4010;InbreedingCoeff=0.4908;MQ=99.08;MQ0=0;MQRankSum=-8.257;QD=6.76;ReadPosRankSum=3.294;VQSLOD=1.2748;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:2.04:6,2,0	0/0:10,0:10:30.09:0,30,390	0/0:29,0:28:74.41:0,74,1023	0/0:34,0:34:65.40:0,65,1120	1/1:0,1:1:2.96:19,3,0	0/1:1,2:3:1.62:31,0,2	1/1:0,1:1:2.97:20,3,0	./.	1/1:0,3:3:8.91:61,9,0	0/0:35,0:35:99:0,99,1337	0/0:18,0:18:48.16:0,48,670	1/1:0,7:7:2.98:21,3,0	1/1:0,5:5:2.88:15,3,0	1/1:0,4:4:2.97:20,3,0	./.	0/0:55,0:55:99:0,159,2136	1/1:0,7:7:11.27:101,11,0	1/1:0,3:3:8.94:65,9,0	1/1:0,2:2:5.97:45,6,0	1/1:0,3:3:2.96:19,3,0	1/1:0,7:7:5.53:42,6,0	0/0:0,2:2:2.98:0,3,21	./.	1/1:0,5:5:2.29:8,2,0	1/1:0,2:2:5.97:47,6,0	0/1:1,4:5:11.93:70,0,12	1/1:0,3:3:2.90:16,3,0	1/1:0,2:2:2.90:16,3,0
chr10	109680037	.	GA	G	1056.98	PASS	AB=0.519;AC=31;AF=0.620;AN=50;BaseQRankSum=8.989;DP=266;FS=51.352;HRun=1;HaplotypeScore=94.7630;InbreedingCoeff=0.5193;MQ=96.51;MQ0=0;MQRankSum=-9.168;QD=17.05;ReadPosRankSum=1.625;VQSLOD=0.7439;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:2.96:19,3,0	0/0:9,0:9:27.08:0,27,409	0/0:31,0:29:58.09:0,58,1149	0/0:39,0:38:85.51:0,86,1577	1/1:0,1:1:3.01:42,3,0	1/1:0,3:3:9.03:125,9,0	1/1:0,1:1:3.01:42,3,0	./.	1/1:0,3:3:9.03:125,9,0	0/0:33,0:33:99:0,99,1563	0/0:20,0:20:54.17:0,54,838	1/1:0,7:7:3.01:42,3,0	1/1:0,5:5:3.01:42,3,0	1/1:0,4:4:3.01:42,3,0	./.	0/0:54,0:54:99:0,163,2590	1/1:0,7:7:3.43:173,3,0	1/1:0,3:3:9.03:126,9,0	1/1:0,2:2:6.02:84,6,0	./.	1/1:0,7:7:7.27:87,7,0	0/0:0,2:2:2.50:0,2,9	0/1:0,2:2:0:0,0,0	0/0:0,5:5:0.89:0,1,2	1/1:0,2:2:6.02:83,6,0	0/1:1,4:5:32.93:152,0,33	1/1:0,3:3:3.01:32,3,0	0/1:0,2:2:0:0,0,0
chr10	109680044	.	A	ATC	2524.72	PASS	AB=0.929;AC=38;AF=0.704;AN=54;BaseQRankSum=10.991;DP=279;FS=74.625;HRun=0;HaplotypeScore=121.0558;InbreedingCoeff=0.5281;MQ=89.66;MQ0=0;MQRankSum=-11.292;QD=31.17;ReadPosRankSum=-2.306;VQSLOD=0.3677;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,1:6:5.28:96,5,0	0/0:10,0:10:27.09:0,27,414	0/0:38,0:35:58.77:0,59,1288	0/0:39,0:39:47.41:0,47,1408	1/1:0,0:1:3.01:38,3,0	1/1:0,0:3:7.88:55,8,0	1/1:0,0:1:2.37:8,2,0	./.	1/1:0,0:3:7.24:25,7,0	0/0:33,0:33:96.30:0,96,1415	0/0:23,0:23:63.20:0,63,943	1/1:6,1:7:21.07:392,21,0	1/1:4,1:5:9.03:173,9,0	1/1:3,1:4:6.02:115,6,0	1/1:8,0:8:21.07:392,21,0	0/0:51,0:51:99:0,154,2342	1/1:4,3:7:4.12:236,4,0	1/1:2,1:3:9.03:173,9,0	1/1:2,0:2:6.02:98,6,0	1/1:3,0:3:6:115,6,0	1/1:5,3:8:12.93:232,13,0	0/0:1,1:2:1.55:0,2,4	1/1:1,0:2:5.05:64,5,0	0/1:5,1:6:49.13:100,0,49	1/1:0,0:2:6.02:75,6,0	0/1:5,0:5:30.90:198,0,31	1/1:3,0:3:3.01:57,3,0	1/1:2,0:2:3.01:58,3,0
chr10	109680048	.	TGA	T	64.51	PASS	AB=1.000;AC=15;AF=0.341;AN=44;BaseQRankSum=6.020;DP=227;FS=16.345;HRun=0;HaplotypeScore=80.8476;InbreedingCoeff=0.4902;MQ=100.69;MQ0=0;MQRankSum=-6.407;QD=4.61;ReadPosRankSum=-2.940;VQSLOD=0.0824;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:2.69:0,3,8	0/0:10,0:10:30.10:0,30,601	0/0:41,1:38:76.83:0,77,1832	0/0:40,0:38:99:0,111,2004	1/1:0,1:1:2.50:9,2,0	1/1:0,3:3:8.43:49,8,0	1/1:0,1:1:2.96:19,3,0	./.	1/1:0,3:3:8.88:58,9,0	0/0:34,0:34:99:0,99,1913	0/0:21,0:21:57.20:0,57,1149	0/0:1,0:1:1.55:0,2,4	0/0:1,0:1:1.55:0,2,4	0/0:1,0:1:1.55:0,2,4	./.	0/0:51,0:51:99:0,154,3097	0/0:3,0:3:4.81:0,5,32	0/0:1,0:1:2.99:0,3,24	./.	./.	0/0:4,0:4:2.90:0,3,35	1/1:1,0:1:0.47:1,0,0	1/1:0,1:1:3.01:34,3,0	0/1:2,0:2:6.12:6,0,29	1/1:0,2:2:4.99:19,5,0	0/0:1,0:1:3.01:0,3,61	./.	./.
chr10	109680055	.	G	GTTA	185.97	PASS	AB=0.786;AC=12;AF=0.300;AN=40;BaseQRankSum=5.601;DP=233;FS=0.000;HRun=0;HaplotypeScore=89.8322;InbreedingCoeff=0.4972;MQ=102.98;MQ0=0;MQRankSum=-4.033;QD=13.28;ReadPosRankSum=-1.995;VQSLOD=2.7502;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,1:3:3.48:41,3,0	0/0:9,0:9:27.08:0,27,471	0/0:42,0:38:81:0,81,1636	0/0:42,0:41:99:0,114,1849	0/1:1,0:1:0:0,0,0	0/0:3,0:3:5.99:0,6,67	0/0:1,0:1:3:0,3,25	./.	0/0:3,0:3:9.01:0,9,109	0/0:38,0:38:99:0,108,1944	0/0:19,0:19:54.17:0,54,952	1/1:0,1:1:3.01:55,3,0	1/1:0,1:1:3.01:37,3,0	1/1:0,1:1:3.01:55,3,0	./.	0/0:52,0:52:99:0,156,2748	1/1:0,3:3:6.91:115,7,0	./.	./.	./.	0/1:1,3:4:2.38:3,0,2	0/0:0,1:1:2.92:0,3,17	0/0:1,0:1:2.98:0,3,21	0/0:1,1:2:1.05:0,1,12	./.	0/0:1,0:1:3.01:0,3,56	./.	./.
chr10	109680126	.	TAG	T	126.42	PASS	AB=0.867;AC=7;AF=0.292;AN=24;BaseQRankSum=4.427;DP=194;FS=5.715;HRun=0;HaplotypeScore=93.4923;InbreedingCoeff=0.3271;MQ=129.93;MQ0=0;MQRankSum=-4.355;QD=11.49;ReadPosRankSum=0.637;VQSLOD=3.1242;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:3,0:3:32.25:42,0,32	0/0:10,0:10:30.10:0,30,586	0/0:37,0:37:99:0,108,2025	0/0:30,0:29:74.80:0,75,1270	./.	./.	./.	./.	./.	0/0:37,0:37:99:0,111,2160	0/0:20,0:20:60.19:0,60,1181	./.	./.	./.	./.	0/0:44,0:44:99:0,132,2584	0/1:1,2:2:33.51:43,0,34	1/1:0,2:2:6.02:97,6,0	./.	./.	./.	1/1:0,1:1:3.01:38,3,0	./.	0/1:2,0:2:0.93:7,0,1	./.	0/0:1,0:1:3.01:0,3,59	./.	./.
chr10	109680142	.	G	GT	128.24	PASS	AB=0.750;AC=10;AF=0.238;AN=42;BaseQRankSum=4.826;DP=236;FS=28.560;HRun=0;HaplotypeScore=65.3858;InbreedingCoeff=0.5284;MQ=98.68;MQ0=1;MQRankSum=-5.464;QD=6.41;ReadPosRankSum=-3.485;VQSLOD=1.1257;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,1:4:6.02:0,6,83	0/0:8,0:8:23.91:0,24,304	0/0:39,0:36:99:0,106,1354	0/0:36,0:32:92.81:0,93,1173	./.	1/1:1,2:3:9.01:83,9,0	./.	1/1:5,2:6:14.17:98,14,0	./.	0/0:34,0:34:93.23:0,93,1255	0/0:21,0:21:54.16:0,54,736	0/0:6,0:6:1.99:0,2,6	./.	0/0:4,0:4:1.77:0,2,6	0/0:3,0:3:2.04:0,2,6	0/0:42,0:42:99:0,123,1705	0/0:3,0:2:6:0,6,65	0/0:3,0:3:7.70:0,8,43	./.	0/1:0,1:1:0:0,0,0	0/0:1,1:2:0.89:0,1,2	0/1:4,0:4:8.53:9,0,10	./.	0/0:7,0:7:8.04:0,8,66	1/1:0,1:1:3.01:33,3,0	1/1:2,2:4:3.26:28,3,0	0/0:1,0:1:0.47:0,0,1	./.
chr10	109680283	.	GGC	G	1398.34	PASS	AB=0.939;AC=11;AF=0.196;AN=56;BaseQRankSum=7.909;DP=811;FS=9.470;HRun=0;HaplotypeScore=148.3656;InbreedingCoeff=0.9176;MQ=68.85;MQ0=2;MQRankSum=-4.131;QD=18.40;ReadPosRankSum=-2.752;VQSLOD=3.0116;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,102,1808	0/0:18,0:18:38.98:0,39,662	0/1:28,2:31:1.68:2,0,1031	0/0:32,0:32:31.92:0,32,1131	1/1:2,6:7:12.03:180,12,0	1/1:0,8:8:18.06:270,18,0	1/1:2,10:12:33.05:447,33,0	0/0:46,0:44:99:0,123,2128	1/1:0,12:12:33:444,33,0	0/0:34,0:34:96.28:0,96,1751	0/0:18,0:18:51.17:0,51,953	0/0:38,0:38:99:0,105,1954	0/0:39,0:39:99:0,105,1978	0/0:39,0:39:99:0,105,1882	0/0:43,0:42:99:0,123,2252	0/0:48,0:48:99:0,138,2507	0/0:26,0:26:63.22:0,63,1188	0/0:21,0:21:60.21:0,60,1134	0/0:15,0:15:41.66:0,42,659	0/0:24,0:24:60.21:0,60,1110	0/0:59,0:59:99:0,99,1815	0/0:35,0:35:93.11:0,93,1694	0/0:20,0:20:45.15:0,45,825	0/0:45,0:45:96.33:0,96,1790	1/1:0,5:5:15.05:226,15,0	0/0:48,0:48:99:0,138,2467	0/0:25,0:25:69.22:0,69,1268	0/0:17,0:17:51.14:0,51,926
chr10	109680360	.	G	GTT	8888.75	PASS	AB=0.762;AC=26;AF=0.464;AN=56;BaseQRankSum=16.283;DP=910;FS=1.779;HRun=2;HaplotypeScore=255.2066;InbreedingCoeff=0.4041;MQ=59.01;MQ0=2;MQRankSum=-13.845;QD=16.07;ReadPosRankSum=4.284;VQSLOD=2.5145;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,25:50:15.83:696,16,0	0/0:19,0:19:54.16:0,54,822	0/0:28,0:26:63.49:0,63,854	0/0:38,0:36:65.99:0,66,1249	0/0:28,0:27:81.19:0,81,1186	0/0:30,0:30:81.28:0,81,1278	0/0:35,0:35:99:0,102,1599	0/1:37,11:48:80.08:636,0,80	0/0:30,0:30:78.18:0,78,1177	0/0:35,0:35:99:0,99,1508	0/0:28,0:28:84.26:0,84,1292	1/1:20,23:43:17.44:912,17,0	1/1:14,13:26:1.50:573,2,0	1/1:14,22:36:4.99:746,5,0	1/1:21,22:43:14.88:976,15,0	0/0:56,0:56:99:0,166,2565	0/1:13,10:21:21.83:337,0,22	0/1:14,4:18:19.07:218,0,19	0/1:17,6:23:57.27:325,0,57	1/1:21,14:35:15.36:493,15,0	0/1:43,12:52:80.23:566,0,80	1/1:12,9:22:20.40:377,20,0	0/1:9,5:13:1.75:209,0,2	1/1:24,11:34:9.11:475,9,0	0/0:30,0:30:90.11:0,90,1340	0/1:29,17:46:9.68:812,0,10	0/1:11,8:19:11.01:211,0,11	1/1:5,7:12:30.91:328,31,0
chr10	109680361	.	G	GT	1740.45	PASS	AB=0.734;AC=21;AF=0.375;AN=56;BaseQRankSum=17.941;DP=916;FS=4.457;HRun=1;HaplotypeScore=269.7376;InbreedingCoeff=0.1575;MQ=58.38;MQ0=2;MQRankSum=-15.913;QD=3.22;ReadPosRankSum=6.020;VQSLOD=0.0058;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,27:51:99:131,0,110	0/0:19,0:19:54.13:0,54,681	0/0:29,0:27:71.71:0,72,770	0/0:37,0:35:84.94:0,85,1036	0/0:28,0:27:78.10:0,78,917	0/0:30,0:30:81.26:0,81,1044	0/0:36,0:36:99:0,102,1279	0/1:39,11:50:19.27:125,0,19	0/0:31,0:31:64.36:0,64,937	0/0:35,0:35:99:0,102,1264	0/0:28,0:28:81.20:0,81,992	1/1:19,23:42:45.20:267,45,0	1/1:14,12:26:31.34:170,31,0	1/1:15,22:37:21.69:180,22,0	1/1:21,22:43:31.10:248,31,0	0/0:55,0:55:99:0,165,2062	0/1:13,10:21:38.62:56,0,39	0/0:16,4:19:1.11:0,1,88	0/1:18,6:23:3.09:78,0,3	0/1:21,14:35:27.46:87,0,27	0/1:46,12:55:83.50:83,0,160	0/1:13,9:22:16.57:69,0,17	0/1:9,5:13:46.71:47,0,48	0/1:22,12:33:70.80:83,0,71	0/0:28,0:28:78.24:0,78,996	0/1:30,17:47:13.93:167,0,14	1/1:10,8:18:4.22:69,4,0	0/1:5,7:12:8.59:64,0,9
chr10	109680362	.	TGG	T	10240.04	PASS	AB=0.953;AC=26;AF=0.464;AN=56;BaseQRankSum=11.169;DP=922;FS=5.713;HRun=2;HaplotypeScore=248.6992;InbreedingCoeff=0.4125;MQ=58.37;MQ0=2;MQRankSum=-13.119;QD=18.12;ReadPosRankSum=5.658;VQSLOD=2.7433;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:51,3:51:99:913,0,125	0/0:18,0:18:54.18:0,54,1053	0/0:28,0:27:73.85:0,74,1083	0/0:36,0:35:88.21:0,88,1423	0/0:28,0:27:78.20:0,78,1319	0/0:30,0:30:81.28:0,81,1574	0/0:36,0:36:99:0,108,1956	1/1:47,2:50:34.09:1123,34,0	0/0:30,0:30:78.22:0,78,1484	0/0:36,0:36:99:0,108,1918	0/0:28,0:28:84.20:0,84,1468	1/1:39,5:44:81.40:1058,81,0	1/1:27,1:27:39.55:558,40,0	1/1:28,9:37:36.74:683,37,0	1/1:38,6:44:67.33:993,67,0	0/0:56,0:56:99:0,169,3231	0/1:20,3:21:23.38:373,0,23	0/1:20,0:19:99:263,0,101	1/1:19,5:23:17.93:526,18,0	1/1:34,2:36:1.72:709,2,0	0/1:49,7:53:99:765,0,134	0/1:22,0:22:1.23:328,0,1	0/1:13,1:13:35.65:226,0,36	0/1:35,1:35:44.08:497,0,44	0/0:29,0:29:81.25:0,81,1541	1/1:42,5:47:6.17:760,6,0	1/1:13,5:18:13.84:372,14,0	0/1:12,0:12:13.54:93,0,14
chr10	109680364	.	G	GT	13021.77	PASS	AB=0.679;AC=33;AF=0.589;AN=56;BaseQRankSum=14.092;DP=925;FS=11.843;HRun=1;HaplotypeScore=237.7990;InbreedingCoeff=0.8966;MQ=58.72;MQ0=2;MQRankSum=-14.564;QD=22.73;ReadPosRankSum=2.667;VQSLOD=2.6911;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,34:51:21.17:1092,21,0	0/0:18,0:18:51.14:0,51,644	0/0:29,0:27:65.83:0,66,726	0/0:37,0:35:82.33:0,82,993	0/0:27,0:26:66.10:0,66,803	0/0:31,0:30:81.26:0,81,1049	0/0:33,0:33:99:0,99,1244	1/1:19,31:50:95.96:1296,96,0	0/0:30,0:30:80.98:0,81,976	0/0:35,0:35:99:0,102,1242	0/0:28,0:28:72.19:0,72,902	1/1:15,32:47:88.53:1375,89,0	1/1:5,23:27:45.34:699,45,0	1/1:13,23:36:44.79:913,45,0	1/1:18,28:46:97.87:1324,98,0	0/0:55,0:55:99:0,162,2056	1/1:13,13:24:4.09:446,4,0	0/1:10,9:18:65.06:284,0,65	1/1:16,10:25:43.13:596,43,0	1/1:14,22:36:42.19:900,42,0	1/1:31,25:53:12.17:763,12,0	1/1:7,13:20:16.91:496,17,0	1/1:8,8:15:33.04:381,33,0	1/1:16,21:36:15.24:685,15,0	0/0:29,0:29:81.22:0,81,1004	1/1:21,25:46:45.40:1044,45,0	1/1:8,10:18:18.81:448,19,0	1/1:4,8:12:29.07:281,29,0
chr10	109680367	.	G	GT	3155.20	PASS	AB=0.949;AC=18;AF=0.321;AN=56;BaseQRankSum=19.412;DP=912;FS=7.469;HRun=1;HaplotypeScore=270.3789;InbreedingCoeff=-0.3096;MQ=58.58;MQ0=2;MQRankSum=-18.644;QD=5.55;ReadPosRankSum=5.475;VQSLOD=0.3411;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:52,3:52:99:366,0,107	0/0:17,0:17:51.17:0,51,659	0/0:30,0:27:74.98:0,75,849	0/0:35,0:34:96.12:0,96,1098	0/0:23,0:22:58.97:0,59,711	0/0:31,0:30:84.06:0,84,1012	0/0:33,0:33:96.28:0,96,1214	0/1:43,5:48:99:327,0,323	0/0:31,0:31:84.20:0,84,1036	0/0:33,0:33:90.28:0,90,1140	0/0:26,0:26:72.06:0,72,866	0/1:43,2:45:99:271,0,132	0/1:28,0:27:35.09:118,0,35	0/1:37,0:38:82.25:168,0,82	0/1:45,2:47:99:233,0,264	0/0:55,0:55:99:0,162,2045	0/1:25,1:24:71.62:142,0,72	0/1:15,2:16:94.32:94,0,103	0/1:24,1:24:99:129,0,222	0/1:31,2:33:99:205,0,101	0/1:48,7:52:99:126,0,239	0/1:19,1:20:24.70:153,0,25	0/1:16,1:16:73.48:73,0,117	0/1:35,3:37:46.51:177,0,47	0/0:28,0:28:81.26:0,81,1048	0/1:44,3:47:99:433,0,155	0/1:18,0:18:50.62:51,0,59	1/1:11,1:12:31.25:256,31,0
chr10	109680584	.	G	GAT	32030.54	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=18.153;DP=1087;FS=3.783;HRun=0;HaplotypeScore=197.6831;InbreedingCoeff=1.0000;MQ=65.22;MQ0=5;MQRankSum=-3.952;QD=46.09;ReadPosRankSum=7.366;VQSLOD=4.5700;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,50:56:99:2444,133,0	0/0:21,0:21:51.17:0,51,809	0/0:34,0:29:80.02:0,80,1231	0/0:55,0:53:99:0,143,2059	0/0:32,0:31:81.07:0,81,1241	0/0:33,1:34:42.35:0,42,1388	0/0:28,0:28:75.23:0,75,1176	1/1:0,21:25:69.18:1187,69,0	0/0:44,0:44:99:0,129,2024	0/0:42,0:42:99:0,120,1829	0/0:20,0:20:60.20:0,60,953	1/1:1,45:47:99:2523,135,0	1/1:1,40:41:99:1907,105,0	1/1:1,47:48:99:2384,129,0	1/1:3,56:58:99:3118,169,0	0/0:59,0:59:99:0,175,2758	1/1:5,48:57:99:2435,136,0	1/1:4,38:41:91.01:1709,91,0	1/1:0,14:14:42.14:783,42,0	1/1:0,16:16:45.15:831,45,0	1/1:5,80:86:99:3242,180,0	1/1:0,31:31:87.30:1629,87,0	1/1:2,18:20:53.74:982,54,0	1/1:5,41:48:88.18:1636,88,0	0/0:23,0:23:63.20:0,63,1004	1/1:3,57:61:99:3218,178,0	1/1:0,25:25:72.25:1332,72,0	1/1:2,12:14:36.12:672,36,0
chr10	109684820	.	C	CTCTT	9071.98	PASS	AB=0.771;AC=42;AF=0.750;AN=56;BaseQRankSum=6.604;DP=568;FS=8.088;HRun=0;HaplotypeScore=112.2931;InbreedingCoeff=0.5557;MQ=62.10;MQ0=4;MQRankSum=-3.353;QD=19.10;ReadPosRankSum=-0.736;VQSLOD=3.4584;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,16:33:13.24:821,0,13	0/0:13,0:13:24.08:0,24,373	0/1:18,0:15:0:0,0,0	0/0:13,0:8:0.47:0,0,1	1/1:16,0:25:20.99:312,21,0	1/1:11,0:14:6.49:105,6,0	1/1:17,0:17:14.97:128,15,0	1/1:30,0:30:13.22:108,13,0	1/1:10,0:14:6.02:104,6,0	0/0:25,0:25:36.12:0,36,555	0/0:19,0:19:39.08:0,39,557	1/1:12,16:28:30.10:706,30,0	1/1:10,7:17:21.07:485,21,0	1/1:8,10:18:33.11:776,33,0	1/1:10,8:18:27.09:630,27,0	0/0:23,0:23:33.08:0,33,465	1/1:18,0:19:8.99:110,9,0	1/1:16,0:15:12.04:187,12,0	1/1:10,1:16:18.06:321,18,0	1/1:10,0:14:24.04:382,24,0	1/1:16,0:17:3.01:52,3,0	1/1:7,17:24:48.12:1016,48,0	1/1:14,10:24:24.08:558,24,0	0/1:15,10:25:7.43:738,0,7	1/1:19,1:30:27.09:487,27,0	0/1:14,0:25:51.36:471,0,51	1/1:11,0:20:27.09:471,27,0	1/1:6,0:10:6.02:104,6,0
chr10	109685763	.	TC	T	6750.95	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.606;DP=657;FS=0.000;HRun=1;HaplotypeScore=80.3825;InbreedingCoeff=0.9949;MQ=69.71;MQ0=0;MQRankSum=1.763;QD=38.80;ReadPosRankSum=2.546;VQSLOD=5.4598;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,2081	0/0:10,0:10:30.09:0,30,455	0/0:17,0:17:13.18:0,13,567	0/0:10,0:10:27.05:0,27,355	0/0:28,0:28:78.18:0,78,1176	0/0:26,0:26:78.25:0,78,1221	0/0:27,0:27:81.24:0,81,1246	0/0:24,0:24:69.21:0,69,1040	0/0:8,0:8:24.07:0,24,361	0/0:21,0:21:63.20:0,63,966	0/0:19,0:19:57.19:0,57,895	1/1:0,17:17:42.14:584,42,0	1/1:0,21:21:51.17:709,51,0	1/1:0,24:24:72.24:1000,72,0	1/1:0,33:33:99:1381,99,0	0/0:33,0:33:99:0,99,1580	0/0:30,0:30:90.27:0,90,1388	0/0:32,0:32:96.33:0,96,1530	0/0:19,0:19:54.18:0,54,834	0/0:26,0:26:78.25:0,78,1202	0/0:22,0:22:66.23:0,66,1055	1/1:0,18:18:48.12:648,48,0	1/1:0,22:22:66.22:919,66,0	1/1:0,39:39:99:1510,108,0	0/0:24,0:24:72.22:0,72,1103	0/0:25,0:25:75.22:0,75,1143	0/0:27,0:27:81.25:0,81,1240	0/0:10,0:10:30.05:0,30,427
chr10	109688239	.	A	AGGG	6140.64	PASS	AB=0.542;AC=43;AF=0.768;AN=56;BaseQRankSum=3.322;DP=457;FS=2.762;HRun=8;HaplotypeScore=95.0469;InbreedingCoeff=0.8606;MQ=84.77;MQ0=0;MQRankSum=-2.649;QD=16.60;ReadPosRankSum=-1.458;VQSLOD=1.8562;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,12:26:27.01:394,27,0	0/0:6,0:6:15.03:0,15,197	0/0:15,0:15:30.02:0,30,367	0/0:15,0:15:32.59:0,33,362	1/1:9,0:16:29.95:288,30,0	1/1:5,0:16:32.90:274,33,0	1/1:3,0:21:50.81:391,51,0	1/1:14,0:18:17.97:190,18,0	1/1:8,0:11:25.26:283,25,0	0/0:17,0:17:39.12:0,39,512	0/0:13,0:13:39.13:0,39,511	1/1:2,0:16:16.20:35,16,0	1/1:4,0:23:17.63:43,18,0	1/1:3,0:13:9.97:22,10,0	1/1:3,0:15:18.01:46,18,0	0/0:20,0:20:57.14:0,57,703	1/1:15,19:38:54.12:978,54,0	1/1:3,13:20:43.32:738,43,0	1/1:7,5:13:26.96:410,27,0	1/1:3,2:12:26.71:320,27,0	1/1:7,11:24:27.01:376,27,0	1/1:1,0:8:6.23:14,6,0	0/1:2,0:13:10.35:10,0,26	1/1:1,0:20:18.69:40,19,0	1/1:5,0:11:25.17:193,25,0	1/1:3,10:14:30.09:477,30,0	1/1:3,12:19:30.03:440,30,0	1/1:1,2:3:9.03:178,9,0
chr10	109688303	.	C	CAAA	2564.43	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-1.316;DP=408;FS=2.035;HRun=8;HaplotypeScore=77.0681;InbreedingCoeff=0.9498;MQ=83.25;MQ0=0;MQRankSum=-2.518;QD=30.53;ReadPosRankSum=-0.618;VQSLOD=2.1917;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:36.09:0,36,473	0/0:6,0:6:15.03:0,15,197	0/0:21,0:19:40.62:0,41,526	0/0:10,0:11:6.86:0,7,144	1/1:4,10:16:39.11:646,39,0	1/1:5,7:13:33.09:599,33,0	1/1:6,9:17:43.37:787,43,0	0/0:19,0:19:39.06:0,39,483	1/1:4,6:11:18.04:326,18,0	0/0:14,0:14:35.62:0,36,458	0/0:5,0:5:15.05:0,15,197	0/0:16,0:16:45.15:0,45,589	0/0:14,0:14:33.07:0,33,404	0/0:18,0:18:42.11:0,42,537	1/1:2,0:13:12.46:27,12,0	0/0:17,0:17:48.14:0,48,614	0/0:24,0:24:60.16:0,60,786	0/0:16,0:16:39.12:0,39,511	0/0:9,0:9:17.96:0,18,227	0/0:17,0:17:36.08:0,36,471	0/0:22,0:22:57.17:0,57,734	0/0:8,0:8:24.06:0,24,299	0/0:13,0:13:27.05:0,27,336	0/0:22,0:22:57.18:0,57,746	1/1:4,10:14:18.06:364,18,0	0/0:19,0:19:45.12:0,45,591	0/0:13,0:13:15.02:0,15,197	0/0:4,0:4:9.01:0,9,118
chr10	109690055	.	GTC	G	1192.03	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.167;DP=782;FS=2.757;HRun=0;HaplotypeScore=110.7213;InbreedingCoeff=0.9820;MQ=62.68;MQ0=7;MQRankSum=-7.397;QD=20.91;ReadPosRankSum=0.910;VQSLOD=4.1598;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,138,2258	0/0:9,0:9:21.06:0,21,328	0/0:33,0:16:24.97:0,25,280	0/0:37,0:28:49.08:0,49,662	1/1:11,1:12:15:148,15,0	1/1:7,1:8:15.05:190,15,0	1/1:5,3:8:18.06:232,18,0	0/0:36,0:35:93.27:0,93,1477	1/1:18,1:19:54.10:608,54,0	0/0:36,0:36:99:0,105,1766	0/0:19,0:19:45.12:0,45,717	0/0:42,0:42:99:0,114,1897	0/0:25,0:25:60.17:0,60,967	0/0:28,0:28:84.27:0,84,1417	0/0:28,0:28:84.25:0,84,1377	0/0:34,0:34:96.30:0,96,1593	0/0:31,1:32:13.37:0,13,1149	0/0:27,0:27:65.51:0,66,1016	0/0:38,0:35:84.22:0,84,1362	0/0:19,0:19:57.18:0,57,948	0/0:49,0:49:99:0,112,1986	0/0:23,0:23:63.20:0,63,1049	0/0:25,0:25:66.13:0,66,954	0/0:40,0:40:99:0,102,1654	1/1:9,1:10:17.92:186,18,0	0/0:39,0:39:99:0,108,1812	0/0:33,0:33:96.30:0,96,1589	0/0:16,0:16:48.09:0,48,741
chr10	109690061	.	CTCTG	C	1307.53	PASS	AB=0.750;AC=9;AF=0.161;AN=56;BaseQRankSum=10.151;DP=786;FS=5.158;HRun=0;HaplotypeScore=142.0045;InbreedingCoeff=0.8625;MQ=60.11;MQ0=7;MQRankSum=-8.862;QD=27.82;ReadPosRankSum=-2.173;VQSLOD=3.0699;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,141,3641	0/0:8,0:8:24.07:0,24,548	0/0:30,0:14:21.43:0,21,517	0/0:32,0:23:44.83:0,45,1024	1/1:5,2:7:15:202,15,0	1/1:1,4:5:14.94:165,15,0	1/1:3,5:8:17.95:193,18,0	0/0:37,0:36:99:0,105,2484	1/1:4,14:18:54.03:723,54,0	0/0:41,0:41:99:0,120,3020	0/0:19,0:19:50.88:0,51,1155	0/0:43,0:43:99:0,120,3078	0/0:24,0:24:69.17:0,69,1619	0/0:30,0:30:90.30:0,90,2345	0/0:32,0:32:93.27:0,93,2323	0/0:35,0:35:99:0,105,2671	0/0:29,1:30:32.49:0,32,1886	0/0:28,0:28:56.26:0,56,1653	0/0:35,0:32:93.27:0,93,2296	0/0:24,0:24:72.19:0,72,1659	0/0:48,0:48:99:0,118,3276	0/0:24,0:24:66.21:0,66,1695	0/0:26,0:26:72.17:0,72,1578	0/0:42,0:42:99:0,108,2651	0/1:6,3:9:12.65:186,0,13	0/0:40,0:40:99:0,117,2984	0/0:35,0:35:99:0,105,2591	0/0:19,0:19:53.65:0,54,1267
chr10	109690071	.	CTT	C	454.10	PASS	AB=0.556;AC=9;AF=0.161;AN=56;BaseQRankSum=7.960;DP=760;FS=4.251;HRun=3;HaplotypeScore=110.9053;InbreedingCoeff=0.7432;MQ=61.32;MQ0=5;MQRankSum=-6.674;QD=12.97;ReadPosRankSum=0.439;VQSLOD=0.4577;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,147,2565	0/0:11,0:11:33.11:0,33,594	0/0:33,0:19:49.39:0,49,741	0/0:37,0:23:49.94:0,50,772	1/1:1,2:3:4.52:78,5,0	1/1:1,4:5:3.33:71,3,0	1/1:1,5:6:3.80:65,4,0	0/0:40,0:39:99:0,114,2124	1/1:2,14:16:32.86:358,33,0	0/0:40,0:40:99:0,120,2231	0/0:19,0:19:57.09:0,57,950	0/0:39,0:39:99:0,111,2111	0/0:21,0:21:60.13:0,60,1118	0/0:30,0:30:87.28:0,87,1622	0/0:36,0:36:99:0,102,1871	0/0:35,0:35:99:0,105,1994	0/0:30,2:32:62.54:0,63,1586	0/0:28,0:28:74.96:0,75,1292	0/0:32,0:30:87.28:0,87,1580	0/0:23,0:23:66.18:0,66,1145	0/0:42,0:42:99:0,104,2155	0/0:20,0:20:60.20:0,60,1116	0/0:19,0:19:54.18:0,54,975	0/0:45,0:45:99:0,120,2249	0/1:1,3:5:11.10:22,0,11	0/0:37,0:37:99:0,111,2113	0/0:36,0:36:99:0,105,1930	0/0:19,0:19:53.95:0,54,1038
chr10	109690093	.	G	GTC	41.64	PASS	AB=0.917;AC=7;AF=0.130;AN=54;BaseQRankSum=6.682;DP=756;FS=20.402;HRun=0;HaplotypeScore=127.8102;InbreedingCoeff=0.8119;MQ=62.70;MQ0=10;MQRankSum=-5.562;QD=1.10;ReadPosRankSum=-2.795;VQSLOD=0.6380;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,1952	0/0:13,0:13:39.12:0,39,538	0/0:39,0:28:73:0,73,1001	0/0:49,0:31:58.42:0,58,697	1/1:8,0:8:4.61:22,5,0	0/1:10,1:11:0.47:16,0,0	1/1:6,0:6:3.06:8,3,0	0/0:35,0:35:96.31:0,96,1343	1/1:10,3:13:15.94:117,16,0	0/0:42,0:42:99:0,108,1516	0/0:18,0:18:54.07:0,54,693	0/0:39,0:39:99:0,108,1504	0/0:20,0:20:57.17:0,57,796	0/0:26,0:26:75.23:0,75,1052	0/0:35,0:35:99:0,99,1414	0/0:35,0:35:99:0,100,1443	0/0:36,0:36:99:0,99,1357	0/0:30,0:30:80.23:0,80,1083	0/0:22,0:19:54.17:0,54,757	0/0:23,0:23:69.20:0,69,949	0/0:37,0:37:98.78:0,99,1376	0/0:23,0:23:66.18:0,66,896	0/0:17,0:17:48.16:0,48,686	0/0:43,0:43:98.29:0,98,1552	./.	0/0:36,0:36:99:0,108,1526	0/0:31,0:31:90.28:0,90,1253	0/0:16,0:16:48.16:0,48,684
chr10	109690107	.	CTT	C	629.57	PASS	AB=0.600;AC=7;AF=0.130;AN=54;BaseQRankSum=7.435;DP=780;FS=10.249;HRun=3;HaplotypeScore=116.3817;InbreedingCoeff=0.7295;MQ=60.89;MQ0=12;MQRankSum=-3.626;QD=14.31;ReadPosRankSum=-2.321;VQSLOD=-0.4963;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,2263	0/0:12,0:12:36.11:0,36,664	0/0:37,0:19:41.34:0,41,708	0/0:58,0:30:38.51:0,39,753	1/1:2,9:11:4.81:170,5,0	1/1:1,10:11:6.52:213,7,0	1/1:0,10:10:9.03:137,9,0	0/0:38,0:38:99:0,111,2104	0/1:4,8:12:24.95:237,0,25	0/0:36,0:36:99:0,108,2033	0/0:18,0:18:51.17:0,51,973	0/0:31,0:31:90.28:0,90,1639	0/0:20,0:20:60.20:0,60,1124	0/0:25,0:25:69.23:0,69,1282	0/0:37,0:37:99:0,105,1889	0/0:33,0:33:91.12:0,91,1724	0/0:36,0:36:99:0,101,1867	0/0:32,0:32:80.31:0,80,1677	0/0:33,0:26:78.27:0,78,1493	0/0:26,0:26:78.25:0,78,1465	0/0:36,0:36:99:0,101,1885	0/0:25,0:25:75.26:0,75,1435	0/0:25,0:25:75.21:0,75,1371	0/0:44,0:44:99:0,106,2048	./.	0/0:34,0:34:99:0,102,1928	0/0:35,0:35:99:0,105,1946	0/0:17,0:17:51.17:0,51,963
chr10	109691099	.	TCC	T	2412.65	PASS	AB=0.752;AC=28;AF=0.500;AN=56;BaseQRankSum=-6.731;DP=402;FS=30.039;HRun=12;HaplotypeScore=60.2461;InbreedingCoeff=0.0457;MQ=77.56;MQ0=1;MQRankSum=-0.882;QD=7.29;ReadPosRankSum=6.652;VQSLOD=-0.3990;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:21:3.44:18,0,3	0/0:7,0:8:7.73:0,8,29	0/0:11,0:10:12.02:0,12,132	0/0:15,0:13:8.95:0,9,74	0/0:1,0:2:0:0,0,0	0/1:8,1:12:12.88:47,0,13	0/1:20,2:33:74.28:74,0,92	1/1:10,1:11:1.01:28,1,0	0/1:6,3:14:13.23:96,0,13	0/0:6,0:7:2.50:0,2,9	0/0:10,0:11:11.99:0,12,101	1/1:9,7:17:35.13:308,35,0	1/1:3,9:12:18.02:183,18,0	1/1:7,14:22:44.66:438,45,0	1/1:6,12:18:42.07:426,42,0	0/1:8,2:10:15.45:15,0,137	0/1:17,6:33:99:119,0,108	0/1:19,4:27:79.24:107,0,79	0/1:9,0:12:21.11:21,0,40	0/0:9,0:9:5.49:0,5,33	0/1:19,1:23:24.76:42,0,25	1/1:7,5:12:18.02:183,18,0	1/1:7,3:10:5.90:60,6,0	1/1:8,6:14:24.93:245,25,0	0/0:6,0:8:2.93:0,3,9	0/1:6,3:11:9.93:75,0,10	0/1:10,1:13:40.71:42,0,41	0/1:2,2:5:0.27:53,0,0
chr10	109697664	.	ACAG	A	2895.42	PASS	AB=0.756;AC=18;AF=0.321;AN=56;BaseQRankSum=6.137;DP=559;FS=27.306;HRun=0;HaplotypeScore=86.7338;InbreedingCoeff=0.4244;MQ=57.62;MQ0=12;MQRankSum=-1.396;QD=11.92;ReadPosRankSum=1.100;VQSLOD=1.3415;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,6:9:8.96:108,9,0	0/0:3,0:3:3.01:0,3,63	0/1:11,0:4:3.04:3,0,64	0/0:19,0:13:11.74:0,12,417	0/0:2,0:1:3.01:0,3,52	0/0:10,0:9:18.06:0,18,347	0/0:52,0:52:99:0,143,2565	1/1:6,9:12:24.07:334,24,0	0/0:27,0:27:60.20:0,60,1172	0/1:10,0:5:9.92:10,0,124	0/0:3,0:2:6.02:0,6,69	0/0:39,0:39:99:0,99,1845	0/0:29,0:29:84.25:0,84,1509	0/0:34,0:34:78.23:0,78,1454	0/0:22,0:22:59.87:0,60,1116	0/0:17,0:17:45.11:0,45,779	1/1:6,21:27:30.10:452,30,0	0/1:6,29:35:6.66:393,0,7	0/1:4,6:7:8.66:207,0,9	0/1:4,4:6:26.79:56,0,27	1/1:27,42:64:36.89:544,37,0	0/0:4,0:2:3.01:0,3,53	0/0:2,0:2:3.01:0,3,36	0/0:47,0:47:99:0,120,2215	0/0:6,0:4:3.01:0,3,53	0/1:12,9:19:60.78:259,0,61	1/1:1,14:15:27.09:405,27,0	1/1:0,11:11:21.07:308,21,0
chr10	109698903	.	CAG	C	228.81	PASS	AB=0.844;AC=10;AF=0.179;AN=56;BaseQRankSum=9.747;DP=545;FS=0.000;HRun=0;HaplotypeScore=181.0315;InbreedingCoeff=-0.2113;MQ=51.84;MQ0=5;MQRankSum=-7.136;QD=1.26;ReadPosRankSum=9.688;VQSLOD=1.3820;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,6:35:74.34:89,0,74	0/0:7,0:7:18.04:0,18,277	0/0:28,0:20:60.20:0,60,958	0/0:27,0:20:48.53:0,49,765	0/0:14,0:14:11.99:0,12,149	0/0:17,0:17:15.05:0,15,262	0/0:26,0:26:27.35:0,27,326	0/0:23,0:20:49.92:0,50,350	0/0:30,0:30:38.87:0,39,624	0/0:18,0:18:54.05:0,54,950	0/0:12,0:12:33.11:0,33,601	0/0:25,0:25:13.05:0,13,367	0/1:26,0:26:7.48:7,0,305	0/0:31,0:32:15.74:0,16,450	0/0:29,0:29:8.57:0,9,175	0/0:26,0:26:75.24:0,75,1419	0/1:7,4:11:22.86:23,0,31	0/0:11,0:11:16.18:0,16,162	0/1:10,2:11:29.96:30,0,146	0/1:6,1:7:9.95:10,0,49	0/0:25,1:25:5.59:0,6,42	0/0:5,0:5:2.03:0,2,31	0/1:11,0:11:1.45:1,0,13	0/1:30,0:30:3.36:3,0,191	0/0:8,0:8:11.97:0,12,163	0/1:11,8:19:79.15:79,0,144	0/1:9,9:18:72.17:88,0,72	0/1:8,4:11:30.42:30,0,64
chr10	109698906	.	TCA	T	252.06	PASS	AB=0.857;AC=10;AF=0.179;AN=56;BaseQRankSum=9.265;DP=544;FS=0.960;HRun=0;HaplotypeScore=181.5777;InbreedingCoeff=-0.2488;MQ=50.46;MQ0=10;MQRankSum=-6.718;QD=1.25;ReadPosRankSum=9.239;VQSLOD=1.4686;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,6:35:70.23:88,0,70	0/0:7,0:7:18.06:0,18,298	0/0:29,0:18:51.17:0,51,819	0/0:27,0:18:42.54:0,43,685	0/0:14,0:14:8.92:0,9,72	0/0:16,0:16:15.05:0,15,184	0/0:24,0:24:24.10:0,24,219	0/0:23,0:20:49.82:0,50,344	0/0:31,0:31:39.67:0,40,414	0/0:22,0:22:63.08:0,63,1079	0/0:13,0:13:33.11:0,33,600	0/0:25,0:25:3.05:0,3,333	0/1:25,0:25:22.94:23,0,191	0/0:32,0:32:4.15:0,4,408	0/1:27,0:27:5.89:6,0,49	0/0:27,0:27:78.27:0,78,1481	0/1:7,4:11:22.87:23,0,31	0/0:9,0:9:13.27:0,13,133	0/1:11,2:11:30.03:30,0,162	0/0:5,1:6:8.03:0,8,60	0/0:25,1:25:2.63:0,3,21	0/0:5,0:5:0.21:0,0,26	0/1:11,0:11:3.29:3,0,13	0/1:30,0:30:12.71:13,0,177	0/0:7,0:7:5.40:0,5,53	0/1:11,8:19:84.82:85,0,128	0/1:10,9:19:84.90:85,0,97	0/1:7,4:10:30.60:31,0,64
chr10	109698907	.	CAG	C	1115.34	PASS	AB=0.901;AC=18;AF=0.321;AN=56;BaseQRankSum=6.759;DP=537;FS=10.409;HRun=0;HaplotypeScore=176.0349;InbreedingCoeff=-0.1540;MQ=49.05;MQ0=12;MQRankSum=-4.300;QD=3.67;ReadPosRankSum=6.776;VQSLOD=1.1799;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:52.01:93,0,52	0/0:7,0:7:18.06:0,18,298	0/0:27,0:17:48.16:0,48,772	0/0:28,0:17:39.57:0,40,653	0/1:14,0:14:13.79:20,0,14	0/0:16,0:16:15.01:0,15,164	0/0:23,0:23:7.91:0,8,124	0/0:23,0:20:1.04:0,1,280	0/0:31,0:31:39.90:0,40,365	0/0:21,0:21:63.08:0,63,1081	0/0:13,0:13:33.10:0,33,583	0/1:16,9:25:99:135,0,247	0/1:15,9:24:90.96:221,0,91	0/1:22,11:33:99:158,0,326	0/1:24,4:28:1.08:105,0,1	0/0:28,0:28:81.26:0,81,1506	0/1:11,0:11:23.91:24,0,31	0/0:9,0:9:16.11:0,16,145	0/1:10,0:8:42.70:43,0,97	0/0:6,0:6:8.01:0,8,56	1/1:24,0:23:2.76:20,3,0	1/1:3,2:5:6.77:35,7,0	0/1:8,3:11:3.68:32,0,4	0/1:19,10:29:99:152,0,155	0/1:7,0:7:15.92:16,0,30	0/1:18,0:18:99:102,0,134	0/1:19,0:19:85.73:86,0,98	0/1:11,0:10:33.50:34,0,62
chr10	109698910	.	TCA	T	1019.02	PASS	AB=0.885;AC=16;AF=0.286;AN=56;BaseQRankSum=6.867;DP=539;FS=11.827;HRun=0;HaplotypeScore=177.7379;InbreedingCoeff=-0.0751;MQ=47.47;MQ0=17;MQRankSum=-3.115;QD=3.73;ReadPosRankSum=7.704;VQSLOD=1.2159;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:35:61.64:90,0,62	0/0:9,0:9:24.08:0,24,386	0/0:31,0:16:45.15:0,45,750	0/0:28,0:15:33.55:0,34,596	1/1:12,0:12:0.47:1,0,0	0/0:16,0:16:14.99:0,15,162	0/0:23,0:23:8.02:0,8,125	0/0:22,0:19:52.92:0,53,359	0/0:30,0:30:12.79:0,13,315	0/0:20,0:20:60.07:0,60,1037	0/0:12,0:12:30.09:0,30,538	0/1:17,9:26:99:138,0,294	0/1:14,9:23:86.44:224,0,86	0/1:23,11:34:99:150,0,405	0/1:23,4:27:0.05:83,0,0	0/0:27,0:27:78.27:0,78,1482	0/1:12,0:12:23.93:24,0,31	0/0:9,0:9:13.19:0,13,135	0/1:9,0:6:40.92:41,0,94	0/0:6,0:6:5.51:0,6,37	0/0:27,0:26:0.10:0,0,1	1/1:3,2:5:6.77:35,7,0	0/1:8,3:11:3.42:32,0,3	0/1:20,10:30:99:152,0,155	0/0:6,0:6:1.22:0,1,35	0/1:18,0:18:80.12:80,0,138	0/1:19,0:19:85.72:86,0,98	0/1:11,0:10:33.52:34,0,59
chr10	109698930	.	TCTACCTAC	T	2176.92	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=2.001;DP=589;FS=4.813;HRun=0;HaplotypeScore=206.5821;InbreedingCoeff=0.7778;MQ=39.93;MQ0=20;MQRankSum=0.461;QD=21.55;ReadPosRankSum=5.495;VQSLOD=2.8290;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:40:30.28:0,30,383	0/0:10,0:10:27.09:0,27,994	0/0:31,0:6:1.82:0,2,5	0/0:31,0:10:6.02:0,6,151	0/0:10,0:10:0:0,0,0	0/0:20,0:19:17.97:0,18,268	0/0:21,0:21:11.45:0,11,112	0/0:38,0:37:81.08:0,81,1769	0/0:34,0:34:29.96:0,30,550	0/0:27,0:27:67.10:0,67,2024	0/0:10,0:10:23.99:0,24,450	1/1:22,3:25:39.10:626,39,0	1/1:20,2:22:26.97:415,27,0	1/1:22,6:28:57.01:1021,57,0	./.	0/0:32,0:32:75.25:0,75,2556	0/0:18,0:18:28.86:0,29,804	0/0:13,0:13:30.05:0,30,751	0/0:18,0:15:30.09:0,30,593	0/0:7,0:7:17.50:0,18,298	0/0:32,0:31:6.02:0,6,142	./.	0/0:7,3:10:0.89:0,1,2	1/1:26,0:26:11.29:263,11,0	0/0:8,0:8:3.01:0,3,40	0/0:22,0:22:53.85:0,54,1434	0/0:19,0:19:25.86:0,26,682	0/0:8,0:8:15.05:0,15,420
chr10	109698958	.	C	CCTACCTAT	2808.46	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=5.427;DP=669;FS=5.489;HRun=0;HaplotypeScore=205.1239;InbreedingCoeff=0.2220;MQ=50.70;MQ0=9;MQRankSum=-8.470;QD=8.31;ReadPosRankSum=1.560;VQSLOD=1.8999;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:52,0:51:3.61:4,0,477	0/0:12,0:12:32.95:0,33,675	0/0:33,0:18:32.60:0,33,337	0/0:32,0:15:35.14:0,35,390	1/1:3,16:21:17.65:108,18,0	1/1:2,13:17:13.22:247,13,0	1/1:2,20:30:3.01:76,3,0	0/1:45,0:45:99:264,0,312	1/1:1,25:32:17.99:451,18,0	0/0:32,0:32:87.07:0,87,1385	0/0:16,0:16:41.70:0,42,407	0/0:27,0:27:65.99:0,66,1191	0/0:18,0:18:41.83:0,42,675	0/0:30,0:30:72.08:0,72,1578	0/0:26,0:26:23.97:0,24,201	0/0:33,0:33:96.10:0,96,1607	0/1:24,0:24:99:282,0,216	0/1:14,0:14:51.50:374,0,51	0/1:21,0:19:99:312,0,132	0/1:12,0:12:36.62:37,0,113	0/0:32,0:31:18.78:0,19,248	0/0:9,0:9:14.89:0,15,116	0/0:11,0:11:17.95:0,18,148	0/0:20,0:20:41.82:0,42,607	1/1:1,12:13:2.97:20,3,0	0/1:33,0:33:99:318,0,463	0/1:17,0:17:99:292,0,125	0/1:6,0:6:26:203,0,26
chr10	109698961	.	A	ACC	190.42	PASS	AB=0.891;AC=10;AF=0.179;AN=56;BaseQRankSum=6.997;DP=647;FS=1.365;HRun=0;HaplotypeScore=151.2268;InbreedingCoeff=-0.0613;MQ=52.75;MQ0=3;MQRankSum=-5.489;QD=1.08;ReadPosRankSum=-0.502;VQSLOD=2.5205;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,3:42:77.04:0,77,619	0/0:12,0:12:36.12:0,36,583	0/0:30,0:19:51.15:0,51,784	0/0:30,0:15:45.12:0,45,684	0/1:20,0:20:15.78:16,0,252	0/0:19,0:18:8.88:0,9,102	0/0:26,0:26:2.98:0,3,22	0/0:45,0:45:99:0,105,698	0/1:29,0:29:30.23:30,0,69	0/0:30,0:30:87.28:0,87,1382	0/0:15,0:15:45.15:0,45,725	0/0:27,0:27:69.22:0,69,1048	0/0:19,0:19:42.13:0,42,612	0/0:33,0:33:83.76:0,84,1195	0/0:27,0:27:30.09:0,30,460	0/0:33,0:33:96.31:0,96,1534	0/1:22,2:24:12.68:13,0,260	0/1:13,3:16:35.73:36,0,158	0/1:17,3:18:67.71:68,0,140	0/0:13,0:13:10.02:0,10,155	0/0:30,0:29:39.96:0,40,289	0/0:9,0:9:18.06:0,18,289	0/0:10,0:10:21.07:0,21,338	0/0:20,0:20:41.44:0,41,654	1/1:13,0:13:2.97:20,3,0	0/1:31,2:33:33.83:34,0,442	0/1:12,3:16:46.30:46,0,178	0/1:4,2:6:43.88:69,0,44
chr10	109698962	.	T	TACCTACCTAC	3723.82	PASS	AB=0.928;AC=13;AF=0.241;AN=54;BaseQRankSum=1.162;DP=645;FS=2.940;HRun=0;HaplotypeScore=217.1619;InbreedingCoeff=-0.0137;MQ=53.78;MQ0=3;MQRankSum=-3.703;QD=13.54;ReadPosRankSum=-4.505;VQSLOD=1.8711;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,3:43:99:230,0,271	0/0:12,0:12:36.07:0,36,1016	0/0:30,0:20:53.81:0,54,1135	0/0:30,0:15:45.07:0,45,929	0/0:20,0:20:20.57:0,21,330	0/0:19,0:18:0.79:0,1,124	0/0:26,0:26:4.55:0,5,28	0/1:45,0:45:99:297,0,157	0/1:29,0:29:53.82:102,0,54	0/0:29,0:29:84.19:0,84,2257	0/0:15,0:15:45.09:0,45,994	0/0:27,0:27:69.21:0,69,1858	0/0:18,0:18:42.04:0,42,1009	0/0:33,0:33:84.11:0,84,2283	0/0:27,0:27:30.02:0,30,421	0/0:32,0:32:93.31:0,93,2654	0/1:22,2:24:99:506,0,168	1/1:13,3:16:1.96:619,2,0	1/1:16,3:17:14.08:611,14,0	0/1:14,0:14:60.60:61,0,79	0/1:30,0:29:90.19:90,0,120	0/0:9,0:9:17.93:0,18,290	0/0:10,0:10:20.96:0,21,317	0/0:19,0:19:41.86:0,42,983	./.	0/1:31,2:33:99:574,0,290	0/1:12,3:16:99:367,0,149	0/1:4,1:6:30.03:267,0,30
chr10	109722976	.	G	GA	2458.33	PASS	AB=0.577;AC=9;AF=0.161;AN=56;BaseQRankSum=-9.209;DP=587;FS=16.318;HRun=9;HaplotypeScore=64.2889;InbreedingCoeff=0.8715;MQ=78.37;MQ0=0;MQRankSum=-1.952;QD=21.56;ReadPosRankSum=-0.661;VQSLOD=2.4299;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:89.89:0,90,770	0/0:11,0:11:32.99:0,33,287	0/0:21,0:21:18.38:0,18,198	0/0:11,0:11:20.90:0,21,172	1/1:6,25:32:48.91:725,49,0	1/1:5,18:23:48.13:531,48,0	1/1:4,17:21:45.12:498,45,0	0/0:30,0:30:74.94:0,75,644	1/1:3,20:23:54.14:593,54,0	0/0:19,0:19:47.95:0,48,410	0/0:14,0:14:26.96:0,27,231	0/0:21,0:21:53.98:0,54,469	0/0:21,0:21:56.98:0,57,495	0/0:29,0:29:53.67:0,54,627	0/0:24,0:24:65.97:0,66,569	0/0:21,0:22:65.01:0,65,549	0/0:23,0:23:65.98:0,66,573	0/0:19,0:19:53.99:0,54,469	0/0:20,0:20:47.97:0,48,417	0/0:16,0:16:41.99:0,42,365	0/0:35,0:35:92.97:0,93,807	0/0:15,0:15:35.99:0,36,313	0/0:19,0:19:44.96:0,45,390	0/0:9,0:9:20.98:0,21,182	0/1:4,10:15:11.36:277,0,11	0/0:31,0:31:74.98:0,75,651	0/0:22,0:22:56.97:0,57,495	0/0:6,0:6:18:0,18,156
chr10	109727764	.	CCACACACACA	C	1836.40	PASS	AB=0.964;AC=25;AF=0.446;AN=56;BaseQRankSum=2.560;DP=506;FS=0.795;HRun=0;HaplotypeScore=158.7528;InbreedingCoeff=0.0057;MQ=56.57;MQ0=31;MQRankSum=2.934;QD=5.62;ReadPosRankSum=4.303;VQSLOD=2.6422;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:29:99:128,0,249	0/0:5,0:5:12.01:0,12,284	0/0:33,0:15:6.47:0,6,55	0/0:33,0:14:11.96:0,12,106	1/1:8,4:13:6.13:110,6,0	1/1:11,4:15:12:218,12,0	1/1:12,8:19:3.44:21,3,0	0/1:24,0:22:21.63:30,0,22	0/0:12,4:17:1.82:0,2,5	0/0:24,0:23:40.36:0,40,1043	0/0:4,0:4:6.02:0,6,138	0/1:14,0:15:11.86:12,0,73	1/1:7,0:7:0.88:2,1,0	0/1:17,0:17:52.54:53,0,133	0/1:12,0:13:15.20:15,0,139	0/0:21,0:21:32.71:0,33,1108	0/1:25,0:22:99:172,0,233	0/1:20,0:21:18.21:270,0,18	1/1:11,0:11:6.02:111,6,0	0/1:9,0:8:43.07:113,0,43	0/1:36,0:34:99:299,0,194	0/0:13,0:13:12.22:0,12,78	0/0:9,0:13:3.48:0,3,55	0/1:22,0:24:1.82:86,0,2	1/1:5,4:11:0.47:1,0,0	0/1:21,0:19:40.73:297,0,41	0/0:9,0:14:5.94:0,6,43	1/1:10,0:9:3.01:59,3,0
chr10	109731349	.	C	CAAT	17427.30	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-14.904;DP=615;FS=2.260;HRun=0;HaplotypeScore=82.4876;InbreedingCoeff=0.9852;MQ=94.23;MQ0=0;MQRankSum=-4.900;QD=52.02;ReadPosRankSum=1.150;VQSLOD=6.7830;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,48:53:99:2639,120,0	0/0:3,0:3:9.03:0,9,147	0/0:34,0:34:84.01:0,84,1291	0/0:24,0:24:60.16:0,60,895	1/1:1,10:11:18.06:402,18,0	1/1:0,10:11:24.08:536,24,0	1/1:0,19:19:57.19:1229,57,0	1/1:8,23:32:78.25:1696,78,0	1/1:4,15:19:33.11:736,33,0	0/0:16,0:16:42.14:0,42,685	0/0:6,0:6:18.06:0,18,294	0/0:23,0:23:63.20:0,63,1005	0/0:20,0:20:57.18:0,57,907	0/0:16,0:16:48.15:0,48,757	0/0:34,0:34:93.29:0,93,1471	0/0:30,0:30:90.31:0,90,1467	1/1:3,35:38:99:2196,99,0	1/1:4,20:23:66.23:1444,66,0	1/1:2,20:24:69.16:1368,69,0	1/1:0,15:16:42.14:909,42,0	1/1:2,27:31:72.03:1525,72,0	0/0:17,0:17:48.11:0,48,731	0/0:17,0:17:39.13:0,39,623	0/0:40,0:40:99:0,111,1784	1/1:2,13:15:39.13:812,39,0	1/1:2,14:16:39.12:828,39,0	1/1:3,14:18:39.13:839,39,0	1/1:0,8:8:12.04:268,12,0
chr10	109731933	.	G	GA	2468.10	PASS	AB=0.856;AC=23;AF=0.411;AN=56;BaseQRankSum=-3.422;DP=438;FS=0.542;HRun=13;HaplotypeScore=92.9142;InbreedingCoeff=0.2590;MQ=57.70;MQ0=6;MQRankSum=-0.624;QD=9.11;ReadPosRankSum=-2.452;VQSLOD=2.4891;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,13:36:31.31:369,31,0	0/0:3,0:4:4.94:0,5,24	0/0:37,0:16:4.05:0,4,23	0/0:24,0:12:8.05:0,8,57	1/1:13,3:16:17.97:159,18,0	0/1:11,3:15:9.39:74,0,9	1/1:8,9:18:13.21:175,13,0	0/1:15,6:22:1.40:215,0,1	0/1:5,1:6:10.48:45,0,10	0/0:8,0:9:7.92:0,8,47	0/1:5,1:6:16.69:17,0,49	0/0:7,0:15:8.97:0,9,29	0/0:2,0:7:6.10:0,6,18	0/0:8,0:17:0.79:0,1,33	0/0:3,0:7:3.93:0,4,12	0/0:16,0:16:21.73:0,22,161	1/1:11,5:17:2.45:181,2,0	1/1:15,15:29:62.99:561,63,0	1/1:18,3:21:26.69:228,27,0	0/1:10,3:13:5.73:80,0,6	0/1:12,3:14:2.60:110,0,3	0/0:6,0:11:11.93:0,12,35	0/0:2,0:4:3.79:0,4,11	0/0:3,0:13:15.72:0,16,56	0/1:12,3:15:11.20:147,0,11	1/1:7,4:12:24.28:198,24,0	0/1:20,1:21:40.11:66,0,40	0/1:4,0:4:14.56:22,0,15
chr10	109731980	.	ACGGCC	A	11575.03	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=7.583;DP=324;FS=13.812;HRun=0;HaplotypeScore=77.5441;InbreedingCoeff=0.9147;MQ=68.61;MQ0=1;MQRankSum=-7.841;QD=43.68;ReadPosRankSum=3.263;VQSLOD=3.8640;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:20:48.03:851,48,0	0/0:4,0:4:12.04:0,12,348	0/0:11,0:11:12.04:0,12,339	0/0:12,0:8:15.02:0,15,382	1/1:4,8:12:30.10:607,30,0	1/1:3,7:10:21.07:426,21,0	1/1:2,15:17:45.11:872,45,0	1/1:7,15:22:45.15:898,45,0	1/1:1,6:7:18.06:365,18,0	0/0:13,0:13:39.13:0,39,1124	0/0:3,0:3:9.03:0,9,272	1/1:1,10:11:30.10:609,30,0	1/1:0,10:9:24.08:487,24,0	1/1:2,6:8:21.07:426,21,0	1/1:1,9:10:24.08:487,24,0	0/0:16,0:16:45.15:0,45,1364	1/1:1,13:14:36.12:731,36,0	1/1:6,14:19:36.12:731,36,0	1/1:4,13:17:39.13:780,39,0	1/1:3,4:7:15.05:302,15,0	1/1:2,19:20:35.17:729,35,0	1/1:2,3:5:6.02:122,6,0	1/1:2,5:7:12.04:243,12,0	1/1:5,13:18:24.07:487,24,0	1/1:0,7:7:21.07:426,21,0	1/1:2,2:4:6.02:122,6,0	1/1:2,9:11:27.05:507,27,0	1/1:0,6:6:18.06:365,18,0
chr10	109734210	.	T	TACACACACACACACAC	983.99	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=0.270;DP=599;FS=3.651;HRun=0;HaplotypeScore=261.0871;InbreedingCoeff=0.4056;MQ=59.67;MQ0=26;MQRankSum=-4.258;QD=4.58;ReadPosRankSum=-4.920;VQSLOD=1.3060;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:38.62:0,39,1143	0/1:9,0:9:13.06:13,0,189	0/0:18,0:10:3.01:0,3,89	0/0:26,0:21:9.03:0,9,285	0/1:15,0:14:0:0,0,0	1/1:16,0:15:2.41:73,2,0	1/1:28,0:26:20.58:429,21,0	0/0:25,0:23:12.44:0,12,463	1/1:20,3:22:9.40:182,9,0	0/0:23,0:23:10.39:0,10,1121	0/1:14,0:13:10.91:11,0,319	0/0:16,0:16:18.05:0,18,500	0/0:16,0:16:30.10:0,30,960	0/0:15,0:14:21.53:0,22,597	0/0:20,0:19:4.75:0,5,753	0/0:22,0:22:25.79:0,26,850	0/1:26,0:25:18.82:19,0,1014	0/0:19,0:18:19.03:0,19,878	0/1:20,0:19:27.37:27,0,597	0/0:16,0:15:20.69:0,21,592	0/1:42,0:38:0.39:0,0,958	0/0:20,0:18:24.08:0,24,778	0/0:15,0:12:12.97:0,13,310	0/0:38,0:37:55.10:0,55,1775	1/1:21,0:20:15.03:386,15,0	0/0:28,0:24:35.42:0,35,1054	0/0:18,0:16:16.63:0,17,495	0/0:19,0:16:21.11:0,21,644
chr10	109734239	.	ACTCTCT	A	621.48	PASS	AB=0.872;AC=16;AF=0.320;AN=50;BaseQRankSum=-2.013;DP=632;FS=18.604;HRun=0;HaplotypeScore=154.3765;InbreedingCoeff=0.4832;MQ=43.61;MQ0=70;MQRankSum=3.182;QD=2.80;ReadPosRankSum=-0.750;VQSLOD=0.8962;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:12.04:0,12,259	0/0:7,0:6:9.03:0,9,181	./.	./.	0/1:17,0:16:0:0,0,0	1/1:21,0:19:5.80:71,6,0	1/1:29,0:26:5.48:93,5,0	0/0:36,0:31:1.55:0,2,4	0/1:22,0:20:21.87:22,0,62	0/0:32,0:28:20.97:0,21,275	0/0:12,0:10:2.90:0,3,16	0/0:16,5:16:2.94:0,3,48	1/1:20,2:20:5.83:111,6,0	./.	0/1:17,8:21:0:0,0,0	0/0:21,0:21:8.52:0,9,76	0/0:32,0:29:27.56:0,28,640	0/0:21,0:20:9:0,9,154	0/0:25,0:21:6.02:0,6,148	0/0:24,0:21:0.09:0,0,0	0/0:36,0:29:3.01:0,3,30	0/1:12,7:17:0:0,0,0	1/1:18,0:16:6.02:106,6,0	1/1:35,0:33:13.39:288,13,0	1/1:13,0:12:5.75:71,6,0	0/0:35,0:29:19.42:0,19,461	0/0:15,0:12:3.01:0,3,75	0/0:35,0:25:3.01:0,3,63
chr10	109737425	.	AT	A	3808.73	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=0.683;DP=267;FS=2.428;HRun=11;HaplotypeScore=44.1014;InbreedingCoeff=0.8731;MQ=80.76;MQ0=0;MQRankSum=-3.903;QD=18.22;ReadPosRankSum=2.730;VQSLOD=4.5730;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,7:8:17.98:148,18,0	0/0:7,0:7:21.05:0,21,224	0/0:19,0:17:14.47:0,14,100	0/0:7,0:6:1.98:0,2,19	1/1:4,8:13:25.98:203,26,0	1/1:0,7:7:20.98:172,21,0	1/1:5,8:13:20.91:166,21,0	1/1:7,11:18:29.93:243,30,0	1/1:0,7:7:20.94:166,21,0	0/0:4,0:4:12.03:0,12,128	0/0:13,0:13:15.38:0,15,325	1/1:1,5:6:14.98:123,15,0	1/1:1,7:8:20.98:172,21,0	1/1:0,4:4:11.99:98,12,0	1/1:1,10:11:29.96:246,30,0	0/0:8,0:8:18:0,18,180	1/1:4,5:9:14.97:123,15,0	1/1:1,9:10:20.97:172,21,0	1/1:7,10:17:26.93:222,27,0	1/1:4,5:9:17.69:144,18,0	1/1:0,3:4:11.03:80,11,0	1/1:1,4:5:11.98:98,12,0	1/1:3,9:12:23.95:197,24,0	1/1:0,1:1:3:25,3,0	1/1:2,13:15:35.94:295,36,0	1/1:0,11:11:32.96:271,33,0	1/1:1,8:9:23.97:197,24,0	1/1:2,10:12:29.95:246,30,0
chr10	109737466	.	C	CAAAA	4585.52	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=-3.687;DP=422;FS=22.464;HRun=14;HaplotypeScore=115.3583;InbreedingCoeff=0.7479;MQ=77.41;MQ0=8;MQRankSum=-1.584;QD=19.03;ReadPosRankSum=-5.122;VQSLOD=0.0781;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:14,1:15:30.38:348,30,0	0/1:7,0:7:12.22:12,0,105	0/0:46,0:19:16.77:0,17,188	0/0:38,0:21:5.11:0,5,134	1/1:15,0:19:6.11:285,6,0	1/1:4,0:7:14.77:102,15,0	1/1:8,0:10:23.71:172,24,0	1/1:12,1:10:18.42:206,18,0	1/1:5,0:9:0.02:84,0,0	0/0:19,0:20:42.92:0,43,495	0/0:11,0:15:11.54:0,12,240	0/0:6,0:6:2.69:0,3,22	0/0:9,0:8:14.76:0,15,108	0/0:7,0:7:9.66:0,10,69	0/0:14,0:14:26.59:0,27,201	0/1:16,0:16:1.08:1,0,294	1/1:10,1:14:27.37:316,27,0	1/1:10,0:12:21.46:259,21,0	1/1:14,3:17:41.99:558,42,0	1/1:18,1:18:35.94:460,36,0	1/1:3,0:3:8.99:97,9,0	0/0:6,0:6:8.77:0,9,67	0/0:12,0:12:9.09:0,9,66	0/0:7,0:7:12.33:0,12,86	1/1:15,0:18:38.74:348,39,0	1/1:19,1:19:39.01:470,39,0	1/1:3,13:18:20.78:365,21,0	1/1:20,1:20:36.01:502,36,0
chr10	109737473	.	AAAAAAAAC	A	2158.48	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=1.573;DP=453;FS=56.957;HRun=0;HaplotypeScore=140.6083;InbreedingCoeff=0.9355;MQ=76.84;MQ0=8;MQRankSum=-6.196;QD=33.73;ReadPosRankSum=5.390;VQSLOD=0.8664;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:44.11:0,44,1006	0/0:7,0:7:21.07:0,21,723	0/0:47,0:18:42.03:0,42,784	0/0:39,0:22:42.81:0,43,618	0/0:23,0:23:63.22:0,63,1842	0/0:10,0:10:27.09:0,27,740	0/0:10,0:10:27.09:0,27,780	0/0:18,0:15:36.12:0,36,898	0/0:10,0:10:27.09:0,27,798	0/0:22,0:22:66.22:0,66,2416	0/0:16,0:16:48.16:0,48,1445	1/1:5,1:6:2.82:74,3,0	1/1:2,9:10:14.99:371,15,0	1/1:4,4:8:14.95:318,15,0	1/1:4,9:13:26.97:667,27,0	0/0:16,0:16:48.16:0,48,1645	0/0:14,0:14:36.59:0,37,1083	0/0:15,0:15:39.12:0,39,937	0/0:22,0:21:57.20:0,57,1727	0/0:24,0:23:60.19:0,60,1607	0/0:3,0:3:9.03:0,9,262	1/1:3,6:9:14.86:262,15,0	1/1:5,5:10:11.91:289,12,0	1/1:2,5:7:15.02:364,15,0	0/0:17,0:16:48.16:0,48,1332	0/0:19,0:18:51.16:0,51,1423	0/0:17,0:16:20.14:0,20,726	0/0:24,0:23:63.19:0,63,1543
chr10	109737600	.	TTGTG	T	9197.38	PASS	AB=0.581;AC=29;AF=0.518;AN=56;BaseQRankSum=-4.477;DP=706;FS=6.186;HRun=0;HaplotypeScore=136.2116;InbreedingCoeff=0.6111;MQ=67.10;MQ0=10;MQRankSum=0.446;QD=24.33;ReadPosRankSum=1.897;VQSLOD=4.1170;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,18:31:32.90:545,33,0	0/0:10,0:11:14.79:0,15,298	0/0:61,0:30:27.09:0,27,618	0/0:44,0:22:41.58:0,42,726	1/1:5,7:15:15.01:219,15,0	1/1:2,14:16:33.11:545,33,0	1/1:5,13:20:45.14:700,45,0	0/1:12,13:25:10.57:549,0,11	0/1:3,15:18:31.36:602,0,31	0/0:21,0:21:51.17:0,51,1198	0/0:26,0:26:63.20:0,63,1447	0/0:4,0:25:54.89:0,55,248	0/0:1,0:21:43.25:0,43,215	0/1:6,2:25:48.76:49,0,162	0/0:9,1:32:8.87:0,9,198	0/0:31,0:32:28.48:0,28,1628	1/1:11,21:34:63.20:997,63,0	0/1:6,16:23:18.13:766,0,18	1/1:5,10:16:30.07:440,30,0	1/1:5,14:21:32.49:471,32,0	1/1:13,19:32:34.38:592,34,0	0/0:5,0:20:35.68:0,36,161	0/1:3,1:14:24.57:25,0,74	0/0:10,1:34:2.88:0,3,173	1/1:4,20:25:41.71:659,42,0	1/1:11,19:29:57.13:852,57,0	1/1:5,18:23:48.16:792,48,0	1/1:1,8:9:24.08:396,24,0
chr10	109738983	.	GAC	G	1688.50	PASS	AB=0.878;AC=24;AF=0.444;AN=54;BaseQRankSum=-1.927;DP=722;FS=2.660;HRun=0;HaplotypeScore=218.8679;InbreedingCoeff=0.6459;MQ=38.18;MQ0=55;MQRankSum=2.386;QD=4.72;ReadPosRankSum=1.262;VQSLOD=2.7162;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:31:2.99:0,3,25	0/0:10,0:10:24.08:0,24,386	0/0:27,0:2:3.01:0,3,32	./.	1/1:13,5:16:13.23:131,13,0	0/1:16,6:21:27.11:116,0,27	1/1:26,7:28:23.91:226,24,0	0/0:26,0:16:13.15:0,13,76	1/1:21,5:25:8.87:147,9,0	0/1:31,1:28:15.54:16,0,654	0/0:20,0:20:27.48:0,27,465	1/1:20,7:27:8.81:150,9,0	1/1:23,9:32:11.27:275,11,0	1/1:21,5:25:9.84:137,10,0	1/1:23,17:37:8.73:105,9,0	0/0:32,1:32:66.02:0,66,968	0/0:24,0:22:14.74:0,15,81	0/0:15,0:15:10.27:0,10,46	0/0:14,0:6:7.44:0,7,57	0/0:18,0:15:2.84:0,3,14	0/0:43,0:37:5.96:0,6,49	1/1:19,5:23:27.03:298,27,0	1/1:10,4:14:5.99:67,6,0	1/1:13,26:40:5.99:72,6,0	1/1:16,6:22:13.83:142,14,0	0/0:42,0:34:40.82:0,41,330	0/0:21,0:21:13.49:0,13,80	0/0:3,0:3:5.93:0,6,40
chr10	109738989	.	C	CAG	1606.36	PASS	AB=0.907;AC=18;AF=0.321;AN=56;BaseQRankSum=4.689;DP=694;FS=5.128;HRun=0;HaplotypeScore=214.1246;InbreedingCoeff=0.3884;MQ=36.95;MQ0=60;MQRankSum=-4.455;QD=5.76;ReadPosRankSum=0.916;VQSLOD=3.0668;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,9:31:6.81:50,7,0	0/0:9,0:9:24.08:0,24,366	0/0:20,0:1:3.01:0,3,45	0/0:29,0:1:2.99:0,3,23	0/1:18,0:15:10.64:11,0,21	0/0:20,0:19:14.46:0,14,118	0/0:35,0:28:16.27:0,16,172	0/1:23,1:14:74.96:75,0,90	0/1:25,0:23:2.18:2,0,86	0/0:33,0:27:69.01:0,69,893	0/0:20,0:19:45.12:0,45,602	0/0:23,0:23:17.24:0,17,129	0/0:27,0:27:18.34:0,18,174	0/0:25,0:23:4.37:0,4,85	0/0:40,0:37:17.64:0,18,118	0/0:32,0:31:77.99:0,78,1026	1/1:11,11:22:13.45:212,13,0	0/1:10,2:12:63.36:127,0,63	0/1:11,2:6:2.74:141,0,3	1/1:11,5:13:8.87:101,9,0	1/1:43,6:36:19.33:151,19,0	0/0:24,0:23:30.50:0,30,237	0/0:15,0:15:2.68:0,3,40	0/0:41,0:40:8.67:0,9,60	0/0:22,0:22:21.61:0,22,170	0/1:28,13:32:99:662,0,131	1/1:12,7:19:9.85:212,10,0	1/1:3,0:3:1.06:35,1,0
chr10	109738990	.	A	ATGTG	490.84	PASS	AB=0.888;AC=6;AF=0.107;AN=56;BaseQRankSum=6.459;DP=682;FS=10.624;HRun=0;HaplotypeScore=226.7568;InbreedingCoeff=-0.1490;MQ=36.69;MQ0=60;MQRankSum=-4.858;QD=4.09;ReadPosRankSum=-0.883;VQSLOD=1.0990;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,2:33:9.22:0,9,152	0/0:10,0:10:24.08:0,24,503	0/0:19,0:1:3.01:0,3,63	0/0:28,0:1:3.01:0,3,62	0/0:18,0:15:15.05:0,15,219	0/0:19,0:18:14.96:0,15,220	0/0:37,0:30:30.10:0,30,469	0/0:24,0:13:22.78:0,23,345	0/1:25,0:23:98.76:99,0,324	0/0:33,0:26:72.20:0,72,1400	0/0:19,0:18:45.15:0,45,937	0/0:22,0:22:20.57:0,21,325	0/0:27,0:27:41.47:0,41,680	0/0:24,0:22:18:0,18,224	0/0:39,0:36:18.04:0,18,261	0/0:31,0:30:78.27:0,78,1618	0/1:22,1:21:99:112,0,142	0/1:9,2:11:97.71:98,0,295	0/0:13,0:6:18.04:0,18,263	0/0:14,1:12:9.03:0,9,153	0/0:47,2:35:10.71:0,11,164	0/0:24,0:23:39.11:0,39,547	0/0:12,0:12:9.50:0,10,149	0/0:41,0:40:11.11:0,11,188	0/0:22,0:22:29.10:0,29,464	0/1:38,2:31:86.62:87,0,1090	0/1:14,4:18:99:147,0,107	0/1:2,1:3:71.16:71,0,88
chr10	109738993	.	C	CAG	160.83	PASS	AB=0.966;AC=10;AF=0.185;AN=54;BaseQRankSum=6.999;DP=666;FS=15.497;HRun=0;HaplotypeScore=212.2411;InbreedingCoeff=-0.0771;MQ=36.13;MQ0=60;MQRankSum=-5.100;QD=1.01;ReadPosRankSum=4.617;VQSLOD=1.2803;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:32:5.47:0,5,34	0/0:10,0:10:27.07:0,27,390	0/0:15,0:1:3.01:0,3,45	./.	0/0:17,1:15:1.12:0,1,27	0/0:17,0:16:14.93:0,15,120	0/0:36,0:29:16.27:0,16,171	0/0:23,0:11:3:0,3,68	0/1:24,0:22:5.67:6,0,69	0/0:33,0:26:75.06:0,75,950	0/0:20,0:19:45.12:0,45,605	0/0:21,1:22:14.35:0,14,95	0/0:26,1:27:11.80:0,12,143	0/0:20,4:22:4.37:0,4,83	0/0:37,0:34:14.61:0,15,93	0/0:32,0:31:74.98:0,75,998	0/1:25,0:23:24.10:59,0,24	0/1:11,0:11:8.05:8,0,116	0/1:12,0:6:13.84:14,0,74	0/1:15,0:12:0.79:1,0,13	0/0:48,2:35:5.51:0,6,47	0/0:21,1:21:24.39:0,24,180	0/1:10,0:10:0.31:0,0,15	0/0:38,0:37:3.17:0,3,13	0/0:18,2:20:13.78:0,14,100	0/1:40,0:32:99:102,0,270	1/1:18,0:18:2.41:49,2,0	0/1:2,1:3:13.91:42,0,14
chr10	109738996	.	A	ATAGG	460.16	PASS	AB=0.984;AC=9;AF=0.167;AN=54;BaseQRankSum=5.670;DP=648;FS=19.523;HRun=0;HaplotypeScore=228.6086;InbreedingCoeff=-0.0839;MQ=35.84;MQ0=60;MQRankSum=-6.038;QD=2.91;ReadPosRankSum=-1.038;VQSLOD=0.6942;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:30:2.29:0,2,53	0/0:10,0:10:27.09:0,27,565	0/0:11,0:1:3.01:0,3,62	./.	0/0:19,0:15:14.67:0,15,122	0/0:16,0:16:11.53:0,12,128	0/0:35,0:28:22.49:0,22,177	0/1:27,0:14:99:165,0,257	0/1:20,3:21:5.87:6,0,164	0/0:32,0:25:75.25:0,75,1458	0/0:20,0:19:42.14:0,42,874	0/0:21,0:21:17.66:0,18,180	0/0:25,0:25:34.67:0,35,271	0/0:24,0:22:15.45:0,15,146	0/0:36,0:33:8.75:0,9,66	0/0:33,0:32:74.84:0,75,1495	0/1:23,0:21:70.10:70,0,134	0/1:12,0:12:43.20:43,0,187	0/1:12,0:6:1.77:2,0,211	0/0:15,0:12:9:0,9,88	0/0:46,0:31:4.55:0,5,104	0/0:22,0:21:28.97:0,29,202	0/0:10,0:10:6.01:0,6,62	0/0:37,0:36:4.81:0,5,36	0/0:19,0:20:20.03:0,20,222	0/1:41,0:33:99:113,0,882	0/1:17,0:17:99:141,0,108	1/1:3,0:3:0.76:45,1,0
chr10	109739001	.	GAC	G	356.78	PASS	AB=0.950;AC=25;AF=0.500;AN=50;BaseQRankSum=5.003;DP=594;FS=1.620;HRun=0;HaplotypeScore=197.0994;InbreedingCoeff=0.1351;MQ=35.12;MQ0=53;MQRankSum=-3.828;QD=0.90;ReadPosRankSum=-1.007;VQSLOD=2.3497;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,2:26:0.40:0,0,0	0/0:10,0:10:20.86:0,21,288	./.	./.	0/1:15,2:15:0.96:1,0,5	0/1:13,1:14:0.11:0,0,0	1/1:28,3:24:2.74:12,3,0	0/1:20,6:15:99:176,0,132	1/1:18,4:21:9.35:40,9,0	0/0:34,0:27:59.75:0,60,768	0/0:20,0:19:11.55:0,12,318	0/1:18,0:21:3.23:6,0,3	1/1:22,0:23:8.83:39,9,0	1/1:22,0:20:0.55:8,1,0	0/0:33,0:31:0.44:0,0,1	0/0:32,0:31:55.61:0,56,881	0/1:21,0:20:16.51:24,0,17	0/1:7,0:9:23.97:24,0,46	0/1:14,0:8:0.21:0,0,99	./.	0/1:42,0:27:0.03:0,0,0	0/0:18,0:17:2.92:0,3,17	0/0:9,0:9:0.89:0,1,2	0/1:31,0:30:4.28:17,0,4	1/1:15,4:19:1.43:22,1,0	0/1:28,3:25:63.88:64,0,187	1/1:10,4:17:1.47:43,1,0	0/1:1,0:2:4.06:9,0,4
chr10	109739003	.	C	CAG	271.62	PASS	AB=0.949;AC=16;AF=0.308;AN=52;BaseQRankSum=6.144;DP=580;FS=9.023;HRun=0;HaplotypeScore=191.7002;InbreedingCoeff=0.0258;MQ=34.48;MQ0=55;MQRankSum=-4.772;QD=1.02;ReadPosRankSum=1.061;VQSLOD=1.7534;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,2:22:0.43:1,0,0	0/0:10,0:10:24.06:0,24,336	./.	./.	0/1:17,1:14:6.92:7,0,18	0/0:14,1:14:8.57:0,9,64	0/1:29,0:22:4.46:4,0,30	0/1:30,0:17:90.70:91,0,154	0/1:22,0:20:20.80:21,0,28	0/0:34,0:27:77.92:0,78,975	0/0:21,0:20:44.90:0,45,514	0/0:19,0:19:8.15:0,8,57	0/0:22,0:22:6.53:0,7,81	0/1:20,0:18:0.49:0,0,73	0/0:33,0:30:5.87:0,6,41	0/0:33,0:32:68.06:0,68,945	0/1:21,1:20:27.62:28,0,29	0/1:6,2:9:25.54:39,0,26	0/0:14,0:8:10.40:0,10,148	0/0:11,1:9:2.60:0,3,10	1/1:44,0:29:1.31:2,1,0	0/0:16,0:15:7.07:0,7,83	0/0:9,0:9:0.45:0,0,21	0/0:30,0:29:2.75:0,3,12	0/0:20,0:20:10.96:0,11,75	0/1:28,2:22:99:107,0,186	1/1:13,3:16:2.81:63,3,0	1/1:1,1:2:4.56:39,5,0
chr10	109739011	.	C	CAGAT	1392.27	PASS	AB=0.907;AC=29;AF=0.537;AN=54;BaseQRankSum=5.422;DP=545;FS=1.378;HRun=0;HaplotypeScore=178.4256;InbreedingCoeff=0.2748;MQ=32.80;MQ0=61;MQRankSum=-2.582;QD=4.31;ReadPosRankSum=0.221;VQSLOD=2.8455;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:19:0.39:1,0,0	0/0:9,0:9:21.07:0,21,416	./.	0/0:22,0:2:5.85:0,6,69	1/1:12,3:13:9.03:174,9,0	0/1:10,4:13:2.71:52,0,3	1/1:21,4:18:2.85:64,3,0	0/0:33,0:19:25.38:0,25,464	0/1:18,3:20:14.42:103,0,14	0/0:33,0:26:72.22:0,72,1291	0/0:18,0:17:36.10:0,36,608	1/1:12,5:17:9.03:186,9,0	1/1:7,9:16:12.50:170,13,0	1/1:11,5:14:6:88,6,0	1/1:13,15:25:5.13:52,5,0	0/0:32,0:31:68.80:0,69,1279	0/1:20,0:18:7.83:8,0,53	0/1:9,0:9:14.58:15,0,92	0/0:14,0:7:13.81:0,14,145	0/0:9,0:6:0:0,0,0	0/0:43,0:25:0.18:0,0,0	1/1:9,2:11:3.01:53,3,0	1/1:6,3:9:2.92:64,3,0	1/1:19,9:28:5.93:151,6,0	0/1:13,5:18:5.17:165,0,5	0/1:30,0:23:89.35:89,0,372	0/1:16,1:17:11.20:107,0,11	1/1:2,0:2:0.78:13,1,0
chr10	109739012	.	A	AGG	226.08	PASS	AB=0.985;AC=23;AF=0.426;AN=54;BaseQRankSum=6.961;DP=534;FS=2.798;HRun=0;HaplotypeScore=167.6688;InbreedingCoeff=0.2385;MQ=32.77;MQ0=61;MQRankSum=-3.122;QD=0.80;ReadPosRankSum=-1.157;VQSLOD=2.8020;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:18:0.32:1,0,0	0/0:9,0:9:21.07:0,21,342	./.	0/0:21,0:2:6.02:0,6,71	1/1:17,0:13:6.96:29,7,0	1/1:14,0:13:4.18:29,4,0	1/1:21,0:15:2.67:14,3,0	0/0:36,0:21:52.49:0,52,565	0/1:20,1:19:18.40:57,0,18	0/0:33,0:26:72.23:0,72,1123	0/0:18,0:17:36.12:0,36,557	1/1:14,4:18:5.16:15,5,0	0/1:15,1:16:5.89:16,0,6	1/1:14,2:14:3.27:16,3,0	0/0:25,1:23:1.55:0,2,5	0/0:33,0:32:69.71:0,70,1112	0/1:20,0:18:39.20:39,0,81	0/1:8,0:8:87.89:101,0,88	0/0:14,0:7:21.02:0,21,257	0/0:9,0:6:0:0,0,0	1/1:43,0:25:1.66:4,2,0	0/0:10,0:9:1.72:0,2,4	1/1:6,1:7:1.47:4,1,0	1/1:25,1:26:0.74:2,1,0	0/1:18,0:18:9.06:9,0,15	0/0:30,0:23:30.96:0,31,551	0/1:17,0:17:35.86:36,0,116	0/0:2,0:2:0.65:0,1,12
chr10	109739024	.	A	ATGTG	102.26	PASS	AB=0.959;AC=8;AF=0.143;AN=56;BaseQRankSum=4.598;DP=562;FS=1.547;HRun=0;HaplotypeScore=165.3800;InbreedingCoeff=0.0618;MQ=31.30;MQ0=62;MQRankSum=-4.322;QD=0.59;ReadPosRankSum=-3.063;VQSLOD=1.7613;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,2:17:0.03:0,0,1	0/0:11,0:11:24.08:0,24,431	0/0:16,0:1:3.01:0,3,63	0/0:23,0:2:6.02:0,6,112	0/0:19,0:16:9.03:0,9,188	0/1:13,0:12:0.14:0,0,1	0/0:19,0:13:0:0,0,0	0/0:46,0:30:73.75:0,74,1158	0/1:21,0:19:66.50:66,0,110	0/0:29,0:23:66.22:0,66,1295	0/0:15,0:15:30.05:0,30,511	0/0:19,0:19:7.36:0,7,77	0/0:14,0:14:6.02:0,6,93	0/0:13,0:11:5.46:0,5,68	0/0:28,0:25:0.47:0,0,2	0/0:33,0:32:74.84:0,75,1483	0/0:15,0:14:8.46:0,8,122	0/1:12,1:12:53.96:54,0,427	0/0:18,0:8:14.79:0,15,239	0/0:9,0:6:3.01:0,3,33	1/1:57,0:37:1:3,1,0	0/0:9,0:8:3.01:0,3,62	0/0:8,0:8:3.01:0,3,63	0/0:24,0:24:3.01:0,3,64	0/0:17,0:17:5.05:0,5,87	0/1:30,1:22:41.85:42,0,896	0/1:16,0:17:41.93:42,0,258	0/0:3,0:3:8.39:0,8,97
chr10	109739033	.	GAC	G	1305.78	PASS	AB=0.767;AC=22;AF=0.458;AN=48;BaseQRankSum=3.245;DP=532;FS=4.709;HRun=0;HaplotypeScore=118.1227;InbreedingCoeff=0.2497;MQ=29.86;MQ0=71;MQRankSum=-6.254;QD=4.17;ReadPosRankSum=-0.090;VQSLOD=2.4629;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,7:18:0.46:1,0,0	0/0:9,0:9:12.04:0,12,189	0/0:21,0:1:3.01:0,3,35	0/0:30,0:2:5.92:0,6,41	./.	0/1:7,4:10:0.02:0,0,0	./.	1/1:23,20:25:29.99:546,30,0	0/1:13,6:18:7.09:49,0,7	0/0:23,1:19:6.98:0,7,601	0/0:15,0:13:8.51:0,9,234	1/1:12,6:18:2.64:25,3,0	1/1:6,2:8:6.29:46,6,0	1/1:9,3:10:5.37:37,5,0	0/0:16,4:17:0.42:0,0,1	0/0:34,0:33:47.64:0,48,1059	0/1:15,1:15:29.43:29,0,45	0/0:12,3:14:19.47:0,19,95	0/1:11,7:10:51.85:188,0,52	0/0:8,1:4:3.01:0,3,39	0/1:54,7:39:0.05:0,0,0	./.	./.	0/1:12,5:17:0:0,0,0	1/1:8,6:14:0.83:1,1,0	0/1:20,11:23:70.67:328,0,71	1/1:10,9:19:9.42:130,9,0	0/1:1,3:4:39.65:61,0,40
chr10	109739047	.	GAT	G	238.84	PASS	AB=0.985;AC=23;AF=0.442;AN=52;BaseQRankSum=6.929;DP=597;FS=4.637;HRun=0;HaplotypeScore=160.7492;InbreedingCoeff=0.3171;MQ=30.64;MQ0=65;MQRankSum=-5.223;QD=0.66;ReadPosRankSum=-3.964;VQSLOD=1.3707;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:20:0.47:1,0,0	0/0:7,0:7:20.99:0,21,316	0/0:27,0:1:3.01:0,3,57	0/0:35,0:2:6.02:0,6,83	./.	1/1:13,0:12:2.93:15,3,0	0/1:15,0:11:0.11:0,0,0	0/1:43,0:25:2.94:3,0,75	0/1:22,1:23:20.22:20,0,30	0/0:22,0:20:52.64:0,53,757	0/0:14,0:12:30.09:0,30,475	1/1:24,1:25:12.39:96,12,0	1/1:12,0:12:2.61:37,3,0	0/1:18,0:17:0.85:7,0,1	1/1:20,1:21:2.67:8,3,0	0/0:39,0:39:94.77:0,95,1632	0/0:16,0:15:3.19:0,3,68	0/0:18,0:17:8.43:0,8,134	0/0:18,0:13:11.20:0,11,175	0/0:10,0:8:3.01:0,3,57	0/1:59,0:42:0.02:0,0,0	0/1:9,1:10:0:0,0,0	./.	0/1:13,0:13:0.02:0,0,0	1/1:17,0:17:2.76:7,3,0	0/1:32,0:28:67.86:68,0,109	1/1:30,1:31:9.23:103,9,0	0/1:5,0:5:10.28:10,0,48
chr10	109739060	.	A	ATG	342.35	PASS	AB=0.939;AC=21;AF=0.420;AN=50;BaseQRankSum=4.992;DP=718;FS=0.796;HRun=0;HaplotypeScore=246.4824;InbreedingCoeff=-0.1507;MQ=30.60;MQ0=63;MQRankSum=-4.883;QD=0.74;ReadPosRankSum=-1.672;VQSLOD=2.3654;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,2:20:0.16:0,0,0	0/0:6,0:6:18.06:0,18,294	0/0:22,0:1:3.01:0,3,41	./.	./.	0/0:24,1:25:0.26:0,0,3	0/1:21,0:17:0.07:0,0,0	0/0:33,0:17:36.05:0,36,460	0/1:33,2:35:4.54:5,0,244	0/0:21,0:18:51.17:0,51,806	0/0:17,0:15:36.12:0,36,581	0/1:27,5:32:43.16:43,0,81	0/1:20,3:24:42.31:42,0,102	0/1:24,2:25:9.82:35,0,10	0/1:34,3:37:18.68:39,0,19	0/0:39,0:39:95.99:0,96,1551	0/1:24,1:24:22.49:22,0,97	0/1:22,0:21:10.67:11,0,362	0/1:11,1:11:16.54:17,0,262	0/0:14,3:15:3.01:0,3,49	1/1:58,1:42:0.61:2,1,0	1/1:14,3:17:0.47:1,0,0	./.	1/1:18,1:19:0.02:0,0,0	1/1:25,3:28:3.72:11,4,0	0/1:35,3:34:90.43:90,0,628	0/1:38,2:40:84.71:85,0,220	0/1:8,0:8:67.12:67,0,155
chr10	109739062	.	A	ATGCG	625.51	PASS	AB=0.981;AC=17;AF=0.340;AN=50;BaseQRankSum=5.810;DP=722;FS=2.836;HRun=0;HaplotypeScore=264.7010;InbreedingCoeff=-0.1941;MQ=30.66;MQ0=60;MQRankSum=-4.062;QD=1.44;ReadPosRankSum=-3.789;VQSLOD=2.1308;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:21:0.41:1,0,0	0/0:6,0:6:18.06:0,18,377	0/0:21,0:1:3.01:0,3,56	./.	0/0:23,0:23:2.97:0,3,20	1/1:26,0:26:0.11:1,0,0	0/0:18,0:16:0.41:0,0,1	0/0:30,0:15:36.09:0,36,645	0/1:35,0:35:20.14:20,0,327	0/0:21,0:18:51.18:0,51,1052	0/0:17,0:15:39.09:0,39,773	0/1:32,2:34:63.21:63,0,157	0/1:24,0:26:72.71:73,0,95	0/1:28,0:28:2.07:37,0,2	0/1:40,0:40:35.60:36,0,48	0/0:38,0:38:92.99:0,93,1945	0/1:25,0:24:63.76:64,0,175	0/1:22,0:21:34.80:35,0,558	0/1:11,0:8:33.92:34,0,213	0/0:16,0:15:2.89:0,3,63	0/1:56,1:42:0.36:1,0,0	./.	./.	1/1:18,0:19:0.73:2,1,0	0/0:28,0:28:0.89:0,1,9	0/1:37,1:34:99:179,0,931	0/1:39,2:41:99:128,0,345	0/1:9,0:9:78.85:79,0,199
chr10	109739065	.	CACAGAT	C	1888.07	PASS	AB=0.897;AC=18;AF=0.360;AN=50;BaseQRankSum=6.341;DP=719;FS=29.676;HRun=0;HaplotypeScore=262.8210;InbreedingCoeff=-0.0813;MQ=30.98;MQ0=58;MQRankSum=-7.024;QD=4.53;ReadPosRankSum=-4.119;VQSLOD=1.0055;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,8:21:0.40:0,0,1	0/0:6,0:6:18.06:0,18,534	./.	./.	0/0:21,2:23:3.01:0,3,35	1/1:19,5:24:6.12:38,6,0	0/1:14,4:16:0.15:0,0,0	0/1:28,0:13:1.91:2,0,14	0/1:35,1:36:65.26:65,0,151	0/0:23,0:20:43.39:0,43,1277	0/0:18,0:16:39.13:0,39,1223	1/1:35,0:35:6.01:169,6,0	0/1:28,1:29:24.66:150,0,25	0/1:27,2:28:15.40:46,0,15	0/1:36,4:40:6.90:113,0,7	0/0:39,0:39:84.73:0,85,2582	0/1:19,6:24:35.76:247,0,36	0/1:13,7:19:99:432,0,344	0/1:10,0:7:13.89:14,0,82	0/0:12,5:16:2.94:0,3,61	0/0:45,10:40:1.41:0,1,2	0/0:15,2:17:0.47:0,0,1	./.	1/1:18,2:20:1.92:8,2,0	0/1:25,1:26:7.77:8,0,20	0/1:27,9:33:96.63:582,0,97	0/1:34,7:41:94.68:150,0,95	0/0:9,0:9:9.78:0,10,55
chr10	109739067	.	CAGAT	C	1144.32	PASS	AB=1.000;AC=20;AF=0.400;AN=50;BaseQRankSum=6.890;DP=705;FS=25.187;HRun=0;HaplotypeScore=263.9223;InbreedingCoeff=0.0672;MQ=30.94;MQ0=57;MQRankSum=-6.801;QD=2.90;ReadPosRankSum=-3.703;VQSLOD=0.9673;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:0.45:0,0,1	0/0:6,0:6:18.06:0,18,479	./.	./.	0/0:21,0:22:3.01:0,3,35	1/1:24,0:24:5.16:37,5,0	0/0:18,0:16:0.47:0,0,1	0/1:28,0:13:20.27:20,0,31	0/1:35,0:35:33.07:33,0,115	0/0:24,0:21:34.78:0,35,1146	0/0:17,0:16:39.04:0,39,979	1/1:32,0:34:1.77:124,2,0	1/1:29,0:29:8.09:113,8,0	1/1:27,1:28:0.24:41,0,0	1/1:39,0:39:4.65:94,5,0	0/0:35,0:35:84.73:0,85,2167	0/1:25,0:24:52.29:151,0,52	0/1:20,0:19:99:193,0,277	0/1:10,0:7:4.77:5,0,109	0/0:15,1:15:2.92:0,3,78	0/0:52,1:40:1.41:0,1,2	0/0:15,0:15:0.47:0,0,1	./.	1/1:17,2:19:2.65:17,3,0	0/1:25,0:25:7.36:7,0,11	0/1:36,0:33:24.99:337,0,25	0/1:41,0:41:40.05:111,0,40	0/0:9,0:9:7.33:0,7,32
chr10	109739069	.	GAT	G	1742.71	PASS	AB=0.922;AC=28;AF=0.560;AN=50;BaseQRankSum=10.067;DP=635;FS=6.495;HRun=0;HaplotypeScore=227.1428;InbreedingCoeff=0.4031;MQ=30.92;MQ0=54;MQRankSum=-8.742;QD=4.04;ReadPosRankSum=-2.665;VQSLOD=1.6350;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,2:18:0.10:0,0,1	0/0:6,0:6:18.06:0,18,329	./.	./.	0/0:12,8:21:3.01:0,3,38	1/1:10,12:22:3.72:17,4,0	0/1:11,1:11:0.05:0,0,0	0/0:22,0:7:11.90:0,12,98	0/1:22,9:32:58.22:132,0,58	0/0:21,0:18:42.20:0,42,827	0/0:17,0:15:33.63:0,34,678	1/1:28,4:32:18.40:147,18,0	1/1:23,2:25:7.29:116,7,0	1/1:22,1:23:7.13:66,7,0	1/1:32,3:37:10.73:84,11,0	0/0:31,1:32:78.26:0,78,1482	0/1:22,3:24:33.35:86,0,33	0/1:19,1:19:99:106,0,196	0/1:10,0:6:25.90:26,0,59	0/0:13,2:15:2.98:0,3,56	0/1:47,1:37:0.01:0,0,0	0/1:14,1:15:0.02:0,0,0	./.	1/1:12,1:15:2.88:20,3,0	1/1:12,7:19:5.53:26,6,0	1/1:25,5:27:44.29:450,44,0	1/1:18,19:37:49.47:468,49,0	1/1:2,3:7:14.99:156,15,0
chr10	109739072	.	A	AGG	1513.91	PASS	AB=0.908;AC=24;AF=0.480;AN=50;BaseQRankSum=3.620;DP=707;FS=34.350;HRun=0;HaplotypeScore=255.8540;InbreedingCoeff=-0.2920;MQ=30.96;MQ0=52;MQRankSum=-6.371;QD=2.91;ReadPosRankSum=-6.307;VQSLOD=0.2175;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,2:21:3:20,3,0	0/0:6,0:6:18.06:0,18,290	./.	./.	0/0:23,2:25:3.01:0,3,49	0/1:25,1:26:23.73:46,0,24	1/1:18,0:17:3.03:21,3,0	0/1:19,0:6:36.53:70,0,37	0/1:29,4:33:4.62:5,0,203	0/0:22,0:19:57.19:0,57,902	0/0:17,0:15:39.13:0,39,617	0/1:32,7:39:64.30:146,0,64	0/1:28,5:33:75.22:195,0,75	0/1:29,4:32:19.96:74,0,20	0/1:39,4:43:43.44:90,0,43	0/0:33,0:33:83.58:0,84,1320	0/1:26,1:26:12.82:13,0,144	0/1:22,0:21:83.98:84,0,276	0/1:10,1:7:67.14:104,0,67	0/0:13,3:16:3.01:0,3,49	1/1:56,3:46:0.56:1,1,0	1/1:13,4:17:0.84:2,1,0	./.	1/1:13,3:16:3.71:38,4,0	0/1:19,3:21:9:65,0,9	0/1:29,4:31:99:310,0,208	0/1:35,4:39:99:251,0,101	0/1:5,2:7:30.26:120,0,30
chr10	109739077	.	GAC	G	1065.58	PASS	AB=0.836;AC=14;AF=0.259;AN=54;BaseQRankSum=7.065;DP=765;FS=44.358;HRun=0;HaplotypeScore=263.1109;InbreedingCoeff=-0.2495;MQ=32.53;MQ0=51;MQRankSum=-6.812;QD=2.31;ReadPosRankSum=0.988;VQSLOD=1.2727;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,10:23:2.92:0,3,49	0/0:6,0:6:15.04:0,15,221	./.	0/0:30,0:2:2.29:0,2,30	0/0:24,5:29:3.01:0,3,40	0/1:21,6:27:12.72:13,0,121	0/1:12,7:18:2.66:3,0,41	0/0:15,0:7:5.95:0,6,68	0/1:26,6:32:99:148,0,130	0/0:24,0:21:57.16:0,57,876	0/0:17,0:16:42.11:0,42,635	0/1:39,4:43:82.93:83,0,181	0/1:36,2:38:27.87:28,0,248	0/1:32,4:35:24.95:25,0,34	0/1:40,6:46:61.73:75,0,62	0/0:34,0:34:75.25:0,75,1234	0/1:22,6:27:60.39:142,0,60	0/1:19,7:25:99:165,0,412	0/0:13,0:8:14.84:0,15,142	0/1:11,8:19:0.03:0,0,0	0/1:52,10:51:0.01:0,0,0	0/0:20,2:22:2.97:0,3,35	0/0:25,1:26:0.89:0,1,2	0/0:12,4:16:0.44:0,0,1	0/0:23,1:23:14.59:0,15,206	0/1:30,10:39:99:329,0,417	0/1:30,9:39:99:157,0,158	0/1:6,1:7:30.29:30,0,86
chr10	109739091	.	G	GACAC	1128.18	PASS	AB=0.932;AC=16;AF=0.286;AN=56;BaseQRankSum=6.237;DP=846;FS=20.430;HRun=0;HaplotypeScore=296.9709;InbreedingCoeff=-0.1097;MQ=32.62;MQ0=32;MQRankSum=-4.450;QD=2.43;ReadPosRankSum=0.778;VQSLOD=1.1075;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:2.22:0,2,58	0/0:6,0:6:18.05:0,18,300	0/0:21,0:2:1.25:0,1,3	0/0:31,0:2:3.01:0,3,47	0/0:37,0:37:3.01:0,3,54	0/0:29,0:29:15.96:0,16,218	0/1:29,0:28:23.21:23,0,84	0/0:20,0:12:22.37:0,22,264	0/0:32,0:32:8.72:0,9,332	0/0:20,0:19:54.17:0,54,1002	0/0:17,0:16:45.14:0,45,810	0/0:45,6:52:17.06:0,17,446	0/1:32,14:46:99:137,0,466	0/1:34,10:43:99:174,0,103	0/1:35,14:49:75.28:75,0,122	0/0:35,0:35:87.22:0,87,1608	0/1:28,0:28:34.07:34,0,164	0/1:27,0:26:70.79:71,0,625	0/1:14,0:9:9.52:10,0,239	0/1:23,0:23:0.31:0,0,0	1/1:63,0:54:1.16:2,1,0	0/0:25,0:25:2.71:0,3,47	0/1:25,7:33:0.03:0,0,0	1/1:14,1:17:2.94:76,3,0	0/0:28,0:27:14.68:0,15,268	0/1:48,0:48:99:423,0,922	0/1:36,0:36:99:202,0,280	0/1:8,0:8:39.51:40,0,63
chr10	109739099	.	GACAC	G	5370.19	PASS	AB=0.660;AC=29;AF=0.518;AN=56;BaseQRankSum=5.464;DP=882;FS=12.495;HRun=0;HaplotypeScore=290.3374;InbreedingCoeff=0.1023;MQ=34.42;MQ0=29;MQRankSum=-7.097;QD=7.98;ReadPosRankSum=2.031;VQSLOD=2.3752;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,6:25:2.65:50,3,0	0/0:6,0:6:18.06:0,18,441	0/0:28,0:3:0.88:0,1,123	0/0:39,0:7:14.31:0,14,227	0/1:14,21:38:0.10:0,0,0	1/1:10,18:29:6.16:257,6,0	1/1:7,20:28:12.07:169,12,0	0/1:20,2:18:26.06:265,0,26	0/1:12,20:32:48.50:366,0,49	0/0:25,0:24:54.17:0,54,1231	0/0:17,0:16:42.14:0,42,1028	1/1:20,33:56:44.44:615,44,0	0/1:22,25:49:40.51:675,0,41	0/1:19,26:44:35.93:185,0,36	0/1:24,22:48:34.27:185,0,34	0/0:36,1:39:87.20:0,87,1873	1/1:7,8:22:1.31:175,1,0	0/1:11,9:26:46.34:475,0,46	1/1:6,7:11:20.59:231,21,0	1/1:6,9:24:4.33:15,4,0	0/1:23,25:52:0.01:0,0,1	1/1:7,20:27:2.43:34,2,0	0/0:14,22:36:0.94:0,1,2	0/0:7,10:19:2.25:0,2,7	1/1:5,22:27:14.19:238,14,0	0/1:21,17:52:99:1096,0,195	0/1:17,9:36:99:277,0,124	0/1:5,1:8:63.87:64,0,66
chr10	109739117	.	CACAT	C	2466.75	PASS	AB=0.996;AC=18;AF=0.321;AN=56;BaseQRankSum=7.523;DP=978;FS=4.926;HRun=0;HaplotypeScore=334.1432;InbreedingCoeff=-0.2746;MQ=36.96;MQ0=18;MQRankSum=-9.299;QD=4.03;ReadPosRankSum=6.280;VQSLOD=1.3265;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:12.27:42,0,12	0/0:9,0:9:27.05:0,27,588	0/0:47,0:11:20.61:0,21,343	0/0:42,0:14:30.99:0,31,464	0/1:36,0:36:0.10:0,0,0	0/1:30,1:30:14.33:165,0,14	0/1:33,0:33:3.87:82,0,4	0/1:47,0:39:52.44:52,0,567	0/1:31,0:31:90.81:220,0,91	0/0:32,0:32:92.26:0,92,1772	0/0:15,0:15:25.16:0,25,1133	0/1:58,1:59:12.90:306,0,13	0/1:50,1:51:99:406,0,180	0/1:49,0:49:91.20:91,0,116	0/1:48,0:48:99:101,0,115	0/0:37,0:37:95.30:0,95,2257	0/1:21,0:21:48.09:72,0,48	0/1:25,0:24:93.02:233,0,93	0/1:24,0:23:63.98:64,0,282	0/0:25,1:26:5.33:0,5,29	0/0:56,1:51:5.37:0,5,52	0/0:37,1:38:5.40:0,5,100	0/0:39,0:39:0.82:0,1,2	0/0:24,0:24:6.28:0,6,48	1/1:32,0:31:4.88:137,5,0	0/1:63,0:63:99:502,0,459	0/1:35,0:35:99:120,0,284	0/1:7,0:7:25.39:25,0,146
chr10	109739141	.	GAC	G	1557.71	PASS	AB=0.904;AC=22;AF=0.393;AN=56;BaseQRankSum=0.628;DP=893;FS=14.465;HRun=0;HaplotypeScore=298.4501;InbreedingCoeff=0.3416;MQ=38.43;MQ0=15;MQRankSum=0.646;QD=3.29;ReadPosRankSum=-1.948;VQSLOD=0.9595;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:0.14:0,0,0	0/1:7,1:8:15.31:15,0,244	0/0:43,0:13:11.61:0,12,127	0/0:42,0:17:2.66:0,3,71	0/0:21,0:27:0:0,0,0	0/0:24,0:30:12.04:0,12,54	0/1:14,0:32:7.38:40,0,7	0/0:39,0:37:10.87:0,11,105	0/1:22,0:27:10.78:11,0,76	0/0:35,1:36:68.37:0,68,1486	0/1:10,1:10:19.80:20,0,157	1/1:40,19:60:41.75:482,42,0	1/1:29,16:46:9.17:349,9,0	1/1:38,9:48:10.19:141,10,0	1/1:33,13:47:3.93:135,4,0	0/1:29,2:30:3.55:4,0,918	0/1:22,0:21:0.47:0,0,30	0/0:19,0:19:19.40:0,19,197	0/1:17,0:14:6.66:7,0,95	0/0:23,0:23:2.72:0,3,45	0/0:48,0:44:0:0,0,0	1/1:24,11:37:20.64:232,21,0	1/1:30,12:42:12.35:143,12,0	1/1:13,13:26:11.87:145,12,0	0/0:20,0:29:10.27:0,10,42	0/0:53,0:51:5.83:0,6,577	0/0:25,0:25:4.82:0,5,53	0/0:5,0:5:6.32:0,6,54
chr10	109739150	.	ACACACACACATACACACATGCGCACGCATAGG	A	2347.48	PASS	AB=0.963;AC=19;AF=0.339;AN=56;BaseQRankSum=7.977;DP=832;FS=2.367;HRun=0;HaplotypeScore=478.5945;InbreedingCoeff=0.1393;MQ=38.07;MQ0=17;MQRankSum=-6.952;QD=5.93;ReadPosRankSum=-1.913;VQSLOD=0.3044;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:0.38:0,0,2	0/0:7,0:7:20.93:0,21,659	0/0:43,0:12:24.85:0,25,730	0/0:40,0:13:15.38:0,15,434	0/0:27,0:27:8.89:0,9,509	0/0:31,0:30:14.77:0,15,599	0/0:30,0:30:20.24:0,20,607	0/1:32,0:30:99:259,0,113	0/1:25,0:25:46.04:46,0,755	0/0:36,0:36:45.27:0,45,5986	0/0:9,0:8:20.54:0,21,885	0/0:59,0:59:36.50:0,37,2364	0/1:42,0:42:96.74:97,0,1338	0/1:41,0:41:99:177,0,648	0/1:41,0:41:52.36:52,0,913	0/0:27,0:26:72.24:0,72,4210	1/1:14,0:13:9.45:87,9,0	0/1:18,0:18:32.43:286,0,32	0/1:13,0:10:5.87:209,0,6	1/1:22,0:22:1.34:4,1,0	1/1:39,0:36:0.86:2,1,0	0/0:39,0:39:21.54:0,22,1148	0/0:43,0:43:13.71:0,14,780	0/0:28,0:28:15.86:0,16,944	0/1:33,0:33:92.60:93,0,329	0/1:25,25:48:99:1033,0,752	1/1:20,0:20:13.61:115,14,0	1/1:6,0:6:2.64:51,3,0
chr10	109739153	.	C	CAG	1015.53	PASS	AB=0.960;AC=17;AF=0.304;AN=56;BaseQRankSum=8.275;DP=792;FS=12.299;HRun=0;HaplotypeScore=261.8421;InbreedingCoeff=-0.0940;MQ=37.30;MQ0=17;MQRankSum=-6.506;QD=2.46;ReadPosRankSum=-4.035;VQSLOD=0.6935;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:0.41:2,0,0	0/0:7,0:7:21.03:0,21,284	0/1:42,0:10:2.20:2,0,176	0/0:37,0:12:16.62:0,17,177	0/0:25,2:27:8.61:0,9,71	0/0:28,0:27:17.59:0,18,136	0/0:29,0:29:23.02:0,23,148	0/1:25,1:25:99:182,0,205	0/1:22,0:22:26.70:27,0,110	0/0:36,0:36:99:0,108,1518	0/0:9,0:8:21.01:0,21,254	0/0:55,4:59:44.13:0,44,318	0/1:36,1:38:99:113,0,186	0/1:40,1:41:18.87:19,0,66	0/1:37,4:41:56.44:56,0,63	0/0:27,0:26:72.13:0,72,1002	0/1:13,0:12:22.49:31,0,22	0/1:14,2:16:36:36,0,142	0/1:9,2:9:73.42:128,0,73	0/0:18,1:19:2.92:0,3,25	0/1:35,0:32:0.60:1,0,1	0/1:35,2:37:6.49:6,0,118	0/0:38,4:42:13.73:0,14,105	0/0:28,0:28:13.68:0,14,103	0/0:32,0:32:5.73:0,6,67	0/1:47,0:45:99:415,0,361	1/1:17,0:17:4.38:103,4,0	0/1:8,0:8:0.84:41,0,1
chr10	109739159	.	CAT	C	1210.98	PASS	AB=0.923;AC=21;AF=0.375;AN=56;BaseQRankSum=3.716;DP=710;FS=3.635;HRun=0;HaplotypeScore=225.4713;InbreedingCoeff=-0.0133;MQ=39.38;MQ0=16;MQRankSum=-1.299;QD=2.64;ReadPosRankSum=0.347;VQSLOD=2.7180;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,2:18:0.22:0,0,0	0/0:7,0:7:9.03:0,9,249	0/0:39,1:11:20.11:0,20,313	0/1:31,0:10:1.30:1,0,114	0/0:26,0:26:11.98:0,12,97	0/0:25,1:25:18.48:0,18,170	0/0:27,0:27:5.29:0,5,100	1/1:15,0:14:3.88:199,4,0	0/0:15,1:16:22.20:0,22,167	0/0:37,0:37:78.29:0,78,1660	0/1:8,0:7:8.69:9,0,179	0/1:48,6:54:3.04:175,0,3	1/1:29,4:33:19.40:222,19,0	0/1:31,8:39:20.06:101,0,20	0/1:30,7:37:1.80:30,0,2	0/0:26,0:25:48.49:0,48,1092	0/1:10,1:10:0.24:61,0,0	0/1:16,0:16:45.74:58,0,46	0/1:9,1:8:44.96:66,0,45	0/0:18,0:18:2.68:0,3,20	1/1:28,3:28:0.42:1,0,0	0/1:28,4:32:9.42:72,0,9	0/1:25,9:34:10.38:68,0,10	0/1:26,1:27:30.16:33,0,30	0/0:25,4:29:13.71:0,14,118	0/1:43,1:43:99:175,0,330	0/1:11,1:12:6.01:45,0,6	0/1:6,0:6:7.65:47,0,8
chr10	109739172	.	G	GCA	590.45	PASS	AB=0.756;AC=16;AF=0.286;AN=56;BaseQRankSum=5.891;DP=509;FS=4.379;HRun=0;HaplotypeScore=157.4606;InbreedingCoeff=0.6156;MQ=43.67;MQ0=10;MQRankSum=-6.098;QD=8.56;ReadPosRankSum=0.190;VQSLOD=2.9820;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,5:7:0.20:0,0,0	0/0:6,0:6:14.81:0,15,149	0/0:36,0:16:35.29:0,35,419	0/0:35,0:13:24.07:0,24,299	0/0:13,0:13:12.04:0,12,171	0/0:16,0:16:27.09:0,27,386	0/0:25,2:27:0.29:0,0,433	1/1:2,1:3:6.02:105,6,0	0/0:13,0:13:27.08:0,27,382	0/0:31,0:31:79.44:0,79,1130	0/0:6,0:5:15.02:0,15,191	0/0:37,0:37:44.86:0,45,638	0/0:24,0:24:23.74:0,24,339	0/0:22,1:23:10.54:0,11,243	0/0:22,1:23:17.74:0,18,249	0/0:25,0:24:69.01:0,69,912	1/1:4,1:4:3.48:53,3,0	1/1:7,2:9:13.27:172,13,0	1/1:1,1:1:3.01:51,3,0	0/1:1,3:4:0.08:0,0,0	0/0:8,10:19:0.94:0,1,2	0/0:27,0:27:24.53:0,25,325	0/0:27,1:28:14.99:0,15,213	0/0:21,2:23:17.94:0,18,257	0/0:25,1:26:5.81:0,6,162	0/1:30,2:30:99:212,0,146	1/1:3,1:3:3.01:52,3,0	1/1:2,1:3:8.97:98,9,0
chr10	109739992	.	AT	A	16099.03	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=12.581;DP=663;FS=0.000;HRun=1;HaplotypeScore=114.1470;InbreedingCoeff=0.9997;MQ=80.16;MQ0=0;MQRankSum=-3.317;QD=29.59;ReadPosRankSum=3.202;VQSLOD=4.6112;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,52:52:99:1673,150,0	0/0:12,0:12:33.11:0,33,499	0/0:22,0:22:56.36:0,56,875	0/0:17,0:17:44.48:0,44,646	1/1:2,25:27:65.97:722,66,0	1/1:2,16:18:48.13:536,48,0	1/1:0,25:25:72.19:803,72,0	1/1:2,23:25:69.19:770,69,0	1/1:2,18:20:54.15:602,54,0	0/0:24,0:24:66.22:0,66,1010	0/0:15,0:15:45.14:0,45,665	1/1:1,27:28:69.19:770,69,0	1/1:2,19:21:54.15:602,54,0	1/1:1,29:30:81.22:903,81,0	1/1:3,21:24:69.15:754,69,0	0/0:29,0:29:87.28:0,87,1309	1/1:2,28:30:81.22:904,81,0	1/1:1,15:16:45.12:502,45,0	1/1:3,13:16:42.09:459,42,0	1/1:3,16:19:39.11:435,39,0	1/1:1,36:37:99:1204,108,0	1/1:1,25:26:63.17:703,63,0	1/1:0,13:13:27.07:301,27,0	1/1:0,30:30:84.23:937,84,0	1/1:4,17:21:51.14:569,51,0	1/1:3,32:35:50.31:992,50,0	1/1:2,14:16:45.10:490,45,0	1/1:1,14:15:42.11:469,42,0
chr10	109744146	.	C	CA	3233.06	PASS	AB=0.862;AC=15;AF=0.268;AN=56;BaseQRankSum=-3.598;DP=598;FS=4.806;HRun=9;HaplotypeScore=61.1337;InbreedingCoeff=0.7413;MQ=66.41;MQ0=0;MQRankSum=-0.852;QD=17.48;ReadPosRankSum=0.652;VQSLOD=3.7468;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:77.36:0,77,676	0/0:5,0:5:12:0,12,104	0/1:22,0:17:44.32:44,0,119	0/1:20,1:14:10.74:11,0,111	0/0:31,0:31:86.98:0,87,755	0/0:24,0:25:52.99:0,53,444	0/0:27,0:27:68.98:0,69,599	0/0:25,0:25:32.50:0,32,375	0/0:19,0:19:53.97:0,54,465	0/0:16,0:16:41.99:0,42,364	0/0:18,0:18:50.97:0,51,439	1/1:5,22:27:25.12:505,25,0	0/1:5,5:9:7.80:123,0,8	1/1:4,21:25:37.12:635,37,0	1/1:2,17:19:25.04:491,25,0	0/0:24,0:24:62.97:0,63,543	0/0:33,0:33:83.96:0,84,729	0/0:25,0:25:59.93:0,60,513	0/0:29,0:29:74.98:0,75,651	0/0:14,0:14:32.12:0,32,285	0/0:10,0:10:20.99:0,21,182	1/1:2,18:20:51.14:564,51,0	1/1:0,12:12:30.04:318,30,0	1/1:3,24:27:46.14:737,46,0	0/0:17,0:17:47.99:0,48,417	0/0:25,0:25:62.97:0,63,547	0/0:24,0:24:53.95:0,54,463	0/0:14,0:14:41.99:0,42,364
chr10	109745576	.	A	AAAAC	5374.11	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.300;DP=734;FS=2.659;HRun=0;HaplotypeScore=135.0618;InbreedingCoeff=0.9443;MQ=67.80;MQ0=4;MQRankSum=-0.835;QD=42.65;ReadPosRankSum=2.919;VQSLOD=5.6034;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:48.74:0,49,890	0/0:12,0:12:33.08:0,33,479	0/0:39,0:27:11.08:0,11,347	0/0:43,0:37:55.79:0,56,855	1/1:8,25:34:69.17:1574,69,0	1/1:5,24:29:51.18:1246,51,0	1/1:5,17:24:30.10:733,30,0	0/0:25,0:25:39.11:0,39,584	1/1:2,14:16:30.10:733,30,0	0/0:17,0:17:39.12:0,39,604	0/0:21,0:21:51.16:0,51,795	0/0:29,0:29:60.19:0,60,965	0/0:29,0:29:66.21:0,66,1032	0/0:23,0:23:54.16:0,54,863	0/0:31,0:30:66.20:0,66,1028	0/0:32,0:32:72.22:0,72,1129	0/0:30,0:30:63.20:0,63,1015	0/0:35,0:35:52.44:0,52,1150	0/0:18,0:16:27.07:0,27,414	0/0:25,0:25:54.09:0,54,816	0/0:18,0:18:1.81:0,2,699	0/0:27,0:27:63.20:0,63,1008	0/0:24,0:24:54.17:0,54,855	0/0:20,0:20:51.17:0,51,837	1/1:6,17:23:45.15:1088,45,0	0/0:35,0:34:66.23:0,66,1099	0/0:34,0:34:81.25:0,81,1272	0/0:13,0:13:36.10:0,36,540
chr10	109746456	.	G	GAA	6965.55	PASS	AB=0.781;AC=44;AF=0.786;AN=56;BaseQRankSum=1.498;DP=536;FS=16.336;HRun=11;HaplotypeScore=70.7503;InbreedingCoeff=0.7325;MQ=63.41;MQ0=5;MQRankSum=-2.719;QD=15.24;ReadPosRankSum=1.356;VQSLOD=1.8823;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,33:43:73.99:920,74,0	0/0:8,0:8:24.04:0,24,233	0/0:13,0:11:18.75:0,19,140	0/1:10,0:6:5.60:6,0,38	1/1:3,3:20:32.53:271,33,0	1/1:2,0:16:39.06:372,39,0	1/1:5,0:17:18.03:172,18,0	1/1:16,9:25:46.59:517,47,0	1/1:0,0:14:24.04:235,24,0	0/0:21,0:20:50.12:0,50,483	0/0:13,0:13:36.04:0,36,348	0/1:4,0:18:29.98:49,0,30	1/1:5,0:15:17.85:77,18,0	1/1:2,0:15:22.93:88,23,0	1/1:1,2:21:41.46:224,41,0	0/0:23,0:23:65.80:0,66,616	1/1:6,19:29:32.04:374,32,0	1/1:6,11:17:21.07:304,21,0	1/1:13,5:18:37.98:392,38,0	1/1:5,28:33:80.30:1065,80,0	1/1:2,5:9:15.01:183,15,0	1/1:5,1:20:3.81:107,4,0	1/1:3,0:18:0.22:60,0,0	1/1:1,0:18:29.67:102,30,0	1/1:2,2:16:17.88:201,18,0	1/1:3,18:23:45.56:552,46,0	1/1:2,16:21:28.28:349,28,0	1/1:2,12:15:29.38:347,29,0
chr10	109746735	.	AACAC	A	6880.02	PASS	AB=0.669;AC=28;AF=0.500;AN=56;BaseQRankSum=4.876;DP=908;FS=26.092;HRun=0;HaplotypeScore=192.8750;InbreedingCoeff=0.7652;MQ=64.64;MQ0=12;MQRankSum=-3.348;QD=14.99;ReadPosRankSum=0.494;VQSLOD=2.6289;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,20:44:66.05:1001,66,0	0/0:13,0:14:14.79:0,15,253	0/0:50,0:30:6.02:0,6,119	0/0:39,0:25:0.61:0,1,336	1/1:4,0:19:5.97:56,6,0	1/1:3,0:25:24.03:224,24,0	1/1:14,0:31:14.85:140,15,0	1/1:30,11:41:22.31:308,22,0	1/1:4,0:28:27.03:252,27,0	0/0:31,0:29:57.15:0,57,1153	0/0:12,0:14:26.55:0,27,482	0/0:17,0:44:56.55:0,57,933	0/0:20,0:37:50.82:0,51,916	0/0:20,0:36:24.07:0,24,431	0/0:23,0:50:81.01:0,81,1469	0/0:33,0:36:77.44:0,77,1519	1/1:10,24:34:75.24:1164,75,0	0/1:10,8:19:29.07:272,0,29	1/1:23,9:32:36.18:590,36,0	1/1:15,22:38:51.02:714,51,0	1/1:40,19:57:47.57:860,48,0	0/0:11,0:26:36.10:0,36,637	0/0:8,0:19:18.06:0,18,323	0/0:24,0:49:65.99:0,66,1190	1/1:8,0:22:6.01:56,6,0	0/1:13,9:27:39.53:448,0,40	1/1:10,11:21:39.03:530,39,0	1/1:7,7:15:8.51:267,9,0
chr10	109746955	.	GCA	G	3024.80	PASS	AB=0.944;AC=15;AF=0.268;AN=56;BaseQRankSum=6.386;DP=1119;FS=1.601;HRun=0;HaplotypeScore=173.7643;InbreedingCoeff=0.4817;MQ=54.96;MQ0=37;MQRankSum=3.201;QD=8.62;ReadPosRankSum=1.397;VQSLOD=3.3575;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:37:22.34:0,22,296	0/0:16,2:18:2.90:0,3,466	0/0:95,0:29:13.38:0,13,288	0/0:90,0:25:30.08:0,30,397	1/1:9,22:29:60.14:695,60,0	1/1:6,19:26:50.35:555,50,0	1/1:9,15:26:35.27:361,35,0	0/0:27,0:31:9.22:0,9,178	1/1:13,22:36:30.72:795,31,0	0/1:39,5:46:57.12:57,0,1121	0/1:20,3:23:58.67:59,0,624	0/0:38,2:40:48.67:0,49,1238	0/0:54,4:57:31.24:0,31,1418	0/0:39,1:40:57.76:0,58,1369	0/0:47,5:52:22.72:0,23,1730	0/0:56,4:60:28.81:0,29,1851	0/0:29,0:29:17.71:0,18,171	0/0:23,0:22:17.91:0,18,129	0/0:31,1:30:3.27:0,3,278	0/0:28,0:28:26.82:0,27,270	0/1:97,0:93:9.27:9,0,455	0/0:21,0:20:10.05:0,10,564	0/1:14,0:14:6.34:6,0,349	0/0:49,2:50:2.49:0,2,1447	1/1:12,20:31:57.13:660,57,0	0/0:38,0:38:68.77:0,69,581	0/1:19,1:19:8.48:8,0,202	0/0:17,0:17:21.01:0,21,217
chr10	109746973	.	A	ACACACAC	7654.51	PASS	AB=0.691;AC=17;AF=0.304;AN=56;BaseQRankSum=-5.309;DP=1117;FS=0.357;HRun=0;HaplotypeScore=236.9867;InbreedingCoeff=0.5790;MQ=55.72;MQ0=57;MQRankSum=-5.138;QD=16.82;ReadPosRankSum=-1.875;VQSLOD=3.2681;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:36:27.64:619,0,28	0/0:15,0:15:39.12:0,39,777	0/1:93,0:25:12.15:12,0,699	0/0:96,0:30:57.98:0,58,753	0/0:29,0:28:65.31:0,65,862	0/0:29,0:30:64.54:0,65,1031	0/0:26,0:26:52.75:0,53,743	1/1:18,0:30:60.19:913,60,0	0/0:41,0:41:99:0,103,1530	0/0:43,0:43:99:0,111,1875	0/0:23,0:24:65.26:0,65,1193	0/0:36,0:36:97.57:0,98,2092	0/0:51,0:50:99:0,119,2257	0/0:44,0:44:99:0,117,2064	0/0:55,0:54:99:0,152,2958	0/0:56,0:56:99:0,144,2972	1/1:8,19:34:24.90:627,25,0	1/1:6,16:23:1.41:344,1,0	1/1:13,11:25:45.30:952,45,0	0/1:4,22:28:23.52:703,0,24	0/1:33,44:81:99:243,0,209	0/0:25,0:24:54.90:0,55,826	0/0:16,0:16:47.74:0,48,785	0/0:45,0:43:99:0,120,2521	0/0:28,0:28:62.39:0,62,856	1/1:9,27:38:15.62:2203,16,0	1/1:4,14:23:15.29:640,15,0	0/1:3,10:15:0.97:400,0,1
chr10	109748046	.	T	TAAAGACATAAAG	12063.45	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=15.016;DP=864;FS=20.486;HRun=0;HaplotypeScore=299.9701;InbreedingCoeff=0.9596;MQ=60.67;MQ0=0;MQRankSum=-15.077;QD=92.09;ReadPosRankSum=-4.811;VQSLOD=3.0723;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.19:0,66,2211	0/0:13,0:13:39.12:0,39,1270	0/0:10,0:10:13.54:0,14,302	0/0:7,0:6:3.89:0,4,36	1/1:13,10:28:55.64:1463,56,0	1/1:11,19:32:72.25:3297,72,0	1/1:12,9:23:45.11:1625,45,0	0/0:41,0:41:99:0,111,3351	1/1:16,15:30:81.67:3797,82,0	0/0:56,0:56:99:0,163,5541	0/0:27,0:27:78.27:0,78,2900	0/0:42,0:42:99:0,115,4017	0/0:45,0:45:99:0,129,4411	0/0:42,0:42:99:0,123,4155	0/0:46,0:46:99:0,138,4568	0/0:52,0:52:99:0,156,4947	0/0:25,0:25:71.37:0,71,2301	0/0:22,0:22:57.20:0,57,2156	0/0:15,0:14:20.90:0,21,1105	0/0:47,0:47:99:0,136,4820	0/0:52,0:52:99:0,145,5070	0/0:22,0:22:63.20:0,63,2217	0/0:24,0:24:69.22:0,69,2415	0/0:19,0:19:51:0,51,1675	1/1:11,6:17:45.15:1881,45,0	0/0:37,0:37:99:0,108,3473	0/0:50,0:49:99:0,147,5308	0/0:16,0:16:48.16:0,48,1585
chr10	109748052	.	C	CATAA	3833.85	PASS	AB=0.979;AC=6;AF=0.107;AN=56;BaseQRankSum=14.540;DP=875;FS=12.815;HRun=0;HaplotypeScore=187.2526;InbreedingCoeff=0.2644;MQ=60.09;MQ0=0;MQRankSum=-13.948;QD=31.43;ReadPosRankSum=-7.618;VQSLOD=0.4272;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:62.34:0,62,1220	0/0:14,0:14:42.12:0,42,788	0/0:12,0:12:23.90:0,24,378	0/0:7,0:6:15.03:0,15,203	0/1:24,0:24:29.50:529,0,29	0/1:30,0:29:13.63:1066,0,14	0/1:17,0:17:24.57:318,0,25	0/0:45,0:45:99:0,120,2171	0/1:29,3:32:27.67:1308,0,28	0/0:58,0:58:99:0,171,3293	0/0:28,0:28:84.25:0,84,1593	0/0:43,0:43:99:0,116,2276	0/0:40,0:40:99:0,116,2333	0/0:45,0:45:99:0,123,2387	0/0:44,0:44:99:0,132,2588	0/0:53,0:53:99:0,153,2869	0/0:21,0:21:60.07:0,60,1197	0/0:20,0:20:57.20:0,57,1138	0/0:14,0:13:39.05:0,39,657	0/0:52,0:52:99:0,146,2764	0/0:52,0:52:99:0,149,2817	0/0:25,0:25:72.22:0,72,1344	0/0:27,0:27:81.24:0,81,1511	0/0:17,0:17:45.15:0,45,898	1/1:17,1:18:30.19:613,30,0	0/0:41,0:41:99:0,114,2098	0/0:53,0:52:99:0,144,2835	0/0:19,0:19:57.14:0,57,987
chr10	109748313	.	C	CAT	16080.72	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-15.852;DP=964;FS=1.476;HRun=0;HaplotypeScore=168.4354;InbreedingCoeff=0.9682;MQ=59.49;MQ0=6;MQRankSum=-0.666;QD=34.14;ReadPosRankSum=0.682;VQSLOD=5.8785;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:31:21.07:384,21,0	0/0:16,0:16:45.12:0,45,607	0/0:9,0:4:5.70:0,6,29	0/0:12,0:6:5.69:0,6,49	1/1:9,23:32:38.87:628,39,0	1/1:5,17:22:36.11:625,36,0	1/1:6,9:15:24.08:440,24,0	1/1:6,43:50:99:2107,129,0	1/1:6,22:28:39.02:674,39,0	0/0:74,0:74:99:0,205,2823	0/0:34,0:34:99:0,102,1365	0/0:52,0:52:99:0,144,2034	0/0:56,0:56:99:0,162,2218	0/0:44,0:44:99:0,126,1741	0/0:45,0:45:99:0,129,1781	0/0:61,1:62:99:0,181,2553	1/1:3,29:32:53:1101,53,0	1/1:2,19:22:30.85:891,31,0	1/1:2,17:18:42.01:707,42,0	1/1:0,30:31:66.23:1209,66,0	1/1:8,26:33:54.09:989,54,0	0/0:40,0:40:99:0,117,1579	0/0:29,0:29:81.19:0,81,1079	0/0:20,0:20:51.17:0,51,726	1/1:3,14:17:24.06:407,24,0	1/1:6,56:59:99:2788,123,0	1/1:3,44:46:96.32:1758,96,0	1/1:0,29:29:75.26:1374,75,0
chr10	109748335	.	GATAC	G	1479.34	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.623;DP=959;FS=9.752;HRun=0;HaplotypeScore=254.5267;InbreedingCoeff=0.9630;MQ=57.18;MQ0=3;MQRankSum=-1.297;QD=13.57;ReadPosRankSum=-1.430;VQSLOD=1.7918;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:30:0,30,688	0/0:17,0:17:33.11:0,33,807	0/0:11,0:5:9.03:0,9,184	0/0:14,0:7:9.03:0,9,149	1/1:8,24:32:30.03:456,30,0	1/1:5,14:19:24.03:375,24,0	1/1:6,6:12:17.84:262,18,0	0/0:52,0:52:99:0,120,2638	1/1:9,21:30:26.97:354,27,0	0/0:69,0:69:99:0,166,4033	0/0:26,0:26:72.25:0,72,1676	0/0:51,0:51:84.53:0,85,3025	0/0:55,0:55:99:0,138,3261	0/0:42,0:42:99:0,108,2593	0/0:57,0:57:99:0,147,3665	0/0:63,0:63:99:0,172,4086	0/0:29,0:29:51.40:0,51,1144	0/0:26,0:26:35.17:0,35,1250	0/0:17,0:15:30.09:0,30,700	0/0:27,0:27:51.17:0,51,1273	0/0:32,0:32:56.97:0,57,1270	0/0:41,0:41:99:0,108,2592	0/0:28,0:28:69.24:0,69,1661	0/0:19,0:19:42.14:0,42,1047	1/1:8,8:16:12.03:204,12,0	0/0:55,1:55:87.53:0,88,3156	0/0:50,0:49:99:0,99,2291	0/0:31,0:31:63.22:0,63,1471
chr10	109748424	.	C	CACAT	19804.84	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=4.008;DP=1020;FS=5.983;HRun=0;HaplotypeScore=243.5354;InbreedingCoeff=0.9752;MQ=57.16;MQ0=0;MQRankSum=1.376;QD=37.58;ReadPosRankSum=2.113;VQSLOD=3.9667;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:34:29.46:556,29,0	0/0:12,0:12:36.12:0,36,719	0/0:13,0:10:29.77:0,30,488	0/0:16,0:14:33.11:0,33,569	1/1:8,43:53:93.31:2601,93,0	1/1:3,18:21:27.09:755,27,0	1/1:3,13:18:24.08:668,24,0	1/1:6,0:56:99:2386,138,0	1/1:11,30:41:42.11:981,42,0	0/0:81,0:81:99:0,235,4494	0/0:25,0:25:75.26:0,75,1497	0/0:49,0:49:99:0,132,2622	0/0:51,0:51:99:0,147,2765	0/0:43,0:43:99:0,123,2367	0/0:57,0:57:99:0,157,3046	0/0:55,1:56:81.62:0,82,3033	1/1:5,0:16:26.90:490,27,0	1/1:7,0:24:20.04:960,20,0	1/1:4,0:11:5.25:529,5,0	1/1:3,0:49:93.30:1705,93,0	1/1:8,0:34:60.27:1381,60,0	0/0:30,0:30:84.27:0,84,1595	0/0:42,0:42:99:0,117,2289	0/0:18,0:18:41.99:0,42,751	1/1:5,24:32:39.13:1091,39,0	1/1:19,0:70:99:3093,107,0	1/1:14,0:43:81.17:1728,81,0	1/1:5,0:24:9.74:880,10,0
chr10	109748531	.	A	ACATGCATG	304.64	PASS	AB=0.567;AC=8;AF=0.148;AN=54;BaseQRankSum=0.573;DP=1060;FS=0.000;HRun=0;HaplotypeScore=267.6664;InbreedingCoeff=0.7198;MQ=57.37;MQ0=1;MQRankSum=-2.520;QD=1.89;ReadPosRankSum=-0.921;VQSLOD=2.1008;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,108,2524	0/0:14,0:14:24.06:0,24,501	./.	0/0:15,0:7:3.01:0,3,37	0/1:10,21:34:0:0,0,0	1/1:7,21:29:3.13:26,3,0	1/1:22,5:27:5.11:140,5,0	0/0:46,0:46:48.16:0,48,1145	1/1:11,27:42:5.36:249,5,0	0/0:61,0:61:99:0,123,2921	0/0:23,0:23:57.20:0,57,1398	0/0:56,0:56:99:0,108,2622	0/0:46,0:46:99:0,117,2775	0/0:53,0:53:99:0,129,2991	0/0:57,0:57:99:0,117,2826	0/0:62,0:62:29.70:0,30,2918	0/0:17,0:17:33.11:0,33,796	0/0:25,0:25:63.22:0,63,1582	0/0:27,0:27:48.15:0,48,1016	0/0:37,0:37:69.22:0,69,1654	0/0:58,0:58:99:0,111,2547	0/0:37,0:37:96.32:0,96,2332	0/0:36,0:36:84.23:0,84,1895	0/0:32,0:32:72.15:0,72,1785	0/1:5,21:29:0:0,0,1	0/0:44,0:44:90.29:0,90,2138	0/0:47,0:47:90.22:0,90,1885	0/0:36,0:36:78.27:0,78,1904
chr10	109749164	.	CGTGTGTGTGT	C	3427.96	PASS	AC=40;AF=0.800;AN=50;BaseQRankSum=4.804;DP=580;FS=6.090;HRun=0;HaplotypeScore=160.8661;InbreedingCoeff=0.4836;MQ=62.95;MQ0=13;MQRankSum=-4.535;QD=7.52;ReadPosRankSum=2.896;VQSLOD=1.9684;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:36:6.49:141,6,0	0/0:2,0:2:3.01:0,3,41	./.	./.	1/1:10,1:12:0.30:0,0,0	1/1:6,0:8:6.02:140,6,0	1/1:21,0:26:3.01:70,3,0	0/0:12,0:10:0.31:0,0,1	1/1:19,0:29:14.58:348,15,0	0/0:16,0:16:5.05:0,5,50	0/0:9,0:10:6.02:0,6,186	1/1:18,2:27:18.05:393,18,0	1/1:17,3:20:11.40:254,11,0	1/1:16,11:27:12.04:309,12,0	1/1:15,11:27:21.07:582,21,0	0/0:19,0:22:33.11:0,33,1365	1/1:28,0:34:6.91:142,7,0	1/1:15,0:16:6.02:140,6,0	1/1:11,0:10:6.02:139,6,0	1/1:7,0:9:6.02:140,6,0	1/1:55,0:53:0.47:2,0,0	1/1:13,3:15:3.48:89,3,0	1/1:12,0:11:6.02:138,6,0	1/1:22,0:26:6.49:140,6,0	1/1:17,0:20:3.01:70,3,0	1/1:19,0:18:3.01:54,3,0	1/1:15,0:18:4.82:137,5,0	./.
chr10	109750230	.	GGTTT	G	1585.42	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=1.452;DP=482;FS=4.521;HRun=0;HaplotypeScore=95.3110;InbreedingCoeff=0.6609;MQ=57.57;MQ0=34;MQRankSum=-4.441;QD=17.42;ReadPosRankSum=3.396;VQSLOD=3.2928;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:24:59.29:0,59,781	0/0:10,0:10:26.99:0,27,377	0/0:36,0:10:23.01:0,23,242	0/0:38,0:11:22.57:0,23,178	1/1:10,0:11:26.11:259,26,0	1/1:8,3:14:41.89:437,42,0	1/1:14,3:18:47.65:517,48,0	0/0:30,0:29:71.70:0,72,692	1/1:7,1:9:27.04:320,27,0	0/0:19,0:16:42.48:0,42,702	0/0:12,0:9:1.05:0,1,242	0/0:15,0:14:3.49:0,3,195	0/0:11,0:10:8.13:0,8,96	0/0:17,0:16:4.27:0,4,141	0/0:19,0:18:11.85:0,12,270	0/0:18,0:18:48.80:0,49,647	0/0:25,0:20:31.98:0,32,438	0/0:19,0:18:47.85:0,48,496	0/0:19,0:15:44.90:0,45,401	0/0:7,0:8:12.87:0,13,194	0/0:10,0:8:17.94:0,18,141	0/1:11,0:11:16.65:17,0,117	0/1:11,0:11:20.53:21,0,77	0/0:12,0:9:7.40:0,7,70	1/1:7,3:10:20.54:192,21,0	0/0:21,0:21:51.62:0,52,502	0/0:14,0:13:27.76:0,28,356	0/0:9,0:9:14.99:0,15,166
chr10	109750259	.	CT	C	2725.54	PASS	AB=0.836;AC=27;AF=0.500;AN=54;BaseQRankSum=-1.806;DP=492;FS=11.611;HRun=8;HaplotypeScore=72.7336;InbreedingCoeff=0.7294;MQ=34.29;MQ0=75;MQRankSum=-3.460;QD=9.12;ReadPosRankSum=1.437;VQSLOD=0.8008;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,14:27:0.88:223,0,1	0/0:11,0:9:17.54:0,18,175	./.	0/0:10,1:3:0:0,0,0	1/1:4,3:7:2.99:29,3,0	1/1:8,4:11:8.98:87,9,0	1/1:18,7:19:13.44:229,13,0	1/1:14,13:25:33.79:367,34,0	1/1:6,9:14:20.77:202,21,0	0/0:16,0:13:17.75:0,18,203	0/0:17,0:12:23.97:0,24,236	0/0:17,0:16:34.28:0,34,364	0/0:17,0:15:18.05:0,18,216	0/0:17,0:14:21.53:0,22,223	0/0:15,0:13:18.98:0,19,192	0/0:24,0:23:48.95:0,49,549	1/1:15,12:20:8.94:186,9,0	0/1:15,6:15:4.58:149,0,5	1/1:12,8:14:18.49:224,18,0	1/1:6,10:15:29.77:288,30,0	1/1:9,2:5:2.97:29,3,0	0/0:15,0:14:19.24:0,19,184	0/0:8,0:7:18.01:0,18,200	0/0:19,0:15:14.47:0,14,164	1/1:7,7:10:24.04:230,24,0	1/1:15,9:21:23.67:230,24,0	1/1:6,19:22:44.27:432,44,0	0/1:17,0:15:10.81:22,0,11
chr10	109750887	.	A	AG	1746.95	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-8.367;DP=551;FS=0.534;HRun=7;HaplotypeScore=77.4241;InbreedingCoeff=0.9494;MQ=82.03;MQ0=0;MQRankSum=-1.684;QD=23.29;ReadPosRankSum=1.028;VQSLOD=3.7013;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,956	0/0:8,0:8:18.03:0,18,174	0/0:18,0:18:38.64:0,39,357	0/0:12,0:11:12.01:0,12,140	1/1:3,8:11:15.05:181,15,0	1/1:4,15:19:36.11:435,36,0	1/1:4,17:21:45.14:544,45,0	0/0:29,0:29:69.07:0,69,666	1/1:1,12:13:33.10:399,33,0	0/0:22,0:22:60.08:0,60,579	0/0:3,0:3:6.01:0,6,58	0/0:29,0:29:75.11:0,75,724	0/0:13,0:13:36.04:0,36,341	0/0:25,0:25:63.09:0,63,608	0/0:42,0:42:99:0,126,1211	0/0:22,0:22:48.07:0,48,464	0/0:26,0:26:75.10:0,75,718	0/0:39,0:39:93.06:0,93,890	0/0:18,0:18:39:0,39,372	0/0:12,0:12:30.01:0,30,284	0/0:31,0:31:81.09:0,81,782	0/0:5,0:5:12.01:0,12,110	0/0:6,0:6:12.01:0,12,116	0/0:19,0:19:54.07:0,54,515	1/1:1,10:11:30.09:362,30,0	0/0:24,0:24:63.05:0,63,608	0/0:19,0:19:54.07:0,54,521	0/0:17,0:17:45.03:0,45,422
chr10	109752529	.	T	TG	3174.88	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-9.602;DP=645;FS=2.485;HRun=5;HaplotypeScore=63.6082;InbreedingCoeff=0.9906;MQ=79.18;MQ0=1;MQRankSum=-0.345;QD=29.13;ReadPosRankSum=1.059;VQSLOD=4.1481;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,1086	0/0:5,0:5:15.04:0,15,161	0/0:18,0:18:44.98:0,45,441	0/0:18,0:18:21.88:0,22,295	1/1:3,13:16:33.06:410,33,0	1/1:1,18:19:51.17:671,51,0	1/1:5,31:36:75.24:987,75,0	0/0:40,0:39:96.19:0,96,1011	1/1:4,19:23:63.17:809,63,0	0/0:17,0:17:45.10:0,45,477	0/0:5,0:5:15.04:0,15,159	0/0:35,0:35:96.21:0,96,1021	0/0:27,0:27:75.18:0,75,805	0/0:53,0:53:99:0,144,1536	0/0:35,0:35:99:0,102,1094	0/0:31,0:31:84.19:0,84,895	0/0:31,0:31:84.19:0,84,892	0/0:21,0:21:60.15:0,60,645	0/0:25,0:25:69.14:0,69,721	0/0:12,0:12:33.08:0,33,353	0/0:36,0:35:79.73:0,80,832	0/0:15,0:15:45.11:0,45,483	0/0:7,0:7:21.05:0,21,224	0/0:17,0:17:51.08:0,51,527	1/1:0,15:15:36.12:473,36,0	0/0:14,0:14:42.11:0,42,449	0/0:26,0:26:69.13:0,69,723	0/0:10,0:10:30.08:0,30,322
chr10	109753066	.	CTCTTTTTTTTTTT	C	7148.42	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=3.709;DP=470;FS=2.920;HRun=0;HaplotypeScore=181.5461;InbreedingCoeff=0.7566;MQ=65.49;MQ0=11;MQRankSum=-7.304;QD=33.72;ReadPosRankSum=3.282;VQSLOD=4.5212;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:44.07:0,44,2136	0/0:6,0:6:14.56:0,15,732	0/0:33,0:15:17.39:0,17,449	0/1:26,0:9:14.30:14,0,83	1/1:17,0:16:20.19:247,20,0	0/1:14,0:14:97.79:505,0,98	1/1:13,0:13:9.03:246,9,0	0/0:21,0:21:24.71:0,25,600	1/1:9,0:8:3.01:96,3,0	0/0:18,0:17:39.05:0,39,1630	0/0:9,0:9:11.99:0,12,539	1/1:27,0:27:40.33:686,40,0	1/1:19,0:19:37.12:1206,37,0	1/1:25,1:26:37.43:1344,37,0	1/1:23,0:23:42.14:1386,42,0	0/0:22,0:22:12.26:0,12,405	0/0:20,0:20:29.37:0,29,1347	0/0:8,0:7:15.04:0,15,579	0/0:20,0:20:26.82:0,27,729	0/0:14,0:14:24:0,24,872	0/0:12,0:11:6.81:0,7,508	1/1:13,2:14:19.81:517,20,0	1/1:7,2:9:16.57:415,17,0	1/1:7,0:7:11.78:295,12,0	1/1:7,0:7:5.61:190,6,0	0/0:15,0:15:24.04:0,24,857	0/0:22,0:21:26.82:0,27,785	0/0:7,0:7:5.62:0,6,53
chr10	109753068	.	CT	C	3569.64	PASS	AB=0.799;AC=39;AF=0.696;AN=56;BaseQRankSum=4.233;DP=491;FS=0.000;HRun=12;HaplotypeScore=106.8113;InbreedingCoeff=0.4409;MQ=62.82;MQ0=16;MQRankSum=-0.851;QD=8.88;ReadPosRankSum=5.906;VQSLOD=2.5741;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,11:30:17.97:338,18,0	0/0:9,0:9:16.78:0,17,137	0/0:33,0:14:9.43:0,9,105	0/1:25,0:8:13.69:35,0,14	0/0:11,0:15:6.64:0,7,33	0/1:9,1:14:22.03:31,0,22	0/0:8,0:13:4.67:0,5,69	1/1:14,7:21:26.75:190,27,0	0/1:6,1:7:0.62:1,0,15	0/0:17,0:17:27.26:0,27,226	0/1:12,2:14:3.92:4,0,47	1/1:16,11:27:33.02:300,33,0	1/1:2,17:19:40.65:282,41,0	1/1:12,12:25:37.78:344,38,0	1/1:7,16:23:41.31:289,41,0	1/1:9,16:24:11.72:93,12,0	1/1:14,9:22:44.59:329,45,0	1/1:8,3:10:3.90:79,4,0	1/1:9,10:18:8.81:191,9,0	1/1:11,3:14:23.18:157,23,0	0/1:8,5:11:15.16:76,0,15	1/1:8,6:14:19.79:128,20,0	1/1:3,6:9:17.84:126,18,0	1/1:2,3:7:10.01:55,10,0	0/1:6,0:7:1.23:1,0,29	0/1:10,9:19:10.45:152,0,10	1/1:15,8:22:32.84:254,33,0	1/1:6,2:7:14.94:116,15,0
chr10	109753081	.	CTTTTTTTTTTTT	C	6681.83	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=6.184;DP=483;FS=5.899;HRun=17;HaplotypeScore=165.3738;InbreedingCoeff=0.8199;MQ=47.10;MQ0=37;MQRankSum=-7.540;QD=42.29;ReadPosRankSum=5.443;VQSLOD=0.6452;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:92.18:0,92,3533	0/0:7,0:9:21.07:0,21,1057	0/0:22,0:5:15.05:0,15,417	0/0:19,0:6:6.96:0,7,77	1/1:11,0:10:3.50:96,4,0	0/1:11,0:9:85.13:371,0,85	1/1:6,0:5:9.03:193,9,0	0/0:18,0:19:45.82:0,46,1475	1/1:3,0:1:3.01:78,3,0	0/0:22,0:21:63.10:0,63,2405	0/0:12,0:15:30.06:0,30,1210	1/1:17,6:23:37.95:715,38,0	1/1:10,12:21:30.24:1164,30,0	1/1:14,10:24:53.56:1295,54,0	1/1:6,13:19:50.97:1368,51,0	0/0:24,0:23:33.56:0,34,1181	0/0:28,0:25:47.93:0,48,1714	0/0:16,0:16:36.08:0,36,1446	0/0:23,0:20:41.32:0,41,1259	0/0:17,0:17:33.09:0,33,1304	0/0:12,0:8:11.55:0,12,570	1/1:6,7:10:17.94:491,18,0	1/1:4,6:9:17.88:411,18,0	1/1:8,3:10:17.85:345,18,0	1/1:4,0:3:5.24:154,5,0	0/0:19,0:16:45.13:0,45,1786	0/0:20,0:20:33.30:0,33,1071	0/0:10,0:7:9.01:0,9,197
chr10	109753084	.	T	TTC	3205.62	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-5.730;DP=499;FS=3.863;HRun=0;HaplotypeScore=120.0385;InbreedingCoeff=0.7865;MQ=43.50;MQ0=42;MQRankSum=2.706;QD=14.31;ReadPosRankSum=-2.688;VQSLOD=2.6333;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,13:42:68.25:852,68,0	0/0:9,0:9:21.85:0,22,200	0/0:22,0:5:7.77:0,8,57	0/0:20,0:4:2.36:0,2,13	0/0:9,0:8:0.05:0,0,38	0/0:9,0:7:17.39:0,17,118	0/0:7,0:6:8.65:0,9,46	1/1:10,9:19:39.59:439,40,0	0/0:3,0:1:2.88:0,3,15	0/0:22,0:21:62.49:0,62,466	0/0:18,0:16:29.67:0,30,216	0/0:24,0:24:26.69:0,27,267	0/0:23,0:22:50.52:0,51,340	0/0:26,0:25:43.76:0,44,345	0/0:19,0:19:49.79:0,50,310	0/0:25,0:24:33.31:0,33,349	1/1:17,11:28:4.40:423,4,0	1/1:13,6:16:0.38:218,0,0	1/1:21,2:20:39.42:327,39,0	1/1:14,9:21:21.28:263,21,0	1/1:9,3:8:7:128,7,0	0/0:14,0:11:17.71:0,18,112	0/0:10,0:9:20.33:0,20,123	0/0:12,0:10:17.41:0,17,116	0/0:3,0:2:5.75:0,6,30	1/1:16,5:17:33.92:413,34,0	1/1:16,6:22:15.76:251,16,0	1/1:6,2:4:8.97:87,9,0
chr10	109753085	.	T	TC	1778.53	PASS	AB=0.982;AC=19;AF=0.339;AN=56;BaseQRankSum=-1.781;DP=521;FS=9.984;HRun=0;HaplotypeScore=127.8049;InbreedingCoeff=0.5696;MQ=42.73;MQ0=43;MQRankSum=1.486;QD=7.29;ReadPosRankSum=-2.880;VQSLOD=2.5361;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:45,0:42:32.76:376,33,0	0/0:9,0:9:21.85:0,22,190	0/0:22,0:5:7.57:0,8,51	0/0:20,0:4:1.54:0,2,12	0/0:16,0:14:2.93:0,3,11	0/1:13,0:11:0.19:0,0,61	0/0:11,0:10:4.38:0,4,20	1/1:18,0:18:28.14:262,28,0	0/1:7,0:5:1.56:2,0,3	0/0:23,0:21:62.51:0,63,466	0/0:18,0:16:32.75:0,33,251	0/0:22,0:22:26.49:0,26,250	0/0:22,0:21:51.17:0,51,291	0/0:26,0:25:41.67:0,42,294	0/0:18,0:18:47.10:0,47,232	0/0:26,0:25:35.75:0,36,346	0/1:31,0:28:22.41:193,0,22	0/1:19,1:17:15.46:100,0,15	1/1:19,3:19:36.84:315,37,0	0/1:23,1:22:5.80:130,0,6	1/1:12,0:8:6.87:78,7,0	0/0:14,0:11:16.80:0,17,82	0/0:10,0:9:19.71:0,20,102	0/0:12,0:10:14.11:0,14,90	0/0:8,0:7:4.06:0,4,15	1/1:21,1:18:14.19:230,14,0	1/1:20,1:20:31.95:217,32,0	1/1:9,0:5:8.76:59,9,0
chr10	109753288	.	AG	A	11023.61	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=3.195;DP=612;FS=5.055;HRun=9;HaplotypeScore=67.7762;InbreedingCoeff=0.9844;MQ=71.07;MQ0=0;MQRankSum=-2.600;QD=21.45;ReadPosRankSum=2.779;VQSLOD=5.8970;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,37:39:96.05:879,96,0	0/0:10,0:10:18.05:0,18,208	0/0:9,0:7:11.76:0,12,107	0/0:19,0:17:32.68:0,33,252	1/1:1,26:27:63.50:577,64,0	1/1:4,16:20:45.02:412,45,0	1/1:0,20:20:51.03:467,51,0	1/1:7,12:19:36.88:326,37,0	1/1:1,13:14:22.41:313,22,0	0/0:16,0:16:42.12:0,42,485	0/0:17,0:17:33.03:0,33,364	1/1:2,27:29:72.03:659,72,0	1/1:3,22:25:63.03:576,63,0	1/1:6,16:22:42.01:383,42,0	1/1:4,25:29:66.03:604,66,0	0/0:27,0:27:75.20:0,75,846	1/1:3,31:34:80.91:728,81,0	1/1:0,21:21:48.03:439,48,0	1/1:6,8:14:27.01:247,27,0	1/1:3,15:18:36.01:330,36,0	1/1:1,19:20:51.03:467,51,0	1/1:0,20:20:51.03:466,51,0	1/1:0,19:19:48.03:439,48,0	1/1:4,31:35:81.03:741,81,0	1/1:1,19:20:48.02:439,48,0	1/1:4,27:31:46.43:679,46,0	1/1:1,33:33:81.01:741,81,0	1/1:0,4:4:12.01:110,12,0
chr10	109753856	.	A	AAATC	41609.17	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-11.936;DP=757;FS=0.000;HRun=0;HaplotypeScore=114.7489;InbreedingCoeff=0.9967;MQ=80.93;MQ0=0;MQRankSum=-10.575;QD=65.94;ReadPosRankSum=1.749;VQSLOD=7.0452;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,26:34:75.21:1938,75,0	0/0:5,0:5:15.05:0,15,280	0/0:22,0:22:59.79:0,60,1074	0/0:25,0:25:66.60:0,67,1177	1/1:6,19:26:54.18:1379,54,0	1/1:2,11:13:39.05:919,39,0	1/1:11,25:36:87.30:2261,87,0	1/1:9,25:34:90.29:2234,90,0	1/1:3,17:21:51.01:1277,51,0	0/0:26,0:26:78.24:0,78,1419	0/0:15,0:15:45.15:0,45,839	1/1:7,34:42:99:2646,105,0	1/1:5,30:37:87:2253,87,0	1/1:7,27:34:90.27:2292,90,0	1/1:5,39:45:99:3313,126,0	0/0:33,0:33:96.33:0,96,1792	1/1:1,23:24:69.24:1839,69,0	1/1:4,17:21:54.19:1421,54,0	1/1:5,13:20:57.17:1366,57,0	1/1:0,18:18:51.13:1297,51,0	1/1:8,38:46:99:3009,120,0	1/1:0,20:21:54.14:1379,54,0	1/1:4,14:19:51.09:1218,51,0	1/1:5,22:28:60.63:1537,61,0	1/1:3,31:34:90.31:2344,90,0	1/1:7,30:37:55.35:2652,55,0	1/1:0,29:30:84.29:2237,84,0	1/1:0,10:10:30.10:800,30,0
chr10	109754773	.	GGAGCTC	G	10853.75	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=16.336;DP=680;FS=12.483;HRun=0;HaplotypeScore=152.9647;InbreedingCoeff=0.9882;MQ=75.39;MQ0=0;MQRankSum=-17.777;QD=55.10;ReadPosRankSum=3.696;VQSLOD=4.3043;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,3614	0/0:16,0:16:45.15:0,45,1578	0/0:24,0:24:60.21:0,60,1974	0/0:26,0:25:66.17:0,66,2136	0/0:14,0:14:27.09:0,27,958	0/0:23,0:23:69.22:0,69,2309	0/0:22,0:22:63.20:0,63,2045	0/0:42,0:42:99:0,114,3846	0/0:23,0:23:69.22:0,69,2349	0/0:22,0:22:63.22:0,63,2076	0/0:17,0:17:45.14:0,45,1471	1/1:4,32:36:83.89:1980,84,0	1/1:2,47:49:99:2769,120,0	1/1:0,36:36:96.33:2259,96,0	1/1:2,34:36:93.15:2157,93,0	0/0:34,0:34:99:0,99,3429	0/0:28,0:28:84.29:0,84,2932	0/0:16,0:16:48.12:0,48,1616	0/0:18,0:18:51.17:0,51,1760	0/0:17,0:17:33.11:0,33,1151	0/0:31,0:31:81.28:0,81,2858	1/1:1,6:7:12.04:282,12,0	1/1:2,14:17:33.11:768,33,0	1/1:2,14:16:27.56:638,28,0	0/0:5,0:5:12.04:0,12,395	0/0:21,0:21:57.20:0,57,1915	0/0:37,0:37:99:0,108,3797	0/0:10,0:10:27.09:0,27,962
chr10	109755110	.	TATC	T	7669.66	PASS	AB=1.000;AC=55;AF=0.982;AN=56;BaseQRankSum=1.436;DP=535;FS=6.049;HRun=0;HaplotypeScore=461.0047;InbreedingCoeff=-0.0147;MQ=53.66;MQ0=0;MQRankSum=-0.622;QD=14.34;ReadPosRankSum=1.052;VQSLOD=3.9967;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,2:25:53.47:300,53,0	1/1:9,0:9:24.21:124,24,0	1/1:7,0:7:16.93:93,17,0	0/1:9,0:9:3.20:79,0,3	1/1:17,3:20:52.50:351,52,0	1/1:17,0:17:42.09:220,42,0	1/1:17,1:18:46.04:247,46,0	1/1:29,3:31:72.54:536,73,0	1/1:15,1:16:39.23:228,39,0	1/1:28,0:28:66.71:466,67,0	1/1:11,1:12:32.58:184,33,0	1/1:45,2:47:99:710,128,0	1/1:19,1:20:52.27:295,52,0	1/1:22,1:22:55.52:320,56,0	1/1:29,1:30:84.80:490,85,0	1/1:30,2:31:79.40:473,79,0	1/1:20,1:20:37.25:246,37,0	1/1:17,0:17:40.70:267,41,0	1/1:11,2:12:32.88:236,33,0	1/1:17,2:18:43.10:258,43,0	1/1:8,1:8:14.58:68,15,0	1/1:4,1:5:11.06:68,11,0	1/1:10,0:10:23.54:125,24,0	1/1:20,0:19:31.06:145,31,0	1/1:18,0:18:52.31:302,52,0	1/1:25,0:25:68.12:392,68,0	1/1:20,0:20:47.11:248,47,0	1/1:12,0:12:34.41:200,34,0
chr10	109755119	.	T	TA	14906.42	PASS	AB=0.875;AC=54;AF=0.964;AN=56;BaseQRankSum=2.718;DP=611;FS=9.132;HRun=3;HaplotypeScore=485.4455;InbreedingCoeff=-0.0380;MQ=47.90;MQ0=0;MQRankSum=-2.921;QD=24.40;ReadPosRankSum=2.100;VQSLOD=0.3281;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,23:29:63.43:620,63,0	1/1:1,10:11:30.50:299,30,0	0/1:5,1:7:11.33:101,0,11	0/1:6,1:7:50.50:66,0,50	1/1:6,15:21:39.44:334,39,0	1/1:1,18:19:53.91:534,54,0	1/1:4,16:20:54.41:524,54,0	1/1:10,27:34:86.73:898,87,0	1/1:4,17:21:53.92:525,54,0	1/1:7,27:34:95.75:960,96,0	1/1:3,11:14:33.39:301,33,0	1/1:6,47:53:99:1467,147,0	1/1:0,19:20:60.02:599,60,0	1/1:4,31:34:91.11:861,91,0	1/1:5,30:35:99:952,100,0	1/1:6,28:33:91.81:886,92,0	1/1:5,18:23:55.98:560,56,0	1/1:1,16:17:42.98:481,43,0	1/1:4,11:14:32.24:325,32,0	1/1:3,13:16:36:361,36,0	1/1:3,10:12:26.85:232,27,0	1/1:1,3:4:8.98:80,9,0	1/1:2,11:13:28.71:251,29,0	1/1:5,18:22:42.10:348,42,0	1/1:5,16:21:56.27:515,56,0	1/1:5,23:28:75.03:765,75,0	1/1:9,18:27:71.68:674,72,0	1/1:0,12:12:36.07:387,36,0
chr10	109755124	.	C	CCA	23623.92	PASS	AB=0.818;AC=54;AF=0.964;AN=56;BaseQRankSum=1.850;DP=601;FS=2.097;HRun=0;HaplotypeScore=456.4716;InbreedingCoeff=-0.0178;MQ=43.56;MQ0=0;MQRankSum=-2.955;QD=39.31;ReadPosRankSum=2.706;VQSLOD=1.9663;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:26:66.22:1033,66,0	1/1:0,10:10:30.10:479,30,0	0/1:3,2:7:29.39:194,0,29	0/1:3,0:3:10.66:16,0,11	1/1:6,14:20:36.59:579,37,0	1/1:4,16:20:54.17:821,54,0	1/1:5,16:21:54.18:838,54,0	1/1:18,25:39:93.26:1358,93,0	1/1:6,16:22:54.18:861,54,0	1/1:3,31:34:96.22:1452,96,0	1/1:3,11:14:36.59:566,37,0	1/1:10,44:55:99:2266,144,0	1/1:3,17:20:54.18:849,54,0	1/1:4,30:33:99:1561,99,0	1/1:2,32:34:96.33:1528,96,0	1/1:6,27:32:87.30:1387,87,0	1/1:5,15:21:57.15:860,57,0	1/1:7,11:18:42.09:612,42,0	1/1:1,12:12:33.09:487,33,0	1/1:4,12:16:39.13:602,39,0	1/1:3,8:10:27.09:442,27,0	1/1:1,2:3:6.49:91,6,0	1/1:4,10:14:33.11:538,33,0	1/1:4,17:20:38.90:579,39,0	1/1:2,17:19:51.17:812,51,0	1/1:2,23:25:72.24:1149,72,0	1/1:6,21:28:72.25:1194,72,0	1/1:4,10:14:30.10:472,30,0
chr10	109755131	.	T	TC	17419.32	PASS	AB=0.875;AC=53;AF=0.946;AN=56;BaseQRankSum=1.946;DP=561;FS=0.000;HRun=0;HaplotypeScore=402.2042;InbreedingCoeff=0.4021;MQ=47.59;MQ0=0;MQRankSum=-4.208;QD=31.27;ReadPosRankSum=1.511;VQSLOD=2.3602;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:23:44.92:539,45,0	1/1:0,9:9:27.09:367,27,0	0/1:6,1:7:29.94:30,0,138	0/0:4,0:4:3:0,3,29	1/1:1,17:18:38.89:391,39,0	1/1:1,16:17:51.16:667,51,0	1/1:5,19:24:56.88:624,57,0	1/1:5,33:33:93.23:1260,93,0	1/1:0,16:16:45.11:522,45,0	1/1:2,31:33:92.40:1255,92,0	1/1:1,14:15:44.86:441,45,0	1/1:4,47:51:99:1665,138,0	1/1:4,16:20:54.10:660,54,0	1/1:5,32:36:99:1244,105,0	1/1:3,31:34:99:1171,99,0	1/1:2,28:29:87.24:1033,87,0	1/1:1,17:17:44.92:507,45,0	1/1:1,10:11:27.09:367,27,0	1/1:2,12:14:39.08:532,39,0	1/1:1,14:15:38.79:386,39,0	1/1:2,7:8:15.04:188,15,0	1/1:1,2:3:3:31,3,0	1/1:1,13:14:32.89:337,33,0	1/1:3,14:16:14.75:154,15,0	1/1:2,18:20:54.14:642,54,0	1/1:3,23:26:78.22:1072,78,0	1/1:1,24:25:69.20:819,69,0	1/1:3,9:12:36.12:513,36,0
chr10	109755134	.	AG	A	12382.09	PASS	AB=0.889;AC=54;AF=0.964;AN=56;BaseQRankSum=1.680;DP=578;FS=0.000;HRun=3;HaplotypeScore=422.6611;InbreedingCoeff=-0.0393;MQ=47.74;MQ0=0;MQRankSum=-4.173;QD=21.42;ReadPosRankSum=1.342;VQSLOD=2.0157;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:25:47.77:413,48,0	1/1:3,8:11:29.86:255,30,0	0/1:5,2:7:47.96:48,0,165	0/1:4,0:4:29.64:30,0,30	1/1:2,16:18:38.87:330,39,0	1/1:3,15:18:47.80:409,48,0	1/1:4,20:24:49.96:482,50,0	1/1:6,33:34:83.73:871,84,0	1/1:1,15:16:41.89:356,42,0	1/1:1,33:34:96.04:993,96,0	1/1:0,15:15:43.62:356,44,0	1/1:7,45:52:99:1130,134,0	1/1:6,15:21:50.72:431,51,0	1/1:10,28:37:89.58:739,90,0	1/1:5,30:35:98.39:791,98,0	1/1:0,30:30:83.79:706,84,0	1/1:1,17:17:39.35:339,39,0	1/1:2,10:12:26.98:256,27,0	1/1:0,14:14:39.05:420,39,0	1/1:3,14:17:44.91:403,45,0	1/1:4,6:9:14.94:120,15,0	1/1:0,3:3:2.98:21,3,0	1/1:0,14:14:32.81:277,33,0	1/1:2,15:16:18.08:136,18,0	1/1:0,21:21:50.76:415,51,0	1/1:4,23:27:69.16:737,69,0	1/1:1,24:25:68.87:586,69,0	1/1:4,8:12:33.02:331,33,0
chr10	109755619	.	T	TG	679.60	PASS	AB=0.615;AC=11;AF=0.196;AN=56;BaseQRankSum=8.611;DP=623;FS=16.205;HRun=0;HaplotypeScore=70.9064;InbreedingCoeff=0.5752;MQ=56.58;MQ0=8;MQRankSum=-6.437;QD=3.78;ReadPosRankSum=7.548;VQSLOD=1.3871;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:60.97:0,61,394	0/0:5,0:5:14.99:0,15,130	0/0:33,0:10:16.02:0,16,154	0/0:21,0:5:8.15:0,8,63	0/0:23,0:23:61.05:0,61,469	0/0:19,0:19:52.37:0,52,408	0/0:17,0:17:48.15:0,48,346	0/0:28,0:28:69.24:0,69,499	0/0:20,0:20:56.81:0,57,480	0/0:23,0:23:61.56:0,62,592	0/0:16,0:16:43.54:0,44,405	0/1:16,19:34:55.95:134,0,56	0/1:6,22:28:40.84:118,0,41	0/1:13,16:27:41.41:106,0,41	1/1:24,1:25:12.81:189,13,0	0/0:28,0:28:71.87:0,72,594	0/0:18,0:18:29.13:0,29,240	0/0:17,0:16:41.76:0,42,306	0/0:18,0:18:50.92:0,51,389	0/0:26,0:26:64.71:0,65,427	0/0:20,0:20:45.74:0,46,337	1/1:0,19:19:15.40:85,15,0	1/1:3,25:28:24.28:182,24,0	1/1:1,13:15:1.78:26,2,0	0/0:19,0:19:44.45:0,44,424	0/0:27,0:27:74.16:0,74,585	0/0:32,0:32:44.02:0,44,334	0/0:9,0:9:18.89:0,19,135
chr10	109755624	.	T	TG	718.54	PASS	AB=0.915;AC=9;AF=0.161;AN=56;BaseQRankSum=8.394;DP=623;FS=13.722;HRun=0;HaplotypeScore=69.6961;InbreedingCoeff=0.3032;MQ=55.68;MQ0=7;MQRankSum=-2.763;QD=4.01;ReadPosRankSum=3.658;VQSLOD=2.0076;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:66.54:0,67,423	0/0:5,0:5:14.98:0,15,129	0/0:29,0:9:22.80:0,23,164	0/0:18,0:3:1.82:0,2,10	0/0:21,0:21:48.87:0,49,357	0/0:18,0:18:49.05:0,49,365	0/0:18,0:18:49.43:0,49,364	0/0:27,0:27:66.72:0,67,485	0/0:20,0:20:56.69:0,57,471	0/0:24,0:24:59.94:0,60,553	0/0:15,0:15:44.44:0,44,395	0/1:36,0:35:99:239,0,129	0/1:29,0:29:37.35:117,0,37	0/1:26,1:25:32.52:168,0,33	0/1:17,8:26:17.53:18,0,192	0/0:31,0:31:74.74:0,75,604	0/0:18,0:18:26.14:0,26,215	0/0:16,0:15:39.61:0,40,277	0/0:19,0:19:48.71:0,49,361	0/0:24,0:24:55.57:0,56,343	0/0:22,0:22:47.15:0,47,350	0/1:16,0:18:11.78:86,0,12	1/1:24,1:26:20.82:168,21,0	1/1:16,0:16:8.26:71,8,0	0/0:21,0:21:44.15:0,44,413	0/0:28,0:28:75.54:0,76,576	0/0:34,0:34:49.85:0,50,379	0/0:10,0:10:23.95:0,24,164
chr10	109757415	.	T	TTTA	11703.78	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.414;DP=816;FS=2.202;HRun=0;HaplotypeScore=117.9810;InbreedingCoeff=0.9985;MQ=82.98;MQ0=2;MQRankSum=-4.907;QD=52.02;ReadPosRankSum=4.027;VQSLOD=7.0344;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,2345	0/0:13,0:13:36.11:0,36,562	0/0:27,0:27:72.22:0,72,1127	0/0:21,0:21:54.08:0,54,761	0/0:28,0:28:72.23:0,72,1148	0/0:21,0:21:60.20:0,60,980	0/0:34,0:34:99:0,99,1617	0/0:38,0:38:96.32:0,96,1542	0/0:29,0:29:78.24:0,78,1248	0/0:30,0:30:78.23:0,78,1185	0/0:23,0:23:57.19:0,57,931	1/1:1,40:41:99:2409,108,0	1/1:4,25:29:75.26:1639,75,0	1/1:5,26:32:75.26:1671,75,0	1/1:7,32:40:87.30:1941,87,0	0/0:41,0:41:99:0,117,1804	0/0:42,0:42:99:0,120,1949	0/0:25,0:25:75.20:0,75,1170	0/0:24,0:24:63.21:0,63,1024	0/0:19,0:19:54.18:0,54,879	0/0:31,0:29:81.25:0,81,1294	1/1:4,23:28:63.22:1379,63,0	1/1:4,19:25:51.17:1056,51,0	1/1:1,28:30:72.25:1608,72,0	0/0:15,0:15:42.14:0,42,686	0/0:34,0:34:99:0,99,1570	0/0:39,0:39:99:0,114,1860	0/0:7,0:7:18.06:0,18,290
chr10	109758995	.	A	ATT	4561.03	PASS	AB=0.827;AC=22;AF=0.393;AN=56;BaseQRankSum=-4.693;DP=610;FS=63.347;HRun=2;HaplotypeScore=137.5689;InbreedingCoeff=0.1489;MQ=62.43;MQ0=4;MQRankSum=-1.151;QD=13.34;ReadPosRankSum=5.738;VQSLOD=-0.3952;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:4.03:49,0,4	0/0:17,0:17:48.13:0,48,623	0/0:35,0:18:7.86:0,8,382	0/0:24,0:18:1.50:0,1,372	0/1:7,0:20:18.06:90,0,18	0/1:23,0:23:0.44:0,0,117	0/0:14,0:15:14.76:0,15,94	1/1:3,14:18:45.60:715,46,0	0/0:12,0:12:7.87:0,8,55	0/0:29,0:29:66.17:0,66,879	0/0:18,0:18:39.07:0,39,509	0/0:7,0:28:10.76:0,11,46	0/0:24,0:24:11.37:0,11,64	0/0:29,0:29:16.29:0,16,91	0/1:32,0:32:40.40:77,0,40	0/0:36,0:36:87.21:0,87,1170	1/1:12,5:18:8.02:530,8,0	0/1:5,11:16:7.23:377,0,7	1/1:5,9:15:12.43:366,12,0	1/1:11,0:11:18.06:245,18,0	0/1:7,12:19:26.01:26,0,35	0/1:14,0:14:5.21:24,0,5	0/1:10,0:10:7.18:41,0,7	0/1:16,0:16:18.68:19,0,41	0/1:13,0:14:4.58:5,0,30	0/1:11,23:34:66.57:1074,0,67	0/1:11,18:29:15.55:490,0,16	1/1:6,15:23:15.12:435,15,0
chr10	109758997	.	T	TTTAA	7447.19	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=2.528;DP=691;FS=7.324;HRun=0;HaplotypeScore=198.7393;InbreedingCoeff=0.6333;MQ=62.10;MQ0=5;MQRankSum=-3.778;QD=15.51;ReadPosRankSum=-2.605;VQSLOD=2.8574;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:33:8.90:112,9,0	0/0:15,0:17:48.07:0,48,632	0/0:39,0:19:6.23:0,6,359	0/1:29,0:21:24.67:25,0,406	0/1:17,0:20:71.54:72,0,83	0/0:22,0:23:10.02:0,10,225	0/0:13,0:17:28.57:0,29,247	1/1:24,0:24:51.09:837,51,0	0/0:13,0:13:14.32:0,14,184	0/0:25,0:28:70.91:0,71,941	0/0:18,0:22:6.99:0,7,502	1/1:32,0:32:26.52:162,27,0	1/1:28,0:28:39.45:240,39,0	1/1:31,0:31:44.87:246,45,0	1/1:36,0:36:47.53:421,48,0	0/0:35,0:38:84.80:0,85,1351	1/1:22,0:22:47.88:771,48,0	1/1:20,0:20:31.63:572,32,0	1/1:14,0:12:27.20:357,27,0	1/1:5,1:22:39.39:457,39,0	1/1:18,0:18:8.37:76,8,0	0/1:17,0:17:2.18:50,0,2	1/1:14,0:14:19.24:192,19,0	1/1:19,0:19:11.25:62,11,0	0/0:13,0:13:2.01:0,2,39	0/1:37,0:37:36.20:1207,0,36	1/1:38,0:38:65.48:863,65,0	1/1:24,0:25:47.84:726,48,0
chr10	109759996	.	GT	G	2600.78	PASS	AB=0.933;AC=15;AF=0.268;AN=56;BaseQRankSum=10.485;DP=792;FS=4.017;HRun=13;HaplotypeScore=89.3241;InbreedingCoeff=0.8847;MQ=68.42;MQ0=0;MQRankSum=0.535;QD=10.97;ReadPosRankSum=4.089;VQSLOD=3.6053;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,1:39:71.22:0,71,795	0/0:8,0:8:21.02:0,21,196	0/1:26,2:16:32.99:69,0,33	0/0:12,0:11:13.32:0,13,87	0/0:30,1:32:38.29:0,38,591	0/0:26,0:26:48.07:0,48,464	0/0:20,2:22:26.15:0,26,409	0/0:33,2:35:14.40:0,14,522	0/0:32,0:32:77.95:0,78,712	0/0:25,1:28:36.57:0,37,492	0/0:18,0:21:40.36:0,40,440	1/1:7,25:34:63.64:449,64,0	1/1:5,27:34:37.82:407,38,0	1/1:8,30:38:77.46:568,77,0	1/1:7,31:39:64.62:466,65,0	0/0:39,2:43:64.67:0,65,785	0/0:41,0:43:99:0,102,954	0/0:24,1:25:38.16:0,38,521	0/0:20,0:24:20.47:0,20,212	0/0:31,1:32:57.19:0,57,661	0/0:21,2:24:7.07:0,7,367	1/1:6,21:27:41.53:299,42,0	1/1:3,10:13:23.80:171,24,0	1/1:7,17:24:50.67:372,51,0	0/0:22,2:24:19.27:0,19,506	0/0:36,0:37:83.67:0,84,760	0/0:34,0:35:65.17:0,65,738	0/0:11,0:11:30.05:0,30,292
chr10	109762518	.	GGGA	G	330.57	PASS	AB=0.911;AC=9;AF=0.167;AN=54;BaseQRankSum=4.829;DP=232;FS=1.595;HRun=0;HaplotypeScore=49.2119;InbreedingCoeff=-0.0893;MQ=65.11;MQ0=4;MQRankSum=-4.649;QD=3.89;ReadPosRankSum=5.891;VQSLOD=1.2281;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:30.19:30,0,106	0/0:2,0:2:6.01:0,6,74	0/0:34,0:11:16.57:0,17,220	0/0:29,0:10:16.17:0,16,171	0/0:1,0:1:3:0,3,25	0/1:1,2:3:18.78:37,0,19	0/1:12,2:14:40.40:40,0,143	0/0:10,0:10:1.47:0,1,131	0/0:3,0:3:5.94:0,6,41	0/0:2,0:2:5.22:0,5,34	./.	0/0:7,0:7:15:0,15,129	0/0:3,0:3:2.60:0,3,10	0/0:3,0:3:8.95:0,9,75	0/0:7,0:7:15.01:0,15,140	0/1:7,0:6:11.76:12,0,34	0/1:20,1:20:99:154,0,108	0/1:16,1:17:85.99:86,0,150	0/0:5,0:5:13.80:0,14,106	0/0:3,0:3:2.60:0,3,25	0/0:22,0:22:0.32:0,0,137	0/0:4,0:4:8.90:0,9,67	0/0:2,0:3:5.68:0,6,30	0/0:6,0:5:11.95:0,12,113	0/0:2,0:2:5.95:0,6,44	0/1:4,0:4:13.10:27,0,13	1/1:4,1:5:13.58:78,14,0	0/0:1,0:1:2.98:0,3,22
chr10	109763818	.	AT	A	2415.55	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.631;DP=603;FS=0.437;HRun=7;HaplotypeScore=67.7273;InbreedingCoeff=0.9382;MQ=66.27;MQ0=1;MQRankSum=0.257;QD=23.23;ReadPosRankSum=1.198;VQSLOD=3.7920;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,126,1584	0/0:8,0:8:18.06:0,18,226	0/0:15,0:13:0.30:0,0,220	0/0:14,0:9:17.86:0,18,175	1/1:0,18:18:54.07:539,54,0	1/1:1,30:31:75.17:765,75,0	1/1:3,12:15:30.06:306,30,0	0/0:27,0:27:72.23:0,72,906	1/1:0,15:15:33.08:337,33,0	0/0:22,0:22:63.20:0,63,791	0/0:19,0:19:57.17:0,57,703	0/0:33,0:33:69.21:0,69,848	0/0:23,0:23:51.16:0,51,638	0/0:26,0:26:60.18:0,60,742	0/0:20,0:20:54.17:0,54,679	0/0:19,1:20:20.55:0,21,573	0/0:20,0:20:54.16:0,54,668	0/0:19,0:19:54.17:0,54,678	0/0:19,0:19:42.12:0,42,516	0/0:21,0:21:60.19:0,60,755	0/0:25,0:25:66.21:0,66,830	0/0:10,0:10:24.08:0,24,302	0/0:15,0:15:42.13:0,42,528	0/0:23,0:23:66.16:0,66,799	1/1:2,23:25:63.14:643,63,0	0/0:23,0:23:69.22:0,69,868	0/0:30,0:30:71.85:0,72,892	0/0:17,0:17:51.13:0,51,625
chr10	109764318	.	GGGGCACACTTGCC	G	17356.64	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=8.506;DP=701;FS=7.363;HRun=0;HaplotypeScore=285.9014;InbreedingCoeff=0.9836;MQ=82.14;MQ0=0;MQRankSum=-16.516;QD=76.80;ReadPosRankSum=0.805;VQSLOD=3.0191;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:51.18:2072,51,0	0/0:14,0:14:42.14:0,42,2660	0/0:27,0:27:78.27:0,78,4064	0/0:26,0:26:78.22:0,78,3688	0/0:27,0:27:81.26:0,81,5200	0/0:27,0:27:81.28:0,81,5207	0/0:19,0:19:57.20:0,57,3687	1/1:0,31:31:92.73:2734,93,0	0/0:36,0:36:99:0,108,6546	0/0:21,0:21:63.22:0,63,4125	0/0:18,0:18:54.19:0,54,3597	0/0:30,0:30:87.30:0,87,5678	0/0:35,0:35:99:0,105,6895	0/0:38,0:38:99:0,111,7328	0/0:38,0:38:99:0,114,7093	0/0:39,0:39:99:0,117,7604	1/1:0,17:17:29.61:1297,30,0	1/1:0,11:11:24.08:1004,24,0	1/1:0,9:9:26.41:686,26,0	1/1:0,23:23:45.15:1805,45,0	1/1:0,18:18:27.09:1055,27,0	0/0:19,0:19:57.20:0,57,3712	0/0:14,0:14:42.14:0,42,2550	0/0:27,0:27:81.28:0,81,5130	0/0:20,0:20:54.19:0,54,3238	1/1:0,30:30:87.20:3320,87,0	1/1:0,38:38:75.26:3134,75,0	1/1:0,10:10:6.02:251,6,0
chr10	109764618	.	GA	G	7146.79	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.918;DP=767;FS=1.380;HRun=1;HaplotypeScore=92.6121;InbreedingCoeff=0.9996;MQ=76.39;MQ0=0;MQRankSum=-0.256;QD=36.28;ReadPosRankSum=3.246;VQSLOD=5.1131;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,168,2538	0/0:9,0:9:24.08:0,24,374	0/0:22,0:23:55.84:0,56,758	0/0:20,1:21:41.06:0,41,553	0/0:26,0:26:72.23:0,72,1102	0/0:28,0:28:81.28:0,81,1265	0/0:21,0:21:63.12:0,63,903	0/0:33,0:33:99:0,99,1487	0/0:29,0:29:87.25:0,87,1312	0/0:36,0:36:99:0,108,1631	0/0:15,0:15:42.14:0,42,656	1/1:0,34:34:93.31:1295,93,0	1/1:0,29:29:75.23:1046,75,0	1/1:0,31:31:81.27:1128,81,0	1/1:0,35:35:96.32:1331,96,0	0/0:44,0:44:99:0,132,2017	0/0:30,0:30:90.29:0,90,1379	0/0:21,0:21:63.17:0,63,923	0/0:24,0:24:69.23:0,69,1053	0/0:17,0:17:51.12:0,51,769	0/0:32,0:32:96.21:0,96,1382	1/1:1,21:22:45.15:623,45,0	1/1:0,19:19:48.14:638,48,0	1/1:0,27:27:78.26:1086,78,0	0/0:24,0:24:72.22:0,72,1097	0/0:36,0:36:99:0,108,1608	0/0:32,0:32:96.05:0,96,1389	0/0:13,0:13:39.13:0,39,606
chr10	109766220	.	G	GCA	1195.57	PASS	AC=28;AF=0.560;AN=50;BaseQRankSum=5.589;DP=317;FS=2.246;HRun=0;HaplotypeScore=108.8497;InbreedingCoeff=0.7820;MQ=51.71;MQ0=4;MQRankSum=-8.626;QD=9.13;ReadPosRankSum=-2.693;VQSLOD=2.6228;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:10:0.47:1,0,0	0/0:8,0:8:21.07:0,21,315	0/0:15,0:4:8.72:0,9,61	0/0:15,0:7:14.96:0,15,147	0/0:10,0:10:9.02:0,9,109	0/0:14,0:14:18.06:0,18,240	0/0:29,0:29:50.80:0,51,598	1/1:12,0:12:23.70:158,24,0	0/0:13,0:13:21.06:0,21,256	0/0:15,0:15:39.13:0,39,592	0/0:14,0:14:39.12:0,39,547	1/1:8,8:16:17.67:221,18,0	1/1:2,4:6:18.04:199,18,0	1/1:8,1:8:3.01:33,3,0	1/1:3,0:3:6.02:72,6,0	0/0:21,0:21:56.98:0,57,827	1/1:5,0:4:2.96:19,3,0	1/1:9,0:10:12.83:104,13,0	1/1:6,0:5:11.96:120,12,0	1/1:8,0:9:2.62:25,3,0	./.	1/1:10,2:12:3.01:36,3,0	./.	./.	0/0:14,0:14:9.02:0,9,103	1/1:12,0:14:27.36:236,27,0	1/1:11,0:7:11.91:137,12,0	1/1:5,0:5:5.53:23,6,0
chr10	109766223	.	C	CACGT	457.66	PASS	AB=1.000;AC=18;AF=0.375;AN=48;BaseQRankSum=7.699;DP=339;FS=2.705;HRun=0;HaplotypeScore=117.0797;InbreedingCoeff=0.4806;MQ=50.00;MQ0=6;MQRankSum=-6.763;QD=3.39;ReadPosRankSum=0.549;VQSLOD=2.0310;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:9:0.08:0,0,0	0/0:9,0:9:21.07:0,21,434	0/0:15,0:4:9.02:0,9,122	0/0:14,0:7:15:0,15,151	0/0:13,0:13:6.02:0,6,119	0/0:14,0:14:18.06:0,18,351	0/0:29,0:29:47.88:0,48,855	0/0:12,0:12:23.48:0,23,153	0/0:12,0:12:21.07:0,21,388	0/0:15,0:15:44.98:0,45,857	0/0:16,0:15:45.06:0,45,808	1/1:15,7:22:14.90:101,15,0	1/1:6,2:8:22.94:257,23,0	1/1:11,1:11:2.87:24,3,0	1/1:6,0:6:5.15:29,5,0	0/0:20,0:20:57.19:0,57,1152	./.	1/1:10,0:10:2.39:30,2,0	0/1:9,0:5:6.65:7,0,46	0/1:10,0:9:0:0,0,0	./.	1/1:14,2:16:2.80:13,3,0	./.	./.	0/0:12,0:12:9.03:0,9,178	0/1:15,0:14:38.35:38,0,39	0/1:11,0:6:3.18:105,0,3	0/1:7,0:6:4.27:4,0,35
chr10	109766225	.	C	CACGT	1316.78	PASS	AB=1.000;AC=18;AF=0.360;AN=50;BaseQRankSum=7.431;DP=351;FS=2.318;HRun=0;HaplotypeScore=119.2238;InbreedingCoeff=0.2302;MQ=49.03;MQ0=6;MQRankSum=-7.738;QD=8.50;ReadPosRankSum=-0.622;VQSLOD=2.9853;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:9:0:0,0,0	0/0:9,0:9:24.03:0,24,452	0/0:15,0:4:9.03:0,9,118	0/0:12,0:5:9.02:0,9,118	0/0:14,0:14:6.02:0,6,118	0/0:15,0:15:14.12:0,14,343	0/0:30,0:30:47.87:0,48,840	0/1:14,0:14:39.35:145,0,39	0/0:12,0:12:21.07:0,21,387	0/0:16,0:16:45.15:0,45,899	0/0:16,0:15:45.13:0,45,839	1/1:25,0:25:2.31:267,2,0	1/1:8,0:8:0.80:353,1,0	0/1:12,0:11:12.18:46,0,12	1/1:6,0:6:5.43:108,5,0	0/0:21,0:20:57.20:0,57,1168	./.	0/1:10,0:10:14.95:110,0,15	0/1:9,0:5:15.85:134,0,16	0/1:11,0:10:0:0,0,0	./.	1/1:10,6:16:3.01:53,3,0	./.	0/0:9,0:9:0:0,0,0	0/0:12,0:12:9.03:0,9,179	0/1:16,0:15:11.54:134,0,12	1/1:12,0:7:8.23:86,8,0	0/1:7,0:6:24.01:24,0,50
chr10	109766228	.	GCA	G	555.22	PASS	AB=0.915;AC=13;AF=0.271;AN=48;BaseQRankSum=2.686;DP=399;FS=3.055;HRun=0;HaplotypeScore=107.9585;InbreedingCoeff=0.3327;MQ=47.20;MQ0=6;MQRankSum=2.428;QD=4.37;ReadPosRankSum=2.962;VQSLOD=2.7715;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:0.89:0,1,2	0/1:7,2:9:10.76:11,0,247	./.	0/0:12,0:5:2.68:0,3,11	1/1:7,8:14:5.90:59,6,0	1/1:5,11:16:3.57:117,4,0	1/1:12,15:28:27.51:296,28,0	0/0:14,0:14:1.39:0,1,53	1/1:4,9:13:12.04:138,12,0	0/0:19,0:18:48.03:0,48,613	0/0:18,0:17:36.08:0,36,479	0/0:28,0:27:1.89:0,2,16	0/0:11,0:11:3.17:0,3,50	0/0:7,0:18:3.41:0,3,19	0/0:11,0:11:0.47:0,0,1	0/1:23,1:24:19.97:20,0,698	0/0:5,0:4:0:0,0,1	0/1:9,0:9:12.53:13,0,21	0/0:14,0:10:11.04:0,11,71	./.	./.	./.	0/0:9,0:9:0:0,0,0	0/0:10,0:9:0:0,0,0	1/1:3,8:12:3.01:35,3,0	0/0:19,0:17:19.84:0,20,97	0/0:12,0:7:3.27:0,3,15	0/0:8,0:7:12.54:0,13,58
chr10	109766255	.	CAG	C	706.04	PASS	AB=0.985;AC=28;AF=0.560;AN=50;BaseQRankSum=7.719;DP=491;FS=9.518;HRun=0;HaplotypeScore=125.2836;InbreedingCoeff=0.4516;MQ=35.67;MQ0=22;MQRankSum=-4.391;QD=2.26;ReadPosRankSum=-1.176;VQSLOD=1.8629;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:11:0.89:0,1,2	0/0:9,0:9:9.19:0,9,323	./.	0/0:9,0:2:2.44:0,2,16	1/1:27,0:26:2.08:9,2,0	0/1:17,0:17:1.19:26,0,1	1/1:31,0:30:23.99:99,24,0	0/1:18,0:14:23.55:100,0,24	1/1:16,0:15:12.80:65,13,0	0/0:31,0:23:66.05:0,66,932	0/0:23,0:20:51.06:0,51,718	1/1:31,2:30:11.25:73,11,0	1/1:19,2:21:13.54:104,14,0	1/1:28,0:26:1.77:14,2,0	0/0:18,0:18:0.34:0,0,1	0/0:29,0:28:51.99:0,52,1084	0/0:3,0:3:0:0,0,1	1/1:9,0:9:6.92:82,7,0	0/1:6,0:6:26.08:27,0,26	0/0:15,0:14:0:0,0,0	./.	0/1:29,2:30:0:0,0,0	./.	1/1:12,0:10:0.47:1,0,0	1/1:14,0:13:2.60:10,3,0	1/1:27,0:22:16.19:129,16,0	1/1:14,0:9:11.77:63,12,0	1/1:9,0:8:11.89:51,12,0
chr10	109766263	.	CACAG	C	800.14	PASS	AB=0.989;AC=26;AF=0.520;AN=50;BaseQRankSum=8.141;DP=514;FS=1.405;HRun=0;HaplotypeScore=138.8246;InbreedingCoeff=0.3265;MQ=35.36;MQ0=24;MQRankSum=-8.101;QD=2.31;ReadPosRankSum=-2.205;VQSLOD=2.0037;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:1.25:0,1,3	0/0:8,0:8:21.07:0,21,510	./.	0/1:12,0:2:1.91:2,0,33	0/0:26,0:25:0.47:0,0,1	0/1:16,0:16:5.12:5,0,74	0/1:33,0:32:6.56:7,0,167	1/1:22,0:18:8.96:114,9,0	1/1:16,0:15:2.07:50,2,0	0/0:34,0:26:74.59:0,75,1466	0/0:26,0:23:57.07:0,57,1149	0/1:33,2:31:1.38:52,0,1	1/1:26,1:27:16.86:127,17,0	0/1:28,0:26:11.02:11,0,17	0/1:19,0:19:0:0,0,0	0/0:29,0:28:75.23:0,75,1856	0/0:3,0:3:0.46:0,0,1	1/1:10,0:10:10.53:83,11,0	1/1:1,0:1:2.92:17,3,0	0/1:15,0:14:0.25:0,0,0	./.	0/1:29,2:30:0:0,0,0	./.	0/1:12,0:10:0:0,0,0	1/1:16,0:15:2.24:12,2,0	1/1:29,0:24:36.72:327,37,0	1/1:13,0:9:14.37:79,14,0	0/1:11,0:10:17.67:53,0,18
chr10	109766265	.	CAG	C	1331.32	PASS	AB=0.876;AC=27;AF=0.540;AN=50;BaseQRankSum=8.501;DP=513;FS=1.364;HRun=0;HaplotypeScore=127.7777;InbreedingCoeff=0.4114;MQ=35.24;MQ0=26;MQRankSum=-8.016;QD=4.11;ReadPosRankSum=-0.457;VQSLOD=3.0007;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,6:12:0.89:0,1,2	0/0:8,0:8:21.07:0,21,361	./.	0/0:15,0:3:0.19:0,0,19	1/1:15,11:25:2.69:13,3,0	0/1:12,3:15:7.45:7,0,49	0/1:29,3:31:33.45:33,0,128	1/1:20,2:18:10.24:141,10,0	1/1:12,4:15:2.86:60,3,0	0/0:34,0:26:64.51:0,65,1096	0/0:26,0:23:44.36:0,44,855	1/1:35,0:31:12.88:69,13,0	1/1:25,1:26:13.14:96,13,0	0/1:27,0:25:1.04:11,0,1	0/0:18,0:18:0.34:0,0,1	0/0:29,0:28:73.80:0,74,1346	0/1:1,2:3:0.01:0,0,1	1/1:8,2:10:7.57:128,8,0	1/1:1,0:1:2.92:17,3,0	0/0:10,5:14:0:0,0,0	./.	0/1:30,0:29:0:0,0,0	./.	0/1:11,0:9:0:0,0,0	1/1:15,2:16:8.54:50,9,0	1/1:23,6:24:67.25:622,67,0	1/1:12,1:9:14.86:135,15,0	0/1:8,3:10:4.71:92,0,5
chr10	109766267	.	GAC	G	777.05	PASS	AB=0.819;AC=21;AF=0.420;AN=50;BaseQRankSum=7.129;DP=513;FS=0.700;HRun=0;HaplotypeScore=130.2615;InbreedingCoeff=0.3817;MQ=35.12;MQ0=25;MQRankSum=-4.855;QD=2.75;ReadPosRankSum=1.372;VQSLOD=2.6712;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:0.89:0,1,2	0/0:9,0:9:24.06:0,24,365	./.	0/0:17,0:3:8.69:0,9,80	1/1:18,7:25:2.90:37,3,0	0/1:8,8:16:6.02:31,0,6	1/1:22,9:30:3.37:44,3,0	0/1:23,0:18:35.76:36,0,107	1/1:10,7:16:17.05:135,17,0	0/0:33,0:25:23.59:0,24,836	0/0:24,1:23:10.64:0,11,650	1/1:14,20:30:8.39:75,8,0	0/1:14,12:26:3.84:125,0,4	0/0:17,8:23:2.79:0,3,13	0/0:7,11:18:0.47:0,0,1	0/0:29,0:28:78.24:0,78,1228	0/0:3,0:3:2.92:0,3,17	1/1:10,0:10:4.81:73,5,0	0/0:2,0:2:3.37:0,3,17	0/0:15,0:14:0:0,0,0	./.	0/1:19,10:28:0:0,0,0	0/0:10,5:13:0:0,0,0	./.	1/1:12,6:17:0.43:36,0,0	1/1:29,0:24:26.46:242,26,0	1/1:13,0:9:4.88:39,5,0	0/1:11,0:10:1.49:48,0,1
chr10	109766270	.	A	ATG	339.47	PASS	AB=0.973;AC=9;AF=0.173;AN=52;BaseQRankSum=5.806;DP=540;FS=1.822;HRun=0;HaplotypeScore=144.5887;InbreedingCoeff=0.1196;MQ=36.40;MQ0=25;MQRankSum=-5.625;QD=2.39;ReadPosRankSum=1.024;VQSLOD=2.5867;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,1:14:0.39:0,0,1	0/0:9,0:9:24.08:0,24,388	./.	0/0:23,0:4:9:0,9,119	0/0:28,0:27:5.57:0,6,32	0/1:17,0:17:1.22:1,0,99	0/0:31,0:30:22.32:0,22,265	0/0:23,0:18:0.21:0,0,354	0/0:18,0:17:17.66:0,18,144	0/0:33,0:25:75.05:0,75,1132	0/0:25,0:23:57.16:0,57,861	0/0:36,0:32:11.42:0,11,111	0/0:26,0:26:14.92:0,15,144	0/0:28,0:26:5.38:0,5,43	0/0:19,0:19:0.47:0,0,2	0/0:30,0:29:78.27:0,78,1270	0/0:3,0:3:3.27:0,3,13	0/1:11,0:11:21.90:22,0,104	0/0:4,0:4:6.48:0,6,36	0/1:15,1:15:0.11:0,0,0	./.	1/1:29,0:28:0.89:2,1,0	0/0:14,0:12:0:0,0,0	0/0:11,0:9:0:0,0,0	0/0:17,0:16:14.42:0,14,122	0/1:27,2:24:99:359,0,175	0/1:14,0:10:10.04:10,0,88	0/1:11,0:10:46.70:47,0,61
chr10	109766274	.	A	ATG	834.21	PASS	AB=0.916;AC=13;AF=0.241;AN=54;BaseQRankSum=6.026;DP=572;FS=0.784;HRun=0;HaplotypeScore=147.9175;InbreedingCoeff=0.0956;MQ=37.72;MQ0=27;MQRankSum=-5.993;QD=4.61;ReadPosRankSum=0.279;VQSLOD=3.0640;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,3:17:0.02:0,0,1	0/0:9,0:9:24.08:0,24,389	0/0:15,0:1:2.99:0,3,24	0/0:31,0:8:18:0,18,233	0/0:29,0:28:8.71:0,9,58	0/1:17,0:17:1.23:1,0,77	0/0:30,0:29:22.64:0,23,250	0/1:19,1:15:85.61:86,0,337	0/0:21,0:20:17.21:0,17,134	0/0:35,0:28:72.02:0,72,1111	0/0:25,0:23:57.12:0,57,861	0/0:36,0:32:14.79:0,15,114	0/0:27,0:27:23.97:0,24,218	0/0:26,0:24:5.75:0,6,46	0/0:21,0:21:0.47:0,0,2	0/0:31,0:30:81.28:0,81,1315	1/1:5,0:5:1.93:35,2,0	0/1:11,1:12:61.62:139,0,62	0/1:4,0:4:15.30:88,0,15	0/1:20,1:20:0.11:0,0,0	./.	1/1:29,0:28:0.89:2,1,0	0/0:13,0:11:0:0,0,0	0/0:12,0:10:0:0,0,0	0/0:18,0:17:14.76:0,15,109	0/1:23,5:23:99:404,0,158	0/1:11,4:11:72.83:87,0,73	0/1:11,1:11:33.68:114,0,34
chr10	109766281	.	CAG	C	1495.29	PASS	AB=0.989;AC=30;AF=0.556;AN=54;BaseQRankSum=8.954;DP=599;FS=6.757;HRun=0;HaplotypeScore=147.4746;InbreedingCoeff=0.5088;MQ=40.00;MQ0=27;MQRankSum=-6.991;QD=4.17;ReadPosRankSum=-0.093;VQSLOD=2.5029;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:1.77:0,2,4	0/0:9,0:9:24.06:0,24,384	0/0:28,0:5:11.93:0,12,92	0/0:43,0:13:8.17:0,8,147	1/1:31,1:31:10.95:63,11,0	0/1:15,0:15:6.06:13,0,6	1/1:27,0:26:8.16:95,8,0	0/1:20,0:15:96.62:97,0,228	1/1:23,1:23:14.19:98,14,0	0/0:36,0:30:74.40:0,74,1139	0/0:22,0:20:32.42:0,32,760	1/1:34,1:32:3.82:50,4,0	1/1:27,1:28:5.40:64,5,0	0/1:25,0:23:10.83:12,0,11	0/0:22,0:22:5.79:0,6,16	0/0:33,0:32:87.08:0,87,1416	1/1:5,0:5:6.34:36,6,0	1/1:9,0:9:17.05:156,17,0	0/1:3,0:3:5.53:6,0,14	0/1:22,0:21:0:0,0,0	./.	0/1:27,2:28:0:0,0,0	0/0:16,0:14:1.62:0,2,14	1/1:13,0:11:0.47:1,0,0	1/1:18,0:17:14.20:89,14,0	1/1:27,0:23:64.79:617,65,0	1/1:14,0:11:19.75:133,20,0	1/1:13,0:12:18.34:138,18,0
chr10	109766288	.	A	ATG	2101.56	PASS	AB=0.949;AC=24;AF=0.444;AN=54;BaseQRankSum=5.571;DP=640;FS=3.667;HRun=0;HaplotypeScore=158.3815;InbreedingCoeff=0.0672;MQ=40.74;MQ0=28;MQRankSum=-3.930;QD=5.85;ReadPosRankSum=0.266;VQSLOD=2.8965;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:1.36:0,1,3	0/0:9,0:9:24.05:0,24,358	0/0:42,0:11:33.06:0,33,454	0/0:55,0:15:29.93:0,30,410	0/1:27,1:31:33.46:148,0,33	0/1:15,0:17:35.59:99,0,36	1/1:20,4:24:9:173,9,0	0/1:22,0:17:99:124,0,396	0/1:22,0:23:38.88:204,0,39	0/0:32,0:28:84.28:0,84,1328	0/0:20,0:18:48.16:0,48,779	0/1:37,0:33:1.34:1,0,178	0/0:27,0:27:27.50:0,27,321	0/1:25,0:24:2.74:3,0,66	0/0:23,0:23:8.62:0,9,37	0/0:35,0:34:87.28:0,87,1371	1/1:7,0:6:8.21:92,8,0	1/1:11,0:10:23.61:283,24,0	0/1:5,1:6:28.55:71,0,29	1/1:24,1:25:2.60:49,3,0	./.	1/1:28,0:27:0.89:2,1,0	0/1:17,0:15:0.10:4,0,0	1/1:14,0:12:2.35:8,2,0	0/1:18,1:18:28.34:241,0,28	0/1:25,0:24:69.61:496,0,70	0/1:13,1:11:8.63:112,0,9	0/1:11,0:10:21.39:150,0,21
chr10	109766303	.	C	CAG	2360.44	PASS	AB=0.969;AC=28;AF=0.519;AN=54;BaseQRankSum=2.670;DP=665;FS=5.591;HRun=0;HaplotypeScore=167.1815;InbreedingCoeff=0.7827;MQ=42.21;MQ0=24;MQRankSum=-5.698;QD=7.66;ReadPosRankSum=-0.609;VQSLOD=3.1548;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,15:23:7.87:105,8,0	0/0:10,0:10:21.04:0,21,239	0/0:51,0:11:33.10:0,33,410	0/0:62,0:20:40.13:0,40,424	0/0:34,0:34:21.03:0,21,250	0/0:15,0:15:7.98:0,8,112	0/0:25,0:25:20.80:0,21,239	1/1:19,4:20:18.02:247,18,0	0/0:22,0:22:17.85:0,18,203	0/0:32,0:31:78.21:0,78,927	0/0:17,0:17:39.10:0,39,468	1/1:32,0:31:2.36:33,2,0	1/1:27,0:30:2.33:72,2,0	1/1:25,0:24:4.88:17,5,0	0/0:23,0:28:8.62:0,9,37	0/0:28,0:28:60.09:0,60,709	1/1:2,10:11:15.05:250,15,0	1/1:6,9:12:19.62:305,20,0	1/1:7,5:8:14.99:195,15,0	1/1:7,17:25:3.01:50,3,0	1/1:2,10:12:6.02:100,6,0	0/1:30,0:30:0:0,0,0	0/1:14,0:14:0.07:4,0,0	./.	0/0:17,0:17:21.05:0,21,246	1/1:11,16:25:55.29:774,55,0	1/1:7,4:9:18.04:253,18,0	1/1:2,8:10:9.03:150,9,0
chr10	109766313	.	GAC	G	97.83	PASS	AB=0.823;AC=4;AF=0.071;AN=56;BaseQRankSum=5.821;DP=642;FS=8.967;HRun=0;HaplotypeScore=154.6061;InbreedingCoeff=0.0394;MQ=45.15;MQ0=19;MQRankSum=-4.437;QD=0.93;ReadPosRankSum=-0.582;VQSLOD=1.5793;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:18.88:0,19,197	0/0:7,0:7:21.07:0,21,388	0/0:51,0:15:44.80:0,45,612	0/0:57,1:24:43.68:0,44,702	0/0:26,0:26:27.08:0,27,472	0/0:12,0:12:15.49:0,15,222	0/0:26,0:26:29.69:0,30,454	0/0:19,0:18:32.83:0,33,442	0/0:19,0:19:26.77:0,27,364	0/0:34,0:33:98.93:0,99,1669	0/0:14,0:14:39.10:0,39,663	0/1:18,13:27:67.66:68,0,74	0/1:16,17:33:62.96:117,0,63	0/0:8,13:19:3.47:0,3,30	0/0:26,8:34:14.96:0,15,69	0/0:27,0:27:72.08:0,72,1105	0/0:15,0:14:24:0,24,223	0/0:15,0:12:23.86:0,24,209	0/0:13,0:8:18.02:0,18,209	0/0:25,0:25:12.02:0,12,138	0/0:15,0:15:15:0,15,134	0/0:12,17:29:2.99:0,3,23	0/0:5,10:14:1.62:0,2,14	0/1:12,1:12:0:0,0,0	0/0:14,0:14:30.42:0,30,493	0/1:28,0:26:5.06:5,0,449	0/0:8,0:9:1.45:0,1,161	0/0:9,0:9:20.91:0,21,184
chr10	109766321	.	C	CAGAGACAGACAG	963.32	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=5.051;DP=627;FS=1.469;HRun=0;HaplotypeScore=223.4331;InbreedingCoeff=0.8777;MQ=46.37;MQ0=17;MQRankSum=-3.160;QD=5.57;ReadPosRankSum=-6.780;VQSLOD=0.0693;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:18.06:0,18,432	0/0:7,0:7:18.06:0,18,618	0/0:35,0:12:17.40:0,17,303	0/0:48,0:24:31.09:0,31,685	0/0:26,0:26:33.57:0,34,883	0/0:13,0:13:13.87:0,14,446	0/0:26,0:26:31.65:0,32,866	0/0:23,0:23:51.63:0,52,1034	0/0:22,0:22:27.02:0,27,559	0/0:36,0:35:93.29:0,93,2326	0/0:13,0:13:24.08:0,24,782	1/1:28,3:27:22.10:305,22,0	1/1:32,2:34:30.64:367,31,0	1/1:22,1:22:8.04:80,8,0	1/1:29,5:34:25.04:269,25,0	0/0:25,0:25:60.19:0,60,1666	0/0:18,0:17:30.07:0,30,647	0/0:15,0:12:21.47:0,21,391	0/0:15,0:8:21.07:0,21,433	0/0:23,0:23:14.77:0,15,278	0/0:18,0:18:18.06:0,18,416	1/1:25,0:26:6.01:101,6,0	1/1:11,1:12:2.04:6,2,0	1/1:11,1:12:2.04:6,2,0	0/0:17,0:17:33.58:0,34,991	0/0:26,0:25:54.65:0,55,1198	0/0:10,0:10:21.05:0,21,361	0/0:9,0:9:18.06:0,18,349
chr10	109766331	.	G	GAC	91.40	PASS	AB=0.760;AC=4;AF=0.071;AN=56;BaseQRankSum=4.912;DP=608;FS=7.500;HRun=0;HaplotypeScore=156.3900;InbreedingCoeff=0.1489;MQ=51.36;MQ0=13;MQRankSum=-4.670;QD=1.32;ReadPosRankSum=-4.139;VQSLOD=0.4704;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:24.95:0,25,345	0/0:6,0:6:18.06:0,18,275	0/0:26,0:15:29.10:0,29,421	0/0:36,0:22:55.49:0,55,742	0/0:29,0:29:47.87:0,48,648	0/0:16,0:16:23.01:0,23,344	0/0:27,0:27:35.88:0,36,550	0/0:26,0:26:69.23:0,69,1034	0/0:22,0:22:36.05:0,36,501	0/0:37,0:36:96.28:0,96,1467	0/0:11,0:11:30.07:0,30,417	0/1:21,9:27:99:109,0,171	0/1:20,10:30:70.02:70,0,324	0/0:11,12:22:3.28:0,3,168	0/0:31,5:36:29.16:0,29,256	0/0:28,0:28:69.22:0,69,1033	0/0:19,0:18:39.12:0,39,574	0/0:15,0:12:19.19:0,19,217	0/0:14,0:9:21.07:0,21,321	0/0:20,0:20:17.94:0,18,254	0/0:20,0:20:27.08:0,27,392	0/0:14,10:24:11.93:0,12,160	1/1:4,5:9:0.04:4,0,0	0/0:12,1:13:2.99:0,3,24	0/0:19,0:19:45.10:0,45,623	0/0:24,0:23:69.23:0,69,1041	0/0:8,0:8:23.97:0,24,333	0/0:10,0:10:27.06:0,27,368
chr10	109767278	.	T	TGGGG	2506.72	PASS	AB=0.980;AC=29;AF=0.537;AN=54;BaseQRankSum=-2.527;DP=353;FS=3.444;HRun=11;HaplotypeScore=94.4232;InbreedingCoeff=0.2666;MQ=74.69;MQ0=6;MQRankSum=-0.325;QD=10.27;ReadPosRankSum=0.914;VQSLOD=-0.0492;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:10.84:48,0,11	0/0:7,0:7:11.97:0,12,163	0/0:16,0:11:11.92:0,12,139	0/0:18,0:17:11.35:0,11,138	0/1:8,0:8:6.87:20,0,7	0/1:12,0:12:26.33:29,0,26	0/1:16,0:15:6.90:7,0,65	0/0:10,0:10:2.35:0,2,39	0/0:11,0:9:5.87:0,6,44	0/0:13,0:14:14.83:0,15,183	0/0:9,0:9:8.81:0,9,122	1/1:19,2:21:29.12:529,29,0	1/1:10,1:10:16.29:277,16,0	1/1:10,1:11:24.08:454,24,0	1/1:7,0:7:9.03:170,9,0	0/0:22,0:22:32.71:0,33,442	1/1:13,0:13:5.40:16,5,0	0/1:5,0:7:27.62:46,0,28	0/1:9,0:9:10.31:19,0,10	1/1:10,0:11:1.49:19,1,0	1/1:11,0:11:2.90:16,3,0	1/1:12,1:13:21.07:398,21,0	1/1:10,1:11:12.03:236,12,0	1/1:15,2:17:20.26:359,20,0	0/1:14,0:14:0:0,0,0	0/1:15,0:15:16.47:19,0,16	0/1:17,0:18:18.46:18,0,31	./.
chr10	109767285	.	G	GGGGA	2923.20	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-6.263;DP=334;FS=2.228;HRun=0;HaplotypeScore=99.7216;InbreedingCoeff=0.8058;MQ=67.45;MQ0=6;MQRankSum=1.951;QD=29.23;ReadPosRankSum=6.300;VQSLOD=3.5743;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:14:14.31:0,14,99	0/0:8,0:8:23.88:0,24,298	0/0:16,0:9:15.04:0,15,210	0/0:19,0:15:17.59:0,18,212	0/0:4,0:5:7.04:0,7,40	0/0:16,0:16:22.94:0,23,156	0/0:19,0:20:25.92:0,26,205	0/0:11,0:12:6.78:0,7,62	0/0:10,0:10:14.14:0,14,105	0/0:8,0:8:18.01:0,18,264	0/0:5,0:5:14.83:0,15,188	1/1:6,12:19:30.98:717,31,0	1/1:3,8:12:20.74:396,21,0	1/1:1,14:15:24.08:583,24,0	1/1:0,16:16:9.03:220,9,0	0/0:21,0:21:56.98:0,57,754	0/0:15,0:15:20.60:0,21,117	0/0:8,0:8:14.48:0,14,92	0/0:6,0:6:7.74:0,8,43	0/0:8,0:8:5.21:0,5,23	0/0:7,0:7:0.02:0,0,1	1/1:1,9:11:21.07:498,21,0	1/1:3,8:11:12.03:284,12,0	1/1:5,10:15:18.50:408,19,0	0/0:8,0:8:3.47:0,3,26	0/0:6,0:7:9.73:0,10,56	0/0:15,0:15:11.43:0,11,83	0/0:3,0:2:0.89:0,1,2
chr10	109767286	.	GGGGTT	G	2964.52	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-1.863;DP=323;FS=4.301;HRun=0;HaplotypeScore=74.3845;InbreedingCoeff=0.8051;MQ=63.43;MQ0=6;MQRankSum=-8.131;QD=19.63;ReadPosRankSum=-6.869;VQSLOD=1.2262;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:10,2:12:18.02:225,18,0	0/0:8,0:8:24.08:0,24,581	0/0:15,0:8:15.02:0,15,329	0/0:18,0:13:14.38:0,14,290	1/1:5,0:5:2.79:31,3,0	1/1:11,5:16:39.36:537,39,0	1/1:13,6:18:36.12:523,36,0	0/1:12,0:12:9.37:314,0,9	1/1:10,1:9:14.10:196,14,0	0/0:7,0:7:15:0,15,423	0/0:5,0:5:14.79:0,15,326	0/0:19,0:19:26.36:0,26,584	0/0:13,0:12:17.35:0,17,353	0/0:14,0:14:24.08:0,24,520	0/0:15,0:15:9.03:0,9,195	0/0:21,0:21:57.18:0,57,1546	1/1:11,3:14:23.92:266,24,0	1/1:5,3:8:24.02:293,24,0	1/1:6,0:6:12:129,12,0	1/1:8,0:8:14.67:159,15,0	1/1:6,1:7:6.02:80,6,0	0/0:12,0:12:23.79:0,24,510	0/0:10,0:10:11.88:0,12,251	0/0:15,0:15:21.07:0,21,415	1/1:6,2:8:3.01:39,3,0	1/1:7,0:7:9.02:102,9,0	1/1:12,3:15:17.82:242,18,0	1/1:3,0:2:3.01:41,3,0
chr10	109767323	.	T	TA	5667.42	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-2.596;DP=338;FS=9.793;HRun=0;HaplotypeScore=56.7413;InbreedingCoeff=0.8639;MQ=48.34;MQ0=6;MQRankSum=-11.033;QD=29.67;ReadPosRankSum=-0.592;VQSLOD=3.7888;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:11:21.07:322,21,0	0/0:6,0:6:18.06:0,18,252	0/1:19,0:8:22.94:23,0,220	0/0:16,0:7:18.06:0,18,252	1/1:1,13:13:24.08:381,24,0	1/1:1,10:11:30.10:478,30,0	1/1:0,24:24:57.19:907,57,0	1/1:4,16:20:39.13:623,39,0	1/1:1,4:4:3.01:37,3,0	0/0:11,0:11:33.11:0,33,461	0/0:7,0:7:21.07:0,21,294	0/0:14,0:14:30.09:0,30,402	0/0:7,0:7:9.03:0,9,126	0/0:15,0:15:30.10:0,30,419	0/0:16,0:16:21.06:0,21,294	0/0:15,0:15:45.14:0,45,609	1/1:0,12:11:15.01:211,15,0	1/1:0,7:7:18.06:274,18,0	1/1:2,6:7:21.07:326,21,0	1/1:1,8:9:21.07:335,21,0	1/1:0,13:13:24.08:383,24,0	0/0:17,0:17:45.15:0,45,629	0/0:10,0:10:21.07:0,21,292	0/0:13,0:13:27.09:0,27,377	1/1:1,5:6:9.03:133,9,0	1/1:1,16:17:48.16:758,48,0	1/1:0,11:11:24.08:382,24,0	1/1:0,4:4:6.02:96,6,0
chr10	109767367	.	GA	G	1543.26	PASS	AB=0.862;AC=28;AF=0.500;AN=56;BaseQRankSum=1.413;DP=488;FS=3.332;HRun=15;HaplotypeScore=84.3353;InbreedingCoeff=0.5454;MQ=55.52;MQ0=7;MQRankSum=1.145;QD=5.55;ReadPosRankSum=2.810;VQSLOD=2.9902;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:22,2:25:2.26:2,0,238	0/0:3,0:3:2.85:0,3,26	0/0:16,0:5:10.51:0,11,60	0/1:8,1:5:9.75:10,0,23	1/1:15,9:23:31.53:210,32,0	0/1:8,10:20:8.74:84,0,9	1/1:7,5:12:17.70:115,18,0	0/0:31,2:33:11.55:0,12,296	1/1:1,5:7:9.99:50,10,0	0/0:27,0:28:34.31:0,34,316	0/1:14,1:15:1.34:1,0,97	1/1:9,6:15:24.78:153,25,0	1/1:6,3:9:20.52:113,21,0	1/1:13,4:17:15.30:148,15,0	1/1:7,7:15:8.20:169,8,0	0/0:18,1:18:35.79:0,36,291	0/0:18,0:18:33.32:0,33,266	0/1:16,2:17:31.73:32,0,193	0/0:15,1:17:3.20:0,3,149	0/1:16,1:17:4.83:5,0,148	0/0:16,0:17:12.76:0,13,82	1/1:13,4:18:31.44:196,31,0	1/1:13,2:15:2.07:125,2,0	1/1:13,4:19:15.81:164,16,0	1/1:9,4:16:30.48:162,30,0	0/0:22,0:22:19.18:0,19,266	0/0:25,0:24:29.38:0,29,347	0/0:12,0:12:12.47:0,12,107
chr10	109767766	.	C	CA	2560.89	PASS	AB=0.781;AC=14;AF=0.250;AN=56;BaseQRankSum=3.696;DP=731;FS=4.848;HRun=11;HaplotypeScore=99.2881;InbreedingCoeff=0.7206;MQ=62.59;MQ0=2;MQRankSum=3.348;QD=11.09;ReadPosRankSum=0.870;VQSLOD=3.3065;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,4:59:58.57:0,59,821	0/0:11,0:11:17.90:0,18,139	0/0:18,0:11:1.84:0,2,34	0/0:20,0:15:0.98:0,1,71	0/0:5,0:30:31.24:0,31,95	0/0:2,0:23:35.94:0,36,110	0/0:4,0:19:34.48:0,34,129	0/0:27,1:27:20.30:0,20,339	0/0:6,0:17:14.25:0,14,41	0/0:23,0:22:44.76:0,45,346	0/0:15,0:15:26.85:0,27,208	1/1:13,28:41:50.94:501,51,0	0/1:9,17:26:22.08:157,0,22	1/1:7,19:26:13.14:289,13,0	1/1:8,26:35:59.79:576,60,0	0/0:31,0:32:49.34:0,49,556	0/0:32,0:33:64.73:0,65,493	0/0:22,0:23:46.80:0,47,354	0/0:24,0:24:36.79:0,37,298	0/0:20,1:22:19.35:0,19,321	0/0:17,0:17:32.81:0,33,255	1/1:6,19:25:45.05:446,45,0	1/1:2,11:15:36.38:348,36,0	1/1:5,13:18:42.04:415,42,0	0/0:3,0:34:53.94:0,54,175	0/0:35,1:37:22.28:0,22,346	0/1:43,2:45:16.53:17,0,557	0/0:14,0:14:8.41:0,8,248
chr10	109768493	.	A	ACTCTCTCTCT	6222.96	PASS	AB=0.892;AC=22;AF=0.393;AN=56;BaseQRankSum=-5.275;DP=469;FS=6.534;HRun=0;HaplotypeScore=152.1149;InbreedingCoeff=0.5040;MQ=71.28;MQ0=8;MQRankSum=-6.494;QD=25.40;ReadPosRankSum=-4.341;VQSLOD=2.7838;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:19,2:21:9.03:307,9,0	0/0:2,0:2:5.98:0,6,112	0/0:48,0:28:14.45:0,14,223	0/1:35,0:17:15.89:16,0,88	0/0:15,0:17:0.93:0,1,351	0/1:20,0:23:2.16:2,0,318	0/1:12,0:16:54.90:55,0,187	1/1:36,0:35:55.48:880,55,0	0/1:8,0:10:9.98:10,0,88	0/0:16,0:16:30.03:0,30,789	0/0:8,0:8:21.06:0,21,540	0/0:27,0:27:35.29:0,35,1090	0/0:17,0:16:39.11:0,39,998	0/0:18,0:18:36.11:0,36,983	0/0:13,0:13:26.45:0,26,677	0/0:17,0:17:39.13:0,39,1124	1/1:13,4:17:26.93:758,27,0	1/1:6,0:5:6.02:144,6,0	1/1:14,0:15:21.06:555,21,0	1/1:6,0:6:8.96:144,9,0	0/1:11,0:9:4.03:188,0,4	0/0:7,0:7:6.02:0,6,147	0/0:13,0:14:29.68:0,30,706	0/0:10,0:10:15.03:0,15,327	0/0:8,0:9:21.03:0,21,297	0/1:16,4:19:40.78:1161,0,41	1/1:13,7:21:36.12:1624,36,0	1/1:7,1:8:12.02:377,12,0
chr10	109768526	.	TTA	T	4278.37	PASS	AB=0.978;AC=38;AF=0.679;AN=56;BaseQRankSum=3.025;DP=381;FS=8.061;HRun=0;HaplotypeScore=77.5343;InbreedingCoeff=0.4265;MQ=54.05;MQ0=11;MQRankSum=0.746;QD=14.12;ReadPosRankSum=1.173;VQSLOD=4.0278;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:3.35:3,0,20	0/0:4,0:3:8.99:0,9,110	0/1:27,0:8:13.33:13,0,16	0/1:25,0:4:15.55:16,0,42	1/1:9,4:13:38.95:426,39,0	1/1:12,7:20:50.89:545,51,0	1/1:7,2:10:27.03:324,27,0	1/1:28,0:23:32.46:194,32,0	1/1:7,2:9:20.90:189,21,0	0/0:19,0:19:57.12:0,57,910	0/0:10,0:9:26.90:0,27,363	1/1:0,27:27:54.07:701,54,0	1/1:1,13:13:36.08:480,36,0	1/1:1,12:13:24.97:335,25,0	1/1:0,12:10:18.06:250,18,0	0/0:14,0:14:39:0,39,624	0/1:11,1:12:12.64:51,0,13	1/1:12,0:11:7.97:15,8,0	0/1:17,1:17:33.22:74,0,33	1/1:3,0:3:4.67:20,5,0	1/1:3,0:2:0.89:2,1,0	1/1:1,2:3:6.02:83,6,0	1/1:0,9:9:20.92:248,21,0	1/1:0,3:3:3.01:41,3,0	1/1:8,2:9:23.77:234,24,0	0/1:14,0:14:33.86:34,0,63	0/0:26,0:26:9.85:0,10,111	0/0:5,0:5:3.75:0,4,22
chr10	109768527	.	TA	T	4567.90	PASS	AB=0.583;AC=45;AF=0.804;AN=56;BaseQRankSum=5.737;DP=378;FS=10.391;HRun=5;HaplotypeScore=70.6892;InbreedingCoeff=0.7398;MQ=54.07;MQ0=11;MQRankSum=-0.727;QD=14.98;ReadPosRankSum=0.062;VQSLOD=3.3381;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:23.26:367,23,0	0/0:4,0:3:8.92:0,9,76	1/1:27,0:8:3.81:24,4,0	0/0:23,0:4:5.74:0,6,40	1/1:13,0:13:24.75:139,25,0	1/1:18,0:19:39.86:218,40,0	1/1:9,0:9:19.92:109,20,0	1/1:11,16:23:63.05:634,63,0	1/1:9,0:9:15.52:94,16,0	0/0:20,0:20:54.08:0,54,630	0/0:10,0:9:18.56:0,19,230	1/1:27,0:27:52.63:307,53,0	1/1:14,0:13:35.01:202,35,0	1/1:12,1:13:26.40:170,26,0	1/1:12,0:10:17.55:102,18,0	0/0:14,0:14:38.96:0,39,440	1/1:3,9:12:26.94:256,27,0	1/1:0,12:11:27.08:303,27,0	1/1:4,14:17:42:417,42,0	1/1:0,3:3:8.92:84,9,0	1/1:0,3:2:3.01:34,3,0	1/1:3,0:3:5.85:34,6,0	1/1:9,0:9:17.59:109,18,0	1/1:3,0:3:2.90:16,3,0	1/1:10,0:9:18.51:91,19,0	0/1:4,10:14:2.53:291,0,3	1/1:5,20:25:45.07:452,45,0	1/1:1,4:5:11.98:113,12,0
chr10	109769074	.	AC	A	1063.49	PASS	AB=0.500;AC=43;AF=0.827;AN=52;BaseQRankSum=3.928;DP=238;FS=0.000;HRun=1;HaplotypeScore=259.2495;InbreedingCoeff=0.3080;MQ=28.88;MQ0=0;MQRankSum=-1.105;QD=4.62;ReadPosRankSum=2.396;VQSLOD=0.1429;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:18.51:85,19,0	1/1:1,6:7:6.26:47,6,0	./.	./.	1/1:1,14:15:6.06:29,6,0	1/1:0,5:5:0.44:20,0,0	1/1:0,14:14:12.60:43,13,0	0/0:0,7:7:1.02:0,1,8	1/1:0,7:7:10.99:48,11,0	0/1:0,8:8:6.75:12,0,7	0/1:0,6:6:0.09:0,0,7	1/1:0,17:17:38.84:148,39,0	1/1:0,12:12:27.40:104,27,0	1/1:0,16:16:32.68:119,33,0	1/1:0,16:16:31.33:112,31,0	1/1:1,9:10:13.30:48,13,0	0/1:0,1:1:0:0,0,0	1/1:0,5:5:11.18:48,11,0	0/0:0,1:1:2.60:0,3,10	1/1:0,7:7:10.08:37,10,0	1/1:0,5:5:6.66:19,7,0	0/1:0,11:11:2.64:3,0,18	1/1:0,9:9:14.03:51,14,0	1/1:0,8:8:10.10:35,10,0	1/1:1,12:13:16.90:80,17,0	0/1:0,13:13:6.91:42,0,7	1/1:0,7:7:6.17:40,6,0	1/1:0,1:1:2.37:8,2,0
chr10	109769920	.	TTC	T	908.29	PASS	AB=0.923;AC=25;AF=0.595;AN=42;BaseQRankSum=0.475;DP=530;FS=13.773;HRun=0;HaplotypeScore=105.6645;InbreedingCoeff=0.6190;MQ=66.27;MQ0=7;MQRankSum=0.482;QD=3.90;ReadPosRankSum=1.025;VQSLOD=1.2485;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:27,0:15:0:0,0,0	0/0:40,0:40:5.81:0,6,42	0/0:29,0:32:32.37:0,32,241	0/0:23,0:25:13.75:0,14,104	1/1:19,0:26:0.94:1,1,0	0/0:18,0:20:11.29:0,11,65	0/1:22,2:23:23.50:23,0,408	0/0:15,0:15:15.04:0,15,192	1/1:9,13:22:5.88:65,6,0	1/1:14,0:14:15.04:164,15,0	./.	1/1:8,13:23:11.49:80,11,0	0/0:23,0:22:3.41:0,3,350	1/1:8,0:9:2.84:14,3,0	1/1:17,0:17:5.84:40,6,0	1/1:17,0:19:5.68:28,6,0	./.	./.	1/1:10,0:12:17.68:157,18,0	1/1:9,0:9:9.02:98,9,0	1/1:22,0:21:26.88:294,27,0	0/0:24,0:23:5.95:0,6,58	1/1:11,0:15:11.36:56,11,0	1/1:18,0:20:8.52:42,9,0	./.
chr10	109769970	.	CTGTGTGTGTGTGTGTG	C	4200.39	PASS	AB=0.853;AC=24;AF=0.462;AN=52;BaseQRankSum=9.034;DP=544;FS=58.996;HRun=0;HaplotypeScore=185.5538;InbreedingCoeff=0.6713;MQ=42.02;MQ0=63;MQRankSum=-8.986;QD=20.79;ReadPosRankSum=-1.832;VQSLOD=0.4986;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:10:6.02:156,6,0	./.	0/0:28,0:4:12.04:0,12,430	0/0:31,0:4:3.01:0,3,143	1/1:8,5:12:8.93:163,9,0	1/1:19,12:25:26.75:818,27,0	1/1:16,1:22:8.96:230,9,0	./.	1/1:16,9:21:14.65:497,15,0	0/0:30,0:30:72.25:0,72,4227	0/0:20,0:19:30.10:0,30,1767	0/0:29,0:28:30.57:0,31,2180	0/0:17,0:17:33.11:0,33,2091	0/0:20,0:19:17.83:0,18,1175	0/0:35,0:33:42.14:0,42,2437	0/0:28,0:28:54.11:0,54,3297	0/1:11,0:10:99:167,0,201	1/1:5,0:11:12.04:447,12,0	1/1:5,0:8:6.02:224,6,0	1/1:2,0:2:3.01:112,3,0	0/0:13,0:7:1.66:0,2,182	0/0:18,0:19:24.04:0,24,1326	0/0:12,0:12:21.41:0,21,926	0/0:28,0:26:39.04:0,39,2477	1/1:11,8:16:20.94:495,21,0	0/1:13,0:11:99:133,0,415	1/1:6,0:13:20.65:648,21,0	1/1:12,0:6:3.01:112,3,0
chr10	109771132	.	ATATATGTATATGTATATGTATATGTATATG	A	2810.44	PASS	AB=1.000;AC=32;AF=0.696;AN=46;BaseQRankSum=4.717;DP=465;FS=8.121;HRun=0;HaplotypeScore=306.0208;InbreedingCoeff=0.4265;MQ=55.95;MQ0=2;MQRankSum=-2.449;QD=7.70;ReadPosRankSum=3.168;VQSLOD=1.0530;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:1.81:5,2,0	0/0:10,0:10:21.06:0,21,2389	./.	./.	1/1:5,28:33:23.95:1073,24,0	0/1:17,0:17:0.01:1,0,0	1/1:9,0:9:1.10:40,1,0	1/1:48,0:47:3:27,3,0	./.	0/0:19,0:18:33.11:0,33,3871	0/0:12,0:12:23.67:0,24,1992	1/1:8,10:18:3.01:229,3,0	1/1:14,17:31:6.02:457,6,0	1/1:5,10:15:6.02:457,6,0	1/1:20,0:20:35.98:432,36,0	0/0:21,0:21:30.10:0,30,3088	1/1:16,0:16:3.01:37,3,0	0/1:14,0:14:0:0,0,0	0/1:15,0:15:0.04:0,0,0	./.	0/1:9,0:9:0:0,0,0	./.	1/1:7,0:7:3.01:50,3,0	1/1:10,0:10:3:25,3,0	1/1:16,0:16:3:61,3,0	0/1:16,0:15:21.46:21,0,520	1/1:15,0:15:3:27,3,0	0/1:23,0:22:0:1,0,0
chr10	109771166	.	ATG	A	1590.42	PASS	AB=1.000;AC=28;AF=0.538;AN=52;BaseQRankSum=7.467;DP=353;FS=1.734;HRun=0;HaplotypeScore=67.6686;InbreedingCoeff=0.5829;MQ=47.48;MQ0=8;MQRankSum=-5.401;QD=8.03;ReadPosRankSum=-3.503;VQSLOD=2.7389;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:14.86:106,15,0	0/0:10,0:10:30.07:0,30,500	0/0:2,0:1:3.01:0,3,56	./.	0/0:33,0:33:2.70:0,3,244	1/1:18,0:17:28.07:185,28,0	1/1:4,0:4:8.72:54,9,0	1/1:6,14:16:41.79:319,42,0	1/1:8,0:8:14.75:94,15,0	0/0:18,0:16:48.16:0,48,883	0/0:18,0:18:54.17:0,54,968	0/1:12,0:12:3.91:4,0,65	0/1:20,0:20:10.88:11,0,58	0/1:13,0:13:10.89:11,0,84	0/0:19,0:19:28.97:0,29,231	0/0:21,0:21:57.16:0,57,986	1/1:15,0:15:10.66:73,11,0	1/1:12,0:12:20.63:135,21,0	1/1:0,5:5:11.87:80,12,0	./.	1/1:8,0:7:2.91:17,3,0	0/0:2,0:2:2.94:0,3,18	0/0:10,0:10:27.34:0,27,256	0/0:7,0:7:8.97:0,9,72	1/1:15,0:15:29.61:207,30,0	0/1:17,0:16:67.36:230,0,67	1/1:8,0:8:17.75:118,18,0	1/1:9,0:8:18.84:138,19,0
chr10	109774647	.	CTAT	C	23115.38	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=11.381;DP=732;FS=0.729;HRun=0;HaplotypeScore=113.0603;InbreedingCoeff=0.9930;MQ=71.85;MQ0=0;MQRankSum=-4.736;QD=40.13;ReadPosRankSum=4.396;VQSLOD=5.9203;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,40:41:99:1732,105,0	0/0:9,0:9:27.09:0,27,594	0/0:18,0:18:39.13:0,39,830	0/0:18,0:18:48.15:0,48,1027	1/1:0,20:20:48.16:768,48,0	1/1:0,24:24:66.22:1083,66,0	1/1:0,14:14:42.14:699,42,0	1/1:1,14:15:42.13:676,42,0	1/1:0,31:30:78.27:1283,78,0	0/0:35,0:35:99:0,105,2355	0/0:21,0:21:57.09:0,57,1110	1/1:1,42:43:99:1766,108,0	1/1:0,29:28:75.26:1232,75,0	1/1:4,45:49:99:1849,114,0	1/1:4,54:58:99:2328,141,0	0/0:53,2:55:47.55:0,48,2862	1/1:0,20:20:51.17:849,51,0	1/1:3,15:18:33.11:549,33,0	1/1:1,10:9:24.08:388,24,0	1/1:2,11:13:36.12:597,36,0	1/1:1,49:49:99:1916,117,0	1/1:0,20:20:51.17:832,51,0	1/1:4,20:24:54.18:815,54,0	1/1:3,24:27:63.22:1048,63,0	1/1:0,16:16:45.15:747,45,0	1/1:2,25:27:75.22:1170,75,0	1/1:1,19:20:39.08:588,39,0	1/1:2,4:6:12.04:200,12,0
chr10	109780395	.	AG	A	2132.22	PASS	AB=0.920;AC=27;AF=0.482;AN=56;BaseQRankSum=2.790;DP=476;FS=27.592;HRun=12;HaplotypeScore=75.9856;InbreedingCoeff=0.0365;MQ=69.34;MQ0=0;MQRankSum=1.597;QD=6.13;ReadPosRankSum=4.493;VQSLOD=0.2930;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:22,2:24:25.44:25,0,126	0/1:5,0:5:10.07:10,0,41	0/1:8,2:8:14.59:57,0,15	0/1:14,0:14:21.42:21,0,44	0/1:9,1:11:9.45:9,0,33	0/0:25,0:27:17.51:0,18,123	0/0:18,0:19:24.43:0,24,113	0/0:22,0:22:2.92:0,3,17	0/0:15,0:17:26.56:0,27,111	0/0:16,0:16:6.12:0,6,78	0/1:8,0:8:16.32:16,0,38	1/1:7,22:29:65.74:509,66,0	1/1:9,5:16:13.92:84,14,0	1/1:1,14:16:37.83:284,38,0	1/1:3,19:23:53.79:417,54,0	0/1:16,1:17:31.43:31,0,76	0/1:36,3:39:41.85:42,0,320	0/1:13,1:14:28.40:28,0,104	0/1:22,0:22:6.68:7,0,89	0/1:8,1:10:21.07:21,0,22	0/1:25,5:31:14.23:81,0,14	1/1:8,7:15:22.55:148,23,0	1/1:2,9:11:26.88:207,27,0	1/1:5,12:19:42.86:307,43,0	0/0:8,0:8:8.13:0,8,38	0/0:17,0:17:6.90:0,7,63	0/1:11,1:11:8.24:8,0,93	0/0:2,0:2:6:0,6,54
chr10	109780406	.	G	GT	1139.02	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=0.041;DP=391;FS=5.531;HRun=0;HaplotypeScore=86.0037;InbreedingCoeff=0.6804;MQ=74.04;MQ0=0;MQRankSum=-2.364;QD=12.38;ReadPosRankSum=-1.407;VQSLOD=3.8175;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:47.68:0,48,427	0/1:7,0:7:1.86:2,0,98	0/0:16,0:13:15.58:0,16,147	0/0:15,0:14:23.54:0,24,205	1/1:9,2:11:12.02:141,12,0	1/1:16,5:21:15.91:289,16,0	1/1:8,8:16:23.77:300,24,0	0/0:23,0:23:58.21:0,58,444	1/1:5,7:12:35.96:402,36,0	0/0:4,0:5:10.44:0,10,89	0/1:6,0:7:3.46:3,0,85	0/0:30,0:30:59.44:0,59,386	0/0:8,0:8:16.86:0,17,82	0/0:18,0:18:45.64:0,46,233	0/0:23,0:23:51.84:0,52,262	0/0:9,0:9:20.84:0,21,210	0/0:25,0:25:65.67:0,66,666	0/0:13,0:13:26.67:0,27,254	0/0:10,0:10:23.87:0,24,214	0/0:4,0:4:8.79:0,9,71	0/0:24,0:24:49.69:0,50,371	0/0:11,0:11:0.02:0,0,79	0/1:10,0:10:15.96:16,0,83	0/0:23,0:23:46.28:0,46,308	1/1:5,3:8:17.84:158,18,0	0/0:10,0:10:18.91:0,19,192	0/0:9,0:9:23.89:0,24,221	0/0:6,0:6:15:0,15,141
chr10	109780461	.	AAAGGGCAGACTGCCTCC	A	7315.01	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.401;DP=437;FS=5.412;HRun=0;HaplotypeScore=208.1108;InbreedingCoeff=0.9903;MQ=76.81;MQ0=0;MQRankSum=-10.738;QD=140.67;ReadPosRankSum=0.694;VQSLOD=4.1596;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.22:0,63,5042	0/0:15,0:15:45.15:0,45,3783	0/0:15,0:15:45.15:0,45,2308	0/0:16,0:15:45.15:0,45,2523	1/1:0,9:9:24.08:1228,24,0	1/1:1,16:17:48.15:2330,48,0	1/1:0,11:11:33.11:1690,33,0	0/0:19,0:19:54.19:0,54,3936	1/1:0,5:5:15.05:768,15,0	0/0:12,0:12:36.12:0,36,3052	0/0:5,0:5:15.05:0,15,1059	0/0:28,0:28:84.25:0,84,6664	0/0:19,0:19:48.15:0,48,3830	0/0:17,0:17:47.82:0,48,4091	0/0:15,0:15:37.01:0,37,2520	0/0:14,0:14:39.13:0,39,3326	0/0:24,0:24:69.24:0,69,5712	0/0:17,0:17:43.03:0,43,3408	0/0:22,0:22:66.23:0,66,5075	0/0:9,0:9:27.09:0,27,2290	0/0:28,0:28:83.10:0,83,6585	0/0:8,0:8:24.07:0,24,1796	0/0:8,0:8:24.08:0,24,1709	0/0:23,0:23:63.22:0,63,5246	1/1:0,10:10:27.09:1298,27,0	0/0:19,0:19:57.20:0,57,4762	0/0:17,0:17:46.02:0,46,3461	0/0:11,0:11:27.09:0,27,2302
chr10	109780521	.	CT	C	1219.77	PASS	AB=0.721;AC=26;AF=0.464;AN=56;BaseQRankSum=-1.509;DP=573;FS=2.978;HRun=18;HaplotypeScore=107.0620;InbreedingCoeff=0.3315;MQ=65.52;MQ0=20;MQRankSum=2.649;QD=3.23;ReadPosRankSum=3.105;VQSLOD=0.0276;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,15:27:2.02:63,0,2	0/0:10,0:10:11.95:0,12,91	0/0:28,1:11:5.70:0,6,31	0/0:25,0:14:6.19:0,6,53	0/0:20,0:21:9.63:0,10,65	0/0:14,0:16:25.05:0,25,159	0/0:13,0:16:26.35:0,26,136	0/1:15,9:25:58.91:82,0,59	0/0:7,1:14:20.82:0,21,102	0/1:18,4:22:11.07:11,0,167	0/0:11,0:9:2.41:0,2,96	1/1:15,4:20:17.13:106,17,0	1/1:16,1:19:9.23:41,9,0	1/1:17,2:16:20.91:103,21,0	0/1:11,6:15:7.96:26,0,8	0/0:17,1:18:10.97:0,11,147	1/1:17,5:35:22.45:148,22,0	1/1:14,14:29:35.01:173,35,0	0/1:30,9:38:4.60:132,0,5	1/1:7,0:10:11.66:47,12,0	1/1:14,4:20:28.60:138,29,0	0/1:9,5:17:16:63,0,16	0/0:6,5:11:2.96:0,3,19	0/1:13,7:23:27.39:108,0,27	0/0:11,0:17:8.06:0,8,114	0/1:16,7:25:37.36:82,0,37	1/1:4,5:10:3.69:55,4,0	1/1:6,5:11:4.82:29,5,0
chr10	109782032	.	T	TGAG	26391.77	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-10.468;DP=641;FS=7.121;HRun=0;HaplotypeScore=81.4355;InbreedingCoeff=0.9771;MQ=68.66;MQ0=0;MQRankSum=-3.961;QD=47.21;ReadPosRankSum=1.417;VQSLOD=6.3319;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,36:41:84.29:1835,84,0	0/0:8,0:8:21.07:0,21,333	0/0:6,0:6:7.25:0,7,118	0/0:12,0:12:21.10:0,21,387	1/1:2,9:11:17.33:392,17,0	1/1:2,8:11:24.08:524,24,0	1/1:4,24:29:60.21:1311,60,0	1/1:5,23:30:75.23:1556,75,0	1/1:5,14:20:42.14:884,42,0	0/0:25,0:25:63.21:0,63,990	0/0:12,0:12:33.11:0,33,523	1/1:3,37:41:99:2346,108,0	1/1:3,21:24:54.19:1180,54,0	1/1:5,35:41:90.31:1964,90,0	1/1:2,25:27:60.21:1311,60,0	0/0:19,0:19:51.17:0,51,809	1/1:6,29:36:75.26:1639,75,0	1/1:7,34:42:96.33:2098,96,0	1/1:4,8:12:24.08:524,24,0	1/1:2,9:12:24.08:521,24,0	1/1:10,42:55:93.23:1941,93,0	1/1:5,9:15:30.10:650,30,0	1/1:2,11:14:30.10:621,30,0	1/1:2,29:31:69.24:1508,69,0	1/1:1,13:15:36.12:783,36,0	1/1:1,21:22:66.23:1427,66,0	1/1:1,18:19:42.14:918,42,0	1/1:4,7:11:21.07:459,21,0
chr10	109782528	.	AG	A	1567.98	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=1.147;DP=527;FS=5.136;HRun=2;HaplotypeScore=64.4120;InbreedingCoeff=0.9577;MQ=57.75;MQ0=28;MQRankSum=1.735;QD=16.16;ReadPosRankSum=0.543;VQSLOD=3.5873;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:65.16:0,65,549	0/0:10,0:10:23.35:0,23,196	0/0:33,0:6:14.16:0,14,85	0/0:38,0:13:5.11:0,5,109	0/0:19,0:17:32.79:0,33,277	0/0:17,0:16:35.30:0,35,404	0/0:13,0:13:29.94:0,30,264	0/0:25,0:24:54.01:0,54,453	0/0:9,0:8:22.75:0,23,171	0/0:25,0:23:50.44:0,50,451	0/0:12,0:11:23.18:0,23,162	1/1:12,0:13:35.58:281,36,0	1/1:15,0:14:29.79:250,30,0	1/1:11,1:11:23.23:154,23,0	1/1:22,1:23:62.69:502,63,0	0/0:28,0:28:64.64:0,65,515	0/0:24,0:24:53.04:0,53,459	0/0:22,0:21:47.32:0,47,358	0/0:29,0:28:73.41:0,73,550	0/0:11,0:9:20.43:0,20,163	0/0:11,0:9:17.72:0,18,143	1/1:10,1:12:35.73:273,36,0	1/1:12,1:12:29.83:229,30,0	1/1:9,0:7:8.98:73,9,0	0/0:12,0:12:22.95:0,23,267	0/0:26,0:26:60.87:0,61,509	0/0:27,0:26:65.04:0,65,508	0/0:9,0:8:20.27:0,20,143
chr10	109786564	.	C	CT	25031.01	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-9.410;DP=744;FS=4.176;HRun=2;HaplotypeScore=76.1809;InbreedingCoeff=0.9972;MQ=79.29;MQ0=0;MQRankSum=-5.376;QD=39.67;ReadPosRankSum=4.261;VQSLOD=5.3218;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:35:93.31:1339,93,0	0/0:6,0:6:18.06:0,18,221	0/0:20,0:20:53.70:0,54,590	0/0:24,0:23:52.34:0,52,591	1/1:0,15:15:45.15:648,45,0	1/1:1,31:32:84.28:1210,84,0	1/1:2,38:40:99:1620,114,0	1/1:3,35:38:99:1494,105,0	1/1:0,25:25:75.25:1080,75,0	0/0:24,0:24:66.21:0,66,818	0/0:11,0:11:30.09:0,30,371	1/1:4,45:49:99:1857,129,0	1/1:0,29:29:84.28:1210,84,0	1/1:1,27:28:66.22:939,66,0	1/1:2,24:26:66.22:951,66,0	0/0:28,0:28:72.37:0,72,887	1/1:2,34:36:96.32:1382,96,0	1/1:2,39:41:99:1642,114,0	1/1:1,31:32:93.28:1317,93,0	1/1:0,13:13:39.13:561,39,0	1/1:0,58:58:99:2463,172,0	1/1:0,15:15:45.15:648,45,0	1/1:1,7:9:27.09:370,27,0	1/1:1,35:36:96.32:1382,96,0	1/1:1,25:26:72.24:1036,72,0	1/1:0,19:19:57.17:800,57,0	1/1:0,18:18:54.18:777,54,0	1/1:0,11:11:21.07:302,21,0
chr10	109791123	.	AGTGTGTGTGTGTGTGTGT	A	5406.70	PASS	AB=0.854;AC=28;AF=0.519;AN=54;BaseQRankSum=7.093;DP=602;FS=3.120;HRun=0;HaplotypeScore=249.8637;InbreedingCoeff=0.5415;MQ=69.21;MQ0=21;MQRankSum=-3.415;QD=15.10;ReadPosRankSum=2.783;VQSLOD=3.4230;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,6:37:6.02:254,6,0	0/0:6,0:6:12.04:0,12,883	0/0:39,0:26:3.01:0,3,34	0/0:35,0:23:15.05:0,15,356	0/0:10,0:9:12.04:0,12,625	0/0:11,0:11:15.05:0,15,823	0/0:34,0:34:54.15:0,54,2981	0/1:21,0:20:1.33:65,0,1	0/0:13,0:13:21.07:0,21,1048	0/0:27,0:26:44.74:0,45,2719	0/0:14,0:14:12.04:0,12,538	1/1:25,0:25:27.09:921,27,0	1/1:20,0:20:17.99:447,18,0	1/1:18,0:18:18.06:528,18,0	1/1:21,0:21:9.03:389,9,0	0/0:15,0:26:15.04:0,15,805	0/1:21,4:25:99:281,0,132	1/1:17,6:22:1.21:142,1,0	./.	1/1:8,4:12:3.01:145,3,0	0/1:30,11:39:59.68:70,0,60	1/1:19,0:18:15.02:412,15,0	1/1:13,0:12:3.01:126,3,0	1/1:33,0:33:15.05:506,15,0	0/0:16,0:17:18.06:0,18,1125	0/1:17,1:22:99:580,0,682	1/1:13,1:17:7.41:394,7,0	1/1:5,1:6:3.01:145,3,0
chr10	109791155	.	TGTGTGTGTGTGTGTGTGTGC	T	6547.91	PASS	AB=0.997;AC=25;AF=0.446;AN=56;BaseQRankSum=8.102;DP=536;FS=0.480;HRun=0;HaplotypeScore=205.5137;InbreedingCoeff=0.2710;MQ=44.27;MQ0=30;MQRankSum=-1.968;QD=18.92;ReadPosRankSum=0.702;VQSLOD=3.8469;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:24:99:139,0,115	0/0:11,0:10:16.77:0,17,1059	0/0:6,0:1:3.01:0,3,34	0/0:12,0:6:15.05:0,15,355	0/0:9,0:8:12.04:0,12,631	0/0:13,0:13:15.05:0,15,789	0/0:39,0:39:28.53:0,29,3457	0/1:15,0:13:65.20:65,0,76	0/0:20,0:18:3.02:0,3,1603	0/0:22,0:21:53.70:0,54,3054	0/0:12,0:12:18.05:0,18,783	1/1:22,6:28:50.04:1361,50,0	1/1:16,2:18:41.75:688,42,0	1/1:26,4:27:29.98:774,30,0	1/1:11,2:12:20.76:587,21,0	0/0:25,0:25:23.91:0,24,1129	0/1:30,1:29:99:148,0,289	0/1:24,0:22:70.24:70,0,182	0/1:6,0:3:4.32:35,0,4	0/1:15,0:15:74.64:75,0,129	0/1:42,0:37:65.23:65,0,171	1/1:12,4:15:18.01:551,18,0	1/1:8,1:8:6:174,6,0	1/1:33,3:33:32.69:787,33,0	0/0:20,0:19:18.06:0,18,1105	0/1:22,0:20:99:554,0,1033	0/1:10,0:10:22.24:380,0,22	1/1:5,0:4:2.97:95,3,0
chr10	109791173	.	TGC	T	1977.45	PASS	AB=0.778;AC=25;AF=0.463;AN=54;BaseQRankSum=6.585;DP=500;FS=4.578;HRun=0;HaplotypeScore=115.8447;InbreedingCoeff=0.8369;MQ=49.73;MQ0=18;MQRankSum=0.802;QD=8.27;ReadPosRankSum=2.867;VQSLOD=2.9948;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:22.13:0,22,176	0/0:10,0:9:8.76:0,9,83	1/1:3,0:3:4.96:23,5,0	0/1:5,0:4:8.21:8,0,11	./.	1/1:3,9:12:3.01:38,3,0	1/1:33,0:33:32.25:250,32,0	0/0:17,0:15:11.28:0,11,154	1/1:19,0:17:29.59:223,30,0	0/0:20,0:19:27:0,27,326	0/0:5,0:5:11.96:0,12,97	1/1:32,0:32:62.07:480,62,0	1/1:12,0:12:29.74:217,30,0	1/1:31,0:28:26.31:184,26,0	1/1:14,0:13:29.80:245,30,0	0/0:23,0:23:23.65:0,24,221	0/0:30,0:29:41.79:0,42,249	0/0:24,0:22:28.49:0,28,278	0/0:11,0:9:26.58:0,27,188	0/0:14,0:14:22.37:0,22,154	0/0:42,0:39:47.42:0,47,336	1/1:12,0:12:11.98:99,12,0	1/1:8,0:8:8.98:73,9,0	1/1:34,0:31:29.57:236,30,0	1/1:7,12:18:9.03:111,9,0	0/0:22,0:21:36.04:0,36,301	0/0:15,0:15:22.46:0,22,177	0/0:4,0:3:5.16:0,5,20
chr10	109791234	.	CAT	C	9073.03	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.668;DP=730;FS=3.091;HRun=0;HaplotypeScore=123.0728;InbreedingCoeff=0.9980;MQ=90.35;MQ0=0;MQRankSum=-2.828;QD=43.41;ReadPosRankSum=5.129;VQSLOD=6.2869;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,147,2947	0/0:8,0:8:24.08:0,24,486	0/0:29,0:29:84.24:0,84,1585	0/0:32,0:32:50.92:0,51,1545	0/0:15,0:15:45.15:0,45,902	0/0:22,0:21:51.18:0,51,1025	0/0:34,0:34:99:0,99,1994	0/0:31,0:30:90.27:0,90,1752	0/0:23,0:23:66.23:0,66,1340	0/0:27,0:27:78.20:0,78,1534	0/0:9,0:9:27.09:0,27,549	1/1:0,46:46:99:2150,132,0	1/1:0,31:31:90.31:1466,90,0	1/1:0,30:30:81.28:1318,81,0	1/1:0,20:21:63.22:1024,63,0	0/0:20,0:20:60.21:0,60,1219	0/0:32,0:32:84.29:0,84,1703	0/0:25,0:25:72.25:0,72,1459	0/0:23,0:23:66.19:0,66,1294	0/0:17,0:17:51.18:0,51,1036	0/0:47,0:47:99:0,126,2520	1/1:0,28:28:66.18:1075,66,0	1/1:0,19:18:39.13:635,39,0	1/1:0,34:34:87.30:1405,87,0	0/0:21,0:21:57.20:0,57,1158	0/0:26,0:26:78.27:0,78,1577	0/0:23,0:23:69.24:0,69,1402	0/0:6,0:6:18.06:0,18,366
chr10	109791373	.	CAGT	C	26835.92	PASS	AB=0.521;AC=43;AF=0.768;AN=56;BaseQRankSum=10.872;DP=800;FS=12.318;HRun=0;HaplotypeScore=173.8924;InbreedingCoeff=0.8992;MQ=72.35;MQ0=0;MQRankSum=-9.814;QD=40.35;ReadPosRankSum=6.571;VQSLOD=5.2739;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,49:49:99:1997,108,0	0/0:11,0:11:33.11:0,33,803	0/0:36,0:33:99:0,99,1940	0/0:28,0:26:52.61:0,53,1192	1/1:0,13:13:26.92:460,27,0	1/1:0,28:28:66.18:1182,66,0	1/1:0,35:35:75.26:1381,75,0	1/1:1,29:30:77.99:1187,78,0	1/1:0,26:26:66.23:1221,66,0	0/0:21,0:21:60.17:0,60,1250	0/0:10,0:10:30.07:0,30,638	1/1:0,41:41:93.32:1715,93,0	1/1:0,33:33:90.31:1658,90,0	1/1:0,31:31:72.25:1329,72,0	1/1:0,38:37:96:1724,96,0	0/0:28,0:28:84.26:0,84,1933	1/1:0,33:33:78.27:1442,78,0	1/1:0,31:31:78.22:1391,78,0	1/1:0,24:24:59.95:889,60,0	1/1:0,15:15:29.68:469,30,0	1/1:0,53:53:83.31:1557,83,0	1/1:0,21:21:45.15:822,45,0	1/1:0,24:24:51.11:830,51,0	1/1:1,46:47:99:1781,99,0	1/1:0,17:17:30.10:554,30,0	0/1:3,35:38:61.15:1515,0,61	1/1:0,27:27:63.16:1122,63,0	1/1:0,11:11:33.11:610,33,0
chr10	109791573	.	ATGTG	A	14235.61	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-0.909;DP=668;FS=1.106;HRun=0;HaplotypeScore=155.1657;InbreedingCoeff=0.9700;MQ=71.34;MQ0=0;MQRankSum=-5.576;QD=34.30;ReadPosRankSum=4.645;VQSLOD=4.8773;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,35:43:99:1687,99,0	0/0:15,0:15:33.11:0,33,818	0/0:33,0:31:59.90:0,60,1256	0/0:38,0:33:56.86:0,57,1601	0/0:2,0:22:50.20:0,50,225	0/0:9,0:27:47.45:0,47,228	0/0:4,0:28:58.34:0,58,260	1/1:11,16:27:48.10:735,48,0	0/0:2,0:17:39.18:0,39,182	0/0:22,0:22:51.18:0,51,1278	0/0:13,0:13:30.10:0,30,738	1/1:5,25:30:66.18:1094,66,0	1/1:6,30:36:93.32:1586,93,0	1/1:1,19:20:39.13:665,39,0	1/1:6,30:36:81.28:1381,81,0	0/0:24,0:24:51.18:0,51,1259	1/1:7,20:27:54.14:890,54,0	1/1:2,9:11:21.07:358,21,0	1/1:8,5:13:15.04:231,15,0	1/1:2,10:12:30.06:469,30,0	1/1:3,18:21:45.15:754,45,0	1/1:5,19:24:51.09:808,51,0	1/1:4,13:17:30.02:449,30,0	1/1:9,18:27:42.10:685,42,0	0/0:2,0:13:29.85:0,30,176	1/1:5,26:31:3.08:1125,3,0	1/1:5,23:28:66.14:1063,66,0	1/1:5,6:11:15.05:256,15,0
chr10	109791923	.	A	AGTGTGT	9058.23	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=-5.572;DP=666;FS=15.083;HRun=0;HaplotypeScore=139.8532;InbreedingCoeff=0.8492;MQ=55.83;MQ0=4;MQRankSum=-10.909;QD=33.67;ReadPosRankSum=-4.024;VQSLOD=2.8513;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,17:41:45.07:1356,45,0	0/0:12,0:12:27.08:0,27,515	0/1:12,0:7:17.72:18,0,145	0/1:8,0:3:6.07:6,0,35	0/0:25,0:25:45.14:0,45,906	0/0:26,0:26:69.24:0,69,1480	0/0:27,0:27:69.24:0,69,1430	1/1:18,4:23:30.07:724,30,0	0/0:28,0:28:69.22:0,69,1415	0/0:35,0:36:72.24:0,72,1482	0/0:18,0:18:33.10:0,33,662	0/0:32,0:32:69.24:0,69,1475	0/0:18,0:18:42.14:0,42,893	0/0:22,0:22:54.18:0,54,1135	0/0:33,0:33:75.24:0,75,1551	0/0:29,0:29:75.24:0,75,1569	1/1:12,9:24:30.08:939,30,0	1/1:6,7:13:21.96:703,22,0	1/1:22,10:34:48.15:1306,48,0	1/1:8,5:16:9.03:300,9,0	1/1:22,14:36:11.81:400,12,0	0/0:18,0:18:45.14:0,45,926	0/0:20,0:20:45.15:0,45,945	0/0:36,0:36:90.31:0,90,1904	0/0:17,0:17:36.12:0,36,772	1/1:4,16:25:63.20:1767,63,0	1/1:13,10:25:33.11:1039,33,0	1/1:4,4:10:15.05:501,15,0
chr10	109792103	.	C	CTT	9910.08	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=5.005;DP=696;FS=0.355;HRun=12;HaplotypeScore=164.1356;InbreedingCoeff=0.9281;MQ=61.51;MQ0=4;MQRankSum=-6.209;QD=21.09;ReadPosRankSum=0.914;VQSLOD=2.5408;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,11:37:62.06:733,62,0	0/0:6,0:6:15:0,15,139	0/0:27,0:21:23.31:0,23,194	0/1:15,0:9:2.96:3,0,32	0/0:21,0:25:46.93:0,47,436	0/0:17,0:18:35.61:0,36,303	0/0:21,0:23:41.25:0,41,385	1/1:27,11:39:63.93:718,64,0	0/0:25,0:25:8.75:0,9,377	0/0:22,0:24:47.42:0,47,412	0/0:13,0:15:32.69:0,33,287	1/1:28,0:28:72.02:682,72,0	1/1:26,0:26:69:656,69,0	1/1:27,0:27:71.94:691,72,0	1/1:32,0:31:83.91:799,84,0	0/0:30,0:31:69.05:0,69,660	1/1:14,10:24:42.03:503,42,0	1/1:10,7:19:41.46:473,41,0	1/1:18,10:31:64.53:718,65,0	1/1:23,12:36:77.83:830,78,0	1/1:15,7:20:41.57:485,42,0	1/1:36,0:35:84:812,84,0	1/1:23,0:23:50.87:496,51,0	1/1:21,0:20:36:352,36,0	0/0:28,0:29:59.20:0,59,516	1/1:18,5:26:46.33:486,46,0	1/1:6,4:13:9.12:311,9,0	1/1:4,3:6:16.54:162,17,0
chr10	109792110	.	T	TTG	8933.17	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=3.562;DP=698;FS=6.702;HRun=0;HaplotypeScore=159.2306;InbreedingCoeff=0.3278;MQ=58.90;MQ0=5;MQRankSum=-6.618;QD=19.68;ReadPosRankSum=6.849;VQSLOD=4.3890;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:37:99:186,0,154	0/0:6,0:6:18.05:0,18,244	0/0:28,0:19:56.29:0,56,574	0/0:19,0:11:19.73:0,20,212	0/0:28,0:27:72.37:0,72,875	0/0:19,0:19:48.97:0,49,599	0/0:20,0:20:59.84:0,60,726	0/1:38,0:33:99:133,0,137	0/0:24,0:24:55.95:0,56,837	0/0:25,0:25:72.16:0,72,881	0/0:16,0:16:45.07:0,45,559	1/1:5,24:29:77.02:1204,77,0	1/1:5,20:25:72.58:1115,73,0	1/1:6,20:29:76.54:1190,77,0	1/1:10,24:33:88.02:1322,88,0	0/0:32,0:31:93.04:0,93,1212	0/1:25,0:23:99:142,0,109	1/1:18,0:18:3.16:127,3,0	0/1:30,0:29:99:122,0,208	0/1:33,0:32:99:169,0,176	0/1:20,0:17:11.69:107,0,12	1/1:9,26:36:99:1456,100,0	1/1:9,14:23:56.28:847,56,0	1/1:6,14:19:47.90:682,48,0	0/0:27,0:27:75.07:0,75,942	0/1:30,0:29:46.06:46,0,288	0/1:15,0:14:61.19:61,0,123	0/1:9,0:8:24.16:24,0,52
chr10	109792138	.	TG	T	1370.08	PASS	AB=0.970;AC=13;AF=0.232;AN=56;BaseQRankSum=-0.572;DP=677;FS=1.407;HRun=1;HaplotypeScore=157.1896;InbreedingCoeff=-0.2723;MQ=49.84;MQ0=2;MQRankSum=1.073;QD=4.38;ReadPosRankSum=-2.196;VQSLOD=-0.4298;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:99:114,0,194	0/0:5,0:5:15.05:0,15,240	0/0:35,0:28:84.15:0,84,1160	0/0:26,0:13:35.85:0,36,494	0/1:23,0:22:99:110,0,134	0/0:18,0:18:14.40:0,14,88	0/0:24,0:24:17.05:0,17,194	0/1:24,0:17:99:233,0,151	0/1:20,0:20:3.60:4,0,70	0/0:38,0:38:99:0,111,1699	0/0:19,0:19:57.09:0,57,839	0/0:34,0:34:7.36:0,7,342	0/1:25,0:25:14.90:15,0,181	0/0:27,0:27:18:0,18,268	0/0:36,0:36:36.51:0,37,185	0/0:27,0:26:81.26:0,81,1251	0/0:23,0:23:24.49:0,24,150	0/1:7,13:20:66.01:288,0,66	0/1:24,0:23:99:120,0,430	0/1:23,0:22:63.01:63,0,124	0/1:17,0:17:5.84:16,0,6	0/1:36,0:36:99:227,0,219	0/1:23,0:23:20.91:21,0,110	0/1:22,0:22:7.63:8,0,183	0/0:27,0:27:39.28:0,39,227	0/1:24,0:23:99:300,0,132	0/0:18,0:18:4.81:0,5,26	0/0:7,0:7:4.44:0,4,14
chr10	109792139	.	G	GTTGTT	26143.84	PASS	AB=0.543;AC=43;AF=0.768;AN=56;BaseQRankSum=2.024;DP=710;FS=11.321;HRun=0;HaplotypeScore=137.1380;InbreedingCoeff=0.8574;MQ=50.76;MQ0=2;MQRankSum=-9.568;QD=46.85;ReadPosRankSum=2.854;VQSLOD=4.6366;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,23:33:65.02:1680,65,0	0/0:5,0:5:15.05:0,15,274	0/0:33,0:27:81.14:0,81,1334	0/0:27,0:14:35.89:0,36,561	1/1:7,15:23:53.88:1299,54,0	1/1:0,18:21:33.11:998,33,0	1/1:4,19:25:30.10:840,30,0	1/1:5,19:21:63.15:1272,63,0	1/1:0,18:19:21.07:655,21,0	0/0:38,0:38:99:0,105,2041	0/0:19,0:19:51.16:0,51,981	1/1:8,26:35:60.15:1620,60,0	1/1:5,19:28:57.18:1642,57,0	1/1:6,20:28:48.15:1392,48,0	1/1:4,33:38:72.23:2102,72,0	0/0:29,0:28:78.27:0,78,1595	1/1:4,19:26:27.09:812,27,0	1/1:16,2:20:47.36:938,47,0	1/1:11,12:25:69.13:1608,69,0	1/1:5,17:24:57.15:1422,57,0	1/1:0,16:19:6.02:182,6,0	1/1:7,29:38:93.27:2374,93,0	1/1:3,18:22:42.09:1065,42,0	1/1:6,16:25:38.13:988,38,0	1/1:5,20:27:39.13:1152,39,0	0/1:4,19:24:22.57:1354,0,23	1/1:0,18:20:17.90:562,18,0	1/1:0,6:7:6.02:188,6,0
chr10	109798515	.	T	TGC	523.50	PASS	AB=0.994;AC=11;AF=0.196;AN=56;BaseQRankSum=13.037;DP=695;FS=15.408;HRun=0;HaplotypeScore=117.6469;InbreedingCoeff=-0.0496;MQ=60.06;MQ0=13;MQRankSum=-1.406;QD=1.65;ReadPosRankSum=9.401;VQSLOD=-0.0243;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:41:55.36:55,0,112	0/0:12,0:11:24.02:0,24,316	0/0:19,0:5:2.10:0,2,34	0/0:17,0:4:3.48:0,3,12	0/1:19,0:19:26.33:55,0,26	1/1:12,1:13:7.40:68,7,0	0/1:49,3:52:67.93:307,0,68	0/0:15,0:14:33.59:0,34,253	0/1:25,0:25:34.39:34,0,183	0/0:25,0:24:48.83:0,49,787	0/0:15,0:15:38.97:0,39,517	0/0:43,0:43:62.57:0,63,1493	0/0:21,0:21:60.10:0,60,754	0/0:26,0:26:74.88:0,75,898	0/0:33,0:33:80.52:0,81,899	0/0:16,0:14:35.98:0,36,375	0/1:40,0:40:28.89:77,0,29	0/1:34,0:33:26.38:26,0,142	0/0:15,0:15:21.02:0,21,228	0/0:4,0:4:0.98:0,1,3	0/1:66,0:66:12.53:13,0,482	0/0:16,0:16:47.62:0,48,567	0/0:14,0:14:30:0,30,358	0/0:39,0:39:94.58:0,95,1364	0/1:19,0:19:7.26:7,0,44	0/0:29,0:29:20.54:0,21,363	0/0:19,0:19:6.13:0,6,130	0/1:8,0:8:13.43:24,0,13
chr10	109798517	.	T	TGCGC	3571.14	PASS	AB=0.580;AC=22;AF=0.393;AN=56;BaseQRankSum=5.531;DP=684;FS=2.333;HRun=0;HaplotypeScore=125.3333;InbreedingCoeff=0.3403;MQ=60.51;MQ0=11;MQRankSum=-0.955;QD=9.02;ReadPosRankSum=6.509;VQSLOD=2.5496;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:40:14.03:134,0,14	0/0:12,0:11:21.04:0,21,294	0/0:17,0:4:9:0,9,106	0/0:15,0:3:0:0,0,0	1/1:2,17:20:15.05:388,15,0	1/1:2,11:13:9.03:192,9,0	1/1:11,42:55:63.68:1506,64,0	0/1:6,0:14:3.51:4,0,46	1/1:7,15:23:15.05:387,15,0	0/0:24,0:23:60.16:0,60,942	0/0:14,0:14:36.12:0,36,623	0/0:44,0:44:99:0,113,1744	0/0:21,0:21:57.18:0,57,946	0/0:25,0:25:51.10:0,51,739	0/0:32,0:32:77.89:0,78,1162	0/0:15,0:13:36.11:0,36,553	1/1:4,0:40:14.37:238,14,0	0/1:7,0:33:99:140,0,118	0/1:2,0:15:15.01:38,0,15	1/1:1,0:5:2.80:13,3,0	0/1:19,0:61:87.18:179,0,87	0/0:16,0:16:45.12:0,45,691	0/0:15,0:15:24.08:0,24,390	0/0:38,0:38:88.76:0,89,1753	1/1:3,16:22:4.40:227,4,0	0/1:9,0:27:67.11:67,0,146	0/1:8,0:19:10.60:11,0,77	0/1:1,0:8:23.41:48,0,23
chr10	109800484	.	AAGGTGAGC	A	14504.72	PASS	AB=0.543;AC=18;AF=0.321;AN=56;BaseQRankSum=17.499;DP=690;FS=4.881;HRun=0;HaplotypeScore=185.7757;InbreedingCoeff=0.8354;MQ=88.18;MQ0=0;MQRankSum=-17.133;QD=61.72;ReadPosRankSum=-0.568;VQSLOD=4.2022;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:34:66.23:1883,66,0	0/0:15,0:15:42.14:0,42,1791	0/0:29,0:29:82.07:0,82,3116	0/0:31,0:31:87.27:0,87,3293	0/0:21,0:21:57.20:0,57,2517	0/0:18,0:18:51.18:0,51,2279	0/0:26,0:26:78.27:0,78,3445	1/1:6,30:36:87.25:2312,87,0	0/0:26,0:26:75.26:0,75,3238	0/0:30,0:30:84.29:0,84,3710	0/0:10,0:10:27.09:0,27,1117	0/0:29,0:29:84.29:0,84,3731	0/0:23,0:23:63.19:0,63,2586	0/0:25,0:25:75.26:0,75,3170	0/0:40,0:40:99:0,117,5110	0/0:26,0:26:75.26:0,75,3354	1/1:1,16:17:36.04:1032,36,0	1/1:3,14:17:36.08:965,36,0	1/1:4,7:11:21.51:503,22,0	0/1:2,19:21:80.01:1342,0,80	1/1:0,17:17:30.10:861,30,0	0/0:20,0:20:57.20:0,57,2352	0/0:17,0:17:48.16:0,48,1953	0/0:45,0:45:99:0,135,5560	0/0:24,0:24:63.22:0,63,2611	0/1:7,25:32:52.93:2013,0,53	1/1:2,31:32:81.28:2303,81,0	1/1:2,15:17:45.15:1291,45,0
chr10	109801014	.	TTGTG	T	12248.85	PASS	AB=0.767;AC=44;AF=0.786;AN=56;BaseQRankSum=3.513;DP=765;FS=1.127;HRun=0;HaplotypeScore=129.9215;InbreedingCoeff=0.7214;MQ=64.71;MQ0=14;MQRankSum=1.061;QD=18.36;ReadPosRankSum=3.975;VQSLOD=4.5150;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,26:45:53.74:847,54,0	0/0:5,0:6:14.77:0,15,233	0/0:27,0:17:8.71:0,9,92	0/0:25,0:14:10.59:0,11,60	1/1:8,13:21:29.94:431,30,0	1/1:6,9:16:17.57:238,18,0	1/1:10,22:32:35.92:556,36,0	1/1:32,2:38:5.10:515,5,0	1/1:7,20:26:38.92:605,39,0	0/0:25,0:25:47.38:0,47,950	0/0:13,0:14:29.01:0,29,541	1/1:8,30:39:54.18:865,54,0	1/1:8,29:37:45.15:718,45,0	1/1:6,23:31:54.10:806,54,0	1/1:8,26:35:48.06:789,48,0	0/1:17,1:18:10.43:10,0,627	1/1:9,18:29:39.06:619,39,0	1/1:2,14:17:30.10:472,30,0	1/1:16,12:27:23.07:430,23,0	1/1:4,11:15:29.96:378,30,0	1/1:27,38:66:50.92:921,51,0	1/1:8,14:23:36.05:570,36,0	1/1:5,15:20:17.62:340,18,0	1/1:15,14:31:27.56:423,28,0	1/1:11,21:31:19.76:464,20,0	0/1:18,23:41:9.42:932,0,9	1/1:5,11:17:17.65:274,18,0	1/1:2,0:2:3.01:45,3,0
chr10	109806092	.	T	TCACACACACA	5856.43	PASS	AB=0.683;AC=30;AF=0.556;AN=54;BaseQRankSum=0.116;DP=638;FS=0.559;HRun=0;HaplotypeScore=196.8229;InbreedingCoeff=0.7142;MQ=62.08;MQ0=7;MQRankSum=-6.596;QD=15.58;ReadPosRankSum=-6.997;VQSLOD=1.6755;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:11.69:233,12,0	0/0:9,0:10:9.03:0,9,208	1/1:28,0:10:1.55:4,2,0	./.	0/1:12,0:21:4.96:5,0,24	0/1:8,0:16:20.58:105,0,21	1/1:18,0:28:7.38:136,7,0	1/1:31,0:29:33.87:549,34,0	1/1:16,0:25:5.56:31,6,0	0/0:25,0:26:26.97:0,27,631	0/0:4,0:4:6.02:0,6,142	0/0:21,0:28:47.88:0,48,1096	0/0:16,0:19:21.07:0,21,581	0/0:27,0:28:33.54:0,34,881	0/0:27,0:29:35.79:0,36,915	0/0:17,0:20:32.98:0,33,790	1/1:18,5:24:18.06:728,18,0	1/1:14,4:19:21.06:746,21,0	1/1:11,0:10:6.02:147,6,0	1/1:12,1:13:3.01:115,3,0	1/1:45,0:45:30.10:822,30,0	0/0:19,0:20:12.12:0,12,704	0/0:5,0:8:5.76:0,6,59	0/0:29,0:34:60.15:0,60,1422	1/1:16,0:16:9.03:310,9,0	1/1:20,4:27:32.76:824,33,0	1/1:19,0:24:12.51:429,13,0	1/1:14,0:14:18.06:671,18,0
chr10	109808118	.	GA	G	1210.11	PASS	AB=0.932;AC=14;AF=0.250;AN=56;BaseQRankSum=8.255;DP=535;FS=8.827;HRun=11;HaplotypeScore=58.1275;InbreedingCoeff=0.6413;MQ=65.86;MQ0=2;MQRankSum=0.200;QD=7.52;ReadPosRankSum=1.029;VQSLOD=1.4100;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,5:50:37.07:0,37,1185	0/0:7,0:8:20.88:0,21,199	0/1:15,0:11:9.65:10,0,70	0/0:22,0:15:15.76:0,16,258	1/1:3,16:19:43.18:347,43,0	1/1:0,10:10:29.97:246,30,0	1/1:6,18:22:41.92:345,42,0	0/0:26,1:27:38.46:0,38,590	1/1:0,12:13:26.48:204,26,0	0/0:17,1:17:20.47:0,20,423	0/0:16,0:16:36.05:0,36,358	0/0:18,0:18:36.07:0,36,373	0/0:12,1:13:1.58:0,2,230	0/0:12,2:15:14.28:0,14,334	0/1:17,2:18:10.20:10,0,305	0/0:12,1:14:8.31:0,8,277	0/1:22,2:24:1.16:1,0,400	0/0:23,4:28:29.91:0,30,506	0/0:18,0:18:17.56:0,18,384	0/0:13,0:13:33.07:0,33,345	0/0:25,1:26:46.33:0,46,670	0/0:9,0:10:17.20:0,17,218	0/0:15,1:16:14.44:0,14,352	0/0:22,0:22:57.14:0,57,607	1/1:6,12:18:26.95:222,27,0	0/0:23,1:24:35.49:0,35,569	0/0:14,1:14:11.43:0,11,318	0/1:16,2:18:1.16:1,0,398
chr10	109808242	.	TAC	T	469.92	PASS	AB=0.920;AC=24;AF=0.462;AN=52;BaseQRankSum=1.924;DP=422;FS=1.953;HRun=0;HaplotypeScore=56.3096;InbreedingCoeff=0.1296;MQ=56.06;MQ0=12;MQRankSum=1.829;QD=2.39;ReadPosRankSum=0.938;VQSLOD=1.3041;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,3:28:69.04:69,0,195	1/1:3,2:5:2.99:33,3,0	./.	./.	0/0:2,0:9:6:0,6,52	0/0:12,0:12:5.97:0,6,46	0/0:23,0:28:18.04:0,18,226	0/0:25,0:21:12.86:0,13,119	0/0:9,0:9:6.01:0,6,72	0/0:18,0:18:7.18:0,7,114	0/1:7,0:7:22.62:23,0,80	1/1:9,2:11:9:89,9,0	1/1:2,0:2:3.01:33,3,0	1/1:8,0:11:2.84:14,3,0	1/1:16,4:20:7.91:77,8,0	0/1:8,2:10:23.61:24,0,60	0/0:24,1:25:3.48:0,3,435	0/0:21,0:21:15.01:0,15,181	0/1:14,0:14:23.60:24,0,80	0/0:10,0:10:15.05:0,15,214	0/1:23,1:23:20.60:21,0,100	1/1:7,0:7:0.47:1,0,0	1/1:4,1:5:2.88:32,3,0	1/1:13,6:20:14.71:126,15,0	0/0:15,0:19:20.91:0,21,244	0/1:8,1:9:20.65:21,0,91	0/1:10,2:12:20.63:21,0,66	0/1:8,1:9:26.60:27,0,39
chr10	109810243	.	CA	C	8553.65	PASS	AB=0.571;AC=43;AF=0.768;AN=56;BaseQRankSum=6.992;DP=648;FS=0.000;HRun=10;HaplotypeScore=89.4235;InbreedingCoeff=0.9229;MQ=63.94;MQ0=3;MQRankSum=1.295;QD=15.93;ReadPosRankSum=2.397;VQSLOD=5.2316;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:83.98:729,84,0	0/0:9,0:9:18.05:0,18,199	0/0:15,0:9:21.36:0,21,198	0/0:18,1:11:14.88:0,15,132	1/1:5,41:46:99:1011,117,0	1/1:4,22:26:65.95:573,66,0	1/1:0,15:15:35.97:307,36,0	1/1:7,24:31:41.80:591,42,0	1/1:1,18:19:50.97:443,51,0	0/0:28,0:29:66.01:0,66,711	0/0:19,0:20:47.92:0,48,496	1/1:1,0:20:32.59:96,33,0	1/1:1,0:14:20.37:60,20,0	1/1:3,0:23:36.66:108,37,0	1/1:5,0:26:34.63:102,35,0	0/0:18,1:19:25.08:0,25,505	1/1:8,22:30:28.41:507,28,0	1/1:3,19:23:25.37:440,25,0	1/1:4,10:14:26.99:233,27,0	1/1:1,26:27:44.89:618,45,0	1/1:5,10:15:29.99:260,30,0	1/1:5,0:28:42.11:123,42,0	1/1:2,0:17:24.36:72,24,0	1/1:3,0:29:40.52:119,41,0	1/1:0,33:33:95.95:825,96,0	1/1:1,31:33:61.95:745,62,0	1/1:3,19:22:44.99:391,45,0	0/1:3,9:12:3.19:204,0,3
chr10	109815904	.	A	AAAAAC	5565.11	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-9.934;DP=712;FS=10.297;HRun=0;HaplotypeScore=120.9115;InbreedingCoeff=0.9582;MQ=67.43;MQ0=1;MQRankSum=-1.459;QD=41.53;ReadPosRankSum=-1.103;VQSLOD=4.3970;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:63.21:0,63,1131	0/0:9,0:9:18.02:0,18,242	0/0:21,0:17:3.03:0,3,229	0/0:21,0:19:26.88:0,27,328	1/1:6,21:33:66.05:1599,66,0	1/1:4,14:20:30.10:841,30,0	1/1:10,22:34:45.15:1271,45,0	0/0:31,0:31:41.78:0,42,646	1/1:4,15:21:33.11:936,33,0	0/0:33,0:33:75.20:0,75,1250	0/0:25,0:25:57.18:0,57,981	0/0:29,0:29:60.18:0,60,1040	0/0:17,0:17:45.14:0,45,798	0/0:24,0:24:57.19:0,57,996	0/0:29,0:29:66.21:0,66,1159	0/0:23,0:23:60.21:0,60,1106	0/0:33,0:33:63.08:0,63,1054	0/0:25,0:25:51.15:0,51,880	0/0:23,0:23:47.76:0,48,668	0/0:28,0:28:69.21:0,69,1200	0/0:20,0:20:45.09:0,45,694	0/0:34,0:34:81.26:0,81,1423	0/0:20,0:20:42.14:0,42,761	0/0:28,0:28:66.20:0,66,1142	1/1:8,14:26:33.11:918,33,0	0/0:34,0:34:84.27:0,84,1475	0/0:25,0:25:54.18:0,54,977	0/0:14,0:14:36.12:0,36,638
chr10	109817086	.	AAGTTTGAATACCAAGG	A	17878.86	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=14.005;DP=425;FS=0.888;HRun=0;HaplotypeScore=201.0899;InbreedingCoeff=0.9706;MQ=85.24;MQ0=0;MQRankSum=-13.896;QD=67.72;ReadPosRankSum=-0.215;VQSLOD=4.6083;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,17:27:36.12:1313,36,0	0/0:5,0:5:15.05:0,15,1168	0/0:23,0:23:66.66:0,67,3667	0/0:13,0:13:36.12:0,36,1982	0/0:6,0:6:15.05:0,15,1185	0/0:16,0:16:45.15:0,45,3127	0/0:25,0:25:69.21:0,69,4997	1/1:10,20:30:60.19:2383,60,0	0/0:23,0:23:69.24:0,69,4365	0/0:17,0:17:51.17:0,51,3521	0/0:7,0:7:21.06:0,21,1446	1/1:2,12:14:33.11:1465,33,0	1/1:4,15:19:39.13:1411,39,0	1/1:4,13:17:36.12:1522,36,0	1/1:5,21:26:48.16:1734,48,0	0/0:16,0:16:48.15:0,48,3053	1/1:7,11:18:29.94:1294,30,0	1/1:1,6:7:15.05:516,15,0	1/1:6,14:20:42.12:1742,42,0	1/1:5,5:10:15.05:531,15,0	1/1:5,9:14:20.91:521,21,0	1/1:2,12:14:27.09:750,27,0	1/1:3,3:6:10.28:279,10,0	1/1:5,11:16:14.87:442,15,0	0/0:10,0:10:30.10:0,30,2211	1/1:3,7:10:21.07:882,21,0	1/1:6,7:13:18.06:760,18,0	1/1:0,3:3:9.03:336,9,0
chr10	109817268	.	AT	A	678.44	PASS	AB=0.976;AC=21;AF=0.389;AN=54;BaseQRankSum=4.814;DP=179;FS=3.706;HRun=3;HaplotypeScore=27.7803;InbreedingCoeff=0.6015;MQ=52.94;MQ0=5;MQRankSum=1.014;QD=12.56;ReadPosRankSum=1.825;VQSLOD=2.1647;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:18.06:0,18,247	0/0:2,0:2:6.01:0,6,66	0/0:4,0:4:8.39:0,8,91	0/0:4,0:4:10.85:0,11,130	0/1:5,0:5:0.61:41,0,1	1/1:5,0:5:9.73:34,10,0	0/1:2,0:2:20.86:21,0,30	0/0:26,0:21:59.68:0,60,778	1/1:3,0:3:8.20:57,8,0	0/0:8,0:8:20.10:0,20,255	0/0:8,0:7:17.97:0,18,215	1/1:0,3:3:9.03:111,9,0	1/1:0,5:5:6.02:67,6,0	1/1:0,1:1:3.01:37,3,0	1/1:1,8:9:17.97:203,18,0	0/0:4,0:4:10.09:0,10,96	0/0:21,0:21:41.79:0,42,527	0/0:6,0:6:15.05:0,15,207	0/0:14,0:14:41.81:0,42,550	0/0:2,0:2:6.02:0,6,85	0/0:5,0:5:9.01:0,9,107	1/1:0,2:2:3.01:37,3,0	1/1:0,2:2:3.01:37,3,0	1/1:1,3:4:9.03:111,9,0	0/1:12,1:12:10.51:104,0,11	./.	0/0:9,0:9:27.05:0,27,351	0/0:6,0:6:8.82:0,9,96
chr10	109817281	.	A	AT	355.58	PASS	AC=8;AF=0.174;AN=46;BaseQRankSum=4.237;DP=127;FS=0.000;HRun=2;HaplotypeScore=23.9945;InbreedingCoeff=0.5238;MQ=46.19;MQ0=12;MQRankSum=2.038;QD=17.78;ReadPosRankSum=3.124;VQSLOD=3.6424;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:6.02:0,6,74	./.	1/1:2,0:2:1.25:3,1,0	0/0:1,0:1:0.89:0,1,2	./.	1/1:0,5:5:12.04:168,12,0	1/1:1,0:1:1.55:4,2,0	0/0:28,0:17:41.99:0,42,484	./.	0/0:3,0:3:8.99:0,9,96	0/0:5,0:4:8.89:0,9,74	0/0:3,0:3:6.02:0,6,74	0/0:3,0:3:5.81:0,6,50	0/0:1,0:1:0:0,0,0	0/0:6,0:6:15.01:0,15,164	0/0:4,0:4:8.96:0,9,68	0/0:17,0:17:26.89:0,27,295	0/0:4,0:4:12.04:0,12,142	0/0:9,0:9:14.98:0,15,165	0/0:2,0:2:3.01:0,3,37	0/0:1,0:1:3.01:0,3,37	0/0:1,0:1:0:0,0,0	0/0:1,0:1:2.96:0,3,19	./.	1/1:3,9:10:19.99:292,20,0	./.	0/0:7,0:7:21.04:0,21,238	0/0:5,0:5:2.96:0,3,19
chr10	109817299	.	ATTATTATTATTATAT	A	262.40	PASS	AB=0.778;AC=12;AF=0.333;AN=36;BaseQRankSum=1.073;DP=83;FS=15.592;HRun=0;HaplotypeScore=39.2075;InbreedingCoeff=0.3056;MQ=41.35;MQ0=17;MQRankSum=-1.169;QD=9.72;ReadPosRankSum=1.842;VQSLOD=-0.4224;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:3:0.89:0,1,2	./.	./.	0/0:1,0:1:2.92:0,3,17	./.	0/0:4,0:4:11.83:0,12,217	1/1:1,0:1:3.01:44,3,0	0/0:25,0:8:20.40:0,20,209	0/0:1,0:1:2.04:0,2,6	0/0:1,0:1:3.01:0,3,60	0/0:4,0:3:9.03:0,9,317	0/0:1,0:1:2.98:0,3,21	1/1:1,0:2:3.01:39,3,0	./.	1/1:2,0:2:5.81:46,6,0	0/0:3,0:3:9.03:0,9,231	0/1:2,8:10:12.57:129,0,13	./.	1/1:4,0:3:0.63:52,1,0	0/0:1,0:1:2.68:0,3,11	./.	./.	./.	./.	0/0:9,0:7:23.87:0,24,459	./.	0/1:3,0:3:12.62:13,0,31	1/1:5,0:5:3.01:56,3,0
chr10	109817302	.	ATTATTATTATAT	A	561.94	PASS	AB=0.962;AC=16;AF=0.444;AN=36;BaseQRankSum=-2.145;DP=80;FS=1.491;HRun=0;HaplotypeScore=30.1759;InbreedingCoeff=0.3297;MQ=40.39;MQ0=17;MQRankSum=-1.832;QD=11.02;ReadPosRankSum=-0.579;VQSLOD=1.2539;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:0.89:0,1,2	./.	./.	0/0:2,0:1:2.92:0,3,17	./.	0/0:3,0:3:9.03:0,9,162	1/1:1,0:1:1.55:4,2,0	0/1:22,0:7:58.97:82,0,59	0/0:1,0:1:1.82:0,2,5	0/0:1,0:1:3.01:0,3,44	0/0:4,0:3:9.03:0,9,234	0/0:1,0:1:0:0,0,0	1/1:2,0:2:2.98:21,3,0	./.	1/1:2,0:2:6.02:85,6,0	0/0:3,0:3:9.03:0,9,159	0/1:9,0:9:12.57:88,0,13	./.	1/1:2,1:2:6.02:170,6,0	1/1:0,0:1:3.01:39,3,0	./.	./.	./.	./.	0/0:8,0:6:20.66:0,21,302	./.	1/1:2,0:3:3.01:77,3,0	1/1:1,5:6:3.01:115,3,0
chr10	109817311	.	ATAT	A	378.54	PASS	AB=1.000;AC=15;AF=0.625;AN=24;BaseQRankSum=2.615;DP=83;FS=0.000;HRun=0;HaplotypeScore=19.2282;InbreedingCoeff=0.3380;MQ=46.00;MQ0=21;MQRankSum=-0.317;QD=10.82;ReadPosRankSum=0.713;VQSLOD=2.4167;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:0:0,0,0	./.	./.	0/0:9,0:3:8.68:0,9,67	./.	1/1:1,2:3:6.02:86,6,0	1/1:1,0:1:3.01:40,3,0	./.	1/1:3,0:2:2.99:32,3,0	./.	0/0:4,0:3:5.69:0,6,43	./.	./.	./.	1/1:1,1:2:6.02:68,6,0	0/0:3,0:3:3.01:0,3,48	0/1:9,0:9:12.57:26,0,13	./.	1/1:4,0:2:3.01:32,3,0	./.	./.	./.	./.	./.	1/1:5,2:6:12.04:164,12,0	./.	./.	1/1:6,0:6:3.01:32,3,0
chr10	109818058	.	CAA	C	4802.61	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-1.200;DP=570;FS=0.000;HRun=15;HaplotypeScore=82.2866;InbreedingCoeff=0.9208;MQ=57.59;MQ0=38;MQRankSum=-4.050;QD=13.05;ReadPosRankSum=0.608;VQSLOD=3.9192;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,26:36:68.66:565,69,0	0/0:4,0:6:11.52:0,12,112	0/0:17,0:1:3.01:0,3,31	0/0:16,0:7:11.06:0,11,73	0/0:5,2:32:5.85:0,6,160	0/0:3,1:16:9.53:0,10,118	0/0:6,1:15:7.38:0,7,97	1/1:11,18:32:50.29:476,50,0	0/0:7,0:18:18.39:0,18,100	0/0:14,0:14:36.11:0,36,460	0/0:22,0:24:62.68:0,63,792	1/1:7,0:13:25.01:122,25,0	1/1:7,0:18:23.05:111,23,0	1/1:7,0:13:24.64:111,25,0	1/1:6,0:17:24.83:112,25,0	0/0:10,0:10:30.05:0,30,369	1/1:9,19:30:44.10:398,44,0	1/1:4,20:21:38.64:388,39,0	1/1:8,17:26:53.56:450,54,0	1/1:4,17:22:47.52:451,48,0	1/1:3,6:9:11.85:150,12,0	1/1:5,1:14:25.17:127,25,0	1/1:8,0:20:24.71:110,25,0	1/1:3,1:12:24.95:119,25,0	0/0:5,0:24:40.44:0,40,170	1/1:8,23:29:51.27:504,51,0	1/1:7,16:23:50.82:437,51,0	1/1:1,6:7:20.74:170,21,0
chr10	109818700	.	TACACACACAC	T	909.46	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=4.932;DP=610;FS=5.045;HRun=0;HaplotypeScore=178.6747;InbreedingCoeff=0.7290;MQ=67.09;MQ0=22;MQRankSum=-1.824;QD=7.16;ReadPosRankSum=1.984;VQSLOD=2.5778;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:6.02:0,6,282	0/0:5,0:5:9.03:0,9,359	0/0:44,0:27:0.47:0,0,1	./.	1/1:10,6:17:1.88:54,2,0	1/1:14,5:19:9.03:264,9,0	1/1:25,0:26:15.01:215,15,0	0/0:20,0:18:8.97:0,9,168	1/1:15,3:18:12.04:277,12,0	0/0:21,0:21:30.09:0,30,947	0/0:7,0:8:6.02:0,6,239	0/0:19,0:19:18.06:0,18,814	0/0:6,0:7:9.03:0,9,374	0/0:22,0:20:15.02:0,15,607	1/1:18,0:22:13.64:201,14,0	0/0:20,0:20:32.69:0,33,1032	0/0:22,0:20:24.08:0,24,1001	0/0:24,0:25:32.47:0,32,1287	0/0:8,0:7:0.47:0,0,1	0/0:13,0:13:5.60:0,6,282	0/0:47,0:40:17.98:0,18,642	0/0:21,0:21:24.08:0,24,1060	0/0:16,0:15:15.05:0,15,704	0/0:45,0:45:45.14:0,45,1829	1/1:16,8:24:3.01:55,3,0	0/0:23,0:22:40.95:0,41,1595	0/0:15,0:15:17.81:0,18,665	0/0:7,0:7:8.99:0,9,287
chr10	109818800	.	T	TCACACACACA	8126.97	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-1.386;DP=677;FS=2.945;HRun=0;HaplotypeScore=231.8341;InbreedingCoeff=0.5538;MQ=53.23;MQ0=11;MQRankSum=-6.618;QD=17.44;ReadPosRankSum=-1.393;VQSLOD=3.9194;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:6.78:89,0,7	0/0:8,0:9:27.09:0,27,795	0/0:46,0:14:7.18:0,7,306	0/0:44,0:13:16.35:0,16,266	1/1:15,0:16:2.47:97,2,0	1/1:18,0:19:6:155,6,0	1/1:27,0:25:8.34:136,8,0	1/1:23,0:21:12.03:230,12,0	1/1:23,1:40:14.29:652,14,0	0/0:26,0:29:51.12:0,51,1286	0/0:17,0:21:48.15:0,48,1316	1/1:13,4:20:15.94:638,16,0	1/1:9,7:21:23.63:1039,24,0	1/1:17,5:26:26.93:1229,27,0	1/1:23,11:42:26.23:1231,26,0	0/0:23,0:23:60.17:0,60,1608	1/1:18,1:20:5.95:217,6,0	1/1:13,0:13:6.02:266,6,0	1/1:7,0:6:6.01:121,6,0	1/1:20,0:19:9.14:145,9,0	0/1:42,0:38:16.75:17,0,54	1/1:17,12:33:9.72:596,10,0	1/1:14,3:19:5.66:300,6,0	0/0:19,11:37:3.88:0,4,9	1/1:27,0:26:11.47:383,11,0	0/1:13,0:13:84.71:89,0,85	1/1:12,0:12:15.05:367,15,0	1/1:5,0:6:3.01:130,3,0
chr10	109819443	.	C	CCG	867.05	PASS	AB=0.883;AC=36;AF=0.643;AN=56;BaseQRankSum=-0.288;DP=217;FS=49.573;HRun=0;HaplotypeScore=36.2091;InbreedingCoeff=0.4211;MQ=81.11;MQ0=1;MQRankSum=-1.194;QD=6.28;ReadPosRankSum=2.684;VQSLOD=1.1568;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:14:2.71:41,3,0	0/0:6,0:6:11.98:0,12,100	0/0:15,0:11:22.82:0,23,209	0/0:10,1:9:11.51:0,12,111	1/1:4,3:8:2.93:51,3,0	1/1:8,0:8:2.84:14,3,0	0/1:2,12:16:4.05:131,0,4	0/1:7,0:7:5.43:55,0,5	1/1:1,4:5:6.01:96,6,0	0/0:11,0:11:24.02:0,24,221	0/0:9,0:9:17.84:0,18,159	1/1:6,0:6:8.84:70,9,0	1/1:8,0:8:6:53,6,0	1/1:10,0:10:6.86:58,7,0	1/1:0,5:6:3.01:48,3,0	0/0:14,0:14:40.22:0,40,382	0/1:6,0:5:2.30:46,0,2	1/1:4,0:4:5.80:39,6,0	0/1:6,0:6:0.01:10,0,0	1/1:6,0:6:3:31,3,0	1/1:6,0:6:9.98:64,10,0	1/1:1,3:4:0.89:44,1,0	0/0:3,0:3:0:0,0,0	0/0:1,7:9:2.82:0,3,22	1/1:4,0:4:6.02:77,6,0	1/1:4,0:4:5.23:43,5,0	1/1:2,6:9:2.48:47,2,0	1/1:1,0:1:2.80:13,3,0
chr10	109819444	.	C	CG	364.12	PASS	AB=0.856;AC=34;AF=0.607;AN=56;BaseQRankSum=0.982;DP=213;FS=48.188;HRun=0;HaplotypeScore=30.7562;InbreedingCoeff=0.2827;MQ=84.33;MQ0=1;MQRankSum=-0.510;QD=2.72;ReadPosRankSum=2.375;VQSLOD=0.7257;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,9:14:3.37:17,3,0	0/0:5,0:5:11.98:0,12,100	0/0:15,0:11:23.16:0,23,191	0/0:13,0:10:11.52:0,12,111	1/1:6,0:7:2.75:31,3,0	1/1:0,8:8:3.01:38,3,0	0/1:17,0:17:7.49:44,0,7	0/1:1,5:6:5.42:54,0,5	1/1:4,0:4:5.78:32,6,0	0/0:11,0:11:24.02:0,24,221	0/0:9,0:9:17.87:0,18,156	0/1:6,0:6:9.05:18,0,9	1/1:1,0:8:5.16:33,5,0	0/1:3,6:10:10.45:30,0,10	1/1:7,0:7:2.70:16,3,0	0/0:14,0:14:40.24:0,40,371	0/1:6,0:5:20.21:20,0,22	1/1:4,0:4:5.54:25,6,0	0/1:6,0:6:0.23:10,0,0	1/1:6,0:6:2.79:13,3,0	1/1:5,0:5:9.62:63,10,0	1/1:2,0:2:0.88:26,1,0	0/0:0,3:3:0:0,0,0	0/0:9,0:9:2.99:0,3,23	1/1:4,0:4:3.27:13,3,0	1/1:4,0:4:4.26:13,4,0	1/1:9,0:9:2.56:15,3,0	1/1:1,0:1:2.80:13,3,0
chr10	109821239	.	C	CTG	1938.89	PASS	AB=0.813;AC=38;AF=0.731;AN=52;BaseQRankSum=3.554;DP=715;FS=5.008;HRun=0;HaplotypeScore=152.7850;InbreedingCoeff=0.2768;MQ=51.59;MQ0=6;MQRankSum=-3.232;QD=3.43;ReadPosRankSum=-2.071;VQSLOD=2.2299;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:28:5.98:47,6,0	0/0:9,0:10:14.85:0,15,135	./.	./.	0/1:14,5:19:32.91:33,0,86	0/1:18,4:22:62.46:80,0,62	0/1:31,8:38:73.37:166,0,73	1/1:24,0:24:13.12:132,13,0	0/1:16,13:29:44.75:204,0,45	0/0:23,0:26:21.58:0,22,149	0/0:13,0:13:12.03:0,12,132	1/1:26,0:25:2.95:26,3,0	1/1:27,0:26:13.21:123,13,0	1/1:25,0:24:8.52:71,9,0	1/1:37,0:34:2.92:40,3,0	0/0:27,0:27:33.31:0,33,325	1/1:18,0:18:3.01:39,3,0	1/1:23,0:23:11.94:93,12,0	1/1:20,0:18:17.97:149,18,0	0/1:23,0:21:0:0,0,0	1/1:57,0:56:5.97:50,6,0	1/1:11,0:21:2.94:26,3,0	1/1:18,0:16:5.96:44,6,0	1/1:25,0:24:3:28,3,0	0/1:16,10:26:5.85:313,0,6	1/1:26,0:25:34.35:300,34,0	1/1:22,0:21:11.89:109,12,0	1/1:8,0:6:2.99:23,3,0
chr10	109821469	.	TA	T	6708.87	PASS	AB=0.924;AC=46;AF=0.821;AN=56;BaseQRankSum=10.853;DP=602;FS=43.781;HRun=1;HaplotypeScore=288.8874;InbreedingCoeff=0.2660;MQ=61.97;MQ0=0;MQRankSum=-5.974;QD=11.63;ReadPosRankSum=10.604;VQSLOD=1.4251;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:39:82.63:600,83,0	0/1:7,0:7:3.31:91,0,3	0/0:12,0:12:16.11:0,16,138	0/0:13,0:13:8.54:0,9,112	1/1:31,0:31:12.68:84,13,0	0/1:17,0:17:7.23:193,0,7	1/1:30,0:30:37.10:408,37,0	1/1:31,0:31:63.11:360,63,0	1/1:29,0:28:12.16:315,12,0	1/1:2,26:28:59.31:358,59,0	0/1:3,15:18:22.10:37,0,22	1/1:24,0:24:44.70:351,45,0	1/1:21,0:21:30.83:283,31,0	1/1:20,0:20:13.98:287,14,0	1/1:22,0:22:62.64:363,63,0	1/1:26,0:26:33.83:367,34,0	1/1:14,0:14:20.44:164,20,0	1/1:14,0:14:9:131,9,0	1/1:7,0:7:19.93:117,20,0	0/1:25,0:25:53.77:54,0,55	0/1:19,0:19:4.39:147,0,4	1/1:21,0:21:31.62:276,32,0	1/1:24,0:24:13.17:294,13,0	1/1:21,0:21:20.60:215,21,0	1/1:19,0:19:9.37:221,9,0	1/1:32,0:32:84.62:478,85,0	1/1:28,0:28:54.41:426,54,0	0/1:10,0:10:13:91,0,13
chr10	109822352	.	G	GA	1300.07	PASS	AB=0.887;AC=18;AF=0.333;AN=54;BaseQRankSum=1.811;DP=504;FS=6.682;HRun=11;HaplotypeScore=70.5826;InbreedingCoeff=-0.3052;MQ=40.05;MQ0=15;MQRankSum=-4.090;QD=3.94;ReadPosRankSum=-2.790;VQSLOD=0.0715;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,5:15:56.99:113,0,57	0/1:15,0:16:2.22:2,0,118	0/0:13,0:1:2.37:0,2,8	./.	0/0:27,0:25:9.65:0,10,280	0/0:22,0:23:54.32:0,54,382	0/0:18,0:16:36.62:0,37,276	0/1:27,16:42:99:351,0,210	0/0:10,0:10:22.54:0,23,151	0/0:21,0:17:31.82:0,32,237	0/0:13,0:11:23.82:0,24,175	0/1:12,0:12:27.84:28,0,114	0/1:15,3:16:84.89:133,0,85	0/1:13,0:12:15.76:16,0,32	0/1:12,4:16:23.22:23,0,130	0/0:15,0:16:10.23:0,10,114	0/1:22,5:26:92.95:93,0,159	0/1:13,1:13:30.55:64,0,31	0/1:36,5:41:99:188,0,250	0/1:14,4:15:1.59:149,0,2	0/0:5,0:3:2.93:0,3,23	0/1:9,0:10:4.61:5,0,50	1/1:10,0:11:7.50:47,8,0	0/1:9,3:11:32.03:32,0,54	0/0:18,0:16:26.69:0,27,204	0/1:18,0:18:84.20:84,0,122	0/1:22,3:23:83.92:84,0,202	0/1:14,0:14:40.26:40,0,49
chr10	109824042	.	TA	T	1053.44	PASS	AB=0.648;AC=35;AF=0.625;AN=56;BaseQRankSum=0.645;DP=254;FS=8.099;HRun=16;HaplotypeScore=35.0096;InbreedingCoeff=0.0503;MQ=68.73;MQ0=10;MQRankSum=0.480;QD=5.69;ReadPosRankSum=2.904;VQSLOD=1.5895;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:5,9:14:42.87:111,0,43	0/0:5,0:5:8.99:0,9,76	0/0:32,0:10:8.47:0,8,96	0/0:18,0:8:7.60:0,8,55	1/1:1,0:12:20.32:59,20,0	1/1:1,0:5:8.08:23,8,0	1/1:0,1:6:13.13:47,13,0	0/1:8,8:16:40.11:80,0,40	1/1:2,5:7:13.96:88,14,0	0/0:9,0:9:17.82:0,18,140	0/1:5,1:6:4.78:5,0,62	0/1:2,5:7:10.43:57,0,10	1/1:0,1:1:2.94:18,3,0	1/1:1,4:5:8.80:54,9,0	0/1:3,4:7:28.51:39,0,29	0/0:5,0:5:8.87:0,9,65	0/1:4,12:16:7.21:129,0,7	0/1:4,5:10:27.61:73,0,28	0/1:4,4:8:11.43:46,0,11	1/1:0,2:2:5.84:34,6,0	0/1:5,6:11:10.50:57,0,11	1/1:3,3:6:5.79:36,6,0	1/1:3,1:4:1.99:6,2,0	1/1:1,1:2:2.93:18,3,0	1/1:1,0:11:18.32:53,18,0	0/1:6,3:9:13.47:42,0,13	1/1:1,3:4:5.88:36,6,0	0/1:3,8:11:20.90:114,0,21
chr10	109828386	.	T	TAATA	540.25	PASS	AC=14;AF=0.538;AN=26;BaseQRankSum=-1.992;DP=185;FS=2.029;HRun=0;HaplotypeScore=25.9155;InbreedingCoeff=0.4132;MQ=25.91;MQ0=59;MQRankSum=-0.996;QD=5.40;ReadPosRankSum=-0.543;VQSLOD=0.8649;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,2:9:5.98:90,6,0	0/0:1,0:1:3.01:0,3,46	./.	./.	./.	0/0:9,0:9:3.01:0,3,32	./.	1/1:39,0:21:3.01:51,3,0	0/0:3,0:3:6.02:0,6,64	0/0:6,0:5:3.01:0,3,46	0/0:1,0:1:3.01:0,3,46	./.	0/0:3,0:3:3:0,3,28	./.	./.	./.	1/1:12,3:7:12.04:279,12,0	1/1:13,2:9:3.01:70,3,0	1/1:8,0:6:3.01:43,3,0	./.	./.	./.	./.	./.	./.	1/1:4,1:3:3.01:70,3,0	./.	1/1:3,1:3:3.01:43,3,0
chr10	109828436	.	TAA	T	2063.14	PASS	AB=0.722;AC=39;AF=0.722;AN=54;BaseQRankSum=2.227;DP=220;FS=0.000;HRun=15;HaplotypeScore=35.7266;InbreedingCoeff=0.6414;MQ=52.18;MQ0=14;MQRankSum=-2.047;QD=11.09;ReadPosRankSum=1.409;VQSLOD=1.2489;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:12:26.97:237,27,0	0/0:3,0:4:9.02:0,9,110	0/0:5,0:1:2.90:0,3,16	0/0:4,0:4:2.66:0,3,20	1/1:0,0:5:10.96:47,11,0	1/1:3,0:11:19.10:83,19,0	1/1:0,0:5:13.72:59,14,0	1/1:11,21:24:32.71:290,33,0	1/1:2,0:5:7.94:31,8,0	0/0:7,0:6:15.04:0,15,190	0/0:8,0:7:21.06:0,21,270	1/1:0,0:5:10.98:47,11,0	1/1:0,0:7:14.46:59,14,0	1/1:0,0:5:10.98:47,11,0	1/1:0,0:4:10.98:47,11,0	0/0:3,0:2:3.01:0,3,35	1/1:5,9:13:20.95:185,21,0	1/1:4,9:10:20.93:185,21,0	1/1:5,7:11:20.62:170,21,0	1/1:2,4:6:5.95:53,6,0	1/1:1,1:2:2.99:26,3,0	./.	0/0:2,0:2:0:0,0,0	1/1:0,0:5:10.98:47,11,0	1/1:1,0:10:20.96:86,21,0	1/1:1,11:12:32.98:291,33,0	1/1:0,4:4:12:106,12,0	0/1:8,5:8:22.94:132,0,23
chr10	109829465	.	TACACACACACAC	T	2722.91	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.689;DP=546;FS=3.662;HRun=0;HaplotypeScore=175.5982;InbreedingCoeff=0.7871;MQ=63.14;MQ0=13;MQRankSum=-7.054;QD=25.69;ReadPosRankSum=2.107;VQSLOD=3.0774;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:30:18.03:0,18,553	0/0:4,0:4:9.03:0,9,359	0/0:30,0:17:3.01:0,3,34	0/0:28,0:18:3.01:0,3,55	1/1:16,13:29:26.94:680,27,0	1/1:8,15:23:36.12:1244,36,0	1/1:14,2:17:9.03:291,9,0	0/0:19,0:16:8.06:0,8,245	1/1:7,12:19:11.59:247,12,0	0/0:20,0:20:36.11:0,36,1544	0/0:9,0:9:12.51:0,13,474	0/0:16,0:16:18.23:0,18,966	0/0:12,0:16:15.03:0,15,503	0/0:18,0:18:20.41:0,20,817	0/0:21,0:25:11.75:0,12,419	0/0:14,0:16:12.04:0,12,593	0/0:12,0:17:15.05:0,15,732	0/0:13,0:13:14.84:0,15,532	0/0:13,0:14:22.65:0,23,811	0/0:21,0:21:27.01:0,27,1289	0/0:25,0:22:27.09:0,27,1370	0/0:17,0:17:5.98:0,6,190	0/0:14,0:18:9.89:0,10,247	0/0:18,0:20:9.97:0,10,507	1/1:9,8:18:12.90:424,13,0	0/0:36,0:35:54.12:0,54,2324	0/0:18,0:17:27.56:0,28,1202	0/0:7,0:6:9.50:0,10,352
chr10	109829613	.	GA	G	1615.48	PASS	AB=0.827;AC=17;AF=0.304;AN=56;BaseQRankSum=7.840;DP=511;FS=0.000;HRun=11;HaplotypeScore=53.2455;InbreedingCoeff=0.5539;MQ=59.66;MQ0=4;MQRankSum=-1.345;QD=8.78;ReadPosRankSum=3.339;VQSLOD=1.9287;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:36:99:0,102,1058	0/0:4,0:4:12.03:0,12,128	0/0:9,0:6:17.63:0,18,153	0/0:12,0:12:27.68:0,28,270	0/0:23,1:25:8.58:0,9,465	0/0:16,2:18:4.88:0,5,454	0/0:18,1:18:14.45:0,14,359	0/1:15,2:17:5.32:5,0,276	0/0:16,0:16:39.09:0,39,408	0/0:30,1:31:44.53:0,45,679	0/0:15,0:15:33.06:0,33,339	1/1:4,7:12:3.31:109,3,0	1/1:0,14:14:35.96:295,36,0	1/1:3,17:20:47.91:391,48,0	1/1:0,11:11:26.97:222,27,0	0/1:19,2:20:4.18:4,0,370	0/0:24,0:24:54.14:0,54,575	0/0:26,1:27:53.47:0,53,736	0/1:24,5:29:26.44:26,0,545	0/0:17,1:19:16.60:0,17,401	0/1:13,1:14:9.76:10,0,283	0/1:1,7:8:6.92:127,0,7	1/1:4,9:13:26.94:218,27,0	1/1:3,21:24:47.94:394,48,0	0/0:14,1:15:5.42:0,5,240	0/0:25,1:29:44.03:0,44,601	0/0:12,0:12:33.08:0,33,352	0/0:15,0:15:44.95:0,45,461
chr10	109830785	.	T	TACACACACAC	6216.96	PASS	AB=0.946;AC=27;AF=0.519;AN=52;BaseQRankSum=-2.271;DP=634;FS=1.701;HRun=0;HaplotypeScore=233.3483;InbreedingCoeff=0.6740;MQ=61.16;MQ0=8;MQRankSum=-4.981;QD=16.99;ReadPosRankSum=-3.246;VQSLOD=3.6045;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:26:8.93:127,9,0	0/0:10,0:11:17.40:0,17,368	./.	./.	0/1:12,7:19:0:0,0,0	1/1:24,0:23:13.21:314,13,0	1/1:26,0:26:14.88:188,15,0	1/1:23,0:23:31.54:546,32,0	1/1:23,4:27:11.30:476,11,0	0/0:27,0:28:32.88:0,33,659	0/0:20,0:20:21.11:0,21,497	0/0:21,0:21:35.89:0,36,643	0/0:17,0:16:7.14:0,7,376	0/0:18,0:18:27.09:0,27,588	0/0:26,0:25:17.11:0,17,283	0/0:28,0:32:51.05:0,51,1211	0/1:18,0:17:10.54:501,0,11	1/1:10,0:9:13.21:242,13,0	1/1:25,0:23:22.31:492,22,0	1/1:23,0:23:12.01:168,12,0	0/1:30,0:28:0:0,0,0	0/1:19,0:19:11.06:11,0,260	0/0:20,0:20:28.59:0,29,446	0/0:37,0:37:26.80:0,27,806	1/1:16,0:26:10.63:357,11,0	0/1:32,0:31:23.20:1683,0,23	1/1:29,0:28:44.36:845,44,0	1/1:7,0:7:12:267,12,0
chr10	109830819	.	CAT	C	4784.07	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=4.993;DP=779;FS=4.537;HRun=0;HaplotypeScore=141.2594;InbreedingCoeff=0.8542;MQ=51.11;MQ0=17;MQRankSum=5.333;QD=18.05;ReadPosRankSum=2.503;VQSLOD=5.1415;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:31.40:0,31,267	0/0:12,0:12:19.93:0,20,309	0/0:45,0:28:74.16:0,74,744	0/0:30,1:17:50.89:0,51,454	0/0:20,0:20:38.88:0,39,308	0/0:23,0:21:41.41:0,41,362	0/0:30,0:29:35.29:0,35,474	0/0:45,0:41:63.18:0,63,709	0/0:31,1:32:50.77:0,51,455	0/0:36,0:36:90.57:0,91,1049	0/0:29,0:29:68.91:0,69,808	1/1:18,12:30:70.01:822,70,0	1/1:17,8:24:65.95:708,66,0	1/1:20,8:28:46.07:655,46,0	1/1:20,6:25:36.98:548,37,0	0/0:30,0:30:34.58:0,35,946	0/0:21,0:20:12.79:0,13,225	0/0:12,0:10:13.88:0,14,170	0/0:25,0:23:56.06:0,56,535	0/0:27,0:26:30.36:0,30,280	0/0:28,0:27:20.85:0,21,155	1/1:20,6:25:71.93:723,72,0	1/1:17,9:26:47.61:701,48,0	1/1:4,37:41:23.40:617,23,0	0/0:34,0:34:46.77:0,47,531	0/1:36,0:35:8.43:8,0,897	0/1:27,0:27:2.71:3,0,350	0/0:10,0:10:25.28:0,25,203
chr10	109830927	.	TACACACACAC	T	6573.15	PASS	AB=0.701;AC=21;AF=0.404;AN=52;BaseQRankSum=9.751;DP=790;FS=2.058;HRun=0;HaplotypeScore=233.3255;InbreedingCoeff=0.7462;MQ=50.38;MQ0=21;MQRankSum=-10.305;QD=18.89;ReadPosRankSum=-1.321;VQSLOD=4.0417;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:52.73:0,53,2184	0/0:8,0:9:9.03:0,9,391	./.	./.	0/1:9,0:21:17.54:83,0,18	1/1:11,0:13:4.44:138,4,0	1/1:18,0:40:5.37:129,5,0	0/0:37,0:34:35.60:0,36,870	0/1:13,0:34:0.33:432,0,0	0/0:40,0:39:78.27:0,78,3000	0/0:20,0:21:21.07:0,21,882	1/1:10,16:26:23.65:672,24,0	1/1:12,20:32:45.08:1252,45,0	1/1:12,15:28:9.99:287,10,0	1/1:16,18:34:42.14:1218,42,0	0/0:24,0:24:33.10:0,33,1318	0/0:24,0:24:42.13:0,42,1717	0/0:25,0:24:48.14:0,48,1923	0/0:16,0:15:27.44:0,27,600	0/0:16,0:17:27.56:0,28,1164	0/0:60,0:63:99:0,106,3832	1/1:13,12:24:30.20:944,30,0	1/1:14,16:30:30.39:825,30,0	1/1:27,6:33:21.01:377,21,0	0/1:24,0:29:13.74:216,0,14	0/0:32,0:32:63.01:0,63,1796	0/0:30,0:31:69.22:0,69,2830	0/0:12,0:11:27.09:0,27,1025
chr10	109831295	.	CTGTG	C	3119.34	PASS	AB=0.767;AC=30;AF=0.577;AN=52;BaseQRankSum=1.411;DP=704;FS=2.531;HRun=0;HaplotypeScore=151.4321;InbreedingCoeff=-0.0438;MQ=66.28;MQ0=18;MQRankSum=-1.427;QD=5.71;ReadPosRankSum=-0.049;VQSLOD=2.7706;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,15:42:2.10:218,2,0	0/0:10,0:10:8.62:0,9,151	./.	./.	0/1:16,3:17:42.54:43,0,170	0/0:22,0:28:32.82:0,33,584	0/1:28,2:35:45.79:46,0,751	0/0:30,0:28:0:0,0,0	0/1:18,0:26:34.93:35,0,507	0/0:18,0:18:17.80:0,18,364	0/0:18,0:17:17.65:0,18,351	0/1:17,11:28:67.36:73,0,67	0/1:10,4:25:3.27:278,0,3	0/1:17,2:27:32.72:33,0,35	0/1:13,7:26:45.84:263,0,46	0/1:15,1:17:19.62:20,0,520	1/1:17,12:30:35.92:541,36,0	1/1:16,11:28:32.09:494,32,0	1/1:14,0:15:9.02:103,9,0	1/1:13,1:14:3.01:47,3,0	1/1:40,13:53:21.07:327,21,0	0/1:10,2:23:26.97:27,0,65	0/1:17,1:18:21.95:95,0,22	0/1:15,3:24:19.42:123,0,19	0/1:20,1:22:25.93:26,0,293	1/1:27,3:32:15.03:177,15,0	1/1:9,7:16:11.70:178,12,0	1/1:9,3:10:9.03:140,9,0
chr10	109831694	.	G	GAA	4007.93	PASS	AB=0.807;AC=33;AF=0.589;AN=56;BaseQRankSum=-2.152;DP=539;FS=4.432;HRun=14;HaplotypeScore=81.5917;InbreedingCoeff=0.7197;MQ=70.92;MQ0=4;MQRankSum=-0.229;QD=11.20;ReadPosRankSum=-2.767;VQSLOD=2.1217;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:25:27.43:256,27,0	0/0:8,0:9:17.59:0,18,137	0/0:30,0:14:16.59:0,17,118	0/0:24,0:17:22.67:0,23,144	0/0:20,0:20:2.46:0,2,163	0/1:14,1:20:21.87:22,0,175	0/0:10,0:12:17.59:0,18,171	1/1:10,15:28:47.93:457,48,0	0/0:19,0:19:32.66:0,33,262	0/0:16,0:18:20.08:0,20,148	0/0:15,0:16:14.74:0,15,159	1/1:8,16:27:22.78:225,23,0	0/1:9,2:16:10.17:90,0,10	1/1:7,16:26:12.24:109,12,0	1/1:6,4:16:22.84:250,23,0	0/0:20,0:20:41.68:0,42,319	1/1:4,16:21:12.04:158,12,0	1/1:9,1:9:19.19:168,19,0	0/1:15,0:16:12.65:205,0,13	1/1:6,20:28:53.07:410,53,0	1/1:5,7:13:14.39:150,14,0	1/1:4,14:21:42.64:419,43,0	1/1:5,15:22:24.95:207,25,0	1/1:5,8:13:12.04:157,12,0	0/0:13,0:13:20.71:0,21,172	1/1:5,13:20:43.33:379,43,0	1/1:6,18:25:26.53:298,27,0	1/1:2,1:8:5.38:48,5,0
chr10	109835669	.	G	GAC	9900.17	PASS	AB=0.707;AC=29;AF=0.518;AN=56;BaseQRankSum=0.756;DP=613;FS=6.879;HRun=0;HaplotypeScore=140.9319;InbreedingCoeff=0.7838;MQ=63.93;MQ0=8;MQRankSum=-0.982;QD=30.00;ReadPosRankSum=2.562;VQSLOD=6.6218;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,26:33:63.22:1025,63,0	0/0:10,0:9:27.09:0,27,338	0/0:16,0:10:17.78:0,18,179	0/1:22,0:18:30.29:30,0,156	1/1:3,12:15:21.07:337,21,0	1/1:6,11:17:27.09:439,27,0	1/1:6,9:15:24.08:389,24,0	1/1:11,15:27:51.12:758,51,0	0/1:4,9:10:16.39:270,0,16	0/0:38,0:37:93.26:0,93,1133	0/0:20,0:20:36.11:0,36,450	0/0:25,0:26:53.92:0,54,616	0/0:30,0:30:69.22:0,69,862	0/0:25,0:24:60.19:0,60,750	0/0:35,0:34:93.26:0,93,1145	0/0:25,0:26:44.79:0,45,500	1/1:1,20:21:57.19:924,57,0	1/1:3,14:17:39.13:636,39,0	1/1:8,12:17:36.08:517,36,0	1/1:3,15:18:42.14:684,42,0	1/1:6,26:32:81.24:1258,81,0	0/0:9,0:9:23.97:0,24,300	0/0:22,0:21:48.15:0,48,598	0/0:25,0:25:57.08:0,57,666	1/1:2,13:15:27.09:436,27,0	0/1:8,28:37:30.48:1219,0,30	1/1:0,16:16:39.13:636,39,0	1/1:1,7:7:21.07:342,21,0
chr10	109835702	.	G	GAC	99.18	PASS	AB=1.000;AC=9;AF=0.180;AN=50;BaseQRankSum=0.991;DP=423;FS=4.805;HRun=0;HaplotypeScore=150.4394;InbreedingCoeff=0.4457;MQ=66.30;MQ0=13;MQRankSum=-0.778;QD=1.68;ReadPosRankSum=-2.286;VQSLOD=1.6278;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:19:12.84:13,0,344	0/0:8,0:7:11.93:0,12,128	0/0:20,0:13:14.39:0,14,112	0/0:27,0:18:10.03:0,10,211	1/1:6,3:9:3.01:48,3,0	1/1:3,1:4:3.01:49,3,0	./.	./.	1/1:4,2:6:6.02:98,6,0	0/0:23,0:21:39.10:0,39,473	0/0:15,0:13:18:0,18,193	0/0:13,0:12:27.05:0,27,321	0/0:22,0:22:33.10:0,33,410	0/0:19,0:18:30.01:0,30,354	0/0:31,0:29:51.07:0,51,587	0/0:27,0:23:27.09:0,27,338	0/1:14,0:14:1.59:2,0,308	0/0:12,0:12:27.09:0,27,338	0/1:6,0:6:13.96:14,0,74	0/0:10,0:10:23.99:0,24,267	0/0:31,1:29:30.06:0,30,375	0/0:10,0:10:20.96:0,21,263	0/0:18,0:17:12.01:0,12,135	0/0:21,0:21:30.08:0,30,358	./.	0/0:24,0:24:27.06:0,27,312	0/0:13,0:13:21.07:0,21,262	0/0:7,0:7:12.04:0,12,150
chr10	109835735	.	G	GAC	460.65	PASS	AB=0.862;AC=11;AF=0.204;AN=54;BaseQRankSum=-1.671;DP=436;FS=14.877;HRun=0;HaplotypeScore=100.2768;InbreedingCoeff=0.0852;MQ=51.41;MQ0=64;MQRankSum=1.244;QD=3.97;ReadPosRankSum=-1.240;VQSLOD=1.4454;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:16:36.11:0,36,450	0/0:7,0:6:9.23:0,9,113	0/0:24,0:9:11.87:0,12,127	0/1:29,0:13:27.79:28,0,30	1/1:1,2:2:6.02:97,6,0	0/1:1,4:6:22.48:183,0,22	./.	0/0:36,0:16:45.14:0,45,562	0/1:1,3:5:28.61:90,0,29	0/0:16,0:13:32.93:0,33,375	0/0:13,0:12:15.05:0,15,187	0/0:16,0:15:24.07:0,24,296	0/1:19,0:19:12.09:12,0,342	0/1:17,0:15:22.28:22,0,235	0/0:17,0:14:27.08:0,27,331	0/0:27,0:22:42.13:0,42,524	0/0:16,0:15:33.10:0,33,411	0/0:7,0:6:3.01:0,3,37	0/0:14,0:4:12.04:0,12,150	0/0:10,0:9:12.04:0,12,150	0/0:42,0:38:75.02:0,75,894	0/1:8,0:8:31.72:32,0,129	0/0:13,0:11:24.06:0,24,283	0/1:24,1:25:44.25:44,0,473	1/1:0,2:2:6.02:99,6,0	0/0:14,0:10:12.04:0,12,150	0/0:14,0:14:15.05:0,15,187	0/0:8,0:6:6.02:0,6,75
chr10	109835768	.	G	GAC	5478.19	PASS	AB=0.545;AC=12;AF=0.214;AN=56;BaseQRankSum=2.467;DP=696;FS=14.100;HRun=0;HaplotypeScore=122.9636;InbreedingCoeff=0.7496;MQ=52.08;MQ0=54;MQRankSum=2.927;QD=34.03;ReadPosRankSum=1.977;VQSLOD=6.5861;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:35:78.25:0,78,960	0/0:10,0:10:23.39:0,23,294	0/0:45,0:17:19.19:0,19,371	0/0:66,0:28:57.83:0,58,542	0/0:7,0:6:18.06:0,18,222	0/0:10,1:11:27.08:0,27,332	0/0:11,0:6:15.05:0,15,184	0/0:55,0:45:96.28:0,96,1161	0/0:9,0:9:20.96:0,21,258	0/0:24,0:22:60.18:0,60,726	0/0:9,0:8:18.05:0,18,209	1/1:4,14:16:8.26:635,8,0	1/1:1,26:27:32.29:1038,32,0	1/1:2,22:24:54.07:879,54,0	1/1:3,21:22:54.18:875,54,0	0/0:27,0:21:48.15:0,48,591	0/0:26,0:26:60.02:0,60,715	0/0:12,0:10:30.09:0,30,369	0/0:28,0:23:66.16:0,66,776	0/0:16,0:15:33.10:0,33,399	0/0:72,0:64:99:0,153,1857	0/1:3,11:14:3.83:456,0,4	1/1:2,14:16:2.19:549,2,0	0/1:4,32:35:32.56:1046,0,33	0/0:5,0:5:15.05:0,15,185	0/0:29,0:27:75.24:0,75,923	0/0:18,0:17:26.89:0,27,332	0/0:10,0:6:18.06:0,18,221
chr10	109835835	.	T	TGA	1377.64	PASS	AB=0.955;AC=22;AF=0.423;AN=52;BaseQRankSum=-1.791;DP=406;FS=2.038;HRun=0;HaplotypeScore=66.0325;InbreedingCoeff=-0.1858;MQ=54.82;MQ0=59;MQRankSum=2.246;QD=5.20;ReadPosRankSum=-6.307;VQSLOD=0.4986;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:20,3:16:20.86:72,0,21	0/0:11,0:10:23.84:0,24,304	0/0:51,0:20:32.66:0,33,548	0/1:42,0:18:3.37:3,0,409	0/1:4,0:4:4.72:41,0,5	1/1:4,0:4:5.98:50,6,0	./.	./.	0/1:4,0:4:3.55:41,0,4	0/0:25,0:23:65.98:0,66,979	0/0:7,0:6:5.81:0,6,59	0/1:14,0:5:0.55:63,0,1	0/1:12,0:9:21.08:72,0,21	0/0:17,0:12:8.52:0,9,96	0/1:20,0:12:32.67:33,0,39	0/0:23,0:17:20.84:0,21,198	0/1:9,2:10:10.26:161,0,10	0/1:4,2:6:10.52:125,0,11	0/1:4,0:3:16.90:28,0,17	0/1:7,0:6:33.22:33,0,46	0/1:38,5:27:41.53:235,0,42	0/1:4,0:4:7.33:11,0,7	0/1:7,0:6:3.76:41,0,4	0/1:18,0:16:34.79:85,0,35	1/1:3,0:3:2.69:18,3,0	0/1:14,2:13:51.94:231,0,52	1/1:3,14:13:10.04:185,10,0	0/0:1,1:1:2.84:0,3,14
chr10	109835999	.	GAC	G	93.12	PASS	AB=0.941;AC=8;AF=0.333;AN=24;BaseQRankSum=0.687;DP=265;FS=0.000;HRun=0;HaplotypeScore=51.5666;InbreedingCoeff=-0.0027;MQ=49.19;MQ0=40;MQRankSum=-1.630;QD=0.93;ReadPosRankSum=0.412;VQSLOD=1.1764;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:27,0:12:27.06:0,27,392	0/1:21,0:4:21.22:21,0,44	./.	./.	./.	./.	./.	0/1:14,1:13:16.77:17,0,255	0/0:7,0:6:12.04:0,12,199	1/1:6,1:6:6.01:60,6,0	0/0:4,9:12:0:0,0,1	1/1:6,3:9:2.88:37,3,0	./.	0/1:15,0:14:14.30:14,0,184	./.	0/0:10,2:9:2.97:0,3,20	./.	./.	0/1:26,7:27:15:39,0,15	0/0:2,2:4:0:0,0,0	0/0:4,1:5:3:0,3,25	./.	./.	./.	./.	./.
chr10	109836256	.	GAC	G	114.20	PASS	AB=0.906;AC=4;AF=0.083;AN=48;BaseQRankSum=1.949;DP=580;FS=7.875;HRun=0;HaplotypeScore=89.6074;InbreedingCoeff=-0.1178;MQ=59.72;MQ0=107;MQRankSum=2.061;QD=1.34;ReadPosRankSum=-3.497;VQSLOD=-0.3170;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,2:18:31.21:31,0,551	0/0:10,0:9:18.06:0,18,301	0/0:33,0:18:6.21:0,6,103	0/0:38,0:15:5.44:0,5,213	./.	./.	./.	0/0:29,0:14:18.02:0,18,232	0/0:0,0:1:3:0,3,27	0/0:41,0:29:37.34:0,37,1095	0/0:15,0:10:24.06:0,24,375	0/0:31,0:23:54.18:0,54,848	0/0:26,0:19:50.17:0,50,769	0/0:25,0:19:36.12:0,36,581	0/0:24,0:19:39.01:0,39,619	0/0:32,1:28:24.97:0,25,926	0/0:16,0:9:24.08:0,24,389	0/0:11,0:8:24.08:0,24,388	0/0:8,0:4:6.02:0,6,100	0/1:13,7:16:99:161,0,220	0/0:68,3:48:66.76:0,67,1548	0/0:27,1:15:33.09:0,33,501	0/0:24,0:15:36.12:0,36,556	0/1:18,1:15:11.06:11,0,374	./.	0/1:18,0:10:13.57:14,0,295	0/0:20,0:9:33.11:0,33,533	0/0:4,0:3:6.02:0,6,100
chr10	109836355	.	G	GAC	364.81	PASS	AB=0.751;AC=4;AF=0.077;AN=52;BaseQRankSum=4.329;DP=831;FS=16.909;HRun=0;HaplotypeScore=78.9430;InbreedingCoeff=-0.0917;MQ=33.32;MQ0=166;MQRankSum=-4.109;QD=7.15;ReadPosRankSum=1.470;VQSLOD=1.5796;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:38:47.98:0,48,577	0/0:20,0:9:10.27:0,10,115	./.	./.	0/1:8,7:13:57.25:167,0,57	0/1:6,2:7:61:87,0,61	0/1:11,6:9:82.87:84,0,83	0/0:53,0:4:12.04:0,12,150	0/1:7,3:9:58.41:135,0,58	0/0:31,0:17:45.12:0,45,546	0/0:23,0:16:24.08:0,24,300	0/0:37,0:24:40.37:0,40,491	0/0:31,0:20:33.05:0,33,373	0/0:32,0:21:36.08:0,36,450	0/0:38,0:23:30.10:0,30,375	0/0:22,0:20:30.10:0,30,375	0/0:31,0:20:27.08:0,27,337	0/0:16,0:11:21.03:0,21,263	0/0:26,0:7:18.06:0,18,225	0/0:31,0:9:15.03:0,15,175	0/0:103,0:57:86.81:0,87,1075	0/0:38,0:14:30.09:0,30,375	0/0:28,0:13:17.89:0,18,201	0/0:39,0:25:30.08:0,30,361	0/0:7,0:6:15.05:0,15,188	0/0:35,0:19:51.16:0,51,638	0/0:22,0:17:30.10:0,30,375	0/0:11,0:3:9.03:0,9,113
chr10	109836531	.	A	AACAC	3661.46	PASS	AC=34;AF=0.630;AN=54;BaseQRankSum=-2.464;DP=600;FS=11.986;HRun=0;HaplotypeScore=132.8137;InbreedingCoeff=0.7490;MQ=54.60;MQ0=13;MQRankSum=0.652;QD=8.97;ReadPosRankSum=-3.364;VQSLOD=1.5956;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:40:12.04:221,12,0	0/0:11,0:11:12.04:0,12,185	./.	0/0:25,0:19:0:0,0,0	0/0:12,0:18:2.60:0,3,10	0/0:8,0:16:12.01:0,12,112	0/0:14,0:15:8.83:0,9,64	1/1:20,0:20:3.01:37,3,0	0/0:9,0:16:9.01:0,9,84	0/0:22,0:22:15.41:0,15,228	0/0:14,0:13:14.93:0,15,136	1/1:9,10:23:15.05:351,15,0	1/1:14,0:14:6.02:124,6,0	1/1:23,1:24:15.03:275,15,0	1/1:17,8:31:9.03:211,9,0	0/0:16,0:18:12.03:0,12,165	1/1:20,0:20:9.03:136,9,0	1/1:17,0:22:16.30:281,16,0	1/1:19,0:17:6.89:81,7,0	1/1:24,0:23:6.02:67,6,0	1/1:34,0:32:5.81:301,6,0	1/1:22,0:21:15.01:222,15,0	1/1:12,8:20:8.51:153,9,0	1/1:20,12:37:14.70:240,15,0	0/0:5,0:12:14.92:0,15,127	1/1:30,0:27:40.23:547,40,0	1/1:20,0:19:27.05:362,27,0	1/1:2,0:5:3.01:52,3,0
chr10	109836539	.	C	CACAC	3093.78	PASS	AB=1.000;AC=33;AF=0.611;AN=54;BaseQRankSum=-4.207;DP=615;FS=19.062;HRun=0;HaplotypeScore=127.1807;InbreedingCoeff=0.7287;MQ=53.13;MQ0=16;MQRankSum=1.007;QD=7.19;ReadPosRankSum=-0.896;VQSLOD=1.5632;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:45,0:44:15.94:257,16,0	0/0:13,0:12:12.04:0,12,185	./.	0/0:25,0:17:0:0,0,0	0/0:17,0:17:2.60:0,3,10	0/0:15,0:15:11.92:0,12,112	0/0:13,0:12:8.83:0,9,64	1/1:22,0:22:2.13:5,2,0	0/0:14,0:14:9.01:0,9,84	0/0:23,0:23:14.50:0,15,227	0/0:14,0:13:14.93:0,15,136	1/1:26,0:26:15.05:351,15,0	1/1:8,9:18:2.81:69,3,0	1/1:23,0:23:15.03:246,15,0	1/1:29,0:29:9.03:211,9,0	0/0:18,0:18:12.03:0,12,165	1/1:21,0:21:6.49:103,6,0	1/1:27,0:26:15.52:280,16,0	1/1:16,0:14:6.47:80,6,0	0/1:29,0:28:0:1,0,0	1/1:34,0:32:5.81:301,6,0	1/1:22,0:21:15.01:223,15,0	1/1:22,0:20:8.51:153,9,0	1/1:38,0:38:17.71:309,18,0	0/0:13,0:12:14.92:0,15,127	1/1:33,0:29:19.88:322,20,0	1/1:20,0:19:25.59:315,26,0	1/1:5,0:5:3.01:52,3,0
chr10	109837075	.	A	AAAG	2265.62	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-6.187;DP=404;FS=15.463;HRun=0;HaplotypeScore=54.1121;InbreedingCoeff=0.9268;MQ=66.46;MQ0=2;MQRankSum=-0.557;QD=34.33;ReadPosRankSum=2.868;VQSLOD=2.5958;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.19:0,63,848	0/0:6,0:6:15.05:0,15,210	0/0:17,0:10:17.89:0,18,249	0/0:13,0:6:7.39:0,7,77	0/0:20,0:20:57.18:0,57,782	0/0:17,0:17:42.12:0,42,556	0/0:9,0:9:21.07:0,21,294	0/0:36,0:36:59.68:0,60,808	0/0:11,0:11:9.02:0,9,105	0/0:10,0:10:27.09:0,27,378	0/0:14,0:14:30.07:0,30,373	1/1:2,10:12:21.07:417,21,0	1/1:4,6:10:18.06:359,18,0	1/1:3,8:11:21.07:419,21,0	1/1:5,6:11:24.08:464,24,0	0/0:12,0:12:24.07:0,24,306	0/0:28,0:29:66.09:0,66,825	0/0:15,0:15:33.10:0,33,446	0/0:22,0:22:48.07:0,48,600	0/0:10,0:10:21.05:0,21,260	0/0:14,0:14:30.08:0,30,389	1/1:2,1:3:3.01:60,3,0	1/1:6,1:7:12.03:201,12,0	1/1:5,7:12:30.08:535,30,0	0/0:15,0:15:33.11:0,33,462	0/0:17,0:17:33.10:0,33,445	0/0:14,0:14:39.13:0,39,545	0/0:15,0:15:39.10:0,39,524
chr10	109837201	.	TTAAA	T	771.33	PASS	AB=0.987;AC=21;AF=0.404;AN=52;BaseQRankSum=-3.130;DP=278;FS=0.883;HRun=0;HaplotypeScore=56.0902;InbreedingCoeff=0.2563;MQ=66.71;MQ0=1;MQRankSum=0.973;QD=4.59;ReadPosRankSum=2.614;VQSLOD=0.7907;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:1.43:42,1,0	1/1:4,3:7:6.02:93,6,0	./.	./.	0/0:10,0:10:6:0,6,62	0/0:14,0:14:15.03:0,15,182	0/0:9,0:9:6.02:0,6,108	1/1:34,7:41:17.97:197,18,0	0/0:9,0:9:9.03:0,9,148	0/0:8,0:8:9.03:0,9,197	0/1:13,1:14:25.43:25,0,360	0/1:3,0:3:11.06:11,0,13	0/0:5,0:5:2.04:0,2,6	1/1:3,0:3:2.84:14,3,0	0/0:6,0:6:5.87:0,6,35	0/0:9,0:9:9.03:0,9,192	1/1:19,0:19:0.39:131,0,0	1/1:25,0:25:5.48:194,5,0	0/1:9,0:9:6.77:21,0,7	1/1:6,0:6:0.47:1,0,0	0/0:7,0:7:3.45:0,3,22	0/1:4,0:4:16.12:16,0,31	0/0:7,0:7:3.44:0,3,45	0/0:2,0:2:0:0,0,0	0/0:11,0:11:6.02:0,6,104	1/1:15,0:15:12.03:164,12,0	0/1:10,0:10:11.56:12,0,31	0/0:3,0:3:2.88:0,3,15
chr10	109837244	.	A	AGC	979.20	PASS	AB=0.912;AC=19;AF=0.339;AN=56;BaseQRankSum=4.338;DP=306;FS=30.561;HRun=0;HaplotypeScore=78.1909;InbreedingCoeff=-0.0459;MQ=62.26;MQ0=3;MQRankSum=-0.480;QD=5.18;ReadPosRankSum=0.859;VQSLOD=0.7026;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,1:14:36.54:41,0,37	0/0:11,0:11:27.02:0,27,385	0/0:7,0:6:18.06:0,18,294	0/0:6,0:6:9:0,9,119	0/0:13,0:13:32.07:0,32,189	0/0:13,0:13:2.64:0,3,119	0/1:8,0:8:6.54:7,0,70	0/1:25,0:22:87.40:87,0,350	0/0:8,0:8:9.03:0,9,134	0/0:13,0:13:39.12:0,39,613	0/0:17,0:17:48.13:0,48,755	0/1:6,0:7:13.28:21,0,13	0/1:7,0:7:29.49:29,0,38	0/0:6,0:6:7.29:0,7,27	0/1:5,2:7:1.63:66,0,2	0/0:12,0:12:36.12:0,36,587	0/1:14,1:15:2.29:92,0,2	0/1:19,2:21:66.10:178,0,66	0/1:15,1:16:95.90:137,0,96	0/1:8,1:9:13.46:34,0,13	1/1:8,0:8:4.80:15,5,0	0/1:9,1:10:13.29:27,0,13	0/1:9,2:11:10.63:44,0,11	0/0:2,0:2:5.04:0,5,35	0/0:9,0:9:6:0,6,55	1/1:14,0:14:23.47:177,23,0	0/1:7,2:9:59.81:127,0,60	1/1:7,1:7:3.54:59,4,0
chr10	109837245	.	A	AAG	570.82	PASS	AB=0.924;AC=17;AF=0.304;AN=56;BaseQRankSum=5.540;DP=308;FS=13.545;HRun=0;HaplotypeScore=79.4252;InbreedingCoeff=-0.2776;MQ=63.74;MQ0=3;MQRankSum=-1.136;QD=3.34;ReadPosRankSum=2.938;VQSLOD=0.9723;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,1:14:31.74:32,0,63	0/0:11,0:11:33.05:0,33,440	0/0:8,0:7:18.06:0,18,294	0/0:6,0:6:14.97:0,15,150	0/0:13,0:13:23.57:0,24,249	0/0:12,0:12:29.44:0,29,241	0/0:8,0:8:20.55:0,21,145	0/0:25,0:22:16.25:0,16,523	0/0:8,0:8:8.39:0,8,88	0/0:13,0:13:39.13:0,39,616	0/0:18,0:18:51.14:0,51,783	0/1:6,0:7:17.17:17,0,39	0/1:7,0:7:23:23,0,51	0/1:6,0:6:9.51:10,0,40	0/1:5,0:7:10.81:56,0,11	0/0:13,0:13:36.12:0,36,584	0/1:15,1:16:58.67:59,0,115	0/1:19,2:21:63.09:63,0,165	0/1:14,1:15:73.23:73,0,157	0/1:8,1:9:22.79:23,0,34	0/1:8,0:8:30.83:55,0,31	0/1:9,0:10:31.73:32,0,59	0/1:10,0:12:24.98:53,0,25	0/0:2,0:2:5.61:0,6,52	1/1:9,0:9:4.07:12,4,0	0/1:14,0:14:46.10:59,0,46	0/1:6,2:8:49.25:119,0,49	0/1:7,1:7:5.18:45,0,5
chr10	109837246	.	T	TAAATAAGC	7711.65	PASS	AB=0.904;AC=36;AF=0.643;AN=56;BaseQRankSum=5.472;DP=365;FS=12.326;HRun=0;HaplotypeScore=111.2474;InbreedingCoeff=0.3973;MQ=62.29;MQ0=3;MQRankSum=-8.583;QD=26.23;ReadPosRankSum=1.525;VQSLOD=3.4118;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:17:6.74:237,0,7	0/0:11,0:11:33.11:0,33,550	0/0:9,0:8:21.07:0,21,346	0/0:6,0:6:18.03:0,18,240	1/1:1,13:20:51.09:630,51,0	1/1:11,0:11:30.10:488,30,0	1/1:9,0:9:21.07:358,21,0	1/1:33,0:30:12.19:524,12,0	1/1:3,0:10:9.02:138,9,0	0/0:14,0:14:39.12:0,39,695	0/0:18,0:18:54.17:0,54,1009	0/1:10,0:10:2.97:297,0,3	1/1:7,0:8:23.80:265,24,0	0/1:8,0:8:10.15:237,0,10	1/1:14,0:14:39.12:586,39,0	0/0:13,0:13:39.12:0,39,676	0/1:16,0:17:99:349,0,137	0/1:10,0:24:41.41:176,0,41	1/1:21,0:21:28.61:579,29,0	1/1:10,0:10:27.08:325,27,0	0/1:9,0:9:27.85:200,0,28	0/1:14,0:14:6.84:432,0,7	1/1:12,0:12:31.33:447,31,0	1/1:4,0:4:11.95:118,12,0	1/1:0,9:9:6.02:266,6,0	0/1:14,0:14:17.16:415,0,17	1/1:10,0:10:23.89:289,24,0	1/1:10,0:9:27.09:356,27,0
chr10	109841329	.	CT	C	2951.50	PASS	AB=0.739;AC=31;AF=0.554;AN=56;BaseQRankSum=6.250;DP=601;FS=3.574;HRun=14;HaplotypeScore=68.9466;InbreedingCoeff=0.2051;MQ=69.18;MQ0=3;MQRankSum=0.062;QD=6.47;ReadPosRankSum=3.599;VQSLOD=2.7640;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,23:35:7.87:326,8,0	0/1:2,1:5:11.74:12,0,33	0/1:22,2:15:33.35:39,0,33	0/1:10,3:11:4.81:5,0,37	0/1:9,16:29:40.23:228,0,40	0/1:7,18:26:29.20:223,0,29	0/1:7,6:20:21.49:119,0,21	1/1:14,22:37:54.03:373,54,0	1/1:5,8:16:32.72:197,33,0	0/0:25,0:25:19.29:0,19,312	0/0:22,4:26:10.33:0,10,371	0/0:18,0:18:22.76:0,23,187	0/0:19,1:21:14.49:0,14,269	0/0:11,0:12:17.05:0,17,173	0/0:22,2:24:36.44:0,36,466	0/1:19,4:23:7.72:8,0,352	1/1:10,14:25:27.59:277,28,0	1/1:4,12:18:9.94:155,10,0	0/1:6,10:19:37.86:143,0,38	1/1:10,5:16:9.94:66,10,0	1/1:8,13:23:42.68:279,43,0	0/1:20,2:23:14.51:15,0,188	0/1:13,4:18:16.05:16,0,132	0/0:19,0:18:32.96:0,33,288	1/1:6,10:16:10.03:148,10,0	1/1:15,13:30:15.14:211,15,0	1/1:15,16:33:43.74:270,44,0	0/1:2,2:5:16.90:36,0,17
chr10	109841798	.	GA	G	1028.49	PASS	AB=0.770;AC=11;AF=0.196;AN=56;BaseQRankSum=4.162;DP=630;FS=4.598;HRun=14;HaplotypeScore=74.6916;InbreedingCoeff=0.1702;MQ=66.92;MQ0=12;MQRankSum=0.604;QD=5.19;ReadPosRankSum=1.359;VQSLOD=2.5550;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:37:57.22:0,57,633	0/1:6,1:7:2.56:3,0,121	0/0:48,2:15:3.47:0,3,107	0/1:38,1:16:4.35:4,0,36	1/1:9,23:35:51:459,51,0	0/1:6,12:18:61.19:185,0,61	0/1:4,12:17:20.89:156,0,21	0/0:30,0:29:39.13:0,39,488	1/1:5,9:14:1.88:156,2,0	0/0:24,0:27:46.70:0,47,403	0/0:16,0:18:38.70:0,39,292	0/0:16,0:16:33.03:0,33,303	0/0:15,0:15:38.68:0,39,321	0/0:22,0:22:31.11:0,31,398	0/0:19,1:21:27.29:0,27,377	0/0:20,0:21:9.88:0,10,350	0/0:20,2:23:18.61:0,19,427	0/1:23,3:27:10.70:11,0,322	0/0:22,0:20:36.04:0,36,332	0/0:20,1:23:15.90:0,16,276	0/0:10,0:10:4.73:0,5,178	0/1:16,1:19:2.68:3,0,132	0/0:24,0:25:27.51:0,28,380	0/0:17,0:17:35.98:0,36,321	0/1:5,15:21:11.49:191,0,11	0/0:21,1:23:12.75:0,13,388	0/0:15,0:15:36.04:0,36,334	0/0:15,0:16:32.02:0,32,308
chr10	109842666	.	G	GCATACATC	57198.39	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-8.904;DP=792;FS=4.220;HRun=0;HaplotypeScore=190.5643;InbreedingCoeff=0.9830;MQ=75.67;MQ0=0;MQRankSum=-16.848;QD=87.86;ReadPosRankSum=2.161;VQSLOD=5.3482;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,18:43:69.19:2960,69,0	0/0:19,0:19:57.20:0,57,1636	0/0:29,0:29:87.28:0,87,2416	0/0:23,0:24:69.24:0,69,1857	1/1:11,11:24:15.05:641,15,0	1/1:11,8:23:39.13:1724,39,0	1/1:11,19:31:72.20:2979,72,0	1/1:23,18:44:99:4838,126,0	1/1:8,19:29:72.25:3184,72,0	0/0:23,0:23:60.21:0,60,1665	0/0:18,0:18:51.18:0,51,1463	1/1:9,30:43:99:4626,108,0	1/1:10,22:35:87.26:3720,87,0	1/1:8,28:36:84.25:3618,84,0	1/1:11,15:32:57.20:2460,57,0	0/0:28,0:28:75.26:0,75,2075	1/1:4,14:19:48.16:2138,48,0	1/1:1,3:6:9.03:402,9,0	1/1:13,12:27:72.23:2787,72,0	1/1:8,23:37:69.11:2726,69,0	1/1:15,12:34:45.15:1847,45,0	1/1:14,17:31:54.19:2341,54,0	1/1:9,12:23:30.10:1311,30,0	1/1:6,14:22:24.35:1045,24,0	1/1:7,20:29:75.21:3156,75,0	1/1:15,23:42:40.64:4947,41,0	1/1:11,17:33:72.20:2947,72,0	1/1:0,7:7:18.06:802,18,0
chr10	109843385	.	G	GC	15930.20	PASS	AB=0.900;AC=53;AF=0.981;AN=54;BaseQRankSum=-2.417;DP=462;FS=0.000;HRun=2;HaplotypeScore=56.3536;InbreedingCoeff=0.4539;MQ=52.88;MQ0=5;MQRankSum=-2.423;QD=35.09;ReadPosRankSum=1.125;VQSLOD=5.0511;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,33:36:75.25:1080,75,0	1/1:1,3:4:9.03:130,9,0	./.	0/1:8,1:3:2.75:3,0,33	1/1:0,15:15:33.11:474,33,0	1/1:0,21:22:66.22:938,66,0	1/1:4,10:13:18.06:259,18,0	1/1:7,20:27:69.19:964,69,0	1/1:1,11:12:30.10:431,30,0	1/1:0,20:20:57.19:819,57,0	1/1:0,15:15:33.11:475,33,0	1/1:0,12:12:30.10:432,30,0	1/1:0,16:16:45.15:648,45,0	1/1:1,18:18:39.13:559,39,0	1/1:0,13:13:36.12:518,36,0	1/1:0,15:15:39.13:561,39,0	1/1:0,27:27:69.23:993,69,0	1/1:0,15:15:42.14:604,42,0	1/1:0,9:9:27.07:369,27,0	1/1:0,18:18:48.16:690,48,0	1/1:0,13:13:39.13:561,39,0	1/1:0,16:17:39.11:540,39,0	1/1:0,18:18:48.16:691,48,0	1/1:0,14:14:33.11:475,33,0	1/1:3,17:20:51.17:730,51,0	1/1:1,17:18:45.15:648,45,0	1/1:2,20:22:57.19:820,57,0	1/1:1,13:14:36.12:518,36,0
chr10	109843438	.	TA	T	1950.29	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.343;DP=491;FS=2.653;HRun=10;HaplotypeScore=76.8478;InbreedingCoeff=0.9651;MQ=60.04;MQ0=1;MQRankSum=-0.289;QD=19.90;ReadPosRankSum=1.635;VQSLOD=4.6273;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.22:0,81,896	0/0:9,0:9:27.06:0,27,290	0/0:8,0:4:11.87:0,12,113	0/0:5,0:4:5.99:0,6,52	1/1:3,22:25:35.76:539,36,0	1/1:4,19:23:62.96:541,63,0	1/1:1,15:15:35.99:312,36,0	0/0:22,0:21:51.14:0,51,564	1/1:4,7:11:26.21:215,26,0	0/0:25,0:25:63.15:0,63,686	0/0:19,0:19:42.11:0,42,458	0/0:14,0:14:36.10:0,36,398	0/0:16,0:16:45.12:0,45,496	0/0:12,0:12:27.07:0,27,299	0/0:10,0:10:18.03:0,18,190	0/0:14,0:14:42.11:0,42,465	0/0:32,0:32:81.19:0,81,878	0/0:16,0:17:50.97:0,51,545	0/0:17,0:16:42.07:0,42,449	0/0:26,0:27:75.04:0,75,809	0/0:14,0:14:36.07:0,36,382	0/0:9,0:9:24.06:0,24,266	0/0:16,0:16:36.10:0,36,398	0/0:13,0:13:33.09:0,33,365	1/1:2,21:23:59.98:517,60,0	0/0:24,0:24:69.19:0,69,763	0/0:21,1:22:25.06:0,25,495	0/0:16,0:16:48.13:0,48,531
chr10	109844767	.	T	TACACACACACACACAC	1732.68	PASS	AB=0.954;AC=14;AF=0.250;AN=56;BaseQRankSum=-3.912;DP=648;FS=0.000;HRun=0;HaplotypeScore=285.6208;InbreedingCoeff=0.3912;MQ=68.22;MQ0=11;MQRankSum=-1.309;QD=8.54;ReadPosRankSum=-0.318;VQSLOD=1.9403;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:43:70.72:71,0,1482	0/1:8,0:8:76.33:76,0,187	0/0:37,0:23:4.26:0,4,22	0/0:54,0:26:11.64:0,12,129	1/1:25,0:26:9.03:170,9,0	1/1:22,0:23:14.26:498,14,0	1/1:20,0:19:21.02:372,21,0	0/1:18,0:16:23.86:90,0,24	1/1:16,1:15:11.32:502,11,0	0/0:30,0:29:27.02:0,27,626	0/0:19,0:19:27.08:0,27,771	0/0:22,0:22:6.11:0,6,689	0/0:16,0:17:27.07:0,27,584	0/0:18,0:18:15.73:0,16,367	0/0:22,0:22:38.17:0,38,1178	0/0:23,0:24:36.12:0,36,1044	0/0:23,0:23:43.96:0,44,1285	0/1:21,0:21:99:100,0,867	0/1:14,0:14:20.09:20,0,109	0/0:21,0:21:24.08:0,24,721	0/0:31,0:30:0.22:0,0,1128	0/0:27,0:27:41.97:0,42,1057	0/0:13,0:14:14.41:0,14,377	0/0:18,0:18:26.95:0,27,896	0/1:8,5:13:0:0,0,0	0/0:28,0:28:38.94:0,39,946	0/0:26,0:25:20.07:0,20,1077	0/0:13,0:13:21.07:0,21,638
chr10	109844799	.	CAG	C	4076.31	PASS	AB=0.867;AC=20;AF=0.357;AN=56;BaseQRankSum=3.735;DP=700;FS=33.264;HRun=0;HaplotypeScore=147.3280;InbreedingCoeff=-0.2745;MQ=59.28;MQ0=17;MQRankSum=-2.156;QD=8.86;ReadPosRankSum=-3.454;VQSLOD=0.9434;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:35,9:44:99:411,0,270	0/0:8,0:8:20.81:0,21,258	0/0:35,0:17:34.29:0,34,387	0/0:52,0:21:31.97:0,32,304	0/0:24,2:26:2.62:0,3,171	0/1:22,0:22:19.74:20,0,122	0/0:23,0:22:30.07:0,30,278	1/1:26,2:27:29.87:470,30,0	0/0:15,2:16:25.61:0,26,253	0/0:26,0:25:59.98:0,60,781	0/0:19,0:19:43.86:0,44,527	0/1:20,4:24:99:221,0,127	0/1:15,6:21:99:248,0,102	0/1:16,5:21:33.54:282,0,34	0/1:22,8:30:99:367,0,121	0/0:23,0:23:41.41:0,41,711	0/1:21,6:27:99:289,0,191	0/1:25,3:28:99:232,0,142	1/1:12,0:11:9.02:158,9,0	0/1:18,3:21:99:126,0,148	0/1:37,7:43:99:384,0,182	0/1:25,2:27:78.61:79,0,273	0/1:10,3:13:56.41:115,0,56	0/1:24,3:27:99:162,0,125	0/0:11,0:11:20.58:0,21,170	0/1:23,0:23:74.75:75,0,287	0/1:24,5:29:99:316,0,174	0/1:16,2:18:98.63:123,0,99
chr10	109848761	.	A	AT	1816.47	PASS	AB=0.500;AC=47;AF=0.870;AN=54;BaseQRankSum=-0.433;DP=183;FS=0.000;HRun=2;HaplotypeScore=68.9523;InbreedingCoeff=0.3352;MQ=40.24;MQ0=0;MQRankSum=-1.732;QD=10.15;ReadPosRankSum=1.429;VQSLOD=1.5000;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:13:0.47:1,0,0	1/1:0,4:4:5.74:31,6,0	1/1:1,1:2:3.01:43,3,0	0/0:3,0:3:1.69:0,2,28	1/1:4,5:9:3.01:38,3,0	1/1:0,8:8:5.72:29,6,0	1/1:0,9:9:14.36:85,14,0	1/1:0,2:2:6.02:65,6,0	1/1:0,2:2:2.90:16,3,0	1/1:0,17:17:48.08:502,48,0	1/1:1,6:7:8.31:39,8,0	0/1:0,5:5:0:0,0,0	0/1:0,6:6:0:0,0,0	0/1:0,10:10:0:0,0,0	0/1:0,6:6:0:0,0,0	1/1:0,9:9:5.82:33,6,0	1/1:0,5:5:2.84:14,3,0	1/1:0,4:4:12.03:133,12,0	1/1:0,1:1:3.01:33,3,0	1/1:0,7:7:16.84:83,17,0	./.	1/1:0,3:3:2.88:15,3,0	1/1:0,9:9:5.47:25,5,0	0/1:0,4:4:0.01:0,0,0	1/1:0,9:9:16.95:84,17,0	1/1:0,11:11:33.07:340,33,0	1/1:0,12:12:21.04:211,21,0	1/1:0,3:3:8.97:86,9,0
chr10	109848839	.	A	AACC	646.32	PASS	AB=0.930;AC=10;AF=0.185;AN=54;BaseQRankSum=4.054;DP=370;FS=0.000;HRun=0;HaplotypeScore=136.0740;InbreedingCoeff=0.1883;MQ=53.82;MQ0=21;MQRankSum=1.832;QD=8.08;ReadPosRankSum=1.794;VQSLOD=2.6919;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:6:70.26:75,0,70	0/0:5,0:5:15.05:0,15,213	0/0:82,0:13:18.30:0,18,296	0/0:77,0:19:12.81:0,13,230	0/0:10,0:8:5.81:0,6,18	0/0:8,0:8:16.33:0,16,114	0/0:6,0:6:12:0,12,135	0/0:4,0:4:7.47:0,7,30	0/0:6,0:3:8.98:0,9,92	0/0:18,0:17:37.57:0,38,535	0/0:11,0:10:17.67:0,18,182	0/0:4,0:3:5.88:0,6,54	0/0:5,0:2:2.80:0,3,13	0/0:6,0:3:0:0,0,0	0/0:9,0:9:16.75:0,17,178	0/0:9,0:8:17.79:0,18,231	1/1:2,0:3:3.37:17,3,0	0/1:4,0:3:5.96:6,0,7	0/1:12,1:9:88.07:97,0,88	0/1:6,1:8:5.23:114,0,5	0/0:6,0:5:0.90:0,1,3	0/0:7,0:6:11.98:0,12,119	0/0:6,0:6:3.85:0,4,49	./.	0/0:8,0:7:14.97:0,15,140	0/1:19,2:23:38.40:270,0,38	1/1:11,2:11:14.14:172,14,0	0/1:7,0:7:23.24:32,0,23
chr10	109848840	.	A	ACC	370.90	PASS	AB=0.944;AC=10;AF=0.185;AN=54;BaseQRankSum=3.930;DP=379;FS=7.147;HRun=0;HaplotypeScore=135.6208;InbreedingCoeff=-0.1017;MQ=56.32;MQ0=21;MQRankSum=1.241;QD=2.28;ReadPosRankSum=2.321;VQSLOD=2.1307;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:6:50.39:50,0,90	0/0:6,0:6:15.05:0,15,206	0/0:83,0:15:10.52:0,11,265	0/1:82,0:20:0.99:1,0,204	0/0:10,0:8:8.63:0,9,48	0/0:8,0:8:16.21:0,16,144	0/0:6,0:6:11.99:0,12,138	0/0:4,0:4:5.34:0,5,32	0/0:6,0:3:9.03:0,9,110	0/0:18,0:17:50.26:0,50,605	0/0:11,0:10:21.23:0,21,209	0/0:4,0:3:5.81:0,6,53	0/0:5,0:2:3.01:0,3,31	0/0:6,0:3:2.97:0,3,20	0/0:9,0:9:20.86:0,21,216	0/0:9,0:8:18.02:0,18,233	1/1:2,1:3:2.05:7,2,0	0/1:3,1:3:3.06:3,0,27	0/1:11,2:9:75.87:76,0,130	0/1:8,0:8:32.26:72,0,32	0/0:6,0:5:3.47:0,3,9	0/0:7,0:6:11.98:0,12,122	0/0:6,0:6:9.07:0,9,68	./.	0/0:8,0:7:14.99:0,15,146	0/1:22,1:23:99:186,0,121	0/1:14,1:11:17.79:80,0,18	0/1:7,0:7:20.11:20,0,43
chr10	109848841	.	A	ACC	90.76	PASS	AB=0.875;AC=7;AF=0.130;AN=54;BaseQRankSum=4.796;DP=385;FS=0.000;HRun=0;HaplotypeScore=138.6929;InbreedingCoeff=-0.1274;MQ=60.25;MQ0=21;MQRankSum=0.307;QD=1.19;ReadPosRankSum=2.515;VQSLOD=2.4739;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:4,3:6:17.98:18,0,86	0/0:6,0:6:15.05:0,15,205	0/0:87,0:17:31.64:0,32,279	0/0:85,0:21:19.12:0,19,270	0/0:10,0:8:8.66:0,9,53	0/0:8,0:8:17.96:0,18,172	0/0:6,0:6:9.03:0,9,118	0/0:4,0:4:5.53:0,6,46	0/0:6,0:3:9.01:0,9,103	0/0:19,0:18:50.24:0,50,618	0/0:12,0:10:24.47:0,24,254	0/0:4,0:3:5.91:0,6,55	0/0:5,0:2:3.01:0,3,30	0/0:6,0:3:2.97:0,3,20	0/0:9,0:9:20.96:0,21,221	0/0:9,0:8:18.04:0,18,233	0/1:3,0:3:0.68:1,0,3	0/0:4,0:3:0.70:0,1,17	0/1:13,0:9:2.13:2,0,138	0/1:4,4:8:18.41:46,0,18	0/0:6,0:5:5.29:0,5,34	0/0:7,0:6:12.01:0,12,129	0/0:5,0:6:8.40:0,8,67	./.	0/0:8,0:7:15.01:0,15,149	0/1:20,3:23:69.85:110,0,70	0/1:15,0:11:16.42:16,0,51	0/1:6,1:7:7.96:8,0,48
chr10	109848845	.	AAACC	A	1742.05	PASS	AB=0.986;AC=40;AF=0.741;AN=54;BaseQRankSum=7.958;DP=395;FS=0.000;HRun=0;HaplotypeScore=143.6127;InbreedingCoeff=0.0023;MQ=66.02;MQ0=22;MQRankSum=-0.102;QD=5.97;ReadPosRankSum=3.533;VQSLOD=2.4275;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:5,1:6:4.16:69,0,4	1/1:6,0:6:3.27:82,3,0	0/0:92,0:19:11.03:0,11,435	0/1:94,0:27:7.23:7,0,453	1/1:10,0:8:8.83:55,9,0	0/1:8,0:8:46.61:48,0,47	0/1:5,0:5:4.34:4,0,36	1/1:4,0:4:5.97:27,6,0	0/1:6,0:3:14.12:19,0,14	0/1:20,0:19:42.92:232,0,43	1/1:13,0:11:20.79:186,21,0	1/1:4,0:3:2.38:9,2,0	1/1:4,0:2:2.74:12,3,0	1/1:6,0:3:2.92:17,3,0	0/1:9,0:9:9.49:49,0,9	1/1:9,0:8:8.43:51,8,0	0/1:3,0:3:0.91:1,0,2	1/1:4,0:3:4.17:36,4,0	0/1:13,0:9:34.16:49,0,34	1/1:8,0:8:23.83:224,24,0	1/1:4,2:5:8.40:42,8,0	0/1:6,0:5:0.27:22,0,0	1/1:5,0:5:2.42:36,2,0	./.	0/0:8,0:7:3.14:0,3,42	1/1:20,2:23:11.10:362,11,0	1/1:13,0:11:4.16:113,4,0	1/1:6,0:7:17.74:131,18,0
chr10	109848847	.	ACCC	A	3715.64	PASS	AB=0.881;AC=47;AF=0.870;AN=54;BaseQRankSum=6.079;DP=374;FS=2.465;HRun=3;HaplotypeScore=131.2109;InbreedingCoeff=-0.1532;MQ=68.88;MQ0=22;MQRankSum=-1.272;QD=9.99;ReadPosRankSum=2.724;VQSLOD=0.4718;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,3:6:8.45:146,8,0	1/1:5,0:6:13.36:101,13,0	0/1:95,0:20:12.83:13,0,382	0/1:94,0:27:33.24:33,0,395	1/1:2,1:5:9.50:123,10,0	0/1:4,2:6:44.14:106,0,44	0/1:3,0:3:2.78:11,0,3	1/1:1,0:4:8.97:82,9,0	1/1:2,2:2:5.98:65,6,0	0/1:15,0:18:4.02:205,0,4	1/1:9,0:10:26.47:202,26,0	1/1:2,1:3:5.60:40,6,0	1/1:1,2:2:3.01:32,3,0	1/1:2,2:3:3.01:40,3,0	1/1:5,3:8:15.39:161,15,0	1/1:6,0:8:16.34:90,16,0	1/1:1,2:3:6.38:44,6,0	1/1:2,1:3:8.69:81,9,0	0/1:5,2:5:2.11:110,0,2	1/1:1,7:8:24.06:337,24,0	1/1:5,0:5:8.85:73,9,0	1/1:3,2:5:10.13:97,10,0	1/1:2,3:5:9:102,9,0	./.	0/1:4,0:5:34.25:39,0,34	1/1:10,12:23:38.05:776,38,0	1/1:1,8:11:32.09:353,32,0	1/1:2,1:7:18.06:253,18,0
chr10	109848851	.	AAC	A	1365.95	PASS	AB=0.914;AC=42;AF=0.778;AN=54;BaseQRankSum=5.125;DP=380;FS=0.000;HRun=0;HaplotypeScore=137.2981;InbreedingCoeff=0.1927;MQ=68.39;MQ0=23;MQRankSum=-0.847;QD=8.13;ReadPosRankSum=3.700;VQSLOD=3.1717;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,1:5:5.06:69,5,0	1/1:6,0:6:10.70:59,11,0	0/0:99,0:21:12.11:0,12,530	0/0:99,0:30:4.09:0,4,454	1/1:4,2:5:9.18:49,9,0	0/1:5,1:6:45.65:95,0,46	0/1:4,0:4:16.75:17,0,31	1/1:4,0:4:5.85:58,6,0	1/1:4,0:2:2.96:19,3,0	1/1:18,0:18:11.36:162,11,0	1/1:13,0:11:22.62:101,23,0	1/1:2,1:3:5.05:46,5,0	0/0:3,1:2:0.47:0,0,1	1/1:2,1:3:2.80:13,3,0	1/1:6,1:7:14.82:115,15,0	1/1:10,0:9:6.31:76,6,0	0/0:2,1:3:4.71:0,5,20	1/1:4,0:3:4.51:15,5,0	1/1:3,2:4:6.59:99,7,0	1/1:8,0:8:13.73:62,14,0	1/1:7,0:6:3.21:31,3,0	1/1:3,1:5:3.94:59,4,0	1/1:5,0:5:0.33:16,0,0	./.	0/1:3,1:4:34.12:68,0,34	1/1:21,1:22:6.10:170,6,0	0/1:12,0:11:9.79:38,0,10	1/1:7,0:7:12.73:69,13,0
chr10	109848852	.	ACC	A	2261.80	PASS	AB=0.888;AC=46;AF=0.852;AN=54;BaseQRankSum=6.110;DP=385;FS=10.322;HRun=2;HaplotypeScore=134.6424;InbreedingCoeff=0.1690;MQ=70.35;MQ0=23;MQRankSum=-2.285;QD=13.00;ReadPosRankSum=4.593;VQSLOD=0.0700;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,3:5:14.76:128,15,0	1/1:6,0:6:8.51:31,9,0	0/0:99,0:23:10.46:0,10,517	0/0:97,2:30:4.65:0,5,462	1/1:5,1:5:9.49:94,9,0	0/1:4,2:6:42.40:100,0,42	0/1:3,1:4:18.34:37,0,18	1/1:4,0:4:8.87:66,9,0	1/1:2,1:1:3.01:32,3,0	0/1:18,0:18:12.43:70,0,12	1/1:12,0:11:12.26:60,12,0	1/1:3,0:3:5.99:57,6,0	1/1:4,0:2:2.96:19,3,0	1/1:3,0:3:3.01:32,3,0	1/1:6,1:7:15.04:182,15,0	1/1:9,1:9:8.74:46,9,0	1/1:1,2:3:4.83:20,5,0	1/1:3,1:3:6.37:43,6,0	1/1:4,1:4:11.97:98,12,0	1/1:2,6:8:23.89:210,24,0	1/1:7,0:6:8.72:57,9,0	1/1:5,0:5:8.86:86,9,0	1/1:3,2:5:8.43:57,8,0	./.	0/1:4,0:4:20.55:38,0,21	1/1:13,9:22:26.63:446,27,0	1/1:6,6:11:28.69:233,29,0	1/1:6,1:7:17.95:160,18,0
chr10	109848857	.	A	AC	232.10	PASS	AB=0.942;AC=14;AF=0.259;AN=54;BaseQRankSum=1.244;DP=428;FS=0.676;HRun=0;HaplotypeScore=159.4260;InbreedingCoeff=0.0032;MQ=73.64;MQ0=22;MQRankSum=-0.572;QD=1.18;ReadPosRankSum=1.088;VQSLOD=2.7711;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,1:9:11.20:58,0,11	0/0:6,0:6:17.87:0,18,129	0/0:116,0:32:49.76:0,50,485	0/1:112,0:36:12.98:13,0,438	0/1:10,0:9:14.06:14,0,21	0/1:6,1:7:16.91:17,0,44	1/1:2,0:2:1.88:7,2,0	0/0:6,0:6:9.40:0,9,47	0/0:4,0:2:4.46:0,4,20	0/0:19,0:19:11.20:0,11,209	0/0:12,0:10:26.14:0,26,149	0/1:3,0:3:1.27:1,0,5	0/0:4,0:2:2.88:0,3,15	0/0:4,0:4:4.78:0,5,17	0/0:7,0:7:5.84:0,6,28	0/0:11,0:10:13.32:0,13,127	0/0:3,0:3:5.93:0,6,39	1/1:5,0:4:1.14:28,1,0	0/1:5,1:5:23.82:36,0,24	0/1:10,0:10:39.70:40,0,44	1/1:5,2:6:4.69:19,5,0	0/0:5,0:5:5.17:0,5,17	0/0:5,0:5:5.27:0,5,24	./.	0/0:5,0:5:2.06:0,2,12	0/1:21,2:23:55.15:136,0,55	0/0:15,0:14:23.49:0,23,192	0/0:7,0:7:5.04:0,5,45
chr10	109848859	.	ACC	A	2688.39	PASS	AB=0.765;AC=38;AF=0.704;AN=54;BaseQRankSum=6.787;DP=420;FS=6.575;HRun=3;HaplotypeScore=153.4305;InbreedingCoeff=0.0289;MQ=75.23;MQ0=23;MQRankSum=-2.955;QD=14.94;ReadPosRankSum=5.742;VQSLOD=0.7896;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:9:17.66:73,0,18	1/1:0,4:6:18.06:228,18,0	0/0:112,0:32:26.12:0,26,856	0/0:113,0:37:27.95:0,28,613	1/1:5,0:9:11.28:163,11,0	0/1:5,0:7:37.87:40,0,38	1/1:2,0:2:2.97:20,3,0	0/1:3,3:6:24.36:65,0,24	1/1:1,0:2:5.99:53,6,0	1/1:4,11:18:42.58:493,43,0	1/1:1,5:10:29.28:314,29,0	0/1:2,0:3:15.64:18,0,16	1/1:2,0:2:2.96:19,3,0	1/1:1,0:3:6.02:65,6,0	0/1:4,0:7:12.26:84,0,12	1/1:4,3:9:21.06:249,21,0	1/1:2,0:3:4.78:17,5,0	1/1:3,2:4:1.34:53,1,0	0/0:3,2:4:6.53:0,7,22	0/1:8,2:10:28.30:110,0,28	0/1:4,1:5:0.89:1,0,1	1/1:3,0:5:3.19:46,3,0	1/1:2,0:5:8.78:60,9,0	./.	1/1:1,0:5:4.53:95,5,0	0/1:14,7:21:25.23:246,0,25	0/1:8,5:14:7.53:190,0,8	0/1:3,4:7:6.48:144,0,6
chr10	109848869	.	AC	A	3149	PASS	AB=0.980;AC=50;AF=0.926;AN=54;BaseQRankSum=4.050;DP=398;FS=1.276;HRun=2;HaplotypeScore=163.1859;InbreedingCoeff=0.2704;MQ=86.53;MQ0=16;MQRankSum=-3.613;QD=11.13;ReadPosRankSum=3.054;VQSLOD=2.2868;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,8:10:7:193,7,0	1/1:2,5:7:20.98:184,21,0	0/1:89,4:34:29.46:29,0,485	0/0:107,4:42:9.89:0,10,371	1/1:8,0:8:17.02:94,17,0	0/1:4,0:4:3.68:19,0,4	1/1:2,0:2:4.21:23,4,0	1/1:3,7:10:15.86:212,16,0	1/1:7,0:6:11.35:69,11,0	1/1:3,15:18:41.95:370,42,0	1/1:0,12:12:32.95:285,33,0	1/1:3,0:3:1.92:7,2,0	1/1:5,0:4:7.49:43,7,0	1/1:4,0:4:7.76:41,8,0	1/1:3,0:3:8.47:43,8,0	1/1:1,5:7:20.78:168,21,0	1/1:1,0:2:5.52:25,6,0	1/1:1,3:4:11.02:86,11,0	1/1:2,3:5:11.94:101,12,0	1/1:2,8:10:8.70:212,9,0	1/1:5,2:7:0.29:0,0,0	1/1:6,0:6:9.68:73,10,0	1/1:3,0:3:4.66:20,5,0	./.	1/1:5,0:5:11.63:76,12,0	1/1:7,14:21:41.24:438,41,0	1/1:5,8:16:10.83:280,11,0	1/1:2,5:7:6.42:169,6,0
chr10	109848873	.	ACC	A	4294.21	PASS	AB=1.000;AC=51;AF=0.944;AN=54;BaseQRankSum=3.268;DP=398;FS=4.845;HRun=6;HaplotypeScore=168.8275;InbreedingCoeff=0.4516;MQ=84.61;MQ0=13;MQRankSum=-2.601;QD=14.31;ReadPosRankSum=0.205;VQSLOD=1.1662;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:26.94:238,27,0	1/1:8,0:8:18.03:179,18,0	0/1:85,0:34:32.59:33,0,721	0/0:95,2:37:11.70:0,12,491	1/1:11,0:11:18.55:132,19,0	1/1:3,0:3:5.03:34,5,0	1/1:3,0:3:8.81:64,9,0	1/1:12,0:12:32.81:279,33,0	1/1:9,0:8:23.94:214,24,0	1/1:18,1:19:44.54:383,45,0	1/1:11,1:11:31.93:268,32,0	1/1:6,0:6:13.49:102,13,0	1/1:8,0:8:20.86:169,21,0	1/1:10,0:10:20.88:173,21,0	1/1:4,0:4:11.95:97,12,0	1/1:9,0:9:25.92:200,26,0	1/1:2,0:2:5.82:32,6,0	1/1:6,0:5:9.44:78,9,0	1/1:8,0:8:21:186,21,0	1/1:9,0:9:23.76:196,24,0	1/1:6,0:6:0.47:1,0,0	1/1:5,0:5:13.06:112,13,0	1/1:5,0:6:10.12:52,10,0	./.	1/1:6,0:6:11.99:105,12,0	1/1:21,0:21:53.63:449,54,0	1/1:15,1:16:44.14:357,44,0	1/1:6,0:6:18.01:161,18,0
chr10	109848878	.	CCA	C	7831.23	PASS	AB=0.937;AC=51;AF=0.944;AN=54;BaseQRankSum=0.853;DP=406;FS=14.534;HRun=0;HaplotypeScore=162.9203;InbreedingCoeff=0.4998;MQ=84.59;MQ0=10;MQRankSum=-3.912;QD=24.55;ReadPosRankSum=1.760;VQSLOD=5.0551;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,10:12:33.01:410,33,0	1/1:0,8:8:21.04:292,21,0	0/1:68,5:32:99:188,0,645	0/0:84,1:36:12.53:0,13,484	1/1:5,8:13:28:298,28,0	1/1:0,3:3:8.91:84,9,0	1/1:1,2:3:9:105,9,0	1/1:0,12:12:33.10:484,33,0	1/1:2,8:9:27.05:369,27,0	1/1:5,15:20:50.53:656,51,0	1/1:4,10:14:35.81:414,36,0	1/1:0,8:8:14.94:181,15,0	1/1:0,8:8:21.07:289,21,0	1/1:1,10:11:23.99:306,24,0	1/1:6,3:9:26.89:275,27,0	1/1:5,5:10:29.95:338,30,0	1/1:1,2:3:8.95:68,9,0	1/1:2,5:6:14.83:160,15,0	1/1:1,8:9:24.01:342,24,0	1/1:0,9:9:23.56:302,24,0	1/1:8,4:12:16.86:110,17,0	1/1:1,5:6:17.92:195,18,0	1/1:1,5:6:11.86:117,12,0	./.	1/1:1,5:6:12.04:186,12,0	1/1:6,16:22:60.01:800,60,0	1/1:4,14:18:50.78:592,51,0	1/1:0,6:6:18.06:270,18,0
chr10	109848879	.	CA	C	2903.03	PASS	AB=1.000;AC=51;AF=0.944;AN=54;BaseQRankSum=0.950;DP=406;FS=21.022;HRun=5;HaplotypeScore=175.8543;InbreedingCoeff=0.4195;MQ=85.10;MQ0=9;MQRankSum=-3.239;QD=8.96;ReadPosRankSum=1.529;VQSLOD=0.1189;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:33.69:185,34,0	1/1:8,0:8:20.18:111,20,0	0/1:73,0:32:28.82:29,0,332	0/0:80,0:35:30.25:0,30,393	1/1:13,1:14:25.33:158,25,0	1/1:3,0:3:2.87:15,3,0	1/1:4,0:4:10.33:59,10,0	1/1:12,0:12:29.54:168,30,0	1/1:9,1:9:25.72:135,26,0	1/1:20,1:21:43.04:228,43,0	1/1:14,0:13:23.07:127,23,0	1/1:8,0:8:11.49:61,11,0	1/1:8,0:8:19.87:108,20,0	1/1:11,0:11:22.93:120,23,0	1/1:8,1:9:26.07:157,26,0	1/1:10,0:10:22.27:132,22,0	1/1:3,0:3:1.43:17,1,0	1/1:7,1:7:11.76:78,12,0	1/1:9,0:9:23.24:134,23,0	1/1:9,0:9:18.40:108,18,0	1/1:12,0:12:13.87:96,14,0	1/1:6,0:6:11.47:63,11,0	1/1:6,0:6:7.82:37,8,0	./.	1/1:6,0:6:11.47:59,11,0	1/1:23,0:23:54.36:319,54,0	1/1:18,0:18:38.87:216,39,0	1/1:6,0:6:17.36:98,17,0
chr10	109848880	.	A	AC	5313.50	PASS	AB=0.993;AC=50;AF=0.926;AN=54;BaseQRankSum=-0.804;DP=410;FS=31.557;HRun=6;HaplotypeScore=168.2080;InbreedingCoeff=-0.0860;MQ=84.14;MQ0=8;MQRankSum=-1.574;QD=13.02;ReadPosRankSum=4.880;VQSLOD=2.1667;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:35.49:311,35,0	1/1:8,0:8:20.38:120,20,0	0/1:70,1:31:99:103,0,403	0/1:76,1:34:19.61:20,0,378	1/1:14,0:14:19.60:270,20,0	1/1:3,0:3:0.05:14,0,0	1/1:5,1:6:11.93:113,12,0	1/1:12,0:12:31.13:254,31,0	1/1:10,0:9:26.72:268,27,0	1/1:23,1:24:44.75:393,45,0	0/1:14,0:13:14.91:128,0,15	1/1:8,0:8:12.75:104,13,0	1/1:8,0:8:20.87:212,21,0	1/1:10,1:11:23.85:235,24,0	1/1:9,0:9:26.90:327,27,0	1/1:9,1:10:13.69:165,14,0	1/1:3,0:3:8.99:95,9,0	1/1:9,1:9:14.79:143,15,0	1/1:9,0:9:23.95:223,24,0	1/1:9,0:9:19.77:145,20,0	1/1:10,2:12:16.94:231,17,0	0/1:6,0:6:2.13:81,0,2	1/1:6,0:6:3.74:102,4,0	./.	1/1:5,1:6:11.94:90,12,0	1/1:22,2:24:61.70:579,62,0	1/1:18,0:18:47.34:424,47,0	1/1:7,0:7:17.97:163,18,0
chr10	109861220	.	TG	T	17938.33	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=17.733;DP=753;FS=3.615;HRun=2;HaplotypeScore=115.5074;InbreedingCoeff=0.9955;MQ=86.37;MQ0=0;MQRankSum=-4.681;QD=36.24;ReadPosRankSum=3.292;VQSLOD=4.6578;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:99:1285,99,0	0/0:12,0:12:36.12:0,36,539	0/0:31,0:31:67.81:0,68,1176	0/0:19,0:19:51.16:0,51,726	0/0:21,0:21:63.20:0,63,924	0/0:19,0:19:54.18:0,54,809	0/0:33,0:33:99:0,99,1451	1/1:1,25:26:72.22:921,72,0	0/0:34,0:34:99:0,99,1467	0/0:24,0:24:72.24:0,72,1075	0/0:11,0:11:33.11:0,33,493	1/1:0,40:40:99:1480,114,0	1/1:0,28:28:81.26:1052,81,0	1/1:1,35:36:99:1324,102,0	1/1:0,36:36:99:1318,102,0	0/0:33,0:33:99:0,99,1484	1/1:2,32:34:87.28:1129,87,0	1/1:3,16:19:48.16:623,48,0	1/1:2,19:21:54.17:700,54,0	1/1:0,17:17:48.16:623,48,0	1/1:1,63:64:99:2359,184,0	1/1:0,25:25:72.23:934,72,0	1/1:0,17:17:51.17:662,51,0	1/1:2,42:44:99:1519,117,0	0/0:21,0:20:63.20:0,63,925	1/1:1,32:33:93.28:1191,93,0	1/1:0,17:17:51.17:662,51,0	1/1:0,4:4:12.04:156,12,0
chr10	109867589	.	T	TGG	33.78	PASS	AB=0.918;AC=9;AF=0.167;AN=54;BaseQRankSum=3.415;DP=338;FS=8.504;HRun=0;HaplotypeScore=70.9764;InbreedingCoeff=-0.1941;MQ=43.56;MQ0=29;MQRankSum=-3.036;QD=0.33;ReadPosRankSum=2.430;VQSLOD=0.6776;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,1:15:8.02:0,8,112	0/0:6,0:6:18.06:0,18,254	0/0:14,0:3:4.51:0,5,13	0/0:18,0:5:4.77:0,5,86	0/0:22,0:22:60.15:0,60,879	0/0:13,0:11:30.10:0,30,456	0/0:12,0:9:21.07:0,21,308	0/1:20,1:17:31.03:31,0,177	0/0:13,0:13:30.99:0,31,464	0/0:16,0:13:39.11:0,39,525	0/0:11,0:8:21.06:0,21,294	0/0:7,0:7:13.74:0,14,117	0/1:7,1:8:0.67:1,0,91	0/0:13,0:13:21.05:0,21,127	0/1:17,1:16:4.01:4,0,156	0/0:12,0:11:30.10:0,30,447	0/1:6,3:9:41.15:41,0,64	0/0:7,1:8:3.43:0,3,49	0/1:11,1:8:14.39:14,0,86	0/1:5,1:4:15.58:38,0,16	./.	0/1:6,0:6:14.61:15,0,48	0/0:11,0:10:7.60:0,8,55	0/0:7,0:4:5.96:0,6,48	0/0:17,0:17:48.12:0,48,693	0/1:14,0:11:4.58:5,0,151	0/0:13,1:13:7.84:0,8,174	0/1:8,0:7:6.25:6,0,122
chr10	109868351	.	CT	C	17801.29	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=16.419;DP=706;FS=0.000;HRun=2;HaplotypeScore=105.5418;InbreedingCoeff=0.9991;MQ=84.05;MQ0=0;MQRankSum=-6.710;QD=37.88;ReadPosRankSum=2.966;VQSLOD=4.7052;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:78.26:1083,78,0	0/0:8,0:8:24.08:0,24,360	0/0:30,0:30:67.19:0,67,1250	0/0:24,0:24:68.86:0,69,1008	0/0:14,0:14:42.14:0,42,669	0/0:13,0:13:39.13:0,39,621	0/0:25,0:25:72.23:0,72,1125	1/1:0,28:28:81.23:1075,81,0	0/0:23,0:23:69.18:0,69,1026	0/0:29,0:29:87.30:0,87,1386	0/0:17,0:17:51.17:0,51,815	1/1:0,35:35:90.30:1257,90,0	1/1:0,24:24:69.23:963,69,0	1/1:0,24:24:54.18:753,54,0	1/1:0,25:25:72.24:1006,72,0	0/0:33,0:33:99:0,99,1576	1/1:0,42:42:99:1586,114,0	1/1:0,33:33:96.32:1341,96,0	1/1:0,14:14:39.13:539,39,0	1/1:0,12:12:33.11:454,33,0	1/1:0,74:74:99:2722,196,0	1/1:0,10:10:27.09:377,27,0	1/1:0,9:9:24.08:335,24,0	1/1:0,45:45:99:1611,117,0	0/0:20,0:20:60.19:0,60,935	1/1:0,30:30:90.27:1235,90,0	1/1:0,25:25:75.25:1045,75,0	1/1:0,11:11:30.10:418,30,0
chr10	109870252	.	CAG	C	4180.88	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.060;DP=421;FS=1.414;HRun=0;HaplotypeScore=59.6128;InbreedingCoeff=0.9352;MQ=77.59;MQ0=0;MQRankSum=-2.526;QD=43.55;ReadPosRankSum=0.148;VQSLOD=5.0993;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1887	0/0:3,0:3:6.02:0,6,116	0/0:12,0:12:36.12:0,36,686	0/0:8,0:8:21.06:0,21,364	1/1:0,12:12:33.11:505,33,0	1/1:0,9:9:27.09:413,27,0	1/1:1,35:36:99:1516,99,0	0/0:10,0:10:27.09:0,27,521	1/1:0,11:11:33.11:505,33,0	0/0:15,0:15:42.14:0,42,781	0/0:4,0:4:12.04:0,12,218	0/0:16,0:16:48.16:0,48,915	0/0:4,0:4:12.04:0,12,223	0/0:14,0:14:39.13:0,39,740	0/0:6,0:6:18.06:0,18,344	0/0:6,0:6:18.06:0,18,348	0/0:37,0:37:99:0,105,1995	0/0:27,0:27:78.27:0,78,1488	0/0:17,0:17:48.15:0,48,866	0/0:6,0:6:18.06:0,18,348	0/0:48,0:48:99:0,138,2663	0/0:4,0:4:12.04:0,12,232	0/0:4,0:4:12.04:0,12,232	0/0:22,0:22:66.23:0,66,1275	1/1:0,28:28:81.28:1241,81,0	0/0:12,0:12:33.11:0,33,638	0/0:10,0:10:30.10:0,30,579	0/0:5,0:5:12.04:0,12,231
chr10	109870385	.	CCGG	C	5175.27	PASS	AB=1.000;AC=35;AF=0.833;AN=42;BaseQRankSum=-1.289;DP=310;FS=0.000;HRun=0;HaplotypeScore=46.6070;InbreedingCoeff=0.4209;MQ=71.77;MQ0=0;MQRankSum=-0.579;QD=19.17;ReadPosRankSum=3.190;VQSLOD=3.9568;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,3:19:8.32:130,8,0	./.	./.	0/0:7,0:7:1.55:0,2,4	./.	1/1:2,1:3:3.01:44,3,0	1/1:12,20:32:48.16:698,48,0	1/1:6,1:7:3.01:44,3,0	1/1:3,2:5:6.02:87,6,0	0/0:11,0:11:3.48:0,3,62	./.	1/1:3,9:12:26.88:392,27,0	1/1:4,2:6:6.02:87,6,0	1/1:12,6:18:15.05:218,15,0	1/1:2,3:5:3.01:44,3,0	0/0:3,0:3:6.02:0,6,86	1/1:6,26:32:72.24:1047,72,0	1/1:9,27:36:81.27:1178,81,0	1/1:8,2:10:5.99:50,6,0	1/1:4,0:4:6:67,6,0	1/1:31,6:37:2.62:43,3,0	0/1:3,0:3:0:0,0,0	./.	1/1:4,24:28:59.86:873,60,0	1/1:9,1:10:3.01:44,3,0	./.	1/1:0,3:3:9.03:131,9,0	./.
chr10	109873335	.	T	TC	2570.16	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=7.500;DP=274;FS=2.905;HRun=1;HaplotypeScore=70.7526;InbreedingCoeff=0.8804;MQ=51.93;MQ0=12;MQRankSum=-3.202;QD=13.60;ReadPosRankSum=0.821;VQSLOD=2.8021;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,4:13:29.61:251,30,0	0/0:6,0:6:13.78:0,14,114	0/0:4,0:2:5.21:0,5,22	0/0:12,0:7:7.57:0,8,35	0/0:13,0:13:23.85:0,24,191	0/1:9,0:9:3.97:4,0,104	0/0:10,0:9:14.79:0,15,104	1/1:10,4:11:19.17:141,19,0	0/0:7,0:7:14.90:0,15,111	0/0:6,0:6:17.48:0,17,149	0/0:10,0:9:14.97:0,15,130	1/1:9,0:8:20.69:158,21,0	1/1:6,0:6:14.53:95,15,0	1/1:15,0:13:29.19:194,29,0	1/1:12,0:12:29.45:184,29,0	0/0:9,0:9:21:0,21,183	1/1:8,5:13:32.72:255,33,0	1/1:9,1:10:26.91:222,27,0	1/1:11,2:11:23.87:191,24,0	1/1:11,2:13:26.87:212,27,0	1/1:3,3:6:11.92:97,12,0	1/1:7,0:7:14.48:93,14,0	1/1:9,0:9:22.54:138,23,0	1/1:7,0:6:10.92:63,11,0	0/0:8,0:7:15.03:0,15,157	1/1:12,0:10:23.99:213,24,0	1/1:12,2:14:22.90:163,23,0	1/1:6,1:5:14.88:111,15,0
chr10	109873352	.	A	AC	1002.78	PASS	AB=0.818;AC=16;AF=0.286;AN=56;BaseQRankSum=5.012;DP=306;FS=10.690;HRun=0;HaplotypeScore=71.8154;InbreedingCoeff=0.5486;MQ=59.48;MQ0=9;MQRankSum=-6.269;QD=8.43;ReadPosRankSum=4.053;VQSLOD=2.9804;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,5:17:1.06:177,1,0	0/0:7,0:7:20.30:0,20,163	0/0:10,0:6:11.08:0,11,117	0/0:21,0:13:23.52:0,24,186	0/0:9,0:9:23.25:0,23,179	0/0:16,0:16:43.85:0,44,350	0/0:14,0:13:38.36:0,38,309	0/1:16,4:17:41.11:84,0,41	0/0:3,0:3:8.94:0,9,67	0/0:11,0:11:25.16:0,25,202	0/0:6,0:6:14.97:0,15,129	0/0:8,0:8:23.84:0,24,189	0/0:9,0:11:27.34:0,27,215	0/0:4,0:9:7.56:0,8,37	0/0:8,0:11:29.27:0,29,203	0/0:6,0:6:15.09:0,15,110	1/1:8,8:16:13.35:197,13,0	1/1:11,2:13:36.68:205,37,0	1/1:8,3:9:18.26:107,18,0	0/1:8,3:11:18.13:78,0,18	1/1:0,3:3:3.86:35,4,0	0/0:5,0:8:7.25:0,7,149	0/0:9,0:13:35.49:0,35,259	0/0:8,0:10:17.45:0,17,133	0/0:10,0:9:22.94:0,23,184	0/1:7,2:7:6.63:57,0,7	1/1:10,4:14:19.72:231,20,0	0/1:4,1:3:11.51:12,0,32
chr10	109873356	.	AGC	A	2323.98	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=7.241;DP=286;FS=37.211;HRun=0;HaplotypeScore=69.3584;InbreedingCoeff=0.8023;MQ=61.88;MQ0=4;MQRankSum=-7.595;QD=12.70;ReadPosRankSum=-0.062;VQSLOD=1.3912;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,1:15:44.84:452,45,0	0/0:6,0:6:18.06:0,18,244	0/0:11,0:6:17.09:0,17,192	0/0:22,0:14:10.96:0,11,310	0/0:8,0:8:17.95:0,18,229	0/0:13,0:13:35.92:0,36,500	0/0:11,0:11:29.90:0,30,429	1/1:13,2:13:28.60:254,29,0	0/1:3,0:3:3.78:4,0,69	0/0:12,0:12:29.48:0,29,417	0/0:5,0:5:12.03:0,12,179	1/1:9,0:8:4.12:15,4,0	1/1:12,0:12:7.19:39,7,0	1/1:10,0:8:5.75:30,6,0	1/1:10,0:10:14.02:57,14,0	0/0:6,0:6:10.93:0,11,168	1/1:14,2:16:35.92:280,36,0	1/1:11,2:13:38.89:391,39,0	1/1:9,2:9:21.76:209,22,0	1/1:8,1:9:8.09:170,8,0	1/1:4,0:4:11.74:90,12,0	1/1:11,0:11:8.71:38,9,0	1/1:12,0:12:11.68:45,12,0	1/1:11,0:10:4.18:16,4,0	0/0:9,0:9:24.08:0,24,318	1/1:6,3:7:15.32:146,15,0	1/1:9,3:12:32.72:276,33,0	1/1:1,0:1:2.97:20,3,0
chr10	109873990	.	AC	A	16852.68	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=10.147;DP=750;FS=0.951;HRun=4;HaplotypeScore=76.2970;InbreedingCoeff=0.9986;MQ=81.46;MQ0=0;MQRankSum=-3.588;QD=32.22;ReadPosRankSum=3.938;VQSLOD=5.3946;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,51:53:99:1690,141,0	0/0:11,0:11:27.03:0,27,334	0/0:25,0:25:53.83:0,54,671	0/0:13,0:13:36.09:0,36,445	0/0:13,0:13:33.09:0,33,461	0/0:22,0:22:66.21:0,66,906	0/0:33,0:33:99:0,99,1331	1/1:3,17:20:48.13:563,48,0	0/0:26,0:26:75.25:0,75,1050	0/0:14,0:14:42.13:0,42,560	0/0:15,0:15:41.80:0,42,570	1/1:4,43:47:99:1440,120,0	1/1:1,34:35:99:1209,102,0	1/1:0,37:37:99:1296,108,0	1/1:2,36:38:99:1187,99,0	0/0:40,0:40:99:0,114,1564	1/1:1,38:39:99:1368,114,0	1/1:0,17:17:48.15:576,48,0	1/1:2,24:26:69.18:804,69,0	1/1:0,11:11:33.10:396,33,0	1/1:2,70:72:99:2231,187,0	1/1:2,19:21:57.17:684,57,0	1/1:3,12:15:36.11:430,36,0	1/1:0,35:35:96.29:1152,96,0	0/0:15,0:15:45.13:0,45,587	1/1:1,32:33:54.45:1071,54,0	1/1:2,16:18:45.14:540,45,0	1/1:0,6:6:18.06:216,18,0
chr10	109875442	.	GGGGTGATACCA	G	35225.53	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=20.152;DP=724;FS=2.387;HRun=0;HaplotypeScore=272.2411;InbreedingCoeff=0.9973;MQ=82.98;MQ0=0;MQRankSum=-20.053;QD=81.92;ReadPosRankSum=0.668;VQSLOD=4.5334;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:96.33:3383,96,0	0/0:10,0:10:30.10:0,30,1541	0/0:31,0:31:86.99:0,87,3963	0/0:26,0:26:78.25:0,78,3927	0/0:24,0:24:72.25:0,72,4012	0/0:14,0:13:42.13:0,42,2062	0/0:27,0:27:81.28:0,81,4371	1/1:2,23:25:69.19:2010,69,0	0/0:32,0:32:96.33:0,96,5193	0/0:34,0:34:99:0,102,5139	0/0:19,0:19:57.20:0,57,3004	1/1:4,31:35:78.27:2781,78,0	1/1:2,22:24:63.22:2245,63,0	1/1:0,27:27:72.25:2565,72,0	1/1:1,36:37:99:3465,99,0	0/0:47,0:47:99:0,141,7352	1/1:4,15:19:39.13:1390,39,0	1/1:2,13:15:33.11:1176,33,0	1/1:6,18:24:54.05:1537,54,0	1/1:1,23:24:60.16:2053,60,0	1/1:4,20:24:45.15:1426,45,0	1/1:4,27:31:78.27:2760,78,0	1/1:3,22:25:50.84:1694,51,0	1/1:3,15:18:23.93:763,24,0	0/0:30,0:30:90.30:0,90,4777	1/1:0,25:25:72.25:2559,72,0	1/1:4,28:32:81.28:2884,81,0	1/1:0,7:7:15.05:535,15,0
chr10	109877381	.	GA	G	7991.04	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=-0.399;DP=537;FS=8.024;HRun=1;HaplotypeScore=72.1031;InbreedingCoeff=0.8377;MQ=73.45;MQ0=0;MQRankSum=-2.824;QD=22.64;ReadPosRankSum=1.182;VQSLOD=4.3323;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:40:99:1381,99,0	0/0:7,0:7:18.06:0,18,269	0/0:12,0:11:30.98:0,31,423	0/0:11,0:11:20.72:0,21,351	1/1:15,0:15:10.30:94,10,0	1/1:17,1:18:36.58:140,37,0	1/1:32,1:33:41.87:199,42,0	1/1:1,13:14:30.09:402,30,0	1/1:26,0:26:52.84:190,53,0	0/0:19,0:19:45.14:0,45,675	0/0:16,0:16:45.15:0,45,669	0/0:28,0:28:33.98:0,34,241	0/0:17,0:17:12.62:0,13,115	0/1:18,0:18:4.85:5,0,103	0/0:14,0:14:10.14:0,10,100	0/0:34,0:34:99:0,99,1400	1/1:2,21:23:60.12:794,60,0	1/1:0,22:22:57.19:796,57,0	1/1:0,13:13:38.98:442,39,0	1/1:0,10:10:24.04:307,24,0	1/1:0,36:36:96.32:1339,96,0	0/1:14,0:14:51.33:73,0,51	0/0:12,0:12:11.56:0,12,92	0/0:14,0:14:8.37:0,8,97	1/1:21,0:21:20.67:108,21,0	1/1:0,16:16:48.13:634,48,0	1/1:0,26:26:60.20:836,60,0	1/1:0,8:8:18.06:251,18,0
chr10	109877382	.	AG	A	5716.56	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=4.996;DP=543;FS=11.141;HRun=6;HaplotypeScore=82.0628;InbreedingCoeff=0.8552;MQ=72.38;MQ0=0;MQRankSum=-1.287;QD=17.38;ReadPosRankSum=4.117;VQSLOD=3.6491;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:40:95.92:533,96,0	0/0:7,0:7:21.05:0,21,261	0/0:12,0:11:33.03:0,33,393	0/0:10,0:10:22.31:0,22,271	1/1:3,13:16:42.09:443,42,0	1/1:1,17:18:48.12:515,48,0	1/1:2,30:32:84.21:902,84,0	0/1:17,0:17:67.73:87,0,68	1/1:0,26:26:69.17:741,69,0	0/0:19,0:19:51.14:0,51,644	0/0:16,0:16:48.15:0,48,613	0/0:28,0:28:81.21:0,81,977	0/0:17,0:17:48.12:0,48,575	0/0:18,0:18:48.12:0,48,575	0/0:15,0:15:42.12:0,42,521	0/0:32,0:32:93.29:0,93,1210	1/1:23,0:23:52.15:285,52,0	1/1:24,0:24:32.76:256,33,0	1/1:13,0:13:23.08:138,23,0	1/1:10,0:10:20.42:126,20,0	1/1:37,0:37:92.55:499,93,0	0/0:13,0:13:29.92:0,30,345	0/0:12,0:12:33.11:0,33,418	0/0:15,0:15:42.10:0,42,499	1/1:1,20:21:54.14:580,54,0	1/1:16,0:16:40.03:203,40,0	1/1:26,0:26:58.34:333,58,0	0/1:10,0:10:24.18:74,0,24
chr10	109877620	.	C	CTA	13857.53	PASS	AB=0.593;AC=33;AF=0.589;AN=56;BaseQRankSum=-6.605;DP=422;FS=1.358;HRun=0;HaplotypeScore=51.0572;InbreedingCoeff=0.8740;MQ=87.54;MQ0=0;MQRankSum=-6.949;QD=47.62;ReadPosRankSum=3.949;VQSLOD=6.0729;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:30:72.25:1387,72,0	0/0:4,0:4:12.02:0,12,162	0/0:9,0:9:23.94:0,24,248	0/0:19,0:19:51.01:0,51,631	0/0:3,0:3:9.03:0,9,138	0/0:16,0:16:48.12:0,48,665	0/0:25,0:25:75.23:0,75,1102	1/1:2,15:17:45.13:770,45,0	0/0:7,0:7:21.07:0,21,321	0/0:13,0:13:33.11:0,33,487	0/0:7,0:7:21.06:0,21,293	1/1:1,17:18:51.17:984,51,0	1/1:0,15:15:42.14:809,42,0	1/1:0,13:13:30.10:579,30,0	1/1:1,16:17:45.15:869,45,0	0/0:16,0:16:48.15:0,48,713	1/1:1,38:39:90.31:1734,90,0	1/1:2,19:21:54.19:1028,54,0	1/1:1,20:21:60.16:1081,60,0	1/1:0,2:2:6.02:115,6,0	1/1:1,30:31:75.26:1447,75,0	1/1:1,7:9:21.07:400,21,0	1/1:0,3:3:6.02:116,6,0	1/1:0,25:25:72.25:1389,72,0	0/0:12,0:12:33.10:0,33,482	0/1:5,11:16:95.70:521,0,96	1/1:1,7:8:24.08:455,24,0	1/1:0,6:6:9.03:174,9,0
chr10	109879752	.	C	CCAT	22326.71	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-8.405;DP=902;FS=0.534;HRun=0;HaplotypeScore=129.4414;InbreedingCoeff=0.9994;MQ=72.57;MQ0=0;MQRankSum=-4.239;QD=53.80;ReadPosRankSum=3.060;VQSLOD=7.0277;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,2248	0/0:15,0:15:39.13:0,39,661	0/0:26,0:26:75.18:0,75,1166	0/0:26,0:26:45.32:0,45,1015	1/1:4,28:33:75.26:1728,75,0	1/1:1,21:22:39.13:898,39,0	1/1:3,25:29:66.23:1476,66,0	0/0:38,0:38:99:0,108,1753	1/1:0,34:34:93.32:2143,93,0	0/0:32,0:32:96.33:0,96,1630	0/0:24,0:24:72.23:0,72,1200	1/1:2,58:60:99:3662,160,0	1/1:7,24:33:81.28:1757,81,0	1/1:0,24:24:66.23:1521,66,0	1/1:2,48:51:99:2767,123,0	0/0:50,0:50:99:0,144,2389	0/0:33,0:33:99:0,99,1677	0/0:23,0:23:66.19:0,66,1095	0/0:24,0:24:69.19:0,69,1104	0/0:20,0:20:57.19:0,57,948	0/0:50,0:50:99:0,147,2477	1/1:2,26:31:63.22:1440,63,0	1/1:2,15:17:45.15:1034,45,0	1/1:2,40:42:93.32:2107,93,0	1/1:5,32:38:78.27:1794,78,0	0/0:48,0:48:99:0,144,2430	0/0:23,0:23:69.24:0,69,1172	0/0:8,0:8:21.07:0,21,358
chr10	109882154	.	AC	A	10436.82	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=12.613;DP=683;FS=0.000;HRun=2;HaplotypeScore=74.8114;InbreedingCoeff=0.9973;MQ=85.76;MQ0=0;MQRankSum=-1.847;QD=37.01;ReadPosRankSum=5.822;VQSLOD=5.0024;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,2023	0/0:8,0:8:24.06:0,24,351	0/0:23,0:23:47.11:0,47,957	0/0:23,1:24:66.17:0,66,937	1/1:0,14:14:39.13:539,39,0	1/1:0,31:31:90.30:1258,90,0	1/1:0,28:28:78.26:1090,78,0	0/0:30,0:30:87.27:0,87,1299	1/1:0,18:18:42.14:587,42,0	0/0:23,0:23:69.22:0,69,1059	0/0:21,0:21:63.21:0,63,966	1/1:0,23:23:60.20:839,60,0	1/1:0,12:12:27.56:378,28,0	1/1:0,28:28:72.70:1007,73,0	1/1:0,24:24:60.20:839,60,0	0/0:33,0:33:99:0,99,1478	0/0:27,1:28:42.40:0,42,1190	0/0:18,1:19:15.32:0,15,749	0/0:22,0:22:60.19:0,60,939	0/0:23,0:23:66.12:0,66,891	0/0:37,0:37:99:0,105,1589	1/1:0,11:11:27.09:378,27,0	1/1:0,27:27:72.24:1006,72,0	1/1:0,33:33:96.32:1342,96,0	1/1:0,33:33:84.28:1174,84,0	0/0:28,0:28:84.26:0,84,1270	0/0:27,0:24:81.21:0,81,1206	0/0:11,0:11:33.11:0,33,515
chr10	109882299	.	G	GGT	16315.26	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-18.386;DP=743;FS=16.255;HRun=0;HaplotypeScore=82.8846;InbreedingCoeff=0.9997;MQ=72.26;MQ0=0;MQRankSum=-0.055;QD=48.99;ReadPosRankSum=2.896;VQSLOD=4.5385;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,2094	0/0:11,0:11:33.11:0,33,482	0/0:24,0:24:69.02:0,69,982	0/0:18,0:18:27.06:0,27,643	1/1:2,24:26:72.25:1349,72,0	1/1:2,25:27:69.24:1292,69,0	1/1:1,29:31:75.26:1404,75,0	0/0:23,0:23:69.22:0,69,995	1/1:2,24:26:69.24:1275,69,0	0/0:32,0:32:87.29:0,87,1265	0/0:14,0:14:39.13:0,39,571	1/1:2,26:28:78.27:1461,78,0	1/1:2,31:34:96.33:1780,96,0	1/1:2,37:39:99:1975,108,0	1/1:4,24:28:69.24:1292,69,0	0/0:35,1:36:43.10:0,43,1319	0/0:34,0:34:99:0,102,1491	0/0:40,0:40:99:0,114,1658	0/0:14,0:14:39.12:0,39,553	0/0:16,0:16:48.16:0,48,703	0/0:28,0:28:84.28:0,84,1237	1/1:1,18:19:42.14:786,42,0	1/1:1,11:13:30.10:556,30,0	1/1:0,27:27:72.25:1348,72,0	1/1:1,33:35:96.33:1798,96,0	0/0:29,0:29:78.26:0,78,1145	0/0:29,0:29:84.28:0,84,1231	0/0:13,0:13:39.13:0,39,574
chr10	109886246	.	A	AG	18845.93	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=6.506;DP=683;FS=7.245;HRun=4;HaplotypeScore=108.9340;InbreedingCoeff=0.9784;MQ=85.25;MQ0=0;MQRankSum=-5.847;QD=34.39;ReadPosRankSum=4.049;VQSLOD=4.3939;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,45:48:99:1682,123,0	0/0:14,0:14:30.08:0,30,336	0/0:17,0:18:46.93:0,47,572	0/0:25,0:25:59.51:0,60,673	1/1:0,10:10:24.08:328,24,0	1/1:1,24:25:63.21:862,63,0	1/1:0,23:23:63.21:862,63,0	1/1:4,32:36:96.31:1297,96,0	1/1:1,22:23:57.19:780,57,0	0/0:31,0:31:93.27:0,93,1055	0/0:19,0:19:48.14:0,48,544	1/1:1,19:20:57.19:776,57,0	1/1:4,13:17:33.10:451,33,0	1/1:1,23:24:60.20:821,60,0	1/1:2,37:39:99:1332,99,0	0/0:28,0:28:84.24:0,84,953	1/1:4,29:33:78.26:1067,78,0	1/1:0,33:33:90.30:1231,90,0	1/1:1,22:23:63.14:821,63,0	1/1:2,13:15:36.08:471,36,0	1/1:5,29:34:75.25:1026,75,0	1/1:0,22:22:54.18:739,54,0	1/1:2,19:21:51.04:697,51,0	1/1:2,22:24:60.20:821,60,0	1/1:1,19:20:39.13:532,39,0	1/1:0,28:28:84.28:1144,84,0	1/1:4,24:28:75.25:1023,75,0	1/1:0,2:2:6.02:82,6,0
chr10	109887425	.	GAGAT	G	1748.48	PASS	AB=0.891;AC=22;AF=0.423;AN=52;BaseQRankSum=5.932;DP=655;FS=7.830;HRun=0;HaplotypeScore=139.7049;InbreedingCoeff=0.5378;MQ=64.42;MQ0=4;MQRankSum=0.671;QD=6.99;ReadPosRankSum=4.427;VQSLOD=1.7091;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,7:30:12.04:183,12,0	0/0:6,0:11:3.48:0,3,47	./.	./.	1/1:21,2:21:8.93:137,9,0	1/1:8,3:11:9.02:116,9,0	1/1:18,2:19:2.48:129,2,0	0/0:35,0:33:0:0,0,0	0/0:26,0:24:9.50:0,10,203	0/0:36,0:36:36.12:0,36,733	0/0:22,0:22:27.09:0,27,627	0/0:25,0:26:16.95:0,17,479	0/0:25,0:25:27.09:0,27,622	0/0:25,0:25:27.07:0,27,556	0/0:39,0:39:57.20:0,57,1317	0/0:56,0:56:99:0,99,2252	0/1:15,2:15:26.92:37,0,27	0/1:11,2:13:29.10:78,0,29	1/1:14,0:14:6.02:91,6,0	1/1:14,1:14:3:46,3,0	1/1:22,2:24:12.03:157,12,0	0/0:23,0:23:21.07:0,21,483	0/0:16,0:16:18.06:0,18,370	1/1:13,11:24:24.08:366,24,0	0/0:24,0:23:21.07:0,21,476	0/1:25,3:28:4.57:253,0,5	0/1:24,3:27:33.03:207,0,33	1/1:3,1:4:9.03:130,9,0
chr10	109887465	.	TA	T	574.70	PASS	AB=0.877;AC=5;AF=0.096;AN=52;BaseQRankSum=5.679;DP=646;FS=3.992;HRun=1;HaplotypeScore=140.3653;InbreedingCoeff=-0.1123;MQ=47.55;MQ0=13;MQRankSum=-4.729;QD=5.47;ReadPosRankSum=0.419;VQSLOD=0.5670;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:25:18.49:0,18,199	0/0:15,0:15:24.08:0,24,358	./.	./.	0/0:30,0:25:9.97:0,10,104	0/0:9,0:9:7.03:0,7,36	0/0:18,0:17:15.52:0,16,230	0/1:25,14:36:99:473,0,821	0/0:24,0:16:17.73:0,18,248	0/0:32,0:32:96.32:0,96,1434	0/0:23,0:23:63.21:0,63,975	0/0:18,0:18:51.17:0,51,777	0/0:31,0:31:81.26:0,81,1221	0/0:24,0:24:72.24:0,72,1096	0/0:45,0:45:99:0,126,1896	0/0:59,0:58:99:0,169,2582	0/1:22,1:22:31.97:32,0,254	0/1:10,2:12:55.14:55,0,197	0/1:11,0:9:4.71:5,0,58	0/0:13,0:13:13.39:0,13,187	0/0:14,0:13:9.16:0,9,83	0/0:24,0:23:66.22:0,66,1003	0/0:22,0:21:60.19:0,60,889	0/0:19,0:19:27.18:0,27,259	0/0:42,0:28:29.83:0,30,472	0/1:16,4:20:99:121,0,373	0/0:20,0:18:17.12:0,17,196	0/0:11,0:11:18.81:0,19,214
chr10	109887466	.	AGATAGATAGATAGATGATAGATT	A	4309.04	PASS	AB=1.000;AC=23;AF=0.442;AN=52;BaseQRankSum=6.758;DP=646;FS=0.000;HRun=0;HaplotypeScore=346.9710;InbreedingCoeff=0.5168;MQ=47.44;MQ0=13;MQRankSum=-6.683;QD=16.20;ReadPosRankSum=-2.653;VQSLOD=1.9791;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:24:10.44:281,10,0	0/0:15,0:15:22.32:0,22,716	./.	./.	1/1:29,0:24:1.62:126,2,0	1/1:10,0:10:8.86:97,9,0	0/1:18,0:17:61.60:92,0,62	1/1:39,0:36:39.93:478,40,0	0/0:25,0:17:4.72:0,5,250	0/0:31,0:31:84.28:0,84,2374	0/0:23,0:23:54.59:0,55,1691	0/0:19,0:19:43.35:0,43,1210	0/0:29,0:29:75.18:0,75,2423	0/0:25,0:25:72.22:0,72,2135	0/0:45,0:45:99:0,111,3678	0/0:59,0:58:99:0,163,5403	0/1:23,0:22:99:130,0,410	0/1:12,0:12:16.29:328,0,16	1/1:2,9:9:26.99:521,27,0	1/1:12,0:13:2.86:46,3,0	1/1:14,0:13:12.03:182,12,0	0/0:24,0:23:51.18:0,51,1581	0/0:22,0:21:51.17:0,51,1702	0/1:19,0:19:9.37:9,0,567	0/0:43,0:29:24.53:0,25,638	1/1:21,0:21:48.16:929,48,0	1/1:17,0:16:26.11:707,26,0	0/1:11,0:11:99:383,0,178
chr10	109887478	.	AGATGATAGATT	A	1795.62	PASS	AB=1.000;AC=16;AF=0.296;AN=54;BaseQRankSum=8.632;DP=644;FS=0.504;HRun=0;HaplotypeScore=218.0434;InbreedingCoeff=0.4752;MQ=46.18;MQ0=15;MQRankSum=-4.665;QD=10.62;ReadPosRankSum=-4.233;VQSLOD=0.9741;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:22:6.35:42,6,0	0/0:16,0:16:22.32:0,22,576	0/0:18,0:2:5.97:0,6,90	./.	0/1:35,0:23:2.88:3,0,3	0/0:10,0:10:0.33:0,0,13	0/1:12,0:11:13.76:14,0,79	0/0:30,0:29:19.75:0,20,100	0/0:22,0:14:0.82:0,1,159	0/0:29,0:29:80.96:0,81,2387	0/0:21,0:21:60.14:0,60,1853	0/0:19,0:19:35.34:0,35,1310	0/0:33,0:33:96.23:0,96,2772	0/0:26,0:26:75.26:0,75,2030	0/0:43,0:43:99:0,120,4213	0/0:66,0:65:99:0,185,5907	0/0:22,0:21:7.85:0,8,193	1/1:14,0:14:5.10:251,5,0	1/1:13,0:9:24.45:366,24,0	1/1:2,8:10:1.52:4,2,0	1/1:12,0:11:2.61:9,3,0	0/0:20,0:19:54.08:0,54,1329	0/0:22,0:21:54.15:0,54,1426	0/0:19,0:19:36.09:0,36,923	0/0:48,0:29:24.05:0,24,430	0/1:18,0:18:25.68:545,0,26	1/1:18,0:16:22.97:490,23,0	0/1:11,0:11:46.93:231,0,47
chr10	109887485	.	AGATT	A	845.80	PASS	AB=0.969;AC=12;AF=0.214;AN=56;BaseQRankSum=9.413;DP=642;FS=2.633;HRun=0;HaplotypeScore=153.3576;InbreedingCoeff=0.1195;MQ=45.51;MQ0=17;MQRankSum=-6.724;QD=5.56;ReadPosRankSum=-2.732;VQSLOD=2.0760;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,1:24:10.75:85,0,11	0/0:14,0:14:21.54:0,22,568	0/0:23,0:2:5.89:0,6,96	0/0:13,0:1:3.01:0,3,81	0/0:35,0:22:2.27:0,2,8	0/1:9,0:9:8.88:9,0,20	0/0:10,0:8:13.65:0,14,127	0/1:17,0:16:15.96:16,0,68	0/0:24,0:16:8.72:0,9,60	0/0:32,0:32:93.31:0,93,2295	0/0:22,0:22:63.04:0,63,1355	0/0:19,0:19:46.54:0,47,1204	0/0:32,0:32:93.22:0,93,2247	0/0:27,0:27:81.24:0,81,1955	0/0:46,0:46:99:0,129,3364	0/0:65,0:64:99:0,184,4653	0/0:19,2:19:18.52:0,19,345	0/1:12,1:13:30.95:108,0,31	1/1:13,0:9:1.03:182,1,0	0/1:10,0:10:0:0,0,0	1/1:8,1:8:3:25,3,0	0/0:21,0:20:57.16:0,57,1317	0/0:21,0:20:57.12:0,57,1311	0/0:19,0:19:36.09:0,36,781	0/0:46,0:27:18.03:0,18,249	0/1:17,2:19:99:254,0,243	0/1:19,1:17:3.83:234,0,4	0/1:14,0:14:70.78:71,0,107
chr10	109887488	.	TTGATAGATAGA	T	296.46	PASS	AB=0.952;AC=10;AF=0.179;AN=56;BaseQRankSum=6.187;DP=631;FS=28.412;HRun=0;HaplotypeScore=210.9446;InbreedingCoeff=0.4148;MQ=45.49;MQ0=18;MQRankSum=-5.131;QD=1.95;ReadPosRankSum=-3.234;VQSLOD=0.5969;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:23:2.40:0,2,17	0/0:13,0:13:22.32:0,22,1060	0/0:24,0:2:6.02:0,6,158	0/0:13,0:1:3.01:0,3,106	1/1:31,3:21:10.15:71,10,0	1/1:8,1:9:5.25:41,5,0	0/0:9,0:8:5.33:0,5,40	0/0:12,0:11:15.05:0,15,328	1/1:16,7:15:17.86:171,18,0	0/0:32,0:32:87.30:0,87,3473	0/0:23,0:23:51.16:0,51,1830	0/0:19,0:19:35.94:0,36,1795	0/0:32,0:32:81.28:0,81,3594	0/0:28,0:28:69.22:0,69,3173	0/0:46,0:46:99:0,123,4729	0/0:64,0:63:99:0,160,6264	0/0:22,0:20:21:0,21,557	0/0:11,0:11:13.24:0,13,238	0/0:13,0:9:14.24:0,14,171	0/0:11,0:10:2.88:0,3,61	0/1:8,0:7:0.38:0,0,0	0/0:21,0:20:45.15:0,45,1939	0/0:21,0:20:51.18:0,51,2165	0/0:20,0:20:30.09:0,30,1050	0/1:35,11:27:82.69:83,0,95	0/0:18,0:18:48.26:0,48,676	0/1:19,0:16:52.67:53,0,125	0/1:13,0:13:21.94:22,0,451
chr10	109887496	.	TAGA	T	133.33	PASS	AB=0.953;AC=7;AF=0.125;AN=56;BaseQRankSum=6.360;DP=649;FS=31.929;HRun=0;HaplotypeScore=148.9154;InbreedingCoeff=0.4259;MQ=45.17;MQ0=17;MQRankSum=-5.332;QD=1.08;ReadPosRankSum=-4.408;VQSLOD=-0.4668;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:19:5.69:0,6,55	0/0:13,0:13:23.94:0,24,581	0/0:27,0:2:6.02:0,6,146	0/0:15,0:1:3.01:0,3,74	1/1:34,0:21:11.18:76,11,0	0/1:9,0:9:5.10:10,0,5	0/1:8,1:8:14.18:14,0,67	0/0:13,0:11:30.10:0,30,534	1/1:23,1:16:19.14:124,19,0	0/0:32,0:32:96.31:0,96,2227	0/0:21,0:21:54.18:0,54,1198	0/0:19,0:19:54.63:0,55,1177	0/0:30,0:30:87.27:0,87,2033	0/0:26,0:26:78.26:0,78,1805	0/0:50,0:50:99:0,141,3248	0/0:65,0:64:99:0,190,4156	0/0:23,0:21:4.01:0,4,481	0/0:12,0:12:15.94:0,16,245	0/0:16,0:13:34.35:0,34,522	0/0:14,0:12:2.72:0,3,39	0/0:8,0:7:0:0,0,0	0/0:23,0:22:63.20:0,63,1400	0/0:22,0:21:60.16:0,60,1368	0/0:18,0:18:33.10:0,33,714	0/1:45,2:28:42.46:42,0,106	0/0:18,0:18:50.29:0,50,834	0/0:22,0:19:27.11:0,27,483	0/0:13,0:14:26.68:0,27,508
chr10	109887534	.	T	TGATA	7125.70	PASS	AB=0.673;AC=29;AF=0.558;AN=52;BaseQRankSum=-3.701;DP=685;FS=4.432;HRun=0;HaplotypeScore=167.5235;InbreedingCoeff=0.5808;MQ=47.01;MQ0=26;MQRankSum=-1.220;QD=17.59;ReadPosRankSum=-4.415;VQSLOD=3.6366;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:23,10:31:39.11:865,39,0	1/1:9,1:10:9.03:198,9,0	./.	./.	1/1:10,0:17:12.45:121,12,0	0/0:3,0:12:0.80:0,1,2	1/1:8,0:7:2.54:43,3,0	1/1:41,0:32:15.04:223,15,0	0/1:9,0:13:2.59:14,0,3	1/1:20,8:28:30.06:630,30,0	1/1:11,8:19:18.06:424,18,0	0/0:23,0:23:39.13:0,39,599	0/0:29,0:30:42.08:0,42,575	0/0:32,0:32:45.15:0,45,699	0/0:40,0:40:63.01:0,63,913	0/0:53,0:53:78.23:0,78,1159	1/1:15,0:17:5:44,5,0	1/1:11,2:15:14.87:246,15,0	0/1:11,5:14:17.60:403,0,18	1/1:14,10:21:32.49:814,32,0	0/1:7,8:14:63.10:510,0,63	0/0:23,0:22:33.10:0,33,491	0/0:20,0:20:24.05:0,24,373	0/0:13,0:13:15.02:0,15,233	0/1:22,0:28:3.20:14,0,3	1/1:20,3:23:30.09:623,30,0	1/1:23,8:28:51.17:1148,51,0	0/1:12,19:31:7.47:808,0,7
chr10	109887642	.	C	CAT	4656.67	PASS	AB=0.855;AC=27;AF=0.482;AN=56;BaseQRankSum=-1.018;DP=688;FS=5.441;HRun=0;HaplotypeScore=157.6432;InbreedingCoeff=0.7391;MQ=51.97;MQ0=36;MQRankSum=-4.109;QD=14.55;ReadPosRankSum=-3.153;VQSLOD=3.9802;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,24:27:7.63:184,0,8	0/0:7,0:7:15.05:0,15,200	0/0:26,0:8:6.02:0,6,80	0/0:39,0:13:8.47:0,8,128	1/1:12,0:12:6.02:84,6,0	0/1:14,0:13:3.10:19,0,3	1/1:15,0:14:5.69:53,6,0	1/1:32,2:30:53.87:645,54,0	1/1:13,0:10:1.05:136,1,0	0/0:34,0:34:96.30:0,96,1253	0/0:20,0:20:48.14:0,48,623	0/0:26,0:26:42.74:0,43,241	0/0:25,0:25:40.29:0,40,224	0/0:33,0:33:29.01:0,29,241	0/0:36,0:36:39.62:0,40,318	0/0:54,0:54:99:0,138,1776	1/1:10,8:14:18.03:264,18,0	1/1:3,14:15:18.06:300,18,0	1/1:12,3:12:23.94:291,24,0	1/1:12,8:19:15.05:251,15,0	1/1:2,21:20:21.07:350,21,0	0/0:25,0:25:7.42:0,7,157	0/0:25,0:25:29.15:0,29,146	0/0:18,0:18:27.54:0,28,141	0/1:15,0:14:3.45:36,0,3	1/1:10,28:36:60.28:1191,60,0	1/1:5,23:26:24.01:401,24,0	1/1:8,18:21:27.09:452,27,0
chr10	109887648	.	TAC	T	3707.21	PASS	AB=0.804;AC=28;AF=0.500;AN=56;BaseQRankSum=7.252;DP=677;FS=5.581;HRun=0;HaplotypeScore=155.9093;InbreedingCoeff=0.0632;MQ=51.57;MQ0=39;MQRankSum=0.223;QD=8.04;ReadPosRankSum=-2.984;VQSLOD=2.2194;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:28:17.90:58,0,18	0/0:6,0:6:15.05:0,15,271	0/0:24,0:6:6.02:0,6,80	0/0:35,0:10:8.47:0,8,128	1/1:3,5:12:5.68:84,6,0	1/1:2,1:15:5.95:43,6,0	1/1:2,1:16:5.59:53,6,0	1/1:20,13:27:59.58:681,60,0	1/1:4,5:10:17.94:190,18,0	0/0:37,0:36:99:0,102,1644	0/0:21,0:21:43.62:0,44,832	0/1:16,11:27:99:217,0,151	0/1:15,11:26:99:247,0,104	0/1:16,14:30:99:338,0,109	0/1:18,17:35:99:361,0,197	0/0:54,0:54:99:0,134,2341	0/1:13,5:14:3.84:38,0,4	0/1:18,0:16:19.75:31,0,20	1/1:10,4:11:21.37:220,21,0	0/0:10,5:14:3.85:0,4,8	0/1:24,0:21:1.22:50,0,1	0/1:18,8:26:66.63:220,0,67	0/1:8,14:22:64.22:254,0,64	0/1:10,6:16:40.85:184,0,41	1/1:1,2:13:8.81:75,9,0	0/1:37,0:35:5.57:314,0,6	1/1:30,2:29:0.70:48,1,0	0/0:20,4:18:5.19:0,5,12
chr10	109887652	.	TAC	T	2890.57	PASS	AB=0.825;AC=22;AF=0.393;AN=56;BaseQRankSum=8.046;DP=670;FS=6.930;HRun=0;HaplotypeScore=158.5950;InbreedingCoeff=-0.0331;MQ=50.87;MQ0=40;MQRankSum=0.523;QD=7.45;ReadPosRankSum=1.236;VQSLOD=2.9436;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:27:5:5,0,136	0/0:7,0:7:15.05:0,15,272	0/0:21,0:4:6.02:0,6,86	0/0:32,0:7:2.20:0,2,80	1/1:13,0:13:5.68:84,6,0	1/1:15,0:14:5.95:43,6,0	1/1:16,0:15:5.59:53,6,0	0/1:32,0:25:98.56:477,0,99	1/1:12,0:10:1.39:145,1,0	0/0:35,0:34:99:0,99,1699	0/0:19,0:19:42.99:0,43,835	0/1:20,11:31:99:261,0,158	0/1:15,11:26:99:248,0,113	0/1:16,14:30:99:336,0,129	0/1:21,17:38:99:384,0,211	0/0:53,0:53:99:0,133,2401	0/1:19,0:15:26.71:27,0,127	0/0:18,0:16:22.36:0,22,178	0/1:12,0:9:76.27:105,0,76	0/0:17,0:16:20.17:0,20,161	0/0:25,0:22:34.77:0,35,254	0/1:17,8:25:75.58:220,0,76	0/1:8,14:22:71.37:254,0,71	0/1:9,6:15:45.66:183,0,46	1/1:13,0:13:7.21:64,7,0	0/1:37,0:35:99:172,0,446	0/0:32,0:29:19.37:0,19,206	0/0:23,0:17:26.68:0,27,180
chr10	109887672	.	TAC	T	61.74	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=13.623;DP=671;FS=0.899;HRun=0;HaplotypeScore=170.2622;InbreedingCoeff=0.5322;MQ=50.31;MQ0=23;MQRankSum=3.293;QD=0.56;ReadPosRankSum=9.964;VQSLOD=1.3346;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:28:33.13:0,33,596	0/0:9,0:9:21.07:0,21,360	0/0:14,0:4:11.73:0,12,117	0/0:27,0:5:11.01:0,11,140	1/1:8,7:15:2.16:12,2,0	1/1:13,0:13:2.99:24,3,0	1/1:16,0:16:2.82:40,3,0	0/0:49,0:45:99:0,123,1598	1/1:7,2:9:11.58:65,12,0	0/0:44,0:43:99:0,129,2067	0/0:19,0:19:49.01:0,49,919	0/0:29,0:29:9.79:0,10,388	0/0:28,0:28:6.26:0,6,339	0/1:27,0:27:10.04:10,0,251	0/0:31,0:31:3.18:0,3,411	0/0:48,0:48:99:0,115,2148	0/0:25,0:22:48.12:0,48,741	0/0:15,0:15:33.08:0,33,532	0/0:17,0:15:43.65:0,44,517	0/0:15,0:15:26.44:0,26,434	0/0:28,0:27:59.30:0,59,860	0/0:21,0:20:4.64:0,5,165	0/1:16,0:16:21.17:22,0,21	0/0:19,0:19:9.03:0,9,286	1/1:14,0:14:6.28:34,6,0	0/0:40,0:38:99:0,105,1625	0/0:32,0:29:35.22:0,35,560	0/0:20,0:16:30.10:0,30,522
chr10	109887967	.	T	TA	546.74	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.196;DP=462;FS=0.000;HRun=12;HaplotypeScore=56.6835;InbreedingCoeff=0.8327;MQ=54.14;MQ0=11;MQRankSum=0.643;QD=9.76;ReadPosRankSum=0.159;VQSLOD=2.4993;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:64.61:0,65,465	0/0:5,0:5:8.91:0,9,66	0/0:8,0:4:6.31:0,6,49	0/0:5,0:2:5.94:0,6,41	1/1:6,12:17:12.74:104,13,0	1/1:3,6:9:11.93:98,12,0	1/1:0,7:8:20.87:189,21,0	0/0:41,0:38:86.38:0,86,631	1/1:4,8:12:21.03:204,21,0	0/0:29,0:28:68.53:0,69,498	0/0:16,0:16:35.72:0,36,259	0/0:13,0:13:23.83:0,24,175	0/0:18,1:19:15.55:0,16,277	0/0:13,0:13:17.84:0,18,127	0/0:15,1:16:12.59:0,13,255	0/0:17,2:19:3.53:0,4,186	0/0:28,0:26:56.64:0,57,416	0/0:22,0:22:43.48:0,43,311	0/0:18,0:17:28.81:0,29,201	0/0:15,0:15:32.73:0,33,239	0/0:12,0:12:20.84:0,21,153	0/0:9,0:9:3.04:0,3,76	0/0:11,0:10:14.90:0,15,109	0/0:15,0:15:29.71:0,30,219	1/1:1,7:6:12.02:117,12,0	0/0:18,0:19:36.86:0,37,252	0/0:22,0:22:47.70:0,48,351	0/0:15,1:17:17.55:0,18,278
chr10	109888266	.	AAG	A	591.21	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=2.893;DP=401;FS=7.830;HRun=0;HaplotypeScore=55.5738;InbreedingCoeff=0.8533;MQ=62.52;MQ0=13;MQRankSum=-0.493;QD=9.69;ReadPosRankSum=3.569;VQSLOD=2.0564;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:41.47:0,41,304	0/0:3,0:3:5.89:0,6,64	0/0:9,0:6:17.91:0,18,168	0/0:13,0:10:20.21:0,20,269	1/1:1,11:9:11.85:90,12,0	1/1:2,8:9:8.76:85,9,0	1/1:6,16:21:35.53:400,36,0	0/0:41,0:40:95.14:0,95,801	1/1:1,7:8:11.98:129,12,0	0/0:15,0:14:42.06:0,42,512	0/0:7,0:7:21.02:0,21,301	0/0:16,0:16:41.93:0,42,514	0/0:12,0:12:23.86:0,24,280	0/0:19,0:18:35.57:0,36,409	0/0:21,0:21:56.56:0,57,580	0/0:13,0:13:26.85:0,27,305	0/0:27,0:23:38.44:0,38,257	0/0:16,1:17:3.70:0,4,169	0/0:13,0:13:35.79:0,36,278	0/0:7,0:6:11.84:0,12,81	0/0:11,0:10:16:0,16,115	0/0:4,0:3:9.03:0,9,135	0/0:7,0:5:14.93:0,15,147	0/0:16,0:16:33.51:0,34,406	1/1:1,8:8:5.50:45,6,0	0/0:20,0:19:47.82:0,48,422	0/0:11,0:10:29.55:0,30,268	0/0:12,0:12:26.71:0,27,215
chr10	109889234	.	GC	G	7255.72	PASS	AB=0.618;AC=32;AF=0.571;AN=56;BaseQRankSum=19.260;DP=820;FS=31.801;HRun=2;HaplotypeScore=183.5188;InbreedingCoeff=0.8538;MQ=89.41;MQ0=0;MQRankSum=-5.157;QD=14.31;ReadPosRankSum=6.273;VQSLOD=2.2904;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,22:42:43.72:521,44,0	0/0:12,0:12:30.09:0,30,429	0/0:34,0:34:99:0,99,1344	0/0:39,0:39:99:0,103,1393	0/0:22,0:22:39.10:0,39,524	0/0:24,0:24:72.22:0,72,1039	0/0:27,0:27:81.27:0,81,1204	1/1:8,20:28:26.48:369,26,0	0/0:34,0:34:99:0,102,1480	0/0:34,0:34:99:0,102,1406	0/0:18,0:18:42.12:0,42,587	1/1:9,16:25:56.21:443,56,0	1/1:7,17:24:48.15:407,48,0	0/1:15,16:31:5.86:334,0,6	1/1:11,46:57:99:1081,138,0	0/0:40,0:40:99:0,117,1692	1/1:7,28:35:74.09:574,74,0	0/1:5,14:19:41.68:244,0,42	1/1:9,12:21:6.39:277,6,0	1/1:16,8:24:41.58:337,42,0	1/1:23,17:40:18.75:321,19,0	1/1:16,10:25:29.84:268,30,0	1/1:9,10:19:29.37:274,29,0	1/1:8,17:25:30.90:391,31,0	0/0:29,0:29:75.25:0,75,1102	1/1:18,22:40:78.54:576,79,0	1/1:7,21:28:67.38:512,67,0	1/1:9,14:23:22.70:326,23,0
chr10	109889237	.	TGTC	T	12534.38	PASS	AB=0.576;AC=33;AF=0.589;AN=56;BaseQRankSum=18.740;DP=785;FS=30.266;HRun=0;HaplotypeScore=190.0618;InbreedingCoeff=0.9223;MQ=90.01;MQ0=0;MQRankSum=-7.441;QD=26.39;ReadPosRankSum=5.554;VQSLOD=2.9307;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,22:39:54.67:883,55,0	0/0:12,0:12:30.10:0,30,738	0/0:30,0:30:87.26:0,87,1871	0/0:41,0:41:99:0,104,2193	0/0:21,0:21:35.98:0,36,834	0/0:24,0:24:72.25:0,72,1736	0/0:27,0:27:81.28:0,81,1982	1/1:7,20:27:40.88:752,41,0	0/0:34,0:34:99:0,99,2427	0/0:36,0:36:99:0,105,2446	0/0:18,0:18:39.13:0,39,960	1/1:7,16:23:60.17:768,60,0	1/1:6,17:23:54.17:726,54,0	1/1:14,16:30:13.11:641,13,0	1/1:10,46:56:99:1871,141,0	0/0:39,0:39:99:0,117,2805	1/1:4,28:32:75.24:1000,75,0	0/1:5,14:19:20.70:409,0,21	1/1:9,12:21:19.21:525,19,0	1/1:10,8:18:36.03:454,36,0	1/1:23,17:40:31.68:530,32,0	1/1:14,10:23:38.02:445,38,0	1/1:8,11:19:35.93:474,36,0	1/1:5,17:22:38.95:654,39,0	0/0:28,0:28:78.27:0,78,1918	1/1:15,22:37:69.22:902,69,0	1/1:6,21:27:69.22:887,69,0	1/1:4,14:18:33.22:613,33,0
chr10	109889240	.	C	CT	4751.58	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=20.017;DP=679;FS=32.549;HRun=1;HaplotypeScore=172.0058;InbreedingCoeff=0.9996;MQ=92.80;MQ0=0;MQRankSum=-5.066;QD=12.44;ReadPosRankSum=4.287;VQSLOD=1.7715;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,4:30:57.23:349,57,0	0/0:12,0:12:30.08:0,30,375	0/0:26,0:26:45.91:0,46,826	0/0:40,0:40:61.09:0,61,1085	0/0:18,0:18:33.11:0,33,428	0/0:23,0:23:69.22:0,69,896	0/0:29,0:29:81.22:0,81,1050	1/1:22,2:24:55.03:258,55,0	0/0:34,0:34:99:0,99,1284	0/0:33,0:33:93.30:0,93,1206	0/0:16,0:16:39.13:0,39,506	1/1:22,0:22:60.29:422,60,0	1/1:17,0:18:48.76:232,49,0	1/1:18,3:21:51.26:251,51,0	1/1:48,4:52:99:592,128,0	0/0:38,0:38:99:0,114,1452	1/1:28,2:30:67.84:314,68,0	1/1:17,0:17:35.81:192,36,0	1/1:12,4:16:44.46:348,44,0	1/1:8,4:12:27.95:140,28,0	1/1:20,6:25:38.62:229,39,0	1/1:14,0:14:29.70:176,30,0	1/1:11,0:11:31.33:165,31,0	1/1:21,0:21:49.97:267,50,0	0/0:28,0:28:78.24:0,78,998	1/1:23,2:25:60:313,60,0	1/1:22,5:27:57.07:262,57,0	1/1:14,2:16:44.25:243,44,0
chr10	109889543	.	T	TGGTTC	501.89	PASS	AB=0.867;AC=15;AF=0.326;AN=46;BaseQRankSum=-0.497;DP=195;FS=1.226;HRun=0;HaplotypeScore=62.2739;InbreedingCoeff=0.2443;MQ=41.61;MQ0=20;MQRankSum=-2.701;QD=8.96;ReadPosRankSum=0.175;VQSLOD=1.9096;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:1:3.01:0,3,54	0/0:10,0:8:24.08:0,24,421	1/1:2,0:1:3:27,3,0	0/0:5,0:4:6.02:0,6,96	0/0:17,0:16:27.56:0,28,475	0/0:13,0:11:33.08:0,33,532	0/0:10,0:8:15.05:0,15,226	0/1:16,0:14:35.06:35,0,372	0/0:11,0:11:21.06:0,21,362	0/0:19,0:19:46.92:0,47,804	0/0:7,0:7:6.95:0,7,182	0/1:4,0:3:1.02:1,0,48	1/1:0,1:1:3.01:61,3,0	0/0:3,0:2:3.01:0,3,53	0/0:3,1:4:6.02:0,6,100	0/0:19,0:18:45.15:0,45,832	1/1:5,0:4:5.35:50,5,0	./.	0/1:10,0:9:36.20:36,0,317	1/1:4,0:3:6:87,6,0	0/0:3,0:1:2.68:0,3,11	1/1:4,0:3:3.01:47,3,0	./.	./.	./.	0/1:2,1:3:48.59:143,0,49	0/1:3,3:4:69.57:154,0,70	./.
chr10	109889551	.	TCGGAGC	T	88.65	PASS	AB=0.877;AC=7;AF=0.167;AN=42;BaseQRankSum=-5.155;DP=164;FS=4.679;HRun=0;HaplotypeScore=46.1296;InbreedingCoeff=0.1389;MQ=37.58;MQ0=26;MQRankSum=1.590;QD=2.69;ReadPosRankSum=-3.499;VQSLOD=0.3457;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:1:2.90:16,3,0	0/0:7,0:4:8.44:0,8,194	0/0:1,0:1:2.84:0,3,14	./.	0/0:11,0:10:8.53:0,9,261	0/0:9,0:9:27.09:0,27,757	0/0:7,0:7:14.88:0,15,352	0/1:5,7:8:69.04:99,0,69	0/0:4,0:7:12.04:0,12,345	0/0:11,0:11:26.74:0,27,664	0/0:8,0:8:14.47:0,14,329	0/1:3,0:3:6.98:7,0,69	0/0:1,0:1:3.01:0,3,93	./.	1/1:4,0:4:2.94:18,3,0	0/0:17,0:16:38.50:0,39,996	0/0:5,0:4:9.03:0,9,275	./.	0/1:12,0:9:57.17:57,0,243	0/0:4,0:3:6.02:0,6,172	./.	0/0:4,0:3:3.01:0,3,83	./.	./.	0/0:4,0:4:3.01:0,3,93	0/0:3,0:2:6.02:0,6,188	0/0:5,0:3:9.03:0,9,283	./.
chr10	109889601	.	TA	T	2141.23	PASS	AB=0.500;AC=35;AF=0.972;AN=36;DP=105;FS=0.000;HRun=2;HaplotypeScore=30.1970;InbreedingCoeff=0.0911;MQ=25.40;MQ0=11;QD=24.33;VQSLOD=3.2169;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,2:2:3.01:39,3,0	1/1:2,5:5:12.04:155,12,0	./.	./.	./.	1/1:0,6:6:18.06:233,18,0	1/1:0,6:6:12.04:155,12,0	1/1:0,4:4:12.04:156,12,0	1/1:0,3:3:9.03:117,9,0	1/1:0,8:8:21.07:272,21,0	1/1:0,4:4:6.02:78,6,0	./.	./.	./.	0/1:0,2:2:0:0,0,0	1/1:1,11:11:24.08:311,24,0	1/1:0,7:7:18.06:233,18,0	1/1:1,3:4:9.03:117,9,0	1/1:1,2:3:6.02:78,6,0	1/1:0,1:1:3.01:39,3,0	1/1:2,4:4:3.01:39,3,0	./.	./.	./.	1/1:0,4:4:9.03:117,9,0	./.	1/1:2,1:2:3.01:39,3,0	1/1:4,1:1:3.01:39,3,0
chr10	109889664	.	C	CAG	178.51	PASS	AC=6;AF=0.130;AN=46;BaseQRankSum=-2.648;DP=375;FS=0.000;HRun=0;HaplotypeScore=32.1524;InbreedingCoeff=0.4388;MQ=27.59;MQ0=150;MQRankSum=-1.138;QD=6.87;ReadPosRankSum=1.540;VQSLOD=2.1241;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:5:14.90:0,15,118	./.	0/0:59,0:15:31.16:0,31,374	0/0:62,0:9:15.45:0,15,161	1/1:5,2:2:6.02:115,6,0	./.	1/1:4,3:4:2.58:56,3,0	0/0:18,0:6:14.93:0,15,129	./.	0/0:19,0:5:12.44:0,12,110	0/0:4,0:3:5.98:0,6,46	0/0:8,0:1:3.01:0,3,32	./.	0/0:9,0:2:2.98:0,3,22	0/0:8,0:5:8.73:0,9,50	0/0:8,0:4:5.99:0,6,50	0/0:19,0:12:26.63:0,27,207	0/0:13,0:7:17.84:0,18,126	0/0:11,0:2:2.97:0,3,20	0/0:6,0:3:5.91:0,6,40	0/0:10,0:7:11.94:0,12,90	0/0:5,0:2:3.86:0,4,22	./.	0/0:7,0:2:5.97:0,6,44	1/1:9,3:2:6.02:115,6,0	0/0:13,0:4:2.98:0,3,21	0/0:5,0:3:5.97:0,6,45	0/0:31,0:5:8.96:0,9,78
chr10	109889692	.	T	TGG	188.94	PASS	AB=0.961;AC=13;AF=0.250;AN=52;BaseQRankSum=3.784;DP=466;FS=26.979;HRun=0;HaplotypeScore=27.3471;InbreedingCoeff=-0.1447;MQ=20.54;MQ0=231;MQRankSum=-3.593;QD=0.85;ReadPosRankSum=1.573;VQSLOD=0.4228;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:9,1:5:35.22:35,0,63	1/1:8,0:1:2.22:7,2,0	0/0:32,0:9:23.10:0,23,260	0/1:32,0:5:1.51:2,0,28	0/0:7,0:5:11.95:0,12,126	0/0:11,0:5:9.03:0,9,108	0/0:11,0:7:20.92:0,21,214	0/0:19,0:1:1.55:0,2,4	./.	0/0:24,0:10:25.54:0,26,242	0/1:7,0:5:1.61:2,0,97	0/1:15,0:6:10.63:11,0,100	0/1:12,0:10:99:117,0,111	0/0:11,0:4:4.80:0,5,27	0/1:14,4:13:65.38:65,0,89	0/0:12,0:6:9.03:0,9,113	0/1:23,0:12:23.15:23,0,239	0/0:12,0:6:15.05:0,15,189	0/1:57,0:3:0.02:0,0,60	0/1:12,0:7:32.02:32,0,119	0/0:20,0:6:12.03:0,12,138	0/0:8,0:4:12.01:0,12,138	./.	0/0:13,0:6:12.04:0,12,157	0/0:17,0:7:18.05:0,18,217	0/1:21,0:9:1.94:2,0,163	0/1:6,1:5:19.40:19,0,94	0/0:36,0:11:14.53:0,15,154
chr10	109889910	.	TCC	T	2368.20	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.327;DP=584;FS=1.785;HRun=2;HaplotypeScore=73.0484;InbreedingCoeff=0.8798;MQ=52.76;MQ0=42;MQRankSum=-0.270;QD=28.88;ReadPosRankSum=0.988;VQSLOD=3.1795;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:84.23:0,84,1655	0/0:2,0:2:6.02:0,6,119	0/0:26,0:10:30.10:0,30,610	0/0:32,0:17:50.65:0,51,940	1/1:0,5:5:12.04:195,12,0	1/1:0,12:11:27.09:440,27,0	1/1:10,34:34:66.23:1075,66,0	0/0:15,0:14:42.11:0,42,749	1/1:1,15:15:39.13:632,39,0	0/0:17,0:16:48.16:0,48,927	0/0:7,0:7:9.02:0,9,183	0/0:15,0:14:33.11:0,33,669	0/0:21,0:20:53.97:0,54,1029	0/0:29,0:27:72.25:0,72,1458	0/0:32,0:31:84.29:0,84,1703	0/0:27,0:26:78.20:0,78,1468	0/0:39,0:37:90.29:0,90,1702	0/0:28,0:24:69.10:0,69,1346	0/0:21,0:17:49.59:0,50,914	0/0:3,0:3:6.02:0,6,122	0/0:35,0:31:63.22:0,63,1273	0/0:3,0:3:6.02:0,6,122	0/0:6,0:5:6.02:0,6,121	0/0:54,0:51:99:0,117,2344	1/1:0,5:4:12.04:195,12,0	0/0:16,0:16:41.35:0,41,796	0/0:31,0:30:85.58:0,86,1594	0/0:8,0:8:17.95:0,18,319
chr10	109889989	.	G	GTGTC	8360.39	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-13.688;DP=695;FS=10.956;HRun=0;HaplotypeScore=114.6890;InbreedingCoeff=0.9716;MQ=72.97;MQ0=5;MQRankSum=-1.280;QD=52.58;ReadPosRankSum=6.525;VQSLOD=5.6244;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:78.24:0,78,1308	0/0:5,0:5:15.05:0,15,257	0/0:34,0:30:57.11:0,57,883	0/0:34,0:30:60.14:0,60,881	0/0:17,0:17:48.15:0,48,789	0/0:15,0:14:39.13:0,39,668	0/0:42,0:42:90.25:0,90,1476	0/0:19,0:19:33.11:0,33,566	0/0:30,0:30:75.18:0,75,1204	0/0:23,0:23:54.16:0,54,873	0/0:22,0:22:57.18:0,57,944	1/1:4,21:25:54.02:1348,54,0	1/1:4,21:25:54.18:1356,54,0	1/1:2,21:22:45.15:1131,45,0	1/1:1,30:31:75.26:1886,75,0	0/0:30,0:30:63.17:0,63,1039	0/0:33,0:33:74.28:0,74,1229	0/0:25,0:25:55.80:0,56,897	0/0:30,0:30:69.14:0,69,1038	0/0:12,0:12:30.10:0,30,514	0/0:33,0:33:90.29:0,90,1496	1/1:4,2:6:6.02:149,6,0	1/1:0,8:8:11.80:301,12,0	1/1:6,33:40:87.30:2188,87,0	0/0:12,0:12:30.10:0,30,512	0/0:38,0:38:93.30:0,93,1561	0/0:26,0:26:57.20:0,57,978	0/0:23,0:23:51.17:0,51,875
chr10	109890181	.	AT	A	1979.47	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.474;DP=561;FS=4.960;HRun=8;HaplotypeScore=80.0692;InbreedingCoeff=0.9734;MQ=69.40;MQ0=5;MQRankSum=1.706;QD=20.84;ReadPosRankSum=3.263;VQSLOD=3.8527;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:87.14:0,87,993	0/0:9,0:8:21.06:0,21,253	0/0:29,0:17:8.85:0,9,156	0/0:27,1:18:12.42:0,12,222	1/1:4,13:17:42.04:395,42,0	1/1:5,15:20:60.07:569,60,0	1/1:2,13:15:27.03:256,27,0	0/0:32,0:32:57.55:0,58,660	1/1:11,12:23:41:422,41,0	0/0:25,0:25:60.18:0,60,716	0/0:11,0:11:24.07:0,24,289	0/0:14,0:14:29.92:0,30,255	0/0:13,0:13:25.95:0,26,208	0/0:9,0:9:15.59:0,16,118	0/0:21,0:21:50.32:0,50,473	0/0:23,0:23:61.24:0,61,687	0/0:28,0:28:69.65:0,70,807	0/0:16,0:15:36.11:0,36,434	0/0:21,0:21:63.17:0,63,738	0/0:10,0:10:27.04:0,27,321	0/0:13,0:13:30.04:0,30,334	0/0:10,0:10:29.78:0,30,282	0/0:23,0:21:47.91:0,48,436	0/0:28,0:28:59.74:0,60,540	1/1:3,17:20:54.07:513,54,0	0/0:31,0:31:84.23:0,84,985	0/0:28,0:28:75.19:0,75,888	0/0:10,0:10:24.07:0,24,289
chr10	109890190	.	CT	C	3020.17	PASS	AB=0.912;AC=26;AF=0.464;AN=56;BaseQRankSum=10.101;DP=554;FS=17.350;HRun=12;HaplotypeScore=68.2722;InbreedingCoeff=0.8461;MQ=65.18;MQ0=11;MQRankSum=0.491;QD=11.23;ReadPosRankSum=4.704;VQSLOD=1.3834;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,2:36:39.09:0,39,676	0/0:8,0:7:15.03:0,15,152	0/1:22,3:13:15.91:16,0,70	0/1:25,2:17:36.86:37,0,63	1/1:3,17:20:38.75:294,39,0	1/1:8,15:23:50.80:391,51,0	1/1:5,8:14:25.92:185,26,0	0/0:27,1:28:17.81:0,18,364	1/1:7,16:22:26.51:240,27,0	0/0:22,0:23:44.75:0,45,418	0/0:11,0:11:18.01:0,18,170	1/1:2,14:16:29.37:218,29,0	1/1:1,9:10:26.89:209,27,0	1/1:4,5:9:14.83:116,15,0	1/1:7,14:21:44.66:346,45,0	0/0:23,0:22:52.73:0,53,508	0/0:28,0:30:55.17:0,55,671	0/0:17,0:16:38.75:0,39,375	0/0:21,0:20:33.50:0,33,326	0/0:14,0:14:29.76:0,30,271	0/0:10,0:10:18.03:0,18,180	1/1:4,9:14:19.84:137,20,0	1/1:5,18:20:14.38:295,14,0	1/1:3,22:25:47.81:371,48,0	1/1:2,16:19:52.79:390,53,0	0/0:26,0:26:65.79:0,66,645	0/0:27,0:27:53.36:0,53,599	0/0:8,0:9:23.84:0,24,211
chr10	109891702	.	AG	A	536.92	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.709;DP=443;FS=7.635;HRun=1;HaplotypeScore=64.4799;InbreedingCoeff=0.9012;MQ=55.18;MQ0=13;MQRankSum=-7.413;QD=10.53;ReadPosRankSum=-2.345;VQSLOD=0.3105;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.22:0,93,1328	0/0:6,0:6:18.06:0,18,263	0/0:14,0:5:14.87:0,15,163	0/0:24,0:12:16.36:0,16,215	1/1:7,7:14:22.40:170,22,0	1/1:15,1:16:39.20:224,39,0	1/1:6,2:5:6.12:94,6,0	0/0:35,0:32:88.81:0,89,1305	1/1:5,0:5:8.30:59,8,0	0/0:18,0:18:54.17:0,54,772	0/0:16,0:15:45.05:0,45,609	0/0:9,0:9:12.04:0,12,168	0/0:7,0:7:9.01:0,9,89	0/0:9,0:8:21.06:0,21,256	0/0:10,0:10:6.01:0,6,62	0/0:14,0:14:42.14:0,42,612	0/0:34,0:33:96.28:0,96,1342	0/0:24,0:24:72.22:0,72,1013	0/0:22,0:18:50.75:0,51,693	0/0:18,0:18:33.28:0,33,721	0/0:10,0:10:30.09:0,30,419	0/0:14,0:13:36.08:0,36,450	0/0:7,0:7:15.05:0,15,204	0/0:12,0:11:27.01:0,27,339	1/1:6,2:8:21.31:153,21,0	0/0:20,0:20:60.20:0,60,877	0/0:17,0:17:51.05:0,51,673	0/0:20,0:19:57.19:0,57,829
chr10	109891707	.	AG	A	518.84	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.779;DP=445;FS=26.988;HRun=1;HaplotypeScore=67.0253;InbreedingCoeff=0.8284;MQ=57.97;MQ0=8;MQRankSum=-6.809;QD=11.28;ReadPosRankSum=-0.879;VQSLOD=0.1605;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1191	0/0:7,0:7:21.07:0,21,262	0/0:13,0:5:10.39:0,10,113	0/0:27,0:16:3.53:0,4,202	1/1:10,4:14:27.23:184,27,0	1/1:15,0:15:37.65:245,38,0	1/1:6,1:5:8.41:101,8,0	0/0:40,0:37:99:0,108,1247	1/1:4,0:4:6.20:38,6,0	0/0:18,0:18:54.16:0,54,656	0/0:14,0:13:35.97:0,36,404	0/0:9,0:9:11.71:0,12,80	0/0:6,0:6:5.55:0,6,26	0/0:9,0:9:19.16:0,19,104	0/0:9,0:9:2.74:0,3,12	0/0:14,0:14:42:0,42,430	0/0:34,0:34:98.81:0,99,1102	0/0:25,0:25:75.11:0,75,863	0/0:21,0:18:48.57:0,49,552	0/0:19,0:19:12.37:0,12,595	0/0:10,0:10:30.10:0,30,376	0/0:11,0:10:26.14:0,26,178	0/0:7,0:7:11.43:0,11,69	0/0:13,0:12:21.81:0,22,120	1/1:4,2:6:15.38:112,15,0	0/0:21,0:21:63.01:0,63,684	0/0:15,0:15:45.14:0,45,554	0/0:22,0:21:63.10:0,63,708
chr10	109891708	.	G	GAAAAGAAAAGA	2086.13	PASS	AB=0.870;AC=19;AF=0.339;AN=56;BaseQRankSum=0.698;DP=450;FS=38.437;HRun=0;HaplotypeScore=140.8679;InbreedingCoeff=0.6616;MQ=58.17;MQ0=7;MQRankSum=-4.239;QD=18.96;ReadPosRankSum=-1.167;VQSLOD=1.2302;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:35:67.21:0,67,2017	0/0:7,0:7:21.03:0,21,451	0/0:13,0:5:9.07:0,9,89	0/0:24,0:16:15.18:0,15,160	1/1:15,0:15:10.84:52,11,0	0/1:14,0:14:17.55:18,0,351	0/1:7,0:5:0.20:4,0,0	0/0:41,0:38:99:0,108,985	0/0:4,0:4:1.41:0,1,8	0/0:20,0:20:51.05:0,51,1019	0/0:13,0:13:24.43:0,24,681	1/1:3,2:10:3:164,3,0	1/1:1,4:7:6.02:305,6,0	1/1:1,5:9:15.04:646,15,0	1/1:0,6:10:3.01:165,3,0	0/0:14,0:14:36:0,36,435	0/0:33,0:34:91.99:0,92,1514	0/0:25,0:25:66.08:0,66,1380	0/0:17,0:17:41.06:0,41,671	0/0:19,0:19:50.77:0,51,1149	0/0:10,0:10:30.03:0,30,630	0/1:4,5:10:6.73:377,0,7	1/1:2,2:8:4.76:169,5,0	1/1:5,0:12:24.05:344,24,0	1/1:6,0:6:5.54:26,6,0	0/0:20,0:21:60.07:0,60,1208	0/0:15,0:15:45.03:0,45,792	0/0:22,0:21:63.09:0,63,1271
chr10	109891809	.	CT	C	2329.75	PASS	AB=0.577;AC=8;AF=0.143;AN=56;BaseQRankSum=8.460;DP=459;FS=3.039;HRun=2;HaplotypeScore=46.5350;InbreedingCoeff=0.6125;MQ=52.98;MQ0=13;MQRankSum=2.531;QD=27.74;ReadPosRankSum=2.227;VQSLOD=3.3398;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:81.27:0,81,1211	0/0:4,0:4:12.04:0,12,180	0/0:4,0:1:3.01:0,3,45	0/0:6,0:1:3.01:0,3,45	1/1:0,23:23:63.20:818,63,0	0/1:6,20:26:26.48:677,0,26	1/1:2,8:8:24.08:311,24,0	0/0:41,0:34:99:0,99,1398	0/1:3,7:10:65.70:210,0,66	0/0:18,0:17:51.17:0,51,748	0/0:17,0:17:42.14:0,42,629	0/0:10,0:9:18.06:0,18,269	0/0:5,0:5:15.04:0,15,205	0/0:11,0:11:24.08:0,24,360	0/0:7,0:5:15.04:0,15,207	0/0:13,0:13:39.12:0,39,565	0/0:42,0:40:99:0,105,1573	0/0:31,0:31:84.28:0,84,1250	0/0:24,0:19:48.15:0,48,700	0/0:18,0:18:48.14:0,48,681	0/0:14,0:13:36.12:0,36,540	0/0:5,0:5:15.05:0,15,225	0/0:10,0:10:27.09:0,27,405	0/0:6,0:5:12.04:0,12,180	1/1:1,14:15:36.12:467,36,0	0/0:23,0:23:60.20:0,60,899	0/0:21,0:21:51.16:0,51,743	0/0:15,0:15:33.11:0,33,495
chr10	109891864	.	TAAA	T	1049.26	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.508;DP=437;FS=3.174;HRun=14;HaplotypeScore=64.0750;InbreedingCoeff=0.8454;MQ=54.28;MQ0=11;MQRankSum=-1.757;QD=18.74;ReadPosRankSum=1.718;VQSLOD=2.6224;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:22:48.16:0,48,870	0/0:6,0:6:18.06:0,18,331	0/0:21,0:5:6.02:0,6,87	0/0:14,0:1:3.01:0,3,42	1/1:3,10:13:27.03:315,27,0	1/1:8,7:15:10.32:279,10,0	1/1:3,4:7:18.05:208,18,0	0/0:48,0:46:99:0,117,2010	1/1:4,5:10:4:201,4,0	0/0:10,0:12:24.08:0,24,425	0/0:19,0:19:45.14:0,45,814	0/0:12,0:12:27:0,27,407	0/0:7,0:7:18.06:0,18,339	0/0:10,0:10:17.96:0,18,234	0/0:7,0:6:18.02:0,18,302	0/0:12,0:12:27.08:0,27,479	0/0:39,0:38:89.38:0,89,1377	0/0:22,0:24:54.08:0,54,809	0/0:28,0:26:48.12:0,48,836	0/0:14,0:17:51.07:0,51,778	0/0:5,0:5:12.03:0,12,195	0/0:6,0:6:18.02:0,18,277	0/0:8,0:8:15.05:0,15,268	0/0:5,0:4:6.02:0,6,113	1/1:4,6:10:16.35:207,16,0	0/0:23,0:22:51.16:0,51,878	0/0:12,0:16:29.96:0,30,394	0/0:16,0:17:36.04:0,36,559
chr10	109892536	.	CATGTTGAGTAGACATTGCTCATGT	C	1508.11	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.926;DP=782;FS=6.248;HRun=0;HaplotypeScore=290.4719;InbreedingCoeff=0.9672;MQ=45.14;MQ0=161;MQRankSum=-0.871;QD=11.51;ReadPosRankSum=-4.160;VQSLOD=1.2457;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:38:99:0,105,1424	0/0:8,0:8:21.07:0,21,338	0/0:36,0:7:21.06:0,21,348	0/0:55,0:10:27.65:0,28,363	1/1:17,17:17:36.09:392,36,0	1/1:16,0:5:9.03:101,9,0	1/1:21,0:6:9.03:117,9,0	0/0:29,0:21:60.16:0,60,922	1/1:42,0:22:63.20:780,63,0	0/0:35,0:21:60.18:0,60,1007	0/0:15,0:12:36.10:0,36,559	0/0:27,0:24:72.23:0,72,1081	0/0:30,0:30:87.21:0,87,1333	0/0:21,0:18:54.16:0,54,822	0/0:31,0:29:87.25:0,87,1322	0/0:35,0:24:63.17:0,63,909	0/0:27,0:23:66.19:0,66,951	0/0:18,0:12:36.10:0,36,543	0/0:22,0:12:33.10:0,33,531	0/0:17,0:12:33.09:0,33,493	0/0:67,0:44:99:0,120,1707	0/0:16,0:16:48.14:0,48,739	0/0:10,0:8:21.07:0,21,347	0/0:30,0:24:69.11:0,69,955	1/1:18,0:6:18.06:285,18,0	0/0:34,0:26:69.18:0,69,1108	0/0:23,0:20:45.62:0,46,711	0/0:20,0:14:39.09:0,39,564
chr10	109892708	.	GCA	G	719.49	PASS	AB=1.000;AC=24;AF=0.500;AN=48;BaseQRankSum=1.301;DP=308;FS=0.814;HRun=0;HaplotypeScore=59.0067;InbreedingCoeff=0.3849;MQ=62.04;MQ0=7;MQRankSum=2.296;QD=3.49;ReadPosRankSum=0.591;VQSLOD=1.9193;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:1.46:88,0,1	0/0:5,0:5:15.01:0,15,180	0/0:12,0:3:0:0,0,0	0/1:14,0:7:9.54:16,0,10	./.	1/1:6,2:7:15.04:184,15,0	1/1:7,4:11:2.97:41,3,0	1/1:22,0:22:16.46:113,16,0	./.	0/0:8,0:7:18.06:0,18,317	0/0:7,0:7:15.02:0,15,200	0/0:14,0:14:5.84:0,6,65	0/0:8,0:8:3.47:0,3,26	1/1:9,0:9:1.35:24,1,0	0/0:5,0:5:0:0,0,0	0/0:13,0:13:30.90:0,31,464	1/1:31,0:30:3.46:24,3,0	1/1:23,0:23:11.73:71,12,0	1/1:2,12:13:22.19:173,22,0	0/1:9,0:9:22.24:53,0,22	0/1:15,0:14:3.88:4,0,10	./.	0/0:3,0:3:0:0,0,0	0/0:14,0:13:3.42:0,3,21	./.	1/1:10,0:10:1.49:29,1,0	1/1:6,0:5:2.29:33,2,0	1/1:4,0:4:2.80:13,3,0
chr10	109894719	.	AGCTTTGCGTCG	A	6295.16	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=2.651;DP=537;FS=8.463;HRun=0;HaplotypeScore=212.6413;InbreedingCoeff=0.9601;MQ=72.59;MQ0=0;MQRankSum=-11.784;QD=52.03;ReadPosRankSum=1.972;VQSLOD=3.7401;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:67.13:0,67,3055	0/0:12,0:12:33.11:0,33,1792	0/0:13,0:13:36.12:0,36,1611	0/0:24,0:24:66.12:0,66,3049	0/0:18,0:18:54.14:0,54,2402	0/0:17,0:17:51.18:0,51,2709	0/0:19,0:19:54.19:0,54,2691	0/0:19,0:19:51.17:0,51,2042	0/0:20,0:20:60.21:0,60,2942	0/0:18,0:18:51.17:0,51,2600	0/0:11,0:11:33.10:0,33,1702	1/1:2,17:19:45.15:1602,45,0	1/1:0,13:13:23.90:853,24,0	1/1:1,18:19:24.08:853,24,0	1/1:1,21:22:42.14:1494,42,0	0/0:23,0:23:66.23:0,66,3757	0/0:26,0:26:56:0,56,2481	0/0:20,0:20:51.78:0,52,2147	0/0:14,0:13:36.08:0,36,1228	0/0:21,0:21:63.19:0,63,2305	0/0:33,0:33:82.26:0,82,3452	1/1:4,6:10:12.04:424,12,0	1/1:2,7:9:3.01:107,3,0	1/1:2,27:28:28.62:961,29,0	0/0:22,0:22:66.23:0,66,3572	0/0:22,0:22:63.22:0,63,2559	0/0:17,0:17:35.69:0,36,1449	0/0:9,0:9:21.07:0,21,866
chr10	109894727	.	G	GTCC	10729.30	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-6.685;DP=515;FS=5.097;HRun=0;HaplotypeScore=120.2433;InbreedingCoeff=0.9609;MQ=78.05;MQ0=0;MQRankSum=-3.094;QD=49.44;ReadPosRankSum=0.561;VQSLOD=6.7593;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:40:72.25:1650,72,0	0/0:10,0:10:30.10:0,30,499	0/0:14,0:14:39.12:0,39,621	0/0:23,0:23:59.40:0,59,1068	0/0:16,0:16:39.05:0,39,593	0/0:17,0:17:48.16:0,48,810	0/0:20,0:20:48.16:0,48,818	1/1:3,16:20:54.17:1170,54,0	0/0:17,0:17:48.16:0,48,813	0/0:17,0:17:51.17:0,51,814	0/0:12,0:12:36.08:0,36,509	0/0:17,0:17:44.64:0,45,316	0/0:13,0:13:22.32:0,22,151	0/0:18,0:18:22.65:0,23,153	0/0:21,0:21:41.66:0,42,295	0/0:23,0:23:69.24:0,69,1171	1/1:0,27:28:57.20:1313,57,0	1/1:3,17:19:45.15:1038,45,0	1/1:4,10:14:33.10:692,33,0	1/1:0,20:21:53.97:995,54,0	1/1:0,33:34:72.25:1657,72,0	0/0:6,0:6:11.90:0,12,84	0/0:7,0:7:2.98:0,3,21	0/0:27,0:27:11.23:0,11,118	0/0:20,0:20:57.19:0,57,964	1/1:2,15:17:51.17:1111,51,0	1/1:0,14:15:33.11:757,33,0	1/1:0,7:7:15.05:346,15,0
chr10	109894870	.	GGA	G	1716.62	PASS	AB=0.857;AC=18;AF=0.321;AN=56;BaseQRankSum=8.263;DP=427;FS=7.117;HRun=0;HaplotypeScore=68.2325;InbreedingCoeff=0.4184;MQ=48.14;MQ0=19;MQRankSum=-0.678;QD=10.73;ReadPosRankSum=4.487;VQSLOD=2.4482;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:66.56:0,67,695	0/0:9,0:9:26.95:0,27,324	0/0:4,0:1:0:0,0,0	0/0:4,0:3:1.25:0,1,3	0/1:24,2:26:21.15:311,0,21	0/1:15,0:15:71.97:74,0,72	0/1:12,2:12:40.72:109,0,41	0/0:25,0:22:50.61:0,51,510	0/1:14,1:14:32.94:173,0,33	0/0:20,0:20:52.83:0,53,496	0/0:12,0:11:30.83:0,31,366	1/1:6,2:10:26.77:244,27,0	1/1:0,4:4:6.02:77,6,0	1/1:8,0:12:28.52:227,29,0	1/1:11,4:15:1.92:226,2,0	0/0:15,0:15:39.86:0,40,427	0/0:31,0:28:64.91:0,65,615	0/0:18,0:17:46.97:0,47,444	0/0:14,0:13:35.37:0,35,371	0/0:9,0:9:21.83:0,22,160	0/0:23,0:18:36.05:0,36,311	1/1:2,7:9:11.91:150,12,0	0/1:1,11:13:28.97:30,0,29	1/1:6,4:9:23.88:240,24,0	0/1:11,0:12:21.19:37,0,21	0/0:15,0:15:39.49:0,39,418	0/0:21,0:20:44.81:0,45,572	0/0:13,0:11:26.77:0,27,282
chr10	109895652	.	AGAG	A	982.95	PASS	AB=0.625;AC=9;AF=0.161;AN=56;BaseQRankSum=6.932;DP=733;FS=6.120;HRun=0;HaplotypeScore=120.1142;InbreedingCoeff=0.8038;MQ=77.50;MQ0=6;MQRankSum=-1.278;QD=16.38;ReadPosRankSum=2.757;VQSLOD=3.0580;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:82.01:0,82,1736	0/0:8,0:8:21.07:0,21,471	0/0:42,0:21:33.98:0,34,799	0/0:91,0:55:99:0,105,1288	1/1:1,15:16:15.05:250,15,0	1/1:1,17:17:15.05:250,15,0	0/1:4,6:10:29.85:138,0,30	0/0:37,0:37:99:0,105,2215	1/1:2,8:10:27.09:449,27,0	0/0:32,0:32:93.31:0,93,1860	0/0:20,0:20:60.15:0,60,1203	0/0:15,0:15:42.14:0,42,935	0/0:25,0:25:69.23:0,69,1517	0/0:33,0:33:93.32:0,93,1987	0/0:37,0:37:99:0,99,2139	0/0:32,0:32:96.33:0,96,2135	0/0:34,0:34:64.35:0,64,1882	0/0:29,0:29:34.70:0,35,1564	0/0:20,0:20:57.20:0,57,1153	0/0:18,0:18:48.16:0,48,1015	0/0:28,1:28:78.27:0,78,1712	0/0:15,0:15:33.08:0,33,622	0/0:14,0:14:39.13:0,39,856	0/0:31,1:31:84.29:0,84,1827	1/1:0,6:6:3.01:50,3,0	0/0:42,0:42:99:0,123,2583	0/0:27,0:27:72.25:0,72,1559	0/0:6,0:6:15.02:0,15,294
chr10	109895805	.	GAGAGAGACAGAGAC	G	1147.52	PASS	AB=0.873;AC=9;AF=0.173;AN=52;BaseQRankSum=6.598;DP=824;FS=10.635;HRun=0;HaplotypeScore=182.3129;InbreedingCoeff=0.6220;MQ=38.56;MQ0=202;MQRankSum=-4.624;QD=11.14;ReadPosRankSum=-1.778;VQSLOD=1.8119;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:22:54.03:0,54,2089	0/0:11,0:6:15.05:0,15,575	./.	./.	0/1:14,4:10:0:0,0,0	1/1:5,9:12:15.05:462,15,0	1/1:12,1:8:9.57:277,10,0	0/0:52,0:10:12.04:0,12,257	0/1:12,3:8:44.41:372,0,44	0/0:36,0:25:75.26:0,75,2950	0/0:26,0:18:54.19:0,54,2209	0/0:19,0:18:42.10:0,42,1852	0/0:22,0:16:45.15:0,45,1925	0/0:27,0:24:66.23:0,66,2935	0/0:28,0:20:48.16:0,48,2251	0/1:29,1:27:13.44:13,0,3774	0/0:33,0:28:60.21:0,60,2361	0/0:17,0:14:33.11:0,33,1328	0/0:25,0:11:33.11:0,33,1321	0/0:25,0:12:33.11:0,33,1340	0/0:42,0:27:72.25:0,72,3305	0/0:27,0:16:39.13:0,39,1709	0/0:18,0:11:30.10:0,30,1008	0/0:39,0:30:59.99:0,60,2936	1/1:8,5:10:5.38:160,5,0	0/0:41,0:26:75.26:0,75,3152	0/0:33,0:20:60.21:0,60,3012	0/0:19,0:14:39.13:0,39,1943
chr10	109895842	.	GGA	G	749.79	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=7.022;DP=862;FS=4.060;HRun=0;HaplotypeScore=102.4177;InbreedingCoeff=0.9155;MQ=44.54;MQ0=190;MQRankSum=-2.285;QD=10.71;ReadPosRankSum=-2.318;VQSLOD=3.0498;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:32:66.17:0,66,1065	0/0:11,0:8:18.06:0,18,307	./.	./.	1/1:3,11:11:11.89:138,12,0	1/1:5,13:18:4.81:214,5,0	1/1:1,12:11:8.66:118,9,0	0/0:46,0:10:27.09:0,27,463	1/1:1,15:16:27.09:354,27,0	0/0:46,0:39:99:0,105,1769	0/0:28,0:22:63.21:0,63,1065	0/0:23,0:23:57.20:0,57,975	0/0:25,0:24:66.22:0,66,1092	0/0:29,0:28:81.28:0,81,1365	0/0:25,0:25:69.22:0,69,1128	0/0:44,1:44:99:0,111,1871	0/0:28,0:27:63.21:0,63,1043	0/0:14,0:14:39.13:0,39,666	0/0:27,0:18:45.15:0,45,751	0/0:25,0:21:63.22:0,63,1075	0/0:31,0:30:75.24:0,75,1243	0/0:25,0:22:60.21:0,60,1023	0/0:28,0:21:63.21:0,63,1064	0/0:29,0:28:66.68:0,67,1028	1/1:3,6:9:5.98:79,6,0	0/0:55,0:44:99:0,120,2043	0/0:31,0:29:78.24:0,78,1283	0/0:19,0:18:51.15:0,51,813
chr10	109896050	.	GACA	G	45.44	PASS	AB=1.000;AC=5;AF=0.096;AN=52;BaseQRankSum=3.618;DP=844;FS=1.807;HRun=0;HaplotypeScore=112.4757;InbreedingCoeff=0.5888;MQ=44.03;MQ0=226;MQRankSum=-2.191;QD=0.42;ReadPosRankSum=-1.808;VQSLOD=1.7919;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:37:99:0,99,2351	0/0:9,0:9:27.09:0,27,660	1/1:90,0:1:3.01:34,3,0	0/0:121,1:2:5.95:0,6,65	0/0:0,1:1:0:0,0,0	./.	0/1:5,0:5:43.35:43,0,209	0/0:57,0:34:99:0,102,2352	1/1:2,5:7:5.99:75,6,0	0/0:48,0:40:99:0,117,2807	0/0:23,0:22:39.13:0,39,922	0/0:28,0:28:84.29:0,84,2052	0/0:22,0:22:63.20:0,63,1492	0/0:20,0:19:57.20:0,57,1405	0/0:35,0:35:99:0,99,2399	0/0:35,0:35:99:0,102,2486	0/0:25,0:25:59.87:0,60,1383	0/0:19,0:19:39.01:0,39,1033	0/0:24,0:17:48.16:0,48,1129	0/0:28,0:27:78.27:0,78,1906	0/0:27,0:26:60.20:0,60,1442	0/0:23,0:23:51.16:0,51,1188	0/0:29,0:28:75.26:0,75,1729	0/0:34,0:34:87.16:0,87,2083	./.	0/0:38,0:36:99:0,108,2500	0/0:33,0:33:99:0,99,2420	0/0:13,0:13:39.13:0,39,867
chr10	109896123	.	AGAG	A	302.79	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.956;DP=791;FS=24.623;HRun=0;HaplotypeScore=102.1371;InbreedingCoeff=0.8069;MQ=45.37;MQ0=185;MQRankSum=-2.993;QD=11.65;ReadPosRankSum=-5.327;VQSLOD=0.7150;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:29:78.18:0,78,1820	0/0:17,0:17:48.16:0,48,1057	0/0:83,0:1:3.01:0,3,34	0/0:111,0:3:5.75:0,6,60	1/1:1,1:2:4.22:24,4,0	1/1:1,3:4:5.98:59,6,0	1/1:2,0:2:0.34:16,0,0	0/0:52,0:34:96.32:0,96,1923	1/1:4,5:9:23.82:178,24,0	0/0:28,0:27:78.27:0,78,1762	0/0:17,0:16:21.07:0,21,517	0/0:30,0:30:87.30:0,87,1972	0/0:33,0:33:99:0,99,2399	0/0:21,0:21:63.22:0,63,1476	0/0:43,0:42:99:0,120,2827	0/0:35,0:35:99:0,102,2219	0/0:22,1:23:54.16:0,54,1215	0/0:14,0:14:39.13:0,39,890	0/0:24,0:12:36.12:0,36,836	0/0:18,0:17:48.16:0,48,1119	0/0:33,0:31:75.23:0,75,1679	0/0:19,0:18:33.11:0,33,784	0/0:22,0:21:45.15:0,45,1042	0/0:29,0:29:81.17:0,81,1869	1/1:3,6:8:16.25:174,16,0	0/0:45,0:42:99:0,126,3022	0/0:20,0:19:57.18:0,57,1283	0/0:14,0:14:36.12:0,36,848
chr10	109896610	.	CA	C	3131.75	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.877;DP=560;FS=4.017;HRun=2;HaplotypeScore=58.8591;InbreedingCoeff=0.9976;MQ=87.28;MQ0=0;MQRankSum=-3.225;QD=34.04;ReadPosRankSum=2.006;VQSLOD=3.8350;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.21:0,81,1146	0/0:6,0:6:18.06:0,18,270	0/0:30,0:30:78.04:0,78,1120	0/0:17,0:17:45.11:0,45,635	1/1:0,14:14:36.12:467,36,0	1/1:1,21:22:57.19:739,57,0	1/1:0,19:19:57.19:740,57,0	0/0:39,0:39:99:0,117,1731	1/1:0,16:16:48.16:622,48,0	0/0:17,0:17:51.17:0,51,747	0/0:9,0:9:27.09:0,27,402	0/0:21,0:21:60.18:0,60,853	0/0:13,0:13:36.12:0,36,539	0/0:13,0:13:39.13:0,39,584	0/0:24,0:24:69.23:0,69,1024	0/0:32,0:32:96.32:0,96,1427	0/0:19,0:19:57.19:0,57,852	0/0:12,0:12:30.10:0,30,443	0/0:17,0:17:48.16:0,48,715	0/0:16,0:16:48.16:0,48,715	0/0:22,0:22:63.20:0,63,925	0/0:11,0:11:33.11:0,33,494	0/0:17,0:17:48.16:0,48,719	0/0:31,0:31:87.27:0,87,1281	1/1:0,21:21:57.19:739,57,0	0/0:35,0:35:99:0,105,1574	0/0:21,0:21:63.21:0,63,944	0/0:17,0:17:51.16:0,51,743
chr10	109897315	.	G	GT	2615.41	PASS	AB=0.961;AC=30;AF=0.536;AN=56;BaseQRankSum=-1.667;DP=518;FS=5.647;HRun=11;HaplotypeScore=135.6282;InbreedingCoeff=0.4341;MQ=47.62;MQ0=17;MQRankSum=-1.962;QD=7.19;ReadPosRankSum=-0.098;VQSLOD=1.6252;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:13,10:24:1.49:243,0,1	0/0:8,0:9:25.41:0,25,171	0/0:36,0:10:4.04:0,4,60	0/1:32,0:3:0.49:0,0,17	0/1:27,0:28:16.43:145,0,16	0/1:9,0:17:15.78:35,0,16	1/1:8,0:10:4.55:56,5,0	1/1:27,8:32:28.56:328,29,0	0/1:9,0:12:32.30:33,0,32	0/0:21,0:21:36.96:0,37,312	0/0:18,0:20:6.90:0,7,266	0/0:7,0:7:13.33:0,13,54	0/0:13,0:12:11.70:0,12,64	0/1:15,0:14:15.05:18,0,15	0/0:14,0:13:15.04:0,15,61	0/0:22,0:21:37.23:0,37,322	1/1:22,7:25:43.68:491,44,0	1/1:14,1:15:15.13:102,15,0	1/1:19,4:21:13.48:196,13,0	1/1:14,9:23:32.03:304,32,0	1/1:3,8:13:16.95:134,17,0	0/0:12,0:11:13.56:0,14,81	0/1:7,0:7:2.43:2,0,34	1/1:8,0:7:4.40:20,4,0	0/1:9,0:15:13.55:24,0,14	1/1:13,7:23:20.71:299,21,0	1/1:9,13:22:19.12:198,19,0	1/1:3,3:6:18.03:179,18,0
chr10	109897323	.	T	TTG	899.83	PASS	AB=0.874;AC=10;AF=0.179;AN=56;BaseQRankSum=6.961;DP=519;FS=0.469;HRun=0;HaplotypeScore=152.1528;InbreedingCoeff=0.5477;MQ=50.92;MQ0=19;MQRankSum=-7.288;QD=6.16;ReadPosRankSum=3.234;VQSLOD=3.0700;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:36.40:0,36,292	0/0:9,0:9:27.06:0,27,347	0/1:39,0:12:1.27:1,0,122	0/0:31,0:5:9.47:0,9,47	0/1:21,9:27:4.79:329,0,5	1/1:14,1:15:31.43:204,31,0	1/1:9,3:11:22.98:226,23,0	0/0:32,0:30:65.20:0,65,552	0/1:8,4:11:11.57:119,0,12	0/0:20,0:20:54.04:0,54,674	0/0:21,0:21:59.89:0,60,712	0/0:6,0:6:14.15:0,14,66	0/0:14,0:12:13.80:0,14,116	0/0:14,0:12:10.44:0,10,118	0/0:13,0:12:26.09:0,26,195	0/0:23,0:22:54.10:0,54,705	0/0:31,0:27:22.36:0,22,242	0/0:15,0:15:19.93:0,20,194	0/0:22,0:20:42.74:0,43,327	0/0:24,0:25:23.26:0,23,293	0/0:15,0:14:12.44:0,12,98	0/0:13,0:11:16.03:0,16,124	0/0:9,0:8:19.24:0,19,97	0/0:6,0:5:8.44:0,8,34	1/1:11,3:13:22.92:161,23,0	0/1:23,0:23:15.97:16,0,216	0/0:22,0:22:10.55:0,11,154	0/0:7,0:7:17.46:0,17,80
chr10	109897324	.	T	TG	868.94	PASS	AB=0.986;AC=17;AF=0.304;AN=56;BaseQRankSum=7.136;DP=510;FS=1.899;HRun=0;HaplotypeScore=141.7537;InbreedingCoeff=0.2681;MQ=50.99;MQ0=19;MQRankSum=-6.114;QD=3.18;ReadPosRankSum=4.019;VQSLOD=3.1215;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:3.44:3,0,200	0/0:9,0:9:27.02:0,27,338	0/1:41,0:12:1.20:1,0,117	0/0:32,0:5:4.97:0,5,32	0/1:22,4:24:4.25:310,0,4	1/1:11,2:14:32.55:204,33,0	1/1:9,1:9:19.57:165,20,0	0/1:32,0:30:8.90:9,0,263	1/1:11,0:11:3.65:145,4,0	0/0:20,0:20:53.92:0,54,637	0/0:21,0:21:55.62:0,56,655	0/0:6,0:6:15:0,15,114	0/0:14,0:12:24.58:0,25,187	0/0:14,0:12:9.89:0,10,128	0/0:13,0:12:26.39:0,26,220	0/0:21,0:20:56.81:0,57,702	0/1:30,0:26:22.95:23,0,148	0/0:15,0:15:19.38:0,19,153	0/0:21,0:20:22.85:0,23,272	0/1:25,0:25:10.70:11,0,231	0/1:15,0:14:10:10,0,40	0/0:13,0:11:20.01:0,20,199	0/0:9,0:8:18.35:0,18,151	0/0:6,0:5:8.06:0,8,44	1/1:13,0:13:17.37:134,17,0	0/0:23,0:23:7.82:0,8,194	0/1:22,0:22:13.25:13,0,126	0/1:7,0:7:8.53:9,0,13
chr10	109897327	.	GGTT	G	2657.90	PASS	AB=0.861;AC=24;AF=0.429;AN=56;BaseQRankSum=6.810;DP=503;FS=0.000;HRun=0;HaplotypeScore=146.8352;InbreedingCoeff=0.6385;MQ=51.30;MQ0=18;MQRankSum=-5.748;QD=11.87;ReadPosRankSum=-1.341;VQSLOD=2.6456;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:21.46:0,21,417	0/0:9,0:9:20.29:0,20,268	0/1:42,0:12:12.21:12,0,145	0/0:31,0:5:4.99:0,5,75	1/1:16,13:27:55.71:482,56,0	1/1:5,9:14:38.79:395,39,0	1/1:4,6:9:23.97:251,24,0	0/0:32,0:30:71.48:0,71,706	1/1:3,8:10:25.48:245,25,0	0/0:20,0:20:2.28:0,2,487	0/0:22,0:22:58.79:0,59,647	1/1:5,1:6:6.15:171,6,0	1/1:12,3:13:29.18:310,29,0	0/1:8,5:11:91.33:101,0,91	0/1:8,5:12:66.17:66,0,83	0/0:20,0:19:53.49:0,53,670	0/1:30,0:27:34.81:35,0,449	0/0:14,0:14:27.91:0,28,258	0/0:22,0:21:31.78:0,32,434	0/0:22,0:22:42.83:0,43,576	0/0:15,0:14:21.04:0,21,233	1/1:10,2:10:16.16:149,16,0	1/1:8,2:9:16.57:209,17,0	1/1:5,0:4:8.40:74,8,0	1/1:3,10:12:32.89:366,33,0	0/0:22,0:22:56.45:0,56,592	0/0:20,0:20:32.41:0,32,373	0/0:7,0:7:19.61:0,20,250
chr10	109897332	.	TTG	T	701.04	PASS	AB=0.986;AC=20;AF=0.357;AN=56;BaseQRankSum=10.512;DP=514;FS=0.435;HRun=0;HaplotypeScore=142.5100;InbreedingCoeff=0.3797;MQ=51.62;MQ0=18;MQRankSum=-8.571;QD=3.01;ReadPosRankSum=-1.203;VQSLOD=2.6622;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,2:24:16.94:17,0,477	0/0:11,0:11:24.94:0,25,415	0/0:40,0:11:8.52:0,9,125	0/1:30,0:5:2.82:3,0,47	1/1:26,0:23:44.29:195,44,0	1/1:15,0:15:24.01:149,24,0	1/1:10,0:9:17.49:80,17,0	0/0:32,1:31:6.95:0,7,589	1/1:14,0:13:22.04:107,22,0	0/0:18,0:18:50.92:0,51,704	0/0:22,0:22:53.46:0,53,795	0/1:8,0:8:19.58:20,0,40	0/1:16,0:14:7.83:8,0,54	0/1:13,0:11:1.75:2,0,88	0/0:13,0:12:3.62:0,4,120	0/0:20,0:19:50.60:0,51,795	0/1:29,1:27:99:104,0,431	0/0:15,0:15:29.98:0,30,373	0/0:23,0:22:23.15:0,23,595	0/0:21,0:21:50.54:0,51,624	0/0:16,0:15:21.12:0,21,209	0/1:15,0:13:8.83:9,0,56	0/1:13,0:12:12.37:12,0,75	1/1:4,0:3:4.31:22,4,0	1/1:14,0:13:31.72:158,32,0	0/0:22,0:22:40.21:0,40,542	0/0:19,0:19:22.10:0,22,368	0/0:8,0:8:23.99:0,24,255
chr10	109897334	.	GTTTTT	G	1742.29	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.320;DP=502;FS=10.736;HRun=8;HaplotypeScore=156.7626;InbreedingCoeff=0.9200;MQ=52.27;MQ0=17;MQRankSum=-8.194;QD=21.51;ReadPosRankSum=1.440;VQSLOD=0.0901;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:56.78:0,57,1189	0/0:11,0:11:30.06:0,30,751	0/0:36,0:11:26.84:0,27,277	0/0:30,1:5:7.63:0,8,100	1/1:18,5:23:52.47:465,52,0	1/1:1,8:16:30.83:510,31,0	1/1:5,3:9:17.76:206,18,0	0/0:29,0:27:66.03:0,66,1360	1/1:5,4:14:25.57:300,26,0	0/0:17,0:17:51.09:0,51,1241	0/0:22,0:22:56.71:0,57,1352	0/0:8,0:8:22.51:0,23,339	0/0:16,0:14:26.35:0,26,371	0/0:13,0:11:21.54:0,22,318	0/0:11,0:10:18.95:0,19,323	0/0:20,0:19:54.16:0,54,1392	0/0:30,0:27:71.40:0,71,1254	0/0:13,0:13:30.10:0,30,712	0/0:21,0:20:57.02:0,57,1325	0/0:20,0:21:57.60:0,58,1353	0/0:17,0:16:27.01:0,27,575	0/0:15,0:13:25.90:0,26,502	0/0:12,0:11:29.61:0,30,479	0/0:4,0:3:0.33:0,0,34	1/1:3,7:13:33.18:434,33,0	0/0:22,0:22:56.44:0,56,1218	0/0:18,0:18:36.04:0,36,726	0/0:8,0:8:24.08:0,24,674
chr10	109897339	.	T	TG	573.60	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.139;DP=515;FS=13.943;HRun=0;HaplotypeScore=126.7766;InbreedingCoeff=0.9058;MQ=54.41;MQ0=13;MQRankSum=-6.094;QD=6.67;ReadPosRankSum=3.824;VQSLOD=2.6553;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:59.75:0,60,640	0/0:10,0:10:30.06:0,30,396	0/0:33,0:10:19.06:0,19,157	0/0:30,0:6:4.11:0,4,54	1/1:23,3:25:22.49:234,22,0	1/1:16,0:16:28.25:150,28,0	1/1:13,0:12:6.78:90,7,0	0/0:28,0:26:71.51:0,72,786	1/1:13,1:13:18.52:117,19,0	0/0:19,0:18:51.15:0,51,668	0/0:23,0:23:62.72:0,63,762	0/0:8,0:8:20.46:0,20,224	0/0:16,0:14:27.53:0,28,337	0/0:12,0:10:26.27:0,26,255	0/0:12,0:11:23.92:0,24,221	0/0:24,0:23:37.13:0,37,716	0/0:28,0:25:69.44:0,69,658	0/0:14,0:14:32.89:0,33,387	0/0:20,0:19:54.14:0,54,702	0/0:25,0:25:61.29:0,61,703	0/0:15,0:14:26.99:0,27,299	0/0:18,0:16:34.88:0,35,412	0/0:18,0:17:43.58:0,44,486	0/0:4,0:3:3.95:0,4,44	1/1:17,0:16:27.32:151,27,0	0/0:21,0:21:52.20:0,52,594	0/0:18,0:18:36.02:0,36,396	0/0:9,0:9:27.08:0,27,352
chr10	109897830	.	G	GT	3856.27	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=1.689;DP=638;FS=6.081;HRun=1;HaplotypeScore=78.8008;InbreedingCoeff=0.9987;MQ=67.84;MQ0=1;MQRankSum=-3.548;QD=38.56;ReadPosRankSum=0.219;VQSLOD=4.0329;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.20:0,90,1159	0/0:8,0:8:24.08:0,24,335	0/0:18,0:16:40.35:0,40,503	0/0:15,0:13:33.11:0,33,450	1/1:1,24:25:66.10:981,66,0	1/1:5,20:26:72.20:1054,72,0	1/1:4,10:14:36.11:541,36,0	0/0:31,0:31:90.27:0,90,1193	1/1:1,19:20:48.16:756,48,0	0/0:33,0:33:93.29:0,93,1254	0/0:20,0:20:57.19:0,57,792	0/0:24,0:24:66.20:0,66,888	0/0:20,0:20:60.19:0,60,812	0/0:10,0:10:27.08:0,27,359	0/0:31,0:31:84.24:0,84,1105	0/0:31,0:31:84.25:0,84,1136	0/0:16,0:16:45.13:0,45,593	0/0:22,0:22:60.20:0,60,831	0/0:31,0:31:90.22:0,90,1165	0/0:30,0:30:84.25:0,84,1121	0/0:20,0:20:57.18:0,57,775	0/0:19,0:19:51.17:0,51,705	0/0:16,0:16:25.14:0,25,533	0/0:19,0:19:54.14:0,54,677	1/1:0,15:15:33.11:525,33,0	0/0:38,0:38:99:0,114,1526	0/0:30,0:30:84.27:0,84,1146	0/0:24,0:24:69.22:0,69,943
chr10	109897850	.	C	CTTT	3085.57	PASS	AB=0.955;AC=11;AF=0.196;AN=56;BaseQRankSum=7.589;DP=614;FS=2.156;HRun=11;HaplotypeScore=107.9008;InbreedingCoeff=0.8802;MQ=65.85;MQ0=1;MQRankSum=-7.318;QD=24.11;ReadPosRankSum=-4.889;VQSLOD=1.5786;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:63.10:0,63,736	0/0:10,0:10:21.04:0,21,245	0/1:20,0:17:12.65:13,0,157	0/0:14,0:12:10.73:0,11,123	1/1:12,6:22:37.35:539,37,0	1/1:8,20:30:58.43:1003,58,0	1/1:5,10:18:18.55:528,19,0	0/0:30,0:32:49.42:0,49,566	1/1:12,9:23:58.31:895,58,0	0/0:27,0:30:60.18:0,60,731	0/0:15,0:16:25.51:0,26,313	0/0:20,0:21:43.42:0,43,523	0/0:21,0:21:48.07:0,48,550	0/0:17,0:17:29.93:0,30,350	0/0:23,0:25:52.57:0,53,590	0/0:28,0:28:35.91:0,36,579	0/0:16,0:16:45.12:0,45,526	0/0:24,0:25:50.89:0,51,553	0/0:20,0:20:40.23:0,40,447	0/0:22,0:23:53.94:0,54,603	0/0:10,0:14:28.43:0,28,296	0/0:19,0:19:35.93:0,36,400	0/0:19,0:20:48.02:0,48,531	0/0:16,0:16:29.95:0,30,350	1/1:8,5:13:23.04:286,23,0	0/0:31,0:35:41.23:0,41,666	0/0:39,0:40:88.46:0,88,1019	0/0:18,0:18:39.05:0,39,435
chr10	109898678	.	G	GA	2781.57	PASS	AB=0.933;AC=11;AF=0.196;AN=56;BaseQRankSum=-8.395;DP=647;FS=21.553;HRun=10;HaplotypeScore=72.2189;InbreedingCoeff=0.8722;MQ=75.83;MQ0=0;MQRankSum=-1.791;QD=18.54;ReadPosRankSum=-0.010;VQSLOD=2.5244;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:74.32:0,74,634	0/0:10,0:10:20.96:0,21,172	0/0:16,0:13:19.37:0,19,161	0/0:24,0:23:15.15:0,15,183	1/1:5,28:37:45.09:754,45,0	1/1:4,28:33:84.50:870,85,0	1/1:3,14:19:47.80:467,48,0	0/0:41,0:41:55.64:0,56,573	1/1:7,16:23:18.35:393,18,0	0/0:23,0:23:21.92:0,22,387	0/0:12,0:12:17.93:0,18,145	0/0:22,0:22:56.91:0,57,468	0/0:22,0:22:53.90:0,54,440	0/0:13,0:13:29.96:0,30,246	0/0:33,2:35:25.21:0,25,625	0/0:17,1:19:20.98:0,21,368	0/0:24,0:24:43.19:0,43,464	0/0:26,0:26:61.35:0,61,515	0/0:21,0:21:52.71:0,53,412	0/0:26,0:26:56.90:0,57,465	0/0:22,0:22:53.93:0,54,443	0/0:15,1:16:12.96:0,13,312	0/0:8,0:8:20.97:0,21,172	0/0:15,1:16:12.92:0,13,308	1/1:5,17:24:22.48:464,22,0	0/0:32,0:32:77.87:0,78,638	0/0:30,0:32:78.95:0,79,627	0/1:12,1:14:11.20:11,0,109
chr10	109899774	.	GA	G	1625.80	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=10.157;DP=569;FS=14.989;HRun=10;HaplotypeScore=57.4282;InbreedingCoeff=0.9161;MQ=61.71;MQ0=10;MQRankSum=0.139;QD=14.14;ReadPosRankSum=1.932;VQSLOD=2.1101;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,1:40:99:0,111,1197	0/0:14,0:14:36.10:0,36,398	0/0:16,0:7:17.39:0,17,158	0/1:18,0:6:0.68:1,0,76	1/1:3,20:23:56.98:494,57,0	1/1:4,18:22:47.98:417,48,0	1/1:3,19:22:20.82:410,21,0	0/0:28,1:29:52.15:0,52,796	1/1:3,11:14:10.96:215,11,0	0/0:18,0:18:48.13:0,48,531	0/0:23,0:23:63.17:0,63,697	0/0:8,0:8:12.03:0,12,133	0/0:11,0:11:24.06:0,24,265	0/0:15,0:15:39.11:0,39,431	0/0:16,0:16:44.92:0,45,461	0/0:24,0:24:66.16:0,66,721	0/0:30,0:29:75.18:0,75,814	0/0:18,1:18:18.94:0,19,396	0/0:26,0:26:63.10:0,63,670	0/0:26,0:26:62.78:0,63,741	0/0:20,0:20:57.05:0,57,602	0/0:15,0:15:42.10:0,42,455	0/0:18,0:17:51.07:0,51,549	0/0:13,0:12:27.07:0,27,299	1/1:4,12:16:29.99:260,30,0	0/0:26,0:25:75.18:0,75,809	0/0:28,0:28:55.27:0,55,812	0/0:19,0:16:42.06:0,42,443
chr10	109901306	.	G	GC	3712.72	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.899;DP=555;FS=7.103;HRun=2;HaplotypeScore=52.7828;InbreedingCoeff=0.9833;MQ=87.61;MQ0=0;MQRankSum=-3.153;QD=38.28;ReadPosRankSum=2.315;VQSLOD=4.1508;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,1465	0/0:7,0:7:21.07:0,21,260	0/0:20,0:20:56.91:0,57,677	0/0:18,0:18:47.14:0,47,624	1/1:1,12:13:30.10:431,30,0	1/1:2,30:32:84.28:1208,84,0	1/1:1,32:33:90.30:1296,90,0	0/0:21,0:21:54.16:0,54,652	1/1:0,16:16:45.15:647,45,0	0/0:13,0:13:36.11:0,36,446	0/0:16,0:16:45.14:0,45,556	0/0:29,0:29:87.27:0,87,1077	0/0:15,0:15:45.14:0,45,556	0/0:21,0:21:60.18:0,60,734	0/0:31,0:31:93.28:0,93,1139	0/0:21,0:21:63.20:0,63,781	0/0:26,0:26:78.22:0,78,950	0/0:20,0:20:54.14:0,54,653	0/0:18,0:18:54.17:0,54,664	0/0:8,0:8:24.07:0,24,287	0/0:44,0:44:99:0,126,1547	0/0:10,0:10:24.05:0,24,283	0/0:13,0:13:33.10:0,33,409	0/0:19,0:19:51.16:0,51,631	1/1:0,3:3:9.03:130,9,0	0/0:23,0:23:69.22:0,69,855	0/0:14,0:14:42.13:0,42,521	0/0:7,0:7:21.07:0,21,260
chr10	109901773	.	TAGAGAGAG	T	52.32	PASS	AB=0.713;AC=7;AF=0.167;AN=42;BaseQRankSum=-0.859;DP=115;FS=2.509;HRun=0;HaplotypeScore=41.3089;InbreedingCoeff=0.2459;MQ=42.69;MQ0=5;MQRankSum=0.084;QD=2.38;ReadPosRankSum=-0.219;VQSLOD=1.3978;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:12.04:0,12,212	0/0:4,0:4:3.48:0,3,100	./.	0/0:11,0:2:2.22:0,2,7	0/0:0,5:5:0:0,0,0	0/0:1,0:1:3.01:0,3,31	1/1:0,0:2:3.01:33,3,0	0/1:7,1:6:14.66:66,0,15	./.	0/0:9,0:9:24.08:0,24,503	0/0:2,0:2:3.01:0,3,50	0/0:2,0:2:3.37:0,3,9	./.	./.	0/0:2,0:2:3.63:0,4,9	0/0:4,0:4:6.88:0,7,20	0/0:14,0:13:22.83:0,23,435	0/0:6,0:6:8.98:0,9,165	0/0:2,0:2:4.72:0,5,15	0/0:1,0:4:2.96:0,3,19	./.	./.	./.	1/1:1,0:2:3.01:36,3,0	0/1:2,0:5:0:0,0,0	0/1:2,3:5:5.83:18,0,6	0/0:1,0:1:3.01:0,3,50	0/0:10,0:7:18.02:0,18,541
chr10	109902211	.	A	AAC	3579.62	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-8.030;DP=742;FS=0.446;HRun=0;HaplotypeScore=105.8409;InbreedingCoeff=0.9986;MQ=67.10;MQ0=0;MQRankSum=0.158;QD=34.09;ReadPosRankSum=2.124;VQSLOD=6.0531;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,105,1596	0/0:17,0:17:41.74:0,42,597	0/0:18,0:14:27.98:0,28,309	0/0:16,0:13:35.49:0,35,361	1/1:0,17:20:47.81:703,48,0	1/1:1,15:17:23.64:397,24,0	1/1:0,27:29:68.81:1173,69,0	0/0:39,0:39:99:0,114,1381	1/1:0,20:21:30.06:489,30,0	0/0:42,0:42:99:0,123,1506	0/0:19,0:19:54.13:0,54,699	0/0:28,0:28:84.23:0,84,1094	0/0:24,0:24:72.23:0,72,977	0/0:27,0:27:81.18:0,81,1038	0/0:48,0:48:99:0,144,1869	0/0:41,0:41:99:0,113,1359	0/0:33,0:33:91.72:0,92,1131	0/0:24,0:24:67.59:0,68,831	0/0:30,0:30:87.03:0,87,972	0/0:27,0:27:72.14:0,72,928	0/0:29,0:28:81.14:0,81,995	0/0:18,0:18:53.19:0,53,680	0/0:19,0:19:57.06:0,57,726	0/0:29,0:29:87.20:0,87,1133	1/1:5,11:18:50.98:818,51,0	0/0:34,0:34:99:0,102,1305	0/0:21,0:20:43.31:0,43,779	0/0:8,0:8:23.95:0,24,258
chr10	109905340	.	AG	A	2940.64	PASS	AB=0.876;AC=36;AF=0.643;AN=56;BaseQRankSum=-1.609;DP=577;FS=28.739;HRun=12;HaplotypeScore=70.6274;InbreedingCoeff=0.5262;MQ=62.73;MQ0=3;MQRankSum=-0.388;QD=6.48;ReadPosRankSum=6.529;VQSLOD=-0.0025;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,15:34:24.70:174,25,0	0/0:9,0:9:3:0,3,25	0/1:21,0:17:38.15:38,0,59	0/1:19,0:17:58.05:58,0,84	0/0:13,0:13:8.79:0,9,57	0/0:13,0:16:6.43:0,6,50	0/0:21,0:35:14.32:0,14,99	1/1:10,2:14:7.98:52,8,0	0/0:20,0:20:24.97:0,25,165	0/0:12,1:13:8.60:0,9,56	0/0:6,0:6:2.99:0,3,24	1/1:5,15:20:23.86:179,24,0	1/1:11,16:27:29.84:230,30,0	1/1:11,12:23:13.82:237,14,0	1/1:19,16:36:25.36:369,25,0	0/1:22,1:23:13.74:14,0,203	1/1:13,7:22:33.93:241,34,0	1/1:7,7:16:18.97:128,19,0	1/1:10,5:15:14.91:116,15,0	1/1:9,3:13:4.99:29,5,0	1/1:31,20:53:20.98:371,21,0	1/1:12,5:18:12.71:71,13,0	1/1:8,1:9:3.87:26,4,0	1/1:18,19:37:58.69:441,59,0	0/0:11,0:11:8.87:0,9,58	1/1:12,4:17:13.97:97,14,0	1/1:11,14:28:9.48:237,9,0	0/1:1,3:6:8.63:25,0,9
chr10	109909863	.	T	TCAAAG	5534.25	PASS	AB=0.987;AC=16;AF=0.286;AN=56;BaseQRankSum=-6.907;DP=650;FS=0.488;HRun=0;HaplotypeScore=144.0482;InbreedingCoeff=0.8113;MQ=72.96;MQ0=7;MQRankSum=0.139;QD=22.96;ReadPosRankSum=-1.810;VQSLOD=3.8278;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:93.26:0,93,1604	0/0:12,0:12:27.08:0,27,462	0/1:36,0:28:16.39:16,0,187	0/1:63,0:45:65.19:65,0,236	0/0:9,0:24:45.07:0,45,506	0/0:2,0:24:48.14:0,48,559	0/0:9,0:14:18.04:0,18,199	0/0:39,0:39:51.10:0,51,677	0/0:7,0:16:18.05:0,18,208	0/0:16,0:16:30.09:0,30,517	0/0:14,0:14:27.02:0,27,453	1/1:7,18:27:36.12:1016,36,0	1/1:6,9:15:18.06:495,18,0	1/1:3,12:18:27.09:762,27,0	1/1:9,13:22:24.08:677,24,0	0/0:30,0:30:60.13:0,60,978	0/0:32,0:32:75.21:0,75,1265	0/0:14,0:14:36.12:0,36,657	0/0:26,0:26:30.08:0,30,490	0/0:13,0:13:24.04:0,24,403	0/0:26,0:26:75.13:0,75,1237	1/1:11,9:20:21.07:593,21,0	1/1:6,8:14:27.09:724,27,0	1/1:3,21:24:41.88:1185,42,0	0/0:1,0:16:30.09:0,30,349	0/0:33,0:33:81.24:0,81,1384	0/0:19,0:18:30.03:0,30,505	0/0:3,0:2:8.97:0,9,98
chr10	109910177	.	G	GA	13090.78	PASS	AB=0.903;AC=54;AF=0.964;AN=56;BaseQRankSum=-0.933;DP=761;FS=3.225;HRun=2;HaplotypeScore=161.8759;InbreedingCoeff=-0.0374;MQ=74.35;MQ0=0;MQRankSum=-2.871;QD=17.20;ReadPosRankSum=5.678;VQSLOD=5.0752;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:77.08:518,77,0	1/1:16,0:16:47.58:347,48,0	0/1:20,1:21:71.44:158,0,71	0/1:18,4:23:99:181,0,132	1/1:27,0:27:68.51:514,69,0	1/1:32,0:32:86.28:633,86,0	1/1:30,0:30:84.70:586,85,0	1/1:38,0:38:99:599,100,0	1/1:27,0:28:83:594,83,0	1/1:35,0:35:96.15:552,96,0	1/1:23,0:23:59.23:394,59,0	1/1:27,0:27:74.52:505,75,0	1/1:20,0:20:53.32:361,53,0	1/1:18,0:18:50.39:347,50,0	1/1:40,0:39:99:673,101,0	1/1:31,0:31:59.99:512,60,0	1/1:29,0:29:80.02:537,80,0	1/1:16,0:16:38.55:263,39,0	1/1:32,0:32:94.36:615,94,0	1/1:31,0:31:83.22:586,83,0	1/1:40,0:40:85.59:677,86,0	1/1:28,0:28:48.50:480,49,0	1/1:29,0:29:80.14:555,80,0	1/1:32,0:32:34.32:446,34,0	1/1:18,0:18:50.58:374,51,0	1/1:29,0:29:49.67:425,50,0	1/1:28,0:28:74.23:519,74,0	1/1:10,0:10:17.88:140,18,0
chr10	109910212	.	GA	G	1898.23	PASS	AB=0.900;AC=18;AF=0.321;AN=56;BaseQRankSum=3.766;DP=801;FS=5.358;HRun=13;HaplotypeScore=155.4898;InbreedingCoeff=0.3227;MQ=71.91;MQ0=1;MQRankSum=-2.879;QD=5.70;ReadPosRankSum=1.027;VQSLOD=1.1749;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,2:31:37.10:0,37,650	0/0:13,0:14:1.30:0,1,205	0/1:19,3:17:27.24:70,0,27	0/1:23,2:24:32.86:33,0,152	1/1:11,15:28:30.29:292,30,0	1/1:7,18:26:58.59:419,59,0	1/1:7,21:29:6.08:362,6,0	0/0:43,0:44:70.69:0,71,649	1/1:10,25:36:69.10:574,69,0	0/0:41,3:47:15.30:0,15,600	0/1:28,1:29:1.11:1,0,418	0/0:26,1:28:28.30:0,28,440	0/1:18,2:20:1.79:2,0,292	0/1:17,3:20:14.72:15,0,324	0/0:41,3:44:45.17:0,45,866	0/1:26,3:30:24.66:25,0,412	0/0:28,1:30:33.25:0,33,458	0/1:10,2:12:21.76:22,0,99	0/0:27,3:33:8.31:0,8,537	0/0:31,3:33:3.29:0,3,478	0/0:19,0:20:38.88:0,39,355	0/0:33,1:36:56.71:0,57,652	0/0:25,1:26:34.88:0,35,493	0/0:25,1:27:41.90:0,42,543	1/1:6,11:17:29.77:219,30,0	0/1:31,5:38:43.08:43,0,505	0/0:32,3:36:21.13:0,21,651	0/0:16,0:16:36.93:0,37,347
chr10	109910680	.	CACAT	C	3421.34	PASS	AB=0.600;AC=9;AF=0.161;AN=56;BaseQRankSum=11.343;DP=1133;FS=0.957;HRun=0;HaplotypeScore=228.5290;InbreedingCoeff=0.8885;MQ=58.97;MQ0=3;MQRankSum=-5.936;QD=23.43;ReadPosRankSum=-1.512;VQSLOD=2.9929;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:90.72:0,91,2086	0/0:14,0:14:36.11:0,36,846	0/0:35,0:27:60.55:0,61,1268	0/0:39,0:26:55.45:0,55,1091	1/1:3,25:28:17.55:283,18,0	1/1:5,27:32:51.16:850,51,0	1/1:10,15:25:33.58:564,34,0	0/0:42,0:42:99:0,99,2271	0/1:13,26:39:6.98:1022,0,7	0/0:59,0:59:99:0,154,3741	0/0:32,0:32:84.25:0,84,1979	0/0:55,0:55:99:0,141,3577	0/0:45,0:45:99:0,123,2943	0/0:48,0:48:99:0,126,3060	0/0:77,0:77:99:0,199,4802	0/0:68,0:68:99:0,169,4104	0/0:18,0:18:35.89:0,36,855	0/0:32,0:32:47.77:0,48,1650	0/0:21,0:20:54.19:0,54,1345	0/0:51,0:51:99:0,141,3563	0/0:77,0:77:99:0,205,5047	0/0:37,0:37:96.33:0,96,2395	0/0:31,0:31:78.27:0,78,1970	0/0:26,0:26:48.16:0,48,1189	1/1:5,17:22:42.13:702,42,0	0/0:70,0:70:99:0,190,4704	0/0:48,0:48:99:0,132,3231	0/0:14,0:14:27.09:0,27,686
chr10	109910712	.	CAT	C	4138.48	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=15.078;DP=1109;FS=0.000;HRun=0;HaplotypeScore=179.7852;InbreedingCoeff=0.9705;MQ=60.83;MQ0=2;MQRankSum=-6.589;QD=28.94;ReadPosRankSum=-5.418;VQSLOD=2.7306;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:53.66:0,54,1639	0/0:18,0:18:54.18:0,54,997	0/0:34,0:28:75.15:0,75,1309	0/0:37,1:27:56.28:0,56,929	1/1:1,32:33:41.89:616,42,0	1/1:3,32:35:77.96:1137,78,0	1/1:1,26:27:57.18:870,57,0	0/0:50,0:50:99:0,147,2589	1/1:5,24:29:5.06:847,5,0	0/0:64,0:64:99:0,177,3377	0/0:40,0:40:99:0,117,2144	0/0:58,0:58:99:0,175,3217	0/0:39,0:39:99:0,117,2168	0/0:45,0:45:99:0,132,2463	0/0:67,0:67:99:0,199,3590	0/0:69,0:69:99:0,202,3692	0/0:15,0:15:38.90:0,39,701	0/0:30,0:30:78.84:0,79,1517	0/0:17,0:17:51.10:0,51,803	0/0:48,0:48:99:0,144,2563	0/0:81,0:81:99:0,241,4489	0/0:38,0:38:99:0,111,1981	0/0:29,0:29:87.28:0,87,1625	0/0:23,1:24:56.97:0,57,1033	1/1:4,15:19:48.12:669,48,0	0/0:54,0:54:99:0,156,2756	0/0:49,0:49:99:0,147,2607	0/0:22,0:22:60.21:0,60,1137
chr10	109913254	.	G	GAA	5728.49	PASS	AB=0.611;AC=29;AF=0.518;AN=56;BaseQRankSum=-3.681;DP=482;FS=3.324;HRun=12;HaplotypeScore=70.1177;InbreedingCoeff=0.5910;MQ=59.28;MQ0=4;MQRankSum=-2.716;QD=17.20;ReadPosRankSum=1.333;VQSLOD=4.0552;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,44:54:99:1327,101,0	0/0:9,0:10:17.95:0,18,159	0/0:13,0:9:20.47:0,20,162	0/0:7,0:4:4.25:0,4,29	0/0:13,0:17:23.35:0,23,237	0/0:18,0:20:27.29:0,27,339	0/0:13,0:13:23.90:0,24,220	1/1:6,13:23:53.20:650,53,0	0/0:16,0:16:32.98:0,33,305	0/0:8,0:8:11.91:0,12,111	0/0:6,0:7:5.86:0,6,102	0/1:6,0:12:9.30:48,0,9	0/1:2,0:10:9.79:34,0,10	1/1:3,0:10:17.72:64,18,0	1/1:3,1:17:16.88:92,17,0	0/0:20,0:20:51.03:0,51,471	1/1:7,30:41:74.73:1005,75,0	1/1:6,18:24:39.13:547,39,0	1/1:3,12:17:37.39:448,37,0	1/1:6,9:16:28.45:311,28,0	1/1:5,12:16:23.57:303,24,0	0/1:4,1:11:14.78:22,0,15	1/1:4,0:15:20.47:89,20,0	0/1:3,1:12:27.55:64,0,28	0/0:18,0:18:38.87:0,39,408	1/1:6,9:18:30.08:389,30,0	1/1:9,8:18:2.24:198,2,0	0/1:6,6:13:12.72:140,0,13
chr10	109914117	.	GA	G	907.91	PASS	AB=0.824;AC=18;AF=0.321;AN=56;BaseQRankSum=3.253;DP=620;FS=1.351;HRun=16;HaplotypeScore=86.2343;InbreedingCoeff=0.0550;MQ=68.52;MQ0=2;MQRankSum=2.067;QD=2.69;ReadPosRankSum=4.127;VQSLOD=-0.1902;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:40.29:0,40,428	0/0:7,1:9:2.93:0,3,126	0/1:15,0:5:9.06:9,0,30	0/1:16,2:16:21.99:22,0,27	0/0:9,0:20:47.87:0,48,289	0/0:11,0:26:21.08:0,21,123	0/0:12,0:21:28.28:0,28,153	0/1:23,4:28:28.95:29,0,233	0/0:10,0:23:42.85:0,43,232	0/0:21,1:23:25.08:0,25,189	0/0:10,0:11:3.36:0,3,127	1/1:7,7:14:13.51:76,14,0	0/1:12,5:22:34.40:125,0,34	1/1:15,9:24:30.13:207,30,0	0/1:14,17:31:43.39:152,0,43	0/1:33,7:41:10.53:11,0,518	0/1:21,8:30:51.93:52,0,276	0/1:20,3:24:0.84:1,0,273	0/0:27,0:24:12.66:0,13,200	0/0:26,1:28:34.81:0,35,406	0/0:21,3:24:2.54:0,3,334	0/1:13,4:17:5.45:75,0,5	0/1:7,8:16:2.38:81,0,2	1/1:6,11:20:35.28:195,35,0	0/0:3,1:12:5.68:0,6,28	0/0:28,2:31:5.63:0,6,342	0/1:21,1:22:0.72:1,0,173	0/1:12,2:15:37.82:38,0,130
chr10	109914270	.	CA	C	1939.23	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.309;DP=546;FS=7.036;HRun=8;HaplotypeScore=56.1540;InbreedingCoeff=0.9792;MQ=63.67;MQ0=4;MQRankSum=1.178;QD=21.55;ReadPosRankSum=0.410;VQSLOD=3.9088;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.21:0,69,833	0/0:5,0:5:9.03:0,9,109	0/0:17,0:12:16.99:0,17,181	0/0:22,0:13:17.56:0,18,207	1/1:1,22:23:60.09:579,60,0	1/1:2,20:22:57.09:550,57,0	1/1:2,18:20:42.06:405,42,0	0/0:28,0:28:63.18:0,63,749	1/1:1,14:15:42.07:406,42,0	0/0:21,0:20:57.17:0,57,687	0/0:29,0:29:78.23:0,78,930	0/0:12,0:12:33.07:0,33,383	0/0:17,0:17:51.16:0,51,616	0/0:18,0:18:48.15:0,48,577	0/0:15,0:15:39.12:0,39,471	0/0:29,0:29:87.27:0,87,1050	0/0:34,0:34:87.72:0,88,1037	0/0:25,0:25:72.22:0,72,868	0/0:20,0:20:57.17:0,57,689	0/0:17,0:17:48.15:0,48,579	0/0:14,0:15:35.98:0,36,411	0/0:16,0:16:42.13:0,42,507	0/0:19,0:19:51.14:0,51,604	0/0:18,0:18:48.15:0,48,580	1/1:3,7:10:18.02:174,18,0	0/0:24,0:24:54.17:0,54,651	0/0:21,0:21:57.16:0,57,677	0/0:8,0:8:21.06:0,21,254
chr10	109914385	.	G	GA	1023.26	PASS	AB=0.749;AC=8;AF=0.143;AN=56;BaseQRankSum=8.598;DP=574;FS=1.205;HRun=10;HaplotypeScore=80.1529;InbreedingCoeff=0.4000;MQ=60.87;MQ0=11;MQRankSum=-2.447;QD=8.25;ReadPosRankSum=-2.174;VQSLOD=2.0414;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:81.30:0,81,665	0/0:7,0:6:8.98:0,9,74	0/1:22,0:13:17.84:18,0,62	0/0:26,0:8:10.10:0,10,47	0/1:20,9:28:14.49:227,0,14	1/1:7,5:11:24.06:256,24,0	0/1:10,11:22:13.44:243,0,13	0/0:27,0:26:47.85:0,48,393	0/1:10,5:16:26.70:175,0,27	0/0:18,0:18:28.86:0,29,216	0/0:14,0:14:26.95:0,27,220	0/0:9,0:9:20.97:0,21,172	0/0:18,0:19:40.99:0,41,326	0/0:12,0:12:17.91:0,18,147	0/0:17,0:18:34.93:0,35,268	0/0:16,0:17:37.95:0,38,297	0/0:52,0:53:99:0,126,1035	0/0:19,0:20:34.10:0,34,299	0/0:11,0:11:22.76:0,23,174	0/0:20,0:21:7.61:0,8,246	0/0:15,0:15:23.94:0,24,197	0/0:17,0:17:29.93:0,30,246	0/0:17,0:17:32.91:0,33,268	0/0:21,0:21:50.15:0,50,400	1/1:10,6:16:23.55:251,24,0	0/0:23,0:23:49.93:0,50,396	0/0:23,0:23:50.93:0,51,419	0/0:16,0:16:24.97:0,25,178
chr10	109914410	.	AC	A	2393.69	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.542;DP=631;FS=1.992;HRun=4;HaplotypeScore=79.9083;InbreedingCoeff=0.9850;MQ=82.65;MQ0=5;MQRankSum=-2.098;QD=24.43;ReadPosRankSum=-0.617;VQSLOD=2.3127;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:87.25:0,87,1102	0/0:5,0:5:12.03:0,12,144	0/0:70,0:40:76.60:0,77,781	0/0:58,0:28:51.90:0,52,438	1/1:12,19:29:71.47:750,71,0	1/1:9,7:16:30.76:427,31,0	1/1:12,12:24:55.16:611,55,0	0/0:33,0:34:86.98:0,87,1009	1/1:5,7:12:11.94:280,12,0	0/0:21,0:21:63.15:0,63,774	0/0:9,0:9:27.08:0,27,342	0/0:14,0:14:39.09:0,39,469	0/0:12,0:12:36.11:0,36,458	0/0:15,0:15:42.10:0,42,520	0/0:20,0:19:60.10:0,60,698	0/0:17,0:17:51.13:0,51,629	0/0:45,0:45:99:0,120,1439	0/0:23,0:23:59.93:0,60,673	0/0:19,0:19:57.12:0,57,664	0/0:20,0:20:56.83:0,57,702	0/0:12,0:11:33.07:0,33,402	0/0:15,0:15:42.04:0,42,501	0/0:18,0:18:44.76:0,45,517	0/0:14,0:14:36.12:0,36,473	1/1:3,12:14:42.13:499,42,0	0/0:22,0:20:63.17:0,63,776	0/0:20,0:20:60.16:0,60,741	0/0:16,0:16:45.15:0,45,591
chr10	109915442	.	CGA	C	545.32	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=6.333;DP=374;FS=0.000;HRun=0;HaplotypeScore=59.5470;InbreedingCoeff=0.7512;MQ=62.61;MQ0=2;MQRankSum=1.286;QD=8.26;ReadPosRankSum=0.842;VQSLOD=2.8902;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:36.07:0,36,422	0/0:12,0:12:36.01:0,36,509	0/0:17,0:10:8.58:0,9,100	0/0:16,0:7:1.96:0,2,59	1/1:12,1:13:27.21:160,27,0	1/1:12,2:13:20.82:220,21,0	1/1:15,1:16:36.97:234,37,0	0/0:21,0:20:50.87:0,51,588	0/1:9,0:8:4.44:36,0,4	0/0:17,0:17:47.68:0,48,649	0/0:13,0:13:36.01:0,36,510	0/0:8,0:8:21.07:0,21,354	0/0:3,0:1:3.01:0,3,50	0/0:11,0:10:29.91:0,30,409	0/0:14,0:13:36.04:0,36,532	0/0:9,0:9:21.07:0,21,355	0/0:19,0:19:42.05:0,42,490	0/0:17,0:15:37.29:0,37,435	0/0:16,0:15:45.10:0,45,506	0/0:7,0:7:15.03:0,15,182	0/0:8,0:8:6.55:0,7,99	0/0:17,0:17:42.01:0,42,590	0/0:7,0:6:18.06:0,18,301	0/0:7,0:7:20.81:0,21,251	1/1:14,0:13:8.54:52,9,0	0/0:26,0:24:62.98:0,63,621	0/0:15,0:14:21:0,21,247	0/0:6,0:5:8.32:0,8,121
chr10	109915444	.	AG	A	1371.14	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=3.532;DP=379;FS=0.546;HRun=1;HaplotypeScore=53.9098;InbreedingCoeff=0.7868;MQ=64.40;MQ0=2;MQRankSum=2.140;QD=19.04;ReadPosRankSum=-1.097;VQSLOD=3.3989;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:35.83:0,36,282	0/0:13,0:13:35.96:0,36,393	0/0:20,0:11:9.23:0,9,70	0/0:16,0:7:0.37:0,0,48	1/1:1,13:14:32.94:382,33,0	1/1:8,6:13:35.66:368,36,0	1/1:7,9:16:41.96:459,42,0	0/0:21,0:20:43.73:0,44,417	1/1:5,5:9:21.35:220,21,0	0/0:19,0:19:30.79:0,31,492	0/0:13,0:13:35.95:0,36,393	0/0:7,0:7:21.07:0,21,263	0/0:4,0:2:2.97:0,3,37	0/0:11,0:10:29.91:0,30,317	0/0:14,0:13:36.02:0,36,405	0/0:9,0:9:21.03:0,21,264	0/0:19,0:19:41.79:0,42,338	0/0:16,0:15:27.47:0,27,269	0/0:17,0:16:35.65:0,36,343	0/0:8,0:8:11.43:0,11,120	0/1:7,0:7:2.95:3,0,59	0/0:16,0:17:41.15:0,41,424	0/0:8,0:7:18.02:0,18,223	0/0:7,0:7:16.73:0,17,169	1/1:1,10:10:9.02:108,9,0	0/0:24,0:22:61.35:0,61,508	0/0:16,0:15:20.70:0,21,162	0/0:6,0:5:7.79:0,8,78
chr10	109915445	.	G	GAAA	3169.83	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-4.567;DP=401;FS=4.146;HRun=13;HaplotypeScore=74.5129;InbreedingCoeff=0.7008;MQ=64.25;MQ0=2;MQRankSum=-3.552;QD=15.24;ReadPosRankSum=-2.082;VQSLOD=1.8838;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,13:22:24.08:407,24,0	0/0:13,0:13:26.84:0,27,277	0/1:19,0:11:21.28:21,0,39	0/0:15,0:6:0.90:0,1,28	0/0:15,0:15:26.19:0,26,157	0/0:14,0:13:2.60:0,3,143	0/0:16,0:16:28.74:0,29,171	1/1:16,8:24:3.71:410,4,0	0/0:10,0:9:14.42:0,14,93	0/0:17,0:18:32.71:0,33,334	0/0:13,0:13:23.89:0,24,258	0/1:8,0:8:13.77:14,0,202	0/1:4,0:2:0:0,0,0	0/0:11,0:10:17.94:0,18,194	0/0:15,0:14:26.93:0,27,290	0/0:9,0:9:20.98:0,21,226	1/1:8,10:21:27.07:436,27,0	1/1:10,7:20:33.07:503,33,0	1/1:6,10:19:39.03:510,39,0	1/1:4,4:10:13.57:175,14,0	1/1:4,1:7:7.27:106,7,0	0/0:16,0:16:20.86:0,21,245	0/0:9,0:8:17.92:0,18,194	0/0:5,0:7:17.88:0,18,164	0/0:12,0:11:5.75:0,6,34	1/1:17,6:26:35.44:460,35,0	1/1:5,10:16:17.96:246,18,0	1/1:4,2:6:7.77:81,8,0
chr10	109916263	.	A	AAG	1849.42	PASS	AB=0.933;AC=19;AF=0.365;AN=52;BaseQRankSum=7.659;DP=654;FS=0.000;HRun=0;HaplotypeScore=102.9815;InbreedingCoeff=0.6205;MQ=47.33;MQ0=33;MQRankSum=4.149;QD=6.80;ReadPosRankSum=-3.339;VQSLOD=2.6050;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:21:42.12:0,42,512	0/0:13,0:12:33.09:0,33,396	./.	./.	1/1:10,19:25:14.63:165,15,0	0/1:19,6:19:49.84:224,0,50	1/1:13,0:12:6.02:89,6,0	0/0:41,0:29:57.13:0,57,669	0/1:17,0:17:27.18:79,0,27	0/0:33,0:32:72.12:0,72,884	0/0:21,0:20:36.11:0,36,458	1/1:24,0:24:35.87:216,36,0	1/1:21,0:21:36.53:246,37,0	1/1:12,0:11:18.96:119,19,0	0/1:22,0:21:2.08:130,0,2	0/0:24,0:23:48.10:0,48,579	0/0:32,0:31:27.39:0,27,638	0/0:28,0:28:69.18:0,69,857	0/0:22,0:15:40.34:0,40,474	0/0:35,0:35:66.53:0,67,770	0/0:11,0:11:33.05:0,33,388	1/1:22,0:22:32.26:167,32,0	0/1:24,0:24:6.97:83,0,7	1/1:27,0:23:11.67:252,12,0	0/1:30,6:25:7.62:271,0,8	0/0:27,0:26:75.22:0,75,913	0/0:40,0:33:72.21:0,72,880	0/0:23,0:23:63.20:0,63,798
chr10	109917079	.	TA	T	1318.43	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.620;DP=562;FS=2.467;HRun=9;HaplotypeScore=63.8234;InbreedingCoeff=0.9604;MQ=63.90;MQ0=6;MQRankSum=-10.349;QD=15.51;ReadPosRankSum=4.293;VQSLOD=3.9754;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:93.28:0,93,1073	0/0:11,0:11:27.08:0,27,311	0/0:12,0:9:11.62:0,12,138	0/0:10,1:9:5.37:0,5,34	1/1:1,16:16:32.97:292,33,0	1/1:0,13:13:33:293,33,0	1/1:4,10:13:21:189,21,0	0/0:26,0:26:51.12:0,51,573	1/1:7,16:23:31.94:364,32,0	0/0:25,0:24:63.08:0,63,689	0/0:18,0:18:42.12:0,42,485	0/0:20,0:20:45.13:0,45,519	0/0:18,0:18:48.14:0,48,554	0/0:13,0:13:39.12:0,39,450	0/0:17,0:17:45.13:0,45,519	0/0:20,0:20:54.63:0,55,624	0/0:41,0:38:90.20:0,90,1022	0/0:24,0:23:60.18:0,60,692	0/0:23,0:23:59.53:0,60,657	0/0:24,0:23:54.16:0,54,623	0/0:26,0:26:62.20:0,62,656	0/0:13,0:13:30.09:0,30,344	0/0:20,0:20:38.61:0,39,421	0/0:23,0:22:51.11:0,51,574	1/1:4,14:17:39.02:354,39,0	0/0:24,0:22:63.10:0,63,698	0/0:26,0:25:51.15:0,51,588	0/0:5,0:5:14.98:0,15,156
chr10	109917209	.	AAAACAAAAC	A	2160.71	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=-0.428;DP=638;FS=0.462;HRun=0;HaplotypeScore=197.9475;InbreedingCoeff=0.7159;MQ=45.42;MQ0=38;MQRankSum=-4.492;QD=11.49;ReadPosRankSum=-5.725;VQSLOD=0.7355;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:29:62.88:0,63,1654	0/0:13,0:12:21.98:0,22,408	0/0:19,0:8:0.75:0,1,342	0/1:34,0:5:29.58:30,0,77	0/0:21,0:18:17.11:0,17,278	0/0:18,0:17:6.79:0,7,181	0/0:16,0:13:2.80:0,3,194	0/0:30,0:28:77.10:0,77,1583	0/0:24,0:22:51.28:0,51,446	0/0:38,0:35:83.14:0,83,2238	0/0:26,0:24:38.57:0,39,1191	1/1:6,16:20:5.65:100,6,0	1/1:12,0:10:23.87:279,24,0	1/1:14,0:13:17.67:192,18,0	1/1:5,21:25:13.22:154,13,0	0/0:21,0:20:38.84:0,39,967	0/0:26,0:23:49.86:0,50,1391	0/0:28,0:26:72.24:0,72,2224	0/0:24,0:22:66.12:0,66,1893	0/0:18,0:17:13.29:0,13,983	0/0:16,0:11:30.09:0,30,725	1/1:13,3:16:33.03:691,33,0	1/1:17,2:19:23.77:346,24,0	1/1:19,1:19:21.65:529,22,0	0/1:25,0:22:31.46:31,0,231	0/0:38,0:36:92.74:0,93,2546	0/0:25,0:25:63.65:0,64,1972	0/0:13,0:12:33.11:0,33,1102
chr10	109917214	.	A	AAAC	4912.57	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.619;DP=640;FS=3.925;HRun=0;HaplotypeScore=144.5121;InbreedingCoeff=0.8696;MQ=48.33;MQ0=32;MQRankSum=-9.733;QD=45.49;ReadPosRankSum=4.671;VQSLOD=6.6055;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:32:66.04:0,66,994	0/0:13,0:12:25.80:0,26,316	0/0:20,0:10:2.83:0,3,267	0/0:31,0:6:11.92:0,12,166	1/1:6,16:19:54.18:979,54,0	1/1:5,13:17:51.17:968,51,0	1/1:8,9:14:1.60:557,2,0	0/0:31,0:29:72.55:0,73,1068	1/1:7,17:23:60.67:1237,61,0	0/0:38,0:36:92.12:0,92,1395	0/0:25,0:23:45.73:0,46,593	0/0:20,0:19:5.37:0,5,40	0/0:14,0:12:22.44:0,22,223	0/0:17,0:16:20.31:0,20,206	0/0:26,0:25:14.67:0,15,112	0/0:22,0:21:42.13:0,42,663	0/0:25,0:22:42.08:0,42,704	0/0:30,0:28:75.24:0,75,1217	0/0:24,0:22:63.21:0,63,1027	0/0:17,0:17:45.14:0,45,657	0/0:16,0:12:33.11:0,33,531	0/0:9,0:15:26.93:0,27,257	0/0:12,0:19:24.83:0,25,207	0/0:19,0:18:38.72:0,39,422	1/1:12,15:24:63.16:1171,63,0	0/0:37,0:35:92.98:0,93,1446	0/0:24,0:24:63.13:0,63,1017	0/0:13,0:12:33.11:0,33,556
chr10	109917215	.	A	AAC	2210.75	PASS	AB=0.850;AC=9;AF=0.161;AN=56;BaseQRankSum=11.868;DP=633;FS=5.385;HRun=0;HaplotypeScore=142.8067;InbreedingCoeff=0.8252;MQ=49.77;MQ0=29;MQRankSum=-10.274;QD=20.28;ReadPosRankSum=4.998;VQSLOD=3.9577;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:32:69.01:0,69,946	0/0:13,0:12:25.85:0,26,320	0/0:21,0:11:2.71:0,3,240	0/0:31,0:6:11.98:0,12,157	1/1:21,1:19:56.72:450,57,0	1/1:15,3:17:50.98:458,51,0	0/1:14,3:14:4.21:295,0,4	0/0:29,0:27:75.90:0,76,1027	1/1:22,2:23:53.40:549,53,0	0/0:36,0:34:94.96:0,95,1323	0/0:25,0:23:50.52:0,51,601	0/0:20,0:19:5.49:0,5,34	0/0:13,0:12:24.31:0,24,226	0/0:17,0:16:21.66:0,22,194	0/0:25,0:24:11.86:0,12,92	0/0:22,0:21:42.13:0,42,619	0/0:25,0:22:42.07:0,42,637	0/0:29,0:28:78.23:0,78,1133	0/0:22,0:21:63.21:0,63,951	0/0:17,0:17:46.02:0,46,597	0/0:16,0:12:33.11:0,33,505	0/0:14,0:15:26.37:0,26,200	0/0:19,0:19:25.28:0,25,199	0/0:19,0:18:38.70:0,39,380	1/1:24,4:26:65.98:622,66,0	0/0:37,0:35:93.19:0,93,1346	0/0:24,0:24:63.13:0,63,944	0/0:13,0:12:33.11:0,33,504
chr10	109917218	.	C	CA	2160.90	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=11.658;DP=600;FS=5.632;HRun=8;HaplotypeScore=126.4240;InbreedingCoeff=0.7829;MQ=52.58;MQ0=22;MQRankSum=-9.805;QD=7.66;ReadPosRankSum=2.727;VQSLOD=1.0361;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:32:68.84:0,69,607	0/0:12,0:11:17.66:0,18,138	0/1:21,0:12:11.83:12,0,199	0/1:26,0:6:21.81:22,0,71	1/1:20,0:19:26.17:88,26,0	1/1:14,0:17:33.10:117,33,0	1/1:14,0:15:4.50:71,4,0	0/0:27,0:25:56.99:0,57,520	1/1:22,0:24:50.83:187,51,0	0/0:34,0:33:65.61:0,66,649	0/0:24,0:22:35.85:0,36,329	1/1:20,0:19:3.01:35,3,0	1/1:8,4:11:21.03:214,21,0	1/1:6,9:14:15.04:171,15,0	1/1:24,0:23:3.01:30,3,0	0/0:22,0:21:38.05:0,38,332	0/0:23,0:22:41.62:0,42,365	0/0:28,0:28:75.02:0,75,679	0/0:23,0:22:56.97:0,57,513	1/1:1,15:16:45.13:514,45,0	0/0:16,0:12:33.02:0,33,302	1/1:10,1:11:29.97:305,30,0	1/1:13,1:14:9.01:93,9,0	1/1:6,9:15:29.98:320,30,0	1/1:17,0:27:48.48:199,48,0	0/0:35,0:35:80.37:0,80,712	0/0:25,0:25:56.43:0,56,503	0/0:13,0:12:30.01:0,30,274
chr10	109917219	.	A	AAC	4020.52	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.938;DP=610;FS=6.194;HRun=0;HaplotypeScore=134.3093;InbreedingCoeff=0.9203;MQ=54.60;MQ0=20;MQRankSum=-10.775;QD=36.55;ReadPosRankSum=5.224;VQSLOD=5.5429;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:32:72.09:0,72,1046	0/0:12,0:11:24.02:0,24,300	0/0:22,0:13:32.87:0,33,387	0/0:27,0:7:11.40:0,11,145	1/1:7,16:21:60.15:816,60,0	1/1:3,14:17:51.15:727,51,0	1/1:6,11:16:7.92:463,8,0	0/0:27,0:25:72.08:0,72,965	1/1:7,18:24:65.99:1018,66,0	0/0:35,0:34:96.25:0,96,1290	0/0:24,0:22:51.41:0,51,639	0/0:20,0:19:5.22:0,5,31	0/0:13,0:12:17.29:0,17,73	0/0:14,0:13:14.05:0,14,49	0/0:24,0:23:8.52:0,9,50	0/0:23,0:22:45.08:0,45,609	0/0:23,0:22:45.04:0,45,640	0/0:28,0:28:78.24:0,78,1159	0/0:24,0:23:66.15:0,66,932	0/0:16,0:16:36.69:0,37,127	0/0:15,0:12:33.11:0,33,504	0/0:13,0:13:24.91:0,25,93	0/0:14,0:14:13.10:0,13,59	0/0:16,0:16:27.47:0,27,110	1/1:12,15:27:66.20:997,66,0	0/0:35,0:35:90.22:0,90,1276	0/0:26,0:26:66.04:0,66,920	0/0:13,0:12:33.08:0,33,479
chr10	109918478	.	GGAGGCA	G	3998.20	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.380;DP=592;FS=2.342;HRun=0;HaplotypeScore=130.5626;InbreedingCoeff=0.9710;MQ=58.33;MQ0=0;MQRankSum=-12.394;QD=44.92;ReadPosRankSum=0.125;VQSLOD=3.2103;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.19:0,60,1900	0/0:8,0:8:24.08:0,24,841	0/0:15,0:13:27.09:0,27,758	0/0:15,0:13:5.19:0,5,726	1/1:3,19:22:33.11:727,33,0	1/1:3,13:16:36.12:800,36,0	1/1:2,16:18:42.14:968,42,0	0/0:26,0:26:66.23:0,66,2192	1/1:3,14:17:30.10:686,30,0	0/0:24,0:24:63.22:0,63,2128	0/0:23,0:23:60.21:0,60,1912	0/0:29,0:29:87.30:0,87,3031	0/0:18,0:18:54.18:0,54,1813	0/0:21,0:21:57.20:0,57,1963	0/0:24,0:24:66.23:0,66,2282	0/0:28,0:28:81.28:0,81,2823	0/0:25,0:25:69.21:0,69,2254	0/0:30,0:30:84.29:0,84,2911	0/0:19,0:18:48.16:0,48,1504	0/0:23,0:23:69.24:0,69,2394	0/0:30,0:30:87.28:0,87,2907	0/0:15,0:15:45.15:0,45,1451	0/0:17,0:17:42.14:0,42,1366	0/0:19,0:19:57.20:0,57,1999	1/1:2,14:16:36.12:817,36,0	0/0:25,0:25:63.22:0,63,2104	0/0:36,0:35:99:0,108,3720	0/0:9,0:9:27.09:0,27,932
chr10	109918600	.	T	TGTCA	5041.31	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.253;DP=755;FS=8.448;HRun=0;HaplotypeScore=141.5981;InbreedingCoeff=0.9909;MQ=76.46;MQ0=1;MQRankSum=-3.139;QD=41.32;ReadPosRankSum=1.276;VQSLOD=5.1345;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,126,2271	0/0:8,0:8:24.07:0,24,397	0/0:32,0:31:64.49:0,64,1221	0/0:30,0:27:63.14:0,63,1057	1/1:4,24:28:27.09:708,27,0	1/1:1,11:12:24.08:626,24,0	1/1:5,21:29:39.13:1016,39,0	0/0:34,0:34:87.30:0,87,1536	1/1:5,27:32:11.66:1592,12,0	0/0:33,0:33:96.32:0,96,1686	0/0:20,0:20:60.21:0,60,1082	0/0:32,0:32:87.30:0,87,1555	0/0:22,0:22:63.16:0,63,1054	0/0:31,0:31:84.27:0,84,1480	0/0:36,0:36:99:0,105,1880	0/0:28,0:28:84.29:0,84,1518	0/0:31,0:31:84.26:0,84,1474	0/0:14,0:14:39.11:0,39,654	0/0:25,0:25:69.17:0,69,1178	0/0:24,0:24:69.24:0,69,1255	0/0:28,0:28:69.24:0,69,1236	0/0:28,0:28:84.27:0,84,1485	0/0:24,0:24:69.24:0,69,1255	0/0:27,0:27:75.26:0,75,1353	1/1:1,19:21:42.14:1100,42,0	0/0:34,0:34:90.29:0,90,1574	0/0:32,0:32:93.29:0,93,1609	0/0:13,0:13:36.12:0,36,635
chr10	109920156	.	TGAG	T	4385.75	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.996;DP=744;FS=28.181;HRun=0;HaplotypeScore=107.2350;InbreedingCoeff=0.9919;MQ=80.47;MQ0=0;MQRankSum=-3.201;QD=38.81;ReadPosRankSum=1.494;VQSLOD=3.5735;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,154,3423	0/0:4,0:4:12.04:0,12,272	0/0:19,0:19:48.12:0,48,1027	0/0:25,0:26:57.71:0,58,1202	1/1:1,30:31:78.19:1232,78,0	1/1:0,18:18:42.10:658,42,0	1/1:3,27:30:69.24:1148,69,0	0/0:34,0:34:84.28:0,84,1821	1/1:1,16:17:45.15:748,45,0	0/0:36,0:36:99:0,105,2236	0/0:18,0:18:54.19:0,54,1170	0/0:30,0:30:90.31:0,90,2017	0/0:19,0:19:54.19:0,54,1202	0/0:34,0:34:99:0,99,2203	0/0:33,0:33:96.33:0,96,2176	0/0:25,0:25:75.26:0,75,1678	0/0:38,0:38:99:0,114,2583	0/0:22,0:22:66.23:0,66,1492	0/0:27,0:27:66.22:0,66,1434	0/0:19,0:19:57.20:0,57,1285	0/0:45,0:45:99:0,129,2874	0/0:27,0:27:81.28:0,81,1803	0/0:24,0:24:69.24:0,69,1545	0/0:37,0:37:99:0,111,2516	1/1:2,15:17:36.12:600,36,0	0/0:34,0:34:99:0,99,2216	0/0:21,0:21:57.20:0,57,1290	0/0:7,0:7:21.07:0,21,474
chr10	109921433	.	GCGCTCGAGGAC	G	927.13	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=4.225;DP=220;FS=11.853;HRun=0;HaplotypeScore=76.2094;InbreedingCoeff=0.6209;MQ=81.60;MQ0=0;MQRankSum=-4.317;QD=66.22;ReadPosRankSum=2.287;VQSLOD=2.5849;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:36.12:0,36,1942	./.	0/0:6,0:6:18.06:0,18,770	0/0:9,0:9:26.12:0,26,883	0/0:0,2:2:0.47:0,0,1	1/1:0,3:3:6.02:212,6,0	1/1:0,4:4:9.03:317,9,0	0/0:10,0:10:27.09:0,27,1235	1/1:0,4:4:12.04:423,12,0	0/0:7,0:7:21.07:0,21,1176	0/0:2,0:2:6.02:0,6,344	0/0:2,0:2:6.02:0,6,244	0/0:1,0:1:3.01:0,3,171	0/0:8,0:8:21.07:0,21,1194	0/0:4,0:4:12.04:0,12,687	0/0:5,0:5:15.05:0,15,858	0/0:20,0:19:60.16:0,60,2829	0/0:19,0:19:54.19:0,54,3091	0/0:5,0:4:12.01:0,12,531	0/0:1,0:1:3.01:0,3,171	0/0:49,0:49:99:0,121,6490	0/0:3,0:3:3.01:0,3,89	0/0:3,0:3:6.02:0,6,327	0/0:24,0:23:63.22:0,63,3237	1/1:0,3:3:3.01:106,3,0	0/0:6,0:6:18.06:0,18,1031	0/0:5,0:5:15.05:0,15,741	0/0:1,0:1:3.01:0,3,172
chr10	109922421	.	C	CA	3970.26	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-10.204;DP=581;FS=3.417;HRun=8;HaplotypeScore=61.0504;InbreedingCoeff=0.9967;MQ=85.22;MQ0=1;MQRankSum=-1.720;QD=28.36;ReadPosRankSum=4.464;VQSLOD=3.8734;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:78.01:0,78,714	0/0:11,0:11:33.02:0,33,302	0/0:19,0:19:35.98:0,36,323	0/0:18,0:18:37.92:0,38,384	0/0:24,0:24:54:0,54,494	0/0:13,0:13:33.01:0,33,302	0/0:19,0:19:51:0,51,462	0/0:29,0:29:75:0,75,677	0/0:26,0:26:72.04:0,72,659	0/0:21,0:21:51.02:0,51,467	0/0:12,0:12:26.99:0,27,242	1/1:1,17:18:45.13:519,45,0	1/1:1,18:19:54.16:623,54,0	1/1:3,20:24:60.18:691,60,0	1/1:2,17:19:48.14:554,48,0	0/0:16,0:17:50.06:0,50,445	0/0:39,0:39:92.99:0,93,840	0/0:29,0:28:75.04:0,75,687	0/0:19,0:19:54.03:0,54,494	0/0:25,0:25:66.02:0,66,604	0/0:17,0:17:45.02:0,45,412	1/1:2,19:21:54.04:579,54,0	1/1:6,11:17:33.10:381,33,0	1/1:2,20:22:54.16:623,54,0	0/0:20,0:19:45.01:0,45,411	0/0:25,0:25:63.02:0,63,577	0/0:19,0:19:48.01:0,48,434	0/0:5,0:5:15.01:0,15,137
chr10	109923521	.	G	GTTGT	14827.62	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-6.657;DP=743;FS=0.341;HRun=0;HaplotypeScore=125.4552;InbreedingCoeff=0.9962;MQ=59.12;MQ0=4;MQRankSum=-5.926;QD=37.07;ReadPosRankSum=-0.522;VQSLOD=4.7977;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,26:37:63.22:1553,63,0	0/0:19,0:19:51.17:0,51,849	0/0:30,0:23:18.08:0,18,416	0/0:31,0:22:31.99:0,32,409	1/1:7,0:29:54.12:831,54,0	1/1:5,0:16:18.06:315,18,0	1/1:10,1:24:22.32:371,22,0	1/1:17,15:32:63.21:1341,63,0	1/1:4,0:22:36.12:631,36,0	0/0:39,0:39:78.25:0,78,1249	0/0:18,0:18:45.15:0,45,745	0/0:23,0:23:63.20:0,63,1024	0/0:21,0:21:54.17:0,54,874	0/0:22,0:22:45.15:0,45,749	0/0:33,0:33:69.23:0,69,1135	0/0:31,0:30:75.24:0,75,1204	1/1:12,25:37:69.24:1701,69,0	1/1:9,21:31:54.19:1332,54,0	1/1:15,5:18:24.05:478,24,0	1/1:11,13:24:36.12:799,36,0	1/1:4,18:22:51.17:1201,51,0	0/0:25,0:25:66.23:0,66,1099	0/0:32,0:32:71.25:0,71,1159	0/0:19,0:19:36.12:0,36,599	1/1:13,0:33:36.12:634,36,0	1/1:8,23:31:25.30:1673,25,0	1/1:7,21:32:63.21:1448,63,0	1/1:2,7:9:21.07:518,21,0
chr10	109925702	.	C	CT	4530.03	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.471;DP=774;FS=4.017;HRun=0;HaplotypeScore=84.5322;InbreedingCoeff=0.9999;MQ=84.80;MQ0=0;MQRankSum=-0.083;QD=40.45;ReadPosRankSum=0.942;VQSLOD=5.3989;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,175,2398	0/0:17,0:17:48.14:0,48,638	0/0:22,0:22:56.27:0,56,818	0/0:26,0:27:57.57:0,58,806	1/1:0,20:20:45.15:671,45,0	1/1:1,16:17:39.13:587,39,0	1/1:1,27:28:81.27:1218,81,0	0/0:28,0:28:78.25:0,78,1063	1/1:0,31:31:90.30:1348,90,0	0/0:28,0:28:78.26:0,78,1090	0/0:13,0:13:36.12:0,36,503	0/0:27,0:27:78.22:0,78,1038	0/0:33,0:33:96.29:0,96,1303	0/0:26,0:26:78.24:0,78,1057	0/0:50,0:50:99:0,150,2080	0/0:34,0:34:99:0,99,1367	0/0:26,0:26:75.25:0,75,1048	0/0:34,0:34:99:0,102,1387	0/0:20,0:19:57.17:0,57,760	0/0:15,0:15:45.14:0,45,612	0/0:65,0:65:99:0,186,2529	0/0:19,0:19:48.16:0,48,669	0/0:13,0:13:39.13:0,39,545	0/0:38,0:38:99:0,114,1557	1/1:0,16:16:48.16:705,48,0	0/0:31,0:31:93.31:0,93,1301	0/0:22,0:22:66.21:0,66,902	0/0:14,0:14:42.14:0,42,586
chr10	109926273	.	G	GCACACACACACA	1129.76	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=-2.374;DP=617;FS=0.000;HRun=0;HaplotypeScore=223.5058;InbreedingCoeff=0.8092;MQ=57.23;MQ0=1;MQRankSum=-4.470;QD=9.19;ReadPosRankSum=-0.052;VQSLOD=2.4449;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:46:85.13:0,85,2629	0/0:11,0:11:27.08:0,27,799	1/1:9,0:4:2.04:6,2,0	./.	1/1:12,14:32:3.27:30,3,0	1/1:16,8:25:6.02:353,6,0	1/1:14,5:22:3.01:176,3,0	0/0:32,0:32:42.06:0,42,1102	1/1:5,6:11:6.02:352,6,0	0/0:28,0:28:51.17:0,51,1587	0/0:22,0:22:45.15:0,45,1345	0/0:17,0:17:39.13:0,39,1261	0/0:15,0:16:39.13:0,39,1134	0/0:24,0:24:51.17:0,51,1710	0/0:15,0:15:36.12:0,36,1206	0/0:17,0:17:45.11:0,45,1483	0/0:31,0:34:66.19:0,66,1869	0/0:32,0:33:66.70:0,67,2195	0/0:18,0:17:33.11:0,33,880	0/0:23,0:23:54.14:0,54,1651	0/0:20,0:20:33.11:0,33,1096	0/0:17,0:17:36.12:0,36,1161	0/0:29,0:29:81.26:0,81,2369	0/0:18,0:20:48.15:0,48,1570	1/1:9,14:24:6.49:354,6,0	0/0:26,0:27:60.09:0,60,1680	0/0:17,0:17:30.10:0,30,982	0/0:20,0:20:33.08:0,33,980
chr10	109931825	.	G	GACACACACACACACAC	6905.01	PASS	AB=0.586;AC=41;AF=0.788;AN=52;BaseQRankSum=-1.175;DP=551;FS=7.759;HRun=0;HaplotypeScore=234.1264;InbreedingCoeff=0.6457;MQ=52.32;MQ0=11;MQRankSum=-4.731;QD=16.76;ReadPosRankSum=-1.485;VQSLOD=2.2761;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:8.76:447,9,0	0/0:6,0:8:18.06:0,18,746	./.	./.	1/1:20,0:19:2.62:24,3,0	1/1:15,0:14:5.67:93,6,0	1/1:22,0:21:17.05:372,17,0	1/1:29,0:27:39.58:839,40,0	1/1:16,0:16:3.10:239,3,0	0/0:19,0:21:26.30:0,26,1041	0/0:15,0:17:30.10:0,30,1187	1/1:7,0:21:9.03:295,9,0	1/1:17,0:18:17.31:324,17,0	0/0:15,0:16:4.57:0,5,116	1/1:22,0:24:18.06:524,18,0	0/0:26,0:30:41.39:0,41,1195	1/1:19,0:20:17.97:601,18,0	1/1:23,0:23:32.95:961,33,0	1/1:15,0:15:14.49:386,14,0	1/1:5,5:14:2.92:192,3,0	1/1:17,0:17:6.43:46,6,0	1/1:15,0:16:10.70:211,11,0	1/1:7,0:22:2.26:90,2,0	1/1:27,0:26:11.86:153,12,0	1/1:13,0:13:2.76:46,3,0	1/1:22,0:22:35.01:855,35,0	0/1:5,6:16:0.30:0,0,0	1/1:0,0:4:3.01:209,3,0
chr10	109931927	.	T	TAAAAAC	5782.01	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-5.957;DP=645;FS=23.301;HRun=0;HaplotypeScore=137.5426;InbreedingCoeff=0.9956;MQ=67.63;MQ0=1;MQRankSum=-11.761;QD=59.61;ReadPosRankSum=-0.871;VQSLOD=2.7787;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:51.17:0,51,1060	0/0:17,0:17:45.15:0,45,906	0/0:25,0:25:41.87:0,42,767	0/0:16,0:15:24.08:0,24,473	1/1:8,13:24:51.17:1445,51,0	1/1:6,9:15:33.11:929,33,0	1/1:9,9:18:36.10:1061,36,0	0/0:34,0:34:57.15:0,57,1150	1/1:6,4:10:15.05:449,15,0	0/0:36,0:36:99:0,99,2035	0/0:15,0:15:36.12:0,36,727	0/0:24,0:24:60.19:0,60,1211	0/0:17,0:17:45.14:0,45,891	0/0:22,0:22:54.16:0,54,1018	0/0:25,0:25:72.25:0,72,1518	0/0:27,0:27:69.20:0,69,1348	0/0:26,0:26:51.17:0,51,1020	0/0:26,0:26:57.19:0,57,1126	0/0:26,0:26:63.14:0,63,1167	0/0:30,0:30:51.15:0,51,999	0/0:24,0:24:54.18:0,54,1116	0/0:27,0:27:57.20:0,57,1175	0/0:19,0:19:36.12:0,36,759	0/0:18,0:18:39.13:0,39,822	1/1:10,19:30:60.21:1899,60,0	0/0:29,0:28:57.17:0,57,1162	0/0:18,0:18:48.16:0,48,1012	0/0:23,0:23:60.21:0,60,1265
chr10	109937837	.	T	TA	1974.73	PASS	AB=0.952;AC=11;AF=0.196;AN=56;BaseQRankSum=-5.125;DP=621;FS=7.508;HRun=10;HaplotypeScore=72.3141;InbreedingCoeff=0.8330;MQ=62.95;MQ0=1;MQRankSum=-2.961;QD=17.17;ReadPosRankSum=-0.798;VQSLOD=3.8341;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:77.84:0,78,637	0/0:15,0:15:38.93:0,39,316	0/0:25,0:22:9.11:0,9,225	0/1:19,0:12:8.68:9,0,98	1/1:9,20:30:60.02:622,60,0	1/1:4,20:24:35.48:572,35,0	1/1:4,10:14:1.75:286,2,0	0/0:26,0:27:58.68:0,59,474	1/1:3,12:15:36.08:379,36,0	0/0:20,0:20:21.65:0,22,339	0/0:24,1:25:14.13:0,14,479	0/0:23,0:23:59.86:0,60,481	0/0:24,0:24:59.91:0,60,493	0/0:13,0:13:38.96:0,39,320	0/0:30,0:30:65.89:0,66,539	0/0:31,0:31:77.89:0,78,640	0/0:24,1:25:31.52:0,32,461	0/0:32,0:32:50.59:0,51,567	0/0:19,0:19:46.95:0,47,373	0/0:19,0:19:36.66:0,37,313	0/0:17,0:17:38.93:0,39,320	0/0:19,0:19:41.09:0,41,341	0/0:21,0:21:47.90:0,48,392	0/0:14,0:14:41.84:0,42,332	1/1:2,10:12:27.03:276,27,0	0/0:32,0:32:74.87:0,75,612	0/0:22,0:23:49.95:0,50,400	0/0:14,0:14:38.94:0,39,320
chr10	109939607	.	CCCT	C	106.44	PASS	AB=1.000;AC=8;AF=0.167;AN=48;BaseQRankSum=1.857;DP=252;FS=2.977;HRun=0;HaplotypeScore=34.5514;InbreedingCoeff=0.4874;MQ=70.23;MQ0=19;MQRankSum=-0.760;QD=2.66;ReadPosRankSum=-3.135;VQSLOD=0.3354;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:6.54:0,7,91	0/0:4,0:4:5.66:0,6,59	0/0:43,0:14:31.02:0,31,412	0/0:48,0:15:23.25:0,23,438	1/1:11,0:11:5.97:65,6,0	1/1:7,0:6:8.90:60,9,0	1/1:13,1:11:6.02:93,6,0	0/0:13,0:13:8.50:0,9,201	./.	0/0:7,0:7:8.36:0,8,78	0/0:5,0:5:5.99:0,6,58	0/0:7,0:7:11.97:0,12,136	0/0:7,0:6:5.52:0,6,50	0/0:6,0:6:11.51:0,12,152	./.	0/0:6,0:6:13.86:0,14,178	0/0:5,0:5:2.96:0,3,35	0/0:13,0:10:8.67:0,9,125	0/0:6,0:6:8.97:0,9,83	0/0:4,0:4:4.99:0,5,26	0/0:4,0:3:6.02:0,6,95	./.	0/1:4,0:4:0:0,0,0	0/0:3,0:3:2.97:0,3,20	0/1:4,0:4:0:0,0,0	./.	0/0:6,0:6:8.68:0,9,110	0/0:3,0:3:2.96:0,3,23
chr10	109939622	.	C	CG	1470.99	PASS	AC=40;AF=0.741;AN=54;BaseQRankSum=-0.963;DP=186;FS=8.321;HRun=0;HaplotypeScore=35.5024;InbreedingCoeff=0.6502;MQ=83.15;MQ0=0;MQRankSum=-2.033;QD=12.90;ReadPosRankSum=-5.476;VQSLOD=1.6933;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:8.98:72,9,0	0/0:3,0:3:2.97:0,3,20	0/0:20,0:12:13.94:0,14,147	0/0:19,0:12:13.80:0,14,117	1/1:5,0:5:11.60:75,12,0	./.	1/1:11,0:11:14.48:91,14,0	1/1:10,1:12:28.42:223,28,0	1/1:4,0:4:8.92:64,9,0	0/0:8,0:8:15.03:0,15,167	0/0:9,0:9:20.96:0,21,200	1/1:8,0:7:11.98:99,12,0	1/1:7,0:6:14.85:106,15,0	0/0:0,0:2:0:0,0,0	1/1:2,0:2:3:25,3,0	0/0:1,0:1:3:0,3,29	1/1:5,0:5:5.99:50,6,0	1/1:17,0:15:20.87:157,21,0	1/1:0,0:3:8.98:85,9,0	1/1:2,0:2:3:25,3,0	1/1:4,0:4:8.98:73,9,0	1/1:1,0:1:2.98:21,3,0	1/1:1,0:1:2.97:20,3,0	1/1:3,0:3:8.93:65,9,0	1/1:5,0:5:8.99:75,9,0	1/1:5,0:5:14.97:128,15,0	1/1:11,0:11:20.03:140,20,0	1/1:2,0:2:5.94:43,6,0
chr10	109939758	.	C	CT	841.88	PASS	AB=0.973;AC=20;AF=0.357;AN=56;BaseQRankSum=1.043;DP=474;FS=18.178;HRun=13;HaplotypeScore=71.3629;InbreedingCoeff=0.3571;MQ=60.45;MQ0=11;MQRankSum=0.902;QD=3.84;ReadPosRankSum=-0.974;VQSLOD=-0.4192;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:40.31:0,40,376	0/1:5,0:5:9.10:9,0,32	0/1:19,0:10:9.18:9,0,38	0/1:10,0:7:5.61:6,0,14	0/0:22,0:22:18.91:0,19,101	0/0:12,0:11:20.04:0,20,145	0/0:23,0:22:18.69:0,19,250	0/0:24,0:25:20.87:0,21,174	0/0:14,0:13:18.33:0,18,139	0/0:15,2:16:0.39:0,0,118	0/1:12,1:13:55.56:56,0,103	1/1:12,0:12:19.16:124,19,0	1/1:12,0:10:11.59:89,12,0	1/1:4,10:14:11.68:93,12,0	1/1:3,11:14:11.93:110,12,0	0/0:17,0:17:26.17:0,26,162	0/0:28,0:27:26.85:0,27,240	0/1:33,1:33:9.89:10,0,202	0/0:17,0:18:12.80:0,13,175	0/0:10,0:8:6.58:0,7,67	0/0:11,0:10:11.90:0,12,82	0/1:7,0:6:5.05:49,0,5	1/1:5,7:9:12.01:111,12,0	1/1:24,5:29:21.54:308,22,0	0/0:11,0:11:17.04:0,17,103	0/1:22,1:24:37.83:38,0,136	0/1:11,1:11:15.64:16,0,50	0/0:11,0:10:16.90:0,17,108
chr10	109939794	.	G	GA	1874.73	PASS	AB=0.558;AC=8;AF=0.154;AN=52;BaseQRankSum=-2.298;DP=447;FS=7.161;HRun=1;HaplotypeScore=52.0603;InbreedingCoeff=0.7356;MQ=49.32;MQ0=25;MQRankSum=0.719;QD=21.30;ReadPosRankSum=-0.496;VQSLOD=3.0571;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:66.04:0,66,799	0/0:2,0:2:3.01:0,3,37	./.	./.	1/1:5,20:24:42.06:578,42,0	1/1:1,12:11:29.99:397,30,0	0/1:2,20:20:2.54:457,0,3	0/0:26,0:22:57.10:0,57,696	0/1:5,11:15:8.60:368,0,9	0/0:24,0:23:66.18:0,66,821	0/0:10,0:9:18.05:0,18,219	0/0:11,0:10:30.10:0,30,389	0/0:15,0:10:27.05:0,27,319	0/0:9,0:5:15.05:0,15,194	0/0:17,0:17:48.15:0,48,610	0/0:16,0:16:42.11:0,42,526	0/0:22,0:22:51.15:0,51,644	0/0:29,0:26:69.16:0,69,872	0/0:15,0:13:36.07:0,36,433	0/0:16,0:15:39.13:0,39,504	0/0:22,0:20:51.05:0,51,595	0/0:12,0:11:33.06:0,33,397	0/0:15,0:12:24.06:0,24,295	0/0:23,0:23:56.36:0,56,722	1/1:0,11:11:15.05:225,15,0	0/0:14,0:13:33.11:0,33,426	0/0:18,0:16:45.15:0,45,579	0/0:15,0:14:41.95:0,42,469
chr10	109941278	.	T	TCGC	727.66	PASS	AC=8;AF=0.308;AN=26;BaseQRankSum=-2.405;DP=127;FS=1.322;HRun=0;HaplotypeScore=50.0258;InbreedingCoeff=0.5735;MQ=55.49;MQ0=1;MQRankSum=1.729;QD=18.19;ReadPosRankSum=0.201;VQSLOD=3.2746;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:0.47:1,0,0	./.	./.	./.	./.	./.	1/1:18,10:27:42.12:744,42,0	./.	1/1:1,0:1:3.01:59,3,0	./.	./.	0/0:3,0:3:9.03:0,9,123	./.	0/0:3,0:3:6.02:0,6,82	./.	0/0:4,0:4:3.01:0,3,41	0/0:17,0:18:33.07:0,33,419	0/0:14,0:13:24.08:0,24,328	./.	./.	0/0:16,0:16:14.98:0,15,205	./.	./.	0/0:17,0:18:36.03:0,36,430	1/1:5,0:5:3.47:27,3,0	0/0:2,0:2:3.01:0,3,41	0/0:1,0:1:3.01:0,3,41	./.
chr10	109943343	.	GCACGCGCGCGCGCACGCGCGCGCGCGCACA	G	7364.29	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=7.555;DP=457;FS=35.702;HRun=0;HaplotypeScore=290.4785;InbreedingCoeff=0.7432;MQ=67.67;MQ0=1;MQRankSum=-5.811;QD=43.07;ReadPosRankSum=0.137;VQSLOD=2.6403;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,17:25:16.61:1112,17,0	0/0:10,0:10:21.07:0,21,1655	0/1:8,0:7:56.48:56,0,63	0/1:11,0:10:99:113,0,125	0/0:26,0:26:14.77:0,15,476	0/0:13,0:14:20.50:0,21,1557	0/0:33,0:33:26.86:0,27,945	1/1:11,9:20:14.03:593,14,0	0/0:16,0:16:11.94:0,12,216	0/0:21,0:21:51.16:0,51,3934	0/0:15,0:15:39.13:0,39,3425	0/0:20,0:20:36.09:0,36,1625	0/0:8,0:8:15.05:0,15,609	0/0:19,0:19:39.10:0,39,1813	0/0:17,0:17:28.71:0,29,1076	0/0:13,0:13:33.11:0,33,1884	1/1:13,0:13:18.06:789,18,0	1/1:3,5:8:3.01:197,3,0	1/1:4,7:11:21.06:1196,21,0	1/1:5,3:8:6.02:250,6,0	1/1:20,14:34:3.01:215,3,0	0/0:21,0:21:36.64:0,37,1963	0/0:14,0:14:30.26:0,30,1640	0/0:21,0:21:18.06:0,18,737	0/0:18,0:18:11.53:0,12,765	1/1:3,6:10:15.05:1172,15,0	1/1:9,8:17:12.04:954,12,0	1/1:0,5:5:9.03:715,9,0
chr10	109943345	.	ACGCGCGCGCGCACGCGCGCGCGCG	A	5939.75	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=8.867;DP=443;FS=46.991;HRun=0;HaplotypeScore=241.7646;InbreedingCoeff=0.7223;MQ=66.77;MQ0=1;MQRankSum=-5.731;QD=36.89;ReadPosRankSum=1.218;VQSLOD=2.7312;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,2:25:16.30:862,16,0	0/0:10,0:10:21.07:0,21,1526	0/1:8,0:6:56.92:57,0,63	0/1:10,0:10:99:113,0,122	0/0:26,0:26:15.52:0,16,416	0/0:14,0:14:21.07:0,21,1112	0/0:33,0:33:27.07:0,27,775	1/1:17,0:17:8.05:524,8,0	0/0:15,0:15:11.94:0,12,216	0/0:19,0:19:54.17:0,54,3860	0/0:15,0:15:42.14:0,42,3419	0/0:19,0:19:39.10:0,39,1563	0/0:8,0:8:15.05:0,15,609	0/0:20,0:20:39.10:0,39,1750	0/0:18,0:18:27.84:0,28,1058	0/0:13,0:13:33.11:0,33,1781	1/1:9,4:13:17.93:728,18,0	1/1:8,0:8:3.01:135,3,0	1/1:10,0:10:21.06:1011,21,0	1/1:7,0:7:3.01:193,3,0	1/1:31,0:31:3.01:194,3,0	0/0:21,0:21:36.03:0,36,1828	0/0:14,0:14:29.55:0,30,1574	0/0:20,0:20:18.06:0,18,733	0/0:17,0:17:9.60:0,10,551	1/1:9,0:9:15.05:887,15,0	1/1:17,0:17:12.04:706,12,0	1/1:5,0:5:9.03:529,9,0
chr10	109943349	.	GCGCGCGCA	G	2252.20	PASS	AB=0.983;AC=36;AF=0.643;AN=56;BaseQRankSum=7.598;DP=388;FS=0.000;HRun=0;HaplotypeScore=139.3335;InbreedingCoeff=0.3178;MQ=65.16;MQ0=2;MQRankSum=-6.553;QD=7.74;ReadPosRankSum=-1.302;VQSLOD=2.0523;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:15.05:256,15,0	0/0:10,0:10:21.53:0,22,549	0/0:6,0:4:5.01:0,5,27	0/1:8,0:8:4:4,0,34	1/1:19,7:26:3:29,3,0	1/1:13,3:16:18.04:258,18,0	1/1:12,26:38:11.49:135,11,0	1/1:9,0:9:5.99:77,6,0	0/0:15,2:17:0.47:0,0,1	0/0:18,0:18:44.83:0,45,1226	0/0:15,0:15:42.14:0,42,1218	0/1:17,0:17:49.97:50,0,164	1/1:6,0:6:6.46:50,6,0	0/1:18,0:18:73.57:74,0,122	0/1:15,0:15:29.50:39,0,30	0/0:12,0:12:18.05:0,18,567	1/1:8,0:8:10.58:169,11,0	1/1:5,0:5:2.88:15,3,0	1/1:7,0:7:15:241,15,0	1/1:3,0:3:3.01:55,3,0	1/1:14,0:14:3.01:56,3,0	0/0:19,0:19:1.37:0,1,94	0/1:15,0:15:79.94:80,0,87	0/1:22,0:21:19.60:31,0,20	1/1:19,4:23:10.26:140,10,0	1/1:7,0:7:15.05:280,15,0	1/1:8,0:8:12.04:224,12,0	1/1:5,0:5:9.03:168,9,0
chr10	109943351	.	GCGCGCA	G	2070.61	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=7.497;DP=381;FS=0.000;HRun=0;HaplotypeScore=130.0308;InbreedingCoeff=0.4523;MQ=63.90;MQ0=3;MQRankSum=-5.476;QD=7.04;ReadPosRankSum=-0.650;VQSLOD=2.2678;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:14.98:186,15,0	0/0:10,0:10:20.98:0,21,409	0/0:6,0:4:5.35:0,5,29	0/0:8,0:7:0.55:0,1,16	1/1:25,0:25:2.85:35,3,0	1/1:14,3:17:18.06:293,18,0	1/1:37,0:37:17.82:172,18,0	1/1:9,0:9:5.38:49,5,0	0/0:17,0:17:0.47:0,0,1	0/0:17,0:17:44.82:0,45,1008	0/0:17,0:17:41.13:0,41,973	0/1:17,0:17:56.88:57,0,78	1/1:6,0:6:8.99:75,9,0	0/1:17,0:17:37.74:105,0,38	1/1:13,0:13:8.23:54,8,0	0/0:12,0:12:18.05:0,18,457	1/1:7,0:7:10.58:125,11,0	1/1:5,0:5:1.25:3,1,0	1/1:7,0:7:13.86:171,14,0	1/1:3,0:3:3.01:40,3,0	1/1:14,0:14:3.01:41,3,0	1/1:18,0:18:8.05:68,8,0	0/1:16,0:15:15.32:105,0,15	1/1:21,0:20:3:35,3,0	1/1:21,1:22:9.50:125,9,0	1/1:7,0:7:15.05:210,15,0	1/1:8,0:8:12.04:168,12,0	1/1:5,0:5:9.03:126,9,0
chr10	109943353	.	GCGCA	G	2067.42	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=7.462;DP=369;FS=4.228;HRun=0;HaplotypeScore=120.3205;InbreedingCoeff=0.5542;MQ=62.75;MQ0=3;MQRankSum=-3.501;QD=7.23;ReadPosRankSum=1.053;VQSLOD=2.5546;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:13.83:117,14,0	0/0:9,0:9:20.93:0,21,316	0/0:5,0:3:5.77:0,6,34	0/0:8,0:7:0.81:0,1,17	1/1:9,16:25:2.83:46,3,0	1/1:7,10:17:17.92:260,18,0	1/1:33,2:35:17.98:206,18,0	1/1:9,0:9:2.24:26,2,0	0/0:2,13:15:0:0,0,0	0/0:18,0:18:44.82:0,45,785	0/0:16,0:16:41.03:0,41,679	0/1:15,0:15:24.55:103,0,25	1/1:6,0:6:8.99:75,9,0	0/1:16,0:16:1.96:161,0,2	1/1:13,0:13:12.45:98,12,0	0/0:12,0:12:21.04:0,21,365	1/1:6,0:6:9:79,9,0	0/1:5,0:5:0:0,0,0	1/1:7,0:7:5.77:102,6,0	1/1:3,0:3:3:26,3,0	1/1:14,0:14:3:27,3,0	1/1:17,0:17:24.32:210,24,0	1/1:16,0:15:21.82:160,22,0	1/1:19,0:18:8.90:60,9,0	1/1:7,16:23:9.47:143,9,0	1/1:7,0:7:15.02:140,15,0	1/1:8,0:8:12.01:112,12,0	1/1:5,0:5:9.01:84,9,0
chr10	109943355	.	GCA	G	1710.01	PASS	AB=1.000;AC=39;AF=0.722;AN=54;BaseQRankSum=7.560;DP=357;FS=4.344;HRun=0;HaplotypeScore=112.9549;InbreedingCoeff=0.6309;MQ=60.01;MQ0=3;MQRankSum=-2.095;QD=6.22;ReadPosRankSum=0.950;VQSLOD=3.2499;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:11.36:56,11,0	0/0:9,0:9:17.05:0,17,215	0/0:4,0:2:5.72:0,6,33	0/0:7,0:6:0.54:0,1,17	1/1:23,0:23:2.84:14,3,0	1/1:17,0:17:17.69:123,18,0	1/1:32,2:34:17.88:134,18,0	1/1:9,0:9:1.31:11,1,0	0/0:15,0:15:0:0,0,0	0/0:16,0:16:44.82:0,45,595	0/0:16,0:16:37.91:0,38,475	1/1:14,1:15:11.27:188,11,0	1/1:6,0:6:8.99:75,9,0	1/1:16,1:17:25.77:216,26,0	1/1:11,1:12:12:117,12,0	0/0:10,0:10:21.02:0,21,253	1/1:6,0:6:8.22:36,8,0	./.	0/1:7,0:7:3.96:40,0,4	1/1:3,0:3:2.74:12,3,0	1/1:14,0:14:2.80:13,3,0	1/1:13,2:15:24.07:318,24,0	1/1:16,0:15:24.44:217,24,0	1/1:17,2:18:8.94:84,9,0	1/1:22,0:22:8.78:55,9,0	1/1:7,0:7:14.20:70,14,0	1/1:8,0:8:11.36:56,11,0	1/1:5,0:5:8.52:42,9,0
chr10	109943357	.	ACG	A	641.14	PASS	AB=1.000;AC=36;AF=0.692;AN=52;BaseQRankSum=6.828;DP=361;FS=0.839;HRun=0;HaplotypeScore=115.9257;InbreedingCoeff=0.4352;MQ=59.26;MQ0=4;MQRankSum=-4.369;QD=2.44;ReadPosRankSum=1.994;VQSLOD=2.4216;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:11.83:57,12,0	0/0:8,0:8:11.95:0,12,116	./.	0/0:7,0:6:2.22:0,2,7	0/0:25,0:25:2.90:0,3,22	1/1:16,0:16:14.25:63,14,0	1/1:33,0:33:6.19:26,6,0	1/1:9,0:9:5.74:30,6,0	0/0:18,0:18:0:0,0,0	0/0:16,0:15:7.92:0,8,216	0/1:16,0:16:2.31:2,0,247	0/1:14,0:14:6.42:40,0,6	./.	0/1:18,0:18:2.70:14,0,3	1/1:8,3:11:2.98:22,3,0	0/0:10,0:10:15:0,15,184	1/1:4,0:6:8.68:46,9,0	0/1:5,0:5:0:0,0,0	1/1:7,0:7:11.36:56,11,0	1/1:3,0:3:2.90:16,3,0	1/1:14,0:14:2.88:15,3,0	1/1:15,1:16:23.62:158,24,0	1/1:16,0:15:3.41:24,3,0	1/1:5,12:16:2.96:19,3,0	1/1:22,0:22:7.50:31,8,0	1/1:7,0:7:14.20:70,14,0	1/1:8,0:8:11.36:56,11,0	1/1:5,0:5:8.52:42,9,0
chr10	109943367	.	G	GCACACACACA	424.29	PASS	AB=0.935;AC=22;AF=0.407;AN=54;BaseQRankSum=1.488;DP=368;FS=3.151;HRun=0;HaplotypeScore=149.9652;InbreedingCoeff=0.2756;MQ=52.79;MQ0=3;MQRankSum=-1.812;QD=2.28;ReadPosRankSum=-2.859;VQSLOD=2.0673;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:1.32:0,1,155	0/0:11,0:11:20.49:0,20,425	./.	0/0:4,0:4:2.50:0,2,9	0/0:23,0:23:8.16:0,8,98	0/1:18,0:18:15.66:16,0,189	0/0:35,0:35:22.14:0,22,264	1/1:9,0:9:0.92:32,1,0	1/1:14,0:14:1.76:5,2,0	0/0:19,0:18:48.29:0,48,826	0/0:15,0:15:32.63:0,33,678	1/1:12,0:13:4.52:111,5,0	0/1:11,0:9:0.10:0,0,0	0/1:6,4:17:0.54:144,0,1	1/1:13,0:13:0.47:69,0,0	0/0:12,0:12:18.05:0,18,409	0/1:6,0:6:18.21:18,0,30	1/1:5,0:5:2.68:11,3,0	0/0:7,0:7:5.88:0,6,81	1/1:3,0:3:2.74:12,3,0	1/1:14,0:14:2.37:8,2,0	0/1:21,0:21:10.05:66,0,10	0/0:13,0:12:1.97:0,2,4	1/1:19,0:18:0.18:65,0,0	0/1:23,0:23:8.98:9,0,78	0/0:7,0:7:14.98:0,15,253	0/0:8,0:8:12.04:0,12,279	0/0:5,0:5:9.01:0,9,163
chr10	109943940	.	C	CT	1635.80	PASS	AB=0.875;AC=15;AF=0.268;AN=56;BaseQRankSum=-1.572;DP=624;FS=0.455;HRun=12;HaplotypeScore=86.8644;InbreedingCoeff=0.6622;MQ=65.86;MQ0=5;MQRankSum=0.636;QD=9.80;ReadPosRankSum=0.838;VQSLOD=3.1216;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:36:54.02:0,54,540	0/1:5,1:6:14.33:14,0,64	0/0:31,0:22:16.14:0,16,88	0/0:24,0:15:20.79:0,21,117	0/0:21,0:21:41.38:0,41,287	0/0:13,0:13:28.98:0,29,191	0/0:24,1:25:8.28:0,8,198	0/0:35,1:37:40.07:0,40,382	0/0:21,0:20:32.21:0,32,224	0/0:22,0:23:42.73:0,43,296	0/0:9,0:8:19.45:0,19,135	1/1:5,16:22:35.22:289,35,0	1/1:5,20:26:50.92:482,51,0	1/1:5,8:13:15.02:146,15,0	1/1:5,21:24:11.14:270,11,0	0/0:23,0:23:47.66:0,48,349	0/0:26,4:31:9.33:0,9,385	0/0:24,0:24:28.03:0,28,342	0/0:36,0:36:47.15:0,47,488	0/0:16,2:18:6.10:0,6,198	0/0:10,0:9:17.89:0,18,131	1/1:7,7:13:5.13:212,5,0	0/1:14,3:16:21.22:115,0,21	1/1:8,13:20:13.99:284,14,0	0/0:15,0:15:29.18:0,29,217	0/1:19,2:22:7.90:8,0,316	0/0:30,1:31:42.14:0,42,461	0/0:20,0:19:17.69:0,18,260
chr10	109943957	.	CTTTCTTT	C	1557	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=4.484;DP=549;FS=9.985;HRun=0;HaplotypeScore=114.0415;InbreedingCoeff=0.8761;MQ=52.28;MQ0=26;MQRankSum=-7.091;QD=15.57;ReadPosRankSum=1.014;VQSLOD=2.0269;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:87.22:0,87,2731	0/0:5,0:4:12.04:0,12,328	0/1:14,0:5:0.01:0,0,0	0/0:19,0:7:7.27:0,7,132	1/1:9,13:21:18.04:336,18,0	1/1:7,7:12:30.09:661,30,0	1/1:12,11:19:15.05:361,15,0	0/0:28,0:27:57.19:0,57,1564	1/1:3,12:14:12.04:288,12,0	0/0:18,0:18:39.13:0,39,1327	0/0:10,0:7:12.04:0,12,384	0/0:21,0:19:27.08:0,27,802	0/0:22,0:22:45.15:0,45,1515	0/0:14,0:13:18.06:0,18,555	0/0:21,0:20:30.09:0,30,944	0/0:22,0:22:51.17:0,51,1816	0/0:31,0:30:63.21:0,63,2221	0/0:25,0:23:56.71:0,57,1884	0/0:27,0:26:54.18:0,54,1792	0/0:15,0:15:33.11:0,33,1164	0/0:7,0:6:18.06:0,18,681	0/0:15,0:13:30.10:0,30,881	0/0:22,0:19:45.15:0,45,1269	0/0:18,0:15:33.11:0,33,1098	1/1:7,4:11:3.01:72,3,0	0/0:23,0:21:51.14:0,51,1634	0/0:29,0:29:75.25:0,75,2548	0/0:17,0:15:36.12:0,36,1129
chr10	109944388	.	C	CT	1368.12	PASS	AB=0.952;AC=15;AF=0.288;AN=52;BaseQRankSum=0.317;DP=462;FS=13.526;HRun=9;HaplotypeScore=56.7546;InbreedingCoeff=0.7678;MQ=43.41;MQ0=39;MQRankSum=-0.483;QD=10.94;ReadPosRankSum=-1.092;VQSLOD=0.8273;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:14.78:0,15,130	0/0:7,0:6:11.97:0,12,99	./.	./.	0/0:23,0:23:32.44:0,32,282	0/0:11,0:11:5.98:0,6,52	0/0:14,0:11:8.78:0,9,78	0/0:29,0:22:20.27:0,20,225	0/0:15,0:15:14.95:0,15,125	0/0:13,0:13:14.96:0,15,125	0/0:12,0:8:14.97:0,15,125	1/1:10,9:19:32.65:317,33,0	1/1:6,3:9:11.83:106,12,0	1/1:7,9:14:17.42:157,17,0	1/1:10,10:18:1.49:241,1,0	0/0:21,0:21:38.73:0,39,334	0/0:25,0:22:17.13:0,17,149	0/0:28,0:27:20.09:0,20,180	0/0:21,0:17:32.66:0,33,275	0/0:10,0:10:11.24:0,11,102	0/0:10,0:9:2.08:0,2,24	1/1:3,6:9:14.83:146,15,0	1/1:6,11:17:33.07:355,33,0	1/1:6,9:14:21.49:220,21,0	0/0:13,0:10:11.68:0,12,104	0/1:19,1:17:1.57:2,0,218	0/0:13,0:13:10.59:0,11,101	0/0:6,0:4:0.42:0,0,0
chr10	109944761	.	TCA	T	1218.39	PASS	AB=0.907;AC=36;AF=0.783;AN=46;BaseQRankSum=2.524;DP=497;FS=1.180;HRun=0;HaplotypeScore=62.2008;InbreedingCoeff=0.1744;MQ=58.08;MQ0=7;MQRankSum=-0.516;QD=3.42;ReadPosRankSum=1.986;VQSLOD=1.9015;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,7:23:5.92:64,6,0	0/1:9,0:8:1.99:2,0,52	./.	./.	1/1:7,0:8:2.84:14,3,0	1/1:11,0:15:2.84:14,3,0	1/1:17,0:23:2.84:14,3,0	./.	1/1:13,0:19:5.64:27,6,0	0/0:10,0:10:0:0,0,0	0/0:6,0:6:6:0,6,57	1/1:12,7:20:11.14:109,11,0	1/1:8,4:13:11.86:110,12,0	1/1:15,5:20:3.01:32,3,0	1/1:13,3:17:8.85:78,9,0	0/1:25,5:30:68.66:69,0,150	1/1:14,8:22:14.71:139,15,0	1/1:17,4:21:5.99:54,6,0	0/0:15,0:14:2.97:0,3,20	./.	./.	0/1:7,3:10:25.86:26,0,38	1/1:11,0:11:1.55:4,2,0	1/1:32,16:48:30.08:319,30,0	1/1:11,0:16:11.36:56,11,0	0/1:12,0:12:39.96:40,0,58	1/1:6,4:11:15.34:142,15,0	1/1:6,1:7:3.01:32,3,0
chr10	109947030	.	T	TA	10336.53	PASS	AB=0.686;AC=42;AF=0.750;AN=56;BaseQRankSum=-10.160;DP=612;FS=3.611;HRun=10;HaplotypeScore=58.8521;InbreedingCoeff=0.6384;MQ=71.13;MQ0=2;MQRankSum=-0.814;QD=20.84;ReadPosRankSum=1.243;VQSLOD=5.9253;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,31:37:31.92:750,32,0	0/0:9,0:9:23.97:0,24,197	0/1:23,0:19:7.93:8,0,150	0/0:16,0:14:22.78:0,23,160	1/1:2,19:22:53.97:558,54,0	1/1:3,21:24:60.15:639,60,0	1/1:2,13:15:36.09:384,36,0	1/1:7,23:30:35.43:561,35,0	1/1:1,24:25:63.16:671,63,0	0/0:37,0:36:92.87:0,93,762	0/0:17,0:17:35.92:0,36,294	1/1:2,14:16:33.08:352,33,0	1/1:2,13:16:38.93:397,39,0	1/1:6,10:16:5.57:263,6,0	1/1:1,24:25:51.13:544,51,0	0/0:34,0:35:85.91:0,86,693	1/1:8,30:39:66:686,66,0	0/1:6,15:21:13.20:284,0,13	1/1:7,19:27:62.95:632,63,0	1/1:6,16:22:8.54:437,9,0	1/1:3,13:16:36.09:384,36,0	0/1:2,7:9:6.59:142,0,7	0/1:3,6:9:6.58:142,0,7	1/1:2,18:20:45.11:480,45,0	1/1:3,20:24:53.97:556,54,0	1/1:5,17:22:28.60:489,29,0	1/1:3,22:25:63.12:659,63,0	1/1:1,12:13:30.07:318,30,0
chr10	109948350	.	AC	A	4376.75	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.131;DP=756;FS=10.437;HRun=4;HaplotypeScore=73.9211;InbreedingCoeff=0.9992;MQ=79.05;MQ0=0;MQRankSum=-2.158;QD=31.72;ReadPosRankSum=1.730;VQSLOD=5.0242;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,1633	0/0:9,0:9:27.09:0,27,378	0/0:27,0:27:54.95:0,55,920	0/0:17,0:17:44.05:0,44,489	1/1:1,20:21:51.16:609,51,0	1/1:0,22:22:54.17:648,54,0	1/1:0,39:39:99:1295,108,0	0/0:26,0:26:72.21:0,72,961	1/1:3,32:35:99:1176,99,0	0/0:24,0:24:72.23:0,72,993	0/0:11,0:11:33.10:0,33,443	0/0:31,0:31:90.26:0,90,1221	0/0:28,0:28:78.25:0,78,1072	0/0:36,0:36:99:0,108,1510	0/0:46,0:45:99:0,138,1895	0/0:50,0:50:99:0,141,1975	0/0:27,0:27:72.20:0,72,970	0/0:19,0:19:54.18:0,54,755	0/0:19,0:19:48.16:0,48,668	0/0:11,0:11:27.09:0,27,376	0/0:67,0:67:99:0,196,2659	0/0:16,0:16:42.13:0,42,570	0/0:14,0:14:39.13:0,39,545	0/0:33,0:33:93.27:0,93,1277	1/1:1,20:21:54.17:648,54,0	0/0:37,0:37:99:0,108,1461	0/0:19,0:19:57.19:0,57,798	0/0:10,0:10:27.09:0,27,378
chr10	109948860	.	GAACCAAAAA	G	2627.10	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=1.351;DP=491;FS=0.000;HRun=0;HaplotypeScore=107.9683;InbreedingCoeff=0.4679;MQ=52.73;MQ0=31;MQRankSum=2.680;QD=14.76;ReadPosRankSum=-3.361;VQSLOD=1.4736;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:63.78:65,0,64	0/0:7,0:7:21.05:0,21,488	0/0:29,0:5:3.46:0,3,46	0/0:36,0:6:13.46:0,13,135	0/0:26,0:25:42.64:0,43,804	0/0:19,0:17:15.46:0,15,596	0/0:11,0:11:30.03:0,30,353	1/1:24,0:22:54.08:572,54,0	0/0:16,0:15:39.10:0,39,569	0/0:15,0:14:36.10:0,36,730	0/0:15,0:14:36.09:0,36,751	0/0:14,0:14:29.54:0,30,502	0/0:9,0:8:2.56:0,3,358	0/0:22,0:21:33.01:0,33,546	0/0:19,0:19:45.07:0,45,686	0/0:24,0:23:57.08:0,57,1648	0/1:23,0:23:91.11:517,0,91	1/1:15,0:15:38.87:394,39,0	1/1:9,0:9:22.25:165,22,0	1/1:1,14:15:23.56:251,24,0	0/1:8,0:7:58.40:194,0,58	0/0:9,0:9:18.02:0,18,278	0/0:14,0:14:33.39:0,33,600	0/0:15,0:15:7.70:0,8,321	0/0:13,0:13:27.06:0,27,400	0/1:19,0:17:99:508,0,116	1/1:20,0:18:9.03:115,9,0	0/1:14,0:13:29.12:29,0,107
chr10	109948863	.	CCAAA	C	1269.48	PASS	AB=0.978;AC=23;AF=0.411;AN=56;BaseQRankSum=7.053;DP=497;FS=9.111;HRun=0;HaplotypeScore=76.4336;InbreedingCoeff=-0.2569;MQ=51.50;MQ0=47;MQRankSum=0.406;QD=3.81;ReadPosRankSum=-1.545;VQSLOD=0.3469;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:12.13:26,0,12	0/0:7,0:7:15.72:0,16,195	0/0:34,0:3:3:0,3,27	0/0:35,0:6:8.53:0,9,50	0/1:25,0:24:15.54:16,0,335	0/1:19,0:16:34.36:34,0,212	0/1:8,3:11:40.75:41,0,117	1/1:21,0:20:42.63:255,43,0	0/1:16,0:14:70.86:71,0,132	0/0:17,0:16:44.83:0,45,477	0/0:13,0:13:20.24:0,20,297	0/1:14,1:14:99:107,0,142	0/1:9,1:8:16.47:16,0,145	0/0:22,0:20:10.62:0,11,224	0/1:20,0:20:11.63:12,0,242	0/0:22,0:22:37.49:0,37,786	0/1:22,0:22:5.31:173,0,5	0/1:14,0:14:23.17:95,0,23	0/1:11,0:9:18.10:59,0,18	1/1:15,0:15:3.04:67,3,0	0/1:9,0:8:34.69:73,0,35	0/1:8,0:8:7.52:8,0,68	0/1:16,0:14:0.12:0,0,210	0/1:13,0:13:94.92:126,0,95	0/0:12,0:12:19.86:0,20,146	0/1:22,0:20:96.44:174,0,96	1/1:20,0:18:8.85:56,9,0	0/1:16,0:13:25.73:26,0,40
chr10	109949362	.	AT	A	1528.75	PASS	AB=0.917;AC=11;AF=0.196;AN=56;BaseQRankSum=1.622;DP=547;FS=5.513;HRun=12;HaplotypeScore=91.5800;InbreedingCoeff=0.8485;MQ=64.80;MQ0=2;MQRankSum=0.791;QD=13.41;ReadPosRankSum=1.400;VQSLOD=3.9134;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:88.31:0,88,856	0/0:10,0:10:30.06:0,30,304	0/0:20,0:11:12.41:0,12,99	0/0:13,0:5:3.86:0,4,42	1/1:1,16:18:49.85:377,50,0	1/1:3,21:24:56.76:441,57,0	1/1:1,8:10:25.94:192,26,0	0/0:35,0:35:69.75:0,70,787	1/1:3,13:17:34.87:261,35,0	0/0:26,0:26:72.12:0,72,718	0/0:18,0:18:50.96:0,51,498	0/0:19,2:22:30.70:0,31,478	0/0:15,1:17:18.67:0,19,351	0/0:8,0:8:21.02:0,21,200	0/0:13,2:15:15.81:0,16,326	0/0:29,0:29:63.56:0,64,755	0/0:34,0:34:84.15:0,84,844	0/0:16,1:17:18.80:0,19,356	0/1:20,2:22:11.82:12,0,412	0/0:17,0:18:44.91:0,45,429	0/0:11,0:11:21.04:0,21,214	0/0:8,0:8:18.04:0,18,182	0/0:17,0:17:42.07:0,42,420	0/0:16,0:16:45.05:0,45,437	1/1:2,20:23:55.60:423,56,0	0/0:16,0:16:44.81:0,45,427	0/0:37,0:37:99:0,99,976	0/0:11,0:13:38.70:0,39,346
chr10	109955872	.	GA	G	3831.87	PASS	AB=0.591;AC=41;AF=0.732;AN=56;BaseQRankSum=7.696;DP=527;FS=8.099;HRun=9;HaplotypeScore=74.3737;InbreedingCoeff=0.6510;MQ=79.01;MQ0=5;MQRankSum=-1.491;QD=10.61;ReadPosRankSum=1.188;VQSLOD=2.2763;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:1,10:11:10.48:92,0,10	0/0:11,0:11:33.06:0,33,352	0/0:52,1:30:19.18:0,19,253	0/0:32,0:22:34.74:0,35,370	1/1:6,14:21:22.26:158,22,0	1/1:5,10:18:18.11:127,18,0	1/1:6,8:14:7.24:57,7,0	1/1:5,15:20:44.76:349,45,0	1/1:2,10:12:14.99:135,15,0	0/0:22,0:22:56.89:0,57,584	0/0:16,0:16:42.11:0,42,474	1/1:5,17:22:35.14:315,35,0	1/1:6,18:24:33.01:299,33,0	1/1:2,16:18:23.99:215,24,0	1/1:6,20:26:32.84:280,33,0	0/0:31,0:31:84.21:0,84,940	1/1:4,15:19:12:105,12,0	1/1:2,13:15:24:212,24,0	1/1:7,3:10:20.95:170,21,0	0/1:2,5:7:6.79:89,0,7	1/1:2,13:15:8.11:77,8,0	1/1:5,13:18:14.81:207,15,0	1/1:6,14:20:20.87:189,21,0	1/1:3,22:25:41.67:373,42,0	1/1:2,6:8:3:27,3,0	0/1:6,6:12:15.71:104,0,16	1/1:4,17:21:26.74:227,27,0	1/1:1,4:5:0.75:23,1,0
chr10	109955889	.	GA	G	5692.56	PASS	AB=0.987;AC=44;AF=0.786;AN=56;BaseQRankSum=8.873;DP=510;FS=0.000;HRun=1;HaplotypeScore=85.3015;InbreedingCoeff=0.8230;MQ=73.16;MQ0=4;MQRankSum=-1.932;QD=14.48;ReadPosRankSum=-1.401;VQSLOD=3.7342;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:35.91:293,36,0	0/0:11,0:11:30.08:0,30,396	0/1:37,1:19:6.06:6,0,345	0/0:29,0:20:43.18:0,43,452	1/1:16,0:16:23.64:164,24,0	1/1:15,0:15:28.30:192,28,0	1/1:13,0:13:15.86:175,16,0	1/1:22,0:22:35.99:308,36,0	1/1:17,0:17:30.38:222,30,0	0/0:25,0:25:72.14:0,72,953	0/0:18,0:18:54.14:0,54,701	1/1:27,0:27:37.54:423,38,0	1/1:20,0:20:39.89:351,40,0	1/1:18,0:18:36.82:328,37,0	1/1:20,0:20:36.66:304,37,0	0/0:34,0:34:99:0,99,1309	1/1:18,0:18:25.49:172,25,0	1/1:16,1:17:35.48:303,35,0	1/1:12,2:14:33.97:295,34,0	1/1:9,0:9:20.15:150,20,0	1/1:16,1:17:23.78:183,24,0	1/1:14,3:17:32.05:311,32,0	1/1:9,0:9:22.27:204,22,0	1/1:19,3:22:50.92:492,51,0	1/1:12,0:12:22.56:168,23,0	0/1:10,0:10:3.07:146,0,3	1/1:21,0:21:53.15:429,53,0	1/1:5,0:5:7.82:74,8,0
chr10	109957199	.	GA	G	2978.25	PASS	AB=0.787;AC=20;AF=0.357;AN=56;BaseQRankSum=-0.006;DP=557;FS=3.966;HRun=13;HaplotypeScore=70.0140;InbreedingCoeff=0.7371;MQ=59.62;MQ0=9;MQRankSum=0.724;QD=11.11;ReadPosRankSum=1.538;VQSLOD=3.5569;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:33:38.45:436,38,0	0/0:9,0:9:20.87:0,21,189	0/0:8,0:4:4.01:0,4,28	0/1:13,0:10:12.33:12,0,123	0/0:20,0:21:53.13:0,53,476	0/0:22,0:23:53.92:0,54,511	0/0:17,1:15:0.38:0,0,124	1/1:12,23:37:48.27:490,48,0	0/0:16,0:16:36.04:0,36,338	0/0:18,1:20:22.83:0,23,356	0/0:16,0:16:32.53:0,33,316	0/0:2,0:11:17.16:0,17,91	0/0:11,0:12:15.33:0,15,84	0/0:13,0:18:35.91:0,36,189	0/0:4,0:19:25.95:0,26,149	0/0:32,2:34:13.82:0,14,593	1/1:12,19:31:15.41:273,15,0	1/1:6,18:24:43.79:312,44,0	1/1:6,19:28:62.71:426,63,0	1/1:5,17:24:48.56:338,49,0	1/1:6,9:16:4.30:165,4,0	0/0:8,0:19:27.74:0,28,147	0/0:6,0:10:12.36:0,12,64	0/0:3,0:16:22.84:0,23,120	0/0:13,1:14:16.91:0,17,302	0/1:8,22:31:16.20:371,0,16	1/1:3,20:23:44.53:328,45,0	1/1:2,3:6:5.01:28,5,0
chr10	109957327	.	GA	G	1064	PASS	AB=0.715;AC=9;AF=0.161;AN=56;BaseQRankSum=6.368;DP=632;FS=5.206;HRun=14;HaplotypeScore=69.9237;InbreedingCoeff=0.5113;MQ=68.86;MQ0=1;MQRankSum=2.732;QD=8.00;ReadPosRankSum=3.469;VQSLOD=2.9778;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,2:36:51.38:0,51,708	0/0:12,1:13:15.44:0,15,279	0/1:14,1:15:0.17:0,0,86	0/0:12,0:8:8.67:0,9,52	0/1:8,16:26:20.01:217,0,20	1/1:6,17:25:24.34:273,24,0	1/1:5,19:24:29.03:325,29,0	0/0:30,2:36:29.60:0,30,539	1/1:4,15:21:14.97:231,15,0	0/0:22,3:25:12.89:0,13,402	0/0:10,0:13:3.26:0,3,152	0/0:27,2:29:15.84:0,16,414	0/0:15,1:17:24.33:0,24,352	0/0:21,1:23:44.85:0,45,394	0/0:24,2:27:10.05:0,10,481	0/0:26,3:29:45.47:0,45,557	0/0:36,1:37:69.42:0,69,763	0/0:22,0:23:54.30:0,54,471	0/0:27,0:29:59.69:0,60,518	0/0:15,1:16:6.44:0,6,199	0/0:14,2:16:0.85:0,1,284	0/0:20,0:20:42.02:0,42,380	0/0:12,2:14:6.44:0,6,199	0/0:22,0:23:39.31:0,39,491	0/1:7,14:21:44.84:167,0,45	0/0:26,0:27:63.93:0,64,553	0/0:13,0:13:26.95:0,27,240	0/0:17,0:21:50.46:0,50,398
chr10	109960969	.	C	CT	20914.38	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-19.224;DP=824;FS=5.385;HRun=2;HaplotypeScore=69.7878;InbreedingCoeff=0.9999;MQ=80.72;MQ0=0;MQRankSum=-4.382;QD=39.02;ReadPosRankSum=3.164;VQSLOD=5.5411;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,42:45:99:1795,126,0	0/0:14,0:14:36.10:0,36,433	0/0:25,0:25:64.93:0,65,749	0/0:17,0:18:34.64:0,35,402	0/0:30,0:30:90.25:0,90,1090	0/0:23,0:23:63.20:0,63,780	0/0:33,0:33:96.30:0,96,1189	1/1:5,43:48:99:1753,123,0	0/0:31,0:31:93.28:0,93,1140	0/0:25,0:25:69.19:0,69,832	0/0:17,0:17:51.15:0,51,619	1/1:7,38:45:99:1599,111,0	1/1:2,10:12:33.11:473,33,0	1/1:0,32:32:90.30:1296,90,0	1/1:1,35:36:99:1469,102,0	0/0:48,0:48:99:0,141,1719	1/1:1,34:35:96.32:1383,96,0	1/1:1,18:19:45.15:648,45,0	1/1:0,23:23:69.23:994,69,0	1/1:0,12:12:33.11:474,33,0	1/1:4,29:33:84.28:1210,84,0	1/1:2,36:38:99:1469,102,0	1/1:1,22:23:66.22:950,66,0	1/1:0,38:38:99:1556,108,0	0/0:24,0:24:69.22:0,69,856	1/1:1,37:38:99:1559,111,0	1/1:2,39:41:99:1595,111,0	1/1:0,17:17:48.16:691,48,0
chr10	109961320	.	AG	A	6658.85	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.595;DP=580;FS=11.405;HRun=1;HaplotypeScore=58.2696;InbreedingCoeff=0.9966;MQ=86.72;MQ0=0;MQRankSum=-0.809;QD=39.17;ReadPosRankSum=4.024;VQSLOD=4.7074;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.31:0,96,1510	0/0:7,0:7:18.06:0,18,288	0/0:19,0:19:57.16:0,57,874	0/0:22,0:22:63.17:0,63,946	0/0:10,0:10:30.10:0,30,467	0/0:15,0:15:45.15:0,45,710	0/0:28,0:28:84.23:0,84,1285	0/0:25,0:25:72.24:0,72,1130	0/0:24,0:24:72.25:0,72,1151	0/0:15,0:15:45.15:0,45,718	0/0:9,0:9:27.09:0,27,431	1/1:0,31:31:87.28:1216,87,0	1/1:0,24:24:69.23:963,69,0	1/1:0,20:20:57.19:797,57,0	1/1:0,30:30:87.29:1216,87,0	0/0:24,0:24:69.22:0,69,1078	0/0:30,0:30:90.31:0,90,1435	0/0:31,0:31:87.25:0,87,1327	0/0:20,0:20:60.20:0,60,958	0/0:7,0:7:21.07:0,21,336	0/0:29,0:29:87.30:0,87,1388	1/1:0,13:13:33.11:461,33,0	1/1:0,12:12:33.11:454,33,0	1/1:0,40:40:99:1552,111,0	0/0:23,0:23:66.21:0,66,1031	0/0:22,0:22:66.21:0,66,1002	0/0:11,0:11:30.10:0,30,469	0/0:7,0:7:21.07:0,21,336
chr10	109963803	.	G	GGA	3421.92	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=-9.219;DP=566;FS=0.473;HRun=0;HaplotypeScore=75.9487;InbreedingCoeff=0.7100;MQ=73.04;MQ0=5;MQRankSum=0.091;QD=22.66;ReadPosRankSum=1.012;VQSLOD=3.8879;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,114,1385	0/0:5,0:5:10.27:0,10,116	0/1:34,0:24:49.02:49,0,287	0/0:37,0:28:13.95:0,14,427	1/1:7,14:21:4.64:606,5,0	1/1:4,20:25:19.67:854,20,0	1/1:6,17:23:45.15:742,45,0	0/0:25,0:25:54.10:0,54,632	1/1:6,16:22:45.15:742,45,0	0/0:10,0:10:24.07:0,24,289	0/0:10,0:10:24.08:0,24,300	0/0:12,0:12:15.05:0,15,188	0/0:20,0:20:48.15:0,48,600	0/0:16,0:16:33.09:0,33,400	0/0:32,0:32:69.17:0,69,815	0/0:28,0:28:60.17:0,60,737	0/0:25,0:25:55.37:0,55,678	0/0:18,0:18:48.14:0,48,584	0/0:21,0:21:45.08:0,45,530	0/0:13,0:13:33.11:0,33,413	0/0:24,0:24:48.15:0,48,600	0/0:10,0:10:24.08:0,24,300	0/1:12,0:12:32.31:32,0,101	0/0:31,0:30:66.20:0,66,813	1/1:4,10:14:24.08:396,24,0	0/0:16,0:16:39.11:0,39,477	0/0:10,0:10:27.06:0,27,322	0/0:1,0:1:3.01:0,3,38
chr10	109964510	.	A	AT	8070.37	PASS	AB=0.786;AC=34;AF=0.607;AN=56;BaseQRankSum=1.502;DP=393;FS=0.430;HRun=0;HaplotypeScore=61.1251;InbreedingCoeff=0.8318;MQ=72.94;MQ0=2;MQRankSum=0.560;QD=31.77;ReadPosRankSum=3.002;VQSLOD=4.6796;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:66.22:908,66,0	0/0:7,0:7:21.04:0,21,271	0/0:33,0:13:25.88:0,26,219	0/1:16,0:7:0.01:7,0,0	0/0:14,0:14:39.08:0,39,504	0/0:16,0:16:48.07:0,48,611	0/0:8,0:8:24.06:0,24,290	1/1:0,27:27:78.21:1043,78,0	0/0:9,0:9:27.04:0,27,343	0/0:12,0:12:36.12:0,36,489	0/0:9,0:9:18.65:0,19,261	1/1:1,10:12:27.09:373,27,0	1/1:2,10:12:10.14:342,10,0	1/1:0,11:11:26.98:373,27,0	1/1:0,10:10:24.01:307,24,0	0/0:13,0:13:39.06:0,39,502	1/1:2,21:23:57.06:742,57,0	1/1:1,21:22:60.20:828,60,0	1/1:0,13:13:36.05:417,36,0	1/1:1,10:11:30.10:416,30,0	1/1:0,7:7:21.07:293,21,0	0/1:1,3:4:8:87,0,8	1/1:0,7:7:12.04:167,12,0	1/1:0,3:3:6.02:83,6,0	0/0:18,0:18:48.09:0,48,605	1/1:1,13:14:0.29:466,0,0	1/1:3,22:25:43.29:826,43,0	1/1:1,11:12:11.27:393,11,0
chr10	109964991	.	TTTTG	T	10816.01	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=1.342;DP=694;FS=3.907;HRun=0;HaplotypeScore=185.6547;InbreedingCoeff=0.8988;MQ=67.25;MQ0=1;MQRankSum=3.770;QD=30.04;ReadPosRankSum=4.531;VQSLOD=4.6095;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:18:3.71:4,0,64	0/0:5,0:5:9.03:0,9,216	0/0:23,0:22:24.07:0,24,449	0/0:23,0:23:21:0,21,423	1/1:28,0:28:54.18:839,54,0	1/1:29,7:36:53.67:830,54,0	1/1:17,0:17:33.07:504,33,0	0/0:32,0:29:10.09:0,10,42	1/1:24,0:24:56.68:877,57,0	0/0:25,0:25:60.20:0,60,1418	0/0:28,0:28:63.22:0,63,1476	1/1:47,0:47:93.32:1477,93,0	1/1:28,0:28:60.20:943,60,0	1/1:25,0:25:50.77:820,51,0	1/1:50,0:50:99:1783,111,0	0/0:38,0:38:81.26:0,81,1808	0/0:32,0:32:19.32:0,19,130	0/0:32,0:32:32.94:0,33,133	0/0:17,0:14:11.17:0,11,41	0/0:12,0:12:18.44:0,18,81	0/0:16,0:16:5.87:0,6,25	1/1:20,0:20:42.14:673,42,0	1/1:23,0:23:45.10:672,45,0	1/1:31,0:31:66.21:1030,66,0	1/1:12,0:12:24.08:365,24,0	0/0:26,0:26:17.43:0,17,144	0/0:16,0:16:17.97:0,18,79	0/0:9,0:7:7.49:0,7,27
chr10	109964994	.	TG	T	9103.57	PASS	AB=0.653;AC=39;AF=0.696;AN=56;BaseQRankSum=18.257;DP=695;FS=4.084;HRun=1;HaplotypeScore=152.7636;InbreedingCoeff=0.6026;MQ=63.30;MQ0=2;MQRankSum=-3.373;QD=16.40;ReadPosRankSum=4.028;VQSLOD=5.4021;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,10:20:52.15:449,52,0	0/0:5,0:5:15.05:0,15,219	0/0:22,0:21:63.18:0,63,876	0/0:21,0:21:60.08:0,60,803	0/1:12,15:28:10.03:374,0,10	0/1:19,17:36:23.64:388,0,24	0/1:9,8:17:18.51:186,0,19	1/1:14,16:27:62.93:467,63,0	1/1:8,18:26:34:485,34,0	0/0:26,0:26:78.25:0,78,1119	0/0:28,0:28:81.24:0,81,1156	0/1:18,28:46:17.93:697,0,18	1/1:12,17:29:30.06:447,30,0	1/1:12,15:27:43.51:446,44,0	1/1:15,35:50:66.11:977,66,0	0/0:38,0:38:99:0,114,1620	1/1:15,16:32:74.78:659,75,0	1/1:0,31:31:41.98:381,42,0	1/1:1,18:15:42.20:327,42,0	1/1:4,9:13:35.93:313,36,0	1/1:7,7:14:32.90:272,33,0	1/1:7,13:20:8.58:312,9,0	0/1:11,13:24:0.45:291,0,0	1/1:16,16:32:20.74:507,21,0	1/1:5,6:11:23.66:247,24,0	1/1:13,14:27:30:580,30,0	1/1:0,16:16:20.96:184,21,0	1/1:0,6:4:12:115,12,0
chr10	109964996	.	TTTG	T	7640.98	PASS	AB=0.695;AC=36;AF=0.643;AN=56;BaseQRankSum=17.916;DP=701;FS=7.149;HRun=0;HaplotypeScore=183.7982;InbreedingCoeff=0.2784;MQ=62.96;MQ0=4;MQRankSum=-2.294;QD=13.77;ReadPosRankSum=7.169;VQSLOD=3.3492;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:21.70:263,22,0	0/0:5,0:5:15.05:0,15,279	0/0:25,0:22:66.17:0,66,1082	0/0:21,0:21:36.31:0,36,876	0/1:13,15:28:56.40:476,0,56	0/1:22,16:38:84.99:500,0,85	0/1:8,8:16:72.97:235,0,73	1/1:31,0:28:28.22:150,28,0	1/1:10,17:27:9.82:584,10,0	0/0:29,0:29:87.29:0,87,1733	0/0:28,0:28:84.26:0,84,1689	0/1:19,28:47:95.26:899,0,95	1/1:12,17:29:2.52:551,3,0	1/1:11,15:26:23.58:517,24,0	1/1:17,35:52:13.09:1146,13,0	0/0:38,0:38:99:0,114,2241	1/1:32,0:32:11.65:134,12,0	1/1:30,0:30:11.73:44,12,0	1/1:19,0:15:16.59:108,17,0	1/1:13,0:13:10.49:87,10,0	1/1:13,0:13:12.15:58,12,0	0/1:7,13:20:20.96:399,0,21	0/1:11,13:24:19.62:381,0,20	0/1:15,16:31:20.47:609,0,20	1/1:3,6:9:12.81:238,13,0	0/1:27,0:27:21.36:237,0,21	1/1:16,0:16:1.09:15,1,0	1/1:6,0:4:3.05:10,3,0
chr10	109964998	.	TG	T	8425.71	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=18.861;DP=701;FS=4.560;HRun=1;HaplotypeScore=155.9486;InbreedingCoeff=0.2265;MQ=62.21;MQ0=5;MQRankSum=-3.424;QD=15.24;ReadPosRankSum=5.780;VQSLOD=5.1091;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,9:23:58.18:501,58,0	0/0:5,0:5:15.05:0,15,224	0/0:25,0:22:66.16:0,66,922	0/0:21,0:20:56.76:0,57,787	0/1:28,0:28:99:308,0,117	0/1:38,0:38:99:366,0,183	0/1:17,0:17:99:163,0,100	1/1:16,14:27:65.05:496,65,0	0/1:26,0:26:21.40:411,0,21	0/0:29,0:29:87.15:0,87,1266	0/0:28,0:28:84.25:0,84,1222	0/1:48,0:48:99:663,0,219	0/1:28,0:28:44.54:368,0,45	1/1:27,0:27:15.21:387,15,0	0/1:50,0:50:62.69:820,0,63	0/0:40,0:40:99:0,120,1713	1/1:17,15:32:64.72:665,65,0	1/1:16,14:30:41.99:383,42,0	1/1:9,8:13:31.21:251,31,0	1/1:5,8:13:35.92:309,36,0	1/1:7,7:14:35.87:292,36,0	0/1:21,0:21:48.56:311,0,49	0/1:23,0:23:50.16:268,0,50	0/1:30,0:30:86.23:410,0,86	1/1:9,0:9:4.47:163,4,0	1/1:14,14:28:31.96:591,32,0	1/1:7,7:14:20.96:184,21,0	1/1:1,5:4:12:116,12,0
chr10	109965002	.	TG	T	3882.89	PASS	AB=0.833;AC=20;AF=0.357;AN=56;BaseQRankSum=12.972;DP=698;FS=4.576;HRun=1;HaplotypeScore=173.1092;InbreedingCoeff=0.8689;MQ=58.36;MQ0=6;MQRankSum=-6.364;QD=17.57;ReadPosRankSum=0.131;VQSLOD=3.6998;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,3:24:62.87:550,63,0	0/0:5,0:5:15.05:0,15,215	0/0:21,0:18:54.01:0,54,770	0/0:21,1:19:56.97:0,57,774	0/0:28,0:28:22.53:0,23,317	0/0:36,0:36:33.94:0,34,454	0/0:17,0:17:18.35:0,18,243	1/1:30,0:27:67.05:526,67,0	0/0:26,0:26:12.84:0,13,191	0/0:30,0:30:90.27:0,90,1314	0/0:26,0:26:75.18:0,75,1110	0/0:51,0:51:46.68:0,47,681	0/0:30,0:30:14.13:0,14,250	0/0:27,0:27:7.27:0,7,109	0/0:47,0:47:9.61:0,10,318	0/0:38,0:38:99:0,114,1697	1/1:32,0:32:53.82:678,54,0	1/1:32,0:32:44.97:405,45,0	1/1:15,2:13:30.67:247,31,0	1/1:14,0:14:38.94:339,39,0	1/1:13,0:13:29.90:246,30,0	0/0:22,0:22:14.82:0,15,202	0/0:22,0:22:19.64:0,20,208	0/0:29,0:29:17.90:0,18,259	0/1:8,0:8:2.85:3,0,15	0/1:15,15:30:0.64:589,0,1	1/1:13,1:14:20.97:185,21,0	1/1:6,0:4:12:116,12,0
chr10	109965309	.	AAAG	A	1955.12	PASS	AB=0.948;AC=23;AF=0.411;AN=56;BaseQRankSum=10.208;DP=536;FS=23.499;HRun=0;HaplotypeScore=89.9035;InbreedingCoeff=-0.4133;MQ=57.24;MQ0=24;MQRankSum=-0.686;QD=4.50;ReadPosRankSum=1.394;VQSLOD=0.0025;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:31:99:223,0,113	0/0:2,0:2:6.02:0,6,85	0/1:25,0:6:12.53:13,0,30	0/1:25,0:7:33.15:33,0,37	0/1:25,0:24:13.41:13,0,267	0/0:16,0:14:35.42:0,35,307	0/0:23,0:21:20.46:0,20,318	0/1:21,1:18:15.71:127,0,16	0/0:12,0:10:23.55:0,24,172	0/0:19,0:19:55.96:0,56,644	0/1:14,0:11:3:3,0,180	0/1:19,1:19:49.88:50,0,68	0/1:18,1:19:53.99:56,0,54	0/1:12,1:13:40.86:118,0,41	0/1:28,1:27:28.75:170,0,29	0/0:15,0:14:35.31:0,35,502	0/1:30,3:33:42.53:252,0,43	0/1:21,3:24:29.70:206,0,30	0/1:18,0:15:54.30:54,0,79	0/1:17,1:18:61.44:104,0,61	0/1:13,0:13:1.78:63,0,2	0/1:5,5:10:17.53:66,0,18	0/1:19,1:20:75.36:75,0,101	1/1:20,1:21:0.64:126,1,0	0/0:15,0:15:23.93:0,24,202	0/1:22,1:22:91.42:192,0,91	1/1:13,1:14:5.25:123,5,0	0/1:12,1:11:45.73:46,0,59
chr10	109965312	.	GAAA	G	5056.87	PASS	AB=0.615;AC=33;AF=0.589;AN=56;BaseQRankSum=-0.836;DP=534;FS=8.385;HRun=15;HaplotypeScore=82.8096;InbreedingCoeff=0.7813;MQ=60.27;MQ0=25;MQRankSum=-1.313;QD=14.74;ReadPosRankSum=3.668;VQSLOD=3.1952;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,15:32:60.91:585,61,0	0/0:2,0:2:6.02:0,6,110	0/0:25,0:7:8.89:0,9,44	0/0:27,0:8:0.09:0,0,111	0/0:11,0:19:31.41:0,31,278	0/0:12,0:15:26.95:0,27,248	0/0:17,0:20:49.56:0,50,382	1/1:5,15:19:30.35:344,30,0	0/0:3,0:10:23.73:0,24,168	0/0:20,0:20:57.14:0,57,853	0/0:15,0:13:29.96:0,30,382	1/1:6,12:18:13.26:133,13,0	1/1:4,13:18:17.42:185,17,0	1/1:8,4:13:1.23:188,1,0	1/1:10,15:25:16.91:407,17,0	0/0:15,0:14:39.06:0,39,613	1/1:10,23:34:68.71:735,69,0	1/1:9,15:24:13.95:404,14,0	1/1:9,10:17:4.76:232,5,0	1/1:4,13:17:29.83:308,30,0	1/1:1,11:12:21.03:235,21,0	1/1:8,3:11:5.96:144,6,0	1/1:7,12:19:20.37:215,20,0	1/1:3,14:19:23.34:252,23,0	0/0:3,0:15:17.94:0,18,139	0/1:9,14:23:32.67:316,0,33	1/1:2,11:14:26.99:283,27,0	1/1:7,6:11:8.91:91,9,0
chr10	109971906	.	CAA	C	593.61	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=1.445;DP=534;FS=5.937;HRun=17;HaplotypeScore=126.0145;InbreedingCoeff=0.8880;MQ=46.65;MQ0=13;MQRankSum=0.717;QD=5.88;ReadPosRankSum=1.615;VQSLOD=0.1771;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:22:52.60:0,53,512	0/0:8,0:9:20.34:0,20,188	0/0:18,0:4:8.91:0,9,74	0/0:19,0:7:14.09:0,14,110	1/1:14,6:22:4.30:72,4,0	1/1:9,5:15:20:162,20,0	1/1:15,10:29:37.25:250,37,0	0/0:25,0:31:53.65:0,54,505	1/1:10,7:18:14.53:157,15,0	0/0:12,1:14:5.34:0,5,235	0/0:11,0:12:20.95:0,21,215	0/0:24,0:24:50.68:0,51,520	0/0:18,0:19:44.65:0,45,396	0/0:12,0:20:27.40:0,27,258	0/0:21,0:26:69.08:0,69,755	0/0:22,1:26:16.96:0,17,372	0/0:18,0:20:38.32:0,38,396	0/0:16,0:19:41.21:0,41,440	0/0:19,0:18:30.52:0,31,392	0/0:15,0:16:17.94:0,18,164	0/0:10,0:8:15.20:0,15,125	0/0:11,0:15:30:0,30,296	0/0:11,0:11:13.98:0,14,161	0/0:6,0:7:9.44:0,9,85	1/1:8,4:15:17.09:117,17,0	0/0:20,0:22:42.50:0,43,463	0/0:26,0:27:46.72:0,47,503	0/0:14,0:16:30.02:0,30,330
chr10	109973248	.	GA	G	2252.07	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.752;DP=503;FS=0.000;HRun=10;HaplotypeScore=50.9087;InbreedingCoeff=0.9381;MQ=81.16;MQ0=0;MQRankSum=-1.485;QD=19.93;ReadPosRankSum=3.875;VQSLOD=4.2376;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:66.01:0,66,711	0/0:6,0:6:18.05:0,18,199	0/0:15,0:15:24.06:0,24,260	0/0:15,0:15:8.21:0,8,301	0/0:23,0:24:56.98:0,57,604	0/0:19,1:20:31.08:0,31,556	0/0:12,0:12:24.06:0,24,266	0/0:38,0:38:99:0,99,1066	0/0:12,0:12:36.10:0,36,398	0/0:21,0:22:63:0,63,677	0/0:15,0:15:30.04:0,30,314	1/1:2,14:16:38.98:339,39,0	1/1:2,13:15:38.98:339,39,0	1/1:3,15:18:35.98:313,36,0	1/1:2,25:27:68.98:599,69,0	0/0:32,0:32:90.24:0,90,996	0/0:23,0:24:72.01:0,72,769	0/0:6,0:6:15.04:0,15,166	0/0:20,1:22:24.89:0,25,464	0/0:9,0:9:24.06:0,24,258	0/0:14,1:15:16.06:0,16,405	1/1:0,11:11:32.99:287,33,0	1/1:0,7:7:21:182,21,0	1/1:2,17:19:44.99:391,45,0	0/0:17,0:17:45.12:0,45,498	0/0:26,0:26:69.18:0,69,756	0/0:26,2:28:29.23:0,29,778	0/0:8,1:9:1.02:0,1,239
chr10	109973517	.	G	GATAT	2434.16	PASS	AB=0.778;AC=9;AF=0.161;AN=56;BaseQRankSum=-6.323;DP=388;FS=3.615;HRun=0;HaplotypeScore=64.3139;InbreedingCoeff=0.7950;MQ=62.19;MQ0=0;MQRankSum=-0.898;QD=42.70;ReadPosRankSum=1.314;VQSLOD=3.8698;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:54.18:0,54,900	0/0:5,0:5:15.05:0,15,244	0/0:6,0:5:4.17:0,4,79	0/0:6,0:6:9.03:0,9,149	1/1:4,10:16:32.90:759,33,0	1/1:2,14:18:41.72:923,42,0	0/1:5,2:7:41.87:140,0,42	0/0:32,0:35:57.15:0,57,867	1/1:1,4:6:14.84:312,15,0	0/0:9,0:9:24.08:0,24,407	0/0:9,0:9:27.09:0,27,458	0/0:16,0:16:42.14:0,42,705	0/0:22,0:22:57.16:0,57,913	0/0:13,0:13:36.12:0,36,607	0/0:18,0:18:45.15:0,45,740	0/0:10,0:11:33.06:0,33,454	0/0:26,0:27:57.17:0,57,917	0/0:21,0:21:51.10:0,51,795	0/0:14,0:14:24.06:0,24,353	0/0:5,0:5:15.05:0,15,254	0/0:9,0:9:24.08:0,24,407	0/0:4,0:5:12.03:0,12,181	0/0:6,0:5:12.03:0,12,171	0/0:17,0:17:42.14:0,42,709	1/1:3,6:10:20.86:462,21,0	0/0:19,0:19:33.11:0,33,558	0/0:13,0:13:33.57:0,34,535	0/0:20,0:20:60.21:0,60,1017
chr10	109973626	.	TA	T	8851.08	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=6.476;DP=374;FS=2.133;HRun=6;HaplotypeScore=37.6304;InbreedingCoeff=0.8622;MQ=68.15;MQ0=0;MQRankSum=-1.009;QD=27.23;ReadPosRankSum=0.807;VQSLOD=4.6760;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:66.17:709,66,0	0/0:13,0:13:39.13:0,39,513	0/1:9,0:9:1.53:2,0,227	0/0:3,0:3:6.02:0,6,74	1/1:0,16:16:45.11:483,45,0	1/1:1,11:12:30.08:322,30,0	1/1:0,2:2:6.02:64,6,0	1/1:7,42:49:99:1287,123,0	1/1:1,10:11:24.06:258,24,0	0/0:9,0:9:27.08:0,27,344	0/0:10,0:10:30.10:0,30,395	1/1:1,8:9:24.05:252,24,0	1/1:0,9:9:27.07:290,27,0	1/1:0,12:12:33.08:355,33,0	1/1:0,16:16:48.12:516,48,0	0/0:14,0:14:39.11:0,39,498	1/1:1,21:22:57.14:613,57,0	1/1:0,19:19:48.12:516,48,0	1/1:1,8:9:24.06:258,24,0	1/1:0,10:10:27.07:290,27,0	1/1:0,8:8:21.05:226,21,0	1/1:0,5:5:15.04:161,15,0	1/1:0,12:12:32.64:354,33,0	1/1:0,7:7:21.05:226,21,0	1/1:0,11:11:24.06:258,24,0	1/1:1,14:15:5.64:412,6,0	1/1:1,24:25:66.17:709,66,0	1/1:0,10:10:27.07:290,27,0
chr10	109973832	.	A	AGATG	18303.14	PASS	AB=0.707;AC=43;AF=0.768;AN=56;BaseQRankSum=-3.192;DP=719;FS=4.200;HRun=0;HaplotypeScore=118.1834;InbreedingCoeff=0.8805;MQ=66.62;MQ0=7;MQRankSum=1.036;QD=31.61;ReadPosRankSum=1.028;VQSLOD=4.5612;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,5:37:42.05:676,42,0	0/0:13,0:13:24.08:0,24,377	0/0:31,0:19:12.01:0,12,112	0/0:32,0:26:18.02:0,18,172	1/1:10,15:24:42.14:971,42,0	1/1:23,5:28:24.02:383,24,0	1/1:19,4:23:30.09:627,30,0	1/1:53,0:53:53.70:647,54,0	1/1:20,6:25:33.55:644,34,0	0/0:20,0:20:33.07:0,33,488	0/0:14,0:14:14.98:0,15,185	1/1:21,15:36:78.19:1658,78,0	0/1:17,12:29:37.57:972,0,38	1/1:18,13:31:69.60:1399,70,0	1/1:34,18:52:96.35:1921,96,0	0/0:30,0:29:57.15:0,57,813	1/1:13,13:25:51.12:1068,51,0	1/1:6,7:13:27.09:620,27,0	1/1:13,3:15:12.02:213,12,0	1/1:8,7:15:30.07:594,30,0	1/1:20,7:27:33.56:672,34,0	1/1:9,4:13:21.04:379,21,0	1/1:5,5:10:27.09:597,27,0	1/1:14,9:23:44.88:884,45,0	1/1:6,7:13:27.08:596,27,0	1/1:27,8:35:48.16:1049,48,0	1/1:29,9:37:66.13:1295,66,0	1/1:7,3:10:27.02:439,27,0
chr10	109973891	.	G	GGATA	16675.64	PASS	AB=0.625;AC=41;AF=0.732;AN=56;BaseQRankSum=-10.992;DP=743;FS=5.012;HRun=0;HaplotypeScore=157.1392;InbreedingCoeff=0.5827;MQ=61.10;MQ0=5;MQRankSum=0.845;QD=27.75;ReadPosRankSum=2.574;VQSLOD=4.2758;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,17:24:36.12:863,36,0	1/1:6,12:19:33.11:791,33,0	1/1:31,1:17:2.66:25,3,0	0/0:50,0:38:32.25:0,32,462	0/0:16,0:32:26.91:0,27,244	0/0:8,0:19:29.99:0,30,267	0/0:8,0:10:6.01:0,6,56	1/1:52,0:52:3.17:527,3,0	0/0:4,0:16:38.13:0,38,319	0/1:10,20:31:26.60:1320,0,27	1/1:4,10:14:27.07:525,27,0	1/1:17,21:39:30.23:1147,30,0	1/1:15,23:40:3.33:1102,3,0	1/1:12,13:25:21.07:503,21,0	1/1:20,16:39:6.31:1165,6,0	1/1:10,20:30:45.15:1079,45,0	1/1:11,17:27:36.12:846,36,0	1/1:13,0:13:9:120,9,0	1/1:4,9:13:30.09:670,30,0	1/1:9,9:19:21.02:444,21,0	1/1:6,29:36:9.54:1178,10,0	1/1:2,7:10:6.02:144,6,0	0/1:9,7:16:39.61:134,0,40	1/1:10,14:25:18.06:432,18,0	0/0:8,0:15:14.83:0,15,117	1/1:12,23:36:27.29:1505,27,0	1/1:15,26:40:66.23:1566,66,0	0/1:4,10:14:14.81:590,0,15
chr10	109973946	.	TA	T	2540.85	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.066;DP=697;FS=3.744;HRun=7;HaplotypeScore=103.8114;InbreedingCoeff=0.9987;MQ=70.80;MQ0=0;MQRankSum=-4.155;QD=24.67;ReadPosRankSum=2.375;VQSLOD=3.6967;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:81.25:0,81,1004	0/0:15,0:15:30.10:0,30,377	0/0:23,0:23:57.17:0,57,703	0/0:15,0:15:42.12:0,42,495	1/1:5,21:26:59.73:605,60,0	1/1:2,27:29:72.16:734,72,0	1/1:0,12:12:36.08:367,36,0	0/0:48,1:49:99:0,111,1683	1/1:0,22:22:66.15:673,66,0	0/0:35,0:35:96.31:0,96,1206	0/0:19,0:19:48.11:0,48,584	0/0:27,0:27:60.19:0,60,752	0/0:35,0:35:78.25:0,78,981	0/0:19,0:19:39.11:0,39,477	0/0:32,0:32:81.26:0,81,1019	0/0:24,0:24:60.18:0,60,742	0/0:28,0:27:66.21:0,66,830	0/0:11,0:11:21.07:0,21,264	0/0:18,0:18:45.12:0,45,551	0/0:16,0:16:36.11:0,36,441	0/0:40,0:40:87.22:0,87,1062	0/0:12,0:12:33.11:0,33,415	0/0:16,0:15:36.17:0,36,426	0/0:24,0:24:45.14:0,45,566	1/1:2,12:14:33.07:337,33,0	0/0:35,0:35:93.30:0,93,1170	0/0:44,0:44:99:0,111,1368	0/0:22,0:22:54.17:0,54,679
chr10	109974244	.	CT	C	1086.54	PASS	AB=0.878;AC=16;AF=0.286;AN=56;BaseQRankSum=2.067;DP=566;FS=0.970;HRun=14;HaplotypeScore=83.6446;InbreedingCoeff=0.5250;MQ=58.32;MQ0=14;MQRankSum=2.940;QD=6.04;ReadPosRankSum=2.769;VQSLOD=2.8838;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:92.63:0,93,782	0/0:8,1:9:3.36:0,3,163	0/1:10,0:3:0.01:0,0,0	0/1:12,1:7:1.27:1,0,6	0/0:26,0:25:31.70:0,32,200	0/0:20,0:20:43.10:0,43,197	0/0:18,0:18:25.04:0,25,111	0/0:40,0:35:65.91:0,66,576	0/0:17,0:17:29.93:0,30,151	0/0:26,0:27:53.40:0,53,438	0/0:29,0:30:66.17:0,66,596	0/1:8,12:20:13.09:153,0,13	1/1:3,14:16:29.74:205,30,0	1/1:5,13:17:21.72:227,22,0	1/1:4,19:23:39.64:353,40,0	0/1:11,3:14:11.15:11,0,187	0/0:27,1:27:29.55:0,30,447	0/0:15,1:17:24.30:0,24,356	0/0:15,0:13:23.60:0,24,193	0/0:20,0:20:38.80:0,39,330	0/1:7,0:6:3.56:4,0,22	0/0:2,0:2:2.92:0,3,17	1/1:4,8:12:3.89:106,4,0	1/1:8,11:19:11.71:184,12,0	0/0:29,0:29:48.25:0,48,210	0/0:21,0:23:29.76:0,30,246	0/1:23,3:26:10.66:11,0,326	0/0:18,0:17:25.43:0,25,338
chr10	109974246	.	T	TC	1850.65	PASS	AB=0.719;AC=9;AF=0.161;AN=56;BaseQRankSum=6.646;DP=582;FS=1.583;HRun=0;HaplotypeScore=85.9150;InbreedingCoeff=0.6021;MQ=56.96;MQ0=15;MQRankSum=4.415;QD=14.81;ReadPosRankSum=3.939;VQSLOD=5.4643;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:42:99:0,109,1261	0/0:10,0:10:22.30:0,22,276	0/0:10,0:3:2.67:0,3,29	0/1:12,0:6:0.13:0,0,7	1/1:10,15:24:29.96:492,30,0	0/1:8,14:22:15.40:406,0,15	1/1:3,15:18:8.81:261,9,0	0/0:41,0:36:99:0,99,1139	0/1:3,15:18:8.56:342,0,9	0/0:29,0:28:74.63:0,75,836	0/0:34,0:32:83.06:0,83,934	0/0:23,0:22:38.38:0,38,315	0/0:18,0:17:35.96:0,36,301	0/0:19,0:18:44.93:0,45,373	0/0:24,0:24:65.41:0,65,536	0/0:15,0:15:36.04:0,36,419	0/0:30,0:28:66.61:0,67,832	0/0:17,0:17:38.57:0,39,552	0/0:14,0:12:29.99:0,30,335	0/0:22,0:21:57.29:0,57,629	0/0:7,0:6:15.01:0,15,152	0/0:2,0:2:5.98:0,6,48	0/0:12,0:12:25.26:0,25,167	0/0:21,0:21:50.90:0,51,421	1/1:5,25:30:13.80:495,14,0	0/0:23,0:23:65.44:0,65,657	0/0:24,0:24:66.02:0,66,750	0/0:18,0:17:48.06:0,48,588
chr10	109974330	.	T	TG	2036.96	PASS	AB=0.615;AC=13;AF=0.250;AN=52;BaseQRankSum=6.242;DP=456;FS=3.850;HRun=0;HaplotypeScore=74.2259;InbreedingCoeff=0.1936;MQ=40.90;MQ0=46;MQRankSum=-7.156;QD=16.17;ReadPosRankSum=1.311;VQSLOD=5.6549;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:4,10:12:99:212,0,101	0/0:8,0:8:12.04:0,12,168	./.	./.	0/0:34,0:29:45.13:0,45,602	0/0:13,0:12:18.06:0,18,250	0/0:20,0:13:21.07:0,21,292	1/1:9,8:9:24.06:358,24,0	0/0:20,0:16:29.83:0,30,388	0/0:22,0:19:57.19:0,57,796	0/0:28,0:25:60.20:0,60,826	0/0:28,0:27:32.73:0,33,461	0/0:20,0:16:33.11:0,33,461	0/0:16,0:14:30.10:0,30,419	0/0:15,0:14:18.03:0,18,231	0/0:22,0:20:48.16:0,48,669	0/1:6,18:22:91.82:348,0,92	0/1:2,6:8:53.79:84,0,54	0/1:9,5:6:29.89:131,0,30	0/1:7,9:12:56.48:307,0,56	1/1:0,3:2:3.01:48,3,0	0/0:11,0:9:12.04:0,12,167	0/0:17,0:15:24.05:0,24,335	0/0:24,0:22:24.55:0,25,335	0/0:31,0:28:48.14:0,48,651	0/1:5,5:6:23.86:221,0,24	0/1:2,13:14:8.53:436,0,9	1/1:3,1:1:3.01:47,3,0
chr10	109977284	.	GCA	G	114.20	PASS	AB=0.931;AC=10;AF=0.185;AN=54;BaseQRankSum=1.150;DP=679;FS=0.758;HRun=0;HaplotypeScore=115.6555;InbreedingCoeff=-0.1040;MQ=59.29;MQ0=3;MQRankSum=0.815;QD=0.55;ReadPosRankSum=-1.574;VQSLOD=2.1864;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:37.35:0,37,992	0/1:8,2:10:52.99:53,0,164	0/0:50,0:23:45.09:0,45,581	0/0:32,0:26:24.82:0,25,340	1/1:22,0:22:0.46:1,0,0	0/0:35,0:34:5.99:0,6,49	0/0:30,0:30:3.01:0,3,45	0/1:38,2:40:4.07:4,0,898	./.	0/1:25,3:28:46.90:47,0,709	0/1:18,2:20:16.13:16,0,743	0/1:22,1:23:37.86:38,0,450	0/1:26,2:28:68.77:69,0,446	0/0:25,1:26:8.93:0,9,548	0/1:22,1:23:4.27:4,0,449	0/0:19,1:20:17.54:0,18,766	0/0:22,0:22:51.17:0,51,790	0/0:18,1:19:39.06:0,39,563	0/0:19,0:19:39.12:0,39,578	0/0:21,0:21:51.17:0,51,816	0/0:18,1:20:8.51:0,9,591	0/0:12,0:12:30.05:0,30,298	0/0:20,0:20:48.08:0,48,477	0/0:20,0:20:48.08:0,48,471	0/0:33,0:33:12.86:0,13,100	0/0:19,1:20:11.48:0,11,615	0/0:25,1:26:32.58:0,33,982	0/1:12,0:12:2.74:3,0,405
chr10	109979306	.	CAGAGAG	C	1194.43	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=7.165;DP=612;FS=8.492;HRun=0;HaplotypeScore=135.7848;InbreedingCoeff=0.7220;MQ=64.53;MQ0=9;MQRankSum=-6.227;QD=7.28;ReadPosRankSum=1.442;VQSLOD=2.0520;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:27:45.06:0,45,798	0/1:8,0:8:3.93:4,0,341	./.	0/0:44,0:16:0:0,0,0	0/0:26,0:25:6.02:0,6,188	0/0:21,0:21:5.98:0,6,100	0/0:8,0:8:0.47:0,0,1	0/0:27,0:27:9.47:0,9,107	0/0:19,0:19:9.03:0,9,196	0/0:25,0:25:21.02:0,21,405	0/0:19,0:19:9:0,9,125	1/1:17,9:27:15.05:282,15,0	1/1:11,3:21:19.31:311,19,0	1/1:14,7:23:15.05:272,15,0	1/1:18,5:25:9.03:163,9,0	0/0:30,0:32:37.91:0,38,696	0/0:17,0:17:34:0,34,850	0/0:22,0:22:35.12:0,35,671	0/0:14,0:14:12.04:0,12,295	0/0:17,0:17:17.80:0,18,348	0/0:13,0:13:18.03:0,18,332	1/1:11,0:11:2.99:24,3,0	1/1:20,3:27:14.88:207,15,0	1/1:18,1:22:6.02:102,6,0	0/0:14,0:14:0:0,0,1	0/0:30,0:30:42.09:0,42,760	0/0:21,0:20:27.67:0,28,591	0/0:20,0:20:29.66:0,30,599
chr10	109979355	.	C	CGA	33.02	PASS	AB=0.750;AC=9;AF=0.161;AN=56;BaseQRankSum=3.324;DP=740;FS=1.281;HRun=0;HaplotypeScore=136.4814;InbreedingCoeff=0.7550;MQ=74.46;MQ0=29;MQRankSum=1.132;QD=0.27;ReadPosRankSum=-1.636;VQSLOD=2.4356;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.20:0,66,882	0/0:9,0:9:15.03:0,15,203	0/0:73,0:28:57.47:0,57,632	0/0:77,0:32:34.87:0,35,503	1/1:35,0:34:4.70:41,5,0	1/1:42,0:42:3.16:26,3,0	1/1:12,0:12:0.94:2,1,0	0/0:32,0:32:81.25:0,81,1128	0/1:10,5:14:0.97:49,0,1	0/0:18,0:18:48.15:0,48,672	0/0:12,0:12:30.09:0,30,396	0/0:27,0:27:60.03:0,60,668	0/0:29,0:29:66.35:0,66,719	0/0:16,0:16:32.93:0,33,357	0/0:20,0:20:45.13:0,45,525	0/0:29,0:29:51.81:0,52,718	0/0:21,0:21:53.77:0,54,669	0/0:20,0:19:42.53:0,43,527	0/0:30,0:29:59.89:0,60,764	0/0:27,0:26:51.17:0,51,697	0/0:13,0:13:30.06:0,30,390	0/0:18,0:18:51.14:0,51,599	0/0:28,0:28:66.17:0,66,757	0/0:24,0:24:48.14:0,48,562	1/1:19,0:19:7.14:38,7,0	0/0:29,0:29:66.14:0,66,896	0/0:22,0:22:54.15:0,54,721	0/0:17,0:17:42.11:0,42,571
chr10	109980873	.	C	CT	852.28	PASS	AB=0.858;AC=16;AF=0.286;AN=56;BaseQRankSum=-3.964;DP=507;FS=12.048;HRun=15;HaplotypeScore=57.7951;InbreedingCoeff=0.3594;MQ=64.97;MQ0=4;MQRankSum=1.389;QD=4.35;ReadPosRankSum=0.525;VQSLOD=0.1951;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:33.68:0,34,203	0/0:9,0:11:18.71:0,19,99	0/0:15,0:8:5.79:0,6,36	0/1:13,0:6:0:0,0,0	0/1:14,13:27:5.26:160,0,5	0/1:9,7:18:19.03:92,0,19	1/1:8,10:21:10.81:206,11,0	0/0:32,1:36:16.49:0,16,200	1/1:5,14:20:11.16:120,11,0	0/0:22,1:22:12.18:0,12,187	0/0:16,0:19:20.45:0,20,107	0/0:14,0:14:8.40:0,8,53	0/0:16,0:16:35.07:0,35,215	0/1:13,3:16:1.40:1,0,88	0/1:11,1:12:11.92:12,0,44	0/0:12,0:12:11.57:0,12,72	0/0:27,0:28:39.75:0,40,237	1/1:5,7:12:26.79:212,27,0	0/0:21,1:22:3.56:0,4,134	0/0:17,0:19:7.19:0,7,132	0/1:16,0:16:1.07:1,0,87	0/0:12,0:13:13.69:0,14,78	0/0:9,0:11:10.34:0,10,59	0/1:11,1:11:10.55:11,0,57	1/1:5,8:13:22.17:173,22,0	0/1:9,2:14:28.62:29,0,61	0/0:29,0:29:34.89:0,35,215	0/0:10,0:11:13.69:0,14,78
chr10	109984438	.	AGGACACTGCTGCTCT	A	8788.76	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.188;DP=864;FS=11.244;HRun=0;HaplotypeScore=346.5661;InbreedingCoeff=0.9755;MQ=79.99;MQ0=0;MQRankSum=-12.724;QD=95.53;ReadPosRankSum=2.624;VQSLOD=3.6492;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,174,11429	0/0:5,0:5:12.04:0,12,843	0/0:22,0:22:63.22:0,63,3700	0/0:24,0:24:63.18:0,63,3442	1/1:2,7:9:15.05:624,15,0	1/1:1,28:29:69.24:3099,69,0	1/1:5,17:22:42.14:1691,42,0	0/0:40,0:40:99:0,111,7064	1/1:2,25:27:66.23:2965,66,0	0/0:38,0:38:99:0,111,7813	0/0:18,0:18:51.18:0,51,3457	0/0:40,0:40:99:0,117,8160	0/0:38,0:38:99:0,114,8076	0/0:40,0:40:99:0,111,7774	0/0:50,0:50:99:0,148,9883	0/0:41,0:41:99:0,120,8421	0/0:32,0:31:93.31:0,93,6350	0/0:18,0:18:54.19:0,54,4034	0/0:32,0:32:96.30:0,96,5503	0/0:26,0:26:72.24:0,72,4861	0/0:80,0:80:99:0,241,16947	0/0:18,0:17:48.16:0,48,3264	0/0:17,0:17:48.13:0,48,2737	0/0:43,0:43:99:0,123,8467	1/1:1,4:5:9.03:409,9,0	0/0:35,0:35:99:0,105,7331	0/0:39,0:39:99:0,117,8311	0/0:18,0:18:54.19:0,54,4078
chr10	109984744	.	A	AGGG	291.06	PASS	AB=0.917;AC=8;AF=0.143;AN=56;BaseQRankSum=7.301;DP=716;FS=19.719;HRun=0;HaplotypeScore=120.1568;InbreedingCoeff=0.6877;MQ=65.41;MQ0=24;MQRankSum=-5.849;QD=7.28;ReadPosRankSum=-1.574;VQSLOD=1.2784;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1632	0/0:9,0:9:24.08:0,24,378	0/0:102,0:24:59.49:0,59,844	0/0:116,0:27:38.93:0,39,587	1/1:12,5:17:19.88:294,20,0	0/1:4,0:5:9.13:34,0,9	1/1:6,0:6:5.25:28,5,0	0/0:44,0:44:99:0,120,1898	1/1:6,0:6:12.89:69,13,0	0/0:25,0:25:75.25:0,75,1276	0/0:14,0:14:42.13:0,42,660	0/0:13,0:13:33.11:0,33,564	0/0:24,0:24:72.24:0,72,1202	0/0:19,0:19:54.18:0,54,905	0/0:17,0:16:48.16:0,48,809	0/0:27,0:27:81.27:0,81,1305	0/0:35,0:35:99:0,102,1750	0/0:26,0:26:72.24:0,72,1225	0/0:14,0:14:42.14:0,42,694	0/0:24,0:24:69.23:0,69,1158	0/0:10,0:10:28.65:0,29,453	0/0:16,0:15:43.02:0,43,713	0/0:15,0:15:45.14:0,45,736	0/0:11,0:11:24.44:0,24,434	0/1:6,0:6:9.04:9,0,48	0/0:27,0:27:78.26:0,78,1316	0/0:27,0:26:72.20:0,72,1194	0/0:25,0:25:72.24:0,72,1235
chr10	109984799	.	G	GA	1419.69	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-1.836;DP=565;FS=15.681;HRun=10;HaplotypeScore=76.0632;InbreedingCoeff=0.8640;MQ=72.42;MQ0=2;MQRankSum=-2.230;QD=16.70;ReadPosRankSum=-0.932;VQSLOD=2.5381;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,1:30:39.24:0,39,502	0/0:13,0:13:29.96:0,30,246	0/0:29,0:22:2.07:0,2,154	0/0:19,0:14:25.60:0,26,207	1/1:7,13:20:25.95:448,26,0	1/1:1,11:12:27.07:288,27,0	1/1:2,11:13:8.45:295,8,0	0/0:28,0:29:39.95:0,40,472	1/1:6,7:13:18.89:217,19,0	0/0:31,0:31:74.88:0,75,616	0/0:11,0:11:22.18:0,22,176	0/0:17,0:17:40.71:0,41,318	0/0:21,0:21:53.84:0,54,432	0/0:16,0:18:49.02:0,49,381	0/0:21,0:21:59.40:0,59,473	0/0:32,0:32:61.05:0,61,679	0/0:26,0:27:64.93:0,65,523	0/0:25,0:26:64.90:0,65,517	0/0:24,0:27:64.70:0,65,502	0/0:16,0:17:46.26:0,46,358	0/1:9,0:10:2.67:3,0,174	0/0:17,0:17:38.93:0,39,320	0/0:14,0:14:29.93:0,30,243	0/0:7,0:7:20.97:0,21,172	1/1:1,16:17:33.04:339,33,0	0/0:23,0:26:62.60:0,63,471	0/0:26,0:27:66.77:0,67,545	0/0:19,0:19:47.93:0,48,394
chr10	109986385	.	C	CGTAG	9306.82	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-15.379;DP=839;FS=4.421;HRun=0;HaplotypeScore=131.9563;InbreedingCoeff=0.9998;MQ=88.73;MQ0=0;MQRankSum=-3.449;QD=64.63;ReadPosRankSum=2.960;VQSLOD=7.0488;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,160,3037	0/0:14,0:14:42.12:0,42,767	0/0:34,0:34:87.30:0,87,1612	0/0:32,0:32:84.27:0,84,1501	1/1:3,26:33:63.22:1676,63,0	1/1:2,26:28:72.25:1969,72,0	1/1:2,27:29:69.24:1889,69,0	0/0:38,0:38:96.25:0,96,1720	1/1:2,33:37:96.33:2624,96,0	0/0:22,0:22:63.22:0,63,1202	0/0:13,0:13:36.11:0,36,664	0/0:32,0:32:93.32:0,93,1776	0/0:34,0:34:96.29:0,96,1796	0/0:26,0:26:75.26:0,75,1428	0/0:44,0:43:99:0,129,2498	0/0:44,0:44:99:0,123,2351	0/0:23,0:22:66.23:0,66,1267	0/0:17,0:17:45.15:0,45,856	0/0:26,0:26:72.25:0,72,1394	0/0:30,0:30:78.27:0,78,1501	0/0:39,0:39:99:0,117,2248	0/0:33,0:33:90.31:0,90,1707	0/0:21,0:21:63.22:0,63,1190	0/0:29,0:29:81.28:0,81,1546	1/1:1,15:17:42.14:1149,42,0	0/0:40,0:40:99:0,117,2253	0/0:40,0:40:99:0,120,2281	0/0:10,0:10:30.10:0,30,581
chr10	109986491	.	C	CCAA	10757.98	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-11.973;DP=711;FS=3.824;HRun=0;HaplotypeScore=95.8012;InbreedingCoeff=0.9997;MQ=84.65;MQ0=0;MQRankSum=-2.787;QD=53.52;ReadPosRankSum=3.342;VQSLOD=7.3847;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.25:0,78,1272	0/0:10,0:10:30.09:0,30,472	0/0:29,0:29:77.88:0,78,1240	0/0:19,0:19:48.16:0,48,794	0/0:18,0:18:51.17:0,51,841	0/0:23,0:23:66.21:0,66,1075	0/0:30,0:30:84.24:0,84,1369	0/0:35,0:35:84.28:0,84,1373	0/0:25,0:25:72.23:0,72,1167	0/0:22,0:22:66.23:0,66,1099	0/0:18,0:18:51.16:0,51,820	1/1:5,35:42:99:2165,99,0	1/1:5,33:38:99:2247,102,0	1/1:3,25:28:75.04:1586,75,0	1/1:3,30:34:90.31:1995,90,0	0/0:41,0:41:99:0,120,1949	0/0:25,0:25:72.25:0,72,1189	0/0:19,0:19:48.13:0,48,765	0/0:20,0:20:60.18:0,60,929	0/0:16,0:16:45.15:0,45,749	0/0:19,0:19:57.19:0,57,923	1/1:2,12:14:39.09:819,39,0	1/1:4,11:15:27.05:534,27,0	1/1:2,27:29:66.14:1414,66,0	0/0:18,0:18:51.16:0,51,825	0/0:34,0:34:93.30:0,93,1499	0/0:44,0:44:99:0,114,1815	0/0:18,0:18:54.17:0,54,874
chr10	109986969	.	TA	T	2077.07	PASS	AB=0.800;AC=15;AF=0.268;AN=56;BaseQRankSum=4.902;DP=653;FS=0.776;HRun=13;HaplotypeScore=76.8003;InbreedingCoeff=0.8478;MQ=74.30;MQ0=3;MQRankSum=0.609;QD=14.23;ReadPosRankSum=3.244;VQSLOD=4.3954;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,3:31:11.61:0,12,577	0/0:10,0:10:26.95:0,27,246	0/0:29,0:24:15.04:0,15,167	0/0:22,0:13:12.83:0,13,103	0/0:12,0:40:90.79:0,91,477	0/0:5,0:23:22.62:0,23,187	0/0:1,0:12:28.52:0,29,147	0/0:24,0:25:54.02:0,54,502	0/0:5,0:15:23.04:0,23,138	0/0:28,1:29:44.98:0,45,575	0/0:18,1:19:29.16:0,29,440	1/1:1,10:12:25.84:181,26,0	1/1:2,23:25:65.60:481,66,0	1/1:1,16:18:40.81:290,41,0	1/1:2,34:36:80.53:591,81,0	0/0:41,0:41:99:0,111,1039	0/0:36,3:40:67.14:0,67,944	0/0:26,1:28:59.04:0,59,710	0/0:17,0:17:18.31:0,18,311	0/0:29,1:30:53.19:0,53,669	0/0:10,0:10:26.97:0,27,245	1/1:1,15:16:38.76:284,39,0	1/1:5,10:15:0.55:168,1,0	1/1:1,11:12:32.81:241,33,0	0/0:3,0:24:54.45:0,54,309	0/0:25,2:28:24.93:0,25,521	0/0:28,0:30:49.08:0,49,592	0/1:9,3:12:32.69:33,0,191
chr10	109987379	.	GAGGCC	G	4809.79	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.254;DP=640;FS=0.000;HRun=0;HaplotypeScore=118.3865;InbreedingCoeff=0.9827;MQ=84.57;MQ0=0;MQRankSum=-11.143;QD=47.62;ReadPosRankSum=-0.407;VQSLOD=4.5129;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,3106	0/0:8,0:8:24.08:0,24,703	0/0:29,0:29:71.24:0,71,2011	0/0:13,0:13:36.11:0,36,1014	1/1:2,12:14:17.87:213,18,0	1/1:0,18:19:42.14:905,42,0	1/1:0,27:27:63.22:1402,63,0	0/0:28,0:28:81.22:0,81,2153	1/1:2,26:28:81.28:1804,81,0	0/0:24,0:24:66.21:0,66,1968	0/0:3,0:3:9.02:0,9,198	0/0:32,0:32:93.29:0,93,2819	0/0:28,0:28:84.29:0,84,2680	0/0:38,0:38:99:0,114,3591	0/0:28,0:28:81.28:0,81,2550	0/0:37,0:37:99:0,111,3438	0/0:17,0:17:51.13:0,51,1571	0/0:28,0:28:81.28:0,81,2573	0/0:20,0:20:54.19:0,54,1691	0/0:10,0:10:27.08:0,27,776	0/0:41,0:41:99:0,111,3403	0/0:9,0:9:27.08:0,27,772	0/0:10,0:10:27.09:0,27,871	0/0:44,0:44:99:0,132,3993	1/1:0,13:13:24.01:485,24,0	0/0:21,0:21:63.19:0,63,1733	0/0:29,0:29:87.30:0,87,2806	0/0:9,0:9:27.09:0,27,872
chr10	109989270	.	GTT	G	1170.69	PASS	AB=0.775;AC=23;AF=0.411;AN=56;BaseQRankSum=6.878;DP=383;FS=5.011;HRun=16;HaplotypeScore=54.8993;InbreedingCoeff=0.7486;MQ=70.56;MQ0=9;MQRankSum=2.141;QD=8.67;ReadPosRankSum=3.703;VQSLOD=0.8354;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:40.82:0,41,468	0/0:5,0:5:11.99:0,12,127	0/0:22,0:14:13.99:0,14,122	0/1:14,1:10:0.08:0,0,0	0/1:6,8:13:5.06:151,0,5	1/1:2,11:13:20.80:175,21,0	1/1:5,5:10:10.63:98,11,0	0/0:33,0:32:71.27:0,71,806	1/1:2,4:6:11.69:87,12,0	0/0:7,0:9:17.36:0,17,170	0/0:8,0:7:6.02:0,6,79	0/1:8,4:12:16:41,0,16	1/1:2,7:9:16.23:148,16,0	1/1:4,7:11:20.68:162,21,0	1/1:7,10:17:22.90:199,23,0	0/0:13,0:14:34.18:0,34,366	0/0:26,0:29:63.27:0,63,663	0/0:21,0:23:39.42:0,39,430	0/0:14,0:16:34.26:0,34,340	0/0:11,0:11:29.97:0,30,336	0/0:8,0:8:11.99:0,12,136	1/1:4,2:6:5.94:50,6,0	1/1:2,1:3:2.96:25,3,0	1/1:2,2:4:5.97:50,6,0	1/1:5,7:13:23.63:187,24,0	0/0:13,0:14:29.14:0,29,312	0/0:9,0:13:23.37:0,23,237	0/0:12,0:14:33.65:0,34,353
chr10	109990754	.	C	CTTTTTT	7362.77	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=3.218;DP=613;FS=6.547;HRun=12;HaplotypeScore=138.9480;InbreedingCoeff=0.6017;MQ=64.22;MQ0=4;MQRankSum=-4.373;QD=14.08;ReadPosRankSum=-7.367;VQSLOD=-0.5842;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:22.17:235,22,0	0/0:11,0:12:0.85:0,1,434	0/1:42,0:25:39.47:39,0,227	0/1:34,0:18:7.40:7,0,119	1/1:6,3:31:44.90:707,45,0	1/1:9,1:19:9.03:251,9,0	1/1:14,0:23:12.04:252,12,0	1/1:29,0:25:40.34:472,40,0	1/1:15,0:28:6.02:160,6,0	0/0:25,0:24:32.27:0,32,532	0/0:19,0:20:32.41:0,32,522	1/1:16,0:16:35.78:491,36,0	1/1:20,0:19:17.07:193,17,0	1/1:20,0:20:27.05:429,27,0	1/1:19,0:18:38.98:540,39,0	0/0:31,0:33:64.55:0,65,1016	1/1:18,0:17:15.49:176,15,0	1/1:12,0:9:11.95:107,12,0	1/1:16,0:15:8.95:70,9,0	1/1:28,0:28:44.88:641,45,0	1/1:16,0:15:20.96:295,21,0	1/1:15,0:15:23.97:321,24,0	1/1:13,0:13:27.04:368,27,0	1/1:14,0:14:18.03:194,18,0	1/1:3,10:16:9.03:269,9,0	1/1:30,0:28:4.55:471,5,0	1/1:33,0:33:52.91:593,53,0	1/1:8,0:8:6.02:82,6,0
chr10	109991686	.	A	AC	5512.14	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-15.885;DP=771;FS=5.574;HRun=2;HaplotypeScore=69.1890;InbreedingCoeff=0.9999;MQ=71.21;MQ0=1;MQRankSum=0.019;QD=39.94;ReadPosRankSum=1.628;VQSLOD=5.3262;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1322	0/0:10,0:10:30.09:0,30,372	0/0:25,0:21:60.13:0,60,711	0/0:36,0:25:56.98:0,57,644	1/1:2,38:40:99:1554,108,0	1/1:0,23:23:69.23:993,69,0	1/1:1,21:22:54.18:778,54,0	0/0:38,0:38:96.30:0,96,1184	1/1:0,25:25:72.23:1021,72,0	0/0:32,0:32:90.28:0,90,1116	0/0:20,0:20:60.17:0,60,720	0/0:29,0:29:84.26:0,84,1041	0/0:24,0:24:66.19:0,66,806	0/0:28,0:28:84.25:0,84,1029	0/0:37,0:36:99:0,105,1301	0/0:34,0:34:96.30:0,96,1189	0/0:23,0:23:69.22:0,69,854	0/0:21,0:21:57.15:0,57,691	0/0:24,0:24:66.19:0,66,796	0/0:30,0:30:90.28:0,90,1115	0/0:32,0:32:90.28:0,90,1116	0/0:23,0:23:63.19:0,63,771	0/0:27,0:27:81.22:0,81,969	0/0:21,0:21:60.19:0,60,744	1/1:0,28:28:81.27:1166,81,0	0/0:36,0:36:99:0,102,1265	0/0:31,0:30:87.26:0,87,1066	0/0:15,0:15:45.14:0,45,558
chr10	109992089	.	A	AG	11892.30	PASS	AB=0.935;AC=54;AF=0.964;AN=56;BaseQRankSum=2.016;DP=721;FS=7.822;HRun=1;HaplotypeScore=120.3542;InbreedingCoeff=-0.0413;MQ=70.31;MQ0=1;MQRankSum=-3.221;QD=16.49;ReadPosRankSum=7.023;VQSLOD=4.7340;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:88.85:620,89,0	1/1:11,0:11:9.63:150,10,0	0/1:25,0:25:12.64:202,0,13	0/1:23,4:26:20.74:240,0,21	1/1:30,0:30:82.87:559,83,0	1/1:36,0:36:94.78:632,95,0	1/1:20,0:20:50.18:326,50,0	1/1:43,0:43:93.66:688,94,0	1/1:26,0:26:67.93:441,68,0	1/1:30,0:30:84.60:508,85,0	1/1:25,1:26:51.04:503,51,0	1/1:34,0:34:38.79:493,39,0	1/1:30,0:30:79.89:541,80,0	1/1:21,0:21:6.61:276,7,0	1/1:43,0:43:99:771,124,0	1/1:34,0:34:94.15:583,94,0	1/1:28,0:28:68.50:462,69,0	1/1:25,0:25:51.15:438,51,0	1/1:18,0:18:49.43:308,49,0	1/1:19,0:19:30.28:282,30,0	1/1:20,0:20:56.30:394,56,0	1/1:25,0:25:70.99:473,71,0	1/1:14,0:14:35.49:231,35,0	1/1:25,0:25:70.89:455,71,0	1/1:29,0:29:62.92:425,63,0	1/1:20,0:20:32.97:314,33,0	1/1:22,0:22:62:395,62,0	1/1:10,0:10:26.71:183,27,0
chr10	109994533	.	A	AC	1084.18	PASS	AB=0.952;AC=8;AF=0.143;AN=56;BaseQRankSum=14.893;DP=753;FS=14.050;HRun=0;HaplotypeScore=122.9119;InbreedingCoeff=0.4664;MQ=46.15;MQ0=42;MQRankSum=-8.787;QD=5.68;ReadPosRankSum=5.629;VQSLOD=2.5378;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:32:91.53:0,92,705	0/0:11,0:11:23.83:0,24,170	0/0:34,0:8:13.42:0,13,99	0/1:41,0:11:9.57:10,0,48	0/1:34,3:36:24.19:226,0,24	0/1:33,3:34:40.84:264,0,41	1/1:21,2:23:15.28:269,15,0	0/0:31,0:30:81.17:0,81,597	1/1:29,0:25:41.18:277,41,0	0/0:34,0:28:81.99:0,82,619	0/0:16,0:15:35.86:0,36,287	0/0:14,0:13:38.20:0,38,290	0/0:32,0:31:87.38:0,87,694	0/0:24,0:24:65.39:0,65,510	0/0:40,0:40:86.83:0,87,671	0/0:40,0:40:85.47:0,85,728	0/0:27,0:26:63.68:0,64,446	0/0:14,0:14:26.85:0,27,204	0/0:22,0:17:47.73:0,48,378	0/0:32,0:30:88.37:0,88,690	0/0:6,0:6:14.88:0,15,114	0/0:33,0:32:82.09:0,82,567	0/0:18,0:17:45.75:0,46,324	0/0:15,0:14:27.28:0,27,208	0/1:24,1:24:4.43:185,0,4	0/0:39,0:38:99:0,107,782	0/0:29,0:27:73.97:0,74,575	0/0:16,0:15:44.28:0,44,333
chr10	109994541	.	A	ACC	2940.61	PASS	AB=0.900;AC=10;AF=0.179;AN=56;BaseQRankSum=12.011;DP=758;FS=3.681;HRun=0;HaplotypeScore=136.4900;InbreedingCoeff=0.0478;MQ=48.50;MQ0=33;MQRankSum=-9.678;QD=12.10;ReadPosRankSum=6.199;VQSLOD=3.3415;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:61.85:0,62,863	0/0:13,0:13:29.14:0,29,302	0/0:33,0:11:22.69:0,23,283	0/1:36,0:10:5.32:5,0,128	0/1:32,6:37:99:564,0,135	0/1:24,10:32:99:589,0,115	1/1:11,12:23:19.12:690,19,0	0/0:36,0:35:84.77:0,85,901	0/1:23,9:28:28.22:711,0,28	0/0:37,0:31:71.01:0,71,741	0/0:19,0:19:39.67:0,40,462	0/0:15,0:14:12.34:0,12,88	0/0:32,0:31:17.67:0,18,275	0/1:22,0:22:9.49:9,0,73	0/0:35,0:36:41.37:0,41,341	0/0:40,0:40:72.16:0,72,1169	0/0:25,0:24:57.20:0,57,658	0/0:13,0:13:27.96:0,28,337	0/0:26,0:21:48.04:0,48,552	0/0:31,0:31:80.24:0,80,963	0/0:9,0:9:20.44:0,20,183	0/0:12,0:33:29.05:0,29,205	0/1:19,0:18:50.38:50,0,67	0/1:14,0:13:4.15:4,0,91	0/1:18,7:24:99:461,0,200	0/0:39,0:38:85.32:0,85,889	0/0:31,0:29:70.82:0,71,827	0/0:13,0:12:36.10:0,36,436
chr10	109994593	.	TAGTAC	T	6486.36	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.996;DP=631;FS=3.638;HRun=0;HaplotypeScore=140.2092;InbreedingCoeff=0.9948;MQ=77.52;MQ0=0;MQRankSum=-10.890;QD=54.51;ReadPosRankSum=1.090;VQSLOD=5.5380;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.16:0,60,1859	0/0:13,0:13:39.13:0,39,1275	0/0:16,0:16:15.61:0,16,916	0/0:17,0:17:48.09:0,48,1156	1/1:1,31:32:75.26:1740,75,0	1/1:0,32:32:69.24:1607,69,0	1/1:0,12:13:30.10:695,30,0	0/0:34,0:34:99:0,99,3136	1/1:0,23:23:57.20:1327,57,0	0/0:24,0:24:72.25:0,72,2391	0/0:24,0:24:72.25:0,72,2355	0/0:24,0:24:72.25:0,72,2383	0/0:24,0:24:72.25:0,72,2395	0/0:23,0:23:69.24:0,69,2223	0/0:30,0:30:90.31:0,90,2990	0/0:29,1:28:20.43:0,20,2731	0/0:10,0:10:27.09:0,27,825	0/0:8,0:8:24.08:0,24,799	0/0:16,0:16:48.16:0,48,1587	0/0:28,0:28:84.29:0,84,2739	0/0:26,0:26:78.27:0,78,2599	0/0:23,0:23:51.18:0,51,1695	0/0:28,0:28:84.29:0,84,2797	0/0:25,0:25:69.24:0,69,2268	1/1:0,19:19:48.16:1117,48,0	0/0:32,0:32:96.33:0,96,3200	0/0:25,0:25:75.26:0,75,2482	0/0:11,0:11:33.11:0,33,1099
chr10	109995417	.	C	CAAAA	2204.13	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.666;DP=737;FS=0.511;HRun=4;HaplotypeScore=119.1540;InbreedingCoeff=0.9666;MQ=70.09;MQ0=0;MQRankSum=-4.576;QD=22.72;ReadPosRankSum=-0.947;VQSLOD=-0.3931;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1768	0/0:8,0:8:24.08:0,24,420	0/0:19,0:16:38.74:0,39,536	0/0:18,0:19:39.74:0,40,525	1/1:2,14:16:14.92:176,15,0	1/1:14,0:14:33.11:460,33,0	1/1:19,0:19:54.13:802,54,0	0/0:24,0:24:66.16:0,66,1032	1/1:1,26:28:5.93:99,6,0	0/0:33,0:33:96.31:0,96,1690	0/0:22,0:22:66.20:0,66,1160	0/0:34,0:34:96.31:0,96,1715	0/0:34,0:34:96.22:0,96,1658	0/0:31,0:31:87.26:0,87,1494	0/0:40,0:40:99:0,117,1985	0/0:35,0:35:99:0,102,1781	0/0:34,0:34:93.27:0,93,1613	0/0:30,0:30:81.22:0,81,1387	0/0:26,0:26:78.23:0,78,1340	0/0:12,0:12:30.10:0,30,549	0/0:37,0:37:99:0,108,1844	0/0:25,0:25:69.22:0,69,1236	0/0:22,0:22:60.17:0,60,1069	0/0:31,0:31:90.18:0,90,1505	1/1:20,0:20:57.02:836,57,0	0/0:40,0:40:99:0,114,2055	0/0:41,0:41:99:0,117,2085	0/0:5,0:5:15.03:0,15,248
chr10	109995746	.	TA	T	764.50	PASS	AB=0.583;AC=9;AF=0.161;AN=56;BaseQRankSum=0.306;DP=420;FS=13.364;HRun=3;HaplotypeScore=66.7779;InbreedingCoeff=0.7890;MQ=72.43;MQ0=1;MQRankSum=-4.460;QD=12.96;ReadPosRankSum=-2.503;VQSLOD=0.8082;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:29.97:0,30,332	0/0:5,0:5:11.97:0,12,99	0/0:24,0:16:6.59:0,7,225	0/0:12,0:9:20.97:0,21,201	0/1:2,5:7:5:48,0,5	1/1:11,2:13:15.02:158,15,0	1/1:12,6:18:53.94:510,54,0	0/0:16,0:16:29.82:0,30,263	1/1:0,4:4:3.01:36,3,0	0/0:12,0:12:30.06:0,30,338	0/0:14,0:14:19.45:0,19,193	0/0:33,0:33:79.43:0,79,541	0/0:15,0:15:39.33:0,39,216	0/0:18,0:18:35.89:0,36,207	0/0:21,0:21:48.53:0,49,299	0/0:15,0:15:33.50:0,33,397	0/0:28,0:28:62.22:0,62,631	0/0:9,0:9:17.99:0,18,167	0/0:17,0:17:38.83:0,39,368	0/0:7,0:7:8.54:0,9,111	0/0:10,0:10:20.06:0,20,210	0/0:15,0:15:34.39:0,34,258	0/0:16,0:16:37.23:0,37,225	0/0:19,0:18:40.04:0,40,243	1/1:1,16:17:15.03:165,15,0	0/0:13,0:13:11.16:0,11,277	0/0:17,0:16:35.73:0,36,393	0/0:9,0:9:23.95:0,24,254
chr10	109995749	.	ACC	A	2563.97	PASS	AB=0.990;AC=18;AF=0.321;AN=56;BaseQRankSum=2.717;DP=424;FS=13.303;HRun=12;HaplotypeScore=63.7982;InbreedingCoeff=0.6078;MQ=70.83;MQ0=1;MQRankSum=-0.285;QD=12.95;ReadPosRankSum=7.496;VQSLOD=0.1856;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:23.87:0,24,251	0/0:3,0:5:6:0,6,53	0/1:24,0:16:3.89:4,0,197	0/0:13,0:8:8.97:0,9,81	0/1:9,0:9:8.28:8,0,15	0/1:15,0:15:28.16:28,0,28	0/1:18,0:18:14.24:14,0,138	0/0:13,0:13:9.03:0,9,130	0/0:4,0:4:2.94:0,3,18	0/0:12,0:12:18.06:0,18,269	0/0:13,0:14:20.51:0,21,213	1/1:11,20:33:65:612,65,0	1/1:1,13:15:41.83:406,42,0	1/1:2,14:16:33.54:337,34,0	1/1:5,13:19:38.10:359,38,0	0/0:14,0:15:19.54:0,20,418	0/0:21,0:29:48.08:0,48,592	0/0:7,0:11:15.03:0,15,186	0/0:17,0:17:2.07:0,2,221	0/0:6,0:7:11.51:0,12,122	0/0:8,0:10:12.83:0,13,167	1/1:5,9:15:32.74:317,33,0	1/1:3,12:16:44.43:418,44,0	1/1:4,12:16:26.77:256,27,0	0/0:17,0:17:11.42:0,11,66	0/0:11,0:13:22.88:0,23,256	0/0:19,0:18:35.24:0,35,416	0/0:10,0:10:27:0,27,326
chr10	109996350	.	G	GTGGGC	11009.96	PASS	AB=0.824;AC=20;AF=0.357;AN=56;BaseQRankSum=-12.261;DP=639;FS=3.333;HRun=0;HaplotypeScore=119.5717;InbreedingCoeff=0.8567;MQ=82.86;MQ0=3;MQRankSum=-3.240;QD=40.78;ReadPosRankSum=-0.085;VQSLOD=4.7661;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,18:36:60.21:1697,60,0	0/0:12,0:12:24.05:0,24,411	0/0:31,0:29:37.62:0,38,576	0/1:29,0:27:10.28:10,0,438	0/0:11,0:11:30.09:0,30,526	0/0:30,0:30:72.23:0,72,1332	0/0:34,0:34:69.20:0,69,1224	1/1:22,6:28:27.09:710,27,0	0/0:25,0:25:57.20:0,57,1082	0/0:26,0:26:66.23:0,66,1236	0/0:12,0:12:27.09:0,27,496	0/0:28,0:28:60.17:0,60,1060	0/0:21,0:21:51.14:0,51,913	0/0:26,0:26:57.18:0,57,1049	0/0:21,0:21:51.17:0,51,956	0/0:23,0:23:60.17:0,60,1061	1/1:11,19:31:54.18:1515,54,0	1/1:11,21:32:60.21:1740,60,0	1/1:16,7:24:30.09:776,30,0	1/1:3,6:10:21.07:560,21,0	1/1:14,16:30:42.76:1210,43,0	0/0:8,0:8:21.07:0,21,398	0/0:10,0:10:27.09:0,27,512	0/0:32,0:32:63.22:0,63,1193	0/0:19,0:19:54.19:0,54,1025	0/1:10,12:22:5.77:1319,0,6	1/1:10,11:21:42.14:1215,42,0	1/1:3,2:4:9.03:258,9,0
chr10	109998961	.	T	TGTGCAC	5765.57	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-5.583;DP=552;FS=10.594;HRun=0;HaplotypeScore=116.6779;InbreedingCoeff=0.9917;MQ=86.44;MQ0=0;MQRankSum=-11.982;QD=68.64;ReadPosRankSum=-1.060;VQSLOD=5.0772;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.27:0,78,1795	0/0:9,0:9:24.08:0,24,567	0/0:16,0:16:48.14:0,48,1053	0/0:26,0:26:69.24:0,69,1560	1/1:6,8:14:12.04:379,12,0	1/1:8,9:19:33.11:1167,33,0	1/1:4,11:16:35.26:1266,35,0	0/0:16,0:16:36.11:0,36,807	1/1:1,10:11:33.11:1168,33,0	0/0:23,0:23:66.21:0,66,1473	0/0:11,0:11:30.10:0,30,685	0/0:19,0:19:54.19:0,54,1269	0/0:16,0:16:48.15:0,48,1088	0/0:23,0:23:63.22:0,63,1460	0/0:31,0:31:93.31:0,93,2126	0/0:38,0:38:99:0,111,2575	0/0:25,0:25:63.22:0,63,1489	0/0:18,0:18:51.18:0,51,1182	0/0:10,0:10:27.09:0,27,638	0/0:12,0:12:32.69:0,33,673	0/0:20,0:20:57.15:0,57,1150	0/0:16,0:16:45.15:0,45,1018	0/0:16,0:16:45.12:0,45,971	0/0:29,0:29:84.26:0,84,1935	1/1:8,15:24:51.18:1785,51,0	0/0:22,0:22:51.16:0,51,1094	0/0:25,0:25:72.23:0,72,1655	0/0:19,0:19:51.18:0,51,1203
chr10	109999296	.	CAGTT	C	4229.59	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.900;DP=659;FS=4.200;HRun=0;HaplotypeScore=107.1597;InbreedingCoeff=0.9979;MQ=72.23;MQ0=0;MQRankSum=-2.368;QD=45.97;ReadPosRankSum=2.737;VQSLOD=5.6839;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,3207	0/0:10,0:10:30.10:0,30,810	0/0:26,0:26:69.22:0,69,1576	0/0:31,0:30:74.45:0,74,1720	1/1:0,20:20:57.19:1063,57,0	1/1:1,19:20:51.17:948,51,0	1/1:0,16:16:33.11:626,33,0	0/0:27,0:27:78.27:0,78,2075	1/1:0,21:20:48.16:891,48,0	0/0:23,0:23:66.23:0,66,1728	0/0:20,0:20:57.20:0,57,1441	0/0:38,0:38:99:0,111,2898	0/0:19,0:19:57.20:0,57,1538	0/0:35,0:35:96.31:0,96,2491	0/0:30,0:30:87.30:0,87,2309	0/0:28,0:28:81.26:0,81,1988	0/0:29,0:29:84.29:0,84,2192	0/0:33,0:33:93.31:0,93,2379	0/0:21,0:21:60.21:0,60,1555	0/0:8,0:8:21.07:0,21,538	0/0:29,0:29:84.24:0,84,1996	0/0:17,0:17:51.18:0,51,1354	0/0:15,0:15:45.15:0,45,1210	0/0:24,0:24:69.23:0,69,1825	1/1:0,15:15:39.13:701,39,0	0/0:28,0:28:84.29:0,84,2183	0/0:26,0:26:75.24:0,75,1825	0/0:7,0:7:21.07:0,21,566
chr10	110000677	.	GAAC	G	4926.16	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.997;DP=587;FS=2.366;HRun=0;HaplotypeScore=88.5339;InbreedingCoeff=0.9890;MQ=89.98;MQ0=0;MQRankSum=-3.487;QD=39.73;ReadPosRankSum=3.574;VQSLOD=6.0308;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,2237	0/0:6,0:6:15.05:0,15,308	0/0:33,0:33:90.29:0,90,1904	0/0:16,0:16:40.72:0,41,905	0/0:15,0:15:39.13:0,39,879	0/0:11,0:11:33.11:0,33,744	0/0:32,0:32:90.29:0,90,1946	0/0:28,0:28:81.28:0,81,1786	0/0:16,0:16:48.16:0,48,1049	0/0:19,0:19:54.18:0,54,1121	0/0:12,0:12:36.12:0,36,810	1/1:0,21:19:57.19:948,57,0	1/1:0,13:13:36.12:598,36,0	1/1:2,16:18:39.13:649,39,0	1/1:0,36:36:96.33:1575,96,0	0/0:29,0:29:87.30:0,87,1925	0/0:39,0:39:99:0,114,2545	0/0:32,0:32:96.33:0,96,2092	0/0:14,0:14:33.11:0,33,708	0/0:6,0:6:18.06:0,18,390	0/0:43,0:43:99:0,126,2787	1/1:2,9:10:24.04:358,24,0	1/1:0,9:9:11.71:199,12,0	1/1:0,16:16:36.12:599,36,0	0/0:14,0:14:39.13:0,39,880	0/0:18,0:18:51.07:0,51,1079	0/0:24,0:24:69.24:0,69,1557	0/0:18,0:18:54.19:0,54,1199
chr10	110000857	.	CG	C	916.94	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=5.049;DP=332;FS=39.834;HRun=2;HaplotypeScore=38.0466;InbreedingCoeff=0.8589;MQ=57.25;MQ0=11;MQRankSum=-2.079;QD=11.46;ReadPosRankSum=-2.195;VQSLOD=-0.6443;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:65.93:0,66,844	0/0:9,0:9:24.04:0,24,293	0/0:15,0:5:3.63:0,4,17	0/0:8,0:4:8.46:0,8,45	1/1:7,3:10:24.02:236,24,0	1/1:6,0:6:15:149,15,0	1/1:0,7:6:12:134,12,0	0/0:21,0:18:44.98:0,45,528	1/1:0,2:2:3.01:39,3,0	0/0:11,0:11:33.07:0,33,392	0/0:8,0:8:21.06:0,21,293	1/1:8,0:8:8.61:50,9,0	1/1:7,0:7:5.77:33,6,0	1/1:6,0:6:2.97:20,3,0	1/1:9,0:9:16.94:94,17,0	0/0:17,0:17:45.06:0,45,567	0/0:20,0:20:54.14:0,54,748	0/0:24,0:24:60.14:0,60,821	0/0:14,0:12:20.81:0,21,260	0/0:11,0:9:23.99:0,24,250	0/0:12,0:12:23.92:0,24,264	1/1:4,0:3:5.59:34,6,0	1/1:8,0:7:11.58:70,12,0	1/1:5,0:5:14.93:115,15,0	1/1:6,2:8:15.01:152,15,0	0/0:20,0:18:50.99:0,51,588	0/0:24,0:24:69.08:0,69,905	0/0:9,0:9:21.05:0,21,292
chr10	110000858	.	GGA	G	1021.88	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=5.187;DP=345;FS=36.829;HRun=0;HaplotypeScore=43.1674;InbreedingCoeff=0.7937;MQ=57.42;MQ0=11;MQRankSum=-0.958;QD=10.76;ReadPosRankSum=-0.947;VQSLOD=1.2163;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:81.13:0,81,1303	0/0:9,0:9:24.05:0,24,405	0/1:16,0:5:6.38:9,0,6	0/0:7,0:4:8.77:0,9,60	1/1:10,0:10:11.72:155,12,0	1/1:6,0:6:9.27:57,9,0	1/1:7,0:6:9.08:37,9,0	0/0:21,0:18:47.98:0,48,724	1/1:2,0:2:1.55:4,2,0	0/0:11,0:11:33.09:0,33,514	0/0:8,0:8:21.06:0,21,387	1/1:0,8:8:9.03:131,9,0	1/1:0,6:6:6.02:79,6,0	1/1:0,6:6:3.01:47,3,0	1/1:0,9:9:18.05:256,18,0	0/0:19,0:19:54.09:0,54,823	0/0:22,0:22:60.13:0,60,1053	0/0:24,0:24:67.06:0,67,1184	0/0:14,0:12:26.81:0,27,397	0/0:12,0:10:29.95:0,30,347	0/0:11,1:12:26.93:0,27,359	1/1:1,3:3:6.02:83,6,0	1/1:1,7:8:12.04:178,12,0	1/1:5,0:5:14.93:115,15,0	1/1:8,0:8:2.64:71,3,0	0/0:23,0:21:62.50:0,62,818	0/0:27,0:27:78.06:0,78,1246	0/0:9,0:9:21.05:0,21,387
chr10	110000975	.	AAAG	A	1187.99	PASS	AB=0.869;AC=10;AF=0.192;AN=52;BaseQRankSum=5.924;DP=449;FS=41.455;HRun=0;HaplotypeScore=72.3094;InbreedingCoeff=0.1980;MQ=36.48;MQ0=41;MQRankSum=-2.631;QD=8.37;ReadPosRankSum=-5.059;VQSLOD=-0.5036;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:47.58:0,48,1067	0/0:8,0:7:21.06:0,21,357	./.	./.	0/1:16,5:17:33.34:227,0,33	0/1:7,9:13:46.11:189,0,46	1/1:11,8:16:36.87:421,37,0	0/0:15,0:13:29.72:0,30,667	0/1:9,4:10:46.54:170,0,47	0/0:13,0:12:3.14:0,3,327	0/0:15,0:13:30.08:0,30,528	0/0:14,0:11:13.99:0,14,289	0/0:7,0:7:20.86:0,21,375	0/1:17,0:14:14.08:14,0,368	0/0:15,0:12:27.25:0,27,545	0/0:18,0:15:9.33:0,9,490	0/0:35,0:29:24.81:0,25,1077	0/0:28,0:22:0.72:0,1,753	0/0:16,0:14:6.66:0,7,602	0/0:9,0:7:18:0,18,274	0/0:22,0:22:23.12:0,23,642	0/0:8,0:5:9.42:0,9,135	0/1:12,0:8:2.33:2,0,168	0/0:17,0:13:28.91:0,29,507	1/1:14,4:18:26.82:272,27,0	0/0:16,0:14:13.80:0,14,434	0/1:26,0:25:39.79:40,0,796	0/0:11,0:9:15.72:0,16,227
chr10	110001854	.	AATCC	A	2938.24	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=10.644;DP=535;FS=6.785;HRun=0;HaplotypeScore=91.0994;InbreedingCoeff=0.8858;MQ=79.21;MQ0=1;MQRankSum=-5.455;QD=30.93;ReadPosRankSum=0.775;VQSLOD=2.9675;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.19:0,60,1539	0/0:9,0:9:27.09:0,27,715	0/0:14,0:14:33.07:0,33,770	0/1:12,0:12:3.63:4,0,448	1/1:2,17:19:17.76:305,18,0	1/1:2,18:20:48.12:874,48,0	1/1:3,21:24:45.15:849,45,0	0/0:32,0:32:93.32:0,93,2506	1/1:0,15:14:42.14:797,42,0	0/0:13,0:13:39.13:0,39,1022	0/0:10,0:10:27.09:0,27,728	0/0:25,0:25:72.25:0,72,1944	0/0:23,0:23:69.24:0,69,1859	0/0:31,0:31:93.32:0,93,2486	0/0:30,0:29:90.31:0,90,2408	0/0:24,1:25:18.29:0,18,1880	0/0:34,0:34:99:0,99,2650	0/0:30,0:30:87.30:0,87,2288	0/0:23,0:23:69.24:0,69,1843	0/0:10,0:10:30.10:0,30,777	0/0:40,0:40:99:0,120,3177	0/0:6,0:6:18.06:0,18,485	0/0:3,0:3:9.03:0,9,243	0/0:19,0:19:45.15:0,45,1174	1/1:0,5:5:15.05:283,15,0	0/0:16,0:16:45.15:0,45,1204	0/0:20,0:20:60.21:0,60,1586	0/0:3,0:3:9.01:0,9,186
chr10	110005754	.	CACA	C	5353.61	PASS	AB=0.948;AC=28;AF=0.500;AN=56;BaseQRankSum=14.657;DP=796;FS=7.771;HRun=0;HaplotypeScore=124.2430;InbreedingCoeff=0.6893;MQ=69.20;MQ0=5;MQRankSum=1.324;QD=12.25;ReadPosRankSum=4.296;VQSLOD=4.1093;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:74.06:0,74,1935	0/0:13,0:13:24.33:0,24,400	0/0:36,0:30:15.02:0,15,237	0/0:26,0:17:9.03:0,9,172	1/1:8,0:25:2.85:21,3,0	1/1:2,0:17:17.86:126,18,0	1/1:5,0:25:23.53:167,24,0	0/0:31,0:31:39.07:0,39,655	1/1:10,0:25:23.81:168,24,0	0/0:21,0:21:39.13:0,39,714	0/1:11,1:12:24.13:24,0,222	1/1:16,28:43:54.75:886,55,0	1/1:11,24:35:60.20:818,60,0	1/1:11,21:32:57.19:777,57,0	1/1:13,26:39:63.21:859,63,0	0/1:35,2:37:6.58:7,0,1180	0/1:32,3:35:6.54:7,0,1251	0/0:25,0:25:50.39:0,50,999	0/1:19,0:19:19.84:20,0,332	0/0:16,0:15:30.01:0,30,511	0/0:63,0:62:99:0,141,2657	1/1:9,12:19:23.94:327,24,0	1/1:5,8:13:18.06:245,18,0	1/1:13,23:36:54.13:736,54,0	1/1:3,0:22:23.81:168,24,0	0/0:29,0:29:42.15:0,42,641	0/0:27,1:28:7.25:0,7,802	0/0:9,0:9:14.97:0,15,252
chr10	110006266	.	AGG	A	6249.55	PASS	AB=0.611;AC=19;AF=0.339;AN=56;BaseQRankSum=0.545;DP=576;FS=17.915;HRun=10;HaplotypeScore=85.1626;InbreedingCoeff=0.8811;MQ=77.28;MQ0=1;MQRankSum=-0.420;QD=24.41;ReadPosRankSum=7.856;VQSLOD=2.3544;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:78.20:868,78,0	0/0:5,0:7:17.41:0,17,223	0/0:30,0:28:11.22:0,11,441	0/0:16,0:15:23.91:0,24,224	0/0:6,0:7:5.19:0,5,32	0/0:14,0:14:1.70:0,2,153	0/0:23,0:24:36.82:0,37,374	1/1:5,9:14:24.05:266,24,0	0/0:19,0:19:19.61:0,20,392	0/0:15,0:16:15.92:0,16,216	0/0:13,0:13:26.77:0,27,369	0/0:24,0:25:53.63:0,54,738	0/0:15,0:16:41.59:0,42,553	0/0:24,0:25:65.60:0,66,847	0/0:23,0:27:56.91:0,57,746	0/0:21,1:24:64.65:0,65,867	1/1:6,25:31:63.16:702,63,0	1/1:3,24:27:63.16:702,63,0	1/1:3,9:12:30.05:321,30,0	1/1:0,6:6:18.05:200,18,0	1/1:10,59:69:99:1603,144,0	0/0:8,0:8:18.03:0,18,223	0/0:9,0:9:14.72:0,15,223	0/0:28,0:31:85.72:0,86,1188	0/0:8,0:8:11.99:0,12,101	0/1:8,14:22:2.53:418,0,3	1/1:4,21:25:54.14:601,54,0	1/1:2,16:18:51.14:567,51,0
chr10	110006275	.	GGT	G	1528.66	PASS	AB=0.976;AC=14;AF=0.250;AN=56;BaseQRankSum=12.596;DP=552;FS=11.163;HRun=0;HaplotypeScore=95.2823;InbreedingCoeff=0.4442;MQ=73.67;MQ0=1;MQRankSum=-2.809;QD=5.99;ReadPosRankSum=9.931;VQSLOD=0.8216;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:42,1:43:99:221,0,175	0/0:8,0:8:20.26:0,20,299	0/0:25,0:23:37.46:0,37,625	0/0:14,0:13:26.96:0,27,258	0/0:4,0:4:2.62:0,3,16	0/0:13,0:13:26.39:0,26,310	0/0:21,0:21:48.05:0,48,579	0/1:11,0:11:46.35:52,0,46	0/0:17,0:17:44.73:0,45,598	0/0:12,0:12:26.88:0,27,329	0/0:12,0:12:26.78:0,27,425	0/0:21,0:21:62.98:0,63,800	0/0:15,0:15:45.05:0,45,725	0/0:27,0:27:80.36:0,80,1143	0/0:25,0:25:66.78:0,67,979	0/0:25,0:24:68.98:0,69,1115	1/1:27,0:27:14.92:176,15,0	1/1:26,0:26:12.59:166,13,0	0/1:13,1:14:63.23:64,0,63	0/1:7,0:7:1.36:63,0,1	1/1:64,2:66:19.40:447,19,0	0/0:7,0:7:20.86:0,21,299	0/0:7,0:7:17.52:0,18,275	0/0:36,0:36:99:0,105,1548	0/0:8,0:8:18.02:0,18,185	0/1:17,1:18:75.95:141,0,76	0/1:24,0:24:14.75:183,0,15	1/1:17,2:19:24.12:192,24,0
chr10	110012622	.	GCA	G	3529.71	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=5.282;DP=528;FS=3.257;HRun=0;HaplotypeScore=120.4095;InbreedingCoeff=0.8745;MQ=62.84;MQ0=11;MQRankSum=-5.065;QD=15.08;ReadPosRankSum=0.301;VQSLOD=3.7756;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,3:20:17.99:205,18,0	0/0:8,0:8:18:0,18,211	0/0:23,0:18:35.15:0,35,605	0/0:23,0:21:60.13:0,60,876	1/1:6,0:5:3:25,3,0	1/1:17,0:16:13.14:106,13,0	1/1:20,0:20:2.76:30,3,0	1/1:16,4:19:48.11:619,48,0	0/1:17,0:17:3.29:43,0,3	0/0:16,0:16:39.98:0,40,589	0/0:10,1:11:21.04:0,21,285	0/0:30,0:30:53.72:0,54,841	0/0:22,0:22:47.51:0,48,661	0/0:28,0:28:41.64:0,42,567	0/0:33,0:31:44.50:0,45,709	0/0:33,0:33:59.83:0,60,836	1/1:10,6:15:27.05:322,27,0	1/1:10,3:12:30.02:354,30,0	1/1:10,4:12:24.02:270,24,0	1/1:3,5:7:8.37:64,8,0	1/1:27,8:34:39.12:546,39,0	0/0:9,0:9:18.05:0,18,256	0/0:6,0:6:18.05:0,18,283	0/0:51,0:50:98.43:0,98,1417	1/1:18,0:18:8.77:57,9,0	1/1:9,6:14:36.10:445,36,0	1/1:6,2:8:18.52:216,19,0	1/1:3,3:6:18.05:228,18,0
chr10	110012628	.	GCA	G	238.28	PASS	AB=0.959;AC=15;AF=0.300;AN=50;BaseQRankSum=2.735;DP=647;FS=0.775;HRun=0;HaplotypeScore=139.8853;InbreedingCoeff=0.0291;MQ=52.89;MQ0=32;MQRankSum=1.728;QD=0.71;ReadPosRankSum=1.910;VQSLOD=2.5405;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:23:1.16:0,1,8	0/0:7,0:7:8.94:0,9,96	./.	./.	./.	1/1:18,0:17:11.76:101,12,0	0/1:31,0:28:12.49:23,0,12	0/0:32,0:24:11.66:0,12,56	1/1:23,0:19:9.73:48,10,0	0/0:19,0:16:22.10:0,22,211	0/0:8,0:8:9.03:0,9,137	0/1:35,1:34:19.11:19,0,348	0/1:20,2:24:23.14:23,0,313	0/1:35,1:35:12.96:13,0,203	0/1:36,1:34:26.29:26,0,360	0/1:30,1:31:16.49:16,0,275	0/0:19,0:17:0.46:0,0,1	0/0:18,0:14:8.80:0,9,53	0/0:17,0:12:5.80:0,6,28	0/0:8,0:6:2.74:0,3,12	0/0:72,1:57:2.88:0,3,23	0/1:9,0:9:8.14:8,0,38	0/0:7,0:7:9:0,9,110	0/1:58,3:57:85:85,0,406	1/1:18,0:19:2.83:14,3,0	0/0:18,0:17:2.45:0,2,8	0/1:8,0:8:0:0,0,0	0/0:8,0:6:6.65:0,7,18
chr10	110012676	.	CAT	C	310.18	PASS	AB=0.984;AC=14;AF=0.259;AN=54;BaseQRankSum=5.488;DP=948;FS=13.767;HRun=0;HaplotypeScore=153.9051;InbreedingCoeff=0.0458;MQ=27.71;MQ0=205;MQRankSum=-4.907;QD=0.66;ReadPosRankSum=-3.009;VQSLOD=1.2641;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:37,1:25:5.94:20,0,6	0/1:14,0:9:11.94:12,0,106	./.	0/0:7,0:1:2.84:0,3,14	0/0:18,0:10:3.39:0,3,17	0/1:17,0:13:5.18:32,0,5	0/0:46,1:30:10.80:0,11,219	0/1:92,0:31:85.99:86,0,276	1/1:20,1:17:8.88:50,9,0	0/0:55,1:30:27.35:0,27,794	0/0:10,1:7:12:0,12,138	0/0:49,0:38:33.08:0,33,879	0/0:28,0:23:2.56:0,3,429	0/0:48,0:37:30.26:0,30,609	0/0:46,1:28:3.26:0,3,571	0/0:40,0:29:33.67:0,34,588	0/1:32,0:22:9.50:41,0,10	0/1:18,0:11:42.41:42,0,57	0/1:43,0:13:54.38:54,0,95	0/0:11,0:3:5.95:0,6,41	0/1:118,4:68:5.81:9,0,6	0/0:19,0:9:12.01:0,12,157	0/0:16,0:12:24.01:0,24,354	0/0:68,1:55:47.28:0,47,1003	0/1:12,0:11:0.01:0,0,0	0/1:48,0:28:87.90:88,0,178	0/0:6,0:5:2.94:0,3,18	1/1:9,0:4:4.69:20,5,0
chr10	110012740	.	CCA	C	200.22	PASS	AB=0.981;AC=14;AF=0.280;AN=50;BaseQRankSum=0.025;DP=1089;FS=0.913;HRun=0;HaplotypeScore=157.5136;InbreedingCoeff=-0.2170;MQ=23.16;MQ0=326;MQRankSum=-0.677;QD=0.37;ReadPosRankSum=-1.281;VQSLOD=2.0628;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,5:29:2.90:0,3,33	./.	./.	./.	0/0:21,0:9:2.98:0,3,23	0/0:30,0:21:5.07:0,5,24	0/0:83,0:55:6.58:0,7,26	1/1:43,1:9:2.99:24,3,0	0/1:41,1:28:1.87:2,0,67	0/1:47,0:23:13.95:14,0,152	0/0:17,0:10:4.83:0,5,49	0/1:59,1:42:50.93:51,0,160	0/0:31,0:17:10.83:0,11,100	0/1:39,0:23:1.36:14,0,1	0/0:43,0:23:2.96:0,3,19	0/0:41,0:28:2.53:0,3,214	0/1:38,1:22:22.15:22,0,62	0/1:35,0:16:17.86:47,0,18	0/1:26,2:12:24.80:25,0,96	0/0:13,2:6:3.01:0,3,38	0/0:144,1:85:7.97:0,8,139	0/0:26,0:11:0.21:0,0,4	0/0:24,0:11:9.01:0,9,91	0/1:87,0:55:49.96:50,0,139	0/1:29,0:16:4.77:5,0,28	0/1:49,0:21:18.30:51,0,18	0/1:16,2:6:0.11:0,0,0	0/1:20,0:12:21.46:21,0,22
chr10	110013631	.	CT	C	2020.61	PASS	AB=0.700;AC=19;AF=0.339;AN=56;BaseQRankSum=4.297;DP=674;FS=6.107;HRun=14;HaplotypeScore=83.7334;InbreedingCoeff=0.6907;MQ=77.97;MQ0=5;MQRankSum=-0.438;QD=7.80;ReadPosRankSum=2.108;VQSLOD=2.9809;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,17:27:25.68:191,26,0	0/0:8,0:9:23.73:0,24,188	0/0:37,0:23:22.46:0,22,193	0/0:38,2:26:0.54:0,1,113	0/0:28,0:31:59.52:0,60,495	0/0:21,0:21:24.34:0,24,339	0/0:12,0:12:26.77:0,27,225	1/1:13,14:28:23.30:254,23,0	0/0:23,0:23:38.81:0,39,337	0/0:31,3:35:33.29:0,33,393	0/0:19,2:23:15.27:0,15,311	0/0:29,2:31:17.91:0,18,390	0/0:17,0:17:33.62:0,34,305	0/0:25,1:29:30.47:0,30,382	0/0:28,0:28:62.99:0,63,560	0/0:25,1:29:33.07:0,33,406	0/1:11,27:41:12.94:285,0,13	0/1:5,13:19:22.98:149,0,23	1/1:14,12:26:10.60:209,11,0	1/1:8,19:28:43.98:274,44,0	1/1:4,14:19:31.77:211,32,0	0/0:13,0:13:23.35:0,23,190	0/0:12,2:14:30.01:0,30,271	0/0:19,2:21:1.66:0,2,273	0/1:15,1:18:12.84:13,0,130	1/1:7,19:27:32.36:305,32,0	1/1:4,12:17:34.68:229,35,0	1/1:1,8:9:14.87:103,15,0
chr10	110014194	.	ATT	A	18031.24	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=15.727;DP=755;FS=12.806;HRun=2;HaplotypeScore=90.8494;InbreedingCoeff=0.9885;MQ=81.76;MQ0=1;MQRankSum=-2.235;QD=45.08;ReadPosRankSum=2.033;VQSLOD=3.6265;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,50:50:99:2200,135,0	0/0:16,0:16:48.16:0,48,975	0/0:21,0:21:59.69:0,60,1078	0/0:19,0:19:50.66:0,51,934	1/1:0,25:25:75.26:1224,75,0	1/1:0,21:21:60.20:976,60,0	1/1:0,26:26:72.25:1175,72,0	1/1:0,29:29:84.26:1322,84,0	1/1:0,23:23:66.23:1077,66,0	0/0:15,0:15:45.15:0,45,915	0/0:16,0:16:48.15:0,48,939	0/0:38,0:38:99:0,114,2272	0/0:28,0:28:84.29:0,84,1689	0/0:25,0:25:75.24:0,75,1446	0/0:48,0:47:99:0,138,2804	0/0:48,0:48:99:0,144,2907	1/1:0,28:28:72.25:1175,72,0	1/1:0,24:24:69.24:1126,69,0	1/1:0,17:17:48.15:759,48,0	1/1:1,21:22:60.19:953,60,0	1/1:0,51:51:99:2200,135,0	0/0:26,0:26:78.27:0,78,1585	0/0:22,0:22:63.22:0,63,1280	0/0:33,0:33:99:0,99,2003	1/1:0,24:24:69.24:1126,69,0	1/1:1,22:23:8.24:1006,8,0	1/1:0,31:31:90.31:1468,90,0	1/1:0,6:6:15.05:244,15,0
chr10	110014652	.	C	CT	5043.67	PASS	AB=0.826;AC=31;AF=0.554;AN=56;BaseQRankSum=9.027;DP=723;FS=0.000;HRun=13;HaplotypeScore=139.4219;InbreedingCoeff=0.7743;MQ=68.91;MQ0=0;MQRankSum=-6.088;QD=11.06;ReadPosRankSum=-5.134;VQSLOD=1.7994;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,3:42:67.28:560,67,0	0/0:10,0:10:14.82:0,15,103	0/0:22,1:20:17.14:0,17,105	0/1:14,1:12:36.34:37,0,36	1/1:12,13:26:33.97:368,34,0	1/1:16,20:36:68.94:617,69,0	1/1:12,12:25:12.27:354,12,0	1/1:20,3:44:60.21:341,60,0	0/1:11,11:22:34.30:278,0,34	0/0:30,0:30:46.40:0,46,307	0/0:17,0:17:35.62:0,36,247	0/0:26,0:26:44.58:0,45,284	0/0:25,0:25:50.38:0,50,349	0/0:26,1:27:19.61:0,20,277	0/0:32,0:33:46.39:0,46,309	0/0:34,1:37:37.04:0,37,375	1/1:9,1:16:34.66:198,35,0	1/1:9,3:20:46.18:302,46,0	1/1:18,3:23:33.85:228,34,0	1/1:23,3:40:63.71:395,64,0	1/1:9,2:11:14.83:107,15,0	0/0:19,0:19:38.61:0,39,267	0/0:20,0:20:32.54:0,33,223	0/1:32,3:36:10.21:10,0,363	1/1:8,12:21:35.19:353,35,0	1/1:18,1:27:43.70:283,44,0	1/1:25,3:40:83.97:532,84,0	1/1:9,1:11:11.73:81,12,0
chr10	110014701	.	A	AT	15869.25	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-10.069;DP=643;FS=5.844;HRun=0;HaplotypeScore=69.6971;InbreedingCoeff=0.9919;MQ=78.09;MQ0=0;MQRankSum=-4.438;QD=45.21;ReadPosRankSum=-0.829;VQSLOD=4.6634;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,39:41:99:1751,111,0	0/0:9,0:9:27.08:0,27,361	0/0:18,0:18:52.45:0,52,653	0/0:17,0:16:42.14:0,42,585	1/1:0,21:21:63.21:1007,63,0	1/1:0,27:27:78.27:1246,78,0	1/1:0,24:24:66.23:1055,66,0	1/1:0,30:30:90.28:1393,90,0	1/1:0,18:18:51.17:815,51,0	0/0:26,0:26:78.26:0,78,1091	0/0:19,0:19:57.19:0,57,797	0/0:27,0:27:81.26:0,81,1116	0/0:26,0:26:78.24:0,78,1070	0/0:24,0:24:72.23:0,72,986	0/0:36,0:36:99:0,105,1467	0/0:37,0:37:99:0,111,1551	1/1:0,18:18:54.18:862,54,0	1/1:0,15:15:39.13:622,39,0	1/1:1,23:24:69.22:1074,69,0	1/1:0,21:21:63.21:1006,63,0	1/1:0,23:23:66.23:1055,66,0	0/0:15,0:15:45.14:0,45,612	0/0:15,0:15:45.14:0,45,610	0/0:23,0:23:69.23:0,69,963	1/1:0,20:20:60.20:957,60,0	1/1:2,31:33:93.30:1462,93,0	1/1:1,31:32:90.31:1421,90,0	1/1:0,4:4:9.03:144,9,0
chr10	110017355	.	G	GGGGA	1632.13	PASS	AB=1.000;AC=27;AF=0.519;AN=52;BaseQRankSum=-1.679;DP=389;FS=9.922;HRun=0;HaplotypeScore=84.7430;InbreedingCoeff=0.7778;MQ=77.01;MQ0=1;MQRankSum=0.258;QD=9.22;ReadPosRankSum=-2.431;VQSLOD=1.1832;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:16:5.98:83,6,0	0/0:8,0:8:17.94:0,18,163	0/0:20,0:18:26.09:0,26,308	0/1:10,0:7:1.71:2,0,99	1/1:12,0:12:1.16:22,1,0	1/1:5,5:11:3:74,3,0	1/1:5,9:15:4.83:65,5,0	1/1:3,0:18:41.94:418,42,0	1/1:7,0:8:12:113,12,0	0/0:9,0:9:20.97:0,21,213	0/0:8,0:8:18.04:0,18,244	0/0:20,0:20:41.84:0,42,380	0/0:18,0:18:42.42:0,42,444	0/0:17,0:17:35.47:0,35,302	0/0:27,0:27:69.03:0,69,725	0/0:21,0:21:51.05:0,51,549	1/1:0,0:16:3.01:47,3,0	./.	1/1:6,9:16:35.99:417,36,0	1/1:6,0:6:11.96:105,12,0	1/1:1,0:11:2.96:22,3,0	0/0:10,0:10:24.01:0,24,257	0/0:8,0:8:17.72:0,18,200	0/0:20,0:20:47.77:0,48,448	1/1:10,0:10:23.76:219,24,0	1/1:7,0:17:18:175,18,0	1/1:1,8:11:6.13:64,6,0	./.
chr10	110019724	.	CTT	C	2529.75	PASS	AB=0.724;AC=20;AF=0.357;AN=56;BaseQRankSum=-0.674;DP=571;FS=8.847;HRun=15;HaplotypeScore=77.7016;InbreedingCoeff=0.7827;MQ=72.34;MQ0=9;MQRankSum=-0.270;QD=10.41;ReadPosRankSum=2.019;VQSLOD=2.0997;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,18:26:23.30:355,23,0	0/0:8,0:8:20.28:0,20,250	0/0:33,0:11:6.55:0,7,32	0/0:44,0:16:14.74:0,15,130	0/0:7,0:19:3.16:0,3,88	0/0:8,0:18:17.04:0,17,89	0/0:12,0:19:27.32:0,27,157	1/1:17,11:30:31.03:290,31,0	0/0:9,0:14:10.48:0,10,50	0/0:19,0:22:48.08:0,48,588	0/0:16,0:19:39.54:0,40,499	0/0:21,0:22:45.13:0,45,579	0/1:10,1:12:7.12:7,0,107	0/0:16,0:16:34.58:0,35,386	0/0:15,0:16:43.91:0,44,468	0/0:30,0:31:63.19:0,63,816	1/1:12,15:31:17.67:278,18,0	1/1:11,21:32:14.01:266,14,0	1/1:6,15:22:38.44:355,38,0	1/1:5,7:14:12.38:184,12,0	0/1:4,7:13:0.36:89,0,0	0/0:9,0:10:3.90:0,4,43	0/0:15,0:15:32.64:0,33,392	0/0:11,0:11:32.59:0,33,413	0/0:5,0:11:17.98:0,18,87	1/1:13,12:26:1.71:313,2,0	1/1:8,15:24:33.46:372,33,0	1/1:1,10:12:26.73:223,27,0
chr10	110022829	.	A	AT	14732.94	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-12.100;DP=829;FS=5.726;HRun=4;HaplotypeScore=84.3581;InbreedingCoeff=0.9759;MQ=81.82;MQ0=0;MQRankSum=-1.981;QD=34.34;ReadPosRankSum=-0.282;VQSLOD=5.0499;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,50:50:99:1929,141,0	0/0:9,0:9:27.08:0,27,306	0/0:22,0:22:63.13:0,63,689	0/0:23,0:23:60.05:0,60,623	1/1:2,19:21:51.17:698,51,0	1/1:3,15:18:45.07:573,45,0	1/1:3,30:33:78.26:1066,78,0	1/1:4,31:35:93.29:1254,93,0	1/1:1,30:31:75.25:1024,75,0	0/0:28,0:28:78.22:0,78,884	0/0:14,0:14:36.10:0,36,405	0/0:39,0:39:99:0,111,1259	0/0:30,0:30:84.24:0,84,953	0/0:37,0:37:99:0,99,1099	0/0:61,0:61:99:0,171,1939	0/0:70,0:70:99:0,196,2190	1/1:2,32:34:90.30:1231,90,0	1/1:2,21:23:60.20:821,60,0	1/1:1,18:19:54.16:719,54,0	1/1:0,28:28:81.27:1108,81,0	1/1:2,36:38:93.31:1272,93,0	0/0:22,0:22:63.16:0,63,703	0/0:17,0:17:48.14:0,48,543	0/0:28,0:28:84.24:0,84,952	1/1:3,18:21:42.10:551,42,0	1/1:3,25:28:44.21:973,44,0	1/1:3,41:44:99:1475,108,0	1/1:5,1:6:3.01:41,3,0
chr10	110022892	.	G	GTGTGTGCA	10867.36	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-3.915;DP=978;FS=7.591;HRun=0;HaplotypeScore=261.7724;InbreedingCoeff=0.8418;MQ=70.19;MQ0=3;MQRankSum=-11.931;QD=55.16;ReadPosRankSum=-5.450;VQSLOD=2.1331;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,114,2838	0/0:10,0:10:27.03:0,27,595	0/1:24,0:21:12.93:13,0,216	0/0:24,0:20:0.30:0,0,125	1/1:15,16:33:50.61:1529,51,0	1/1:13,9:22:39.10:1382,39,0	1/1:40,10:51:79.70:2596,80,0	0/0:32,0:32:75.19:0,75,1749	1/1:14,18:33:75.22:2838,75,0	0/0:33,0:33:78.27:0,78,2020	0/0:22,0:22:60.21:0,60,1547	0/0:50,0:50:99:0,129,3276	0/0:35,0:35:81.09:0,81,1939	0/0:46,0:46:99:0,123,3095	0/0:64,0:64:99:0,162,3914	0/0:60,0:60:99:0,144,3352	0/0:34,0:34:90.17:0,90,2081	0/0:24,0:24:69.07:0,69,1628	0/0:24,0:24:45.01:0,45,843	0/0:39,0:39:87.26:0,87,2141	0/0:78,0:78:99:0,199,4828	0/0:37,0:37:96.23:0,96,2319	0/0:17,0:17:45.11:0,45,1093	0/0:35,0:35:93.22:0,93,2247	1/1:16,17:33:66.20:2510,66,0	0/0:23,0:23:60.19:0,60,1414	0/0:30,0:30:69.08:0,69,1526	0/0:8,0:8:24.08:0,24,610
chr10	110026012	.	A	AT	2104.08	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-9.315;DP=513;FS=21.696;HRun=8;HaplotypeScore=46.9140;InbreedingCoeff=0.8316;MQ=71.03;MQ0=0;MQRankSum=0.736;QD=21.92;ReadPosRankSum=-1.729;VQSLOD=1.7288;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,123,1121	0/0:2,0:2:3:0,3,27	0/1:13,0:11:12.43:12,0,113	0/0:10,0:9:14.95:0,15,129	1/1:1,19:20:54.09:606,54,0	1/1:0,17:17:51.15:588,51,0	1/1:2,20:20:48.14:554,48,0	0/0:25,0:25:44.95:0,45,397	1/1:3,8:11:21.06:242,21,0	0/0:13,0:13:33.01:0,33,302	0/0:11,0:11:33.02:0,33,302	0/0:18,0:18:45:0,45,407	0/0:18,0:18:48.01:0,48,436	0/0:15,0:15:17.91:0,18,284	0/0:24,0:24:41.44:0,41,543	0/0:19,0:19:54.03:0,54,494	0/0:34,0:34:87.05:0,87,796	0/0:16,0:16:48.01:0,48,433	0/0:22,0:21:56.47:0,56,509	0/0:15,0:15:41.97:0,42,373	0/0:25,0:25:56.99:0,57,515	0/0:2,0:2:6:0,6,55	0/0:11,0:11:33.02:0,33,302	0/0:14,0:14:32.99:0,33,297	1/1:5,8:13:24.07:277,24,0	0/0:25,0:25:66:0,66,594	0/0:32,0:32:78.01:0,78,710	0/0:20,0:20:60.03:0,60,549
chr10	110026166	.	C	CTT	1745.25	PASS	AB=0.771;AC=28;AF=0.500;AN=56;BaseQRankSum=5.418;DP=479;FS=1.062;HRun=14;HaplotypeScore=72.7006;InbreedingCoeff=0.4775;MQ=56.62;MQ0=9;MQRankSum=-2.899;QD=5.23;ReadPosRankSum=-2.606;VQSLOD=-0.7346;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:30:14.49:68,14,0	0/0:8,0:8:20.92:0,21,171	0/0:10,0:4:2.73:0,3,25	0/0:3,0:2:5.59:0,6,35	1/1:5,5:21:22.49:151,22,0	1/1:3,3:21:21:213,21,0	1/1:7,5:12:12.83:110,13,0	1/1:17,0:25:28.39:109,28,0	1/1:4,0:5:8.94:69,9,0	0/0:13,0:13:5.32:0,5,37	0/0:23,0:23:3.40:0,3,182	0/1:20,0:19:12.40:12,0,185	0/1:19,0:19:23.90:24,0,182	0/0:17,0:18:9.83:0,10,96	0/0:19,0:20:20.44:0,20,210	0/0:11,0:11:23.72:0,24,187	1/1:16,7:30:22:338,22,0	0/1:6,0:20:7.58:31,0,8	1/1:10,4:17:24.26:187,24,0	0/1:13,2:18:25.80:105,0,26	0/1:4,0:12:9.65:37,0,10	0/0:10,0:10:20.76:0,21,166	0/0:11,0:13:18.69:0,19,157	0/0:11,0:15:14.56:0,15,143	1/1:2,1:11:9.01:85,9,0	0/1:7,0:14:31.70:32,0,34	1/1:12,1:19:33.56:237,34,0	1/1:8,0:25:23.59:137,24,0
chr10	110027783	.	A	AAC	15309.62	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-18.509;DP=789;FS=7.096;HRun=0;HaplotypeScore=87.4775;InbreedingCoeff=0.9795;MQ=73.52;MQ0=1;MQRankSum=-0.229;QD=35.52;ReadPosRankSum=1.252;VQSLOD=7.1010;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,44:60:80.19:1832,80,0	0/0:10,0:10:27.08:0,27,335	0/0:34,0:29:30.05:0,30,344	0/0:35,0:33:75.12:0,75,867	1/1:7,20:27:23:884,23,0	1/1:4,25:29:32.03:1045,32,0	1/1:6,24:30:32.05:1044,32,0	1/1:6,24:32:78.21:1193,78,0	1/1:5,24:29:69.22:1104,69,0	0/0:19,0:19:45.13:0,45,548	0/0:19,0:19:57.16:0,57,692	0/0:36,0:36:72.22:0,72,892	0/0:31,0:31:81.23:0,81,990	0/0:28,0:28:72.23:0,72,893	0/0:39,0:39:99:0,108,1337	0/0:37,0:37:93.28:0,93,1140	1/1:4,37:40:99:1722,105,0	1/1:1,19:20:10.96:701,11,0	1/1:9,11:20:33.10:519,33,0	1/1:5,10:15:33.11:501,33,0	1/1:13,42:56:55.03:1919,55,0	0/0:19,0:19:48.15:0,48,594	0/0:16,0:16:48.13:0,48,572	0/0:35,0:35:87.26:0,87,1067	1/1:2,11:13:30.10:492,30,0	1/1:3,26:30:44.05:1208,44,0	1/1:2,25:27:32.05:1045,32,0	1/1:0,2:2:6.02:98,6,0
chr10	110028256	.	GT	G	11898.42	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=12.435;DP=648;FS=1.333;HRun=5;HaplotypeScore=66.7189;InbreedingCoeff=0.9968;MQ=81.31;MQ0=0;MQRankSum=-4.165;QD=30.75;ReadPosRankSum=2.292;VQSLOD=5.5600;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:99:1225,108,0	0/0:10,0:10:30.10:0,30,410	0/0:18,1:19:14.09:0,14,555	0/0:30,0:30:78.24:0,78,1033	1/1:2,28:29:66.18:748,66,0	1/1:1,28:29:78.22:885,78,0	1/1:0,19:19:54.15:612,54,0	1/1:2,26:28:78.21:876,78,0	1/1:1,16:17:42.12:476,42,0	0/0:26,0:26:75.24:0,75,1012	0/0:8,0:8:24.08:0,24,328	0/0:15,0:15:45.14:0,45,599	0/0:21,0:21:57.14:0,57,742	0/0:22,0:22:63.21:0,63,859	0/0:25,0:25:72.19:0,72,949	0/0:26,0:26:72.22:0,72,956	1/1:1,21:22:57.16:645,57,0	1/1:1,32:33:96.27:1088,96,0	1/1:2,24:26:72.17:795,72,0	1/1:0,15:15:45.04:493,45,0	1/1:1,41:42:99:1361,120,0	0/0:13,0:13:30.10:0,30,410	0/0:16,0:16:42.14:0,42,573	0/0:30,0:30:87.22:0,87,1121	1/1:1,20:21:57.16:644,57,0	1/1:1,25:26:75.17:827,75,0	1/1:1,29:30:78.22:883,78,0	1/1:0,10:10:30.09:340,30,0
chr10	110028532	.	A	AAAAAAAAAG	1595.80	PASS	AB=0.947;AC=16;AF=0.286;AN=56;BaseQRankSum=1.679;DP=520;FS=34.896;HRun=0;HaplotypeScore=157.7686;InbreedingCoeff=0.2060;MQ=39.94;MQ0=29;MQRankSum=-1.074;QD=6.41;ReadPosRankSum=-0.907;VQSLOD=1.1547;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:27:34.75:0,35,433	0/0:6,0:6:14.52:0,15,150	0/0:20,0:3:0.61:0,1,4	0/0:13,0:5:5.24:0,5,30	1/1:39,0:37:24.62:639,25,0	0/1:4,8:15:8.83:247,0,9	1/1:12,0:12:9.03:205,9,0	0/1:23,0:20:21.84:22,0,136	1/1:6,9:18:9.03:197,9,0	0/0:25,0:25:28.33:0,28,257	0/0:17,0:16:34.47:0,34,220	0/0:15,0:15:25.40:0,25,149	0/1:21,0:20:11.40:11,0,169	0/0:14,0:13:1.44:0,1,140	0/1:28,0:27:28.78:29,0,285	0/0:28,0:28:9.76:0,10,245	0/1:19,0:15:5.61:6,0,178	0/1:23,0:21:20.62:21,0,193	0/1:15,0:12:21.02:21,0,163	0/1:11,0:10:5.04:60,0,5	0/0:12,0:11:20.74:0,21,201	0/0:11,0:10:0.39:0,0,94	0/0:14,0:13:4.32:0,4,100	0/0:12,0:11:15.75:0,16,98	1/1:22,0:19:8.93:303,9,0	0/0:25,0:24:38.34:0,38,512	0/0:13,0:13:10.83:0,11,251	0/0:14,0:9:17.95:0,18,270
chr10	110028538	.	A	AAAGAAAAAG	1679.24	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-0.899;DP=552;FS=9.779;HRun=0;HaplotypeScore=151.7518;InbreedingCoeff=0.7576;MQ=42.19;MQ0=24;MQRankSum=-0.458;QD=11.83;ReadPosRankSum=1.293;VQSLOD=2.2410;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:34:25.05:0,25,505	0/0:10,0:10:23.98:0,24,309	0/0:24,0:4:8.28:0,8,60	0/1:18,0:8:9.81:10,0,81	1/1:9,24:45:1.26:730,1,0	1/1:13,1:15:6.83:281,7,0	1/1:1,6:17:9.03:253,9,0	0/0:23,0:21:41.37:0,41,321	1/1:19,1:19:11.99:220,12,0	0/0:24,0:24:65.45:0,65,730	0/0:16,0:15:45.01:0,45,545	0/0:12,0:12:32.98:0,33,369	0/0:21,0:20:44.48:0,44,574	0/0:13,0:13:29.19:0,29,401	0/0:28,0:28:75.44:0,75,837	0/0:31,0:31:86.60:0,87,891	0/0:19,0:18:23.90:0,24,158	0/0:22,0:21:36.05:0,36,248	0/0:14,0:11:21.93:0,22,248	0/0:12,0:11:11.45:0,11,94	0/0:10,0:10:21.43:0,21,256	0/0:10,0:10:25.75:0,26,281	0/0:14,0:13:31.83:0,32,342	0/0:13,0:11:20.78:0,21,242	1/1:4,11:24:8.93:338,9,0	0/0:26,0:25:55.43:0,55,736	0/0:17,0:17:43.36:0,43,411	0/0:14,0:10:20.94:0,21,303
chr10	110030912	.	A	AT	2186.90	PASS	AB=0.691;AC=16;AF=0.286;AN=56;BaseQRankSum=-7.930;DP=680;FS=0.390;HRun=14;HaplotypeScore=79.7762;InbreedingCoeff=0.3304;MQ=79.36;MQ0=3;MQRankSum=-0.843;QD=7.98;ReadPosRankSum=0.009;VQSLOD=2.7790;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,22:32:77.13:269,0,77	0/0:3,0:4:7.95:0,8,44	0/0:48,0:27:0.11:0,0,142	0/0:34,1:21:17.84:0,18,107	0/0:22,3:26:11.35:0,11,318	0/0:24,0:27:61.28:0,61,369	0/0:20,3:23:20.93:0,21,261	1/1:12,17:31:1.55:337,2,0	0/0:13,0:13:32.48:0,32,210	0/1:22,2:24:31.62:32,0,205	0/1:24,3:28:39.87:40,0,244	0/0:20,0:20:35.30:0,35,229	0/0:27,2:29:20.02:0,20,244	0/0:13,0:15:10.61:0,11,156	0/0:26,0:30:33.95:0,34,362	0/0:30,1:32:25.79:0,26,284	1/1:7,18:26:25.56:338,26,0	1/1:8,17:25:3.04:277,3,0	0/0:20,0:22:5.20:0,5,131	1/1:7,21:29:12.45:307,12,0	0/1:5,11:16:23.54:62,0,24	0/0:16,0:16:23.48:0,23,154	0/0:23,1:24:28.79:0,29,305	0/0:13,0:14:25.62:0,26,160	0/0:26,0:27:57.99:0,58,369	1/1:10,17:27:12.43:350,12,0	0/1:9,19:29:40.10:291,0,40	0/1:1,4:6:7.43:55,0,7
chr10	110031663	.	A	AG	2998.69	PASS	AB=0.762;AC=49;AF=0.942;AN=52;BaseQRankSum=-3.988;DP=213;FS=17.216;HRun=0;HaplotypeScore=57.4145;InbreedingCoeff=-0.0666;MQ=67.68;MQ0=0;MQRankSum=-2.109;QD=14.08;ReadPosRankSum=0.863;VQSLOD=3.3721;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,16:20:47.18:293,47,0	./.	0/1:9,2:9:59.22:59,0,98	0/1:16,4:10:1.53:180,0,2	1/1:0,2:2:5.69:44,6,0	1/1:3,5:8:22.76:151,23,0	1/1:2,12:14:30.79:240,31,0	1/1:0,7:7:20.44:128,20,0	0/1:2,2:4:11.37:62,0,11	1/1:0,11:11:32.70:256,33,0	1/1:2,0:2:3:25,3,0	1/1:1,3:4:9.99:73,10,0	1/1:1,5:6:13.54:63,14,0	1/1:1,2:3:5.36:22,5,0	1/1:2,7:9:17.59:104,18,0	1/1:0,3:3:8.39:39,8,0	1/1:1,9:10:24.91:137,25,0	1/1:0,8:8:17.75:152,18,0	1/1:2,4:6:9.27:98,9,0	1/1:0,1:4:2.68:11,3,0	1/1:0,7:7:20.29:177,20,0	1/1:1,9:10:22.20:113,22,0	1/1:0,4:4:7.42:62,7,0	1/1:5,8:13:11.78:102,12,0	1/1:0,4:4:11.51:104,12,0	1/1:0,12:12:35.57:284,36,0	1/1:2,6:8:18.41:120,18,0	./.
chr10	110032533	.	AGG	A	1505.05	PASS	AC=28;AF=0.519;AN=54;BaseQRankSum=9.962;DP=281;FS=18.507;HRun=4;HaplotypeScore=60.2109;InbreedingCoeff=0.8280;MQ=61.08;MQ0=4;MQRankSum=-8.944;QD=26.88;ReadPosRankSum=0.540;VQSLOD=1.4115;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,5:6:12.04:172,12,0	0/0:7,0:7:15.05:0,15,273	0/0:11,0:10:30.10:0,30,558	0/0:12,0:10:27.09:0,27,485	1/1:0,3:3:3.01:43,3,0	1/1:0,3:3:9.03:129,9,0	1/1:0,2:2:6.02:86,6,0	./.	1/1:0,3:3:3.01:43,3,0	0/0:20,0:19:51.17:0,51,926	0/0:10,0:10:30.09:0,30,519	0/0:31,0:31:93.32:0,93,1740	0/0:12,0:12:36.12:0,36,674	0/0:21,0:21:57.18:0,57,1036	0/0:34,0:34:99:0,102,1869	0/0:24,0:24:72.25:0,72,1349	1/1:0,4:3:9.03:129,9,0	1/1:0,7:6:18.06:258,18,0	1/1:0,1:1:3.01:43,3,0	1/1:2,1:2:3.01:43,3,0	1/1:5,2:7:9.03:121,9,0	0/0:6,0:6:15.04:0,15,281	0/0:15,0:14:36.12:0,36,674	0/0:19,0:19:54.19:0,54,1010	1/1:0,3:3:9.03:129,9,0	1/1:1,4:5:12.04:172,12,0	1/1:0,6:5:15.05:214,15,0	1/1:0,3:3:9.03:129,9,0
chr10	110032558	.	T	TTA	1493.35	PASS	AC=26;AF=0.500;AN=52;BaseQRankSum=9.344;DP=238;FS=5.740;HRun=0;HaplotypeScore=56.7593;InbreedingCoeff=0.8056;MQ=52.43;MQ0=7;MQRankSum=-9.137;QD=33.94;ReadPosRankSum=-6.041;VQSLOD=3.0951;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:12.04:150,12,0	0/0:7,0:6:15.05:0,15,245	0/0:5,0:4:12.04:0,12,177	0/0:5,0:3:6.02:0,6,96	1/1:0,3:3:3.01:37,3,0	1/1:0,2:3:9.03:135,9,0	1/1:1,2:2:6.02:76,6,0	./.	./.	0/0:19,0:18:54.16:0,54,855	0/0:10,0:10:21.07:0,21,342	0/0:29,0:29:87.30:0,87,1408	0/0:11,0:11:33.11:0,33,538	0/0:17,0:17:51.17:0,51,815	0/0:30,0:30:81.28:0,81,1317	0/0:23,0:23:69.24:0,69,1126	1/1:0,4:3:9.03:179,9,0	1/1:0,5:4:12.04:220,12,0	1/1:1,1:1:3.01:61,3,0	1/1:1,1:1:3.01:37,3,0	1/1:0,2:2:3.01:37,3,0	0/0:6,0:6:14.90:0,15,245	0/0:14,0:13:39.13:0,39,636	0/0:17,0:17:51.17:0,51,829	1/1:0,3:3:9.03:112,9,0	1/1:0,4:4:12.04:239,12,0	1/1:0,5:5:15.05:272,15,0	1/1:0,3:3:9.03:135,9,0
chr10	110036511	.	A	AT	1002.64	PASS	AB=0.813;AC=15;AF=0.268;AN=56;BaseQRankSum=-3.419;DP=543;FS=1.629;HRun=13;HaplotypeScore=66.3877;InbreedingCoeff=0.0048;MQ=72.43;MQ0=1;MQRankSum=1.290;QD=3.78;ReadPosRankSum=-1.228;VQSLOD=0.4153;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:60.35:0,60,401	0/0:5,0:5:8.87:0,9,61	0/1:23,0:17:0.92:1,0,91	0/0:13,0:12:7.12:0,7,75	1/1:7,9:25:0.28:227,0,0	0/1:8,16:25:69.59:267,0,70	1/1:4,17:23:33.60:281,34,0	0/0:21,0:21:24.31:0,24,181	0/1:5,10:15:2.56:121,0,3	0/0:20,0:19:47.56:0,48,329	0/0:11,0:14:22.76:0,23,150	0/0:12,0:12:23.75:0,24,164	0/1:16,4:21:27.90:28,0,257	0/1:11,3:14:20.01:20,0,170	0/0:13,0:16:35.78:0,36,223	0/0:20,0:22:7.58:0,8,238	0/0:29,0:31:60.98:0,61,410	0/0:25,0:25:44.43:0,44,302	0/1:20,2:24:16.10:16,0,174	0/0:15,0:15:38.59:0,39,267	0/0:19,3:23:18.72:0,19,266	0/1:14,2:19:11.24:11,0,188	0/1:19,1:21:2.62:3,0,244	0/0:19,0:21:33.48:0,33,217	0/1:2,12:16:17.45:116,0,17	0/1:15,3:19:42.81:43,0,171	0/1:17,2:20:21.26:21,0,156	0/0:6,0:7:16.90:0,17,109
chr10	110036870	.	CT	C	1887.92	PASS	AB=0.840;AC=30;AF=0.536;AN=56;BaseQRankSum=4.626;DP=566;FS=22.878;HRun=15;HaplotypeScore=82.7259;InbreedingCoeff=0.5151;MQ=75.21;MQ0=8;MQRankSum=-3.647;QD=6.09;ReadPosRankSum=2.739;VQSLOD=0.8451;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,8:19:22.50:140,22,0	0/0:6,0:6:5.22:0,5,34	0/0:42,0:20:15.06:0,15,117	0/0:44,0:23:8.44:0,8,91	1/1:12,15:28:43.27:275,43,0	1/1:5,9:17:13.77:184,14,0	1/1:4,10:14:26.58:173,27,0	1/1:11,6:20:23.45:126,23,0	1/1:2,10:13:13.66:83,14,0	0/0:24,0:25:29.21:0,29,352	0/1:12,1:13:11.27:11,0,126	0/1:17,3:20:23.12:23,0,164	0/1:15,1:17:1.43:1,0,100	0/0:20,0:20:27.39:0,27,230	0/0:32,2:34:11.92:0,12,390	0/0:25,2:27:31.66:0,32,386	1/1:11,9:22:33.34:202,33,0	0/1:10,3:13:25.03:68,0,25	0/1:14,7:22:14.20:95,0,14	1/1:7,11:19:10.19:176,10,0	1/1:6,1:6:2.93:19,3,0	0/0:18,0:18:21.78:0,22,175	0/0:20,0:22:19.16:0,19,210	0/0:15,1:16:4.83:0,5,143	0/1:10,3:15:10.45:54,0,10	1/1:16,12:27:41.79:271,42,0	1/1:5,2:9:12.82:66,13,0	1/1:3,9:12:9.69:120,10,0
chr10	110036893	.	C	CTTT	3857.68	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=1.533;DP=660;FS=27.797;HRun=13;HaplotypeScore=115.1677;InbreedingCoeff=0.8815;MQ=60.70;MQ0=16;MQRankSum=-4.205;QD=16.14;ReadPosRankSum=-1.970;VQSLOD=-0.1612;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,9:23:27.08:451,27,0	0/0:4,0:4:5.95:0,6,65	0/0:51,0:16:13.12:0,13,124	0/0:36,0:10:4.86:0,5,61	0/0:36,0:38:48.09:0,48,489	0/0:22,0:25:38.32:0,38,366	0/0:14,0:14:17.66:0,18,175	1/1:27,3:31:30.23:316,30,0	0/0:17,0:18:17.70:0,18,193	0/0:23,0:23:17.26:0,17,171	0/0:13,0:16:16.15:0,16,176	0/0:19,0:19:23.47:0,23,235	0/0:13,0:13:8.58:0,9,82	0/0:24,0:26:21.25:0,21,210	0/0:30,0:35:14.39:0,14,288	0/0:24,0:24:11.31:0,11,128	1/1:13,10:27:30.91:433,31,0	1/1:7,11:19:31.57:593,32,0	1/1:22,4:26:24.08:374,24,0	1/1:19,2:20:1.97:286,2,0	1/1:4,4:5:6.01:72,6,0	0/0:9,0:10:11.83:0,12,114	0/0:22,0:26:43.08:0,43,450	0/0:19,0:20:38.72:0,39,405	0/0:13,0:17:23.81:0,24,270	1/1:29,1:33:52.91:610,53,0	1/1:9,5:15:12.04:204,12,0	1/1:17,9:31:39.32:518,39,0
chr10	110042220	.	TTTC	T	546.32	PASS	AB=1.000;AC=12;AF=0.240;AN=50;BaseQRankSum=2.966;DP=680;FS=5.483;HRun=0;HaplotypeScore=93.6424;InbreedingCoeff=0.2243;MQ=60.11;MQ0=16;MQRankSum=1.099;QD=2.14;ReadPosRankSum=-0.455;VQSLOD=1.0659;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:11.99:0,12,101	0/0:10,0:10:9.03:0,9,167	./.	./.	0/1:33,0:35:1.43:1,0,187	0/0:19,0:24:6.01:0,6,76	0/0:34,0:31:2.94:0,3,18	./.	0/0:16,0:15:12.04:0,12,184	0/0:30,0:29:11.94:0,12,102	1/1:13,10:23:12.04:150,12,0	0/0:16,0:21:2.94:0,3,18	0/0:27,0:27:21.04:0,21,306	0/0:12,0:18:3.01:0,3,41	0/0:30,0:30:6.16:0,6,522	1/1:27,13:40:8.77:113,9,0	0/0:23,0:23:11.98:0,12,147	0/0:17,0:16:7.20:0,7,45	0/1:34,0:32:1.76:2,0,194	0/1:23,0:22:45.13:45,0,52	0/0:21,0:19:15.04:0,15,232	0/0:22,0:22:18.06:0,18,319	0/0:10,0:10:14.80:0,15,146	1/1:26,5:31:27.05:322,27,0	0/1:17,0:17:6.66:7,0,76	0/1:26,0:26:22.08:22,0,172	0/1:26,0:25:27.22:27,0,190	0/0:32,0:32:2.04:0,2,361
chr10	110042288	.	TCTC	T	2775.11	PASS	AB=0.978;AC=18;AF=0.333;AN=54;BaseQRankSum=5.870;DP=637;FS=3.728;HRun=0;HaplotypeScore=89.6671;InbreedingCoeff=0.3180;MQ=52.45;MQ0=32;MQRankSum=-3.949;QD=9.67;ReadPosRankSum=-2.217;VQSLOD=2.7489;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:10:18.15:144,18,0	0/0:10,0:10:30.01:0,30,383	0/0:18,0:3:6:0,6,55	./.	0/1:27,0:26:82.60:83,0,403	0/0:21,0:20:33.96:0,34,334	0/0:18,0:14:38.92:0,39,328	1/1:28,0:19:42.80:339,43,0	0/0:22,0:21:56.60:0,57,556	0/0:24,0:23:39.02:0,39,482	0/1:24,0:24:9.23:9,0,279	0/0:31,0:31:74.25:0,74,587	0/0:17,0:17:47.76:0,48,547	0/0:23,0:23:41.13:0,41,393	0/0:31,0:31:78.41:0,78,1075	0/0:48,0:48:72.03:0,72,859	0/1:15,0:14:55.31:135,0,55	1/1:11,0:10:20.31:137,20,0	0/1:15,1:11:26.75:160,0,27	1/1:4,25:27:54.72:415,55,0	0/1:23,0:19:61.24:240,0,61	0/0:23,0:22:51.80:0,52,676	0/0:17,0:15:17.27:0,17,230	0/1:26,0:24:41.16:41,0,199	0/0:21,5:26:23.43:0,23,481	1/1:23,1:24:12.42:532,12,0	0/1:20,2:21:30.52:351,0,31	0/1:28,1:28:99:376,0,140
chr10	110042590	.	TTTC	T	460.09	PASS	AB=0.890;AC=12;AF=0.222;AN=54;BaseQRankSum=7.819;DP=570;FS=1.633;HRun=0;HaplotypeScore=91.4559;InbreedingCoeff=0.2753;MQ=58.00;MQ0=30;MQRankSum=-3.378;QD=7.19;ReadPosRankSum=-4.187;VQSLOD=0.6594;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:8:37.95:38,0,51	0/0:7,0:7:21.07:0,21,494	0/0:35,0:11:26.68:0,27,445	0/0:41,0:9:20.59:0,21,391	0/0:23,0:23:63.22:0,63,1457	0/0:23,0:22:60.18:0,60,1264	0/0:29,0:26:72.21:0,72,1492	./.	0/0:33,0:33:96.31:0,96,2125	0/0:36,0:35:99:0,105,2406	0/0:25,0:25:72.25:0,72,1661	0/0:18,0:18:47.99:0,48,922	0/0:32,0:32:93.30:0,93,2026	0/0:29,0:29:87.26:0,87,1896	0/0:31,0:31:81.24:0,81,1755	0/0:31,0:31:89.64:0,90,1921	0/1:4,1:5:8.96:24,0,9	0/1:8,0:8:55.71:56,0,97	1/1:3,2:2:5.97:45,6,0	1/1:3,4:6:8.96:87,9,0	0/1:9,1:8:46.23:71,0,46	0/0:27,0:27:75.18:0,75,1521	0/0:17,0:16:45.15:0,45,1042	0/0:38,0:38:94.46:0,94,2041	0/0:21,0:19:51.18:0,51,1169	0/1:12,1:13:99:147,0,158	1/1:0,3:3:3.01:52,3,0	0/1:2,2:4:44.14:92,0,44
chr10	110042641	.	TTTC	T	2061.39	PASS	AB=0.668;AC=12;AF=0.214;AN=56;BaseQRankSum=10.517;DP=732;FS=17.827;HRun=0;HaplotypeScore=150.6922;InbreedingCoeff=0.5152;MQ=54.01;MQ0=25;MQRankSum=-9.504;QD=27.12;ReadPosRankSum=1.401;VQSLOD=2.3871;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,7:13:99:433,0,118	0/0:6,0:6:18.05:0,18,356	0/0:88,0:21:46.56:0,47,804	0/0:114,0:28:62.76:0,63,1078	0/0:15,0:15:45.14:0,45,977	0/0:24,0:23:63.20:0,63,1417	0/0:35,0:35:93.30:0,93,2034	0/0:14,0:14:39.13:0,39,922	0/0:22,0:22:63.16:0,63,1435	0/0:42,0:41:99:0,123,2684	0/0:26,0:26:72.21:0,72,1476	0/0:18,0:18:50.99:0,51,1074	0/0:38,0:38:99:0,103,2188	0/0:28,0:28:81.26:0,81,1822	0/0:39,0:39:96.31:0,96,2102	0/0:38,0:38:99:0,108,2267	1/1:3,4:6:6.02:106,6,0	0/1:6,4:10:99:181,0,191	0/0:5,1:2:3.01:0,3,71	1/1:1,6:7:18.06:315,18,0	0/1:5,4:7:85.62:86,0,213	0/0:28,0:28:81.24:0,81,1815	0/0:15,0:15:45.15:0,45,964	0/0:42,0:42:98.63:0,99,2416	0/0:17,0:17:42.12:0,42,830	0/1:6,10:15:99:467,0,287	1/1:0,9:9:24.08:390,24,0	1/1:1,4:5:15.05:254,15,0
chr10	110042687	.	TG	T	20948.76	PASS	AB=0.899;AC=54;AF=0.964;AN=56;BaseQRankSum=-7.841;DP=641;FS=0.000;HRun=1;HaplotypeScore=96.1034;InbreedingCoeff=-0.0381;MQ=68.45;MQ0=6;MQRankSum=-3.061;QD=32.68;ReadPosRankSum=5.046;VQSLOD=4.4331;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:29:47.01:993,47,0	1/1:0,8:8:21.07:294,21,0	0/1:28,3:13:74.18:74,0,266	0/1:47,7:26:75.82:76,0,414	1/1:0,16:16:45.15:629,45,0	1/1:0,24:24:66.22:923,66,0	1/1:0,24:24:60.20:839,60,0	1/1:0,9:8:15.05:209,15,0	1/1:0,24:24:69.23:963,69,0	1/1:0,33:33:99:1362,99,0	1/1:0,16:16:39.13:545,39,0	1/1:0,13:13:33.11:461,33,0	1/1:0,33:33:90.30:1259,90,0	1/1:0,35:35:87.29:1217,87,0	1/1:0,36:36:81.27:1133,81,0	1/1:0,36:36:99:1416,102,0	1/1:4,14:18:45.11:596,45,0	1/1:4,7:11:21.15:396,21,0	1/1:0,9:9:27.09:378,27,0	1/1:0,17:17:51.17:709,51,0	1/1:0,10:9:21.07:288,21,0	1/1:0,25:25:72.24:1001,72,0	1/1:0,15:15:45.15:629,45,0	1/1:4,32:36:99:1458,105,0	1/1:0,19:19:51.17:713,51,0	1/1:0,23:22:66.22:918,66,0	1/1:0,20:20:57.19:796,57,0	1/1:0,16:16:48.16:671,48,0
chr10	110046333	.	A	ACCC	3995.74	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=-0.071;DP=342;FS=3.587;HRun=4;HaplotypeScore=52.8517;InbreedingCoeff=0.8574;MQ=46.64;MQ0=38;MQRankSum=-2.665;QD=31.22;ReadPosRankSum=0.509;VQSLOD=0.8659;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,3:15:27.07:378,27,0	./.	0/0:49,0:9:1.89:0,2,35	0/0:29,1:5:2.25:0,2,42	0/0:13,0:13:30.01:0,30,387	0/0:7,0:5:6.02:0,6,91	0/0:15,0:14:36.08:0,36,473	1/1:7,7:14:30.10:532,30,0	0/0:3,0:3:6.02:0,6,79	0/0:8,0:6:15.05:0,15,218	0/0:14,0:13:30.10:0,30,440	0/0:4,0:3:9.03:0,9,136	0/0:4,0:4:9.03:0,9,135	0/0:6,0:6:15.05:0,15,226	0/0:7,0:7:15.05:0,15,223	0/0:11,0:10:27.08:0,27,402	1/1:14,4:17:36.12:627,36,0	1/1:12,4:14:24.08:443,24,0	1/1:12,4:13:30.99:508,31,0	1/1:3,8:11:27.09:476,27,0	1/1:8,1:7:9.03:162,9,0	0/0:7,0:5:12.04:0,12,181	0/0:8,0:7:15.05:0,15,215	0/0:14,0:14:17.86:0,18,224	0/0:13,0:13:20.98:0,21,283	1/1:8,3:10:24.08:426,24,0	1/1:8,2:8:21.06:319,21,0	1/1:5,1:4:9.01:125,9,0
chr10	110046839	.	CTGAA	C	6202.86	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=4.736;DP=632;FS=1.797;HRun=0;HaplotypeScore=115.3182;InbreedingCoeff=0.9713;MQ=76.94;MQ0=1;MQRankSum=-1.839;QD=25.53;ReadPosRankSum=-0.301;VQSLOD=4.7313;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,20:26:45.15:716,45,0	0/0:6,0:6:12.04:0,12,287	0/0:19,0:18:9.03:0,9,136	0/0:22,0:21:16.29:0,16,268	0/0:15,0:30:54.17:0,54,967	0/0:8,0:24:45.15:0,45,788	0/0:6,0:15:18.06:0,18,315	1/1:25,12:37:36.12:573,36,0	0/0:3,0:17:42.14:0,42,771	0/0:26,0:26:45.15:0,45,1078	0/0:23,0:23:42.13:0,42,929	0/0:21,0:21:45.15:0,45,1062	0/0:39,0:39:84.29:0,84,1977	0/0:19,0:19:30.10:0,30,707	0/0:31,1:32:12.44:0,12,1308	0/0:20,0:20:36.12:0,36,832	1/1:5,22:26:60.20:955,60,0	1/1:6,14:20:42.14:669,42,0	1/1:12,5:17:15.05:239,15,0	1/1:6,12:18:30.10:478,30,0	1/1:5,12:17:36.12:573,36,0	0/0:8,0:8:18.06:0,18,431	0/0:17,0:17:36.12:0,36,862	0/0:17,0:17:45.13:0,45,1001	0/0:11,0:32:45.15:0,45,803	1/1:10,20:30:60.20:950,60,0	1/1:22,20:42:53.68:859,54,0	1/1:3,4:8:12.04:191,12,0
chr10	110048383	.	GTTTT	G	4481.04	PASS	AB=0.636;AC=19;AF=0.339;AN=56;BaseQRankSum=6.988;DP=596;FS=8.124;HRun=16;HaplotypeScore=104.2270;InbreedingCoeff=0.8781;MQ=78.64;MQ0=4;MQRankSum=-4.885;QD=19.65;ReadPosRankSum=5.326;VQSLOD=3.1147;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,30:44:1.03:765,1,0	0/0:6,0:8:21.05:0,21,324	0/0:36,0:28:38.45:0,38,415	0/0:21,0:13:15.51:0,16,223	0/0:19,0:20:48.10:0,48,837	0/0:12,0:17:33.10:0,33,618	0/0:10,0:12:27.09:0,27,484	1/1:12,12:25:32.62:412,33,0	0/0:13,0:15:36:0,36,627	0/0:24,0:29:66.17:0,66,1090	0/0:11,0:12:21.04:0,21,272	0/0:17,0:18:39.12:0,39,687	0/0:18,0:18:41.47:0,41,779	0/0:21,0:23:60.20:0,60,1106	0/0:16,0:20:39.13:0,39,779	0/0:30,0:33:78.25:0,78,1445	1/1:8,12:21:28.07:358,28,0	1/1:4,19:23:44.94:592,45,0	1/1:4,9:13:26.70:352,27,0	1/1:4,7:12:23.77:263,24,0	0/1:9,12:21:12.06:141,0,12	0/0:15,0:19:48.13:0,48,785	0/0:24,0:24:63.19:0,63,1149	0/0:13,0:15:42.14:0,42,822	0/0:20,0:23:54.06:0,54,918	1/1:12,25:38:74.79:921,75,0	1/1:6,19:25:17.56:521,18,0	1/1:0,6:6:12:158,12,0
chr10	110048609	.	TGCCTCATACCTTTACGTCATGA	T	16824.35	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.610;DP=683;FS=3.514;HRun=0;HaplotypeScore=380.1800;InbreedingCoeff=0.9673;MQ=71.20;MQ0=0;MQRankSum=-12.464;QD=87.17;ReadPosRankSum=2.716;VQSLOD=3.8320;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,20:30:42.14:2409,42,0	0/0:9,0:9:27.08:0,27,2338	0/0:28,0:27:69.03:0,69,5355	0/0:16,0:15:40.31:0,40,2382	0/0:25,0:25:69.24:0,69,6307	0/0:20,0:20:57.20:0,57,5131	0/0:30,0:30:90.28:0,90,7952	1/1:4,8:12:24.05:754,24,0	0/0:31,0:31:93.32:0,93,9454	0/0:35,0:35:99:0,102,9207	0/0:12,0:12:36.12:0,36,3403	0/0:34,0:34:96.33:0,96,9298	0/0:26,0:26:78.27:0,78,7432	0/0:48,0:48:99:0,141,12979	0/0:44,0:44:99:0,132,12457	0/0:31,0:31:90.31:0,90,8660	1/1:5,9:14:21.07:1279,21,0	1/1:2,12:14:24.08:1462,24,0	1/1:6,5:11:15.03:623,15,0	1/1:4,20:24:51.18:2978,51,0	1/1:17,13:30:14.36:902,14,0	0/0:24,0:24:66.23:0,66,6189	0/0:17,0:17:51.18:0,51,4824	0/0:38,0:37:99:0,111,10084	0/0:22,0:22:66.23:0,66,6466	1/1:8,18:26:51.17:2764,51,0	1/1:7,22:29:57.20:3471,57,0	1/1:2,1:3:3.01:183,3,0
chr10	110050984	.	TC	T	4820.35	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=7.114;DP=543;FS=2.019;HRun=9;HaplotypeScore=65.6958;InbreedingCoeff=0.9984;MQ=79.68;MQ0=1;MQRankSum=-1.832;QD=21.71;ReadPosRankSum=1.704;VQSLOD=5.7329;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:81.04:741,81,0	0/0:13,0:13:33.08:0,33,364	0/0:33,0:30:42.39:0,42,481	0/0:28,0:25:35.63:0,36,370	0/0:10,0:10:24.07:0,24,277	0/0:14,0:14:28.82:0,29,374	0/0:14,0:14:33.09:0,33,372	1/1:11,20:31:63:571,63,0	0/0:12,0:12:30.09:0,30,346	0/0:21,0:21:54.15:0,54,614	0/0:25,0:25:63.19:0,63,726	0/0:17,0:17:51.13:0,51,566	0/0:15,0:15:39.11:0,39,448	0/0:23,0:23:63.18:0,63,718	0/0:25,0:25:69.19:0,69,786	0/0:24,0:24:63.18:0,63,719	1/1:5,28:33:46.42:679,46,0	1/1:3,20:23:56.98:513,57,0	1/1:1,7:8:24:211,24,0	1/1:2,11:13:32.98:294,33,0	1/1:0,22:22:63.03:576,63,0	0/0:9,0:10:29.92:0,30,324	0/0:12,0:12:24.07:0,24,277	0/0:12,0:12:33.10:0,33,381	0/0:12,0:12:30.01:0,30,319	1/1:6,17:23:57.02:520,57,0	1/1:2,20:22:51.03:466,51,0	1/1:3,11:14:27.01:247,27,0
chr10	110059067	.	G	GAGGT	20405.51	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-16.771;DP=780;FS=0.583;HRun=0;HaplotypeScore=117.5705;InbreedingCoeff=0.9993;MQ=83.20;MQ0=0;MQRankSum=-6.383;QD=61.65;ReadPosRankSum=1.901;VQSLOD=6.5636;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,40:47:99:2712,105,0	0/0:10,0:10:30.08:0,30,498	0/0:30,0:30:78.25:0,78,1375	0/0:24,0:24:54.77:0,55,1144	0/0:25,0:24:69.24:0,69,1288	0/0:18,0:18:51.17:0,51,952	0/0:36,0:36:99:0,102,1882	1/1:10,26:37:96.30:2347,96,0	0/0:18,0:18:54.16:0,54,975	0/0:21,0:21:57.20:0,57,1055	0/0:13,0:13:36.12:0,36,672	0/0:37,0:37:99:0,102,1881	0/0:24,0:24:63.22:0,63,1175	0/0:31,0:31:90.31:0,90,1679	0/0:43,0:43:99:0,126,2341	0/0:37,0:37:99:0,108,1988	1/1:9,27:36:60.36:1653,60,0	1/1:2,24:26:69.24:1839,69,0	1/1:7,17:25:69.19:1683,69,0	1/1:3,16:20:48.16:1279,48,0	1/1:5,53:59:99:3519,132,0	0/0:25,0:25:72.25:0,72,1344	0/0:16,0:16:48.16:0,48,896	0/0:23,0:23:63.22:0,63,1176	0/0:18,0:18:54.17:0,54,977	1/1:4,31:38:99:2656,105,0	1/1:4,29:33:81.28:2158,81,0	1/1:3,7:10:21.07:560,21,0
chr10	110060976	.	C	CT	6421.10	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.490;DP=257;FS=13.817;HRun=2;HaplotypeScore=67.2163;InbreedingCoeff=0.8627;MQ=75.71;MQ0=0;MQRankSum=-7.325;QD=27.44;ReadPosRankSum=1.618;VQSLOD=3.2974;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,4:8:17.88:147,18,0	1/1:1,4:5:13.07:88,13,0	0/0:11,0:11:29.73:0,30,308	0/0:12,0:12:33.09:0,33,378	1/1:1,7:8:21.06:290,21,0	1/1:2,7:9:23.89:216,24,0	1/1:1,6:7:20.86:180,21,0	1/1:6,13:19:56.96:561,57,0	1/1:3,4:7:20.85:188,21,0	1/1:3,9:12:34.83:329,35,0	1/1:2,2:4:11.97:133,12,0	1/1:4,13:17:44.55:358,45,0	1/1:1,2:3:8.89:60,9,0	1/1:4,8:12:32.75:320,33,0	1/1:1,12:13:32.87:363,33,0	1/1:4,10:14:38.84:380,39,0	1/1:3,2:5:8.99:109,9,0	1/1:2,2:4:9.02:102,9,0	1/1:2,7:9:27.04:273,27,0	1/1:3,5:8:24.02:306,24,0	1/1:4,10:14:33.03:427,33,0	1/1:4,3:7:20.94:273,21,0	1/1:1,6:7:21:284,21,0	1/1:1,8:9:17.23:156,17,0	1/1:2,4:6:15.82:147,16,0	1/1:1,8:9:26.96:239,27,0	1/1:3,4:7:18.02:203,18,0	1/1:5,6:11:29.95:289,30,0
chr10	110060977	.	TC	T	2996.96	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.758;DP=232;FS=16.334;HRun=1;HaplotypeScore=70.2459;InbreedingCoeff=0.7816;MQ=78.89;MQ0=0;MQRankSum=-6.486;QD=14.34;ReadPosRankSum=1.825;VQSLOD=1.7803;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:13.41:58,13,0	1/1:4,0:4:9.08:34,9,0	0/0:11,0:11:20.94:0,21,266	0/0:11,1:12:33:0,33,350	1/1:8,0:8:20.95:171,21,0	1/1:7,2:9:22.11:109,22,0	1/1:6,0:6:16.06:76,16,0	1/1:13,5:18:52.10:309,52,0	1/1:5,2:7:19.10:90,19,0	1/1:9,1:10:22.38:141,22,0	1/1:4,0:4:11.37:88,11,0	1/1:14,1:15:33.34:134,33,0	1/1:3,0:3:7.96:40,8,0	1/1:9,1:10:26.75:153,27,0	1/1:12,0:12:27.53:157,28,0	1/1:13,0:13:33.07:182,33,0	1/1:4,0:4:7.59:28,8,0	1/1:3,1:4:8.89:59,9,0	1/1:7,0:7:20.65:134,21,0	1/1:7,0:7:20.26:149,20,0	1/1:13,1:14:32.06:233,32,0	1/1:5,1:6:16.78:145,17,0	1/1:6,0:6:17.64:133,18,0	1/1:8,1:9:14.46:71,14,0	1/1:5,0:5:6.62:65,7,0	1/1:8,1:9:25.95:141,26,0	1/1:6,0:6:17.72:126,18,0	1/1:7,0:7:19.70:103,20,0
chr10	110060979	.	TC	T	1564.36	PASS	AB=0.750;AC=52;AF=0.929;AN=56;BaseQRankSum=3.359;DP=220;FS=6.145;HRun=4;HaplotypeScore=73.4107;InbreedingCoeff=0.3359;MQ=76.27;MQ0=0;MQRankSum=-5.248;QD=7.48;ReadPosRankSum=3.849;VQSLOD=0.2814;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,4:6:13.64:59,14,0	1/1:0,4:4:4.66:25,5,0	0/1:10,0:10:13.70:14,0,203	0/0:11,0:11:30.06:0,30,350	0/1:0,7:7:0:0,0,0	1/1:2,7:9:16.49:73,16,0	1/1:0,6:6:13.43:56,13,0	1/1:4,13:17:37.35:215,37,0	1/1:3,4:7:13.76:55,14,0	1/1:1,9:10:20.81:125,21,0	1/1:2,2:4:8.49:61,8,0	1/1:2,13:15:31.47:125,31,0	1/1:0,2:2:5.09:19,5,0	1/1:2,8:10:18.82:90,19,0	1/1:2,10:12:13.12:53,13,0	1/1:4,8:12:18.93:80,19,0	1/1:2,2:4:2.42:11,2,0	1/1:2,2:4:5.93:40,6,0	1/1:0,7:7:20.67:135,21,0	1/1:2,4:6:5.68:41,6,0	1/1:3,10:13:8.34:44,8,0	1/1:2,3:5:5.04:37,5,0	1/1:0,6:6:2.50:9,2,0	1/1:1,8:9:9.08:31,9,0	1/1:0,4:4:3.92:28,4,0	1/1:1,8:9:23.08:123,23,0	1/1:1,4:5:8.70:50,9,0	1/1:0,6:6:16.97:83,17,0
chr10	110062454	.	C	CT	4208.25	PASS	AB=0.857;AC=21;AF=0.375;AN=56;BaseQRankSum=-5.527;DP=602;FS=2.124;HRun=11;HaplotypeScore=86.8394;InbreedingCoeff=0.7717;MQ=63.62;MQ0=1;MQRankSum=-2.715;QD=14.98;ReadPosRankSum=-1.099;VQSLOD=3.8987;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:8,24:31:52.49:422,0,52	0/0:8,0:8:8.93:0,9,70	0/1:23,0:17:43.43:43,0,58	0/1:14,0:12:4.67:5,0,79	0/0:22,0:22:41.15:0,41,307	0/0:17,1:19:16.40:0,16,299	0/0:13,0:13:32.86:0,33,253	1/1:12,22:34:23.08:549,23,0	0/0:13,0:13:29.86:0,30,232	0/0:30,0:30:71.70:0,72,556	0/0:17,0:18:49.83:0,50,373	0/0:26,0:28:58.35:0,58,434	0/0:20,0:20:50.79:0,51,394	0/0:17,0:17:38.82:0,39,302	0/0:27,0:27:61.72:0,62,468	0/0:35,0:35:47.28:0,47,548	1/1:10,19:29:34.79:514,35,0	1/1:1,11:12:18.04:183,18,0	1/1:7,20:26:22.62:542,23,0	1/1:2,21:23:33.84:510,34,0	1/1:5,8:13:12.02:121,12,0	0/0:14,0:14:26.87:0,27,209	0/0:17,0:17:35.81:0,36,279	0/0:14,0:14:23.87:0,24,186	0/0:26,0:26:73.75:0,74,563	1/1:6,24:29:27.03:627,27,0	1/1:10,17:27:22.06:382,22,0	1/1:4,9:14:32.87:310,33,0
chr10	110063023	.	C	CGT	5844.01	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.127;DP=774;FS=3.187;HRun=0;HaplotypeScore=138.9496;InbreedingCoeff=0.9933;MQ=60.51;MQ0=14;MQRankSum=-4.602;QD=21.64;ReadPosRankSum=1.519;VQSLOD=5.4560;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,17:35:39.56:591,40,0	0/0:13,0:13:36.12:0,36,478	0/0:36,0:16:38.52:0,39,479	0/0:54,0:30:57.15:0,57,718	0/0:19,0:19:39.13:0,39,514	0/0:23,0:23:66.13:0,66,844	0/0:39,0:40:93.20:0,93,1184	1/1:5,16:19:48.60:718,49,0	0/0:19,0:19:45.15:0,45,597	0/0:23,0:23:63.17:0,63,795	0/0:19,0:19:37.11:0,37,622	0/0:40,0:40:99:0,102,1323	0/0:29,0:29:66.22:0,66,874	0/0:33,0:33:61.32:0,61,1034	0/0:40,0:40:99:0,108,1401	0/0:25,0:25:68.99:0,69,853	1/1:8,32:40:23.40:914,23,0	1/1:12,10:21:36.56:555,37,0	1/1:5,10:15:28.52:290,29,0	1/1:4,13:17:21.07:348,21,0	1/1:14,43:55:51.16:814,51,0	0/0:16,0:16:42.14:0,42,558	0/0:22,0:21:54.15:0,54,673	0/0:29,0:29:71.90:0,72,916	0/0:24,0:24:51.14:0,51,646	1/1:9,17:24:56.90:833,57,0	1/1:8,12:20:14.29:595,14,0	1/1:9,4:11:14.45:185,14,0
chr10	110063053	.	C	CGT	1169.64	PASS	AB=0.923;AC=14;AF=0.259;AN=54;BaseQRankSum=2.350;DP=709;FS=6.229;HRun=0;HaplotypeScore=136.3284;InbreedingCoeff=0.2179;MQ=51.87;MQ0=21;MQRankSum=-0.713;QD=3.51;ReadPosRankSum=-3.603;VQSLOD=1.4538;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,17:34:6.80:259,7,0	0/0:12,0:12:14.81:0,15,133	./.	0/1:24,0:8:0:0,0,0	0/0:14,0:14:14.87:0,15,148	0/0:14,0:14:18.02:0,18,182	0/0:37,0:39:59.10:0,59,554	1/1:27,0:24:3.30:31,3,0	0/0:17,0:18:35.89:0,36,354	0/0:26,0:28:35.88:0,36,373	0/0:15,0:15:18.03:0,18,186	0/0:30,0:32:31.50:0,32,383	0/0:22,0:23:8.83:0,9,261	0/1:31,0:32:2.50:3,0,354	0/0:34,0:37:47.93:0,48,498	0/0:17,0:19:32.48:0,32,299	0/1:37,3:37:12.08:166,0,12	1/1:12,9:20:9.03:136,9,0	0/1:12,1:13:18.51:106,0,19	0/1:14,2:16:27.52:39,0,28	0/1:65,11:72:76.01:333,0,76	0/0:19,0:19:23.97:0,24,246	0/0:20,0:20:24.06:0,24,262	0/0:35,0:40:62.10:0,62,561	0/0:21,0:22:29.82:0,30,279	0/1:24,1:23:50.14:89,0,50	0/1:14,5:19:82.13:158,0,82	0/0:6,0:4:5.60:0,6,43
chr10	110063985	.	TA	T	541.66	PASS	AB=0.968;AC=17;AF=0.304;AN=56;BaseQRankSum=7.150;DP=479;FS=2.937;HRun=13;HaplotypeScore=84.4222;InbreedingCoeff=0.3714;MQ=72.35;MQ0=6;MQRankSum=-5.130;QD=2.91;ReadPosRankSum=-1.311;VQSLOD=0.1939;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:10.11:110,10,0	0/0:4,0:4:12.02:0,12,116	0/0:45,1:18:6.27:0,6,115	0/0:39,0:20:24.68:0,25,189	0/0:31,0:31:70.66:0,71,674	0/0:21,1:22:41.19:0,41,557	0/1:6,1:7:5.33:5,0,104	0/1:26,0:24:9.91:53,0,10	0/0:9,0:9:2.26:0,2,121	0/0:21,1:22:23.15:0,23,400	0/0:21,0:22:14.33:0,14,358	0/0:12,1:13:14.15:0,14,296	0/0:12,0:12:27.92:0,28,259	0/0:8,0:8:20.98:0,21,189	0/0:10,0:10:8.83:0,9,236	0/0:16,0:16:32.25:0,32,370	0/1:13,0:13:10.98:80,0,11	1/1:17,0:18:10.54:93,11,0	1/1:13,0:13:6.56:35,7,0	0/1:14,0:14:29.73:30,0,37	1/1:5,0:5:4.27:26,4,0	0/0:3,0:3:9.01:0,9,87	0/0:14,0:14:30.05:0,30,292	0/1:8,1:9:0.87:1,0,154	0/0:21,0:21:61.68:0,62,565	0/1:14,0:13:4.41:87,0,4	1/1:24,0:24:23.48:122,23,0	0/1:21,0:21:43.63:71,0,44
chr10	110063997	.	AAG	A	2736.06	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=5.293;DP=468;FS=4.799;HRun=0;HaplotypeScore=87.9543;InbreedingCoeff=0.9561;MQ=69.54;MQ0=6;MQRankSum=-3.012;QD=16.68;ReadPosRankSum=-4.013;VQSLOD=2.3628;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:22,2:24:61.02:468,61,0	0/0:5,0:4:12.04:0,12,182	0/0:48,1:17:28.08:0,28,235	0/0:36,0:17:24.37:0,24,270	0/0:26,0:26:70:0,70,1008	0/0:23,0:23:59.89:0,60,853	0/0:8,0:8:23.61:0,24,257	1/1:26,2:26:48.51:398,49,0	0/0:6,0:6:14.85:0,15,157	0/0:24,0:24:61.34:0,61,695	0/0:20,0:20:38.40:0,38,625	0/0:12,0:12:35.45:0,35,466	0/0:12,0:12:36.01:0,36,459	0/0:7,0:7:21.01:0,21,277	0/0:14,0:14:39.39:0,39,497	0/0:17,0:17:46.33:0,46,619	1/1:11,2:13:24.78:247,25,0	1/1:18,0:18:45.38:305,45,0	1/1:11,1:12:35.87:344,36,0	1/1:8,0:8:15.10:112,15,0	1/1:3,0:3:8.88:69,9,0	0/0:3,0:3:9.03:0,9,136	0/0:12,0:12:36.09:0,36,492	0/0:8,0:8:23.74:0,24,305	0/0:22,0:22:36.06:0,36,867	1/1:17,2:18:6.78:324,7,0	1/1:17,2:19:36.01:290,36,0	1/1:17,3:20:17.89:394,18,0
chr10	110063998	.	AG	A	4110.47	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=3.496;DP=462;FS=6.860;HRun=1;HaplotypeScore=75.3452;InbreedingCoeff=0.9648;MQ=69.89;MQ0=6;MQRankSum=-6.405;QD=25.53;ReadPosRankSum=-4.393;VQSLOD=1.9218;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,6:22:64.64:627,65,0	0/0:5,0:4:12.04:0,12,139	0/0:47,1:17:17:0,17,190	0/0:35,0:17:20.58:0,21,189	0/0:26,0:26:65.09:0,65,759	0/0:22,0:22:58.30:0,58,643	0/0:8,0:8:18.48:0,18,171	1/1:21,7:26:54:528,54,0	0/0:5,0:5:12.80:0,13,107	0/0:23,1:24:43.26:0,43,544	0/0:20,0:20:48.71:0,49,460	0/0:12,0:12:20.82:0,21,313	0/0:12,0:12:35.97:0,36,353	0/0:7,0:7:20.94:0,21,207	0/0:14,0:14:18.92:0,19,374	0/0:16,1:17:13.66:0,14,412	1/1:7,6:13:37.56:383,38,0	1/1:12,5:17:50.92:502,51,0	1/1:7,5:12:35.96:338,36,0	1/1:5,3:8:18.10:160,18,0	1/1:2,1:3:9.01:106,9,0	0/0:4,0:4:12.03:0,12,128	0/0:12,0:12:36.05:0,36,378	0/0:8,0:8:14.43:0,14,215	0/0:22,0:22:32.71:0,33,631	1/1:14,5:18:19.77:525,20,0	1/1:6,13:19:38.95:414,39,0	1/1:13,7:20:54.16:528,54,0
chr10	110064039	.	C	CTT	3597.66	PASS	AB=0.904;AC=20;AF=0.357;AN=56;BaseQRankSum=-1.792;DP=404;FS=3.503;HRun=12;HaplotypeScore=102.5796;InbreedingCoeff=0.5081;MQ=75.17;MQ0=1;MQRankSum=-4.094;QD=17.13;ReadPosRankSum=-2.736;VQSLOD=2.4033;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,7:24:57.03:622,57,0	0/1:5,0:5:12.19:12,0,71	0/1:20,0:14:38.65:39,0,88	0/0:17,0:13:5.10:0,5,86	0/0:20,0:20:32.45:0,32,304	0/0:14,0:14:29.95:0,30,273	0/0:7,0:7:11.96:0,12,111	1/1:18,5:23:55.24:572,55,0	0/0:5,0:5:8.95:0,9,82	0/0:21,0:21:41.87:0,42,388	0/1:21,1:21:11.97:12,0,219	0/0:11,0:12:24.84:0,25,208	0/0:12,0:13:23.61:0,24,202	0/0:8,0:8:5.71:0,6,96	0/0:12,0:13:23.56:0,24,205	0/0:18,0:20:29.47:0,29,301	1/1:8,4:15:38.03:396,38,0	0/1:9,2:12:4.63:150,0,5	0/1:15,4:16:3.67:193,0,4	1/1:4,4:8:21.05:256,21,0	1/1:2,4:6:18.03:218,18,0	0/0:2,0:2:6.01:0,6,56	0/0:9,0:9:17.93:0,18,166	0/0:13,0:14:24.33:0,24,222	0/0:19,0:19:23.65:0,24,259	1/1:14,11:25:34.95:603,35,0	0/1:13,3:16:50.20:205,0,50	1/1:7,6:14:4.79:319,5,0
chr10	110064056	.	TC	T	11081.39	PASS	AB=0.904;AC=54;AF=0.964;AN=56;BaseQRankSum=-5.806;DP=391;FS=2.425;HRun=3;HaplotypeScore=63.2866;InbreedingCoeff=-0.0352;MQ=71.62;MQ0=2;MQRankSum=-2.553;QD=28.34;ReadPosRankSum=2.393;VQSLOD=4.1858;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,17:22:48.09:561,48,0	1/1:0,4:4:12.04:149,12,0	0/1:23,2:17:46.87:47,0,193	0/1:13,2:9:22.23:22,0,67	1/1:0,24:24:60.19:744,60,0	1/1:0,12:12:36.11:446,36,0	1/1:0,6:6:18.06:223,18,0	1/1:6,18:23:51.16:632,51,0	1/1:0,4:4:12.04:149,12,0	1/1:2,21:22:60.18:729,60,0	1/1:0,16:15:39.12:483,39,0	1/1:0,12:12:36.11:446,36,0	1/1:0,15:15:39.12:482,39,0	1/1:2,8:10:30.09:371,30,0	1/1:0,20:20:51.16:632,51,0	1/1:1,16:17:45.14:557,45,0	1/1:4,9:13:29.15:395,29,0	1/1:2,11:13:36.07:422,36,0	1/1:1,13:9:24.08:297,24,0	1/1:0,7:7:21.07:260,21,0	1/1:0,14:14:36.11:445,36,0	1/1:0,5:5:15.05:186,15,0	1/1:0,9:9:27.08:334,27,0	1/1:0,13:13:36.11:446,36,0	1/1:4,9:13:30.09:372,30,0	1/1:3,19:22:51.16:631,51,0	1/1:3,6:9:21.05:248,21,0	1/1:0,10:10:30.09:372,30,0
chr10	110065444	.	TTC	T	10050.72	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.318;DP=737;FS=1.609;HRun=0;HaplotypeScore=87.4292;InbreedingCoeff=0.9998;MQ=89.14;MQ0=1;MQRankSum=-2.232;QD=34.54;ReadPosRankSum=0.359;VQSLOD=6.9434;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,47:49:99:1542,114,0	0/0:11,0:11:33.10:0,33,551	0/0:24,0:24:57.17:0,57,895	0/0:29,0:29:70.44:0,70,1132	0/0:19,0:19:51.16:0,51,858	0/0:17,0:17:48.16:0,48,815	0/0:21,0:21:63.20:0,63,1077	1/1:2,35:37:99:1380,102,0	0/0:28,0:28:78.27:0,78,1359	0/0:30,0:29:90.30:0,90,1520	0/0:12,0:12:36.12:0,36,631	0/0:32,0:32:87.30:0,87,1517	0/0:24,0:24:69.22:0,69,1171	0/0:28,0:28:78.27:0,78,1356	0/0:42,0:42:99:0,117,2031	0/0:33,0:33:93.32:0,93,1630	1/1:3,28:31:72.24:974,72,0	1/1:0,13:13:36.12:487,36,0	1/1:3,24:27:72.19:911,72,0	1/1:4,27:31:81.15:1035,81,0	1/1:3,22:25:66.22:893,66,0	0/0:28,0:28:81.28:0,81,1416	0/0:21,0:21:57.18:0,57,964	0/0:25,0:25:72.25:0,72,1262	0/0:22,0:22:60.19:0,60,1024	1/1:2,30:32:37.68:1124,38,0	1/1:1,35:35:99:1339,99,0	1/1:0,10:10:27.09:365,27,0
chr10	110065697	.	CT	C	8654.44	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.551;DP=667;FS=5.042;HRun=1;HaplotypeScore=65.7360;InbreedingCoeff=0.9996;MQ=72.84;MQ0=0;MQRankSum=-2.971;QD=36.21;ReadPosRankSum=0.913;VQSLOD=5.1794;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,49:49:99:1673,120,0	0/0:23,0:23:69.22:0,69,1062	0/0:24,0:24:51.71:0,52,827	0/0:15,0:16:40.36:0,40,576	0/0:21,0:21:63.21:0,63,1004	0/0:18,0:18:54.14:0,54,831	0/0:16,0:16:48.13:0,48,715	1/1:0,29:29:87.27:1179,87,0	0/0:29,0:29:87.24:0,87,1296	0/0:22,0:22:66.21:0,66,1014	0/0:17,0:17:51.17:0,51,808	0/0:30,0:30:90.29:0,90,1408	0/0:32,0:32:96.31:0,96,1506	0/0:20,0:20:60.18:0,60,910	0/0:39,0:39:99:0,117,1844	0/0:41,0:41:99:0,123,1940	1/1:0,29:29:72.13:977,72,0	1/1:0,18:18:54.18:753,54,0	1/1:0,21:21:62.93:785,63,0	1/1:0,16:16:36.08:480,36,0	1/1:0,21:21:48.16:669,48,0	0/0:21,0:21:63.19:0,63,957	0/0:19,0:19:54.15:0,54,812	0/0:18,0:18:54.06:0,54,756	0/0:22,0:22:66.20:0,66,1008	1/1:1,26:27:32.88:980,33,0	1/1:0,20:20:60.20:826,60,0	1/1:0,9:9:24.08:333,24,0
chr10	110073037	.	GT	G	7720.78	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.427;DP=773;FS=0.584;HRun=6;HaplotypeScore=74.3419;InbreedingCoeff=0.9999;MQ=72.67;MQ0=0;MQRankSum=-1.850;QD=27.97;ReadPosRankSum=0.831;VQSLOD=5.3896;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:37:81.04:984,81,0	0/0:12,0:12:33.11:0,33,434	0/0:32,0:31:57.28:0,57,903	0/0:23,0:23:44.38:0,44,642	0/0:33,0:33:93.28:0,93,1195	0/0:36,0:36:99:0,102,1341	0/0:20,0:20:54.18:0,54,710	1/1:6,28:34:84.12:886,84,0	0/0:20,0:20:51.64:0,52,666	0/0:34,0:34:87.28:0,87,1133	0/0:23,0:23:66.20:0,66,854	0/0:33,0:33:93.30:0,93,1222	0/0:18,0:18:54.18:0,54,710	0/0:27,0:27:81.25:0,81,1050	0/0:47,0:47:99:0,138,1800	0/0:37,0:37:93.30:0,93,1222	1/1:2,28:30:81.20:871,81,0	1/1:0,16:16:45.11:484,45,0	1/1:2,16:18:45.11:483,45,0	1/1:2,28:30:84.21:903,84,0	1/1:0,22:22:63.16:677,63,0	0/0:26,0:26:78.24:0,78,1011	0/0:30,0:30:84.27:0,84,1105	0/0:21,0:21:63.20:0,63,828	0/0:25,0:25:75.23:0,75,971	1/1:3,43:46:56.51:1305,57,0	1/1:3,26:28:75.19:806,75,0	1/1:3,11:14:30.07:322,30,0
chr10	110074798	.	GC	G	6015.79	PASS	AB=0.713;AC=20;AF=0.357;AN=56;BaseQRankSum=17.364;DP=685;FS=0.636;HRun=8;HaplotypeScore=86.0976;InbreedingCoeff=0.8913;MQ=87.32;MQ0=0;MQRankSum=-3.241;QD=22.53;ReadPosRankSum=2.618;VQSLOD=5.3492;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,30:34:87.14:839,87,0	0/1:6,1:7:7.90:8,0,196	0/0:27,1:28:45.75:0,46,764	0/0:22,0:22:25.99:0,26,470	0/0:30,0:30:75.21:0,75,891	0/0:17,1:18:22.18:0,22,550	0/0:25,2:27:17.28:0,17,773	1/1:7,15:22:42.05:406,42,0	0/0:25,0:25:75.20:0,75,883	0/0:26,0:26:66.17:0,66,765	0/0:16,0:16:37.07:0,37,456	0/0:34,0:34:99:0,99,1128	0/0:13,0:13:36.11:0,36,433	0/0:31,0:31:90.26:0,90,1063	0/0:32,0:32:90.18:0,90,1033	0/0:28,0:28:69.20:0,69,822	1/1:4,21:26:56.11:527,56,0	1/1:1,17:18:48.07:463,48,0	1/1:3,18:21:51.06:487,51,0	1/1:4,21:25:57.08:549,57,0	1/1:3,38:41:99:1014,105,0	0/0:29,0:29:72.21:0,72,858	0/0:22,0:22:63.17:0,63,736	0/0:20,0:20:60.14:0,60,706	0/0:17,0:17:48.14:0,48,568	0/1:5,22:27:0.37:564,0,0	1/1:0,22:22:66.11:637,66,0	1/1:4,20:24:54.08:521,54,0
chr10	110075366	.	C	CTG	9423.03	PASS	AB=0.601;AC=16;AF=0.286;AN=56;BaseQRankSum=3.102;DP=916;FS=38.849;HRun=0;HaplotypeScore=143.6208;InbreedingCoeff=0.6652;MQ=60.11;MQ0=6;MQRankSum=-3.595;QD=27.55;ReadPosRankSum=-1.567;VQSLOD=3.1458;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,31:40:41.57:897,0,42	0/0:12,0:13:32.92:0,33,371	0/0:32,0:22:42.08:0,42,486	0/0:36,0:24:42.60:0,43,502	0/0:20,0:20:39.12:0,39,480	0/0:30,0:30:66.19:0,66,799	0/0:22,0:22:27.08:0,27,332	1/1:16,32:47:76.40:1441,76,0	0/0:38,0:40:96.05:0,96,1100	0/0:47,0:47:99:0,114,1360	0/0:18,0:18:38.47:0,38,439	0/0:48,0:48:99:0,108,1292	0/0:36,0:36:81.19:0,81,966	0/0:41,0:43:99:0,111,1283	0/0:36,0:36:93.29:0,93,1144	0/0:35,0:35:87.25:0,87,1046	0/1:6,14:20:19.69:729,0,20	1/1:14,18:32:66.22:1038,66,0	1/1:9,6:15:21.06:316,21,0	0/1:7,16:24:3.82:456,0,4	1/1:28,36:65:99:2164,141,0	0/0:30,0:30:66.19:0,66,806	0/0:16,0:16:36.11:0,36,436	0/0:33,0:34:93.12:0,93,1121	0/0:37,0:37:84.24:0,84,1018	0/1:24,27:50:22.87:1463,0,23	1/1:8,19:28:8.22:645,8,0	1/1:8,8:15:18.06:275,18,0
chr10	110075516	.	GCA	G	2966.13	PASS	AB=0.701;AC=10;AF=0.179;AN=56;BaseQRankSum=13.562;DP=887;FS=102.639;HRun=0;HaplotypeScore=227.8398;InbreedingCoeff=0.3033;MQ=55.74;MQ0=8;MQRankSum=-13.263;QD=11.41;ReadPosRankSum=-0.931;VQSLOD=0.3919;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,13:17:0.01:1,0,0	0/0:10,0:10:27.09:0,27,494	0/0:21,0:9:17.71:0,18,228	0/0:36,0:13:21.21:0,21,246	0/0:28,0:28:46.65:0,47,908	0/0:27,0:26:66.06:0,66,1111	0/0:55,0:55:99:0,107,1673	0/1:27,8:30:99:357,0,284	0/0:39,0:39:92.89:0,93,1587	0/0:51,0:51:99:0,147,2580	0/0:15,0:15:42.14:0,42,769	0/0:47,0:47:99:0,135,2395	0/0:33,0:33:84.26:0,84,1464	0/0:45,0:45:99:0,129,2226	0/0:28,0:28:81.18:0,81,1465	0/0:35,0:35:99:0,105,1854	0/0:2,2:4:2.88:0,3,39	1/1:2,10:12:27.05:353,27,0	0/1:14,4:18:99:200,0,223	0/0:15,11:25:1.85:0,2,24	0/1:42,28:66:31.87:32,0,95	0/0:20,0:20:54.17:0,54,931	0/0:14,0:14:35.90:0,36,605	0/0:50,0:50:99:0,141,2433	0/0:41,0:40:87.15:0,87,1498	0/1:34,38:72:99:1497,0,687	1/1:7,8:15:18.06:242,18,0	0/1:7,12:19:14.25:435,0,14
chr10	110075552	.	GTA	G	181.14	PASS	AB=0.776;AC=5;AF=0.089;AN=56;BaseQRankSum=8.680;DP=1028;FS=43.701;HRun=0;HaplotypeScore=235.3724;InbreedingCoeff=0.0272;MQ=53.61;MQ0=13;MQRankSum=-6.951;QD=1.63;ReadPosRankSum=1.941;VQSLOD=1.0621;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,6:16:0:0,0,0	0/0:10,0:10:30.01:0,30,464	0/0:29,0:9:15:0,15,233	0/0:46,1:17:31.39:0,31,508	0/0:37,0:37:81.67:0,82,1404	0/0:41,0:41:99:0,100,1800	0/0:83,0:83:99:0,171,3130	0/0:23,1:21:6.36:0,6,485	0/0:61,0:61:99:0,139,2595	0/0:60,0:60:99:0,181,3137	0/0:13,0:13:39.12:0,39,704	0/0:60,0:60:99:0,177,3027	0/0:51,0:51:99:0,141,2384	0/0:60,0:60:99:0,151,3059	0/0:42,0:42:99:0,120,2155	0/0:39,0:39:83.36:0,83,1860	0/0:2,2:4:5.30:0,5,41	0/1:5,4:9:18.67:19,0,46	0/1:14,3:15:32.38:32,0,238	0/0:16,3:19:3.01:0,3,56	0/0:56,17:70:16.28:0,16,214	0/0:25,0:25:72.04:0,72,1170	0/0:18,0:18:48.14:0,48,831	0/0:61,0:61:99:0,171,3026	0/0:50,0:50:99:0,111,1973	0/1:35,17:52:99:228,0,910	0/0:8,1:9:10.33:0,10,55	0/1:11,3:14:2.09:2,0,239
chr10	110075577	.	C	CACACGT	1696.32	PASS	AB=0.819;AC=8;AF=0.143;AN=56;BaseQRankSum=9.291;DP=1016;FS=76.844;HRun=0;HaplotypeScore=268.6059;InbreedingCoeff=-0.0000;MQ=50.92;MQ0=15;MQRankSum=-8.899;QD=16.16;ReadPosRankSum=-2.299;VQSLOD=0.3975;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,3:14:3.48:0,3,56	0/0:8,0:8:24.08:0,24,612	0/0:32,0:5:10.70:0,11,300	0/0:54,0:18:26.75:0,27,868	0/0:36,0:36:89.47:0,89,2243	0/0:40,0:40:92.43:0,92,2280	0/0:86,0:86:99:0,171,4187	0/1:17,2:18:99:184,0,329	0/0:61,0:61:99:0,126,3072	0/0:59,0:58:99:0,166,3993	0/0:18,0:18:54.14:0,54,1250	0/0:63,0:63:99:0,184,4471	0/0:44,0:44:99:0,123,2990	0/0:62,0:62:99:0,178,4389	0/0:45,0:45:99:0,126,3119	0/0:44,0:44:99:0,126,3165	0/1:4,2:5:79.39:105,0,79	0/1:4,3:7:89.90:211,0,90	0/1:9,3:11:99:377,0,168	0/0:15,1:16:6.02:0,6,112	0/0:64,7:69:1.33:0,1,104	0/0:30,0:30:90.31:0,90,2206	0/0:14,0:14:39.13:0,39,961	0/0:59,0:59:99:0,165,3975	0/0:51,0:51:99:0,117,2871	0/1:31,9:39:99:913,0,923	1/1:3,1:4:3:25,3,0	0/1:14,1:15:12.53:13,0,173
chr10	110075583	.	TGC	T	116.16	PASS	AB=0.979;AC=11;AF=0.196;AN=56;BaseQRankSum=8.206;DP=993;FS=0.798;HRun=0;HaplotypeScore=195.9624;InbreedingCoeff=0.3828;MQ=50.44;MQ0=12;MQRankSum=-7.511;QD=0.61;ReadPosRankSum=-2.605;VQSLOD=1.6838;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:14:2.99:23,3,0	0/0:9,0:9:27.02:0,27,445	0/0:30,0:6:14.64:0,15,220	0/0:52,0:17:39.12:0,39,663	0/0:33,0:33:84.29:0,84,1557	0/0:41,0:41:93.18:0,93,1704	0/0:83,0:83:99:0,158,2707	0/1:23,0:20:1.93:2,0,242	0/0:56,0:56:99:0,114,2041	0/0:59,0:58:99:0,174,3127	0/0:19,0:19:57.13:0,57,894	0/0:65,0:65:99:0,195,3421	0/0:42,0:42:99:0,117,2169	0/0:62,0:62:99:0,177,3196	0/0:44,0:44:99:0,129,2317	0/0:42,0:42:99:0,126,2351	0/0:6,0:5:11.16:0,11,60	0/1:7,0:7:18.25:51,0,18	0/1:11,0:10:14.17:14,0,71	1/1:18,0:18:2.38:17,2,0	0/1:59,8:66:0.72:1,0,1	0/0:30,0:30:87.13:0,87,1594	0/0:14,0:14:39.13:0,39,732	0/0:59,0:59:99:0,168,3080	0/0:52,0:52:99:0,120,2196	0/1:36,0:35:90.69:91,0,230	0/0:4,0:4:2.82:0,3,15	1/1:12,0:11:9.62:52,10,0
chr10	110075585	.	C	CGCGTGT	1557.90	PASS	AB=0.957;AC=10;AF=0.179;AN=56;BaseQRankSum=9.217;DP=989;FS=11.558;HRun=0;HaplotypeScore=253.8554;InbreedingCoeff=0.4470;MQ=50.51;MQ0=13;MQRankSum=-8.753;QD=8.70;ReadPosRankSum=-2.806;VQSLOD=0.9163;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,1:13:3.01:55,3,0	0/0:9,0:9:24.05:0,24,536	0/0:31,0:6:14.53:0,15,270	0/0:49,0:16:39.11:0,39,855	0/0:34,0:34:84.20:0,84,1938	0/0:42,0:42:93.04:0,93,2115	0/0:85,0:85:99:0,152,3166	0/1:24,0:22:99:202,0,218	0/0:55,0:55:99:0,108,2528	0/0:59,0:58:99:0,172,3958	0/0:19,0:19:51.13:0,51,1090	0/0:65,0:65:99:0,192,4261	0/0:40,0:40:99:0,114,2658	0/0:61,0:61:99:0,172,4015	0/0:45,0:45:99:0,126,2868	0/0:42,0:42:99:0,126,2967	0/0:5,1:5:9.50:0,10,99	0/0:7,0:7:10.83:0,11,86	0/1:9,0:9:63.51:112,0,64	1/1:7,6:16:6:70,6,0	0/1:64,2:65:1.23:2,0,1	0/0:29,0:29:87.27:0,87,1960	0/0:15,0:15:39.12:0,39,904	0/0:61,0:61:99:0,171,3801	0/0:52,0:52:99:0,120,2803	0/1:25,6:35:99:1031,0,118	0/0:3,0:3:2.79:0,3,14	1/1:7,1:11:11.99:226,12,0
chr10	110075588	.	GCA	G	909.50	PASS	AB=0.886;AC=13;AF=0.232;AN=56;BaseQRankSum=9.135;DP=959;FS=15.211;HRun=0;HaplotypeScore=186.5769;InbreedingCoeff=0.3329;MQ=50.54;MQ0=13;MQRankSum=-8.901;QD=4.86;ReadPosRankSum=-3.764;VQSLOD=1.5420;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:13,1:13:3.01:36,3,0	0/0:9,0:9:27.09:0,27,526	0/0:27,0:6:15.93:0,16,227	0/0:47,0:15:39.11:0,39,664	0/0:33,0:33:81.54:0,82,1573	0/0:40,0:40:90.65:0,91,1788	0/0:79,0:79:99:0,140,2696	0/1:18,4:19:99:235,0,293	0/0:56,0:56:99:0,112,2116	0/0:59,0:58:99:0,169,3354	0/0:16,0:16:48.16:0,48,945	0/0:65,0:65:99:0,196,3823	0/0:39,0:39:99:0,108,2152	0/0:59,0:59:99:0,175,3429	0/0:44,0:44:99:0,129,2509	0/0:42,0:42:99:0,126,2467	0/1:5,1:5:8.45:8,0,104	0/1:7,0:7:25.47:25,0,130	0/1:9,1:9:72.90:73,0,102	1/1:14,1:15:3.01:49,3,0	1/1:53,13:65:2.20:17,2,0	0/0:28,0:28:84.27:0,84,1638	0/0:13,0:13:39.13:0,39,758	0/0:60,0:60:99:0,171,3253	0/0:52,0:52:99:0,117,2331	0/1:28,8:35:99:472,0,205	0/0:2,1:3:2.92:0,3,28	1/1:7,4:10:12.03:146,12,0
chr10	110075589	.	CAT	C	302.18	PASS	AB=0.970;AC=10;AF=0.179;AN=56;BaseQRankSum=8.727;DP=955;FS=8.162;HRun=0;HaplotypeScore=186.8124;InbreedingCoeff=0.3587;MQ=50.50;MQ0=13;MQRankSum=-8.125;QD=2.63;ReadPosRankSum=-3.826;VQSLOD=1.1792;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:13:2.92:17,3,0	0/0:9,0:9:27.08:0,27,509	0/0:26,0:6:15.74:0,16,167	0/0:46,1:14:36.01:0,36,536	0/0:33,0:33:79.65:0,80,1547	0/0:40,0:40:90.73:0,91,1685	0/0:78,0:78:99:0,138,2415	0/1:21,1:19:54.31:54,0,191	0/0:54,0:54:99:0,106,1910	0/0:58,0:57:99:0,171,3303	0/0:16,0:16:48.15:0,48,884	0/0:65,0:65:99:0,196,3650	0/0:38,0:38:99:0,108,2083	0/0:59,0:59:99:0,172,3270	0/0:45,0:45:99:0,132,2382	0/0:42,0:42:99:0,126,2458	0/0:6,0:5:9.05:0,9,99	0/1:6,0:6:2.46:2,0,123	0/1:11,0:9:31.71:32,0,73	1/1:14,1:15:2.99:24,3,0	0/0:67,0:66:1.60:0,2,9	0/0:28,0:28:84.29:0,84,1609	0/0:13,0:13:39.08:0,39,711	0/0:59,0:59:99:0,156,3091	0/0:54,0:54:99:0,123,2270	0/1:33,3:35:99:223,0,177	0/0:3,0:3:2.87:0,3,19	1/1:9,2:10:11.84:86,12,0
chr10	110075592	.	G	GCA	132.01	PASS	AB=0.987;AC=5;AF=0.089;AN=56;BaseQRankSum=8.308;DP=960;FS=8.406;HRun=0;HaplotypeScore=190.9623;InbreedingCoeff=0.1550;MQ=50.57;MQ0=13;MQRankSum=-8.356;QD=1.74;ReadPosRankSum=-2.796;VQSLOD=0.8353;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:0.89:0,1,2	0/0:9,0:9:27.09:0,27,435	0/0:23,0:4:8.12:0,8,141	0/0:44,0:15:38.88:0,39,547	0/0:33,0:33:83.90:0,84,1359	0/0:39,0:39:83.89:0,84,1366	0/0:76,0:76:99:0,132,2073	0/1:24,1:22:99:137,0,239	0/0:53,0:53:99:0,102,1638	0/0:59,0:58:99:0,172,2748	0/0:16,0:16:45.15:0,45,728	0/0:65,0:65:99:0,193,3071	0/0:39,0:39:99:0,111,1754	0/0:60,0:60:99:0,175,2815	0/0:45,0:45:99:0,132,2076	0/0:44,0:44:99:0,129,2068	0/0:7,0:6:6.02:0,6,93	0/0:6,0:6:14.17:0,14,158	0/0:11,0:9:9.88:0,10,77	0/0:16,0:16:3.01:0,3,37	0/0:58,9:66:2.70:0,3,12	0/0:30,0:30:87.28:0,87,1384	0/0:14,0:14:39.13:0,39,629	0/0:61,0:61:99:0,169,2702	0/0:54,0:53:99:0,120,1921	0/1:37,0:36:76.25:76,0,229	1/1:3,0:3:1.76:5,2,0	0/1:11,0:10:15.99:16,0,19
chr10	110075594	.	G	GCACA	51.40	PASS	AB=0.990;AC=5;AF=0.089;AN=56;BaseQRankSum=6.178;DP=959;FS=2.799;HRun=0;HaplotypeScore=224.0739;InbreedingCoeff=0.2146;MQ=50.68;MQ0=13;MQRankSum=-6.048;QD=0.89;ReadPosRankSum=-2.776;VQSLOD=2.5504;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:0:0,0,0	0/0:10,0:10:27.09:0,27,566	0/0:23,0:4:7.74:0,8,185	0/0:42,0:15:36.08:0,36,643	0/0:33,0:33:83.42:0,83,1756	0/0:40,0:40:86.41:0,86,1782	0/0:71,0:71:99:0,120,2513	0/0:27,0:24:59.50:0,60,763	0/0:53,0:53:99:0,101,2097	0/0:62,0:61:99:0,172,3579	0/0:16,0:16:48.16:0,48,993	0/0:66,0:66:99:0,196,4046	0/0:39,0:39:99:0,111,2246	0/0:61,0:61:99:0,178,3603	0/0:44,0:44:99:0,129,2634	0/0:44,0:44:99:0,129,2690	0/0:8,0:7:11.54:0,12,201	0/0:6,0:6:4.23:0,4,182	0/1:10,0:8:3.73:4,0,225	0/0:16,0:16:3.01:0,3,57	0/0:65,3:69:1.74:0,2,49	0/0:31,0:31:90.31:0,90,1871	0/0:14,0:14:39.13:0,39,802	0/0:61,0:61:99:0,172,3413	0/0:52,0:51:99:0,117,2375	0/1:33,0:33:53.19:53,0,782	1/1:2,1:3:3.01:86,3,0	0/1:11,0:10:9.05:9,0,72
chr10	110075597	.	T	TGC	1309.28	PASS	AB=0.898;AC=12;AF=0.222;AN=54;BaseQRankSum=5.865;DP=948;FS=2.774;HRun=0;HaplotypeScore=181.6699;InbreedingCoeff=0.4365;MQ=50.79;MQ0=15;MQRankSum=-9.041;QD=7.48;ReadPosRankSum=-2.999;VQSLOD=2.9405;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:10,0:10:27.08:0,27,391	0/0:25,0:5:9.02:0,9,119	0/0:41,0:15:32.79:0,33,393	0/0:33,0:33:84.25:0,84,1207	0/0:40,0:40:84.27:0,84,1258	0/0:72,0:72:99:0,120,1742	0/1:19,4:24:38.15:408,0,38	0/0:53,0:53:96.74:0,97,1405	0/0:62,0:61:99:0,181,2549	0/0:18,0:18:54.11:0,54,718	0/0:67,0:67:99:0,196,2770	0/0:40,0:40:99:0,114,1636	0/0:59,0:59:99:0,174,2512	0/0:41,0:41:99:0,117,1716	0/0:43,0:43:99:0,129,1900	0/1:7,1:7:45.15:45,0,97	0/1:6,0:6:1.61:2,0,63	1/1:8,1:7:2.36:93,2,0	1/1:5,8:14:3.01:31,3,0	1/1:63,4:67:3.19:71,3,0	0/0:31,0:31:92.93:0,93,1307	0/0:13,0:13:33.11:0,33,502	0/0:60,0:60:99:0,162,2359	0/0:50,0:49:99:0,111,1663	0/1:25,7:34:10.06:666,0,10	0/0:3,0:3:2.04:0,2,6	1/1:5,2:8:12.01:137,12,0
chr10	110075599	.	TGCGC	T	250.87	PASS	AB=0.930;AC=8;AF=0.148;AN=54;BaseQRankSum=7.765;DP=926;FS=0.000;HRun=0;HaplotypeScore=199.0312;InbreedingCoeff=-0.0199;MQ=51.03;MQ0=15;MQRankSum=-7.581;QD=2.76;ReadPosRankSum=-1.922;VQSLOD=1.9139;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:9,0:9:27.09:0,27,604	0/0:24,0:5:8.92:0,9,183	0/0:42,0:15:25.39:0,25,449	0/0:33,0:33:84.18:0,84,1765	0/0:39,0:39:83.96:0,84,2023	0/0:70,0:70:99:0,120,2834	0/1:23,1:22:99:107,0,592	0/0:52,0:52:95.40:0,95,2225	0/0:63,0:62:99:0,165,3896	0/0:16,0:16:48.14:0,48,1132	0/0:65,0:65:99:0,190,4679	0/0:40,0:40:99:0,114,2678	0/0:59,0:59:99:0,171,4104	0/0:39,0:39:99:0,114,2940	0/0:43,0:43:99:0,126,3219	0/1:6,2:7:9.95:10,0,89	0/1:6,1:7:47.92:48,0,80	0/1:8,0:6:31.31:31,0,184	0/0:14,0:14:3.01:0,3,72	0/0:61,2:63:3.10:0,3,117	0/0:31,0:31:90.12:0,90,2159	0/0:12,0:12:33.11:0,33,840	0/0:60,0:60:99:0,171,4489	0/0:50,0:49:99:0,111,2782	0/1:31,2:32:99:131,0,884	1/1:2,1:3:2.04:6,2,0	0/1:8,0:7:42.46:42,0,98
chr10	110075601	.	C	CAT	41.69	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=5.395;DP=909;FS=2.789;HRun=0;HaplotypeScore=175.9976;InbreedingCoeff=0.6051;MQ=51.07;MQ0=14;MQRankSum=-5.213;QD=3.79;ReadPosRankSum=0.213;VQSLOD=2.9175;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:10,0:10:27.09:0,27,436	0/0:22,0:4:9.03:0,9,147	0/0:38,0:13:20.87:0,21,375	0/0:32,0:32:80.83:0,81,1254	0/0:37,0:37:77.86:0,78,1270	0/0:69,0:69:99:0,114,1851	0/0:22,0:22:34.61:0,35,498	0/0:51,0:51:93.18:0,93,1435	0/0:57,0:56:99:0,166,2603	0/0:16,0:16:48.16:0,48,776	0/0:64,0:64:99:0,187,3008	0/0:40,0:40:99:0,114,1777	0/0:59,0:59:99:0,169,2683	0/0:38,0:38:99:0,114,1831	0/0:41,0:41:99:0,123,1981	0/0:7,0:7:5.74:0,6,22	1/1:4,3:7:7.15:118,7,0	0/0:8,0:6:11.05:0,11,127	0/0:13,0:13:3.01:0,3,48	0/0:52,5:65:5.88:0,6,81	0/0:30,0:30:87.28:0,87,1354	0/0:12,0:12:33.11:0,33,536	0/0:61,0:61:99:0,172,2772	0/0:50,0:49:99:0,111,1749	0/0:35,0:34:40.26:0,40,590	1/1:4,0:4:2.90:19,3,0	0/0:8,0:7:4.76:0,5,41
chr10	110075648	.	GTATC	G	436.05	PASS	AB=0.887;AC=5;AF=0.089;AN=56;BaseQRankSum=8.666;DP=767;FS=1.627;HRun=0;HaplotypeScore=175.8476;InbreedingCoeff=0.0067;MQ=55.90;MQ0=4;MQRankSum=-8.185;QD=4.19;ReadPosRankSum=-2.258;VQSLOD=2.4877;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,3:17:0.12:0,0,0	0/0:18,0:18:51.18:0,51,1404	0/0:32,1:15:35.79:0,36,876	0/0:36,0:24:61.16:0,61,1341	0/0:22,0:22:60.21:0,60,1578	0/0:25,0:25:51.14:0,51,1401	0/0:31,0:31:75.05:0,75,2078	0/0:13,0:13:33.11:0,33,825	0/0:24,0:24:57.18:0,57,1488	0/0:48,0:48:99:0,144,3808	0/0:18,0:18:54.19:0,54,1492	0/0:51,0:51:99:0,145,3918	0/0:27,0:27:75.24:0,75,1971	0/0:41,0:41:99:0,114,2968	0/0:45,0:45:99:0,129,3437	0/0:39,0:39:99:0,117,3145	0/1:10,1:10:66.07:66,0,284	0/1:8,4:12:99:204,0,108	0/1:23,1:23:67.39:67,0,942	0/0:10,0:10:6.02:0,6,168	0/0:42,1:42:8.73:0,9,223	0/0:24,0:24:66.16:0,66,1637	0/0:10,0:10:24.08:0,24,586	0/0:50,0:50:99:0,144,3932	0/0:33,0:33:84.29:0,84,2209	0/1:37,2:38:99:207,0,1872	0/0:16,0:16:1.38:0,1,501	0/0:6,0:5:11.77:0,12,306
chr10	110075679	.	T	TGCAC	1689.28	PASS	AB=0.824;AC=8;AF=0.148;AN=54;BaseQRankSum=7.872;DP=869;FS=48.589;HRun=0;HaplotypeScore=209.4757;InbreedingCoeff=-0.0786;MQ=49.54;MQ0=20;MQRankSum=-8.354;QD=8.12;ReadPosRankSum=0.685;VQSLOD=1.0211;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,7:25:0.70:1,0,1	0/0:20,0:20:51.17:0,51,1000	0/0:48,0:13:33.11:0,33,657	0/0:60,0:20:51.16:0,51,917	0/0:24,0:24:63.22:0,63,1254	0/0:23,0:23:53.56:0,54,1006	0/0:36,0:36:80.18:0,80,1600	0/1:15,3:16:99:205,0,583	0/0:27,0:27:75.23:0,75,1446	0/0:51,0:49:99:0,141,2778	0/0:15,0:15:42.13:0,42,791	0/0:51,0:51:99:0,154,3028	0/0:30,0:30:84.29:0,84,1649	0/0:39,0:39:99:0,111,2211	0/0:47,0:47:99:0,138,2568	0/0:39,0:39:99:0,117,2253	0/1:16,4:20:99:129,0,343	0/1:14,1:15:15.58:16,0,368	0/1:13,3:13:54.12:54,0,396	./.	0/1:41,3:43:2.73:3,0,27	0/0:31,0:31:87.28:0,87,1702	0/0:12,0:12:27.09:0,27,525	0/0:60,0:60:99:0,172,3305	0/0:35,0:35:93.30:0,93,1819	0/1:35,13:48:99:934,0,1311	0/1:10,11:21:99:472,0,336	0/0:2,0:2:6:0,6,84
chr10	110075688	.	ATG	A	2044.13	PASS	AB=0.703;AC=13;AF=0.241;AN=54;BaseQRankSum=12.273;DP=900;FS=89.272;HRun=0;HaplotypeScore=181.7513;InbreedingCoeff=0.1908;MQ=49.16;MQ0=22;MQRankSum=-11.377;QD=8.41;ReadPosRankSum=-0.398;VQSLOD=-0.1138;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,9:28:5.58:75,6,0	0/0:17,0:17:42.14:0,42,708	0/0:45,0:11:12.04:0,12,181	0/0:58,0:15:24.08:0,24,403	0/0:25,0:25:57.17:0,57,960	0/0:25,0:25:53.71:0,54,911	0/0:37,0:37:71.50:0,71,1210	0/1:9,10:17:65.04:350,0,65	0/0:27,0:27:69.24:0,69,1162	0/0:57,0:56:99:0,143,2271	0/0:18,0:18:39.13:0,39,648	0/0:48,0:48:99:0,132,2189	0/0:34,0:34:87.30:0,87,1442	0/0:39,0:39:99:0,99,1662	0/0:46,0:46:99:0,116,2106	0/0:42,0:42:99:0,114,1918	0/1:9,11:21:26.24:247,0,26	0/1:8,7:16:44.22:253,0,44	0/1:6,6:12:15.86:207,0,16	./.	0/1:36,21:55:7.46:31,0,7	0/0:34,0:34:81.25:0,81,1316	0/1:11,1:12:11.52:12,0,378	0/0:59,0:59:99:0,144,2397	0/0:33,0:33:84.29:0,84,1417	0/1:27,18:51:99:671,0,253	1/1:4,9:22:1.02:300,1,0	1/1:1,1:2:5.69:50,6,0
chr10	110075717	.	C	CGT	5775.10	PASS	AB=0.596;AC=17;AF=0.304;AN=56;BaseQRankSum=-3.007;DP=998;FS=53.355;HRun=0;HaplotypeScore=191.9645;InbreedingCoeff=0.7218;MQ=49.28;MQ0=30;MQRankSum=-6.792;QD=17.24;ReadPosRankSum=-4.861;VQSLOD=2.0471;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,28:41:32.68:552,33,0	0/0:19,0:19:48.05:0,48,587	0/0:34,0:6:9.03:0,9,114	0/0:54,0:16:33.08:0,33,382	0/0:27,0:27:60.18:0,60,748	0/0:32,0:31:72.13:0,72,902	0/0:38,0:40:83.58:0,84,1056	0/1:10,17:24:19.12:792,0,19	0/0:30,0:29:66.14:0,66,807	0/0:50,0:49:99:0,126,1588	0/0:22,0:22:54.16:0,54,673	0/0:46,0:45:99:0,111,1410	0/0:36,0:36:96.29:0,96,1197	0/0:44,0:44:99:0,111,1369	0/0:46,0:46:99:0,117,1475	0/0:49,0:49:99:0,117,1488	1/1:8,17:25:33.32:566,33,0	1/1:9,19:28:33.92:680,34,0	1/1:12,8:15:24.08:401,24,0	1/1:9,9:19:12.02:175,12,0	0/1:34,53:84:46:463,0,46	0/0:31,0:31:78.19:0,78,937	0/0:12,0:12:18.06:0,18,229	0/0:55,0:58:99:0,121,1649	0/0:31,0:31:75.24:0,75,952	1/1:17,37:52:9.56:1632,10,0	1/1:13,9:22:7.52:398,8,0	0/1:2,8:10:7.90:116,0,8
chr10	110080737	.	GT	G	12363.31	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=16.320;DP=846;FS=1.117;HRun=1;HaplotypeScore=78.0038;InbreedingCoeff=0.9994;MQ=84.20;MQ0=0;MQRankSum=-2.470;QD=38.28;ReadPosRankSum=0.527;VQSLOD=5.3448;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,40:41:99:1604,117,0	0/0:15,0:15:45.15:0,45,718	0/0:28,0:28:84.24:0,84,1261	0/0:22,0:22:66.19:0,66,979	0/0:28,0:28:84.29:0,84,1329	0/0:18,0:18:54.18:0,54,854	0/0:23,0:23:69.24:0,69,1100	1/1:0,29:29:87.24:1149,87,0	0/0:33,0:33:99:0,99,1503	0/0:45,0:45:99:0,129,1972	0/0:18,0:18:54.18:0,54,860	0/0:38,0:38:99:0,114,1747	0/0:38,0:38:99:0,114,1767	0/0:35,0:35:99:0,105,1652	0/0:51,0:51:99:0,154,2411	0/0:33,0:33:99:0,99,1544	1/1:0,30:30:78.23:1069,78,0	1/1:0,25:25:60.20:839,60,0	1/1:0,34:34:99:1355,102,0	1/1:0,28:28:84.21:1150,84,0	1/1:0,47:47:99:1874,135,0	0/0:23,0:23:69.23:0,69,1087	0/0:12,0:12:36.08:0,36,544	0/0:33,0:33:99:0,99,1562	0/0:30,0:30:90.31:0,90,1432	1/1:2,37:39:21.47:1452,21,0	1/1:1,34:35:93.30:1286,93,0	1/1:0,15:15:42.14:587,42,0
chr10	110082019	.	AGGCTGTGAGG	A	6349.24	PASS	AB=0.628;AC=19;AF=0.339;AN=56;BaseQRankSum=12.390;DP=597;FS=15.977;HRun=0;HaplotypeScore=177.2311;InbreedingCoeff=0.8617;MQ=75.59;MQ0=0;MQRankSum=-9.800;QD=28.34;ReadPosRankSum=-0.607;VQSLOD=3.2870;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,25:40:45.15:1355,45,0	0/0:5,0:5:12.04:0,12,548	0/0:25,0:25:29.65:0,30,778	0/0:22,0:20:20.50:0,20,686	0/0:19,0:19:42.14:0,42,1741	0/0:17,0:17:33.11:0,33,1595	0/0:28,0:28:48.16:0,48,2348	1/1:20,5:25:15.03:272,15,0	0/0:21,0:21:48.16:0,48,2406	0/0:26,0:26:45.15:0,45,2003	0/0:9,0:9:12.04:0,12,594	0/0:26,0:26:54.17:0,54,2435	0/0:24,0:24:51.18:0,51,2440	0/0:17,0:17:36.12:0,36,1707	0/0:27,0:27:57.20:0,57,2804	0/0:23,0:23:54.19:0,54,2448	1/1:13,15:28:33.11:994,33,0	1/1:15,7:22:12.01:362,12,0	1/1:14,4:18:12.04:338,12,0	1/1:2,4:6:9.03:271,9,0	1/1:24,6:30:12.04:361,12,0	0/0:10,0:10:18.06:0,18,817	0/0:7,0:7:12.04:0,12,572	0/0:50,0:50:99:0,105,4871	0/0:17,0:17:36.12:0,36,1676	0/1:11,16:27:99:1222,0,99	1/1:6,14:20:33.11:994,33,0	1/1:5,3:8:6.02:181,6,0
chr10	110084125	.	TCTGCCTG	T	4771.88	PASS	AB=0.725;AC=19;AF=0.339;AN=56;BaseQRankSum=11.977;DP=693;FS=4.559;HRun=0;HaplotypeScore=158.0016;InbreedingCoeff=0.8074;MQ=64.64;MQ0=4;MQRankSum=-8.667;QD=18.28;ReadPosRankSum=0.390;VQSLOD=4.3117;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,14:38:24.08:554,24,0	0/0:14,0:14:30.10:0,30,969	0/0:26,0:17:16.30:0,16,419	0/0:32,0:24:9.71:0,10,197	0/0:15,0:15:9.03:0,9,279	0/0:19,0:19:33.11:0,33,1142	0/0:28,0:28:48.16:0,48,1634	1/1:18,5:23:18.06:379,18,0	0/0:33,0:33:66.21:0,66,2361	0/0:29,0:29:48.16:0,48,1553	0/0:6,0:6:6.02:0,6,222	0/0:36,0:36:69.24:0,69,2353	0/0:24,0:24:54.17:0,54,1785	0/0:32,0:32:63.22:0,63,2211	0/0:34,0:34:69.24:0,69,2471	0/0:20,0:20:45.13:0,45,1517	1/1:16,10:26:18.06:416,18,0	1/1:18,17:35:34.35:828,34,0	1/1:12,8:20:24.05:445,24,0	1/1:15,2:17:3.01:41,3,0	1/1:31,6:37:5.94:137,6,0	0/0:8,0:8:6.02:0,6,219	0/0:14,0:14:24.08:0,24,768	0/0:47,0:47:96.33:0,96,3269	0/0:15,0:15:27.09:0,27,880	0/1:23,14:37:23.71:864,0,24	1/1:6,15:21:42.14:970,42,0	1/1:5,2:7:6.02:139,6,0
chr10	110085347	.	A	AGGGCTGGAGAGGGTCCTTGTCTG	39259.47	PASS	AB=0.800;AC=55;AF=0.982;AN=56;BaseQRankSum=-0.032;DP=285;FS=8.050;HRun=0;HaplotypeScore=325.5085;InbreedingCoeff=-0.0303;MQ=58.32;MQ0=0;MQRankSum=-1.732;QD=137.75;ReadPosRankSum=1.430;VQSLOD=3.5334;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:15.05:1050,15,0	1/1:5,0:5:15.02:722,15,0	1/1:3,1:6:15.03:759,15,0	0/1:3,1:4:14.95:314,0,15	1/1:17,0:17:26.17:1178,26,0	1/1:10,0:10:18.06:1425,18,0	1/1:18,0:18:44.51:2721,45,0	1/1:12,0:12:33.10:1549,33,0	1/1:9,0:9:24.08:1539,24,0	1/1:11,0:11:30.10:1786,30,0	1/1:7,0:7:15.52:921,16,0	1/1:11,0:11:24.08:1379,24,0	1/1:13,0:13:33.11:2632,33,0	1/1:10,0:10:30.08:1354,30,0	1/1:12,0:11:12.04:863,12,0	1/1:16,0:15:48.16:3012,48,0	1/1:7,0:6:15.05:1019,15,0	1/1:7,0:7:18.04:1207,18,0	1/1:6,0:6:18.06:1269,18,0	1/1:15,0:15:27.08:1977,27,0	1/1:10,0:10:24.04:837,24,0	1/1:13,0:13:27.09:1575,27,0	1/1:6,0:6:10.28:751,10,0	1/1:5,0:5:9.03:721,9,0	1/1:14,0:14:33.11:2282,33,0	1/1:8,0:8:21.07:1346,21,0	1/1:19,0:19:45.13:2707,45,0	1/1:4,0:4:6.02:362,6,0
chr10	110086609	.	T	TGCGC	4615.68	PASS	AB=0.896;AC=20;AF=0.357;AN=56;BaseQRankSum=-0.863;DP=669;FS=1.298;HRun=0;HaplotypeScore=124.1006;InbreedingCoeff=0.6472;MQ=61.34;MQ0=8;MQRankSum=-1.597;QD=14.38;ReadPosRankSum=-2.771;VQSLOD=4.2566;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:38:52.40:715,52,0	0/0:11,0:10:27.06:0,27,404	0/0:14,0:12:32.88:0,33,520	0/0:26,0:20:48.67:0,49,726	0/0:19,0:18:39.13:0,39,617	0/0:20,0:20:45.15:0,45,726	0/0:27,0:27:64.05:0,64,932	1/1:28,0:27:68.36:880,68,0	0/0:18,0:18:51.10:0,51,781	0/0:21,0:20:54.63:0,55,900	0/0:8,0:8:18.06:0,18,301	0/1:24,0:24:10.93:11,0,472	0/0:26,0:25:33.99:0,34,721	0/0:26,0:26:2.89:0,3,539	0/1:44,0:44:73.36:73,0,682	0/0:32,0:32:70.83:0,71,1082	0/1:31,0:31:14.48:81,0,14	1/1:15,1:16:6.02:146,6,0	1/1:22,0:21:48.72:699,49,0	1/1:18,0:18:24.06:372,24,0	0/1:10,20:35:68.90:69,0,79	0/0:29,0:29:22.01:0,22,568	0/0:13,0:13:27.09:0,27,426	0/0:34,0:34:29.06:0,29,721	0/0:24,0:24:72.20:0,72,1169	1/1:9,23:33:45.77:985,46,0	1/1:21,0:21:11.19:208,11,0	1/1:11,0:11:21.07:375,21,0
chr10	110086611	.	C	CCGCGTGT	719.38	PASS	AB=0.860;AC=11;AF=0.196;AN=56;BaseQRankSum=9.112;DP=696;FS=1.181;HRun=0;HaplotypeScore=166.9458;InbreedingCoeff=0.0461;MQ=60.69;MQ0=9;MQRankSum=-1.446;QD=2.62;ReadPosRankSum=-0.855;VQSLOD=2.6783;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:40:73.10:80,0,73	0/0:10,0:9:14.11:0,14,437	0/0:14,0:12:36.11:0,36,552	0/0:26,0:20:48.55:0,49,751	0/0:15,0:17:39.13:0,39,676	0/0:19,0:20:42.59:0,43,755	0/0:31,0:32:34.99:0,35,979	0/0:28,0:27:29.35:0,29,259	0/0:19,0:19:50.89:0,51,865	0/0:24,0:23:56.06:0,56,924	0/0:9,0:9:18.06:0,18,338	0/0:17,0:25:4.08:0,4,500	0/0:21,0:29:11.18:0,11,731	0/0:18,0:29:7.18:0,7,582	0/1:23,0:43:46.36:46,0,785	0/0:29,0:32:72.48:0,72,1338	0/1:2,0:34:11.70:46,0,12	1/1:1,1:23:5.75:100,6,0	0/1:22,0:21:64.18:70,0,64	0/1:18,0:18:4.93:6,0,5	0/1:33,0:33:32.22:69,0,32	0/0:20,0:29:21.37:0,21,570	0/0:10,0:13:27.09:0,27,484	0/0:20,0:38:32.14:0,32,795	0/0:23,0:24:72.19:0,72,1360	0/1:29,0:29:82.92:187,0,83	0/1:3,0:21:2.68:209,0,3	0/1:12,0:12:11.18:53,0,11
chr10	110088793	.	T	TTC	51.48	PASS	AB=0.820;AC=7;AF=0.140;AN=50;BaseQRankSum=3.599;DP=142;FS=0.000;HRun=0;HaplotypeScore=33.2327;InbreedingCoeff=0.3528;MQ=48.63;MQ0=4;MQRankSum=-3.901;QD=1.61;ReadPosRankSum=1.797;VQSLOD=1.0277;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,1:10:13.15:33,0,13	0/0:2,0:2:6.02:0,6,92	0/0:10,0:8:17.97:0,18,236	0/0:8,0:4:12.04:0,12,190	0/0:2,0:2:3.01:0,3,48	0/0:2,0:2:6.01:0,6,74	0/0:9,0:10:12.90:0,13,423	1/1:10,0:10:10.58:55,11,0	0/0:4,0:4:12.04:0,12,194	0/0:6,0:6:18.05:0,18,262	./.	0/0:8,0:8:14.08:0,14,199	0/0:2,0:2:6.02:0,6,98	0/0:5,0:4:12.04:0,12,196	0/0:6,0:5:14.26:0,14,202	0/0:4,0:4:12.04:0,12,191	./.	0/0:8,0:8:4.36:0,4,19	0/0:10,0:8:7.71:0,8,86	0/0:6,1:7:13.84:0,14,70	0/1:3,1:4:1.42:1,0,7	0/0:2,0:2:3.01:0,3,49	0/0:4,0:4:12.04:0,12,196	0/0:5,0:5:15.05:0,15,242	0/0:3,0:3:6.02:0,6,98	1/1:4,1:5:2.09:38,2,0	0/1:2,1:3:0.32:40,0,0	./.
chr10	110088794	.	CT	C	724.39	PASS	AB=0.815;AC=13;AF=0.260;AN=50;BaseQRankSum=6.831;DP=148;FS=0.000;HRun=1;HaplotypeScore=27.5306;InbreedingCoeff=0.4932;MQ=48.99;MQ0=4;MQRankSum=-5.905;QD=12.71;ReadPosRankSum=2.455;VQSLOD=2.1343;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,4:10:24.01:262,24,0	0/0:3,0:3:9:0,9,117	0/0:10,0:8:24:0,24,307	0/0:8,0:4:12.04:0,12,191	0/0:2,0:2:3.01:0,3,48	0/0:2,0:2:6.02:0,6,95	0/0:11,0:11:20.09:0,20,443	0/1:8,2:10:8.29:64,0,8	0/0:4,0:4:12.04:0,12,191	0/0:6,0:6:18.06:0,18,288	./.	0/0:8,0:8:21.06:0,21,289	0/0:2,0:2:6.02:0,6,96	0/0:6,0:5:15.04:0,15,217	0/0:6,0:5:15.04:0,15,217	0/0:4,0:4:12.04:0,12,192	./.	1/1:2,6:8:2.51:136,3,0	0/1:8,2:8:27.18:27,0,52	0/1:5,2:7:32.33:98,0,32	1/1:1,3:4:8.99:94,9,0	0/0:2,0:2:3.01:0,3,48	0/0:4,0:4:12.04:0,12,192	0/0:6,0:6:18.04:0,18,263	0/0:4,0:4:12.02:0,12,157	1/1:3,2:5:10.75:114,11,0	1/1:2,1:3:8.98:87,9,0	./.
chr10	110088795	.	T	TTC	333.58	PASS	AB=0.975;AC=13;AF=0.260;AN=50;BaseQRankSum=6.540;DP=152;FS=0.000;HRun=0;HaplotypeScore=32.4773;InbreedingCoeff=0.4280;MQ=49.69;MQ0=4;MQRankSum=-6.636;QD=4.91;ReadPosRankSum=2.010;VQSLOD=1.3348;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,1:10:18.92:121,19,0	0/0:3,0:3:9:0,9,115	0/0:10,0:9:23.96:0,24,301	0/0:9,0:5:12.04:0,12,195	0/0:1,0:1:3.01:0,3,49	0/0:2,0:2:6.02:0,6,85	0/1:11,0:11:1.32:1,0,431	0/1:10,0:10:6.20:33,0,6	0/0:4,0:4:12.04:0,12,195	0/0:7,0:7:18.06:0,18,289	./.	0/0:8,0:8:22.31:0,22,309	0/0:2,0:2:6.02:0,6,98	0/0:6,0:5:15.04:0,15,221	0/0:6,0:5:15.05:0,15,231	0/0:5,0:5:12.04:0,12,194	./.	0/1:8,0:8:1.35:86,0,1	0/1:10,0:8:15.51:16,0,69	0/1:6,1:7:26.73:28,0,27	1/1:3,1:4:8.46:44,8,0	0/0:2,0:2:3.01:0,3,49	0/0:4,0:4:12.04:0,12,196	0/0:6,0:6:18.04:0,18,267	0/0:5,0:5:12.02:0,12,163	1/1:4,0:5:12.03:95,12,0	1/1:2,1:3:7.13:63,7,0	./.
chr10	110089649	.	CAA	C	1705.43	PASS	AB=0.813;AC=22;AF=0.393;AN=56;BaseQRankSum=9.871;DP=549;FS=2.040;HRun=19;HaplotypeScore=93.1354;InbreedingCoeff=0.7957;MQ=55.80;MQ0=15;MQRankSum=-1.534;QD=7.08;ReadPosRankSum=7.711;VQSLOD=-0.2078;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,9:19:33.46:202,33,0	0/0:3,0:5:8.38:0,8,72	0/0:21,0:5:11.86:0,12,104	0/0:23,0:10:8.61:0,9,53	0/0:22,1:25:13.12:0,13,287	0/0:10,0:12:14.89:0,15,118	0/1:16,2:21:16.79:17,0,215	1/1:13,8:22:25.29:176,25,0	0/0:18,0:19:44.96:0,45,454	0/0:24,0:23:40.57:0,41,386	0/0:15,1:15:23.89:0,24,221	0/0:23,0:24:10.40:0,10,169	0/0:18,0:20:25.13:0,25,342	0/0:16,1:19:16.22:0,16,262	0/0:23,0:23:38.60:0,39,425	0/0:14,0:17:25.12:0,25,176	1/1:11,12:24:35.14:243,35,0	1/1:10,7:16:19.27:145,19,0	1/1:7,7:16:21.19:139,21,0	1/1:11,8:18:8.80:79,9,0	1/1:3,5:8:14.88:105,15,0	0/0:9,0:12:18.43:0,18,115	0/0:14,0:14:25.81:0,26,264	0/0:25,1:28:46.74:0,47,639	0/1:15,2:20:42.94:43,0,248	1/1:11,8:21:11.42:134,11,0	1/1:10,21:32:60.39:429,60,0	1/1:7,10:17:28.21:208,28,0
chr10	110091461	.	GGGGTGTGTGGTGGGGCAGGCGGGGTGGCA	G	643.13	PASS	AC=8;AF=0.160;AN=50;BaseQRankSum=1.969;DP=99;FS=15.330;HRun=0;HaplotypeScore=79.9523;InbreedingCoeff=0.4932;MQ=88.01;MQ0=0;MQRankSum=-1.693;QD=35.73;ReadPosRankSum=1.969;VQSLOD=0.5842;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:3.01:201,3,0	0/0:2,0:2:6.02:0,6,513	0/0:6,0:6:15.05:0,15,988	0/0:5,0:5:12.04:0,12,778	0/0:2,0:2:6.02:0,6,199	0/0:4,0:4:9.03:0,9,771	0/0:2,0:2:6.02:0,6,466	0/0:5,0:5:2.94:0,3,18	0/0:2,0:2:3.01:0,3,73	0/0:3,0:3:9.03:0,9,573	0/0:2,0:2:6.02:0,6,161	0/0:5,0:5:9.03:0,9,720	0/0:4,0:4:9.03:0,9,531	0/0:3,0:3:9.03:0,9,529	0/0:4,0:4:12.04:0,12,886	0/0:4,0:4:9.03:0,9,842	./.	1/1:2,0:2:3.01:222,3,0	1/1:7,0:7:3.01:70,3,0	0/0:2,0:2:0.47:0,0,1	0/0:9,0:9:0.47:0,0,1	0/0:3,0:3:6.02:0,6,245	./.	0/0:3,0:3:9.03:0,9,840	0/0:6,0:6:18.06:0,18,1085	1/1:1,3:4:9.03:267,9,0	0/0:1,4:5:0.47:0,0,1	./.
chr10	110091482	.	GGGGT	G	326.20	PASS	AB=0.500;AC=11;AF=0.229;AN=48;BaseQRankSum=4.129;DP=104;FS=12.423;HRun=0;HaplotypeScore=28.6614;InbreedingCoeff=0.6335;MQ=88.62;MQ0=0;MQRankSum=-2.323;QD=17.17;ReadPosRankSum=-0.365;VQSLOD=0.9740;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:6.02:94,6,0	0/0:2,0:2:6.02:0,6,164	0/0:6,0:6:13.52:0,14,400	0/0:6,0:6:15.05:0,15,327	0/0:4,0:4:9.03:0,9,225	0/0:5,0:5:12.04:0,12,282	0/0:4,0:4:12.03:0,12,236	1/1:0,2:2:6.01:77,6,0	0/0:1,0:1:2.90:0,3,16	0/0:3,0:3:9.03:0,9,238	0/0:1,0:1:3.01:0,3,42	0/0:4,0:4:9.03:0,9,236	0/0:3,0:3:9.03:0,9,212	0/0:5,0:5:15.01:0,15,328	0/0:7,0:7:20.66:0,21,457	0/0:8,0:8:24.08:0,24,615	./.	1/1:1,4:5:6.02:114,6,0	1/1:0,1:1:3.01:52,3,0	./.	0/1:0,6:6:0:0,0,0	./.	0/0:4,0:4:9.03:0,9,224	0/0:8,0:8:24.08:0,24,656	0/0:8,0:8:15.05:0,15,400	1/1:3,0:3:9.01:123,9,0	0/0:4,0:4:0:0,0,0	./.
chr10	110091933	.	CGT	C	2102.83	PASS	AB=0.931;AC=19;AF=0.339;AN=56;BaseQRankSum=2.232;DP=774;FS=0.920;HRun=0;HaplotypeScore=140.6218;InbreedingCoeff=0.2101;MQ=64.11;MQ0=17;MQRankSum=2.065;QD=5.39;ReadPosRankSum=1.981;VQSLOD=3.3476;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:39:23.85:0,24,183	0/1:7,1:8:18.48:18,0,144	0/0:29,0:20:2.99:0,3,23	0/0:26,0:20:5.99:0,6,62	1/1:21,1:23:4.72:210,5,0	1/1:16,5:22:29.05:277,29,0	1/1:23,7:30:37.59:413,38,0	0/0:20,0:20:20.53:0,21,169	1/1:22,13:36:54.38:607,54,0	0/0:30,0:30:10.82:0,11,617	0/0:19,1:19:1.39:0,1,359	0/1:27,1:29:7.70:8,0,552	0/1:26,3:29:99:180,0,327	0/0:26,1:26:14.05:0,14,642	0/1:30,2:32:18.43:18,0,504	0/1:39,4:44:34.96:35,0,890	0/0:25,0:24:7.72:0,8,48	0/0:14,0:14:17.58:0,18,134	0/0:33,0:21:18.86:0,19,122	0/0:19,0:19:5.58:0,6,56	0/0:65,0:62:18.78:0,19,135	0/1:22,1:22:25.77:26,0,384	0/1:14,0:15:24.53:25,0,175	0/1:44,4:50:99:111,0,727	1/1:11,6:21:21.74:348,22,0	0/0:27,0:27:23.81:0,24,188	0/1:3,0:27:0:0,0,0	0/0:1,0:7:3:0,3,26
chr10	110092038	.	TTG	T	161.47	PASS	AB=0.995;AC=17;AF=0.304;AN=56;BaseQRankSum=7.086;DP=643;FS=23.583;HRun=0;HaplotypeScore=130.1292;InbreedingCoeff=0.2678;MQ=57.48;MQ0=16;MQRankSum=0.571;QD=0.58;ReadPosRankSum=1.713;VQSLOD=0.9603;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:29:16.20:16,0,74	0/0:11,0:11:18.04:0,18,261	0/1:21,1:13:17.79:18,0,133	0/0:23,1:13:11.86:0,12,101	0/1:10,0:10:8.45:8,0,28	1/1:17,0:16:1.94:15,2,0	0/1:25,0:25:2.54:3,0,23	0/0:30,0:28:3.70:0,4,20	0/1:13,0:13:8.57:67,0,9	0/0:24,0:24:42.01:0,42,534	0/0:17,0:17:14.20:0,14,384	0/0:33,0:31:59.96:0,60,830	0/0:23,0:23:25.55:0,26,420	0/0:21,0:21:28.33:0,28,308	0/0:27,1:27:30.30:0,30,837	0/0:37,0:37:16.55:0,17,1047	0/1:28,0:26:2.07:2,0,86	0/0:19,0:19:8.57:0,9,81	0/1:15,0:15:5.49:28,0,5	1/1:22,0:22:5.61:31,6,0	1/1:56,0:54:12.69:82,13,0	0/0:22,1:23:15.61:0,16,668	0/0:18,0:18:25.70:0,26,318	0/0:33,2:34:9.84:0,10,808	1/1:12,0:12:7.33:35,7,0	0/0:23,0:23:17.41:0,17,126	0/1:12,0:12:0.33:8,0,0	0/1:12,0:8:5.55:6,0,22
chr10	110092058	.	GTGTA	G	4267.83	PASS	AB=0.972;AC=31;AF=0.554;AN=56;BaseQRankSum=1.345;DP=680;FS=4.583;HRun=0;HaplotypeScore=141.6208;InbreedingCoeff=0.7016;MQ=49.10;MQ0=36;MQRankSum=-2.828;QD=10.26;ReadPosRankSum=-4.056;VQSLOD=2.9187;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,1:25:29.81:248,30,0	0/0:12,0:12:24.07:0,24,488	0/1:16,0:7:5.55:6,0,38	0/1:12,0:5:1.99:2,0,27	0/1:16,1:17:9.85:153,0,10	1/1:24,0:22:38.97:401,39,0	1/1:24,1:23:38.18:341,38,0	1/1:32,0:26:58.45:490,58,0	1/1:23,0:23:32.26:236,32,0	0/0:36,0:26:40.55:0,41,779	0/1:19,0:18:38.41:38,0,521	0/0:33,0:31:63.07:0,63,1098	0/0:19,0:18:15.98:0,16,566	0/0:20,0:19:10.89:0,11,325	0/0:30,0:28:51.02:0,51,1268	0/0:35,0:35:55.21:0,55,1371	1/1:26,0:23:27.86:193,28,0	1/1:20,0:19:20.30:251,20,0	1/1:11,0:7:13.57:87,14,0	1/1:30,0:30:33.44:306,33,0	1/1:56,1:52:57.09:501,57,0	0/0:23,0:23:45.23:0,45,807	0/0:17,0:17:10.05:0,10,401	0/0:39,0:38:81.71:0,82,1197	1/1:15,1:16:24.44:230,24,0	1/1:29,0:27:46.37:386,46,0	1/1:18,1:19:32.01:264,32,0	0/1:10,1:7:1.30:135,0,1
chr10	110092060	.	GTA	G	4562	PASS	AB=0.986;AC=35;AF=0.625;AN=56;BaseQRankSum=3.630;DP=678;FS=3.233;HRun=0;HaplotypeScore=123.1533;InbreedingCoeff=0.6509;MQ=47.97;MQ0=39;MQRankSum=-2.813;QD=9.85;ReadPosRankSum=-3.352;VQSLOD=3.5979;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,2:25:27.44:231,27,0	0/0:13,0:13:27.01:0,27,380	0/1:12,0:5:5.46:5,0,38	0/1:12,0:5:1.68:2,0,39	1/1:18,0:18:13.08:165,13,0	1/1:24,0:22:47.67:378,48,0	1/1:23,0:21:36.93:281,37,0	1/1:31,0:25:61.41:511,61,0	1/1:21,1:22:43.93:409,44,0	0/0:35,0:24:38.05:0,38,536	0/1:19,0:18:23.64:24,0,371	0/0:31,1:30:52.06:0,52,765	0/0:20,0:19:4.94:0,5,442	0/1:18,0:17:3.19:3,0,186	0/1:30,0:28:3.29:3,0,844	0/0:34,1:35:53.79:0,54,982	1/1:26,0:23:8.87:188,9,0	1/1:20,0:19:34.35:214,34,0	1/1:11,1:8:19.66:153,20,0	1/1:27,4:31:41.95:367,42,0	1/1:56,0:51:68.77:599,69,0	0/0:24,0:24:23.43:0,23,621	0/0:17,0:17:2.13:0,2,273	0/0:39,0:38:41.94:0,42,783	1/1:16,1:17:29.97:269,30,0	1/1:30,0:27:49.13:406,49,0	1/1:20,0:20:32.02:243,32,0	1/1:12,0:7:8.39:112,8,0
chr10	110092062	.	ATG	A	242.73	PASS	AB=0.977;AC=21;AF=0.389;AN=54;BaseQRankSum=5.894;DP=693;FS=19.146;HRun=0;HaplotypeScore=144.8181;InbreedingCoeff=-0.0325;MQ=47.62;MQ0=40;MQRankSum=0.952;QD=0.57;ReadPosRankSum=2.937;VQSLOD=1.2901;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:31:15.08:15,0,37	0/0:11,1:12:27.09:0,27,400	./.	0/0:12,0:5:2.99:0,3,23	0/1:18,0:18:3.70:4,0,49	1/1:24,0:22:3.57:18,4,0	0/1:25,0:22:4.16:6,0,4	0/1:31,0:25:10.73:11,0,19	0/1:24,0:24:44.07:57,0,44	0/1:34,1:24:17.22:17,0,461	0/1:18,1:18:25.04:25,0,289	0/0:30,1:30:10.57:0,11,534	0/0:20,0:19:24.10:0,24,400	0/1:15,1:16:28.03:28,0,162	0/1:28,2:29:32.72:33,0,747	0/0:34,0:34:15.50:0,15,635	0/0:30,0:27:0.29:0,0,103	0/0:20,0:19:9.35:0,9,86	0/1:14,0:9:16.66:17,0,24	1/1:31,0:31:5.57:32,6,0	1/1:57,0:52:15.14:85,15,0	0/0:23,0:23:34.47:0,34,464	0/1:17,1:18:10.56:11,0,264	0/0:40,0:39:28.93:0,29,647	1/1:17,0:17:4.75:30,5,0	0/0:29,0:26:18.29:0,18,128	0/1:21,0:21:1.49:8,0,1	0/1:12,0:7:5.52:6,0,22
chr10	110092090	.	GTC	G	1732.97	PASS	AB=0.994;AC=24;AF=0.429;AN=56;BaseQRankSum=10.778;DP=603;FS=2.956;HRun=0;HaplotypeScore=128.8279;InbreedingCoeff=0.1556;MQ=47.41;MQ0=38;MQRankSum=-1.668;QD=4.71;ReadPosRankSum=-4.681;VQSLOD=1.6453;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:35,1:32:38.08:304,38,0	0/0:12,0:12:27.02:0,27,407	0/0:4,0:2:3:0,3,29	0/1:7,0:5:4.31:4,0,43	0/0:24,0:24:9.13:0,9,258	0/1:18,0:16:26.75:27,0,145	0/0:31,0:28:38.06:0,38,367	1/1:16,1:12:1.94:143,2,0	0/0:22,0:22:23.28:0,23,248	0/1:27,2:18:26.53:27,0,573	0/1:19,0:17:31.84:32,0,336	0/0:25,0:24:36.36:0,36,619	0/0:16,0:15:21.48:0,21,463	0/1:13,0:12:28.25:28,0,214	0/0:29,0:27:25.56:0,26,947	0/1:23,0:23:35.19:35,0,750	0/1:31,0:29:38.25:154,0,38	0/1:22,0:21:12.57:150,0,13	1/1:13,0:6:4.09:65,4,0	1/1:22,0:21:20.40:153,20,0	1/1:47,0:41:41.74:384,42,0	0/0:20,0:20:38.84:0,39,560	0/0:19,0:19:22.37:0,22,452	0/0:33,0:32:41.89:0,42,800	0/1:21,0:21:26.22:26,0,174	0/1:29,0:25:12.76:274,0,13	1/1:15,0:15:3.06:61,3,0	1/1:6,0:4:2.85:45,3,0
chr10	110092126	.	CTG	C	961.69	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=11.464;DP=550;FS=10.649;HRun=0;HaplotypeScore=125.6369;InbreedingCoeff=0.4916;MQ=61.86;MQ0=5;MQRankSum=-2.275;QD=4.16;ReadPosRankSum=4.992;VQSLOD=1.9817;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,3:32:45.80:294,46,0	0/1:11,0:11:0.52:1,0,163	0/1:23,0:17:5.07:5,0,222	0/0:29,0:17:25.62:0,26,438	0/0:20,0:20:43.68:0,44,250	0/0:16,0:16:24.58:0,25,175	0/0:30,0:30:42.55:0,43,314	0/1:23,0:23:38.14:73,0,38	0/0:22,0:22:39.58:0,40,291	0/0:10,0:10:24.04:0,24,307	0/0:9,0:9:9.02:0,9,131	0/0:12,0:12:20.88:0,21,272	0/0:13,0:11:23.96:0,24,326	0/0:18,0:17:39.05:0,39,539	0/0:27,0:27:54.45:0,54,724	0/0:24,0:24:43.26:0,43,530	0/1:30,0:29:0.92:153,0,1	1/1:12,1:13:6.53:100,7,0	0/1:10,0:9:12.22:12,0,56	0/1:15,0:14:9.20:55,0,9	1/1:33,0:33:0.50:123,1,0	0/0:21,0:20:27.45:0,27,432	0/0:21,0:21:28.11:0,28,382	0/0:25,0:25:51.14:0,51,696	0/0:21,0:21:40.79:0,41,259	1/1:24,0:24:32.49:206,32,0	1/1:13,0:13:2.57:79,3,0	1/1:4,0:4:7.71:32,8,0
chr10	110092129	.	TGG	T	4238.86	PASS	AB=0.552;AC=22;AF=0.393;AN=56;BaseQRankSum=7.693;DP=573;FS=0.000;HRun=10;HaplotypeScore=117.7938;InbreedingCoeff=0.8427;MQ=62.71;MQ0=5;MQRankSum=-1.245;QD=16.82;ReadPosRankSum=5.798;VQSLOD=2.9628;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,21:33:46.96:548,47,0	0/0:11,0:12:20.50:0,21,205	0/0:20,0:17:15.30:0,15,195	0/0:26,0:17:8.36:0,8,285	0/0:4,0:18:34.26:0,34,117	0/1:4,0:17:0.21:0,0,73	0/1:4,1:29:37.63:38,0,137	1/1:4,22:26:60.09:643,60,0	0/0:4,1:20:15.03:0,15,138	0/0:9,0:9:15.04:0,15,217	0/0:6,0:6:9.02:0,9,122	0/0:19,0:19:43.87:0,44,476	0/0:14,0:12:30.04:0,30,393	0/0:24,0:23:60.02:0,60,739	0/0:30,0:32:57.96:0,58,714	0/0:29,0:30:66.02:0,66,753	1/1:4,26:30:53.18:573,53,0	1/1:1,12:13:30.02:314,30,0	1/1:2,7:9:8.96:155,9,0	1/1:6,11:16:32.75:346,33,0	1/1:12,21:33:57.64:646,58,0	0/0:15,0:17:39.04:0,39,494	0/0:15,0:16:26.20:0,26,306	0/0:32,0:33:64.12:0,64,723	0/0:8,0:18:33.32:0,33,147	1/1:3,21:24:59.89:643,60,0	1/1:1,14:15:20.63:234,21,0	1/1:0,4:4:9.02:100,9,0
chr10	110092796	.	CTCTG	C	4462.68	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=8.632;DP=459;FS=15.927;HRun=0;HaplotypeScore=97.3692;InbreedingCoeff=0.9932;MQ=91.51;MQ0=0;MQRankSum=-8.037;QD=26.72;ReadPosRankSum=-1.957;VQSLOD=3.2403;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,4:21:35.99:455,36,0	0/0:7,0:7:21.07:0,21,537	0/0:32,0:31:56.71:0,57,1042	0/0:31,0:27:16.55:0,17,714	0/0:19,0:19:48.09:0,48,1012	0/0:19,0:19:45.14:0,45,1102	0/0:13,0:13:33:0,33,718	1/1:4,19:23:63.01:719,63,0	0/0:10,0:10:27.09:0,27,675	0/0:19,0:19:54.17:0,54,1209	0/0:13,0:13:30.09:0,30,705	0/0:15,0:15:42.13:0,42,996	0/0:16,0:16:30.06:0,30,661	0/0:14,0:14:33.09:0,33,715	0/0:22,0:21:51.15:0,51,1190	0/0:18,0:18:51.13:0,51,1092	1/1:22,4:26:57.03:754,57,0	1/1:16,1:16:18.04:274,18,0	1/1:11,4:15:42.03:524,42,0	1/1:4,6:10:21.01:286,21,0	1/1:9,3:11:20.94:220,21,0	0/0:8,0:8:24.07:0,24,563	0/0:8,0:8:20.96:0,21,374	0/0:9,0:9:24.08:0,24,615	0/0:18,0:17:45.14:0,45,1089	1/1:14,4:18:39.06:542,39,0	1/1:5,7:12:24.04:341,24,0	1/1:10,3:13:29.99:346,30,0
chr10	110092812	.	G	GGA	3014.90	PASS	AB=0.823;AC=15;AF=0.268;AN=56;BaseQRankSum=12.923;DP=466;FS=18.011;HRun=0;HaplotypeScore=95.8390;InbreedingCoeff=0.5369;MQ=72.03;MQ0=2;MQRankSum=-8.920;QD=16.66;ReadPosRankSum=0.426;VQSLOD=2.4828;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,8:21:30.06:294,30,0	0/0:9,0:9:24.08:0,24,382	0/0:28,0:19:41.80:0,42,594	0/0:26,0:21:16.62:0,17,571	0/0:19,0:19:54.18:0,54,877	0/0:23,0:23:60.19:0,60,954	0/0:13,0:13:33.11:0,33,513	0/1:25,3:27:28.46:258,0,28	0/0:13,0:13:36.12:0,36,583	0/0:22,0:22:63.21:0,63,1006	0/0:11,0:11:33.11:0,33,534	0/0:15,0:15:45.15:0,45,718	0/0:10,0:10:27.09:0,27,439	0/0:12,0:12:33.10:0,33,512	0/0:16,0:15:48.16:0,48,779	0/0:17,0:17:51.15:0,51,761	1/1:16,13:28:45:795,45,0	1/1:13,5:17:17.35:215,17,0	0/1:13,4:16:97.57:220,0,98	1/1:9,3:12:19.75:253,20,0	0/1:8,1:8:46.80:52,0,47	0/0:9,0:9:24.08:0,24,389	0/0:6,0:6:15.05:0,15,245	0/0:11,0:11:30.57:0,31,490	0/0:23,0:22:51.17:0,51,826	0/1:11,8:19:33.60:493,0,34	0/1:12,4:15:20.87:271,0,21	1/1:3,8:11:20.09:351,20,0
chr10	110092818	.	AT	A	186.58	PASS	AB=0.859;AC=5;AF=0.089;AN=56;BaseQRankSum=-1.955;DP=477;FS=1.910;HRun=15;HaplotypeScore=104.6906;InbreedingCoeff=0.3368;MQ=63.39;MQ0=6;MQRankSum=2.173;QD=3.22;ReadPosRankSum=2.243;VQSLOD=0.8555;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:28:23.65:0,24,144	0/0:8,0:8:20.99:0,21,181	0/0:24,0:14:12.23:0,12,80	0/0:21,0:16:15.20:0,15,87	0/0:16,1:18:22.58:0,23,309	0/0:23,1:24:50.95:0,51,441	0/0:12,0:11:14.92:0,15,123	0/0:27,0:26:45.08:0,45,238	0/1:10,2:11:20.57:21,0,79	0/0:22,0:23:41.82:0,42,352	0/1:11,2:14:5.75:6,0,185	0/0:13,1:14:13.72:0,14,241	0/0:11,0:11:23.91:0,24,198	0/0:13,0:13:23.96:0,24,204	0/0:12,0:12:23.83:0,24,196	0/0:15,0:15:37.73:0,38,302	0/0:28,0:32:55.97:0,56,308	0/0:10,0:19:22.04:0,22,114	0/0:20,0:19:20.59:0,21,87	0/0:13,0:14:17.93:0,18,106	0/0:11,0:9:3.37:0,3,17	0/0:8,0:8:12:0,12,105	0/0:5,0:5:9:0,9,79	0/1:9,2:11:1.27:1,0,114	1/1:4,17:20:41.32:269,41,0	0/0:22,0:23:49.52:0,50,289	0/0:16,0:16:28.65:0,29,162	0/0:12,0:12:17.37:0,17,119
chr10	110093160	.	TTTTTTG	T	2022.48	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=9.787;DP=396;FS=0.898;HRun=0;HaplotypeScore=118.4368;InbreedingCoeff=0.7990;MQ=46.43;MQ0=3;MQRankSum=-4.829;QD=14.34;ReadPosRankSum=1.305;VQSLOD=2.7012;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:25:1.57:255,2,0	0/0:7,0:7:21.07:0,21,461	0/0:13,0:5:11.98:0,12,163	0/0:9,0:5:11.88:0,12,86	0/0:16,0:16:40.62:0,41,559	0/0:12,0:12:35.96:0,36,622	0/0:26,0:26:54.15:0,54,1077	1/1:18,0:17:21.47:257,21,0	0/0:12,0:12:36.10:0,36,602	0/0:19,0:18:54.17:0,54,881	0/0:15,0:14:38.98:0,39,616	0/0:9,0:9:23.92:0,24,339	0/0:10,0:10:13.78:0,14,372	0/0:21,0:20:59.84:0,60,883	0/0:22,0:22:61.61:0,62,1011	0/0:21,0:21:52.39:0,52,976	1/1:12,4:16:4.13:382,4,0	1/1:8,0:8:19.13:164,19,0	1/1:21,0:20:26.56:366,27,0	0/1:10,0:9:2.12:25,0,2	0/1:5,0:4:6.23:33,0,6	0/0:8,0:8:24.08:0,24,412	0/0:10,0:10:27:0,27,408	0/0:10,0:9:18:0,18,316	0/0:15,0:14:29.25:0,29,479	1/1:17,0:17:30.55:378,31,0	1/1:12,2:13:10.41:210,10,0	1/1:6,0:6:14.55:147,15,0
chr10	110093170	.	CT	C	1765.49	PASS	AC=22;AF=0.407;AN=54;BaseQRankSum=7.983;DP=350;FS=0.521;HRun=8;HaplotypeScore=81.7082;InbreedingCoeff=0.9106;MQ=40.79;MQ0=3;MQRankSum=-3.354;QD=13.48;ReadPosRankSum=4.585;VQSLOD=3.3314;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:24:35.50:313,36,0	0/0:7,0:7:20.08:0,20,208	1/1:8,0:3:2.94:18,3,0	./.	0/0:14,0:14:17.28:0,17,171	0/0:11,0:11:30.08:0,30,351	0/0:25,1:26:23.08:0,23,518	1/1:6,9:15:27.02:256,27,0	0/0:11,0:11:16.05:0,16,138	0/0:19,0:18:30.56:0,31,362	0/0:10,0:9:19.74:0,20,205	0/0:9,0:9:21.04:0,21,231	0/0:7,0:7:18.06:0,18,217	0/0:21,0:21:47.95:0,48,502	0/0:21,0:21:40.49:0,40,414	0/0:20,0:20:44.54:0,45,486	1/1:7,8:15:23.25:230,23,0	1/1:4,8:12:19.57:158,20,0	1/1:2,14:15:39.03:360,39,0	1/1:2,6:7:9:84,9,0	1/1:0,4:4:3:28,3,0	0/0:6,0:6:12.51:0,13,145	0/0:10,0:10:24.07:0,24,290	0/0:9,0:8:12.64:0,13,99	0/0:13,0:13:17.95:0,18,197	1/1:2,12:14:13.53:310,14,0	1/1:4,6:10:14.22:108,14,0	1/1:0,5:5:12.01:109,12,0
chr10	110098242	.	G	GAGA	15512.21	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-17.414;DP=749;FS=1.643;HRun=0;HaplotypeScore=100.0877;InbreedingCoeff=0.9906;MQ=85.29;MQ0=0;MQRankSum=-6.457;QD=51.36;ReadPosRankSum=0.300;VQSLOD=6.6050;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,43:51:99:2581,117,0	0/0:4,0:4:9.01:0,9,119	0/0:31,0:31:84.26:0,84,1280	0/0:19,0:19:45.15:0,45,710	0/0:18,0:18:45.15:0,45,723	0/0:20,0:19:57.19:0,57,916	0/0:23,0:23:63.20:0,63,986	1/1:11,25:38:90.28:1841,90,0	0/0:28,0:28:78.27:0,78,1254	0/0:28,0:28:75.24:0,75,1145	0/0:9,0:9:23.95:0,24,339	0/0:36,0:36:99:0,102,1639	0/0:36,0:36:99:0,102,1614	0/0:31,0:31:90.31:0,90,1446	0/0:40,0:40:99:0,117,1877	0/0:30,0:30:84.26:0,84,1324	1/1:5,31:36:78.74:1722,79,0	1/1:3,35:38:99:2252,102,0	1/1:6,17:24:60.21:1271,60,0	1/1:3,12:16:39.05:768,39,0	1/1:4,28:34:72.25:1589,72,0	0/0:12,0:12:27.07:0,27,411	0/0:32,0:32:81.14:0,81,1255	0/0:27,0:27:75.26:0,75,1202	0/0:23,0:23:57.18:0,57,888	1/1:5,28:35:48.07:1879,48,0	1/1:5,16:21:51.14:1079,51,0	1/1:1,8:9:24.08:530,24,0
chr10	110157946	.	T	TAC	190.90	PASS	AB=0.926;AC=13;AF=0.342;AN=38;BaseQRankSum=-2.178;DP=348;FS=0.000;HRun=0;HaplotypeScore=105.7046;InbreedingCoeff=0.0280;MQ=51.52;MQ0=17;MQRankSum=0.858;QD=1.38;ReadPosRankSum=0.286;VQSLOD=1.5989;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:16:2.84:0,3,14	./.	./.	0/0:24,0:9:0:0,0,0	0/0:8,0:10:2.84:0,3,14	0/0:8,0:10:5.59:0,6,26	1/1:10,0:11:0.20:14,0,0	./.	0/0:6,0:10:5.64:0,6,28	./.	0/0:5,0:6:2.84:0,3,14	0/1:18,1:19:7.32:117,0,7	1/1:12,0:12:2:19,2,0	0/0:11,0:11:0.89:0,1,2	0/1:18,2:19:34.44:34,0,54	0/0:11,0:15:8.69:0,9,59	0/1:5,0:7:8.10:15,0,8	1/1:8,0:8:2.94:18,3,0	./.	./.	0/1:18,0:18:0:1,0,0	0/1:8,2:10:13.65:37,0,14	./.	0/1:15,4:15:25.49:38,0,25	./.	0/1:13,0:11:0:0,0,0	0/0:9,0:10:0.43:0,0,1	./.
chr10	110159100	.	CCTCTG	C	11355.46	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.480;DP=653;FS=17.566;HRun=0;HaplotypeScore=125.1172;InbreedingCoeff=0.9979;MQ=83.55;MQ0=0;MQRankSum=-7.288;QD=39.57;ReadPosRankSum=4.950;VQSLOD=3.4686;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:35:72.25:1511,72,0	0/0:9,0:9:24.08:0,24,697	0/0:25,0:25:69.22:0,69,2029	0/0:24,0:24:60.15:0,60,1576	0/0:20,0:20:54.15:0,54,1533	0/0:16,0:16:45.15:0,45,1394	0/0:27,0:27:63.22:0,63,1918	1/1:11,22:33:66.17:1189,66,0	1/1:3,14:17:33.11:693,33,0	0/0:25,0:25:75.26:0,75,2282	0/0:9,0:9:21.06:0,21,632	0/0:31,0:31:93.31:0,93,2757	0/0:18,0:18:51.18:0,51,1523	0/0:25,0:25:72.23:0,72,2161	0/0:36,0:36:99:0,105,3254	0/0:32,0:32:33.34:0,33,2821	1/1:3,42:45:96.33:2015,96,0	1/1:4,20:24:42.14:882,42,0	1/1:1,13:14:39.08:719,39,0	1/1:3,11:14:18.53:378,19,0	1/1:5,40:45:59.34:1258,59,0	0/0:18,0:18:54.19:0,54,1637	0/0:11,0:11:33.11:0,33,993	0/0:25,0:25:75.26:0,75,2236	0/0:15,0:15:36.10:0,36,992	1/1:2,16:18:48.15:948,48,0	1/1:2,24:26:54.19:1133,54,0	1/1:0,16:16:30.10:629,30,0
chr10	110159205	.	A	AACC	1208.63	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.662;DP=638;FS=0.731;HRun=0;HaplotypeScore=118.9320;InbreedingCoeff=0.9837;MQ=87.16;MQ0=1;MQRankSum=-7.764;QD=40.29;ReadPosRankSum=-0.863;VQSLOD=4.5394;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,2346	0/0:10,0:10:30.10:0,30,558	0/0:23,0:23:63.08:0,63,1129	0/0:27,0:27:78.26:0,78,1390	1/1:0,7:8:19.04:133,19,0	1/1:1,10:12:31.66:654,32,0	1/1:1,4:5:12.04:258,12,0	0/0:32,0:32:96.28:0,96,1705	0/0:21,0:21:63.22:0,63,1161	0/0:25,0:25:75.26:0,75,1386	0/0:7,0:7:21.07:0,21,390	0/0:30,0:30:87.30:0,87,1613	0/0:14,0:14:42.14:0,42,780	0/0:22,0:22:66.23:0,66,1230	0/0:32,0:32:93.32:0,93,1726	0/0:22,0:22:66.23:0,66,1227	0/0:41,0:41:99:0,120,2161	0/0:24,0:24:69.18:0,69,1200	0/0:17,0:17:48.15:0,48,856	0/0:20,0:20:57.20:0,57,1059	0/0:57,0:57:99:0,166,2932	0/0:19,0:19:57.13:0,57,963	0/0:19,0:18:51.17:0,51,950	0/0:34,0:34:96.33:0,96,1789	1/1:0,4:5:15.05:319,15,0	0/0:24,0:24:72.25:0,72,1335	0/0:19,0:19:57.18:0,57,1023	0/0:24,0:24:60.19:0,60,1084
chr10	110159207	.	T	TAACCCTAACCCTAACCC	4579.61	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.603;DP=641;FS=2.527;HRun=0;HaplotypeScore=288.9536;InbreedingCoeff=0.9843;MQ=87.05;MQ0=1;MQRankSum=-7.486;QD=143.11;ReadPosRankSum=-0.204;VQSLOD=4.5249;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,5730	0/0:10,0:10:30.08:0,30,1406	0/0:24,0:24:69.21:0,69,2633	0/0:26,0:26:75.20:0,75,3301	1/1:3,6:11:20.73:649,21,0	1/1:2,9:11:33.05:2069,33,0	1/1:1,3:5:12.04:889,12,0	0/0:33,0:33:96.32:0,96,3844	0/0:22,0:22:60.21:0,60,2822	0/0:25,0:25:75.25:0,75,3240	0/0:7,0:7:21.06:0,21,858	0/0:30,0:30:90.30:0,90,3652	0/0:14,0:14:42.12:0,42,1893	0/0:22,0:22:66.18:0,66,3033	0/0:32,0:32:96.32:0,96,4239	0/0:22,0:22:66.22:0,66,2929	0/0:39,0:39:99:0,114,5176	0/0:22,0:22:63.20:0,63,2789	0/0:15,0:15:45.10:0,45,1633	0/0:20,0:20:60.16:0,60,2384	0/0:58,0:58:99:0,150,6778	0/0:18,0:18:51.17:0,51,2452	0/0:19,0:18:51.16:0,51,2201	0/0:34,0:34:96.32:0,96,4436	1/1:1,4:5:15.05:973,15,0	0/0:25,0:25:69.21:0,69,2935	0/0:20,0:20:57.16:0,57,2343	0/0:24,0:24:60.21:0,60,2969
chr10	110159209	.	AG	A	555.76	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.394;DP=632;FS=0.000;HRun=1;HaplotypeScore=95.6887;InbreedingCoeff=0.9702;MQ=87.40;MQ0=1;MQRankSum=-4.634;QD=15.44;ReadPosRankSum=-2.575;VQSLOD=2.6136;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,2266	0/0:10,0:10:30.10:0,30,477	0/0:24,0:24:48.85:0,49,904	0/0:26,0:26:60.02:0,60,1077	1/1:0,11:11:8.54:37,9,0	1/1:2,9:11:33.06:334,33,0	1/1:1,4:5:12.01:114,12,0	0/0:35,0:35:99:0,105,1640	0/0:21,0:21:63.21:0,63,1001	0/0:24,0:24:72.23:0,72,1114	0/0:6,0:6:18.06:0,18,288	0/0:30,0:30:90.29:0,90,1409	0/0:13,0:13:39.13:0,39,621	0/0:22,0:22:66.22:0,66,1050	0/0:32,0:32:96.30:0,96,1487	0/0:21,0:21:63.21:0,63,1005	0/0:38,0:38:99:0,111,1770	0/0:22,0:22:63.19:0,63,976	0/0:14,0:14:39.13:0,39,621	0/0:17,0:17:51.16:0,51,791	0/0:60,0:60:99:0,163,2563	0/0:18,0:18:54.18:0,54,860	0/0:18,0:17:48.16:0,48,764	0/0:33,0:33:93.32:0,93,1487	1/1:5,4:9:26.92:223,27,0	0/0:23,0:23:69.24:0,69,1102	0/0:18,0:18:54.18:0,54,861	0/0:22,0:22:60.20:0,60,959
chr10	110160238	.	A	AC	3555.43	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-0.270;DP=667;FS=3.845;HRun=3;HaplotypeScore=274.8160;InbreedingCoeff=0.9776;MQ=55.04;MQ0=0;MQRankSum=-3.419;QD=33.23;ReadPosRankSum=-0.852;VQSLOD=2.0895;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:90.22:0,90,1078	0/0:14,0:14:30.09:0,30,356	0/0:9,0:9:21.06:0,21,251	0/0:9,0:9:8.32:0,8,232	1/1:3,17:20:36.12:503,36,0	1/1:2,19:21:54.18:749,54,0	1/1:7,33:40:99:1383,99,0	0/0:26,0:26:69.21:0,69,822	0/0:26,0:26:72.22:0,72,863	0/0:23,0:23:66.20:0,66,791	0/0:13,0:13:30.06:0,30,348	0/0:42,0:42:99:0,117,1387	0/0:32,0:32:78.20:0,78,919	0/0:40,0:40:99:0,108,1294	0/0:31,0:31:78.24:0,78,934	0/0:22,0:22:66.20:0,66,790	0/0:30,0:30:66.20:0,66,791	0/0:25,0:25:66.20:0,66,792	0/0:8,0:8:21.05:0,21,241	0/0:11,0:11:30.09:0,30,359	0/0:42,0:42:80.56:0,81,958	0/0:15,0:15:39.12:0,39,467	0/0:9,0:9:21.06:0,21,251	0/0:38,0:38:60.15:0,60,707	1/1:2,24:26:66.22:921,66,0	0/0:25,0:25:69.21:0,69,827	0/0:21,0:19:60.18:0,60,718	0/0:10,0:10:30.09:0,30,360
chr10	110160359	.	G	GA	30223.52	PASS	AB=0.777;AC=54;AF=0.964;AN=56;BaseQRankSum=-3.794;DP=768;FS=0.000;HRun=1;HaplotypeScore=142.8253;InbreedingCoeff=-0.0369;MQ=73.08;MQ0=0;MQRankSum=-3.785;QD=39.35;ReadPosRankSum=1.548;VQSLOD=4.3953;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,51:54:99:2086,141,0	1/1:1,14:15:42.14:623,42,0	0/1:9,4:13:21.57:165,0,22	0/1:11,3:15:38.36:74,0,38	1/1:0,14:14:42.14:630,42,0	1/1:1,20:21:57.16:828,57,0	1/1:0,33:33:99:1483,99,0	1/1:5,27:32:90.30:1346,90,0	1/1:0,31:31:84.28:1257,84,0	1/1:2,23:25:75.21:1099,75,0	1/1:1,13:14:42.10:604,42,0	1/1:1,38:39:99:1572,105,0	1/1:0,30:30:87.21:1251,87,0	1/1:2,34:36:99:1483,99,0	1/1:0,30:30:90.30:1347,90,0	1/1:0,31:31:84.28:1259,84,0	1/1:2,32:34:90.27:1325,90,0	1/1:1,22:23:60.20:894,60,0	1/1:0,15:15:45.13:653,45,0	1/1:1,17:17:45.15:675,45,0	1/1:2,68:70:99:2828,190,0	1/1:0,25:25:69.23:1034,69,0	1/1:0,20:20:57.18:829,57,0	1/1:2,46:48:99:1773,120,0	1/1:0,23:23:66.22:989,66,0	1/1:0,22:22:63.19:905,63,0	1/1:0,16:16:48.16:719,48,0	1/1:0,21:21:33.11:495,33,0
chr10	110171262	.	AAAAAG	A	6221.56	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-14.283;DP=681;FS=1.775;HRun=0;HaplotypeScore=210.5848;InbreedingCoeff=0.9966;MQ=73.06;MQ0=1;MQRankSum=-3.075;QD=44.76;ReadPosRankSum=3.372;VQSLOD=5.1273;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:83.90:0,84,1336	0/0:5,0:5:15.05:0,15,222	0/0:30,0:23:59.31:0,59,1030	0/0:34,0:27:62.64:0,63,1099	0/0:32,0:32:96.31:0,96,1437	0/0:22,0:22:63.14:0,63,948	0/0:16,0:16:42.14:0,42,633	0/0:32,0:32:87.23:0,87,1176	0/0:17,0:17:47.29:0,47,717	0/0:31,0:31:85.73:0,86,1086	0/0:19,0:19:51.15:0,51,707	1/1:1,23:24:45.15:946,45,0	1/1:0,18:18:39.12:820,39,0	1/1:1,20:21:45.15:946,45,0	1/1:1,28:29:66.23:1388,66,0	0/0:16,0:16:45.14:0,45,625	0/0:35,0:35:93.25:0,93,1308	0/0:39,0:39:99:0,102,1514	0/0:21,0:21:60.01:0,60,823	0/0:33,0:33:64.65:0,65,1221	0/0:19,0:19:51.64:0,52,738	1/1:3,17:20:45.15:867,45,0	1/1:0,15:15:35.95:750,36,0	1/1:1,11:12:23.71:504,24,0	0/0:27,0:27:79.51:0,80,1128	0/0:38,0:38:99:0,108,1503	0/0:29,0:28:75.19:0,75,1100	0/0:12,0:12:29.98:0,30,463
chr10	110171414	.	AT	A	19552.02	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.238;DP=632;FS=0.000;HRun=3;HaplotypeScore=141.2648;InbreedingCoeff=0.9717;MQ=63.68;MQ0=0;MQRankSum=-6.367;QD=31.84;ReadPosRankSum=3.387;VQSLOD=3.8886;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,20:37:96.16:1117,96,0	1/1:5,7:12:36.11:443,36,0	0/0:8,0:7:14.73:0,15,123	0/0:10,0:10:18.86:0,19,185	1/1:16,8:24:72.16:844,72,0	1/1:12,11:23:63.20:775,63,0	1/1:0,15:15:44.89:491,45,0	1/1:8,23:31:84.21:967,84,0	1/1:12,4:16:48.11:554,48,0	1/1:18,15:32:93.27:1117,93,0	1/1:19,10:29:81.12:936,81,0	1/1:19,11:30:78.23:946,78,0	1/1:13,4:17:48.12:562,48,0	1/1:9,9:18:51.16:624,51,0	1/1:11,10:21:60.19:737,60,0	1/1:13,7:20:57.07:666,57,0	1/1:25,5:30:69.15:797,69,0	1/1:20,10:30:69.13:807,69,0	1/1:11,11:21:57.15:674,57,0	1/1:23,10:33:96.15:1107,96,0	1/1:12,3:15:32.88:320,33,0	1/1:16,15:31:90.15:1028,90,0	1/1:13,10:23:66.16:795,66,0	1/1:14,6:20:42.06:462,42,0	1/1:16,5:21:63.17:746,63,0	1/1:11,18:29:84.17:957,84,0	1/1:12,17:29:78.23:947,78,0	1/1:3,1:4:12.02:134,12,0
chr10	110171421	.	C	CA	23575.78	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.255;DP=669;FS=0.000;HRun=2;HaplotypeScore=136.8625;InbreedingCoeff=0.9273;MQ=61.99;MQ0=0;MQRankSum=-4.438;QD=36.10;ReadPosRankSum=3.072;VQSLOD=4.2720;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,17:40:93.27:1308,93,0	1/1:8,5:13:33.08:451,33,0	0/0:7,0:7:5.20:0,5,29	0/0:7,0:8:16.72:0,17,99	1/1:17,7:24:69.23:985,69,0	1/1:12,11:23:57.12:791,57,0	1/1:1,16:17:48.11:647,48,0	1/1:6,27:33:81.27:1147,81,0	1/1:10,8:18:51.17:732,51,0	1/1:17,16:32:93.31:1322,93,0	1/1:17,13:30:81.27:1158,81,0	1/1:18,10:28:72.23:1012,72,0	1/1:11,6:17:48.16:683,48,0	1/1:10,9:19:54.14:747,54,0	1/1:14,12:26:69.18:948,69,0	1/1:14,6:20:57.19:817,57,0	1/1:22,9:31:66.22:947,66,0	1/1:22,8:30:60.20:861,60,0	1/1:13,13:25:63.17:879,63,0	1/1:23,12:35:99:1474,105,0	1/1:9,8:17:36.11:500,36,0	1/1:16,14:30:78.06:1009,78,0	1/1:15,10:25:46.22:856,46,0	1/1:11,9:20:45.13:624,45,0	1/1:14,9:23:66.21:931,66,0	1/1:10,19:29:81.26:1130,81,0	1/1:17,17:34:90.10:1184,90,0	1/1:3,8:11:30.10:432,30,0
chr10	110173253	.	TA	T	1564.84	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=10.578;DP=518;FS=24.696;HRun=1;HaplotypeScore=95.3207;InbreedingCoeff=0.5643;MQ=68.56;MQ0=10;MQRankSum=-10.511;QD=11.02;ReadPosRankSum=-3.555;VQSLOD=-0.2138;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:25.97:0,26,379	0/0:8,0:8:17.71:0,18,187	0/0:45,2:18:24.38:0,24,243	0/0:60,7:23:45.20:0,45,518	1/1:22,15:36:90.03:773,90,0	1/1:5,4:9:23.87:201,24,0	1/1:6,7:12:9.14:182,9,0	0/1:25,0:25:21.70:22,0,583	0/0:9,0:9:16.04:0,16,285	0/0:18,0:18:16.75:0,17,502	0/0:22,0:22:49.46:0,49,674	0/1:14,0:14:21.04:21,0,226	0/0:11,1:12:2.28:0,2,276	0/1:18,0:18:6.75:7,0,337	0/0:10,0:10:12.26:0,12,229	0/0:13,0:12:8.84:0,9,224	0/0:14,0:13:5.78:0,6,41	0/0:9,0:9:23.99:0,24,265	0/0:22,0:22:36.21:0,36,667	0/0:18,0:18:35.49:0,35,498	0/0:2,0:2:6.01:0,6,63	0/0:7,0:7:21.04:0,21,236	0/0:25,0:25:38.68:0,39,725	0/0:3,0:3:9.01:0,9,100	1/1:16,10:26:66.90:524,67,0	0/0:20,0:20:41.12:0,41,546	0/0:15,0:15:45.02:0,45,488	0/0:17,0:17:42.12:0,42,514
chr10	110173254	.	ATTTTTTTC	A	383.26	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=1.445;DP=531;FS=1.126;HRun=0;HaplotypeScore=160.2363;InbreedingCoeff=0.6244;MQ=67.67;MQ0=13;MQRankSum=-1.058;QD=4.51;ReadPosRankSum=-1.535;VQSLOD=2.6457;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:29.08:0,29,997	0/0:8,0:8:15.05:0,15,628	0/0:53,0:18:25.99:0,26,422	0/1:69,0:23:0.34:0,0,667	0/0:38,0:37:92.24:0,92,1657	0/0:10,0:10:25.28:0,25,433	0/0:13,0:12:24.07:0,24,556	0/0:25,0:24:43.10:0,43,1335	0/0:9,0:9:23.99:0,24,632	0/0:18,0:18:54.17:0,54,1656	0/0:22,0:22:60.20:0,60,2073	0/0:14,0:14:23.97:0,24,867	0/0:12,0:12:33.11:0,33,1185	0/0:19,0:19:51.16:0,51,1729	0/0:10,0:10:30.10:0,30,1099	0/0:13,0:12:30.10:0,30,1178	1/1:2,13:14:18.06:473,18,0	0/0:9,0:9:18.06:0,18,548	0/0:22,0:22:51.49:0,51,1475	0/0:17,0:17:45.15:0,45,1367	0/0:1,0:1:3.01:0,3,99	0/0:7,0:7:15.05:0,15,576	0/0:25,0:25:72.15:0,72,2323	0/0:3,0:3:9.03:0,9,377	0/0:26,0:26:73.48:0,73,1472	0/0:22,0:22:45.13:0,45,1299	0/0:16,0:16:21.13:0,21,995	0/0:18,0:18:39.07:0,39,1209
chr10	110173991	.	GGAA	G	751.26	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=2.190;DP=364;FS=1.440;HRun=0;HaplotypeScore=50.5773;InbreedingCoeff=0.7729;MQ=72.72;MQ0=6;MQRankSum=-1.082;QD=10.15;ReadPosRankSum=3.617;VQSLOD=2.1328;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:52.26:0,52,701	0/0:4,0:4:9.02:0,9,151	0/0:33,0:12:25.82:0,26,244	0/1:26,0:12:11.11:11,0,156	1/1:7,0:11:22.55:217,23,0	1/1:9,3:15:33.59:377,34,0	1/1:8,0:10:26.70:250,27,0	0/0:28,0:27:66.44:0,66,833	0/0:7,0:7:21.01:0,21,268	0/0:12,0:12:29.65:0,30,331	0/0:13,0:13:38.96:0,39,450	0/0:20,0:20:57.07:0,57,781	0/0:7,0:7:21.03:0,21,258	0/0:9,0:9:24.03:0,24,309	0/0:13,0:13:27.95:0,28,397	0/0:9,0:9:23.98:0,24,277	0/0:14,0:14:41.95:0,42,481	0/0:13,0:13:33.05:0,33,464	0/0:19,0:18:38.37:0,38,513	0/0:15,0:15:36.46:0,36,549	0/0:8,0:8:18.02:0,18,220	0/0:2,0:2:6.02:0,6,93	0/0:6,0:6:13.76:0,14,131	0/0:7,0:7:16.24:0,16,195	1/1:0,11:12:3.01:50,3,0	0/0:11,0:11:31.84:0,32,330	0/0:15,0:15:42.90:0,43,552	0/0:6,0:6:15.05:0,15,256
chr10	110175505	.	TC	T	2716.99	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.051;DP=507;FS=0.931;HRun=4;HaplotypeScore=50.7697;InbreedingCoeff=0.9895;MQ=78.45;MQ0=0;MQRankSum=-0.946;QD=27.72;ReadPosRankSum=3.266;VQSLOD=2.8770;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.25:0,81,1125	0/0:5,0:5:15.05:0,15,210	0/0:12,0:12:27.09:0,27,371	0/0:17,0:17:42.82:0,43,552	1/1:2,20:22:54.16:645,54,0	1/1:1,27:28:72.22:864,72,0	1/1:1,25:26:51.16:612,51,0	0/0:21,0:21:51.16:0,51,700	0/0:6,0:6:18.06:0,18,251	0/0:21,0:21:60.19:0,60,817	0/0:18,0:18:51.16:0,51,697	0/0:14,0:14:42.13:0,42,572	0/0:12,0:12:36.12:0,36,504	0/0:7,0:7:18.05:0,18,235	0/0:25,0:25:75.25:0,75,1049	0/0:20,0:20:57.19:0,57,794	0/0:36,0:36:99:0,108,1408	0/0:22,0:22:66.22:0,66,918	0/0:19,0:19:51.17:0,51,713	0/0:16,0:16:48.16:0,48,672	0/0:17,0:17:51.16:0,51,697	0/0:7,0:7:21.06:0,21,277	0/0:10,0:10:30.10:0,30,420	0/0:18,0:18:51.17:0,51,711	1/1:0,22:22:63.19:756,63,0	0/0:22,0:22:66.17:0,66,887	0/0:20,0:20:57.17:0,57,779	0/0:13,0:13:33.11:0,33,462
chr10	110178051	.	A	ATT	2727.72	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.598;DP=685;FS=1.554;HRun=8;HaplotypeScore=98.5057;InbreedingCoeff=0.9933;MQ=77.99;MQ0=0;MQRankSum=-2.068;QD=33.26;ReadPosRankSum=-0.609;VQSLOD=3.4149;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,138,1504	0/0:11,0:11:30.08:0,30,334	0/0:20,0:20:34.21:0,34,343	0/0:13,0:12:16.63:0,17,155	1/1:4,15:20:41.63:600,42,0	1/1:2,18:21:51.17:790,51,0	1/1:3,18:21:45.11:677,45,0	0/0:34,0:36:69.25:0,69,769	0/0:26,0:26:69.12:0,69,740	0/0:30,0:30:87.20:0,87,946	0/0:17,0:17:45.12:0,45,501	0/0:28,0:28:75.14:0,75,813	0/0:24,0:24:66.17:0,66,736	0/0:27,0:27:72.19:0,72,802	0/0:37,0:37:99:0,111,1237	0/0:37,0:36:93.22:0,93,1028	0/0:28,0:28:72.17:0,72,803	0/0:23,0:24:65.84:0,66,681	0/0:30,0:30:75.01:0,75,808	0/0:15,0:15:45.12:0,45,501	0/0:27,0:27:71.98:0,72,792	0/0:17,0:17:48.13:0,48,535	0/0:15,0:15:42.07:0,42,447	0/0:13,0:13:16.22:0,16,348	1/1:2,18:20:57.06:821,57,0	0/0:28,0:28:84.17:0,84,909	0/0:30,0:30:72.18:0,72,802	0/0:15,0:15:42.08:0,42,456
chr10	110178255	.	C	CT	879.31	PASS	AB=0.967;AC=18;AF=0.321;AN=56;BaseQRankSum=-0.449;DP=532;FS=7.393;HRun=16;HaplotypeScore=106.1890;InbreedingCoeff=0.0402;MQ=60.29;MQ0=13;MQRankSum=0.072;QD=2.85;ReadPosRankSum=-3.420;VQSLOD=-0.6253;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,1:25:12.68:116,0,13	0/0:9,0:8:9.17:0,9,58	0/0:33,0:11:5.15:0,5,14	0/1:33,0:14:9.21:9,0,23	0/0:19,0:19:7.30:0,7,19	0/0:24,0:24:21.90:0,22,62	0/0:18,0:18:5.89:0,6,17	0/1:34,4:35:19.26:189,0,19	0/1:11,0:11:9.12:22,0,9	0/0:17,0:17:19.55:0,20,139	0/1:17,1:18:4.65:5,0,79	0/0:12,0:12:10.03:0,10,65	0/1:15,0:16:5.06:5,0,62	0/0:14,0:15:12.20:0,12,75	0/1:18,1:19:33.66:34,0,137	0/0:18,0:16:37.79:0,38,214	0/1:22,0:21:16.24:101,0,16	0/1:8,0:9:5.98:23,0,6	0/1:25,1:24:6:107,0,6	1/1:17,3:21:15.32:88,15,0	1/1:9,2:11:0.73:60,1,0	0/0:12,0:12:22.77:0,23,124	0/0:14,0:14:9.72:0,10,115	0/0:12,0:12:14.03:0,14,72	0/0:20,0:19:13.69:0,14,39	0/1:19,3:22:6.71:137,0,7	1/1:14,3:18:11.37:140,11,0	0/1:17,0:14:3.93:4,0,14
chr10	110178257	.	TTTTTTTTTTTTTTTC	T	3430.89	PASS	AB=0.600;AC=7;AF=0.125;AN=56;BaseQRankSum=7.479;DP=538;FS=0.654;HRun=0;HaplotypeScore=205.6762;InbreedingCoeff=0.8569;MQ=59.60;MQ0=14;MQRankSum=-6.859;QD=42.36;ReadPosRankSum=3.709;VQSLOD=2.9820;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:63.04:0,63,959	0/0:9,0:8:21.06:0,21,933	0/0:33,0:10:22.20:0,22,240	0/0:36,0:14:27.51:0,28,360	1/1:0,19:19:29.96:721,30,0	1/1:4,20:24:36.05:1388,36,0	0/1:6,12:18:5.28:430,0,5	0/0:37,0:34:87.10:0,87,1404	0/0:10,0:10:24.06:0,24,381	0/0:21,0:21:63.14:0,63,2427	0/0:20,0:20:53.98:0,54,2026	0/0:12,0:12:30.10:0,30,1138	0/0:16,0:16:34.35:0,34,1576	0/0:16,0:16:39.10:0,39,1558	0/0:17,0:16:48.16:0,48,2512	0/0:18,0:16:45.14:0,45,2564	0/0:23,0:22:25.52:0,26,637	0/0:9,0:9:24.03:0,24,321	0/0:24,0:21:46.91:0,47,653	0/0:21,0:21:32.92:0,33,517	0/0:12,0:11:24.05:0,24,341	0/0:12,0:12:30.09:0,30,1328	0/0:15,0:15:36.12:0,36,1972	0/0:11,0:11:24.07:0,24,991	1/1:0,20:20:23.43:891,23,0	0/0:22,0:22:51.12:0,51,808	0/0:19,0:19:44.75:0,45,607	0/0:17,0:14:9.50:0,10,173
chr10	110178267	.	TTTTTCTTTTTC	T	5763.52	PASS	AB=0.862;AC=29;AF=0.518;AN=56;BaseQRankSum=5.634;DP=535;FS=11.477;HRun=0;HaplotypeScore=159.7405;InbreedingCoeff=0.7346;MQ=56.45;MQ0=19;MQRankSum=-7.667;QD=17.41;ReadPosRankSum=0.473;VQSLOD=3.4056;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,1:29:57.92:844,58,0	0/0:8,0:7:18.03:0,18,554	0/0:34,0:9:8.84:0,9,78	0/1:44,0:13:21.85:22,0,97	1/1:19,0:19:21.03:266,21,0	1/1:20,0:20:36.12:718,36,0	1/1:14,0:14:12.51:258,13,0	1/1:35,1:33:15.43:386,15,0	1/1:10,0:10:4.68:198,5,0	0/0:23,0:22:46.54:0,47,1531	0/0:20,0:20:41.63:0,42,1247	0/0:14,0:14:28.88:0,29,742	0/0:16,0:16:32.68:0,33,1078	0/0:16,0:15:20.07:0,20,910	0/0:18,0:17:2.23:0,2,1545	0/0:18,0:16:47.97:0,48,1762	1/1:20,1:20:18.12:468,18,0	1/1:6,0:6:16.15:112,16,0	1/1:24,0:21:50.64:531,51,0	1/1:20,0:19:25.40:274,25,0	1/1:10,0:9:18.79:146,19,0	0/0:9,0:9:26.30:0,26,768	0/0:17,0:17:38.93:0,39,1298	0/0:11,0:10:26.86:0,27,710	1/1:20,0:19:23.65:453,24,0	0/1:21,1:22:21.54:465,0,22	1/1:15,3:18:34.46:491,34,0	0/1:7,10:15:5.93:131,0,6
chr10	110178268	.	TTTTC	T	2308.47	PASS	AB=0.991;AC=26;AF=0.464;AN=56;BaseQRankSum=8.513;DP=541;FS=5.944;HRun=0;HaplotypeScore=115.9748;InbreedingCoeff=0.5487;MQ=56.27;MQ0=19;MQRankSum=-6.397;QD=6.95;ReadPosRankSum=-0.963;VQSLOD=2.1958;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:10.93:258,11,0	0/0:8,0:7:17.31:0,17,180	0/0:35,0:9:0.80:0,1,28	0/1:46,0:13:5.42:5,0,68	1/1:19,0:19:17.89:125,18,0	1/1:20,0:20:34.89:344,35,0	1/1:14,0:14:12.90:120,13,0	0/1:33,2:32:33.91:174,0,34	0/1:10,0:10:2.78:88,0,3	0/0:24,0:23:47.51:0,48,684	0/0:20,0:20:40.74:0,41,497	0/0:14,0:14:28.60:0,29,342	0/0:16,0:16:27.51:0,28,404	0/0:17,0:16:18.91:0,19,334	0/0:18,0:17:32.19:0,32,639	0/0:18,0:16:47.99:0,48,715	0/1:21,0:20:19.62:136,0,20	0/1:6,0:6:4.48:76,0,4	1/1:24,0:21:4.19:253,4,0	1/1:19,1:19:19.96:162,20,0	1/1:9,1:9:11.32:90,11,0	0/0:10,0:10:19.05:0,19,348	0/0:18,0:18:41.90:0,42,576	0/0:11,0:10:26.55:0,27,259	1/1:20,0:19:21.65:214,22,0	1/1:22,0:22:7.11:224,7,0	1/1:17,0:17:21.42:194,21,0	0/1:17,0:15:14.05:45,0,14
chr10	110179976	.	A	AT	1452.03	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-7.563;DP=585;FS=1.987;HRun=8;HaplotypeScore=57.7298;InbreedingCoeff=0.8783;MQ=77.30;MQ0=3;MQRankSum=0.083;QD=15.78;ReadPosRankSum=1.164;VQSLOD=3.6754;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.05:0,93,850	0/0:7,0:7:9:0,9,82	0/1:22,0:17:4.27:4,0,117	0/0:22,0:20:35.22:0,35,301	1/1:5,18:23:51.15:589,51,0	1/1:2,12:15:35.94:395,36,0	1/1:5,8:13:12.04:139,12,0	0/0:31,0:30:78.02:0,78,709	0/0:20,0:19:45.01:0,45,412	0/0:23,0:23:66.04:0,66,604	0/0:18,0:18:51.03:0,51,467	0/0:17,0:17:45:0,45,407	0/0:14,0:14:38.98:0,39,347	0/0:17,0:17:42:0,42,379	0/0:28,1:29:46.41:0,46,671	0/0:27,0:27:75.04:0,75,686	0/0:45,0:45:99:0,117,1045	0/0:16,0:16:39.02:0,39,357	0/0:18,0:18:50.99:0,51,452	0/0:24,0:24:62.99:0,63,566	0/0:12,0:12:30.02:0,30,275	0/0:13,0:13:35.97:0,36,318	0/0:15,0:15:42.02:0,42,384	0/0:26,0:26:72:0,72,647	1/1:4,15:19:42.12:485,42,0	0/0:27,0:27:72.04:0,72,659	0/0:25,0:25:66.02:0,66,599	0/0:14,0:14:36.02:0,36,329
chr10	110180080	.	AC	A	1799.45	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.469;DP=466;FS=1.606;HRun=9;HaplotypeScore=100.0119;InbreedingCoeff=0.8332;MQ=64.14;MQ0=9;MQRankSum=-6.878;QD=23.37;ReadPosRankSum=-2.569;VQSLOD=2.7644;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:77.93:0,78,854	0/0:5,0:5:15.04:0,15,173	0/0:27,0:9:3.66:0,4,54	0/0:19,0:8:2.69:0,3,58	1/1:6,20:26:71.94:646,72,0	1/1:8,10:18:48:433,48,0	1/1:0,10:10:30.02:274,30,0	0/0:17,0:16:36.09:0,36,404	0/0:12,0:12:33.03:0,33,360	0/0:14,0:14:30.09:0,30,346	0/0:21,0:21:57.13:0,57,636	0/0:16,0:16:39.12:0,39,450	0/0:9,0:9:24.06:0,24,266	0/0:6,0:6:15.03:0,15,164	0/0:7,0:7:18.05:0,18,208	0/0:12,0:12:30.08:0,30,338	0/0:37,0:38:99:0,100,1099	0/0:17,0:17:42.12:0,42,484	0/0:15,1:15:2.66:0,3,272	0/0:24,0:24:35.77:0,36,659	0/0:14,0:14:30:0,30,328	0/0:8,0:8:24.07:0,24,277	0/0:11,0:11:30.07:0,30,335	0/0:14,0:14:42.08:0,42,466	1/1:2,21:23:66.03:603,66,0	0/0:17,0:17:42.12:0,42,485	0/0:29,0:29:72.18:0,72,807	0/0:2,0:2:6.02:0,6,69
chr10	110180097	.	ATTT	A	9430.69	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=11.730;DP=407;FS=3.849;HRun=8;HaplotypeScore=92.2862;InbreedingCoeff=0.9865;MQ=64.83;MQ0=5;MQRankSum=-5.289;QD=36.13;ReadPosRankSum=1.373;VQSLOD=4.3264;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:75.25:1092,75,0	0/0:5,0:5:15.05:0,15,326	0/0:25,0:11:27.09:0,27,420	0/0:12,0:8:14.52:0,15,197	1/1:3,19:22:51.12:713,51,0	1/1:0,13:13:39.13:574,39,0	1/1:2,9:10:24.08:354,24,0	1/1:4,7:11:21.04:288,21,0	1/1:1,9:10:27.09:396,27,0	0/0:11,0:11:33.11:0,33,683	0/0:19,0:19:54.19:0,54,1177	0/0:12,0:12:36.12:0,36,786	0/0:8,0:8:24.08:0,24,524	0/0:7,0:7:18.06:0,18,391	0/0:8,0:8:24.08:0,24,521	0/0:9,0:10:30.10:0,30,647	1/1:1,35:36:99:1438,99,0	1/1:3,11:14:27.09:398,27,0	1/1:1,14:15:42.13:602,42,0	1/1:0,20:20:60.20:880,60,0	1/1:3,9:12:24.08:354,24,0	0/0:6,0:6:18.06:0,18,393	0/0:11,0:11:30.10:0,30,654	0/0:10,0:10:27.09:0,27,563	1/1:6,17:23:54.17:796,54,0	1/1:2,14:16:42.09:574,42,0	1/1:6,17:24:54.17:796,54,0	1/1:0,4:4:12.04:177,12,0
chr10	110180340	.	TA	T	7140.22	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=11.879;DP=489;FS=5.018;HRun=9;HaplotypeScore=47.1115;InbreedingCoeff=0.9635;MQ=63.25;MQ0=0;MQRankSum=-1.905;QD=23.57;ReadPosRankSum=1.735;VQSLOD=5.6861;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:63.03:577,63,0	0/0:12,0:12:33.10:0,33,381	0/0:5,0:3:3.67:0,4,53	0/0:6,0:4:8.56:0,9,61	1/1:3,22:25:31.47:542,31,0	1/1:0,14:14:42.02:384,42,0	1/1:1,7:8:18.01:165,18,0	1/1:6,26:32:78.04:714,78,0	1/1:1,18:19:48.02:439,48,0	0/0:19,0:19:54.16:0,54,623	0/0:20,0:20:54.16:0,54,623	0/0:18,0:18:42.12:0,42,485	0/0:24,0:24:66.19:0,66,753	0/0:15,0:15:39.12:0,39,450	0/0:23,0:23:63.19:0,63,727	0/0:18,0:18:51.15:0,51,588	1/1:1,31:32:81.04:741,81,0	1/1:1,15:16:45.02:412,45,0	1/1:5,14:19:41.98:377,42,0	1/1:2,16:18:47.94:428,48,0	1/1:0,9:9:24.01:220,24,0	0/0:5,0:5:12.04:0,12,138	0/0:10,0:10:27.07:0,27,303	0/0:11,0:11:27.08:0,27,311	1/1:1,24:25:69.04:632,69,0	1/1:0,23:23:69.04:631,69,0	1/1:2,20:22:48.02:439,48,0	1/1:1,16:17:48.03:439,48,0
chr10	110182441	.	T	TAA	1889.82	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-2.674;DP=561;FS=1.596;HRun=12;HaplotypeScore=76.5747;InbreedingCoeff=0.9388;MQ=71.42;MQ0=0;MQRankSum=0.649;QD=20.77;ReadPosRankSum=-1.405;VQSLOD=2.9409;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:24:47.62:0,48,474	0/0:10,0:11:17.70:0,18,151	0/0:17,0:15:8.08:0,8,155	0/0:12,0:9:5.67:0,6,34	1/1:10,18:32:56.93:620,57,0	1/1:1,14:20:43.55:494,44,0	1/1:1,9:13:20.04:228,20,0	0/0:40,0:44:62.81:0,63,707	0/0:17,0:18:41.70:0,42,367	0/0:32,0:34:77.49:0,77,690	0/0:27,0:28:53.82:0,54,542	0/0:11,0:11:23.94:0,24,222	0/0:13,0:14:35.75:0,36,312	0/0:10,0:11:26.75:0,27,234	0/0:18,0:19:35.81:0,36,374	0/0:22,0:22:57.01:0,57,523	0/0:19,0:20:47.58:0,48,416	0/0:16,0:16:33.45:0,33,353	0/0:12,0:13:23.66:0,24,200	0/0:29,0:29:38.10:0,38,526	0/0:12,0:16:34.97:0,35,265	0/0:16,0:18:44.76:0,45,400	0/0:17,0:18:38.89:0,39,408	0/0:11,0:11:14.58:0,15,121	1/1:4,20:26:53.66:708,54,0	0/0:18,0:18:20.12:0,20,364	0/0:35,0:35:68.82:0,69,632	0/0:9,0:9:20.97:0,21,194
chr10	110182880	.	CGCTGTCTCAGA	C	5780.85	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.431;DP=818;FS=6.352;HRun=0;HaplotypeScore=258.0512;InbreedingCoeff=0.9983;MQ=88.84;MQ0=0;MQRankSum=-12.435;QD=61.50;ReadPosRankSum=-0.710;VQSLOD=3.8102;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:96.33:0,96,5059	0/0:10,0:10:21.07:0,21,1024	0/0:31,0:31:63.15:0,63,2097	0/0:31,0:31:59.69:0,60,2659	1/1:4,19:23:44.92:1178,45,0	1/1:4,23:26:57.15:1833,57,0	1/1:3,16:19:36.12:1168,36,0	0/0:31,0:31:72.22:0,72,2917	0/0:39,0:39:93.30:0,93,4678	0/0:41,0:41:99:0,108,5626	0/0:19,0:19:51.16:0,51,2593	0/0:37,0:37:99:0,108,5431	0/0:24,0:24:69.24:0,69,3813	0/0:32,0:32:87.28:0,87,4291	0/0:49,0:49:99:0,126,6386	0/0:30,0:30:78.24:0,78,3902	0/0:30,0:30:81.28:0,81,4383	0/0:27,0:27:72.25:0,72,3881	0/0:19,0:19:45.13:0,45,2077	0/0:20,0:20:45.15:0,45,2175	0/0:58,0:58:99:0,147,7603	0/0:26,0:26:63.22:0,63,3408	0/0:24,0:24:63.19:0,63,2999	0/0:34,0:34:99:0,99,5026	1/1:4,21:25:48.16:1602,48,0	0/0:26,0:26:60.18:0,60,3042	0/0:35,0:35:84.29:0,84,4524	0/0:13,0:13:24.08:0,24,1266
chr10	110183321	.	T	TCAACAA	9370.71	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-4.550;DP=663;FS=15.518;HRun=0;HaplotypeScore=134.1152;InbreedingCoeff=0.9479;MQ=65.65;MQ0=1;MQRankSum=-11.990;QD=37.33;ReadPosRankSum=-3.714;VQSLOD=2.9881;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:12,10:23:30.53:797,31,0	0/0:9,0:9:21.07:0,21,438	0/0:25,0:21:11:0,11,316	0/0:26,0:23:27.02:0,27,405	0/0:21,0:21:49.98:0,50,992	0/0:26,0:26:45.14:0,45,887	0/0:26,0:26:54.19:0,54,1127	1/1:24,3:27:24.07:633,24,0	1/1:16,17:34:57.20:1846,57,0	0/0:26,0:27:60.21:0,60,1232	0/0:20,0:20:42.14:0,42,842	0/0:29,0:29:57.20:0,57,1172	0/0:27,0:28:69.24:0,69,1405	0/0:26,0:26:60.19:0,60,1214	0/0:29,0:29:51.17:0,51,1017	0/0:28,0:28:63.22:0,63,1315	1/1:11,10:21:24.08:787,24,0	1/1:9,1:10:3.01:98,3,0	1/1:8,5:14:24.03:605,24,0	1/1:17,7:26:54.06:1338,54,0	1/1:15,1:20:11.99:314,12,0	0/0:27,0:27:66.23:0,66,1362	0/0:19,0:19:30.10:0,30,613	0/0:21,0:21:45.15:0,45,939	0/0:24,0:24:54.19:0,54,1127	1/1:22,9:32:33.10:997,33,0	1/1:20,18:39:57.20:1863,57,0	1/1:3,0:3:6.02:93,6,0
chr10	110183508	.	AG	A	2610.65	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.923;DP=647;FS=3.218;HRun=5;HaplotypeScore=75.7836;InbreedingCoeff=0.9967;MQ=76.87;MQ0=0;MQRankSum=0.536;QD=29.01;ReadPosRankSum=-0.363;VQSLOD=3.9608;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.19:0,63,842	0/0:17,0:17:48.16:0,48,650	0/0:17,1:18:18.98:0,19,435	0/0:13,0:12:20.98:0,21,235	1/1:1,19:20:54.15:612,54,0	1/1:1,20:21:57.06:628,57,0	1/1:0,30:30:84.24:953,84,0	0/0:28,0:28:78.17:0,78,996	0/0:19,0:19:48.16:0,48,656	0/0:25,0:25:72.23:0,72,965	0/0:22,0:22:60.20:0,60,818	0/0:27,0:27:78.25:0,78,1050	0/0:18,0:18:51.17:0,51,696	0/0:25,0:25:66.22:0,66,899	0/0:21,0:21:60.20:0,60,819	0/0:20,0:20:57.19:0,57,780	0/0:36,0:36:99:0,102,1378	0/0:19,0:19:57.19:0,57,779	0/0:19,0:19:57.17:0,57,755	0/0:24,0:24:72.23:0,72,968	0/0:40,0:39:99:0,108,1440	0/0:20,0:20:51.17:0,51,697	0/0:24,0:24:69.23:0,69,941	0/0:33,0:33:87.28:0,87,1172	1/1:1,18:19:51.15:578,51,0	0/0:27,0:27:78.26:0,78,1064	0/0:32,0:32:87.24:0,87,1153	0/0:9,0:9:27.09:0,27,369
chr10	110184204	.	CCTGCCT	C	3226.07	PASS	AB=0.821;AC=22;AF=0.393;AN=56;BaseQRankSum=10.523;DP=525;FS=0.000;HRun=0;HaplotypeScore=118.2721;InbreedingCoeff=0.7886;MQ=54.96;MQ0=2;MQRankSum=-3.895;QD=15.58;ReadPosRankSum=1.013;VQSLOD=2.6685;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,23:35:21.07:446,21,0	0/0:10,0:10:21.06:0,21,618	0/0:24,0:17:30.03:0,30,768	0/1:16,0:14:4.64:5,0,836	0/0:12,0:19:5.84:0,6,116	0/0:22,0:22:29.95:0,30,477	0/0:23,0:23:29.92:0,30,365	1/1:11,15:26:35.77:374,36,0	1/1:6,7:12:18.06:355,18,0	0/0:23,0:23:36.06:0,36,1042	0/0:12,0:12:21.07:0,21,696	0/0:18,0:18:51.16:0,51,1603	0/0:15,0:15:39.13:0,39,1192	0/0:27,0:27:74.94:0,75,2161	0/0:20,0:20:39.11:0,39,1132	0/0:29,0:29:72.25:0,72,2356	1/1:5,12:17:18.02:338,18,0	1/1:3,4:7:9.03:191,9,0	1/1:6,15:20:38.90:456,39,0	1/1:4,3:7:6:87,6,0	1/1:16,14:30:3.01:56,3,0	0/0:12,0:12:25.23:0,25,566	0/0:8,0:8:21.05:0,21,606	0/0:31,0:31:75.15:0,75,2034	0/0:14,0:25:24.01:0,24,529	0/1:8,10:18:69.73:426,0,70	1/1:1,11:11:24.08:509,24,0	1/1:0,4:4:9.03:191,9,0
chr10	110185258	.	AG	A	2382.10	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.876;DP=651;FS=2.879;HRun=1;HaplotypeScore=66.6771;InbreedingCoeff=0.9981;MQ=80.57;MQ0=0;MQRankSum=-1.094;QD=30.15;ReadPosRankSum=0.706;VQSLOD=3.3900;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,156,2121	0/0:8,0:8:24.07:0,24,317	0/0:21,0:21:53.33:0,53,721	0/0:12,0:12:30.03:0,30,392	1/1:0,24:24:56.95:683,57,0	1/1:0,23:23:63.21:878,63,0	1/1:0,18:18:36.12:502,36,0	0/0:39,0:39:99:0,117,1463	0/0:22,0:22:61:0,61,797	0/0:30,0:30:90.06:0,90,1146	0/0:23,0:23:54.15:0,54,717	0/0:21,0:21:63.18:0,63,842	0/0:16,0:16:48.15:0,48,650	0/0:19,0:19:57.14:0,57,727	0/0:27,0:27:81.20:0,81,1071	0/0:19,0:19:57.15:0,57,743	0/0:27,0:27:81.23:0,81,1093	0/0:21,0:21:60.20:0,60,836	0/0:26,0:26:77.38:0,77,934	0/0:32,0:32:93.28:0,93,1272	0/0:32,0:32:93.21:0,93,1207	0/0:25,0:25:69.21:0,69,936	0/0:26,0:26:66.20:0,66,895	0/0:17,0:17:51.15:0,51,692	1/1:1,13:14:36.08:479,36,0	0/0:24,0:24:72.20:0,72,956	0/0:26,0:26:75.14:0,75,931	0/0:7,0:7:21.07:0,21,293
chr10	110185511	.	TTAGCAGACCCCAGAAGACACAGGCAC	T	1043.81	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=1.576;DP=778;FS=4.616;HRun=0;HaplotypeScore=424.4826;InbreedingCoeff=0.8805;MQ=59.85;MQ0=31;MQRankSum=2.189;QD=8.22;ReadPosRankSum=2.793;VQSLOD=0.9344;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:48:72.96:0,73,1060	0/0:5,0:5:15.05:0,15,278	1/1:27,0:13:0.31:1,0,0	./.	1/1:11,9:18:9.57:78,10,0	1/1:30,0:26:20.66:466,21,0	1/1:29,0:25:27.05:399,27,0	0/0:29,0:25:19.31:0,19,322	0/0:32,0:32:58.08:0,58,1043	0/0:25,0:25:54.18:0,54,942	0/0:7,0:7:3.01:0,3,53	0/0:32,0:31:54.18:0,54,986	0/0:25,0:25:45.15:0,45,894	0/0:28,0:28:57.13:0,57,1146	0/0:37,0:37:63.20:0,63,1270	0/0:19,0:18:33.11:0,33,661	0/0:41,0:39:70.02:0,70,1242	0/0:26,0:22:48.14:0,48,907	0/0:24,0:23:22.79:0,23,364	0/0:16,0:14:19.10:0,19,252	0/0:69,0:56:92.70:0,93,1636	0/0:18,0:18:24.08:0,24,388	0/0:20,0:20:24.08:0,24,430	0/0:37,0:37:72.21:0,72,1482	1/1:21,0:17:18.03:253,18,0	0/0:36,0:30:47.31:0,47,819	0/0:30,0:27:45.15:0,45,838	0/0:14,0:11:12.01:0,12,174
chr10	110186895	.	CTTTCT	C	2653.56	PASS	AB=0.998;AC=19;AF=0.352;AN=54;BaseQRankSum=10.481;DP=634;FS=9.870;HRun=0;HaplotypeScore=138.5739;InbreedingCoeff=-0.3389;MQ=56.31;MQ0=4;MQRankSum=-2.132;QD=6.47;ReadPosRankSum=2.535;VQSLOD=2.0548;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:88.99:89,0,649	0/0:8,0:8:24.04:0,24,392	./.	0/1:3,0:3:5.78:6,0,30	1/1:0,29:29:57.17:768,57,0	0/1:13,0:13:99:197,0,121	0/1:23,0:23:10.40:270,0,10	0/1:24,0:24:12.12:12,0,549	0/1:32,0:32:46.88:47,0,479	0/0:26,0:25:65.68:0,66,1131	0/0:31,0:31:90.30:0,90,1956	0/0:28,0:28:36.12:0,36,757	0/0:18,0:18:24.01:0,24,413	0/0:23,0:23:45.15:0,45,849	0/0:28,0:28:42.14:0,42,741	0/0:39,0:38:99:0,99,2034	0/1:19,0:20:61.94:62,0,270	0/1:22,0:22:25.90:26,0,447	0/1:27,0:26:99:135,0,516	0/1:23,0:23:71.74:72,0,405	0/1:13,0:13:41.87:42,0,280	0/1:25,0:25:1.79:2,0,1021	0/1:23,0:23:23.92:24,0,565	0/0:22,0:22:33.60:0,34,652	0/1:30,1:31:73.28:662,0,73	0/1:30,0:30:99:270,0,384	0/1:29,0:29:99:104,0,411	0/1:5,0:4:27.13:27,0,35
chr10	110186899	.	CT	C	2701.26	PASS	AB=0.963;AC=19;AF=0.352;AN=54;BaseQRankSum=8.318;DP=646;FS=4.190;HRun=4;HaplotypeScore=96.8491;InbreedingCoeff=0.1413;MQ=57.16;MQ0=4;MQRankSum=1.489;QD=8.11;ReadPosRankSum=0.810;VQSLOD=0.2949;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:41.66:42,0,661	0/0:9,0:9:27.05:0,27,334	./.	0/1:3,0:3:14.63:15,0,28	1/1:29,0:29:56.85:617,57,0	1/1:1,12:13:39.08:452,39,0	1/1:3,18:21:45.13:529,45,0	0/1:25,0:25:5.70:6,0,663	0/0:33,0:33:47.12:0,47,584	0/0:25,0:24:68.89:0,69,928	0/0:30,0:30:90.30:0,90,1244	0/0:29,0:29:39.76:0,40,376	0/0:17,0:17:30:0,30,342	0/0:24,0:24:47.92:0,48,513	0/0:31,0:31:57.04:0,57,678	0/0:38,0:37:99:0,102,1392	0/0:22,0:22:35.08:0,35,400	0/1:23,1:24:22.86:23,0,463	0/1:31,0:30:65.10:65,0,680	0/1:24,0:24:23.17:23,0,437	0/1:13,2:15:40.24:40,0,292	0/1:23,0:23:2.41:2,0,523	0/1:20,0:20:24.63:25,0,366	0/0:23,1:24:25.50:0,25,412	1/1:4,27:31:75.01:858,75,0	0/1:33,0:33:99:156,0,502	0/0:30,0:30:13.21:0,13,487	0/1:2,1:2:27.33:27,0,35
chr10	110188299	.	AC	A	3183.31	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.106;DP=722;FS=3.228;HRun=1;HaplotypeScore=68.3941;InbreedingCoeff=0.9998;MQ=90.93;MQ0=1;MQRankSum=-1.601;QD=36.17;ReadPosRankSum=2.694;VQSLOD=4.0514;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,141,2160	0/0:14,0:14:42.14:0,42,668	0/0:34,0:34:99:0,102,1482	0/0:26,0:26:65.65:0,66,937	1/1:1,20:21:50.98:827,51,0	1/1:0,29:29:69.23:965,69,0	1/1:0,23:23:66.22:923,66,0	0/0:48,0:48:99:0,141,2146	0/0:27,0:27:78.25:0,78,1216	0/0:32,0:32:93.28:0,93,1459	0/0:23,0:23:69.21:0,69,1056	0/0:28,0:28:84.27:0,84,1310	0/0:18,0:18:51.15:0,51,783	0/0:17,0:17:48.63:0,49,767	0/0:43,0:43:99:0,123,1959	0/0:27,0:27:81.28:0,81,1294	0/0:23,0:23:69.21:0,69,1065	0/0:17,0:16:45.15:0,45,718	0/0:25,0:24:72.25:0,72,1145	0/0:27,0:27:81.28:0,81,1294	0/0:28,0:28:81.28:0,81,1294	0/0:23,0:23:69.23:0,69,1091	0/0:18,0:18:54.14:0,54,792	0/0:27,0:27:81.28:0,81,1294	1/1:0,15:15:45.15:629,45,0	0/0:25,0:25:75.25:0,75,1172	0/0:23,0:23:66.19:0,66,1001	0/0:10,0:10:30.09:0,30,455
chr10	110188409	.	T	TG	223.34	PASS	AB=0.798;AC=7;AF=0.125;AN=56;BaseQRankSum=3.112;DP=605;FS=42.981;HRun=0;HaplotypeScore=76.1694;InbreedingCoeff=0.3702;MQ=61.08;MQ0=2;MQRankSum=2.670;QD=2.54;ReadPosRankSum=3.170;VQSLOD=0.8556;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:70.48:0,70,461	0/0:14,0:14:41.95:0,42,369	0/0:22,0:9:9.49:0,9,138	0/1:17,0:7:1.50:1,0,34	0/1:13,6:20:26.78:57,0,27	0/1:7,8:15:6.84:30,0,7	1/1:15,0:15:0.87:133,1,0	0/0:46,0:46:99:0,118,766	0/0:16,0:16:38.51:0,39,246	0/0:29,0:28:78.04:0,78,752	0/0:18,0:18:49.72:0,50,445	0/0:13,0:12:30.01:0,30,278	0/0:16,1:17:40.69:0,41,335	0/0:21,0:21:58.24:0,58,517	0/0:25,0:25:60.06:0,60,567	0/0:27,0:26:68.68:0,69,639	0/0:40,0:40:44.83:0,45,359	0/0:18,0:18:42.96:0,43,283	0/0:17,0:15:43.59:0,44,322	0/0:23,0:21:57.27:0,57,424	0/0:9,0:9:24.78:0,25,179	0/0:22,0:22:58.05:0,58,436	0/0:14,0:14:32.97:0,33,275	0/0:26,0:26:66.49:0,66,594	1/1:21,0:21:1.65:114,2,0	0/0:27,0:27:67.79:0,68,435	0/0:25,0:25:44.54:0,45,336	0/0:9,0:8:20.53:0,21,114
chr10	110190430	.	A	AC	15902.04	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-17.739;DP=761;FS=7.554;HRun=0;HaplotypeScore=70.1089;InbreedingCoeff=0.9954;MQ=92.68;MQ0=0;MQRankSum=-4.336;QD=39.76;ReadPosRankSum=1.330;VQSLOD=5.2630;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,46:47:99:2002,119,0	0/0:9,0:9:27.07:0,27,347	0/0:31,0:31:90.25:0,90,1170	0/0:32,0:32:92.71:0,93,1136	1/1:0,22:22:54.01:769,54,0	1/1:0,19:19:51.17:797,51,0	1/1:1,16:17:42.14:657,42,0	1/1:3,32:35:96.28:1429,96,0	1/1:1,25:26:27.29:990,27,0	0/0:31,0:31:90.30:0,90,1245	0/0:11,0:11:33.11:0,33,461	0/0:27,0:27:81.25:0,81,1103	0/0:24,0:24:66.48:0,66,938	0/0:32,0:32:96.29:0,96,1283	0/0:44,0:44:99:0,132,1814	0/0:53,0:53:99:0,160,2176	1/1:0,23:23:54.18:844,54,0	1/1:0,14:14:36.12:563,36,0	1/1:1,27:28:81.07:1084,81,0	1/1:1,24:25:66.08:973,66,0	1/1:1,53:54:99:2111,135,0	0/0:25,0:25:72.23:0,72,987	0/0:19,0:19:57.18:0,57,781	0/0:23,0:23:69.21:0,69,931	1/1:1,25:26:63.21:985,63,0	1/1:1,31:32:90.28:1384,90,0	1/1:1,27:28:72.24:1126,72,0	1/1:0,4:4:12.04:188,12,0
chr10	110191237	.	AT	A	2310.78	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.235;DP=682;FS=8.469;HRun=9;HaplotypeScore=66.4876;InbreedingCoeff=0.9618;MQ=73.47;MQ0=0;MQRankSum=0.104;QD=20.45;ReadPosRankSum=0.550;VQSLOD=4.0634;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,114,1316	0/0:14,0:14:36.11:0,36,415	0/0:14,1:15:8.71:0,9,327	0/0:11,0:11:7.55:0,8,90	1/1:3,29:32:78.04:714,78,0	1/1:3,22:25:62.71:576,63,0	1/1:4,27:31:75.04:686,75,0	0/0:46,0:47:99:0,109,1202	0/0:25,0:25:69.21:0,69,796	0/0:23,0:23:66.20:0,66,762	0/0:17,0:17:48.14:0,48,552	0/0:23,0:23:69.20:0,69,795	0/0:23,0:23:66.19:0,66,754	0/0:23,0:23:69.19:0,69,787	0/0:27,0:27:55.15:0,55,832	0/0:30,0:30:84.25:0,84,966	0/0:25,0:25:69.20:0,69,795	0/0:21,0:21:48.14:0,48,554	0/0:32,0:32:81.22:0,81,923	0/0:20,1:21:32.71:0,33,630	0/0:17,0:17:48.14:0,48,554	0/0:25,0:25:63.17:0,63,710	0/0:21,0:21:60.14:0,60,677	0/0:15,0:15:45.12:0,45,509	1/1:2,23:25:54.01:494,54,0	0/0:22,0:21:63.19:0,63,727	0/0:32,0:31:93.28:0,93,1073	0/0:17,0:17:51.15:0,51,589
chr10	110192256	.	GA	G	1290.84	PASS	AB=0.751;AC=26;AF=0.464;AN=56;BaseQRankSum=4.769;DP=553;FS=2.458;HRun=17;HaplotypeScore=78.9405;InbreedingCoeff=0.0189;MQ=61.30;MQ0=8;MQRankSum=1.658;QD=3.46;ReadPosRankSum=4.511;VQSLOD=0.1998;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,22:38:4.33:250,4,0	0/0:6,0:6:8.97:0,9,70	0/0:27,0:10:12.08:0,12,91	0/0:19,0:8:6.24:0,6,32	1/1:1,0:22:19.45:55,19,0	1/1:3,0:19:26.01:74,26,0	1/1:5,0:12:11.74:34,12,0	0/1:16,11:29:12.57:96,0,13	0/1:13,5:19:26.03:106,0,26	0/0:20,2:24:2.05:0,2,178	0/0:13,2:21:6.26:0,6,194	0/0:15,1:16:4.47:0,4,112	0/1:8,3:11:29.35:29,0,66	0/1:9,1:9:12.48:12,0,86	0/1:31,6:39:60.04:60,0,438	0/0:22,2:25:24.28:0,24,354	1/1:10,9:20:20.76:200,21,0	0/1:12,6:21:10.78:103,0,11	0/1:12,4:17:27.89:71,0,28	0/1:13,9:22:56.99:57,0,60	1/1:7,2:12:7.63:39,8,0	0/0:12,1:13:4.04:0,4,113	0/1:9,3:11:7.92:8,0,112	0/0:25,1:28:9.84:0,10,277	1/1:1,0:15:17.04:56,17,0	0/1:10,9:21:63.94:64,0,64	0/1:8,12:21:57.30:114,0,57	0/1:7,3:10:12.32:38,0,12
chr10	110193453	.	TTTATTATTATTA	T	2023.05	PASS	AB=0.692;AC=23;AF=0.548;AN=42;BaseQRankSum=3.212;DP=286;FS=3.721;HRun=0;HaplotypeScore=94.2802;InbreedingCoeff=0.5757;MQ=74.61;MQ0=2;MQRankSum=-3.097;QD=12.11;ReadPosRankSum=-0.353;VQSLOD=1.8604;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,3:13:6.02:176,6,0	0/0:2,0:4:9.03:0,9,235	./.	0/0:5,0:5:0:0,0,0	0/1:5,0:9:8.19:48,0,8	1/1:3,0:8:8.98:71,9,0	./.	1/1:32,0:28:3.01:40,3,0	./.	0/0:9,0:9:9.03:0,9,420	./.	0/0:7,0:8:3.01:0,3,97	0/0:7,0:7:3.01:0,3,96	0/0:10,0:10:12.04:0,12,640	0/0:9,0:9:9.03:0,9,486	0/0:10,0:10:12.04:0,12,385	1/1:13,7:20:2.95:103,3,0	1/1:10,1:17:6.02:143,6,0	1/1:6,5:11:15.05:459,15,0	1/1:7,3:10:6.02:180,6,0	1/1:7,3:10:3.01:103,3,0	./.	./.	./.	0/0:13,0:18:15.05:0,15,215	1/1:11,4:15:7.99:190,8,0	1/1:12,3:15:9.03:308,9,0	1/1:2,5:7:12.04:354,12,0
chr10	110197513	.	C	CCA	3767.20	PASS	AB=0.957;AC=49;AF=0.875;AN=56;BaseQRankSum=-6.181;DP=313;FS=0.970;HRun=0;HaplotypeScore=389.8194;InbreedingCoeff=0.0207;MQ=61.98;MQ0=0;MQRankSum=1.312;QD=12.27;ReadPosRankSum=-4.989;VQSLOD=1.9206;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,1:19:20.70:166,21,0	1/1:4,0:4:10.26:103,10,0	1/1:7,0:10:23.02:190,23,0	0/1:8,0:10:5.22:99,0,5	1/1:15,0:15:32.62:157,33,0	1/1:8,0:8:1.68:54,2,0	1/1:6,1:7:8.95:68,9,0	1/1:13,0:13:23.57:212,24,0	1/1:9,0:9:20.75:157,21,0	1/1:7,0:7:11.68:93,12,0	1/1:7,0:7:17.02:138,17,0	1/1:16,1:17:1.87:182,2,0	1/1:6,0:6:9.44:73,9,0	0/1:10,0:10:3.07:84,0,3	1/1:21,1:22:22.98:237,23,0	1/1:11,0:11:17.95:144,18,0	0/1:10,0:10:16.39:16,0,20	1/1:6,0:6:11.95:94,12,0	1/1:6,0:6:13.23:102,13,0	1/1:11,0:11:10.56:124,11,0	1/1:9,0:9:8.97:72,9,0	1/1:17,1:18:26.20:257,26,0	1/1:9,2:11:20.82:199,21,0	0/0:5,1:6:1.25:0,1,3	0/1:14,0:14:3.67:67,0,4	1/1:27,0:27:52.23:469,52,0	1/1:12,1:13:13.10:174,13,0	0/1:6,0:6:4.87:36,0,5
chr10	110198288	.	ATTT	A	5822.28	PASS	AB=0.813;AC=23;AF=0.411;AN=56;BaseQRankSum=6.962;DP=561;FS=2.077;HRun=13;HaplotypeScore=88.1526;InbreedingCoeff=0.9600;MQ=71.68;MQ0=1;MQRankSum=-1.986;QD=22.57;ReadPosRankSum=5.524;VQSLOD=4.0816;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,20:26:39.04:474,39,0	0/0:12,0:12:36.10:0,36,618	0/0:17,0:14:24.53:0,25,356	0/0:16,0:14:24.11:0,24,281	0/0:21,0:27:75.08:0,75,1162	0/0:21,0:22:60.12:0,60,1002	0/0:22,0:27:63.15:0,63,1025	1/1:9,20:29:56.97:651,57,0	1/1:4,14:18:30.02:365,30,0	0/0:22,0:23:57.15:0,57,908	0/0:13,0:16:42.06:0,42,675	0/0:21,0:23:60.19:0,60,1060	0/0:14,0:15:36.04:0,36,558	0/0:10,0:10:30.10:0,30,528	0/0:25,0:25:69.14:0,69,1100	0/1:10,1:13:0.44:0,0,483	1/1:2,30:32:59.95:927,60,0	1/1:7,18:25:36.02:437,36,0	1/1:2,11:13:33.08:401,33,0	1/1:4,10:14:32.98:381,33,0	1/1:1,13:14:29.98:365,30,0	0/0:15,0:18:51.15:0,51,806	0/0:14,0:16:48.12:0,48,781	0/0:14,0:16:39.09:0,39,638	0/0:20,0:20:51.16:0,51,874	1/1:5,18:23:48.06:583,48,0	1/1:6,24:30:66.09:801,66,0	1/1:5,16:21:36.06:438,36,0
chr10	110199466	.	T	TGCTCGTGGTAGGTGTAA	63615.83	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=1.092;DP=700;FS=0.290;HRun=0;HaplotypeScore=283.2056;InbreedingCoeff=0.9233;MQ=74.93;MQ0=0;MQRankSum=-20.484;QD=151.47;ReadPosRankSum=-0.788;VQSLOD=4.0342;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,8:38:87.14:5686,87,0	0/0:7,0:7:15.05:0,15,661	0/0:23,0:23:63.20:0,63,2524	0/0:17,0:17:42.14:0,42,1553	1/1:13,3:18:32.72:1347,33,0	1/1:12,10:24:63.22:4686,63,0	1/1:13,6:19:45.15:3415,45,0	1/1:36,0:36:96.33:5900,96,0	1/1:12,8:22:57.20:4194,57,0	0/0:29,0:29:84.29:0,84,3920	0/0:20,0:20:57.20:0,57,2666	0/0:34,0:34:99:0,99,4670	0/0:16,0:16:48.16:0,48,2112	0/0:25,0:25:75.24:0,75,3283	0/0:37,0:37:99:0,111,4956	0/1:32,0:32:99:159,0,3706	1/1:13,6:23:51.18:3688,51,0	1/1:10,4:17:36.12:2928,36,0	1/1:18,5:27:78.18:4328,78,0	1/1:13,8:23:54.06:3589,54,0	1/1:19,7:28:54.14:4023,54,0	0/0:27,0:27:81.26:0,81,3563	0/0:22,0:22:63.22:0,63,3010	0/0:23,0:23:69.21:0,69,2940	1/1:17,11:30:69.14:4782,69,0	1/1:23,10:37:96.29:6381,96,0	1/1:19,16:41:99:7341,105,0	1/1:2,3:5:15.05:1168,15,0
chr10	110200435	.	A	AAT	6168.80	PASS	AB=0.613;AC=20;AF=0.370;AN=54;BaseQRankSum=1.103;DP=389;FS=4.046;HRun=0;HaplotypeScore=50.8007;InbreedingCoeff=0.7687;MQ=66.56;MQ0=1;MQRankSum=-0.027;QD=29.80;ReadPosRankSum=-2.934;VQSLOD=4.7644;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,22:28:10.97:701,11,0	0/0:6,0:6:18.06:0,18,222	0/0:7,0:7:11.72:0,12,105	./.	0/0:20,0:20:51.14:0,51,619	0/0:17,0:17:45.14:0,45,557	0/0:6,0:6:18.06:0,18,222	1/1:14,33:47:66.14:1544,66,0	1/1:4,4:9:12.04:197,12,0	0/0:21,0:21:51.15:0,51,621	0/0:13,0:13:30.08:0,30,360	0/0:17,0:17:24.08:0,24,298	0/0:9,0:9:15.05:0,15,186	0/0:9,0:9:15.05:0,15,186	0/0:9,0:9:27.08:0,27,335	0/0:8,0:8:18.06:0,18,223	1/1:5,18:23:48.16:787,48,0	1/1:2,17:19:48.16:787,48,0	1/1:10,14:24:7.93:628,8,0	1/1:1,5:6:12.04:183,12,0	1/1:2,2:4:3.01:49,3,0	0/0:5,0:5:6.02:0,6,74	0/0:5,0:5:12.04:0,12,149	0/0:7,0:7:12.02:0,12,135	0/0:16,0:16:36.11:0,36,446	0/1:4,6:12:53.34:201,0,53	0/1:8,10:19:1.09:487,0,1	1/1:2,13:15:6.14:604,6,0
chr10	110202495	.	AC	A	452.57	PASS	AB=1.000;AC=9;AF=0.265;AN=34;BaseQRankSum=0.654;DP=159;FS=0.961;HRun=8;HaplotypeScore=24.6581;InbreedingCoeff=0.7400;MQ=67.08;MQ0=12;MQRankSum=0.400;QD=9.43;ReadPosRankSum=2.400;VQSLOD=-0.0776;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:3:6.02:0,6,72	0/0:21,0:7:17.13:0,17,128	0/1:17,0:5:12.46:12,0,21	1/1:0,8:8:15.02:144,15,0	1/1:0,6:6:15.02:145,15,0	1/1:2,5:8:12.02:115,12,0	./.	./.	0/0:8,0:8:20.41:0,20,207	0/0:5,0:5:9.01:0,9,53	0/0:9,0:9:14.58:0,15,196	0/0:6,0:5:11.98:0,12,119	0/0:7,0:8:17.88:0,18,179	0/0:7,0:7:21.04:0,21,232	0/0:9,0:6:18.01:0,18,200	./.	./.	./.	./.	./.	0/0:4,0:4:8.96:0,9,90	0/0:5,0:5:8.90:0,9,74	0/0:9,0:13:20.06:0,20,266	1/1:0,9:9:18.03:173,18,0	./.	./.	./.
chr10	110202711	.	CAAA	C	2727.85	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=3.076;DP=432;FS=7.817;HRun=15;HaplotypeScore=73.5751;InbreedingCoeff=0.9480;MQ=48.60;MQ0=41;MQRankSum=-3.797;QD=19.35;ReadPosRankSum=4.827;VQSLOD=2.4791;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,11:12:20.84:263,21,0	0/0:7,0:10:26.71:0,27,360	0/0:18,0:7:13.78:0,14,160	0/0:22,0:7:2.80:0,3,81	0/0:13,0:17:27.05:0,27,392	0/0:9,0:15:36.08:0,36,532	0/0:9,0:14:36.12:0,36,553	1/1:4,10:13:22.42:294,22,0	1/1:1,6:5:12.03:135,12,0	0/0:15,0:17:45.06:0,45,649	0/0:18,0:23:39.07:0,39,597	0/0:12,0:18:44.87:0,45,635	0/0:2,0:10:12:0,12,149	0/0:7,0:10:18.02:0,18,228	0/0:14,0:23:39.07:0,39,571	0/0:16,0:17:42.10:0,42,644	1/1:3,12:12:30.08:334,30,0	1/1:1,14:15:42.11:471,42,0	1/1:5,8:8:24.07:269,24,0	1/1:1,9:11:22.48:250,22,0	1/1:2,7:9:16.44:183,16,0	0/0:6,0:12:27.09:0,27,429	0/0:10,0:12:21.07:0,21,292	0/0:8,0:12:24.08:0,24,376	0/0:9,0:22:58.08:0,58,903	1/1:2,10:13:26.93:315,27,0	1/1:4,11:16:32.88:336,33,0	1/1:2,3:3:9.02:99,9,0
chr10	110202788	.	T	TGCAGACGCCACAGCAGAGCAGGC	18458.95	PASS	AB=0.963;AC=23;AF=0.411;AN=56;BaseQRankSum=2.497;DP=409;FS=15.137;HRun=0;HaplotypeScore=230.3662;InbreedingCoeff=0.9065;MQ=89.62;MQ0=0;MQRankSum=-11.886;QD=147.67;ReadPosRankSum=-1.196;VQSLOD=3.2513;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,5:13:30.10:2973,30,0	0/0:13,0:13:36.08:0,36,1870	0/0:13,0:13:39.06:0,39,1374	0/0:24,0:24:72.19:0,72,2485	0/0:17,0:17:48.16:0,48,2603	0/0:14,0:14:42.14:0,42,2438	0/0:30,0:30:87.28:0,87,4795	1/1:7,0:7:15.05:963,15,0	1/1:6,4:11:24.08:2155,24,0	0/0:20,0:20:60.21:0,60,3498	0/0:12,0:12:27.09:0,27,1545	0/0:17,0:17:45.15:0,45,2616	0/0:18,0:18:36.12:0,36,2248	0/0:18,0:18:51.13:0,51,2994	0/0:28,0:28:75.23:0,75,4137	0/1:25,1:26:99:254,0,4427	1/1:8,3:11:21.07:1820,21,0	1/1:6,1:7:15.03:1093,15,0	1/1:5,1:7:18.06:1023,18,0	1/1:4,3:7:15.05:1601,15,0	1/1:15,1:16:21.07:1686,21,0	0/0:10,0:10:27.09:0,27,1614	0/0:8,0:8:24.07:0,24,1176	0/0:18,0:18:51.18:0,51,2995	0/0:24,0:24:69.24:0,69,4060	1/1:8,2:10:21.07:2147,21,0	1/1:3,4:7:21.07:2060,21,0	1/1:1,1:3:9:683,9,0
chr10	110203651	.	TG	T	3815.54	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=0.484;DP=719;FS=7.999;HRun=2;HaplotypeScore=101.1079;InbreedingCoeff=0.9975;MQ=79.01;MQ0=0;MQRankSum=2.830;QD=37.04;ReadPosRankSum=1.197;VQSLOD=3.5227;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,1955	0/0:10,0:10:27.09:0,27,405	0/0:23,0:23:63.20:0,63,898	0/0:28,0:28:79.81:0,80,1129	1/1:0,27:27:75.24:972,75,0	1/1:0,24:24:72.23:935,72,0	1/1:0,26:26:69.22:896,69,0	0/0:30,0:30:90.29:0,90,1329	0/0:23,0:23:66.21:0,66,968	0/0:35,0:35:99:0,102,1504	0/0:21,0:21:57.19:0,57,854	0/0:22,0:22:66.21:0,66,968	0/0:19,0:19:57.19:0,57,852	0/0:26,0:26:78.25:0,78,1148	0/0:41,0:41:99:0,114,1707	0/0:34,0:34:99:0,99,1481	0/0:21,0:21:63.21:0,63,944	0/0:17,0:17:45.15:0,45,674	0/0:22,0:22:63.16:0,63,879	0/0:20,0:20:57.19:0,57,845	0/0:31,0:31:87.26:0,87,1263	0/0:24,0:24:69.23:0,69,1030	0/0:20,0:20:51.17:0,51,763	0/0:31,1:32:57.34:0,57,1326	1/1:0,26:26:78.25:1013,78,0	0/0:33,0:33:99:0,99,1483	0/0:31,0:31:93.30:0,93,1366	0/0:6,0:6:18.06:0,18,263
chr10	110205089	.	TACACACACAC	T	6467.21	PASS	AB=0.643;AC=19;AF=0.352;AN=54;BaseQRankSum=8.513;DP=632;FS=24.494;HRun=0;HaplotypeScore=182.4658;InbreedingCoeff=0.8455;MQ=54.19;MQ0=11;MQRankSum=-7.389;QD=23.01;ReadPosRankSum=-1.145;VQSLOD=2.4769;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,14:36:15.93:432,16,0	0/0:10,0:10:18.06:0,18,713	0/0:25,0:6:0.47:0,0,1	0/0:29,0:10:3.01:0,3,44	0/0:28,0:28:32.30:0,32,373	0/0:19,0:19:17.21:0,17,94	0/0:19,0:19:14.07:0,14,136	1/1:26,8:34:23.86:492,24,0	1/1:7,16:23:39.13:1173,39,0	0/0:16,0:17:30.98:0,31,1087	0/0:17,0:17:36.12:0,36,1667	0/0:18,0:19:36.12:0,36,1468	0/0:22,0:22:51.18:0,51,2177	0/0:19,0:19:39.13:0,39,1738	0/0:27,0:28:69.21:0,69,2641	0/0:24,0:24:45.13:0,45,1935	1/1:17,17:33:30.99:904,31,0	0/1:12,15:26:73.04:442,0,73	1/1:13,6:19:15.48:414,15,0	1/1:17,17:35:48.03:1153,48,0	1/1:20,10:30:9.50:271,10,0	0/0:15,0:15:27.07:0,27,1065	0/0:15,0:17:33.11:0,33,1278	0/0:22,0:21:30.10:0,30,1379	0/0:20,0:20:13.76:0,14,145	1/1:15,9:25:26.98:646,27,0	1/1:5,12:17:18.06:542,18,0	./.
chr10	110205121	.	CACACAA	C	2168.53	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=13.734;DP=563;FS=2.636;HRun=0;HaplotypeScore=134.4139;InbreedingCoeff=0.1858;MQ=58.70;MQ0=8;MQRankSum=-12.604;QD=7.58;ReadPosRankSum=7.255;VQSLOD=2.0186;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:28:66.73:67,0,188	0/0:8,0:8:21.52:0,22,490	0/0:25,0:13:35.99:0,36,368	0/0:20,0:6:15.04:0,15,193	1/1:1,27:28:26.95:608,27,0	1/1:1,15:16:14.75:367,15,0	1/1:1,18:19:5.87:148,6,0	0/0:29,0:28:49.39:0,49,606	0/1:24,0:24:99:246,0,135	0/0:15,0:15:43.90:0,44,842	0/0:19,0:19:54.61:0,55,1448	0/0:19,0:19:54.11:0,54,1142	0/0:17,0:17:51.16:0,51,1583	0/0:15,0:15:45.14:0,45,1290	0/0:28,0:28:78.18:0,78,1789	0/0:23,0:23:63.14:0,63,1527	0/1:25,0:24:99:176,0,100	0/1:25,0:24:65.29:65,0,212	0/1:19,0:18:36.42:36,0,280	0/1:23,0:23:99:207,0,126	0/1:29,0:29:10.30:10,0,319	0/0:16,0:16:45.09:0,45,850	0/0:17,0:17:47.89:0,48,932	0/0:25,0:25:75.03:0,75,1327	1/1:3,12:15:9.50:219,10,0	0/1:18,0:18:91.28:91,0,224	0/1:16,0:16:48.09:104,0,48	0/0:1,0:1:2.97:0,3,20
chr10	110205956	.	GAAAAA	G	3988.64	PASS	AB=0.614;AC=20;AF=0.357;AN=56;BaseQRankSum=2.796;DP=524;FS=5.352;HRun=16;HaplotypeScore=100.8612;InbreedingCoeff=0.7736;MQ=58.02;MQ0=1;MQRankSum=-3.607;QD=18.81;ReadPosRankSum=3.570;VQSLOD=1.1535;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,13:21:9.74:158,10,0	0/0:13,0:16:42.13:0,42,954	0/0:11,0:4:0:0,0,0	0/0:15,0:8:12.03:0,12,171	0/0:31,0:31:71.42:0,71,1313	0/0:7,0:23:18.04:0,18,339	0/0:10,0:10:26.30:0,26,621	1/1:7,29:37:69.20:1050,69,0	1/1:5,12:17:4.29:307,4,0	0/0:21,0:22:42.03:0,42,940	0/0:12,0:17:48.16:0,48,970	0/0:22,0:23:54.11:0,54,1130	0/0:14,0:14:26.76:0,27,605	0/0:19,0:19:37.92:0,38,765	0/0:23,0:25:63.22:0,63,1445	0/0:8,0:16:32.77:0,33,727	1/1:7,17:25:19.90:538,20,0	0/1:6,14:20:20.80:330,0,21	1/1:5,8:13:20.09:233,20,0	1/1:8,15:24:18.22:370,18,0	1/1:0,11:11:22.86:245,23,0	0/0:15,0:16:36.09:0,36,757	0/0:18,0:21:53.42:0,53,743	0/0:14,0:18:45.15:0,45,1037	0/0:3,0:15:15.05:0,15,376	0/1:10,11:23:10.65:468,0,11	1/1:3,11:15:10.97:149,11,0	1/1:0,5:5:9.03:140,9,0
chr10	110206579	.	TAA	T	6317.26	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=13.132;DP=547;FS=11.627;HRun=11;HaplotypeScore=74.6113;InbreedingCoeff=0.9725;MQ=70.81;MQ0=1;MQRankSum=-1.551;QD=24.68;ReadPosRankSum=1.580;VQSLOD=3.4426;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:72.18:766,72,0	0/0:7,0:7:18.05:0,18,257	0/0:12,0:10:24:0,24,252	0/0:13,0:12:20.82:0,21,201	0/0:26,0:27:69.69:0,70,1026	0/0:21,0:21:54.17:0,54,809	0/0:18,0:18:48.15:0,48,718	1/1:8,24:33:63.01:725,63,0	1/1:2,19:21:51.12:543,51,0	0/0:11,0:11:33.11:0,33,491	0/0:27,0:28:66.21:0,66,979	0/0:17,0:17:42.12:0,42,604	0/0:15,0:15:33.11:0,33,508	0/0:12,0:13:26.58:0,27,378	0/0:25,0:25:63.21:0,63,950	0/0:15,0:15:36.12:0,36,554	1/1:2,33:34:78.19:830,78,0	1/1:3,16:19:48.11:511,48,0	1/1:4,19:23:57.12:606,57,0	1/1:3,23:26:66.13:700,66,0	1/1:2,3:5:3:32,3,0	0/0:17,0:17:45.15:0,45,693	0/0:21,0:22:53.67:0,54,792	0/0:13,0:13:35.61:0,36,517	0/0:16,0:16:45.15:0,45,691	1/1:5,17:22:51.07:519,51,0	1/1:6,27:33:66.14:702,66,0	1/1:2,12:14:36.08:383,36,0
chr10	110207173	.	C	CT	1620.55	PASS	AB=0.823;AC=25;AF=0.446;AN=56;BaseQRankSum=-2.086;DP=652;FS=10.912;HRun=15;HaplotypeScore=92.5573;InbreedingCoeff=0.2019;MQ=73.02;MQ0=0;MQRankSum=-0.377;QD=3.85;ReadPosRankSum=-3.538;VQSLOD=-0.6776;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,19:32:5.70:247,6,0	0/1:7,4:11:48.59:49,0,51	0/1:16,0:12:9.73:26,0,10	0/1:13,0:13:0.10:14,0,0	0/1:29,3:32:6.61:7,0,233	0/0:19,2:21:3.90:0,4,134	0/0:18,0:18:6.82:0,7,137	1/1:19,14:36:24.68:267,25,0	0/1:6,7:13:23.04:39,0,23	0/0:26,0:26:21.82:0,22,243	0/0:24,0:25:23.40:0,23,134	0/0:23,0:23:30.22:0,30,193	0/1:27,1:30:11.58:12,0,134	0/0:25,0:29:14.87:0,15,180	0/1:22,0:23:2.23:2,0,89	0/1:28,4:32:4.32:4,0,202	0/1:7,10:17:18.05:83,0,18	1/1:11,3:15:11.54:168,12,0	1/1:8,13:22:0.70:176,1,0	1/1:16,18:35:4.78:213,5,0	1/1:8,5:14:3:26,3,0	0/0:21,1:23:1.90:0,2,111	0/0:24,3:27:22.40:0,22,138	0/0:16,0:16:16.49:0,16,104	0/0:21,0:23:35.55:0,36,217	0/1:19,14:33:0.17:198,0,0	0/1:10,17:27:5.69:84,0,6	1/1:7,11:18:20.98:176,21,0
chr10	110208604	.	T	TGA	3777.91	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-11.286;DP=641;FS=1.539;HRun=0;HaplotypeScore=77.2515;InbreedingCoeff=0.9903;MQ=79.31;MQ0=1;MQRankSum=-0.973;QD=40.19;ReadPosRankSum=3.269;VQSLOD=5.3664;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.26:0,87,1179	0/0:7,0:7:20.92:0,21,248	0/0:24,0:22:62.80:0,63,758	0/0:20,0:20:47.17:0,47,563	1/1:2,30:31:65.94:1187,66,0	1/1:2,22:24:57.20:1026,57,0	1/1:0,17:17:36.12:647,36,0	0/0:36,0:36:99:0,99,1342	0/0:20,0:20:57.16:0,57,762	0/0:25,0:25:69.23:0,69,965	0/0:19,0:19:51.12:0,51,668	0/0:19,0:19:57.19:0,57,798	0/0:18,0:18:48.14:0,48,653	0/0:21,0:21:60.16:0,60,796	0/0:29,0:29:77.99:0,78,1062	0/0:31,0:31:90.30:0,90,1258	0/0:27,0:27:72.21:0,72,966	0/0:24,0:24:63.18:0,63,859	0/0:20,0:20:57.18:0,57,781	0/0:24,0:24:66.22:0,66,920	0/0:46,0:46:99:0,126,1723	0/0:17,0:17:45.15:0,45,628	0/0:19,0:19:51.15:0,51,686	0/0:14,0:14:42.12:0,42,570	1/1:1,20:21:51.17:917,51,0	0/0:25,0:24:63.19:0,63,850	0/0:28,0:28:78.23:0,78,1056	0/0:4,0:4:12.04:0,12,168
chr10	110209424	.	GTTTT	G	4886	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=11.304;DP=502;FS=3.489;HRun=20;HaplotypeScore=95.7574;InbreedingCoeff=0.9011;MQ=58.37;MQ0=12;MQRankSum=-2.211;QD=21.43;ReadPosRankSum=7.187;VQSLOD=2.5675;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,26:31:77.01:882,77,0	0/0:10,0:10:12.04:0,12,231	0/0:42,0:11:11.75:0,12,131	0/0:26,0:4:0:0,0,0	0/0:6,0:13:29.59:0,30,272	0/0:8,0:19:14.94:0,15,160	0/0:1,0:8:8.22:0,8,148	1/1:11,11:22:24.73:284,25,0	1/1:7,7:14:16.21:205,16,0	0/0:14,0:15:30.10:0,30,560	0/0:17,0:18:24:0,24,354	0/0:12,0:13:27.09:0,27,503	0/0:12,0:14:30.07:0,30,522	0/0:10,0:12:24.08:0,24,434	0/0:9,0:15:27.09:0,27,486	0/0:16,0:17:39.05:0,39,575	1/1:6,27:34:75.75:876,76,0	1/1:3,18:22:50.23:576,50,0	1/1:5,11:14:26.39:308,26,0	1/1:8,11:19:28.10:343,28,0	1/1:5,7:12:19.37:225,19,0	0/0:3,0:3:6.02:0,6,125	0/0:10,0:13:21.02:0,21,302	0/0:6,0:8:12.04:0,12,223	0/0:13,0:22:38.88:0,39,455	1/1:5,22:28:11.77:741,12,0	1/1:12,14:26:32.89:412,33,0	1/1:3,1:3:3.01:35,3,0
chr10	110210515	.	T	TGGTTAAGAGCACTGACTGCTCTTCCAGA	18352.12	PASS	AC=28;AF=0.519;AN=54;BaseQRankSum=-4.740;DP=386;FS=3.256;HRun=0;HaplotypeScore=170.3329;InbreedingCoeff=0.8960;MQ=47.33;MQ0=5;MQRankSum=-9.940;QD=97.62;ReadPosRankSum=-1.257;VQSLOD=4.4613;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:10:17.94:1114,18,0	0/0:5,0:5:15.02:0,15,866	0/0:25,0:12:33.09:0,33,869	0/0:21,0:14:39.13:0,39,1928	1/1:3,2:20:9.03:375,9,0	1/1:1,2:25:6.02:782,6,0	1/1:4,0:4:9.03:751,9,0	1/1:15,0:15:30.03:1005,30,0	1/1:3,0:2:6.02:467,6,0	0/0:10,0:10:30.10:0,30,2034	0/0:7,0:7:21.07:0,21,1570	0/0:19,0:19:57.18:0,57,3654	0/0:12,0:12:33.11:0,33,2419	0/0:9,0:9:27.09:0,27,1928	0/0:18,0:18:45.15:0,45,2969	0/0:18,0:18:48.15:0,48,2926	1/1:0,2:8:6.02:783,6,0	1/1:0,1:8:3.01:392,3,0	1/1:7,0:6:14.96:712,15,0	1/1:0,3:17:15.05:1625,15,0	./.	0/0:13,0:13:39.12:0,39,2103	0/0:19,0:19:57.18:0,57,3632	0/0:20,0:20:53.92:0,54,3577	1/1:1,7:23:18.06:2347,18,0	1/1:0,5:15:39.09:2904,39,0	1/1:1,10:19:32.47:3922,32,0	1/1:0,3:9:9.03:1174,9,0
chr10	110210648	.	TG	T	6204.61	PASS	AB=0.979;AC=24;AF=0.429;AN=56;BaseQRankSum=4.371;DP=451;FS=20.119;HRun=2;HaplotypeScore=44.6146;InbreedingCoeff=0.7998;MQ=57.47;MQ0=1;MQRankSum=-2.439;QD=26.40;ReadPosRankSum=1.238;VQSLOD=3.1164;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:32:63.20:813,63,0	0/0:8,0:8:24.05:0,24,301	0/0:7,0:5:15.05:0,15,213	0/0:10,0:7:18.04:0,18,235	0/1:22,1:23:15.76:16,0,87	0/0:14,0:13:5.90:0,6,63	0/0:17,0:17:5.10:0,5,98	1/1:0,36:36:99:1265,105,0	1/1:0,14:13:33.11:424,33,0	0/0:23,0:23:55.28:0,55,862	0/0:26,0:26:71.74:0,72,900	0/0:22,0:22:63.10:0,63,839	0/0:12,0:12:36.12:0,36,537	0/0:14,0:14:39.12:0,39,562	0/0:15,0:15:45.14:0,45,652	0/0:14,0:14:39.12:0,39,564	1/1:0,22:22:63.20:812,63,0	1/1:0,16:15:36.12:464,36,0	1/1:1,19:20:50.62:592,51,0	1/1:0,11:11:27.09:349,27,0	1/1:1,9:10:24.08:310,24,0	0/0:11,0:11:32.12:0,32,416	0/0:12,0:12:36:0,36,488	0/0:11,0:11:33.03:0,33,465	0/1:12,0:12:15.15:15,0,43	1/1:1,21:20:9.25:582,9,0	1/1:1,13:14:39.09:484,39,0	1/1:0,2:2:6.02:78,6,0
chr10	110210924	.	GA	G	5265.79	PASS	AB=0.733;AC=29;AF=0.518;AN=56;BaseQRankSum=7.661;DP=531;FS=0.379;HRun=10;HaplotypeScore=55.0496;InbreedingCoeff=0.6920;MQ=55.86;MQ0=14;MQRankSum=0.323;QD=15.09;ReadPosRankSum=1.949;VQSLOD=5.0281;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,32:39:83.97:729,84,0	0/0:6,0:6:15.04:0,15,166	0/1:25,1:9:7.13:7,0,121	0/1:23,1:9:24.99:25,0,40	1/1:4,22:25:50.35:425,50,0	1/1:2,14:16:38.99:339,39,0	1/1:5,13:18:32.99:286,33,0	0/1:4,13:17:1.19:214,0,1	0/1:3,8:11:6.19:181,0,6	0/0:18,1:19:22.06:0,22,455	0/0:15,0:16:30:0,30,316	0/0:18,1:20:18.83:0,19,383	0/0:15,0:16:35.91:0,36,368	0/0:20,0:20:56.90:0,57,585	0/0:15,0:16:47.96:0,48,512	0/0:21,0:21:57.15:0,57,623	1/1:4,34:38:71.98:625,72,0	1/1:2,11:13:26.99:234,27,0	0/1:8,11:19:27.42:240,0,27	1/1:4,12:16:23.98:208,24,0	1/1:1,11:12:32.99:286,33,0	0/0:12,0:11:30.08:0,30,332	0/0:17,0:17:39.09:0,39,423	0/0:19,0:19:51.12:0,51,550	1/1:2,12:13:23.99:208,24,0	1/1:2,21:22:59.65:502,60,0	1/1:1,27:28:71.98:625,72,0	1/1:0,5:5:15:130,15,0
chr10	110211628	.	AGTGTGTGT	A	5624.64	PASS	AB=0.692;AC=21;AF=0.375;AN=56;BaseQRankSum=12.635;DP=726;FS=0.000;HRun=0;HaplotypeScore=187.9849;InbreedingCoeff=0.8834;MQ=64.22;MQ0=7;MQRankSum=-8.782;QD=21.63;ReadPosRankSum=1.535;VQSLOD=3.7177;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,15:35:99:661,0,188	0/0:7,0:7:12.04:0,12,419	0/0:34,0:20:21.07:0,21,590	0/0:44,0:31:16.79:0,17,487	0/0:23,0:23:38.97:0,39,1511	0/0:15,0:17:27.08:0,27,887	0/0:30,0:31:54.17:0,54,2008	1/1:17,12:29:35.97:519,36,0	1/1:8,7:16:21.07:515,21,0	0/0:35,0:36:74.43:0,74,2289	0/0:20,0:20:36.09:0,36,1225	0/0:20,0:22:39.09:0,39,1212	0/0:23,0:23:33.10:0,33,1265	0/0:21,0:22:39.11:0,39,1277	0/0:30,0:33:63.19:0,63,2263	0/0:35,0:37:78.23:0,78,2752	1/1:13,6:19:15.03:330,15,0	1/1:7,8:15:15.05:383,15,0	1/1:11,3:15:8.99:152,9,0	1/1:11,13:24:15.05:383,15,0	1/1:30,7:37:6.02:132,6,0	0/0:25,0:28:60.19:0,60,2017	0/0:22,0:23:24.05:0,24,795	0/0:29,0:36:81.26:0,81,2819	0/0:24,0:25:48.12:0,48,1448	1/1:16,14:30:39.58:887,40,0	1/1:6,17:23:48.16:1224,48,0	1/1:5,8:14:18.06:439,18,0
chr10	110212012	.	CTGTGTGTGTGTG	C	1313.37	PASS	AB=0.988;AC=17;AF=0.370;AN=46;BaseQRankSum=0.673;DP=562;FS=25.103;HRun=0;HaplotypeScore=160.8858;InbreedingCoeff=0.0834;MQ=41.16;MQ0=43;MQRankSum=1.859;QD=4.99;ReadPosRankSum=-0.513;VQSLOD=0.9256;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:34:1.79:0,2,95	0/0:10,0:9:6.28:0,6,104	./.	./.	1/1:14,0:12:5.78:63,6,0	0/1:22,0:20:17.04:101,0,17	0/1:25,0:19:12.10:16,0,12	./.	1/1:21,0:21:2.33:91,2,0	0/0:28,0:26:38.81:0,39,687	0/0:11,0:10:0:0,0,0	1/1:34,0:31:12.04:271,12,0	0/1:11,0:11:26.41:64,0,26	0/0:16,5:20:2.88:0,3,15	0/0:14,1:18:2.59:0,3,40	0/1:21,0:20:28.28:28,0,237	0/0:34,0:29:2.70:0,3,6	0/0:28,0:22:0:0,0,0	0/0:20,0:15:3.39:0,3,10	0/1:18,1:17:18.12:18,0,110	1/1:25,0:19:4.97:147,5,0	./.	./.	0/1:36,0:35:2.03:324,0,2	0/0:20,0:20:2.97:0,3,136	1/1:15,3:18:9.03:297,9,0	0/0:21,0:20:0:0,0,0	0/1:13,0:13:6.99:22,0,7
chr10	110213262	.	C	CCCT	9738.16	PASS	AB=0.522;AC=29;AF=0.518;AN=56;BaseQRankSum=8.045;DP=546;FS=6.113;HRun=0;HaplotypeScore=96.3881;InbreedingCoeff=0.9181;MQ=76.11;MQ0=2;MQRankSum=-1.819;QD=29.16;ReadPosRankSum=0.554;VQSLOD=4.7091;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:30:30.37:393,30,0	0/0:9,0:9:27.09:0,27,440	0/0:12,0:12:23.87:0,24,367	0/0:26,0:24:43.37:0,43,553	1/1:2,27:29:72.25:1626,72,0	1/1:1,22:23:51.18:1130,51,0	1/1:0,21:22:57.20:1261,57,0	1/1:3,0:28:69.57:642,70,0	1/1:2,0:17:13.14:282,13,0	0/0:17,0:17:51.17:0,51,829	0/0:18,0:18:54.15:0,54,807	0/0:19,0:19:57.17:0,57,877	0/0:15,0:15:45.11:0,45,704	0/0:19,0:19:57.19:0,57,923	0/0:19,0:19:54.16:0,54,832	0/0:13,0:13:39.12:0,39,606	1/1:0,0:25:50.88:410,51,0	1/1:0,0:27:74.82:603,75,0	1/1:3,0:30:86.84:743,87,0	1/1:1,0:21:53.86:451,54,0	1/1:3,0:13:9.96:197,10,0	0/0:15,0:15:45.11:0,45,681	0/0:14,0:14:42.13:0,42,659	0/0:16,0:16:48.11:0,48,707	1/1:0,16:17:45.15:1009,45,0	0/1:2,0:24:25.82:492,0,26	1/1:2,0:15:32.26:289,32,0	1/1:1,0:9:26.87:210,27,0
chr10	110213922	.	TG	T	2443.93	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=0.594;DP=476;FS=0.467;HRun=3;HaplotypeScore=70.0512;InbreedingCoeff=0.9351;MQ=58.60;MQ0=24;MQRankSum=0.869;QD=10.31;ReadPosRankSum=-0.159;VQSLOD=1.0841;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,2:17:34.99:268,35,0	0/0:7,0:6:11.73:0,12,77	0/0:49,0:15:25.98:0,26,260	0/0:26,0:11:7.39:0,7,144	1/1:26,0:26:31.43:235,31,0	1/1:9,1:10:20.26:181,20,0	1/1:15,0:15:19.30:144,19,0	1/1:7,14:22:16.50:313,17,0	1/1:10,0:11:11.96:84,12,0	0/0:30,0:27:56.89:0,57,506	0/0:14,0:14:26.71:0,27,236	0/0:18,0:18:27.47:0,27,245	0/0:10,0:9:20.71:0,21,155	0/0:17,0:15:27.02:0,27,200	0/0:13,0:13:24:0,24,219	0/0:15,0:14:28.07:0,28,200	1/1:14,0:13:24.21:157,24,0	1/1:14,0:12:10.49:62,10,0	1/1:13,0:12:24.39:200,24,0	1/1:14,1:15:33.36:227,33,0	1/1:12,0:13:14.72:125,15,0	0/0:11,0:11:19.97:0,20,174	0/0:18,0:19:40.59:0,41,364	0/0:10,0:8:11.54:0,12,100	1/1:10,0:8:14.21:107,14,0	1/1:8,15:23:30.42:311,30,0	1/1:29,0:28:37.48:251,37,0	1/1:4,0:2:0.89:2,1,0
chr10	110214754	.	C	CACAT	2718.22	PASS	AB=0.906;AC=14;AF=0.250;AN=56;BaseQRankSum=2.454;DP=980;FS=2.089;HRun=0;HaplotypeScore=193.2866;InbreedingCoeff=0.1020;MQ=54.37;MQ0=8;MQRankSum=-0.036;QD=6.38;ReadPosRankSum=7.059;VQSLOD=1.8390;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:58,0:56:32.76:33,0,394	0/0:14,0:14:42.05:0,42,526	0/0:22,0:11:23.72:0,24,185	0/0:27,0:6:9.02:0,9,94	1/1:8,22:32:36.02:720,36,0	0/1:3,22:27:6.45:268,0,6	1/1:1,20:21:22.63:568,23,0	0/0:40,0:40:68.89:0,69,614	0/0:38,0:38:53.27:0,53,534	0/0:46,0:45:99:0,100,1159	0/0:17,0:17:45.04:0,45,538	0/0:34,0:34:95.16:0,95,1260	0/0:45,0:45:99:0,108,1331	0/0:38,0:38:80.18:0,80,1299	0/0:57,0:57:99:0,150,1996	0/0:42,0:42:99:0,102,1632	0/1:39,0:39:99:151,0,277	0/1:27,0:26:4.12:4,0,245	0/0:26,0:25:47.64:0,48,470	0/1:33,0:32:40.47:40,0,248	0/1:77,0:76:32.39:32,0,490	0/0:34,0:34:71.79:0,72,1120	0/0:23,0:23:59.82:0,60,776	0/0:51,0:51:99:0,145,2006	0/1:3,23:26:7.46:617,0,7	0/1:46,0:44:99:142,0,391	0/1:25,0:26:99:281,0,130	0/1:13,0:13:27.56:28,0,161
chr10	110216161	.	A	AG	1598.83	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=2.190;DP=503;FS=3.638;HRun=5;HaplotypeScore=96.4626;InbreedingCoeff=0.9751;MQ=69.88;MQ0=10;MQRankSum=-1.508;QD=23.86;ReadPosRankSum=-1.813;VQSLOD=1.8942;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:62.96:0,63,370	0/0:3,0:3:9.02:0,9,97	0/0:26,0:18:44.97:0,45,456	0/0:42,0:30:84:0,84,870	1/1:5,7:12:24.07:290,24,0	1/1:3,17:19:42.97:505,43,0	1/1:2,17:19:39.12:494,39,0	0/0:20,0:19:18.86:0,19,156	0/0:17,0:17:40.44:0,40,259	0/0:12,0:12:33.08:0,33,349	0/0:9,0:9:24.06:0,24,257	0/0:20,0:20:51.11:0,51,535	0/0:11,0:11:33.08:0,33,354	0/0:10,0:10:30.08:0,30,322	0/0:22,0:22:48.02:0,48,508	0/0:15,0:15:33.06:0,33,338	0/0:21,0:21:49.98:0,50,315	0/0:26,0:24:55.63:0,56,340	0/0:14,0:14:37.58:0,38,208	0/0:14,0:14:28.17:0,28,189	0/0:38,0:38:85.06:0,85,503	0/0:13,0:13:36.09:0,36,386	0/0:11,0:11:33.08:0,33,353	0/0:23,0:23:60.09:0,60,622	1/1:3,13:16:38.27:470,38,0	0/0:20,0:20:29.27:0,29,241	0/0:15,0:15:30.51:0,31,193	0/0:6,0:6:14.53:0,15,80
chr10	110217532	.	C	CT	1953.26	PASS	AB=0.859;AC=32;AF=0.571;AN=56;BaseQRankSum=0.785;DP=528;FS=7.697;HRun=14;HaplotypeScore=95.8916;InbreedingCoeff=0.3937;MQ=74.87;MQ0=9;MQRankSum=-2.191;QD=5.09;ReadPosRankSum=-1.496;VQSLOD=1.9247;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,25:40:45.83:354,46,0	0/1:11,1:12:8.72:9,0,78	0/1:22,0:16:16.19:17,0,16	0/1:21,0:18:13.17:13,0,37	1/1:15,0:14:4.40:14,4,0	1/1:18,0:17:13.48:73,13,0	1/1:10,0:9:0.88:2,1,0	0/1:19,9:26:21.97:166,0,22	1/1:6,10:16:19.61:182,20,0	0/0:15,1:16:2.55:0,3,101	0/0:15,0:19:28.67:0,29,158	0/0:17,0:16:29.29:0,29,188	0/1:12,0:13:1.70:2,0,91	0/0:14,0:13:23.86:0,24,140	0/0:18,0:21:29.62:0,30,171	0/0:13,1:17:9.85:0,10,166	1/1:11,18:29:39.50:366,40,0	0/1:9,14:22:35.21:176,0,35	1/1:12,11:24:30.36:226,30,0	1/1:9,8:18:16.22:113,16,0	0/1:6,6:10:10.27:44,0,10	0/0:12,0:12:17.61:0,18,115	0/1:14,2:18:5:5,0,85	0/0:26,0:27:29.43:0,29,196	1/1:15,0:15:8.76:54,9,0	1/1:8,8:16:15.38:115,15,0	1/1:15,12:27:13.17:95,13,0	1/1:1,4:6:14.84:120,15,0
chr10	110217843	.	G	GCGTAGCCCAGAA	8051.98	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-6.311;DP=627;FS=1.190;HRun=0;HaplotypeScore=198.3096;InbreedingCoeff=0.9891;MQ=78.16;MQ0=0;MQRankSum=-10.880;QD=98.19;ReadPosRankSum=-0.510;VQSLOD=4.8623;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:84.27:0,84,3150	0/0:5,0:5:15.05:0,15,536	0/0:13,0:14:36.12:0,36,1114	0/0:15,0:15:35.98:0,36,854	1/1:3,7:13:27.06:1404,27,0	1/1:4,10:18:39.13:2226,39,0	1/1:7,14:39:51.18:3045,51,0	0/0:19,0:19:57.20:0,57,1768	0/0:18,0:18:54.17:0,54,1924	0/0:20,0:20:57.18:0,57,1744	0/0:7,0:7:21.07:0,21,726	0/0:36,0:36:99:0,108,4149	0/0:24,0:24:72.25:0,72,2702	0/0:28,0:28:84.29:0,84,3159	0/0:22,0:22:66.23:0,66,2438	0/0:22,0:21:63.22:0,63,2211	0/0:30,0:30:90.24:0,90,3165	0/0:30,0:30:90.31:0,90,3263	0/0:26,0:26:75.22:0,75,2058	0/0:20,0:20:60.21:0,60,1961	0/0:56,0:56:99:0,169,6038	0/0:14,0:14:39.12:0,39,1345	0/0:13,0:13:33.11:0,33,1141	0/0:30,0:30:87.30:0,87,3151	1/1:2,6:12:24.08:1376,24,0	0/0:24,0:24:66.21:0,66,2187	0/0:35,0:35:99:0,102,3608	0/0:6,0:6:15.05:0,15,579
chr10	110218290	.	TTGTTTG	T	4607.87	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.653;DP=584;FS=9.971;HRun=0;HaplotypeScore=137.9063;InbreedingCoeff=0.9929;MQ=69.98;MQ0=8;MQRankSum=-10.564;QD=62.27;ReadPosRankSum=0.291;VQSLOD=4.9324;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.26:0,75,2567	0/0:8,0:8:18.06:0,18,624	0/0:34,0:20:34.38:0,34,928	0/0:33,0:18:15:0,15,799	1/1:2,17:19:54.19:1174,54,0	1/1:1,13:14:42.14:945,42,0	1/1:5,10:15:42.14:885,42,0	0/0:20,0:20:54.18:0,54,1521	0/0:11,0:11:33.11:0,33,1065	0/0:32,0:32:90.31:0,90,2921	0/0:27,0:27:78.25:0,78,2516	0/0:12,0:12:33.11:0,33,1125	0/0:13,0:13:39.13:0,39,1151	0/0:20,0:20:54.17:0,54,1689	0/0:13,0:13:36.11:0,36,1118	0/0:24,0:24:69.22:0,69,2231	0/0:31,0:31:78.25:0,78,2379	0/0:17,0:17:51.18:0,51,1746	0/0:20,0:20:45.15:0,45,1295	0/0:32,0:32:84.29:0,84,2725	0/0:12,0:12:33.11:0,33,881	0/0:16,0:16:36.11:0,36,1054	0/0:20,0:20:60.21:0,60,1949	0/0:17,0:17:51.17:0,51,1623	1/1:2,24:26:75.26:1604,75,0	0/0:26,0:26:72.23:0,72,2300	0/0:20,0:20:54.17:0,54,1729	0/0:20,0:19:57.20:0,57,1915
chr10	110218294	.	TTG	T	1690.42	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.887;DP=605;FS=11.183;HRun=0;HaplotypeScore=103.3137;InbreedingCoeff=0.9962;MQ=67.71;MQ0=9;MQRankSum=-11.809;QD=23.16;ReadPosRankSum=1.129;VQSLOD=4.1829;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.31:0,90,1615	0/0:6,0:6:18.06:0,18,330	0/0:36,0:19:34.65:0,35,667	0/0:41,0:19:20.39:0,20,542	1/1:19,0:19:53.83:470,54,0	1/1:14,0:14:38.94:322,39,0	1/1:12,2:14:41.20:376,41,0	0/0:25,0:25:72.23:0,72,1204	0/0:13,0:13:39.12:0,39,675	0/0:33,0:33:93.32:0,93,1675	0/0:27,0:27:81.26:0,81,1440	0/0:12,0:12:36.12:0,36,645	0/0:14,0:14:42.13:0,42,707	0/0:19,0:19:54.17:0,54,947	0/0:12,0:12:36.11:0,36,619	0/0:26,0:26:75.23:0,75,1313	0/0:32,0:32:90.26:0,90,1526	0/0:18,0:18:54.14:0,54,955	0/0:24,0:23:54.18:0,54,911	0/0:34,0:34:90.31:0,90,1626	0/0:11,0:11:33.11:0,33,560	0/0:13,0:13:36.11:0,36,610	0/0:21,0:21:63.22:0,63,1129	0/0:17,0:17:51.17:0,51,913	1/1:24,2:26:74.91:683,75,0	0/0:25,0:25:72.23:0,72,1264	0/0:20,0:20:54.17:0,54,947	0/0:21,0:20:60.21:0,60,1099
chr10	110218311	.	G	GT	2947.07	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=14.306;DP=625;FS=14.424;HRun=4;HaplotypeScore=94.1420;InbreedingCoeff=0.8853;MQ=58.18;MQ0=10;MQRankSum=-13.201;QD=21.67;ReadPosRankSum=0.036;VQSLOD=2.1414;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1136	0/0:8,0:8:24.07:0,24,272	0/0:32,0:12:10.81:0,11,243	0/1:40,0:15:5.32:5,0,222	1/1:2,21:23:63.13:798,63,0	1/1:3,19:21:54.18:733,54,0	1/1:7,16:23:54.17:716,54,0	0/0:25,0:25:66.18:0,66,740	0/0:14,0:14:36.10:0,36,408	0/0:34,0:34:92.28:0,92,1020	0/0:26,0:26:78.21:0,78,875	0/0:15,0:15:42.12:0,42,476	0/0:12,0:12:33.09:0,33,374	0/0:16,0:15:45.13:0,45,510	0/0:16,0:16:48.14:0,48,544	0/0:23,0:23:66.16:0,66,736	0/0:32,0:32:90.26:0,90,1020	0/0:23,0:23:63.18:0,63,713	0/0:24,0:23:58.34:0,58,615	0/0:31,0:31:93.25:0,93,1042	0/0:11,0:11:33.09:0,33,374	0/0:13,0:13:39.10:0,39,432	0/0:20,0:20:57.16:0,57,646	0/0:16,0:16:48.12:0,48,534	1/1:5,22:27:66.19:857,66,0	0/0:23,0:23:60.17:0,60,680	0/0:22,0:22:66.12:0,66,714	0/0:19,0:18:51.15:0,51,578
chr10	110218329	.	GT	G	1299.90	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=14.222;DP=602;FS=2.113;HRun=6;HaplotypeScore=93.9901;InbreedingCoeff=0.9952;MQ=61.25;MQ0=3;MQRankSum=-11.005;QD=14.77;ReadPosRankSum=0.529;VQSLOD=3.3044;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1481	0/0:6,0:6:18.06:0,18,246	0/0:21,0:15:34.78:0,35,455	0/0:30,0:14:17.77:0,18,208	1/1:22,4:26:64.19:432,64,0	1/1:20,1:19:52.08:294,52,0	1/1:19,4:23:61.18:408,61,0	0/0:29,0:29:81.25:0,81,1078	0/0:13,0:13:39.13:0,39,532	0/0:28,0:28:81.27:0,81,1106	0/0:27,0:27:78.26:0,78,1063	0/0:12,0:12:33.11:0,33,450	0/0:16,0:16:48.16:0,48,652	0/0:17,0:16:39.13:0,39,533	0/0:22,0:22:63.21:0,63,858	0/0:19,0:19:57.19:0,57,779	0/0:39,0:39:99:0,111,1497	0/0:21,0:21:60.12:0,60,764	0/0:20,0:20:51.15:0,51,660	0/0:29,0:29:81.27:0,81,1105	0/0:16,0:16:45.15:0,45,614	0/0:15,0:15:39.12:0,39,518	0/0:19,0:19:54.17:0,54,720	0/0:19,0:19:51.17:0,51,697	1/1:15,3:18:52.11:326,52,0	0/0:22,0:22:63.21:0,63,860	0/0:20,0:20:57.19:0,57,778	0/0:16,0:16:48.16:0,48,655
chr10	110218333	.	T	TG	3054.05	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=14.274;DP=601;FS=2.714;HRun=0;HaplotypeScore=86.9014;InbreedingCoeff=0.9967;MQ=66.37;MQ0=3;MQRankSum=-11.475;QD=35.10;ReadPosRankSum=0.625;VQSLOD=3.3494;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,1565	0/0:6,0:6:18.06:0,18,252	0/0:23,0:17:40.67:0,41,549	0/0:27,0:14:21.96:0,22,261	1/1:4,22:26:65.46:871,65,0	1/1:1,18:18:53.92:790,54,0	1/1:4,19:23:62.31:829,62,0	0/0:32,0:32:93.26:0,93,1208	0/0:14,0:14:39.13:0,39,545	0/0:28,0:28:81.27:0,81,1126	0/0:27,0:27:78.26:0,78,1081	0/0:11,0:11:33.11:0,33,458	0/0:16,0:16:48.16:0,48,671	0/0:14,0:13:39.13:0,39,545	0/0:23,0:23:66.21:0,66,902	0/0:19,0:19:57.19:0,57,797	0/0:38,0:38:99:0,111,1532	0/0:21,0:21:60.14:0,60,783	0/0:18,0:18:54.15:0,54,706	0/0:28,0:28:84.27:0,84,1159	0/0:17,0:17:48.15:0,48,655	0/0:17,0:17:50.96:0,51,622	0/0:18,0:18:54.18:0,54,754	0/0:19,0:19:54.17:0,54,735	1/1:3,16:19:53.39:724,53,0	0/0:21,0:21:63.21:0,63,877	0/0:20,0:20:60.19:0,60,816	0/0:16,0:16:48.16:0,48,671
chr10	110219069	.	AAG	A	2989.02	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=12.030;DP=599;FS=9.030;HRun=0;HaplotypeScore=83.0826;InbreedingCoeff=0.8353;MQ=72.41;MQ0=2;MQRankSum=-0.869;QD=21.35;ReadPosRankSum=-0.392;VQSLOD=3.1296;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:91.23:0,91,1566	0/0:7,0:7:21.06:0,21,324	0/1:26,0:15:0.79:1,0,288	0/1:29,0:20:4.10:4,0,308	1/1:8,18:26:72.22:976,72,0	1/1:5,16:21:54.17:743,54,0	1/1:4,6:10:30.09:401,30,0	0/0:32,0:32:67.84:0,68,1177	0/0:13,0:13:39.13:0,39,694	0/0:26,0:26:78.27:0,78,1373	0/0:32,0:32:96.32:0,96,1677	0/0:16,0:16:39.12:0,39,669	0/0:17,0:17:48.16:0,48,839	0/0:12,0:12:36.12:0,36,617	0/0:12,0:12:36.11:0,36,600	0/0:17,0:17:48.16:0,48,854	0/0:31,0:31:81.25:0,81,1374	0/0:16,0:16:48.04:0,48,778	0/0:23,0:23:60.18:0,60,967	0/0:25,0:25:75.24:0,75,1289	0/0:18,0:18:54.10:0,54,831	0/0:14,0:14:39.08:0,39,662	0/0:30,0:30:84.06:0,84,1392	0/0:22,0:22:66.21:0,66,1146	1/1:9,19:28:75.24:1024,75,0	0/0:19,0:18:54.14:0,54,819	0/0:29,0:29:81.26:0,81,1400	0/0:15,0:15:45.14:0,45,774
chr10	110219076	.	GA	G	1570.34	PASS	AB=0.875;AC=9;AF=0.161;AN=56;BaseQRankSum=12.264;DP=591;FS=5.060;HRun=10;HaplotypeScore=77.1323;InbreedingCoeff=0.8449;MQ=71.21;MQ0=2;MQRankSum=-1.619;QD=18.69;ReadPosRankSum=1.078;VQSLOD=4.4768;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:74.23:0,74,768	0/1:5,1:7:6.93:7,0,131	0/0:26,0:15:24.31:0,24,262	0/0:26,0:17:18.84:0,19,144	1/1:1,21:23:62.98:543,63,0	1/1:0,18:18:47.99:416,48,0	1/1:2,7:9:20.95:174,21,0	0/0:24,2:26:5.03:0,5,491	0/0:15,0:15:42.09:0,42,449	0/0:31,0:31:70.41:0,70,740	0/0:34,0:34:87.15:0,87,910	0/0:13,0:13:39.10:0,39,424	0/0:17,0:17:48.10:0,48,514	0/0:11,0:12:32.89:0,33,322	0/0:13,0:13:30.02:0,30,316	0/0:17,0:17:39.10:0,39,424	0/0:27,0:27:66.14:0,66,711	0/0:18,0:18:50.99:0,51,535	0/0:20,0:20:48.04:0,48,508	0/0:27,1:28:52.14:0,52,789	0/0:18,0:19:53.96:0,54,569	0/0:15,0:15:42.06:0,42,444	0/0:28,0:28:78.20:0,78,855	0/0:23,0:23:63.17:0,63,697	1/1:3,24:27:68.97:593,69,0	0/0:21,1:21:28.12:0,28,531	0/0:27,0:27:63.03:0,63,667	0/0:14,1:15:10:0,10,318
chr10	110219212	.	TTTTG	T	6022.11	PASS	AB=0.933;AC=29;AF=0.518;AN=56;BaseQRankSum=15.752;DP=600;FS=20.854;HRun=0;HaplotypeScore=109.2386;InbreedingCoeff=0.9287;MQ=62.09;MQ0=2;MQRankSum=-1.181;QD=17.35;ReadPosRankSum=0.682;VQSLOD=2.7629;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:52.97:331,53,0	0/0:14,0:14:42.14:0,42,873	0/0:26,0:14:30.56:0,31,421	0/0:20,0:13:28.37:0,28,434	1/1:2,27:29:74.75:1030,75,0	1/1:1,18:19:45.15:814,45,0	1/1:0,16:16:36.12:673,36,0	1/1:32,2:34:49.78:409,50,0	1/1:14,0:14:16.89:96,17,0	0/0:30,0:30:80.94:0,81,1889	0/0:17,0:17:51.17:0,51,1040	0/0:16,0:16:48.16:0,48,943	0/0:18,0:18:48.15:0,48,1034	0/0:14,0:14:39.11:0,39,786	0/0:20,0:20:54.17:0,54,1065	0/0:29,0:29:84.26:0,84,1767	1/1:20,1:21:47.14:331,47,0	1/1:19,0:19:43.49:263,43,0	1/1:15,0:14:38.23:243,38,0	1/1:27,0:27:60.96:351,61,0	1/1:14,0:14:26.48:165,26,0	0/0:22,0:22:66.19:0,66,1491	0/0:9,0:9:24.07:0,24,528	0/0:17,0:17:48.16:0,48,1159	1/1:2,21:23:29.97:465,30,0	0/1:26,2:26:13.62:347,0,14	1/1:32,0:32:62.85:375,63,0	1/1:27,0:27:20.59:129,21,0
chr10	110219213	.	TTTG	T	9177.79	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=14.440;DP=598;FS=20.423;HRun=0;HaplotypeScore=87.8948;InbreedingCoeff=0.9853;MQ=62.16;MQ0=2;MQRankSum=-2.541;QD=26.76;ReadPosRankSum=0.398;VQSLOD=3.2765;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:54.10:842,54,0	0/0:14,0:14:42.14:0,42,777	0/0:26,0:14:30.57:0,31,396	0/0:21,0:14:22.15:0,22,383	1/1:29,0:29:70.31:540,70,0	1/1:18,0:18:44.88:445,45,0	1/1:16,0:16:36.09:377,36,0	1/1:10,24:34:66.68:710,67,0	1/1:1,13:14:18.06:283,18,0	0/0:30,0:30:82.90:0,83,1650	0/0:17,0:17:51.17:0,51,915	0/0:16,0:16:48.16:0,48,857	0/0:18,0:18:48.15:0,48,901	0/0:14,0:14:38.61:0,39,662	0/0:20,0:20:57.16:0,57,988	0/0:31,0:31:90.24:0,90,1621	1/1:1,19:20:48.16:787,48,0	1/1:1,18:19:48.03:753,48,0	1/1:2,13:14:39.10:593,39,0	1/1:2,24:26:72.32:980,72,0	1/1:1,13:14:27.09:453,27,0	0/0:22,0:22:66.19:0,66,1262	0/0:9,0:9:24.07:0,24,466	0/0:17,0:17:48.16:0,48,967	1/1:23,0:23:28.57:234,29,0	1/1:4,24:26:6.85:740,7,0	1/1:0,32:32:66.22:1073,66,0	1/1:2,25:27:23.95:367,24,0
chr10	110219214	.	TTG	T	5876.28	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=16.820;DP=593;FS=20.048;HRun=0;HaplotypeScore=88.6829;InbreedingCoeff=0.9960;MQ=60.49;MQ0=3;MQRankSum=-2.080;QD=17.33;ReadPosRankSum=0.526;VQSLOD=2.7643;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,1:27:53.95:471,54,0	0/0:15,0:15:45.05:0,45,703	0/0:24,0:12:30.06:0,30,359	0/0:21,0:14:17.99:0,18,299	1/1:29,0:29:68.21:463,68,0	1/1:18,0:18:44.28:358,44,0	1/1:16,0:16:35.98:307,36,0	1/1:30,2:32:67.83:601,68,0	1/1:13,0:13:17.87:145,18,0	0/0:30,0:30:89.76:0,90,1396	0/0:18,0:18:54.10:0,54,796	0/0:16,0:16:48.15:0,48,757	0/0:17,0:17:48.13:0,48,755	0/0:13,0:13:30.02:0,30,564	0/0:19,0:19:57.17:0,57,878	0/0:31,0:31:90.25:0,90,1404	1/1:20,0:20:48.02:432,48,0	1/1:18,1:19:47.77:436,48,0	1/1:15,0:13:39:346,39,0	1/1:24,2:26:71.93:548,72,0	1/1:13,1:14:27.01:244,27,0	0/0:23,0:23:69.18:0,69,1045	0/0:10,0:10:27.06:0,27,415	0/0:17,0:17:48.14:0,48,770	1/1:23,0:23:31.11:235,31,0	1/1:27,1:26:18.69:493,19,0	1/1:32,0:32:65.71:563,66,0	1/1:25,2:27:24.02:235,24,0
chr10	110219609	.	T	TTTC	2156.11	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-4.351;DP=354;FS=5.102;HRun=0;HaplotypeScore=65.1315;InbreedingCoeff=0.8582;MQ=84.29;MQ0=0;MQRankSum=-0.940;QD=23.96;ReadPosRankSum=-1.996;VQSLOD=2.7859;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,11:14:12.04:253,12,0	0/0:11,0:11:17.87:0,18,246	0/0:22,0:19:46.87:0,47,541	0/0:20,0:20:50.71:0,51,605	0/0:9,0:9:18:0,18,185	0/0:20,0:20:1.23:0,1,20	0/0:21,0:21:14.45:0,14,160	1/1:12,0:12:24.07:364,24,0	1/1:0,3:3:9.03:210,9,0	0/0:18,0:18:54.17:0,54,804	0/0:11,0:11:21.03:0,21,274	0/0:18,0:18:41.83:0,42,605	0/0:18,0:18:45.13:0,45,623	0/0:10,0:10:27.08:0,27,378	0/0:24,0:24:63.19:0,63,889	0/0:13,0:13:27.09:0,27,406	1/1:1,7:10:6.02:126,6,0	1/1:1,3:5:3.01:42,3,0	1/1:7,0:7:15.05:266,15,0	1/1:1,8:10:18.45:233,18,0	1/1:1,2:4:0.89:2,1,0	0/0:14,0:14:30.09:0,30,415	0/0:9,0:9:21.07:0,21,320	0/0:18,0:18:42.14:0,42,598	0/0:8,0:8:14.72:0,15,162	1/1:1,6:9:24.04:353,24,0	1/1:0,7:8:18.06:368,18,0	1/1:1,5:8:6.02:141,6,0
chr10	110220372	.	A	ATTTC	1610.03	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=6.377;DP=404;FS=0.847;HRun=0;HaplotypeScore=68.0588;InbreedingCoeff=0.8335;MQ=89.43;MQ0=0;MQRankSum=-5.606;QD=35.78;ReadPosRankSum=-0.958;VQSLOD=3.2444;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:63.19:0,63,1091	0/0:8,0:8:24.08:0,24,427	0/1:14,0:14:12.42:12,0,501	0/0:18,0:19:38.39:0,38,586	1/1:4,4:9:18.06:441,18,0	1/1:0,8:8:24.08:618,24,0	1/1:1,1:4:6.02:154,6,0	0/0:20,0:20:48.14:0,48,801	0/0:17,0:17:42.13:0,42,709	0/0:16,0:16:45.15:0,45,797	0/0:14,0:15:42.14:0,42,718	0/0:12,0:12:36.12:0,36,641	0/0:9,0:9:27.09:0,27,480	0/0:8,0:8:21.07:0,21,373	0/0:10,0:10:27.08:0,27,452	0/0:23,0:23:60.21:0,60,1054	0/0:34,0:34:99:0,102,1791	0/0:7,0:7:15.05:0,15,258	0/0:26,0:26:63.22:0,63,1100	0/0:14,0:13:42.14:0,42,748	0/0:25,0:25:69.24:0,69,1229	0/0:13,0:13:33.11:0,33,578	0/0:8,0:8:24.08:0,24,427	0/0:13,0:13:39.12:0,39,663	1/1:2,7:10:21.07:541,21,0	0/0:11,0:11:33.11:0,33,588	0/0:16,0:16:42.14:0,42,721	0/0:7,0:7:21.07:0,21,374
chr10	110220806	.	AT	A	1348.49	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.825;DP=539;FS=1.065;HRun=10;HaplotypeScore=60.7560;InbreedingCoeff=0.9884;MQ=62.53;MQ0=0;MQRankSum=-3.886;QD=17.29;ReadPosRankSum=0.706;VQSLOD=4.2371;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.11:0,42,465	0/0:12,0:12:30.06:0,30,321	0/0:15,0:13:19.62:0,20,209	0/0:11,0:11:15.41:0,15,149	1/1:3,17:20:35.97:311,36,0	1/1:3,22:25:62.98:547,63,0	1/1:3,17:20:41.98:365,42,0	0/0:38,1:40:70.51:0,71,985	0/0:18,0:18:45.08:0,45,477	0/0:20,0:20:42.11:0,42,463	0/0:24,0:24:66.18:0,66,730	0/0:23,0:23:66.15:0,66,704	0/0:21,0:21:57.15:0,57,631	0/0:19,0:19:54.13:0,54,589	0/0:19,0:19:51.09:0,51,550	0/0:26,0:26:66.18:0,66,730	0/0:23,0:24:59.20:0,59,672	0/0:23,0:23:59.26:0,59,688	0/0:22,0:22:54.12:0,54,575	0/0:20,0:20:54.15:0,54,597	0/0:5,0:5:15.04:0,15,166	0/0:8,0:8:24.06:0,24,265	0/0:15,0:15:39.10:0,39,429	0/0:21,0:21:51.14:0,51,564	1/1:2,11:13:32.99:286,33,0	0/0:27,0:27:78.21:0,78,863	0/0:22,1:23:30.84:0,31,548	0/0:9,0:9:24.01:0,24,243
chr10	110221699	.	TA	T	1944.30	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.573;DP=615;FS=7.774;HRun=8;HaplotypeScore=77.7303;InbreedingCoeff=0.9980;MQ=80.48;MQ0=0;MQRankSum=-0.239;QD=24.00;ReadPosRankSum=1.724;VQSLOD=4.3679;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.15:0,54,641	0/0:10,0:10:24.07:0,24,290	0/0:20,0:20:41.91:0,42,440	0/0:17,0:17:32.58:0,33,357	1/1:1,26:27:78.09:744,78,0	1/1:1,22:23:63.10:608,63,0	1/1:2,11:13:30.04:290,30,0	0/0:38,0:38:99:0,99,1145	0/0:29,0:29:81.23:0,81,966	0/0:28,0:28:78.22:0,78,930	0/0:23,0:23:63.17:0,63,735	0/0:21,0:21:54.13:0,54,620	0/0:20,0:20:60.14:0,60,698	0/0:23,0:23:57.17:0,57,688	0/0:25,0:25:72.20:0,72,847	0/0:22,0:22:63.19:0,63,761	0/0:22,0:22:60.18:0,60,725	0/0:17,0:17:42.13:0,42,507	0/0:18,0:18:48.12:0,48,549	0/0:34,0:34:84.11:0,84,944	0/0:12,0:12:36.08:0,36,412	0/0:19,0:19:54.16:0,54,643	0/0:22,0:22:66.19:0,66,785	0/0:27,0:27:75.20:0,75,873	1/1:1,17:18:48.07:463,48,0	0/0:29,0:29:69.19:0,69,812	0/0:32,0:32:84.26:0,84,1015	0/0:7,0:7:21.06:0,21,254
chr10	110223118	.	CAG	C	1219.36	PASS	AB=0.997;AC=30;AF=0.536;AN=56;BaseQRankSum=4.750;DP=815;FS=19.643;HRun=0;HaplotypeScore=222.2655;InbreedingCoeff=0.3070;MQ=37.94;MQ0=43;MQRankSum=6.771;QD=2.18;ReadPosRankSum=3.904;VQSLOD=1.0456;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:54,0:52:16:93,16,0	0/0:11,0:11:13.50:0,13,235	0/1:13,0:2:0.84:1,0,19	0/0:33,0:5:11.44:0,11,67	0/1:9,0:9:0:0,0,0	0/0:16,0:15:0:0,0,0	0/1:30,0:22:3.87:21,0,4	0/0:50,0:43:87.43:0,87,663	0/1:41,0:41:29.54:63,0,30	0/0:37,0:36:81.17:0,81,861	0/1:15,0:12:1.52:2,0,145	1/1:45,1:43:13.89:188,14,0	1/1:19,0:19:8.83:127,9,0	1/1:26,1:25:5.43:69,5,0	1/1:22,0:22:11.10:137,11,0	0/0:24,0:24:45:0,45,651	0/1:37,0:34:17.88:140,0,18	0/1:27,0:25:49.18:49,0,96	0/0:25,0:22:40.80:0,41,392	0/1:25,0:22:12.48:12,0,18	0/1:49,0:42:0.66:24,0,1	1/1:20,0:18:8.69:58,9,0	1/1:11,0:9:0.41:30,0,0	1/1:50,0:50:46.25:239,46,0	1/1:19,0:17:5.57:49,6,0	0/0:60,0:55:2.86:0,3,489	0/1:30,1:31:11.22:11,0,132	1/1:11,1:11:16.50:76,16,0
chr10	110223124	.	C	CAG	835.13	PASS	AB=0.927;AC=14;AF=0.250;AN=56;BaseQRankSum=4.575;DP=748;FS=1.209;HRun=0;HaplotypeScore=218.4388;InbreedingCoeff=0.5968;MQ=37.10;MQ0=43;MQRankSum=6.677;QD=4.30;ReadPosRankSum=2.937;VQSLOD=2.3327;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:49:9.67:0,10,332	0/0:10,0:9:24.08:0,24,335	0/0:12,0:2:6.02:0,6,85	0/0:33,0:5:10.59:0,11,81	0/0:9,0:9:2.99:0,3,24	1/1:14,0:13:1.96:6,2,0	0/0:29,0:21:6.27:0,6,33	0/0:44,0:38:99:0,103,1208	0/0:35,0:35:26.77:0,27,341	0/0:33,0:31:81.20:0,81,1075	0/0:13,0:10:21.05:0,21,292	1/1:38,1:36:8.46:168,8,0	0/1:17,2:19:14.32:179,0,14	1/1:25,2:25:13.01:152,13,0	1/1:12,2:15:0.32:117,0,0	0/0:20,0:20:51.07:0,51,663	0/0:36,0:33:48.47:0,48,644	0/0:25,0:23:24:0,24,467	0/0:23,0:20:56.34:0,56,554	0/0:23,0:20:8.83:0,9,127	0/0:45,0:38:6.18:0,6,48	0/1:18,1:17:1.73:59,0,2	1/1:10,0:8:5.81:56,6,0	1/1:47,3:49:18.75:259,19,0	0/0:17,0:16:3:0,3,25	0/0:57,0:53:99:0,137,1370	0/0:27,0:27:41.67:0,42,466	0/0:12,0:11:27.08:0,27,373
chr10	110223126	.	GAC	G	1600.55	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=4.833;DP=739;FS=2.454;HRun=0;HaplotypeScore=203.8317;InbreedingCoeff=0.6748;MQ=36.86;MQ0=44;MQRankSum=4.878;QD=7.48;ReadPosRankSum=4.155;VQSLOD=3.3689;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:48:29.63:0,30,432	0/0:10,0:9:24.08:0,24,426	0/0:13,0:2:6.02:0,6,93	0/0:35,0:5:12.48:0,12,145	0/0:10,0:10:2.99:0,3,24	1/1:13,1:13:2.89:16,3,0	0/1:28,0:20:3.11:3,0,29	0/0:44,0:38:99:0,104,1559	0/0:35,0:35:22.66:0,23,359	0/0:33,0:31:90.11:0,90,1459	0/0:12,0:10:8.63:0,9,315	1/1:31,7:35:13.31:370,13,0	1/1:17,2:19:3.22:276,3,0	1/1:22,1:21:6.18:153,6,0	1/1:14,1:15:18.63:221,19,0	0/0:19,0:19:51.08:0,51,858	0/0:36,0:33:31.21:0,31,639	0/0:25,0:23:24.68:0,25,561	0/0:23,0:20:52.57:0,53,698	0/0:23,0:20:8.85:0,9,140	0/0:44,0:37:3.18:0,3,30	1/1:18,0:16:0.07:112,0,0	1/1:10,0:8:6.02:81,6,0	1/1:44,5:47:52.17:540,52,0	0/0:16,0:15:2.66:0,3,24	0/0:57,0:53:99:0,104,1234	0/0:28,0:28:24.68:0,25,428	0/0:12,0:11:26.96:0,27,333
chr10	110223130	.	GACAGACACAC	G	3527.45	PASS	AB=0.954;AC=23;AF=0.426;AN=54;BaseQRankSum=10.363;DP=743;FS=21.738;HRun=0;HaplotypeScore=251.4430;InbreedingCoeff=-0.1365;MQ=37.23;MQ0=43;MQRankSum=-2.063;QD=6.53;ReadPosRankSum=5.473;VQSLOD=1.0852;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:51,0:49:27.62:28,0,120	0/0:9,0:8:20.90:0,21,696	0/0:15,0:2:5.97:0,6,65	0/0:36,0:5:11.70:0,12,62	./.	1/1:9,5:13:3.01:87,3,0	1/1:19,7:19:11.79:232,12,0	0/0:41,0:36:42.74:0,43,483	0/1:37,0:37:49.05:81,0,49	0/0:35,0:33:83.80:0,84,2419	0/0:12,0:10:20.28:0,20,765	0/1:28,1:34:99:163,0,105	0/1:18,1:19:33.78:95,0,34	0/1:22,1:23:22.66:23,0,101	0/1:11,1:15:13.78:156,0,14	0/0:21,0:21:34.11:0,34,1718	0/1:33,0:30:99:246,0,112	0/1:24,0:22:99:107,0,146	0/1:24,0:21:99:207,0,244	0/1:22,0:19:17.86:18,0,19	1/1:47,0:39:2.18:18,2,0	1/1:13,0:15:5.72:77,6,0	1/1:7,0:7:3.01:37,3,0	0/1:52,1:53:47.52:311,0,48	0/0:6,7:13:3.20:0,3,25	0/1:57,0:54:99:1222,0,293	0/1:28,0:28:57.32:418,0,57	0/0:12,0:11:13.38:0,13,92
chr10	110223132	.	CAG	C	536.42	PASS	AB=0.992;AC=19;AF=0.352;AN=54;BaseQRankSum=4.394;DP=750;FS=1.022;HRun=0;HaplotypeScore=207.0912;InbreedingCoeff=0.1888;MQ=37.53;MQ0=44;MQRankSum=5.733;QD=1.51;ReadPosRankSum=3.130;VQSLOD=2.6961;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,1:48:19.84:0,20,155	0/0:9,0:8:20.87:0,21,286	0/1:15,0:2:0.87:1,0,14	0/0:39,0:6:11.53:0,12,56	./.	1/1:14,0:13:5.29:27,5,0	1/1:28,0:20:12.87:62,13,0	0/0:39,0:33:85.52:0,86,563	0/0:37,0:37:12.81:0,13,131	0/0:36,1:35:5.35:0,5,781	0/0:12,0:10:20.23:0,20,272	0/1:37,0:34:0.92:149,0,1	0/1:19,0:19:40.89:52,0,41	0/1:25,0:23:20.71:21,0,55	0/1:16,0:16:31.66:65,0,32	0/1:23,0:23:24.45:24,0,499	0/0:30,1:28:9.37:0,9,165	0/1:23,0:22:2.21:2,0,163	0/0:26,0:23:42.57:0,43,313	0/0:21,0:18:3.28:0,3,25	1/1:51,0:43:2.31:18,2,0	1/1:16,0:15:10.97:59,11,0	1/1:9,0:7:2.97:20,3,0	0/1:53,0:51:76.22:178,0,76	0/0:12,0:12:2.26:0,2,33	0/0:58,1:55:41.68:0,42,379	0/1:25,2:27:18.78:19,0,96	0/0:12,0:11:17.16:0,17,105
chr10	110223134	.	GAC	G	986.30	PASS	AB=0.980;AC=34;AF=0.680;AN=50;BaseQRankSum=7.437;DP=757;FS=11.753;HRun=0;HaplotypeScore=210.3585;InbreedingCoeff=0.1528;MQ=37.76;MQ0=47;MQRankSum=-4.547;QD=1.53;ReadPosRankSum=3.851;VQSLOD=1.5580;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:52,0:50:0.69:4,1,0	0/0:9,0:8:15.01:0,15,203	./.	0/0:42,0:6:3.22:0,3,13	./.	1/1:12,1:12:5.99:61,6,0	1/1:25,3:21:14.78:148,15,0	1/1:38,0:32:4.26:13,4,0	0/1:37,0:37:10.58:11,0,11	0/1:32,4:34:67.61:68,0,497	0/0:12,0:10:18.02:0,18,218	1/1:35,1:34:4.72:85,5,0	0/1:19,0:19:10.88:27,0,11	0/1:22,0:21:4.85:5,0,16	0/1:17,0:17:26.09:26,0,28	0/1:22,1:24:9.59:10,0,468	1/1:28,0:25:13.24:60,13,0	1/1:23,0:22:5.57:28,6,0	1/1:29,0:25:10.99:65,11,0	1/1:19,0:16:2.04:6,2,0	0/1:53,0:45:0:0,0,0	1/1:15,0:14:3.90:24,4,0	1/1:10,0:8:2.74:12,3,0	0/1:52,1:51:17.15:88,0,17	0/0:12,0:12:2.41:0,2,12	1/1:60,0:56:23.26:288,23,0	1/1:32,0:32:22.37:104,22,0	./.
chr10	110223149	.	ACACACACACACACAC	A	5489	PASS	AB=0.987;AC=18;AF=0.321;AN=56;BaseQRankSum=8.684;DP=753;FS=8.924;HRun=0;HaplotypeScore=282.7202;InbreedingCoeff=0.6350;MQ=43.16;MQ0=58;MQRankSum=-7.794;QD=15.51;ReadPosRankSum=1.401;VQSLOD=2.2452;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:38:14.41:217,14,0	0/0:9,0:8:18.06:0,18,930	0/0:30,0:12:36.09:0,36,791	0/0:52,0:15:43.33:0,43,1146	0/0:12,0:12:3.01:0,3,72	0/0:14,0:14:14.71:0,15,371	0/0:28,0:24:32.83:0,33,759	0/1:27,0:19:16.77:298,0,17	1/1:37,1:36:15.50:218,15,0	0/0:34,0:32:96.32:0,96,4208	0/0:13,0:12:24.08:0,24,1328	0/0:33,0:32:50.80:0,51,1366	0/0:16,0:16:27.05:0,27,676	0/0:16,0:16:21.07:0,21,669	0/0:16,0:16:27.09:0,27,713	0/0:24,0:24:63.22:0,63,3128	1/1:27,0:23:14.40:464,14,0	1/1:18,0:16:21.95:353,22,0	0/1:27,1:23:16.29:858,0,16	1/1:18,1:16:3.01:55,3,0	0/1:56,1:47:0.09:0,0,0	0/0:19,0:18:30.08:0,30,725	0/0:11,0:9:6.02:0,6,114	0/0:56,0:55:88.57:0,89,2433	0/0:15,0:15:15.69:0,16,446	0/1:61,0:56:99:2187,0,317	1/1:27,1:26:36.95:756,37,0	1/1:9,0:6:9:84,9,0
chr10	110223151	.	ACACACACACACAC	A	9295.51	PASS	AB=0.582;AC=20;AF=0.357;AN=56;BaseQRankSum=4.656;DP=722;FS=10.690;HRun=0;HaplotypeScore=247.1334;InbreedingCoeff=0.7876;MQ=43.91;MQ0=56;MQRankSum=-7.844;QD=28.69;ReadPosRankSum=0.794;VQSLOD=2.4122;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,15:31:18.01:309,18,0	0/0:8,0:7:18.06:0,18,865	0/0:31,0:13:39.10:0,39,732	0/0:52,0:17:48.11:0,48,1016	0/0:12,0:12:3.01:0,3,65	0/0:14,0:14:16.67:0,17,352	0/0:30,0:26:33.67:0,34,674	1/1:23,1:15:45.06:906,45,0	1/1:4,33:35:15.52:458,16,0	0/0:36,0:34:99:0,101,3701	0/0:13,0:12:24.08:0,24,1213	0/0:31,0:31:48.96:0,49,1013	0/0:14,0:14:24.08:0,24,483	0/0:15,0:15:21.07:0,21,548	0/0:17,0:17:32.59:0,33,569	0/0:23,0:23:63.22:0,63,2755	1/1:17,8:19:28.48:822,28,0	1/1:17,3:15:29.96:576,30,0	1/1:5,19:21:0.26:1140,0,0	1/1:6,13:17:6.46:121,6,0	0/1:16,37:43:0.09:0,0,0	0/0:19,0:18:30.04:0,30,565	0/0:11,0:9:6.02:0,6,81	0/0:56,0:55:88.59:0,89,1848	0/0:15,0:15:18.70:0,19,401	0/1:14,39:49:99:3702,0,180	1/1:11,17:26:36.88:1080,37,0	1/1:7,1:6:12.02:182,12,0
chr10	110223153	.	ACACACACACAC	A	6534.64	PASS	AB=0.995;AC=22;AF=0.393;AN=56;BaseQRankSum=8.324;DP=728;FS=8.695;HRun=0;HaplotypeScore=248.3664;InbreedingCoeff=0.6987;MQ=45.10;MQ0=54;MQRankSum=-8.484;QD=17.85;ReadPosRankSum=0.814;VQSLOD=2.2168;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,1:31:17.95:261,18,0	0/0:8,0:7:18.04:0,18,756	0/0:33,0:17:10.60:0,11,662	0/0:51,0:18:47.17:0,47,891	0/0:12,0:12:3.01:0,3,48	0/1:13,0:13:3.04:3,0,253	0/1:30,0:26:7.69:8,0,508	1/1:22,0:13:39.07:541,39,0	1/1:36,1:35:15.52:281,16,0	0/0:36,0:34:93.32:0,93,3136	0/0:13,0:12:24.08:0,24,1045	0/0:31,0:31:48.11:0,48,705	0/0:14,0:14:23.68:0,24,325	0/0:16,0:16:23.95:0,24,445	0/0:17,0:17:28.43:0,28,376	0/0:25,0:25:66.23:0,66,2408	1/1:25,1:18:25.80:565,26,0	1/1:21,0:15:20.80:361,21,0	1/1:24,0:21:11.05:863,11,0	1/1:19,0:17:6.46:84,6,0	0/1:53,0:43:0.07:0,0,0	0/0:20,0:19:5.64:0,6,355	0/0:13,0:11:8.86:0,9,96	0/0:57,0:56:90.03:0,90,1340	0/0:15,0:15:18.74:0,19,337	0/1:48,1:46:85.03:2616,0,85	1/1:26,3:27:39.39:842,39,0	1/1:9,0:7:11.93:108,12,0
chr10	110223163	.	AC	A	4041.69	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=10.472;DP=874;FS=51.056;HRun=1;HaplotypeScore=223.0763;InbreedingCoeff=0.8066;MQ=45.51;MQ0=46;MQRankSum=-9.726;QD=9.98;ReadPosRankSum=0.104;VQSLOD=-0.5639;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:44,8:48:26.87:251,27,0	0/0:7,0:6:12.04:0,12,191	0/1:39,0:24:8.67:9,0,667	0/0:40,0:22:46.37:0,46,716	0/0:14,0:14:3.01:0,3,41	0/0:18,0:16:17.31:0,17,184	0/0:34,0:33:25.43:0,25,448	1/1:27,14:28:83.65:749,84,0	1/1:51,2:50:16.47:142,16,0	0/0:32,0:29:49.64:0,50,867	0/0:11,0:11:18.06:0,18,280	0/0:32,0:31:40.81:0,41,365	0/0:19,0:17:23.62:0,24,215	0/0:21,0:21:12.24:0,12,285	0/0:33,0:30:8.53:0,9,357	0/0:33,0:31:68.53:0,69,928	1/1:29,9:28:24.68:223,25,0	1/1:22,4:19:35.78:386,36,0	1/1:29,3:24:59.86:638,60,0	1/1:16,0:15:6.46:63,6,0	0/0:54,3:47:0.16:0,0,0	0/0:23,0:22:10.21:0,10,314	0/0:11,0:10:8.99:0,9,102	0/0:68,0:66:78.95:0,79,1178	0/0:16,0:16:18.05:0,18,232	1/1:57,2:54:99:1143,101,0	1/1:41,2:40:53.59:418,54,0	1/1:4,2:4:2.96:19,3,0
chr10	110223164	.	CG	C	3748.20	PASS	AB=0.815;AC=26;AF=0.464;AN=56;BaseQRankSum=9.297;DP=885;FS=74.301;HRun=1;HaplotypeScore=229.2631;InbreedingCoeff=0.5021;MQ=45.93;MQ0=44;MQRankSum=-9.187;QD=6.85;ReadPosRankSum=-1.054;VQSLOD=-0.6408;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,24:49:7.97:252,8,0	0/1:6,0:5:4.92:5,0,176	0/1:33,5:25:91.16:91,0,786	0/0:38,1:23:21.06:0,21,852	0/0:15,1:16:3.01:0,3,48	0/0:13,5:16:18.04:0,18,249	0/0:26,9:34:15.23:0,15,647	1/1:17,23:28:83.44:971,83,0	0/1:38,15:51:7.15:118,0,7	0/0:28,5:30:33.68:0,34,1009	0/0:12,0:12:18.06:0,18,288	0/0:30,4:33:57.12:0,57,672	0/0:11,8:17:24.08:0,24,339	0/1:13,8:21:11.48:11,0,382	0/1:18,15:30:38.71:39,0,501	0/0:26,9:33:75.20:0,75,1067	1/1:20,15:29:24.27:227,24,0	1/1:9,11:19:28.46:268,28,0	1/1:24,9:25:52.69:402,53,0	1/1:14,2:15:7.71:68,8,0	1/1:44,10:49:2.71:23,3,0	0/1:17,5:22:8.41:8,0,418	0/0:10,2:11:9.03:0,9,137	0/0:56,12:66:36.25:0,36,1562	0/0:15,2:17:17.73:0,18,284	1/1:43,13:54:45.73:790,46,0	1/1:23,18:40:39.26:434,39,0	1/1:3,2:3:3.01:42,3,0
chr10	110223519	.	TACTACTA	T	1755.80	PASS	AB=0.845;AC=15;AF=0.278;AN=54;BaseQRankSum=4.719;DP=510;FS=17.667;HRun=0;HaplotypeScore=146.5293;InbreedingCoeff=0.4572;MQ=35.75;MQ0=21;MQRankSum=-3.556;QD=13.61;ReadPosRankSum=-1.075;VQSLOD=1.0693;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:21:7.18:58,0,7	0/0:5,0:3:5.05:0,5,44	0/0:27,0:9:24.55:0,25,469	0/0:38,0:10:22.85:0,23,479	0/0:17,0:16:15.52:0,16,478	0/0:19,0:16:7.95:0,8,103	0/0:23,0:23:30.12:0,30,1464	1/1:5,6:7:17.02:241,17,0	0/1:8,2:13:33.66:39,0,34	0/0:29,0:27:72.92:0,73,1915	0/0:18,0:12:14.92:0,15,303	0/0:16,0:16:17.31:0,17,405	0/0:19,0:19:26.92:0,27,629	0/0:17,0:17:14.54:0,15,422	0/0:21,0:21:29.48:0,29,847	0/0:37,0:37:90.29:0,90,2166	0/1:7,6:12:68.47:152,0,68	1/1:3,4:8:12.01:175,12,0	0/1:3,0:2:13.97:14,0,16	./.	1/1:17,0:13:3.41:75,3,0	0/0:17,0:14:9.02:0,9,203	0/0:19,0:17:11.62:0,12,172	0/0:27,0:26:31.88:0,32,1027	0/0:20,0:18:12.03:0,12,279	1/1:6,11:16:13.23:598,13,0	0/1:6,7:15:28.35:274,0,28	1/1:2,0:6:15.03:304,15,0
chr10	110223527	.	C	CT	664.18	PASS	AB=0.967;AC=17;AF=0.304;AN=56;BaseQRankSum=1.670;DP=698;FS=1.321;HRun=0;HaplotypeScore=207.5280;InbreedingCoeff=-0.1259;MQ=35.03;MQ0=28;MQRankSum=-1.976;QD=1.90;ReadPosRankSum=0.492;VQSLOD=2.8848;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:32:3.30:0,3,18	1/1:4,1:3:0.47:1,0,0	0/0:32,0:9:23.91:0,24,311	0/0:43,0:10:24.05:0,24,281	0/0:20,0:20:12.04:0,12,155	1/1:14,1:18:2.52:18,3,0	0/0:32,0:32:48.52:0,49,565	0/0:19,0:10:11.26:0,11,73	0/1:24,0:23:32.86:33,0,33	0/0:43,3:42:8.81:0,9,954	0/0:12,2:10:12:0,12,160	0/1:28,2:30:46.56:47,0,176	0/1:26,2:27:91.57:92,0,102	0/1:23,1:22:26.16:89,0,26	0/1:33,3:36:99:154,0,156	0/0:38,0:39:65.21:0,65,847	0/1:15,0:14:9.71:34,0,10	0/0:8,0:7:8.42:0,8,54	0/0:11,0:7:8.71:0,9,56	1/1:18,2:18:1.97:20,2,0	0/1:23,1:20:14.73:15,0,25	0/1:32,0:28:13.42:13,0,219	0/0:19,2:19:8.02:0,8,54	0/1:30,3:33:56.56:260,0,57	0/0:20,0:19:6:0,6,67	0/1:30,0:28:28.92:29,0,219	0/1:24,0:23:9.05:9,0,182	0/0:7,0:7:7.08:0,7,112
chr10	110223555	.	C	CAGAG	1988.93	PASS	AB=0.973;AC=20;AF=0.357;AN=56;BaseQRankSum=3.417;DP=691;FS=20.371;HRun=0;HaplotypeScore=206.1684;InbreedingCoeff=0.3402;MQ=47.30;MQ0=27;MQRankSum=-7.014;QD=6.81;ReadPosRankSum=3.760;VQSLOD=1.4197;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,2:24:0.13:44,0,0	0/0:8,0:8:9.03:0,9,131	0/0:34,0:16:22.94:0,23,444	0/0:54,0:17:9.52:0,10,249	0/0:22,0:20:14.51:0,15,240	0/0:13,0:13:1.81:0,2,5	0/0:30,0:30:39.11:0,39,572	0/1:27,0:17:34.23:88,0,34	1/1:19,3:21:5.51:101,6,0	0/0:51,0:46:99:0,124,2036	0/0:10,0:9:15.05:0,15,265	0/0:34,0:33:29.14:0,29,331	0/1:24,0:23:58.70:59,0,220	0/0:22,0:20:12.82:0,13,173	0/0:36,0:36:13.45:0,13,651	0/0:34,0:34:44.67:0,45,923	0/1:11,0:8:5.43:107,0,5	1/1:8,1:8:14.46:249,14,0	1/1:15,0:10:12.40:162,12,0	1/1:21,0:19:8.85:70,9,0	0/1:19,1:18:0.22:14,0,0	0/0:29,0:28:26.34:0,26,297	0/1:20,0:20:26.05:26,0,61	0/1:31,0:30:10.36:10,0,296	0/0:22,0:22:18.02:0,18,223	0/1:33,1:29:40.33:509,0,40	1/1:19,3:22:17.74:550,18,0	0/1:5,1:6:5.77:176,0,6
chr10	110223557	.	CAG	C	1335.29	PASS	AB=0.975;AC=25;AF=0.446;AN=56;BaseQRankSum=-0.954;DP=698;FS=11.700;HRun=0;HaplotypeScore=196.2356;InbreedingCoeff=0.0484;MQ=48.21;MQ0=27;MQRankSum=-2.372;QD=3.28;ReadPosRankSum=-1.691;VQSLOD=1.7723;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,2:22:2.55:0,3,24	0/0:8,0:8:8.94:0,9,68	0/0:35,0:17:39.04:0,39,400	0/0:55,0:19:16.20:0,16,184	0/0:21,1:20:14.97:0,15,122	1/1:14,0:14:2.15:7,2,0	0/0:27,1:28:36.12:0,36,361	0/1:29,0:20:75.50:144,0,75	0/0:22,0:21:4.01:0,4,33	0/0:51,0:46:99:0,114,1529	0/0:9,0:9:18.01:0,18,214	0/1:34,0:33:8.49:123,0,8	1/1:25,0:24:3.84:116,4,0	1/1:22,0:20:0.18:65,0,0	1/1:35,1:36:25.86:274,26,0	0/0:34,0:34:43.30:0,43,806	1/1:10,1:8:9.83:95,10,0	0/1:10,0:9:66.14:68,0,66	0/1:17,0:11:43.47:43,0,132	0/1:20,1:19:28.04:37,0,28	1/1:18,2:18:2.90:45,3,0	0/1:29,0:28:15.38:15,0,49	1/1:20,0:20:3.59:45,4,0	0/1:31,0:30:1.16:119,0,1	0/1:18,4:22:25.94:26,0,85	0/1:31,3:29:99:182,0,335	0/1:24,0:22:75.12:75,0,251	0/1:8,0:8:21.64:22,0,38
chr10	110223612	.	A	AG	314.10	PASS	AB=0.803;AC=7;AF=0.140;AN=50;BaseQRankSum=-1.518;DP=415;FS=24.223;HRun=0;HaplotypeScore=180.5374;InbreedingCoeff=0.0135;MQ=61.87;MQ0=0;MQRankSum=-3.245;QD=2.43;ReadPosRankSum=-0.378;VQSLOD=1.1642;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:1,7:7:0.47:0,0,1	0/0:12,0:12:17.44:0,17,101	0/0:19,1:17:17.19:0,17,126	0/1:29,0:27:14.21:14,0,148	0/0:17,0:16:15.91:0,16,76	0/0:15,0:14:3.93:0,4,25	0/1:15,0:13:42.26:42,0,69	0/1:17,5:18:34.66:35,0,42	0/0:2,2:4:1.41:0,1,3	0/0:38,0:36:69.70:0,70,495	0/0:16,0:15:11.77:0,12,57	0/0:16,0:16:15.24:0,15,78	0/0:15,0:15:18.36:0,18,106	0/0:18,0:17:8.90:0,9,45	0/0:22,0:22:18.82:0,19,193	0/1:28,0:28:25.22:25,0,93	./.	./.	0/0:4,0:4:5.31:0,5,23	0/0:3,19:22:5.89:0,6,18	./.	0/0:15,0:15:18.89:0,19,100	0/0:13,0:13:1.41:0,1,3	0/0:15,0:14:19.95:0,20,110	0/0:14,0:14:14.67:0,15,72	0/1:5,20:22:1.02:276,0,1	0/1:2,3:5:10.72:11,0,31	0/1:2,3:5:11.76:31,0,12
chr10	110223613	.	A	AC	230.10	PASS	AB=0.656;AC=4;AF=0.080;AN=50;BaseQRankSum=1.938;DP=412;FS=26.412;HRun=0;HaplotypeScore=173.8072;InbreedingCoeff=0.0866;MQ=59.21;MQ0=0;MQRankSum=-5.150;QD=4.04;ReadPosRankSum=3.189;VQSLOD=1.7643;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:1,7:7:0.47:0,0,1	0/0:12,0:12:18.05:0,18,215	0/0:18,0:16:47.78:0,48,530	0/0:26,0:24:65.72:0,66,706	0/0:18,0:17:16.93:0,17,190	0/0:15,0:14:3.95:0,4,39	0/0:14,0:12:21.46:0,21,215	0/1:16,5:17:14.28:14,0,127	0/0:2,2:4:1.41:0,1,3	0/0:38,0:36:99:0,101,1107	0/0:16,0:15:12.97:0,13,151	0/0:16,0:16:15.99:0,16,180	0/0:15,0:15:18.99:0,19,225	0/0:18,0:17:9.97:0,10,114	0/0:21,0:21:43.07:0,43,512	0/0:27,0:27:21.02:0,21,243	./.	./.	0/0:4,0:4:8.96:0,9,67	0/0:4,19:23:8.01:0,8,24	./.	0/0:15,0:15:19.90:0,20,191	0/0:14,0:14:1.41:0,1,3	0/0:15,0:14:21.06:0,21,251	0/0:14,0:14:15.52:0,16,187	0/1:6,20:23:28.39:276,0,28	0/1:2,3:5:10.62:11,0,49	0/1:2,3:5:12.72:31,0,13
chr10	110223621	.	CAGAG	C	92.29	PASS	AB=1.000;AC=7;AF=0.146;AN=48;BaseQRankSum=0.590;DP=368;FS=0.000;HRun=0;HaplotypeScore=172.9789;InbreedingCoeff=0.5506;MQ=54.26;MQ0=0;MQRankSum=-3.159;QD=2.10;ReadPosRankSum=-2.129;VQSLOD=2.1931;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:7:0:0,0,0	0/0:12,0:12:15.05:0,15,394	0/0:17,0:14:39.12:0,39,801	0/0:21,0:19:51.73:0,52,994	0/0:18,0:16:15.52:0,16,376	0/0:15,0:14:3.01:0,3,84	0/0:8,0:6:12.49:0,12,227	1/1:6,6:8:17.54:129,18,0	0/0:2,0:2:0:0,0,0	0/0:31,0:30:90.22:0,90,2321	0/0:16,0:15:12.51:0,13,268	0/0:16,0:16:11.60:0,12,275	0/0:15,0:15:17.98:0,18,355	0/0:18,0:16:12.45:0,12,251	0/0:18,0:18:39.50:0,39,827	0/0:25,0:25:21.39:0,21,349	./.	./.	./.	1/1:23,0:23:1.66:16,2,0	./.	0/0:13,0:13:9.45:0,9,120	0/0:15,0:15:0:0,0,0	0/0:14,0:13:18.51:0,19,439	0/0:14,0:14:15.05:0,15,398	0/0:25,0:22:27.37:0,27,695	1/1:4,0:4:2.97:28,3,0	0/1:5,0:5:36.83:37,0,41
chr10	110223855	.	TACG	T	416.88	PASS	AB=0.937;AC=23;AF=0.411;AN=56;BaseQRankSum=6.736;DP=358;FS=61.390;HRun=0;HaplotypeScore=107.2736;InbreedingCoeff=0.4231;MQ=51.47;MQ0=5;MQRankSum=-5.962;QD=3.56;ReadPosRankSum=4.450;VQSLOD=-0.5897;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,1:3:8.90:60,9,0	0/0:3,0:3:8.98:0,9,156	0/0:30,0:21:28.79:0,29,522	0/0:36,0:24:32.93:0,33,502	0/0:9,0:7:8.99:0,9,79	0/0:7,0:7:8.93:0,9,83	0/0:17,0:13:20.71:0,21,196	0/1:9,0:4:16.77:17,0,21	1/1:5,0:3:5.59:25,6,0	0/0:22,0:21:62.73:0,63,941	0/0:4,0:4:6.01:0,6,91	0/1:11,0:11:17.41:17,0,77	0/1:13,0:11:9.56:25,0,10	0/1:10,1:11:4.85:41,0,5	0/0:18,0:17:1.85:0,2,66	0/0:32,0:31:67.37:0,67,938	1/1:8,3:9:11.85:79,12,0	1/1:2,1:2:5.97:56,6,0	1/1:4,0:3:8.97:70,9,0	1/1:1,0:1:2.98:21,3,0	0/1:7,1:4:0:0,0,0	0/1:16,0:12:0.02:0,0,0	0/0:15,0:15:7.17:0,7,57	0/0:27,0:27:26.92:0,27,196	0/0:20,0:20:23.93:0,24,203	0/1:4,2:6:14.81:80,0,15	1/1:5,1:2:3.48:38,3,0	1/1:6,1:3:8.91:62,9,0
chr10	110223905	.	CCACCACCACACACACACACA	C	764.81	PASS	AB=1.000;AC=12;AF=0.231;AN=52;BaseQRankSum=1.229;DP=499;FS=8.149;HRun=0;HaplotypeScore=193.5867;InbreedingCoeff=0.1357;MQ=36.16;MQ0=34;MQRankSum=-5.074;QD=6.12;ReadPosRankSum=-1.072;VQSLOD=1.9890;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:14:12.93:0,13,634	0/0:10,0:10:27.07:0,27,1705	0/0:44,0:1:2.98:0,3,21	0/0:55,0:6:11.47:0,11,416	./.	1/1:1,4:5:3.09:125,3,0	1/1:9,12:18:8.54:389,9,0	0/1:18,0:17:99:116,0,1428	0/0:13,0:10:25.33:0,25,1628	0/0:31,0:30:90.31:0,90,5127	0/0:7,0:6:8.92:0,9,616	0/1:10,0:12:11.61:12,0,1059	0/0:13,0:13:5.14:0,5,243	0/1:14,0:14:84.96:85,0,726	0/0:13,0:13:6.02:0,6,364	0/0:34,0:33:93.32:0,93,5864	0/0:13,0:11:18.46:0,18,855	0/1:12,0:7:36.04:36,0,1049	0/1:5,0:5:74.77:87,0,75	0/0:14,0:13:2:0,2,168	0/0:18,0:14:5.52:0,6,352	0/0:21,0:23:6.40:0,6,374	0/1:17,0:17:1.81:2,0,204	0/0:20,0:21:23.73:0,24,1339	1/1:3,17:20:2.03:52,2,0	0/0:15,0:12:30.10:0,30,1453	0/0:10,0:9:12.50:0,13,1213	./.
chr10	110223908	.	C	CA	1407.89	PASS	AB=0.899;AC=32;AF=0.571;AN=56;BaseQRankSum=4.805;DP=519;FS=7.322;HRun=1;HaplotypeScore=124.9738;InbreedingCoeff=0.4377;MQ=36.35;MQ0=33;MQRankSum=-4.542;QD=4.94;ReadPosRankSum=0.252;VQSLOD=0.1562;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,3:14:5.74:0,6,21	0/0:12,0:12:30.05:0,30,378	0/0:45,0:2:2.98:0,3,21	0/0:51,0:6:8.40:0,8,95	0/1:13,0:13:0:0,0,0	0/0:5,0:5:1.82:0,2,5	0/0:15,0:15:5.80:0,6,32	0/1:15,2:16:0.60:95,0,1	1/1:10,5:10:14.75:131,15,0	0/0:33,0:32:93.26:0,93,1250	0/0:10,0:8:9.03:0,9,124	1/1:9,2:11:21.05:257,21,0	0/1:9,5:12:49.75:50,0,51	1/1:9,6:15:20.04:164,20,0	1/1:4,10:13:8.46:89,8,0	0/0:36,0:34:96.21:0,96,1286	0/1:9,4:11:37.55:38,0,51	1/1:10,2:7:20.66:155,21,0	0/1:7,0:5:5.71:6,0,25	1/1:10,4:13:2.44:10,2,0	1/1:18,3:16:1.81:30,2,0	1/1:14,10:24:5:63,5,0	1/1:14,6:19:2.20:34,2,0	1/1:14,9:22:21.72:204,22,0	0/1:17,0:17:0:0,0,0	1/1:11,4:12:11.79:135,12,0	1/1:7,5:11:0.20:111,0,0	1/1:6,0:6:1.38:7,1,0
chr10	110223910	.	AC	A	1860.01	PASS	AB=0.938;AC=39;AF=0.750;AN=52;BaseQRankSum=6.172;DP=539;FS=15.128;HRun=2;HaplotypeScore=122.9914;InbreedingCoeff=0.6731;MQ=36.41;MQ0=35;MQRankSum=-3.832;QD=5.67;ReadPosRankSum=-0.244;VQSLOD=-0.6432;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,5:15:8.51:82,9,0	0/0:13,0:13:33.07:0,33,401	./.	0/0:51,0:6:9.38:0,9,75	0/1:14,1:13:0:0,0,0	0/0:5,0:5:0.89:0,1,2	1/1:16,0:15:3.05:8,3,0	1/1:15,2:16:36.48:275,36,0	1/1:10,6:11:1.83:117,2,0	0/0:30,0:29:74.43:0,74,866	0/0:13,0:10:12:0,12,139	1/1:9,2:11:18.97:136,19,0	1/1:12,3:13:4.23:41,4,0	1/1:12,4:16:23.66:174,24,0	1/1:14,0:13:8.70:78,9,0	0/0:37,0:35:53.85:0,54,1122	1/1:11,4:13:11.75:60,12,0	1/1:9,4:8:23.63:183,24,0	1/1:8,0:5:6.45:48,6,0	1/1:10,6:15:2.68:11,3,0	1/1:20,1:16:5.59:34,6,0	1/1:18,7:25:5.11:52,5,0	1/1:7,14:20:4.97:62,5,0	1/1:20,4:23:27.56:214,28,0	./.	1/1:12,6:15:34.38:253,34,0	1/1:8,5:12:22.08:138,22,0	1/1:6,0:6:8.28:58,8,0
chr10	110223911	.	C	CA	3060.47	PASS	AB=1.000;AC=37;AF=0.712;AN=52;BaseQRankSum=4.089;DP=564;FS=14.875;HRun=1;HaplotypeScore=130.3941;InbreedingCoeff=0.7308;MQ=36.41;MQ0=34;MQRankSum=-4.530;QD=9.03;ReadPosRankSum=-0.867;VQSLOD=-0.1269;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,5:18:8.24:113,8,0	0/0:13,0:13:33.07:0,33,417	./.	0/0:49,0:5:8.31:0,8,85	0/1:15,0:13:0:0,0,0	0/0:5,0:5:0.89:0,1,2	0/0:16,0:15:5.09:0,5,20	1/1:7,12:18:44.14:461,44,0	1/1:13,3:11:16.85:196,17,0	0/0:31,0:31:77.20:0,77,916	0/0:13,0:10:12:0,12,143	1/1:11,2:13:22.31:276,22,0	1/1:11,6:15:4.06:62,4,0	1/1:13,4:17:23.93:265,24,0	1/1:7,10:16:11.91:143,12,0	0/0:34,1:35:85.98:0,86,1152	1/1:12,3:13:14.63:126,15,0	1/1:11,2:8:23.99:243,24,0	1/1:7,1:5:6.45:48,6,0	1/1:18,3:19:2.85:48,3,0	1/1:7,15:17:6.01:81,6,0	1/1:17,9:26:5.04:87,5,0	1/1:19,4:22:5.35:71,5,0	1/1:19,8:26:29:307,29,0	./.	1/1:13,7:17:36.51:342,37,0	1/1:10,2:12:23.84:229,24,0	1/1:4,2:6:9.03:132,9,0
chr10	110224255	.	AGTCT	A	5845.90	PASS	AB=0.975;AC=23;AF=0.411;AN=56;BaseQRankSum=8.769;DP=686;FS=11.971;HRun=0;HaplotypeScore=167.0606;InbreedingCoeff=0.9381;MQ=89.90;MQ0=2;MQRankSum=-5.737;QD=20.09;ReadPosRankSum=-0.901;VQSLOD=3.8007;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:30.06:546,30,0	0/0:5,0:5:15.01:0,15,329	0/0:41,0:37:48.07:0,48,975	0/1:77,0:64:1.77:2,0,397	0/0:19,0:19:30.07:0,30,682	0/0:16,0:16:48.15:0,48,1212	0/0:40,0:40:99:0,108,2487	1/1:2,20:22:54.05:786,54,0	1/1:2,24:26:60.21:1098,60,0	0/0:20,0:20:57.16:0,57,1212	0/0:10,0:9:18.03:0,18,366	0/0:26,0:26:78.22:0,78,1808	0/0:23,0:23:57.15:0,57,1284	0/0:31,0:31:81.25:0,81,1907	0/0:31,0:31:84.21:0,84,1754	0/0:38,0:38:56.45:0,56,2592	1/1:3,18:21:33.11:605,33,0	1/1:2,13:15:18.06:330,18,0	1/1:0,16:16:45.02:615,45,0	1/1:2,8:8:12.04:220,12,0	1/1:6,30:36:16.86:294,17,0	0/0:10,0:10:14.90:0,15,263	0/0:25,0:24:54.99:0,55,1326	0/0:41,0:41:99:0,120,2881	0/0:19,0:19:45.15:0,45,1022	1/1:2,15:17:39.06:564,39,0	1/1:1,17:18:33.09:568,33,0	1/1:0,5:5:12.04:218,12,0
chr10	110224258	.	CT	C	168.49	PASS	AB=0.987;AC=17;AF=0.304;AN=56;BaseQRankSum=13.128;DP=660;FS=2.425;HRun=1;HaplotypeScore=144.6350;InbreedingCoeff=0.5403;MQ=89.25;MQ0=2;MQRankSum=-9.551;QD=0.66;ReadPosRankSum=4.164;VQSLOD=-0.6116;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:16.92:46,17,0	0/0:5,0:5:15.01:0,15,212	0/0:39,0:35:86.88:0,87,1130	0/1:68,3:60:23.96:24,0,615	0/0:17,0:17:30.10:0,30,480	0/0:16,0:16:48.16:0,48,767	0/0:38,0:38:99:0,114,1776	0/1:21,0:21:11.80:12,0,85	1/1:24,1:25:36.36:102,36,0	0/0:21,0:21:60.20:0,60,957	0/0:10,0:10:18.06:0,18,288	0/0:26,0:26:78.27:0,78,1247	0/0:21,0:21:63.20:0,63,979	0/0:29,0:29:87.30:0,87,1387	0/0:30,0:30:84.29:0,84,1334	0/0:38,0:38:99:0,108,1768	1/1:18,0:18:19.99:56,20,0	1/1:13,0:13:10.90:30,11,0	0/0:16,0:16:2.42:0,2,102	1/1:8,0:8:7.27:20,7,0	0/1:34,0:34:7.48:7,0,67	0/0:12,0:12:18.05:0,18,265	0/0:24,0:23:57.03:0,57,910	0/0:41,0:41:99:0,120,1918	0/0:21,0:21:45.15:0,45,718	0/1:15,0:15:10.04:10,0,83	0/1:17,0:17:7.57:26,0,8	1/1:5,0:5:6.70:19,7,0
chr10	110224655	.	CT	C	13863.77	PASS	AB=0.800;AC=54;AF=0.964;AN=56;BaseQRankSum=3.397;DP=573;FS=6.637;HRun=2;HaplotypeScore=464.8873;InbreedingCoeff=-0.0340;MQ=58.25;MQ0=4;MQRankSum=-4.517;QD=24.20;ReadPosRankSum=2.478;VQSLOD=1.3995;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:60.05:560,60,0	1/1:1,8:9:27.01:261,27,0	0/1:4,5:10:40.97:174,0,41	0/1:13,1:14:20.83:21,0,137	1/1:3,30:33:83.87:715,84,0	1/1:3,20:23:66.03:618,66,0	1/1:0,20:19:56.98:501,57,0	1/1:4,10:14:36.04:379,36,0	1/1:3,23:25:71.56:610,72,0	1/1:6,22:28:75.13:797,75,0	1/1:3,24:27:65.99:630,66,0	1/1:2,27:29:86.91:761,87,0	1/1:0,14:14:41.98:366,42,0	1/1:2,18:20:56.98:511,57,0	1/1:3,31:33:98.84:836,99,0	1/1:0,27:27:80.99:713,81,0	1/1:4,8:12:24.01:225,24,0	1/1:0,7:7:18.04:198,18,0	1/1:3,8:11:21.04:242,21,0	1/1:2,24:26:68.71:593,69,0	1/1:2,11:12:33.05:320,33,0	1/1:2,25:27:77.92:678,78,0	1/1:2,22:23:65.87:590,66,0	1/1:1,14:15:32.96:290,33,0	1/1:2,26:27:80.55:699,81,0	1/1:0,28:27:78.02:766,78,0	1/1:2,25:27:80.98:752,81,0	1/1:0,2:2:6.01:61,6,0
chr10	110224656	.	T	TG	11137.56	PASS	AB=0.967;AC=54;AF=0.964;AN=56;BaseQRankSum=3.691;DP=588;FS=5.923;HRun=0;HaplotypeScore=505.1293;InbreedingCoeff=-0.0414;MQ=57.47;MQ0=4;MQRankSum=-4.920;QD=18.94;ReadPosRankSum=2.430;VQSLOD=1.3124;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:60.32:400,60,0	1/1:11,0:11:26.51:201,27,0	0/1:10,0:10:59.03:126,0,59	0/1:13,1:14:51.56:52,0,187	1/1:37,0:37:84.37:693,84,0	1/1:25,0:25:65.15:563,65,0	1/1:20,0:19:55.67:376,56,0	1/1:15,0:15:35.80:298,36,0	1/1:27,0:27:67.51:372,68,0	1/1:28,0:28:77.52:618,78,0	1/1:27,0:27:65.52:641,66,0	1/1:29,0:29:85.13:581,85,0	1/1:14,0:14:40.79:256,41,0	1/1:20,0:20:55.28:352,55,0	1/1:34,0:33:96.40:599,96,0	1/1:27,0:27:79.34:547,79,0	1/1:8,4:12:23.40:161,23,0	1/1:7,0:7:17.87:144,18,0	1/1:14,0:14:28.93:241,29,0	1/1:24,1:25:67.36:503,67,0	1/1:12,0:11:33.10:472,33,0	1/1:28,0:28:75.91:562,76,0	1/1:24,0:23:63.83:432,64,0	1/1:15,0:15:31.91:233,32,0	1/1:28,0:27:73.28:504,73,0	1/1:29,0:28:79.97:597,80,0	1/1:26,1:27:78.13:572,78,0	1/1:2,0:2:5.94:42,6,0
chr10	110224664	.	G	GT	15654.24	PASS	AB=0.909;AC=53;AF=0.981;AN=54;BaseQRankSum=2.258;DP=565;FS=10.321;HRun=0;HaplotypeScore=540.1393;InbreedingCoeff=-0.0230;MQ=49.14;MQ0=4;MQRankSum=-3.186;QD=28.16;ReadPosRankSum=2.537;VQSLOD=-0.0116;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:62.97:678,63,0	1/1:3,10:13:27.07:304,27,0	1/1:2,4:6:12.04:192,12,0	0/1:9,1:10:29.20:29,0,95	1/1:1,33:34:72.13:748,72,0	1/1:2,19:21:51.15:601,51,0	1/1:3,20:22:54.15:596,54,0	1/1:5,10:15:34.85:427,35,0	1/1:2,27:28:84.07:900,84,0	1/1:3,26:29:87.16:1091,87,0	1/1:3,24:27:40.34:439,40,0	1/1:2,29:31:90.19:1000,90,0	1/1:3,14:17:42.10:447,42,0	1/1:1,18:19:54.08:563,54,0	1/1:3,32:34:93.16:990,93,0	1/1:0,25:25:75.21:841,75,0	1/1:0,7:7:18.05:199,18,0	1/1:0,5:5:15.05:203,15,0	1/1:2,11:13:26.55:327,27,0	1/1:3,22:25:57.05:584,57,0	./.	1/1:1,27:28:69.17:734,69,0	1/1:2,21:23:60.13:654,60,0	1/1:0,13:13:30.07:317,30,0	1/1:2,24:25:75.09:807,75,0	1/1:2,24:25:74.91:901,75,0	1/1:2,27:29:84.24:1005,84,0	1/1:0,2:2:6.02:78,6,0
chr10	110224670	.	TA	T	16928.46	PASS	AB=0.833;AC=53;AF=0.946;AN=56;BaseQRankSum=2.480;DP=542;FS=4.909;HRun=2;HaplotypeScore=534.8587;InbreedingCoeff=0.3634;MQ=49.27;MQ0=0;MQRankSum=-2.795;QD=31.70;ReadPosRankSum=2.680;VQSLOD=0.4288;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:66.07:818,66,0	1/1:0,13:13:33.05:398,33,0	1/1:4,3:6:11.76:114,12,0	0/1:8,2:10:46.16:69,0,46	1/1:0,31:31:69.22:890,69,0	1/1:3,17:20:48.10:596,48,0	1/1:1,22:23:60.19:771,60,0	1/1:3,10:13:29.97:332,30,0	1/1:1,27:28:84.27:1075,84,0	1/1:2,23:25:69.22:889,69,0	1/1:4,21:25:39.13:502,39,0	1/1:0,29:29:84.27:1085,84,0	1/1:1,16:17:48.11:600,48,0	1/1:0,19:19:54.17:684,54,0	1/1:1,32:33:90.18:1122,90,0	1/1:0,25:25:75.24:968,75,0	1/1:1,4:5:12.04:155,12,0	1/1:0,6:6:15.05:194,15,0	1/1:1,13:14:26.45:306,26,0	1/1:2,21:23:54.18:696,54,0	0/0:4,4:8:2.22:0,2,7	1/1:1,27:28:66.21:851,66,0	1/1:1,19:20:48.16:618,48,0	1/1:1,12:13:27.09:348,27,0	1/1:1,24:25:69.04:829,69,0	1/1:1,24:25:72.17:906,72,0	1/1:1,28:29:81.26:1035,81,0	1/1:0,2:2:6.02:78,6,0
chr10	110224683	.	CT	C	15069.50	PASS	AB=1.000;AC=54;AF=0.964;AN=56;BaseQRankSum=4.473;DP=503;FS=3.330;HRun=4;HaplotypeScore=543.7958;InbreedingCoeff=0.2880;MQ=49.74;MQ0=0;MQRankSum=-3.991;QD=29.96;ReadPosRankSum=3.739;VQSLOD=-0.2389;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:58.95:769,59,0	1/1:1,14:15:36.11:424,36,0	0/1:9,0:8:1.23:1,0,135	0/1:6,0:5:11.06:11,0,18	1/1:2,26:28:66.20:785,66,0	1/1:1,14:15:42.13:501,42,0	1/1:2,23:25:63.19:745,63,0	1/1:3,9:12:26.83:261,27,0	1/1:1,26:27:78.24:926,78,0	1/1:0,23:23:69.21:825,69,0	1/1:1,17:18:39.12:464,39,0	1/1:1,28:29:84.26:999,84,0	1/1:1,13:14:39.12:465,39,0	1/1:1,19:20:57.17:676,57,0	1/1:1,27:28:81.25:965,81,0	1/1:2,23:25:69.21:823,69,0	1/1:0,4:4:12.04:143,12,0	1/1:0,7:7:15.05:179,15,0	1/1:3,11:14:21.88:210,22,0	1/1:1,21:22:59.87:686,60,0	1/1:1,2:3:2.90:16,3,0	1/1:2,23:25:66.20:783,66,0	1/1:0,18:18:51.16:605,51,0	1/1:1,11:12:27.08:319,27,0	1/1:0,21:21:54.17:644,54,0	1/1:1,23:24:69.21:822,69,0	1/1:1,28:29:81.24:952,81,0	1/1:0,2:2:6.02:71,6,0
chr10	110224695	.	AT	A	5050.17	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=2.073;DP=552;FS=1.628;HRun=5;HaplotypeScore=641.8976;InbreedingCoeff=0.8981;MQ=50.59;MQ0=0;MQRankSum=0.273;QD=28.69;ReadPosRankSum=1.698;VQSLOD=-0.3954;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:59.92:718,60,0	0/0:16,0:16:45.08:0,45,560	0/0:12,0:10:4.61:0,5,144	0/0:6,0:5:5.98:0,6,49	0/0:30,0:30:60.03:0,60,681	0/0:21,0:21:60.16:0,60,767	0/0:23,0:23:69.02:0,69,825	1/1:2,13:15:38.99:434,39,0	1/1:6,21:27:63.20:795,63,0	0/0:34,0:34:95.78:0,96,1225	0/0:18,0:18:48.10:0,48,577	0/0:33,0:33:93.20:0,93,1196	0/0:18,0:18:51.05:0,51,628	0/0:24,0:24:58.97:0,59,726	0/0:32,0:32:81.04:0,81,991	0/0:27,0:27:81.13:0,81,1044	1/1:0,3:3:3.01:31,3,0	1/1:1,7:8:18.06:224,18,0	1/1:4,12:16:29.58:353,30,0	1/1:3,22:25:66.15:771,66,0	1/1:1,2:3:5.96:52,6,0	0/0:25,0:25:65.31:0,65,722	0/0:22,0:22:63.01:0,63,740	0/0:14,0:14:29.99:0,30,349	0/0:21,0:21:60.07:0,60,709	1/1:5,20:25:22.20:720,22,0	1/1:2,25:27:72.23:912,72,0	1/1:2,1:3:3.01:39,3,0
chr10	110224707	.	A	AC	6611.89	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=3.595;DP=460;FS=1.464;HRun=0;HaplotypeScore=539.9820;InbreedingCoeff=0.5814;MQ=51.24;MQ0=0;MQRankSum=-2.137;QD=14.89;ReadPosRankSum=2.436;VQSLOD=1.7404;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:35.69:227,36,0	1/1:0,16:16:43.76:317,44,0	0/0:10,0:8:7.16:0,7,126	0/0:6,0:5:0.50:0,1,30	1/1:1,23:24:21.74:104,22,0	1/1:0,19:19:49.66:359,50,0	1/1:0,14:14:35.16:268,35,0	1/1:0,17:17:47.53:344,48,0	1/1:0,20:20:51.96:303,52,0	1/1:0,31:31:88.60:637,89,0	1/1:0,16:16:7.84:53,8,0	1/1:1,29:30:76.26:527,76,0	1/1:1,16:17:35.91:230,36,0	1/1:0,18:18:46.05:271,46,0	1/1:0,20:20:51.85:282,52,0	1/1:0,23:23:64.27:484,64,0	1/1:0,3:3:3.01:36,3,0	1/1:0,7:7:17.84:130,18,0	1/1:1,13:14:34.48:239,34,0	1/1:1,19:20:31.51:216,32,0	1/1:0,4:4:4.63:21,5,0	1/1:0,21:21:34.72:256,35,0	1/1:3,13:16:24.01:113,24,0	1/1:0,12:12:25.28:122,25,0	1/1:0,17:17:38.08:315,38,0	1/1:0,22:22:65.10:450,65,0	1/1:0,21:21:46.52:286,47,0	1/1:0,1:1:2.98:21,3,0
chr10	110224715	.	GC	G	5372.06	PASS	AB=0.750;AC=52;AF=0.929;AN=56;BaseQRankSum=2.084;DP=536;FS=0.000;HRun=2;HaplotypeScore=596.3365;InbreedingCoeff=0.2728;MQ=40.73;MQ0=0;MQRankSum=-2.909;QD=10.10;ReadPosRankSum=1.413;VQSLOD=1.4936;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,19:24:21.74:183,22,0	1/1:2,16:18:37.53:172,38,0	0/1:5,0:4:9.15:33,0,9	0/0:4,0:3:2.34:0,2,22	1/1:4,22:26:18.60:89,19,0	1/1:5,17:22:45.59:214,46,0	1/1:7,11:18:35.27:171,35,0	1/1:9,17:26:73.78:481,74,0	1/1:4,19:23:58.56:378,59,0	1/1:6,30:36:82.54:534,83,0	1/1:5,16:21:5.37:33,5,0	1/1:6,28:34:64.11:295,64,0	1/1:9,16:25:47.92:280,48,0	1/1:5,18:23:49.45:226,49,0	1/1:3,19:22:45.39:180,45,0	1/1:0,23:23:43.92:179,44,0	1/1:0,3:3:2.96:19,3,0	1/1:3,7:10:23.78:171,24,0	1/1:3,14:17:36.89:284,37,0	1/1:6,18:24:29.69:166,30,0	0/1:0,4:4:0.57:15,0,1	1/1:7,19:26:24.19:127,24,0	1/1:1,16:17:18.45:89,18,0	1/1:1,12:13:21.76:82,22,0	1/1:7,15:22:29.77:143,30,0	1/1:2,21:23:64.30:419,64,0	1/1:4,21:25:59.52:384,60,0	1/1:0,1:1:2.98:22,3,0
chr10	110224768	.	T	TGTTCCCAC	10580.13	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-6.178;DP=485;FS=20.972;HRun=0;HaplotypeScore=325.9863;InbreedingCoeff=0.9622;MQ=68.85;MQ0=0;MQRankSum=-7.264;QD=67.82;ReadPosRankSum=-2.300;VQSLOD=3.2813;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,8:19:48.15:905,48,0	0/0:11,0:11:28.88:0,29,577	0/0:17,0:17:28.98:0,29,648	0/0:9,0:9:20.71:0,21,387	0/0:23,0:23:38.52:0,39,390	0/0:18,0:18:48.31:0,48,746	0/0:17,0:17:41.91:0,42,663	1/1:18,5:23:53.74:1225,54,0	1/1:4,17:21:60.20:2069,60,0	0/0:24,0:24:42.69:0,43,1300	0/0:13,0:13:11.96:0,12,212	0/0:34,0:34:51.09:0,51,1662	0/0:26,0:26:75.06:0,75,1486	0/0:24,0:24:36.53:0,37,1103	0/0:23,0:23:51.91:0,52,951	0/0:20,0:20:39.03:0,39,994	1/1:10,2:12:30.05:479,30,0	1/1:3,5:8:21.05:663,21,0	1/1:10,2:12:27.04:542,27,0	1/1:1,6:8:24.08:669,24,0	1/1:6,10:16:32.68:626,33,0	0/0:21,0:21:43.73:0,44,739	0/0:17,0:17:8.09:0,8,449	0/0:12,0:12:10.33:0,10,313	0/0:20,0:20:53.64:0,54,949	1/1:5,12:17:45.08:1521,45,0	1/1:3,14:18:54.18:1717,54,0	1/1:1,1:2:6.02:164,6,0
chr10	110225120	.	CAGAG	C	2675.18	PASS	AB=0.600;AC=18;AF=0.321;AN=56;BaseQRankSum=11.088;DP=617;FS=14.784;HRun=0;HaplotypeScore=139.3285;InbreedingCoeff=0.5848;MQ=49.21;MQ0=16;MQRankSum=-7.368;QD=17.15;ReadPosRankSum=-0.597;VQSLOD=2.6442;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,7:16:11.05:140,11,0	0/0:10,0:10:21.07:0,21,468	0/0:40,0:12:21.59:0,22,374	0/0:70,0:19:39.12:0,39,839	0/0:28,0:28:60.19:0,60,1394	0/0:22,0:22:8.92:0,9,700	0/0:26,0:26:45.07:0,45,1040	1/1:7,5:12:21:316,21,0	1/1:4,4:7:12.01:156,12,0	0/0:27,0:25:72.16:0,72,1684	0/0:10,0:10:27.09:0,27,706	0/0:28,0:28:57.13:0,57,1376	0/0:23,0:23:50.89:0,51,1204	0/0:20,0:20:38.60:0,39,904	0/0:22,0:22:30.10:0,30,792	0/0:20,0:19:54.16:0,54,1309	0/1:4,10:13:20.84:253,0,21	0/1:2,11:12:22.58:324,0,23	1/1:8,3:10:14.71:203,15,0	0/1:5,15:20:44.18:171,0,44	1/1:7,4:10:2.99:25,3,0	0/0:38,0:37:90.31:0,90,2296	0/0:10,0:10:24.07:0,24,557	0/0:49,0:48:99:0,111,2650	0/0:18,0:18:30.10:0,30,739	0/1:11,8:18:43.17:473,0,43	1/1:2,22:24:45.10:786,45,0	1/1:0,5:5:2.96:19,3,0
chr10	110225156	.	C	CAGAG	1169.07	PASS	AB=0.898;AC=12;AF=0.231;AN=52;BaseQRankSum=8.141;DP=624;FS=6.145;HRun=0;HaplotypeScore=144.4584;InbreedingCoeff=0.4097;MQ=42.84;MQ0=42;MQRankSum=-8.122;QD=9.28;ReadPosRankSum=-1.971;VQSLOD=2.3026;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,1:14:3.01:75,3,0	0/0:14,0:14:30.09:0,30,521	0/0:24,0:3:7.84:0,8,93	0/0:39,0:4:3.01:0,3,40	0/0:28,0:28:45.14:0,45,783	0/0:27,0:26:27.03:0,27,470	0/0:24,0:22:24:0,24,427	0/1:17,0:8:22.08:125,0,22	0/0:12,0:9:6.02:0,6,76	0/0:34,0:31:78.18:0,78,1262	0/0:17,0:16:30.02:0,30,514	0/0:38,0:34:41.76:0,42,763	0/0:26,0:23:36.12:0,36,645	0/0:24,0:21:24.94:0,25,413	0/0:28,0:26:21.06:0,21,356	0/0:20,0:18:51.14:0,51,860	0/1:12,2:14:23.14:106,0,23	1/1:11,1:8:5.91:38,6,0	0/1:9,1:7:93.74:94,0,103	1/1:11,3:15:6:85,6,0	./.	0/0:41,0:39:63.19:0,63,1098	0/0:19,0:18:30.09:0,30,521	0/0:51,0:45:84.26:0,84,1420	0/0:22,0:22:18.05:0,18,301	0/1:9,3:14:78.76:352,0,79	1/1:12,7:19:23.74:447,24,0	./.
chr10	110225160	.	GAC	G	263.87	PASS	AB=0.989;AC=11;AF=0.212;AN=52;BaseQRankSum=7.614;DP=610;FS=0.840;HRun=0;HaplotypeScore=121.9677;InbreedingCoeff=0.2955;MQ=41.41;MQ0=42;MQRankSum=-7.035;QD=2.22;ReadPosRankSum=-2.095;VQSLOD=2.2639;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,2:13:3.01:39,3,0	0/0:14,0:14:30.09:0,30,542	0/0:22,0:2:5.98:0,6,46	0/0:35,0:3:2.70:0,3,20	0/0:29,0:29:45.07:0,45,795	0/0:26,0:25:27.08:0,27,456	0/0:24,0:22:23.81:0,24,415	0/1:17,1:8:11.52:48,0,12	0/0:11,1:9:5.98:0,6,53	0/0:36,0:33:93.16:0,93,1495	0/0:20,0:19:36.55:0,37,611	0/0:40,0:36:45.19:0,45,783	0/0:25,0:22:39.12:0,39,693	0/0:24,0:21:27.73:0,28,453	0/0:22,0:21:21.06:0,21,372	0/0:19,0:17:51.14:0,51,904	0/1:16,0:15:11.72:12,0,112	1/1:10,0:6:5.91:38,6,0	0/1:11,0:7:25.42:25,0,122	0/1:16,0:14:22.09:29,0,22	./.	0/0:41,0:38:63.15:0,63,1070	0/0:20,0:19:30.09:0,30,546	0/0:51,0:45:84.19:0,84,1446	0/0:24,0:24:18.05:0,18,314	0/1:15,0:13:71:100,0,71	1/1:13,3:15:15.96:118,16,0	./.
chr10	110225164	.	G	GACAC	846.13	PASS	AB=0.926;AC=10;AF=0.192;AN=52;BaseQRankSum=7.723;DP=619;FS=0.778;HRun=0;HaplotypeScore=135.6619;InbreedingCoeff=0.1675;MQ=40.73;MQ0=43;MQRankSum=-7.531;QD=6.99;ReadPosRankSum=-2.947;VQSLOD=1.8622;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,1:12:3.01:39,3,0	0/0:17,0:17:33.09:0,33,588	0/0:18,0:2:5.96:0,6,43	0/0:27,0:3:3.01:0,3,39	0/0:33,0:33:42.14:0,42,824	0/0:25,0:24:27.02:0,27,479	0/0:25,0:22:15.19:0,15,447	0/1:16,0:6:28.10:32,0,28	0/0:8,3:9:6.02:0,6,79	0/0:38,0:33:84.22:0,84,1468	0/0:22,0:20:36.58:0,37,662	0/0:42,0:38:45.54:0,46,820	0/0:26,0:23:38.25:0,38,752	0/0:25,0:21:24.14:0,24,427	0/0:23,0:22:18.06:0,18,359	0/0:19,0:17:48.15:0,48,912	0/1:17,1:15:88.15:97,0,88	0/1:8,2:6:27.97:69,0,28	0/1:13,0:8:43.44:43,0,65	0/1:15,1:14:8.38:27,0,8	./.	0/0:39,0:36:60.16:0,60,1080	0/0:19,0:18:27.09:0,27,539	0/0:54,0:48:78.25:0,78,1465	0/0:26,0:26:15.05:0,15,299	0/1:12,3:13:38.60:378,0,39	1/1:15,1:15:21.01:305,21,0	./.
chr10	110225170	.	GAC	G	222.01	PASS	AB=1.000;AC=11;AF=0.229;AN=48;BaseQRankSum=7.635;DP=575;FS=0.000;HRun=0;HaplotypeScore=115.9188;InbreedingCoeff=0.2988;MQ=40.69;MQ0=41;MQRankSum=-6.767;QD=1.93;ReadPosRankSum=-3.196;VQSLOD=0.7586;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:11:3.01:39,3,0	0/0:18,0:18:35.90:0,36,626	./.	./.	0/0:35,0:35:39.10:0,39,672	0/0:23,0:22:21.07:0,21,370	0/0:23,0:19:19.02:0,19,284	0/1:14,0:3:11.88:32,0,12	0/0:10,0:9:5.98:0,6,47	0/0:35,0:29:80.19:0,80,1273	0/0:21,0:19:30.98:0,31,618	0/0:38,3:36:19.41:0,19,698	0/0:26,0:23:20.01:0,20,635	0/0:21,2:19:9.43:0,9,390	0/0:26,0:23:18.06:0,18,346	0/0:17,0:16:48.09:0,48,789	0/1:20,0:16:12.71:13,0,141	1/1:10,0:6:3.90:21,4,0	0/1:12,0:7:11.76:12,0,57	0/1:12,0:10:29.19:29,0,45	./.	0/0:36,0:33:48.15:0,48,877	0/0:19,0:18:27.09:0,27,508	0/0:51,0:45:57.19:0,57,1062	0/0:27,0:27:15.03:0,15,255	0/1:15,0:12:15.62:90,0,16	1/1:16,0:15:16.46:128,16,0	./.
chr10	110225198	.	CAG	C	823.23	PASS	AB=0.791;AC=13;AF=0.283;AN=46;BaseQRankSum=0.664;DP=624;FS=2.601;HRun=0;HaplotypeScore=101.6720;InbreedingCoeff=0.2261;MQ=33.32;MQ0=57;MQRankSum=2.331;QD=3.08;ReadPosRankSum=-0.898;VQSLOD=2.3799;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:17,0:17:29.88:0,30,480	./.	./.	1/1:31,8:37:6.02:79,6,0	1/1:25,6:30:5.95:79,6,0	0/0:23,13:31:4.22:0,4,55	0/0:26,0:7:12.55:0,13,88	0/0:14,0:9:6.02:0,6,103	0/0:37,0:28:78.25:0,78,1307	0/0:24,0:21:33.10:0,33,543	0/1:29,12:36:99:169,0,192	0/1:14,11:22:94.71:171,0,95	0/1:23,6:25:21.65:77,0,22	./.	0/0:19,0:18:48.11:0,48,741	0/1:18,1:13:76.69:82,0,77	0/0:11,0:6:4.14:0,4,135	0/0:12,0:8:11.63:0,12,87	0/0:11,0:7:3.48:0,3,35	./.	1/1:19,8:22:3.01:40,3,0	0/1:10,7:16:41.06:71,0,41	1/1:27,12:32:15.05:198,15,0	0/0:33,9:41:0:0,0,0	0/0:18,0:10:20.05:0,20,218	0/0:15,0:12:3.19:0,3,57	0/0:3,0:2:5.95:0,6,58
chr10	110225206	.	GAC	G	320.01	PASS	AB=0.977;AC=14;AF=0.304;AN=46;BaseQRankSum=2.795;DP=596;FS=6.677;HRun=0;HaplotypeScore=94.0768;InbreedingCoeff=0.1797;MQ=32.75;MQ0=54;MQRankSum=1.460;QD=1.26;ReadPosRankSum=-2.560;VQSLOD=0.8563;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:16,0:16:32.36:0,32,513	./.	./.	1/1:38,0:36:5.72:29,6,0	1/1:26,0:25:5.64:48,6,0	0/0:37,0:31:2.36:0,2,58	0/0:25,1:9:12.18:0,12,87	0/0:14,0:9:6.02:0,6,115	0/0:36,0:27:78.20:0,78,1383	0/0:24,0:21:30.86:0,31,599	0/1:38,0:33:58.15:58,0,250	0/1:23,0:20:44.35:44,0,143	0/1:25,0:21:34.62:35,0,36	./.	0/0:23,0:20:54.10:0,54,841	0/1:16,3:13:84.14:122,0,84	0/0:11,0:6:11.52:0,12,154	0/0:11,0:7:10.48:0,10,95	0/0:10,0:7:2.93:0,3,20	./.	1/1:24,0:20:2.88:15,3,0	0/1:15,0:14:21.14:21,0,48	1/1:36,0:30:14.34:75,14,0	0/0:40,0:39:0:0,0,0	0/0:18,0:10:19.61:0,20,267	0/1:9,0:6:16.31:16,0,38	0/0:3,0:2:5.93:0,6,72
chr10	110225214	.	CAGAG	C	248.19	PASS	AB=0.897;AC=10;AF=0.217;AN=46;BaseQRankSum=4.398;DP=574;FS=8.058;HRun=0;HaplotypeScore=99.0363;InbreedingCoeff=0.0914;MQ=31.83;MQ0=59;MQRankSum=-5.125;QD=1.47;ReadPosRankSum=-2.066;VQSLOD=1.0233;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:13,0:13:27.09:0,27,668	./.	./.	0/0:35,0:32:2.99:0,3,24	0/1:26,0:25:0.13:0,0,0	0/0:30,0:25:5.09:0,5,92	0/1:27,1:9:52.42:52,0,160	0/0:12,3:10:8.94:0,9,130	0/0:38,0:31:89.81:0,90,1778	0/0:19,0:18:39.59:0,40,881	0/0:38,0:32:24.33:0,24,518	0/0:20,0:17:20.68:0,21,460	0/0:23,0:19:6.02:0,6,128	./.	0/0:23,0:20:57.18:0,57,1374	0/1:17,1:12:64.69:77,0,65	0/1:9,2:6:45.11:45,0,150	0/1:9,2:7:13.44:13,0,99	0/1:6,4:7:0.01:0,0,0	./.	0/0:23,0:19:3:0,3,25	0/0:15,0:14:9.01:0,9,146	0/0:32,0:27:9:0,9,96	0/1:38,0:37:0:0,0,0	0/1:15,3:10:58.91:59,0,97	1/1:7,2:6:6.32:118,6,0	0/0:5,0:2:6.01:0,6,98
chr10	110225246	.	CAGAG	C	158.54	PASS	AB=0.908;AC=12;AF=0.273;AN=44;BaseQRankSum=4.517;DP=551;FS=1.208;HRun=0;HaplotypeScore=70.6738;InbreedingCoeff=0.0556;MQ=29.75;MQ0=56;MQRankSum=-4.357;QD=1.31;ReadPosRankSum=1.061;VQSLOD=1.4257;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:12,0:12:33.10:0,33,770	0/0:43,0:4:8.52:0,9,115	0/0:67,0:4:3.01:0,3,41	./.	1/1:16,0:16:2.90:23,3,0	0/0:23,0:22:2.81:0,3,17	0/1:26,0:12:8.46:8,0,191	1/1:5,2:3:3.01:38,3,0	0/0:30,0:24:69.19:0,69,1616	0/0:17,0:16:33.10:0,33,721	0/1:27,0:21:16.13:39,0,16	0/0:15,0:13:10.91:0,11,66	0/0:21,0:19:2.94:0,3,18	./.	0/0:24,0:21:57.14:0,57,1319	1/1:10,1:6:0.89:2,1,0	0/0:5,0:2:6.02:0,6,118	0/1:5,1:4:5.78:81,0,6	./.	0/0:23,0:19:3.85:0,4,9	./.	0/0:8,0:8:2.96:0,3,19	./.	0/0:31,0:30:0:0,0,0	0/1:10,3:6:27.87:28,0,36	0/1:5,2:4:33.29:33,0,39	0/1:8,0:3:15.47:28,0,15
chr10	110225258	.	GACAC	G	232.89	PASS	AB=1.000;AC=15;AF=0.341;AN=44;BaseQRankSum=4.239;DP=497;FS=0.000;HRun=0;HaplotypeScore=62.3588;InbreedingCoeff=0.4351;MQ=29.54;MQ0=49;MQRankSum=-3.718;QD=1.58;ReadPosRankSum=-1.205;VQSLOD=1.3066;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:11,0:11:27.04:0,27,621	0/1:61,0:6:1.46:1,0,88	0/0:88,0:5:2.98:0,3,21	./.	1/1:4,10:14:2.45:59,2,0	./.	0/0:17,0:11:29.94:0,30,333	1/1:10,0:6:1.33:4,1,0	0/0:30,0:26:75.13:0,75,1597	0/0:15,0:13:30.10:0,30,788	1/1:8,3:9:12.03:173,12,0	1/1:7,3:9:11.90:89,12,0	0/0:7,8:13:0:0,0,0	1/1:9,10:18:0.47:1,0,0	0/0:24,0:21:60.17:0,60,1495	0/0:6,0:2:0.47:0,0,1	0/0:4,0:3:3.55:0,4,38	0/1:9,0:6:4.32:4,0,74	./.	0/0:17,0:16:3.43:0,3,7	./.	1/1:5,0:5:2.97:20,3,0	./.	0/0:2,17:19:0.47:0,0,1	0/0:17,0:10:25.24:0,25,255	0/0:8,0:5:1.75:0,2,43	0/1:8,0:4:2.07:2,0,41
chr10	110225296	.	GAC	G	32.82	PASS	AB=0.985;AC=9;AF=0.196;AN=46;BaseQRankSum=2.203;DP=498;FS=1.315;HRun=0;HaplotypeScore=80.0653;InbreedingCoeff=0.1790;MQ=28.02;MQ0=93;MQRankSum=-1.588;QD=0.17;ReadPosRankSum=-0.032;VQSLOD=1.5079;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:21:0:0,0,0	0/0:10,0:8:14.58:0,15,288	0/1:15,0:1:0:0,0,0	./.	./.	0/0:11,0:7:3.01:0,3,38	0/0:19,0:4:0:0,0,0	0/1:36,2:17:64.13:64,0,151	0/0:17,0:13:2.96:0,3,19	0/0:31,0:26:75.18:0,75,1304	0/0:23,0:19:33.97:0,34,750	0/0:6,0:4:0:0,0,1	0/0:7,0:5:3.48:0,3,48	0/1:9,0:8:0.19:0,0,0	./.	0/0:28,0:24:66.13:0,66,1054	0/0:18,0:15:9.84:0,10,69	0/1:10,0:7:11.63:12,0,127	0/0:12,0:4:7.57:0,8,37	0/1:24,0:19:0.09:0,0,0	1/1:28,1:16:0.44:1,0,0	./.	0/0:10,0:4:3:0,3,44	./.	0/0:6,0:4:0:0,0,0	0/1:34,2:27:44.30:44,0,438	0/0:22,0:17:12.92:0,13,173	0/0:16,0:12:2.77:0,3,175
chr10	110225298	.	CAGAG	C	937.45	PASS	AB=0.888;AC=14;AF=0.292;AN=48;BaseQRankSum=3.287;DP=496;FS=33.615;HRun=0;HaplotypeScore=87.5563;InbreedingCoeff=-0.0717;MQ=28.23;MQ0=95;MQRankSum=-5.517;QD=3.72;ReadPosRankSum=2.420;VQSLOD=-0.3050;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,10:21:0:0,0,0	0/0:10,0:8:16.30:0,16,338	1/1:12,0:1:0.47:1,0,0	./.	./.	0/0:11,0:6:2.94:0,3,18	0/0:19,0:4:0.47:0,0,1	0/1:31,6:16:99:313,0,195	0/0:15,2:13:3.01:0,3,42	0/0:34,0:29:78.23:0,78,1763	0/0:23,0:19:42.14:0,42,1032	0/1:6,0:4:0:0,0,1	0/1:7,0:5:11.04:11,0,12	0/0:9,0:8:0:0,0,0	./.	0/0:26,0:23:57.15:0,57,1261	0/1:18,1:15:41.94:42,0,74	0/1:9,1:7:34.17:34,0,164	0/1:12,2:5:41.25:99,0,41	0/1:18,5:19:0.07:0,0,1	0/0:25,3:15:2.07:0,2,5	./.	0/0:10,0:4:3:0,3,29	0/1:17,1:13:0:0,0,0	0/0:8,0:6:0:0,0,0	0/1:27,9:28:99:474,0,568	0/1:21,2:18:37.90:38,0,133	0/1:13,2:12:34.92:35,0,155
chr10	110225308	.	CAGAGACAGAG	C	563.86	PASS	AB=0.952;AC=23;AF=0.442;AN=52;BaseQRankSum=4.163;DP=504;FS=7.224;HRun=0;HaplotypeScore=139.0989;InbreedingCoeff=0.2842;MQ=29.62;MQ0=95;MQRankSum=0.919;QD=2.10;ReadPosRankSum=-4.967;VQSLOD=0.0051;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:21:0:0,0,0	0/0:10,0:8:8.17:0,8,123	./.	./.	1/1:15,2:5:5.98:66,6,0	0/0:7,3:5:0:0,0,0	0/0:23,0:6:0.47:0,0,1	0/1:41,0:16:6.63:7,0,168	0/0:18,0:15:3.43:0,3,19	0/0:34,0:29:63.11:0,63,1213	0/0:24,0:20:42.14:0,42,1171	0/1:9,2:9:30.91:43,0,31	0/1:7,2:7:27:126,0,27	0/0:6,2:7:0:0,0,0	1/1:8,2:7:9.03:130,9,0	0/0:20,0:18:48.15:0,48,1238	0/0:19,0:15:10.53:0,11,113	0/1:10,0:7:0.73:1,0,123	0/1:17,0:8:5.18:5,0,53	1/1:27,0:24:2.35:31,2,0	1/1:29,0:14:0.01:1,0,0	1/1:12,1:6:9.03:135,9,0	1/1:8,2:4:2.61:62,3,0	1/1:15,3:13:3.95:49,4,0	1/1:5,3:6:2.77:46,3,0	0/0:42,0:34:9.63:0,10,777	0/0:25,0:21:8.57:0,9,78	0/1:16,0:13:6.31:6,0,339
chr10	110225314	.	CAGAG	C	662.38	PASS	AB=0.988;AC=22;AF=0.423;AN=52;BaseQRankSum=5.916;DP=538;FS=0.633;HRun=0;HaplotypeScore=132.4832;InbreedingCoeff=0.0956;MQ=30.63;MQ0=96;MQRankSum=-1.511;QD=1.93;ReadPosRankSum=-3.969;VQSLOD=1.2976;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:21:0:0,0,0	0/0:10,0:8:12.51:0,13,261	./.	./.	0/1:14,0:5:1.96:2,0,23	0/0:11,0:5:2.84:0,3,14	0/0:25,1:9:0.47:0,0,1	0/1:44,0:18:43.58:44,0,280	1/1:19,2:16:4.35:18,4,0	0/0:35,0:30:81.23:0,81,1645	0/0:25,0:21:51.17:0,51,1242	0/1:15,0:13:8.87:79,0,9	0/1:9,0:7:26.02:26,0,39	0/0:8,0:7:0:0,0,0	1/1:13,0:10:9.60:98,10,0	0/0:21,0:18:51.16:0,51,1280	0/0:17,1:15:15.16:0,15,183	0/1:11,0:8:36.67:37,0,148	0/0:21,0:12:7.82:0,8,190	1/1:29,0:25:2.36:51,2,0	1/1:28,0:13:0.68:1,1,0	1/1:13,0:6:8.83:64,9,0	0/1:11,0:5:13.38:41,0,13	0/0:19,0:14:0.34:0,0,1	1/1:12,0:10:8.84:79,9,0	0/1:46,3:41:86.83:87,0,1177	0/1:27,0:22:55.55:84,0,56	0/1:15,1:13:98.73:99,0,273
chr10	110225318	.	G	GAC	1462.41	PASS	AB=0.933;AC=27;AF=0.519;AN=52;BaseQRankSum=5.860;DP=554;FS=6.434;HRun=0;HaplotypeScore=130.6581;InbreedingCoeff=0.0566;MQ=32.00;MQ0=90;MQRankSum=0.513;QD=3.63;ReadPosRankSum=-3.380;VQSLOD=1.2412;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:22:0:0,0,0	0/0:10,0:8:15.51:0,16,209	./.	./.	0/1:14,0:7:15.28:15,0,19	0/0:12,0:6:2.76:0,3,14	1/1:29,0:12:3.46:25,3,0	0/1:41,0:19:68.98:69,0,141	0/1:17,4:16:2.96:3,0,4	0/0:34,0:31:84.23:0,84,1149	0/0:24,0:21:51.17:0,51,777	0/1:16,0:14:7.81:80,0,8	0/1:10,0:8:11.24:11,0,46	1/1:10,0:9:2.68:24,3,0	1/1:16,0:13:18.67:154,19,0	0/0:23,0:20:57.15:0,57,808	0/1:19,1:16:25.50:25,0,130	0/1:11,0:8:55.68:56,0,74	0/0:23,0:15:15.14:0,15,249	1/1:23,8:27:3:53,3,0	0/0:23,2:11:0.44:0,0,2	1/1:15,0:8:4.71:29,5,0	1/1:12,0:5:4.26:50,4,0	1/1:19,1:15:4.40:27,4,0	1/1:11,0:10:8.48:58,8,0	0/1:45,4:41:99:342,0,803	0/1:17,12:24:40.37:345,0,40	0/1:13,3:13:99:252,0,180
chr10	110225324	.	CAG	C	46.92	PASS	AB=0.928;AC=10;AF=0.192;AN=52;BaseQRankSum=1.997;DP=568;FS=6.643;HRun=0;HaplotypeScore=144.0703;InbreedingCoeff=0.0439;MQ=33.00;MQ0=84;MQRankSum=-3.711;QD=0.21;ReadPosRankSum=0.746;VQSLOD=2.2517;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,6:23:0:0,0,0	0/0:10,0:8:12.50:0,12,177	./.	./.	0/0:13,0:8:12.02:0,12,196	0/0:12,0:7:6.02:0,6,92	0/0:31,0:15:11.87:0,12,176	0/1:42,2:22:33.02:33,0,306	1/1:20,2:17:2.79:27,3,0	0/0:31,0:27:75.02:0,75,1166	0/0:23,0:22:51.16:0,51,855	0/0:17,0:15:21.04:0,21,279	0/0:12,0:10:24.08:0,24,372	0/0:14,0:13:21.05:0,21,304	0/0:15,0:13:24.06:0,24,353	0/0:23,0:20:54.18:0,54,919	0/1:18,2:16:25.10:25,0,117	0/1:11,0:8:17.74:18,0,76	0/1:20,1:15:13.25:13,0,229	0/0:29,4:28:4.62:0,5,16	0/1:23,2:12:0.01:0,0,0	0/0:17,0:11:15.02:0,15,181	0/0:11,0:5:6:0,6,70	0/0:19,0:15:5.90:0,6,94	0/0:13,0:12:15.05:0,15,209	0/0:46,2:40:4.31:0,4,808	0/1:29,2:26:7.83:8,0,109	0/1:15,2:14:46.02:46,0,254
chr10	110225338	.	GAC	G	1625.33	PASS	AB=0.807;AC=14;AF=0.259;AN=54;BaseQRankSum=6.006;DP=578;FS=15.905;HRun=0;HaplotypeScore=146.2960;InbreedingCoeff=0.1104;MQ=35.70;MQ0=74;MQRankSum=-8.291;QD=6.09;ReadPosRankSum=0.679;VQSLOD=2.6075;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,1:18:0.07:0,0,0	0/0:9,0:7:12.51:0,13,227	1/1:3,0:1:0.47:1,0,0	./.	0/0:12,0:12:21.06:0,21,403	0/0:12,0:7:6.02:0,6,116	0/0:35,0:18:18.36:0,18,345	0/1:34,6:21:99:255,0,333	1/1:15,8:18:3.66:13,4,0	0/0:32,0:30:75.01:0,75,1184	0/0:23,0:23:51.16:0,51,951	0/0:20,0:17:30:0,30,505	0/0:15,0:13:33.08:0,33,598	0/0:18,0:17:32.91:0,33,548	0/0:23,0:20:40.36:0,40,710	0/0:24,0:21:60.17:0,60,1075	0/1:17,3:16:28.11:28,0,99	0/1:11,3:11:74.36:176,0,74	0/1:12,4:14:99:141,0,303	1/1:20,14:28:5.90:90,6,0	0/0:18,4:11:3.01:0,3,34	0/0:14,0:11:15.05:0,15,289	0/0:12,0:7:12.04:0,12,205	0/0:22,0:18:14.93:0,15,277	0/0:18,0:16:24.07:0,24,412	0/1:30,12:34:99:445,0,542	0/1:14,17:26:37.34:411,0,37	0/1:10,7:16:99:207,0,261
chr10	110225340	.	CAGAG	C	575.83	PASS	AB=0.976;AC=11;AF=0.196;AN=56;BaseQRankSum=7.187;DP=586;FS=27.135;HRun=0;HaplotypeScore=156.9254;InbreedingCoeff=0.0181;MQ=37.32;MQ0=72;MQRankSum=-7.374;QD=2.15;ReadPosRankSum=-1.703;VQSLOD=1.0914;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,1:18:0:0,0,0	0/0:10,0:8:15.51:0,16,333	0/0:5,0:2:2.96:0,3,19	0/0:2,0:2:2.98:0,3,22	0/0:14,0:14:24.02:0,24,551	0/0:12,0:7:6.02:0,6,159	0/0:35,0:19:21.07:0,21,509	0/1:38,1:21:99:123,0,236	0/1:21,2:18:1.66:2,0,4	0/0:30,0:28:70.03:0,70,1319	0/0:22,0:22:48.16:0,48,1232	0/0:20,0:17:29.88:0,30,647	0/0:15,0:13:31.35:0,31,742	0/0:18,0:17:33.11:0,33,737	0/0:23,0:20:40.38:0,40,904	0/0:24,0:21:60.18:0,60,1311	0/1:19,0:16:13.01:13,0,50	0/1:13,0:10:77.47:116,0,77	0/1:19,0:17:68.79:69,0,266	1/1:33,1:28:7.93:46,8,0	0/0:22,0:11:2.55:0,3,24	0/0:14,0:11:15.05:0,15,373	0/0:12,0:7:12.02:0,12,221	0/0:22,0:18:14.92:0,15,328	0/0:18,0:16:24.08:0,24,509	0/1:43,0:34:99:177,0,498	0/1:30,1:26:42.53:72,0,43	0/1:19,0:18:95.58:96,0,259
chr10	110225370	.	CAG	C	7859.73	PASS	AC=42;AF=0.778;AN=54;BaseQRankSum=9.533;DP=649;FS=25.851;HRun=0;HaplotypeScore=146.8762;InbreedingCoeff=0.9454;MQ=56.65;MQ0=18;MQRankSum=-4.932;QD=16.41;ReadPosRankSum=4.248;VQSLOD=3.2175;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,20:25:8.96:110,9,0	0/0:9,0:8:18.06:0,18,296	0/0:30,0:20:47.65:0,48,669	0/0:31,1:20:6.77:0,7,525	1/1:4,14:18:30.10:379,30,0	1/1:4,8:11:11.93:151,12,0	1/1:7,23:26:36.12:454,36,0	1/1:19,21:35:57.15:695,57,0	./.	0/0:34,0:34:62.05:0,62,1468	0/0:21,0:21:36.11:0,36,569	1/1:5,20:22:38.32:471,38,0	1/1:1,17:18:36.05:454,36,0	1/1:4,18:21:39.12:492,39,0	1/1:4,21:24:48.15:606,48,0	0/0:28,1:27:34.42:0,34,1093	1/1:11,12:20:27.08:333,27,0	1/1:4,7:9:24.08:299,24,0	1/1:12,16:26:36.03:420,36,0	1/1:11,14:24:14.99:189,15,0	1/1:10,18:25:15.05:189,15,0	1/1:3,11:14:27.09:341,27,0	1/1:4,7:8:11.99:151,12,0	1/1:7,14:19:23.91:300,24,0	1/1:8,11:18:26.95:340,27,0	1/1:16,17:30:51.12:640,51,0	1/1:11,17:26:30.10:378,30,0	1/1:5,14:19:18.55:468,19,0
chr10	110226630	.	AC	A	11453.28	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.500;DP=721;FS=3.125;HRun=3;HaplotypeScore=81.0453;InbreedingCoeff=0.9926;MQ=83.81;MQ0=0;MQRankSum=-2.091;QD=34.50;ReadPosRankSum=-0.067;VQSLOD=5.2395;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,46:48:99:1636,126,0	0/0:9,0:9:27.09:0,27,404	0/0:28,0:28:63.22:0,63,982	0/0:15,0:15:43.38:0,43,602	0/0:24,0:24:72.24:0,72,1064	0/0:14,0:14:42.14:0,42,628	0/0:29,0:29:87.29:0,87,1300	1/1:1,27:28:81.24:1023,81,0	1/1:1,33:34:90.29:1166,90,0	0/0:29,0:29:81.26:0,81,1175	0/0:17,0:17:48.16:0,48,703	0/0:22,0:22:60.20:0,60,896	0/0:30,0:30:90.29:0,90,1326	0/0:32,0:32:96.32:0,96,1417	0/0:33,0:33:93.30:0,93,1370	0/0:23,0:23:69.23:0,69,1032	1/1:1,37:38:99:1324,102,0	1/1:0,17:17:51.17:662,51,0	1/1:1,14:15:42.12:530,42,0	1/1:1,21:22:51.17:662,51,0	1/1:1,47:48:99:1636,126,0	0/0:15,0:15:42.14:0,42,629	0/0:19,0:19:54.18:0,54,806	0/0:34,0:34:99:0,102,1485	0/0:16,0:16:48.15:0,48,701	1/1:3,32:35:9.69:1101,10,0	1/1:0,27:27:75.24:974,75,0	1/1:0,20:20:57.19:740,57,0
chr10	110227713	.	TG	T	13593.80	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=13.935;DP=761;FS=2.998;HRun=1;HaplotypeScore=77.1127;InbreedingCoeff=0.9999;MQ=81.27;MQ0=0;MQRankSum=0.821;QD=40.10;ReadPosRankSum=2.814;VQSLOD=5.6577;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,48:48:99:1930,138,0	0/0:10,0:10:30.10:0,30,478	0/0:24,0:24:63.20:0,63,924	0/0:29,0:29:75.29:0,75,1264	0/0:19,0:19:57.19:0,57,911	0/0:20,0:20:60.17:0,60,912	0/0:32,0:32:96.33:0,96,1534	1/1:0,36:36:99:1468,105,0	1/1:0,19:19:57.19:797,57,0	0/0:31,0:31:93.32:0,93,1487	0/0:17,0:17:51.17:0,51,815	0/0:19,0:19:57.19:0,57,910	0/0:26,0:26:78.25:0,78,1215	0/0:26,0:26:78.27:0,78,1247	0/0:30,0:30:90.29:0,90,1416	0/0:30,1:31:51.35:0,51,1397	1/1:0,38:38:99:1510,108,0	1/1:0,25:25:69.23:965,69,0	1/1:0,19:19:57.17:778,57,0	1/1:0,28:28:84.28:1174,84,0	1/1:0,50:50:99:1972,141,0	0/0:29,0:29:84.27:0,84,1319	0/0:23,0:23:66.22:0,66,1048	0/0:30,0:30:90.31:0,90,1439	0/0:26,0:26:78.24:0,78,1202	1/1:0,33:33:96.30:1325,96,0	1/1:0,33:33:90.30:1256,90,0	1/1:0,10:10:30.10:420,30,0
chr10	110228002	.	GATGAGAGAGAGA	G	1137.68	PASS	AB=0.850;AC=13;AF=0.232;AN=56;BaseQRankSum=-1.074;DP=460;FS=32.069;HRun=0;HaplotypeScore=196.0568;InbreedingCoeff=0.8289;MQ=69.00;MQ0=7;MQRankSum=0.192;QD=11.15;ReadPosRankSum=0.301;VQSLOD=0.9432;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:52.77:0,53,853	0/0:3,0:3:9.03:0,9,236	0/0:25,0:23:46.93:0,47,729	0/0:26,0:11:6.77:0,7,243	0/0:12,0:12:30.10:0,30,587	0/0:13,0:13:36.12:0,36,779	0/0:27,0:27:72.24:0,72,1758	0/0:21,0:21:60.20:0,60,1025	0/0:11,0:11:17.41:0,17,325	0/0:15,0:15:42.14:0,42,1042	0/0:12,0:12:30.10:0,30,517	0/1:14,2:17:11.13:361,0,11	1/1:10,1:11:12.74:135,13,0	1/1:9,0:10:9.16:153,9,0	1/1:9,2:10:18.09:262,18,0	0/0:13,0:12:39.05:0,39,1201	0/0:21,0:21:33.44:0,33,1273	0/0:17,0:17:48.15:0,48,697	0/0:15,0:15:37.66:0,38,546	0/0:19,0:19:45.15:0,45,764	0/0:15,0:15:32.05:0,32,564	1/1:10,2:13:13.70:140,14,0	1/1:21,1:22:7.44:200,7,0	1/1:17,0:17:9.78:64,10,0	0/0:9,0:9:27.09:0,27,666	0/0:18,0:18:54.15:0,54,945	0/0:18,0:18:40.07:0,40,728	0/0:12,0:11:33.11:0,33,551
chr10	110228004	.	TGA	T	358.39	PASS	AB=0.953;AC=25;AF=0.568;AN=44;BaseQRankSum=2.332;DP=462;FS=9.101;HRun=0;HaplotypeScore=114.5516;InbreedingCoeff=0.1723;MQ=68.12;MQ0=8;MQRankSum=-1.436;QD=1.45;ReadPosRankSum=-0.066;VQSLOD=1.3409;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:2.30:13,2,0	0/0:4,0:4:2.99:0,3,24	./.	0/0:26,0:11:0:0,0,0	1/1:13,1:14:3.01:32,3,0	0/0:15,0:15:2.98:0,3,21	1/1:24,2:27:12.20:97,12,0	./.	./.	0/0:14,0:14:2.04:0,2,6	0/0:12,0:12:0:0,0,0	1/1:16,0:16:8.52:42,9,0	1/1:11,0:11:2.84:14,3,0	1/1:9,0:9:2.84:14,3,0	1/1:9,0:8:5.68:28,6,0	0/1:9,3:12:69.94:92,0,70	0/1:21,0:21:33.13:33,0,47	0/1:18,0:18:4.70:5,0,36	0/1:14,0:14:4.22:23,0,4	./.	0/0:16,0:16:0:0,0,0	0/1:12,0:12:0:0,0,0	1/1:21,0:20:1.71:6,2,0	./.	1/1:8,0:9:6.88:30,7,0	./.	1/1:18,0:18:8.52:41,9,0	0/0:12,0:11:0:0,0,0
chr10	110228053	.	GAGA	G	1319.17	PASS	AB=0.991;AC=16;AF=0.286;AN=56;BaseQRankSum=13.215;DP=494;FS=4.871;HRun=0;HaplotypeScore=162.1475;InbreedingCoeff=0.6107;MQ=53.98;MQ0=10;MQRankSum=-11.432;QD=7.85;ReadPosRankSum=-6.751;VQSLOD=0.5137;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:23,3:26:40.26:352,40,0	0/0:9,0:8:18.02:0,18,214	0/0:14,0:10:30.09:0,30,379	0/0:24,0:9:27.08:0,27,342	0/0:21,0:20:47.82:0,48,599	0/0:17,0:17:36.55:0,37,448	0/0:24,0:25:56.31:0,56,590	1/1:23,0:22:17.73:63,18,0	0/1:12,0:11:3.91:86,0,4	0/0:28,0:28:75.61:0,76,970	0/0:8,0:7:18.53:0,19,241	0/0:15,0:15:26.70:0,27,453	0/0:13,0:13:29.93:0,30,426	0/0:18,0:18:36.58:0,37,531	0/0:26,0:25:56.10:0,56,745	0/0:25,0:25:65.54:0,66,888	0/1:18,0:19:69.90:70,0,87	0/1:14,0:14:53.74:57,0,54	1/1:11,0:10:15.27:94,15,0	1/1:17,0:17:30.96:230,31,0	1/1:9,0:9:20.33:160,20,0	0/0:18,0:18:33.53:0,34,412	0/0:14,0:14:33.60:0,34,333	0/0:17,0:17:42.09:0,42,522	0/0:15,0:16:1.16:0,1,222	0/0:18,0:17:2.22:0,2,51	0/1:26,1:27:40.11:221,0,40	1/1:10,0:10:20.92:177,21,0
chr10	110228056	.	A	AAG	6186.29	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=9.939;DP=524;FS=2.153;HRun=0;HaplotypeScore=164.9421;InbreedingCoeff=0.9861;MQ=60.59;MQ0=10;MQRankSum=-14.979;QD=29.74;ReadPosRankSum=-5.661;VQSLOD=4.5719;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:16,10:26:49.47:741,49,0	0/0:8,0:7:15.02:0,15,199	0/0:17,0:13:36.12:0,36,525	0/0:28,0:13:33.03:0,33,440	0/0:21,0:20:51.16:0,51,722	0/0:16,0:16:36.07:0,36,490	0/0:23,0:23:56.74:0,57,670	1/1:30,0:29:78.26:1099,78,0	1/1:15,0:14:30.07:340,30,0	0/0:28,0:28:78.09:0,78,1121	0/0:10,0:9:20.98:0,21,293	0/0:17,0:17:51.16:0,51,677	0/0:13,0:13:36.12:0,36,496	0/0:18,0:18:47.82:0,48,655	0/0:26,0:25:71.80:0,72,924	0/0:25,0:25:72.23:0,72,1020	1/1:19,3:22:32.01:445,32,0	1/1:6,7:13:39.06:520,39,0	1/1:12,0:11:24.53:325,25,0	1/1:19,0:19:50.63:592,51,0	1/1:5,4:9:22.31:263,22,0	0/0:18,0:18:32.74:0,33,469	0/0:15,0:15:38.76:0,39,432	0/0:17,0:17:42.10:0,42,597	0/0:16,0:16:32.69:0,33,372	1/1:21,0:20:8.23:624,8,0	1/1:29,1:30:79.58:882,80,0	1/1:11,0:11:27.09:356,27,0
chr10	110228073	.	C	CAAGAGTCAGGATG	34684.29	PASS	AB=0.692;AC=21;AF=0.375;AN=56;BaseQRankSum=4.073;DP=591;FS=4.959;HRun=0;HaplotypeScore=230.4626;InbreedingCoeff=0.9173;MQ=78.02;MQ0=2;MQRankSum=-17.446;QD=141.57;ReadPosRankSum=-2.496;VQSLOD=4.0240;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,17:29:63.22:4125,63,0	0/0:5,0:5:15.05:0,15,606	0/0:30,0:27:67.49:0,67,2437	0/0:35,0:26:72.25:0,72,2675	0/0:16,0:16:48.16:0,48,1918	0/0:17,0:17:51.16:0,51,1944	0/0:16,0:16:48.15:0,48,1795	1/1:26,9:39:99:5898,114,0	1/1:12,9:22:54.19:3309,54,0	0/0:31,0:31:87.26:0,87,3048	0/0:15,0:15:39.13:0,39,1498	0/0:24,0:24:69.24:0,69,2667	0/0:14,0:14:36.12:0,36,1473	0/0:17,0:17:42.14:0,42,1719	0/0:29,0:29:84.25:0,84,3296	0/0:24,0:24:72.23:0,72,2809	1/1:16,6:24:54.07:2572,54,0	1/1:8,6:14:39.13:2133,39,0	1/1:8,5:14:30.09:1543,30,0	1/1:9,10:20:39.13:2513,39,0	1/1:4,4:8:12.93:775,13,0	0/0:19,0:19:45.12:0,45,1392	0/0:17,0:17:45.15:0,45,1650	0/0:21,0:21:63.11:0,63,2403	0/0:15,0:15:45.10:0,45,1621	0/1:15,12:27:44.55:4373,0,45	1/1:17,18:37:99:5848,105,0	1/1:0,8:10:24.08:1594,24,0
chr10	110228447	.	TACACACAC	T	526.36	PASS	AB=0.637;AC=4;AF=0.077;AN=52;BaseQRankSum=3.046;DP=486;FS=0.000;HRun=0;HaplotypeScore=114.6762;InbreedingCoeff=0.3036;MQ=63.24;MQ0=23;MQRankSum=-5.238;QD=8.49;ReadPosRankSum=-1.232;VQSLOD=2.0807;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:24.01:0,24,305	0/0:6,0:5:9.02:0,9,271	./.	./.	0/0:10,5:14:2.99:0,3,24	1/1:12,6:19:15.05:357,15,0	0/1:16,13:27:28.05:210,0,28	0/0:21,0:21:13.04:0,13,154	0/0:10,0:10:1.45:0,1,76	0/0:18,0:19:28.89:0,29,665	0/0:10,0:12:21.01:0,21,586	0/0:12,0:13:12.04:0,12,400	0/0:15,0:17:29.84:0,30,852	0/0:11,0:11:12:0,12,259	0/0:11,0:13:24.06:0,24,716	0/0:10,0:11:15.52:0,16,489	0/0:31,0:31:42.49:0,42,551	0/0:18,0:18:23.29:0,23,329	0/0:9,0:9:12.04:0,12,211	0/0:11,0:11:3:0,3,28	0/0:26,0:26:20.98:0,21,328	0/0:13,0:13:15.05:0,15,581	0/0:11,0:11:21.05:0,21,652	0/0:25,0:26:44.73:0,45,1455	0/1:4,10:14:6.97:69,0,7	0/0:15,0:15:27.07:0,27,445	0/0:24,0:24:18.92:0,19,236	0/0:6,0:6:3.94:0,4,27
chr10	110228488	.	ACACG	A	3908.64	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=3.984;DP=581;FS=0.868;HRun=0;HaplotypeScore=96.2085;InbreedingCoeff=0.8181;MQ=58.29;MQ0=20;MQRankSum=0.703;QD=13.96;ReadPosRankSum=1.096;VQSLOD=3.3717;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:34:62.75:626,63,0	0/0:12,0:12:33.80:0,34,382	0/0:13,0:5:7.96:0,8,97	0/0:15,0:4:8.92:0,9,75	0/0:28,0:26:56.17:0,56,414	0/1:21,0:21:28.43:28,0,198	0/1:22,0:20:4.50:4,0,153	1/1:23,0:21:54.31:464,54,0	1/1:3,10:13:6.02:94,6,0	0/0:25,0:24:67.53:0,68,728	0/0:23,0:23:42.08:0,42,537	0/0:18,0:17:44.93:0,45,542	0/0:27,0:26:49.41:0,49,750	0/0:16,0:15:35.89:0,36,435	0/0:19,0:19:44.69:0,45,595	0/0:19,0:19:44.32:0,44,446	1/1:22,6:28:65.83:747,66,0	1/1:4,17:21:15.52:284,16,0	1/1:2,11:13:34.20:303,34,0	1/1:12,0:11:14.72:140,15,0	1/1:23,0:22:29.94:277,30,0	0/0:16,0:16:35.50:0,35,496	0/0:19,0:19:32.91:0,33,493	0/0:30,0:30:41.59:0,42,878	0/0:21,0:21:12:0,12,167	1/1:4,26:29:74.76:648,75,0	1/1:8,21:29:7.26:117,7,0	1/1:9,1:9:17.96:176,18,0
chr10	110228862	.	GA	G	2610.04	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.235;DP=524;FS=0.894;HRun=7;HaplotypeScore=88.7022;InbreedingCoeff=0.9710;MQ=51.49;MQ0=8;MQRankSum=-9.907;QD=14.50;ReadPosRankSum=-1.486;VQSLOD=3.3226;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,9:22:24.31:262,24,0	0/0:8,0:8:21.07:0,21,264	0/0:26,0:5:12.48:0,12,132	0/0:14,0:6:9.50:0,9,114	0/0:35,0:35:90.24:0,90,1090	0/0:24,0:24:66.20:0,66,817	0/0:32,0:32:75.71:0,76,941	1/1:5,14:19:50.88:481,51,0	1/1:6,8:11:23.83:233,24,0	0/0:25,0:25:60.18:0,60,739	0/0:20,0:20:57.17:0,57,698	0/0:16,0:16:39.11:0,39,477	0/0:12,0:12:33.09:0,33,402	0/0:16,0:16:48.15:0,48,604	0/0:21,0:21:54.17:0,54,679	0/0:13,0:13:36.11:0,36,442	1/1:8,12:18:35.84:331,36,0	1/1:9,7:15:18.70:289,19,0	1/1:3,6:9:18.01:173,18,0	1/1:1,7:5:12.02:117,12,0	1/1:5,6:9:9.02:91,9,0	0/0:15,0:15:45.14:0,45,566	0/0:25,0:25:66.17:0,66,806	0/0:20,0:20:54.12:0,54,648	0/0:20,0:19:54.12:0,54,648	1/1:13,10:21:44.87:398,45,0	1/1:17,9:24:30.23:294,30,0	1/1:3,6:8:17.99:165,18,0
chr10	110228865	.	A	AAATG	8108.84	PASS	AB=0.875;AC=21;AF=0.375;AN=56;BaseQRankSum=15.770;DP=563;FS=8.159;HRun=0;HaplotypeScore=125.8271;InbreedingCoeff=0.8957;MQ=51.39;MQ0=8;MQRankSum=-12.336;QD=37.37;ReadPosRankSum=-4.719;VQSLOD=3.1773;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,11:27:43.65:945,44,0	0/0:8,0:8:21.07:0,21,402	0/0:26,0:6:9.42:0,9,186	0/0:20,0:8:8.73:0,9,172	0/0:34,0:34:93.21:0,93,1719	0/0:23,0:23:69.20:0,69,1269	0/0:28,0:28:75.13:0,75,1432	1/1:28,2:29:78.18:1280,78,0	1/1:13,1:12:32.92:591,33,0	0/0:24,0:24:63.21:0,63,1166	0/0:21,0:21:60.20:0,60,1095	0/0:16,0:16:42.13:0,42,742	0/0:12,0:12:33.11:0,33,620	0/0:17,0:17:48.16:0,48,918	0/0:23,0:23:57.20:0,57,1076	0/0:14,0:14:39.10:0,39,697	1/1:16,4:17:45.14:862,45,0	0/1:18,3:20:14.14:883,0,14	1/1:13,1:14:36.07:564,36,0	1/1:11,1:9:12.04:231,12,0	1/1:9,2:9:9.03:190,9,0	0/0:16,0:16:48.16:0,48,902	0/0:24,0:24:72.24:0,72,1305	0/0:21,0:21:59.23:0,59,1054	0/0:19,0:18:54.18:0,54,989	1/1:20,6:24:63.16:1154,63,0	1/1:23,4:25:51.15:944,51,0	1/1:8,2:9:21.07:465,21,0
chr10	110228884	.	AG	A	3196.97	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.453;DP=570;FS=8.446;HRun=2;HaplotypeScore=101.5319;InbreedingCoeff=0.9691;MQ=58.04;MQ0=7;MQRankSum=-14.213;QD=14.87;ReadPosRankSum=-3.975;VQSLOD=1.6458;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,9:27:21.52:382,22,0	0/0:8,0:8:24.08:0,24,351	0/0:31,0:12:13.51:0,14,420	0/0:26,0:14:30.54:0,31,393	0/0:29,0:29:84.22:0,84,1172	0/0:20,0:20:60.20:0,60,897	0/0:37,0:37:99:0,108,1539	1/1:10,11:24:54.49:556,54,0	1/1:6,5:10:18.90:183,19,0	0/0:19,0:19:57.19:0,57,850	0/0:16,0:16:48.16:0,48,717	0/0:16,0:16:48.16:0,48,718	0/0:11,0:11:33.09:0,33,473	0/0:20,0:20:60.19:0,60,878	0/0:20,0:20:57.19:0,57,854	0/0:16,0:16:48.08:0,48,651	1/1:12,6:15:27.03:304,27,0	1/1:8,5:15:27.64:359,28,0	1/1:11,8:20:34.66:400,35,0	1/1:11,2:13:16.16:158,16,0	1/1:3,7:9:14.89:129,15,0	0/0:19,0:19:54.13:0,54,746	0/0:30,0:30:87.29:0,87,1285	0/0:19,0:19:54.17:0,54,788	0/0:18,0:17:51.17:0,51,756	1/1:12,13:26:58.16:517,58,0	1/1:7,11:20:23.39:316,23,0	1/1:8,3:13:4.11:113,4,0
chr10	110228889	.	AG	A	3747.88	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.272;DP=579;FS=5.824;HRun=1;HaplotypeScore=101.0007;InbreedingCoeff=0.9919;MQ=64.73;MQ0=3;MQRankSum=-14.353;QD=17.04;ReadPosRankSum=-5.203;VQSLOD=2.0819;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:29:29.44:418,29,0	0/0:8,0:8:24.08:0,24,343	0/0:31,0:18:35.76:0,36,503	0/0:26,0:15:33.53:0,34,434	0/0:24,0:24:72.21:0,72,990	0/0:20,0:20:60.20:0,60,854	0/0:38,0:38:99:0,111,1401	1/1:27,0:26:60.49:611,60,0	1/1:11,0:9:20.86:179,21,0	0/0:19,0:19:57.19:0,57,799	0/0:16,0:16:47.92:0,48,619	0/0:18,0:18:54.05:0,54,689	0/0:13,0:13:39.11:0,39,537	0/0:19,0:19:57.17:0,57,794	0/0:22,0:22:63.16:0,63,845	0/0:16,0:16:48.15:0,48,667	1/1:18,0:15:28.30:298,28,0	1/1:17,0:16:39.43:391,39,0	1/1:22,0:21:37.77:406,38,0	1/1:8,11:16:25.36:204,25,0	1/1:11,0:10:14.92:136,15,0	0/0:20,0:20:57.16:0,57,777	0/0:30,0:30:87.25:0,87,1185	0/0:21,0:21:60.15:0,60,800	0/0:18,0:18:54.09:0,54,705	1/1:29,0:25:61.14:566,61,0	1/1:22,0:20:33.56:371,34,0	1/1:11,1:11:12.17:167,12,0
chr10	110229969	.	TGTGA	T	15137.86	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.023;DP=718;FS=8.252;HRun=0;HaplotypeScore=124.4540;InbreedingCoeff=0.9991;MQ=81.88;MQ0=1;MQRankSum=-9.978;QD=47.45;ReadPosRankSum=2.009;VQSLOD=5.7026;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,53:56:99:2169,115,0	0/0:7,0:7:21.07:0,21,575	0/0:31,0:30:84.26:0,84,2056	0/0:24,0:24:66.23:0,66,1583	0/0:17,0:17:51.18:0,51,1394	0/0:29,0:29:84.29:0,84,2245	0/0:22,0:22:66.23:0,66,1731	1/1:1,39:40:99:2071,114,0	1/1:2,22:24:60.21:1161,60,0	0/0:27,0:27:81.28:0,81,2219	0/0:16,0:16:45.14:0,45,1174	0/0:35,0:35:96.33:0,96,2610	0/0:18,0:18:54.15:0,54,1278	0/0:24,0:24:69.24:0,69,1890	0/0:22,0:22:66.21:0,66,1740	0/0:26,0:26:78.27:0,78,2096	1/1:3,33:36:84.29:1623,84,0	1/1:1,22:23:60.21:1162,60,0	1/1:2,10:12:33.11:636,33,0	1/1:1,17:18:48.16:928,48,0	1/1:2,34:36:75.26:1452,75,0	0/0:27,0:27:81.26:0,81,2115	0/0:27,0:27:72.25:0,72,1971	0/0:27,0:27:78.27:0,78,2110	0/0:20,0:20:60.21:0,60,1618	1/1:1,28:29:81.28:1569,81,0	1/1:2,35:37:99:1906,99,0	1/1:0,8:8:24.08:460,24,0
chr10	110230405	.	TGGG	T	7023.71	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-11.081;DP=523;FS=7.167;HRun=9;HaplotypeScore=104.6691;InbreedingCoeff=0.9636;MQ=73.43;MQ0=0;MQRankSum=-2.637;QD=29.39;ReadPosRankSum=2.861;VQSLOD=3.3797;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,27:33:72.22:1019,72,0	0/0:8,0:8:24.08:0,24,490	0/0:11,0:10:23.93:0,24,343	0/0:18,0:18:40.19:0,40,632	0/0:3,0:13:12.77:0,13,30	0/0:3,0:20:18.69:0,19,42	0/0:0,0:27:27.41:0,27,61	1/1:6,15:21:42.10:578,42,0	1/1:2,17:19:51.16:718,51,0	0/0:17,0:17:30.01:0,30,521	0/0:9,0:9:27.09:0,27,561	0/0:1,0:19:21.30:0,21,62	0/0:1,0:14:12.46:0,12,28	0/0:2,0:22:22.43:0,22,50	0/0:3,0:20:24.02:0,24,74	0/0:9,0:9:21.07:0,21,446	1/1:4,30:34:69.13:970,69,0	1/1:5,23:28:60.19:851,60,0	1/1:2,11:13:30.03:368,30,0	1/1:2,9:11:24.07:339,24,0	1/1:6,34:40:63.64:895,64,0	0/0:1,0:10:9.97:0,10,22	0/0:2,0:9:5.87:0,6,14	0/0:6,0:36:34.89:0,35,78	0/0:5,0:21:20.44:0,20,65	1/1:3,13:16:39.07:520,39,0	1/1:2,15:17:39.13:553,39,0	1/1:2,5:7:15.05:213,15,0
chr10	110230412	.	GGGT	G	2945.88	PASS	AB=0.993;AC=18;AF=0.321;AN=56;BaseQRankSum=-4.508;DP=504;FS=0.754;HRun=0;HaplotypeScore=115.2784;InbreedingCoeff=0.7353;MQ=72.70;MQ0=0;MQRankSum=-3.074;QD=12.98;ReadPosRankSum=5.282;VQSLOD=3.3174;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,1:30:30.46:497,30,0	0/0:8,0:8:24.08:0,24,469	0/0:11,0:10:9.54:0,10,337	0/0:20,0:19:34.73:0,35,651	0/0:12,0:12:21.56:0,22,106	0/0:18,0:18:34.14:0,34,112	0/0:31,0:31:63.36:0,63,274	0/1:18,0:18:2.12:226,0,2	1/1:17,0:17:50.65:383,51,0	0/0:12,0:12:21.03:0,21,396	0/0:11,0:11:33.07:0,33,572	0/0:20,0:20:39.49:0,39,191	0/0:15,0:15:28.40:0,28,120	0/0:22,0:22:47.59:0,48,191	0/0:21,0:21:41.62:0,42,153	0/0:9,0:9:26.81:0,27,464	0/1:34,1:35:6.61:419,0,7	1/1:25,1:26:19.45:386,19,0	0/1:16,0:16:81.27:85,0,81	1/1:10,1:11:23.85:201,24,0	0/1:37,0:37:1.36:319,0,1	0/0:10,0:10:21.51:0,22,86	0/0:9,0:9:11.86:0,12,40	0/0:31,0:31:64.82:0,65,212	0/0:17,0:17:27.84:0,28,92	1/1:15,1:16:11.77:267,12,0	1/1:16,0:16:21.67:259,22,0	1/1:5,0:5:14.85:102,15,0
chr10	110230413	.	GGT	G	1867.65	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-3.808;DP=507;FS=21.184;HRun=0;HaplotypeScore=109.9299;InbreedingCoeff=0.5696;MQ=72.14;MQ0=0;MQRankSum=1.422;QD=8.05;ReadPosRankSum=3.710;VQSLOD=1.6474;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:13.65:0,14,128	0/0:8,0:8:24.07:0,24,363	0/0:11,0:10:6.40:0,6,317	0/0:20,0:19:24.35:0,24,543	1/1:11,1:12:11.25:155,11,0	1/1:18,1:19:20.03:175,20,0	0/1:31,0:31:11.99:209,0,12	0/0:18,0:18:21.17:0,21,114	0/0:18,0:18:19.10:0,19,84	0/0:12,0:12:21.03:0,21,330	0/0:11,0:11:31.63:0,32,450	0/1:20,0:20:18.74:165,0,19	0/1:15,0:15:14.12:138,0,14	1/1:22,0:22:23.31:227,23,0	1/1:18,2:20:16.72:234,17,0	0/0:10,0:10:29.81:0,30,414	0/0:35,0:35:30.99:0,31,187	0/0:26,0:26:24.04:0,24,134	0/0:16,0:16:31.92:0,32,178	0/1:11,0:11:7.44:7,0,15	0/0:38,0:38:57.01:0,57,250	1/1:10,0:10:0.45:87,0,0	1/1:9,0:9:13.42:58,13,0	1/1:30,1:31:76.48:366,76,0	1/1:16,0:16:39.80:235,40,0	0/1:16,0:16:8.70:9,0,66	0/0:17,0:17:23.51:0,24,104	0/0:5,0:5:8.76:0,9,28
chr10	110230718	.	AGAG	A	6329.26	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=17.567;DP=574;FS=0.349;HRun=0;HaplotypeScore=165.6219;InbreedingCoeff=0.9829;MQ=69.04;MQ0=0;MQRankSum=-16.868;QD=40.83;ReadPosRankSum=4.059;VQSLOD=5.4277;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:64.80:922,65,0	0/0:11,0:11:33.11:0,33,808	0/0:29,0:27:81.26:0,81,1798	0/0:37,0:33:90.03:0,90,2139	0/0:18,0:18:54.19:0,54,1272	0/0:21,0:21:63.22:0,63,1527	0/0:20,0:20:60.19:0,60,1375	1/1:0,15:17:51.15:762,51,0	1/1:0,18:18:54.17:761,54,0	0/0:35,0:35:99:0,105,2551	0/0:19,0:19:57.20:0,57,1405	0/0:28,0:28:84.29:0,84,2048	0/0:30,0:30:90.31:0,90,2166	0/0:16,0:16:45.15:0,45,1109	0/0:29,0:29:87.27:0,87,2008	0/0:34,0:34:99:0,102,2415	1/1:0,8:8:21.07:296,21,0	1/1:0,9:9:27.09:403,27,0	1/1:2,7:9:27.04:366,27,0	1/1:0,19:22:60.17:814,60,0	1/1:1,6:7:18.06:249,18,0	0/0:22,0:22:66.23:0,66,1561	0/0:23,0:23:69.24:0,69,1607	0/0:26,0:26:78.27:0,78,1889	0/0:21,0:21:63.22:0,63,1512	1/1:1,19:20:60.20:897,60,0	1/1:1,16:17:51.17:765,51,0	1/1:2,1:3:6.02:97,6,0
chr10	110230724	.	A	AT	1568.42	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=17.516;DP=555;FS=1.151;HRun=1;HaplotypeScore=156.3720;InbreedingCoeff=0.9668;MQ=63.72;MQ0=0;MQRankSum=-17.273;QD=10.97;ReadPosRankSum=4.671;VQSLOD=2.0834;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:61.16:256,61,0	0/0:11,0:11:32.84:0,33,401	0/0:27,0:24:66.21:0,66,834	0/0:36,0:32:87.21:0,87,1062	0/0:18,0:18:54.16:0,54,685	0/0:23,0:23:66.21:0,66,854	0/0:18,0:18:51.17:0,51,662	1/1:0,15:15:44.19:280,44,0	1/1:1,17:18:37.29:181,37,0	0/0:36,0:36:99:0,105,1363	0/0:21,0:21:60.16:0,60,748	0/0:27,0:27:81.25:0,81,1037	0/0:28,0:28:84.26:0,84,1074	0/0:17,0:17:48.14:0,48,608	0/0:28,0:28:84.27:0,84,1089	0/0:34,0:34:99:0,102,1310	1/1:0,8:8:18.40:76,18,0	1/1:0,9:9:25.22:135,25,0	1/1:0,7:7:11.74:100,12,0	1/1:0,19:19:48.24:188,48,0	1/1:0,6:6:15.64:60,16,0	0/0:20,0:20:60.18:0,60,765	0/0:20,0:20:57.17:0,57,725	0/0:26,0:26:75.21:0,75,943	0/0:22,0:22:66.21:0,66,855	1/1:1,19:21:33.68:274,34,0	1/1:0,16:16:44.88:224,45,0	1/1:0,1:1:2.84:14,3,0
chr10	110230728	.	C	CA	5020.35	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=19.787;DP=635;FS=9.375;HRun=0;HaplotypeScore=189.9685;InbreedingCoeff=0.9845;MQ=59.77;MQ0=0;MQRankSum=-19.140;QD=24.14;ReadPosRankSum=1.198;VQSLOD=3.9004;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,23:33:80.57:618,81,0	0/0:13,0:13:36.09:0,36,469	0/0:28,0:25:69.20:0,69,936	0/0:34,0:30:81.26:0,81,1131	0/0:18,0:18:51.17:0,51,713	0/0:23,0:23:69.22:0,69,947	0/0:20,0:20:57.18:0,57,780	1/1:11,15:26:78.02:734,78,0	1/1:5,17:22:61.40:528,61,0	0/0:37,0:37:99:0,111,1552	0/0:19,0:19:57.19:0,57,797	0/0:30,0:30:87.26:0,87,1179	0/0:28,0:28:84.24:0,84,1121	0/0:18,0:18:48.16:0,48,670	0/0:32,0:32:93.27:0,93,1249	0/0:34,0:34:99:0,102,1409	1/1:1,8:9:26.89:235,27,0	1/1:2,9:11:29.98:261,30,0	1/1:8,7:15:39.51:413,40,0	1/1:2,19:21:62.38:470,62,0	1/1:5,6:11:26.84:203,27,0	0/0:23,0:23:66.21:0,66,905	0/0:19,0:19:57.19:0,57,796	0/0:26,0:26:78.24:0,78,1072	0/0:25,0:25:72.23:0,72,989	1/1:15,19:34:59.92:867,60,0	1/1:7,16:23:68.91:620,69,0	1/1:1,1:2:6:71,6,0
chr10	110231458	.	ATC	A	577.59	PASS	AB=0.938;AC=13;AF=0.310;AN=42;BaseQRankSum=6.922;DP=206;FS=65.561;HRun=0;HaplotypeScore=44.7680;InbreedingCoeff=-0.3224;MQ=52.63;MQ0=12;MQRankSum=-1.750;QD=5.07;ReadPosRankSum=-1.062;VQSLOD=-0.4363;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:4:11.40:0,11,83	0/1:12,0:6:5.12:5,0,39	0/1:11,0:7:25.34:25,0,81	0/1:8,4:12:79.89:80,0,229	0/1:10,0:9:81.63:82,0,242	0/0:9,7:16:21.02:0,21,299	0/0:4,0:4:11.78:0,12,73	./.	0/0:13,0:11:33.10:0,33,495	0/0:16,2:17:13.40:0,13,477	0/0:8,0:8:8.60:0,9,187	0/1:7,0:7:99:100,0,123	0/1:13,0:13:99:103,0,110	0/1:8,0:8:56.45:56,0,113	0/0:13,0:12:20.49:0,20,489	1/1:2,0:1:1.25:3,1,0	0/1:3,0:3:14.09:26,0,14	./.	./.	./.	0/1:7,1:6:58.05:58,0,115	0/1:11,1:12:21.28:21,0,150	0/0:9,0:8:8.92:0,9,112	0/1:11,3:12:99:147,0,201	0/0:3,0:2:5.89:0,6,64	./.	./.
chr10	110232535	.	AC	A	8020.12	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=20.200;DP=636;FS=8.965;HRun=1;HaplotypeScore=123.2232;InbreedingCoeff=0.9988;MQ=67.34;MQ0=2;MQRankSum=-5.340;QD=30.97;ReadPosRankSum=0.962;VQSLOD=3.6666;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,30:39:93.08:1063,93,0	0/0:17,0:17:51.17:0,51,761	0/0:30,0:25:71.96:0,72,994	0/0:22,0:17:37.93:0,38,527	0/0:26,0:26:78.19:0,78,1081	0/0:23,0:23:69.22:0,69,1006	0/0:18,0:18:54.15:0,54,766	1/1:5,25:30:48.02:750,48,0	1/1:1,22:23:17.89:678,18,0	0/0:27,0:27:81.19:0,81,1129	0/0:21,0:21:63.20:0,63,921	0/0:20,0:20:60.20:0,60,897	0/0:27,0:27:81.26:0,81,1188	0/0:18,0:18:54.17:0,54,781	0/0:29,0:29:87.25:0,87,1240	0/0:17,0:17:51.17:0,51,763	1/1:0,21:21:57.13:701,57,0	1/1:0,20:20:60.19:740,60,0	1/1:9,18:25:70.65:793,71,0	1/1:0,16:16:44.27:499,44,0	1/1:0,17:17:39.12:483,39,0	0/0:28,0:28:81.26:0,81,1191	0/0:17,0:17:51.14:0,51,722	0/0:19,0:19:57.19:0,57,852	0/0:18,0:18:51.16:0,51,743	1/1:0,26:26:75.03:884,75,0	1/1:2,23:25:72.19:865,72,0	1/1:0,15:15:45.14:565,45,0
chr10	110232540	.	AC	A	7853.52	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=19.961;DP=639;FS=1.769;HRun=2;HaplotypeScore=124.0424;InbreedingCoeff=0.9985;MQ=68.26;MQ0=0;MQRankSum=-6.698;QD=29.86;ReadPosRankSum=1.304;VQSLOD=4.5144;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:35,2:37:89.13:973,89,0	0/0:18,0:18:54.14:0,54,765	0/0:31,0:26:68.96:0,69,984	0/0:18,0:15:24.30:0,24,489	0/0:26,0:26:78.23:0,78,1123	0/0:24,0:24:69.22:0,69,1009	0/0:17,0:17:51.14:0,51,723	1/1:29,1:30:63.18:750,63,0	1/1:26,0:26:17.92:666,18,0	0/0:23,0:23:63.21:0,63,922	0/0:22,0:22:66.21:0,66,962	0/0:20,0:20:60.20:0,60,897	0/0:27,0:27:78.25:0,78,1148	0/0:15,0:15:45.15:0,45,672	0/0:28,0:28:84.28:0,84,1258	0/0:19,0:19:57.18:0,57,831	1/1:24,0:24:61.04:708,61,0	1/1:22,1:23:65.23:781,65,0	1/1:23,0:23:66.14:768,66,0	1/1:16,0:16:38.98:448,39,0	1/1:18,1:19:45.08:520,45,0	0/0:30,0:30:90.24:0,90,1280	0/0:18,0:18:54.17:0,54,780	0/0:21,0:21:63.20:0,63,920	0/0:19,0:19:57.10:0,57,808	1/1:25,0:25:69.18:812,69,0	1/1:24,1:25:75.21:881,75,0	1/1:15,0:15:45.14:548,45,0
chr10	110233445	.	CT	C	1092.88	PASS	AB=0.871;AC=12;AF=0.231;AN=52;BaseQRankSum=1.436;DP=253;FS=15.433;HRun=1;HaplotypeScore=75.1923;InbreedingCoeff=0.1606;MQ=36.30;MQ0=4;MQRankSum=-3.286;QD=17.92;ReadPosRankSum=2.272;VQSLOD=2.6756;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:8.98:0,9,124	0/0:1,0:1:3.01:0,3,48	./.	0/0:5,0:2:4.26:0,4,48	1/1:1,1:2:3.48:41,3,0	0/1:10,3:13:57.92:265,0,58	1/1:3,1:4:6.02:81,6,0	0/0:25,0:24:71.43:0,71,1014	0/0:15,0:15:8.98:0,9,117	0/0:12,0:12:30.99:0,31,467	0/0:11,0:11:21.06:0,21,336	0/1:7,0:7:38.74:145,0,39	0/1:5,2:7:66.84:67,0,108	0/1:5,0:5:34.55:72,0,35	0/1:8,2:10:66.22:183,0,66	0/0:14,0:14:26.97:0,27,404	0/0:9,0:9:12.03:0,12,146	0/0:6,0:6:6.01:0,6,58	0/0:15,0:12:36.08:0,36,420	0/0:17,0:17:8.90:0,9,100	0/0:6,0:5:9.03:0,9,125	0/0:1,0:1:3.01:0,3,44	0/1:6,2:8:21.82:223,0,22	./.	1/1:4,1:5:12.04:163,12,0	0/0:11,0:11:33.09:0,33,435	0/0:21,0:21:27.02:0,27,366	0/0:8,0:8:24.05:0,24,276
chr10	110233464	.	G	GA	693.60	PASS	AC=28;AF=1.000;AN=28;DP=165;FS=0.000;HRun=0;HaplotypeScore=62.4792;InbreedingCoeff=0.2247;MQ=31.45;MQ0=0;QD=5.88;VQSLOD=2.9382;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:0,1:1:0.47:1,0,0	./.	./.	1/1:1,13:14:40.09:211,40,0	1/1:8,7:15:5.84:39,6,0	1/1:0,9:9:20.02:103,20,0	1/1:0,7:7:5.78:31,6,0	./.	1/1:0,6:6:5.80:33,6,0	./.	./.	1/1:0,10:10:2.74:12,3,0	1/1:1,1:2:2.84:14,3,0	./.	1/1:3,3:6:17.22:89,17,0	1/1:4,7:11:2.97:20,3,0	./.	./.	1/1:0,6:6:0.47:1,0,0	./.	./.	1/1:0,7:7:20.20:108,20,0	1/1:5,14:19:17.15:86,17,0	1/1:0,5:5:2.96:19,3,0
chr10	110238857	.	AC	A	10865.02	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.448;DP=650;FS=5.477;HRun=1;HaplotypeScore=70.3018;InbreedingCoeff=0.9997;MQ=82.22;MQ0=0;MQRankSum=-1.891;QD=38.94;ReadPosRankSum=3.038;VQSLOD=5.6289;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:99:1502,108,0	0/0:10,0:10:30.10:0,30,479	0/0:25,0:25:69.22:0,69,1031	0/0:24,0:24:51.04:0,51,842	0/0:24,0:24:69.22:0,69,1080	0/0:19,0:19:57.19:0,57,908	0/0:21,0:21:63.21:0,63,998	1/1:1,28:29:84.26:1143,84,0	1/1:0,18:18:48.16:671,48,0	0/0:26,0:26:78.26:0,78,1217	0/0:17,0:17:48.16:0,48,760	0/0:36,0:36:99:0,105,1650	0/0:23,0:23:69.24:0,69,1096	0/0:25,0:25:75.26:0,75,1196	0/0:17,0:17:51.16:0,51,789	0/0:19,0:19:57.19:0,57,909	1/1:1,33:34:87.29:1217,87,0	1/1:0,20:20:60.20:839,60,0	1/1:0,32:32:96.32:1341,96,0	1/1:0,26:26:66.22:923,66,0	1/1:0,16:16:45.15:629,45,0	0/0:26,0:26:75.26:0,75,1191	0/0:19,0:19:54.18:0,54,853	0/0:30,0:30:87.27:0,87,1346	0/0:10,0:10:30.10:0,30,480	1/1:0,15:15:45.15:629,45,0	1/1:0,40:40:99:1594,114,0	1/1:0,11:11:27.09:378,27,0
chr10	110239080	.	GCCCCC	G	6379.38	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-5.695;DP=437;FS=9.216;HRun=14;HaplotypeScore=106.0674;InbreedingCoeff=0.8524;MQ=74.60;MQ0=2;MQRankSum=-5.282;QD=28.35;ReadPosRankSum=2.676;VQSLOD=3.3338;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,32:40:65.56:995,66,0	0/0:4,0:4:5.96:0,6,43	0/0:28,0:17:33.40:0,33,441	0/0:22,0:15:16.51:0,17,211	0/0:3,0:3:3.48:0,3,85	0/0:7,0:7:9.02:0,9,174	0/0:21,0:21:32.14:0,32,528	1/1:6,20:27:43.11:764,43,0	1/1:1,19:20:54.17:894,54,0	0/1:7,0:7:0:0,0,0	0/0:6,0:6:9.03:0,9,165	0/0:4,0:13:12.24:0,12,110	0/0:6,0:14:15.36:0,15,101	0/0:5,0:11:10.63:0,11,44	0/0:8,0:21:38.20:0,38,295	0/0:6,0:6:9.03:0,9,195	1/1:3,14:17:33.01:546,33,0	1/1:1,12:13:15.03:248,15,0	1/1:7,13:21:35.42:505,35,0	1/1:2,11:13:27.01:444,27,0	1/1:9,14:23:17.94:298,18,0	0/0:3,0:8:8.15:0,8,36	0/0:5,0:15:16.42:0,16,107	0/0:4,0:27:38.21:0,38,188	0/0:3,0:3:9.02:0,9,155	1/1:3,10:13:30.07:469,30,0	1/1:1,26:27:72.10:1192,72,0	1/1:4,0:4:2.93:23,3,0
chr10	110239092	.	CCCA	C	668.64	PASS	AB=0.974;AC=15;AF=0.288;AN=52;BaseQRankSum=6.349;DP=420;FS=13.653;HRun=0;HaplotypeScore=100.1743;InbreedingCoeff=-0.1672;MQ=65.73;MQ0=2;MQRankSum=-7.301;QD=2.56;ReadPosRankSum=7.357;VQSLOD=0.1667;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:36:9.04:9,0,84	./.	0/0:29,0:15:25.35:0,25,290	0/1:19,0:10:8.85:9,0,130	0/0:3,0:3:6.48:0,6,84	0/0:6,0:6:2.99:0,3,24	0/0:19,0:19:30.06:0,30,314	0/0:22,0:22:1.87:0,2,54	0/1:22,0:22:27.65:28,0,28	0/0:5,0:5:6.01:0,6,55	0/0:6,0:6:6.01:0,6,60	0/1:15,1:16:52.99:81,0,53	0/1:12,2:14:3.86:171,0,4	0/1:10,0:10:29.09:55,0,29	0/1:14,3:17:1.82:158,0,2	0/0:7,0:7:11.22:0,11,93	0/1:18,0:18:1.29:1,0,42	0/0:17,0:17:17.71:0,18,125	0/0:17,0:17:2.22:0,2,98	0/1:19,0:19:4.61:5,0,101	0/0:18,0:18:10.72:0,11,84	1/1:6,0:6:8.52:50,9,0	0/1:14,0:14:39.17:67,0,39	0/1:29,0:29:56.89:142,0,57	0/0:6,0:6:11.63:0,12,80	0/1:11,0:11:0.80:1,0,33	0/1:30,0:30:30.29:30,0,45	./.
chr10	110239794	.	C	CGTGTGTGTGCGTGTGT	8789.89	PASS	AB=0.985;AC=43;AF=0.768;AN=56;BaseQRankSum=-0.251;DP=665;FS=7.415;HRun=0;HaplotypeScore=238.9173;InbreedingCoeff=0.5169;MQ=61.77;MQ0=6;MQRankSum=-2.465;QD=15.56;ReadPosRankSum=-3.781;VQSLOD=1.7459;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,14:45:3.01:231,3,0	0/0:9,0:9:9.07:0,9,614	0/0:26,0:17:29.15:0,29,305	0/0:30,0:23:30.73:0,31,374	1/1:16,0:16:32.26:266,32,0	1/1:5,0:30:3.01:173,3,0	1/1:31,0:31:45.04:522,45,0	1/1:38,0:37:91.73:1237,92,0	1/1:21,0:22:32.86:600,33,0	0/1:20,0:21:5.52:6,0,534	0/0:14,0:14:27.01:0,27,542	1/1:18,0:18:0.33:151,0,0	1/1:20,0:20:28.52:323,29,0	1/1:19,0:19:8.68:48,9,0	0/1:24,0:24:25.21:109,0,25	0/0:19,0:21:36.07:0,36,1666	1/1:32,0:31:68.88:714,69,0	1/1:5,12:25:9:470,9,0	1/1:20,0:20:37.78:624,38,0	1/1:6,10:23:3.48:232,3,0	1/1:43,0:43:35.03:389,35,0	1/1:15,0:15:7.22:27,7,0	1/1:14,0:14:20.80:180,21,0	0/1:34,0:34:99:101,0,179	1/1:23,0:23:29.41:587,29,0	1/1:33,0:32:74.94:1545,75,0	1/1:4,5:17:2.38:231,2,0	1/1:1,0:1:2.99:24,3,0
chr10	110239798	.	T	TGTGTGC	6600.65	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=-1.779;DP=652;FS=4.150;HRun=0;HaplotypeScore=144.4793;InbreedingCoeff=0.4186;MQ=56.26;MQ0=10;MQRankSum=-0.429;QD=12.50;ReadPosRankSum=2.995;VQSLOD=4.1284;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:41:18.95:74,0,19	0/0:9,0:9:26.53:0,27,439	0/0:24,0:13:29.15:0,29,305	0/0:35,0:23:37.22:0,37,430	1/1:16,0:16:25.54:176,26,0	0/1:27,0:27:11.64:77,0,12	1/1:31,0:32:32.10:270,32,0	0/1:38,0:37:84.32:401,0,84	1/1:21,0:21:7.77:187,8,0	0/0:23,0:23:49.94:0,50,531	0/0:13,0:13:30:0,30,381	1/1:2,16:19:26.98:754,27,0	1/1:3,17:22:30.10:892,30,0	1/1:5,13:18:9.03:242,9,0	1/1:3,21:25:27.09:814,27,0	0/0:20,0:20:36.14:0,36,968	1/1:34,0:33:4.56:474,5,0	0/1:25,0:24:17.29:74,0,17	1/1:17,0:17:31.56:272,32,0	1/1:18,0:18:1:78,1,0	1/1:43,0:43:30.15:318,30,0	1/1:1,16:18:9.03:288,9,0	1/1:12,1:13:20.97:274,21,0	1/1:13,21:35:19.41:427,19,0	0/1:21,0:21:27.60:92,0,28	1/1:32,0:30:13.19:317,13,0	0/1:12,0:12:17.15:77,0,17	1/1:1,0:1:2.99:24,3,0
chr10	110239800	.	T	TGTGC	4881.02	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-0.417;DP=637;FS=1.976;HRun=0;HaplotypeScore=128.7214;InbreedingCoeff=0.1912;MQ=52.88;MQ0=15;MQRankSum=-1.384;QD=9.57;ReadPosRankSum=4.549;VQSLOD=4.1803;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:40:27.19:52,0,27	0/0:9,0:9:26.53:0,27,395	0/0:25,0:12:29.15:0,29,305	0/0:36,0:21:37.42:0,37,424	1/1:18,0:18:0.67:123,1,0	1/1:26,0:26:2.85:56,3,0	0/1:31,0:31:2.73:213,0,3	0/1:36,0:35:99:319,0,147	1/1:21,0:21:1.13:145,1,0	0/0:23,0:23:53.73:0,54,542	0/0:14,0:14:30:0,30,343	1/1:17,1:18:5.52:482,6,0	1/1:21,1:22:7.17:520,7,0	1/1:14,1:15:11.40:193,11,0	1/1:21,2:23:6.16:537,6,0	0/0:20,0:20:39.14:0,39,841	0/1:32,0:31:15.20:379,0,15	0/1:23,0:22:44.51:45,0,45	1/1:17,0:16:20.44:236,20,0	0/1:16,0:16:20.46:48,0,20	1/1:44,0:44:26.14:308,26,0	1/1:17,0:17:9.03:150,9,0	1/1:12,1:13:20.18:183,20,0	1/1:29,3:33:23.23:466,23,0	0/1:20,0:20:51.06:89,0,51	0/1:32,0:30:53.62:263,0,54	0/1:12,0:12:19.06:50,0,19	1/1:1,0:1:2.99:24,3,0
chr10	110240194	.	A	AG	8788.54	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=2.152;DP=528;FS=0.718;HRun=1;HaplotypeScore=124.3489;InbreedingCoeff=0.9966;MQ=79.87;MQ0=0;MQRankSum=-6.857;QD=39.41;ReadPosRankSum=-0.255;VQSLOD=4.3491;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:60.16:873,60,0	0/0:8,0:8:21.07:0,21,273	0/0:17,0:17:42.11:0,42,538	0/0:26,0:26:67.79:0,68,821	0/0:24,0:24:63.20:0,63,818	0/0:11,0:11:15.05:0,15,195	0/0:21,0:21:60.20:0,60,778	1/1:3,30:33:96.26:1432,96,0	1/1:0,16:16:48.16:712,48,0	0/0:24,0:24:69.22:0,69,896	0/0:13,0:13:33.09:0,33,414	0/0:22,0:22:63.19:0,63,804	0/0:19,0:19:57.14:0,57,721	0/0:11,0:11:27.09:0,27,351	0/0:17,0:17:45.13:0,45,570	0/0:14,0:14:39.13:0,39,506	1/1:0,21:20:57.19:853,57,0	1/1:1,16:16:42.14:629,42,0	1/1:4,20:24:63.16:895,63,0	1/1:1,18:19:51.17:763,51,0	1/1:1,16:17:42.10:604,42,0	0/0:21,0:21:57.19:0,57,740	0/0:23,0:23:57.19:0,57,740	0/0:20,0:20:42.09:0,42,524	0/0:14,0:14:42.14:0,42,545	1/1:1,20:21:24.24:860,24,0	1/1:0,21:21:48.16:718,48,0	1/1:0,10:10:30.10:449,30,0
chr10	110240230	.	CTT	C	1435.62	PASS	AB=0.822;AC=18;AF=0.321;AN=56;BaseQRankSum=7.563;DP=430;FS=2.425;HRun=6;HaplotypeScore=111.9283;InbreedingCoeff=0.6364;MQ=53.25;MQ0=10;MQRankSum=-7.606;QD=9.57;ReadPosRankSum=0.669;VQSLOD=-0.1363;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:12,3:15:9.53:69,0,10	0/0:8,0:8:19.31:0,19,318	0/0:18,0:9:9.91:0,10,203	0/0:18,0:7:13.86:0,14,195	0/0:20,0:20:39.21:0,39,295	0/0:18,0:18:9.60:0,10,79	0/0:22,0:20:48.85:0,49,364	0/1:18,6:23:13.84:200,0,14	1/1:4,4:8:14.68:164,15,0	0/0:20,0:20:56.83:0,57,851	0/0:11,0:11:27.01:0,27,402	0/0:11,0:11:27.52:0,28,172	0/0:18,0:18:38.37:0,38,312	0/0:13,0:12:26.38:0,26,201	0/0:19,0:18:39.56:0,40,317	0/0:14,0:14:36.11:0,36,594	1/1:8,8:14:30.05:255,30,0	0/1:14,2:16:39.47:100,0,39	1/1:12,4:16:7.05:122,7,0	1/1:8,2:10:17.17:123,17,0	1/1:3,3:6:11.69:89,12,0	0/0:18,0:18:35.62:0,36,265	0/0:16,0:16:22.29:0,22,161	0/0:17,0:17:24.23:0,24,216	0/0:19,0:19:46.13:0,46,319	0/1:9,4:11:81.84:115,0,82	1/1:9,7:16:14.64:221,15,0	1/1:7,3:10:17.75:175,18,0
chr10	110240238	.	TTTC	T	2543.47	PASS	AB=0.975;AC=26;AF=0.464;AN=56;BaseQRankSum=3.407;DP=483;FS=4.612;HRun=0;HaplotypeScore=107.2982;InbreedingCoeff=0.4212;MQ=43.36;MQ0=26;MQRankSum=-10.496;QD=8.39;ReadPosRankSum=-3.778;VQSLOD=1.3529;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,3:21:19.14:216,19,0	0/0:8,0:8:18.53:0,19,348	0/1:16,0:6:9.18:9,0,161	0/0:16,0:5:9.86:0,10,115	0/1:22,0:22:20.86:21,0,74	0/1:22,0:19:15.30:15,0,23	0/0:23,0:20:12:0,12,138	1/1:23,2:24:33.40:280,33,0	1/1:11,0:11:20.88:157,21,0	0/0:20,0:20:44.86:0,45,875	0/0:15,0:15:23.42:0,23,409	0/0:13,0:11:16.05:0,16,68	0/0:18,0:17:12.13:0,12,122	0/0:12,0:11:11.32:0,11,37	0/1:23,0:20:6.71:7,0,124	0/0:16,0:16:36.12:0,36,658	1/1:24,2:22:40.39:369,40,0	0/1:15,3:17:44.81:165,0,45	1/1:16,0:16:33.16:252,33,0	1/1:12,2:13:27.38:293,27,0	1/1:9,1:10:11.90:99,12,0	0/1:15,0:15:0.28:0,0,65	0/0:18,0:16:5.53:0,6,71	0/0:20,0:18:3.48:0,3,83	0/1:18,0:18:10.82:11,0,43	0/1:15,1:13:76.36:220,0,76	1/1:16,3:19:44.90:453,45,0	1/1:11,0:11:20.84:174,21,0
chr10	110240241	.	CTTTCTTTT	C	3707.44	PASS	AB=0.996;AC=32;AF=0.571;AN=56;BaseQRankSum=4.403;DP=483;FS=13.616;HRun=0;HaplotypeScore=134.0392;InbreedingCoeff=0.1713;MQ=40.81;MQ0=28;MQRankSum=-0.574;QD=9.68;ReadPosRankSum=4.394;VQSLOD=1.1441;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:42.33:42,0,72	0/0:8,0:8:17.98:0,18,306	0/0:15,0:5:1.19:0,1,160	0/0:15,0:4:5.37:0,5,39	1/1:18,3:21:41.39:443,41,0	1/1:5,14:19:9.03:191,9,0	1/1:22,1:20:51.12:491,51,0	0/1:23,0:23:95.59:96,0,121	0/1:12,0:12:40.71:41,0,48	0/0:20,0:20:57.13:0,57,1033	0/0:15,0:15:19.96:0,20,643	1/1:13,0:11:25.18:203,25,0	1/1:16,0:16:5.86:222,6,0	0/1:14,0:12:0.31:86,0,0	1/1:20,1:19:17.40:373,17,0	0/0:17,0:16:33:0,33,620	0/1:27,0:23:25.32:86,0,25	0/1:18,0:17:46.22:46,0,134	0/1:16,0:16:34.32:50,0,34	0/1:15,0:14:58.46:71,0,58	0/0:10,0:10:11.14:0,11,57	1/1:13,0:15:26.40:248,26,0	1/1:18,0:16:15.35:156,15,0	1/1:20,0:18:2.45:149,2,0	1/1:15,1:17:44.91:486,45,0	0/1:16,0:14:28.64:29,0,135	0/1:17,0:19:16.46:112,0,16	1/1:9,0:10:2.35:84,2,0
chr10	110240244	.	TC	T	4170.95	PASS	AB=0.973;AC=42;AF=0.750;AN=56;BaseQRankSum=5.569;DP=484;FS=0.000;HRun=1;HaplotypeScore=85.1765;InbreedingCoeff=0.4747;MQ=39.79;MQ0=32;MQRankSum=-4.659;QD=10.05;ReadPosRankSum=-1.961;VQSLOD=0.6046;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,1:21:36.42:200,36,0	0/0:7,0:7:0.43:0,0,90	0/0:12,1:4:2.88:0,3,73	0/0:13,1:3:3.06:0,3,33	1/1:21,1:22:40.53:269,41,0	1/1:21,0:18:8.95:69,9,0	1/1:24,0:21:42.66:335,43,0	1/1:24,0:23:46.28:262,46,0	1/1:13,1:14:19.42:155,19,0	0/0:19,0:19:24.61:0,25,268	0/1:14,0:14:26.17:26,0,84	1/1:16,0:14:32.77:263,33,0	1/1:16,0:15:31.24:266,31,0	1/1:15,0:12:0.95:79,1,0	1/1:22,0:19:24.18:176,24,0	0/0:16,0:15:24.27:0,24,177	1/1:26,1:22:21.53:191,22,0	0/1:19,0:18:15.13:74,0,15	1/1:16,0:16:39.19:239,39,0	1/1:15,0:13:26.90:160,27,0	1/1:11,0:11:13.54:59,14,0	1/1:14,0:14:35.83:267,36,0	1/1:18,0:16:25.10:179,25,0	0/1:18,1:17:10.39:112,0,10	1/1:18,0:18:28.99:313,29,0	0/1:15,1:13:0.70:120,0,1	1/1:20,1:19:41.08:241,41,0	1/1:11,0:11:19.45:116,19,0
chr10	110240342	.	G	GCTT	18400.89	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-8.400;DP=461;FS=9.821;HRun=0;HaplotypeScore=57.3766;InbreedingCoeff=0.9909;MQ=67.52;MQ0=10;MQRankSum=-6.470;QD=48.68;ReadPosRankSum=0.624;VQSLOD=6.0649;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:27:69.24:1472,69,0	0/0:8,0:8:21.07:0,21,331	0/0:18,0:16:43.02:0,43,643	0/0:11,0:9:20.57:0,21,257	1/1:2,27:29:60.16:1237,60,0	1/1:3,19:22:51.18:1092,51,0	1/1:5,13:18:39.13:831,39,0	1/1:2,13:15:41.94:697,42,0	1/1:2,5:7:15.05:307,15,0	0/0:11,0:10:27.09:0,27,428	0/0:23,0:23:63.21:0,63,976	1/1:1,19:20:51.18:1108,51,0	1/1:1,14:15:39.13:841,39,0	1/1:4,5:9:21.07:446,21,0	1/1:1,10:11:21.07:456,21,0	0/0:12,0:12:33.11:0,33,523	1/1:4,29:31:72.25:1564,72,0	1/1:0,18:18:45.15:978,45,0	1/1:2,9:11:30.10:617,30,0	1/1:2,14:15:36.12:757,36,0	1/1:3,9:10:24.08:522,24,0	1/1:0,17:17:39.13:839,39,0	1/1:1,16:17:42.14:892,42,0	1/1:3,16:19:39.13:841,39,0	1/1:1,18:21:45.15:970,45,0	1/1:0,17:17:48.10:920,48,0	1/1:1,9:13:33.09:664,33,0	1/1:3,5:7:18.05:349,18,0
chr10	110241222	.	C	CTTT	13633.16	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.981;DP=621;FS=16.519;HRun=2;HaplotypeScore=116.5407;InbreedingCoeff=0.9990;MQ=74.67;MQ0=0;MQRankSum=-8.341;QD=53.67;ReadPosRankSum=-0.871;VQSLOD=3.5592;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,43:47:99:2486,108,0	0/0:9,0:9:21.07:0,21,340	0/0:17,0:17:48.14:0,48,752	0/0:19,0:19:48.04:0,48,751	0/0:25,0:25:63.22:0,63,1047	0/0:17,0:17:48.15:0,48,773	0/0:15,0:15:42.14:0,42,701	1/1:5,15:20:51.18:1148,51,0	1/1:3,22:26:66.18:1444,66,0	0/0:32,0:31:90.30:0,90,1482	0/0:21,0:21:54.17:0,54,866	0/0:28,0:28:72.23:0,72,1178	0/0:13,0:13:36.12:0,36,602	0/0:18,0:18:45.15:0,45,752	0/0:32,0:32:84.27:0,84,1375	0/0:21,0:21:60.20:0,60,1003	1/1:1,23:25:57.20:1279,57,0	1/1:3,12:18:42.13:909,42,0	1/1:2,11:13:39.13:871,39,0	1/1:5,15:23:60.08:1198,60,0	1/1:3,19:23:60.21:1350,60,0	0/0:19,0:19:48.16:0,48,794	0/0:23,0:23:60.16:0,60,938	0/0:33,0:33:93.32:0,93,1550	0/0:25,0:25:72.25:0,72,1204	1/1:7,20:29:31.07:1621,31,0	1/1:7,11:21:38.63:774,39,0	1/1:0,8:9:24.08:553,24,0
chr10	110241395	.	TG	T	3751.10	PASS	AC=44;AF=0.880;AN=50;BaseQRankSum=2.439;DP=132;FS=0.000;HRun=2;HaplotypeScore=101.9175;InbreedingCoeff=0.4086;MQ=36.24;MQ0=0;MQRankSum=0.733;QD=30.25;ReadPosRankSum=3.319;VQSLOD=3.2522;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:24.07:309,24,0	1/1:0,3:3:9.03:116,9,0	0/0:1,0:1:2.96:0,3,19	0/0:4,0:2:0.89:0,1,2	1/1:1,6:7:12.04:154,12,0	1/1:1,9:10:21.07:271,21,0	1/1:0,4:4:12.04:155,12,0	1/1:1,1:2:3.01:39,3,0	1/1:0,2:2:6.02:77,6,0	1/1:0,4:4:12.04:155,12,0	1/1:0,3:3:6.02:77,6,0	1/1:1,6:7:15.05:193,15,0	./.	1/1:0,3:3:6.02:77,6,0	1/1:0,6:6:18.06:232,18,0	1/1:1,2:3:6.02:77,6,0	1/1:2,5:7:12.04:155,12,0	./.	1/1:0,3:3:9.03:117,9,0	1/1:0,9:9:27.09:348,27,0	0/0:0,2:2:0.23:0,0,1	1/1:0,4:4:12.04:154,12,0	1/1:0,6:6:18.06:231,18,0	1/1:2,6:8:5.21:76,5,0	1/1:0,5:5:15.05:193,15,0	1/1:1,11:12:33.11:427,33,0	1/1:2,3:5:9.03:116,9,0	./.
chr10	110241400	.	TG	T	3678.64	PASS	AC=44;AF=0.917;AN=48;BaseQRankSum=1.980;DP=126;FS=0.000;HRun=2;HaplotypeScore=97.2702;InbreedingCoeff=0.3820;MQ=36.25;MQ0=1;MQRankSum=-0.227;QD=31.99;ReadPosRankSum=2.640;VQSLOD=3.4281;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:12:24.04:310,24,0	1/1:0,3:3:9.03:116,9,0	0/0:2,0:1:3.01:0,3,44	./.	1/1:1,5:6:12.04:154,12,0	1/1:0,9:9:21.07:271,21,0	1/1:0,5:5:12.04:155,12,0	1/1:0,1:1:3.01:39,3,0	1/1:0,2:2:6.02:77,6,0	1/1:1,3:4:9.03:117,9,0	1/1:1,2:3:6.02:77,6,0	1/1:1,5:6:15.05:194,15,0	./.	1/1:1,2:3:6.02:77,6,0	1/1:0,6:6:18.06:232,18,0	1/1:0,2:2:6.02:77,6,0	1/1:1,4:5:12.04:155,12,0	./.	1/1:0,3:3:9.03:117,9,0	1/1:0,9:9:27.09:348,27,0	0/0:2,1:3:1.50:0,2,5	1/1:0,4:4:12.04:155,12,0	1/1:0,6:6:18.06:232,18,0	1/1:0,7:7:4.92:75,5,0	1/1:0,5:5:15.05:194,15,0	1/1:1,10:11:30.10:389,30,0	1/1:0,3:3:9.03:116,9,0	./.
chr10	110241414	.	G	GA	2502.13	PASS	AC=42;AF=0.913;AN=46;BaseQRankSum=2.657;DP=101;FS=14.843;HRun=0;HaplotypeScore=74.9548;InbreedingCoeff=0.2871;MQ=43.17;MQ0=16;MQRankSum=-0.853;QD=31.67;ReadPosRankSum=2.362;VQSLOD=2.3456;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:4:12.04:177,12,0	1/1:0,2:2:6.02:89,6,0	0/0:7,0:2:3.01:0,3,42	0/0:12,0:2:3.01:0,3,38	1/1:0,5:5:6.02:89,6,0	1/1:0,5:5:12.04:178,12,0	1/1:0,3:3:9.03:133,9,0	./.	1/1:0,3:3:6.02:89,6,0	1/1:0,5:4:12.04:172,12,0	1/1:0,1:1:3.01:45,3,0	1/1:0,4:4:12.04:177,12,0	./.	1/1:0,2:2:6.02:89,6,0	1/1:0,4:4:12.04:177,12,0	./.	1/1:0,4:4:9.03:133,9,0	./.	./.	1/1:0,5:5:12.04:178,12,0	1/1:0,3:2:3.01:44,3,0	1/1:0,2:2:6.02:89,6,0	1/1:0,8:8:15.05:223,15,0	1/1:2,4:4:1.82:42,2,0	1/1:0,4:4:9.03:133,9,0	1/1:0,6:6:18.06:261,18,0	1/1:0,2:1:3.01:44,3,0	1/1:0,1:1:3.01:45,3,0
chr10	110241432	.	A	AG	2710.83	PASS	AC=44;AF=0.917;AN=48;BaseQRankSum=1.324;DP=175;FS=15.378;HRun=0;HaplotypeScore=70.3437;InbreedingCoeff=0.2939;MQ=29.69;MQ0=34;MQRankSum=-1.099;QD=20.38;ReadPosRankSum=0.225;VQSLOD=3.6370;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,6:6:12.04:190,12,0	1/1:1,3:4:6.02:94,6,0	0/0:15,0:1:2.80:0,3,13	0/0:18,0:2:3.90:0,4,43	1/1:1,7:8:3.01:36,3,0	1/1:0,2:2:3.01:47,3,0	1/1:1,3:3:3.01:36,3,0	1/1:1,2:2:5.98:68,6,0	1/1:1,4:6:15.05:214,15,0	1/1:2,8:7:21.07:334,21,0	1/1:2,6:8:7.26:85,7,0	1/1:0,4:4:6.02:95,6,0	1/1:0,6:6:9.03:122,9,0	1/1:2,4:6:7.27:86,7,0	1/1:0,9:9:9.03:120,9,0	./.	1/1:0,4:4:6.02:95,6,0	./.	./.	1/1:0,9:9:21.06:262,21,0	./.	1/1:2,7:9:12.04:176,12,0	1/1:3,9:11:11.52:135,12,0	1/1:2,1:1:3.01:48,3,0	1/1:0,3:3:6.02:83,6,0	1/1:0,7:7:21.07:328,21,0	1/1:3,3:5:6.02:73,6,0	1/1:1,2:3:6.02:86,6,0
chr10	110241520	.	C	CAT	3478.60	PASS	AC=38;AF=0.905;AN=42;BaseQRankSum=-1.513;DP=136;FS=9.890;HRun=0;HaplotypeScore=99.1808;InbreedingCoeff=0.2440;MQ=40.19;MQ0=10;MQRankSum=1.365;QD=30.78;ReadPosRankSum=4.213;VQSLOD=5.6431;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:5,3:8:9.21:249,9,0	0/0:7,0:1:3.01:0,3,42	0/0:8,0:1:0:0,0,0	1/1:12,4:16:22.48:445,22,0	1/1:1,4:5:7.77:208,8,0	1/1:0,1:1:3.01:55,3,0	1/1:2,0:2:3.01:45,3,0	./.	1/1:6,3:7:21.07:353,21,0	1/1:7,5:12:19.31:325,19,0	./.	1/1:4,0:4:6.02:108,6,0	1/1:5,0:5:9.03:153,9,0	1/1:2,2:4:9.03:155,9,0	1/1:0,1:1:3.01:55,3,0	1/1:0,2:2:6.02:108,6,0	./.	./.	1/1:5,6:11:8.36:234,8,0	./.	1/1:7,1:8:15.05:244,15,0	1/1:7,0:7:2.23:169,2,0	./.	1/1:2,4:6:15.05:259,15,0	1/1:2,2:4:9.03:154,9,0	1/1:6,0:6:3.01:54,3,0	1/1:1,1:2:6.02:105,6,0
chr10	110241532	.	AAT	A	1161.09	PASS	AC=34;AF=0.895;AN=38;BaseQRankSum=1.647;DP=56;FS=16.721;HRun=0;HaplotypeScore=57.2084;InbreedingCoeff=0.2182;MQ=55.13;MQ0=1;MQRankSum=-1.063;QD=22.77;ReadPosRankSum=1.480;VQSLOD=2.5408;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,2:5:15.03:178,15,0	0/0:1,0:1:3.01:0,3,41	0/0:3,0:1:0.89:0,1,2	1/1:4,4:8:20.02:201,20,0	1/1:4,0:4:12.01:121,12,0	1/1:1,0:1:3:25,3,0	1/1:0,1:1:3.01:44,3,0	./.	1/1:3,0:2:5.21:22,5,0	1/1:5,1:6:14.61:109,15,0	./.	./.	./.	1/1:2,0:2:5.87:40,6,0	1/1:1,0:1:3:25,3,0	1/1:2,0:2:5.72:29,6,0	./.	./.	1/1:6,1:7:17.63:182,18,0	./.	1/1:1,0:1:2.99:24,3,0	1/1:0,1:1:3.01:44,3,0	./.	1/1:4,1:5:14.60:120,15,0	1/1:2,0:2:2.80:13,3,0	1/1:0,1:1:3.01:43,3,0	1/1:1,0:1:3.01:30,3,0
chr10	110241536	.	TTC	T	1781.63	PASS	AC=34;AF=0.895;AN=38;BaseQRankSum=0.985;DP=55;FS=30.523;HRun=0;HaplotypeScore=53.9365;InbreedingCoeff=0.2295;MQ=55.63;MQ0=1;MQRankSum=-2.400;QD=34.93;ReadPosRankSum=1.086;VQSLOD=2.5265;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,3:5:15.02:176,15,0	0/0:1,0:1:3.01:0,3,60	0/0:2,0:1:1.55:0,2,4	1/1:4,4:8:21.73:245,22,0	1/1:0,4:4:12.03:173,12,0	1/1:0,1:1:3.01:48,3,0	1/1:1,0:1:3:28,3,0	./.	1/1:0,3:2:6.02:98,6,0	1/1:1,5:6:15.04:218,15,0	./.	./.	./.	1/1:0,2:2:6.02:89,6,0	1/1:0,1:1:3.01:48,3,0	1/1:0,2:2:6.02:94,6,0	./.	./.	1/1:1,6:7:18.05:235,18,0	./.	1/1:0,1:1:3.01:47,3,0	1/1:1,0:1:3:27,3,0	./.	1/1:1,4:5:15.05:222,15,0	1/1:0,2:2:3.01:49,3,0	1/1:1,0:1:3:29,3,0	1/1:0,1:1:3.01:48,3,0
chr10	110241552	.	AT	A	380.88	PASS	AC=24;AF=0.923;AN=26;BaseQRankSum=1.011;DP=32;FS=13.617;HRun=1;HaplotypeScore=52.7602;InbreedingCoeff=0.1608;MQ=52.53;MQ0=1;MQRankSum=-1.734;QD=13.13;ReadPosRankSum=0.867;VQSLOD=0.9848;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,3:3:5.94:41,6,0	0/0:1,0:1:3.01:0,3,45	./.	1/1:0,4:4:5.84:39,6,0	1/1:0,4:4:8.91:60,9,0	1/1:0,1:1:2.97:20,3,0	./.	./.	1/1:0,2:1:3.01:42,3,0	1/1:0,3:3:8.89:59,9,0	./.	./.	./.	1/1:0,2:2:5.93:40,6,0	1/1:0,1:1:2.97:20,3,0	./.	./.	./.	1/1:0,3:3:3.44:21,3,0	./.	1/1:0,1:1:2.97:20,3,0	./.	./.	1/1:0,2:2:5.93:40,6,0	./.	./.	1/1:0,3:3:8.94:64,9,0
chr10	110242263	.	ATTCACCCT	A	5581.94	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=8.733;DP=244;FS=18.085;HRun=0;HaplotypeScore=63.6769;InbreedingCoeff=0.9178;MQ=77.61;MQ0=0;MQRankSum=-4.639;QD=58.76;ReadPosRankSum=2.632;VQSLOD=2.9436;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:27.09:789,27,0	0/0:2,0:2:6.02:0,6,271	0/0:13,0:11:36.12:0,36,1331	0/0:8,0:8:24.08:0,24,1011	0/0:11,0:11:33.03:0,33,1114	0/0:11,0:11:33.11:0,33,1432	0/0:9,0:9:27.09:0,27,1171	1/1:0,10:10:30.10:769,30,0	1/1:0,11:11:27.09:789,27,0	0/0:9,0:9:27.09:0,27,1199	0/0:10,0:10:30.10:0,30,1230	0/0:11,0:11:33.11:0,33,1380	0/0:9,0:9:27.09:0,27,1117	0/0:4,0:4:9.03:0,9,272	0/0:14,0:14:42.14:0,42,1763	0/0:5,0:5:15.05:0,15,540	1/1:0,7:7:9.03:263,9,0	1/1:0,5:5:6.02:175,6,0	1/1:0,2:2:6.02:128,6,0	1/1:0,10:10:27.09:789,27,0	1/1:0,7:7:9.03:229,9,0	0/0:4,0:4:12.04:0,12,541	0/0:7,0:7:21.03:0,21,832	0/0:12,0:12:33.11:0,33,1364	0/0:10,0:10:30.10:0,30,1259	1/1:0,8:8:20.59:590,21,0	1/1:1,7:8:24.08:653,24,0	1/1:0,9:8:15.05:407,15,0
chr10	110242402	.	CAG	C	8476.26	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.555;DP=573;FS=2.810;HRun=0;HaplotypeScore=80.0480;InbreedingCoeff=0.9991;MQ=86.14;MQ0=1;MQRankSum=-2.138;QD=38.53;ReadPosRankSum=4.026;VQSLOD=7.1963;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:69.24:0,69,1276	0/0:7,0:7:21.07:0,21,391	0/0:21,0:21:63.22:0,63,1137	0/0:22,0:22:63:0,63,1039	1/1:0,19:19:54.18:790,54,0	1/1:2,18:20:54.18:788,54,0	1/1:0,21:21:60.20:878,60,0	0/0:27,0:27:81.23:0,81,1465	0/0:21,0:21:63.21:0,63,1143	0/0:20,0:20:60.21:0,60,1124	0/0:16,0:16:45.15:0,45,838	1/1:0,22:22:63.21:927,63,0	1/1:1,19:20:54.18:785,54,0	1/1:0,13:13:30.10:442,30,0	1/1:0,24:24:66.22:967,66,0	0/0:21,0:21:60.21:0,60,1123	0/0:22,0:22:60.21:0,60,1107	0/0:18,0:18:54.19:0,54,998	0/0:20,0:20:57.20:0,57,1057	0/0:26,0:26:78.22:0,78,1423	0/0:18,0:18:54.18:0,54,973	1/1:0,28:29:75.25:1100,75,0	1/1:1,12:13:30.10:431,30,0	1/1:2,26:27:66.22:972,66,0	1/1:0,11:11:27.09:397,27,0	0/0:26,0:26:75.25:0,75,1371	0/0:25,0:25:72.20:0,72,1306	0/0:15,0:15:45.15:0,45,833
chr10	110242511	.	G	GT	5689.50	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-12.208;DP=587;FS=4.020;HRun=10;HaplotypeScore=67.1647;InbreedingCoeff=0.9352;MQ=74.53;MQ0=0;MQRankSum=1.535;QD=22.67;ReadPosRankSum=-0.149;VQSLOD=5.6525;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:51.13:544,51,0	0/0:9,0:9:20.96:0,21,172	0/0:22,0:21:3.47:0,3,171	0/0:19,0:15:0.26:0,0,150	0/0:27,0:27:62.84:0,63,507	0/0:26,0:26:56.88:0,57,465	0/0:16,0:16:44.90:0,45,365	1/1:9,21:31:62.95:631,63,0	1/1:1,14:15:33.08:351,33,0	0/0:23,0:23:53.91:0,54,441	0/0:22,0:22:56.93:0,57,468	0/0:23,0:23:56.93:0,57,468	0/0:14,1:15:12.91:0,13,306	0/0:13,0:13:35.96:0,36,296	0/0:18,0:18:53.92:0,54,438	0/0:28,0:28:56.73:0,57,610	1/1:3,17:21:45.11:480,45,0	1/1:0,12:12:36.09:384,36,0	1/1:3,20:23:32.40:526,32,0	1/1:2,29:32:65.32:858,65,0	1/1:1,9:10:18.04:190,18,0	0/0:19,0:19:41.92:0,42,342	0/0:18,0:18:47.93:0,48,391	0/0:25,0:26:51.68:0,52,522	0/0:10,0:11:22.95:0,23,172	1/1:4,28:33:83.89:832,84,0	1/1:9,22:31:39.57:606,40,0	1/1:9,11:20:27.07:288,27,0
chr10	110242635	.	TA	T	7883.62	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=3.440;DP=581;FS=7.306;HRun=3;HaplotypeScore=66.1105;InbreedingCoeff=0.9914;MQ=83.19;MQ0=0;MQRankSum=-2.005;QD=33.41;ReadPosRankSum=5.019;VQSLOD=5.1138;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.27:0,81,1161	0/0:4,0:4:9.03:0,9,130	0/0:21,0:21:57.19:0,57,814	0/0:13,0:13:39.13:0,39,561	1/1:0,17:17:45.14:558,45,0	1/1:2,22:24:63.20:781,63,0	1/1:0,23:23:60.19:744,60,0	0/0:29,0:29:81.27:0,81,1151	0/0:15,0:15:42.13:0,42,587	0/0:21,0:21:60.15:0,60,824	0/0:19,0:19:51.16:0,51,718	1/1:0,18:18:51.16:632,51,0	1/1:0,18:18:54.17:669,54,0	1/1:0,20:20:57.18:707,57,0	1/1:0,31:31:84.26:1041,84,0	0/0:18,0:18:54.18:0,54,777	0/0:18,0:18:54.17:0,54,758	0/0:18,0:18:54.16:0,54,757	0/0:27,0:27:72.24:0,72,1037	0/0:24,0:24:57.11:0,57,774	0/0:31,0:31:90.29:0,90,1278	1/1:1,26:27:72.23:892,72,0	1/1:2,14:16:42.13:520,42,0	1/1:0,26:26:69.22:855,69,0	1/1:1,15:16:39.12:483,39,0	0/0:23,0:23:66.22:0,66,951	0/0:26,0:26:78.26:0,78,1122	0/0:8,0:8:24.08:0,24,346
chr10	110243007	.	GGGC	G	9712.18	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=5.519;DP=429;FS=0.608;HRun=0;HaplotypeScore=90.9827;InbreedingCoeff=0.5410;MQ=74.76;MQ0=1;MQRankSum=-4.015;QD=25.63;ReadPosRankSum=7.529;VQSLOD=4.2308;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:51.04:798,51,0	0/0:4,0:4:5.75:0,6,74	0/0:12,0:10:13.68:0,14,139	0/0:14,0:13:12.53:0,13,254	0/1:7,0:7:12.08:42,0,12	1/1:12,0:12:29.64:213,30,0	0/1:13,0:13:12.47:137,0,12	1/1:5,6:11:18.01:272,18,0	1/1:0,24:24:48.16:812,48,0	0/0:8,0:8:15.88:0,16,219	0/0:4,0:4:8.97:0,9,104	0/1:21,0:21:32.18:269,0,32	1/1:20,0:20:3.84:246,4,0	0/1:17,0:17:4.10:227,0,4	0/1:14,0:14:7.65:162,0,8	0/0:8,0:8:24.08:0,24,446	1/1:1,34:35:87.24:1435,87,0	1/1:2,21:23:51.15:836,51,0	1/1:0,11:11:30.01:395,30,0	1/1:0,9:9:24.04:374,24,0	1/1:5,45:50:86.87:1429,87,0	1/1:9,0:9:11.94:90,12,0	1/1:8,0:8:17.89:135,18,0	1/1:17,0:17:31.82:220,32,0	1/1:12,0:12:26.71:200,27,0	1/1:2,14:16:42.04:570,42,0	1/1:0,16:16:36.12:606,36,0	1/1:1,5:6:15.05:244,15,0
chr10	110243010	.	CGGG	C	7939.56	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=2.589;DP=415;FS=1.316;HRun=10;HaplotypeScore=93.7743;InbreedingCoeff=0.8925;MQ=73.39;MQ0=1;MQRankSum=-2.522;QD=21.63;ReadPosRankSum=8.437;VQSLOD=2.2957;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:18.49:360,18,0	0/0:3,0:3:6:0,6,86	0/0:9,0:8:13.74:0,14,190	0/0:13,0:13:23.51:0,24,311	1/1:3,4:7:9.01:123,9,0	1/1:0,11:11:33.04:421,33,0	1/1:2,10:12:23.81:321,24,0	1/1:11,0:11:3.33:138,3,0	1/1:24,0:24:32.82:403,33,0	0/0:8,0:8:20.99:0,21,288	0/0:4,0:4:6.02:0,6,108	1/1:4,16:20:42.13:572,42,0	1/1:1,16:17:36.11:490,36,0	1/1:2,15:17:39.12:531,39,0	1/1:2,11:13:33.11:450,33,0	0/0:8,0:9:27.08:0,27,505	1/1:34,0:34:83.88:702,84,0	1/1:22,0:22:47.91:397,48,0	1/1:11,0:11:15.76:166,16,0	1/1:9,0:9:21:201,21,0	1/1:49,0:49:49.02:704,49,0	1/1:0,8:8:14.98:181,15,0	1/1:0,8:8:18.06:245,18,0	1/1:1,16:17:32.47:449,32,0	1/1:1,10:11:27.09:367,27,0	1/1:16,0:16:26.83:258,27,0	1/1:17,0:17:35.92:336,36,0	1/1:6,0:6:14.92:123,15,0
chr10	110243605	.	CGAT	C	4649.21	PASS	AB=0.520;AC=21;AF=0.375;AN=56;BaseQRankSum=1.983;DP=345;FS=3.252;HRun=0;HaplotypeScore=121.4086;InbreedingCoeff=0.8903;MQ=85.04;MQ0=0;MQRankSum=-6.861;QD=39.40;ReadPosRankSum=0.662;VQSLOD=6.1415;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:36.12:601,36,0	0/0:3,0:3:6.02:0,6,141	0/0:16,0:16:48.11:0,48,966	0/0:21,0:21:63.22:0,63,1353	0/0:13,0:13:30.09:0,30,661	0/0:12,0:12:30.10:0,30,681	0/0:25,0:25:69.24:0,69,1575	1/1:0,11:11:33.11:580,33,0	1/1:0,9:9:18.06:311,18,0	0/0:9,0:9:21.05:0,21,423	0/0:9,0:9:14.98:0,15,354	0/0:20,0:20:57.20:0,57,1325	0/0:15,0:15:24.01:0,24,565	0/0:14,0:14:39.13:0,39,903	0/0:14,0:14:36.12:0,36,839	0/0:14,0:13:36.08:0,36,798	1/1:0,13:13:27.09:475,27,0	1/1:0,7:7:12.04:195,12,0	1/1:1,7:8:21.07:358,21,0	1/1:1,7:8:21.07:355,21,0	1/1:0,21:20:42.14:739,42,0	0/0:12,0:12:33.06:0,33,682	0/0:11,0:11:30.10:0,30,707	0/0:13,0:13:33.11:0,33,759	0/0:6,0:6:18.06:0,18,424	0/1:1,12:13:27.48:561,0,27	1/1:0,5:5:12.04:211,12,0	1/1:1,6:7:15.05:264,15,0
chr10	110243667	.	TC	T	875.41	PASS	AB=0.526;AC=15;AF=0.833;AN=18;DP=185;FS=0.000;HRun=2;HaplotypeScore=90.0943;MQ=34.15;MQ0=0;QD=17.87;VQSLOD=3.5403;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	0/0:0,6:6:0:0,0,0	./.	1/1:1,7:8:21.03:252,21,0	./.	1/1:1,3:4:9.03:117,9,0	./.	0/1:1,9:10:0:0,0,0	./.	./.	./.	./.	1/1:1,5:6:3.01:39,3,0	1/1:0,2:2:6.02:78,6,0	1/1:1,4:4:9.03:117,9,0	./.	./.	./.	./.	./.	./.	1/1:2,7:9:21.07:270,21,0	./.	1/1:0,5:5:6.02:74,6,0
chr10	110244015	.	G	GGTTTGTT	8293.93	PASS	AB=0.927;AC=20;AF=0.357;AN=56;BaseQRankSum=8.092;DP=561;FS=17.810;HRun=0;HaplotypeScore=181.4430;InbreedingCoeff=0.8302;MQ=71.38;MQ0=4;MQRankSum=-11.911;QD=43.20;ReadPosRankSum=-3.667;VQSLOD=2.3418;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:9,2:11:26.92:496,27,0	0/0:4,0:4:12.04:0,12,290	0/0:34,0:23:65.06:0,65,1118	0/0:50,0:32:59.22:0,59,1249	0/0:20,0:20:57.16:0,57,1411	0/0:38,0:38:99:0,108,2847	0/0:26,0:26:78.23:0,78,1833	1/1:31,0:31:89.45:1216,89,0	1/1:11,6:17:51.09:1095,51,0	0/0:25,0:25:72.22:0,72,1728	0/0:9,0:9:27.08:0,27,622	0/0:20,0:20:45.11:0,45,972	0/0:21,0:21:46.69:0,47,1107	0/0:24,0:24:72.18:0,72,1639	0/0:19,0:19:48.10:0,48,930	0/0:25,0:25:75.22:0,75,1776	1/1:12,2:13:33.44:487,33,0	0/1:16,1:15:49.65:591,0,50	1/1:28,1:27:68.88:818,69,0	0/1:9,1:10:53.61:480,0,54	1/1:7,3:9:26.87:362,27,0	0/0:11,0:11:29.98:0,30,561	0/0:10,0:10:30.10:0,30,769	0/0:22,0:22:57.10:0,57,1145	0/0:10,0:10:30.09:0,30,624	1/1:20,6:26:68.08:1335,68,0	1/1:23,1:23:69.07:1339,69,0	1/1:3,0:3:8.99:75,9,0
chr10	110244020	.	G	GTT	3540.93	PASS	AB=0.905;AC=20;AF=0.357;AN=56;BaseQRankSum=13.463;DP=562;FS=7.254;HRun=4;HaplotypeScore=151.0234;InbreedingCoeff=0.8440;MQ=69.40;MQ0=4;MQRankSum=-12.704;QD=19.46;ReadPosRankSum=-0.886;VQSLOD=0.4587;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:19.66:201,20,0	0/0:4,0:4:12.04:0,12,160	0/0:36,0:25:45.41:0,45,557	0/0:51,0:31:27.39:0,27,726	0/0:24,0:24:63.19:0,63,817	0/0:38,0:38:99:0,114,1520	0/0:29,0:29:87.20:0,87,1098	1/1:28,1:30:50.30:566,50,0	1/1:15,1:16:39.14:458,39,0	0/0:26,0:26:72.22:0,72,933	0/0:11,0:11:30.10:0,30,398	0/0:19,0:19:39.11:0,39,496	0/0:21,0:21:27.07:0,27,569	0/0:23,0:23:60.19:0,60,792	0/0:19,0:19:33.10:0,33,438	0/0:26,0:26:72.21:0,72,941	1/1:12,1:12:15.50:174,16,0	0/1:17,1:18:1.08:317,0,1	1/1:23,0:22:30.34:263,30,0	0/1:8,1:9:15.96:236,0,16	1/1:9,0:8:15.44:168,15,0	0/0:11,0:11:27.07:0,27,343	0/0:13,0:13:39.07:0,39,467	0/0:19,0:19:48.14:0,48,610	0/0:10,0:10:27.07:0,27,335	1/1:22,3:25:48.44:570,48,0	1/1:16,5:20:48.20:580,48,0	1/1:2,0:2:2.50:9,2,0
chr10	110244024	.	TG	T	1705.23	PASS	AB=0.793;AC=19;AF=0.339;AN=56;BaseQRankSum=11.780;DP=555;FS=9.015;HRun=1;HaplotypeScore=148.5353;InbreedingCoeff=0.6766;MQ=63.30;MQ0=4;MQRankSum=-11.769;QD=9.37;ReadPosRankSum=0.059;VQSLOD=0.6153;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,4:14:18.83:65,0,19	0/0:4,0:4:12.04:0,12,175	0/0:33,0:22:39.35:0,39,562	0/0:50,0:30:53.34:0,53,813	0/0:23,0:23:69.21:0,69,977	0/0:39,0:39:99:0,117,1689	0/0:30,0:30:90.20:0,90,1230	1/1:15,16:31:68.46:529,68,0	1/1:14,3:17:2.03:120,2,0	0/0:26,0:26:78.24:0,78,1088	0/0:11,0:11:33.08:0,33,458	0/0:18,0:18:39.13:0,39,560	0/0:22,0:22:48.14:0,48,667	0/0:20,0:20:60.20:0,60,867	0/0:16,0:16:39.09:0,39,492	0/0:27,0:27:81.24:0,81,1141	1/1:9,4:12:12.73:135,13,0	0/1:12,6:19:2.65:192,0,3	1/1:18,4:20:29.53:256,30,0	0/1:8,2:10:20.89:120,0,21	1/1:6,3:8:17.79:113,18,0	0/0:12,0:12:30.08:0,30,399	0/0:14,0:14:42.10:0,42,565	0/0:18,0:18:47.79:0,48,609	0/0:10,0:10:30.07:0,30,389	1/1:21,3:24:20.49:195,20,0	1/1:17,4:21:0.55:160,1,0	1/1:1,0:1:2.50:9,2,0
chr10	110244028	.	TTG	T	1759.41	PASS	AB=0.859;AC=17;AF=0.304;AN=56;BaseQRankSum=9.689;DP=545;FS=1.456;HRun=0;HaplotypeScore=157.0153;InbreedingCoeff=0.5463;MQ=60.41;MQ0=4;MQRankSum=-10.881;QD=10.05;ReadPosRankSum=-3.060;VQSLOD=3.1875;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,3:14:21.93:52,0,22	0/0:4,0:4:12.03:0,12,190	0/0:30,0:19:23.84:0,24,550	0/0:47,1:29:43.25:0,43,894	0/0:24,0:24:69.22:0,69,1192	0/0:41,0:41:99:0,120,2104	0/0:29,0:29:68.64:0,69,1376	1/1:14,15:29:57.88:581,58,0	0/1:15,2:17:22.13:96,0,22	0/0:26,0:26:78.26:0,78,1347	0/0:10,0:10:30.09:0,30,505	0/0:18,0:18:39.07:0,39,388	0/0:22,0:22:50.37:0,50,456	0/0:20,0:20:59.18:0,59,676	0/0:16,0:16:34.94:0,35,298	0/0:28,0:28:78.24:0,78,1331	1/1:12,2:13:17.72:197,18,0	1/1:15,5:19:5.12:196,5,0	1/1:17,2:17:24.04:198,24,0	0/1:7,2:9:15.13:132,0,15	1/1:5,3:7:13.95:107,14,0	0/0:15,0:15:37.97:0,38,250	0/0:13,0:13:38.06:0,38,356	0/0:17,0:17:41.53:0,42,393	0/0:9,0:9:21.07:0,21,370	0/1:19,3:22:4.25:109,0,4	0/1:19,3:22:12.93:232,0,13	1/1:0,1:1:3.01:45,3,0
chr10	110244029	.	TG	T	2838.52	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.758;DP=530;FS=10.790;HRun=1;HaplotypeScore=141.2799;InbreedingCoeff=0.9509;MQ=59.57;MQ0=4;MQRankSum=-15.109;QD=17.10;ReadPosRankSum=-0.818;VQSLOD=2.5801;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,8:13:6.80:151,7,0	0/0:4,0:4:12.03:0,12,157	0/0:30,0:19:32.45:0,32,515	0/0:46,0:27:58.49:0,58,775	0/0:23,0:23:69.22:0,69,988	0/0:43,0:43:99:0,126,1715	0/0:28,0:28:70.57:0,71,1130	1/1:23,5:28:76.70:563,77,0	1/1:4,11:15:43.89:318,44,0	0/0:26,0:26:78.18:0,78,1085	0/0:10,0:10:30.08:0,30,419	0/0:18,0:18:31.53:0,32,134	0/0:22,0:22:36.87:0,37,160	0/0:20,0:20:51.65:0,52,308	0/0:16,0:16:21.64:0,22,105	0/0:26,0:26:78.25:0,78,1119	1/1:8,6:13:30.94:256,31,0	1/1:15,5:18:38.49:384,38,0	1/1:10,7:15:33.32:289,33,0	1/1:5,3:8:13.66:142,14,0	1/1:4,4:7:17.24:113,17,0	0/0:16,0:16:38:0,38,177	0/0:13,0:13:33.75:0,34,141	0/0:16,0:16:21.94:0,22,109	0/0:7,0:7:21.07:0,21,306	1/1:8,12:20:53.36:436,53,0	1/1:15,7:21:51.08:377,51,0	1/1:1,0:1:3:29,3,0
chr10	110244034	.	TG	T	5194.34	PASS	AB=0.983;AC=34;AF=0.607;AN=56;BaseQRankSum=10.532;DP=539;FS=15.054;HRun=1;HaplotypeScore=143.0962;InbreedingCoeff=0.7957;MQ=56.94;MQ0=3;MQRankSum=-3.468;QD=16.86;ReadPosRankSum=0.846;VQSLOD=3.7798;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:8.89:51,9,0	0/0:3,0:3:9.03:0,9,123	0/0:27,0:17:37.62:0,38,388	0/0:40,1:24:33.52:0,34,581	0/0:25,0:25:75.13:0,75,957	0/0:40,0:40:99:0,117,1589	0/0:27,0:27:61.92:0,62,976	1/1:31,1:32:36.62:294,37,0	1/1:18,1:19:6.15:81,6,0	0/0:25,0:25:75.21:0,75,976	0/0:9,0:9:27.09:0,27,367	1/1:0,18:18:36.12:502,36,0	1/1:0,21:21:45.15:627,45,0	1/1:10,12:22:64.35:741,64,0	1/1:0,15:15:33.11:459,33,0	0/0:25,0:25:75.21:0,75,970	0/1:19,0:18:4.86:117,0,5	1/1:17,2:18:23.64:175,24,0	1/1:17,1:16:14.95:121,15,0	1/1:8,1:9:18:130,18,0	1/1:9,0:8:6.64:61,7,0	1/1:1,15:16:44.91:516,45,0	1/1:0,12:12:36.12:502,36,0	1/1:1,15:16:39.13:543,39,0	0/0:8,0:8:24.07:0,24,309	1/1:20,0:20:21.10:120,21,0	0/1:27,1:27:26.69:125,0,27	1/1:1,0:1:3:29,3,0
chr10	110244035	.	G	GT	2492.96	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=14.541;DP=540;FS=7.047;HRun=7;HaplotypeScore=153.3111;InbreedingCoeff=0.8917;MQ=56.91;MQ0=3;MQRankSum=-14.586;QD=11.54;ReadPosRankSum=-4.260;VQSLOD=0.4673;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:14:20.65:149,21,0	0/0:3,0:3:9.01:0,9,87	0/1:26,0:16:6.13:6,0,171	0/0:37,0:23:47.97:0,48,432	0/0:25,0:25:72.09:0,72,687	0/0:40,0:40:99:0,117,1123	0/0:27,0:27:55.14:0,55,617	1/1:27,5:32:29.06:362,29,0	1/1:19,1:20:43.63:369,44,0	0/0:25,0:25:66.10:0,66,637	0/0:9,0:9:27.04:0,27,261	0/0:18,0:18:18.66:0,19,48	0/0:21,0:21:13.15:0,13,44	0/0:22,0:22:18.42:0,18,50	0/0:15,0:15:14.95:0,15,38	0/0:25,0:25:63.09:0,63,608	1/1:17,1:18:40.74:351,41,0	1/1:19,1:18:30.71:209,31,0	1/1:18,0:16:23.34:170,23,0	1/1:8,1:9:17.72:143,18,0	1/1:7,1:7:14.74:115,15,0	0/0:16,0:16:18.25:0,18,46	0/0:12,0:12:18.66:0,19,47	0/0:17,0:17:20.21:0,20,52	0/0:8,0:8:24.04:0,24,231	1/1:21,0:21:50.64:356,51,0	1/1:27,1:27:64.33:457,64,0	1/1:1,0:1:2.99:24,3,0
chr10	110244040	.	T	TG	4099.15	PASS	AB=0.755;AC=18;AF=0.321;AN=56;BaseQRankSum=13.809;DP=533;FS=5.818;HRun=0;HaplotypeScore=155.8729;InbreedingCoeff=0.6602;MQ=59.78;MQ0=2;MQRankSum=-14.420;QD=21.57;ReadPosRankSum=-2.272;VQSLOD=3.7573;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,6:14:16.88:282,17,0	0/0:3,0:3:9.03:0,9,126	0/0:23,0:18:35.16:0,35,388	0/0:34,0:23:52.25:0,52,680	0/0:28,0:28:81.24:0,81,1081	0/0:41,0:41:99:0,120,1633	0/0:27,0:27:77.25:0,77,1004	0/1:23,7:30:62.74:436,0,63	1/1:6,14:20:59:660,59,0	0/0:27,0:27:78.24:0,78,1033	0/0:9,0:9:27.09:0,27,377	0/0:17,0:17:36.05:0,36,340	0/0:21,0:21:47.34:0,47,405	0/0:22,0:22:65.96:0,66,577	0/0:14,0:14:16.43:0,16,253	0/0:22,0:22:66.21:0,66,908	1/1:7,12:18:28.85:512,29,0	0/1:13,6:17:18.65:255,0,19	0/1:9,6:14:7.34:202,0,7	0/1:7,4:11:5.72:189,0,6	1/1:3,5:7:17.90:205,18,0	0/0:15,0:15:35.99:0,36,322	0/0:14,0:14:41.99:0,42,374	0/0:17,0:17:48:0,48,428	0/0:9,0:9:27.08:0,27,362	1/1:10,13:23:34.06:591,34,0	1/1:13,14:27:60.14:724,60,0	1/1:2,1:3:2.33:43,2,0
chr10	110244083	.	C	CTA	10422.19	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=8.797;DP=574;FS=2.792;HRun=0;HaplotypeScore=132.9830;InbreedingCoeff=0.9719;MQ=84.20;MQ0=0;MQRankSum=-12.476;QD=51.09;ReadPosRankSum=0.990;VQSLOD=5.2370;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:63.22:1191,63,0	0/0:10,0:10:27.09:0,27,413	0/0:26,0:26:75.24:0,75,1085	0/0:29,0:29:77.17:0,77,1133	0/0:29,0:29:87.30:0,87,1331	0/0:31,0:31:93.30:0,93,1397	0/0:29,0:29:87.30:0,87,1324	1/1:6,16:22:60.20:1116,60,0	1/1:1,18:19:54.18:974,54,0	0/0:26,0:26:78.26:0,78,1186	0/0:18,0:18:51.16:0,51,761	0/0:17,0:17:45.14:0,45,668	0/0:18,0:18:51.16:0,51,760	0/0:19,0:19:54.16:0,54,802	0/0:16,0:16:45.15:0,45,685	0/0:20,0:20:57.19:0,57,873	1/1:2,21:22:57.19:1079,57,0	1/1:1,15:15:42.14:810,42,0	1/1:0,9:10:30.10:578,30,0	1/1:1,18:19:15.55:1000,16,0	1/1:1,15:15:42.14:810,42,0	0/0:19,0:19:57.18:0,57,851	0/0:19,0:19:57.19:0,57,873	0/0:21,0:21:57.19:0,57,873	0/0:23,0:23:69.23:0,69,1056	1/1:2,16:18:5.20:844,5,0	1/1:1,32:33:96.33:1848,96,0	1/1:0,4:4:9.03:174,9,0
chr10	110244414	.	C	CAAACAAACAAACA	18903.91	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-12.601;DP=618;FS=7.636;HRun=0;HaplotypeScore=169.1018;InbreedingCoeff=0.9673;MQ=61.43;MQ0=1;MQRankSum=-11.254;QD=71.34;ReadPosRankSum=1.312;VQSLOD=4.2420;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:31:11.95:1894,12,0	0/0:12,0:12:33.11:0,33,1125	0/0:26,0:18:51.09:0,51,957	0/0:26,0:20:43.67:0,44,1095	0/0:34,0:34:99:0,102,2892	0/0:26,0:26:75.24:0,75,2469	0/0:18,0:18:51.14:0,51,1487	1/1:13,0:36:93.22:2025,93,0	1/1:3,15:21:33.11:2150,33,0	0/0:21,0:21:57.18:0,57,1794	0/0:26,0:26:75.20:0,75,2069	0/0:18,0:18:45.11:0,45,1212	0/0:11,0:11:33.10:0,33,1034	0/0:18,0:18:48.15:0,48,1709	0/0:20,0:20:60.18:0,60,1930	0/0:19,0:19:51.18:0,51,2025	1/1:3,12:26:27.09:1760,27,0	1/1:2,8:18:12.04:622,12,0	1/1:2,10:19:51.17:2129,51,0	1/1:3,13:25:36.05:1416,36,0	1/1:1,6:13:6.02:356,6,0	0/0:18,0:18:51.13:0,51,1411	0/0:17,0:17:51.16:0,51,1628	0/0:15,0:15:45.15:0,45,1669	0/0:28,0:28:78.21:0,78,2286	1/1:0,19:28:72.19:3476,72,0	1/1:2,18:30:39.61:2489,40,0	1/1:0,10:17:9.03:587,9,0
chr10	110244417	.	A	AC	1467.91	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=13.243;DP=555;FS=4.814;HRun=0;HaplotypeScore=97.9954;InbreedingCoeff=0.7585;MQ=63.14;MQ0=1;MQRankSum=-11.835;QD=6.96;ReadPosRankSum=2.387;VQSLOD=3.5191;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:30.37:145,30,0	0/0:12,0:12:36.11:0,36,486	0/0:23,0:17:51.15:0,51,670	0/0:25,0:19:53.48:0,53,661	0/0:34,0:34:99:0,102,1404	0/0:26,0:26:78.26:0,78,1090	0/0:18,0:18:54.16:0,54,722	1/1:29,7:35:38.91:554,39,0	1/1:18,0:18:30.19:135,30,0	0/0:19,0:19:57.19:0,57,793	0/0:25,0:25:75.19:0,75,1011	0/0:16,0:16:48.13:0,48,621	0/0:11,0:11:33.10:0,33,446	0/0:18,0:18:51.15:0,51,683	0/0:20,0:20:60.18:0,60,808	0/0:18,0:18:51.17:0,51,713	1/1:17,0:17:21.96:99,22,0	0/1:12,0:12:10.71:26,0,11	1/1:15,0:15:42.30:209,42,0	0/1:19,0:19:8.66:121,0,9	1/1:8,0:8:5.70:31,6,0	0/0:18,0:18:54.13:0,54,688	0/0:19,0:19:54.17:0,54,723	0/0:15,0:15:45.15:0,45,628	0/0:27,0:27:78.25:0,78,1075	1/1:23,0:23:18.72:183,19,0	1/1:24,0:24:32.96:148,33,0	0/1:17,0:17:22.44:22,0,33
chr10	110244527	.	TA	T	1751.05	PASS	AB=0.799;AC=23;AF=0.411;AN=56;BaseQRankSum=10.390;DP=483;FS=10.952;HRun=14;HaplotypeScore=96.4997;InbreedingCoeff=0.5054;MQ=70.72;MQ0=0;MQRankSum=-3.007;QD=6.51;ReadPosRankSum=4.220;VQSLOD=1.7217;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,10:17:29.73:206,30,0	0/0:8,0:8:18.02:0,18,167	0/1:13,0:13:10.10:10,0,53	0/1:13,0:13:5.19:5,0,20	0/0:9,0:27:61.49:0,61,380	0/0:9,0:18:29.13:0,29,168	0/0:3,0:13:7.04:0,7,37	1/1:11,13:24:10.75:218,11,0	1/1:5,7:12:17.32:122,17,0	0/0:21,0:21:30.03:0,30,276	0/1:20,3:23:12.33:12,0,257	0/0:3,0:12:20.15:0,20,118	0/0:3,0:12:20.04:0,20,110	0/0:4,0:12:14.36:0,14,82	0/0:7,0:17:14.37:0,14,86	0/1:9,2:12:8.32:8,0,193	0/1:8,17:26:3.55:240,0,4	1/1:3,9:13:19.82:129,20,0	1/1:8,8:17:23.24:152,23,0	0/1:9,13:23:48.86:135,0,49	1/1:3,8:11:14.82:103,15,0	0/0:9,0:20:28.68:0,29,158	0/0:6,0:15:17.04:0,17,87	0/0:6,0:16:25.95:0,26,164	0/0:2,0:22:28.49:0,28,146	0/1:11,13:25:10.93:220,0,11	1/1:10,11:21:7.75:195,8,0	1/1:4,13:19:30.78:194,31,0
chr10	110245052	.	CA	C	8018.27	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=10.698;DP=498;FS=12.814;HRun=3;HaplotypeScore=49.0400;InbreedingCoeff=0.9983;MQ=71.87;MQ0=0;MQRankSum=-4.284;QD=35.17;ReadPosRankSum=0.596;VQSLOD=4.1741;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:84.26:1041,84,0	0/0:7,0:7:21.04:0,21,281	0/0:25,0:24:68.71:0,69,902	0/0:15,0:14:39.11:0,39,532	0/0:17,0:17:48.16:0,48,689	0/0:22,0:22:60.20:0,60,864	0/0:13,0:13:39.13:0,39,562	1/1:2,31:33:93.27:1139,93,0	1/1:0,14:14:42.13:521,42,0	0/0:14,0:14:42.14:0,42,605	0/0:14,0:14:42.14:0,42,605	0/0:17,0:17:51.17:0,51,734	0/0:15,0:15:42.14:0,42,604	0/0:18,0:18:54.18:0,54,773	0/0:21,0:21:60.13:0,60,839	0/0:15,0:15:45.15:0,45,648	1/1:0,22:22:66.21:818,66,0	1/1:1,10:11:27.08:335,27,0	1/1:0,21:21:63.20:780,63,0	1/1:0,16:16:42.13:521,42,0	1/1:0,31:31:93.29:1153,93,0	0/0:10,0:10:30.09:0,30,414	0/0:14,0:14:42.14:0,42,605	0/0:25,0:25:75.25:0,75,1079	0/0:8,0:8:24.08:0,24,346	1/1:1,12:13:36.11:446,36,0	1/1:0,29:29:81.25:1004,81,0	1/1:0,7:7:21.07:260,21,0
chr10	110245823	.	CTT	C	4916.10	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=5.134;DP=656;FS=7.504;HRun=10;HaplotypeScore=96.2130;InbreedingCoeff=0.9997;MQ=71.29;MQ0=3;MQRankSum=0.625;QD=28.58;ReadPosRankSum=5.349;VQSLOD=4.7167;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:86.86:0,87,1265	0/0:9,0:10:29.59:0,30,437	0/0:25,0:22:37.82:0,38,492	0/0:24,0:22:53.16:0,53,719	0/0:2,0:31:64.84:0,65,239	0/0:3,0:21:45.41:0,45,169	0/0:3,0:20:34.93:0,35,120	0/0:28,0:29:71.68:0,72,1053	0/0:13,0:13:36.12:0,36,571	0/0:27,0:27:72.25:0,72,1139	0/0:28,0:28:81.28:0,81,1286	1/1:1,22:23:60.15:669,60,0	1/1:1,16:17:48.13:535,48,0	1/1:2,24:26:63.17:702,63,0	1/1:2,31:32:84.23:937,84,0	0/0:16,0:16:45.15:0,45,714	0/0:18,0:19:49.63:0,50,688	0/0:14,0:14:39.13:0,39,619	0/0:23,0:25:65.70:0,66,965	0/0:31,0:32:80.22:0,80,1145	0/0:15,0:15:33.10:0,33,500	1/1:0,25:25:66.17:736,66,0	1/1:1,22:23:63.16:702,63,0	1/1:2,23:25:57.15:635,57,0	0/0:4,0:23:38.68:0,39,132	0/0:31,0:31:84.24:0,84,1295	0/0:27,0:27:78.13:0,78,1131	0/0:16,0:17:50.02:0,50,731
chr10	110245907	.	ATTTTGTAGACTAG	A	14621.41	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.201;DP=507;FS=3.939;HRun=0;HaplotypeScore=209.1347;InbreedingCoeff=0.9979;MQ=63.50;MQ0=0;MQRankSum=-15.653;QD=106.73;ReadPosRankSum=0.372;VQSLOD=4.8609;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,11:14:33.07:1042,33,0	0/0:10,0:10:30.10:0,30,1776	0/0:26,0:23:69.24:0,69,3698	0/0:24,0:17:51.17:0,51,2562	0/0:31,0:31:93.32:0,93,5293	0/0:23,0:23:69.22:0,69,4031	0/0:31,0:31:93.30:0,93,5554	1/1:0,12:12:36.12:1259,36,0	1/1:2,10:12:36.12:1356,36,0	0/0:21,0:21:63.22:0,63,3951	0/0:14,0:14:42.14:0,42,2430	0/0:23,0:23:66.23:0,66,4115	0/0:23,0:23:69.24:0,69,4415	0/0:22,0:22:60.21:0,60,3662	0/0:24,0:24:69.24:0,69,4160	0/0:16,0:16:48.16:0,48,3262	1/1:0,10:10:27.09:1131,27,0	1/1:1,5:6:18.02:648,18,0	1/1:0,9:9:24.08:838,24,0	1/1:2,14:16:48.12:1666,48,0	1/1:0,9:9:27.09:675,27,0	0/0:19,0:19:57.20:0,57,3148	0/0:19,0:19:54.17:0,54,3441	0/0:31,0:31:93.31:0,93,5732	0/0:13,0:13:33.11:0,33,2243	1/1:1,18:19:57.20:2386,57,0	1/1:1,20:21:63.20:2488,63,0	1/1:0,9:9:27.09:1132,27,0
chr10	110245994	.	A	AC	8603.33	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=3.946;DP=669;FS=0.982;HRun=5;HaplotypeScore=92.6787;InbreedingCoeff=0.9984;MQ=62.91;MQ0=1;MQRankSum=-4.478;QD=31.86;ReadPosRankSum=-0.081;VQSLOD=4.8770;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:31:75.24:986,75,0	0/0:8,0:8:18.04:0,18,193	0/0:20,0:20:36.40:0,36,371	0/0:16,0:15:36.08:0,36,380	0/0:27,0:27:69.17:0,69,741	0/0:24,0:24:63.16:0,63,677	0/0:31,0:31:81.19:0,81,862	1/1:1,27:29:69.20:875,69,0	1/1:0,19:19:57.10:711,57,0	0/0:32,0:32:90.20:0,90,952	0/0:28,0:28:75.17:0,75,796	0/0:21,0:21:63.16:0,63,676	0/0:23,0:23:63.14:0,63,669	0/0:21,0:21:51.13:0,51,548	0/0:30,0:30:84.21:0,84,902	0/0:17,0:17:45.11:0,45,483	1/1:1,15:16:42.14:552,42,0	1/1:0,10:10:24.08:316,24,0	1/1:3,21:24:63.19:807,63,0	1/1:7,24:31:63.16:807,63,0	1/1:1,37:37:99:1346,105,0	0/0:21,0:21:54.13:0,54,580	0/0:32,0:32:90.21:0,90,958	0/0:30,0:30:78.20:0,78,837	0/0:18,0:18:51.10:0,51,538	1/1:5,30:35:57.99:1061,58,0	1/1:4,22:26:60.19:788,60,0	1/1:0,11:11:27.09:355,27,0
chr10	110246409	.	TGTG	T	11395.10	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=17.000;DP=628;FS=2.179;HRun=0;HaplotypeScore=111.9226;InbreedingCoeff=0.9974;MQ=79.81;MQ0=0;MQRankSum=-6.537;QD=41.89;ReadPosRankSum=3.104;VQSLOD=6.4179;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,46:46:99:1944,114,0	0/0:10,0:10:24.08:0,24,551	0/0:18,0:18:51.16:0,51,1074	0/0:30,0:28:71.65:0,72,1506	0/0:19,0:19:57.20:0,57,1295	0/0:24,0:24:72.25:0,72,1655	0/0:30,0:30:90.31:0,90,2056	1/1:1,29:30:87.28:1449,87,0	1/1:1,24:25:57.19:972,57,0	0/0:26,0:26:72.25:0,72,1613	0/0:16,0:16:42.14:0,42,915	0/0:20,0:20:57.20:0,57,1293	0/0:29,0:29:81.28:0,81,1830	0/0:21,0:21:63.19:0,63,1364	0/0:23,0:23:69.24:0,69,1572	0/0:12,0:12:36.12:0,36,830	1/1:1,27:28:69.24:1177,69,0	1/1:2,16:18:39.13:664,39,0	1/1:2,12:14:36.12:614,36,0	1/1:0,22:22:44.88:767,45,0	1/1:1,38:39:99:1689,100,0	0/0:15,0:15:45.15:0,45,1008	0/0:21,0:21:63.22:0,63,1447	0/0:21,0:21:63.20:0,63,1400	0/0:20,0:20:57.18:0,57,1241	1/1:3,23:26:45.25:1147,45,0	1/1:1,16:17:42.14:716,42,0	1/1:1,6:7:15.05:256,15,0
chr10	110246546	.	G	GC	8227.67	PASS	AB=0.525;AC=21;AF=0.375;AN=56;BaseQRankSum=-12.287;DP=536;FS=0.348;HRun=2;HaplotypeScore=52.7629;InbreedingCoeff=0.9001;MQ=84.80;MQ0=0;MQRankSum=-3.890;QD=34.86;ReadPosRankSum=2.472;VQSLOD=4.9706;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,49:49:99:1756,123,0	0/0:9,0:9:27.08:0,27,333	0/0:16,0:16:48.06:0,48,548	0/0:20,0:20:53.09:0,53,570	0/0:19,0:19:51.15:0,51,619	0/0:14,0:14:39.12:0,39,483	0/0:22,0:22:66.20:0,66,800	1/1:2,20:22:59.99:825,60,0	1/1:1,17:18:39.13:561,39,0	0/0:23,0:22:69.10:0,69,816	0/0:14,0:14:36.08:0,36,411	0/0:25,0:25:72.09:0,72,842	0/0:27,0:27:78.16:0,78,933	0/0:22,0:22:63.20:0,63,775	0/0:15,0:15:45.14:0,45,557	0/0:12,0:12:33.04:0,33,389	1/1:0,35:35:93.31:1338,93,0	1/1:1,16:17:48.16:691,48,0	1/1:4,13:17:38.86:490,39,0	1/1:0,12:12:30.05:407,30,0	1/1:1,19:20:48.16:690,48,0	0/0:18,0:18:54.16:0,54,658	0/0:9,0:9:27.08:0,27,334	0/0:23,0:23:65.76:0,66,757	0/0:12,0:12:33.09:0,33,395	0/1:2,19:21:14.20:694,0,14	1/1:1,22:23:51.17:733,51,0	1/1:0,2:2:3.01:43,3,0
chr10	110246707	.	C	CTGTG	5279.23	PASS	AB=0.947;AC=41;AF=0.820;AN=50;BaseQRankSum=-0.225;DP=603;FS=1.260;HRun=0;HaplotypeScore=139.7824;InbreedingCoeff=0.5252;MQ=63.26;MQ0=9;MQRankSum=-2.152;QD=10.73;ReadPosRankSum=0.225;VQSLOD=4.2642;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:41:17.35:275,17,0	0/0:6,0:8:6.01:0,6,56	./.	./.	1/1:14,0:14:17.71:209,18,0	1/1:15,0:15:9.03:136,9,0	1/1:18,10:32:9.03:212,9,0	1/1:38,0:37:12.02:157,12,0	1/1:17,0:18:18.05:276,18,0	0/0:15,0:16:1.72:0,2,26	0/0:19,0:18:4.56:0,5,108	1/1:11,6:20:3.48:72,3,0	1/1:12,1:18:3.20:13,3,0	1/1:22,0:22:11.80:212,12,0	1/1:10,6:18:8.86:155,9,0	0/0:14,0:16:9.02:0,9,121	1/1:36,2:40:39.57:670,40,0	1/1:29,0:30:45.59:677,46,0	1/1:16,0:16:12.04:262,12,0	1/1:10,0:11:6.02:120,6,0	1/1:38,1:39:26.81:471,27,0	0/1:17,1:17:34.48:131,0,34	1/1:9,0:13:5.75:60,6,0	1/1:17,9:31:8.77:153,9,0	1/1:7,2:11:11.76:223,12,0	1/1:24,0:23:32.55:479,33,0	1/1:20,0:20:21.05:319,21,0	./.
chr10	110246783	.	G	GT	5656.73	PASS	AB=0.553;AC=21;AF=0.375;AN=56;BaseQRankSum=13.503;DP=482;FS=2.611;HRun=8;HaplotypeScore=81.6278;InbreedingCoeff=0.9186;MQ=90.79;MQ0=2;MQRankSum=-7.151;QD=26.68;ReadPosRankSum=-0.036;VQSLOD=5.2391;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:33:77.95:843,78,0	0/0:6,0:6:18.01:0,18,165	0/0:21,0:22:50.73:0,51,439	0/0:33,0:34:60.58:0,61,571	0/0:15,0:15:42:0,42,379	0/0:13,0:13:39.02:0,39,356	0/0:22,0:22:60.01:0,60,543	1/1:3,25:29:78.17:865,78,0	1/1:2,15:17:51.06:552,51,0	0/0:21,0:21:54.02:0,54,491	0/0:11,0:11:32.93:0,33,282	0/0:12,0:12:36.02:0,36,329	0/0:11,0:10:20.99:0,21,192	0/0:10,0:10:27:0,27,242	0/0:14,0:14:35.97:0,36,317	0/0:15,0:15:39.01:0,39,353	1/1:7,18:25:51.08:558,51,0	1/1:4,18:22:51.15:585,51,0	1/1:4,15:19:45.09:501,45,0	1/1:3,8:11:29.24:294,29,0	1/1:7,7:14:21.02:226,21,0	0/0:13,0:12:36:0,36,322	0/0:9,0:9:23.85:0,24,200	0/0:32,0:32:86.99:0,87,783	0/0:10,0:10:24:0,24,216	0/1:4,17:21:22.27:511,0,22	1/1:2,14:16:48.14:550,48,0	1/1:1,4:5:15.04:172,15,0
chr10	110246846	.	TTGTGA	T	9240.45	PASS	AB=0.777;AC=22;AF=0.393;AN=56;BaseQRankSum=14.233;DP=509;FS=16.435;HRun=0;HaplotypeScore=117.0479;InbreedingCoeff=0.8330;MQ=84.37;MQ0=0;MQRankSum=-11.487;QD=39.49;ReadPosRankSum=0.473;VQSLOD=3.9130;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,27:39:75.11:1369,75,0	0/0:9,0:9:27.09:0,27,835	0/0:16,0:16:39.13:0,39,1074	0/0:22,0:22:5.36:0,5,1258	0/0:18,0:18:45.12:0,45,1307	0/0:15,0:15:42.14:0,42,1298	0/0:23,0:23:60.21:0,60,1829	1/1:2,8:10:24.06:449,24,0	1/1:3,18:21:51.16:1031,51,0	0/0:23,0:23:63.22:0,63,1898	0/0:10,0:10:30.09:0,30,847	0/0:14,0:14:39.13:0,39,1140	0/0:16,0:16:48.16:0,48,1461	0/0:17,0:17:45.14:0,45,1316	0/0:22,0:22:66.23:0,66,1974	0/1:17,1:18:17.79:18,0,1245	1/1:5,16:21:42.10:815,42,0	1/1:5,12:17:33.11:672,33,0	1/1:5,9:14:33.11:669,33,0	1/1:4,10:14:39.13:815,39,0	1/1:8,15:23:33.07:637,33,0	0/0:15,0:15:39.13:0,39,1189	0/0:8,0:8:18.06:0,18,491	0/0:36,0:36:99:0,108,3212	0/0:11,0:11:33.11:0,33,1021	0/1:7,13:20:99:710,0,233	1/1:1,27:28:74.93:1574,75,0	1/1:0,9:9:24.08:483,24,0
chr10	110247207	.	T	TG	9879.03	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=0.449;DP=747;FS=13.480;HRun=2;HaplotypeScore=136.7234;InbreedingCoeff=1.0000;MQ=82.83;MQ0=0;MQRankSum=-12.406;QD=36.59;ReadPosRankSum=-4.365;VQSLOD=1.9004;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,30:41:87.02:1284,87,0	0/0:20,0:20:57.18:0,57,706	0/0:22,0:22:66.14:0,66,773	0/0:26,0:26:72.22:0,72,875	0/0:23,0:23:63.19:0,63,772	0/0:20,0:20:54.17:0,54,670	0/0:37,0:37:99:0,105,1289	1/1:6,25:31:90.08:1179,90,0	1/1:0,24:24:72.24:1035,72,0	0/0:43,0:43:99:0,117,1428	0/0:21,0:21:57.18:0,57,705	0/0:32,0:32:90.27:0,90,1103	0/0:30,0:30:90.27:0,90,1101	0/0:30,0:30:87.27:0,87,1079	0/0:28,0:28:84.26:0,84,1042	0/0:33,0:33:90.28:0,90,1116	1/1:1,24:25:63.18:883,63,0	1/1:2,16:18:51.14:709,51,0	1/1:4,20:24:58.22:861,58,0	1/1:1,13:14:39.13:561,39,0	1/1:1,26:27:65.92:925,66,0	0/0:29,0:29:78.23:0,78,955	0/0:18,0:18:48.15:0,48,591	0/0:42,0:42:99:0,120,1487	0/0:23,0:23:63.20:0,63,781	1/1:7,24:31:44.01:1019,44,0	1/1:0,17:16:48.16:689,48,0	1/1:0,18:18:51.17:733,51,0
chr10	110247229	.	G	GGAAGGGGACATAGTA	39888.14	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=7.888;DP=758;FS=36.761;HRun=0;HaplotypeScore=322.5764;InbreedingCoeff=0.9873;MQ=82.39;MQ0=0;MQRankSum=-18.623;QD=134.76;ReadPosRankSum=-3.655;VQSLOD=3.2187;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,18:43:87.17:5488,87,0	0/0:15,0:15:39.13:0,39,1592	0/0:22,0:22:62.97:0,63,2190	0/0:30,0:31:71.61:0,72,1795	0/0:16,0:16:7.16:0,7,1282	0/0:19,0:19:45.13:0,45,1574	0/0:40,0:39:99:0,108,4250	1/1:42,0:42:99:5838,114,0	1/1:10,13:23:66.21:4256,66,0	0/0:36,0:36:74.78:0,75,2911	0/0:22,0:22:37.67:0,38,1570	0/0:29,0:29:84.27:0,84,3385	0/0:28,0:28:78.22:0,78,2946	0/0:30,0:30:84.28:0,84,3437	0/0:33,0:33:99:0,99,3894	0/0:31,0:31:93.32:0,93,3822	1/1:21,7:28:60.18:3086,60,0	1/1:16,7:23:57.19:3842,57,0	1/1:21,0:21:54.07:2246,54,0	1/1:21,4:25:48.12:2419,48,0	1/1:19,2:21:42.07:1908,42,0	0/0:25,0:25:21.15:0,21,1846	0/0:16,0:16:33.11:0,33,1437	0/0:42,0:42:99:0,114,4691	0/0:27,0:27:48.13:0,48,1849	1/1:23,10:33:87.29:4697,87,0	1/1:17,6:22:60.19:3625,60,0	1/1:6,8:14:36.12:2483,36,0
chr10	110248466	.	ATT	A	4169.12	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=6.143;DP=455;FS=8.571;HRun=9;HaplotypeScore=88.2287;InbreedingCoeff=0.7904;MQ=54.23;MQ0=20;MQRankSum=-7.295;QD=17.97;ReadPosRankSum=0.711;VQSLOD=1.7909;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,11:21:36.48:399,36,0	0/1:8,0:8:8.93:9,0,56	0/0:44,0:9:10.55:0,11,97	0/1:42,0:8:0.31:0,0,98	0/0:20,0:19:23.93:0,24,476	0/0:11,0:11:17.38:0,17,141	0/0:11,0:11:20.93:0,21,243	1/1:11,16:24:48.66:568,49,0	1/1:4,9:13:39.07:414,39,0	0/0:32,0:31:65:0,65,945	0/0:12,0:12:17.52:0,18,255	0/1:6,0:5:6.49:6,0,121	0/0:15,0:15:27.34:0,27,361	0/0:4,0:4:2.97:0,3,20	0/0:12,0:11:23.87:0,24,230	0/0:12,0:12:22.55:0,23,287	1/1:8,7:14:24.06:272,24,0	1/1:10,6:15:32.33:313,32,0	1/1:6,11:17:38.12:408,38,0	1/1:9,12:21:54.10:597,54,0	1/1:3,5:5:15.04:169,15,0	0/0:9,0:9:26.14:0,26,313	0/0:9,0:9:17.73:0,18,189	0/0:9,0:9:15.01:0,15,213	0/0:22,0:23:52.06:0,52,658	1/1:8,11:19:48.11:535,48,0	1/1:5,9:14:33.08:375,33,0	1/1:1,3:3:9.03:104,9,0
chr10	110248471	.	TTTTTC	T	3476.19	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=7.309;DP=531;FS=0.400;HRun=0;HaplotypeScore=129.0476;InbreedingCoeff=0.6995;MQ=45.76;MQ0=38;MQRankSum=-7.546;QD=12.33;ReadPosRankSum=0.391;VQSLOD=2.4122;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,2:25:42.86:420,43,0	0/0:9,0:9:16.64:0,17,132	0/0:41,0:6:11.74:0,12,91	0/1:42,0:8:11.64:12,0,94	0/0:26,0:25:34.70:0,35,342	0/0:11,0:11:2.97:0,3,110	0/0:13,0:13:16.63:0,17,208	1/1:31,0:28:34.93:366,35,0	1/1:12,3:15:43.59:439,44,0	0/0:35,0:34:60.35:0,60,926	0/1:13,0:13:9.39:9,0,219	0/0:10,0:8:16.57:0,17,125	0/0:19,0:19:37.99:0,38,312	0/0:2,0:1:3.01:0,3,31	0/1:17,0:15:6.68:7,0,180	0/0:14,0:14:0.03:0,0,339	1/1:17,0:15:27.64:278,28,0	1/1:19,2:19:32.93:262,33,0	1/1:20,0:18:11.10:182,11,0	1/1:21,1:21:52.15:436,52,0	1/1:11,0:6:14.81:156,15,0	0/0:12,0:12:21.87:0,22,160	0/0:19,0:18:30.25:0,30,226	0/0:9,0:9:23.82:0,24,237	0/0:29,0:29:63.75:0,64,520	1/1:21,0:19:43.67:334,44,0	1/1:18,0:16:43.62:467,44,0	1/1:6,0:3:9.02:110,9,0
chr10	110248474	.	TTC	T	2948.51	PASS	AB=0.969;AC=35;AF=0.625;AN=56;BaseQRankSum=6.282;DP=513;FS=52.374;HRun=0;HaplotypeScore=103.3485;InbreedingCoeff=-0.0373;MQ=43.91;MQ0=38;MQRankSum=-10.328;QD=7.48;ReadPosRankSum=-3.195;VQSLOD=0.7903;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:21:44.99:266,45,0	0/1:9,0:9:25.89:58,0,26	0/0:40,0:5:11.81:0,12,81	0/0:42,0:8:5.51:0,6,74	0/1:26,1:26:99:101,0,186	0/1:12,0:12:12.39:57,0,12	0/1:11,0:11:4.83:5,0,72	1/1:27,0:24:48.36:278,48,0	1/1:15,0:15:43.31:276,43,0	0/0:35,0:34:37.11:0,37,557	0/1:10,0:10:51.61:52,0,90	0/1:8,2:8:39.20:95,0,39	0/1:17,2:19:94.13:94,0,106	0/0:2,0:1:0:0,0,0	0/1:16,0:14:31.04:48,0,31	0/1:14,0:14:69.28:69,0,126	1/1:15,0:13:30.66:191,31,0	1/1:21,0:19:23.32:172,23,0	1/1:20,0:18:16.20:145,16,0	1/1:23,0:22:56.04:311,56,0	1/1:11,0:6:14.55:82,15,0	0/1:12,0:12:37.69:38,0,104	0/1:19,0:18:30.90:136,0,31	0/1:8,1:9:9.62:10,0,83	0/1:27,0:27:90.19:90,0,230	1/1:20,0:18:46.29:232,46,0	1/1:17,0:15:43.13:263,43,0	1/1:6,0:3:8.79:53,9,0
chr10	110248507	.	CT	C	2420.23	PASS	AB=0.619;AC=41;AF=0.788;AN=52;BaseQRankSum=-0.102;DP=432;FS=33.771;HRun=11;HaplotypeScore=89.5485;InbreedingCoeff=0.5795;MQ=34.49;MQ0=39;MQRankSum=-3.478;QD=6.84;ReadPosRankSum=3.859;VQSLOD=0.0030;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,9:20:14.91:123,15,0	0/0:10,0:10:11.97:0,12,106	./.	./.	1/1:10,15:24:14.36:122,14,0	1/1:5,6:11:14.91:117,15,0	1/1:10,2:9:5.66:49,6,0	1/1:11,7:16:20.95:172,21,0	1/1:9,5:11:11.68:98,12,0	0/0:21,0:20:16.56:0,17,152	0/0:13,0:10:6.02:0,6,64	0/1:5,8:10:10.98:127,0,11	1/1:7,4:10:11.21:94,11,0	1/1:2,3:4:2.97:25,3,0	1/1:11,6:15:1.53:104,2,0	0/0:18,1:16:1.66:0,2,170	1/1:17,8:21:20.06:170,20,0	1/1:13,6:15:14.91:123,15,0	1/1:9,5:13:16.17:126,16,0	1/1:6,15:21:28.94:227,29,0	0/0:5,1:5:0.47:0,0,1	1/1:8,5:13:7.50:54,7,0	1/1:10,6:17:9.19:77,9,0	1/1:6,8:10:11.98:98,12,0	1/1:9,12:21:11.88:98,12,0	1/1:10,12:22:29.83:246,30,0	1/1:13,10:22:26.79:218,27,0	1/1:4,5:7:11.94:98,12,0
chr10	110248621	.	G	GACA	11541.66	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-12.626;DP=507;FS=8.771;HRun=0;HaplotypeScore=73.0724;InbreedingCoeff=0.9702;MQ=81.36;MQ0=0;MQRankSum=-5.523;QD=51.76;ReadPosRankSum=2.632;VQSLOD=6.8518;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,38:42:99:2350,105,0	0/0:10,0:10:30.10:0,30,500	0/0:18,0:18:50.96:0,51,806	0/0:16,0:15:42.14:0,42,657	0/0:20,0:20:51.16:0,51,818	0/0:22,0:22:63.20:0,63,1025	0/0:20,0:20:54.18:0,54,894	1/1:3,14:17:45.15:982,45,0	1/1:1,12:14:27.02:518,27,0	0/0:27,0:27:69.24:0,69,1150	0/0:10,0:10:30.08:0,30,450	0/0:18,0:18:48.16:0,48,797	0/0:12,0:12:33.09:0,33,507	0/0:14,0:14:42.14:0,42,699	0/0:17,0:17:36.09:0,36,570	0/0:14,0:14:36.12:0,36,600	1/1:2,27:30:81.28:1834,81,0	1/1:2,13:15:34:750,34,0	1/1:5,8:14:33.06:656,33,0	1/1:2,18:21:4.20:1058,4,0	1/1:6,17:23:42.12:952,42,0	0/0:11,0:11:33.10:0,33,524	0/0:13,0:13:27.08:0,27,425	0/0:21,0:21:63.19:0,63,1018	0/0:21,0:21:63.20:0,63,1025	1/1:2,18:20:51.18:1154,51,0	1/1:3,17:23:48.16:1086,48,0	1/1:1,3:4:9.03:203,9,0
chr10	110249052	.	AG	A	7475.25	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.351;DP=637;FS=7.091;HRun=4;HaplotypeScore=90.9004;InbreedingCoeff=0.9977;MQ=98.96;MQ0=0;MQRankSum=-9.819;QD=33.37;ReadPosRankSum=2.850;VQSLOD=5.2491;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:75.23:898,75,0	0/0:6,0:6:18.06:0,18,252	0/0:34,0:34:93.24:0,93,1239	0/0:36,0:35:93.26:0,93,1240	0/0:18,0:18:51.17:0,51,710	0/0:21,0:21:63.20:0,63,862	0/0:22,0:22:66.22:0,66,924	1/1:4,17:21:51.16:612,51,0	1/1:1,23:24:69.21:827,69,0	0/0:39,0:39:99:0,117,1610	0/0:18,0:18:51.15:0,51,696	0/0:35,0:35:99:0,105,1387	0/0:20,0:20:57.17:0,57,779	0/0:24,0:24:69.22:0,69,949	0/0:35,0:35:99:0,102,1428	0/0:26,0:26:75.24:0,75,1030	1/1:0,14:14:42.13:504,42,0	1/1:0,21:21:60.18:719,60,0	1/1:2,21:23:63.19:755,63,0	1/1:2,12:14:36.11:426,36,0	1/1:1,20:21:60.18:720,60,0	0/0:20,0:20:54.17:0,54,739	0/0:14,0:14:42.13:0,42,569	0/0:22,0:22:60.19:0,60,824	0/0:23,0:23:66.19:0,66,903	1/1:0,27:27:78.24:936,78,0	1/1:3,24:27:72.22:863,72,0	1/1:0,6:6:18.06:216,18,0
chr10	110249112	.	C	CCCACAGGAGTTTTAA	40955.81	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-0.677;DP=666;FS=1.679;HRun=0;HaplotypeScore=280.6385;InbreedingCoeff=0.9954;MQ=85.59;MQ0=0;MQRankSum=-18.183;QD=158.13;ReadPosRankSum=-2.660;VQSLOD=3.9993;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,13:36:99:5716,99,0	0/0:11,0:11:33.11:0,33,1339	0/0:32,0:32:84.24:0,84,3166	0/0:20,0:20:51.17:0,51,1716	0/0:26,0:26:75.26:0,75,3099	0/0:29,0:29:87.30:0,87,3706	0/0:25,0:25:69.22:0,69,2805	1/1:29,1:38:99:5309,105,0	1/1:14,10:24:69.21:4092,69,0	0/0:30,0:30:81.28:0,81,3467	0/0:16,0:16:48.16:0,48,1934	0/0:37,0:37:99:0,108,4572	0/0:15,0:15:45.15:0,45,1788	0/0:21,0:21:60.21:0,60,2677	0/0:31,0:31:90.30:0,90,3889	0/0:26,0:26:78.24:0,78,3156	1/1:11,11:24:63.21:4154,63,0	1/1:6,6:12:30.10:2136,30,0	1/1:18,3:21:63.22:3180,63,0	1/1:12,9:23:60.21:3299,60,0	1/1:11,4:15:33.08:1470,33,0	0/0:20,0:20:57.18:0,57,2261	0/0:17,0:17:45.15:0,45,1892	0/0:27,0:27:75.25:0,75,3198	0/0:24,0:24:66.23:0,66,2592	1/1:23,12:35:99:6093,105,0	1/1:13,12:27:75.26:4869,75,0	1/1:4,0:4:12.04:637,12,0
chr10	110250443	.	CG	C	8991.33	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.341;DP=681;FS=1.632;HRun=5;HaplotypeScore=66.7997;InbreedingCoeff=0.9992;MQ=79.90;MQ0=0;MQRankSum=-2.443;QD=29.87;ReadPosRankSum=2.586;VQSLOD=5.5996;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,46:48:99:1293,114,0	0/0:9,0:9:27.09:0,27,358	0/0:18,0:18:51.12:0,51,634	0/0:17,0:17:42.10:0,42,505	0/0:13,0:13:39.12:0,39,516	0/0:15,0:15:42.11:0,42,541	0/0:33,0:33:96.32:0,96,1312	1/1:5,20:25:57.16:646,57,0	1/1:2,18:20:48.14:544,48,0	0/0:25,0:25:72.23:0,72,959	0/0:15,0:15:45.13:0,45,586	0/0:32,0:32:90.27:0,90,1172	0/0:24,0:24:69.22:0,69,927	0/0:25,0:25:75.23:0,75,1005	0/0:31,0:31:87.29:0,87,1188	0/0:20,0:20:51.17:0,51,697	1/1:2,38:40:99:1190,105,0	1/1:2,19:21:57.16:646,57,0	1/1:1,20:21:60.15:670,60,0	1/1:1,19:20:48.14:544,48,0	1/1:2,54:56:99:1803,159,0	0/0:21,0:21:60.19:0,60,804	0/0:21,0:21:60.18:0,60,802	0/0:37,0:37:99:0,108,1439	0/0:24,0:24:69.18:0,69,881	1/1:1,19:20:57.14:634,57,0	1/1:0,23:23:69.20:782,69,0	1/1:0,7:7:21.06:238,21,0
chr10	110250685	.	T	TG	21142.78	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-12.845;DP=743;FS=7.565;HRun=4;HaplotypeScore=69.6151;InbreedingCoeff=0.9993;MQ=88.24;MQ0=1;MQRankSum=-7.787;QD=35.36;ReadPosRankSum=4.579;VQSLOD=5.0986;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,65:68:99:2544,187,0	0/0:12,0:12:30.06:0,30,328	0/0:29,0:29:81.21:0,81,895	0/0:28,0:28:76.89:0,77,815	1/1:2,0:15:34.50:176,35,0	1/1:0,23:23:63.21:862,63,0	1/1:5,29:34:78.26:1066,78,0	1/1:2,35:37:99:1332,99,0	1/1:1,25:26:63.05:862,63,0	0/0:23,0:23:63.15:0,63,691	0/0:20,0:20:60.17:0,60,680	1/1:2,26:28:75.25:1026,75,0	1/1:2,27:30:78.24:1046,78,0	1/1:0,24:24:66.22:903,66,0	1/1:0,35:35:99:1395,102,0	0/0:32,1:33:58.24:0,58,1047	1/1:1,27:28:78.26:1063,78,0	1/1:1,21:22:60.20:821,60,0	1/1:4,17:21:51.17:691,51,0	1/1:2,20:22:54.18:737,54,0	1/1:1,32:32:90.30:1231,90,0	1/1:0,23:23:63.21:861,63,0	1/1:0,17:17:48.16:657,48,0	1/1:1,31:32:81.27:1108,81,0	1/1:0,12:12:33.11:451,33,0	1/1:1,18:19:23.12:682,23,0	1/1:2,29:31:78.02:1024,78,0	1/1:3,15:18:45.15:607,45,0
chr10	110250904	.	C	CGTACAT	15574.61	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=18.442;DP=755;FS=0.974;HRun=0;HaplotypeScore=193.7355;InbreedingCoeff=0.9485;MQ=68.25;MQ0=0;MQRankSum=-18.208;QD=47.20;ReadPosRankSum=-0.593;VQSLOD=4.8129;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:33,1:42:45.15:1266,45,0	0/0:13,0:13:39.13:0,39,900	0/0:11,0:11:25.60:0,26,276	0/0:17,0:16:26.52:0,27,294	0/0:30,0:30:87.28:0,87,1964	0/0:26,0:26:72.25:0,72,1656	0/0:31,0:31:90.29:0,90,2040	1/1:43,0:43:99:2391,113,0	1/1:34,0:35:69.24:1912,69,0	0/0:29,0:29:84.26:0,84,1937	0/0:22,0:22:66.23:0,66,1552	0/0:39,0:39:99:0,114,2412	0/0:19,0:19:57.19:0,57,1265	0/0:30,0:30:87.27:0,87,1951	0/0:23,0:23:63.16:0,63,1370	0/0:20,0:20:57.12:0,57,1243	1/1:23,0:23:41.94:999,42,0	1/1:25,0:25:39.02:1281,39,0	1/1:28,0:28:80.70:1622,81,0	0/1:28,0:28:2.01:1013,0,2	1/1:27,0:27:21.26:389,21,0	0/0:24,0:24:69.22:0,69,1570	0/0:17,0:17:48.16:0,48,1137	0/0:43,0:44:99:0,123,2873	0/0:30,0:30:81.23:0,81,1755	1/1:36,0:36:23.43:2366,23,0	1/1:36,0:37:17.23:1941,17,0	1/1:6,0:6:15.05:396,15,0
chr10	110250905	.	G	GCACATG	20373.02	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.134;DP=750;FS=2.905;HRun=0;HaplotypeScore=176.8433;InbreedingCoeff=0.9963;MQ=68.85;MQ0=0;MQRankSum=-17.201;QD=62.30;ReadPosRankSum=-3.360;VQSLOD=4.2526;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:40:54.14:1583,54,0	0/0:13,0:13:39.13:0,39,877	0/0:11,0:11:18.13:0,18,295	0/0:17,0:17:26.39:0,26,345	0/0:30,0:30:84.19:0,84,1862	0/0:26,0:26:72.20:0,72,1599	0/0:30,0:30:90.26:0,90,2007	1/1:44,0:44:99:3187,123,0	1/1:35,0:35:78.23:2404,78,0	0/0:29,0:29:84.26:0,84,1892	0/0:22,0:22:66.19:0,66,1503	0/0:39,0:39:99:0,114,2405	0/0:20,0:20:57.12:0,57,1208	0/0:30,0:30:84.27:0,84,1957	0/0:23,0:23:63.16:0,63,1342	0/0:20,0:20:54.12:0,54,1195	1/1:23,0:23:41.94:1224,42,0	1/1:25,0:25:66.10:1738,66,0	1/1:15,5:29:87.25:2206,87,0	1/1:26,0:26:54.09:1393,54,0	1/1:27,0:27:30.31:572,30,0	0/0:24,0:24:69.09:0,69,1501	0/0:17,0:17:48.16:0,48,1131	0/0:42,0:42:99:0,123,2771	0/0:29,0:29:75.26:0,75,1782	1/1:35,0:35:33.31:3010,33,0	1/1:37,0:37:93.16:2554,93,0	1/1:6,0:6:15.05:501,15,0
chr10	110250906	.	C	CACAT	12043.01	PASS	AB=0.861;AC=22;AF=0.393;AN=56;BaseQRankSum=16.601;DP=739;FS=4.491;HRun=0;HaplotypeScore=172.7323;InbreedingCoeff=0.8824;MQ=70.36;MQ0=0;MQRankSum=-18.124;QD=36.83;ReadPosRankSum=-0.739;VQSLOD=4.6298;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,27:38:48.12:921,48,0	0/0:13,0:13:39.13:0,39,768	0/1:12,0:12:3.89:4,0,297	0/0:18,0:18:28.32:0,28,441	0/0:29,0:29:84.19:0,84,1628	0/0:26,0:26:72.20:0,72,1413	0/0:30,0:30:90.28:0,90,1790	1/1:32,12:44:50.59:1825,51,0	1/1:10,25:35:78.22:1526,78,0	0/0:30,0:30:87.30:0,87,1746	0/0:22,0:22:66.19:0,66,1320	0/0:41,0:41:99:0,117,2229	0/0:20,0:20:60.11:0,60,1095	0/0:29,0:29:87.28:0,87,1765	0/0:23,0:23:63.22:0,63,1248	0/0:19,0:19:54.18:0,54,1092	1/1:8,15:23:22.97:716,23,0	1/1:12,13:25:31.60:1097,32,0	1/1:15,7:22:34.60:936,35,0	1/1:18,8:26:44.40:884,44,0	0/1:16,10:26:6.54:306,0,7	0/0:24,0:24:72.12:0,72,1388	0/0:17,0:17:48.16:0,48,997	0/0:44,0:44:99:0,123,2432	0/0:27,0:27:78.22:0,78,1586	1/1:12,24:36:33.70:1923,34,0	1/1:13,21:34:47.14:1580,47,0	1/1:3,3:6:15.05:325,15,0
chr10	110250907	.	G	GCA	5346.43	PASS	AB=0.691;AC=20;AF=0.357;AN=56;BaseQRankSum=19.212;DP=744;FS=0.651;HRun=0;HaplotypeScore=161.4109;InbreedingCoeff=0.8110;MQ=70.80;MQ0=0;MQRankSum=-18.699;QD=16.92;ReadPosRankSum=-2.348;VQSLOD=4.5448;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,27:39:69.54:527,70,0	0/0:13,0:13:39.13:0,39,573	0/0:12,0:12:32.59:0,33,308	0/0:19,0:19:35.66:0,36,391	0/0:29,0:29:81.22:0,81,1145	0/0:26,0:26:69.23:0,69,1013	0/0:29,0:29:87.27:0,87,1255	0/1:31,12:43:35.46:525,0,35	1/1:10,24:35:58.29:717,58,0	0/0:32,0:32:90.25:0,90,1265	0/0:22,0:22:63.21:0,63,925	0/0:41,0:41:99:0,114,1586	0/0:18,0:18:54.10:0,54,748	0/0:31,0:31:87.20:0,87,1229	0/0:23,0:23:66.21:0,66,943	0/0:19,0:19:57.18:0,57,815	1/1:8,15:23:47.45:401,47,0	1/1:14,13:27:20.88:518,21,0	1/1:15,7:22:44.92:457,45,0	1/1:17,8:25:5.60:317,6,0	1/1:16,10:26:6.91:131,7,0	0/0:24,0:24:66.18:0,66,944	0/0:19,0:19:48.13:0,48,682	0/0:43,0:43:99:0,120,1722	0/0:28,0:28:78.25:0,78,1126	0/1:12,24:36:17.78:814,0,18	1/1:13,21:34:74:770,74,0	1/1:3,3:6:15.04:170,15,0
chr10	110251907	.	TGC	T	3727.82	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=4.848;DP=665;FS=12.118;HRun=0;HaplotypeScore=116.4729;InbreedingCoeff=0.9272;MQ=72.49;MQ0=18;MQRankSum=-1.555;QD=14.17;ReadPosRankSum=-0.616;VQSLOD=2.9990;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:35,8:43:97.72:824,98,0	0/0:9,0:9:15.36:0,15,274	0/0:40,0:18:37.02:0,37,325	0/0:40,0:21:55.45:0,55,426	0/0:15,0:15:34.60:0,35,336	0/0:25,0:24:62.73:0,63,654	0/0:32,0:32:72.44:0,72,829	1/1:2,25:26:71.66:589,72,0	1/1:1,17:17:14.70:139,15,0	0/0:32,0:32:48.57:0,49,805	0/0:11,0:11:28.16:0,28,292	0/0:28,0:28:64.90:0,65,554	0/0:29,0:29:57.56:0,58,436	0/0:13,0:13:22.48:0,22,176	0/0:28,0:28:62.34:0,62,521	0/0:30,0:29:56.91:0,57,813	1/1:21,10:31:62.90:559,63,0	1/1:1,25:26:17.64:195,18,0	1/1:15,3:18:50.97:501,51,0	1/1:3,14:17:8.66:63,9,0	1/1:3,34:37:3.01:41,3,0	0/0:12,0:12:20.64:0,21,148	0/0:9,0:9:17.77:0,18,120	0/0:36,0:36:72.15:0,72,646	0/0:13,0:13:27.35:0,27,314	1/1:1,24:25:71.79:675,72,0	1/1:1,19:20:11.98:117,12,0	1/1:1,0:1:3:25,3,0
chr10	110251910	.	G	GCACA	1465.38	PASS	AB=0.981;AC=20;AF=0.400;AN=50;BaseQRankSum=-4.016;DP=690;FS=2.122;HRun=0;HaplotypeScore=157.3401;InbreedingCoeff=0.2156;MQ=69.98;MQ0=19;MQRankSum=1.501;QD=3.96;ReadPosRankSum=0.853;VQSLOD=2.8431;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:42:5.67:16,0,6	0/0:7,0:8:15.03:0,15,193	./.	./.	0/1:18,0:18:68.92:69,0,81	0/1:28,0:28:79.33:120,0,79	0/1:35,0:34:99:123,0,103	0/0:28,0:27:2.14:0,2,16	0/0:18,0:17:11.77:0,12,86	0/0:28,0:31:13.15:0,13,313	0/0:11,0:11:6:0,6,72	1/1:19,1:29:20.96:183,21,0	1/1:17,13:34:16.71:230,17,0	1/1:12,5:18:3.08:71,3,0	0/1:28,2:31:7.12:116,0,7	0/1:26,0:31:3.58:4,0,380	0/0:30,0:30:23.76:0,24,186	0/1:27,0:27:23.42:23,0,97	0/0:17,0:17:10.98:0,11,70	0/0:15,0:15:0.47:0,0,1	0/0:38,0:38:2.04:0,2,6	1/1:12,0:12:8.99:103,9,0	1/1:11,0:11:5.89:66,6,0	1/1:32,3:37:32.89:451,33,0	0/1:15,0:15:52.02:52,0,80	0/0:24,0:24:14.29:0,14,113	0/0:21,0:21:6:0,6,55	./.
chr10	110251944	.	ACACACACGCACG	A	8846.41	PASS	AB=0.986;AC=22;AF=0.393;AN=56;BaseQRankSum=-4.058;DP=714;FS=1.159;HRun=0;HaplotypeScore=241.0728;InbreedingCoeff=0.5500;MQ=54.87;MQ0=18;MQRankSum=-2.903;QD=23.47;ReadPosRankSum=-5.582;VQSLOD=2.8343;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:36:20.20:907,0,20	0/0:10,0:10:24.08:0,24,952	0/0:22,0:6:15.03:0,15,233	0/1:42,0:11:4.83:5,0,352	0/0:16,0:16:24.85:0,25,753	0/0:25,0:24:33.04:0,33,1376	0/0:37,0:36:46.73:0,47,1785	1/1:26,0:24:52.52:828,53,0	0/1:17,1:18:10.78:577,0,11	0/0:33,0:32:62.61:0,63,2236	0/0:10,0:10:18.04:0,18,380	0/0:26,0:26:6.33:0,6,975	0/0:29,0:29:13.04:0,13,904	0/1:26,0:26:6.55:7,0,272	0/0:31,0:31:22.61:0,23,1019	0/0:24,0:23:44.74:0,45,1814	1/1:32,4:36:75.05:1632,75,0	0/1:30,1:31:19.11:777,0,19	1/1:21,0:21:54.13:766,54,0	1/1:13,0:13:21.54:437,22,0	1/1:55,0:55:81.67:1205,82,0	0/0:18,0:18:15.39:0,15,466	0/1:16,0:16:17.93:18,0,507	0/0:37,0:37:43.29:0,43,1670	0/0:19,0:19:34.60:0,35,1083	1/1:26,0:26:51.61:905,52,0	1/1:29,0:29:35.20:692,35,0	1/1:2,0:2:6.02:93,6,0
chr10	110251946	.	ACACACGCACG	A	8488.32	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=-4.347;DP=698;FS=0.773;HRun=0;HaplotypeScore=222.6166;InbreedingCoeff=0.6830;MQ=55.08;MQ0=16;MQRankSum=-3.123;QD=22.28;ReadPosRankSum=-5.523;VQSLOD=2.7174;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,5:36:19.90:928,20,0	0/0:10,0:10:24.08:0,24,772	0/0:21,0:6:14.58:0,15,232	0/1:39,0:11:9.69:10,0,351	0/1:16,0:16:2.18:2,0,486	0/0:27,0:26:20.86:0,21,994	0/0:36,0:35:35.58:0,36,1212	1/1:24,0:22:54.05:834,54,0	1/1:15,3:18:27.56:597,28,0	0/0:33,0:32:62.61:0,63,1750	0/0:9,0:9:12.04:0,12,284	0/0:26,0:26:2.26:0,2,704	0/0:28,0:28:12.99:0,13,702	0/1:26,0:26:6.99:7,0,162	0/0:29,0:29:23.70:0,24,747	0/0:26,0:25:45.15:0,45,1521	1/1:29,6:35:81.23:1509,81,0	1/1:28,2:30:4.44:707,4,0	1/1:22,0:22:51.60:730,52,0	1/1:9,4:13:21.07:369,21,0	1/1:52,0:52:82.05:1299,82,0	0/0:17,0:17:13.56:0,14,302	0/1:16,0:16:17.66:18,0,398	0/0:35,0:35:34.30:0,34,1236	0/0:20,0:20:27.46:0,27,743	1/1:23,3:26:50.16:736,50,0	1/1:24,2:26:44.29:650,44,0	1/1:2,0:2:6.02:93,6,0
chr10	110251950	.	ACGCACG	A	8328.63	PASS	AB=0.973;AC=32;AF=0.571;AN=56;BaseQRankSum=-4.856;DP=671;FS=10.883;HRun=0;HaplotypeScore=181.0810;InbreedingCoeff=0.2188;MQ=61.72;MQ0=12;MQRankSum=-1.448;QD=16.27;ReadPosRankSum=-2.711;VQSLOD=3.2805;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:58.45:930,58,0	0/0:8,0:8:24.08:0,24,557	0/0:25,0:13:36.05:0,36,550	0/0:35,0:12:0.92:0,1,381	0/1:15,0:16:87.86:88,0,207	0/1:25,0:24:53.52:54,0,432	0/1:32,0:34:58.08:58,0,432	1/1:5,18:22:59.36:880,59,0	1/1:16,0:16:30.10:504,30,0	0/0:33,0:33:59.63:0,60,1562	0/0:9,0:9:18.04:0,18,304	0/1:26,0:26:6.32:6,0,218	0/0:26,0:26:6.04:0,6,314	0/1:24,0:25:13.03:13,0,57	0/1:27,0:27:21.72:22,0,251	0/0:22,0:21:46.64:0,47,1090	1/1:36,0:36:87.12:1370,87,0	1/1:29,0:29:11.32:654,11,0	1/1:20,0:20:30.10:609,30,0	1/1:13,0:13:20.79:275,21,0	1/1:49,0:49:82:1345,82,0	0/1:17,0:18:45.43:45,0,68	0/1:15,0:15:23.46:23,0,172	0/1:34,0:34:36.54:37,0,512	0/1:22,0:23:63.96:64,0,249	1/1:23,0:23:42.37:675,42,0	1/1:23,0:23:41.72:583,42,0	1/1:2,0:2:6.02:93,6,0
chr10	110253443	.	TTC	T	1720.55	PASS	AB=0.844;AC=26;AF=0.520;AN=50;BaseQRankSum=3.607;DP=517;FS=0.814;HRun=0;HaplotypeScore=95.2501;InbreedingCoeff=0.4900;MQ=64.79;MQ0=10;MQRankSum=-0.499;QD=5.81;ReadPosRankSum=-0.291;VQSLOD=2.5366;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:12.42:12,0,21	0/0:9,0:9:9.03:0,9,133	1/1:20,0:13:1.55:4,2,0	./.	1/1:18,0:19:28.87:288,29,0	1/1:20,0:20:20.89:208,21,0	1/1:25,0:22:18.05:194,18,0	0/0:31,0:27:8.72:0,9,50	0/0:16,0:15:0:0,0,0	0/0:18,0:18:11.99:0,12,135	0/1:10,2:12:47.36:47,0,144	1/1:14,9:22:11.50:129,11,0	0/0:13,0:14:13.34:0,13,134	1/1:7,5:14:30.62:249,31,0	1/1:13,2:13:6.48:63,6,0	1/1:5,10:15:15.03:164,15,0	0/0:19,0:19:5.83:0,6,44	0/0:14,0:13:0.47:0,0,1	0/0:15,0:14:5.99:0,6,48	./.	./.	1/1:15,2:17:15.87:144,16,0	0/1:11,4:15:4.79:127,0,5	1/1:17,8:23:23.82:197,24,0	0/1:15,0:22:8.25:8,0,63	0/0:21,0:21:6.74:0,7,44	1/1:26,0:26:10.91:50,11,0	0/0:17,0:15:0:0,0,0
chr10	110253479	.	CTCTCTCTTTCTCTCTTTCTCTCTT	C	3028.84	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-5.646;DP=440;FS=5.052;HRun=0;HaplotypeScore=241.2561;InbreedingCoeff=0.8561;MQ=58.18;MQ0=15;MQRankSum=0.278;QD=19.67;ReadPosRankSum=-3.698;VQSLOD=1.8949;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:22:26.48:399,26,0	0/0:7,0:7:21:0,21,1184	0/0:5,0:2:6.02:0,6,132	0/0:13,0:10:3.80:0,4,119	0/0:19,0:19:31.23:0,31,493	0/0:18,0:18:34.47:0,34,562	0/0:16,0:14:27.60:0,28,560	1/1:10,0:9:13.77:192,14,0	1/1:12,0:11:15.02:249,15,0	0/0:20,0:20:54.18:0,54,3179	0/0:20,0:20:48.14:0,48,2700	0/0:16,0:15:22.84:0,23,774	0/0:16,0:16:15.05:0,15,745	0/0:18,0:18:45.62:0,46,1388	0/0:17,0:15:6.49:0,6,331	0/0:20,0:20:36.07:0,36,2382	1/1:20,0:19:14.85:232,15,0	1/1:12,0:11:24.35:317,24,0	1/1:7,0:7:15.03:267,15,0	1/1:13,0:13:3.83:20,4,0	1/1:7,0:6:3.90:77,4,0	0/0:13,0:13:6.95:0,7,436	0/0:15,0:14:18:0,18,697	0/0:31,0:29:37.53:0,38,983	0/0:22,0:22:35.80:0,36,1171	1/1:19,0:18:43.04:707,43,0	1/1:1,21:22:11.88:748,12,0	1/1:7,0:5:5.23:28,5,0
chr10	110253485	.	CTT	C	3467.87	PASS	AB=1.000;AC=41;AF=0.759;AN=54;BaseQRankSum=5.475;DP=439;FS=0.000;HRun=3;HaplotypeScore=110.9544;InbreedingCoeff=0.6075;MQ=58.18;MQ0=17;MQRankSum=1.258;QD=9.71;ReadPosRankSum=0.180;VQSLOD=0.1513;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:21:26.50:207,26,0	0/0:8,0:8:21.63:0,22,227	0/0:8,0:4:9.02:0,9,92	0/0:16,0:13:11.03:0,11,92	1/1:21,0:21:26.92:164,27,0	1/1:18,0:18:42.07:299,42,0	1/1:18,0:16:36.07:238,36,0	1/1:8,0:7:15.54:97,16,0	1/1:11,0:10:20.80:157,21,0	0/0:20,0:20:59.04:0,59,526	0/0:19,0:19:25.11:0,25,401	1/1:21,1:21:44.16:307,44,0	0/1:16,0:16:5.91:6,0,43	1/1:18,0:18:22.61:230,23,0	1/1:4,12:14:5.21:64,5,0	0/1:20,0:20:54.32:54,0,154	1/1:15,0:14:18.11:130,18,0	1/1:11,0:10:26.27:181,26,0	1/1:0,6:6:14.96:124,15,0	./.	1/1:8,0:7:2.82:24,3,0	1/1:12,0:12:16.80:112,17,0	1/1:13,0:12:16.41:95,16,0	1/1:31,0:29:46.43:337,46,0	0/1:20,0:20:69.56:224,0,70	1/1:4,17:20:21.12:314,21,0	1/1:22,0:22:12.60:79,13,0	1/1:7,0:5:2.99:23,3,0
chr10	110253508	.	TCTCTCTCA	T	8016.93	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=2.243;DP=439;FS=3.046;HRun=0;HaplotypeScore=138.4294;InbreedingCoeff=0.9697;MQ=68.48;MQ0=8;MQRankSum=-1.611;QD=40.90;ReadPosRankSum=2.160;VQSLOD=4.7586;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:9:15:0,15,153	0/0:6,0:6:15.05:0,15,411	0/0:23,0:15:32.81:0,33,739	0/0:36,0:29:57.45:0,57,776	1/1:0,18:18:48.09:670,48,0	1/1:12,0:12:36.12:809,36,0	1/1:16,0:16:48.16:914,48,0	0/0:17,0:16:48.06:0,48,740	0/0:9,0:9:26.93:0,27,315	0/0:22,0:22:63.17:0,63,1671	0/0:20,0:20:54.18:0,54,1502	1/1:16,3:19:51.16:1178,51,0	1/1:0,17:17:9.03:257,9,0	1/1:11,2:13:33.11:711,33,0	1/1:12,0:12:15.04:241,15,0	0/0:25,0:25:54.19:0,54,1428	0/0:14,0:13:32.15:0,32,344	0/0:8,0:8:18.02:0,18,218	0/0:8,0:7:21.02:0,21,263	0/0:12,0:12:30.03:0,30,428	0/0:11,0:11:20.98:0,21,235	1/1:0,9:9:21.07:301,21,0	1/1:0,9:9:15.05:344,15,0	1/1:27,1:27:49.91:1179,50,0	1/1:15,7:22:63.17:1355,63,0	0/0:16,0:15:42.03:0,42,534	1/1:21,0:21:9.18:59,9,0	0/0:6,0:6:15.05:0,15,223
chr10	110254268	.	G	GAGGGGAGCT	24479.81	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-6.501;DP=674;FS=6.645;HRun=0;HaplotypeScore=167.9936;InbreedingCoeff=0.9926;MQ=85.62;MQ0=0;MQRankSum=-16.963;QD=92.03;ReadPosRankSum=-0.301;VQSLOD=4.6820;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,22:42:78.18:3378,78,0	0/0:5,0:5:12.04:0,12,368	0/0:28,0:28:78.27:0,78,2058	0/0:23,0:23:58.94:0,59,1319	0/0:22,0:22:63.20:0,63,1748	0/0:21,0:21:63.22:0,63,1762	0/0:26,0:26:78.25:0,78,1951	1/1:19,8:36:99:3646,102,0	1/1:3,15:19:51.18:2318,51,0	0/0:35,0:35:99:0,99,2889	0/0:16,0:16:45.15:0,45,1379	0/0:31,0:31:93.31:0,93,2690	0/0:26,0:26:75.25:0,75,2186	0/0:32,0:32:93.32:0,93,2651	0/0:32,0:32:96.30:0,96,2780	0/0:30,0:30:90.31:0,90,2646	1/1:5,14:24:45.15:2115,45,0	1/1:4,4:9:21.07:973,21,0	1/1:8,11:22:52.03:2042,52,0	1/1:9,14:25:48.12:2129,48,0	1/1:14,11:29:33.11:1496,33,0	0/0:25,0:25:72.23:0,72,2033	0/0:10,0:10:30.10:0,30,831	0/0:28,0:28:72.25:0,72,2112	0/0:18,0:18:54.16:0,54,1504	1/1:5,12:19:57.18:2233,57,0	1/1:8,17:35:74.98:3488,75,0	1/1:1,4:6:15.05:661,15,0
chr10	110255080	.	AAG	A	3658.86	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.238;DP=415;FS=5.769;HRun=0;HaplotypeScore=53.4011;InbreedingCoeff=0.9813;MQ=86.50;MQ0=1;MQRankSum=-1.209;QD=38.11;ReadPosRankSum=3.408;VQSLOD=5.4174;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,2100	0/0:5,0:5:15.05:0,15,263	0/0:16,0:16:45.15:0,45,749	0/0:19,0:18:33.09:0,33,543	0/0:15,0:15:45.15:0,45,820	0/0:16,0:16:48.11:0,48,839	0/0:9,0:9:27.09:0,27,483	0/0:17,0:17:42.14:0,42,755	0/0:17,0:17:42.13:0,42,723	0/0:15,0:15:42.08:0,42,702	0/0:10,0:10:27.07:0,27,423	1/1:1,19:20:51.17:730,51,0	1/1:0,16:16:45.15:644,45,0	1/1:2,5:7:18.06:258,18,0	1/1:0,13:13:36.12:516,36,0	0/0:12,0:12:36.10:0,36,624	0/0:25,0:25:75.24:0,75,1321	0/0:14,0:14:42.12:0,42,727	0/0:14,0:14:42.13:0,42,708	0/0:11,0:11:30.10:0,30,547	0/0:20,0:20:60.19:0,60,1054	1/1:0,15:15:45.11:614,45,0	1/1:2,10:12:24.08:339,24,0	1/1:0,13:13:39.13:559,39,0	0/0:17,0:17:51.15:0,51,871	0/0:7,0:7:15.04:0,15,244	0/0:15,0:14:42.14:0,42,766	0/0:3,0:3:9.03:0,9,144
chr10	110255445	.	TTC	T	13415.65	PASS	AB=0.775;AC=44;AF=0.786;AN=56;BaseQRankSum=6.661;DP=654;FS=4.074;HRun=0;HaplotypeScore=86.6809;InbreedingCoeff=0.7759;MQ=73.60;MQ0=3;MQRankSum=-2.294;QD=24.71;ReadPosRankSum=4.013;VQSLOD=5.8052;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,37:43:90.12:1112,90,0	0/0:5,0:5:12.04:0,12,200	0/0:28,0:18:16.59:0,17,375	0/0:36,1:23:36.12:0,36,556	1/1:5,16:21:42.13:529,42,0	1/1:3,13:16:30.10:379,30,0	1/1:4,26:30:66.21:833,66,0	1/1:9,31:40:93.27:1145,93,0	1/1:2,20:23:47.98:582,48,0	0/1:26,4:30:66.83:67,0,1109	0/0:12,0:12:30.07:0,30,434	1/1:4,26:30:66.21:833,66,0	1/1:1,21:22:51.16:643,51,0	1/1:4,17:21:51.16:643,51,0	1/1:9,28:37:75.24:938,75,0	0/0:26,1:27:35.25:0,35,1085	1/1:5,23:28:54.17:681,54,0	1/1:0,9:9:24.08:303,24,0	1/1:6,12:18:36.10:440,36,0	1/1:3,13:16:36.03:418,36,0	1/1:12,34:47:81.09:998,81,0	1/1:0,12:11:27.09:341,27,0	1/1:1,7:8:18.06:227,18,0	1/1:2,20:22:42.13:530,42,0	1/1:2,16:18:33.11:416,33,0	1/1:0,19:19:57.15:692,57,0	1/1:3,16:19:42.13:530,42,0	0/1:7,7:14:63.48:133,0,63
chr10	110256500	.	GGGGGAAGGGAGTATGAGGGAGGAA	G	7605.05	PASS	AB=0.657;AC=21;AF=0.375;AN=56;BaseQRankSum=12.057;DP=486;FS=9.575;HRun=0;HaplotypeScore=289.6281;InbreedingCoeff=0.7764;MQ=65.33;MQ0=1;MQRankSum=-8.810;QD=48.75;ReadPosRankSum=-0.460;VQSLOD=2.0240;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,18:23:12.04:707,12,0	0/0:7,0:7:21.07:0,21,1994	0/0:17,0:17:45.15:0,45,2828	0/0:22,0:19:44.28:0,44,2689	0/0:26,0:26:72.20:0,72,6466	0/0:17,0:17:48.15:0,48,3792	0/0:33,0:33:96.33:0,96,8106	1/1:3,22:25:60.15:1162,60,0	1/1:7,8:15:15.05:972,15,0	0/0:18,0:18:51.18:0,51,4621	0/0:11,0:11:30.10:0,30,2262	0/0:16,0:16:47.19:0,47,3532	0/0:15,0:15:42.14:0,42,4122	0/0:16,0:16:45.15:0,45,4800	0/0:27,0:27:78.27:0,78,8104	0/0:24,0:24:63.22:0,63,5988	1/1:2,7:9:6.02:389,6,0	1/1:2,4:6:3.01:195,3,0	1/1:3,3:6:9.03:440,9,0	1/1:6,5:11:3.01:195,3,0	1/1:8,8:16:1.55:192,2,0	0/0:22,0:22:66.23:0,66,6190	0/0:15,0:15:39.13:0,39,3037	0/0:17,0:17:48.16:0,48,4308	0/0:27,0:27:72.25:0,72,7429	0/1:11,12:22:99:824,0,757	1/1:8,13:21:36.12:2335,36,0	1/1:0,1:1:3.01:195,3,0
chr10	110256584	.	AACTGACACAC	A	3610.55	PASS	AB=0.972;AC=22;AF=0.393;AN=56;BaseQRankSum=7.817;DP=429;FS=4.959;HRun=0;HaplotypeScore=146.4800;InbreedingCoeff=0.6939;MQ=75.16;MQ0=10;MQRankSum=-7.146;QD=24.23;ReadPosRankSum=2.851;VQSLOD=2.9973;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,2:17:12:240,12,0	0/0:10,0:10:20.94:0,21,560	0/0:71,0:37:48.91:0,49,913	0/0:63,0:29:38.37:0,38,583	0/1:14,0:14:27.53:28,0,35	0/1:9,0:9:66.79:67,0,176	0/0:14,0:14:33.08:0,33,507	1/1:22,0:20:45.15:597,45,0	1/1:10,2:12:9.03:239,9,0	0/0:17,0:17:45.15:0,45,1021	0/0:11,0:11:27.09:0,27,603	0/0:11,0:11:27.08:0,27,473	0/0:6,0:5:15.05:0,15,374	0/0:9,0:9:18.06:0,18,472	0/0:9,0:10:10.16:0,10,236	0/0:10,0:10:30.10:0,30,946	1/1:5,1:6:12.04:247,12,0	1/1:6,2:8:18.06:435,18,0	1/1:1,5:6:15.05:326,15,0	1/1:9,5:14:12.04:343,12,0	0/1:7,0:7:0:0,0,0	0/0:13,0:13:27.08:0,27,597	0/0:5,0:5:12.04:0,12,201	0/0:11,0:10:18.06:0,18,406	0/0:17,0:17:27.09:0,27,433	0/1:14,2:16:14.98:502,0,15	1/1:8,2:12:21.07:448,21,0	1/1:1,4:5:6.02:139,6,0
chr10	110256586	.	CTG	C	2007.78	PASS	AB=0.807;AC=23;AF=0.411;AN=56;BaseQRankSum=7.540;DP=402;FS=1.115;HRun=0;HaplotypeScore=101.1697;InbreedingCoeff=0.6226;MQ=70.36;MQ0=10;MQRankSum=-6.210;QD=14.34;ReadPosRankSum=3.117;VQSLOD=3.5183;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,7:17:9:91,9,0	0/0:10,0:10:20.92:0,21,304	0/0:66,0:33:43.52:0,44,902	0/0:59,0:25:36.68:0,37,579	0/0:13,0:13:14.85:0,15,107	0/0:9,0:9:20.90:0,21,292	0/0:14,0:14:33.11:0,33,538	1/1:6,12:17:45.15:597,45,0	1/1:5,5:10:9:90,9,0	0/0:18,0:18:51.12:0,51,844	0/0:11,0:11:27.02:0,27,423	0/0:10,0:10:20.02:0,20,288	0/0:6,0:5:14.97:0,15,173	0/0:8,1:9:18.42:0,18,245	0/0:9,1:10:10.16:0,10,236	0/1:9,1:10:18.57:19,0,445	1/1:4,3:6:12.02:136,12,0	1/1:5,2:7:18.03:220,18,0	1/1:5,0:5:15.04:188,15,0	1/1:9,4:13:12:120,12,0	0/1:5,2:7:0:0,0,0	0/1:9,3:12:58.87:59,0,234	0/1:4,1:5:19.71:20,0,112	0/0:9,0:8:17.88:0,18,210	0/0:17,0:17:27.09:0,27,426	0/1:9,6:15:14.99:368,0,15	1/1:5,4:9:21.03:238,21,0	1/1:4,1:5:6.01:65,6,0
chr10	110256588	.	GACACACAC	G	1302.93	PASS	AB=1.000;AC=22;AF=0.478;AN=46;BaseQRankSum=5.522;DP=398;FS=5.169;HRun=0;HaplotypeScore=134.1009;InbreedingCoeff=0.5422;MQ=69.33;MQ0=10;MQRankSum=-3.896;QD=10.42;ReadPosRankSum=0.813;VQSLOD=2.4280;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:46.71:94,0,47	0/0:9,0:9:12.03:0,12,232	./.	0/0:60,0:25:0.47:0,0,1	1/1:3,8:12:9.50:225,10,0	1/1:5,3:9:9.03:180,9,0	1/1:10,0:13:3.01:39,3,0	./.	1/1:11,0:11:0.53:94,1,0	0/0:17,0:17:18.06:0,18,476	0/0:11,0:12:12.02:0,12,256	0/0:7,0:11:9.01:0,9,144	0/0:4,0:5:12.02:0,12,186	0/0:8,0:9:9.03:0,9,195	./.	0/0:10,0:10:18.06:0,18,580	1/1:7,0:6:6.02:99,6,0	0/1:8,0:8:60.01:146,0,60	1/1:5,0:5:6.02:102,6,0	1/1:13,0:13:9.03:153,9,0	./.	0/0:10,0:12:12.04:0,12,285	0/0:5,0:5:6:0,6,73	0/0:4,0:7:9.01:0,9,153	./.	1/1:15,0:15:6.02:98,6,0	1/1:9,0:9:12.03:185,12,0	1/1:5,0:5:3.01:51,3,0
chr10	110256861	.	TATA	T	3467.19	PASS	AB=0.953;AC=43;AF=0.827;AN=52;BaseQRankSum=-0.463;DP=277;FS=17.836;HRun=0;HaplotypeScore=88.7509;InbreedingCoeff=0.0758;MQ=56.44;MQ0=7;MQRankSum=-1.639;QD=13.81;ReadPosRankSum=-2.947;VQSLOD=1.4749;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,4:19:20.89:209,21,0	0/1:3,1:4:3.25:74,0,3	0/1:27,1:7:26.74:27,0,94	0/0:16,0:11:0.43:0,0,91	0/1:15,0:14:5.08:51,0,5	0/1:17,0:16:30.96:31,0,49	1/1:15,0:15:2.24:64,2,0	1/1:1,6:14:39.12:469,39,0	1/1:2,0:8:20.94:207,21,0	1/1:12,5:16:21.07:286,21,0	1/1:4,5:9:23.23:258,23,0	1/1:4,4:8:12.39:195,12,0	1/1:5,2:6:7.67:121,8,0	1/1:5,1:6:11.66:200,12,0	1/1:6,2:8:7.47:91,7,0	1/1:7,3:10:24.04:298,24,0	1/1:7,1:10:8.94:84,9,0	./.	1/1:2,1:7:18.04:195,18,0	./.	1/1:2,0:3:3.01:35,3,0	1/1:3,2:5:5.08:64,5,0	0/0:1,0:1:2.04:0,2,6	1/1:3,2:5:5.22:44,5,0	0/1:4,0:3:11.67:12,0,16	1/1:4,0:9:20.73:209,21,0	1/1:6,0:11:15.04:166,15,0	1/1:6,1:9:8.81:79,9,0
chr10	110256867	.	GGT	G	1298.54	PASS	AB=0.667;AC=17;AF=0.327;AN=52;BaseQRankSum=6.490;DP=237;FS=63.615;HRun=0;HaplotypeScore=102.1494;InbreedingCoeff=0.7947;MQ=61.03;MQ0=5;MQRankSum=-4.642;QD=23.61;ReadPosRankSum=3.210;VQSLOD=1.7523;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,4:9:16.82:191,17,0	0/0:6,0:6:17.94:0,18,171	0/0:22,0:9:27.07:0,27,391	0/0:16,0:12:26.79:0,27,401	0/0:11,0:10:18:0,18,253	0/0:20,0:19:51.10:0,51,722	0/0:9,0:9:21:0,21,263	1/1:6,7:13:32.90:326,33,0	1/1:1,6:7:20.55:225,21,0	0/0:9,0:8:20.81:0,21,145	0/0:13,0:13:35.82:0,36,299	0/0:12,0:12:29.83:0,30,251	0/0:7,0:7:14.92:0,15,142	0/0:9,0:9:26.84:0,27,234	0/0:9,0:9:20.96:0,21,224	0/0:10,0:10:26.79:0,27,212	1/1:1,2:3:6.49:72,6,0	./.	1/1:1,5:6:17.08:183,17,0	./.	1/1:0,1:1:3.01:37,3,0	0/0:6,0:6:11.02:0,11,135	0/0:4,0:4:9.01:0,9,121	0/0:7,0:7:4.68:0,5,28	0/0:12,0:11:33.01:0,33,384	0/1:4,4:8:58.68:196,0,59	1/1:0,5:5:15.05:182,15,0	1/1:1,2:3:6.02:73,6,0
chr10	110256869	.	TTGC	T	2405.13	PASS	AB=1.000;AC=39;AF=0.722;AN=54;BaseQRankSum=4.040;DP=304;FS=5.702;HRun=0;HaplotypeScore=118.6277;InbreedingCoeff=0.0504;MQ=65.42;MQ0=5;MQRankSum=-0.822;QD=8.78;ReadPosRankSum=2.375;VQSLOD=2.7902;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,2:19:38.82:336,39,0	0/1:7,0:7:17.94:37,0,18	0/1:23,0:12:10.08:10,0,36	0/1:19,0:15:7.15:7,0,58	0/1:11,0:10:7.52:8,0,37	0/0:22,0:21:12.39:0,12,159	0/1:12,0:12:0.91:1,0,22	1/1:18,1:19:38.47:378,38,0	1/1:7,0:7:18.05:206,18,0	1/1:13,0:12:24.29:174,24,0	1/1:13,0:13:2:89,2,0	0/1:13,0:13:8.02:83,0,8	0/1:7,0:7:5.76:52,0,6	0/1:10,0:10:5.95:85,0,6	0/1:9,0:9:13.77:37,0,14	1/1:10,0:10:16.94:141,17,0	1/1:10,0:10:23.81:186,24,0	1/1:4,0:4:0.47:1,0,0	1/1:10,0:10:17.63:189,18,0	./.	1/1:5,0:5:5.98:55,6,0	0/1:7,0:7:9.09:9,0,27	0/0:4,0:4:4.30:0,4,23	1/1:8,0:8:6.82:42,7,0	0/1:14,0:13:10.07:10,0,49	1/1:9,2:11:13.31:194,13,0	1/1:8,0:8:14.56:167,15,0	1/1:3,0:3:6.01:63,6,0
chr10	110257175	.	G	GAAA	8433.58	PASS	AB=0.920;AC=24;AF=0.429;AN=56;BaseQRankSum=-8.048;DP=584;FS=3.725;HRun=9;HaplotypeScore=87.1167;InbreedingCoeff=0.8669;MQ=71.97;MQ0=0;MQRankSum=-4.520;QD=29.39;ReadPosRankSum=-2.515;VQSLOD=3.5212;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,17:24:37.68:678,38,0	0/0:7,0:7:15.01:0,15,176	0/1:19,0:19:5.81:6,0,247	0/1:17,0:19:16.97:17,0,219	0/0:29,0:31:60.03:0,60,723	0/0:22,0:22:54.13:0,54,682	0/0:19,0:20:51.07:0,51,623	1/1:13,21:36:84.26:1511,84,0	1/1:4,9:14:30.55:535,31,0	0/0:39,0:39:99:0,102,1275	0/0:16,0:17:42.05:0,42,511	0/0:13,0:14:36.03:0,36,433	0/0:16,0:16:42.09:0,42,516	0/0:14,0:15:45.08:0,45,548	0/0:24,0:24:69.22:0,69,871	0/0:17,0:17:45.07:0,45,538	1/1:1,20:24:48.14:897,48,0	1/1:1,9:10:18.06:355,18,0	1/1:8,13:24:46.36:822,46,0	1/1:5,17:25:39.11:631,39,0	1/1:5,10:16:30.07:484,30,0	0/0:21,0:21:45.10:0,45,568	0/0:21,0:21:42.07:0,42,530	0/0:11,0:11:33.11:0,33,417	0/0:22,0:22:57.15:0,57,708	1/1:6,15:24:54.14:976,54,0	1/1:8,11:24:41.81:699,42,0	1/1:4,17:25:45.15:823,45,0
chr10	110258258	.	C	CT	1295.20	PASS	AB=0.851;AC=11;AF=0.275;AN=40;BaseQRankSum=1.532;DP=472;FS=12.289;HRun=1;HaplotypeScore=95.2604;InbreedingCoeff=0.2580;MQ=38.35;MQ0=119;MQRankSum=-0.938;QD=8.36;ReadPosRankSum=-3.142;VQSLOD=-0.7502;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:8,0:7:14.94:0,15,171	./.	./.	0/1:15,5:18:84.08:206,0,84	0/1:22,10:29:99:432,0,165	0/1:22,7:22:99:372,0,224	1/1:10,0:3:4.14:25,4,0	./.	0/0:21,0:18:39.45:0,39,645	0/0:22,0:19:39.11:0,39,493	0/0:27,0:26:23.54:0,24,180	0/0:22,0:18:17.43:0,17,119	0/0:26,0:23:52.53:0,53,430	0/0:36,0:31:57.91:0,58,438	0/0:38,0:30:78.25:0,78,1006	1/1:13,0:2:2.92:17,3,0	./.	1/1:8,0:2:2.74:12,3,0	./.	0/1:11,0:2:0:0,0,0	0/0:21,0:19:37.14:0,37,214	0/0:24,0:18:22.50:0,23,132	0/0:26,0:17:31.68:0,32,194	0/1:28,4:28:60.60:353,0,61	0/0:5,0:1:3.01:0,3,39	./.	./.
chr10	110258259	.	TCTTCC	T	2069.09	PASS	AB=0.979;AC=12;AF=0.273;AN=44;BaseQRankSum=7.110;DP=467;FS=24.655;HRun=0;HaplotypeScore=105.2308;InbreedingCoeff=-0.2674;MQ=38.12;MQ0=119;MQRankSum=3.353;QD=7.31;ReadPosRankSum=3.818;VQSLOD=0.5857;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:1:1.82:5,2,0	0/0:8,0:7:14.02:0,14,126	./.	./.	0/1:21,0:19:99:345,0,115	0/1:31,1:29:99:641,0,133	0/1:25,3:21:99:519,0,218	0/0:10,0:3:4.99:0,5,37	./.	0/0:21,0:18:51.43:0,51,589	0/0:22,0:19:38.95:0,39,427	0/1:27,0:26:5.27:5,0,93	0/0:22,0:18:12.20:0,12,87	0/1:26,0:23:24.72:25,0,233	0/1:34,0:29:59.36:59,0,226	0/0:37,0:29:73.93:0,74,619	0/0:13,0:2:5.91:0,6,38	0/0:11,0:2:5.94:0,6,42	0/0:8,0:2:5.94:0,6,41	./.	0/0:11,0:2:5.80:0,6,31	0/1:21,0:19:29.20:72,0,29	0/1:24,0:18:8.44:24,0,8	0/1:25,0:16:40.39:47,0,40	0/1:29,3:28:73.08:454,0,73	0/0:5,0:1:3.01:0,3,42	./.	./.
chr10	110258264	.	C	CT	2175.72	PASS	AB=0.887;AC=14;AF=0.318;AN=44;BaseQRankSum=4.320;DP=476;FS=2.521;HRun=1;HaplotypeScore=83.9577;InbreedingCoeff=-0.1367;MQ=37.07;MQ0=123;MQRankSum=-0.987;QD=7.16;ReadPosRankSum=1.422;VQSLOD=0.8879;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:1:1.55:4,2,0	0/0:9,0:8:13.83:0,14,142	./.	./.	0/1:22,1:21:30.29:30,0,150	0/1:29,1:27:52.96:53,0,212	0/1:31,0:24:0.73:1,0,254	0/0:13,0:4:8.90:0,9,55	./.	0/0:23,0:20:50.52:0,51,609	0/0:24,0:21:39.12:0,39,498	0/1:28,0:27:52.06:166,0,52	0/1:21,0:17:41.75:99,0,42	0/1:18,6:21:99:323,0,194	0/1:22,12:29:99:512,0,196	0/0:38,0:30:75.24:0,75,960	0/0:13,0:2:5.99:0,6,48	0/0:12,0:3:5.61:0,6,50	0/0:8,0:2:6:0,6,59	./.	0/0:11,0:2:5.97:0,6,46	0/1:12,9:19:6.03:381,0,6	1/1:20,4:18:18.60:264,19,0	0/1:16,9:16:20.66:384,0,21	0/1:28,1:25:83.63:92,0,84	0/0:5,0:1:3.01:0,3,38	./.	./.
chr10	110258265	.	TCTTCC	T	4276.33	PASS	AB=0.894;AC=14;AF=0.318;AN=44;BaseQRankSum=2.992;DP=469;FS=9.992;HRun=0;HaplotypeScore=94.9258;InbreedingCoeff=-0.2107;MQ=37.02;MQ0=120;MQRankSum=2.659;QD=14.25;ReadPosRankSum=0.350;VQSLOD=3.5953;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:1:1.25:3,1,0	0/0:9,0:8:13.20:0,13,106	./.	./.	0/1:24,0:22:99:138,0,127	0/1:30,0:27:99:357,0,133	0/1:31,0:24:99:177,0,175	0/0:13,0:4:0.48:0,0,49	./.	0/0:23,0:20:48.57:0,49,508	0/0:24,0:21:44.29:0,44,465	0/1:9,18:26:9.36:295,0,9	0/1:9,11:16:30.30:160,0,30	0/1:20,3:20:99:530,0,157	0/1:29,4:28:99:849,0,143	0/0:38,0:30:70.92:0,71,583	0/0:13,0:2:6:0,6,53	0/0:12,0:3:3.10:0,3,61	0/0:7,0:2:6.02:0,6,67	./.	0/0:10,0:2:5.97:0,6,48	0/1:20,1:19:24.47:614,0,24	1/1:21,2:17:24.18:433,24,0	0/1:24,1:16:46.46:583,0,46	0/1:29,0:25:88.08:138,0,88	0/0:5,0:1:3:0,3,27	./.	./.
chr10	110258267	.	TTCC	T	2989.27	PASS	AB=0.842;AC=40;AF=0.909;AN=44;BaseQRankSum=3.326;DP=478;FS=7.984;HRun=0;HaplotypeScore=90.5893;InbreedingCoeff=0.2295;MQ=36.77;MQ0=121;MQRankSum=-0.120;QD=6.51;ReadPosRankSum=0.458;VQSLOD=1.5785;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:1:1.25:3,1,0	1/1:3,5:7:7.11:38,7,0	./.	./.	1/1:24,0:22:36.75:198,37,0	1/1:29,0:26:49.99:280,50,0	1/1:32,0:24:35.57:188,36,0	1/1:14,0:4:4:10,4,0	./.	0/1:23,0:20:40.99:225,0,41	0/1:14,12:22:7.31:77,0,7	1/1:28,0:27:16.89:92,17,0	1/1:21,0:17:10.21:54,10,0	1/1:25,0:22:36.17:233,36,0	1/1:33,0:28:58.44:418,58,0	1/1:38,0:30:56.03:421,56,0	1/1:13,0:2:3.11:8,3,0	1/1:12,0:3:3.11:8,3,0	1/1:8,0:2:3.11:7,3,0	./.	1/1:10,0:2:3.11:8,3,0	1/1:24,0:21:34.60:262,35,0	1/1:23,0:17:24.04:173,24,0	1/1:25,0:16:31.22:224,31,0	1/1:29,0:25:30.79:159,31,0	0/0:5,0:1:0.47:0,0,1	./.	./.
chr10	110258269	.	CCT	C	272.64	PASS	AB=0.984;AC=10;AF=0.227;AN=44;BaseQRankSum=2.728;DP=475;FS=13.431;HRun=0;HaplotypeScore=94.7433;InbreedingCoeff=0.1065;MQ=36.57;MQ0=121;MQRankSum=-5.893;QD=1.35;ReadPosRankSum=-4.178;VQSLOD=-0.5882;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:1:2.22:0,2,7	0/0:8,0:7:9.44:0,9,82	./.	./.	0/0:24,0:22:44.17:0,44,257	0/1:29,0:26:54.66:55,0,252	0/0:29,0:21:18.77:0,19,148	0/1:15,0:4:2.91:3,0,53	./.	0/0:24,0:20:48.21:0,48,423	0/0:26,0:22:44.45:0,44,480	1/1:25,3:27:11.12:206,11,0	0/1:21,0:17:8.60:13,0,9	0/0:26,0:23:8.47:0,8,107	0/1:34,0:29:45.11:45,0,172	0/0:36,0:28:61.90:0,62,485	0/0:13,0:2:6.01:0,6,56	0/0:12,0:3:3.10:0,3,71	0/0:7,0:2:6.02:0,6,70	./.	0/0:10,0:2:5.98:0,6,55	0/0:25,0:22:15.20:0,15,73	1/1:23,0:17:0.36:62,0,0	0/1:24,0:15:1.71:2,0,76	0/1:25,3:24:5.72:6,0,192	0/0:5,0:1:2.22:0,2,7	./.	./.
chr10	110258280	.	T	TC	1377.63	PASS	AB=0.806;AC=13;AF=0.310;AN=42;BaseQRankSum=-6.664;DP=511;FS=7.417;HRun=1;HaplotypeScore=81.3287;InbreedingCoeff=-0.3193;MQ=36.39;MQ0=128;MQRankSum=-6.385;QD=4.10;ReadPosRankSum=5.053;VQSLOD=0.4324;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:1:1.25:3,1,0	0/0:7,0:6:6.02:0,6,77	./.	./.	0/1:22,9:27:99:109,0,594	0/1:24,8:29:99:103,0,552	0/1:18,15:19:3.48:261,0,3	0/0:15,0:4:7.20:0,7,45	./.	0/0:24,0:20:51.15:0,51,647	0/0:29,0:25:53.76:0,54,667	0/1:27,2:28:25.29:25,0,175	0/1:19,1:16:31.18:31,0,52	0/1:16,12:25:99:260,0,214	0/1:27,10:34:99:297,0,442	0/0:33,0:25:60.20:0,60,777	0/0:16,0:4:5.94:0,6,41	0/0:14,0:5:6.84:0,7,43	0/0:6,0:2:5.95:0,6,42	./.	0/0:10,0:2:5.92:0,6,42	0/1:17,8:22:94.68:95,0,317	0/1:27,0:21:56.08:56,0,160	0/1:19,11:20:99:217,0,318	0/1:19,9:24:48.93:49,0,318	./.	./.	./.
chr10	110258967	.	C	CAT	20500.10	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-13.079;DP=492;FS=18.339;HRun=0;HaplotypeScore=46.5122;InbreedingCoeff=0.9970;MQ=83.05;MQ0=6;MQRankSum=-5.306;QD=51.51;ReadPosRankSum=2.500;VQSLOD=3.8541;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:21:54.19:1095,54,0	0/0:7,0:7:21.07:0,21,342	0/0:20,0:20:53.31:0,53,879	0/0:12,0:12:36.11:0,36,548	1/1:0,20:21:48.16:974,48,0	1/1:1,22:23:60.21:1218,60,0	1/1:0,16:16:36.12:731,36,0	1/1:0,30:31:93.31:1830,93,0	1/1:0,14:15:39.13:792,39,0	0/0:23,0:23:69.24:0,69,1123	0/0:16,0:16:48.16:0,48,774	1/1:1,14:15:27.09:548,27,0	1/1:1,17:18:42.14:853,42,0	1/1:0,12:12:33.11:670,33,0	1/1:0,17:17:48.16:974,48,0	0/0:16,0:16:48.16:0,48,778	1/1:0,35:35:87.30:1766,87,0	1/1:0,24:23:66.23:1339,66,0	1/1:0,16:18:51.15:965,51,0	1/1:1,11:12:27.09:548,27,0	1/1:0,8:9:21.07:426,21,0	1/1:0,11:11:27.09:548,27,0	1/1:0,8:8:24.08:487,24,0	1/1:0,12:12:33.11:670,33,0	1/1:0,12:11:33.11:670,33,0	1/1:0,20:21:60.18:1141,60,0	1/1:0,32:32:78.27:1583,78,0	1/1:0,13:11:33.11:670,33,0
chr10	110259078	.	AT	A	6828.82	PASS	AB=1.000;AC=35;AF=0.648;AN=54;BaseQRankSum=8.794;DP=410;FS=3.177;HRun=7;HaplotypeScore=47.3126;InbreedingCoeff=0.8816;MQ=72.26;MQ0=0;MQRankSum=-1.850;QD=24.13;ReadPosRankSum=0.170;VQSLOD=4.7707;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,14:19:42.09:428,42,0	0/0:7,0:7:18.06:0,18,226	0/0:18,1:14:23.91:0,24,316	0/1:24,0:15:4.31:4,0,212	0/0:23,0:23:57.18:0,57,717	0/0:19,0:19:54.17:0,54,679	0/0:4,0:4:3.01:0,3,38	1/1:7,21:28:63.13:643,63,0	1/1:1,7:8:18.04:184,18,0	0/0:13,0:13:36.12:0,36,453	0/0:20,0:20:54.17:0,54,679	1/1:1,12:13:33.07:337,33,0	1/1:0,11:11:27.06:275,27,0	1/1:0,12:12:36.08:367,36,0	1/1:0,9:9:21.05:214,21,0	0/0:7,0:7:18.06:0,18,226	1/1:1,23:24:69.15:704,69,0	1/1:0,17:17:45.10:459,45,0	1/1:5,20:25:60.14:612,60,0	1/1:1,23:24:66.15:673,66,0	1/1:1,2:3:6.01:61,6,0	./.	1/1:1,6:7:15.01:153,15,0	1/1:0,3:3:9.02:92,9,0	0/0:13,0:13:30.10:0,30,377	1/1:1,18:19:54.12:551,54,0	1/1:0,18:18:48.11:490,48,0	1/1:0,19:19:57.13:582,57,0
chr10	110259758	.	AG	A	7821.47	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=13.415;DP=606;FS=14.892;HRun=6;HaplotypeScore=70.7887;InbreedingCoeff=0.9979;MQ=68.98;MQ0=0;MQRankSum=-3.592;QD=27.16;ReadPosRankSum=1.916;VQSLOD=4.0110;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,39:41:99:1192,111,0	0/0:7,0:7:21.07:0,21,276	0/0:19,0:16:45.14:0,45,565	0/0:23,0:23:54.16:0,54,676	0/0:14,0:14:42.13:0,42,539	0/0:19,0:19:48.05:0,48,590	0/0:24,0:24:63.16:0,63,809	1/1:8,26:34:69.12:721,69,0	1/1:2,17:19:42.10:451,42,0	0/0:10,0:10:24.08:0,24,316	0/0:21,0:21:60.18:0,60,774	0/0:34,0:34:99:0,99,1274	0/0:16,0:16:45.15:0,45,591	0/0:26,0:26:72.19:0,72,893	0/0:26,0:26:69.20:0,69,888	0/0:20,0:20:60.19:0,60,783	1/1:0,27:27:72.18:774,72,0	1/1:2,26:28:66.17:709,66,0	1/1:1,17:18:51.13:548,51,0	1/1:2,16:18:48.08:503,48,0	1/1:0,34:34:93.23:999,93,0	0/0:15,0:15:42.12:0,42,538	0/0:7,0:7:18.06:0,18,230	0/0:20,0:20:60.18:0,60,775	0/0:17,0:17:39.13:0,39,512	1/1:3,17:20:51.10:537,51,0	1/1:2,23:25:60.15:645,60,0	1/1:1,23:24:69.17:741,69,0
chr10	110259936	.	GT	G	6201.29	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=1.243;DP=619;FS=4.307;HRun=8;HaplotypeScore=93.4749;InbreedingCoeff=0.9852;MQ=70.16;MQ0=2;MQRankSum=-0.297;QD=23.85;ReadPosRankSum=0.683;VQSLOD=5.2541;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:66.10:636,66,0	0/0:14,0:14:33.10:0,33,399	0/0:37,0:24:8.13:0,8,311	0/0:21,0:14:11.81:0,12,94	0/0:23,0:23:66.20:0,66,780	0/0:21,0:21:57.17:0,57,688	0/0:25,0:25:69.21:0,69,830	1/1:5,25:30:75.08:713,75,0	1/1:1,15:16:42.07:406,42,0	0/0:19,0:19:51.16:0,51,615	0/0:18,0:18:54.17:0,54,652	0/0:26,0:27:72.09:0,72,845	0/0:25,0:25:75.21:0,75,891	0/0:24,0:24:60.18:0,60,724	0/0:17,0:17:36.08:0,36,420	0/0:23,0:23:63.19:0,63,759	1/1:0,26:26:69.11:666,69,0	1/1:2,13:15:28.29:264,28,0	1/1:4,17:19:41.53:447,42,0	1/1:1,29:30:87.14:840,87,0	1/1:6,17:23:48.07:463,48,0	0/0:19,0:19:57.17:0,57,688	0/0:12,0:12:33.10:0,33,397	0/0:22,0:22:60.18:0,60,725	0/0:11,0:11:33.10:0,33,398	1/1:4,18:22:54.09:521,54,0	1/1:2,26:28:69.10:666,69,0	1/1:0,23:23:60.10:579,60,0
chr10	110260711	.	G	GC	5739.12	PASS	AB=0.571;AC=37;AF=0.712;AN=52;BaseQRankSum=2.552;DP=387;FS=14.773;HRun=8;HaplotypeScore=59.3405;InbreedingCoeff=0.8401;MQ=73.59;MQ0=1;MQRankSum=-4.624;QD=19.32;ReadPosRankSum=2.185;VQSLOD=3.5394;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,19:25:45.13:520,45,0	0/0:8,0:8:21:0,21,188	0/0:10,0:9:14.99:0,15,135	0/0:14,0:11:23.46:0,23,185	0/1:1,0:4:0:0,0,0	./.	1/1:10,0:23:19.94:103,20,0	1/1:6,14:21:39.12:450,39,0	1/1:1,17:18:39.12:450,39,0	0/0:19,0:19:48.01:0,48,439	0/0:12,0:12:26.99:0,27,242	1/1:5,0:5:2.37:8,2,0	1/1:5,0:8:11.48:62,11,0	1/1:0,0:7:11.36:58,11,0	1/1:7,2:14:11.36:58,11,0	0/0:15,0:15:45.02:0,45,412	1/1:4,21:25:60.18:692,60,0	1/1:1,17:18:45.13:519,45,0	1/1:4,16:20:51.15:588,51,0	1/1:2,10:12:27.04:297,27,0	1/1:4,28:32:66.20:762,66,0	./.	0/0:0,0:4:0:0,0,0	1/1:4,0:13:5.68:29,6,0	1/1:3,0:6:6.28:35,6,0	1/1:3,7:10:21.06:242,21,0	1/1:2,22:24:60.18:692,60,0	1/1:5,6:11:15.04:173,15,0
chr10	110262195	.	ATTGAC	A	13257.55	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=18.058;DP=672;FS=7.617;HRun=0;HaplotypeScore=126.6687;InbreedingCoeff=0.9997;MQ=87.69;MQ0=0;MQRankSum=-9.484;QD=53.24;ReadPosRankSum=1.417;VQSLOD=5.3781;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:81.28:1735,81,0	0/0:11,0:11:30.05:0,30,785	0/0:31,0:31:90.31:0,90,2628	0/0:20,0:20:54.18:0,54,1540	0/0:35,0:35:99:0,105,3307	0/0:26,0:26:78.27:0,78,2424	0/0:24,0:24:69.24:0,69,2125	1/1:3,35:38:99:2035,102,0	1/1:1,24:25:63.22:1356,63,0	0/0:22,0:22:63.22:0,63,1969	0/0:28,0:28:84.27:0,84,2520	0/0:23,0:23:66.23:0,66,2021	0/0:22,0:22:54.19:0,54,1712	0/0:24,0:24:72.25:0,72,2281	0/0:35,0:35:99:0,105,3226	0/0:25,0:25:72.25:0,72,2224	1/1:1,27:28:60.21:1287,60,0	1/1:0,11:11:27.04:585,27,0	1/1:1,11:12:33.11:644,33,0	1/1:1,16:17:45.15:964,45,0	1/1:2,29:31:78.27:1681,78,0	0/0:18,0:18:51.18:0,51,1617	0/0:29,0:29:87.30:0,87,2760	0/0:26,0:26:75.26:0,75,2357	0/0:24,0:24:69.24:0,69,2138	1/1:1,21:22:63.22:1356,63,0	1/1:1,15:16:39.13:833,39,0	1/1:1,13:14:36.12:782,36,0
chr10	110262523	.	AT	A	6967.11	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=9.221;DP=614;FS=0.331;HRun=11;HaplotypeScore=71.0093;InbreedingCoeff=0.9771;MQ=74.16;MQ0=0;MQRankSum=-1.652;QD=19.25;ReadPosRankSum=1.186;VQSLOD=5.8329;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,37:43:99:874,109,0	0/0:15,0:15:30.06:0,30,311	0/0:19,1:15:3.87:0,4,190	0/0:19,0:19:33.61:0,34,283	1/1:5,23:31:63.06:487,63,0	1/1:1,14:16:40.99:326,41,0	1/1:2,12:14:29.96:246,30,0	1/1:7,36:43:76.33:823,76,0	1/1:3,21:24:56.93:468,57,0	0/0:25,1:26:26.48:0,26,482	0/0:17,0:17:30.07:0,30,316	0/0:14,1:15:17.17:0,17,358	0/0:17,0:18:44.93:0,45,454	0/0:17,0:17:39.06:0,39,398	0/0:21,0:21:54.14:0,54,576	0/0:15,0:15:45.11:0,45,480	1/1:2,24:26:68.92:567,69,0	1/1:4,16:21:46.98:375,47,0	1/1:5,19:24:56.87:461,57,0	1/1:2,13:15:38.95:320,39,0	1/1:4,16:20:47.31:377,47,0	0/0:17,0:17:48.10:0,48,497	0/0:23,0:23:51.13:0,51,544	0/0:28,0:28:81.20:0,81,863	1/1:5,13:18:32.95:271,33,0	1/1:3,27:31:82.92:668,83,0	1/1:3,19:27:55.47:483,55,0	1/1:1,8:9:26.97:221,27,0
chr10	110264578	.	C	CAA	4208.55	PASS	AB=0.691;AC=34;AF=0.607;AN=56;BaseQRankSum=5.421;DP=477;FS=0.432;HRun=13;HaplotypeScore=75.1255;InbreedingCoeff=0.6795;MQ=57.16;MQ0=5;MQRankSum=-2.963;QD=12.83;ReadPosRankSum=-1.691;VQSLOD=2.1116;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,12:24:50.45:582,50,0	0/0:12,0:12:29.97:0,30,260	0/1:6,0:5:18.10:18,0,31	0/0:4,0:3:2.97:0,3,27	0/0:26,0:28:50.33:0,50,478	0/0:25,0:26:71.70:0,72,619	0/0:10,0:10:24:0,24,211	1/1:11,8:21:36.35:370,36,0	1/1:4,6:12:14.01:125,14,0	0/0:22,0:25:54.88:0,55,446	0/0:21,0:22:47.61:0,48,408	0/1:4,1:14:4.14:66,0,4	1/1:9,0:16:12.48:44,12,0	1/1:4,1:15:25.80:129,26,0	0/1:7,0:16:31.09:31,0,31	0/0:11,0:11:23.97:0,24,211	1/1:10,11:22:38.09:446,38,0	1/1:5,2:9:16.52:144,17,0	1/1:8,10:20:37.99:410,38,0	1/1:12,13:25:35.60:434,36,0	1/1:0,6:7:17.95:189,18,0	0/1:11,2:22:25.48:76,0,25	1/1:4,1:14:15.49:84,15,0	1/1:4,0:14:19.84:69,20,0	0/0:9,0:11:32.47:0,32,258	1/1:8,10:23:16.03:433,16,0	1/1:9,9:22:33.63:381,34,0	1/1:7,3:13:19.52:176,20,0
chr10	110265994	.	T	TA	12219.64	PASS	AB=0.559;AC=43;AF=0.768;AN=56;BaseQRankSum=-11.634;DP=517;FS=8.747;HRun=7;HaplotypeScore=48.5567;InbreedingCoeff=0.9084;MQ=71.94;MQ0=1;MQRankSum=-3.070;QD=29.59;ReadPosRankSum=3.369;VQSLOD=5.0953;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:51.16:616,51,0	0/0:15,0:15:42.07:0,42,405	0/0:13,0:13:32.64:0,33,280	0/0:8,0:7:14.18:0,14,106	1/1:4,36:40:99:1264,108,0	1/1:1,17:18:42.13:507,42,0	1/1:1,8:9:24.07:290,24,0	1/1:8,22:30:40.39:731,40,0	1/1:2,16:18:36.11:435,36,0	0/0:24,0:24:69.10:0,69,663	0/0:27,0:27:72.08:0,72,685	1/1:1,19:21:54.17:651,54,0	1/1:3,12:15:39.09:457,39,0	1/1:2,13:15:39.10:458,39,0	1/1:0,16:16:48.15:580,48,0	0/0:16,0:16:45.04:0,45,423	1/1:3,17:19:48.08:561,48,0	1/1:1,15:15:36.11:435,36,0	1/1:3,21:24:63.16:736,63,0	1/1:1,24:25:69.06:781,69,0	1/1:1,10:11:30.09:362,30,0	1/1:2,6:8:15.05:181,15,0	1/1:1,10:11:27.08:326,27,0	1/1:1,10:11:24.07:290,24,0	1/1:2,18:20:54.17:652,54,0	0/1:4,15:19:6.78:492,0,7	1/1:3,27:30:69.10:833,69,0	1/1:0,16:16:48.15:580,48,0
chr10	110267098	.	ATT	A	4653.95	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=13.890;DP=522;FS=1.182;HRun=12;HaplotypeScore=83.0649;InbreedingCoeff=0.9901;MQ=71.26;MQ0=2;MQRankSum=-2.583;QD=21.15;ReadPosRankSum=2.924;VQSLOD=4.6425;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:36.08:366,36,0	0/0:10,0:11:23.54:0,24,299	0/0:19,0:9:17.54:0,18,133	0/0:16,0:14:19.07:0,19,166	0/0:19,0:19:54.12:0,54,739	0/0:14,0:17:47.12:0,47,608	0/0:21,0:25:65.19:0,65,897	1/1:7,17:25:50.77:480,51,0	1/1:2,21:23:51.10:519,51,0	0/0:22,0:25:64.66:0,65,840	0/0:17,0:17:42.11:0,42,585	0/0:21,0:21:51.17:0,51,761	0/0:12,0:13:35.61:0,36,499	0/0:17,0:17:48.16:0,48,714	0/0:20,0:21:23.10:0,23,648	0/0:16,1:18:17.12:0,17,585	1/1:3,12:15:27.05:275,27,0	1/1:2,15:17:20.44:318,20,0	1/1:5,14:20:35.79:418,36,0	1/1:1,22:23:60.08:609,60,0	1/1:1,13:15:26.77:256,27,0	0/0:9,0:11:31.81:0,32,417	0/0:19,0:19:57.18:0,57,831	0/0:13,0:13:33.11:0,33,490	0/0:14,0:19:55.64:0,56,711	1/1:5,17:23:50.79:492,51,0	1/1:4,31:37:68.33:799,68,0	1/1:0,4:4:12.03:122,12,0
chr10	110267362	.	TTTC	T	9390.69	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.466;DP=535;FS=8.134;HRun=0;HaplotypeScore=94.4174;InbreedingCoeff=0.9950;MQ=82.94;MQ0=0;MQRankSum=-6.708;QD=38.80;ReadPosRankSum=0.804;VQSLOD=5.8649;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,12:15:27.09:441,27,0	0/0:6,0:6:12.04:0,12,261	0/0:14,0:14:36.07:0,36,637	0/0:20,0:20:48.12:0,48,922	0/0:28,0:28:78.26:0,78,1689	0/0:27,0:27:78.25:0,78,1689	0/0:14,0:14:42.13:0,42,896	1/1:6,37:43:99:1777,111,0	1/1:2,13:15:30.10:490,30,0	0/0:26,0:26:75.25:0,75,1611	0/0:20,0:20:54.13:0,54,1117	0/0:15,0:15:42.13:0,42,882	0/0:12,0:12:33.11:0,33,731	0/0:18,0:18:51.17:0,51,1111	0/0:21,0:21:60.21:0,60,1335	0/0:14,0:14:42.13:0,42,891	1/1:1,22:23:51.17:819,51,0	1/1:2,11:13:27.09:441,27,0	1/1:2,18:20:54.16:853,54,0	1/1:1,26:27:69.19:1093,69,0	1/1:2,18:20:48.16:784,48,0	0/0:14,0:14:42.14:0,42,926	0/0:14,0:14:39.13:0,39,840	0/0:15,0:15:45.15:0,45,981	0/0:15,0:15:45.15:0,45,1005	1/1:1,21:22:60.18:930,60,0	1/1:2,32:34:81.28:1323,81,0	1/1:0,10:10:27.09:441,27,0
chr10	110267485	.	T	TTA	12344.62	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.762;DP=590;FS=6.531;HRun=0;HaplotypeScore=89.9232;InbreedingCoeff=0.9661;MQ=83.13;MQ0=0;MQRankSum=-2.537;QD=46.76;ReadPosRankSum=-1.113;VQSLOD=5.0155;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:51.17:954,51,0	0/0:8,0:8:24.08:0,24,353	0/0:17,0:17:48.09:0,48,650	0/0:21,0:21:59.90:0,60,747	0/0:16,0:16:45.15:0,45,662	0/0:29,0:29:84.24:0,84,1176	0/0:15,0:15:39.11:0,39,551	1/1:8,29:38:99:1816,105,0	1/1:2,14:17:39.13:731,39,0	0/0:39,0:39:99:0,108,1566	0/0:20,0:20:57.18:0,57,820	0/0:27,0:27:75.25:0,75,1104	0/0:17,0:17:45.15:0,45,662	0/0:16,0:16:48.16:0,48,690	0/0:24,0:24:72.24:0,72,1060	0/0:18,1:19:0.98:0,1,702	1/1:1,9:10:27.09:479,27,0	1/1:1,10:11:30.10:561,30,0	1/1:2,22:28:81.18:1311,81,0	1/1:0,26:26:78.27:1448,78,0	1/1:1,28:29:69.24:1292,69,0	0/0:9,0:9:24.08:0,24,353	0/0:14,0:14:39.12:0,39,555	0/0:17,0:17:51.17:0,51,751	0/0:18,0:18:51.17:0,51,751	1/1:4,26:30:37.09:1410,37,0	1/1:3,36:40:90.78:1668,91,0	1/1:0,12:12:36.12:674,36,0
chr10	110267623	.	AC	A	7201.70	PASS	AB=0.553;AC=21;AF=0.375;AN=56;BaseQRankSum=-4.665;DP=492;FS=3.511;HRun=2;HaplotypeScore=66.8401;InbreedingCoeff=0.9181;MQ=81.15;MQ0=0;MQRankSum=-1.565;QD=35.30;ReadPosRankSum=-2.400;VQSLOD=4.4102;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:42.14:545,42,0	0/0:6,0:6:18.06:0,18,270	0/0:15,0:15:39.13:0,39,552	0/0:10,0:10:30.10:0,30,439	0/0:32,0:32:93.30:0,93,1368	0/0:20,0:20:60.20:0,60,890	0/0:13,0:13:39.13:0,39,581	1/1:0,30:30:87.26:1103,87,0	1/1:0,18:18:48.16:623,48,0	0/0:23,0:23:69.23:0,69,1022	0/0:20,0:20:57.18:0,57,832	0/0:25,0:25:72.24:0,72,1051	0/0:15,0:15:42.14:0,42,629	0/0:19,0:19:57.18:0,57,834	0/0:20,0:20:60.19:0,60,880	0/0:13,0:13:39.13:0,39,584	1/1:0,16:16:48.16:623,48,0	1/1:0,13:13:36.12:467,36,0	1/1:0,18:18:54.15:673,54,0	1/1:1,16:17:48.15:617,48,0	1/1:0,12:12:33.11:428,33,0	0/0:14,0:14:42.14:0,42,625	0/0:19,0:19:57.19:0,57,843	0/0:4,0:4:12.04:0,12,180	0/0:20,0:20:60.20:0,60,899	0/1:5,21:26:99:727,0,105	1/1:0,25:25:75.17:933,75,0	1/1:0,14:14:36.12:463,36,0
chr10	110267894	.	A	AT	9972.79	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-13.020;DP=616;FS=5.691;HRun=4;HaplotypeScore=63.5484;InbreedingCoeff=0.9992;MQ=76.25;MQ0=0;MQRankSum=-1.517;QD=36.94;ReadPosRankSum=2.245;VQSLOD=5.2016;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:81.27:1108,81,0	0/0:8,0:8:21.06:0,21,238	0/0:30,0:30:73.98:0,74,827	0/0:22,0:20:48.12:0,48,526	0/0:28,0:28:84.22:0,84,943	0/0:31,0:31:87.25:0,87,987	0/0:17,0:17:48.14:0,48,544	1/1:3,21:24:63.20:846,63,0	1/1:1,11:12:30.10:410,30,0	0/0:28,0:28:75.20:0,75,843	0/0:20,0:20:54.15:0,54,613	0/0:13,0:13:39.10:0,39,434	0/0:17,0:17:48.14:0,48,544	0/0:19,0:19:54.15:0,54,613	0/0:21,0:21:63.16:0,63,704	0/0:19,0:19:57.15:0,57,637	1/1:1,47:48:99:1764,129,0	1/1:0,18:18:51.17:697,51,0	1/1:0,21:21:60.18:803,60,0	1/1:2,23:25:69.19:923,69,0	1/1:0,22:22:54.18:739,54,0	0/0:16,0:16:48.14:0,48,544	0/0:20,0:20:60.16:0,60,670	0/0:14,0:14:36.09:0,36,399	0/0:22,0:22:63.17:0,63,705	1/1:1,31:32:93.29:1254,93,0	1/1:1,26:27:75.25:1020,75,0	1/1:0,11:11:30.10:410,30,0
chr10	110268760	.	TTTCTCTTGTAAGA	T	14027.99	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.799;DP=588;FS=1.211;HRun=0;HaplotypeScore=250.6659;InbreedingCoeff=0.9848;MQ=81.60;MQ0=0;MQRankSum=-15.663;QD=66.80;ReadPosRankSum=2.951;VQSLOD=4.5558;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,19:29:54.19:2136,54,0	0/0:12,0:12:36.12:0,36,2203	0/0:23,0:23:54.18:0,54,3141	0/0:23,0:23:60.20:0,60,3164	0/0:27,0:27:81.28:0,81,5122	0/0:24,0:24:69.24:0,69,3986	0/0:19,0:19:54.19:0,54,3388	1/1:8,20:28:59.94:1514,60,0	1/1:6,15:21:48.16:1845,48,0	0/0:34,0:34:99:0,99,6187	0/0:19,0:19:57.18:0,57,3184	0/0:24,0:24:69.24:0,69,4382	0/0:18,0:18:54.19:0,54,3484	0/0:20,0:20:57.18:0,57,3421	0/0:27,0:27:81.28:0,81,4813	0/0:26,0:26:78.25:0,78,4653	1/1:10,4:14:15.01:498,15,0	1/1:5,4:9:12.04:479,12,0	1/1:10,11:21:33.05:1027,33,0	1/1:11,12:23:39.13:1552,39,0	1/1:6,17:23:41.11:1506,41,0	0/0:23,0:23:63.22:0,63,3490	0/0:20,0:20:60.21:0,60,3714	0/0:16,0:16:48.16:0,48,2994	0/0:23,0:23:66.23:0,66,3939	1/1:3,11:14:33.11:1316,33,0	1/1:9,16:25:45.15:1795,45,0	1/1:0,3:3:9.03:359,9,0
chr10	110268838	.	CT	C	8373.02	PASS	AB=0.548;AC=21;AF=0.375;AN=56;BaseQRankSum=16.258;DP=685;FS=0.000;HRun=4;HaplotypeScore=130.5183;InbreedingCoeff=0.9241;MQ=85.58;MQ0=0;MQRankSum=-6.752;QD=28.48;ReadPosRankSum=5.020;VQSLOD=3.3206;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,41:45:93.28:1115,93,0	0/0:13,0:13:39.13:0,39,545	0/0:29,0:29:72.18:0,72,944	0/0:20,0:20:51.14:0,51,679	0/0:24,0:24:72.19:0,72,970	0/0:29,0:29:84.23:0,84,1136	0/0:17,0:17:51.17:0,51,714	1/1:0,25:25:75.21:887,75,0	1/1:0,20:20:48.15:576,48,0	0/0:24,0:24:69.20:0,69,895	0/0:16,0:16:48.15:0,48,654	0/0:23,0:23:69.23:0,69,965	0/0:18,0:18:51.17:0,51,714	0/0:23,0:23:66.22:0,66,923	0/0:37,0:37:99:0,108,1511	0/0:34,0:34:99:0,99,1387	1/1:0,29:29:78.24:935,78,0	1/1:2,15:17:45.14:540,45,0	1/1:0,23:23:69.20:818,69,0	1/1:2,19:21:42.13:504,42,0	1/1:2,44:46:93.28:1116,93,0	0/0:17,0:17:51.15:0,51,685	0/0:17,0:17:48.15:0,48,655	0/0:17,0:17:48.16:0,48,672	0/0:33,0:33:99:0,99,1351	0/1:4,19:23:23.87:588,0,24	1/1:5,23:28:57.17:683,57,0	1/1:0,17:17:51.16:612,51,0
chr10	110269382	.	GTT	G	929.78	PASS	AB=0.984;AC=20;AF=0.357;AN=56;BaseQRankSum=9.316;DP=576;FS=0.418;HRun=2;HaplotypeScore=225.0815;InbreedingCoeff=-0.0612;MQ=61.13;MQ0=14;MQRankSum=-7.003;QD=2.78;ReadPosRankSum=3.084;VQSLOD=-0.6398;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,1:22:33.39:33,0,154	0/0:12,0:12:36.12:0,36,675	0/0:43,0:12:5.66:0,6,235	0/0:56,0:25:8.08:0,8,285	0/1:21,0:21:18.78:52,0,19	0/1:21,0:19:5.95:131,0,6	0/1:15,0:13:7.86:19,0,8	0/1:29,1:27:25.02:73,0,25	0/1:11,0:10:4.56:5,0,80	0/0:22,0:22:66.20:0,66,1156	0/0:25,0:25:69.23:0,69,1258	1/1:24,0:20:29.31:200,29,0	1/1:19,0:19:5.32:113,5,0	0/1:18,0:15:11.64:69,0,12	0/1:26,0:22:3.58:129,0,4	0/0:22,0:22:58.96:0,59,1147	0/0:14,0:13:5.90:0,6,125	0/1:19,1:20:18.63:19,0,102	0/0:14,0:13:8.62:0,9,56	0/0:18,0:17:2.08:0,2,130	0/0:7,0:5:5.65:0,6,31	1/1:17,0:15:20.45:95,20,0	0/1:12,0:12:9.53:43,0,10	0/1:15,0:15:3.97:35,0,4	0/1:16,0:13:23.13:39,0,23	0/1:24,2:21:21.84:22,0,145	0/1:18,0:16:21.58:22,0,113	0/0:9,0:9:11.63:0,12,97
chr10	110269385	.	GTTTTTTTTT	G	5895.42	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=10.882;DP=575;FS=3.529;HRun=13;HaplotypeScore=267.9671;InbreedingCoeff=0.9281;MQ=59.94;MQ0=17;MQRankSum=-7.653;QD=30.08;ReadPosRankSum=6.408;VQSLOD=-0.0991;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:35.81:0,36,764	0/0:9,0:12:36.06:0,36,1059	0/0:44,0:12:2.91:0,3,297	0/0:52,0:23:45.82:0,46,372	1/1:11,10:21:34.75:514,35,0	1/1:10,11:17:30.19:799,30,0	1/1:11,4:13:23.49:294,23,0	0/0:29,0:26:43.83:0,44,505	0/0:11,0:10:24.01:0,24,522	0/0:18,0:19:54.10:0,54,1780	0/0:24,0:28:72.18:0,72,2746	1/1:7,16:19:33.73:930,34,0	1/1:10,9:19:30.35:681,30,0	1/1:9,9:15:8.12:473,8,0	1/1:11,14:21:59.09:921,59,0	0/0:23,0:24:66.16:0,66,2430	0/0:13,0:12:33:0,33,589	0/0:19,0:20:50.94:0,51,846	0/0:14,0:12:11.71:0,12,272	0/0:18,0:17:42.06:0,42,781	0/0:8,0:6:9.03:0,9,247	1/1:7,9:14:24.47:556,24,0	1/1:6,5:11:29.50:376,29,0	1/1:10,2:12:18.58:147,19,0	1/1:11,4:12:4:204,4,0	0/0:29,0:23:60.08:0,60,1213	0/0:19,0:18:45.11:0,45,860	0/0:12,0:12:33.07:0,33,835
chr10	110269389	.	T	TG	3874.19	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=10.335;DP=578;FS=2.810;HRun=0;HaplotypeScore=209.6462;InbreedingCoeff=0.9613;MQ=59.16;MQ0=17;MQRankSum=-8.956;QD=20.50;ReadPosRankSum=6.515;VQSLOD=3.5567;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,1:19:3.32:0,3,218	0/0:12,0:12:29.66:0,30,352	0/0:46,0:13:24.84:0,25,251	0/0:56,0:23:39.48:0,39,324	1/1:15,6:21:43.41:377,43,0	1/1:15,7:17:50.96:471,51,0	1/1:9,4:11:29.93:275,30,0	0/0:29,0:26:43.19:0,43,287	0/0:11,0:10:25.62:0,26,180	0/0:21,0:20:57.12:0,57,726	0/0:28,0:28:71.62:0,72,863	1/1:17,5:18:53.93:477,54,0	1/1:11,7:18:53.82:482,54,0	1/1:9,9:15:41.93:410,42,0	1/1:18,6:20:59.36:463,59,0	0/0:24,0:24:66.83:0,67,768	0/0:13,0:12:32.66:0,33,239	0/0:21,0:21:43.61:0,44,373	0/0:16,0:14:13.52:0,14,127	0/0:17,0:16:35.19:0,35,252	0/0:8,0:5:7.97:0,8,48	1/1:13,2:13:36.05:291,36,0	1/1:9,3:12:29.11:232,29,0	1/1:4,8:12:20.77:175,21,0	1/1:7,5:9:23.67:219,24,0	0/0:31,0:25:46.72:0,47,328	0/0:22,0:19:42.39:0,42,318	0/0:12,0:12:34.24:0,34,217
chr10	110269395	.	TTTTG	T	4593.61	PASS	AB=0.916;AC=33;AF=0.589;AN=56;BaseQRankSum=9.031;DP=563;FS=3.591;HRun=0;HaplotypeScore=213.8181;InbreedingCoeff=0.2735;MQ=54.65;MQ0=18;MQRankSum=-10.570;QD=12.52;ReadPosRankSum=2.130;VQSLOD=4.5887;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,3:22:99:133,0,142	0/0:12,0:12:31.19:0,31,469	0/0:48,0:10:10.88:0,11,116	0/0:56,0:22:12.49:0,12,192	1/1:17,0:17:36.46:308,36,0	1/1:21,0:16:42.96:408,43,0	1/1:9,0:7:18.79:124,19,0	1/1:23,3:23:2.68:331,3,0	0/1:11,1:11:61.21:61,0,88	0/0:21,0:19:54.07:0,54,953	0/0:28,0:28:75.07:0,75,1378	1/1:22,0:18:52.70:543,53,0	1/1:17,0:17:42.83:434,43,0	1/1:17,0:14:29.65:319,30,0	1/1:21,0:17:32.30:410,32,0	0/0:22,0:22:40.04:0,40,1114	0/1:11,2:12:30.50:31,0,38	0/1:15,3:18:49.57:196,0,50	0/1:20,0:17:46.70:101,0,47	0/1:16,2:17:99:196,0,114	0/0:9,0:5:6.52:0,7,31	1/1:14,0:12:32.69:317,33,0	1/1:11,0:11:20.96:159,21,0	1/1:10,0:10:7.03:54,7,0	1/1:11,0:8:15.22:132,15,0	0/1:31,1:26:99:131,0,156	0/1:20,2:18:82.82:145,0,83	0/1:10,1:11:61.71:62,0,88
chr10	110269396	.	TTTG	T	4747	PASS	AB=0.978;AC=34;AF=0.607;AN=56;BaseQRankSum=8.901;DP=562;FS=8.388;HRun=0;HaplotypeScore=205.8269;InbreedingCoeff=0.2559;MQ=53.70;MQ0=18;MQRankSum=-10.094;QD=11.20;ReadPosRankSum=1.468;VQSLOD=3.3688;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:22:72.42:139,0,72	0/0:12,0:12:31.12:0,31,381	0/0:47,0:10:9.17:0,9,89	0/1:56,0:22:4.91:5,0,201	1/1:17,0:17:36.40:338,36,0	1/1:21,0:16:45.39:432,45,0	1/1:9,0:7:20.80:174,21,0	1/1:26,0:23:24.20:295,24,0	0/1:11,1:11:29.23:60,0,29	0/0:20,0:18:54.08:0,54,781	0/0:28,0:28:74.72:0,75,1083	1/1:22,0:18:53.97:557,54,0	1/1:17,0:17:42.97:460,43,0	1/1:17,0:14:32.16:364,32,0	1/1:21,0:17:33.79:389,34,0	0/0:22,0:22:40.14:0,40,876	0/1:14,0:13:23.13:23,0,39	0/1:18,0:18:14.94:169,0,15	0/1:20,0:17:1.06:108,0,1	0/1:18,0:17:51.30:136,0,51	0/0:9,0:5:4.47:0,4,15	1/1:14,0:12:32.32:338,32,0	1/1:11,0:11:22.34:172,22,0	1/1:10,0:10:6.39:49,6,0	1/1:11,0:8:16.96:154,17,0	0/1:30,2:26:39.51:175,0,40	0/1:20,2:18:50.49:172,0,50	0/1:11,0:11:34.80:38,0,35
chr10	110269400	.	T	TTTG	2004.64	PASS	AB=0.986;AC=20;AF=0.357;AN=56;BaseQRankSum=-2.026;DP=576;FS=33.939;HRun=0;HaplotypeScore=230.9530;InbreedingCoeff=0.0854;MQ=48.53;MQ0=20;MQRankSum=-3.260;QD=7.06;ReadPosRankSum=-6.234;VQSLOD=0.3914;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:22:23.52:160,0,24	0/0:9,0:9:24.08:0,24,402	0/0:45,0:9:13.05:0,13,140	0/0:51,0:19:0.31:0,0,230	0/1:23,0:23:46.93:47,0,107	0/0:26,0:21:8.16:0,8,252	0/0:11,0:9:22.21:0,22,112	1/1:10,11:18:35.67:322,36,0	0/1:12,0:11:34.43:92,0,34	0/0:21,0:19:51.15:0,51,797	0/0:29,0:29:81.14:0,81,1300	0/0:24,0:20:13.65:0,14,277	0/0:17,0:16:33.29:0,33,206	0/0:16,0:13:36.06:0,36,228	0/0:21,0:17:25.28:0,25,257	0/0:21,0:21:57.19:0,57,925	0/1:12,0:12:43.71:85,0,44	0/1:18,0:18:46.73:125,0,47	0/1:23,0:19:4.16:210,0,4	1/1:17,0:18:5.88:231,6,0	0/1:9,0:5:3.68:42,0,4	0/1:14,0:12:14.81:15,0,95	0/1:13,0:13:19.97:20,0,70	0/1:16,0:16:15.92:44,0,16	0/1:10,0:7:2.86:3,0,67	1/1:32,1:27:21.76:402,22,0	0/1:22,0:18:94.12:114,0,94	1/1:8,1:11:29.06:267,29,0
chr10	110269403	.	T	TG	2980.27	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=12.867;DP=591;FS=1.267;HRun=0;HaplotypeScore=216.3604;InbreedingCoeff=0.9837;MQ=46.50;MQ0=20;MQRankSum=-9.703;QD=14.83;ReadPosRankSum=3.414;VQSLOD=4.6402;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:23:37.41:0,37,248	0/0:8,0:8:24.08:0,24,330	0/0:42,0:8:10.19:0,10,126	0/0:49,0:18:22.91:0,23,217	1/1:12,15:27:59.08:436,59,0	1/1:10,15:20:59.48:448,59,0	1/1:7,4:9:25.72:154,26,0	0/0:25,0:22:31.71:0,32,225	0/0:12,0:11:28.76:0,29,171	0/0:20,0:18:54.16:0,54,701	0/0:30,0:30:84.22:0,84,1129	1/1:9,17:23:65.28:475,65,0	1/1:6,11:16:44.49:315,44,0	1/1:8,9:14:41.51:287,42,0	1/1:7,16:19:47.26:346,47,0	0/0:22,0:22:63.03:0,63,780	0/0:13,0:12:30.05:0,30,172	0/0:19,0:19:24.18:0,24,157	0/0:24,0:20:51.58:0,52,352	0/0:19,0:18:28.67:0,29,216	0/0:11,0:6:11.87:0,12,87	1/1:8,9:15:35.88:307,36,0	1/1:6,8:14:29.36:191,29,0	1/1:6,8:14:15.19:119,15,0	1/1:5,4:6:17.76:127,18,0	0/0:34,0:28:54.78:0,55,346	0/0:24,0:20:44.17:0,44,265	0/0:11,0:11:27.27:0,27,152
chr10	110269409	.	TTTTTTTG	T	7778.09	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=11.078;DP=590;FS=2.265;HRun=0;HaplotypeScore=254.7721;InbreedingCoeff=0.9216;MQ=44.91;MQ0=18;MQRankSum=-8.552;QD=32.14;ReadPosRankSum=4.746;VQSLOD=4.3541;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:25:57.84:0,58,942	0/0:8,0:8:24.08:0,24,771	0/0:33,0:8:17.61:0,18,341	0/1:34,0:14:12.52:13,0,217	1/1:19,10:29:57.65:863,58,0	1/1:14,11:20:47.22:1000,47,0	1/1:9,4:11:27.09:403,27,0	0/0:27,0:24:59.60:0,60,768	0/0:13,0:12:32.90:0,33,655	0/0:18,0:16:45.15:0,45,1527	0/0:29,0:29:78.25:0,78,2635	1/1:10,17:23:58.53:1207,59,0	1/1:9,9:17:34.88:777,35,0	1/1:7,9:13:25.31:567,25,0	1/1:9,14:19:54.18:1083,54,0	0/0:26,0:26:75.26:0,75,2388	0/0:15,0:14:38.67:0,39,477	0/0:18,0:18:41.19:0,41,682	0/0:24,0:19:45.55:0,46,698	0/0:23,0:22:60.61:0,61,902	0/0:11,0:6:12.04:0,12,227	1/1:10,9:17:37.92:711,38,0	1/1:8,5:13:35.69:533,36,0	1/1:13,2:15:20.22:299,20,0	1/1:6,4:7:17.17:322,17,0	0/0:34,0:28:65.08:0,65,1219	0/0:28,0:24:50.06:0,50,732	0/0:11,0:11:33.10:0,33,859
chr10	110269411	.	T	TTG	2823.01	PASS	AB=0.971;AC=23;AF=0.411;AN=56;BaseQRankSum=9.280;DP=595;FS=0.000;HRun=0;HaplotypeScore=233.8410;InbreedingCoeff=0.9018;MQ=45.36;MQ0=17;MQRankSum=-8.528;QD=11.25;ReadPosRankSum=-0.609;VQSLOD=3.0753;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:24:59.55:0,60,626	0/0:8,0:8:24.08:0,24,365	0/0:29,1:7:17.95:0,18,207	0/1:33,0:14:44.29:44,0,127	1/1:30,1:31:26.65:429,27,0	1/1:26,0:21:30.25:305,30,0	1/1:13,0:11:25.70:271,26,0	0/0:27,0:24:61.42:0,61,677	0/0:13,0:12:32.61:0,33,375	0/0:18,0:16:45.15:0,45,688	0/0:30,0:30:81.25:0,81,1181	1/1:26,2:24:37.60:346,38,0	1/1:18,0:17:22.49:230,22,0	1/1:15,1:13:8.81:153,9,0	1/1:23,0:19:25.35:257,25,0	0/0:26,0:26:75.24:0,75,1094	0/0:15,0:14:37.87:0,38,359	0/0:18,0:18:41.86:0,42,448	0/0:23,0:18:50.69:0,51,634	0/0:23,0:22:61.13:0,61,637	0/0:11,0:6:11.84:0,12,126	1/1:19,1:18:38.20:381,38,0	1/1:14,1:15:29.24:325,29,0	1/1:15,1:16:16.33:203,16,0	1/1:11,0:7:10.02:102,10,0	0/0:33,0:28:56.55:0,57,787	0/0:29,0:25:57.34:0,57,563	0/0:11,0:11:33.06:0,33,434
chr10	110269412	.	T	TGC	1882.29	PASS	AB=0.958;AC=16;AF=0.286;AN=56;BaseQRankSum=7.305;DP=565;FS=4.408;HRun=0;HaplotypeScore=221.8671;InbreedingCoeff=0.2258;MQ=46.37;MQ0=16;MQRankSum=-7.305;QD=8.33;ReadPosRankSum=0.341;VQSLOD=3.1495;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:23:60.07:0,60,828	0/0:8,0:8:24.08:0,24,392	0/0:26,0:7:17.97:0,18,243	0/1:33,0:14:57.13:57,0,173	0/1:25,0:25:46.82:241,0,47	0/1:22,1:19:31.39:217,0,31	1/1:9,3:10:18.37:277,18,0	0/0:27,0:24:61.68:0,62,823	0/0:13,0:12:33.11:0,33,483	0/0:18,0:16:45.15:0,45,735	0/0:30,0:30:81.27:0,81,1294	0/1:23,2:21:82.46:249,0,82	0/1:14,1:14:66.94:110,0,67	0/1:11,1:10:46.08:94,0,46	0/1:21,2:20:91.98:133,0,92	0/0:27,0:27:75.26:0,75,1218	0/0:15,0:14:39.05:0,39,533	0/0:18,0:18:42.14:0,42,609	0/0:22,0:17:51.15:0,51,743	0/0:23,0:22:61.60:0,62,855	0/0:11,0:6:12.02:0,12,153	1/1:18,0:16:7.91:291,8,0	1/1:13,2:15:29.49:288,29,0	1/1:13,2:15:0.84:83,1,0	0/1:10,0:6:16.41:16,0,28	0/0:32,0:28:72.07:0,72,1020	0/0:28,0:24:61.61:0,62,798	0/0:11,0:11:33.11:0,33,509
chr10	110269414	.	TTG	T	5027.10	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=11.387;DP=559;FS=0.382;HRun=0;HaplotypeScore=207.6508;InbreedingCoeff=0.9092;MQ=47.19;MQ0=15;MQRankSum=-8.692;QD=22.24;ReadPosRankSum=4.339;VQSLOD=5.1297;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:23:36.89:0,37,628	0/0:8,0:8:24.05:0,24,363	0/0:29,0:10:17.89:0,18,260	0/1:30,0:13:67.35:67,0,104	1/1:11,16:27:62.90:695,63,0	1/1:15,7:18:48.10:573,48,0	1/1:7,4:10:26.31:254,26,0	0/0:26,0:23:41.33:0,41,579	0/0:12,0:11:28.57:0,29,378	0/0:18,0:16:48.09:0,48,747	0/0:29,0:29:75.20:0,75,1215	1/1:21,4:21:59.85:709,60,0	1/1:13,3:15:41.98:478,42,0	1/1:12,0:10:29.97:327,30,0	1/1:16,7:20:53.84:650,54,0	0/0:26,0:26:78.24:0,78,1250	0/0:14,0:13:37.58:0,38,376	0/0:17,0:17:40.37:0,40,412	0/0:23,0:18:32.48:0,32,511	0/0:23,0:22:49.73:0,50,593	0/0:11,0:6:6.61:0,7,110	1/1:12,5:16:39.03:452,39,0	1/1:9,6:15:35.51:364,36,0	1/1:12,6:18:21.43:246,21,0	1/1:10,0:6:18.04:212,18,0	0/0:32,0:27:22.94:0,23,550	0/0:27,0:23:44.26:0,44,524	0/0:11,0:11:30.55:0,31,428
chr10	110269415	.	TG	T	2145.33	PASS	AB=0.952;AC=25;AF=0.446;AN=56;BaseQRankSum=12.656;DP=550;FS=2.799;HRun=1;HaplotypeScore=206.9165;InbreedingCoeff=0.7747;MQ=47.54;MQ0=14;MQRankSum=-10.742;QD=8.07;ReadPosRankSum=4.374;VQSLOD=1.2748;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:23:15.22:0,15,405	0/0:8,0:8:24.05:0,24,299	0/0:27,1:9:17.30:0,17,211	0/1:25,4:13:64.94:65,0,77	1/1:27,0:27:61.36:369,61,0	1/1:22,0:18:46.26:255,46,0	1/1:11,0:10:21.67:107,22,0	0/0:24,0:21:19.56:0,20,426	0/0:12,0:11:23.50:0,23,223	0/0:18,0:16:47.41:0,47,571	0/0:29,0:29:74.56:0,75,957	1/1:25,0:21:55.42:306,55,0	1/1:16,0:15:40.30:216,40,0	1/1:12,0:10:28.73:154,29,0	1/1:23,0:20:50.10:281,50,0	0/0:26,0:26:77.59:0,78,960	0/0:14,0:13:24.04:0,24,204	0/0:17,0:17:34.52:0,35,283	0/0:23,0:19:12.96:0,13,357	0/0:20,1:20:14.77:0,15,391	0/1:11,0:6:10.90:11,0,73	1/1:16,0:16:37.84:222,38,0	1/1:14,0:14:26.35:149,26,0	1/1:18,0:18:20.36:126,20,0	1/1:9,0:6:15.31:85,15,0	0/1:32,0:27:20.86:21,0,322	0/0:26,0:22:36.65:0,37,359	0/0:11,0:11:26.67:0,27,274
chr10	110269416	.	G	GT	2871.58	PASS	AB=0.965;AC=24;AF=0.429;AN=56;BaseQRankSum=11.325;DP=551;FS=4.329;HRun=7;HaplotypeScore=206.0391;InbreedingCoeff=0.8263;MQ=47.71;MQ0=13;MQRankSum=-9.855;QD=11.44;ReadPosRankSum=2.801;VQSLOD=0.9922;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:24:32.77:0,33,224	0/0:8,0:8:18.06:0,18,216	0/0:28,0:9:20.70:0,21,212	0/1:29,0:13:10.98:11,0,63	1/1:26,1:27:61.94:541,62,0	1/1:22,0:18:45.33:326,45,0	1/1:11,0:10:19.78:137,20,0	0/0:24,0:21:26.48:0,26,143	0/0:12,0:11:23.06:0,23,140	0/0:19,0:17:45.03:0,45,495	0/0:28,0:28:75.18:0,75,846	1/1:23,2:21:55.60:357,56,0	1/1:13,3:15:38.86:264,39,0	1/1:12,1:11:26.79:177,27,0	1/1:24,0:21:50.18:351,50,0	0/0:26,0:26:73.13:0,73,792	0/0:14,0:13:25.67:0,26,121	0/0:17,0:17:20.68:0,21,124	0/0:22,0:19:30.20:0,30,185	0/0:20,0:19:33.59:0,34,217	0/0:10,0:6:4.83:0,5,28	1/1:15,1:16:37.36:291,37,0	1/1:14,0:14:27.92:221,28,0	1/1:11,7:18:21.66:212,22,0	1/1:5,5:7:17.82:194,18,0	0/0:32,0:27:4.05:0,4,157	0/1:24,1:21:7.54:8,0,144	0/0:11,0:11:27.78:0,28,170
chr10	110269968	.	TG	T	13077.92	PASS	AB=0.524;AC=43;AF=0.768;AN=56;BaseQRankSum=8.108;DP=593;FS=34.294;HRun=5;HaplotypeScore=79.0150;InbreedingCoeff=0.8939;MQ=72.72;MQ0=2;MQRankSum=-3.490;QD=28.12;ReadPosRankSum=6.181;VQSLOD=2.6513;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,45:49:99:1292,114,0	0/0:5,0:5:15.04:0,15,186	0/0:29,0:28:60.75:0,61,866	0/0:25,0:24:68.31:0,68,813	1/1:1,20:21:60.06:662,60,0	1/1:1,16:17:48.14:545,48,0	1/1:2,37:39:90.21:1004,90,0	1/1:0,17:15:45.07:480,45,0	1/1:1,21:22:48.14:545,48,0	0/0:16,0:16:45.15:0,45,616	0/0:25,0:25:63.19:0,63,831	1/1:2,29:31:81.23:918,81,0	1/1:2,11:13:30.08:341,30,0	1/1:1,13:14:39.11:442,39,0	1/1:1,22:23:57.16:646,57,0	0/0:28,0:28:84.28:0,84,1142	1/1:2,31:32:78.22:884,78,0	1/1:0,28:28:75.17:836,75,0	1/1:2,8:9:24.07:272,24,0	1/1:1,15:16:44.97:465,45,0	1/1:4,22:26:69.13:763,69,0	0/1:1,10:11:10.95:277,0,11	1/1:1,11:12:30.08:340,30,0	1/1:0,21:21:57.16:646,57,0	1/1:1,17:18:45.13:510,45,0	1/1:2,16:18:10.10:494,10,0	1/1:0,18:18:42.12:476,42,0	1/1:0,8:8:21.06:238,21,0
chr10	110270055	.	T	TTTTTTTTTG	4976.94	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=1.474;DP=427;FS=31.782;HRun=0;HaplotypeScore=106.7751;InbreedingCoeff=0.2959;MQ=39.61;MQ0=20;MQRankSum=-3.598;QD=15.08;ReadPosRankSum=0.264;VQSLOD=1.7577;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:24:27.95:296,28,0	0/0:6,0:6:3.77:0,4,266	0/0:25,0:5:7.76:0,8,155	0/1:24,0:12:17.22:17,0,121	1/1:1,15:24:6.02:176,6,0	1/1:18,0:16:16.24:436,16,0	1/1:10,0:9:20.89:299,21,0	0/1:29,0:25:52.02:384,0,52	0/1:14,0:13:9.04:199,0,9	0/0:20,0:18:19.39:0,19,652	0/0:22,0:21:38.08:0,38,504	1/1:15,0:16:38.86:533,39,0	1/1:9,0:8:20.54:166,21,0	1/1:7,0:7:20.49:185,20,0	1/1:19,0:14:38.62:430,39,0	0/0:19,0:18:22.30:0,22,556	0/1:15,0:13:35.56:137,0,36	0/1:7,0:6:6.87:86,0,7	1/1:9,0:6:17.78:204,18,0	1/1:12,0:9:8.45:72,8,0	0/0:4,0:2:2.94:0,3,18	1/1:10,0:9:20.29:177,20,0	1/1:8,0:8:14.91:239,15,0	1/1:5,0:5:5.92:39,6,0	1/1:21,0:20:33.09:593,33,0	0/1:13,0:12:35.35:141,0,35	0/1:14,0:12:6.14:122,0,6	0/1:9,0:6:19.14:45,0,19
chr10	110270222	.	A	ATATT	22808.89	PASS	AB=0.947;AC=45;AF=0.804;AN=56;BaseQRankSum=-9.692;DP=464;FS=13.690;HRun=0;HaplotypeScore=69.8136;InbreedingCoeff=0.8813;MQ=80.82;MQ0=0;MQRankSum=-6.942;QD=60.02;ReadPosRankSum=2.400;VQSLOD=5.8233;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:33:84.20:2082,84,0	0/0:8,0:8:24.07:0,24,407	0/0:17,0:17:39.13:0,39,680	0/0:13,0:13:30.05:0,30,470	1/1:3,23:26:71.97:1643,72,0	1/1:2,18:20:54.19:1412,54,0	1/1:2,8:10:27.09:699,27,0	1/1:8,12:21:42.09:931,42,0	1/1:1,12:13:36.08:883,36,0	0/0:24,0:24:72.24:0,72,1281	0/0:22,0:22:63.20:0,63,1116	1/1:1,11:12:30.10:783,30,0	1/1:3,5:8:17.97:349,18,0	1/1:3,10:14:39.13:958,39,0	1/1:1,16:18:51.18:1331,51,0	0/1:17,1:18:27.19:27,0,816	1/1:1,18:19:48.16:1256,48,0	1/1:3,15:17:42.10:1032,42,0	1/1:5,5:10:27.07:630,27,0	1/1:4,11:15:39.01:846,39,0	1/1:0,14:14:36.08:884,36,0	1/1:4,7:11:24.04:570,24,0	1/1:5,11:16:38.92:894,39,0	1/1:1,7:8:17.80:471,18,0	1/1:2,24:26:69.24:1806,69,0	1/1:1,20:22:66.21:1645,66,0	1/1:5,13:19:48.08:1126,48,0	1/1:2,7:9:21.07:550,21,0
chr10	110270304	.	T	TACA	10094.96	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-15.603;DP=556;FS=8.440;HRun=0;HaplotypeScore=122.9890;InbreedingCoeff=0.9966;MQ=80.22;MQ0=0;MQRankSum=-2.466;QD=54.27;ReadPosRankSum=2.640;VQSLOD=7.0855;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,1819	0/0:7,0:7:21.07:0,21,343	0/0:21,0:21:48.16:0,48,761	0/0:12,0:12:24.07:0,24,371	1/1:8,12:19:39.13:780,39,0	1/1:5,11:16:41.35:859,41,0	1/1:2,14:16:39.13:861,39,0	0/0:28,0:28:66.13:0,66,1026	0/0:12,0:12:36.12:0,36,574	0/0:26,0:26:66.20:0,66,1049	0/0:17,0:17:48.16:0,48,784	1/1:3,11:15:42.14:909,42,0	1/1:2,8:11:27.09:586,27,0	1/1:0,17:19:51.18:1136,51,0	1/1:5,12:17:48.15:982,48,0	0/0:22,0:22:63.22:0,63,1029	0/0:23,0:23:53.84:0,54,861	0/0:26,0:26:71.93:0,72,1085	0/0:17,0:17:51.15:0,51,759	0/0:16,0:16:45.15:0,45,696	0/0:46,0:46:99:0,119,1754	1/1:1,12:13:36.12:804,36,0	1/1:2,10:12:30.10:648,30,0	1/1:3,17:20:48.16:1039,48,0	1/1:7,20:27:75.18:1493,75,0	0/0:24,0:24:69.19:0,69,1065	0/0:24,0:23:60.20:0,60,957	0/0:5,0:5:15.05:0,15,239
chr10	110270425	.	T	TA	5473.51	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-8.994;DP=507;FS=3.820;HRun=6;HaplotypeScore=52.9267;InbreedingCoeff=0.9893;MQ=73.41;MQ0=0;MQRankSum=-1.579;QD=29.43;ReadPosRankSum=2.281;VQSLOD=5.5930;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,111,1117	0/0:6,0:6:18.04:0,18,183	0/0:9,0:9:14.24:0,14,125	0/0:13,0:12:11.40:0,11,155	1/1:3,8:11:21.54:265,22,0	1/1:2,17:19:42.13:528,42,0	1/1:4,25:29:51.16:642,51,0	0/0:24,0:24:69.15:0,69,704	0/0:15,0:15:39.09:0,39,398	0/0:18,0:18:51.10:0,51,508	0/0:12,0:12:30.04:0,30,298	1/1:1,21:22:56.97:716,57,0	1/1:1,10:11:30.10:377,30,0	1/1:0,22:22:54.17:679,54,0	1/1:2,12:14:36.12:453,36,0	0/0:16,0:16:48.11:0,48,489	0/0:22,0:22:66.15:0,66,673	0/0:23,0:23:66.15:0,66,673	0/0:17,0:17:48.11:0,48,489	0/0:12,0:12:21.04:0,21,214	0/0:41,0:41:99:0,102,1030	1/1:0,11:11:27.97:341,28,0	1/1:0,9:9:24.08:302,24,0	1/1:1,16:17:45.14:566,45,0	1/1:1,20:20:48.15:604,48,0	0/0:24,0:24:63.13:0,63,637	0/0:16,0:16:48.11:0,48,488	0/0:10,0:10:30.07:0,30,305
chr10	110270764	.	CA	C	9980.68	PASS	AB=0.522;AC=21;AF=0.375;AN=56;BaseQRankSum=12.058;DP=720;FS=3.651;HRun=2;HaplotypeScore=114.3480;InbreedingCoeff=0.9199;MQ=88.17;MQ0=0;MQRankSum=-2.773;QD=33.83;ReadPosRankSum=1.628;VQSLOD=4.5924;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,51:52:99:1710,132,0	0/0:7,0:7:21.06:0,21,295	0/0:32,0:32:80.87:0,81,1029	0/0:22,0:22:29:0,29,715	0/0:23,0:23:69.16:0,69,966	0/0:22,0:21:66.19:0,66,929	0/0:24,0:24:72.21:0,72,1020	1/1:1,37:38:99:1326,111,0	1/1:0,25:26:63.20:817,63,0	0/0:34,0:34:99:0,99,1409	0/0:23,0:23:66.22:0,66,987	0/0:28,0:28:81.24:0,81,1170	0/0:37,0:37:99:0,111,1579	0/0:24,0:24:72.19:0,72,990	0/0:31,0:31:93.28:0,93,1333	0/0:29,0:29:87.27:0,87,1264	1/1:0,25:25:72.23:934,72,0	1/1:0,25:25:75.24:971,75,0	1/1:0,23:23:66.15:795,66,0	1/1:0,22:22:66.10:815,66,0	1/1:1,22:23:57.19:739,57,0	0/0:23,0:23:69.23:0,69,1014	0/0:14,0:14:42.14:0,42,627	0/0:34,0:34:99:0,102,1507	0/0:18,0:18:51.17:0,51,763	0/1:2,22:24:17.62:784,0,18	1/1:0,31:31:72.23:934,72,0	1/1:0,6:6:12.04:156,12,0
chr10	110271280	.	CAGCACAGAG	C	9856.16	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=4.975;DP=572;FS=58.902;HRun=0;HaplotypeScore=230.7991;InbreedingCoeff=0.9928;MQ=86.31;MQ0=0;MQRankSum=-15.937;QD=63.18;ReadPosRankSum=2.985;VQSLOD=2.6082;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.27:0,78,2840	0/0:13,0:13:39.13:0,39,1821	0/0:24,0:24:63.67:0,64,2669	0/0:26,0:26:76.50:0,77,3344	1/1:4,13:17:30.06:847,30,0	1/1:2,15:17:39.13:1194,39,0	1/1:5,15:20:39.13:1032,39,0	0/0:34,0:34:99:0,102,3797	0/0:26,0:26:75.21:0,75,2585	0/0:15,0:15:45.15:0,45,2018	0/0:13,0:13:33.11:0,33,1505	1/1:1,12:13:30.10:918,30,0	1/1:1,4:5:12.04:367,12,0	1/1:1,9:10:27.09:827,27,0	1/1:1,16:17:42.14:1233,42,0	0/0:32,0:32:93.29:0,93,3879	0/0:34,0:34:93.31:0,93,3387	0/0:17,0:17:48.13:0,48,1774	0/0:20,0:20:57.20:0,57,2059	0/0:19,0:19:57.20:0,57,2130	0/0:41,0:41:99:0,117,4291	1/1:1,9:10:27.09:826,27,0	1/1:2,8:11:21.07:642,21,0	1/1:3,13:16:16.30:408,16,0	1/1:3,17:20:51.18:1561,51,0	0/0:18,0:18:51.18:0,51,1838	0/0:39,0:39:99:0,102,3846	0/0:17,0:17:51.14:0,51,1828
chr10	110271580	.	T	TCAGCCGTAGC	23536.06	PASS	AB=0.846;AC=22;AF=0.393;AN=56;BaseQRankSum=-12.558;DP=612;FS=20.660;HRun=0;HaplotypeScore=191.1666;InbreedingCoeff=0.8498;MQ=87.34;MQ0=0;MQRankSum=-15.318;QD=82.87;ReadPosRankSum=-1.680;VQSLOD=3.1652;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,11:32:48.16:2319,48,0	0/0:11,0:11:33.10:0,33,1010	0/0:27,0:27:71:0,71,1875	0/0:27,0:27:66.18:0,66,1886	0/0:19,0:19:51.17:0,51,1576	0/0:13,0:13:36.12:0,36,1186	0/0:28,0:28:81.26:0,81,2464	1/1:17,4:27:69.22:2649,69,0	1/1:6,13:19:57.20:2843,57,0	0/0:26,0:26:75.26:0,75,2380	0/0:20,0:20:57.15:0,57,1510	0/0:17,0:17:45.15:0,45,1451	0/0:17,0:17:48.14:0,48,1434	0/0:16,0:16:48.16:0,48,1527	0/0:36,0:36:99:0,102,3094	0/1:31,1:32:61.92:62,0,2723	1/1:10,7:19:33.11:1740,33,0	1/1:6,11:18:42.14:2035,42,0	1/1:16,8:26:66.12:2955,66,0	1/1:6,6:19:36.04:1295,36,0	1/1:18,6:37:39:1632,39,0	0/0:13,0:13:36.12:0,36,1164	0/0:19,0:19:51.17:0,51,1564	0/0:18,0:18:45.15:0,45,1483	0/0:21,0:21:57.19:0,57,1736	0/1:16,9:26:38.70:2545,0,39	1/1:4,12:21:42.03:2195,42,0	1/1:3,5:8:24.08:1268,24,0
chr10	110271583	.	G	GCC	2269.37	PASS	AB=0.978;AC=16;AF=0.286;AN=56;BaseQRankSum=15.776;DP=542;FS=14.740;HRun=0;HaplotypeScore=155.2771;InbreedingCoeff=0.4474;MQ=91.29;MQ0=0;MQRankSum=-15.151;QD=13.12;ReadPosRankSum=3.416;VQSLOD=2.9653;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:99:304,0,110	0/0:11,0:11:33.11:0,33,538	0/0:29,0:29:78.27:0,78,1271	0/0:24,0:24:66.22:0,66,1046	0/0:19,0:19:54.18:0,54,880	0/0:14,0:14:42.14:0,42,680	0/0:29,0:29:84.28:0,84,1344	0/1:15,0:15:99:109,0,134	1/1:16,0:16:8.85:308,9,0	0/0:28,0:28:75.26:0,75,1224	0/0:20,0:20:57.14:0,57,816	0/0:18,0:18:48.16:0,48,781	0/0:17,0:17:51.16:0,51,804	0/0:19,0:19:54.17:0,54,853	0/0:34,0:34:99:0,102,1663	0/0:33,0:33:74.79:0,75,1515	1/1:13,0:13:23.93:191,24,0	1/1:13,0:13:7.35:241,7,0	0/1:19,1:20:96.71:250,0,97	0/1:8,0:8:16.17:135,0,16	1/1:21,1:22:26.16:241,26,0	0/0:15,0:15:45.13:0,45,686	0/0:18,0:18:51.17:0,51,828	0/0:19,0:19:48.16:0,48,783	0/0:22,0:22:63.21:0,63,1000	0/1:19,2:21:99:262,0,198	1/1:16,0:16:38.92:315,39,0	0/1:8,0:8:99:99,0,113
chr10	110271585	.	T	TAGCCAGGG	9325.14	PASS	AB=0.978;AC=18;AF=0.321;AN=56;BaseQRankSum=16.123;DP=557;FS=18.210;HRun=0;HaplotypeScore=194.2566;InbreedingCoeff=0.6523;MQ=93.40;MQ0=0;MQRankSum=-15.151;QD=51.52;ReadPosRankSum=2.190;VQSLOD=3.2942;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:35.82:958,0,36	0/0:11,0:11:33.11:0,33,938	0/0:32,0:32:90.25:0,90,2068	0/0:26,0:26:69.22:0,69,1836	0/0:20,0:20:54.17:0,54,1505	0/0:15,0:15:42.11:0,42,1138	0/0:30,0:30:84.26:0,84,2301	1/1:17,0:17:14.17:718,14,0	1/1:17,0:17:1.20:1110,1,0	0/0:27,0:27:81.24:0,81,2264	0/0:16,0:16:45.14:0,45,1272	0/0:18,0:18:51.15:0,51,1360	0/0:16,0:16:48.15:0,48,1344	0/0:20,0:20:57.13:0,57,1496	0/0:34,0:34:99:0,102,2934	0/0:33,0:33:19.51:0,20,2541	1/1:14,0:14:7.09:602,7,0	1/1:13,0:13:15.15:867,15,0	1/1:20,1:21:13.01:998,13,0	0/1:9,0:9:0.03:523,0,0	1/1:23,1:24:36.12:976,36,0	0/0:15,0:15:45.11:0,45,1163	0/0:20,0:20:48.16:0,48,1417	0/0:22,0:22:63.12:0,63,1499	0/0:21,0:21:60.18:0,60,1638	0/1:19,2:21:82.72:1182,0,83	1/1:16,0:16:39.13:1022,39,0	0/1:8,0:8:48.92:370,0,49
chr10	110271815	.	GTGA	G	7721.57	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.420;DP=634;FS=9.698;HRun=0;HaplotypeScore=121.9165;InbreedingCoeff=0.9829;MQ=72.40;MQ0=0;MQRankSum=-7.372;QD=27.00;ReadPosRankSum=2.327;VQSLOD=4.6806;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,40:41:84.15:1191,84,0	0/0:7,0:7:21.04:0,21,364	0/0:14,0:14:27.04:0,27,504	0/0:22,0:22:51.17:0,51,1007	0/0:13,0:13:33.10:0,33,653	0/0:11,0:11:27.09:0,27,552	0/0:33,0:33:81.28:0,81,1622	1/1:12,19:32:54.12:740,54,0	1/1:1,31:32:81.27:1202,81,0	0/0:21,0:21:42.14:0,42,872	0/0:10,0:10:27.07:0,27,507	0/0:34,0:34:87.30:0,87,1786	0/0:19,0:19:23.19:0,23,861	0/0:23,0:23:54.19:0,54,1113	0/0:35,0:35:99:0,99,1988	0/0:29,1:30:30.43:0,30,1406	1/1:6,19:25:39.13:574,39,0	1/1:4,17:21:45.15:664,45,0	1/1:3,15:18:42.08:531,42,0	1/1:1,17:18:38.88:515,39,0	1/1:10,42:52:57.06:827,57,0	0/0:9,0:9:24.08:0,24,471	0/0:9,0:9:24.08:0,24,503	0/0:41,0:41:99:0,108,2217	0/0:17,0:17:48.15:0,48,965	1/1:2,22:24:57.18:829,57,0	1/1:5,12:20:39.10:559,39,0	1/1:1,2:3:6.02:90,6,0
chr10	110271817	.	GAT	G	402.47	PASS	AB=0.978;AC=13;AF=0.232;AN=56;BaseQRankSum=17.274;DP=617;FS=7.287;HRun=0;HaplotypeScore=131.6467;InbreedingCoeff=0.0862;MQ=73.51;MQ0=0;MQRankSum=-5.392;QD=1.47;ReadPosRankSum=6.808;VQSLOD=1.3119;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:41:13.76:84,0,14	0/0:7,0:7:21.07:0,21,423	0/0:14,0:14:39.13:0,39,688	0/0:23,0:23:61.76:0,62,1141	0/0:12,0:12:36.12:0,36,717	0/0:11,0:11:33.10:0,33,622	0/0:34,0:34:96.33:0,96,1848	0/1:29,1:30:28.80:29,0,329	1/1:31,0:31:52.05:152,52,0	0/0:19,0:19:54.18:0,54,1009	0/0:10,0:10:30.10:0,30,585	0/0:33,0:33:99:0,99,1903	0/0:19,0:19:57.02:0,57,1045	0/0:22,0:22:66.22:0,66,1251	0/0:36,0:36:99:0,108,2123	0/0:30,0:30:83.44:0,83,1646	0/1:24,0:24:38.84:39,0,49	0/1:20,0:20:29.67:46,0,30	0/1:15,0:15:17.71:18,0,30	0/1:18,0:18:16.66:31,0,17	0/1:50,0:50:54.52:55,0,119	0/0:9,0:9:27.09:0,27,523	0/0:9,0:9:24.08:0,24,487	0/0:37,0:37:99:0,111,2231	0/0:18,0:18:54.18:0,54,1060	1/1:22,0:22:5.23:68,5,0	0/1:16,3:20:35.34:35,0,131	0/1:3,0:3:4.76:5,0,32
chr10	110276646	.	GAGAA	G	2907.26	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=6.227;DP=605;FS=11.184;HRun=0;HaplotypeScore=108.9028;InbreedingCoeff=0.8816;MQ=64.74;MQ0=2;MQRankSum=0.198;QD=25.96;ReadPosRankSum=1.891;VQSLOD=3.1610;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.18:0,57,1366	0/0:7,0:7:21.07:0,21,531	0/0:29,0:18:19.48:0,19,289	0/0:20,0:14:13.77:0,14,458	1/1:6,23:29:66.18:1059,66,0	1/1:2,23:25:42.14:725,42,0	1/1:3,15:18:30.10:517,30,0	0/0:24,0:24:48.14:0,48,974	0/0:19,0:18:48.12:0,48,1069	0/0:14,0:14:36.12:0,36,909	0/0:18,0:18:48.16:0,48,1131	0/0:23,0:23:63.22:0,63,1529	0/0:25,0:25:66.23:0,66,1593	0/1:19,0:19:6.66:7,0,963	0/0:24,0:24:57.17:0,57,1290	0/0:24,0:24:66.23:0,66,1618	0/0:26,0:26:69.13:0,69,1548	0/0:31,0:31:78.22:0,78,1776	0/0:19,0:19:39.11:0,39,835	0/0:26,0:26:69.22:0,69,1513	0/0:15,0:15:33.08:0,33,730	0/0:19,0:19:54.18:0,54,1263	0/0:18,0:18:45.15:0,45,1060	0/0:25,0:25:56.61:0,57,1484	1/1:1,20:21:45.15:762,45,0	0/0:28,0:28:72.25:0,72,1774	0/0:27,0:26:75.26:0,75,1834	0/0:10,0:10:30.10:0,30,711
chr10	110276759	.	GAAAGAAAGAAAA	G	5778.81	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-0.927;DP=502;FS=2.130;HRun=0;HaplotypeScore=177.4284;InbreedingCoeff=0.2422;MQ=49.35;MQ0=14;MQRankSum=2.908;QD=13.57;ReadPosRankSum=-3.921;VQSLOD=3.1942;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:34.91:145,0,35	0/0:12,0:12:26.09:0,26,437	0/0:2,0:1:2.98:0,3,22	0/0:2,0:1:2.90:0,3,16	1/1:26,1:26:38.41:424,38,0	1/1:20,0:17:38.88:418,39,0	1/1:13,0:13:26.93:245,27,0	1/1:30,0:26:50.26:337,50,0	1/1:3,14:16:12.04:403,12,0	0/0:24,0:23:63.17:0,63,1913	0/0:14,0:14:39.11:0,39,1185	0/1:22,0:22:59.80:128,0,60	0/1:19,0:18:44.80:96,0,45	1/1:11,0:11:10.69:116,11,0	0/1:14,0:14:48.89:74,0,49	0/0:22,0:22:33.27:0,33,653	1/1:19,2:21:47.68:582,48,0	0/1:13,0:11:12.42:136,0,12	1/1:8,15:16:41.22:438,41,0	1/1:22,0:22:29.40:179,29,0	1/1:14,0:14:26.82:276,27,0	0/1:16,0:16:67.76:86,0,68	0/1:17,0:17:25.26:179,0,25	1/1:11,0:10:17.78:127,18,0	0/1:24,0:23:31.32:168,0,31	0/1:20,0:19:16.23:454,0,16	1/1:36,0:36:11.86:238,12,0	1/1:3,12:15:15.05:531,15,0
chr10	110276763	.	GAAAGAAAA	G	5399.14	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=2.222;DP=504;FS=4.015;HRun=0;HaplotypeScore=145.8280;InbreedingCoeff=0.3925;MQ=51.03;MQ0=13;MQRankSum=0.035;QD=12.76;ReadPosRankSum=-4.613;VQSLOD=2.0459;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:26.07:183,0,26	0/0:11,0:11:6.33:0,6,311	0/0:6,0:4:9.45:0,9,74	0/0:4,0:3:8.13:0,8,55	0/1:29,0:28:4.24:258,0,4	0/1:19,0:16:40.12:144,0,40	1/1:12,0:12:18.41:147,18,0	1/1:29,0:25:54.40:354,54,0	1/1:17,0:16:12.04:220,12,0	0/0:23,0:22:63.15:0,63,1459	0/0:15,0:15:42.04:0,42,964	0/1:20,0:20:27.31:203,0,27	1/1:20,0:19:31.04:271,31,0	1/1:11,0:11:29.72:228,30,0	1/1:18,0:18:29:240,29,0	0/0:22,0:22:39.15:0,39,589	1/1:21,0:21:42.08:394,42,0	0/1:12,0:10:59.84:71,0,60	1/1:22,0:15:17.27:286,17,0	1/1:2,18:20:29.46:216,29,0	1/1:13,0:13:10.33:211,10,0	0/1:18,0:18:38.49:190,0,38	1/1:17,0:17:34.69:252,35,0	1/1:9,0:9:20.78:152,21,0	0/1:23,0:22:16.52:292,0,17	1/1:21,1:22:6.98:470,7,0	1/1:2,34:36:11.88:316,12,0	1/1:14,0:14:15.05:302,15,0
chr10	110276767	.	GAAAA	G	5763.26	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=5.488;DP=501;FS=3.669;HRun=7;HaplotypeScore=112.3322;InbreedingCoeff=0.8427;MQ=51.45;MQ0=10;MQRankSum=-3.038;QD=13.47;ReadPosRankSum=-2.556;VQSLOD=0.5639;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:20.07:258,20,0	0/1:11,0:11:13.34:13,0,184	0/0:8,0:4:9.45:0,9,74	0/0:3,0:4:11.14:0,11,84	1/1:31,0:30:45.85:375,46,0	1/1:19,0:17:22.06:197,22,0	1/1:13,0:13:29.92:247,30,0	1/1:21,8:25:57.32:372,57,0	1/1:15,0:14:11.90:114,12,0	0/0:23,0:22:66.10:0,66,1085	0/0:16,0:16:45.03:0,45,735	1/1:19,0:19:30.99:244,31,0	1/1:22,0:21:50.54:373,51,0	1/1:11,1:12:35.62:257,36,0	1/1:16,0:16:34.03:274,34,0	0/0:21,0:21:22.08:0,22,511	1/1:22,0:22:50.40:387,50,0	1/1:13,0:11:10.80:134,11,0	1/1:16,0:15:37.64:305,38,0	1/1:18,0:18:24.76:162,25,0	1/1:13,0:13:26.35:207,26,0	1/1:19,0:19:34.50:278,35,0	1/1:18,0:18:47.47:342,47,0	1/1:8,0:8:20.78:152,21,0	1/1:23,0:22:50.47:390,50,0	1/1:22,0:22:21.06:382,21,0	1/1:35,0:35:12.03:135,12,0	1/1:12,0:12:15.04:167,15,0
chr10	110280996	.	ATCTCTCTCTC	A	115.81	PASS	AB=0.927;AC=12;AF=0.231;AN=52;BaseQRankSum=0.096;DP=610;FS=2.514;HRun=0;HaplotypeScore=189.5638;InbreedingCoeff=0.5445;MQ=68.63;MQ0=16;MQRankSum=-3.251;QD=0.96;ReadPosRankSum=-0.681;VQSLOD=2.7290;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:29.89:0,30,446	0/0:6,0:7:3.01:0,3,51	./.	./.	1/1:17,2:20:5.96:47,6,0	1/1:8,2:10:5.91:38,6,0	1/1:14,3:18:14.82:99,15,0	0/0:42,0:42:9.88:0,10,72	0/1:15,0:16:18.65:19,0,316	0/0:24,0:24:24.08:0,24,947	0/0:26,0:26:18.06:0,18,709	0/0:23,0:23:26.84:0,27,844	0/0:19,0:19:11.71:0,12,405	0/0:23,0:22:14.71:0,15,509	0/0:21,0:21:15.05:0,15,618	0/0:24,0:24:45.14:0,45,1497	0/0:25,0:23:32.46:0,32,567	0/0:16,0:16:12.02:0,12,201	0/0:12,0:12:4.57:0,5,72	0/1:23,0:23:4.38:4,0,280	0/0:14,0:13:8.39:0,8,116	0/0:19,0:19:12.03:0,12,323	1/1:18,0:17:0.47:1,0,0	0/0:29,0:26:19.17:0,19,832	1/1:8,5:14:8.60:50,9,0	0/0:32,0:34:9.04:0,9,825	0/0:26,0:27:33.03:0,33,491	0/0:25,0:22:3.01:0,3,49
chr10	110281056	.	G	GTG	4041.33	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=6.196;DP=641;FS=7.870;HRun=0;HaplotypeScore=171.6823;InbreedingCoeff=0.8323;MQ=44.82;MQ0=17;MQRankSum=0.994;QD=8.13;ReadPosRankSum=0.940;VQSLOD=2.3995;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:36:19.97:183,20,0	0/0:12,0:12:27.08:0,27,311	0/0:19,0:9:21.05:0,21,229	0/0:18,0:10:17.64:0,18,183	1/1:21,0:20:11.81:80,12,0	1/1:27,0:24:3.74:39,4,0	0/0:21,0:21:5.18:0,5,37	1/1:35,0:34:34.87:230,35,0	1/1:25,0:24:15.39:171,15,0	0/0:26,0:24:33.80:0,34,441	0/0:18,0:17:32.86:0,33,384	0/1:25,0:24:2.60:140,0,3	1/1:18,0:17:31.59:216,32,0	1/1:11,0:10:17.60:133,18,0	1/1:17,0:16:18.38:143,18,0	0/0:30,0:29:43.43:0,43,484	1/1:30,0:29:27.59:240,28,0	1/1:19,0:17:17.22:168,17,0	1/1:21,0:16:17.77:241,18,0	1/1:12,16:29:21.05:243,21,0	1/1:16,0:14:5.10:68,5,0	1/1:22,0:22:10.05:58,10,0	1/1:19,0:19:20.45:172,20,0	1/1:28,0:27:26.99:217,27,0	1/1:16,0:16:8.67:58,9,0	1/1:34,0:29:49.52:352,50,0	1/1:30,0:29:15.55:620,16,0	1/1:17,0:17:22.93:268,23,0
chr10	110281061	.	T	TGTGTGT	6640.19	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=3.662;DP=666;FS=9.427;HRun=0;HaplotypeScore=203.1369;InbreedingCoeff=0.6182;MQ=46.55;MQ0=17;MQRankSum=-0.578;QD=11.90;ReadPosRankSum=-0.858;VQSLOD=3.1505;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:36:32.95:384,33,0	0/0:12,0:12:27.09:0,27,554	0/0:22,0:12:21.01:0,21,254	0/0:28,0:16:17.29:0,17,230	1/1:21,0:20:11.24:191,11,0	1/1:28,0:25:7.55:142,8,0	1/1:24,0:24:8.65:54,9,0	1/1:42,0:41:32.32:301,32,0	1/1:23,0:22:20.49:277,20,0	0/0:26,0:24:50.26:0,50,772	0/0:19,0:18:33.58:0,34,695	1/1:24,0:23:35.88:636,36,0	1/1:19,0:18:32.61:688,33,0	1/1:13,0:12:17.62:356,18,0	1/1:16,0:15:20.74:401,21,0	0/1:30,0:29:8.13:8,0,711	1/1:30,0:29:34.93:436,35,0	1/1:19,0:17:16.28:181,16,0	0/1:21,0:17:29.26:39,0,29	1/1:31,0:31:4.40:72,4,0	1/1:18,0:15:10.31:130,10,0	1/1:10,11:22:4.35:53,4,0	1/1:19,0:19:19.59:522,20,0	1/1:28,0:27:33.07:734,33,0	1/1:15,0:15:8.08:148,8,0	1/1:33,0:28:52.21:495,52,0	0/1:28,0:28:56.66:57,0,116	1/1:17,0:17:30.61:335,31,0
chr10	110281215	.	TA	T	3000.23	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.781;DP=630;FS=0.887;HRun=3;HaplotypeScore=71.1593;InbreedingCoeff=0.9900;MQ=68.50;MQ0=1;MQRankSum=-0.933;QD=32.26;ReadPosRankSum=2.105;VQSLOD=4.0117;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.26:0,90,1253	0/0:12,0:12:36.12:0,36,510	0/0:19,0:18:14.05:0,14,496	0/0:20,0:20:42.08:0,42,560	1/1:0,28:28:78.24:967,78,0	1/1:0,23:23:69.22:855,69,0	1/1:0,19:19:51.16:632,51,0	0/0:30,0:30:84.28:0,84,1189	0/0:26,0:26:72.24:0,72,1031	0/0:27,0:27:78.26:0,78,1108	0/0:20,0:20:57.19:0,57,820	0/0:20,0:19:45.15:0,45,648	0/0:15,0:15:42.14:0,42,590	0/0:15,0:15:45.15:0,45,648	0/0:20,0:20:57.19:0,57,816	0/0:25,0:25:72.23:0,72,1018	0/0:27,0:27:66.18:0,66,927	0/0:17,0:17:45.15:0,45,642	0/0:21,0:21:63.21:0,63,906	0/0:27,0:27:81.27:0,81,1166	0/0:26,0:26:72.22:0,72,1012	0/0:21,0:21:60.20:0,60,864	0/0:23,0:23:69.23:0,69,993	0/0:15,0:15:42.14:0,42,601	1/1:1,22:23:57.18:707,57,0	0/0:37,0:35:99:0,102,1430	0/0:34,0:34:93.31:0,93,1334	0/0:5,0:5:15.05:0,15,216
chr10	110283766	.	C	CT	6169.85	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-10.972;DP=485;FS=4.258;HRun=9;HaplotypeScore=50.3163;InbreedingCoeff=0.9150;MQ=70.19;MQ0=0;MQRankSum=-0.884;QD=24.68;ReadPosRankSum=1.439;VQSLOD=5.7003;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,31:35:84.23:929,84,0	0/0:11,0:11:29.99:0,30,260	0/1:12,0:10:5.65:6,0,90	0/0:5,0:5:5.87:0,6,50	0/0:29,0:29:77.95:0,78,671	0/0:24,0:24:65.98:0,66,573	0/0:8,0:8:21:0,21,182	1/1:7,21:28:60.15:654,60,0	1/1:3,8:11:24.06:265,24,0	0/0:16,0:16:41.98:0,42,363	0/0:29,0:29:86.98:0,87,755	0/0:9,0:9:23.98:0,24,204	0/0:15,0:15:38.99:0,39,339	0/0:10,0:10:26.99:0,27,234	0/0:15,0:15:41.99:0,42,365	0/0:10,0:10:29.98:0,30,257	1/1:5,25:30:17.48:645,17,0	1/1:0,14:14:30.08:332,30,0	1/1:3,15:18:50.94:531,51,0	1/1:5,23:28:66.15:718,66,0	1/1:1,4:5:12.03:133,12,0	0/0:9,0:9:26.99:0,27,234	0/0:10,0:10:29.99:0,30,260	0/0:5,0:5:11.99:0,12,104	0/0:30,0:30:80.97:0,81,703	1/1:2,14:16:42.11:465,42,0	1/1:5,30:35:83.89:929,84,0	1/1:0,18:18:51.14:564,51,0
chr10	110285697	.	A	AT	24169.42	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-13.453;DP=741;FS=3.691;HRun=2;HaplotypeScore=65.7060;InbreedingCoeff=0.9994;MQ=88.25;MQ0=0;MQRankSum=-6.800;QD=39.69;ReadPosRankSum=2.773;VQSLOD=5.4670;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,69:71:99:2981,208,0	0/0:11,0:11:30.09:0,30,372	0/0:28,0:28:84.26:0,84,1035	0/0:25,0:25:60.18:0,60,731	1/1:2,14:16:42.10:581,42,0	1/1:0,23:23:63.21:907,63,0	1/1:3,29:32:78.26:1123,78,0	1/1:1,26:27:78.26:1123,78,0	1/1:1,24:25:63.21:907,63,0	0/0:30,0:30:84.26:0,84,1039	0/0:10,0:10:30.09:0,30,371	1/1:1,38:39:99:1640,114,0	1/1:1,21:22:63.21:906,63,0	1/1:1,24:25:72.24:1020,72,0	1/1:1,31:32:84.28:1210,84,0	0/0:28,0:28:84.26:0,84,1041	1/1:0,29:29:81.27:1167,81,0	1/1:1,27:28:78.26:1123,78,0	1/1:2,21:23:60.19:843,60,0	1/1:0,20:20:60.16:841,60,0	1/1:1,39:40:99:1596,111,0	1/1:1,25:26:63.21:907,63,0	1/1:0,22:22:63.05:907,63,0	1/1:1,34:34:99:1426,99,0	1/1:1,21:22:63.21:907,63,0	1/1:2,24:25:72.22:1017,72,0	1/1:1,17:18:48.16:691,48,0	1/1:0,8:8:24.08:346,24,0
chr10	110286303	.	GAGAGAGAGA	G	4315.86	PASS	AB=0.931;AC=31;AF=0.620;AN=50;BaseQRankSum=10.332;DP=599;FS=74.163;HRun=0;HaplotypeScore=154.3395;InbreedingCoeff=0.3712;MQ=33.18;MQ0=109;MQRankSum=-8.215;QD=11.51;ReadPosRankSum=-2.070;VQSLOD=1.0735;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:34:29.93:402,30,0	0/0:9,0:8:18.06:0,18,316	./.	./.	0/0:24,0:23:4.54:0,5,334	0/0:27,0:23:11.55:0,12,423	0/1:27,0:18:1.27:1,0,457	0/1:20,0:18:41.65:229,0,42	1/1:12,0:9:18.49:250,18,0	0/0:30,0:29:79.80:0,80,1501	0/0:16,0:16:21.05:0,21,343	0/1:16,2:15:14.72:384,0,15	0/1:8,13:19:3.88:207,0,4	1/1:8,5:10:12:225,12,0	1/1:19,0:16:33.02:376,33,0	0/0:25,0:23:57.66:0,58,1392	1/1:27,0:25:16.94:543,17,0	1/1:12,0:10:24.66:325,25,0	1/1:19,0:16:6.28:175,6,0	1/1:14,0:14:5.35:205,5,0	1/1:20,0:13:11.10:60,11,0	1/1:14,9:21:6.64:248,7,0	1/1:11,0:10:4.29:117,4,0	0/1:30,0:24:6.37:29,0,6	0/1:17,0:17:18.84:19,0,438	0/1:25,0:20:99:295,0,151	1/1:9,0:6:11.06:225,11,0	./.
chr10	110286311	.	GA	G	3605.13	PASS	AB=0.802;AC=35;AF=0.673;AN=52;BaseQRankSum=10.529;DP=619;FS=11.146;HRun=1;HaplotypeScore=141.5498;InbreedingCoeff=0.4057;MQ=33.54;MQ0=105;MQRankSum=-8.412;QD=8.10;ReadPosRankSum=-2.212;VQSLOD=-0.5166;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,8:35:32.87:270,33,0	0/0:10,0:9:18.06:0,18,224	./.	0/0:61,0:4:6.49:0,6,71	0/1:21,1:21:4.27:4,0,18	0/1:21,7:24:41.99:42,0,54	0/1:17,9:17:8:8,0,110	0/1:15,11:24:19.48:425,0,19	1/1:4,8:9:21.43:214,21,0	0/0:25,0:24:59.66:0,60,673	0/0:16,0:16:24.08:0,24,299	1/1:9,8:14:25.50:246,26,0	0/1:17,2:17:0.50:96,0,1	1/1:7,8:12:14.36:106,14,0	1/1:5,14:16:26.25:189,26,0	0/0:27,0:26:60.62:0,61,674	1/1:28,2:28:18.38:313,18,0	1/1:9,4:11:27.66:315,28,0	1/1:13,10:21:24.43:367,24,0	1/1:5,8:13:16.92:113,17,0	1/1:13,9:15:14.22:77,14,0	1/1:21,4:23:7.33:77,7,0	1/1:5,9:12:6.03:98,6,0	1/1:23,5:23:14.70:72,15,0	0/1:10,6:16:30.88:31,0,36	0/1:20,8:23:45.02:318,0,45	1/1:3,7:7:14.06:224,14,0	./.
chr10	110286312	.	A	AG	3478.57	PASS	AB=0.958;AC=35;AF=0.648;AN=54;BaseQRankSum=9.791;DP=650;FS=8.694;HRun=1;HaplotypeScore=166.4461;InbreedingCoeff=0.4414;MQ=32.98;MQ0=105;MQRankSum=-7.732;QD=7.65;ReadPosRankSum=-2.999;VQSLOD=-0.6737;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:40,2:38:32.79:254,33,0	0/0:10,0:9:15.05:0,15,190	./.	0/0:62,0:4:7.57:0,8,77	0/0:21,0:20:1.19:0,1,3	1/1:19,10:24:3.45:55,3,0	0/1:22,4:18:15.84:16,0,64	0/1:28,1:27:23.23:476,0,23	1/1:14,0:11:20.31:199,20,0	0/0:24,0:23:55.52:0,56,646	0/0:16,0:16:24.08:0,24,304	1/1:19,1:17:28.07:256,28,0	0/1:19,1:17:2.79:82,0,3	1/1:16,1:14:14.42:99,14,0	1/1:19,0:16:23.91:165,24,0	0/0:26,0:25:47.46:0,47,580	1/1:32,0:30:21.35:253,21,0	1/1:14,0:12:20.88:268,21,0	1/1:24,0:22:7.56:329,8,0	1/1:14,0:14:15.16:96,15,0	1/1:23,1:17:2.04:51,2,0	1/1:23,2:24:11.29:84,11,0	1/1:14,1:13:1.54:77,2,0	1/1:27,1:23:8.76:53,9,0	0/1:15,0:15:2.37:31,0,2	0/1:33,0:28:14.65:417,0,15	1/1:13,0:10:11.39:216,11,0	0/0:2,0:1:0:0,0,0
chr10	110286315	.	G	GGAA	7288.42	PASS	AB=0.944;AC=41;AF=0.759;AN=54;BaseQRankSum=7.089;DP=648;FS=1.982;HRun=0;HaplotypeScore=182.1733;InbreedingCoeff=0.6946;MQ=32.05;MQ0=106;MQRankSum=-7.885;QD=13.47;ReadPosRankSum=-4.373;VQSLOD=4.0668;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:36,5:37:31.17:457,31,0	0/0:9,0:8:17.99:0,18,252	./.	0/1:63,0:4:8.02:8,0,81	1/1:9,12:20:17.32:153,17,0	1/1:24,2:21:31.81:295,32,0	0/1:28,0:19:1.50:133,0,2	1/1:32,0:30:13.44:913,13,0	1/1:17,0:14:33.07:406,33,0	0/0:23,0:22:51.01:0,51,685	0/0:16,0:16:24.08:0,24,375	1/1:24,0:21:23.65:358,24,0	1/1:17,0:14:11.66:107,12,0	1/1:18,0:15:12.65:177,13,0	1/1:19,0:16:47.28:439,47,0	0/0:22,0:21:51.15:0,51,779	1/1:21,5:24:36.59:460,37,0	1/1:10,5:13:10.81:423,11,0	1/1:25,0:23:53.89:744,54,0	1/1:15,0:15:32.25:254,32,0	0/1:20,5:18:3.36:94,0,3	1/1:26,0:24:20.56:146,21,0	1/1:15,0:13:33.69:246,34,0	1/1:16,13:24:15.70:160,16,0	1/1:10,3:14:23.17:183,23,0	1/1:31,0:27:45.53:771,46,0	1/1:13,0:10:20.13:361,20,0	0/0:2,0:1:0:0,0,0
chr10	110286350	.	GA	G	1813.18	PASS	AB=0.793;AC=11;AF=0.196;AN=56;BaseQRankSum=6.127;DP=702;FS=2.680;HRun=2;HaplotypeScore=229.4825;InbreedingCoeff=-0.2395;MQ=38.55;MQ0=47;MQRankSum=-6.587;QD=6.82;ReadPosRankSum=-2.770;VQSLOD=-0.2289;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:35,20:53:99:531,0,502	0/0:10,0:10:30.10:0,30,447	0/0:34,1:5:8.21:0,8,174	0/0:51,1:12:25.63:0,26,329	0/0:9,1:9:13.59:0,14,151	0/0:27,0:21:21.68:0,22,515	0/1:18,5:16:25.39:25,0,415	0/0:42,2:43:24.59:0,25,1259	0/1:14,12:24:99:434,0,317	0/0:25,0:25:72.19:0,72,1019	0/0:20,0:20:57.16:0,57,796	0/0:28,0:26:72.23:0,72,1050	0/0:21,0:15:33.10:0,33,472	0/0:30,0:27:72.23:0,72,1031	0/0:28,0:26:78.26:0,78,1151	0/0:29,0:29:87.27:0,87,1264	0/1:18,6:23:99:181,0,361	0/1:13,6:17:99:153,0,237	0/1:19,3:21:59.68:60,0,497	0/1:16,2:17:29.30:29,0,411	0/1:19,5:19:99:135,0,241	0/0:17,0:15:24.40:0,24,326	0/0:18,0:16:45.06:0,45,630	0/0:27,0:24:36.09:0,36,500	0/0:13,1:14:29.20:0,29,415	0/1:27,9:31:99:231,0,674	0/1:11,5:13:99:150,0,359	0/1:2,1:3:12.58:33,0,13
chr10	110286364	.	A	AG	4218.72	PASS	AB=0.723;AC=11;AF=0.196;AN=56;BaseQRankSum=2.993;DP=702;FS=0.000;HRun=2;HaplotypeScore=230.7213;InbreedingCoeff=-0.2151;MQ=44.03;MQ0=31;MQRankSum=-3.019;QD=14.80;ReadPosRankSum=-0.368;VQSLOD=4.1523;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,23:50:99:871,0,313	0/0:11,0:11:33.09:0,33,396	0/0:33,0:8:21.07:0,21,260	0/0:49,0:18:37.71:0,38,467	0/0:7,0:7:6.49:0,6,70	0/0:23,0:19:4.44:0,4,420	0/0:20,0:18:51.04:0,51,564	0/1:29,8:36:99:281,0,535	0/1:11,18:28:99:707,0,215	0/0:24,0:24:72.23:0,72,892	0/0:21,0:21:60.19:0,60,744	0/0:30,0:28:75.18:0,75,899	0/0:23,0:18:45.14:0,45,539	0/0:30,0:27:78.24:0,78,960	0/0:31,0:29:75.23:0,75,921	0/0:27,0:27:81.25:0,81,1004	0/1:15,9:23:99:402,0,131	0/1:8,10:17:99:343,0,115	0/1:18,10:26:99:359,0,376	0/1:12,5:16:99:159,0,323	0/1:12,15:25:99:439,0,134	0/0:23,0:22:44.80:0,45,500	0/0:21,0:19:45.12:0,45,555	0/0:28,0:25:45.14:0,45,546	0/0:16,0:16:32.57:0,33,421	0/1:22,10:29:99:339,0,492	0/1:10,7:14:99:260,0,182	0/1:4,1:5:5.40:59,0,5
chr10	110286375	.	G	GA	2293.24	PASS	AB=0.902;AC=21;AF=0.375;AN=56;BaseQRankSum=11.079;DP=738;FS=2.114;HRun=1;HaplotypeScore=244.4430;InbreedingCoeff=-0.5732;MQ=54.00;MQ0=15;MQRankSum=-12.570;QD=4.21;ReadPosRankSum=0.482;VQSLOD=0.0310;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:48,0:47:99:117,0,918	0/0:11,0:11:33.11:0,33,425	0/0:38,0:17:39.06:0,39,447	0/0:47,0:26:38.03:0,38,597	0/1:12,1:13:3.89:4,0,301	0/1:18,8:25:99:272,0,330	0/1:20,6:25:99:114,0,438	0/1:36,0:36:32.11:32,0,536	0/1:30,0:30:91.54:92,0,682	0/0:25,0:25:75.24:0,75,972	0/0:20,0:20:60.20:0,60,779	0/1:26,11:36:99:310,0,806	0/0:20,2:20:15.85:0,16,655	0/1:22,6:29:99:126,0,774	0/1:21,13:33:99:220,0,590	0/0:29,0:29:87.24:0,87,1098	0/1:23,0:22:47.46:47,0,373	0/1:17,0:17:18.26:18,0,387	0/1:22,0:22:85.65:86,0,441	0/1:16,0:15:99:176,0,173	0/1:30,0:28:10.69:11,0,539	0/1:18,5:22:99:144,0,484	0/1:18,6:23:99:103,0,395	0/1:24,8:32:23.03:23,0,633	0/1:13,9:22:99:190,0,317	0/1:32,0:31:99:246,0,327	0/1:17,0:14:99:115,0,203	0/1:7,0:7:5.19:5,0,143
chr10	110286376	.	A	AG	2880.46	PASS	AB=0.887;AC=19;AF=0.339;AN=56;BaseQRankSum=10.482;DP=730;FS=0.750;HRun=2;HaplotypeScore=240.0188;InbreedingCoeff=-0.5081;MQ=55.18;MQ0=12;MQRankSum=-11.912;QD=5.87;ReadPosRankSum=-0.008;VQSLOD=0.2559;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:40,8:47:99:323,0,802	0/0:11,0:11:33.10:0,33,409	0/0:40,0:20:39:0,39,470	0/0:46,1:27:35.24:0,35,579	0/0:12,0:12:30.09:0,30,369	0/1:25,0:25:99:124,0,398	0/1:24,0:23:7.11:7,0,475	0/1:28,6:34:99:172,0,533	0/1:22,8:30:99:260,0,548	0/0:25,0:25:75.07:0,75,907	0/0:20,0:20:60.19:0,60,744	0/1:36,0:36:99:129,0,759	0/0:23,0:21:32.74:0,33,641	0/1:29,0:29:28.86:29,0,736	0/1:34,0:33:88.72:89,0,560	0/0:29,0:29:84.26:0,84,1039	0/1:19,5:22:99:155,0,363	0/1:15,2:17:99:104,0,319	0/1:16,7:23:99:246,0,333	0/1:7,9:15:99:341,0,177	0/1:25,4:27:79.43:79,0,502	0/1:21,0:21:36.78:37,0,467	0/1:24,0:23:29.83:30,0,413	0/0:32,0:32:14.82:0,15,710	0/1:22,0:22:81.81:82,0,378	0/1:19,12:30:99:573,0,295	0/1:10,5:14:99:238,0,199	0/1:6,1:7:25.08:25,0,163
chr10	110288069	.	T	TCC	5970.80	PASS	AB=0.989;AC=39;AF=0.696;AN=56;BaseQRankSum=4.286;DP=540;FS=14.624;HRun=1;HaplotypeScore=122.4213;InbreedingCoeff=0.5511;MQ=52.26;MQ0=36;MQRankSum=1.450;QD=13.63;ReadPosRankSum=5.520;VQSLOD=0.4514;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:25:47.75:420,48,0	0/0:8,0:8:20.93:0,21,166	0/0:12,0:6:17.77:0,18,147	0/0:33,0:12:16.76:0,17,196	1/1:30,0:28:42.82:326,43,0	0/1:29,0:26:5.47:302,0,5	1/1:13,0:12:29.99:260,30,0	1/1:38,0:37:2.90:425,3,0	1/1:15,2:15:10.58:186,11,0	0/0:22,0:22:65.65:0,66,565	0/0:13,0:13:17.98:0,18,149	1/1:16,2:18:19.34:313,19,0	1/1:11,2:12:2.29:203,2,0	1/1:10,2:12:32.88:310,33,0	1/1:20,1:19:49.61:374,50,0	0/0:14,0:13:29.84:0,30,236	1/1:18,0:16:24.71:243,25,0	0/1:8,0:7:6.07:96,0,6	0/1:21,0:18:0.05:190,0,0	1/1:22,0:22:46.72:384,47,0	0/1:17,1:18:12.06:168,0,12	1/1:10,1:11:17.55:119,18,0	1/1:12,4:16:29.79:282,30,0	1/1:19,0:17:12.88:194,13,0	0/1:19,0:18:17.39:195,0,17	1/1:22,2:23:10.34:426,10,0	1/1:21,1:21:20.11:339,20,0	1/1:18,0:14:3.32:216,3,0
chr10	110288117	.	C	CT	13252.11	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=7.587;DP=553;FS=3.975;HRun=2;HaplotypeScore=162.2077;InbreedingCoeff=0.9886;MQ=51.45;MQ0=26;MQRankSum=-6.207;QD=30.46;ReadPosRankSum=-3.219;VQSLOD=3.5290;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:6,13:17:32.98:419,33,0	0/0:9,0:8:23.99:0,24,309	0/0:30,0:15:26.89:0,27,393	0/0:34,0:17:16.23:0,16,182	1/1:8,20:27:41.99:558,42,0	1/1:5,17:21:46.82:689,47,0	1/1:5,10:14:17.58:437,18,0	1/1:6,26:31:67.91:1174,68,0	1/1:3,26:27:75:1021,75,0	0/0:19,0:19:57.16:0,57,767	0/0:11,0:11:27.09:0,27,376	1/1:5,19:24:53.22:633,53,0	1/1:4,16:19:51.17:741,51,0	1/1:2,11:12:27.56:393,28,0	1/1:4,19:22:51.08:683,51,0	0/0:14,0:14:41.63:0,42,549	1/1:4,8:10:30.10:440,30,0	1/1:3,7:9:18.06:267,18,0	1/1:2,8:10:30.08:419,30,0	1/1:6,18:23:51.59:748,52,0	1/1:5,10:14:26.45:363,26,0	1/1:0,14:14:24.01:307,24,0	1/1:0,21:21:39.46:520,39,0	1/1:3,13:15:14.69:200,15,0	1/1:5,18:23:54.11:764,54,0	1/1:2,26:28:84.28:1217,84,0	1/1:9,13:21:56.97:776,57,0	1/1:3,12:12:33.11:482,33,0
chr10	110288157	.	T	TC	17090.25	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=11.771;DP=556;FS=14.646;HRun=1;HaplotypeScore=144.1642;InbreedingCoeff=0.9979;MQ=60.08;MQ0=0;MQRankSum=-8.625;QD=39.84;ReadPosRankSum=2.417;VQSLOD=2.6766;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:25:57.39:892,57,0	0/0:13,0:13:39.09:0,39,470	0/0:27,0:20:50.36:0,50,592	0/0:31,0:27:57.72:0,58,687	1/1:1,24:25:72.24:1053,72,0	1/1:0,21:21:57.12:823,57,0	1/1:2,8:10:30.03:402,30,0	1/1:6,17:23:66.12:895,66,0	1/1:5,23:28:75.08:990,75,0	0/0:19,0:19:54.17:0,54,691	0/0:14,0:14:42.14:0,42,545	1/1:2,19:21:60.20:889,60,0	1/1:2,16:18:48.06:647,48,0	1/1:2,12:14:39.06:550,39,0	1/1:1,20:21:60.13:863,60,0	0/0:23,0:23:69.20:0,69,879	1/1:0,9:9:27.09:402,27,0	1/1:0,15:15:45.15:667,45,0	1/1:0,17:17:48.08:644,48,0	1/1:0,25:25:75.25:1104,75,0	1/1:0,8:8:17.92:215,18,0	1/1:0,17:17:51.09:726,51,0	1/1:1,17:18:51.17:760,51,0	1/1:0,20:20:51.17:762,51,0	1/1:2,21:23:60.11:848,60,0	1/1:1,25:26:78.26:1166,78,0	1/1:0,31:31:84.28:1255,84,0	1/1:1,12:13:36.12:538,36,0
chr10	110288777	.	AG	A	17026.85	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=7.448;DP=551;FS=5.859;HRun=1;HaplotypeScore=68.2120;InbreedingCoeff=0.9982;MQ=78.05;MQ0=0;MQRankSum=-3.480;QD=37.84;ReadPosRankSum=2.603;VQSLOD=5.5545;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:66.22:918,66,0	0/0:14,0:14:42.13:0,42,595	0/0:18,0:18:48.14:0,48,662	0/0:13,0:13:33.54:0,34,408	1/1:0,33:33:96.15:1253,96,0	1/1:0,24:24:57.19:796,57,0	1/1:0,18:18:48.16:671,48,0	1/1:0,24:24:72.21:970,72,0	1/1:0,10:10:27.09:377,27,0	0/0:17,0:17:51.16:0,51,716	0/0:23,0:23:69.19:0,69,952	1/1:0,13:13:39.09:523,39,0	1/1:0,17:17:36.12:503,36,0	1/1:0,15:15:33.11:461,33,0	1/1:0,26:26:66.22:922,66,0	0/0:16,0:16:48.16:0,48,702	1/1:1,21:22:57.66:797,58,0	1/1:0,23:23:69.23:964,69,0	1/1:0,24:24:72.21:983,72,0	1/1:0,21:21:63.13:837,63,0	1/1:0,8:8:24.08:335,24,0	1/1:0,23:23:69.19:938,69,0	1/1:0,25:25:75.21:1023,75,0	1/1:0,8:8:21.07:293,21,0	1/1:0,19:19:51.17:708,51,0	1/1:0,27:27:81.23:1079,81,0	1/1:0,35:35:93.31:1299,93,0	1/1:0,11:11:27.09:377,27,0
chr10	110289891	.	GTGTGT	G	2074.48	PASS	AB=0.996;AC=20;AF=0.357;AN=56;BaseQRankSum=4.501;DP=902;FS=21.315;HRun=0;HaplotypeScore=215.5641;InbreedingCoeff=0.0733;MQ=61.14;MQ0=57;MQRankSum=-1.126;QD=4.35;ReadPosRankSum=-4.208;VQSLOD=0.5970;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:39:56.45:56,0,640	0/0:20,0:20:57.20:0,57,1652	0/0:64,0:24:38.23:0,38,523	0/0:36,0:18:39.12:0,39,594	1/1:25,0:24:47.34:328,47,0	1/1:25,1:22:44.57:371,45,0	1/1:21,2:21:35.50:326,36,0	0/1:26,0:22:99:155,0,423	0/0:37,0:36:83.32:0,83,1073	0/0:30,0:30:90.31:0,90,2611	0/0:19,0:19:54.17:0,54,1355	0/0:37,0:35:50.45:0,50,963	0/0:24,0:22:53.23:0,53,562	0/1:40,0:37:51.66:52,0,675	0/0:45,0:43:54.69:0,55,1017	0/0:40,0:40:99:0,117,3351	0/1:21,0:21:99:106,0,360	0/1:21,1:20:19.79:20,0,407	0/1:19,0:15:76.90:172,0,77	0/1:37,0:33:74.81:75,0,639	0/1:42,0:35:7.69:8,0,757	0/1:33,0:26:99:132,0,515	0/0:24,0:22:13.87:0,14,494	0/1:36,0:32:28.01:28,0,562	1/1:23,0:23:47.29:321,47,0	0/1:36,0:27:43.22:43,0,542	0/0:46,0:39:62.26:0,62,1004	0/1:27,0:20:66.60:67,0,260
chr10	110289893	.	GTGT	G	5655.17	PASS	AB=0.960;AC=26;AF=0.464;AN=56;BaseQRankSum=-6.778;DP=907;FS=27.549;HRun=0;HaplotypeScore=174.6630;InbreedingCoeff=-0.1787;MQ=59.97;MQ0=57;MQRankSum=-4.390;QD=8.43;ReadPosRankSum=-6.786;VQSLOD=0.9446;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:38,3:39:76.65:278,0,77	0/0:19,0:19:57.19:0,57,1236	0/0:64,0:22:41.23:0,41,497	0/0:35,0:17:38.71:0,39,505	1/1:1,23:23:48.16:798,48,0	1/1:6,19:21:45.15:726,45,0	1/1:5,18:21:36.11:560,36,0	0/1:28,0:24:63.46:227,0,63	0/1:38,0:36:19.63:20,0,161	0/0:32,0:32:96.33:0,96,2033	0/0:20,0:20:57.18:0,57,1081	0/1:36,2:36:99:154,0,145	0/0:25,0:23:13.55:0,14,95	0/1:39,2:38:99:227,0,103	0/1:41,4:43:99:148,0,157	0/0:40,0:40:99:0,120,2551	0/1:18,2:20:46.42:161,0,46	0/1:23,1:22:55.87:56,0,66	1/1:19,0:15:2.54:278,3,0	0/1:36,1:33:89.30:89,0,104	0/1:42,1:36:88.98:212,0,89	0/1:33,1:27:95.98:246,0,96	0/1:23,1:22:61.62:96,0,62	0/1:34,2:32:81.24:138,0,81	1/1:1,23:24:48.16:799,48,0	0/1:34,1:26:69.83:199,0,70	0/1:44,1:38:71.54:72,0,126	0/1:26,1:20:28.32:170,0,28
chr10	110289895	.	GT	G	17644.87	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=10.331;DP=891;FS=13.601;HRun=2;HaplotypeScore=106.4311;InbreedingCoeff=0.9999;MQ=60.45;MQ0=56;MQRankSum=-1.389;QD=25.99;ReadPosRankSum=4.050;VQSLOD=3.4413;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,34:36:91.12:1097,91,0	0/0:19,0:19:57.19:0,57,845	0/0:63,0:20:42.36:0,42,489	0/0:36,0:18:41.09:0,41,458	1/1:24,0:23:46.13:259,46,0	1/1:24,0:20:43.05:225,43,0	1/1:23,0:21:34.85:233,35,0	1/1:5,24:25:64.10:771,64,0	1/1:1,36:35:99:1307,102,0	0/0:33,0:33:99:0,99,1438	0/0:20,0:20:57.18:0,57,804	1/1:5,33:36:99:1285,105,0	1/1:1,24:23:54.18:700,54,0	1/1:4,35:36:89.94:1096,90,0	1/1:8,36:42:99:1345,111,0	0/0:41,0:41:99:0,123,1808	1/1:2,18:20:51.01:619,51,0	1/1:3,20:21:50.82:612,51,0	1/1:6,13:15:36.54:428,37,0	1/1:3,33:32:78.25:1009,78,0	1/1:6,37:36:93.16:1160,93,0	1/1:8,25:26:67.56:841,68,0	1/1:1,22:21:57.05:716,57,0	1/1:4,28:28:71.96:885,72,0	1/1:23,0:23:46:242,46,0	1/1:4,31:26:75.08:919,75,0	1/1:5,39:37:99:1377,108,0	1/1:4,23:20:42:518,42,0
chr10	110289896	.	T	TG	5202.92	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=12.297;DP=888;FS=13.823;HRun=1;HaplotypeScore=151.3284;InbreedingCoeff=0.9580;MQ=60.43;MQ0=55;MQRankSum=-2.624;QD=7.69;ReadPosRankSum=3.853;VQSLOD=0.8684;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,1:36:59.51:324,60,0	0/0:19,0:19:57.19:0,57,794	0/0:60,0:18:42.03:0,42,490	0/0:37,0:19:41.10:0,41,458	1/1:23,1:23:9.94:33,10,0	1/1:20,4:20:8.35:27,8,0	1/1:20,3:21:14.36:97,14,0	1/1:24,4:24:56.89:483,57,0	1/1:36,1:35:59.95:195,60,0	0/0:33,0:33:99:0,99,1356	0/0:21,0:21:57.17:0,57,767	1/1:36,2:36:52.65:248,53,0	1/1:24,1:23:35.13:161,35,0	1/1:38,1:36:55.35:281,55,0	1/1:40,4:42:62.44:225,62,0	0/0:41,0:41:99:0,123,1705	1/1:21,0:21:37.68:286,38,0	1/1:22,1:21:28.18:112,28,0	1/1:13,3:14:37.22:424,37,0	1/1:34,2:32:51.70:271,52,0	1/1:38,5:36:65.65:415,66,0	1/1:27,7:27:55.95:451,56,0	1/1:23,0:21:35.68:147,36,0	1/1:30,1:27:44.51:225,45,0	1/1:23,0:23:7.54:18,8,0	1/1:33,3:27:46.49:284,46,0	1/1:40,3:36:67.11:292,67,0	1/1:24,3:20:29.66:205,30,0
chr10	110290397	.	GC	G	2039.41	PASS	AB=0.651;AC=16;AF=0.286;AN=56;BaseQRankSum=4.760;DP=409;FS=3.639;HRun=1;HaplotypeScore=107.6291;InbreedingCoeff=0.4204;MQ=42.71;MQ0=13;MQRankSum=-6.711;QD=17.73;ReadPosRankSum=0.941;VQSLOD=4.0306;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,8:11:10.85:131,11,0	0/0:7,0:7:21.07:0,21,336	0/0:21,0:4:10.85:0,11,151	0/0:27,0:11:28.90:0,29,416	0/0:18,0:18:17.64:0,18,285	0/0:19,0:19:24.08:0,24,382	0/0:28,0:28:29.81:0,30,479	0/1:5,3:8:99:131,0,122	1/1:0,7:7:18.06:251,18,0	0/0:19,0:18:54.17:0,54,825	0/0:10,0:10:30.08:0,30,455	0/0:16,0:16:24.08:0,24,383	0/0:28,0:28:51.17:0,51,813	0/0:16,0:16:30.10:0,30,462	0/0:15,0:15:15.05:0,15,239	0/0:14,0:14:39.13:0,39,624	0/1:7,7:14:76.59:147,0,77	0/1:4,3:7:70.83:71,0,127	0/1:5,4:4:35.95:114,0,36	1/1:0,14:14:24.08:335,24,0	1/1:5,8:13:11.60:166,12,0	0/0:20,0:20:28.91:0,29,434	0/0:8,0:8:14.81:0,15,216	0/0:19,0:18:15.05:0,15,239	0/0:9,0:9:13.53:0,14,166	0/1:6,13:19:99:488,0,159	0/1:1,10:11:19.91:305,0,20	1/1:0,2:2:6.02:83,6,0
chr10	110290408	.	ACGGG	A	416.81	PASS	AB=0.948;AC=24;AF=0.429;AN=56;BaseQRankSum=7.077;DP=334;FS=5.716;HRun=0;HaplotypeScore=96.1533;InbreedingCoeff=-0.0485;MQ=46.04;MQ0=9;MQRankSum=-3.663;QD=1.72;ReadPosRankSum=2.943;VQSLOD=0.7857;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:1.82:0,2,53	0/0:4,0:4:12.02:0,12,222	0/0:18,0:5:13.29:0,13,337	0/0:19,0:8:24.06:0,24,536	0/1:15,0:15:0:1,0,0	0/1:16,0:16:9.22:9,0,66	0/1:25,0:25:14.69:15,0,42	0/0:7,0:7:17.95:0,18,220	0/1:3,2:5:37.86:62,0,38	0/0:17,0:16:48.16:0,48,1185	0/0:7,0:7:21.07:0,21,501	0/1:17,0:17:11.52:12,0,91	1/1:22,0:22:3.71:87,4,0	1/1:14,0:14:16.27:75,16,0	1/1:15,0:15:8.06:48,8,0	0/0:11,0:11:33.08:0,33,882	0/1:12,0:12:8.65:9,0,121	0/1:5,1:6:9.72:10,0,94	0/1:6,0:3:3.04:3,0,48	1/1:6,2:8:3.01:37,3,0	0/1:10,0:10:14.87:15,0,41	0/1:19,0:19:9.33:9,0,109	0/1:5,0:5:11.97:19,0,12	1/1:16,0:15:3.64:16,4,0	0/1:7,0:7:7.81:8,0,30	0/1:14,2:16:89.86:90,0,303	0/1:7,2:9:41.75:54,0,42	0/0:1,0:1:2.60:0,3,10
chr10	110290411	.	G	GA	318.22	PASS	AB=0.880;AC=13;AF=0.232;AN=56;BaseQRankSum=4.178;DP=326;FS=10.654;HRun=0;HaplotypeScore=91.0921;InbreedingCoeff=-0.1463;MQ=45.63;MQ0=3;MQRankSum=-3.807;QD=2.37;ReadPosRankSum=0.265;VQSLOD=1.9099;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:4,3:7:29.82:65,0,30	0/0:3,0:3:9.03:0,9,123	0/0:15,0:6:16.78:0,17,189	0/0:17,0:8:24.07:0,24,311	0/1:13,1:14:0.11:1,0,0	0/0:16,0:16:15.02:0,15,160	0/1:24,0:24:37.46:37,0,48	0/1:7,2:9:95.12:95,0,141	0/1:6,0:6:16.63:17,0,110	0/0:17,0:16:48.05:0,48,625	0/0:7,0:7:21.07:0,21,290	0/0:17,0:17:18.02:0,18,190	0/0:21,0:21:23.90:0,24,199	0/0:14,0:14:19.55:0,20,174	0/0:14,0:14:5.99:0,6,51	0/0:10,0:10:30.10:0,30,420	0/0:11,2:13:15.35:0,15,182	0/1:4,2:6:37.34:37,0,74	0/0:8,0:4:9.01:0,9,121	1/1:10,0:10:2.54:14,3,0	0/1:5,4:9:25.08:25,0,46	0/1:17,0:17:8.86:9,0,114	0/0:4,0:4:2.94:0,3,37	0/0:13,0:12:2.86:0,3,23	0/1:7,0:7:24.53:25,0,29	0/1:14,2:16:85.16:85,0,376	0/1:8,1:9:51.59:52,0,66	0/0:3,0:3:5.05:0,5,47
chr10	110290413	.	AGCAC	A	648.82	PASS	AB=0.914;AC=22;AF=0.393;AN=56;BaseQRankSum=7.084;DP=317;FS=3.559;HRun=0;HaplotypeScore=91.9343;InbreedingCoeff=0.2734;MQ=45.66;MQ0=1;MQRankSum=-6.433;QD=3.34;ReadPosRankSum=4.258;VQSLOD=1.1592;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:1.81:0,2,57	0/0:3,0:3:6.02:0,6,137	0/0:14,0:6:15.05:0,15,403	0/0:17,0:8:24.08:0,24,550	0/1:14,0:14:0:1,0,0	0/1:16,0:15:36.85:37,0,37	0/1:22,0:22:0.01:0,0,0	0/0:9,0:9:20.94:0,21,307	0/1:4,2:6:42.89:72,0,43	0/0:16,0:15:45.15:0,45,1185	0/0:7,0:7:18.03:0,18,382	1/1:15,0:15:8.91:70,9,0	1/1:21,0:21:21.02:196,21,0	1/1:14,0:14:20.78:166,21,0	1/1:14,0:14:5.37:36,5,0	0/0:10,0:10:30.10:0,30,829	0/1:13,0:13:18.63:19,0,126	0/1:5,1:6:22.33:22,0,60	0/0:9,0:6:10.21:0,10,208	1/1:8,2:10:2.85:34,3,0	0/0:9,0:9:2.20:0,2,48	0/0:15,0:15:5.61:0,6,55	0/0:4,0:4:1.24:0,1,4	1/1:11,0:10:3:28,3,0	1/1:7,0:7:2.77:28,3,0	0/1:14,2:16:53.84:54,0,313	0/1:7,2:9:10.38:51,0,10	0/0:3,0:3:5.67:0,6,74
chr10	110290414	.	GCACGGGAGC	G	3535.01	PASS	AB=0.892;AC=29;AF=0.518;AN=56;BaseQRankSum=6.237;DP=315;FS=0.659;HRun=0;HaplotypeScore=97.0480;InbreedingCoeff=0.0569;MQ=45.63;MQ0=1;MQRankSum=-6.630;QD=15.85;ReadPosRankSum=2.675;VQSLOD=1.6843;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:7:36.67:76,0,37	0/0:2,0:2:6.02:0,6,179	0/0:14,0:6:15.05:0,15,454	0/0:18,0:8:23.65:0,24,595	1/1:1,13:14:2.91:24,3,0	0/1:3,13:15:25.04:242,0,25	0/0:2,19:21:5.75:0,6,53	0/1:9,0:9:26.14:26,0,150	0/1:6,0:6:55.87:99,0,56	0/0:16,0:15:45.15:0,45,1544	0/0:7,0:7:18.03:0,18,550	1/1:0,14:14:9.03:279,9,0	1/1:0,20:20:21.07:684,21,0	1/1:0,14:14:21.07:652,21,0	1/1:0,13:13:6.02:164,6,0	0/0:11,0:11:33.11:0,33,1296	0/1:8,5:13:99:142,0,125	0/1:5,0:5:38.88:162,0,39	0/1:10,0:7:64.25:64,0,119	0/1:10,0:10:17.40:63,0,17	1/1:9,0:9:5.17:24,5,0	0/1:2,13:15:11.69:230,0,12	1/1:0,4:4:6:89,6,0	1/1:1,10:10:3.01:98,3,0	1/1:0,6:6:6.02:166,6,0	0/1:16,0:16:99:121,0,312	0/1:11,0:11:20.40:130,0,20	0/0:3,0:3:5.79:0,6,56
chr10	110290419	.	G	GA	698.10	PASS	AB=0.857;AC=24;AF=0.429;AN=56;BaseQRankSum=3.899;DP=295;FS=0.000;HRun=0;HaplotypeScore=81.8660;InbreedingCoeff=0.2437;MQ=45.96;MQ0=1;MQRankSum=-5.406;QD=4.04;ReadPosRankSum=-0.570;VQSLOD=3.0705;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,1:4:6:0,6,58	0/0:2,0:2:3.01:0,3,42	0/0:14,0:6:15.05:0,15,210	0/0:19,0:10:21.07:0,21,273	0/1:14,0:14:0:1,0,0	1/1:14,0:13:4.85:51,5,0	0/0:22,0:22:8.92:0,9,82	0/0:9,0:9:19.50:0,20,190	0/1:3,2:5:0.58:87,0,1	0/0:14,0:14:42.11:0,42,529	0/0:4,0:4:12.04:0,12,168	1/1:17,0:17:4.46:42,4,0	0/1:20,0:20:6.29:16,0,6	1/1:14,0:14:8.76:87,9,0	1/1:13,0:13:5.79:38,6,0	0/0:11,0:11:33.10:0,33,444	1/1:8,2:10:4.47:65,4,0	0/0:3,1:4:4.99:0,5,25	0/1:9,2:10:75.96:76,0,176	0/1:7,1:8:30.17:30,0,40	0/0:8,1:9:1.25:0,1,23	1/1:13,0:13:8.99:75,9,0	1/1:4,0:4:2.99:24,3,0	0/0:10,0:10:1.90:0,2,6	1/1:6,0:6:0.77:22,1,0	0/1:9,4:13:99:171,0,102	0/1:7,1:8:36.37:36,0,73	0/1:2,1:3:35.95:42,0,36
chr10	110290422	.	GC	G	609.27	PASS	AB=0.937;AC=25;AF=0.446;AN=56;BaseQRankSum=5.207;DP=300;FS=0.000;HRun=1;HaplotypeScore=86.0367;InbreedingCoeff=-0.0751;MQ=50.13;MQ0=1;MQRankSum=-4.933;QD=2.85;ReadPosRankSum=2.270;VQSLOD=-0.3408;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:5,1:6:35.80:36,0,36	0/0:2,0:2:3.01:0,3,48	0/1:14,0:7:3.30:3,0,205	0/0:17,1:11:14.27:0,14,376	1/1:14,0:14:2.95:24,3,0	0/1:15,0:14:4.23:19,0,4	0/0:22,0:22:8.68:0,9,102	0/1:7,3:10:63.75:64,0,226	0/1:4,1:5:33.94:34,0,78	0/0:13,0:13:36.11:0,36,551	0/0:4,0:4:12.04:0,12,192	1/1:17,0:18:8.13:40,8,0	1/1:20,0:20:20.59:124,21,0	1/1:14,0:14:18.35:93,18,0	0/1:13,0:13:5.43:12,0,5	0/0:10,0:10:30.07:0,30,432	0/1:10,0:10:8.31:8,0,63	0/1:4,0:4:17.83:18,0,29	0/1:9,3:11:99:114,0,217	0/1:8,1:9:33.49:33,0,44	0/1:9,0:9:4.68:5,0,32	0/1:13,0:13:24.57:32,0,25	0/1:4,0:4:8.72:18,0,9	1/1:10,0:10:2.94:18,3,0	0/1:6,0:6:4.04:12,0,4	0/0:13,0:13:28.51:0,29,325	0/1:7,1:8:68.68:69,0,80	0/0:4,0:4:5.90:0,6,95
chr10	110290439	.	GC	G	2089.49	PASS	AB=0.763;AC=25;AF=0.446;AN=56;BaseQRankSum=2.745;DP=310;FS=0.591;HRun=1;HaplotypeScore=89.6711;InbreedingCoeff=-0.2355;MQ=42.21;MQ0=9;MQRankSum=-6.195;QD=9.29;ReadPosRankSum=1.511;VQSLOD=1.2875;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:4,4:8:98.04:107,0,98	0/0:3,0:3:6.02:0,6,96	0/0:13,0:3:8.66:0,9,80	0/0:21,0:10:5.42:0,5,282	0/1:12,1:13:36.11:36,0,41	0/1:10,2:11:39:41,0,39	0/1:18,3:21:80.23:111,0,80	0/1:11,11:22:99:396,0,344	0/1:5,2:7:62.76:63,0,187	0/0:13,0:12:33.11:0,33,528	0/0:5,0:5:15.05:0,15,236	0/1:11,3:14:36.07:36,0,39	0/1:20,3:23:56.31:56,0,248	0/0:12,0:12:0.76:0,1,71	0/1:7,0:7:19.70:20,0,32	0/0:9,0:9:27.09:0,27,425	0/1:5,3:8:3.03:36,0,3	0/1:2,2:4:32.86:33,0,79	0/1:5,8:12:99:256,0,174	1/1:5,6:11:5.89:159,6,0	0/1:7,9:14:71.64:223,0,72	1/1:11,0:11:5.95:60,6,0	1/1:3,0:3:3.01:42,3,0	0/0:9,0:9:3.01:0,3,37	1/1:4,0:4:5.95:43,6,0	0/1:5,7:12:99:218,0,191	0/1:7,6:13:67.75:232,0,68	1/1:1,2:3:6.02:84,6,0
chr10	110290529	.	G	GAA	8478.17	PASS	AB=0.660;AC=40;AF=0.714;AN=56;BaseQRankSum=8.593;DP=397;FS=7.614;HRun=1;HaplotypeScore=167.6904;InbreedingCoeff=0.4305;MQ=48.82;MQ0=11;MQRankSum=-7.821;QD=26.17;ReadPosRankSum=2.859;VQSLOD=3.9149;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:21:24.96:449,25,0	0/0:14,0:14:42.13:0,42,621	0/0:18,0:8:24.06:0,24,334	0/0:16,0:12:30.10:0,30,404	1/1:2,8:9:23.39:164,23,0	1/1:0,14:14:42.13:527,42,0	1/1:0,11:11:33.11:428,33,0	1/1:3,10:12:33.04:408,33,0	1/1:1,13:14:9.10:279,9,0	0/0:22,0:19:54.17:0,54,807	0/0:3,0:3:3.01:0,3,46	1/1:1,19:20:54.13:660,54,0	1/1:0,12:13:36.11:459,36,0	1/1:1,9:10:30.03:343,30,0	1/1:0,21:21:57.18:708,57,0	0/1:12,1:12:5.40:5,0,362	0/1:1,7:8:22.88:202,0,23	0/1:5,6:11:17.07:211,0,17	0/1:10,10:15:53.66:352,0,54	1/1:3,8:11:20.20:242,20,0	1/1:6,12:17:27.44:346,27,0	1/1:1,14:15:44.36:436,44,0	0/1:2,7:9:21.04:197,0,21	1/1:2,9:9:2.62:166,3,0	1/1:0,16:16:42.13:517,42,0	1/1:1,24:25:69.18:897,69,0	0/1:5,8:13:32.37:283,0,32	1/1:1,5:5:15.05:198,15,0
chr10	110290535	.	AC	A	6472.45	PASS	AB=0.630;AC=43;AF=0.768;AN=56;BaseQRankSum=10.512;DP=393;FS=3.025;HRun=1;HaplotypeScore=168.1601;InbreedingCoeff=0.8242;MQ=53.20;MQ0=8;MQRankSum=-9.146;QD=20.81;ReadPosRankSum=2.885;VQSLOD=5.1611;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:21:34.85:414,35,0	0/0:14,0:14:42.14:0,42,665	0/0:16,0:9:27.09:0,27,429	0/0:18,0:14:42.03:0,42,602	1/1:4,9:12:24.07:322,24,0	1/1:0,14:14:41.96:358,42,0	1/1:1,11:12:35.84:283,36,0	1/1:1,10:11:30.01:277,30,0	1/1:0,13:13:21.84:170,22,0	0/0:18,0:18:54.15:0,54,831	0/0:3,0:3:3.01:0,3,48	1/1:2,19:21:53.90:441,54,0	1/1:0,13:13:35.94:305,36,0	1/1:1,9:10:29.17:239,29,0	1/1:3,21:24:59.90:511,60,0	0/0:12,1:12:7.72:0,8,371	1/1:4,7:11:6.99:134,7,0	1/1:2,7:9:15.02:148,15,0	0/1:7,10:14:5.22:227,0,5	1/1:3,8:11:21.58:259,22,0	1/1:2,13:14:20.70:167,21,0	1/1:1,15:16:44.90:459,45,0	1/1:2,7:9:24.04:273,24,0	1/1:0,11:9:6.18:101,6,0	1/1:1,16:17:44.82:361,45,0	1/1:0,24:24:66.05:606,66,0	1/1:3,9:12:15.08:285,15,0	1/1:0,6:5:15:132,15,0
chr10	110290720	.	C	CCT	15487.25	PASS	AB=0.691;AC=39;AF=0.696;AN=56;BaseQRankSum=-10.372;DP=677;FS=11.205;HRun=0;HaplotypeScore=91.0923;InbreedingCoeff=0.3849;MQ=69.43;MQ0=6;MQRankSum=-0.747;QD=26.66;ReadPosRankSum=1.785;VQSLOD=5.9011;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,17:27:42.14:672,42,0	0/0:11,0:11:21.02:0,21,229	0/0:28,0:25:29.17:0,29,280	0/1:31,0:19:5.78:6,0,178	0/1:10,16:27:99:693,0,105	1/1:12,17:29:51.17:815,51,0	1/1:11,13:24:12.03:748,12,0	1/1:10,14:25:7.05:530,7,0	0/1:3,18:21:47.74:755,0,48	0/0:20,0:20:39.11:0,39,457	0/0:13,0:13:30.09:0,30,355	1/1:6,14:20:24.99:561,25,0	1/1:7,18:26:45.14:696,45,0	1/1:6,11:18:33.96:653,34,0	1/1:6,20:28:51.17:815,51,0	0/0:19,1:23:2.65:0,3,461	1/1:7,27:34:83.50:1294,83,0	0/1:10,8:18:26.92:482,0,27	0/1:7,6:13:80.86:254,0,81	1/1:4,21:26:30.24:969,30,0	1/1:25,18:43:55.47:1208,55,0	1/1:11,17:27:9.17:635,9,0	1/1:6,11:18:30.57:481,31,0	1/1:17,13:30:51.17:800,51,0	0/1:16,8:25:99:258,0,110	0/1:8,21:30:5.32:894,0,5	1/1:10,13:24:33.54:804,34,0	1/1:2,10:13:18.96:466,19,0
chr10	110290820	.	GTT	G	19081.68	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=12.413;DP=613;FS=4.395;HRun=4;HaplotypeScore=146.6875;InbreedingCoeff=0.9994;MQ=81.15;MQ0=3;MQRankSum=-8.964;QD=39.59;ReadPosRankSum=4.574;VQSLOD=3.5135;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:57.19:839,57,0	0/0:13,0:13:39.13:0,39,731	0/0:27,0:27:78.27:0,78,1412	0/0:20,0:20:47.81:0,48,783	1/1:0,26:26:69.23:1001,69,0	1/1:0,33:33:81.27:1193,81,0	1/1:1,14:15:36.12:530,36,0	1/1:3,20:23:51.17:750,51,0	1/1:0,28:28:84.28:1236,84,0	0/0:23,0:23:69.24:0,69,1258	0/0:14,0:14:42.14:0,42,747	1/1:0,26:25:69.23:1015,69,0	1/1:0,20:20:57.19:839,57,0	1/1:0,16:16:45.15:662,45,0	1/1:1,21:22:63.21:928,63,0	0/0:34,0:34:99:0,102,1900	1/1:0,24:24:66.22:971,66,0	1/1:0,28:28:78.26:1145,78,0	1/1:3,7:10:27.09:397,27,0	1/1:4,16:19:57.17:810,57,0	1/1:1,17:18:45.15:663,45,0	1/1:2,20:22:60.20:876,60,0	1/1:0,23:22:66.22:964,66,0	1/1:0,19:19:57.19:839,57,0	1/1:0,16:16:48.16:700,48,0	1/1:3,25:28:28.06:1135,28,0	1/1:0,30:30:81.27:1192,81,0	1/1:0,9:9:27.09:397,27,0
chr10	110291057	.	CT	C	22471.32	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=5.653;DP=782;FS=6.962;HRun=3;HaplotypeScore=83.0546;InbreedingCoeff=0.9998;MQ=59.85;MQ0=0;MQRankSum=-0.056;QD=33.84;ReadPosRankSum=4.513;VQSLOD=5.2223;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,75:77:99:2305,187,0	0/0:12,0:12:33.10:0,33,459	0/0:20,0:16:42.14:0,42,593	0/0:15,0:11:29.37:0,29,341	1/1:2,31:33:96.30:1190,96,0	1/1:0,29:29:78.18:947,78,0	1/1:2,18:20:48.15:593,48,0	1/1:2,28:30:84.20:998,84,0	1/1:0,31:31:87.27:1076,87,0	0/0:18,0:18:51.15:0,51,698	0/0:25,0:25:72.24:0,72,1022	1/1:0,29:29:87.27:1078,87,0	1/1:0,20:20:48.15:595,48,0	1/1:0,19:19:57.18:706,57,0	1/1:2,29:31:81.25:1003,81,0	0/0:28,0:28:84.28:0,84,1209	1/1:1,31:32:92.50:1120,93,0	1/1:0,25:25:69.22:855,69,0	1/1:1,21:22:57.18:704,57,0	1/1:0,36:36:99:1263,102,0	1/1:0,55:55:99:1931,156,0	1/1:0,28:28:75.24:930,75,0	1/1:2,25:27:81.25:1003,81,0	1/1:3,21:24:60.19:744,60,0	1/1:0,23:23:69.22:853,69,0	1/1:0,28:28:84.24:1018,84,0	1/1:0,31:31:84.17:1040,84,0	1/1:0,14:14:42.13:520,42,0
chr10	110291689	.	GT	G	8786.46	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=9.927;DP=535;FS=7.680;HRun=11;HaplotypeScore=91.3573;InbreedingCoeff=0.9466;MQ=65.51;MQ0=0;MQRankSum=1.218;QD=19.57;ReadPosRankSum=1.128;VQSLOD=5.4311;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:22:44.94:369,45,0	0/0:12,0:14:35.75:0,36,341	0/0:9,0:9:7.18:0,7,105	0/0:5,0:4:5.23:0,5,35	1/1:1,19:20:56.89:462,57,0	1/1:1,22:24:64.95:523,65,0	1/1:1,7:8:17.97:148,18,0	1/1:6,18:25:55.91:443,56,0	1/1:0,18:18:53.94:443,54,0	0/0:18,0:18:48.10:0,48,495	0/0:20,2:22:23.46:0,23,447	1/1:0,17:17:47.94:394,48,0	1/1:2,17:19:41.95:345,42,0	1/1:2,10:12:26.96:222,27,0	1/1:1,20:22:58.97:474,59,0	0/0:17,1:18:29.48:0,29,512	1/1:4,18:23:35.92:483,36,0	1/1:8,15:23:12.98:313,13,0	1/1:2,15:16:41.91:340,42,0	1/1:1,22:24:59.91:492,60,0	1/1:13,10:25:45.99:351,46,0	1/1:2,13:16:37.98:301,38,0	1/1:2,20:23:52.86:425,53,0	1/1:3,13:16:38.93:317,39,0	1/1:2,27:29:74.91:615,75,0	1/1:3,27:31:50.92:611,51,0	1/1:4,26:30:71.88:591,72,0	1/1:1,4:5:14.98:123,15,0
chr10	110291781	.	T	TA	10964.37	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=10.320;DP=455;FS=0.476;HRun=7;HaplotypeScore=92.5474;InbreedingCoeff=0.9489;MQ=72.94;MQ0=0;MQRankSum=-2.643;QD=29.79;ReadPosRankSum=-0.694;VQSLOD=4.4977;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:75.23:906,75,0	0/0:11,0:11:30.05:0,30,290	0/0:8,0:8:2.63:0,3,78	0/0:12,0:11:20.34:0,20,179	1/1:3,18:21:54.16:647,54,0	1/1:2,19:21:60.18:725,60,0	1/1:2,15:17:39.12:469,39,0	1/1:7,14:21:13.15:442,13,0	1/1:1,7:8:21.06:250,21,0	0/0:28,0:27:75.10:0,75,719	0/0:21,0:21:63.07:0,63,597	1/1:4,9:13:30.08:351,30,0	1/1:4,9:13:27.08:326,27,0	1/1:3,9:12:30.08:348,30,0	1/1:5,15:20:45.08:523,45,0	0/0:7,0:7:15.02:0,15,145	1/1:3,23:26:63.19:760,63,0	1/1:1,15:16:45.14:544,45,0	1/1:1,14:15:42.13:507,42,0	1/1:3,8:11:27.08:322,27,0	1/1:4,13:17:39.12:471,39,0	1/1:3,5:8:18.05:208,18,0	1/1:3,19:22:57.17:684,57,0	1/1:4,8:12:30.09:362,30,0	1/1:3,10:13:30.09:359,30,0	1/1:5,21:26:66.19:787,66,0	1/1:4,14:17:51.16:615,51,0	1/1:0,10:10:30.09:359,30,0
chr10	110291869	.	GCTAGC	G	11899.08	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=4.292;DP=371;FS=17.228;HRun=0;HaplotypeScore=84.2412;InbreedingCoeff=0.9133;MQ=71.77;MQ0=0;MQRankSum=-3.662;QD=37.77;ReadPosRankSum=3.094;VQSLOD=3.6212;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,16:29:51.17:990,51,0	0/0:4,0:4:9.03:0,9,266	0/0:9,0:8:10.28:0,10,176	0/0:15,0:16:18.93:0,19,370	1/1:5,6:11:18.06:326,18,0	1/1:7,15:22:48.16:930,48,0	1/1:13,17:30:36.12:697,36,0	1/1:5,9:13:24.08:420,24,0	1/1:0,13:13:30.10:585,30,0	0/0:8,0:8:24.08:0,24,700	0/0:6,0:6:12.04:0,12,354	1/1:2,10:12:30.10:582,30,0	1/1:1,7:8:18.06:327,18,0	1/1:6,8:14:33.11:638,33,0	1/1:8,6:14:36.12:701,36,0	0/0:13,0:13:36.12:0,36,1029	1/1:5,15:20:45.15:877,45,0	1/1:4,8:12:30.08:544,30,0	1/1:5,7:11:18.06:351,18,0	1/1:2,8:10:24.08:448,24,0	1/1:7,9:16:9.03:172,9,0	1/1:4,5:9:11.71:233,12,0	1/1:1,2:3:6.02:117,6,0	1/1:1,20:21:51.18:994,51,0	1/1:0,9:9:18.06:347,18,0	1/1:4,11:15:33.11:643,33,0	1/1:7,11:18:42.14:818,42,0	1/1:1,2:3:9.03:159,9,0
chr10	110292020	.	G	GA	8138.02	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-0.627;DP=525;FS=7.467;HRun=8;HaplotypeScore=71.1621;InbreedingCoeff=0.9863;MQ=62.12;MQ0=5;MQRankSum=-1.661;QD=18.41;ReadPosRankSum=3.380;VQSLOD=4.6871;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,26:31:78.06:876,78,0	0/0:12,0:12:33.01:0,33,302	0/0:8,0:6:14.98:0,15,136	0/0:10,0:8:17.44:0,17,135	1/1:3,1:17:40.42:241,40,0	1/1:3,0:19:31.25:159,31,0	1/1:6,0:29:56.81:288,57,0	1/1:1,27:28:81.21:913,81,0	1/1:3,16:19:30.09:346,30,0	0/0:18,0:18:48.02:0,48,438	0/0:23,0:23:50.46:0,50,437	1/1:3,0:15:31.31:160,31,0	1/1:3,1:19:34.17:194,34,0	1/1:4,0:20:39.73:202,40,0	1/1:7,1:21:36.99:189,37,0	0/0:12,0:12:36.02:0,36,329	1/1:2,35:37:75.22:866,75,0	1/1:6,17:23:60.18:691,60,0	1/1:5,14:19:42.12:485,42,0	1/1:2,14:16:33.10:375,33,0	1/1:2,20:22:57.17:658,57,0	1/1:1,0:12:27.63:142,28,0	1/1:1,0:15:31.39:155,31,0	1/1:4,0:16:28.41:144,28,0	1/1:4,0:14:19.89:101,20,0	1/1:2,11:13:33.04:352,33,0	1/1:4,19:22:42.12:485,42,0	1/1:2,9:10:11.82:116,12,0
chr10	110292574	.	TG	T	16546.42	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=2.655;DP=610;FS=4.604;HRun=3;HaplotypeScore=63.8094;InbreedingCoeff=0.9630;MQ=90.01;MQ0=0;MQRankSum=-7.513;QD=33.63;ReadPosRankSum=5.050;VQSLOD=5.3011;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,42:44:99:1487,120,0	0/0:1,0:1:3.01:0,3,43	0/0:25,0:25:72.18:0,72,960	0/0:27,0:27:74.89:0,75,984	1/1:0,25:25:72.23:891,72,0	1/1:1,15:16:45.14:558,45,0	1/1:0,18:18:51.16:632,51,0	1/1:1,36:37:99:1289,105,0	1/1:0,16:16:42.13:520,42,0	0/0:22,0:22:66.21:0,66,933	0/0:24,0:24:72.23:0,72,1015	1/1:1,19:20:57.18:707,57,0	1/1:1,24:25:66.21:818,66,0	1/1:0,16:16:45.14:557,45,0	1/1:0,27:27:60.19:744,60,0	0/0:19,0:19:57.19:0,57,820	1/1:0,14:14:42.06:501,42,0	1/1:0,16:16:48.15:595,48,0	1/1:1,17:18:51.16:632,51,0	1/1:0,22:22:60.19:742,60,0	1/1:0,43:43:99:1450,117,0	1/1:0,17:17:51.16:632,51,0	1/1:0,18:18:51.16:632,51,0	1/1:1,26:27:72.23:893,72,0	1/1:0,15:15:39.12:483,39,0	1/1:2,24:26:72.23:891,72,0	1/1:1,24:25:51.16:632,51,0	1/1:0,7:7:21.07:260,21,0
chr10	110293534	.	C	CTTT	22541.66	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=8.370;DP=578;FS=0.845;HRun=4;HaplotypeScore=154.7952;InbreedingCoeff=0.9826;MQ=65.10;MQ0=1;MQRankSum=-8.011;QD=50.54;ReadPosRankSum=2.735;VQSLOD=3.7529;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,20:29:72.23:1410,72,0	0/0:10,0:10:30.09:0,30,434	0/0:36,0:28:15.90:0,16,650	0/0:20,0:13:29.02:0,29,390	1/1:7,11:18:42.09:824,42,0	1/1:0,15:15:42.14:904,42,0	1/1:2,15:17:48.16:945,48,0	1/1:12,10:21:60.19:1077,60,0	1/1:5,8:13:36.08:668,36,0	0/0:28,0:28:81.24:0,81,1168	0/0:18,0:18:48.16:0,48,736	1/1:9,15:22:54.17:1062,54,0	1/1:4,9:14:39.12:751,39,0	1/1:9,14:23:60.18:1137,60,0	1/1:5,16:21:63.16:1198,63,0	0/0:19,0:19:57.17:0,57,826	1/1:4,19:23:49.72:1035,50,0	1/1:7,15:21:48.14:974,48,0	1/1:11,11:21:45.15:911,45,0	1/1:5,20:25:72.20:1433,72,0	1/1:4,13:17:48.16:955,48,0	1/1:3,21:25:75.24:1470,75,0	1/1:1,7:8:24.08:496,24,0	1/1:2,15:17:35.77:782,36,0	1/1:5,18:20:57.20:1196,57,0	1/1:11,12:23:8.16:951,8,0	1/1:10,18:27:87.25:1642,87,0	1/1:5,10:15:36.12:720,36,0
chr10	110293537	.	TTC	T	12954.64	PASS	AB=0.978;AC=42;AF=0.750;AN=56;BaseQRankSum=11.305;DP=578;FS=10.769;HRun=0;HaplotypeScore=166.9513;InbreedingCoeff=0.8144;MQ=63.71;MQ0=3;MQRankSum=-4.525;QD=29.18;ReadPosRankSum=6.046;VQSLOD=5.9750;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,1:29:61.31:818,61,0	0/0:10,0:10:30.10:0,30,535	0/0:35,0:27:43.17:0,43,801	0/0:22,0:14:11.20:0,11,508	1/1:16,2:18:3.71:469,4,0	1/1:15,0:15:42.12:500,42,0	1/1:17,0:17:48.12:540,48,0	1/1:15,6:20:40.92:653,41,0	1/1:11,2:13:19.50:378,19,0	0/0:29,0:28:84.25:0,84,1400	0/0:18,0:18:54.17:0,54,956	1/1:25,1:24:29.80:597,30,0	1/1:14,0:14:23.40:424,23,0	1/1:19,4:23:47.89:717,48,0	1/1:20,2:22:49.54:702,50,0	0/0:19,0:19:57.17:0,57,983	1/1:22,1:23:27.78:571,28,0	1/1:18,4:20:32.57:569,33,0	1/1:17,2:18:45.12:564,45,0	1/1:20,5:25:71.38:856,71,0	1/1:16,1:17:48.14:599,48,0	1/1:25,1:26:74:824,74,0	1/1:8,0:8:24.07:280,24,0	1/1:15,0:15:35.98:429,36,0	1/1:24,0:21:44.49:692,44,0	0/1:21,1:22:82.17:515,0,82	1/1:25,2:27:67.78:924,68,0	0/1:15,0:15:0.61:331,0,1
chr10	110293544	.	CTT	C	11594.19	PASS	AB=0.573;AC=40;AF=0.714;AN=56;BaseQRankSum=12.155;DP=578;FS=0.402;HRun=6;HaplotypeScore=170.1447;InbreedingCoeff=0.6954;MQ=61.17;MQ0=6;MQRankSum=-8.209;QD=26.41;ReadPosRankSum=3.490;VQSLOD=2.8503;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,23:27:65.72:691,66,0	0/0:10,0:10:30.10:0,30,513	0/0:37,1:25:48.94:0,49,552	0/0:20,0:12:29.30:0,29,479	1/1:6,14:19:6.78:421,7,0	1/1:2,13:15:42.08:488,42,0	1/1:2,16:17:44.98:477,45,0	1/1:7,14:18:44.87:465,45,0	1/1:3,11:13:30.07:355,30,0	0/0:30,0:26:72.24:0,72,1238	0/0:20,0:20:57.20:0,57,1011	1/1:4,18:20:50.64:554,51,0	0/1:2,10:12:3.15:351,0,3	1/1:6,16:22:47.93:551,48,0	1/1:5,16:21:50.87:562,51,0	0/0:20,0:19:54.18:0,54,948	1/1:7,17:24:56.58:694,57,0	0/1:7,15:20:0.84:455,0,1	1/1:6,12:16:35.91:395,36,0	1/1:7,20:27:63.17:731,63,0	1/1:4,13:17:41.25:483,41,0	1/1:3,23:25:67.57:736,68,0	0/1:4,8:11:45.01:259,0,45	1/1:4,12:16:39.50:446,39,0	1/1:0,23:20:57.17:691,57,0	0/1:4,17:20:37.62:586,0,38	1/1:5,22:27:36.06:771,36,0	1/1:1,12:13:35.98:432,36,0
chr10	110294025	.	CGT	C	9955.24	PASS	AB=0.666;AC=33;AF=0.589;AN=56;BaseQRankSum=6.334;DP=1365;FS=42.007;HRun=0;HaplotypeScore=559.0689;InbreedingCoeff=0.0354;MQ=40.38;MQ0=18;MQRankSum=0.195;QD=8.73;ReadPosRankSum=4.734;VQSLOD=2.8119;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,15:39:35.60:417,36,0	0/0:16,0:16:36.11:0,36,581	0/0:55,0:22:37.30:0,37,496	0/0:66,0:30:63.18:0,63,953	1/1:8,20:34:22.24:307,22,0	1/1:10,14:30:23.95:308,24,0	1/1:12,10:24:17.73:227,18,0	1/1:36,3:33:2.62:189,3,0	0/1:20,18:41:45.20:388,0,45	0/0:63,0:63:99:0,169,2682	0/0:24,0:24:66.23:0,66,1096	0/1:24,33:66:6.49:520,0,6	0/1:22,31:71:99:807,0,145	0/1:34,24:78:99:488,0,100	0/1:38,33:92:62.52:690,0,63	0/1:31,4:34:25.86:26,0,1168	1/1:16,9:29:7.33:435,7,0	1/1:9,22:30:30.78:490,31,0	0/1:15,5:14:68.71:224,0,69	0/1:20,9:41:97.61:199,0,98	1/1:43,73:115:68.34:1061,68,0	0/1:29,17:67:99:394,0,129	0/1:17,12:41:6.60:212,0,7	1/1:13,28:48:20.59:269,21,0	1/1:6,20:45:30.92:388,31,0	0/1:48,36:93:99:1172,0,673	0/1:16,21:41:79.94:512,0,80	0/1:5,7:15:9.99:232,0,10
chr10	110294067	.	TGTGTATATGTGC	T	6231.36	PASS	AB=0.866;AC=25;AF=0.446;AN=56;BaseQRankSum=11.224;DP=1071;FS=32.849;HRun=0;HaplotypeScore=511.9398;InbreedingCoeff=-0.1693;MQ=34.90;MQ0=24;MQRankSum=-7.148;QD=8.33;ReadPosRankSum=-2.246;VQSLOD=0.7846;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,2:33:42.52:63,0,43	0/0:15,0:15:45.12:0,45,1709	0/0:52,0:21:60.06:0,60,1568	0/0:68,0:26:69.22:0,69,1818	0/0:25,8:33:1.04:0,1,2	0/0:30,5:35:5.73:0,6,75	0/1:30,1:30:1.83:2,0,305	0/1:44,0:35:99:152,0,2032	0/1:32,8:40:99:142,0,164	0/0:49,0:49:99:0,144,6695	0/0:25,0:24:69.24:0,69,3340	1/1:40,13:53:34.69:247,35,0	0/1:32,15:47:99:860,0,193	0/1:33,14:47:55.76:89,0,56	0/1:51,11:62:67.61:130,0,68	0/0:46,0:46:66.48:0,66,5090	0/1:30,1:30:99:197,0,343	0/1:15,2:17:99:302,0,572	0/1:16,13:22:99:927,0,432	0/1:21,3:23:42.32:42,0,57	0/1:63,4:63:30.79:31,0,287	1/1:32,4:36:7.85:111,8,0	1/1:12,6:18:2.11:15,2,0	1/1:35,5:40:5.19:39,5,0	1/1:23,7:30:4.73:47,5,0	0/1:49,10:57:99:1827,0,874	0/1:19,12:31:99:884,0,204	0/1:8,1:9:99:125,0,107
chr10	110294069	.	TGTATATGTGC	T	4541.14	PASS	AB=0.989;AC=24;AF=0.429;AN=56;BaseQRankSum=12.626;DP=1065;FS=22.697;HRun=0;HaplotypeScore=496.8546;InbreedingCoeff=-0.1399;MQ=34.64;MQ0=21;MQRankSum=-7.040;QD=6.43;ReadPosRankSum=-3.201;VQSLOD=0.9097;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:54.23:64,0,54	0/0:15,0:15:45.12:0,45,1723	0/0:53,0:22:63.11:0,63,1695	0/0:71,0:29:81.20:0,81,2056	0/0:29,3:32:1.05:0,1,2	0/0:33,2:35:4.74:0,5,73	0/0:34,0:33:10.44:0,10,347	0/1:44,0:35:47.68:48,0,2313	0/1:40,0:40:99:125,0,139	0/0:49,0:49:99:0,144,6287	0/0:25,0:24:72.25:0,72,3115	1/1:51,3:54:34.23:310,34,0	0/1:42,2:44:99:666,0,162	0/1:47,1:48:57.92:89,0,58	0/1:60,1:62:74.18:135,0,74	0/0:45,0:45:66.48:0,66,4853	0/1:29,1:30:99:104,0,433	0/1:16,0:16:99:233,0,657	0/1:30,0:23:99:585,0,409	0/1:22,1:22:41.05:42,0,41	0/1:63,0:59:33.31:33,0,252	1/1:33,3:36:8.59:113,9,0	1/1:19,0:19:1.63:15,2,0	1/1:39,0:39:5.71:40,6,0	1/1:29,1:30:4.32:46,4,0	0/1:56,0:54:99:1197,0,866	0/1:31,0:31:99:556,0,134	0/1:9,0:9:90.54:140,0,91
chr10	110294071	.	T	TGC	796.27	PASS	AB=0.966;AC=17;AF=0.304;AN=56;BaseQRankSum=8.811;DP=1008;FS=17.981;HRun=0;HaplotypeScore=412.7320;InbreedingCoeff=-0.1647;MQ=34.73;MQ0=21;MQRankSum=-3.907;QD=1.52;ReadPosRankSum=-0.423;VQSLOD=-0.0542;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,4:30:2.65:0,3,67	0/0:15,0:15:45.15:0,45,702	0/0:53,0:22:60.06:0,60,802	0/0:73,0:30:74.50:0,75,1010	0/1:32,0:32:0.60:1,0,1	0/0:34,0:34:3.20:0,3,48	0/0:34,0:33:13.27:0,13,229	0/1:42,2:36:38.17:38,0,1003	0/0:34,2:36:1.89:0,2,102	0/0:50,0:50:99:0,144,2297	0/0:24,0:24:72.22:0,72,1143	0/1:49,1:50:14.20:14,0,26	0/1:40,0:40:89.69:90,0,199	0/0:42,0:42:2.78:0,3,48	0/1:53,0:53:12.50:13,0,51	0/0:43,0:43:99:0,114,1794	0/1:27,2:29:82.41:82,0,253	0/1:12,2:15:53.67:54,0,240	0/1:28,0:21:99:118,0,315	0/0:19,0:18:1.90:0,2,47	0/1:57,5:58:7.01:7,0,131	0/0:30,0:30:3.11:0,3,22	0/1:16,0:16:0.27:0,0,0	1/1:38,0:38:2.66:7,3,0	1/1:29,0:29:3.33:26,3,0	0/1:47,2:47:99:310,0,754	0/1:29,1:30:99:120,0,246	0/1:9,0:9:57.16:57,0,111
chr10	110294075	.	TGTGC	T	1664.85	PASS	AB=0.991;AC=20;AF=0.357;AN=56;BaseQRankSum=13.620;DP=1017;FS=44.737;HRun=0;HaplotypeScore=423.2358;InbreedingCoeff=-0.0461;MQ=34.03;MQ0=21;MQRankSum=-8.828;QD=2.99;ReadPosRankSum=-2.227;VQSLOD=0.0695;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,1:29:44.20:44,0,69	0/0:13,0:13:39.09:0,39,959	0/0:57,0:24:59.96:0,60,1267	0/0:76,0:33:86.32:0,86,1678	0/0:33,0:33:1.17:0,1,2	0/0:33,0:33:1.85:0,2,45	0/0:39,0:38:16.26:0,16,223	0/0:48,0:39:88.68:0,89,1564	0/1:38,0:38:60.64:61,0,90	0/0:49,0:49:99:0,141,3166	0/0:23,0:23:66.18:0,66,1581	1/1:49,0:49:30.60:188,31,0	0/1:40,0:40:31.54:253,0,32	0/1:41,0:41:1.85:49,0,2	0/1:52,0:52:67.97:106,0,68	0/0:43,0:43:99:0,105,2583	0/1:27,0:27:48:48,0,328	0/1:14,1:15:89.38:89,0,472	0/1:30,0:22:99:173,0,324	0/0:19,0:18:3.76:0,4,19	0/1:60,0:56:33.66:34,0,53	1/1:30,0:30:2.55:16,3,0	1/1:18,0:18:2.63:16,3,0	1/1:33,2:35:2.88:17,3,0	0/0:27,0:27:0.86:0,1,2	0/1:51,1:50:99:470,0,429	0/1:31,0:31:40.42:216,0,40	0/1:9,0:9:10.45:44,0,10
chr10	110294077	.	TGC	T	2281.92	PASS	AB=0.954;AC=28;AF=0.500;AN=56;BaseQRankSum=12.940;DP=975;FS=4.980;HRun=0;HaplotypeScore=389.5257;InbreedingCoeff=0.2380;MQ=34.05;MQ0=22;MQRankSum=-8.495;QD=3.78;ReadPosRankSum=-2.366;VQSLOD=0.9482;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,4:25:44.41:48,0,44	0/0:13,0:13:39.09:0,39,686	0/0:57,0:23:59.66:0,60,929	0/0:74,0:33:88.02:0,88,1106	0/0:30,1:31:0.84:0,1,2	0/0:32,1:33:2.35:0,2,25	0/1:40,0:39:40.09:40,0,121	0/1:46,0:38:99:102,0,904	0/1:31,6:37:29.57:107,0,30	0/0:50,0:50:99:0,118,2313	0/0:22,0:22:66.17:0,66,1127	1/1:38,7:45:31.14:201,31,0	1/1:34,5:39:36.83:285,37,0	1/1:38,1:39:17.41:89,17,0	0/1:43,4:47:32.52:120,0,33	0/0:40,1:41:99:0,105,1860	0/0:26,1:27:11.81:0,12,229	0/1:14,0:14:50.68:51,0,315	0/1:32,0:23:99:175,0,172	1/1:17,0:16:1.88:20,2,0	1/1:57,0:53:16.27:121,16,0	1/1:23,3:26:1.55:15,2,0	1/1:16,1:17:2.44:16,2,0	1/1:33,1:34:4.88:24,5,0	0/0:23,0:23:0.12:0,0,1	0/1:51,1:50:99:609,0,144	1/1:28,1:29:53:345,53,0	1/1:3,2:5:9.43:96,9,0
chr10	110294079	.	CGT	C	2062.32	PASS	AB=0.777;AC=22;AF=0.393;AN=56;BaseQRankSum=9.473;DP=982;FS=4.213;HRun=0;HaplotypeScore=386.9249;InbreedingCoeff=0.0861;MQ=34.03;MQ0=22;MQRankSum=-7.825;QD=3.62;ReadPosRankSum=1.569;VQSLOD=1.0829;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,4:30:1.95:2,0,47	0/0:13,0:13:36.12:0,36,616	0/0:59,0:24:55.06:0,55,868	0/0:73,0:34:72.14:0,72,1060	0/0:13,17:30:1.41:0,1,3	0/0:15,17:32:3.27:0,3,39	0/1:20,20:39:93.51:100,0,94	0/1:28,20:40:99:329,0,872	0/1:21,16:37:38.38:104,0,38	0/0:51,0:51:99:0,129,2020	0/0:21,0:21:57.18:0,57,949	0/1:31,16:47:34.11:36,0,34	1/1:26,13:39:17.99:240,18,0	1/1:20,17:37:3.46:40,3,0	0/1:24,23:49:43.22:44,0,43	0/0:39,0:39:99:0,99,1655	0/0:23,3:26:28.23:0,28,301	0/1:14,0:14:41.11:41,0,279	0/1:29,4:23:99:132,0,217	1/1:8,8:15:2.03:38,2,0	1/1:51,7:55:8.10:130,8,0	0/0:19,7:26:0.90:0,1,2	0/0:13,4:17:0.14:0,0,1	1/1:30,4:34:1.62:7,2,0	0/0:13,11:24:0.93:0,1,2	0/1:32,19:50:99:673,0,240	0/1:22,8:29:2.71:233,0,3	1/1:3,1:4:2.25:69,2,0
chr10	110294110	.	GTA	G	49.74	PASS	AB=0.982;AC=10;AF=0.179;AN=56;BaseQRankSum=4.648;DP=1041;FS=16.511;HRun=0;HaplotypeScore=349.1547;InbreedingCoeff=-0.0302;MQ=33.23;MQ0=36;MQRankSum=-1.726;QD=0.18;ReadPosRankSum=-4.004;VQSLOD=0.6862;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:9.77:0,10,152	0/0:14,0:14:42.14:0,42,777	0/0:59,0:15:44.92:0,45,737	0/0:65,0:24:69.10:0,69,1115	0/0:25,0:28:2.98:0,3,22	1/1:35,0:36:2.38:19,2,0	0/0:54,2:53:23.48:0,23,375	0/0:71,1:59:99:0,108,1475	0/0:45,0:45:22.51:0,23,249	0/0:39,0:35:65.56:0,66,1692	0/0:23,0:23:27.51:0,28,923	0/1:40,0:40:14.63:15,0,101	0/0:40,0:39:1.93:0,2,371	0/0:35,0:34:10.25:0,10,116	0/0:52,0:52:21.26:0,21,220	0/0:40,0:39:99:0,102,1859	0/0:33,0:33:2.77:0,3,287	0/1:15,0:15:2.11:2,0,264	0/0:20,0:17:37.91:0,38,517	0/0:15,1:15:2.65:0,3,47	0/0:63,1:57:2.13:0,2,178	0/1:42,2:44:68.38:77,0,68	0/1:18,0:18:24.15:33,0,24	0/1:37,1:38:14.33:14,0,59	0/0:22,1:24:0.02:0,0,1	0/1:47,1:48:0.39:0,0,1144	0/1:24,1:24:0.14:0,0,382	0/1:6,0:6:4.94:5,0,85
chr10	110294116	.	GTA	G	651.64	PASS	AB=0.940;AC=22;AF=0.393;AN=56;BaseQRankSum=6.277;DP=1016;FS=28.045;HRun=0;HaplotypeScore=324.3135;InbreedingCoeff=-0.0931;MQ=33.46;MQ0=36;MQRankSum=-0.061;QD=1.03;ReadPosRankSum=-5.041;VQSLOD=0.5549;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:39,3:42:2.31:2,0,53	0/0:13,0:13:39.13:0,39,693	0/0:55,0:12:32.98:0,33,560	0/0:61,0:21:59.76:0,60,981	0/1:27,0:27:12.19:18,0,12	1/1:32,1:32:0.31:2,0,0	0/1:53,2:51:16.04:16,0,205	0/0:64,1:50:65.06:0,65,1375	0/1:35,8:43:27.24:27,0,80	0/0:40,0:36:52.51:0,53,1751	0/0:23,0:23:41.87:0,42,810	0/1:37,0:37:6.18:33,0,6	0/1:38,0:37:12.52:13,0,164	0/0:34,0:33:3.57:0,4,21	0/0:52,0:52:9.18:0,9,79	0/0:40,0:39:99:0,99,1773	0/1:30,4:34:65.81:81,0,66	0/1:15,2:16:0.17:98,0,0	0/1:13,2:14:27.84:28,0,120	0/1:14,4:17:3.99:39,0,4	0/1:68,0:61:16.07:22,0,16	0/1:44,2:46:21.88:101,0,22	1/1:18,0:18:9.27:65,9,0	1/1:43,0:43:4.20:66,4,0	0/1:20,1:21:0.19:0,0,0	0/1:46,3:48:99:182,0,553	0/1:22,1:22:1.07:1,0,120	0/1:6,0:6:8.10:8,0,50
chr10	110294118	.	A	ATG	2083.03	PASS	AB=0.990;AC=27;AF=0.482;AN=56;BaseQRankSum=8.749;DP=1015;FS=8.255;HRun=0;HaplotypeScore=312.2378;InbreedingCoeff=0.1310;MQ=33.78;MQ0=37;MQRankSum=-2.805;QD=2.80;ReadPosRankSum=-0.462;VQSLOD=0.7668;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:43,2:44:0.88:1,0,15	0/0:13,0:13:39.13:0,39,519	0/0:53,0:11:29.57:0,30,355	0/0:59,0:21:45.13:0,45,563	0/1:27,0:27:2.22:13,0,2	1/1:29,0:30:2.30:16,2,0	0/1:53,0:49:14.24:143,0,14	0/1:65,0:50:99:219,0,482	1/1:44,0:44:7.17:95,7,0	0/0:41,0:37:98.28:0,98,1275	0/0:25,0:25:16.33:0,16,475	0/1:36,0:36:13.67:14,0,14	0/1:39,0:38:24.28:193,0,24	1/1:34,0:33:3.62:37,4,0	0/1:54,0:54:28.75:29,0,31	0/0:41,0:40:96.30:0,96,1279	0/1:28,0:28:3.08:3,0,31	0/0:16,0:15:0.99:0,1,3	0/1:15,0:13:60.11:97,0,60	0/0:22,0:21:0.10:0,0,0	1/1:68,1:62:19.56:110,20,0	1/1:44,0:44:9.12:89,9,0	1/1:17,0:17:9.31:59,9,0	1/1:42,0:42:14.06:107,14,0	0/1:20,0:21:0.01:0,0,0	0/1:51,0:50:68.85:782,0,69	0/1:21,1:21:2:176,0,2	0/1:6,0:6:4.01:62,0,4
chr10	110294122	.	GTA	G	1744.04	PASS	AB=0.992;AC=29;AF=0.518;AN=56;BaseQRankSum=7.091;DP=1023;FS=12.145;HRun=0;HaplotypeScore=311.9702;InbreedingCoeff=0.0893;MQ=33.64;MQ0=39;MQRankSum=-2.467;QD=2.32;ReadPosRankSum=-1.357;VQSLOD=0.5945;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,4:45:5.34:0,5,27	0/0:14,0:14:18.18:0,18,366	0/0:52,0:11:27.81:0,28,222	0/0:55,0:16:44.27:0,44,354	0/1:25,0:25:14.97:18,0,15	1/1:31,0:30:2.42:25,2,0	0/1:50,1:47:20.44:95,0,20	0/1:67,0:50:99:99,0,266	1/1:43,1:44:5.56:70,6,0	0/0:42,0:38:46.81:0,47,1079	0/0:20,0:20:28.10:0,28,450	0/1:37,0:37:6.33:40,0,6	0/1:38,0:37:19.95:84,0,20	1/1:36,0:35:1.47:16,1,0	0/1:54,0:54:9.15:9,0,15	0/0:42,0:41:78.70:0,79,1185	1/1:28,2:30:3.29:134,3,0	1/1:17,0:16:26.67:196,27,0	0/1:16,0:14:4.27:121,0,4	1/1:22,0:21:11.27:78,11,0	0/1:73,0:65:9.08:26,0,9	1/1:46,1:47:21.76:168,22,0	1/1:18,0:18:12.10:78,12,0	0/1:39,0:41:1.31:56,0,1	0/1:21,1:22:0.19:0,0,0	0/1:52,2:53:56.19:524,0,56	0/1:22,0:21:20.33:34,0,20	0/1:6,0:6:9.79:45,0,10
chr10	110294123	.	T	TGC	2467.30	PASS	AB=0.791;AC=19;AF=0.339;AN=56;BaseQRankSum=7.446;DP=992;FS=1.023;HRun=0;HaplotypeScore=298.5464;InbreedingCoeff=-0.1536;MQ=34.66;MQ0=39;MQRankSum=-6.124;QD=3.78;ReadPosRankSum=0.823;VQSLOD=2.0873;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:42,4:45:8.98:9,0,40	0/0:15,0:15:42.13:0,42,642	0/0:50,0:10:29.46:0,29,430	0/0:56,0:16:45.15:0,45,715	0/0:11,13:24:4.94:0,5,22	0/1:17,10:26:12.74:29,0,13	0/1:39,13:48:63.26:261,0,63	0/1:54,8:45:99:245,0,848	0/1:26,16:42:22.07:137,0,22	0/0:42,0:38:99:0,111,1628	0/0:20,0:20:28.90:0,29,642	0/0:25,8:33:7.13:0,7,74	0/1:22,14:35:95.99:272,0,96	1/1:20,15:34:3.43:56,3,0	0/1:31,18:49:25.09:61,0,25	0/0:42,0:41:99:0,108,1650	0/1:27,3:30:0.76:1,0,107	0/0:17,0:16:24.14:0,24,157	0/1:11,4:13:99:135,0,169	0/0:13,9:21:18.34:0,18,131	1/1:67,5:65:10.33:169,10,0	0/1:37,10:47:31.63:32,0,137	0/0:14,3:17:8.35:0,8,34	0/1:37,4:41:5.51:29,0,6	0/1:11,9:20:0.04:0,0,0	0/1:37,16:52:99:886,0,363	0/1:12,8:19:56.13:224,0,56	0/1:4,2:6:60.02:80,0,60
chr10	110294124	.	ATG	A	98.74	PASS	AB=0.970;AC=13;AF=0.232;AN=56;BaseQRankSum=1.427;DP=999;FS=0.838;HRun=0;HaplotypeScore=306.7689;InbreedingCoeff=-0.0418;MQ=34.75;MQ0=39;MQRankSum=0.965;QD=0.26;ReadPosRankSum=1.792;VQSLOD=1.5869;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:6.09:0,6,72	0/1:12,2:15:54.52:55,0,232	0/0:51,0:10:2.50:0,2,9	0/1:54,0:15:0:0,0,0	0/0:25,0:25:3.01:0,3,33	0/1:27,0:26:0.21:0,0,1	0/0:54,0:50:1.82:0,2,109	0/0:63,0:46:34.19:0,34,232	0/1:42,0:42:6.28:6,0,16	0/1:38,1:36:24.56:25,0,497	0/1:18,1:19:9.91:10,0,238	0/0:33,0:33:6.79:0,7,50	0/0:36,0:35:14.44:0,14,110	0/0:36,0:35:0.78:0,1,3	0/0:49,0:49:0.33:0,0,2	0/1:39,2:41:52.28:52,0,642	0/1:31,0:31:25.13:25,0,29	1/1:17,0:16:0.58:11,1,0	0/1:15,0:13:2.41:2,0,24	0/0:22,0:21:8.31:0,8,56	0/0:73,0:66:5.94:0,6,22	0/0:48,0:48:6.60:0,7,96	0/0:18,0:18:3.74:0,4,9	0/0:42,0:42:7.37:0,7,60	0/1:20,0:20:0.19:0,0,0	0/1:54,0:53:31.59:32,0,159	0/0:20,0:19:13.12:0,13,88	0/0:5,0:6:8.88:0,9,73
chr10	110297620	.	ACTTT	A	4757.96	PASS	AB=0.964;AC=40;AF=0.769;AN=52;BaseQRankSum=8.534;DP=349;FS=0.000;HRun=0;HaplotypeScore=99.8134;InbreedingCoeff=0.4953;MQ=61.86;MQ0=1;MQRankSum=-7.467;QD=16.46;ReadPosRankSum=0.827;VQSLOD=4.3615;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,1:17:17.94:207,18,0	0/0:4,0:4:12.02:0,12,247	0/1:8,0:8:24.56:25,0,29	0/1:5,0:3:1.68:2,0,55	1/1:22,0:22:30.02:320,30,0	1/1:20,0:20:33.09:382,33,0	./.	1/1:23,0:23:41.94:423,42,0	1/1:9,0:9:12.04:139,12,0	0/0:15,0:15:24.05:0,24,496	0/0:23,0:23:53.36:0,53,1165	1/1:9,0:9:9.03:104,9,0	1/1:9,0:9:9.03:104,9,0	1/1:3,0:3:6.02:70,6,0	1/1:16,0:16:15.04:174,15,0	0/1:5,1:6:39.71:40,0,212	1/1:18,1:18:18.04:225,18,0	1/1:10,0:9:9.03:104,9,0	1/1:24,1:23:32.28:331,32,0	1/1:13,0:13:21.03:229,21,0	0/0:8,0:8:0.89:0,1,2	1/1:7,0:7:11.95:109,12,0	1/1:11,0:11:21.02:232,21,0	./.	1/1:13,0:13:24.07:278,24,0	0/1:20,0:20:22.87:493,0,23	1/1:14,0:14:42.12:487,42,0	1/1:10,0:10:24.07:278,24,0
chr10	110297629	.	CTTTCT	C	8669.66	PASS	AB=0.669;AC=38;AF=0.679;AN=56;BaseQRankSum=6.973;DP=319;FS=4.018;HRun=0;HaplotypeScore=80.1068;InbreedingCoeff=0.1816;MQ=48.69;MQ0=1;MQRankSum=-7.375;QD=31.07;ReadPosRankSum=1.871;VQSLOD=4.1587;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,12:19:27.85:388,28,0	0/0:4,0:4:12.02:0,12,299	0/0:4,0:2:5.38:0,5,39	0/1:6,0:3:1.80:2,0,84	1/1:1,21:22:45.05:692,45,0	0/1:3,20:22:20.57:739,0,21	1/1:3,2:5:3:29,3,0	1/1:2,15:18:44.96:704,45,0	0/1:2,7:9:24.37:238,0,24	0/0:8,0:8:24.05:0,24,597	0/0:24,0:24:59.38:0,59,1538	0/1:1,6:7:24.16:179,0,24	1/1:0,6:6:9.03:191,9,0	0/1:2,3:4:10.46:118,0,10	1/1:3,12:15:18.06:347,18,0	0/1:5,0:5:3.61:4,0,263	0/1:6,13:19:68.69:358,0,69	0/1:2,7:8:24.17:179,0,24	1/1:3,13:14:35.19:486,35,0	1/1:1,8:9:24.04:432,24,0	1/1:1,5:6:2.95:19,3,0	1/1:1,5:6:14.96:196,15,0	1/1:0,10:10:21.03:396,21,0	0/1:4,2:6:22.91:23,0,30	1/1:2,12:13:30.09:567,30,0	0/1:2,17:19:36.69:951,0,37	1/1:0,15:15:42.14:892,42,0	1/1:1,9:10:27.09:539,27,0
chr10	110297989	.	C	CA	4489.40	PASS	AB=0.889;AC=43;AF=0.768;AN=56;BaseQRankSum=8.590;DP=538;FS=3.950;HRun=10;HaplotypeScore=165.1352;InbreedingCoeff=0.8824;MQ=67.53;MQ0=0;MQRankSum=-8.545;QD=10.25;ReadPosRankSum=-4.278;VQSLOD=1.3771;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:36:24.25:107,24,0	0/0:8,0:8:17.97:0,18,148	0/0:14,0:14:17.83:0,18,154	0/0:15,0:16:22.24:0,22,163	1/1:6,24:29:52.37:540,52,0	1/1:0,27:27:75.18:793,75,0	1/1:3,19:22:42.11:448,42,0	1/1:14,0:27:30.26:151,30,0	1/1:10,0:22:28.51:145,29,0	0/0:19,0:19:41.93:0,42,345	0/0:25,0:26:44.93:0,45,369	1/1:17,0:17:29.23:152,29,0	1/1:17,0:17:28.18:172,28,0	1/1:19,0:19:31.54:172,32,0	1/1:19,0:22:40.69:214,41,0	0/0:16,0:17:43.97:0,44,348	1/1:22,0:22:21.38:115,21,0	1/1:15,0:15:20.08:95,20,0	1/1:20,0:19:29.48:151,29,0	1/1:13,0:12:8.72:50,9,0	1/1:14,0:14:16.32:91,16,0	1/1:9,0:11:14.71:72,15,0	0/1:14,0:16:6.60:45,0,7	1/1:13,0:17:12.69:63,13,0	1/1:5,16:20:48.12:509,48,0	1/1:11,0:23:34.18:186,34,0	1/1:12,0:20:31.41:161,31,0	1/1:2,1:6:11.40:57,11,0
chr10	110298366	.	T	TTCTCTC	2621.93	PASS	AB=1.000;AC=24;AF=0.444;AN=54;BaseQRankSum=-1.948;DP=737;FS=38.847;HRun=0;HaplotypeScore=193.4564;InbreedingCoeff=0.6648;MQ=65.04;MQ0=8;MQRankSum=-3.141;QD=7.51;ReadPosRankSum=-4.617;VQSLOD=0.0445;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,1:40:0.46:1,0,0	0/1:14,0:14:14.99:15,0,109	0/0:18,0:13:3.01:0,3,32	./.	0/0:22,0:22:15.05:0,15,242	0/0:27,0:26:16.32:0,16,170	0/0:32,0:31:5.94:0,6,288	1/1:40,0:39:17.45:217,17,0	1/1:14,12:27:0.26:1,0,0	0/0:23,0:24:30.05:0,30,488	0/0:12,0:12:8.97:0,9,180	0/0:27,0:27:30.08:0,30,462	0/0:23,0:23:30.53:0,31,461	0/0:20,0:20:21.07:0,21,379	0/0:36,0:36:54.17:0,54,903	0/1:28,0:28:40.29:40,0,544	1/1:21,0:21:7.90:410,8,0	1/1:17,0:16:9.03:210,9,0	1/1:19,0:18:11.93:180,12,0	1/1:19,0:26:1.55:4,2,0	1/1:30,1:31:21.54:482,22,0	0/0:20,0:26:6.02:0,6,102	0/0:23,0:23:35.99:0,36,610	0/0:33,0:34:24.10:0,24,425	0/0:22,0:22:17.33:0,17,242	1/1:31,0:40:35.43:647,35,0	1/1:23,0:23:9.03:239,9,0	1/1:21,0:21:23.45:362,23,0
chr10	110298405	.	T	TCTCTCA	5583.30	PASS	AB=0.925;AC=28;AF=0.500;AN=56;BaseQRankSum=-7.518;DP=723;FS=2.940;HRun=0;HaplotypeScore=193.3187;InbreedingCoeff=0.2443;MQ=52.09;MQ0=19;MQRankSum=0.417;QD=10.84;ReadPosRankSum=-2.311;VQSLOD=3.9789;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:31.67:241,32,0	0/1:18,0:17:9.51:10,0,244	0/0:7,0:3:2.08:0,2,42	0/0:12,0:5:5.47:0,5,39	0/0:31,0:31:68.47:0,68,573	0/0:23,0:22:23.87:0,24,285	0/0:30,0:29:8.38:0,8,298	1/1:40,0:38:76.93:654,77,0	1/1:36,0:36:12.68:284,13,0	0/0:28,0:28:65.30:0,65,672	0/0:23,0:23:47.24:0,47,456	0/1:35,0:33:99:327,0,170	0/1:27,0:27:99:133,0,308	0/1:29,0:29:99:176,0,255	0/1:37,0:36:99:236,0,504	0/0:33,0:32:7.87:0,8,775	1/1:15,0:15:36.87:520,37,0	0/1:8,0:13:7.45:277,0,7	1/1:13,0:10:11.62:139,12,0	1/1:24,0:24:32.70:256,33,0	1/1:29,0:29:22.18:540,22,0	0/1:29,0:28:39.39:192,0,39	0/1:26,0:25:99:123,0,339	0/1:42,0:42:99:279,0,218	0/0:20,0:20:30.53:0,31,324	1/1:25,0:24:16.50:653,16,0	0/1:4,13:22:5.94:205,0,6	1/1:17,0:16:25.22:339,25,0
chr10	110299832	.	A	AG	3057.18	PASS	AB=0.997;AC=24;AF=0.429;AN=56;BaseQRankSum=4.689;DP=552;FS=2.796;HRun=2;HaplotypeScore=69.3952;InbreedingCoeff=0.2512;MQ=58.94;MQ0=17;MQRankSum=0.264;QD=9.04;ReadPosRankSum=4.029;VQSLOD=1.5983;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:45.67:46,0,120	0/0:7,0:7:21.06:0,21,249	0/0:34,0:7:12.16:0,12,145	0/1:30,1:3:19.47:19,0,26	0/0:27,0:27:63.91:0,64,773	0/0:18,0:18:48.04:0,48,526	0/0:17,0:17:41.39:0,41,514	0/1:19,0:19:50.05:50,0,99	0/1:16,0:16:24.89:25,0,31	0/0:21,0:21:57.09:0,57,621	0/0:19,0:19:51.12:0,51,602	1/1:0,13:13:27.09:387,27,0	1/1:1,7:8:15.05:215,15,0	1/1:2,16:16:24.08:344,24,0	1/1:1,19:19:36.12:515,36,0	0/0:15,0:14:33.20:0,33,440	0/1:28,0:27:16.61:61,0,17	0/1:13,0:13:15.38:15,0,64	0/1:21,0:21:6.96:7,0,173	0/0:19,0:19:1.26:0,1,137	0/1:19,0:19:5.04:35,0,5	1/1:0,11:11:17.91:206,18,0	1/1:3,19:22:29.60:514,30,0	1/1:1,20:20:51.17:728,51,0	0/0:17,0:16:35.79:0,36,435	0/0:20,0:19:4.25:0,4,122	0/1:28,0:28:39.49:39,0,77	0/1:16,0:16:25.99:43,0,26
chr10	110299834	.	G	GA	5235.89	PASS	AB=0.854;AC=32;AF=0.571;AN=56;BaseQRankSum=-1.444;DP=567;FS=1.303;HRun=11;HaplotypeScore=60.1402;InbreedingCoeff=0.6232;MQ=60.18;MQ0=16;MQRankSum=-3.583;QD=13.46;ReadPosRankSum=1.823;VQSLOD=5.0409;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,26:36:62.96:623,63,0	0/0:7,0:7:17.93:0,18,139	0/0:32,0:7:5.52:0,6,83	0/1:31,0:4:2.69:3,0,18	0/0:26,2:28:38.24:0,38,475	0/0:17,0:19:39.89:0,40,288	0/0:17,1:18:14.37:0,14,292	1/1:6,12:18:36.07:363,36,0	1/1:4,14:18:27.05:274,27,0	0/0:21,0:24:52.13:0,52,366	0/0:19,0:19:47.50:0,47,370	1/1:14,0:14:26.42:160,26,0	0/1:8,0:8:3.67:72,0,4	1/1:18,0:16:23.41:138,23,0	1/1:21,0:20:35.21:214,35,0	0/0:14,1:14:8.39:0,8,248	1/1:4,23:27:56.95:562,57,0	0/1:3,9:12:2.20:162,0,2	1/1:9,15:24:24.66:403,25,0	0/1:7,15:22:17.20:175,0,17	1/1:3,14:18:39:382,39,0	0/1:11,0:11:6.25:58,0,6	0/1:22,0:23:2.60:171,0,3	1/1:22,0:21:32.44:295,32,0	0/0:15,0:15:38.50:0,39,296	1/1:10,9:20:3.79:342,4,0	1/1:6,23:30:36.66:534,37,0	1/1:2,11:13:30.06:304,30,0
chr10	110299962	.	G	GA	7301.82	PASS	AB=0.611;AC=26;AF=0.464;AN=56;BaseQRankSum=-13.696;DP=614;FS=0.000;HRun=10;HaplotypeScore=61.3082;InbreedingCoeff=0.7203;MQ=71.02;MQ0=1;MQRankSum=-1.959;QD=21.10;ReadPosRankSum=0.437;VQSLOD=5.6249;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:28:53.42:750,53,0	0/0:10,0:10:29.97:0,30,246	0/0:23,0:20:8.29:0,8,200	0/0:20,0:19:17.84:0,18,218	1/1:5,16:21:26.44:475,26,0	1/1:5,21:27:13.71:541,14,0	1/1:4,16:21:47.99:494,48,0	0/1:9,13:22:10.20:307,0,10	1/1:4,23:27:16.91:590,17,0	0/0:28,1:29:33.91:0,34,485	0/0:19,0:19:53.94:0,54,443	0/0:22,0:22:59.80:0,60,486	0/0:19,0:19:50.94:0,51,419	0/0:25,0:25:68.90:0,69,565	0/0:21,0:21:56.91:0,57,465	0/0:26,0:25:65.86:0,66,539	0/1:10,13:23:40.52:412,0,41	1/1:1,18:19:45.11:479,45,0	1/1:5,12:17:11.70:312,12,0	1/1:5,15:20:23.48:454,23,0	1/1:3,13:16:33.08:352,33,0	0/0:18,0:18:47.91:0,48,390	0/0:17,1:18:18.93:0,19,358	0/0:16,0:18:49.02:0,49,381	1/1:4,22:26:7.86:495,8,0	0/1:7,14:21:1.13:399,0,1	1/1:7,31:39:80.88:846,81,0	0/1:5,14:19:22.70:396,0,23
chr10	110300488	.	TCA	T	406.46	PASS	AB=0.821;AC=15;AF=0.326;AN=46;BaseQRankSum=1.061;DP=503;FS=0.000;HRun=0;HaplotypeScore=67.3052;InbreedingCoeff=0.5656;MQ=70.88;MQ0=12;MQRankSum=-0.221;QD=3.15;ReadPosRankSum=1.148;VQSLOD=1.2372;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:11.99:0,12,110	0/0:4,0:4:3.01:0,3,42	./.	./.	./.	./.	1/1:9,0:11:5.68:28,6,0	./.	0/0:12,0:22:5.91:0,6,68	0/0:21,0:20:15.05:0,15,219	0/0:8,0:8:3.01:0,3,42	1/1:12,1:14:8.85:75,9,0	1/1:12,2:14:3.01:32,3,0	1/1:9,0:9:3.01:30,3,0	0/1:18,3:22:31.05:66,0,31	0/0:16,0:16:18.03:0,18,225	0/0:29,0:27:20.70:0,21,159	0/0:11,0:20:8.60:0,9,58	0/0:16,0:15:14.94:0,15,148	0/0:5,0:5:6.01:0,6,59	0/0:10,0:21:9:0,9,79	1/1:6,0:6:3.01:32,3,0	0/0:9,0:13:3:0,3,26	1/1:31,8:39:26.90:268,27,0	1/1:10,0:11:5.68:28,6,0	0/0:19,0:19:11.84:0,12,84	0/0:16,0:16:23.92:0,24,207	0/0:12,0:12:12.47:0,12,118
chr10	110300747	.	C	CA	18760.65	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-12.601;DP=581;FS=6.882;HRun=1;HaplotypeScore=55.9430;InbreedingCoeff=0.9757;MQ=92.69;MQ0=0;MQRankSum=-5.390;QD=39.50;ReadPosRankSum=5.113;VQSLOD=5.1240;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,43:43:99:1664,111,0	0/0:7,0:7:21.07:0,21,273	0/0:28,0:28:81.34:0,81,1005	0/0:22,0:22:57.30:0,57,678	1/1:0,16:16:48.12:694,48,0	1/1:0,21:21:60.20:899,60,0	1/1:1,28:29:69.23:1034,69,0	1/1:1,26:27:78.26:1169,78,0	1/1:0,18:18:51.17:765,51,0	0/0:20,0:20:60.20:0,60,779	0/0:11,0:11:30.10:0,30,389	1/1:1,14:15:39.13:585,39,0	1/1:0,23:23:66.22:989,66,0	1/1:1,22:23:57.19:854,57,0	1/1:0,25:25:57.19:854,57,0	0/0:17,1:18:6.20:0,6,578	1/1:0,25:25:72.24:1079,72,0	1/1:0,21:21:57.19:854,57,0	1/1:1,15:16:45.11:613,45,0	1/1:1,12:13:36.12:540,36,0	1/1:0,37:37:96.33:1439,96,0	1/1:0,14:14:42.10:605,42,0	1/1:1,7:8:21.07:315,21,0	1/1:0,29:29:75.25:1124,75,0	1/1:0,13:13:30.10:450,30,0	1/1:3,28:31:45.26:1110,45,0	1/1:1,20:21:57.19:854,57,0	1/1:1,6:7:18.06:270,18,0
chr10	110301427	.	G	GA	529.60	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.842;DP=642;FS=1.619;HRun=9;HaplotypeScore=60.1240;InbreedingCoeff=0.9158;MQ=70.86;MQ0=0;MQRankSum=-0.540;QD=19.61;ReadPosRankSum=-0.089;VQSLOD=3.8042;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:77.89:0,78,668	0/0:6,0:6:11.99:0,12,104	0/0:18,0:17:11.54:0,12,242	0/0:8,0:8:13.82:0,14,128	1/1:5,22:27:37.07:624,37,0	0/0:23,0:23:59.96:0,60,521	0/0:15,0:15:38.99:0,39,339	0/0:31,0:31:80.97:0,81,700	0/0:24,0:24:62.97:0,63,547	0/0:31,0:31:80.97:0,81,701	0/0:32,0:32:80.96:0,81,703	0/0:17,0:18:46.97:0,47,385	0/0:20,0:20:50.98:0,51,443	0/0:16,0:16:47.97:0,48,413	0/0:21,1:22:23.78:0,24,432	0/0:19,0:19:53.97:0,54,465	0/0:23,1:24:26.80:0,27,462	0/0:18,0:18:53.95:0,54,462	0/0:21,0:23:61.05:0,61,507	0/0:38,0:38:99:0,102,878	0/0:21,0:21:59.99:0,60,521	0/0:19,0:19:23.51:0,24,363	0/0:21,0:21:47.96:0,48,412	0/0:33,0:33:64.11:0,64,683	0/0:18,0:18:53.99:0,54,469	0/0:26,1:27:41.80:0,42,592	0/0:31,0:30:80.97:0,81,703	0/0:23,0:23:50.98:0,51,443
chr10	110302532	.	GT	G	18183.02	PASS	AB=0.554;AC=42;AF=0.778;AN=54;BaseQRankSum=10.140;DP=741;FS=9.828;HRun=3;HaplotypeScore=108.0509;InbreedingCoeff=0.7566;MQ=53.70;MQ0=12;MQRankSum=-0.169;QD=29.14;ReadPosRankSum=-0.057;VQSLOD=3.2384;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,42:42:78.41:1406,78,0	0/0:16,0:16:45.14:0,45,624	0/0:12,0:1:2.84:0,3,14	./.	1/1:1,19:20:57.09:661,57,0	1/1:1,17:17:42.13:520,42,0	1/1:3,23:23:27.06:334,27,0	1/1:14,18:27:48.14:579,48,0	1/1:0,39:36:93.29:1150,93,0	0/0:23,0:23:66.22:0,66,939	0/0:17,0:17:51.16:0,51,708	1/1:2,31:33:84.26:1040,84,0	1/1:0,34:34:93.29:1152,93,0	1/1:2,40:41:99:1338,108,0	1/1:2,38:40:99:1225,99,0	0/0:27,0:27:81.25:0,81,1122	1/1:2,27:28:69.22:854,69,0	1/1:3,27:27:68.79:854,69,0	1/1:3,15:15:39.11:467,39,0	1/1:1,32:32:84.26:1028,84,0	1/1:0,35:33:69.22:854,69,0	1/1:0,17:17:48.15:590,48,0	1/1:0,19:19:54.17:662,54,0	1/1:4,28:32:70.10:1062,70,0	1/1:0,21:21:63.20:780,63,0	0/1:2,25:26:8.19:793,0,8	1/1:1,25:21:54.17:667,54,0	0/1:3,7:10:25.11:168,0,25
chr10	110302813	.	CT	C	2950.32	PASS	AB=0.828;AC=36;AF=0.643;AN=56;BaseQRankSum=-0.940;DP=512;FS=1.482;HRun=13;HaplotypeScore=67.7673;InbreedingCoeff=0.5986;MQ=65.66;MQ0=1;MQRankSum=-2.142;QD=8.04;ReadPosRankSum=5.205;VQSLOD=2.7377;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,13:26:3.98:156,4,0	0/0:8,0:11:26.88:0,27,248	0/1:16,1:13:36.03:36,0,41	0/1:10,1:8:11.46:11,0,26	0/0:23,0:31:61.68:0,62,381	0/0:10,0:14:16.27:0,16,74	0/0:6,0:16:29.42:0,29,172	1/1:21,13:35:20.18:150,20,0	1/1:3,7:10:17.86:131,18,0	0/0:16,0:19:6.12:0,6,176	0/0:18,0:18:14.66:0,15,208	1/1:8,9:17:14.80:109,15,0	1/1:7,17:24:21.24:264,21,0	1/1:4,6:11:10.91:71,11,0	1/1:5,13:19:28.83:202,29,0	0/0:12,0:14:28.99:0,29,282	1/1:6,20:28:1.52:324,2,0	1/1:2,19:19:50.71:372,51,0	1/1:4,10:16:31.82:225,32,0	1/1:11,4:15:9.85:119,10,0	1/1:6,10:16:26.83:197,27,0	0/1:10,4:15:32.66:33,0,62	1/1:5,10:16:19.53:137,20,0	1/1:5,12:19:13.66:245,14,0	0/0:15,0:20:37.34:0,37,206	0/1:13,5:19:9.20:76,0,9	1/1:4,13:19:7.63:201,8,0	1/1:3,6:11:13.96:93,14,0
chr10	110303759	.	GGGGGGGCC	G	2276.87	PASS	AB=0.984;AC=27;AF=0.500;AN=54;BaseQRankSum=0.052;DP=190;FS=30.484;HRun=0;HaplotypeScore=54.9368;InbreedingCoeff=0.1270;MQ=84.49;MQ0=0;MQRankSum=-4.997;QD=17.38;ReadPosRankSum=1.684;VQSLOD=0.8957;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:5:31.69:32,0,35	0/0:2,0:2:3.01:0,3,64	0/0:23,0:16:37.54:0,38,981	0/0:12,0:9:8.72:0,9,451	1/1:2,6:8:7.83:258,8,0	1/1:7,2:9:24.08:389,24,0	1/1:5,17:22:24.96:450,25,0	0/1:7,0:7:15.88:66,0,16	0/1:8,0:8:47.24:60,0,47	0/0:2,0:2:3.01:0,3,38	0/0:3,0:3:3.48:0,3,112	1/1:4,1:5:6.02:113,6,0	0/1:4,0:4:9.83:10,0,11	1/1:8,0:8:6.98:248,7,0	1/1:7,0:7:15.02:172,15,0	0/0:6,0:6:15.05:0,15,424	0/1:12,0:12:11.16:48,0,11	0/1:4,0:4:26.93:27,0,40	0/1:4,0:4:16.19:24,0,16	./.	0/0:7,0:7:9.07:0,9,53	1/1:3,0:3:3.01:35,3,0	0/1:4,0:4:13.50:13,0,24	0/1:5,1:6:42.14:101,0,42	1/1:5,3:8:23.18:379,23,0	0/0:2,0:2:2.97:0,3,20	1/1:7,0:7:3.18:21,3,0	0/0:1,0:1:3:0,3,25
chr10	110303760	.	GGGGGGCC	G	2640.05	PASS	AB=0.967;AC=32;AF=0.593;AN=54;BaseQRankSum=0.898;DP=190;FS=26.711;HRun=0;HaplotypeScore=51.1072;InbreedingCoeff=0.3314;MQ=88.32;MQ0=0;MQRankSum=-4.729;QD=19.27;ReadPosRankSum=1.623;VQSLOD=1.1778;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:4:8.98:53,0,9	0/0:2,0:2:3.01:0,3,53	0/0:24,0:17:40.27:0,40,862	0/0:13,0:10:3.69:0,4,380	1/1:8,0:8:3.32:179,3,0	1/1:9,0:9:24.08:340,24,0	1/1:21,1:22:24.96:352,25,0	1/1:8,0:8:8.05:120,8,0	0/1:8,0:8:3.57:123,0,4	0/0:2,0:2:3.01:0,3,35	0/0:3,0:3:3.48:0,3,98	1/1:1,4:5:6.02:120,6,0	1/1:3,0:3:5.92:58,6,0	1/1:6,2:8:19.98:327,20,0	1/1:1,6:7:15.02:298,15,0	0/0:5,0:5:15.05:0,15,381	1/1:13,0:13:14.54:156,15,0	0/1:3,1:4:11.70:64,0,12	0/1:4,0:4:2.07:63,0,2	./.	0/1:8,0:8:9.61:10,0,20	1/1:3,0:3:3.01:35,3,0	1/1:3,0:3:2.63:22,3,0	0/1:6,0:6:5.81:96,0,6	1/1:8,0:8:23.97:324,24,0	0/0:2,0:2:2.97:0,3,20	1/1:6,0:6:8.37:65,8,0	0/0:1,0:1:2.99:0,3,24
chr10	110303761	.	GGGGGCC	G	3140.48	PASS	AB=1.000;AC=39;AF=0.722;AN=54;BaseQRankSum=-0.571;DP=192;FS=20.290;HRun=0;HaplotypeScore=47.2707;InbreedingCoeff=0.5863;MQ=88.00;MQ0=0;MQRankSum=-5.092;QD=22.43;ReadPosRankSum=0.933;VQSLOD=1.4746;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:5.47:114,5,0	0/0:2,0:2:3.01:0,3,48	0/0:24,0:17:45.35:0,45,736	0/0:13,0:10:10.13:0,10,340	1/1:8,0:8:11.95:172,12,0	1/1:10,0:10:27.09:369,27,0	1/1:22,0:22:24.55:327,25,0	1/1:8,0:8:14.97:165,15,0	1/1:6,2:8:15.66:270,16,0	0/0:2,0:2:2.99:0,3,24	0/0:3,0:3:3.48:0,3,83	1/1:5,0:5:6.02:91,6,0	1/1:3,0:3:9:99,9,0	1/1:8,0:8:23.97:299,24,0	1/1:7,0:7:15.02:205,15,0	0/0:5,0:5:15.05:0,15,338	1/1:3,10:13:14.95:253,15,0	1/1:4,0:4:3.17:62,3,0	1/1:2,2:4:7.58:106,8,0	./.	0/1:8,0:8:7.49:67,0,7	1/1:3,0:3:3.01:35,3,0	1/1:2,0:2:2.94:23,3,0	1/1:6,0:6:17.96:200,18,0	1/1:8,0:8:23.97:300,24,0	1/1:3,0:3:2.95:41,3,0	1/1:6,0:6:8.70:106,9,0	0/0:2,0:1:2.99:0,3,23
chr10	110303762	.	GGGGCC	G	3081.70	PASS	AC=40;AF=0.741;AN=54;BaseQRankSum=-0.168;DP=192;FS=22.458;HRun=0;HaplotypeScore=45.8493;InbreedingCoeff=0.6388;MQ=90.82;MQ0=0;MQRankSum=-5.463;QD=22.17;ReadPosRankSum=1.872;VQSLOD=1.1046;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:11.77:120,12,0	0/0:2,0:2:3.01:0,3,37	0/0:23,0:18:43.47:0,43,656	0/0:14,0:11:9.11:0,9,351	1/1:7,0:7:12:154,12,0	1/1:10,0:10:27.09:358,27,0	1/1:22,0:22:24.55:303,25,0	1/1:3,5:8:14.92:185,15,0	1/1:9,0:9:22.70:266,23,0	0/0:2,0:2:0.89:0,1,2	0/0:3,0:3:3.48:0,3,69	1/1:5,0:5:6.02:79,6,0	1/1:3,0:3:9.03:119,9,0	1/1:8,0:8:24.08:311,24,0	1/1:7,0:7:15.02:182,15,0	0/0:5,0:5:15.05:0,15,295	1/1:13,0:13:15.04:192,15,0	1/1:3,0:3:8.86:94,9,0	1/1:4,0:4:9.03:113,9,0	./.	1/1:8,0:8:4.92:104,5,0	1/1:3,0:3:3.01:35,3,0	1/1:2,0:2:2.74:24,3,0	1/1:6,0:6:11.02:133,11,0	1/1:8,0:8:23.96:276,24,0	1/1:3,0:3:2.98:41,3,0	1/1:2,4:6:8.66:145,9,0	0/0:2,0:1:0:0,0,0
chr10	110303764	.	GGCCGC	G	2550.77	PASS	AC=40;AF=0.769;AN=52;BaseQRankSum=1.305;DP=187;FS=22.348;HRun=0;HaplotypeScore=48.7876;InbreedingCoeff=0.6723;MQ=94.05;MQ0=0;MQRankSum=-5.692;QD=19.04;ReadPosRankSum=1.045;VQSLOD=1.5017;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:4:11.64:118,12,0	0/0:2,0:2:3.01:0,3,57	0/0:27,0:21:38.15:0,38,823	0/0:12,0:10:16.26:0,16,391	1/1:7,0:7:11.97:111,12,0	1/1:10,0:10:26.81:237,27,0	1/1:22,0:22:24.54:306,25,0	1/1:7,1:8:14.81:125,15,0	1/1:8,0:8:23.97:256,24,0	0/0:2,0:2:2.68:0,3,11	0/0:3,0:3:3.01:0,3,69	1/1:5,0:5:6.01:62,6,0	1/1:3,0:3:9.03:116,9,0	1/1:10,0:10:29.77:274,30,0	1/1:7,0:7:15.02:149,15,0	0/0:5,0:5:15.05:0,15,344	1/1:12,0:12:15.01:152,15,0	1/1:3,0:3:9.02:101,9,0	1/1:4,0:4:8.98:101,9,0	./.	1/1:1,5:6:6.02:105,6,0	1/1:3,0:3:3:27,3,0	1/1:1,0:1:3:26,3,0	1/1:4,0:4:11.86:98,12,0	1/1:8,0:8:23.84:201,24,0	1/1:3,0:3:2.92:17,3,0	1/1:5,1:6:8.83:128,9,0	./.
chr10	110303765	.	GCCGC	G	2380.25	PASS	AC=40;AF=0.769;AN=52;BaseQRankSum=0.970;DP=183;FS=21.145;HRun=0;HaplotypeScore=45.4472;InbreedingCoeff=0.6719;MQ=94.05;MQ0=0;MQRankSum=-5.999;QD=18.17;ReadPosRankSum=1.305;VQSLOD=1.5760;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:11.97:132,12,0	0/0:2,0:2:3.01:0,3,57	0/0:26,0:21:52.78:0,53,866	0/0:12,0:10:16.04:0,16,356	1/1:7,0:7:11.94:94,12,0	1/1:8,0:10:26.77:226,27,0	1/1:18,4:22:23.93:283,24,0	1/1:7,0:7:14.81:110,15,0	1/1:8,0:8:23.98:257,24,0	0/0:2,0:2:2.68:0,3,11	0/0:3,0:3:3.01:0,3,58	1/1:5,0:5:5.98:50,6,0	1/1:3,0:3:9.03:116,9,0	1/1:9,0:11:32.67:281,33,0	1/1:6,1:7:14.97:127,15,0	0/0:5,0:5:15.05:0,15,318	1/1:10,0:12:14.98:138,15,0	1/1:3,0:3:9.01:117,9,0	1/1:3,0:3:8.97:95,9,0	./.	1/1:5,0:5:6.02:76,6,0	1/1:3,0:3:3:27,3,0	1/1:1,0:1:3:28,3,0	1/1:4,0:4:11.86:92,12,0	1/1:7,0:8:23.77:179,24,0	1/1:0,2:2:2.92:17,3,0	1/1:5,1:6:8.61:97,9,0	./.
chr10	110304009	.	CGT	C	1814.59	PASS	AB=0.844;AC=40;AF=0.769;AN=52;BaseQRankSum=5.742;DP=516;FS=0.000;HRun=0;HaplotypeScore=70.6885;InbreedingCoeff=0.5224;MQ=61.03;MQ0=15;MQRankSum=0.729;QD=5.00;ReadPosRankSum=2.637;VQSLOD=2.3808;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,11:30:12.03:130,12,0	0/0:7,0:7:9.03:0,9,132	./.	./.	1/1:14,0:16:2.84:14,3,0	1/1:12,0:21:11.03:48,11,0	1/1:18,0:22:4.05:10,4,0	0/0:23,0:21:2.98:0,3,22	1/1:10,7:18:8.86:79,9,0	0/0:22,0:22:12.03:0,12,153	0/0:13,0:13:5.93:0,6,61	1/1:7,3:9:6.02:65,6,0	1/1:2,4:6:9.02:97,9,0	1/1:15,0:15:11.92:96,12,0	0/1:6,5:10:3.90:159,0,4	0/0:16,0:16:21.06:0,21,290	1/1:14,8:23:23.80:241,24,0	1/1:13,8:22:1.24:215,1,0	1/1:12,2:12:3.01:32,3,0	1/1:11,4:15:6.01:65,6,0	1/1:20,7:27:6.01:65,6,0	1/1:10,1:11:3.01:32,3,0	1/1:8,3:11:6.01:65,6,0	1/1:12,12:23:27.07:292,27,0	1/1:6,0:11:11.27:54,11,0	0/1:25,0:24:0.02:0,0,121	1/1:13,4:18:14.70:125,15,0	1/1:10,1:10:8.98:85,9,0
chr10	110305037	.	A	AAAGGAAGG	4786.50	PASS	AB=1.000;AC=35;AF=0.648;AN=54;BaseQRankSum=-1.268;DP=587;FS=1.830;HRun=0;HaplotypeScore=183.0272;InbreedingCoeff=0.7471;MQ=66.03;MQ0=9;MQRankSum=0.840;QD=12.03;ReadPosRankSum=0.248;VQSLOD=4.0965;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:6.02:219,6,0	0/0:7,0:7:12.04:0,12,273	./.	0/1:28,0:19:0:0,0,0	0/0:26,0:26:39.60:0,40,698	0/0:16,0:16:33.11:0,33,577	0/0:24,0:24:15.83:0,16,231	1/1:26,0:26:14.45:94,14,0	1/1:14,0:13:15.05:560,15,0	0/0:25,0:24:33.10:0,33,674	0/0:27,0:27:51.05:0,51,1073	1/1:16,0:16:14.88:56,15,0	1/1:24,0:24:26.85:99,27,0	1/1:18,0:18:9.52:32,10,0	1/1:20,0:20:11.52:39,12,0	0/0:22,0:22:51.17:0,51,1110	1/1:27,0:27:12.04:434,12,0	1/1:19,0:19:6.02:222,6,0	1/1:17,0:16:15.05:525,15,0	1/1:20,0:20:30.10:1003,30,0	1/1:16,0:16:9:156,9,0	0/1:13,0:13:9.57:48,0,10	1/1:20,0:20:16.96:52,17,0	0/1:36,0:35:0.12:43,0,0	0/0:17,0:16:15.05:0,15,278	1/1:24,0:23:11.96:319,12,0	1/1:27,0:29:21.07:774,21,0	1/1:4,4:10:3.01:111,3,0
chr10	110305063	.	AG	A	285.71	PASS	AB=0.680;AC=4;AF=0.071;AN=56;BaseQRankSum=8.662;DP=577;FS=0.000;HRun=2;HaplotypeScore=118.2434;InbreedingCoeff=-0.0787;MQ=56.51;MQ0=15;MQRankSum=-8.177;QD=3.48;ReadPosRankSum=1.415;VQSLOD=0.3319;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:17.89:0,18,215	0/0:7,0:7:18.06:0,18,262	0/0:16,0:9:26.97:0,27,327	0/0:14,0:9:27.09:0,27,369	0/1:13,15:28:99:147,0,389	0/1:13,11:24:90.83:91,0,339	0/1:12,6:18:97.42:97,0,168	0/0:29,0:29:82.95:0,83,1077	0/0:15,0:14:27.08:0,27,351	0/0:27,0:26:75.25:0,75,1079	0/0:27,0:27:81.27:0,81,1195	0/0:17,0:17:27.09:0,27,370	0/0:22,0:22:33.08:0,33,439	0/0:22,0:22:21.07:0,21,294	0/0:27,0:27:30.05:0,30,368	0/0:25,0:25:75.24:0,75,1089	0/0:20,0:20:24.03:0,24,302	0/0:18,0:18:24.03:0,24,295	0/0:19,0:15:45.15:0,45,628	0/0:22,0:22:64.25:0,64,800	0/0:17,0:16:48.14:0,48,667	0/0:15,0:15:38.70:0,39,508	0/0:19,0:19:40.38:0,40,442	0/0:32,0:31:57.18:0,57,790	0/1:5,7:12:59.92:60,0,106	0/0:20,0:19:54.18:0,54,787	0/0:30,0:30:48.37:0,48,616	0/0:11,0:11:15.05:0,15,205
chr10	110305066	.	AAGGAAGGAAGG	A	3046.93	PASS	AB=0.692;AC=5;AF=0.089;AN=56;BaseQRankSum=7.587;DP=581;FS=2.500;HRun=0;HaplotypeScore=193.2093;InbreedingCoeff=0.3270;MQ=58.00;MQ0=14;MQRankSum=-8.423;QD=37.62;ReadPosRankSum=1.435;VQSLOD=3.4744;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:15.05:0,15,560	0/0:7,0:7:18.06:0,18,759	0/0:17,0:10:23.03:0,23,398	0/0:14,0:10:30.09:0,30,419	1/1:11,15:26:16.11:1254,16,0	0/1:14,11:25:35.84:958,0,36	0/1:12,6:18:18.35:510,0,18	0/0:28,0:28:73.53:0,74,1283	0/0:16,0:15:27.08:0,27,1147	0/0:27,0:26:75.16:0,75,2754	0/0:27,0:27:81.27:0,81,3478	0/0:18,0:18:24.08:0,24,1037	0/0:23,0:23:33.11:0,33,1583	0/0:22,0:22:21.05:0,21,817	0/0:26,0:26:21:0,21,841	0/0:25,0:25:75.24:0,75,3418	0/0:20,0:20:18.92:0,19,741	0/0:18,0:18:18.02:0,18,739	0/0:20,0:16:47.95:0,48,1468	0/0:24,0:24:72.25:0,72,2471	0/0:17,0:16:47.56:0,48,1246	0/0:14,0:14:36.12:0,36,1351	0/0:19,0:19:36.59:0,37,1181	0/0:31,0:30:51.10:0,51,2016	0/1:5,7:12:76.46:447,0,76	0/0:20,0:19:54.19:0,54,1891	0/0:30,0:30:50.19:0,50,1854	0/0:13,0:13:20.26:0,20,316
chr10	110305077	.	G	GGGAAGA	4880.31	PASS	AB=0.645;AC=22;AF=0.393;AN=56;BaseQRankSum=6.251;DP=619;FS=0.826;HRun=0;HaplotypeScore=151.8593;InbreedingCoeff=-0.1764;MQ=66.00;MQ0=8;MQRankSum=-3.854;QD=11.30;ReadPosRankSum=2.751;VQSLOD=3.8524;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:3,0:27:7.37:197,0,7	0/0:8,0:8:18.06:0,18,442	0/0:21,0:15:18.31:0,18,743	0/0:17,0:14:40.34:0,40,824	0/0:29,0:29:58.30:0,58,640	0/0:24,0:24:68.56:0,69,577	0/1:13,0:13:8.17:8,0,225	0/1:30,0:30:57.48:57,0,362	0/1:4,0:20:20.15:471,0,20	0/0:25,0:24:69.21:0,69,1513	0/0:28,0:28:83.91:0,84,1853	1/1:0,0:17:18.05:208,18,0	1/1:0,0:25:32.86:393,33,0	1/1:1,0:21:12.04:143,12,0	0/1:2,0:26:46.08:125,0,46	0/0:24,0:24:72.22:0,72,1690	0/1:2,0:26:29:267,0,29	0/1:3,1:20:27.66:270,0,28	0/1:1,0:23:99:286,0,241	0/1:4,1:27:99:718,0,147	0/1:18,0:17:77.84:78,0,159	0/1:1,0:17:99:117,0,158	0/1:1,0:21:24.74:210,0,25	0/1:3,0:27:52.22:290,0,52	0/0:11,0:10:23.93:0,24,215	0/1:7,0:23:99:326,0,197	0/1:5,0:35:10.97:664,0,11	0/1:11,0:12:53.61:54,0,75
chr10	110305447	.	C	CT	5483.82	PASS	AB=0.638;AC=35;AF=0.625;AN=56;BaseQRankSum=-5.954;DP=594;FS=7.782;HRun=13;HaplotypeScore=77.1708;InbreedingCoeff=0.3290;MQ=70.49;MQ0=1;MQRankSum=-0.337;QD=10.82;ReadPosRankSum=-0.525;VQSLOD=3.9656;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,24:36:57.16:578,57,0	0/0:6,0:6:11.85:0,12,82	0/0:20,0:13:17.64:0,18,87	0/0:18,0:17:7.03:0,7,44	1/1:7,0:16:5.44:105,5,0	0/1:6,2:14:0.37:80,0,0	1/1:5,8:30:34.83:337,35,0	1/1:12,18:30:42.43:368,42,0	1/1:8,10:18:9.45:230,9,0	0/0:9,1:11:22.33:0,22,136	0/0:13,0:16:23.83:0,24,140	0/1:9,15:24:21.40:229,0,21	0/1:7,9:17:17.98:165,0,18	0/1:4,12:17:14.79:187,0,15	1/1:9,19:28:21.47:338,21,0	0/0:12,1:15:21.80:0,22,135	0/1:7,18:30:62.54:202,0,63	1/1:5,21:26:51.06:474,51,0	0/1:15,15:31:27.98:316,0,28	0/1:9,14:23:5.22:226,0,5	0/1:5,16:22:0.49:169,0,0	1/1:5,17:24:27.02:345,27,0	1/1:9,11:23:9.72:231,10,0	1/1:4,25:30:44.84:396,45,0	1/1:3,0:11:14.20:72,14,0	1/1:13,10:25:8.40:231,8,0	0/1:10,6:18:58.59:59,0,69	1/1:4,8:14:14.02:148,14,0
chr10	110305867	.	C	CACACACA	12582.74	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=7.382;DP=319;FS=33.307;HRun=0;HaplotypeScore=121.9331;InbreedingCoeff=0.5912;MQ=70.52;MQ0=0;MQRankSum=-9.655;QD=56.68;ReadPosRankSum=10.662;VQSLOD=2.6753;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:27:56.87:2001,57,0	0/0:2,0:2:6.02:0,6,95	0/0:15,0:13:17.06:0,17,440	0/0:20,0:19:30.42:0,30,929	0/0:1,0:1:3.01:0,3,83	0/0:6,0:6:15:0,15,242	0/0:17,0:17:37.17:0,37,416	1/1:0,6:9:27.08:773,27,0	1/1:0,9:12:27.09:988,27,0	0/0:5,0:5:12.03:0,12,271	0/0:12,0:12:21.06:0,21,359	0/1:13,0:13:0.91:713,0,1	1/1:15,0:15:33.11:752,33,0	0/1:9,0:9:52.58:328,0,53	0/1:16,0:16:3.92:639,0,4	0/0:15,0:15:42.12:0,42,911	1/1:0,11:11:24.08:879,24,0	1/1:0,3:6:9.03:332,9,0	1/1:0,8:10:27.08:910,27,0	1/1:0,5:7:6:221,6,0	1/1:2,5:9:5.92:200,6,0	0/1:21,0:21:12.78:459,0,13	0/1:13,0:13:18.56:584,0,19	1/1:12,0:12:8.61:220,9,0	0/0:4,0:4:12.02:0,12,136	1/1:1,13:18:42.07:1488,42,0	1/1:0,6:8:15.05:550,15,0	1/1:0,6:6:15.05:548,15,0
chr10	110305869	.	C	CACACACACA	14583.41	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=2.911;DP=276;FS=35.443;HRun=0;HaplotypeScore=115.9607;InbreedingCoeff=0.8550;MQ=72.49;MQ0=0;MQRankSum=-9.353;QD=83.33;ReadPosRankSum=10.074;VQSLOD=2.8739;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:57.20:1821,57,0	0/0:3,0:3:6:0,6,103	0/0:15,0:13:5.04:0,5,401	0/0:19,0:18:36.71:0,37,927	0/0:2,0:2:3.01:0,3,76	0/0:6,0:6:11.97:0,12,241	0/0:17,0:17:26.82:0,27,399	1/1:6,0:6:18.06:572,18,0	1/1:9,0:9:27.09:873,27,0	0/0:8,0:8:9.03:0,9,192	0/0:11,0:11:20.06:0,20,255	1/1:0,10:10:30.10:1368,30,0	1/1:0,12:14:30.10:1370,30,0	1/1:0,4:6:15.05:685,15,0	1/1:0,12:14:27.07:1230,27,0	0/0:15,0:15:42.12:0,42,839	1/1:10,0:10:24.08:759,24,0	1/1:3,0:3:9.03:288,9,0	1/1:8,0:8:24.08:760,24,0	1/1:5,0:5:6.02:186,6,0	1/1:7,0:7:6.02:204,6,0	1/1:0,12:14:21.06:960,21,0	1/1:2,10:13:24.04:1096,24,0	1/1:0,7:9:6.03:236,6,0	0/0:5,0:5:12.04:0,12,206	1/1:13,0:13:39.13:1233,39,0	1/1:6,0:6:15.05:469,15,0	1/1:6,0:6:15.05:473,15,0
chr10	110307106	.	GTT	G	3666.67	PASS	AB=0.975;AC=23;AF=0.411;AN=56;BaseQRankSum=-9.713;DP=688;FS=2.675;HRun=13;HaplotypeScore=125.5881;InbreedingCoeff=0.8726;MQ=67.27;MQ0=14;MQRankSum=2.378;QD=13.53;ReadPosRankSum=2.962;VQSLOD=2.4667;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:74.85:0,75,537	0/0:9,0:11:20.03:0,20,218	0/0:42,0:13:10.61:0,11,96	0/1:38,1:16:15.28:15,0,19	1/1:13,21:36:46.46:506,46,0	1/1:5,11:15:20.98:203,21,0	1/1:4,14:19:38.50:343,39,0	0/0:31,0:31:52.51:0,53,323	0/0:15,0:15:28.17:0,28,199	0/0:28,0:30:66.36:0,66,757	0/0:21,0:21:31.90:0,32,634	1/1:3,8:11:23.96:223,24,0	1/1:2,6:9:5.92:108,6,0	1/1:4,20:23:31.67:375,32,0	1/1:4,14:18:8.09:313,8,0	0/0:18,0:18:45.14:0,45,625	0/0:31,0:32:70.34:0,70,553	0/0:32,0:32:77.94:0,78,557	0/0:19,0:19:35.72:0,36,239	0/0:32,0:31:62.40:0,62,443	0/0:14,0:13:19.51:0,20,145	1/1:9,5:14:14.87:174,15,0	1/1:6,14:19:4.39:220,4,0	1/1:6,30:38:71.09:663,71,0	1/1:2,24:25:54.07:524,54,0	0/0:33,0:33:69.70:0,70,506	0/0:27,0:26:61.55:0,62,429	0/0:19,0:18:43.68:0,44,323
chr10	110307111	.	T	TG	8407.21	PASS	AB=0.764;AC=22;AF=0.393;AN=56;BaseQRankSum=-8.256;DP=677;FS=3.277;HRun=0;HaplotypeScore=102.3934;InbreedingCoeff=0.8919;MQ=67.53;MQ0=15;MQRankSum=0.260;QD=25.63;ReadPosRankSum=2.668;VQSLOD=5.5730;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,34:41:58.89:946,59,0	0/0:10,0:10:27:0,27,288	0/0:44,0:15:15.21:0,15,163	0/1:40,0:17:0.39:0,0,125	0/0:33,0:33:85.81:0,86,635	0/0:13,0:12:26.82:0,27,201	0/0:20,0:20:50.09:0,50,343	1/1:3,29:32:87.08:1005,87,0	1/1:0,13:13:30.10:388,30,0	0/0:30,0:30:80.32:0,80,919	0/0:22,0:22:57.12:0,57,722	0/0:10,0:10:26.83:0,27,199	0/0:10,0:10:20.89:0,21,161	0/0:24,0:23:47.57:0,48,341	0/0:19,0:18:50.66:0,51,376	0/0:17,0:17:47.63:0,48,622	1/1:4,29:33:78.07:989,78,0	1/1:1,32:33:81.17:1023,81,0	1/1:1,15:16:42.14:540,42,0	1/1:1,31:31:75:890,75,0	1/1:2,12:13:24.06:310,24,0	0/0:15,0:15:32.84:0,33,254	0/0:17,0:16:32.38:0,32,232	0/0:37,0:37:75.75:0,76,549	0/0:27,0:26:56.50:0,56,404	0/1:3,26:29:8.03:871,0,8	1/1:1,26:26:66.21:850,66,0	1/1:1,17:17:48.07:596,48,0
chr10	110307118	.	TTC	T	588.50	PASS	AB=0.976;AC=15;AF=0.268;AN=56;BaseQRankSum=-4.387;DP=669;FS=3.537;HRun=0;HaplotypeScore=137.9858;InbreedingCoeff=-0.1364;MQ=70.08;MQ0=15;MQRankSum=-0.658;QD=1.92;ReadPosRankSum=1.446;VQSLOD=2.5426;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:61.70:0,62,889	0/0:9,0:9:20.72:0,21,215	0/0:43,0:15:14.17:0,14,172	0/1:34,0:17:43.91:59,0,44	0/1:30,1:31:76.46:119,0,76	0/1:13,0:12:6.29:39,0,6	0/1:22,0:22:43.60:44,0,83	0/0:31,0:31:36.50:0,37,635	0/0:15,0:15:41.55:0,42,439	0/0:26,1:27:43.50:0,43,698	0/0:23,0:23:6.45:0,6,682	0/1:11,0:11:10.43:28,0,10	0/1:9,0:9:24.47:26,0,24	0/1:27,0:26:43.30:87,0,43	0/1:20,0:19:34.61:35,0,65	0/0:19,0:19:57.06:0,57,763	0/0:33,0:33:68.77:0,69,914	0/0:34,0:34:78.67:0,79,901	0/1:18,0:18:9.56:10,0,310	0/0:30,0:29:33.07:0,33,748	0/0:15,0:14:11.24:0,11,235	0/1:9,6:15:45.46:45,0,72	0/1:18,0:17:24.26:34,0,24	1/1:36,0:36:13.91:135,14,0	0/1:27,0:26:7.32:84,0,7	0/1:26,0:26:3:3,0,578	0/0:27,0:26:71.09:0,71,744	0/0:18,0:17:3.50:0,4,410
chr10	110308978	.	CTTA	C	12791.18	PASS	AB=0.554;AC=35;AF=0.625;AN=56;BaseQRankSum=15.404;DP=565;FS=4.419;HRun=0;HaplotypeScore=121.5944;InbreedingCoeff=0.9230;MQ=79.95;MQ0=0;MQRankSum=-4.479;QD=32.80;ReadPosRankSum=4.463;VQSLOD=5.5146;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:21:36.12:552,36,0	0/0:10,0:10:30.10:0,30,635	0/0:19,0:19:44.96:0,45,861	0/0:12,0:12:24.08:0,24,501	0/0:28,0:28:81.25:0,81,1631	0/0:21,0:21:60.21:0,60,1262	0/0:14,0:14:36.11:0,36,713	1/1:10,29:39:87.19:1237,87,0	1/1:1,15:16:39.13:597,39,0	0/0:26,0:26:63.21:0,63,1307	0/0:17,0:17:48.13:0,48,892	1/1:1,18:19:48.16:736,48,0	1/1:3,18:21:45.14:690,45,0	1/1:0,10:10:27.09:414,27,0	1/1:5,25:30:45.15:690,45,0	0/0:11,0:11:30.10:0,30,640	1/1:3,13:16:33.11:506,33,0	1/1:4,15:19:39.13:598,39,0	1/1:2,12:14:36.06:473,36,0	1/1:1,25:26:60.20:920,60,0	1/1:4,18:22:45.15:690,45,0	1/1:2,20:22:48.16:736,48,0	1/1:3,16:19:39.13:598,39,0	1/1:1,15:16:39.13:598,39,0	0/0:17,0:17:36.12:0,36,690	0/1:6,25:31:99:919,0,111	1/1:3,29:32:84.29:1286,84,0	1/1:3,14:17:36.12:552,36,0
chr10	110309126	.	T	TAA	6389.72	PASS	AB=0.976;AC=24;AF=0.429;AN=56;BaseQRankSum=-2.417;DP=524;FS=0.000;HRun=11;HaplotypeScore=77.1752;InbreedingCoeff=0.8562;MQ=69.40;MQ0=0;MQRankSum=0.189;QD=25.06;ReadPosRankSum=-1.298;VQSLOD=4.4555;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:17:45.14:620,45,0	0/0:7,0:8:23.76:0,24,206	0/0:8,0:7:5.93:0,6,56	0/1:12,0:12:3.44:3,0,86	0/0:33,0:37:53.78:0,54,716	0/0:16,0:16:42.04:0,42,401	0/0:13,0:14:41.81:0,42,390	1/1:4,14:19:42.12:587,42,0	1/1:1,7:9:20.56:269,21,0	0/0:21,0:24:59.24:0,59,525	0/0:35,0:35:84.09:0,84,815	0/0:12,0:13:26.66:0,27,244	0/0:17,0:17:48.07:0,48,464	0/0:7,0:7:15.01:0,15,145	0/0:19,0:19:51.04:0,51,487	0/1:19,1:20:20.99:21,0,359	1/1:1,15:17:42.14:608,42,0	1/1:5,15:20:36.12:521,36,0	1/1:4,12:18:15.48:502,15,0	1/1:7,24:34:79.99:1016,80,0	1/1:4,12:19:37.46:459,37,0	0/0:20,0:21:56.82:0,57,536	0/0:24,0:25:41.93:0,42,457	0/0:8,0:10:26.51:0,27,227	0/0:15,0:15:27.01:0,27,262	1/1:7,17:24:22.01:624,22,0	1/1:7,22:30:51.92:723,52,0	1/1:3,10:15:30.10:435,30,0
chr10	110309812	.	CGCAGTGGGCCCACGT	C	20191.88	PASS	AB=0.749;AC=36;AF=0.643;AN=56;BaseQRankSum=16.253;DP=554;FS=21.726;HRun=0;HaplotypeScore=241.1094;InbreedingCoeff=0.8001;MQ=64.21;MQ0=0;MQRankSum=-13.792;QD=52.45;ReadPosRankSum=1.908;VQSLOD=2.9591;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:24.08:797,24,0	0/0:8,0:8:24.08:0,24,1678	0/0:8,0:8:18.06:0,18,274	0/0:8,0:8:9.03:0,9,130	0/0:23,0:23:66.67:0,67,3140	0/0:22,0:22:66.23:0,66,4350	0/0:45,0:45:99:0,123,7194	1/1:5,20:25:60.19:941,60,0	1/1:0,19:19:45.15:1859,45,0	0/0:23,0:23:54.19:0,54,3321	0/0:14,0:14:39.13:0,39,2705	1/1:0,24:24:51.17:1960,51,0	1/1:1,16:17:21.07:929,21,0	1/1:0,18:18:42.62:1513,43,0	1/1:1,28:29:42.14:1490,42,0	0/1:24,1:25:57.28:57,0,4675	1/1:1,19:20:24.08:1005,24,0	1/1:0,18:18:30.10:1056,30,0	1/1:2,14:16:42.03:1273,42,0	1/1:0,14:14:21.07:792,21,0	1/1:0,19:19:2.97:133,3,0	1/1:3,14:17:24.08:701,24,0	1/1:1,13:14:24.08:767,24,0	1/1:0,19:19:12.04:408,12,0	0/0:18,0:17:54.17:0,54,3514	0/1:4,26:30:99:2483,0,356	1/1:0,26:26:33.11:1366,33,0	1/1:0,8:8:15.05:663,15,0
chr10	110311646	.	TG	T	2839.04	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.203;DP=682;FS=5.830;HRun=1;HaplotypeScore=77.4350;InbreedingCoeff=0.9999;MQ=80.79;MQ0=0;MQRankSum=-1.552;QD=36.87;ReadPosRankSum=1.935;VQSLOD=4.2347;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1914	0/0:16,0:16:48.15:0,48,739	0/0:20,0:20:57.19:0,57,891	0/0:20,0:20:50:0,50,679	1/1:0,23:23:69.19:943,69,0	1/1:0,25:25:69.23:965,69,0	1/1:0,17:17:45.15:630,45,0	0/0:30,0:30:90.31:0,90,1439	0/0:19,0:19:57.19:0,57,911	0/0:30,0:30:90.30:0,90,1420	0/0:22,0:22:63.11:0,63,970	0/0:26,0:26:78.25:0,78,1224	0/0:26,0:26:78.27:0,78,1244	0/0:21,0:21:63.21:0,63,999	0/0:20,0:20:60.20:0,60,959	0/0:24,0:24:72.25:0,72,1146	0/0:19,0:19:57.19:0,57,907	0/0:22,0:22:66.23:0,66,1055	0/0:26,0:26:78.27:0,78,1247	0/0:27,0:27:81.28:0,81,1292	0/0:40,0:40:99:0,120,1895	0/0:14,0:14:42.14:0,42,668	0/0:25,0:25:69.24:0,69,1100	0/0:27,0:27:78.16:0,78,1247	1/1:0,12:12:33.11:462,33,0	0/0:35,0:35:99:0,105,1652	0/0:37,0:37:99:0,111,1701	0/0:19,0:19:57.14:0,57,859
chr10	110312099	.	A	AC	7191.50	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-4.443;DP=533;FS=9.649;HRun=7;HaplotypeScore=60.7652;InbreedingCoeff=0.8536;MQ=80.57;MQ0=1;MQRankSum=-2.039;QD=19.03;ReadPosRankSum=1.039;VQSLOD=3.7230;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:35:72.22:869,72,0	0/0:10,0:10:30.05:0,30,289	0/0:9,0:9:2.51:0,3,103	0/1:22,0:23:37.95:38,0,130	0/0:16,0:16:42.06:0,42,405	0/0:10,0:10:27.04:0,27,261	0/0:18,0:18:48.07:0,48,463	1/1:10,10:20:27.07:314,27,0	1/1:6,13:19:36.07:418,36,0	0/0:24,0:24:57.09:0,57,550	0/0:23,0:23:63.10:0,63,607	1/1:5,1:16:20.13:102,20,0	1/1:3,0:9:20.09:102,20,0	1/1:3,2:14:20.28:129,20,0	1/1:7,0:16:5.98:144,6,0	0/0:26,0:26:72.11:0,72,695	1/1:5,25:30:52.51:781,53,0	1/1:5,21:26:28.26:623,28,0	1/1:3,14:17:45.10:518,45,0	1/1:2,14:16:36.03:402,36,0	1/1:3,37:40:81.25:979,81,0	1/1:1,0:4:5.68:29,6,0	1/1:2,0:12:14.68:74,15,0	1/1:0,1:21:49.01:270,49,0	0/0:19,0:19:51.08:0,51,492	1/1:4,15:19:45.11:529,45,0	1/1:4,13:17:27.08:326,27,0	1/1:1,22:23:45.14:543,45,0
chr10	110313421	.	TTTTG	T	7220.42	PASS	AB=0.600;AC=29;AF=0.518;AN=56;BaseQRankSum=-3.359;DP=620;FS=4.476;HRun=0;HaplotypeScore=116.6477;InbreedingCoeff=0.8801;MQ=66.30;MQ0=4;MQRankSum=-0.406;QD=21.17;ReadPosRankSum=2.008;VQSLOD=4.4009;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,31:41:65.24:1036,65,0	0/0:20,0:20:42.14:0,42,922	0/0:18,0:13:6.02:0,6,114	0/0:16,0:10:6.02:0,6,123	1/1:11,13:24:39.10:587,39,0	1/1:4,17:22:45.15:688,45,0	1/1:7,14:21:24.08:377,24,0	1/1:28,4:32:9.03:131,9,0	1/1:7,14:20:30.10:471,30,0	0/0:30,0:30:66.19:0,66,1509	0/0:22,0:22:42.09:0,42,922	0/0:6,0:24:32.84:0,33,566	0/0:4,0:13:15.05:0,15,261	0/0:11,0:22:24.08:0,24,425	0/0:7,0:24:48.16:0,48,853	0/0:15,0:15:21.07:0,21,491	1/1:8,15:23:39.13:613,39,0	1/1:8,21:29:42.14:660,42,0	1/1:15,6:21:18.06:283,18,0	1/1:7,12:18:33.03:464,33,0	1/1:10,14:23:39.09:586,39,0	0/0:10,0:31:57.15:0,57,943	0/0:5,0:15:28.77:0,29,439	0/0:11,0:28:45.15:0,45,774	1/1:6,7:13:12.04:189,12,0	0/1:7,14:21:28.94:571,0,29	1/1:4,10:14:14.65:235,15,0	1/1:7,8:15:21.07:330,21,0
chr10	110313978	.	TAATA	T	1974.43	PASS	AC=24;AF=0.750;AN=32;BaseQRankSum=3.454;DP=265;FS=6.271;HRun=0;HaplotypeScore=39.6304;InbreedingCoeff=0.5490;MQ=49.96;MQ0=26;MQRankSum=-1.393;QD=13.52;ReadPosRankSum=0.644;VQSLOD=1.6841;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,6:11:9.03:141,9,0	0/0:3,0:3:3.01:0,3,71	./.	./.	./.	1/1:4,0:8:6.01:56,6,0	./.	./.	./.	0/0:7,0:7:9.03:0,9,213	0/0:6,0:6:6.02:0,6,137	./.	1/1:5,0:7:6.01:56,6,0	1/1:3,0:6:6.01:56,6,0	./.	0/0:7,0:7:6.02:0,6,126	1/1:9,18:27:42.14:657,42,0	1/1:7,13:20:36.12:538,36,0	1/1:17,6:22:18.06:282,18,0	./.	1/1:6,1:7:3.01:47,3,0	./.	./.	./.	1/1:5,0:7:3:28,3,0	1/1:6,3:8:6.02:94,6,0	1/1:11,2:13:6.02:94,6,0	1/1:5,3:7:3.01:47,3,0
chr10	110314528	.	TCA	T	3475.50	PASS	AB=0.780;AC=21;AF=0.375;AN=56;BaseQRankSum=3.905;DP=716;FS=25.812;HRun=0;HaplotypeScore=168.0148;InbreedingCoeff=0.7223;MQ=61.04;MQ0=11;MQRankSum=-1.275;QD=12.59;ReadPosRankSum=1.073;VQSLOD=1.3764;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,17:34:38.71:514,39,0	0/0:10,0:10:21.04:0,21,316	0/0:41,0:30:57.15:0,57,808	0/1:38,1:34:11.58:12,0,712	0/0:29,0:26:24.08:0,24,379	0/0:22,0:21:32.32:0,32,480	0/0:34,0:32:14.44:0,14,687	0/1:17,14:28:42.69:483,0,43	1/1:16,14:30:29.14:402,29,0	0/0:41,0:41:99:0,105,1654	0/0:26,0:26:45.07:0,45,682	0/0:25,0:22:32.86:0,33,531	0/0:23,1:22:10.97:0,11,606	0/0:28,0:27:37.48:0,37,582	0/0:32,1:27:24.06:0,24,355	0/0:31,0:31:72.21:0,72,1144	1/1:11,3:14:14.26:181,14,0	1/1:11,1:12:2.57:36,3,0	1/1:11,9:18:28.03:332,28,0	1/1:15,10:24:32.99:347,33,0	1/1:11,17:24:33.10:406,33,0	0/0:27,0:27:29.59:0,30,440	0/0:27,0:27:6.01:0,6,97	0/0:23,1:23:33.06:0,33,486	0/0:18,0:17:14.86:0,15,191	0/1:12,11:21:4.22:470,0,4	1/1:7,7:14:15.95:219,16,0	1/1:3,0:3:6.02:73,6,0
chr10	110314539	.	C	CACAT	4938.80	PASS	AB=0.979;AC=30;AF=0.536;AN=56;BaseQRankSum=9.840;DP=744;FS=46.084;HRun=0;HaplotypeScore=199.3185;InbreedingCoeff=0.1174;MQ=49.50;MQ0=20;MQRankSum=-6.193;QD=9.21;ReadPosRankSum=-2.170;VQSLOD=2.4414;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,5:33:51.17:651,51,0	0/0:10,0:10:24.03:0,24,379	0/0:41,0:24:63.03:0,63,881	0/1:40,0:26:5.45:5,0,731	0/0:26,0:24:6.84:0,7,390	0/1:21,0:21:60.77:61,0,357	0/1:35,0:33:99:173,0,553	0/1:41,0:37:49.71:410,0,50	1/1:19,4:23:44.84:563,45,0	0/0:50,0:49:99:0,132,2058	0/0:23,0:23:51.13:0,51,854	0/1:28,1:25:34.29:34,0,452	0/1:23,0:21:33.25:33,0,522	0/1:29,0:26:19.04:19,0,516	0/1:32,0:26:37.18:37,0,247	0/0:31,0:31:81.20:0,81,1338	1/1:13,2:14:26.91:330,27,0	0/1:9,2:11:2.64:208,0,3	1/1:24,2:24:22.81:500,23,0	1/1:23,3:25:35.56:313,36,0	1/1:35,1:30:35.84:407,36,0	0/1:22,0:22:91.26:91,0,366	0/0:25,0:25:6.01:0,6,97	0/1:28,0:27:80.36:80,0,459	0/1:20,0:18:95.77:96,0,130	1/1:22,2:23:2.08:561,2,0	1/1:10,3:13:23.44:268,23,0	1/1:3,0:3:9.01:96,9,0
chr10	110314551	.	T	TACACATACACAC	10463.57	PASS	AB=0.889;AC=40;AF=0.714;AN=56;BaseQRankSum=4.898;DP=756;FS=62.591;HRun=0;HaplotypeScore=246.6072;InbreedingCoeff=0.4599;MQ=44.02;MQ0=35;MQRankSum=-4.442;QD=17.18;ReadPosRankSum=-1.973;VQSLOD=1.6581;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:27:27.06:752,27,0	0/0:10,0:10:18.06:0,18,581	0/0:35,0:14:9.02:0,9,141	0/1:37,0:18:5.31:5,0,198	0/1:25,1:23:33.97:127,0,34	1/1:9,19:31:14.59:452,15,0	1/1:36,0:34:44.42:1038,44,0	1/1:46,0:39:21.25:829,21,0	1/1:19,0:23:33.04:885,33,0	0/0:50,0:48:99:0,108,2726	0/0:22,0:22:47.60:0,48,1212	1/1:30,1:27:17.99:447,18,0	1/1:21,1:18:27.04:745,27,0	1/1:28,0:25:29.90:755,30,0	1/1:13,25:36:6.02:355,6,0	0/0:29,0:29:66.13:0,66,1725	1/1:8,0:9:2.06:309,2,0	1/1:8,0:9:15.05:461,15,0	0/1:27,0:25:43.25:519,0,43	1/1:24,0:25:6.92:210,7,0	0/1:44,0:33:11.48:94,0,11	1/1:16,1:17:11.88:407,12,0	0/1:5,20:27:0:0,0,0	1/1:30,1:30:24.43:523,24,0	1/1:17,0:15:24.01:452,24,0	0/1:21,0:21:70.04:797,0,70	1/1:11,0:14:14.97:270,15,0	1/1:1,0:1:3.01:32,3,0
chr10	110314567	.	C	CAT	1072.78	PASS	AB=0.980;AC=18;AF=0.321;AN=56;BaseQRankSum=6.601;DP=733;FS=15.223;HRun=0;HaplotypeScore=186.4845;InbreedingCoeff=-0.3798;MQ=39.86;MQ0=40;MQRankSum=-7.614;QD=2.26;ReadPosRankSum=-2.675;VQSLOD=1.4067;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:21:27.89:119,0,28	0/0:9,0:9:21.05:0,21,299	0/0:36,0:4:12.02:0,12,156	0/0:40,0:9:24.06:0,24,323	0/0:23,0:19:26.95:0,27,351	0/1:29,0:26:27.58:78,0,28	0/1:36,1:32:84.03:84,0,495	0/1:51,0:40:88.41:88,0,800	0/1:20,0:20:63.66:143,0,64	0/0:54,0:52:99:0,141,1948	0/0:23,0:21:54.14:0,54,779	0/1:30,2:24:61.81:62,0,137	0/1:22,0:16:88.85:89,0,141	0/1:21,3:20:68.79:69,0,236	1/1:37,0:31:5.88:36,6,0	0/0:30,0:30:72.74:0,73,1093	0/0:11,0:10:2.47:0,2,195	0/1:10,0:9:20.39:20,0,112	0/1:28,1:23:82.79:83,0,369	0/1:25,0:23:56.68:57,0,156	0/1:43,0:31:29.24:29,0,140	0/1:23,0:18:24.92:25,0,223	0/0:21,0:20:5.99:0,6,69	0/1:31,1:28:41.38:41,0,312	0/1:20,0:18:53.70:54,0,276	0/1:16,1:16:99:151,0,247	0/0:10,0:10:0.35:0,0,140	0/0:1,0:1:0.89:0,1,2
chr10	110314593	.	AC	A	1323.13	PASS	AB=0.727;AC=19;AF=0.339;AN=56;BaseQRankSum=0.423;DP=712;FS=24.718;HRun=7;HaplotypeScore=175.1289;InbreedingCoeff=0.7489;MQ=41.88;MQ0=41;MQRankSum=-2.733;QD=8.54;ReadPosRankSum=1.073;VQSLOD=-0.0145;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,5:11:0.78:0,1,2	0/0:8,0:8:18.06:0,18,226	0/0:48,0:2:3.01:0,3,34	0/0:49,0:6:6.02:0,6,70	0/0:22,0:22:45.14:0,45,562	0/0:30,0:27:19.64:0,20,243	0/0:46,0:40:63.67:0,64,794	1/1:11,23:27:11.26:530,11,0	1/1:4,8:13:6:61,6,0	0/0:55,0:54:99:0,117,1414	0/0:26,0:26:66.18:0,66,793	0/0:29,0:22:28.44:0,28,291	0/0:20,0:16:33.10:0,33,410	0/0:29,0:23:36.90:0,37,389	0/0:32,0:23:11.49:0,11,106	0/0:31,0:31:79.47:0,79,960	1/1:2,11:12:18.04:184,18,0	0/1:5,3:8:8.16:59,0,8	1/1:8,8:12:18.03:184,18,0	1/1:6,11:18:8.88:92,9,0	1/1:13,19:26:13.44:150,13,0	0/0:31,0:26:48.53:0,49,591	0/0:19,0:18:27.09:0,27,339	0/0:37,1:33:15.21:0,15,448	0/0:21,0:20:36.57:0,37,450	1/1:4,5:10:3.54:161,4,0	1/1:1,5:6:5.97:61,6,0	1/1:1,1:2:2.78:30,3,0
chr10	110314629	.	AC	A	1556.23	PASS	AB=0.945;AC=32;AF=0.615;AN=52;BaseQRankSum=6.181;DP=677;FS=1.368;HRun=2;HaplotypeScore=154.9085;InbreedingCoeff=0.0863;MQ=41.19;MQ0=69;MQRankSum=1.682;QD=3.18;ReadPosRankSum=0.596;VQSLOD=0.1605;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,1:5:2.84:38,3,0	0/0:12,0:12:23.25:0,23,270	./.	./.	1/1:25,0:22:11.67:81,12,0	0/1:30,0:24:34.46:34,0,49	0/1:47,2:41:26.45:26,0,164	0/1:24,4:18:19.08:117,0,19	1/1:5,2:7:20.96:207,21,0	0/0:49,0:46:99:0,117,1533	0/0:20,0:20:50.23:0,50,581	0/1:29,0:20:3.01:3,0,39	0/1:22,0:18:2.23:2,0,33	0/1:36,1:30:13.27:53,0,13	0/1:38,0:26:0.07:0,0,59	0/0:37,1:36:50.15:0,50,1035	1/1:12,1:11:14.28:110,14,0	1/1:7,2:7:7.38:105,7,0	0/1:17,3:7:23.40:23,0,55	1/1:3,5:8:11.97:151,12,0	0/1:17,4:19:56.34:56,0,114	0/1:35,3:31:59.87:60,0,79	0/1:15,2:15:3.93:58,0,4	0/1:48,0:42:31.71:41,0,32	1/1:19,1:19:12.20:82,12,0	1/1:12,5:11:32.55:356,33,0	1/1:3,1:4:5.23:44,5,0	1/1:2,1:2:6.02:76,6,0
chr10	110314630	.	C	CA	1824.02	PASS	AB=0.966;AC=33;AF=0.635;AN=52;BaseQRankSum=6.235;DP=672;FS=0.865;HRun=1;HaplotypeScore=150.7054;InbreedingCoeff=0.0391;MQ=41.15;MQ0=73;MQRankSum=1.290;QD=3.76;ReadPosRankSum=1.185;VQSLOD=0.3013;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,1:5:2.84:41,3,0	0/0:12,0:12:23.81:0,24,274	./.	./.	1/1:23,0:22:11.82:115,12,0	0/1:28,0:24:1.56:66,0,2	0/1:48,0:40:49.67:50,0,155	0/1:26,1:18:19.05:122,0,19	1/1:3,3:7:20.97:216,21,0	0/0:44,0:45:99:0,102,1478	0/0:16,0:20:54.01:0,54,628	0/1:28,0:19:12.60:13,0,25	0/1:23,0:18:15.94:16,0,32	0/1:34,0:30:9.97:67,0,10	0/1:35,0:25:17.60:18,0,52	0/0:35,0:35:61.16:0,61,1004	1/1:7,6:11:14.35:122,14,0	1/1:7,2:7:7.49:111,7,0	0/1:20,0:7:23.40:23,0,55	1/1:7,1:8:11.95:143,12,0	0/1:14,6:18:62.34:62,0,123	0/1:38,0:31:57.25:71,0,57	1/1:17,0:15:1.79:63,2,0	0/1:47,0:43:12.39:65,0,12	1/1:18,1:18:20.31:109,20,0	1/1:13,3:11:32.56:374,33,0	1/1:3,1:4:5.23:47,5,0	1/1:2,1:2:6.02:79,6,0
chr10	110314691	.	T	TAC	5469.87	PASS	AB=0.823;AC=29;AF=0.630;AN=46;BaseQRankSum=-2.373;DP=488;FS=15.607;HRun=0;HaplotypeScore=121.2350;InbreedingCoeff=0.6906;MQ=53.72;MQ0=11;MQRankSum=-4.007;QD=19.19;ReadPosRankSum=1.131;VQSLOD=4.2272;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:2:3:26,3,0	0/0:17,0:16:26.92:0,27,314	0/0:40,0:5:8.94:0,9,90	0/0:39,0:6:5.96:0,6,74	1/1:7,11:19:24.08:394,24,0	1/1:8,13:19:33.11:530,33,0	1/1:17,17:30:16.59:750,17,0	0/1:6,0:3:2.54:20,0,3	./.	0/0:39,0:39:93.23:0,93,1130	0/0:24,0:24:50.94:0,51,566	1/1:7,14:18:27.09:442,27,0	1/1:5,14:17:30.10:483,30,0	1/1:10,9:16:14.97:245,15,0	1/1:14,12:23:23.98:393,24,0	0/0:24,0:24:18.28:0,18,460	./.	0/0:3,0:3:2.22:0,2,7	./.	./.	0/1:3,0:3:0:0,0,0	1/1:5,26:35:36.04:590,36,0	0/1:6,12:19:1.10:463,0,1	1/1:10,22:32:36.04:588,36,0	1/1:4,15:20:30.10:490,30,0	1/1:3,0:3:3:28,3,0	./.	1/1:0,0:1:3:26,3,0
chr10	110314710	.	C	CACA	104.13	PASS	AB=0.785;AC=6;AF=0.111;AN=54;BaseQRankSum=1.056;DP=535;FS=3.033;HRun=0;HaplotypeScore=160.4825;InbreedingCoeff=0.1264;MQ=48.70;MQ0=21;MQRankSum=-2.478;QD=3.86;ReadPosRankSum=-4.440;VQSLOD=0.5901;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:2.88:0,3,40	0/0:13,0:13:34:0,34,614	0/0:65,0:9:27.02:0,27,434	0/0:52,0:12:23.77:0,24,290	0/0:23,0:23:33.10:0,33,568	0/0:21,0:20:39.56:0,40,689	0/0:32,1:30:74.92:0,75,1311	0/1:11,0:9:85.80:86,0,139	0/0:2,0:2:3.01:0,3,55	0/0:40,0:39:99:0,117,2045	0/0:21,0:21:54.17:0,54,966	0/0:18,0:16:32.87:0,33,565	0/0:20,0:18:34:0,34,571	0/0:16,0:14:18.06:0,18,325	0/0:25,0:23:36.03:0,36,578	0/0:21,0:21:54.17:0,54,931	0/0:4,0:4:3.01:0,3,56	0/1:2,0:3:6.92:7,0,49	0/0:12,0:6:0:0,0,0	1/1:1,1:4:2.84:14,3,0	0/0:9,0:9:4.53:0,5,33	0/0:39,0:39:61.42:0,61,1093	0/0:21,0:21:48.13:0,48,842	0/0:27,2:28:48.16:0,48,857	0/0:18,0:18:39.60:0,40,709	0/1:3,1:4:20.70:21,0,34	./.	0/1:2,2:4:46.39:88,0,46
chr10	110314753	.	AC	A	1221.84	PASS	AB=0.724;AC=19;AF=0.365;AN=52;BaseQRankSum=-2.179;DP=488;FS=2.161;HRun=7;HaplotypeScore=115.8241;InbreedingCoeff=0.7079;MQ=42.03;MQ0=36;MQRankSum=-4.270;QD=8.20;ReadPosRankSum=-1.218;VQSLOD=1.0083;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,5:9:4.75:59,5,0	0/0:8,0:8:23.79:0,24,258	./.	0/1:31,0:8:3.02:3,0,60	0/0:28,0:23:27.08:0,27,331	0/0:22,0:20:27.02:0,27,320	0/0:22,0:19:20.95:0,21,224	1/1:3,16:18:36.53:413,37,0	1/1:2,2:4:6.01:60,6,0	0/0:23,0:20:51.15:0,51,624	0/0:18,0:18:33.11:0,33,415	0/0:19,0:11:11.57:0,12,115	0/0:16,0:10:15.05:0,15,189	0/0:14,0:11:16.21:0,16,156	0/0:25,0:19:14.08:0,14,120	0/0:22,0:22:47.88:0,48,588	1/1:3,6:10:11.02:128,11,0	0/1:3,5:8:13.10:120,0,13	./.	1/1:2,4:6:12.03:122,12,0	0/1:12,27:31:10.94:52,0,11	0/0:35,1:33:34.04:0,34,405	0/0:12,0:12:21.02:0,21,246	0/0:19,0:18:12.69:0,13,135	0/0:19,0:19:39.02:0,39,487	1/1:1,5:6:15.02:146,15,0	1/1:0,6:6:12.02:122,12,0	1/1:1,7:8:18.04:184,18,0
chr10	110314774	.	CAT	C	156.79	PASS	AB=0.993;AC=13;AF=0.241;AN=54;BaseQRankSum=3.044;DP=563;FS=2.186;HRun=0;HaplotypeScore=118.9923;InbreedingCoeff=0.0229;MQ=38.38;MQ0=49;MQRankSum=0.118;QD=0.70;ReadPosRankSum=-0.073;VQSLOD=1.8011;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:11:9.02:0,9,130	0/1:10,0:10:5.05:5,0,345	./.	0/0:26,0:4:5.65:0,6,71	0/1:30,1:26:43.99:50,0,44	1/1:23,0:20:24.93:149,25,0	0/1:17,0:14:14.39:20,0,14	0/0:33,0:22:39.15:0,39,746	0/0:12,0:12:9.03:0,9,136	0/1:37,0:32:15.37:15,0,864	0/0:28,0:27:12.11:0,12,606	0/0:17,1:10:3.24:0,3,33	0/1:13,0:9:29.39:29,0,75	1/1:14,0:9:3.11:8,3,0	0/0:22,1:15:0.21:0,0,20	0/0:21,0:20:12.57:0,13,530	0/1:18,0:16:0.62:1,0,219	0/1:11,0:11:4.65:5,0,262	0/0:14,0:6:11.07:0,11,158	0/0:9,0:8:15.05:0,15,265	0/0:48,0:38:8.83:0,9,143	0/1:31,1:29:7.29:7,0,163	0/0:8,0:7:8.88:0,9,70	0/1:18,0:15:6.94:7,0,14	0/0:24,0:24:41.78:0,42,611	0/0:12,0:10:28.16:0,28,422	0/0:6,0:6:14.98:0,15,222	0/0:9,0:8:23.32:0,23,312
chr10	110314776	.	TAC	T	819.62	PASS	AB=0.942;AC=17;AF=0.315;AN=54;BaseQRankSum=-0.457;DP=578;FS=5.899;HRun=0;HaplotypeScore=115.6461;InbreedingCoeff=0.6167;MQ=38.00;MQ0=50;MQRankSum=2.961;QD=4.12;ReadPosRankSum=1.521;VQSLOD=2.4687;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:13:9.02:0,9,103	0/0:10,0:10:9.72:0,10,267	./.	0/0:25,0:4:6.02:0,6,68	1/1:30,1:26:27.06:291,27,0	1/1:22,1:20:27.89:288,28,0	1/1:16,1:14:5.78:64,6,0	0/0:35,0:24:46.78:0,47,562	0/0:12,0:12:9.03:0,9,117	0/0:38,0:33:23.45:0,23,733	0/0:30,0:29:47.32:0,47,589	1/1:18,0:10:2.97:20,3,0	0/1:10,2:8:20.88:94,0,21	1/1:16,1:11:5.93:40,6,0	1/1:25,0:17:5.27:39,5,0	0/0:20,0:19:28.88:0,29,399	0/0:18,0:16:21.55:0,22,210	0/0:10,0:10:23.41:0,23,226	0/0:19,0:8:15:0,15,166	0/0:10,0:9:14.64:0,15,192	0/0:46,3:37:8.99:0,9,94	0/1:29,1:27:39.55:117,0,40	0/1:9,0:8:0:0,0,0	1/1:15,2:14:3.15:37,3,0	0/0:24,0:24:30.62:0,31,406	0/0:14,0:12:28.80:0,29,307	0/0:6,0:6:14.95:0,15,167	0/0:10,0:9:20.90:0,21,224
chr10	110314792	.	CACCA	C	1470.89	PASS	AB=0.942;AC=17;AF=0.304;AN=56;BaseQRankSum=-2.174;DP=617;FS=8.647;HRun=0;HaplotypeScore=128.6467;InbreedingCoeff=0.5211;MQ=35.08;MQ0=51;MQRankSum=3.732;QD=7.00;ReadPosRankSum=-2.459;VQSLOD=1.7864;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:16:8.80:0,9,102	0/1:10,0:10:9.80:10,0,332	0/0:25,0:4:9.03:0,9,122	0/0:34,0:5:15:0,15,167	1/1:19,9:23:27.09:452,27,0	1/1:22,2:21:39.07:492,39,0	1/1:24,1:19:30.03:342,30,0	0/0:42,0:28:51.01:0,51,616	0/0:15,0:15:9.03:0,9,117	0/0:41,0:37:88.19:0,88,1273	0/0:28,0:28:23.36:0,23,903	0/1:12,0:9:13.89:14,0,15	0/1:11,0:8:17.97:105,0,18	1/1:15,0:12:5.93:40,6,0	1/1:18,0:15:5.16:38,5,0	0/0:22,0:20:20.35:0,20,858	0/0:19,0:17:25.01:0,25,224	0/0:11,0:11:25.67:0,26,234	0/0:23,0:10:14.24:0,14,143	0/0:14,0:13:14.25:0,14,191	0/0:52,0:39:8.77:0,9,93	0/1:23,0:21:34.90:117,0,35	0/1:12,0:10:0.07:0,0,0	1/1:16,0:11:2.62:37,3,0	0/0:25,1:26:12.61:0,13,375	0/0:16,0:12:27.72:0,28,330	0/0:6,0:6:13.84:0,14,154	0/0:10,0:9:20.84:0,21,205
chr10	110314794	.	CCACACACA	C	566.81	PASS	AB=0.920;AC=15;AF=0.278;AN=54;BaseQRankSum=0.835;DP=607;FS=1.048;HRun=0;HaplotypeScore=145.0774;InbreedingCoeff=0.3002;MQ=34.70;MQ0=53;MQRankSum=-3.848;QD=2.60;ReadPosRankSum=-1.287;VQSLOD=1.9087;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,1:17:2.97:20,3,0	0/0:11,0:11:21.02:0,21,441	0/0:24,0:4:9.03:0,9,271	0/0:34,0:5:9.03:0,9,183	0/0:25,0:22:21.07:0,21,369	0/0:19,0:21:29.91:0,30,512	0/0:25,0:20:22.93:0,23,373	0/1:40,0:26:30.78:31,0,145	./.	0/0:38,0:38:90.26:0,90,2252	0/0:26,0:27:42.12:0,42,1298	0/0:18,0:9:3.01:0,3,44	1/1:11,0:8:2.98:22,3,0	0/0:17,0:11:2.90:0,3,16	0/0:19,0:13:2.04:0,2,7	0/0:21,0:20:45.13:0,45,1277	0/1:17,2:18:99:116,0,108	0/0:8,0:9:8.96:0,9,68	1/1:22,0:9:0.63:73,1,0	0/0:13,1:13:2.99:0,3,26	1/1:44,0:37:2.97:20,3,0	0/1:21,0:19:0:0,0,1	0/0:10,0:10:2.84:0,3,14	0/0:17,0:12:0.36:0,0,1	0/0:23,0:25:21.53:0,22,348	0/1:12,1:10:99:123,0,108	1/1:6,0:6:9.03:159,9,0	0/1:7,2:8:5.93:145,0,6
chr10	110314819	.	CACACAT	C	161.77	PASS	AB=0.987;AC=16;AF=0.296;AN=54;BaseQRankSum=4.283;DP=586;FS=2.281;HRun=0;HaplotypeScore=142.2101;InbreedingCoeff=0.1664;MQ=34.62;MQ0=47;MQRankSum=-4.114;QD=0.97;ReadPosRankSum=1.114;VQSLOD=2.3728;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:15:5.82:0,6,44	0/0:9,0:9:17.84:0,18,301	0/0:43,0:4:5.20:0,5,258	0/0:49,0:3:9.03:0,9,246	0/0:28,0:25:23.72:0,24,255	0/0:22,0:19:23.90:0,24,357	0/0:30,0:24:47.63:0,48,576	0/0:21,0:12:20.60:0,21,197	./.	0/0:46,0:42:99:0,114,2122	0/0:25,0:25:47.71:0,48,1189	0/1:20,0:11:24.89:29,0,25	0/1:11,1:11:39.74:90,0,40	1/1:16,0:11:0.47:1,0,0	0/0:25,1:19:5.04:0,5,25	0/0:24,0:23:59.23:0,59,1318	0/1:17,0:14:1.06:1,0,121	0/0:6,0:5:11.59:0,12,67	0/1:10,0:6:6.21:6,0,80	0/1:7,0:7:0.13:0,0,0	0/0:35,0:22:5.54:0,6,25	0/0:19,1:18:2.73:0,3,23	1/1:11,2:11:1.26:3,1,0	1/1:16,0:13:2.85:21,3,0	0/1:31,0:30:12.32:12,0,424	0/1:16,0:10:19.77:20,0,174	0/1:5,0:5:3.02:58,0,3	1/1:2,0:2:5.99:53,6,0
chr10	110314859	.	T	TAC	3485.94	PASS	AB=0.856;AC=28;AF=0.519;AN=54;BaseQRankSum=2.259;DP=558;FS=10.748;HRun=0;HaplotypeScore=172.2015;InbreedingCoeff=0.4123;MQ=42.73;MQ0=13;MQRankSum=-5.265;QD=10.28;ReadPosRankSum=-2.709;VQSLOD=1.8425;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:14:30.68:420,31,0	0/0:7,0:7:15.05:0,15,183	0/0:54,0:7:8.05:0,8,105	0/1:57,0:11:18.67:19,0,142	1/1:6,10:15:3.01:30,3,0	1/1:14,10:23:1.60:391,2,0	0/1:22,11:25:99:276,0,143	1/1:14,11:21:40.84:589,41,0	1/1:12,5:15:8.94:137,9,0	0/0:41,0:38:75.08:0,75,880	0/0:18,0:18:33.10:0,33,401	0/1:18,0:16:0.61:1,0,49	0/0:10,0:10:4.06:0,4,17	0/0:13,0:10:5.30:0,5,27	0/0:17,0:17:8.69:0,9,78	0/0:23,0:23:51.62:0,52,610	1/1:6,4:9:12.88:148,13,0	1/1:1,4:5:12.02:163,12,0	./.	1/1:6,9:15:5.58:82,6,0	1/1:10,6:14:9.01:108,9,0	0/0:11,0:10:3:0,3,37	0/0:15,0:15:2.69:0,3,35	0/1:16,0:13:0.09:0,0,0	0/1:22,13:32:75.65:306,0,76	0/1:11,12:20:21.05:597,0,21	1/1:2,3:5:6.02:91,6,0	1/1:2,2:4:9.03:128,9,0
chr10	110314868	.	ACACACACCATTAC	A	1839.65	PASS	AB=0.968;AC=17;AF=0.304;AN=56;BaseQRankSum=2.030;DP=540;FS=0.601;HRun=0;HaplotypeScore=230.4439;InbreedingCoeff=0.1369;MQ=42.40;MQ0=18;MQRankSum=-6.391;QD=7.73;ReadPosRankSum=-4.997;VQSLOD=1.1755;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:14:83.16:83,0,183	0/0:8,0:8:18.06:0,18,760	0/0:54,0:6:7.65:0,8,178	0/0:56,0:13:32.96:0,33,534	0/1:14,0:13:38.09:38,0,64	0/1:24,0:22:97.51:98,0,271	0/1:27,0:23:8.35:8,0,450	0/1:24,0:21:29.22:29,0,242	0/0:13,0:11:11.51:0,12,161	0/0:42,0:39:99:0,102,3258	0/0:17,0:17:39.13:0,39,1614	1/1:11,9:18:25.92:804,26,0	1/1:10,2:12:12.04:367,12,0	1/1:9,1:8:9.03:311,9,0	0/1:10,7:17:99:107,0,127	0/0:24,0:24:57.46:0,57,2134	0/1:10,0:9:17.47:17,0,121	0/0:6,0:6:10.98:0,11,174	0/0:5,0:4:6.01:0,6,63	0/1:15,0:15:4.86:21,0,5	1/1:16,0:14:9.35:77,9,0	0/0:9,4:12:3.40:0,3,66	0/0:11,5:16:4.10:0,4,36	0/0:11,4:12:1.14:0,1,3	0/1:32,0:29:46.67:47,0,511	0/0:22,0:18:2.73:0,3,921	0/0:7,0:7:8.36:0,8,81	0/0:4,0:4:9.03:0,9,196
chr10	110314874	.	ACCATTAC	A	1292.20	PASS	AB=0.991;AC=18;AF=0.321;AN=56;BaseQRankSum=4.182;DP=507;FS=1.254;HRun=0;HaplotypeScore=201.5566;InbreedingCoeff=0.0019;MQ=43.07;MQ0=15;MQRankSum=-4.438;QD=5.07;ReadPosRankSum=-6.073;VQSLOD=0.6975;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:14:72.80:73,0,162	0/0:7,0:7:18.06:0,18,381	0/0:48,0:5:10.81:0,11,190	0/0:50,0:13:33.03:0,33,544	0/1:13,0:12:34.08:39,0,34	0/1:24,0:22:99:140,0,200	0/1:25,0:21:5.66:6,0,372	0/1:26,0:22:17.49:17,0,221	0/0:9,0:8:11.39:0,11,115	0/0:39,0:36:99:0,102,2010	0/0:17,0:17:45.15:0,45,1026	1/1:15,3:18:26.25:513,26,0	1/1:8,4:12:12.04:260,12,0	1/1:6,3:8:9.03:205,9,0	0/1:15,0:17:58.83:59,0,99	0/0:24,0:24:60.38:0,60,1269	0/1:9,0:9:18.88:19,0,68	0/0:7,0:7:3.18:0,3,91	0/0:6,0:4:5.75:0,6,68	0/1:14,0:14:20.89:21,0,26	0/1:14,0:12:4.08:64,0,4	0/0:12,1:12:3:0,3,57	0/0:12,2:15:4.47:0,4,37	0/0:10,1:8:0.78:0,1,2	0/1:29,0:27:32.26:32,0,352	0/1:22,0:18:4.19:4,0,451	0/1:6,0:6:1.02:1,0,61	0/0:4,0:4:9.02:0,9,106
chr10	110314875	.	C	CA	2785.89	PASS	AB=0.974;AC=27;AF=0.482;AN=56;BaseQRankSum=3.273;DP=466;FS=13.370;HRun=1;HaplotypeScore=158.5289;InbreedingCoeff=0.2305;MQ=44.10;MQ0=15;MQRankSum=-4.117;QD=10.84;ReadPosRankSum=-0.486;VQSLOD=0.4754;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:14:25.87:372,26,0	0/0:7,0:7:17.85:0,18,216	0/0:48,0:5:11.06:0,11,158	0/0:46,0:13:28.80:0,29,296	0/1:12,1:12:1.53:43,0,2	0/1:18,3:19:8.82:395,0,9	0/1:24,0:20:99:223,0,157	1/1:26,0:22:2.07:296,2,0	1/1:7,0:6:12.01:153,12,0	0/0:38,0:36:79.77:0,80,978	0/0:17,0:17:44.30:0,44,494	0/1:17,0:17:2.28:36,0,2	1/1:8,1:9:5.15:44,5,0	0/1:8,0:7:3.50:18,0,4	0/1:14,0:14:1.49:1,0,65	0/0:23,0:23:55.23:0,55,678	1/1:6,0:7:6.33:132,6,0	0/1:7,0:7:8.60:113,0,9	0/0:5,0:3:3.06:0,3,8	1/1:12,0:12:5.90:81,6,0	1/1:10,0:9:9.90:106,10,0	0/0:9,1:10:3.12:0,3,39	0/0:12,0:12:3.98:0,4,38	0/1:9,0:7:0:0,0,0	0/1:28,0:25:99:238,0,101	0/1:20,0:17:31.32:506,0,31	0/1:5,0:5:9.82:80,0,10	1/1:4,0:4:9.03:119,9,0
chr10	110314877	.	AT	A	6347.33	PASS	AB=0.842;AC=53;AF=0.946;AN=56;BaseQRankSum=-3.071;DP=445;FS=1.248;HRun=2;HaplotypeScore=140.9202;InbreedingCoeff=0.1197;MQ=44.50;MQ0=15;MQRankSum=0.593;QD=14.26;ReadPosRankSum=2.299;VQSLOD=4.6769;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:14:38.68:349,39,0	1/1:0,7:7:18.06:234,18,0	0/1:44,5:5:5.97:6,0,39	0/1:37,6:10:11.81:12,0,247	1/1:2,11:12:9.08:58,9,0	1/1:2,16:18:39.31:353,39,0	1/1:2,19:18:32.93:392,33,0	1/1:4,17:18:14.70:356,15,0	1/1:0,7:6:12.03:130,12,0	1/1:1,38:38:99:1318,105,0	1/1:1,16:17:42.14:545,42,0	1/1:14,1:16:11.71:43,12,0	1/1:8,1:9:8.88:29,9,0	1/1:5,2:6:6.81:23,7,0	1/1:10,2:14:8.40:80,8,0	1/1:0,22:22:59.93:751,60,0	1/1:1,6:7:15.03:154,15,0	1/1:2,5:7:17.09:162,17,0	1/1:1,4:3:6.02:74,6,0	1/1:1,11:12:5.92:59,6,0	1/1:0,7:6:6.02:71,6,0	1/1:8,1:9:1.33:37,1,0	1/1:9,2:12:1.24:31,1,0	0/1:7,2:7:0:0,0,0	1/1:1,23:22:33.30:376,33,0	1/1:2,18:17:50.96:542,51,0	1/1:0,5:5:8.89:82,9,0	1/1:0,3:3:8.86:84,9,0
chr10	110314881	.	C	CCA	2367.22	PASS	AB=0.810;AC=31;AF=0.574;AN=54;BaseQRankSum=4.215;DP=504;FS=2.917;HRun=0;HaplotypeScore=189.0168;InbreedingCoeff=0.1550;MQ=39.34;MQ0=18;MQRankSum=-6.510;QD=7.86;ReadPosRankSum=-2.924;VQSLOD=2.9463;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,8:15:18.35:164,0,18	0/0:6,0:7:20.90:0,21,232	./.	0/0:48,0:9:3.01:0,3,33	1/1:8,7:15:6.02:81,6,0	1/1:12,9:20:24.03:313,24,0	1/1:15,11:22:17.54:238,18,0	0/1:20,8:22:17.15:245,0,17	0/1:5,3:7:20.58:166,0,21	0/0:41,0:40:72.08:0,72,809	0/0:15,0:16:39.11:0,39,460	0/1:19,1:18:9.38:9,0,34	0/1:10,0:11:6.90:11,0,7	0/1:16,0:15:9.62:16,0,10	0/0:16,0:16:2.74:0,3,9	0/0:23,0:23:48.12:0,48,568	1/1:4,2:7:6.02:82,6,0	0/1:5,3:8:4.43:119,0,4	1/1:5,1:5:3.01:44,3,0	1/1:7,7:14:5.55:53,6,0	1/1:9,2:10:3.08:37,3,0	0/1:9,0:10:0.11:0,0,0	0/1:12,0:12:0:0,0,0	1/1:12,0:9:0.47:1,0,0	1/1:14,12:24:25.04:295,25,0	0/1:9,10:17:33.20:452,0,33	0/1:4,2:7:11.13:65,0,11	1/1:1,2:3:9.03:134,9,0
chr10	110314898	.	CCAT	C	389.37	PASS	AB=0.955;AC=15;AF=0.268;AN=56;BaseQRankSum=5.760;DP=559;FS=6.547;HRun=0;HaplotypeScore=166.8125;InbreedingCoeff=-0.1189;MQ=36.56;MQ0=43;MQRankSum=-4.266;QD=1.58;ReadPosRankSum=-3.041;VQSLOD=1.6354;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:12:97.87:98,0,131	0/0:7,0:7:21.06:0,21,470	0/0:67,0:5:12.01:0,12,194	0/0:65,0:8:8.99:0,9,133	0/0:17,0:15:20.90:0,21,363	0/1:19,0:20:46:46,0,359	0/1:24,1:21:16.49:16,0,437	0/1:33,0:20:44.24:44,0,451	0/0:9,0:8:14.32:0,14,175	0/0:41,0:39:96.27:0,96,2304	0/0:17,0:17:48.16:0,48,1096	0/1:18,3:19:38.73:69,0,39	0/1:11,1:12:3.31:28,0,3	0/1:11,5:16:16.08:52,0,16	0/1:20,1:19:2.53:3,0,48	0/0:28,0:28:81.25:0,81,1770	0/0:8,0:7:2.59:0,3,51	0/1:6,0:6:41.37:41,0,144	0/0:12,0:10:1.37:0,1,171	0/1:12,1:12:13.03:27,0,13	1/1:16,0:12:5.63:47,6,0	0/0:9,3:9:0.34:0,0,1	0/1:8,0:7:0.03:0,0,0	0/0:8,1:8:0.33:0,0,1	0/1:30,0:27:46.48:46,0,512	0/0:15,1:15:21.85:0,22,568	0/1:6,0:6:15.26:15,0,96	0/0:2,0:3:9.01:0,9,113
chr10	110314899	.	CAT	C	65.83	PASS	AB=0.937;AC=15;AF=0.268;AN=56;BaseQRankSum=6.230;DP=552;FS=1.590;HRun=0;HaplotypeScore=162.4312;InbreedingCoeff=0.0765;MQ=36.41;MQ0=43;MQRankSum=-4.898;QD=0.33;ReadPosRankSum=-3.771;VQSLOD=1.7437;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,1:11:21.14:21,0,93	0/0:7,0:7:21.07:0,21,378	0/0:66,0:5:12.04:0,12,197	0/0:65,0:8:9.02:0,9,137	0/0:17,0:15:21.07:0,21,382	0/1:19,0:19:17.89:18,0,429	0/0:25,0:21:12.72:0,13,494	0/1:30,3:20:27.85:28,0,490	0/0:9,0:8:17.54:0,18,180	0/0:40,1:39:99:0,106,1899	0/0:17,0:17:47.99:0,48,815	0/1:19,1:18:12.81:13,0,25	0/1:10,1:12:0.60:20,0,1	1/1:16,1:16:3.35:20,3,0	0/1:19,1:19:4.10:4,0,24	0/0:28,0:28:81.22:0,81,1426	0/1:7,1:7:14.99:15,0,48	0/0:6,0:6:14.40:0,14,179	0/1:13,0:11:35.94:36,0,153	0/0:13,0:12:0.47:0,0,11	1/1:15,0:11:3.11:9,3,0	0/0:10,0:9:0.34:0,0,1	0/1:8,0:7:0:1,0,0	0/1:10,0:8:0.13:1,0,0	0/0:29,0:26:30.26:0,30,584	0/0:16,0:15:41.78:0,42,629	0/1:4,1:5:21.42:21,0,74	0/0:3,0:3:8.70:0,9,117
chr10	110314905	.	CATACAT	C	425.58	PASS	AB=0.913;AC=13;AF=0.232;AN=56;BaseQRankSum=4.009;DP=565;FS=0.690;HRun=0;HaplotypeScore=178.4087;InbreedingCoeff=-0.0180;MQ=34.97;MQ0=53;MQRankSum=-6.451;QD=2.25;ReadPosRankSum=-2.407;VQSLOD=2.1959;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,1:14:37.07:37,0,121	0/0:11,0:11:30.03:0,30,763	0/0:61,0:4:12.04:0,12,285	0/0:57,0:8:12.02:0,12,262	0/0:18,0:16:23.95:0,24,637	0/0:17,0:16:25.89:0,26,841	0/0:28,0:24:23.24:0,23,1008	0/1:31,1:19:31.33:31,0,404	0/0:10,0:8:12.54:0,13,143	0/0:45,0:43:99:0,122,3290	0/0:14,0:14:39.13:0,39,1370	0/1:19,1:18:42.43:63,0,42	0/1:11,1:13:10.22:90,0,10	0/1:13,2:16:44.09:59,0,44	0/1:17,2:18:31.27:55,0,31	0/0:29,0:29:81.28:0,81,2566	0/1:8,0:8:34.35:34,0,64	0/0:9,0:8:12.38:0,12,213	0/1:16,1:11:99:129,0,176	0/0:12,1:12:2.74:0,3,15	1/1:17,0:11:3.47:29,3,0	0/0:11,0:10:0:0,0,1	0/1:8,0:7:0.01:1,0,0	0/1:10,0:8:0:0,0,0	0/0:26,0:24:32.86:0,33,999	0/0:18,0:16:21.90:0,22,704	0/1:5,0:6:38.46:38,0,106	0/0:4,0:4:9:0,9,140
chr10	110314911	.	T	TACAC	2856.82	PASS	AB=0.948;AC=32;AF=0.571;AN=56;BaseQRankSum=7.295;DP=616;FS=15.228;HRun=0;HaplotypeScore=174.3062;InbreedingCoeff=0.6493;MQ=34.40;MQ0=57;MQRankSum=-7.808;QD=9.43;ReadPosRankSum=-2.325;VQSLOD=1.8503;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,3:13:22.24:269,22,0	0/0:12,0:12:26.90:0,27,366	0/0:62,0:5:9:0,9,121	0/0:49,0:5:9.01:0,9,127	0/0:22,0:19:29.82:0,30,331	0/0:19,0:19:6.40:0,6,380	0/0:29,0:27:43.86:0,44,578	1/1:36,0:22:32.36:496,32,0	1/1:7,3:8:18.04:326,18,0	0/0:46,0:42:76.12:0,76,1420	0/0:16,0:16:35.99:0,36,560	0/1:24,0:23:1.34:180,0,1	1/1:19,0:19:12.98:108,13,0	1/1:16,0:16:10.32:58,10,0	1/1:25,0:21:13.35:87,13,0	0/0:31,0:31:77.58:0,78,1192	1/1:11,2:10:7.34:41,7,0	0/1:8,2:9:10.82:183,0,11	1/1:20,0:13:14.02:193,14,0	1/1:16,3:13:7.93:71,8,0	1/1:22,0:12:5.96:47,6,0	1/1:14,0:10:2.43:10,2,0	0/1:9,0:7:0:0,0,0	1/1:10,0:9:2.53:23,3,0	0/0:25,0:23:22.75:0,23,446	0/1:22,1:20:10.48:687,0,10	1/1:4,3:7:13.94:152,14,0	1/1:4,0:4:6.02:122,6,0
chr10	110314919	.	C	CA	3538.35	PASS	AB=0.932;AC=32;AF=0.571;AN=56;BaseQRankSum=5.539;DP=623;FS=27.426;HRun=1;HaplotypeScore=145.6247;InbreedingCoeff=0.4447;MQ=35.66;MQ0=64;MQRankSum=-5.410;QD=9.49;ReadPosRankSum=-1.850;VQSLOD=-0.4559;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,2:12:6.25:296,0,6	0/0:12,0:12:36.04:0,36,451	0/1:64,0:7:58.24:58,0,135	0/0:49,0:8:15.04:0,15,173	0/0:21,0:19:32.98:0,33,377	0/0:20,0:20:36.13:0,36,464	0/0:24,0:27:54:0,54,649	0/1:27,4:20:28.07:422,0,28	1/1:11,2:9:17.79:195,18,0	0/0:48,0:43:99:0,104,1380	0/0:14,1:15:42.14:0,42,576	1/1:11,13:21:20.79:263,21,0	1/1:9,11:19:12.67:274,13,0	1/1:12,6:16:15.32:212,15,0	1/1:15,7:18:2.65:227,3,0	0/0:28,0:29:81.23:0,81,1093	1/1:16,1:13:18.94:251,19,0	0/1:9,0:8:24.47:57,0,24	0/1:19,0:11:16.88:226,0,17	1/1:15,2:11:9.03:134,9,0	1/1:26,4:17:2.71:28,3,0	1/1:13,4:13:8.11:121,8,0	1/1:6,1:4:3:25,3,0	1/1:8,1:9:1.61:46,2,0	0/0:26,0:24:44.99:0,45,530	1/1:13,12:22:10.24:477,10,0	1/1:7,1:8:17.75:194,18,0	0/1:3,1:3:29.81:34,0,30
chr10	110316668	.	CTCAA	C	7571.05	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=0.810;DP=804;FS=7.818;HRun=0;HaplotypeScore=131.3450;InbreedingCoeff=0.9587;MQ=58.40;MQ0=6;MQRankSum=4.909;QD=23.59;ReadPosRankSum=5.094;VQSLOD=3.7616;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,30:41:72.24:1146,72,0	0/0:10,0:10:18:0,18,248	0/0:40,0:32:21.03:0,21,348	0/0:32,0:27:17.42:0,17,313	0/0:5,0:26:29.97:0,30,369	0/0:1,0:26:30.03:0,30,471	0/0:4,0:28:15.02:0,15,195	1/1:11,14:25:42.12:610,42,0	1/1:8,23:32:45.09:692,45,0	0/0:35,0:36:72.25:0,72,1590	0/0:26,0:26:39.13:0,39,837	0/0:2,0:27:21.05:0,21,329	0/0:1,0:25:18.06:0,18,307	0/0:1,0:26:6.01:0,6,77	0/0:3,0:43:14.70:0,15,183	0/0:27,0:27:45.15:0,45,995	1/1:7,18:25:48.16:771,48,0	1/1:4,12:16:27.09:433,27,0	1/1:10,11:19:30.08:455,30,0	1/1:10,17:27:29.90:391,30,0	1/1:14,35:49:74.16:1202,74,0	0/0:0,0:34:22.85:0,23,302	0/0:0,0:23:14.88:0,15,182	0/0:3,0:31:7.49:0,7,73	0/0:2,0:19:15.05:0,15,270	1/1:11,15:26:45.13:687,45,0	1/1:17,24:40:51.17:799,51,0	1/1:6,12:18:24.08:385,24,0
chr10	110318712	.	GT	G	1763.34	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-2.849;DP=711;FS=0.458;HRun=1;HaplotypeScore=172.7775;InbreedingCoeff=0.8738;MQ=73.91;MQ0=14;MQRankSum=-1.935;QD=18.96;ReadPosRankSum=-0.141;VQSLOD=3.5148;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:48.42:0,48,235	0/0:11,0:11:30.57:0,31,480	0/0:41,0:37:99:0,108,1592	0/0:30,0:28:77.78:0,78,1164	1/1:9,16:25:38.42:691,38,0	1/1:0,10:9:18.01:208,18,0	1/1:0,16:16:33.10:412,33,0	0/0:26,0:26:57.50:0,57,302	0/0:31,0:29:29.86:0,30,228	0/0:33,0:33:99:0,99,1523	0/0:23,0:23:69.21:0,69,1046	0/0:15,0:15:30.09:0,30,425	0/0:19,0:19:45.15:0,45,674	0/0:32,0:32:87.29:0,87,1324	0/0:20,0:20:48.16:0,48,727	0/0:27,0:27:78.72:0,79,1192	0/0:32,0:35:48.81:0,49,264	0/0:27,0:26:49.45:0,49,183	0/0:22,0:20:53.58:0,54,299	0/0:35,0:33:51.42:0,51,212	0/0:55,0:52:97.40:0,97,393	0/0:18,0:18:48.16:0,48,729	0/0:29,0:29:50.33:0,50,723	0/0:16,0:16:24.08:0,24,351	1/1:5,15:19:48.14:610,48,0	0/0:24,0:23:36.82:0,37,274	0/1:21,0:20:2.17:2,0,82	0/0:2,0:2:1.55:0,2,4
chr10	110318714	.	GT	G	12383.01	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=1.508;DP=700;FS=20.194;HRun=1;HaplotypeScore=134.5589;InbreedingCoeff=0.9742;MQ=73.06;MQ0=14;MQRankSum=-0.696;QD=31.43;ReadPosRankSum=2.497;VQSLOD=3.1332;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,46:46:99:1410,102,0	0/0:11,0:11:25.08:0,25,441	0/0:37,0:34:99:0,102,1249	0/0:30,0:29:79.38:0,79,940	1/1:27,0:26:56.81:735,57,0	1/1:10,0:9:18.01:209,18,0	1/1:16,0:16:33.10:410,33,0	1/1:0,27:27:66.07:787,66,0	1/1:0,27:25:63.21:873,63,0	0/0:31,0:31:93.22:0,93,1247	0/0:22,0:22:66.19:0,66,917	0/0:14,0:14:26.17:0,26,164	0/0:19,0:19:43.86:0,44,293	0/0:33,0:33:85.85:0,86,583	0/0:20,0:20:47.28:0,47,303	0/0:26,0:26:70.18:0,70,1046	1/1:3,31:34:93.14:1232,93,0	1/1:0,27:26:63.21:873,63,0	1/1:0,20:18:51.11:666,51,0	1/1:1,34:33:93.23:1256,93,0	1/1:1,53:51:99:1812,132,0	0/0:18,0:18:47.18:0,47,305	0/0:28,0:28:45.39:0,45,290	0/0:15,0:15:23.61:0,24,148	1/1:22,0:21:38.18:595,38,0	1/1:1,26:26:54.13:815,54,0	1/1:1,19:19:48.16:668,48,0	1/1:0,2:2:3.01:42,3,0
chr10	110318715	.	T	TGG	5357.08	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-6.007;DP=704;FS=4.522;HRun=6;HaplotypeScore=175.2585;InbreedingCoeff=0.8614;MQ=72.79;MQ0=14;MQRankSum=-0.604;QD=21.26;ReadPosRankSum=-0.480;VQSLOD=1.9149;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:75.15:0,75,329	0/0:13,0:13:33.07:0,33,385	0/0:38,0:34:63.54:0,64,784	0/0:28,0:26:37.38:0,37,492	1/1:27,0:26:54.12:267,54,0	1/1:10,0:9:13.08:63,13,0	1/1:17,0:17:26.56:126,27,0	0/1:27,0:27:16.65:17,0,95	0/0:27,0:25:56.25:0,56,227	0/0:31,0:31:78.18:0,78,896	0/0:21,0:21:60.15:0,60,694	1/1:2,14:16:11.96:339,12,0	1/1:2,18:20:30.33:643,30,0	1/1:5,28:33:72.25:1210,72,0	1/1:1,19:20:45.15:757,45,0	0/0:26,0:26:75.15:0,75,851	0/0:34,0:34:70.22:0,70,295	0/0:27,0:26:47.82:0,48,204	0/0:20,0:18:32.09:0,32,141	0/0:36,0:34:51.82:0,52,262	0/0:54,0:51:72.42:0,72,373	1/1:4,13:17:36.12:599,36,0	1/1:2,26:28:44.63:735,45,0	1/1:2,13:15:24.08:403,24,0	1/1:22,0:21:42.65:199,43,0	0/0:28,0:27:0.53:0,1,102	0/0:19,0:19:41.81:0,42,165	0/0:2,0:2:2.68:0,3,11
chr10	110319462	.	T	TAAA	5666.85	PASS	AB=0.963;AC=18;AF=0.321;AN=56;BaseQRankSum=-7.578;DP=651;FS=0.000;HRun=8;HaplotypeScore=152.2667;InbreedingCoeff=0.6536;MQ=75.15;MQ0=0;MQRankSum=-1.637;QD=21.96;ReadPosRankSum=0.019;VQSLOD=1.5732;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:12.40:0,12,395	0/0:11,0:11:33.09:0,33,418	0/0:21,0:17:29.08:0,29,334	0/0:19,0:17:13.39:0,13,189	0/1:36,0:36:99:169,0,134	0/0:14,0:14:24.69:0,25,107	0/0:18,0:18:21.75:0,22,152	0/1:42,0:43:36.91:37,0,382	0/0:25,0:26:38.81:0,39,328	0/0:26,0:26:63.18:0,63,824	0/0:18,0:18:45.13:0,45,587	1/1:3,16:22:45.15:890,45,0	1/1:3,15:19:33.11:661,33,0	1/1:1,18:21:39.13:767,39,0	1/1:4,16:22:51.17:998,51,0	0/0:17,0:17:45.14:0,45,590	0/0:32,0:37:17.63:0,18,390	0/0:23,0:23:55.21:0,55,345	0/0:22,0:22:31.43:0,31,252	0/0:23,0:23:21.03:0,21,246	0/1:16,0:17:11.36:11,0,131	1/1:6,16:24:36.12:694,36,0	1/1:3,21:24:48.43:962,48,0	1/1:4,13:17:24.01:443,24,0	0/0:22,0:21:18.35:0,18,131	0/0:25,0:26:26.76:0,27,241	0/0:22,0:22:6.76:0,7,207	0/1:12,0:13:35.53:36,0,131
chr10	110319469	.	AAC	A	2929.02	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=-6.576;DP=615;FS=4.327;HRun=0;HaplotypeScore=142.2650;InbreedingCoeff=0.1916;MQ=73.05;MQ0=0;MQRankSum=1.158;QD=8.39;ReadPosRankSum=-7.451;VQSLOD=1.2736;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:43:36.01:36,0,381	0/0:11,0:11:33.10:0,33,527	0/0:23,0:19:30.13:0,30,468	0/0:16,0:14:15.38:0,15,269	1/1:0,33:33:93.06:1203,93,0	1/1:0,13:13:27.09:391,27,0	1/1:2,15:17:45.07:588,45,0	0/1:44,0:43:95.83:96,0,343	0/1:28,0:28:25.33:25,0,239	0/0:22,0:22:66.22:0,66,1071	0/0:18,0:18:51.14:0,51,817	0/0:23,0:23:12.08:0,12,349	0/0:18,0:18:35.37:0,35,266	0/0:22,0:22:30.79:0,31,306	0/0:20,0:20:52.85:0,53,448	0/0:15,0:15:45.15:0,45,739	0/1:38,0:38:70.11:70,0,299	0/0:21,0:21:20.88:0,21,272	0/1:25,0:25:23.01:23,0,206	0/1:21,0:21:0.47:0,0,186	0/1:15,0:15:17.77:18,0,130	0/1:20,0:20:24.52:25,0,182	0/0:22,0:22:17.29:0,17,281	0/0:14,0:14:6.11:0,6,197	1/1:2,17:19:42.10:584,42,0	0/0:21,0:21:15.75:0,16,202	0/1:20,0:20:17.45:17,0,179	0/1:13,0:13:33.24:33,0,108
chr10	110319829	.	A	ATATTT	8852.63	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-3.424;DP=382;FS=11.349;HRun=0;HaplotypeScore=68.2718;InbreedingCoeff=0.9099;MQ=62.67;MQ0=2;MQRankSum=-7.224;QD=36.58;ReadPosRankSum=0.774;VQSLOD=3.7196;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,25:35:72.14:1806,72,0	0/0:9,0:9:27.08:0,27,465	0/0:14,0:5:7.70:0,8,42	0/0:20,0:11:13.87:0,14,139	0/0:10,0:10:24.06:0,24,415	0/0:12,0:12:36.11:0,36,672	0/0:17,0:17:39.09:0,39,667	1/1:11,26:37:82.83:1392,83,0	1/1:0,3:3:3.01:85,3,0	0/0:23,0:23:63.19:0,63,1081	0/0:14,0:14:42.11:0,42,723	1/1:11,0:11:21:212,21,0	1/1:7,0:7:15.03:151,15,0	1/1:12,0:11:24.05:243,24,0	1/1:11,0:10:17.70:163,18,0	0/0:5,0:5:15.04:0,15,273	1/1:7,12:19:17.66:439,18,0	1/1:6,8:14:13.32:385,13,0	1/1:9,8:15:30.01:726,30,0	1/1:4,6:10:21:498,21,0	1/1:0,4:4:6.02:171,6,0	1/1:5,0:5:9.02:106,9,0	1/1:9,0:9:21.05:218,21,0	1/1:6,0:6:9.02:100,9,0	0/0:15,0:15:36.10:0,36,621	1/1:5,15:20:30.23:1152,30,0	1/1:5,8:14:27.09:702,27,0	1/1:1,5:7:12.04:305,12,0
chr10	110319832	.	T	TTTTA	6696.43	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=5.438;DP=382;FS=11.042;HRun=0;HaplotypeScore=74.1192;InbreedingCoeff=0.8615;MQ=61.33;MQ0=4;MQRankSum=-5.388;QD=28.25;ReadPosRankSum=1.095;VQSLOD=3.9344;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:36,1:37:38.59:1198,39,0	0/0:11,0:11:27.08:0,27,443	0/0:12,0:3:5.70:0,6,31	0/0:21,0:11:11.69:0,12,162	0/0:10,0:10:24.06:0,24,386	0/0:13,0:13:39.12:0,39,644	0/0:16,0:16:39.09:0,39,636	1/1:34,0:34:78.54:1036,79,0	1/1:4,0:3:3.01:55,3,0	0/0:24,0:24:63.16:0,63,1006	0/0:17,0:17:42.09:0,42,671	1/1:11,0:11:20.90:253,21,0	1/1:6,0:6:15.05:181,15,0	1/1:13,0:11:24.07:290,24,0	1/1:11,0:10:17.96:198,18,0	0/0:5,0:5:15.04:0,15,255	1/1:17,0:17:10.54:265,11,0	1/1:14,1:14:5.13:276,5,0	1/1:17,1:16:5.75:522,6,0	1/1:10,0:10:21:331,21,0	1/1:4,0:4:6.02:110,6,0	1/1:3,1:4:9.03:140,9,0	1/1:9,0:9:21.07:256,21,0	1/1:4,0:4:5.84:71,6,0	0/0:16,0:16:36.10:0,36,576	1/1:16,2:18:27.23:787,27,0	1/1:14,0:14:29.77:489,30,0	1/1:7,1:8:12.02:237,12,0
chr10	110319833	.	T	TTTA	6234.88	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=1.674;DP=391;FS=14.345;HRun=0;HaplotypeScore=72.0191;InbreedingCoeff=0.6686;MQ=59.11;MQ0=5;MQRankSum=-5.618;QD=25.55;ReadPosRankSum=2.722;VQSLOD=3.8375;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:36:0.81:832,0,1	0/0:12,0:12:33.03:0,33,449	0/0:12,0:2:4.99:0,5,25	0/0:21,0:11:13.71:0,14,158	0/0:11,0:11:24.06:0,24,351	0/0:13,0:13:39.12:0,39,593	0/0:16,0:16:39.09:0,39,582	1/1:32,0:32:57.61:804,58,0	1/1:3,0:2:3.01:41,3,0	0/0:23,0:23:66.08:0,66,938	0/0:18,0:18:45:0,45,628	1/1:0,11:11:21.06:425,21,0	1/1:2,6:9:18.06:359,18,0	1/1:1,12:11:24.08:487,24,0	1/1:3,8:11:18.02:328,18,0	0/0:5,0:5:15.04:0,15,232	1/1:18,0:17:4.44:187,4,0	0/1:16,0:15:17.73:180,0,18	0/1:18,0:16:5.42:350,0,5	1/1:10,0:10:20.99:246,21,0	1/1:4,0:4:6.02:81,6,0	1/1:2,4:6:12.04:218,12,0	1/1:3,9:12:27.09:501,27,0	1/1:1,3:4:5.30:120,5,0	0/0:16,0:16:39.07:0,39,545	1/1:18,0:18:27.21:584,27,0	1/1:14,0:14:24.35:346,24,0	0/1:8,0:8:5.38:147,0,5
chr10	110320505	.	A	AAGGG	7497.82	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-1.888;DP=648;FS=9.293;HRun=0;HaplotypeScore=168.5901;InbreedingCoeff=0.3059;MQ=68.87;MQ0=4;MQRankSum=-0.590;QD=14.56;ReadPosRankSum=0.678;VQSLOD=4.0060;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:41.60:327,42,0	0/0:6,0:6:18.02:0,18,247	0/0:31,0:25:41.42:0,41,440	0/0:25,0:17:25.13:0,25,258	1/1:3,27:29:82.01:1323,82,0	1/1:0,24:24:6.02:161,6,0	1/1:0,22:24:18.06:480,18,0	1/1:28,0:27:69.11:595,69,0	1/1:30,0:29:66.17:501,66,0	0/0:28,0:28:78.14:0,78,1107	0/0:21,0:21:60.02:0,60,821	0/1:15,0:15:30.14:125,0,30	0/1:18,0:18:42.24:121,0,42	0/1:26,0:26:53.01:259,0,53	0/1:42,0:42:99:286,0,146	0/0:22,0:21:66.07:0,66,928	1/1:14,0:14:38.59:280,39,0	1/1:18,0:18:5.12:200,5,0	1/1:11,0:10:20.18:156,20,0	1/1:27,0:27:45.49:383,45,0	1/1:13,0:13:14.92:232,15,0	0/1:29,0:29:51.92:227,0,52	0/1:32,0:32:16.82:343,0,17	0/1:27,0:27:99:203,0,150	1/1:1,21:24:24.08:597,24,0	0/1:17,0:17:41.51:274,0,42	1/1:28,0:27:33.58:294,34,0	0/1:13,0:13:2.34:131,0,2
chr10	110320553	.	AAGAG	A	4860.32	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=10.782;DP=652;FS=7.756;HRun=0;HaplotypeScore=183.2886;InbreedingCoeff=0.4870;MQ=57.68;MQ0=4;MQRankSum=-7.122;QD=11.85;ReadPosRankSum=-0.381;VQSLOD=3.3314;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:6.53:123,0,7	0/0:10,0:10:30:0,30,509	0/0:19,0:12:35.96:0,36,516	0/0:20,0:13:35.48:0,35,709	0/0:24,0:24:48.90:0,49,1251	0/0:26,0:25:66.21:0,66,1065	0/0:24,0:24:52.47:0,52,772	1/1:34,0:31:38.39:224,38,0	0/1:28,0:27:95.72:178,0,96	0/0:41,0:41:99:0,123,2423	0/0:22,0:22:60.16:0,60,1124	1/1:0,19:19:12.51:210,13,0	1/1:1,22:23:21.07:371,21,0	1/1:1,24:25:27.09:474,27,0	1/1:2,36:38:51.13:909,51,0	0/0:27,0:27:79.77:0,80,1474	1/1:11,0:11:16.22:96,16,0	0/1:11,0:11:38.51:39,0,67	1/1:12,0:9:3.85:9,4,0	0/1:29,0:29:99:127,0,257	1/1:10,0:10:12.21:67,12,0	1/1:1,23:24:59.28:707,59,0	1/1:1,19:20:23.60:390,24,0	1/1:2,31:33:36.12:683,36,0	0/0:29,0:29:60.86:0,61,1280	0/1:22,0:22:12.41:12,0,282	0/1:28,0:27:50.01:132,0,50	0/1:19,0:19:57.42:109,0,57
chr10	110320854	.	TA	T	15881.44	PASS	AB=0.537;AC=35;AF=0.625;AN=56;BaseQRankSum=16.325;DP=797;FS=6.202;HRun=5;HaplotypeScore=99.2494;InbreedingCoeff=0.9454;MQ=66.72;MQ0=1;MQRankSum=-2.738;QD=30.19;ReadPosRankSum=0.132;VQSLOD=4.7117;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,42:46:99:1359,120,0	0/0:12,0:12:33.11:0,33,451	0/0:25,0:25:35.97:0,36,799	0/0:17,1:15:31.07:0,31,415	0/0:38,0:38:99:0,105,1436	0/0:33,0:33:90.30:0,90,1231	0/0:29,0:29:84.28:0,84,1142	1/1:4,23:27:69.16:762,69,0	1/1:1,35:36:99:1157,102,0	0/0:38,0:38:99:0,111,1481	0/0:17,0:17:51.17:0,51,696	1/1:2,36:38:99:1190,105,0	1/1:1,15:16:45.13:511,45,0	1/1:1,20:21:60.17:681,60,0	1/1:5,29:34:81.22:910,81,0	0/0:28,1:29:44.19:0,44,960	1/1:0,45:45:99:1463,129,0	1/1:1,25:26:69.20:783,69,0	1/1:2,10:10:27.08:306,27,0	1/1:0,31:31:87.25:987,87,0	1/1:1,25:26:66.19:749,66,0	1/1:0,22:22:66.19:749,66,0	1/1:2,29:31:72.20:817,72,0	1/1:1,22:23:60.17:681,60,0	0/0:32,0:32:96.31:0,96,1299	0/1:4,25:29:3.87:738,0,4	1/1:1,33:34:93.27:1055,93,0	1/1:1,28:29:87.25:985,87,0
chr10	110322134	.	GA	G	5973.54	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.927;DP=630;FS=0.000;HRun=1;HaplotypeScore=67.2595;InbreedingCoeff=0.9980;MQ=87.36;MQ0=0;MQRankSum=-1.034;QD=37.81;ReadPosRankSum=4.073;VQSLOD=5.2727;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,150,2264	0/0:11,0:11:33.11:0,33,526	0/0:19,0:19:33.47:0,33,657	0/0:33,0:33:92:0,92,1256	0/0:26,0:26:72.20:0,72,1076	0/0:16,0:16:48.15:0,48,743	0/0:26,0:26:78.24:0,78,1199	0/0:25,0:25:72.21:0,72,1045	0/0:15,0:15:45.13:0,45,672	0/0:24,0:24:66.16:0,66,983	0/0:12,0:12:33.10:0,33,500	1/1:0,19:19:51.17:712,51,0	1/1:0,23:23:63.21:880,63,0	1/1:0,20:20:57.19:796,57,0	1/1:1,26:27:78.26:1079,78,0	0/0:27,0:27:81.24:0,81,1245	0/0:24,0:24:72.23:0,72,1124	0/0:12,0:12:36.09:0,36,518	0/0:18,0:18:54.18:0,54,862	0/0:8,0:8:24.08:0,24,383	0/0:36,0:36:99:0,108,1678	1/1:0,23:23:57.19:790,57,0	1/1:0,14:14:36.12:500,36,0	1/1:0,32:32:87.29:1216,87,0	0/0:22,0:22:63.21:0,63,997	0/0:34,0:34:99:0,99,1581	0/0:27,0:27:78.25:0,78,1212	0/0:6,0:6:17.99:0,18,213
chr10	110322406	.	A	ATTT	2839.44	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-3.485;DP=577;FS=1.051;HRun=11;HaplotypeScore=101.6148;InbreedingCoeff=0.9675;MQ=69.33;MQ0=1;MQRankSum=-1.359;QD=31.55;ReadPosRankSum=-3.193;VQSLOD=2.4921;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:98.95:0,99,1129	0/0:10,0:10:24.03:0,24,280	0/0:18,0:17:15.59:0,16,229	0/0:9,0:7:7.38:0,7,86	1/1:9,14:26:48.06:748,48,0	1/1:1,15:19:36.12:645,36,0	1/1:4,20:25:51.12:890,51,0	0/0:30,0:31:56.93:0,57,629	0/0:23,0:23:63.12:0,63,724	0/0:21,0:23:49.56:0,50,568	0/0:12,0:12:33.08:0,33,385	0/0:19,0:20:54.04:0,54,593	0/0:23,0:23:63.14:0,63,736	0/0:18,0:19:41.94:0,42,472	0/0:29,0:29:60.02:0,60,667	0/0:14,0:14:42.10:0,42,477	0/0:25,0:25:62.94:0,63,691	0/0:18,0:20:51.02:0,51,564	0/0:17,0:18:45:0,45,508	0/0:14,0:16:20.23:0,20,288	0/0:15,0:16:32.92:0,33,368	0/0:19,0:19:44.98:0,45,508	0/0:15,0:15:29.98:0,30,339	0/0:22,0:22:50.98:0,51,567	1/1:3,13:20:45.97:716,46,0	0/0:22,0:23:41.85:0,42,520	0/0:29,0:30:66.89:0,67,766	0/0:6,0:6:15:0,15,175
chr10	110322420	.	C	CT	4866.21	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-11.105;DP=586;FS=9.264;HRun=5;HaplotypeScore=70.5522;InbreedingCoeff=0.9072;MQ=69.49;MQ0=1;MQRankSum=1.558;QD=31.81;ReadPosRankSum=3.108;VQSLOD=5.3020;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,105,1127	0/0:9,0:9:27.07:0,27,290	0/0:19,0:18:32.78:0,33,320	0/1:7,0:5:18.26:18,0,55	0/0:21,0:22:49.85:0,50,521	0/0:19,0:19:36:0,36,382	0/0:20,0:20:50.87:0,51,508	0/0:30,0:30:72.18:0,72,773	0/0:31,0:31:87.19:0,87,918	0/0:21,0:21:57.14:0,57,611	0/0:15,0:15:42.10:0,42,451	1/1:2,21:23:57.19:749,57,0	1/1:2,22:24:63.20:829,63,0	1/1:2,16:18:48.16:632,48,0	1/1:4,23:27:57.19:750,57,0	0/0:20,0:20:57.13:0,57,604	0/0:23,0:23:60.14:0,60,645	0/0:23,0:23:57.10:0,57,600	0/0:28,0:28:65.34:0,65,666	0/0:19,0:19:48.08:0,48,492	0/0:15,0:15:42.09:0,42,443	1/1:4,17:21:63.20:822,63,0	1/1:1,13:14:30.10:395,30,0	1/1:2,17:19:51.17:671,51,0	0/0:21,0:21:41.87:0,42,441	0/0:20,0:20:45.10:0,45,475	0/0:31,0:31:75.01:0,75,806	0/0:7,0:7:15.04:0,15,161
chr10	110323206	.	CT	C	1127.50	PASS	AB=0.917;AC=9;AF=0.161;AN=56;BaseQRankSum=5.379;DP=507;FS=3.139;HRun=12;HaplotypeScore=59.5287;InbreedingCoeff=0.8575;MQ=58.66;MQ0=7;MQRankSum=2.682;QD=12.96;ReadPosRankSum=5.116;VQSLOD=3.7823;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:76.20:0,76,737	0/0:9,0:9:22.29:0,22,216	0/0:22,0:9:20.34:0,20,178	0/0:21,0:11:15.40:0,15,87	1/1:2,14:16:38.84:302,39,0	1/1:2,19:20:23.36:364,23,0	1/1:3,10:13:13.47:152,13,0	0/0:36,0:33:68.23:0,68,687	0/0:9,0:9:15.01:0,15,145	0/0:28,0:28:52.78:0,53,502	0/0:13,1:14:9.83:0,10,281	0/0:15,0:16:29.87:0,30,276	0/1:10,1:10:3.95:4,0,135	0/0:13,0:13:33.07:0,33,335	0/0:20,0:20:36.78:0,37,441	0/0:13,0:13:30.05:0,30,299	0/0:24,0:25:71.97:0,72,707	0/0:27,0:26:61.44:0,61,601	0/0:13,0:11:27.05:0,27,271	0/0:12,1:13:21.04:0,21,211	0/0:8,0:8:18.04:0,18,183	0/0:9,0:9:17.40:0,17,160	0/0:14,0:14:33.03:0,33,322	0/0:13,0:13:27.01:0,27,263	1/1:2,24:26:59.55:464,60,0	0/0:24,0:23:54.11:0,54,547	0/0:22,2:24:30.80:0,31,469	0/0:10,1:12:9.70:0,10,265
chr10	110323788	.	GAGAA	G	6823.39	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.020;DP=701;FS=3.735;HRun=0;HaplotypeScore=114.3111;InbreedingCoeff=0.9998;MQ=80.38;MQ0=0;MQRankSum=-0.977;QD=44.02;ReadPosRankSum=4.709;VQSLOD=5.1248;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,101,3032	0/0:10,0:10:30.10:0,30,810	0/0:25,0:24:51.54:0,52,1535	0/0:19,0:19:54.04:0,54,1175	0/0:30,0:30:90.26:0,90,2235	0/0:22,0:22:66.21:0,66,1647	0/0:26,0:26:75.24:0,75,1820	0/0:28,0:28:75.25:0,75,1917	0/0:26,0:26:72.25:0,72,1931	0/0:23,0:23:69.23:0,69,1728	0/0:19,0:19:57.19:0,57,1371	1/1:1,18:19:42.14:796,42,0	1/1:1,24:25:51.17:967,51,0	1/1:3,17:20:42.14:796,42,0	1/1:0,27:27:78.27:1460,78,0	0/0:27,0:27:75.26:0,75,1972	0/0:25,0:25:69.18:0,69,1693	0/0:10,0:10:30.10:0,30,806	0/0:26,0:26:75.22:0,75,1782	0/0:32,0:32:93.31:0,93,2414	0/0:33,0:33:99:0,99,2606	1/1:1,18:19:51.17:927,51,0	1/1:3,21:24:54.19:1024,54,0	1/1:0,21:21:45.15:853,45,0	0/0:29,0:29:87.28:0,87,2119	0/0:41,0:41:99:0,120,3074	0/0:26,0:25:78.26:0,78,1986	0/0:26,0:26:75.26:0,75,2023
chr10	110325438	.	TCCTCTCAGAAAA	T	5714.17	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.196;DP=631;FS=4.234;HRun=0;HaplotypeScore=217.4362;InbreedingCoeff=0.9660;MQ=92.80;MQ0=0;MQRankSum=-11.633;QD=79.36;ReadPosRankSum=2.137;VQSLOD=4.4454;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,169,10078	0/0:15,0:15:45.15:0,45,2754	0/0:34,0:34:90.31:0,90,4837	0/0:25,0:25:69.38:0,69,3129	0/0:39,0:39:99:0,117,6774	0/0:30,0:30:90.31:0,90,5210	0/0:18,0:18:54.19:0,54,3175	0/0:30,0:30:87.29:0,87,4469	0/0:20,0:20:60.21:0,60,3615	0/0:30,0:30:90.31:0,90,5290	0/0:26,0:26:78.27:0,78,4786	1/1:2,3:5:9.03:347,9,0	1/1:0,7:7:18.06:675,18,0	1/1:3,8:11:24.08:924,24,0	1/1:4,10:14:33.11:1268,33,0	0/0:24,0:24:72.25:0,72,4255	0/0:23,0:23:69.24:0,69,4049	0/0:14,0:14:39.13:0,39,2046	0/0:18,0:18:54.19:0,54,3149	0/0:26,0:26:78.27:0,78,4646	0/0:41,0:41:99:0,123,7422	1/1:0,12:12:24.08:926,24,0	1/1:1,13:14:36.59:1343,37,0	1/1:3,6:9:5.62:230,6,0	0/0:24,0:24:72.25:0,72,4423	0/0:32,0:32:96.31:0,96,5417	0/0:18,0:18:51.18:0,51,3029	0/0:13,0:13:39.08:0,39,1755
chr10	110337014	.	CGTCTTCTGGCTTCTTCAGGTACCTATACATGTA	C	4463.41	PASS	AC=14;AF=0.292;AN=48;BaseQRankSum=6.575;DP=163;FS=18.793;HRun=0;HaplotypeScore=173.6734;InbreedingCoeff=0.7631;MQ=118.87;MQ0=0;MQRankSum=-6.041;QD=262.55;ReadPosRankSum=4.986;VQSLOD=3.6556;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:15.05:1279,15,0	0/0:5,0:5:15.05:0,15,2060	0/0:13,0:13:39.13:0,39,2562	0/0:25,0:25:75.26:0,75,5523	0/0:9,0:9:27.09:0,27,2942	0/0:8,0:8:24.08:0,24,3090	0/0:12,0:12:36.12:0,36,4439	./.	./.	0/0:3,0:3:9.03:0,9,1392	0/0:9,0:9:21.07:0,21,1565	0/0:6,0:6:15.05:0,15,1636	0/0:7,0:7:21.07:0,21,2986	0/0:5,0:5:15.05:0,15,2013	0/0:3,0:3:9.03:0,9,1329	0/0:4,0:4:6.02:0,6,633	1/1:0,3:3:9.03:796,9,0	1/1:0,1:1:3.01:265,3,0	./.	1/1:0,1:1:3.01:265,3,0	./.	0/0:3,0:3:6.02:0,6,865	0/0:6,0:6:15.05:0,15,1120	0/0:19,0:19:42.14:0,42,5988	0/0:9,0:9:24.08:0,24,3154	1/1:0,1:1:3.01:265,3,0	1/1:0,5:5:15.05:1327,15,0	1/1:0,1:1:3.01:265,3,0
chr10	110337076	.	CCACACACACACA	C	587.78	PASS	AC=6;AF=0.150;AN=40;BaseQRankSum=0.405;DP=272;FS=7.141;HRun=0;HaplotypeScore=121.4839;InbreedingCoeff=0.5870;MQ=64.74;MQ0=18;MQRankSum=-1.364;QD=15.47;ReadPosRankSum=1.595;VQSLOD=2.0063;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:16:9.02:0,9,427	./.	./.	./.	0/0:12,0:11:14.70:0,15,226	0/0:7,0:10:18.06:0,18,266	0/0:13,0:10:9.53:0,10,88	0/0:13,0:10:6.02:0,6,226	0/0:5,0:5:9.03:0,9,429	0/0:14,0:14:27.08:0,27,1091	0/0:4,0:4:6.02:0,6,280	./.	./.	1/1:6,3:9:9.03:303,9,0	1/1:4,2:6:12.03:335,12,0	0/0:4,0:5:12.04:0,12,586	0/0:16,0:16:21.54:0,22,797	0/0:5,0:5:12.04:0,12,419	0/0:4,0:3:3.01:0,3,154	0/0:3,0:3:3.01:0,3,156	0/0:4,0:5:6.02:0,6,256	./.	./.	1/1:22,1:23:5.99:66,6,0	./.	0/0:7,0:6:12.04:0,12,487	0/0:11,0:9:5.59:0,6,297	0/0:3,0:3:6.02:0,6,332
chr10	110337138	.	T	TAA	5907.59	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=0.830;DP=355;FS=7.760;HRun=9;HaplotypeScore=69.6011;InbreedingCoeff=0.7417;MQ=54.97;MQ0=5;MQRankSum=-3.545;QD=19.50;ReadPosRankSum=0.825;VQSLOD=3.1311;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,21:29:71.14:981,71,0	0/0:2,0:2:6.02:0,6,64	0/1:23,0:13:11.95:12,0,171	0/0:22,0:9:21.50:0,21,215	1/1:0,1:14:35.45:157,35,0	1/1:4,0:13:24.27:82,24,0	1/1:2,0:18:34.93:120,35,0	1/1:3,18:21:56.66:811,57,0	1/1:1,4:7:17.53:203,18,0	0/0:12,0:13:27.04:0,27,343	0/0:2,0:2:2.99:0,3,32	1/1:0,0:10:22.46:77,22,0	1/1:2,0:6:9.86:33,10,0	1/1:3,0:8:12.48:43,12,0	1/1:5,0:10:9.71:32,10,0	0/0:12,0:12:30.05:0,30,319	1/1:7,19:29:67.97:911,68,0	1/1:1,12:13:36.12:554,36,0	1/1:11,9:19:32.54:424,33,0	1/1:2,4:6:15.52:232,16,0	1/1:3,5:9:13.42:140,13,0	1/1:0,0:1:2.50:9,2,0	1/1:0,0:4:7.49:26,7,0	1/1:4,0:15:29.28:98,29,0	1/1:5,0:12:17.47:60,17,0	1/1:3,10:13:30.10:462,30,0	1/1:2,7:10:18.01:231,18,0	1/1:2,4:6:15.51:211,16,0
chr10	110337263	.	GGATCT	G	8298.44	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=13.610;DP=416;FS=3.558;HRun=0;HaplotypeScore=92.0586;InbreedingCoeff=0.9913;MQ=75.27;MQ0=0;MQRankSum=-11.666;QD=49.40;ReadPosRankSum=1.028;VQSLOD=4.5860;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:26:44.88:974,45,0	0/0:5,0:5:15.05:0,15,472	0/0:19,0:18:54.19:0,54,1523	0/0:28,0:28:69.15:0,69,1998	0/0:6,0:6:18.06:0,18,570	0/0:22,0:22:60.21:0,60,1900	0/0:17,0:17:51.16:0,51,1531	1/1:1,16:17:48.16:1019,48,0	1/1:1,10:11:27.09:586,27,0	0/0:10,0:10:27.09:0,27,835	0/0:20,0:20:51.18:0,51,1615	0/0:13,0:13:39.13:0,39,1231	0/0:11,0:11:30.10:0,30,948	0/0:15,0:15:45.15:0,45,1415	0/0:10,0:10:30.10:0,30,925	0/0:10,0:10:30.10:0,30,923	1/1:3,22:25:59.67:1301,60,0	1/1:3,10:13:27.09:586,27,0	1/1:1,15:16:45.15:956,45,0	1/1:1,11:12:30.10:650,30,0	1/1:2,14:16:19.83:453,20,0	0/0:6,0:6:18.06:0,18,569	0/0:10,0:9:24.08:0,24,759	0/0:34,0:34:99:0,102,3187	0/0:12,0:12:33.11:0,33,1037	1/1:0,12:12:33.08:672,33,0	1/1:2,13:14:36.12:781,36,0	1/1:0,5:5:15.05:320,15,0
chr10	110337611	.	G	GCT	6611	PASS	AB=0.663;AC=25;AF=0.463;AN=54;BaseQRankSum=-9.007;DP=612;FS=0.893;HRun=0;HaplotypeScore=74.2353;InbreedingCoeff=0.5872;MQ=58.15;MQ0=4;MQRankSum=2.393;QD=21.26;ReadPosRankSum=-1.885;VQSLOD=4.7530;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,8:34:24.08:385,24,0	./.	0/0:28,0:15:18.25:0,18,247	0/0:44,0:27:21.01:0,21,274	1/1:2,1:2:3.01:48,3,0	0/1:13,11:20:9.10:358,0,9	0/1:12,16:24:0.04:494,0,0	1/1:9,11:18:33.10:502,33,0	0/1:7,12:13:9.10:358,0,9	0/0:14,0:14:17.89:0,18,195	0/0:15,0:12:12.04:0,12,143	0/0:28,0:24:50.97:0,51,579	0/0:23,0:20:36.11:0,36,434	0/0:23,0:18:36.11:0,36,431	0/0:26,0:19:45.14:0,45,543	0/0:40,0:28:66.19:0,66,784	1/1:6,18:24:17.99:783,18,0	1/1:7,14:20:2.95:542,3,0	1/1:9,11:18:33.11:512,33,0	0/1:6,2:8:60.24:73,0,60	1/1:22,24:44:42.08:1164,42,0	0/0:4,0:5:3.01:0,3,36	0/0:7,0:5:12.04:0,12,145	0/0:39,0:38:79.19:0,79,1101	1/1:4,6:11:18.06:289,18,0	1/1:10,4:14:12.04:193,12,0	1/1:5,19:23:18.05:781,18,0	0/1:3,7:9:57.27:129,0,57
chr10	110337710	.	TG	T	6818.75	PASS	AC=50;AF=0.962;AN=52;BaseQRankSum=-1.715;DP=413;FS=5.483;HRun=5;HaplotypeScore=38.3930;InbreedingCoeff=0.4906;MQ=46.67;MQ0=9;MQRankSum=-1.732;QD=17.13;ReadPosRankSum=1.445;VQSLOD=3.6911;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,36:35:81.19:903,81,0	1/1:0,1:1:3.01:34,3,0	./.	0/0:5,0:1:3.01:0,3,35	1/1:1,14:8:6.02:68,6,0	1/1:0,18:11:30.08:338,30,0	1/1:0,20:9:21.06:238,21,0	./.	1/1:1,23:15:36.10:406,36,0	1/1:3,11:10:21.06:238,21,0	1/1:1,10:5:11.99:122,12,0	1/1:2,17:10:18.05:204,18,0	1/1:1,11:7:15.04:170,15,0	1/1:1,13:8:15.04:169,15,0	1/1:0,16:5:15.04:170,15,0	1/1:1,23:9:21.06:238,21,0	1/1:1,12:13:30.08:340,30,0	1/1:1,10:10:27.08:306,27,0	1/1:1,13:8:21.03:225,21,0	1/1:0,15:8:17.97:176,18,0	1/1:4,29:30:69.20:783,69,0	1/1:0,8:5:8.98:88,9,0	1/1:0,11:7:18.05:204,18,0	1/1:2,19:19:39.11:440,39,0	1/1:4,9:12:18.05:204,18,0	1/1:3,10:12:30.05:320,30,0	1/1:2,8:6:18.04:195,18,0	1/1:1,8:8:21.06:238,21,0
chr10	110337872	.	AAC	A	1011.04	PASS	AB=0.894;AC=36;AF=0.750;AN=48;BaseQRankSum=2.174;DP=240;FS=1.207;HRun=0;HaplotypeScore=37.2190;InbreedingCoeff=0.2031;MQ=37.13;MQ0=69;MQRankSum=-0.835;QD=6.02;ReadPosRankSum=0.901;VQSLOD=2.5117;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,5:14:20.69:181,21,0	0/0:2,0:2:3.01:0,3,45	./.	./.	0/0:3,0:3:5.93:0,6,54	0/0:6,0:6:3.01:0,3,32	0/1:10,1:13:24.09:24,0,37	./.	1/1:5,1:5:2.87:33,3,0	0/1:8,0:7:21.34:21,0,39	0/1:4,1:5:21.04:21,0,103	1/1:1,0:2:2.84:14,3,0	./.	1/1:1,0:1:2.84:14,3,0	1/1:3,0:1:2.84:14,3,0	0/1:2,1:4:24.04:24,0,62	1/1:11,7:17:14.70:125,15,0	1/1:5,3:3:9.02:99,9,0	1/1:10,0:6:14.64:103,15,0	1/1:2,2:4:2.92:33,3,0	1/1:17,7:20:9.50:100,9,0	1/1:1,0:4:5.68:28,6,0	1/1:5,0:3:3.44:20,3,0	1/1:6,0:9:11.79:56,12,0	0/0:6,0:10:6:0,6,53	1/1:3,3:7:11.83:101,12,0	1/1:4,1:4:8.86:80,9,0	1/1:2,1:4:8.69:61,9,0
chr10	110340274	.	CAA	C	1264.69	PASS	AC=14;AF=0.269;AN=52;BaseQRankSum=5.610;DP=638;FS=5.778;HRun=3;HaplotypeScore=57.5115;InbreedingCoeff=0.9206;MQ=35.39;MQ0=178;MQRankSum=0.878;QD=11.82;ReadPosRankSum=-1.192;VQSLOD=-0.0575;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:31:93.32:0,93,1775	0/0:13,0:9:24.05:0,24,395	./.	./.	0/0:46,0:30:84.12:0,84,1378	0/0:29,0:27:72.25:0,72,1380	0/0:20,0:13:30.06:0,30,523	0/0:56,0:4:12.04:0,12,213	0/0:19,0:15:39.08:0,39,712	0/0:30,0:23:66.22:0,66,1239	0/0:25,0:14:42.13:0,42,742	1/1:1,7:5:9.03:137,9,0	1/1:2,11:7:18.06:265,18,0	1/1:4,4:3:3.01:36,3,0	1/1:3,16:11:18.06:274,18,0	0/0:19,0:17:39.12:0,39,688	0/0:37,0:28:54.13:0,54,1022	0/0:37,0:24:57.17:0,57,1050	0/0:20,0:13:39.13:0,39,717	0/0:41,0:29:84.09:0,84,1426	0/0:16,0:8:21.07:0,21,405	1/1:7,16:15:27.09:411,27,0	1/1:5,15:11:15.05:229,15,0	1/1:7,9:6:6.02:91,6,0	0/0:14,0:7:21.07:0,21,404	0/0:37,0:28:84.26:0,84,1498	0/0:18,0:16:42.14:0,42,809	0/0:12,0:9:27.09:0,27,520
chr10	110340534	.	T	TA	1765.51	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-8.834;DP=500;FS=9.832;HRun=7;HaplotypeScore=80.4491;InbreedingCoeff=0.9803;MQ=62.39;MQ0=2;MQRankSum=1.196;QD=22.35;ReadPosRankSum=0.581;VQSLOD=3.0494;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:33.03:0,33,312	0/0:3,0:3:9.01:0,9,87	0/0:11,0:10:22.27:0,22,201	0/0:17,0:16:38.93:0,39,376	1/1:2,20:22:48.11:563,48,0	1/1:3,16:18:39.05:440,39,0	1/1:0,23:23:42.10:506,42,0	0/0:21,0:21:51.08:0,51,492	0/0:12,0:12:33.05:0,33,319	0/0:17,0:17:39.06:0,39,376	0/0:23,0:23:48.04:0,48,452	0/0:21,0:21:38.90:0,39,376	0/0:13,0:13:33.05:0,33,319	0/0:8,0:7:21.03:0,21,203	0/0:25,0:25:56.97:0,57,545	0/0:19,0:19:48.05:0,48,464	0/0:30,0:30:72.10:0,72,694	0/0:26,0:27:64.17:0,64,591	0/0:20,0:18:45.07:0,45,435	0/0:13,0:13:33.05:0,33,318	0/0:15,0:15:36.05:0,36,348	0/0:11,0:10:21.03:0,21,203	0/0:18,0:17:36.05:0,36,348	0/0:18,0:18:51.08:0,51,492	1/1:3,12:15:36.08:417,36,0	0/0:14,0:14:36.06:0,36,348	0/0:26,0:25:72.08:0,72,682	0/0:22,0:22:66.11:0,66,637
chr10	110342028	.	AG	A	4530.20	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.291;DP=582;FS=1.261;HRun=2;HaplotypeScore=59.7679;InbreedingCoeff=0.9997;MQ=66.60;MQ0=0;MQRankSum=-2.259;QD=34.58;ReadPosRankSum=2.348;VQSLOD=5.1646;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.31:0,93,1384	0/0:10,0:10:27.09:0,27,402	0/0:18,0:19:46.63:0,47,588	0/0:19,0:18:54.18:0,54,775	0/0:28,0:28:84.27:0,84,1234	0/0:24,0:24:66.22:0,66,986	0/0:10,0:10:30.09:0,30,430	0/0:23,0:23:69.22:0,69,1008	0/0:25,0:25:69.23:0,69,1032	0/0:20,0:20:60.20:0,60,899	0/0:21,0:21:60.20:0,60,889	1/1:0,16:16:42.14:544,42,0	1/1:0,18:18:45.15:584,45,0	1/1:0,17:17:45.15:583,45,0	1/1:0,24:24:66.21:856,66,0	0/0:16,0:16:48.16:0,48,717	0/0:23,0:23:63.18:0,63,899	0/0:14,0:14:39.13:0,39,584	0/0:23,0:23:66.17:0,66,943	0/0:28,0:28:78.26:0,78,1166	0/0:18,0:18:54.18:0,54,808	1/1:1,15:16:45.15:584,45,0	1/1:1,21:22:54.11:679,54,0	1/1:0,18:18:54.18:701,54,0	0/0:27,0:27:81.26:0,81,1187	0/0:30,0:30:87.28:0,87,1282	0/0:22,0:22:63.21:0,63,936	0/0:19,0:19:57.15:0,57,809
chr10	110342115	.	TG	T	4902.95	PASS	AC=42;AF=0.778;AN=54;BaseQRankSum=-1.311;DP=339;FS=32.943;HRun=8;HaplotypeScore=79.2688;InbreedingCoeff=0.9543;MQ=67.16;MQ0=1;MQRankSum=-5.346;QD=22.80;ReadPosRankSum=1.775;VQSLOD=3.1304;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,8:10:24.04:230,24,0	0/0:4,0:4:9.02:0,9,97	0/0:36,0:30:60.61:0,61,620	0/0:25,0:16:18.91:0,19,218	1/1:1,14:15:42:391,42,0	1/1:4,11:15:30.04:289,30,0	1/1:3,4:7:15.02:145,15,0	1/1:9,9:18:36.04:343,36,0	1/1:0,6:6:15.02:144,15,0	0/0:29,0:29:66.16:0,66,780	0/0:19,0:19:45.10:0,45,524	1/1:3,7:10:21.03:202,21,0	1/1:2,7:9:21.03:202,21,0	./.	1/1:3,8:11:24.03:231,24,0	0/0:9,0:9:18.06:0,18,217	1/1:3,12:15:29.98:278,30,0	1/1:1,2:3:8.99:80,9,0	1/1:5,12:17:39.06:376,39,0	1/1:4,7:11:24.04:231,24,0	1/1:1,7:8:24.02:225,24,0	1/1:1,8:9:24.04:231,24,0	1/1:0,10:10:29.99:278,30,0	1/1:1,4:5:12.02:116,12,0	1/1:2,8:10:26.97:244,27,0	1/1:2,9:11:27.04:260,27,0	1/1:1,7:8:21.03:202,21,0	1/1:0,7:7:21.03:203,21,0
chr10	110342136	.	T	TG	1056.79	PASS	AB=0.773;AC=12;AF=0.214;AN=56;BaseQRankSum=-9.784;DP=299;FS=58.003;HRun=0;HaplotypeScore=111.7595;InbreedingCoeff=-0.2975;MQ=52.45;MQ0=0;MQRankSum=-6.647;QD=6.91;ReadPosRankSum=4.359;VQSLOD=0.8153;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:30:0,30,373	0/1:4,1:5:21.34:21,0,131	0/0:18,0:17:46.63:0,47,582	0/0:13,0:10:24.08:0,24,330	0/1:11,4:15:33.77:34,0,354	0/0:11,1:11:32.95:0,33,373	0/1:3,2:5:57.66:58,0,110	0/0:13,0:13:39.09:0,39,508	0/0:7,0:7:21.03:0,21,270	0/1:21,3:24:70.71:71,0,752	0/1:14,8:22:99:142,0,391	0/0:9,0:9:26.98:0,27,313	0/0:8,1:9:22.98:0,23,268	0/0:2,0:2:5.99:0,6,63	0/0:9,0:9:27:0,27,317	0/1:7,1:8:22.52:23,0,205	0/0:13,0:13:32.83:0,33,309	0/0:3,0:3:7.23:0,7,65	0/0:12,0:12:33.03:0,33,419	0/1:8,4:12:99:119,0,253	0/0:7,0:7:11.99:0,12,130	0/1:8,2:10:76.89:77,0,190	0/1:10,5:15:84.03:84,0,292	0/0:3,0:3:3:0,3,25	0/1:7,9:16:99:279,0,223	0/1:8,3:11:99:107,0,286	0/0:4,0:5:10.24:0,10,143	0/1:5,5:10:99:194,0,161
chr10	110343611	.	TA	T	10937.59	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=6.007;DP=576;FS=3.736;HRun=5;HaplotypeScore=78.6965;InbreedingCoeff=0.9995;MQ=90.43;MQ0=0;MQRankSum=-4.061;QD=31.25;ReadPosRankSum=2.930;VQSLOD=5.6289;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,39:40:99:1293,114,0	0/0:10,0:10:30.10:0,30,409	0/0:23,0:23:57.17:0,57,743	0/0:24,0:24:57:0,57,720	1/1:2,26:28:78.22:885,78,0	1/1:0,14:14:39.11:442,39,0	1/1:1,25:26:75.21:851,75,0	1/1:4,34:38:99:1127,102,0	1/1:1,16:17:48.14:544,48,0	0/0:25,0:25:57.19:0,57,779	0/0:13,0:13:39.13:0,39,531	0/0:10,0:10:30.10:0,30,410	0/0:12,0:12:36.11:0,36,478	0/0:15,0:15:42.14:0,42,574	0/0:15,0:15:45.15:0,45,616	0/0:8,0:8:24.08:0,24,328	1/1:0,21:21:60.17:681,60,0	1/1:0,15:15:33.09:374,33,0	1/1:2,12:14:36.10:408,36,0	1/1:1,30:31:84.24:950,84,0	1/1:0,22:22:60.17:680,60,0	0/0:17,0:17:45.15:0,45,615	0/0:20,0:20:60.18:0,60,788	0/0:34,0:33:99:0,99,1328	1/1:1,24:25:66.19:749,66,0	1/1:2,15:17:47.97:524,48,0	1/1:0,25:25:75.21:851,75,0	1/1:0,17:17:51.15:578,51,0
chr10	110344665	.	TTTACTTACTTAC	T	5542.06	PASS	AB=0.904;AC=42;AF=0.808;AN=52;BaseQRankSum=9.543;DP=638;FS=11.352;HRun=0;HaplotypeScore=226.1840;InbreedingCoeff=0.5254;MQ=71.15;MQ0=1;MQRankSum=-7.792;QD=11.08;ReadPosRankSum=1.712;VQSLOD=2.3635;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:33:9.03:248,9,0	0/0:13,0:13:21.05:0,21,989	./.	./.	1/1:20,0:31:14.97:291,15,0	1/1:13,0:15:6.02:168,6,0	1/1:20,0:20:4.57:52,5,0	0/1:29,0:29:0:0,0,0	1/1:18,0:25:9.03:251,9,0	0/0:33,0:33:63.22:0,63,3321	0/0:21,0:22:48.16:0,48,2602	1/1:20,6:26:8.71:305,9,0	1/1:13,5:18:6.02:203,6,0	1/1:16,13:29:30.10:989,30,0	1/1:13,14:27:18.06:552,18,0	0/0:23,0:23:42.14:0,42,2292	1/1:19,0:24:3.01:84,3,0	1/1:15,0:22:3.01:84,3,0	1/1:20,0:20:3.01:45,3,0	1/1:18,0:26:9.03:251,9,0	1/1:21,0:21:2.04:41,2,0	1/1:12,7:19:6.02:170,6,0	1/1:13,7:20:15.05:355,15,0	1/1:21,0:21:3.01:48,3,0	1/1:12,0:23:27.07:582,27,0	0/1:16,0:21:99:320,0,159	1/1:11,0:20:12.04:335,12,0	1/1:4,0:8:6.02:168,6,0
chr10	110346116	.	A	AC	128.54	PASS	AB=0.856;AC=15;AF=0.268;AN=56;BaseQRankSum=4.496;DP=312;FS=2.761;HRun=0;HaplotypeScore=46.5896;InbreedingCoeff=0.4752;MQ=80.09;MQ0=0;MQRankSum=0.430;QD=1.29;ReadPosRankSum=-0.311;VQSLOD=1.5483;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:22.56:0,23,287	0/0:6,0:6:15.05:0,15,190	0/0:21,0:20:22.42:0,22,465	0/0:18,0:16:15.50:0,16,366	1/1:8,0:7:4.09:20,4,0	1/1:5,0:5:0.56:16,1,0	0/1:21,1:23:5.53:27,0,6	0/0:12,0:12:16.38:0,16,417	0/0:12,0:12:17.42:0,17,214	0/0:6,0:6:15.05:0,15,207	0/0:15,0:15:39.04:0,39,469	0/1:4,7:11:1.67:9,0,2	0/1:6,3:9:4.94:17,0,5	1/1:11,0:11:7.74:46,8,0	0/1:12,0:12:3.25:39,0,3	0/0:13,0:13:36.12:0,36,490	0/0:22,0:22:32.81:0,33,391	0/0:13,0:13:39.07:0,39,451	0/0:14,0:14:16.54:0,17,429	0/0:9,0:9:24.03:0,24,292	0/0:10,1:11:30.07:0,30,380	1/1:7,0:7:3.04:38,3,0	0/0:6,0:6:2.78:0,3,12	0/1:7,0:7:6.55:35,0,7	1/1:4,3:7:2.81:34,3,0	0/0:9,0:10:24.08:0,24,332	0/0:6,0:5:15.03:0,15,171	0/0:2,0:2:6:0,6,64
chr10	110347045	.	CGGGGTTGGGGATTTAGCTCAGT	C	3016.36	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.285;DP=456;FS=6.281;HRun=0;HaplotypeScore=254.1240;InbreedingCoeff=0.9189;MQ=64.53;MQ0=1;MQRankSum=-6.563;QD=51.12;ReadPosRankSum=1.022;VQSLOD=2.3467;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:93.24:0,93,7637	0/0:3,0:3:6.02:0,6,615	0/0:24,0:17:18.06:0,18,1125	0/0:17,0:17:24.05:0,24,1051	1/1:7,7:14:12.04:539,12,0	1/1:6,6:12:12.04:700,12,0	1/1:9,4:13:9.03:525,9,0	0/0:22,0:22:42.14:0,42,2398	0/0:15,0:15:30.10:0,30,2756	0/0:19,0:19:45.14:0,45,3042	0/0:18,0:18:36.12:0,36,3246	0/0:18,0:18:36.11:0,36,2904	0/0:14,0:14:33.10:0,33,2701	0/0:17,0:17:45.14:0,45,3864	0/0:16,0:15:30.10:0,30,2835	0/0:7,0:7:18.04:0,18,1098	0/0:24,0:24:45.15:0,45,3933	0/0:9,0:9:21.07:0,21,1716	0/0:11,0:11:12.04:0,12,794	0/0:13,0:13:33.08:0,33,2618	0/0:27,0:27:63.15:0,63,5039	0/0:12,0:12:18.06:0,18,1611	0/0:12,0:12:33.11:0,33,2836	0/0:18,0:18:39.13:0,39,3640	1/1:8,12:20:24.08:1401,24,0	0/0:18,0:18:42.14:0,42,3356	0/0:17,0:17:33.10:0,33,2915	0/0:7,0:7:21.07:0,21,2069
chr10	110347232	.	GACAC	G	434.53	PASS	AB=0.745;AC=10;AF=0.217;AN=46;BaseQRankSum=-0.288;DP=416;FS=3.948;HRun=0;HaplotypeScore=80.3289;InbreedingCoeff=0.5340;MQ=64.10;MQ0=18;MQRankSum=0.464;QD=4.78;ReadPosRankSum=0.952;VQSLOD=1.7289;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,2:21:3.01:46,3,0	0/0:9,0:9:12.01:0,12,191	./.	./.	0/0:21,0:21:27.03:0,27,345	0/0:21,0:20:26.88:0,27,383	0/0:12,0:16:11.98:0,12,164	./.	0/1:11,5:17:6.42:22,0,6	0/0:23,0:23:29.87:0,30,426	0/0:12,0:12:21.07:0,21,377	0/0:6,0:14:3.01:0,3,52	0/0:9,0:9:7.80:0,8,51	0/0:11,0:11:11.98:0,12,118	0/0:13,0:11:13.04:0,13,109	0/0:7,0:7:12.04:0,12,258	1/1:11,7:17:17.06:249,17,0	./.	./.	0/1:8,4:12:1.05:133,0,1	0/0:17,0:16:2.80:0,3,44	0/0:15,0:15:11.93:0,12,142	0/0:18,0:17:6.02:0,6,98	0/0:12,0:11:18.05:0,18,224	0/0:18,0:19:20.40:0,20,259	1/1:15,0:14:3:27,3,0	1/1:2,5:7:6.02:92,6,0	0/0:8,0:7:2.46:0,2,22
chr10	110348008	.	G	GGTGT	4261.67	PASS	AB=0.833;AC=31;AF=0.620;AN=50;BaseQRankSum=0.028;DP=777;FS=7.340;HRun=0;HaplotypeScore=169.2801;InbreedingCoeff=-0.0662;MQ=60.79;MQ0=10;MQRankSum=-1.167;QD=7.16;ReadPosRankSum=-1.717;VQSLOD=3.2313;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,9:33:2.97:71,3,0	0/0:11,0:12:15.04:0,15,215	./.	./.	./.	1/1:29,0:28:15.68:241,16,0	1/1:17,0:16:11.93:146,12,0	1/1:34,0:33:14.97:161,15,0	0/1:17,9:27:28.79:325,0,29	0/0:39,0:39:9.11:0,9,324	0/0:15,0:16:10.58:0,11,124	0/1:24,0:28:83.69:144,0,84	0/1:16,1:26:34.90:238,0,35	0/1:24,0:27:25.88:66,0,26	0/1:17,0:24:28.96:29,0,69	0/1:32,0:30:31.83:32,0,455	0/1:18,12:40:99:467,0,134	0/1:16,2:19:66.78:395,0,67	1/1:17,0:18:6:75,6,0	1/1:21,0:21:18.03:241,18,0	1/1:58,2:60:15.40:618,15,0	0/1:26,0:28:62.08:62,0,70	0/0:16,0:21:0.48:0,0,56	0/1:30,0:32:39.06:178,0,39	1/1:20,0:20:5.81:35,6,0	1/1:24,12:37:26.18:503,26,0	0/1:15,0:20:16.42:78,0,16	1/1:8,0:11:12.97:156,13,0
chr10	110348047	.	GTCCC	G	832.59	PASS	AB=0.941;AC=12;AF=0.222;AN=54;BaseQRankSum=2.554;DP=825;FS=62.128;HRun=0;HaplotypeScore=168.1667;InbreedingCoeff=-0.2940;MQ=48.06;MQ0=33;MQRankSum=-2.154;QD=2.50;ReadPosRankSum=-3.223;VQSLOD=-0.6685;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,1:34:54.38:0,54,1151	0/0:11,0:11:32.95:0,33,680	0/0:58,4:12:25.25:0,25,479	0/0:72,3:16:34.91:0,35,675	./.	0/1:22,3:22:99:172,0,158	0/1:25,4:28:91.47:91,0,293	0/0:40,0:35:4.82:0,5,1564	0/0:36,0:36:80.94:0,81,1685	0/0:29,0:29:28.44:0,28,1552	0/0:14,0:13:36.11:0,36,766	0/1:24,0:23:99:115,0,333	0/0:30,0:29:44.44:0,44,602	0/1:28,0:28:38.92:39,0,373	0/0:20,0:20:32.94:0,33,363	0/0:38,2:38:53.94:0,54,2343	0/1:40,0:39:20.52:21,0,1557	0/0:22,0:22:52.01:0,52,1288	0/1:8,0:8:2.87:3,0,409	0/1:23,1:24:68.80:69,0,1094	0/1:60,0:56:91.96:92,0,2266	0/0:25,2:26:40.54:0,41,415	0/0:21,0:20:2.43:0,2,185	0/1:34,2:37:99:142,0,506	0/1:15,10:25:53.28:53,0,176	0/1:22,0:21:93.31:93,0,900	0/0:13,0:13:30.50:0,31,617	0/1:10,1:10:86.78:87,0,303
chr10	110348232	.	ATG	A	3792.30	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=13.429;DP=1084;FS=25.409;HRun=0;HaplotypeScore=276.2967;InbreedingCoeff=0.9824;MQ=48.57;MQ0=33;MQRankSum=-6.162;QD=11.63;ReadPosRankSum=0.480;VQSLOD=1.7822;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:52:99:0,126,2105	0/0:9,0:9:27.05:0,27,429	0/0:68,0:15:23.98:0,24,471	0/0:67,2:17:39.58:0,40,614	1/1:5,15:19:15.01:190,15,0	1/1:4,13:17:20.96:225,21,0	1/1:13,17:29:17.77:153,18,0	0/0:53,0:51:99:0,123,2070	0/0:58,0:58:99:0,139,2385	0/0:48,0:48:99:0,117,1954	0/0:30,0:29:81.24:0,81,1301	1/1:17,32:48:59.36:644,59,0	1/1:14,21:34:56.30:646,56,0	1/1:11,27:37:63.13:716,63,0	1/1:12,25:35:36.62:406,37,0	0/0:49,0:48:99:0,120,2008	0/0:42,0:41:99:0,112,1864	0/0:29,0:29:82.75:0,83,1330	0/0:27,0:18:45.15:0,45,770	0/0:31,0:31:75.24:0,75,1283	0/0:117,0:115:99:0,268,4659	1/1:5,23:28:30.04:342,30,0	1/1:4,20:24:12.69:171,13,0	1/1:18,16:33:11.84:157,12,0	1/1:5,9:14:12.02:142,12,0	0/0:39,0:39:99:0,99,1645	0/0:18,0:18:45.15:0,45,768	0/0:15,0:15:33.07:0,33,522
chr10	110348239	.	TGA	T	1634.97	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.059;DP=1085;FS=30.832;HRun=0;HaplotypeScore=304.4937;InbreedingCoeff=0.9697;MQ=48.03;MQ0=28;MQRankSum=-5.389;QD=5.00;ReadPosRankSum=-0.341;VQSLOD=1.5256;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:56:99:0,129,2269	0/0:10,0:10:27.05:0,27,428	0/0:71,0:14:14.58:0,15,368	0/0:66,0:16:36.89:0,37,538	1/1:21,0:20:14.56:88,15,0	1/1:18,0:17:20.27:119,20,0	1/1:26,1:26:11.42:75,11,0	0/0:48,0:47:99:0,135,2351	0/0:63,1:63:99:0,134,2457	0/0:42,0:42:99:0,123,2160	0/0:31,0:30:82.93:0,83,1307	1/1:48,0:46:56.64:315,57,0	1/1:35,1:35:57.20:339,57,0	1/1:39,0:38:59.84:345,60,0	1/1:38,0:36:33.54:196,34,0	0/0:50,0:49:99:0,129,2241	0/0:41,0:40:93.45:0,93,1888	0/0:28,0:28:76.72:0,77,1308	0/0:29,0:19:54.60:0,55,857	0/0:33,0:33:84.24:0,84,1471	0/0:115,0:113:99:0,274,4927	1/1:32,0:32:29.40:182,29,0	1/1:24,0:24:9.32:62,9,0	1/1:30,1:29:11.39:63,11,0	1/1:13,0:13:11.78:72,12,0	0/0:37,0:37:99:0,105,1764	0/0:20,0:20:57.08:0,57,858	0/0:14,0:14:16.82:0,17,497
chr10	110348241	.	AGT	A	2596.42	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.872;DP=1086;FS=13.346;HRun=0;HaplotypeScore=303.8026;InbreedingCoeff=0.9126;MQ=47.88;MQ0=27;MQRankSum=-8.493;QD=8.01;ReadPosRankSum=1.174;VQSLOD=1.8998;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:57:99:0,125,2048	0/0:9,0:9:21.07:0,21,344	0/0:69,1:14:20.82:0,21,270	0/0:68,0:15:25.17:0,25,366	1/1:5,16:20:2.97:37,3,0	1/1:4,14:17:17.85:200,18,0	1/1:10,16:25:8.15:67,8,0	0/0:50,0:49:99:0,132,2125	0/0:62,1:62:99:0,102,2108	0/0:44,0:44:99:0,123,1993	0/0:28,1:28:72.23:0,72,1147	1/1:8,37:44:58.29:559,58,0	1/1:10,27:36:51.23:520,51,0	1/1:11,28:38:60.04:616,60,0	1/1:9,28:35:11.16:256,11,0	0/0:52,0:51:99:0,132,2122	0/0:38,2:39:60.80:0,61,1555	0/0:26,0:26:68.24:0,68,1058	0/0:29,0:19:45.15:0,45,749	0/0:33,0:33:84.27:0,84,1369	0/0:116,0:115:99:0,268,4304	1/1:4,28:32:27:285,27,0	1/1:3,21:24:3.67:61,4,0	1/1:15,16:30:5.82:74,6,0	1/1:3,10:13:12.01:133,12,0	0/0:38,0:38:96.31:0,96,1567	0/0:20,0:20:51.11:0,51,747	0/0:14,0:14:27.04:0,27,392
chr10	110348266	.	C	CTG	3698.58	PASS	AB=0.811;AC=22;AF=0.393;AN=56;BaseQRankSum=14.396;DP=1123;FS=7.150;HRun=0;HaplotypeScore=372.2334;InbreedingCoeff=0.8326;MQ=47.42;MQ0=30;MQRankSum=-12.643;QD=10.08;ReadPosRankSum=-1.909;VQSLOD=2.1355;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:67,1:67:99:0,123,1573	0/0:10,0:10:27.09:0,27,350	0/0:52,0:12:24.07:0,24,295	0/0:47,0:15:12.99:0,13,221	1/1:4,16:19:6:102,6,0	1/1:7,19:24:21.07:354,21,0	1/1:11,16:26:2.98:51,3,0	0/0:56,0:54:99:0,116,1475	0/0:58,0:57:99:0,133,1669	0/0:59,0:59:99:0,168,2123	0/0:25,0:24:54.16:0,54,687	1/1:12,44:53:59.84:927,60,0	1/1:9,34:42:55.03:860,55,0	1/1:16,25:40:30.10:499,30,0	1/1:12,33:44:17.98:300,18,0	0/0:61,0:60:99:0,132,1713	0/0:39,0:38:99:0,105,1308	0/0:27,0:27:25.14:0,25,703	0/0:37,0:29:74.45:0,74,941	0/0:39,0:38:81.22:0,81,1014	0/0:125,1:124:99:0,273,3479	1/1:8,29:37:21.03:349,21,0	1/1:10,16:26:8.02:105,8,0	0/1:9,14:20:0.03:0,0,0	1/1:5,7:12:9.01:124,9,0	0/0:35,0:33:84.27:0,84,1091	0/0:16,0:16:39.12:0,39,506	0/1:11,0:11:26.68:27,0,184
chr10	110348283	.	T	TTG	1883.77	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.744;DP=1127;FS=7.345;HRun=0;HaplotypeScore=384.7588;InbreedingCoeff=0.9381;MQ=49.66;MQ0=21;MQRankSum=-4.614;QD=5.06;ReadPosRankSum=-8.097;VQSLOD=0.6929;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:63:99:0,103,1266	0/0:13,0:13:33.10:0,33,418	0/0:57,0:21:47.99:0,48,510	0/0:42,0:17:38.36:0,38,426	1/1:19,2:22:6.69:89,7,0	1/1:23,4:25:25.49:192,25,0	1/1:18,2:20:13.42:97,13,0	0/0:58,0:55:99:0,120,1546	0/0:53,0:54:99:0,121,1606	0/0:70,0:70:99:0,166,2113	0/0:25,0:24:60.02:0,60,741	1/1:55,3:56:36.31:315,36,0	1/1:39,4:43:46.09:394,46,0	1/1:40,1:40:26.19:240,26,0	1/1:49,2:50:33.56:378,34,0	0/0:55,0:54:99:0,141,1807	0/0:43,0:42:99:0,105,1321	0/0:22,0:23:45.40:0,45,719	0/0:35,0:33:78.22:0,78,981	0/0:36,0:35:75.24:0,75,969	0/0:111,0:110:99:0,237,3027	1/1:38,3:42:3.01:36,3,0	1/1:22,1:23:7.83:76,8,0	1/1:26,2:27:15.04:168,15,0	1/1:14,0:14:12.02:115,12,0	0/0:30,0:29:63.13:0,63,783	0/0:23,0:23:60.18:0,60,771	0/0:10,0:11:15.86:0,16,234
chr10	110348291	.	GTA	G	2232.82	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.676;DP=1104;FS=14.669;HRun=0;HaplotypeScore=366.3985;InbreedingCoeff=0.9027;MQ=49.82;MQ0=18;MQRankSum=-3.158;QD=8.24;ReadPosRankSum=-3.409;VQSLOD=2.1036;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:59:99:0,103,1886	0/0:13,0:13:37.94:0,38,689	0/0:56,0:22:44.96:0,45,781	0/0:48,0:20:38.98:0,39,662	0/0:21,0:21:14.44:0,14,68	0/0:27,0:25:23.65:0,24,105	0/0:20,0:20:12.65:0,13,62	0/0:59,0:55:99:0,133,2255	0/0:52,0:52:99:0,126,2282	0/0:67,0:67:99:0,194,3255	0/0:26,0:25:74.04:0,74,1168	1/1:11,42:51:47.13:512,47,0	1/1:13,29:42:66.84:610,67,0	1/1:10,27:36:41.85:469,42,0	1/1:9,40:48:35.97:489,36,0	0/0:57,0:56:99:0,156,2668	0/0:41,0:40:99:0,111,1816	0/0:25,0:25:41.51:0,42,1007	0/0:32,0:29:81.10:0,81,1197	0/0:37,0:36:90.18:0,90,1494	0/0:108,0:105:99:0,250,4237	1/1:16,24:40:3.01:43,3,0	1/1:7,12:19:3.28:81,3,0	1/1:10,21:29:15.05:214,15,0	0/0:16,0:16:5.56:0,6,25	0/0:32,0:31:90.13:0,90,1340	0/0:24,0:24:68.88:0,69,1126	0/0:11,0:11:19.02:0,19,332
chr10	110348301	.	GTGTC	G	2576.59	PASS	AB=0.972;AC=16;AF=0.286;AN=56;BaseQRankSum=10.509;DP=1108;FS=7.895;HRun=0;HaplotypeScore=387.2855;InbreedingCoeff=0.7877;MQ=49.98;MQ0=25;MQRankSum=-2.841;QD=8.15;ReadPosRankSum=-5.025;VQSLOD=0.5317;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:54:97.17:0,97,2475	0/0:16,0:16:48.12:0,48,1044	0/0:61,0:25:12.54:0,13,1135	0/0:54,0:20:35.44:0,35,934	0/1:20,0:20:5.41:5,0,134	0/0:26,0:24:25.96:0,26,239	0/0:22,0:22:10.23:0,10,110	0/0:59,0:54:99:0,144,3166	0/0:55,0:53:99:0,103,3001	0/0:67,0:66:99:0,195,4889	0/0:26,0:25:69.20:0,69,1750	1/1:51,1:50:45.32:462,45,0	1/1:40,3:43:69.31:595,69,0	1/1:38,1:38:53.46:554,53,0	1/1:48,2:49:45.95:543,46,0	0/0:57,0:57:99:0,157,3988	0/0:34,0:32:76.34:0,76,2323	0/0:24,0:24:29.49:0,29,1416	0/0:24,0:22:56.96:0,57,1320	0/0:37,0:36:81.03:0,81,2055	0/0:102,0:97:99:0,222,5551	1/1:32,6:38:5.99:64,6,0	1/1:20,2:22:5.12:144,5,0	1/1:33,2:33:24.08:336,24,0	0/1:16,0:17:64.39:64,0,76	0/0:30,0:28:81.23:0,81,1967	0/0:31,0:29:69.22:0,69,1704	0/0:10,0:10:16.96:0,17,415
chr10	110348303	.	GTC	G	3775.78	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=12.151;DP=1104;FS=5.249;HRun=0;HaplotypeScore=348.1817;InbreedingCoeff=0.9208;MQ=50.24;MQ0=26;MQRankSum=-3.688;QD=9.01;ReadPosRankSum=-4.502;VQSLOD=1.4505;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:54:99:0,100,1748	0/0:16,0:16:48.10:0,48,760	0/1:57,0:23:7.26:7,0,760	0/0:56,0:22:35.79:0,36,654	1/1:19,2:21:11.24:174,11,0	1/1:24,2:24:31.35:264,31,0	1/1:20,0:20:18.21:156,18,0	0/0:61,0:55:99:0,147,2254	0/0:56,0:54:99:0,117,2092	0/0:68,0:67:99:0,201,3529	0/0:26,0:25:71.72:0,72,1279	1/1:50,0:48:46.13:537,46,0	1/1:43,0:43:71.89:669,72,0	1/1:39,0:38:62.42:623,62,0	1/1:53,0:52:56.88:650,57,0	0/0:55,0:55:99:0,157,2903	0/0:34,0:32:76.23:0,76,1523	0/0:23,0:24:33.85:0,34,978	0/0:23,0:21:57.10:0,57,957	0/0:36,0:35:84.12:0,84,1427	0/0:101,0:96:99:0,224,3883	1/1:36,0:36:11.98:113,12,0	1/1:22,0:22:11.87:141,12,0	1/1:35,0:33:23.63:271,24,0	1/1:15,2:17:22.98:172,23,0	0/0:31,0:29:80.83:0,81,1366	0/0:31,0:29:69.20:0,69,1126	0/0:9,0:9:20.04:0,20,301
chr10	110348311	.	AGT	A	12209.70	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-1.324;DP=1139;FS=7.889;HRun=0;HaplotypeScore=306.0267;InbreedingCoeff=0.9753;MQ=49.73;MQ0=26;MQRankSum=5.125;QD=26.72;ReadPosRankSum=4.692;VQSLOD=4.1617;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,46:53:99:1307,101,0	0/0:14,0:14:42.14:0,42,703	0/0:57,0:21:45.07:0,45,679	0/0:65,0:23:36.01:0,36,663	0/0:23,0:23:39.13:0,39,649	0/0:26,0:24:38.76:0,39,650	0/0:20,0:20:21.06:0,21,350	1/1:13,50:57:99:1688,132,0	1/1:4,49:51:99:1380,105,0	0/0:71,0:70:99:0,199,3272	0/0:26,0:26:71.26:0,71,1162	0/0:52,0:50:47.87:0,48,716	0/0:44,0:44:71.32:0,71,970	0/0:41,0:40:69.23:0,69,1096	0/0:55,0:54:57.19:0,57,963	0/0:62,0:62:99:0,157,2629	1/1:9,25:32:39.66:995,40,0	1/1:5,16:21:44.73:562,45,0	1/1:4,16:18:26.01:565,26,0	1/1:3,34:36:78.25:1024,78,0	1/1:19,75:90:99:2546,195,0	0/0:44,0:44:33.11:0,33,552	0/0:24,0:24:25.64:0,26,412	0/0:33,0:33:27.09:0,27,452	0/0:21,0:21:26.18:0,26,508	1/1:3,33:34:41.81:1112,42,0	1/1:2,30:30:66.21:867,66,0	1/1:1,8:9:3.49:163,3,0
chr10	110348508	.	A	AGT	11812.78	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-11.312;DP=1254;FS=8.291;HRun=0;HaplotypeScore=194.1450;InbreedingCoeff=0.9970;MQ=54.56;MQ0=22;MQRankSum=7.789;QD=25.85;ReadPosRankSum=5.207;VQSLOD=4.8047;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:67,0:67:99:0,139,1781	0/0:20,0:20:51.14:0,51,617	0/0:37,0:10:15.01:0,15,171	0/0:49,0:16:20.17:0,20,188	1/1:3,30:33:45.15:748,45,0	1/1:5,23:28:42.14:698,42,0	1/1:9,19:31:36.12:576,36,0	0/0:55,0:48:81.24:0,81,998	0/0:54,0:54:99:0,136,1667	0/0:58,1:58:99:0,103,1766	0/0:28,0:28:75.22:0,75,920	1/1:8,42:51:52.48:1404,52,0	1/1:16,27:43:48.63:1282,49,0	1/1:8,28:37:51.17:832,51,0	1/1:15,51:65:70.01:1612,70,0	0/0:55,0:55:99:0,135,1646	0/0:45,0:46:99:0,100,1302	0/0:41,0:41:99:0,111,1363	0/0:32,0:27:60.18:0,60,734	0/0:38,0:38:84.25:0,84,1044	0/0:97,0:94:99:0,235,2852	1/1:6,40:47:40.33:1175,40,0	1/1:3,24:27:39.13:648,39,0	1/1:20,40:60:99:1841,114,0	1/1:3,26:30:60.21:997,60,0	0/0:60,0:58:99:0,151,1838	0/0:43,0:43:99:0,108,1331	0/0:16,0:16:42.13:0,42,527
chr10	110349609	.	TC	T	12373.48	PASS	AB=0.923;AC=23;AF=0.411;AN=56;BaseQRankSum=13.731;DP=820;FS=1.842;HRun=2;HaplotypeScore=97.8632;InbreedingCoeff=0.9519;MQ=66.94;MQ0=4;MQRankSum=-0.936;QD=35.76;ReadPosRankSum=4.660;VQSLOD=5.0389;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:96.33:0,96,1436	0/0:11,0:11:33.11:0,33,495	0/0:35,0:29:75.22:0,75,1028	0/0:41,0:35:96.29:0,96,1368	1/1:0,26:26:75.20:954,75,0	1/1:0,19:19:57.19:740,57,0	1/1:2,21:23:64.76:822,65,0	0/0:27,0:26:78.25:0,78,1149	0/0:32,0:32:96.33:0,96,1435	0/0:40,0:39:99:0,111,1619	0/0:22,0:22:63.21:0,63,944	1/1:0,27:27:78.25:1013,78,0	1/1:0,27:27:75.24:974,75,0	1/1:0,40:40:99:1558,120,0	1/1:1,50:51:99:1792,138,0	0/0:28,0:28:84.28:0,84,1248	0/0:28,0:28:55.52:0,56,1121	0/1:11,1:12:2.65:3,0,459	0/0:22,0:22:60.19:0,60,876	0/0:24,0:24:69.22:0,69,1008	0/0:45,0:45:99:0,120,1747	1/1:0,35:35:99:1324,102,0	1/1:0,26:26:78.25:1013,78,0	1/1:0,19:19:54.18:701,54,0	1/1:0,41:41:99:1480,114,0	0/0:42,0:41:99:0,120,1791	0/0:22,0:22:66.19:0,66,931	0/0:18,0:18:49.47:0,49,759
chr10	110349841	.	AT	A	13210.13	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=17.271;DP=857;FS=5.483;HRun=1;HaplotypeScore=87.2182;InbreedingCoeff=0.9999;MQ=89.85;MQ0=0;MQRankSum=-2.673;QD=38.74;ReadPosRankSum=4.709;VQSLOD=5.3360;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,2179	0/0:14,0:14:42.10:0,42,617	0/0:35,0:36:97.65:0,98,1592	0/0:28,0:28:47.12:0,47,1090	1/1:0,22:22:60.20:838,60,0	1/1:0,29:29:81.27:1132,81,0	1/1:0,27:27:72.24:1007,72,0	0/0:34,0:34:99:0,99,1560	0/0:48,0:48:99:0,144,2275	0/0:40,0:40:99:0,120,1837	0/0:18,0:18:54.14:0,54,814	1/1:0,37:37:99:1426,102,0	1/1:0,31:31:87.29:1216,87,0	1/1:0,33:33:96.32:1341,96,0	1/1:0,60:60:99:2223,160,0	0/0:30,0:30:90.29:0,90,1414	0/0:30,0:30:90.31:0,90,1428	0/0:20,0:20:57.19:0,57,911	0/0:25,0:25:75.25:0,75,1159	0/0:42,0:42:99:0,126,1967	0/0:29,0:29:84.27:0,84,1320	1/1:0,31:31:87.29:1216,87,0	1/1:0,17:17:39.13:545,39,0	1/1:0,32:32:96.32:1342,96,0	1/1:0,22:22:66.22:923,66,0	0/0:40,0:40:99:0,117,1849	0/0:25,0:25:75.24:0,75,1171	0/0:11,0:11:33.11:0,33,527
chr10	110350690	.	TA	T	5385.75	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.220;DP=488;FS=1.136;HRun=8;HaplotypeScore=60.3999;InbreedingCoeff=0.9749;MQ=76.16;MQ0=0;MQRankSum=0.446;QD=24.93;ReadPosRankSum=3.366;VQSLOD=5.6422;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.13:0,42,507	0/0:9,0:9:27.08:0,27,317	0/0:14,0:14:26.82:0,27,253	0/0:6,0:6:3.55:0,4,70	1/1:1,31:32:90.14:869,90,0	1/1:2,27:29:72.11:695,72,0	1/1:1,15:16:30.05:290,30,0	0/0:38,0:38:96.25:0,96,1113	0/0:9,0:9:24.07:0,24,290	0/0:24,0:24:60.18:0,60,725	0/0:19,0:19:48.10:0,48,534	1/1:3,10:13:27.04:261,27,0	1/1:1,15:16:45.07:434,45,0	1/1:0,14:14:39.01:366,39,0	1/1:1,18:19:48.08:463,48,0	0/0:11,0:11:30.09:0,30,362	0/0:17,0:17:42.13:0,42,507	0/0:24,0:24:72.15:0,72,840	0/0:10,0:10:26.99:0,27,297	0/0:19,0:19:51.16:0,51,616	0/0:14,0:14:33.10:0,33,399	1/1:1,18:19:48.02:454,48,0	1/1:0,23:23:59.92:569,60,0	1/1:1,17:18:51.08:492,51,0	1/1:0,17:17:51.08:492,51,0	0/0:23,0:23:63.19:0,63,761	0/0:14,0:14:42.13:0,42,507	0/0:6,0:6:18.06:0,18,217
chr10	110352578	.	A	ATCACCCG	7844.72	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-2.495;DP=754;FS=0.455;HRun=0;HaplotypeScore=191.0620;InbreedingCoeff=0.9998;MQ=66.79;MQ0=0;MQRankSum=-12.509;QD=74.71;ReadPosRankSum=-1.181;VQSLOD=4.7334;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,144,3663	0/0:10,0:10:30.10:0,30,779	0/0:27,0:27:69.20:0,69,1603	0/0:25,0:24:54.12:0,54,1232	1/1:19,18:42:78.27:2923,78,0	1/1:7,11:21:45.15:1615,45,0	1/1:8,10:20:51.09:1717,51,0	0/0:34,0:34:93.31:0,93,2294	0/0:33,0:33:84.29:0,84,2148	0/0:33,0:33:93.32:0,93,2382	0/0:25,0:25:69.24:0,69,1784	0/0:21,0:21:60.18:0,60,1453	0/0:23,0:23:69.21:0,69,1683	0/0:16,0:16:48.16:0,48,1247	0/0:19,0:18:54.16:0,54,1297	0/0:27,0:27:75.24:0,75,1888	0/0:40,0:40:99:0,111,2790	0/0:17,0:17:51.18:0,51,1297	0/0:27,0:27:72.21:0,72,1712	0/0:20,0:20:60.18:0,60,1411	0/0:44,0:44:99:0,120,3026	0/0:20,0:20:54.17:0,54,1348	0/0:19,0:19:57.20:0,57,1450	0/0:30,0:30:87.28:0,87,2173	1/1:7,11:22:42.12:1590,42,0	0/0:24,0:24:72.24:0,72,1770	0/0:37,0:37:96.25:0,96,2463	0/0:24,0:23:63.19:0,63,1456
chr10	110352638	.	G	GGAGA	18945.99	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-4.102;DP=721;FS=0.631;HRun=0;HaplotypeScore=155.0194;InbreedingCoeff=0.9532;MQ=87.53;MQ0=0;MQRankSum=-7.675;QD=53.37;ReadPosRankSum=1.524;VQSLOD=5.6136;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,32:49:90.27:2212,90,0	0/0:11,0:11:33.09:0,33,537	0/0:25,0:25:66.17:0,66,1040	0/0:38,0:39:80.17:0,80,1322	0/0:17,0:17:42.14:0,42,754	0/0:19,0:19:39.09:0,39,666	0/0:23,0:23:63.20:0,63,1078	1/1:10,14:27:63.20:1466,63,0	1/1:5,33:42:99:2633,105,0	0/0:27,0:27:63.20:0,63,1104	0/0:12,0:12:33.11:0,33,593	0/0:19,0:19:45.15:0,45,800	0/0:27,0:27:69.20:0,69,1192	0/0:19,0:19:51.17:0,51,912	0/0:27,0:27:81.27:0,81,1407	0/0:32,0:32:84.25:0,84,1423	1/1:4,29:34:78.27:2008,78,0	1/1:5,14:20:36.09:876,36,0	1/1:10,14:26:60.19:1422,60,0	1/1:2,24:26:57.20:1478,57,0	1/1:10,26:36:63.22:1635,63,0	0/0:14,0:14:42.13:0,42,726	0/0:14,0:14:33.11:0,33,582	0/0:34,0:34:99:0,99,1751	0/0:7,0:7:15.05:0,15,270	0/1:27,0:27:1.52:1285,0,2	1/1:10,32:45:97.84:2394,98,0	1/1:4,19:23:60.68:1535,61,0
chr10	110352639	.	G	GAGAA	14056.44	PASS	AB=0.843;AC=19;AF=0.339;AN=56;BaseQRankSum=9.101;DP=709;FS=0.619;HRun=0;HaplotypeScore=169.3873;InbreedingCoeff=0.7578;MQ=87.99;MQ0=0;MQRankSum=-8.351;QD=39.93;ReadPosRankSum=3.044;VQSLOD=5.0806;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:48,0:48:69.32:1497,69,0	0/0:11,0:11:33.11:0,33,612	0/0:25,0:25:69.22:0,69,1222	0/0:39,0:39:88.71:0,89,1489	0/0:17,0:17:42.14:0,42,797	0/0:17,0:17:42.08:0,42,740	0/0:23,0:23:63.22:0,63,1183	0/1:27,0:27:65.88:957,0,66	1/1:42,0:42:62.47:1840,62,0	0/0:24,0:24:69.22:0,69,1247	0/0:11,0:11:33.11:0,33,627	0/0:18,0:18:51.15:0,51,903	0/0:26,0:26:72.23:0,72,1320	0/0:19,0:19:51.17:0,51,968	0/0:27,0:27:81.28:0,81,1529	0/0:32,0:32:87.28:0,87,1595	1/1:34,0:34:59.30:1374,59,0	1/1:19,0:19:18.38:586,18,0	0/1:27,0:27:28.25:857,0,28	1/1:26,0:26:57.20:1065,57,0	1/1:34,0:34:27.30:1165,27,0	0/0:14,0:14:42.14:0,42,788	0/0:14,0:14:33.11:0,33,625	0/0:34,0:34:99:0,99,1872	0/0:6,0:6:15.05:0,15,285	0/1:3,24:28:23.86:1955,0,24	1/1:45,0:45:74.90:1688,75,0	1/1:22,0:22:60.20:1072,60,0
chr10	110358420	.	AGTT	A	2746.27	PASS	AB=0.991;AC=41;AF=0.732;AN=56;BaseQRankSum=-2.120;DP=351;FS=14.703;HRun=0;HaplotypeScore=140.7421;InbreedingCoeff=-0.1800;MQ=65.56;MQ0=2;MQRankSum=0.423;QD=8.56;ReadPosRankSum=-6.141;VQSLOD=-0.1225;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:7,1:8:6.07:98,6,0	0/1:9,0:9:39.75:40,0,77	0/0:30,0:11:6.40:0,6,284	0/1:26,2:18:10.12:10,0,126	0/1:16,0:17:11.96:73,0,12	1/1:13,1:14:22.05:245,22,0	0/1:16,1:15:3.64:119,0,4	1/1:17,1:16:27.08:330,27,0	1/1:9,0:9:6.03:178,6,0	0/1:20,0:20:52.30:93,0,52	0/1:10,0:10:51.62:95,0,52	0/1:7,0:7:1.29:84,0,1	0/1:4,0:4:0.90:22,0,1	1/1:14,0:14:7.42:152,7,0	1/1:9,0:9:6.17:78,6,0	0/1:19,0:19:86.16:86,0,178	1/1:12,1:13:5.17:133,5,0	0/1:7,0:7:1.03:16,0,1	1/1:2,8:9:21.72:217,22,0	0/1:15,0:15:11.65:188,0,12	1/1:8,0:8:16.67:125,17,0	1/1:12,0:12:8.52:98,9,0	0/1:9,0:9:8.50:23,0,8	1/1:8,0:8:9.03:126,9,0	1/1:7,0:7:12.57:91,13,0	1/1:11,0:11:17:129,17,0	0/1:13,0:13:30.59:31,0,31	1/1:5,0:5:3.73:12,4,0
chr10	110358429	.	AGG	A	594.53	PASS	AB=0.919;AC=18;AF=0.321;AN=56;BaseQRankSum=8.097;DP=361;FS=3.530;HRun=2;HaplotypeScore=146.5507;InbreedingCoeff=-0.3286;MQ=64.24;MQ0=6;MQRankSum=-3.918;QD=3.48;ReadPosRankSum=-0.263;VQSLOD=-0.7605;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,2:9:23.72:24,0,288	0/0:10,0:10:30.10:0,30,608	0/0:31,0:12:21.63:0,22,256	0/0:31,0:20:29.57:0,30,469	0/1:15,2:17:39.74:40,0,741	0/1:11,2:13:44.33:44,0,547	0/0:17,0:15:27.09:0,27,525	0/0:23,0:21:60.06:0,60,1045	0/1:7,1:8:77.48:77,0,200	0/0:18,0:18:51.18:0,51,1036	0/0:13,0:13:39.05:0,39,747	0/1:6,0:6:16.71:17,0,226	0/1:4,0:4:17.84:18,0,170	0/1:13,0:13:78.07:78,0,488	0/1:8,0:8:49.53:50,0,282	0/0:19,0:19:57.20:0,57,1155	0/1:10,1:12:1.42:1,0,374	0/0:10,0:10:27.09:0,27,516	0/1:10,1:9:25.35:25,0,258	0/1:10,5:15:99:124,0,467	0/0:7,1:8:18.37:0,18,272	0/1:11,0:11:61.98:62,0,456	0/0:9,0:9:15.05:0,15,301	0/1:7,0:7:5.38:5,0,50	0/1:5,1:6:18.56:19,0,286	0/1:10,2:12:86.36:86,0,454	0/1:13,0:13:40.85:41,0,568	1/1:6,0:6:2.35:41,2,0
chr10	110358436	.	G	GGAAAGAAAGAAA	17462.18	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=2.705;DP=438;FS=49.247;HRun=0;HaplotypeScore=209.4218;InbreedingCoeff=0.8542;MQ=52.79;MQ0=6;MQRankSum=-7.159;QD=55.26;ReadPosRankSum=-0.692;VQSLOD=2.8286;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:21.07:665,21,0	0/0:11,0:11:27.09:0,27,839	0/0:30,0:12:16.32:0,16,203	0/0:29,0:17:27.01:0,27,572	1/1:24,0:24:56.61:1229,57,0	1/1:13,0:13:27.05:701,27,0	1/1:19,0:17:18.06:384,18,0	1/1:37,0:35:69.11:1783,69,0	1/1:10,0:10:24.08:1014,24,0	0/0:20,0:20:42.14:0,42,1275	0/0:13,0:13:36.12:0,36,1167	1/1:13,0:13:36.11:1079,36,0	1/1:8,0:8:24.07:673,24,0	1/1:13,0:13:33.09:790,33,0	1/1:18,0:18:36.11:1023,36,0	0/0:19,0:19:45.15:0,45,1415	1/1:11,0:11:9.72:526,10,0	0/1:14,0:14:38.42:329,0,38	1/1:13,0:11:24.06:613,24,0	1/1:16,0:16:42.14:1399,42,0	1/1:9,0:9:9.03:204,9,0	1/1:12,0:12:15.03:469,15,0	1/1:11,0:11:18.05:242,18,0	1/1:7,0:7:9.03:195,9,0	1/1:13,0:13:33.06:683,33,0	1/1:17,0:17:33.11:1108,33,0	1/1:17,0:17:45.15:1670,45,0	1/1:1,5:9:12.04:681,12,0
chr10	110358457	.	GAGAA	G	953.59	PASS	AB=0.953;AC=16;AF=0.286;AN=56;BaseQRankSum=7.257;DP=486;FS=6.985;HRun=0;HaplotypeScore=165.3606;InbreedingCoeff=-0.3913;MQ=52.14;MQ0=8;MQRankSum=-6.254;QD=3.46;ReadPosRankSum=-2.315;VQSLOD=1.7400;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:33.12:33,0,380	0/0:12,0:12:33.11:0,33,824	0/0:27,0:13:14.07:0,14,464	0/0:20,0:15:31.46:0,31,695	0/1:27,0:27:46.24:46,0,946	0/0:17,0:17:15.36:0,15,737	0/1:21,0:19:57.44:57,0,458	0/1:34,0:37:99:119,0,1254	0/0:15,0:15:41.57:0,42,777	0/0:18,0:18:51.17:0,51,1317	0/0:21,0:21:63.17:0,63,1397	0/1:12,1:13:25.54:26,0,742	0/1:12,0:12:27.53:28,0,445	0/1:11,4:15:99:189,0,409	0/0:18,1:19:40.78:0,41,1056	0/0:22,0:22:66.23:0,66,1576	0/0:10,0:10:22.01:0,22,414	0/1:12,0:14:56.67:57,0,470	0/1:20,0:18:54.96:55,0,800	0/1:21,0:21:2.91:3,0,734	0/1:8,0:8:89.81:90,0,156	0/1:13,4:17:76.86:77,0,555	0/1:9,6:15:99:104,0,343	0/1:8,0:8:99:102,0,116	0/0:14,0:14:13.66:0,14,661	0/1:19,0:19:16.48:16,0,836	0/1:15,0:18:99:110,0,587	0/0:15,0:15:30.10:0,30,540
chr10	110359271	.	A	AT	6446.27	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-15.842;DP=516;FS=1.974;HRun=8;HaplotypeScore=63.6006;InbreedingCoeff=0.9190;MQ=67.74;MQ0=0;MQRankSum=-1.257;QD=27.79;ReadPosRankSum=-0.488;VQSLOD=5.2795;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:57.17:658,57,0	0/0:5,0:5:12.01:0,12,110	0/0:16,0:16:26.02:0,26,267	0/1:13,0:12:33.41:33,0,67	0/0:29,0:29:78.04:0,78,714	0/0:14,0:13:42.01:0,42,380	0/0:20,0:20:51:0,51,462	1/1:5,25:30:81.08:877,81,0	1/1:4,14:18:42.12:478,42,0	0/0:24,0:24:63.03:0,63,577	0/0:25,0:25:63.03:0,63,576	0/0:20,0:20:57:0,57,512	0/0:16,0:16:48.03:0,48,439	0/0:16,0:16:47.99:0,48,432	0/0:15,0:15:45.01:0,45,407	0/0:20,0:20:60.03:0,60,549	1/1:0,28:28:78.23:900,78,0	1/1:2,9:11:27.08:312,27,0	1/1:5,16:21:48.11:537,48,0	1/1:3,25:28:75.18:849,75,0	1/1:1,11:12:33.10:380,33,0	0/0:18,0:18:20.46:0,20,357	0/0:24,0:24:69.03:0,69,632	0/0:8,0:8:21.01:0,21,192	0/0:14,0:14:33.01:0,33,302	1/1:2,14:16:17.66:457,18,0	1/1:3,17:20:51.15:584,51,0	1/1:0,12:11:33.10:381,33,0
chr10	110359507	.	GA	G	6131.25	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=13.177;DP=542;FS=0.681;HRun=8;HaplotypeScore=54.6663;InbreedingCoeff=0.9936;MQ=69.47;MQ0=0;MQRankSum=-0.155;QD=24.92;ReadPosRankSum=0.505;VQSLOD=5.4158;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:39.06:377,39,0	0/0:6,0:6:15.02:0,15,167	0/0:16,0:16:41.11:0,41,442	0/0:9,0:9:12.62:0,13,195	0/0:23,0:23:57.17:0,57,688	0/0:22,0:22:63.16:0,63,738	0/0:17,0:17:39.11:0,39,460	1/1:4,24:28:72.06:676,72,0	1/1:1,14:15:42.07:406,42,0	0/0:19,0:19:48.13:0,48,562	0/0:26,0:26:66.19:0,66,787	0/0:12,0:12:33.10:0,33,399	0/0:19,0:19:54.17:0,54,652	0/0:19,0:19:51.16:0,51,616	0/0:27,0:27:78.24:0,78,942	0/0:17,0:17:48.14:0,48,569	1/1:2,22:24:57.09:550,57,0	1/1:2,12:14:30.05:290,30,0	1/1:3,25:28:75.10:718,75,0	1/1:4,15:19:45.07:434,45,0	1/1:1,25:26:69.11:666,69,0	0/0:16,0:16:48.11:0,48,563	0/0:15,0:15:42.12:0,42,497	0/0:18,0:18:54.17:0,54,652	0/0:15,0:15:45.14:0,45,544	1/1:3,33:36:99:942,99,0	1/1:2,28:30:78.12:753,78,0	1/1:0,11:11:33.05:319,33,0
chr10	110360210	.	CA	C	5979.62	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-11.569;DP=485;FS=0.726;HRun=2;HaplotypeScore=94.5837;InbreedingCoeff=0.9917;MQ=67.25;MQ0=1;MQRankSum=-2.374;QD=29.17;ReadPosRankSum=1.701;VQSLOD=4.5886;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:33.09:376,33,0	0/0:9,0:9:26.01:0,26,145	0/0:12,0:10:14:0,14,120	0/0:10,0:8:15.28:0,15,114	0/0:27,0:27:66.93:0,67,491	0/0:25,0:25:63.54:0,64,386	0/0:13,0:13:32.10:0,32,230	1/1:4,27:31:81.65:879,82,0	1/1:2,16:18:35.60:495,36,0	0/0:18,0:18:47.60:0,48,358	0/0:24,0:24:64.03:0,64,394	0/0:12,0:12:26.35:0,26,198	0/0:18,0:18:42.26:0,42,269	0/0:21,0:21:60.44:0,60,388	0/0:19,0:19:43.21:0,43,244	0/0:17,0:17:49.45:0,49,318	1/1:0,14:14:42.12:475,42,0	1/1:1,12:13:30.08:338,30,0	1/1:0,22:22:62.54:625,63,0	1/1:1,28:29:80.35:883,80,0	1/1:2,14:16:46.35:501,46,0	0/0:15,0:15:33.46:0,33,200	0/0:15,0:14:32.29:0,32,169	0/0:10,0:10:26.17:0,26,190	0/0:15,0:15:38.58:0,39,219	1/1:1,11:12:16.02:336,16,0	1/1:3,28:31:75.21:841,75,0	1/1:1,6:7:21.06:233,21,0
chr10	110361230	.	GA	G	5815.65	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=7.518;DP=604;FS=12.117;HRun=11;HaplotypeScore=87.5361;InbreedingCoeff=0.9547;MQ=60.72;MQ0=9;MQRankSum=0.337;QD=11.54;ReadPosRankSum=3.178;VQSLOD=3.2100;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,40:48:98.95:832,99,0	0/0:2,0:4:5.85:0,6,46	0/0:10,0:4:11.90:0,12,108	0/0:16,1:8:18.80:0,19,203	1/1:3,0:28:45.06:130,45,0	1/1:1,0:21:36.44:105,36,0	1/1:1,0:14:26.48:76,26,0	1/1:8,28:37:56.26:591,56,0	1/1:3,22:26:55.95:449,56,0	0/0:32,0:32:87.21:0,87,922	0/0:21,0:21:54.14:0,54,575	1/1:1,0:14:24.91:72,25,0	1/1:0,0:19:26.48:77,26,0	1/1:3,0:16:21.25:61,21,0	1/1:4,0:23:32.58:94,33,0	0/0:15,1:16:23.46:0,23,443	1/1:3,14:17:41.93:345,42,0	1/1:9,13:19:30.73:243,31,0	1/1:4,17:21:50.72:405,51,0	1/1:7,31:38:57.84:680,58,0	1/1:1,8:9:23.97:197,24,0	1/1:2,0:18:24.21:69,24,0	1/1:4,0:29:44.80:130,45,0	1/1:3,0:24:28.52:82,29,0	1/1:2,0:18:30.55:88,31,0	1/1:3,17:21:49.95:399,50,0	1/1:8,27:35:74.88:616,75,0	1/1:0,3:3:8.99:74,9,0
chr10	110363143	.	T	TAA	6648.31	PASS	AB=0.613;AC=42;AF=0.750;AN=56;BaseQRankSum=-3.494;DP=480;FS=5.763;HRun=11;HaplotypeScore=60.5135;InbreedingCoeff=0.7704;MQ=55.54;MQ0=4;MQRankSum=0.242;QD=16.79;ReadPosRankSum=1.810;VQSLOD=3.4492;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:25:47.65:660,48,0	0/0:6,0:6:12:0,12,116	0/0:12,0:6:15:0,15,145	0/0:8,0:8:20.91:0,21,184	1/1:4,0:21:4.37:85,4,0	0/1:3,0:13:6.13:46,0,6	0/1:10,0:20:5.66:56,0,6	1/1:5,14:19:42.53:549,43,0	1/1:2,10:13:20.56:269,21,0	0/0:22,0:21:59.68:0,60,558	0/0:15,0:15:39.05:0,39,378	1/1:5,13:17:21.05:289,21,0	1/1:1,5:8:15.05:202,15,0	1/1:4,17:23:29.59:399,30,0	1/1:3,13:19:16.75:191,17,0	0/0:20,0:20:41.99:0,42,407	1/1:5,26:33:58.07:797,58,0	1/1:3,13:18:23.53:290,24,0	1/1:5,10:13:30.09:406,30,0	1/1:5,8:13:16.78:274,17,0	1/1:2,7:8:6.02:87,6,0	1/1:11,2:18:29.88:250,30,0	1/1:3,15:19:9.95:427,10,0	1/1:3,14:20:23.57:313,24,0	1/1:2,0:14:27.45:94,27,0	1/1:4,16:21:12.47:451,12,0	1/1:2,13:16:23.55:294,24,0	1/1:6,9:16:15.05:217,15,0
chr10	110363465	.	TA	T	1861.91	PASS	AB=0.909;AC=9;AF=0.161;AN=56;BaseQRankSum=9.198;DP=499;FS=4.418;HRun=7;HaplotypeScore=48.3696;InbreedingCoeff=0.9031;MQ=64.58;MQ0=0;MQRankSum=0.429;QD=20.24;ReadPosRankSum=0.142;VQSLOD=2.9535;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:66.21:0,66,830	0/1:9,1:10:3.50:3,0,275	0/0:16,0:10:21.94:0,22,282	0/0:17,0:13:33.53:0,34,385	1/1:2,27:29:75.17:765,75,0	1/1:3,17:20:45.10:459,45,0	1/1:0,11:11:30.07:306,30,0	0/0:27,0:27:69.18:0,69,839	0/0:8,0:8:21.07:0,21,264	0/0:21,0:21:54.16:0,54,658	0/0:15,0:15:42.13:0,42,528	0/0:21,0:21:57.17:0,57,704	0/0:13,0:13:36.10:0,36,439	0/0:18,0:18:51.15:0,51,626	0/0:17,0:17:48.15:0,48,604	0/0:13,0:13:33.09:0,33,402	0/0:15,0:12:30.05:0,30,359	0/0:19,1:20:26.58:0,27,649	0/0:21,0:21:57.18:0,57,717	0/0:21,0:21:60.19:0,60,755	0/0:13,0:13:36.12:0,36,453	0/0:12,0:12:36.12:0,36,453	0/0:17,0:17:45.14:0,45,559	0/0:10,0:10:27.09:0,27,339	1/1:0,22:22:48.11:490,48,0	0/0:21,0:21:63.20:0,63,793	0/0:26,0:26:78.25:0,78,981	0/0:18,0:17:51.16:0,51,642
chr10	110363635	.	C	CT	4941.66	PASS	AB=0.860;AC=23;AF=0.411;AN=56;BaseQRankSum=-9.591;DP=507;FS=24.954;HRun=10;HaplotypeScore=54.2352;InbreedingCoeff=0.8330;MQ=68.14;MQ0=0;MQRankSum=0.810;QD=19.53;ReadPosRankSum=-0.113;VQSLOD=3.4721;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,20:24:48.12:511,48,0	0/0:4,0:4:8.98:0,9,74	0/1:9,0:8:0.10:0,0,41	0/1:18,0:15:11.57:12,0,87	0/0:26,0:26:44.91:0,45,369	0/0:15,0:15:38.83:0,39,306	0/0:27,0:27:65.88:0,66,538	1/1:10,17:27:51.09:527,51,0	1/1:4,12:16:38.94:389,39,0	0/0:15,0:15:35.93:0,36,292	0/0:14,0:14:29.93:0,30,246	0/0:21,0:21:38.94:0,39,320	0/0:19,0:21:46.96:0,47,374	0/0:23,0:24:54.88:0,55,441	0/0:22,0:22:58.93:0,59,467	0/0:14,0:15:40.99:0,41,326	1/1:2,17:20:44.95:462,45,0	1/1:2,18:21:44.95:462,45,0	1/1:5,14:18:42.05:422,42,0	1/1:3,17:20:50.82:478,51,0	1/1:4,18:22:42.11:448,42,0	0/0:12,0:12:23.95:0,24,197	0/0:11,0:12:35:0,35,277	0/0:14,0:14:38.94:0,39,320	0/0:11,0:11:23.93:0,24,193	1/1:2,17:18:48.07:486,48,0	1/1:5,21:25:54.13:574,54,0	0/1:3,8:11:3.59:171,0,4
chr10	110364120	.	A	ATTTT	2082.93	PASS	AB=0.867;AC=23;AF=0.460;AN=50;BaseQRankSum=1.647;DP=170;FS=0.000;HRun=1;HaplotypeScore=55.6432;InbreedingCoeff=0.6985;MQ=78.02;MQ0=4;MQRankSum=-1.139;QD=20.03;ReadPosRankSum=1.692;VQSLOD=0.4616;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,6:12:17.77:257,18,0	0/0:2,0:2:6.02:0,6,118	0/0:11,0:7:14.75:0,15,135	0/0:15,0:10:8.97:0,9,159	1/1:2,0:2:2.84:14,3,0	0/0:6,0:6:12.94:0,13,115	0/0:2,0:2:5.36:0,5,22	0/1:22,0:26:29.61:372,0,30	1/1:2,0:4:8.98:85,9,0	0/0:3,0:3:9.02:0,9,145	0/0:8,0:8:21.07:0,21,401	0/0:1,0:1:3.01:0,3,54	0/0:4,0:4:12.02:0,12,174	0/0:5,0:5:15.05:0,15,250	./.	0/0:2,0:2:6.02:0,6,118	1/1:6,0:13:39:388,39,0	1/1:7,0:8:21:203,21,0	1/1:9,0:10:16.93:231,17,0	1/1:6,0:6:11.92:93,12,0	1/1:1,0:2:5.98:52,6,0	./.	./.	0/0:1,0:1:3.01:0,3,54	0/0:6,0:6:11.37:0,11,92	1/1:10,0:10:26.94:295,27,0	1/1:7,0:8:13.40:226,13,0	1/1:3,0:3:5.98:54,6,0
chr10	110364121	.	TA	T	1161.71	PASS	AC=22;AF=0.440;AN=50;BaseQRankSum=1.836;DP=165;FS=1.542;HRun=1;HaplotypeScore=48.3353;InbreedingCoeff=0.7486;MQ=78.53;MQ0=4;MQRankSum=-2.784;QD=11.85;ReadPosRankSum=0.448;VQSLOD=1.9418;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,2:11:9.22:81,9,0	0/0:2,0:2:6.02:0,6,96	0/0:11,0:7:15.02:0,15,167	0/0:15,0:10:17.52:0,18,244	0/0:2,0:2:2.68:0,3,11	0/0:6,0:6:14.76:0,15,142	0/0:2,0:2:6.02:0,6,67	1/1:20,6:26:19.03:307,19,0	1/1:3,0:3:5.98:46,6,0	0/0:3,0:3:9.03:0,9,141	0/0:7,0:7:21.07:0,21,336	0/0:1,0:1:3.01:0,3,48	0/0:4,0:4:12.03:0,12,172	0/0:5,0:5:15.05:0,15,215	./.	0/0:2,0:2:6.02:0,6,96	1/1:7,6:13:38.32:259,38,0	1/1:2,6:8:20.80:148,21,0	1/1:5,5:10:5.60:106,6,0	1/1:0,1:5:11.90:83,12,0	1/1:1,1:2:2.99:23,3,0	./.	./.	0/0:1,0:1:3.01:0,3,48	0/0:6,0:6:12.02:0,12,126	1/1:6,4:10:18.70:140,19,0	1/1:6,2:8:18.90:116,19,0	1/1:0,2:2:5.86:38,6,0
chr10	110364123	.	TG	T	1327.39	PASS	AB=0.900;AC=32;AF=0.640;AN=50;BaseQRankSum=5.021;DP=160;FS=2.800;HRun=1;HaplotypeScore=45.5953;InbreedingCoeff=0.5850;MQ=74.07;MQ0=4;MQRankSum=-1.300;QD=10.97;ReadPosRankSum=2.046;VQSLOD=1.8685;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,2:11:10.54:82,11,0	0/0:2,0:2:6.02:0,6,96	0/0:10,0:6:11.71:0,12,105	0/0:14,0:9:14.12:0,14,147	1/1:1,1:2:2.99:24,3,0	1/1:0,1:5:11.35:67,11,0	1/1:0,0:2:5.49:23,5,0	1/1:20,6:26:26.30:299,26,0	1/1:3,0:3:5.98:46,6,0	0/0:2,0:2:6.02:0,6,96	0/0:7,0:7:21.04:0,21,287	0/0:1,0:1:2.74:0,3,12	0/1:3,1:4:9.18:9,0,26	0/1:5,0:5:4.27:4,0,39	./.	0/0:2,0:2:6.02:0,6,93	1/1:7,6:13:38.32:259,38,0	1/1:2,6:8:20.80:149,21,0	1/1:5,5:10:8.88:127,9,0	1/1:4,1:5:8.93:64,9,0	1/1:1,1:2:2.99:23,3,0	./.	./.	0/0:1,0:1:2.80:0,3,13	1/1:5,0:5:7.04:27,7,0	1/1:6,4:10:18.69:138,19,0	1/1:6,2:8:19.29:117,19,0	1/1:0,2:2:5.86:38,6,0
chr10	110364127	.	TA	T	978.67	PASS	AB=0.950;AC=30;AF=0.577;AN=52;BaseQRankSum=3.450;DP=145;FS=0.803;HRun=1;HaplotypeScore=39.8959;InbreedingCoeff=0.2770;MQ=72.50;MQ0=5;MQRankSum=-0.128;QD=8.90;ReadPosRankSum=3.187;VQSLOD=1.1599;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:4.51:5,0,74	0/0:2,0:2:5.99:0,6,63	0/0:9,0:5:8.96:0,9,95	0/0:13,0:8:10.86:0,11,125	1/1:1,1:2:2.99:24,3,0	1/1:4,0:4:11.83:87,12,0	1/1:2,0:2:5.99:50,6,0	1/1:24,0:23:29.35:184,29,0	1/1:2,0:2:5.98:45,6,0	0/0:2,0:2:6.02:0,6,82	0/0:5,0:5:15.04:0,15,187	0/0:1,0:1:2.94:0,3,18	0/1:4,0:4:8.77:9,0,42	0/1:4,3:7:24.36:24,0,60	1/1:1,0:1:3:27,3,0	0/0:2,0:2:6.01:0,6,70	1/1:14,0:14:8.33:212,8,0	0/1:7,0:7:12.23:102,0,12	0/1:8,0:8:35.79:69,0,36	1/1:3,0:3:2.99:23,3,0	1/1:2,0:2:2.99:23,3,0	./.	./.	0/0:1,0:1:2.96:0,3,19	1/1:0,3:5:11.97:99,12,0	1/1:5,0:5:11.81:86,12,0	0/1:7,0:7:16.17:39,0,16	1/1:2,0:2:5.86:38,6,0
chr10	110369684	.	AT	A	3743.11	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=12.591;DP=396;FS=2.486;HRun=5;HaplotypeScore=36.1081;InbreedingCoeff=0.9204;MQ=65.70;MQ0=1;MQRankSum=-0.059;QD=29.47;ReadPosRankSum=3.205;VQSLOD=3.5333;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.19:0,57,780	0/0:3,0:3:9.03:0,9,123	0/0:6,0:5:7.07:0,7,120	0/0:11,0:8:5.90:0,6,71	1/1:1,21:22:57.16:647,57,0	1/1:1,13:13:39.11:442,39,0	1/1:2,7:9:21.06:238,21,0	0/0:25,0:25:63.21:0,63,860	0/0:14,0:14:39.12:0,39,513	0/0:21,0:21:60.18:0,60,791	0/0:16,0:16:39.13:0,39,534	1/1:0,11:11:27.08:306,27,0	1/1:1,13:14:30.09:340,30,0	1/1:0,8:8:24.07:272,24,0	1/1:0,16:16:45.13:510,45,0	0/0:13,0:13:36.11:0,36,475	0/0:16,0:16:48.16:0,48,654	0/0:23,0:23:66.22:0,66,899	0/0:16,0:16:41.49:0,41,525	0/0:14,0:14:42.13:0,42,557	0/0:10,0:10:27.06:0,27,335	1/1:0,2:2:3.01:34,3,0	1/1:1,5:6:15.04:170,15,0	1/1:0,2:2:6.02:68,6,0	1/1:1,22:23:63.18:715,63,0	0/0:13,0:13:36.12:0,36,493	0/0:34,0:33:99:0,99,1336	0/0:14,0:14:42.14:0,42,575
chr10	110370742	.	CTTA	C	10430.85	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.846;DP=622;FS=1.794;HRun=0;HaplotypeScore=93.8741;InbreedingCoeff=0.9987;MQ=79.93;MQ0=0;MQRankSum=-5.495;QD=41.39;ReadPosRankSum=5.172;VQSLOD=5.7224;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,2941	0/0:9,0:9:27.07:0,27,552	0/0:21,0:21:60.21:0,60,1315	0/0:27,0:26:48.68:0,49,1509	1/1:0,19:19:54.18:920,54,0	1/1:0,24:24:54.18:921,54,0	1/1:4,10:14:24.08:409,24,0	0/0:27,0:27:81.28:0,81,1867	0/0:23,0:23:66.23:0,66,1511	0/0:8,0:8:24.08:0,24,554	0/0:15,0:15:45.14:0,45,993	1/1:0,23:23:57.20:971,57,0	1/1:1,24:25:59.88:1023,60,0	1/1:1,33:34:81.28:1381,81,0	1/1:0,28:27:72.25:1228,72,0	0/0:14,0:14:42.14:0,42,969	0/0:36,0:36:99:0,102,2350	0/0:20,0:20:60.16:0,60,1318	0/0:17,0:17:42.12:0,42,884	0/0:22,0:22:66.23:0,66,1521	0/0:16,0:16:42.14:0,42,937	1/1:0,17:17:38.67:664,39,0	1/1:1,18:19:44.93:767,45,0	1/1:1,24:25:62.89:1074,63,0	1/1:0,24:24:63.22:1074,63,0	0/0:33,0:33:99:0,99,2239	0/0:32,0:32:93.32:0,93,2141	0/0:7,0:7:21.07:0,21,428
chr10	110373319	.	T	TA	7230.85	PASS	AB=0.553;AC=43;AF=0.768;AN=56;BaseQRankSum=0.653;DP=552;FS=0.487;HRun=10;HaplotypeScore=77.9736;InbreedingCoeff=0.8477;MQ=71.54;MQ0=1;MQRankSum=-3.486;QD=15.65;ReadPosRankSum=1.398;VQSLOD=5.3240;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,1:42:85.23:427,85,0	0/0:9,0:9:23.96:0,24,194	0/0:19,0:17:6.21:0,6,164	0/0:16,0:14:22.37:0,22,161	1/1:2,29:31:84.15:881,84,0	1/1:4,27:31:3.27:632,3,0	1/1:4,14:18:27.07:288,27,0	1/1:5,0:23:54.27:284,54,0	1/1:2,0:14:28.41:142,28,0	0/0:23,0:23:56.89:0,57,465	0/0:9,0:9:20.94:0,21,169	1/1:2,14:16:36.09:382,36,0	1/1:3,15:18:21.05:224,21,0	0/1:4,17:21:7.17:342,0,7	1/1:2,13:14:36.09:384,36,0	0/0:14,0:14:35.94:0,36,293	1/1:7,0:30:62.50:313,62,0	1/1:4,0:26:56.88:285,57,0	1/1:12,0:28:54.24:281,54,0	1/1:3,0:16:37.08:190,37,0	1/1:7,0:16:22.63:111,23,0	1/1:1,13:14:8.44:295,8,0	1/1:0,11:12:29.83:287,30,0	1/1:2,12:17:20.17:387,20,0	1/1:0,18:18:45.11:479,45,0	1/1:4,0:27:62.66:320,63,0	1/1:5,0:18:36.83:183,37,0	1/1:0,0:8:22.73:114,23,0
chr10	110373822	.	CAA	C	2375.21	PASS	AB=0.773;AC=27;AF=0.482;AN=56;BaseQRankSum=4.185;DP=524;FS=0.000;HRun=17;HaplotypeScore=74.5846;InbreedingCoeff=0.6397;MQ=73.12;MQ0=3;MQRankSum=2.384;QD=7.42;ReadPosRankSum=6.818;VQSLOD=0.0559;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,18:35:25.33:329,25,0	0/0:9,0:9:18:0,18,188	0/0:22,0:12:14.73:0,15,116	0/1:32,0:19:9.39:9,0,45	1/1:8,6:14:8.25:110,8,0	1/1:11,8:20:20.19:154,20,0	1/1:5,6:15:20.26:180,20,0	0/1:11,10:24:17.76:166,0,18	1/1:11,4:15:17.34:139,17,0	0/0:18,0:20:32.29:0,32,286	0/0:19,0:19:36.02:0,36,375	0/0:15,1:16:14.62:0,15,269	0/0:12,0:12:29.38:0,29,276	0/0:18,0:18:35.96:0,36,352	0/0:14,0:14:36.05:0,36,384	0/0:14,0:14:35.45:0,35,395	0/1:18,4:24:1.33:197,0,1	1/1:10,2:13:25.50:163,25,0	1/1:15,4:21:5.71:132,6,0	1/1:6,10:17:23.61:229,24,0	1/1:1,3:4:8.87:71,9,0	0/0:13,0:17:28.09:0,28,236	0/0:20,0:26:34.17:0,34,288	0/0:14,0:14:32.05:0,32,276	1/1:7,11:22:22.22:203,22,0	1/1:11,16:29:8.59:237,9,0	0/1:16,6:24:31.06:186,0,31	0/1:5,4:10:8:80,0,8
chr10	110374375	.	G	GAA	983.54	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=0.905;DP=515;FS=3.469;HRun=14;HaplotypeScore=74.0142;InbreedingCoeff=0.7741;MQ=67.99;MQ0=8;MQRankSum=0.217;QD=8.13;ReadPosRankSum=-1.903;VQSLOD=0.9673;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:53.57:0,54,445	0/0:7,0:9:15.05:0,15,141	0/0:26,0:9:8.50:0,9,71	0/0:31,0:18:11.77:0,12,101	0/0:25,0:25:62.17:0,62,505	0/0:16,0:19:29.51:0,30,231	0/0:8,0:11:17.62:0,18,136	0/0:25,0:28:43.70:0,44,326	0/0:14,0:16:46.47:0,46,344	0/0:18,0:20:27.21:0,27,241	0/0:20,0:20:40.82:0,41,343	1/1:3,6:14:7.65:109,8,0	1/1:4,12:19:19.88:184,20,0	1/1:4,10:14:6.02:79,6,0	1/1:6,4:12:10.76:95,11,0	0/0:15,0:15:32.69:0,33,257	0/0:21,0:23:54.43:0,54,392	0/0:11,0:12:2.46:0,2,147	0/0:31,0:33:64.09:0,64,551	0/0:19,0:21:44.65:0,45,319	0/0:6,0:7:2.93:0,3,67	1/1:3,8:13:26.64:247,27,0	1/1:6,7:17:28.27:314,28,0	1/1:5,6:12:11.39:115,11,0	0/0:16,0:19:18.18:0,18,313	0/1:19,0:19:27.70:28,0,220	0/0:22,0:25:20.65:0,21,254	0/0:3,0:5:11.21:0,11,60
chr10	110382747	.	T	TTTTCTTTCTTTC	2970.06	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=-6.792;DP=512;FS=1.928;HRun=0;HaplotypeScore=155.6219;InbreedingCoeff=0.8852;MQ=59.22;MQ0=1;MQRankSum=-5.018;QD=48.69;ReadPosRankSum=-1.852;VQSLOD=3.4152;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:75.25:0,75,2355	0/0:7,0:7:15.01:0,15,436	0/0:20,0:12:5.98:0,6,61	0/0:18,0:10:4.57:0,5,58	1/1:2,9:15:21.07:848,21,0	1/1:2,9:17:21.07:1223,21,0	1/1:8,5:14:6.02:349,6,0	0/0:27,0:27:42.12:0,42,1007	0/0:9,0:9:18.05:0,18,547	0/0:20,0:20:33.11:0,33,1059	0/0:17,0:17:39.04:0,39,1024	0/0:14,0:14:36.11:0,36,1065	0/0:11,0:11:30.09:0,30,962	0/0:17,0:17:45.14:0,45,1327	0/0:27,0:27:60.19:0,60,1872	0/0:13,0:13:30.07:0,30,807	0/0:29,0:29:57.15:0,57,1729	0/0:22,0:22:45.04:0,45,1197	0/0:23,0:21:33.10:0,33,910	0/0:11,0:11:30.09:0,30,766	0/0:18,0:18:42.14:0,42,1231	0/0:9,0:9:18.06:0,18,576	0/0:12,0:12:27.08:0,27,748	0/0:25,0:25:60.21:0,60,1951	1/1:1,11:15:12.04:698,12,0	0/0:27,0:27:51.10:0,51,1285	0/0:24,0:24:54.17:0,54,1568	./.
chr10	110385568	.	GACACACACACAC	G	4392.48	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.085;DP=599;FS=6.138;HRun=0;HaplotypeScore=194.6609;InbreedingCoeff=0.8558;MQ=60.27;MQ0=12;MQRankSum=-9.314;QD=32.54;ReadPosRankSum=1.573;VQSLOD=3.5704;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:37:75.26:0,75,3377	0/0:7,0:7:12.04:0,12,578	0/0:26,0:10:3.01:0,3,48	0/0:28,0:13:6.91:0,7,229	0/0:9,0:17:8.06:0,8,91	0/0:21,0:21:12.04:0,12,345	0/0:30,0:31:20.97:0,21,754	0/0:22,0:24:35.15:0,35,1309	0/0:15,0:19:45.15:0,45,1649	0/0:10,0:10:21.07:0,21,1057	0/0:14,0:16:30.10:0,30,1389	1/1:10,6:18:21.07:690,21,0	1/1:6,10:17:33.11:1108,33,0	1/1:8,11:21:27.09:899,27,0	1/1:11,10:22:21.07:711,21,0	0/0:19,0:19:36.12:0,36,1678	0/0:25,0:33:60.20:0,60,2424	0/0:17,0:22:54.19:0,54,2629	0/0:18,0:18:36.12:0,36,1423	0/0:12,0:13:30.10:0,30,1480	0/0:48,0:55:90.31:0,90,4049	1/1:16,3:19:3.01:104,3,0	1/1:7,6:13:3.01:104,3,0	1/1:16,7:24:27.09:777,27,0	0/0:12,0:23:12.04:0,12,282	0/0:18,0:18:30.10:0,30,1231	0/0:10,0:14:30.10:0,30,1349	0/0:8,0:10:24.08:0,24,1100
chr10	110385787	.	AT	A	7709.71	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.140;DP=743;FS=5.534;HRun=2;HaplotypeScore=72.4469;InbreedingCoeff=0.9990;MQ=83.48;MQ0=0;MQRankSum=-0.959;QD=36.03;ReadPosRankSum=1.860;VQSLOD=5.4954;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,1859	0/0:7,0:7:21.07:0,21,315	0/0:17,0:17:27.12:0,27,521	0/0:26,0:26:40.31:0,40,839	0/0:17,0:17:51.16:0,51,745	0/0:27,0:27:78.26:0,78,1158	0/0:31,0:31:90.29:0,90,1328	0/0:30,0:30:81.27:0,81,1211	0/0:38,0:38:99:0,114,1705	0/0:26,0:26:78.24:0,78,1130	0/0:22,0:22:57.17:0,57,816	1/1:0,30:30:75.24:973,75,0	1/1:0,37:37:99:1363,105,0	1/1:0,35:35:99:1285,99,0	1/1:0,36:36:99:1285,99,0	0/0:24,0:24:72.24:0,72,1079	0/0:42,0:42:99:0,123,1791	0/0:25,0:25:75.25:0,75,1121	0/0:19,0:19:57.17:0,57,827	0/0:17,0:17:51.17:0,51,763	0/0:49,0:49:99:0,144,2134	1/1:0,26:26:78.25:1013,78,0	1/1:0,24:24:69.22:896,69,0	1/1:0,26:26:69.22:896,69,0	0/0:18,0:18:54.17:0,54,791	0/0:19,0:19:57.19:0,57,855	0/0:22,0:22:66.22:0,66,986	0/0:11,0:11:33.11:0,33,495
chr10	110387202	.	GT	G	6307.93	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=6.151;DP=627;FS=0.449;HRun=12;HaplotypeScore=99.2265;InbreedingCoeff=0.8761;MQ=72.90;MQ0=0;MQRankSum=1.533;QD=12.32;ReadPosRankSum=1.860;VQSLOD=4.7940;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,35:44:51.31:562,51,0	0/0:13,0:13:27.01:0,27,264	0/0:23,0:21:1.64:0,2,151	0/0:16,0:13:12.67:0,13,112	1/1:4,15:21:45.90:337,46,0	1/1:5,19:25:26.31:367,26,0	1/1:8,19:27:0.25:318,0,0	1/1:4,26:30:17.75:457,18,0	1/1:7,14:22:7.41:231,7,0	0/0:16,0:16:14.77:0,15,306	0/0:28,0:28:63.11:0,63,628	1/1:0,1:15:29.47:100,29,0	1/1:2,0:18:25.68:74,26,0	1/1:4,0:23:36.66:106,37,0	1/1:4,0:20:26.47:77,26,0	0/0:19,0:19:33.07:0,33,335	1/1:4,28:33:34.45:518,34,0	1/1:1,21:22:53.79:418,54,0	1/1:6,8:16:27.95:197,28,0	1/1:4,17:22:31.86:369,32,0	1/1:4,16:20:28.13:328,28,0	1/1:4,0:25:35.24:107,35,0	1/1:3,0:21:36.66:106,37,0	1/1:3,0:13:19.27:68,19,0	1/1:3,13:16:35.85:279,36,0	1/1:7,27:34:53.10:579,53,0	1/1:6,22:29:21.17:364,21,0	1/1:1,15:16:44.83:348,45,0
chr10	110387876	.	G	GA	2662.65	PASS	AB=0.862;AC=40;AF=0.741;AN=54;BaseQRankSum=0.470;DP=565;FS=0.477;HRun=15;HaplotypeScore=61.4173;InbreedingCoeff=0.0914;MQ=58.26;MQ0=8;MQRankSum=-0.006;QD=5.24;ReadPosRankSum=-1.405;VQSLOD=1.7267;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,23:35:38.09:297,38,0	0/1:9,1:10:10.54:11,0,56	./.	0/1:16,0:8:6.05:18,0,6	0/1:26,4:30:40.56:41,0,219	0/1:16,1:17:7.59:8,0,130	0/0:20,0:24:10.11:0,10,163	1/1:19,4:26:18.93:153,19,0	1/1:2,12:15:8.95:69,9,0	0/1:16,2:20:10.56:11,0,138	0/1:16,1:18:18.68:19,0,97	1/1:10,6:16:5.87:182,6,0	1/1:11,1:12:14.67:97,15,0	1/1:2,13:15:5.99:50,6,0	1/1:7,13:21:5.84:148,6,0	0/0:10,0:10:14.59:0,15,90	0/1:12,19:31:15.22:83,0,15	1/1:8,18:27:23.66:180,24,0	1/1:16,6:19:20.55:203,21,0	1/1:3,14:17:28.31:202,28,0	0/1:7,0:8:1.33:77,0,1	1/1:6,10:16:19.60:143,20,0	1/1:8,10:19:21.25:270,21,0	0/1:9,13:22:4.35:66,0,4	0/1:18,1:21:5.71:6,0,183	1/1:14,3:24:8.29:133,8,0	1/1:7,27:34:27.29:237,27,0	1/1:7,6:13:13.80:120,14,0
chr10	110388596	.	A	ATTTT	6227.10	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=-0.698;DP=514;FS=5.650;HRun=14;HaplotypeScore=105.5833;InbreedingCoeff=0.4925;MQ=65.99;MQ0=0;MQRankSum=-2.272;QD=13.08;ReadPosRankSum=-4.311;VQSLOD=1.1040;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:14,10:26:16.39:236,16,0	0/1:10,0:10:9.54:10,0,131	0/0:10,0:9:13.38:0,13,99	0/0:9,0:9:6.98:0,7,73	1/1:14,13:35:67.85:994,68,0	1/1:13,6:21:10.85:168,11,0	1/1:14,9:24:27.31:418,27,0	1/1:10,5:14:25.84:402,26,0	1/1:20,0:20:34.86:512,35,0	0/0:15,0:15:17.47:0,17,208	0/1:17,0:17:11.59:12,0,322	1/1:6,0:16:6.91:48,7,0	1/1:8,0:15:11.91:110,12,0	0/1:21,0:21:2.26:408,0,2	1/1:5,0:19:10.97:84,11,0	0/1:14,0:15:3.14:3,0,185	1/1:8,10:21:14.26:215,14,0	1/1:6,0:15:4.74:22,5,0	1/1:11,1:19:22.50:329,23,0	1/1:13,0:29:57.90:747,58,0	1/1:10,0:10:20.71:284,21,0	1/1:6,0:14:19.96:151,20,0	1/1:8,0:24:17.71:127,18,0	1/1:3,0:22:15.47:113,15,0	1/1:6,6:13:3.01:40,3,0	1/1:23,0:23:25.55:281,26,0	1/1:10,0:16:15.65:168,16,0	1/1:1,11:14:20.99:346,21,0
chr10	110389122	.	GA	G	328.02	PASS	AB=0.750;AC=13;AF=0.241;AN=54;BaseQRankSum=1.282;DP=419;FS=6.072;HRun=13;HaplotypeScore=86.2125;InbreedingCoeff=0.5503;MQ=44.73;MQ0=8;MQRankSum=-2.507;QD=3.42;ReadPosRankSum=3.099;VQSLOD=0.6224;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:60.86:0,61,508	0/0:2,0:2:6.01:0,6,58	0/0:5,1:1:3:0,3,26	./.	0/0:20,0:19:16.03:0,16,147	0/0:14,0:14:18.02:0,18,170	0/0:15,0:14:11.95:0,12,97	0/1:10,2:13:16.68:17,0,158	0/0:15,1:16:5.16:0,5,200	0/0:16,0:16:20.80:0,21,161	0/0:12,0:12:14.97:0,15,132	1/1:10,6:16:17.66:128,18,0	0/1:8,3:12:26.40:26,0,45	1/1:7,2:9:4.45:41,4,0	0/1:2,4:7:9.28:51,0,9	0/0:10,0:10:13.57:0,14,121	0/0:27,0:26:39.40:0,39,341	0/0:19,1:20:28.65:0,29,237	0/0:16,0:15:26.82:0,27,231	0/0:15,0:15:12.24:0,12,193	0/0:20,0:21:26.85:0,27,237	1/1:9,5:13:8.81:65,9,0	1/1:6,5:9:11.80:84,12,0	1/1:13,1:14:8.21:82,8,0	0/0:12,0:13:26.82:0,27,234	0/0:14,1:15:15.17:0,15,146	0/0:17,1:20:11.01:0,11,145	0/0:18,0:17:29.70:0,30,244
chr10	110391036	.	CG	C	5374.70	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.907;DP=599;FS=5.325;HRun=4;HaplotypeScore=64.3987;InbreedingCoeff=0.9893;MQ=75.32;MQ0=0;MQRankSum=-1.855;QD=32.57;ReadPosRankSum=2.124;VQSLOD=5.5994;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.28:0,87,1189	0/0:10,0:10:30.09:0,30,402	0/0:16,0:15:35.48:0,35,452	0/0:7,0:7:18.53:0,19,235	0/0:12,0:12:33.07:0,33,439	0/0:13,0:13:36.12:0,36,504	0/0:38,0:38:99:0,111,1534	0/0:20,0:20:57.18:0,57,778	0/0:20,0:20:57.13:0,57,757	0/0:19,0:19:54.16:0,54,724	0/0:11,0:11:27.09:0,27,376	1/1:2,31:33:87.21:1027,87,0	1/1:0,14:14:36.10:432,36,0	1/1:1,41:42:99:1475,123,0	1/1:0,12:12:30.09:360,30,0	0/0:19,0:19:51.17:0,51,708	0/0:38,0:38:99:0,114,1594	0/0:34,0:33:90.30:0,90,1257	0/0:19,0:19:48.09:0,48,629	0/0:5,0:5:15.05:0,15,207	0/0:68,0:68:99:0,199,2662	1/1:0,12:12:30.09:358,30,0	1/1:2,7:9:24.07:284,24,0	1/1:3,40:43:99:1439,120,0	0/0:17,0:17:48.11:0,48,672	0/0:16,0:16:45.12:0,45,581	0/0:17,0:17:48.13:0,48,626	0/0:4,0:4:12.04:0,12,168
chr10	110392057	.	CCACACA	C	2217.76	PASS	AB=0.818;AC=27;AF=0.540;AN=50;BaseQRankSum=3.944;DP=792;FS=9.982;HRun=0;HaplotypeScore=173.6839;InbreedingCoeff=0.0894;MQ=58.16;MQ0=20;MQRankSum=-2.409;QD=4.16;ReadPosRankSum=-0.546;VQSLOD=2.0957;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,1:40:8.37:78,8,0	0/0:6,0:9:9.49:0,9,161	./.	./.	0/1:16,5:21:0.11:0,0,0	1/1:15,5:20:6.02:121,6,0	0/1:20,10:30:5.82:72,0,6	./.	1/1:19,6:27:33.11:623,33,0	0/0:31,0:32:18.05:0,18,443	0/0:11,0:13:9.03:0,9,214	0/1:16,1:30:32.17:57,0,32	0/1:14,1:18:23.87:91,0,24	0/1:21,0:28:31.06:56,0,31	1/1:30,0:37:16.38:171,16,0	0/0:30,0:38:33.56:0,34,718	0/1:14,11:26:9.24:208,0,9	1/1:13,7:20:1.68:58,2,0	0/0:15,0:15:8.59:0,9,46	0/1:19,1:21:7.07:189,0,7	0/1:65,0:65:10.19:29,0,10	0/1:16,1:24:16.25:57,0,16	0/0:11,0:11:2.99:0,3,24	0/1:29,0:38:33.34:36,0,33	1/1:18,2:24:4.59:135,5,0	1/1:19,5:24:11.37:126,11,0	1/1:15,6:22:14.89:264,15,0	0/1:10,0:10:5.90:6,0,14
chr10	110392516	.	T	TC	2330.74	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=16.356;DP=698;FS=3.286;HRun=0;HaplotypeScore=110.4296;InbreedingCoeff=0.9964;MQ=88.56;MQ0=0;MQRankSum=-3.099;QD=15.44;ReadPosRankSum=4.076;VQSLOD=5.8757;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1325	0/0:14,0:14:42.13:0,42,570	0/0:22,0:22:59.98:0,60,794	0/0:32,0:32:90.20:0,90,1201	0/0:21,0:21:63.19:0,63,848	0/0:20,0:20:60.18:0,60,821	0/0:20,0:20:60.19:0,60,824	0/0:35,0:35:99:0,102,1383	0/0:29,0:29:84.25:0,84,1139	0/0:36,0:36:96.32:0,96,1331	0/0:21,0:21:60.20:0,60,836	1/1:4,16:20:40.79:369,41,0	1/1:4,16:20:41.98:352,42,0	1/1:5,15:21:51.90:393,52,0	1/1:2,15:21:44.22:300,44,0	0/0:34,0:34:99:0,99,1361	0/0:29,0:29:87.25:0,87,1178	0/0:14,0:14:39.13:0,39,545	0/0:20,0:20:60.18:0,60,809	0/0:29,0:29:87.27:0,87,1183	0/0:36,0:36:99:0,108,1460	1/1:8,7:15:14.92:192,15,0	1/1:4,16:20:22.26:286,22,0	1/1:4,30:34:52.70:638,53,0	0/0:22,0:22:66.21:0,66,901	0/0:28,0:28:84.28:0,84,1168	0/0:35,0:35:99:0,102,1421	0/0:15,0:15:45.15:0,45,629
chr10	110392517	.	G	GT	2271.17	PASS	AB=0.652;AC=13;AF=0.232;AN=56;BaseQRankSum=16.777;DP=700;FS=2.165;HRun=1;HaplotypeScore=112.8226;InbreedingCoeff=0.8901;MQ=88.86;MQ0=0;MQRankSum=-4.178;QD=14.94;ReadPosRankSum=4.391;VQSLOD=3.7297;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1357	0/0:14,0:14:42.13:0,42,571	0/0:22,0:22:63.19:0,63,841	0/0:33,0:33:90.16:0,90,1215	0/0:20,0:20:60.19:0,60,822	0/0:20,0:20:60.19:0,60,823	0/0:21,0:21:57.78:0,58,818	0/0:35,0:35:99:0,99,1375	0/0:30,0:30:87.23:0,87,1164	0/0:36,0:36:99:0,99,1364	0/0:21,0:21:60.20:0,60,838	1/1:3,16:21:29.63:344,30,0	1/1:3,16:19:22.82:315,23,0	1/1:6,15:21:53.41:403,53,0	1/1:6,14:20:47.24:323,47,0	0/0:34,0:34:99:0,99,1366	0/0:29,0:29:87.25:0,87,1178	0/0:13,0:13:39.13:0,39,545	0/0:20,0:20:60.19:0,60,822	0/0:29,0:29:87.26:0,87,1178	0/0:36,0:36:99:0,108,1474	0/1:7,8:15:5.54:180,0,6	1/1:6,16:22:4.10:291,4,0	1/1:4,30:34:16.24:599,16,0	0/0:22,0:22:66.22:0,66,914	0/0:28,0:28:84.28:0,84,1170	0/0:35,0:35:99:0,102,1423	0/0:15,0:15:45.15:0,45,629
chr10	110396792	.	GCAGAGAGAGACACACA	G	7441.08	PASS	AC=28;AF=0.519;AN=54;BaseQRankSum=6.565;DP=648;FS=6.611;HRun=0;HaplotypeScore=245.6042;InbreedingCoeff=0.9313;MQ=61.20;MQ0=6;MQRankSum=-5.354;QD=22.69;ReadPosRankSum=-3.100;VQSLOD=2.3444;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:42,5:47:54.25:859,54,0	0/0:6,0:6:15.02:0,15,753	0/0:37,0:22:36.40:0,36,654	0/0:40,0:26:47.98:0,48,1096	1/1:7,13:20:1.84:11,2,0	1/1:8,20:27:24.08:1092,24,0	1/1:21,0:21:23.81:228,24,0	1/1:21,0:21:47.59:378,48,0	1/1:2,21:21:18:812,18,0	0/0:21,0:21:54.16:0,54,2724	0/0:14,0:14:39.09:0,39,2050	0/0:22,0:22:60.10:0,60,2696	0/0:16,0:16:41.97:0,42,1888	0/0:23,0:23:54.13:0,54,2979	0/0:21,0:21:51.15:0,51,3218	0/0:19,0:19:45.10:0,45,2427	1/1:28,0:28:39.82:381,40,0	1/1:12,1:13:15.56:257,16,0	1/1:4,16:19:47.48:614,47,0	1/1:3,16:19:17.78:577,18,0	./.	0/0:11,0:11:33.04:0,33,1284	0/0:22,0:22:54.03:0,54,2245	0/0:41,0:41:99:0,114,5922	1/1:4,16:20:12.04:547,12,0	1/1:7,20:27:50.31:1000,50,0	1/1:4,24:28:12.19:547,12,0	1/1:1,12:13:3.01:137,3,0
chr10	110400150	.	T	TA	1757.18	PASS	AB=0.776;AC=32;AF=0.571;AN=56;BaseQRankSum=-2.267;DP=425;FS=0.620;HRun=15;HaplotypeScore=60.8531;InbreedingCoeff=0.4628;MQ=67.64;MQ0=2;MQRankSum=-2.182;QD=5.36;ReadPosRankSum=-4.349;VQSLOD=0.9940;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,25:39:30.74:242,31,0	0/0:3,0:3:2.88:0,3,18	1/1:15,0:7:1.49:9,1,0	0/1:15,0:8:0.16:0,0,0	0/1:8,13:23:19.53:128,0,20	1/1:11,3:13:19.85:144,20,0	1/1:2,3:6:14.67:104,15,0	1/1:18,4:23:25.72:181,26,0	1/1:6,8:15:11.90:72,12,0	0/0:16,0:16:8.52:0,9,53	0/1:10,6:16:8.76:9,0,64	0/0:6,0:10:7.84:0,8,41	0/0:8,0:14:10.91:0,11,41	0/0:0,0:8:8.15:0,8,23	0/0:3,0:11:6.06:0,6,18	0/1:11,6:17:2.03:2,0,72	1/1:8,15:24:2.97:121,3,0	1/1:9,7:16:12.89:96,13,0	1/1:14,2:17:8.54:129,9,0	1/1:13,0:13:11.76:183,12,0	1/1:6,12:20:19.48:134,19,0	0/0:8,0:14:6.07:0,6,49	0/0:3,0:5:4.95:0,5,24	0/0:3,0:16:16.03:0,16,47	0/1:5,12:17:21.04:61,0,21	1/1:11,1:13:19.62:138,20,0	1/1:6,12:20:9.46:159,9,0	0/1:4,0:4:9.19:28,0,9
chr10	110401151	.	TG	T	1222.27	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.958;DP=574;FS=1.013;HRun=3;HaplotypeScore=81.5980;InbreedingCoeff=0.9896;MQ=74.83;MQ0=8;MQRankSum=-6.960;QD=14.55;ReadPosRankSum=0.815;VQSLOD=2.9513;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.21:0,66,929	0/0:9,0:9:27.07:0,27,369	0/0:67,0:34:35.25:0,35,516	0/0:72,1:32:35.28:0,35,352	0/0:22,0:22:66.20:0,66,913	0/0:5,0:5:15.03:0,15,181	0/0:10,0:10:27.08:0,27,371	0/0:14,0:14:42.08:0,42,531	0/0:12,0:12:36:0,36,448	0/0:22,0:22:66.22:0,66,934	0/0:22,0:22:57.03:0,57,726	1/1:10,2:11:20.03:134,20,0	1/1:5,5:9:25.30:197,25,0	1/1:6,4:9:16.54:165,17,0	1/1:7,5:12:31.32:261,31,0	0/0:11,0:11:30.09:0,30,414	0/0:30,0:30:87.24:0,87,1192	0/0:29,0:29:78.26:0,78,1120	0/0:24,0:23:63.16:0,63,832	0/0:21,0:21:63.17:0,63,848	0/0:13,0:13:36.09:0,36,478	1/1:11,1:12:33.12:188,33,0	1/1:11,5:16:33.50:229,33,0	1/1:2,10:12:21.80:246,22,0	0/0:22,0:22:63.19:0,63,885	0/0:32,0:32:96.28:0,96,1301	0/0:15,0:15:45.14:0,45,627	0/0:5,0:5:15.05:0,15,215
chr10	110401157	.	T	TTTTTG	4139.01	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.582;DP=587;FS=5.377;HRun=0;HaplotypeScore=112.5040;InbreedingCoeff=0.9535;MQ=72.86;MQ0=7;MQRankSum=-8.481;QD=43.11;ReadPosRankSum=0.797;VQSLOD=3.5125;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.21:0,69,1291	0/0:9,0:9:24.08:0,24,435	0/0:60,0:33:2.40:0,2,435	0/0:85,0:32:15.81:0,16,341	0/0:22,0:22:63.21:0,63,1147	0/0:5,0:5:14.80:0,15,215	0/0:9,0:9:24.08:0,24,384	0/0:17,0:17:42.10:0,42,610	0/0:10,0:10:27.09:0,27,446	0/0:23,0:23:63.21:0,63,1146	0/0:19,0:19:51.15:0,51,870	1/1:3,10:13:20.90:492,21,0	1/1:5,6:11:26.37:610,26,0	1/1:4,7:10:17.55:387,18,0	1/1:6,7:16:29.06:568,29,0	0/0:10,0:10:26.86:0,27,483	0/0:32,0:32:87.28:0,87,1576	0/0:29,0:29:84.27:0,84,1567	0/0:20,0:19:51.17:0,51,856	0/0:21,0:21:63.13:0,63,1072	0/0:13,0:13:30.10:0,30,555	1/1:3,8:11:27.06:796,27,0	1/1:6,9:16:38.13:918,38,0	1/1:15,1:16:31.97:367,32,0	0/0:23,0:23:63.17:0,63,1100	0/0:35,0:35:90.29:0,90,1617	0/0:15,0:15:42.14:0,42,797	0/0:6,0:6:15.05:0,15,253
chr10	110402740	.	T	TA	8974.99	PASS	AB=0.574;AC=29;AF=0.518;AN=56;BaseQRankSum=-13.873;DP=696;FS=2.659;HRun=10;HaplotypeScore=71.1769;InbreedingCoeff=0.9231;MQ=75.55;MQ0=2;MQRankSum=-2.096;QD=21.89;ReadPosRankSum=3.474;VQSLOD=5.8560;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,43:50:52.98:971,53,0	0/0:7,0:6:14.98:0,15,123	0/0:34,1:29:30.24:0,30,357	0/0:24,0:20:6.40:0,6,197	1/1:6,21:27:38.34:554,38,0	1/1:4,21:25:57.14:607,57,0	1/1:1,22:23:66.17:704,66,0	1/1:7,15:22:13.74:436,14,0	1/1:5,26:31:41.52:647,42,0	0/0:22,0:22:55.92:0,56,466	0/0:25,0:25:63.78:0,64,516	0/0:22,0:22:62.89:0,63,511	0/0:19,0:19:47.88:0,48,387	0/0:16,0:16:38.92:0,39,316	0/0:19,0:20:49.91:0,50,392	0/0:27,0:26:65.89:0,66,539	1/1:2,22:24:51.13:543,51,0	1/1:4,31:35:50.55:743,51,0	1/1:6,15:21:20.49:403,20,0	1/1:7,27:34:81.63:850,82,0	1/1:0,10:11:23.89:238,24,0	0/0:18,0:18:38.29:0,38,298	0/0:19,0:20:52.94:0,53,420	0/0:28,0:28:80.82:0,81,650	1/1:3,19:22:20.86:423,21,0	0/1:7,20:27:4.26:570,0,4	1/1:8,34:42:71.60:958,72,0	1/1:3,13:16:11.45:327,11,0
chr10	110403209	.	T	TTTTTTTTC	14466.13	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-2.540;DP=576;FS=13.154;HRun=0;HaplotypeScore=117.4969;InbreedingCoeff=0.8824;MQ=61.00;MQ0=4;MQRankSum=-7.402;QD=31.04;ReadPosRankSum=-0.877;VQSLOD=3.4616;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:22:30.08:834,30,0	0/0:8,0:8:17.87:0,18,239	0/0:21,0:14:14.02:0,14,233	0/0:15,0:10:5.39:0,5,107	1/1:30,0:30:18.40:628,18,0	1/1:18,0:18:33.09:928,33,0	1/1:24,1:22:24.07:750,24,0	1/1:29,0:27:41.87:552,42,0	1/1:14,0:14:9.01:258,9,0	0/0:25,0:25:52.32:0,52,998	0/0:28,0:28:68.71:0,69,1425	1/1:10,14:24:9.73:434,10,0	1/1:10,9:20:8.17:540,8,0	1/1:11,11:23:24.06:789,24,0	1/1:11,10:22:21.05:744,21,0	0/0:13,0:13:24.08:0,24,589	1/1:23,0:23:26.71:687,27,0	1/1:11,0:10:5.98:172,6,0	1/1:20,0:20:46.99:875,47,0	1/1:25,0:25:35.92:782,36,0	1/1:11,0:11:8.87:129,9,0	1/1:9,11:20:27.08:952,27,0	1/1:13,15:30:34.74:1168,35,0	1/1:7,8:15:9.02:324,9,0	1/1:27,0:27:32.26:717,32,0	1/1:24,1:25:51.21:1046,51,0	1/1:22,0:22:30.10:822,30,0	1/1:6,0:6:12.02:334,12,0
chr10	110403218	.	T	TTTTTTTC	16177.64	PASS	AB=0.970;AC=38;AF=0.679;AN=56;BaseQRankSum=-5.502;DP=608;FS=5.825;HRun=0;HaplotypeScore=99.9720;InbreedingCoeff=0.4468;MQ=52.90;MQ0=11;MQRankSum=-6.049;QD=31.60;ReadPosRankSum=2.360;VQSLOD=4.3017;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,17:25:19.76:763,20,0	0/0:7,0:7:17.90:0,18,235	0/0:18,0:11:14.03:0,14,224	0/0:12,0:7:6.94:0,7,105	1/1:6,25:33:8.90:725,9,0	1/1:4,14:20:33.09:1153,33,0	1/1:8,17:25:27.04:852,27,0	1/1:5,21:24:56.34:1174,56,0	1/1:1,13:17:9.48:325,9,0	0/0:23,0:22:52.29:0,52,940	0/0:25,0:25:69.21:0,69,1376	0/1:26,0:25:92.68:229,0,93	0/1:20,0:19:87.69:244,0,88	0/1:24,1:25:99:441,0,172	0/1:22,0:22:33.21:500,0,33	0/0:11,0:11:24.08:0,24,561	1/1:7,17:25:35.69:976,36,0	1/1:5,9:14:15:419,15,0	1/1:6,20:27:61.21:1518,61,0	1/1:6,21:28:34.70:811,35,0	1/1:4,7:10:7.19:115,7,0	0/1:23,1:24:54.17:618,0,54	0/1:24,3:27:20.08:847,0,20	1/1:11,1:10:9.02:288,9,0	1/1:9,21:34:16.32:821,16,0	1/1:9,22:31:66.33:2019,66,0	1/1:3,20:24:27.07:958,27,0	1/1:2,3:5:12.02:384,12,0
chr10	110403219	.	T	TTTTTTC	12693.16	PASS	AB=0.984;AC=35;AF=0.625;AN=56;BaseQRankSum=2.111;DP=600;FS=9.167;HRun=0;HaplotypeScore=103.8298;InbreedingCoeff=0.2812;MQ=51.65;MQ0=11;MQRankSum=-6.573;QD=25.13;ReadPosRankSum=4.193;VQSLOD=3.5749;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,2:25:7.90:637,0,8	0/0:7,0:7:17.92:0,18,224	0/0:18,0:11:14.03:0,14,211	0/0:11,0:6:6.60:0,7,102	1/1:34,0:34:13.26:559,13,0	1/1:19,1:20:33.09:872,33,0	1/1:27,1:25:18.02:636,18,0	1/1:24,1:23:50.83:926,51,0	1/1:17,0:17:9.48:233,9,0	0/0:23,0:22:52.36:0,52,893	0/0:25,0:25:69.21:0,69,1293	0/1:26,1:26:99:221,0,148	0/1:20,0:19:99:201,0,139	0/1:24,0:24:99:332,0,268	0/1:21,1:22:60.45:451,0,60	0/0:11,0:11:24.08:0,24,516	1/1:22,2:24:19.28:727,19,0	0/1:15,0:13:10.91:312,0,11	1/1:26,1:27:22.21:1051,22,0	1/1:27,0:27:35.85:723,36,0	1/1:10,0:9:7.19:115,7,0	0/1:22,0:22:99:493,0,126	0/1:27,0:27:57.76:650,0,58	1/1:12,0:10:9.02:229,9,0	1/1:31,2:33:14.24:719,14,0	1/1:31,1:31:46.93:1577,47,0	0/1:25,0:24:7.73:682,0,8	1/1:4,1:5:12.02:346,12,0
chr10	110403666	.	G	GT	8278.20	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-13.007;DP=719;FS=1.808;HRun=0;HaplotypeScore=69.3234;InbreedingCoeff=0.9999;MQ=89.76;MQ0=0;MQRankSum=-1.988;QD=43.80;ReadPosRankSum=3.413;VQSLOD=5.4381;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1552	0/0:13,0:13:36.12:0,36,500	0/0:29,0:29:84.25:0,84,1147	0/0:26,0:26:78.16:0,78,1015	0/0:14,0:14:42.14:0,42,585	0/0:22,0:22:66.20:0,66,905	0/0:42,0:42:99:0,123,1665	0/0:23,0:23:59.99:0,60,795	0/0:15,0:15:42.14:0,42,587	0/0:33,0:33:96.31:0,96,1326	0/0:13,0:13:39.13:0,39,543	1/1:2,22:25:69.23:1091,69,0	1/1:0,27:27:78.27:1247,78,0	1/1:0,24:24:63.21:1007,63,0	1/1:0,25:25:75.26:1199,75,0	0/0:20,0:20:60.20:0,60,839	0/0:33,0:33:99:0,99,1384	0/0:27,0:27:81.27:0,81,1132	0/0:22,0:22:63.17:0,63,845	0/0:20,0:20:57.19:0,57,786	0/0:51,0:51:99:0,150,2056	1/1:1,31:32:84.29:1338,84,0	1/1:0,16:16:42.14:670,42,0	1/1:0,40:40:99:1727,108,0	0/0:26,0:26:69.22:0,69,947	0/0:28,0:28:84.28:0,84,1174	0/0:24,0:23:72.24:0,72,1006	0/0:11,0:11:33.04:0,33,437
chr10	110404903	.	GC	G	1704.96	PASS	AB=0.956;AC=25;AF=0.446;AN=56;BaseQRankSum=2.406;DP=418;FS=18.400;HRun=12;HaplotypeScore=53.2759;InbreedingCoeff=0.5984;MQ=73.38;MQ0=0;MQRankSum=-0.150;QD=7.02;ReadPosRankSum=2.259;VQSLOD=0.6141;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,15:36:41.64:296,42,0	0/1:8,1:9:8.21:8,0,107	0/0:11,1:11:11.69:0,12,99	0/0:15,0:10:14.15:0,14,117	0/0:8,0:12:8.77:0,9,68	0/0:8,0:10:5.85:0,6,45	0/0:20,0:23:37.54:0,38,268	1/1:4,8:14:24.95:171,25,0	1/1:5,10:16:28.86:215,29,0	0/1:10,0:10:12.02:12,0,52	0/1:11,0:11:11.45:11,0,52	0/0:11,0:11:24:0,24,227	0/0:19,1:21:16.25:0,16,182	0/1:13,1:14:5.70:6,0,116	0/0:16,1:17:12.78:0,13,278	0/0:15,1:16:12.82:0,13,298	1/1:8,12:21:34.87:259,35,0	1/1:4,9:15:26.31:178,26,0	1/1:13,2:15:20.40:152,20,0	0/0:4,4:8:0:0,0,0	1/1:11,12:23:29.83:232,30,0	0/0:8,0:8:6:0,6,54	0/0:8,0:8:5.04:0,5,37	0/1:16,1:17:1.64:2,0,258	0/0:10,0:13:15.73:0,16,127	1/1:11,5:17:10.74:75,11,0	1/1:10,6:16:23.76:166,24,0	1/1:1,7:9:16.98:122,17,0
chr10	110408611	.	GGCACACACCCAGA	G	2579.36	PASS	AB=0.804;AC=12;AF=0.222;AN=54;BaseQRankSum=-0.510;DP=644;FS=3.816;HRun=0;HaplotypeScore=187.1801;InbreedingCoeff=0.7448;MQ=52.71;MQ0=60;MQRankSum=0.190;QD=20.80;ReadPosRankSum=-0.029;VQSLOD=2.5769;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:20:41.71:0,42,558	0/0:15,0:15:32.80:0,33,473	0/0:34,0:3:2.98:0,3,21	./.	0/0:12,0:12:32.85:0,33,365	0/0:20,0:19:39.01:0,39,482	0/0:21,0:21:42.12:0,42,632	0/0:20,0:13:26.95:0,27,224	0/0:29,0:28:78.13:0,78,1223	0/0:25,0:25:69.12:0,69,1076	0/0:14,0:12:25.29:0,25,357	1/1:21,0:20:38.28:482,38,0	1/1:9,0:7:12.04:175,12,0	1/1:19,0:16:36.07:619,36,0	1/1:20,0:20:32.95:499,33,0	0/0:12,0:12:30.08:0,30,523	0/0:18,0:17:11.66:0,12,493	0/0:36,0:34:87.24:0,87,1552	0/0:14,0:10:18.03:0,18,295	0/0:18,0:17:14.24:0,14,429	0/0:85,0:82:99:0,186,2630	0/1:6,11:16:10.02:10,0,37	0/1:10,0:9:36.45:36,0,41	1/1:28,0:22:51.03:933,51,0	0/0:23,0:22:57.03:0,57,812	0/0:29,0:27:74.71:0,75,971	0/0:14,0:14:32.90:0,33,461	0/0:11,0:11:29.18:0,29,435
chr10	110408977	.	T	TAC	7581.06	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-13.875;DP=784;FS=1.093;HRun=0;HaplotypeScore=94.2929;InbreedingCoeff=0.9997;MQ=73.55;MQ0=1;MQRankSum=2.172;QD=41.20;ReadPosRankSum=1.938;VQSLOD=6.7915;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,1765	0/0:13,0:13:36.12:0,36,487	0/0:32,0:24:56.99:0,57,704	0/0:40,0:37:87.23:0,87,1105	0/0:24,0:24:66.22:0,66,893	0/0:26,0:26:66.20:0,66,873	0/0:29,0:29:84.22:0,84,1099	0/0:45,0:45:99:0,120,1537	0/0:15,0:15:39.11:0,39,511	0/0:32,0:31:78.23:0,78,1015	0/0:10,0:10:27.02:0,27,326	1/1:1,22:22:48.16:841,48,0	1/1:5,22:28:66.22:1136,66,0	1/1:3,31:36:87.30:1514,87,0	1/1:3,19:22:57.20:995,57,0	0/0:26,0:25:66.22:0,66,893	0/0:39,0:39:99:0,105,1401	0/0:31,0:30:78.22:0,78,1035	0/0:16,0:16:39.12:0,39,513	0/0:24,0:24:63.21:0,63,851	0/0:59,0:58:99:0,147,1951	1/1:4,24:29:69.24:1201,69,0	1/1:1,15:16:42.14:736,42,0	1/1:4,25:29:66.23:1157,66,0	0/0:23,0:23:60.19:0,60,795	0/0:38,0:38:99:0,111,1488	0/0:16,0:16:39.13:0,39,526	0/0:15,0:15:45.15:0,45,608
chr10	110408982	.	A	ACC	3945.08	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.846;DP=779;FS=0.000;HRun=3;HaplotypeScore=106.4493;InbreedingCoeff=0.9721;MQ=77.40;MQ0=0;MQRankSum=0.164;QD=21.32;ReadPosRankSum=4.172;VQSLOD=1.4835;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,129,1785	0/0:13,0:13:36.12:0,36,498	0/0:33,0:28:71.35:0,71,932	0/0:38,0:35:96.22:0,96,1238	0/0:24,0:24:69.20:0,69,928	0/0:25,0:25:69.20:0,69,928	0/0:31,0:31:87.26:0,87,1178	0/0:45,0:45:99:0,120,1601	0/0:16,0:16:42.12:0,42,568	0/0:33,0:32:76.09:0,76,1036	0/0:11,0:11:30.07:0,30,383	1/1:23,0:22:35.09:442,35,0	1/1:27,0:27:18.90:540,19,0	1/1:35,0:35:66.40:799,66,0	1/1:22,1:23:35.18:533,35,0	0/0:26,0:25:75.20:0,75,992	0/0:37,0:37:99:0,105,1449	0/0:29,0:29:81.23:0,81,1108	0/0:14,0:14:39.12:0,39,528	0/0:26,0:26:69.19:0,69,913	0/0:57,0:56:99:0,153,2065	1/1:27,3:30:47.57:668,48,0	1/1:19,0:19:4.22:352,4,0	1/1:28,0:27:46.17:610,46,0	0/0:22,0:22:60.20:0,60,837	0/0:38,0:38:99:0,111,1534	0/0:15,0:15:39.13:0,39,545	0/0:15,0:15:45.15:0,45,629
chr10	110409539	.	TG	T	15430.62	PASS	AB=0.770;AC=54;AF=0.964;AN=56;BaseQRankSum=-4.063;DP=590;FS=0.000;HRun=6;HaplotypeScore=64.4146;InbreedingCoeff=-0.0363;MQ=76.40;MQ0=0;MQRankSum=-4.153;QD=26.15;ReadPosRankSum=3.059;VQSLOD=5.0757;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:32:75.18:806,75,0	1/1:1,8:9:21.05:226,21,0	0/1:8,5:13:27.40:117,0,27	0/1:7,2:9:30.33:30,0,34	1/1:0,20:20:48.12:515,48,0	1/1:0,21:21:63.16:677,63,0	1/1:1,23:24:51.13:547,51,0	1/1:7,32:38:90.20:957,90,0	1/1:0,14:14:36.09:387,36,0	1/1:3,17:20:48.11:508,48,0	1/1:1,13:14:39.10:419,39,0	1/1:1,24:25:69.17:741,69,0	1/1:3,19:22:54.14:580,54,0	1/1:0,14:14:30.08:322,30,0	1/1:1,11:12:30.07:322,30,0	1/1:1,13:14:36.09:387,36,0	1/1:0,30:30:84.21:903,84,0	1/1:0,23:23:66.17:709,66,0	1/1:2,21:24:63.12:664,63,0	1/1:1,18:19:50.49:522,50,0	1/1:4,36:40:99:1096,102,0	1/1:1,22:23:60.15:644,60,0	1/1:1,20:21:45.04:483,45,0	1/1:3,24:27:66.16:709,66,0	1/1:3,19:22:51.13:548,51,0	1/1:4,19:23:57.14:612,57,0	1/1:2,23:25:69.17:741,69,0	1/1:1,10:11:23.93:258,24,0
chr10	110410820	.	ACAAC	A	7139.57	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=4.405;DP=623;FS=4.402;HRun=0;HaplotypeScore=127.7509;InbreedingCoeff=0.9691;MQ=66.51;MQ0=2;MQRankSum=-1.293;QD=30.25;ReadPosRankSum=0.319;VQSLOD=4.6732;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,1:28:51.16:775,51,0	0/0:11,0:11:24.08:0,24,540	0/0:29,0:22:37.74:0,38,768	0/0:19,0:13:26.98:0,27,397	0/0:13,0:13:39.05:0,39,701	0/0:13,0:13:36.12:0,36,802	0/0:29,0:29:45.04:0,45,848	1/1:26,1:26:45.13:680,45,0	1/1:21,1:22:48.15:703,48,0	0/0:28,0:28:69.22:0,69,1518	0/0:19,0:19:48.15:0,48,1070	0/0:30,0:29:57.19:0,57,1003	0/0:26,0:26:69.21:0,69,1385	0/0:26,0:26:66.14:0,66,1258	0/0:30,0:30:72.23:0,72,1458	0/0:21,0:21:57.12:0,57,1182	1/1:9,2:11:24.07:357,24,0	1/1:19,2:21:48.13:689,48,0	1/1:14,3:17:42.11:602,42,0	1/1:16,3:18:45.11:682,45,0	1/1:6,20:26:3.01:51,3,0	0/0:25,0:25:60.10:0,60,1286	0/0:17,0:17:42.13:0,42,884	0/0:33,0:33:77.53:0,78,1485	0/0:18,0:18:21.07:0,21,463	1/1:22,5:27:69.22:1061,69,0	1/1:28,5:33:87.29:1346,87,0	1/1:2,3:5:12.04:194,12,0
chr10	110410837	.	CA	C	3739.67	PASS	AB=0.689;AC=17;AF=0.304;AN=56;BaseQRankSum=6.924;DP=620;FS=0.752;HRun=3;HaplotypeScore=122.7904;InbreedingCoeff=0.4712;MQ=52.66;MQ0=13;MQRankSum=1.460;QD=15.58;ReadPosRankSum=2.916;VQSLOD=3.3474;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,14:21:0.87:441,1,0	0/0:11,0:11:29.83:0,30,364	0/0:30,1:16:46.70:0,47,624	0/0:21,0:7:18.05:0,18,225	0/0:14,0:13:30.10:0,30,413	0/0:15,0:15:13.76:0,14,461	0/0:21,1:22:32.21:0,32,491	1/1:14,10:23:28.14:278,28,0	1/1:9,13:22:2.65:414,3,0	0/0:26,0:26:75.17:0,75,1015	0/0:18,0:18:48.16:0,48,671	0/0:30,0:29:83.19:0,83,896	0/0:27,0:27:74.84:0,75,945	0/0:25,0:25:69.14:0,69,873	0/0:29,0:29:74.49:0,74,984	0/0:20,0:20:57.16:0,57,781	0/1:12,5:17:27.82:181,0,28	0/1:9,11:20:4.86:376,0,5	0/1:10,8:17:26.85:255,0,27	0/1:12,12:23:31.23:316,0,31	1/1:21,0:20:3:26,3,0	0/0:25,0:25:68.87:0,69,899	0/0:19,0:19:44.83:0,45,594	0/0:32,0:32:73.52:0,74,963	0/0:15,0:15:21.06:0,21,278	0/1:16,16:30:17.95:544,0,18	1/1:14,22:36:26.04:818,26,0	1/1:3,1:4:8.67:91,9,0
chr10	110410872	.	A	AAC	2340.07	PASS	AB=0.933;AC=41;AF=0.732;AN=56;BaseQRankSum=8.465;DP=635;FS=17.541;HRun=0;HaplotypeScore=166.0922;InbreedingCoeff=0.5503;MQ=45.75;MQ0=25;MQRankSum=-6.164;QD=4.44;ReadPosRankSum=8.777;VQSLOD=0.5249;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:20:16.55:64,17,0	0/1:13,0:13:2.12:2,0,45	0/0:21,0:4:7.53:0,8,51	0/0:10,0:1:2.92:0,3,17	0/1:15,0:11:0.17:68,0,0	0/1:18,0:18:14.73:141,0,15	1/1:22,0:18:6.52:60,7,0	1/1:34,0:34:61.43:310,61,0	1/1:24,0:24:32.24:117,32,0	0/0:41,0:35:52.92:0,53,488	0/0:19,0:18:20.09:0,20,230	1/1:30,0:29:36.20:108,36,0	1/1:26,0:26:20.72:79,21,0	1/1:21,0:21:26.29:105,26,0	1/1:27,0:27:30.79:147,31,0	0/0:17,0:16:36.86:0,37,270	1/1:20,0:18:15.67:56,16,0	1/1:20,0:19:22.86:92,23,0	1/1:18,0:17:23.62:86,24,0	1/1:30,0:29:20.51:98,21,0	1/1:9,0:8:9.94:37,10,0	1/1:22,0:22:32.91:174,33,0	1/1:22,0:22:22.80:114,23,0	1/1:30,0:30:56.59:283,57,0	0/1:14,10:24:28.45:33,0,28	1/1:36,0:33:56.06:184,56,0	1/1:33,0:32:41.81:146,42,0	0/1:6,0:4:13.27:15,0,13
chr10	110410873	.	A	AC	4140.83	PASS	AB=0.891;AC=39;AF=0.696;AN=56;BaseQRankSum=9.840;DP=632;FS=33.712;HRun=0;HaplotypeScore=149.5349;InbreedingCoeff=0.6004;MQ=46.69;MQ0=23;MQRankSum=-6.908;QD=8.14;ReadPosRankSum=10.544;VQSLOD=1.5991;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:19:18.97:84,19,0	0/0:14,0:13:16.09:0,16,100	0/0:20,0:4:11.66:0,12,75	0/0:11,0:2:3:0,3,26	0/1:9,6:11:16.72:63,0,17	0/1:18,0:18:78.12:92,0,78	0/1:15,8:19:26.56:27,0,34	1/1:34,0:34:76.37:495,76,0	1/1:23,0:23:44.73:203,45,0	0/0:41,0:35:80.73:0,81,649	0/0:19,0:18:32.60:0,33,250	1/1:30,0:29:66.63:289,67,0	1/1:24,0:24:35.41:171,35,0	1/1:21,0:21:38.30:188,38,0	1/1:27,0:27:44.35:241,44,0	0/0:18,0:17:40.07:0,40,299	1/1:20,0:18:19.94:90,20,0	1/1:21,0:20:25.47:113,25,0	1/1:18,0:17:35.23:168,35,0	1/1:29,0:28:51.48:273,51,0	1/1:6,4:9:16.93:99,17,0	1/1:21,0:21:47.41:276,47,0	1/1:21,0:21:33.19:177,33,0	1/1:19,11:30:66.95:433,67,0	0/1:27,0:23:0.57:1,0,92	1/1:36,0:33:80.26:390,80,0	1/1:33,0:32:57.01:238,57,0	0/1:6,0:4:4.13:29,0,4
chr10	110411478	.	G	GACTA	3804.49	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=0.780;DP=639;FS=1.847;HRun=0;HaplotypeScore=111.5402;InbreedingCoeff=0.9941;MQ=92.32;MQ0=1;MQRankSum=-8.854;QD=59.45;ReadPosRankSum=1.382;VQSLOD=4.9912;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,12:13:30.06:712,30,0	0/0:6,0:6:17.99:0,18,265	0/0:28,0:27:72.19:0,72,1223	0/0:30,0:30:71.97:0,72,1187	0/0:11,0:11:32.86:0,33,501	0/0:22,0:22:63.20:0,63,1143	0/0:39,0:39:99:0,102,1856	1/1:1,6:7:21.06:479,21,0	1/1:1,17:18:51.18:1339,51,0	0/0:25,0:25:69.23:0,69,1249	0/0:10,0:10:27.01:0,27,431	0/0:41,0:41:99:0,114,2079	0/0:38,0:38:99:0,108,1950	0/0:43,0:43:99:0,123,2223	0/0:26,0:26:78.27:0,78,1448	0/0:31,0:31:90.31:0,90,1678	1/1:1,14:15:24.08:636,24,0	1/1:3,8:11:24.08:638,24,0	0/0:14,0:14:24.08:0,24,442	0/0:16,0:16:48.15:0,48,865	0/0:71,0:70:99:0,184,3331	0/0:12,0:12:36.11:0,36,640	0/0:10,0:10:21.07:0,21,392	0/0:33,0:33:93.32:0,93,1733	0/0:18,0:18:51.15:0,51,889	0/0:20,0:19:48.16:0,48,882	0/0:22,0:22:66.21:0,66,1199	0/0:9,0:9:27.09:0,27,504
chr10	110413190	.	G	GT	7303.24	PASS	AB=0.735;AC=36;AF=0.643;AN=56;BaseQRankSum=7.559;DP=629;FS=69.312;HRun=1;HaplotypeScore=288.3916;InbreedingCoeff=0.2848;MQ=65.64;MQ0=1;MQRankSum=-12.920;QD=15.91;ReadPosRankSum=-1.384;VQSLOD=1.1536;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:17:2.50:9,2,0	0/0:11,0:11:33.11:0,33,462	0/0:27,0:25:58.27:0,58,864	0/0:31,0:29:67.40:0,67,959	1/1:3,9:12:8.83:133,9,0	1/1:0,0:10:3.01:48,3,0	1/1:3,9:12:24.08:354,24,0	1/1:1,0:1:2.97:20,3,0	0/1:4,14:18:8.81:445,0,9	0/0:51,0:51:99:0,147,2040	0/0:18,0:18:54.18:0,54,753	0/1:35,2:54:43.18:43,0,1304	0/1:28,10:40:99:407,0,847	0/1:18,18:37:99:746,0,521	0/1:32,15:49:99:672,0,1014	0/0:30,1:31:45.51:0,46,1211	1/1:0,7:8:15.05:239,15,0	1/1:0,7:7:15.05:239,15,0	1/1:0,5:5:15.02:212,15,0	1/1:0,9:12:27.09:421,27,0	1/1:3,9:12:13.53:159,14,0	0/1:20,29:52:99:861,0,517	0/1:23,24:52:99:973,0,465	0/1:20,7:27:57.73:58,0,382	1/1:0,8:8:18.06:287,18,0	1/1:1,11:14:42.12:643,42,0	1/1:0,7:8:18.06:287,18,0	1/1:1,3:4:3.01:48,3,0
chr10	110413201	.	TC	T	3054.71	PASS	AB=0.708;AC=7;AF=0.125;AN=56;BaseQRankSum=4.175;DP=570;FS=56.751;HRun=1;HaplotypeScore=282.9144;InbreedingCoeff=-0.1866;MQ=68.14;MQ0=0;MQRankSum=-9.943;QD=11.79;ReadPosRankSum=1.684;VQSLOD=0.3760;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:3.01:0,3,30	0/0:10,0:10:30.10:0,30,480	0/0:25,0:25:56.09:0,56,943	0/0:30,0:27:77.01:0,77,1049	0/0:12,0:12:15.03:0,15,149	0/0:10,0:10:3.01:0,3,31	0/0:12,0:12:33.06:0,33,328	0/0:2,0:2:6.01:0,6,58	0/0:15,1:16:1.71:0,2,293	0/0:47,0:47:99:0,141,2253	0/0:17,0:17:51.16:0,51,790	0/1:27,22:49:99:793,0,175	0/1:17,14:31:99:492,0,201	0/1:24,10:34:99:282,0,458	0/1:22,23:45:99:662,0,404	0/0:34,0:34:99:0,102,1596	0/0:10,0:10:15.03:0,15,152	0/0:9,0:9:27.04:0,27,258	0/0:4,0:4:11.97:0,12,107	0/0:9,0:9:10.27:0,10,121	0/0:11,0:11:20.61:0,21,181	0/1:29,12:41:99:296,0,481	0/1:24,14:38:99:375,0,378	0/1:9,12:21:28.43:283,0,28	0/0:5,0:5:7.91:0,8,88	0/0:12,0:12:35.96:0,36,322	0/0:13,0:13:32.98:0,33,311	0/0:4,0:4:5.91:0,6,46
chr10	110413215	.	GT	G	2447.70	PASS	AB=0.736;AC=7;AF=0.125;AN=56;BaseQRankSum=6.918;DP=532;FS=85.973;HRun=1;HaplotypeScore=260.5812;InbreedingCoeff=-0.1673;MQ=62.25;MQ0=4;MQRankSum=-8.416;QD=11.13;ReadPosRankSum=3.074;VQSLOD=0.4285;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:9.03:0,9,133	0/0:9,0:9:27.06:0,27,406	0/0:28,0:24:72:0,72,1021	0/0:24,0:18:51.14:0,51,773	0/0:9,0:9:15.05:0,15,231	0/0:10,0:10:3.01:0,3,48	0/0:14,0:14:33.11:0,33,509	0/0:8,0:8:21.07:0,21,329	0/0:14,0:14:36.12:0,36,573	0/0:45,0:45:99:0,135,2159	0/0:18,0:18:54.17:0,54,839	0/1:26,15:41:99:576,0,292	0/1:14,10:24:99:342,0,446	0/1:22,9:31:99:263,0,894	0/1:21,15:36:99:592,0,721	0/0:34,0:34:99:0,102,1628	0/0:9,0:9:21.07:0,21,335	0/0:11,0:11:33.11:0,33,512	0/0:7,0:6:18.06:0,18,287	0/0:7,0:7:12.04:0,12,191	0/0:16,0:16:21.07:0,21,329	0/1:30,6:37:99:164,0,894	0/1:23,9:32:99:294,0,719	0/1:7,12:19:99:345,0,105	0/0:6,0:6:9.03:0,9,143	0/0:10,0:9:24.08:0,24,377	0/0:10,0:10:30.10:0,30,478	0/0:3,0:3:3.01:0,3,48
chr10	110413401	.	GT	G	1309.42	PASS	AB=0.780;AC=8;AF=0.143;AN=56;BaseQRankSum=0.491;DP=475;FS=7.579;HRun=1;HaplotypeScore=192.3268;InbreedingCoeff=0.0920;MQ=64.32;MQ0=0;MQRankSum=-6.581;QD=6.89;ReadPosRankSum=-0.427;VQSLOD=0.0115;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:30.08:0,30,422	0/0:10,0:10:30.09:0,30,455	0/0:24,0:22:66.20:0,66,1029	0/0:27,0:26:72.20:0,72,1103	0/0:7,0:7:18.06:0,18,269	0/0:10,0:10:21.07:0,21,335	0/0:8,0:8:24.08:0,24,383	0/0:29,0:25:75.26:0,75,1196	0/0:6,0:6:18.04:0,18,263	0/0:26,0:26:78.20:0,78,1172	0/0:25,0:25:69.22:0,69,1078	0/1:16,7:23:99:226,0,613	0/1:12,10:22:99:317,0,463	0/1:10,10:20:99:320,0,409	0/1:23,7:30:99:214,0,830	0/0:18,0:18:54.18:0,54,855	0/0:11,0:11:30.10:0,30,477	0/0:5,0:5:12.04:0,12,189	0/0:7,0:7:15.05:0,15,239	0/0:9,0:9:21.07:0,21,334	0/0:10,0:10:7.56:0,8,99	0/1:35,7:42:98.77:99,0,1424	0/1:37,5:42:63.18:63,0,1347	1/1:2,9:11:15.32:212,15,0	0/0:9,0:9:21.07:0,21,335	0/0:15,0:15:42.14:0,42,650	0/0:15,0:15:36.08:0,36,547	0/0:2,0:2:6.02:0,6,96
chr10	110414373	.	A	AAC	2076.08	PASS	AB=0.736;AC=18;AF=0.321;AN=56;BaseQRankSum=-1.167;DP=550;FS=42.180;HRun=0;HaplotypeScore=84.3972;InbreedingCoeff=-0.0471;MQ=49.84;MQ0=17;MQRankSum=2.630;QD=5.70;ReadPosRankSum=6.471;VQSLOD=0.9329;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,2:37:61.73:178,0,62	0/0:5,0:5:10.21:0,10,52	0/0:29,0:10:23.98:0,24,195	0/1:18,0:8:16:16,0,27	0/1:5,3:18:5.42:247,0,5	0/1:7,23:34:0.65:311,0,1	1/1:4,17:24:19.86:369,20,0	0/1:24,0:34:99:156,0,154	0/1:2,0:20:8.03:63,0,8	0/0:20,0:20:45.29:0,45,403	0/0:9,0:9:21.31:0,21,154	0/0:17,0:17:17.45:0,17,147	0/0:18,0:17:19.27:0,19,110	0/0:16,0:16:15.03:0,15,171	0/1:17,0:17:14.77:15,0,110	0/0:13,0:13:35.87:0,36,314	0/1:6,0:24:8.20:59,0,8	0/1:8,1:20:69.63:90,0,70	0/1:25,0:27:99:196,0,147	0/1:14,0:13:53.16:53,0,64	0/0:3,1:10:0.98:0,1,3	0/0:16,0:15:10.02:0,10,139	0/0:8,0:7:17.80:0,18,122	0/0:23,0:21:13.74:0,14,77	0/1:4,6:10:0.46:96,0,0	0/1:22,0:22:88.49:213,0,88	0/1:9,0:28:32.69:148,0,33	1/1:5,0:3:3:27,3,0
chr10	110416347	.	A	AGTGTGTGT	10057.94	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=3.808;DP=741;FS=5.298;HRun=0;HaplotypeScore=244.9140;InbreedingCoeff=0.7737;MQ=55.60;MQ0=6;MQRankSum=-9.995;QD=17.22;ReadPosRankSum=-2.099;VQSLOD=3.5716;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:35:11.20:99,11,0	0/0:7,0:7:12.04:0,12,282	0/0:35,0:20:17.99:0,18,262	0/0:33,0:24:20.62:0,21,369	1/1:10,8:20:3.48:124,3,0	1/1:17,6:25:27.08:875,27,0	1/1:30,11:42:29.67:1208,30,0	1/1:33,0:30:16.39:369,16,0	1/1:19,0:21:6.02:210,6,0	0/0:25,0:27:54.14:0,54,1109	0/0:19,0:19:45.13:0,45,996	1/1:33,0:36:12.03:395,12,0	1/1:25,0:29:27.98:941,28,0	1/1:28,0:35:3.01:104,3,0	1/1:28,0:31:12.50:419,13,0	0/0:29,0:31:72.23:0,72,1717	1/1:25,0:28:15.05:488,15,0	1/1:18,0:21:15.05:523,15,0	1/1:23,0:23:26.28:664,26,0	1/1:19,0:22:11.91:419,12,0	1/1:39,0:37:2.61:100,3,0	1/1:20,0:20:3.48:117,3,0	1/1:11,0:13:3.01:30,3,0	1/1:22,0:21:8.84:313,9,0	1/1:7,8:15:21.07:866,21,0	1/1:27,0:26:21.07:688,21,0	1/1:15,0:20:21.03:671,21,0	1/1:13,0:12:21.02:434,21,0
chr10	110416638	.	G	GTTTT	3480.06	PASS	AB=0.871;AC=45;AF=0.804;AN=56;BaseQRankSum=2.853;DP=497;FS=9.117;HRun=14;HaplotypeScore=95.9831;InbreedingCoeff=0.5584;MQ=71.26;MQ0=0;MQRankSum=-2.809;QD=8.43;ReadPosRankSum=-1.669;VQSLOD=-0.6049;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:23:16.59:114,17,0	0/1:11,0:11:3.28:3,0,184	0/0:25,0:16:8.58:0,9,185	0/1:12,0:11:9.52:10,0,39	1/1:9,0:15:15.90:182,16,0	1/1:0,7:8:3.01:65,3,0	1/1:6,7:15:7.58:134,8,0	1/1:31,0:34:22.34:335,22,0	1/1:3,0:11:3:25,3,0	0/0:18,0:21:13.36:0,13,350	0/0:19,0:22:23.66:0,24,458	1/1:8,0:16:8.53:61,9,0	1/1:3,0:16:6.30:75,6,0	1/1:3,0:13:8.70:49,9,0	1/1:9,0:30:27.01:178,27,0	0/0:16,0:16:23.41:0,23,278	1/1:10,0:28:49.41:465,49,0	1/1:8,0:24:5.02:198,5,0	1/1:5,0:11:21.25:193,21,0	1/1:8,0:17:21.50:257,22,0	1/1:9,0:21:13.75:114,14,0	1/1:7,0:14:9.97:102,10,0	1/1:6,0:16:7.45:41,7,0	1/1:4,0:12:17.55:102,18,0	1/1:12,0:12:18.05:293,18,0	1/1:9,0:23:9.59:340,10,0	0/1:7,0:18:0.05:79,0,0	1/1:2,0:7:7.57:66,8,0
chr10	110418648	.	TGTGTG	T	34569.34	PASS	AB=0.560;AC=43;AF=0.768;AN=56;BaseQRankSum=13.201;DP=816;FS=2.358;HRun=0;HaplotypeScore=174.8170;InbreedingCoeff=0.9015;MQ=71.98;MQ0=2;MQRankSum=-11.788;QD=52.54;ReadPosRankSum=4.690;VQSLOD=5.4485;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,56:57:99:3178,144,0	0/0:13,0:13:39.13:0,39,1184	0/0:31,0:30:87.09:0,87,2520	0/0:27,0:27:78.26:0,78,2310	1/1:1,37:38:87.30:1928,87,0	1/1:1,17:18:45.15:994,45,0	1/1:1,45:46:93.32:2062,93,0	1/1:1,26:27:78.24:1566,78,0	1/1:2,28:29:78.27:1730,78,0	0/0:24,0:24:69.23:0,69,2156	0/0:27,0:27:78.27:0,78,2455	1/1:1,30:31:78.27:1739,78,0	1/1:1,28:29:63.22:1400,63,0	1/1:1,34:34:72.25:1586,72,0	1/1:2,42:44:99:2524,114,0	0/0:36,0:36:99:0,105,3323	1/1:0,33:33:75.26:1672,75,0	1/1:2,6:8:18.06:401,18,0	1/1:0,17:17:51.17:1050,51,0	1/1:2,32:34:81.28:1781,81,0	1/1:1,30:31:66.18:1420,66,0	1/1:0,35:35:78.27:1733,78,0	1/1:2,23:25:63.22:1395,63,0	1/1:1,28:29:60.19:1338,60,0	1/1:0,20:20:54.19:1195,54,0	1/1:2,29:31:84.29:1800,84,0	1/1:0,26:26:66.23:1471,66,0	0/1:3,11:14:14.57:606,0,15
chr10	110419264	.	AACACACACACAC	A	1990.83	PASS	AB=0.831;AC=26;AF=0.464;AN=56;BaseQRankSum=3.462;DP=511;FS=9.818;HRun=0;HaplotypeScore=182.2934;InbreedingCoeff=0.6251;MQ=61.14;MQ0=10;MQRankSum=-3.794;QD=7.57;ReadPosRankSum=-0.321;VQSLOD=2.0888;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,3:27:9.03:152,9,0	0/0:6,0:6:12.04:0,12,613	0/0:47,0:32:5.98:0,6,64	0/0:37,0:20:3.90:0,4,72	0/1:12,0:16:0:1,0,0	1/1:11,8:20:6.02:138,6,0	1/1:14,0:19:1.55:4,2,0	0/1:23,0:22:0.01:0,0,0	1/1:13,3:16:11.86:143,12,0	0/0:21,0:20:27.08:0,27,1096	0/0:15,0:15:30.10:0,30,1094	0/0:16,0:15:12:0,12,335	0/0:13,0:13:17.87:0,18,498	0/0:13,0:13:9.90:0,10,215	0/0:21,0:21:14.52:0,15,494	0/0:18,0:20:29.12:0,29,852	1/1:30,0:30:6.02:171,6,0	0/1:11,2:14:15.03:240,0,15	1/1:15,0:14:9.03:253,9,0	1/1:7,3:11:1.82:5,2,0	1/1:20,1:20:3.39:51,3,0	0/0:12,0:12:8.73:0,9,354	0/0:11,0:11:8.91:0,9,197	0/0:15,0:16:12.04:0,12,480	0/1:5,0:11:0:0,0,0	1/1:10,4:15:21.06:581,21,0	1/1:17,0:17:5.10:226,5,0	1/1:1,3:3:6.02:201,6,0
chr10	110419294	.	CACACACACACACAGAGAAAGAGAG	C	5627.05	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=-0.704;DP=495;FS=8.467;HRun=0;HaplotypeScore=224.3382;InbreedingCoeff=0.6120;MQ=39.14;MQ0=26;MQRankSum=-7.038;QD=18.76;ReadPosRankSum=1.253;VQSLOD=2.7235;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:30:9.03:170,9,0	0/0:6,0:6:18.06:0,18,911	0/0:7,0:2:5.98:0,6,64	0/0:5,0:1:3.01:0,3,70	0/0:11,0:11:6.90:0,7,77	1/1:21,0:20:4.33:185,4,0	0/1:15,0:13:0.37:0,0,39	1/1:22,0:18:41.58:286,42,0	1/1:18,2:20:20.88:599,21,0	0/0:20,0:19:40.83:0,41,2635	0/0:23,0:23:21.49:0,21,1233	0/0:15,0:14:1.45:0,1,326	0/0:13,0:13:10:0,10,729	0/0:12,0:11:14.82:0,15,305	0/1:35,0:34:33.57:34,0,1020	0/0:27,0:27:57.60:0,58,2532	1/1:8,21:29:9.03:479,9,0	0/1:16,0:15:46.28:577,0,46	1/1:3,0:7:15.01:445,15,0	1/1:22,0:20:3.10:74,3,0	1/1:23,0:17:2.84:50,3,0	0/0:16,0:15:10.77:0,11,378	0/0:10,0:10:7.28:0,7,196	0/0:18,0:17:21.54:0,22,824	0/0:12,0:11:12.55:0,13,136	1/1:22,0:21:50.30:1502,50,0	1/1:12,14:25:17.14:776,17,0	1/1:9,0:8:12.04:449,12,0
chr10	110419306	.	CAGAGAAAGAGAG	C	3834.43	PASS	AB=0.882;AC=28;AF=0.538;AN=52;BaseQRankSum=-0.250;DP=475;FS=3.871;HRun=0;HaplotypeScore=186.8767;InbreedingCoeff=0.3739;MQ=39.98;MQ0=23;MQRankSum=-6.459;QD=11.02;ReadPosRankSum=3.770;VQSLOD=2.3122;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,17:26:2.96:19,3,0	0/0:7,0:7:20.59:0,21,320	./.	./.	0/0:13,0:13:13.28:0,13,158	0/1:20,0:20:1.77:45,0,2	0/0:19,0:17:14.68:0,15,151	1/1:25,0:20:56.18:386,56,0	1/1:14,4:19:18.28:424,18,0	0/0:21,0:20:28.85:0,29,1389	0/1:23,0:23:16.58:17,0,415	0/1:12,0:11:2.15:28,0,2	0/1:12,1:13:35.85:43,0,36	1/1:10,0:9:0.13:28,0,0	0/1:33,0:33:34.60:143,0,35	0/0:30,0:30:36.64:0,37,1593	1/1:22,0:23:9.03:291,9,0	1/1:5,9:15:17.69:360,18,0	1/1:7,1:6:11.91:169,12,0	0/1:6,19:23:1.29:48,0,1	0/1:8,11:13:0.09:0,0,0	0/0:15,0:14:3.53:0,4,45	0/0:10,0:10:1.60:0,2,8	0/1:19,0:18:56.43:56,0,173	0/0:12,0:11:12.86:0,13,89	1/1:5,16:20:46.65:985,47,0	1/1:18,0:23:20.97:545,21,0	1/1:4,4:8:11.94:248,12,0
chr10	110420152	.	TTTTGTTTG	T	11292.12	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=10.405;DP=673;FS=1.986;HRun=0;HaplotypeScore=181.6237;InbreedingCoeff=0.7078;MQ=57.02;MQ0=20;MQRankSum=-9.220;QD=23.05;ReadPosRankSum=-1.476;VQSLOD=4.2955;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:40:37.09:1037,37,0	0/0:14,0:14:33.11:0,33,1357	0/0:64,0:20:3.01:0,3,78	0/0:61,0:20:3.01:0,3,43	1/1:11,0:30:33.01:560,33,0	1/1:8,0:20:21.07:386,21,0	1/1:8,0:18:12.04:223,12,0	1/1:30,0:29:8.69:103,9,0	1/1:18,0:18:24.04:520,24,0	0/0:28,0:28:45.15:0,45,1804	0/0:15,0:15:33.11:0,33,1240	1/1:5,13:18:27.05:624,27,0	1/1:4,3:7:6.02:151,6,0	1/1:8,10:18:21.07:529,21,0	1/1:8,19:27:48.13:1154,48,0	0/1:17,0:17:42.03:42,0,1158	1/1:20,0:20:35.92:576,36,0	1/1:19,0:19:11.96:227,12,0	1/1:20,0:19:14.97:274,15,0	1/1:18,0:18:26.96:475,27,0	1/1:15,0:15:8.86:115,9,0	1/1:11,20:31:50.96:1006,51,0	1/1:5,10:15:20.68:528,21,0	1/1:17,8:25:5.06:150,5,0	1/1:3,0:14:30.10:552,30,0	1/1:27,0:27:31.04:713,31,0	1/1:28,0:28:57.06:1174,57,0	1/1:14,0:13:9:171,9,0
chr10	110420153	.	TTTGTTTG	T	7295.82	PASS	AB=0.905;AC=24;AF=0.429;AN=56;BaseQRankSum=16.071;DP=660;FS=3.463;HRun=0;HaplotypeScore=179.1307;InbreedingCoeff=-0.7376;MQ=56.63;MQ0=19;MQRankSum=-12.391;QD=13.39;ReadPosRankSum=6.075;VQSLOD=3.1489;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,13:40:97.36:760,0,97	0/0:14,0:14:42.13:0,42,1390	0/0:58,0:17:26.02:0,26,266	0/1:56,0:20:49.58:50,0,215	0/1:30,0:29:99:348,0,344	0/1:20,0:20:99:253,0,199	0/1:18,0:18:99:137,0,208	0/1:30,0:29:18.64:19,0,86	0/1:12,6:18:16.06:409,0,16	0/0:27,0:27:75.21:0,75,2043	0/0:15,0:15:42.13:0,42,1312	0/1:18,0:18:99:319,0,122	0/1:6,0:6:75.17:75,0,76	0/1:18,0:18:99:277,0,137	0/1:27,0:27:99:606,0,182	0/1:16,1:17:14.16:14,0,1253	0/1:16,5:21:53.79:443,0,54	0/1:17,2:19:52.52:155,0,53	0/1:10,10:19:32.75:280,0,33	0/1:11,6:18:32.06:316,0,32	0/1:15,1:16:58.59:139,0,59	0/1:31,0:31:99:464,0,277	0/1:14,0:14:89.14:283,0,89	0/1:25,0:25:51.20:51,0,276	0/1:14,0:14:52.56:387,0,53	0/1:16,11:27:52.66:549,0,53	0/1:15,12:30:10.48:855,0,10	0/1:9,3:11:42.04:107,0,42
chr10	110420813	.	CCACA	C	8840.15	PASS	AB=0.826;AC=29;AF=0.518;AN=56;BaseQRankSum=6.539;DP=776;FS=0.000;HRun=0;HaplotypeScore=172.0275;InbreedingCoeff=0.7430;MQ=48.71;MQ0=62;MQRankSum=-2.030;QD=19.47;ReadPosRankSum=2.097;VQSLOD=4.6841;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,26:45:57.15:941,57,0	0/0:14,0:14:36.10:0,36,727	0/0:44,0:14:12.01:0,12,203	0/0:41,0:14:15.04:0,15,259	1/1:10,19:29:32.86:493,33,0	1/1:8,20:29:46.40:722,46,0	0/1:11,10:22:10.17:342,0,10	0/1:28,8:36:10.84:627,0,11	1/1:6,13:19:33.11:544,33,0	0/0:46,0:41:90.27:0,90,1927	0/0:31,0:28:68.90:0,69,1612	0/0:30,0:28:24.87:0,25,324	0/1:26,0:24:0.91:1,0,246	0/0:30,0:29:20.26:0,20,351	0/0:21,0:21:6.19:0,6,184	0/0:11,0:11:27.09:0,27,636	1/1:10,12:22:27.91:448,28,0	1/1:11,11:19:26.34:444,26,0	1/1:19,2:11:10.05:174,10,0	1/1:10,17:26:30.10:494,30,0	1/1:19,25:40:38.71:644,39,0	0/0:16,0:15:2.19:0,2,95	0/0:16,0:15:11.64:0,12,82	0/0:20,0:20:2.54:0,3,24	1/1:10,13:22:33.11:533,33,0	1/1:12,30:37:90.16:1394,90,0	1/1:5,15:23:43.68:654,44,0	1/1:5,9:14:24.08:384,24,0
chr10	110420838	.	C	CACACATG	1420.92	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=3.641;DP=676;FS=8.025;HRun=0;HaplotypeScore=222.1224;InbreedingCoeff=0.7741;MQ=58.92;MQ0=12;MQRankSum=-8.761;QD=7.98;ReadPosRankSum=2.254;VQSLOD=1.6870;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:80.41:0,80,1145	0/0:17,0:17:45.11:0,45,1003	0/0:36,0:20:56.76:0,57,961	0/0:21,0:9:22.63:0,23,406	0/0:29,0:29:28.84:0,29,244	0/0:26,0:25:2.91:0,3,278	0/1:17,0:17:7.15:7,0,148	0/0:35,0:35:68.31:0,68,360	0/0:20,0:20:50.36:0,50,653	0/0:38,0:37:99:0,104,2163	0/0:31,0:31:76.13:0,76,1802	1/1:1,0:27:27.01:430,27,0	1/1:4,1:20:4.07:363,4,0	1/1:2,0:31:26.99:419,27,0	1/1:1,0:22:17.38:236,17,0	0/0:10,0:10:27.09:0,27,691	0/0:16,0:16:35.78:0,36,531	0/0:15,0:15:38.69:0,39,542	0/0:20,0:19:43.66:0,44,318	0/0:26,0:25:33.96:0,34,551	0/0:31,0:30:41.97:0,42,718	1/1:1,0:17:5.99:82,6,0	1/1:1,0:24:2.72:16,3,0	1/1:0,0:18:3.01:42,3,0	0/0:20,0:20:35.05:0,35,355	0/0:35,0:35:91.14:0,91,1219	0/0:21,0:21:50.43:0,50,720	0/0:11,0:11:29.93:0,30,416
chr10	110422736	.	C	CA	5669.09	PASS	AB=0.923;AC=23;AF=0.411;AN=56;BaseQRankSum=-7.440;DP=599;FS=0.000;HRun=9;HaplotypeScore=70.6365;InbreedingCoeff=0.8971;MQ=65.80;MQ0=0;MQRankSum=-3.603;QD=21.07;ReadPosRankSum=-0.786;VQSLOD=5.0639;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,29:36:60.50:774,61,0	0/0:6,0:6:17.96:0,18,147	0/0:30,0:19:36.42:0,36,271	0/0:22,0:16:10.33:0,10,142	0/0:19,0:19:41.97:0,42,361	0/0:11,0:11:23.93:0,24,201	0/0:15,0:16:41.01:0,41,341	1/1:6,17:23:51.03:514,51,0	1/1:3,15:18:45.12:496,45,0	0/0:30,1:31:50.63:0,51,651	0/0:21,0:21:59.99:0,60,521	0/0:17,0:17:44.98:0,45,388	0/0:16,0:16:41.96:0,42,358	0/0:22,0:22:45.26:0,45,523	0/0:26,0:27:67.88:0,68,564	0/0:26,1:27:32.80:0,33,514	1/1:6,25:31:37.12:637,37,0	1/1:3,11:14:33.09:365,33,0	1/1:3,19:22:49.14:576,49,0	1/1:6,14:20:51.10:540,51,0	1/1:6,17:23:48.05:500,48,0	0/0:21,0:21:47.97:0,48,412	0/0:26,0:26:68.96:0,69,596	0/1:22,2:24:10.03:10,0,359	0/0:15,0:15:44.83:0,45,370	1/1:7,18:25:14.07:610,14,0	1/1:10,15:26:62.89:626,63,0	1/1:4,0:7:2.98:21,3,0
chr10	110422827	.	G	GAACCC	30517.68	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=11.189;DP=502;FS=4.871;HRun=0;HaplotypeScore=133.4579;InbreedingCoeff=0.9832;MQ=82.87;MQ0=0;MQRankSum=-15.536;QD=78.86;ReadPosRankSum=4.372;VQSLOD=7.1185;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,22:28:72.25:2212,72,0	0/0:3,0:3:9.03:0,9,201	0/0:33,0:33:99:0,99,2119	0/0:27,0:27:78.25:0,78,1612	1/1:0,8:8:21.07:590,21,0	1/1:2,12:14:39.13:1240,39,0	1/1:6,9:16:45.12:1241,45,0	1/1:6,21:28:72.25:2221,72,0	1/1:5,25:32:90.31:2746,90,0	0/0:19,0:19:57.20:0,57,1210	0/0:13,0:13:33.11:0,33,708	1/1:0,11:11:33.11:1050,33,0	1/1:4,12:17:42.14:1316,42,0	1/1:2,14:16:48.16:1469,48,0	1/1:3,27:31:87.30:2746,87,0	0/0:20,0:20:57.20:0,57,1254	1/1:4,14:19:42.14:1334,42,0	1/1:2,7:11:24.08:765,24,0	1/1:8,12:20:48.12:1443,48,0	1/1:3,15:19:54.11:1440,54,0	1/1:5,13:18:39.08:1177,39,0	1/1:3,9:12:27.09:809,27,0	1/1:1,11:12:36.12:1085,36,0	1/1:6,13:20:38.29:961,38,0	1/1:2,9:11:30.10:956,30,0	1/1:3,16:19:54.19:1687,54,0	1/1:4,13:18:51.18:1551,51,0	1/1:0,5:5:15.05:477,15,0
chr10	110424794	.	CA	C	6364.42	PASS	AB=0.614;AC=41;AF=0.759;AN=54;BaseQRankSum=2.622;DP=530;FS=3.458;HRun=9;HaplotypeScore=76.6825;InbreedingCoeff=0.5957;MQ=49.14;MQ0=15;MQRankSum=-1.666;QD=14.73;ReadPosRankSum=1.886;VQSLOD=5.2635;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,22:29:56.48:510,56,0	0/0:10,0:10:14.07:0,14,144	./.	0/0:12,0:4:0.33:0,0,27	1/1:6,10:14:24.01:219,24,0	1/1:4,10:13:33.01:302,33,0	0/1:6,22:21:66.77:187,0,67	1/1:4,11:9:23.99:213,24,0	1/1:3,11:14:23.99:213,24,0	0/0:25,0:23:46.92:0,47,501	0/0:20,1:19:8.64:0,9,346	1/1:9,10:19:32.02:275,32,0	1/1:3,10:13:30:271,30,0	0/1:9,11:19:2.07:233,0,2	1/1:6,17:21:51.01:462,51,0	0/0:18,0:18:15.33:0,15,373	1/1:9,26:33:62.97:567,63,0	1/1:5,15:20:42.02:384,42,0	1/1:3,15:17:42.02:384,42,0	1/1:1,4:4:11.99:105,12,0	1/1:10,8:18:18:164,18,0	1/1:8,10:16:0.11:221,0,0	1/1:7,5:10:15:137,15,0	1/1:6,13:16:33.02:301,33,0	1/1:10,14:20:26.58:235,27,0	0/1:9,12:19:24.18:311,0,24	1/1:10,22:31:44.97:407,45,0	1/1:6,8:12:29.97:264,30,0
chr10	110424808	.	CA	C	1019.71	PASS	AB=0.814;AC=18;AF=0.321;AN=56;BaseQRankSum=4.440;DP=549;FS=3.623;HRun=13;HaplotypeScore=90.9366;InbreedingCoeff=0.4038;MQ=50.58;MQ0=10;MQRankSum=-3.509;QD=4.74;ReadPosRankSum=1.819;VQSLOD=2.4052;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,1:31:31.82:0,32,432	0/0:7,0:7:12.02:0,12,117	0/0:9,0:3:8.85:0,9,63	0/0:10,0:5:4.31:0,4,37	0/1:12,3:14:20.62:21,0,187	0/0:19,1:19:31.66:0,32,419	0/0:22,1:18:10.67:0,11,253	0/1:15,2:13:1.05:1,0,126	0/1:14,2:16:22.62:23,0,115	0/0:25,0:26:53.84:0,54,479	0/1:17,2:18:20.58:21,0,175	1/1:12,6:17:11.66:154,12,0	1/1:6,7:13:20.53:142,21,0	0/1:9,7:18:5.58:103,0,6	1/1:10,17:25:41.47:297,41,0	0/0:17,0:16:23.99:0,24,223	0/0:30,1:30:43.25:0,43,524	0/0:23,0:24:38.13:0,38,310	0/0:28,1:26:28.82:0,29,398	0/1:8,2:9:42.81:43,0,87	0/0:19,0:20:48:0,48,443	0/1:5,9:13:2.59:137,0,3	1/1:3,8:10:16.91:116,17,0	1/1:10,9:19:21.74:143,22,0	0/0:20,0:18:29:0,29,285	0/0:23,0:21:16.62:0,17,290	0/0:34,0:33:36.17:0,36,467	0/1:12,1:11:4.19:4,0,109
chr10	110425092	.	A	AATACAC	1967.79	PASS	AB=0.969;AC=13;AF=0.250;AN=52;BaseQRankSum=3.479;DP=564;FS=0.550;HRun=0;HaplotypeScore=162.6631;InbreedingCoeff=-0.1224;MQ=45.20;MQ0=15;MQRankSum=-3.439;QD=7.16;ReadPosRankSum=0.934;VQSLOD=2.5310;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:30:40.70:74,0,41	0/0:9,0:9:20.72:0,21,327	./.	./.	0/0:17,0:16:17.92:0,18,284	0/0:20,0:19:21.98:0,22,260	0/0:29,0:26:26.45:0,26,266	0/1:30,0:25:99:253,0,170	0/1:22,0:22:57.59:190,0,58	0/0:21,0:17:51.04:0,51,807	0/0:18,0:18:39:0,39,536	0/0:20,0:20:29.11:0,29,389	0/1:26,0:24:44.53:45,0,401	0/0:15,0:15:20.43:0,20,353	0/1:26,0:26:4.50:5,0,536	0/0:20,0:20:51.09:0,51,872	0/0:24,0:24:3.01:0,3,39	0/1:19,0:19:43.19:202,0,43	0/1:8,0:8:41.72:126,0,42	1/1:17,0:17:7.30:321,7,0	0/1:26,0:21:7.22:141,0,7	0/0:20,0:20:30.63:0,31,361	0/0:23,0:23:20.21:0,20,269	0/0:25,0:25:31.95:0,32,401	0/0:20,0:19:29.40:0,29,279	0/1:32,0:32:99:505,0,159	0/1:15,6:26:65.49:185,0,65	0/1:10,0:10:11.22:70,0,11
chr10	110425094	.	TAC	T	928.17	PASS	AB=0.976;AC=13;AF=0.250;AN=52;BaseQRankSum=0.230;DP=583;FS=3.129;HRun=0;HaplotypeScore=134.7483;InbreedingCoeff=0.5450;MQ=45.13;MQ0=14;MQRankSum=2.060;QD=5.69;ReadPosRankSum=-1.303;VQSLOD=3.2972;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:36:8.72:0,9,59	0/1:9,0:9:2.91:3,0,127	./.	./.	1/1:14,3:16:26.90:289,27,0	1/1:15,5:19:26.69:286,27,0	1/1:16,13:26:8.41:102,8,0	0/0:29,0:25:18.94:0,19,161	0/0:21,0:21:5.61:0,6,52	0/0:21,0:17:38.29:0,38,482	0/0:18,0:18:5.87:0,6,278	0/0:22,0:22:26.91:0,27,353	0/0:26,1:25:35.02:0,35,428	0/0:15,0:15:20.91:0,21,247	0/0:26,0:26:20.72:0,21,463	0/0:21,0:21:16.77:0,17,434	1/1:25,0:25:2.80:13,3,0	0/0:18,0:18:16.24:0,16,127	0/0:9,0:9:4.47:0,4,22	0/1:16,0:17:1.50:1,0,55	0/0:31,0:25:8.98:0,9,73	0/0:19,0:19:5.37:0,5,312	0/0:22,0:22:14.64:0,15,181	0/1:24,2:26:99:111,0,204	1/1:13,7:19:6.72:276,7,0	0/0:34,0:35:59.30:0,59,485	0/0:28,0:28:29.30:0,29,217	0/0:4,0:12:3:0,3,26
chr10	110426142	.	C	CTACCTGGCA	56639.74	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-6.662;DP=622;FS=2.454;HRun=0;HaplotypeScore=162.5328;InbreedingCoeff=0.9774;MQ=74.39;MQ0=0;MQRankSum=-14.817;QD=108.92;ReadPosRankSum=2.807;VQSLOD=5.8520;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,19:40:87.12:3784,87,0	0/0:2,0:2:6.02:0,6,190	0/0:22,0:22:63.19:0,63,1762	0/0:21,0:21:50.66:0,51,1387	1/1:5,13:19:33.11:1627,33,0	1/1:5,9:14:34.70:1573,35,0	1/1:15,23:42:99:4637,102,0	1/1:26,4:33:90.29:3376,90,0	1/1:6,14:26:60.21:2756,60,0	0/0:25,0:25:72.20:0,72,2120	0/0:10,0:10:30.10:0,30,892	1/1:10,21:35:93.32:4265,93,0	1/1:4,22:28:78.27:3696,78,0	1/1:14,20:35:99:4436,99,0	1/1:9,17:28:72.25:3294,72,0	0/0:22,0:22:63.22:0,63,1992	1/1:3,12:16:39.13:1874,39,0	1/1:7,11:20:45.15:2097,45,0	1/1:12,4:16:42.14:1864,42,0	1/1:3,6:10:24.08:1103,24,0	1/1:22,12:37:69.24:2900,69,0	1/1:5,8:13:33.11:1626,33,0	1/1:6,11:17:39.13:1831,39,0	1/1:8,8:19:27.09:1087,27,0	1/1:6,14:21:54.19:2553,54,0	1/1:8,13:22:57.20:2715,57,0	1/1:7,11:20:54.18:2335,54,0	1/1:3,6:9:27.09:1210,27,0
chr10	110427993	.	GGTGTGTGTGTGTGTGTGTGTGTGTGTGT	G	13619.54	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.857;DP=676;FS=1.063;HRun=0;HaplotypeScore=433.8372;InbreedingCoeff=0.9715;MQ=62.05;MQ0=21;MQRankSum=-11.967;QD=78.73;ReadPosRankSum=6.238;VQSLOD=2.2778;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:30:48.16:0,48,3754	0/0:5,0:5:9.03:0,9,825	0/0:23,0:12:24.08:0,24,728	0/0:29,0:17:18.53:0,19,874	0/0:13,0:17:36.12:0,36,2852	0/0:18,0:28:54.17:0,54,4212	0/0:27,0:32:72.02:0,72,6266	0/0:29,0:29:60.21:0,60,3661	0/0:20,0:23:42.14:0,42,3763	0/0:17,0:17:39.13:0,39,3541	0/0:10,0:12:18.06:0,18,1544	1/1:9,18:28:54.07:3913,54,0	1/1:14,14:27:36.12:2625,36,0	1/1:10,11:21:21.07:1531,21,0	1/1:14,9:22:21.07:1531,21,0	0/0:18,0:23:48.64:0,49,5093	0/0:25,0:31:67.56:0,68,5492	0/0:13,0:22:45.15:0,45,4192	0/0:13,0:17:36.12:0,36,2374	0/0:17,0:24:55.94:0,56,4945	0/0:36,0:48:66.23:0,66,5213	1/1:8,16:25:33.11:2360,33,0	1/1:14,10:23:15.05:1094,15,0	1/1:16,8:23:9.50:566,10,0	0/0:12,0:20:33.11:0,33,2765	0/0:19,0:28:62.70:0,63,5718	0/0:14,0:27:52.03:0,52,4672	0/0:10,0:9:21.96:0,22,1432
chr10	110429602	.	T	TGGGA	3178.24	PASS	AB=0.895;AC=40;AF=0.714;AN=56;BaseQRankSum=-3.418;DP=244;FS=24.723;HRun=0;HaplotypeScore=49.8674;InbreedingCoeff=0.2940;MQ=74.10;MQ0=2;MQRankSum=0.087;QD=14.92;ReadPosRankSum=-1.546;VQSLOD=1.1846;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,7:14:9.96:288,10,0	0/0:3,0:3:9.03:0,9,148	0/1:25,0:13:0.10:0,0,1	0/1:20,0:13:0.46:0,0,22	0/1:4,2:7:40.58:82,0,41	1/1:2,4:7:6.02:147,6,0	1/1:12,0:12:9.01:136,9,0	0/1:12,0:12:37.46:143,0,37	1/1:8,3:11:18.03:344,18,0	0/0:6,0:6:12.04:0,12,198	0/0:5,0:5:6.02:0,6,97	1/1:8,2:10:9.03:210,9,0	1/1:5,5:11:8.95:220,9,0	1/1:4,3:8:9.03:218,9,0	1/1:4,4:8:15.05:356,15,0	0/0:14,0:14:24.07:0,24,371	1/1:13,0:13:17.95:206,18,0	0/0:3,0:3:0.47:0,0,1	1/1:1,1:2:3.01:73,3,0	1/1:4,0:4:3.01:47,3,0	1/1:8,1:9:3.47:133,3,0	1/1:3,0:3:3.01:49,3,0	1/1:1,4:5:3.01:73,3,0	0/1:4,0:4:12.13:39,0,12	1/1:1,4:5:6.02:147,6,0	0/1:8,4:12:80.92:206,0,81	1/1:3,3:6:6.02:147,6,0	1/1:0,2:2:3.01:74,3,0
chr10	110429928	.	CT	C	21689.11	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=4.913;DP=743;FS=0.338;HRun=1;HaplotypeScore=83.6510;InbreedingCoeff=0.9966;MQ=82.93;MQ0=7;MQRankSum=-6.214;QD=37.85;ReadPosRankSum=5.547;VQSLOD=5.0349;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:99:1467,105,0	0/0:6,0:6:18.06:0,18,273	0/0:37,0:34:72.54:0,73,1215	0/0:49,0:41:98.50:0,99,1364	1/1:0,16:16:36.59:503,37,0	1/1:0,22:22:60.20:839,60,0	1/1:0,27:25:63.21:881,63,0	1/1:3,23:23:69.20:929,69,0	1/1:0,35:35:90.30:1259,90,0	0/0:33,0:33:99:0,99,1576	0/0:11,0:11:33.11:0,33,518	1/1:0,35:35:99:1468,105,0	1/1:0,34:34:90.15:1257,90,0	1/1:3,18:21:60.17:803,60,0	1/1:0,26:26:75.25:1048,75,0	0/0:34,0:34:99:0,102,1616	1/1:0,27:25:66.22:923,66,0	1/1:1,17:17:51.17:709,51,0	1/1:0,21:21:63.18:855,63,0	1/1:0,14:14:39.13:543,39,0	1/1:1,48:48:99:1886,135,0	1/1:0,22:22:66.22:923,66,0	1/1:0,13:13:39.13:542,39,0	1/1:0,40:40:99:1510,108,0	1/1:1,19:19:51.17:713,51,0	1/1:1,32:33:45.33:1206,45,0	1/1:0,29:29:84.28:1171,84,0	1/1:0,7:7:18.06:252,18,0
chr10	110434076	.	AGTGTGTGTGTGT	A	4682.87	PASS	AB=0.761;AC=17;AF=0.315;AN=54;BaseQRankSum=8.204;DP=692;FS=6.999;HRun=0;HaplotypeScore=224.7467;InbreedingCoeff=0.7329;MQ=67.74;MQ0=9;MQRankSum=-8.253;QD=18.44;ReadPosRankSum=1.071;VQSLOD=2.6986;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:40,3:45:23.61:689,24,0	0/0:4,0:4:6.02:0,6,267	./.	0/0:35,0:25:3.01:0,3,44	0/0:18,0:23:21.07:0,21,464	0/0:13,0:18:24.98:0,25,439	0/0:21,0:27:37.02:0,37,629	0/0:27,0:27:0:0,0,0	1/1:16,11:28:27.09:891,27,0	0/0:21,0:21:33.11:0,33,1733	0/0:4,0:6:12.04:0,12,629	0/0:26,0:26:48.16:0,48,2176	0/0:18,0:27:15.05:0,15,785	0/0:21,0:21:42.14:0,42,1833	0/0:29,0:32:66.21:0,66,2910	0/0:27,0:26:36.12:0,36,1854	1/1:25,2:27:8.75:290,9,0	1/1:13,3:17:7.67:277,8,0	0/0:6,0:6:1.25:0,1,3	1/1:17,5:23:15.05:497,15,0	1/1:38,0:37:3.01:39,3,0	0/0:22,0:22:36.11:0,36,1715	0/0:19,0:19:48.16:0,48,2115	0/0:40,0:42:60.66:0,61,2719	0/0:10,0:21:24.08:0,24,426	0/1:24,11:35:14.86:1000,0,15	1/1:17,9:26:29.13:897,29,0	1/1:10,1:10:3.01:103,3,0
chr10	110434838	.	C	CT	15184.95	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-10.835;DP=558;FS=17.731;HRun=6;HaplotypeScore=49.9318;InbreedingCoeff=0.9891;MQ=70.41;MQ0=0;MQRankSum=-2.324;QD=32.59;ReadPosRankSum=1.760;VQSLOD=3.1501;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,33:36:96.31:1208,96,0	0/0:5,0:5:15.03:0,15,153	0/0:15,0:15:30.21:0,30,342	0/0:11,0:11:18.04:0,18,183	1/1:0,17:17:48.15:603,48,0	1/1:1,9:10:18.06:226,18,0	1/1:1,15:16:39.12:491,39,0	1/1:4,36:39:99:1333,108,0	1/1:0,15:15:42.13:528,42,0	0/0:26,0:26:69.15:0,69,704	0/0:8,0:8:21.04:0,21,214	1/1:6,20:27:60.19:749,60,0	1/1:0,25:25:60.19:755,60,0	1/1:0,15:15:39.12:491,39,0	1/1:2,26:28:60.19:755,60,0	0/0:27,0:27:75.17:0,75,765	1/1:1,27:28:72.23:906,72,0	1/1:0,16:16:48.15:604,48,0	1/1:0,10:10:30.10:376,30,0	1/1:0,19:19:57.18:717,57,0	1/1:0,27:27:78.25:981,78,0	1/1:1,12:13:36.12:453,36,0	1/1:1,14:15:32.92:397,33,0	1/1:0,22:22:66.21:830,66,0	1/1:0,18:18:48.15:604,48,0	1/1:3,30:33:62.68:1101,63,0	1/1:5,25:28:72.21:889,72,0	1/1:1,5:6:15.05:189,15,0
chr10	110435436	.	C	CT	6000.22	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-6.816;DP=729;FS=2.335;HRun=7;HaplotypeScore=95.6624;InbreedingCoeff=1.0000;MQ=81.25;MQ0=0;MQRankSum=-3.259;QD=29.13;ReadPosRankSum=2.091;VQSLOD=5.0265;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,99,944	0/0:17,0:17:42.05:0,42,406	0/0:33,0:32:69.09:0,69,660	0/0:20,0:20:41.87:0,42,373	0/0:23,0:23:60.08:0,60,579	0/0:27,0:27:60.02:0,60,570	0/0:26,0:26:69.10:0,69,666	0/0:26,0:26:72.11:0,72,691	0/0:19,0:19:54.09:0,54,522	0/0:22,0:22:51.08:0,51,492	0/0:19,0:19:51.06:0,51,486	1/1:3,35:38:90.26:1076,90,0	1/1:6,15:21:55.03:633,55,0	1/1:3,37:40:99:1227,102,0	1/1:1,33:34:90.25:1087,90,0	0/0:22,0:22:60.09:0,60,579	0/0:36,0:36:99:0,105,1014	0/0:18,0:18:48.08:0,48,464	0/0:21,0:21:48.07:0,48,464	0/0:30,0:30:69.08:0,69,660	0/0:22,0:22:63.10:0,63,608	1/1:1,30:31:74.94:791,75,0	1/1:3,20:23:51.15:606,51,0	1/1:1,18:19:48.15:580,48,0	0/0:23,0:23:66.10:0,66,637	0/0:25,0:25:57.08:0,57,550	0/0:34,0:33:84.13:0,84,811	0/0:18,0:18:54.09:0,54,521
chr10	110437293	.	ATTTT	A	7125.72	PASS	AB=0.579;AC=28;AF=0.500;AN=56;BaseQRankSum=1.524;DP=494;FS=2.417;HRun=14;HaplotypeScore=86.1416;InbreedingCoeff=0.8404;MQ=59.50;MQ0=8;MQRankSum=-3.823;QD=24.66;ReadPosRankSum=6.044;VQSLOD=3.9373;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:6,23:28:13.07:576,0,13	0/0:7,0:8:23.91:0,24,457	0/0:11,0:9:17.55:0,18,284	0/0:6,0:5:9.03:0,9,125	1/1:3,23:27:58.32:785,58,0	1/1:2,14:16:36.10:509,36,0	1/1:3,10:13:18.02:249,18,0	1/1:5,21:26:57.11:791,57,0	1/1:3,11:14:27.02:382,27,0	0/0:14,0:17:42.14:0,42,876	0/0:14,0:14:42.13:0,42,877	0/0:5,0:14:21.07:0,21,384	0/0:5,0:15:30.10:0,30,549	0/0:4,0:13:21.07:0,21,342	0/0:7,0:13:30.07:0,30,520	0/0:21,0:21:57.18:0,57,1171	1/1:7,23:27:57.14:807,57,0	1/1:4,16:18:34.35:466,34,0	1/1:7,10:16:23.96:320,24,0	1/1:1,12:13:24:328,24,0	1/1:2,11:13:24.05:325,24,0	0/0:13,0:22:38.63:0,39,656	0/0:6,0:17:39.13:0,39,728	0/0:14,0:25:56.96:0,57,1133	1/1:3,12:16:27.05:363,27,0	0/1:8,15:24:18.77:588,0,19	1/1:3,19:21:36.10:509,36,0	1/1:2,4:6:9.02:127,9,0
chr10	110438080	.	GA	G	7086.02	PASS	AB=0.581;AC=29;AF=0.518;AN=56;BaseQRankSum=-3.989;DP=622;FS=0.000;HRun=11;HaplotypeScore=83.9917;InbreedingCoeff=0.9042;MQ=72.88;MQ0=0;MQRankSum=1.002;QD=18.90;ReadPosRankSum=3.623;VQSLOD=5.5757;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:31:71.91:591,72,0	0/0:9,1:11:8.26:0,8,270	0/0:9,0:9:7.72:0,8,66	0/0:15,0:15:16.80:0,17,154	1/1:2,29:31:80.87:665,81,0	1/1:6,32:39:30.94:656,31,0	1/1:3,17:20:50.94:419,51,0	1/1:5,24:30:64.50:505,65,0	1/1:7,16:24:29.32:305,29,0	0/0:30,0:30:72.18:0,72,762	0/0:20,0:20:42.10:0,42,442	0/0:15,0:19:38.65:0,39,250	0/0:5,0:19:37.67:0,38,242	0/0:6,0:18:23.22:0,23,160	0/0:10,0:21:43.78:0,44,270	0/0:22,0:22:14.29:0,14,538	1/1:3,20:23:24.93:411,25,0	1/1:2,15:17:44.93:369,45,0	0/1:5,13:18:21.63:253,0,22	1/1:4,29:33:77.87:640,78,0	1/1:2,18:20:53.90:437,54,0	0/0:9,0:22:49.27:0,49,333	0/0:5,0:28:36.63:0,37,187	0/0:2,0:12:25.73:0,26,146	1/1:1,14:15:35.96:296,36,0	1/1:3,18:23:58:455,58,0	1/1:3,33:36:89.48:738,89,0	1/1:1,14:15:41.94:345,42,0
chr10	110439214	.	C	CT	5910	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-6.613;DP=595;FS=0.365;HRun=1;HaplotypeScore=105.8767;InbreedingCoeff=0.9804;MQ=91.27;MQ0=0;MQRankSum=-3.531;QD=39.66;ReadPosRankSum=1.445;VQSLOD=4.8597;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,99,1249	0/0:2,0:2:6.02:0,6,78	0/0:30,0:30:84.26:0,84,1043	0/0:21,0:21:57.18:0,57,733	0/0:20,0:20:60.20:0,60,779	0/0:13,0:13:36.12:0,36,467	0/0:21,0:21:60.19:0,60,777	0/0:33,0:33:96.27:0,96,1227	0/0:26,0:26:72.22:0,72,918	0/0:11,0:11:33.11:0,33,428	0/0:10,0:10:27.09:0,27,350	1/1:1,27:27:81.24:1189,81,0	1/1:0,23:23:63.05:943,63,0	1/1:3,23:26:75.22:1097,75,0	1/1:8,18:26:66.17:943,66,0	0/0:18,0:18:48.16:0,48,623	0/0:29,0:29:78.25:0,78,1013	0/0:26,0:26:75.24:0,75,974	0/0:21,0:21:63.20:0,63,818	0/0:15,0:15:39.13:0,39,506	0/0:34,0:34:93.30:0,93,1207	1/1:0,10:10:29.97:374,30,0	1/1:1,13:14:42.10:604,42,0	1/1:4,18:22:54.10:759,54,0	0/0:9,0:9:27.08:0,27,337	0/0:24,0:24:72.23:0,72,935	0/0:28,0:28:78.25:0,78,1011	0/0:10,0:9:27.09:0,27,350
chr10	110439274	.	C	CCT	18180.22	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=4.523;DP=460;FS=0.000;HRun=0;HaplotypeScore=66.8427;InbreedingCoeff=0.9764;MQ=73.81;MQ0=0;MQRankSum=-5.205;QD=48.22;ReadPosRankSum=5.077;VQSLOD=5.8360;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:41:90.14:1739,90,0	0/0:2,0:2:6.02:0,6,98	0/0:17,0:17:51.17:0,51,818	0/0:20,0:20:57.08:0,57,791	1/1:0,18:19:42.06:808,42,0	1/1:1,15:16:39.13:790,39,0	1/1:1,9:11:27.09:548,27,0	1/1:2,16:18:54.15:1052,54,0	1/1:0,14:14:33.11:670,33,0	0/0:18,0:18:54.18:0,54,860	0/0:9,0:9:27.08:0,27,416	1/1:2,13:15:36.11:689,36,0	1/1:3,11:16:39.08:714,39,0	1/1:2,21:23:66.21:1281,66,0	1/1:2,15:16:45.07:834,45,0	0/0:17,0:17:51.14:0,51,762	1/1:0,15:17:36.12:730,36,0	1/1:0,24:24:54.13:1054,54,0	1/1:1,11:13:39.11:722,39,0	1/1:0,12:12:36.06:687,36,0	1/1:0,25:25:72.25:1457,72,0	1/1:2,7:10:27.01:502,27,0	1/1:4,12:16:39.08:710,39,0	1/1:2,18:20:36.06:728,36,0	1/1:0,9:9:21.07:426,21,0	1/1:1,11:12:36.12:706,36,0	1/1:1,16:18:42.14:845,42,0	1/1:2,9:10:24.08:487,24,0
chr10	110439402	.	T	TA	5304.56	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-2.336;DP=233;FS=7.041;HRun=5;HaplotypeScore=44.6440;InbreedingCoeff=0.8280;MQ=56.67;MQ0=1;MQRankSum=-4.848;QD=33.15;ReadPosRankSum=-1.378;VQSLOD=4.5605;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:5.38:51,5,0	0/0:5,0:5:12.48:0,12,134	0/0:5,0:3:9.03:0,9,112	0/0:5,0:4:9.89:0,10,98	1/1:4,9:13:36.08:491,36,0	1/1:0,11:11:33.06:400,33,0	1/1:2,3:5:12.04:169,12,0	1/1:8,24:26:75.24:1028,75,0	1/1:0,6:6:18.06:257,18,0	0/0:5,0:4:12.04:0,12,149	0/0:7,0:7:15.05:0,15,186	0/0:6,0:12:26.81:0,27,255	0/0:5,0:5:12.04:0,12,149	0/0:6,0:8:23.94:0,24,258	0/0:7,0:11:29.82:0,30,295	0/0:2,0:2:3.01:0,3,37	1/1:6,13:18:46.60:566,47,0	1/1:3,11:14:2.68:386,3,0	1/1:1,11:12:28.87:352,29,0	1/1:1,5:6:18.06:255,18,0	1/1:0,2:2:6.02:85,6,0	0/0:2,0:2:3.01:0,3,37	0/0:3,0:3:6.02:0,6,74	0/0:2,0:2:6.02:0,6,68	1/1:1,10:11:33.07:414,33,0	1/1:1,6:7:18.06:255,18,0	1/1:2,8:10:24.08:341,24,0	1/1:3,6:9:16.47:253,16,0
chr10	110439427	.	AAT	A	2384.39	PASS	AB=0.827;AC=23;AF=0.411;AN=56;BaseQRankSum=9.245;DP=207;FS=0.624;HRun=0;HaplotypeScore=64.5046;InbreedingCoeff=0.1707;MQ=48.58;MQ0=3;MQRankSum=-5.632;QD=16.67;ReadPosRankSum=4.140;VQSLOD=3.5694;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,1:2:5.97:63,6,0	0/0:4,0:4:12.04:0,12,197	0/0:6,0:1:2.98:0,3,22	0/0:2,0:2:5.38:0,5,50	0/1:3,5:8:76.50:193,0,77	0/1:9,2:11:97:97,0,179	0/1:3,1:2:20.31:38,0,20	0/1:23,2:16:53.50:54,0,533	0/1:1,4:5:40.41:159,0,40	0/0:10,0:10:30.10:0,30,479	0/0:8,0:8:24.08:0,24,365	0/0:13,0:13:4.70:0,5,225	0/0:3,0:3:9.03:0,9,121	0/0:5,0:5:2.49:0,2,110	0/1:5,0:4:10.47:10,0,31	0/0:2,0:2:6.02:0,6,99	0/1:16,0:14:99:131,0,268	0/1:12,1:13:99:116,0,276	1/1:2,10:11:28.77:376,29,0	1/1:0,6:6:17.97:225,18,0	1/1:0,2:2:6.02:83,6,0	0/0:3,0:3:9.03:0,9,126	0/0:6,0:6:18.06:0,18,251	0/0:2,0:2:2.08:0,2,41	0/1:7,3:10:68.59:120,0,69	1/1:1,5:6:14.54:200,15,0	1/1:1,5:6:18.06:251,18,0	1/1:2,10:11:31.92:450,32,0
chr10	110439429	.	T	TAA	3546.66	PASS	AB=0.835;AC=24;AF=0.429;AN=56;BaseQRankSum=11.034;DP=225;FS=0.000;HRun=3;HaplotypeScore=70.2502;InbreedingCoeff=0.3197;MQ=47.73;MQ0=3;MQRankSum=-7.719;QD=23.18;ReadPosRankSum=2.051;VQSLOD=1.8041;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:6.02:87,6,0	0/0:4,0:4:12.04:0,12,166	0/0:5,0:1:2.98:0,3,22	0/1:2,0:2:4.53:5,0,36	0/1:10,1:11:49.60:225,0,50	0/1:7,4:11:98.23:252,0,98	1/1:5,0:3:5.04:82,5,0	0/1:24,3:18:99:115,0,364	0/1:8,0:8:20.66:184,0,21	0/0:11,0:11:30.10:0,30,419	0/0:8,0:8:21.07:0,21,294	0/0:13,0:13:26.92:0,27,285	0/0:5,0:5:12.03:0,12,146	0/0:5,0:5:14.96:0,15,159	0/0:6,0:5:17.87:0,18,146	0/0:2,0:2:6.02:0,6,84	0/1:9,8:15:99:327,0,120	0/1:7,6:13:99:306,0,129	1/1:12,1:12:36.08:509,36,0	1/1:6,0:6:17.97:221,18,0	1/1:3,0:3:6.02:83,6,0	0/0:3,0:3:9.03:0,9,126	0/0:7,0:7:18.06:0,18,251	0/0:3,0:3:9.02:0,9,102	0/1:7,3:10:13.34:257,0,13	1/1:5,0:5:15.02:191,15,0	1/1:6,1:7:18.05:237,18,0	1/1:11,1:12:33.10:466,33,0
chr10	110439436	.	AT	A	3523.86	PASS	AB=0.629;AC=23;AF=0.411;AN=56;BaseQRankSum=10.469;DP=247;FS=2.065;HRun=1;HaplotypeScore=72.7206;InbreedingCoeff=0.4165;MQ=49.34;MQ0=3;MQRankSum=-8.450;QD=21.62;ReadPosRankSum=2.759;VQSLOD=3.9708;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,1:2:6.01:66,6,0	0/0:3,0:3:9.03:0,9,134	0/0:5,0:2:6.02:0,6,84	0/0:4,0:4:10.27:0,10,118	0/1:3,10:13:28.02:296,0,28	0/1:5,6:11:99:157,0,123	1/1:1,2:2:6.02:75,6,0	0/1:19,7:17:99:176,0,210	0/1:2,9:11:4.29:333,0,4	0/0:12,0:12:36.08:0,36,497	0/0:10,0:10:27.08:0,27,369	0/0:13,0:13:19.95:0,20,255	0/0:5,0:5:15.04:0,15,193	0/0:5,0:5:9.96:0,10,109	0/0:8,0:7:13.91:0,14,153	0/0:4,0:4:12.03:0,12,155	0/1:6,11:15:27.41:271,0,27	0/1:6,8:14:98.10:198,0,98	1/1:1,13:13:39.11:465,39,0	1/1:2,9:11:29.76:278,30,0	1/1:1,3:4:11.90:116,12,0	0/0:4,0:4:12.04:0,12,168	0/0:7,0:7:21.07:0,21,293	0/0:4,0:4:10.28:0,10,128	0/1:4,7:11:15.74:226,0,16	1/1:1,5:6:17.96:188,18,0	1/1:0,7:7:20.98:243,21,0	1/1:1,12:12:36.07:436,36,0
chr10	110439437	.	T	TAA	1320.32	PASS	AB=0.972;AC=27;AF=0.482;AN=56;BaseQRankSum=11.658;DP=257;FS=0.645;HRun=3;HaplotypeScore=87.7560;InbreedingCoeff=0.6512;MQ=49.35;MQ0=3;MQRankSum=-8.730;QD=7.77;ReadPosRankSum=1.700;VQSLOD=0.3736;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,1:3:5.59:34,6,0	0/0:3,0:3:9.03:0,9,126	0/0:5,0:2:6.02:0,6,84	0/0:4,0:4:1.49:0,1,114	1/1:14,0:14:4.11:113,4,0	0/1:11,0:11:66:128,0,66	1/1:4,0:3:3.07:11,3,0	0/1:24,0:17:28.66:29,0,87	1/1:12,0:12:18.10:77,18,0	0/0:12,0:12:36.08:0,36,481	0/0:11,0:11:27.08:0,27,361	0/0:13,0:13:29.96:0,30,335	0/0:6,0:6:12.04:0,12,168	0/0:5,0:5:14.96:0,15,149	0/0:8,0:7:23.92:0,24,233	0/0:4,0:4:12.03:0,12,151	1/1:16,2:16:28.68:245,29,0	1/1:12,2:14:26.23:239,26,0	1/1:16,0:15:25.41:103,25,0	1/1:11,0:11:25.22:137,25,0	1/1:4,0:4:10.96:69,11,0	0/0:5,0:5:12.04:0,12,168	0/0:7,0:7:21.07:0,21,294	0/0:4,0:4:10.28:0,10,128	0/1:10,0:11:8.11:133,0,8	1/1:8,0:8:15.56:70,16,0	1/1:7,0:7:13.72:40,14,0	1/1:13,0:12:26.96:97,27,0
chr10	110439441	.	T	TAAAAAAA	8770.32	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=9.691;DP=282;FS=9.649;HRun=3;HaplotypeScore=101.1231;InbreedingCoeff=0.9546;MQ=53.10;MQ0=2;MQRankSum=-10.270;QD=47.41;ReadPosRankSum=0.578;VQSLOD=1.1218;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,1:3:9.02:168,9,0	0/0:3,0:3:9.03:0,9,211	0/0:8,0:5:15.02:0,15,223	0/0:6,0:6:11.95:0,12,220	1/1:17,0:17:45.09:771,45,0	1/1:9,0:11:30.10:854,30,0	1/1:6,0:5:11.99:162,12,0	1/1:23,0:18:42.11:810,42,0	1/1:12,0:12:36.11:628,36,0	0/0:12,0:12:36.12:0,36,763	0/0:11,0:11:30.09:0,30,599	0/0:14,0:14:33.10:0,33,638	0/0:5,0:5:12.04:0,12,250	0/0:5,0:5:15.05:0,15,287	0/0:10,0:9:30.07:0,30,495	0/0:4,0:4:12.04:0,12,238	1/1:16,2:16:39.54:835,40,0	1/1:10,2:12:33.07:857,33,0	1/1:20,0:19:51.07:808,51,0	1/1:15,0:15:42.09:548,42,0	1/1:6,0:6:18.01:245,18,0	0/0:6,0:6:18.03:0,18,300	0/0:9,0:9:24.07:0,24,462	0/0:4,0:4:12.02:0,12,209	1/1:12,0:13:36.10:832,36,0	1/1:8,0:8:24.02:356,24,0	1/1:8,0:8:21.03:285,21,0	1/1:13,0:12:36.11:613,36,0
chr10	110439492	.	G	GAC	10485.26	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=13.987;DP=461;FS=27.700;HRun=0;HaplotypeScore=105.2348;InbreedingCoeff=0.9560;MQ=74.59;MQ0=0;MQRankSum=-4.549;QD=37.18;ReadPosRankSum=-2.561;VQSLOD=3.3801;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:18:45.15:750,45,0	0/0:4,0:4:12.04:0,12,153	0/0:9,0:8:14.40:0,14,155	0/0:20,0:20:32.59:0,33,410	1/1:4,24:28:63.22:1052,63,0	1/1:2,7:9:24.05:372,24,0	1/1:5,9:15:30.10:493,30,0	1/1:6,18:23:51.09:778,51,0	1/1:3,18:21:54.18:902,54,0	0/0:12,0:12:33.11:0,33,420	0/0:15,0:15:42.13:0,42,535	0/0:24,0:24:60.19:0,60,764	0/0:8,0:8:21.07:0,21,267	0/0:17,0:17:45.14:0,45,573	0/0:13,0:13:36.12:0,36,458	0/0:13,0:13:36.11:0,36,458	1/1:7,18:26:51.17:852,51,0	1/1:2,18:20:54.18:903,54,0	1/1:10,10:19:0.90:508,1,0	1/1:3,17:21:42.14:702,42,0	1/1:2,19:21:54.18:903,54,0	0/0:15,0:15:45.14:0,45,573	0/0:15,0:15:45.13:0,45,559	0/0:14,0:14:39.12:0,39,497	1/1:1,8:9:21.07:351,21,0	1/1:1,16:17:12.97:764,13,0	1/1:7,12:19:45.05:687,45,0	1/1:4,10:13:30.03:469,30,0
chr10	110440691	.	GA	G	994.84	PASS	AB=0.977;AC=10;AF=0.179;AN=56;BaseQRankSum=0.979;DP=575;FS=2.257;HRun=12;HaplotypeScore=84.6982;InbreedingCoeff=0.7367;MQ=73.85;MQ0=3;MQRankSum=-0.787;QD=10.36;ReadPosRankSum=3.615;VQSLOD=3.4639;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,2:46:64.22:0,64,952	0/1:5,0:5:11.15:11,0,79	0/0:28,0:25:32.26:0,32,225	0/1:20,1:13:22.87:23,0,108	1/1:7,21:29:31.32:416,31,0	1/1:2,15:17:20.37:340,20,0	1/1:4,13:17:29.85:232,30,0	0/0:20,2:24:10.30:0,10,432	0/0:20,1:21:24.78:0,25,400	0/0:21,0:23:62.91:0,63,608	0/0:12,1:15:18.63:0,19,335	0/0:15,0:15:32.90:0,33,283	0/0:24,0:24:32.77:0,33,443	0/0:21,0:21:28.59:0,29,345	0/0:22,0:22:39.69:0,40,425	0/0:21,0:27:63.32:0,63,559	0/0:17,1:19:33.50:0,34,469	0/0:23,1:24:24.79:0,25,401	0/0:17,1:19:10.87:0,11,368	0/0:17,0:21:44.89:0,45,429	0/0:14,1:15:12.83:0,13,295	0/0:15,0:15:38.93:0,39,361	0/0:17,0:17:38.61:0,39,289	0/0:19,0:19:36.56:0,37,454	1/1:0,7:7:17.93:139,18,0	0/0:14,0:16:41.91:0,42,404	0/0:29,0:29:75.61:0,76,755	0/0:18,0:19:38.55:0,39,368
chr10	110441048	.	TA	T	1933.55	PASS	AC=8;AF=0.190;AN=42;BaseQRankSum=8.833;DP=529;FS=4.699;HRun=10;HaplotypeScore=75.1839;InbreedingCoeff=0.9941;MQ=83.01;MQ0=0;MQRankSum=-1.129;QD=20.79;ReadPosRankSum=1.060;VQSLOD=4.7207;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,1:35:61.19:0,61,903	0/0:7,0:7:18.05:0,18,199	0/0:21,1:23:18.60:0,19,357	0/0:15,0:15:35.97:0,36,365	1/1:2,26:28:74.98:651,75,0	1/1:4,22:26:65.98:573,66,0	1/1:2,25:27:68.97:599,69,0	0/0:36,0:36:84.22:0,84,923	0/0:22,0:22:60.12:0,60,637	0/0:50,0:50:99:0,141,1516	0/0:16,1:18:24.99:0,25,486	./.	./.	./.	./.	0/0:37,1:39:79.04:0,79,1070	0/0:28,0:28:78.21:0,78,862	0/0:23,0:23:63:0,63,678	0/0:23,0:25:52.95:0,53,605	0/0:11,0:11:30.07:0,30,325	0/0:14,0:14:33.07:0,33,354	./.	./.	./.	1/1:1,11:12:29.99:260,30,0	0/0:35,0:35:93.24:0,93,1015	0/0:33,0:33:81.16:0,81,866	0/0:19,2:21:25.07:0,25,497
chr10	110442230	.	GGGGGGGT	G	3584.62	PASS	AB=1.000;AC=27;AF=0.711;AN=38;BaseQRankSum=-0.960;DP=189;FS=0.000;HRun=0;HaplotypeScore=58.6153;InbreedingCoeff=0.4922;MQ=79.41;MQ0=10;MQRankSum=-3.916;QD=23.28;ReadPosRankSum=4.617;VQSLOD=2.3154;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,12:14:12.04:289,12,0	./.	0/0:22,0:13:22.74:0,23,436	0/1:18,0:4:0:0,0,0	0/1:5,0:5:0:0,0,0	0/0:5,0:4:2.21:0,2,14	0/1:11,0:11:28.18:28,0,116	1/1:9,1:9:9:80,9,0	1/1:3,7:9:15.05:362,15,0	0/1:5,0:5:0:0,0,0	0/1:3,0:3:0:0,0,0	./.	./.	./.	./.	0/0:5,0:3:2.51:0,3,19	1/1:4,7:11:18.06:434,18,0	1/1:1,8:9:15.05:362,15,0	1/1:2,6:8:14.84:302,15,0	1/1:0,3:3:8.98:164,9,0	1/1:3,8:11:2.70:20,3,0	./.	./.	./.	./.	1/1:3,9:12:24.01:386,24,0	1/1:1,18:18:42.14:1013,42,0	1/1:1,3:4:6.02:145,6,0
chr10	110442236	.	GT	G	1540.05	PASS	AB=1.000;AC=29;AF=0.853;AN=34;BaseQRankSum=-1.594;DP=178;FS=6.926;HRun=1;HaplotypeScore=43.8596;InbreedingCoeff=0.4034;MQ=68.28;MQ0=18;MQRankSum=-3.695;QD=10.85;ReadPosRankSum=1.077;VQSLOD=1.4318;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:11:11.95:93,12,0	./.	0/1:20,0:10:1.41:1,0,119	0/0:18,0:2:0:0,0,0	./.	1/1:6,0:5:9.83:70,10,0	1/1:11,1:12:28.75:190,29,0	1/1:6,0:5:9.01:82,9,0	1/1:9,0:8:14.94:116,15,0	./.	0/0:2,1:3:0.47:0,0,1	./.	./.	./.	./.	1/1:6,0:3:7.18:44,7,0	1/1:9,0:7:17.93:140,18,0	1/1:10,0:8:14.94:117,15,0	1/1:6,0:6:14.76:107,15,0	1/1:4,0:4:11.89:84,12,0	1/1:9,0:8:2.75:20,3,0	./.	./.	./.	./.	1/1:9,0:9:23.93:190,24,0	1/1:19,0:18:41.84:326,42,0	1/1:4,0:3:5.98:47,6,0
chr10	110442514	.	T	TAC	131.43	PASS	AB=0.759;AC=1;AF=0.024;AN=42;BaseQRankSum=4.790;DP=377;FS=3.240;HRun=0;HaplotypeScore=73.0917;InbreedingCoeff=-0.0298;MQ=86.41;MQ0=0;MQRankSum=4.735;QD=5.97;ReadPosRankSum=-2.230;VQSLOD=2.0386;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.32:0,93,1423	0/0:2,0:2:6.02:0,6,92	0/1:14,7:22:99:205,0,249	0/0:17,0:16:35.95:0,36,513	0/0:21,0:21:63.21:0,63,964	0/0:21,0:21:54.18:0,54,823	0/0:16,0:16:48.16:0,48,735	0/0:25,0:25:66.22:0,66,1011	0/0:7,0:7:18.06:0,18,276	0/0:13,0:13:39.09:0,39,571	0/0:11,0:11:33.10:0,33,485	./.	./.	./.	./.	0/0:13,0:12:36.12:0,36,548	0/0:33,0:33:96.33:0,96,1470	0/0:16,0:16:48.14:0,48,711	0/0:16,0:16:48.16:0,48,735	0/0:12,0:12:36.11:0,36,529	0/0:17,0:17:51.14:0,51,735	./.	./.	./.	0/0:19,0:19:57.18:0,57,853	0/0:24,0:24:72.24:0,72,1084	0/0:22,0:22:63.17:0,63,937	0/0:19,0:19:57.19:0,57,867
chr10	110443246	.	A	AC	4259	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-6.164;DP=567;FS=16.837;HRun=1;HaplotypeScore=64.6662;InbreedingCoeff=0.6993;MQ=74.23;MQ0=1;MQRankSum=-1.956;QD=28.39;ReadPosRankSum=0.816;VQSLOD=3.3022;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,172,2190	0/0:10,0:10:30.10:0,30,389	0/0:22,0:21:60.18:0,60,744	0/0:20,0:15:35.87:0,36,375	1/1:0,25:25:69.15:1000,69,0	1/1:0,19:19:54.18:808,54,0	1/1:0,31:30:69.23:1034,69,0	0/0:34,0:34:84.27:0,84,1079	0/0:16,0:16:45.13:0,45,556	0/0:24,0:24:72.21:0,72,900	0/0:16,0:16:48.13:0,48,607	1/1:6,0:6:7.09:31,7,0	1/1:3,0:3:3.62:25,4,0	1/1:10,0:10:12.38:46,12,0	0/1:6,0:6:17.31:17,0,41	0/0:32,0:32:90.26:0,90,1138	0/0:37,0:37:99:0,111,1408	0/0:28,0:28:84.25:0,84,1074	0/0:16,0:16:48.12:0,48,574	0/0:25,0:25:75.24:0,75,973	0/0:15,0:15:42.14:0,42,545	0/1:10,0:9:17.88:48,0,18	0/1:8,0:7:16.12:16,0,57	1/1:5,0:5:5.26:21,5,0	1/1:0,27:27:81.27:1213,81,0	0/0:20,0:20:54.17:0,54,689	0/0:36,0:36:99:0,108,1368	0/0:8,0:8:24.08:0,24,311
chr10	110443248	.	A	AG	1216.57	PASS	AB=0.615;AC=13;AF=0.232;AN=56;BaseQRankSum=9.796;DP=573;FS=86.761;HRun=0;HaplotypeScore=75.3930;InbreedingCoeff=0.9026;MQ=73.15;MQ0=1;MQRankSum=-8.840;QD=22.95;ReadPosRankSum=-0.390;VQSLOD=-0.4755;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,172,2348	0/0:10,0:10:30.10:0,30,419	0/0:24,0:21:63.18:0,63,807	0/0:19,0:14:37.95:0,38,424	0/0:25,0:25:8.58:0,9,79	0/0:20,0:20:21.87:0,22,76	0/0:30,0:29:44.12:0,44,135	0/0:33,0:33:87.29:0,87,1213	0/0:16,0:16:48.16:0,48,661	0/0:25,0:25:69.22:0,69,948	0/0:18,0:18:48.16:0,48,671	1/1:1,6:7:15.05:222,15,0	1/1:2,3:5:12.04:164,12,0	1/1:0,11:11:15.05:230,15,0	1/1:3,3:6:11.92:155,12,0	0/0:32,0:32:96.31:0,96,1323	0/0:36,0:36:99:0,108,1472	0/0:28,0:28:84.28:0,84,1175	0/0:14,0:14:42.14:0,42,584	0/0:25,0:25:75.25:0,75,1049	0/0:16,0:16:45.15:0,45,628	1/1:2,8:9:26.87:354,27,0	0/1:3,4:7:1.05:164,0,1	1/1:1,5:6:8.94:110,9,0	0/0:27,0:27:49.29:0,49,161	0/0:20,0:20:57.18:0,57,782	0/0:35,0:35:99:0,105,1469	0/0:9,0:9:27.07:0,27,360
chr10	110444256	.	TATATATATATATATATATATACACACAC	T	1065.42	PASS	AB=1.000;AC=13;AF=0.283;AN=46;BaseQRankSum=4.603;DP=140;FS=0.000;HRun=0;HaplotypeScore=78.4152;InbreedingCoeff=0.5434;MQ=63.15;MQ0=1;MQRankSum=-4.104;QD=23.16;ReadPosRankSum=2.870;VQSLOD=1.2854;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:19.93:0,20,1247	0/0:3,0:3:5.84:0,6,652	0/1:4,0:2:0:0,0,0	./.	./.	0/0:1,0:1:3.01:0,3,367	0/0:1,0:1:3.01:0,3,252	0/0:17,0:17:45.15:0,45,2034	0/0:3,0:3:3.01:0,3,284	./.	0/0:1,0:1:3.01:0,3,284	1/1:0,9:9:6.02:360,6,0	1/1:2,5:7:7.27:362,7,0	1/1:0,10:10:9.01:188,9,0	1/1:0,10:10:6.02:72,6,0	0/0:1,0:1:3.01:0,3,63	0/0:16,0:16:21.07:0,21,709	0/0:7,0:7:21.07:0,21,1255	0/0:1,0:1:3.01:0,3,248	./.	0/0:2,0:2:0.47:0,0,1	1/1:0,2:2:6.02:186,6,0	0/0:1,0:1:1.55:0,2,4	1/1:0,4:4:3.01:34,3,0	0/0:8,0:8:15.94:0,16,1563	./.	0/0:4,0:4:9.02:0,9,395	0/0:2,0:2:6.02:0,6,154
chr10	110444272	.	TATATAC	T	877.83	PASS	AB=0.928;AC=16;AF=0.400;AN=40;BaseQRankSum=-1.497;DP=140;FS=3.980;HRun=0;HaplotypeScore=50.1677;InbreedingCoeff=0.1002;MQ=52.71;MQ0=1;MQRankSum=0.400;QD=10.09;ReadPosRankSum=-2.281;VQSLOD=0.6333;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:55.75:72,0,56	0/0:3,0:3:6.02:0,6,192	./.	./.	0/0:3,0:3:0:0,0,0	0/0:1,0:1:3.01:0,3,74	0/0:1,0:1:3.01:0,3,71	0/1:23,0:23:81.45:358,0,81	1/1:4,0:4:2.84:14,3,0	./.	0/0:1,0:1:2.99:0,3,24	0/1:10,0:10:1.97:37,0,2	0/1:8,0:8:2.29:37,0,2	0/0:10,0:10:2.84:0,3,14	./.	1/1:1,0:1:0.47:1,0,0	0/1:4,13:17:6.93:231,0,7	1/1:7,0:7:13.97:110,14,0	1/1:2,0:1:2.98:21,3,0	./.	0/0:1,1:2:0:0,0,0	0/0:2,0:2:2.22:0,2,7	./.	./.	0/0:10,0:10:12.04:0,12,332	./.	0/1:3,0:3:12.05:46,0,12	1/1:1,0:1:3.01:67,3,0
chr10	110444276	.	TAC	T	904.18	PASS	AB=1.000;AC=22;AF=0.611;AN=36;BaseQRankSum=-0.067;DP=145;FS=3.392;HRun=0;HaplotypeScore=47.1525;InbreedingCoeff=0.4890;MQ=56.67;MQ0=2;MQRankSum=-0.535;QD=9.62;ReadPosRankSum=-2.699;VQSLOD=2.7316;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:17.84:131,18,0	0/0:3,0:3:6.01:0,6,76	./.	0/0:5,0:3:0.47:0,0,1	0/1:3,0:3:0:0,0,0	0/0:1,0:1:3.01:0,3,46	0/0:1,0:1:3:0,3,25	1/1:11,13:24:48.11:486,48,0	1/1:4,0:4:3:26,3,0	./.	0/0:1,0:1:2.99:0,3,24	1/1:9,0:10:2.84:14,3,0	1/1:6,0:8:2.71:14,3,0	./.	./.	./.	1/1:16,0:16:11.79:81,12,0	1/1:9,0:9:19.79:154,20,0	1/1:3,0:2:5.98:47,6,0	./.	0/1:2,0:2:0:0,0,0	./.	./.	./.	0/0:10,0:10:4.13:0,4,122	./.	1/1:3,0:3:5.99:48,6,0	1/1:1,0:1:2.97:20,3,0
chr10	110444307	.	CATATAT	C	527.32	PASS	AB=1.000;AC=13;AF=0.310;AN=42;BaseQRankSum=4.895;DP=148;FS=9.246;HRun=0;HaplotypeScore=55.7097;InbreedingCoeff=0.5399;MQ=65.62;MQ0=3;MQRankSum=-4.518;QD=15.07;ReadPosRankSum=-1.287;VQSLOD=0.7230;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:8:17.78:0,18,379	0/0:1,0:1:3.01:0,3,50	./.	0/0:17,0:7:2.84:0,3,10	0/0:0,0:4:0:0,0,0	./.	./.	0/0:21,0:22:42.97:0,43,755	0/0:4,0:4:3.01:0,3,101	./.	0/0:1,0:1:3.01:0,3,101	1/1:2,6:8:15.05:295,15,0	1/1:4,3:7:5.75:118,6,0	./.	1/1:3,1:4:6.02:103,6,0	./.	0/0:13,0:13:9.03:0,9,303	0/0:10,0:13:36.12:0,36,948	0/0:3,0:3:5.98:0,6,120	0/0:1,0:1:3.01:0,3,101	0/0:3,0:3:3.01:0,3,72	./.	1/1:0,2:2:2.88:58,3,0	0/1:3,0:3:0:0,0,0	1/1:4,0:10:8.23:80,8,0	1/1:1,0:1:0.47:1,0,0	0/0:2,0:3:9.03:0,9,241	0/0:4,0:4:12.04:0,12,374
chr10	110444329	.	CAT	C	252.87	PASS	AB=0.938;AC=12;AF=0.261;AN=46;BaseQRankSum=4.202;DP=152;FS=1.279;HRun=0;HaplotypeScore=42.5365;InbreedingCoeff=0.3916;MQ=62.76;MQ0=2;MQRankSum=-4.202;QD=6.32;ReadPosRankSum=1.993;VQSLOD=2.6412;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:17.07:17,0,187	./.	0/0:4,0:1:0:0,0,0	0/0:11,0:5:3.01:0,3,36	0/0:8,0:8:3.01:0,3,46	0/0:5,0:5:6.02:0,6,93	./.	0/0:18,0:18:41.34:0,41,591	0/0:3,0:3:3.01:0,3,50	0/0:1,0:1:3.01:0,3,48	0/0:2,0:2:6.02:0,6,89	1/1:1,6:7:15.04:162,15,0	1/1:2,4:6:5.88:64,6,0	./.	1/1:1,1:2:5.95:50,6,0	0/0:1,0:1:3.01:0,3,47	0/0:13,0:13:18.06:0,18,274	0/0:17,0:17:44.49:0,44,580	0/0:1,0:1:3.01:0,3,50	0/0:3,0:3:9.03:0,9,140	0/0:4,0:4:6.02:0,6,96	1/1:3,0:3:3.01:37,3,0	1/1:0,3:3:2.87:32,3,0	./.	0/1:6,1:7:8.80:27,0,9	./.	0/0:4,0:4:11.83:0,12,157	0/0:9,0:8:24.08:0,24,379
chr10	110446486	.	A	AT	6727.54	PASS	AB=0.591;AC=42;AF=0.750;AN=56;BaseQRankSum=-6.226;DP=523;FS=9.294;HRun=12;HaplotypeScore=61.0039;InbreedingCoeff=0.7164;MQ=67.35;MQ0=1;MQRankSum=-1.405;QD=15.94;ReadPosRankSum=1.987;VQSLOD=5.7244;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:33:41.10:542,41,0	0/0:8,0:9:19.92:0,20,137	0/0:19,0:10:3.17:0,3,51	0/0:10,0:6:5.53:0,6,43	1/1:4,20:25:47.85:441,48,0	1/1:7,26:33:60.10:584,60,0	1/1:4,5:10:17.86:160,18,0	0/1:12,14:27:11.88:343,0,12	1/1:4,9:13:26.99:253,27,0	0/0:24,0:24:18.43:0,18,222	0/0:12,0:12:17.85:0,18,129	1/1:6,17:23:17.13:321,17,0	1/1:7,12:19:27.04:263,27,0	1/1:7,17:25:38.85:355,39,0	1/1:5,15:21:41.94:394,42,0	0/0:27,0:27:53.57:0,54,389	1/1:6,19:25:31.63:452,32,0	1/1:3,8:12:18.03:175,18,0	1/1:7,10:16:11.65:266,12,0	1/1:5,19:24:54.51:516,55,0	1/1:3,7:10:15.02:146,15,0	1/1:5,4:9:9.41:76,9,0	0/1:1,6:7:9.89:76,0,10	1/1:5,8:13:21.03:204,21,0	1/1:1,12:15:35.89:335,36,0	1/1:9,16:25:24.39:383,24,0	1/1:10,18:28:13.71:401,14,0	1/1:7,1:8:5.75:41,6,0
chr10	110446676	.	A	ATT	3039.69	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-4.201;DP=517;FS=11.838;HRun=10;HaplotypeScore=67.9782;InbreedingCoeff=0.8873;MQ=63.06;MQ0=4;MQRankSum=1.683;QD=23.56;ReadPosRankSum=-0.613;VQSLOD=1.6594;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:42:92.90:0,93,927	0/0:14,0:14:22.31:0,22,234	0/1:11,0:8:23.82:24,0,66	0/0:12,0:10:23.19:0,23,176	0/0:20,0:24:37.99:0,38,528	0/0:28,0:28:60.07:0,60,610	0/0:16,0:16:48.08:0,48,480	0/0:28,0:31:38.41:0,38,495	0/0:14,0:14:39.08:0,39,397	0/0:18,0:18:45.07:0,45,453	0/0:9,0:9:24.05:0,24,244	1/1:1,16:18:29.59:412,30,0	1/1:1,19:22:44.10:599,44,0	1/1:6,14:20:40.02:585,40,0	1/1:0,21:21:45.12:647,45,0	0/0:21,0:21:63.13:0,63,634	0/0:23,0:26:50.54:0,51,544	0/0:19,0:18:38.99:0,39,386	0/0:15,0:14:38.88:0,39,379	0/0:17,0:17:45.09:0,45,458	0/0:22,0:22:51.06:0,51,518	1/1:0,4:4:9.03:134,9,0	1/1:3,11:14:29.59:412,30,0	1/1:3,12:16:29.97:425,30,0	0/0:15,0:15:36.05:0,36,366	0/0:20,0:20:44.83:0,45,510	0/0:17,0:17:45.07:0,45,448	0/0:6,0:6:8.99:0,9,92
chr10	110447155	.	A	AGAAGAGGAG	5039.16	PASS	AB=0.877;AC=16;AF=0.286;AN=56;BaseQRankSum=-7.819;DP=603;FS=1.034;HRun=0;HaplotypeScore=171.5701;InbreedingCoeff=0.5643;MQ=57.46;MQ0=10;MQRankSum=-4.775;QD=22.91;ReadPosRankSum=-0.129;VQSLOD=4.3393;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:83.38:0,83,1187	0/0:10,0:10:30.08:0,30,608	0/0:31,0:10:14.13:0,14,229	0/0:23,0:9:19.82:0,20,294	0/1:13,0:13:81.87:82,0,384	0/0:11,0:11:2.09:0,2,437	0/1:31,0:31:66.93:67,0,1132	0/0:25,0:24:8.95:0,9,537	0/0:22,0:22:41.98:0,42,971	0/0:14,0:14:39.06:0,39,743	0/0:12,0:12:33.03:0,33,753	1/1:0,19:23:21.07:1015,21,0	1/1:0,20:22:14.96:731,15,0	1/1:1,27:34:27.06:1208,27,0	1/1:0,24:29:27.09:1265,27,0	0/0:19,0:19:57.18:0,57,1524	0/0:28,0:29:18.23:0,18,928	0/0:24,0:24:39.17:0,39,958	0/0:19,0:18:47.09:0,47,599	0/0:15,0:15:12.96:0,13,522	0/0:41,0:39:19.93:0,20,1318	1/1:1,8:10:12.04:311,12,0	1/1:0,8:11:3.01:116,3,0	0/1:1,24:33:7.71:224,0,8	0/1:13,0:13:20.77:21,0,352	0/0:30,0:29:83.03:0,83,1325	0/0:15,0:15:42.49:0,42,730	0/0:4,0:4:6.88:0,7,117
chr10	110448528	.	C	CGACG	34106.15	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=15.628;DP=653;FS=2.044;HRun=0;HaplotypeScore=233.9399;InbreedingCoeff=0.9990;MQ=70.32;MQ0=4;MQRankSum=-16.244;QD=67.40;ReadPosRankSum=1.102;VQSLOD=4.7638;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:57.20:1517,57,0	0/0:11,0:11:33.11:0,33,692	0/0:19,0:19:43.64:0,44,718	0/0:17,0:17:33.03:0,33,489	1/1:5,15:20:48.08:1132,48,0	1/1:0,20:21:63.22:1678,63,0	1/1:4,25:29:72.52:1977,73,0	1/1:4,13:17:44.51:1076,45,0	1/1:0,16:18:54.19:1422,54,0	0/0:38,0:38:99:0,111,2317	0/0:20,0:20:60.21:0,60,1237	1/1:2,34:40:99:2820,110,0	1/1:5,26:31:93.29:2256,93,0	1/1:1,34:36:99:2741,105,0	1/1:3,34:37:99:2807,108,0	0/0:42,0:42:99:0,126,2594	1/1:4,14:18:37.22:818,37,0	1/1:1,13:14:40.02:1071,40,0	1/1:1,7:8:24.08:645,24,0	1/1:6,18:24:57.18:1413,57,0	1/1:10,15:25:51.43:1138,51,0	1/1:1,18:21:55.74:1410,56,0	1/1:2,21:24:63.22:1613,63,0	1/1:2,17:19:40.26:964,40,0	1/1:1,23:24:72.25:1903,72,0	1/1:0,14:17:51.17:1304,51,0	1/1:4,22:26:63.22:1748,63,0	1/1:1,7:8:24.08:653,24,0
chr10	110448529	.	TG	T	7155.96	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=17.174;DP=648;FS=4.064;HRun=1;HaplotypeScore=309.2797;InbreedingCoeff=0.9666;MQ=71.79;MQ0=4;MQRankSum=-16.516;QD=14.31;ReadPosRankSum=2.854;VQSLOD=4.4601;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:22:54.51:293,55,0	0/0:11,0:11:33.11:0,33,526	0/0:19,2:21:31:0,31,567	0/0:17,0:17:4.32:0,4,371	1/1:18,1:19:51.90:361,52,0	1/1:21,0:21:60.40:327,60,0	1/1:28,0:28:80.20:429,80,0	1/1:16,0:16:39.42:252,39,0	1/1:18,0:18:39.84:255,40,0	0/0:38,0:38:99:0,114,1800	0/0:20,0:20:60.20:0,60,959	1/1:41,0:40:83.24:520,83,0	1/1:31,1:30:66.60:381,67,0	1/1:36,0:36:95.43:503,95,0	1/1:38,1:38:99:588,100,0	0/0:41,0:41:99:0,123,1966	1/1:14,4:18:16.16:150,16,0	1/1:13,1:14:41.11:253,41,0	1/1:8,0:8:18.97:118,19,0	1/1:23,1:23:62.71:362,63,0	1/1:20,2:22:48.65:347,49,0	1/1:21,0:21:54.67:297,55,0	1/1:24,0:24:57.33:301,57,0	1/1:17,1:18:29.72:206,30,0	1/1:24,0:24:66.35:385,66,0	1/1:18,0:18:43.84:240,44,0	1/1:22,4:26:68.94:406,69,0	1/1:10,0:10:29.28:183,29,0
chr10	110448530	.	G	GCAGT	42154.47	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=15.874;DP=794;FS=0.342;HRun=0;HaplotypeScore=285.0010;InbreedingCoeff=0.9998;MQ=65.61;MQ0=4;MQRankSum=-16.654;QD=65.25;ReadPosRankSum=-0.454;VQSLOD=3.9301;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,20:28:72.25:1925,72,0	0/0:11,0:11:33.11:0,33,691	0/0:21,0:21:50.93:0,51,820	0/0:16,0:16:32.90:0,33,563	1/1:15,15:30:75.10:1589,75,0	1/1:5,20:25:72.25:1869,72,0	1/1:16,25:41:99:2846,114,0	1/1:10,13:23:60.21:1645,60,0	1/1:7,17:24:69.19:1750,69,0	0/0:38,0:38:99:0,114,2353	0/0:20,0:20:60.21:0,60,1258	1/1:15,34:49:99:3263,132,0	1/1:14,26:39:96.25:2298,96,0	1/1:7,35:43:99:3094,117,0	1/1:13,34:46:99:3103,118,0	0/0:42,0:42:99:0,123,2579	1/1:6,14:20:44.27:972,44,0	1/1:5,13:18:51.18:1387,51,0	1/1:7,7:14:38.60:1086,39,0	1/1:10,17:28:75.08:1729,75,0	1/1:18,15:33:74.24:1762,74,0	1/1:9,18:27:69.15:1653,69,0	1/1:5,22:29:69.24:1805,69,0	1/1:7,17:24:57.94:1431,58,0	1/1:5,23:28:81.22:2127,81,0	1/1:12,14:26:69.23:1743,69,0	1/1:12,22:34:90.31:2351,90,0	1/1:4,7:11:32.90:725,33,0
chr10	110449310	.	TGTGTGC	T	838.29	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=7.994;DP=753;FS=7.676;HRun=0;HaplotypeScore=238.1443;InbreedingCoeff=0.8080;MQ=50.43;MQ0=12;MQRankSum=-3.643;QD=5.24;ReadPosRankSum=-1.773;VQSLOD=1.1306;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:48.09:0,48,1552	0/0:12,0:12:36.12:0,36,1240	0/1:38,0:3:13.30:13,0,13	0/0:54,0:9:1.25:0,1,214	0/0:13,0:13:18.03:0,18,360	0/0:16,0:16:18.08:0,18,437	0/0:15,0:15:27.05:0,27,628	0/0:38,0:38:96.15:0,96,2708	0/0:26,0:25:51.11:0,51,1627	0/0:34,0:34:93.28:0,93,2641	0/0:23,0:23:65.24:0,65,1944	1/1:25,2:27:10.81:244,11,0	1/1:11,2:13:28.49:304,28,0	1/1:14,3:17:12.01:130,12,0	1/1:21,0:21:14.22:155,14,0	0/0:46,0:46:99:0,126,3811	0/0:33,0:33:75.25:0,75,2307	0/0:28,0:27:74.64:0,75,2175	0/0:22,0:21:45.15:0,45,1325	0/0:19,0:18:51.09:0,51,1443	0/0:118,0:115:99:0,238,7188	1/1:7,0:7:5.99:50,6,0	1/1:18,4:22:8.99:75,9,0	1/1:14,1:15:5.83:49,6,0	0/0:16,0:16:18.06:0,18,398	0/0:25,0:25:69.18:0,69,1924	0/0:18,0:18:54.05:0,54,1647	0/0:14,0:14:24.08:0,24,711
chr10	110449325	.	GCA	G	375.13	PASS	AB=0.533;AC=9;AF=0.167;AN=54;BaseQRankSum=7.508;DP=660;FS=16.717;HRun=0;HaplotypeScore=172.5237;InbreedingCoeff=0.7851;MQ=53.12;MQ0=8;MQRankSum=-6.474;QD=5.77;ReadPosRankSum=-0.873;VQSLOD=2.2882;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:60.21:0,60,1165	0/0:15,0:15:45.15:0,45,914	1/1:19,0:3:8.18:39,8,0	0/0:30,0:4:2.72:0,3,49	0/0:12,0:12:12.04:0,12,241	0/0:15,0:15:16.25:0,16,282	0/0:20,0:20:24.30:0,24,448	0/0:35,0:35:99:0,102,1951	0/0:30,0:29:66.17:0,66,1324	0/0:30,0:30:84.28:0,84,1629	0/0:19,0:19:57.20:0,57,1138	1/1:5,10:16:16.73:164,17,0	1/1:3,5:9:23.92:238,24,0	1/1:5,8:13:6.01:75,6,0	0/1:1,7:8:0.02:0,0,0	0/0:41,0:41:99:0,117,2342	0/0:32,0:32:78.26:0,78,1534	0/0:32,0:31:60.26:0,60,1623	0/0:19,0:18:51.17:0,51,1017	0/0:16,0:15:45.14:0,45,877	0/0:128,0:124:99:0,256,5111	./.	0/0:5,5:11:0:0,0,0	0/0:3,5:9:0:0,0,0	0/0:14,0:14:9.02:0,9,146	0/0:23,0:22:66.23:0,66,1307	0/0:20,0:20:57.20:0,57,1139	0/0:15,0:15:36.12:0,36,640
chr10	110449326	.	CAT	C	119.42	PASS	AB=0.944;AC=8;AF=0.148;AN=54;BaseQRankSum=7.127;DP=652;FS=10.856;HRun=0;HaplotypeScore=173.1758;InbreedingCoeff=0.6825;MQ=53.20;MQ0=7;MQRankSum=-6.129;QD=1.90;ReadPosRankSum=-0.135;VQSLOD=2.0140;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:60.21:0,60,1167	0/0:15,0:15:45.15:0,45,914	1/1:16,0:3:8.04:34,8,0	0/0:28,0:4:2.72:0,3,57	0/0:12,0:12:12.04:0,12,241	0/0:15,0:15:16.41:0,16,283	0/0:21,0:21:24.45:0,24,430	0/0:34,0:34:99:0,99,1923	0/0:30,0:29:66.17:0,66,1324	0/0:29,0:29:84.28:0,84,1635	0/0:19,0:19:57.20:0,57,1139	0/1:14,2:16:3.85:56,0,4	1/1:7,2:9:18.16:115,18,0	1/1:10,3:13:5.94:44,6,0	0/1:8,0:8:0.02:0,0,0	0/0:41,0:41:99:0,117,2344	0/0:32,0:32:78.26:0,78,1527	0/0:31,1:31:40.31:0,40,1605	0/0:19,0:18:51.17:0,51,1018	0/0:15,0:14:42.14:0,42,852	0/0:121,6:122:99:0,256,5091	./.	0/0:7,1:11:0:0,0,0	0/0:7,1:9:0:0,0,0	0/0:13,0:13:6.02:0,6,121	0/0:24,0:23:69.24:0,69,1350	0/0:20,0:20:57.20:0,57,1139	0/0:15,0:15:36.12:0,36,644
chr10	110449329	.	GCA	G	312.77	PASS	AB=0.727;AC=9;AF=0.167;AN=54;BaseQRankSum=7.157;DP=657;FS=10.595;HRun=0;HaplotypeScore=179.0678;InbreedingCoeff=0.7507;MQ=53.02;MQ0=7;MQRankSum=-5.986;QD=5.04;ReadPosRankSum=-1.560;VQSLOD=2.2980;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:66.20:0,66,1232	0/0:15,0:15:45.15:0,45,914	1/1:16,0:3:4.59:20,5,0	0/0:24,0:4:2.72:0,3,38	0/0:12,0:12:12.04:0,12,205	0/0:15,0:15:9.99:0,10,234	0/0:20,0:20:21.29:0,21,392	0/0:32,0:31:90.31:0,90,1765	0/0:31,0:30:66.16:0,66,1305	0/0:28,0:28:81.28:0,81,1602	0/0:18,0:18:54.19:0,54,1090	1/1:10,6:16:14.08:141,14,0	1/1:6,3:9:20.94:213,21,0	1/1:5,8:13:6.01:76,6,0	0/1:5,3:8:0.02:0,0,0	0/0:41,0:41:99:0,117,2343	0/0:31,0:31:64.22:0,64,1397	0/0:33,0:32:87.77:0,88,1694	0/0:21,0:20:60.21:0,60,1148	0/0:17,0:16:45.15:0,45,868	0/0:130,0:126:99:0,256,5111	./.	0/0:7,4:11:0:0,0,0	0/0:6,3:9:0:0,0,0	0/0:13,0:13:6.02:0,6,100	0/0:25,0:24:72.24:0,72,1376	0/0:21,0:21:57.20:0,57,1114	0/0:14,0:14:36.07:0,36,602
chr10	110449361	.	ATG	A	8504.12	PASS	AB=0.976;AC=27;AF=0.519;AN=52;BaseQRankSum=8.911;DP=617;FS=4.742;HRun=0;HaplotypeScore=113.1133;InbreedingCoeff=0.7219;MQ=49.92;MQ0=7;MQRankSum=-0.206;QD=21.37;ReadPosRankSum=2.990;VQSLOD=5.4880;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,17:22:33.09:434,33,0	0/0:11,0:11:27.09:0,27,454	0/0:7,0:1:2.99:0,3,24	0/0:19,0:3:3.01:0,3,47	0/1:9,0:9:0.12:0,0,0	0/1:9,0:9:0.01:0,0,0	0/0:21,0:21:10.57:0,11,133	1/1:3,28:27:75.19:951,75,0	1/1:3,31:33:30.36:499,30,0	0/0:37,0:37:99:0,99,1671	0/0:15,0:15:45.15:0,45,756	0/0:16,0:16:1.53:0,2,4	0/0:9,0:9:1.13:0,1,17	0/0:10,0:10:2.63:0,3,12	0/1:12,1:13:0:0,0,0	0/0:44,0:44:99:0,111,1835	1/1:6,28:34:60.87:753,61,0	1/1:3,25:27:63.20:827,63,0	1/1:6,21:24:60.11:721,60,0	1/1:2,12:13:24.08:315,24,0	1/1:17,100:113:99:2388,182,0	0/0:4,0:4:0:0,0,0	./.	./.	1/1:11,0:11:0.45:0,0,0	1/1:2,22:24:19.14:749,19,0	1/1:0,16:15:42.14:552,42,0	1/1:1,8:9:24.08:315,24,0
chr10	110449376	.	CATGCATGTGTGTGCAT	C	422.95	PASS	AB=0.789;AC=8;AF=0.148;AN=54;BaseQRankSum=4.477;DP=701;FS=2.618;HRun=0;HaplotypeScore=287.8924;InbreedingCoeff=0.2001;MQ=47.41;MQ0=11;MQRankSum=-4.007;QD=3.41;ReadPosRankSum=-1.426;VQSLOD=2.3705;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:26:46.36:0,46,1910	0/0:10,0:10:30.10:0,30,1434	0/0:9,0:2:6.02:0,6,127	0/0:31,0:2:3.01:0,3,148	1/1:10,0:10:0.03:0,0,0	0/0:10,0:11:5.65:0,6,45	0/1:27,0:27:12.19:28,0,12	0/0:31,0:27:75.19:0,75,2379	0/0:40,0:40:54.12:0,54,2240	0/0:34,0:34:99:0,102,5511	0/0:20,0:20:56.96:0,57,2954	0/1:9,14:23:38.06:85,0,38	0/1:7,16:23:0.06:398,0,0	0/0:4,14:18:7.94:0,8,86	0/0:7,12:19:2.51:0,3,7	0/0:42,0:42:99:0,123,6884	0/1:31,0:33:15.78:16,0,2470	0/0:27,0:26:61.44:0,61,2766	0/0:30,0:27:71:0,71,2392	0/0:16,0:15:24.55:0,25,1114	0/0:113,0:109:99:0,202,8638	1/1:8,0:8:0.10:0,0,0	./.	0/0:8,18:26:2.04:0,2,6	0/0:12,0:13:3.36:0,3,24	0/0:23,0:23:68.14:0,68,2821	0/0:19,0:18:46.20:0,46,1874	0/0:10,0:10:30.10:0,30,1651
chr10	110449380	.	C	CGT	154.19	PASS	AB=0.922;AC=15;AF=0.268;AN=56;BaseQRankSum=7.501;DP=709;FS=0.000;HRun=0;HaplotypeScore=186.8147;InbreedingCoeff=0.6523;MQ=47.06;MQ0=10;MQRankSum=-5.389;QD=0.87;ReadPosRankSum=-4.776;VQSLOD=0.2763;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:30.69:0,31,599	0/0:9,0:9:27.05:0,27,389	0/0:10,0:2:5.98:0,6,69	0/0:33,0:2:3.01:0,3,49	0/1:10,0:10:0.02:0,0,0	1/1:11,0:11:3.09:16,3,0	1/1:31,0:31:1.25:5,1,0	0/0:29,0:25:72.22:0,72,1136	0/0:42,0:42:6.13:0,6,643	0/0:33,0:32:96.32:0,96,1533	0/0:19,0:19:54.18:0,54,872	1/1:21,4:25:8.27:77,8,0	1/1:18,5:23:11.57:161,12,0	1/1:16,2:18:5.20:24,5,0	0/1:16,3:19:0:0,0,0	0/0:44,0:44:99:0,120,1956	0/0:34,0:34:50.86:0,51,972	0/0:27,0:26:62.26:0,62,1040	0/0:27,0:26:67.09:0,67,1036	0/0:15,0:15:24.04:0,24,354	0/0:114,0:109:99:0,190,2957	0/0:4,4:8:0.12:0,0,0	0/0:6,1:7:0:0,0,0	0/1:25,3:28:0.01:0,0,0	1/1:13,0:13:0.46:1,0,0	0/0:25,0:25:71.86:0,72,1076	0/0:18,0:17:44.91:0,45,716	0/0:10,0:10:30.10:0,30,473
chr10	110449381	.	A	ATG	596.90	PASS	AB=0.780;AC=16;AF=0.286;AN=56;BaseQRankSum=5.782;DP=727;FS=0.698;HRun=0;HaplotypeScore=193.3158;InbreedingCoeff=0.7207;MQ=46.94;MQ0=12;MQRankSum=-4.724;QD=3.17;ReadPosRankSum=-6.116;VQSLOD=0.8701;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:30.65:0,31,468	0/0:8,0:8:21.05:0,21,260	0/0:10,0:2:6.02:0,6,75	0/0:34,0:2:3.01:0,3,39	0/1:6,5:13:0.02:0,0,0	1/1:3,8:11:9.03:154,9,0	1/1:13,20:34:15.04:253,15,0	0/0:29,0:26:57.18:0,57,738	0/0:43,0:43:6.08:0,6,481	0/0:33,0:32:84.27:0,84,1104	0/0:19,0:19:51.15:0,51,656	1/1:24,0:27:8.27:76,8,0	1/1:21,0:23:11.60:178,12,0	1/1:16,0:18:5.20:24,5,0	0/1:18,0:19:0:0,0,0	0/0:45,0:45:99:0,123,1601	0/0:34,0:34:54.93:0,55,705	0/0:27,0:26:56.08:0,56,723	0/0:27,0:26:57.17:0,57,736	0/0:15,0:15:15.05:0,15,197	0/0:115,0:110:99:0,160,2061	0/0:8,0:9:0.12:0,0,0	0/0:7,0:7:0:0,0,0	1/1:25,0:29:2.73:22,3,0	1/1:7,6:13:3:51,3,0	0/0:27,0:27:65.09:0,65,798	0/0:20,0:19:32.78:0,33,461	0/0:10,0:10:30.08:0,30,371
chr10	110449392	.	T	TGC	261.86	PASS	AB=0.930;AC=13;AF=0.232;AN=56;BaseQRankSum=10.249;DP=797;FS=6.578;HRun=0;HaplotypeScore=216.2996;InbreedingCoeff=-0.1301;MQ=45.53;MQ0=14;MQRankSum=-6.140;QD=0.79;ReadPosRankSum=-2.433;VQSLOD=1.3808;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:18.43:18,0,138	0/1:8,0:8:0.53:1,0,145	0/0:13,0:2:5.91:0,6,44	0/0:41,0:2:6.01:0,6,63	0/0:11,0:12:2.85:0,3,43	0/0:11,0:11:9.03:0,9,125	0/0:39,0:39:29.92:0,30,410	0/0:30,0:27:23.37:0,23,446	0/1:53,0:53:15.97:16,0,221	0/0:36,0:35:74.34:0,74,980	0/0:18,0:18:51.04:0,51,630	0/1:23,6:29:57.48:66,0,57	0/1:18,5:23:9.80:128,0,10	0/1:16,4:20:9.22:13,0,9	0/1:20,2:21:0.04:0,0,0	0/0:50,0:50:99:0,102,1477	0/1:33,0:34:17.76:18,0,205	0/1:30,0:29:5.28:5,0,212	0/0:28,0:28:44.77:0,45,438	0/0:15,0:15:13.66:0,14,97	0/0:119,0:114:79.75:0,80,897	0/1:6,5:11:4.25:49,0,4	0/0:6,1:7:0:0,0,0	0/0:26,3:29:2.84:0,3,14	0/0:14,0:14:9.03:0,9,127	0/1:33,0:33:69.98:70,0,257	0/1:21,0:20:6.25:6,0,159	0/1:11,0:11:0.35:0,0,148
chr10	110449394	.	C	CGTGTGT	6977.07	PASS	AB=0.964;AC=23;AF=0.426;AN=54;BaseQRankSum=3.338;DP=810;FS=2.918;HRun=0;HaplotypeScore=235.3122;InbreedingCoeff=0.5827;MQ=45.40;MQ0=16;MQRankSum=-7.217;QD=14.97;ReadPosRankSum=-3.342;VQSLOD=3.4787;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,8:37:41.69:640,42,0	0/0:5,0:8:12.84:0,13,165	./.	0/0:44,0:2:3.01:0,3,37	0/0:12,0:12:2.88:0,3,62	0/0:10,0:11:8.16:0,8,182	0/0:35,0:38:29.97:0,30,602	1/1:27,0:25:29.97:497,30,0	1/1:36,13:56:32.85:489,33,0	0/0:33,0:36:51.15:0,51,952	0/0:18,0:19:36.59:0,37,748	0/1:30,0:31:59.74:60,0,205	0/1:24,0:24:1.62:2,0,6	0/0:22,0:22:0.85:0,1,137	0/0:23,0:24:8.21:0,8,58	0/0:43,0:49:97.06:0,97,1864	1/1:27,4:33:30.05:672,30,0	1/1:21,4:29:56.04:960,56,0	1/1:29,0:29:27.46:339,27,0	1/1:10,3:14:5.76:116,6,0	1/1:106,4:112:29.17:752,29,0	0/0:12,0:12:6.35:0,6,79	0/0:7,0:7:0:0,0,0	0/0:29,0:29:3.01:0,3,62	0/0:14,0:14:9.01:0,9,187	1/1:22,9:33:0.61:1499,1,0	1/1:18,3:20:36.04:734,36,0	0/1:11,0:12:44.37:217,0,44
chr10	110450005	.	AG	A	13103.95	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=10.636;DP=851;FS=8.747;HRun=3;HaplotypeScore=86.4868;InbreedingCoeff=0.9999;MQ=78.86;MQ0=0;MQRankSum=1.374;QD=33.43;ReadPosRankSum=1.694;VQSLOD=4.9777;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,46:49:99:1636,132,0	0/0:12,0:12:36.12:0,36,517	0/0:22,0:22:65.43:0,65,847	0/0:18,0:18:46.38:0,46,599	0/0:24,0:24:69.22:0,69,965	0/0:33,0:32:99:0,99,1388	0/0:35,0:35:93.30:0,93,1315	1/1:3,23:26:69.17:826,69,0	1/1:0,28:28:75.24:930,75,0	0/0:29,0:29:84.28:0,84,1205	0/0:15,0:15:42.14:0,42,605	0/0:36,0:36:99:0,105,1475	0/0:32,0:32:96.31:0,96,1360	0/0:35,0:35:99:0,99,1392	0/0:50,0:50:99:0,141,1991	0/0:33,0:33:99:0,99,1408	1/1:1,31:32:87.27:1079,87,0	1/1:1,33:34:93.29:1153,93,0	1/1:2,33:35:96.26:1172,96,0	1/1:0,23:23:60.12:724,60,0	1/1:4,67:71:99:2417,196,0	0/0:29,0:29:71.73:0,72,1013	0/0:21,0:21:60.19:0,60,843	0/0:35,0:35:96.31:0,96,1363	1/1:0,21:21:54.17:669,54,0	1/1:1,36:37:68.11:1271,68,0	1/1:2,22:24:66.21:818,66,0	1/1:0,12:12:33.10:409,33,0
chr10	110450175	.	AGGCCCGAAGGGGCCATC	A	18053.69	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=16.765;DP=747;FS=11.436;HRun=0;HaplotypeScore=346.0069;InbreedingCoeff=0.9942;MQ=79.05;MQ0=0;MQRankSum=-17.230;QD=99.74;ReadPosRankSum=7.423;VQSLOD=3.3135;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,163,12268	0/0:15,0:15:42.14:0,42,2816	0/0:19,0:19:57.19:0,57,2671	0/0:21,0:21:60.21:0,60,3517	0/0:20,0:20:60.21:0,60,4099	0/0:27,0:26:72.25:0,72,5528	0/0:38,0:38:99:0,114,7483	0/0:38,0:38:99:0,111,6902	0/0:19,0:19:57.20:0,57,4333	0/0:28,0:28:75.26:0,75,4430	0/0:12,0:12:30.09:0,30,1543	1/1:8,23:31:63.22:3074,63,0	1/1:5,19:24:57.20:2751,57,0	1/1:6,42:48:99:4875,99,0	1/1:4,24:28:66.23:3250,66,0	0/0:31,0:31:90.27:0,90,6549	0/0:28,0:28:84.26:0,84,5847	0/0:27,0:27:72.23:0,72,5452	0/0:27,0:27:78.26:0,78,4673	0/0:21,0:21:57.20:0,57,4010	0/0:41,0:41:99:0,117,8306	1/1:5,12:17:36.12:1743,36,0	1/1:1,15:16:35.20:1769,35,0	1/1:5,12:17:12.04:591,12,0	0/0:26,0:26:78.26:0,78,5630	0/0:24,0:24:69.22:0,69,4901	0/0:32,0:32:93.32:0,93,7057	0/0:16,0:16:48.08:0,48,2794
chr10	110453269	.	CT	C	2254.34	PASS	AB=0.688;AC=29;AF=0.518;AN=56;BaseQRankSum=-0.124;DP=719;FS=0.854;HRun=16;HaplotypeScore=118.1807;InbreedingCoeff=0.2852;MQ=78.29;MQ0=5;MQRankSum=0.676;QD=4.72;ReadPosRankSum=6.266;VQSLOD=1.7612;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,14:27:13.07:142,0,13	0/0:10,0:15:19.98:0,20,182	0/0:40,1:29:2.82:0,3,83	0/0:19,2:13:2.59:0,3,98	0/0:18,1:30:57.32:0,57,313	0/0:6,0:19:17.08:0,17,86	0/0:7,0:17:20.20:0,20,121	0/1:22,22:46:22.22:237,0,22	0/1:11,11:23:0.01:103,0,0	0/0:31,1:38:32.63:0,33,387	0/0:22,0:28:24.24:0,24,269	1/1:12,14:26:3.76:121,4,0	1/1:6,4:11:4.73:24,5,0	0/1:8,6:15:9.87:45,0,10	0/1:15,23:39:37.88:246,0,38	0/1:28,5:35:1.18:1,0,326	1/1:6,11:19:9.61:136,10,0	1/1:4,6:10:5.80:36,6,0	1/1:9,7:18:19.85:116,20,0	1/1:8,22:33:42.55:232,43,0	1/1:7,9:18:24.43:136,24,0	1/1:15,12:29:17.59:193,18,0	1/1:23,11:35:0.26:172,0,0	0/1:13,5:19:24.22:88,0,24	0/0:10,0:30:31.91:0,32,166	0/1:17,12:31:16.69:162,0,17	1/1:11,16:29:28.55:159,29,0	0/1:7,6:14:21.56:88,0,22
chr10	110458024	.	GGGAA	G	3987.23	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=0.520;DP=663;FS=0.977;HRun=0;HaplotypeScore=133.1923;InbreedingCoeff=0.9974;MQ=84.82;MQ0=0;MQRankSum=-4.002;QD=51.12;ReadPosRankSum=2.109;VQSLOD=4.6573;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,2674	0/0:6,0:6:18.06:0,18,504	0/0:23,0:23:37.49:0,37,1481	0/0:18,0:18:48.16:0,48,1238	1/1:1,15:16:33.11:658,33,0	1/1:3,20:23:66.14:1233,66,0	1/1:0,23:23:57.20:1138,57,0	0/0:27,0:27:81.28:0,81,2172	0/0:22,0:22:66.23:0,66,1813	0/0:18,0:18:54.17:0,54,1401	0/0:15,0:15:45.15:0,45,1245	0/0:27,0:27:78.25:0,78,2099	0/0:21,0:21:63.22:0,63,1702	0/0:18,0:18:54.17:0,54,1451	0/0:41,0:41:99:0,123,3395	0/0:20,0:20:60.21:0,60,1678	0/0:40,0:40:99:0,120,3240	0/0:24,0:24:66.23:0,66,1746	0/0:21,0:21:63.21:0,63,1704	0/0:27,0:27:78.25:0,78,2107	0/0:48,0:48:99:0,138,3765	0/0:20,0:20:57.20:0,57,1594	0/0:18,0:18:54.17:0,54,1437	0/0:28,0:28:81.28:0,81,2251	1/1:0,16:16:48.16:958,48,0	0/0:25,0:25:75.25:0,75,1997	0/0:36,0:36:99:0,99,2685	0/0:9,0:9:27.09:0,27,742
chr10	110459329	.	T	TG	4745.26	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-10.148;DP=706;FS=3.083;HRun=7;HaplotypeScore=73.0872;InbreedingCoeff=0.9930;MQ=70.69;MQ0=0;MQRankSum=0.652;QD=30.22;ReadPosRankSum=1.691;VQSLOD=5.4217;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,114,1083	0/0:7,0:7:18.03:0,18,174	0/0:18,0:18:41.99:0,42,387	0/0:12,0:12:12.47:0,12,239	0/0:31,0:31:81.12:0,81,776	0/0:32,0:32:78.11:0,78,753	0/0:36,0:36:93.13:0,93,892	0/0:27,0:27:51.06:0,51,488	0/0:31,0:31:87.12:0,87,833	0/0:25,0:25:69.10:0,69,663	0/0:19,0:19:57.05:0,57,537	1/1:1,26:27:71.96:869,72,0	1/1:2,19:21:48.15:580,48,0	1/1:0,20:20:51.16:616,51,0	1/1:4,22:26:57.17:688,57,0	0/0:19,0:19:51.08:0,51,492	0/0:31,0:31:93.15:0,93,898	0/0:22,0:22:63.06:0,63,594	0/0:27,0:27:69.07:0,69,657	0/0:20,0:20:51.08:0,51,492	0/0:61,0:62:99:0,161,1514	1/1:1,23:24:60.18:724,60,0	1/1:0,14:14:39.12:471,39,0	1/1:3,22:25:66.20:797,66,0	0/0:24,0:24:69.11:0,69,666	0/0:37,0:37:99:0,99,956	0/0:17,0:17:48.03:0,48,449	0/0:9,0:9:24.02:0,24,225
chr10	110460606	.	G	GAAAATAAATAAAAAAT	15648.64	PASS	AB=0.893;AC=41;AF=0.788;AN=52;BaseQRankSum=1.696;DP=389;FS=12.133;HRun=0;HaplotypeScore=140.3627;InbreedingCoeff=0.7049;MQ=59.24;MQ0=11;MQRankSum=-7.295;QD=49.52;ReadPosRankSum=-0.818;VQSLOD=3.3321;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,1:18:24.08:722,24,0	0/0:4,0:4:12.04:0,12,438	0/0:12,0:5:4.88:0,5,47	0/1:22,0:11:1.38:1,0,50	1/1:25,0:25:24.08:937,24,0	1/1:10,6:16:27.09:1826,27,0	1/1:6,0:5:6.02:148,6,0	1/1:39,0:39:54.18:2125,54,0	1/1:10,0:10:9.03:392,9,0	0/0:16,0:16:30.09:0,30,1063	0/0:19,0:19:24.05:0,24,680	1/1:9,0:9:12.04:238,12,0	1/1:5,2:7:6.02:286,6,0	1/1:5,0:5:6.02:261,6,0	1/1:10,3:13:15.05:989,15,0	0/0:14,0:13:15.05:0,15,513	1/1:28,0:28:35.99:1805,36,0	1/1:10,8:20:21.07:1582,21,0	1/1:13,4:18:21.07:787,21,0	1/1:13,0:13:3.01:59,3,0	1/1:8,0:8:3.01:219,3,0	./.	1/1:6,0:6:3.01:39,3,0	./.	1/1:10,2:12:18.06:1147,18,0	1/1:12,3:15:21.07:1060,21,0	1/1:15,0:15:12.04:404,12,0	1/1:4,4:8:12.04:620,12,0
chr10	110460631	.	T	TA	718.58	PASS	AB=0.836;AC=10;AF=0.179;AN=56;BaseQRankSum=8.833;DP=351;FS=21.265;HRun=5;HaplotypeScore=48.7427;InbreedingCoeff=-0.2497;MQ=72.42;MQ0=1;MQRankSum=-5.833;QD=5.13;ReadPosRankSum=2.738;VQSLOD=-0.5465;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:11,5:16:99:164,0,215	0/0:10,0:10:30.05:0,30,306	0/0:14,0:14:22.89:0,23,209	0/0:29,0:15:18.76:0,19,167	0/1:13,5:18:78.80:79,0,275	0/0:14,0:14:0.36:0,0,282	0/1:5,1:6:21.39:21,0,142	0/1:30,8:38:99:179,0,698	0/0:5,0:5:9.02:0,9,97	0/0:22,0:21:63.15:0,63,671	0/0:14,0:14:39.10:0,39,419	0/1:7,4:11:99:131,0,125	0/1:3,0:3:0.22:0,0,56	0/0:3,0:3:9.02:0,9,97	0/0:6,0:6:8.83:0,9,152	0/0:14,0:14:39.10:0,39,418	0/1:19,7:26:99:152,0,379	0/0:12,0:12:11.70:0,12,239	0/0:20,0:20:8.45:0,8,441	0/1:5,1:6:21.39:21,0,142	0/0:6,0:6:15.04:0,15,161	0/0:5,0:5:12.03:0,12,129	0/1:7,0:7:21.01:21,0,143	0/0:4,0:4:6.01:0,6,64	0/0:12,0:12:23.89:0,24,304	0/0:10,0:10:11.88:0,12,185	0/1:6,2:9:86.10:86,0,137	0/0:11,0:11:3.28:0,3,231
chr10	110462851	.	CAG	C	18557.46	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=12.142;DP=726;FS=22.695;HRun=0;HaplotypeScore=101.0606;InbreedingCoeff=0.9963;MQ=79.07;MQ0=3;MQRankSum=-4.828;QD=39.74;ReadPosRankSum=3.656;VQSLOD=4.2485;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,65:64:99:2561,175,0	0/0:11,0:11:33.11:0,33,611	0/0:37,0:36:91.09:0,91,1586	0/0:40,0:36:32.82:0,33,1237	0/0:21,0:21:60.21:0,60,1104	0/0:23,0:23:66.23:0,66,1228	0/0:28,0:28:81.28:0,81,1505	1/1:1,37:38:99:1592,111,0	1/1:1,29:30:84.28:1237,84,0	0/0:21,0:21:60.21:0,60,1114	0/0:17,0:17:51.17:0,51,955	1/1:1,15:16:36.59:530,37,0	1/1:0,24:23:66.22:969,66,0	1/1:1,17:18:45.15:656,45,0	1/1:0,23:23:60.20:883,60,0	0/0:41,0:41:99:0,120,2232	1/1:2,33:35:87.29:1281,87,0	1/1:1,15:15:42.14:618,42,0	1/1:0,20:20:60.20:883,60,0	1/1:0,20:20:57.19:839,57,0	1/1:2,33:35:90.20:1325,90,0	1/1:1,11:12:36.12:526,36,0	1/1:1,5:6:18.06:263,18,0	1/1:0,44:44:99:1855,126,0	0/0:19,0:19:57.20:0,57,1067	1/1:1,30:31:87.28:1259,87,0	1/1:0,29:29:72.24:1059,72,0	1/1:0,5:5:15.05:221,15,0
chr10	110463632	.	T	TTTTTTTTTTTTTTGGTTC	10086.97	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=5.726;DP=581;FS=9.509;HRun=0;HaplotypeScore=269.2981;InbreedingCoeff=0.8058;MQ=62.17;MQ0=1;MQRankSum=-10.488;QD=72.05;ReadPosRankSum=-3.427;VQSLOD=2.3717;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,114,4579	0/0:8,0:8:21.06:0,21,850	0/1:11,0:9:9.73:10,0,261	0/0:4,0:3:2.98:0,3,25	0/0:29,0:29:62.28:0,62,2515	0/0:23,0:23:50.99:0,51,1964	0/0:25,0:24:57.18:0,57,2451	0/1:30,0:28:12.45:12,0,1368	0/0:22,0:22:51.02:0,51,2130	0/0:31,0:31:75.09:0,75,2788	0/0:12,0:12:33.09:0,33,1209	1/1:13,2:16:39.12:2008,39,0	1/1:13,0:13:21.06:863,21,0	1/1:11,2:12:27.09:1662,27,0	1/1:20,0:20:30.10:1958,30,0	0/0:26,0:26:63.06:0,63,2537	0/0:36,0:36:61.47:0,61,3207	0/0:19,0:19:42.53:0,43,1841	0/0:14,0:14:29.34:0,29,1168	0/0:37,0:37:81.05:0,81,3354	0/0:12,0:12:30.09:0,30,1132	1/1:12,0:11:21.06:877,21,0	1/1:13,0:12:33.07:1635,33,0	1/1:7,1:10:18.06:1062,18,0	0/0:30,0:30:72.05:0,72,2945	0/0:23,0:23:48:0,48,1886	0/0:34,0:32:72.09:0,72,3200	0/0:10,0:10:24.06:0,24,1076
chr10	110463899	.	CT	C	1724.97	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.941;DP=538;FS=15.876;HRun=10;HaplotypeScore=62.8590;InbreedingCoeff=0.9344;MQ=66.47;MQ0=0;MQRankSum=-1.638;QD=17.60;ReadPosRankSum=2.564;VQSLOD=2.8085;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,135,1479	0/0:5,0:5:12.03:0,12,133	0/0:22,0:22:14.92:0,15,355	0/0:15,0:12:1.42:0,1,222	0/0:22,0:22:42.11:0,42,464	0/0:23,1:24:66.18:0,66,728	0/0:12,0:12:33.07:0,33,356	0/0:22,2:24:21:0,21,499	0/0:22,0:22:54.15:0,54,596	0/0:23,2:25:11.05:0,11,572	0/0:14,0:14:36.10:0,36,396	1/1:2,14:16:35.98:312,36,0	1/1:1,13:14:35.99:312,36,0	1/1:1,11:12:32.99:287,33,0	1/1:8,14:22:29.95:260,30,0	0/0:25,0:25:57.15:0,57,623	0/0:34,0:34:81.08:0,81,856	0/0:21,0:21:57.09:0,57,606	0/0:12,0:12:30.07:0,30,326	0/0:17,0:17:42.11:0,42,464	0/0:33,0:33:81.20:0,81,887	1/1:1,4:5:12:104,12,0	1/1:0,7:7:17.95:149,18,0	1/1:1,21:22:56.98:495,57,0	0/0:11,0:11:21.06:0,21,232	0/0:21,0:21:48.13:0,48,531	0/0:25,0:25:66.15:0,66,711	0/0:5,0:5:15.04:0,15,166
chr10	110463970	.	C	CAGGGGCAGGGGCAGGGGT	6414.14	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=1.341;DP=546;FS=3.857;HRun=0;HaplotypeScore=271.5963;InbreedingCoeff=0.9253;MQ=66.81;MQ0=0;MQRankSum=-9.478;QD=103.45;ReadPosRankSum=-1.224;VQSLOD=4.0033;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,99,4008	0/0:10,0:10:24.03:0,24,802	0/0:13,0:13:15.05:0,15,479	0/0:18,0:17:33.05:0,33,1023	0/0:22,0:22:27.09:0,27,1242	0/0:28,0:28:66.21:0,66,3009	0/0:28,0:28:57.14:0,57,2053	0/0:24,0:24:21:0,21,709	0/0:23,0:23:57.20:0,57,2437	0/0:27,0:27:54.18:0,54,2349	0/0:14,0:14:27.05:0,27,902	1/1:14,2:16:36.04:1868,36,0	1/1:5,1:6:15.01:602,15,0	1/1:5,0:5:9.03:431,9,0	1/1:14,3:17:45.02:2659,45,0	0/0:24,0:24:51.17:0,51,2251	0/0:35,0:35:84.21:0,84,3202	0/0:24,0:24:57.18:0,57,2511	0/0:18,0:18:27.06:0,27,837	0/0:18,0:18:30.09:0,30,1322	0/0:32,0:32:78.22:0,78,3115	1/1:1,2:5:5.95:238,6,0	1/1:3,0:3:3.01:49,3,0	1/1:9,1:10:15.05:565,15,0	0/0:24,0:24:63.22:0,63,2801	0/0:17,0:17:30.09:0,30,1035	0/0:24,0:24:51.14:0,51,2121	0/0:14,0:14:30.08:0,30,1367
chr10	110464324	.	C	CAAAAAGAA	4714.16	PASS	AB=0.974;AC=14;AF=0.350;AN=40;BaseQRankSum=-2.128;DP=324;FS=6.405;HRun=0;HaplotypeScore=131.1658;InbreedingCoeff=0.5550;MQ=69.25;MQ0=15;MQRankSum=-8.621;QD=39.28;ReadPosRankSum=-0.846;VQSLOD=4.0674;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:2.88:0,3,50	0/0:13,0:13:36.12:0,36,875	0/0:19,0:14:14.44:0,14,252	0/0:12,0:7:3.06:0,3,87	1/1:3,21:23:36.12:1161,36,0	1/1:4,9:12:27.06:1004,27,0	1/1:2,10:12:24.08:996,24,0	0/0:28,0:26:15.94:0,16,307	1/1:9,0:8:2.27:6,2,0	0/0:24,0:24:69.18:0,69,1604	0/0:19,0:18:42.13:0,42,902	./.	./.	./.	./.	0/0:23,0:22:57.18:0,57,1387	1/1:13,0:11:2.37:20,2,0	0/0:6,0:8:7.22:0,7,75	0/0:13,0:12:12.44:0,12,190	./.	0/0:4,0:4:3.01:0,3,51	./.	./.	./.	1/1:3,15:18:39.09:1491,39,0	0/0:17,0:13:6.02:0,6,126	0/1:17,0:17:24.56:25,0,128	0/1:12,0:12:12.05:12,0,148
chr10	110464329	.	AG	A	1899.86	PASS	AC=22;AF=0.500;AN=44;BaseQRankSum=2.483;DP=321;FS=5.649;HRun=1;HaplotypeScore=89.3932;InbreedingCoeff=0.8971;MQ=76.12;MQ0=4;MQRankSum=-4.167;QD=13.19;ReadPosRankSum=-6.117;VQSLOD=0.1717;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,2:20:41.57:302,42,0	0/0:12,0:12:36.12:0,36,502	0/0:21,0:18:9.37:0,9,334	0/0:14,0:9:10.88:0,11,129	0/0:22,0:21:38.21:0,38,279	0/0:15,0:14:26.57:0,27,204	0/0:12,0:11:26.35:0,26,163	1/1:17,8:25:37.36:400,37,0	1/1:11,0:10:21.76:166,22,0	0/0:23,0:23:69.23:0,69,962	0/0:17,0:17:51.02:0,51,644	./.	./.	./.	./.	0/0:23,0:22:63.18:0,63,845	1/1:7,3:10:18.19:117,18,0	1/1:8,2:10:20.02:162,20,0	1/1:9,2:10:14.04:145,14,0	1/1:7,0:7:5.87:37,6,0	1/1:0,5:5:3.01:38,3,0	./.	0/0:1,0:1:0.89:0,1,2	./.	0/0:17,0:17:38.41:0,38,289	1/1:12,4:15:27.18:254,27,0	1/1:14,3:16:25.73:265,26,0	1/1:11,1:12:21.21:197,21,0
chr10	110464335	.	AG	A	2117.11	PASS	AB=1.000;AC=23;AF=0.523;AN=44;BaseQRankSum=2.998;DP=335;FS=2.273;HRun=1;HaplotypeScore=93.1483;InbreedingCoeff=0.8420;MQ=78.52;MQ0=2;MQRankSum=-4.695;QD=12.10;ReadPosRankSum=-5.400;VQSLOD=0.1683;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:51.12:370,51,0	0/0:13,0:13:39.10:0,39,486	0/0:22,1:21:34.34:0,34,414	0/0:12,0:9:15.78:0,16,113	0/1:22,0:21:8.30:8,0,164	0/0:14,0:14:28.09:0,28,220	0/0:12,0:11:11.95:0,12,109	1/1:25,1:26:41.18:417,41,0	1/1:11,0:10:22.13:168,22,0	0/0:26,0:26:78.18:0,78,960	0/0:18,0:18:47.60:0,48,544	./.	./.	./.	./.	0/0:24,0:23:66.18:0,66,830	1/1:10,0:10:18.66:116,19,0	1/1:9,1:10:20.36:171,20,0	1/1:9,1:10:19.26:151,19,0	1/1:8,0:8:7.18:42,7,0	1/1:6,0:6:6.01:66,6,0	./.	0/0:1,0:1:0.89:0,1,2	./.	0/0:16,0:16:34.11:0,34,201	1/1:15,2:16:13.71:260,14,0	1/1:20,0:19:34.17:303,34,0	1/1:13,0:13:25.96:228,26,0
chr10	110464494	.	GGA	G	5554.91	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.854;DP=621;FS=4.991;HRun=0;HaplotypeScore=97.8217;InbreedingCoeff=0.9835;MQ=79.35;MQ0=2;MQRankSum=-4.183;QD=31.21;ReadPosRankSum=2.967;VQSLOD=7.0032;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1827	0/0:4,0:4:12.04:0,12,210	0/0:20,0:20:48.13:0,48,733	0/0:24,0:23:48.16:0,48,779	0/0:17,0:17:45.15:0,45,788	0/0:16,0:16:45.15:0,45,773	0/0:19,0:19:51.17:0,51,887	0/0:30,0:29:75.24:0,75,1257	0/0:22,0:22:60.21:0,60,1040	0/0:12,0:12:33.11:0,33,579	0/0:20,0:19:54.18:0,54,946	1/1:2,40:41:87.29:1176,87,0	1/1:0,23:22:63.21:852,63,0	1/1:2,22:23:57.19:770,57,0	1/1:4,31:35:75.25:1014,75,0	0/0:34,0:34:93.32:0,93,1626	0/0:36,0:36:96.33:0,96,1681	0/0:15,0:15:39.09:0,39,641	0/0:25,0:25:69.23:0,69,1169	0/0:21,0:21:60.21:0,60,1051	0/0:29,0:29:78.27:0,78,1362	1/1:1,9:10:24.08:324,24,0	1/1:0,17:17:42.14:568,42,0	1/1:4,23:27:63.21:851,63,0	0/0:17,0:17:48.16:0,48,841	0/0:24,0:24:63.22:0,63,1104	0/0:18,0:18:48.16:0,48,829	0/0:3,0:3:9.03:0,9,150
chr10	110464981	.	TGC	T	1197.15	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=9.079;DP=595;FS=2.042;HRun=0;HaplotypeScore=135.4925;InbreedingCoeff=0.6713;MQ=54.96;MQ0=13;MQRankSum=2.158;QD=6.08;ReadPosRankSum=0.544;VQSLOD=3.4538;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:77.66:0,78,1298	0/0:12,0:12:12.34:0,12,434	0/0:36,0:17:44.49:0,44,562	0/0:35,0:22:49.25:0,49,766	1/1:17,0:16:2.96:14,3,0	0/1:20,0:20:8.89:9,0,38	0/1:23,0:22:46.97:47,0,67	0/0:26,0:24:57.04:0,57,1093	0/0:18,0:18:45.39:0,45,818	0/0:20,0:18:51.11:0,51,802	0/0:16,0:15:27.71:0,28,536	1/1:24,5:28:55.12:450,55,0	1/1:12,1:13:23.86:181,24,0	1/1:14,1:14:23.84:195,24,0	1/1:21,1:22:27.84:223,28,0	0/0:24,0:23:63.12:0,63,1079	0/0:27,0:27:43.08:0,43,980	0/0:27,0:26:13.49:0,13,890	0/0:22,0:20:38.09:0,38,792	0/0:15,0:15:20.53:0,21,393	0/0:30,0:30:39.13:0,39,745	1/1:17,0:16:2.52:24,3,0	1/1:8,0:7:11.99:100,12,0	0/1:18,0:18:22.18:95,0,22	1/1:15,0:15:6.89:53,7,0	0/0:26,0:24:59.13:0,59,843	0/0:14,0:13:15.16:0,15,578	0/0:9,0:9:10.11:0,10,301
chr10	110464987	.	TGTGCGTGC	T	2058	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=6.473;DP=594;FS=9.374;HRun=0;HaplotypeScore=175.9019;InbreedingCoeff=0.5283;MQ=49.62;MQ0=16;MQRankSum=1.496;QD=10.14;ReadPosRankSum=-1.756;VQSLOD=1.5295;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:68.89:0,69,1368	0/0:12,0:12:30.07:0,30,539	0/0:31,0:12:24.62:0,25,291	0/1:29,0:17:7.72:8,0,197	0/1:17,0:16:8.85:9,0,52	0/0:23,0:23:12.76:0,13,248	0/0:25,0:24:9.29:0,9,228	0/0:31,0:28:24.59:0,25,717	0/0:18,0:18:24.26:0,24,785	0/1:18,0:16:10.75:11,0,821	0/0:18,0:16:35.94:0,36,804	1/1:29,3:31:52.32:795,52,0	1/1:8,1:9:17.54:267,18,0	1/1:16,1:16:23.70:393,24,0	1/1:20,1:21:24.05:345,24,0	0/0:22,0:21:53.88:0,54,1299	0/0:27,0:27:19.80:0,20,1134	0/0:27,0:26:22.58:0,23,1109	0/0:22,0:20:21.06:0,21,848	0/0:14,0:14:20.28:0,20,339	0/0:32,0:32:20.10:0,20,828	0/1:15,0:14:0:0,0,0	1/1:9,0:8:12.91:175,13,0	0/1:26,0:24:9.97:223,0,10	0/0:13,0:13:5.99:0,6,60	0/0:23,0:21:10.76:0,11,1040	0/0:14,0:13:15.83:0,16,430	0/1:9,0:9:10.61:11,0,295
chr10	110464989	.	TGCGTGC	T	2099.66	PASS	AB=0.956;AC=22;AF=0.393;AN=56;BaseQRankSum=7.058;DP=584;FS=0.000;HRun=0;HaplotypeScore=155.0751;InbreedingCoeff=0.2068;MQ=48.06;MQ0=17;MQRankSum=2.746;QD=5.96;ReadPosRankSum=-1.674;VQSLOD=2.1308;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:38:59.10:0,59,1164	0/0:12,0:12:29.74:0,30,500	0/0:29,0:10:24.15:0,24,290	0/1:29,0:16:8.46:8,0,197	0/1:17,0:16:8.85:9,0,39	0/0:24,0:24:11.85:0,12,190	0/1:24,0:23:0.50:0,0,203	0/1:31,0:28:10.43:10,0,691	0/0:18,0:18:23.15:0,23,729	0/1:17,0:15:10.74:11,0,713	0/0:17,0:15:36.12:0,36,778	1/1:29,0:28:52.26:772,52,0	1/1:8,0:8:17.80:256,18,0	1/1:16,0:15:23.70:382,24,0	1/1:21,0:21:24.05:345,24,0	0/0:23,0:22:54.09:0,54,1182	0/1:27,0:28:27.56:28,0,975	0/1:26,0:26:3.14:3,0,852	0/1:24,0:21:6.98:7,0,748	0/0:13,0:14:13.65:0,14,301	0/0:30,0:30:18.34:0,18,686	0/1:2,12:13:0:0,0,0	1/1:9,0:8:12.91:175,13,0	0/1:26,0:24:9.91:224,0,10	0/0:14,0:14:1.16:0,1,24	0/1:23,0:21:33.03:33,0,828	0/0:13,0:12:30.56:0,31,421	0/1:9,0:9:11.40:11,0,255
chr10	110464991	.	C	CGTGT	918.81	PASS	AB=0.986;AC=15;AF=0.278;AN=54;BaseQRankSum=8.148;DP=576;FS=3.572;HRun=0;HaplotypeScore=145.3991;InbreedingCoeff=-0.0430;MQ=47.29;MQ0=18;MQRankSum=2.557;QD=3.75;ReadPosRankSum=-2.693;VQSLOD=2.1656;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:1.70:0,2,624	0/0:10,0:10:23.97:0,24,329	0/0:28,0:10:15.46:0,15,203	0/0:25,0:13:20.50:0,21,230	0/1:16,1:16:10.01:226,0,10	0/1:23,2:25:31.65:273,0,32	0/1:23,0:22:40.14:292,0,40	0/0:29,0:26:12.36:0,12,644	0/0:18,0:18:2.42:0,2,438	0/0:18,0:15:41.51:0,42,600	0/0:17,0:15:36.05:0,36,525	0/1:27,0:26:37.02:55,0,37	0/0:8,0:8:2.33:0,2,28	0/1:16,0:15:13.70:14,0,20	1/1:21,0:21:2.68:24,3,0	0/0:23,0:22:48.14:0,48,736	0/1:28,0:28:27.34:27,0,369	0/1:29,0:27:33.17:33,0,479	0/0:22,0:19:19.46:0,19,476	0/1:13,0:13:23.27:23,0,201	0/0:33,0:33:31.35:0,31,406	./.	1/1:10,0:9:0.51:2,1,0	0/0:24,0:22:1.78:0,2,15	1/1:13,1:14:7.32:64,7,0	0/1:22,0:20:31.17:31,0,327	0/0:13,0:12:6.63:0,7,303	0/0:9,0:9:14.31:0,14,146
chr10	110464995	.	CGT	C	303.73	PASS	AB=0.973;AC=19;AF=0.380;AN=50;BaseQRankSum=2.576;DP=575;FS=8.767;HRun=0;HaplotypeScore=128.9890;InbreedingCoeff=-0.0117;MQ=46.47;MQ0=19;MQRankSum=3.794;QD=1.06;ReadPosRankSum=-0.681;VQSLOD=1.9603;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:17.38:0,17,144	0/1:10,0:10:11.66:12,0,83	./.	./.	1/1:16,0:15:3.01:33,3,0	1/1:17,8:25:10.44:127,10,0	0/1:22,4:24:26.98:85,0,27	0/0:28,0:25:16.41:0,16,93	0/0:18,0:18:9.46:0,9,75	0/1:19,3:19:49.39:49,0,144	0/1:17,0:15:15.11:15,0,126	0/1:25,0:24:12.66:13,0,42	0/1:8,0:8:5.42:6,0,5	1/1:16,0:15:2.59:10,3,0	0/0:19,0:19:2.98:0,3,24	0/1:20,0:20:55.94:56,0,232	0/1:29,0:29:14.27:14,0,133	0/0:28,0:26:3.34:0,3,130	0/0:26,0:23:11.25:0,11,107	0/1:13,0:13:3.94:4,0,32	0/1:33,0:33:2.27:2,0,97	./.	0/1:10,0:9:0:0,0,0	0/0:22,0:20:0:0,0,0	1/1:15,0:14:3.64:15,4,0	0/0:24,0:22:3.69:0,4,85	0/0:13,0:12:8.89:0,9,71	0/0:8,0:8:4.99:0,5,25
chr10	110464997	.	T	TGC	309.26	PASS	AB=0.979;AC=7;AF=0.125;AN=56;BaseQRankSum=5.306;DP=593;FS=7.913;HRun=0;HaplotypeScore=138.9907;InbreedingCoeff=0.5029;MQ=46.27;MQ0=21;MQRankSum=2.471;QD=2.95;ReadPosRankSum=-0.507;VQSLOD=1.5385;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:30.57:0,31,359	0/0:11,0:11:23.95:0,24,223	0/0:24,0:7:11.73:0,12,90	0/0:24,0:9:16.55:0,17,141	1/1:16,1:16:14.87:111,15,0	1/1:25,2:27:12.17:156,12,0	0/1:28,0:26:3.21:145,0,3	0/0:28,0:25:58.45:0,58,453	0/1:18,0:18:0.65:1,0,221	0/0:24,0:21:7.56:0,8,365	0/0:17,0:15:32.95:0,33,309	0/0:25,0:24:40.38:0,40,331	0/0:9,0:9:15.40:0,15,107	0/0:17,0:16:20.74:0,21,164	0/0:19,0:19:20.93:0,21,166	0/0:22,0:20:18.50:0,19,460	0/0:31,0:31:27.97:0,28,230	0/0:29,0:27:58.23:0,58,410	0/0:28,0:25:50.67:0,51,377	0/0:13,0:13:5.47:0,5,118	0/0:33,0:33:36.77:0,37,297	0/0:14,0:12:0:0,0,0	0/0:10,0:9:8.97:0,9,71	0/0:23,0:21:14.90:0,15,112	0/1:14,1:14:15.44:25,0,15	0/0:24,0:22:25.37:0,25,297	0/0:13,0:12:29.84:0,30,237	0/0:8,0:8:0.84:0,1,87
chr10	110465389	.	C	CGGG	2175.34	PASS	AB=0.833;AC=14;AF=0.250;AN=56;BaseQRankSum=0.350;DP=431;FS=1.463;HRun=0;HaplotypeScore=125.0169;InbreedingCoeff=0.7090;MQ=49.29;MQ0=17;MQRankSum=-3.929;QD=23.14;ReadPosRankSum=2.553;VQSLOD=3.9128;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:33.07:0,33,552	0/0:3,0:2:2.97:0,3,20	0/0:14,0:4:8.89:0,9,80	0/1:6,0:4:7.70:8,0,11	0/0:16,0:16:18.06:0,18,296	0/0:22,0:22:32.47:0,32,513	0/0:15,0:15:23.91:0,24,370	0/0:24,0:22:48.12:0,48,816	0/0:16,0:16:20.90:0,21,338	0/0:13,0:14:30.10:0,30,495	0/0:7,0:7:5.95:0,6,104	1/1:10,6:17:27.08:482,27,0	1/1:5,5:10:15.05:286,15,0	1/1:5,11:16:30.10:538,30,0	1/1:12,9:21:33.11:698,33,0	0/0:17,0:17:36.09:0,36,594	0/0:28,0:27:27.08:0,27,439	0/0:22,0:20:19.31:0,19,302	0/0:12,0:13:33.02:0,33,498	0/0:16,0:14:18.06:0,18,324	0/0:10,0:9:5.94:0,6,105	1/1:6,2:8:6.02:113,6,0	1/1:6,2:7:6.02:113,6,0	0/1:4,3:7:3.19:114,0,3	0/0:8,0:7:12.04:0,12,212	0/0:28,0:27:63.03:0,63,995	0/0:26,0:26:47.50:0,47,580	0/0:8,0:5:3.01:0,3,55
chr10	110465408	.	A	ACAG	5417.10	PASS	AB=0.677;AC=28;AF=0.500;AN=56;BaseQRankSum=-6.940;DP=491;FS=48.220;HRun=0;HaplotypeScore=81.9071;InbreedingCoeff=0.3655;MQ=60.98;MQ0=7;MQRankSum=0.033;QD=16.47;ReadPosRankSum=6.385;VQSLOD=2.4674;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,16:24:17.35:380,17,0	0/0:2,0:2:3.47:0,3,25	0/0:26,0:5:5.14:0,5,109	0/0:17,0:9:13.53:0,14,130	0/0:14,0:14:30.93:0,31,344	0/0:22,0:22:58.13:0,58,733	0/0:17,0:17:35.99:0,36,501	1/1:27,3:30:24.76:822,25,0	0/1:7,7:17:0.73:298,0,1	0/0:19,0:19:37.31:0,37,472	0/0:14,0:14:28.33:0,28,335	0/1:7,12:19:63.05:255,0,63	0/1:5,6:11:21.19:188,0,21	0/1:7,7:14:33.37:194,0,33	0/1:14,11:25:99:187,0,155	0/0:16,0:16:36.39:0,36,476	1/1:4,19:25:14.94:205,15,0	1/1:6,13:22:13.15:249,13,0	1/1:4,12:20:35.93:705,36,0	1/1:16,0:18:31.57:415,32,0	1/1:5,7:11:1.18:35,1,0	0/1:3,7:11:10.97:214,0,11	0/1:6,4:10:4.40:150,0,4	0/1:8,0:8:6.19:44,0,6	0/0:15,0:14:32.65:0,33,410	1/1:8,14:22:5.28:660,5,0	1/1:9,18:29:6.11:414,6,0	1/1:1,5:6:1.55:4,2,0
chr10	110467241	.	G	GTGGT	3447.73	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-7.152;DP=514;FS=0.547;HRun=0;HaplotypeScore=98.6047;InbreedingCoeff=0.9488;MQ=85.74;MQ0=0;MQRankSum=-2.904;QD=54.73;ReadPosRankSum=-0.622;VQSLOD=4.6361;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:57.20:0,57,1068	0/0:3,0:3:9.03:0,9,165	0/0:27,0:27:66.18:0,66,1154	0/0:21,0:21:5.08:0,5,686	1/1:2,13:16:36.08:837,36,0	1/1:2,17:19:39.13:878,39,0	1/1:5,16:21:47.98:1265,48,0	0/0:29,0:29:75.24:0,75,1331	0/0:16,0:16:26.64:0,27,496	0/0:23,0:23:66.23:0,66,1214	0/0:12,0:12:30.09:0,30,522	0/0:28,0:28:84.27:0,84,1507	0/0:17,0:17:48.15:0,48,851	0/0:19,0:19:54.17:0,54,962	0/0:22,0:22:60.21:0,60,1104	0/0:16,0:16:48.15:0,48,853	0/0:16,0:16:28.80:0,29,550	0/0:22,0:22:35.29:0,35,626	0/0:12,0:12:33.11:0,33,606	0/0:16,0:16:36.12:0,36,662	0/0:30,0:30:75.26:0,75,1380	0/0:11,0:11:33.10:0,33,579	0/0:12,0:12:33.11:0,33,606	0/0:21,0:20:42.14:0,42,752	1/1:0,7:7:21.07:468,21,0	0/0:19,0:19:51.17:0,51,938	0/0:22,0:22:51.17:0,51,938	0/0:11,0:11:30.10:0,30,549
chr10	110467313	.	CT	C	1273.43	PASS	AC=14;AF=0.269;AN=52;BaseQRankSum=4.867;DP=504;FS=46.023;HRun=8;HaplotypeScore=58.6110;InbreedingCoeff=0.9440;MQ=36.33;MQ0=86;MQRankSum=-4.225;QD=13.13;ReadPosRankSum=3.035;VQSLOD=0.2664;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:36:37:0,37,437	0/0:9,0:5:9.03:0,9,109	./.	./.	0/0:21,0:16:15.92:0,16,172	0/0:20,0:14:36.10:0,36,423	0/0:26,0:19:31.88:0,32,328	0/0:23,0:18:36.07:0,36,413	0/0:21,0:21:21.52:0,22,242	0/0:17,0:14:22.01:0,22,256	0/0:19,0:16:19.73:0,20,205	1/1:5,12:15:36.05:344,36,0	1/1:5,8:10:15.02:145,15,0	1/1:6,11:14:24.04:232,24,0	1/1:4,10:14:30.03:288,30,0	0/0:22,0:21:42.95:0,43,400	0/0:30,0:25:30.81:0,31,340	0/0:31,0:27:43.94:0,44,496	0/0:18,0:15:32.13:0,32,368	0/0:20,0:18:23.59:0,24,228	0/0:13,0:9:9.03:0,9,109	1/1:3,6:8:18.01:167,18,0	1/1:2,7:6:12.02:116,12,0	1/1:10,8:11:16.36:171,16,0	0/0:13,0:12:20.08:0,20,197	0/0:19,0:15:30.09:0,30,362	0/0:12,0:9:7.26:0,7,75	0/0:21,0:14:30.09:0,30,362
chr10	110467416	.	GACAA	G	5542.85	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.119;DP=587;FS=13.431;HRun=0;HaplotypeScore=100.5189;InbreedingCoeff=0.9968;MQ=76.80;MQ0=0;MQRankSum=-1.226;QD=39.88;ReadPosRankSum=4.000;VQSLOD=4.7059;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:87.30:0,87,2180	0/0:6,0:6:15.05:0,15,392	0/0:20,0:19:54.19:0,54,1366	0/0:17,0:16:34.65:0,35,684	0/0:23,0:23:63.22:0,63,1600	0/0:18,0:17:45.15:0,45,1179	0/0:25,0:25:69.22:0,69,1752	0/0:23,0:23:63.22:0,63,1615	0/0:30,0:30:87.30:0,87,2213	0/0:27,0:27:75.25:0,75,1895	0/0:11,0:11:33.11:0,33,854	1/1:1,21:21:48.16:871,48,0	1/1:2,14:16:36.12:655,36,0	1/1:2,16:18:42.14:758,42,0	1/1:1,23:24:57.20:1036,57,0	0/0:36,0:36:99:0,102,2597	0/0:30,0:30:84.29:0,84,2200	0/0:24,0:24:57.17:0,57,1435	0/0:20,0:19:42.14:0,42,1085	0/0:16,0:16:42.14:0,42,1100	0/0:25,0:25:69.24:0,69,1800	1/1:3,11:15:36.12:643,36,0	1/1:3,18:20:42.14:763,42,0	1/1:2,21:23:44.85:817,45,0	0/0:10,0:10:30.10:0,30,759	0/0:20,0:20:54.17:0,54,1362	0/0:21,0:21:57.20:0,57,1451	0/0:11,0:11:33.11:0,33,862
chr10	110468009	.	C	CTTTT	1217.94	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.731;DP=473;FS=3.933;HRun=9;HaplotypeScore=92.5024;InbreedingCoeff=0.8359;MQ=69.88;MQ0=1;MQRankSum=-3.584;QD=19.64;ReadPosRankSum=-3.172;VQSLOD=0.6212;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:66.12:0,66,960	0/0:11,0:11:30.09:0,30,439	0/1:14,0:12:2.83:3,0,222	0/0:10,0:10:8.32:0,8,170	0/0:21,0:21:53.50:0,54,754	0/0:24,0:24:57.15:0,57,815	0/0:9,0:10:18.06:0,18,323	0/0:37,0:37:81.02:0,81,1225	0/0:13,0:13:30.05:0,30,418	0/0:23,0:23:50.84:0,51,713	0/0:29,0:29:68.94:0,69,978	1/1:0,5:5:12.04:254,12,0	1/1:3,5:8:9.03:212,9,0	1/1:3,5:8:9.03:209,9,0	1/1:6,3:8:6.02:144,6,0	0/0:24,0:25:57.11:0,57,814	0/0:16,0:16:33.09:0,33,483	0/0:17,0:17:42.10:0,42,586	0/0:20,0:19:57.19:0,57,817	0/0:24,0:24:66.18:0,66,902	0/0:9,0:9:27.09:0,27,395	1/1:3,0:2:6.01:68,6,0	1/1:2,2:4:6.02:143,6,0	1/1:2,7:9:15.52:362,16,0	0/0:16,0:16:42.12:0,42,612	0/0:34,0:34:78.17:0,78,1122	0/0:26,0:25:44.91:0,45,917	0/0:14,0:14:33.09:0,33,483
chr10	110468432	.	C	CG	7026.01	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.356;DP=738;FS=6.988;HRun=1;HaplotypeScore=106.1955;InbreedingCoeff=0.9966;MQ=61.83;MQ0=6;MQRankSum=-0.420;QD=36.59;ReadPosRankSum=2.584;VQSLOD=4.6798;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,126,1618	0/0:15,0:15:42.14:0,42,543	0/0:16,0:11:30.10:0,30,385	0/0:18,0:16:44.88:0,45,555	0/0:15,0:15:39.13:0,39,505	0/0:26,0:26:72.22:0,72,920	0/0:33,0:33:96.24:0,96,1197	0/0:34,0:33:87.26:0,87,1113	0/0:26,0:26:75.24:0,75,973	0/0:26,0:26:75.21:0,75,954	0/0:10,0:10:27.09:0,27,350	1/1:2,54:56:99:2110,141,0	1/1:0,17:17:48.16:719,48,0	1/1:2,23:25:69.23:1033,69,0	1/1:0,28:28:69.23:1033,69,0	0/0:34,0:34:99:0,102,1309	0/0:39,0:39:99:0,111,1440	0/0:28,0:28:78.25:0,78,1011	0/0:25,0:25:72.23:0,72,931	0/0:15,0:15:39.13:0,39,506	0/0:56,0:56:99:0,153,1972	1/1:1,11:10:15.01:199,15,0	1/1:2,18:17:30.10:449,30,0	1/1:0,34:34:99:1483,99,0	0/0:19,0:19:45.62:0,46,584	0/0:26,0:26:75.24:0,75,973	0/0:25,0:25:75.24:0,75,969	0/0:13,0:13:36.12:0,36,467
chr10	110469735	.	GCA	G	1433	PASS	AB=0.828;AC=15;AF=0.268;AN=56;BaseQRankSum=15.209;DP=962;FS=60.476;HRun=0;HaplotypeScore=167.6355;InbreedingCoeff=-0.3907;MQ=58.72;MQ0=3;MQRankSum=-13.864;QD=2.40;ReadPosRankSum=2.314;VQSLOD=0.8493;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:47,10:55:99:126,0,2061	0/0:7,0:7:21.07:0,21,378	0/0:20,0:19:50.37:0,50,825	0/0:7,0:7:15.05:0,15,257	0/1:39,7:43:91.96:92,0,1658	0/0:39,8:43:27.45:0,27,1737	0/1:18,6:22:71.66:72,0,717	0/0:49,1:48:99:0,105,2121	0/0:17,4:19:9.23:0,9,813	0/1:38,8:45:99:190,0,1593	0/0:26,2:28:27.29:0,27,1114	0/1:42,13:48:99:197,0,1658	0/0:37,7:37:21.71:0,22,1666	0/1:28,11:32:99:103,0,1158	0/1:36,9:39:74.44:74,0,1365	0/1:37,17:48:99:189,0,1783	0/1:23,8:29:34.76:35,0,1009	0/1:17,3:17:14.76:15,0,708	0/1:20,5:21:91.09:91,0,754	0/0:25,1:23:9.24:0,9,790	0/0:33,2:35:17.60:0,18,1473	0/1:21,6:27:77.65:78,0,653	0/0:32,2:33:40.57:0,41,1325	0/0:28,0:27:75.22:0,75,1291	0/1:34,4:38:23.24:23,0,1514	0/1:39,11:47:99:200,0,1367	0/1:32,8:39:99:103,0,1443	0/0:16,2:18:0.15:0,0,626
chr10	110469749	.	CGTG	C	2983.81	PASS	AB=0.827;AC=19;AF=0.339;AN=56;BaseQRankSum=16.341;DP=906;FS=72.614;HRun=0;HaplotypeScore=175.3337;InbreedingCoeff=-0.5138;MQ=59.13;MQ0=0;MQRankSum=-15.780;QD=4.50;ReadPosRankSum=1.424;VQSLOD=0.4286;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,9:48:99:314,0,2605	0/0:9,0:9:27.09:0,27,638	0/0:24,0:24:62.36:0,62,1366	0/0:11,0:11:29.28:0,29,707	0/1:36,6:42:99:152,0,2154	0/1:38,9:44:87.49:87,0,2406	0/1:17,8:21:99:146,0,1111	0/0:48,4:48:99:0,138,3025	0/1:20,5:23:89.16:89,0,1328	0/1:32,8:39:99:262,0,1936	0/1:20,2:22:39.38:39,0,1223	0/1:35,16:45:99:399,0,2211	0/0:33,6:35:49.75:0,50,2151	0/1:28,11:35:99:217,0,1792	0/1:33,10:40:99:202,0,2084	0/1:35,18:46:99:342,0,2282	0/1:24,7:30:99:161,0,1564	0/1:15,2:16:7.70:8,0,947	0/1:16,5:18:99:104,0,985	0/0:19,1:19:4.50:0,4,1142	0/0:35,2:37:21.20:0,21,2321	0/1:19,6:25:98.14:98,0,1131	0/0:24,2:26:16.44:0,16,1407	0/0:24,1:25:22.42:0,22,1601	0/1:32,4:36:99:103,0,2160	0/1:29,13:39:99:260,0,1905	0/1:32,8:39:99:150,0,2149	0/1:14,2:16:7.57:8,0,898
chr10	110469850	.	GT	G	4531.78	PASS	AB=0.782;AC=22;AF=0.393;AN=56;BaseQRankSum=17.773;DP=803;FS=3.968;HRun=4;HaplotypeScore=94.1931;InbreedingCoeff=0.3851;MQ=55.80;MQ0=23;MQRankSum=-4.539;QD=11.74;ReadPosRankSum=4.006;VQSLOD=2.8072;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,6:47:57.57:0,58,1611	0/1:5,4:9:50.80:51,0,189	0/0:15,0:11:27:0,27,348	0/0:20,0:19:48.08:0,48,601	0/1:14,7:21:99:158,0,471	0/0:26,6:28:9.45:0,9,978	0/0:23,6:25:27.30:0,27,794	0/0:39,6:35:96.29:0,96,1286	0/1:20,6:22:47.60:48,0,636	0/0:29,5:29:58.69:0,59,1096	0/1:19,8:24:99:107,0,723	1/1:3,28:21:57.16:671,57,0	1/1:2,31:23:51.16:612,51,0	1/1:3,28:22:54.17:647,54,0	1/1:4,35:28:66.20:791,66,0	0/0:41,7:45:9.53:0,10,1401	0/0:28,2:29:81.26:0,81,1117	0/0:13,3:14:39.13:0,39,545	0/0:24,4:22:60.20:0,60,833	0/1:28,8:36:17.52:18,0,989	0/0:29,4:31:21.36:0,21,1113	1/1:0,12:9:15.05:180,15,0	1/1:1,17:10:21.06:252,21,0	1/1:1,29:27:69.21:828,69,0	0/1:20,5:23:38.52:39,0,753	0/0:35,1:35:63.40:0,63,1308	0/1:29,9:33:83.47:83,0,992	0/1:7,3:9:47.86:48,0,227
chr10	110469885	.	AGT	A	2452.81	PASS	AB=0.797;AC=22;AF=0.393;AN=56;BaseQRankSum=11.333;DP=921;FS=13.388;HRun=0;HaplotypeScore=138.3641;InbreedingCoeff=-0.5870;MQ=56.84;MQ0=16;MQRankSum=-8.894;QD=3.29;ReadPosRankSum=-2.976;VQSLOD=1.2922;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:43,9:48:29.24:29,0,2056	0/1:12,4:16:49.65:50,0,653	0/0:17,5:17:48.09:0,48,803	0/0:22,3:22:57.16:0,57,1002	0/1:18,7:25:99:155,0,892	0/1:28,5:31:1.47:1,0,1521	0/0:27,12:31:32.31:0,32,1394	0/1:31,2:32:1.49:1,0,1514	0/1:24,7:27:99:126,0,1138	0/1:30,10:34:38.51:39,0,1632	0/1:17,6:20:77.48:77,0,893	0/1:29,16:34:99:172,0,1409	0/0:30,4:30:35.38:0,35,1438	0/0:24,7:25:26.35:0,26,1269	0/1:31,15:42:99:361,0,1503	0/1:43,20:57:99:259,0,2268	0/1:40,8:46:57.26:57,0,2054	0/1:15,5:18:0.76:1,0,759	0/0:23,2:21:63.22:0,63,1215	0/1:23,11:33:99:231,0,1197	0/1:37,10:45:99:103,0,1948	0/1:11,6:16:73.62:74,0,540	0/1:8,10:14:99:142,0,427	0/1:31,7:37:61.44:61,0,1487	0/1:14,9:20:99:249,0,748	0/1:39,7:44:99:103,0,1989	0/1:26,12:35:99:246,0,1292	0/1:7,2:8:67.77:68,0,317
chr10	110470032	.	TA	T	1935	PASS	AB=0.966;AC=10;AF=0.179;AN=56;BaseQRankSum=-3.457;DP=578;FS=33.475;HRun=11;HaplotypeScore=107.3646;InbreedingCoeff=0.6580;MQ=57.01;MQ0=12;MQRankSum=5.110;QD=11.45;ReadPosRankSum=3.093;VQSLOD=0.9498;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:17.27:0,17,103	0/0:10,0:10:21.02:0,21,213	0/1:28,1:15:13.37:13,0,241	0/1:27,1:13:2.91:3,0,140	1/1:5,28:34:76.93:622,77,0	1/1:3,23:26:65.92:542,66,0	1/1:4,14:18:32.93:271,33,0	0/0:14,0:14:24.31:0,24,196	0/0:12,0:9:5.68:0,6,28	0/0:33,1:34:34.98:0,35,770	0/0:24,0:25:53.06:0,53,606	0/0:12,0:9:12.75:0,13,76	0/0:13,0:12:16.77:0,17,87	0/0:13,0:12:20.44:0,20,135	0/0:15,0:16:24.60:0,25,167	0/0:28,3:32:2.44:0,2,654	0/0:15,0:15:8.28:0,8,38	0/0:13,0:11:2.84:0,3,14	0/0:15,0:13:23.49:0,23,169	0/0:19,0:18:37.59:0,38,247	0/0:10,0:8:11.69:0,12,91	0/0:10,0:13:21.39:0,21,114	0/0:14,0:23:41.99:0,42,233	0/0:3,0:7:8.52:0,9,43	1/1:3,29:33:79.95:646,80,0	0/0:30,0:24:61.57:0,62,446	0/0:22,0:20:22.73:0,23,112	0/0:5,0:5:11.36:0,11,56
chr10	110470040	.	A	AAAAAG	6016.66	PASS	AB=0.988;AC=26;AF=0.464;AN=56;BaseQRankSum=-4.936;DP=611;FS=24.897;HRun=0;HaplotypeScore=133.4282;InbreedingCoeff=0.6451;MQ=59.25;MQ0=6;MQRankSum=-6.199;QD=20.33;ReadPosRankSum=-1.102;VQSLOD=2.6431;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:18:18.06:430,18,0	0/0:7,0:7:21.04:0,21,302	0/0:32,0:18:4.23:0,4,414	0/0:33,0:16:26.12:0,26,343	0/0:31,0:31:84.01:0,84,977	0/0:28,0:28:78.08:0,78,884	0/0:16,0:16:33.08:0,33,398	1/1:0,17:20:53.92:750,54,0	1/1:0,13:13:6.02:172,6,0	0/0:36,0:36:99:0,105,1489	0/0:22,0:22:66.13:0,66,1093	0/0:15,0:10:3.81:0,4,125	0/1:18,0:13:0.06:0,0,83	0/0:20,0:13:7.74:0,8,178	0/1:25,0:14:3.28:3,0,67	0/0:34,0:34:99:0,102,1442	1/1:0,12:14:9.03:253,9,0	1/1:0,15:16:3.01:86,3,0	1/1:4,14:17:39.04:662,39,0	1/1:2,19:21:41.98:860,42,0	1/1:6,0:6:11:156,11,0	0/1:12,0:10:10.90:24,0,11	0/1:25,0:21:33.24:33,0,64	0/0:6,0:5:0.24:0,0,0	0/0:35,0:35:96.21:0,96,1149	1/1:4,35:35:78.10:1465,78,0	1/1:3,27:28:26.44:776,26,0	1/1:0,5:5:12.04:345,12,0
chr10	110470048	.	AG	A	576.01	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.265;DP=601;FS=10.500;HRun=2;HaplotypeScore=108.4671;InbreedingCoeff=0.9120;MQ=59.43;MQ0=12;MQRankSum=-3.582;QD=4.92;ReadPosRankSum=-0.950;VQSLOD=-0.6013;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:20.93:0,21,262	0/0:7,0:7:21.03:0,21,272	0/0:34,0:18:48.15:0,48,505	0/0:39,0:17:23.87:0,24,327	0/0:33,0:33:90.14:0,90,1198	0/0:29,0:29:84.13:0,84,1064	0/0:15,0:15:38.94:0,39,492	0/0:22,0:21:57.03:0,57,718	0/0:15,0:11:6.02:0,6,79	0/0:33,0:33:92.47:0,92,1328	0/0:21,0:21:63.21:0,63,942	1/1:13,2:10:11.97:128,12,0	1/1:18,2:12:16.44:116,16,0	1/1:20,1:13:16.56:148,17,0	1/1:20,4:13:8.79:95,9,0	0/0:32,0:32:82.81:0,83,1300	0/0:13,0:13:12.04:0,12,165	0/0:19,0:17:9:0,9,102	0/0:21,0:18:51.05:0,51,624	0/0:24,0:22:47.99:0,48,609	0/0:6,0:5:9.03:0,9,129	1/1:8,2:8:14.15:68,14,0	1/1:18,3:17:33.10:171,33,0	1/1:6,0:5:8.95:37,9,0	0/0:34,0:34:99:0,99,1470	0/0:36,0:30:72.13:0,72,954	0/0:29,0:25:30.09:0,30,389	0/0:6,0:6:12.04:0,12,162
chr10	110470078	.	TA	T	1168.22	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=5.097;DP=614;FS=12.938;HRun=7;HaplotypeScore=79.5649;InbreedingCoeff=0.7851;MQ=58.85;MQ0=63;MQRankSum=-3.707;QD=9.42;ReadPosRankSum=1.893;VQSLOD=0.6970;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:14:15.04:0,15,176	0/0:6,0:4:12.04:0,12,151	0/0:25,0:11:16.45:0,16,133	0/0:34,0:17:22.07:0,22,174	0/0:31,0:28:69.18:0,69,824	0/0:18,0:17:42.07:0,42,508	0/0:18,0:15:18.06:0,18,223	0/0:45,0:24:48.15:0,48,603	0/0:16,0:8:3.01:0,3,34	0/0:28,0:22:54.17:0,54,679	0/0:24,0:19:51.15:0,51,629	1/1:3,16:13:27.06:274,27,0	1/1:6,12:13:27.05:271,27,0	1/1:4,16:12:30.07:304,30,0	1/1:9,20:19:33.07:336,33,0	0/0:33,0:25:69.22:0,69,864	0/0:13,0:8:3.01:0,3,38	0/1:19,0:14:4.88:5,0,136	0/0:30,0:15:30.08:0,30,362	0/0:20,0:13:30.09:0,30,371	0/0:7,0:4:4.26:0,4,41	./.	1/1:6,5:5:9.02:92,9,0	1/1:1,7:6:6.01:61,6,0	0/0:36,0:27:62.82:0,63,773	0/0:34,0:23:51.12:0,51,621	0/0:30,0:19:24.08:0,24,298	0/0:12,0:8:15.05:0,15,186
chr10	110470611	.	TTTTG	T	670.35	PASS	AB=0.944;AC=13;AF=0.232;AN=56;BaseQRankSum=4.049;DP=598;FS=41.232;HRun=0;HaplotypeScore=110.9230;InbreedingCoeff=0.7760;MQ=47.99;MQ0=44;MQRankSum=-2.822;QD=5.32;ReadPosRankSum=-3.725;VQSLOD=-0.4209;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:27:59.98:0,60,981	0/0:12,0:12:21.02:0,21,403	0/0:29,0:13:14.29:0,14,339	0/0:23,0:5:6.32:0,6,87	0/0:37,0:36:81.20:0,81,1672	0/0:15,0:15:33.11:0,33,745	0/0:22,0:19:48.16:0,48,1043	0/0:27,0:16:44.74:0,45,562	0/0:16,0:14:29.93:0,30,506	0/0:32,0:30:87.23:0,87,1688	0/0:22,0:19:54.11:0,54,1065	0/1:16,1:9:0:0,0,0	1/1:11,6:6:0.34:27,0,0	1/1:19,3:14:2.04:6,2,0	1/1:13,5:8:2.92:17,3,0	0/0:25,0:24:59.47:0,59,1295	0/0:19,0:17:39.57:0,40,681	0/0:8,0:7:12.02:0,12,193	0/0:19,0:14:33.50:0,33,440	0/0:32,0:27:68.18:0,68,1143	0/0:17,0:15:33:0,33,540	1/1:11,7:15:39.33:420,39,0	1/1:10,11:12:22.85:267,23,0	1/1:13,0:10:8.74:85,9,0	0/0:17,0:16:39.10:0,39,786	0/0:33,0:30:83.32:0,83,1352	0/0:34,0:26:50.90:0,51,831	0/0:3,0:3:6.02:0,6,124
chr10	110470615	.	G	GT	1441.31	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=11.051;DP=596;FS=0.894;HRun=12;HaplotypeScore=89.5509;InbreedingCoeff=0.5642;MQ=50.83;MQ0=35;MQRankSum=-3.079;QD=3.67;ReadPosRankSum=1.598;VQSLOD=0.9414;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:26:50.05:206,50,0	0/0:11,0:11:14.88:0,15,109	0/1:29,0:14:19.63:20,0,85	0/1:25,0:6:2.26:2,0,23	0/0:35,1:35:39.21:0,39,439	0/0:13,2:15:3.68:0,4,189	0/0:21,1:19:18.59:0,19,298	1/1:24,0:17:26.14:105,26,0	1/1:15,0:14:27.55:119,28,0	0/0:35,0:34:71.47:0,71,521	0/0:20,1:19:12.04:0,12,252	1/1:16,0:9:0.47:1,0,0	1/1:21,0:11:2.24:5,2,0	1/1:20,0:13:2.92:17,3,0	0/0:18,0:8:0.89:0,1,2	0/0:27,1:27:10.50:0,10,361	1/1:18,0:17:32.62:139,33,0	1/1:8,0:7:11.12:54,11,0	1/1:20,0:14:25.09:113,25,0	1/1:28,0:26:59.59:242,60,0	1/1:17,0:15:24.11:99,24,0	0/1:18,0:16:1.29:33,0,1	0/1:21,0:12:2.99:13,0,3	1/1:13,0:10:3.27:14,3,0	0/0:17,0:16:6.61:0,7,211	1/1:32,0:30:46.07:259,46,0	1/1:32,0:26:37.13:178,37,0	0/1:3,0:3:5.32:5,0,16
chr10	110470623	.	T	TTTTTG	608.73	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=0.373;DP=575;FS=13.433;HRun=0;HaplotypeScore=124.4250;InbreedingCoeff=0.7423;MQ=51.86;MQ0=26;MQRankSum=-1.418;QD=4.76;ReadPosRankSum=-4.425;VQSLOD=-0.2109;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:52:0,52,231	0/0:6,0:6:15.05:0,15,274	0/0:31,0:15:25.73:0,26,355	0/0:28,0:6:2.88:0,3,65	0/0:31,0:30:68.86:0,69,1062	0/0:15,0:14:33.04:0,33,533	0/0:21,0:20:47.95:0,48,671	0/0:20,0:14:31.84:0,32,147	0/0:18,0:16:23.49:0,23,90	0/0:32,0:32:78.19:0,78,1240	0/0:17,0:17:33.01:0,33,497	1/1:15,0:11:8.72:79,9,0	0/1:24,0:14:0.94:59,0,1	1/1:18,0:13:2.99:24,3,0	1/1:17,0:8:5.99:49,6,0	0/0:29,0:28:67.48:0,67,913	0/0:19,0:18:30.31:0,30,135	0/0:8,0:8:5.82:0,6,40	0/0:19,0:13:21.36:0,21,96	0/0:30,0:28:57.20:0,57,296	0/0:15,0:14:25.55:0,26,128	1/1:18,0:16:13.81:376,14,0	1/1:16,6:14:6.86:113,7,0	1/1:11,0:9:2.74:67,3,0	0/0:15,0:15:41.80:0,42,659	0/0:32,0:29:64.69:0,65,352	0/0:32,0:25:36.18:0,36,160	0/0:5,0:5:5.59:0,6,26
chr10	110470624	.	T	TTG	6410.88	PASS	AB=0.778;AC=22;AF=0.393;AN=56;BaseQRankSum=4.379;DP=579;FS=2.356;HRun=0;HaplotypeScore=81.2720;InbreedingCoeff=0.8128;MQ=51.68;MQ0=30;MQRankSum=-1.985;QD=25.44;ReadPosRankSum=5.097;VQSLOD=5.5495;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:25:56.93:906,57,0	0/0:6,0:6:18.05:0,18,236	0/0:30,0:15:24.93:0,25,302	0/1:28,0:6:0.84:1,0,83	0/0:30,0:29:83.67:0,84,1024	0/0:15,0:14:32.78:0,33,428	0/0:21,0:20:47.89:0,48,625	1/1:5,14:13:36.08:540,36,0	1/1:3,13:17:30.07:454,30,0	0/0:32,0:32:87.21:0,87,1125	0/0:17,0:17:41.28:0,41,574	0/0:15,0:11:8.54:0,9,52	0/0:25,0:15:17.31:0,17,99	0/0:19,0:13:4.96:0,5,23	0/0:18,0:8:5.87:0,6,36	0/0:30,0:28:70.52:0,71,885	1/1:1,16:18:36.04:584,36,0	1/1:1,4:8:11.87:141,12,0	1/1:9,10:13:25.15:413,25,0	1/1:4,26:28:71.42:1071,71,0	1/1:2,13:14:27.09:447,27,0	0/0:19,0:16:16.28:0,16,118	0/0:23,0:14:18.70:0,19,113	0/0:11,0:9:3.88:0,4,26	0/0:16,0:16:44.70:0,45,543	1/1:4,26:29:40.82:1115,41,0	1/1:9,21:24:47.06:694,47,0	0/1:1,4:5:15.03:44,0,15
chr10	110470866	.	G	GA	8190.02	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-12.347;DP=679;FS=21.669;HRun=7;HaplotypeScore=60.8339;InbreedingCoeff=0.9995;MQ=57.62;MQ0=22;MQRankSum=-0.005;QD=31.74;ReadPosRankSum=0.910;VQSLOD=3.0890;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:63.19:761,63,0	0/0:9,0:9:24.04:0,24,232	0/0:19,0:15:45.06:0,45,429	0/0:13,0:12:33.03:0,33,309	0/0:27,0:26:69.10:0,69,666	0/0:29,0:29:78.08:0,78,741	0/0:28,0:28:78.11:0,78,747	1/1:6,26:32:78.24:942,78,0	1/1:4,21:23:60.18:723,60,0	0/0:34,0:33:93.15:0,93,898	0/0:15,0:14:39.06:0,39,377	0/0:31,0:29:78.12:0,78,753	0/0:26,0:26:75.12:0,75,724	0/0:24,0:23:60.09:0,60,579	0/0:33,0:32:90.14:0,90,869	0/0:49,0:47:99:0,123,1187	1/1:2,26:27:69.13:801,69,0	1/1:1,17:17:48.15:580,48,0	1/1:0,11:11:30.09:362,30,0	1/1:2,31:30:87.27:1051,87,0	1/1:3,12:13:33.10:399,33,0	0/0:25,0:25:75.12:0,75,724	0/0:21,0:19:54.08:0,54,521	0/0:20,0:19:54.08:0,54,521	0/0:18,0:17:48.06:0,48,457	1/1:1,21:22:63.19:761,63,0	1/1:0,33:32:93.29:1122,93,0	1/1:0,19:19:57.17:689,57,0
chr10	110471402	.	ACGT	A	13045.16	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-0.008;DP=775;FS=2.326;HRun=0;HaplotypeScore=148.2590;InbreedingCoeff=0.9991;MQ=84.16;MQ0=0;MQRankSum=-6.037;QD=42.49;ReadPosRankSum=2.184;VQSLOD=6.4290;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,44:45:99:1878,111,0	0/0:8,0:8:24.08:0,24,553	0/0:24,0:24:48.42:0,48,1297	0/0:25,0:25:71.90:0,72,1422	0/0:34,0:34:96.32:0,96,2155	0/0:27,0:27:81.28:0,81,1811	0/0:29,0:29:84.29:0,84,1892	1/1:3,30:33:90.28:1478,90,0	1/1:1,23:24:69.24:1176,69,0	0/0:34,0:34:93.32:0,93,2143	0/0:24,0:24:72.25:0,72,1603	0/0:28,0:28:81.26:0,81,1204	0/0:28,0:28:84.27:0,84,1263	0/0:27,0:27:78.26:0,78,1199	0/0:36,0:36:99:0,105,1550	0/0:44,0:44:99:0,132,3033	1/1:1,22:23:45.15:767,45,0	1/1:0,10:10:24.08:409,24,0	1/1:3,16:19:48.16:815,48,0	1/1:4,38:42:99:1826,108,0	1/1:2,33:35:78.26:1300,78,0	0/0:22,0:22:66.17:0,66,990	0/0:27,0:27:72.20:0,72,1081	0/0:33,0:33:93.31:0,93,1403	0/0:18,0:18:54.16:0,54,1178	1/1:2,30:32:90.29:1503,90,0	1/1:1,34:35:87.30:1483,87,0	1/1:0,9:9:24.08:409,24,0
chr10	110473197	.	C	CA	2355.59	PASS	AB=0.742;AC=34;AF=0.607;AN=56;BaseQRankSum=0.520;DP=538;FS=1.859;HRun=15;HaplotypeScore=71.5636;InbreedingCoeff=0.1379;MQ=47.49;MQ0=27;MQRankSum=-1.735;QD=5.22;ReadPosRankSum=-0.162;VQSLOD=2.3366;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,12:29:0.62:218,0,1	0/0:4,0:5:4.90:0,5,24	0/0:9,0:4:2.25:0,2,18	0/1:4,0:2:4.67:15,0,5	1/1:13,15:26:9.13:256,9,0	0/1:11,10:20:6.05:164,0,6	0/1:10,3:15:15.22:88,0,15	0/1:20,7:26:65.02:73,0,65	1/1:15,3:19:11.82:88,12,0	0/0:18,0:18:19.46:0,19,113	0/0:21,1:20:8.18:0,8,146	1/1:14,4:26:27.30:174,27,0	1/1:12,3:23:2.49:88,2,0	1/1:16,0:16:5.72:29,6,0	1/1:24,0:31:16.64:163,17,0	0/0:29,1:30:25.23:0,25,239	0/1:11,13:21:0.20:205,0,0	0/1:7,4:10:9.02:42,0,9	1/1:8,3:11:10.38:85,10,0	0/1:9,4:13:0.73:76,0,1	1/1:7,6:13:6:91,6,0	0/1:10,0:14:1.16:49,0,1	1/1:10,2:16:14.54:88,15,0	0/1:6,1:13:3.12:42,0,3	0/1:12,4:16:0.10:94,0,0	1/1:17,3:21:1.16:98,1,0	0/1:11,8:18:0.04:106,0,0	1/1:15,7:21:1.02:174,1,0
chr10	110473434	.	CT	C	3176.85	PASS	AB=0.644;AC=28;AF=0.500;AN=56;BaseQRankSum=6.969;DP=541;FS=4.713;HRun=14;HaplotypeScore=62.8408;InbreedingCoeff=0.7767;MQ=68.19;MQ0=0;MQRankSum=0.854;QD=9.63;ReadPosRankSum=1.320;VQSLOD=3.1167;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,18:24:41.66:303,42,0	0/0:3,0:3:8.38:0,8,64	0/0:20,0:12:1.90:0,2,43	0/0:13,0:7:4.70:0,5,44	1/1:0,1:17:28.10:85,28,0	1/1:4,0:14:14.24:41,14,0	1/1:2,0:8:10.18:30,10,0	1/1:10,33:44:55.64:638,56,0	1/1:6,9:15:17.31:123,17,0	0/0:20,0:20:44.57:0,45,370	0/0:16,0:16:29.13:0,29,292	0/0:26,0:26:63:0,63,558	0/0:24,0:24:59.83:0,60,523	0/0:15,0:15:26.94:0,27,236	0/0:22,0:24:50.19:0,50,437	0/0:26,0:26:40.33:0,40,471	1/1:9,24:33:67.64:452,68,0	1/1:6,21:28:24.77:307,25,0	0/1:10,9:19:16.29:147,0,16	1/1:9,21:31:58.31:389,58,0	0/1:5,8:14:7.96:89,0,8	0/0:5,0:5:11.96:0,12,99	0/0:8,0:9:23.84:0,24,201	0/0:10,0:10:20.97:0,21,182	1/1:1,0:9:16.30:47,16,0	1/1:8,13:21:12.99:207,13,0	1/1:9,22:31:5.48:280,5,0	1/1:2,17:20:38.07:254,38,0
chr10	110474517	.	GA	G	1725.02	PASS	AB=0.708;AC=20;AF=0.357;AN=56;BaseQRankSum=8.699;DP=638;FS=8.170;HRun=15;HaplotypeScore=82.3795;InbreedingCoeff=0.7252;MQ=74.19;MQ0=0;MQRankSum=-0.758;QD=6.14;ReadPosRankSum=5.045;VQSLOD=2.4762;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:21:47.66:0,48,393	0/0:7,0:8:17.84:0,18,146	0/0:20,0:15:16.85:0,17,122	0/1:18,0:14:1.86:2,0,15	1/1:11,1:41:50.56:155,51,0	1/1:4,1:15:19.22:66,19,0	1/1:4,0:15:18.29:53,18,0	0/0:24,1:29:19.37:0,19,258	0/0:20,0:20:45.77:0,46,370	0/0:28,0:28:47.86:0,48,398	0/0:18,1:22:37.35:0,37,413	0/1:8,19:28:0.43:242,0,0	0/1:13,14:27:30.15:232,0,30	1/1:7,18:25:24.03:265,24,0	1/1:9,21:34:58.25:350,58,0	0/0:30,1:34:58.09:0,58,585	0/0:23,4:28:14:0,14,474	0/0:16,2:19:22.55:0,23,308	0/0:17,1:18:13.69:0,14,235	0/0:19,2:23:6.20:0,6,275	0/0:5,0:5:9:0,9,79	1/1:10,10:20:22.51:140,23,0	0/1:9,19:29:12.49:207,0,12	1/1:1,7:9:16.79:102,17,0	1/1:4,1:20:32.36:115,32,0	0/0:26,1:31:49.45:0,49,530	0/0:28,0:30:42.27:0,42,451	0/0:17,0:20:18.57:0,19,289
chr10	110476918	.	G	GGTGTGT	4580.21	PASS	AB=0.974;AC=44;AF=0.846;AN=52;BaseQRankSum=-0.705;DP=634;FS=0.815;HRun=0;HaplotypeScore=151.3006;InbreedingCoeff=0.3273;MQ=68.77;MQ0=9;MQRankSum=-2.105;QD=8.56;ReadPosRankSum=-1.267;VQSLOD=3.4587;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:9.32:137,9,0	0/0:11,0:11:17.62:0,18,197	./.	./.	1/1:10,0:16:2.13:37,2,0	1/1:22,0:24:23.53:264,24,0	1/1:22,0:24:15.87:154,16,0	1/1:33,0:32:2.97:20,3,0	1/1:7,8:17:6.02:192,6,0	0/0:23,0:23:13.61:0,14,154	0/0:11,0:12:0.74:0,1,65	1/1:4,4:27:3.01:81,3,0	1/1:22,0:22:24.81:396,25,0	1/1:1,1:19:3.01:78,3,0	1/1:3,6:32:6.02:90,6,0	0/1:26,0:32:52.67:53,0,389	1/1:23,0:23:11.94:196,12,0	0/1:17,0:18:11.15:142,0,11	1/1:15,0:18:12.01:272,12,0	1/1:23,0:21:21.04:366,21,0	1/1:38,0:37:33.03:499,33,0	1/1:2,1:19:3.01:47,3,0	1/1:0,3:12:2.82:36,3,0	1/1:2,2:38:3.01:30,3,0	1/1:19,0:23:30:375,30,0	1/1:19,0:19:30.55:600,31,0	1/1:20,0:18:18.06:351,18,0	1/1:5,0:6:6.02:164,6,0
chr10	110477453	.	C	CAA	5555.50	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-3.203;DP=343;FS=8.760;HRun=9;HaplotypeScore=48.6126;InbreedingCoeff=0.9464;MQ=67.52;MQ0=1;MQRankSum=-0.385;QD=31.75;ReadPosRankSum=-4.578;VQSLOD=3.0607;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,14:25:64:847,64,0	0/0:7,0:7:21.05:0,21,223	0/0:13,0:9:11.48:0,11,96	0/0:17,0:15:18.02:0,18,183	0/0:7,0:7:12.02:0,12,128	0/0:12,0:12:32.88:0,33,351	0/0:9,0:9:8.43:0,8,151	1/1:7,16:23:48.10:671,48,0	1/1:3,4:7:15.05:225,15,0	0/0:11,0:11:24.05:0,24,250	0/0:14,0:14:32.92:0,33,334	0/0:5,0:5:12.03:0,12,128	0/0:9,0:9:27.07:0,27,287	0/0:11,0:12:21:0,21,277	0/0:11,0:11:18.03:0,18,191	0/0:11,0:11:24.04:0,24,255	1/1:10,16:26:72.14:1003,72,0	1/1:8,5:13:27.08:386,27,0	1/1:8,6:14:30.09:437,30,0	1/1:1,9:10:24.01:319,24,0	1/1:0,3:3:9.03:139,9,0	0/0:3,0:3:9.02:0,9,96	0/0:6,0:6:12.03:0,12,128	0/0:5,0:5:15.04:0,15,160	0/0:16,0:16:42.06:0,42,434	1/1:15,4:19:32.31:381,32,0	1/1:11,12:23:60.16:851,60,0	1/1:7,3:9:24.04:296,24,0
chr10	110477532	.	C	CTT	7960.91	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-6.030;DP=506;FS=1.508;HRun=12;HaplotypeScore=67.7973;InbreedingCoeff=0.9256;MQ=77.02;MQ0=2;MQRankSum=-0.580;QD=23.21;ReadPosRankSum=0.406;VQSLOD=4.5862;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,26:37:56.13:683,56,0	0/0:12,0:12:33.02:0,33,305	0/1:20,0:16:4.64:5,0,58	0/0:18,0:12:10.97:0,11,72	0/0:18,0:19:53.77:0,54,478	0/0:6,0:7:14.70:0,15,123	0/0:10,0:10:26.89:0,27,232	1/1:16,6:21:30.07:367,30,0	1/1:2,8:11:21.01:259,21,0	0/0:22,0:22:41.96:0,42,381	0/0:22,0:23:62.75:0,63,564	1/1:0,14:15:36.12:504,36,0	1/1:1,11:14:26.58:344,27,0	1/1:2,14:17:18.06:253,18,0	1/1:0,13:14:27.09:365,27,0	0/0:25,0:26:71.72:0,72,631	1/1:4,19:25:57.18:780,57,0	1/1:0,9:11:27.08:352,27,0	1/1:11,16:28:28.52:642,29,0	1/1:7,3:10:21:252,21,0	1/1:2,5:9:20.48:212,20,0	1/1:2,6:8:14.89:142,15,0	1/1:1,13:15:24.84:279,25,0	1/1:0,8:11:29.07:340,29,0	0/0:24,0:26:56.87:0,57,570	1/1:4,25:31:80.64:994,81,0	1/1:6,20:27:56.66:745,57,0	1/1:3,13:16:33.09:444,33,0
chr10	110478892	.	CA	C	10881.91	PASS	AB=0.552;AC=42;AF=0.750;AN=56;BaseQRankSum=7.331;DP=675;FS=0.000;HRun=10;HaplotypeScore=66.7024;InbreedingCoeff=0.8081;MQ=66.35;MQ0=2;MQRankSum=1.171;QD=20.19;ReadPosRankSum=1.757;VQSLOD=5.7471;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,21:26:56.98:495,57,0	0/0:12,0:12:36.10:0,36,398	0/0:27,0:23:5.67:0,6,219	0/0:12,0:7:9.32:0,9,105	1/1:6,25:31:38.78:566,39,0	1/1:3,21:24:56.98:495,57,0	1/1:2,19:21:44.99:391,45,0	1/1:5,31:36:89.97:781,90,0	1/1:3,12:15:32.99:286,33,0	0/0:28,0:28:78.19:0,78,848	0/0:23,0:23:57.15:0,57,630	1/1:1,23:25:37.84:546,38,0	1/1:4,18:22:50.99:443,51,0	1/1:3,20:23:50.99:443,51,0	1/1:3,36:39:99:912,105,0	0/0:34,0:34:84.23:0,84,929	1/1:1,25:26:65.99:573,66,0	1/1:1,17:18:47.99:417,48,0	0/1:5,18:25:2.30:417,0,2	1/1:6,17:22:47.97:417,48,0	1/1:1,23:24:62.99:547,63,0	1/1:2,18:20:50.98:442,51,0	1/1:5,19:24:41.98:365,42,0	1/1:2,18:20:44.99:391,45,0	1/1:2,18:20:44.99:391,45,0	0/1:6,28:34:27.66:629,0,28	1/1:5,23:28:65.98:573,66,0	1/1:1,14:15:41.99:365,42,0
chr10	110479702	.	GTTTA	G	10208.45	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.657;DP=708;FS=7.193;HRun=0;HaplotypeScore=125.5394;InbreedingCoeff=0.9995;MQ=72.62;MQ0=1;MQRankSum=-4.139;QD=38.96;ReadPosRankSum=5.357;VQSLOD=4.7677;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:93.32:0,93,2415	0/0:14,0:14:39.13:0,39,1011	0/0:32,0:30:22.39:0,22,1425	0/0:22,0:21:54.17:0,54,1141	1/1:4,28:32:68.71:1089,69,0	1/1:0,19:18:45.15:790,45,0	1/1:3,18:22:45.09:772,45,0	0/0:46,0:46:99:0,129,3101	0/0:21,0:21:60.21:0,60,1482	0/0:37,0:37:99:0,99,2517	0/0:27,0:27:72.25:0,72,1859	1/1:3,18:21:51.17:916,51,0	1/1:3,13:16:36.12:646,36,0	1/1:1,22:23:57.20:1024,57,0	1/1:4,38:42:87.22:1562,87,0	0/0:38,0:38:99:0,114,2864	0/0:24,0:24:63.22:0,63,1582	0/0:16,0:16:42.14:0,42,1052	0/0:16,0:16:45.15:0,45,1110	0/0:24,0:24:66.20:0,66,1629	0/0:14,0:14:42.14:0,42,1020	1/1:1,14:15:33.11:575,33,0	1/1:0,31:31:78.10:1326,78,0	1/1:4,20:24:41.89:754,42,0	1/1:1,16:17:42.14:754,42,0	0/0:35,0:35:96.32:0,96,2381	0/0:26,0:26:72.22:0,72,1757	0/0:18,0:18:39.13:0,39,1013
chr10	110479879	.	A	AACACACACACACAC	16246.47	PASS	AB=0.933;AC=42;AF=0.750;AN=56;BaseQRankSum=3.970;DP=711;FS=0.000;HRun=0;HaplotypeScore=336.7562;InbreedingCoeff=0.7418;MQ=57.07;MQ0=15;MQRankSum=-7.099;QD=29.43;ReadPosRankSum=-3.293;VQSLOD=2.3379;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:35:12.04:423,12,0	0/0:9,0:9:21.07:0,21,727	0/0:33,0:21:5.97:0,6,129	0/0:38,0:26:20.89:0,21,354	1/1:26,2:32:18.06:926,18,0	1/1:21,0:21:17.82:1122,18,0	1/1:24,0:24:18.06:650,18,0	1/1:34,0:31:20.55:593,21,0	1/1:25,0:25:18.06:761,18,0	0/0:22,0:22:45.15:0,45,1487	0/0:19,0:22:12.16:0,12,1288	1/1:24,0:25:24.06:765,24,0	1/1:20,0:19:15.02:553,15,0	1/1:23,0:26:30.10:1240,30,0	1/1:40,0:40:24.06:802,24,0	0/0:30,0:34:14.41:0,14,1660	1/1:20,0:18:15.05:738,15,0	1/1:14,0:14:9.03:264,9,0	1/1:17,0:16:11.53:408,12,0	1/1:18,0:16:6.02:361,6,0	0/1:20,0:17:0:0,0,0	1/1:38,0:36:3.01:70,3,0	1/1:24,0:23:12.02:380,12,0	1/1:27,0:27:7.91:253,8,0	1/1:18,4:23:24.08:1447,24,0	0/1:28,0:31:56.43:2404,0,56	1/1:23,0:21:27.09:1396,27,0	1/1:7,0:8:12.04:692,12,0
chr10	110481333	.	G	GA	3144.35	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-9.126;DP=690;FS=16.885;HRun=10;HaplotypeScore=71.8705;InbreedingCoeff=0.9144;MQ=65.12;MQ0=5;MQRankSum=0.758;QD=18.07;ReadPosRankSum=1.833;VQSLOD=2.8835;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:30:79.94:0,80,646	0/0:12,0:12:23.95:0,24,197	0/0:39,0:21:25.70:0,26,194	0/1:19,0:12:2.19:2,0,16	0/0:26,0:26:71.86:0,72,584	0/0:32,0:32:86.85:0,87,707	0/0:21,0:21:59.91:0,60,492	0/0:34,1:33:18.22:0,18,423	0/0:28,0:28:71.86:0,72,584	0/0:27,0:27:65.91:0,66,542	0/0:17,1:18:15.94:0,16,337	1/1:4,23:27:37.73:586,38,0	1/1:2,20:22:29.60:518,30,0	1/1:4,20:24:35.83:411,36,0	1/1:1,17:18:33.08:352,33,0	0/0:28,0:28:77.88:0,78,637	0/0:30,0:30:74.88:0,75,615	0/0:18,1:19:18.45:0,18,346	0/0:23,2:25:4.96:0,5,452	0/0:30,0:30:75.33:0,75,611	0/0:8,0:8:17.97:0,18,148	1/1:3,16:20:44.98:462,45,0	1/1:3,23:26:44.32:659,44,0	1/1:3,14:17:33.08:352,33,0	0/0:27,1:29:30.36:0,30,569	0/0:36,0:36:98.88:0,99,813	0/0:33,0:33:83.85:0,84,685	0/0:8,0:8:23.97:0,24,197
chr10	110482139	.	TAC	T	65.23	PASS	AB=0.866;AC=10;AF=0.185;AN=54;BaseQRankSum=1.218;DP=421;FS=8.128;HRun=0;HaplotypeScore=73.9664;InbreedingCoeff=-0.0313;MQ=59.37;MQ0=20;MQRankSum=2.345;QD=0.54;ReadPosRankSum=0.033;VQSLOD=0.2976;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:18:0.89:3,1,0	0/1:4,2:6:48.52:49,0,141	0/0:40,0:17:5.91:0,6,38	./.	0/1:21,2:23:0.19:0,0,394	0/0:12,0:12:13.69:0,14,238	0/1:12,4:16:75.73:76,0,200	0/0:22,0:19:14.73:0,15,131	0/0:8,1:9:0.94:0,1,3	0/0:16,0:16:30.09:0,30,432	0/1:13,4:16:9.21:9,0,280	0/0:14,0:14:2.71:0,3,14	0/0:8,0:8:5.87:0,6,40	0/0:9,0:9:2.93:0,3,24	0/0:10,0:9:5.98:0,6,47	0/1:20,2:22:27.55:28,0,424	0/0:17,0:16:12:0,12,105	0/0:8,0:8:6.01:0,6,66	1/1:3,0:2:1.48:4,1,0	0/0:6,0:5:5.99:0,6,50	0/0:17,0:16:2.53:0,3,39	0/0:13,0:12:3.01:0,3,43	0/0:15,0:14:12:0,12,116	0/0:14,0:13:2.61:0,3,40	0/1:14,0:14:6.13:6,0,267	0/0:13,0:13:9.82:0,10,116	0/0:12,0:12:7.50:0,8,61	0/0:8,0:7:8.75:0,9,75
chr10	110482787	.	C	CT	7918.97	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=4.639;DP=634;FS=1.900;HRun=4;HaplotypeScore=99.2635;InbreedingCoeff=0.8614;MQ=76.32;MQ0=1;MQRankSum=-0.227;QD=15.38;ReadPosRankSum=2.081;VQSLOD=4.1413;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,1:17:22.49:127,22,0	0/0:14,0:14:29.79:0,30,340	0/0:29,0:24:9.87:0,10,198	0/1:10,0:9:20.88:21,0,40	1/1:31,0:31:91.02:596,91,0	1/1:17,0:17:47.35:317,47,0	1/1:17,0:17:43.67:265,44,0	1/1:45,0:44:57.93:477,58,0	1/1:10,0:11:14.40:84,14,0	0/0:18,0:18:44.97:0,45,482	0/0:21,0:21:56.75:0,57,549	1/1:7,23:30:50.03:678,50,0	1/1:7,15:22:30.09:386,30,0	1/1:5,19:24:52.98:680,53,0	1/1:6,20:26:48.16:644,48,0	0/0:37,0:37:99:0,99,992	1/1:23,0:23:31.74:138,32,0	1/1:23,0:23:34.72:174,35,0	1/1:25,1:25:55.66:329,56,0	1/1:27,1:28:46.52:299,47,0	1/1:7,0:7:10.38:28,10,0	1/1:3,10:13:30.10:397,30,0	1/1:11,18:29:72.54:856,73,0	1/1:2,6:8:18.02:224,18,0	1/1:22,0:22:50.45:362,50,0	1/1:28,1:29:60.68:351,61,0	1/1:30,0:30:33.32:218,33,0	1/1:24,2:26:32.34:267,32,0
chr10	110482791	.	TA	T	1341.37	PASS	AB=0.970;AC=12;AF=0.214;AN=56;BaseQRankSum=-2.456;DP=628;FS=3.054;HRun=13;HaplotypeScore=114.6565;InbreedingCoeff=0.5618;MQ=73.62;MQ0=2;MQRankSum=-0.852;QD=6.54;ReadPosRankSum=-0.635;VQSLOD=2.5556;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:15.29:15,0,130	0/0:13,0:15:35.72:0,36,314	0/0:27,0:20:24.03:0,24,188	0/0:11,0:8:9.36:0,9,94	1/1:5,24:31:75.61:536,76,0	1/1:3,14:17:38.74:284,39,0	1/1:0,17:17:44.74:328,45,0	0/1:41,2:42:69.09:69,0,196	0/0:11,0:11:28.98:0,29,162	0/0:17,0:17:43.88:0,44,409	0/0:23,0:23:36.41:0,36,413	0/0:26,0:28:58.51:0,59,361	0/0:17,0:19:35.16:0,35,227	0/0:22,0:23:55.78:0,56,350	0/0:23,0:24:53.10:0,53,349	0/0:34,4:38:43.43:0,43,714	0/1:22,1:23:0.82:1,0,209	0/0:23,0:23:46.34:0,46,254	0/0:26,1:26:14.94:0,15,198	0/0:25,0:25:54.90:0,55,297	0/0:8,0:8:3.72:0,4,86	0/0:14,0:15:41.84:0,42,290	0/0:29,0:29:40.64:0,41,355	0/0:8,0:8:20.78:0,21,147	1/1:6,19:25:37.87:272,38,0	0/0:29,0:29:2.90:0,3,198	0/1:29,1:30:0.33:0,0,251	0/0:22,1:23:2.67:0,3,208
chr10	110484535	.	GA	G	3645.55	PASS	AB=0.809;AC=24;AF=0.429;AN=56;BaseQRankSum=12.137;DP=635;FS=5.784;HRun=12;HaplotypeScore=83.5277;InbreedingCoeff=0.6231;MQ=72.50;MQ0=0;MQRankSum=-4.172;QD=12.19;ReadPosRankSum=1.781;VQSLOD=3.6842;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,18:27:49.83:377,50,0	0/1:12,2:14:4.39:4,0,323	0/0:17,1:20:1.66:0,2,182	0/0:12,0:12:0.24:0,0,114	0/0:29,4:34:1.50:0,1,561	0/1:18,3:21:18.61:19,0,375	0/0:23,1:25:42.73:0,43,600	1/1:10,29:40:53.19:596,53,0	1/1:6,11:18:34.85:261,35,0	0/0:29,1:30:51.87:0,52,684	0/0:18,2:21:7.45:0,7,413	0/0:20,1:22:27.67:0,28,428	0/0:20,1:22:21.67:0,22,378	0/1:19,3:22:18.62:19,0,369	0/0:28,2:31:28.51:0,29,638	0/0:35,0:37:89.94:0,90,880	1/1:3,11:14:26.86:209,27,0	1/1:2,6:8:17.93:139,18,0	1/1:10,7:17:32.84:254,33,0	1/1:4,23:28:64.75:493,65,0	0/1:7,12:20:53.44:177,0,53	0/0:21,2:23:33.85:0,34,513	0/0:14,1:16:15.67:0,16,321	0/0:24,0:24:66:0,66,627	0/0:18,0:19:47.22:0,47,487	1/1:12,16:29:46.79:354,47,0	1/1:4,23:30:74.83:552,75,0	1/1:2,8:11:25.93:192,26,0
chr10	110484583	.	TTGG	T	7660.71	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=13.736;DP=517;FS=11.900;HRun=0;HaplotypeScore=86.3972;InbreedingCoeff=0.9965;MQ=85.38;MQ0=0;MQRankSum=-7.669;QD=40.11;ReadPosRankSum=-0.906;VQSLOD=5.4083;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,7:12:21.03:303,21,0	0/0:12,0:12:33.11:0,33,726	0/0:21,0:21:60.20:0,60,1290	0/0:15,0:15:42.14:0,42,909	0/0:21,0:21:57.18:0,57,1206	0/0:12,0:12:36.12:0,36,763	0/0:13,0:13:39.13:0,39,842	1/1:5,19:24:66.23:1097,66,0	1/1:6,11:17:36.12:597,36,0	0/0:18,0:18:51.18:0,51,1129	0/0:13,0:13:27.09:0,27,575	0/0:26,0:26:78.27:0,78,1730	0/0:23,0:23:69.24:0,69,1553	0/0:22,0:22:66.23:0,66,1477	0/0:28,0:28:81.28:0,81,1836	0/0:35,0:35:99:0,102,2255	1/1:1,22:23:54.60:844,55,0	1/1:1,6:7:15.05:250,15,0	1/1:0,12:12:36.12:592,36,0	1/1:3,17:20:54.14:853,54,0	1/1:1,14:15:38.81:565,39,0	0/0:18,0:18:48.16:0,48,1085	0/0:12,0:12:33.10:0,33,703	0/0:22,0:22:60.21:0,60,1360	0/0:15,0:15:42.14:0,42,912	1/1:5,16:21:57.19:942,57,0	1/1:2,28:30:78.18:1217,78,0	1/1:1,8:10:24.08:399,24,0
chr10	110486576	.	ACAGC	A	10968.57	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.643;DP=601;FS=0.323;HRun=0;HaplotypeScore=119.6424;InbreedingCoeff=0.9998;MQ=77.31;MQ0=0;MQRankSum=-12.657;QD=44.23;ReadPosRankSum=1.244;VQSLOD=5.4593;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:30:69.71:1336,70,0	0/0:13,0:13:39.08:0,39,827	0/0:20,0:19:57.14:0,57,1299	0/0:24,0:22:63.01:0,63,1275	0/0:13,0:13:39.13:0,39,1033	0/0:18,0:18:54.19:0,54,1425	0/0:30,0:30:90.24:0,90,2035	1/1:2,22:24:63.15:1109,63,0	1/1:2,17:19:48.16:901,48,0	0/0:17,0:17:51.17:0,51,1357	0/0:11,0:11:33.11:0,33,843	0/0:37,0:37:99:0,111,2984	0/0:19,0:19:54.17:0,54,1421	0/0:28,0:28:81.28:0,81,2217	0/0:26,0:26:78.27:0,78,2071	0/0:19,0:19:57.17:0,57,1434	1/1:5,21:26:66.09:1122,66,0	1/1:3,32:35:96.15:1735,96,0	1/1:1,17:18:48.11:788,48,0	1/1:3,12:15:29.96:456,30,0	1/1:7,28:35:63.15:1110,63,0	0/0:12,0:12:33.10:0,33,847	0/0:19,0:19:54.05:0,54,1203	0/0:34,0:34:99:0,102,2705	0/0:13,0:13:39.13:0,39,1035	1/1:4,16:20:60.20:1119,60,0	1/1:1,14:15:39.13:755,39,0	1/1:3,8:11:33.06:537,33,0
chr10	110486578	.	AGC	A	3985.22	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=17.722;DP=600;FS=1.063;HRun=0;HaplotypeScore=121.6724;InbreedingCoeff=0.9993;MQ=77.96;MQ0=0;MQRankSum=-11.077;QD=16.27;ReadPosRankSum=3.007;VQSLOD=3.6073;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,1:31:68.73:461,69,0	0/0:13,0:13:39.13:0,39,705	0/0:20,0:19:57.06:0,57,1063	0/0:25,0:23:54.08:0,54,1043	0/0:14,0:14:42.14:0,42,829	0/0:18,0:18:54.19:0,54,1073	0/0:30,0:30:90.31:0,90,1695	1/1:23,0:23:55.43:408,55,0	1/1:17,1:18:47.54:343,48,0	0/0:18,0:18:51.17:0,51,1010	0/0:11,0:11:33.11:0,33,658	0/0:37,0:37:99:0,111,2242	0/0:18,0:18:54.19:0,54,1084	0/0:27,0:27:81.28:0,81,1645	0/0:27,0:27:81.27:0,81,1588	0/0:19,0:19:57.17:0,57,1086	1/1:24,0:24:54.60:361,55,0	1/1:34,1:35:86.32:616,86,0	1/1:17,0:17:44.55:378,45,0	1/1:16,0:16:24.93:224,25,0	1/1:33,2:35:53.10:414,53,0	0/0:12,0:12:33.10:0,33,636	0/0:18,0:18:52.06:0,52,977	0/0:34,0:34:99:0,102,2048	0/0:14,0:14:42.13:0,42,815	1/1:20,0:20:57.61:367,58,0	1/1:14,1:15:38.54:254,39,0	1/1:11,0:11:23.80:160,24,0
chr10	110486634	.	TCCCCG	T	8850.10	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=15.203;DP=546;FS=7.351;HRun=0;HaplotypeScore=124.7395;InbreedingCoeff=0.9419;MQ=68.67;MQ0=0;MQRankSum=-10.867;QD=36.72;ReadPosRankSum=6.230;VQSLOD=3.6943;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:39.13:785,39,0	0/0:7,0:7:21:0,21,485	0/1:10,0:10:0.44:0,0,502	0/0:10,0:10:26.12:0,26,610	0/0:12,0:12:32.98:0,33,669	0/0:18,0:18:48.16:0,48,1331	0/0:37,0:37:99:0,111,3307	1/1:2,14:16:39.13:822,39,0	1/1:2,8:10:24.07:456,24,0	0/0:15,0:15:42.14:0,42,1162	0/0:8,0:8:24.08:0,24,625	0/0:34,0:34:99:0,99,2719	0/0:18,0:18:54.19:0,54,1445	0/0:30,0:30:87.28:0,87,2411	0/0:31,0:31:90.27:0,90,2598	0/0:19,0:19:57.19:0,57,1618	1/1:3,20:23:51.16:1066,51,0	1/1:4,31:35:78.11:1605,78,0	1/1:0,14:14:33.09:651,33,0	1/1:1,11:12:6.02:130,6,0	1/1:6,27:34:20.92:425,21,0	0/0:7,0:7:21.07:0,21,572	0/0:10,0:10:18.10:0,18,416	0/0:36,0:36:99:0,105,3166	0/0:13,0:13:36.12:0,36,937	1/1:0,23:23:69.24:1483,69,0	1/1:1,21:22:45.14:905,45,0	1/1:1,12:13:24.08:521,24,0
chr10	110486907	.	TC	T	12020.49	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.164;DP=857;FS=1.115;HRun=2;HaplotypeScore=83.3439;InbreedingCoeff=0.9998;MQ=79.78;MQ0=0;MQRankSum=-3.753;QD=36.32;ReadPosRankSum=1.605;VQSLOD=5.4167;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,45:46:99:1713,132,0	0/0:19,0:19:57.19:0,57,852	0/0:22,0:22:53.18:0,53,786	0/0:26,1:23:48.51:0,49,773	0/0:26,0:26:78.26:0,78,1160	0/0:27,0:27:81.25:0,81,1189	0/0:33,0:33:93.29:0,93,1352	1/1:2,27:29:81.25:1037,81,0	1/1:0,30:30:81.26:1048,81,0	0/0:28,0:28:84.27:0,84,1214	0/0:21,0:21:63.20:0,63,911	0/0:56,0:56:99:0,169,2489	0/0:38,0:38:99:0,111,1626	0/0:31,0:31:93.32:0,93,1394	0/0:47,0:47:99:0,135,2001	0/0:53,1:54:99:0,121,2279	1/1:0,37:37:99:1401,108,0	1/1:0,28:28:81.24:1035,81,0	1/1:1,24:25:72.23:933,72,0	1/1:0,18:18:51.17:662,51,0	1/1:0,47:47:99:1675,129,0	0/0:16,0:16:45.14:0,45,650	0/0:16,0:16:48.15:0,48,698	0/0:41,0:41:99:0,120,1792	0/0:24,0:24:69.23:0,69,1032	1/1:1,27:28:81.25:1037,81,0	1/1:0,34:34:87.28:1129,87,0	1/1:0,9:9:27.09:350,27,0
chr10	110488345	.	AAACC	A	3914.67	PASS	AB=0.994;AC=32;AF=0.571;AN=56;BaseQRankSum=4.471;DP=495;FS=14.594;HRun=0;HaplotypeScore=106.4187;InbreedingCoeff=0.0850;MQ=48.91;MQ0=22;MQRankSum=-5.185;QD=10.52;ReadPosRankSum=-4.552;VQSLOD=0.4729;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:13:24.02:283,24,0	0/0:5,0:5:9.92:0,10,187	0/1:59,0:18:8.12:8,0,343	0/0:53,0:7:7.70:0,8,54	0/1:31,0:31:63.82:64,0,216	0/1:14,0:14:52.34:52,0,144	0/0:9,0:8:4.74:0,5,70	1/1:14,1:14:27.23:226,27,0	1/1:12,0:12:24:256,24,0	0/0:7,0:7:20.85:0,21,347	0/0:27,0:27:56.24:0,56,1033	0/1:12,0:12:84.51:108,0,85	0/1:18,0:17:99:150,0,241	0/1:12,0:12:52.63:167,0,53	0/1:22,0:22:99:189,0,201	0/0:22,0:21:55.66:0,56,1048	1/1:20,0:19:43.90:440,44,0	1/1:14,0:13:11.93:105,12,0	1/1:10,1:10:24.02:294,24,0	1/1:20,1:20:44.98:504,45,0	1/1:1,0:1:3.01:38,3,0	0/1:12,0:11:44.73:45,0,167	0/1:15,0:15:14.94:15,0,184	0/1:10,0:9:25.76:26,0,58	0/1:13,0:12:7.20:7,0,172	0/1:12,1:13:28.45:358,0,28	1/1:16,0:16:32.63:357,33,0	1/1:16,0:15:24.72:222,25,0
chr10	110488346	.	AACC	A	4720.75	PASS	AB=0.974;AC=32;AF=0.571;AN=56;BaseQRankSum=3.180;DP=494;FS=16.148;HRun=0;HaplotypeScore=96.4803;InbreedingCoeff=0.0695;MQ=48.72;MQ0=23;MQRankSum=-5.832;QD=12.76;ReadPosRankSum=-4.336;VQSLOD=2.4989;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,5:13:24.08:311,24,0	0/0:5,0:5:9.50:0,10,157	0/1:62,0:18:10.09:10,0,311	0/0:54,0:7:6.53:0,7,38	0/1:31,0:31:95.21:95,0,135	0/1:13,0:13:76.21:76,0,101	0/0:9,0:8:4.53:0,5,50	1/1:7,7:14:27.56:387,28,0	1/1:7,5:12:24.06:292,24,0	0/0:7,0:7:15.89:0,16,269	0/0:27,0:27:53.57:0,54,843	0/1:12,0:12:33.22:115,0,33	0/1:18,0:17:99:159,0,144	0/1:12,0:12:38.45:181,0,38	0/1:21,0:21:99:196,0,107	0/0:22,0:21:40.67:0,41,869	1/1:13,7:19:44.17:562,44,0	1/1:4,10:13:12.04:161,12,0	1/1:7,4:10:24.06:289,24,0	1/1:13,8:20:45.14:586,45,0	1/1:1,0:1:3.01:38,3,0	0/1:12,0:11:45.24:45,0,118	0/1:15,0:15:22.16:22,0,107	0/1:9,0:8:25.73:26,0,37	0/1:12,0:11:10.38:10,0,102	0/1:7,6:13:14.37:394,0,14	1/1:9,7:16:32.77:431,33,0	1/1:12,4:15:27.05:333,27,0
chr10	110488347	.	ACC	A	4466.53	PASS	AB=0.830;AC=33;AF=0.589;AN=56;BaseQRankSum=4.299;DP=467;FS=5.081;HRun=2;HaplotypeScore=86.5211;InbreedingCoeff=0.0525;MQ=49.34;MQ0=23;MQRankSum=-6.636;QD=11.14;ReadPosRankSum=-2.919;VQSLOD=0.8124;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,7:12:24.07:292,24,0	0/0:5,0:5:9.50:0,10,142	0/1:63,1:18:21.24:21,0,306	0/1:55,0:7:1.19:1,0,22	0/1:11,1:25:61.40:102,0,61	0/1:11,1:13:47.65:81,0,48	0/0:5,0:5:2.85:0,3,17	1/1:8,1:10:27.50:267,27,0	1/1:6,5:11:24.04:269,24,0	0/0:8,0:8:18.41:0,18,225	0/0:23,2:25:42.09:0,42,661	0/1:11,1:12:8.81:144,0,9	0/1:10,7:16:63.50:162,0,63	0/1:7,5:12:11.20:205,0,11	0/1:13,7:20:12.29:245,0,12	0/0:22,0:21:39.64:0,40,731	1/1:8,11:19:43.66:502,44,0	1/1:10,2:12:12.02:123,12,0	1/1:9,1:9:24:254,24,0	1/1:9,8:18:45.10:524,45,0	1/1:0,1:1:3.01:38,3,0	0/1:8,1:10:61.24:61,0,61	0/1:14,1:15:38.79:60,0,39	0/1:8,1:8:14.91:36,0,15	0/1:9,1:10:36.46:36,0,40	0/1:8,4:12:2.74:349,0,3	1/1:7,7:15:32.73:412,33,0	1/1:6,5:12:26.75:280,27,0
chr10	110489680	.	TA	T	5626.18	PASS	AB=0.833;AC=31;AF=0.554;AN=56;BaseQRankSum=8.426;DP=431;FS=4.799;HRun=10;HaplotypeScore=45.5497;InbreedingCoeff=0.8194;MQ=70.35;MQ0=1;MQRankSum=-1.499;QD=19.60;ReadPosRankSum=2.250;VQSLOD=5.6011;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:22:50.99:443,51,0	0/0:12,0:12:21.04:0,21,223	0/0:16,0:13:1.21:0,1,62	0/0:15,1:9:15.18:0,15,141	1/1:4,23:27:62.90:534,63,0	1/1:1,14:15:32.96:280,33,0	1/1:1,3:4:8.99:78,9,0	1/1:7,31:38:86.95:755,87,0	1/1:2,6:8:12:104,12,0	0/0:11,0:11:4.16:0,4,273	0/0:9,0:9:27.07:0,27,299	0/0:17,0:17:38.83:0,39,401	0/0:7,0:7:12.03:0,12,133	0/0:7,1:8:0.66:0,1,208	0/0:12,0:12:27.07:0,27,299	0/0:12,0:12:30.08:0,30,332	1/1:3,17:20:44.99:391,45,0	1/1:3,24:27:62.98:547,63,0	1/1:3,13:17:41.03:344,41,0	1/1:1,9:10:23.99:208,24,0	1/1:1,5:6:12:104,12,0	0/0:8,0:8:21.03:0,21,215	0/0:15,0:16:38.68:0,39,403	0/1:4,1:5:13.82:14,0,88	1/1:2,17:19:51.88:445,52,0	1/1:4,22:26:35.80:540,36,0	1/1:3,26:30:70.91:605,71,0	1/1:4,9:13:26.99:234,27,0
chr10	110491719	.	TCCCC	T	6314.32	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=11.258;DP=246;FS=6.532;HRun=4;HaplotypeScore=111.8229;InbreedingCoeff=0.8432;MQ=45.47;MQ0=31;MQRankSum=-9.686;QD=40.22;ReadPosRankSum=2.837;VQSLOD=2.0887;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:12:36.12:666,36,0	0/0:12,0:12:33.11:0,33,945	0/0:10,0:8:21.07:0,21,605	0/0:16,0:13:21.89:0,22,827	1/1:3,8:8:24.08:442,24,0	1/1:1,6:6:18.06:339,18,0	1/1:1,5:5:15.05:279,15,0	1/1:0,2:2:6.02:116,6,0	1/1:0,6:6:18.06:334,18,0	0/0:15,0:14:42.14:0,42,1219	0/0:18,0:17:40.84:0,41,1145	1/1:1,6:6:18.06:339,18,0	1/1:1,7:7:21.07:395,21,0	1/1:1,4:4:12.04:223,12,0	1/1:1,7:7:21.07:392,21,0	0/0:18,0:18:48.16:0,48,1348	1/1:5,8:8:14.55:380,15,0	1/1:4,4:4:12.04:231,12,0	1/1:1,1:1:3.01:58,3,0	1/1:3,2:5:6.02:114,6,0	1/1:3,7:7:21.07:388,21,0	1/1:0,5:5:15.05:278,15,0	1/1:8,6:13:18.06:331,18,0	1/1:3,8:8:15.05:275,15,0	1/1:0,3:3:9.03:169,9,0	1/1:0,5:5:15.05:289,15,0	1/1:1,4:4:12.04:220,12,0	1/1:1,1:1:3.01:58,3,0
chr10	110491722	.	CCAGCCCCT	C	7567.73	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=11.434;DP=245;FS=4.292;HRun=0;HaplotypeScore=125.4189;InbreedingCoeff=0.8597;MQ=49.22;MQ0=25;MQRankSum=-10.041;QD=49.14;ReadPosRankSum=2.985;VQSLOD=4.3396;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:12:36.12:790,36,0	0/0:12,0:12:33.11:0,33,1416	0/0:10,0:8:24.04:0,24,965	0/0:17,0:15:45.01:0,45,1536	1/1:11,0:8:24.08:517,24,0	1/1:7,0:6:18.06:394,18,0	1/1:6,0:5:15.05:330,15,0	1/1:2,0:2:6.02:142,6,0	1/1:6,0:6:18.06:379,18,0	0/0:16,0:15:45.15:0,45,1907	0/0:16,0:16:38.28:0,38,1771	1/1:7,0:6:18.06:404,18,0	1/1:9,0:8:24.08:521,24,0	1/1:4,0:4:12.04:262,12,0	1/1:7,0:7:21.07:462,21,0	0/0:19,0:19:48.16:0,48,2134	1/1:13,0:8:21.07:461,21,0	1/1:8,0:4:12.04:294,12,0	1/1:2,0:1:3.01:72,3,0	1/1:2,4:6:11.95:174,12,0	1/1:10,0:7:21.07:456,21,0	1/1:5,0:5:15.05:326,15,0	1/1:6,7:13:18.53:380,19,0	1/1:9,0:8:15.05:317,15,0	1/1:3,0:3:9.03:200,9,0	1/1:5,0:5:15.05:352,15,0	1/1:5,0:4:12.04:265,12,0	1/1:2,0:1:3.01:70,3,0
chr10	110491728	.	CCT	C	4789.53	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=10.080;DP=363;FS=5.464;HRun=0;HaplotypeScore=137.3038;InbreedingCoeff=0.8523;MQ=51.07;MQ0=21;MQRankSum=-9.997;QD=18.21;ReadPosRankSum=2.847;VQSLOD=5.0104;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:23:53.91:498,54,0	0/0:11,0:11:30.10:0,30,603	0/0:12,0:10:30.06:0,30,543	0/0:21,0:18:47.73:0,48,792	1/1:15,0:12:24.06:248,24,0	1/1:10,0:9:20.98:206,21,0	1/1:10,0:9:20.93:191,21,0	1/1:12,0:12:35.76:273,36,0	1/1:15,0:15:38.89:345,39,0	0/0:18,0:17:51.12:0,51,930	0/0:17,0:17:43.90:0,44,871	1/1:16,0:15:32.96:306,33,0	1/1:12,0:11:23.97:235,24,0	1/1:12,0:12:20.93:189,21,0	1/1:17,0:17:33:317,33,0	0/0:21,0:21:57.16:0,57,1046	1/1:19,0:15:32.90:295,33,0	1/1:9,0:6:17.99:165,18,0	1/1:3,0:2:6.01:58,6,0	1/1:6,0:6:11.95:103,12,0	1/1:11,0:9:21.05:216,21,0	1/1:5,6:11:15.03:155,15,0	1/1:13,0:13:18.04:183,18,0	1/1:14,0:13:20.96:198,21,0	1/1:7,0:7:15.02:147,15,0	0/1:11,0:11:9.98:155,0,10	1/1:12,0:11:29.89:250,30,0	1/1:3,0:2:6:55,6,0
chr10	110491729	.	CT	C	5380.15	PASS	AB=0.524;AC=43;AF=0.768;AN=56;BaseQRankSum=9.861;DP=366;FS=7.405;HRun=1;HaplotypeScore=131.6377;InbreedingCoeff=0.8466;MQ=51.53;MQ0=17;MQRankSum=-10.000;QD=20.38;ReadPosRankSum=2.861;VQSLOD=4.7948;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,12:23:53.93:540,54,0	0/0:11,0:11:30.10:0,30,473	0/0:12,0:10:30.04:0,30,412	0/0:21,0:18:47.14:0,47,655	1/1:1,13:13:24.07:275,24,0	1/1:4,6:10:23.99:255,24,0	1/1:5,5:9:20.94:211,21,0	1/1:0,12:12:35.76:285,36,0	1/1:9,6:15:38.91:366,39,0	0/0:18,0:17:48.15:0,48,729	0/0:17,0:17:44.23:0,44,671	1/1:11,6:16:35.97:356,36,0	1/1:1,11:11:24.07:277,24,0	1/1:9,4:13:23.93:228,24,0	1/1:10,7:17:33.01:343,33,0	0/0:23,0:23:63.15:0,63,883	1/1:10,8:15:32.92:323,33,0	1/1:5,4:6:18:190,18,0	1/1:2,1:2:6.01:64,6,0	1/1:4,2:6:11.95:112,12,0	1/1:3,7:9:21.06:243,21,0	1/1:6,5:11:15.04:173,15,0	1/1:7,6:13:18.05:205,18,0	1/1:6,8:13:20.96:214,21,0	1/1:5,3:8:18.03:185,18,0	0/1:1,10:11:23.92:183,0,24	1/1:8,4:12:32.90:291,33,0	1/1:1,1:2:6:60,6,0
chr10	110496819	.	T	TA	19157.13	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-13.022;DP=726;FS=8.337;HRun=7;HaplotypeScore=60.7376;InbreedingCoeff=0.9832;MQ=72.87;MQ0=0;MQRankSum=-2.110;QD=31.77;ReadPosRankSum=1.506;VQSLOD=4.7319;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,38:41:99:1305,108,0	0/0:6,0:6:18.03:0,18,174	0/0:15,0:14:30.02:0,30,281	0/0:11,0:11:7.88:0,8,100	1/1:3,41:44:99:1450,120,0	1/1:2,16:18:48.15:580,48,0	1/1:2,20:22:57.17:689,57,0	1/1:5,21:26:63.19:761,63,0	1/1:3,26:29:75.23:906,75,0	0/0:33,0:33:90.13:0,90,866	0/0:16,0:16:42.05:0,42,399	1/1:1,29:30:81.25:979,81,0	1/1:6,26:32:75.23:905,75,0	1/1:3,34:37:96.29:1160,96,0	1/1:3,31:34:87.27:1051,87,0	0/0:42,0:42:99:0,114,1095	1/1:2,28:31:81.23:966,81,0	1/1:0,17:17:51.16:616,51,0	1/1:5,14:18:42.13:507,42,0	1/1:4,28:32:81.25:978,81,0	1/1:0,14:14:36.11:435,36,0	1/1:1,24:25:69.21:834,69,0	1/1:1,23:24:69.21:833,69,0	1/1:0,16:16:48.15:580,48,0	1/1:0,27:27:72.22:870,72,0	1/1:1,33:34:99:1196,99,0	1/1:1,34:35:89.68:1087,90,0	1/1:1,15:16:39.12:471,39,0
chr10	110498855	.	AACAC	A	10115.52	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=9.620;DP=599;FS=3.657;HRun=0;HaplotypeScore=128.8118;InbreedingCoeff=0.9461;MQ=61.96;MQ0=3;MQRankSum=-6.243;QD=22.04;ReadPosRankSum=3.676;VQSLOD=4.5493;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,1:40:56.97:540,57,0	0/0:13,0:13:30.03:0,30,619	0/0:40,0:27:38.08:0,38,729	0/0:24,0:15:15.03:0,15,239	1/1:3,14:17:36.12:594,36,0	1/1:2,21:23:45.15:743,45,0	1/1:12,18:31:15.56:518,16,0	1/1:11,0:22:28.75:255,29,0	1/1:5,0:24:54.06:503,54,0	0/0:31,0:33:77.53:0,78,1645	0/0:15,0:15:33.11:0,33,806	1/1:5,20:26:63.21:1018,63,0	1/1:2,14:16:39.13:643,39,0	1/1:5,20:25:48.16:793,48,0	1/1:6,13:19:11.76:521,12,0	0/0:15,0:15:30.09:0,30,657	1/1:11,0:23:30.03:280,30,0	1/1:8,0:18:27.03:252,27,0	1/1:4,0:16:27.03:252,27,0	1/1:5,0:17:24.03:224,24,0	1/1:8,0:18:16.81:138,17,0	1/1:2,17:19:45.15:741,45,0	1/1:3,12:16:23.82:374,24,0	1/1:13,14:27:39.13:644,39,0	1/1:0,8:8:15.05:248,15,0	1/1:8,0:27:39.03:361,39,0	1/1:7,0:25:48.05:447,48,0	1/1:0,0:2:3:28,3,0
chr10	110502473	.	C	CT	5988.74	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-13.609;DP=600;FS=22.930;HRun=9;HaplotypeScore=54.9160;InbreedingCoeff=0.9554;MQ=76.17;MQ0=0;MQRankSum=-0.747;QD=22.51;ReadPosRankSum=0.352;VQSLOD=3.4255;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,21:27:8.05:545,8,0	0/0:11,0:11:26.98:0,27,234	0/0:12,0:13:23.99:0,24,207	0/0:20,0:21:39.58:0,40,306	0/0:29,1:30:47.80:0,48,644	0/0:25,0:25:71.99:0,72,625	0/0:15,0:15:38.99:0,39,338	1/1:9,22:32:66:702,66,0	1/1:1,12:13:1.02:239,1,0	0/0:19,0:19:50.98:0,51,440	0/0:21,0:21:56.97:0,57,491	0/0:29,0:29:68.95:0,69,594	0/0:12,0:12:32.99:0,33,286	0/0:25,0:25:65.98:0,66,573	0/0:28,0:28:71.95:0,72,621	0/0:14,0:14:38.99:0,39,339	1/1:1,15:17:38.94:412,39,0	1/1:1,21:23:24.91:486,25,0	1/1:7,21:29:66.01:711,66,0	1/1:5,20:25:54.11:584,54,0	1/1:6,19:25:31.10:571,31,0	0/0:20,0:20:53.99:0,54,469	0/0:24,0:24:68.98:0,69,599	0/0:9,0:9:26.99:0,27,234	0/0:18,0:18:47.99:0,48,417	1/1:5,17:22:51.14:564,51,0	1/1:6,30:36:66.18:728,66,0	1/1:3,13:17:41.95:445,42,0
chr10	110503581	.	AT	A	2940.69	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=5.759;DP=738;FS=3.501;HRun=12;HaplotypeScore=82.3624;InbreedingCoeff=0.9802;MQ=71.82;MQ0=0;MQRankSum=-0.992;QD=16.61;ReadPosRankSum=2.201;VQSLOD=4.8281;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,102,1164	0/0:10,0:10:27.04:0,27,268	0/0:18,0:15:12.80:0,13,165	0/0:12,0:12:8.29:0,8,72	0/0:8,0:31:64.06:0,64,343	0/0:5,0:21:51.59:0,52,289	0/0:7,0:27:54.30:0,54,305	0/0:24,0:25:41.91:0,42,405	0/0:22,1:23:33.86:0,34,512	0/0:31,2:34:16.47:0,16,509	0/0:21,1:22:30.84:0,31,485	1/1:5,25:30:68.72:534,69,0	1/1:1,12:13:32.87:255,33,0	1/1:4,20:24:53.77:418,54,0	1/1:4,37:41:81.53:766,82,0	0/0:39,1:40:72.92:0,73,904	0/0:23,0:23:60.12:0,60,609	0/0:24,0:24:63.08:0,63,616	0/0:32,2:34:31.63:0,32,655	0/0:28,1:31:57.71:0,58,734	0/0:30,0:30:69.13:0,69,695	1/1:3,23:26:29.42:411,29,0	1/1:2,11:13:29.88:232,30,0	1/1:5,23:30:69.78:523,70,0	0/0:10,0:30:60.22:0,60,335	0/0:33,2:36:34.37:0,34,672	0/0:31,0:32:71.92:0,72,688	0/0:11,0:11:27.04:0,27,268
chr10	110504064	.	G	GT	984.77	PASS	AB=0.899;AC=35;AF=0.625;AN=56;BaseQRankSum=5.332;DP=436;FS=0.622;HRun=15;HaplotypeScore=78.7172;InbreedingCoeff=0.4530;MQ=61.90;MQ0=4;MQRankSum=-3.468;QD=2.95;ReadPosRankSum=-2.083;VQSLOD=-0.3373;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:28:11.92:56,12,0	0/0:6,0:7:13.79:0,14,78	1/1:12,0:5:2.68:11,3,0	0/1:13,0:8:0.95:1,0,26	1/1:13,11:25:2.30:184,2,0	1/1:2,16:18:8.80:172,9,0	0/1:8,5:13:6.03:64,0,6	1/1:20,0:20:8.65:68,9,0	1/1:10,0:10:6.12:25,6,0	0/1:13,0:13:7.34:7,0,59	0/1:13,1:15:10.21:10,0,45	0/0:12,0:13:8.64:0,9,32	0/1:9,0:9:5.21:5,0,47	0/1:9,0:9:0.46:0,0,5	0/0:18,0:17:21.73:0,22,119	0/0:8,0:8:13.90:0,14,77	1/1:18,0:32:14.84:78,15,0	1/1:14,0:13:12.01:61,12,0	1/1:18,0:18:14.31:82,14,0	1/1:9,0:15:6.36:37,6,0	1/1:6,0:8:5.83:33,6,0	0/0:9,0:9:17.33:0,17,101	0/0:15,0:15:12.98:0,13,76	0/0:31,1:32:15.45:0,15,181	0/1:5,7:11:22.43:24,0,22	1/1:19,0:19:16.85:81,17,0	1/1:20,0:20:18.90:110,19,0	1/1:8,0:8:9.33:59,9,0
chr10	110507070	.	C	CGAAG	9507.77	PASS	AB=0.765;AC=16;AF=0.286;AN=56;BaseQRankSum=1.292;DP=658;FS=2.452;HRun=0;HaplotypeScore=188.7821;InbreedingCoeff=-0.3988;MQ=53.69;MQ0=4;MQRankSum=-6.645;QD=24.01;ReadPosRankSum=-0.310;VQSLOD=4.8359;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:29,13:42:99:990,0,1068	0/0:9,0:9:27.09:0,27,566	0/0:34,0:19:54.18:0,54,1030	0/0:37,0:25:71.16:0,71,1254	0/1:14,8:22:99:414,0,335	0/1:14,9:23:99:865,0,606	0/1:14,4:18:99:408,0,516	0/1:17,7:24:99:599,0,613	0/1:19,15:34:99:1298,0,853	0/0:31,0:31:90.30:0,90,1849	0/0:22,0:22:66.23:0,66,1337	0/0:17,0:17:30.10:0,30,531	0/0:17,0:17:28.85:0,29,634	0/0:15,0:15:42.14:0,42,805	0/0:16,0:16:41.87:0,42,692	0/0:41,0:41:99:0,120,2467	0/1:18,6:24:99:676,0,409	0/1:15,1:15:41.48:41,0,770	0/1:14,7:21:99:438,0,659	0/1:12,4:16:99:278,0,519	0/1:42,14:52:99:924,0,926	0/1:15,0:14:13.37:13,0,670	0/0:10,0:10:26.32:0,26,446	0/0:13,0:13:27.09:0,27,542	0/1:11,6:17:99:461,0,577	0/1:18,14:31:99:871,0,879	0/1:16,12:28:99:999,0,563	0/1:1,3:4:50.25:233,0,50
chr10	110507079	.	ATCC	A	3486.63	PASS	AB=0.714;AC=13;AF=0.232;AN=56;BaseQRankSum=11.431;DP=653;FS=0.419;HRun=0;HaplotypeScore=195.2579;InbreedingCoeff=0.8616;MQ=47.22;MQ0=6;MQRankSum=-10.413;QD=38.31;ReadPosRankSum=3.860;VQSLOD=3.9948;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:80.33:0,80,1558	0/0:10,0:10:30.10:0,30,678	0/0:30,0:14:25.31:0,25,567	0/0:33,0:21:13.74:0,14,884	0/0:23,0:23:26.90:0,27,490	0/0:23,0:23:47.37:0,47,886	0/0:21,0:21:58.42:0,58,997	0/0:27,0:24:68.67:0,69,1089	0/0:37,0:37:58.19:0,58,1345	0/0:26,0:26:78.26:0,78,1678	0/0:23,0:23:69.22:0,69,1436	1/1:0,16:16:27.09:470,27,0	1/1:0,15:15:36.12:639,36,0	1/1:3,10:13:4.86:518,5,0	1/1:0,14:14:36.12:630,36,0	0/0:43,0:43:99:0,129,2622	0/0:22,0:22:41.97:0,42,653	0/0:17,0:16:46.97:0,47,860	0/0:22,0:20:54.18:0,54,952	0/0:18,0:18:30.40:0,30,696	0/0:58,0:55:99:0,106,1715	1/1:2,12:13:35.91:477,36,0	1/1:2,7:9:26.98:409,27,0	0/1:6,4:10:13.62:343,0,14	0/0:19,0:19:42.52:0,43,862	0/0:36,0:35:85.20:0,85,1464	0/0:26,0:26:42.82:0,43,901	0/0:4,0:4:8.60:0,9,90
chr10	110507081	.	CCAT	C	3696.91	PASS	AB=0.965;AC=25;AF=0.446;AN=56;BaseQRankSum=16.052;DP=638;FS=0.355;HRun=0;HaplotypeScore=188.7540;InbreedingCoeff=0.0361;MQ=47.38;MQ0=6;MQRankSum=-10.352;QD=8.80;ReadPosRankSum=1.549;VQSLOD=3.2152;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:41,2:43:99:176,0,1166	0/0:10,0:10:27.09:0,27,547	0/0:29,0:13:9.11:0,9,303	0/1:29,1:20:12.24:12,0,513	0/0:22,0:22:26.68:0,27,461	0/1:20,1:21:99:136,0,581	0/0:22,0:22:38.92:0,39,802	0/0:26,0:23:3.72:0,4,703	0/1:36,1:37:99:397,0,1001	0/0:25,0:25:69.23:0,69,1398	0/0:21,0:21:63.21:0,63,1262	1/1:16,0:16:27.02:290,27,0	1/1:15,0:15:36.09:397,36,0	0/1:13,0:13:29.28:271,0,29	1/1:14,0:14:36.05:390,36,0	0/0:40,0:40:99:0,117,2271	0/1:20,1:21:99:130,0,502	0/1:19,0:18:25.02:25,0,722	0/0:23,0:21:46.28:0,46,722	0/1:18,0:18:32.56:33,0,621	0/1:54,4:55:30.01:30,0,1284	1/1:14,0:13:21.06:244,21,0	1/1:8,0:8:23.99:249,24,0	1/1:9,0:9:21.01:219,21,0	0/1:15,1:16:96.66:97,0,698	0/1:33,4:36:99:291,0,1179	0/1:26,1:27:99:219,0,678	0/1:4,0:4:54.85:91,0,55
chr10	110507084	.	T	TC	3631.70	PASS	AB=0.839;AC=25;AF=0.446;AN=56;BaseQRankSum=16.004;DP=620;FS=1.148;HRun=1;HaplotypeScore=166.5491;InbreedingCoeff=0.0886;MQ=46.50;MQ0=6;MQRankSum=-11.402;QD=9.03;ReadPosRankSum=-0.166;VQSLOD=1.0510;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,9:40:99:187,0,793	0/0:10,0:10:27.09:0,27,351	0/0:25,0:11:9.11:0,9,237	0/0:30,1:21:21.06:0,21,500	0/0:16,7:23:27.09:0,27,350	0/1:16,4:20:99:159,0,364	0/0:21,1:22:42.26:0,42,633	0/1:24,1:23:2.12:2,0,596	0/1:24,13:37:99:516,0,638	0/0:25,0:25:72.23:0,72,923	0/0:22,0:22:63.20:0,63,811	1/1:14,0:14:23.87:197,24,0	1/1:12,0:12:31.33:226,31,0	0/1:12,0:12:6.59:236,0,7	1/1:14,0:14:31.39:234,31,0	0/0:40,0:40:99:0,117,1519	0/1:18,3:21:99:151,0,400	0/1:16,3:18:74.75:75,0,530	0/0:19,1:19:28.67:0,29,626	0/1:13,3:16:26.80:27,0,425	0/1:53,3:53:36.55:37,0,1076	1/1:12,1:12:20.40:208,20,0	1/1:7,1:8:16.58:208,17,0	1/1:4,5:9:20.25:195,20,0	0/1:13,3:16:99:129,0,419	0/1:28,8:35:99:318,0,794	0/1:16,12:28:99:398,0,432	0/1:3,3:6:23.88:130,0,24
chr10	110507089	.	CATCCATCT	C	3594.10	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=12.960;DP=616;FS=2.026;HRun=0;HaplotypeScore=231.9506;InbreedingCoeff=0.8197;MQ=46.72;MQ0=7;MQRankSum=-10.731;QD=32.97;ReadPosRankSum=-1.419;VQSLOD=2.8708;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:24.61:0,25,2400	0/0:8,0:8:24.07:0,24,848	0/0:25,0:9:12.41:0,12,319	0/0:30,0:20:38.96:0,39,1038	0/0:23,0:23:29.69:0,30,1032	0/0:17,0:17:34.60:0,35,1139	0/0:24,0:24:62.99:0,63,1891	0/0:23,0:21:44.84:0,45,1345	0/0:36,0:36:24.80:0,25,2363	0/0:26,0:26:75.23:0,75,2534	0/0:21,0:21:63.22:0,63,2358	1/1:6,6:12:24.01:513,24,0	1/1:4,8:12:35.57:788,36,0	1/1:5,7:12:31.17:544,31,0	1/1:5,9:14:36.01:774,36,0	0/0:39,0:39:99:0,117,4582	0/1:23,0:23:0.22:0,0,1189	0/0:20,0:19:12.23:0,12,1791	0/0:22,0:21:56.96:0,57,1569	0/0:17,0:17:41.35:0,41,1430	0/0:56,0:53:99:0,104,3519	1/1:7,6:12:20.98:354,21,0	1/1:1,7:8:23.67:375,24,0	1/1:6,3:9:2.32:230,2,0	0/0:16,0:16:23.58:0,24,1328	0/0:35,0:34:56:0,56,2508	0/0:29,0:29:50.80:0,51,1729	0/1:6,0:6:15.22:15,0,124
chr10	110507096	.	CT	C	771.38	PASS	AB=0.915;AC=12;AF=0.214;AN=56;BaseQRankSum=11.889;DP=622;FS=4.256;HRun=1;HaplotypeScore=151.9807;InbreedingCoeff=-0.2883;MQ=47.64;MQ0=12;MQRankSum=-8.647;QD=3.59;ReadPosRankSum=0.490;VQSLOD=0.2966;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:34,6:40:32.97:33,0,1175	0/0:9,0:9:27.09:0,27,431	0/0:28,0:8:18.06:0,18,261	0/0:35,0:19:45.47:0,45,716	0/0:18,1:19:31.05:0,31,480	0/0:13,2:15:0.29:0,0,536	0/0:26,1:26:21.85:0,22,959	0/0:23,0:21:54.18:0,54,864	0/1:27,8:35:99:235,0,1050	0/0:27,0:27:81.28:0,81,1293	0/0:23,0:23:69.24:0,69,1101	0/1:10,0:10:32.41:34,0,32	0/1:12,0:12:21.59:60,0,22	0/1:11,0:11:30.28:30,0,67	0/1:13,0:13:29.43:57,0,29	0/0:42,0:42:99:0,126,2014	0/0:22,0:22:45.11:0,45,690	0/0:20,1:20:20:0,20,801	0/0:21,1:21:33.48:0,33,839	0/0:15,3:18:1.99:0,2,594	0/0:55,1:54:99:0,112,1750	0/1:9,0:8:11.10:11,0,64	0/1:7,0:7:1.73:2,0,71	0/1:7,0:7:7.35:7,0,22	0/0:16,3:19:2.89:0,3,584	0/1:26,6:31:61.58:62,0,1077	0/1:24,9:32:99:285,0,733	0/1:3,3:6:49.70:97,0,50
chr10	110507172	.	ACATCCATCCATC	A	4387.49	PASS	AC=22;AF=0.440;AN=50;BaseQRankSum=-4.827;DP=805;FS=1.209;HRun=0;HaplotypeScore=273.5301;InbreedingCoeff=0.8918;MQ=43.59;MQ0=91;MQRankSum=-6.586;QD=21.51;ReadPosRankSum=1.054;VQSLOD=3.3568;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:39.09:0,39,620	0/0:8,0:8:9.50:0,10,281	./.	./.	1/1:17,7:19:15.01:304,15,0	1/1:24,1:25:15.02:289,15,0	1/1:21,0:21:3.01:78,3,0	./.	0/0:28,0:28:26.92:0,27,469	0/0:21,0:19:18.53:0,19,604	0/0:14,0:13:12.04:0,12,445	1/1:21,0:21:24.07:695,24,0	1/1:14,0:14:21.06:559,21,0	1/1:12,0:12:21.07:666,21,0	1/1:23,0:23:36.11:963,36,0	0/0:39,0:38:75.24:0,75,2346	0/0:44,0:43:65.17:0,65,1014	0/0:31,0:30:45.12:0,45,750	0/0:39,0:22:30.10:0,30,506	0/0:19,0:18:11.71:0,12,179	0/0:75,0:67:75.91:0,76,1241	1/1:7,0:7:9.03:194,9,0	1/1:8,0:7:9.03:178,9,0	1/1:25,0:25:8.63:156,9,0	1/1:16,8:24:9.03:306,9,0	0/0:30,0:27:24.08:0,24,443	0/0:26,0:25:18.06:0,18,367	0/0:5,0:5:6.02:0,6,109
chr10	110507207	.	TCCATCCATCC	T	2361.09	PASS	AB=0.889;AC=11;AF=0.196;AN=56;BaseQRankSum=7.252;DP=629;FS=0.470;HRun=0;HaplotypeScore=239.0005;InbreedingCoeff=-0.2462;MQ=47.40;MQ0=30;MQRankSum=-3.552;QD=12.83;ReadPosRankSum=4.557;VQSLOD=2.3499;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:84.07:0,84,1734	0/0:12,0:11:30.10:0,30,752	0/0:42,0:14:42.14:0,42,609	0/0:37,0:11:33.11:0,33,477	0/1:14,0:13:94.67:95,0,123	0/1:16,0:16:58.96:59,0,341	0/1:11,0:11:29.74:30,0,150	0/0:27,0:23:63.21:0,63,916	0/0:17,0:17:48.15:0,48,1166	0/0:21,0:21:63.20:0,63,1585	0/0:9,0:9:27.09:0,27,865	0/1:17,5:22:99:477,0,145	0/1:12,4:16:99:384,0,115	0/1:13,5:18:99:425,0,219	0/1:14,9:23:99:608,0,117	0/0:41,0:40:99:0,117,3783	0/0:40,0:40:99:0,106,2230	0/0:32,0:31:85.75:0,86,1775	0/0:20,0:15:42.14:0,42,1005	0/0:14,0:14:29.14:0,29,659	0/0:54,0:50:99:0,127,2649	0/1:10,2:12:99:101,0,163	0/1:10,1:11:69.91:126,0,70	0/1:21,3:24:60.88:61,0,258	0/1:17,0:17:99:144,0,265	0/0:25,0:22:60.20:0,60,1247	0/0:16,0:16:45.15:0,45,933	0/0:4,0:4:12.04:0,12,299
chr10	110507369	.	G	GTTTTTTTTTTTT	21851.01	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=1.924;DP=497;FS=12.523;HRun=12;HaplotypeScore=180.7877;InbreedingCoeff=0.8367;MQ=58.48;MQ0=13;MQRankSum=-7.410;QD=52.28;ReadPosRankSum=-3.022;VQSLOD=0.7759;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:24:57.15:1925,57,0	0/0:5,0:6:11.83:0,12,324	0/0:15,0:13:5.47:0,5,240	0/1:11,0:11:9.86:10,0,34	1/1:19,0:19:48.16:1250,48,0	1/1:14,0:14:38.80:1065,39,0	1/1:10,0:8:13.29:241,13,0	1/1:31,0:30:47.60:1482,48,0	1/1:23,0:23:54.19:1756,54,0	0/0:24,0:25:41.05:0,41,959	0/0:15,0:14:35.86:0,36,1055	1/1:13,0:12:24.08:443,24,0	1/1:12,0:13:18.06:437,18,0	1/1:16,0:11:24.08:717,24,0	1/1:19,0:18:15.05:402,15,0	0/0:15,0:16:28.94:0,29,601	1/1:15,11:22:27.56:1432,28,0	1/1:12,0:11:21.07:887,21,0	1/1:26,0:26:51.65:1972,52,0	1/1:16,0:14:18.06:513,18,0	1/1:17,0:15:18.53:514,19,0	1/1:13,0:13:27.09:690,27,0	1/1:21,0:17:36.12:714,36,0	1/1:11,0:9:9.03:388,9,0	1/1:12,0:11:27.09:872,27,0	1/1:29,0:27:48.12:1613,48,0	1/1:24,0:22:48.63:1930,49,0	1/1:14,0:13:21.07:600,21,0
chr10	110507764	.	C	CTG	3401.86	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.385;DP=595;FS=21.515;HRun=0;HaplotypeScore=71.4082;InbreedingCoeff=0.9904;MQ=74.25;MQ0=0;MQRankSum=-0.638;QD=45.36;ReadPosRankSum=-0.375;VQSLOD=2.6061;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.24:0,72,1007	0/0:7,0:7:18.06:0,18,252	0/0:19,0:19:45.15:0,45,613	0/0:20,0:18:18.85:0,19,352	1/1:1,11:12:27.09:486,27,0	1/1:1,17:18:45.15:810,45,0	1/1:3,28:31:81.28:1459,81,0	0/0:27,0:27:75.22:0,75,1028	0/0:19,0:19:57.19:0,57,797	0/0:27,0:27:72.24:0,72,1004	0/0:7,0:7:15.05:0,15,210	0/0:24,0:24:66.22:0,66,923	0/0:25,0:25:72.22:0,72,987	0/0:28,0:28:72.22:0,72,989	0/0:23,0:23:63.20:0,63,865	0/0:27,0:27:72.24:0,72,1006	0/0:30,0:30:81.27:0,81,1133	0/0:32,0:32:96.32:0,96,1342	0/0:26,0:26:72.16:0,72,968	0/0:14,0:14:30.10:0,30,420	0/0:38,0:38:99:0,111,1534	0/0:9,0:9:27.09:0,27,378	0/0:11,0:11:27.09:0,27,378	0/0:28,0:28:81.27:0,81,1127	1/1:0,14:14:36.12:648,36,0	0/0:24,0:24:66.22:0,66,924	0/0:17,0:17:48.16:0,48,672	0/0:11,0:11:33.09:0,33,442
chr10	110508521	.	C	CTT	2284.04	PASS	AB=0.701;AC=33;AF=0.589;AN=56;BaseQRankSum=2.442;DP=538;FS=8.743;HRun=15;HaplotypeScore=102.0587;InbreedingCoeff=0.1679;MQ=64.14;MQ0=7;MQRankSum=0.533;QD=5.21;ReadPosRankSum=-0.826;VQSLOD=-0.1123;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:11,3:31:7.54:159,0,8	0/0:9,0:12:19.97:0,20,170	0/0:25,0:12:12.35:0,12,125	0/0:19,0:10:5.46:0,5,22	1/1:12,0:31:15.12:107,15,0	1/1:2,1:12:17.36:89,17,0	1/1:7,1:21:5.09:94,5,0	0/1:15,2:34:0.78:175,0,1	0/1:6,0:11:6.38:6,0,35	0/0:11,0:11:26.87:0,27,212	0/0:15,0:16:11.43:0,11,90	1/1:13,1:14:11.50:221,11,0	1/1:9,11:21:14.36:140,14,0	1/1:7,7:15:8.94:91,9,0	1/1:10,3:16:20.52:212,21,0	0/0:13,0:13:20.72:0,21,166	1/1:9,3:22:10.30:167,10,0	0/1:5,1:15:5.21:49,0,5	0/1:13,1:21:18.79:65,0,19	1/1:7,10:20:22.41:260,22,0	1/1:4,0:5:2.99:23,3,0	0/1:12,1:12:20.05:64,0,20	1/1:7,12:20:17.24:197,17,0	0/1:8,10:18:30.78:75,0,31	0/1:11,1:21:44.41:80,0,44	0/1:15,0:29:47.71:79,0,48	0/1:13,0:27:27.54:28,0,39	0/1:10,1:13:45.93:86,0,46
chr10	110508637	.	TTC	T	2893.03	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=5.199;DP=463;FS=5.047;HRun=0;HaplotypeScore=80.0352;InbreedingCoeff=0.5454;MQ=52.98;MQ0=30;MQRankSum=-0.274;QD=7.86;ReadPosRankSum=-3.711;VQSLOD=2.2929;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:23:36.10:236,36,0	0/0:14,0:14:42.06:0,42,606	0/0:12,0:4:1.56:0,2,87	0/0:18,0:14:6.59:0,7,245	1/1:21,0:21:18.15:203,18,0	1/1:15,1:16:19.76:125,20,0	1/1:21,0:20:49.52:279,50,0	1/1:27,2:27:52.74:419,53,0	1/1:13,0:12:7.25:26,7,0	0/0:20,0:18:53.18:0,53,770	0/0:18,0:16:34.38:0,34,471	0/1:11,0:11:3.09:39,0,3	0/1:15,0:13:26.99:69,0,27	1/1:8,0:7:9.95:48,10,0	0/1:13,0:11:22.67:72,0,23	0/0:9,0:8:22.88:0,23,331	1/1:26,1:24:35.14:280,35,0	1/1:18,0:14:26.09:128,26,0	1/1:17,1:17:22.24:190,22,0	1/1:18,0:17:35.73:213,36,0	1/1:14,0:12:15.76:132,16,0	0/1:3,0:3:1.42:1,0,14	0/1:19,0:14:37.85:40,0,38	0/0:4,0:2:5.72:0,6,33	1/1:23,0:20:22.89:108,23,0	1/1:21,0:21:3.83:197,4,0	1/1:24,0:23:17.51:144,18,0	1/1:12,0:12:15.51:133,16,0
chr10	110508638	.	TC	T	7505.04	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=3.448;DP=461;FS=3.006;HRun=1;HaplotypeScore=58.3426;InbreedingCoeff=0.8637;MQ=51.52;MQ0=32;MQRankSum=-2.000;QD=20.34;ReadPosRankSum=-3.231;VQSLOD=4.0954;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,13:23:56.41:609,56,0	0/0:15,0:15:41.98:0,42,484	0/0:11,0:3:3.50:0,4,73	0/0:18,0:14:19.05:0,19,207	1/1:12,9:21:45:497,45,0	1/1:3,13:16:20.99:249,21,0	1/1:15,7:20:56.63:593,57,0	1/1:13,16:27:73.57:807,74,0	1/1:1,12:12:14.93:142,15,0	0/0:20,0:18:53.16:0,53,619	0/0:19,0:17:34.27:0,34,360	1/1:10,0:10:10.47:71,10,0	1/1:14,0:12:17.41:121,17,0	1/1:8,0:7:11.14:69,11,0	1/1:13,0:11:13.86:116,14,0	0/0:9,0:8:23.22:0,23,256	1/1:15,11:23:51.28:635,51,0	1/1:12,7:14:32.81:394,33,0	1/1:11,7:17:39.58:377,40,0	1/1:8,10:17:45.01:512,45,0	1/1:6,7:11:29.66:341,30,0	1/1:3,0:3:5.30:25,5,0	1/1:19,0:14:9.94:94,10,0	1/1:4,0:2:0.41:8,0,0	1/1:4,18:19:27:330,27,0	1/1:2,19:21:21.94:631,22,0	1/1:3,21:23:36.78:548,37,0	1/1:6,6:12:30.83:337,31,0
chr10	110509499	.	GTATTTATTTATTTATTTATT	G	582.48	PASS	AB=1.000;AC=9;AF=0.205;AN=44;BaseQRankSum=3.070;DP=288;FS=5.539;HRun=0;HaplotypeScore=139.2179;InbreedingCoeff=0.4697;MQ=62.08;MQ0=3;MQRankSum=-2.065;QD=9.10;ReadPosRankSum=-0.160;VQSLOD=2.3603;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:15.05:0,15,1001	0/0:4,0:4:3.01:0,3,150	./.	./.	./.	0/0:8,0:8:9.01:0,9,408	0/0:5,0:5:6.02:0,6,375	0/0:30,0:26:21.04:0,21,450	0/0:10,0:10:6.02:0,6,283	0/0:6,0:9:12.04:0,12,957	0/0:5,0:6:6.02:0,6,445	1/1:9,0:9:6.01:113,6,0	1/1:8,3:11:6.02:269,6,0	1/1:5,3:8:6.02:182,6,0	1/1:8,1:9:3.01:117,3,0	0/0:4,0:6:3.01:0,3,262	0/0:27,0:26:48.16:0,48,3538	0/1:27,0:24:25.48:25,0,1035	0/0:8,0:7:1.82:0,2,5	0/0:4,0:4:3.01:0,3,123	0/0:8,0:8:18.06:0,18,1304	./.	./.	./.	0/0:11,0:9:12.04:0,12,1042	0/0:9,0:9:12.02:0,12,603	0/0:14,0:14:9.03:0,9,462	0/0:10,0:10:24.08:0,24,1583
chr10	110509556	.	T	TA	93.84	PASS	AB=0.911;AC=7;AF=0.135;AN=52;BaseQRankSum=2.346;DP=269;FS=14.294;HRun=0;HaplotypeScore=47.9641;InbreedingCoeff=-0.0805;MQ=38.80;MQ0=38;MQRankSum=2.676;QD=1.47;ReadPosRankSum=-1.120;VQSLOD=0.0984;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:10:20.64:0,21,136	0/0:5,0:5:15.05:0,15,209	./.	./.	0/0:11,0:10:14.71:0,15,96	0/0:7,0:7:4.74:0,5,16	0/0:4,0:4:11.72:0,12,73	0/0:30,0:28:82.73:0,83,532	0/0:6,0:5:8.93:0,9,64	0/0:8,0:8:7.90:0,8,177	0/1:13,0:12:10.93:11,0,283	0/0:10,0:10:30.10:0,30,418	0/0:7,0:6:12.01:0,12,144	0/0:11,0:10:20.73:0,21,292	0/0:13,0:9:18.03:0,18,230	0/1:3,0:3:0:0,0,0	0/0:23,0:18:40.70:0,41,235	0/0:29,0:24:12.46:0,12,54	0/0:7,0:4:8.62:0,9,45	0/0:5,0:5:11.85:0,12,80	0/1:10,0:5:13.76:14,0,48	0/0:5,0:5:3.01:0,3,42	0/0:6,0:6:12.04:0,12,167	0/0:3,0:3:9.03:0,9,125	0/1:7,5:10:17.31:67,0,17	0/1:5,1:4:13.35:13,0,36	0/1:8,1:5:10.13:10,0,52	0/1:10,1:8:48.06:93,0,48
chr10	110509557	.	T	TTTA	273.83	PASS	AB=0.925;AC=8;AF=0.154;AN=52;BaseQRankSum=1.727;DP=280;FS=0.891;HRun=0;HaplotypeScore=59.2821;InbreedingCoeff=-0.1287;MQ=39.05;MQ0=39;MQRankSum=1.479;QD=4.03;ReadPosRankSum=-3.669;VQSLOD=0.7591;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:10:21:0,21,182	0/0:5,0:5:15.05:0,15,254	./.	./.	0/1:11,0:10:3.03:3,0,82	0/0:7,0:7:5.81:0,6,33	0/1:4,0:4:6.98:7,0,66	0/0:30,0:28:23.84:0,24,533	0/0:6,0:5:9:0,9,77	0/0:11,0:11:20.64:0,21,237	0/0:13,0:12:18.58:0,19,355	0/0:10,0:10:30.10:0,30,493	0/0:8,0:7:12.04:0,12,198	0/0:11,0:10:20.69:0,21,354	0/0:13,0:9:18.02:0,18,259	0/0:4,0:4:1.71:0,2,4	0/0:24,0:19:38.38:0,38,322	0/0:31,0:26:14.64:0,15,88	0/1:9,0:6:15.79:20,0,16	0/1:5,0:5:8.99:9,0,42	0/0:10,0:5:11.94:0,12,117	0/0:5,0:5:5.98:0,6,57	0/0:6,0:6:12.04:0,12,203	0/0:3,0:3:9.03:0,9,149	0/1:7,5:10:8.82:173,0,9	0/1:6,1:4:31.28:64,0,31	0/1:8,1:5:38.09:38,0,43	0/1:10,1:8:41.68:82,0,42
chr10	110510378	.	C	CACACACACAT	40297.76	PASS	AB=0.677;AC=41;AF=0.732;AN=56;BaseQRankSum=1.042;DP=1012;FS=4.321;HRun=0;HaplotypeScore=260.5261;InbreedingCoeff=0.5094;MQ=48.25;MQ0=5;MQRankSum=-12.323;QD=46.64;ReadPosRankSum=0.927;VQSLOD=4.1736;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,27:45:41.70:939,0,42	0/0:17,0:17:36.06:0,36,842	0/0:39,0:10:12:0,12,128	0/0:29,0:11:17.41:0,17,178	1/1:9,10:24:20.55:1021,21,0	0/1:15,6:21:29.23:1202,0,29	1/1:12,19:38:51.17:2564,51,0	1/1:17,20:44:99:3379,102,0	1/1:27,15:45:78.18:2902,78,0	0/0:45,0:45:99:0,120,3074	0/0:17,0:17:51.13:0,51,1312	1/1:13,0:53:80.82:2431,81,0	1/1:11,0:51:67.51:2701,68,0	1/1:9,0:46:72.12:2263,72,0	1/1:14,0:58:74.52:2791,75,0	0/1:48,1:48:11.47:11,0,3609	0/1:2,14:16:29.31:607,0,29	0/1:3,12:22:25.39:547,0,25	1/1:4,8:20:51.23:1275,51,0	1/1:7,27:44:72.20:3554,72,0	1/1:15,44:71:12.38:509,12,0	1/1:1,0:27:45.11:1373,45,0	1/1:2,0:29:47.77:1455,48,0	1/1:10,0:41:2.86:773,3,0	1/1:8,18:30:39.56:2025,40,0	1/1:13,22:48:12.57:3150,13,0	1/1:7,17:26:47.53:2182,48,0	1/1:5,6:13:15.05:645,15,0
chr10	110510562	.	GCACA	G	13892.56	PASS	AB=0.636;AC=36;AF=0.643;AN=56;BaseQRankSum=-1.648;DP=979;FS=2.676;HRun=0;HaplotypeScore=226.9092;InbreedingCoeff=0.2585;MQ=51.43;MQ0=22;MQRankSum=-2.541;QD=17.47;ReadPosRankSum=5.806;VQSLOD=4.5401;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,20:37:37.38:987,37,0	0/0:11,0:13:23.52:0,24,415	0/0:61,0:10:15.52:0,16,340	0/1:43,0:8:5.86:6,0,51	1/1:4,0:16:24.49:224,24,0	1/1:3,0:12:21.02:196,21,0	1/1:12,0:27:30.03:280,30,0	1/1:9,8:17:21.03:277,21,0	1/1:14,35:48:83.93:1386,84,0	0/0:38,0:37:72.45:0,72,1670	0/0:18,0:19:38.87:0,39,862	0/1:17,11:58:99:428,0,260	0/1:20,14:52:99:695,0,115	0/1:8,20:52:99:859,0,113	0/1:28,20:74:99:1008,0,163	0/0:50,0:52:99:0,126,2911	0/1:11,12:23:0.64:529,0,1	0/1:4,10:14:35.90:323,0,36	1/1:7,3:7:9.03:144,9,0	1/1:8,12:20:36.12:594,36,0	1/1:36,25:59:36.65:1255,37,0	0/1:11,21:42:51.30:807,0,51	0/1:10,14:31:36.83:446,0,37	0/1:18,16:51:67.14:681,0,67	1/1:5,0:24:54.06:503,54,0	1/1:12,25:40:78.24:1223,78,0	1/1:7,11:18:23.51:510,24,0	1/1:3,13:17:24.23:535,24,0
chr10	110510670	.	GACAC	G	3904.93	PASS	AB=0.794;AC=24;AF=0.462;AN=52;BaseQRankSum=2.263;DP=756;FS=2.259;HRun=0;HaplotypeScore=139.8432;InbreedingCoeff=0.4718;MQ=58.47;MQ0=22;MQRankSum=-2.779;QD=11.06;ReadPosRankSum=2.547;VQSLOD=3.0544;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,11:34:26.63:516,27,0	0/0:9,0:10:8.74:0,9,78	./.	./.	0/1:17,1:21:57.68:58,0,182	0/1:11,0:12:29.18:29,0,162	0/1:16,3:27:60.35:69,0,60	1/1:26,4:29:2.07:193,2,0	1/1:23,14:37:29.12:430,29,0	0/0:29,0:29:39.05:0,39,734	0/0:11,0:11:15.05:0,15,356	0/0:23,0:25:33.11:0,33,649	0/0:17,0:24:36.11:0,36,663	0/0:24,0:26:33.08:0,33,662	0/0:33,0:40:45.15:0,45,905	0/0:41,1:41:12.95:0,13,1264	1/1:14,4:20:18.05:263,18,0	1/1:14,7:22:36.07:496,36,0	1/1:5,2:8:9.02:122,9,0	1/1:16,3:22:17.97:192,18,0	1/1:31,11:42:39.11:588,39,0	0/0:18,0:24:18.06:0,18,324	0/0:10,0:17:15.11:0,15,300	0/0:33,0:48:36.88:0,37,1156	0/1:13,1:17:60.33:97,0,60	0/1:22,4:27:48.75:225,0,49	0/1:13,11:26:17.25:457,0,17	1/1:2,3:6:12.03:170,12,0
chr10	110510957	.	G	GT	10852.77	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-16.357;DP=654;FS=9.735;HRun=6;HaplotypeScore=55.8295;InbreedingCoeff=0.9983;MQ=80.29;MQ0=0;MQRankSum=-0.962;QD=30.31;ReadPosRankSum=1.521;VQSLOD=5.1754;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:75.20:926,75,0	0/0:11,0:11:30.07:0,30,306	0/0:24,0:24:31.73:0,32,388	0/0:11,0:11:23.56:0,24,243	1/1:3,26:29:69.22:868,69,0	1/1:2,22:24:54.17:679,54,0	1/1:2,14:16:39.12:491,39,0	1/1:7,32:39:87.27:1080,87,0	1/1:2,18:20:54.17:679,54,0	0/0:27,0:27:72.15:0,72,729	0/0:18,0:18:51.12:0,51,520	0/0:30,0:30:87.20:0,87,886	0/0:20,0:20:57.13:0,57,582	0/0:27,0:27:56.40:0,56,771	0/0:29,0:29:84.17:0,84,850	0/0:33,0:33:87.19:0,87,888	1/1:0,22:22:57.18:717,57,0	1/1:1,12:13:30.10:377,30,0	1/1:2,11:13:33.11:415,33,0	1/1:5,32:37:93.29:1160,93,0	1/1:3,22:25:45.14:566,45,0	0/0:26,0:26:63.12:0,63,635	0/0:20,0:20:60.14:0,60,612	0/0:20,0:20:48.10:0,48,489	1/1:0,26:26:66.21:830,66,0	1/1:2,25:27:44.62:874,45,0	1/1:1,28:29:78.22:964,78,0	1/1:0,6:6:18.06:226,18,0
chr10	110511665	.	G	GATTTGTA	15647.27	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-2.981;DP=675;FS=4.122;HRun=0;HaplotypeScore=166.1971;InbreedingCoeff=0.9983;MQ=80.61;MQ0=0;MQRankSum=-17.564;QD=92.04;ReadPosRankSum=-1.338;VQSLOD=5.2436;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,2496	0/0:14,0:14:36.12:0,36,921	0/0:24,0:24:66.20:0,66,1469	0/0:16,0:16:48.16:0,48,1105	0/0:27,0:27:75.23:0,75,1777	0/0:22,0:22:60.21:0,60,1539	0/0:12,0:12:36.12:0,36,924	0/0:24,0:24:63.22:0,63,1616	0/0:30,0:30:90.29:0,90,2250	0/0:20,0:20:57.20:0,57,1413	0/0:24,0:24:69.24:0,69,1710	1/1:11,17:29:72.25:2686,72,0	1/1:7,15:26:66.23:2364,66,0	1/1:2,17:19:57.20:2197,57,0	1/1:7,16:23:54.19:2018,54,0	0/0:30,0:30:87.26:0,87,2045	0/0:31,0:31:90.31:0,90,2267	0/0:12,0:12:36.12:0,36,922	0/0:19,0:19:54.17:0,54,1229	0/0:30,0:30:84.27:0,84,2024	0/0:24,0:24:72.25:0,72,1847	1/1:2,20:24:69.24:2568,69,0	1/1:7,20:27:75.26:2805,75,0	1/1:4,13:22:27.01:1009,27,0	0/0:27,0:27:78.26:0,78,1940	0/0:35,0:35:99:0,102,2422	0/0:41,0:41:99:0,117,2865	0/0:6,0:6:18.06:0,18,462
chr10	110512650	.	TAA	T	7639.58	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-5.359;DP=592;FS=0.755;HRun=13;HaplotypeScore=82.5671;InbreedingCoeff=0.9147;MQ=69.55;MQ0=3;MQRankSum=-1.448;QD=19.59;ReadPosRankSum=0.447;VQSLOD=4.3330;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,37:45:90.03:922,90,0	0/0:5,0:6:14.52:0,15,164	0/1:23,0:15:2.35:2,0,185	0/0:13,0:13:23.43:0,23,283	1/1:4,24:29:63.04:611,63,0	1/1:3,18:22:38.97:428,39,0	1/1:4,14:18:42.04:407,42,0	1/1:6,25:30:69.04:662,69,0	1/1:3,18:21:51.01:495,51,0	0/0:24,0:27:73.78:0,74,918	0/0:14,0:16:40.01:0,40,472	0/0:4,1:18:9.83:0,10,137	0/0:8,0:16:23.49:0,23,147	0/0:1,0:11:19.96:0,20,69	0/0:5,0:21:43.44:0,43,197	0/0:15,0:17:44.63:0,45,593	1/1:2,18:22:32.93:419,33,0	1/1:6,11:17:29.73:274,30,0	1/1:5,17:23:50.75:472,51,0	1/1:3,17:21:47.47:422,47,0	1/1:2,15:17:42.06:407,42,0	0/0:2,1:14:4.08:0,4,89	0/0:4,1:21:8.84:0,9,91	0/0:5,1:21:30.44:0,30,118	1/1:3,17:21:41.78:390,42,0	1/1:7,19:26:50.96:495,51,0	1/1:6,18:24:54.04:524,54,0	1/1:0,26:28:74.60:710,75,0
chr10	110513921	.	T	TAA	3602.35	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-4.314;DP=659;FS=5.772;HRun=11;HaplotypeScore=105.1018;InbreedingCoeff=0.9275;MQ=70.60;MQ0=2;MQRankSum=3.827;QD=21.70;ReadPosRankSum=-0.428;VQSLOD=2.9409;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:37.52:0,38,582	0/0:5,0:6:14.34:0,14,109	0/0:16,0:14:7.59:0,8,87	0/0:16,0:11:1.42:0,1,12	0/0:25,0:29:59.54:0,60,589	0/0:14,0:14:36.04:0,36,349	0/0:20,0:21:53.78:0,54,493	0/0:23,0:26:41.89:0,42,500	0/0:22,0:25:38.95:0,39,428	0/0:37,0:37:77.96:0,78,750	0/0:24,0:24:60.03:0,60,576	1/1:2,13:19:34.58:417,35,0	1/1:4,20:26:44.14:611,44,0	1/1:4,25:31:50.66:704,51,0	1/1:9,13:26:29.90:443,30,0	0/0:26,0:27:66:0,66,690	0/0:37,0:38:99:0,105,999	0/0:20,1:22:7.06:0,7,387	0/0:21,0:22:32.94:0,33,369	0/0:25,0:25:62.71:0,63,593	0/0:13,0:13:39.04:0,39,370	1/1:4,6:13:23.47:258,23,0	1/1:1,23:26:54.87:723,55,0	1/1:5,19:23:32.94:448,33,0	0/0:24,0:25:59.75:0,60,565	0/0:28,0:29:72.05:0,72,742	0/0:31,0:31:83.84:0,84,790	0/0:9,0:9:15:0,15,145
chr10	110514380	.	G	GTTTC	11565.32	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-4.140;DP=564;FS=9.877;HRun=0;HaplotypeScore=97.9703;InbreedingCoeff=0.9287;MQ=71.74;MQ0=1;MQRankSum=-4.467;QD=31.69;ReadPosRankSum=-0.571;VQSLOD=4.0746;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,17:24:36.19:831,36,0	0/0:13,0:13:30.07:0,30,433	0/0:17,0:15:2.95:0,3,94	0/0:15,0:12:9.03:0,9,117	0/0:22,0:22:54.14:0,54,821	0/0:25,0:25:66.17:0,66,1018	0/0:15,0:15:33.06:0,33,461	1/1:16,21:37:63.61:754,64,0	1/1:7,13:21:30.10:680,30,0	0/0:24,0:24:54.15:0,54,812	0/0:22,0:22:57.16:0,57,872	1/1:11,0:11:15.04:283,15,0	1/1:14,0:15:20.97:396,21,0	1/1:13,0:13:18.06:333,18,0	1/1:12,0:12:15.03:285,15,0	0/0:25,0:25:54.15:0,54,834	1/1:14,17:31:72.22:1545,72,0	1/1:3,8:12:15.05:310,15,0	1/1:18,15:35:68.92:1025,69,0	1/1:7,20:27:62.95:1140,63,0	1/1:7,7:14:11.90:178,12,0	1/1:7,0:7:8.95:128,9,0	1/1:14,0:14:15.03:275,15,0	1/1:10,0:10:9.02:150,9,0	0/0:21,0:21:53.97:0,54,743	1/1:8,17:28:14.16:1162,14,0	1/1:9,21:30:51.17:1192,51,0	1/1:6,16:22:39.13:898,39,0
chr10	110514384	.	C	CTTTT	6897.23	PASS	AB=0.987;AC=24;AF=0.429;AN=56;BaseQRankSum=9.944;DP=575;FS=0.000;HRun=3;HaplotypeScore=110.6590;InbreedingCoeff=0.0050;MQ=67.97;MQ0=1;MQRankSum=-6.304;QD=17.46;ReadPosRankSum=5.970;VQSLOD=1.3430;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:23:30.29:546,30,0	0/0:15,0:15:42.07:0,42,614	0/1:16,0:13:0.08:0,0,250	0/0:13,0:10:8.95:0,9,162	0/0:22,0:22:60.17:0,60,981	0/0:24,0:24:68.90:0,69,1167	0/0:15,0:14:33.11:0,33,556	0/1:39,0:39:99:247,0,158	1/1:18,0:18:8.08:441,8,0	0/0:24,0:24:61.68:0,62,986	0/0:23,0:23:66.14:0,66,1068	0/1:12,2:14:28.84:228,0,29	0/1:17,0:17:15.86:287,0,16	1/1:13,0:13:18.06:243,18,0	0/1:14,0:14:49.80:177,0,50	0/0:23,0:23:60.13:0,60,997	0/1:32,1:33:27.96:968,0,28	1/1:12,0:12:17.99:228,18,0	0/1:30,1:31:99:504,0,102	0/1:28,0:28:6.91:651,0,7	0/1:15,0:15:73.11:73,0,84	1/1:8,0:8:5.98:75,6,0	0/1:15,0:15:55.99:168,0,56	0/1:14,0:14:12.96:90,0,13	0/0:20,0:20:54.01:0,54,901	0/1:30,0:30:53.66:633,0,54	0/1:31,0:31:7.62:799,0,8	0/1:22,0:22:66.92:540,0,67
chr10	110514388	.	C	CTTTCTT	8989.03	PASS	AB=0.992;AC=28;AF=0.500;AN=56;BaseQRankSum=2.252;DP=577;FS=7.325;HRun=0;HaplotypeScore=119.7541;InbreedingCoeff=0.4177;MQ=61.06;MQ0=1;MQRankSum=-3.276;QD=23.11;ReadPosRankSum=3.079;VQSLOD=4.1239;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:9.22:445,9,0	0/0:14,0:14:36.07:0,36,609	0/0:12,0:9:2.90:0,3,110	0/0:9,0:6:11.79:0,12,138	0/0:22,0:23:59.91:0,60,1114	0/0:25,0:25:66.03:0,66,1316	0/0:13,0:13:36.01:0,36,585	0/1:36,0:36:99:403,0,130	1/1:19,0:19:7.18:405,7,0	0/0:19,0:21:60.12:0,60,1106	0/0:24,0:24:62.91:0,63,1152	1/1:2,10:20:15.04:487,15,0	1/1:2,13:18:20.95:680,21,0	1/1:1,10:16:18.06:564,18,0	1/1:3,10:15:15.03:488,15,0	0/0:22,0:22:60.16:0,60,1155	0/1:32,0:32:25.85:924,0,26	0/1:11,0:11:10.22:145,0,10	0/1:28,0:29:4.27:669,0,4	0/1:29,0:29:1.60:698,0,2	0/1:14,0:14:12.08:99,0,12	1/1:1,5:6:8.95:209,9,0	1/1:3,12:21:20.98:523,21,0	1/1:3,9:15:10.84:278,11,0	0/0:21,0:21:56.92:0,57,1013	0/1:31,0:31:70.83:755,0,71	0/1:32,0:33:77.26:673,0,77	1/1:21,0:21:15.74:543,16,0
chr10	110514389	.	T	TTTC	7091.85	PASS	AB=0.955;AC=27;AF=0.482;AN=56;BaseQRankSum=4.961;DP=569;FS=4.355;HRun=0;HaplotypeScore=94.2591;InbreedingCoeff=0.2519;MQ=57.33;MQ0=1;MQRankSum=-3.797;QD=18.66;ReadPosRankSum=4.326;VQSLOD=4.5718;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:20:7.25:429,7,0	0/0:13,0:13:36.08:0,36,493	0/0:13,0:6:2.96:0,3,78	0/0:9,0:5:12.03:0,12,132	0/0:23,0:23:66.02:0,66,893	0/0:27,0:27:72.16:0,72,1045	0/0:15,0:14:38.99:0,39,482	0/1:32,1:33:99:396,0,214	1/1:18,1:19:3.95:433,4,0	0/0:21,0:21:60.16:0,60,841	0/0:23,0:23:63.17:0,63,907	1/1:20,0:20:15.04:212,15,0	1/1:18,0:18:21.06:296,21,0	1/1:16,0:16:2.41:228,2,0	1/1:14,0:14:15.03:213,15,0	0/0:23,0:23:60.17:0,60,898	0/1:30,2:31:31.54:943,0,32	0/1:11,1:12:12.78:170,0,13	0/1:25,2:27:11.99:673,0,12	0/1:26,3:29:24.02:749,0,24	0/1:14,0:14:14.04:111,0,14	1/1:6,0:6:8.94:100,9,0	1/1:19,0:19:10.93:195,11,0	1/1:15,0:15:8.24:108,8,0	0/0:22,0:22:56.97:0,57,786	0/1:31,1:32:62.66:696,0,63	0/1:32,0:32:99:619,0,99	0/1:19,1:20:25.51:522,0,26
chr10	110514555	.	CT	C	7957.14	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=3.822;DP=505;FS=7.784;HRun=10;HaplotypeScore=56.8207;InbreedingCoeff=0.9168;MQ=53.54;MQ0=12;MQRankSum=1.297;QD=18.46;ReadPosRankSum=3.158;VQSLOD=5.4935;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,40:43:95.96:833,96,0	0/0:9,0:9:21.06:0,21,232	0/0:12,0:2:3.01:0,3,33	0/0:4,0:2:0:0,0,0	1/1:1,17:18:38.99:339,39,0	1/1:7,19:25:50.96:443,51,0	1/1:3,11:14:23.99:208,24,0	1/1:5,21:22:56.93:485,57,0	1/1:2,17:19:38.96:338,39,0	0/0:20,0:19:36.08:0,36,387	0/0:14,0:14:39.09:0,39,424	1/1:2,9:11:17.99:156,18,0	1/1:5,12:16:32.98:286,33,0	1/1:1,14:15:29.98:260,30,0	1/1:3,18:21:35.97:313,36,0	0/0:15,0:15:39.09:0,39,423	1/1:3,33:35:95.01:813,95,0	1/1:2,15:18:31.45:374,31,0	1/1:3,11:13:29.95:254,30,0	1/1:3,18:21:44.98:391,45,0	1/1:4,15:19:41.98:365,42,0	1/1:0,7:7:21:182,21,0	1/1:0,8:8:20.67:182,21,0	1/1:3,17:19:38.98:339,39,0	1/1:6,12:17:23.97:208,24,0	1/1:5,21:24:32.84:511,33,0	1/1:3,18:20:47.99:417,48,0	1/1:1,10:10:29.99:260,30,0
chr10	110516771	.	ATAAGTAAGTAAGTAAG	A	5257.15	PASS	AB=0.950;AC=40;AF=0.714;AN=56;BaseQRankSum=5.365;DP=327;FS=7.662;HRun=0;HaplotypeScore=140.3830;InbreedingCoeff=0.5449;MQ=73.83;MQ0=0;MQRankSum=0.523;QD=21.55;ReadPosRankSum=-1.412;VQSLOD=3.1529;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,8:12:9.03:203,9,0	0/0:8,0:8:15.05:0,15,903	0/0:24,0:21:9.03:0,9,465	0/0:13,0:10:21.06:0,21,506	1/1:5,6:11:8.89:72,9,0	1/1:7,0:7:12.03:199,12,0	1/1:9,0:9:6.02:83,6,0	1/1:13,21:34:55.47:810,55,0	1/1:3,1:4:3.01:134,3,0	0/0:12,0:12:33.11:0,33,1644	0/0:7,0:7:18.04:0,18,835	1/1:8,0:8:9.02:150,9,0	1/1:3,0:3:6.01:132,6,0	0/1:11,0:11:3.36:236,0,3	0/1:12,0:12:3.37:194,0,3	0/0:19,0:19:39.13:0,39,2260	1/1:5,9:14:6.02:214,6,0	1/1:2,10:12:6.02:267,6,0	1/1:2,11:13:33.01:834,33,0	1/1:4,14:18:20.87:346,21,0	1/1:1,0:1:3.01:40,3,0	1/1:9,0:9:11.99:100,12,0	0/1:6,2:8:0:0,0,0	1/1:4,0:4:5.98:47,6,0	0/1:11,0:11:29.70:56,0,30	1/1:5,11:16:36.06:740,36,0	1/1:12,6:18:3.01:134,3,0	1/1:4,5:9:6.02:267,6,0
chr10	110516790	.	AGT	A	114.32	PASS	AB=0.908;AC=17;AF=0.304;AN=56;BaseQRankSum=6.229;DP=227;FS=0.000;HRun=0;HaplotypeScore=61.7126;InbreedingCoeff=0.1164;MQ=56.79;MQ0=2;MQRankSum=-4.424;QD=1.18;ReadPosRankSum=3.141;VQSLOD=1.2393;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:8.52:0,9,43	0/0:5,0:5:15.05:0,15,303	0/0:11,0:8:20.99:0,21,325	0/0:10,0:7:21.07:0,21,365	0/0:8,0:8:11.95:0,12,115	0/1:6,0:6:7.26:7,0,125	0/0:4,0:4:8.96:0,9,91	0/0:26,0:24:66.41:0,66,662	1/1:1,0:1:2.80:13,3,0	0/0:12,0:12:36.12:0,36,679	0/0:9,0:9:27.09:0,27,447	0/0:3,0:3:8.82:0,9,66	1/1:2,0:2:4.55:29,5,0	0/1:6,3:9:27.77:28,0,81	0/1:5,3:8:51.39:51,0,60	0/0:13,0:13:39.13:0,39,770	0/1:11,0:11:4.81:5,0,41	1/1:10,0:10:5.60:26,6,0	0/1:12,0:12:23.12:23,0,199	0/0:14,0:14:7.79:0,8,152	0/0:3,0:3:9.02:0,9,116	0/1:5,0:5:10.04:10,0,68	0/0:2,0:2:0:0,0,1	0/0:2,0:2:5.95:0,6,43	0/1:5,4:9:36.69:37,0,115	0/1:12,0:12:6.40:6,0,211	0/1:7,0:7:7.24:7,0,38	1/1:5,0:5:5.60:26,6,0
chr10	110516793	.	AAGTAAG	A	759.98	PASS	AB=0.903;AC=18;AF=0.321;AN=56;BaseQRankSum=9.234;DP=225;FS=1.513;HRun=0;HaplotypeScore=72.6542;InbreedingCoeff=0.0091;MQ=53.85;MQ0=3;MQRankSum=-7.109;QD=6.50;ReadPosRankSum=6.336;VQSLOD=1.0729;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:2.66:6,3,0	0/0:5,0:5:15.05:0,15,507	0/0:9,0:7:17.65:0,18,380	0/0:9,0:6:18.05:0,18,410	0/1:8,0:8:35.54:36,0,42	0/0:5,0:5:3.77:0,4,66	0/0:4,0:4:6.88:0,7,57	0/0:27,0:25:25.07:0,25,537	1/1:1,0:1:3.01:38,3,0	0/0:14,0:14:42.14:0,42,1134	0/0:10,0:10:30.09:0,30,657	0/0:3,0:3:3.15:0,3,30	1/1:1,0:1:3.01:31,3,0	0/1:4,3:7:7.58:130,0,8	0/1:3,3:6:5.43:127,0,5	0/0:13,0:13:39.13:0,39,1174	0/1:12,0:12:37.42:37,0,76	1/1:10,0:10:6.02:76,6,0	0/1:14,0:14:99:145,0,246	0/1:14,0:14:21.16:21,0,70	0/0:3,0:3:9.02:0,9,116	0/0:3,0:3:8.96:0,9,84	0/0:2,0:2:0:0,0,0	0/0:1,0:1:2.96:0,3,19	0/1:4,4:8:30.89:94,0,31	0/1:12,0:12:81.89:82,0,168	0/1:7,0:7:32.09:32,0,37	0/1:9,0:8:60.82:61,0,117
chr10	110516976	.	C	CT	1351.87	PASS	AB=0.750;AC=13;AF=0.232;AN=56;BaseQRankSum=3.499;DP=397;FS=10.673;HRun=10;HaplotypeScore=53.1880;InbreedingCoeff=0.8152;MQ=71.30;MQ0=5;MQRankSum=-0.050;QD=19.04;ReadPosRankSum=-1.415;VQSLOD=3.2614;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:56.57:0,57,456	0/0:4,0:4:8.99:0,9,74	0/0:19,0:12:18.22:0,18,134	0/0:27,0:19:4.48:0,4,167	0/0:21,0:20:34.64:0,35,263	0/0:14,0:13:19.99:0,20,150	0/0:10,0:10:20.96:0,21,172	0/0:23,1:23:15.92:0,16,337	0/0:12,0:12:20.94:0,21,169	0/0:16,0:16:35.95:0,36,296	0/0:11,0:11:26.95:0,27,218	1/1:1,9:10:15.04:160,15,0	0/1:8,4:12:6.62:131,0,7	1/1:1,7:8:21.05:224,21,0	1/1:4,10:14:27:274,27,0	0/0:9,0:9:20.95:0,21,169	0/0:21,1:22:16.21:0,16,338	0/0:16,0:16:29.92:0,30,242	0/0:17,1:18:0.93:0,1,214	0/0:7,0:7:17.94:0,18,142	0/0:10,0:10:20.97:0,21,172	1/1:1,12:13:33.08:352,33,0	1/1:0,7:7:21.01:207,21,0	1/1:1,6:7:18.04:191,18,0	0/0:9,0:9:14.96:0,15,123	0/0:18,0:18:9.95:0,10,288	0/0:18,0:20:51.04:0,51,386	0/0:8,0:8:23.97:0,24,197
chr10	110516993	.	TTG	T	974.43	PASS	AB=0.941;AC=29;AF=0.604;AN=48;BaseQRankSum=-0.239;DP=423;FS=0.915;HRun=0;HaplotypeScore=66.1289;InbreedingCoeff=0.1254;MQ=55.89;MQ0=22;MQRankSum=0.912;QD=3.26;ReadPosRankSum=0.575;VQSLOD=1.9120;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,2:32:17.35:128,17,0	0/0:3,0:3:6:0,6,68	./.	./.	./.	1/1:3,0:12:6.15:29,6,0	1/1:7,0:11:2.84:14,3,0	1/1:26,0:25:2.92:17,3,0	1/1:4,6:10:5.88:65,6,0	0/1:17,0:16:13.78:14,0,98	0/1:11,0:10:15.54:16,0,18	0/0:10,0:11:3.01:0,3,33	0/1:12,0:12:19.96:20,0,92	0/0:8,0:8:3.01:0,3,33	0/1:13,1:14:68.84:69,0,113	0/1:12,0:12:4.74:5,0,127	0/1:21,8:30:15.14:166,0,15	0/1:15,1:16:9.51:38,0,10	1/1:11,2:13:6.01:65,6,0	1/1:5,0:5:5.74:37,6,0	1/1:11,6:17:11.82:110,12,0	0/0:15,0:13:3.01:0,3,33	0/0:8,0:7:3.01:0,3,33	0/0:11,0:9:6.02:0,6,70	1/1:3,0:6:5.68:28,6,0	1/1:15,5:20:11.99:111,12,0	1/1:18,11:28:18.05:194,18,0	./.
chr10	110517337	.	TAAAAC	T	7334.78	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=2.069;DP=662;FS=0.771;HRun=0;HaplotypeScore=146.9996;InbreedingCoeff=0.9968;MQ=80.77;MQ0=0;MQRankSum=-7.028;QD=46.72;ReadPosRankSum=2.835;VQSLOD=5.1440;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,4220	0/0:8,0:8:21.07:0,21,646	0/0:25,0:25:63.22:0,63,1767	0/0:24,0:24:63.22:0,63,1879	0/0:26,0:26:69.24:0,69,2071	0/0:22,0:21:63.17:0,63,1864	0/0:24,0:24:72.25:0,72,2214	0/0:25,0:25:66.22:0,66,1925	0/0:29,0:29:78.27:0,78,2397	0/0:30,0:30:90.31:0,90,2767	0/0:21,0:21:57.20:0,57,1738	1/1:3,27:30:66.18:1326,66,0	1/1:3,29:32:74.86:1513,75,0	1/1:1,20:21:60.21:1243,60,0	1/1:2,24:26:60.21:1244,60,0	0/0:36,0:36:93.29:0,93,2686	0/0:15,0:15:45.15:0,45,1382	0/0:7,0:7:18.06:0,18,553	0/0:20,0:20:51.04:0,51,1512	0/0:23,0:23:60.21:0,60,1747	0/0:28,0:28:81.28:0,81,2472	1/1:3,12:14:27.09:559,27,0	1/1:1,10:11:21.03:393,21,0	1/1:1,21:22:51.17:1057,51,0	0/0:16,0:16:42.14:0,42,1291	0/0:29,0:29:81.28:0,81,2472	0/0:39,0:39:99:0,111,3408	0/0:10,0:10:30.10:0,30,923
chr10	110517628	.	A	AT	1202.73	PASS	AB=0.778;AC=14;AF=0.250;AN=56;BaseQRankSum=7.273;DP=581;FS=4.765;HRun=0;HaplotypeScore=75.2589;InbreedingCoeff=0.8211;MQ=72.70;MQ0=5;MQRankSum=2.985;QD=10.02;ReadPosRankSum=1.913;VQSLOD=3.7024;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1364	0/0:13,0:13:39.12:0,39,525	0/0:39,0:18:25.60:0,26,282	0/1:32,0:15:5.33:5,0,146	0/0:24,0:24:66.16:0,66,826	0/0:23,0:23:63.21:0,63,847	0/0:19,0:19:42.13:0,42,554	0/0:32,0:32:93.29:0,93,1238	0/0:12,0:12:36.12:0,36,501	0/0:22,0:22:66.21:0,66,902	0/0:29,0:29:87.24:0,87,1171	1/1:4,8:12:17.25:169,17,0	1/1:4,11:15:33.39:281,33,0	1/1:4,9:13:12.98:145,13,0	1/1:7,11:20:42.21:331,42,0	0/0:15,0:15:45.15:0,45,628	0/0:23,0:23:66.16:0,66,878	0/0:11,0:11:27.09:0,27,376	0/0:25,0:25:71.90:0,72,953	0/0:34,0:34:99:0,102,1316	0/0:13,0:13:39.10:0,39,508	1/1:0,9:9:20.99:189,21,0	0/1:2,8:10:14.14:149,0,14	1/1:4,5:9:14.36:122,14,0	0/0:21,0:21:42.14:0,42,564	0/0:27,0:27:78.24:0,78,1058	0/0:24,0:23:72.21:0,72,967	0/0:20,0:20:57.12:0,57,794
chr10	110517629	.	AT	A	1131.59	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=3.004;DP=583;FS=4.531;HRun=12;HaplotypeScore=76.8214;InbreedingCoeff=0.8605;MQ=73.28;MQ0=5;MQRankSum=0.310;QD=9.43;ReadPosRankSum=2.398;VQSLOD=3.1273;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:92.96:0,93,902	0/0:12,1:13:6.83:0,7,251	0/0:39,0:18:16.47:0,16,89	0/1:33,0:16:4.75:5,0,89	1/1:3,21:24:50.71:388,51,0	1/1:4,18:23:49.83:377,50,0	1/1:5,14:19:18.53:198,19,0	0/0:29,1:31:48.54:0,49,642	0/0:12,0:12:30.06:0,30,304	0/0:20,1:22:27.72:0,28,448	0/0:26,3:29:13.93:0,14,575	0/0:14,0:14:23.03:0,23,135	0/0:15,0:15:34.24:0,34,180	0/0:14,0:14:22.97:0,23,127	0/0:19,0:19:44.63:0,45,245	0/0:15,0:15:34.31:0,34,338	0/0:22,0:23:29.80:0,30,340	0/0:11,0:11:27.05:0,27,273	0/0:26,0:26:35.72:0,36,516	0/0:32,1:33:60.56:0,61,762	0/0:12,0:12:27.04:0,27,267	0/0:9,0:9:23.73:0,24,120	0/0:13,0:13:28.85:0,29,178	0/0:6,0:9:14.20:0,14,71	1/1:1,20:21:41.84:325,42,0	0/0:27,0:27:68.86:0,69,671	0/0:22,0:21:57.09:0,57,566	0/0:20,0:20:54.04:0,54,528
chr10	110519747	.	TA	T	8384.72	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=16.714;DP=782;FS=5.507;HRun=1;HaplotypeScore=139.5767;InbreedingCoeff=1.0000;MQ=83.63;MQ0=0;MQRankSum=-3.592;QD=37.43;ReadPosRankSum=4.279;VQSLOD=4.1955;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,2036	0/0:13,0:13:39.13:0,39,615	0/0:25,0:25:69.17:0,69,1045	0/0:24,0:24:69.13:0,69,991	0/0:30,0:30:87.30:0,87,1390	0/0:23,0:23:66.23:0,66,1054	0/0:29,0:29:87.30:0,87,1390	0/0:21,0:21:63.21:0,63,986	0/0:23,0:23:63.21:0,63,1006	0/0:37,0:37:99:0,111,1751	0/0:24,0:24:72.25:0,72,1151	1/1:0,46:46:99:1844,132,0	1/1:0,28:28:72.24:1006,72,0	1/1:0,33:33:90.30:1257,90,0	1/1:0,36:36:99:1384,99,0	0/0:31,0:31:93.30:0,93,1464	0/0:39,0:38:99:0,114,1770	0/0:15,0:15:45.12:0,45,692	0/0:19,0:19:57.19:0,57,911	0/0:25,0:25:72.25:0,72,1151	0/0:43,0:43:99:0,129,2058	1/1:0,21:21:57.19:797,57,0	1/1:0,19:19:42.12:588,42,0	1/1:0,41:41:99:1510,108,0	0/0:26,0:26:75.26:0,75,1199	0/0:22,0:22:66.17:0,66,1005	0/0:31,0:31:90.26:0,90,1394	0/0:14,0:14:42.14:0,42,665
chr10	110519935	.	T	TGTAGCTCAGGCA	89138.11	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-6.257;DP=872;FS=0.319;HRun=0;HaplotypeScore=258.7496;InbreedingCoeff=0.9971;MQ=80.86;MQ0=0;MQRankSum=-18.528;QD=128.07;ReadPosRankSum=2.280;VQSLOD=4.7576;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,27:63:99:6682,116,0	0/0:12,0:12:36.12:0,36,1351	0/0:26,0:26:69.23:0,69,2306	0/0:44,0:44:99:0,121,3962	1/1:3,16:26:42.14:2532,42,0	1/1:10,12:24:54.19:3132,54,0	1/1:23,14:41:87.30:5027,87,0	1/1:25,9:37:99:5294,105,0	1/1:19,21:42:99:6045,108,0	0/0:41,0:41:99:0,120,4336	0/0:15,0:15:39.13:0,39,1433	1/1:20,27:48:99:7254,129,0	1/1:17,18:38:96.33:5178,96,0	1/1:18,23:42:99:6185,108,0	1/1:9,21:32:87.30:4982,87,0	0/0:38,0:38:99:0,108,3979	1/1:14,9:24:54.19:3200,54,0	1/1:8,3:11:16.42:1293,16,0	1/1:14,7:26:69.21:2878,69,0	1/1:9,12:25:45.15:2733,45,0	1/1:13,11:31:45.15:2683,45,0	1/1:14,19:38:69.22:4030,69,0	1/1:6,5:13:24.08:1454,24,0	1/1:16,8:27:51.18:2882,51,0	1/1:7,11:21:54.19:3023,54,0	1/1:13,21:39:99:5818,117,0	1/1:21,14:36:90.31:5012,90,0	1/1:9,3:12:36.12:1823,36,0
chr10	110521274	.	TCTCTGATTCCC	T	21486.47	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=17.345;DP=600;FS=6.109;HRun=0;HaplotypeScore=205.2654;InbreedingCoeff=0.9947;MQ=87.81;MQ0=0;MQRankSum=-16.848;QD=75.92;ReadPosRankSum=-0.479;VQSLOD=4.0321;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:23:48.16:1601,48,0	0/0:11,0:11:33.11:0,33,1694	0/0:32,0:32:90.31:0,90,4770	0/0:29,0:28:69.20:0,69,3019	1/1:1,24:25:66.22:2050,66,0	1/1:0,12:12:33.11:1195,33,0	1/1:1,12:13:30.10:963,30,0	1/1:5,15:20:45.15:1440,45,0	1/1:0,22:22:60.21:2161,60,0	0/0:28,0:28:81.27:0,81,4398	0/0:12,0:12:36.12:0,36,1852	0/0:31,0:31:90.31:0,90,5029	0/0:31,0:31:87.28:0,87,4339	0/0:19,0:19:54.19:0,54,2947	0/0:32,0:32:90.31:0,90,4943	0/0:28,0:28:78.27:0,78,4415	1/1:3,12:15:21.07:761,21,0	1/1:3,6:9:12.04:435,12,0	1/1:3,13:16:36.12:1243,36,0	1/1:1,23:24:63.21:1697,63,0	1/1:5,21:26:36.12:908,36,0	0/0:25,0:25:75.26:0,75,3894	0/0:11,0:11:33.11:0,33,1921	0/0:28,0:28:75.26:0,75,4217	1/1:0,19:19:48.16:1666,48,0	1/1:2,24:26:72.22:2320,72,0	1/1:1,24:25:60.21:2176,60,0	1/1:0,8:8:24.08:870,24,0
chr10	110521948	.	GATAT	G	552.97	PASS	AC=8;AF=0.160;AN=50;BaseQRankSum=1.506;DP=197;FS=1.097;HRun=0;HaplotypeScore=60.7158;InbreedingCoeff=0.6394;MQ=90.10;MQ0=4;MQRankSum=-4.377;QD=29.10;ReadPosRankSum=2.670;VQSLOD=3.2543;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:9.03:0,9,225	0/0:4,0:5:11.83:0,12,238	0/0:18,0:9:3.33:0,3,56	0/0:22,0:11:0.29:0,0,14	0/0:3,0:4:9:0,9,145	0/0:6,0:6:14.84:0,15,307	0/0:4,0:4:9.03:0,9,215	0/0:21,0:21:48.14:0,48,1146	0/0:2,0:2:6.02:0,6,144	0/0:5,0:5:12.04:0,12,301	0/0:7,0:6:6.02:0,6,150	1/1:1,4:5:15.04:229,15,0	1/1:0,4:4:12.04:205,12,0	1/1:1,3:4:6.02:102,6,0	1/1:1,5:6:9.03:153,9,0	0/0:4,0:4:9.03:0,9,226	0/0:13,0:13:30.10:0,30,741	0/0:15,0:15:39.12:0,39,878	0/0:8,0:8:21.06:0,21,455	0/0:1,0:1:3.01:0,3,75	0/0:2,0:2:3.01:0,3,75	./.	./.	./.	0/0:8,0:8:21.07:0,21,526	0/0:7,0:7:21.02:0,21,434	0/0:10,0:10:21.07:0,21,519	0/0:9,0:9:15.04:0,15,322
chr10	110521969	.	C	CAT	3889.61	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-2.212;DP=252;FS=1.352;HRun=0;HaplotypeScore=45.6197;InbreedingCoeff=0.8848;MQ=89.11;MQ0=3;MQRankSum=-0.182;QD=32.96;ReadPosRankSum=1.475;VQSLOD=5.3875;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:11:30.03:477,30,0	0/0:6,0:6:18.05:0,18,222	0/0:16,0:10:9.11:0,9,94	0/0:23,0:15:8.47:0,8,89	0/0:9,0:9:27.06:0,27,326	0/0:5,0:5:14.98:0,15,163	0/0:4,0:4:12.04:0,12,158	1/1:7,14:21:48.14:761,48,0	1/1:1,2:3:6.02:100,6,0	0/0:7,0:7:21.07:0,21,275	0/0:6,0:6:18.06:0,18,235	0/0:9,0:9:24.08:0,24,314	0/0:6,0:6:18.06:0,18,235	0/0:9,0:9:24.08:0,24,315	0/0:8,0:8:17.99:0,18,200	0/0:5,0:5:15.05:0,15,197	1/1:4,16:20:33.11:564,33,0	1/1:4,11:16:33.06:531,33,0	1/1:0,7:7:18.06:305,18,0	1/1:1,2:3:3:25,3,0	1/1:0,5:5:9.03:154,9,0	0/0:3,0:3:9.03:0,9,116	0/0:3,0:3:9.02:0,9,104	0/0:2,0:2:6.02:0,6,79	0/0:13,0:13:30.10:0,30,391	1/1:4,8:12:28.24:388,28,0	1/1:4,6:11:21.01:298,21,0	1/1:2,7:9:18.06:287,18,0
chr10	110522354	.	C	CT	2848.97	PASS	AB=0.676;AC=37;AF=0.661;AN=56;BaseQRankSum=5.940;DP=568;FS=9.519;HRun=12;HaplotypeScore=162.9382;InbreedingCoeff=0.5445;MQ=69.09;MQ0=2;MQRankSum=-5.691;QD=6.83;ReadPosRankSum=-2.582;VQSLOD=0.1222;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:31:11.96:79,12,0	0/0:6,0:8:13.94:0,14,92	0/0:40,0:24:9.32:0,9,144	0/0:25,0:17:6.39:0,6,34	1/1:31,0:30:32.71:179,33,0	1/1:10,0:18:11.73:54,12,0	0/0:9,0:7:0.15:0,0,1	1/1:36,0:35:37.66:190,38,0	1/1:14,0:14:7.29:44,7,0	0/0:23,1:28:38.58:0,39,410	0/0:19,0:22:41.79:0,42,274	0/1:7,17:25:4.92:267,0,5	1/1:6,7:13:18.91:177,19,0	1/1:8,6:15:23.19:252,23,0	0/1:6,14:21:29.55:340,0,30	0/0:17,0:18:34.68:0,35,239	0/1:14,0:14:2.57:10,0,3	1/1:16,0:16:16.54:76,17,0	1/1:23,0:23:34.40:188,34,0	1/1:9,0:15:17.09:73,17,0	1/1:6,0:6:1.35:3,1,0	1/1:6,13:20:16.81:290,17,0	0/1:7,7:17:45.92:212,0,46	0/1:6,15:21:3.39:256,0,3	1/1:20,0:21:11.02:72,11,0	1/1:25,0:23:18.76:112,19,0	1/1:24,0:22:23.73:124,24,0	1/1:10,0:9:9.52:34,10,0
chr10	110528833	.	GTC	G	1690.79	PASS	AB=0.631;AC=21;AF=0.420;AN=50;BaseQRankSum=-1.783;DP=128;FS=12.099;HRun=0;HaplotypeScore=40.1178;InbreedingCoeff=0.5076;MQ=84.26;MQ0=0;MQRankSum=-6.471;QD=26.01;ReadPosRankSum=-1.235;VQSLOD=2.9656;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,5:6:15.04:213,15,0	./.	0/0:5,0:4:9:0,9,121	0/0:7,0:7:11.77:0,12,150	0/0:0,3:3:0:0,0,0	1/1:0,2:2:6.02:88,6,0	1/1:1,15:16:45.15:717,45,0	1/1:0,2:2:3.01:49,3,0	1/1:2,4:6:18.06:289,18,0	0/0:8,0:8:24.08:0,24,437	0/0:4,0:4:9.03:0,9,165	0/0:1,0:1:3:0,3,27	0/0:2,0:2:6.01:0,6,55	0/0:7,0:7:21.03:0,21,205	0/0:4,0:4:6:0,6,61	0/0:4,0:4:12.04:0,12,219	1/1:0,5:4:9.03:147,9,0	1/1:0,1:1:3.01:49,3,0	1/1:0,3:3:6.01:60,6,0	./.	0/1:6,6:12:8.73:33,0,9	0/0:3,0:3:6:0,6,54	0/0:3,0:3:6:0,6,54	0/0:11,0:11:26.85:0,27,263	0/1:2,3:5:11.75:89,0,12	0/1:1,2:3:42.88:43,0,49	1/1:0,4:4:6.02:85,6,0	./.
chr10	110529657	.	A	AT	4117.71	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-10.734;DP=622;FS=4.412;HRun=9;HaplotypeScore=60.2408;InbreedingCoeff=0.9919;MQ=79.12;MQ0=0;MQRankSum=-2.236;QD=26.40;ReadPosRankSum=2.184;VQSLOD=4.4024;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:92.08:0,92,816	0/0:7,0:8:17.03:0,17,136	0/0:29,0:29:58.58:0,59,475	0/0:8,0:8:11.97:0,12,99	0/0:26,0:27:74:0,74,631	0/0:30,0:30:91.90:0,92,771	0/0:28,0:28:54.47:0,54,628	0/0:20,0:20:50.96:0,51,436	0/0:23,0:23:62.98:0,63,547	0/0:29,0:29:74.97:0,75,651	0/0:16,0:16:38.98:0,39,339	1/1:7,20:27:57.13:614,57,0	1/1:2,19:21:42.11:465,42,0	1/1:1,23:24:63.17:697,63,0	1/1:3,24:27:40.13:671,40,0	0/0:21,0:21:56.95:0,57,487	0/0:32,0:32:92.97:0,93,804	0/0:25,0:25:62.92:0,63,538	0/0:23,0:23:65.98:0,66,571	0/0:21,0:21:50.98:0,51,440	0/0:9,0:9:26.99:0,27,232	1/1:2,18:20:51.14:564,51,0	1/1:1,14:15:42.11:465,42,0	1/1:4,18:22:59.95:642,60,0	0/0:19,0:19:53.99:0,54,469	0/0:24,0:24:62.95:0,63,537	0/0:29,0:29:80.90:0,81,688	0/0:9,0:9:23.99:0,24,208
chr10	110530383	.	CAAA	C	4359.01	PASS	AB=0.630;AC=30;AF=0.536;AN=56;BaseQRankSum=-1.726;DP=557;FS=0.000;HRun=15;HaplotypeScore=124.7256;InbreedingCoeff=0.2655;MQ=70.73;MQ0=0;MQRankSum=-2.468;QD=10.30;ReadPosRankSum=4.278;VQSLOD=1.8488;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,1:34:0.96:1,0,87	0/0:14,0:15:36.06:0,36,561	0/0:13,0:11:24.75:0,25,232	0/1:11,0:10:0.50:1,0,71	1/1:5,24:31:44.11:502,44,0	1/1:1,10:12:23.98:253,24,0	1/1:2,15:17:36.10:404,36,0	0/1:7,3:24:30.74:74,0,31	0/0:7,0:16:12.46:0,12,28	0/0:28,0:28:51.16:0,51,822	0/0:15,0:15:32.31:0,32,502	1/1:8,15:24:39.57:450,40,0	1/1:8,10:18:29.90:336,30,0	1/1:8,16:26:43.34:466,43,0	0/1:10,14:26:2.04:333,0,2	0/0:25,0:26:65.17:0,65,996	0/1:3,3:26:38.23:94,0,38	0/1:5,1:19:16.71:17,0,33	0/1:6,0:12:13:13,0,51	0/1:5,1:20:6.72:7,0,77	0/0:6,1:20:18.48:0,18,110	1/1:9,16:28:50.92:551,51,0	0/1:4,9:16:6.35:174,0,6	1/1:2,13:16:33:354,33,0	1/1:3,9:16:26.08:254,26,0	0/1:7,1:19:14.45:17,0,14	0/1:3,2:14:30.24:46,0,30	0/1:7,1:14:14.20:14,0,65
chr10	110533284	.	C	CA	628.20	PASS	AC=14;AF=0.269;AN=52;BaseQRankSum=2.822;DP=352;FS=17.559;HRun=9;HaplotypeScore=94.7051;InbreedingCoeff=0.8022;MQ=43.54;MQ0=6;MQRankSum=-1.361;QD=8.61;ReadPosRankSum=-5.355;VQSLOD=-0.6049;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:13.48:0,13,162	0/0:7,0:7:11.86:0,12,102	./.	./.	0/0:6,0:6:5.73:0,6,52	0/0:14,0:14:5.88:0,6,131	0/0:14,0:14:10.11:0,10,157	0/0:21,0:20:31.36:0,31,275	0/0:16,0:16:26.62:0,27,227	0/0:9,0:9:17.98:0,18,156	0/0:15,0:15:3.95:0,4,85	1/1:4,9:12:27.89:285,28,0	1/1:11,6:17:15.06:130,15,0	1/1:8,1:9:3.48:34,3,0	1/1:6,2:8:9.27:76,9,0	0/0:8,0:8:8.93:0,9,74	0/0:26,0:24:24.01:0,24,201	0/0:19,0:18:23.18:0,23,226	0/0:13,0:13:19.79:0,20,178	0/0:15,0:15:20.94:0,21,177	0/0:6,0:6:8.99:0,9,78	1/1:2,6:8:13.34:122,13,0	1/1:8,6:14:6.45:54,6,0	1/1:0,4:4:9.02:99,9,0	0/0:13,0:13:17.58:0,18,154	0/0:12,0:11:23.97:0,24,202	0/0:24,0:23:25.99:0,26,229	0/0:15,0:13:10.09:0,10,100
chr10	110539849	.	TAAAAAAAAAAAAA	T	14404.56	PASS	AB=0.600;AC=25;AF=0.446;AN=56;BaseQRankSum=3.618;DP=531;FS=23.908;HRun=22;HaplotypeScore=169.3911;InbreedingCoeff=0.5830;MQ=55.59;MQ0=27;MQRankSum=-6.974;QD=57.85;ReadPosRankSum=7.941;VQSLOD=-0.2235;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,13:20:71.59:932,0,72	0/0:3,0:6:15.05:0,15,813	0/0:68,0:17:27.20:0,27,816	0/0:81,0:20:43.07:0,43,1039	1/1:7,20:27:56.54:1600,57,0	1/1:4,13:17:32.84:1087,33,0	1/1:4,9:13:23.77:791,24,0	1/1:13,11:22:32.23:791,32,0	1/1:2,11:13:29.98:988,30,0	0/0:15,0:16:48.16:0,48,2511	0/0:17,0:18:42.14:0,42,2056	0/0:9,0:10:30.10:0,30,1083	0/0:4,0:7:18.06:0,18,664	0/0:8,0:12:21.07:0,21,808	0/0:10,0:18:33.11:0,33,1139	0/0:7,0:7:18.06:0,18,1051	0/1:6,8:14:23.33:668,0,23	0/1:6,7:13:91.94:476,0,92	1/1:5,7:12:20.87:692,21,0	0/1:2,16:18:42.51:1365,0,43	1/1:3,0:3:2.77:82,3,0	0/0:5,0:8:21.05:0,21,550	0/0:12,0:18:45.15:0,45,1492	0/0:4,0:7:3.01:0,3,103	1/1:4,14:18:35.73:1180,36,0	0/1:5,14:19:61.65:1281,0,62	1/1:3,20:23:50.85:1680,51,0	1/1:5,10:14:24.08:791,24,0
chr10	110540375	.	G	GA	1357.70	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-5.998;DP=531;FS=3.304;HRun=10;HaplotypeScore=51.4094;InbreedingCoeff=0.8813;MQ=59.45;MQ0=5;MQRankSum=1.641;QD=16.76;ReadPosRankSum=-1.263;VQSLOD=3.6444;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:92.81:0,93,758	0/0:8,0:8:20.96:0,21,169	0/0:8,0:5:14.97:0,15,121	0/1:3,0:2:0:0,0,0	1/1:9,15:25:44.91:449,45,0	1/1:4,8:12:21.02:213,21,0	1/1:5,19:24:59.90:597,60,0	0/0:27,0:26:68.88:0,69,563	0/0:16,0:16:41.92:0,42,341	0/0:26,0:26:61.95:0,62,499	0/0:18,0:18:38.89:0,39,311	0/0:21,1:22:15.95:0,16,337	0/0:12,0:12:29.95:0,30,246	0/0:19,0:19:41.93:0,42,342	0/0:19,1:20:15.89:0,16,327	0/0:17,0:17:41.94:0,42,345	0/0:29,0:29:68.91:0,69,566	0/0:23,0:23:56.66:0,57,455	0/0:18,0:18:35.90:0,36,292	0/0:18,0:17:38.95:0,39,320	0/0:20,0:19:38.94:0,39,320	0/0:12,1:14:0.96:0,1,209	0/0:20,0:20:38.91:0,39,316	0/0:16,0:16:44.95:0,45,369	1/1:4,12:16:24.06:256,24,0	0/0:20,0:19:12.45:0,12,267	0/0:26,0:26:68.88:0,69,563	0/0:11,0:10:29.97:0,30,246
chr10	110540964	.	G	GTTC	3680.44	PASS	AB=0.812;AC=17;AF=0.304;AN=56;BaseQRankSum=14.423;DP=847;FS=62.813;HRun=0;HaplotypeScore=125.3458;InbreedingCoeff=-0.4354;MQ=72.37;MQ0=0;MQRankSum=-11.174;QD=5.93;ReadPosRankSum=-2.912;VQSLOD=0.0339;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:40,12:52:99:448,0,1904	0/0:16,0:16:48.10:0,48,796	0/1:20,4:26:99:268,0,813	0/1:19,4:24:99:296,0,822	0/0:19,0:19:51.13:0,51,876	0/1:23,10:33:99:285,0,1100	0/1:30,10:39:99:468,0,1157	0/1:27,4:31:99:142,0,1307	0/1:23,9:32:99:150,0,1108	0/0:19,0:19:54.16:0,54,918	0/0:11,0:11:33.11:0,33,614	0/1:34,11:45:99:112,0,1699	0/1:23,12:35:99:219,0,1096	0/1:25,15:40:99:284,0,1138	0/0:28,9:37:22.48:0,22,1304	0/0:27,5:32:67.75:0,68,1210	0/1:35,11:46:99:297,0,1666	0/1:33,6:39:45.11:45,0,1643	0/1:12,11:23:99:473,0,476	0/0:17,0:17:48.16:0,48,894	0/1:64,11:75:56.05:56,0,3198	0/0:12,0:12:36.11:0,36,631	0/1:14,1:15:24.44:24,0,669	0/1:31,6:36:16.27:16,0,1432	0/0:28,0:28:81.24:0,81,1410	0/1:22,6:28:95.17:95,0,946	0/0:23,5:28:66.20:0,66,1166	0/0:7,0:7:21.03:0,21,355
chr10	110542173	.	T	TTTCATTCA	11518.12	PASS	AB=0.786;AC=43;AF=0.768;AN=56;BaseQRankSum=11.716;DP=666;FS=2.840;HRun=0;HaplotypeScore=193.5224;InbreedingCoeff=0.8905;MQ=68.72;MQ0=2;MQRankSum=-2.361;QD=20.87;ReadPosRankSum=1.222;VQSLOD=4.5814;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:43:68.89:561,69,0	0/0:5,0:5:15.04:0,15,303	0/0:22,0:21:18.06:0,18,372	0/0:13,0:12:18.06:0,18,424	1/1:18,0:38:63.22:1807,63,0	1/1:9,0:23:33.11:1077,33,0	1/1:19,0:19:20.80:309,21,0	1/1:11,0:25:50.83:497,51,0	1/1:6,0:23:41.94:343,42,0	0/0:28,0:28:66.21:0,66,1538	0/0:18,0:18:39.13:0,39,911	1/1:11,0:27:38.55:305,39,0	1/1:6,0:19:29.96:246,30,0	1/1:6,0:26:38.47:334,38,0	1/1:4,0:21:41.95:345,42,0	0/0:28,0:28:63.22:0,63,1586	1/1:10,0:27:47.97:453,48,0	1/1:7,0:27:59.42:476,59,0	0/1:16,0:22:47.28:174,0,47	1/1:9,0:18:29.88:281,30,0	1/1:7,0:18:26.97:222,27,0	1/1:6,0:22:44.98:424,45,0	1/1:4,0:20:35.81:290,36,0	1/1:4,0:16:17.98:148,18,0	1/1:8,1:33:51.17:1728,51,0	1/1:4,0:33:83.88:688,84,0	1/1:6,0:31:62.92:517,63,0	1/1:5,0:20:35.95:293,36,0
chr10	110543448	.	CT	C	4653.88	PASS	AB=0.769;AC=31;AF=0.554;AN=56;BaseQRankSum=8.381;DP=551;FS=3.405;HRun=12;HaplotypeScore=57.2417;InbreedingCoeff=0.5478;MQ=74.73;MQ0=2;MQRankSum=0.929;QD=12.25;ReadPosRankSum=1.256;VQSLOD=4.7084;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:16:37.90:285,38,0	0/0:12,1:13:9.80:0,10,264	0/0:22,0:15:7.35:0,7,72	0/0:10,0:9:11.03:0,11,65	1/1:9,25:36:60.61:444,61,0	1/1:4,18:22:47.78:371,48,0	0/1:3,7:10:6.53:139,0,7	1/1:10,16:28:14.46:274,14,0	1/1:7,12:20:7.40:231,7,0	0/0:17,2:21:1.24:0,1,332	0/0:12,1:14:9.66:0,10,265	0/0:18,0:20:38.87:0,39,369	0/0:20,1:21:2.39:0,2,365	0/0:16,0:16:45.07:0,45,448	0/0:24,0:26:59.95:0,60,593	0/1:12,2:14:16.58:17,0,196	0/1:7,13:20:17:240,0,17	1/1:7,14:21:8.40:248,8,0	1/1:5,10:18:5.52:196,6,0	1/1:3,21:25:40.11:431,40,0	1/1:2,7:10:22.71:157,23,0	0/1:15,2:17:3.99:4,0,281	0/1:19,3:22:15.62:16,0,396	0/0:7,0:8:20.87:0,21,191	1/1:6,31:37:44.22:527,44,0	1/1:6,13:19:34.97:277,35,0	1/1:4,23:27:65.13:496,65,0	1/1:4,14:18:38.84:302,39,0
chr10	110544462	.	CAAAGA	C	21872.85	PASS	AB=0.522;AC=29;AF=0.518;AN=56;BaseQRankSum=19.264;DP=887;FS=2.878;HRun=0;HaplotypeScore=176.8447;InbreedingCoeff=0.9284;MQ=82.48;MQ0=0;MQRankSum=-12.052;QD=48.18;ReadPosRankSum=3.137;VQSLOD=5.2625;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,51:53:99:2737,123,0	0/0:12,0:12:36.12:0,36,1099	0/0:35,0:35:99:0,102,2621	0/0:23,0:23:62.92:0,63,1412	1/1:0,29:29:63.13:1296,63,0	1/1:0,15:15:33.11:734,33,0	1/1:1,36:37:81.28:1793,81,0	1/1:2,43:45:99:2445,123,0	1/1:0,25:25:66.23:1467,66,0	0/0:46,0:46:99:0,135,4113	0/0:24,0:24:72.25:0,72,2314	0/0:39,0:39:99:0,114,3352	0/0:46,0:46:99:0,135,4275	0/0:35,0:35:99:0,105,3253	0/0:44,0:44:99:0,132,3992	0/0:42,0:42:99:0,126,3590	1/1:0,31:31:71.77:1588,72,0	1/1:1,25:26:48.16:1040,48,0	1/1:0,21:22:63.10:1111,63,0	1/1:0,18:18:42.02:828,42,0	1/1:0,41:41:57.12:1226,57,0	0/0:21,0:21:60.18:0,60,1707	0/0:21,0:21:63.18:0,63,1720	0/0:45,0:45:99:0,132,4024	1/1:0,27:27:48.16:1035,48,0	0/1:3,32:35:51.67:1802,0,52	1/1:0,37:37:90.31:1986,90,0	1/1:1,12:13:36.12:784,36,0
chr10	110545528	.	A	AG	27232.04	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-14.068;DP=765;FS=16.539;HRun=0;HaplotypeScore=72.9931;InbreedingCoeff=1.0000;MQ=69.69;MQ0=1;MQRankSum=-4.014;QD=43.57;ReadPosRankSum=4.011;VQSLOD=3.3864;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:42:99:1839,117,0	0/0:18,0:18:54.18:0,54,751	0/0:22,0:22:66.21:0,66,896	0/0:14,0:14:36.04:0,36,460	1/1:0,23:23:69.24:1101,69,0	1/1:1,22:23:63.21:1006,63,0	1/1:0,21:21:60.20:959,60,0	1/1:1,29:30:87.28:1360,87,0	1/1:1,23:24:63.21:1007,63,0	0/0:34,0:34:99:0,99,1385	0/0:21,0:21:63.19:0,63,838	1/1:0,25:25:69.24:1103,69,0	1/1:1,31:32:84.29:1338,84,0	1/1:0,27:27:75.26:1198,75,0	1/1:0,36:36:96.16:1533,96,0	0/0:30,0:30:90.24:0,90,1186	1/1:0,39:39:99:1628,102,0	1/1:0,17:17:51.17:815,51,0	1/1:1,30:31:90.31:1433,90,0	1/1:3,24:27:69.24:1102,69,0	1/1:0,28:28:75.26:1199,75,0	1/1:0,30:30:72.25:1150,72,0	1/1:0,31:31:81.21:1264,81,0	1/1:0,20:20:45.15:719,45,0	1/1:1,22:23:60.19:934,60,0	1/1:0,34:34:99:1627,102,0	1/1:0,46:46:99:2151,135,0	1/1:0,16:16:48.16:765,48,0
chr10	110545577	.	A	AAAAC	4731.92	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-8.028;DP=779;FS=0.000;HRun=0;HaplotypeScore=162.4110;InbreedingCoeff=0.9388;MQ=60.62;MQ0=1;MQRankSum=-1.114;QD=45.50;ReadPosRankSum=-1.241;VQSLOD=4.7600;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:81.22:0,81,1255	0/0:19,0:19:42.13:0,42,665	0/0:10,0:6:6.02:0,6,98	0/0:14,0:11:5.14:0,5,97	1/1:9,16:26:48.16:1129,48,0	1/1:7,21:28:60.21:1445,60,0	1/1:10,11:21:42.14:969,42,0	0/0:30,0:30:48.16:0,48,778	0/0:27,0:27:63.20:0,63,1008	0/0:37,0:37:78.25:0,78,1236	0/0:25,0:25:60.20:0,60,983	0/0:29,0:29:57.19:0,57,934	0/0:21,0:21:45.12:0,45,678	0/0:31,0:31:63.19:0,63,985	0/0:34,0:34:72.24:0,72,1160	0/0:29,0:29:75.25:0,75,1198	0/0:35,0:35:54.17:0,54,860	0/0:18,0:18:42.08:0,42,614	0/0:28,0:28:45.15:0,45,728	0/0:37,0:37:89.08:0,89,1414	0/0:40,0:40:96.31:0,96,1547	0/0:22,0:22:57.15:0,57,904	0/0:29,0:29:51.17:0,51,826	0/0:24,0:24:51.16:0,51,811	1/1:11,18:29:51.17:1188,51,0	0/0:39,0:40:93.31:0,93,1501	0/0:37,0:37:84.22:0,84,1291	0/0:16,0:16:24.05:0,24,343
chr10	110546340	.	AGTAT	A	1135.84	PASS	AC=20;AF=0.385;AN=52;BaseQRankSum=2.203;DP=395;FS=4.552;HRun=0;HaplotypeScore=84.2539;InbreedingCoeff=0.7512;MQ=66.55;MQ0=2;MQRankSum=-0.997;QD=7.89;ReadPosRankSum=0.029;VQSLOD=1.9380;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,4:17:6.02:93,6,0	0/0:8,0:8:9.03:0,9,202	./.	0/0:24,0:16:2.96:0,3,19	0/0:12,0:12:21.07:0,21,463	0/0:10,0:10:9.03:0,9,151	0/0:14,0:14:9.03:0,9,190	1/1:32,0:32:3.01:46,3,0	1/1:7,3:10:9.03:140,9,0	0/0:11,0:11:21.07:0,21,488	0/0:12,0:12:15.05:0,15,333	0/0:9,0:10:11.29:0,11,193	0/0:18,0:18:18.07:0,18,275	0/0:15,0:15:7.07:0,7,59	0/0:22,0:23:4.96:0,5,312	0/0:16,0:16:9.03:0,9,202	1/1:12,3:15:6.02:94,6,0	1/1:7,3:10:9.03:133,9,0	./.	1/1:2,5:7:11.99:159,12,0	1/1:11,2:13:6.02:94,6,0	0/0:11,0:11:18.05:0,18,285	0/0:12,0:13:12.04:0,12,182	0/0:11,0:11:6.02:0,6,94	0/0:17,0:17:24.07:0,24,522	1/1:8,2:10:6.02:94,6,0	1/1:12,5:17:14.79:233,15,0	1/1:11,2:13:15.05:233,15,0
chr10	110546384	.	TA	T	554	PASS	AB=1.000;AC=16;AF=0.296;AN=54;BaseQRankSum=5.638;DP=281;FS=0.000;HRun=1;HaplotypeScore=67.2002;InbreedingCoeff=0.6072;MQ=47.03;MQ0=24;MQRankSum=-2.307;QD=7.69;ReadPosRankSum=2.019;VQSLOD=0.8287;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:5.98:0,6,48	0/0:4,0:4:12.01:0,12,166	0/0:24,0:4:6:0,6,94	0/0:61,0:3:0.47:0,0,1	0/0:10,0:10:24.07:0,24,360	./.	0/0:3,0:3:6.02:0,6,96	0/0:28,0:24:32.35:0,32,488	0/0:3,0:3:6.48:0,6,58	0/0:9,0:9:27.08:0,27,409	0/0:7,0:6:18.03:0,18,242	1/1:2,4:6:11.51:90,12,0	1/1:2,6:8:19.14:131,19,0	1/1:4,4:8:9.50:101,9,0	1/1:7,10:17:12.81:259,13,0	0/0:5,0:5:15.04:0,15,217	0/1:14,0:14:27.01:27,0,84	0/0:14,0:14:2.58:0,3,20	0/1:6,0:5:7.26:7,0,13	0/0:5,0:5:9.01:0,9,85	0/0:3,0:3:6.01:0,6,56	1/1:1,4:5:8.33:26,8,0	1/1:1,3:4:9.80:39,10,0	1/1:2,2:4:5.05:48,5,0	0/0:9,0:9:27.09:0,27,431	0/0:3,0:3:6.44:0,6,46	0/0:8,0:8:14:0,14,107	0/0:5,0:6:8.93:0,9,40
chr10	110546386	.	TTATATATA	T	2956.62	PASS	AB=0.952;AC=24;AF=0.522;AN=46;BaseQRankSum=4.447;DP=268;FS=5.054;HRun=0;HaplotypeScore=78.8068;InbreedingCoeff=0.5387;MQ=46.34;MQ0=24;MQRankSum=-3.783;QD=24.04;ReadPosRankSum=1.176;VQSLOD=2.7178;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:5.10:38,5,0	0/0:3,0:3:3.01:0,3,125	0/0:24,0:4:5.98:0,6,57	0/0:60,0:3:0:0,0,0	0/0:9,0:9:9.03:0,9,273	./.	0/0:3,0:4:6.02:0,6,110	0/1:25,3:24:27.09:978,0,27	1/1:3,0:3:3:25,3,0	0/0:8,0:8:6.02:0,6,254	0/0:5,0:4:3.01:0,3,78	1/1:5,0:5:8.54:77,9,0	1/1:8,0:8:5.52:65,6,0	1/1:8,0:8:14.42:126,14,0	1/1:16,0:16:14.48:165,14,0	0/0:4,0:4:9.03:0,9,330	1/1:10,0:13:26.33:446,26,0	1/1:8,5:13:18.06:415,18,0	1/1:3,2:4:6.02:147,6,0	./.	./.	./.	0/0:4,0:4:0:0,0,0	./.	0/0:9,0:9:18.06:0,18,533	0/1:4,0:4:2.95:61,0,3	1/1:8,0:8:9.03:215,9,0	1/1:6,0:5:15.05:355,15,0
chr10	110546391	.	TATA	T	1461.35	PASS	AB=0.933;AC=24;AF=0.444;AN=54;BaseQRankSum=9.024;DP=262;FS=8.271;HRun=0;HaplotypeScore=67.5685;InbreedingCoeff=0.4692;MQ=45.17;MQ0=18;MQRankSum=-6.241;QD=10.91;ReadPosRankSum=3.824;VQSLOD=1.9283;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:5:8.54:9,0,53	0/0:3,0:3:9.03:0,9,150	0/0:21,0:4:6.01:0,6,63	0/0:61,0:3:0:0,0,0	0/0:9,0:9:21.07:0,21,331	./.	0/0:4,0:4:12.04:0,12,196	0/1:32,0:28:99:323,0,242	0/0:2,0:2:5.98:0,6,57	0/0:6,0:6:18.06:0,18,300	0/0:4,0:3:9.03:0,9,150	1/1:1,1:5:14.45:136,14,0	1/1:2,3:8:19.91:179,20,0	1/1:4,2:8:16.24:179,16,0	1/1:5,3:12:23.56:199,24,0	0/0:3,0:3:9.03:0,9,222	0/1:15,0:15:75.63:128,0,76	1/1:15,0:15:20.70:183,21,0	1/1:5,0:4:5.80:46,6,0	0/0:3,0:3:9.03:0,9,111	0/0:3,0:3:6.02:0,6,75	1/1:0,4:4:10.28:39,10,0	1/1:1,3:4:10.87:50,11,0	0/1:3,1:4:3.90:4,0,9	0/0:9,0:9:27.08:0,27,508	0/1:3,0:4:2.64:3,0,70	0/1:7,0:7:42.60:43,0,128	1/1:6,0:5:14.86:126,15,0
chr10	110546393	.	TA	T	785.01	PASS	AB=0.928;AC=21;AF=0.389;AN=54;BaseQRankSum=7.970;DP=252;FS=1.712;HRun=1;HaplotypeScore=64.2066;InbreedingCoeff=0.3914;MQ=50.35;MQ0=15;MQRankSum=-7.327;QD=6.28;ReadPosRankSum=3.516;VQSLOD=0.8352;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:6:8.52:9,0,65	0/0:2,0:2:6.02:0,6,86	0/0:21,0:4:6:0,6,61	0/0:59,0:5:2.09:0,2,23	0/0:8,0:8:18.05:0,18,235	./.	0/0:3,0:3:9.01:0,9,110	0/1:24,5:26:99:183,0,233	0/0:2,0:2:6.02:0,6,75	0/0:6,0:6:18.06:0,18,249	0/0:4,0:3:9.03:0,9,124	1/1:5,0:5:10.47:85,10,0	1/1:7,1:8:9.29:102,9,0	1/1:8,0:8:14.89:136,15,0	1/1:13,0:13:2.09:103,2,0	0/0:3,0:3:9.03:0,9,144	0/1:11,4:15:81.78:82,0,85	1/1:13,2:15:17.67:159,18,0	1/1:5,0:4:3.40:21,3,0	0/0:2,0:2:6.01:0,6,63	0/0:3,0:3:6.02:0,6,76	1/1:4,0:4:1.89:6,2,0	0/1:4,0:4:0.56:1,0,1	0/0:3,0:3:1.25:0,1,3	0/0:7,0:7:21.07:0,21,316	0/0:4,0:4:1.66:0,2,70	0/1:7,0:7:7.20:7,0,121	1/1:6,0:5:11.54:58,12,0
chr10	110546399	.	TATATATATAATA	T	1546.04	PASS	AB=1.000;AC=12;AF=0.250;AN=48;BaseQRankSum=-0.628;DP=232;FS=2.616;HRun=0;HaplotypeScore=92.4202;InbreedingCoeff=0.5090;MQ=56.09;MQ0=9;MQRankSum=-4.479;QD=17.37;ReadPosRankSum=1.044;VQSLOD=2.1993;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:13.93:0,14,230	0/0:2,0:2:5.99:0,6,213	0/0:16,0:5:7.41:0,7,56	0/0:51,0:7:7.21:0,7,56	0/0:4,0:4:9.03:0,9,353	./.	0/0:4,0:4:12.04:0,12,318	0/1:31,0:30:16.84:17,0,764	0/0:1,0:1:0.89:0,1,2	0/0:2,0:2:6.02:0,6,382	0/0:2,0:1:3.01:0,3,73	1/1:4,0:5:14.97:296,15,0	1/1:8,0:9:12.96:283,13,0	1/1:3,5:8:21.04:461,21,0	1/1:6,6:12:24.08:595,24,0	0/0:4,0:4:12.04:0,12,548	0/0:13,0:14:27.69:0,28,344	0/1:17,0:17:27.62:28,0,177	0/0:5,0:4:4.44:0,4,15	0/0:1,0:1:3:0,3,25	./.	./.	1/1:4,0:5:2.84:20,3,0	./.	0/0:6,0:6:18.06:0,18,726	0/0:5,0:5:14.33:0,14,173	0/0:5,0:5:10.51:0,11,90	0/0:8,0:7:5.49:0,5,75
chr10	110546400	.	AT	A	967.11	PASS	AB=0.694;AC=13;AF=0.283;AN=46;BaseQRankSum=1.693;DP=226;FS=4.725;HRun=1;HaplotypeScore=67.6543;InbreedingCoeff=0.2390;MQ=59.25;MQ0=9;MQRankSum=-3.350;QD=10.63;ReadPosRankSum=3.751;VQSLOD=1.8997;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:2,3:5:12.19:12,0,34	0/0:1,0:1:3.01:0,3,48	0/0:15,0:5:5.96:0,6,57	0/0:53,0:8:6:0,6,55	0/0:4,0:4:9.03:0,9,134	./.	0/0:4,0:4:12.04:0,12,162	0/1:23,12:32:99:444,0,323	1/1:1,0:1:3:25,3,0	0/0:2,0:2:6.02:0,6,96	0/0:2,0:1:3.01:0,3,48	0/0:5,0:5:8.28:0,8,51	0/0:10,0:10:9.52:0,10,69	0/0:8,0:8:19.05:0,19,170	0/0:12,0:12:14.11:0,14,167	0/0:4,0:4:12.04:0,12,182	0/1:8,7:15:72.09:168,0,72	1/1:9,8:17:12.43:182,12,0	1/1:2,1:3:5.36:45,5,0	./.	./.	./.	0/0:5,0:5:0:0,0,0	./.	0/0:6,0:6:18.06:0,18,277	0/1:2,1:3:21.73:31,0,22	0/1:2,2:4:26.32:69,0,26	1/1:5,3:7:14.23:135,14,0
chr10	110546403	.	TATATA	T	1908.02	PASS	AB=0.741;AC=21;AF=0.500;AN=42;BaseQRankSum=7.861;DP=220;FS=15.672;HRun=0;HaplotypeScore=74.2326;InbreedingCoeff=0.3510;MQ=60.46;MQ0=9;MQRankSum=-7.037;QD=13.83;ReadPosRankSum=4.800;VQSLOD=1.3557;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:3,2:5:8.74:9,0,14	0/0:1,0:1:3.01:0,3,92	1/1:11,0:4:0.89:2,1,0	0/0:50,0:9:8.54:0,9,74	0/0:5,0:5:9.03:0,9,167	./.	0/0:4,0:4:12.04:0,12,224	0/1:30,7:34:88.19:538,0,88	./.	0/0:2,0:2:6.02:0,6,184	0/0:2,0:1:3.01:0,3,40	1/1:5,0:5:8.72:61,9,0	1/1:9,0:9:11.23:57,11,0	1/1:8,0:8:3.87:90,4,0	1/1:12,0:12:22.18:138,22,0	0/0:4,0:4:12.04:0,12,264	0/1:8,7:15:5.56:326,0,6	1/1:11,6:17:17.71:380,18,0	1/1:2,1:3:6:81,6,0	./.	./.	./.	./.	./.	0/0:6,0:6:15.05:0,15,347	0/1:3,1:4:22.99:47,0,23	0/1:2,2:4:2.44:125,0,2	1/1:5,3:7:4.52:201,5,0
chr10	110546405	.	TATAATA	T	1150.80	PASS	AB=1.000;AC=18;AF=0.375;AN=48;BaseQRankSum=6.785;DP=216;FS=5.923;HRun=0;HaplotypeScore=76.7487;InbreedingCoeff=0.2525;MQ=66.38;MQ0=8;MQRankSum=-5.869;QD=9.28;ReadPosRankSum=5.231;VQSLOD=0.5454;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:12.03:0,12,157	0/0:2,0:2:6.02:0,6,181	0/0:10,0:5:1.55:0,2,4	0/0:45,0:10:7.27:0,7,34	0/0:5,0:5:12.04:0,12,272	./.	0/0:4,0:4:12.04:0,12,261	0/1:38,0:35:10.32:10,0,863	./.	0/0:2,0:2:6.02:0,6,226	0/0:2,0:1:3.01:0,3,72	1/1:2,3:5:9.97:184,10,0	1/1:7,1:8:13.28:194,13,0	1/1:6,2:8:21.04:345,21,0	1/1:7,3:10:24.08:430,24,0	0/0:4,0:4:12.04:0,12,370	0/1:15,0:15:55.08:55,0,210	0/1:17,0:17:9.39:9,0,104	1/1:3,0:3:2.07:15,2,0	0/0:1,0:1:2.74:0,3,12	0/0:2,0:2:2.80:0,3,13	./.	1/1:4,0:4:0.47:1,0,0	./.	0/0:6,0:6:18.06:0,18,490	0/1:4,0:4:4.23:4,0,121	0/1:4,0:4:22.64:23,0,43	0/1:8,0:7:32.41:32,0,39
chr10	110546407	.	TA	T	821.97	PASS	AB=0.845;AC=24;AF=0.522;AN=46;BaseQRankSum=6.820;DP=216;FS=4.310;HRun=2;HaplotypeScore=66.1170;InbreedingCoeff=0.2435;MQ=67.04;MQ0=8;MQRankSum=-6.522;QD=5.87;ReadPosRankSum=2.819;VQSLOD=1.0594;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:4,2:6:19.46:29,0,19	0/0:2,0:2:6.02:0,6,85	1/1:8,0:4:1.55:4,2,0	0/0:45,0:10:8.59:0,9,73	0/0:5,0:5:11.93:0,12,141	./.	0/0:4,0:4:12.04:0,12,164	0/1:38,2:37:99:177,0,177	./.	0/0:2,0:2:6.02:0,6,90	0/0:3,0:2:4.26:0,4,43	1/1:4,0:4:7.28:28,7,0	1/1:2,1:8:9.93:41,10,0	1/1:8,0:8:2.85:50,3,0	1/1:9,0:9:19.76:78,20,0	0/0:4,0:4:12.04:0,12,170	0/1:13,3:16:33.83:128,0,34	0/1:15,3:18:0.51:205,0,1	1/1:3,0:3:2.72:29,3,0	1/1:0,2:2:3:26,3,0	1/1:1,1:2:3:25,3,0	./.	./.	./.	0/0:6,0:6:15.05:0,15,215	0/1:2,2:4:17.16:17,0,54	0/1:4,0:4:6.11:48,0,6	1/1:8,0:7:0.83:88,1,0
chr10	110546423	.	A	ATT	4550.10	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-1.231;DP=249;FS=15.070;HRun=5;HaplotypeScore=61.5827;InbreedingCoeff=0.7096;MQ=73.41;MQ0=1;MQRankSum=-0.403;QD=31.17;ReadPosRankSum=0.722;VQSLOD=3.2298;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:21.04:283,21,0	0/0:3,0:3:9.02:0,9,101	0/0:6,0:5:1.01:0,1,36	0/0:22,0:10:8.15:0,8,42	1/1:9,0:9:1.44:116,1,0	1/1:1,0:1:3:27,3,0	0/0:4,0:4:7.35:0,7,27	1/1:34,8:42:99:1738,111,0	1/1:3,0:3:6:54,6,0	0/0:8,0:8:18.02:0,18,178	0/0:7,0:7:17.96:0,18,144	0/0:7,0:7:14.99:0,15,127	0/0:7,0:7:2.16:0,2,46	0/0:9,0:9:24:0,24,216	0/0:11,0:11:19.24:0,19,160	0/0:5,0:5:15.02:0,15,164	1/1:13,4:17:51.04:695,51,0	1/1:18,2:20:42.15:584,42,0	1/1:4,0:4:6.01:70,6,0	1/1:5,0:5:8.99:100,9,0	1/1:4,0:4:9.01:104,9,0	0/0:5,0:5:11.91:0,12,90	0/0:4,0:4:5.99:0,6,49	0/0:5,0:5:11.96:0,12,94	0/1:8,0:8:14.58:90,0,15	1/1:6,0:6:15.03:198,15,0	1/1:10,0:10:27.04:297,27,0	1/1:8,0:8:15.04:195,15,0
chr10	110548460	.	AC	A	2413.39	PASS	AB=0.789;AC=21;AF=0.375;AN=56;BaseQRankSum=17.976;DP=1065;FS=177.814;HRun=3;HaplotypeScore=147.9604;InbreedingCoeff=-0.5879;MQ=78.84;MQ0=0;MQRankSum=-14.361;QD=3.30;ReadPosRankSum=-0.810;VQSLOD=-0.4860;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,12:67:14.28:0,14,1952	0/1:14,8:22:99:196,0,542	0/1:21,6:27:99:129,0,709	0/1:24,8:32:99:179,0,826	0/1:37,8:45:2.80:3,0,1287	0/0:27,8:35:44.15:0,44,1085	0/1:30,16:46:86.29:86,0,1107	0/1:22,9:31:99:210,0,817	0/0:32,14:46:62.20:0,62,1325	0/1:32,9:41:99:186,0,1103	0/0:17,6:23:14.07:0,14,653	0/1:45,14:59:69.27:69,0,1788	0/1:33,11:44:99:114,0,1164	0/1:32,13:45:46.09:46,0,1191	0/1:39,14:53:64.99:65,0,1370	0/0:33,5:38:25.07:0,25,1246	0/1:19,8:27:82.29:82,0,693	0/1:24,5:29:99:104,0,862	0/1:16,7:23:99:129,0,548	0/1:18,5:23:85.10:85,0,652	0/0:67,7:74:87.60:0,88,2573	0/1:32,11:43:99:114,0,1149	0/1:20,6:26:44.92:45,0,753	0/0:43,8:50:99:0,126,1814	0/1:15,9:24:99:233,0,461	0/1:37,15:52:99:267,0,1413	0/1:16,8:24:99:122,0,624	0/1:11,4:15:99:106,0,390
chr10	110550435	.	T	TTTTTGC	36498.63	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-9.690;DP=770;FS=7.595;HRun=0;HaplotypeScore=143.5634;InbreedingCoeff=0.9851;MQ=71.45;MQ0=0;MQRankSum=-21.611;QD=93.59;ReadPosRankSum=-1.826;VQSLOD=6.2816;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,35:45:99:4540,123,0	0/0:9,0:9:27.09:0,27,659	0/0:18,0:18:34.69:0,35,713	0/0:19,0:18:36.07:0,36,643	1/1:0,19:23:60.21:2173,60,0	1/1:2,24:26:78.27:2873,78,0	1/1:6,17:27:72.25:2545,72,0	1/1:11,16:30:81.26:2752,81,0	1/1:5,26:33:87.30:3188,87,0	0/0:31,0:31:90.30:0,90,2170	0/0:25,0:25:75.23:0,75,1749	0/0:39,0:39:99:0,114,2699	0/0:35,0:35:99:0,99,2393	0/0:39,0:39:99:0,117,2782	0/0:30,0:30:90.30:0,90,2095	0/0:34,0:34:99:0,102,2439	1/1:4,19:24:66.23:2450,66,0	1/1:4,12:18:47.65:1592,48,0	1/1:5,9:18:48.16:1485,48,0	1/1:3,21:25:69.24:2545,69,0	1/1:4,15:25:42.14:1519,42,0	0/0:30,0:30:90.31:0,90,2213	0/0:23,0:23:69.20:0,69,1575	0/0:48,0:48:99:0,144,3420	1/1:5,12:17:45.15:1597,45,0	1/1:5,28:33:22.44:3274,22,0	1/1:7,27:39:99:3740,102,0	1/1:0,2:6:6.02:225,6,0
chr10	110551223	.	T	TC	6377.80	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-14.020;DP=785;FS=2.752;HRun=4;HaplotypeScore=77.5915;InbreedingCoeff=0.9997;MQ=85.78;MQ0=0;MQRankSum=-1.882;QD=35.43;ReadPosRankSum=2.319;VQSLOD=5.3160;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1326	0/0:15,0:15:45.11:0,45,501	0/0:28,0:28:45.97:0,46,694	0/0:24,0:24:44.59:0,45,530	0/0:30,0:30:84.21:0,84,931	0/0:29,0:29:84.01:0,84,920	0/0:40,0:40:99:0,117,1307	0/0:39,0:39:99:0,102,1117	0/0:33,0:33:93.22:0,93,1025	0/0:39,0:39:99:0,108,1216	0/0:27,0:27:78.17:0,78,860	1/1:3,19:22:54.18:738,54,0	1/1:1,30:32:87.27:1171,87,0	1/1:1,27:28:72.24:985,72,0	1/1:1,33:34:93.31:1272,93,0	0/0:29,0:29:78.19:0,78,866	0/0:39,0:39:99:0,114,1257	0/0:24,0:24:69.16:0,69,768	0/0:21,0:21:54.15:0,54,611	0/0:22,0:22:66.16:0,66,728	0/0:38,0:38:99:0,102,1141	1/1:2,19:21:51.17:695,51,0	1/1:3,10:13:27.09:368,27,0	1/1:1,29:30:84.28:1149,84,0	0/0:24,0:24:72.21:0,72,817	0/0:28,0:28:75.20:0,75,840	0/0:26,0:26:75.21:0,75,850	0/0:10,0:10:30.09:0,30,339
chr10	110551673	.	TG	T	10506.49	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=13.167;DP=630;FS=13.910;HRun=2;HaplotypeScore=60.8093;InbreedingCoeff=0.9975;MQ=90.69;MQ0=0;MQRankSum=-9.139;QD=36.61;ReadPosRankSum=0.624;VQSLOD=4.0036;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,53:53:99:1984,153,0	0/0:8,0:8:18.02:0,18,270	0/0:17,0:17:48.14:0,48,673	0/0:31,0:31:83.80:0,84,1129	0/0:14,0:14:42.14:0,42,629	0/0:19,0:19:54.16:0,54,777	0/0:22,0:22:66.21:0,66,965	1/1:3,38:41:99:1480,114,0	1/1:0,16:16:42.14:545,42,0	0/0:14,0:14:42.14:0,42,627	0/0:10,0:10:30.10:0,30,450	0/0:26,0:26:78.26:0,78,1164	0/0:28,0:28:84.28:0,84,1245	0/0:19,0:19:54.18:0,54,809	0/0:36,0:36:99:0,108,1568	0/0:25,1:26:39.28:0,39,1037	1/1:1,25:26:66.21:856,66,0	1/1:0,25:25:75.24:971,75,0	1/1:0,15:15:45.15:583,45,0	1/1:0,16:16:45.15:584,45,0	1/1:0,44:44:99:1674,129,0	0/0:11,0:11:33.11:0,33,495	0/0:13,0:13:39.13:0,39,584	0/0:25,0:25:75.25:0,75,1115	0/0:24,0:24:69.20:0,69,991	1/1:0,21:21:63.20:817,63,0	1/1:0,24:24:60.20:779,60,0	1/1:0,6:6:18.06:233,18,0
chr10	110552040	.	CA	C	14060.50	PASS	AB=0.920;AC=45;AF=0.804;AN=56;BaseQRankSum=7.989;DP=695;FS=2.348;HRun=8;HaplotypeScore=70.8812;InbreedingCoeff=0.8364;MQ=85.00;MQ0=0;MQRankSum=-3.653;QD=24.04;ReadPosRankSum=4.652;VQSLOD=5.4785;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,38:41:99:1043,108,0	0/0:9,1:10:1.11:0,1,297	0/0:20,0:20:33.08:0,33,380	0/1:21,2:23:14.84:15,0,365	1/1:2,23:25:63.09:608,63,0	1/1:2,23:25:66.10:637,66,0	1/1:4,27:31:78.12:753,78,0	1/1:6,27:33:78.12:753,78,0	1/1:0,15:15:39.06:377,39,0	0/0:33,0:33:72.22:0,72,868	0/0:21,0:21:54.15:0,54,631	1/1:0,19:19:57.09:550,57,0	1/1:3,31:34:90.14:869,90,0	1/1:1,24:25:66.10:637,66,0	1/1:4,30:34:87.13:840,87,0	0/0:26,0:26:72.21:0,72,858	1/1:1,20:21:60.10:579,60,0	1/1:1,21:22:54.09:522,54,0	1/1:5,16:21:48.06:458,48,0	1/1:1,25:26:72.11:695,72,0	1/1:2,35:37:96.15:927,96,0	1/1:0,27:27:78.12:753,78,0	1/1:2,16:18:36.04:348,36,0	1/1:1,31:32:81.13:782,81,0	1/1:2,17:19:51.08:492,51,0	1/1:3,25:28:69.10:666,69,0	1/1:3,13:16:39.06:377,39,0	1/1:0,13:13:39.06:377,39,0
chr10	110552199	.	T	TA	2677.06	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-7.340;DP=685;FS=13.220;HRun=11;HaplotypeScore=87.1695;InbreedingCoeff=0.9699;MQ=74.11;MQ0=4;MQRankSum=-0.101;QD=16.53;ReadPosRankSum=2.591;VQSLOD=3.4270;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:34:54.24:0,54,571	0/0:11,0:11:23.90:0,24,186	0/0:43,1:29:34.20:0,34,265	0/0:28,0:23:21.37:0,21,183	0/0:21,0:22:55.81:0,56,423	0/0:36,0:38:85.65:0,86,656	0/0:22,0:22:62.74:0,63,484	0/0:32,0:32:28.28:0,28,325	0/0:15,0:17:45.89:0,46,333	0/0:32,0:32:77.64:0,78,601	0/0:21,0:22:24.91:0,25,347	1/1:3,15:18:16.22:343,16,0	1/1:8,18:26:50.64:479,51,0	1/1:3,14:18:7.03:251,7,0	1/1:7,29:36:26.23:624,26,0	0/0:23,0:24:49.82:0,50,374	0/0:17,0:18:46.64:0,47,354	0/0:17,0:17:38.83:0,39,302	0/0:28,0:28:51.32:0,51,365	0/0:27,0:27:65.70:0,66,507	0/0:16,0:15:29.84:0,30,228	1/1:3,12:15:9.83:280,10,0	1/1:8,18:27:31.22:479,31,0	1/1:5,16:22:38.21:412,38,0	0/0:18,0:18:47.78:0,48,367	0/0:35,0:34:66.14:0,66,508	0/0:25,0:27:48.80:0,49,353	0/0:8,0:8:20.90:0,21,162
chr10	110552847	.	TTG	T	3598.75	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-5.628;DP=618;FS=12.541;HRun=0;HaplotypeScore=119.7023;InbreedingCoeff=0.9829;MQ=64.85;MQ0=5;MQRankSum=-1.828;QD=23.52;ReadPosRankSum=-2.741;VQSLOD=3.0797;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:66.71:0,67,235	0/0:8,0:8:14.92:0,15,307	0/0:17,0:9:11.82:0,12,98	0/0:12,0:8:14.89:0,15,109	0/0:29,0:29:87.17:0,87,1073	0/0:17,0:17:51.04:0,51,614	0/0:31,0:31:90.23:0,90,1209	0/0:32,0:32:51.09:0,51,406	0/0:11,0:11:17.37:0,17,50	0/0:20,0:19:44.63:0,45,557	0/0:27,0:27:60.66:0,61,716	1/1:15,3:17:39.08:439,39,0	1/1:6,16:22:33.06:426,33,0	1/1:15,1:16:44.16:416,44,0	1/1:16,8:24:69.03:771,69,0	0/0:7,0:7:19.87:0,20,199	0/0:22,0:22:28.40:0,28,100	0/0:34,0:34:48.01:0,48,200	0/0:28,0:26:66.93:0,67,428	0/0:25,0:25:53.87:0,54,257	0/0:24,0:24:30.87:0,31,132	1/1:4,20:23:56.70:600,57,0	1/1:3,23:26:23:474,23,0	1/1:4,19:23:38.70:473,39,0	0/0:19,0:19:57.12:0,57,714	0/0:23,0:23:61.16:0,61,380	0/0:25,0:25:39.53:0,40,152	0/0:7,0:7:16.89:0,17,77
chr10	110552848	.	TG	T	2726.07	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-3.969;DP=624;FS=13.059;HRun=1;HaplotypeScore=113.2992;InbreedingCoeff=0.9740;MQ=64.93;MQ0=5;MQRankSum=0.277;QD=17.59;ReadPosRankSum=-3.001;VQSLOD=2.1932;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:71.16:0,71,391	0/0:8,0:8:16.74:0,17,230	0/0:16,0:9:12.19:0,12,89	0/0:11,1:8:12.92:0,13,69	0/0:30,0:30:90.08:0,90,894	0/0:17,0:17:51.02:0,51,501	0/0:30,0:30:90.19:0,90,954	0/0:32,0:32:59.69:0,60,481	0/0:11,0:11:25.61:0,26,109	0/0:20,0:19:40.36:0,40,450	0/0:28,0:28:52.01:0,52,600	1/1:17,2:18:51.12:418,51,0	1/1:19,3:22:32.97:285,33,0	1/1:16,1:17:47.87:415,48,0	1/1:22,2:24:70.43:590,70,0	0/0:7,0:7:8.22:0,8,137	0/0:23,0:23:35.76:0,36,170	0/0:34,0:34:58.47:0,58,304	0/0:30,0:28:72.50:0,72,517	0/0:26,0:26:66.57:0,67,364	0/0:24,0:24:36.79:0,37,195	1/1:21,3:23:56.67:460,57,0	1/1:25,1:26:23.19:345,23,0	1/1:19,4:23:39.07:412,39,0	0/0:19,0:19:57.07:0,57,577	0/0:23,0:23:66.89:0,67,453	0/0:25,0:25:50.36:0,50,245	0/0:7,0:7:19.69:0,20,106
chr10	110552849	.	GTTTT	G	7422.87	PASS	AB=0.830;AC=25;AF=0.446;AN=56;BaseQRankSum=-9.914;DP=623;FS=31.299;HRun=13;HaplotypeScore=127.4505;InbreedingCoeff=0.6238;MQ=65.66;MQ0=5;MQRankSum=3.543;QD=21.21;ReadPosRankSum=2.865;VQSLOD=1.2772;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,43:48:54.84:1237,55,0	0/0:7,0:8:24.08:0,24,524	0/1:14,0:9:2.26:2,0,137	0/0:11,0:9:16.24:0,16,111	0/1:29,0:29:52.48:52,0,787	0/1:17,0:17:46.69:47,0,483	0/0:30,0:30:9.62:0,10,1048	1/1:9,23:32:42.27:671,42,0	1/1:0,11:11:30.10:438,30,0	0/0:17,0:19:51.14:0,51,841	0/0:25,0:28:63.09:0,63,1004	0/0:19,0:18:25.51:0,26,492	0/0:21,0:22:29.58:0,30,212	0/0:16,0:16:39.91:0,40,463	0/0:24,0:24:44.54:0,45,611	0/1:4,1:7:25.82:26,0,273	1/1:1,21:23:34.35:486,34,0	1/1:4,29:33:57.08:808,57,0	1/1:7,23:28:66.49:762,66,0	1/1:3,22:25:59.96:819,60,0	1/1:2,22:24:33.10:483,33,0	0/0:24,0:23:24.49:0,24,374	0/0:26,0:26:38.89:0,39,326	0/0:23,0:23:39.05:0,39,420	0/0:20,0:20:1.37:0,1,603	0/1:5,18:23:84.41:674,0,84	1/1:2,23:25:46.81:699,47,0	1/1:2,5:7:15.02:219,15,0
chr10	110554350	.	G	GACACAC	1772.05	PASS	AB=0.971;AC=20;AF=0.370;AN=54;BaseQRankSum=2.439;DP=611;FS=25.210;HRun=0;HaplotypeScore=176.8444;InbreedingCoeff=0.2206;MQ=56.51;MQ0=8;MQRankSum=-4.622;QD=5.81;ReadPosRankSum=-5.043;VQSLOD=-0.5211;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:3.79:0,4,121	0/0:5,0:5:8.82:0,9,135	1/1:28,0:14:0.89:2,1,0	0/0:42,0:17:3.01:0,3,35	0/0:23,0:23:29.81:0,30,483	0/1:19,0:18:18.55:19,0,45	0/0:22,0:21:26.11:0,26,436	0/1:27,0:26:35.13:35,0,165	0/0:27,0:27:18.01:0,18,166	0/0:22,0:22:33.04:0,33,508	0/0:9,0:9:11.40:0,11,191	0/1:14,5:19:33.66:329,0,34	1/1:22,1:24:23.86:526,24,0	1/1:17,3:20:11.31:164,11,0	1/1:30,4:35:20.96:492,21,0	0/0:27,0:33:48.15:0,48,887	1/1:14,0:14:6.42:64,6,0	0/1:17,0:17:43.17:70,0,43	0/1:13,0:13:2.86:3,0,70	0/1:18,0:18:43.61:44,0,67	0/0:23,0:22:11.97:0,12,132	0/0:14,8:21:0.47:0,0,1	1/1:9,0:8:5.95:54,6,0	./.	0/0:23,0:22:24.08:0,24,423	0/1:35,0:34:85.58:86,0,455	0/1:26,0:25:53.27:53,0,132	0/0:6,0:6:6.01:0,6,81
chr10	110554378	.	C	CAGAGAGAG	1541.53	PASS	AB=0.977;AC=17;AF=0.304;AN=56;BaseQRankSum=5.589;DP=579;FS=15.209;HRun=0;HaplotypeScore=162.8840;InbreedingCoeff=-0.3061;MQ=47.54;MQ0=12;MQRankSum=-2.504;QD=4.60;ReadPosRankSum=-2.208;VQSLOD=1.6152;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:17.44:0,17,408	0/0:6,0:6:12.04:0,12,296	0/0:15,0:10:19.28:0,19,406	0/0:27,0:7:11.15:0,11,233	1/1:18,2:20:5.66:142,6,0	0/1:12,10:23:39.08:200,0,39	0/1:24,0:22:32.81:170,0,33	0/1:22,0:21:99:115,0,784	0/0:30,0:29:21.03:0,21,483	0/0:23,0:23:69.21:0,69,1621	0/0:10,0:10:30.10:0,30,840	0/0:18,0:25:3.20:0,3,165	0/1:20,0:19:93.87:94,0,183	0/1:23,0:22:3.05:3,0,166	0/1:28,0:28:38.67:39,0,303	0/0:37,0:37:82.02:0,82,2130	0/1:12,0:12:36.98:73,0,37	0/1:16,0:15:45.25:45,0,451	0/1:15,0:13:99:268,0,260	0/1:27,0:27:86.62:87,0,472	0/0:20,0:19:15.03:0,15,311	0/1:18,0:17:38.45:42,0,38	0/0:9,0:8:2.05:0,2,70	0/0:14,0:13:0:0,0,0	0/1:20,0:19:19.65:20,0,32	0/1:28,0:27:99:324,0,1212	0/1:31,0:29:54.07:54,0,786	0/1:6,0:5:19.90:20,0,169
chr10	110554382	.	C	CAGAGAGAGAGAG	5189.47	PASS	AB=0.934;AC=42;AF=0.750;AN=56;BaseQRankSum=1.814;DP=635;FS=12.531;HRun=0;HaplotypeScore=210.3959;InbreedingCoeff=0.3839;MQ=47.65;MQ0=13;MQRankSum=-3.921;QD=9.85;ReadPosRankSum=-2.053;VQSLOD=2.1426;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,7:28:4.83:112,5,0	0/0:6,0:6:3.10:0,3,139	0/1:13,0:9:8.55:9,0,441	0/1:30,0:9:11.53:12,0,213	1/1:20,0:20:10.52:129,11,0	1/1:26,0:24:8.36:210,8,0	1/1:28,0:26:16.09:258,16,0	1/1:25,0:24:16.30:456,16,0	0/0:24,6:32:0.05:0,0,0	0/0:22,0:22:28.22:0,28,729	0/0:12,0:12:10.68:0,11,696	1/1:29,0:28:5.74:69,6,0	1/1:19,0:23:12.51:424,13,0	1/1:17,0:26:3.01:54,3,0	1/1:25,0:32:5.74:125,6,0	0/0:35,0:35:54.10:0,54,1543	1/1:7,5:14:7.12:214,7,0	1/1:13,2:20:10.39:460,10,0	1/1:15,0:13:17.96:415,18,0	1/1:29,0:29:6.02:205,6,0	1/1:23,0:22:2.59:42,3,0	1/1:19,0:17:6.02:146,6,0	0/1:12,0:11:0:0,0,0	1/1:15,0:14:6.02:95,6,0	1/1:18,0:17:4.83:47,5,0	1/1:25,4:32:36.10:1291,36,0	0/1:23,0:34:23.85:347,0,24	1/1:7,0:6:3.01:68,3,0
chr10	110554711	.	TAGAGGC	T	3463.43	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.723;DP=560;FS=2.468;HRun=0;HaplotypeScore=119.0692;InbreedingCoeff=0.9655;MQ=60.83;MQ0=0;MQRankSum=-10.280;QD=34.63;ReadPosRankSum=3.511;VQSLOD=3.2911;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.21:0,66,1841	0/0:9,0:9:24.08:0,24,801	0/0:26,0:22:51.15:0,51,1466	0/0:27,0:24:47.37:0,47,1298	0/0:26,0:26:42.14:0,42,1275	0/0:18,0:18:39.12:0,39,1194	0/0:19,0:19:45.15:0,45,1401	0/0:25,0:24:66.23:0,66,2193	0/0:20,0:20:51.18:0,51,1668	0/0:22,0:22:39.13:0,39,1266	0/0:13,0:13:24.08:0,24,803	1/1:11,10:21:42.08:787,42,0	1/1:6,12:18:45.13:896,45,0	1/1:5,10:15:33.10:677,33,0	1/1:5,10:15:27.09:586,27,0	0/0:35,0:35:93.32:0,93,3038	0/0:16,0:16:45.15:0,45,1446	0/0:28,0:28:69.22:0,69,2234	0/0:19,0:19:33.11:0,33,1106	0/0:23,0:23:42.13:0,42,1270	0/0:29,0:29:81.28:0,81,2660	1/1:5,2:7:9.02:156,9,0	1/1:8,7:15:8.71:166,9,0	1/1:4,5:9:8.87:195,9,0	0/0:17,0:17:42.14:0,42,1407	0/0:24,0:24:51.17:0,51,1717	0/0:24,0:23:60.21:0,60,1941	0/0:15,0:15:39.09:0,39,1211
chr10	110554835	.	AT	A	5373.01	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=2.634;DP=673;FS=0.342;HRun=1;HaplotypeScore=85.3079;InbreedingCoeff=0.9998;MQ=70.17;MQ0=0;MQRankSum=-1.672;QD=32.37;ReadPosRankSum=0.586;VQSLOD=4.5022;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:73.67:0,74,1178	0/0:13,0:13:39.08:0,39,509	0/0:17,0:17:37.69:0,38,479	0/0:18,0:18:47.72:0,48,644	0/0:41,0:41:99:0,120,1597	0/0:28,0:27:84.26:0,84,1121	0/0:10,0:10:30.09:0,30,386	0/0:30,0:29:90.13:0,90,1117	0/0:20,0:20:60.20:0,60,813	0/0:35,0:35:99:0,105,1376	0/0:19,0:19:54.15:0,54,703	1/1:2,21:23:69.08:857,69,0	1/1:1,33:34:78.71:1191,79,0	1/1:6,15:21:52.71:721,53,0	1/1:7,22:29:78.04:1019,78,0	0/0:28,0:28:84.23:0,84,1080	0/0:29,0:29:87.13:0,87,1105	0/0:18,0:18:54.09:0,54,658	0/0:15,0:15:45.11:0,45,554	0/0:24,0:24:69.18:0,69,901	0/0:22,0:22:66.12:0,66,854	1/1:1,17:18:42.07:534,42,0	1/1:1,16:17:36.12:500,36,0	1/1:2,22:24:44.94:552,45,0	0/0:30,0:30:87.19:0,87,1089	0/0:23,0:23:69.18:0,69,864	0/0:38,0:36:99:0,110,1431	0/0:16,0:16:48.12:0,48,613
chr10	110554961	.	G	GACAT	30913.63	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=7.834;DP=689;FS=8.043;HRun=0;HaplotypeScore=137.4342;InbreedingCoeff=0.9981;MQ=91.32;MQ0=0;MQRankSum=-10.148;QD=57.04;ReadPosRankSum=4.635;VQSLOD=6.1287;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,33:42:87.30:2197,87,0	0/0:7,0:7:18.06:0,18,315	0/0:28,0:29:84.28:0,84,1466	0/0:37,0:37:83.28:0,83,1386	1/1:3,16:19:36.12:938,36,0	1/1:7,17:24:51.18:1328,51,0	1/1:11,18:29:60.19:1470,60,0	1/1:20,17:37:81.28:1913,81,0	1/1:7,13:21:51.16:1273,51,0	0/0:20,0:20:53.85:0,54,964	0/0:15,0:15:45.15:0,45,826	1/1:3,18:22:51.18:1328,51,0	1/1:4,26:31:81.28:2101,81,0	1/1:2,17:19:51.18:1325,51,0	1/1:7,21:30:60.17:1562,60,0	0/0:39,0:39:99:0,111,2011	1/1:3,18:21:54.19:1410,54,0	1/1:2,16:18:36.12:939,36,0	1/1:11,14:26:63.20:1551,63,0	1/1:6,14:20:51.16:1260,51,0	1/1:5,33:39:84.28:2156,84,0	1/1:10,14:25:48.16:1191,48,0	1/1:3,9:12:27.09:686,27,0	1/1:3,18:23:45.15:1174,45,0	1/1:4,14:18:36.12:937,36,0	1/1:2,21:24:66.23:1673,66,0	1/1:4,19:23:57.20:1485,57,0	1/1:2,16:18:39.13:1014,39,0
chr10	110554966	.	A	AC	3727.74	PASS	AB=0.987;AC=32;AF=0.571;AN=56;BaseQRankSum=17.505;DP=644;FS=13.590;HRun=0;HaplotypeScore=185.4056;InbreedingCoeff=0.1007;MQ=92.81;MQ0=0;MQRankSum=-9.248;QD=7.44;ReadPosRankSum=10.584;VQSLOD=1.4756;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:0.22:369,0,0	0/0:6,0:6:18.06:0,18,251	0/0:30,0:30:87.27:0,87,1154	0/0:34,0:34:89.77:0,90,1186	0/1:18,0:18:49.76:90,0,50	0/1:22,0:22:13.69:130,0,14	0/1:23,1:24:19.06:237,0,19	0/1:31,1:32:99:144,0,412	1/1:18,1:19:43.16:190,43,0	0/0:20,0:20:54.18:0,54,756	0/0:15,0:15:45.15:0,45,629	1/1:20,0:20:9.92:154,10,0	1/1:31,0:31:25.98:247,26,0	1/1:19,0:19:26.59:167,27,0	0/1:30,0:30:99:159,0,160	0/0:38,0:38:99:0,111,1552	1/1:21,0:21:12.57:161,13,0	1/1:15,0:15:32.41:134,32,0	0/1:23,0:22:87.27:87,0,230	0/1:19,1:20:7.43:202,0,7	0/1:37,0:37:55:232,0,55	0/1:22,1:23:6.13:172,0,6	1/1:12,0:12:8.10:113,8,0	0/1:22,0:22:28.46:121,0,28	0/1:18,0:18:22.71:98,0,23	1/1:22,0:22:37.75:224,38,0	0/1:23,0:22:24.17:142,0,24	1/1:14,0:14:35.66:155,36,0
chr10	110555846	.	CA	C	12547.82	PASS	AB=0.567;AC=43;AF=0.768;AN=56;BaseQRankSum=5.496;DP=653;FS=2.386;HRun=8;HaplotypeScore=71.9188;InbreedingCoeff=0.8991;MQ=81.22;MQ0=0;MQRankSum=-4.856;QD=23.81;ReadPosRankSum=2.257;VQSLOD=5.7951;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,45:50:99:1093,114,0	0/0:8,0:8:24.07:0,24,290	0/0:15,0:15:26.94:0,27,276	0/0:24,0:25:46.13:0,46,487	1/1:3,21:24:57.09:550,57,0	1/1:0,20:20:51.08:492,51,0	1/1:3,19:22:48.07:464,48,0	1/1:9,30:39:90.13:869,90,0	1/1:6,20:26:60.09:579,60,0	0/0:21,0:21:51.15:0,51,602	0/0:28,0:28:63.19:0,63,761	1/1:1,18:19:51.08:492,51,0	1/1:1,19:20:48.08:463,48,0	1/1:2,18:20:45.06:434,45,0	1/1:4,23:27:57.09:550,57,0	0/0:29,0:29:78.24:0,78,942	1/1:2,35:37:96.15:927,96,0	1/1:0,13:13:39.06:377,39,0	1/1:3,14:17:42.05:400,42,0	1/1:3,32:35:87.13:840,87,0	1/1:0,28:28:78.12:753,78,0	1/1:0,22:23:68.14:643,68,0	1/1:1,27:28:78.12:753,78,0	1/1:1,18:19:48.08:464,48,0	1/1:0,12:12:36.06:348,36,0	0/1:4,13:17:27.41:332,0,27	1/1:0,22:22:48.08:464,48,0	1/1:0,9:9:27.04:261,27,0
chr10	110556238	.	TA	T	8099.41	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=12.420;DP=632;FS=0.655;HRun=10;HaplotypeScore=63.8558;InbreedingCoeff=0.9905;MQ=76.69;MQ0=1;MQRankSum=-2.600;QD=21.77;ReadPosRankSum=1.764;VQSLOD=5.8041;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:33:80.98:703,81,0	0/0:13,0:13:36.08:0,36,389	0/0:20,0:19:41.65:0,42,432	0/0:22,0:21:21.32:0,21,281	1/1:3,15:18:44.94:383,45,0	1/1:2,26:28:74.97:651,75,0	1/1:1,18:19:47.99:417,48,0	1/1:8,25:33:74.76:645,75,0	1/1:1,20:21:53.99:469,54,0	0/0:27,0:27:75.20:0,75,825	0/0:19,0:19:51.14:0,51,564	0/0:22,1:23:34.07:0,34,580	0/0:19,0:19:54.13:0,54,587	0/0:15,0:15:42.11:0,42,465	0/0:29,0:29:78.20:0,78,856	0/0:18,0:18:48.11:0,48,515	1/1:0,20:20:53.99:469,54,0	1/1:3,17:20:47.93:416,48,0	1/1:1,15:16:44.89:368,45,0	1/1:5,22:27:62.91:534,63,0	1/1:0,19:20:59.03:501,59,0	0/0:18,0:18:50.90:0,51,516	0/0:24,1:25:8.52:0,9,530	0/0:12,0:12:33.08:0,33,357	1/1:3,28:31:80.98:703,81,0	1/1:2,24:26:38.80:566,39,0	1/1:2,36:38:98.98:859,99,0	1/1:4,18:21:47.98:417,48,0
chr10	110556538	.	TA	T	5822.79	PASS	AB=0.800;AC=30;AF=0.536;AN=56;BaseQRankSum=4.575;DP=548;FS=4.130;HRun=11;HaplotypeScore=137.4099;InbreedingCoeff=0.8626;MQ=59.32;MQ0=0;MQRankSum=-7.198;QD=18.49;ReadPosRankSum=0.582;VQSLOD=3.9403;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:20:47.65:376,48,0	0/0:13,0:13:36.09:0,36,384	0/0:13,0:12:7.30:0,7,117	0/1:8,0:7:3.77:4,0,31	1/1:5,19:24:59.87:488,60,0	1/1:8,15:23:49.45:395,49,0	1/1:2,12:14:38.95:320,39,0	1/1:8,18:27:62.83:507,63,0	1/1:6,14:20:12.97:312,13,0	0/0:23,1:24:38.49:0,38,605	0/0:21,1:22:32.97:0,33,551	0/0:17,0:17:42.09:0,42,437	0/0:20,0:20:42.08:0,42,435	0/0:15,0:15:38.89:0,39,409	0/0:32,0:32:81.20:0,81,856	0/0:26,0:26:63.16:0,63,672	1/1:4,11:14:26.93:222,27,0	1/1:3,9:12:29.95:246,30,0	1/1:5,21:26:59.90:493,60,0	0/1:8,16:24:13:316,0,13	1/1:0,5:5:14.98:122,15,0	0/0:14,1:15:17.40:0,17,360	0/0:21,0:21:54.10:0,54,558	0/0:14,0:14:36.09:0,36,384	1/1:2,14:16:44.45:354,44,0	1/1:2,32:33:91.86:734,92,0	1/1:7,20:26:62.90:516,63,0	1/1:3,17:20:50.92:419,51,0
chr10	110556564	.	A	AGTCTTT	42305.68	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-1.217;DP=593;FS=2.281;HRun=0;HaplotypeScore=130.8614;InbreedingCoeff=0.9978;MQ=62.25;MQ0=0;MQRankSum=-15.265;QD=88.32;ReadPosRankSum=-0.692;VQSLOD=6.4132;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,20:30:66.23:2124,66,0	0/0:7,0:7:21.07:0,21,505	0/0:16,0:14:39.13:0,39,880	0/0:11,0:11:30.10:0,30,692	1/1:7,22:30:81.20:2412,81,0	1/1:3,15:18:48.16:1666,48,0	1/1:3,12:16:45.15:1567,45,0	1/1:13,21:37:99:3363,108,0	1/1:6,13:20:57.20:2018,57,0	0/0:33,0:33:99:0,99,2340	0/0:23,0:23:66.22:0,66,1541	1/1:3,19:22:66.23:2219,66,0	1/1:7,17:26:69.24:2287,69,0	1/1:2,13:17:44.94:1581,45,0	1/1:6,24:32:90.31:3111,90,0	0/0:24,0:24:69.24:0,69,1639	1/1:0,11:11:21.07:712,21,0	1/1:3,7:10:30.10:1003,30,0	1/1:11,8:23:66.21:2041,66,0	1/1:8,21:29:84.29:2655,84,0	1/1:3,8:11:27.09:784,27,0	1/1:5,9:18:42.10:1224,42,0	1/1:0,13:16:42.10:1409,42,0	1/1:6,8:15:36.06:1193,36,0	1/1:5,12:18:42.14:1408,42,0	1/1:12,25:36:36.22:3617,36,0	1/1:3,23:26:75.26:2616,75,0	1/1:4,12:16:36.12:1295,36,0
chr10	110557896	.	C	CTGAG	15043.19	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-12.659;DP=793;FS=1.735;HRun=0;HaplotypeScore=130.1670;InbreedingCoeff=0.9998;MQ=86.64;MQ0=0;MQRankSum=-4.904;QD=59.23;ReadPosRankSum=3.295;VQSLOD=6.7287;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,147,2664	0/0:10,0:10:30.10:0,30,551	0/0:28,0:28:81.09:0,81,1367	0/0:29,0:29:50.56:0,51,1004	0/0:26,0:26:75.26:0,75,1371	0/0:23,0:22:69.24:0,69,1260	0/0:30,0:30:78.27:0,78,1435	0/0:33,0:33:84.27:0,84,1502	0/0:22,0:22:63.22:0,63,1159	0/0:25,0:25:66.23:0,66,1211	0/0:14,0:14:36.12:0,36,663	1/1:8,32:41:87.30:2270,87,0	1/1:5,39:45:99:3312,126,0	1/1:3,40:45:99:2841,108,0	1/1:12,37:50:99:2842,108,0	0/0:30,0:29:90.31:0,90,1648	0/0:33,0:33:99:0,99,1822	0/0:17,0:17:42.12:0,42,737	0/0:15,0:15:33.11:0,33,607	0/0:21,0:21:60.21:0,60,1097	0/0:44,0:44:99:0,120,2176	1/1:1,18:19:42.14:1106,42,0	1/1:6,18:24:51.18:1345,51,0	1/1:3,24:30:51.18:1327,51,0	0/0:29,0:29:81.26:0,81,1452	0/0:25,0:25:72.25:0,72,1325	0/0:20,0:20:54.19:0,54,986	0/0:12,0:12:36.12:0,36,662
chr10	110558177	.	AT	A	13967.34	PASS	AB=0.518;AC=29;AF=0.518;AN=56;BaseQRankSum=12.179;DP=756;FS=3.441;HRun=2;HaplotypeScore=76.1734;InbreedingCoeff=0.9358;MQ=91.72;MQ0=0;MQRankSum=-5.087;QD=34.66;ReadPosRankSum=1.506;VQSLOD=5.3011;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,46:46:99:1558,120,0	0/0:8,0:8:24.07:0,24,335	0/0:31,0:31:82.34:0,82,1212	0/0:34,0:33:89.77:0,90,1176	1/1:1,25:26:72.23:935,72,0	1/1:0,27:27:81.26:1051,81,0	1/1:0,31:31:81.26:1052,81,0	1/1:1,30:31:87.27:1115,87,0	1/1:0,30:30:75.24:974,75,0	0/0:26,0:26:78.25:0,78,1119	0/0:16,0:16:48.14:0,48,680	0/0:23,0:23:69.23:0,69,1034	0/0:40,0:40:99:0,117,1707	0/0:34,0:34:99:0,99,1462	0/0:48,0:48:99:0,144,2099	0/0:35,0:35:99:0,105,1534	1/1:0,25:25:60.20:779,60,0	1/1:0,25:25:66.21:857,66,0	1/1:0,16:16:45.15:584,45,0	1/1:0,27:27:69.06:871,69,0	1/1:0,31:31:90.29:1168,90,0	0/0:15,0:15:45.15:0,45,674	0/0:14,0:14:42.09:0,42,584	0/0:27,2:29:9.35:0,9,1110	1/1:0,19:19:48.16:623,48,0	0/1:2,27:29:5.68:926,0,6	1/1:1,29:30:84.26:1085,84,0	1/1:0,10:10:30.10:389,30,0
chr10	110558575	.	C	CA	3566.88	PASS	AB=0.848;AC=24;AF=0.429;AN=56;BaseQRankSum=-4.830;DP=674;FS=1.805;HRun=12;HaplotypeScore=98.2694;InbreedingCoeff=0.5072;MQ=58.03;MQ0=15;MQRankSum=0.956;QD=8.94;ReadPosRankSum=-2.319;VQSLOD=2.5628;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:39:29.13:152,29,0	0/0:9,0:9:10.95:0,11,84	0/1:35,0:11:28.88:29,0,44	0/1:23,0:8:15.03:17,0,15	0/0:11,0:25:32.59:0,33,113	0/0:8,0:20:23.34:0,23,80	0/0:7,0:15:20.20:0,20,85	1/1:16,18:33:30.68:384,31,0	1/1:7,14:21:8.12:232,8,0	0/0:28,0:28:31.71:0,32,260	0/1:24,2:26:7.74:8,0,272	0/0:22,0:22:4.58:0,5,178	0/0:21,0:22:15.02:0,15,224	0/0:28,0:27:27.32:0,27,346	0/0:27,0:26:3.62:0,4,204	0/1:17,1:18:19.10:19,0,195	1/1:22,13:36:52.70:606,53,0	0/1:6,13:20:9.18:225,0,9	1/1:13,17:26:51.04:472,51,0	1/1:13,8:21:33.05:320,33,0	1/1:12,9:20:12.05:259,12,0	0/0:12,0:12:23.83:0,24,171	0/0:20,0:21:40.76:0,41,287	0/0:22,0:22:32.78:0,33,240	0/0:10,0:22:18.22:0,18,53	1/1:11,21:33:62.90:583,63,0	0/1:8,12:20:6.88:93,0,7	1/1:11,8:17:2.44:168,2,0
chr10	110559827	.	G	GCCCC	5259.52	PASS	AB=0.964;AC=23;AF=0.411;AN=56;BaseQRankSum=18.998;DP=632;FS=8.026;HRun=0;HaplotypeScore=171.7873;InbreedingCoeff=-0.5371;MQ=90.85;MQ0=0;MQRankSum=-8.753;QD=11.24;ReadPosRankSum=11.021;VQSLOD=1.6093;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:51.41:169,0,51	0/0:9,0:9:27.09:0,27,542	0/0:20,0:20:60.18:0,60,1176	0/0:36,0:36:99:0,108,1878	0/1:21,0:21:99:137,0,143	0/1:21,0:21:11:234,0,11	0/1:18,1:19:71.55:360,0,72	0/1:24,0:24:99:152,0,310	0/1:26,1:27:51.02:429,0,51	0/0:33,0:33:87.29:0,87,1781	0/0:33,0:33:81.25:0,81,1573	0/1:17,2:19:99:286,0,148	0/1:28,1:29:99:441,0,100	0/1:20,2:22:15.19:388,0,15	0/1:36,0:36:99:420,0,208	0/0:33,0:33:99:0,99,1986	0/1:27,0:27:99:291,0,117	0/1:20,0:20:59.36:243,0,59	0/1:13,1:14:96.51:97,0,144	0/1:16,0:16:73.72:74,0,80	0/1:26,1:27:10.35:318,0,10	0/1:14,2:16:47.90:159,0,48	0/1:13,2:15:96.70:97,0,98	0/1:18,0:18:55.19:177,0,55	0/1:13,2:15:23.48:195,0,23	0/1:26,0:26:99:153,0,106	0/1:25,0:25:48.47:324,0,48	1/1:5,0:5:11.96:115,12,0
chr10	110559828	.	A	ACCCAG	27775.40	PASS	AB=0.711;AC=43;AF=0.768;AN=56;BaseQRankSum=-12.086;DP=713;FS=4.478;HRun=0;HaplotypeScore=138.2972;InbreedingCoeff=0.8917;MQ=88.85;MQ0=0;MQRankSum=-8.325;QD=50.96;ReadPosRankSum=3.498;VQSLOD=5.2074;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,12:32:39.13:1154,39,0	0/0:9,0:9:24.08:0,24,487	0/0:22,0:22:54.18:0,54,1060	0/0:37,0:37:88.22:0,88,1619	1/1:8,14:22:30.06:837,30,0	1/1:15,11:26:42.14:1213,42,0	1/1:9,13:24:60.21:1797,60,0	1/1:13,12:29:45.13:1171,45,0	1/1:4,22:28:66.23:1998,66,0	0/0:33,0:33:87.29:0,87,1704	0/0:34,0:34:72.25:0,72,1457	1/1:7,11:22:48.16:1429,48,0	1/1:9,21:34:69.24:2071,69,0	1/1:2,17:24:54.19:1625,54,0	1/1:10,27:41:78.27:2362,78,0	0/0:33,0:33:93.30:0,93,1845	1/1:8,19:27:57.03:1728,57,0	1/1:5,16:22:48.16:1445,48,0	1/1:14,5:23:45.08:973,45,0	1/1:11,7:23:15.05:454,15,0	1/1:8,19:33:54.19:1555,54,0	1/1:13,4:20:21.07:571,21,0	1/1:8,7:18:17.87:545,18,0	1/1:3,15:18:33.11:1000,33,0	1/1:10,6:21:28.34:794,28,0	0/1:16,11:27:14.50:1165,0,15	1/1:5,20:26:51.06:1541,51,0	1/1:0,5:5:12.04:346,12,0
chr10	110564194	.	T	TA	4570.18	PASS	AB=0.882;AC=31;AF=0.554;AN=56;BaseQRankSum=-5.565;DP=519;FS=8.372;HRun=12;HaplotypeScore=50.7573;InbreedingCoeff=0.7792;MQ=61.95;MQ0=8;MQRankSum=-1.193;QD=14.37;ReadPosRankSum=-0.391;VQSLOD=4.7496;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,19:25:38.90:364,39,0	0/0:3,0:3:5.96:0,6,44	0/0:10,0:5:2.59:0,3,10	0/0:12,0:7:2.67:0,3,22	1/1:5,14:21:6.76:335,7,0	1/1:4,18:22:16.99:313,17,0	1/1:3,12:15:5.14:212,5,0	1/1:11,9:20:24.01:222,24,0	1/1:3,13:15:8.14:241,8,0	0/0:25,0:26:67.62:0,68,486	0/0:15,0:16:37.81:0,38,267	0/0:23,0:23:44.57:0,45,326	0/0:18,0:19:38.58:0,39,282	0/1:13,2:15:31.02:31,0,126	0/0:22,0:22:50.64:0,51,370	0/0:20,0:21:20.60:0,21,303	1/1:5,27:32:44.21:591,44,0	1/1:3,14:16:30.02:284,30,0	1/1:6,10:18:35.62:290,36,0	1/1:6,9:17:32.57:258,33,0	1/1:2,2:4:8.85:72,9,0	0/0:15,0:15:23.76:0,24,169	0/0:14,0:14:26.81:0,27,197	0/0:16,1:18:8.65:0,9,217	1/1:3,17:20:38.90:365,39,0	1/1:15,14:27:4.97:341,5,0	1/1:7,24:32:59.92:564,60,0	1/1:5,5:9:9.01:88,9,0
chr10	110566901	.	CT	C	1973.18	PASS	AB=0.873;AC=26;AF=0.464;AN=56;BaseQRankSum=0.105;DP=405;FS=6.758;HRun=14;HaplotypeScore=52.1199;InbreedingCoeff=0.7676;MQ=58.06;MQ0=8;MQRankSum=-0.540;QD=8.77;ReadPosRankSum=0.569;VQSLOD=2.3960;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,34:42:64:428,64,0	0/0:11,0:10:20.81:0,21,163	1/1:7,1:5:5.75:38,6,0	0/0:8,0:5:5.99:0,6,48	0/0:3,0:14:8.52:0,9,95	0/0:4,0:14:22.84:0,23,119	0/0:6,0:7:5.74:0,6,30	1/1:13,12:24:35.01:227,35,0	1/1:3,6:8:8.93:62,9,0	0/0:19,0:19:21.02:0,21,195	0/0:17,0:17:29.97:0,30,265	0/1:8,1:7:2.56:3,0,121	0/0:12,0:12:23.90:0,24,203	0/0:14,0:13:12.44:0,12,104	0/1:9,2:10:5.56:6,0,96	0/0:17,0:19:36.01:0,36,290	1/1:7,14:22:40.68:273,41,0	1/1:4,18:22:47.52:328,48,0	1/1:3,10:12:29.74:205,30,0	1/1:3,7:10:14.24:90,14,0	1/1:5,4:8:11.77:76,12,0	0/0:1,1:1:0:0,0,0	0/0:10,0:10:12.01:0,12,111	0/0:16,0:16:26.96:0,27,237	0/0:4,0:15:17.17:0,17,91	1/1:11,11:22:4.81:178,5,0	1/1:2,10:12:29.74:205,30,0	1/1:5,4:7:8.92:62,9,0
chr10	110567061	.	GC	G	4891.59	PASS	AB=0.857;AC=47;AF=0.979;AN=48;BaseQRankSum=-0.626;DP=218;FS=3.643;HRun=1;HaplotypeScore=29.2402;InbreedingCoeff=-0.0788;MQ=24.53;MQ0=55;MQRankSum=1.674;QD=31.16;ReadPosRankSum=1.325;VQSLOD=4.4121;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,5:5:15.05:209,15,0	1/1:0,5:5:15.05:209,15,0	./.	./.	1/1:0,7:7:15.05:207,15,0	1/1:0,10:10:27.09:376,27,0	1/1:3,7:7:18.06:251,18,0	0/1:5,1:2:13.95:36,0,14	1/1:0,2:2:3.01:42,3,0	1/1:0,7:7:21.07:287,21,0	1/1:1,7:7:21.07:291,21,0	1/1:0,3:3:3.01:42,3,0	1/1:1,5:5:15.05:208,15,0	1/1:1,2:2:3.01:42,3,0	1/1:1,8:8:24.08:334,24,0	1/1:0,9:9:27.05:355,27,0	./.	1/1:2,3:2:6.02:84,6,0	1/1:2,1:1:3.01:42,3,0	1/1:0,10:9:27.09:375,27,0	1/1:2,1:2:3.01:42,3,0	1/1:0,2:2:3.01:42,3,0	1/1:1,8:8:21.07:291,21,0	./.	1/1:0,8:8:18.06:251,18,0	1/1:0,15:15:42.14:585,42,0	1/1:0,3:3:9.03:125,9,0	1/1:0,4:4:12.04:167,12,0
chr10	110567090	.	GCCCC	G	1712.47	PASS	AB=0.616;AC=26;AF=0.619;AN=42;BaseQRankSum=5.064;DP=276;FS=18.597;HRun=7;HaplotypeScore=50.5530;InbreedingCoeff=0.5155;MQ=50.27;MQ0=35;MQRankSum=-2.674;QD=15.57;ReadPosRankSum=4.376;VQSLOD=-0.4857;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:5:3:26,3,0	0/0:9,0:7:12.04:0,12,301	0/0:41,0:7:18.49:0,18,244	0/0:46,0:10:10.35:0,10,301	1/1:5,0:8:9.03:119,9,0	1/1:4,3:12:14.68:232,15,0	0/1:2,9:15:24.97:401,0,25	0/0:5,1:4:6.01:0,6,70	./.	0/0:12,0:9:24.04:0,24,560	0/0:15,0:13:30.02:0,30,700	1/1:4,3:6:3.01:35,3,0	./.	./.	1/1:4,2:4:8.92:123,9,0	0/0:11,0:10:24.08:0,24,630	./.	./.	./.	1/1:6,1:5:3.90:47,4,0	./.	1/1:2,1:3:3.01:53,3,0	1/1:5,4:9:14.79:220,15,0	1/1:1,1:2:3.01:39,3,0	1/1:3,3:9:12.04:172,12,0	0/1:9,7:15:99:294,0,131	1/1:3,1:2:3.01:54,3,0	1/1:2,1:3:3.01:54,3,0
chr10	110568799	.	C	CTT	5003.04	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-2.438;DP=563;FS=0.378;HRun=11;HaplotypeScore=77.1928;InbreedingCoeff=0.9030;MQ=68.34;MQ0=5;MQRankSum=-1.637;QD=19.54;ReadPosRankSum=-2.572;VQSLOD=3.5738;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,17:27:49.03:552,49,0	0/0:3,0:3:9.01:0,9,87	0/0:16,0:13:17.95:0,18,143	0/0:9,0:8:8.99:0,9,83	0/0:20,0:20:44.93:0,45,425	0/0:17,0:17:42.01:0,42,402	0/0:18,0:20:35.65:0,36,326	1/1:13,15:30:23.17:495,23,0	1/1:2,4:7:8.99:106,9,0	0/0:21,0:21:35.90:0,36,342	0/0:15,0:15:33:0,33,320	0/0:14,0:14:33:0,33,314	0/0:22,0:22:50.95:0,51,479	0/0:20,0:22:44.71:0,45,469	0/0:25,0:26:38.87:0,39,421	0/0:30,0:31:65.94:0,66,634	1/1:7,15:27:52.08:619,52,0	1/1:4,7:13:23.54:291,24,0	1/1:14,12:29:26.89:553,27,0	1/1:5,20:27:36.21:593,36,0	1/1:4,17:21:36.12:507,36,0	0/0:20,0:20:45.03:0,45,431	0/0:16,0:18:31.10:0,31,332	0/0:31,0:32:74.79:0,75,710	0/1:13,0:13:10.20:10,0,258	1/1:12,14:27:22.24:532,22,0	1/1:4,14:22:47.01:542,47,0	1/1:0,7:8:15.05:202,15,0
chr10	110570057	.	C	CAAAAAA	4861.61	PASS	AB=0.958;AC=35;AF=0.625;AN=56;BaseQRankSum=-0.453;DP=552;FS=1.027;HRun=12;HaplotypeScore=113.1909;InbreedingCoeff=0.4024;MQ=47.56;MQ0=7;MQRankSum=-5.978;QD=11.74;ReadPosRankSum=-4.297;VQSLOD=0.4747;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,3:36:14.97:320,15,0	0/0:10,0:10:13.22:0,13,273	0/1:7,0:5:13.79:20,0,14	0/1:7,0:7:34.05:34,0,96	1/1:11,1:23:14.95:255,15,0	1/1:6,2:20:21.06:507,21,0	1/1:15,0:15:16.21:248,16,0	1/1:34,0:31:46.41:611,46,0	1/1:18,0:17:17.13:224,17,0	0/0:24,0:27:59.43:0,59,863	0/0:15,0:17:32.33:0,32,425	0/0:27,0:25:17.05:0,17,229	0/1:15,0:15:19.19:19,0,97	0/1:16,0:15:59.28:63,0,59	0/1:21,0:21:76.81:77,0,164	0/0:20,0:22:53.87:0,54,785	1/1:13,1:15:22.14:328,22,0	1/1:10,0:23:15.04:378,15,0	1/1:19,0:18:34.07:376,34,0	1/1:13,12:26:10.75:277,11,0	1/1:6,1:11:8.01:111,8,0	0/0:14,0:14:1.88:0,2,88	0/0:19,0:18:13.49:0,13,131	0/1:16,0:15:18.48:18,0,95	1/1:6,12:19:11.98:196,12,0	1/1:26,1:25:51.94:585,52,0	1/1:22,0:20:25.15:153,25,0	0/1:7,1:12:16.35:60,0,16
chr10	110570064	.	AAAAAAG	A	1261.92	PASS	AB=0.700;AC=13;AF=0.232;AN=56;BaseQRankSum=3.004;DP=534;FS=0.000;HRun=0;HaplotypeScore=116.0465;InbreedingCoeff=0.8627;MQ=49.68;MQ0=4;MQRankSum=-4.508;QD=10.26;ReadPosRankSum=3.000;VQSLOD=2.0145;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:37:23.21:0,23,400	0/0:10,0:10:23.31:0,23,704	0/0:11,0:7:20.98:0,21,322	0/0:9,0:8:22.88:0,23,405	0/0:22,0:20:21:0,21,368	0/0:19,0:19:27.09:0,27,651	0/0:14,0:14:23.29:0,23,345	0/0:35,0:32:63.03:0,63,938	0/0:18,0:18:36.04:0,36,577	0/0:27,0:27:75.22:0,75,2011	0/0:16,0:16:42.14:0,42,1208	1/1:23,0:22:27.02:248,27,0	1/1:16,0:16:17.53:178,18,0	1/1:15,0:14:13.62:182,14,0	1/1:21,0:21:31.31:319,31,0	0/0:23,0:23:60.14:0,60,1601	0/0:17,0:16:32.98:0,33,578	0/0:23,0:22:18.03:0,18,404	0/0:19,0:18:44.41:0,44,816	0/0:20,0:20:18.06:0,18,428	0/0:12,0:12:17.94:0,18,230	1/1:16,0:16:17.98:160,18,0	1/1:18,0:17:21.49:194,21,0	0/1:8,6:13:45.63:169,0,46	0/0:18,0:18:18:0,18,398	0/0:25,0:23:54.20:0,54,842	0/0:25,0:23:38.53:0,39,749	0/0:9,0:9:5.98:0,6,76
chr10	110570065	.	AAAAAG	A	2391.44	PASS	AB=0.875;AC=13;AF=0.232;AN=56;BaseQRankSum=0.121;DP=531;FS=2.556;HRun=0;HaplotypeScore=105.5713;InbreedingCoeff=0.8651;MQ=49.85;MQ0=4;MQRankSum=-5.354;QD=19.60;ReadPosRankSum=2.484;VQSLOD=3.1482;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:37:26.31:0,26,341	0/0:10,0:10:22.47:0,22,604	0/0:11,0:7:19.87:0,20,280	0/0:9,0:8:21.27:0,21,322	0/0:21,0:19:18.47:0,18,328	0/0:19,0:19:30.03:0,30,565	0/0:14,0:14:23.09:0,23,256	0/0:34,0:31:48.90:0,49,766	0/0:18,0:18:33.01:0,33,413	0/0:27,0:27:75.21:0,75,1725	0/0:16,0:16:42.14:0,42,1029	1/1:5,18:22:27.09:498,27,0	1/1:2,14:16:17.68:330,18,0	1/1:11,4:14:33.40:380,33,0	1/1:13,8:21:39:572,39,0	0/0:23,0:23:60.15:0,60,1381	0/0:18,0:17:35.89:0,36,505	0/0:23,0:22:17.97:0,18,334	0/0:19,0:18:41:0,41,634	0/0:19,0:19:21.06:0,21,363	0/0:12,0:12:14.93:0,15,169	1/1:2,13:15:18.02:296,18,0	1/1:2,16:17:21.54:388,22,0	0/1:12,2:13:21.13:115,0,21	0/0:17,0:17:15.05:0,15,328	0/0:25,0:23:53.47:0,53,667	0/0:26,0:24:34.10:0,34,584	0/0:9,0:9:5.95:0,6,58
chr10	110573351	.	G	GA	2178.70	PASS	AB=0.750;AC=20;AF=0.357;AN=56;BaseQRankSum=-5.270;DP=527;FS=2.175;HRun=14;HaplotypeScore=68.0161;InbreedingCoeff=0.2393;MQ=77.87;MQ0=0;MQRankSum=-0.298;QD=7.10;ReadPosRankSum=-2.428;VQSLOD=2.1538;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,19:28:8.70:168,0,9	0/0:4,0:5:10.90:0,11,64	0/1:22,0:17:16.43:16,0,25	0/0:18,0:14:2.78:0,3,7	0/0:22,0:24:33.40:0,33,202	0/0:19,0:21:31.40:0,31,187	0/0:16,1:20:15.10:0,15,203	1/1:13,13:27:16.99:250,17,0	0/1:5,12:17:5.55:202,0,6	0/0:14,0:16:24.68:0,25,146	0/0:13,0:13:7.98:0,8,151	0/0:20,0:21:45.65:0,46,277	0/0:21,0:24:15.74:0,16,147	0/1:13,2:15:2.72:3,0,111	0/0:17,0:17:33.27:0,33,214	0/1:15,4:20:32.61:33,0,190	1/1:4,12:16:0.93:253,1,0	0/1:6,12:19:12.35:179,0,12	1/1:18,2:20:17.88:139,18,0	1/1:7,18:25:22.53:278,23,0	0/1:4,6:11:11.11:65,0,11	0/1:10,0:13:3.90:4,0,91	0/0:13,1:15:12.20:0,12,137	0/0:12,0:12:17.62:0,18,115	0/0:12,0:13:25.60:0,26,159	0/1:11,16:27:45.30:247,0,45	1/1:25,11:36:31.40:452,31,0	0/1:5,3:8:7.27:67,0,7
chr10	110573573	.	GC	G	1177.65	PASS	AB=0.959;AC=27;AF=0.482;AN=56;BaseQRankSum=1.696;DP=278;FS=125.835;HRun=1;HaplotypeScore=37.7214;InbreedingCoeff=-0.2536;MQ=80.42;MQ0=1;MQRankSum=-2.851;QD=5.21;ReadPosRankSum=-2.834;VQSLOD=0.3926;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,1:11:25.41:25,0,60	0/0:5,0:5:8.75:0,9,60	0/1:20,2:17:52.03:52,0,173	0/0:11,0:9:4.08:0,4,77	0/1:7,0:7:26.04:26,0,74	1/1:9,1:10:10.02:92,10,0	0/1:21,1:22:53.07:53,0,117	0/0:12,0:12:21.74:0,22,183	0/1:14,1:15:16.06:118,0,16	0/1:5,0:5:39.74:40,0,51	0/1:7,0:7:30.88:50,0,31	1/1:3,0:3:5.94:44,6,0	1/1:5,0:5:5.18:42,5,0	0/1:4,0:4:11.90:12,0,18	0/1:7,0:7:13.05:47,0,13	0/1:9,0:9:17.44:17,0,115	0/1:32,0:32:71.91:260,0,72	0/1:5,1:6:15.92:30,0,16	0/1:11,1:12:37.28:37,0,138	0/1:6,0:6:13.07:54,0,13	0/0:13,0:13:17.89:0,18,135	0/1:3,0:3:18.62:19,0,19	0/0:3,0:3:3:0,3,25	0/0:8,0:8:19.89:0,20,116	0/1:8,1:9:4.15:75,0,4	0/1:8,1:9:4.49:4,0,61	1/1:14,1:15:20.12:141,20,0	1/1:7,0:7:13.14:107,13,0
chr10	110573574	.	CG	C	1001.24	PASS	AB=0.886;AC=31;AF=0.554;AN=56;BaseQRankSum=-3.042;DP=280;FS=2.694;HRun=11;HaplotypeScore=44.5467;InbreedingCoeff=0.0912;MQ=78.80;MQ0=1;MQRankSum=-1.732;QD=4.30;ReadPosRankSum=1.329;VQSLOD=-0.0674;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,1:11:16.42:94,16,0	0/0:4,0:5:5.83:0,6,38	0/1:21,0:17:10.75:11,0,117	0/0:10,0:8:4.72:0,5,54	1/1:8,0:8:5.92:40,6,0	1/1:8,1:10:10.98:73,11,0	1/1:10,12:22:10.08:116,10,0	1/1:8,1:9:2.97:25,3,0	0/1:12,4:16:38.65:106,0,39	0/0:6,0:6:2:0,2,25	0/0:6,1:7:0.15:0,0,1	0/0:3,0:3:0.05:0,0,0	0/0:5,0:5:5.53:0,6,47	0/0:3,0:3:3.85:0,4,22	1/1:7,0:7:0.06:1,0,0	0/1:6,2:8:36.98:37,0,92	1/1:27,5:33:11.54:274,12,0	0/1:5,1:6:14.81:33,0,15	0/1:11,1:12:21.35:33,0,21	1/1:6,0:6:1.62:9,2,0	1/1:7,7:14:2.94:20,3,0	1/1:3,0:3:0.89:2,1,0	0/1:4,0:4:0:0,0,0	0/0:8,0:8:2.97:0,3,20	0/1:10,1:11:5.03:61,0,5	0/1:8,0:9:7.92:44,0,8	0/1:11,3:14:11.50:153,0,11	1/1:7,0:8:5.10:15,5,0
chr10	110574863	.	T	TA	4243.74	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-10.467;DP=528;FS=0.781;HRun=11;HaplotypeScore=58.3902;InbreedingCoeff=0.9727;MQ=75.65;MQ0=0;MQRankSum=-0.585;QD=19.56;ReadPosRankSum=1.462;VQSLOD=5.8964;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:32.82:0,33,252	0/0:11,0:11:26.87:0,27,206	0/0:18,0:19:7.92:0,8,161	0/0:12,0:13:26.18:0,26,190	1/1:9,21:30:39.83:573,40,0	1/1:3,13:16:39.08:396,39,0	1/1:4,8:12:21.03:208,21,0	0/0:34,0:34:82.99:0,83,612	0/0:13,0:13:29.88:0,30,232	0/0:21,1:22:23.31:0,23,362	0/0:21,0:24:59.88:0,60,436	1/1:5,12:17:12.84:312,13,0	1/1:7,12:19:24.05:243,24,0	1/1:3,13:16:29.98:291,30,0	1/1:3,22:25:57.06:579,57,0	0/0:16,0:16:32.83:0,33,251	0/0:18,0:18:50.80:0,51,395	0/0:11,0:12:28.90:0,29,211	0/0:17,0:17:29.85:0,30,230	0/0:24,1:26:40.33:0,40,485	0/0:7,0:7:8.96:0,9,70	1/1:9,12:21:15.80:331,16,0	1/1:4,17:21:48.10:487,48,0	1/1:5,9:14:27.05:274,27,0	1/1:5,19:26:22.30:550,22,0	0/0:22,0:22:41.78:0,42,325	0/0:29,0:29:74.67:0,75,580	0/0:10,0:10:23.89:0,24,186
chr10	110576308	.	T	TG	652.86	PASS	AB=0.681;AC=32;AF=0.667;AN=48;BaseQRankSum=-1.509;DP=215;FS=0.958;HRun=9;HaplotypeScore=45.6801;InbreedingCoeff=0.4093;MQ=89.80;MQ0=3;MQRankSum=-0.582;QD=5.73;ReadPosRankSum=-0.610;VQSLOD=-0.0873;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:8:5.83:34,6,0	0/0:6,0:6:14.99:0,15,128	0/0:43,0:20:4.26:0,4,156	0/0:24,0:13:16.57:0,17,86	1/1:1,1:7:5.67:28,6,0	1/1:0,0:5:2.98:21,3,0	1/1:1,0:9:2.98:21,3,0	0/1:6,0:7:0.01:0,0,0	./.	0/0:6,0:6:11.48:0,11,102	0/0:6,0:6:14.88:0,15,109	1/1:0,5:5:6.02:66,6,0	1/1:2,3:5:1.28:37,1,0	1/1:3,6:9:20.96:199,21,0	0/1:4,6:10:4.58:176,0,5	0/0:6,0:6:6.88:0,7,54	./.	1/1:1,0:4:11.45:62,11,0	1/1:3,0:4:5.71:32,6,0	1/1:1,0:4:2.88:15,3,0	1/1:3,0:3:5.47:25,5,0	./.	0/1:1,3:3:0.94:11,0,1	0/1:5,3:8:17.03:28,0,17	1/1:0,0:1:2.94:18,3,0	1/1:0,0:10:3.27:14,3,0	1/1:0,0:7:2.84:15,3,0	./.
chr10	110576869	.	AAAAT	A	1724.87	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-4.590;DP=424;FS=10.576;HRun=0;HaplotypeScore=88.8493;InbreedingCoeff=0.3607;MQ=61.31;MQ0=11;MQRankSum=-0.737;QD=9.22;ReadPosRankSum=-2.608;VQSLOD=0.5292;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:37:13.04:13,0,171	0/0:4,0:4:12.03:0,12,218	0/0:46,0:11:20.84:0,21,165	0/0:30,0:8:0.29:0,0,65	1/1:0,6:6:12.04:191,12,0	1/1:0,13:13:27.09:467,27,0	1/1:1,15:16:30.04:520,30,0	0/1:24,0:24:16.81:17,0,213	0/1:5,0:5:0:11,0,0	0/0:11,0:11:33.10:0,33,713	0/0:9,0:9:24.07:0,24,522	0/1:9,0:9:0.13:0,0,97	0/0:10,0:9:6:0,6,175	0/0:10,0:10:26.81:0,27,284	0/0:10,0:10:12.01:0,12,123	0/0:15,0:15:42.14:0,42,984	0/0:32,0:32:10.01:0,10,95	0/0:15,0:15:23.92:0,24,136	0/1:21,0:21:34.67:35,0,146	0/1:15,0:15:48.40:48,0,71	0/0:9,0:9:13.65:0,14,72	0/0:3,0:3:3.79:0,4,68	0/0:9,0:8:15.52:0,16,156	0/0:6,0:6:15.04:0,15,190	1/1:1,17:18:35.99:587,36,0	0/0:14,0:13:5.78:0,6,124	0/1:22,0:21:2.68:3,0,51	0/0:4,0:4:5.65:0,6,32
chr10	110576870	.	AAATT	A	3469.55	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=1.753;DP=421;FS=1.661;HRun=0;HaplotypeScore=83.1175;InbreedingCoeff=0.4436;MQ=61.45;MQ0=11;MQRankSum=-1.999;QD=11.23;ReadPosRankSum=3.631;VQSLOD=2.8221;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:36,1:36:46.62:434,47,0	0/0:4,0:4:12.04:0,12,239	0/0:46,0:11:17.21:0,17,241	0/1:30,0:8:0.15:0,0,71	1/1:6,0:6:11.96:110,12,0	1/1:13,0:13:27.06:282,27,0	1/1:15,0:15:30.05:300,30,0	0/1:23,0:23:8.53:275,0,9	1/1:5,0:5:11.82:90,12,0	0/0:11,0:11:33.11:0,33,770	0/0:11,0:11:30.10:0,30,622	0/1:9,0:9:5.33:52,0,5	0/1:10,0:9:29.96:35,0,30	0/0:10,0:10:15.73:0,16,101	0/0:9,0:9:6.53:0,7,22	0/0:15,0:15:42.08:0,42,990	1/1:31,1:32:60.72:379,61,0	1/1:15,0:15:13.18:104,13,0	1/1:20,1:21:21.61:323,22,0	1/1:13,2:15:23.02:230,23,0	0/1:9,0:9:2.02:64,0,2	0/1:3,0:3:14.27:14,0,46	0/1:8,0:7:14.97:15,0,32	0/0:6,0:6:11.65:0,12,83	1/1:17,0:18:35.66:350,36,0	0/1:15,0:14:40.54:200,0,41	1/1:21,0:20:29.22:198,29,0	1/1:4,0:4:1.60:14,2,0
chr10	110576871	.	AATT	A	6111.56	PASS	AB=0.907;AC=39;AF=0.696;AN=56;BaseQRankSum=4.801;DP=418;FS=2.828;HRun=0;HaplotypeScore=68.3019;InbreedingCoeff=0.5671;MQ=61.54;MQ0=11;MQRankSum=-2.393;QD=20.24;ReadPosRankSum=4.353;VQSLOD=4.4337;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,33:35:74.73:1061,75,0	0/0:4,0:4:12.04:0,12,210	0/0:46,0:11:16.78:0,17,222	0/0:30,0:8:13.77:0,14,71	1/1:6,0:6:8.91:32,9,0	1/1:13,0:13:22.03:85,22,0	1/1:15,0:15:22.59:82,23,0	1/1:1,21:23:62.20:669,62,0	1/1:1,4:5:11.93:141,12,0	0/0:11,0:11:33.11:0,33,656	0/0:10,0:10:30.07:0,30,534	1/1:9,0:9:18.95:104,19,0	1/1:10,0:9:18.29:97,18,0	0/1:10,0:10:20.55:62,0,21	1/1:10,0:10:7.81:35,8,0	0/0:15,0:15:39.13:0,39,798	1/1:1,31:32:63.03:940,63,0	1/1:3,11:14:26.06:336,26,0	1/1:4,16:20:53.58:674,54,0	1/1:2,13:15:32.86:397,33,0	1/1:0,9:9:15.01:228,15,0	0/1:3,0:3:14.45:14,0,25	0/1:8,0:7:0.58:57,0,1	0/1:6,0:6:12.48:12,0,23	1/1:18,0:18:29.65:128,30,0	0/1:2,13:14:25.56:452,0,26	1/1:2,19:20:29.75:431,30,0	1/1:2,2:4:6.01:73,6,0
chr10	110576872	.	ATT	A	4487.50	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=5.217;DP=418;FS=1.295;HRun=8;HaplotypeScore=68.7250;InbreedingCoeff=0.7338;MQ=62.89;MQ0=10;MQRankSum=-3.582;QD=14.91;ReadPosRankSum=3.717;VQSLOD=2.0200;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,1:35:74.94:652,75,0	0/0:4,0:4:12.04:0,12,178	0/0:45,0:11:21.31:0,21,224	0/0:31,0:10:2.90:0,3,62	1/1:6,0:6:3.06:8,3,0	1/1:13,0:13:10.90:32,11,0	1/1:15,0:15:8.24:23,8,0	1/1:22,1:23:43.06:429,43,0	1/1:5,0:5:8.97:84,9,0	0/0:11,0:11:33.11:0,33,516	0/0:10,0:10:30.06:0,30,446	1/1:1,4:9:21.01:215,21,0	1/1:2,6:9:21.04:235,21,0	1/1:5,5:10:19.28:221,19,0	1/1:1,8:10:8.76:84,9,0	0/0:14,0:14:39.13:0,39,613	1/1:32,0:32:62.92:524,63,0	1/1:12,2:14:26.99:248,27,0	1/1:18,2:20:49.79:452,50,0	1/1:15,0:15:26.96:231,27,0	1/1:9,0:9:14.98:125,15,0	1/1:1,0:3:2.99:23,3,0	1/1:3,3:7:15.01:156,15,0	1/1:2,4:6:9.03:109,9,0	1/1:18,0:18:13.52:43,14,0	0/1:15,0:14:9.10:288,0,9	1/1:21,0:20:29.98:267,30,0	1/1:3,0:4:5.79:38,6,0
chr10	110578694	.	ATG	A	4845.83	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.822;DP=653;FS=5.695;HRun=0;HaplotypeScore=73.3097;InbreedingCoeff=0.9955;MQ=82.10;MQ0=0;MQRankSum=-0.680;QD=46.59;ReadPosRankSum=1.340;VQSLOD=5.5504;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.29:0,84,1671	0/0:5,0:5:15.02:0,15,265	0/0:19,0:19:57.02:0,57,1054	0/0:16,0:16:48.16:0,48,865	1/1:0,29:29:84.29:1371,84,0	1/1:0,29:29:81.28:1322,81,0	1/1:0,23:23:66.23:1076,66,0	0/0:49,0:49:99:0,147,2946	0/0:30,0:30:90.31:0,90,1828	0/0:22,0:22:66.23:0,66,1341	0/0:21,0:21:63.22:0,63,1279	0/0:23,0:23:69.22:0,69,1366	0/0:26,0:26:78.27:0,78,1582	0/0:22,0:22:66.23:0,66,1341	0/0:27,0:27:81.26:0,81,1609	0/0:22,0:22:66.23:0,66,1330	0/0:23,0:23:69.24:0,69,1402	0/0:12,0:12:36.12:0,36,731	0/0:22,0:22:66.21:0,66,1297	0/0:25,0:25:75.26:0,75,1524	0/0:22,0:22:66.20:0,66,1303	0/0:24,0:24:72.25:0,72,1462	0/0:23,0:23:69.24:0,69,1402	0/0:16,0:16:48.16:0,48,958	1/1:0,23:23:66.23:1077,66,0	0/0:23,0:23:69.24:0,69,1393	0/0:36,0:36:99:0,108,2182	0/0:13,0:13:39.13:0,39,792
chr10	110578979	.	G	GC	22260.42	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-12.984;DP=692;FS=6.389;HRun=2;HaplotypeScore=62.0836;InbreedingCoeff=0.9817;MQ=78.69;MQ0=0;MQRankSum=-1.834;QD=38.98;ReadPosRankSum=2.480;VQSLOD=5.4443;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,45:47:99:1811,126,0	0/0:7,0:7:21.07:0,21,260	0/0:17,0:17:26.63:0,27,298	0/0:11,0:13:7.23:0,7,89	1/1:0,34:34:93.27:1314,93,0	1/1:0,30:30:84.28:1209,84,0	1/1:1,26:27:66.22:950,66,0	1/1:1,23:24:66.22:948,66,0	1/1:1,23:24:66.22:950,66,0	0/0:19,0:19:57.17:0,57,697	0/0:27,0:27:72.23:0,72,892	1/1:1,31:32:90.30:1296,90,0	1/1:0,26:26:72.24:1037,72,0	1/1:0,17:17:36.12:518,36,0	1/1:1,26:27:69.23:993,69,0	0/0:38,0:38:99:0,108,1326	1/1:0,30:29:84.28:1209,84,0	1/1:1,17:18:51.17:734,51,0	1/1:0,24:24:69.19:954,69,0	1/1:0,30:30:81.23:1138,81,0	1/1:0,29:29:81.27:1166,81,0	1/1:0,19:19:54.18:777,54,0	1/1:1,19:20:54.01:763,54,0	1/1:0,18:18:51.17:734,51,0	1/1:2,20:22:63.17:866,63,0	1/1:1,31:32:90.30:1296,90,0	1/1:1,31:32:84.28:1208,84,0	1/1:0,9:9:27.09:389,27,0
chr10	110579348	.	TTTC	T	1589.63	PASS	AB=0.986;AC=16;AF=0.286;AN=56;BaseQRankSum=3.981;DP=560;FS=15.790;HRun=0;HaplotypeScore=127.2856;InbreedingCoeff=-0.2068;MQ=58.63;MQ0=19;MQRankSum=-3.847;QD=5.23;ReadPosRankSum=1.821;VQSLOD=1.7083;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:17:39.04:39,0,49	0/0:5,0:5:9.73:0,10,89	0/1:38,0:12:3.30:3,0,154	0/0:37,0:10:12.44:0,12,159	0/1:28,1:29:29.09:280,0,29	0/1:15,2:17:49.58:143,0,50	0/1:14,0:13:58.70:60,0,59	0/0:34,0:34:35.56:0,36,337	0/1:17,0:17:20.40:20,0,45	0/0:29,0:27:31.25:0,31,890	0/0:16,0:15:37.88:0,38,558	0/1:16,0:15:49.42:82,0,49	0/1:24,0:24:77.30:162,0,77	0/1:16,1:16:13.89:165,0,14	1/1:23,0:23:30.28:305,30,0	0/0:15,0:15:38.06:0,38,527	0/0:12,0:11:22.26:0,22,99	0/0:13,0:12:28.10:0,28,138	0/0:18,0:16:41.04:0,41,296	0/0:28,0:26:48.97:0,49,213	0/0:5,0:5:8.66:0,9,66	0/1:12,0:12:40.08:84,0,40	0/1:20,0:20:28.23:144,0,28	0/1:7,0:7:41.16:41,0,44	0/1:27,0:27:87.83:218,0,88	0/1:25,0:22:3.79:4,0,139	0/0:36,0:35:54.27:0,54,262	0/0:8,0:8:13.96:0,14,157
chr10	110579349	.	TTC	T	923.57	PASS	AB=0.996;AC=19;AF=0.339;AN=56;BaseQRankSum=9.338;DP=554;FS=5.779;HRun=0;HaplotypeScore=119.9952;InbreedingCoeff=-0.2821;MQ=58.20;MQ0=19;MQRankSum=-7.915;QD=2.60;ReadPosRankSum=1.300;VQSLOD=2.1741;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:17:10.27:72,0,10	0/1:5,0:5:9.17:9,0,43	0/0:38,0:12:5.92:0,6,130	0/0:36,0:9:12.54:0,13,147	0/1:28,0:28:79.20:79,0,94	0/1:16,0:16:42.75:43,0,77	0/0:13,0:12:13.54:0,14,93	0/1:34,0:34:39.46:39,0,204	1/1:15,2:17:11.68:162,12,0	0/0:29,0:27:21.25:0,21,693	0/0:16,0:15:37.45:0,37,446	0/1:16,0:15:18.28:18,0,61	0/1:24,0:24:15.16:15,0,91	0/1:16,0:15:26.92:50,0,27	1/1:24,0:24:11.87:172,12,0	0/0:14,0:14:24.60:0,25,388	0/1:11,0:10:15.01:15,0,43	0/1:13,0:12:19.61:20,0,36	0/1:18,0:16:8.89:9,0,160	0/1:28,0:26:31.49:83,0,31	0/0:5,0:5:7.72:0,8,43	0/0:12,0:12:0.03:0,0,58	0/0:20,0:20:2.93:0,3,59	0/0:7,0:7:0.79:0,1,42	0/1:27,0:27:47.68:48,0,122	0/1:23,1:21:64.37:132,0,64	0/1:35,1:35:54.29:117,0,54	0/0:9,0:9:5.10:0,5,92
chr10	110579351	.	CTTT	C	3501.08	PASS	AB=0.732;AC=20;AF=0.357;AN=56;BaseQRankSum=-4.916;DP=566;FS=1.510;HRun=13;HaplotypeScore=125.6121;InbreedingCoeff=0.1680;MQ=55.02;MQ0=20;MQRankSum=-3.122;QD=10.64;ReadPosRankSum=2.454;VQSLOD=1.2942;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,1:16:15.25:15,0,66	0/0:3,0:4:10.24:0,10,109	0/1:35,0:10:2.12:2,0,45	0/0:37,0:9:3.02:0,3,88	1/1:17,13:30:48.97:629,49,0	0/1:14,3:17:10.99:249,0,11	1/1:9,3:11:18:216,18,0	0/1:16,1:35:13.25:13,0,106	0/0:8,0:17:3.83:0,4,20	0/0:29,0:26:52.60:0,53,834	0/0:17,0:17:41.83:0,42,589	1/1:6,9:14:17.06:187,17,0	0/1:11,13:24:5.93:360,0,6	0/1:9,10:18:8.40:256,0,8	0/1:16,8:24:3.37:410,0,3	0/0:15,0:15:35.70:0,36,544	0/0:5,0:10:12.19:0,12,65	0/0:7,0:12:17.57:0,18,89	0/1:12,0:18:5.59:6,0,84	0/0:10,0:24:32.46:0,32,156	0/0:4,0:4:5.69:0,6,48	1/1:4,8:12:7.65:239,8,0	0/1:5,14:20:12.63:368,0,13	0/1:4,3:8:0.93:97,0,1	0/1:14,13:27:6.54:446,0,7	0/0:12,0:24:31.74:0,32,154	0/0:21,0:35:34.26:0,34,174	0/1:9,0:10:9.65:10,0,170
chr10	110579375	.	TTC	T	148.58	PASS	AB=0.982;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.952;DP=549;FS=17.240;HRun=0;HaplotypeScore=126.3227;InbreedingCoeff=-0.1682;MQ=38.44;MQ0=33;MQRankSum=-7.744;QD=0.55;ReadPosRankSum=-1.830;VQSLOD=1.2428;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:20:15.01:0,15,259	0/0:4,0:4:11.73:0,12,74	1/1:20,0:2:4.80:27,5,0	0/1:31,0:4:4.25:8,0,4	0/0:25,0:23:8.77:0,9,312	0/1:13,1:14:0.87:1,0,162	0/0:9,0:8:11.86:0,12,97	0/1:39,2:37:60.17:60,0,430	0/0:18,0:18:33.61:0,34,301	0/0:29,0:25:23.41:0,23,435	0/0:19,0:16:2.50:0,3,228	0/1:13,0:11:16.35:16,0,83	0/1:21,0:21:34.54:35,0,220	0/1:20,0:18:33.28:33,0,85	0/1:26,0:26:22.09:22,0,215	0/0:13,0:13:23.85:0,24,251	0/0:14,0:11:2.31:0,2,132	0/1:13,0:12:6.26:6,0,123	0/1:19,0:17:1.63:2,0,190	0/1:27,1:26:0.17:0,0,388	0/1:4,0:4:6.93:7,0,27	0/1:10,1:11:51.93:52,0,105	0/0:21,0:20:20.20:0,20,264	0/1:9,0:9:18.95:19,0,66	0/0:25,0:25:4.20:0,4,249	0/0:27,0:24:7.97:0,8,399	0/0:37,0:35:51.68:0,52,505	0/0:11,0:10:15.30:0,15,169
chr10	110579379	.	T	TTTC	3900.98	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=1.977;DP=539;FS=29.707;HRun=0;HaplotypeScore=122.6595;InbreedingCoeff=0.2278;MQ=36.13;MQ0=38;MQRankSum=-2.130;QD=10.66;ReadPosRankSum=3.388;VQSLOD=1.5131;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:20:56.31:206,0,56	0/0:4,0:4:4.25:0,4,44	1/1:15,0:1:1.55:4,2,0	0/1:29,0:4:4.60:8,0,5	1/1:18,6:22:44.60:537,45,0	1/1:11,3:14:38.98:474,39,0	1/1:9,1:9:17.78:188,18,0	0/1:38,0:34:67.02:351,0,67	1/1:17,0:17:10.60:278,11,0	0/0:33,0:29:60.41:0,60,625	0/0:17,0:14:39.87:0,40,335	0/0:13,0:11:7.67:0,8,94	0/0:21,0:19:16.65:0,17,178	0/0:17,0:15:6.16:0,6,54	0/0:25,0:25:16.68:0,17,282	0/0:13,0:13:35.75:0,36,368	0/1:15,0:11:16.89:71,0,17	0/1:17,0:15:1.11:144,0,1	0/1:21,0:17:48.46:48,0,118	0/1:28,0:26:23.26:275,0,23	1/1:4,0:4:2.33:20,2,0	0/1:11,0:11:31.01:31,0,100	0/0:21,0:20:13.36:0,13,254	0/0:9,0:9:13.44:0,13,89	1/1:16,7:23:15.48:547,15,0	0/1:28,0:24:99:170,0,124	1/1:35,0:33:18.22:458,18,0	0/1:11,0:10:18.65:90,0,19
chr10	110579380	.	T	TTC	2663.79	PASS	AB=0.992;AC=26;AF=0.464;AN=56;BaseQRankSum=2.972;DP=535;FS=20.622;HRun=0;HaplotypeScore=116.1664;InbreedingCoeff=0.2156;MQ=35.88;MQ0=39;MQRankSum=0.406;QD=7.22;ReadPosRankSum=3.279;VQSLOD=1.6691;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:20:52.24:146,0,52	0/0:3,0:3:4.25:0,4,44	1/1:13,0:1:1.55:4,2,0	0/1:28,0:4:4.37:7,0,4	1/1:23,4:25:37.47:443,37,0	1/1:12,2:14:36.92:324,37,0	1/1:10,0:9:6.20:112,6,0	0/1:38,0:34:62.52:304,0,63	1/1:17,0:17:7.21:236,7,0	0/0:32,0:28:63.60:0,64,608	0/0:17,0:14:24.06:0,24,318	0/0:13,0:11:21.43:0,21,133	0/0:22,0:20:18.12:0,18,217	0/1:16,0:14:3.10:3,0,75	0/0:25,0:25:26.42:0,26,319	0/0:13,0:13:35.73:0,36,362	0/1:14,0:10:33.96:55,0,34	1/1:17,0:15:2.60:105,3,0	0/1:19,0:15:29.72:30,0,131	0/1:28,0:26:35.81:191,0,36	1/1:4,0:4:3.57:30,4,0	0/0:11,0:11:11.89:0,12,115	0/0:20,0:19:26.86:0,27,286	0/0:10,0:10:13.37:0,13,84	0/1:23,0:23:2.41:304,0,2	0/1:28,0:24:99:167,0,138	1/1:35,0:33:8.42:323,8,0	0/1:10,0:10:32.17:57,0,32
chr10	110581741	.	G	GA	3218.15	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-12.510;DP=715;FS=10.231;HRun=3;HaplotypeScore=67.1878;InbreedingCoeff=0.9987;MQ=84.95;MQ0=0;MQRankSum=-0.472;QD=34.60;ReadPosRankSum=0.690;VQSLOD=3.7219;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,1665	0/0:7,0:7:21.06:0,21,252	0/0:24,0:24:66.18:0,66,764	0/0:21,0:21:63.18:0,63,738	1/1:1,19:20:51.13:692,51,0	1/1:2,27:29:72.24:1008,72,0	1/1:2,22:24:63.21:882,63,0	0/0:29,0:29:87.26:0,87,1033	0/0:29,0:29:78.24:0,78,936	0/0:28,0:27:81.23:0,81,960	0/0:18,0:18:48.15:0,48,575	0/0:25,0:25:66.19:0,66,780	0/0:32,0:32:96.29:0,96,1151	0/0:23,0:23:66.20:0,66,791	0/0:24,0:24:72.22:0,72,864	0/0:27,0:27:75.22:0,75,888	0/0:47,0:47:99:0,135,1593	0/0:22,0:22:60.14:0,60,693	0/0:21,0:21:57.15:0,57,662	0/0:26,0:26:72.22:0,72,864	0/0:30,0:30:81.23:0,81,958	0/0:21,0:21:54.15:0,54,637	0/0:20,0:20:48.13:0,48,565	0/0:28,0:28:75.23:0,75,900	1/1:1,19:20:57.19:796,57,0	0/0:25,0:25:66.20:0,66,792	0/0:37,0:37:99:0,105,1259	0/0:10,0:10:30.09:0,30,360
chr10	110585338	.	T	TAC	16530.76	PASS	AB=0.595;AC=40;AF=0.714;AN=56;BaseQRankSum=-9.729;DP=847;FS=1.682;HRun=0;HaplotypeScore=105.7381;InbreedingCoeff=0.6318;MQ=64.07;MQ0=15;MQRankSum=1.509;QD=25.16;ReadPosRankSum=0.794;VQSLOD=5.8661;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,35:48:41.83:1142,42,0	0/0:13,0:13:30.07:0,30,349	0/0:29,0:14:9.85:0,10,148	0/0:38,0:11:11.18:0,11,123	0/1:7,25:33:21.60:675,0,22	1/1:1,22:23:45.15:725,45,0	0/1:11,18:30:27.46:584,0,27	1/1:12,26:37:65.69:1114,66,0	1/1:9,22:31:60.20:966,60,0	0/0:39,0:41:84.16:0,84,1174	0/0:28,0:28:57.17:0,57,692	1/1:2,24:26:57.19:918,57,0	1/1:6,20:26:42.14:677,42,0	1/1:6,14:20:27.09:436,27,0	1/1:9,32:41:44.12:992,44,0	0/0:39,0:40:99:0,108,1275	1/1:7,23:31:51.13:820,51,0	1/1:6,15:22:39.12:597,39,0	1/1:11,8:16:27.02:396,27,0	1/1:7,22:30:42.10:677,42,0	1/1:13,30:47:20.80:835,21,0	1/1:5,26:31:23.61:881,24,0	1/1:1,23:24:51.04:823,51,0	1/1:7,17:24:33.11:532,33,0	0/1:9,25:34:48.81:763,0,49	0/1:12,16:29:59.90:708,0,60	1/1:3,27:32:20.76:834,21,0	1/1:1,14:15:27.56:436,28,0
chr10	110586476	.	CA	C	1379.75	PASS	AB=0.836;AC=33;AF=0.589;AN=56;BaseQRankSum=1.243;DP=420;FS=0.583;HRun=19;HaplotypeScore=58.2425;InbreedingCoeff=0.4172;MQ=45.78;MQ0=28;MQRankSum=1.601;QD=4.34;ReadPosRankSum=4.009;VQSLOD=-0.2137;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,15:22:43.26:207,43,0	0/1:7,0:6:7.81:8,0,16	0/0:5,0:1:2.60:0,3,10	0/0:8,0:2:1.44:0,1,4	0/0:17,1:20:22.83:0,23,135	0/0:15,0:14:11.86:0,12,130	0/1:12,1:13:7.82:8,0,33	1/1:12,10:20:24.69:125,25,0	1/1:6,10:15:22.62:113,23,0	0/0:13,0:12:6.41:0,6,43	0/0:12,1:14:3.92:0,4,86	0/1:8,0:9:5.37:27,0,5	1/1:9,1:10:12.54:64,13,0	0/1:7,1:10:9.05:20,0,9	0/1:16,2:20:13.20:69,0,13	0/0:10,0:10:13.77:0,14,105	1/1:7,18:23:45.11:226,45,0	1/1:5,5:10:13.99:70,14,0	1/1:11,5:15:16.21:82,16,0	0/1:15,10:25:0.80:85,0,1	1/1:6,5:9:11.33:56,11,0	1/1:11,5:16:13.16:62,13,0	0/1:5,5:10:6.17:6,0,19	1/1:8,1:9:10.98:51,11,0	0/0:15,0:13:7.09:0,7,113	1/1:15,9:23:9.29:89,9,0	1/1:10,18:27:10.37:150,10,0	1/1:8,3:6:8.42:42,8,0
chr10	110587340	.	TAAA	T	6830.34	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=3.657;DP=591;FS=8.757;HRun=14;HaplotypeScore=122.6793;InbreedingCoeff=0.9980;MQ=66.14;MQ0=1;MQRankSum=-7.170;QD=18.07;ReadPosRankSum=5.294;VQSLOD=3.0055;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,32:36:83.15:963,83,0	0/0:11,0:13:39.10:0,39,641	0/0:23,0:16:22.49:0,22,285	0/0:20,0:14:23.98:0,24,319	0/0:27,0:29:66.15:0,66,1116	0/0:19,0:22:60.15:0,60,1011	0/0:19,0:20:57.19:0,57,971	1/1:9,16:25:25.04:494,25,0	1/1:2,12:14:30.05:351,30,0	0/0:20,0:21:51.16:0,51,845	0/0:20,0:22:60.16:0,60,1032	1/1:20,0:20:33.09:148,33,0	1/1:20,0:20:41.52:189,42,0	1/1:14,0:14:30.47:138,30,0	1/1:25,0:25:49.62:223,50,0	0/0:20,0:23:54.13:0,54,872	1/1:4,26:31:60.03:684,60,0	1/1:2,14:16:33.03:386,33,0	1/1:5,15:21:44.96:497,45,0	1/1:4,15:20:31.50:383,31,0	1/1:5,11:17:22.54:277,23,0	1/1:14,0:14:24.90:112,25,0	1/1:18,0:18:32.95:146,33,0	1/1:15,0:15:33.59:152,34,0	0/0:17,0:20:57.14:0,57,924	1/1:5,17:22:41.92:479,42,0	1/1:3,26:29:57.09:666,57,0	1/1:2,17:20:48.01:543,48,0
chr10	110587350	.	AAAAAT	A	1798.70	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.623;DP=569;FS=0.876;HRun=0;HaplotypeScore=157.3794;InbreedingCoeff=0.9995;MQ=66.76;MQ0=1;MQRankSum=-11.241;QD=15.78;ReadPosRankSum=3.863;VQSLOD=3.3045;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:94.84:0,95,645	0/0:14,0:14:42.14:0,42,1178	0/0:22,0:15:29.77:0,30,555	0/0:19,0:13:30.97:0,31,643	0/0:24,0:24:69.22:0,69,1878	0/0:24,0:24:72.20:0,72,1864	0/0:20,0:20:60.19:0,60,1595	0/0:22,0:22:63.45:0,63,624	0/0:16,0:16:41.63:0,42,318	0/0:22,0:22:65.96:0,66,1602	0/0:25,0:25:69.22:0,69,1808	1/1:19,0:19:38.45:261,38,0	1/1:16,1:17:44.52:341,45,0	1/1:12,1:13:32.63:259,33,0	1/1:24,1:25:56.30:416,56,0	0/0:19,0:19:57.20:0,57,1530	0/0:29,0:29:60.81:0,61,415	0/0:16,0:16:38.48:0,38,258	0/0:19,0:19:47.32:0,47,330	0/0:18,0:18:46.76:0,47,336	0/0:18,0:18:44.49:0,44,357	1/1:9,0:9:26.70:180,27,0	1/1:15,0:15:36.95:265,37,0	1/1:15,1:16:35.20:275,35,0	0/0:19,0:19:57.20:0,57,1612	0/0:21,0:21:56.48:0,56,427	0/0:32,0:32:71.27:0,71,525	0/0:19,0:19:47.28:0,47,312
chr10	110587351	.	AAAAT	A	4635.32	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.088;DP=559;FS=1.333;HRun=0;HaplotypeScore=136.5523;InbreedingCoeff=0.9910;MQ=68.93;MQ0=1;MQRankSum=-10.831;QD=43.73;ReadPosRankSum=3.656;VQSLOD=5.4204;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:52.16:0,52,242	0/0:14,0:14:42.14:0,42,1005	0/0:22,1:17:16.74:0,17,428	0/0:18,0:13:30.96:0,31,540	0/0:24,0:24:69.16:0,69,1575	0/0:24,0:24:69.20:0,69,1561	0/0:21,0:21:63.19:0,63,1388	0/0:23,0:23:52.73:0,53,378	0/0:16,0:16:30.84:0,31,136	0/0:22,0:22:65.95:0,66,1350	0/0:25,0:25:72.18:0,72,1540	1/1:0,16:16:39.09:644,39,0	1/1:1,15:16:45.15:764,45,0	1/1:1,11:12:33.11:553,33,0	1/1:1,23:24:57.06:935,57,0	0/0:19,0:19:57.18:0,57,1262	0/0:29,0:29:16.81:0,17,103	0/0:16,0:16:22.40:0,22,77	0/0:18,0:18:20.80:0,21,124	0/0:18,0:18:32.75:0,33,149	0/0:18,0:18:35.14:0,35,210	1/1:0,9:9:27.09:467,27,0	1/1:2,12:14:42.05:668,42,0	1/1:1,14:15:36.59:603,37,0	0/0:19,0:19:57.20:0,57,1360	0/0:19,0:19:37.31:0,37,182	0/0:31,0:31:52.36:0,52,248	0/0:19,0:19:14.55:0,15,65
chr10	110587682	.	CA	C	11692.20	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=2.948;DP=397;FS=1.300;HRun=2;HaplotypeScore=43.4130;InbreedingCoeff=0.9936;MQ=89.34;MQ0=0;MQRankSum=-7.443;QD=36.88;ReadPosRankSum=5.022;VQSLOD=4.7864;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:27:81.26:1052,81,0	0/0:5,0:5:15.05:0,15,225	0/0:17,0:17:51.08:0,51,710	0/0:22,0:22:54.17:0,54,795	1/1:1,20:21:63.19:804,63,0	1/1:2,12:14:39.11:491,39,0	1/1:0,13:13:39.13:506,39,0	1/1:0,16:16:45.15:583,45,0	1/1:0,9:9:24.08:312,24,0	0/0:13,0:13:36.11:0,36,500	0/0:15,0:15:45.15:0,45,664	1/1:0,9:9:27.09:351,27,0	1/1:1,15:16:45.15:584,45,0	1/1:0,14:14:39.13:506,39,0	1/1:0,10:10:30.10:389,30,0	0/0:8,0:8:24.08:0,24,358	1/1:0,19:19:51.17:662,51,0	1/1:0,11:11:33.11:428,33,0	1/1:0,10:10:30.10:390,30,0	1/1:0,10:10:21.07:273,21,0	1/1:0,21:21:60.19:779,60,0	1/1:0,11:11:33.11:428,33,0	1/1:0,12:12:36.12:467,36,0	1/1:1,11:12:33.11:429,33,0	1/1:2,19:21:57.18:740,57,0	1/1:0,13:13:39.13:507,39,0	1/1:0,19:19:57.19:740,57,0	1/1:0,8:8:21.07:273,21,0
chr10	110587763	.	AG	A	193.03	PASS	AC=18;AF=0.375;AN=48;BaseQRankSum=-1.306;DP=127;FS=0.000;HRun=10;HaplotypeScore=30.4921;InbreedingCoeff=0.5373;MQ=111.09;MQ0=2;MQRankSum=-0.014;QD=5.52;ReadPosRankSum=3.351;VQSLOD=-0.3134;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:7:11.10:0,11,58	0/0:3,0:3:9.02:0,9,100	0/0:19,2:15:8.30:0,8,121	0/0:16,0:12:15.29:0,15,134	1/1:0,3:3:9:78,9,0	1/1:3,3:6:11.99:104,12,0	1/1:1,3:4:8.87:76,9,0	0/0:4,0:4:3:0,3,26	0/0:2,0:4:5.72:0,6,29	0/0:1,0:1:3.01:0,3,33	0/0:2,0:2:3.01:0,3,33	1/1:3,0:3:4.36:11,4,0	0/0:3,0:3:0.17:0,0,14	1/1:3,0:3:1.55:4,2,0	1/1:4,0:4:7.66:37,8,0	0/0:2,0:2:6.02:0,6,66	./.	./.	0/0:5,0:5:11.56:0,12,67	./.	./.	1/1:5,0:5:3.10:8,3,0	1/1:3,0:3:3.11:8,3,0	1/1:4,0:4:4.65:13,5,0	0/0:2,0:2:0:0,0,0	0/0:5,0:5:5.98:0,6,53	0/0:4,0:4:2.74:0,3,12	0/0:0,0:1:2.90:0,3,16
chr10	110587772	.	GGA	G	519.63	PASS	AB=0.750;AC=13;AF=0.260;AN=50;BaseQRankSum=-0.473;DP=125;FS=2.148;HRun=0;HaplotypeScore=28.4057;InbreedingCoeff=0.6019;MQ=104.60;MQ0=2;MQRankSum=-0.682;QD=19.99;ReadPosRankSum=4.167;VQSLOD=3.5397;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:7:14.80:0,15,118	0/0:4,0:4:12.03:0,12,192	0/0:20,0:13:21.80:0,22,231	0/0:15,0:11:23.98:0,24,313	0/0:3,0:3:8.71:0,9,47	0/0:4,0:4:3.05:0,3,38	0/0:5,0:5:11.81:0,12,99	0/0:9,0:9:20.99:0,21,213	0/0:2,0:2:6.02:0,6,73	0/0:2,0:2:6.02:0,6,86	0/0:1,0:1:3.01:0,3,56	1/1:1,3:4:9.03:126,9,0	0/1:2,1:3:1.72:61,0,2	1/1:0,2:2:3.01:43,3,0	1/1:2,3:5:12.71:144,13,0	0/0:2,0:2:6.02:0,6,112	./.	./.	0/0:6,0:5:12.01:0,12,166	./.	0/0:6,0:6:14.98:0,15,137	1/1:0,3:3:6.02:86,6,0	1/1:0,3:3:6.02:86,6,0	1/1:0,6:6:9.02:128,9,0	0/0:2,0:2:3:0,3,26	0/0:5,0:5:12.02:0,12,150	0/0:1,0:1:3.01:0,3,37	0/0:2,0:2:6:0,6,55
chr10	110588664	.	TGTCGTCAGTGCTGC	T	1095.90	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.520;DP=417;FS=9.283;HRun=0;HaplotypeScore=148.9364;InbreedingCoeff=0.6881;MQ=72.96;MQ0=0;MQRankSum=-5.609;QD=17.12;ReadPosRankSum=1.180;VQSLOD=2.2095;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:39.13:0,39,2406	0/0:3,0:3:6.02:0,6,250	0/0:9,0:9:6.02:0,6,268	0/0:8,0:8:9:0,9,178	0/0:5,4:9:0.94:0,1,1	1/1:7,7:14:9.03:315,9,0	1/1:13,21:34:5.56:236,6,0	0/0:13,0:13:15.05:0,15,648	0/0:10,0:10:24.08:0,24,1353	0/0:19,0:19:39.13:0,39,2430	0/0:2,0:2:3.01:0,3,135	0/0:22,0:22:57.20:0,57,3790	0/0:5,0:5:12.04:0,12,767	0/0:24,0:24:63.22:0,63,3581	0/0:6,0:6:18.06:0,18,1147	0/0:10,0:10:21.07:0,21,1303	0/0:24,0:23:66.23:0,66,4354	0/0:24,0:24:60.21:0,60,3667	0/0:6,0:6:6.02:0,6,168	0/0:7,0:7:12.04:0,12,795	0/0:62,0:62:99:0,111,6889	0/0:6,0:6:6.02:0,6,405	0/0:10,0:10:18.06:0,18,1146	0/0:26,0:26:72.25:0,72,4536	1/1:4,12:16:18.06:669,18,0	0/0:14,0:14:30.10:0,30,1675	0/0:9,0:9:15.05:0,15,919	0/0:5,0:5:15.01:0,15,654
chr10	110589830	.	C	CT	3111.44	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-12.855;DP=619;FS=0.000;HRun=8;HaplotypeScore=55.9450;InbreedingCoeff=0.9706;MQ=64.77;MQ0=0;MQRankSum=1.258;QD=24.89;ReadPosRankSum=0.027;VQSLOD=4.0992;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,123,1109	0/0:13,0:13:39:0,39,350	0/0:9,0:9:14.95:0,15,126	0/0:12,0:11:17.99:0,18,160	0/0:35,0:35:99:0,99,894	0/0:24,0:24:69.04:0,69,632	0/0:20,0:20:56.96:0,57,507	0/0:31,0:31:72:0,72,651	0/0:20,0:20:54.01:0,54,489	0/0:25,0:25:69.04:0,69,631	0/0:23,0:23:57.02:0,57,522	1/1:1,14:15:36.11:415,36,0	1/1:5,12:17:15.72:422,16,0	1/1:2,12:14:33.10:381,33,0	1/1:2,17:19:45.13:519,45,0	0/0:22,0:22:60.02:0,60,547	0/0:22,0:22:57:0,57,515	0/0:22,0:22:63.03:0,63,576	0/0:29,0:29:78.04:0,78,712	0/0:26,0:26:69.03:0,69,632	0/0:15,0:15:39.02:0,39,357	1/1:1,15:16:38.95:415,39,0	1/1:2,26:28:75.22:866,75,0	1/1:5,11:16:5.21:287,5,0	0/0:28,0:28:81.04:0,81,741	0/0:22,0:22:57.02:0,57,519	0/0:30,0:30:81.04:0,81,741	0/0:21,0:21:54.03:0,54,494
chr10	110590059	.	TAA	T	7660.26	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-1.292;DP=533;FS=3.203;HRun=13;HaplotypeScore=72.4956;InbreedingCoeff=0.9898;MQ=67.68;MQ0=2;MQRankSum=-2.338;QD=23.00;ReadPosRankSum=3.610;VQSLOD=4.9428;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,31:36:83.72:814,84,0	0/0:11,0:12:33.08:0,33,454	0/0:12,0:10:20.33:0,20,216	0/0:11,0:11:13.41:0,13,115	0/0:5,0:21:43.01:0,43,190	0/0:4,0:25:52.89:0,53,194	0/0:1,0:14:29.94:0,30,103	1/1:4,25:29:75.06:714,75,0	1/1:2,16:18:39.02:378,39,0	0/0:31,0:33:77.74:0,78,1067	0/0:26,0:27:77.75:0,78,1087	1/1:6,10:16:26.99:262,27,0	1/1:2,15:17:45.04:436,45,0	1/1:3,10:13:27:262,27,0	1/1:3,13:16:36.04:349,36,0	0/0:18,0:18:39.10:0,39,528	1/1:1,20:21:60.07:582,60,0	1/1:1,11:12:27.03:262,27,0	1/1:5,16:21:48.02:454,48,0	1/1:2,18:20:54.08:524,54,0	1/1:1,6:7:18.02:174,18,0	1/1:1,8:9:24.01:233,24,0	1/1:3,11:14:30.04:291,30,0	1/1:2,18:21:45.01:486,45,0	0/0:6,1:24:12.86:0,13,167	1/1:3,16:19:48.95:467,49,0	1/1:4,20:25:62.83:594,63,0	1/1:4,15:19:39.04:378,39,0
chr10	110590251	.	TTTTTG	T	4958.14	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=8.624;DP=683;FS=8.076;HRun=0;HaplotypeScore=137.7878;InbreedingCoeff=0.9053;MQ=59.00;MQ0=10;MQRankSum=-0.498;QD=22.74;ReadPosRankSum=2.186;VQSLOD=4.0430;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:54.18:0,54,1366	0/0:6,0:6:18.06:0,18,511	0/0:36,0:14:15.05:0,15,339	0/1:53,0:21:17.77:18,0,255	0/0:31,0:31:63.21:0,63,1745	0/0:25,0:25:69.24:0,69,1950	0/0:13,0:13:27.09:0,27,649	0/0:26,0:26:30.06:0,30,592	0/0:25,0:25:63.20:0,63,1597	0/0:26,0:26:66.19:0,66,1612	0/0:20,0:20:45.15:0,45,1229	1/1:9,12:21:33.11:611,33,0	1/1:1,17:18:35.71:667,36,0	1/1:4,12:16:27.09:500,27,0	1/1:8,27:35:41.17:1036,41,0	0/0:19,0:19:51.17:0,51,1352	0/0:31,0:31:63.18:0,63,1645	0/0:22,0:22:54.16:0,54,1313	0/0:25,0:25:30.02:0,30,639	0/0:31,0:31:60.20:0,60,1646	0/0:17,0:16:33.11:0,33,899	1/1:9,19:28:54.14:904,54,0	1/1:5,18:23:36.59:667,37,0	1/1:7,17:24:30.10:556,30,0	0/0:17,0:17:36.12:0,36,1002	0/0:21,0:20:39.12:0,39,1003	0/0:34,0:33:84.29:0,84,2287	0/0:11,0:10:24.08:0,24,674
chr10	110594358	.	G	GT	273	PASS	AC=32;AF=0.941;AN=34;DP=100;FS=0.000;HRun=1;HaplotypeScore=33.7679;InbreedingCoeff=0.1309;MQ=32.97;MQ0=6;QD=3.85;VQSLOD=-0.0104;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,0:2:2.74:12,3,0	./.	./.	1/1:1,4:4:2.98:22,3,0	1/1:1,1:2:1.82:5,2,0	1/1:8,3:10:3:25,3,0	1/1:1,0:1:1.25:3,1,0	0/0:2,0:2:0:0,0,0	1/1:0,1:1:2.99:23,3,0	1/1:1,1:2:2.92:17,3,0	1/1:1,0:1:0.89:2,1,0	1/1:4,1:5:8.18:51,8,0	./.	./.	1/1:3,1:3:2.94:18,3,0	1/1:6,1:6:2.60:10,3,0	1/1:7,1:6:11.64:79,12,0	1/1:5,0:4:4.41:15,4,0	./.	1/1:12,2:8:5.24:21,5,0	./.	1/1:1,0:1:2.99:23,3,0	./.	./.	1/1:1,1:2:2.97:20,3,0	./.	./.
chr10	110594457	.	TGTG	T	2248.88	PASS	AB=0.967;AC=24;AF=0.462;AN=52;BaseQRankSum=9.403;DP=1245;FS=25.072;HRun=0;HaplotypeScore=424.3596;InbreedingCoeff=-0.4623;MQ=25.48;MQ0=228;MQRankSum=-3.225;QD=2.17;ReadPosRankSum=-0.498;VQSLOD=0.6873;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:47,5:39:64.02:277,0,64	0/1:20,0:13:18.52:19,0,174	./.	./.	0/1:40,0:34:14.16:14,0,125	0/0:24,0:16:24.76:0,25,227	0/0:45,0:36:9.82:0,10,518	0/1:71,1:37:90.74:91,0,257	0/1:35,8:31:99:236,0,228	0/1:93,0:71:99:142,0,1586	0/0:38,0:28:22.68:0,23,378	0/1:53,0:38:98.09:98,0,335	0/1:40,0:28:11.65:12,0,328	0/1:53,0:38:99:107,0,156	0/1:48,0:30:84.68:85,0,204	0/1:66,0:54:24.09:24,0,1063	0/1:29,0:20:39.43:39,0,218	0/1:20,3:12:60.84:61,0,81	1/1:43,1:10:6.25:62,6,0	1/1:41,6:37:2.25:7,2,0	0/1:82,4:62:52.46:63,0,52	0/1:46,1:42:72:72,0,235	0/0:36,0:29:0.89:0,1,54	0/0:47,0:41:13.25:0,13,137	0/1:38,0:29:7.30:7,0,235	0/1:70,7:53:99:311,0,314	0/1:29,2:25:99:194,0,319	1/1:19,8:20:35.97:483,36,0
chr10	110594459	.	TG	T	5154.37	PASS	AB=0.834;AC=27;AF=0.519;AN=52;BaseQRankSum=10.612;DP=1251;FS=44.575;HRun=2;HaplotypeScore=408.9949;InbreedingCoeff=-0.6248;MQ=25.77;MQ0=218;MQRankSum=-3.434;QD=4.50;ReadPosRankSum=1.109;VQSLOD=0.7818;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:40,16:41:54.95:224,0,55	0/1:15,5:13:72.74:73,0,131	./.	./.	0/1:30,3:33:28.97:29,0,80	0/1:17,0:15:57.44:57,0,88	0/1:37,5:38:98.77:99,0,368	0/1:62,12:36:99:246,0,209	0/1:38,7:33:99:328,0,144	0/1:69,21:71:99:686,0,1121	0/1:31,9:30:0.18:0,0,258	0/1:40,13:38:99:318,0,159	0/1:31,9:28:99:124,0,191	0/1:39,14:39:99:274,0,102	0/1:34,13:29:83.03:248,0,83	0/1:55,11:54:99:269,0,786	0/1:19,11:22:99:363,0,124	0/1:16,6:12:18.64:242,0,19	1/1:45,1:10:13.40:104,13,0	1/1:33,13:37:3.80:41,4,0	0/1:66,21:62:28.90:80,0,29	0/1:31,16:43:99:107,0,156	0/0:23,13:29:4.94:0,5,56	0/0:40,6:41:13.13:0,13,96	0/1:30,2:29:22.41:22,0,158	0/1:67,10:54:99:548,0,244	0/1:23,8:25:99:259,0,186	1/1:22,5:20:44.10:413,44,0
chr10	110594460	.	G	GT	3658.76	PASS	AB=0.915;AC=27;AF=0.519;AN=52;BaseQRankSum=10.355;DP=1267;FS=44.459;HRun=1;HaplotypeScore=427.7995;InbreedingCoeff=-0.6576;MQ=25.92;MQ0=219;MQRankSum=-3.968;QD=3.16;ReadPosRankSum=2.523;VQSLOD=-0.3257;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:58,1:43:51.52:234,0,52	0/1:18,2:13:92.37:92,0,115	./.	./.	0/1:37,2:35:31.44:31,0,73	0/1:21,2:15:82.28:187,0,82	0/1:49,3:42:99:150,0,337	0/1:70,0:35:99:191,0,188	0/1:39,3:33:99:239,0,129	0/1:88,3:73:99:236,0,1044	0/1:39,3:32:4.43:4,0,225	0/1:44,6:38:81.93:255,0,82	0/1:33,1:28:70.17:70,0,76	0/1:44,7:39:64.91:181,0,65	0/1:42,2:29:62.54:182,0,63	0/1:59,5:53:99:105,0,724	0/1:27,1:22:99:238,0,101	0/1:20,3:13:17.31:155,0,17	1/1:45,3:12:8.99:143,9,0	1/1:36,4:37:3.81:21,4,0	0/1:79,3:61:26.55:80,0,27	0/1:44,2:45:64.97:65,0,134	0/0:28,2:29:5.12:0,5,67	0/0:38,2:41:6.95:0,7,57	0/1:36,2:30:94.19:94,0,145	0/1:66,9:54:99:344,0,151	0/1:24,1:25:99:125,0,103	1/1:25,1:20:19.80:233,20,0
chr10	110594486	.	G	GT	682.34	PASS	AB=0.957;AC=17;AF=0.304;AN=56;BaseQRankSum=10.685;DP=1210;FS=70.857;HRun=1;HaplotypeScore=439.0884;InbreedingCoeff=-0.2580;MQ=30.25;MQ0=118;MQRankSum=-9.422;QD=0.99;ReadPosRankSum=-1.903;VQSLOD=-0.5432;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,2:35:74.01:74,0,165	0/0:15,0:12:13.53:0,14,153	0/0:49,0:2:6.01:0,6,68	0/0:49,0:1:0:0,0,0	1/1:26,6:35:6.08:59,6,0	0/1:16,3:16:62:62,0,106	0/1:37,0:34:99:102,0,167	0/1:55,2:35:29.19:29,0,641	0/1:48,0:41:58.91:59,0,456	0/1:70,0:62:14.07:14,0,1273	0/0:33,0:30:31.04:0,31,499	0/1:45,1:39:75.34:75,0,293	0/1:37,0:32:1.38:1,0,383	0/1:52,0:41:99:118,0,402	0/1:40,0:32:92.82:93,0,311	0/1:56,0:52:2.49:2,0,765	0/1:31,0:26:24.66:25,0,447	0/1:25,0:18:50.69:51,0,318	0/0:34,0:15:28.32:0,28,334	0/0:45,0:39:5.36:0,5,263	0/0:98,2:86:55.14:0,55,702	0/0:42,0:42:40.17:0,40,473	0/0:37,0:33:18.97:0,19,250	0/1:51,0:45:0.50:0,0,201	0/1:23,3:24:13.55:65,0,14	0/0:58,0:52:12.25:0,12,841	0/0:27,0:24:27.67:0,28,308	0/0:20,0:20:2.83:0,3,386
chr10	110594495	.	GA	G	3389.68	PASS	AB=0.753;AC=21;AF=0.375;AN=56;BaseQRankSum=14.665;DP=993;FS=215.415;HRun=1;HaplotypeScore=366.9633;InbreedingCoeff=-0.6313;MQ=32.63;MQ0=76;MQRankSum=-12.426;QD=5.28;ReadPosRankSum=-4.189;VQSLOD=-0.6757;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,6:26:26.13:26,0,120	0/1:7,5:11:5.09:5,0,195	0/0:62,5:3:5.75:0,6,59	0/0:52,3:2:2.97:0,3,20	0/1:18,12:29:22.59:34,0,23	0/1:6,11:15:12.09:285,0,12	0/1:17,11:24:99:116,0,115	0/1:39,5:25:53.11:53,0,646	0/1:24,10:35:99:182,0,437	0/1:37,15:49:99:236,0,1197	0/0:21,6:27:34.75:0,35,686	0/1:20,12:33:99:226,0,244	0/1:17,6:24:66.72:67,0,472	0/1:21,10:33:99:274,0,268	0/1:19,8:27:94.05:94,0,324	0/1:31,13:43:99:321,0,589	0/1:13,9:23:99:178,0,324	0/1:11,7:15:99:213,0,201	0/1:14,5:12:99:171,0,154	0/0:24,10:30:7.96:0,8,298	0/0:72,10:76:75.66:0,76,1148	0/1:24,9:35:55.07:55,0,481	0/0:20,13:30:14.12:0,14,341	0/0:39,3:41:0.22:0,0,340	0/1:9,11:18:10.99:68,0,11	0/1:32,16:44:99:363,0,666	0/1:6,15:21:99:322,0,136	0/1:14,4:19:99:103,0,354
chr10	110594504	.	A	ATG	8151.50	PASS	AB=0.949;AC=38;AF=0.679;AN=56;BaseQRankSum=-2.025;DP=973;FS=51.938;HRun=0;HaplotypeScore=350.3811;InbreedingCoeff=0.4564;MQ=34.27;MQ0=81;MQRankSum=0.981;QD=11.34;ReadPosRankSum=-1.458;VQSLOD=3.1612;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,11:30:14.33:243,14,0	0/0:12,0:11:18.61:0,19,224	0/0:68,0:4:2.93:0,3,19	0/0:53,0:2:3.01:0,3,37	0/1:28,0:27:0.01:0,0,0	0/1:16,0:14:19.53:46,0,20	0/1:32,0:27:12.79:13,0,21	1/1:45,7:25:28.14:455,28,0	1/1:23,12:33:36.75:636,37,0	0/0:54,0:49:22.68:0,23,706	0/0:27,0:27:45.09:0,45,537	1/1:24,7:28:20.06:229,20,0	1/1:18,11:27:33.86:695,34,0	0/1:26,9:30:7.64:380,0,8	1/1:21,10:26:20.83:348,21,0	0/0:38,0:36:22.76:0,23,354	1/1:14,7:21:17.08:381,17,0	1/1:16,3:17:4.06:179,4,0	0/1:17,0:8:34.15:90,0,34	1/1:20,12:29:23.47:414,23,0	1/1:45,49:86:55.04:1334,55,0	1/1:24,12:35:27.31:418,27,0	1/1:23,10:30:30.08:481,30,0	1/1:20,26:42:34.36:514,34,0	1/1:19,0:15:4.94:19,5,0	1/1:28,16:40:12.51:753,13,0	0/1:16,2:17:6.67:208,0,7	1/1:9,8:17:2.74:315,3,0
chr10	110594539	.	G	GGT	2862.91	PASS	AB=0.975;AC=24;AF=0.444;AN=54;BaseQRankSum=4.529;DP=996;FS=4.128;HRun=0;HaplotypeScore=301.7026;InbreedingCoeff=0.5517;MQ=37.31;MQ0=118;MQRankSum=0.291;QD=4.79;ReadPosRankSum=-1.297;VQSLOD=2.4665;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:38:5.42:156,5,0	0/0:10,0:10:18.05:0,18,220	0/1:43,0:2:0:0,0,0	./.	0/0:14,11:25:0.70:0,1,2	1/1:7,4:13:17.37:240,17,0	1/1:15,13:29:20.63:232,21,0	0/1:69,1:35:49.46:109,0,49	1/1:32,0:30:32.21:248,32,0	0/0:37,0:35:66.82:0,67,864	0/0:21,0:21:38.93:0,39,432	0/0:32,0:30:36.07:0,36,331	0/0:31,0:31:53.49:0,53,578	0/0:25,0:25:35.85:0,36,368	0/0:22,0:15:20.57:0,21,202	0/0:27,0:27:2.38:0,2,311	0/1:25,0:24:3.02:117,0,3	0/1:21,0:20:50.65:186,0,51	1/1:36,0:12:23.31:173,23,0	0/1:30,0:27:4.61:152,0,5	1/1:130,1:113:99:817,117,0	0/0:31,0:28:43.44:0,43,505	0/0:31,0:28:57.17:0,57,689	0/0:50,0:48:35.83:0,36,589	1/1:22,12:31:5.39:208,5,0	0/1:52,0:45:45.62:243,0,46	1/1:13,0:13:12.50:100,12,0	1/1:12,0:12:17.36:71,17,0
chr10	110594554	.	GGT	G	958.27	PASS	AB=0.997;AC=15;AF=0.278;AN=54;BaseQRankSum=3.656;DP=1028;FS=51.782;HRun=0;HaplotypeScore=290.2557;InbreedingCoeff=-0.0776;MQ=37.15;MQ0=122;MQRankSum=0.173;QD=1.67;ReadPosRankSum=-1.317;VQSLOD=0.3870;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:46,1:43:58.77:102,0,59	0/0:14,0:14:30.02:0,30,457	./.	0/0:62,0:1:2.88:0,3,15	1/1:25,0:24:1.06:2,1,0	0/0:14,0:14:20.94:0,21,261	0/0:30,0:27:13.38:0,13,205	0/1:79,0:40:99:101,0,544	0/1:33,0:28:7.61:14,0,8	0/0:39,0:35:81.95:0,82,1230	0/0:22,1:22:3.53:0,4,562	0/1:36,0:30:41.34:41,0,440	0/1:27,0:26:4.25:4,0,611	0/0:24,0:22:20.81:0,21,310	0/0:21,0:13:5.77:0,6,100	0/0:24,0:22:22.91:0,23,580	0/1:26,0:22:17.48:54,0,17	0/1:22,0:19:41.69:49,0,42	0/1:33,0:13:35.63:41,0,36	0/1:29,0:25:45.23:64,0,45	1/1:132,1:113:21.21:280,21,0	0/0:29,0:27:38.75:0,39,648	0/0:31,0:28:57.18:0,57,905	0/0:54,0:52:42.97:0,43,747	0/0:37,0:34:1.11:0,1,383	0/1:64,1:50:38.01:322,0,38	0/1:15,0:13:2.21:31,0,2	0/0:11,0:10:1.22:0,1,11
chr10	110594623	.	ATGTG	A	7584.83	PASS	AB=0.792;AC=31;AF=0.554;AN=56;BaseQRankSum=0.949;DP=944;FS=5.732;HRun=0;HaplotypeScore=226.5945;InbreedingCoeff=0.5583;MQ=36.48;MQ0=110;MQRankSum=2.067;QD=11.81;ReadPosRankSum=4.746;VQSLOD=3.7677;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,23:48:62.96:1015,63,0	0/0:15,0:12:18.06:0,18,443	0/0:40,0:5:6.02:0,6,147	0/0:50,0:6:9.03:0,9,146	0/0:18,0:19:5.81:0,6,42	0/0:15,0:15:8.72:0,9,72	0/0:13,1:17:8.45:0,8,52	0/1:80,9:55:52.41:488,0,52	1/1:16,12:22:22.80:395,23,0	0/0:57,0:44:80.68:0,81,1752	0/0:15,0:12:15.03:0,15,271	1/1:17,0:22:26.84:250,27,0	1/1:10,0:16:19.23:131,19,0	0/1:9,0:13:3.32:152,0,3	1/1:16,0:15:21.87:163,22,0	0/0:29,0:25:66.17:0,66,1441	1/1:15,16:28:45.97:877,46,0	1/1:17,18:30:38.61:829,39,0	0/1:34,4:16:40.17:178,0,40	1/1:19,8:21:20.81:308,21,0	1/1:62,32:79:51.51:1225,52,0	1/1:18,0:22:0.96:5,1,0	1/1:8,0:11:5.92:56,6,0	0/1:28,0:35:4.76:46,0,5	0/0:12,0:27:6.05:0,6,82	0/1:29,19:39:72.23:875,0,72	1/1:5,9:12:17.87:295,18,0	1/1:7,8:12:18.06:297,18,0
chr10	110595846	.	TAGAA	T	9226.16	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=16.418;DP=791;FS=1.839;HRun=0;HaplotypeScore=131.5171;InbreedingCoeff=0.9997;MQ=87.63;MQ0=0;MQRankSum=-6.857;QD=46.36;ReadPosRankSum=5.821;VQSLOD=5.4491;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,141,3832	0/0:12,0:12:36.12:0,36,988	0/0:29,0:29:81.28:0,81,2105	0/0:29,0:29:77.21:0,77,1943	0/0:30,0:30:84.23:0,84,2173	0/0:20,0:20:60.21:0,60,1609	0/0:25,0:25:75.26:0,75,2006	0/0:30,0:30:87.30:0,87,2378	0/0:34,0:34:99:0,99,2697	0/0:33,0:33:86.35:0,86,2309	0/0:20,0:20:57.20:0,57,1562	1/1:2,41:43:99:1939,102,0	1/1:1,33:34:93.32:1787,93,0	1/1:2,32:34:84.29:1628,84,0	1/1:3,25:28:63.22:1221,63,0	0/0:29,0:29:87.30:0,87,2379	0/0:43,0:43:99:0,126,3417	0/0:26,0:26:75.26:0,75,2055	0/0:20,0:20:57.20:0,57,1514	0/0:27,0:27:81.28:0,81,2210	0/0:39,0:39:99:0,117,3135	1/1:1,9:10:27.09:523,27,0	1/1:1,23:24:56.84:1084,57,0	1/1:1,25:26:52.89:1045,53,0	0/0:18,0:18:54.18:0,54,1395	0/0:32,0:32:96.33:0,96,2629	0/0:35,0:35:99:0,105,2839	0/0:11,0:11:33.11:0,33,903
chr10	110596388	.	TA	T	4376.51	PASS	AC=34;AF=0.630;AN=54;BaseQRankSum=3.850;DP=631;FS=2.802;HRun=13;HaplotypeScore=83.7145;InbreedingCoeff=0.9518;MQ=76.65;MQ0=1;MQRankSum=-0.672;QD=10.37;ReadPosRankSum=3.130;VQSLOD=4.7244;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,31:42:71.50:525,71,0	0/0:14,0:14:30.04:0,30,286	0/0:22,0:19:5.45:0,5,70	0/0:17,2:18:11.05:0,11,77	0/0:4,0:26:69.19:0,69,402	0/0:5,0:19:31.58:0,32,186	0/0:2,0:20:37.20:0,37,201	1/1:5,19:26:60.68:424,61,0	1/1:5,11:16:26.84:197,27,0	0/0:27,1:28:31.80:0,32,446	0/0:14,0:14:27.04:0,27,262	1/1:2,0:25:40.73:118,41,0	1/1:5,0:21:30.53:88,31,0	1/1:3,0:17:26.46:76,26,0	1/1:3,1:30:45.52:145,46,0	0/0:24,2:26:28.25:0,28,577	1/1:3,38:43:93.54:668,94,0	1/1:4,16:21:40.75:287,41,0	1/1:6,11:17:6.60:210,7,0	1/1:5,21:27:49.36:348,49,0	1/1:3,15:20:30.02:299,30,0	1/1:5,1:17:21.28:75,21,0	1/1:9,0:15:10.14:29,10,0	1/1:1,0:22:41.65:130,42,0	0/0:4,0:20:22.81:0,23,117	1/1:12,17:29:21.22:311,21,0	1/1:8,24:33:19.08:445,19,0	./.
chr10	110598128	.	A	AT	18673.63	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-13.185;DP=739;FS=4.653;HRun=6;HaplotypeScore=62.3126;InbreedingCoeff=0.9994;MQ=74.25;MQ0=0;MQRankSum=-0.739;QD=30.71;ReadPosRankSum=2.471;VQSLOD=5.6506;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,37:43:93.30:1170,93,0	0/0:10,0:10:24.05:0,24,245	0/0:25,0:25:49.74:0,50,521	0/0:15,0:15:29.26:0,29,269	1/1:0,24:24:72.23:897,72,0	1/1:0,30:30:75.24:944,75,0	1/1:1,19:20:39.12:491,39,0	1/1:5,40:45:99:1457,117,0	1/1:1,25:26:66.21:830,66,0	0/0:33,0:33:96.22:0,96,979	0/0:21,0:21:63.14:0,63,639	1/1:3,17:20:51.16:641,51,0	1/1:1,33:34:93.30:1170,93,0	1/1:2,29:31:75.24:944,75,0	1/1:4,26:30:69.22:868,69,0	0/0:27,0:27:63.14:0,63,643	1/1:7,21:28:48.15:604,48,0	1/1:2,18:20:56.54:688,57,0	1/1:4,23:27:69.21:855,69,0	1/1:2,27:29:81.26:1019,81,0	1/1:0,26:26:60.19:755,60,0	1/1:1,23:24:60.15:737,60,0	1/1:1,24:25:66.19:831,66,0	1/1:2,22:24:60.19:755,60,0	1/1:1,31:32:81.26:1019,81,0	1/1:2,20:22:57.18:717,57,0	1/1:6,25:31:63.20:793,63,0	1/1:4,13:17:39.12:491,39,0
chr10	110599050	.	GT	G	5255.95	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.604;DP=672;FS=15.359;HRun=6;HaplotypeScore=65.8239;InbreedingCoeff=0.9944;MQ=73.63;MQ0=0;MQRankSum=-1.457;QD=30.38;ReadPosRankSum=3.683;VQSLOD=3.9515;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,1838	0/0:14,0:14:39.12:0,39,500	0/0:18,0:18:47.06:0,47,539	0/0:25,0:25:60:0,60,699	0/0:33,0:33:99:0,99,1287	0/0:17,0:17:45.13:0,45,576	0/0:19,0:19:57.17:0,57,735	0/0:42,0:42:99:0,114,1486	0/0:20,0:20:60.20:0,60,790	0/0:28,0:28:81.26:0,81,1066	0/0:21,0:21:51.17:0,51,668	1/1:1,24:25:69.17:742,69,0	1/1:1,18:19:51.13:548,51,0	1/1:2,26:28:78.19:838,78,0	1/1:1,30:31:90.22:967,90,0	0/0:26,0:26:78.24:0,78,1011	0/0:24,0:24:72.20:0,72,917	0/0:17,0:17:48.16:0,48,630	0/0:25,0:25:66.67:0,67,853	0/0:21,0:21:63.20:0,63,829	0/0:18,0:18:48.16:0,48,631	1/1:0,18:18:54.14:580,54,0	1/1:0,20:20:60.15:645,60,0	1/1:1,31:32:87.22:935,87,0	0/0:22,0:22:63.20:0,63,829	0/0:23,0:23:66.20:0,66,849	0/0:31,0:31:87.28:0,87,1144	0/0:6,0:6:12.01:0,12,143
chr10	110600251	.	C	CT	1124.80	PASS	AB=0.630;AC=5;AF=0.114;AN=44;BaseQRankSum=-5.795;DP=438;FS=4.587;HRun=10;HaplotypeScore=64.0006;InbreedingCoeff=0.2362;MQ=60.19;MQ0=10;MQRankSum=0.246;QD=12.93;ReadPosRankSum=2.523;VQSLOD=3.6083;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:45:99:0,114,899	0/0:5,0:5:14.98:0,15,123	0/0:13,0:6:2.99:0,3,25	0/0:11,0:8:3.51:0,4,38	0/1:15,12:26:10.20:300,0,10	0/1:7,16:23:25.81:354,0,26	0/1:6,11:17:10.54:284,0,11	0/0:27,2:29:1.81:0,2,408	0/0:17,0:17:23.84:0,24,196	0/0:14,0:13:23.96:0,24,197	0/0:14,0:15:25.99:0,26,203	0/0:0,0:1:1.82:0,2,5	./.	./.	./.	0/0:19,0:22:51.04:0,51,386	0/0:39,0:40:99:0,110,887	0/0:21,0:22:43.92:0,44,348	0/0:7,0:7:8.01:0,8,55	0/0:21,0:22:46.47:0,46,357	0/0:27,0:26:37.84:0,38,290	./.	./.	./.	1/1:8,12:20:10.65:299,11,0	0/0:17,0:18:40.96:0,41,323	0/0:29,0:29:68.88:0,69,565	0/0:10,0:10:23.97:0,24,197
chr10	110600375	.	CA	C	4236.98	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=16.827;DP=596;FS=3.186;HRun=5;HaplotypeScore=93.8616;InbreedingCoeff=0.9966;MQ=82.61;MQ0=0;MQRankSum=-16.369;QD=32.10;ReadPosRankSum=3.754;VQSLOD=5.1653;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,1357	0/0:9,0:9:27.09:0,27,369	0/0:28,0:28:72.58:0,73,1046	0/0:12,0:12:32.90:0,33,415	0/0:27,0:27:78.26:0,78,1067	0/0:17,0:17:48.16:0,48,655	0/0:22,0:22:63.21:0,63,853	0/0:32,0:32:84.26:0,84,1119	0/0:13,0:13:39.13:0,39,533	0/0:28,0:28:75.25:0,75,1025	0/0:27,0:27:81.27:0,81,1104	1/1:0,24:24:72.20:811,72,0	1/1:0,10:10:27.08:305,27,0	1/1:0,23:23:69.20:781,69,0	1/1:1,22:23:66.19:748,66,0	0/0:15,0:15:45.15:0,45,616	0/0:19,0:19:54.13:0,54,688	0/0:21,0:21:54.18:0,54,734	0/0:23,0:23:63.21:0,63,855	0/0:30,0:30:84.27:0,84,1125	0/0:17,0:17:48.16:0,48,651	1/1:0,23:23:69.20:780,69,0	1/1:0,20:20:57.16:645,57,0	1/1:2,7:9:14.96:167,15,0	0/0:21,0:21:63.21:0,63,860	0/0:32,0:32:96.30:0,96,1278	0/0:22,0:22:63.18:0,63,827	0/0:12,0:12:36.12:0,36,488
chr10	110600406	.	A	AGGGT	12437.20	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.524;DP=661;FS=1.961;HRun=0;HaplotypeScore=134.1581;InbreedingCoeff=0.9996;MQ=80.88;MQ0=0;MQRankSum=-15.819;QD=68.71;ReadPosRankSum=-1.640;VQSLOD=6.3973;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1904	0/0:8,0:8:24.08:0,24,465	0/0:20,0:20:53.38:0,53,951	0/0:22,0:22:63.20:0,63,1126	0/0:30,0:30:90.29:0,90,1706	0/0:18,0:18:54.17:0,54,990	0/0:24,0:24:66.23:0,66,1280	0/0:26,0:26:75.22:0,75,1371	0/0:20,0:20:60.21:0,60,1163	0/0:26,0:26:78.27:0,78,1499	0/0:25,0:25:75.26:0,75,1454	1/1:5,26:31:90.18:2318,90,0	1/1:6,11:19:51.13:1271,51,0	1/1:9,26:36:99:2606,99,0	1/1:5,20:28:69.24:1778,69,0	0/0:17,0:17:51.17:0,51,989	0/0:17,0:17:42.14:0,42,798	0/0:23,0:23:66.23:0,66,1279	0/0:23,0:23:63.18:0,63,1125	0/0:31,0:31:90.31:0,90,1743	0/0:26,0:26:78.27:0,78,1503	1/1:6,17:24:63.17:1624,63,0	1/1:2,21:23:69.24:1838,69,0	1/1:4,14:20:39.08:1002,39,0	0/0:29,0:29:81.27:0,81,1537	0/0:31,0:31:84.29:0,84,1629	0/0:19,0:19:54.19:0,54,1045	0/0:11,0:11:33.11:0,33,626
chr10	110601142	.	G	GCTT	1840.96	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=0.599;DP=444;FS=13.829;HRun=0;HaplotypeScore=84.9103;InbreedingCoeff=0.5951;MQ=67.12;MQ0=9;MQRankSum=0.450;QD=7.16;ReadPosRankSum=0.128;VQSLOD=1.6439;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:27,2:29:26.84:234,27,0	0/0:7,0:7:9.01:0,9,92	0/1:21,0:14:13.22:13,0,203	0/0:17,0:5:2.62:0,3,57	0/0:11,0:11:10.71:0,11,99	0/0:9,0:9:0.53:0,1,97	0/0:14,0:14:3.80:0,4,174	1/1:27,0:27:43.72:345,44,0	1/1:13,0:13:7.19:78,7,0	0/0:17,0:16:29.65:0,30,315	0/0:8,0:8:15.04:0,15,180	0/0:15,0:14:1.58:0,2,85	0/0:10,0:10:1.26:0,1,68	0/0:14,0:14:0.44:0,0,45	0/0:12,0:12:10.71:0,11,93	0/0:15,0:14:20.95:0,21,193	1/1:10,15:24:7.34:93,7,0	1/1:20,1:21:15.03:182,15,0	1/1:24,0:23:33:388,33,0	1/1:5,15:20:35.35:256,35,0	1/1:15,0:14:2.98:32,3,0	0/1:12,0:12:1.65:2,0,118	0/0:12,0:11:17:0,17,161	0/0:8,0:8:16.03:0,16,122	0/0:18,0:18:1.33:0,1,111	1/1:16,0:16:24.42:246,24,0	1/1:23,0:22:10.57:79,11,0	1/1:11,0:10:8.98:81,9,0
chr10	110601147	.	T	TTC	1738.59	PASS	AB=0.868;AC=20;AF=0.357;AN=56;BaseQRankSum=-1.923;DP=582;FS=70.246;HRun=0;HaplotypeScore=111.4696;InbreedingCoeff=0.6191;MQ=55.27;MQ0=27;MQRankSum=3.631;QD=5.57;ReadPosRankSum=5.634;VQSLOD=-0.0906;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,16:34:8.67:240,9,0	0/0:5,0:5:9.48:0,9,88	0/1:18,0:12:0.64:1,0,204	0/0:16,0:4:2.62:0,3,57	0/0:20,0:18:21.52:0,22,145	0/0:16,0:16:30.35:0,30,216	0/0:16,0:16:20.10:0,20,191	1/1:34,0:34:9.62:289,10,0	1/1:22,0:21:9.89:96,10,0	0/0:24,0:22:45.17:0,45,397	0/0:9,0:9:15.04:0,15,183	0/0:22,0:20:27.10:0,27,183	0/0:15,0:15:16.27:0,16,121	0/0:17,0:16:17.28:0,17,123	0/0:16,0:16:9.38:0,9,81	0/0:18,0:15:29.70:0,30,237	1/1:29,1:29:9.40:87,9,0	0/1:6,15:19:1.63:169,0,2	0/1:35,0:33:45.57:336,0,46	1/1:23,0:23:20.40:219,20,0	1/1:12,10:21:1.91:40,2,0	0/0:17,0:17:9.56:0,10,173	0/0:17,0:16:25.24:0,25,197	0/0:17,0:13:23.49:0,23,170	0/0:25,0:24:56.08:0,56,325	1/1:12,13:24:27.48:260,27,0	0/1:28,2:29:20.34:75,0,20	1/1:6,8:12:6.83:115,7,0
chr10	110601148	.	T	TC	1322.15	PASS	AB=0.861;AC=13;AF=0.232;AN=56;BaseQRankSum=-2.962;DP=577;FS=58.796;HRun=0;HaplotypeScore=103.7481;InbreedingCoeff=0.0353;MQ=53.25;MQ0=34;MQRankSum=6.393;QD=4.57;ReadPosRankSum=6.319;VQSLOD=1.0215;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,4:32:11.32:192,11,0	0/0:5,0:5:9.90:0,10,86	0/0:18,0:11:1.05:0,1,202	0/0:16,0:4:2.62:0,3,57	0/0:21,0:18:31.43:0,31,205	0/0:16,0:16:37.77:0,38,258	0/0:16,0:16:24.20:0,24,191	0/1:17,18:35:59.07:268,0,59	0/1:14,8:21:39.67:44,0,40	0/0:24,0:22:52.27:0,52,461	0/0:9,0:8:20.88:0,21,202	0/0:22,0:20:46.04:0,46,284	0/0:14,0:14:27.04:0,27,168	0/0:18,0:16:31.30:0,31,189	0/0:16,0:16:15.26:0,15,87	0/0:17,0:14:29.82:0,30,244	0/1:27,2:28:18.36:64,0,18	0/1:20,0:18:5.57:101,0,6	0/1:22,14:33:54.42:331,0,54	1/1:23,1:23:0.44:175,0,0	0/1:20,0:19:14.20:14,0,15	0/0:16,0:16:40.71:0,41,271	0/0:17,0:16:40.31:0,40,272	0/0:18,0:13:26.49:0,26,195	0/0:25,0:24:59.68:0,60,401	0/1:27,0:25:7.44:156,0,7	0/1:17,13:29:31.07:86,0,31	0/1:11,0:9:23.53:44,0,24
chr10	110602401	.	ATTTC	A	3485.83	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=4.458;DP=653;FS=16.417;HRun=0;HaplotypeScore=170.8620;InbreedingCoeff=0.3820;MQ=75.27;MQ0=5;MQRankSum=1.056;QD=10.41;ReadPosRankSum=6.866;VQSLOD=1.3567;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:59.44:0,59,469	0/0:12,0:12:30.09:0,30,725	0/0:34,0:29:81.05:0,81,863	0/0:34,0:30:74.18:0,74,911	0/0:22,0:22:37.37:0,37,286	0/0:13,0:12:36.10:0,36,262	0/0:20,0:20:46.98:0,47,317	0/0:29,0:28:42.96:0,43,637	0/1:29,0:29:99:170,0,264	0/0:30,0:30:71.49:0,71,1858	0/0:17,0:17:48.12:0,48,967	1/1:31,0:31:71.63:638,72,0	1/1:25,0:25:47.71:429,48,0	1/1:26,0:26:47.89:386,48,0	1/1:36,0:36:80.83:697,81,0	0/0:38,0:38:99:0,111,2560	0/1:15,0:15:19.82:20,0,173	0/1:16,0:16:95.97:96,0,150	0/1:22,0:22:17.61:18,0,351	0/0:17,0:17:49.40:0,49,395	0/1:40,0:40:70.03:70,0,491	1/1:13,0:13:20.83:171,21,0	0/0:0,6:6:0:0,0,0	1/1:24,0:24:23.74:204,24,0	0/0:12,0:12:29.80:0,30,261	0/1:32,0:32:99:299,0,340	0/1:19,0:19:99:196,0,165	0/1:7,0:7:6.18:93,0,6
chr10	110602403	.	TTCTG	T	3504.48	PASS	AB=0.894;AC=29;AF=0.580;AN=50;BaseQRankSum=7.373;DP=639;FS=19.142;HRun=0;HaplotypeScore=168.2814;InbreedingCoeff=0.4556;MQ=73.63;MQ0=5;MQRankSum=-0.033;QD=8.65;ReadPosRankSum=3.684;VQSLOD=1.8529;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:10,0:10:24.08:0,24,564	0/0:32,0:27:5.74:0,6,30	0/0:33,0:29:8.14:0,8,135	0/0:7,0:22:0:0,0,0	0/1:12,0:12:9.07:40,0,9	0/1:19,0:19:4.06:49,0,4	0/1:28,0:27:4.39:113,0,4	1/1:21,8:29:45.11:635,45,0	0/0:30,1:31:18.87:0,19,1338	0/0:17,0:17:33.08:0,33,602	1/1:31,0:31:8.98:72,9,0	1/1:24,0:24:7.86:65,8,0	0/1:26,0:26:0:0,0,0	1/1:36,0:36:5.93:47,6,0	0/0:37,0:37:84.29:0,84,1949	1/1:8,7:15:6.02:95,6,0	1/1:13,3:16:24.07:356,24,0	1/1:18,4:22:17.23:217,17,0	0/1:10,7:17:0:0,0,0	1/1:21,18:39:20.88:331,21,0	./.	./.	1/1:23,0:23:3:25,3,0	0/1:11,0:11:6.47:6,0,15	0/1:12,19:31:38.47:763,0,38	1/1:9,10:19:30.10:462,30,0	1/1:1,5:6:15.05:227,15,0
chr10	110602437	.	CTGTCTCTCTG	C	5054.96	PASS	AB=1.000;AC=29;AF=0.580;AN=50;BaseQRankSum=7.892;DP=508;FS=15.673;HRun=0;HaplotypeScore=167.0709;InbreedingCoeff=0.5160;MQ=45.63;MQ0=10;MQRankSum=-2.303;QD=15.80;ReadPosRankSum=-2.567;VQSLOD=2.7916;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:11,0:11:33.11:0,33,1136	0/0:4,0:2:5.74:0,6,30	0/0:10,0:7:8.14:0,8,134	0/0:19,0:18:0:0,0,0	0/1:20,0:19:6.47:58,0,6	0/1:23,0:23:3.21:50,0,3	1/1:39,0:30:37.30:431,37,0	1/1:30,0:30:50.05:817,50,0	0/0:36,0:36:99:0,102,2686	0/0:21,0:21:54.15:0,54,1182	1/1:10,0:10:8.98:72,9,0	1/1:18,0:17:8.74:66,9,0	0/1:9,0:9:0:0,0,0	1/1:14,0:14:5.93:47,6,0	0/0:37,0:37:99:0,106,3724	1/1:10,0:10:9.03:185,9,0	1/1:17,0:16:33.10:556,33,0	1/1:19,0:16:25.66:316,26,0	0/0:13,0:12:0.89:0,1,3	1/1:28,0:25:20.60:331,21,0	./.	./.	1/1:17,0:17:3:25,3,0	0/1:11,0:11:15.24:31,0,15	0/1:27,0:26:48.58:1008,0,49	1/1:21,0:21:39.13:705,39,0	1/1:7,0:7:18.06:357,18,0
chr10	110602439	.	GTC	G	424.06	PASS	AB=0.902;AC=18;AF=0.391;AN=46;BaseQRankSum=9.572;DP=501;FS=8.088;HRun=0;HaplotypeScore=135.9265;InbreedingCoeff=0.4346;MQ=45.40;MQ0=11;MQRankSum=0.460;QD=2.04;ReadPosRankSum=0.088;VQSLOD=1.6938;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:12,0:12:33.11:0,33,567	./.	./.	0/0:19,0:18:0:0,0,0	0/1:11,8:18:2.15:112,0,2	1/1:13,9:22:12.04:163,12,0	0/0:39,0:30:69.85:0,70,649	1/1:30,0:30:16.40:67,16,0	0/0:37,0:37:99:0,101,1523	0/0:20,0:20:48.08:0,48,720	0/0:10,0:10:0.89:0,1,3	0/0:17,0:16:3.87:0,4,24	0/0:9,0:9:2.99:0,3,24	0/0:13,0:13:4.24:0,4,27	0/0:39,1:40:99:0,114,1831	1/1:10,0:10:4.37:13,4,0	1/1:16,0:15:12.86:49,13,0	0/1:17,2:16:49.82:50,0,265	0/0:13,0:12:0:0,0,0	1/1:28,0:24:3.19:10,3,0	./.	./.	0/0:17,0:17:0:0,0,0	1/1:4,5:9:2.88:41,3,0	0/1:27,0:26:6.07:6,0,75	1/1:21,0:21:16.58:53,17,0	0/1:7,0:7:6.04:6,0,9
chr10	110602441	.	C	CTG	955.17	PASS	AB=1.000;AC=15;AF=0.313;AN=48;BaseQRankSum=7.007;DP=506;FS=26.814;HRun=0;HaplotypeScore=137.0331;InbreedingCoeff=0.4614;MQ=45.10;MQ0=12;MQRankSum=1.298;QD=5.00;ReadPosRankSum=-1.123;VQSLOD=1.4770;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:12,0:12:33.11:0,33,503	./.	0/0:5,0:3:3.01:0,3,41	0/1:19,0:18:0:0,0,0	0/0:20,0:19:8.33:0,8,32	0/0:21,0:22:7.45:0,7,21	0/0:42,0:33:14.18:0,14,390	1/1:24,4:28:30.53:253,31,0	0/0:40,0:40:99:0,108,1484	0/0:20,0:20:48:0,48,677	0/0:9,0:9:0.89:0,1,2	0/0:16,0:15:7.76:0,8,52	0/0:9,0:9:3:0,3,25	0/0:13,0:13:9.87:0,10,74	0/0:41,0:41:99:0,117,1675	1/1:10,0:10:5.60:37,6,0	1/1:14,2:15:23.12:132,23,0	0/1:19,0:16:22.86:23,0,174	0/1:15,0:13:0:1,0,0	1/1:28,0:24:20.88:157,21,0	./.	./.	0/0:17,0:17:0:0,0,0	0/0:9,0:9:1.72:0,2,5	0/1:27,0:26:44.32:235,0,44	1/1:20,1:21:35.37:217,35,0	0/1:8,0:7:16.75:53,0,17
chr10	110602459	.	GTCTCTGTCTCTCTC	G	2544.23	PASS	AB=0.663;AC=28;AF=0.609;AN=46;BaseQRankSum=9.101;DP=456;FS=2.751;HRun=0;HaplotypeScore=177.9877;InbreedingCoeff=0.4941;MQ=41.39;MQ0=14;MQRankSum=-4.362;QD=9.90;ReadPosRankSum=-2.905;VQSLOD=2.1030;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:1.71:0,2,4	0/0:12,0:12:27.05:0,27,1095	./.	./.	1/1:13,0:15:0.59:2,1,0	0/1:14,8:23:34.39:83,0,34	0/0:8,0:18:0.47:0,0,1	1/1:12,19:22:38.66:361,39,0	1/1:12,2:29:15.32:292,15,0	0/0:34,0:34:90.07:0,90,3534	0/0:21,0:21:30.08:0,30,1216	1/1:9,0:10:2.66:16,3,0	1/1:4,0:3:2.68:11,3,0	1/1:8,0:8:5.56:33,6,0	0/0:13,0:13:2.97:0,3,21	0/0:40,0:39:99:0,108,4775	1/1:15,0:16:6.39:90,6,0	0/1:7,0:18:53.98:213,0,54	1/1:10,0:8:16.82:272,17,0	0/0:10,2:11:1.36:0,1,3	1/1:22,1:20:2.28:11,2,0	./.	./.	./.	1/1:12,0:10:2.30:9,2,0	1/1:20,1:23:13.96:699,14,0	1/1:8,2:22:29.72:332,30,0	1/1:6,3:8:15.95:271,16,0
chr10	110602461	.	C	CTG	101.28	PASS	AB=0.981;AC=9;AF=0.196;AN=46;BaseQRankSum=4.338;DP=482;FS=15.155;HRun=0;HaplotypeScore=158.5544;InbreedingCoeff=0.5731;MQ=40.57;MQ0=14;MQRankSum=-4.321;QD=1.00;ReadPosRankSum=-4.576;VQSLOD=-0.3002;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:33:0:0,0,0	0/0:11,0:11:30.09:0,30,438	./.	./.	0/0:17,0:16:2.72:0,3,46	0/0:24,0:23:6.33:0,6,59	0/0:18,0:18:2.93:0,3,18	0/0:30,0:21:50.67:0,51,436	0/0:29,0:29:24.86:0,25,208	0/0:33,0:33:90.29:0,90,1340	0/0:21,0:21:32.97:0,33,484	1/1:13,1:14:9.90:113,10,0	1/1:9,0:8:2.80:13,3,0	1/1:10,1:11:6.01:82,6,0	0/1:16,1:17:0.01:0,0,0	0/0:40,0:39:99:0,111,1667	0/0:19,0:19:3.56:0,4,108	0/0:19,0:19:14.78:0,15,159	0/0:11,0:9:17.89:0,18,212	0/1:14,0:12:0:1,0,0	0/0:24,0:19:8.81:0,9,94	./.	./.	./.	0/0:13,0:11:2.89:0,3,23	0/0:22,0:22:41.35:0,41,479	0/0:24,0:24:32.37:0,32,206	0/0:9,0:8:14.96:0,15,144
chr10	110602465	.	GTC	G	561.65	PASS	AB=0.974;AC=18;AF=0.375;AN=48;BaseQRankSum=5.844;DP=460;FS=5.765;HRun=0;HaplotypeScore=135.9073;InbreedingCoeff=0.0484;MQ=40.00;MQ0=14;MQRankSum=-3.548;QD=2.10;ReadPosRankSum=0.061;VQSLOD=2.3161;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,3:31:0.47:0,0,1	0/1:10,0:10:5.68:6,0,125	./.	./.	0/0:16,0:15:8.91:0,9,64	0/1:21,0:21:12.04:12,0,22	0/0:11,0:12:0:0,0,0	0/1:30,0:21:6.45:53,0,6	1/1:26,0:27:11.26:96,11,0	0/0:31,0:31:32.23:0,32,589	0/0:18,1:19:20.96:0,21,263	0/1:17,0:17:18.35:18,0,31	0/0:10,0:9:5.79:0,6,38	0/0:14,0:14:2.44:0,2,18	0/0:18,0:18:2.84:0,3,14	0/1:38,1:38:41.53:42,0,693	0/1:19,2:21:28.27:48,0,28	0/1:17,0:17:11.79:28,0,12	0/1:8,1:8:1.78:59,0,2	0/0:13,0:11:0:0,0,0	1/1:20,2:16:2.90:35,3,0	./.	0/1:4,0:3:0:0,0,0	./.	0/0:12,0:10:2.98:0,3,21	1/1:17,1:18:4.66:145,5,0	0/1:24,0:24:5.14:86,0,5	1/1:7,1:7:7.32:66,7,0
chr10	110602488	.	TCA	T	719.20	PASS	AB=0.963;AC=18;AF=0.321;AN=56;BaseQRankSum=1.664;DP=555;FS=8.021;HRun=0;HaplotypeScore=160.4334;InbreedingCoeff=0.5775;MQ=43.16;MQ0=9;MQRankSum=2.148;QD=3.60;ReadPosRankSum=0.357;VQSLOD=2.1605;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:17.92:0,18,139	0/0:9,0:9:8.91:0,9,85	1/1:2,0:1:2.04:6,2,0	0/0:8,0:2:5.98:0,6,47	0/0:17,0:17:18.01:0,18,203	0/0:28,0:27:11.92:0,12,115	0/0:28,0:28:35.38:0,35,261	0/0:26,0:24:32.24:0,32,207	0/1:25,0:25:10.02:10,0,108	0/0:27,0:28:29.81:0,30,372	0/0:17,0:17:20.96:0,21,260	1/1:31,1:32:15.62:199,16,0	0/1:13,1:13:10.19:49,0,10	1/1:17,2:20:10.48:127,10,0	1/1:28,2:30:24.66:256,25,0	0/1:31,3:33:23.55:24,0,509	0/0:23,0:23:23.79:0,24,307	0/0:19,0:19:27.86:0,28,210	0/0:18,0:14:16.42:0,16,126	0/0:16,0:15:14.49:0,14,122	0/0:25,0:22:13.39:0,13,154	1/1:7,0:7:11.66:83,12,0	1/1:7,0:6:2.99:24,3,0	1/1:19,3:22:14.72:121,15,0	0/0:18,0:16:14.71:0,15,128	0/0:18,0:18:16.05:0,16,208	0/0:22,0:22:8.12:0,8,133	0/1:7,0:7:2.25:2,0,41
chr10	110602911	.	TCTCTCTCTCTCA	T	221.51	PASS	AB=1.000;AC=5;AF=0.093;AN=54;BaseQRankSum=4.502;DP=354;FS=0.000;HRun=0;HaplotypeScore=132.7417;InbreedingCoeff=0.3590;MQ=38.82;MQ0=29;MQRankSum=-3.104;QD=5.15;ReadPosRankSum=-0.887;VQSLOD=2.3942;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:13:8.31:0,8,313	0/0:1,0:1:2.94:0,3,18	0/0:7,0:2:6:0,6,110	0/0:14,0:5:12:0,12,173	1/1:10,2:11:6.02:203,6,0	0/0:14,2:15:2.97:0,3,20	1/1:12,0:11:0.77:30,1,0	0/0:23,0:23:62.63:0,63,909	0/0:13,0:9:4.34:0,4,122	0/0:7,0:7:19.88:0,20,695	0/0:8,0:8:18.05:0,18,501	0/0:10,0:10:7.38:0,7,145	0/0:8,0:6:8.68:0,9,75	0/0:12,0:12:9.03:0,9,254	0/0:11,0:11:8.99:0,9,193	0/0:10,0:9:18.94:0,19,695	0/0:26,0:22:40.03:0,40,893	0/0:12,0:11:28.45:0,28,720	0/0:13,0:10:26.81:0,27,402	0/0:16,0:15:27.89:0,28,663	0/0:10,0:10:0.47:0,0,1	0/0:8,0:7:12.04:0,12,440	0/0:11,0:10:9.03:0,9,359	./.	0/1:19,0:18:46.76:93,0,47	0/0:16,0:16:20.02:0,20,838	0/0:24,0:23:14.95:0,15,922	0/0:11,0:7:10.28:0,10,342
chr10	110602913	.	TCTCTCTCTCA	T	304.97	PASS	AB=0.950;AC=10;AF=0.185;AN=54;BaseQRankSum=4.557;DP=345;FS=2.361;HRun=0;HaplotypeScore=124.1476;InbreedingCoeff=0.4476;MQ=38.62;MQ0=27;MQRankSum=-2.314;QD=3.21;ReadPosRankSum=-0.703;VQSLOD=2.2420;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:12:2.09:2,0,196	0/0:1,0:1:2.94:0,3,18	0/0:6,0:2:5.38:0,5,74	0/0:11,0:5:10.82:0,11,100	1/1:9,3:11:6.02:135,6,0	0/1:12,4:15:0:0,0,0	1/1:11,1:11:1.23:70,1,0	0/0:23,0:23:62.56:0,63,715	0/1:13,0:9:3.40:3,0,75	0/0:7,0:7:18.77:0,19,536	0/0:7,0:7:18.04:0,18,375	0/0:11,0:11:6.96:0,7,119	0/0:8,0:6:5.70:0,6,31	0/0:12,0:12:9.03:0,9,183	0/0:11,0:11:9.03:0,9,150	0/0:10,0:9:15.94:0,16,540	0/0:27,0:23:31.84:0,32,661	0/0:12,0:11:28.35:0,28,576	0/0:10,0:7:20.55:0,21,259	0/0:17,0:16:1.96:0,2,398	0/1:10,0:10:0:0,0,1	0/0:9,0:8:12.04:0,12,343	0/0:11,0:10:9.03:0,9,282	./.	1/1:11,7:17:10.69:211,11,0	0/0:15,0:15:19.99:0,20,586	0/0:23,0:22:14.92:0,15,717	0/0:10,0:7:10.28:0,10,267
chr10	110602956	.	CACACACACAAAAAAAAA	C	2943.68	PASS	AB=0.992;AC=17;AF=0.315;AN=54;BaseQRankSum=3.146;DP=398;FS=1.656;HRun=0;HaplotypeScore=131.7533;InbreedingCoeff=0.2879;MQ=40.60;MQ0=40;MQRankSum=-2.092;QD=16.35;ReadPosRankSum=4.642;VQSLOD=2.1949;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:16:5.71:0,6,141	0/0:2,0:2:6.02:0,6,320	0/0:16,0:6:13.79:0,14,594	0/0:23,0:8:15.88:0,16,349	0/0:19,0:17:5.32:0,5,13	0/0:17,0:16:4.07:0,4,12	0/1:17,0:14:22.34:24,0,22	0/1:13,0:11:43.80:358,0,44	1/1:18,0:16:9:239,9,0	0/0:8,0:6:14.98:0,15,319	0/0:5,0:5:12.04:0,12,510	0/0:13,0:13:0:0,0,0	0/0:10,0:7:2.92:0,3,17	0/0:14,0:14:2.92:0,3,8	0/0:21,0:18:3.06:0,3,8	0/0:9,0:7:12.93:0,13,545	0/1:24,0:20:14.56:243,0,15	1/1:9,2:10:12.04:473,12,0	1/1:8,0:8:17.80:391,18,0	1/1:17,1:18:1.34:49,1,0	0/0:13,0:11:0.94:0,1,3	0/0:11,0:10:7.27:0,7,141	0/0:9,0:9:9.02:0,9,156	./.	0/1:20,0:18:8.32:54,0,8	1/1:14,0:11:3.45:429,3,0	0/1:23,1:24:54.40:751,0,54	1/1:12,0:8:3.01:89,3,0
chr10	110602958	.	CACACACAAAAAAAAA	C	3733.48	PASS	AB=0.689;AC=18;AF=0.333;AN=54;BaseQRankSum=2.088;DP=383;FS=5.227;HRun=0;HaplotypeScore=115.2116;InbreedingCoeff=0.4455;MQ=41.20;MQ0=41;MQRankSum=-4.274;QD=21.83;ReadPosRankSum=4.597;VQSLOD=1.8611;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,10:15:5.30:0,5,122	0/0:3,0:2:6.02:0,6,295	0/0:16,0:6:13.79:0,14,590	0/0:24,0:9:18.90:0,19,432	0/0:17,0:15:3.56:0,4,11	0/0:16,0:15:4.07:0,4,12	0/1:17,0:14:4.95:24,0,5	1/1:13,0:11:23.91:458,24,0	1/1:3,13:14:9:360,9,0	0/0:9,0:7:17.93:0,18,362	0/0:5,0:5:12.04:0,12,430	0/0:13,0:13:0:0,0,0	0/0:10,0:7:2.88:0,3,15	0/0:13,0:13:2.04:0,2,6	0/0:20,0:17:1.25:0,1,3	0/0:9,0:7:12.93:0,13,506	0/1:9,14:19:10.15:259,0,10	1/1:3,7:9:12.04:504,12,0	1/1:7,0:7:15.47:378,15,0	0/1:4,12:16:0.65:34,0,1	0/0:11,0:9:0.47:0,0,1	0/0:11,0:10:7.25:0,7,99	0/0:8,0:8:8.99:0,9,129	./.	1/1:20,0:18:0.64:49,1,0	1/1:3,11:11:20.98:588,21,0	0/1:5,18:23:39.31:944,0,39	1/1:7,5:8:3.01:134,3,0
chr10	110602964	.	CAAAAAAAAAA	C	1817.17	PASS	AB=0.893;AC=18;AF=0.333;AN=54;BaseQRankSum=4.770;DP=368;FS=4.137;HRun=15;HaplotypeScore=97.3319;InbreedingCoeff=0.4040;MQ=43.24;MQ0=38;MQRankSum=-3.371;QD=11.57;ReadPosRankSum=6.233;VQSLOD=-0.4513;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:14:11.87:0,12,132	0/0:3,0:2:6.02:0,6,252	0/0:17,0:7:21.07:0,21,804	0/0:24,0:9:19.77:0,20,423	0/0:9,6:14:6.11:0,6,16	0/0:4,11:15:4.74:0,5,16	1/1:4,10:13:5.88:134,6,0	1/1:1,0:8:3.94:222,4,0	0/1:15,0:14:7.92:155,0,8	0/0:10,0:8:14.96:0,15,329	0/0:4,0:5:12.04:0,12,419	0/0:5,0:11:0:0,0,0	1/1:6,0:8:2.98:35,3,0	0/0:6,0:10:0:0,0,0	0/0:7,0:15:1.55:0,2,4	0/0:13,0:11:18.52:0,19,689	0/1:21,0:18:1.70:120,0,2	1/1:10,0:9:12.04:258,12,0	0/1:2,0:8:1.03:182,0,1	0/0:15,0:15:3.01:0,3,39	0/0:3,0:9:3.44:0,3,21	0/0:8,0:9:1.55:0,2,4	0/0:5,0:7:3:0,3,29	./.	1/1:9,11:18:0.32:79,0,0	0/1:13,0:10:16.61:240,0,17	1/1:20,0:21:24.05:479,24,0	1/1:12,0:8:3.01:65,3,0
chr10	110603169	.	A	AT	4592.33	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.301;DP=651;FS=4.259;HRun=8;HaplotypeScore=73.1888;InbreedingCoeff=0.9720;MQ=80.95;MQ0=0;MQRankSum=-1.041;QD=30.62;ReadPosRankSum=0.520;VQSLOD=4.4327;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,111,1010	0/0:9,0:9:26.99:0,27,241	0/0:29,0:29:41.09:0,41,452	0/0:17,0:17:40.25:0,40,319	0/0:38,0:38:99:0,108,982	0/0:20,0:20:51.02:0,51,467	0/0:17,0:17:19.30:0,19,334	0/0:25,0:25:66.02:0,66,600	0/0:17,0:17:48.03:0,48,439	0/0:29,0:28:69.03:0,69,631	0/0:26,0:26:63.02:0,63,572	1/1:1,23:24:44.75:768,45,0	1/1:1,23:24:69.20:796,69,0	1/1:1,18:19:54.09:605,54,0	1/1:2,30:32:84.25:969,84,0	0/0:31,0:31:81.01:0,81,737	0/0:18,0:18:54.03:0,54,494	0/0:11,0:11:23.98:0,24,213	0/0:23,0:23:57.02:0,57,518	0/0:32,0:32:87.04:0,87,796	0/0:18,0:18:54.02:0,54,489	1/1:1,12:13:33.10:381,33,0	1/1:0,17:17:51.15:589,51,0	1/1:4,16:21:4.28:484,4,0	0/0:26,0:26:59.97:0,60,540	0/0:21,0:21:63.03:0,63,576	0/0:28,0:27:84.05:0,84,768	0/0:24,0:24:63.78:0,64,600
chr10	110604881	.	AACACACAC	A	415.41	PASS	AB=0.881;AC=12;AF=0.250;AN=48;BaseQRankSum=2.057;DP=429;FS=1.487;HRun=0;HaplotypeScore=106.5063;InbreedingCoeff=0.4338;MQ=67.66;MQ0=14;MQRankSum=-4.146;QD=4.95;ReadPosRankSum=-0.214;VQSLOD=2.0914;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:18.06:0,18,618	./.	./.	./.	0/0:13,0:13:12.02:0,12,370	0/0:17,0:16:27.07:0,27,740	0/0:24,0:22:12.04:0,12,419	0/0:24,0:23:3.01:0,3,39	0/0:8,0:8:6.02:0,6,171	0/0:19,0:19:22.89:0,23,597	0/0:9,0:9:15.05:0,15,321	1/1:7,2:9:6.02:142,6,0	1/1:1,1:2:3.01:69,3,0	1/1:6,2:8:2.55:74,3,0	0/1:9,2:11:18.93:68,0,19	0/1:10,0:11:49.79:50,0,59	0/0:23,0:23:30.57:0,31,899	0/0:14,0:13:27.09:0,27,894	0/0:13,0:13:3.01:0,3,117	0/0:10,0:9:3.01:0,3,96	0/0:23,0:23:18.06:0,18,611	./.	1/1:11,2:12:3.01:74,3,0	1/1:23,7:28:3:74,3,0	0/0:10,0:10:18.06:0,18,500	0/0:21,0:21:22.50:0,23,569	0/0:12,0:12:15.05:0,15,401	0/0:3,0:5:9.03:0,9,321
chr10	110608950	.	AAC	A	1208.32	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.282;DP=669;FS=12.649;HRun=0;HaplotypeScore=93.1493;InbreedingCoeff=0.9687;MQ=82.34;MQ0=0;MQRankSum=-1.709;QD=8.39;ReadPosRankSum=0.910;VQSLOD=2.4111;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1894	0/0:10,0:10:30.10:0,30,508	0/0:21,0:21:51.63:0,52,654	0/0:22,0:21:52.72:0,53,628	0/0:28,0:28:78.17:0,78,1225	0/0:10,0:10:30.06:0,30,453	0/0:26,0:26:72.18:0,72,1156	0/0:29,0:29:81.20:0,81,1185	0/0:26,0:26:78.24:0,78,1260	0/0:29,0:29:84.09:0,84,1242	0/0:25,0:25:75.24:0,75,1227	1/1:19,3:22:8.81:209,9,0	1/1:27,0:27:50.35:208,50,0	1/1:22,0:22:6.10:103,6,0	1/1:19,0:19:32.70:225,33,0	0/0:34,0:33:98.65:0,99,1570	0/0:26,0:26:78.23:0,78,1239	0/0:23,0:23:66.18:0,66,1050	0/0:19,0:19:53.36:0,53,775	0/0:23,0:23:66.21:0,66,1075	0/0:26,0:26:72.18:0,72,1133	1/1:16,0:16:34.41:160,34,0	1/1:15,1:16:21.57:153,22,0	1/1:20,2:22:56.37:342,56,0	0/0:17,0:17:48.13:0,48,740	0/0:37,0:37:99:0,111,1779	0/0:39,0:39:99:0,117,1788	0/0:14,0:14:42.01:0,42,592
chr10	110608951	.	AC	A	4294.35	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.074;DP=666;FS=4.428;HRun=1;HaplotypeScore=68.7018;InbreedingCoeff=0.9831;MQ=81.93;MQ0=0;MQRankSum=-2.856;QD=29.82;ReadPosRankSum=0.574;VQSLOD=4.4819;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1513	0/0:10,0:10:30.10:0,30,398	0/0:21,0:21:6.68:0,7,481	0/0:20,0:20:47.80:0,48,480	0/0:28,0:28:78.12:0,78,967	0/0:10,0:10:30.06:0,30,365	0/0:25,0:25:75.19:0,75,935	0/0:29,0:29:87.05:0,87,1001	0/0:26,0:26:78.23:0,78,1000	0/0:29,0:29:86.95:0,87,1016	0/0:25,0:25:75.21:0,75,957	1/1:5,17:22:36.35:470,36,0	1/1:0,27:27:57.19:787,57,0	1/1:2,20:22:36.44:522,36,0	1/1:7,12:19:52.74:649,53,0	0/0:34,0:33:98.62:0,99,1236	0/0:26,0:26:78.14:0,78,980	0/0:22,0:23:65.98:0,66,813	0/0:19,0:19:53.33:0,53,618	0/0:23,0:23:66.19:0,66,844	0/0:25,0:25:72.19:0,72,905	1/1:1,15:16:44.73:564,45,0	1/1:6,10:16:43.76:555,44,0	1/1:9,13:22:63.04:748,63,0	0/0:17,0:17:48.06:0,48,560	0/0:37,0:37:99:0,111,1414	0/0:39,0:39:99:0,117,1427	0/0:14,0:14:42:0,42,481
chr10	110609488	.	A	ATT	7016.42	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=5.582;DP=666;FS=4.249;HRun=8;HaplotypeScore=104.5347;InbreedingCoeff=0.9903;MQ=73.62;MQ0=2;MQRankSum=-2.937;QD=13.04;ReadPosRankSum=1.307;VQSLOD=2.2984;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:53:99:360,105,0	0/0:8,0:8:15.03:0,15,167	0/0:20,0:19:41.93:0,42,440	0/0:22,0:20:13.53:0,14,433	1/1:7,0:34:61.16:249,61,0	1/1:1,0:23:47.41:163,47,0	1/1:3,0:28:57.39:197,57,0	1/1:6,0:42:89.89:340,90,0	1/1:1,0:18:37.43:129,37,0	0/0:29,0:29:81.21:0,81,895	0/0:23,0:23:48.10:0,48,535	1/1:1,14:15:30.53:432,31,0	1/1:3,13:17:33.11:501,33,0	1/1:1,13:15:39.13:618,39,0	1/1:1,17:19:45.15:714,45,0	0/0:26,0:26:63.15:0,63,702	1/1:4,0:33:69.87:240,70,0	1/1:4,0:22:39.93:137,40,0	1/1:4,0:27:61.40:251,61,0	1/1:4,0:24:47.23:167,47,0	1/1:4,0:31:62.38:214,62,0	1/1:1,7:8:18.06:286,18,0	1/1:0,12:13:36.08:544,36,0	1/1:0,16:19:53.15:779,53,0	1/1:2,0:19:37.43:129,37,0	1/1:5,0:34:72.86:264,73,0	1/1:5,0:25:48.51:164,49,0	1/1:1,0:17:39.93:137,40,0
chr10	110610286	.	C	CA	3474.71	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-11.556;DP=758;FS=7.213;HRun=4;HaplotypeScore=80.2493;InbreedingCoeff=0.9943;MQ=78.92;MQ0=1;MQRankSum=-0.361;QD=35.82;ReadPosRankSum=-0.901;VQSLOD=3.4874;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,123,1374	0/0:16,0:16:48.14:0,48,545	0/0:16,0:16:42.10:0,42,465	0/0:21,0:21:29.52:0,30,435	1/1:0,33:33:96.28:1292,96,0	1/1:1,16:17:14.19:582,14,0	1/1:3,18:21:51.17:698,51,0	0/0:30,0:30:81.22:0,81,910	0/0:27,0:27:81.23:0,81,919	0/0:29,0:29:84.23:0,84,945	0/0:29,0:29:87.22:0,87,968	0/0:23,0:23:69.18:0,69,773	0/0:36,0:36:99:0,105,1180	0/0:20,0:20:60.16:0,60,671	0/0:41,0:41:99:0,120,1361	0/0:31,0:31:93.24:0,93,1037	0/0:41,0:41:99:0,117,1316	0/0:24,0:23:66.15:0,66,734	0/0:21,0:21:63.17:0,63,707	0/0:32,0:32:90.23:0,90,1002	0/0:25,0:25:63.18:0,63,715	0/0:25,0:25:69.20:0,69,782	0/0:28,0:28:81.23:0,81,919	0/0:33,0:33:93.24:0,93,1044	1/1:2,24:26:66.22:903,66,0	0/0:30,0:30:84.24:0,84,953	0/0:27,0:27:72.19:0,72,806	0/0:11,0:11:30.07:0,30,331
chr10	110612162	.	T	TA	1534.24	PASS	AB=0.947;AC=10;AF=0.179;AN=56;BaseQRankSum=9.853;DP=684;FS=0.000;HRun=10;HaplotypeScore=73.8520;InbreedingCoeff=0.7435;MQ=73.57;MQ0=1;MQRankSum=0.108;QD=12.47;ReadPosRankSum=-1.725;VQSLOD=3.0629;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:89.78:0,90,729	0/0:16,0:16:38.93:0,39,318	0/0:22,0:22:39.30:0,39,306	0/1:15,0:12:8.85:9,0,75	1/1:7,20:27:38.75:472,39,0	1/1:2,21:24:41.90:415,42,0	1/1:5,17:22:33.11:436,33,0	0/0:24,0:24:53.90:0,54,441	0/0:20,0:21:49.94:0,50,396	0/0:36,0:36:92.87:0,93,763	0/0:24,0:24:62.84:0,63,507	0/0:34,0:34:80.47:0,80,650	0/0:22,0:22:50.91:0,51,416	0/0:24,0:24:56.84:0,57,459	0/0:29,0:29:62.88:0,63,517	0/0:26,0:27:64.92:0,65,519	0/0:24,0:24:68.85:0,69,557	0/0:20,1:22:6.03:0,6,323	0/1:15,2:17:34.06:34,0,165	0/0:29,0:29:41.58:0,42,327	0/0:21,0:21:50.90:0,51,418	0/0:31,0:31:68.08:0,68,543	0/0:27,0:27:77.78:0,78,624	0/0:18,0:18:47.91:0,48,390	1/1:2,16:18:22.29:336,22,0	0/0:27,0:28:66.98:0,67,529	0/0:38,1:39:75.17:0,75,802	0/0:6,0:6:14.47:0,14,119
chr10	110613582	.	CA	C	6769.21	PASS	AB=0.967;AC=33;AF=0.589;AN=56;BaseQRankSum=8.449;DP=536;FS=0.731;HRun=9;HaplotypeScore=89.4871;InbreedingCoeff=0.7730;MQ=77.89;MQ0=0;MQRankSum=1.184;QD=19.51;ReadPosRankSum=-0.387;VQSLOD=4.8518;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:33.02:301,33,0	0/1:8,1:9:0.38:0,0,250	0/0:20,0:15:17.62:0,18,173	0/1:14,0:11:6.15:6,0,67	1/1:2,24:26:63.02:576,63,0	1/1:0,30:30:81.04:740,81,0	1/1:1,12:13:36.02:329,36,0	1/1:5,20:24:59.30:512,59,0	1/1:2,16:18:42.02:383,42,0	0/0:31,0:31:82.76:0,83,917	0/0:14,0:16:41.79:0,42,444	0/1:22,0:22:3.80:4,0,131	0/0:22,0:22:24.29:0,24,175	0/0:19,0:19:23.56:0,24,179	0/0:24,0:24:28.16:0,28,201	0/0:17,1:18:14.67:0,15,394	1/1:2,20:22:57.02:519,57,0	1/1:1,17:18:48.03:438,48,0	1/1:3,15:18:44.63:361,45,0	1/1:2,23:25:66.17:568,66,0	1/1:1,5:6:12.01:110,12,0	0/0:19,0:19:14.16:0,14,124	0/0:11,0:11:3.58:0,4,69	0/0:9,0:9:0.33:0,0,56	1/1:2,22:24:60.03:549,60,0	1/1:4,32:36:64.04:800,64,0	1/1:2,21:23:53.73:491,54,0	1/1:0,3:3:9:82,9,0
chr10	110613761	.	CTGTGTGTGTGTGTGTGTGTGTGTGTGTG	C	9114.73	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.302;DP=596;FS=0.619;HRun=0;HaplotypeScore=343.0838;InbreedingCoeff=0.9080;MQ=63.18;MQ0=18;MQRankSum=-7.900;QD=54.25;ReadPosRankSum=4.744;VQSLOD=2.8789;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:20:24.06:0,24,1284	0/0:7,0:7:12.04:0,12,957	0/0:34,0:19:11.54:0,12,160	0/0:38,0:24:24.52:0,25,1133	0/0:12,0:15:12.51:0,13,490	0/0:15,0:24:24.08:0,24,1217	0/0:15,0:16:12.51:0,13,774	0/0:23,0:23:25.64:0,26,1629	0/0:9,0:16:14.70:0,15,968	0/0:20,0:20:51.17:0,51,3680	0/0:20,0:19:23.92:0,24,1538	1/1:13,23:36:36.05:2391,36,0	1/1:10,15:25:20.59:1328,21,0	1/1:11,17:28:26.96:1846,27,0	1/1:13,15:28:17.87:1188,18,0	0/0:13,0:13:33.48:0,33,2989	0/0:16,0:25:26.43:0,26,1459	0/0:12,0:19:42.14:0,42,2838	0/0:21,0:20:45.14:0,45,2335	0/0:8,0:13:8.55:0,9,616	0/0:28,0:37:45.08:0,45,2406	1/1:9,9:17:18.06:1302,18,0	1/1:6,7:12:9.03:647,9,0	1/1:10,9:18:6.02:412,6,0	0/0:10,0:18:17.63:0,18,874	0/0:11,0:16:33.10:0,33,2391	0/0:15,0:18:36.59:0,37,2363	0/0:6,0:8:6.02:0,6,484
chr10	110614584	.	GA	G	3039.47	PASS	AB=0.932;AC=15;AF=0.268;AN=56;BaseQRankSum=4.318;DP=652;FS=4.379;HRun=10;HaplotypeScore=100.8543;InbreedingCoeff=0.8444;MQ=73.34;MQ0=6;MQRankSum=-1.847;QD=15.51;ReadPosRankSum=2.908;VQSLOD=4.0080;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,1:24:32.91:0,33,338	0/0:5,0:5:11.70:0,12,110	0/0:52,1:25:9.16:0,9,134	0/1:37,2:27:0.26:0,0,126	0/0:29,1:30:36.20:0,36,851	0/0:16,1:17:13.04:0,13,359	0/0:14,0:14:33.09:0,33,364	0/0:28,0:29:69.01:0,69,736	0/0:20,0:20:39.11:0,39,431	0/0:29,1:31:51.92:0,52,757	0/0:23,0:23:60.10:0,60,640	1/1:1,29:30:80.93:695,81,0	1/1:5,18:23:40.84:409,41,0	1/1:4,13:17:8.82:305,9,0	1/1:5,26:31:80.98:702,81,0	0/0:20,0:20:52.62:0,53,586	0/0:24,1:25:1.77:0,2,361	0/0:12,0:13:20.91:0,21,201	0/0:18,0:18:51.14:0,51,563	0/0:30,1:31:46.02:0,46,705	0/0:6,0:6:12.03:0,12,133	1/1:1,17:19:53.03:448,53,0	1/1:5,18:23:56.96:489,57,0	1/1:3,9:12:20.98:181,21,0	0/0:31,2:34:1.58:0,2,520	0/0:24,0:25:69.01:0,69,737	0/0:25,0:25:40.64:0,41,424	0/0:13,0:13:21.05:0,21,231
chr10	110614615	.	C	CAAA	6095.67	PASS	AB=0.731;AC=38;AF=0.679;AN=56;BaseQRankSum=0.110;DP=638;FS=6.778;HRun=14;HaplotypeScore=128.6370;InbreedingCoeff=0.2915;MQ=69.18;MQ0=0;MQRankSum=-2.107;QD=11.57;ReadPosRankSum=-3.668;VQSLOD=1.5750;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,14:30:27.45:327,27,0	0/0:4,0:8:12.03:0,12,115	1/1:30,0:21:1.30:51,1,0	0/0:26,0:18:5.25:0,5,38	1/1:16,1:32:64.40:756,64,0	1/1:10,7:18:15.05:228,15,0	1/1:11,1:16:24.06:320,24,0	1/1:4,12:19:42.08:549,42,0	1/1:2,11:15:18.06:313,18,0	0/0:23,0:29:0.95:0,1,369	0/0:16,0:21:40.15:0,40,362	0/1:23,0:31:3.27:108,0,3	0/1:18,0:22:22.40:101,0,22	0/1:13,0:15:17.51:45,0,18	0/1:16,0:25:33.59:100,0,34	0/0:21,0:27:48.97:0,49,467	1/1:4,20:29:24.04:345,24,0	0/1:7,9:16:6.74:318,0,7	1/1:6,11:20:15.48:533,15,0	1/1:9,13:28:50.88:570,51,0	1/1:1,3:6:6.02:88,6,0	0/1:14,0:23:9.71:10,0,132	0/1:8,0:21:9.41:9,0,43	0/1:3,0:20:7.04:7,0,44	1/1:25,0:39:19.61:256,20,0	1/1:7,18:30:46.69:667,47,0	1/1:6,15:25:16.25:195,16,0	1/1:2,9:15:15.01:202,15,0
chr10	110615486	.	GA	G	2148.35	PASS	AB=0.815;AC=37;AF=0.661;AN=56;BaseQRankSum=8.909;DP=684;FS=7.108;HRun=15;HaplotypeScore=88.5075;InbreedingCoeff=0.3551;MQ=72.97;MQ0=2;MQRankSum=0.236;QD=4.10;ReadPosRankSum=4.832;VQSLOD=1.2203;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,13:24:4.39:91,4,0	0/1:9,3:13:11.64:12,0,142	0/0:31,0:20:14.60:0,15,133	0/1:24,0:14:21.46:21,0,41	0/0:20,0:23:7.60:0,8,216	0/0:17,3:22:21.67:0,22,315	0/1:16,2:18:13.07:13,0,175	0/1:21,5:27:22.58:71,0,23	1/1:12,18:32:26.79:243,27,0	0/1:22,3:27:21.11:21,0,200	0/0:26,3:31:10.36:0,10,351	1/1:6,1:30:31.39:101,31,0	1/1:7,0:25:26.41:76,26,0	1/1:8,0:24:20.62:59,21,0	1/1:9,0:28:30.55:99,31,0	0/0:33,0:34:2.97:0,3,243	1/1:6,16:24:1.81:104,2,0	1/1:6,5:13:24.73:144,25,0	1/1:11,12:25:18.58:220,19,0	1/1:9,16:26:19.22:218,19,0	0/1:12,16:28:8.97:205,0,9	1/1:7,1:22:20.47:71,20,0	1/1:7,1:30:32.96:107,33,0	1/1:5,1:21:24.17:79,24,0	0/0:18,1:19:16.72:0,17,264	0/1:10,9:20:50.51:91,0,51	1/1:9,16:24:23.37:153,23,0	1/1:9,8:17:20.58:134,21,0
chr10	110616300	.	CCAAA	C	1100.57	PASS	AB=0.947;AC=20;AF=0.370;AN=54;BaseQRankSum=5.008;DP=431;FS=39.481;HRun=0;HaplotypeScore=98.2890;InbreedingCoeff=0.3422;MQ=39.55;MQ0=8;MQRankSum=-3.002;QD=4.74;ReadPosRankSum=-1.213;VQSLOD=0.1898;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:17:17.11:17,0,232	0/0:12,0:12:10.63:0,11,278	./.	0/0:5,0:2:5.61:0,6,53	0/0:25,0:25:14.80:0,15,412	0/0:15,0:15:35.47:0,35,392	0/0:12,0:13:38.73:0,39,354	0/1:29,1:31:50.16:50,0,388	0/1:11,0:12:17.94:18,0,114	0/0:16,0:18:53.45:0,53,455	0/0:11,0:11:14.95:0,15,153	1/1:23,0:23:37.91:254,38,0	1/1:17,0:17:27.04:171,27,0	1/1:15,0:15:31.15:237,31,0	1/1:11,0:11:25.09:173,25,0	0/0:15,0:15:44.71:0,45,441	0/1:9,0:10:41.62:42,0,55	0/0:12,0:12:28.95:0,29,211	0/1:15,1:16:10.43:10,0,180	0/1:18,0:18:15.87:16,0,142	0/0:4,2:6:8.74:0,9,51	1/1:11,0:11:20.43:189,20,0	1/1:20,0:19:7.68:61,8,0	0/1:6,0:5:1.92:36,0,2	0/0:16,1:17:35.16:0,35,469	0/1:18,0:19:10.95:11,0,301	0/0:23,0:21:45.65:0,46,362	0/0:20,1:20:1.87:0,2,260
chr10	110618683	.	CCA	C	15424.76	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.758;DP=823;FS=0.000;HRun=0;HaplotypeScore=100.4926;InbreedingCoeff=0.9997;MQ=81.25;MQ0=0;MQRankSum=-2.925;QD=44.71;ReadPosRankSum=2.637;VQSLOD=5.7391;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,51:51:99:2251,138,0	0/0:13,0:13:39.11:0,39,734	0/0:29,0:29:84.29:0,84,1639	0/0:25,0:25:70.11:0,70,1270	0/0:17,0:17:51.18:0,51,1036	0/0:20,0:20:60.21:0,60,1219	0/0:13,0:13:39.13:0,39,775	1/1:0,34:34:99:1586,99,0	1/1:0,35:35:99:1615,99,0	0/0:34,0:34:99:0,99,1990	0/0:12,0:12:36.12:0,36,732	0/0:44,0:44:99:0,132,2627	0/0:38,0:38:99:0,114,2293	0/0:35,0:35:99:0,105,2131	0/0:47,0:47:99:0,141,2844	0/0:47,0:47:99:0,141,2848	1/1:0,27:27:78.27:1273,78,0	1/1:0,23:23:63.22:1028,63,0	1/1:0,10:10:30.10:490,30,0	1/1:0,13:13:36.12:587,36,0	1/1:0,60:60:99:2741,169,0	0/0:24,0:24:72.24:0,72,1395	0/0:23,0:23:69.19:0,69,1357	0/0:35,0:35:99:0,105,2122	0/0:21,0:21:63.22:0,63,1276	1/1:1,40:41:59.42:1848,59,0	1/1:0,36:36:96.33:1565,96,0	1/1:0,15:15:27.09:440,27,0
chr10	110619125	.	AAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	A	2181.54	PASS	AB=1.000;AC=22;AF=0.407;AN=54;BaseQRankSum=1.879;DP=314;FS=1.863;HRun=0;HaplotypeScore=300.6920;InbreedingCoeff=0.4272;MQ=61.85;MQ0=2;MQRankSum=-6.063;QD=15.69;ReadPosRankSum=2.087;VQSLOD=2.3228;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:5:0.45:59,0,0	0/0:3,0:3:6.02:0,6,406	0/0:18,0:12:29.66:0,30,469	0/0:15,0:9:21.01:0,21,475	0/0:21,0:21:53.94:0,54,6863	0/0:16,0:16:48.16:0,48,6157	0/0:16,0:16:45.13:0,45,4523	0/1:21,0:17:99:147,0,527	0/0:4,0:3:2.29:0,2,6	0/0:13,0:13:36.12:0,36,6083	0/0:18,0:18:51.63:0,52,6237	1/1:10,0:10:19.26:249,19,0	1/1:0,8:8:2.54:339,3,0	1/1:8,0:8:24.07:314,24,0	1/1:8,0:8:18.06:360,18,0	0/0:16,0:16:45.15:0,45,5856	0/1:11,0:11:42.21:42,0,172	0/1:13,0:11:99:100,0,364	0/1:10,0:9:79.69:80,0,278	1/1:9,0:7:0.01:31,0,0	./.	1/1:7,0:7:21.06:248,21,0	1/1:12,0:11:20.55:222,21,0	1/1:7,0:7:11.60:143,12,0	0/0:20,0:20:54.19:0,54,6728	0/1:9,0:7:32.20:32,0,824	0/0:9,0:5:6.36:0,6,77	0/0:5,0:3:3.01:0,3,39
chr10	110619129	.	GA	G	3040.49	PASS	AB=0.615;AC=33;AF=0.611;AN=54;BaseQRankSum=6.720;DP=305;FS=4.643;HRun=5;HaplotypeScore=44.3380;InbreedingCoeff=0.8097;MQ=62.37;MQ0=1;MQRankSum=-8.866;QD=20.83;ReadPosRankSum=1.967;VQSLOD=2.7700;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,3:4:9.03:104,9,0	0/0:2,0:2:6.02:0,6,83	0/0:17,0:12:26.95:0,27,347	0/0:14,0:8:20.89:0,21,238	0/0:23,0:23:43.53:0,44,410	0/0:18,0:17:51.17:0,51,708	0/0:18,0:18:50.16:0,50,623	1/1:1,19:15:42.13:503,42,0	1/1:0,3:2:6.02:72,6,0	0/0:14,0:14:42.14:0,42,585	0/0:18,0:18:51.15:0,51,693	1/1:2,8:10:19.26:249,19,0	1/1:8,0:8:2.68:11,3,0	1/1:0,8:8:24.07:287,24,0	1/1:0,6:6:18.05:214,18,0	0/0:16,0:16:45.15:0,45,626	1/1:2,8:10:24.07:285,24,0	1/1:1,12:11:24.07:288,24,0	1/1:2,7:8:18.04:204,18,0	1/1:1,6:5:12.04:144,12,0	./.	1/1:0,7:7:21.06:248,21,0	1/1:1,9:9:20.93:227,21,0	1/1:0,7:7:12.04:144,12,0	0/0:19,0:19:57.19:0,57,793	0/1:3,5:6:65.79:126,0,66	1/1:1,9:6:9.03:108,9,0	1/1:1,4:3:3.01:36,3,0
chr10	110619130	.	AAAAG	A	375.90	PASS	AB=0.947;AC=5;AF=0.227;AN=22;BaseQRankSum=4.924;DP=302;FS=0.000;HRun=0;HaplotypeScore=68.6520;InbreedingCoeff=0.5016;MQ=62.61;MQ0=1;MQRankSum=1.305;QD=7.83;ReadPosRankSum=-0.123;VQSLOD=1.5982;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:8,14:22:32.98:424,33,0	0/0:19,0:18:25.33:0,25,505	0/1:17,1:18:21.38:21,0,354	./.	./.	0/0:16,0:16:39.13:0,39,826	0/0:18,0:18:27.09:0,27,625	./.	1/1:8,0:8:2.75:28,3,0	./.	./.	0/0:16,0:16:24.08:0,24,555	./.	0/0:12,0:10:2.99:0,3,23	./.	./.	./.	./.	./.	0/0:7,0:7:0:0,0,0	0/0:20,0:20:33.09:0,33,675	0/0:8,0:6:6.02:0,6,117	./.	./.
chr10	110619159	.	A	AG	518.68	PASS	AB=0.753;AC=10;AF=0.250;AN=40;BaseQRankSum=6.430;DP=240;FS=16.062;HRun=1;HaplotypeScore=57.1518;InbreedingCoeff=0.2397;MQ=52.65;MQ0=2;MQRankSum=-5.645;QD=8.23;ReadPosRankSum=-0.708;VQSLOD=-0.6684;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,2:3:2.90:0,3,16	0/0:2,0:2:6.01:0,6,66	0/0:7,0:3:1.82:0,2,5	0/0:2,0:1:0:0,0,0	0/0:29,0:29:86.83:0,87,1014	0/0:18,0:17:48.15:0,48,656	0/0:18,0:18:54.11:0,54,730	0/1:11,2:8:30.77:33,0,31	0/1:1,2:2:0:0,0,0	0/0:24,0:23:66.21:0,66,908	0/0:15,0:15:39.12:0,39,527	./.	0/0:8,0:8:2.21:0,2,7	./.	./.	0/0:20,0:20:60.20:0,60,835	1/1:5,0:5:4.53:52,5,0	0/1:6,3:8:50.80:104,0,51	0/1:3,1:3:23.67:30,0,24	./.	./.	./.	./.	./.	0/0:17,0:17:51.17:0,51,713	0/1:6,6:10:72.21:248,0,72	1/1:7,5:8:12.04:170,12,0	0/1:4,1:3:0:0,0,0
chr10	110619802	.	TTTTG	T	251.65	PASS	AB=0.979;AC=15;AF=0.268;AN=56;BaseQRankSum=6.272;DP=529;FS=59.293;HRun=0;HaplotypeScore=114.0640;InbreedingCoeff=-0.1953;MQ=36.18;MQ0=25;MQRankSum=-0.810;QD=1.02;ReadPosRankSum=3.792;VQSLOD=-0.4501;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:19:44.32:44,0,102	0/0:7,0:7:20.75:0,21,214	0/0:26,0:5:10.19:0,10,75	0/0:31,0:3:9:0,9,111	0/0:30,0:28:45.73:0,46,420	0/0:17,0:16:36.74:0,37,364	0/0:19,0:19:49.22:0,49,436	0/0:27,1:27:70.63:0,71,526	0/1:9,2:10:57.31:79,0,57	0/0:27,1:25:34.64:0,35,445	0/1:20,0:19:6.69:7,0,274	0/0:18,0:18:31.97:0,32,254	0/1:13,0:13:8.53:9,0,79	0/0:23,0:22:40.93:0,41,362	0/1:19,0:19:25.43:25,0,200	0/0:13,0:13:26.31:0,26,364	0/1:12,0:12:2.44:2,0,117	0/1:10,0:7:30.55:35,0,31	0/0:11,0:10:26.10:0,26,160	0/0:21,0:21:11.51:0,12,239	1/1:6,0:5:3.26:26,3,0	0/1:22,0:21:7.76:8,0,162	0/1:21,0:20:1.18:1,0,91	0/1:15,0:12:13.07:13,0,109	0/1:10,1:11:34.52:35,0,132	0/1:32,1:29:17.04:17,0,362	0/1:32,0:32:98.97:99,0,197	0/0:9,0:9:8.60:0,9,104
chr10	110619897	.	T	TG	9460.28	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=15.836;DP=570;FS=2.514;HRun=0;HaplotypeScore=110.8684;InbreedingCoeff=0.9832;MQ=63.18;MQ0=14;MQRankSum=-2.906;QD=30.82;ReadPosRankSum=1.874;VQSLOD=4.5530;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:25:71.33:879,71,0	0/0:10,0:10:30.10:0,30,419	0/0:14,0:9:27.09:0,27,369	0/0:17,0:11:30.07:0,30,383	1/1:3,22:24:50.92:637,51,0	1/1:1,23:23:66.02:835,66,0	1/1:2,15:16:30.09:402,30,0	1/1:3,19:21:47.89:581,48,0	1/1:2,20:21:56.11:759,56,0	0/0:18,0:16:48.15:0,48,655	0/0:12,0:12:36.09:0,36,458	0/0:28,0:27:75.97:0,76,962	0/0:22,0:22:63.17:0,63,859	0/0:24,0:24:68.36:0,68,886	0/0:30,0:30:84.24:0,84,1137	0/0:22,0:22:60.18:0,60,802	1/1:2,27:29:33.82:918,34,0	1/1:0,13:12:30.10:399,30,0	1/1:2,10:12:30.02:395,30,0	1/1:3,13:16:35.97:448,36,0	1/1:1,31:32:90.18:1190,90,0	0/0:25,0:24:72.15:0,72,962	0/0:19,0:19:57.10:0,57,743	0/0:22,0:21:60.20:0,60,839	1/1:2,7:8:18.01:243,18,0	1/1:4,17:18:19.72:501,20,0	1/1:0,33:33:90.29:1193,90,0	1/1:0,3:3:6.02:80,6,0
chr10	110620434	.	GAGAC	G	11725.93	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=14.732;DP=852;FS=5.987;HRun=0;HaplotypeScore=187.0834;InbreedingCoeff=0.2924;MQ=60.77;MQ0=5;MQRankSum=-6.505;QD=17.98;ReadPosRankSum=8.370;VQSLOD=3.5590;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:34:30.10:573,30,0	0/0:8,0:8:24.05:0,24,540	0/0:56,0:29:75.21:0,75,1059	0/0:39,0:24:65.78:0,66,959	0/1:40,0:40:79.76:160,0,80	0/1:27,0:27:23.34:116,0,23	0/1:21,0:21:53.18:53,0,56	1/1:2,35:38:99:1402,107,0	1/1:1,26:27:33.11:654,33,0	0/0:39,0:39:99:0,104,2250	0/0:19,0:19:53.97:0,54,975	0/1:31,0:31:80.46:80,0,174	0/1:31,0:31:37.64:118,0,38	0/1:29,0:29:66.67:138,0,67	0/1:38,0:38:79.53:130,0,80	0/0:39,0:39:99:0,117,2368	1/1:3,35:38:57.04:1095,57,0	1/1:9,7:16:34.02:564,34,0	1/1:1,17:17:48.02:651,48,0	1/1:1,35:37:59.94:1167,60,0	1/1:1,28:28:21.07:417,21,0	1/1:19,0:19:32.37:132,32,0	0/1:21,0:21:32.03:32,0,115	0/1:28,0:27:17.56:18,0,54	1/1:30,0:30:2.49:130,2,0	1/1:2,43:47:54.56:2156,55,0	1/1:3,31:36:68.84:1345,69,0	1/1:0,16:16:30.10:596,30,0
chr10	110620436	.	GACACAC	G	9461.03	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-5.569;DP=841;FS=3.665;HRun=0;HaplotypeScore=217.5830;InbreedingCoeff=0.6966;MQ=59.38;MQ0=5;MQRankSum=-14.604;QD=19.63;ReadPosRankSum=2.727;VQSLOD=4.4325;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:26.96:27,0,88	0/0:7,0:7:18.06:0,18,601	0/0:58,0:28:26.88:0,27,495	0/0:40,0:24:39.75:0,40,683	1/1:6,32:40:55.07:1154,55,0	1/1:2,23:25:48.16:1032,48,0	1/1:4,16:20:27.09:552,27,0	0/1:36,0:36:2.95:3,0,408	0/0:26,0:26:29.47:0,29,128	0/0:34,0:37:83.98:0,84,2360	0/0:18,0:19:39.11:0,39,1060	1/1:8,23:31:43.51:930,44,0	1/1:5,25:31:44.89:945,45,0	1/1:5,24:29:48.16:1020,48,0	1/1:8,29:37:60.20:1263,60,0	0/0:40,0:40:90.25:0,90,2520	0/0:37,0:37:14.08:0,14,183	0/0:17,0:17:4.17:0,4,181	0/1:20,0:18:55.46:55,0,166	0/1:36,0:36:0.55:1,0,174	0/0:29,0:28:19:0,19,86	1/1:0,16:18:39.13:788,39,0	1/1:6,15:21:20.77:422,21,0	1/1:6,21:27:9.03:194,9,0	1/1:2,26:29:51.17:1075,51,0	0/1:47,0:47:0.46:0,0,572	0/0:33,0:33:14.17:0,14,213	0/0:16,0:16:28.10:0,28,129
chr10	110621417	.	GCGCA	G	803.69	PASS	AB=0.781;AC=14;AF=0.259;AN=54;BaseQRankSum=1.841;DP=511;FS=22.997;HRun=0;HaplotypeScore=102.4675;InbreedingCoeff=0.4179;MQ=60.69;MQ0=8;MQRankSum=0.458;QD=4.90;ReadPosRankSum=-0.206;VQSLOD=0.6211;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:39.68:0,40,385	0/0:3,0:3:8.99:0,9,144	1/1:2,0:1:2.84:14,3,0	./.	0/0:14,0:14:20.85:0,21,292	0/0:15,0:15:14.63:0,15,366	0/0:22,0:22:36.09:0,36,522	0/0:24,0:24:40.84:0,41,299	0/0:10,0:7:15.34:0,15,109	0/1:20,0:19:21.40:21,0,328	0/0:10,0:10:26.74:0,27,315	1/1:2,17:19:1.06:110,1,0	1/1:13,0:12:29.79:219,30,0	1/1:5,18:24:18.06:288,18,0	0/1:3,2:15:19.72:105,0,20	0/0:9,0:9:23.89:0,24,288	0/0:31,0:31:33.77:0,34,326	0/0:38,0:38:8.06:0,8,322	0/1:18,0:17:48.37:48,0,106	0/0:22,0:22:44.68:0,45,290	0/0:27,0:27:47.73:0,48,315	1/1:2,16:18:3.48:56,3,0	0/0:13,0:13:1.50:0,2,20	0/1:8,25:32:33.05:102,0,33	0/0:10,0:10:8.99:0,9,127	0/0:20,0:20:26.78:0,27,313	0/0:23,0:23:27.28:0,27,191	0/0:9,0:9:14.49:0,14,72
chr10	110621419	.	GCA	G	1166.50	PASS	AB=0.933;AC=33;AF=0.635;AN=52;BaseQRankSum=4.460;DP=506;FS=0.986;HRun=0;HaplotypeScore=87.5560;InbreedingCoeff=0.2110;MQ=60.40;MQ0=10;MQRankSum=0.847;QD=2.80;ReadPosRankSum=3.368;VQSLOD=1.5798;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,12:39:11.86:111,12,0	0/0:3,0:3:3.01:0,3,44	./.	./.	0/0:14,0:14:8.89:0,9,89	0/0:15,0:15:7.91:0,8,194	0/1:21,0:21:2.67:3,0,140	0/0:23,2:25:2.13:0,2,5	1/1:6,4:7:5.84:64,6,0	0/1:19,0:18:56.21:56,0,104	0/1:10,1:10:17.46:17,0,89	1/1:18,0:18:8.70:55,9,0	1/1:15,0:14:8.93:65,9,0	1/1:25,0:23:17.41:102,17,0	0/1:16,0:16:9.29:60,0,9	0/0:8,0:8:6:0,6,66	1/1:17,12:30:14.87:143,15,0	1/1:21,15:38:20.78:191,21,0	1/1:12,4:16:14.75:107,15,0	0/1:18,4:22:10.97:26,0,11	0/1:18,8:26:10.94:56,0,11	1/1:18,0:18:3.17:18,3,0	0/0:13,0:13:2.83:0,3,21	0/1:33,0:31:12.14:53,0,12	1/1:9,0:9:2.74:12,3,0	1/1:20,0:20:5.89:43,6,0	1/1:13,8:21:5.40:45,5,0	1/1:3,6:9:9.02:97,9,0
chr10	110621609	.	AT	A	2196.63	PASS	AB=0.718;AC=36;AF=0.643;AN=56;BaseQRankSum=7.587;DP=486;FS=4.945;HRun=15;HaplotypeScore=68.5365;InbreedingCoeff=0.7622;MQ=69.93;MQ0=21;MQRankSum=-0.313;QD=6.84;ReadPosRankSum=2.788;VQSLOD=2.8859;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,11:22:13.98:204,14,0	0/0:6,0:5:6:0,6,53	0/0:38,0:19:20.51:0,21,132	0/0:19,0:6:4.20:0,4,23	0/0:16,1:17:14.93:0,15,238	0/0:14,0:15:29.83:0,30,250	0/0:19,2:21:9.22:0,9,309	1/1:11,5:24:34.82:174,35,0	1/1:4,8:10:22.68:140,23,0	0/0:15,0:14:29.95:0,30,256	0/1:17,4:22:19.22:19,0,287	1/1:4,0:19:24.10:70,24,0	1/1:3,0:12:16.47:48,16,0	1/1:4,0:17:26.30:76,26,0	1/1:2,0:14:20.35:59,20,0	0/0:11,0:11:21:0,21,185	1/1:10,19:27:44.21:288,44,0	1/1:5,11:16:8.41:173,8,0	1/1:6,11:16:37.28:235,37,0	1/1:5,12:16:9.37:185,9,0	0/1:2,5:7:11.52:62,0,12	1/1:4,4:18:32.18:136,32,0	1/1:5,0:14:18.29:53,18,0	1/1:7,0:14:17.19:60,17,0	0/0:19,1:21:46.99:0,47,430	1/1:7,12:21:37.39:236,37,0	1/1:4,7:12:22.63:140,23,0	1/1:2,2:5:7.95:44,8,0
chr10	110621795	.	C	CA	2305.36	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.692;DP=633;FS=2.811;HRun=7;HaplotypeScore=87.7547;InbreedingCoeff=0.9779;MQ=82.86;MQ0=7;MQRankSum=0.931;QD=26.20;ReadPosRankSum=1.330;VQSLOD=4.2350;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:75.96:0,76,775	0/0:5,0:5:15.02:0,15,145	0/0:60,0:43:58.91:0,59,600	0/0:54,0:37:49.44:0,49,443	1/1:7,18:25:51.05:581,51,0	1/1:0,26:26:72.22:870,72,0	1/1:1,14:14:33.10:399,33,0	0/0:22,0:22:60.02:0,60,559	0/0:12,0:12:33.05:0,33,319	0/0:23,0:23:60.08:0,60,574	0/0:24,0:24:69.07:0,69,658	0/0:21,0:21:60.10:0,60,578	0/0:13,0:13:30.04:0,30,290	0/0:16,0:16:36.06:0,36,347	0/0:20,0:20:60.10:0,60,579	0/0:22,0:22:60.08:0,60,574	0/0:27,0:27:69.10:0,69,662	0/0:28,0:28:66.08:0,66,630	0/0:20,0:20:60.10:0,60,579	0/0:34,0:34:93.09:0,93,883	0/0:12,0:12:33.05:0,33,319	0/0:11,0:11:24.02:0,24,227	0/0:14,1:15:8.83:0,9,369	0/0:16,0:16:45.07:0,45,435	1/1:0,22:22:51.16:616,51,0	0/0:26,0:25:68.90:0,69,666	0/0:17,0:16:45.05:0,45,428	0/0:12,0:12:30.05:0,30,290
chr10	110624652	.	T	TA	4439.58	PASS	AB=0.821;AC=22;AF=0.393;AN=56;BaseQRankSum=-11.328;DP=520;FS=10.611;HRun=10;HaplotypeScore=51.9784;InbreedingCoeff=0.8213;MQ=77.53;MQ0=1;MQRankSum=-1.492;QD=19.64;ReadPosRankSum=-2.600;VQSLOD=4.2081;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:42.11:448,42,0	0/1:5,0:5:12.22:12,0,62	0/0:11,1:12:9.44:0,9,176	0/0:13,0:14:12.32:0,12,155	0/0:24,0:24:42.37:0,42,421	0/0:26,0:26:65.77:0,66,528	0/0:15,0:15:38.95:0,39,320	1/1:12,27:39:16.05:672,16,0	1/1:4,17:22:35.92:366,36,0	0/0:17,0:17:38.92:0,39,317	0/0:5,0:5:14.98:0,15,123	0/0:20,0:23:48.94:0,49,376	0/0:18,0:18:35.91:0,36,288	0/0:20,0:21:55.95:0,56,446	0/0:32,0:32:86.82:0,87,702	0/0:29,0:29:68.88:0,69,564	1/1:4,24:27:50.90:511,51,0	1/1:0,8:8:18.05:192,18,0	1/1:3,15:18:45.06:467,45,0	0/1:4,5:9:17.47:110,0,17	1/1:1,13:14:36.09:384,36,0	0/0:18,0:18:47.92:0,48,391	0/0:10,0:11:25.99:0,26,200	0/0:18,0:18:47.87:0,48,384	0/0:11,0:11:32.96:0,33,271	1/1:5,16:22:7.64:464,8,0	1/1:9,19:29:10.87:526,11,0	1/1:0,12:12:26.59:287,27,0
chr10	110624837	.	CATTCATATATATATATATATATATATAT	C	2535.73	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.084;DP=213;FS=13.033;HRun=0;HaplotypeScore=134.7833;InbreedingCoeff=0.6839;MQ=80.56;MQ0=2;MQRankSum=-5.004;QD=61.85;ReadPosRankSum=5.091;VQSLOD=1.9288;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:27.07:0,27,552	0/0:3,0:3:9.03:0,9,160	0/0:8,0:7:18.06:0,18,305	0/0:16,0:12:20.66:0,21,482	1/1:2,1:9:6.02:270,6,0	1/1:0,13:14:21.07:1510,21,0	1/1:3,0:8:3.01:203,3,0	0/0:10,0:10:27.08:0,27,776	0/0:1,0:1:3.01:0,3,50	0/0:7,0:7:21.06:0,21,365	0/0:4,0:4:12.03:0,12,174	0/0:9,0:8:15.05:0,15,511	0/0:5,0:5:9.03:0,9,241	0/0:4,0:4:6.02:0,6,190	0/0:11,0:11:15.02:0,15,472	0/0:2,0:2:3.01:0,3,51	0/0:16,0:16:45.11:0,45,2205	0/0:12,0:12:33.07:0,33,1915	0/0:10,0:10:30.09:0,30,1075	0/0:8,0:8:18.05:0,18,276	0/0:2,0:2:6.02:0,6,110	0/0:7,0:7:15.05:0,15,252	0/0:6,0:6:18.06:0,18,302	0/0:6,0:5:9.50:0,10,150	1/1:1,8:10:12.04:690,12,0	0/0:7,0:7:18.05:0,18,441	0/0:7,0:7:18.06:0,18,292	0/0:2,0:2:6.01:0,6,399
chr10	110624839	.	TTC	T	223.12	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=5.734;DP=205;FS=18.304;HRun=0;HaplotypeScore=47.9984;InbreedingCoeff=0.6168;MQ=81.26;MQ0=2;MQRankSum=-4.318;QD=4.06;ReadPosRankSum=4.351;VQSLOD=0.4129;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:27.07:0,27,409	0/0:3,0:3:9.03:0,9,146	0/0:8,0:7:18.05:0,18,297	0/1:16,0:12:2.98:3,0,302	1/1:7,1:8:6.02:67,6,0	1/1:14,0:14:20.90:168,21,0	1/1:5,2:7:2.98:22,3,0	0/0:10,0:10:22.64:0,23,383	0/0:1,0:1:3.01:0,3,50	0/0:7,0:7:21.06:0,21,365	0/0:4,0:4:12.03:0,12,174	0/0:8,0:7:14.36:0,14,152	0/0:5,0:5:9.02:0,9,124	0/0:4,0:4:6:0,6,74	0/0:11,0:11:14.95:0,15,116	0/0:1,0:1:3.01:0,3,51	0/0:16,0:16:45.05:0,45,634	0/0:12,0:12:33.07:0,33,531	0/0:10,0:10:19.98:0,20,432	0/0:6,0:6:18.05:0,18,276	0/0:2,0:2:6.02:0,6,99	0/0:6,0:6:15.05:0,15,234	0/0:6,0:6:18.06:0,18,284	0/0:6,0:5:9.03:0,9,150	1/1:9,1:10:11.96:102,12,0	0/0:6,0:6:18.05:0,18,301	0/0:7,0:7:18.06:0,18,292	0/0:2,0:2:6.01:0,6,60
chr10	110624858	.	ATATATATAT	A	1278.70	PASS	AC=18;AF=0.450;AN=40;BaseQRankSum=6.076;DP=134;FS=7.300;HRun=0;HaplotypeScore=52.0046;InbreedingCoeff=0.6467;MQ=65.82;MQ0=7;MQRankSum=-5.866;QD=20.30;ReadPosRankSum=5.014;VQSLOD=0.3619;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:3.01:0,3,38	0/0:2,0:2:6.02:0,6,128	0/0:6,0:2:2.94:0,3,18	0/0:16,0:5:13.27:0,13,122	1/1:8,0:8:5.93:41,6,0	1/1:14,0:14:20.99:371,21,0	1/1:7,0:7:3.01:63,3,0	0/0:8,0:8:24.08:0,24,666	./.	./.	./.	1/1:1,5:5:9.03:283,9,0	1/1:0,3:3:3.01:97,3,0	1/1:0,2:2:3.01:98,3,0	1/1:0,9:9:9.03:293,9,0	./.	0/0:14,0:14:33.09:0,33,735	0/0:8,0:8:21.07:0,21,867	0/0:2,0:2:6.02:0,6,275	./.	./.	./.	./.	1/1:2,0:3:0.89:2,1,0	1/1:10,0:10:8.78:179,9,0	0/0:4,0:4:12.04:0,12,325	0/0:1,0:1:3.01:0,3,142	0/0:5,0:5:12.04:0,12,346
chr10	110625927	.	A	AT	5744.02	PASS	AB=0.567;AC=20;AF=0.357;AN=56;BaseQRankSum=-14.122;DP=537;FS=2.678;HRun=9;HaplotypeScore=60.5643;InbreedingCoeff=0.8720;MQ=75.46;MQ0=0;MQRankSum=-2.948;QD=23.64;ReadPosRankSum=-1.350;VQSLOD=5.2882;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:51.10:551,51,0	0/0:5,0:5:11.99:0,12,104	0/0:11,0:11:17.75:0,18,139	0/0:13,0:12:20.64:0,21,164	0/0:32,0:32:83.97:0,84,729	0/0:25,1:26:35.77:0,36,540	0/0:21,0:21:53.96:0,54,465	1/1:8,22:31:69.02:744,69,0	1/1:2,19:21:51.14:564,51,0	0/0:24,0:24:59.96:0,60,518	0/0:18,0:18:47.97:0,48,417	0/0:9,0:9:24.47:0,24,209	0/0:15,0:15:39.46:0,39,339	0/0:20,0:20:44.98:0,45,390	0/0:21,0:21:59.97:0,60,517	0/0:8,0:9:17.01:0,17,136	1/1:4,25:29:17.08:645,17,0	1/1:1,14:15:36.10:398,36,0	0/1:5,15:20:3.99:410,0,4	1/1:4,21:25:31.01:531,31,0	1/1:3,12:15:33.09:365,33,0	0/0:16,0:16:41.99:0,42,364	0/0:15,0:15:35.96:0,36,311	0/0:17,0:19:52.06:0,52,428	0/0:20,0:20:29.93:0,30,260	1/1:7,21:27:17.04:626,17,0	0/1:6,21:27:5.99:611,0,6	1/1:2,10:12:27.07:299,27,0
chr10	110626094	.	TTG	T	154.96	PASS	AB=0.946;AC=21;AF=0.525;AN=40;BaseQRankSum=5.456;DP=511;FS=0.000;HRun=0;HaplotypeScore=79.3096;InbreedingCoeff=0.3892;MQ=51.71;MQ0=18;MQRankSum=-3.877;QD=0.60;ReadPosRankSum=4.197;VQSLOD=1.2364;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:26:0:0,0,0	0/0:3,0:3:3.01:0,3,44	./.	./.	1/1:12,2:14:3:32,3,0	1/1:15,3:17:3.01:32,3,0	1/1:20,8:27:3.34:33,3,0	./.	1/1:19,0:17:2.84:14,3,0	./.	0/0:13,0:12:6.02:0,6,88	0/0:10,0:10:11.98:0,12,113	0/0:17,0:17:5.89:0,6,59	0/0:20,0:18:2.81:0,3,56	0/0:24,0:24:14.97:0,15,152	0/0:18,0:18:14.97:0,15,155	1/1:20,0:18:2.04:6,2,0	./.	0/1:23,0:21:6.51:7,0,38	1/1:16,0:16:5.68:28,6,0	./.	./.	0/0:10,0:10:3.01:0,3,34	0/1:21,5:26:7.98:8,0,189	1/1:19,5:24:3.01:32,3,0	1/1:18,0:17:2.84:14,3,0	1/1:21,0:20:16.95:81,17,0	./.
chr10	110626118	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGA	G	4097.13	PASS	AB=0.766;AC=16;AF=0.296;AN=54;BaseQRankSum=6.985;DP=419;FS=1.578;HRun=0;HaplotypeScore=198.3546;InbreedingCoeff=0.5670;MQ=48.83;MQ0=20;MQRankSum=-3.880;QD=33.04;ReadPosRankSum=0.546;VQSLOD=2.8493;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:3,25:26:14.62:349,0,15	0/0:5,0:5:15.05:0,15,1617	0/0:12,0:4:12.04:0,12,448	0/0:22,0:8:24.08:0,24,904	0/0:17,0:17:39.03:0,39,3066	0/0:21,0:20:27.85:0,28,2121	0/0:27,0:26:40.25:0,40,2285	1/1:5,0:5:9.03:154,9,0	1/1:0,11:11:6.02:445,6,0	0/0:8,0:6:18.06:0,18,856	0/0:13,0:12:27.75:0,28,2257	0/0:13,0:13:34.36:0,34,2732	0/0:18,0:18:29.88:0,30,2549	0/0:24,0:22:63.11:0,63,4291	0/0:23,0:23:48.15:0,48,4241	0/0:16,0:16:38.21:0,38,3120	1/1:1,10:11:3.01:228,3,0	0/1:5,0:5:74.29:74,0,132	0/1:2,13:14:99:587,0,286	1/1:0,9:9:6.01:474,6,0	0/1:7,0:6:0.77:1,0,40	0/0:9,0:9:21.07:0,21,1330	0/0:11,0:11:13.77:0,14,1236	0/0:31,0:30:51.96:0,52,5237	0/0:23,0:22:29.72:0,30,1423	1/1:4,1:3:8.99:369,9,0	1/1:1,25:25:18.06:1416,18,0	./.
chr10	110626146	.	GA	G	1486.31	PASS	AB=0.550;AC=21;AF=0.375;AN=56;BaseQRankSum=7.155;DP=412;FS=12.431;HRun=5;HaplotypeScore=71.0908;InbreedingCoeff=0.8038;MQ=62.69;MQ0=5;MQRankSum=-0.595;QD=9.53;ReadPosRankSum=1.007;VQSLOD=0.3950;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:25:0.47:1,0,0	0/0:4,0:4:12.04:0,12,164	0/0:25,0:19:50.79:0,51,579	0/0:21,0:14:37.85:0,38,431	0/0:16,0:16:42.03:0,42,540	0/0:16,0:16:30.49:0,30,376	0/0:23,0:23:42.36:0,42,526	1/1:0,15:15:45.11:499,45,0	1/1:11,0:11:3.44:21,3,0	0/0:8,0:6:18.06:0,18,246	0/0:9,0:9:24.97:0,25,328	0/0:14,0:14:37.37:0,37,493	0/0:10,0:10:21.54:0,22,288	0/0:18,0:18:45.01:0,45,569	0/0:14,0:14:39.13:0,39,533	0/0:13,0:13:36.12:0,36,492	1/1:10,0:10:2.74:12,3,0	1/1:1,8:6:11.99:121,12,0	1/1:14,0:14:19.06:372,19,0	1/1:9,0:9:5.93:41,6,0	1/1:0,14:12:11.08:134,11,0	0/0:12,0:12:33.09:0,33,422	0/0:7,0:7:20.96:0,21,262	0/0:31,0:30:48.59:0,49,644	0/0:14,0:14:29.96:0,30,359	0/1:2,9:10:10.94:262,0,11	1/1:26,0:25:17.72:117,18,0	1/1:0,11:11:9.02:102,9,0
chr10	110626248	.	TG	T	6588.76	PASS	AB=0.650;AC=43;AF=0.768;AN=56;BaseQRankSum=8.612;DP=438;FS=1.511;HRun=1;HaplotypeScore=108.8754;InbreedingCoeff=0.8389;MQ=63.49;MQ0=4;MQRankSum=-9.242;QD=20.72;ReadPosRankSum=1.561;VQSLOD=5.1143;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,4:10:29.29:193,29,0	0/0:6,0:6:3.24:0,3,177	0/0:35,0:17:29.11:0,29,360	0/0:28,0:16:24.01:0,24,332	1/1:17,13:30:62.96:636,63,0	1/1:8,5:14:26.99:271,27,0	1/1:8,4:12:26.81:246,27,0	1/1:13,7:18:44.93:388,45,0	1/1:7,12:18:52.09:411,52,0	0/0:17,0:17:35.22:0,35,629	0/0:17,0:17:48.03:0,48,648	1/1:0,9:9:18.06:225,18,0	1/1:7,6:11:27:294,27,0	1/1:1,8:8:18.05:210,18,0	1/1:2,9:12:35.99:397,36,0	0/0:17,0:17:47.20:0,47,610	1/1:7,4:10:22.08:141,22,0	1/1:2,2:4:11.91:87,12,0	1/1:17,6:21:56.75:461,57,0	1/1:4,12:15:34.14:273,34,0	1/1:3,0:3:5.99:49,6,0	1/1:2,11:12:33.02:380,33,0	1/1:3,0:16:39.60:202,40,0	1/1:2,9:10:24.03:288,24,0	1/1:6,10:16:41.45:415,41,0	0/1:12,12:24:13.88:471,0,14	1/1:7,10:16:46:352,46,0	1/1:3,5:8:23.91:198,24,0
chr10	110626250	.	TA	T	5352.27	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=9.275;DP=430;FS=2.148;HRun=3;HaplotypeScore=112.5448;InbreedingCoeff=0.9270;MQ=63.67;MQ0=4;MQRankSum=-8.899;QD=17.27;ReadPosRankSum=1.907;VQSLOD=4.5732;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:26.43:166,26,0	0/0:6,0:6:15.02:0,15,176	0/0:35,0:17:24.20:0,24,308	0/0:28,0:16:34.18:0,34,325	1/1:31,0:29:57.74:581,58,0	1/1:15,0:14:27:270,27,0	1/1:12,0:12:23.82:224,24,0	1/1:21,0:18:44.89:374,45,0	1/1:18,0:18:50.52:390,51,0	0/0:17,0:17:43.49:0,43,463	0/0:17,0:17:47.29:0,47,538	1/1:4,3:7:17.74:117,18,0	1/1:9,4:11:23.16:136,23,0	1/1:5,4:8:17.84:128,18,0	1/1:6,5:11:30.68:185,31,0	0/0:17,0:17:41.95:0,42,497	1/1:10,0:9:17.61:113,18,0	1/1:4,0:4:11.91:87,12,0	1/1:21,0:20:53.62:422,54,0	1/1:16,0:15:32.88:261,33,0	1/1:2,0:2:5.96:44,6,0	1/1:7,6:12:32.14:213,32,0	1/1:17,0:16:36.84:171,37,0	1/1:6,5:10:17.65:114,18,0	1/1:16,0:16:38.91:387,39,0	1/1:26,0:24:3.06:454,3,0	1/1:16,0:15:44.43:323,44,0	1/1:8,0:8:23.92:193,24,0
chr10	110626252	.	AAT	A	5192.91	PASS	AB=0.984;AC=42;AF=0.750;AN=56;BaseQRankSum=8.115;DP=428;FS=4.027;HRun=0;HaplotypeScore=118.7136;InbreedingCoeff=0.6985;MQ=63.20;MQ0=5;MQRankSum=-8.093;QD=16.70;ReadPosRankSum=2.589;VQSLOD=4.7496;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:10:26.32:192,26,0	0/0:6,0:6:0.84:0,1,209	0/0:35,0:17:24.44:0,24,406	0/0:27,0:15:36.35:0,36,401	0/1:30,1:29:28.56:245,0,29	1/1:7,8:14:14.89:165,15,0	1/1:11,0:10:21.61:150,22,0	1/1:20,0:17:43.57:396,44,0	1/1:18,0:17:50.89:459,51,0	0/0:15,0:15:45.09:0,45,658	0/0:17,0:17:48.06:0,48,719	1/1:7,0:7:17.63:138,18,0	1/1:12,0:10:23.68:195,24,0	1/1:13,0:11:18.53:147,19,0	1/1:14,0:13:32.06:204,32,0	0/0:17,0:17:47.27:0,47,679	1/1:9,0:8:17.75:123,18,0	1/1:3,0:4:11.80:89,12,0	1/1:22,0:20:37.77:376,38,0	1/1:15,0:14:30.93:299,31,0	1/1:2,0:2:5.96:44,6,0	1/1:13,0:12:29.47:283,29,0	1/1:18,0:16:38.84:328,39,0	1/1:11,0:10:17.81:149,18,0	1/1:15,1:16:1.42:89,1,0	0/1:26,0:24:13.44:531,0,13	1/1:16,0:15:44.75:370,45,0	1/1:8,0:8:23.97:221,24,0
chr10	110626253	.	AT	A	931.98	PASS	AB=1.000;AC=42;AF=0.778;AN=54;BaseQRankSum=7.619;DP=430;FS=1.286;HRun=14;HaplotypeScore=127.6311;InbreedingCoeff=0.5321;MQ=63.03;MQ0=5;MQRankSum=-7.760;QD=2.95;ReadPosRankSum=3.050;VQSLOD=0.6628;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:9.13:27,9,0	0/1:6,0:6:7.49:7,0,72	0/0:33,1:17:2.13:0,2,123	0/0:26,0:15:18.84:0,19,100	0/1:32,0:30:20.47:66,0,20	1/1:15,0:14:22.43:97,22,0	1/1:11,0:10:10.68:45,11,0	1/1:20,0:17:12.92:38,13,0	1/1:18,0:17:28.41:81,28,0	0/0:14,1:15:6.44:0,6,201	0/0:17,1:18:9.44:0,9,225	1/1:7,0:7:8.55:32,9,0	1/1:12,0:10:13.23:58,13,0	1/1:13,0:11:7.34:26,7,0	1/1:14,0:13:7.42:21,7,0	0/0:17,1:17:9.41:0,9,216	1/1:9,0:8:3.79:10,4,0	1/1:4,0:4:3.87:10,4,0	1/1:22,0:20:17.13:57,17,0	1/1:15,0:14:19.97:57,20,0	./.	1/1:13,0:12:16.12:76,16,0	1/1:18,0:16:27.26:151,27,0	1/1:11,0:10:6.60:30,7,0	1/1:16,0:16:1.31:64,1,0	1/1:26,0:24:7.30:57,7,0	1/1:16,0:15:18.52:55,19,0	1/1:8,0:8:9.96:28,10,0
chr10	110626264	.	TTTTG	T	3543.15	PASS	AB=0.905;AC=25;AF=0.463;AN=54;BaseQRankSum=5.356;DP=361;FS=2.835;HRun=0;HaplotypeScore=124.3129;InbreedingCoeff=0.4494;MQ=55.74;MQ0=8;MQRankSum=-7.753;QD=19.15;ReadPosRankSum=1.337;VQSLOD=3.4515;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,5:7:14.98:239,15,0	0/0:4,0:4:12.04:0,12,276	0/0:27,0:11:24.33:0,24,315	0/0:21,0:9:15.39:0,15,147	0/0:30,0:28:64.96:0,65,964	0/0:12,0:11:30.02:0,30,410	0/0:12,0:9:20.89:0,21,264	1/1:6,9:11:25.59:322,26,0	1/1:5,12:16:48.06:620,48,0	0/0:11,0:11:33.06:0,33,691	0/0:13,0:13:33.10:0,33,756	0/1:6,0:5:1.89:2,0,18	0/1:10,0:9:9.03:9,0,21	0/1:10,0:8:7.27:7,0,25	1/1:12,0:11:1.48:101,1,0	0/0:13,0:12:33.08:0,33,728	1/1:4,3:6:5.77:90,6,0	1/1:5,1:4:11.98:129,12,0	0/1:11,6:14:28.80:306,0,29	1/1:3,13:14:30.99:435,31,0	./.	0/1:10,0:10:19.13:19,0,39	0/0:15,0:13:3.93:0,4,63	0/1:10,0:9:12.37:12,0,15	0/0:17,0:17:42.88:0,43,659	0/1:7,15:19:19.82:603,0,20	1/1:4,10:13:32.93:417,33,0	1/1:1,5:6:18.02:231,18,0
chr10	110626266	.	TTG	T	3190.18	PASS	AB=1.000;AC=34;AF=0.630;AN=54;BaseQRankSum=7.618;DP=349;FS=10.785;HRun=0;HaplotypeScore=110.5938;InbreedingCoeff=0.8550;MQ=54.10;MQ0=7;MQRankSum=-7.073;QD=14.91;ReadPosRankSum=2.273;VQSLOD=3.0365;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:14.85:108,15,0	0/0:5,0:5:14.65:0,15,183	0/0:25,0:10:19.50:0,19,195	0/1:21,0:9:3.23:3,0,114	0/0:25,0:23:21.27:0,21,372	0/0:12,0:11:17.58:0,18,137	0/0:12,0:9:20.64:0,21,146	1/1:13,0:9:23.92:190,24,0	1/1:17,0:16:47.78:371,48,0	0/0:11,0:11:29.82:0,30,411	0/0:14,0:14:32.95:0,33,473	1/1:6,0:5:14.77:128,15,0	1/1:9,0:8:20.92:183,21,0	1/1:11,0:9:16.34:110,16,0	1/1:3,9:11:30.03:348,30,0	0/0:13,0:12:30.01:0,30,433	1/1:7,0:6:5.95:46,6,0	1/1:6,0:4:11.73:76,12,0	0/1:15,0:12:2.17:175,0,2	1/1:16,0:14:29.89:242,30,0	./.	1/1:9,1:10:22.72:256,23,0	1/1:15,0:13:35.67:320,36,0	1/1:9,1:9:11.68:123,12,0	0/0:16,0:16:33.98:0,34,274	1/1:20,0:17:22.99:348,23,0	1/1:13,0:12:29.86:230,30,0	1/1:6,0:6:17.94:143,18,0
chr10	110626267	.	TG	T	2603.07	PASS	AB=0.955;AC=35;AF=0.648;AN=54;BaseQRankSum=6.920;DP=341;FS=7.879;HRun=2;HaplotypeScore=106.6349;InbreedingCoeff=0.8714;MQ=52.61;MQ0=7;MQRankSum=-8.783;QD=12.40;ReadPosRankSum=1.537;VQSLOD=2.0868;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:14.39:81,14,0	0/0:5,0:5:14.34:0,14,137	0/0:24,0:9:1.61:0,2,78	0/1:20,0:9:1.84:2,0,59	0/0:25,0:23:34.95:0,35,211	0/0:12,0:11:20.27:0,20,99	0/0:12,0:9:18.69:0,19,93	1/1:13,0:9:23.55:146,24,0	1/1:16,0:16:46.63:281,47,0	0/0:10,0:10:26.24:0,26,277	0/0:14,0:14:28.54:0,29,307	1/1:2,2:5:14.96:130,15,0	1/1:2,4:8:20.84:174,21,0	1/1:3,4:9:17.79:126,18,0	1/1:11,0:11:29.24:176,29,0	0/0:12,0:11:21.83:0,22,249	1/1:6,0:6:5.84:34,6,0	1/1:4,0:4:11.65:67,12,0	1/1:13,0:10:12.42:146,12,0	1/1:15,0:13:29.40:181,29,0	./.	1/1:4,5:9:23.94:223,24,0	1/1:2,13:13:36.04:375,36,0	1/1:3,5:9:11.89:99,12,0	0/0:15,0:15:19.12:0,19,138	1/1:20,0:17:46.92:285,47,0	1/1:13,0:12:29.22:171,29,0	1/1:6,0:6:17.71:111,18,0
chr10	110626272	.	CT	C	2469.13	PASS	AC=40;AF=0.741;AN=54;BaseQRankSum=7.244;DP=328;FS=3.709;HRun=8;HaplotypeScore=106.3689;InbreedingCoeff=0.6885;MQ=46.80;MQ0=7;MQRankSum=-6.490;QD=9.84;ReadPosRankSum=1.385;VQSLOD=2.3046;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,4:7:5.93:52,6,0	0/0:5,0:5:12:0,12,130	0/0:15,0:6:4.77:0,5,24	0/0:14,1:7:5.44:0,5,16	1/1:6,16:20:27.01:257,27,0	1/1:5,7:11:15.02:145,15,0	1/1:5,7:9:15.02:143,15,0	1/1:8,8:11:11.97:116,12,0	1/1:8,9:16:23.99:230,24,0	0/0:11,1:12:1.11:0,1,285	0/0:12,0:12:27.04:0,27,310	0/0:6,0:5:0:0,0,0	1/1:6,3:8:5.79:58,6,0	1/1:7,5:10:5.86:56,6,0	1/1:4,9:11:15:144,15,0	0/0:10,0:9:21.05:0,21,238	1/1:3,5:7:2.96:29,3,0	1/1:4,2:4:2.14:28,2,0	1/1:7,7:11:20.59:201,21,0	1/1:5,11:14:12:114,12,0	./.	1/1:5,6:10:9.01:86,9,0	1/1:7,8:13:8.97:86,9,0	1/1:4,5:8:11.75:114,12,0	1/1:5,7:12:15.02:144,15,0	1/1:9,11:17:30.03:283,30,0	1/1:4,10:13:18.01:173,18,0	1/1:0,6:6:18.03:172,18,0
chr10	110626355	.	CT	C	6740.81	PASS	AB=0.632;AC=43;AF=0.768;AN=56;BaseQRankSum=7.153;DP=416;FS=2.967;HRun=10;HaplotypeScore=113.3862;InbreedingCoeff=0.8707;MQ=51.96;MQ0=2;MQRankSum=-4.269;QD=18.99;ReadPosRankSum=2.849;VQSLOD=4.6614;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:50.98:442,51,0	0/0:2,0:2:6.02:0,6,66	0/0:16,0:8:7.96:0,8,104	0/0:11,0:8:19.84:0,20,170	1/1:6,10:16:23.99:208,24,0	1/1:1,19:20:50.98:442,51,0	1/1:1,9:10:23.99:208,24,0	1/1:5,13:19:37.90:308,38,0	1/1:1,13:14:32.99:286,33,0	0/0:16,0:16:42.09:0,42,449	0/0:9,0:9:21.05:0,21,229	1/1:0,13:13:38.99:338,39,0	1/1:2,16:17:38.91:329,39,0	1/1:2,10:12:29.92:251,30,0	1/1:1,10:11:29.99:260,30,0	0/0:7,0:7:21.05:0,21,224	1/1:3,16:19:41.99:364,42,0	1/1:1,12:13:29.97:256,30,0	1/1:1,7:8:17.93:148,18,0	1/1:4,25:29:71.59:609,72,0	1/1:0,10:10:17.99:156,18,0	0/1:5,7:11:5.74:89,0,6	1/1:3,18:21:38.95:338,39,0	1/1:1,13:14:29.92:251,30,0	1/1:4,17:21:41.98:364,42,0	1/1:3,22:25:62.96:546,63,0	1/1:5,17:22:50.96:441,51,0	1/1:3,4:7:11.98:104,12,0
chr10	110628369	.	A	AAAATAAATAAATAAAT	7642.72	PASS	AC=26;AF=0.542;AN=48;BaseQRankSum=-1.928;DP=337;FS=10.418;HRun=0;HaplotypeScore=122.8651;InbreedingCoeff=0.8143;MQ=56.98;MQ0=3;MQRankSum=-6.304;QD=38.80;ReadPosRankSum=-3.018;VQSLOD=2.9939;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,5:14:11.93:667,12,0	0/0:10,0:10:21.07:0,21,576	0/0:18,0:11:3.01:0,3,65	0/0:17,0:8:5.75:0,6,40	1/1:14,0:14:15.05:490,15,0	1/1:7,0:11:24.08:825,24,0	1/1:5,0:5:6.02:181,6,0	1/1:49,0:44:60.61:1396,61,0	1/1:5,0:9:3.01:209,3,0	0/0:10,0:10:12.04:0,12,425	0/0:16,0:16:21.07:0,21,841	0/0:3,0:3:6.02:0,6,264	0/0:5,0:5:9.03:0,9,397	0/0:5,0:5:12.04:0,12,390	0/0:9,0:9:18.05:0,18,656	0/0:10,0:10:18.06:0,18,711	1/1:15,3:19:15.05:650,15,0	1/1:6,9:17:6.02:456,6,0	1/1:15,0:15:27.09:805,27,0	1/1:7,4:13:12.04:531,12,0	./.	./.	0/0:11,0:11:15.04:0,15,478	./.	1/1:7,0:8:15.05:504,15,0	./.	1/1:16,0:16:21.06:475,21,0	1/1:2,3:6:5.79:454,6,0
chr10	110628395	.	A	AAT	1009.77	PASS	AB=0.907;AC=12;AF=0.214;AN=56;BaseQRankSum=4.992;DP=282;FS=27.344;HRun=0;HaplotypeScore=50.5455;InbreedingCoeff=-0.2878;MQ=61.74;MQ0=2;MQRankSum=-6.271;QD=6.43;ReadPosRankSum=-0.170;VQSLOD=1.2380;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:19.21:19,0,282	0/0:9,0:9:27.09:0,27,412	0/0:6,0:5:15.01:0,15,178	0/0:9,0:6:14.84:0,15,182	0/1:5,4:9:71.65:72,0,121	0/1:10,3:13:99:207,0,172	0/1:4,0:4:36.76:37,0,83	0/1:29,10:35:99:504,0,657	0/1:6,0:6:8.39:8,0,82	0/0:8,0:8:24.08:0,24,349	0/0:15,0:15:45.14:0,45,667	0/0:6,0:6:15.04:0,15,206	0/0:10,0:10:30.10:0,30,454	0/0:8,0:8:24.07:0,24,346	0/0:9,0:9:27.08:0,27,391	0/0:10,0:10:30.10:0,30,457	0/0:16,0:16:21.54:0,22,450	0/1:11,0:11:16.59:17,0,151	0/1:13,3:16:99:123,0,467	0/1:10,0:10:6.83:7,0,216	0/0:3,0:3:9.01:0,9,115	0/0:2,0:2:6.02:0,6,90	0/0:8,0:8:21.06:0,21,301	0/0:2,0:2:3:0,3,27	0/1:7,1:8:81.50:81,0,160	0/0:4,0:4:9.03:0,9,137	0/1:15,3:17:64.58:65,0,446	0/1:11,0:10:16.30:16,0,165
chr10	110628544	.	G	GT	6626.86	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-11.990;DP=530;FS=24.809;HRun=8;HaplotypeScore=45.3781;InbreedingCoeff=0.9932;MQ=66.47;MQ0=3;MQRankSum=-1.963;QD=26.19;ReadPosRankSum=0.164;VQSLOD=3.1048;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,24:32:50.72:817,51,0	0/0:7,0:7:18.01:0,18,165	0/0:18,0:13:15.04:0,15,203	0/0:20,0:17:44.99:0,45,404	0/0:16,0:16:48.03:0,48,439	0/0:17,0:17:48.03:0,48,439	0/0:11,0:11:21:0,21,192	1/1:14,18:32:23.67:516,24,0	1/1:1,20:21:51.15:589,51,0	0/0:17,0:17:48.01:0,48,434	0/0:11,0:11:24:0,24,219	0/0:16,1:17:16.43:0,16,404	0/0:23,0:23:66.02:0,66,599	0/0:13,0:13:39.02:0,39,357	0/0:28,0:28:75.02:0,75,682	0/0:17,0:17:45:0,45,405	1/1:5,24:29:78.05:871,78,0	1/1:1,29:30:75.22:865,75,0	1/1:9,14:23:23.66:509,24,0	1/1:3,14:18:42.11:475,42,0	1/1:3,14:17:39.09:437,39,0	0/0:12,0:12:33.02:0,33,302	0/0:12,0:12:33.02:0,33,302	0/0:21,0:21:59.99:0,60,541	0/0:17,0:16:44.98:0,45,401	1/1:0,18:18:51.14:578,51,0	1/1:2,19:20:54.16:623,54,0	1/1:2,10:11:30.09:346,30,0
chr10	110629623	.	CATGT	C	11620.07	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=18.618;DP=1117;FS=6.716;HRun=0;HaplotypeScore=191.5469;InbreedingCoeff=0.9577;MQ=59.35;MQ0=8;MQRankSum=0.103;QD=34.90;ReadPosRankSum=6.665;VQSLOD=4.1377;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:69.56:0,70,1702	0/0:16,0:16:48.15:0,48,1300	0/0:13,0:1:3.01:0,3,87	0/0:22,0:9:8.64:0,9,113	0/0:38,0:38:99:0,108,2702	0/0:33,0:33:99:0,99,2568	0/0:34,0:34:99:0,102,2533	0/0:47,0:47:99:0,132,3312	0/0:50,0:50:99:0,150,3651	0/0:71,0:71:99:0,214,5743	0/0:25,0:25:75.24:0,75,2051	1/1:0,49:49:99:2092,102,0	1/1:1,59:60:99:1969,99,0	1/1:1,51:52:69.24:1398,69,0	1/1:0,63:63:99:2168,106,0	0/0:66,0:66:99:0,199,5027	0/0:21,0:21:63.20:0,63,1647	0/0:19,0:19:57.16:0,57,1472	0/0:31,0:28:83.44:0,83,1741	0/0:32,0:32:93.29:0,93,2384	0/0:81,0:80:99:0,238,6034	1/1:0,43:43:64.47:1071,64,0	1/1:0,34:34:72.52:1353,73,0	1/1:11,21:32:84.09:1568,84,0	0/0:28,0:28:78.19:0,78,2096	0/0:56,0:56:99:0,168,4422	0/0:56,0:55:99:0,168,4208	0/0:15,0:15:42.13:0,42,1124
chr10	110629884	.	ACATGCATATGTGTGTATG	A	3580	PASS	AB=1.000;AC=31;AF=0.738;AN=42;BaseQRankSum=1.082;DP=1168;FS=8.590;HRun=0;HaplotypeScore=459.7766;InbreedingCoeff=0.6182;MQ=58.00;MQ0=8;MQRankSum=0.817;QD=5.18;ReadPosRankSum=3.827;VQSLOD=0.5975;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:21.05:389,21,0	0/0:19,0:19:21.07:0,21,613	./.	./.	./.	1/1:33,0:32:20.33:389,20,0	0/0:34,0:32:0:0,0,0	./.	1/1:55,0:55:30.09:581,30,0	0/0:76,0:75:58.44:0,58,1657	0/0:26,0:26:30.10:0,30,895	./.	1/1:62,0:62:11.96:146,12,0	1/1:71,0:71:3.01:41,3,0	1/1:70,0:70:6.02:97,6,0	0/0:72,0:72:78.25:0,78,2646	1/1:20,0:18:3.01:76,3,0	0/1:15,0:15:17.73:36,0,18	1/1:20,0:17:8.39:117,8,0	1/1:31,0:31:27.07:484,27,0	1/1:124,0:121:14.39:315,14,0	./.	./.	1/1:27,0:26:2.99:24,3,0	1/1:30,0:30:3.01:58,3,0	1/1:45,0:45:18.05:358,18,0	1/1:40,0:40:15.05:286,15,0	1/1:18,0:18:8.95:184,9,0
chr10	110629910	.	A	ATG	5554.50	PASS	AB=0.646;AC=5;AF=0.100;AN=50;BaseQRankSum=-10.938;DP=1040;FS=1.249;HRun=0;HaplotypeScore=135.6304;InbreedingCoeff=-0.0301;MQ=56.76;MQ0=22;MQRankSum=0.459;QD=22.58;ReadPosRankSum=3.528;VQSLOD=5.2144;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:57.16:0,57,740	0/0:14,0:14:42.12:0,42,544	./.	0/0:12,0:2:0.47:0,0,1	0/0:28,0:27:39.13:0,39,519	0/0:39,0:37:84.19:0,84,1055	0/0:34,0:32:66.18:0,66,833	0/0:39,0:24:54.15:0,54,688	0/0:42,0:42:90.26:0,90,1166	0/0:69,0:68:99:0,181,2344	0/0:32,0:31:87.24:0,87,1098	0/1:14,30:44:99:1055,0,125	0/1:33,27:60:99:1383,0,413	0/1:18,41:59:99:1348,0,144	0/1:26,29:55:99:1349,0,235	0/0:77,0:77:99:0,202,2630	0/0:16,0:14:14.96:0,15,200	0/0:17,0:17:26.10:0,26,459	0/0:20,0:15:45.15:0,45,609	0/0:25,0:25:69.20:0,69,888	0/0:105,0:98:99:0,193,2502	./.	./.	0/1:16,12:28:99:419,0,198	0/0:25,0:25:48.12:0,48,593	0/0:42,0:40:99:0,102,1330	0/0:25,0:25:69.23:0,69,916	0/0:16,0:16:33.07:0,33,437
chr10	110629928	.	A	ATG	3452.67	PASS	AB=0.701;AC=5;AF=0.104;AN=48;BaseQRankSum=-4.202;DP=973;FS=0.962;HRun=0;HaplotypeScore=148.6149;InbreedingCoeff=-0.1172;MQ=55.57;MQ0=29;MQRankSum=2.574;QD=15.55;ReadPosRankSum=-1.609;VQSLOD=3.3826;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:69.19:0,69,876	0/0:14,0:14:36.12:0,36,479	./.	./.	0/0:27,0:26:36.04:0,36,412	0/0:39,0:37:87.23:0,87,1111	0/0:33,0:31:72.24:0,72,957	0/0:32,0:14:24.07:0,24,307	0/0:37,0:37:96.23:0,96,1210	0/0:53,0:52:99:0,135,1772	0/0:27,0:26:66.18:0,66,846	0/1:24,9:33:99:373,0,453	0/1:21,27:48:99:928,0,373	0/1:40,13:53:99:842,0,499	0/1:27,26:54:99:836,0,432	0/0:70,0:70:99:0,187,2411	0/0:16,0:14:14.96:0,15,200	0/0:14,0:14:33.53:0,34,405	0/0:30,0:16:40.67:0,41,484	0/0:24,0:24:60.18:0,60,784	0/0:115,0:110:99:0,202,2544	./.	./.	0/1:12,20:32:99:474,0,134	0/0:25,0:25:42.14:0,42,559	0/0:39,0:36:93.27:0,93,1194	0/0:19,0:19:48.14:0,48,619	0/0:18,0:18:36.02:0,36,431
chr10	110629950	.	G	GTA	1856.53	PASS	AB=0.878;AC=15;AF=0.268;AN=56;BaseQRankSum=-2.191;DP=898;FS=1.051;HRun=0;HaplotypeScore=146.0990;InbreedingCoeff=-0.2620;MQ=56.29;MQ0=19;MQRankSum=0.912;QD=4.51;ReadPosRankSum=-8.451;VQSLOD=0.3021;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:26,4:29:99:250,0,558	0/0:17,0:17:51.16:0,51,756	1/1:7,0:3:2.74:12,3,0	0/0:25,0:8:3.48:0,3,42	0/0:21,0:21:9.02:0,9,116	0/1:26,5:30:99:216,0,813	0/0:26,0:24:72.24:0,72,1096	0/0:44,0:34:99:0,99,1456	0/1:32,3:35:99:335,0,657	0/0:50,0:48:99:0,140,2051	0/0:25,0:25:69.22:0,69,1021	0/0:21,5:26:54.13:0,54,757	0/1:37,4:41:99:113,0,945	0/0:37,4:41:43.70:0,44,1171	0/0:46,5:50:1.90:0,2,1195	0/0:59,0:59:99:0,166,2472	0/1:8,7:13:42.85:43,0,168	0/1:15,1:16:4.46:4,0,465	0/1:24,1:16:66.97:67,0,506	0/1:11,5:16:99:409,0,187	0/1:73,23:94:36:36,0,2537	0/0:33,0:33:12.04:0,12,181	0/0:29,0:29:10.28:0,10,138	0/0:36,2:37:48.30:0,48,980	0/1:14,7:20:21.80:22,0,468	0/1:40,1:39:99:163,0,1147	0/1:23,1:24:99:288,0,467	0/1:14,0:14:51.26:51,0,336
chr10	110629981	.	CGTGTGT	C	2223.07	PASS	AB=0.820;AC=21;AF=0.389;AN=54;BaseQRankSum=5.285;DP=915;FS=2.045;HRun=0;HaplotypeScore=221.3327;InbreedingCoeff=0.6317;MQ=54.73;MQ0=24;MQRankSum=-5.687;QD=5.61;ReadPosRankSum=1.099;VQSLOD=2.6042;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,3:31:2.89:37,0,3	0/0:14,0:15:12.62:0,13,279	./.	0/0:27,0:7:0:0,0,0	1/1:22,0:25:5.31:38,5,0	0/0:27,0:28:18.86:0,19,270	0/0:23,0:28:12.13:0,12,157	1/1:45,0:45:1.05:50,1,0	1/1:28,3:34:11.76:156,12,0	0/0:33,0:42:63.19:0,63,1468	0/0:15,0:20:7.08:0,7,91	0/0:29,0:28:27.56:0,28,714	0/0:47,0:49:14.89:0,15,1030	0/0:39,0:40:51.16:0,51,1085	0/0:54,0:56:67.52:0,68,1747	0/0:46,0:46:51.02:0,51,1220	0/1:10,3:14:7.34:150,0,7	0/1:14,4:18:42.39:259,0,42	1/1:19,2:19:6.02:122,6,0	1/1:13,7:21:0.04:0,0,0	1/1:89,1:87:17.18:152,17,0	0/0:32,0:35:42.14:0,42,899	0/0:22,0:24:20.02:0,20,458	0/0:40,0:43:66.19:0,66,1556	0/0:16,0:17:13.35:0,13,163	1/1:30,9:41:35.20:685,35,0	1/1:22,9:32:26.17:633,26,0	1/1:11,6:13:6.02:122,6,0
chr10	110630334	.	C	CGAT	15512.90	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-11.687;DP=644;FS=1.751;HRun=0;HaplotypeScore=98.3008;InbreedingCoeff=0.9953;MQ=81.92;MQ0=0;MQRankSum=-8.808;QD=62.30;ReadPosRankSum=0.369;VQSLOD=6.3650;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:26:63.22:1549,63,0	0/0:19,0:19:57.18:0,57,1030	0/0:19,0:19:49.41:0,49,886	0/0:20,0:20:54.18:0,54,966	0/0:28,0:28:81.28:0,81,1501	0/0:22,0:22:66.21:0,66,1190	0/0:34,0:34:99:0,102,1870	1/1:3,26:31:87.28:2041,87,0	1/1:0,26:27:78.27:1918,78,0	0/0:23,0:23:63.22:0,63,1174	0/0:23,0:23:66.23:0,66,1230	0/0:25,0:25:75.26:0,75,1392	0/0:16,0:16:48.16:0,48,894	0/0:22,0:22:63.20:0,63,1133	0/0:28,0:28:78.25:0,78,1421	0/0:33,0:33:99:0,99,1839	1/1:1,25:26:54.19:1329,54,0	1/1:1,7:8:24.08:590,24,0	1/1:10,9:19:51.13:1132,51,0	1/1:1,21:24:60.21:1472,60,0	1/1:1,20:22:51.18:1256,51,0	0/0:19,0:19:57.20:0,57,1063	0/0:26,0:26:75.24:0,75,1361	0/0:18,0:18:54.18:0,54,979	0/0:20,0:20:60.21:0,60,1119	1/1:3,28:31:37.32:2046,37,0	1/1:5,23:30:78.27:1884,78,0	1/1:0,5:5:12.04:296,12,0
chr10	110631766	.	AT	A	3116.15	PASS	AB=0.900;AC=11;AF=0.196;AN=56;BaseQRankSum=9.696;DP=631;FS=2.127;HRun=9;HaplotypeScore=67.6412;InbreedingCoeff=0.8840;MQ=75.96;MQ0=0;MQRankSum=-1.233;QD=20.37;ReadPosRankSum=-1.017;VQSLOD=3.9482;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:6,15:21:44.96:398,45,0	0/0:11,0:11:30.09:0,30,346	0/1:15,2:18:18.82:19,0,310	0/0:14,0:14:27.08:0,27,310	0/0:24,0:24:63.19:0,63,725	0/0:21,0:21:60.18:0,60,692	0/0:23,2:25:14.25:0,14,658	1/1:2,35:37:99:942,105,0	1/1:2,22:24:69.02:627,69,0	0/0:25,0:25:66.19:0,66,749	0/0:20,0:19:57.17:0,57,656	0/0:22,0:22:57.16:0,57,650	0/0:12,0:12:36.11:0,36,413	0/0:20,0:20:54.16:0,54,618	0/0:19,0:19:51.15:0,51,589	0/0:35,0:35:99:0,99,1116	1/1:4,26:30:84.02:760,84,0	1/1:2,21:23:60.03:549,60,0	0/0:22,0:22:57.09:0,57,627	0/0:33,0:34:96.24:0,96,1091	0/0:23,0:23:63.19:0,63,727	0/0:18,0:18:48.14:0,48,550	0/0:23,1:24:35.79:0,36,655	0/0:26,0:26:78.15:0,78,882	0/0:16,0:16:45.13:0,45,519	0/0:20,0:20:57.17:0,57,658	0/0:31,0:31:75.21:0,75,856	0/0:16,0:16:36.09:0,36,405
chr10	110631827	.	AT	A	6143.06	PASS	AB=0.891;AC=24;AF=0.429;AN=56;BaseQRankSum=12.765;DP=609;FS=1.392;HRun=10;HaplotypeScore=66.5484;InbreedingCoeff=0.8480;MQ=75.01;MQ0=1;MQRankSum=-1.481;QD=19.56;ReadPosRankSum=-1.191;VQSLOD=5.1968;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,24:33:46.60:622,47,0	0/0:12,0:12:33.08:0,33,357	0/0:11,0:11:11.63:0,12,203	0/1:15,1:15:17.29:17,0,56	0/0:26,0:26:72.18:0,72,788	0/0:21,0:21:48.09:0,48,518	0/0:15,0:15:42.09:0,42,447	1/1:3,27:30:47.79:644,48,0	1/1:4,12:17:43.98:361,44,0	0/0:29,0:29:42.65:0,43,673	0/0:12,0:11:24.06:0,24,265	0/0:25,0:25:63.17:0,63,697	0/0:19,0:19:48.13:0,48,531	0/0:25,0:25:66.16:0,66,721	0/0:17,0:17:51.14:0,51,564	0/0:24,0:26:65.84:0,66,692	1/1:5,30:35:89.95:777,90,0	1/1:2,16:18:47.99:417,48,0	1/1:2,18:20:53.95:462,54,0	1/1:2,17:19:47.98:416,48,0	1/1:2,31:33:89.98:781,90,0	0/0:16,0:16:42.11:0,42,465	0/0:23,0:23:60.12:0,60,650	0/1:17,4:21:50.07:50,0,410	0/0:18,0:18:42.11:0,42,458	1/1:2,25:27:14.61:581,15,0	1/1:1,29:30:80.98:703,81,0	1/1:2,13:15:35.88:312,36,0
chr10	110632206	.	CTT	C	3633.89	PASS	AB=0.720;AC=29;AF=0.518;AN=56;BaseQRankSum=3.726;DP=615;FS=8.895;HRun=16;HaplotypeScore=86.3777;InbreedingCoeff=0.7912;MQ=72.22;MQ0=2;MQRankSum=1.973;QD=9.90;ReadPosRankSum=6.840;VQSLOD=1.6234;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,17:32:13.60:430,14,0	0/0:10,0:10:18.06:0,18,235	0/1:16,1:13:16.43:16,0,38	0/0:19,0:16:12.01:0,12,117	1/1:8,2:27:40.46:201,40,0	1/1:9,0:21:35.53:152,36,0	1/1:3,0:14:27.40:117,27,0	0/1:18,14:36:16.78:229,0,17	1/1:7,11:18:23.72:200,24,0	0/0:19,0:22:27.11:0,27,368	0/0:20,0:25:61.75:0,62,646	0/0:16,0:19:47.96:0,48,494	0/0:9,0:17:23.95:0,24,237	0/0:11,0:21:24.67:0,25,239	0/0:9,0:24:36.05:0,36,367	0/0:27,0:31:75.21:0,75,837	1/1:6,14:20:31.59:256,32,0	1/1:3,19:24:23.17:358,23,0	1/1:17,15:33:29.10:349,29,0	1/1:10,15:26:41.38:337,41,0	1/1:7,13:21:29.59:292,30,0	0/0:5,0:15:23.93:0,24,209	0/0:10,0:24:39.90:0,40,379	0/0:7,0:21:18.03:0,18,192	1/1:5,1:18:27.51:131,28,0	0/1:7,9:17:4.45:171,0,4	1/1:15,14:32:39.62:308,40,0	1/1:2,6:8:11.73:87,12,0
chr10	110633166	.	GTA	G	251.64	PASS	AB=0.912;AC=11;AF=0.204;AN=54;BaseQRankSum=3.185;DP=448;FS=9.081;HRun=0;HaplotypeScore=156.9514;InbreedingCoeff=0.2623;MQ=51.17;MQ0=2;MQRankSum=-2.473;QD=1.98;ReadPosRankSum=-2.229;VQSLOD=1.7840;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,2:14:3.48:45,3,0	0/0:12,0:12:36.12:0,36,599	0/0:12,0:4:5.92:0,6,39	0/0:7,0:4:2.95:0,3,19	0/0:35,0:34:69.19:0,69,1151	0/0:15,0:15:27.04:0,27,422	0/0:8,0:8:18.05:0,18,278	0/1:27,0:27:99:128,0,176	1/1:9,4:13:3.57:12,4,0	0/0:20,0:20:57.14:0,57,922	0/0:23,0:23:57.17:0,57,915	0/0:19,0:19:33.08:0,33,564	0/0:26,0:26:41.82:0,42,798	0/0:22,0:22:30.03:0,30,453	0/0:20,0:20:36.11:0,36,591	0/0:22,0:22:66.18:0,66,1040	0/1:10,2:12:1.64:33,0,2	1/1:8,0:8:2.31:7,2,0	0/1:12,0:12:38.14:64,0,38	0/0:7,3:10:1.25:0,1,3	./.	0/0:5,0:5:6.02:0,6,103	0/0:19,0:19:36.10:0,36,589	0/0:12,0:12:6.02:0,6,103	0/0:23,0:23:48.15:0,48,787	0/1:19,1:20:27.83:28,0,73	0/1:14,7:21:38.02:70,0,38	0/0:8,0:8:14.11:0,14,81
chr10	110633168	.	A	ATATG	5102.89	PASS	AB=0.571;AC=19;AF=0.352;AN=54;BaseQRankSum=4.772;DP=461;FS=2.164;HRun=0;HaplotypeScore=165.6955;InbreedingCoeff=0.7927;MQ=52.38;MQ0=1;MQRankSum=-8.820;QD=34.02;ReadPosRankSum=-2.540;VQSLOD=4.6037;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,7:15:11.46:204,11,0	0/0:13,0:13:39.12:0,39,680	0/0:13,0:6:3.34:0,3,21	0/0:9,0:5:2.95:0,3,19	0/0:35,0:34:69.05:0,69,1295	0/0:15,0:15:26.92:0,27,487	0/0:8,0:8:18.05:0,18,300	1/1:3,23:29:73.40:1289,73,0	1/1:9,4:14:11.67:271,12,0	0/0:20,0:20:60.19:0,60,1043	0/0:24,0:24:63.19:0,63,1092	0/0:19,0:19:33.26:0,33,626	0/0:26,0:26:51.11:0,51,956	0/0:21,0:21:29.39:0,29,530	0/0:20,0:20:36.01:0,36,651	0/0:22,0:22:66.21:0,66,1203	1/1:5,7:12:23.97:542,24,0	1/1:1,7:8:18.06:484,18,0	1/1:6,6:12:31.92:553,32,0	1/1:8,1:10:3.01:81,3,0	./.	0/0:6,0:6:5.95:0,6,114	0/0:19,0:19:38.58:0,39,690	0/0:12,0:12:5.45:0,5,113	0/0:23,0:23:44.33:0,44,810	0/1:5,13:20:39.04:757,0,39	1/1:13,7:22:27.78:526,28,0	1/1:4,3:8:18.95:395,19,0
chr10	110633206	.	TATACATACATAC	T	3211.39	PASS	AB=0.694;AC=22;AF=0.423;AN=52;BaseQRankSum=7.588;DP=537;FS=7.060;HRun=0;HaplotypeScore=218.5147;InbreedingCoeff=0.4782;MQ=53.78;MQ0=7;MQRankSum=-10.105;QD=12.16;ReadPosRankSum=-4.676;VQSLOD=0.9151;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:19:0.53:1,0,47	0/0:18,0:18:45.15:0,45,2293	0/0:17,0:7:3.01:0,3,39	./.	0/0:17,0:34:59.77:0,60,1598	0/0:6,0:18:24.08:0,24,700	0/0:7,0:15:21.07:0,21,572	0/0:23,0:22:18.06:0,18,337	0/1:6,0:17:13.27:13,0,40	0/0:25,0:25:51.18:0,51,2719	0/0:21,0:21:39.12:0,39,2075	1/1:9,18:27:21.77:645,22,0	1/1:12,20:32:36.11:1234,36,0	1/1:7,18:25:14.66:519,15,0	1/1:9,23:32:18.06:617,18,0	0/0:27,0:28:69.24:0,69,3680	0/0:6,0:9:6.02:0,6,98	0/0:10,0:10:8.93:0,9,64	0/1:10,0:13:4.82:5,0,41	0/1:3,0:12:1:1,0,48	1/1:8,0:8:0.47:1,0,0	1/1:2,7:9:6:208,6,0	1/1:7,11:18:2.52:19,3,0	1/1:10,6:16:2.49:103,2,0	0/0:13,0:26:36.12:0,36,916	0/1:9,0:11:2.61:3,0,103	0/1:10,0:24:9.33:9,0,18	./.
chr10	110634413	.	G	GAT	3994.98	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-13.514;DP=667;FS=4.773;HRun=0;HaplotypeScore=107.3740;InbreedingCoeff=0.9841;MQ=68.83;MQ0=0;MQRankSum=-0.382;QD=39.55;ReadPosRankSum=-0.457;VQSLOD=5.1473;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:78.22:0,78,974	0/0:15,0:15:42.14:0,42,541	0/0:10,0:9:11.24:0,11,114	0/0:12,0:12:20.66:0,21,216	1/1:1,27:28:78.27:1315,78,0	1/1:2,24:28:63.22:1063,63,0	1/1:1,13:14:30.10:506,30,0	0/0:21,0:21:48.15:0,48,605	0/0:31,0:31:81.23:0,81,1013	0/0:24,0:24:60.19:0,60,771	0/0:24,0:24:69.22:0,69,888	0/0:19,0:19:54.15:0,54,667	0/0:26,0:26:72.23:0,72,927	0/0:23,0:23:60.19:0,60,772	0/0:33,0:33:90.29:0,90,1156	0/0:29,0:29:78.25:0,78,1004	0/0:37,0:37:99:0,105,1334	0/0:20,0:20:54.18:0,54,695	0/0:15,0:15:36.11:0,36,451	0/0:31,0:31:87.28:0,87,1119	0/0:33,0:33:87.28:0,87,1119	0/0:27,0:27:72.22:0,72,914	0/0:26,0:26:75.24:0,75,964	0/0:21,0:21:60.18:0,60,757	1/1:6,24:31:66.23:1110,66,0	0/0:26,0:26:69.22:0,69,887	0/0:26,0:25:75.24:0,75,962	0/0:5,0:5:15.05:0,15,193
chr10	110635185	.	AGT	A	1240.92	PASS	AB=0.888;AC=11;AF=0.196;AN=56;BaseQRankSum=-2.133;DP=684;FS=3.928;HRun=0;HaplotypeScore=124.4819;InbreedingCoeff=0.4704;MQ=58.09;MQ0=13;MQRankSum=6.431;QD=10.17;ReadPosRankSum=3.562;VQSLOD=3.5646;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:41:11.99:0,12,103	0/1:4,1:6:16.80:17,0,169	0/0:40,0:13:20.76:0,21,248	0/0:39,0:15:17.45:0,17,172	1/1:3,12:16:29.92:327,30,0	1/1:7,14:21:38.95:432,39,0	1/1:8,9:17:12.04:139,12,0	0/0:37,0:36:38.86:0,39,425	0/0:6,0:15:11.99:0,12,103	0/1:23,0:24:73.26:73,0,445	0/1:9,2:11:19.79:20,0,172	0/0:9,0:21:12.22:0,12,109	0/0:22,0:22:19.57:0,20,220	0/0:8,0:22:8.99:0,9,76	0/0:28,0:26:8.89:0,9,117	0/0:25,1:26:10.32:0,10,609	0/0:17,0:33:8.85:0,9,64	0/0:10,0:19:6:0,6,52	0/0:17,0:21:20.94:0,21,188	0/0:10,0:20:6.41:0,6,60	0/0:19,0:30:8.97:0,9,71	0/0:22,0:18:3.01:0,3,42	0/0:20,0:20:3.48:0,3,33	0/0:23,0:23:3:0,3,26	1/1:9,17:26:35.94:397,36,0	0/0:22,0:35:41.34:0,41,382	0/0:10,0:28:35.97:0,36,336	0/0:3,0:11:6:0,6,52
chr10	110638304	.	G	GA	7091.08	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-6.040;DP=464;FS=1.786;HRun=10;HaplotypeScore=54.3498;InbreedingCoeff=0.8620;MQ=71.10;MQ0=6;MQRankSum=-1.379;QD=19.43;ReadPosRankSum=1.710;VQSLOD=5.6513;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,16:22:8.44:295,8,0	0/0:7,0:7:8.98:0,9,72	0/0:14,0:9:5.05:0,5,92	0/0:18,0:15:22.53:0,23,143	1/1:5,14:20:38.85:374,39,0	1/1:2,9:11:24.06:256,24,0	1/1:4,13:17:34.33:355,34,0	1/1:9,11:18:29.29:293,29,0	1/1:2,8:10:18.05:192,18,0	0/0:23,0:24:55.97:0,56,449	0/0:17,0:16:12.97:0,13,234	1/1:0,7:6:12.03:128,12,0	1/1:4,6:10:12.03:127,12,0	1/1:4,16:20:51.12:536,51,0	1/1:1,19:21:50.96:526,51,0	0/0:18,0:18:35.94:0,36,293	1/1:3,24:28:38.35:597,38,0	1/1:5,32:37:43.96:878,44,0	1/1:2,11:12:30.02:292,30,0	1/1:2,10:12:24.02:240,24,0	1/1:3,8:10:12.03:128,12,0	1/1:5,12:17:24.06:256,24,0	1/1:3,14:17:8.23:295,8,0	1/1:1,14:15:33.08:352,33,0	1/1:3,13:16:18.05:192,18,0	1/1:3,12:15:8.42:286,8,0	1/1:3,16:20:44.95:461,45,0	1/1:1,4:5:3.01:32,3,0
chr10	110638693	.	A	AGTATGTGTGTGT	5361.33	PASS	AB=0.987;AC=17;AF=0.304;AN=56;BaseQRankSum=9.277;DP=620;FS=4.337;HRun=0;HaplotypeScore=232.1660;InbreedingCoeff=-0.2543;MQ=58.95;MQ0=9;MQRankSum=-7.869;QD=14.61;ReadPosRankSum=-3.837;VQSLOD=3.0160;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:23.86:0,24,192	0/0:7,0:7:12.02:0,12,275	0/0:31,0:22:31.22:0,31,332	0/0:23,0:16:18.47:0,18,168	0/0:30,0:30:52.81:0,53,747	0/0:18,0:17:35.85:0,36,694	0/0:28,0:28:58.49:0,58,1087	0/1:30,0:29:99:130,0,296	1/1:22,0:22:14.96:428,15,0	0/0:29,0:29:74.58:0,75,1000	0/0:8,0:8:15.05:0,15,535	0/1:23,0:23:73.35:449,0,73	0/1:12,0:12:85.87:86,0,88	0/1:19,0:19:95.40:187,0,95	0/1:22,0:22:99:130,0,165	0/0:23,0:23:42.07:0,42,885	0/1:27,0:27:99:580,0,108	0/1:24,0:24:99:748,0,197	0/1:30,0:28:99:387,0,242	0/1:16,0:15:35.92:152,0,36	0/1:30,0:30:76.74:77,0,186	0/1:13,0:13:76.84:77,0,169	0/1:14,0:14:76.08:231,0,76	0/1:19,5:25:1.60:2,0,102	0/0:20,0:20:45.07:0,45,810	0/1:25,0:25:14.65:814,0,15	0/1:35,0:35:99:883,0,111	0/0:7,0:7:20.92:0,21,177
chr10	110638696	.	ATG	A	692.58	PASS	AB=0.850;AC=8;AF=0.143;AN=56;BaseQRankSum=-1.052;DP=649;FS=1.577;HRun=0;HaplotypeScore=108.9525;InbreedingCoeff=0.1978;MQ=57.60;MQ0=10;MQRankSum=3.801;QD=5.41;ReadPosRankSum=0.682;VQSLOD=3.0053;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:5.99:0,6,50	0/1:6,1:7:24.13:24,0,81	0/0:32,0:22:2.98:0,3,22	0/0:22,0:14:3.48:0,3,43	1/1:14,14:29:20.91:269,21,0	1/1:8,13:21:10.91:200,11,0	0/1:14,12:26:9.59:303,0,10	0/0:32,0:30:22:0,22,144	0/0:21,0:21:8.02:0,8,56	0/0:27,0:28:1.23:0,1,264	0/0:8,0:8:15.05:0,15,226	0/0:8,0:28:12.46:0,12,102	0/0:6,0:19:3:0,3,26	0/0:19,0:19:13.78:0,14,100	0/0:12,0:31:3:0,3,26	0/1:20,3:23:27.27:27,0,389	0/0:29,0:29:15.78:0,16,127	0/0:23,0:23:23.79:0,24,251	0/0:30,0:28:18.09:0,18,138	0/0:16,0:15:3.01:0,3,41	0/0:31,0:31:6:0,6,53	0/0:10,0:15:6:0,6,51	0/0:14,0:14:5.93:0,6,65	0/0:25,0:25:2.77:0,3,25	0/1:20,1:21:0.23:0,0,356	0/0:26,0:26:53.54:0,54,488	0/0:35,0:34:38.02:0,38,334	0/0:7,0:7:6.12:0,6,59
chr10	110638966	.	TA	T	6255.05	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=13.690;DP=516;FS=5.141;HRun=6;HaplotypeScore=50.0199;InbreedingCoeff=0.9615;MQ=60.50;MQ0=1;MQRankSum=-0.725;QD=27.31;ReadPosRankSum=-0.514;VQSLOD=4.8096;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:33:86.45:907,86,0	0/0:8,0:8:24.08:0,24,308	0/0:3,0:3:8.95:0,9,77	0/0:3,0:3:2.98:0,3,21	0/0:36,0:36:99:0,102,1249	0/0:18,0:18:51.15:0,51,642	0/0:13,0:13:39.10:0,39,474	1/1:1,32:32:93.21:980,93,0	1/1:0,16:16:33.08:354,33,0	0/0:26,0:25:72.22:0,72,903	0/0:20,0:19:54.18:0,54,694	0/0:24,0:24:63.20:0,63,809	0/0:25,0:25:75.17:0,75,917	0/0:14,0:14:39.13:0,39,501	0/0:26,0:26:78.22:0,78,963	0/0:19,0:19:48.16:0,48,617	1/1:1,21:22:46.69:539,47,0	1/1:0,19:19:51.13:546,51,0	1/1:4,20:23:35.24:545,35,0	1/1:0,15:15:45.08:470,45,0	1/1:0,9:9:27.07:289,27,0	0/0:9,0:9:27.09:0,27,346	0/0:10,0:10:27.09:0,27,347	0/0:10,0:10:27.09:0,27,347	0/0:23,0:23:69.22:0,69,875	1/1:1,31:32:54.65:918,55,0	1/1:2,20:22:54.14:578,54,0	1/1:0,4:4:12.03:128,12,0
chr10	110639717	.	TCTCTCTC	T	353.41	PASS	AB=0.846;AC=10;AF=0.179;AN=56;BaseQRankSum=8.689;DP=523;FS=2.072;HRun=0;HaplotypeScore=131.4580;InbreedingCoeff=0.5160;MQ=62.74;MQ0=14;MQRankSum=0.916;QD=3.53;ReadPosRankSum=3.731;VQSLOD=2.5070;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:60.19:0,60,1179	0/0:7,0:7:18.06:0,18,243	0/0:18,0:14:37.34:0,37,418	0/0:19,0:8:15.03:0,15,170	0/0:24,0:24:54.17:0,54,661	0/0:23,0:23:63.10:0,63,1192	0/0:12,0:11:27.08:0,27,489	0/0:43,0:43:99:0,112,1537	0/0:17,0:17:42.11:0,42,769	0/0:21,0:18:41.41:0,41,728	0/0:8,0:8:18.53:0,19,284	0/1:13,0:15:11.27:11,0,35	0/1:10,2:12:3.24:88,0,3	0/1:9,3:13:10.71:89,0,11	1/1:8,3:11:14.58:158,15,0	0/0:16,0:15:42.14:0,42,960	0/0:26,0:23:57.95:0,58,1116	0/0:14,0:14:36.12:0,36,738	0/0:22,0:22:57.18:0,57,1212	0/0:26,0:26:45.94:0,46,682	0/0:26,0:24:43.95:0,44,717	1/1:13,2:15:7.99:97,8,0	1/1:9,1:10:5.46:46,5,0	0/1:21,2:23:13.90:14,0,26	0/0:20,0:20:42.13:0,42,692	0/0:20,0:20:53.38:0,53,851	0/0:25,0:23:63.10:0,63,1184	0/0:8,0:6:15.05:0,15,353
chr10	110640485	.	AT	A	4168.01	PASS	AB=0.608;AC=40;AF=0.714;AN=56;BaseQRankSum=5.603;DP=619;FS=5.890;HRun=15;HaplotypeScore=89.6249;InbreedingCoeff=0.5033;MQ=76.93;MQ0=1;MQRankSum=-0.032;QD=8.63;ReadPosRankSum=4.216;VQSLOD=3.0863;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,24:39:19.14:337,0,19	0/0:8,0:9:26.81:0,27,217	0/0:39,1:21:0.80:0,1,104	0/0:27,0:18:4.50:0,4,50	1/1:8,19:31:35.21:325,35,0	1/1:6,24:31:24.19:380,24,0	1/1:3,7:10:6.71:118,7,0	1/1:14,16:31:0.35:192,0,0	1/1:3,10:13:5.62:149,6,0	0/0:17,0:21:38.60:0,39,309	0/0:18,1:20:28.56:0,29,362	1/1:5,0:23:30.45:88,30,0	1/1:3,0:15:22.34:65,22,0	1/1:5,0:14:16.28:47,16,0	1/1:2,0:21:32.58:94,33,0	0/0:15,0:19:32.80:0,33,270	1/1:9,20:29:56.03:365,56,0	1/1:2,22:24:62.06:404,62,0	1/1:10,14:25:25.58:270,26,0	1/1:4,12:18:13.18:197,13,0	1/1:2,4:7:7.93:44,8,0	1/1:4,0:21:26.34:76,26,0	1/1:3,0:19:35.08:103,35,0	1/1:4,0:29:40.62:118,41,0	0/1:6,17:24:20.82:255,0,21	1/1:6,15:22:42.35:288,42,0	0/1:11,16:30:12.34:210,0,12	0/1:3,4:7:32.82:43,0,33
chr10	110641776	.	TTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	T	3145.06	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=6.139;DP=638;FS=0.000;HRun=0;HaplotypeScore=404.8674;InbreedingCoeff=0.8143;MQ=63.87;MQ0=16;MQRankSum=-3.659;QD=43.68;ReadPosRankSum=-0.130;VQSLOD=1.0264;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:40:17.80:0,18,943	./.	0/0:39,0:22:9.03:0,9,259	0/0:42,0:21:9.89:0,10,177	1/1:15,7:23:20.99:913,21,0	1/1:6,7:14:18.06:1359,18,0	1/1:22,0:22:6.02:100,6,0	0/0:44,0:42:26.54:0,27,1150	0/0:21,0:21:25.01:0,25,2016	0/0:14,0:14:21.07:0,21,1720	0/0:10,0:10:3.01:0,3,298	0/0:24,0:25:43.96:0,44,2404	0/0:21,0:25:42.62:0,43,2605	0/0:9,0:13:21.07:0,21,1345	0/0:16,0:16:23.84:0,24,1102	0/0:22,0:22:48.64:0,49,4018	0/0:17,0:17:27.56:0,28,2571	0/0:19,0:19:21.54:0,22,1119	0/0:23,0:23:27.09:0,27,1016	0/0:25,0:24:2.71:0,3,23	0/0:36,0:35:9.41:0,9,315	0/0:17,0:16:23.87:0,24,1244	0/0:20,0:19:27.08:0,27,1523	0/0:25,0:33:39.13:0,39,2746	1/1:5,8:13:12.04:920,12,0	0/0:23,0:23:35.32:0,35,2422	0/0:24,0:24:42.14:0,42,2160	0/0:10,0:10:13.82:0,14,452
chr10	110641846	.	C	CACAACTG	18085.88	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-3.931;DP=543;FS=8.304;HRun=0;HaplotypeScore=151.4770;InbreedingCoeff=0.9993;MQ=77.80;MQ0=0;MQRankSum=-15.229;QD=84.12;ReadPosRankSum=-5.541;VQSLOD=3.3354;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:10,24:35:81.28:2642,81,0	0/0:11,0:11:33.11:0,33,824	0/0:24,0:20:54.18:0,54,1264	0/0:26,0:25:62.84:0,63,1417	0/0:20,0:20:54.19:0,54,1346	0/0:17,0:17:45.15:0,45,1114	0/0:14,0:14:42.14:0,42,1014	1/1:14,11:28:75.22:2470,75,0	1/1:4,9:15:33.11:1220,33,0	0/0:12,0:12:30.10:0,30,703	0/0:10,0:10:27.09:0,27,672	0/0:23,0:23:51.18:0,51,1268	0/0:30,0:30:90.31:0,90,2237	0/0:25,0:25:61.72:0,62,1405	0/0:26,0:26:72.23:0,72,1743	0/0:24,0:24:66.23:0,66,1630	1/1:8,13:23:48.16:1635,48,0	1/1:3,11:14:42.14:1595,42,0	1/1:10,7:20:60.19:1942,60,0	1/1:4,9:14:39.13:1293,39,0	1/1:8,13:23:36.12:1327,36,0	0/0:13,0:13:36.11:0,36,849	0/0:13,0:13:36.11:0,36,847	0/0:23,0:23:45.09:0,45,997	0/0:16,0:16:39.13:0,39,968	1/1:4,8:13:36.12:1215,36,0	1/1:5,14:20:48.16:1856,48,0	1/1:3,6:9:24.08:892,24,0
chr10	110642578	.	TA	T	2166.01	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.568;DP=644;FS=3.822;HRun=9;HaplotypeScore=61.4804;InbreedingCoeff=0.9709;MQ=67.45;MQ0=0;MQRankSum=-1.231;QD=21.24;ReadPosRankSum=1.966;VQSLOD=4.6667;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,129,1428	0/0:10,0:10:30.09:0,30,346	0/0:15,0:15:27.05:0,27,275	0/0:12,0:10:6.23:0,6,162	1/1:1,31:32:93.01:843,93,0	1/1:1,19:20:51.03:467,51,0	1/1:1,24:25:54.03:494,54,0	0/0:24,0:24:60.15:0,60,680	0/0:22,0:22:60.17:0,60,684	0/0:24,0:24:63.18:0,63,719	0/0:24,0:24:63.18:0,63,723	0/0:26,0:26:66.19:0,66,751	0/0:16,0:16:42.12:0,42,480	0/0:15,0:15:36.09:0,36,406	0/0:36,0:36:90.26:0,90,1030	0/0:19,0:19:48.14:0,48,554	0/0:32,0:32:87.26:0,87,1004	0/0:17,0:17:36.11:0,36,413	0/0:29,0:29:78.23:0,78,900	0/0:29,0:29:75.22:0,75,866	0/0:26,0:26:72.20:0,72,821	0/0:16,0:16:45.11:0,45,499	0/0:24,0:24:66.18:0,66,752	0/0:26,0:26:68:0,68,788	1/1:2,23:25:57.03:522,57,0	0/0:26,0:26:66.18:0,66,753	0/0:19,0:19:54.16:0,54,623	0/0:8,0:8:21.06:0,21,242
chr10	110643415	.	TAC	T	635.95	PASS	AB=0.687;AC=9;AF=0.167;AN=54;BaseQRankSum=-0.732;DP=477;FS=8.231;HRun=0;HaplotypeScore=78.3781;InbreedingCoeff=0.3696;MQ=58.81;MQ0=9;MQRankSum=1.301;QD=7.39;ReadPosRankSum=-0.263;VQSLOD=2.2235;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:8.99:0,9,75	0/1:5,3:8:18.78:19,0,204	./.	0/0:30,0:9:6.02:0,6,82	0/1:7,14:23:35.44:275,0,35	1/1:9,9:18:15.04:166,15,0	1/1:6,7:13:15.04:166,15,0	0/0:25,0:25:17.93:0,18,164	0/0:8,0:9:2.59:0,3,11	0/0:21,0:21:0.15:0,0,245	0/0:15,0:16:15.72:0,16,332	0/0:7,0:13:17.82:0,18,168	0/0:2,0:9:12.02:0,12,141	0/0:4,0:17:27.02:0,27,270	0/0:5,0:15:21:0,21,184	0/0:14,0:15:10.13:0,10,347	0/0:21,0:27:37.99:0,38,357	0/0:13,0:18:24.03:0,24,254	0/0:18,0:19:11.92:0,12,109	0/0:12,0:20:5.60:0,6,42	0/0:9,0:12:3:0,3,26	0/0:5,0:5:11.98:0,12,133	0/0:10,0:11:0.04:0,0,60	0/1:5,3:8:24.18:24,0,57	1/1:4,12:16:12.03:133,12,0	0/0:19,0:26:58.94:0,59,486	0/0:15,0:24:25.35:0,25,188	0/0:13,0:19:9:0,9,78
chr10	110645203	.	T	TTTTTTTTC	9849.58	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=2.921;DP=542;FS=12.191;HRun=0;HaplotypeScore=157.4223;InbreedingCoeff=0.6962;MQ=58.37;MQ0=12;MQRankSum=-6.392;QD=23.73;ReadPosRankSum=0.933;VQSLOD=4.0285;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:21:39.34:622,39,0	0/0:5,0:5:11.94:0,12,198	0/0:31,0:15:16.61:0,17,333	0/0:27,0:15:12.54:0,13,178	0/1:33,0:33:88.40:412,0,88	1/1:21,0:21:8.90:156,9,0	1/1:9,0:9:17.67:176,18,0	1/1:37,0:37:23.53:855,24,0	1/1:12,0:12:29.91:491,30,0	0/0:24,0:23:29.69:0,30,688	0/0:19,0:18:18.27:0,18,333	1/1:2,7:15:6.48:158,6,0	1/1:14,2:16:21.64:835,22,0	1/1:2,8:13:5.99:153,6,0	1/1:6,8:22:24.07:660,24,0	0/0:21,0:20:30.34:0,30,793	1/1:16,0:15:35.90:626,36,0	1/1:14,0:11:12.60:121,13,0	1/1:19,0:19:34.29:492,34,0	1/1:23,0:23:32.86:597,33,0	1/1:2,0:2:3.01:72,3,0	1/1:7,2:9:8.87:253,9,0	1/1:4,7:19:9.29:192,9,0	1/1:11,1:11:15.96:381,16,0	0/1:23,0:23:24.49:276,0,24	1/1:38,0:38:80.74:1128,81,0	1/1:29,0:27:56.79:987,57,0	1/1:6,0:5:15.01:206,15,0
chr10	110645223	.	C	CT	946.72	PASS	AB=0.934;AC=22;AF=0.407;AN=54;BaseQRankSum=-0.383;DP=540;FS=0.711;HRun=12;HaplotypeScore=88.1556;InbreedingCoeff=0.3491;MQ=38.07;MQ0=42;MQRankSum=-2.310;QD=3.04;ReadPosRankSum=-0.465;VQSLOD=0.1783;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,7:22:2.36:5,2,0	0/0:8,0:7:8.04:0,8,80	0/0:19,0:4:2.97:0,3,22	0/0:18,0:7:4.89:0,5,23	0/1:27,0:24:4.18:4,0,31	0/0:21,0:20:8.39:0,8,61	0/0:10,0:9:5.79:0,6,44	0/1:27,8:36:28.60:148,0,29	1/1:13,2:16:10.60:96,11,0	0/1:21,1:22:20.55:21,0,74	0/0:16,3:17:7.57:0,8,63	0/0:18,0:18:12.80:0,13,98	0/1:18,1:18:16.31:16,0,73	0/0:16,0:16:11.91:0,12,87	0/0:20,0:23:13.06:0,13,80	0/1:23,1:22:39.70:40,0,69	1/1:14,5:17:12.96:119,13,0	1/1:12,3:11:4.72:33,5,0	0/1:13,1:13:11.82:17,0,12	1/1:18,4:22:7.56:62,8,0	./.	0/0:15,0:11:5.74:0,6,44	0/0:19,0:17:11.67:0,12,77	0/0:16,0:13:11.77:0,12,73	0/0:21,1:22:2.40:0,2,21	1/1:20,11:28:35.74:321,36,0	1/1:22,5:26:19.41:144,19,0	1/1:8,1:8:13.50:98,13,0
chr10	110646026	.	ATTTATTTATTT	A	834.85	PASS	AB=0.760;AC=8;AF=0.167;AN=48;BaseQRankSum=7.675;DP=179;FS=1.875;HRun=0;HaplotypeScore=71.6010;InbreedingCoeff=-0.1470;MQ=46.86;MQ0=14;MQRankSum=-5.510;QD=11.44;ReadPosRankSum=3.724;VQSLOD=1.5319;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,1:8:27.34:27,0,81	0/0:4,0:4:12.04:0,12,433	./.	./.	0/0:3,0:3:9.03:0,9,256	0/0:10,0:10:30.10:0,30,1384	./.	0/0:34,0:25:66.01:0,66,409	0/1:1,3:4:0.42:243,0,0	0/0:3,0:3:9.03:0,9,256	0/0:7,0:7:21.06:0,21,536	0/0:5,0:5:15.05:0,15,532	0/0:1,0:1:3.01:0,3,178	0/0:2,0:2:6.02:0,6,217	0/0:6,0:6:18.06:0,18,942	0/0:4,0:4:12.04:0,12,520	0/1:11,4:15:82.34:272,0,82	0/1:15,3:18:99:250,0,153	0/1:6,0:10:79.65:80,0,98	0/1:3,0:4:13.03:13,0,39	0/0:5,0:5:14.19:0,14,79	./.	0/0:2,0:2:6.02:0,6,78	0/0:1,0:1:3.01:0,3,39	0/0:8,0:8:24.08:0,24,709	0/1:3,0:6:43.21:62,0,43	0/1:5,0:7:13.44:13,0,132	0/0:2,0:2:5.67:0,6,36
chr10	110646030	.	ATTTATTT	A	784.76	PASS	AB=0.868;AC=7;AF=0.135;AN=52;BaseQRankSum=7.660;DP=202;FS=10.726;HRun=0;HaplotypeScore=58.1959;InbreedingCoeff=-0.1790;MQ=47.78;MQ0=16;MQRankSum=-5.304;QD=10.75;ReadPosRankSum=3.025;VQSLOD=0.2802;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:10:3.99:0,4,106	0/0:5,0:5:15.05:0,15,369	./.	0/0:4,0:1:3.01:0,3,39	0/0:3,0:3:9.03:0,9,204	0/0:10,0:10:30.10:0,30,977	./.	0/0:37,0:28:52.91:0,53,292	0/1:5,0:5:9.72:157,0,10	0/0:3,0:3:9.03:0,9,204	0/0:6,0:6:18.06:0,18,407	0/0:7,0:7:21.07:0,21,471	0/0:4,0:4:12.04:0,12,243	0/0:2,0:2:6.02:0,6,165	0/0:6,0:6:18.05:0,18,654	0/0:4,0:4:12.04:0,12,365	0/1:16,0:16:99:128,0,109	0/1:20,0:20:99:146,0,163	0/1:7,4:11:51.29:201,0,51	0/1:6,1:7:44.64:47,0,45	0/0:5,0:5:11.16:0,11,54	0/0:1,0:1:3.01:0,3,39	0/0:3,0:3:9.03:0,9,117	0/0:1,0:1:3.01:0,3,39	0/0:8,0:8:24.08:0,24,554	0/1:3,3:6:12.88:154,0,13	0/1:6,2:8:54.38:76,0,54	0/0:1,0:1:2.68:0,3,11
chr10	110648841	.	TG	T	1803.74	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.489;DP=604;FS=4.434;HRun=2;HaplotypeScore=78.1919;InbreedingCoeff=0.9625;MQ=68.56;MQ0=3;MQRankSum=-2.491;QD=14.91;ReadPosRankSum=1.295;VQSLOD=3.4804;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:64.90:0,65,871	0/0:8,0:8:24.03:0,24,264	0/0:17,0:10:26.47:0,26,276	0/0:16,0:13:38.92:0,39,427	0/0:31,0:31:93.30:0,93,1357	0/0:28,0:27:81.19:0,81,1119	0/0:18,0:18:54.17:0,54,768	0/0:33,0:33:96.49:0,96,1245	0/0:17,0:17:39.57:0,40,525	0/0:22,0:22:63.18:0,63,872	0/0:19,0:19:49.96:0,50,680	1/1:11,6:17:31.84:290,32,0	1/1:14,2:16:3.02:174,3,0	1/1:11,12:23:56.20:432,56,0	1/1:6,4:10:16.17:168,16,0	0/0:21,0:21:60.18:0,60,858	0/0:21,0:21:63.12:0,63,824	0/0:22,0:22:60.12:0,60,864	0/0:18,0:18:54.16:0,54,750	0/0:35,0:35:98.13:0,98,1418	0/0:26,0:26:78.20:0,78,1072	1/1:14,8:22:28.01:366,28,0	1/1:12,7:19:33.47:351,33,0	1/1:9,5:14:16.67:214,17,0	0/0:15,0:15:42.13:0,42,609	0/0:34,0:34:95.69:0,96,1313	0/0:33,0:32:92.69:0,93,1314	0/0:21,0:21:57.59:0,58,833
chr10	110648851	.	TTTG	T	2372.66	PASS	AB=0.909;AC=13;AF=0.232;AN=56;BaseQRankSum=12.189;DP=638;FS=0.858;HRun=0;HaplotypeScore=103.1461;InbreedingCoeff=0.8562;MQ=61.96;MQ0=12;MQRankSum=-0.985;QD=18.25;ReadPosRankSum=-0.615;VQSLOD=3.4522;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:75.09:0,75,1224	0/0:7,0:7:18.02:0,18,294	0/0:19,0:7:16.78:0,17,152	0/0:24,0:12:20.13:0,20,225	0/0:33,0:33:99:0,99,1869	0/0:30,0:29:81.22:0,81,1533	0/0:17,0:17:26.29:0,26,795	0/0:32,0:32:89.05:0,89,1418	0/0:15,0:15:42.07:0,42,704	0/0:26,0:24:69.16:0,69,1245	0/0:20,0:20:50.18:0,50,937	1/1:12,6:18:33.40:422,33,0	0/1:18,2:20:4.83:357,0,5	1/1:11,10:21:49.51:498,50,0	1/1:7,4:11:7.27:184,7,0	0/0:25,0:25:72.17:0,72,1298	0/0:24,0:24:66.03:0,66,1065	0/0:21,0:21:60.19:0,60,1184	0/0:19,0:18:54.11:0,54,954	0/0:39,0:39:99:0,117,1960	0/0:27,0:27:69.03:0,69,1225	1/1:17,8:25:6.70:430,7,0	1/1:12,7:19:13.37:422,13,0	1/1:11,5:15:5.20:235,5,0	0/0:17,0:17:45.13:0,45,875	0/0:31,0:31:87.24:0,87,1640	0/0:33,0:33:95.52:0,96,1831	0/0:21,0:21:60.17:0,60,1150
chr10	110648853	.	TG	T	1272.99	PASS	AB=0.898;AC=11;AF=0.196;AN=56;BaseQRankSum=12.637;DP=630;FS=1.891;HRun=1;HaplotypeScore=80.2725;InbreedingCoeff=0.2659;MQ=61.06;MQ0=13;MQRankSum=-0.395;QD=7.36;ReadPosRankSum=-0.173;VQSLOD=0.6626;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:72.51:0,73,819	0/0:6,0:6:17.99:0,18,197	0/1:21,0:7:11.22:11,0,81	0/1:24,0:12:2.92:3,0,149	0/0:34,0:34:99:0,102,1233	0/0:29,0:28:84.14:0,84,1011	0/0:17,0:17:26.31:0,26,577	0/0:32,0:32:86.39:0,86,1012	0/0:15,0:15:38.51:0,39,458	0/0:24,0:23:69.15:0,69,823	0/0:18,0:18:46.91:0,47,588	1/1:17,0:17:10.37:220,10,0	0/1:20,0:20:60.19:247,0,60	1/1:22,0:22:40.44:306,40,0	0/1:6,4:10:8.35:85,0,8	0/0:25,0:25:75.15:0,75,875	0/0:23,0:23:66:0,66,726	0/0:22,0:22:60.18:0,60,762	0/0:19,0:18:53.77:0,54,614	0/0:39,0:39:99:0,113,1314	0/0:26,0:26:72.01:0,72,848	0/1:17,7:24:57.18:219,0,57	0/1:19,0:19:19.80:230,0,20	0/1:12,4:15:7.51:106,0,8	0/0:16,0:16:45.12:0,45,553	0/0:29,0:29:84.07:0,84,1038	0/0:31,1:32:59.97:0,60,1080	0/0:20,0:20:56:0,56,714
chr10	110649946	.	C	CTTTT	2995.90	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-1.594;DP=560;FS=1.060;HRun=9;HaplotypeScore=113.7590;InbreedingCoeff=0.9746;MQ=88.42;MQ0=0;MQRankSum=-2.961;QD=28.26;ReadPosRankSum=-5.735;VQSLOD=0.5086;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:49.71:0,50,683	0/0:9,0:9:24.05:0,24,351	0/0:19,0:20:17.55:0,18,417	0/0:22,0:24:32.89:0,33,542	1/1:7,16:27:61.75:1056,62,0	1/1:8,19:32:34.93:713,35,0	1/1:8,8:18:27.01:549,27,0	0/0:23,0:23:26.90:0,27,536	0/0:19,0:19:54.17:0,54,790	0/0:24,0:24:63.15:0,63,921	0/0:18,0:19:45.07:0,45,633	0/0:18,0:18:38.44:0,38,684	0/0:21,0:21:42.03:0,42,614	0/0:26,0:26:71.21:0,71,991	0/0:36,0:36:87.80:0,88,1283	0/0:28,0:28:72.17:0,72,1008	0/0:20,0:20:60.20:0,60,878	0/0:20,0:20:51.09:0,51,720	0/0:8,0:8:17.84:0,18,226	0/0:12,0:12:21.03:0,21,307	0/0:7,0:7:12.01:0,12,171	0/0:22,0:22:63.14:0,63,871	0/0:18,0:18:48.12:0,48,677	0/0:19,0:19:51.16:0,51,736	1/1:10,18:29:41.62:838,42,0	0/0:12,0:12:14.20:0,14,344	0/0:19,0:19:39.47:0,39,548	0/0:10,0:10:14.95:0,15,195
chr10	110652060	.	G	GA	2003.28	PASS	AB=0.764;AC=20;AF=0.357;AN=56;BaseQRankSum=-4.773;DP=674;FS=1.455;HRun=15;HaplotypeScore=91.1830;InbreedingCoeff=0.2567;MQ=73.85;MQ0=0;MQRankSum=-1.190;QD=4.97;ReadPosRankSum=-3.355;VQSLOD=1.5162;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:41,2:47:55.58:56,0,142	0/1:11,1:14:5.60:6,0,76	0/1:22,0:19:0.62:1,0,23	0/0:11,0:7:6.92:0,7,26	1/1:10,14:26:4.81:237,5,0	1/1:17,10:28:34.04:347,34,0	1/1:10,13:25:26.72:207,27,0	0/0:10,0:20:16.66:0,17,47	0/0:20,3:25:13.95:0,14,184	0/0:25,1:28:0.67:0,1,108	0/0:14,0:14:20.20:0,20,125	0/1:8,11:20:18.05:81,0,18	0/1:8,17:26:2.36:177,0,2	1/1:12,13:26:19.77:127,20,0	0/1:9,31:42:14.39:328,0,14	0/0:23,0:28:38.03:0,38,215	0/0:29,0:31:59.63:0,60,351	0/0:12,0:15:18.42:0,18,101	0/0:14,0:21:14.15:0,14,49	0/0:10,0:19:9.95:0,10,29	0/0:8,0:27:26.32:0,26,76	0/1:18,6:27:9.17:149,0,9	0/1:10,11:23:22.47:55,0,22	1/1:6,18:26:17.02:267,17,0	0/1:3,15:19:8.74:139,0,9	0/1:17,1:31:3.44:3,0,42	0/0:8,0:22:27.90:0,28,100	0/0:5,0:9:7.32:0,7,22
chr10	110655041	.	CT	C	2671.29	PASS	AB=0.968;AC=15;AF=0.268;AN=56;BaseQRankSum=10.639;DP=726;FS=1.138;HRun=11;HaplotypeScore=91.1467;InbreedingCoeff=0.8698;MQ=72.57;MQ0=6;MQRankSum=2.185;QD=11.42;ReadPosRankSum=-0.139;VQSLOD=3.3456;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:39:52.77:0,53,895	0/0:11,0:11:27.05:0,27,280	0/1:59,2:27:22.90:23,0,247	0/0:43,1:21:10.98:0,11,209	0/0:21,1:22:38.50:0,39,607	0/0:17,1:18:17.46:0,17,391	0/0:18,0:18:45.05:0,45,453	1/1:10,16:27:49.91:390,50,0	0/0:21,2:23:35.48:0,35,568	0/0:27,0:27:69.10:0,69,698	0/0:17,0:17:39.10:0,39,414	0/0:23,0:23:54.11:0,54,566	0/0:16,0:16:35.91:0,36,358	0/0:21,2:23:8.45:0,8,466	0/0:29,0:32:77.91:0,78,784	0/0:30,1:31:65.61:0,66,888	0/0:34,0:34:95.90:0,96,967	0/0:20,0:23:53.48:0,53,484	1/1:4,21:26:64.84:506,65,0	1/1:0,25:25:68.47:544,68,0	1/1:3,16:19:38.92:320,39,0	0/0:18,1:19:20.46:0,20,417	0/0:23,1:25:41.33:0,41,613	0/0:23,0:23:50.79:0,51,517	0/0:23,1:24:5.31:0,5,456	1/1:2,21:25:67.83:525,68,0	1/1:6,26:34:41.36:384,41,0	1/1:9,7:17:22.97:178,23,0
chr10	110656683	.	CT	C	4117.69	PASS	AB=0.829;AC=36;AF=0.643;AN=56;BaseQRankSum=10.191;DP=687;FS=9.015;HRun=13;HaplotypeScore=85.0957;InbreedingCoeff=0.8185;MQ=73.27;MQ0=2;MQRankSum=-1.845;QD=8.53;ReadPosRankSum=5.133;VQSLOD=2.3098;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:27:38.45:0,38,476	0/0:9,0:9:24.04:0,24,234	0/1:22,0:16:0.19:0,0,71	0/0:15,0:10:2.75:0,3,26	1/1:8,20:29:55.56:397,56,0	1/1:7,20:27:2.62:318,3,0	1/1:3,11:14:27.32:198,27,0	1/1:8,14:22:14.12:259,14,0	0/0:22,0:22:54.05:0,54,506	0/0:29,0:29:63.06:0,63,587	0/0:16,1:17:17.06:0,17,308	1/1:5,0:30:46.82:136,47,0	1/1:7,0:27:37.47:108,37,0	1/1:2,0:24:38.70:111,39,0	1/1:7,1:30:37.57:122,38,0	0/0:29,0:29:75.03:0,75,693	0/0:32,2:34:49.27:0,49,766	0/0:22,0:22:50.85:0,51,469	0/1:12,13:25:40.47:222,0,40	1/1:9,16:26:28.81:296,29,0	1/1:7,10:17:11.88:179,12,0	1/1:8,0:31:36.14:104,36,0	1/1:7,0:30:36.63:105,37,0	1/1:2,2:23:34.47:126,34,0	1/1:12,22:34:18.91:353,19,0	1/1:4,17:21:50.69:372,51,0	1/1:9,20:30:35.46:412,35,0	1/1:3,15:18:18.50:299,19,0
chr10	110656695	.	TTG	T	590.33	PASS	AB=0.983;AC=8;AF=0.143;AN=56;BaseQRankSum=11.892;DP=680;FS=0.000;HRun=0;HaplotypeScore=110.1442;InbreedingCoeff=0.1249;MQ=71.68;MQ0=2;MQRankSum=-2.943;QD=3.06;ReadPosRankSum=5.371;VQSLOD=1.8605;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.08:0,72,1038	0/0:9,0:9:27.08:0,27,445	0/0:23,0:17:39.71:0,40,377	0/0:20,0:17:19.89:0,20,219	0/0:27,0:27:46.69:0,47,386	0/0:26,0:26:67.79:0,68,474	0/0:13,0:13:22.76:0,23,177	0/0:22,0:22:48.99:0,49,392	0/0:21,0:21:60.12:0,60,880	0/0:35,0:35:99:0,99,1245	0/0:16,0:16:41.78:0,42,547	0/1:34,0:34:99:107,0,116	1/1:21,3:24:37.16:184,37,0	0/1:25,1:26:35.53:129,0,36	0/1:28,0:27:39.34:39,0,73	0/0:27,0:27:81.19:0,81,1188	0/0:37,0:37:99:0,105,1480	0/0:22,0:22:63.09:0,63,913	0/0:21,0:21:33.24:0,33,404	0/0:24,1:25:51.18:0,51,398	0/0:16,0:16:41.40:0,41,277	0/1:27,2:27:24.46:136,0,24	0/1:27,0:27:35.76:89,0,36	0/1:25,0:25:48.19:48,0,85	0/0:26,0:26:61.38:0,61,412	0/0:24,0:24:71.04:0,71,500	0/0:28,0:28:51.83:0,52,415	0/0:22,0:22:62.09:0,62,451
chr10	110656973	.	C	CA	6325.05	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=17.924;DP=743;FS=3.720;HRun=1;HaplotypeScore=84.5560;InbreedingCoeff=0.9997;MQ=83.65;MQ0=1;MQRankSum=-6.305;QD=34.01;ReadPosRankSum=-1.311;VQSLOD=4.2403;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,1701	0/0:10,0:10:30.10:0,30,389	0/0:29,0:28:84.23:0,84,1033	0/0:31,0:31:70.45:0,70,971	0/0:26,0:26:75.23:0,75,957	0/0:21,0:21:60.19:0,60,765	0/0:30,0:30:84.27:0,84,1089	1/1:5,28:33:81.93:1061,82,0	0/0:10,0:10:27.09:0,27,350	0/0:40,0:40:99:0,114,1437	0/0:18,0:18:51.16:0,51,649	0/0:32,0:32:93.27:0,93,1164	0/0:18,0:18:54.18:0,54,699	0/0:17,0:17:48.14:0,48,605	0/0:35,0:35:99:0,102,1311	0/0:34,0:34:99:0,102,1323	0/0:24,0:24:72.18:0,72,889	0/0:19,0:19:57.19:0,57,739	1/1:0,20:20:60.15:748,60,0	1/1:1,25:26:66.22:870,66,0	1/1:7,24:31:81.72:1047,82,0	0/0:33,0:33:99:0,99,1244	0/0:33,0:33:96.30:0,96,1229	0/0:34,0:34:99:0,102,1306	0/0:17,0:17:51.14:0,51,634	1/1:2,33:35:96.32:1268,96,0	1/1:3,24:27:69.16:870,69,0	1/1:3,11:14:36.10:461,36,0
chr10	110660888	.	TG	T	2296.58	PASS	AB=0.917;AC=29;AF=0.518;AN=56;BaseQRankSum=8.044;DP=438;FS=1.418;HRun=11;HaplotypeScore=50.9324;InbreedingCoeff=0.3753;MQ=79.95;MQ0=0;MQRankSum=-2.382;QD=7.84;ReadPosRankSum=3.009;VQSLOD=1.7466;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:7.93:0,8,400	0/0:6,0:6:9.96:0,10,94	0/0:9,0:9:12.02:0,12,118	0/1:15,1:15:4.61:5,0,25	0/1:15,2:17:12.64:13,0,253	0/0:15,0:15:29.18:0,29,274	0/0:17,1:18:42.07:0,42,430	0/1:15,1:16:12.93:62,0,13	0/0:16,1:18:7.45:0,7,286	0/1:11,3:14:46.87:47,0,152	0/0:11,1:12:0.28:0,0,185	1/1:7,17:24:35.91:296,36,0	1/1:4,12:17:29.18:228,29,0	1/1:4,13:17:34.99:277,35,0	1/1:0,13:13:32.96:271,33,0	0/0:16,0:16:42.08:0,42,432	0/1:16,3:19:1.19:1,0,383	0/0:24,1:25:41.10:0,41,578	0/1:20,1:22:68.19:68,0,71	0/1:13,0:13:9.78:50,0,10	1/1:15,0:15:13.58:66,14,0	1/1:1,11:12:29.97:246,30,0	1/1:4,12:16:32.96:271,33,0	1/1:2,16:18:47.94:394,48,0	0/1:8,2:10:0.58:1,0,191	0/1:13,0:13:18.83:54,0,19	1/1:12,0:12:21.30:100,21,0	1/1:9,0:9:8.42:40,8,0
chr10	110660898	.	GGC	G	579.29	PASS	AB=0.927;AC=11;AF=0.196;AN=56;BaseQRankSum=4.886;DP=418;FS=1.105;HRun=0;HaplotypeScore=62.5892;InbreedingCoeff=0.5725;MQ=79.18;MQ0=0;MQRankSum=0.404;QD=6.44;ReadPosRankSum=-1.149;VQSLOD=2.8932;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:28.07:0,28,915	0/0:7,0:7:18.49:0,18,234	0/0:7,0:7:20.93:0,21,244	0/0:16,0:15:3.20:0,3,152	0/0:15,0:15:34.68:0,35,569	0/0:12,0:12:32.14:0,32,471	0/0:20,0:20:60.12:0,60,917	1/1:17,2:19:18.77:280,19,0	0/0:15,0:15:44.51:0,45,650	0/0:14,0:14:35.66:0,36,423	0/0:9,0:9:26.95:0,27,415	0/0:21,0:21:52.45:0,52,350	0/0:15,0:15:17.90:0,18,178	0/0:16,0:16:34.46:0,34,205	0/0:14,0:14:34.56:0,35,189	0/0:19,0:19:57.07:0,57,899	0/0:19,0:19:50.82:0,51,804	0/0:25,0:25:70.65:0,71,1169	0/1:16,3:19:71.42:218,0,71	0/1:8,0:8:16.80:37,0,17	1/1:11,0:11:9.22:40,9,0	0/0:13,0:13:34.70:0,35,196	0/0:13,0:13:23.32:0,23,134	0/0:19,0:19:55:0,55,316	0/0:16,0:16:41.55:0,42,514	0/1:10,1:11:27.81:62,0,28	1/1:13,0:13:15.90:90,16,0	1/1:9,0:9:4.36:11,4,0
chr10	110660899	.	GC	G	1533.47	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=4.900;DP=421;FS=5.534;HRun=4;HaplotypeScore=51.7263;InbreedingCoeff=0.7297;MQ=79.06;MQ0=0;MQRankSum=0.816;QD=11.62;ReadPosRankSum=1.729;VQSLOD=1.0184;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:55.67:0,56,648	0/0:7,0:7:15.44:0,15,144	0/0:6,0:6:17.91:0,18,179	0/0:17,0:16:23.02:0,23,191	0/0:14,0:15:33.47:0,33,418	0/0:12,0:12:26.90:0,27,299	0/0:22,0:22:63.01:0,63,664	1/1:5,14:19:44.93:387,45,0	0/0:15,0:15:38.41:0,38,406	0/0:14,0:14:26.05:0,26,271	0/0:9,0:9:21.07:0,21,271	0/0:21,0:21:16.70:0,17,144	0/0:16,0:16:7.58:0,8,84	0/1:16,0:16:11.33:11,0,59	0/0:14,0:14:2.95:0,3,34	0/0:19,0:19:56.86:0,57,620	0/0:18,0:18:45.33:0,45,532	0/0:25,0:25:64.56:0,65,809	1/1:14,5:19:37.75:322,38,0	1/1:3,5:8:14.35:132,14,0	1/1:0,11:11:18.04:200,18,0	0/1:13,0:13:3.48:3,0,42	0/1:14,0:14:7.45:46,0,7	0/0:20,0:20:18.38:0,18,122	0/0:16,0:16:35.66:0,36,337	1/1:5,6:11:22.97:206,23,0	1/1:5,7:12:29.98:314,30,0	1/1:0,9:9:9.03:107,9,0
chr10	110662730	.	AG	A	3766.06	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.273;DP=574;FS=0.428;HRun=1;HaplotypeScore=74.3283;InbreedingCoeff=0.9755;MQ=76.71;MQ0=6;MQRankSum=1.621;QD=34.87;ReadPosRankSum=-1.388;VQSLOD=3.0868;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1672	0/0:4,0:4:9.03:0,9,144	0/0:38,0:27:54.48:0,54,830	0/0:88,0:51:79.91:0,80,1259	0/0:7,0:7:18.06:0,18,288	0/0:18,0:18:54.08:0,54,809	0/0:21,0:21:60.17:0,60,908	1/1:1,18:18:48.23:686,48,0	0/0:21,0:21:63.21:0,63,963	0/0:12,0:12:36.11:0,36,543	0/0:4,0:4:11.78:0,12,156	0/0:18,0:18:54.17:0,54,830	0/0:18,0:18:54.18:0,54,862	0/0:26,0:26:75.25:0,75,1175	0/0:32,0:32:96.30:0,96,1476	0/0:20,0:20:54.18:0,54,847	0/0:19,0:18:54.18:0,54,863	0/0:17,0:17:44.96:0,45,707	1/1:0,18:18:54.18:748,54,0	1/1:0,9:9:21.06:278,21,0	1/1:2,27:29:65.33:921,65,0	0/0:13,0:13:39.12:0,39,589	0/0:14,0:14:36.12:0,36,562	0/0:26,0:25:72.18:0,72,1075	0/0:12,0:12:36.12:0,36,564	1/1:0,16:16:42.14:587,42,0	1/1:0,10:10:27.09:378,27,0	1/1:0,7:6:12.04:168,12,0
chr10	110662912	.	TGGACAC	T	136.09	PASS	AB=0.944;AC=6;AF=0.107;AN=56;BaseQRankSum=7.715;DP=401;FS=0.000;HRun=0;HaplotypeScore=96.0945;InbreedingCoeff=-0.1220;MQ=65.65;MQ0=8;MQRankSum=1.063;QD=1.53;ReadPosRankSum=5.580;VQSLOD=0.9147;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.20:0,75,1780	0/0:7,0:7:18.06:0,18,504	0/0:21,0:15:45.02:0,45,856	0/0:23,0:19:57.08:0,57,1161	0/0:7,0:7:18.06:0,18,329	0/0:22,0:22:57.19:0,57,1298	0/0:18,0:18:51.17:0,51,1396	0/0:20,0:19:57.19:0,57,1223	0/0:15,0:15:42.14:0,42,1053	0/0:17,0:16:48.16:0,48,1510	0/0:9,0:9:24.08:0,24,672	0/1:16,0:16:3.84:4,0,366	0/1:6,6:12:46.88:47,0,217	0/1:16,0:16:16.13:16,0,86	0/1:13,0:11:30.76:50,0,31	0/0:15,0:15:45.15:0,45,1090	0/0:14,0:13:39:0,39,1034	0/0:11,0:11:32.89:0,33,771	0/0:17,0:16:45.10:0,45,928	0/0:6,0:5:12.04:0,12,243	0/0:14,0:14:23.98:0,24,413	0/1:11,0:10:54.55:55,0,171	0/0:11,0:10:5.91:0,6,103	0/1:21,0:21:83.37:83,0,229	0/0:5,0:3:9.03:0,9,190	0/0:11,0:11:30.10:0,30,838	0/0:11,0:10:26.30:0,26,612	0/0:12,0:12:33.08:0,33,685
chr10	110662914	.	GACACAC	G	1858.11	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=0.811;DP=427;FS=3.517;HRun=0;HaplotypeScore=96.0321;InbreedingCoeff=0.7062;MQ=61.12;MQ0=10;MQRankSum=3.065;QD=19.16;ReadPosRankSum=2.919;VQSLOD=3.1767;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:45.08:0,45,941	0/0:6,0:6:12.04:0,12,294	0/0:20,0:14:6.02:0,6,152	0/0:21,0:17:14.43:0,14,325	0/0:7,0:7:3.01:0,3,74	0/0:22,0:22:36:0,36,624	0/0:19,0:18:33.11:0,33,748	0/0:28,0:26:39.12:0,39,776	0/0:16,0:17:30:0,30,536	0/0:18,0:17:45.15:0,45,1088	0/0:10,0:10:21.05:0,21,473	1/1:14,0:15:12.04:226,12,0	1/1:11,0:11:9.03:166,9,0	1/1:4,11:16:2.51:50,3,0	1/1:10,1:11:24.08:483,24,0	0/0:12,0:12:27.08:0,27,538	0/0:14,0:13:12.10:0,12,660	0/1:11,0:11:18.66:19,0,373	0/0:20,0:18:23.97:0,24,459	0/0:12,0:11:5.61:0,6,127	0/0:17,0:17:3.01:0,3,39	1/1:9,0:9:21.05:342,21,0	./.	1/1:20,0:21:35.59:744,36,0	0/0:5,0:3:6:0,6,98	0/0:17,0:15:39:0,39,627	0/0:12,0:11:23.16:0,23,370	0/0:14,0:12:12.04:0,12,272
chr10	110662944	.	CAGAGAGAG	C	1088.31	PASS	AB=0.923;AC=21;AF=0.420;AN=50;BaseQRankSum=2.034;DP=398;FS=9.751;HRun=0;HaplotypeScore=100.4867;InbreedingCoeff=0.5315;MQ=47.35;MQ0=19;MQRankSum=0.486;QD=6.36;ReadPosRankSum=-1.575;VQSLOD=0.3345;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:30.09:0,30,817	0/0:7,0:7:3.01:0,3,97	./.	./.	0/0:7,0:7:5.92:0,6,98	0/0:17,0:17:9.50:0,10,202	0/0:19,0:18:3.01:0,3,74	./.	0/0:15,0:15:9.50:0,10,184	0/0:19,0:16:6.01:0,6,72	0/0:12,0:12:9.01:0,9,173	1/1:7,10:17:0.87:12,1,0	1/1:14,0:12:12.04:172,12,0	1/1:20,0:21:10.34:223,10,0	1/1:14,0:13:4.98:68,5,0	0/0:20,0:20:21.98:0,22,515	0/0:21,0:19:27.09:0,27,709	0/0:8,0:8:3.48:0,3,56	0/1:11,0:9:30.37:48,0,30	0/0:9,0:9:0.47:0,0,1	1/1:15,0:14:2.22:7,2,0	1/1:10,0:9:6.99:158,7,0	1/1:18,0:17:18.06:338,18,0	1/1:17,0:24:5.95:54,6,0	0/0:7,0:5:3.01:0,3,96	1/1:13,0:13:6.02:114,6,0	1/1:8,0:8:3.01:56,3,0	0/0:7,0:6:2.92:0,3,17
chr10	110663190	.	AG	A	195.96	PASS	AB=0.852;AC=13;AF=0.232;AN=56;BaseQRankSum=3.651;DP=225;FS=5.860;HRun=1;HaplotypeScore=32.9796;InbreedingCoeff=0.6572;MQ=82.18;MQ0=0;MQRankSum=-0.205;QD=4.17;ReadPosRankSum=-1.128;VQSLOD=-0.0624;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:42.02:0,42,541	0/0:2,0:2:6:0,6,71	0/0:12,0:10:14.74:0,15,156	0/1:16,0:13:11.29:11,0,113	0/0:2,0:2:6:0,6,68	0/0:10,0:10:23.43:0,23,278	0/0:10,0:10:27.27:0,27,342	0/0:14,0:14:35.66:0,36,328	0/0:9,0:9:26.85:0,27,287	0/0:3,0:3:6.02:0,6,89	0/0:8,0:8:17.95:0,18,253	0/1:3,0:3:1.93:12,0,2	1/1:3,0:3:1.13:13,1,0	1/1:3,0:3:5.62:25,6,0	1/1:5,0:5:11.88:87,12,0	0/0:7,0:7:15:0,15,208	0/0:15,0:15:21.22:0,21,440	0/0:19,0:19:47.20:0,47,663	0/0:6,0:6:18:0,18,233	0/0:7,0:7:20.91:0,21,252	0/0:13,0:13:27.52:0,28,364	0/1:0,4:5:0:0,0,0	1/1:4,0:4:11.21:81,11,0	1/1:8,0:8:14.95:123,15,0	0/0:8,0:8:21.04:0,21,282	0/0:7,0:7:18.03:0,18,195	0/0:6,0:6:18.01:0,18,246	0/0:6,0:6:13.88:0,14,207
chr10	110664547	.	G	GTA	5050.87	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.103;DP=831;FS=5.808;HRun=0;HaplotypeScore=144.5619;InbreedingCoeff=0.9071;MQ=52.27;MQ0=27;MQRankSum=0.876;QD=24.05;ReadPosRankSum=1.140;VQSLOD=5.6077;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:83.62:0,84,1212	0/0:12,0:11:33.02:0,33,406	0/0:31,0:9:14.15:0,14,168	0/0:36,0:5:11.98:0,12,110	0/0:38,0:38:90.14:0,90,1144	0/0:36,0:35:90.03:0,90,1036	0/0:37,0:36:72.54:0,73,1042	1/1:6,27:29:74.35:665,74,0	0/0:29,0:29:80.38:0,80,963	0/0:34,0:33:92.70:0,93,1111	0/0:29,0:28:60.03:0,60,680	0/0:13,0:12:11.08:0,11,77	0/0:16,0:16:1.71:0,2,53	0/0:28,0:27:23.10:0,23,198	0/0:29,0:28:30.89:0,31,247	0/0:27,0:27:78.09:0,78,931	0/0:37,0:37:99:0,102,1169	0/0:26,0:26:63:0,63,732	1/1:7,14:20:27.31:535,27,0	1/1:18,15:33:77.06:1237,77,0	1/1:5,43:48:19.37:833,19,0	0/0:34,0:33:11.35:0,11,174	0/0:20,0:19:18.20:0,18,144	0/0:42,0:41:30.12:0,30,235	0/0:21,0:20:54.06:0,54,632	1/1:5,29:35:67.16:1081,67,0	1/1:4,29:33:13.60:588,14,0	1/1:1,4:5:4.24:112,4,0
chr10	110664649	.	G	GAGAC	10696.60	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-12.689;DP=805;FS=2.021;HRun=0;HaplotypeScore=107.1110;InbreedingCoeff=0.9324;MQ=53.96;MQ0=28;MQRankSum=-1.220;QD=27.93;ReadPosRankSum=1.207;VQSLOD=4.8690;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:44:93.28:0,93,1580	0/0:9,0:9:24.05:0,24,386	0/0:22,0:1:2.98:0,3,22	0/0:36,0:2:2.37:0,2,8	0/0:26,0:26:72.21:0,72,1183	0/0:25,0:24:66.21:0,66,1120	0/0:40,0:40:90.25:0,90,1490	1/1:7,31:36:89.92:1351,90,0	0/0:26,0:26:66.21:0,66,1126	0/0:39,0:39:99:0,108,1787	0/0:24,0:24:63:0,63,1046	1/1:2,13:16:21.07:539,21,0	1/1:6,20:27:30.03:699,30,0	1/1:3,24:27:24.08:623,24,0	1/1:4,22:26:33.11:857,33,0	0/0:22,0:22:63.17:0,63,1039	0/0:50,0:50:99:0,121,2005	0/0:42,0:42:99:0,114,1816	1/1:7,9:15:30.05:583,30,0	1/1:4,35:39:36.12:851,36,0	1/1:22,11:31:44.59:910,45,0	1/1:2,18:20:6.02:156,6,0	1/1:3,17:23:13.29:309,13,0	1/1:8,35:44:36.12:934,36,0	0/0:15,0:15:45.15:0,45,786	1/1:9,23:32:42.84:1447,43,0	1/1:4,22:25:39.13:1011,39,0	1/1:1,10:12:18.06:426,18,0
chr10	110666146	.	A	ATTT	6538.68	PASS	AB=0.573;AC=26;AF=0.464;AN=56;BaseQRankSum=3.746;DP=651;FS=7.787;HRun=9;HaplotypeScore=103.1014;InbreedingCoeff=0.8631;MQ=74.52;MQ0=0;MQRankSum=-3.061;QD=20.50;ReadPosRankSum=-2.217;VQSLOD=2.3113;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:29:49.86:0,50,849	0/0:15,0:15:39.11:0,39,493	0/0:11,0:11:27.05:0,27,327	0/0:16,0:16:24:0,24,328	0/0:31,0:33:84.16:0,84,1027	0/0:23,0:23:57.16:0,57,720	0/0:18,0:19:45.01:0,45,548	1/1:10,23:37:84.20:1405,84,0	0/0:32,0:33:99:0,99,1217	0/0:38,0:39:99:0,102,1259	0/0:23,0:23:63.19:0,63,796	0/1:8,0:27:13.24:35,0,13	1/1:4,0:24:21.18:46,21,0	1/1:2,0:18:14.95:32,15,0	1/1:2,0:30:27.91:76,28,0	0/0:26,0:28:76.75:0,77,962	0/0:27,0:29:75.39:0,75,978	0/0:9,0:10:23.98:0,24,268	1/1:9,12:21:34.29:716,34,0	1/1:5,26:33:87.20:1435,87,0	1/1:2,16:22:30.95:521,31,0	1/1:4,0:16:13.71:29,14,0	0/1:4,0:19:4.63:17,0,5	1/1:4,0:13:11.21:24,11,0	0/0:23,0:24:66.11:0,66,814	1/1:5,17:28:66.16:1094,66,0	1/1:3,20:26:48.12:871,48,0	1/1:0,5:5:12.04:237,12,0
chr10	110667202	.	AAAAAAAAAAAAAAAAAAAAGAAC	A	369.76	PASS	AB=0.797;AC=2;AF=0.036;AN=56;BaseQRankSum=2.922;DP=495;FS=0.000;HRun=0;HaplotypeScore=225.7379;InbreedingCoeff=-0.0606;MQ=36.77;MQ0=53;MQRankSum=-2.029;QD=9.73;ReadPosRankSum=1.093;VQSLOD=2.4666;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:66.18:0,66,4311	0/0:10,0:10:24.97:0,25,1805	0/0:30,0:2:6.02:0,6,204	0/0:25,0:3:9.03:0,9,388	0/0:24,0:22:56.53:0,57,3111	0/0:19,0:17:51.17:0,51,3533	0/0:16,0:14:35.99:0,36,1811	0/0:18,0:16:39.99:0,40,2175	0/0:10,0:9:21.06:0,21,1069	0/0:16,0:14:42.07:0,42,1631	0/0:14,0:14:39.05:0,39,1889	0/0:15,0:12:21.54:0,22,237	0/1:11,12:22:99:141,0,180	0/0:14,0:12:28.62:0,29,273	0/0:7,0:7:11.25:0,11,110	0/0:10,0:9:27:0,27,1559	0/0:31,0:27:78.71:0,79,4614	0/0:19,0:15:42.13:0,42,3042	0/0:13,0:11:24.06:0,24,1626	0/0:17,0:11:30.09:0,30,1834	0/0:3,0:2:3.01:0,3,65	0/0:9,0:9:21.45:0,21,222	0/1:14,1:13:99:317,0,142	0/0:14,0:12:0.84:0,1,96	0/0:27,0:27:81.27:0,81,5264	0/0:22,0:20:54.14:0,54,3151	0/0:21,0:16:39.98:0,40,2799	0/0:26,0:22:47.96:0,48,999
chr10	110668093	.	GA	G	5034.44	PASS	AB=0.867;AC=29;AF=0.518;AN=56;BaseQRankSum=1.699;DP=599;FS=15.209;HRun=11;HaplotypeScore=68.8346;InbreedingCoeff=0.9413;MQ=64.56;MQ0=5;MQRankSum=0.013;QD=17.36;ReadPosRankSum=0.377;VQSLOD=4.3303;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:38:87.05:0,87,909	0/0:8,0:8:21.02:0,21,213	0/1:11,2:12:1.96:2,0,123	0/0:13,0:9:11.34:0,11,112	0/0:11,0:36:67.45:0,67,397	0/0:4,0:21:42.78:0,43,231	0/0:6,0:15:25.67:0,26,129	1/1:9,27:31:47:584,47,0	0/0:17,1:18:23.47:0,23,449	0/0:30,1:30:38.51:0,39,614	0/0:13,0:14:32.92:0,33,334	1/1:3,16:19:50.91:414,51,0	1/1:2,14:16:35.95:295,36,0	1/1:1,12:13:32.95:268,33,0	1/1:4,16:20:44.94:369,45,0	0/0:18,0:18:51.10:0,51,523	0/0:32,4:37:40.61:0,41,800	0/0:27,0:28:65.95:0,66,665	1/1:2,19:21:52.96:423,53,0	1/1:2,22:25:64.94:522,65,0	1/1:2,5:8:11.98:99,12,0	1/1:5,14:18:31.75:309,32,0	1/1:1,12:13:26.97:222,27,0	1/1:5,15:19:29.96:246,30,0	0/0:5,0:30:71.51:0,72,397	1/1:1,22:23:65.92:541,66,0	1/1:5,28:33:12.08:544,12,0	1/1:3,8:11:23.96:195,24,0
chr10	110668362	.	CT	C	4363.76	PASS	AB=0.545;AC=13;AF=0.232;AN=56;BaseQRankSum=9.699;DP=671;FS=6.687;HRun=7;HaplotypeScore=75.1589;InbreedingCoeff=0.8971;MQ=74.66;MQ0=3;MQRankSum=-1.208;QD=22.85;ReadPosRankSum=0.461;VQSLOD=4.7075;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1418	0/0:6,0:6:18.05:0,18,215	0/0:38,0:30:40.52:0,41,614	0/0:36,0:29:27.94:0,28,449	0/0:19,1:20:21.40:0,21,529	0/0:22,0:22:57.17:0,57,705	0/0:29,0:29:78.24:0,78,965	1/1:8,25:33:73.15:699,73,0	0/0:18,0:18:48.13:0,48,579	0/0:29,0:29:81.22:0,81,988	0/0:14,0:14:42.13:0,42,528	0/0:31,0:31:84.26:0,84,1047	0/0:24,0:24:57.14:0,57,697	0/0:26,0:26:66.18:0,66,792	0/0:19,0:19:51.15:0,51,628	0/0:20,0:20:60.19:0,60,753	0/0:18,0:18:54.15:0,54,655	0/0:11,0:11:27.04:0,27,318	1/1:3,16:19:47.90:475,48,0	1/1:1,16:17:45.10:459,45,0	1/1:3,38:41:99:1001,99,0	0/0:12,0:12:33.06:0,33,395	0/0:20,0:20:48.14:0,48,584	0/0:23,0:23:69.20:0,69,852	0/0:22,0:22:51.16:0,51,640	0/1:4,20:24:45.49:507,0,45	1/1:2,37:38:93.20:948,93,0	1/1:1,17:18:27.06:275,27,0
chr10	110668612	.	CTTCTTCTTCTTT	C	1499.99	PASS	AB=1.000;AC=28;AF=0.519;AN=54;BaseQRankSum=8.577;DP=572;FS=5.961;HRun=0;HaplotypeScore=173.1300;InbreedingCoeff=-0.3795;MQ=38.29;MQ0=97;MQRankSum=-1.716;QD=2.96;ReadPosRankSum=-6.022;VQSLOD=0.3230;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:21:49.85:50,0,227	0/0:14,0:13:32.95:0,33,406	0/0:2,0:1:2.80:0,3,13	./.	1/1:11,19:22:15.05:131,15,0	0/1:23,0:14:24.52:123,0,25	0/1:24,0:11:9.58:27,0,10	0/1:32,0:22:34.76:35,0,108	0/1:27,0:25:8.98:9,0,442	0/0:30,0:25:62.68:0,63,763	0/0:20,0:16:37.87:0,38,780	0/1:22,0:18:18.94:138,0,19	0/1:20,0:13:39.86:40,0,116	1/1:18,0:16:5.85:72,6,0	0/1:26,0:19:52.73:53,0,122	0/1:17,0:16:45.72:46,0,134	0/1:27,0:25:35.35:35,0,213	0/1:17,0:13:12.24:12,0,113	0/1:20,0:17:74.93:160,0,75	0/1:31,0:24:33.91:48,0,34	1/1:8,0:2:3.06:8,3,0	0/1:18,0:13:43.31:43,0,153	0/1:13,0:10:37.48:37,0,117	0/1:13,0:12:22.77:23,0,46	1/1:23,0:12:14.63:97,15,0	0/1:25,0:21:99:172,0,241	0/1:34,0:23:99:155,0,267	1/1:15,0:11:23.42:148,23,0
chr10	110668672	.	CTTA	C	1884.41	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=1.330;DP=455;FS=10.906;HRun=0;HaplotypeScore=95.6082;InbreedingCoeff=0.6458;MQ=49.10;MQ0=48;MQRankSum=-1.912;QD=8.45;ReadPosRankSum=0.151;VQSLOD=2.2096;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:51.09:0,51,355	0/1:5,0:5:12.09:12,0,54	0/0:5,0:1:3:0,3,26	0/0:4,0:2:6:0,6,54	0/0:28,0:27:56.75:0,57,445	0/0:14,0:14:41.85:0,42,335	0/0:12,0:10:20.87:0,21,162	1/1:25,15:33:41.78:349,42,0	0/1:23,0:21:40.47:40,0,200	0/0:19,0:19:51.05:0,51,693	0/0:17,0:17:42.02:0,42,507	0/0:14,0:12:23.80:0,24,179	0/0:16,0:10:19.22:0,19,151	0/0:8,0:6:14.80:0,15,103	0/0:13,0:7:14.91:0,15,117	0/0:21,0:20:26.98:0,27,332	0/1:26,0:23:26.89:27,0,167	0/1:14,0:12:1.78:2,0,123	1/1:11,0:9:20.91:180,21,0	1/1:21,0:18:32.73:242,33,0	1/1:8,0:5:11.99:100,12,0	0/0:9,0:6:3:0,3,25	0/0:13,0:11:23.84:0,24,183	1/1:14,0:13:17.67:111,18,0	0/0:16,0:16:35.94:0,36,297	1/1:19,0:18:39.42:335,39,0	1/1:35,0:29:62.61:523,63,0	1/1:7,0:7:20.93:164,21,0
chr10	110669315	.	TACAC	T	622.24	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=-0.951;DP=660;FS=3.499;HRun=0;HaplotypeScore=115.2793;InbreedingCoeff=0.8827;MQ=69.03;MQ0=5;MQRankSum=0.181;QD=10.73;ReadPosRankSum=0.278;VQSLOD=2.6914;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:84.12:0,84,1529	0/0:11,0:11:24.06:0,24,413	0/0:30,0:19:2.97:0,3,20	./.	1/1:15,8:23:15.05:236,15,0	1/1:6,10:16:24.08:378,24,0	1/1:14,5:19:9.03:142,9,0	0/0:28,0:28:29.93:0,30,390	0/0:23,0:23:29.93:0,30,601	0/0:25,0:25:33.97:0,34,555	0/0:14,0:13:18.03:0,18,319	0/0:24,0:25:36.07:0,36,625	0/0:21,0:21:15.02:0,15,269	0/0:30,0:29:33.10:0,33,655	0/0:25,0:25:36.04:0,36,561	0/0:28,0:29:44.87:0,45,893	0/0:29,1:31:21.70:0,22,1204	0/0:18,0:20:38.87:0,39,838	0/0:14,0:14:10.07:0,10,90	0/0:12,0:12:21.06:0,21,428	0/0:48,0:47:63.12:0,63,1137	0/0:18,0:18:24.03:0,24,413	0/0:23,0:22:24.07:0,24,491	0/0:25,0:25:51.13:0,51,994	0/0:18,0:18:23.82:0,24,466	0/0:18,0:18:24.06:0,24,478	0/0:15,0:15:23.96:0,24,391	0/0:16,0:15:23.91:0,24,486
chr10	110669354	.	ACT	A	4517.62	PASS	AB=0.988;AC=17;AF=0.304;AN=56;BaseQRankSum=-4.398;DP=707;FS=0.999;HRun=0;HaplotypeScore=101.6647;InbreedingCoeff=0.0840;MQ=66.71;MQ0=13;MQRankSum=-1.490;QD=12.34;ReadPosRankSum=-5.312;VQSLOD=3.5695;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,114,1444	0/0:12,0:12:20.66:0,21,245	0/0:26,0:13:36.91:0,37,346	0/0:36,0:26:30.99:0,31,474	0/0:21,0:20:42.84:0,43,281	0/0:16,0:16:32.36:0,32,196	0/0:21,0:21:53.02:0,53,407	1/1:30,0:30:35.65:574,36,0	0/0:15,0:15:35.04:0,35,586	0/0:30,0:30:49.22:0,49,772	0/0:13,0:12:29.22:0,29,327	0/1:36,0:36:11.96:473,0,12	1/1:22,0:22:11.21:306,11,0	0/1:26,0:26:69.47:249,0,69	0/1:26,1:27:14.69:386,0,15	0/0:29,0:29:71.28:0,71,979	0/0:33,0:33:54.08:0,54,1048	0/0:24,0:23:53.74:0,54,877	1/1:15,0:14:35.44:303,35,0	0/1:13,0:13:52.61:53,0,68	0/1:66,0:64:63.07:786,0,63	0/1:15,0:15:23.04:114,0,23	0/1:20,0:19:81.64:82,0,87	0/1:38,1:39:81.62:489,0,82	0/0:18,0:18:35.15:0,35,454	0/1:18,0:18:99:216,0,102	0/1:24,2:26:9.87:455,0,10	0/1:13,0:12:32.52:33,0,59
chr10	110669701	.	A	AT	2229.26	PASS	AB=0.798;AC=30;AF=0.536;AN=56;BaseQRankSum=4.165;DP=493;FS=13.671;HRun=13;HaplotypeScore=86.5267;InbreedingCoeff=0.6200;MQ=56.77;MQ0=7;MQRankSum=-5.981;QD=8.17;ReadPosRankSum=-4.886;VQSLOD=-0.1131;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:25:42.40:0,42,278	0/1:12,0:11:4.85:5,0,102	0/0:8,0:8:6.72:0,7,23	0/0:6,0:4:2.74:0,3,12	0/0:25,0:24:8.09:0,8,180	1/1:6,13:19:3.36:151,3,0	0/0:16,0:18:8.92:0,9,186	1/1:10,13:23:6.93:285,7,0	0/0:20,1:20:9.06:0,9,200	0/0:20,0:20:26.57:0,27,182	0/0:14,0:15:18.46:0,18,114	1/1:6,0:18:25.93:141,26,0	1/1:7,0:9:13.34:59,13,0	1/1:7,0:12:28.87:159,29,0	1/1:7,0:19:28.87:160,29,0	0/0:17,1:18:41.60:0,42,287	0/0:35,0:34:63.05:0,63,419	0/0:22,1:24:9.76:0,10,204	1/1:8,7:14:26.72:213,27,0	1/1:5,12:16:25.29:208,25,0	1/1:2,6:7:9.43:76,9,0	1/1:11,0:23:46.43:250,46,0	1/1:12,0:20:20.14:110,20,0	1/1:7,1:10:14.45:88,14,0	0/1:9,1:10:7.08:7,0,102	0/1:8,8:17:34.44:155,0,34	0/1:9,16:25:16.86:276,0,17	1/1:3,2:8:11.80:89,12,0
chr10	110672571	.	TTCTC	T	487.41	PASS	AB=1.000;AC=16;AF=0.364;AN=44;BaseQRankSum=2.923;DP=527;FS=16.199;HRun=0;HaplotypeScore=90.3099;InbreedingCoeff=0.2521;MQ=65.72;MQ0=22;MQRankSum=1.235;QD=2.41;ReadPosRankSum=0.914;VQSLOD=0.7806;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,7:19:3.01:46,3,0	./.	./.	./.	./.	1/1:27,0:26:12.04:158,12,0	./.	./.	1/1:13,5:17:5.98:66,6,0	0/0:14,0:14:15.01:0,15,175	0/0:17,0:15:6.02:0,6,116	0/1:21,0:20:0:0,0,0	0/0:15,0:15:9.29:0,9,105	0/0:17,0:17:9.50:0,9,132	0/0:27,0:26:9.92:0,10,162	0/1:26,0:26:26.39:26,0,240	0/1:22,0:20:47.09:47,0,132	1/1:10,0:10:6.02:89,6,0	0/0:16,0:15:14.16:0,14,149	0/0:14,0:12:3.01:0,3,35	0/0:30,0:28:4.56:0,5,34	0/0:10,0:9:8.85:0,9,97	0/1:4,0:4:5.87:6,0,41	0/0:19,0:17:6.02:0,6,86	1/1:14,0:14:9.02:108,9,0	0/1:19,0:19:19.51:53,0,20	0/1:19,0:17:18.08:29,0,18	0/0:5,0:4:1.82:0,2,5
chr10	110672617	.	CTCTGTG	C	591.87	PASS	AB=0.969;AC=16;AF=0.308;AN=52;BaseQRankSum=3.923;DP=455;FS=29.417;HRun=0;HaplotypeScore=95.3674;InbreedingCoeff=-0.0303;MQ=44.76;MQ0=35;MQRankSum=1.696;QD=2.38;ReadPosRankSum=1.429;VQSLOD=0.1153;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:6.29:0,6,454	0/0:5,0:5:9.92:0,10,147	./.	./.	0/1:13,0:12:0.04:0,0,1	1/1:32,0:28:22.33:247,22,0	0/1:23,0:20:37.69:71,0,38	0/0:25,0:22:26.87:0,27,334	0/0:16,0:15:22.42:0,22,334	0/0:11,0:10:29.23:0,29,356	0/0:13,0:10:21.07:0,21,382	0/0:16,0:14:8.78:0,9,124	0/1:17,0:16:16.67:17,0,164	0/1:19,0:19:6.81:7,0,142	0/0:21,0:20:10.24:0,10,151	0/1:24,0:22:17.82:18,0,629	0/1:21,0:17:55.73:56,0,399	0/1:11,0:8:25.20:25,0,119	0/0:14,0:14:34.17:0,34,419	0/0:15,0:13:17.65:0,18,254	0/1:21,0:19:1.24:1,0,431	0/1:13,0:11:12.57:13,0,63	0/1:11,0:9:16.97:18,0,17	0/0:19,0:12:5.85:0,6,103	1/1:14,0:11:17.15:152,17,0	0/1:12,4:13:83.93:84,0,157	0/1:11,3:14:38.01:38,0,306	0/0:12,0:9:15.94:0,16,230
chr10	110672619	.	C	CTGTGTGTGTGTG	980.43	PASS	AB=0.891;AC=12;AF=0.231;AN=52;BaseQRankSum=3.086;DP=489;FS=3.152;HRun=0;HaplotypeScore=154.4774;InbreedingCoeff=0.6269;MQ=44.69;MQ0=35;MQRankSum=-1.899;QD=7.32;ReadPosRankSum=-0.898;VQSLOD=2.3122;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:48.05:0,48,1112	0/0:7,0:7:17.47:0,17,440	./.	./.	0/0:14,0:13:12.04:0,12,374	0/0:32,0:28:41.10:0,41,1211	0/0:24,0:21:27.91:0,28,737	0/0:25,0:22:26.41:0,26,303	0/0:16,0:15:30.08:0,30,685	0/0:12,0:10:14.88:0,15,357	0/0:14,0:10:17.91:0,18,358	1/1:19,0:17:9.03:247,9,0	1/1:19,0:19:18.06:341,18,0	1/1:22,0:22:9.03:312,9,0	1/1:24,0:22:2.98:25,3,0	0/0:24,0:22:29.01:0,29,914	0/0:20,0:16:21.35:0,21,622	0/1:12,0:9:42.78:43,0,312	0/0:15,0:15:21.06:0,21,501	0/0:14,0:13:15.05:0,15,338	0/0:21,0:19:39.07:0,39,808	1/1:13,0:11:5.87:102,6,0	0/0:13,0:11:0:0,0,0	0/1:18,4:18:27.78:66,0,28	0/0:14,0:11:8.66:0,9,248	0/0:17,0:14:8.09:0,8,503	0/0:15,0:15:20.19:0,20,824	0/0:12,0:9:15.05:0,15,513
chr10	110672835	.	T	TC	12051.28	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-12.104;DP=618;FS=0.000;HRun=3;HaplotypeScore=62.1598;InbreedingCoeff=0.9612;MQ=84.65;MQ0=2;MQRankSum=0.234;QD=31.38;ReadPosRankSum=3.482;VQSLOD=4.7659;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.12:0,48,550	0/0:12,0:12:33.08:0,33,376	0/0:52,1:39:12.75:0,13,607	0/0:27,0:17:2.72:0,3,237	1/1:1,21:22:57.08:743,57,0	1/1:1,31:32:74.28:1046,74,0	1/1:2,22:24:54.18:755,54,0	1/1:2,33:35:96.28:1285,96,0	0/0:20,0:19:57.12:0,57,645	0/0:18,0:18:54.16:0,54,640	0/0:19,0:19:51.14:0,51,595	1/1:0,18:18:36.12:502,36,0	1/1:3,12:15:24.08:335,24,0	1/1:0,17:17:39.13:544,39,0	1/1:9,23:31:75.22:1013,75,0	0/0:19,0:19:57.16:0,57,662	0/0:30,0:30:90.18:0,90,1025	0/0:20,0:20:57.12:0,57,654	1/1:3,20:23:60.15:756,60,0	1/1:1,18:19:51.11:655,51,0	1/1:1,9:10:15.05:210,15,0	1/1:3,24:27:60.20:819,60,0	1/1:1,20:21:45.15:629,45,0	1/1:0,16:16:27.09:378,27,0	1/1:1,19:20:48.16:672,48,0	1/1:0,24:24:72.11:918,72,0	1/1:1,19:20:45.15:623,45,0	1/1:0,9:9:12.04:168,12,0
chr10	110678691	.	ATGTG	A	947.80	PASS	AB=0.904;AC=27;AF=0.540;AN=50;BaseQRankSum=2.732;DP=590;FS=0.000;HRun=0;HaplotypeScore=107.1622;InbreedingCoeff=0.5101;MQ=58.51;MQ0=11;MQRankSum=0.813;QD=3.02;ReadPosRankSum=-0.124;VQSLOD=1.2907;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:19.94:0,20,350	0/0:12,0:12:5.98:0,6,83	./.	./.	1/1:9,6:14:8.62:102,9,0	1/1:17,3:21:5.23:53,5,0	1/1:21,2:23:12.04:179,12,0	0/0:19,0:19:4.26:0,4,10	0/0:13,1:14:5.98:0,6,62	0/0:23,0:23:9.03:0,9,175	0/0:9,0:9:6.01:0,6,87	1/1:18,0:27:2.40:27,2,0	1/1:18,0:18:5.19:27,5,0	0/0:18,0:18:4.32:0,4,70	1/1:13,0:24:2.54:27,3,0	0/0:30,0:30:26.98:0,27,602	0/0:15,0:15:18.06:0,18,385	0/0:19,0:19:32.65:0,33,533	./.	1/1:26,5:31:9.18:133,9,0	0/1:34,1:35:11.04:161,0,11	1/1:12,0:19:0.47:1,0,0	0/1:8,0:8:26.11:40,0,26	0/1:11,0:16:0.01:0,0,0	1/1:14,3:18:4.26:49,4,0	1/1:18,3:21:6.02:89,6,0	1/1:11,9:20:8.57:132,9,0	1/1:8,7:15:6.02:92,6,0
chr10	110679298	.	GT	G	4479.43	PASS	AB=0.536;AC=20;AF=0.357;AN=56;BaseQRankSum=8.982;DP=648;FS=27.189;HRun=11;HaplotypeScore=94.3835;InbreedingCoeff=0.8462;MQ=76.93;MQ0=2;MQRankSum=3.056;QD=18.66;ReadPosRankSum=1.819;VQSLOD=3.9442;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:19:26.40:0,26,470	0/0:6,0:7:14.87:0,15,142	0/0:38,2:20:5.85:0,6,176	0/0:45,1:25:13.69:0,14,148	1/1:2,16:18:17.20:339,17,0	1/1:1,23:24:65.91:542,66,0	1/1:1,19:20:41.95:345,42,0	1/1:5,21:27:64.78:505,65,0	0/0:15,0:15:42.11:0,42,448	0/0:23,0:23:60.13:0,60,624	0/0:24,0:24:69.15:0,69,716	0/0:20,0:20:20.41:0,20,397	0/0:24,0:25:46.18:0,46,453	0/0:22,0:23:59.98:0,60,621	0/0:22,0:23:48.83:0,49,500	0/0:29,0:29:80.73:0,81,819	0/0:25,0:27:62.83:0,63,636	0/0:15,0:15:42.02:0,42,424	1/1:4,19:22:53.71:427,54,0	0/1:3,18:21:7.15:351,0,7	1/1:0,4:4:11.99:98,12,0	0/0:19,1:20:26.34:0,26,451	0/0:20,1:21:27.31:0,27,468	0/0:30,0:30:74.30:0,74,827	1/1:2,21:23:59.42:477,59,0	1/1:8,27:36:24.84:596,25,0	1/1:7,27:35:85.88:694,86,0	0/1:1,7:8:5.70:105,0,6
chr10	110679329	.	T	TTTCCTTCCTTCCTTCC	13315.66	PASS	AB=0.983;AC=35;AF=0.648;AN=54;BaseQRankSum=7.000;DP=733;FS=4.886;HRun=0;HaplotypeScore=319.6190;InbreedingCoeff=0.6198;MQ=58.85;MQ0=6;MQRankSum=-6.284;QD=25.03;ReadPosRankSum=-2.731;VQSLOD=2.8531;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:30.07:0,30,715	0/0:11,0:11:24.05:0,24,728	0/1:43,0:19:0:0,0,0	./.	1/1:23,0:27:41.81:623,42,0	0/1:28,0:30:12.74:713,0,13	1/1:23,0:23:19.64:293,20,0	1/1:35,0:33:33.78:328,34,0	0/0:22,0:22:42.10:0,42,1294	0/0:25,0:25:54.14:0,54,1500	0/0:23,0:23:39.11:0,39,1392	1/1:19,0:19:41.96:780,42,0	1/1:7,16:33:4.14:229,4,0	1/1:27,0:27:53.89:1438,54,0	1/1:31,0:31:66.18:1260,66,0	0/0:21,0:21:45.13:0,45,1409	0/0:32,0:32:58.89:0,59,1480	0/1:24,0:24:7.85:8,0,1427	1/1:24,0:23:35.13:723,35,0	1/1:27,0:27:48.01:754,48,0	1/1:5,0:5:8.99:225,9,0	1/1:26,0:26:57.07:1009,57,0	1/1:28,0:28:52.99:1171,53,0	0/1:35,0:35:95.10:1379,0,95	1/1:18,0:20:21.72:636,22,0	0/1:39,0:38:70.92:1148,0,71	1/1:28,0:28:36.06:551,36,0	1/1:7,0:7:5.99:48,6,0
chr10	110680579	.	C	CA	6920.10	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-13.332;DP=612;FS=2.031;HRun=2;HaplotypeScore=53.4754;InbreedingCoeff=0.9870;MQ=67.15;MQ0=1;MQRankSum=0.274;QD=42.45;ReadPosRankSum=2.084;VQSLOD=4.7146;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.21:0,66,856	0/0:6,0:6:18.06:0,18,234	0/0:15,0:15:22.73:0,23,468	0/0:10,0:10:30.07:0,30,354	0/0:23,0:23:69.22:0,69,894	0/0:24,0:24:69.22:0,69,891	0/0:25,0:25:75.22:0,75,957	0/0:24,0:24:69.22:0,69,884	0/0:17,0:17:51.17:0,51,662	0/0:23,0:23:69.22:0,69,885	0/0:36,0:36:99:0,108,1402	1/1:1,26:27:81.27:1205,81,0	1/1:1,25:25:72.24:1079,72,0	1/1:0,27:27:78.26:1167,78,0	1/1:1,23:24:69.23:1033,69,0	0/0:25,0:25:75.24:0,75,974	0/0:31,0:30:84.25:0,84,1074	0/0:9,0:9:24.08:0,24,311	0/0:19,0:19:51.17:0,51,661	0/0:22,0:22:66.21:0,66,856	0/0:22,0:21:63.20:0,63,817	1/1:0,17:17:48.12:694,48,0	1/1:1,24:25:69.23:1034,69,0	1/1:0,17:17:48.16:707,48,0	0/0:30,0:30:90.29:0,90,1168	0/0:25,0:25:75.24:0,75,962	0/0:37,0:36:99:0,111,1439	0/0:3,0:3:8.98:0,9,84
chr10	110683980	.	AT	A	2830.94	PASS	AB=0.592;AC=20;AF=0.370;AN=54;BaseQRankSum=10.894;DP=445;FS=0.994;HRun=10;HaplotypeScore=51.4006;InbreedingCoeff=0.8181;MQ=55.68;MQ0=17;MQRankSum=0.346;QD=17.37;ReadPosRankSum=2.531;VQSLOD=4.2081;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.08:0,60,623	0/0:4,0:4:8.99:0,9,82	0/0:71,1:12:9.16:0,9,76	0/0:60,0:10:14.65:0,15,91	1/1:1,19:20:53.95:462,54,0	1/1:5,7:11:17.99:156,18,0	0/1:3,4:7:18.20:89,0,18	1/1:2,17:19:50.79:413,51,0	0/0:5,0:5:12.03:0,12,133	0/0:17,0:17:45.12:0,45,491	0/0:17,0:17:42.11:0,42,464	0/0:5,0:5:15.04:0,15,166	0/0:10,0:10:21.06:0,21,232	0/0:5,0:4:12.02:0,12,124	0/0:9,0:9:21.04:0,21,223	0/0:6,0:6:18.03:0,18,190	0/0:24,0:24:60.15:0,60,654	0/0:15,0:14:33.05:0,33,352	1/1:5,11:16:32.96:281,33,0	1/1:3,11:14:32.99:286,33,0	1/1:2,9:11:20.99:182,21,0	./.	0/0:5,0:5:9.02:0,9,99	0/0:3,0:3:9.02:0,9,100	1/1:2,18:20:41.99:365,42,0	0/1:3,14:17:2.94:314,0,3	1/1:3,16:19:32.97:282,33,0	1/1:0,8:8:24:208,24,0
chr10	110684895	.	TTTG	T	1260.67	PASS	AB=0.952;AC=25;AF=0.463;AN=54;BaseQRankSum=3.281;DP=480;FS=4.458;HRun=0;HaplotypeScore=86.2100;InbreedingCoeff=0.3634;MQ=49.24;MQ0=21;MQRankSum=-1.863;QD=5.63;ReadPosRankSum=-0.768;VQSLOD=1.7933;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:44:40.99:0,41,647	0/1:6,0:6:21.24:21,0,86	0/0:54,0:14:29.57:0,30,200	0/0:59,0:10:20.31:0,20,169	1/1:16,0:15:33.35:184,33,0	0/1:17,0:17:23.87:24,0,69	1/1:6,0:6:12.01:64,12,0	1/1:22,0:20:4.80:210,5,0	0/0:11,0:11:26.73:0,27,232	0/0:15,0:15:41.29:0,41,319	0/0:16,0:15:41.19:0,41,334	0/0:6,0:6:13.23:0,13,90	0/1:14,0:14:45.23:45,0,111	0/1:10,0:10:14.05:14,0,130	0/1:10,0:10:10.79:11,0,76	0/0:12,0:12:32.18:0,32,251	0/0:25,1:24:19.14:0,19,530	0/1:14,0:13:4.63:5,0,182	1/1:17,0:18:24.95:258,25,0	0/1:5,16:21:5.88:36,0,6	1/1:3,0:3:5.88:35,6,0	0/1:9,0:9:7.39:7,0,121	0/0:10,0:10:12.10:0,12,119	0/1:21,0:21:0.71:1,0,158	1/1:11,1:11:17.66:123,18,0	1/1:15,0:17:29:284,29,0	1/1:6,0:8:19.95:127,20,0	./.
chr10	110684896	.	TTG	T	1555.28	PASS	AB=0.971;AC=29;AF=0.537;AN=54;BaseQRankSum=3.555;DP=472;FS=46.807;HRun=0;HaplotypeScore=78.4634;InbreedingCoeff=0.3406;MQ=49.41;MQ0=21;MQRankSum=0.333;QD=6.25;ReadPosRankSum=-1.329;VQSLOD=0.9692;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:3.31:0,3,402	0/1:6,0:6:8.03:8,0,68	0/0:54,0:14:29.04:0,29,183	0/0:59,0:10:20.17:0,20,146	1/1:15,1:15:33.21:185,33,0	1/1:16,0:16:13.14:125,13,0	1/1:6,0:6:17.41:101,17,0	1/1:7,13:19:40.85:275,41,0	0/0:11,0:11:26.36:0,26,166	0/0:15,0:15:33.51:0,34,213	0/0:16,0:15:39.60:0,40,225	0/1:7,0:7:10.73:11,0,45	0/1:13,0:14:45.82:46,0,105	0/1:9,1:10:5.17:5,0,96	0/1:9,0:9:5.43:5,0,69	0/0:13,0:13:21.99:0,22,171	0/1:23,1:22:4.18:4,0,302	0/1:13,0:13:27.48:27,0,95	1/1:4,12:17:43.67:299,44,0	1/1:18,1:20:8.31:44,8,0	1/1:3,0:3:5.88:35,6,0	0/0:8,0:9:2.96:0,3,98	0/1:10,0:10:4.67:5,0,115	0/1:20,0:20:30.51:31,0,124	1/1:12,0:11:20.59:132,21,0	1/1:16,0:17:44.22:293,44,0	1/1:7,0:8:19.89:111,20,0	./.
chr10	110685096	.	CATCTATCTATCT	C	5551.95	PASS	AB=0.923;AC=35;AF=0.625;AN=56;BaseQRankSum=8.494;DP=261;FS=0.639;HRun=0;HaplotypeScore=100.6859;InbreedingCoeff=0.7224;MQ=55.88;MQ0=7;MQRankSum=-7.474;QD=36.77;ReadPosRankSum=-0.117;VQSLOD=4.3091;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:22:54.19:0,54,2562	0/0:6,0:6:12.04:0,12,689	0/0:17,0:12:9.01:0,9,217	0/0:12,0:7:6.02:0,6,97	1/1:0,4:4:6.91:121,7,0	1/1:9,9:18:26.12:522,26,0	1/1:7,1:8:15.03:283,15,0	1/1:7,4:9:12.03:235,12,0	0/0:9,0:9:21.07:0,21,1159	0/0:12,0:11:30.10:0,30,1558	0/0:10,0:10:27.09:0,27,1119	1/1:8,3:11:30.10:823,30,0	1/1:2,2:4:9.03:229,9,0	1/1:3,1:4:6.02:190,6,0	1/1:6,0:6:9.03:272,9,0	0/0:0,0:6:3.01:0,3,157	0/0:8,0:8:15.05:0,15,784	0/0:8,0:7:11.07:0,11,398	1/1:6,0:5:5.61:49,6,0	1/1:13,1:14:32.14:592,32,0	1/1:3,0:2:2.99:24,3,0	1/1:7,2:9:8.06:127,8,0	1/1:9,1:10:11.07:234,11,0	1/1:6,0:6:9.02:143,9,0	1/1:8,5:12:27.09:503,27,0	0/1:11,1:12:99:691,0,197	1/1:9,1:10:21.06:432,21,0	1/1:2,0:2:3.01:83,3,0
chr10	110685118	.	TCTATCTA	T	1551.62	PASS	AB=0.867;AC=21;AF=0.389;AN=54;BaseQRankSum=11.095;DP=344;FS=6.436;HRun=0;HaplotypeScore=111.7945;InbreedingCoeff=0.0643;MQ=41.92;MQ0=14;MQRankSum=-8.275;QD=8.97;ReadPosRankSum=1.177;VQSLOD=1.9225;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.12:0,69,2157	0/0:4,0:4:12.04:0,12,501	0/0:31,0:6:18.06:0,18,315	0/0:32,0:10:23.22:0,23,276	1/1:8,0:8:6.67:37,7,0	1/1:14,1:16:15.59:161,16,0	0/1:8,2:10:41.54:63,0,42	0/1:16,0:14:26.16:26,0,346	0/0:13,0:13:36.12:0,36,1106	0/0:16,0:15:45.15:0,45,1414	0/0:13,0:13:39.13:0,39,1166	1/1:9,3:12:25.76:339,26,0	0/1:6,1:7:27.92:76,0,28	0/1:4,1:5:63.59:78,0,64	0/1:7,2:9:89.88:116,0,90	0/0:6,0:6:3.01:0,3,106	0/0:12,0:12:33.11:0,33,868	0/0:9,0:8:24.08:0,24,550	0/0:7,0:5:7.38:0,7,114	1/1:18,2:21:4.36:166,4,0	./.	0/1:5,4:9:34.24:34,0,58	0/1:6,3:9:57.99:95,0,58	0/1:5,1:6:24.21:24,0,30	1/1:13,0:13:22.68:132,23,0	0/1:12,0:14:99:236,0,267	0/1:12,0:11:57.49:128,0,57	0/1:4,0:2:17.13:17,0,33
chr10	110685141	.	T	TTC	1555.24	PASS	AB=0.930;AC=28;AF=0.500;AN=56;BaseQRankSum=6.706;DP=474;FS=4.014;HRun=0;HaplotypeScore=110.7698;InbreedingCoeff=0.1172;MQ=37.52;MQ0=28;MQRankSum=-7.435;QD=5.12;ReadPosRankSum=-3.128;VQSLOD=2.1519;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:29.73:0,30,487	0/0:4,0:4:9.03:0,9,106	1/1:48,0:6:2.84:14,3,0	0/0:74,0:11:5.50:0,6,38	0/1:11,0:11:16.69:60,0,17	1/1:24,0:24:18.57:151,19,0	1/1:12,0:12:8.25:48,8,0	0/1:26,0:25:0.26:1,0,0	0/0:14,0:14:20.95:0,21,228	0/0:18,0:18:13.30:0,13,310	0/1:12,0:13:0.41:0,0,252	1/1:13,0:13:11.93:111,12,0	0/1:5,6:11:27.78:42,0,28	0/1:6,1:7:23.30:106,0,23	0/1:18,0:18:11.34:261,0,11	0/0:8,0:8:11.71:0,12,117	0/0:16,0:16:36.04:0,36,423	0/0:12,0:12:32.67:0,33,352	0/1:7,0:6:12.05:37,0,12	0/1:22,0:22:9.66:111,0,10	1/1:4,0:3:1.25:3,1,0	0/1:11,0:11:18.86:213,0,19	1/1:10,1:11:13.61:209,14,0	0/1:3,4:6:29.32:37,0,29	0/1:17,0:16:12.15:15,0,12	0/1:18,0:17:17.03:107,0,17	1/1:16,0:16:9.36:186,9,0	1/1:6,0:4:2.88:15,3,0
chr10	110685160	.	T	TCG	887.16	PASS	AB=0.970;AC=18;AF=0.321;AN=56;BaseQRankSum=4.873;DP=528;FS=3.571;HRun=0;HaplotypeScore=116.1276;InbreedingCoeff=-0.2156;MQ=42.73;MQ0=41;MQRankSum=-6.146;QD=3.81;ReadPosRankSum=0.331;VQSLOD=2.2536;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:59.59:0,60,779	0/0:4,0:4:12.03:0,12,161	0/0:53,0:8:18.32:0,18,119	0/0:93,0:12:16.32:0,16,147	0/1:7,0:7:14.80:15,0,34	0/1:17,3:19:9.12:140,0,9	0/1:12,0:12:10.50:13,0,11	0/1:27,0:24:97.89:98,0,243	0/0:12,0:12:30.03:0,30,370	0/0:19,0:18:18.39:0,18,603	0/0:12,0:12:31:0,31,402	0/1:13,0:13:15.85:30,0,16	0/0:16,0:16:0.17:0,0,146	0/1:10,0:10:33.12:47,0,33	0/1:22,0:22:41.63:113,0,42	0/0:7,0:7:18.04:0,18,225	0/0:21,0:21:53.75:0,54,678	0/0:16,0:14:44.96:0,45,562	1/1:8,0:7:7.45:85,7,0	0/1:20,2:22:53.47:53,0,94	1/1:6,0:5:0.88:3,1,0	0/1:16,0:15:29.80:109,0,30	0/1:18,0:16:52.32:85,0,52	0/1:10,0:9:17.01:17,0,62	0/0:17,0:14:11.78:0,12,45	0/1:17,2:18:99:109,0,110	0/1:15,2:16:62.45:117,0,62	0/1:6,0:5:10.87:11,0,14
chr10	110685162	.	TCG	T	1490.35	PASS	AB=0.921;AC=22;AF=0.393;AN=56;BaseQRankSum=8.098;DP=517;FS=15.599;HRun=0;HaplotypeScore=102.6704;InbreedingCoeff=-0.1207;MQ=44.18;MQ0=46;MQRankSum=-8.004;QD=5.09;ReadPosRankSum=-0.867;VQSLOD=1.9126;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:39.79:0,40,860	0/0:4,0:4:11.98:0,12,160	0/1:52,0:8:7.08:7,0,40	0/0:90,0:9:5.12:0,5,42	1/1:4,3:7:0.58:115,1,0	1/1:11,6:16:11.33:180,11,0	0/1:6,4:10:13.60:143,0,14	0/1:25,0:22:99:117,0,211	0/0:10,0:10:22.31:0,22,366	0/0:19,0:18:13.04:0,13,585	0/1:14,0:14:1.47:1,0,430	0/1:13,0:13:36.41:36,0,52	0/0:14,0:14:20.28:0,20,162	0/1:10,0:10:31.26:31,0,69	0/1:22,0:22:11.28:11,0,129	0/0:7,0:7:18.01:0,18,270	0/0:23,0:21:36.72:0,37,777	0/0:16,0:14:8.19:0,8,607	0/1:7,1:7:48.71:49,0,99	1/1:11,9:20:26.04:360,26,0	1/1:5,1:5:0.16:1,0,0	0/0:16,0:15:8.22:0,8,93	0/1:18,0:16:9.70:10,0,74	0/1:10,0:9:8.83:9,0,69	0/1:13,4:14:27.90:144,0,28	0/1:15,4:18:60.22:155,0,60	0/1:12,5:15:12.13:249,0,12	0/1:7,1:5:17.79:34,0,18
chr10	110685171	.	CTT	C	1181.07	PASS	AB=0.986;AC=12;AF=0.214;AN=56;BaseQRankSum=8.335;DP=518;FS=10.315;HRun=3;HaplotypeScore=94.3410;InbreedingCoeff=0.1855;MQ=43.26;MQ0=63;MQRankSum=-8.337;QD=8.75;ReadPosRankSum=3.018;VQSLOD=-0.3067;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:52.51:0,53,863	0/0:4,0:4:11.98:0,12,131	0/0:48,0:8:18.52:0,19,176	0/0:82,0:7:10.04:0,10,97	0/1:7,1:7:2.84:112,0,3	1/1:16,1:15:7.38:174,7,0	0/1:10,0:10:16.90:140,0,17	0/0:22,0:15:27.46:0,27,225	0/0:10,0:9:24.07:0,24,411	0/0:21,0:18:54.04:0,54,942	0/0:15,0:14:29.99:0,30,438	0/0:12,0:12:13.41:0,13,157	0/0:14,0:13:24.04:0,24,385	0/1:10,0:10:17.21:17,0,154	0/0:23,0:21:34.62:0,35,375	0/0:11,0:10:23.99:0,24,378	0/0:25,0:20:34.89:0,35,867	0/0:20,0:18:42.31:0,42,805	0/1:9,0:8:47.35:47,0,80	1/1:16,2:18:5.72:307,6,0	0/0:7,1:5:0.37:0,0,1	0/0:15,0:14:11.81:0,12,237	0/0:17,0:15:25.21:0,25,340	0/0:11,0:9:9.46:0,9,120	0/1:18,0:10:7.22:140,0,7	0/1:21,0:16:68.95:142,0,69	0/1:18,0:13:6.64:220,0,7	0/1:6,0:4:32.25:32,0,46
chr10	110686084	.	T	TTGTGTGTGTG	5851.22	PASS	AB=1.000;AC=24;AF=0.444;AN=54;BaseQRankSum=-3.924;DP=589;FS=0.000;HRun=0;HaplotypeScore=170.4111;InbreedingCoeff=0.8355;MQ=66.92;MQ0=9;MQRankSum=-7.364;QD=21.35;ReadPosRankSum=-5.742;VQSLOD=2.2115;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:26.90:0,27,600	0/0:7,0:7:12.04:0,12,359	./.	0/1:22,0:15:0:0,0,0	1/1:12,0:21:12.04:271,12,0	1/1:5,0:13:9.03:231,9,0	1/1:14,0:21:12.03:257,12,0	1/1:33,0:31:36.11:706,36,0	0/0:21,0:21:42.12:0,42,1001	0/0:10,0:21:33.08:0,33,611	0/0:7,0:23:12.09:0,12,588	0/0:27,0:28:48.16:0,48,1291	0/0:18,0:18:27.09:0,27,779	0/0:20,0:21:36.11:0,36,936	0/0:29,0:29:57.19:0,57,1526	0/0:10,0:10:15.04:0,15,340	0/0:35,0:35:63.14:0,63,1611	0/0:21,0:20:24.07:0,24,647	1/1:18,0:16:11.49:136,11,0	1/1:8,12:23:24.08:1194,24,0	1/1:24,0:23:9.03:169,9,0	0/0:11,0:11:12.03:0,12,265	0/1:20,0:20:13.33:13,0,961	0/0:16,0:16:36.09:0,36,970	1/1:9,0:20:12.04:333,12,0	1/1:9,8:19:29.71:810,30,0	1/1:14,10:30:29.27:1432,29,0	1/1:3,3:8:6.02:299,6,0
chr10	110686798	.	G	GGGGCTGACTGGTACTGGTTTGGGGC	33825.47	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.891;DP=735;FS=4.770;HRun=0;HaplotypeScore=485.6881;InbreedingCoeff=0.9931;MQ=80.93;MQ0=0;MQRankSum=-17.091;QD=98.62;ReadPosRankSum=-0.247;VQSLOD=3.7871;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,5810	0/0:14,0:14:42.13:0,42,2494	0/0:27,0:27:72.22:0,72,3329	0/0:22,0:22:57.17:0,57,2592	1/1:18,0:42:33.10:1296,33,0	1/1:24,0:44:64.71:4523,65,0	1/1:29,0:29:69.20:3270,69,0	1/1:42,0:42:99:4244,112,0	0/0:17,0:17:45.15:0,45,2187	0/0:33,0:33:96.31:0,96,5474	0/0:24,0:24:66.21:0,66,3444	0/0:20,0:20:57.18:0,57,3128	0/0:20,0:20:57.18:0,57,2811	0/0:27,0:27:78.27:0,78,4559	0/0:27,0:27:75.24:0,75,3957	0/0:21,0:21:54.19:0,54,3137	0/0:26,0:26:69.22:0,69,4350	0/0:15,0:15:41.14:0,41,2125	1/1:24,0:24:51.38:3565,51,0	1/1:16,0:31:23.55:2313,24,0	1/1:17,0:17:37.37:2282,37,0	0/0:23,0:23:69.24:0,69,3992	0/0:22,0:22:60.21:0,60,3650	0/0:15,0:15:33.11:0,33,1887	1/1:17,0:36:55.64:4129,56,0	1/1:12,1:28:29.47:3944,29,0	1/1:21,0:37:44.04:3460,44,0	1/1:3,0:13:10.28:800,10,0
chr10	110686805	.	AC	A	1044.71	PASS	AB=0.735;AC=4;AF=0.071;AN=56;BaseQRankSum=9.677;DP=617;FS=0.626;HRun=2;HaplotypeScore=103.2880;InbreedingCoeff=-0.0782;MQ=85.72;MQ0=0;MQRankSum=-8.297;QD=10.45;ReadPosRankSum=-1.343;VQSLOD=1.1696;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,1795	0/0:13,0:13:36.12:0,36,539	0/0:26,0:26:78.26:0,78,1157	0/0:22,0:22:66.18:0,66,942	0/0:22,0:22:15.04:0,15,210	0/0:24,0:24:63.16:0,63,884	0/1:20,7:27:99:161,0,560	0/1:21,19:40:99:650,0,695	0/0:17,0:17:48.16:0,48,719	0/0:31,0:31:93.31:0,93,1382	0/0:23,0:23:69.23:0,69,1034	0/0:21,0:21:60.19:0,60,881	0/0:19,0:19:57.19:0,57,846	0/0:28,0:28:81.25:0,81,1171	0/0:26,0:26:75.25:0,75,1123	0/0:19,0:19:57.19:0,57,852	0/0:24,0:24:72.24:0,72,1079	0/0:16,0:16:45.15:0,45,670	0/1:12,5:17:99:146,0,442	0/0:20,0:20:39.13:0,39,569	0/1:9,7:16:99:197,0,188	0/0:23,0:23:69.23:0,69,1033	0/0:24,0:24:68.34:0,68,1031	0/0:15,0:15:42.14:0,42,630	0/0:25,0:25:63.08:0,63,838	0/0:12,0:12:36.12:0,36,537	0/0:19,0:19:42.14:0,42,626	0/0:6,0:6:15.05:0,15,223
chr10	110687928	.	CGTGTGTGCGTGTGTGTGTGTGT	C	2536.49	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=2.434;DP=547;FS=30.245;HRun=0;HaplotypeScore=261.9721;InbreedingCoeff=0.8804;MQ=54.00;MQ0=12;MQRankSum=-6.116;QD=13.56;ReadPosRankSum=0.401;VQSLOD=1.0189;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:75.37:0,75,2994	0/0:9,0:9:27.08:0,27,1528	0/0:39,0:21:12.41:0,12,259	0/1:45,0:24:2.81:3,0,396	1/1:11,1:12:9:178,9,0	1/1:3,17:20:12.04:482,12,0	1/1:13,0:13:5.96:45,6,0	1/1:9,0:8:17.96:162,18,0	0/0:10,0:9:27.08:0,27,1431	0/0:28,0:28:78.07:0,78,3115	0/0:16,0:16:39.04:0,39,1987	0/0:22,0:22:63.17:0,63,4014	0/0:18,0:18:48.08:0,48,2055	0/0:21,0:21:45.99:0,46,2984	0/0:26,0:26:66.07:0,66,3800	0/0:16,0:16:33.94:0,34,2140	0/0:29,0:29:75.61:0,76,4523	0/0:22,0:22:57.09:0,57,3403	1/1:3,1:4:9:245,9,0	1/1:3,19:22:15.05:566,15,0	1/1:20,0:19:14.94:119,15,0	0/0:29,0:29:75.12:0,75,3768	0/0:17,0:16:42.08:0,42,2971	0/0:27,0:26:69.06:0,69,4616	1/1:11,0:10:8.95:69,9,0	1/1:15,1:16:35.76:451,36,0	1/1:12,1:12:26.88:381,27,0	1/1:2,0:2:5.99:48,6,0
chr10	110687936	.	CGT	C	384.94	PASS	AB=0.907;AC=21;AF=0.525;AN=40;BaseQRankSum=4.552;DP=538;FS=4.455;HRun=0;HaplotypeScore=88.5512;InbreedingCoeff=-0.3523;MQ=52.08;MQ0=16;MQRankSum=1.310;QD=1.19;ReadPosRankSum=0.958;VQSLOD=1.5671;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:39,1:39:36.59:37,0,340	0/1:10,0:10:17.22:17,0,143	./.	./.	./.	1/1:18,0:18:2.68:11,3,0	0/1:9,0:9:0:0,0,0	./.	0/1:5,0:12:12.05:53,0,12	0/0:30,0:30:24.96:0,25,299	0/1:15,0:15:15.10:15,0,184	0/1:24,1:24:5.52:6,0,555	0/1:14,4:18:45.29:45,0,175	0/1:20,2:22:9.19:9,0,330	0/0:29,0:29:0.46:0,0,393	0/1:11,6:17:78.72:79,0,89	0/1:30,0:30:24.94:25,0,638	0/1:18,5:23:41.24:41,0,392	1/1:4,0:4:2.84:14,3,0	1/1:20,0:20:8.22:36,8,0	./.	0/1:30,0:30:92.90:93,0,255	0/1:16,1:16:16.02:16,0,374	0/0:27,1:27:14.07:0,14,521	./.	1/1:12,0:12:2.84:14,3,0	./.	./.
chr10	110688115	.	CTGG	C	669.91	PASS	AB=0.848;AC=6;AF=0.107;AN=56;BaseQRankSum=9.397;DP=662;FS=71.070;HRun=0;HaplotypeScore=132.8394;InbreedingCoeff=-0.1124;MQ=56.45;MQ0=0;MQRankSum=-8.605;QD=5.00;ReadPosRankSum=2.352;VQSLOD=-0.2758;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.29:0,84,2042	0/0:14,0:14:42.14:0,42,1034	0/0:6,0:6:17.41:0,17,262	0/1:13,0:11:2.47:2,0,346	0/1:13,3:16:46.45:46,0,881	0/0:23,1:24:30.82:0,31,1386	0/0:24,0:24:66.23:0,66,1567	0/0:37,1:38:52.74:0,53,2309	0/0:27,0:26:78.25:0,78,1852	0/0:17,0:17:51.17:0,51,1229	0/0:14,0:14:42.14:0,42,986	0/0:41,0:41:99:0,123,2990	0/0:23,0:23:69.24:0,69,1651	0/0:36,0:36:99:0,108,2554	0/0:30,0:30:90.30:0,90,2169	0/0:17,0:17:51.16:0,51,1208	0/0:28,0:28:84.24:0,84,1967	0/0:17,0:17:51.16:0,51,1177	0/0:22,0:22:66.22:0,66,1541	0/1:17,3:20:87.38:87,0,1140	0/0:42,2:44:72.10:0,72,2851	0/0:17,0:17:51.16:0,51,1166	0/0:18,0:18:54.14:0,54,1196	0/0:28,0:28:84.29:0,84,2018	0/1:19,6:25:99:151,0,1235	0/1:13,8:21:99:270,0,777	0/1:32,7:39:99:231,0,2146	0/0:13,0:13:39.13:0,39,961
chr10	110688552	.	CT	C	1967.43	PASS	AB=0.656;AC=20;AF=0.357;AN=56;BaseQRankSum=1.775;DP=628;FS=12.963;HRun=14;HaplotypeScore=84.8361;InbreedingCoeff=0.7258;MQ=66.05;MQ0=8;MQRankSum=1.215;QD=8.48;ReadPosRankSum=2.690;VQSLOD=1.5241;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:93.52:0,94,845	0/0:10,0:10:17.92:0,18,155	0/0:21,0:11:14.84:0,15,110	0/0:22,0:13:2.25:0,2,72	1/1:8,12:23:24.57:230,25,0	1/1:5,11:17:6.61:200,7,0	1/1:2,16:19:12.72:224,13,0	1/1:18,10:27:6.65:176,7,0	0/0:11,0:11:20.95:0,21,177	0/0:19,1:20:15.04:0,15,265	0/0:24,0:24:40.48:0,40,383	0/0:12,0:25:28.95:0,29,172	0/0:4,0:14:20.20:0,20,124	0/0:8,0:23:22.60:0,23,136	0/0:7,0:28:34.86:0,35,188	0/0:21,1:23:30.32:0,30,395	0/0:31,2:34:24.64:0,25,488	0/0:25,0:24:29.22:0,29,402	0/1:12,16:28:3.26:271,0,3	0/1:12,10:23:16.06:158,0,16	1/1:8,13:22:0.93:142,1,0	0/0:11,0:21:26.13:0,26,218	0/0:5,0:15:14.37:0,14,85	0/0:7,0:29:28.86:0,29,177	1/1:4,11:15:1.84:157,2,0	1/1:6,14:21:17.35:249,17,0	1/1:4,17:25:25.13:265,25,0	1/1:0,8:10:13.94:88,14,0
chr10	110689470	.	TGG	T	2467.18	PASS	AB=0.604;AC=22;AF=0.393;AN=56;BaseQRankSum=8.081;DP=420;FS=1.525;HRun=12;HaplotypeScore=72.7192;InbreedingCoeff=0.8369;MQ=84.18;MQ0=0;MQRankSum=-1.508;QD=13.94;ReadPosRankSum=4.070;VQSLOD=2.4657;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:14:22.09:0,22,243	0/0:12,0:12:24.03:0,24,291	0/0:27,0:19:17.84:0,18,192	0/0:17,1:15:16.16:0,16,165	1/1:7,10:21:24.55:332,25,0	1/1:3,7:13:35.74:321,36,0	1/1:5,8:14:28.60:273,29,0	1/1:10,5:15:17.33:153,17,0	0/0:13,0:13:30.06:0,30,376	0/0:21,0:24:20.17:0,20,341	0/0:13,0:13:24.08:0,24,353	0/0:10,0:10:18.04:0,18,219	0/0:10,0:11:23.42:0,23,213	0/0:11,0:12:20.53:0,21,238	0/0:12,0:13:32.58:0,33,430	0/0:14,0:16:35.06:0,35,396	0/1:5,1:15:29.68:30,0,46	0/0:10,0:12:31.55:0,32,360	1/1:2,7:10:23.61:208,24,0	1/1:3,9:15:39.01:300,39,0	1/1:6,4:13:14.75:120,15,0	0/0:14,0:14:20.52:0,21,226	0/0:16,0:16:24.53:0,25,326	0/0:13,0:16:35.54:0,36,414	0/1:5,5:14:16.95:140,0,17	1/1:10,12:25:53.63:464,54,0	1/1:6,8:17:25.56:211,26,0	1/1:0,4:5:14.95:134,15,0
chr10	110689483	.	T	TA	4592.52	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=3.851;DP=479;FS=6.470;HRun=8;HaplotypeScore=75.5749;InbreedingCoeff=0.9681;MQ=77.03;MQ0=0;MQRankSum=-0.080;QD=23.55;ReadPosRankSum=1.907;VQSLOD=5.6252;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:20.83:0,21,190	0/0:11,0:11:26.97:0,27,238	0/0:31,0:18:11.50:0,12,238	0/0:22,0:18:6.41:0,6,102	1/1:14,10:24:62.51:598,63,0	1/1:5,15:20:32.98:335,33,0	1/1:12,6:18:41.48:452,41,0	1/1:5,15:20:20.72:472,21,0	0/0:13,0:13:26.93:0,27,235	0/0:19,0:20:38.20:0,38,325	0/0:17,0:17:35.99:0,36,320	0/0:15,0:15:20.95:0,21,184	0/0:13,0:13:23.95:0,24,212	0/0:14,0:14:35.96:0,36,308	0/0:19,0:19:41.98:0,42,374	0/0:16,0:16:36:0,36,325	0/0:18,0:18:44.97:0,45,395	0/0:13,0:13:32.93:0,33,286	1/1:2,11:13:35.96:373,36,0	1/1:11,9:20:53.54:491,54,0	1/1:7,3:10:17.97:175,18,0	0/0:15,0:15:11.35:0,11,215	0/0:13,0:13:17.95:0,18,159	0/0:18,0:18:35.98:0,36,324	1/1:19,3:22:15.89:377,16,0	1/1:5,21:26:70.27:710,70,0	1/1:8,8:16:41.53:420,42,0	1/1:2,4:6:18.02:190,18,0
chr10	110694860	.	T	TG	2227.63	PASS	AB=0.790;AC=29;AF=0.518;AN=56;BaseQRankSum=-3.227;DP=455;FS=37.798;HRun=10;HaplotypeScore=74.8732;InbreedingCoeff=0.0085;MQ=71.60;MQ0=0;MQRankSum=-0.883;QD=6.98;ReadPosRankSum=-0.993;VQSLOD=-0.6415;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:37:0.07:0,0,257	0/1:10,0:10:12.99:13,0,62	0/0:13,0:9:2.97:0,3,22	0/0:13,0:13:21.44:0,21,161	0/1:7,5:12:53.02:107,0,53	1/1:6,6:12:6.02:64,6,0	1/1:10,22:32:39.08:403,39,0	0/1:7,1:8:0:0,0,0	0/0:20,0:20:23.86:0,24,197	0/1:18,1:19:8.10:8,0,148	0/0:7,0:7:11.98:0,12,99	0/1:10,13:23:6.60:142,0,7	1/1:7,6:13:6.02:64,6,0	1/1:6,6:12:3:25,3,0	1/1:2,13:15:21.05:224,21,0	0/0:19,0:19:23.39:0,23,196	0/0:21,6:27:0.92:0,1,214	0/1:12,1:14:8.76:9,0,87	1/1:5,5:10:14.98:138,15,0	0/1:9,0:9:18.94:25,0,19	1/1:26,8:34:1.61:280,2,0	1/1:1,6:7:12.03:128,12,0	0/1:7,7:14:9.61:113,0,10	0/1:9,19:29:37.85:245,0,38	0/1:9,4:13:12.10:84,0,12	0/1:6,5:11:12.22:73,0,12	0/1:9,7:16:3.70:170,0,4	0/1:4,0:6:9.91:78,0,10
chr10	110697360	.	TC	T	364.26	PASS	AB=0.800;AC=6;AF=0.115;AN=52;BaseQRankSum=-1.870;DP=866;FS=4.044;HRun=3;HaplotypeScore=97.4097;InbreedingCoeff=-0.1339;MQ=32.11;MQ0=221;MQRankSum=-5.347;QD=1.99;ReadPosRankSum=0.606;VQSLOD=-0.3652;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,1:24:33.57:0,34,409	0/0:9,0:6:15.05:0,15,208	./.	./.	0/0:37,0:25:48.42:0,48,601	0/0:22,0:15:27.06:0,27,356	0/0:52,0:41:78.55:0,79,807	0/0:26,0:13:19.77:0,20,155	0/0:26,0:18:24.08:0,24,315	0/0:33,0:17:48.12:0,48,633	0/0:14,0:8:12.04:0,12,165	0/1:18,16:23:99:139,0,136	0/1:21,9:22:33.79:34,0,127	0/1:23,11:22:89.44:89,0,226	0/1:22,8:20:99:101,0,126	0/0:22,0:16:26.88:0,27,349	0/0:22,0:20:39.59:0,40,532	0/0:29,1:20:28.84:0,29,367	0/0:26,0:12:33.11:0,33,462	0/0:27,0:23:27.07:0,27,354	0/0:71,0:42:63.21:0,63,820	0/1:28,6:30:80.11:80,0,326	0/1:20,1:13:43.63:44,0,220	0/0:34,5:29:30.44:0,30,360	0/0:40,0:28:49.89:0,50,573	0/0:28,0:18:54.09:0,54,654	0/0:35,0:26:63.15:0,63,826	0/0:14,0:10:15.05:0,15,216
chr10	110701107	.	CCACCA	C	9173.99	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=18.232;DP=745;FS=7.878;HRun=0;HaplotypeScore=174.1969;InbreedingCoeff=0.9979;MQ=61.68;MQ0=3;MQRankSum=-18.131;QD=55.60;ReadPosRankSum=1.965;VQSLOD=4.9401;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,154,4675	0/0:9,0:9:27.07:0,27,721	0/0:17,0:13:33.11:0,33,934	0/0:14,0:11:33.09:0,33,833	0/0:22,0:22:63.22:0,63,1915	0/0:25,0:25:60.21:0,60,1857	0/0:35,0:35:93.32:0,93,2863	0/0:37,0:37:99:0,102,3062	0/0:27,0:27:78.27:0,78,2349	0/0:22,0:22:60.19:0,60,1731	0/0:18,0:18:54.19:0,54,1656	1/1:1,32:33:90.31:1887,90,0	1/1:2,29:31:84.29:1756,84,0	1/1:2,28:30:77.91:1635,78,0	1/1:3,26:29:84.22:1694,84,0	0/0:28,0:28:78.22:0,78,2254	0/0:45,0:45:99:0,132,3994	0/0:23,0:23:69.24:0,69,2117	0/0:18,0:18:54.19:0,54,1632	0/0:30,0:30:87.30:0,87,2654	0/0:73,0:73:99:0,208,6346	1/1:1,9:10:24.08:503,24,0	1/1:0,14:14:42.14:880,42,0	1/1:0,18:18:39.61:818,40,0	0/0:26,0:26:72.23:0,72,2153	0/0:26,0:26:63.22:0,63,1940	0/0:25,0:25:75.24:0,75,2208	0/0:6,0:6:18.04:0,18,489
chr10	110703975	.	A	AG	11793.66	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-16.956;DP=795;FS=4.928;HRun=2;HaplotypeScore=70.9052;InbreedingCoeff=0.9998;MQ=89.63;MQ0=0;MQRankSum=-0.935;QD=38.79;ReadPosRankSum=-0.938;VQSLOD=5.0241;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,162,1920	0/0:17,0:17:51.16:0,51,632	0/0:33,0:33:87.26:0,87,1063	0/0:27,0:27:71.91:0,72,826	1/1:0,26:26:69.16:962,69,0	1/1:1,22:23:63.21:907,63,0	1/1:1,32:33:90.30:1296,90,0	1/1:1,29:30:84.28:1208,84,0	0/0:22,0:22:63.19:0,63,761	0/0:22,0:22:63.20:0,63,781	0/0:13,0:13:39.11:0,39,471	0/0:50,0:50:99:0,147,1759	0/0:24,0:24:72.21:0,72,880	0/0:27,0:27:81.25:0,81,993	0/0:38,0:38:99:0,105,1301	0/0:26,0:26:78.25:0,78,967	0/0:36,0:36:99:0,108,1326	0/0:37,0:37:99:0,108,1290	1/1:2,19:21:54.16:746,54,0	1/1:0,19:19:57.08:772,57,0	1/1:2,56:57:99:2159,151,0	0/0:17,0:17:48.11:0,48,577	0/0:12,0:11:36.11:0,36,446	0/0:35,0:35:99:0,99,1195	1/1:2,35:37:99:1416,99,0	1/1:0,26:26:78.23:1096,78,0	1/1:0,21:22:60.17:843,60,0	1/1:0,9:9:27.09:389,27,0
chr10	110704874	.	ATG	A	1389.95	PASS	AB=0.966;AC=24;AF=0.429;AN=56;BaseQRankSum=9.707;DP=908;FS=0.463;HRun=0;HaplotypeScore=141.1762;InbreedingCoeff=0.6694;MQ=71.16;MQ0=9;MQRankSum=-0.322;QD=3.31;ReadPosRankSum=-1.806;VQSLOD=2.6266;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:44.26:0,44,1050	0/0:15,0:15:13.36:0,13,274	0/1:33,0:24:17.47:17,0,40	0/0:37,0:27:21.91:0,22,210	1/1:16,3:19:23.83:183,24,0	1/1:23,0:23:5.85:47,6,0	1/1:29,0:30:8.29:47,8,0	1/1:36,0:36:38.70:277,39,0	0/0:33,3:36:16.53:0,17,700	0/0:37,1:36:66.97:0,67,848	0/1:28,0:28:0.97:1,0,581	0/0:36,0:36:9:0,9,81	0/0:40,0:40:9.46:0,9,75	0/0:25,0:25:14.74:0,15,146	0/0:48,0:50:23.87:0,24,218	0/1:38,7:43:28.54:29,0,834	0/0:31,0:31:45.74:0,46,618	0/0:30,0:30:56.36:0,56,607	1/1:22,0:21:20.47:138,20,0	1/1:29,0:29:8.57:61,9,0	1/1:36,0:35:2.79:13,3,0	0/0:30,0:29:29.66:0,30,227	0/0:22,0:24:8.68:0,9,64	0/0:40,0:39:23.98:0,24,222	0/1:24,0:24:0:0,0,0	1/1:46,0:46:55.77:556,56,0	1/1:36,1:37:28.64:201,29,0	1/1:12,0:12:2.84:14,3,0
chr10	110704895	.	TGTGTGA	T	4739.64	PASS	AB=0.585;AC=19;AF=0.339;AN=56;BaseQRankSum=7.793;DP=895;FS=0.000;HRun=0;HaplotypeScore=166.9569;InbreedingCoeff=0.7713;MQ=58.27;MQ0=10;MQRankSum=0.474;QD=15.69;ReadPosRankSum=0.322;VQSLOD=4.1918;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:63:99:0,104,3092	0/0:13,0:13:33.05:0,33,714	0/0:14,0:6:15.80:0,16,171	0/0:18,0:8:23.44:0,23,408	1/1:16,3:19:39.38:583,39,0	1/1:2,22:25:8.96:138,9,0	1/1:4,27:32:8.61:100,9,0	1/1:9,29:37:61.61:852,62,0	0/0:38,0:38:92.88:0,93,1919	0/0:43,0:41:99:0,120,2432	0/0:34,0:34:54.48:0,54,1839	0/0:38,0:38:13.64:0,14,284	0/0:45,0:45:15.93:0,16,253	0/0:32,0:32:21.47:0,21,440	0/0:45,0:45:33.27:0,33,678	0/0:43,0:41:83.45:0,83,2349	0/0:30,0:30:53.20:0,53,1503	0/0:27,0:27:75.12:0,75,1593	0/1:7,6:12:7.43:355,0,7	1/1:1,20:21:8.93:178,9,0	0/1:6,30:35:6.41:6,0,14	0/0:28,0:27:47.73:0,48,824	0/0:28,0:28:11.07:0,11,234	0/0:53,0:52:36.94:0,37,766	0/1:2,19:21:0.03:0,0,0	1/1:3,41:44:66.90:1798,67,0	1/1:4,33:38:33:657,33,0	1/1:0,15:15:3.01:73,3,0
chr10	110704899	.	T	TGTGA	1560.88	PASS	AB=0.694;AC=10;AF=0.179;AN=56;BaseQRankSum=-2.243;DP=897;FS=0.550;HRun=0;HaplotypeScore=165.2043;InbreedingCoeff=0.2769;MQ=58.40;MQ0=11;MQRankSum=0.519;QD=5.27;ReadPosRankSum=1.059;VQSLOD=2.7999;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:61:99:0,107,1384	0/0:11,0:13:32.45:0,32,354	0/0:11,0:5:14.92:0,15,113	0/0:16,0:7:11.11:0,11,124	0/0:21,0:21:38.77:0,39,230	0/0:24,0:24:5.75:0,6,40	0/0:32,0:32:5.76:0,6,52	0/0:36,0:35:30.02:0,30,265	0/0:40,0:41:66.89:0,67,964	0/0:43,0:41:99:0,113,1203	0/0:35,0:36:93.28:0,93,1030	1/1:2,32:38:5.04:255,5,0	0/1:6,38:47:35.56:83,0,36	0/1:6,26:32:58.32:148,0,58	0/1:6,37:46:22.56:433,0,23	0/0:42,0:42:99:0,108,1334	0/0:27,0:28:50.44:0,50,777	0/0:29,0:29:33.49:0,33,791	0/0:12,0:11:6.03:0,6,104	0/0:21,0:21:8.66:0,9,90	0/0:34,0:33:5.99:0,6,49	0/1:28,0:27:0.61:296,0,1	1/1:4,23:28:8.77:148,9,0	0/1:9,39:54:90.43:335,0,90	0/1:22,0:22:0.02:0,0,0	0/0:44,0:44:99:0,99,659	0/0:38,0:38:32.04:0,32,287	0/0:15,0:15:3:0,3,28
chr10	110705690	.	CA	C	6656.53	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.246;DP=642;FS=1.399;HRun=8;HaplotypeScore=64.8904;InbreedingCoeff=0.9998;MQ=86.99;MQ0=0;MQRankSum=-5.488;QD=25.31;ReadPosRankSum=-0.393;VQSLOD=5.4074;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:63.17:0,63,740	0/0:14,0:14:42.13:0,42,507	0/0:22,0:22:40.18:0,40,492	0/0:21,0:22:40.90:0,41,561	1/1:4,25:29:69.10:666,69,0	1/1:1,24:25:69.11:666,69,0	1/1:0,22:22:63.10:608,63,0	1/1:4,18:22:54.08:522,54,0	0/0:26,0:26:69.20:0,69,824	0/0:24,0:24:63.19:0,63,761	0/0:22,0:22:60.16:0,60,696	0/0:25,0:25:72.21:0,72,859	0/0:20,0:20:57.17:0,57,689	0/0:23,0:23:63.19:0,63,761	0/0:16,0:16:30.09:0,30,362	0/0:21,0:21:57.17:0,57,689	0/0:29,0:29:75.23:0,75,906	0/0:25,0:25:66.20:0,66,797	1/1:1,22:23:62.93:580,63,0	1/1:0,23:23:66.10:637,66,0	1/1:1,24:25:69.11:666,69,0	0/0:24,0:24:63.19:0,63,761	0/0:26,0:26:66.19:0,66,787	0/0:15,0:15:42.13:0,42,507	1/1:0,13:13:30.05:290,30,0	1/1:2,25:27:41.88:688,42,0	1/1:4,30:34:84.13:811,84,0	1/1:0,20:20:54.09:521,54,0
chr10	110706887	.	AT	A	7181.60	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.616;DP=680;FS=0.940;HRun=8;HaplotypeScore=69.6787;InbreedingCoeff=0.9539;MQ=72.49;MQ0=0;MQRankSum=0.330;QD=25.02;ReadPosRankSum=-0.747;VQSLOD=5.2835;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.29:0,96,1160	0/0:20,0:20:60.18:0,60,725	0/0:17,0:16:6.05:0,6,192	0/0:10,0:10:1.46:0,1,192	1/1:3,33:36:96.14:925,96,0	1/1:4,34:38:99:985,102,0	1/1:1,18:19:48.07:464,48,0	1/1:6,35:41:99:996,105,0	0/0:24,0:24:66.19:0,66,785	0/0:35,0:35:93.28:0,93,1115	0/0:28,1:29:46.25:0,46,836	0/0:27,0:27:72.22:0,72,869	0/0:26,0:26:72.18:0,72,852	0/0:17,0:17:48.13:0,48,568	0/0:25,0:25:72.22:0,72,870	0/0:16,0:16:45.13:0,45,533	0/0:22,0:22:63.19:0,63,761	0/0:19,0:19:54.17:0,54,652	1/1:1,15:16:45.06:430,45,0	1/1:3,39:42:99:1101,114,0	1/1:2,11:13:30.05:290,30,0	0/0:33,0:33:90.14:0,90,1066	0/0:23,0:23:66.20:0,66,797	0/0:17,0:17:51.16:0,51,616	1/1:3,17:20:48.08:464,48,0	1/1:2,21:23:29.87:572,30,0	1/1:4,25:29:75.12:724,75,0	1/1:2,8:10:24.04:232,24,0
chr10	110708141	.	C	CA	10941.47	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-17.522;DP=753;FS=6.258;HRun=2;HaplotypeScore=68.0867;InbreedingCoeff=0.9953;MQ=85.06;MQ0=0;MQRankSum=-2.119;QD=37.34;ReadPosRankSum=-0.366;VQSLOD=5.1525;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,147,1821	0/0:9,0:9:24.07:0,24,297	0/0:26,0:26:68.52:0,69,783	0/0:23,0:22:54.03:0,54,599	1/1:0,15:15:45.15:647,45,0	1/1:1,29:30:75.25:1080,75,0	1/1:2,23:25:63.21:907,63,0	1/1:3,36:39:99:1496,108,0	0/0:31,0:31:87.27:0,87,1073	0/0:31,0:31:93.29:0,93,1144	0/0:18,0:18:51.16:0,51,632	0/0:25,0:25:72.23:0,72,892	0/0:38,0:38:99:0,111,1350	0/0:24,0:24:72.21:0,72,877	0/0:29,0:29:84.24:0,84,1018	0/0:26,0:26:60.14:0,60,744	0/0:28,0:28:84.25:0,84,1028	0/0:24,0:24:72.23:0,72,892	1/1:0,13:13:39.13:561,39,0	1/1:1,31:32:87.11:1179,87,0	1/1:2,42:44:99:1511,105,0	0/0:22,0:21:63.19:0,63,768	0/0:23,0:23:63.18:0,63,764	0/0:30,0:30:87.26:0,87,1065	1/1:1,25:25:69.23:993,69,0	1/1:2,25:27:75.20:1021,75,0	1/1:2,34:36:96.32:1374,96,0	1/1:0,6:6:12.04:173,12,0
chr10	110709787	.	ACTGT	A	10268.38	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.478;DP=630;FS=65.009;HRun=0;HaplotypeScore=112.3142;InbreedingCoeff=0.9974;MQ=80.40;MQ0=0;MQRankSum=-2.543;QD=44.45;ReadPosRankSum=2.158;VQSLOD=2.8307;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,147,3969	0/0:9,0:9:27.09:0,27,688	0/0:17,0:17:45.05:0,45,1121	0/0:20,0:20:54.15:0,54,1290	1/1:0,21:21:42.42:839,42,0	1/1:0,19:19:36.12:718,36,0	1/1:0,19:19:48.16:958,48,0	1/1:1,15:16:42.12:768,42,0	0/0:16,0:16:48.15:0,48,1211	0/0:22,0:22:66.22:0,66,1677	0/0:15,0:15:42.14:0,42,1093	0/0:31,0:31:87.30:0,87,2396	0/0:26,0:26:78.25:0,78,2078	0/0:38,0:38:99:0,114,3006	0/0:23,0:23:69.24:0,69,1842	0/0:20,0:20:60.21:0,60,1610	0/0:32,0:32:96.33:0,96,2674	0/0:21,0:21:60.21:0,60,1679	1/1:0,25:25:75.25:1399,75,0	1/1:0,21:21:47.71:910,48,0	1/1:3,33:36:66.20:1295,66,0	0/0:19,0:19:54.19:0,54,1414	0/0:20,0:20:60.21:0,60,1644	0/0:21,0:21:60.21:0,60,1668	1/1:0,21:21:41.69:839,42,0	1/1:1,25:26:72.25:1404,72,0	1/1:0,19:19:42.14:838,42,0	1/1:0,8:8:14.78:299,15,0
chr10	110710442	.	GA	G	7335.94	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=8.585;DP=643;FS=2.374;HRun=11;HaplotypeScore=74.6339;InbreedingCoeff=0.9349;MQ=71.41;MQ0=0;MQRankSum=-2.267;QD=18.11;ReadPosRankSum=2.442;VQSLOD=6.0415;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:28:53.56:0,54,774	0/0:12,0:13:26.90:0,27,270	0/0:25,0:22:22.74:0,23,293	0/0:14,1:11:16.93:0,17,140	1/1:9,20:29:34.78:425,35,0	1/1:2,11:14:34.99:277,35,0	1/1:4,20:25:55.97:449,56,0	1/1:2,22:24:62.86:509,63,0	0/0:22,0:22:57.13:0,57,600	0/0:21,1:22:29.50:0,30,515	0/0:23,0:23:45.09:0,45,460	1/1:2,11:13:4.80:175,5,0	1/1:2,16:19:49.97:400,50,0	1/1:3,20:23:50.94:419,51,0	1/1:2,25:27:68.91:566,69,0	0/0:33,2:35:49.88:0,50,914	0/0:24,2:26:16.92:0,17,564	0/0:28,0:29:71.27:0,71,772	1/1:7,15:22:15.91:331,16,0	1/1:5,27:32:71.86:590,72,0	1/1:1,14:15:32.96:271,33,0	1/1:1,15:17:34.97:277,35,0	1/1:6,22:28:62.91:517,63,0	1/1:2,24:26:4.96:453,5,0	1/1:5,21:27:26.97:417,27,0	1/1:1,26:27:77.78:631,78,0	1/1:2,26:28:65.91:542,66,0	1/1:3,6:9:4.04:88,4,0
chr10	110711462	.	GGTGTGT	G	149.23	PASS	AB=0.925;AC=13;AF=0.260;AN=50;BaseQRankSum=3.587;DP=563;FS=1.334;HRun=0;HaplotypeScore=115.1355;InbreedingCoeff=0.4471;MQ=64.27;MQ0=19;MQRankSum=-0.953;QD=0.82;ReadPosRankSum=-0.247;VQSLOD=2.3670;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:29.14:0,29,438	0/0:7,0:7:3.01:0,3,96	./.	./.	0/1:20,0:23:0.07:1,0,0	0/1:14,0:12:11.23:22,0,11	0/1:21,3:23:5.92:54,0,6	0/0:25,0:24:0:0,0,0	0/0:9,0:9:12.01:0,12,178	0/0:21,0:20:15.05:0,15,385	0/0:12,0:12:15.04:0,15,402	0/0:22,0:21:17.91:0,18,173	0/0:18,0:19:17.98:0,18,180	0/0:16,0:16:5.55:0,6,46	0/0:27,0:30:17.93:0,18,151	0/0:18,0:17:17.98:0,18,245	0/0:24,0:26:29.16:0,29,670	0/0:16,0:13:2.98:0,3,22	1/1:17,0:17:2.92:17,3,0	1/1:17,0:16:5.23:58,5,0	1/1:46,0:46:1.23:3,1,0	0/0:9,0:9:3.01:0,3,49	0/0:11,0:12:5.92:0,6,42	0/0:25,0:27:35.17:0,35,432	1/1:16,3:20:5.97:62,6,0	0/0:12,0:12:0:0,0,0	1/1:18,3:20:2.74:60,3,0	./.
chr10	110711972	.	AAT	A	1203.42	PASS	AB=0.922;AC=25;AF=0.521;AN=48;BaseQRankSum=6.264;DP=198;FS=0.000;HRun=0;HaplotypeScore=46.6530;InbreedingCoeff=0.5082;MQ=77.13;MQ0=1;MQRankSum=-6.042;QD=10.11;ReadPosRankSum=-0.215;VQSLOD=3.0186;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:21.05:0,21,305	0/0:1,0:1:3.01:0,3,47	0/0:4,0:4:3:0,3,28	0/0:8,0:7:3.48:0,3,37	1/1:6,0:6:5.80:55,6,0	1/1:5,1:6:15.02:149,15,0	1/1:3,0:3:5.96:47,6,0	1/1:33,0:33:44.62:365,45,0	0/0:2,0:2:3.01:0,3,47	0/0:9,0:9:9:0,9,115	0/0:8,0:8:11.96:0,12,116	0/0:0,0:5:3:0,3,26	./.	0/1:3,0:3:0:0,0,0	0/0:8,0:8:3:0,3,25	0/1:4,1:5:26.53:27,0,63	0/1:13,1:13:11.52:12,0,227	0/0:15,1:16:9.57:0,10,555	1/1:12,0:12:20.94:176,21,0	1/1:2,0:2:3.01:35,3,0	1/1:3,0:3:3.01:32,3,0	./.	./.	./.	1/1:6,1:7:11.96:106,12,0	1/1:6,0:6:8.96:73,9,0	1/1:10,0:10:20.95:180,21,0	1/1:8,1:9:14.29:109,14,0
chr10	110711990	.	TATAC	T	2773.37	PASS	AC=22;AF=0.407;AN=54;BaseQRankSum=8.006;DP=196;FS=14.259;HRun=0;HaplotypeScore=51.2557;InbreedingCoeff=0.7644;MQ=70.24;MQ0=1;MQRankSum=-6.877;QD=29.82;ReadPosRankSum=1.480;VQSLOD=1.6638;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:33.04:0,33,642	0/0:4,0:4:11.99:0,12,156	0/0:7,0:4:3.79:0,4,18	0/0:10,0:6:2.13:0,2,53	1/1:6,2:8:13.98:153,14,0	1/1:6,4:10:20.99:290,21,0	1/1:0,2:2:6.02:101,6,0	1/1:19,12:30:80.87:993,81,0	0/0:6,0:6:18:0,18,220	0/0:7,0:7:21.04:0,21,349	0/0:4,0:4:12.04:0,12,272	0/0:4,0:4:9:0,9,105	./.	0/0:2,0:2:2.89:0,3,23	0/0:6,0:6:9:0,9,121	0/0:5,0:5:14.97:0,15,224	0/0:11,0:11:32.99:0,33,609	0/0:20,0:20:60.05:0,60,1221	1/1:5,5:10:26.99:385,27,0	1/1:3,0:3:3.01:35,3,0	1/1:1,1:2:2.80:49,3,0	0/0:3,0:3:8.98:0,9,72	0/0:2,0:2:5.99:0,6,48	0/0:1,0:1:2.99:0,3,24	1/1:3,3:6:12.04:209,12,0	1/1:6,3:9:15.02:206,15,0	1/1:2,5:7:21.05:333,21,0	1/1:2,3:5:14.54:215,15,0
chr10	110711998	.	TAC	T	2827.88	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=9.771;DP=232;FS=19.814;HRun=0;HaplotypeScore=50.1659;InbreedingCoeff=0.7932;MQ=72.70;MQ0=0;MQRankSum=-6.953;QD=23.57;ReadPosRankSum=0.009;VQSLOD=2.0891;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:30.09:0,30,544	0/0:5,0:5:15.05:0,15,278	1/1:10,0:5:5.56:33,6,0	0/0:13,1:8:10.63:0,11,64	1/1:0,9:9:11.74:120,12,0	1/1:1,10:11:19.24:234,19,0	1/1:0,2:2:6.02:78,6,0	1/1:5,32:35:99:1291,105,0	0/0:8,0:8:24.07:0,24,428	0/0:10,0:10:30.10:0,30,539	0/0:4,1:5:11.98:0,12,196	0/0:4,0:4:9.03:0,9,148	0/0:3,0:3:9.03:0,9,153	0/1:4,0:4:5.61:6,0,106	0/0:5,0:5:12.04:0,12,221	0/0:8,0:8:24.08:0,24,413	0/0:10,0:10:30.10:0,30,558	0/0:21,0:21:63.12:0,63,1061	1/1:0,8:8:24.06:327,24,0	1/1:0,4:4:5.99:50,6,0	1/1:0,3:3:2.92:17,3,0	0/0:5,0:5:15.05:0,15,279	0/0:3,0:3:9.03:0,9,164	0/0:1,0:1:3.01:0,3,58	1/1:2,5:7:11.96:123,12,0	1/1:1,10:11:26.96:318,27,0	1/1:1,7:8:20.99:250,21,0	1/1:1,4:5:15.04:190,15,0
chr10	110712820	.	CA	C	11457.77	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.705;DP=731;FS=4.930;HRun=2;HaplotypeScore=69.2564;InbreedingCoeff=0.9996;MQ=87.39;MQ0=0;MQRankSum=-4.497;QD=35.69;ReadPosRankSum=-0.972;VQSLOD=4.9814;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.21:0,90,1279	0/0:14,0:14:42.14:0,42,627	0/0:28,0:28:78.21:0,78,1078	0/0:25,0:24:69.23:0,69,1004	1/1:0,29:29:78.25:1010,78,0	1/1:0,33:33:96.31:1246,96,0	1/1:1,20:21:60.19:779,60,0	1/1:2,30:32:90.29:1166,90,0	0/0:22,0:22:66.22:0,66,989	0/0:24,0:24:72.24:0,72,1080	0/0:26,0:26:78.26:0,78,1169	0/0:27,0:27:81.27:0,81,1214	0/0:21,0:21:60.19:0,60,880	0/0:27,0:27:78.25:0,78,1147	0/0:38,0:38:99:0,114,1705	0/0:17,0:17:51.17:0,51,765	0/0:24,0:24:69.18:0,69,972	0/0:9,0:9:27.09:0,27,405	1/1:0,23:23:69.21:880,69,0	1/1:0,34:34:87.28:1130,87,0	1/1:0,38:38:99:1363,105,0	0/0:24,0:24:72.24:0,72,1078	0/0:34,0:34:96.31:0,96,1419	0/0:20,0:20:60.20:0,60,899	1/1:0,17:17:51.17:662,51,0	1/1:3,36:39:24.36:1275,24,0	1/1:0,31:31:90.29:1168,90,0	1/1:1,23:24:60.20:779,60,0
chr10	110713053	.	CTG	C	10656.76	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=13.854;DP=680;FS=30.754;HRun=0;HaplotypeScore=80.4180;InbreedingCoeff=0.9998;MQ=85.24;MQ0=3;MQRankSum=-3.533;QD=39.76;ReadPosRankSum=1.130;VQSLOD=3.5698;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,2069	0/0:11,0:10:30.10:0,30,557	0/0:25,0:25:75.24:0,75,1362	0/0:19,0:19:54.08:0,54,848	1/1:0,24:24:57.19:839,57,0	1/1:0,21:20:60.20:884,60,0	1/1:1,25:26:66.22:972,66,0	1/1:1,22:24:69.21:978,69,0	0/0:18,0:18:54.17:0,54,973	0/0:24,0:24:72.24:0,72,1308	0/0:18,0:18:51.17:0,51,954	0/0:23,0:23:66.21:0,66,1181	0/0:26,0:26:75.26:0,75,1400	0/0:29,0:29:81.26:0,81,1461	0/0:25,0:24:75.26:0,75,1388	0/0:33,0:33:99:0,99,1816	0/0:31,0:31:84.26:0,84,1502	0/0:16,0:16:45.14:0,45,802	1/1:1,16:17:45.15:660,45,0	1/1:0,21:20:57.19:839,57,0	1/1:9,45:53:99:2196,156,0	0/0:26,0:26:75.26:0,75,1390	0/0:25,0:25:69.24:0,69,1290	0/0:24,0:24:69.24:0,69,1292	1/1:0,19:18:51.17:751,51,0	1/1:0,29:30:90.28:1304,90,0	1/1:1,20:21:54.18:793,54,0	1/1:0,11:11:30.10:442,30,0
chr10	110713406	.	TG	T	7683.20	PASS	AB=0.809;AC=24;AF=0.429;AN=56;BaseQRankSum=6.337;DP=1625;DS;FS=40.933;HRun=1;HaplotypeScore=161.0674;InbreedingCoeff=-0.7785;MQ=41.59;MQ0=242;MQRankSum=0.579;QD=5.14;ReadPosRankSum=2.293;VQSLOD=-0.5068;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:39,23:42:99:392,0,912	0/1:15,3:9:23.90:24,0,221	0/0:32,3:2:6.02:0,6,91	0/0:36,4:2:3.01:0,3,48	0/1:27,6:20:55.43:55,0,174	0/1:37,4:24:54.06:54,0,578	0/1:80,15:73:99:170,0,2252	0/1:28,3:12:14.85:15,0,354	0/1:62,23:64:99:395,0,1466	0/1:41,16:36:99:356,0,968	0/1:15,5:13:97.74:98,0,212	0/1:60,22:61:99:567,0,1092	0/1:54,18:51:99:341,0,1183	0/1:69,26:79:99:712,0,1726	0/1:55,31:61:99:674,0,1140	0/1:68,27:76:99:778,0,1372	0/1:55,14:55:99:403,0,1212	0/1:29,14:33:99:448,0,605	0/1:29,5:9:99:102,0,216	0/0:19,2:8:18.06:0,18,287	0/1:151,58:152:99:1151,0,3062	0/0:26,9:23:32.99:0,33,467	0/1:13,12:17:99:102,0,215	0/1:68,16:64:99:351,0,1450	0/1:36,11:28:99:167,0,345	0/1:64,10:41:99:129,0,1499	0/1:23,7:22:99:166,0,359	0/1:5,2:3:32.85:33,0,87
chr10	110715794	.	A	AT	7700.05	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-16.544;DP=616;FS=5.310;HRun=9;HaplotypeScore=56.8629;InbreedingCoeff=0.9815;MQ=70.00;MQ0=0;MQRankSum=-1.008;QD=26.74;ReadPosRankSum=-2.037;VQSLOD=4.7112;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:65.96:0,66,572	0/0:9,0:9:26.99:0,27,234	0/0:9,0:9:20.99:0,21,182	0/0:6,0:6:5.98:0,6,52	1/1:2,28:30:81.18:882,81,0	1/1:4,22:26:40.20:671,40,0	1/1:4,23:27:46.14:737,46,0	1/1:6,40:46:91.23:1218,91,0	0/0:14,0:14:29.99:0,30,260	0/0:28,0:28:56.95:0,57,490	0/0:21,0:21:56.98:0,57,495	0/0:22,0:22:62.99:0,63,547	0/0:26,0:26:71.96:0,72,621	0/0:17,0:18:53.01:0,53,445	0/0:20,1:22:23.79:0,24,436	0/0:26,0:26:65.98:0,66,572	0/0:24,0:24:71.99:0,72,625	0/0:17,0:17:50.95:0,51,436	1/1:3,14:17:36.10:398,36,0	1/1:4,29:33:61.14:890,61,0	1/1:1,12:14:30.08:332,30,0	0/0:20,1:21:17.80:0,18,383	0/0:22,0:23:68.02:0,68,579	0/0:15,0:15:41.98:0,42,364	1/1:2,15:18:18.52:466,19,0	1/1:4,20:24:63.15:679,63,0	1/1:2,33:35:90.24:996,90,0	1/1:4,14:18:39.11:431,39,0
chr10	110717889	.	CA	C	14022.47	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=4.298;DP=697;FS=3.971;HRun=4;HaplotypeScore=106.4959;InbreedingCoeff=1.0000;MQ=85.22;MQ0=0;MQRankSum=-6.171;QD=31.37;ReadPosRankSum=1.285;VQSLOD=4.6973;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,1674	0/0:13,0:13:36.11:0,36,476	0/0:25,0:25:59.10:0,59,708	0/0:28,0:27:70.80:0,71,821	1/1:5,23:28:66.17:761,66,0	1/1:4,19:23:63.11:722,63,0	1/1:4,20:24:72.13:812,72,0	1/1:1,27:28:81.20:927,81,0	0/0:18,0:18:48.14:0,48,626	0/0:31,0:31:84.24:0,84,1070	0/0:17,0:17:48.12:0,48,608	1/1:5,25:30:84.23:981,84,0	1/1:1,15:16:48.09:557,48,0	1/1:5,21:26:72.14:821,72,0	1/1:3,19:22:60.17:705,60,0	0/0:21,0:21:60.18:0,60,790	0/0:23,0:23:63.20:0,63,844	0/0:29,0:29:72.20:0,72,948	1/1:2,19:21:60.16:696,60,0	1/1:9,15:24:66.10:697,66,0	1/1:4,20:24:63.06:716,63,0	1/1:7,23:30:81.12:893,81,0	1/1:2,21:23:60.15:694,60,0	1/1:1,19:20:60.10:686,60,0	1/1:3,27:30:72.54:911,73,0	1/1:5,33:38:70.28:1222,70,0	1/1:9,19:28:72.11:809,72,0	1/1:1,11:12:36.04:413,36,0
chr10	110718468	.	GA	G	6857.76	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.479;DP=727;FS=0.000;HRun=10;HaplotypeScore=87.3216;InbreedingCoeff=0.9687;MQ=73.89;MQ0=0;MQRankSum=-0.417;QD=22.19;ReadPosRankSum=0.421;VQSLOD=5.2626;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:93.15:0,93,993	0/0:10,0:10:27.07:0,27,297	0/0:15,0:16:26.90:0,27,266	0/0:12,0:12:1.47:0,1,106	1/1:2,32:35:91.80:787,92,0	1/1:3,26:29:77.98:677,78,0	1/1:2,17:19:44.99:391,45,0	1/1:7,19:27:59:497,59,0	0/0:20,0:20:51.14:0,51,564	0/0:35,1:36:70.17:0,70,990	0/0:27,1:28:43.13:0,43,704	0/0:20,0:20:51.14:0,51,564	0/0:31,0:31:72.15:0,72,772	0/0:20,0:20:54.13:0,54,589	0/0:31,2:34:34.17:0,34,855	0/0:30,0:30:81.20:0,81,880	0/0:31,0:31:84.23:0,84,929	0/0:21,0:21:57.15:0,57,630	1/1:1,26:28:79.97:673,80,0	1/1:4,27:31:74.96:651,75,0	1/1:2,23:25:68.98:599,69,0	0/0:24,0:24:54.15:0,54,597	0/0:28,0:28:75.19:0,75,815	0/0:21,0:21:54.15:0,54,597	1/1:1,24:25:71.98:625,72,0	1/1:3,30:34:89.02:761,89,0	1/1:4,37:42:76.74:884,77,0	1/1:0,14:14:35.99:313,36,0
chr10_random	512	.	TC	T	400.65	PASS	AB=0.545;AC=5;AF=0.100;AN=50;BaseQRankSum=3.323;DP=507;FS=9.559;HRun=1;HaplotypeScore=26.8030;InbreedingCoeff=0.4625;MQ=27.33;MQ0=219;MQRankSum=-4.014;QD=4.95;ReadPosRankSum=-0.447;VQSLOD=-0.5906;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	0/0:18,0:8:12.04:0,12,191	0/0:6,0:6:6.02:0,6,96	./.	./.	0/0:28,0:21:21.07:0,21,329	0/0:19,0:11:18.06:0,18,286	0/0:19,0:13:24.08:0,24,369	1/1:2,26:3:9:93,9,0	0/0:12,0:6:6.02:0,6,95	0/0:17,0:10:30.08:0,30,454	0/0:18,0:12:9.03:0,9,142	0/0:13,0:10:9.03:0,9,144	0/0:21,0:15:21.07:0,21,333	0/0:23,0:22:26.78:0,27,429	0/0:22,0:16:30.09:0,30,455	0/0:21,0:13:17.57:0,18,274	0/0:16,0:9:12.04:0,12,191	0/0:13,0:5:6.02:0,6,96	0/0:25,0:15:45.15:0,45,717	0/0:15,0:9:6.02:0,6,96	0/0:17,0:12:9.03:0,9,143	0/0:15,0:10:3.01:0,3,48	0/0:17,0:8:3.01:0,3,48	0/0:12,0:10:15.05:0,15,239	0/0:12,0:8:12.04:0,12,191	0/1:4,20:8:71.82:222,0,72	1/1:6,23:7:15.05:202,15,0	./.
chr10_random	1684	.	G	GTT	730	PASS	AB=1.000;AC=3;AF=0.058;AN=52;BaseQRankSum=3.273;DP=530;FS=0.709;HRun=10;HaplotypeScore=65.9677;InbreedingCoeff=0.4755;MQ=44.38;MQ0=49;MQRankSum=-3.009;QD=14.31;ReadPosRankSum=-1.201;VQSLOD=1.4257;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	1/1:4,24:40:75.61:809,76,0	0/0:14,0:14:39.09:0,39,396	0/0:10,0:7:14.61:0,15,119	0/1:9,0:6:25.36:25,0,43	0/0:23,0:20:39.27:0,39,444	0/0:28,0:25:57.08:0,57,576	0/0:15,0:13:36.06:0,36,365	0/0:3,0:1:3.01:0,3,31	0/0:12,0:12:36.08:0,36,365	0/0:24,0:19:48.10:0,48,488	0/0:24,0:23:54.10:0,54,547	0/0:17,0:17:35.71:0,36,388	0/0:18,0:18:39.06:0,39,396	0/0:25,0:23:60.06:0,60,607	0/0:18,0:16:42.10:0,42,427	0/0:21,0:20:50.86:0,51,518	./.	0/0:17,0:17:48.10:0,48,488	0/0:16,0:13:36.05:0,36,356	0/0:42,0:36:89.89:0,90,896	0/0:21,0:19:54.12:0,54,545	0/0:22,0:21:50.58:0,51,551	0/0:25,0:26:60.60:0,61,607	0/0:22,0:22:54.06:0,54,539	0/0:25,0:25:59.74:0,60,588	0/0:6,0:2:6.01:0,6,61	./.	0/0:1,0:1:2.97:0,3,20
chr10_random	5588	.	CATAT	C	14174.76	PASS	AB=0.691;AC=11;AF=0.196;AN=56;BaseQRankSum=4.654;DP=1174;FS=0.261;HRun=0;HaplotypeScore=233.8364;InbreedingCoeff=0.6597;MQ=60.14;MQ0=5;MQRankSum=-3.519;QD=26.59;ReadPosRankSum=-1.135;VQSLOD=4.1774;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	0/1:12,9:27:41.35:414,0,41	0/0:12,0:13:21.07:0,21,503	0/0:24,0:14:3.83:0,4,68	0/0:32,0:14:8.29:0,8,129	0/0:33,0:42:77.46:0,77,1749	0/0:21,0:52:97:0,97,1795	0/0:13,0:21:33.11:0,33,694	1/1:59,122:181:99:5611,360,0	0/0:29,0:37:89.86:0,90,1859	0/0:39,0:54:99:0,116,2367	0/0:33,0:42:87.07:0,87,1839	0/0:15,0:22:53.95:0,54,882	0/0:32,1:39:15.64:0,16,1571	0/0:16,0:22:44.90:0,45,844	0/0:29,0:31:66.90:0,67,1521	0/0:28,0:30:56.64:0,57,1154	1/1:17,14:37:33.57:674,34,0	0/0:15,0:20:50.96:0,51,1133	0/0:47,0:49:93.78:0,94,2404	0/0:31,0:37:81.05:0,81,1831	0/0:12,0:16:32.90:0,33,690	0/0:12,0:14:17.85:0,18,387	0/0:26,1:29:4.12:0,4,1035	0/0:12,0:13:26.88:0,27,544	0/1:34,3:57:16.35:16,0,2232	0/1:20,59:84:0.31:2409,0,0	1/1:20,83:105:99:3580,213,0	1/1:6,30:37:77.57:1470,78,0
chr10_random	8568	.	TAC	T	2141.36	PASS	AB=0.760;AC=7;AF=0.135;AN=52;BaseQRankSum=8.760;DP=1205;FS=19.355;HRun=0;HaplotypeScore=153.6916;InbreedingCoeff=0.4141;MQ=34.31;MQ0=362;MQRankSum=-5.062;QD=11.77;ReadPosRankSum=-0.417;VQSLOD=1.6495;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	0/0:31,0:37:92.68:0,93,794	0/0:22,1:16:9.61:0,10,600	0/0:38,0:1:0.89:0,1,2	./.	0/0:50,0:32:57.67:0,58,890	0/1:29,2:20:28.94:29,0,512	0/0:39,1:24:18.65:0,19,755	./.	0/0:45,1:34:36.70:0,37,1026	0/0:41,0:29:84.20:0,84,1224	0/0:33,0:21:36.12:0,36,565	0/0:42,0:23:57.15:0,57,866	0/0:36,0:27:45.13:0,45,658	0/0:39,0:25:60.18:0,60,896	0/0:48,0:29:54.18:0,54,821	0/0:49,0:35:87.76:0,88,1322	1/1:10,36:41:41.24:1108,41,0	0/0:40,0:34:60.15:0,60,881	0/0:28,1:16:12.59:0,13,633	0/0:51,0:39:87.29:0,87,1327	0/0:69,1:54:96.87:0,97,1948	0/0:50,1:36:45.76:0,46,1176	0/0:48,1:37:39.73:0,40,1082	0/0:69,0:58:99:0,123,1910	0/0:36,1:36:36.69:0,37,1033	0/1:30,11:24:55.90:460,0,56	0/1:13,15:30:42.53:565,0,43	1/1:8,5:13:2.79:110,3,0
chr10_random	8587	.	A	ACG	1003.73	PASS	AB=0.948;AC=5;AF=0.096;AN=52;BaseQRankSum=5.650;DP=1159;FS=12.381;HRun=0;HaplotypeScore=169.6470;InbreedingCoeff=0.3469;MQ=37.57;MQ0=159;MQRankSum=-2.565;QD=7.84;ReadPosRankSum=2.618;VQSLOD=2.4603;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	1/1:29,10:36:25.69:1045,26,0	0/0:21,0:18:48.08:0,48,665	0/0:37,0:2:1.55:0,2,4	./.	0/0:50,0:41:66.18:0,66,935	0/0:30,0:27:48.07:0,48,630	0/0:39,0:34:60.11:0,60,833	./.	0/0:41,0:37:72.19:0,72,1044	0/0:47,0:40:99:0,120,1445	0/0:36,0:31:47.71:0,48,643	0/0:38,0:28:57.14:0,57,833	0/0:34,0:28:54.10:0,54,737	0/0:33,0:30:66.14:0,66,908	0/0:45,0:39:66.17:0,66,900	0/0:46,0:42:90.76:0,91,1334	0/0:38,1:37:49.69:0,50,685	0/0:39,0:34:53.85:0,54,938	0/0:34,0:18:51.13:0,51,714	0/0:58,0:50:90.29:0,90,1326	0/0:81,0:69:99:0,156,2130	0/0:52,0:42:81.24:0,81,1185	0/0:54,0:47:81.13:0,81,1141	0/0:76,0:67:99:0,141,2005	0/0:44,0:40:64.98:0,65,1123	0/1:34,2:27:36.73:37,0,461	0/1:31,2:30:11.05:11,0,478	0/1:19,1:15:30.82:31,0,133
chr10_random	8719	.	ACC	A	837.32	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=5.120;DP=1218;FS=2.676;HRun=2;HaplotypeScore=121.2688;InbreedingCoeff=0.7451;MQ=31.61;MQ0=629;MQRankSum=-0.538;QD=7.10;ReadPosRankSum=2.106;VQSLOD=0.6924;culprit=QD;set=inputR	GT:AD:DP:GQ:PL	0/1:27,0:11:17.90:18,0,62	0/0:11,0:7:18.01:0,18,280	0/0:59,0:8:7.51:0,8,52	0/0:75,1:12:20.68:0,21,172	0/0:41,0:19:30.10:0,30,567	0/0:39,0:14:39.11:0,39,682	0/0:46,0:19:32.95:0,33,480	./.	0/0:59,0:29:48.08:0,48,892	0/0:52,0:27:81.21:0,81,1458	0/0:37,0:19:45.10:0,45,767	0/0:55,0:24:41.09:0,41,645	0/0:46,0:22:32.23:0,32,463	0/0:47,0:24:32.81:0,33,588	0/0:67,0:26:24.08:0,24,456	0/0:48,0:21:31.65:0,32,598	0/0:15,0:6:2.98:0,3,21	0/0:28,0:17:37.55:0,38,479	0/0:34,0:9:27.04:0,27,471	0/0:24,0:10:21.07:0,21,355	0/0:98,0:40:71.74:0,72,1180	0/0:47,0:20:48.16:0,48,917	0/0:46,0:19:42.13:0,42,761	0/0:71,0:41:68.55:0,69,976	0/0:40,0:22:66.11:0,66,1164	1/1:29,18:25:27.11:611,27,0	1/1:6,29:18:22.44:220,22,0	1/1:1,6:6:9.03:130,9,0
chr10_random	8720	.	CCA	C	832.85	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=5.540;DP=1207;FS=2.675;HRun=0;HaplotypeScore=121.1837;InbreedingCoeff=0.7108;MQ=31.81;MQ0=619;MQRankSum=-1.185;QD=7.18;ReadPosRankSum=1.801;VQSLOD=3.2882;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	0/1:27,0:11:31.94:32,0,84	0/0:11,0:7:18.06:0,18,336	0/0:57,1:8:6.75:0,7,50	0/0:70,4:12:20.79:0,21,216	0/0:42,0:20:30.10:0,30,606	0/0:39,0:14:39.13:0,39,744	0/0:46,0:19:36.08:0,36,601	./.	0/0:57,0:28:48.16:0,48,911	0/0:52,0:27:81.28:0,81,1490	0/0:37,0:19:45.15:0,45,864	0/0:55,0:24:41.99:0,42,744	0/0:45,0:22:33.03:0,33,551	0/0:44,0:25:36.04:0,36,676	0/0:67,0:26:24.08:0,24,484	0/0:48,0:20:33.09:0,33,675	0/0:15,0:6:2.94:0,3,18	0/0:28,0:17:38.34:0,38,598	0/0:34,0:10:30.10:0,30,553	0/0:24,0:10:21.03:0,21,361	0/0:98,0:41:72.07:0,72,1307	0/0:46,0:20:48.16:0,48,923	0/0:46,0:19:42.14:0,42,826	0/0:70,0:40:69.16:0,69,1183	0/0:41,0:22:66.22:0,66,1204	1/1:25,22:25:7.26:596,7,0	1/1:35,0:16:21.03:210,21,0	1/1:7,0:6:9.03:130,9,0
chr10_random	9267	.	TG	T	1539.63	PASS	AB=0.658;AC=1;AF=0.018;AN=56;BaseQRankSum=4.187;DP=1402;FS=0.000;HRun=1;HaplotypeScore=146.5761;InbreedingCoeff=-0.0182;MQ=58.65;MQ0=9;MQRankSum=0.129;QD=16.04;ReadPosRankSum=0.600;VQSLOD=3.6741;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	0/1:46,50:96:99:1614,0,1877	0/0:20,0:20:57.18:0,57,888	0/0:52,0:36:99:0,105,1569	0/0:44,0:32:81.20:0,81,1218	0/0:58,0:58:99:0,163,2572	0/0:41,0:41:99:0,120,1917	0/0:48,0:48:99:0,144,2274	0/0:74,0:73:99:0,214,3023	0/0:31,0:31:87.30:0,87,1380	0/0:47,0:47:99:0,138,2183	0/0:50,0:49:99:0,135,2107	0/0:46,0:46:99:0,138,2177	0/0:49,0:49:99:0,144,2290	0/0:45,0:45:99:0,132,2070	0/0:49,0:49:99:0,147,2294	0/0:44,0:44:99:0,132,2058	0/0:68,0:68:99:0,199,3160	0/0:37,0:37:99:0,111,1770	0/0:35,0:33:99:0,99,1582	0/0:51,0:51:99:0,154,2422	0/0:71,0:71:99:0,208,3256	0/0:53,0:53:99:0,154,2407	0/0:54,0:54:99:0,157,2450	0/0:49,0:49:99:0,144,2259	0/0:42,0:42:99:0,123,1899	0/0:67,0:67:99:0,199,3053	0/0:72,0:71:99:0,214,3148	0/0:9,0:9:27.09:0,27,414
chr10_random	9382	.	GT	G	1443.07	PASS	AB=0.667;AC=1;AF=0.018;AN=56;BaseQRankSum=3.052;DP=1429;FS=4.346;HRun=2;HaplotypeScore=161.1798;InbreedingCoeff=-0.0182;MQ=59.04;MQ0=3;MQRankSum=3.536;QD=15.35;ReadPosRankSum=3.084;VQSLOD=3.9553;culprit=HaplotypeScore;set=inputR	GT:AD:DP:GQ:PL	0/1:47,47:94:99:1518,0,1743	0/0:24,0:24:72.24:0,72,1067	0/0:30,0:22:66.21:0,66,922	0/0:36,0:32:92.07:0,92,1171	0/0:44,0:44:99:0,120,1755	0/0:48,0:48:99:0,138,2067	0/0:47,0:47:99:0,141,2071	0/0:74,0:74:99:0,220,3207	0/0:42,0:42:99:0,126,1888	0/0:50,0:50:99:0,147,2168	0/0:44,0:44:99:0,123,1804	0/0:44,0:44:99:0,129,1895	0/0:56,0:56:99:0,169,2517	0/0:55,0:55:99:0,163,2381	0/0:58,0:58:99:0,175,2584	0/0:49,0:49:99:0,147,2183	0/0:61,0:61:99:0,184,2719	0/0:49,0:49:99:0,147,2181	0/0:51,0:47:99:0,132,1895	0/0:60,0:59:99:0,175,2580	0/0:91,0:91:99:0,265,3921	0/0:43,0:43:99:0,126,1818	0/0:42,0:42:99:0,117,1751	0/0:45,0:45:99:0,135,2023	0/0:33,0:33:96.25:0,96,1389	0/0:80,0:80:99:0,241,3575	0/0:68,0:68:99:0,199,2906	0/0:11,0:11:33.08:0,33,455
chr10_random	10155	.	TC	T	2134.52	PASS	AC=8;AF=0.167;AN=48;BaseQRankSum=5.584;DP=612;FS=0.658;HRun=1;HaplotypeScore=30.7248;InbreedingCoeff=0.7515;MQ=29.41;MQ0=204;MQRankSum=-6.034;QD=14.82;ReadPosRankSum=-1.278;VQSLOD=2.5864;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	./.	0/0:13,0:10:3.01:0,3,48	./.	./.	0/0:22,0:15:3.01:0,3,47	0/0:18,0:12:15.05:0,15,226	0/0:23,0:16:24.08:0,24,380	1/1:1,53:29:87.26:1167,87,0	0/0:14,0:10:9.03:0,9,143	0/0:27,0:16:48.16:0,48,767	0/0:16,0:14:6.02:0,6,96	0/0:10,0:7:12.04:0,12,191	0/0:18,0:14:15.05:0,15,240	0/0:19,0:18:21.07:0,21,335	0/0:20,0:13:12.02:0,12,169	0/0:17,0:13:20.81:0,21,335	./.	0/0:18,0:13:18.02:0,18,259	0/0:20,0:9:27.09:0,27,431	0/0:32,0:25:9.03:0,9,143	0/0:13,0:10:18.06:0,18,271	0/0:21,0:11:9.03:0,9,129	0/0:25,0:14:18.06:0,18,287	0/0:15,0:10:21.07:0,21,334	0/0:17,0:14:18.06:0,18,287	1/1:2,36:21:63.20:858,63,0	1/1:3,32:21:15.05:209,15,0	1/1:0,17:12:3.01:42,3,0
chr10_random	28755	.	A	AC	2341.38	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-1.935;DP=612;FS=0.533;HRun=0;HaplotypeScore=65.6682;InbreedingCoeff=0.9987;MQ=61.52;MQ0=7;MQRankSum=1.102;QD=37.76;ReadPosRankSum=1.645;VQSLOD=3.8163;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	1/1:1,23:22:60.20:956,60,0	0/0:17,0:17:48.16:0,48,664	0/0:13,0:13:39.13:0,39,534	0/0:14,0:14:36.52:0,37,454	0/0:29,0:29:81.27:0,81,1109	0/0:21,0:21:57.15:0,57,762	0/0:14,0:14:42.14:0,42,582	0/0:33,0:32:96.29:0,96,1293	1/1:1,12:12:30.10:475,30,0	0/0:27,0:27:81.27:0,81,1133	0/0:15,0:15:41.92:0,42,537	0/0:19,0:19:57.19:0,57,781	0/0:29,0:28:84.24:0,84,1131	0/0:27,0:26:75.21:0,75,1019	0/0:33,0:33:96.19:0,96,1246	0/0:27,0:27:81.20:0,81,1077	1/1:1,24:24:66.23:1053,66,0	0/0:12,0:12:36.12:0,36,503	0/0:18,0:18:51.17:0,51,700	0/0:28,0:28:81.24:0,81,1105	0/0:9,0:9:24.05:0,24,301	0/0:24,0:24:72.16:0,72,943	0/0:26,0:26:75.25:0,75,1035	0/0:15,0:15:39.09:0,39,516	0/0:25,0:23:69.20:0,69,935	0/0:22,0:22:63.15:0,63,840	0/0:43,0:42:99:0,123,1681	0/0:10,0:10:30.10:0,30,420
chr10_random	89332	.	ACC	A	685.98	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.549;DP=544;FS=7.009;HRun=3;HaplotypeScore=59.0355;InbreedingCoeff=0.7947;MQ=44.89;MQ0=87;MQRankSum=0.519;QD=34.30;ReadPosRankSum=2.341;VQSLOD=3.0122;culprit=HaplotypeScore;set=inputR	GT:AD:DP:GQ:PL	0/0:30,0:28:69.19:0,69,1257	0/0:8,0:5:15.05:0,15,289	0/0:12,0:5:15.05:0,15,234	0/0:11,0:5:12.04:0,12,169	0/0:17,0:14:39.13:0,39,710	0/0:21,0:16:45.15:0,45,868	0/0:21,0:19:57.15:0,57,1041	0/0:28,0:21:63.22:0,63,1196	0/0:27,0:22:63.22:0,63,1213	0/0:12,0:12:36.12:0,36,696	0/0:9,0:6:15.05:0,15,289	0/0:27,0:18:54.18:0,54,1023	0/0:25,0:22:63.22:0,63,1208	0/0:19,0:16:45.11:0,45,812	0/0:14,0:14:36.12:0,36,670	0/0:19,0:16:45.15:0,45,839	1/1:0,20:20:51.17:781,51,0	0/0:8,0:8:24.08:0,24,462	0/0:18,0:14:42.14:0,42,793	0/0:19,0:15:45.15:0,45,866	0/0:46,0:42:99:0,114,2201	0/0:20,0:16:45.15:0,45,853	0/0:16,0:12:36.12:0,36,691	0/0:29,0:29:72.25:0,72,1342	0/0:23,0:18:54.19:0,54,1042	0/0:21,0:19:54.14:0,54,1004	0/0:22,0:22:63.22:0,63,1196	0/0:2,0:1:3.01:0,3,58
chr10_random	89542	.	TAC	T	674.27	PASS	AB=0.916;AC=18;AF=0.346;AN=52;BaseQRankSum=4.623;DP=687;FS=1.515;HRun=0;HaplotypeScore=125.5314;InbreedingCoeff=-0.3888;MQ=46.61;MQ0=33;MQRankSum=-0.722;QD=1.56;ReadPosRankSum=-2.669;VQSLOD=2.0249;culprit=QD;set=inputR	GT:AD:DP:GQ:PL	0/0:25,0:38:3:0,3,26	0/0:14,1:14:15.05:0,15,225	./.	./.	1/1:12,7:19:12.03:132,12,0	0/0:21,3:23:18.06:0,18,267	0/1:24,2:25:8.97:9,0,291	0/0:27,0:26:3:0,3,25	0/1:13,11:23:17.91:236,0,18	0/0:26,0:24:23.98:0,24,256	0/1:25,0:24:5.08:5,0,81	0/1:17,3:19:54.09:54,0,78	0/1:25,2:27:46.80:47,0,155	0/1:23,1:24:2.96:3,0,372	0/1:27,3:29:31.57:32,0,352	0/1:30,1:32:2.06:2,0,539	0/0:9,0:18:3:0,3,26	0/1:19,0:17:9.64:10,0,101	0/0:14,0:11:3.01:0,3,45	0/1:25,3:26:15.04:15,0,182	0/1:39,2:40:44.53:45,0,418	0/0:26,0:25:15.05:0,15,220	0/1:24,1:24:18.01:18,0,165	0/1:30,4:33:52.79:53,0,493	0/0:16,0:16:3.01:0,3,45	0/1:22,2:23:45.12:45,0,121	0/1:19,5:23:99:99,0,281	0/1:9,0:9:13.77:14,0,39
chr10_random	89675	.	TAC	T	123.30	PASS	AB=0.950;AC=9;AF=0.214;AN=42;BaseQRankSum=1.510;DP=635;FS=6.374;HRun=0;HaplotypeScore=66.1651;InbreedingCoeff=0.2363;MQ=35.72;MQ0=352;MQRankSum=-0.441;QD=0.80;ReadPosRankSum=0.497;VQSLOD=0.5145;culprit=QD;set=inputR	GT:AD:DP:GQ:PL	./.	0/0:5,0:3:6.02:0,6,85	0/0:44,1:7:6.02:0,6,68	0/1:43,0:9:4.32:45,0,4	./.	./.	0/0:10,0:4:0:0,0,0	0/1:20,3:10:38.33:61,0,38	1/1:3,22:16:8.86:85,9,0	0/0:31,0:14:36.10:0,36,543	./.	0/0:29,3:16:3.01:0,3,47	0/0:36,2:17:20.98:0,21,308	0/0:30,1:18:15.03:0,15,211	0/0:35,2:19:0.90:0,1,154	0/0:27,1:16:5.57:0,6,94	1/1:6,0:1:2.84:14,3,0	0/0:17,1:3:3.11:0,3,8	0/1:18,1:9:26.32:26,0,68	./.	./.	0/1:24,0:13:0:0,0,0	0/0:18,0:8:2.72:0,3,47	0/0:28,1:11:0:0,0,0	0/1:10,1:4:0:0,0,0	0/0:19,0:7:15.51:0,16,215	0/0:11,1:7:3.01:0,3,47	./.
chr10_random	94955	.	G	GA	1153.14	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.084;DP=564;FS=13.136;HRun=6;HaplotypeScore=45.4345;InbreedingCoeff=0.8371;MQ=36.06;MQ0=147;MQRankSum=-0.014;QD=19.88;ReadPosRankSum=0.194;VQSLOD=1.8455;culprit=HaplotypeScore;set=inputR	GT:AD:DP:GQ:PL	0/0:16,0:12:18.04:0,18,184	0/0:7,0:6:18.04:0,18,184	0/0:7,0:1:3.01:0,3,30	0/0:13,0:7:18.03:0,18,178	1/1:4,36:29:66.13:784,66,0	0/0:35,0:29:69.16:0,69,703	0/0:13,0:10:27.04:0,27,268	0/0:28,0:16:39.09:0,39,398	1/1:0,18:17:39.12:490,39,0	0/0:24,0:12:33.07:0,33,337	0/0:31,0:21:51.11:0,51,520	0/0:15,0:14:33.07:0,33,336	0/0:22,0:19:54.12:0,54,551	0/0:15,0:14:33.07:0,33,336	0/0:35,0:29:66.14:0,66,673	0/0:22,1:19:4.37:0,4,360	0/0:14,0:10:27.06:0,27,275	0/0:7,0:5:15.03:0,15,153	0/0:8,0:7:21.05:0,21,214	0/0:22,0:14:36.08:0,36,367	0/0:16,0:14:39.06:0,39,389	0/0:27,0:15:42.09:0,42,428	0/0:22,0:17:42.09:0,42,428	0/0:27,0:25:68.31:0,68,702	0/0:19,0:10:27.06:0,27,275	0/0:23,0:18:51.10:0,51,513	0/0:27,0:18:48.11:0,48,489	0/0:10,0:7:21.05:0,21,214
chr10_random	95046	.	ATAACG	A	1750.33	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.797;DP=683;FS=0.723;HRun=0;HaplotypeScore=121.7776;InbreedingCoeff=0.9902;MQ=61.51;MQ0=0;MQRankSum=1.557;QD=50.01;ReadPosRankSum=0.987;VQSLOD=3.9958;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	1/1:1,13:14:27.09:602,27,0	0/0:7,0:7:15.05:0,15,479	0/0:14,0:12:32.32:0,32,905	0/0:25,0:22:66.22:0,66,1929	0/0:35,0:35:81.28:0,81,2476	0/0:42,0:42:99:0,120,3589	0/0:25,0:25:72.25:0,72,2241	0/0:39,0:39:99:0,108,3353	0/0:23,0:23:57.20:0,57,1801	0/0:28,0:28:78.27:0,78,2512	0/0:21,0:21:51.14:0,51,1507	0/0:25,0:25:72.25:0,72,2234	0/0:36,0:36:99:0,99,3163	0/0:32,0:32:93.28:0,93,2749	0/0:29,0:29:75.18:0,75,2084	0/0:30,0:30:90.25:0,90,2716	1/1:0,21:21:57.20:1270,57,0	0/0:10,0:10:27.09:0,27,842	0/0:23,0:23:66.23:0,66,2084	0/0:28,0:28:81.28:0,81,2553	0/0:21,0:21:60.21:0,60,1861	0/0:19,0:19:48.16:0,48,1532	0/0:18,0:18:48.14:0,48,1461	0/0:17,0:17:51.18:0,51,1634	0/0:22,0:22:54.19:0,54,1689	0/0:29,0:29:84.27:0,84,2612	0/0:40,0:40:99:0,108,3370	0/0:9,0:9:27.09:0,27,870
chr10_random	101863	.	GTCCATCCATCCATCCA	G	1328.10	PASS	AB=0.846;AC=7;AF=0.130;AN=54;BaseQRankSum=6.107;DP=530;FS=3.666;HRun=0;HaplotypeScore=215.6906;InbreedingCoeff=0.7515;MQ=62.44;MQ0=8;MQRankSum=-5.250;QD=21.42;ReadPosRankSum=-1.411;VQSLOD=2.6415;culprit=QD;set=inputR	GT:AD:DP:GQ:PL	1/1:22,4:26:15.52:553,16,0	0/0:15,0:15:24.08:0,24,1626	./.	0/0:17,0:12:1.25:0,1,3	1/1:9,7:16:9.03:257,9,0	0/0:21,0:21:48.16:0,48,3210	0/0:22,0:22:51.18:0,51,3395	0/0:35,0:35:33.10:0,33,1340	1/1:5,4:9:18.06:613,18,0	0/0:20,0:20:48.16:0,48,3515	0/0:21,0:21:51.18:0,51,3428	0/0:16,0:16:33.11:0,33,2368	0/0:25,0:25:57.18:0,57,3623	0/0:28,0:28:66.21:0,66,4699	0/0:23,0:23:54.19:0,54,3440	0/0:18,0:19:42.14:0,42,2876	0/1:9,0:11:45.14:45,0,73	0/0:9,0:9:21:0,21,1340	0/0:12,0:12:18.06:0,18,1225	0/0:19,0:19:45.15:0,45,3066	0/0:22,0:22:48.16:0,48,3101	0/0:8,0:8:18.06:0,18,1100	0/0:22,0:22:39.13:0,39,2589	0/0:12,0:13:27.09:0,27,1546	0/0:20,0:20:36.12:0,36,2556	0/0:25,0:25:42.14:0,42,2792	0/0:28,0:28:69.22:0,69,4422	0/0:3,0:3:9.03:0,9,682
chr10_random	101983	.	A	AT	2103	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-4.178;DP=565;FS=2.052;HRun=9;HaplotypeScore=56.4800;InbreedingCoeff=0.9361;MQ=76.58;MQ0=1;MQRankSum=-4.288;QD=20.22;ReadPosRankSum=0.446;VQSLOD=4.1144;culprit=HaplotypeScore;set=inputR	GT:AD:DP:GQ:PL	1/1:4,27:31:66.13:716,66,0	0/0:7,0:7:18:0,18,156	0/0:12,0:12:23.58:0,24,191	0/0:19,2:20:3.32:0,3,271	1/1:5,27:32:72.06:766,72,0	0/0:22,0:22:56.99:0,57,495	0/0:18,0:18:50.98:0,51,440	0/0:36,0:36:83.93:0,84,720	1/1:1,20:21:28.12:538,28,0	0/0:30,0:30:80.97:0,81,703	0/0:19,1:20:23.80:0,24,433	0/0:16,0:16:35.96:0,36,306	0/0:22,0:22:59.98:0,60,521	0/0:18,0:18:47.97:0,48,414	0/0:29,0:29:71.98:0,72,625	0/0:20,0:21:53.98:0,54,469	1/1:2,3:20:40.20:243,40,0	0/0:15,0:14:26.98:0,27,234	0/0:17,0:18:47.01:0,47,394	0/0:17,0:17:44.99:0,45,391	0/0:4,0:4:9:0,9,78	0/0:15,0:15:44.99:0,45,391	0/0:14,0:14:41.99:0,42,365	0/0:18,0:18:41.93:0,42,360	0/0:26,0:26:74.96:0,75,643	0/0:25,0:25:68.98:0,69,597	0/0:23,0:23:62.98:0,63,547	0/0:14,0:14:32.94:0,33,275
chr10_random	102425	.	ATAGTAGTAG	A	874.87	PASS	AB=0.968;AC=5;AF=0.096;AN=52;BaseQRankSum=5.543;DP=630;FS=11.693;HRun=0;HaplotypeScore=176.6731;InbreedingCoeff=0.7749;MQ=68.86;MQ0=4;MQRankSum=-4.993;QD=11.66;ReadPosRankSum=-0.895;VQSLOD=1.6217;culprit=QD;set=inputR	GT:AD:DP:GQ:PL	0/0:27,0:27:39.13:0,39,1673	0/0:6,0:15:26.93:0,27,444	./.	./.	1/1:9,17:26:22.67:417,23,0	0/0:23,0:24:39.13:0,39,1294	0/0:16,0:16:24.05:0,24,672	0/0:40,0:39:48.15:0,48,870	1/1:7,12:19:21.07:573,21,0	0/0:24,0:26:63.22:0,63,2185	0/0:21,0:22:42.14:0,42,1706	0/0:22,0:22:54.17:0,54,2030	0/0:27,0:27:54.17:0,54,2069	0/0:33,0:33:63.22:0,63,2448	0/0:37,0:36:72.25:0,72,2533	0/1:29,1:30:9.05:9,0,2838	0/0:13,0:17:30.10:0,30,489	0/0:22,0:22:38.76:0,39,1213	0/0:9,0:8:15.02:0,15,505	0/0:20,0:20:45.15:0,45,1649	0/0:24,0:24:39.12:0,39,1413	0/0:15,0:16:36.12:0,36,1092	0/0:9,0:9:18.06:0,18,763	0/0:24,0:24:51.17:0,51,1675	0/0:23,0:23:49.41:0,49,1758	0/0:17,0:18:39.12:0,39,1421	0/0:46,0:46:93.32:0,93,3416	0/0:4,0:4:12.04:0,12,387
chr10_random	102548	.	ATAG	A	230.14	PASS	AB=0.966;AC=3;AF=0.054;AN=56;BaseQRankSum=5.084;DP=767;FS=1.028;HRun=0;HaplotypeScore=118.8617;InbreedingCoeff=0.4872;MQ=54.96;MQ0=17;MQRankSum=-0.351;QD=5.23;ReadPosRankSum=-0.929;VQSLOD=2.0012;culprit=QD;set=inputR	GT:AD:DP:GQ:PL	1/1:7,9:16:6.92:310,7,0	0/0:12,0:12:30.08:0,30,501	0/0:42,0:13:27.02:0,27,412	0/0:37,0:9:17.39:0,17,121	0/0:35,1:36:71.55:0,72,1313	0/0:32,0:32:81.28:0,81,1597	0/0:17,1:18:2.38:0,2,664	0/0:46,1:45:84.24:0,84,1400	0/0:15,0:15:28.90:0,29,496	0/0:34,0:34:81.28:0,81,1542	0/0:19,0:19:39.13:0,39,759	0/0:24,0:24:57.18:0,57,1042	0/0:32,0:32:81.26:0,81,1509	0/0:34,0:34:78.27:0,78,1487	0/0:40,0:40:96.31:0,96,1764	0/0:23,0:22:54.19:0,54,1050	0/0:15,0:17:9.45:0,9,106	0/0:22,0:22:49.69:0,50,807	0/0:12,0:11:21.07:0,21,353	0/0:27,0:27:60.21:0,60,1189	0/1:27,1:28:8.53:9,0,1073	0/0:27,1:28:32.48:0,32,1195	0/0:32,0:32:87.30:0,87,1650	0/0:26,0:26:45.11:0,45,815	0/0:24,1:25:20.48:0,20,1147	0/0:33,0:33:75.25:0,75,1425	0/0:41,0:41:90.31:0,90,1703	0/0:14,0:14:30.10:0,30,576
chr10_random	102579	.	CAGT	C	129.27	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=7.426;DP=769;FS=0.851;HRun=0;HaplotypeScore=124.3841;InbreedingCoeff=0.3271;MQ=55.63;MQ0=25;MQRankSum=-4.602;QD=1.60;ReadPosRankSum=-2.614;VQSLOD=1.5259;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	1/1:7,8:13:14.99:157,15,0	0/0:10,0:10:24.07:0,24,452	0/0:39,0:8:15.04:0,15,251	0/0:39,0:11:11.53:0,12,167	0/1:32,0:32:11.53:12,0,343	0/0:31,0:31:57.20:0,57,1113	0/0:19,0:19:42.13:0,42,787	0/0:50,0:47:90.28:0,90,1602	0/1:19,0:19:31.57:32,0,85	0/0:32,0:32:72.23:0,72,1374	0/0:20,0:20:48.16:0,48,936	0/0:29,0:29:75.26:0,75,1492	0/0:32,0:32:72.22:0,72,1387	0/0:34,0:34:75.26:0,75,1473	0/0:41,0:41:99:0,105,2058	0/0:24,0:23:60.21:0,60,1174	0/1:14,0:15:48.40:48,0,95	0/0:23,0:23:51.15:0,51,939	0/0:12,0:11:33.11:0,33,602	0/0:29,0:29:78.24:0,78,1426	0/0:28,0:28:57.20:0,57,1141	0/0:30,0:30:72.24:0,72,1348	0/0:33,1:34:47.31:0,47,1600	0/0:24,0:24:54.18:0,54,1003	0/0:28,0:28:69.24:0,69,1370	0/0:35,0:35:87.28:0,87,1670	0/0:32,0:32:60.18:0,60,1130	0/0:13,0:13:27.07:0,27,458
chr10_random	102600	.	TAAC	T	858.70	PASS	AB=0.679;AC=5;AF=0.089;AN=56;BaseQRankSum=9.765;DP=743;FS=3.024;HRun=0;HaplotypeScore=112.8879;InbreedingCoeff=0.6913;MQ=54.60;MQ0=46;MQRankSum=-4.718;QD=13.85;ReadPosRankSum=1.652;VQSLOD=3.5280;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	0/0:17,0:15:4.12:0,4,56	0/0:8,0:8:24.08:0,24,546	0/0:42,0:5:15.05:0,15,304	0/0:49,0:6:14.84:0,15,248	1/1:11,16:27:8.77:274,9,0	0/0:25,0:25:75.26:0,75,1631	0/0:18,0:18:54.18:0,54,1102	0/0:40,0:37:99:0,111,2118	1/1:10,6:16:32.21:365,32,0	0/0:26,0:26:75.26:0,75,1700	0/0:19,0:19:54.19:0,54,1209	0/0:33,0:33:99:0,99,2207	0/0:27,0:27:61.25:0,61,1700	0/0:30,1:31:90.31:0,90,2011	0/0:39,0:39:99:0,114,2512	0/0:24,0:24:72.25:0,72,1538	0/1:10,9:19:99:343,0,248	0/0:21,0:21:60.20:0,60,1283	0/0:15,0:14:36.12:0,36,752	0/0:25,0:25:69.24:0,69,1561	0/0:25,0:25:75.25:0,75,1564	0/0:28,0:28:84.28:0,84,1796	0/0:33,0:32:92.51:0,93,1922	0/0:24,0:24:60.21:0,60,1344	0/0:29,1:30:87.30:0,87,1912	0/0:38,0:38:99:0,111,2379	0/0:27,0:27:78.25:0,78,1606	0/0:16,0:16:48.16:0,48,1031
chr10_random	102601	.	A	AGT	438.89	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.440;DP=742;FS=1.790;HRun=0;HaplotypeScore=101.8266;InbreedingCoeff=0.9416;MQ=54.74;MQ0=44;MQRankSum=-0.480;QD=10.45;ReadPosRankSum=1.106;VQSLOD=3.1386;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	0/0:17,0:15:20.19:0,20,166	0/0:8,0:8:24.08:0,24,386	0/0:42,0:5:15.05:0,15,244	0/0:49,0:6:14.86:0,15,175	1/1:17,9:26:12.62:390,13,0	0/0:26,0:26:75.26:0,75,1190	0/0:18,0:18:54.14:0,54,828	0/0:42,0:39:99:0,111,1720	1/1:11,5:16:11.86:160,12,0	0/0:29,0:29:75.26:0,75,1203	0/0:19,0:19:54.18:0,54,865	0/0:33,0:33:99:0,99,1570	0/0:27,0:27:81.25:0,81,1276	0/0:31,0:31:90.31:0,90,1436	0/0:38,0:38:99:0,114,1814	0/0:24,0:24:72.25:0,72,1153	0/0:19,0:19:15.45:0,15,316	0/0:20,0:20:60.20:0,60,944	0/0:13,0:12:36.11:0,36,554	0/0:25,0:25:69.23:0,69,1096	0/0:25,0:25:75.24:0,75,1159	0/0:28,0:28:84.28:0,84,1305	0/0:32,0:31:93.29:0,93,1425	0/0:24,0:24:60.20:0,60,962	0/0:30,0:30:87.30:0,87,1387	0/0:38,0:38:99:0,111,1730	0/0:27,0:27:78.01:0,78,1207	0/0:16,0:16:48.16:0,48,735
chr10_random	102602	.	A	AG	133.91	PASS	AB=0.752;AC=2;AF=0.036;AN=56;BaseQRankSum=6.457;DP=736;FS=4.922;HRun=0;HaplotypeScore=90.0280;InbreedingCoeff=0.0075;MQ=54.74;MQ0=43;MQRankSum=-0.725;QD=3.19;ReadPosRankSum=0.671;VQSLOD=2.3804;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	0/0:18,0:16:28.65:0,29,232	0/0:8,0:8:24.08:0,24,335	0/0:42,0:5:15.05:0,15,208	0/0:48,0:6:14.98:0,15,161	0/1:17,9:26:13.14:177,0,13	0/0:26,0:26:78.23:0,78,1056	0/0:18,0:18:54.13:0,54,731	0/0:41,0:38:99:0,114,1558	0/1:11,5:16:28.99:45,0,29	0/0:30,0:30:81.72:0,82,1103	0/0:18,0:18:54.18:0,54,755	0/0:34,0:34:99:0,99,1382	0/0:27,0:27:81.24:0,81,1095	0/0:31,0:31:90.30:0,90,1258	0/0:37,0:37:99:0,111,1534	0/0:24,0:24:72.24:0,72,1007	0/0:19,0:19:43.81:0,44,358	0/0:20,0:20:60.20:0,60,831	0/0:13,0:12:36.11:0,36,489	0/0:23,0:23:69.20:0,69,944	0/0:25,0:25:75.24:0,75,1029	0/0:28,0:28:84.24:0,84,1127	0/0:33,0:32:87.29:0,87,1211	0/0:23,0:23:60.20:0,60,838	0/0:30,0:30:87.76:0,88,1216	0/0:36,0:36:99:0,108,1510	0/0:26,0:26:75.25:0,75,1047	0/0:16,0:16:48.16:0,48,671
chr10_random	102606	.	TAAC	T	847.65	PASS	AB=0.537;AC=5;AF=0.089;AN=56;BaseQRankSum=9.242;DP=745;FS=6.185;HRun=0;HaplotypeScore=112.1220;InbreedingCoeff=0.7469;MQ=54.78;MQ0=44;MQRankSum=-2.615;QD=13.24;ReadPosRankSum=-0.696;VQSLOD=2.9049;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	0/1:3,19:20:5.18:416,0,5	0/0:8,0:8:24.08:0,24,482	0/0:42,0:5:3.05:0,3,157	0/0:45,0:5:12.04:0,12,201	1/1:24,0:25:9.62:250,10,0	0/0:25,0:25:75.26:0,75,1463	0/0:18,0:18:54.18:0,54,966	0/0:38,0:35:99:0,102,1700	1/1:17,0:17:31.60:305,32,0	0/0:33,0:33:46.98:0,47,1861	0/0:19,0:19:57.19:0,57,1109	0/0:34,0:34:99:0,102,2102	0/0:26,0:26:54.83:0,55,1392	0/0:32,0:32:93.32:0,93,1804	0/0:36,0:36:99:0,108,2115	0/0:24,0:23:56.96:0,57,1130	0/0:19,0:19:39.95:0,40,156	0/0:18,0:18:54.11:0,54,1025	0/0:14,0:13:38.92:0,39,672	0/0:25,0:25:75.25:0,75,1429	0/0:27,0:27:78.73:0,79,1434	0/0:28,0:28:84.12:0,84,1618	0/0:32,0:31:93.30:0,93,1739	0/0:22,1:23:57.20:0,57,1172	0/0:33,0:33:93.32:0,93,1833	0/0:39,0:39:99:0,111,2215	0/0:27,0:27:71.35:0,71,1382	0/0:16,0:16:48.16:0,48,1069
chr10_random	102609	.	CAGT	C	125.23	PASS	AB=0.975;AC=7;AF=0.130;AN=54;BaseQRankSum=7.796;DP=750;FS=2.706;HRun=0;HaplotypeScore=115.3577;InbreedingCoeff=0.2672;MQ=54.64;MQ0=43;MQRankSum=-4.488;QD=0.85;ReadPosRankSum=-2.480;VQSLOD=1.6471;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	1/1:23,0:21:20.87:113,21,0	0/0:8,0:8:12.04:0,12,233	./.	0/0:45,0:5:3:0,3,29	0/1:25,0:25:1.11:38,0,1	0/0:25,0:25:33.10:0,33,606	0/0:20,0:20:27.09:0,27,480	0/1:37,0:33:9.64:10,0,381	0/1:19,0:19:12.30:48,0,12	0/0:32,0:33:52.42:0,52,949	0/0:18,0:18:30.09:0,30,531	0/0:34,0:34:69.24:0,69,1324	0/0:27,0:27:36.98:0,37,796	0/0:32,0:32:45.15:0,45,843	0/0:36,1:37:23.07:0,23,1035	0/0:19,0:22:39.11:0,39,620	0/0:20,0:20:27.09:0,27,511	0/0:19,0:19:33.58:0,34,626	0/1:14,1:13:25.09:25,0,208	0/0:26,0:26:45.15:0,45,834	0/1:27,2:29:23.12:23,0,846	0/0:27,0:28:24.15:0,24,750	0/0:30,0:29:48.13:0,48,837	0/0:24,0:24:36.12:0,36,688	0/0:33,0:33:57.18:0,57,1033	0/0:38,0:38:75.25:0,75,1382	0/0:24,2:26:8.01:0,8,789	0/0:16,0:16:39.13:0,39,756
chr10_random	102814	.	G	GGTT	104.08	PASS	AB=0.613;AC=3;AF=0.054;AN=56;BaseQRankSum=7.179;DP=577;FS=1.803;HRun=0;HaplotypeScore=89.1299;InbreedingCoeff=0.6156;MQ=67.47;MQ0=1;MQRankSum=0.951;QD=2.31;ReadPosRankSum=-0.435;VQSLOD=1.6296;culprit=QD;set=inputR	GT:AD:DP:GQ:PL	1/1:2,0:25:15.50:96,16,0	0/0:12,0:12:33.10:0,33,536	0/0:8,0:9:26.87:0,27,289	0/0:6,0:6:11.95:0,12,106	0/0:8,0:31:69.91:0,70,462	0/0:28,0:29:84.16:0,84,1320	0/0:13,0:16:45.09:0,45,725	0/0:41,0:42:99:0,123,1749	0/0:3,0:15:17.14:0,17,138	0/0:21,0:21:63.17:0,63,987	0/0:24,0:26:68.88:0,69,957	0/0:23,0:23:68.38:0,68,1048	0/0:19,0:21:63.12:0,63,890	0/0:23,0:24:69.12:0,69,1064	0/0:19,0:23:67.43:0,67,1009	0/0:16,0:17:51.14:0,51,817	0/1:7,1:19:99:110,0,114	0/0:13,0:13:36.08:0,36,586	0/0:17,0:18:51.11:0,51,798	0/0:25,0:29:83.92:0,84,1222	0/0:21,0:21:60.13:0,60,994	0/0:18,0:21:63.06:0,63,968	0/0:15,0:15:35.95:0,36,630	0/0:15,0:15:45.14:0,45,780	0/0:17,0:17:51.03:0,51,770	0/0:27,0:30:89.47:0,89,1262	0/0:26,0:26:68.95:0,69,1088	0/0:10,0:10:30.10:0,30,537
chr10_random	132094	.	CTCTA	C	2861.96	PASS	AB=0.989;AC=25;AF=0.500;AN=50;BaseQRankSum=6.909;DP=573;FS=6.214;HRun=0;HaplotypeScore=126.3866;InbreedingCoeff=0.7273;MQ=41.91;MQ0=111;MQRankSum=0.182;QD=10.26;ReadPosRankSum=-0.622;VQSLOD=2.6357;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	0/0:28,0:25:24.04:0,24,407	1/1:4,4:7:6.02:92,6,0	./.	./.	1/1:26,0:22:21.07:318,21,0	1/1:14,15:22:33.11:505,33,0	1/1:9,7:15:9.03:138,9,0	./.	0/1:15,0:9:0.61:23,0,1	0/1:28,1:21:15.79:16,0,505	0/0:14,0:13:12.04:0,12,240	1/1:6,8:13:15.05:229,15,0	0/0:29,0:27:48.16:0,48,1071	0/0:24,0:19:12.04:0,12,255	0/0:25,0:22:27.09:0,27,595	1/1:15,0:26:21.02:195,21,0	0/0:22,0:19:30.57:0,31,566	1/1:3,9:10:12.04:183,12,0	1/1:6,2:8:6.02:92,6,0	1/1:10,14:20:24.08:367,24,0	1/1:5,7:8:18.06:275,18,0	0/0:9,0:8:15.05:0,15,349	0/0:25,0:18:39.13:0,39,887	0/1:23,0:16:29.59:30,0,184	0/0:31,0:25:42.14:0,42,886	0/0:28,0:24:48.09:0,48,990	1/1:8,22:27:39.11:596,39,0	0/0:4,0:4:9.03:0,9,210
chr10_random	132394	.	CGT	C	458.72	PASS	AB=0.891;AC=21;AF=0.404;AN=52;BaseQRankSum=6.353;DP=524;FS=0.672;HRun=0;HaplotypeScore=83.6508;InbreedingCoeff=-0.3402;MQ=58.36;MQ0=13;MQRankSum=-0.396;QD=1.25;ReadPosRankSum=1.739;VQSLOD=1.6273;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	0/1:35,0:34:1.56:2,0,33	0/0:7,0:8:6.01:0,6,70	./.	./.	0/0:32,0:32:1.23:0,1,3	0/1:15,4:19:52.55:67,0,53	0/1:13,1:13:7.60:8,0,122	0/0:23,0:23:4.24:0,4,28	1/1:11,0:11:10.55:46,11,0	0/0:17,0:16:5.98:0,6,49	0/1:17,0:19:7.93:8,0,123	0/1:17,3:20:5.49:5,0,282	0/1:15,7:23:28.64:29,0,118	0/0:11,0:11:18.04:0,18,244	0/1:13,1:14:5.43:5,0,303	0/1:16,4:20:70.47:70,0,239	1/1:27,0:27:13.09:140,13,0	0/0:23,0:23:29.02:0,29,307	0/1:24,0:22:32.75:33,0,34	0/1:18,5:23:35.07:35,0,257	0/1:19,0:17:7.87:8,0,58	0/1:14,4:16:45.27:45,0,129	0/1:19,0:19:11.72:12,0,129	0/1:10,1:11:11.46:11,0,245	0/1:10,3:12:23.48:23,0,80	0/1:18,1:19:9.72:10,0,194	0/1:13,5:17:49.99:50,0,118	0/0:6,0:5:8.24:0,8,89
chr10_random	132431	.	GTGTGT	G	427	PASS	AB=0.809;AC=4;AF=0.071;AN=56;BaseQRankSum=8.168;DP=535;FS=3.857;HRun=0;HaplotypeScore=113.7546;InbreedingCoeff=-0.0741;MQ=51.95;MQ0=32;MQRankSum=0.150;QD=3.85;ReadPosRankSum=4.260;VQSLOD=1.3565;culprit=QD;set=inputR	GT:AD:DP:GQ:PL	0/1:40,7:46:3.01:3,0,288	0/0:6,0:6:14.70:0,15,293	0/0:15,0:2:6.02:0,6,72	0/0:23,0:2:3.01:0,3,37	0/1:19,3:22:7.86:8,0,130	0/0:23,0:23:46.36:0,46,787	0/0:18,0:16:34.05:0,34,671	0/0:21,0:20:57.18:0,57,845	0/1:11,5:16:19.49:194,0,19	0/0:9,0:9:26.30:0,26,428	0/0:19,0:18:30.57:0,31,621	0/0:20,0:20:48.14:0,48,1082	0/0:19,0:18:28.03:0,28,605	0/0:11,0:11:33.11:0,33,784	0/0:14,0:14:39.12:0,39,953	0/0:17,0:15:38.86:0,39,834	0/1:16,0:26:99:319,0,102	0/0:22,0:22:61.76:0,62,1241	0/0:19,0:15:45.12:0,45,717	0/0:26,0:26:66.22:0,66,1342	0/0:14,0:11:24.08:0,24,493	0/0:18,0:15:36.12:0,36,712	0/0:24,0:24:57.19:0,57,1070	0/0:22,0:21:51.05:0,51,1121	0/0:15,0:14:24.06:0,24,414	0/0:26,0:26:76.78:0,77,1320	0/0:15,0:13:30.08:0,30,594	0/0:8,0:5:15.05:0,15,371
chr10_random	132433	.	GTGT	G	372.23	PASS	AB=0.926;AC=4;AF=0.071;AN=56;BaseQRankSum=8.554;DP=526;FS=3.383;HRun=0;HaplotypeScore=96.5816;InbreedingCoeff=-0.0859;MQ=52.24;MQ0=28;MQRankSum=-0.474;QD=3.61;ReadPosRankSum=3.421;VQSLOD=1.8667;culprit=QD;set=inputR	GT:AD:DP:GQ:PL	0/1:45,0:44:20.03:20,0,241	0/0:6,0:6:14.65:0,15,242	0/0:14,0:2:6.02:0,6,72	0/0:22,0:2:3.01:0,3,37	0/1:19,0:19:12.20:12,0,85	0/0:25,0:25:51.79:0,52,688	0/0:19,0:18:40.05:0,40,595	0/0:20,0:19:51.17:0,51,705	0/1:15,0:15:22.18:115,0,22	0/0:7,0:7:19.31:0,19,299	0/0:18,0:17:21.84:0,22,466	0/0:19,0:19:45.01:0,45,821	0/0:20,0:19:25.05:0,25,492	0/0:13,0:13:39.13:0,39,703	0/0:13,0:13:35.99:0,36,715	0/0:17,0:15:38.46:0,38,612	0/1:14,10:24:90.14:332,0,90	0/0:22,0:22:64.37:0,64,1062	0/0:18,0:14:39.10:0,39,533	0/0:27,0:27:62.94:0,63,1033	0/0:13,0:11:24.08:0,24,380	0/0:18,0:15:32.84:0,33,513	0/0:25,0:25:60.06:0,60,934	0/0:22,0:21:50.84:0,51,877	0/0:14,0:13:20.93:0,21,313	0/0:25,0:25:73.30:0,73,1062	0/0:18,0:16:35.84:0,36,526	0/0:8,0:5:15.05:0,15,287
chr10_random	132816	.	G	GA	3153.07	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=-12.401;DP=545;FS=4.018;HRun=5;HaplotypeScore=49.5321;InbreedingCoeff=0.9921;MQ=68.02;MQ0=0;MQRankSum=-0.277;QD=30.61;ReadPosRankSum=1.641;VQSLOD=4.1925;culprit=HaplotypeScore;set=inputR	GT:AD:DP:GQ:PL	1/1:5,30:35:87.28:1142,87,0	0/0:12,0:12:33.06:0,33,346	0/0:9,0:9:16.85:0,17,123	./.	1/1:3,29:32:75.24:986,75,0	0/0:19,0:19:51.10:0,51,533	0/0:22,0:22:60.09:0,60,623	0/0:21,0:21:63.13:0,63,652	1/1:1,14:15:36.12:473,36,0	0/0:24,0:24:66.15:0,66,696	0/0:21,0:21:54.12:0,54,571	0/0:19,0:19:51.11:0,51,539	0/0:21,0:21:60.09:0,60,607	0/0:18,0:18:54.10:0,54,562	0/0:28,0:28:81.13:0,81,834	0/0:20,0:20:54.11:0,54,564	1/1:1,20:21:54.18:710,54,0	0/0:15,0:15:39.05:0,39,400	0/0:13,0:13:39.06:0,39,398	0/0:22,0:22:63.15:0,63,670	0/0:14,0:14:42.11:0,42,451	0/0:15,0:15:39.06:0,39,402	0/0:20,0:20:57.07:0,57,590	0/0:9,0:9:27.05:0,27,281	0/0:24,0:24:66.12:0,66,686	0/0:25,0:25:75.16:0,75,782	0/0:41,0:41:99:0,111,1135	0/0:6,0:6:15.04:0,15,161
chr10_random	137019	.	T	TTCCTG	87.11	PASS	AC=2;AF=0.077;AN=26;BaseQRankSum=1.356;DP=366;FS=0.000;HRun=0;HaplotypeScore=27.5393;InbreedingCoeff=0.3877;MQ=32.54;MQ0=250;MQRankSum=-0.880;QD=5.44;ReadPosRankSum=-0.071;VQSLOD=0.4254;culprit=QD;set=inputR	GT:AD:DP:GQ:PL	./.	0/0:5,0:1:2.97:0,3,20	0/0:16,0:2:6.02:0,6,120	0/0:15,0:3:5.91:0,6,54	1/1:5,11:10:6.02:163,6,0	./.	./.	./.	./.	0/0:18,0:5:15.05:0,15,293	0/0:15,0:4:8.99:0,9,146	./.	0/0:13,0:1:2.97:0,3,20	./.	./.	./.	./.	0/0:11,0:1:3.01:0,3,63	./.	0/0:25,0:11:27.05:0,27,523	./.	0/0:12,0:7:18.02:0,18,334	0/0:20,0:11:29.93:0,30,457	./.	0/0:17,0:4:12.04:0,12,252	0/0:18,0:6:18.02:0,18,334	./.	./.
chr10_random	139305	.	AAAGGAGAGGAGACAGAC	A	790	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.013;DP=706;FS=1.618;HRun=0;HaplotypeScore=300.6257;InbreedingCoeff=0.9838;MQ=82.15;MQ0=1;MQRankSum=-4.137;QD=34.35;ReadPosRankSum=0.703;VQSLOD=2.3799;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	1/1:2,21:23:18.06:881,18,0	0/0:6,0:6:18.06:0,18,1277	0/0:42,0:36:99:0,107,4753	0/0:36,0:32:81.04:0,81,3824	0/0:28,0:28:81.26:0,81,5414	0/0:48,0:48:99:0,144,10104	0/0:22,0:22:66.22:0,66,4064	0/0:26,0:26:75.26:0,75,4962	0/0:20,0:20:57.18:0,57,4062	0/0:28,0:28:84.29:0,84,5877	0/0:23,0:23:69.24:0,69,5188	0/0:24,0:24:72.25:0,72,5715	0/0:22,0:22:66.18:0,66,3884	0/0:25,0:25:69.22:0,69,4781	0/0:28,0:28:84.28:0,84,6407	0/0:26,0:26:78.26:0,78,5440	0/0:29,0:29:84.29:0,84,6280	0/0:28,0:28:75.26:0,75,4749	0/0:13,0:13:39.13:0,39,2433	0/0:33,0:33:99:0,99,7380	0/0:23,0:23:63.22:0,63,4501	0/0:22,0:22:66.23:0,66,4675	0/0:16,0:16:45.15:0,45,3036	0/0:18,0:18:51.65:0,52,3345	0/0:25,0:25:72.25:0,72,5577	0/0:28,0:28:84.29:0,84,6045	0/0:32,0:32:93.32:0,93,7447	0/0:12,0:12:36.07:0,36,2073
chr10_random	139710	.	GT	G	1047.53	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.999;DP=672;FS=11.722;HRun=4;HaplotypeScore=87.9801;InbreedingCoeff=0.9947;MQ=80.69;MQ0=0;MQRankSum=-9.730;QD=20.95;ReadPosRankSum=1.128;VQSLOD=2.2431;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	0/0:22,0:21:63.21:0,63,880	0/0:11,0:11:30.10:0,30,419	0/0:19,0:20:52.98:0,53,620	0/0:22,0:22:39.74:0,40,455	1/1:8,25:33:65.98:720,66,0	0/0:41,0:41:90.63:0,91,1511	0/0:19,0:19:57.15:0,57,774	0/0:42,0:42:99:0,123,1693	1/1:1,16:17:44.82:449,45,0	0/0:30,0:30:87.29:0,87,1219	0/0:22,0:22:63.20:0,63,865	0/0:31,0:31:93.31:0,93,1302	0/0:35,0:35:99:0,99,1367	0/0:26,0:26:72.20:0,72,957	0/0:27,0:27:78.24:0,78,1059	0/0:23,1:24:33.42:0,33,887	0/0:14,0:14:39.10:0,39,526	0/0:12,0:12:33.09:0,33,444	0/0:27,0:27:81.26:0,81,1118	0/0:24,0:24:69.21:0,69,948	0/0:9,0:9:27.08:0,27,361	0/0:22,0:22:60.19:0,60,822	0/0:26,0:26:72.24:0,72,1007	0/0:14,0:14:42.14:0,42,587	0/0:33,0:33:99:0,99,1367	0/0:35,0:35:99:0,102,1405	0/0:27,0:27:81.24:0,81,1098	0/0:7,0:7:18.06:0,18,252
chr10_random	139717	.	ACC	A	443.62	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.391;DP=668;FS=8.575;HRun=4;HaplotypeScore=101.4358;InbreedingCoeff=0.9359;MQ=78.48;MQ0=0;MQRankSum=-8.707;QD=9.24;ReadPosRankSum=2.672;VQSLOD=-0.2414;culprit=HaplotypeScore;set=inputR	GT:AD:DP:GQ:PL	0/0:24,0:23:66.23:0,66,1221	0/0:8,0:8:24.08:0,24,450	0/0:21,0:21:60.21:0,60,1104	0/0:16,0:16:5.24:0,5,569	1/1:13,19:32:55.61:351,56,0	0/0:39,0:39:99:0,117,2180	0/0:20,0:20:57.18:0,57,1028	0/0:42,0:42:99:0,123,2268	1/1:6,10:16:29.80:214,30,0	0/0:30,0:30:90.31:0,90,1682	0/0:21,0:21:63.22:0,63,1158	0/0:32,0:32:90.31:0,90,1661	0/0:38,0:38:99:0,114,2125	0/0:22,0:22:66.23:0,66,1237	0/0:28,0:28:84.29:0,84,1563	0/0:21,1:22:39.80:0,40,1100	0/0:14,0:14:42.14:0,42,787	0/0:11,0:11:33.11:0,33,615	0/0:29,0:29:75.26:0,75,1400	0/0:24,0:24:72.25:0,72,1330	0/0:12,0:12:36.08:0,36,628	0/0:23,0:23:69.24:0,69,1280	0/0:25,0:25:72.24:0,72,1303	0/0:16,0:16:45.15:0,45,842	0/0:33,0:33:93.32:0,93,1742	0/0:35,0:35:99:0,105,1932	0/0:29,0:28:87.29:0,87,1575	0/0:6,0:6:18.06:0,18,337
chr10_random	139723	.	T	TGG	1061.47	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.727;DP=667;FS=4.179;HRun=0;HaplotypeScore=100.3534;InbreedingCoeff=0.9328;MQ=78.71;MQ0=0;MQRankSum=-7.416;QD=30.33;ReadPosRankSum=1.907;VQSLOD=5.7288;culprit=HaplotypeScore;set=inputR	GT:AD:DP:GQ:PL	0/0:23,0:22:69.22:0,69,1091	0/0:11,0:11:30.10:0,30,490	0/0:20,0:20:60.20:0,60,932	0/0:17,0:17:5.08:0,5,500	1/1:6,19:25:66.19:803,66,0	0/0:40,0:40:99:0,120,1917	0/0:19,0:19:57.18:0,57,905	0/0:40,0:40:99:0,117,1908	1/1:0,10:10:30.10:380,30,0	0/0:33,0:33:93.32:0,93,1516	0/0:24,0:24:72.23:0,72,1148	0/0:28,0:28:84.26:0,84,1320	0/0:40,0:40:99:0,117,1882	0/0:24,0:24:69.24:0,69,1124	0/0:28,0:28:84.28:0,84,1348	0/0:20,1:21:20.25:0,20,890	0/0:18,0:18:54.18:0,54,873	0/0:12,0:12:36.10:0,36,561	0/0:26,0:26:78.24:0,78,1225	0/0:27,0:27:78.27:0,78,1271	0/0:12,0:12:33.11:0,33,538	0/0:21,0:21:63.22:0,63,1026	0/0:25,0:25:75.26:0,75,1221	0/0:17,0:17:51.17:0,51,832	0/0:37,0:36:99:0,102,1633	0/0:35,0:35:99:0,105,1713	0/0:28,0:27:84.29:0,84,1368	0/0:6,0:6:18.06:0,18,294
chr10_random	140141	.	G	GA	1986.40	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.800;DP=850;FS=0.550;HRun=1;HaplotypeScore=82.2069;InbreedingCoeff=0.9997;MQ=80.20;MQ0=0;MQRankSum=-2.347;QD=34.25;ReadPosRankSum=0.953;VQSLOD=3.4400;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,1712	0/0:10,0:10:30.10:0,30,389	0/0:29,0:28:81.20:0,81,964	0/0:30,0:30:81.06:0,81,948	1/1:3,31:34:75.17:1074,75,0	0/0:22,0:22:60.19:0,60,779	0/0:31,0:31:90.29:0,90,1168	0/0:33,0:33:96.30:0,96,1232	1/1:0,24:24:69.23:1034,69,0	0/0:45,0:45:99:0,135,1752	0/0:23,0:23:69.22:0,69,895	0/0:32,0:32:90.29:0,90,1169	0/0:41,0:41:99:0,120,1543	0/0:33,0:33:99:0,99,1271	0/0:32,0:32:96.31:0,96,1247	0/0:33,0:33:99:0,99,1256	0/0:33,0:33:90.29:0,90,1168	0/0:19,0:19:51.17:0,51,662	0/0:29,0:29:87.27:0,87,1115	0/0:41,0:40:99:0,123,1562	0/0:37,0:37:99:0,108,1379	0/0:23,0:23:69.21:0,69,882	0/0:31,0:31:90.28:0,90,1152	0/0:42,0:42:99:0,120,1541	0/0:23,0:23:69.21:0,69,883	0/0:32,0:32:87.28:0,87,1130	0/0:30,0:30:81.26:0,81,1050	0/0:14,0:14:39.09:0,39,476
chr10_random	141544	.	G	GA	2554.73	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-8.314;DP=539;FS=0.459;HRun=6;HaplotypeScore=48.3872;InbreedingCoeff=0.9878;MQ=82.79;MQ0=0;MQRankSum=-4.321;QD=30.06;ReadPosRankSum=2.045;VQSLOD=4.1194;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	1/1:2,26:28:75.24:941,75,0	0/0:6,0:6:15.03:0,15,153	0/0:20,0:20:54.12:0,54,547	0/0:14,0:15:14.47:0,14,200	1/1:2,11:13:33.11:415,33,0	0/0:23,0:23:60.13:0,60,612	0/0:17,0:17:42.07:0,42,421	0/0:31,0:31:90.19:0,90,914	1/1:2,17:19:45.14:566,45,0	0/0:24,0:24:69.16:0,69,704	0/0:16,0:16:42.09:0,42,428	0/0:26,0:26:63.11:0,63,629	0/0:26,0:26:63.14:0,63,643	0/0:21,0:21:60.13:0,60,612	0/0:24,0:24:69.16:0,69,704	0/0:19,1:20:19.39:0,19,513	1/1:1,24:25:63.20:793,63,0	0/0:9,0:9:24.01:0,24,235	0/0:15,0:15:36.07:0,36,364	0/0:18,0:18:48.05:0,48,477	0/0:22,0:22:66.13:0,66,665	0/0:9,0:9:27.06:0,27,275	0/0:14,0:14:39.08:0,39,391	0/0:12,0:12:33.06:0,33,330	0/0:15,0:15:42.08:0,42,422	0/0:25,0:25:66.13:0,66,663	0/0:35,0:35:99:0,99,995	0/0:11,0:11:33.08:0,33,337
chr10_random	141779	.	CTCAT	C	306.05	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.578;DP=281;FS=0.000;HRun=0;HaplotypeScore=43.1849;InbreedingCoeff=0.7823;MQ=87.34;MQ0=1;MQRankSum=-1.613;QD=12.75;ReadPosRankSum=2.768;VQSLOD=1.9445;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	1/1:4,0:4:12.04:183,12,0	0/0:5,0:5:15.05:0,15,356	0/0:16,0:15:36.03:0,36,631	0/0:9,0:8:23.54:0,24,358	0/0:11,0:11:33.11:0,33,583	0/0:16,0:16:45.15:0,45,878	0/0:7,0:7:21.07:0,21,358	0/0:27,0:27:78.27:0,78,1412	0/0:5,0:5:15.05:0,15,247	0/0:7,0:7:21.07:0,21,436	0/0:10,0:10:30.09:0,30,475	0/0:12,0:12:36.12:0,36,666	0/0:12,0:12:36.12:0,36,709	0/0:9,0:9:27.09:0,27,514	0/0:6,0:6:18.06:0,18,373	0/0:12,0:12:36.11:0,36,694	1/1:0,19:20:12.04:233,12,0	0/0:7,0:7:21.07:0,21,391	0/0:20,0:20:60.21:0,60,1207	0/0:12,0:12:36.12:0,36,682	0/0:8,0:8:24.07:0,24,374	0/0:2,0:2:6.01:0,6,75	0/0:3,0:3:9.03:0,9,187	0/0:1,0:1:3.01:0,3,46	0/0:6,0:6:12.04:0,12,223	0/0:8,0:8:24.08:0,24,477	0/0:14,0:14:42.11:0,42,764	0/0:12,0:12:36.12:0,36,893
chr10_random	141781	.	C	CATAA	317.07	PASS	AC=10;AF=0.250;AN=40;BaseQRankSum=-1.632;DP=275;FS=2.969;HRun=0;HaplotypeScore=44.4548;InbreedingCoeff=0.5512;MQ=83.44;MQ0=1;MQRankSum=-2.899;QD=5.03;ReadPosRankSum=-2.298;VQSLOD=0.5207;culprit=QD;set=inputR	GT:AD:DP:GQ:PL	1/1:7,0:7:9.03:167,9,0	0/0:5,0:5:9.03:0,9,137	./.	./.	1/1:13,0:13:3.48:52,3,0	0/0:16,0:16:9.03:0,9,137	./.	1/1:30,0:30:4.98:12,5,0	./.	0/0:7,0:7:3.01:0,3,43	./.	0/0:12,0:12:6.02:0,6,91	0/0:11,0:11:9.03:0,9,137	0/0:8,0:8:6.02:0,6,91	0/0:6,0:6:6.02:0,6,91	0/0:12,0:12:9.03:0,9,136	0/0:20,0:20:12.01:0,12,112	1/1:5,2:7:6.02:139,6,0	0/0:18,0:18:12.04:0,12,183	0/0:12,0:12:6.02:0,6,91	./.	./.	0/0:3,0:3:3.01:0,3,46	./.	1/1:3,3:6:3.01:70,3,0	0/0:8,0:8:3.01:0,3,46	0/0:12,0:12:12.04:0,12,181	0/0:12,0:12:24.08:0,24,366
chr10_random	144444	.	G	GCAAT	2098.47	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.501;DP=604;FS=3.471;HRun=0;HaplotypeScore=99.0074;InbreedingCoeff=0.9824;MQ=96.68;MQ0=0;MQRankSum=-4.381;QD=65.58;ReadPosRankSum=1.820;VQSLOD=5.7953;culprit=HaplotypeScore;set=inputR	GT:AD:DP:GQ:PL	0/0:18,0:18:25.80:0,26,744	0/0:9,0:9:27.06:0,27,446	0/0:31,0:31:78.21:0,78,1381	0/0:28,0:29:77.20:0,77,1289	1/1:0,21:21:57.20:1493,57,0	0/0:25,0:25:72.25:0,72,1357	0/0:16,0:16:44.48:0,44,813	0/0:42,0:42:99:0,120,2153	1/1:0,9:11:27.09:726,27,0	0/0:27,0:27:72.23:0,72,1335	0/0:27,0:27:78.25:0,78,1437	0/0:20,0:20:60.18:0,60,1073	0/0:19,0:19:57.18:0,57,1028	0/0:22,0:22:63.22:0,63,1188	0/0:30,0:30:90.27:0,90,1627	0/0:18,0:18:51.15:0,51,927	0/0:25,0:25:75.26:0,75,1423	0/0:16,0:16:39.13:0,39,740	0/0:21,0:21:60.21:0,60,1139	0/0:25,0:24:72.25:0,72,1344	0/0:13,0:13:36.12:0,36,673	0/0:29,0:29:84.27:0,84,1553	0/0:26,0:26:72.23:0,72,1335	0/0:16,0:16:42.12:0,42,724	0/0:12,0:12:33.10:0,33,585	0/0:20,0:20:60.19:0,60,1074	0/0:32,0:32:96.26:0,96,1751	0/0:4,0:4:12.04:0,12,228
chr10_random	144552	.	GT	G	523.71	PASS	AB=0.851;AC=11;AF=0.196;AN=56;BaseQRankSum=8.900;DP=599;FS=5.817;HRun=13;HaplotypeScore=70.5925;InbreedingCoeff=0.5888;MQ=75.66;MQ0=1;MQRankSum=-1.993;QD=4.09;ReadPosRankSum=1.085;VQSLOD=1.1421;culprit=QD;set=inputR	GT:AD:DP:GQ:PL	1/1:3,0:18:26.47:77,26,0	0/0:7,1:8:2.13:0,2,182	0/0:36,1:22:21.19:0,21,133	0/0:11,0:8:8.90:0,9,66	1/1:10,9:19:31.01:222,31,0	0/0:26,4:32:6.05:0,6,504	0/0:13,1:14:14.09:0,14,288	0/0:32,1:39:49.94:0,50,617	1/1:2,17:19:38.75:282,39,0	0/0:30,0:31:62.13:0,62,613	0/0:15,1:18:13.11:0,13,334	0/0:20,0:20:45.01:0,45,419	0/0:21,0:21:51.06:0,51,484	0/0:22,1:24:33.24:0,33,448	0/0:25,0:25:58.66:0,59,519	0/0:21,0:21:32.15:0,32,456	1/1:1,0:19:28.48:82,28,0	0/1:9,2:11:9.12:9,0,193	0/0:19,0:20:13.91:0,14,263	0/0:21,0:21:18.77:0,19,308	0/0:12,0:12:17.15:0,17,198	0/0:19,0:21:50.86:0,51,467	0/0:24,1:28:5.60:0,6,342	0/1:21,3:24:5.89:6,0,404	0/1:14,2:18:12.62:13,0,259	0/0:27,1:29:8.76:0,9,402	0/0:31,0:30:50:0,50,598	0/0:8,0:8:21.03:0,21,204
chr10_random	146543	.	TTTTG	T	1406.74	PASS	AB=0.600;AC=3;AF=0.054;AN=56;BaseQRankSum=8.776;DP=704;FS=7.706;HRun=0;HaplotypeScore=122.9227;InbreedingCoeff=0.6069;MQ=66.01;MQ0=3;MQRankSum=0.379;QD=29.31;ReadPosRankSum=0.703;VQSLOD=3.3563;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	0/0:35,0:34:66.12:0,66,1067	0/0:14,0:14:33.04:0,33,603	0/0:19,0:17:7.71:0,8,215	0/0:24,0:19:26.57:0,27,411	1/1:7,23:30:68.94:949,69,0	0/0:26,0:26:57.12:0,57,1181	0/0:25,0:25:36.08:0,36,702	0/0:29,0:29:48.63:0,49,1078	0/1:6,12:18:30.38:563,0,30	0/0:30,0:30:60.21:0,60,1420	0/0:18,0:18:36.11:0,36,808	0/0:35,0:35:78.25:0,78,1828	0/0:24,0:24:42.14:0,42,1011	0/0:24,0:24:54.15:0,54,1186	0/0:26,0:26:48.10:0,48,944	0/0:33,0:33:60.16:0,60,1276	0/0:21,0:21:33.08:0,33,557	0/0:16,0:16:36.11:0,36,822	0/0:29,0:29:42.07:0,42,814	0/0:24,0:24:51.13:0,51,1085	0/0:23,0:23:46.03:0,46,1036	0/0:18,0:18:39.13:0,39,942	0/0:17,0:17:36.12:0,36,870	0/0:31,0:31:75.16:0,75,1529	0/0:29,0:28:72.23:0,72,1693	0/0:35,0:35:81.28:0,81,1957	0/0:37,0:37:84.20:0,84,1764	0/0:14,0:14:14.93:0,15,208
chr10_random	146571	.	G	GTTTA	1628.78	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.636;DP=694;FS=2.632;HRun=0;HaplotypeScore=113.3706;InbreedingCoeff=0.9913;MQ=64.92;MQ0=4;MQRankSum=-0.524;QD=25.85;ReadPosRankSum=2.939;VQSLOD=3.7613;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	1/1:10,28:38:42.14:1065,42,0	0/0:12,0:12:24.07:0,24,389	0/0:27,0:21:44.24:0,44,546	0/0:27,0:21:19.71:0,20,254	0/0:29,0:29:66.03:0,66,711	0/0:24,0:24:57.13:0,57,873	0/0:26,0:26:60.03:0,60,691	0/0:30,0:30:78.06:0,78,927	0/0:21,0:21:60.08:0,60,655	0/0:28,0:28:75.11:0,75,1054	0/0:17,0:17:36.06:0,36,515	0/0:31,0:31:87.21:0,87,1365	0/0:22,0:22:66.11:0,66,920	0/0:25,0:25:63.04:0,63,890	0/0:20,0:20:51.08:0,51,695	0/0:26,0:26:69.12:0,69,953	1/1:2,20:24:27.09:685,27,0	0/0:15,0:15:42.10:0,42,641	0/0:28,0:28:65.96:0,66,812	0/0:22,0:22:51.12:0,51,774	0/0:22,0:22:57.10:0,57,814	0/0:22,0:22:63.04:0,63,867	0/0:21,0:21:60.08:0,60,821	0/0:29,0:29:63.15:0,63,980	0/0:28,0:27:84.20:0,84,1293	0/0:32,0:32:90.27:0,90,1434	0/0:38,0:38:99:0,99,1402	0/0:9,0:9:17.98:0,18,173
chr10_random	147996	.	TA	T	258.14	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.059;DP=262;FS=0.000;HRun=8;HaplotypeScore=31.7672;InbreedingCoeff=0.7867;MQ=69.98;MQ0=1;MQRankSum=-0.082;QD=17.21;ReadPosRankSum=-0.287;VQSLOD=2.5031;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	0/0:10,0:10:27.08:0,27,322	0/0:5,0:5:12.04:0,12,145	0/0:12,0:10:12.09:0,12,216	0/0:7,0:5:10:0,10,70	1/1:0,8:8:24.04:231,24,0	0/0:5,0:5:15.05:0,15,181	0/0:18,0:18:48.14:0,48,574	0/0:10,0:10:18.05:0,18,201	1/1:3,4:7:15.02:145,15,0	0/0:6,0:6:15.03:0,15,169	0/0:7,0:7:21.03:0,21,238	0/0:6,0:6:15.05:0,15,180	0/0:8,0:8:21.06:0,21,253	0/0:9,0:9:24.04:0,24,274	0/0:9,0:9:15.05:0,15,181	0/0:4,0:4:12.04:0,12,145	0/0:21,0:21:57.17:0,57,688	0/0:9,0:9:15.05:0,15,181	0/0:12,0:12:27.08:0,27,316	0/0:8,0:8:24.06:0,24,278	0/0:16,0:16:42.11:0,42,494	0/0:4,0:4:9.03:0,9,109	0/0:8,0:8:21.06:0,21,254	0/0:12,0:12:33.10:0,33,399	0/0:12,0:12:33.10:0,33,398	0/0:12,0:12:30.09:0,30,362	0/0:16,0:16:45.14:0,45,543	0/0:1,0:1:3.01:0,3,36
chr10_random	150680	.	CTCAAAG	C	1232.45	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.779;DP=652;FS=11.847;HRun=0;HaplotypeScore=131.9777;InbreedingCoeff=0.9995;MQ=84.28;MQ0=0;MQRankSum=-6.663;QD=51.35;ReadPosRankSum=0.587;VQSLOD=3.2612;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,4051	0/0:12,0:12:36.11:0,36,1202	0/0:26,0:26:66.22:0,66,2088	0/0:15,0:15:42.09:0,42,1136	1/1:0,24:24:57.20:1327,57,0	0/0:20,0:20:60.16:0,60,1956	0/0:13,0:13:36.11:0,36,1091	0/0:28,0:28:75.26:0,75,2530	0/0:23,0:23:63.20:0,63,2155	0/0:15,0:15:45.15:0,45,1499	0/0:16,0:16:48.16:0,48,1711	0/0:30,0:30:87.28:0,87,2998	0/0:27,0:27:81.28:0,81,2879	0/0:32,0:32:96.33:0,96,3421	0/0:35,0:35:99:0,102,3409	0/0:19,0:19:54.19:0,54,1887	0/0:31,0:31:90.31:0,90,3199	0/0:17,0:17:51.18:0,51,1789	0/0:15,0:15:39.13:0,39,1244	0/0:28,0:28:81.26:0,81,2803	0/0:28,0:28:75.05:0,75,2579	0/0:18,0:18:48.15:0,48,1481	0/0:19,0:19:54.18:0,54,1772	0/0:12,0:12:36.12:0,36,1228	0/0:15,0:15:45.15:0,45,1602	0/0:29,0:29:87.29:0,87,2976	0/0:38,0:37:99:0,111,3864	0/0:24,0:24:72.25:0,72,2567
chr10_random	151034	.	CTCTT	C	398.63	PASS	AB=0.960;AC=12;AF=0.222;AN=54;BaseQRankSum=6.329;DP=606;FS=0.798;HRun=0;HaplotypeScore=100.7507;InbreedingCoeff=0.4788;MQ=62.53;MQ0=2;MQRankSum=2.457;QD=2.45;ReadPosRankSum=0.495;VQSLOD=1.9019;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	0/0:35,0:35:63.10:0,63,1212	0/0:17,0:17:15.05:0,15,352	./.	0/0:5,0:4:0:0,0,0	1/1:13,0:35:12.30:138,12,0	0/1:19,1:20:16.76:17,0,470	0/0:18,0:17:12.03:0,12,218	0/0:37,0:37:14.79:0,15,98	1/1:7,0:7:5.75:39,6,0	0/0:24,0:24:47.63:0,48,855	0/0:26,0:26:39.12:0,39,781	0/0:22,0:22:33.10:0,33,676	0/0:15,0:15:26.94:0,27,490	0/1:20,0:20:25.75:26,0,358	0/0:22,0:22:33.08:0,33,627	0/1:11,1:12:59.17:59,0,198	0/0:20,0:20:30.10:0,30,684	0/0:19,0:19:31.27:0,31,599	0/0:21,0:21:18.04:0,18,320	0/0:36,0:36:8.50:0,8,912	0/0:13,0:13:6.34:0,6,458	0/0:26,0:26:45.14:0,45,911	1/1:10,9:18:5.93:83,6,0	1/1:8,14:22:12.04:187,12,0	0/0:12,0:25:21.07:0,21,342	0/1:27,1:28:4.66:5,0,776	0/0:24,0:24:33.06:0,33,592	0/0:23,0:23:54.09:0,54,895
chr10_random	152529	.	AAGAT	A	5317.24	PASS	AB=0.871;AC=40;AF=0.769;AN=52;BaseQRankSum=0.638;DP=702;FS=11.217;HRun=0;HaplotypeScore=130.3056;InbreedingCoeff=0.4229;MQ=61.60;MQ0=8;MQRankSum=2.344;QD=9.51;ReadPosRankSum=-0.374;VQSLOD=3.2790;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	0/0:26,0:25:43.66:0,44,834	1/1:5,4:9:2.93:46,3,0	./.	./.	0/0:38,0:37:9.75:0,10,348	1/1:13,18:31:6.02:93,6,0	1/1:16,0:14:2.97:20,3,0	0/1:47,0:44:8.01:49,0,8	0/0:26,0:26:39.07:0,39,584	1/1:11,22:32:63.13:816,63,0	1/1:10,15:25:12.04:183,12,0	0/1:20,0:20:3.10:3,0,665	1/1:18,19:37:12.04:184,12,0	1/1:16,29:45:21.07:325,21,0	1/1:26,0:26:27.04:331,27,0	1/1:10,13:23:3.01:46,3,0	1/1:17,2:19:26.96:378,27,0	1/1:11,2:12:12.68:239,13,0	1/1:12,8:19:24.08:365,24,0	1/1:15,13:28:17.78:169,18,0	1/1:10,8:18:3.01:46,3,0	0/0:21,0:21:42.12:0,42,801	1/1:10,17:27:2.80:46,3,0	0/1:21,4:25:24.39:353,0,24	0/1:11,17:28:23.41:301,0,23	1/1:10,21:31:60.02:771,60,0	1/1:27,0:27:33.11:505,33,0	1/1:0,11:11:3.01:47,3,0
chr10_random	152587	.	GATAC	G	2213.58	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.784;DP=728;FS=1.817;HRun=0;HaplotypeScore=137.3061;InbreedingCoeff=0.9173;MQ=56.53;MQ0=13;MQRankSum=3.933;QD=19.94;ReadPosRankSum=1.247;VQSLOD=3.6523;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	1/1:23,0:22:21.07:322,21,0	0/0:8,0:8:12.03:0,12,195	0/0:23,0:4:9.03:0,9,141	0/0:16,0:2:6.02:0,6,90	1/1:38,7:44:62.96:956,63,0	0/0:27,0:27:33.06:0,33,570	0/0:18,0:17:24.04:0,24,446	0/0:49,0:49:44.55:0,45,1286	1/1:21,3:24:33.11:526,33,0	0/0:40,0:38:81.18:0,81,1573	0/0:24,0:24:45.10:0,45,906	0/0:23,0:23:51.16:0,51,1011	0/0:32,0:32:51.14:0,51,1047	0/0:39,0:39:48.15:0,48,1026	0/0:31,0:31:78.22:0,78,1506	0/0:19,0:19:30.09:0,30,658	1/1:18,1:19:36.12:568,36,0	0/0:21,0:19:42.14:0,42,848	0/0:24,0:21:27.03:0,27,512	0/0:26,0:26:63.21:0,63,1335	0/0:15,0:15:24.08:0,24,539	0/0:24,0:24:51.17:0,51,1117	0/0:31,0:31:54.19:0,54,1183	0/0:13,0:13:5.74:0,6,49	0/0:29,0:29:39.12:0,39,850	0/0:36,0:36:38.93:0,39,1485	0/0:26,0:26:54.19:0,54,1204	0/0:23,0:22:45.15:0,45,879
chr10_random	156222	.	AATAG	A	1107.57	PASS	AB=1.000;AC=12;AF=0.231;AN=52;BaseQRankSum=5.126;DP=605;FS=5.224;HRun=0;HaplotypeScore=102.4143;InbreedingCoeff=0.6460;MQ=66.97;MQ0=1;MQRankSum=-0.200;QD=7.91;ReadPosRankSum=-0.525;VQSLOD=1.9981;culprit=HaplotypeScore;set=inputR	GT:AD:DP:GQ:PL	0/0:26,0:26:30.10:0,30,620	0/0:13,0:13:33.10:0,33,632	./.	./.	0/0:31,0:31:54.19:0,54,1192	1/1:15,9:24:15.05:229,15,0	0/1:16,0:16:39.90:79,0,40	0/0:38,0:38:0:0,0,0	0/0:8,0:19:12.04:0,12,209	0/0:23,0:23:45.15:0,45,823	0/0:9,0:17:2.66:0,3,52	0/0:20,0:20:24.08:0,24,557	0/0:23,0:23:33.10:0,33,637	0/0:36,1:37:17.33:0,17,1235	0/0:23,0:23:39.10:0,39,758	0/0:13,0:25:3.01:0,3,50	0/1:20,0:20:21.82:22,0,383	0/0:14,0:20:18.06:0,18,309	1/1:21,3:23:9.02:118,9,0	0/0:24,0:24:45.14:0,45,928	1/1:7,12:19:21.07:321,21,0	0/0:17,0:17:24.07:0,24,481	0/0:22,1:23:5.29:0,5,990	0/0:10,0:10:15.05:0,15,326	0/0:18,0:18:30.10:0,30,651	0/0:24,0:28:39.11:0,39,724	1/1:6,11:17:21.07:321,21,0	1/1:6,14:20:12.04:184,12,0
chr10_random	158310	.	T	TAC	509.42	PASS	AB=0.850;AC=8;AF=0.154;AN=52;BaseQRankSum=0.651;DP=639;FS=9.760;HRun=0;HaplotypeScore=102.0317;InbreedingCoeff=0.3540;MQ=63.57;MQ0=2;MQRankSum=1.475;QD=4.72;ReadPosRankSum=-0.726;VQSLOD=1.9759;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	1/1:26,1:27:18.36:162,18,0	0/1:11,0:11:13.93:14,0,57	./.	./.	0/0:21,0:24:49.64:0,50,478	0/0:33,1:33:11.16:0,11,488	0/0:18,0:18:20.93:0,21,205	0/0:25,0:25:17.71:0,18,186	0/1:10,2:13:57.41:57,0,246	0/0:29,0:29:15.48:0,15,322	0/0:26,0:27:50.80:0,51,523	0/0:24,0:25:47.96:0,48,510	0/0:32,1:34:30.02:0,30,721	0/0:30,0:30:51.14:0,51,562	0/0:36,0:36:75.16:0,75,802	0/0:23,0:24:56.96:0,57,595	1/1:6,0:12:9.02:100,9,0	0/0:10,0:12:14.87:0,15,147	0/0:18,0:20:23.73:0,24,227	0/1:13,16:29:30.41:289,0,30	0/1:14,2:16:27.13:27,0,148	0/0:23,0:21:20.03:0,20,257	0/0:21,0:21:9.09:0,9,157	0/0:19,0:19:43.36:0,43,465	0/0:21,0:22:19.68:0,20,308	0/0:25,0:25:10.09:0,10,266	0/0:20,0:20:33.05:0,33,344	0/0:14,0:14:21.06:0,21,232
chr10_random	161070	.	C	CT	572.14	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.467;DP=609;FS=5.748;HRun=10;HaplotypeScore=62.1036;InbreedingCoeff=0.5988;MQ=69.51;MQ0=0;MQRankSum=-1.756;QD=11.92;ReadPosRankSum=-2.532;VQSLOD=2.5875;culprit=HaplotypeScore;set=inputR	GT:AD:DP:GQ:PL	1/1:13,18:31:66.06:664,66,0	0/0:7,0:7:20.97:0,21,172	0/0:14,0:11:22.16:0,22,140	0/1:16,0:13:10.54:11,0,85	0/0:35,0:34:83.82:0,84,688	0/0:17,0:17:44.92:0,45,369	0/0:13,0:13:26.97:0,27,222	0/0:40,1:42:59.90:0,60,683	0/0:17,0:17:47.93:0,48,394	0/0:20,0:20:53.92:0,54,443	0/0:21,0:21:44.41:0,44,354	0/0:27,0:27:68.88:0,69,566	0/0:14,0:16:43.03:0,43,332	0/0:29,0:29:59.87:0,60,492	0/0:20,0:21:49.94:0,50,397	0/0:27,0:27:68.90:0,69,567	0/0:32,0:32:83.88:0,84,687	0/0:7,0:7:20.98:0,21,172	0/0:19,1:20:18.93:0,19,358	0/0:32,2:35:18.88:0,19,552	0/0:9,0:10:23.01:0,23,178	0/0:19,0:19:31.24:0,31,374	0/0:22,0:22:6.63:0,7,326	0/0:26,0:26:56.89:0,57,468	0/0:25,0:25:40.22:0,40,534	0/0:21,0:21:41.88:0,42,344	0/0:28,0:27:65.88:0,66,542	0/0:9,0:9:11.68:0,12,93
chr10_random	161549	.	G	GA	389.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.275;DP=479;FS=0.000;HRun=8;HaplotypeScore=50.2049;InbreedingCoeff=0.9386;MQ=80.09;MQ0=0;MQRankSum=0.696;QD=21.66;ReadPosRankSum=-1.742;VQSLOD=3.1081;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	0/0:9,0:9:24.01:0,24,220	0/0:4,0:4:12.01:0,12,110	0/0:33,0:23:29.95:0,30,253	0/0:20,0:17:13.74:0,14,142	0/0:24,0:24:65.89:0,66,586	0/0:14,0:14:39:0,39,352	0/0:11,0:11:26.96:0,27,234	0/0:26,0:26:69.02:0,69,627	0/0:16,0:16:42.01:0,42,383	0/0:19,0:19:48.02:0,48,439	0/0:26,0:26:40.58:0,41,537	0/0:12,0:12:30.01:0,30,273	0/0:18,0:18:51.03:0,51,466	0/0:17,0:17:39.02:0,39,357	0/0:18,0:18:34.17:0,34,447	0/0:13,0:13:39:0,39,352	1/1:3,15:18:42.12:485,42,0	0/0:18,0:18:36.01:0,36,330	0/0:9,0:9:24.01:0,24,220	0/0:30,1:31:55.43:0,55,761	0/0:11,0:11:30.02:0,30,275	0/0:12,0:12:29.92:0,30,258	0/0:20,0:20:48.01:0,48,435	0/0:7,0:7:21:0,21,187	0/0:16,0:16:33:0,33,298	0/0:16,0:16:45.02:0,45,412	0/0:32,0:32:87:0,87,786	0/0:9,0:9:27.01:0,27,247
chr10_random	163470	.	A	AATT	465.64	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.696;DP=634;FS=32.658;HRun=0;HaplotypeScore=94.3185;InbreedingCoeff=0.9844;MQ=78.53;MQ0=0;MQRankSum=-5.932;QD=25.87;ReadPosRankSum=-6.275;VQSLOD=0.7046;culprit=ReadPosRankSum;set=inputR	GT:AD:DP:GQ:PL	1/1:4,14:18:44.66:560,45,0	0/0:5,0:5:15.05:0,15,279	0/0:33,0:32:96.07:0,96,1555	0/0:30,0:27:68.48:0,68,1259	0/0:22,0:22:66.21:0,66,1172	0/0:26,0:26:78.25:0,78,1421	0/0:17,0:17:51.17:0,51,950	0/0:29,0:29:87.25:0,87,1497	0/0:20,0:20:60.21:0,60,1116	0/0:21,0:21:63.22:0,63,1172	0/0:23,0:23:66.21:0,66,1198	0/0:15,0:15:42.14:0,42,777	0/0:20,0:20:60.15:0,60,1022	0/0:16,0:16:48.16:0,48,887	0/0:18,0:18:54.17:0,54,975	0/0:14,0:14:42.14:0,42,782	0/0:38,0:38:99:0,114,2101	0/0:27,0:27:81.28:0,81,1491	0/0:16,0:16:48.15:0,48,857	0/0:34,0:34:99:0,99,1802	0/0:29,0:29:84.29:0,84,1565	0/0:26,0:26:75.26:0,75,1395	0/0:22,0:22:66.21:0,66,1193	0/0:26,0:26:75.23:0,75,1346	0/0:20,0:20:60.17:0,60,1035	0/0:29,0:29:87.28:0,87,1553	0/0:21,0:21:63.22:0,63,1174	0/0:19,0:18:57.20:0,57,1056
chr10_random	163471	.	C	CT	199.86	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.964;DP=637;FS=44.382;HRun=0;HaplotypeScore=71.3369;InbreedingCoeff=0.9844;MQ=77.82;MQ0=0;MQRankSum=-5.744;QD=11.10;ReadPosRankSum=-6.937;VQSLOD=0.9597;culprit=ReadPosRankSum;set=inputR	GT:AD:DP:GQ:PL	1/1:3,14:18:44.44:295,44,0	0/0:6,0:6:15.05:0,15,210	0/0:32,0:31:93.26:0,93,1235	0/0:30,0:27:65.72:0,66,958	0/0:22,0:22:66.22:0,66,922	0/0:26,0:26:75.25:0,75,1049	0/0:18,0:18:51.17:0,51,713	0/0:28,0:28:84.28:0,84,1171	0/0:21,0:21:60.20:0,60,838	0/0:21,0:21:63.21:0,63,881	0/0:24,0:24:69.22:0,69,946	0/0:16,0:16:42.14:0,42,587	0/0:18,0:18:54.18:0,54,754	0/0:16,0:16:48.15:0,48,653	0/0:19,0:19:54.18:0,54,755	0/0:14,0:14:42.14:0,42,587	0/0:38,0:38:99:0,114,1576	0/0:27,0:27:81.23:0,81,1110	0/0:16,0:16:48.15:0,48,654	0/0:35,0:35:99:0,102,1407	0/0:29,0:29:84.28:0,84,1175	0/0:26,0:26:75.25:0,75,1047	0/0:22,0:22:66.21:0,66,902	0/0:26,0:26:75.21:0,75,1027	0/0:20,0:20:54.18:0,54,742	0/0:29,0:29:84.26:0,84,1153	0/0:21,0:21:63.21:0,63,881	0/0:19,0:18:57.14:0,57,774
chr10_random	164737	.	A	ATG	1301.07	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-0.517;DP=718;FS=14.697;HRun=0;HaplotypeScore=114.7079;InbreedingCoeff=0.7301;MQ=62.07;MQ0=8;MQRankSum=-1.388;QD=7.39;ReadPosRankSum=-1.154;VQSLOD=2.0679;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	1/1:32,0:31:8.88:88,9,0	0/0:8,0:9:14.87:0,15,152	0/0:36,0:18:2.82:0,3,34	0/0:39,0:22:12.48:0,12,97	0/0:35,0:33:0.40:0,0,1	0/0:24,0:25:41.54:0,42,436	0/0:26,0:27:38.90:0,39,396	0/0:16,0:19:20.37:0,20,199	1/1:7,0:30:8.22:60,8,0	0/0:17,0:17:33.97:0,34,349	0/0:25,0:27:3.67:0,4,418	0/0:21,0:21:28.54:0,29,435	1/1:14,19:34:16.51:708,17,0	0/0:21,0:21:26.91:0,27,289	0/0:28,0:30:65.57:0,66,682	1/1:14,15:29:0.43:435,0,0	1/1:32,0:32:23.97:161,24,0	0/0:15,0:15:30.08:0,30,340	0/1:18,0:18:2.69:3,0,88	0/0:21,0:23:41.77:0,42,427	0/0:29,0:30:47.74:0,48,485	0/0:16,0:16:24.05:0,24,266	0/0:15,0:15:26.93:0,27,281	0/0:47,0:48:80.75:0,81,921	0/0:23,0:26:56.81:0,57,599	0/0:24,0:24:42.06:0,42,477	0/0:15,0:15:36.10:0,36,414	0/0:21,0:23:50.97:0,51,565
chr10_random	172708	.	T	TTA	917.43	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.174;DP=552;FS=5.974;HRun=0;HaplotypeScore=60.2133;InbreedingCoeff=0.7963;MQ=62.47;MQ0=0;MQRankSum=0.221;QD=33.98;ReadPosRankSum=0.104;VQSLOD=5.6395;culprit=HaplotypeScore;set=inputR	GT:AD:DP:GQ:PL	0/0:18,0:18:54.15:0,54,673	0/0:6,0:6:12.04:0,12,154	0/0:6,0:6:12.04:0,12,148	0/0:3,0:3:3.01:0,3,39	0/0:34,0:34:90.29:0,90,1158	0/0:26,0:26:69.19:0,69,859	0/0:14,0:14:36.12:0,36,463	0/0:29,0:29:57.18:0,57,734	0/0:19,0:19:51.17:0,51,656	0/0:26,0:25:75.24:0,75,965	0/0:23,0:23:48.15:0,48,615	0/0:15,0:15:33.11:0,33,424	0/0:20,0:20:51.17:0,51,656	0/0:28,0:28:75.19:0,75,932	0/0:27,0:27:69.21:0,69,874	0/0:24,0:23:66.21:0,66,849	1/1:5,22:27:60.21:1012,60,0	0/0:6,0:6:18.06:0,18,231	0/0:17,0:17:42.14:0,42,539	0/0:33,0:33:81.24:0,81,1026	0/0:14,0:14:39.13:0,39,501	0/0:14,0:14:36.12:0,36,463	0/0:21,0:21:57.18:0,57,734	0/0:8,0:8:18.04:0,18,218	0/0:26,0:26:66.19:0,66,833	0/0:28,0:28:78.25:0,78,1004	0/0:26,0:26:66.20:0,66,834	0/0:14,0:14:36.12:0,36,463
chr10_random	173173	.	GAATACA	G	790.29	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.668;DP=450;FS=0.000;HRun=0;HaplotypeScore=90.7535;InbreedingCoeff=0.9653;MQ=64.27;MQ0=1;MQRankSum=-6.083;QD=43.91;ReadPosRankSum=1.159;VQSLOD=3.5425;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	1/1:3,9:12:21.07:489,21,0	0/0:9,0:9:21.07:0,21,681	0/0:9,0:9:24.08:0,24,703	0/0:12,0:12:29.97:0,30,709	0/0:27,0:27:75.26:0,75,2493	0/0:27,0:27:81.28:0,81,2643	0/0:16,0:16:39.13:0,39,1304	0/0:33,0:33:99:0,99,3299	1/1:0,6:6:18.06:419,18,0	0/0:19,0:19:57.20:0,57,1967	0/0:16,0:16:45.14:0,45,1508	0/0:17,0:17:51.16:0,51,1535	0/0:9,0:9:27.09:0,27,954	0/0:11,0:11:27.09:0,27,903	0/0:23,0:23:66.23:0,66,2296	0/0:16,0:16:48.16:0,48,1589	0/0:18,0:18:54.16:0,54,1710	0/0:10,0:10:27.09:0,27,951	0/0:18,0:18:51.17:0,51,1694	0/0:20,0:20:57.18:0,57,1925	0/0:14,0:13:39.13:0,39,1320	0/0:4,0:4:12.03:0,12,343	0/0:22,0:22:66.23:0,66,2313	0/0:5,0:5:15.05:0,15,515	0/0:19,0:19:54.19:0,54,1837	0/0:18,0:18:54.19:0,54,1871	0/0:27,0:26:78.25:0,78,2627	0/0:13,0:13:39.13:0,39,1377
chr10_random	173319	.	G	GT	448.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.426;DP=441;FS=13.836;HRun=7;HaplotypeScore=43.9730;InbreedingCoeff=0.7833;MQ=76.30;MQ0=0;MQRankSum=-0.769;QD=28.05;ReadPosRankSum=0.538;VQSLOD=2.8928;culprit=HaplotypeScore;set=inputR	GT:AD:DP:GQ:PL	0/0:14,0:14:33.02:0,33,311	0/0:11,0:11:30.04:0,30,290	0/0:11,0:11:19.89:0,20,200	0/0:14,0:13:24.48:0,24,224	0/0:21,0:21:51.01:0,51,477	0/0:17,0:17:48.08:0,48,463	0/0:15,0:15:45.04:0,45,422	0/0:42,0:42:92.92:0,93,877	0/0:8,0:8:24.04:0,24,231	0/0:21,0:21:54.06:0,54,513	0/0:21,0:21:54.09:0,54,521	0/0:16,0:16:42.06:0,42,406	0/0:14,0:14:39.06:0,39,377	0/0:13,0:13:30.05:0,30,290	0/0:18,0:18:51.08:0,51,492	0/0:13,0:13:36.05:0,36,342	1/1:1,15:16:45.14:544,45,0	0/0:9,0:9:2.12:0,2,181	0/0:10,0:10:30.05:0,30,290	0/0:25,0:25:72.09:0,72,684	0/0:9,0:9:24.02:0,24,226	0/0:3,0:3:9.01:0,9,87	0/0:16,0:16:45.07:0,45,434	0/0:8,0:8:24.04:0,24,232	0/0:21,0:21:60.07:0,60,572	0/0:18,0:18:45.07:0,45,434	0/0:25,0:25:66.11:0,66,637	0/0:12,0:12:36.06:0,36,348
chr10_random	174233	.	GTATATATA	G	1356.07	PASS	AB=0.553;AC=5;AF=0.093;AN=54;BaseQRankSum=7.492;DP=327;FS=0.757;HRun=0;HaplotypeScore=90.4631;InbreedingCoeff=0.6762;MQ=73.92;MQ0=2;MQRankSum=-7.383;QD=21.52;ReadPosRankSum=1.927;VQSLOD=2.9672;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	1/1:9,5:14:18.05:412,18,0	0/0:7,0:7:15.05:0,15,610	./.	0/0:13,0:7:6.49:0,6,87	0/1:5,1:26:3.95:195,0,4	0/0:16,0:16:39.13:0,39,1437	0/0:6,0:6:12.02:0,12,345	0/0:27,0:30:63.21:0,63,2271	1/1:5,18:23:33.11:876,33,0	0/0:12,0:13:30.10:0,30,1217	0/0:10,0:11:24.08:0,24,665	0/0:2,0:2:3.01:0,3,50	0/0:8,0:9:18.06:0,18,705	0/0:6,0:8:18.04:0,18,539	0/0:7,0:7:12.04:0,12,453	0/0:11,0:11:24.08:0,24,968	0/0:26,0:26:66.21:0,66,2453	0/0:9,0:9:24.08:0,24,1021	0/0:6,0:9:18.06:0,18,649	0/0:10,0:10:21.07:0,21,873	0/0:4,0:4:12.04:0,12,472	0/0:7,0:7:9.02:0,9,281	0/0:4,0:6:9.03:0,9,311	0/0:4,0:4:12.04:0,12,456	0/0:16,0:17:45.14:0,45,1681	0/0:8,0:9:21.07:0,21,809	0/0:7,0:7:21.05:0,21,777	0/0:13,0:13:39.12:0,39,1472
chr10_random	174341	.	GCA	G	442.64	PASS	AB=0.923;AC=3;AF=0.054;AN=56;BaseQRankSum=6.051;DP=616;FS=4.341;HRun=0;HaplotypeScore=78.1689;InbreedingCoeff=0.5190;MQ=60.24;MQ0=1;MQRankSum=-0.241;QD=11.07;ReadPosRankSum=1.108;VQSLOD=2.7350;culprit=HaplotypeScore;set=inputR	GT:AD:DP:GQ:PL	1/1:10,18:28:44.17:535,44,0	0/0:9,0:9:24.05:0,24,344	0/0:31,0:20:25.61:0,26,439	0/0:37,0:33:59.29:0,59,914	0/0:30,0:30:81.25:0,81,1297	0/0:20,2:22:16.33:0,16,803	0/0:13,0:13:36.12:0,36,598	0/0:30,1:31:32.95:0,33,964	0/0:23,0:23:53.51:0,54,805	0/0:24,0:24:60.13:0,60,878	0/0:23,0:23:24.84:0,25,810	0/0:19,1:20:4.28:0,4,597	0/0:23,1:24:0.54:0,1,804	0/0:14,0:14:36.08:0,36,546	0/0:11,0:11:27.08:0,27,423	0/0:14,0:14:36.07:0,36,522	0/0:21,0:21:45.06:0,45,665	0/0:18,0:18:33.43:0,33,480	0/0:15,0:15:38.94:0,39,502	0/0:20,0:20:54.14:0,54,816	0/0:48,0:48:99:0,123,1950	0/1:11,1:12:7.78:8,0,392	0/0:21,0:21:57.19:0,57,943	0/0:35,0:35:93.30:0,93,1514	0/0:13,0:13:36.11:0,36,571	0/0:15,0:15:42.13:0,42,674	0/0:25,0:25:60.17:0,60,936	0/0:18,0:18:53.95:0,54,711
chr10_random	174876	.	CT	C	1462.26	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.990;DP=763;FS=12.817;HRun=2;HaplotypeScore=74.7609;InbreedingCoeff=0.9989;MQ=83.55;MQ0=0;MQRankSum=-5.047;QD=33.23;ReadPosRankSum=1.741;VQSLOD=2.6606;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	1/1:0,44:44:99:1557,120,0	0/0:16,0:16:42.13:0,42,610	0/0:23,0:23:62.42:0,62,880	0/0:21,0:21:60.63:0,61,851	0/0:24,0:24:72.24:0,72,1078	0/0:25,0:25:75.24:0,75,1103	0/0:27,0:27:81.22:0,81,1129	0/0:44,0:43:99:0,126,1821	0/0:28,0:28:78.24:0,78,1128	0/0:31,0:31:93.28:0,93,1310	0/0:26,0:26:78.26:0,78,1168	0/0:31,0:31:93.30:0,93,1371	0/0:29,0:29:87.28:0,87,1281	0/0:36,0:36:99:0,108,1591	0/0:30,0:30:90.29:0,90,1328	0/0:35,0:35:99:0,102,1449	0/0:26,0:26:78.24:0,78,1129	0/0:10,0:10:27.05:0,27,374	0/0:18,0:18:48.05:0,48,690	0/0:27,0:27:78.24:0,78,1130	0/0:32,0:32:96.33:0,96,1435	0/0:27,0:27:75.25:0,75,1106	0/0:24,0:24:72.19:0,72,1033	0/0:27,0:27:81.25:0,81,1170	0/0:27,0:27:81.27:0,81,1212	0/0:31,0:31:93.30:0,93,1358	0/0:31,0:31:90.27:0,90,1305	0/0:13,0:13:39.13:0,39,584
chr10_random	175840	.	AGTGTGTGTGTGTGTGTGT	A	166.68	PASS	AB=0.636;AC=3;AF=0.054;AN=56;BaseQRankSum=4.022;DP=644;FS=7.214;HRun=0;HaplotypeScore=255.2099;InbreedingCoeff=0.3952;MQ=66.27;MQ0=28;MQRankSum=-3.974;QD=3.21;ReadPosRankSum=-0.687;VQSLOD=1.6561;culprit=QD;set=inputR	GT:AD:DP:GQ:PL	1/1:19,12:31:6.02:218,6,0	0/0:6,0:6:9.03:0,9,696	0/0:56,0:21:3.01:0,3,42	0/0:56,0:20:5.97:0,6,51	0/0:24,0:25:39.06:0,39,1269	0/0:19,0:17:30.10:0,30,1799	0/0:26,0:27:49.69:0,50,2523	0/0:31,0:31:26.99:0,27,554	0/1:9,0:20:31.16:43,0,31	0/0:11,0:11:26.10:0,26,1051	0/0:14,0:15:27.07:0,27,1459	0/0:20,0:21:40.63:0,41,1938	0/0:15,0:16:27.07:0,27,1698	0/0:25,0:28:54.14:0,54,3251	0/0:25,0:30:57.15:0,57,3160	0/0:18,0:18:42.10:0,42,2372	0/0:23,0:24:39.06:0,39,2144	0/0:7,0:7:18.01:0,18,1109	0/0:12,0:12:6.64:0,7,245	0/0:17,0:22:24.05:0,24,1374	0/0:27,0:27:27.07:0,27,1666	0/0:24,0:24:42.11:0,42,2267	0/0:13,0:13:27.08:0,27,1250	0/0:27,0:26:38.77:0,39,1863	0/0:25,0:24:31.29:0,31,1102	0/0:17,0:17:33.08:0,33,884	0/0:14,0:19:18.30:0,18,635	0/0:12,0:9:21.07:0,21,1336
chr10_random	177266	.	G	GA	358.18	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.633;DP=633;FS=9.949;HRun=6;HaplotypeScore=62.9721;InbreedingCoeff=0.9212;MQ=79.48;MQ0=0;MQRankSum=-0.769;QD=23.88;ReadPosRankSum=1.636;VQSLOD=2.8548;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,141,1437	0/0:11,0:11:33.08:0,33,337	0/0:25,0:25:34.15:0,34,414	0/0:14,0:14:27.06:0,27,274	0/0:19,0:19:48.08:0,48,481	0/0:32,0:32:87.20:0,87,887	0/0:21,0:21:57.13:0,57,582	0/0:30,0:30:90.19:0,90,910	1/1:1,14:15:36.12:453,36,0	0/0:23,0:23:63.14:0,63,643	0/0:20,0:20:51.11:0,51,520	0/0:34,0:34:99:0,102,1039	0/0:16,0:16:45.10:0,45,459	0/0:22,0:22:63.14:0,63,642	0/0:20,0:20:51.11:0,51,520	0/0:15,1:16:7.36:0,7,391	0/0:22,0:22:54.12:0,54,551	0/0:30,0:30:81.14:0,81,815	0/0:25,0:24:60.13:0,60,612	0/0:30,0:30:81.18:0,81,826	0/0:30,0:30:75.15:0,75,758	0/0:14,0:14:24.03:0,24,238	0/0:13,0:13:30.06:0,30,306	0/0:29,0:29:84.19:0,84,857	0/0:15,0:15:42.09:0,42,428	0/0:17,0:17:45.09:0,45,455	0/0:11,0:11:33.06:0,33,329	0/0:18,0:18:51.11:0,51,518
chr10_random	177960	.	CCCTG	C	520.89	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.207;DP=624;FS=0.000;HRun=0;HaplotypeScore=95.3840;InbreedingCoeff=0.9987;MQ=65.81;MQ0=0;MQRankSum=-0.320;QD=27.42;ReadPosRankSum=-0.735;VQSLOD=2.9667;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	0/0:25,0:25:72.25:0,72,1918	0/0:11,0:11:33.11:0,33,850	0/0:26,0:25:75.21:0,75,1810	0/0:28,0:25:69.22:0,69,1685	0/0:32,0:32:90.27:0,90,2276	0/0:24,0:24:66.23:0,66,1751	0/0:13,0:13:36.12:0,36,960	0/0:32,0:32:87.29:0,87,2213	1/1:0,19:16:33.02:616,33,0	0/0:26,0:26:72.25:0,72,1904	0/0:22,0:22:66.23:0,66,1726	0/0:10,0:10:30.10:0,30,800	0/0:27,0:27:75.26:0,75,1967	0/0:21,0:21:63.22:0,63,1650	0/0:22,0:22:60.21:0,60,1571	0/0:22,0:22:66.23:0,66,1761	0/0:26,0:26:75.26:0,75,1987	0/0:17,0:17:51.17:0,51,1287	0/0:22,0:22:60.21:0,60,1514	0/0:28,0:28:84.29:0,84,2192	0/0:23,0:23:66.20:0,66,1673	0/0:18,0:18:54.17:0,54,1354	0/0:23,0:23:63.22:0,63,1642	0/0:23,0:23:69.24:0,69,1748	0/0:26,0:26:69.24:0,69,1840	0/0:30,0:30:84.29:0,84,2212	0/0:16,0:15:48.16:0,48,1280	0/0:12,0:12:36.12:0,36,958
chr10_random	181481	.	A	AGGGTT	2024.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.939;DP=729;FS=2.723;HRun=0;HaplotypeScore=130.8097;InbreedingCoeff=0.9958;MQ=82.68;MQ0=0;MQRankSum=-6.696;QD=67.49;ReadPosRankSum=0.587;VQSLOD=4.9938;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	0/0:34,0:34:98.37:0,98,2124	0/0:18,0:18:48.16:0,48,1070	0/0:23,0:23:69.22:0,69,1426	0/0:19,0:19:54.15:0,54,1049	0/0:37,0:37:99:0,108,2289	0/0:25,0:25:72.22:0,72,1503	0/0:14,0:14:42.14:0,42,937	0/0:32,0:32:90.24:0,90,1701	1/1:6,23:30:69.24:2120,69,0	0/0:33,0:33:99:0,99,2140	0/0:23,0:23:66.23:0,66,1453	0/0:22,0:22:66.20:0,66,1424	0/0:23,0:23:69.21:0,69,1454	0/0:29,0:29:87.24:0,87,1810	0/0:40,0:40:99:0,117,2562	0/0:28,0:28:81.28:0,81,1739	0/0:17,0:17:45.15:0,45,1003	0/0:7,0:7:21.04:0,21,423	0/0:20,0:20:57.19:0,57,1182	0/0:37,0:37:99:0,111,2306	0/0:21,0:21:60.21:0,60,1303	0/0:27,0:27:81.17:0,81,1677	0/0:29,0:29:84.29:0,84,1855	0/0:36,0:36:99:0,108,2272	0/0:24,0:24:72.25:0,72,1586	0/0:34,0:34:99:0,102,2180	0/0:33,0:33:99:0,99,2121	0/0:14,0:14:39.13:0,39,865
chr10_random	183333	.	TG	T	723.33	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.796;DP=777;FS=4.039;HRun=3;HaplotypeScore=72.8463;InbreedingCoeff=0.9840;MQ=83.55;MQ0=0;MQRankSum=-2.290;QD=30.14;ReadPosRankSum=2.319;VQSLOD=3.6626;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	0/0:26,0:26:75.25:0,75,1080	0/0:19,0:19:54.18:0,54,769	0/0:26,0:26:74.16:0,74,927	0/0:19,0:19:57.16:0,57,799	0/0:31,0:31:87.29:0,87,1252	0/0:28,0:28:84.28:0,84,1208	0/0:17,0:17:51.17:0,51,735	0/0:34,0:34:99:0,102,1421	1/1:1,23:24:66.21:818,66,0	0/0:32,0:32:93.31:0,93,1339	0/0:33,0:33:93.31:0,93,1339	0/0:23,0:23:63.21:0,63,907	0/0:49,0:49:99:0,144,2073	0/0:43,0:43:99:0,126,1813	0/0:39,0:39:99:0,117,1685	0/0:32,0:32:93.30:0,93,1322	0/0:17,0:17:51.16:0,51,715	0/0:12,0:12:30.10:0,30,428	0/0:18,0:18:48.16:0,48,685	0/0:37,0:37:99:0,111,1592	0/0:18,0:18:54.16:0,54,758	0/0:28,0:28:81.27:0,81,1166	0/0:32,0:32:87.28:0,87,1228	0/0:27,0:27:81.27:0,81,1167	0/0:35,0:35:99:0,99,1408	0/0:27,0:27:75.23:0,75,1037	0/0:46,0:45:99:0,132,1878	0/0:5,0:5:15.05:0,15,214
chr10_random	184536	.	C	CCTCT	546.51	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=4.704;DP=752;FS=1.397;HRun=0;HaplotypeScore=111.6103;InbreedingCoeff=0.9348;MQ=53.10;MQ0=29;MQRankSum=-4.617;QD=49.68;ReadPosRankSum=1.345;VQSLOD=4.1940;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	0/0:43,0:41:99:0,105,2082	0/0:14,0:14:42.06:0,42,759	./.	0/0:20,0:6:8.96:0,9,162	0/0:32,0:31:63.13:0,63,1250	0/0:32,0:31:72.25:0,72,1438	0/0:30,0:23:44.93:0,45,897	0/0:29,0:11:30.10:0,30,596	1/1:3,8:10:24.08:640,24,0	0/0:35,0:34:96.33:0,96,1909	0/0:27,0:24:63.13:0,63,1252	0/0:29,0:29:72.21:0,72,1344	0/0:29,0:29:72.12:0,72,1427	0/0:27,0:27:63.22:0,63,1216	0/0:29,0:29:78.27:0,78,1558	0/0:26,0:25:60.19:0,60,1164	0/0:32,0:31:93.32:0,93,1846	0/0:14,0:14:39.13:0,39,779	0/0:30,0:25:72.23:0,72,1371	0/0:36,0:35:87.21:0,87,1654	0/0:35,0:35:87.28:0,87,1696	0/0:28,0:25:54.17:0,54,1033	0/0:22,0:18:45.15:0,45,898	0/0:36,0:36:84.29:0,84,1668	0/0:23,0:20:45.15:0,45,875	0/0:31,0:27:78.26:0,78,1526	0/0:36,0:36:63.18:0,63,1185	0/0:6,0:6:18.06:0,18,359
chr10_random	184539	.	G	GCCT	381.27	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=4.416;DP=760;FS=3.461;HRun=0;HaplotypeScore=102.2834;InbreedingCoeff=0.9708;MQ=54.05;MQ0=27;MQRankSum=-4.293;QD=42.36;ReadPosRankSum=1.263;VQSLOD=5.2351;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	0/0:47,0:45:99:0,114,2018	0/0:14,0:14:36.12:0,36,670	./.	0/0:23,0:7:14.65:0,15,212	0/0:31,0:30:63.22:0,63,1174	0/0:33,0:32:77.83:0,78,1413	0/0:29,0:22:45.15:0,45,839	0/0:28,0:11:33.11:0,33,610	1/1:1,8:8:21.07:473,21,0	0/0:37,0:36:99:0,105,1946	0/0:28,0:25:63.22:0,63,1173	0/0:28,0:28:69.22:0,69,1248	0/0:29,0:29:71.83:0,72,1342	0/0:27,0:27:63.17:0,63,1117	0/0:29,0:29:81.26:0,81,1479	0/0:25,0:24:60.21:0,60,1112	0/0:35,0:34:99:0,99,1747	0/0:15,0:15:39.13:0,39,727	0/0:29,0:24:69.24:0,69,1287	0/0:38,0:37:93.27:0,93,1665	0/0:35,0:35:87.30:0,87,1621	0/0:28,0:25:51.17:0,51,950	0/0:21,0:18:45.15:0,45,830	0/0:37,0:37:87.28:0,87,1591	0/0:24,0:21:48.13:0,48,855	0/0:32,0:28:84.28:0,84,1532	0/0:32,0:32:60.68:0,61,1095	0/0:7,0:7:18.03:0,18,302
chr10_random	186217	.	TTTTATAGGGCC	T	1721.68	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.752;DP=602;FS=2.065;HRun=0;HaplotypeScore=187.4020;InbreedingCoeff=0.9449;MQ=88.45;MQ0=0;MQRankSum=-7.008;QD=86.08;ReadPosRankSum=2.049;VQSLOD=3.9076;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,5394	0/0:11,0:11:33.11:0,33,1799	0/0:24,0:24:69.22:0,69,3341	0/0:21,0:21:57.20:0,57,2759	0/0:28,0:28:75.22:0,75,3614	0/0:24,0:24:72.25:0,72,3694	0/0:15,0:15:45.15:0,45,2405	0/0:39,0:39:99:0,114,5645	1/1:2,18:20:51.17:1817,51,0	0/0:33,0:33:90.30:0,90,4634	0/0:20,0:20:60.21:0,60,3170	0/0:21,0:21:63.22:0,63,3326	0/0:25,0:25:68.75:0,69,3779	0/0:27,0:27:81.28:0,81,4259	0/0:13,0:13:39.11:0,39,1955	0/0:21,0:21:63.22:0,63,3369	0/0:29,0:29:81.28:0,81,4366	0/0:18,0:18:51.17:0,51,2806	0/0:16,0:16:48.16:0,48,2492	0/0:18,0:18:54.19:0,54,2951	0/0:14,0:14:39.13:0,39,1990	0/0:23,0:23:66.23:0,66,3705	0/0:20,0:20:60.20:0,60,3107	0/0:20,0:20:60.21:0,60,3226	0/0:19,0:19:57.20:0,57,3230	0/0:15,0:15:45.15:0,45,2295	0/0:29,0:29:81.75:0,82,4470	0/0:3,0:3:9.03:0,9,519
chr10_random	186504	.	G	GA	459.11	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.718;DP=571;FS=0.000;HRun=8;HaplotypeScore=54.8147;InbreedingCoeff=0.9753;MQ=82.27;MQ0=1;MQRankSum=-2.693;QD=20.87;ReadPosRankSum=0.953;VQSLOD=3.5016;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	0/0:17,0:17:45:0,45,406	0/0:8,0:8:21.01:0,21,192	0/0:16,0:15:24.76:0,25,314	0/0:18,0:17:32.94:0,33,290	0/0:31,0:31:78.02:0,78,709	0/0:20,0:20:60.01:0,60,544	0/0:16,0:16:45:0,45,405	0/0:33,0:33:81.01:0,81,735	0/0:17,0:17:48.03:0,48,439	0/0:33,0:33:90.04:0,90,823	0/0:26,0:26:72.01:0,72,647	0/0:17,0:17:51.03:0,51,467	0/0:31,0:31:84.04:0,84,769	0/0:20,1:21:22.41:0,22,459	0/0:19,0:19:44.99:0,45,403	0/0:17,0:17:48.02:0,48,439	1/1:4,18:22:48.14:554,48,0	0/0:14,0:14:36.02:0,36,329	0/0:20,0:20:54:0,54,487	0/0:24,0:24:60.01:0,60,544	0/0:15,0:15:36.02:0,36,329	0/0:17,0:17:45.02:0,45,412	0/0:20,0:20:51.01:0,51,461	0/0:15,0:15:39.02:0,39,357	0/0:23,0:23:60.01:0,60,545	0/0:24,0:24:69.02:0,69,627	0/0:31,0:32:86.07:0,86,775	0/0:5,0:5:15.01:0,15,137
chr10_random	187033	.	GC	G	1070.43	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.681;DP=805;FS=0.000;HRun=3;HaplotypeScore=85.1011;InbreedingCoeff=0.9780;MQ=69.53;MQ0=0;MQRankSum=-2.216;QD=32.44;ReadPosRankSum=1.808;VQSLOD=3.8065;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,2069	0/0:25,0:25:69.23:0,69,992	0/0:29,0:29:78.26:0,78,1101	0/0:31,0:31:90.29:0,90,1259	0/0:23,0:23:69.22:0,69,972	0/0:26,0:26:78.26:0,78,1123	0/0:19,0:19:57.19:0,57,821	0/0:40,0:40:99:0,114,1576	0/0:30,0:30:87.29:0,87,1252	0/0:35,0:35:99:0,102,1455	0/0:21,0:21:60.19:0,60,845	0/0:42,0:42:99:0,126,1795	0/0:41,0:41:99:0,123,1751	0/0:34,0:34:96.30:0,96,1357	0/0:43,0:43:99:0,112,1795	0/0:31,0:31:90.30:0,90,1296	1/1:1,32:33:74.46:1165,74,0	0/0:17,0:17:48.15:0,48,673	0/0:18,0:18:54.18:0,54,776	0/0:40,0:40:99:0,120,1708	0/0:30,0:30:90.30:0,90,1294	0/0:22,0:22:66.22:0,66,934	0/0:16,0:16:48.16:0,48,691	0/0:21,0:21:63.21:0,63,907	0/0:20,0:20:60.20:0,60,864	0/0:31,0:31:90.29:0,90,1278	0/0:31,0:31:90.28:0,90,1259	0/0:8,0:8:13.44:0,13,214
chr10_random	187542	.	C	CA	2661.16	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=11.201;DP=744;FS=6.110;HRun=2;HaplotypeScore=81.2263;InbreedingCoeff=0.9920;MQ=87.82;MQ0=0;MQRankSum=-1.512;QD=40.32;ReadPosRankSum=0.772;VQSLOD=3.8560;culprit=HaplotypeScore;set=inputR	GT:AD:DP:GQ:PL	1/1:0,49:49:99:2108,141,0	0/0:16,0:16:48.16:0,48,670	0/0:37,0:37:60.52:0,61,1206	0/0:20,0:20:40.79:0,41,589	0/0:27,0:27:75.25:0,75,1042	0/0:26,0:26:78.26:0,78,1090	0/0:23,0:23:69.17:0,69,918	0/0:29,0:29:87.28:0,87,1198	1/1:0,17:17:45.15:675,45,0	0/0:34,0:34:99:0,99,1381	0/0:24,0:24:69.23:0,69,962	0/0:26,0:26:78.24:0,78,1064	0/0:40,0:40:99:0,114,1581	0/0:25,0:25:75.25:0,75,1048	0/0:30,0:30:90.30:0,90,1253	0/0:20,1:21:18.38:0,18,793	0/0:35,0:35:99:0,102,1402	0/0:18,0:18:54.16:0,54,736	0/0:20,0:20:51.17:0,51,712	0/0:22,0:22:60.20:0,60,837	0/0:28,0:28:84.28:0,84,1172	0/0:24,0:24:72.24:0,72,1001	0/0:24,0:24:69.23:0,69,963	0/0:20,0:20:60.17:0,60,804	0/0:34,0:34:99:0,99,1338	0/0:26,0:26:78.26:0,78,1088	0/0:43,0:43:99:0,123,1714	0/0:6,0:6:18.06:0,18,251
chr10_random	187727	.	TA	T	829.46	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.334;DP=614;FS=5.446;HRun=9;HaplotypeScore=59.2243;InbreedingCoeff=0.9858;MQ=74.51;MQ0=0;MQRankSum=-3.761;QD=15.36;ReadPosRankSum=1.946;VQSLOD=3.8184;culprit=HaplotypeScore;set=inputR	GT:AD:DP:GQ:PL	1/1:0,0:15:24.44:72,24,0	0/0:16,0:16:48.14:0,48,554	0/0:14,0:14:17.38:0,17,326	0/0:8,0:8:21.06:0,21,242	1/1:3,36:38:96.03:879,96,0	0/0:31,0:31:81.23:0,81,925	0/0:9,0:9:21.06:0,21,242	0/0:28,0:28:78.22:0,78,892	0/0:16,0:16:48.14:0,48,554	0/0:22,0:22:57.17:0,57,658	0/0:26,0:26:72.04:0,72,802	0/0:16,0:16:48.14:0,48,552	0/0:23,0:23:66.18:0,66,751	0/0:22,0:22:63.18:0,63,719	0/0:22,0:22:51.15:0,51,589	0/0:30,0:30:84.08:0,84,949	0/0:25,0:25:60.12:0,60,667	0/0:13,0:13:33.10:0,33,381	0/0:23,0:23:60.17:0,60,683	0/0:26,2:28:38.73:0,39,700	0/0:23,0:23:63.19:0,63,727	0/0:15,0:15:45.12:0,45,509	0/0:27,0:27:75.22:0,75,866	0/0:15,0:15:39.12:0,39,450	0/0:30,0:29:78.20:0,78,875	0/0:33,0:33:78.22:0,78,892	0/0:39,0:39:93.28:0,93,1073	0/0:6,0:6:18.05:0,18,208
chr10_random	187811	.	T	TA	932.05	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-3.378;DP=578;FS=6.608;HRun=8;HaplotypeScore=59.3500;InbreedingCoeff=0.8053;MQ=73.02;MQ0=0;MQRankSum=0.459;QD=17.92;ReadPosRankSum=-0.714;VQSLOD=3.1472;culprit=HaplotypeScore;set=inputR	GT:AD:DP:GQ:PL	0/0:10,0:10:21.01:0,21,192	0/0:10,0:10:27:0,27,242	0/0:15,0:15:26.47:0,26,216	0/1:9,0:9:6.79:7,0,21	1/1:9,13:23:47.97:532,48,0	0/0:34,0:34:87.04:0,87,796	0/0:16,0:16:42.01:0,42,384	0/0:31,0:31:75.01:0,75,687	1/1:3,17:20:45.13:519,45,0	0/0:29,0:29:54.89:0,55,682	0/0:27,0:27:32.07:0,32,542	0/0:15,0:15:39.02:0,39,357	0/0:22,0:22:60.03:0,60,549	0/0:19,0:19:45.02:0,45,412	0/0:21,0:21:57.03:0,57,522	0/0:22,0:22:60.01:0,60,542	0/0:13,0:13:32.99:0,33,295	0/0:15,0:15:33.01:0,33,299	0/0:23,0:23:54.02:0,54,494	0/0:37,0:37:99:0,105,960	0/0:9,0:9:23.95:0,24,207	0/0:22,2:24:19.40:0,19,432	0/0:28,0:28:72:0,72,647	0/0:7,0:7:18.01:0,18,165	0/0:31,0:31:84.02:0,84,763	0/0:25,0:25:63.01:0,63,572	0/0:31,0:30:78.03:0,78,709	0/0:12,0:12:27.01:0,27,247
chr10_random	188346	.	AC	A	2125.95	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=12.686;DP=730;FS=1.007;HRun=1;HaplotypeScore=82.2891;InbreedingCoeff=0.9480;MQ=90.97;MQ0=0;MQRankSum=-3.291;QD=30.81;ReadPosRankSum=1.531;VQSLOD=3.4444;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	1/1:0,43:43:99:1348,114,0	0/0:13,0:13:39.10:0,39,575	0/0:27,0:27:78.21:0,78,1164	0/0:30,0:30:85.73:0,86,1292	0/0:28,0:27:84.28:0,84,1321	0/0:14,0:14:42.14:0,42,669	0/0:26,0:26:78.21:0,78,1188	0/0:29,0:29:87.23:0,87,1294	0/0:20,0:20:59.78:0,60,460	0/0:31,0:31:93.23:0,93,1403	0/0:25,0:25:75.19:0,75,1138	0/0:31,0:31:93.26:0,93,1387	0/0:38,0:38:99:0,114,1758	0/0:25,0:25:75.20:0,75,1145	0/0:33,0:33:99:0,99,1527	0/0:38,0:38:99:0,114,1728	1/1:0,26:26:75.23:900,75,0	0/0:9,0:9:27.09:0,27,430	0/0:25,0:25:75.20:0,75,1135	0/0:35,0:35:99:0,105,1651	0/0:17,0:17:51.17:0,51,813	0/0:25,0:25:72.12:0,72,1044	0/0:25,0:25:72.21:0,72,1100	0/0:27,0:27:81.28:0,81,1292	0/0:26,0:26:78.27:0,78,1245	0/0:33,0:33:99:0,99,1572	0/0:29,0:28:87.16:0,87,1319	0/0:2,0:2:6.02:0,6,96
chr10_random	189098	.	C	CTCCTAAGACGCTCCT	4379.22	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.176;DP=636;FS=9.274;HRun=0;HaplotypeScore=250.4266;InbreedingCoeff=0.9965;MQ=93.98;MQ0=0;MQRankSum=-7.638;QD=168.43;ReadPosRankSum=-0.011;VQSLOD=3.3356;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	1/1:4,12:17:42.14:3011,42,0	0/0:10,0:10:30.10:0,30,1299	0/0:30,0:31:93.32:0,93,3398	0/0:26,0:26:71.56:0,72,2447	0/0:22,0:22:66.23:0,66,2986	0/0:30,0:30:87.30:0,87,3820	0/0:28,0:28:81.28:0,81,3160	0/0:32,0:32:93.31:0,93,3761	0/0:22,0:22:63.20:0,63,2491	0/0:31,0:31:93.31:0,93,3974	0/0:19,0:19:57.20:0,57,2455	0/0:16,0:16:48.16:0,48,2237	0/0:35,0:35:99:0,102,4378	0/0:23,0:23:69.24:0,69,2992	0/0:36,0:36:99:0,102,4493	0/0:20,0:20:60.21:0,60,2465	1/1:2,6:9:21.07:1368,21,0	0/0:15,0:15:42.12:0,42,1851	0/0:20,0:20:60.21:0,60,2641	0/0:22,0:22:66.23:0,66,2834	0/0:16,0:16:45.15:0,45,1837	0/0:25,0:25:75.26:0,75,3390	0/0:15,0:15:45.15:0,45,2089	0/0:21,0:21:63.20:0,63,2533	0/0:33,0:33:96.33:0,96,4159	0/0:22,0:22:66.23:0,66,2515	0/0:32,0:32:96.32:0,96,4194	0/0:8,0:8:24.08:0,24,1045
chr10_random	189429	.	C	CATCAG	1470.27	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.137;DP=657;FS=6.941;HRun=0;HaplotypeScore=119.5469;InbreedingCoeff=0.9970;MQ=79.27;MQ0=0;MQRankSum=-6.151;QD=81.68;ReadPosRankSum=2.053;VQSLOD=6.0013;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	1/1:0,8:8:24.08:795,24,0	0/0:9,0:9:27.09:0,27,607	0/0:13,0:13:36.04:0,36,711	0/0:19,0:19:51.15:0,51,1066	0/0:41,0:41:99:0,123,2796	0/0:20,0:20:60.21:0,60,1375	0/0:19,0:19:57.20:0,57,1328	0/0:31,0:31:84.28:0,84,1899	0/0:23,0:23:63.21:0,63,1424	0/0:26,0:26:69.24:0,69,1592	0/0:32,0:32:96.33:0,96,2212	0/0:18,0:18:54.19:0,54,1237	0/0:32,0:32:96.30:0,96,2102	0/0:29,0:29:87.30:0,87,1981	0/0:41,0:41:99:0,123,2774	0/0:30,0:30:90.28:0,90,1963	1/1:0,9:10:24.08:795,24,0	0/0:16,0:16:48.16:0,48,1096	0/0:15,0:15:45.15:0,45,1025	0/0:21,0:21:57.20:0,57,1322	0/0:29,0:29:84.29:0,84,1938	0/0:28,0:28:84.29:0,84,1955	0/0:25,0:25:72.25:0,72,1653	0/0:18,0:18:51.09:0,51,1088	0/0:29,0:29:87.28:0,87,1981	0/0:30,0:30:90.30:0,90,2052	0/0:33,0:33:96.28:0,96,2092	0/0:12,0:12:29.68:0,30,652
chr10_random	189753	.	T	TTG	457.37	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.538;DP=623;FS=0.000;HRun=0;HaplotypeScore=73.3209;InbreedingCoeff=0.9841;MQ=69.53;MQ0=0;MQRankSum=-5.038;QD=26.90;ReadPosRankSum=0.661;VQSLOD=4.5353;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	1/1:3,7:10:18.06:310,18,0	0/0:7,0:7:21.06:0,21,302	0/0:15,0:14:39.11:0,39,555	0/0:11,0:9:23.24:0,23,197	0/0:35,0:35:99:0,105,1539	0/0:24,0:24:69.23:0,69,1035	0/0:21,0:21:63.21:0,63,944	0/0:35,0:35:99:0,99,1513	0/0:22,0:22:66.20:0,66,969	0/0:31,0:31:90.30:0,90,1359	0/0:28,0:28:81.26:0,81,1202	0/0:16,0:16:48.16:0,48,735	0/0:25,0:25:75.23:0,75,1106	0/0:20,0:20:60.19:0,60,878	0/0:30,0:30:90.28:0,90,1318	0/0:31,0:31:93.28:0,93,1361	1/1:0,7:7:15.05:264,15,0	0/0:13,0:13:39.10:0,39,554	0/0:12,0:12:36.12:0,36,551	0/0:29,0:29:87.28:0,87,1290	0/0:20,0:20:60.18:0,60,878	0/0:23,0:23:69.22:0,69,1017	0/0:14,0:14:42.13:0,42,617	0/0:15,0:15:45.12:0,45,624	0/0:33,0:33:93.31:0,93,1403	0/0:33,0:33:99:0,99,1495	0/0:35,0:35:99:0,102,1514	0/0:28,0:28:65.89:0,66,986
chr10_random	189762	.	CT	C	215.86	PASS	AB=0.550;AC=3;AF=0.054;AN=56;BaseQRankSum=5.583;DP=619;FS=0.000;HRun=3;HaplotypeScore=59.6277;InbreedingCoeff=0.6327;MQ=64.93;MQ0=1;MQRankSum=-3.445;QD=11.36;ReadPosRankSum=0.009;VQSLOD=1.2906;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	0/1:2,9:11:15.64:133,0,16	0/0:6,0:6:18.06:0,18,259	0/0:15,0:13:35.78:0,36,469	0/0:11,0:9:13.76:0,14,207	0/0:30,0:30:84.27:0,84,1185	0/0:23,0:23:69.20:0,69,969	0/0:19,0:19:50.29:0,50,770	0/0:34,0:34:96.32:0,96,1357	0/0:22,0:22:66.21:0,66,919	0/0:29,0:29:87.29:0,87,1234	0/0:27,0:27:72.24:0,72,1034	0/0:17,0:17:51.16:0,51,715	0/0:24,0:24:72.24:0,72,1030	0/0:20,0:20:60.20:0,60,861	0/0:33,0:33:96.30:0,96,1335	0/0:28,0:28:81.27:0,81,1166	1/1:2,6:8:15.04:184,15,0	0/0:13,0:13:39.13:0,39,561	0/0:13,0:13:39.13:0,39,561	0/0:30,0:30:90.25:0,90,1221	0/0:18,0:18:54.18:0,54,775	0/0:23,0:23:69.23:0,69,989	0/0:16,0:16:45.15:0,45,644	0/0:15,0:15:45.15:0,45,646	0/0:33,0:33:96.31:0,96,1362	0/0:34,0:34:99:0,99,1408	0/0:39,0:39:99:0,108,1534	0/0:28,0:25:63.21:0,63,901
chr10_random	193194	.	A	AT	1209.91	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.836;DP=582;FS=4.061;HRun=7;HaplotypeScore=55.8741;InbreedingCoeff=0.8431;MQ=68.79;MQ0=0;MQRankSum=-1.556;QD=28.81;ReadPosRankSum=-0.267;VQSLOD=4.1598;culprit=HaplotypeScore;set=inputR	GT:AD:DP:GQ:PL	0/0:13,0:13:36.06:0,36,348	0/0:13,0:13:36.02:0,36,340	0/0:9,0:9:27.04:0,27,261	0/0:3,0:3:3:0,3,29	1/1:3,39:42:99:1305,108,0	0/0:29,0:29:78.11:0,78,747	0/0:9,0:9:24.02:0,24,226	0/0:32,0:32:81.10:0,81,775	0/0:12,0:12:36.06:0,36,348	0/0:32,0:32:84.12:0,84,811	0/0:35,0:35:99:0,102,981	0/0:14,0:14:39.05:0,39,371	0/0:19,0:19:51.04:0,51,479	0/0:28,0:28:78.10:0,78,747	0/0:19,0:19:54.09:0,54,521	0/0:21,0:21:57.09:0,57,550	0/0:22,0:22:59.36:0,59,571	0/0:17,0:17:39.44:0,39,360	0/0:10,0:10:24.02:0,24,228	0/0:29,0:29:81.13:0,81,782	0/0:16,0:16:33.04:0,33,319	0/0:16,0:16:33.04:0,33,318	0/0:29,0:29:81.01:0,81,753	0/0:13,0:13:30.02:0,30,284	0/0:30,0:30:84.13:0,84,811	0/0:31,0:31:87.13:0,87,837	0/0:32,0:32:84.12:0,84,811	0/0:7,0:7:21.03:0,21,203
chr10_random	193461	.	GC	G	830.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.766;DP=568;FS=9.716;HRun=3;HaplotypeScore=51.8049;InbreedingCoeff=0.9907;MQ=84.66;MQ0=0;MQRankSum=-2.739;QD=30.76;ReadPosRankSum=0.744;VQSLOD=2.6176;culprit=HaplotypeScore;set=inputR	GT:AD:DP:GQ:PL	0/0:11,0:11:29.46:0,29,396	0/0:13,0:13:36.12:0,36,518	0/0:22,0:22:60.19:0,60,839	0/0:15,0:15:45.11:0,45,620	1/1:0,27:27:75.23:925,75,0	0/0:21,0:21:57.18:0,57,802	0/0:7,0:7:18.06:0,18,258	0/0:31,0:31:93.31:0,93,1339	0/0:14,0:14:42.14:0,42,604	0/0:27,0:27:81.27:0,81,1150	0/0:29,0:29:84.27:0,84,1191	0/0:28,0:28:81.26:0,81,1148	0/0:23,0:23:66.22:0,66,951	0/0:18,0:18:54.15:0,54,755	0/0:17,0:17:51.17:0,51,735	0/0:20,0:20:60.20:0,60,864	0/0:25,0:25:75.21:0,75,1055	0/0:17,0:17:48.16:0,48,681	0/0:15,0:15:45.14:0,45,631	0/0:27,0:27:81.26:0,81,1147	0/0:14,0:14:42.14:0,42,604	0/0:17,0:17:51.17:0,51,735	0/0:28,0:28:81.26:0,81,1145	0/0:16,0:16:45.15:0,45,648	0/0:18,0:18:51.17:0,51,733	0/0:29,0:29:87.20:0,87,1210	0/0:29,0:29:87.28:0,87,1235	0/0:10,0:10:30.10:0,30,432
chr10_random	194393	.	GA	G	1754.51	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.859;DP=796;FS=0.000;HRun=5;HaplotypeScore=80.8798;InbreedingCoeff=0.9997;MQ=86.59;MQ0=0;MQRankSum=-1.137;QD=27.85;ReadPosRankSum=1.616;VQSLOD=3.8093;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,138,1837	0/0:22,0:22:66.19:0,66,881	0/0:31,0:31:66.62:0,67,889	0/0:23,0:23:63.16:0,63,775	1/1:1,25:26:75.13:821,75,0	0/0:27,0:27:75.21:0,75,979	0/0:26,0:26:75.25:0,75,1025	0/0:33,0:33:93.27:0,93,1204	0/0:27,0:27:81.25:0,81,1080	0/0:36,0:36:99:0,105,1389	0/0:14,0:14:36.07:0,36,455	0/0:39,0:39:99:0,114,1527	0/0:39,0:39:99:0,102,1378	0/0:38,0:38:99:0,108,1442	0/0:28,0:28:84.27:0,84,1133	0/0:31,0:31:93.30:0,93,1256	1/1:0,37:37:93.27:1055,93,0	0/0:24,0:24:57.19:0,57,779	0/0:26,0:26:69.23:0,69,942	0/0:34,0:34:90.26:0,90,1181	0/0:35,0:35:99:0,99,1339	0/0:19,0:19:54.18:0,54,737	0/0:18,0:18:51.13:0,51,676	0/0:30,0:30:90.24:0,90,1193	0/0:22,0:22:66.17:0,66,865	0/0:27,0:27:72.23:0,72,958	0/0:23,0:23:66.20:0,66,871	0/0:11,0:11:30.10:0,30,410
chr10_random	194701	.	GCCTCTGA	G	875.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.937;DP=717;FS=0.000;HRun=0;HaplotypeScore=168.6234;InbreedingCoeff=0.9992;MQ=94.46;MQ0=0;MQRankSum=-5.094;QD=38.05;ReadPosRankSum=2.594;VQSLOD=3.1470;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,4420	0/0:11,0:11:33.11:0,33,1338	0/0:30,0:31:65.15:0,65,2934	0/0:37,0:37:99:0,111,3896	0/0:27,0:27:66.23:0,66,2522	0/0:14,0:14:39.12:0,39,1453	0/0:21,0:21:60.20:0,60,2332	0/0:31,0:31:87.30:0,87,3297	0/0:25,0:25:75.22:0,75,2935	0/0:26,0:26:78.27:0,78,3144	0/0:20,0:20:53.76:0,54,2119	0/0:28,0:28:84.29:0,84,3396	0/0:42,0:42:99:0,123,4856	0/0:40,0:40:99:0,114,4526	0/0:34,0:34:99:0,102,4174	0/0:29,0:29:84.29:0,84,3319	1/1:6,17:23:36.12:970,36,0	0/0:20,0:20:60.21:0,60,2431	0/0:16,0:16:48.16:0,48,1814	0/0:21,0:21:60.21:0,60,2390	0/0:32,0:32:93.32:0,93,3734	0/0:21,0:21:57.18:0,57,2156	0/0:16,0:16:39.13:0,39,1480	0/0:33,0:33:99:0,99,3949	0/0:20,0:20:60.21:0,60,2247	0/0:32,0:32:90.31:0,90,3647	0/0:16,0:16:48.16:0,48,1954	0/0:11,0:11:33.11:0,33,1347
chr10_random	195128	.	CTG	C	863.90	PASS	AB=0.916;AC=7;AF=0.135;AN=52;BaseQRankSum=8.538;DP=762;FS=1.819;HRun=0;HaplotypeScore=106.2534;InbreedingCoeff=0.4419;MQ=66.68;MQ0=10;MQRankSum=-0.503;QD=5.80;ReadPosRankSum=1.161;VQSLOD=3.2853;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	./.	0/0:9,0:9:21.07:0,21,341	0/1:50,1:23:8.15:8,0,383	0/0:43,0:25:39.58:0,40,421	1/1:10,13:23:32.76:361,33,0	0/0:25,2:28:41.56:0,42,1127	0/0:27,0:27:60.20:0,60,974	0/0:34,1:35:35.51:0,36,1009	./.	0/0:31,0:31:75.69:0,76,1152	0/1:11,2:13:6.58:7,0,370	0/0:25,1:26:12.63:0,13,640	0/0:41,2:43:1.33:0,1,1463	0/0:34,0:34:84.29:0,84,1341	0/0:37,1:38:65.67:0,66,1543	0/1:32,4:36:28.68:29,0,1054	1/1:8,18:25:50.52:594,51,0	0/0:23,0:23:66.18:0,66,1035	0/0:22,0:22:39.13:0,39,633	0/0:30,1:31:40.65:0,41,1125	0/0:48,4:52:10.41:0,10,1680	0/0:27,1:28:35.56:0,36,1051	0/0:15,1:16:2.44:0,2,521	0/0:19,0:19:37.66:0,38,687	0/0:21,1:23:26.52:0,27,883	0/0:49,3:52:56.05:0,56,1818	0/0:22,0:21:32.35:0,32,665	0/0:10,0:10:18.05:0,18,292
chr10_random	195157	.	TGTGTGTGCATGA	T	224.39	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=4.830;DP=799;FS=17.283;HRun=0;HaplotypeScore=285.7466;InbreedingCoeff=0.9751;MQ=58.93;MQ0=10;MQRankSum=-4.576;QD=6.80;ReadPosRankSum=-3.002;VQSLOD=0.4803;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	./.	0/0:9,0:9:24.08:0,24,1214	0/0:55,0:26:54.18:0,54,2141	0/0:48,0:28:43.85:0,44,2233	1/1:7,26:33:13.73:311,14,0	0/0:30,0:30:87.30:0,87,4715	0/0:31,0:31:75.26:0,75,3845	0/0:51,0:50:99:0,121,5463	./.	0/0:27,0:27:66.21:0,66,3092	0/0:13,0:13:36.11:0,36,1706	0/0:22,0:22:60.21:0,60,3176	0/0:40,0:40:99:0,105,5304	0/0:32,0:32:84.27:0,84,4514	0/0:45,0:45:99:0,120,6519	0/0:32,0:32:84.29:0,84,4452	0/0:23,0:21:51.65:0,52,2644	0/0:31,0:31:80.05:0,80,4213	0/0:24,0:24:66.23:0,66,3091	0/0:32,0:32:80.03:0,80,4072	0/0:61,0:61:99:0,159,8421	0/0:26,0:26:69.24:0,69,3482	0/0:16,0:16:39.08:0,39,1628	0/0:25,0:25:55.28:0,55,3037	0/0:26,0:26:66.22:0,66,3687	0/0:40,0:40:93.31:0,93,4738	0/0:18,0:16:39.13:0,39,1870	0/0:9,0:9:27.09:0,27,1432
chr10_random	195384	.	G	GGGTGTGGGTA	446.81	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.278;DP=819;FS=35.824;HRun=0;HaplotypeScore=265.0170;InbreedingCoeff=0.8966;MQ=58.97;MQ0=14;MQRankSum=-6.245;QD=29.79;ReadPosRankSum=-2.114;VQSLOD=1.5060;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	1/1:8,2:11:4.27:346,4,0	0/0:10,0:10:23.48:0,23,545	0/0:37,0:16:36.54:0,37,1080	0/0:32,0:16:35.95:0,36,687	0/0:32,0:31:56.32:0,56,1234	0/0:22,0:22:54.15:0,54,1349	0/0:34,0:34:99:0,99,2660	0/0:47,0:46:99:0,127,3086	1/1:2,2:4:12.04:205,12,0	0/0:27,0:26:77.73:0,78,1888	0/0:17,0:17:40.69:0,41,1011	0/0:45,0:45:99:0,110,3102	0/0:44,0:44:99:0,123,3080	0/0:31,0:31:87.18:0,87,1994	0/0:42,0:41:99:0,114,2879	0/0:45,0:45:99:0,123,3174	0/0:19,0:18:17.64:0,18,1113	0/0:20,0:20:54.16:0,54,1396	0/0:25,0:25:69.18:0,69,1613	0/0:21,0:21:56.59:0,57,1241	0/0:60,0:58:99:0,129,3329	0/0:25,0:25:72.22:0,72,1835	0/0:10,0:9:24.07:0,24,653	0/0:50,0:49:99:0,120,3543	0/0:25,0:25:66.14:0,66,1660	0/0:41,0:39:99:0,114,2980	0/0:21,0:21:60.20:0,60,1616	0/0:20,0:20:59.90:0,60,1220
chr10_random	195449	.	CCAACATATCACG	C	974.02	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.398;DP=640;FS=44.681;HRun=0;HaplotypeScore=219.8794;InbreedingCoeff=0.9789;MQ=85.30;MQ0=1;MQRankSum=-5.305;QD=57.30;ReadPosRankSum=0.455;VQSLOD=1.7661;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	1/1:4,5:9:12.04:426,12,0	0/0:12,0:12:33.11:0,33,2003	0/0:22,0:22:60.16:0,60,2817	0/0:23,0:23:54.19:0,54,2458	0/0:28,0:28:72.23:0,72,3841	0/0:21,0:21:51.18:0,51,2932	0/0:20,0:20:51.18:0,51,2974	0/0:38,0:38:90.27:0,90,4618	1/1:0,8:8:18.06:662,18,0	0/0:28,0:28:81.28:0,81,4424	0/0:12,0:12:27.09:0,27,1587	0/0:23,0:23:63.22:0,63,3582	0/0:35,0:35:93.30:0,93,5359	0/0:27,0:27:81.26:0,81,4377	0/0:32,0:32:90.25:0,90,4755	0/0:34,0:34:96.33:0,96,5701	0/0:20,0:20:60.21:0,60,3522	0/0:13,0:13:33.11:0,33,2002	0/0:26,0:26:69.23:0,69,3477	0/0:20,0:20:57.18:0,57,3249	0/0:38,0:37:87.23:0,87,4581	0/0:17,0:17:51.14:0,51,2380	0/0:17,0:17:48.16:0,48,2857	0/0:22,0:22:60.21:0,60,3536	0/0:25,0:25:69.19:0,69,3796	0/0:35,0:35:99:0,105,5507	0/0:15,0:15:45.15:0,45,2483	0/0:20,0:20:57.20:0,57,3099
chr10_random	196248	.	CA	C	1079.91	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.046;DP=630;FS=3.569;HRun=1;HaplotypeScore=61.6224;InbreedingCoeff=0.9447;MQ=82.15;MQ0=0;MQRankSum=-3.419;QD=38.57;ReadPosRankSum=0.967;VQSLOD=4.3160;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	1/1:0,28:28:84.28:1175,84,0	0/0:10,0:10:30.10:0,30,478	0/0:23,0:23:68.96:0,69,1026	0/0:19,0:19:57.13:0,57,850	0/0:45,0:45:99:0,132,2086	0/0:19,0:19:57.19:0,57,902	0/0:14,0:14:42.14:0,42,669	0/0:34,0:34:99:0,102,1632	0/0:27,0:27:81.28:0,81,1295	0/0:27,0:27:81.27:0,81,1270	0/0:22,0:22:66.23:0,66,1055	0/0:25,0:25:75.26:0,75,1199	0/0:24,0:24:72.23:0,72,1128	0/0:14,0:14:42.14:0,42,671	0/0:26,0:26:78.27:0,78,1237	0/0:25,0:25:75.26:0,75,1199	0/0:17,0:17:51.16:0,51,782	0/0:12,0:12:36.08:0,36,547	0/0:19,0:19:57.19:0,57,902	0/0:26,0:26:78.25:0,78,1224	0/0:27,0:27:81.26:0,81,1271	0/0:20,0:20:60.20:0,60,959	0/0:17,0:17:51.17:0,51,815	0/0:21,0:21:63.21:0,63,1007	0/0:16,0:16:48.15:0,48,735	0/0:30,0:30:90.30:0,90,1419	0/0:40,0:40:99:0,120,1908	0/0:3,0:3:9.03:0,9,144
chr10_random	196524	.	GA	G	1679.35	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.702;DP=489;FS=1.607;HRun=9;HaplotypeScore=53.0345;InbreedingCoeff=0.9607;MQ=81.20;MQ0=0;MQRankSum=-3.565;QD=20.48;ReadPosRankSum=2.011;VQSLOD=4.1338;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	1/1:3,18:21:51.01:467,51,0	0/0:9,0:9:24.07:0,24,277	0/0:16,1:17:16.23:0,16,366	0/0:9,0:9:15.04:0,15,161	1/1:4,27:31:69.01:632,69,0	0/0:17,0:17:48.14:0,48,554	0/0:8,0:8:24.07:0,24,277	0/0:27,0:27:78.18:0,78,877	1/1:1,11:12:30.02:275,30,0	0/0:19,1:20:23.68:0,24,519	0/0:25,0:25:66.16:0,66,735	0/0:13,0:13:30.09:0,30,346	0/0:19,0:19:54.16:0,54,623	0/0:10,0:10:24.07:0,24,277	0/0:20,0:20:51.15:0,51,588	0/0:25,0:25:60.15:0,60,672	1/1:1,17:18:51.03:467,51,0	0/0:15,1:16:14.63:0,15,409	0/0:19,1:21:49.18:0,49,576	0/0:25,0:25:66.20:0,66,761	0/0:3,0:3:9.03:0,9,104	0/0:12,0:12:27.08:0,27,312	0/0:22,0:22:57.17:0,57,658	0/0:15,0:15:42.12:0,42,485	0/0:17,0:17:45.13:0,45,519	0/0:23,0:23:66.18:0,66,747	0/0:28,0:28:75.22:0,75,865	0/0:6,0:6:12.04:0,12,138
chr10_random	196660	.	TCTTTAACACTTTTCTGTACCC	T	4300.01	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.736;DP=519;FS=1.602;HRun=0;HaplotypeScore=263.5305;InbreedingCoeff=0.9920;MQ=91.90;MQ0=0;MQRankSum=-7.691;QD=67.19;ReadPosRankSum=1.730;VQSLOD=4.3388;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	1/1:0,15:15:21.07:1237,21,0	0/0:12,0:12:33.11:0,33,2946	0/0:24,0:24:65.89:0,66,3630	0/0:29,0:29:87.30:0,87,5754	1/1:2,21:23:26.98:1081,27,0	0/0:26,0:26:78.27:0,78,6794	0/0:10,0:10:30.10:0,30,2658	0/0:32,0:32:93.32:0,93,7068	1/1:1,10:11:21.07:1237,21,0	0/0:21,0:21:63.22:0,63,5121	0/0:15,0:15:45.15:0,45,3485	0/0:11,0:11:33.11:0,33,3122	0/0:21,0:21:60.21:0,60,5215	0/0:14,0:14:39.13:0,39,3429	0/0:20,0:20:57.20:0,57,5663	0/0:21,0:21:63.22:0,63,6130	1/1:0,15:15:15.05:744,15,0	0/0:17,0:16:45.15:0,45,3257	0/0:18,0:18:51.17:0,51,4084	0/0:21,0:21:60.19:0,60,4667	0/0:9,0:9:24.08:0,24,1916	0/0:11,0:11:33.11:0,33,2759	0/0:16,0:16:42.14:0,42,3585	0/0:26,0:26:78.27:0,78,6379	0/0:20,0:20:60.21:0,60,5257	0/0:22,0:22:57.20:0,57,4670	0/0:25,0:25:75.26:0,75,7011	0/0:14,0:14:42.14:0,42,3700
chr10_random	198256	.	G	GA	541.43	PASS	AB=0.750;AC=3;AF=0.054;AN=56;BaseQRankSum=-5.028;DP=521;FS=0.749;HRun=9;HaplotypeScore=56.4614;InbreedingCoeff=0.5763;MQ=77.38;MQ0=0;MQRankSum=-2.409;QD=18.67;ReadPosRankSum=0.821;VQSLOD=3.6928;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	0/0:24,0:24:65.97:0,66,573	0/0:4,0:4:8.99:0,9,78	0/0:17,0:16:23.59:0,24,233	0/0:14,0:15:6.21:0,6,160	1/1:6,20:26:54.15:597,54,0	0/0:21,1:22:26.80:0,27,461	0/0:15,0:15:32.76:0,33,269	0/0:30,1:31:41.77:0,42,589	0/0:12,0:12:23.98:0,24,208	0/0:26,0:26:56.97:0,57,495	0/0:24,1:24:35.79:0,36,539	0/0:22,0:22:59.98:0,60,521	0/0:15,0:15:29.95:0,30,257	0/0:15,0:15:41.98:0,42,364	0/0:19,0:19:44.97:0,45,391	0/0:19,0:19:44.99:0,45,391	0/0:27,0:27:74.98:0,75,651	0/0:8,0:8:24:0,24,208	0/0:22,0:22:50.96:0,51,437	0/0:25,0:26:59.02:0,59,501	0/0:9,0:9:14.99:0,15,130	0/0:17,0:17:47.98:0,48,417	0/0:21,0:22:56.79:0,57,475	0/0:8,0:8:17.97:0,18,156	0/0:23,0:23:56.98:0,57,495	0/0:26,1:27:41.79:0,42,589	0/0:22,0:21:53.96:0,54,465	0/1:2,1:3:17.04:50,0,17
chr10_random	199657	.	AAC	A	619.01	PASS	AB=0.915;AC=15;AF=0.278;AN=54;BaseQRankSum=9.351;DP=752;FS=11.003;HRun=0;HaplotypeScore=118.4276;InbreedingCoeff=0.2527;MQ=64.60;MQ0=5;MQRankSum=-3.055;QD=2.13;ReadPosRankSum=3.501;VQSLOD=1.4755;culprit=QD;set=inputR	GT:AD:DP:GQ:PL	1/1:16,0:28:30.95:153,31,0	0/1:10,0:10:6.41:6,0,295	./.	0/0:27,0:21:12.03:0,12,157	1/1:6,0:35:8.52:42,9,0	0/1:23,2:26:31.86:32,0,681	0/0:33,1:35:26.40:0,26,812	0/0:37,0:37:30.01:0,30,347	1/1:12,0:31:31.25:154,31,0	0/0:26,0:29:17.58:0,18,629	0/0:19,0:19:33.09:0,33,463	0/0:33,0:33:47.97:0,48,670	0/1:26,2:28:1.37:1,0,801	0/1:27,2:29:53.13:53,0,519	0/0:36,3:39:7.64:0,8,939	0/0:37,0:38:38.07:0,38,1012	0/1:20,7:27:2.71:262,0,3	0/0:18,0:17:22.64:0,23,385	0/1:12,0:11:0.85:1,0,127	0/0:28,0:28:45.15:0,45,686	0/0:29,1:30:25.85:0,26,757	0/0:26,3:28:14.07:0,14,586	0/1:15,4:18:31.46:31,0,368	0/0:28,1:29:23.39:0,23,789	0/1:23,4:27:38.13:38,0,758	0/1:18,1:19:3.73:4,0,353	0/0:27,0:29:9.77:0,10,746	0/0:7,0:7:11.25:0,11,137
chr10_random	200057	.	CTG	C	2139.63	PASS	AB=0.955;AC=8;AF=0.143;AN=56;BaseQRankSum=11.753;DP=867;FS=7.855;HRun=0;HaplotypeScore=100.6174;InbreedingCoeff=0.6639;MQ=67.27;MQ0=6;MQRankSum=-0.453;QD=14.56;ReadPosRankSum=1.178;VQSLOD=3.2044;culprit=HaplotypeScore;set=inputR	GT:AD:DP:GQ:PL	1/1:5,20:26:36.81:656,37,0	0/0:14,0:14:33.11:0,33,538	0/1:22,0:14:14.46:14,0,105	0/0:24,0:14:26.63:0,27,275	1/1:6,24:30:69.13:815,69,0	0/0:35,2:37:22.48:0,22,1370	0/0:27,0:27:63.20:0,63,992	0/0:27,0:27:51.17:0,51,832	1/1:3,26:29:66.09:762,66,0	0/1:36,4:40:45.42:45,0,1367	0/0:23,0:23:17.42:0,17,791	0/0:27,2:29:4.84:0,5,1065	0/0:32,0:32:75.26:0,75,1205	0/0:37,0:37:99:0,108,1701	0/0:43,0:43:99:0,108,1760	0/0:41,1:42:56.35:0,56,1380	0/0:29,0:29:63.21:0,63,1012	0/0:16,0:16:32.71:0,33,469	0/0:26,0:25:60.18:0,60,947	0/0:27,0:27:35.80:0,36,1038	0/0:43,1:43:74.44:0,74,1691	0/0:45,1:46:45.78:0,46,1612	0/0:30,1:31:38.32:0,38,1122	0/0:35,0:35:93.31:0,93,1491	0/0:33,2:35:7.40:0,7,1137	0/0:38,0:38:84.28:0,84,1336	0/0:43,2:45:22.44:0,22,1352	0/0:12,0:12:33.11:0,33,527
chr10_random	202616	.	G	GA	3622.66	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.981;DP=718;FS=1.435;HRun=0;HaplotypeScore=68.4385;InbreedingCoeff=0.9405;MQ=94.33;MQ0=0;MQRankSum=-4.498;QD=45.86;ReadPosRankSum=0.530;VQSLOD=3.6837;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	1/1:0,30:30:84.29:1340,84,0	0/0:11,0:11:33.11:0,33,461	0/0:34,0:34:93.30:0,93,1267	0/0:29,0:29:66.48:0,66,1009	1/1:0,21:21:63.21:988,63,0	0/0:33,0:33:96.31:0,96,1325	0/0:26,0:26:75.25:0,75,1049	0/0:29,0:29:87.28:0,87,1200	1/1:0,28:28:81.28:1295,81,0	0/0:26,0:26:78.26:0,78,1091	0/0:27,0:27:81.26:0,81,1115	0/0:36,0:36:99:0,108,1510	0/0:26,0:26:78.26:0,78,1091	0/0:21,0:21:63.19:0,63,856	0/0:29,0:29:81.24:0,81,1098	0/0:39,0:39:99:0,117,1635	0/0:21,0:20:63.21:0,63,881	0/0:19,0:18:57.17:0,57,779	0/0:24,0:24:69.23:0,69,962	0/0:28,0:28:84.28:0,84,1175	0/0:27,0:27:81.27:0,81,1130	0/0:12,0:12:36.12:0,36,502	0/0:23,0:23:66.22:0,66,922	0/0:26,0:26:75.25:0,75,1047	0/0:20,0:20:60.17:0,60,818	0/0:33,0:33:93.31:0,93,1300	0/0:38,0:37:99:0,114,1592	0/0:2,0:2:3.01:0,3,42
chr10_random	203430	.	GTGTTTT	G	265.16	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.601;DP=566;FS=0.000;HRun=0;HaplotypeScore=128.8217;InbreedingCoeff=0.8382;MQ=68.91;MQ0=2;MQRankSum=-2.283;QD=24.11;ReadPosRankSum=-1.414;VQSLOD=2.6532;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	1/1:3,8:11:18.06:356,18,0	0/0:3,0:3:9.03:0,9,324	0/0:33,0:28:56.92:0,57,2136	0/0:39,0:36:93.19:0,93,2876	0/0:23,0:23:66.23:0,66,2269	0/0:11,0:11:33.11:0,33,1085	0/0:45,0:45:99:0,135,4569	0/0:14,0:14:42.14:0,42,1442	0/0:28,0:28:78.27:0,78,2693	0/0:22,0:22:63.22:0,63,2171	0/0:7,0:6:18.06:0,18,554	0/0:36,0:36:99:0,102,3442	0/0:17,0:17:48.16:0,48,1724	0/0:31,0:31:93.27:0,93,3068	0/0:14,0:14:42.14:0,42,1500	0/0:19,0:19:57.18:0,57,1925	0/0:28,0:28:84.29:0,84,2739	0/0:13,0:13:36.11:0,36,1175	0/0:14,0:14:36.12:0,36,1126	0/0:9,0:9:26.58:0,27,848	0/0:52,1:53:99:0,153,4897	0/0:8,0:8:21.07:0,21,700	0/0:7,0:7:21.07:0,21,757	0/0:34,0:34:96.31:0,96,3138	0/0:12,0:12:32.78:0,33,1056	0/0:20,0:20:54.19:0,54,1878	0/0:12,0:12:36.12:0,36,1188	0/0:2,0:2:6.02:0,6,216
chr10_random	203875	.	G	GA	229.14	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.783;DP=521;FS=2.317;HRun=9;HaplotypeScore=56.8369;InbreedingCoeff=0.8368;MQ=61.33;MQ0=10;MQRankSum=-3.864;QD=14.32;ReadPosRankSum=-2.255;VQSLOD=3.1812;culprit=HaplotypeScore;set=inputR	GT:AD:DP:GQ:PL	0/0:32,0:32:68.18:0,68,579	0/0:4,0:4:8.99:0,9,78	0/0:19,0:6:11.88:0,12,101	0/0:14,0:6:8.96:0,9,73	1/1:1,15:15:32.41:324,32,0	0/0:24,0:24:56.90:0,57,495	0/0:22,0:22:53.97:0,54,469	0/0:34,0:33:65.89:0,66,568	0/0:11,0:11:17.99:0,18,156	0/0:19,0:18:44.97:0,45,390	0/0:14,0:13:21.77:0,22,267	0/0:14,0:14:35.98:0,36,312	0/0:26,0:26:62.95:0,63,542	0/0:24,0:23:47.98:0,48,417	0/0:16,0:16:38.97:0,39,338	0/0:24,0:24:44.88:0,45,390	0/0:20,0:20:41.97:0,42,364	0/0:19,0:19:44.96:0,45,389	0/0:26,1:26:20.66:0,21,437	0/0:10,0:10:17.97:0,18,156	0/0:6,0:6:14.98:0,15,126	0/0:20,0:19:41.93:0,42,364	0/0:12,0:11:23.98:0,24,208	0/0:17,0:17:26.94:0,27,234	0/0:19,0:18:47.97:0,48,413	0/0:26,0:25:62.93:0,63,540	0/0:17,0:17:38.92:0,39,327	0/0:15,0:14:38.98:0,39,338
chr10_random	204218	.	A	AG	1107.64	PASS	AB=0.920;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.672;DP=732;FS=3.377;HRun=2;HaplotypeScore=70.7769;InbreedingCoeff=0.6480;MQ=81.61;MQ0=0;MQRankSum=-1.592;QD=21.30;ReadPosRankSum=0.915;VQSLOD=3.7069;culprit=QD;set=inputR	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1395	0/0:12,0:12:36.12:0,36,467	0/0:23,0:23:33.76:0,34,613	0/0:17,0:17:48.14:0,48,601	0/0:26,0:26:75.20:0,75,954	0/0:31,0:31:93.30:0,93,1207	0/0:28,0:28:78.22:0,78,981	0/0:29,0:29:78.23:0,78,991	1/1:0,29:29:81.21:1187,81,0	0/0:35,0:35:99:0,105,1344	0/0:18,0:18:54.18:0,54,701	0/0:26,0:26:78.25:0,78,999	0/0:31,0:31:90.28:0,90,1154	0/0:37,0:37:99:0,105,1362	0/0:32,0:32:96.29:0,96,1217	0/1:21,2:23:26.73:27,0,677	0/0:39,0:39:99:0,117,1517	0/0:12,0:12:33.09:0,33,413	0/0:16,0:16:48.15:0,48,617	0/0:25,0:25:72.23:0,72,935	0/0:21,0:21:63.20:0,63,818	0/0:26,0:26:78.25:0,78,1001	0/0:28,0:28:81.22:0,81,1019	0/0:31,0:31:84.27:0,84,1090	0/0:25,0:25:69.22:0,69,896	0/0:32,0:32:93.30:0,93,1208	0/0:29,0:29:87.27:0,87,1115	0/0:14,0:14:42.14:0,42,545
chr10_random	206191	.	C	CTTTT	4559.46	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-5.425;DP=705;FS=14.008;HRun=8;HaplotypeScore=114.9507;InbreedingCoeff=0.9995;MQ=79.11;MQ0=0;MQRankSum=-3.237;QD=50.10;ReadPosRankSum=-1.574;VQSLOD=2.6331;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	1/1:3,31:38:81.28:1839,81,0	0/0:12,0:12:33.09:0,33,476	0/0:18,0:18:41.82:0,42,550	0/0:21,0:22:26.63:0,27,544	0/0:30,0:30:78.23:0,78,1176	0/0:30,0:30:81.23:0,81,1201	0/0:25,0:26:61.41:0,61,890	0/0:37,0:37:84.15:0,84,1217	0/0:3,0:21:47.87:0,48,383	1/1:9,17:28:69.24:1533,69,0	1/1:6,18:25:54.14:1187,54,0	0/0:23,0:23:66.22:0,66,999	0/0:29,0:29:72.18:0,72,1065	0/0:28,0:28:69.20:0,69,1044	0/0:31,0:31:78.21:0,78,1180	0/0:23,0:23:66.22:0,66,997	0/0:24,0:24:69.19:0,69,1007	0/0:15,0:15:39.13:0,39,590	0/0:21,0:21:54.08:0,54,784	0/0:37,0:37:96.28:0,96,1432	0/0:28,0:28:72.20:0,72,1067	0/0:23,0:23:63.19:0,63,953	0/0:30,0:30:78.23:0,78,1178	0/0:18,0:18:47.17:0,47,687	0/0:21,0:20:57.15:0,57,822	0/0:25,0:25:69.20:0,69,1024	0/0:25,0:25:66.19:0,66,997	0/0:17,0:17:48.14:0,48,726
chr10_random	206753	.	A	AGTTG	4126.82	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-7.114;DP=748;FS=3.532;HRun=0;HaplotypeScore=118.1500;InbreedingCoeff=0.7987;MQ=58.77;MQ0=5;MQRankSum=1.640;QD=33.28;ReadPosRankSum=-1.909;VQSLOD=3.3529;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	1/1:11,25:35:36.12:885,36,0	0/0:14,0:14:32.97:0,33,478	0/0:29,0:16:5.18:0,5,116	0/0:25,0:16:14.95:0,15,173	0/0:32,0:32:60.20:0,60,990	0/0:25,0:25:51.13:0,51,768	0/0:13,0:13:33.05:0,33,464	0/0:26,0:26:42.07:0,42,596	0/0:23,0:23:66.22:0,66,1066	1/1:5,38:47:99:2424,123,0	1/1:4,22:25:44.95:736,45,0	0/0:23,0:23:60.06:0,60,825	0/0:38,0:38:78.22:0,78,1199	0/0:24,0:24:51.17:0,51,816	0/0:35,0:35:90.29:0,90,1453	0/0:22,0:22:51.15:0,51,778	0/0:34,0:33:83.04:0,83,1264	0/0:30,0:28:58.88:0,59,957	0/0:16,0:15:24.07:0,24,341	0/0:12,0:12:23.96:0,24,326	0/0:45,0:45:84.67:0,85,1472	0/0:24,0:24:48.13:0,48,712	0/0:22,0:22:39.09:0,39,561	0/0:48,0:48:99:0,111,1753	0/0:21,0:21:51.15:0,51,816	0/1:15,0:15:82.31:82,0,443	0/0:27,0:26:51.13:0,51,762	0/0:16,0:16:33.06:0,33,455
chr10_random	207119	.	GCTTCCCCTAC	G	1804.29	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.058;DP=750;FS=3.124;HRun=0;HaplotypeScore=216.1976;InbreedingCoeff=0.9699;MQ=82.41;MQ0=0;MQRankSum=-7.357;QD=72.17;ReadPosRankSum=2.781;VQSLOD=3.4923;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,132,6247	0/0:11,0:11:33.10:0,33,1626	0/0:24,0:24:66.19:0,66,2763	0/0:24,0:25:69.16:0,69,2630	0/0:36,0:36:99:0,105,5283	0/0:26,0:26:78.27:0,78,4027	0/0:22,0:22:66.22:0,66,3339	0/0:34,0:34:99:0,102,4486	1/1:4,21:25:57.03:1899,57,0	0/0:27,0:26:78.22:0,78,3613	0/0:22,0:22:66.21:0,66,3111	0/0:26,0:26:78.27:0,78,4101	0/0:38,0:38:99:0,114,5428	0/0:33,0:33:99:0,99,5009	0/0:41,0:41:99:0,120,5849	0/0:32,0:32:96.33:0,96,4858	0/0:23,0:23:69.21:0,69,3294	0/0:12,0:12:33.96:0,34,1572	0/0:28,0:28:81.26:0,81,3787	0/0:23,0:23:69.24:0,69,3490	0/0:33,0:32:99:0,99,5103	0/0:26,0:26:78.27:0,78,3967	0/0:24,0:24:69.18:0,69,3393	0/0:20,0:20:60.19:0,60,2849	0/0:31,0:30:93.29:0,93,4521	0/0:28,0:28:84.28:0,84,4306	0/0:28,0:28:81.28:0,81,4113	0/0:4,0:4:12.04:0,12,640
chr10_random	207424	.	C	CT	3960.49	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-9.812;DP=679;FS=0.797;HRun=6;HaplotypeScore=63.3197;InbreedingCoeff=0.9747;MQ=73.64;MQ0=0;MQRankSum=-1.601;QD=31.68;ReadPosRankSum=1.736;VQSLOD=4.1359;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	1/1:1,18:19:51.16:642,51,0	0/0:17,0:17:45.08:0,45,452	0/0:15,0:15:31.62:0,32,309	0/0:10,0:10:26.07:0,26,241	1/1:2,30:32:87.19:1059,87,0	0/0:24,0:24:69.16:0,69,704	0/0:18,0:18:48.09:0,48,483	0/0:33,0:33:81.16:0,81,820	1/1:3,16:19:42.13:528,42,0	1/1:4,27:31:81.24:995,81,0	1/1:2,22:24:60.15:737,60,0	0/0:29,0:29:78.16:0,78,789	0/0:30,0:30:84.17:0,84,848	0/0:26,0:26:78.02:0,78,771	0/0:37,0:37:99:0,105,1071	0/0:27,0:27:75.15:0,75,757	0/0:30,0:30:84.19:0,84,856	0/0:17,0:17:45.10:0,45,459	0/0:25,0:25:69.13:0,69,696	0/0:32,0:32:87.17:0,87,876	0/0:16,0:16:42.07:0,42,421	0/0:20,0:20:48.09:0,48,484	0/0:17,0:17:42.09:0,42,428	0/0:8,0:8:21.05:0,21,214	0/0:40,0:40:99:0,114,1155	0/0:40,1:41:82.52:0,83,1151	0/0:39,0:38:99:0,111,1107	0/0:3,0:3:6.01:0,6,61
chr10_random	209307	.	TTA	T	370.92	PASS	AC=10;AF=0.200;AN=50;BaseQRankSum=5.251;DP=187;FS=0.000;HRun=0;HaplotypeScore=25.6333;InbreedingCoeff=0.6848;MQ=78.45;MQ0=0;MQRankSum=-0.785;QD=15.45;ReadPosRankSum=0.536;VQSLOD=3.1140;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	1/1:0,3:3:6.02:77,6,0	0/0:4,0:4:12.04:0,12,197	1/1:4,0:3:2.22:7,2,0	0/0:16,0:8:12.30:0,12,157	1/1:4,0:4:6.02:76,6,0	0/0:12,0:12:24.07:0,24,379	0/0:1,0:1:3.01:0,3,51	0/0:30,0:30:72.24:0,72,1191	0/0:4,0:4:12.04:0,12,202	1/1:1,8:9:24.08:308,24,0	1/1:2,2:4:3.01:39,3,0	./.	0/0:4,0:4:12.04:0,12,202	0/0:4,0:4:12.04:0,12,191	0/0:3,0:3:9.03:0,9,152	0/0:4,0:4:12.04:0,12,202	0/0:15,0:15:36.12:0,36,607	0/0:15,0:15:39.13:0,39,658	0/0:13,0:13:33.11:0,33,557	0/0:2,0:2:6.02:0,6,100	0/0:4,0:4:12.04:0,12,202	./.	./.	0/0:1,0:1:3.01:0,3,51	0/0:6,0:6:15.05:0,15,253	0/0:6,0:6:12.03:0,12,178	0/0:8,0:8:24.08:0,24,405	0/0:10,0:10:24.08:0,24,405
chr10_random	210685	.	G	GCA	1199.17	PASS	AB=0.739;AC=6;AF=0.115;AN=52;BaseQRankSum=-3.813;DP=646;FS=4.347;HRun=0;HaplotypeScore=106.8466;InbreedingCoeff=0.1719;MQ=57.28;MQ0=13;MQRankSum=1.499;QD=9.83;ReadPosRankSum=-1.740;VQSLOD=2.6593;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	0/0:42,0:42:64.88:0,65,678	0/0:3,0:6:11.69:0,12,104	./.	./.	0/0:5,0:19:7.04:0,7,30	0/1:8,7:16:58.54:74,0,59	1/1:33,6:40:13.31:713,13,0	0/0:28,0:29:14.94:0,15,144	0/0:12,0:12:9.02:0,9,99	0/0:21,0:21:15.96:0,16,196	0/0:9,0:9:14.87:0,15,146	0/0:25,0:28:53.46:0,53,512	0/0:32,0:36:59.43:0,59,540	0/0:37,0:41:26.48:0,26,570	0/0:27,0:28:41.90:0,42,431	0/0:27,0:29:53.42:0,53,506	0/0:29,0:36:47.89:0,48,532	0/1:16,1:18:9.46:9,0,277	0/0:11,0:11:5.31:0,5,45	0/0:9,0:10:20.87:0,21,204	0/0:41,0:42:49.96:0,50,456	0/0:20,0:23:29.86:0,30,298	0/1:4,8:14:21.50:121,0,22	0/1:19,13:32:90.53:406,0,91	0/0:17,0:19:25.84:0,26,239	0/0:22,0:22:24.05:0,24,257	0/0:14,0:14:14.97:0,15,143	0/0:9,0:9:3.89:0,4,35
chr10_random	210914	.	CCT	C	721.86	PASS	AB=0.864;AC=31;AF=0.705;AN=44;BaseQRankSum=4.958;DP=526;FS=7.764;HRun=0;HaplotypeScore=73.6993;InbreedingCoeff=0.4761;MQ=62.66;MQ0=5;MQRankSum=-0.714;QD=2.30;ReadPosRankSum=0.243;VQSLOD=0.7483;culprit=QD;set=inputR	GT:AD:DP:GQ:PL	0/0:39,0:40:39.05:0,39,484	./.	./.	./.	./.	1/1:15,2:17:3.01:32,3,0	1/1:25,2:28:5.51:49,6,0	1/1:21,0:21:5.18:40,5,0	0/0:16,0:16:2.99:0,3,24	1/1:9,0:9:5.22:33,5,0	./.	1/1:22,1:23:3.01:32,3,0	0/0:25,0:24:6:0,6,68	0/0:24,0:23:12:0,12,138	0/1:16,3:19:34.80:56,0,35	0/0:17,0:17:0:0,0,0	1/1:21,2:23:14.86:134,15,0	1/1:14,0:15:8.67:52,9,0	1/1:17,0:17:1.24:3,1,0	1/1:13,1:16:8.47:57,8,0	1/1:37,0:37:12.86:94,13,0	1/1:15,1:17:8.69:60,9,0	0/0:12,0:12:5.91:0,6,60	1/1:22,0:22:9.01:90,9,0	./.	1/1:23,1:25:10.08:75,10,0	1/1:11,0:11:3.45:23,3,0	1/1:11,1:12:3.01:32,3,0
chr10_random	210955	.	C	CTCTT	76.10	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.696;DP=575;FS=0.000;HRun=0;HaplotypeScore=111.7105;InbreedingCoeff=0.8139;MQ=60.80;MQ0=11;MQRankSum=-0.057;QD=2.31;ReadPosRankSum=-3.864;VQSLOD=0.9256;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	0/0:44,0:44:80.72:0,81,851	0/0:6,0:6:11.63:0,12,97	0/0:21,0:13:26.11:0,26,256	0/0:29,0:18:33.88:0,34,350	1/1:7,0:16:8.80:92,9,0	0/0:14,0:14:28.75:0,29,255	0/0:33,0:33:66.01:0,66,574	0/0:25,0:23:50.01:0,50,454	1/1:1,15:17:4.83:85,5,0	0/0:26,0:25:49.02:0,49,469	0/0:6,0:6:8.98:0,9,73	0/0:17,0:17:26.98:0,27,235	0/0:28,0:26:47.08:0,47,392	0/0:30,0:29:68.51:0,69,634	0/0:21,0:21:47.96:0,48,447	0/0:21,0:21:50.83:0,51,404	0/0:21,0:21:47.87:0,48,448	0/0:16,0:16:45.35:0,45,394	0/0:21,0:21:54:0,54,485	0/0:14,0:14:16.95:0,17,162	0/0:34,0:33:44.14:0,44,492	0/0:18,0:18:32.62:0,33,293	0/0:10,0:9:23.99:0,24,231	0/0:19,0:19:35.98:0,36,325	0/0:17,0:17:32.97:0,33,278	0/0:27,0:27:57.03:0,57,555	0/0:17,0:17:38.30:0,38,328	0/0:7,0:5:9:0,9,85
chr10_random	211432	.	C	CACAACT	406.90	PASS	AC=6;AF=0.120;AN=50;BaseQRankSum=1.935;DP=754;FS=1.330;HRun=0;HaplotypeScore=159.6621;InbreedingCoeff=0.8154;MQ=79.25;MQ0=1;MQRankSum=-1.788;QD=5.98;ReadPosRankSum=-0.559;VQSLOD=2.1154;culprit=QD;set=inputR	GT:AD:DP:GQ:PL	0/0:44,0:43:27.93:0,28,670	0/0:12,0:12:6.02:0,6,113	./.	./.	1/1:22,4:27:12.04:249,12,0	0/0:31,0:31:48.09:0,48,743	0/0:26,0:26:24.06:0,24,412	1/1:22,0:21:1.25:3,1,0	0/0:37,0:37:24.01:0,24,565	0/0:44,0:44:33.10:0,33,588	0/0:18,0:18:9.02:0,9,140	0/0:32,0:32:45.14:0,45,858	0/0:41,0:41:57.16:0,57,996	0/0:29,0:29:39.12:0,39,709	0/0:32,0:32:47.91:0,48,775	0/0:26,0:26:45.15:0,45,861	0/0:20,0:20:36:0,36,601	0/0:11,0:11:18.06:0,18,357	0/0:18,0:17:21.06:0,21,383	0/0:30,0:30:9.03:0,9,179	0/0:30,0:30:26.98:0,27,397	1/1:19,0:19:12.04:266,12,0	0/0:23,0:23:30.09:0,30,534	0/0:23,0:23:42.10:0,42,730	0/0:17,0:17:30.08:0,30,529	0/0:31,0:31:30.56:0,31,563	0/0:32,0:32:30.09:0,30,531	./.
chr10_random	212375	.	G	GT	959.33	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.024;DP=724;FS=13.327;HRun=6;HaplotypeScore=69.0462;InbreedingCoeff=0.9945;MQ=83.42;MQ0=0;MQRankSum=-4.132;QD=30.95;ReadPosRankSum=3.461;VQSLOD=3.2119;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	0/0:29,0:29:81.11:0,81,801	0/0:9,0:9:23.87:0,24,223	0/0:25,0:25:63:0,63,594	0/0:22,0:22:23.45:0,23,400	0/0:38,0:38:99:0,99,987	0/0:23,0:23:68.95:0,69,685	0/0:26,0:26:66.13:0,66,667	0/0:29,0:29:75.15:0,75,756	1/1:2,29:31:84.27:1054,84,0	0/0:30,0:30:78.14:0,78,774	0/0:23,0:23:62.69:0,63,606	0/0:16,0:16:45.08:0,45,450	0/0:36,0:36:96.16:0,96,961	0/0:28,0:28:81.18:0,81,825	0/0:41,0:41:99:0,114,1147	0/0:25,0:25:72.14:0,72,726	0/0:23,0:23:66.15:0,66,673	0/0:9,0:9:27.06:0,27,275	0/0:21,0:21:48.10:0,48,484	0/0:41,0:41:99:0,111,1081	0/0:14,0:14:42.09:0,42,423	0/0:20,0:20:57.09:0,57,570	0/0:37,0:37:99:0,100,1024	0/0:26,0:26:78.14:0,78,786	0/0:21,0:21:63.01:0,63,611	0/0:25,0:25:66.12:0,66,663	0/0:39,0:38:99:0,105,1046	0/0:17,0:17:42.08:0,42,421
chr10_random	215086	.	AAGGAGG	A	155.05	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=4.565;DP=636;FS=0.000;HRun=0;HaplotypeScore=95.1870;InbreedingCoeff=0.4497;MQ=41.67;MQ0=83;MQRankSum=-3.400;QD=2.98;ReadPosRankSum=-0.363;VQSLOD=1.0843;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	0/0:36,0:30:46.54:0,47,1075	0/0:7,0:7:18.05:0,18,385	0/0:43,0:3:9.03:0,9,177	0/0:41,0:3:8.96:0,9,124	0/0:26,0:21:47.48:0,47,1006	0/0:23,0:21:44.88:0,45,1121	0/0:26,0:17:23.51:0,24,539	0/0:34,0:19:39.11:0,39,775	1/1:7,8:12:12.04:240,12,0	0/0:24,0:22:45.08:0,45,937	0/0:10,0:9:14.96:0,15,177	0/0:13,0:12:30.01:0,30,666	0/0:26,0:20:48.02:0,48,1097	0/0:10,0:6:12.47:0,12,189	0/1:18,0:12:3.44:3,0,106	0/1:19,0:15:4.72:5,0,461	0/0:32,0:27:57.09:0,57,1336	0/0:28,0:18:35.88:0,36,784	0/0:16,0:4:9.03:0,9,199	0/0:22,0:19:42.07:0,42,967	0/0:40,0:28:63.07:0,63,1532	0/0:17,0:15:27.07:0,27,611	0/0:19,0:18:42.07:0,42,1011	0/0:27,0:21:35.53:0,36,727	0/0:20,0:19:36.12:0,36,996	0/0:28,0:25:72.21:0,72,1791	0/0:10,0:8:20.66:0,21,387	0/0:6,0:5:14.90:0,15,199
chr10_random	215196	.	GGAGGAA	G	50.97	PASS	AB=0.767;AC=1;AF=0.019;AN=52;BaseQRankSum=3.329;DP=762;FS=1.689;HRun=0;HaplotypeScore=103.9376;InbreedingCoeff=-0.0226;MQ=43.27;MQ0=108;MQRankSum=-2.482;QD=2.22;ReadPosRankSum=-0.286;VQSLOD=2.1100;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	0/0:45,0:33:54:0,54,1480	0/0:13,0:13:29.46:0,29,729	./.	0/0:21,0:2:3.48:0,3,34	0/1:16,7:15:25.44:125,0,25	0/0:33,0:25:57.19:0,57,1791	0/0:34,0:26:56.97:0,57,1480	0/0:34,0:22:54.15:0,54,1217	./.	0/0:44,1:36:73.13:0,73,2023	0/0:9,0:8:15.05:0,15,454	0/0:24,0:16:33.11:0,33,980	0/0:35,0:28:59.22:0,59,2374	0/0:31,0:18:41.97:0,42,1081	0/0:28,0:24:27.91:0,28,1866	0/0:31,0:25:54.84:0,55,1739	0/0:32,0:24:36.18:0,36,1536	0/0:26,0:17:51.17:0,51,1480	0/0:36,0:19:44.98:0,45,1076	0/0:16,0:14:36.12:0,36,1024	0/0:63,0:45:84.12:0,84,2553	0/0:19,1:16:30.10:0,30,841	0/0:19,0:18:48.15:0,48,1279	0/0:37,0:28:67.08:0,67,1976	0/0:24,0:20:42.14:0,42,1315	0/0:45,0:27:61.07:0,61,1927	0/0:11,0:10:27.04:0,27,844	0/0:9,0:6:15.05:0,15,525
chr10_random	218125	.	TA	T	438.41	PASS	AB=0.905;AC=3;AF=0.054;AN=56;BaseQRankSum=6.826;DP=679;FS=1.200;HRun=12;HaplotypeScore=67.8512;InbreedingCoeff=0.5717;MQ=67.76;MQ0=0;MQRankSum=-0.477;QD=8.12;ReadPosRankSum=-0.100;VQSLOD=2.5115;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	0/0:34,0:34:66.11:0,66,658	0/0:12,0:12:24.05:0,24,244	0/0:8,1:7:5.96:0,6,50	0/0:11,0:12:14.85:0,15,122	1/1:10,25:35:50.05:533,50,0	0/0:22,1:23:39.88:0,40,580	0/0:21,0:24:36.01:0,36,479	0/0:28,1:30:39.77:0,40,564	0/0:25,0:27:68.79:0,69,661	0/0:28,0:31:77.81:0,78,751	0/0:23,0:24:47.92:0,48,464	0/0:24,0:24:57.11:0,57,579	0/0:27,2:30:37.64:0,38,725	0/0:21,0:21:54.08:0,54,535	0/0:22,1:23:24.85:0,25,428	0/0:33,2:37:66.60:0,67,820	0/0:18,3:21:4.59:0,5,400	0/0:19,2:21:10.57:0,11,463	0/0:23,1:25:36.72:0,37,539	0/0:36,1:37:62.13:0,62,778	0/1:16,2:19:1.41:1,0,336	0/0:21,1:22:33.88:0,34,525	0/0:22,1:24:30.65:0,31,459	0/0:6,0:6:12.02:0,12,122	0/0:17,2:21:10.29:0,10,425	0/0:27,3:30:13.66:0,14,493	0/0:35,0:40:66.03:0,66,773	0/0:17,0:17:45.06:0,45,443
chr10_random	221476	.	CT	C	434.37	PASS	AB=0.892;AC=10;AF=0.179;AN=56;BaseQRankSum=5.312;DP=665;FS=3.858;HRun=15;HaplotypeScore=84.2192;InbreedingCoeff=0.2496;MQ=65.16;MQ0=0;MQRankSum=-0.336;QD=2.34;ReadPosRankSum=4.427;VQSLOD=-0.2684;culprit=HaplotypeScore;set=inputR	GT:AD:DP:GQ:PL	0/0:46,1:51:67.80:0,68,655	0/0:6,0:6:16.23:0,16,129	0/0:14,0:9:14.06:0,14,91	0/0:12,0:8:14.10:0,14,105	0/0:33,0:36:46.96:0,47,248	0/0:22,1:24:21.80:0,22,317	0/0:23,0:23:62.85:0,63,532	0/0:25,0:25:38.70:0,39,311	1/1:12,14:27:43.60:287,44,0	0/0:33,2:37:24.27:0,24,440	0/0:23,0:24:57.90:0,58,443	0/1:21,1:22:7.21:7,0,168	0/0:22,1:23:2.70:0,3,372	0/0:18,1:19:3.30:0,3,251	1/1:8,17:27:40.44:246,40,0	0/0:21,1:22:19.61:0,20,315	0/0:26,0:26:56.41:0,56,458	0/0:15,0:15:10.88:0,11,208	0/1:22,1:23:9.16:9,0,178	0/1:20,2:23:9.49:9,0,179	0/1:13,4:17:8.08:8,0,178	0/0:20,0:25:49.78:0,50,432	0/0:23,0:24:41.69:0,42,337	0/1:13,2:15:5.15:5,0,188	0/0:22,1:23:3.32:0,3,245	0/0:30,2:34:8.86:0,9,328	0/1:26,4:31:4.81:5,0,334	0/0:16,0:16:23.77:0,24,184
chr10_random	221564	.	AC	A	1037.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.923;DP=735;FS=0.000;HRun=1;HaplotypeScore=72.0462;InbreedingCoeff=1.0000;MQ=84.72;MQ0=0;MQRankSum=-2.320;QD=37.07;ReadPosRankSum=0.364;VQSLOD=3.8149;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,1817	0/0:19,0:19:57.19:0,57,911	0/0:20,0:20:60.20:0,60,942	0/0:26,0:26:71.79:0,72,1080	1/1:0,28:28:81.27:1133,81,0	0/0:27,0:27:81.23:0,81,1217	0/0:32,0:32:96.33:0,96,1531	0/0:27,0:27:81.28:0,81,1290	0/0:23,0:23:69.20:0,69,1069	0/0:23,0:23:66.22:0,66,1036	0/0:15,0:15:44.98:0,45,685	0/0:20,0:20:60.20:0,60,951	0/0:33,0:33:99:0,99,1551	0/0:38,0:38:99:0,114,1798	0/0:36,0:36:99:0,105,1674	0/0:25,0:25:75.26:0,75,1195	0/0:22,0:22:66.22:0,66,1051	0/0:21,0:21:54.18:0,54,862	0/0:24,0:24:72.14:0,72,1046	0/0:28,0:28:84.29:0,84,1342	0/0:40,0:40:99:0,120,1913	0/0:25,0:25:75.17:0,75,1166	0/0:22,0:22:66.22:0,66,1051	0/0:22,0:21:66.22:0,66,1049	0/0:25,0:25:75.26:0,75,1199	0/0:32,0:32:92.99:0,93,1485	0/0:22,0:22:66.21:0,66,1028	0/0:19,0:19:57.19:0,57,903
chr10_random	222029	.	T	TAA	1201.81	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.588;DP=724;FS=1.643;HRun=4;HaplotypeScore=83.9792;InbreedingCoeff=0.9985;MQ=81.11;MQ0=0;MQRankSum=-3.558;QD=44.51;ReadPosRankSum=1.876;VQSLOD=2.7422;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	0/0:30,0:30:87.21:0,87,1093	0/0:12,0:12:36.12:0,36,480	0/0:22,0:22:66.20:0,66,850	0/0:15,0:15:28.06:0,28,348	0/0:33,0:33:90.28:0,90,1185	0/0:22,0:22:63.19:0,63,821	0/0:18,0:18:51.15:0,51,665	0/0:37,0:36:99:0,105,1388	1/1:1,26:27:72.25:1297,72,0	0/0:32,0:32:90.27:0,90,1152	0/0:31,0:31:87.28:0,87,1151	0/0:28,0:28:84.28:0,84,1121	0/0:26,0:26:78.26:0,78,1040	0/0:21,0:21:57.17:0,57,744	0/0:21,0:21:60.17:0,60,782	0/0:28,0:28:84.28:0,84,1119	0/0:29,0:29:84.26:0,84,1105	0/0:16,0:16:45.15:0,45,598	0/0:29,0:29:69.21:0,69,906	0/0:31,0:31:87.29:0,87,1161	0/0:20,0:20:57.06:0,57,703	0/0:31,0:31:93.29:0,93,1224	0/0:27,0:27:78.26:0,78,1040	0/0:40,0:40:99:0,108,1405	0/0:28,0:28:81.27:0,81,1077	0/0:31,0:31:87.27:0,87,1134	0/0:28,0:28:84.24:0,84,1087	0/0:11,0:11:30.10:0,30,400
chr10_random	222368	.	G	GA	1250.93	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.835;DP=565;FS=0.574;HRun=9;HaplotypeScore=53.8114;InbreedingCoeff=0.9219;MQ=82.06;MQ0=0;MQRankSum=1.424;QD=24.06;ReadPosRankSum=-0.251;VQSLOD=4.1904;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	0/0:30,0:30:77.95:0,78,672	0/0:4,0:4:12:0,12,104	0/0:15,0:14:16.22:0,16,221	0/0:18,0:18:20.46:0,20,257	1/1:3,24:27:69.01:709,69,0	0/0:18,0:18:53.99:0,54,469	0/0:13,1:14:5.78:0,6,276	0/0:42,0:42:99:0,105,888	1/1:1,24:25:60.16:664,60,0	0/0:27,0:27:59.97:0,60,517	0/0:22,0:23:59.02:0,59,501	0/0:16,1:17:32.97:0,33,286	0/0:15,0:15:38.99:0,39,338	0/0:13,0:13:29.97:0,30,257	0/0:22,0:22:59.99:0,60,521	0/0:24,0:24:68.96:0,69,593	0/0:20,0:20:53.85:0,54,468	0/0:12,0:13:31.99:0,32,260	0/0:20,1:21:26.79:0,27,458	0/0:25,0:25:62.96:0,63,543	0/0:17,0:17:26.98:0,27,234	0/0:23,0:23:62.96:0,63,543	0/0:10,0:10:23.99:0,24,208	0/0:22,0:22:65.97:0,66,569	0/0:22,0:22:53.97:0,54,466	0/0:20,0:20:47.98:0,48,417	0/0:24,0:24:62.94:0,63,540	0/0:14,0:14:38.93:0,39,327
chr10_random	222802	.	TAAA	T	296.89	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.640;DP=447;FS=6.404;HRun=11;HaplotypeScore=62.2874;InbreedingCoeff=0.8944;MQ=64.33;MQ0=1;MQRankSum=-0.820;QD=26.99;ReadPosRankSum=1.286;VQSLOD=2.3006;culprit=HaplotypeScore;set=inputR	GT:AD:DP:GQ:PL	0/0:18,0:18:51.17:0,51,1019	0/0:7,0:7:21.07:0,21,424	0/0:12,0:9:18.03:0,18,272	0/0:8,0:4:9.50:0,10,180	0/0:22,0:22:66.23:0,66,1327	0/0:9,0:9:24.08:0,24,485	0/0:8,0:9:24.08:0,24,468	0/0:24,0:25:60.20:0,60,1148	1/1:1,10:11:30.09:391,30,0	0/0:25,0:25:59.92:0,60,1249	0/0:24,0:26:75.20:0,75,1353	0/0:10,0:10:27.09:0,27,545	0/0:9,0:9:15.05:0,15,303	0/0:12,0:12:33.11:0,33,642	0/0:16,0:16:39.13:0,39,788	0/0:16,0:16:40.69:0,41,793	0/0:25,0:26:75.05:0,75,1341	0/0:17,0:20:56.95:0,57,945	0/0:15,0:15:33.11:0,33,633	0/0:22,0:22:54.17:0,54,1023	0/0:5,0:5:12.04:0,12,242	0/0:19,0:19:54.19:0,54,1080	0/0:14,0:14:39.03:0,39,672	0/0:13,0:15:39.13:0,39,753	0/0:19,0:19:54.16:0,54,1046	0/0:15,0:15:42.12:0,42,780	0/0:26,0:26:73.79:0,74,1380	0/0:15,0:15:42.12:0,42,779
chr10_random	222901	.	AT	A	207.41	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.507;DP=493;FS=2.515;HRun=9;HaplotypeScore=47.1181;InbreedingCoeff=0.9325;MQ=74.38;MQ0=0;MQRankSum=0.567;QD=15.95;ReadPosRankSum=-0.040;VQSLOD=3.4625;culprit=HaplotypeScore;set=inputR	GT:AD:DP:GQ:PL	0/0:22,0:22:60.05:0,60,653	0/0:15,0:15:36.11:0,36,415	0/0:16,0:15:11.70:0,12,102	0/0:10,0:9:16.19:0,16,149	0/0:19,0:19:48.14:0,48,554	0/0:22,0:22:63.19:0,63,727	0/0:13,0:13:39.10:0,39,440	0/0:29,0:29:69.20:0,69,789	1/1:1,12:13:33.02:302,33,0	0/0:15,0:15:42.12:0,42,485	0/0:21,0:21:54.16:0,54,623	0/0:18,0:18:48.11:0,48,540	0/0:18,0:18:54.15:0,54,614	0/0:7,0:7:21.06:0,21,242	0/0:23,0:23:57.17:0,57,658	0/0:11,0:11:27.08:0,27,312	0/0:23,0:23:63.17:0,63,717	0/0:10,0:10:27.04:0,27,297	0/0:17,0:17:42.11:0,42,468	0/0:25,0:25:60.65:0,61,694	0/0:7,0:7:21.05:0,21,234	0/0:20,1:21:32.64:0,33,582	0/0:14,0:14:39.06:0,39,425	0/0:7,0:7:15:0,15,158	0/0:20,0:20:51.15:0,51,589	0/0:17,0:17:42.12:0,42,485	0/0:37,0:37:96.27:0,96,1096	0/0:23,0:23:57.16:0,57,648
chr10_random	223459	.	TA	T	1231.55	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.328;DP=631;FS=4.170;HRun=2;HaplotypeScore=60.6663;InbreedingCoeff=0.9975;MQ=78.40;MQ0=0;MQRankSum=-3.237;QD=32.41;ReadPosRankSum=2.315;VQSLOD=3.5365;culprit=HaplotypeScore;set=inputR	GT:AD:DP:GQ:PL	0/0:25,0:25:75.25:0,75,1114	0/0:14,0:14:39.12:0,39,563	0/0:14,0:14:36.06:0,36,473	0/0:17,0:17:36.10:0,36,499	1/1:1,37:38:99:1326,105,0	0/0:23,0:23:69.20:0,69,977	0/0:15,0:15:45.15:0,45,674	0/0:30,0:30:90.28:0,90,1281	0/0:16,0:16:48.16:0,48,719	0/0:22,0:22:66.21:0,66,955	0/0:22,0:22:66.21:0,66,967	0/0:13,0:13:36.12:0,36,539	0/0:30,0:30:90.29:0,90,1324	0/0:21,0:21:60.20:0,60,899	0/0:26,0:26:78.26:0,78,1167	0/0:29,0:29:87.28:0,87,1267	0/0:36,0:36:99:0,105,1550	0/0:15,0:15:45.14:0,45,653	0/0:17,0:17:48.14:0,48,698	0/0:24,0:24:72.23:0,72,1037	0/0:15,0:15:45.14:0,45,654	0/0:20,0:20:60.19:0,60,876	0/0:30,0:30:90.30:0,90,1348	0/0:23,0:23:69.23:0,69,1034	0/0:21,0:21:57.19:0,57,853	0/0:30,0:30:90.30:0,90,1347	0/0:37,0:37:99:0,111,1641	0/0:8,0:8:24.08:0,24,354
chr10_random	223758	.	A	ATGTTTGTT	904.94	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.843;DP=525;FS=0.000;HRun=0;HaplotypeScore=128.0607;InbreedingCoeff=0.8182;MQ=62.61;MQ0=1;MQRankSum=-4.710;QD=60.33;ReadPosRankSum=-0.556;VQSLOD=3.1448;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	0/0:24,0:24:60.21:0,60,1543	0/0:11,0:11:33.10:0,33,751	0/0:14,0:10:18.02:0,18,308	0/0:11,0:7:11.99:0,12,161	0/0:27,0:27:60.21:0,60,1540	0/0:19,0:19:48.16:0,48,1232	0/0:14,0:14:30.09:0,30,723	0/0:30,0:30:36.11:0,36,845	1/1:5,9:15:24.08:998,24,0	0/0:16,0:16:39.12:0,39,955	0/0:23,0:23:45.15:0,45,1028	0/0:12,0:12:33.11:0,33,826	0/0:27,0:27:51.09:0,51,1250	0/0:17,0:17:45.15:0,45,1124	0/0:23,0:23:54.10:0,54,1343	0/0:18,0:18:42.12:0,42,915	0/0:23,0:23:52.69:0,53,1193	0/0:25,0:25:48.15:0,48,1168	0/0:15,0:15:27.08:0,27,639	0/0:15,0:15:36.11:0,36,854	0/0:2,0:2:3.01:0,3,77	0/0:23,0:23:60.19:0,60,1469	0/0:26,0:26:48.16:0,48,1237	0/0:15,0:15:33.08:0,33,697	0/0:13,0:13:36.11:0,36,878	0/0:25,0:25:60.19:0,60,1493	0/0:33,0:33:81.26:0,81,2008	0/0:9,0:9:27.09:0,27,697
chr10_random	228272	.	CAGGCAG	C	1149.97	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.513;DP=674;FS=4.860;HRun=0;HaplotypeScore=136.8287;InbreedingCoeff=0.9988;MQ=81.44;MQ0=0;MQRankSum=-7.025;QD=50.00;ReadPosRankSum=-0.259;VQSLOD=3.2840;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,4658	0/0:13,0:13:36.12:0,36,1281	0/0:18,0:18:46.68:0,47,1421	0/0:19,0:19:48.16:0,48,1526	1/1:2,21:23:51.18:1245,51,0	0/0:24,0:24:66.21:0,66,2217	0/0:16,0:16:42.14:0,42,1529	0/0:28,0:28:75.26:0,75,2670	0/0:24,0:24:72.23:0,72,2543	0/0:31,0:31:90.30:0,90,3068	0/0:17,0:17:48.15:0,48,1640	0/0:34,0:34:99:0,102,3543	0/0:31,0:31:93.31:0,93,3262	0/0:22,0:22:60.21:0,60,2027	0/0:28,0:28:84.29:0,84,2955	0/0:29,0:29:84.29:0,84,3004	0/0:26,0:26:75.23:0,75,2488	0/0:18,0:18:51.17:0,51,1842	0/0:27,0:27:81.28:0,81,2870	0/0:30,0:30:87.30:0,87,3094	0/0:27,0:27:81.28:0,81,2907	0/0:20,0:20:60.21:0,60,2106	0/0:26,0:26:78.27:0,78,2760	0/0:16,0:16:48.16:0,48,1664	0/0:18,0:18:54.19:0,54,1979	0/0:25,0:25:72.25:0,72,2557	0/0:31,0:31:90.31:0,90,3219	0/0:9,0:9:27.09:0,27,989
chr10_random	229042	.	AGT	A	532.56	PASS	AB=0.887;AC=13;AF=0.250;AN=52;BaseQRankSum=6.364;DP=511;FS=6.990;HRun=0;HaplotypeScore=70.3964;InbreedingCoeff=-0.1869;MQ=62.26;MQ0=8;MQRankSum=0.180;QD=2.20;ReadPosRankSum=1.761;VQSLOD=0.8644;culprit=QD;set=inputR	GT:AD:DP:GQ:PL	0/0:31,1:33:6.47:0,6,408	0/0:8,0:8:12.04:0,12,180	./.	./.	0/0:18,0:23:15.01:0,15,166	0/1:22,1:23:15:15,0,207	0/1:13,3:15:78.11:78,0,159	0/0:16,0:16:8.99:0,9,92	1/1:12,0:18:17.04:84,17,0	0/1:13,1:16:21.05:21,0,77	0/1:15,3:19:42.01:42,0,242	0/1:23,0:23:2.34:2,0,329	0/0:12,0:11:12.01:0,12,157	0/0:13,0:14:6.02:0,6,91	0/0:13,0:14:0.90:0,1,166	0/1:8,1:9:47.87:48,0,57	0/1:20,2:24:55.21:55,0,367	0/1:18,6:25:99:140,0,274	0/0:23,0:22:18.05:0,18,239	0/0:14,0:14:12.03:0,12,158	0/0:17,1:18:14.77:0,15,169	0/0:9,1:10:9.01:0,9,112	0/0:7,0:7:9:0,9,95	0/1:24,4:28:87.07:87,0,426	0/1:14,1:16:43.29:43,0,117	0/0:24,0:24:15.01:0,15,198	0/1:21,3:24:63.05:63,0,291	0/0:7,0:7:6:0,6,69
chr10_random	230001	.	AT	A	252.79	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.964;DP=515;FS=6.297;HRun=8;HaplotypeScore=49.7351;InbreedingCoeff=0.9970;MQ=87.64;MQ0=0;MQRankSum=-1.381;QD=14.87;ReadPosRankSum=-0.008;VQSLOD=3.1141;culprit=HaplotypeScore;set=inputR	GT:AD:DP:GQ:PL	0/0:18,0:18:51.14:0,51,604	0/0:12,0:12:36.11:0,36,427	0/0:19,0:19:41.83:0,42,475	0/0:24,0:24:53.96:0,54,589	0/0:28,0:27:75.22:0,75,894	0/0:20,0:20:57.17:0,57,678	0/0:11,0:11:30.09:0,30,362	0/0:21,0:21:54.14:0,54,624	1/1:3,14:17:36.05:348,36,0	0/0:27,0:27:69.21:0,69,833	0/0:21,0:21:60.18:0,60,723	0/0:10,0:10:30.09:0,30,362	0/0:17,0:17:48.13:0,48,558	0/0:19,0:19:57.17:0,57,688	0/0:19,0:19:57.15:0,57,661	0/0:17,0:17:51.15:0,51,606	0/0:24,0:24:69.20:0,69,823	0/0:20,0:20:60.05:0,60,703	0/0:16,0:16:42.10:0,42,492	0/0:15,0:15:36.11:0,36,435	0/0:15,0:15:39.12:0,39,471	0/0:12,0:12:33.10:0,33,397	0/0:13,0:13:39.12:0,39,471	0/0:24,0:24:66.16:0,66,781	0/0:18,0:17:42.11:0,42,488	0/0:14,0:14:36.11:0,36,435	0/0:32,0:32:90.28:0,90,1083	0/0:12,0:12:27.08:0,27,326
chr10_random	230939	.	C	CAG	393.83	PASS	AB=0.995;AC=12;AF=0.240;AN=50;BaseQRankSum=0.745;DP=612;FS=0.000;HRun=0;HaplotypeScore=102.9613;InbreedingCoeff=0.3082;MQ=65.28;MQ0=9;MQRankSum=-1.406;QD=1.80;ReadPosRankSum=-1.250;VQSLOD=1.8312;culprit=QD;set=inputR	GT:AD:DP:GQ:PL	0/1:31,1:31:17.38:115,0,17	0/0:11,0:12:8.81:0,9,70	./.	./.	1/1:27,0:26:8.86:48,9,0	0/1:22,0:22:26.64:27,0,93	0/0:18,0:18:13.70:0,14,126	0/0:27,0:25:2.46:0,2,10	0/0:24,0:24:17.04:0,17,165	1/1:24,0:24:12.28:131,12,0	0/1:19,0:19:5.14:40,0,5	0/0:10,0:10:8.72:0,9,61	0/0:12,0:13:15.04:0,15,160	1/1:21,3:23:9.57:159,10,0	0/0:27,0:28:32.70:0,33,262	0/1:30,0:32:14.02:14,0,244	0/0:19,12:30:17.37:0,17,140	0/0:15,0:15:9.02:0,9,96	0/1:15,0:15:2.05:2,0,15	0/0:26,0:27:6.29:0,6,185	0/0:22,0:23:26.83:0,27,200	0/0:15,0:14:5.99:0,6,54	0/0:16,0:16:15.06:0,15,102	0/0:31,0:32:44.76:0,45,381	0/0:25,0:25:18.01:0,18,171	0/1:23,0:23:4.20:4,0,109	0/0:26,0:27:37.98:0,38,330	./.
chr10_random	233225	.	AT	A	370.69	PASS	AB=0.923;AC=6;AF=0.107;AN=56;BaseQRankSum=10.721;DP=670;FS=0.000;HRun=9;HaplotypeScore=70.6033;InbreedingCoeff=0.6893;MQ=69.98;MQ0=0;MQRankSum=-0.087;QD=4.63;ReadPosRankSum=0.227;VQSLOD=0.3328;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	0/0:47,1:49:99:0,111,1490	0/0:12,0:12:36.09:0,36,406	0/0:21,0:19:25.46:0,25,378	0/1:21,1:17:3.36:3,0,276	1/1:23,0:23:15.80:211,16,0	0/0:18,0:20:44.96:0,45,498	0/0:23,0:23:60.14:0,60,677	0/0:20,1:21:20.65:0,21,475	1/1:27,0:27:61.33:276,61,0	0/0:28,1:29:50.76:0,51,832	0/0:21,0:21:60.17:0,60,683	0/0:20,0:20:57.17:0,57,657	0/0:25,0:25:57.16:0,57,649	0/0:31,0:31:87.24:0,87,991	0/0:21,0:21:57.16:0,57,648	0/0:22,1:23:38.70:0,39,680	0/0:36,0:36:99:0,105,1211	0/0:33,0:33:93.26:0,93,1063	0/0:18,1:19:20.67:0,21,492	0/0:21,1:22:38.73:0,39,699	0/0:23,0:23:60.18:0,60,693	0/0:20,0:20:54.15:0,54,615	0/0:13,1:14:8.64:0,9,353	0/0:24,0:24:69.19:0,69,785	0/0:19,0:19:57.17:0,57,658	0/0:27,0:27:78.23:0,78,900	0/0:36,0:37:99:0,102,1147	0/1:7,1:8:3.41:3,0,208
chr10_random	233234	.	TC	T	1556.03	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.767;DP=690;FS=1.787;HRun=2;HaplotypeScore=70.1598;InbreedingCoeff=0.9145;MQ=69.32;MQ0=0;MQRankSum=-2.130;QD=31.12;ReadPosRankSum=1.525;VQSLOD=3.3983;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,152,1957	0/0:13,0:13:36.11:0,36,486	0/0:23,1:21:38.62:0,39,546	0/0:22,1:18:3.22:0,3,425	1/1:1,25:26:66.11:811,66,0	0/0:18,0:18:54.03:0,54,651	0/0:24,0:24:72.20:0,72,936	0/0:22,0:22:63.58:0,64,780	1/1:0,24:24:69.12:866,69,0	0/0:29,0:29:82.82:0,83,1070	0/0:23,0:23:65.86:0,66,843	0/0:21,0:21:63.18:0,63,842	0/0:21,0:21:63.19:0,63,835	0/0:31,0:31:90.25:0,90,1214	0/0:18,0:18:54.16:0,54,731	0/0:24,0:24:68.74:0,69,926	0/0:39,0:39:99:0,117,1539	0/0:35,0:35:99:0,103,1364	0/0:22,0:22:63.60:0,64,761	0/0:25,0:25:71.67:0,72,929	0/0:23,0:23:69.19:0,69,908	0/0:19,0:19:57.16:0,57,749	0/0:13,0:13:33.86:0,34,463	0/0:28,0:28:84.18:0,84,1051	0/0:22,0:22:66.09:0,66,839	0/0:27,0:27:78.25:0,78,1070	0/0:37,0:37:99:0,108,1426	0/0:7,0:7:17.06:0,17,248
chr10_random	234483	.	CTAAGTAGTATA	C	929.75	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.073;DP=697;FS=9.466;HRun=0;HaplotypeScore=224.4910;InbreedingCoeff=0.9910;MQ=86.17;MQ0=0;MQRankSum=-5.378;QD=71.52;ReadPosRankSum=0.757;VQSLOD=2.2750;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	0/0:16,0:16:48.16:0,48,2416	0/0:14,0:14:39.13:0,39,2143	0/0:32,0:32:84.23:0,84,3690	0/0:21,0:21:45.11:0,45,1805	0/0:46,0:46:99:0,120,5886	0/0:33,0:33:93.31:0,93,5043	0/0:20,0:20:54.19:0,54,2989	0/0:29,0:29:84.28:0,84,4499	1/1:5,8:13:30.10:1024,30,0	0/0:36,0:36:99:0,99,5355	0/0:26,0:26:69.24:0,69,3566	0/0:30,0:30:81.26:0,81,3993	0/0:30,0:30:78.27:0,78,4236	0/0:25,0:25:75.26:0,75,4106	0/0:33,0:33:90.31:0,90,4831	0/0:26,0:26:72.25:0,72,3872	0/0:11,0:11:30.08:0,30,1487	0/0:20,0:20:60.21:0,60,3228	0/0:20,0:20:48.16:0,48,2543	0/0:36,0:36:90.31:0,90,4865	0/0:6,0:6:18.06:0,18,993	0/0:28,0:28:72.25:0,72,3992	0/0:23,0:23:54.14:0,54,2703	0/0:20,0:20:57.20:0,57,3146	0/0:24,0:24:63.22:0,63,3548	0/0:33,0:33:87.30:0,87,4662	0/0:30,0:30:72.25:0,72,3695	0/0:16,0:16:48.13:0,48,2552
chr10_random	234560	.	CTTTT	C	1317.02	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.279;DP=736;FS=0.000;HRun=5;HaplotypeScore=136.0169;InbreedingCoeff=0.9802;MQ=57.77;MQ0=10;MQRankSum=-2.641;QD=26.34;ReadPosRankSum=-2.623;VQSLOD=-0.5702;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	0/0:31,0:31:67.28:0,67,1834	0/0:10,0:10:30.10:0,30,772	0/0:34,0:13:32.48:0,32,486	0/0:42,0:14:11.05:0,11,327	1/1:20,13:34:77.41:1047,77,0	0/0:29,0:30:90.21:0,90,2017	0/0:20,0:20:60.15:0,60,1352	0/0:37,0:37:99:0,108,2231	1/1:10,0:15:33.04:391,33,0	0/0:31,1:31:44.26:0,44,1915	0/0:23,0:23:63.20:0,63,1405	0/0:34,0:34:90.66:0,91,1941	0/0:32,0:31:87.29:0,87,2071	0/0:22,0:22:66.23:0,66,1546	0/0:28,0:28:81.26:0,81,1864	0/0:21,0:21:62.68:0,63,1413	0/0:21,0:21:50.77:0,51,1284	0/0:18,0:17:49.95:0,50,1066	0/0:24,0:23:69.20:0,69,1380	0/0:28,0:28:84.27:0,84,1826	0/0:21,0:20:57.18:0,57,1223	0/0:24,0:24:72.02:0,72,1474	0/0:18,0:18:49.71:0,50,985	0/0:20,0:20:60.19:0,60,1188	0/0:24,0:24:50.57:0,51,1658	0/0:30,0:30:84.28:0,84,1876	0/0:30,0:30:90.31:0,90,2216	0/0:31,0:31:67.83:0,68,2092
chr10_random	234566	.	CTG	C	646.61	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.827;DP=699;FS=2.584;HRun=0;HaplotypeScore=108.7399;InbreedingCoeff=0.9773;MQ=59.62;MQ0=4;MQRankSum=-2.811;QD=13.20;ReadPosRankSum=-2.907;VQSLOD=3.2212;culprit=HaplotypeScore;set=inputR	GT:AD:DP:GQ:PL	0/0:32,0:32:90.01:0,90,1554	0/0:10,0:10:30.05:0,30,531	0/0:30,0:15:28.97:0,29,443	0/0:33,0:11:10.47:0,10,313	1/1:21,13:34:71.13:577,71,0	0/0:28,0:28:46.85:0,47,1484	0/0:20,0:20:47.22:0,47,1014	0/0:36,0:36:99:0,105,1754	1/1:15,0:15:30.98:191,31,0	0/0:29,0:29:79.71:0,80,1451	0/0:20,0:20:40.62:0,41,1005	0/0:33,0:33:86.83:0,87,1503	0/0:29,0:28:84.24:0,84,1548	0/0:25,0:25:69.15:0,69,1231	0/0:26,0:26:72.21:0,72,1303	0/0:19,0:19:57.15:0,57,1021	0/0:21,0:21:54.15:0,54,969	0/0:17,0:16:45.15:0,45,816	0/0:22,0:21:63.07:0,63,1096	0/0:30,0:30:71.28:0,71,1467	0/0:19,0:19:53.92:0,54,962	0/0:20,0:20:57.18:0,57,1050	0/0:15,0:15:32.95:0,33,616	0/0:22,0:22:62.15:0,62,957	0/0:25,0:24:54.58:0,55,1182	0/0:29,0:29:77.31:0,77,1549	0/0:30,0:30:71.66:0,72,1516	0/0:30,0:30:64.26:0,64,1396
chr10_random	235052	.	TTGTG	T	949.55	PASS	AB=0.857;AC=12;AF=0.231;AN=52;BaseQRankSum=5.671;DP=706;FS=12.924;HRun=0;HaplotypeScore=143.1877;InbreedingCoeff=0.6847;MQ=54.12;MQ0=32;MQRankSum=-1.247;QD=5.05;ReadPosRankSum=-1.333;VQSLOD=1.8058;culprit=QD;set=inputR	GT:AD:DP:GQ:PL	1/1:26,13:40:23.51:295,24,0	0/0:2,0:2:3.01:0,3,70	./.	./.	1/1:13,0:22:12.45:113,12,0	0/0:29,0:30:44.61:0,45,802	0/0:23,0:23:18.05:0,18,343	0/0:33,0:32:15.52:0,16,227	1/1:9,0:22:7.83:62,8,0	1/1:29,7:34:11.54:287,12,0	1/1:12,11:26:27.69:334,28,0	0/0:18,0:19:30.07:0,30,491	0/0:11,0:14:3.01:0,3,52	0/0:25,0:25:36.09:0,36,730	0/1:18,0:20:13.27:13,0,457	0/1:17,1:21:13.97:14,0,458	0/0:30,0:29:41.80:0,42,769	0/0:21,0:21:20.17:0,20,279	0/0:21,0:18:14.84:0,15,234	0/0:20,0:21:53.90:0,54,1054	0/0:43,0:40:34.42:0,34,618	0/0:24,0:25:31.74:0,32,604	0/0:27,0:31:47.61:0,48,861	0/0:35,0:38:38.65:0,39,761	0/0:23,0:25:17.88:0,18,323	0/0:38,0:37:35.63:0,36,650	0/0:15,0:15:32.83:0,33,605	0/0:11,0:6:14.79:0,15,293
chr10_random	236634	.	TAC	T	214.02	PASS	AB=0.913;AC=11;AF=0.204;AN=54;BaseQRankSum=3.958;DP=773;FS=2.242;HRun=0;HaplotypeScore=110.2617;InbreedingCoeff=-0.2229;MQ=64.56;MQ0=22;MQRankSum=1.401;QD=0.67;ReadPosRankSum=0.501;VQSLOD=2.2124;culprit=QD;set=inputR	GT:AD:DP:GQ:PL	0/1:25,0:26:7.95:8,0,249	0/0:9,0:9:1.41:0,1,223	0/0:46,0:19:0:0,0,0	./.	0/1:13,7:21:45.52:131,0,46	0/0:28,1:29:8.28:0,8,444	0/0:34,0:34:39.12:0,39,548	0/0:30,0:28:0.76:0,1,363	0/1:24,4:27:27.59:28,0,440	0/1:27,3:30:42.57:43,0,556	0/0:21,0:21:29.69:0,30,359	0/1:31,3:35:30.31:30,0,651	0/1:25,3:28:15.58:16,0,629	0/1:30,3:33:27.65:28,0,417	0/0:32,0:32:48.16:0,48,706	0/1:34,1:36:2.71:3,0,797	0/0:32,0:32:32.16:0,32,711	0/1:19,0:18:0.26:0,0,224	0/0:13,0:14:24.06:0,24,324	0/0:16,0:16:30.07:0,30,408	0/1:37,3:40:4.58:5,0,682	0/1:21,2:23:52.47:52,0,306	0/0:12,0:26:45.01:0,45,447	0/0:20,0:36:25.43:0,25,429	0/0:23,0:23:51.05:0,51,746	0/0:21,1:22:11.46:0,11,517	0/0:19,0:19:2.82:0,3,351	0/0:8,0:8:21.07:0,21,318
chr10_random	237100	.	A	AACAG	1811.80	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.820;DP=711;FS=0.772;HRun=0;HaplotypeScore=114.8337;InbreedingCoeff=0.9932;MQ=78.51;MQ0=0;MQRankSum=-2.765;QD=67.10;ReadPosRankSum=-0.530;VQSLOD=5.5619;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	0/0:28,0:28:81.28:0,81,1493	0/0:11,0:11:30.08:0,30,525	0/0:22,0:22:54.14:0,54,941	0/0:12,0:12:33.11:0,33,595	1/1:3,24:27:72.25:1907,72,0	0/0:26,0:26:78.27:0,78,1426	0/0:34,0:34:91.96:0,92,1677	0/0:36,0:36:99:0,99,1771	0/0:24,0:24:72.25:0,72,1324	0/0:26,0:26:69.24:0,69,1250	0/0:23,0:23:63.22:0,63,1171	0/0:28,0:28:84.29:0,84,1556	0/0:37,0:37:99:0,102,1892	0/0:37,0:37:99:0,111,1996	0/0:34,0:34:93.31:0,93,1695	0/0:37,0:37:99:0,108,1985	0/0:19,0:19:54.17:0,54,962	0/0:8,0:8:21.07:0,21,392	0/0:21,0:21:57.18:0,57,1029	0/0:32,0:32:90.31:0,90,1668	0/0:27,0:27:78.26:0,78,1403	0/0:12,0:12:27.08:0,27,462	0/0:30,0:30:81.26:0,81,1446	0/0:36,0:36:99:0,105,1917	0/0:26,0:26:75.26:0,75,1386	0/0:27,0:27:78.27:0,78,1444	0/0:22,0:22:54.18:0,54,994	0/0:9,0:9:27.09:0,27,503
chr10_random	237482	.	TA	T	670.30	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.390;DP=615;FS=1.589;HRun=7;HaplotypeScore=57.0575;InbreedingCoeff=0.9606;MQ=77.93;MQ0=0;MQRankSum=1.012;QD=23.11;ReadPosRankSum=1.221;VQSLOD=3.5678;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	0/0:13,0:13:39.12:0,39,491	0/0:13,0:13:36.10:0,36,440	0/0:15,0:14:27.07:0,27,320	0/0:12,0:12:12.06:0,12,235	0/0:27,0:27:81.17:0,81,987	0/0:32,0:32:81.26:0,81,1019	0/0:10,0:10:27.08:0,27,329	0/0:43,0:43:99:0,105,1257	1/1:1,28:29:75.17:765,75,0	0/0:27,0:27:69.19:0,69,835	0/0:31,0:31:93.30:0,93,1170	0/0:14,0:14:36.12:0,36,453	0/0:30,0:30:87.28:0,87,1095	0/0:13,0:13:39.12:0,39,490	0/0:26,0:26:69.21:0,69,855	0/0:28,0:28:84.27:0,84,1057	0/0:25,0:25:69.20:0,69,846	0/0:7,0:7:21.07:0,21,264	0/0:18,0:18:51.16:0,51,642	0/0:36,1:37:74.73:0,75,1252	0/0:10,0:10:27.07:0,27,326	0/0:15,0:15:45.14:0,45,566	0/0:36,0:36:99:0,99,1222	0/0:8,0:8:24.08:0,24,302	0/0:28,0:28:78.24:0,78,969	0/0:23,0:23:57.17:0,57,695	0/0:36,0:36:99:0,99,1221	0/0:9,0:9:27.04:0,27,321
chr10_random	238650	.	GCT	G	677.16	PASS	AB=0.936;AC=28;AF=0.700;AN=40;BaseQRankSum=3.971;DP=591;FS=27.259;HRun=0;HaplotypeScore=84.7388;InbreedingCoeff=0.1369;MQ=69.59;MQ0=28;MQRankSum=0.015;QD=2.26;ReadPosRankSum=2.754;VQSLOD=-0.1794;culprit=QD;set=inputR	GT:AD:DP:GQ:PL	0/0:26,0:26:2.99:0,3,24	./.	./.	./.	1/1:17,0:25:2.84:14,3,0	1/1:31,0:30:8.42:90,8,0	0/0:13,0:13:0.47:0,0,1	./.	0/0:10,0:10:3.01:0,3,43	./.	0/0:24,0:24:3.01:0,3,44	1/1:11,1:12:5.85:46,6,0	1/1:19,3:22:5.78:46,6,0	1/1:9,0:13:8.39:42,8,0	1/1:17,4:21:11.85:103,12,0	0/1:16,1:19:31.87:66,0,32	0/1:18,0:18:11.04:18,0,11	1/1:8,0:8:1.82:5,2,0	1/1:17,1:17:3.01:32,3,0	1/1:19,0:20:5.85:44,6,0	./.	./.	./.	1/1:17,3:19:11.86:109,12,0	0/1:24,0:24:25.72:26,0,76	0/1:13,2:15:14.96:26,0,15	1/1:14,1:15:8.04:65,8,0	1/1:14,1:15:8.80:70,9,0
chr10_random	239277	.	A	AC	1136.99	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.212;DP=720;FS=0.691;HRun=1;HaplotypeScore=79.8395;InbreedingCoeff=0.9991;MQ=84.75;MQ0=0;MQRankSum=-8.557;QD=27.73;ReadPosRankSum=1.943;VQSLOD=3.5435;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	0/0:21,0:21:60.19:0,60,778	0/0:11,0:11:33.11:0,33,429	0/0:38,0:38:99:0,111,1433	0/0:24,0:24:72.23:0,72,929	1/1:6,15:21:33.10:451,33,0	0/0:35,0:35:99:0,105,1348	0/0:16,0:16:36.12:0,36,467	0/0:28,0:28:75.24:0,75,961	1/1:1,19:20:57.19:808,57,0	0/0:27,0:27:78.25:0,78,1001	0/0:18,0:18:54.18:0,54,701	0/0:30,0:30:90.29:0,90,1168	0/0:34,0:34:99:0,99,1269	0/0:33,0:33:96.30:0,96,1232	0/0:41,0:41:99:0,120,1544	0/0:23,0:23:69.21:0,69,881	0/0:33,0:33:93.30:0,93,1208	0/0:18,0:18:51.14:0,51,643	0/0:20,0:20:60.19:0,60,766	0/0:31,0:31:90.29:0,90,1167	0/0:20,0:20:57.19:0,57,740	0/0:29,0:29:81.26:0,81,1051	0/0:23,0:23:69.22:0,69,894	0/0:24,0:24:66.21:0,66,854	0/0:26,0:26:75.24:0,75,974	0/0:32,0:32:93.29:0,93,1186	0/0:35,0:35:99:0,105,1361	0/0:9,0:9:27.04:0,27,316
chr10_random	239280	.	C	CAA	1586.20	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.604;DP=724;FS=0.000;HRun=0;HaplotypeScore=92.5510;InbreedingCoeff=0.9977;MQ=85.19;MQ0=0;MQRankSum=-9.247;QD=42.87;ReadPosRankSum=0.642;VQSLOD=5.1503;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	0/0:22,0:22:63.18:0,63,973	0/0:11,0:11:33.11:0,33,538	0/0:39,0:39:99:0,117,1868	0/0:24,0:24:72.18:0,72,1070	1/1:0,16:16:39.13:665,39,0	0/0:38,0:38:99:0,108,1731	0/0:17,0:17:42.14:0,42,678	0/0:27,0:27:75.25:0,75,1203	1/1:1,20:21:60.15:1043,60,0	0/0:27,0:27:81.26:0,81,1277	0/0:20,0:20:54.16:0,54,833	0/0:31,0:31:93.27:0,93,1421	0/0:35,0:35:99:0,102,1635	0/0:33,0:33:93.30:0,93,1493	0/0:42,0:42:99:0,126,1949	0/0:22,0:22:66.21:0,66,1053	0/0:33,0:33:99:0,99,1598	0/0:17,0:17:51.17:0,51,824	0/0:19,0:19:54.17:0,54,858	0/0:32,0:32:90.29:0,90,1442	0/0:21,0:21:60.20:0,60,976	0/0:29,0:29:87.30:0,87,1411	0/0:24,0:24:69.20:0,69,1076	0/0:23,0:23:69.22:0,69,1097	0/0:25,0:25:75.23:0,75,1198	0/0:32,0:32:93.31:0,93,1493	0/0:36,0:36:99:0,108,1701	0/0:8,0:8:21.07:0,21,342
chr10_random	239544	.	GA	G	1757.96	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.850;DP=765;FS=6.497;HRun=1;HaplotypeScore=80.9470;InbreedingCoeff=1.0000;MQ=90.74;MQ0=0;MQRankSum=-3.588;QD=35.88;ReadPosRankSum=0.002;VQSLOD=3.5104;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,2159	0/0:13,0:13:39.13:0,39,623	0/0:29,0:29:87.26:0,87,1323	0/0:31,0:31:84.48:0,84,1342	1/1:1,20:21:51.17:708,51,0	0/0:28,0:28:81.26:0,81,1272	0/0:33,0:33:99:0,99,1559	0/0:26,0:26:78.26:0,78,1218	1/1:2,26:28:84.28:1172,84,0	0/0:34,0:34:96.32:0,96,1514	0/0:20,0:20:54.18:0,54,858	0/0:35,0:35:99:0,105,1657	0/0:32,0:32:96.31:0,96,1511	0/0:26,0:26:78.27:0,78,1244	0/0:24,0:24:72.23:0,72,1126	0/0:30,0:30:87.30:0,87,1391	0/0:33,0:33:99:0,99,1557	0/0:23,0:23:66.14:0,66,987	0/0:20,0:20:60.19:0,60,916	0/0:28,0:28:81.28:0,81,1295	0/0:51,0:51:99:0,154,2444	0/0:23,0:23:66.22:0,66,1055	0/0:15,0:15:45.15:0,45,720	0/0:32,0:32:96.33:0,96,1535	0/0:19,0:19:54.17:0,54,831	0/0:27,0:27:81.26:0,81,1242	0/0:23,0:22:69.24:0,69,1100	0/0:16,0:16:48.16:0,48,767
chr10_random	239599	.	T	TG	1726.91	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.519;DP=777;FS=3.675;HRun=1;HaplotypeScore=88.0934;InbreedingCoeff=0.9999;MQ=81.46;MQ0=0;MQRankSum=-3.799;QD=37.54;ReadPosRankSum=1.699;VQSLOD=4.2331;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,150,1900	0/0:21,0:21:60.19:0,60,779	0/0:23,0:23:60.17:0,60,732	0/0:20,0:20:54.14:0,54,656	1/1:1,17:18:48.16:701,48,0	0/0:27,0:27:75.24:0,75,962	0/0:32,0:32:93.26:0,93,1153	0/0:26,0:26:75.23:0,75,950	1/1:1,27:28:78.26:1148,78,0	0/0:25,0:25:75.23:0,75,952	0/0:19,0:19:57.02:0,57,714	0/0:23,0:23:66.21:0,66,856	0/0:40,0:40:99:0,120,1543	0/0:24,0:24:72.23:0,72,935	0/0:39,0:39:99:0,114,1466	0/0:28,0:27:81.25:0,81,1036	0/0:38,0:38:99:0,102,1307	0/0:29,0:29:87.28:0,87,1129	0/0:16,0:16:45.14:0,45,571	0/0:31,0:31:87.26:0,87,1101	0/0:53,0:53:99:0,156,2011	0/0:21,0:21:60.17:0,60,753	0/0:21,0:21:54.14:0,54,660	0/0:29,0:29:81.22:0,81,1032	0/0:26,0:26:66.20:0,66,843	0/0:27,0:27:75.24:0,75,961	0/0:26,0:26:78.25:0,78,1013	0/0:11,0:11:33.11:0,33,428
chr10_random	239743	.	GCTA	G	1132.57	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.418;DP=714;FS=1.745;HRun=0;HaplotypeScore=98.0929;InbreedingCoeff=0.9939;MQ=82.97;MQ0=1;MQRankSum=-2.514;QD=43.56;ReadPosRankSum=1.489;VQSLOD=5.1652;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,2435	0/0:7,0:7:21.07:0,21,517	0/0:25,0:25:72.23:0,72,1625	0/0:16,0:16:45.07:0,45,1052	0/0:23,0:23:63.22:0,63,1546	0/0:24,0:24:69.24:0,69,1701	0/0:24,0:24:72.25:0,72,1771	0/0:37,0:37:99:0,111,2653	1/1:0,26:26:66.23:1227,66,0	0/0:32,0:32:93.32:0,93,2240	0/0:14,0:14:39.13:0,39,955	0/0:24,0:24:72.25:0,72,1772	0/0:34,0:34:99:0,99,2379	0/0:29,0:29:87.30:0,87,2111	0/0:37,0:37:99:0,111,2727	0/0:34,0:34:99:0,102,2511	0/0:31,0:31:93.32:0,93,2287	0/0:23,0:23:69.24:0,69,1699	0/0:18,0:18:54.17:0,54,1273	0/0:25,0:25:66.21:0,66,1575	0/0:28,0:26:81.25:0,81,1944	0/0:25,0:25:72.25:0,72,1744	0/0:16,0:16:48.15:0,48,1131	0/0:34,0:34:99:0,102,2513	0/0:26,0:26:72.25:0,72,1770	0/0:30,0:30:90.30:0,90,2165	0/0:30,0:30:90.29:0,90,2157	0/0:8,0:8:24.08:0,24,591
chr10_random	240822	.	T	TAAGA	1104.61	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.584;DP=488;FS=0.000;HRun=0;HaplotypeScore=86.5754;InbreedingCoeff=0.7714;MQ=88.64;MQ0=0;MQRankSum=-2.015;QD=58.14;ReadPosRankSum=1.952;VQSLOD=5.2492;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	0/0:33,0:33:90.31:0,90,1663	0/0:4,0:4:12.04:0,12,224	0/0:18,0:18:39.08:0,39,625	0/0:22,0:22:54.17:0,54,857	0/0:10,0:10:21.07:0,21,392	0/0:15,0:14:39.13:0,39,728	0/0:23,0:23:63.20:0,63,1144	0/0:30,0:30:78.27:0,78,1448	1/1:1,17:19:45.15:1199,45,0	0/0:20,0:20:54.17:0,54,955	0/0:2,0:2:6.02:0,6,112	0/0:23,0:23:63.22:0,63,1163	0/0:23,0:23:63.22:0,63,1147	0/0:21,0:21:57.20:0,57,1050	0/0:16,0:16:48.15:0,48,864	0/0:19,0:19:51.17:0,51,952	0/0:21,0:21:63.22:0,63,1176	0/0:15,0:15:36.12:0,36,672	0/0:15,0:15:42.14:0,42,784	0/0:11,0:11:30.10:0,30,560	0/0:29,0:29:72.23:0,72,1310	0/0:5,0:5:12.04:0,12,224	0/0:3,0:3:6.02:0,6,112	0/0:28,0:28:78.27:0,78,1448	0/0:7,0:7:15.05:0,15,280	0/0:16,0:16:39.13:0,39,728	0/0:29,0:29:81.28:0,81,1491	0/0:11,0:11:33.11:0,33,616
chr10_random	241044	.	G	GA	283.32	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=1.528;DP=272;FS=2.935;HRun=8;HaplotypeScore=36.2568;InbreedingCoeff=0.6232;MQ=79.86;MQ0=3;MQRankSum=0.214;QD=6.44;ReadPosRankSum=-0.869;VQSLOD=-0.3761;culprit=HaplotypeScore;set=inputR	GT:AD:DP:GQ:PL	1/1:10,0:10:8.30:22,8,0	0/0:5,0:5:11.98:0,12,110	./.	0/1:11,0:7:6.20:6,0,21	0/0:17,0:17:39.44:0,39,226	0/0:13,0:13:26.75:0,27,231	0/0:5,0:5:12:0,12,110	0/0:19,0:19:44.97:0,45,402	1/1:6,0:8:11.77:77,12,0	0/0:7,0:7:0.31:0,0,42	1/1:1,0:1:1.55:4,2,0	0/0:6,0:6:12.01:0,12,109	0/0:11,0:11:23.75:0,24,204	0/0:8,0:8:14.74:0,15,121	0/0:8,0:8:18.01:0,18,165	0/0:9,0:9:21.01:0,21,192	0/0:25,0:25:66.03:0,66,603	0/0:13,0:13:35.76:0,36,313	0/0:11,0:13:21.74:0,22,145	0/0:6,0:6:4.55:0,5,64	0/0:4,0:4:8.96:0,9,74	0/0:3,0:3:3:0,3,27	0/0:5,0:5:12:0,12,109	0/0:3,0:3:9:0,9,82	0/0:14,0:14:17.68:0,18,140	1/1:5,9:14:27.08:308,27,0	0/0:16,0:17:29.30:0,29,316	0/0:8,0:8:23.39:0,23,179
chr10_random	241047	.	A	AT	92.98	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=3.527;DP=259;FS=0.000;HRun=0;HaplotypeScore=34.4198;InbreedingCoeff=0.3397;MQ=79.39;MQ0=3;MQRankSum=-0.536;QD=2.91;ReadPosRankSum=-0.097;VQSLOD=2.0940;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	0/0:8,0:8:21:0,21,185	0/0:5,0:5:12.04:0,12,168	0/0:5,0:5:6:0,6,54	0/1:12,0:8:0.20:0,0,67	0/0:18,0:18:45.13:0,45,561	0/0:11,0:11:33.09:0,33,425	0/0:5,0:5:15.04:0,15,194	0/0:19,0:19:57.16:0,57,739	1/1:2,6:8:12.04:156,12,0	0/0:5,0:5:13.58:0,14,145	0/0:1,0:1:3:0,3,27	0/0:5,0:5:12.04:0,12,168	0/0:10,0:10:26.95:0,27,346	0/0:7,0:7:21.05:0,21,259	0/0:8,0:8:21.06:0,21,279	0/0:9,0:9:27.08:0,27,348	0/0:24,0:24:72.22:0,72,972	0/0:13,0:13:36.12:0,36,498	0/0:13,0:13:35.55:0,36,307	0/0:8,0:7:17.99:0,18,174	0/0:4,0:4:12.02:0,12,135	0/0:1,0:1:3.01:0,3,42	0/0:5,0:5:15.04:0,15,194	0/0:3,0:3:9.03:0,9,126	0/0:14,0:14:41.97:0,42,433	0/1:12,0:12:35.66:36,0,53	0/0:17,0:17:50.56:0,51,550	0/0:8,0:8:24.08:0,24,319
chr10_random	241051	.	AAT	A	342.58	PASS	AB=0.922;AC=10;AF=0.185;AN=54;BaseQRankSum=3.354;DP=256;FS=0.833;HRun=0;HaplotypeScore=37.1850;InbreedingCoeff=-0.0506;MQ=77.87;MQ0=4;MQRankSum=-1.228;QD=3.36;ReadPosRankSum=-0.549;VQSLOD=1.5398;culprit=QD;set=inputR	GT:AD:DP:GQ:PL	0/0:1,0:7:17.99:0,18,155	0/1:6,0:6:2.74:3,0,198	./.	0/1:15,0:9:17.91:18,0,20	1/1:4,13:17:12.09:356,12,0	0/1:11,1:12:5.92:6,0,370	0/0:4,0:4:9.03:0,9,143	0/0:20,0:20:36.09:0,36,508	0/0:7,0:7:12:0,12,103	0/0:3,0:6:9:0,9,78	0/0:0,0:1:3:0,3,26	0/0:5,0:5:6.02:0,6,96	0/1:9,2:11:11.96:12,0,283	0/1:5,1:6:23.98:24,0,117	0/0:7,0:7:18.06:0,18,286	0/0:8,0:8:15.05:0,15,233	0/0:23,0:23:54.16:0,54,834	0/1:12,1:13:11.95:12,0,284	0/0:13,0:13:7.10:0,7,237	0/0:8,0:7:15.01:0,15,159	0/0:4,0:4:6.02:0,6,94	0/0:2,0:2:6.01:0,6,73	0/0:4,0:4:6.02:0,6,95	0/0:3,0:3:3.01:0,3,48	0/1:13,1:14:17.96:18,0,183	0/0:10,0:10:18.52:0,19,209	0/0:16,0:16:18.24:0,18,388	0/1:7,0:8:29.22:29,0,207
chr10_random	242375	.	A	AGT	701.70	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=0.315;DP=579;FS=0.787;HRun=0;HaplotypeScore=77.4965;InbreedingCoeff=0.5608;MQ=66.12;MQ0=4;MQRankSum=-2.260;QD=7.02;ReadPosRankSum=-2.312;VQSLOD=2.3678;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	0/0:34,0:34:35.54:0,36,613	0/0:5,0:5:15.04:0,15,176	0/0:26,0:16:14.27:0,14,115	0/1:29,0:20:3.52:4,0,122	1/1:8,15:23:10.02:624,10,0	0/0:18,0:19:47.97:0,48,541	0/0:22,0:23:41.96:0,42,471	0/0:25,0:25:39.11:0,39,450	1/1:4,1:15:21:183,21,0	0/1:15,0:16:13.91:14,0,298	0/0:21,0:22:44.95:0,45,496	0/0:24,0:25:51.66:0,52,692	0/0:22,0:22:60.18:0,60,703	0/0:23,0:23:60:0,60,672	0/0:22,0:22:51.15:0,51,598	0/0:19,0:19:42.12:0,42,492	0/0:32,0:33:66.96:0,67,879	0/1:17,0:17:1.12:1,0,286	0/0:16,0:17:35.94:0,36,401	0/0:13,0:14:29.91:0,30,319	0/0:22,0:24:53.98:0,54,599	0/0:15,0:17:44.78:0,45,473	0/0:22,0:23:14.61:0,15,600	0/0:29,0:29:48.14:0,48,560	0/0:13,0:13:33.10:0,33,387	0/0:17,0:17:33.09:0,33,377	0/0:19,0:19:33.10:0,33,387	0/0:7,0:7:18.04:0,18,200
chr10_random	242745	.	T	TA	1188.01	PASS	AB=0.875;AC=12;AF=0.214;AN=56;BaseQRankSum=-3.438;DP=466;FS=13.783;HRun=13;HaplotypeScore=62.5995;InbreedingCoeff=0.4769;MQ=70.65;MQ0=0;MQRankSum=0.030;QD=8.08;ReadPosRankSum=-2.485;VQSLOD=0.4095;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	1/1:2,13:15:33.03:303,33,0	0/0:10,1:11:8.94:0,9,181	0/0:9,0:7:8.87:0,9,61	0/1:14,0:9:4.40:4,0,28	1/1:9,21:30:50.81:430,51,0	0/0:20,3:23:44.57:0,45,308	0/0:15,1:16:4.86:0,5,178	0/0:30,1:32:49.57:0,50,323	0/0:9,0:9:20.78:0,21,143	1/1:10,12:22:12.45:258,12,0	1/1:4,14:18:30.86:268,31,0	0/0:16,0:16:32.68:0,33,226	0/0:16,0:18:27.80:0,28,176	0/0:12,0:14:0.45:0,0,129	0/0:19,0:19:32.59:0,33,224	0/1:19,4:23:33:33,0,235	0/0:12,1:17:1.96:0,2,133	0/0:19,0:19:26.66:0,27,185	0/0:15,0:15:20.76:0,21,143	0/0:14,0:16:27.85:0,28,177	0/0:10,0:10:17.81:0,18,122	0/0:10,0:10:17.82:0,18,123	0/1:14,3:17:48.11:48,0,117	0/1:6,2:8:9.99:10,0,85	0/0:16,0:16:10:0,10,65	0/0:6,0:23:16.23:0,16,64	0/0:18,0:18:35.53:0,36,246	0/0:8,0:8:11.87:0,12,82
chr10_random	242873	.	GT	G	323.50	PASS	AB=0.958;AC=4;AF=0.071;AN=56;BaseQRankSum=5.972;DP=563;FS=16.147;HRun=11;HaplotypeScore=57.8313;InbreedingCoeff=0.5042;MQ=73.40;MQ0=0;MQRankSum=-0.728;QD=4.31;ReadPosRankSum=-1.140;VQSLOD=-0.1113;culprit=HaplotypeScore;set=inputR	GT:AD:DP:GQ:PL	0/0:21,0:21:54.14:0,54,576	0/0:10,0:10:30.07:0,30,318	0/0:23,0:20:20.81:0,21,179	0/1:9,0:9:4.23:4,0,52	1/1:9,23:33:26.91:416,27,0	0/0:34,2:36:62.44:0,62,853	0/0:20,0:21:56.98:0,57,589	0/1:29,3:33:1.78:2,0,586	0/0:12,1:13:8.44:0,8,295	0/0:18,1:20:32.33:0,32,532	0/0:20,0:21:60.02:0,60,622	0/0:14,0:14:29.91:0,30,301	0/0:18,2:20:23.47:0,23,442	0/0:12,0:12:33.08:0,33,351	0/0:17,1:18:23.59:0,24,436	0/0:22,0:24:59.75:0,60,582	0/0:20,0:20:51.08:0,51,517	0/0:25,0:25:57.14:0,57,607	0/0:12,0:12:18.04:0,18,187	0/0:31,1:33:55.11:0,55,762	0/0:15,0:17:44.95:0,45,462	0/0:11,1:12:5.29:0,5,240	0/0:23,0:26:50.95:0,51,519	0/0:18,0:18:51.06:0,51,523	0/0:14,0:16:44.77:0,45,437	0/0:20,0:23:57.15:0,57,556	0/0:24,0:23:54.13:0,54,573	0/0:9,0:9:27.04:0,27,272
chr10_random	243654	.	T	TGCCATTAC	3003.51	PASS	AB=1.000;AC=13;AF=0.295;AN=44;BaseQRankSum=-2.440;DP=392;FS=0.000;HRun=0;HaplotypeScore=48.1394;InbreedingCoeff=0.6036;MQ=34.25;MQ0=214;MQRankSum=-4.991;QD=38.02;ReadPosRankSum=-1.281;VQSLOD=2.8344;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	1/1:9,4:10:18.06:636,18,0	0/0:11,0:4:12.04:0,12,313	0/0:14,0:1:0:0,0,0	0/0:13,0:3:6.02:0,6,162	1/1:4,5:14:24.08:495,24,0	0/1:16,0:10:0:0,0,0	0/0:22,0:7:12.04:0,12,340	./.	1/1:3,3:7:18.06:662,18,0	1/1:1,6:7:21.07:917,21,0	1/1:0,5:7:12.51:434,13,0	0/0:20,0:7:2.80:0,3,86	0/0:18,0:9:2.91:0,3,86	1/1:13,0:10:0.23:0,0,0	./.	0/0:21,0:6:5.85:0,6,172	./.	./.	0/0:10,0:2:3.01:0,3,51	0/0:18,0:12:30.10:0,30,800	./.	0/0:13,0:9:3.01:0,3,86	0/0:16,0:10:8.95:0,9,226	./.	0/0:15,0:10:0:0,0,0	0/0:16,0:11:27.09:0,27,774	0/0:18,0:9:2.87:0,3,86	0/0:4,0:2:3.01:0,3,86
chr10_random	304757	.	C	CTG	811.07	PASS	AB=0.881;AC=6;AF=0.333;AN=18;BaseQRankSum=-3.337;DP=260;FS=2.493;HRun=0;HaplotypeScore=71.2874;MQ=32.53;MQ0=99;MQRankSum=-0.222;QD=5.07;ReadPosRankSum=-1.625;VQSLOD=2.2220;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	0/0:24,0:19:18.05:0,18,200	./.	./.	0/0:19,0:1:0.47:0,0,1	./.	0/0:20,0:16:24.04:0,24,253	0/0:18,0:15:24.02:0,24,253	0/1:28,0:11:23.91:83,0,24	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/1:27,7:13:9.35:257,0,9	1/1:18,12:24:18.06:272,18,0	0/1:18,14:21:31.93:289,0,32	./.	./.	./.	0/1:33,0:19:2.55:3,0,338	./.	./.	./.
chr10_random	306444	.	TCGATGCTAA	T	2977.57	PASS	AB=0.784;AC=5;AF=0.250;AN=20;BaseQRankSum=9.363;DP=552;FS=13.571;HRun=0;HaplotypeScore=420.9736;InbreedingCoeff=-0.3333;MQ=79.81;MQ0=0;MQRankSum=-7.423;QD=11.86;ReadPosRankSum=-0.286;VQSLOD=0.5005;culprit=QD;set=inputR	GT:AD:DP:GQ:PL	0/0:107,0:107:99:0,310,13710	./.	0/0:57,0:55:99:0,156,5902	0/0:34,0:34:83.64:0,84,3183	./.	0/1:22,9:30:99:706,0,2703	0/1:21,16:37:99:670,0,2738	0/1:38,16:54:99:669,0,4483	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/1:57,13:68:99:675,0,6746	0/0:53,9:56:99:0,153,7194	0/1:47,12:59:99:352,0,5390	./.	./.	./.	0/0:41,0:38:99:0,111,5093	./.	./.	./.
chr10_random	306773	.	C	CT	485.86	PASS	AB=0.802;AC=6;AF=0.375;AN=16;BaseQRankSum=2.362;DP=358;FS=15.964;HRun=4;HaplotypeScore=114.4611;MQ=27.98;MQ0=135;MQRankSum=-2.021;QD=1.94;ReadPosRankSum=-0.024;VQSLOD=-0.6156;culprit=QD;set=inputR	GT:AD:DP:GQ:PL	0/0:38,0:32:32.88:0,33,352	./.	./.	./.	./.	0/1:20,7:17:98.82:99,0,146	0/1:14,6:6:28.93:29,0,90	0/1:31,22:28:99:161,0,525	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/1:50,5:33:96.70:97,0,770	0/1:64,12:46:99:169,0,970	0/1:13,6:14:19.91:20,0,183	./.	./.	./.	0/0:32,0:29:63.18:0,63,714	./.	./.	./.
chr10_random	306834	.	ACTT	A	318.83	PASS	AB=0.816;AC=3;AF=0.150;AN=20;BaseQRankSum=4.817;DP=255;FS=13.810;HRun=0;HaplotypeScore=121.4170;InbreedingCoeff=-0.2050;MQ=39.49;MQ0=40;MQRankSum=-5.289;QD=4.09;ReadPosRankSum=-0.811;VQSLOD=1.7763;culprit=QD;set=inputR	GT:AD:DP:GQ:PL	0/0:18,0:15:39.03:0,39,821	./.	0/0:11,0:3:6.02:0,6,118	0/0:4,0:2:6.02:0,6,117	./.	0/1:21,11:15:99:291,0,264	0/1:11,4:4:92.77:93,0,114	0/1:26,2:20:19.99:20,0,244	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/0:38,0:36:99:0,105,602	0/0:58,3:54:24.30:0,24,597	0/0:8,0:8:20.38:0,20,115	./.	./.	./.	0/0:36,0:28:77.76:0,78,1717	./.	./.	./.
chr10_random	306835	.	CTT	C	3004.83	PASS	AB=1.000;AC=10;AF=0.500;AN=20;BaseQRankSum=2.286;DP=257;FS=0.000;HRun=12;HaplotypeScore=83.2162;InbreedingCoeff=0.5245;MQ=39.28;MQ0=41;MQRankSum=-1.194;QD=16.24;ReadPosRankSum=1.451;VQSLOD=2.7538;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	0/0:16,0:15:36.09:0,36,511	./.	0/0:10,1:3:6.02:0,6,84	0/0:6,0:2:5.99:0,6,66	./.	0/1:20,0:16:43.20:43,0,144	0/1:9,0:4:14.39:14,0,56	1/1:12,17:19:53.90:532,54,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:2,36:36:99:1099,108,0	1/1:13,48:54:99:1216,123,0	1/1:1,7:8:21.02:214,21,0	./.	./.	./.	0/0:31,0:27:68.72:0,69,993	./.	./.	./.
chr10_random	307192	.	GT	G	361.41	PASS	AB=1.000;AC=5;AF=0.278;AN=18;BaseQRankSum=4.515;DP=340;FS=2.489;HRun=2;HaplotypeScore=49.9104;MQ=42.95;MQ0=52;MQRankSum=1.754;QD=4.15;ReadPosRankSum=-0.522;VQSLOD=0.3653;culprit=HaplotypeScore;set=inputR	GT:AD:DP:GQ:PL	0/0:42,0:38:42.04:0,42,554	./.	./.	0/1:24,0:3:9.75:10,0,41	./.	1/1:10,17:16:18.04:220,18,0	1/1:6,30:27:18.06:233,18,0	0/0:28,0:18:54.10:0,54,678	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/0:31,0:16:45.13:0,45,628	0/0:43,0:33:29.12:0,29,482	0/0:66,0:54:27.05:0,27,374	./.	./.	./.	0/0:23,0:19:24.08:0,24,355	./.	./.	./.
chr10_random	307595	.	CAGA	C	792.46	PASS	AB=0.815;AC=5;AF=0.313;AN=16;BaseQRankSum=6.300;DP=332;FS=4.723;HRun=0;HaplotypeScore=98.8928;MQ=33.09;MQ0=77;MQRankSum=0.118;QD=4.28;ReadPosRankSum=2.490;VQSLOD=1.7599;culprit=QD;set=inputR	GT:AD:DP:GQ:PL	0/0:48,0:42:41.88:0,42,1035	./.	./.	./.	./.	0/1:30,14:38:99:434,0,398	0/1:12,5:8:49.67:50,0,68	0/0:22,11:15:11.09:0,11,668	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/1:33,4:29:27.28:27,0,1831	0/1:51,4:46:21.04:21,0,1902	0/1:19,13:29:99:349,0,473	./.	./.	./.	0/0:14,0:14:21.07:0,21,516	./.	./.	./.
chr10_random	307730	.	C	CTT	589.75	PASS	AB=0.763;AC=5;AF=0.313;AN=16;BaseQRankSum=6.000;DP=307;FS=1.338;HRun=0;HaplotypeScore=52.1961;MQ=33.76;MQ0=80;MQRankSum=-1.128;QD=3.39;ReadPosRankSum=-1.571;VQSLOD=1.6913;culprit=QD;set=inputR	GT:AD:DP:GQ:PL	0/0:24,0:18:30.01:0,30,432	./.	./.	./.	./.	0/1:25,14:37:74.01:104,0,74	0/1:11,7:14:30.88:286,0,31	0/1:31,14:16:93.57:94,0,396	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/1:25,4:21:99:100,0,815	0/0:49,2:43:71.92:0,72,1142	0/1:27,13:26:95.19:95,0,198	./.	./.	./.	0/0:21,0:15:21.07:0,21,341	./.	./.	./.
chr10_random	309330	.	GTC	G	231.34	PASS	AB=0.742;AC=2;AF=0.053;AN=38;BaseQRankSum=3.025;DP=509;FS=2.821;HRun=0;HaplotypeScore=43.7631;InbreedingCoeff=-0.1342;MQ=35.54;MQ0=128;MQRankSum=-1.495;QD=3.17;ReadPosRankSum=0.232;VQSLOD=1.3106;culprit=QD;set=inputR	GT:AD:DP:GQ:PL	0/0:37,0:31:51.17:0,51,934	./.	0/0:20,0:3:6.02:0,6,110	0/0:24,0:5:12.04:0,12,218	0/0:3,0:2:3.01:0,3,55	0/1:30,14:31:99:99,0,1015	0/1:18,11:21:99:216,0,397	0/0:58,0:25:69.24:0,69,1259	./.	0/0:6,0:3:9.03:0,9,146	0/0:2,0:2:6.02:0,6,110	0/0:5,0:2:3.01:0,3,55	0/0:7,0:2:3.01:0,3,55	./.	./.	0/0:8,0:1:3.01:0,3,55	./.	0/0:4,0:1:3.01:0,3,55	0/0:39,0:30:81.28:0,81,1452	0/0:84,0:78:99:0,220,4010	0/0:48,0:34:93.32:0,93,1701	./.	./.	./.	0/0:16,0:16:36.12:0,36,660	0/0:8,0:2:6.02:0,6,110	0/0:18,0:11:12.04:0,12,219	./.
chr10_random	309521	.	G	GA	6550.07	PASS	AB=0.821;AC=37;AF=0.661;AN=56;BaseQRankSum=-2.107;DP=697;FS=14.280;HRun=1;HaplotypeScore=53.5533;InbreedingCoeff=0.8476;MQ=49.34;MQ0=96;MQRankSum=-7.759;QD=17.37;ReadPosRankSum=1.306;VQSLOD=3.6509;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	0/0:49,0:48:96.31:0,96,1246	1/1:0,11:10:21.07:314,21,0	0/0:25,0:18:51.11:0,51,639	0/0:21,0:14:42.12:0,42,522	1/1:1,26:22:51.13:738,51,0	0/0:32,5:32:75.24:0,75,974	0/0:18,5:20:10.24:0,10,546	0/1:25,7:22:74.59:75,0,583	1/1:0,23:11:12:155,12,0	1/1:0,16:11:33.11:494,33,0	1/1:0,18:15:27.09:404,27,0	1/1:0,10:7:6.02:90,6,0	1/1:0,21:10:17.97:219,18,0	1/1:0,16:6:5.98:65,6,0	1/1:0,29:15:15.05:224,15,0	1/1:0,17:6:5.52:89,6,0	1/1:0,24:20:39.13:584,39,0	1/1:1,14:8:21.07:315,21,0	0/0:38,0:36:99:0,102,1287	0/0:59,0:52:99:0,123,1594	0/0:39,4:39:87.27:0,87,1114	1/1:1,22:21:51.17:763,51,0	1/1:0,23:18:36.12:538,36,0	1/1:0,22:18:42.14:629,42,0	0/0:25,0:25:69.20:0,69,868	1/1:1,17:8:24.08:360,24,0	1/1:1,26:17:24.06:359,24,0	1/1:0,5:4:9.03:135,9,0
chr10_random	309843	.	A	AC	954.24	PASS	AC=14;AF=0.467;AN=30;BaseQRankSum=7.159;DP=300;FS=16.887;HRun=0;HaplotypeScore=41.5058;InbreedingCoeff=0.8420;MQ=30.69;MQ0=75;MQRankSum=-4.812;QD=20.30;ReadPosRankSum=1.127;VQSLOD=3.4490;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	0/0:47,0:44:60.19:0,60,816	1/1:0,5:5:15.05:196,15,0	./.	0/0:28,0:3:3:0,3,25	1/1:0,7:6:9.03:115,9,0	0/0:22,0:10:24.08:0,24,335	0/0:12,0:5:12.04:0,12,167	0/0:15,0:6:18.02:0,18,224	./.	1/1:1,4:4:9.03:123,9,0	1/1:0,8:8:15.05:194,15,0	./.	./.	./.	./.	./.	./.	./.	0/0:23,0:14:42.14:0,42,585	0/0:34,0:28:60.20:0,60,825	./.	1/1:0,8:7:18.06:233,18,0	1/1:2,10:10:8.26:192,8,0	./.	0/0:20,0:18:27.09:0,27,378	1/1:0,2:1:3.01:41,3,0	./.	./.
chr10_random	309936	.	CAAAT	C	170.71	PASS	AC=8;AF=0.364;AN=22;BaseQRankSum=4.568;DP=211;FS=12.784;HRun=0;HaplotypeScore=54.2886;InbreedingCoeff=0.7536;MQ=51.05;MQ0=16;MQRankSum=-2.813;QD=4.49;ReadPosRankSum=0.149;VQSLOD=0.1967;culprit=QD;set=inputR	GT:AD:DP:GQ:PL	0/0:29,0:26:63.21:0,63,1529	1/1:1,0:1:3.01:45,3,0	0/0:40,0:21:41.37:0,41,780	0/0:30,1:11:26.01:0,26,429	./.	./.	1/1:5,0:1:3.01:31,3,0	0/0:12,0:8:24.05:0,24,385	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/0:9,0:4:12.04:0,12,212	1/1:15,16:23:12.51:167,13,0	0/0:8,0:8:11.62:0,12,94	./.	1/1:1,0:1:3.01:34,3,0	./.	0/0:21,0:21:63.08:0,63,1447	./.	./.	./.
chr10_random	313047	.	GC	G	3052.23	PASS	AB=0.912;AC=44;AF=0.880;AN=50;BaseQRankSum=6.424;DP=203;FS=32.140;HRun=1;HaplotypeScore=50.4447;InbreedingCoeff=0.3339;MQ=61.64;MQ0=60;MQRankSum=-1.334;QD=18.73;ReadPosRankSum=1.716;VQSLOD=2.1020;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	0/0:24,0:21:57.14:0,57,856	1/1:0,2:1:3.01:42,3,0	0/1:14,2:8:21.59:22,0,48	0/1:11,1:8:31.39:31,0,144	1/1:0,8:8:24.08:334,24,0	1/1:3,8:5:12.04:167,12,0	1/1:3,1:1:3.01:42,3,0	1/1:7,4:4:12.04:168,12,0	1/1:0,5:3:9.03:125,9,0	1/1:0,5:4:12.04:168,12,0	1/1:0,2:2:6.02:84,6,0	1/1:0,4:2:6.02:84,6,0	1/1:0,5:4:9.03:125,9,0	1/1:0,4:2:6.02:84,6,0	1/1:0,9:7:21.07:293,21,0	1/1:0,1:1:3.01:42,3,0	./.	./.	1/1:4,10:4:12.04:168,12,0	1/1:2,16:11:33.11:460,33,0	1/1:0,5:4:9.03:126,9,0	1/1:0,6:5:12.04:167,12,0	1/1:0,6:6:15.05:208,15,0	1/1:0,2:2:6.02:84,6,0	0/0:14,0:12:30.10:0,30,478	1/1:0,4:2:6.02:84,6,0	1/1:0,7:3:6.02:84,6,0	./.
chr10_random	409661	.	TG	T	41.64	PASS	AC=2;AF=0.50;AN=4;BaseQRankSum=0.731;DP=8;FS=6.990;HRun=2;HaplotypeScore=94.4660;MQ=30.22;MQ0=1;MQRankSum=-0.731;QD=8.33;ReadPosRankSum=0.731;VQSLOD=0.8774;culprit=HaplotypeScore;set=inputR	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:1,0:1:3.01:0,3,43	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,5:4:12:108,12,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10_random	410264	.	GT	G	215.12	PASS	AB=0.714;AC=5;AF=0.109;AN=46;BaseQRankSum=4.850;DP=405;FS=0.000;HRun=5;HaplotypeScore=44.7445;InbreedingCoeff=0.4508;MQ=21.58;MQ0=134;MQRankSum=-0.434;QD=9.35;ReadPosRankSum=3.271;VQSLOD=-0.2245;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	0/0:16,0:8:5.95:0,6,59	0/0:13,0:9:11.97:0,12,141	./.	./.	./.	0/0:11,0:9:15.02:0,15,184	0/0:9,0:4:5.95:0,6,59	0/0:22,0:5:15.05:0,15,205	0/0:15,0:10:17.99:0,18,222	0/0:30,0:14:36.10:0,36,474	0/0:14,0:9:6.02:0,6,82	0/0:6,0:2:3.01:0,3,41	1/1:1,7:6:18.05:202,18,0	0/0:10,0:6:14.91:0,15,158	0/0:37,0:22:41.88:0,42,481	0/0:33,0:24:33.11:0,33,449	0/0:18,0:8:9.03:0,9,118	0/0:10,0:4:2.94:0,3,18	0/0:8,0:4:6.02:0,6,79	0/0:13,0:10:5.97:0,6,60	0/0:15,0:5:0:0,0,0	./.	0/1:6,4:4:8.93:89,0,9	1/1:2,3:3:3.01:34,3,0	0/0:21,0:11:24.08:0,24,327	0/0:26,0:16:42.12:0,42,553	0/0:18,0:9:20.95:0,21,241	./.
chr10_random	410283	.	T	TT	230.47	PASS	AB=1.000;AC=27;AF=0.794;AN=34;BaseQRankSum=3.283;DP=210;FS=0.000;HRun=0;HaplotypeScore=28.3514;InbreedingCoeff=-0.2237;MQ=19.42;MQ0=80;MQRankSum=1.172;QD=1.38;ReadPosRankSum=3.915;VQSLOD=1.0760;culprit=QD;set=inputR	GT:AD:DP:GQ:PL	./.	1/1:5,0:2:4.41:14,4,0	./.	./.	./.	0/1:7,0:6:4.35:4,0,59	./.	1/1:13,0:1:1.82:5,2,0	0/1:9,0:4:12.20:12,0,25	0/1:19,0:6:12.29:14,0,12	1/1:3,0:2:2.99:24,3,0	1/1:5,0:1:2.84:14,3,0	0/1:7,0:6:20.41:27,0,20	1/1:7,0:3:7.24:25,7,0	1/1:21,0:9:16.30:54,16,0	0/1:18,0:11:27.02:27,0,79	1/1:5,0:3:2.37:8,2,0	./.	./.	./.	./.	./.	1/1:6,0:4:10.20:40,10,0	1/1:3,0:3:2.60:10,3,0	0/1:13,0:8:14.80:36,0,15	0/1:13,0:5:11.33:11,0,25	1/1:12,0:3:4.19:13,4,0	./.
chr10_random	410284	.	G	GT	2441.93	PASS	AC=34;AF=1.000;AN=34;DP=197;FS=0.000;HRun=1;HaplotypeScore=19.6618;InbreedingCoeff=-0.0828;MQ=19.18;MQ0=74;QD=15.17;VQSLOD=2.8768;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	./.	1/1:0,5:2:6.02:90,6,0	./.	./.	./.	1/1:2,5:6:9.03:127,9,0	./.	1/1:1,12:1:3.01:45,3,0	1/1:1,7:4:9.03:135,9,0	1/1:3,15:5:15.05:225,15,0	1/1:2,2:2:3.01:44,3,0	1/1:0,5:1:3.01:45,3,0	1/1:1,6:6:15.05:224,15,0	1/1:0,7:3:9.03:135,9,0	1/1:2,19:9:21.07:314,21,0	1/1:2,15:10:21.07:314,21,0	1/1:0,5:3:3.01:45,3,0	./.	./.	./.	./.	./.	1/1:1,5:4:12.04:172,12,0	1/1:0,2:2:3.01:45,3,0	1/1:1,12:8:21.07:314,21,0	1/1:1,11:4:12:155,12,0	1/1:0,11:2:6.02:90,6,0	./.
chr10_random	411444	.	TA	T	344.50	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=-0.393;DP=213;FS=1.779;HRun=1;HaplotypeScore=102.9128;InbreedingCoeff=0.7915;MQ=47.57;MQ0=1;MQRankSum=0.502;QD=26.50;ReadPosRankSum=-2.010;VQSLOD=3.0669;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	0/0:10,0:10:21.07:0,21,335	0/0:8,0:8:21.07:0,21,335	0/0:2,0:2:6.02:0,6,86	0/0:4,0:2:9.03:0,9,144	0/0:11,0:11:27.09:0,27,430	0/0:11,0:10:21.07:0,21,335	0/0:6,0:6:18.06:0,18,287	1/1:0,7:6:18.06:252,18,0	0/0:7,0:7:21.07:0,21,335	0/0:15,0:15:36.12:0,36,564	0/0:10,0:10:20.38:0,20,368	0/0:4,0:4:12.04:0,12,191	0/0:8,0:8:21.01:0,21,284	0/0:9,0:9:27.09:0,27,430	0/0:8,0:8:21.06:0,21,312	0/0:7,0:7:15.05:0,15,239	1/1:0,6:5:15.05:208,15,0	0/0:3,0:3:9.03:0,9,144	0/0:7,0:5:15.05:0,15,240	0/0:15,0:15:18.05:0,18,264	./.	0/0:6,0:6:18.06:0,18,287	0/0:10,0:10:30.10:0,30,469	0/0:2,0:2:6.02:0,6,86	0/0:9,0:9:24.08:0,24,374	0/0:9,0:9:27.05:0,27,403	0/0:13,0:13:39.13:0,39,622	0/0:6,0:5:18.06:0,18,287
chr10_random	412610	.	GTGTGTA	G	338.76	PASS	AB=0.800;AC=4;AF=0.071;AN=56;BaseQRankSum=2.988;DP=642;FS=2.995;HRun=0;HaplotypeScore=154.8042;InbreedingCoeff=0.5229;MQ=55.36;MQ0=17;MQRankSum=-3.199;QD=6.16;ReadPosRankSum=-3.307;VQSLOD=1.9193;culprit=QD;set=inputR	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,99,2302	0/0:8,0:8:24.05:0,24,570	0/0:26,0:14:38.72:0,39,379	0/1:24,0:11:1.60:2,0,233	0/0:27,0:27:69.12:0,69,1507	0/0:18,0:18:36.79:0,37,1086	0/0:25,0:24:42.13:0,42,1093	1/1:19,0:16:23.63:298,24,0	0/0:22,0:21:47.22:0,47,998	0/0:26,0:26:71.20:0,71,1250	0/0:16,0:16:44.64:0,45,1038	0/0:12,0:12:23.97:0,24,503	0/0:16,0:16:41.32:0,41,849	0/0:15,0:15:42.09:0,42,1009	0/0:27,0:27:75.21:0,75,2101	0/0:19,0:19:45.12:0,45,1104	0/1:4,8:12:35.57:146,0,36	0/0:17,0:17:33.07:0,33,925	0/0:11,0:11:28.29:0,28,406	0/0:26,0:26:68.82:0,69,1191	0/0:67,0:66:99:0,165,3542	0/0:27,0:27:68.14:0,68,1483	0/0:27,0:25:67.68:0,68,1655	0/0:27,0:26:60.09:0,60,1366	0/0:15,0:15:36:0,36,788	0/0:34,0:33:87.68:0,88,1711	0/0:23,0:22:57.47:0,57,966	0/0:12,0:12:33.01:0,33,636
chr10_random	414287	.	GTAAATAAA	G	10235.45	PASS	AC=42;AF=0.875;AN=48;BaseQRankSum=-1.718;DP=430;FS=3.129;HRun=0;HaplotypeScore=124.1504;InbreedingCoeff=0.6767;MQ=56.27;MQ0=1;MQRankSum=-4.460;QD=30.37;ReadPosRankSum=2.136;VQSLOD=4.1725;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	1/1:3,8:11:9.03:229,9,0	1/1:3,6:9:15.05:376,15,0	./.	./.	1/1:10,20:29:41.81:879,42,0	1/1:3,8:11:18.06:458,18,0	1/1:2,8:10:15.05:382,15,0	0/0:22,0:26:27.03:0,27,382	1/1:10,9:19:21.07:535,21,0	1/1:13,13:26:39.09:838,39,0	1/1:15,14:29:39.05:917,39,0	1/1:5,7:12:12.04:305,12,0	1/1:3,1:5:6.02:132,6,0	1/1:10,11:21:27.09:687,27,0	0/0:4,0:4:3.01:0,3,124	1/1:7,3:10:9.03:229,9,0	0/0:6,0:18:32.98:0,33,309	1/1:9,1:10:2.31:75,2,0	1/1:7,8:15:20.98:423,21,0	./.	1/1:3,1:4:3.01:76,3,0	1/1:3,1:4:3.01:76,3,0	1/1:8,20:28:26.92:678,27,0	./.	1/1:7,14:21:33.11:840,33,0	1/1:7,10:17:30.05:706,30,0	1/1:13,18:31:45.08:1087,45,0	1/1:9,5:14:12.04:306,12,0
chr10_random	414293	.	AAATAAATA	A	10311.25	PASS	AB=1.000;AC=41;AF=0.820;AN=50;BaseQRankSum=0.258;DP=391;FS=6.648;HRun=0;HaplotypeScore=116.3690;InbreedingCoeff=0.6213;MQ=52.47;MQ0=1;MQRankSum=-5.156;QD=33.81;ReadPosRankSum=2.968;VQSLOD=4.0321;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	0/1:10,0:10:10.01:217,0,10	1/1:9,0:9:15.05:376,15,0	./.	0/0:5,0:3:0.47:0,0,1	1/1:29,0:28:41.81:879,42,0	1/1:10,0:10:18.06:458,18,0	1/1:10,0:10:15.05:382,15,0	0/0:26,0:25:39.04:0,39,493	1/1:16,0:16:21.07:535,21,0	1/1:23,0:23:39.09:838,39,0	1/1:24,0:24:39.05:917,39,0	1/1:11,0:11:12.04:305,12,0	1/1:7,0:7:14.93:220,15,0	1/1:20,0:20:27.09:687,27,0	0/0:5,0:5:6.01:0,6,151	1/1:7,0:7:9.03:229,9,0	0/0:17,0:17:35.98:0,36,335	1/1:8,0:8:2.31:75,2,0	1/1:10,0:10:20.98:423,21,0	./.	1/1:2,0:2:3.01:76,3,0	1/1:4,0:4:3.01:76,3,0	1/1:27,0:27:26.92:678,27,0	./.	1/1:20,0:20:33.11:840,33,0	1/1:16,0:16:30.05:706,30,0	1/1:29,0:29:45.08:1087,45,0	1/1:13,0:13:12.04:306,12,0
chr10_random	414746	.	CT	C	1278.73	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.124;DP=605;FS=6.242;HRun=3;HaplotypeScore=57.4341;InbreedingCoeff=0.9910;MQ=87.37;MQ0=0;MQRankSum=-3.794;QD=32.79;ReadPosRankSum=-2.060;VQSLOD=3.0799;culprit=HaplotypeScore;set=inputR	GT:AD:DP:GQ:PL	0/0:19,0:19:51.10:0,51,709	0/0:9,0:9:27.09:0,27,388	0/0:25,0:25:59.77:0,60,844	0/0:25,0:25:69.03:0,69,937	0/0:30,0:30:90.29:0,90,1277	0/0:24,0:24:69.22:0,69,977	0/0:18,0:18:54.17:0,54,758	1/1:1,24:25:72.21:880,72,0	0/0:20,0:20:57.19:0,57,821	0/0:35,0:35:99:0,99,1425	0/0:43,0:43:99:0,125,1723	0/0:16,0:16:48.15:0,48,672	0/0:22,0:22:57.16:0,57,784	0/0:10,0:10:30.10:0,30,431	0/0:20,0:20:60.20:0,60,864	0/0:14,0:14:39.13:0,39,561	1/1:0,14:14:42.13:521,42,0	0/0:13,0:13:36.10:0,36,498	0/0:27,0:27:78.22:0,78,1066	0/0:39,0:39:99:0,108,1457	0/0:13,0:13:39.13:0,39,562	0/0:26,0:26:78.22:0,78,1069	0/0:21,0:21:63.21:0,63,907	0/0:5,0:5:15.05:0,15,216	0/0:22,0:22:66.22:0,66,951	0/0:23,0:23:66.22:0,66,951	0/0:26,0:26:78.26:0,78,1123	0/0:21,0:21:63.19:0,63,885
chr10_random	416939	.	A	ATC	1250.71	PASS	AB=0.805;AC=20;AF=0.357;AN=56;BaseQRankSum=6.111;DP=486;FS=2.262;HRun=0;HaplotypeScore=165.1218;InbreedingCoeff=-0.4182;MQ=61.27;MQ0=2;MQRankSum=-4.441;QD=3.76;ReadPosRankSum=-5.581;VQSLOD=0.9796;culprit=QD;set=inputR	GT:AD:DP:GQ:PL	0/1:25,4:29:33.85:34,0,69	0/1:3,0:3:8.37:8,0,10	0/0:11,0:6:9.90:0,10,104	0/0:15,0:10:6.05:0,6,96	0/1:19,5:24:69.97:70,0,78	0/1:16,4:20:29.28:29,0,158	1/1:3,1:4:5.03:31,5,0	0/0:40,0:40:99:0,108,1384	0/1:11,5:16:35.32:35,0,140	0/1:15,7:22:38.70:252,0,39	0/1:23,6:29:15:15,0,189	0/1:10,6:16:32.82:33,0,126	0/1:9,5:14:19.02:19,0,75	0/0:10,3:13:17.61:0,18,117	0/0:14,0:14:42.14:0,42,597	0/1:6,3:9:1.35:1,0,112	0/0:23,0:23:66.20:0,66,910	0/0:10,1:11:18.86:0,19,167	0/1:18,4:21:87.74:211,0,88	0/0:22,0:22:14.53:0,15,82	0/1:8,0:8:16.27:16,0,24	0/1:6,4:10:14.99:15,0,64	0/1:9,8:17:81.19:81,0,92	0/0:3,1:4:2.90:0,3,16	0/1:14,7:21:49.98:50,0,123	0/1:19,2:21:88.55:126,0,89	0/1:28,6:33:99:193,0,119	0/1:6,8:14:20.54:188,0,21
chr10_random	416945	.	A	ATCTC	4300.40	PASS	AB=0.772;AC=17;AF=0.315;AN=54;BaseQRankSum=10.501;DP=510;FS=2.103;HRun=0;HaplotypeScore=179.7288;InbreedingCoeff=-0.5001;MQ=59.91;MQ0=4;MQRankSum=-5.794;QD=12.76;ReadPosRankSum=4.005;VQSLOD=4.6997;culprit=QD;set=inputR	GT:AD:DP:GQ:PL	0/1:24,5:29:56.64:57,0,86	0/1:5,0:5:41.26:56,0,41	0/0:13,0:6:10.44:0,10,193	0/0:16,0:10:10.03:0,10,120	0/1:19,6:25:99:148,0,106	0/1:17,4:21:99:113,0,145	./.	0/0:43,0:43:99:0,125,2202	0/1:9,7:17:77.76:84,0,78	0/1:13,10:23:99:876,0,127	0/1:25,7:32:99:199,0,205	0/1:11,6:17:99:190,0,151	0/1:8,5:13:53.35:78,0,53	0/1:11,4:15:76.44:104,0,76	0/0:14,0:14:42.14:0,42,823	0/0:5,3:8:5.49:0,5,84	0/0:22,0:22:66.12:0,66,1228	0/0:11,1:12:7.90:0,8,208	0/1:20,4:23:99:504,0,148	0/0:29,0:29:15.03:0,15,151	0/0:8,0:8:8.78:0,9,48	0/1:5,5:10:40.60:41,0,135	0/1:9,8:17:71.45:153,0,71	0/0:3,1:4:3.01:0,3,30	0/1:14,8:22:87.85:251,0,88	0/1:16,3:19:99:409,0,158	0/1:23,10:32:99:574,0,183	0/1:5,10:15:24.58:464,0,25
chr10_random	417052	.	G	GCATA	13857.14	PASS	AB=0.751;AC=39;AF=0.722;AN=54;BaseQRankSum=4.888;DP=659;FS=0.000;HRun=0;HaplotypeScore=149.4471;InbreedingCoeff=0.5444;MQ=58.01;MQ0=8;MQRankSum=0.983;QD=25.85;ReadPosRankSum=4.574;VQSLOD=4.5889;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	1/1:19,20:41:23.70:566,24,0	1/1:4,6:10:21.04:447,21,0	0/1:18,0:10:2.48:2,0,82	0/0:21,0:11:4.77:0,5,68	1/1:12,20:33:23.56:699,24,0	0/1:11,18:31:27.38:672,0,27	./.	0/0:36,0:36:99:0,102,1284	1/1:10,21:33:44.18:994,44,0	1/1:7,17:23:41.22:964,41,0	0/1:8,16:24:0.94:674,0,1	0/1:15,4:19:4.20:453,0,4	1/1:4,17:21:23.55:525,24,0	1/1:4,17:22:7.38:812,7,0	0/0:19,0:19:54.17:0,54,894	0/0:17,0:17:33.06:0,33,337	0/0:19,0:19:51.13:0,51,788	1/1:10,2:12:7.11:200,7,0	0/1:11,6:16:7.91:330,0,8	1/1:17,12:29:65.67:1376,66,0	1/1:13,22:37:8.33:821,8,0	1/1:14,12:26:10.78:279,11,0	1/1:5,21:27:35.62:851,36,0	1/1:0,4:4:6.02:142,6,0	1/1:5,19:24:23.57:567,24,0	1/1:7,26:35:77.21:1443,77,0	1/1:10,31:43:38.07:900,38,0	1/1:0,4:4:6.02:142,6,0
chr10_random	418220	.	CATATATATATAT	C	15416.55	PASS	AB=0.652;AC=45;AF=0.865;AN=52;BaseQRankSum=1.889;DP=378;FS=53.201;HRun=0;HaplotypeScore=136.8425;InbreedingCoeff=0.7167;MQ=57.55;MQ0=0;MQRankSum=-5.292;QD=47.00;ReadPosRankSum=3.638;VQSLOD=2.0923;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	1/1:8,10:18:18.06:641,18,0	1/1:2,4:6:9.03:291,9,0	./.	0/0:10,0:8:11.83:0,12,216	1/1:9,9:18:27.09:714,27,0	1/1:4,9:13:18.06:636,18,0	1/1:3,9:12:18.06:607,18,0	0/0:14,0:27:5.44:0,5,185	1/1:5,12:17:24.08:864,24,0	1/1:5,15:20:39.07:1010,39,0	1/1:5,9:14:24.08:652,24,0	1/1:1,8:9:18.06:648,18,0	1/1:2,10:12:21.07:756,21,0	1/1:2,8:10:18.06:648,18,0	0/0:7,0:7:15.05:0,15,766	1/1:3,8:11:15.05:536,15,0	0/1:7,0:15:3.62:4,0,54	./.	1/1:9,4:13:12.04:432,12,0	1/1:12,13:25:45.15:1516,45,0	1/1:2,2:4:6.02:163,6,0	1/1:10,10:20:18.06:614,18,0	1/1:5,13:18:23.99:855,24,0	1/1:5,4:9:3.01:53,3,0	1/1:3,12:15:27.09:972,27,0	1/1:4,13:17:36.12:1220,36,0	1/1:9,13:22:30.10:1047,30,0	1/1:4,6:10:15.05:540,15,0
chr10_random	418221	.	ATATATATATATA	A	15416.55	PASS	AB=1.000;AC=45;AF=0.865;AN=52;BaseQRankSum=1.889;DP=371;FS=53.201;HRun=0;HaplotypeScore=134.5957;InbreedingCoeff=0.7167;MQ=57.63;MQ0=0;MQRankSum=-5.250;QD=47.58;ReadPosRankSum=3.206;VQSLOD=2.4185;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	1/1:18,0:18:18.06:641,18,0	1/1:6,0:6:9.03:291,9,0	./.	0/0:10,0:8:11.83:0,12,216	1/1:17,0:17:27.09:714,27,0	1/1:13,0:13:18.06:636,18,0	1/1:12,0:12:18.06:607,18,0	0/0:25,0:25:5.44:0,5,185	1/1:17,0:17:24.08:864,24,0	1/1:20,0:20:39.07:1010,39,0	1/1:14,0:14:24.08:652,24,0	1/1:9,0:9:18.06:648,18,0	1/1:12,0:12:21.07:756,21,0	1/1:10,0:10:18.06:648,18,0	0/0:6,0:6:15.05:0,15,766	1/1:11,0:11:15.05:536,15,0	0/1:14,0:13:3.62:4,0,54	./.	1/1:13,0:13:12.04:432,12,0	1/1:13,12:25:45.15:1516,45,0	1/1:4,0:4:6.02:163,6,0	1/1:20,0:20:18.06:614,18,0	1/1:18,0:18:23.99:855,24,0	1/1:9,0:9:3.01:53,3,0	1/1:15,0:15:27.09:972,27,0	1/1:17,0:17:36.12:1220,36,0	1/1:20,0:20:30.10:1047,30,0	1/1:10,0:10:15.05:540,15,0
chr10_random	418383	.	A	AT	126.76	PASS	AB=0.927;AC=8;AF=0.143;AN=56;BaseQRankSum=6.809;DP=478;FS=39.400;HRun=0;HaplotypeScore=96.5351;InbreedingCoeff=-0.0429;MQ=43.32;MQ0=6;MQRankSum=-4.911;QD=0.85;ReadPosRankSum=-1.822;VQSLOD=-0.2904;culprit=QD;set=inputR	GT:AD:DP:GQ:PL	0/0:16,0:16:2.88:0,3,41	0/0:15,0:15:17.55:0,18,215	0/0:22,0:13:28.88:0,29,405	0/0:17,0:10:27.08:0,27,349	0/1:18,2:19:1.12:1,0,72	0/0:15,0:15:3.01:0,3,41	0/0:28,1:29:16.94:0,17,227	0/1:25,3:24:99:109,0,618	0/0:18,0:18:12.60:0,13,133	0/1:26,3:28:26.22:26,0,835	0/0:23,1:24:5.82:0,6,83	0/0:9,0:9:5.09:0,5,75	0/0:13,0:13:16.72:0,17,193	0/0:7,0:7:2.04:0,2,6	1/1:15,0:15:2.04:6,2,0	0/0:14,0:14:9.97:0,10,120	0/0:12,0:12:2.82:0,3,237	0/0:2,0:2:6.02:0,6,83	0/1:15,1:17:84.83:85,0,220	0/0:30,0:30:21.07:0,21,285	0/0:6,0:5:5.89:0,6,82	0/0:24,0:24:8.57:0,9,123	0/0:17,0:16:2.87:0,3,40	0/0:10,0:10:6.02:0,6,82	0/1:22,0:21:5.56:6,0,37	0/1:17,1:17:0.43:0,0,472	0/0:21,0:21:28.07:0,28,406	0/0:8,0:8:21.07:0,21,275
chr10_random	418403	.	A	AT	142.83	PASS	AB=0.961;AC=18;AF=0.409;AN=44;BaseQRankSum=3.371;DP=341;FS=7.450;HRun=0;HaplotypeScore=70.7292;InbreedingCoeff=0.0595;MQ=31.58;MQ0=2;MQRankSum=0.228;QD=0.72;ReadPosRankSum=-0.152;VQSLOD=0.6684;culprit=QD;set=inputR	GT:AD:DP:GQ:PL	./.	0/0:9,0:9:3.95:0,4,42	./.	./.	0/1:19,0:19:1:1,0,18	1/1:11,0:11:1.55:4,2,0	1/1:24,1:25:2.70:20,3,0	0/1:19,4:20:54.72:55,0,355	0/1:15,0:15:6.84:7,0,13	0/1:17,1:17:14.45:14,0,189	0/1:16,0:16:0:0,0,0	1/1:7,0:7:2.96:20,3,0	0/0:13,0:13:7.35:0,7,72	1/1:4,0:4:2.04:6,2,0	0/0:11,0:11:0:0,0,0	0/0:10,0:10:0.94:0,1,1	0/0:8,0:7:0.02:0,0,89	0/0:3,0:3:2.74:0,3,36	0/1:12,0:12:72.13:91,0,72	./.	./.	0/1:19,0:19:0.17:0,0,0	./.	0/0:9,0:9:2.99:0,3,23	1/1:18,0:17:2.54:13,3,0	0/1:10,0:11:23.90:24,0,142	0/0:13,0:13:10.83:0,11,100	0/0:7,0:7:11.88:0,12,87
chr10_random	465655	.	ACTCT	A	3897.53	PASS	AB=0.749;AC=43;AF=0.768;AN=56;BaseQRankSum=0.465;DP=539;FS=17.188;HRun=0;HaplotypeScore=100.6470;InbreedingCoeff=0.3519;MQ=75.07;MQ0=8;MQRankSum=3.579;QD=10.34;ReadPosRankSum=3.729;VQSLOD=1.5559;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	1/1:24,3:27:21.17:356,21,0	1/1:5,0:5:3:25,3,0	0/0:50,0:28:3.48:0,3,45	0/0:68,0:26:9.96:0,10,87	0/1:11,2:15:0.57:109,0,1	1/1:12,1:14:11.94:114,12,0	1/1:6,2:8:6.02:95,6,0	0/0:31,0:30:14.10:0,14,111	0/1:9,5:14:34.70:174,0,35	1/1:17,5:21:14.06:153,14,0	0/1:5,1:9:3.43:65,0,3	1/1:12,2:15:20.33:230,20,0	1/1:12,4:16:18.05:254,18,0	1/1:9,9:18:20.86:297,21,0	1/1:10,5:17:21.45:277,21,0	1/1:9,5:16:30.07:411,30,0	0/1:8,1:13:17.33:17,0,370	0/0:12,0:13:14.82:0,15,231	1/1:19,3:22:4.31:71,4,0	1/1:17,0:18:3:28,3,0	1/1:15,9:24:21.02:302,21,0	1/1:10,8:18:12.25:144,12,0	1/1:7,3:11:8.90:122,9,0	1/1:8,12:21:8.73:272,9,0	1/1:4,10:15:15.04:217,15,0	1/1:9,2:11:6.49:95,6,0	1/1:20,0:20:3.47:28,3,0	0/1:2,4:6:17.92:41,0,18
chr10_random	465656	.	CTCTCTC	C	907.86	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=4.981;DP=535;FS=9.224;HRun=0;HaplotypeScore=125.9017;InbreedingCoeff=0.1435;MQ=74.97;MQ0=8;MQRankSum=2.877;QD=3.20;ReadPosRankSum=2.881;VQSLOD=1.8974;culprit=QD;set=inputR	GT:AD:DP:GQ:PL	0/0:27,0:27:1.89:0,2,48	0/0:5,0:5:0:0,0,0	0/0:50,0:28:3.48:0,3,64	0/0:70,0:26:10.73:0,11,129	0/1:15,0:15:1.87:2,0,32	0/1:14,0:14:37:44,0,37	1/1:8,0:8:1.77:3,2,0	0/0:32,0:31:28.60:0,29,363	0/1:12,0:12:13.92:14,0,40	0/1:22,0:21:23:54,0,23	0/1:9,0:9:31.54:55,0,32	1/1:15,0:14:12.58:129,13,0	1/1:16,0:16:8.11:72,8,0	0/1:18,0:18:30.24:30,0,74	0/1:17,0:17:28.85:93,0,29	0/1:16,0:16:7:170,0,7	0/0:14,0:14:26.11:0,26,528	0/0:13,0:13:15.04:0,15,339	0/0:22,0:22:4.15:0,4,31	1/1:1,17:18:5.98:83,6,0	1/1:23,0:23:7.91:62,8,0	0/0:18,0:18:4.11:0,4,50	1/1:11,0:11:4.78:64,5,0	0/1:22,0:21:2.25:2,0,30	1/1:15,0:15:8.77:76,9,0	1/1:10,0:10:4.77:29,5,0	1/1:17,0:17:6.01:87,6,0	0/1:6,0:6:1.74:2,0,38
chr10_random	465717	.	GCA	G	474.18	PASS	AB=0.938;AC=15;AF=0.278;AN=54;BaseQRankSum=3.681;DP=516;FS=6.617;HRun=0;HaplotypeScore=89.5022;InbreedingCoeff=-0.2083;MQ=57.03;MQ0=11;MQRankSum=1.277;QD=1.66;ReadPosRankSum=0.260;VQSLOD=0.8414;culprit=QD;set=inputR	GT:AD:DP:GQ:PL	0/1:26,4:29:69.39:69,0,271	0/0:5,0:5:15.04:0,15,206	0/0:21,0:13:3.01:0,3,32	./.	0/1:18,1:21:36.20:36,0,304	0/0:19,1:19:8.76:0,9,511	0/0:13,0:13:3.01:0,3,46	0/0:26,0:24:18.03:0,18,236	0/1:8,0:8:15.05:15,0,205	0/1:14,0:14:18.12:18,0,161	1/1:10,8:19:23.69:226,24,0	0/1:11,2:13:42.25:42,0,243	0/0:17,1:18:2.99:0,3,459	0/0:12,0:12:21.07:0,21,316	0/1:19,0:19:3.01:3,0,364	0/1:22,2:24:18.17:18,0,569	0/0:9,0:18:11.97:0,12,98	0/0:6,0:6:8.96:0,9,69	0/0:10,0:10:15.05:0,15,210	0/0:16,0:16:23.91:0,24,352	0/1:26,1:29:99:107,0,423	0/1:15,1:17:9.31:9,0,240	0/1:17,2:18:36.23:36,0,321	0/1:21,1:22:3.07:3,0,369	0/1:24,1:25:1.95:2,0,377	0/0:18,0:19:23.20:0,23,431	0/1:21,3:25:36.22:36,0,672	0/0:8,0:7:18.06:0,18,271
chr10_random	467012	.	A	AT	14469.62	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-9.788;DP=530;FS=0.000;HRun=7;HaplotypeScore=48.3879;InbreedingCoeff=0.9990;MQ=82.82;MQ0=0;MQRankSum=-3.175;QD=30.79;ReadPosRankSum=1.930;VQSLOD=4.9155;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	1/1:3,18:21:54.17:652,54,0	1/1:1,13:14:39.12:471,39,0	0/0:16,0:16:38.84:0,39,342	0/0:14,0:14:35.98:0,36,328	1/1:1,26:27:78.24:933,78,0	1/1:5,25:30:72.22:870,72,0	1/1:3,18:21:45.14:540,45,0	1/1:1,18:19:51.16:616,51,0	1/1:0,9:9:27.08:326,27,0	1/1:5,19:24:60.18:721,60,0	1/1:3,15:18:45.10:527,45,0	1/1:1,15:16:48.15:579,48,0	1/1:5,22:27:54.17:653,54,0	1/1:1,15:16:45.14:544,45,0	1/1:2,21:23:60.18:725,60,0	1/1:3,10:13:30.09:362,30,0	0/0:15,0:15:42.07:0,42,406	0/0:15,0:15:45:0,45,417	1/1:3,24:27:72.20:847,72,0	1/1:0,0:24:66.13:763,66,0	1/1:0,10:10:27.08:326,27,0	1/1:0,17:17:45.14:539,45,0	1/1:4,23:27:63.19:761,63,0	1/1:4,11:15:33.10:399,33,0	1/1:2,20:22:57.17:689,57,0	1/1:2,16:18:48.15:580,48,0	1/1:2,19:21:57.17:685,57,0	1/1:0,11:11:30.09:362,30,0
chr10_random	469638	.	CTG	C	25177.94	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=6.245;DP=659;FS=6.850;HRun=0;HaplotypeScore=89.3798;InbreedingCoeff=0.9991;MQ=92.55;MQ0=0;MQRankSum=-9.649;QD=46.03;ReadPosRankSum=5.942;VQSLOD=6.0209;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	1/1:0,46:46:99:2003,123,0	1/1:0,8:8:24.08:391,24,0	0/0:29,0:29:84.15:0,84,1646	0/0:27,0:27:78.27:0,78,1498	1/1:0,22:22:60.20:978,60,0	1/1:0,15:15:39.13:635,39,0	1/1:0,30:30:84.29:1369,84,0	1/1:0,17:17:51.17:820,51,0	1/1:0,22:22:63.22:1027,63,0	1/1:0,18:18:54.18:880,54,0	1/1:0,26:26:75.26:1219,75,0	1/1:0,27:27:75.26:1220,75,0	1/1:0,25:25:72.25:1164,72,0	1/1:0,22:22:63.22:1026,63,0	1/1:0,27:27:75.26:1221,75,0	1/1:0,27:27:78.27:1272,78,0	0/0:37,0:36:99:0,111,2203	0/0:19,0:19:57.20:0,57,1157	1/1:0,24:24:69.24:1118,69,0	1/1:1,22:23:66.23:1076,66,0	1/1:0,31:31:90.31:1455,90,0	1/1:0,17:17:51.17:830,51,0	1/1:0,16:16:36.02:587,36,0	1/1:0,30:30:84.29:1370,84,0	1/1:0,17:17:51.17:832,51,0	1/1:0,15:15:42.14:685,42,0	1/1:0,33:33:96.33:1561,96,0	1/1:0,9:9:27.09:440,27,0
chr10_random	470658	.	CC	C	6708.40	PASS	AB=0.875;AC=44;AF=0.786;AN=56;BaseQRankSum=15.902;DP=698;FS=7.750;HRun=2;HaplotypeScore=248.3396;InbreedingCoeff=0.6131;MQ=75.58;MQ0=0;MQRankSum=-6.154;QD=10.89;ReadPosRankSum=4.457;VQSLOD=3.1095;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	1/1:46,0:46:99:577,111,0	1/1:12,0:12:28.19:145,28,0	0/0:16,0:16:48.14:0,48,663	0/0:20,0:20:60.03:0,60,815	1/1:27,0:27:51.06:257,51,0	1/1:26,0:25:41.19:317,41,0	1/1:26,0:26:37.47:282,37,0	0/1:31,0:31:8.93:319,0,9	1/1:27,0:27:46.50:301,47,0	1/1:27,0:27:50.42:278,50,0	0/1:13,0:13:0.45:81,0,0	1/1:28,0:28:51.33:346,51,0	1/1:27,0:27:50.86:337,51,0	1/1:32,0:32:84.70:421,85,0	1/1:35,0:35:78.54:381,79,0	1/1:22,0:22:55.89:266,56,0	0/0:28,0:28:84.28:0,84,1208	0/0:18,0:18:54.18:0,54,776	0/1:19,0:19:58.96:167,0,59	0/1:0,24:24:12.34:212,0,12	1/1:32,0:32:53.57:324,54,0	1/1:24,0:24:20.53:181,21,0	1/1:13,0:13:6.70:132,7,0	1/1:33,0:33:30.48:293,30,0	1/1:22,0:22:39.54:201,40,0	1/1:25,0:25:46.72:285,47,0	1/1:34,0:34:85.73:452,86,0	1/1:11,0:11:31.20:154,31,0
chr10_random	470660	.	CT	C	19546.24	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=13.906;DP=693;FS=1.387;HRun=2;HaplotypeScore=200.2085;InbreedingCoeff=0.9993;MQ=77.54;MQ0=0;MQRankSum=-6.259;QD=32.15;ReadPosRankSum=1.315;VQSLOD=4.3338;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	1/1:1,44:45:99:1517,117,0	1/1:0,12:12:30.10:389,30,0	0/0:17,0:17:51.17:0,51,728	0/0:22,0:22:66.11:0,66,888	1/1:1,25:26:57.12:718,57,0	1/1:1,25:26:66.21:855,66,0	1/1:2,24:26:63.20:817,63,0	1/1:2,29:31:84.25:1058,84,0	1/1:1,25:26:72.23:934,72,0	1/1:1,26:27:78.24:998,78,0	1/1:1,12:13:27.05:331,27,0	1/1:1,28:29:78.25:1011,78,0	1/1:1,25:26:69.22:894,69,0	1/1:0,31:31:90.29:1167,90,0	1/1:0,34:34:87.22:1108,87,0	1/1:0,22:22:60.20:778,60,0	0/0:28,0:28:84.28:0,84,1258	0/0:18,0:18:54.18:0,54,809	1/1:7,11:18:39.12:488,39,0	1/1:24,0:24:39.13:504,39,0	1/1:1,32:33:75.24:972,75,0	1/1:2,22:24:45.15:584,45,0	1/1:1,11:12:30.10:389,30,0	1/1:1,29:30:75.24:972,75,0	1/1:0,22:22:42.14:545,42,0	1/1:1,24:25:72.22:921,72,0	1/1:0,35:35:90.29:1166,90,0	1/1:0,11:11:33.11:428,33,0
chr10_random	471026	.	G	GC	23639.17	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=7.890;DP=688;FS=9.683;HRun=1;HaplotypeScore=123.3856;InbreedingCoeff=0.9913;MQ=85.71;MQ0=0;MQRankSum=-7.522;QD=39.73;ReadPosRankSum=5.615;VQSLOD=3.3262;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	1/1:3,45:48:99:1978,132,0	1/1:1,13:14:39.13:574,39,0	0/0:30,0:30:84.21:0,84,1016	0/0:21,0:21:48.10:0,48,683	1/1:1,26:27:72.16:1043,72,0	1/1:0,28:28:75.25:1124,75,0	1/1:0,18:18:51.17:764,51,0	1/1:3,24:27:72.22:1039,72,0	1/1:0,13:13:36.12:540,36,0	1/1:0,26:26:78.26:1162,78,0	1/1:0,19:19:51.17:751,51,0	1/1:1,18:19:57.19:846,57,0	1/1:1,24:26:72.24:1072,72,0	1/1:2,28:30:75.25:1124,75,0	1/1:0,29:29:75.25:1124,75,0	1/1:0,30:30:84.28:1259,84,0	0/0:31,0:31:93.28:0,93,1191	0/0:11,0:11:33.07:0,33,394	1/1:1,21:22:63.19:921,63,0	1/1:2,0:34:45.15:662,45,0	1/1:1,22:23:63.21:944,63,0	1/1:0,31:31:84.28:1250,84,0	1/1:1,22:23:66.22:988,66,0	1/1:0,23:23:63.21:944,63,0	1/1:1,16:17:48.12:687,48,0	1/1:3,33:36:99:1498,102,0	1/1:2,26:28:78.26:1165,78,0	1/1:0,4:4:12.04:180,12,0
chr10_random	471286	.	G	GAA	19413.47	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-2.244;DP=636;FS=0.562;HRun=9;HaplotypeScore=110.9990;InbreedingCoeff=0.9914;MQ=70.28;MQ0=1;MQRankSum=-3.322;QD=33.70;ReadPosRankSum=2.243;VQSLOD=4.4982;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	1/1:3,13:17:33.11:477,33,0	1/1:1,9:11:27.06:390,27,0	0/0:16,0:16:33.01:0,33,351	0/0:11,0:11:18.01:0,18,187	1/1:1,19:21:57.12:825,57,0	1/1:6,26:32:72.24:1102,72,0	1/1:5,15:23:41.62:591,42,0	1/1:9,15:26:50.13:688,50,0	1/1:2,21:24:54.11:774,54,0	1/1:6,25:30:81.25:1204,81,0	1/1:2,15:21:49.62:655,50,0	1/1:2,16:18:19.21:682,19,0	1/1:10,23:34:65.68:953,66,0	1/1:5,20:25:66.18:960,66,0	1/1:6,15:23:54.17:779,54,0	1/1:3,18:22:62.70:915,63,0	0/0:23,0:24:65.90:0,66,682	0/0:9,0:8:21.04:0,21,223	1/1:6,9:15:24.94:455,25,0	1/1:10,25:35:55.29:1209,55,0	1/1:0,15:19:44.12:598,44,0	1/1:4,25:30:75.21:1092,75,0	1/1:5,26:32:65.71:978,66,0	1/1:1,8:10:27.09:398,27,0	1/1:4,21:26:60.93:889,61,0	1/1:5,22:29:65.70:961,66,0	1/1:8,34:43:99:1568,108,0	1/1:4,5:9:18.06:270,18,0
chr10_random	471287	.	A	AAA	19479.48	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-2.251;DP=640;FS=1.180;HRun=8;HaplotypeScore=115.4727;InbreedingCoeff=0.9918;MQ=70.03;MQ0=1;MQRankSum=-3.380;QD=33.47;ReadPosRankSum=2.074;VQSLOD=4.3043;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	1/1:18,0:18:33.11:478,33,0	1/1:11,0:11:27.06:390,27,0	0/0:16,0:16:33.01:0,33,351	0/0:10,0:10:18.01:0,18,187	1/1:21,0:21:57.12:825,57,0	1/1:32,0:32:72.24:1102,72,0	1/1:23,0:23:41.62:591,42,0	1/1:28,0:28:50.13:688,50,0	1/1:24,0:24:54.11:774,54,0	1/1:32,0:31:81.25:1204,81,0	1/1:22,0:22:49.62:655,50,0	1/1:18,0:18:19.21:682,19,0	1/1:33,0:33:65.68:953,66,0	1/1:25,0:25:66.18:960,66,0	1/1:22,0:22:54.17:779,54,0	1/1:22,0:22:62.70:915,63,0	0/0:23,0:23:65.90:0,66,682	0/0:9,0:8:21.04:0,21,223	1/1:16,0:16:30.91:520,31,0	1/1:29,6:36:55.29:1209,55,0	1/1:19,0:20:44.12:598,44,0	1/1:30,0:30:75.21:1092,75,0	1/1:31,0:31:65.71:978,66,0	1/1:10,0:10:27.09:398,27,0	1/1:26,0:26:60.93:889,61,0	1/1:30,0:30:65.70:961,66,0	1/1:43,0:43:99:1568,108,0	1/1:9,0:9:18.06:270,18,0
chr10_random	471306	.	C	CCA	792.41	PASS	AB=0.846;AC=5;AF=0.089;AN=56;BaseQRankSum=7.586;DP=567;FS=44.633;HRun=0;HaplotypeScore=158.3133;InbreedingCoeff=-0.0988;MQ=79.43;MQ0=1;MQRankSum=-7.380;QD=5.28;ReadPosRankSum=2.412;VQSLOD=1.0733;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	0/0:16,0:16:33.11:0,33,538	0/0:10,0:10:30.08:0,30,462	0/0:19,0:19:51.15:0,51,801	0/0:19,0:19:57.16:0,57,855	0/1:20,9:29:99:266,0,762	0/0:25,0:25:63.04:0,63,1002	0/0:18,0:18:42.13:0,42,659	0/0:16,0:16:48.16:0,48,783	0/0:19,0:19:51.17:0,51,831	0/0:26,0:26:78.27:0,78,1261	0/0:18,1:19:52.42:0,52,831	0/0:16,0:16:45.15:0,45,733	0/0:24,0:24:63.13:0,63,969	0/0:18,0:18:42.14:0,42,685	0/0:17,0:17:45.15:0,45,722	0/0:19,0:19:54.17:0,54,852	0/0:18,0:18:54.18:0,54,881	0/0:7,0:6:18.06:0,18,294	0/0:19,0:19:57.19:0,57,927	0/1:34,7:41:99:290,0,1311	0/0:18,0:18:39.13:0,39,635	0/1:21,4:25:48.13:48,0,915	0/1:24,5:29:99:209,0,995	0/0:7,0:7:21.07:0,21,342	0/1:23,3:26:96.98:97,0,999	0/0:25,1:26:24.34:0,24,1159	0/0:34,0:34:96.33:0,96,1554	0/0:7,0:7:21.07:0,21,342
chr10_random	472489	.	TG	T	18957.15	PASS	AB=0.806;AC=55;AF=0.982;AN=56;BaseQRankSum=-3.640;DP=559;FS=10.345;HRun=1;HaplotypeScore=111.2662;InbreedingCoeff=-0.0205;MQ=78.11;MQ0=0;MQRankSum=-3.879;QD=33.91;ReadPosRankSum=3.393;VQSLOD=3.6802;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	1/1:0,30:30:81.26:1051,81,0	1/1:0,11:11:33.06:409,33,0	1/1:11,8:19:48.51:585,49,0	0/1:22,7:28:99:571,0,109	1/1:1,14:15:39.12:500,39,0	1/1:0,25:25:72.23:934,72,0	1/1:0,22:21:63.20:817,63,0	1/1:0,36:36:99:1403,108,0	1/1:0,18:18:54.18:701,54,0	1/1:0,20:20:57.19:740,57,0	1/1:0,21:21:51.17:661,51,0	1/1:0,28:28:75.24:973,75,0	1/1:0,19:19:51.11:661,51,0	1/1:0,20:20:60.20:779,60,0	1/1:0,20:20:54.18:700,54,0	1/1:0,22:22:63.20:817,63,0	1/1:0,14:14:39.13:506,39,0	1/1:0,8:8:24.08:312,24,0	1/1:0,16:16:48.16:623,48,0	1/1:0,20:20:8.73:116,9,0	1/1:0,20:20:48.16:623,48,0	1/1:0,19:19:54.18:700,54,0	1/1:0,15:15:39.13:505,39,0	1/1:0,24:24:57.19:740,57,0	1/1:0,23:23:63.20:817,63,0	1/1:1,21:22:63.20:818,63,0	1/1:0,13:13:39.13:506,39,0	1/1:0,10:10:30.10:389,30,0
chr10_random	472490	.	GA	G	18888	PASS	AB=0.879;AC=55;AF=0.982;AN=56;BaseQRankSum=-4.455;DP=572;FS=21.423;HRun=1;HaplotypeScore=113.6000;InbreedingCoeff=-0.0205;MQ=78.29;MQ0=0;MQRankSum=-4.743;QD=33.02;ReadPosRankSum=3.907;VQSLOD=3.1586;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	1/1:32,0:32:81.26:1051,81,0	1/1:11,0:11:33.06:409,33,0	1/1:15,5:20:44.63:562,45,0	0/1:25,4:29:99:526,0,115	1/1:15,0:15:39.12:500,39,0	1/1:25,0:25:72.23:934,72,0	1/1:22,0:21:63.20:817,63,0	1/1:37,0:37:99:1403,108,0	1/1:18,0:18:54.18:701,54,0	1/1:20,0:20:57.19:740,57,0	1/1:21,0:21:51.17:661,51,0	1/1:28,0:28:75.24:973,75,0	1/1:20,0:20:51.11:661,51,0	1/1:21,0:21:60.20:779,60,0	1/1:20,0:20:54.18:700,54,0	1/1:23,0:23:63.20:817,63,0	1/1:14,0:14:39.13:506,39,0	1/1:8,0:8:24.08:312,24,0	1/1:17,0:17:48.16:623,48,0	1/1:20,0:20:8.73:116,9,0	1/1:22,0:22:48.16:623,48,0	1/1:19,0:19:54.18:700,54,0	1/1:15,0:15:39.13:505,39,0	1/1:25,0:25:57.19:740,57,0	1/1:23,0:23:63.20:817,63,0	1/1:23,0:23:63.20:818,63,0	1/1:14,0:14:39.13:506,39,0	1/1:10,0:10:30.10:389,30,0
chr10_random	472491	.	AT	A	7485.53	PASS	AB=0.967;AC=51;AF=0.911;AN=56;BaseQRankSum=4.657;DP=586;FS=0.000;HRun=1;HaplotypeScore=154.6991;InbreedingCoeff=-0.1047;MQ=78.45;MQ0=0;MQRankSum=-5.504;QD=12.77;ReadPosRankSum=8.410;VQSLOD=3.1842;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	1/1:33,0:33:56.30:425,56,0	1/1:11,0:11:29.49:172,29,0	0/1:20,1:21:37.60:165,0,38	0/1:25,4:29:95.83:252,0,96	1/1:15,0:15:37.43:210,37,0	1/1:25,0:25:70.31:444,70,0	1/1:22,0:21:60.55:346,61,0	1/1:38,0:38:48.80:341,49,0	1/1:19,0:19:52.29:311,52,0	1/1:20,0:20:52.16:250,52,0	1/1:21,0:21:34.63:289,35,0	1/1:29,0:29:50.74:418,51,0	1/1:21,0:21:5.69:259,6,0	1/1:21,0:21:57.48:323,57,0	1/1:20,0:20:52.78:334,53,0	0/1:25,0:25:5.25:319,0,5	1/1:14,0:14:38.14:237,38,0	1/1:8,0:8:23.01:124,23,0	1/1:17,0:17:19.58:184,20,0	0/1:22,0:22:46.01:46,0,52	1/1:22,0:22:1.80:187,2,0	1/1:20,0:20:52.27:312,52,0	1/1:16,0:16:37.82:225,38,0	1/1:26,0:26:32.87:283,33,0	1/1:23,0:23:61.01:369,61,0	0/1:24,0:24:9.88:230,0,10	1/1:14,0:14:38.32:249,38,0	1/1:10,0:10:29.34:181,29,0
chr10_random	472771	.	GAGAGAGGC	G	5847.28	PASS	AB=0.981;AC=25;AF=0.446;AN=56;BaseQRankSum=-2.199;DP=645;FS=77.743;HRun=0;HaplotypeScore=216.0932;InbreedingCoeff=-0.8261;MQ=59.90;MQ0=6;MQRankSum=0.705;QD=9.79;ReadPosRankSum=-2.496;VQSLOD=0.2320;culprit=QD;set=inputR	GT:AD:DP:GQ:PL	0/1:34,0:33:99:277,0,326	0/1:12,0:12:87.93:97,0,88	0/0:16,0:14:39.42:0,39,677	0/0:20,0:19:35.97:0,36,697	0/1:28,0:28:93.43:418,0,93	0/1:33,0:32:99:289,0,467	0/1:27,0:26:99:206,0,275	0/1:29,0:29:99:459,0,206	0/1:28,0:27:99:221,0,566	0/1:34,0:34:99:492,0,393	0/1:22,0:22:69.79:312,0,70	0/1:21,0:21:59.13:59,0,686	0/1:27,0:25:99:125,0,757	0/1:22,0:22:99:181,0,612	0/1:25,0:23:99:167,0,516	0/1:14,0:14:99:118,0,149	0/1:4,26:30:55.94:155,0,56	0/1:18,0:18:34.09:276,0,34	0/1:22,0:22:81.65:371,0,82	0/1:16,0:16:99:165,0,128	0/1:25,0:24:99:281,0,144	0/1:22,0:22:99:238,0,299	0/0:12,0:12:3:0,3,49	0/1:23,0:22:99:145,0,644	0/1:29,0:29:99:239,0,392	0/1:24,0:24:99:177,0,636	0/1:21,0:21:99:173,0,466	0/1:11,0:11:32.11:206,0,32
chr10_random	472777	.	GGC	G	10122.27	PASS	AB=0.750;AC=50;AF=0.893;AN=56;BaseQRankSum=2.350;DP=572;FS=15.152;HRun=0;HaplotypeScore=137.2768;InbreedingCoeff=0.7486;MQ=66.98;MQ0=6;MQRankSum=-5.647;QD=19.06;ReadPosRankSum=-0.069;VQSLOD=4.2718;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	1/1:31,0:30:69.19:581,69,0	1/1:10,0:10:23.90:187,24,0	0/0:19,0:17:47.98:0,48,836	0/0:22,0:21:41.21:0,41,759	1/1:25,0:25:70.36:575,70,0	1/1:27,0:26:63.47:538,63,0	1/1:22,0:21:52.72:459,53,0	1/1:27,0:27:62.71:623,63,0	1/1:24,0:24:62.21:512,62,0	1/1:30,0:30:86.90:765,87,0	1/1:18,0:18:47.84:404,48,0	1/1:18,0:19:37.69:303,38,0	1/1:23,0:22:47.88:370,48,0	1/1:15,0:18:53.51:445,54,0	1/1:18,0:17:40.73:331,41,0	1/1:12,0:12:27.75:216,28,0	0/1:29,0:29:19.76:40,0,20	1/1:10,1:11:30.29:224,30,0	1/1:20,0:20:54.46:486,54,0	1/1:15,0:15:35.81:286,36,0	1/1:22,0:21:48.24:378,48,0	1/1:21,0:21:51.74:474,52,0	0/1:0,12:12:0:0,0,0	1/1:17,0:19:38.12:348,38,0	1/1:25,0:25:60.39:485,60,0	1/1:19,0:19:46.74:416,47,0	1/1:19,0:19:51:412,51,0	1/1:11,0:11:32.90:263,33,0
chr10_random	473213	.	GATT	G	531.75	PASS	AB=0.932;AC=13;AF=0.232;AN=56;BaseQRankSum=-0.863;DP=559;FS=27.754;HRun=0;HaplotypeScore=199.9214;InbreedingCoeff=-0.2525;MQ=53.25;MQ0=5;MQRankSum=-5.229;QD=1.81;ReadPosRankSum=-4.680;VQSLOD=-0.0998;culprit=ReadPosRankSum;set=inputR	GT:AD:DP:GQ:PL	0/1:16,0:16:29.93:30,0,52	0/1:10,2:12:66.54:67,0,466	0/0:21,0:10:18.77:0,19,334	0/0:20,0:12:35.90:0,36,634	0/1:19,0:19:0.28:0,0,404	0/0:14,0:14:9.03:0,9,184	0/0:19,0:19:36.07:0,36,642	0/0:35,0:33:99:0,99,1955	0/0:18,0:18:38.92:0,39,664	0/0:22,0:22:57.20:0,57,1096	0/0:16,0:16:1.03:0,1,182	0/1:22,0:22:23.09:23,0,153	0/0:20,6:26:54.07:0,54,969	0/1:21,2:23:99:136,0,671	0/1:18,10:28:99:140,0,543	0/1:29,0:29:16.78:17,0,219	0/0:13,0:13:8.99:0,9,151	0/1:10,0:10:9.48:9,0,151	0/0:10,0:10:27.09:0,27,574	0/0:17,0:17:30.01:0,30,487	0/0:12,0:12:8.78:0,9,147	0/1:20,0:20:13.95:14,0,173	0/1:18,5:23:0.86:1,0,564	0/0:14,3:17:27.09:0,27,563	0/1:27,0:27:4.96:104,0,5	0/1:25,4:28:99:115,0,1383	0/1:32,4:36:18.60:19,0,1380	0/0:5,0:5:15.04:0,15,271
chr10_random	473218	.	T	TAGATAGAC	5801.70	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-1.375;DP=565;FS=15.246;HRun=0;HaplotypeScore=208.9216;InbreedingCoeff=0.1787;MQ=50.95;MQ0=5;MQRankSum=0.960;QD=11.01;ReadPosRankSum=3.095;VQSLOD=2.6757;culprit=QD;set=inputR	GT:AD:DP:GQ:PL	0/1:17,0:17:0.45:105,0,0	1/1:13,0:13:9.85:159,10,0	0/0:19,0:8:5.99:0,6,52	0/0:19,0:11:26.26:0,26,210	1/1:19,0:19:16.97:301,17,0	1/1:5,9:15:3.01:111,3,0	1/1:18,0:18:29.71:239,30,0	1/1:41,0:38:85.51:604,86,0	1/1:17,0:17:35.75:290,36,0	1/1:22,0:22:48.57:704,49,0	1/1:15,0:15:7.84:223,8,0	1/1:21,0:21:6.02:174,6,0	1/1:27,0:27:41.25:287,41,0	0/1:23,0:23:99:193,0,132	1/1:24,0:24:19.96:138,20,0	1/1:27,0:27:6.02:173,6,0	1/1:13,0:13:6.01:63,6,0	0/1:8,0:8:5.80:26,0,6	1/1:12,0:12:11.29:211,11,0	1/1:23,0:23:14.67:88,15,0	1/1:14,0:14:2.66:24,3,0	1/1:19,0:19:6.02:203,6,0	1/1:25,0:25:3.02:208,3,0	1/1:15,0:15:1.17:106,1,0	1/1:26,0:26:12.04:275,12,0	1/1:30,0:29:46.44:477,46,0	0/1:38,0:38:10.94:364,0,11	0/1:5,0:5:52.72:55,0,53
chr10_random	473222	.	T	TAGAC	4691.91	PASS	AB=0.954;AC=43;AF=0.768;AN=56;BaseQRankSum=3.638;DP=559;FS=6.971;HRun=0;HaplotypeScore=178.9550;InbreedingCoeff=-0.0424;MQ=49.01;MQ0=7;MQRankSum=0.484;QD=8.95;ReadPosRankSum=5.174;VQSLOD=3.4015;culprit=QD;set=inputR	GT:AD:DP:GQ:PL	0/1:16,0:16:11.80:46,0,12	0/1:13,0:13:33.63:116,0,34	0/0:17,0:6:5.99:0,6,52	0/0:18,0:10:26.26:0,26,210	1/1:18,0:18:20.70:210,21,0	0/1:14,0:14:17.97:46,0,18	1/1:16,0:16:5.23:144,5,0	1/1:46,0:41:21.56:519,22,0	1/1:17,0:17:35.77:517,36,0	1/1:22,0:22:48.57:472,49,0	1/1:15,0:15:7.84:106,8,0	1/1:21,0:21:6.02:104,6,0	1/1:28,0:28:26.27:269,26,0	0/1:24,0:24:99:189,0,132	0/1:24,0:24:2.86:115,0,3	1/1:25,0:25:6.02:104,6,0	1/1:1,12:14:6.02:154,6,0	0/1:3,7:10:11.12:71,0,11	1/1:10,0:10:2.39:140,2,0	1/1:23,0:23:14.67:88,15,0	1/1:12,0:12:2.66:24,3,0	1/1:18,0:18:6.02:101,6,0	1/1:25,0:25:2.48:170,2,0	1/1:13,0:13:1.39:106,1,0	1/1:26,0:26:12.04:170,12,0	0/1:29,0:28:99:345,0,120	0/1:38,0:38:99:317,0,104	0/1:7,0:7:49.10:52,0,49
chr10_random	473223	.	A	AGACAGATGGATG	14239.89	PASS	AB=0.995;AC=47;AF=0.839;AN=56;BaseQRankSum=1.036;DP=587;FS=24.809;HRun=0;HaplotypeScore=194.7847;InbreedingCoeff=0.2072;MQ=47.71;MQ0=7;MQRankSum=-1.297;QD=25.70;ReadPosRankSum=4.763;VQSLOD=2.5108;culprit=QD;set=inputR	GT:AD:DP:GQ:PL	1/1:4,0:19:4.02:118,4,0	1/1:13,0:13:33.03:490,33,0	0/0:16,0:5:6.02:0,6,99	0/0:17,0:9:26.10:0,26,409	1/1:1,14:23:21.07:737,21,0	1/1:13,0:14:8.01:128,8,0	1/1:16,0:16:30.09:527,30,0	1/1:45,0:40:99:1767,107,0	1/1:17,0:17:39.12:636,39,0	1/1:1,0:27:61.90:1300,62,0	1/1:1,0:17:9.03:254,9,0	1/1:1,13:28:6.02:369,6,0	1/1:28,0:28:22.02:830,22,0	0/1:24,0:24:17.19:698,0,17	1/1:24,0:24:12.86:502,13,0	1/1:0,19:30:6.02:370,6,0	1/1:14,0:14:5.91:38,6,0	0/1:9,0:9:13.05:13,0,25	0/1:10,0:10:9.88:419,0,10	1/1:21,0:21:18.02:296,18,0	1/1:12,0:12:6.17:149,6,0	1/1:2,0:22:5.83:188,6,0	1/1:24,1:25:6.24:560,6,0	1/1:13,0:13:20.95:352,21,0	1/1:0,22:30:12.04:686,12,0	1/1:29,0:28:49.85:1450,50,0	0/1:36,1:37:6:1175,0,6	0/1:7,0:7:90.61:188,0,91
chr10_random	473230	.	T	TGG	204.38	PASS	AB=0.971;AC=15;AF=0.268;AN=56;BaseQRankSum=4.913;DP=542;FS=5.276;HRun=0;HaplotypeScore=170.2557;InbreedingCoeff=0.1399;MQ=47.42;MQ0=9;MQRankSum=-2.100;QD=0.98;ReadPosRankSum=0.276;VQSLOD=1.7976;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	0/1:17,0:17:9.44:9,0,77	0/0:12,0:12:27.33:0,27,291	0/0:14,0:3:3.01:0,3,49	0/0:14,0:6:8.18:0,8,162	0/0:21,0:21:10.17:0,10,266	0/1:13,0:13:2.79:3,0,156	0/1:16,0:16:0.52:1,0,118	0/0:43,0:36:68.55:0,69,738	0/1:9,5:14:41.08:147,0,41	0/1:27,0:27:32.28:32,0,294	0/1:13,0:13:23.83:30,0,24	0/1:22,0:22:1.77:2,0,61	0/0:26,0:26:20.97:0,21,297	0/0:25,0:25:29.96:0,30,490	0/0:25,0:25:42.89:0,43,506	1/1:21,0:21:3.85:11,4,0	1/1:14,0:14:5.94:41,6,0	0/1:8,0:9:5.43:15,0,5	0/0:9,0:9:21.97:0,22,194	0/0:22,0:22:13.63:0,14,129	0/0:14,0:14:8.15:0,8,90	1/1:19,0:19:5.81:37,6,0	0/1:24,0:24:23.79:24,0,231	0/0:11,0:11:9.96:0,10,50	0/0:26,0:26:13.18:0,13,63	0/0:29,0:28:41.71:0,42,695	0/0:36,0:36:26.53:0,27,620	0/0:6,0:6:16.89:0,17,155
chr10_random	473231	.	A	ATG	68.89	PASS	AB=0.737;AC=3;AF=0.054;AN=56;BaseQRankSum=2.051;DP=538;FS=6.227;HRun=0;HaplotypeScore=172.0673;InbreedingCoeff=0.1178;MQ=46.35;MQ0=9;MQRankSum=-1.261;QD=2.15;ReadPosRankSum=3.490;VQSLOD=2.2020;culprit=QD;set=inputR	GT:AD:DP:GQ:PL	0/0:17,0:17:6.12:0,6,99	0/0:12,0:12:32.89:0,33,327	0/0:13,0:2:3.01:0,3,49	0/0:14,0:6:12.04:0,12,179	0/0:21,0:21:31.17:0,31,338	0/0:12,0:12:13.59:0,14,228	0/0:16,0:16:29.12:0,29,230	0/0:43,0:36:95.57:0,96,786	0/1:9,5:14:66.58:143,0,67	0/0:28,0:28:32.20:0,32,324	0/0:13,0:13:0.88:0,1,40	0/0:22,0:22:11.51:0,12,75	0/0:27,0:27:47.28:0,47,384	0/0:25,0:25:51.59:0,52,546	0/0:25,0:25:42.99:0,43,513	0/0:18,0:18:5.54:0,6,25	0/0:14,0:14:4.44:0,4,14	0/0:9,0:9:5.17:0,5,21	0/0:10,0:10:21.97:0,22,214	0/0:22,0:22:20.88:0,21,190	0/0:14,0:14:8.39:0,8,101	1/1:18,0:18:0.26:1,0,0	0/0:24,0:24:37.18:0,37,341	0/0:11,0:11:9.96:0,10,49	0/0:25,0:25:15.01:0,15,135	0/0:29,0:28:77.62:0,78,753	0/0:36,0:36:71.72:0,72,725	0/0:6,0:6:16.89:0,17,155
chr10_random	473401	.	A	AATA	903.81	PASS	AB=0.976;AC=26;AF=0.464;AN=56;BaseQRankSum=-3.935;DP=516;FS=11.031;HRun=0;HaplotypeScore=168.8069;InbreedingCoeff=-0.4082;MQ=72.48;MQ0=0;MQRankSum=-9.225;QD=1.96;ReadPosRankSum=1.853;VQSLOD=1.8348;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	0/1:14,0:14:25.82:31,0,26	1/1:4,0:4:5.12:34,5,0	0/0:14,0:14:30.06:0,30,475	0/0:7,0:7:21.07:0,21,342	0/1:25,0:25:62.60:63,0,142	0/1:19,0:19:14.57:37,0,15	0/1:12,0:12:0.82:1,0,109	0/1:38,0:37:99:100,0,517	0/1:9,0:9:24.03:24,0,34	0/1:28,0:28:36.86:37,0,132	0/1:22,0:22:37.83:38,0,74	0/1:20,0:20:38.32:38,0,59	0/1:20,0:20:54.71:74,0,55	0/1:14,0:14:29.87:30,0,132	0/1:22,0:22:18.38:34,0,18	0/1:20,0:20:45.74:46,0,88	0/1:16,0:16:0.42:15,0,0	0/0:8,0:8:8.09:0,8,31	0/0:16,0:16:33.70:0,34,268	0/1:2,35:39:99:216,0,111	0/0:10,0:10:7.84:0,8,97	0/1:20,0:20:1.88:2,0,228	0/1:25,0:25:23.86:24,0,221	1/1:13,0:13:2.20:39,2,0	0/1:18,0:18:78.36:78,0,82	0/1:22,0:22:9.76:10,0,201	0/1:26,0:26:39.78:51,0,40	1/1:15,0:15:9.58:39,10,0
chr10_random	473408	.	T	TAAG	25828.86	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.194;DP=515;FS=7.371;HRun=0;HaplotypeScore=80.8528;InbreedingCoeff=0.9714;MQ=77.42;MQ0=0;MQRankSum=-7.690;QD=52.71;ReadPosRankSum=4.753;VQSLOD=7.2999;culprit=HaplotypeScore;set=inputR	GT:AD:DP:GQ:PL	1/1:0,16:16:33.11:810,33,0	1/1:0,4:4:12.04:294,12,0	0/0:14,0:14:29.26:0,29,499	0/0:11,0:11:29.86:0,30,389	1/1:1,23:25:59.90:1247,60,0	1/1:0,20:22:48.16:1140,48,0	1/1:0,9:10:21.07:516,21,0	1/1:0,30:33:99:1871,99,0	1/1:0,8:8:24.08:589,24,0	1/1:1,28:29:87.06:1873,87,0	1/1:0,21:22:57.19:1243,57,0	1/1:0,20:20:42.14:976,42,0	1/1:0,18:18:36.12:880,36,0	1/1:0,10:11:27.09:662,27,0	1/1:0,24:27:45.15:1067,45,0	1/1:0,21:21:48.16:1140,48,0	1/1:0,16:16:45.07:1049,45,0	1/1:0,8:10:18.06:406,18,0	1/1:0,15:15:45.08:913,45,0	1/1:35,0:35:66.01:1311,66,0	1/1:0,9:10:18.06:443,18,0	1/1:0,16:16:41.95:880,42,0	1/1:1,22:24:54.44:1173,54,0	1/1:0,12:13:27.09:662,27,0	1/1:0,16:18:39.13:917,39,0	1/1:0,21:21:63.20:1425,63,0	1/1:0,28:30:63.22:1531,63,0	1/1:0,15:15:33.11:810,33,0
chr10_random	473757	.	A	AATAAC	268.33	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=11.603;DP=546;FS=136.162;HRun=0;HaplotypeScore=216.1622;InbreedingCoeff=-0.2946;MQ=60.65;MQ0=0;MQRankSum=-11.316;QD=0.82;ReadPosRankSum=11.892;VQSLOD=-0.5154;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	0/1:16,0:16:5.40:5,0,144	0/1:7,0:7:1.50:2,0,45	0/0:11,0:11:20.21:0,20,508	0/0:12,0:12:32.98:0,33,527	0/1:31,0:31:71.54:72,0,150	0/1:20,0:20:0.47:0,0,194	0/1:17,0:17:4.23:4,0,332	0/0:39,0:39:91.79:0,92,1095	0/1:17,0:17:12.65:13,0,211	0/0:23,0:23:53.18:0,53,488	0/1:17,0:17:19.76:20,0,330	0/1:24,0:24:33.15:33,0,249	0/1:28,0:28:62.40:62,0,228	0/1:26,0:26:61.74:62,0,118	0/1:23,0:23:50.12:50,0,64	0/1:28,0:28:36.56:37,0,275	0/0:12,0:12:2.01:0,2,86	0/0:11,0:11:2.81:0,3,37	0/0:18,0:18:33.09:0,33,273	0/0:2,26:36:23.30:0,23,294	0/0:2,0:2:0.32:0,0,30	0/1:18,0:18:2.15:2,0,307	0/1:17,0:17:24.06:24,0,244	0/1:9,0:9:4.98:15,0,5	0/0:23,0:23:9.02:0,9,305	0/0:32,0:32:56.83:0,57,549	0/1:18,0:16:0.26:0,0,209	1/1:11,0:11:1.78:4,2,0
chr10_random	473761	.	C	CATAAT	35107.54	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.975;DP=584;FS=2.938;HRun=0;HaplotypeScore=103.2023;InbreedingCoeff=0.8931;MQ=62.08;MQ0=0;MQRankSum=-8.068;QD=63.14;ReadPosRankSum=4.790;VQSLOD=5.5558;culprit=HaplotypeScore;set=inputR	GT:AD:DP:GQ:PL	1/1:2,13:15:33.03:933,33,0	1/1:0,7:7:18.06:561,18,0	0/0:16,0:16:39.96:0,40,649	0/0:12,0:12:27.08:0,27,490	1/1:2,29:34:81.19:2305,81,0	1/1:3,19:24:48.16:1496,48,0	1/1:6,13:21:27.09:838,27,0	1/1:13,28:43:99:3219,114,0	1/1:3,16:20:39.13:1216,39,0	1/1:6,19:26:66.21:1841,66,0	1/1:4,12:16:30.02:858,30,0	1/1:4,20:26:54.19:1676,54,0	1/1:3,25:29:66.23:2053,66,0	1/1:1,25:28:63.22:1957,63,0	1/1:1,25:28:66.23:2055,66,0	1/1:4,24:31:72.25:2240,72,0	1/1:1,12:15:24:613,24,0	1/1:2,9:11:28.65:846,29,0	1/1:2,16:21:60.16:1667,60,0	1/1:32,0:32:29.99:343,30,0	1/1:0,3:4:3.01:93,3,0	1/1:3,14:17:39.05:1137,39,0	1/1:3,13:18:30.10:930,30,0	1/1:1,9:10:18.06:557,18,0	1/1:3,18:23:48.16:1497,48,0	1/1:5,25:30:81.28:2492,81,0	1/1:3,15:16:42.14:1309,42,0	1/1:2,7:9:12.04:374,12,0
chr10_random	474069	.	T	TA	10157.77	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.485;DP=396;FS=0.000;HRun=8;HaplotypeScore=118.8459;InbreedingCoeff=0.7967;MQ=66.36;MQ0=1;MQRankSum=-6.270;QD=27.23;ReadPosRankSum=2.054;VQSLOD=3.6247;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	1/1:3,10:13:27.01:283,27,0	1/1:1,2:3:6.02:69,6,0	0/0:15,0:13:6.87:0,7,195	0/0:8,0:7:15.01:0,15,137	1/1:6,13:19:39.07:435,39,0	1/1:5,17:22:54.16:623,54,0	1/1:1,7:8:21.06:242,21,0	1/1:8,26:34:90.22:1015,90,0	1/1:6,17:23:57.11:630,57,0	1/1:4,14:18:45.09:497,45,0	1/1:2,11:13:30.09:346,30,0	1/1:2,12:14:36.11:413,36,0	1/1:2,15:17:51.13:568,51,0	1/1:1,14:15:45.09:504,45,0	1/1:2,10:12:33.07:367,33,0	1/1:5,18:23:57.17:656,57,0	1/1:4,5:9:15.03:164,15,0	1/1:1,9:9:21.06:242,21,0	1/1:4,7:11:27.07:304,27,0	1/1:9,2:11:9.03:104,9,0	1/1:0,3:3:6.02:66,6,0	1/1:0,6:6:18.05:207,18,0	1/1:3,10:13:27.07:303,27,0	1/1:4,9:13:30.08:336,30,0	1/1:1,6:7:18.05:208,18,0	1/1:5,18:23:60.13:670,60,0	1/1:8,20:28:41.74:733,42,0	1/1:0,5:5:15.04:173,15,0
chr10_random	474092	.	G	GAT	13598.12	PASS	AC=48;AF=0.923;AN=52;BaseQRankSum=-1.635;DP=415;FS=9.299;HRun=0;HaplotypeScore=96.8089;InbreedingCoeff=0.9145;MQ=70.26;MQ0=2;MQRankSum=-6.643;QD=35.41;ReadPosRankSum=3.720;VQSLOD=7.1183;culprit=HaplotypeScore;set=inputR	GT:AD:DP:GQ:PL	1/1:2,5:7:15.05:254,15,0	1/1:1,5:6:15.05:255,15,0	0/0:9,0:9:15.05:0,15,195	0/0:14,0:14:30.01:0,30,354	1/1:6,13:19:33.11:560,33,0	1/1:7,12:19:36.12:611,36,0	1/1:1,6:7:18.06:305,18,0	1/1:12,29:42:90.31:1522,90,0	1/1:5,17:22:51.17:847,51,0	1/1:5,12:17:36.12:611,36,0	1/1:5,12:18:33.11:560,33,0	1/1:3,13:15:36.12:606,36,0	1/1:5,12:18:33.11:560,33,0	1/1:4,11:15:30.10:507,30,0	1/1:4,10:14:33.11:556,33,0	1/1:6,14:20:45.14:739,45,0	1/1:3,5:8:18.06:301,18,0	./.	1/1:2,10:13:33.10:535,33,0	1/1:18,0:18:9.03:153,9,0	1/1:1,4:5:12.04:204,12,0	1/1:1,5:6:15.05:254,15,0	1/1:2,10:11:24.08:407,24,0	1/1:3,11:14:27.09:458,27,0	1/1:3,9:12:25.97:456,26,0	1/1:5,21:27:66.23:1115,66,0	1/1:5,24:29:72.25:1220,72,0	./.
chr10_random	474279	.	A	AC	11006.50	PASS	AB=0.516;AC=51;AF=0.911;AN=56;BaseQRankSum=-6.444;DP=336;FS=1.768;HRun=0;HaplotypeScore=51.6388;InbreedingCoeff=0.6841;MQ=79.52;MQ0=0;MQRankSum=-7.040;QD=36.21;ReadPosRankSum=2.382;VQSLOD=4.3894;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	1/1:0,7:7:18.06:270,18,0	1/1:0,5:5:12.04:187,12,0	0/0:15,0:13:39.11:0,39,517	0/0:17,0:16:42.01:0,42,537	1/1:0,21:21:48.16:735,48,0	1/1:2,10:12:2.86:302,3,0	1/1:0,7:7:21.07:317,21,0	1/1:1,22:23:66.16:978,66,0	1/1:0,14:14:35.99:527,36,0	1/1:0,23:23:69.23:1070,69,0	1/1:0,11:11:33.11:511,33,0	1/1:0,7:7:15.05:233,15,0	1/1:0,9:9:24:343,24,0	1/1:0,12:12:23.95:341,24,0	1/1:0,12:12:30.10:455,30,0	1/1:0,11:11:24.08:373,24,0	1/1:0,5:5:12.04:186,12,0	1/1:0,4:4:6.02:93,6,0	1/1:0,15:15:39.10:574,39,0	0/1:1,0:16:2.04:85,0,2	1/1:0,6:6:18.06:281,18,0	1/1:0,4:4:9.03:140,9,0	1/1:0,10:10:26.95:342,27,0	1/1:0,8:8:9.03:140,9,0	1/1:0,15:15:45.15:699,45,0	1/1:1,23:24:69.01:991,69,0	1/1:0,16:16:33.11:503,33,0	1/1:0,7:7:21.07:327,21,0
chr10_random	478588	.	GA	G	287.01	PASS	AB=0.780;AC=4;AF=0.071;AN=56;BaseQRankSum=4.577;DP=492;FS=1.431;HRun=13;HaplotypeScore=60.5717;InbreedingCoeff=0.3796;MQ=57.18;MQ0=11;MQRankSum=1.605;QD=5.52;ReadPosRankSum=1.716;VQSLOD=2.0901;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	0/0:29,0:30:60.04:0,60,561	0/0:6,0:6:18.02:0,18,170	0/0:17,0:5:8.04:0,8,60	0/0:25,0:8:6.19:0,6,54	0/0:22,0:24:50.96:0,51,469	0/0:15,1:15:17.11:0,17,314	0/0:14,1:15:15.02:0,15,146	0/0:21,0:22:33.50:0,33,308	0/0:11,0:11:24.03:0,24,229	0/1:17,2:20:4.97:5,0,255	0/0:22,1:25:37.71:0,38,467	0/0:16,0:16:35.97:0,36,334	0/0:12,1:14:13.31:0,13,307	0/0:17,1:18:14.12:0,14,282	0/0:18,0:20:14.54:0,15,313	0/0:11,0:14:13.97:0,14,145	0/1:6,7:12:8.30:110,0,8	1/1:3,16:19:15.58:277,16,0	0/0:19,0:19:48.03:0,48,454	0/0:13,0:13:14.90:0,15,118	0/0:12,2:14:5.61:0,6,212	0/0:16,1:17:8.13:0,8,225	0/0:18,1:19:17.98:0,18,314	0/0:19,0:19:39.02:0,39,366	0/0:21,0:21:36.91:0,37,342	0/0:14,0:17:47.84:0,48,435	0/0:18,1:20:28.88:0,29,401	0/0:6,0:7:4.84:0,5,63
chr10_random	478600	.	AA	A	286.95	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=4.659;DP=532;FS=1.432;HRun=11;HaplotypeScore=60.0677;InbreedingCoeff=0.3872;MQ=64.10;MQ0=4;MQRankSum=0.426;QD=4.78;ReadPosRankSum=2.570;VQSLOD=0.8789;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	0/0:31,0:31:60.04:0,60,561	0/0:6,0:6:18.02:0,18,170	0/0:20,0:7:8.03:0,8,60	0/0:24,0:14:8.56:0,9,63	0/0:28,0:28:50.96:0,51,469	0/0:18,0:18:17.11:0,17,314	0/0:11,0:11:15.02:0,15,146	0/0:33,0:32:33.50:0,33,307	0/0:12,0:12:24.03:0,24,229	0/1:19,0:19:4.97:5,0,255	0/0:32,0:32:37.71:0,38,467	0/0:17,0:17:36.44:0,36,334	0/0:18,0:18:13.31:0,13,307	0/0:14,0:14:14.12:0,14,282	0/0:17,0:17:14.54:0,15,313	0/0:11,0:11:13.97:0,14,145	0/1:19,0:18:8.31:110,0,8	1/1:22,0:22:15.55:277,16,0	0/0:20,0:20:48.03:0,48,454	0/0:5,9:14:14.90:0,15,118	0/0:11,0:11:5.61:0,6,212	0/0:19,0:19:8.13:0,8,225	0/0:21,0:21:17.98:0,18,314	0/0:19,0:19:39.02:0,39,366	0/0:23,0:23:36.91:0,37,342	0/0:28,0:28:47.84:0,48,435	0/0:20,0:20:28.88:0,29,401	0/0:5,0:5:4.84:0,5,63
chr10_random	478713	.	GTTT	G	6675.87	PASS	AB=0.817;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.918;DP=483;FS=6.634;HRun=16;HaplotypeScore=80.6427;InbreedingCoeff=0.2772;MQ=64.88;MQ0=1;MQRankSum=-1.589;QD=14.17;ReadPosRankSum=3.197;VQSLOD=3.1575;culprit=HaplotypeScore;set=inputR	GT:AD:DP:GQ:PL	1/1:10,9:21:17.53:178,18,0	1/1:3,7:10:21.01:224,21,0	0/0:12,0:7:8.81:0,9,58	0/1:8,0:6:0.54:1,0,9	1/1:9,11:21:28.28:319,28,0	1/1:8,15:25:14.25:389,14,0	1/1:5,10:17:10.02:285,10,0	1/1:12,18:32:0.12:399,0,0	1/1:8,11:19:2.20:227,2,0	1/1:9,9:18:20.62:206,21,0	1/1:6,11:18:26.56:275,27,0	1/1:5,5:13:13.10:144,13,0	1/1:7,4:11:17.89:187,18,0	1/1:6,9:16:16.30:189,16,0	1/1:7,4:12:14.53:131,15,0	1/1:9,9:19:35.67:354,36,0	1/1:3,16:20:38.85:405,39,0	1/1:8,11:20:38.74:380,39,0	0/1:12,5:17:23.79:181,0,24	0/1:11,10:21:9.87:254,0,10	1/1:2,5:8:7.41:94,7,0	1/1:5,9:16:13.44:172,13,0	1/1:11,13:26:10.23:295,10,0	1/1:4,8:13:19.41:223,19,0	1/1:9,15:28:23.15:457,23,0	1/1:7,17:24:19.71:423,20,0	1/1:7,8:16:5.93:252,6,0	1/1:0,1:1:3.01:32,3,0
chr10_random	478714	.	TTTT	T	6637.52	PASS	AB=0.931;AC=49;AF=0.875;AN=56;BaseQRankSum=-2.428;DP=484;FS=4.422;HRun=15;HaplotypeScore=80.8427;InbreedingCoeff=0.1751;MQ=64.91;MQ0=1;MQRankSum=-3.492;QD=14.06;ReadPosRankSum=3.806;VQSLOD=3.3217;culprit=HaplotypeScore;set=inputR	GT:AD:DP:GQ:PL	1/1:21,0:21:17.53:178,18,0	1/1:10,0:10:21.01:224,21,0	0/0:12,0:7:8.81:0,9,58	0/1:9,0:6:0.54:1,0,9	1/1:22,0:22:24.48:313,24,0	1/1:25,0:25:14.25:389,14,0	1/1:17,0:17:10.02:285,10,0	1/1:31,0:31:0.12:399,0,0	1/1:19,0:19:2.20:227,2,0	1/1:18,0:18:20.62:206,21,0	1/1:18,0:18:26.56:275,27,0	1/1:13,0:13:13.10:144,13,0	1/1:10,0:10:17.89:187,18,0	0/1:17,0:17:4.53:170,0,5	1/1:12,0:12:14.53:131,15,0	1/1:19,0:19:35.67:354,36,0	1/1:20,0:20:38.85:405,39,0	1/1:20,0:20:38.74:380,39,0	0/1:17,0:17:23.79:181,0,24	0/1:10,11:21:9.87:254,0,10	1/1:8,0:8:7.41:94,7,0	1/1:16,0:16:13.44:172,13,0	0/1:27,0:27:11.12:282,0,11	1/1:13,0:13:19.41:223,19,0	1/1:28,0:28:23.15:457,23,0	1/1:24,0:24:19.71:423,20,0	1/1:16,0:16:5.93:252,6,0	1/1:1,0:1:3.01:32,3,0
chr10_random	480001	.	A	AA	11841.64	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.167;DP=618;FS=0.000;HRun=1;HaplotypeScore=96.8104;InbreedingCoeff=0.9469;MQ=81.51;MQ0=0;MQRankSum=-9.485;QD=20.35;ReadPosRankSum=5.767;VQSLOD=4.9124;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	1/1:35,0:35:83.78:667,84,0	1/1:9,0:9:23.96:202,24,0	0/0:15,0:15:37.88:0,38,384	0/0:21,0:21:56.88:0,57,611	1/1:37,0:37:89.82:770,90,0	1/1:16,0:16:47.88:388,48,0	1/1:18,0:18:50.80:393,51,0	1/1:20,0:20:47.52:336,48,0	1/1:17,0:17:38.88:308,39,0	1/1:27,0:26:71.33:519,71,0	1/1:20,0:20:50.95:450,51,0	1/1:18,0:18:50.83:399,51,0	1/1:22,0:22:47.88:388,48,0	1/1:24,0:24:68.83:553,69,0	1/1:23,0:23:59.84:477,60,0	1/1:23,0:23:65.78:517,66,0	1/1:26,0:26:74.83:608,75,0	1/1:20,0:20:41.88:339,42,0	1/1:23,0:23:62.49:447,62,0	1/1:0,34:34:30.05:296,30,0	1/1:15,0:15:44.89:359,45,0	1/1:30,0:30:80.92:719,81,0	1/1:26,0:26:74.84:628,75,0	1/1:16,0:16:38.90:312,39,0	1/1:19,0:18:44.88:381,45,0	1/1:30,0:30:83.33:618,83,0	1/1:32,0:32:86.84:719,87,0	1/1:2,0:2:6:51,6,0
chr10_random	480002	.	A	AC	23845.38	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.632;DP=618;FS=0.000;HRun=0;HaplotypeScore=52.3342;InbreedingCoeff=0.9474;MQ=80.44;MQ0=0;MQRankSum=-9.497;QD=40.90;ReadPosRankSum=5.113;VQSLOD=4.9521;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	1/1:1,33:34:84.29:1341,84,0	1/1:0,9:9:24.08:382,24,0	0/0:15,0:15:39.07:0,39,485	0/0:20,0:20:56.89:0,57,686	1/1:1,37:38:99:1498,105,0	1/1:0,16:16:48.16:766,48,0	1/1:1,19:20:51.17:814,51,0	1/1:1,20:21:54.11:812,54,0	1/1:0,17:17:39.13:622,39,0	1/1:2,28:29:78.23:1198,78,0	1/1:0,20:20:54.08:826,54,0	1/1:0,17:17:51.17:814,51,0	1/1:0,21:21:48.16:765,48,0	1/1:0,24:24:69.24:1101,69,0	1/1:0,21:21:63.13:974,63,0	1/1:0,23:23:66.23:1053,66,0	1/1:0,26:26:75.26:1196,75,0	1/1:0,20:20:42.14:670,42,0	1/1:0,23:23:69.18:1051,69,0	1/1:33,0:33:41.90:549,42,0	1/1:0,16:16:45.15:718,45,0	1/1:0,28:28:81.28:1287,81,0	1/1:0,26:26:75.26:1184,75,0	1/1:1,16:17:42.04:638,42,0	1/1:0,19:18:45.15:706,45,0	1/1:0,30:30:90.28:1382,90,0	1/1:0,32:32:90.22:1404,90,0	1/1:0,2:2:6.02:96,6,0
chr10_random	485524	.	G	GT	17985.94	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-9.137;DP=692;FS=4.009;HRun=4;HaplotypeScore=71.6165;InbreedingCoeff=0.9705;MQ=72.66;MQ0=3;MQRankSum=-4.316;QD=31.17;ReadPosRankSum=3.081;VQSLOD=5.4607;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	1/1:3,25:28:54.14:717,54,0	1/1:0,6:6:18.06:246,18,0	0/0:38,0:33:61.92:0,62,792	0/0:39,0:34:7.20:0,7,428	1/1:0,25:25:66.22:895,66,0	1/1:3,30:33:69.23:936,69,0	1/1:3,11:14:21.07:287,21,0	1/1:1,36:37:99:1458,108,0	1/1:2,15:17:42.14:574,42,0	1/1:0,29:29:81.23:1066,81,0	1/1:6,30:37:81.16:1025,81,0	1/1:0,17:17:45.15:615,45,0	1/1:5,26:31:60.20:820,60,0	1/1:1,22:23:51.17:697,51,0	1/1:1,23:25:51.03:693,51,0	1/1:1,14:15:30.10:410,30,0	0/0:18,0:18:54.15:0,54,612	0/0:20,0:20:54.14:0,54,602	1/1:1,17:18:51.13:641,51,0	1/1:5,24:29:81.27:1094,81,0	1/1:0,17:17:36.12:492,36,0	1/1:1,28:29:69.23:929,69,0	1/1:0,18:19:41.82:561,42,0	1/1:1,15:16:18.06:246,18,0	1/1:2,26:28:60.20:819,60,0	1/1:3,37:40:99:1436,111,0	1/1:2,24:26:60.18:796,60,0	1/1:0,18:18:39.13:533,39,0
chr10_random	485525	.	T	TT	17985.94	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-9.137;DP=696;FS=4.009;HRun=3;HaplotypeScore=72.9452;InbreedingCoeff=0.9705;MQ=72.00;MQ0=3;MQRankSum=-4.872;QD=31.12;ReadPosRankSum=3.036;VQSLOD=5.0805;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	1/1:28,0:28:54.14:717,54,0	1/1:6,0:6:18.06:246,18,0	0/0:39,0:34:61.92:0,62,792	0/0:40,0:35:7.20:0,7,428	1/1:26,0:26:66.22:895,66,0	1/1:33,0:33:69.23:936,69,0	1/1:15,0:15:21.07:287,21,0	1/1:37,0:37:99:1458,108,0	1/1:17,0:17:42.14:574,42,0	1/1:29,0:29:81.23:1066,81,0	1/1:36,0:36:81.16:1025,81,0	1/1:17,0:17:45.15:615,45,0	1/1:32,0:32:60.20:820,60,0	1/1:23,0:23:51.17:697,51,0	1/1:25,0:25:51.03:693,51,0	1/1:15,0:15:30.10:410,30,0	0/0:19,0:19:54.15:0,54,612	0/0:20,0:20:54.14:0,54,602	1/1:18,0:18:51.13:641,51,0	1/1:25,5:30:81.27:1094,81,0	1/1:17,0:17:36.12:492,36,0	1/1:29,0:29:69.23:929,69,0	1/1:19,0:19:41.82:561,42,0	1/1:17,0:17:18.06:246,18,0	1/1:26,0:26:60.20:819,60,0	1/1:39,0:39:99:1436,111,0	1/1:26,0:26:60.18:796,60,0	1/1:18,0:18:39.13:533,39,0
chr10_random	486514	.	T	TCCCTTAGGA	48498.62	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-8.524;DP=677;FS=0.481;HRun=0;HaplotypeScore=154.6918;InbreedingCoeff=0.9756;MQ=74.67;MQ0=0;MQRankSum=-11.476;QD=81.79;ReadPosRankSum=0.940;VQSLOD=5.0358;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	1/1:13,10:24:34:1543,34,0	1/1:1,5:6:15.05:704,15,0	0/0:25,0:25:45.15:0,45,1139	0/0:17,0:17:41.88:0,42,900	1/1:11,12:27:36.12:1629,36,0	1/1:8,29:38:93.32:4227,93,0	1/1:14,14:28:54.21:2425,54,0	1/1:24,13:40:69.24:2564,69,0	1/1:11,15:27:45.15:2110,45,0	1/1:11,13:27:60.19:2385,60,0	1/1:6,11:19:33.11:1285,33,0	1/1:6,13:20:39.13:1828,39,0	1/1:11,20:33:69.24:3111,69,0	1/1:7,17:26:60.21:2704,60,0	1/1:12,16:29:60.21:2666,60,0	1/1:9,15:25:45.15:2110,45,0	0/0:27,0:27:75.26:0,75,2114	0/0:15,0:15:42.06:0,42,1135	1/1:21,11:32:63.22:2566,63,0	1/1:9,0:24:24.08:884,24,0	1/1:7,8:19:21.07:742,21,0	1/1:7,15:23:45.15:1880,45,0	1/1:12,12:26:45.15:2015,45,0	1/1:8,6:15:18.06:717,18,0	1/1:11,18:30:63.21:2746,63,0	1/1:9,15:26:63.19:2840,63,0	1/1:12,11:26:54.15:2393,54,0	1/1:1,2:3:9.03:422,9,0
chr10_random	487331	.	T	TA	9602.50	PASS	AB=0.750;AC=47;AF=0.839;AN=56;BaseQRankSum=-7.458;DP=560;FS=3.202;HRun=11;HaplotypeScore=55.4199;InbreedingCoeff=0.7581;MQ=66.65;MQ0=0;MQRankSum=2.004;QD=18.98;ReadPosRankSum=0.796;VQSLOD=5.9656;culprit=HaplotypeScore;set=inputR	GT:AD:DP:GQ:PL	1/1:2,16:18:36.07:365,36,0	1/1:1,10:12:26.75:258,27,0	0/0:7,0:8:13.98:0,14,98	0/0:6,0:5:8.96:0,9,70	1/1:18,27:46:71.38:855,71,0	1/1:2,23:26:45.89:642,46,0	0/1:5,3:9:35.35:48,0,35	1/1:10,20:31:42.47:542,42,0	1/1:2,16:19:44.92:441,45,0	1/1:14,30:45:9.05:778,9,0	1/1:6,20:27:33.63:486,34,0	1/1:4,9:13:6.83:250,7,0	1/1:2,27:29:48.91:677,49,0	1/1:0,6:6:15.03:152,15,0	1/1:8,18:26:24.86:434,25,0	1/1:3,13:17:12.17:295,12,0	0/0:15,0:16:37.02:0,37,280	0/0:23,1:24:23.32:0,23,362	1/1:7,13:20:15.82:330,16,0	1/1:2,0:35:36.02:567,36,0	1/1:0,6:6:15.03:152,15,0	1/1:4,9:13:27.05:274,27,0	1/1:4,13:17:30.52:300,31,0	1/1:2,10:13:26.89:258,27,0	1/1:3,17:21:38.14:420,38,0	1/1:6,11:18:35.90:343,36,0	1/1:8,28:36:49.85:704,50,0	1/1:0,2:2:3.01:30,3,0
chr10_random	488129	.	G	GT	25677.70	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-2.084;DP=768;FS=5.584;HRun=1;HaplotypeScore=175.8667;InbreedingCoeff=0.9988;MQ=74.09;MQ0=1;MQRankSum=-2.954;QD=38.67;ReadPosRankSum=3.741;VQSLOD=4.1134;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	1/1:5,37:42:99:1599,109,0	1/1:1,8:9:21.07:314,21,0	0/0:24,0:24:68.86:0,69,834	0/0:16,0:16:42.10:0,42,543	1/1:0,21:21:63.17:917,63,0	1/1:4,32:35:89.67:1312,90,0	1/1:3,23:24:63.21:943,63,0	1/1:2,33:35:99:1477,99,0	1/1:7,19:25:56.88:871,57,0	1/1:2,23:25:74.84:1073,75,0	1/1:0,21:21:63.15:917,63,0	1/1:7,30:36:92.43:1331,92,0	1/1:3,41:42:99:1752,117,0	1/1:4,20:23:60.96:900,61,0	1/1:6,24:29:60.40:1022,60,0	1/1:4,33:36:93.87:1371,94,0	0/0:29,0:29:62.46:0,62,1052	0/0:35,0:34:88.92:0,89,1068	1/1:3,23:25:70.78:1007,71,0	1/1:2,22:24:72.20:1048,72,0	1/1:4,42:44:99:1754,100,0	1/1:1,22:23:60.20:899,60,0	1/1:2,14:16:45.15:660,45,0	1/1:8,22:28:60.82:962,61,0	1/1:1,21:22:63.21:944,63,0	1/1:3,29:29:84.28:1257,84,0	1/1:0,20:19:57.19:853,57,0	1/1:0,11:11:33.11:494,33,0
chr10_random	488329	.	C	CTTT	2717.82	PASS	AB=0.979;AC=29;AF=0.518;AN=56;BaseQRankSum=10.655;DP=504;FS=7.555;HRun=3;HaplotypeScore=103.0181;InbreedingCoeff=-0.2797;MQ=55.27;MQ0=0;MQRankSum=-10.974;QD=6.93;ReadPosRankSum=4.452;VQSLOD=-0.3960;culprit=HaplotypeScore;set=inputR	GT:AD:DP:GQ:PL	1/1:26,0:26:13.28:181,13,0	1/1:9,0:9:12.50:135,12,0	0/0:23,0:19:38.30:0,38,487	0/0:15,0:9:21.06:0,21,310	0/1:14,0:14:24.13:174,0,24	1/1:21,0:21:21.76:266,22,0	1/1:17,0:17:5.06:152,5,0	0/1:33,0:31:52.26:52,0,86	1/1:15,0:15:11.92:101,12,0	0/1:15,1:16:70.77:130,0,71	0/1:14,0:14:55.11:55,0,78	0/1:20,0:20:47.84:159,0,48	0/1:17,0:17:34.80:121,0,35	0/1:19,0:19:41.88:139,0,42	0/1:11,1:12:61.63:62,0,88	0/1:21,0:21:66.76:192,0,67	0/0:32,1:33:21.98:0,22,411	0/0:28,0:27:53.65:0,54,407	0/1:16,1:17:99:116,0,112	0/0:13,0:13:5.90:0,6,37	0/1:16,0:15:13.92:59,0,14	0/1:13,0:13:49.80:122,0,50	0/1:14,0:14:60.79:70,0,61	0/1:21,1:22:32.36:251,0,32	0/1:16,0:16:31.92:102,0,32	0/1:21,0:21:49.79:122,0,50	0/1:12,1:14:33.88:106,0,34	1/1:5,0:5:3:25,3,0
chr10_random	488334	.	T	TTTCTTC	1473.46	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=10.471;DP=491;FS=5.372;HRun=0;HaplotypeScore=121.9699;InbreedingCoeff=-0.3108;MQ=54.53;MQ0=2;MQRankSum=-11.546;QD=4.25;ReadPosRankSum=5.316;VQSLOD=1.4365;culprit=QD;set=inputR	GT:AD:DP:GQ:PL	0/1:26,0:26:42.67:83,0,43	1/1:10,0:10:12.09:70,12,0	0/0:20,0:16:41.93:0,42,708	0/0:12,0:6:18.06:0,18,406	0/1:16,0:16:99:109,0,161	0/1:21,0:21:62.51:117,0,63	1/1:20,0:20:15.20:97,15,0	0/0:28,0:25:25.74:0,26,628	0/1:13,0:13:29.02:35,0,29	0/1:18,0:18:55.72:56,0,286	0/1:14,0:14:21.25:21,0,204	0/1:19,0:19:37.81:120,0,38	0/1:13,0:13:22.10:77,0,22	0/1:17,0:17:6.24:97,0,6	0/1:14,0:14:51.46:51,0,97	0/1:17,0:17:35.42:143,0,35	0/0:34,0:34:40.06:0,40,721	0/0:27,0:26:44.57:0,45,552	0/1:15,0:15:17.22:17,0,230	0/0:2,1:19:18.02:0,18,194	0/1:16,0:15:21.99:22,0,45	0/1:13,0:13:82.86:83,0,102	0/1:12,0:12:60.01:60,0,95	0/1:18,0:18:7.93:164,0,8	0/1:17,0:17:55.89:59,0,56	0/1:22,0:21:30.50:30,0,235	1/1:16,0:16:13.02:131,13,0	0/0:4,0:4:1.55:0,2,4
chr10_random	488336	.	C	CTTCTTT	12482.90	PASS	AB=0.522;AC=47;AF=0.839;AN=56;BaseQRankSum=-6.565;DP=578;FS=39.298;HRun=0;HaplotypeScore=94.9367;InbreedingCoeff=0.8072;MQ=52.86;MQ0=2;MQRankSum=-7.038;QD=25.58;ReadPosRankSum=-2.741;VQSLOD=2.3161;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	1/1:3,28:37:26.80:753,27,0	1/1:0,9:12:12.51:409,13,0	0/0:18,0:14:29.90:0,30,372	0/0:12,0:6:17.69:0,18,203	1/1:2,13:23:41.76:696,42,0	1/1:4,18:28:24.08:774,24,0	0/1:2,19:24:0.47:490,0,0	1/1:2,19:24:63.74:797,64,0	1/1:1,10:17:12:337,12,0	1/1:1,3:21:45.28:698,45,0	1/1:2,8:15:20.84:297,21,0	1/1:2,17:27:18.06:563,18,0	1/1:1,10:17:12.04:401,12,0	1/1:1,17:21:19.26:527,19,0	1/1:6,0:13:18.04:376,18,0	1/1:1,14:19:21.04:667,21,0	0/0:5,0:35:21.54:0,22,219	0/0:2,0:24:42.35:0,42,246	1/1:1,10:16:43.11:797,43,0	1/1:16,0:16:14.59:106,15,0	1/1:3,12:17:8.97:222,9,0	1/1:2,12:20:25.15:502,25,0	1/1:2,10:15:7.49:280,7,0	1/1:1,16:23:27.09:871,27,0	1/1:4,17:29:12.04:406,12,0	1/1:4,15:27:62.39:1051,62,0	1/1:4,0:17:14.46:418,14,0	1/1:1,0:5:3.01:46,3,0
chr10_random	490491	.	C	CT	7143.64	PASS	AB=0.714;AC=43;AF=0.768;AN=56;BaseQRankSum=-8.239;DP=624;FS=0.463;HRun=12;HaplotypeScore=74.6032;InbreedingCoeff=0.0578;MQ=76.15;MQ0=0;MQRankSum=0.264;QD=12.11;ReadPosRankSum=0.021;VQSLOD=4.6426;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	0/1:9,15:24:38.59:264,0,39	0/1:4,3:7:12.90:49,0,13	0/1:18,1:20:18.85:19,0,21	0/1:12,0:11:2.20:9,0,2	0/1:10,13:24:14.75:257,0,15	1/1:3,10:14:23.87:219,24,0	0/1:11,14:26:58.42:169,0,58	0/1:19,15:35:11.65:266,0,12	1/1:10,15:25:8.14:241,8,0	1/1:10,15:25:23.11:367,23,0	1/1:5,13:19:33.68:288,34,0	1/1:9,20:29:8.75:396,9,0	1/1:5,23:28:24.36:515,24,0	1/1:7,20:28:4.09:350,4,0	1/1:7,22:29:34.68:477,35,0	1/1:8,10:18:5.14:211,5,0	0/0:5,0:25:36.64:0,37,106	0/0:1,0:9:16.29:0,16,47	1/1:5,16:22:4.31:353,4,0	1/1:2,0:38:34.78:524,35,0	0/1:6,9:15:21.07:104,0,21	1/1:9,16:25:4.63:173,5,0	1/1:4,11:17:29.72:262,30,0	0/1:5,18:23:1.46:384,0,1	1/1:8,17:26:17.74:364,18,0	1/1:7,20:27:16.23:466,16,0	1/1:9,18:27:1.23:329,1,0	1/1:1,4:5:9.01:88,9,0
chr10_random	492749	.	GTG	G	321.36	PASS	AB=1.000;AC=31;AF=0.705;AN=44;BaseQRankSum=2.804;DP=465;FS=53.484;HRun=0;HaplotypeScore=94.1910;InbreedingCoeff=0.1651;MQ=42.73;MQ0=63;MQRankSum=1.117;QD=0.91;ReadPosRankSum=1.623;VQSLOD=-0.6485;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	0/1:23,0:20:11.33:49,0,11	1/1:3,0:3:2.74:12,3,0	./.	./.	0/1:15,0:14:0:0,0,0	1/1:14,0:12:4.92:37,5,0	0/0:29,0:23:1.77:0,2,4	0/0:16,0:12:5.85:0,6,25	./.	1/1:23,0:20:0.12:9,0,0	1/1:13,0:12:2.50:14,2,0	1/1:19,0:17:11.98:67,12,0	1/1:32,0:30:0.91:11,1,0	0/1:20,0:19:0:0,0,0	0/1:26,0:24:0:0,0,0	1/1:13,0:9:9.16:66,9,0	0/1:23,0:16:4.86:5,0,28	./.	1/1:7,0:5:2.90:16,3,0	./.	1/1:26,0:19:2.55:12,3,0	0/1:14,0:11:0:0,0,0	0/1:19,0:18:0:0,0,0	./.	1/1:15,0:14:11.86:85,12,0	0/1:25,0:21:4.84:5,0,19	0/1:18,0:18:3.97:19,0,4	1/1:6,0:4:2.35:19,2,0
chr10_random	493223	.	GGAAA	G	454.79	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=6.071;DP=470;FS=5.211;HRun=0;HaplotypeScore=87.4140;InbreedingCoeff=0.5954;MQ=75.15;MQ0=8;MQRankSum=-3.193;QD=9.28;ReadPosRankSum=3.838;VQSLOD=1.5369;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	0/0:26,0:26:24.85:0,25,275	0/1:4,0:4:3.15:3,0,15	0/0:58,0:22:36.75:0,37,364	0/0:44,0:20:20.52:0,21,179	0/0:16,1:17:34.35:0,34,291	0/0:14,0:14:7.96:0,8,161	0/0:20,0:20:44.05:0,44,322	0/0:21,1:22:51.89:0,52,389	0/0:9,0:9:22.80:0,23,162	0/0:13,0:13:30.70:0,31,292	0/0:11,0:11:31.20:0,31,268	0/0:14,0:14:41.85:0,42,342	0/0:14,0:14:6.77:0,7,167	0/0:12,0:12:29.05:0,29,230	0/1:13,0:13:10.69:11,0,44	0/0:8,0:8:12.56:0,13,82	1/1:12,4:15:32.36:335,32,0	1/1:1,15:16:14.84:233,15,0	0/0:13,0:13:5.65:0,6,177	0/0:12,0:12:29.62:0,30,177	0/0:10,0:10:20.73:0,21,157	0/0:11,0:11:26.99:0,27,204	0/0:14,0:14:28:0,28,234	0/0:18,0:17:22.09:0,22,140	0/0:18,0:18:34.24:0,34,325	0/0:17,0:17:33.89:0,34,343	0/0:16,0:16:40.22:0,40,283	0/0:10,0:10:23.31:0,23,169
chr10_random	493477	.	T	TTGGGG	199.18	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.640;DP=531;FS=0.000;HRun=0;HaplotypeScore=110.2775;InbreedingCoeff=0.8177;MQ=76.40;MQ0=0;MQRankSum=-0.518;QD=6.04;ReadPosRankSum=-1.581;VQSLOD=1.6652;culprit=QD;set=inputR	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,2346	0/0:4,0:4:12.04:0,12,275	0/0:13,0:13:26.29:0,26,455	0/0:26,0:25:34.78:0,35,509	0/0:15,0:15:42.10:0,42,831	0/0:15,0:15:45.11:0,45,895	0/0:25,0:25:69.10:0,69,1232	0/0:34,0:35:90.14:0,90,1724	0/0:17,0:17:45.09:0,45,977	0/0:18,0:18:48.13:0,48,1026	0/0:18,0:18:53.84:0,54,1135	0/0:16,0:16:45.14:0,45,966	0/0:14,0:14:39.09:0,39,831	0/0:17,0:17:42.04:0,42,907	0/0:29,0:29:87.17:0,87,1801	0/0:17,0:17:51.11:0,51,1073	1/1:0,13:24:6.46:198,6,0	1/1:0,1:8:3.01:99,3,0	0/0:15,0:15:42.12:0,42,914	0/0:21,0:21:54.19:0,54,1225	0/0:22,0:22:66.17:0,66,1307	0/0:16,0:16:45.11:0,45,959	0/0:16,0:16:36.05:0,36,866	0/0:21,0:21:57.20:0,57,1254	0/0:17,0:17:48.15:0,48,1057	0/0:18,0:18:51.16:0,51,1078	0/0:29,0:28:87.26:0,87,1902	0/0:6,0:6:15.03:0,15,344
chr10_random	493770	.	GA	G	1324.88	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.573;DP=684;FS=0.602;HRun=2;HaplotypeScore=69.6933;InbreedingCoeff=0.9956;MQ=57.98;MQ0=2;MQRankSum=0.368;QD=30.11;ReadPosRankSum=2.584;VQSLOD=3.3363;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,172,2533	0/0:6,0:6:18.06:0,18,270	0/0:39,0:25:60.83:0,61,874	0/0:37,1:27:64.27:0,64,923	0/0:19,0:19:54.18:0,54,809	0/0:20,0:20:60.20:0,60,898	0/0:26,0:26:78.24:0,78,1129	0/0:33,0:33:90.29:0,90,1314	0/0:27,0:27:78.26:0,78,1169	0/0:21,0:21:63.20:0,63,913	0/0:18,0:18:48.16:0,48,719	0/0:19,0:19:57.18:0,57,835	0/0:29,0:29:87.29:0,87,1303	0/0:27,0:27:81.27:0,81,1209	0/0:21,0:21:60.17:0,60,841	0/0:12,0:12:36.12:0,36,540	1/1:0,24:24:66.21:855,66,0	1/1:0,19:19:47.52:592,48,0	0/0:16,0:15:45.13:0,45,637	0/0:16,0:16:42.61:0,43,630	0/0:49,0:49:99:0,141,2113	0/0:15,0:15:42.14:0,42,624	0/0:12,0:12:33.11:0,33,495	0/0:32,0:32:96.28:0,96,1414	0/0:31,0:31:87.29:0,87,1303	0/0:23,0:23:66.22:0,66,971	0/0:22,0:22:66.22:0,66,980	0/0:12,0:12:36.01:0,36,467
chr10_random	494030	.	TAA	T	12107.57	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=3.501;DP=533;FS=2.184;HRun=10;HaplotypeScore=75.8919;InbreedingCoeff=0.9650;MQ=71.50;MQ0=1;MQRankSum=-2.245;QD=27.27;ReadPosRankSum=2.667;VQSLOD=5.1689;culprit=HaplotypeScore;set=inputR	GT:AD:DP:GQ:PL	1/1:1,32:33:81.22:903,81,0	1/1:1,10:11:21.05:234,21,0	0/0:25,0:19:40.20:0,40,633	0/0:14,0:11:15.66:0,16,279	1/1:0,26:26:78.11:839,78,0	1/1:1,17:18:48.12:535,48,0	1/1:1,15:16:45.12:502,45,0	1/1:6,28:33:81.16:889,81,0	1/1:6,11:17:33.08:367,33,0	1/1:4,27:31:78.19:868,78,0	1/1:1,17:18:45.12:502,45,0	1/1:1,17:18:39.09:435,39,0	1/1:0,13:13:33.09:368,33,0	1/1:2,15:17:36.09:401,36,0	1/1:2,17:19:48.13:535,48,0	1/1:0,13:13:36.10:401,36,0	0/0:31,0:31:90.31:0,90,1425	0/0:17,0:19:54.17:0,54,813	1/1:4,13:17:39.08:424,39,0	1/1:0,18:18:51.13:565,51,0	1/1:2,5:7:15.04:167,15,0	1/1:2,7:9:21.05:233,21,0	1/1:4,14:18:39.10:435,39,0	1/1:0,5:5:9.02:100,9,0	1/1:2,26:28:69.18:769,69,0	1/1:2,27:29:81.12:866,81,0	1/1:1,24:25:57.15:635,57,0	1/1:0,4:4:12.03:134,12,0
chr10_random	495604	.	AAG	A	12221.16	PASS	AB=0.981;AC=53;AF=0.946;AN=56;BaseQRankSum=-4.482;DP=663;FS=25.913;HRun=0;HaplotypeScore=110.2141;InbreedingCoeff=0.6393;MQ=74.76;MQ0=10;MQRankSum=-1.722;QD=20.27;ReadPosRankSum=6.738;VQSLOD=2.8718;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	1/1:7,20:33:68.20:692,68,0	1/1:2,5:7:15.04:177,15,0	0/1:51,1:31:14.83:15,0,336	0/0:59,0:39:16.35:0,16,541	1/1:4,14:18:38.97:415,39,0	1/1:4,20:25:48.11:557,48,0	1/1:4,19:23:49.10:604,49,0	1/1:7,11:18:32.93:371,33,0	1/1:2,12:16:32.76:350,33,0	1/1:8,13:22:41.93:457,42,0	1/1:8,22:29:56.45:620,56,0	1/1:6,11:16:27.08:314,27,0	1/1:1,12:13:29.89:357,30,0	1/1:3,14:18:44.97:514,45,0	1/1:8,17:26:47.98:550,48,0	1/1:3,13:18:38.61:400,39,0	1/1:6,16:25:50.65:542,51,0	1/1:6,7:14:18.05:215,18,0	1/1:9,11:20:33.09:383,33,0	1/1:31,0:31:39.11:455,39,0	1/1:4,16:19:45.14:536,45,0	1/1:2,11:14:35.94:407,36,0	1/1:5,20:25:50.99:586,51,0	1/1:7,13:20:32.94:393,33,0	1/1:9,22:32:63.02:729,63,0	1/1:6,18:24:54.14:623,54,0	1/1:5,22:27:39.49:636,39,0	1/1:2,9:11:27.08:322,27,0
chr10_random	496589	.	GGGT	G	496.40	PASS	AB=0.950;AC=28;AF=0.560;AN=50;BaseQRankSum=-0.535;DP=141;FS=45.427;HRun=0;HaplotypeScore=32.9638;InbreedingCoeff=0.1420;MQ=123.01;MQ0=0;MQRankSum=-3.098;QD=6.13;ReadPosRankSum=-2.515;VQSLOD=-0.2190;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	0/1:7,0:7:36.09:36,0,61	1/1:2,0:2:1.25:3,1,0	0/0:33,0:29:81.15:0,81,1449	0/0:17,0:18:33.26:0,33,697	1/1:1,0:1:2.97:20,3,0	0/0:1,0:1:3:0,3,26	1/1:10,0:9:10.31:76,10,0	0/1:3,6:9:3.48:163,0,3	0/0:3,0:3:2.98:0,3,22	1/1:4,0:4:1.16:35,1,0	./.	0/0:1,0:1:2.68:0,3,11	0/1:3,0:3:18.82:19,0,21	0/1:3,0:3:0.83:11,0,1	0/0:3,0:3:5.54:0,6,47	0/0:1,0:1:2.92:0,3,17	1/1:10,0:10:8.88:28,9,0	1/1:5,0:5:4.44:14,4,0	1/1:2,0:2:5.38:58,5,0	0/1:2,0:2:13.90:15,0,14	1/1:5,0:5:10.61:85,11,0	1/1:4,0:4:2.90:16,3,0	0/1:2,0:2:1.27:1,0,22	0/1:5,0:5:14.36:21,0,14	1/1:3,0:3:0.74:5,1,0	./.	0/1:4,0:4:9.40:34,0,9	./.
chr10_random	496590	.	GGT	G	718.93	PASS	AB=1.000;AC=29;AF=0.580;AN=50;BaseQRankSum=-1.500;DP=137;FS=39.864;HRun=0;HaplotypeScore=29.2878;InbreedingCoeff=0.2652;MQ=118.84;MQ0=0;MQRankSum=-3.413;QD=9.22;ReadPosRankSum=-2.714;VQSLOD=0.7154;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	0/1:6,0:6:35.30:39,0,35	0/0:2,0:2:1.25:0,1,3	0/0:30,0:26:59.50:0,60,1063	0/0:17,0:18:28.35:0,28,574	1/1:1,0:1:2.97:20,3,0	0/0:1,0:1:3:0,3,25	1/1:10,0:9:2.99:68,3,0	1/1:8,0:8:12.08:152,12,0	0/0:3,0:3:2.37:0,2,8	1/1:0,0:3:1.14:16,1,0	./.	0/0:1,0:1:2.60:0,3,10	0/1:3,0:3:18.83:19,0,19	0/1:3,0:3:8.49:8,0,18	0/0:3,0:3:5.21:0,5,30	0/0:1,0:1:0.47:0,0,1	1/1:1,9:10:12.04:179,12,0	1/1:0,5:5:6.02:90,6,0	1/1:2,0:2:4.55:29,5,0	1/1:2,0:2:2.97:21,3,0	1/1:6,0:6:14.01:111,14,0	1/1:5,0:5:2.90:16,3,0	0/1:2,0:2:1.50:1,0,19	0/1:4,0:4:4.67:26,0,5	1/1:4,0:4:5.12:28,5,0	./.	1/1:4,0:4:4.10:40,4,0	./.
chr10_random	496773	.	TTA	T	13989.37	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.470;DP=434;FS=26.153;HRun=0;HaplotypeScore=102.5017;InbreedingCoeff=0.9560;MQ=68.89;MQ0=0;MQRankSum=-7.811;QD=35.42;ReadPosRankSum=5.371;VQSLOD=4.1310;culprit=HaplotypeScore;set=inputR	GT:AD:DP:GQ:PL	1/1:1,25:26:46.67:975,47,0	1/1:0,7:7:15.05:233,15,0	0/0:20,0:17:33.43:0,33,390	0/0:19,0:18:28.92:0,29,373	1/1:0,13:13:30.10:462,30,0	1/1:0,10:10:24.08:373,24,0	1/1:1,20:20:43.61:640,44,0	1/1:0,30:29:87.11:1161,87,0	1/1:0,19:19:36.12:565,36,0	1/1:0,18:18:54.12:765,54,0	1/1:0,13:13:30.10:462,30,0	1/1:0,14:14:33.06:489,33,0	1/1:0,22:22:57.14:860,57,0	1/1:0,16:16:39.13:603,39,0	1/1:0,12:14:35.90:513,36,0	1/1:0,8:8:11.74:186,12,0	1/1:0,0:10:18.02:171,18,0	1/1:0,0:12:27.04:257,27,0	1/1:0,19:19:57.14:861,57,0	1/1:5,13:18:42.11:630,42,0	1/1:0,14:14:36.02:544,36,0	1/1:0,11:11:21.03:299,21,0	1/1:0,10:10:24.03:345,24,0	1/1:1,19:20:46.40:719,46,0	1/1:0,13:13:21.07:329,21,0	1/1:0,16:16:48.04:705,48,0	1/1:0,13:13:39.13:605,39,0	1/1:0,8:8:15.05:238,15,0
chr10_random	496774	.	TAA	T	7236.99	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.875;DP=441;FS=21.322;HRun=11;HaplotypeScore=126.8501;InbreedingCoeff=0.9413;MQ=68.65;MQ0=0;MQRankSum=-5.132;QD=18.32;ReadPosRankSum=5.439;VQSLOD=2.0010;culprit=HaplotypeScore;set=inputR	GT:AD:DP:GQ:PL	1/1:26,0:26:33.93:479,34,0	1/1:7,0:7:15.02:137,15,0	0/0:24,0:18:32.22:0,32,369	0/0:21,0:19:19.65:0,20,256	1/1:13,0:13:30.03:283,30,0	1/1:10,0:10:23.99:215,24,0	1/1:21,0:20:14.61:279,15,0	1/1:30,0:29:59.72:482,60,0	1/1:19,0:19:35.93:307,36,0	1/1:18,0:18:38.95:307,39,0	1/1:13,0:13:30.03:283,30,0	1/1:14,0:14:30.40:256,30,0	1/1:22,0:22:54.43:479,54,0	1/1:16,0:16:39.02:359,39,0	1/1:14,0:14:35.89:305,36,0	1/1:8,0:8:11.71:111,12,0	1/1:10,0:10:17.70:113,18,0	1/1:12,0:12:26.56:169,27,0	1/1:19,0:19:50.49:388,50,0	1/1:13,5:18:39.02:354,39,0	1/1:14,0:14:31.49:246,31,0	1/1:11,0:11:18.02:166,18,0	1/1:10,0:10:21.50:194,21,0	1/1:20,0:20:30.86:336,31,0	1/1:13,0:13:20.97:181,21,0	1/1:16,0:16:41.78:330,42,0	1/1:13,0:13:39.02:356,39,0	1/1:8,0:8:14.99:125,15,0
chr10_random	498947	.	A	AAAAT	3421.02	PASS	AB=0.972;AC=31;AF=0.554;AN=56;BaseQRankSum=14.489;DP=626;FS=38.039;HRun=0;HaplotypeScore=191.2474;InbreedingCoeff=-0.2150;MQ=84.69;MQ0=0;MQRankSum=-5.919;QD=6.37;ReadPosRankSum=9.136;VQSLOD=1.0705;culprit=QD;set=inputR	GT:AD:DP:GQ:PL	0/1:33,0:33:13.46:159,0,13	0/1:13,0:13:0.23:31,0,0	0/0:25,0:25:69.19:0,69,1294	0/0:19,0:19:20.48:0,20,840	1/1:40,0:40:77.64:361,78,0	1/1:18,0:18:33.25:174,33,0	1/1:21,0:21:32.37:192,32,0	0/1:28,0:28:99:308,0,138	1/1:23,0:23:28.79:161,29,0	0/1:26,0:26:54.69:169,0,55	0/1:23,0:23:37.81:149,0,38	0/1:19,0:19:50.58:75,0,51	0/1:29,0:29:99:137,0,100	1/1:19,0:19:1.44:73,1,0	0/1:17,0:17:15.56:56,0,16	0/1:27,0:27:55.14:162,0,55	0/0:32,0:32:93.32:0,93,1798	0/0:13,0:13:36.12:0,36,680	0/1:13,0:13:42.97:44,0,43	0/1:2,17:20:26.49:223,0,26	0/1:14,0:14:17.20:17,0,32	0/1:17,0:17:74.37:74,0,115	1/1:27,0:27:26.65:134,27,0	0/1:18,0:18:9.50:55,0,9	0/1:33,0:33:45.99:132,0,46	0/1:18,0:18:45.36:105,0,45	1/1:34,0:34:12.50:410,12,0	0/1:7,0:7:19.14:19,0,46
chr10_random	498950	.	T	TAAAA	36258.68	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-11.233;DP=656;FS=4.703;HRun=3;HaplotypeScore=86.9403;InbreedingCoeff=0.9949;MQ=83.12;MQ0=0;MQRankSum=-7.392;QD=63.72;ReadPosRankSum=4.250;VQSLOD=4.5587;culprit=HaplotypeScore;set=inputR	GT:AD:DP:GQ:PL	1/1:2,31:36:78.13:2026,78,0	1/1:0,11:11:24.08:613,24,0	0/0:25,0:25:72.17:0,72,1237	0/0:18,0:18:38.66:0,39,759	1/1:0,39:39:99:2905,108,0	1/1:1,16:17:48.16:1314,48,0	1/1:0,23:24:57.20:1560,57,0	1/1:8,22:30:78.26:1997,78,0	1/1:1,22:23:69.24:1830,69,0	1/1:2,24:28:78.71:1888,79,0	1/1:1,22:24:69.19:1659,69,0	1/1:3,17:20:48.16:1189,48,0	1/1:4,28:32:72.25:1808,72,0	1/1:0,17:17:51.18:1397,51,0	1/1:0,17:17:45.15:1081,45,0	1/1:2,27:29:66.23:1684,66,0	0/0:31,0:31:93.28:0,93,1639	0/0:13,0:13:39.09:0,39,676	1/1:0,15:18:54.05:1235,54,0	1/1:20,0:20:51.05:1062,51,0	1/1:0,14:14:33.03:737,33,0	1/1:6,12:20:42.10:911,42,0	1/1:0,26:29:74.75:1991,75,0	1/1:0,18:20:39.08:1005,39,0	1/1:1,32:34:87.13:2271,87,0	1/1:1,18:19:54.16:1391,54,0	1/1:1,35:41:86.84:2295,87,0	1/1:2,5:7:15.05:411,15,0
chr10_random	499049	.	AT	A	11929.59	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=5.334;DP=575;FS=2.662;HRun=9;HaplotypeScore=60.4940;InbreedingCoeff=0.9667;MQ=69.69;MQ0=0;MQRankSum=-2.286;QD=23.25;ReadPosRankSum=0.042;VQSLOD=5.6753;culprit=HaplotypeScore;set=inputR	GT:AD:DP:GQ:PL	1/1:2,31:33:78.02:714,78,0	1/1:0,11:11:33.02:302,33,0	0/0:16,0:13:17.49:0,17,238	0/0:5,0:5:6.02:0,6,69	1/1:4,26:30:75.03:686,75,0	1/1:1,30:31:83.88:769,84,0	1/1:4,18:22:54.02:494,54,0	1/1:6,23:29:66:598,66,0	1/1:3,21:24:60.02:549,60,0	1/1:2,26:28:78.04:714,78,0	1/1:3,19:22:54.02:494,54,0	1/1:2,13:15:39.02:357,39,0	1/1:1,16:17:45.02:412,45,0	1/1:0,15:15:42.02:384,42,0	1/1:0,17:17:51.03:467,51,0	1/1:0,21:21:51.03:467,51,0	0/0:31,0:31:87.24:0,87,991	0/0:10,0:10:24.07:0,24,277	1/1:5,11:16:35.99:323,36,0	1/1:0,20:20:51.02:466,51,0	1/1:2,22:24:63.03:577,63,0	1/1:4,12:16:39.02:357,39,0	1/1:3,15:18:36.01:330,36,0	1/1:0,21:21:57.03:522,57,0	1/1:0,16:16:39.02:357,39,0	1/1:2,18:20:54.03:494,54,0	1/1:5,27:32:77.94:714,78,0	1/1:1,14:15:42.02:384,42,0
chr10_random	499770	.	C	CT	589.65	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-0.982;DP=418;FS=6.565;HRun=10;HaplotypeScore=53.1504;InbreedingCoeff=0.7309;MQ=70.63;MQ0=5;MQRankSum=-1.293;QD=15.52;ReadPosRankSum=1.143;VQSLOD=3.6711;culprit=HaplotypeScore;set=inputR	GT:AD:DP:GQ:PL	0/0:33,0:33:74.80:0,75,608	0/0:4,0:4:11.97:0,12,95	0/0:17,0:15:32.82:0,33,258	0/1:8,0:6:9.11:9,0,66	0/0:15,0:16:46.95:0,47,369	0/0:10,0:10:29.97:0,30,246	0/0:13,0:13:32.96:0,33,271	0/0:24,0:22:47.86:0,48,385	0/0:19,0:19:35.94:0,36,296	0/0:16,0:16:35.93:0,36,296	0/0:14,0:14:32.86:0,33,258	0/0:18,0:18:35.91:0,36,296	0/0:13,0:13:32.91:0,33,266	0/0:14,0:14:32.95:0,33,269	0/0:15,0:15:29.92:0,30,243	0/0:10,0:11:29.01:0,29,228	1/1:2,15:17:17.46:391,17,0	1/1:2,10:13:26.12:314,26,0	0/0:19,0:19:29.94:0,30,244	0/0:8,0:8:17.92:0,18,142	0/0:16,0:17:31.97:0,32,252	0/0:11,0:11:29.96:0,30,246	0/0:15,0:15:35.95:0,36,295	0/0:14,1:15:6.94:0,7,260	0/0:10,0:11:29:0,29,227	0/0:23,0:22:59.90:0,60,490	0/0:17,0:17:38.94:0,39,320	0/0:7,0:5:8.99:0,9,74
chr10_random	500467	.	C	CT	22433	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=6.337;DP=722;FS=1.850;HRun=3;HaplotypeScore=147.7761;InbreedingCoeff=0.9529;MQ=62.07;MQ0=0;MQRankSum=1.102;QD=36.66;ReadPosRankSum=4.052;VQSLOD=3.7033;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	1/1:2,37:39:99:1386,99,0	1/1:0,10:10:30.10:420,30,0	0/0:31,0:27:69.18:0,69,796	0/0:22,0:18:49.01:0,49,549	1/1:0,16:16:48.16:672,48,0	1/1:3,27:30:78.26:1092,78,0	1/1:4,18:22:57.19:792,57,0	1/1:5,28:32:84.24:1120,84,0	1/1:1,34:35:99:1383,99,0	1/1:2,32:34:96.32:1344,96,0	1/1:0,15:15:45.15:630,45,0	1/1:2,30:33:90.30:1248,90,0	1/1:2,24:26:69.23:963,69,0	1/1:0,26:26:75.25:1050,75,0	1/1:0,21:21:60.20:840,60,0	1/1:2,17:19:51.17:714,51,0	0/0:34,0:34:96.29:0,96,1149	0/0:23,0:23:63.17:0,63,741	1/1:5,23:28:63.18:841,63,0	1/1:37,0:37:84.13:1088,84,0	1/1:1,21:22:51.17:714,51,0	1/1:4,21:25:66.19:909,66,0	1/1:0,29:29:81.27:1130,81,0	1/1:1,24:25:69.23:966,69,0	1/1:1,23:24:60.20:840,60,0	1/1:2,25:27:72.24:1009,72,0	1/1:2,33:35:90.29:1240,90,0	1/1:0,1:1:3.01:42,3,0
chr10_random	501556	.	GT	G	176.93	PASS	AB=0.719;AC=1;AF=0.018;AN=56;BaseQRankSum=3.493;DP=737;FS=1.225;HRun=4;HaplotypeScore=121.9387;InbreedingCoeff=-0.0194;MQ=75.90;MQ0=2;MQRankSum=-2.302;QD=7.69;ReadPosRankSum=-0.986;VQSLOD=0.0413;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	0/0:29,0:29:36.08:0,36,481	0/0:14,0:14:18.95:0,19,249	0/0:37,0:33:73.98:0,74,1030	0/0:31,0:27:62.14:0,62,787	0/0:31,0:31:45.15:0,45,629	0/0:29,0:29:39.13:0,39,538	0/0:27,0:27:39.13:0,39,545	0/0:49,0:49:99:0,141,1925	0/0:37,0:37:51.47:0,51,677	0/0:33,0:33:93.27:0,93,1272	0/0:20,0:20:54.14:0,54,731	0/0:23,0:23:17.98:0,18,208	0/0:19,0:19:27.07:0,27,376	0/0:31,0:31:48.15:0,48,654	0/0:31,0:31:41.91:0,42,565	0/0:31,0:31:66.19:0,66,902	0/0:27,0:27:72.18:0,72,965	0/0:16,0:16:45.15:0,45,625	0/0:18,0:18:51.17:0,51,714	0/1:14,9:23:99:251,0,513	0/0:26,0:26:72.23:0,72,990	0/0:22,0:22:45.15:0,45,616	0/0:23,0:23:39.12:0,39,532	0/0:25,0:25:72.20:0,72,985	0/0:25,0:25:27:0,27,333	0/0:22,0:22:63.21:0,63,878	0/0:28,0:28:78.24:0,78,1057	0/0:10,0:10:15.05:0,15,210
chr10_random	501591	.	GTTGTGT	G	6983.35	PASS	AB=0.673;AC=47;AF=0.839;AN=56;BaseQRankSum=0.883;DP=696;FS=9.012;HRun=0;HaplotypeScore=158.9616;InbreedingCoeff=0.5084;MQ=58.17;MQ0=13;MQRankSum=-4.449;QD=12.45;ReadPosRankSum=0.505;VQSLOD=3.4841;culprit=QD;set=inputR	GT:AD:DP:GQ:PL	1/1:1,25:29:11.81:108,12,0	0/1:0,8:8:0:0,0,0	0/0:57,0:23:32.28:0,32,443	0/0:62,0:26:52.87:0,53,576	1/1:0,30:31:6.01:129,6,0	1/1:2,21:25:10.59:160,11,0	1/1:0,21:22:5.93:40,6,0	1/1:2,38:40:99:1008,112,0	1/1:0,26:29:14.54:258,15,0	1/1:22,4:27:73.35:1012,73,0	1/1:11,3:16:8.95:68,9,0	1/1:0,20:21:5.84:95,6,0	1/1:0,16:19:11.43:177,11,0	1/1:1,28:30:3.08:146,3,0	1/1:1,25:30:10.16:151,10,0	1/1:1,17:20:18.06:401,18,0	1/1:15,0:18:34.76:311,35,0	0/1:14,0:13:17.62:194,0,18	1/1:22,0:21:62.30:727,62,0	1/1:14,2:17:26.90:259,27,0	1/1:25,0:27:38.47:303,38,0	0/0:0,16:16:0:0,0,0	0/1:1,12:12:0:0,0,0	1/1:19,5:25:33.28:366,33,0	1/1:0,22:22:3.01:75,3,0	1/1:20,0:20:28.95:513,29,0	1/1:22,0:22:50.72:408,51,0	1/1:1,8:9:3.01:75,3,0
chr10_random	501793	.	T	TTGTGTCTGTG	3761.32	PASS	AC=48;AF=0.960;AN=50;BaseQRankSum=1.703;DP=452;FS=12.389;HRun=0;HaplotypeScore=373.6744;InbreedingCoeff=0.2275;MQ=31.93;MQ0=1;MQRankSum=-1.233;QD=9.33;ReadPosRankSum=0.264;VQSLOD=0.6719;culprit=QD;set=inputR	GT:AD:DP:GQ:PL	1/1:9,0:9:4.83:59,5,0	1/1:4,0:4:3.01:91,3,0	0/0:4,0:1:3.01:0,3,38	./.	1/1:17,0:17:0.47:1,0,0	./.	1/1:13,0:13:7.84:141,8,0	1/1:27,0:27:36.55:628,37,0	1/1:15,0:15:8.46:103,8,0	1/1:32,0:32:28.93:365,29,0	1/1:17,0:17:3.01:47,3,0	1/1:23,0:23:16.21:52,16,0	1/1:20,0:20:22.85:327,23,0	1/1:24,0:24:19.10:89,19,0	1/1:18,0:18:13.79:42,14,0	1/1:22,0:22:10.68:113,11,0	1/1:11,0:11:9.50:276,10,0	1/1:9,0:9:6.02:192,6,0	1/1:12,0:11:10.81:93,11,0	./.	1/1:11,0:10:6.02:97,6,0	1/1:25,0:25:3.01:47,3,0	1/1:13,0:13:5.69:82,6,0	1/1:10,0:10:2.98:22,3,0	1/1:12,0:12:3.01:90,3,0	1/1:30,0:30:33.14:535,33,0	1/1:25,0:25:17.75:185,18,0	1/1:4,0:4:3.01:84,3,0
chr10_random	503919	.	TGCATTC	T	608.10	PASS	AB=0.988;AC=18;AF=0.333;AN=54;BaseQRankSum=1.407;DP=648;FS=48.100;HRun=0;HaplotypeScore=197.7331;InbreedingCoeff=-0.1234;MQ=54.07;MQ0=9;MQRankSum=-3.145;QD=1.98;ReadPosRankSum=-0.676;VQSLOD=1.0072;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	0/0:31,0:31:3.48:0,3,38	1/1:8,0:8:3:36,3,0	0/0:41,0:16:45.15:0,45,1434	0/0:47,0:23:62.93:0,63,1579	0/0:17,0:17:2.94:0,3,65	1/1:22,0:21:1.82:69,2,0	0/0:27,0:26:6.23:0,6,191	0/0:31,0:31:16.55:0,17,226	0/1:26,1:27:21.59:22,0,112	0/1:20,0:20:5.65:6,0,135	0/1:7,0:7:0:0,0,0	0/1:30,1:31:19.16:19,0,111	0/1:17,0:16:24.06:45,0,24	0/1:24,1:25:20.03:20,0,119	0/1:22,0:22:15.45:15,0,139	0/1:24,0:24:99:100,0,203	0/0:33,0:33:76:0,76,2593	0/1:27,0:27:28.37:28,0,1577	0/0:19,0:19:4.37:0,4,103	0/0:15,0:15:2.14:0,2,140	0/0:37,0:36:2.92:0,3,17	./.	0/1:10,0:10:4.26:36,0,4	0/1:25,0:25:3.32:3,0,216	0/0:14,1:15:5.64:0,6,52	0/1:21,1:22:90.31:312,0,90	1/1:20,0:20:2.50:39,3,0	0/0:12,0:12:6.91:0,7,47
chr10_random	503922	.	ATTCG	A	5850.83	PASS	AB=0.917;AC=41;AF=0.759;AN=54;BaseQRankSum=6.388;DP=643;FS=0.977;HRun=0;HaplotypeScore=162.1773;InbreedingCoeff=0.4465;MQ=51.80;MQ0=9;MQRankSum=-3.533;QD=12.19;ReadPosRankSum=1.944;VQSLOD=4.5796;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	1/1:30,0:30:5.38:44,5,0	1/1:8,0:8:1.42:100,1,0	0/0:40,0:15:32.92:0,33,728	0/0:43,0:19:35.17:0,35,684	1/1:18,0:18:4.11:11,4,0	1/1:23,0:22:13.40:146,13,0	1/1:24,0:23:4.45:426,4,0	1/1:28,0:28:75.22:958,75,0	1/1:25,1:26:14.54:93,15,0	1/1:22,0:22:45.62:650,46,0	0/1:2,5:7:0:0,0,0	1/1:31,1:32:14.94:81,15,0	1/1:16,1:17:16.95:199,17,0	0/1:26,0:26:40.83:324,0,41	0/1:21,0:21:45.07:315,0,45	1/1:20,1:23:17.22:397,17,0	0/0:35,0:34:93.66:0,94,1345	0/0:29,0:29:51.83:0,52,788	1/1:19,0:19:48.15:655,48,0	1/1:14,0:14:4.72:40,5,0	1/1:39,0:38:2.97:20,3,0	./.	1/1:10,0:10:7.51:87,8,0	0/1:26,0:26:22.86:401,0,23	0/1:14,0:14:0:0,0,0	1/1:3,18:21:51.13:682,51,0	1/1:0,19:20:6.01:101,6,0	1/1:0,11:11:6.02:119,6,0
chr10_random	503923	.	TTC	T	7247.10	PASS	AB=0.681;AC=44;AF=0.815;AN=54;BaseQRankSum=7.695;DP=629;FS=17.879;HRun=0;HaplotypeScore=142.0628;InbreedingCoeff=0.7232;MQ=51.61;MQ0=10;MQRankSum=-3.411;QD=15.45;ReadPosRankSum=1.269;VQSLOD=3.9541;culprit=HaplotypeScore;set=inputR	GT:AD:DP:GQ:PL	1/1:1,29:30:6.02:82,6,0	1/1:5,4:9:7.62:128,8,0	0/0:40,0:15:32.92:0,33,727	0/0:41,0:17:35.17:0,35,684	1/1:0,17:17:6.49:99,6,0	1/1:0,23:22:15.05:204,15,0	1/1:12,12:24:45.18:606,45,0	1/1:0,25:25:75.22:958,75,0	1/1:2,24:26:21.06:321,21,0	1/1:1,18:19:46.04:652,46,0	0/1:5,2:7:0:0,0,0	1/1:3,28:31:21.05:301,21,0	1/1:3,15:17:17.92:219,18,0	1/1:17,10:27:32.64:462,33,0	1/1:17,4:22:36.18:404,36,0	1/1:14,8:22:47.08:582,47,0	0/0:34,0:33:79.60:0,80,1237	0/0:29,0:29:5.72:0,6,612	1/1:0,17:17:48.16:661,48,0	1/1:9,5:14:5.91:84,6,0	1/1:0,38:37:2.97:20,3,0	./.	1/1:6,3:9:11.54:138,12,0	1/1:21,5:26:46.83:575,47,0	0/1:4,10:13:0:0,0,0	1/1:20,0:20:51.03:640,51,0	1/1:20,0:20:6.01:55,6,0	1/1:11,0:11:6.01:55,6,0
chr10_random	503924	.	TCG	T	3185.34	PASS	AB=0.992;AC=39;AF=0.722;AN=54;BaseQRankSum=8.578;DP=637;FS=1.004;HRun=0;HaplotypeScore=155.7564;InbreedingCoeff=0.2033;MQ=51.24;MQ0=11;MQRankSum=-4.259;QD=6.36;ReadPosRankSum=2.179;VQSLOD=3.5185;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	1/1:30,0:30:5.92:39,6,0	0/1:9,0:9:11.67:44,0,12	0/0:40,0:15:31.13:0,31,355	0/0:39,0:16:37.38:0,37,366	1/1:17,0:17:6.47:53,6,0	1/1:23,0:22:14.83:110,15,0	1/1:23,0:22:5.73:242,6,0	1/1:26,0:26:70.98:468,71,0	1/1:26,0:26:20.85:166,21,0	1/1:19,0:19:47.47:326,47,0	0/1:7,0:7:0:0,0,0	1/1:33,0:32:20.86:169,21,0	1/1:18,0:17:17.49:116,17,0	0/1:27,0:27:39.20:157,0,39	0/1:23,0:24:50.01:131,0,50	1/1:22,0:22:21.40:239,21,0	0/1:34,0:33:8.41:8,0,446	0/1:31,0:32:95.26:95,0,220	1/1:17,0:17:47:320,47,0	1/1:5,9:14:5.92:46,6,0	./.	0/0:17,0:17:2.99:0,3,23	0/1:9,0:9:5.64:57,0,6	0/1:26,0:26:22.50:204,0,23	0/1:14,0:13:0:0,0,0	1/1:20,0:20:46.18:293,46,0	1/1:20,0:20:5.74:30,6,0	1/1:11,0:11:5.75:30,6,0
chr10_random	503925	.	CGT	C	418.61	PASS	AB=1.000;AC=18;AF=0.360;AN=50;BaseQRankSum=2.540;DP=674;FS=32.183;HRun=0;HaplotypeScore=172.3906;InbreedingCoeff=0.1380;MQ=50.27;MQ0=12;MQRankSum=-1.291;QD=1.40;ReadPosRankSum=5.134;VQSLOD=0.8920;culprit=QD;set=inputR	GT:AD:DP:GQ:PL	0/0:32,0:32:4.24:0,4,26	0/0:11,0:11:9.01:0,9,109	./.	./.	0/0:20,0:20:4.58:0,5,47	0/1:25,0:24:9.05:9,0,39	0/0:24,0:23:5.46:0,5,106	0/0:33,0:33:17.65:0,18,118	0/1:28,0:28:7.20:7,0,18	0/0:20,0:20:5.94:0,6,41	0/1:8,0:8:0:0,0,0	0/1:36,0:35:3.66:4,0,77	0/1:20,0:19:12.03:12,0,17	0/0:27,0:27:16.97:0,17,215	0/0:26,0:26:26.82:0,27,305	0/1:24,0:24:10.02:10,0,78	1/1:26,7:32:6.86:247,7,0	1/1:20,13:33:18.82:194,19,0	./.	1/1:14,0:14:2.39:9,2,0	0/0:42,0:40:3:0,3,25	0/0:17,0:17:3.01:0,3,41	0/1:11,0:11:0.98:1,0,37	0/0:27,0:27:3.22:0,3,169	0/1:14,0:13:0:0,0,0	0/1:20,0:20:4.45:25,0,4	0/1:22,0:22:16.36:16,0,17	1/1:11,0:11:5.36:22,5,0
chr10_random	504263	.	A	ATTCAAACAATTAAGACCCA	33873.49	PASS	AB=0.750;AC=53;AF=0.981;AN=54;BaseQRankSum=0.027;DP=262;FS=10.113;HRun=0;HaplotypeScore=284.4640;InbreedingCoeff=-0.0481;MQ=55.66;MQ0=0;MQRankSum=-1.625;QD=129.78;ReadPosRankSum=1.448;VQSLOD=3.2838;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	1/1:16,0:16:42.10:2722,42,0	1/1:5,0:5:12.04:728,12,0	1/1:0,0:3:9.03:361,9,0	0/1:4,1:6:21.09:914,0,21	1/1:8,0:8:6.02:340,6,0	1/1:10,0:10:19.31:1040,19,0	1/1:8,0:8:18.06:532,18,0	1/1:14,0:14:42.14:2749,42,0	1/1:24,0:24:51.17:3342,51,0	1/1:7,0:7:18.06:988,18,0	1/1:3,0:3:3.01:250,3,0	1/1:14,0:14:30.46:1615,30,0	1/1:17,0:17:39.13:2335,39,0	1/1:9,0:9:15.05:799,15,0	1/1:12,0:12:18.06:1202,18,0	1/1:15,0:15:36.12:2196,36,0	1/1:10,0:10:24.08:1611,24,0	1/1:3,0:3:5.89:191,6,0	1/1:7,0:7:21.07:1286,21,0	1/1:7,0:7:6.01:273,6,0	1/1:7,0:7:21.03:952,21,0	1/1:6,0:6:12.04:706,12,0	1/1:11,0:11:22.86:907,23,0	1/1:3,0:3:6.01:184,6,0	1/1:10,0:10:30.10:2410,30,0	1/1:12,0:12:24.08:1774,24,0	1/1:14,0:14:30.07:1469,30,0	./.
chr10_random	506498	.	C	CAT	193.70	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.490;DP=345;FS=1.536;HRun=0;HaplotypeScore=56.7910;InbreedingCoeff=0.6790;MQ=57.68;MQ0=0;MQRankSum=-1.685;QD=19.37;ReadPosRankSum=-0.613;VQSLOD=3.3909;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	0/0:12,0:12:30.10:0,30,377	0/0:10,0:10:27.08:0,27,333	0/0:5,0:4:0.71:0,1,4	0/0:4,0:3:2.50:0,2,9	0/0:19,0:19:39.12:0,39,491	0/0:21,0:21:45.14:0,45,567	0/0:5,0:5:15.05:0,15,189	0/0:26,0:26:45.13:0,45,555	0/0:10,0:10:21.07:0,21,262	0/0:18,0:18:39.12:0,39,481	0/0:17,0:17:45.14:0,45,566	0/0:14,0:14:39.11:0,39,478	0/0:8,0:8:18.06:0,18,227	0/0:11,0:11:27.09:0,27,337	0/0:7,0:7:18.06:0,18,227	0/0:10,0:10:18.06:0,18,227	1/1:3,2:4:9.03:149,9,0	1/1:0,5:5:9.03:149,9,0	0/0:11,0:11:27.09:0,27,341	0/0:22,0:22:57.17:0,57,706	0/0:2,0:2:6.02:0,6,75	0/0:6,0:6:12.04:0,12,151	0/0:11,0:11:30.10:0,30,378	0/0:2,0:2:3.01:0,3,38	0/0:22,0:22:54.17:0,54,677	0/0:27,0:27:72.05:0,72,873	0/0:26,0:25:63.20:0,63,793	0/0:9,0:9:27.09:0,27,341
chr10_random	506515	.	A	AAT	143.02	PASS	AB=1.000;AC=5;AF=0.096;AN=52;BaseQRankSum=2.956;DP=321;FS=0.000;HRun=0;HaplotypeScore=61.9574;InbreedingCoeff=0.7292;MQ=59.27;MQ0=0;MQRankSum=-3.847;QD=10.22;ReadPosRankSum=-1.081;VQSLOD=2.8918;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	0/0:11,0:11:27.03:0,27,305	0/0:7,0:8:23.91:0,24,278	0/0:7,0:6:6.02:0,6,68	0/1:4,0:3:0:0,0,0	0/0:19,0:19:41.51:0,42,472	0/0:15,0:15:39.12:0,39,487	0/0:4,0:4:3:0,3,25	0/0:23,0:23:45.09:0,45,517	0/0:9,0:9:14.96:0,15,151	0/0:17,0:17:43.69:0,44,527	0/0:19,0:19:47.96:0,48,504	0/0:11,0:11:26.98:0,27,287	0/0:7,0:7:15.01:0,15,171	0/0:13,0:13:26.87:0,27,250	0/0:10,0:10:24.24:0,24,298	0/0:8,0:8:21:0,21,230	1/1:3,3:5:9.03:148,9,0	1/1:2,2:4:6.02:96,6,0	0/0:12,0:12:33.07:0,33,398	0/0:16,0:16:36.05:0,36,419	./.	0/0:6,0:6:14.88:0,15,117	0/0:16,0:16:32.47:0,32,413	./.	0/0:19,0:19:48.07:0,48,567	0/0:22,0:22:51.14:0,51,625	0/0:21,0:20:51.09:0,51,603	0/0:11,0:11:24.01:0,24,267
chr10_random	507660	.	AGTGTGT	A	1448.67	PASS	AB=0.839;AC=35;AF=0.729;AN=48;BaseQRankSum=2.725;DP=435;FS=38.473;HRun=0;HaplotypeScore=101.5788;InbreedingCoeff=0.4858;MQ=54.52;MQ0=13;MQRankSum=-1.092;QD=5.23;ReadPosRankSum=0.743;VQSLOD=0.2094;culprit=QD;set=inputR	GT:AD:DP:GQ:PL	1/1:22,6:28:1.73:59,2,0	./.	0/0:35,0:24:6.02:0,6,77	0/0:24,0:13:9.03:0,9,125	1/1:19,5:24:3:61,3,0	0/0:6,6:11:2.99:0,3,23	1/1:6,4:11:6.02:102,6,0	0/1:21,0:26:0:1,0,0	1/1:9,2:11:3.01:61,3,0	1/1:9,2:11:6.02:106,6,0	1/1:8,6:15:6.01:122,6,0	1/1:9,3:13:3.01:61,3,0	1/1:12,4:17:5.10:158,5,0	./.	1/1:7,2:9:3.01:61,3,0	1/1:4,3:6:9.03:183,9,0	0/0:18,0:35:21.07:0,21,526	0/0:12,0:11:9.92:0,10,217	1/1:8,5:10:11.43:115,11,0	./.	1/1:12,1:14:2.99:25,3,0	1/1:15,1:15:3.01:61,3,0	1/1:11,4:15:8.81:98,9,0	0/0:12,0:12:3.01:0,3,47	1/1:4,4:8:6.02:122,6,0	1/1:17,0:17:6.01:70,6,0	1/1:13,0:19:9.03:126,9,0	./.
chr10_random	513893	.	TA	T	10665.31	PASS	AB=1.000;AC=47;AF=0.870;AN=54;BaseQRankSum=8.320;DP=463;FS=14.616;HRun=5;HaplotypeScore=145.8843;InbreedingCoeff=0.8736;MQ=67.52;MQ0=0;MQRankSum=-2.351;QD=25.27;ReadPosRankSum=1.762;VQSLOD=3.1140;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	1/1:1,28:29:69.19:783,69,0	1/1:0,6:6:18.05:204,18,0	0/0:8,0:7:18.05:0,18,231	0/1:12,0:11:0.93:1,0,186	1/1:0,17:17:36.10:408,36,0	1/1:1,20:21:45.13:510,45,0	1/1:2,15:17:27.07:306,27,0	1/1:5,35:40:99:1113,99,0	1/1:1,18:19:48.13:545,48,0	1/1:3,22:25:72.19:799,72,0	1/1:2,15:17:39.11:442,39,0	1/1:0,14:14:27.07:306,27,0	1/1:0,25:25:54:612,54,0	1/1:0,11:11:27.08:306,27,0	1/1:1,15:16:36.10:408,36,0	1/1:0,9:9:18.05:204,18,0	0/0:12,0:12:36.12:0,36,492	0/0:17,0:17:45.13:0,45,598	1/1:0,19:19:51.13:567,51,0	1/1:0,18:18:36.10:408,36,0	1/1:1,11:10:20.40:237,20,0	1/1:1,2:3:6:58,6,0	1/1:0,8:8:21.06:238,21,0	./.	1/1:1,15:16:27.07:306,27,0	1/1:5,22:27:66.19:748,66,0	1/1:2,32:33:81.23:919,81,0	1/1:0,7:7:21.06:238,21,0
chr10_random	514192	.	GAAAA	G	16762	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.726;DP=626;FS=23.234;HRun=13;HaplotypeScore=158.7961;InbreedingCoeff=0.9899;MQ=63.75;MQ0=3;MQRankSum=-5.576;QD=28.56;ReadPosRankSum=4.479;VQSLOD=1.6105;culprit=HaplotypeScore;set=inputR	GT:AD:DP:GQ:PL	1/1:6,22:28:53.88:700,54,0	1/1:1,9:10:24.06:351,24,0	0/0:22,0:20:33.11:0,33,638	0/0:13,0:12:20.31:0,20,326	1/1:4,37:40:89.92:1210,90,0	1/1:2,18:20:48.04:652,48,0	1/1:7,13:20:20.94:282,21,0	1/1:5,32:37:96.10:1223,96,0	1/1:2,25:27:59.93:812,60,0	1/1:2,31:32:90.22:1238,90,0	1/1:3,17:20:44.90:584,45,0	1/1:3,15:18:35.94:467,36,0	1/1:4,19:23:42.08:614,42,0	1/1:4,17:21:45.07:633,45,0	1/1:5,20:25:44.99:607,45,0	1/1:5,28:33:50.68:950,51,0	1/1:0,14:14:33.11:483,33,0	1/1:1,12:13:27.08:395,27,0	1/1:9,15:24:45.04:623,45,0	1/1:26,0:26:27.02:395,27,0	1/1:0,10:10:20.99:280,21,0	1/1:2,13:14:33.80:469,34,0	1/1:0,25:25:59.93:796,60,0	1/1:2,15:17:33.10:482,33,0	1/1:1,17:18:35.83:421,36,0	1/1:1,23:24:66.18:951,66,0	1/1:6,27:33:56.77:749,57,0	1/1:3,9:12:27:395,27,0
chr10_random	514197	.	AAAAA	A	16761.72	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.527;DP=606;FS=25.556;HRun=8;HaplotypeScore=146.4630;InbreedingCoeff=0.9911;MQ=60.08;MQ0=3;MQRankSum=-5.789;QD=29.41;ReadPosRankSum=5.232;VQSLOD=1.1242;culprit=HaplotypeScore;set=inputR	GT:AD:DP:GQ:PL	1/1:26,0:26:53.90:700,54,0	1/1:10,0:10:24.06:351,24,0	0/0:23,0:17:33.11:0,33,638	0/0:13,0:11:23.22:0,23,342	1/1:40,0:39:89.92:1210,90,0	1/1:21,0:21:47.98:652,48,0	1/1:17,0:17:20.96:282,21,0	1/1:36,0:36:96.09:1223,96,0	1/1:26,0:26:59.93:812,60,0	1/1:32,0:31:90.23:1238,90,0	1/1:20,0:20:44.88:584,45,0	1/1:18,0:18:35.94:467,36,0	1/1:22,0:22:42.09:614,42,0	1/1:20,0:20:45.03:633,45,0	1/1:24,0:24:44.95:607,45,0	1/1:32,0:32:50.65:950,51,0	1/1:14,0:14:33.11:483,33,0	1/1:13,0:13:27.08:395,27,0	1/1:20,0:20:45.05:623,45,0	1/1:0,22:22:27.04:395,27,0	1/1:11,0:11:20.96:280,21,0	1/1:19,0:18:33.73:469,34,0	1/1:25,0:25:59.93:796,60,0	1/1:16,0:16:33.10:483,33,0	1/1:18,0:18:35.80:421,36,0	1/1:25,0:25:66.16:951,66,0	1/1:31,0:31:56.75:749,57,0	1/1:12,0:12:27:395,27,0
chr10_random	514462	.	AT	A	12488.68	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=1.950;DP=556;FS=8.251;HRun=8;HaplotypeScore=81.1675;InbreedingCoeff=0.9881;MQ=73.24;MQ0=0;MQRankSum=-3.793;QD=25.28;ReadPosRankSum=1.828;VQSLOD=5.4761;culprit=HaplotypeScore;set=inputR	GT:AD:DP:GQ:PL	1/1:2,29:31:81.13:782,81,0	1/1:0,7:7:18.03:174,18,0	0/0:22,0:20:39.55:0,40,410	0/0:8,0:8:15.01:0,15,150	1/1:3,22:25:62.86:564,63,0	1/1:2,25:27:69.11:666,69,0	1/1:2,16:18:39.06:377,39,0	1/1:3,27:30:78.10:746,78,0	1/1:0,12:12:33.05:319,33,0	1/1:1,20:21:60.07:570,60,0	1/1:1,25:26:75.04:712,75,0	1/1:3,10:13:30.04:290,30,0	1/1:3,18:21:51.08:492,51,0	1/1:0,13:13:39.06:377,39,0	1/1:1,10:11:30.04:290,30,0	1/1:2,20:22:57.09:550,57,0	0/0:20,0:20:57.17:0,57,689	0/0:12,0:12:30.09:0,30,362	1/1:3,25:28:75.08:712,75,0	1/1:7,23:30:89.78:798,90,0	1/1:3,9:12:30:280,30,0	1/1:0,16:16:41.98:393,42,0	1/1:1,27:28:72.12:695,72,0	1/1:3,15:18:42.06:406,42,0	1/1:2,12:14:36.05:347,36,0	1/1:0,24:24:72.08:684,72,0	1/1:0,42:42:99:1120,117,0	1/1:0,5:5:15.02:145,15,0
chr10_random	514463	.	TT	T	12488.66	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=1.950;DP=556;FS=8.251;HRun=7;HaplotypeScore=80.5184;InbreedingCoeff=0.9881;MQ=72.46;MQ0=0;MQRankSum=-3.465;QD=25.23;ReadPosRankSum=1.741;VQSLOD=5.3772;culprit=HaplotypeScore;set=inputR	GT:AD:DP:GQ:PL	1/1:29,0:29:81.13:782,81,0	1/1:7,0:7:18.03:174,18,0	0/0:21,0:19:39.55:0,40,410	0/0:8,0:8:15.01:0,15,150	1/1:27,0:27:62.85:564,63,0	1/1:26,0:26:69.11:666,69,0	1/1:18,0:18:39.06:377,39,0	1/1:30,0:30:78.10:746,78,0	1/1:13,0:13:33.05:319,33,0	1/1:21,0:21:60.07:570,60,0	1/1:25,0:25:75.04:712,75,0	1/1:13,0:13:30.04:290,30,0	1/1:20,0:20:51.08:492,51,0	1/1:14,0:14:39.06:377,39,0	1/1:11,0:11:30.04:290,30,0	1/1:22,0:22:57.09:550,57,0	0/0:20,0:20:57.17:0,57,689	0/0:12,0:12:30.09:0,30,362	1/1:28,0:28:75.08:712,75,0	1/1:24,7:31:89.77:798,90,0	1/1:12,0:12:30:280,30,0	1/1:16,0:16:41.98:393,42,0	1/1:28,0:28:72.12:695,72,0	1/1:18,0:18:42.06:406,42,0	1/1:14,0:14:36.05:347,36,0	1/1:25,0:25:72.08:684,72,0	1/1:42,0:42:99:1120,117,0	1/1:5,0:5:15.02:145,15,0
chr10_random	542841	.	GA	G	172.43	PASS	AB=0.878;AC=3;AF=0.50;AN=6;BaseQRankSum=-0.336;DP=66;FS=4.481;HRun=1;HaplotypeScore=147.6487;MQ=150.63;MQ0=9;MQRankSum=-0.560;QD=2.65;ReadPosRankSum=0.336;VQSLOD=-0.3174;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	./.	./.	1/1:20,7:18:8.38:127,8,0	0/1:29,5:14:31.62:115,0,32	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/0:1,0:1:3.01:0,3,47	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10_random	542842	.	AC	A	199.49	PASS	AB=0.925;AC=3;AF=0.50;AN=6;BaseQRankSum=-0.454;DP=65;FS=2.017;HRun=4;HaplotypeScore=144.2838;MQ=148.48;MQ0=9;MQRankSum=-0.371;QD=3.12;ReadPosRankSum=1.278;VQSLOD=-0.2154;culprit=QD;set=inputR	GT:AD:DP:GQ:PL	./.	./.	1/1:23,3:17:14.71:150,15,0	0/1:33,3:14:19.17:120,0,19	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/0:1,0:1:3.01:0,3,31	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10_random	556879	.	T	TG	884.73	PASS	AB=0.705;AC=12;AF=0.214;AN=56;BaseQRankSum=5.624;DP=322;FS=3.436;HRun=7;HaplotypeScore=54.4483;InbreedingCoeff=0.6094;MQ=77.27;MQ0=0;MQRankSum=0.700;QD=10.17;ReadPosRankSum=-1.431;VQSLOD=1.2011;culprit=HaplotypeScore;set=inputR	GT:AD:DP:GQ:PL	1/1:18,1:22:17.68:132,18,0	0/0:3,0:3:9.01:0,9,87	0/0:6,0:6:8.67:0,9,80	0/0:14,0:14:31.97:0,32,271	0/0:9,0:9:21.03:0,21,203	0/0:15,0:15:32.98:0,33,300	0/0:14,0:14:39.06:0,39,376	0/0:22,0:22:45.03:0,45,425	0/0:7,0:7:21.03:0,21,202	1/1:8,6:14:18.05:206,18,0	0/1:4,2:6:2.92:86,0,3	0/0:14,0:14:36.05:0,36,342	0/0:9,0:9:27.04:0,27,260	0/0:8,0:8:21.03:0,21,202	0/1:4,4:8:0.82:126,0,1	1/1:4,3:7:11.99:126,12,0	0/0:25,0:25:72.11:0,72,695	0/1:7,8:15:34.42:276,0,34	0/0:14,0:14:33.01:0,33,310	0/0:5,0:5:15.01:0,15,139	0/0:22,0:22:53.98:0,54,498	0/0:4,0:4:9.01:0,9,83	0/0:8,0:8:18.78:0,19,161	0/0:18,0:18:50.76:0,51,480	1/1:4,2:6:3.01:35,3,0	0/1:6,3:9:6.84:62,0,7	0/0:11,0:11:30.04:0,30,289	0/0:7,0:7:18.03:0,18,174
chr10_random	557045	.	T	TA	576.09	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.417;DP=469;FS=0.000;HRun=5;HaplotypeScore=78.3828;InbreedingCoeff=0.7820;MQ=64.37;MQ0=0;MQRankSum=-0.587;QD=28.80;ReadPosRankSum=0.879;VQSLOD=3.9529;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,105,1116	0/0:4,0:4:12.03:0,12,129	0/0:5,0:5:9.02:0,9,96	0/0:6,0:6:3.23:0,3,117	1/1:1,19:20:51.17:671,51,0	0/0:15,0:15:45.11:0,45,482	0/0:16,0:16:42.10:0,42,451	0/0:25,0:25:75.18:0,75,799	0/0:13,0:13:36.07:0,36,377	0/0:23,0:23:66.13:0,66,697	0/0:13,0:13:32.72:0,33,354	0/0:11,0:11:33.08:0,33,355	0/0:13,0:13:36.07:0,36,378	0/0:16,0:16:45.10:0,45,475	0/0:13,0:13:36.08:0,36,379	0/0:8,0:8:21.01:0,21,213	0/0:27,0:27:72.18:0,72,773	0/0:19,0:19:51.13:0,51,548	0/0:25,0:25:65.89:0,66,695	0/0:20,0:20:57.12:0,57,601	0/0:19,0:19:57.14:0,57,612	0/0:6,0:6:18.05:0,18,193	0/0:15,0:15:36.08:0,36,386	0/0:7,0:7:21.04:0,21,218	0/0:18,0:18:51.13:0,51,548	0/0:23,0:23:66.15:0,66,697	0/0:19,0:19:54.14:0,54,580	0/0:29,0:29:84.21:0,84,903
chr10_random	557797	.	CTAA	C	10029.76	PASS	AB=0.588;AC=49;AF=0.875;AN=56;BaseQRankSum=13.142;DP=415;FS=32.956;HRun=0;HaplotypeScore=204.3729;InbreedingCoeff=0.7829;MQ=87.71;MQ0=0;MQRankSum=-13.220;QD=29.59;ReadPosRankSum=4.925;VQSLOD=3.2510;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	1/1:3,21:24:53.08:571,53,0	1/1:0,8:8:21.06:242,21,0	0/0:15,0:15:45.11:0,45,912	0/0:29,0:30:77.87:0,78,1539	1/1:0,11:11:23.90:271,24,0	1/1:2,9:11:27.04:298,27,0	1/1:2,10:11:33.04:365,33,0	1/1:1,8:9:24.07:288,24,0	1/1:1,12:13:39.10:435,39,0	1/1:1,15:16:35.74:542,36,0	1/1:0,11:11:27.96:311,28,0	1/1:1,22:23:69.19:786,69,0	1/1:1,11:12:26.54:369,27,0	1/1:3,16:19:51.83:565,52,0	1/1:2,16:18:34.87:548,35,0	1/1:0,7:7:21.06:243,21,0	0/0:31,0:31:93.32:0,93,2243	1/1:1,4:5:15:160,15,0	1/1:2,9:11:17.84:325,18,0	1/1:1,17:18:46.64:499,47,0	0/1:3,7:10:16.22:153,0,16	1/1:1,27:28:58.19:812,58,0	1/1:0,16:16:48.14:547,48,0	1/1:3,12:15:27.03:295,27,0	1/1:1,17:18:54.12:612,54,0	1/1:1,12:13:25.16:421,25,0	1/1:1,9:10:30.07:339,30,0	1/1:0,1:1:3.01:34,3,0
chr10_random	557801	.	CTGTAAGT	C	18408.90	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=12.038;DP=393;FS=42.447;HRun=0;HaplotypeScore=196.3300;InbreedingCoeff=0.9246;MQ=89.96;MQ0=0;MQRankSum=-12.511;QD=57.71;ReadPosRankSum=3.338;VQSLOD=2.9084;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	1/1:0,21:21:59.93:1065,60,0	1/1:0,8:8:21.07:439,21,0	0/0:17,0:17:33.39:0,33,1728	0/0:28,0:28:69.08:0,69,2098	1/1:0,11:11:29.74:522,30,0	1/1:0,9:9:27.09:539,27,0	1/1:2,10:11:33.11:663,33,0	1/1:0,11:11:33.06:587,33,0	1/1:0,12:12:36.12:749,36,0	1/1:0,15:15:45.15:975,45,0	1/1:0,11:11:33.07:622,33,0	1/1:0,22:22:66.23:1378,66,0	1/1:0,11:11:33.11:688,33,0	1/1:1,16:17:51.15:1013,51,0	1/1:0,16:16:48.16:997,48,0	1/1:0,7:7:21.07:440,21,0	0/0:29,0:29:87.30:0,87,3505	1/1:0,4:4:12.04:253,12,0	1/1:0,9:9:27.09:588,27,0	1/1:0,17:17:48.16:952,48,0	1/1:0,8:8:20.89:349,21,0	1/1:0,27:27:81.11:1586,81,0	1/1:0,16:16:48.16:998,48,0	1/1:2,12:14:23.87:477,24,0	1/1:1,16:18:54.18:1107,54,0	1/1:0,12:12:36.12:772,36,0	1/1:1,9:10:30.08:591,30,0	1/1:0,1:1:3.01:62,3,0
chr10_random	557883	.	A	ACACACACACACACACG	22732.85	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=3.226;DP=559;FS=10.163;HRun=0;HaplotypeScore=296.0559;InbreedingCoeff=0.2679;MQ=39.32;MQ0=22;MQRankSum=-7.780;QD=55.58;ReadPosRankSum=6.843;VQSLOD=3.0601;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	1/1:26,0:26:12.02:651,12,0	0/1:6,0:6:11.97:146,0,12	0/0:31,0:17:13.90:0,14,185	0/0:33,0:13:32.78:0,33,310	1/1:20,0:18:5.18:235,5,0	1/1:14,0:14:21.07:999,21,0	1/1:27,0:24:17.45:772,17,0	0/1:20,0:15:65.85:429,0,66	1/1:11,0:10:16.30:597,16,0	1/1:24,2:26:60:2724,60,0	1/1:16,3:19:14.13:879,14,0	0/1:19,0:18:75.77:660,0,76	0/1:16,0:14:63.83:527,0,64	1/1:27,0:25:14.17:1906,14,0	1/1:17,3:22:38.88:2088,39,0	1/1:15,7:22:42.05:2609,42,0	0/0:22,0:22:51.13:0,51,1775	1/1:5,0:6:12.04:551,12,0	0/1:17,0:12:49.45:355,0,49	0/0:25,0:24:2.50:0,2,25	0/0:13,0:9:3.45:0,3,39	0/0:26,0:26:8.50:0,8,71	0/1:14,0:14:12.04:365,0,12	0/1:17,0:17:12.93:391,0,13	1/1:20,6:26:27.09:1757,27,0	1/1:34,0:32:76.28:3268,76,0	0/1:12,0:11:52.83:500,0,53	1/1:4,0:4:6.02:322,6,0
chr10_random	557925	.	ATGCCTT	A	9767.87	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=7.773;DP=407;FS=14.048;HRun=0;HaplotypeScore=118.1806;InbreedingCoeff=0.9226;MQ=75.98;MQ0=0;MQRankSum=-11.461;QD=42.29;ReadPosRankSum=2.168;VQSLOD=3.8233;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	1/1:2,17:19:42.14:950,42,0	1/1:1,6:7:18.06:407,18,0	0/0:18,0:18:42.14:0,42,1307	0/0:30,0:29:69.20:0,69,2014	1/1:0,9:9:17.97:264,18,0	1/1:2,7:8:18.06:407,18,0	1/1:2,9:11:21.07:442,21,0	1/1:4,5:8:10.25:267,10,0	1/1:0,7:7:15.05:339,15,0	1/1:1,18:18:51.18:1151,51,0	1/1:1,13:14:33.03:620,33,0	0/0:15,0:15:45.15:0,45,1513	0/0:13,0:13:39.13:0,39,1347	0/0:12,0:12:30.10:0,30,930	1/1:5,9:14:21.07:475,21,0	1/1:4,14:18:36.12:814,36,0	0/0:30,0:30:72.25:0,72,2488	1/1:1,5:6:12.04:272,12,0	1/1:8,1:9:3.01:53,3,0	1/1:4,11:15:30.06:600,30,0	1/1:4,5:9:3.01:39,3,0	0/0:20,0:20:54.19:0,54,1821	0/0:12,0:12:33.11:0,33,1117	0/0:26,0:26:66.23:0,66,2155	1/1:4,16:20:42.14:950,42,0	1/1:4,15:19:42.12:905,42,0	1/1:3,9:12:24.08:543,24,0	1/1:1,4:5:12.04:271,12,0
chr10_random	557926	.	TGCCTTT	T	9767.87	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=7.773;DP=402;FS=14.048;HRun=0;HaplotypeScore=117.1288;InbreedingCoeff=0.9226;MQ=76.31;MQ0=0;MQRankSum=-11.017;QD=43.03;ReadPosRankSum=1.684;VQSLOD=3.7470;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	1/1:19,0:19:42.14:950,42,0	1/1:7,0:7:18.06:407,18,0	0/0:18,0:18:42.14:0,42,1307	0/0:28,0:29:69.20:0,69,2014	1/1:9,0:9:17.97:264,18,0	1/1:8,0:7:18.06:407,18,0	1/1:11,0:11:21.07:442,21,0	1/1:9,0:8:10.25:267,10,0	1/1:7,0:7:15.05:339,15,0	1/1:19,0:18:51.18:1151,51,0	1/1:14,0:14:33.03:620,33,0	0/0:15,0:15:45.15:0,45,1513	0/0:13,0:13:39.13:0,39,1347	0/0:12,0:12:30.10:0,30,930	1/1:14,0:14:21.07:475,21,0	1/1:18,0:18:36.12:814,36,0	0/0:30,0:30:72.25:0,72,2488	1/1:6,0:6:12.04:272,12,0	1/1:7,0:7:3.01:53,3,0	1/1:11,4:15:30.06:600,30,0	1/1:9,0:9:3.01:39,3,0	0/0:20,0:20:54.19:0,54,1821	0/0:12,0:12:33.11:0,33,1117	0/0:26,0:26:66.23:0,66,2155	1/1:20,0:20:42.14:950,42,0	1/1:18,0:18:42.12:905,42,0	1/1:12,0:11:24.08:543,24,0	1/1:5,0:5:12.04:271,12,0
chr10_random	558043	.	TAAACC	T	5072.24	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=5.767;DP=625;FS=10.510;HRun=0;HaplotypeScore=115.4131;InbreedingCoeff=0.9344;MQ=51.75;MQ0=11;MQRankSum=-0.476;QD=26.56;ReadPosRankSum=4.095;VQSLOD=4.0897;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	1/1:11,33:45:47.83:832,48,0	0/0:5,0:11:12.51:0,13,200	0/0:26,0:9:5.91:0,6,87	0/0:41,0:18:24.52:0,25,363	0/0:10,0:28:34.29:0,34,444	0/0:11,0:20:18.05:0,18,249	0/0:22,0:21:27.82:0,28,492	0/0:27,0:23:36.04:0,36,435	0/0:16,0:16:21.07:0,21,382	1/1:10,8:17:21.06:327,21,0	1/1:6,10:16:33.03:567,33,0	0/0:17,0:16:39.13:0,39,1010	0/0:22,0:22:33.18:0,33,1210	0/0:28,0:28:60.03:0,60,1387	1/1:9,19:28:42.14:766,42,0	1/1:9,8:17:18.06:336,18,0	0/0:36,0:35:81.28:0,81,2152	1/1:6,20:26:45.15:839,45,0	0/0:9,0:13:21.33:0,21,279	0/0:17,0:16:8.88:0,9,73	0/0:10,0:10:5.61:0,6,72	0/0:21,0:21:57.16:0,57,1348	0/0:17,0:17:23.97:0,24,462	0/0:30,0:30:69.24:0,69,1736	1/1:3,15:18:30.10:559,30,0	1/1:5,18:23:54.04:847,54,0	0/0:10,0:22:23.70:0,24,425	0/0:5,0:5:9.01:0,9,143
chr10_random	558316	.	AC	A	987.93	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=9.481;DP=340;FS=16.712;HRun=1;HaplotypeScore=59.6482;InbreedingCoeff=0.8402;MQ=58.31;MQ0=1;MQRankSum=-1.294;QD=10.08;ReadPosRankSum=2.029;VQSLOD=-0.0319;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	0/1:21,0:21:17.06:17,0,147	0/0:3,0:3:3.01:0,3,47	0/0:21,0:14:42.12:0,42,565	0/0:13,0:8:23.28:0,23,277	0/0:16,0:16:39.13:0,39,566	0/0:10,0:10:24.06:0,24,325	0/0:15,0:15:42.05:0,42,551	0/0:15,0:15:39.08:0,39,442	0/0:9,0:9:27.09:0,27,396	1/1:2,11:13:27.13:197,27,0	1/1:2,7:9:10.16:89,10,0	0/0:11,0:11:29.69:0,30,419	0/0:6,0:6:13.63:0,14,193	0/0:4,0:4:12.04:0,12,184	1/1:1,5:6:7.93:88,8,0	1/1:0,9:9:26.82:191,27,0	0/0:9,0:9:27.09:0,27,395	1/1:4,10:14:15.32:195,15,0	0/0:13,0:13:36.11:0,36,497	0/0:15,0:15:33.09:0,33,492	0/0:13,0:13:39.12:0,39,543	0/0:8,0:8:21.07:0,21,302	0/0:9,0:9:20.26:0,20,300	0/0:26,0:26:78.06:0,78,1093	1/1:4,10:14:37.96:230,38,0	1/1:2,10:11:13.19:173,13,0	0/0:20,0:20:57.18:0,57,809	0/0:6,0:6:18.06:0,18,268
chr10_random	558318	.	AC	A	878.61	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.503;DP=332;FS=11.235;HRun=1;HaplotypeScore=59.0968;InbreedingCoeff=0.8599;MQ=58.43;MQ0=1;MQRankSum=-0.406;QD=11.71;ReadPosRankSum=4.035;VQSLOD=0.8424;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	0/0:21,0:21:52.59:0,53,676	0/0:2,0:2:3.01:0,3,48	0/0:21,0:14:42.14:0,42,606	0/0:15,0:9:25.26:0,25,327	0/0:16,0:16:39.13:0,39,592	0/0:9,0:9:24.08:0,24,363	0/0:13,0:13:39.13:0,39,582	0/0:13,0:13:33.10:0,33,448	0/0:9,0:9:27.09:0,27,411	1/1:1,11:12:21.98:191,22,0	1/1:1,7:8:2.88:63,3,0	0/0:11,0:11:30.10:0,30,467	0/0:6,0:6:16.30:0,16,233	0/0:4,0:4:12.04:0,12,192	1/1:1,5:6:3.61:83,4,0	1/1:0,9:9:26.77:191,27,0	0/0:8,0:8:24.08:0,24,374	1/1:3,10:13:6.78:186,7,0	0/0:12,0:12:33.11:0,33,488	0/0:15,0:15:33.11:0,33,525	0/0:13,0:13:39.13:0,39,573	0/0:8,0:8:21.07:0,21,316	0/0:9,0:9:25.33:0,25,357	0/0:26,0:26:78.26:0,78,1193	1/1:4,10:14:26.09:150,26,0	1/1:3,10:12:7.54:191,8,0	0/0:20,0:20:57.17:0,57,822	0/0:6,0:6:18.06:0,18,278
chr10_random	558405	.	AG	A	273.66	PASS	AC=14;AF=0.467;AN=30;BaseQRankSum=0.038;DP=52;FS=5.401;HRun=5;HaplotypeScore=19.0649;InbreedingCoeff=0.4574;MQ=126.68;MQ0=0;MQRankSum=-1.074;QD=15.20;ReadPosRankSum=-0.499;VQSLOD=1.3158;culprit=HaplotypeScore;set=inputR	GT:AD:DP:GQ:PL	0/0:8,0:8:18.06:0,18,245	./.	0/0:6,0:6:11.41:0,11,66	0/0:5,0:5:1.74:0,2,23	./.	1/1:0,3:3:9.03:102,9,0	1/1:2,3:5:3.21:63,3,0	1/1:0,2:2:3.01:34,3,0	1/1:0,1:1:3.01:34,3,0	./.	./.	./.	0/0:2,0:2:3.01:0,3,41	0/0:1,0:1:3:0,3,27	./.	./.	./.	0/0:3,0:3:6:0,6,63	./.	./.	1/1:0,3:3:9.03:102,9,0	./.	0/0:1,0:1:3.01:0,3,41	./.	0/0:2,0:2:3.01:0,3,41	./.	1/1:1,2:3:0.19:30,0,0	1/1:1,0:1:2.99:24,3,0
chr10_random	559407	.	AAGAGAGAGAGAGAGAGAGAGAGAGAGAG	A	2558.13	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=6.626;DP=432;FS=53.044;HRun=0;HaplotypeScore=266.7454;InbreedingCoeff=0.5288;MQ=73.04;MQ0=9;MQRankSum=-5.539;QD=21.86;ReadPosRankSum=-1.868;VQSLOD=0.9160;culprit=QD;set=inputR	GT:AD:DP:GQ:PL	0/0:22,0:22:10.39:0,10,446	0/1:8,0:8:63.55:64,0,357	0/0:23,0:14:3.01:0,3,87	0/0:36,0:23:0:0,0,0	0/0:15,0:15:27.09:0,27,1850	0/1:10,0:9:20.68:21,0,686	0/0:18,0:18:24.06:0,24,736	0/0:21,0:20:20.55:0,21,478	0/1:9,0:8:59.09:59,0,157	0/0:14,0:14:15.05:0,15,1093	0/0:7,0:7:12.04:0,12,1023	1/1:10,6:16:12.04:795,12,0	1/1:11,5:16:11.91:861,12,0	1/1:12,6:18:6.02:430,6,0	0/0:16,0:16:18.06:0,18,1396	0/0:9,0:9:12.51:0,13,1134	0/0:16,0:16:14.22:0,14,604	0/0:18,0:18:24.18:0,24,1629	0/0:14,0:14:15.03:0,15,752	0/0:12,0:12:21.05:0,21,1055	0/0:18,0:15:15.02:0,15,866	1/1:10,7:17:8.99:450,9,0	0/0:11,0:11:0.47:0,0,1	1/1:17,5:23:6.40:41,6,0	0/0:7,0:7:6.02:0,6,507	0/0:17,0:17:27.09:0,27,1552	0/0:15,0:14:27.08:0,27,1077	0/0:6,0:5:12.02:0,12,585
chr10_random	559446	.	AGAGAGAGAGAGAGAGAGAGAGT	A	2945.94	PASS	AB=0.976;AC=19;AF=0.339;AN=56;BaseQRankSum=4.302;DP=554;FS=9.388;HRun=0;HaplotypeScore=259.5503;InbreedingCoeff=-0.3258;MQ=56.23;MQ0=20;MQRankSum=-2.635;QD=8.82;ReadPosRankSum=-0.043;VQSLOD=0.9601;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	0/0:36,0:34:48.76:0,49,811	0/1:6,7:13:17.98:180,0,18	0/1:15,0:5:12.96:13,0,50	0/1:27,0:13:3.48:3,0,117	0/1:28,0:26:12.76:13,0,987	0/1:14,0:13:99:169,0,128	0/1:29,0:29:99:324,0,210	1/1:18,0:17:3.26:175,3,0	0/1:16,1:16:3.44:398,0,3	0/0:23,0:23:30.22:0,30,1607	0/0:17,0:17:35.98:0,36,955	0/1:20,0:18:39.01:467,0,39	0/1:15,0:14:99:518,0,287	0/1:15,0:14:65.93:254,0,66	0/0:22,0:22:56.24:0,56,1640	0/0:19,0:18:48.07:0,48,1866	0/0:17,0:16:43.28:0,43,838	0/0:21,0:21:49.60:0,50,1718	0/1:10,0:10:99:123,0,306	0/1:15,0:15:33.77:34,0,511	0/1:24,0:21:82.65:83,0,702	0/1:17,0:15:95.43:250,0,95	0/0:17,0:16:35.40:0,35,246	0/1:29,0:29:7.10:7,0,295	0/0:19,0:18:38.29:0,38,747	0/0:29,0:28:72.07:0,72,2304	0/1:22,0:20:83.56:84,0,471	0/1:6,0:5:12.91:13,0,253
chr10_random	559466	.	AGT	A	3146.01	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=0.135;DP=593;FS=11.406;HRun=0;HaplotypeScore=104.1590;InbreedingCoeff=0.6976;MQ=58.58;MQ0=11;MQRankSum=-2.332;QD=10.05;ReadPosRankSum=-0.313;VQSLOD=2.3250;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	0/0:27,0:27:48.69:0,49,466	1/1:7,0:7:2.70:26,3,0	0/1:34,0:20:11.14:11,0,325	0/1:35,0:21:6.38:6,0,303	1/1:1,19:20:8.86:57,9,0	1/1:14,0:12:32.88:260,33,0	1/1:26,0:26:62.56:501,63,0	1/1:34,0:34:80.94:742,81,0	1/1:21,0:20:50.95:425,51,0	0/1:21,0:21:28.78:29,0,308	0/0:21,0:21:28.93:0,29,349	0/0:26,0:24:27.64:0,28,195	0/0:21,0:20:21.78:0,22,265	0/0:19,0:18:26.95:0,27,191	0/0:23,0:23:60.26:0,60,484	0/0:18,0:18:47.94:0,48,400	0/0:23,0:22:53.78:0,54,449	0/0:16,0:16:41.84:0,42,331	1/1:11,0:11:29.95:254,30,0	1/1:15,0:15:38.79:321,39,0	1/1:19,0:17:35.94:300,36,0	0/0:18,0:16:23.96:0,24,152	0/0:19,0:18:41.39:0,41,296	0/1:36,0:36:9.96:10,0,254	0/0:20,0:19:44.95:0,45,375	0/0:29,0:28:74.03:0,74,611	1/1:15,0:15:38.90:318,39,0	1/1:5,0:5:11.98:99,12,0
chr10_random	560051	.	TGTGCGTGT	T	2124.53	PASS	AB=1.000;AC=23;AF=0.426;AN=54;BaseQRankSum=6.595;DP=651;FS=1.618;HRun=0;HaplotypeScore=235.5789;InbreedingCoeff=0.1313;MQ=63.44;MQ0=6;MQRankSum=-2.497;QD=5.18;ReadPosRankSum=2.282;VQSLOD=2.6605;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	0/1:54,0:53:10.73:32,0,11	0/1:11,0:11:19:189,0,19	0/0:30,0:26:38.15:0,38,920	0/0:24,0:21:45.95:0,46,962	1/1:12,0:12:6.18:42,6,0	0/1:14,0:14:8:123,0,8	0/1:28,0:28:12.15:190,0,12	0/1:16,0:16:42.93:86,0,43	1/1:20,0:20:6.84:351,7,0	0/1:41,0:40:37.23:198,0,37	0/1:13,0:13:12.37:12,0,49	0/0:26,0:26:57.15:0,57,1611	0/0:21,0:20:41.55:0,42,1236	0/0:25,0:24:51.17:0,51,1352	1/1:31,0:31:6.02:116,6,0	1/1:26,0:26:11.93:231,12,0	0/0:21,0:21:48.16:0,48,1461	0/0:10,0:10:17.83:0,18,128	1/1:24,0:23:15.21:264,15,0	./.	0/1:46,0:44:49.37:76,0,49	0/0:14,0:14:21:0,21,534	0/0:13,0:13:19.73:0,20,501	0/0:42,0:41:90.26:0,90,2362	1/1:23,0:24:12.03:200,12,0	0/1:29,0:28:54.75:55,0,149	0/1:15,0:15:68.10:68,0,179	0/1:6,0:6:54.73:73,0,55
chr10_random	560057	.	TGTGTGCGTGTGTGTGTGCGTGCGTGCGTGCGTGCGTGC	T	6058.10	PASS	AB=0.528;AC=15;AF=0.278;AN=54;BaseQRankSum=4.999;DP=614;FS=19.397;HRun=0;HaplotypeScore=488.4860;InbreedingCoeff=0.8329;MQ=55.16;MQ0=9;MQRankSum=-0.549;QD=28.44;ReadPosRankSum=-0.318;VQSLOD=1.1566;culprit=QD;set=inputR	GT:AD:DP:GQ:PL	1/1:7,41:47:9.03:673,9,0	0/0:10,0:10:19.45:0,19,217	0/0:24,0:20:31.18:0,31,945	0/0:19,0:17:30.17:0,30,1126	0/0:12,0:12:14.74:0,15,885	0/0:13,0:13:18.21:0,18,208	0/0:27,0:27:41.96:0,42,649	0/0:17,0:16:41.79:0,42,1358	0/0:17,0:17:32.63:0,33,702	1/1:2,40:41:48.63:1296,49,0	1/1:10,0:10:12.78:114,13,0	0/0:27,0:27:66.07:0,66,5009	0/0:24,0:23:47.48:0,47,3878	0/0:26,0:24:51.15:0,51,4386	1/1:0,31:31:12.04:906,12,0	1/1:1,20:21:11.04:1168,11,0	0/0:20,0:20:54.09:0,54,5946	1/1:10,0:10:3.25:61,3,0	0/0:21,0:19:54.34:0,54,1374	./.	0/0:41,0:38:28.70:0,29,241	0/0:14,0:14:24:0,24,1339	0/0:14,0:14:20.29:0,20,1015	0/0:42,0:41:85.48:0,85,6170	1/1:1,22:23:12.04:1115,12,0	0/1:3,25:27:99:726,0,134	0/0:14,0:14:28.55:0,29,1434	0/0:6,0:6:17.84:0,18,1020
chr10_random	560059	.	TGTGCGTGTGTGTGTGCGTGC	T	6841.07	PASS	AB=1.000;AC=26;AF=0.481;AN=54;BaseQRankSum=2.245;DP=601;FS=2.778;HRun=0;HaplotypeScore=310.0039;InbreedingCoeff=0.4864;MQ=52.09;MQ0=10;MQRankSum=-3.038;QD=18.64;ReadPosRankSum=0.554;VQSLOD=2.8024;culprit=QD;set=inputR	GT:AD:DP:GQ:PL	1/1:44,0:43:8.86:214,9,0	1/1:10,0:10:18.02:616,18,0	0/0:22,0:18:36.11:0,36,767	0/0:18,0:16:33.58:0,34,793	0/1:13,0:13:10.12:10,0,120	1/1:12,0:12:18.02:561,18,0	1/1:27,0:27:36.06:619,36,0	1/1:4,14:17:1.61:474,2,0	0/1:17,0:17:59.70:1149,0,60	0/1:43,0:42:99:395,0,149	0/0:8,0:8:9.01:0,9,124	0/0:27,0:27:63.22:0,63,3069	0/0:24,0:23:47.84:0,48,2483	0/0:25,0:23:51.17:0,51,2501	1/1:31,0:31:7.49:304,7,0	1/1:21,0:21:11.66:557,12,0	0/0:20,0:20:54.17:0,54,3198	0/0:8,0:8:16.87:0,17,217	1/1:6,16:19:50.82:746,51,0	./.	1/1:38,0:35:17.56:220,18,0	0/0:14,0:14:24.01:0,24,908	0/0:13,0:13:19.97:0,20,723	0/0:42,0:41:87.64:0,88,3814	1/1:23,0:23:12.04:528,12,0	0/1:28,0:27:99:113,0,373	0/1:14,0:14:99:234,0,485	0/1:6,0:6:98.74:99,0,344
chr10_random	560063	.	C	CGTGT	2831.71	PASS	AB=1.000;AC=22;AF=0.407;AN=54;BaseQRankSum=-5.547;DP=589;FS=1.754;HRun=0;HaplotypeScore=199.4250;InbreedingCoeff=0.5792;MQ=49.28;MQ0=11;MQRankSum=0.791;QD=9.28;ReadPosRankSum=1.195;VQSLOD=3.2490;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	1/1:43,0:41:5.88:36,6,0	0/0:7,0:10:14.92:0,15,122	0/1:19,0:15:16.82:17,0,81	0/0:15,0:13:17.91:0,18,139	0/0:15,0:15:11.64:0,12,97	0/0:8,0:11:6.90:0,7,53	0/0:25,0:25:20.87:0,21,158	0/0:20,0:19:6.35:0,6,57	0/0:12,0:17:1.85:0,2,212	0/0:42,0:41:8.79:0,9,83	1/1:8,0:8:3:25,3,0	1/1:24,3:27:26.03:513,26,0	1/1:13,9:22:31.54:531,32,0	1/1:25,0:24:33.37:383,33,0	0/1:31,0:31:0.25:0,0,23	0/0:20,0:20:4.01:0,4,52	0/0:21,0:21:53.96:0,54,690	1/1:7,0:7:17.85:127,18,0	0/0:20,0:18:20.54:0,21,144	./.	0/0:34,0:32:2.01:0,2,42	1/1:10,2:12:15.48:191,15,0	1/1:12,2:15:19.06:181,19,0	1/1:42,1:42:71.71:976,72,0	0/1:23,0:23:3.79:4,0,21	0/1:28,0:27:18.46:35,0,18	0/0:13,0:13:20.96:0,21,239	0/0:6,0:7:12.03:0,12,137
chr10_random	560081	.	TGC	T	324.75	PASS	AB=0.980;AC=17;AF=0.340;AN=50;BaseQRankSum=8.361;DP=600;FS=0.000;HRun=0;HaplotypeScore=218.3402;InbreedingCoeff=0.1751;MQ=44.62;MQ0=12;MQRankSum=-4.700;QD=1.18;ReadPosRankSum=2.421;VQSLOD=2.3809;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	0/0:43,0:41:1.86:0,2,15	1/1:7,0:7:9.68:44,10,0	0/0:16,0:7:18.05:0,18,229	0/0:16,0:11:16.58:0,17,189	0/1:14,4:18:9.40:9,0,93	0/1:14,0:14:15.75:16,0,24	0/1:22,0:22:24.45:38,0,24	0/0:31,0:30:19.79:0,20,477	0/1:24,0:24:6.61:124,0,7	1/1:43,0:41:8.52:42,9,0	./.	0/0:25,0:25:60.19:0,60,1023	0/0:24,0:23:48.14:0,48,853	0/0:29,0:27:49.93:0,50,965	0/1:31,0:31:10.24:18,0,10	1/1:20,0:20:11.36:56,11,0	0/0:18,0:18:51.17:0,51,953	./.	0/1:27,0:21:47.99:48,0,172	./.	0/0:35,0:31:3.94:0,4,15	0/0:14,0:14:17.78:0,18,257	0/0:16,0:16:20.08:0,20,316	0/0:44,0:43:81.57:0,82,1228	0/1:23,0:23:3.18:30,0,3	1/1:27,0:26:2.45:14,2,0	0/1:15,0:15:38.79:39,0,48	0/1:5,0:5:3.34:3,0,48
chr10_random	560083	.	CGTGCGTGCGTGCGTGT	C	3833.56	PASS	AB=1.000;AC=24;AF=0.462;AN=52;BaseQRankSum=7.822;DP=617;FS=0.517;HRun=0;HaplotypeScore=286.9519;InbreedingCoeff=0.3418;MQ=45.46;MQ0=11;MQRankSum=-5.570;QD=10.86;ReadPosRankSum=1.008;VQSLOD=1.8887;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	1/1:43,0:41:6.02:136,6,0	1/1:4,3:7:12.51:421,13,0	0/0:17,0:5:15.02:0,15,331	0/0:19,0:13:24.53:0,25,247	0/1:18,0:18:14.10:14,0,88	1/1:9,3:12:20.13:457,20,0	1/1:22,0:22:20.79:232,21,0	0/1:33,0:32:89.02:89,0,545	1/1:18,5:23:13.22:796,13,0	0/1:43,0:41:99:296,0,100	./.	0/0:26,0:26:56.32:0,56,2092	0/0:24,0:23:47.44:0,47,1961	0/0:29,0:27:60.65:0,61,1973	1/1:31,0:31:3.76:211,4,0	1/1:20,0:20:11.98:429,12,0	0/0:20,0:20:60.14:0,60,3091	0/1:4,0:4:0.08:0,0,10	0/1:27,0:21:99:141,0,115	./.	0/0:34,0:30:5.50:0,6,35	0/0:14,0:14:21:0,21,729	0/0:15,0:15:19.71:0,20,562	0/0:44,0:43:72.54:0,73,2385	1/1:23,0:23:12.04:399,12,0	0/1:27,0:27:86.27:86,0,162	0/1:15,0:15:84.57:85,0,468	0/1:5,0:5:41.55:42,0,270
chr10_random	560093	.	TGC	T	901.53	PASS	AB=0.965;AC=23;AF=0.426;AN=54;BaseQRankSum=7.530;DP=646;FS=9.627;HRun=0;HaplotypeScore=204.7655;InbreedingCoeff=-0.0381;MQ=46.04;MQ0=8;MQRankSum=-3.897;QD=2.23;ReadPosRankSum=1.410;VQSLOD=1.8320;culprit=QD;set=inputR	GT:AD:DP:GQ:PL	0/1:45,0:44:26:30,0,26	0/1:6,0:6:11.17:11,0,35	0/1:27,2:13:23.83:24,0,267	0/0:22,0:13:25.24:0,25,261	1/1:17,0:17:8.54:72,9,0	0/0:15,0:15:19.13:0,19,233	0/0:23,0:23:38.25:0,38,385	0/1:30,0:30:44.91:45,0,88	0/0:18,0:18:0.99:0,1,235	1/1:41,0:40:27.57:249,28,0	./.	0/0:28,0:28:58.38:0,58,446	0/0:24,0:24:50.20:0,50,402	0/1:25,2:25:30.41:30,0,279	0/1:33,0:33:46.17:91,0,46	0/1:21,1:21:19.07:53,0,19	0/0:24,0:24:69.18:0,69,1065	0/1:6,1:7:32.85:33,0,44	0/1:26,0:21:41.69:42,0,47	1/1:15,0:15:2.99:23,3,0	0/0:39,0:36:3.17:0,3,13	0/1:17,1:18:14.69:15,0,150	0/1:15,2:17:3.12:3,0,105	0/0:35,1:35:35.02:0,35,430	1/1:24,0:24:11.60:76,12,0	1/1:27,0:27:22.17:233,22,0	0/1:14,0:14:35.61:36,0,42	0/1:7,0:7:6.20:6,0,49
chr10_random	560095	.	C	CGTGT	3541.24	PASS	AB=1.000;AC=33;AF=0.611;AN=54;BaseQRankSum=-2.669;DP=655;FS=40.094;HRun=0;HaplotypeScore=215.2736;InbreedingCoeff=0.3188;MQ=46.51;MQ0=8;MQRankSum=-1.162;QD=6.73;ReadPosRankSum=-2.130;VQSLOD=1.4208;culprit=QD;set=inputR	GT:AD:DP:GQ:PL	0/1:46,0:45:8.70:9,0,12	0/0:6,0:6:15:0,15,145	0/1:31,0:14:12:12,0,143	0/1:21,0:13:9.28:9,0,127	1/1:17,0:17:5.92:42,6,0	0/0:17,0:17:33.95:0,34,250	0/0:25,0:25:44.72:0,45,340	1/1:31,0:31:50.44:332,50,0	0/0:21,0:21:43.37:0,43,371	0/1:41,0:40:51.15:79,0,51	./.	1/1:26,1:28:52.99:578,53,0	1/1:18,4:23:39.01:542,39,0	1/1:26,0:24:29.23:342,29,0	0/1:33,0:33:8.98:9,0,57	0/0:23,0:22:14.63:0,15,102	0/0:24,0:24:62.84:0,63,765	1/1:7,0:7:17.38:117,17,0	1/1:25,0:20:30.23:227,30,0	1/1:15,0:15:3:25,3,0	1/1:39,0:36:1.78:5,2,0	1/1:16,1:18:23.57:267,24,0	1/1:14,2:16:19.10:230,19,0	1/1:35,1:35:45.43:466,45,0	0/1:25,0:25:14.94:15,0,44	0/1:27,0:27:5.45:83,0,5	0/1:14,0:14:46.40:74,0,46	0/1:7,0:7:1.44:78,0,1
chr10_random	560113	.	T	TGTGTGTGA	4174.80	PASS	AB=0.995;AC=23;AF=0.411;AN=56;BaseQRankSum=2.077;DP=645;FS=17.406;HRun=0;HaplotypeScore=250.6827;InbreedingCoeff=0.0172;MQ=60.90;MQ0=4;MQRankSum=-3.816;QD=10.90;ReadPosRankSum=-4.097;VQSLOD=0.3942;culprit=QD;set=inputR	GT:AD:DP:GQ:PL	0/0:32,0:32:14.45:0,14,168	0/1:7,0:7:5.09:5,0,150	0/0:42,0:24:55.13:0,55,839	0/0:33,0:24:47.36:0,47,686	0/1:18,0:18:26.67:27,0,54	0/1:24,0:24:99:175,0,112	0/1:28,0:28:61.56:62,0,196	1/1:34,0:34:94.60:1219,95,0	0/1:26,0:26:99:119,0,322	0/0:26,0:26:7.29:0,7,344	0/0:17,0:17:14.94:0,15,118	0/1:30,0:30:99:187,0,257	0/1:18,0:18:99:381,0,144	0/1:25,0:25:31.46:31,0,164	0/0:18,0:18:0.67:0,1,146	0/0:17,0:16:29.75:0,30,318	0/0:29,0:29:81.16:0,81,1736	0/0:10,0:10:14.35:0,14,115	1/1:24,0:22:59.91:708,60,0	1/1:17,0:18:20.99:223,21,0	0/0:11,18:37:0.93:0,1,2	0/1:15,0:16:81.09:123,0,81	0/1:20,0:20:76.61:77,0,159	0/1:33,0:33:99:140,0,203	0/1:15,0:15:12.03:12,0,110	0/1:23,0:23:3.21:3,0,267	1/1:15,0:18:16:335,16,0	1/1:6,0:6:18.06:348,18,0
chr10_random	560419	.	T	TG	755.18	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.340;DP=689;FS=4.277;HRun=3;HaplotypeScore=73.6564;InbreedingCoeff=0.9805;MQ=90.81;MQ0=0;MQRankSum=-1.272;QD=27.97;ReadPosRankSum=-0.624;VQSLOD=2.6445;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,165,1959	0/0:8,0:8:21.06:0,21,252	0/0:23,0:23:60.63:0,61,699	0/0:32,0:32:75.20:0,75,886	1/1:0,27:27:63.16:850,63,0	0/0:18,0:18:54.17:0,54,648	0/0:33,0:33:87.27:0,87,1043	0/0:22,0:22:63.19:0,63,756	0/0:20,0:20:54.16:0,54,648	0/0:32,0:32:96.29:0,96,1152	0/0:20,0:20:57.17:0,57,681	0/0:21,0:21:60.18:0,60,719	0/0:17,0:17:48.15:0,48,575	0/0:26,0:26:78.24:0,78,935	0/0:25,0:25:66.20:0,66,792	0/0:23,0:23:69.21:0,69,828	0/0:42,0:42:99:0,123,1476	0/0:21,0:21:60.18:0,60,720	0/0:18,0:18:51.15:0,51,605	0/0:18,0:18:45.14:0,45,540	0/0:31,0:31:90.25:0,90,1056	0/0:25,0:25:72.22:0,72,861	0/0:18,0:18:45.14:0,45,540	0/0:34,0:34:93.27:0,93,1103	0/0:21,0:21:60.18:0,60,720	0/0:28,0:28:84.26:0,84,1008	0/0:22,0:22:66.20:0,66,792	0/0:5,0:5:15.05:0,15,179
chr10_random	561033	.	ACTG	A	1130.74	PASS	AB=1.000;AC=25;AF=0.481;AN=52;BaseQRankSum=3.162;DP=585;FS=0.000;HRun=0;HaplotypeScore=99.3731;InbreedingCoeff=0.3809;MQ=69.85;MQ0=3;MQRankSum=-0.144;QD=3.64;ReadPosRankSum=-3.152;VQSLOD=1.3104;culprit=QD;set=inputR	GT:AD:DP:GQ:PL	1/1:21,0:21:14.87:107,15,0	1/1:6,4:10:9.03:113,9,0	0/0:32,0:24:1.30:0,1,62	0/0:33,0:29:7.34:0,7,128	1/1:6,0:6:2.98:22,3,0	1/1:12,6:18:9.03:123,9,0	1/1:23,0:23:35.98:322,36,0	0/0:23,0:23:17.93:0,18,145	1/1:10,20:30:15.05:206,15,0	0/1:26,0:25:11.13:28,0,11	0/1:8,0:8:0:0,0,0	0/1:14,0:14:10.16:10,0,189	0/1:26,0:26:1.44:1,0,147	0/1:28,0:28:10.60:11,0,270	0/0:28,0:29:2.80:0,3,21	0/1:23,0:23:0:0,0,0	0/0:20,0:20:20.14:0,20,482	1/1:11,0:11:3.83:112,4,0	0/0:15,0:15:3.46:0,3,23	0/0:15,0:15:5.90:0,6,37	0/0:34,0:32:21.42:0,21,175	./.	./.	0/1:33,0:33:99:128,0,135	1/1:15,0:15:5.38:36,5,0	1/1:19,0:19:8.99:75,9,0	0/0:40,0:40:65.67:0,66,678	0/0:10,0:10:3.43:0,3,19
chr10_random	561048	.	GCTG	G	1192.68	PASS	AB=1.000;AC=25;AF=0.481;AN=52;BaseQRankSum=2.338;DP=562;FS=0.000;HRun=0;HaplotypeScore=111.9398;InbreedingCoeff=0.3732;MQ=58.63;MQ0=9;MQRankSum=2.912;QD=3.79;ReadPosRankSum=-0.084;VQSLOD=1.9538;culprit=QD;set=inputR	GT:AD:DP:GQ:PL	1/1:19,0:18:13.62:105,14,0	1/1:7,0:7:9.03:113,9,0	0/0:22,0:14:1.30:0,1,62	0/0:25,0:21:7.34:0,7,128	1/1:13,0:13:2.98:22,3,0	1/1:24,0:24:9.03:123,9,0	1/1:30,0:29:41.98:386,42,0	0/0:20,0:20:27:0,27,201	1/1:25,0:25:15.05:206,15,0	0/1:20,0:20:16.87:17,0,84	0/1:11,0:11:0.02:0,0,0	0/1:15,0:15:10.39:10,0,189	0/1:21,0:21:1.44:1,0,147	0/1:30,0:30:10.72:11,0,272	0/0:32,0:32:2.80:0,3,21	0/1:25,0:25:0:0,0,0	0/0:22,0:22:20.13:0,20,482	1/1:11,0:11:3.51:112,4,0	0/0:18,0:16:3.37:0,3,23	0/0:2,10:12:5.90:0,6,37	0/0:37,0:32:21.42:0,21,175	./.	./.	0/1:30,0:30:99:140,0,133	1/1:15,0:15:5.12:36,5,0	1/1:19,0:19:8.99:75,9,0	0/0:37,0:37:65.61:0,66,677	0/0:9,0:9:3.43:0,3,19
chr10_random	561054	.	G	GCTATTACTACTA	1430.33	PASS	AB=0.965;AC=10;AF=0.185;AN=54;BaseQRankSum=7.681;DP=550;FS=0.599;HRun=0;HaplotypeScore=208.4963;InbreedingCoeff=-0.0210;MQ=54.16;MQ0=11;MQRankSum=-7.455;QD=8.27;ReadPosRankSum=-5.778;VQSLOD=0.7178;culprit=QD;set=inputR	GT:AD:DP:GQ:PL	0/1:17,4:26:96.59:97,0,276	0/0:8,0:8:15.05:0,15,410	0/0:19,0:11:29.66:0,30,669	0/0:21,0:17:37.95:0,38,1038	0/1:10,0:10:10.80:11,0,105	0/0:18,0:18:24.08:0,24,704	0/0:30,0:29:87.28:0,87,2562	0/0:26,0:25:41.88:0,42,1350	0/0:24,0:24:27.07:0,27,663	0/1:23,0:23:99:484,0,130	1/1:12,0:12:3.91:122,4,0	0/0:15,0:15:45.14:0,45,1340	0/0:21,0:21:33.10:0,33,1005	0/0:29,0:29:87.28:0,87,2628	0/1:31,0:31:82.89:250,0,83	0/1:24,0:24:18.71:64,0,19	0/0:23,0:23:66.20:0,66,2290	0/1:11,0:11:99:141,0,201	0/0:18,0:16:8.55:0,9,411	0/0:10,0:10:6.02:0,6,165	0/0:31,0:26:19.09:0,19,669	0/0:7,0:6:0:0,0,0	./.	0/0:32,0:32:87.22:0,87,2644	0/1:15,0:15:99:165,0,130	0/1:19,0:19:99:236,0,148	0/0:35,0:35:50.98:0,51,1862	0/0:9,0:9:9.03:0,9,204
chr10_random	561057	.	G	GCTATTACTACTACTA	3761.30	PASS	AB=1.000;AC=20;AF=0.370;AN=54;BaseQRankSum=4.861;DP=554;FS=1.556;HRun=0;HaplotypeScore=223.8246;InbreedingCoeff=0.5071;MQ=53.44;MQ0=14;MQRankSum=-7.689;QD=14.19;ReadPosRankSum=-4.818;VQSLOD=1.7602;culprit=QD;set=inputR	GT:AD:DP:GQ:PL	1/1:28,0:25:31.54:419,32,0	0/0:7,0:7:17.95:0,18,493	0/0:17,0:9:17.97:0,18,378	0/0:20,0:16:32.47:0,32,690	0/1:12,0:12:29.82:57,0,30	0/0:17,0:17:24:0,24,821	0/0:30,0:29:72.24:0,72,2145	0/0:27,0:26:14.28:0,14,1127	0/0:25,0:25:27.08:0,27,815	1/1:22,0:22:35.90:960,36,0	1/1:14,0:14:21.43:271,21,0	0/0:16,0:16:48.15:0,48,1558	0/0:19,0:19:30.10:0,30,1116	0/0:32,0:32:90.24:0,90,3010	1/1:3,21:30:8.36:384,8,0	1/1:0,21:26:3.25:93,3,0	0/0:24,0:24:63.22:0,63,2397	0/1:11,0:11:56.60:383,0,57	0/1:15,0:12:25.20:25,0,196	0/0:11,0:11:6.02:0,6,136	0/1:31,0:26:29.26:29,0,461	0/1:8,0:7:0:0,0,0	./.	0/0:34,0:34:90.26:0,90,3193	1/1:16,0:16:33.86:485,34,0	1/1:16,0:16:47.83:616,48,0	0/1:36,0:36:39.15:39,0,1614	0/0:8,0:8:7.84:0,8,149
chr10_random	561063	.	GCTA	G	1597.98	PASS	AB=0.914;AC=15;AF=0.278;AN=54;BaseQRankSum=-0.541;DP=537;FS=0.000;HRun=0;HaplotypeScore=120.3221;InbreedingCoeff=0.4369;MQ=49.88;MQ0=14;MQRankSum=4.703;QD=8.15;ReadPosRankSum=4.312;VQSLOD=2.8194;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	0/0:28,0:25:5.95:0,6,44	0/1:7,0:7:32.14:48,0,32	0/0:13,0:6:2.22:0,2,7	0/0:13,0:9:5.60:0,6,36	0/0:15,0:15:14.97:0,15,121	0/1:19,0:18:17.81:18,0,160	0/1:29,0:28:17.05:17,0,292	0/0:28,0:27:35.78:0,36,276	0/1:25,0:25:51.39:51,0,94	0/0:19,0:19:38.88:0,39,380	0/0:16,0:15:17.51:0,18,111	1/1:15,3:18:27.01:268,27,0	1/1:9,11:20:6.02:80,6,0	1/1:26,2:28:47.98:452,48,0	0/0:26,0:26:17.88:0,18,148	0/0:24,0:24:5.88:0,6,36	0/0:23,0:23:35.99:0,36,458	0/0:11,0:11:6.45:0,6,58	0/0:12,0:9:8.93:0,9,67	0/0:11,0:11:5.99:0,6,49	0/0:30,0:25:20.90:0,21,191	0/1:3,0:11:0:0,0,0	1/1:3,0:2:3:25,3,0	1/1:25,9:35:77.60:804,78,0	0/0:14,0:14:14.76:0,15,97	0/0:17,0:17:29.76:0,30,219	0/0:34,0:34:44.95:0,45,542	./.
chr10_random	561424	.	AATGGACGG	A	2741.86	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=3.125;DP=554;FS=0.000;HRun=0;HaplotypeScore=148.7641;InbreedingCoeff=0.7694;MQ=58.86;MQ0=5;MQRankSum=0.177;QD=23.24;ReadPosRankSum=-0.829;VQSLOD=2.6554;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,117,2857	1/1:0,6:6:12.04:331,12,0	0/0:17,0:11:24.32:0,24,233	0/0:26,0:22:47.05:0,47,474	1/1:0,8:8:17.81:239,18,0	1/1:2,23:25:30.10:826,30,0	1/1:2,22:24:18.06:496,18,0	0/1:19,0:18:99:199,0,118	1/1:1,14:14:21.07:578,21,0	0/0:20,0:20:50.87:0,51,1361	0/0:14,0:14:21.34:0,21,392	0/0:23,0:23:47.87:0,48,1066	0/0:14,0:14:32.67:0,33,551	0/0:18,0:18:41.15:0,41,610	0/0:33,0:33:92.92:0,93,2627	0/0:19,0:19:50.92:0,51,1349	0/0:31,0:31:86.50:0,87,2102	0/0:26,0:25:74.85:0,75,1765	1/1:14,0:14:7.45:222,7,0	0/1:7,0:7:25.36:37,0,25	0/0:28,0:28:17.04:0,17,85	0/0:13,0:13:26.32:0,26,188	0/0:8,0:8:17.86:0,18,308	0/0:27,0:27:62.88:0,63,999	0/0:16,0:16:41.63:0,42,1020	0/0:19,0:19:54.02:0,54,1475	0/0:29,0:29:10.78:0,11,99	0/0:10,0:10:14.20:0,14,71
chr10_random	561426	.	TGGAC	T	3023.96	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=6.670;DP=557;FS=0.454;HRun=0;HaplotypeScore=112.7313;InbreedingCoeff=0.9840;MQ=58.86;MQ0=5;MQRankSum=-0.328;QD=16.62;ReadPosRankSum=-0.186;VQSLOD=3.3561;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,124,1928	1/1:6,0:6:12.04:143,12,0	0/0:18,0:12:27.33:0,27,277	0/0:27,0:23:53.07:0,53,564	1/1:8,0:8:14.84:125,15,0	1/1:25,0:25:30.09:356,30,0	1/1:22,0:22:18.06:214,18,0	1/1:1,17:17:50.96:451,51,0	1/1:15,0:14:21.06:250,21,0	0/0:19,0:19:53.87:0,54,816	0/0:14,0:14:20.75:0,21,203	0/0:22,0:22:47.61:0,48,588	0/0:13,0:13:32.67:0,33,363	0/0:19,0:19:41.14:0,41,399	0/0:32,0:32:92.84:0,93,1695	0/0:19,0:19:50.92:0,51,897	0/0:32,0:32:90.68:0,91,1457	0/0:27,0:26:74.58:0,75,1034	1/1:2,13:15:38.97:390,39,0	1/1:4,3:7:17.87:225,18,0	1/1:1,27:28:18.06:341,18,0	0/0:13,0:13:26.30:0,26,164	0/0:8,0:8:16.67:0,17,178	0/0:29,0:29:62.76:0,63,644	0/0:16,0:16:40.80:0,41,546	0/0:19,0:19:56.94:0,57,850	1/1:3,25:28:26.96:468,27,0	1/1:0,10:10:15.05:284,15,0
chr10_random	561427	.	GGACG	G	3023.95	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=6.724;DP=556;FS=0.453;HRun=0;HaplotypeScore=112.6496;InbreedingCoeff=0.9841;MQ=58.82;MQ0=5;MQRankSum=-0.401;QD=16.62;ReadPosRankSum=-0.270;VQSLOD=3.3309;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,127,1974	1/1:6,0:6:12.04:143,12,0	0/0:19,0:13:30.34:0,30,336	0/0:27,0:23:53.07:0,53,564	1/1:8,0:8:14.84:125,15,0	1/1:25,0:25:30.09:356,30,0	1/1:22,0:22:18.06:214,18,0	1/1:18,0:17:50.96:451,51,0	1/1:15,0:14:21.06:250,21,0	0/0:19,0:19:53.87:0,54,816	0/0:14,0:14:20.75:0,21,203	0/0:22,0:22:47.61:0,48,588	0/0:13,0:13:32.67:0,33,363	0/0:18,0:18:41.14:0,41,399	0/0:32,0:32:92.84:0,93,1695	0/0:17,0:17:50.92:0,51,897	0/0:32,0:32:90.68:0,91,1457	0/0:27,0:26:74.58:0,75,1034	1/1:15,0:15:38.97:390,39,0	1/1:3,4:7:17.87:225,18,0	1/1:28,0:28:18.06:341,18,0	0/0:13,0:13:26.30:0,26,164	0/0:8,0:8:16.67:0,17,178	0/0:29,0:29:62.76:0,63,644	0/0:15,0:15:40.80:0,41,546	0/0:19,0:19:56.94:0,57,850	1/1:28,0:28:26.96:468,27,0	1/1:10,0:10:15.05:284,15,0
chr10_random	561430	.	C	CGGATGGAT	4411.70	PASS	AB=0.906;AC=26;AF=0.464;AN=56;BaseQRankSum=-1.971;DP=570;FS=2.695;HRun=0;HaplotypeScore=149.6784;InbreedingCoeff=0.6397;MQ=58.50;MQ0=5;MQRankSum=-0.794;QD=14.23;ReadPosRankSum=-1.813;VQSLOD=3.8570;culprit=QD;set=inputR	GT:AD:DP:GQ:PL	0/0:48,0:48:8.19:0,8,1153	0/0:6,0:6:12.04:0,12,223	0/0:21,0:14:8.98:0,9,87	0/0:26,0:21:8.93:0,9,74	0/0:8,0:8:6.02:0,6,109	0/0:23,0:23:28.76:0,29,397	0/0:22,0:22:17.73:0,18,271	1/1:19,0:18:8.83:62,9,0	0/0:15,0:14:18.02:0,18,283	1/1:8,0:22:38.94:367,39,0	1/1:8,0:13:12.40:95,12,0	1/1:13,9:23:21.05:757,21,0	1/1:10,5:16:15.05:611,15,0	1/1:13,5:19:12.04:476,12,0	0/0:32,0:32:54.14:0,54,1258	0/0:17,0:17:27.08:0,27,614	0/1:32,0:32:82.06:82,0,899	1/1:12,0:28:41.91:351,42,0	0/1:14,0:14:14.97:15,0,99	0/0:7,0:7:9.03:0,9,162	0/1:30,0:30:0.06:0,0,265	1/1:11,0:13:2.04:6,2,0	1/1:3,5:8:9.03:363,9,0	1/1:17,13:35:17.98:628,18,0	0/1:6,0:15:47.63:190,0,48	1/1:7,0:22:43.96:409,44,0	0/0:25,0:25:24.06:0,24,401	0/0:10,0:10:15.05:0,15,271
chr10_random	565814	.	GGC	G	371.51	PASS	AC=16;AF=1.000;AN=16;DP=110;FS=0.000;HRun=0;HaplotypeScore=9.0301;MQ=13.43;MQ0=61;QD=8.64;VQSLOD=2.7132;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	1/1:6,1:1:3.01:44,3,0	./.	./.	./.	./.	./.	./.	./.	1/1:1,1:1:3.01:44,3,0	1/1:4,2:1:3.01:44,3,0	./.	./.	./.	1/1:2,4:4:9.03:132,9,0	./.	1/1:1,3:1:3.01:44,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:5,3:4:3.01:44,3,0	1/1:2,4:2:3.01:44,3,0	1/1:2,2:2:3.01:44,3,0
chr10_random	566351	.	G	GTTT	5258.15	PASS	AB=0.537;AC=41;AF=0.732;AN=56;BaseQRankSum=3.133;DP=535;FS=0.570;HRun=7;HaplotypeScore=128.3782;InbreedingCoeff=0.6144;MQ=56.89;MQ0=2;MQRankSum=2.821;QD=11.84;ReadPosRankSum=3.856;VQSLOD=1.0114;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	0/1:4,0:31:17.93:59,0,18	0/1:2,0:9:5.04:5,0,5	0/0:21,0:18:39.10:0,39,512	0/0:12,0:12:24.03:0,24,266	1/1:4,0:31:32.12:102,32,0	0/0:33,0:33:78.19:0,78,1028	0/0:9,0:9:24.07:0,24,328	1/1:8,0:27:25.63:77,26,0	0/0:16,0:16:45.14:0,45,606	1/1:3,0:25:23.67:54,24,0	1/1:0,0:23:24.17:71,24,0	1/1:3,13:16:30.10:619,30,0	1/1:4,8:12:27.05:517,27,0	1/1:2,19:23:54.19:1112,54,0	1/1:1,0:15:14.95:34,15,0	1/1:0,0:11:11.21:25,11,0	0/1:3,0:11:7.84:8,0,8	1/1:2,0:13:7.46:19,7,0	1/1:1,0:11:17.35:62,17,0	0/1:0,0:19:2.37:5,0,2	1/1:1,0:14:14.95:33,15,0	1/1:2,16:17:39.13:803,39,0	1/1:0,22:23:51.15:1014,51,0	1/1:1,9:10:21.07:434,21,0	1/1:1,0:13:11.21:25,11,0	1/1:1,0:19:23.93:59,24,0	1/1:5,0:32:29.54:66,30,0	0/1:1,0:29:14.46:53,0,14
chr10_random	647113	.	AAAATAAATAAAT	A	450.41	PASS	AC=8;AF=0.222;AN=36;BaseQRankSum=3.413;DP=221;FS=13.502;HRun=0;HaplotypeScore=30.6148;InbreedingCoeff=0.5680;MQ=31.40;MQ0=75;MQRankSum=-3.652;QD=12.51;ReadPosRankSum=1.193;VQSLOD=-0.2874;culprit=QD;set=inputR	GT:AD:DP:GQ:PL	0/0:13,0:12:27.96:0,28,1272	./.	./.	./.	0/0:5,0:1:3.01:0,3,154	1/1:3,6:9:9.03:252,9,0	./.	0/0:20,0:11:14.95:0,15,160	0/0:6,0:4:12.04:0,12,576	./.	./.	./.	0/0:4,0:2:6.02:0,6,350	0/0:5,0:3:3.01:0,3,175	0/0:5,0:3:6.02:0,6,348	1/1:5,4:5:3.01:89,3,0	1/1:9,8:12:6.02:207,6,0	./.	0/0:12,0:4:9.02:0,9,375	0/0:6,0:4:3:0,3,27	0/0:4,0:3:9.03:0,9,380	./.	./.	1/1:1,0:1:2.94:18,3,0	0/0:12,0:9:9.03:0,9,475	0/0:7,0:4:12.04:0,12,696	0/0:12,0:9:15.05:0,15,711	0/0:19,0:18:21.07:0,21,1213
chr10_random	647794	.	TC	T	6349.56	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=2.843;DP=654;FS=1.100;HRun=4;HaplotypeScore=85.3121;InbreedingCoeff=0.9940;MQ=56.78;MQ0=9;MQRankSum=-0.492;QD=26.13;ReadPosRankSum=0.176;VQSLOD=3.6210;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	0/0:43,0:43:96.31:0,96,1327	0/0:11,0:10:24.08:0,24,336	0/0:22,0:14:39.13:0,39,535	0/0:27,0:14:41.68:0,42,492	0/0:23,0:23:51.13:0,51,690	0/0:21,0:21:48.16:0,48,668	0/0:12,0:12:30.10:0,30,420	0/0:31,0:28:84.27:0,84,1160	1/1:1,21:22:48.15:575,48,0	1/1:2,25:26:72.22:863,72,0	1/1:0,18:18:45.14:540,45,0	0/0:26,0:26:57.19:0,57,797	0/0:23,0:23:57.15:0,57,775	0/0:41,0:40:90.26:0,90,1228	1/1:1,43:44:99:1248,105,0	0/0:21,0:21:42.14:0,42,588	0/0:29,0:29:69.23:0,69,966	0/0:20,0:20:48.16:0,48,672	1/1:3,20:19:57.17:683,57,0	1/1:0,30:30:24.06:288,24,0	1/1:0,20:20:51.16:612,51,0	0/0:23,0:23:51.17:0,51,705	0/0:23,0:23:54.15:0,54,732	0/0:15,0:14:36.12:0,36,504	1/1:1,13:13:24.07:288,24,0	1/1:1,20:21:21.18:678,21,0	1/1:0,20:20:36.11:432,36,0	1/1:0,4:4:12.04:144,12,0
chr10_random	648071	.	CT	C	1000.40	PASS	AB=0.727;AC=25;AF=0.446;AN=56;BaseQRankSum=-4.605;DP=516;FS=9.827;HRun=16;HaplotypeScore=69.4258;InbreedingCoeff=0.6699;MQ=50.38;MQ0=15;MQRankSum=1.865;QD=4.10;ReadPosRankSum=3.874;VQSLOD=0.3638;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	0/0:32,3:33:21.34:0,21,293	1/1:8,3:9:2.38:17,2,0	0/0:11,0:4:0.31:0,0,17	0/0:14,1:11:5.32:0,5,28	0/0:20,4:24:2.47:0,2,206	0/0:7,0:15:16.17:0,16,72	0/0:9,0:12:14.42:0,14,83	1/1:24,8:27:2.28:111,2,0	1/1:6,15:20:1.51:89,2,0	1/1:10,7:15:8.82:56,9,0	1/1:7,10:16:14.59:90,15,0	0/0:9,0:11:6.80:0,7,41	0/0:18,0:14:20.81:0,21,160	0/0:18,3:19:17.13:0,17,153	1/1:6,10:15:8.26:53,8,0	0/0:14,0:18:26.17:0,26,139	0/0:11,0:17:14.69:0,15,107	0/0:14,0:12:1.63:0,2,29	1/1:10,6:16:20.03:125,20,0	1/1:12,7:18:14.35:82,14,0	1/1:3,7:13:8.80:92,9,0	0/0:16,0:13:12.38:0,12,66	0/0:9,0:11:15.20:0,15,77	0/0:11,0:12:3.78:0,4,48	1/1:6,5:14:6.68:101,7,0	0/1:15,8:22:3.06:90,0,3	1/1:7,1:20:26.21:94,26,0	1/1:3,14:17:33.49:191,33,0
chr10_random	648072	.	TT	T	1015.07	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=-1.109;DP=526;FS=3.279;HRun=15;HaplotypeScore=56.1971;InbreedingCoeff=0.6792;MQ=49.84;MQ0=17;MQRankSum=1.550;QD=4.04;ReadPosRankSum=4.290;VQSLOD=0.4491;culprit=HaplotypeScore;set=inputR	GT:AD:DP:GQ:PL	0/0:37,0:34:21.34:0,21,293	1/1:11,0:9:2.38:17,2,0	0/0:11,0:4:0.31:0,0,17	0/0:15,0:11:5.32:0,5,28	0/0:24,0:23:2.47:0,2,206	0/0:15,0:15:21.23:0,21,120	0/0:12,0:12:14.42:0,14,83	1/1:33,0:26:2.28:111,2,0	1/1:23,0:21:1.51:89,2,0	1/1:18,0:15:8.82:56,9,0	1/1:18,0:17:14.59:90,15,0	0/0:12,0:10:8.90:0,9,61	0/0:20,0:16:20.81:0,21,160	0/0:23,0:21:17.13:0,17,153	1/1:17,0:16:8.26:53,8,0	0/0:21,0:18:30.31:0,30,174	0/0:20,0:17:14.69:0,15,107	0/0:16,0:12:1.63:0,2,29	1/1:18,0:18:22.91:140,23,0	1/1:8,12:18:14.35:82,14,0	1/1:14,0:13:8.80:92,9,0	0/0:20,0:13:18.66:0,19,104	0/0:15,0:11:17.27:0,17,95	0/0:14,0:12:3.78:0,4,48	1/1:13,0:13:6.68:101,7,0	0/1:23,0:21:3.06:90,0,3	1/1:22,0:21:26.18:94,26,0	1/1:21,0:17:33.49:191,33,0
chr10_random	648594	.	G	GA	1864.48	PASS	AB=0.526;AC=17;AF=0.315;AN=54;BaseQRankSum=-7.619;DP=685;FS=18.103;HRun=7;HaplotypeScore=40.9144;InbreedingCoeff=0.8301;MQ=44.15;MQ0=6;MQRankSum=3.303;QD=8.79;ReadPosRankSum=0.904;VQSLOD=0.1340;culprit=HaplotypeScore;set=inputR	GT:AD:DP:GQ:PL	0/0:52,0:51:57.09:0,57,550	0/0:12,0:12:6:0,6,58	0/0:16,0:1:3:0,3,29	./.	0/0:31,0:30:54.04:0,54,521	1/1:1,25:26:21.06:254,21,0	1/1:3,25:26:24.07:290,24,0	0/0:22,0:21:51.06:0,51,485	0/0:15,0:15:9.01:0,9,87	0/0:25,0:23:57.09:0,57,550	0/0:16,0:15:6.01:0,6,58	0/1:2,18:20:7.92:196,0,8	0/0:18,0:18:18.01:0,18,174	0/0:24,0:24:36.05:0,36,342	0/0:27,0:27:18.03:0,18,174	1/1:6,27:32:23.86:273,24,0	1/1:3,24:27:15.05:181,15,0	1/1:1,15:16:12.04:145,12,0	0/0:23,0:23:69.11:0,69,666	0/0:24,0:22:24.03:0,24,231	0/0:30,0:30:20.91:0,21,203	1/1:0,21:15:9.03:109,9,0	1/1:2,20:22:15.04:178,15,0	1/1:2,17:19:36.11:435,36,0	0/0:27,0:27:15.02:0,15,145	0/0:36,0:36:99:0,105,1008	0/0:34,0:34:29.99:0,30,290	0/0:19,0:18:33.05:0,33,319
chr10_random	650544	.	C	CA	264.16	PASS	AB=0.958;AC=7;AF=0.125;AN=56;BaseQRankSum=-3.487;DP=371;FS=17.707;HRun=13;HaplotypeScore=46.9997;InbreedingCoeff=0.3366;MQ=53.42;MQ0=47;MQRankSum=1.223;QD=5.18;ReadPosRankSum=-5.199;VQSLOD=-0.7488;culprit=ReadPosRankSum;set=inputR	GT:AD:DP:GQ:PL	0/0:28,1:30:25.29:0,25,296	1/1:5,2:4:8.94:68,9,0	0/0:12,0:4:8.35:0,8,46	0/0:15,0:8:9.72:0,10,61	0/0:8,0:8:13.94:0,14,88	0/0:14,0:11:10.82:0,11,67	0/0:13,0:14:31.49:0,31,202	1/1:7,13:19:3.63:277,4,0	0/0:7,0:6:14.86:0,15,103	0/0:10,0:9:20.78:0,21,144	0/0:4,0:4:10.96:0,11,68	0/1:9,0:8:19.32:19,0,29	0/1:6,1:4:15.93:16,0,50	0/0:14,0:13:19.82:0,20,129	0/0:15,0:13:29.64:0,30,202	0/0:6,0:4:8.92:0,9,62	0/0:24,0:24:46.54:0,47,314	0/0:20,0:18:37.63:0,38,249	0/0:15,0:13:26.73:0,27,183	0/0:16,0:10:13.94:0,14,88	0/0:14,0:13:23.61:0,24,160	0/0:6,0:4:5.94:0,6,41	0/1:6,0:7:6.27:6,0,47	0/0:19,0:17:35.18:0,35,233	0/0:7,0:6:8.82:0,9,59	0/0:15,0:16:33.70:0,34,217	0/0:16,0:13:17.62:0,18,119	0/0:4,0:5:7.94:0,8,47
chr10_random	650587	.	T	TC	2205.32	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=8.623;DP=249;FS=10.744;HRun=0;HaplotypeScore=30.9242;InbreedingCoeff=0.8633;MQ=57.08;MQ0=5;MQRankSum=-0.985;QD=25.06;ReadPosRankSum=0.482;VQSLOD=3.7564;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	0/0:25,0:25:75.25:0,75,1048	1/1:0,3:3:9.03:121,9,0	0/0:8,0:8:21.06:0,21,280	0/0:11,0:10:19.80:0,20,361	0/0:10,0:10:24.08:0,24,335	1/1:1,8:8:18.06:236,18,0	1/1:0,5:3:3.01:38,3,0	1/1:1,3:4:8.99:114,9,0	0/0:5,0:4:12.04:0,12,167	0/0:9,0:9:27.09:0,27,377	0/0:4,0:4:12.04:0,12,161	1/1:1,7:8:18.06:230,18,0	0/0:8,0:8:21.03:0,21,271	0/0:9,0:9:27.09:0,27,374	0/0:12,0:12:36.12:0,36,503	1/1:0,2:2:6.02:84,6,0	1/1:2,19:19:36.12:504,36,0	1/1:0,22:21:54.17:724,54,0	0/0:6,1:6:18.06:0,18,252	0/0:2,0:2:6.02:0,6,84	0/0:12,0:12:33.11:0,33,454	./.	1/1:1,2:3:3.01:38,3,0	1/1:0,11:10:24.08:315,24,0	0/0:7,0:7:21.07:0,21,288	0/0:17,0:17:48.16:0,48,670	0/0:13,0:12:30.10:0,30,415	0/0:2,0:2:6.02:0,6,84
chr10_random	657052	.	TTCCTTAATA	T	811.77	PASS	AB=0.921;AC=11;AF=0.204;AN=54;BaseQRankSum=3.436;DP=752;FS=1.827;HRun=0;HaplotypeScore=162.9934;InbreedingCoeff=-0.2675;MQ=43.34;MQ0=32;MQRankSum=-6.555;QD=2.76;ReadPosRankSum=-3.366;VQSLOD=1.3882;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	0/0:39,6:37:54.19:0,54,2507	0/1:7,0:7:26.34:26,0,429	0/0:21,0:4:9.50:0,9,150	0/0:13,0:1:3.01:0,3,103	0/0:33,0:31:69.24:0,69,2902	0/1:22,0:20:15.42:15,0,1373	0/1:13,6:15:99:348,0,347	./.	0/0:32,4:33:69.24:0,69,3073	0/1:29,2:27:77.90:78,0,3103	0/1:26,2:26:38.82:39,0,2165	0/1:22,2:19:44.94:45,0,1914	0/0:26,6:22:42.14:0,42,1764	0/0:23,7:22:24.08:0,24,1083	0/0:20,0:17:33.01:0,33,1524	0/0:15,0:14:27.09:0,27,1321	0/1:34,4:35:41.88:42,0,2211	0/0:28,2:27:30.10:0,30,1314	0/1:12,3:11:59.96:60,0,1303	0/1:41,3:41:99:236,0,4288	0/1:31,4:32:8.56:9,0,3803	0/0:23,3:20:45.12:0,45,1761	0/0:32,6:35:69.24:0,69,2816	0/0:24,5:26:42.13:0,42,1824	0/0:21,0:19:36.12:0,36,1707	0/1:31,0:25:58.53:59,0,2843	0/0:40,0:36:78.27:0,78,3434	0/0:20,0:16:9.26:0,9,1354
chr10_random	668832	.	T	TC	81.96	PASS	AB=1.000;AC=11;AF=0.786;AN=14;BaseQRankSum=0.742;DP=210;FS=8.451;HRun=0;HaplotypeScore=9.3667;MQ=14.12;MQ0=159;MQRankSum=0.742;QD=1.46;ReadPosRankSum=0.742;VQSLOD=-0.6040;culprit=QD;set=inputR	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/1:3,0:2:0:0,0,0	1/1:4,2:2:3:28,3,0	1/1:6,2:2:6.01:55,6,0	0/1:9,0:4:11.12:17,0,11	1/1:6,0:1:3:26,3,0	./.	./.	./.	./.	./.	0/1:20,0:10:0:0,0,0	./.	./.	1/1:3,1:1:3:27,3,0	./.
chr10_random	669904	.	T	TC	2467.53	PASS	AB=1.000;AC=31;AF=0.705;AN=44;BaseQRankSum=-2.525;DP=307;FS=19.530;HRun=0;HaplotypeScore=33.6312;InbreedingCoeff=0.6452;MQ=39.65;MQ0=69;MQRankSum=-1.359;QD=11.58;ReadPosRankSum=0.627;VQSLOD=1.6859;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	0/0:16,0:3:0:0,0,0	./.	0/0:16,0:5:14.72:0,15,135	0/0:12,0:2:3.40:0,3,18	0/0:2,0:5:8.95:0,9,66	1/1:1,14:14:15.04:170,15,0	1/1:2,15:15:9.03:115,9,0	0/0:4,0:6:17.98:0,18,153	1/1:3,13:13:21.07:265,21,0	1/1:2,13:10:27.09:353,27,0	1/1:1,7:6:6.02:75,6,0	1/1:1,19:16:20.78:247,21,0	0/1:3,0:2:0:0,0,0	1/1:1,14:14:9.03:111,9,0	1/1:3,10:9:2.81:38,3,0	1/1:1,6:6:6.02:76,6,0	0/0:3,0:5:2.22:0,2,7	1/1:6,13:14:23.91:263,24,0	1/1:4,9:9:27.09:352,27,0	./.	1/1:4,21:21:14.99:192,15,0	./.	./.	./.	./.	1/1:4,9:9:21.07:274,21,0	1/1:4,7:7:3.01:36,3,0	1/1:1,2:2:3.01:39,3,0
chr10_random	670240	.	TG	T	68.93	PASS	AC=2;AF=0.50;AN=4;BaseQRankSum=-1.300;DP=10;FS=0.000;HRun=2;HaplotypeScore=51.9135;MQ=155.56;MQ0=0;MQRankSum=0.550;QD=11.49;ReadPosRankSum=0.550;VQSLOD=1.7252;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	./.	./.	1/1:2,4:6:12.03:137,12,0	0/0:4,0:4:8.45:0,8,70	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10_random	685741	.	G	GCTTAA	1939.24	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.250;DP=672;FS=0.805;HRun=0;HaplotypeScore=118.1670;InbreedingCoeff=0.9997;MQ=87.64;MQ0=0;MQRankSum=-5.052;QD=71.82;ReadPosRankSum=1.800;VQSLOD=4.9350;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	1/1:2,24:27:66.23:2034,66,0	0/0:11,0:11:33.11:0,33,686	0/0:26,0:26:69.20:0,69,1290	0/0:20,0:20:57.16:0,57,1123	0/0:36,0:36:99:0,102,2068	0/0:33,0:33:99:0,99,1981	0/0:18,0:18:54.19:0,54,1126	0/0:39,0:39:99:0,108,2080	0/0:23,0:23:69.24:0,69,1423	0/0:33,0:33:99:0,99,2043	0/0:27,0:27:78.27:0,78,1629	0/0:18,0:18:51.16:0,51,1066	0/0:21,0:21:63.16:0,63,1153	0/0:22,0:22:66.21:0,66,1328	0/0:23,0:23:69.21:0,69,1401	0/0:19,0:19:57.18:0,57,1181	0/0:28,0:28:81.28:0,81,1718	0/0:21,0:21:60.18:0,60,1217	0/0:24,0:24:63.21:0,63,1294	0/0:28,0:28:81.28:0,81,1685	0/0:27,0:27:72.25:0,72,1543	0/0:27,0:27:75.26:0,75,1560	0/0:24,0:24:69.24:0,69,1440	0/0:19,0:19:57.20:0,57,1187	0/0:18,0:18:54.17:0,54,1117	0/0:26,0:26:78.25:0,78,1600	0/0:19,0:19:57.17:0,57,1125	0/0:15,0:15:45.15:0,45,977
chr10_random	688913	.	C	CAT	6645.46	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=-13.810;DP=704;FS=3.807;HRun=0;HaplotypeScore=76.4339;InbreedingCoeff=0.8222;MQ=65.37;MQ0=1;MQRankSum=1.437;QD=35.73;ReadPosRankSum=4.219;VQSLOD=7.2578;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	1/1:3,45:49:99:1852,99,0	0/0:12,0:12:36.12:0,36,527	0/1:8,0:6:9.60:10,0,69	0/1:6,0:5:12.97:13,0,37	0/0:30,0:30:90.29:0,90,1299	0/0:21,0:21:60.19:0,60,862	0/0:26,0:26:75.24:0,75,1081	0/0:38,0:38:99:0,105,1422	0/0:23,0:23:66.19:0,66,930	0/0:31,0:31:87.24:0,87,1199	0/0:16,0:16:45.15:0,45,658	1/1:1,20:20:45.15:842,45,0	1/1:1,27:30:53.86:1010,54,0	0/0:36,0:36:99:0,102,1440	0/0:22,0:22:63.21:0,63,925	0/0:35,0:35:96.29:0,96,1373	0/0:29,0:29:81.23:0,81,1138	0/0:22,0:22:63.04:0,63,895	0/0:21,0:21:60.19:0,60,845	0/0:32,0:32:93.30:0,93,1342	0/0:21,0:21:63.20:0,63,903	1/1:2,16:18:36.12:674,36,0	1/1:0,20:21:51.17:954,51,0	1/1:2,31:33:69.24:1290,69,0	0/0:32,0:32:96.27:0,96,1332	0/0:30,0:30:84.26:0,84,1181	0/0:29,0:29:87.28:0,87,1258	0/0:12,0:12:36.10:0,36,509
chr10_random	689687	.	T	TACACACACACACACAC	6076.86	PASS	AC=16;AF=0.308;AN=52;BaseQRankSum=6.250;DP=798;FS=13.441;HRun=0;HaplotypeScore=349.3199;InbreedingCoeff=0.8559;MQ=56.33;MQ0=4;MQRankSum=-8.489;QD=27.01;ReadPosRankSum=-5.754;VQSLOD=1.7439;culprit=QD;set=inputR	GT:AD:DP:GQ:PL	1/1:36,3:42:2.46:172,2,0	0/0:2,0:2:3.01:0,3,133	0/0:29,0:18:20.32:0,20,478	0/0:30,0:23:32.54:0,33,880	0/0:13,0:14:36.10:0,36,1216	0/0:21,0:21:37.60:0,38,1469	0/0:27,0:27:51.16:0,51,1770	0/0:39,0:39:65.20:0,65,2201	0/0:38,0:38:72.22:0,72,2676	1/1:38,0:38:51.13:2017,51,0	./.	1/1:28,4:34:19.42:1105,19,0	1/1:32,1:35:38.83:1578,39,0	0/0:33,0:35:78.12:0,78,2828	0/0:42,0:45:83.43:0,83,3231	0/0:41,0:43:68.13:0,68,3379	1/1:18,0:21:18.06:782,18,0	0/0:19,0:19:42.14:0,42,1651	0/0:17,0:18:38.98:0,39,1234	0/0:11,0:11:18.06:0,18,703	0/0:68,0:71:99:0,126,4226	./.	1/1:13,0:12:3.01:118,3,0	1/1:20,4:24:4.71:231,5,0	1/1:17,0:17:5.63:73,6,0	0/0:39,0:39:82.72:0,83,3014	0/0:37,0:37:87.28:0,87,3599	0/0:18,0:18:42.14:0,42,1772
chr10_random	690122	.	GCCCCCCCCA	G	5109.67	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.056;DP=453;FS=7.978;HRun=0;HaplotypeScore=135.9464;InbreedingCoeff=0.9651;MQ=76.39;MQ0=0;MQRankSum=-11.775;QD=49.61;ReadPosRankSum=3.469;VQSLOD=4.3391;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	1/1:6,30:36:56.34:1633,56,0	0/0:3,0:3:9.03:0,9,351	0/0:15,0:15:45.15:0,45,1642	0/0:14,0:15:30.98:0,31,1104	0/0:13,0:13:36.12:0,36,1565	0/0:15,0:15:45.15:0,45,2049	0/0:12,0:12:27.07:0,27,1134	0/0:11,0:11:30.06:0,30,1094	0/0:19,0:19:54.19:0,54,2488	0/0:4,0:15:33.10:0,33,1091	0/0:2,0:9:24.08:0,24,894	1/1:5,16:21:45.15:1291,45,0	1/1:2,9:11:24.07:689,24,0	0/0:30,0:30:78.27:0,78,3594	0/0:22,0:22:60.21:0,60,2717	0/0:13,0:13:39.13:0,39,1865	0/0:4,0:27:69.23:0,69,2704	0/0:26,0:25:75.26:0,75,3430	0/0:4,0:4:12.04:0,12,559	0/0:5,0:5:15.05:0,15,636	0/0:42,0:42:99:0,117,5245	1/1:1,6:7:12.04:294,12,0	1/1:1,10:11:27.09:775,27,0	1/1:5,12:17:13.55:427,14,0	0/0:3,0:14:33.11:0,33,1309	0/0:13,0:13:39.13:0,39,1778	0/0:20,0:20:48.16:0,48,2161	0/0:7,0:7:18.06:0,18,777
chr10_random	690815	.	GTCTCTGTC	G	936.85	PASS	AB=0.933;AC=9;AF=0.167;AN=54;BaseQRankSum=3.938;DP=626;FS=2.143;HRun=0;HaplotypeScore=165.5112;InbreedingCoeff=0.6642;MQ=77.79;MQ0=11;MQRankSum=-2.904;QD=12.83;ReadPosRankSum=1.088;VQSLOD=2.9524;culprit=QD;set=inputR	GT:AD:DP:GQ:PL	0/0:22,0:22:12.03:0,12,228	0/0:2,0:2:3.01:0,3,117	./.	0/0:48,0:36:3.02:0,3,23	0/0:12,0:12:18.04:0,18,498	0/0:21,0:21:42.14:0,42,1328	0/0:27,0:27:28.04:0,28,996	0/0:36,0:36:33.11:0,33,626	0/0:18,0:18:30.10:0,30,1002	1/1:10,11:21:30.08:578,30,0	1/1:12,0:12:9.03:214,9,0	0/0:17,0:16:12.47:0,12,144	0/0:20,0:21:32.65:0,33,352	0/0:14,0:14:21.07:0,21,832	0/0:35,0:34:60.21:0,60,1975	0/0:27,0:27:63.20:0,63,2068	1/1:8,6:14:3.01:75,3,0	0/0:18,0:18:24.08:0,24,805	0/0:32,0:29:30.10:0,30,1107	0/0:12,0:12:15.05:0,15,362	0/0:41,0:40:57.67:0,58,1776	0/0:27,0:25:18.04:0,18,322	0/0:17,0:16:9.01:0,9,119	0/0:16,0:15:9.02:0,9,162	1/1:9,3:12:9.03:161,9,0	0/1:13,1:14:54.19:54,0,588	0/0:28,0:28:55.07:0,55,1908	0/0:16,0:16:36.12:0,36,1394
chr10_random	690853	.	G	GTC	554.38	PASS	AB=0.979;AC=17;AF=0.327;AN=52;BaseQRankSum=7.227;DP=638;FS=3.482;HRun=0;HaplotypeScore=135.5258;InbreedingCoeff=0.6741;MQ=44.93;MQ0=38;MQRankSum=-1.195;QD=2.51;ReadPosRankSum=-3.070;VQSLOD=2.0671;culprit=QD;set=inputR	GT:AD:DP:GQ:PL	1/1:26,0:23:3.01:45,3,0	0/0:9,0:9:17.90:0,18,247	./.	./.	0/0:16,0:16:21.54:0,22,289	0/0:25,0:25:53.63:0,54,739	0/0:27,0:26:50.76:0,51,682	0/0:48,0:43:99:0,114,1471	0/0:25,0:24:55.05:0,55,714	0/1:26,0:23:13.59:14,0,273	1/1:16,0:16:5.34:22,5,0	1/1:14,3:14:6.02:90,6,0	1/1:19,4:23:32.57:318,33,0	0/0:12,0:12:18.98:0,19,351	0/0:30,0:30:57.18:0,57,751	0/0:30,0:30:60.05:0,60,1014	0/1:11,0:11:5.54:6,0,18	0/0:20,0:20:24.06:0,24,312	0/0:32,0:29:76.76:0,77,967	0/0:17,0:16:23.77:0,24,267	0/0:38,0:36:70.97:0,71,893	1/1:37,3:37:9.02:123,9,0	1/1:28,0:26:6.02:90,6,0	0/1:14,1:14:0:0,0,0	1/1:18,0:18:2.57:10,3,0	0/0:21,0:20:49.92:0,50,634	0/0:26,0:26:62.79:0,63,765	0/0:16,0:14:39.06:0,39,512
chr10_random	690858	.	TGC	T	929.08	PASS	AB=0.894;AC=19;AF=0.365;AN=52;BaseQRankSum=9.049;DP=620;FS=13.011;HRun=0;HaplotypeScore=123.4320;InbreedingCoeff=0.4555;MQ=44.19;MQ0=40;MQRankSum=-2.261;QD=3.39;ReadPosRankSum=-3.910;VQSLOD=0.5879;culprit=QD;set=inputR	GT:AD:DP:GQ:PL	1/1:19,5:20:3.01:45,3,0	0/0:9,0:9:17.94:0,18,352	./.	./.	0/1:16,0:16:21.28:21,0,358	0/0:23,1:24:53.97:0,54,951	0/0:26,1:26:51.17:0,51,941	0/0:46,0:41:99:0,119,1733	0/0:23,0:22:2.39:0,2,855	0/1:20,6:23:99:307,0,112	1/1:12,5:17:5.98:53,6,0	1/1:11,5:13:6:91,6,0	1/1:16,6:22:32.62:298,33,0	0/0:11,1:12:21.27:0,21,427	0/0:27,1:28:49.38:0,49,988	0/0:30,0:30:19.68:0,20,1337	0/1:9,1:10:16.47:81,0,16	0/0:19,0:19:23.96:0,24,304	0/0:33,0:30:41.24:0,41,1100	0/0:14,1:14:21.42:0,21,330	0/0:36,1:35:52.22:0,52,1092	1/1:32,4:34:8.98:98,9,0	1/1:23,4:25:5.81:89,6,0	0/1:9,4:12:0.11:0,0,0	0/1:12,5:17:0.13:0,0,0	0/1:24,0:23:3.20:3,0,786	0/1:26,0:26:0.61:1,0,881	0/0:16,0:14:39.05:0,39,598
chr10_random	690860	.	CCT	C	65.83	PASS	AB=0.984;AC=17;AF=0.354;AN=48;BaseQRankSum=4.022;DP=632;FS=0.000;HRun=0;HaplotypeScore=127.1574;InbreedingCoeff=0.0460;MQ=43.61;MQ0=45;MQRankSum=-1.124;QD=0.19;ReadPosRankSum=-0.138;VQSLOD=2.1460;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	./.	0/0:9,0:9:14.89:0,15,171	./.	./.	0/0:19,0:19:16.45:0,16,201	0/1:23,0:23:2.33:2,0,312	0/0:28,0:26:29.97:0,30,269	0/0:49,0:44:5.93:0,6,249	0/1:24,0:23:6.09:6,0,387	0/0:28,0:25:21.19:0,21,121	./.	0/0:16,0:13:1.25:0,1,3	1/1:25,0:25:13.93:65,14,0	0/1:12,0:12:5.89:6,0,134	0/0:24,3:28:4.97:0,5,308	0/1:31,0:30:7.60:8,0,495	0/0:8,0:8:0.89:0,1,2	1/1:6,13:19:3.01:34,3,0	0/1:36,0:32:4.15:4,0,316	0/1:15,1:15:15.98:16,0,163	0/0:37,0:34:35.02:0,35,340	0/1:35,0:33:0.03:0,0,0	0/1:27,0:25:0:0,0,0	0/1:11,0:10:0.11:0,0,0	0/1:17,0:17:0:0,0,0	0/1:21,3:23:21.66:22,0,293	0/1:24,1:25:16.19:16,0,331	0/1:17,0:14:9.89:10,0,35
chr10_random	690879	.	CTCTCTCTCTCTCTGTGTGTGTGTGTGTG	C	1520.08	PASS	AB=0.600;AC=7;AF=0.140;AN=50;BaseQRankSum=5.047;DP=636;FS=1.247;HRun=0;HaplotypeScore=340.9304;InbreedingCoeff=0.6072;MQ=44.72;MQ0=32;MQRankSum=-4.698;QD=15.35;ReadPosRankSum=2.403;VQSLOD=1.6675;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	1/1:26,0:21:2.27:56,2,0	0/0:10,0:10:21.54:0,22,2215	./.	./.	0/0:22,0:22:39.12:0,39,3176	0/0:29,0:29:62.93:0,63,4291	0/0:25,0:24:41.02:0,41,2590	0/0:44,0:42:99:0,117,4730	0/0:26,0:25:63.22:0,63,5527	0/0:25,0:22:66.19:0,66,1619	./.	1/1:7,7:11:6.02:328,6,0	0/1:8,16:24:16.10:1112,0,16	0/0:12,0:12:31.05:0,31,2162	0/0:32,0:32:63.22:0,63,4630	0/0:31,0:30:84.29:0,84,6640	0/0:9,0:9:17.68:0,18,147	0/0:21,0:21:27:0,27,1436	0/0:34,0:31:86.93:0,87,4289	0/0:24,0:23:37.47:0,37,3106	0/0:35,0:32:53.33:0,53,3719	1/1:14,21:33:6.01:143,6,0	0/0:9,21:28:1.41:0,1,3	0/0:5,7:11:0.46:0,0,1	0/0:15,0:15:3.48:0,3,156	0/0:25,0:23:68.60:0,69,4702	0/0:32,0:31:80.47:0,80,5337	0/0:14,0:11:30.08:0,30,1537
chr10_random	690881	.	CTCTCTCTCTCTGTGTGTGTGTGTGTG	C	1323.24	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=5.402;DP=640;FS=0.000;HRun=0;HaplotypeScore=316.6555;InbreedingCoeff=0.6566;MQ=44.98;MQ0=28;MQRankSum=-4.751;QD=13.50;ReadPosRankSum=1.807;VQSLOD=1.6538;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	1/1:10,16:21:2.48:92,2,0	0/0:10,0:10:21.54:0,22,2143	0/0:4,0:1:3.01:0,3,57	./.	0/0:22,0:22:36.12:0,36,3022	0/0:28,0:28:59.55:0,60,3930	0/0:25,0:24:41.02:0,41,2426	0/0:44,0:42:99:0,120,4757	0/0:28,0:27:66.23:0,66,5412	0/0:26,0:23:68.17:0,68,1474	./.	1/1:14,0:11:6.02:272,6,0	1/1:23,0:23:1.71:936,2,0	0/0:12,0:12:31.03:0,31,1993	0/0:32,0:32:63.20:0,63,4301	0/0:31,0:30:84.27:0,84,6080	0/0:10,0:10:6.50:0,7,57	0/0:22,0:22:24:0,24,1525	0/0:33,0:30:80.22:0,80,4061	0/0:26,0:25:40.55:0,41,3371	0/0:34,0:31:50.35:0,50,3464	1/1:35,0:33:6.02:143,6,0	0/0:28,0:26:0.94:0,1,2	0/0:12,0:11:0.47:0,0,1	0/0:15,0:15:3.48:0,3,142	0/0:27,0:24:71.04:0,71,4627	0/0:31,0:30:77.47:0,77,4906	0/0:18,0:15:39.11:0,39,2139
chr10_random	690891	.	CTGTGTGTG	C	939.90	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=6.556;DP=620;FS=0.000;HRun=0;HaplotypeScore=157.9463;InbreedingCoeff=0.8057;MQ=46.31;MQ0=19;MQRankSum=-4.713;QD=6.67;ReadPosRankSum=1.439;VQSLOD=2.2153;culprit=QD;set=inputR	GT:AD:DP:GQ:PL	1/1:22,0:19:3:25,3,0	0/0:11,0:11:21.07:0,21,709	0/0:9,0:5:14.41:0,14,321	0/0:10,0:3:9.03:0,9,265	0/0:21,0:21:27.09:0,27,952	0/0:28,0:28:33.11:0,33,1122	0/0:26,0:25:28.04:0,28,877	0/0:46,0:44:72.24:0,72,2012	0/0:28,0:27:60.19:0,60,1976	1/1:17,1:16:20.93:405,21,0	./.	1/1:13,0:11:6.02:123,6,0	1/1:22,0:22:15.05:275,15,0	0/0:13,0:13:24.08:0,24,810	0/0:32,0:32:42.14:0,42,1392	0/0:33,0:32:48.16:0,48,1499	1/1:5,0:6:5.76:127,6,0	0/0:21,0:21:27.09:0,27,885	0/0:32,0:29:45.15:0,45,1416	0/0:25,0:24:35.97:0,36,1191	0/0:34,0:31:33.58:0,34,1210	1/1:32,0:32:3.01:39,3,0	0/0:27,0:25:0:0,0,1	0/1:10,0:9:0.25:0,0,0	1/1:12,0:15:9.03:112,9,0	0/0:26,0:24:48.09:0,48,1278	0/0:29,0:28:49.05:0,49,1563	0/0:13,0:12:27.09:0,27,781
chr10_random	692334	.	GGCAAAGT	G	1646.79	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.891;DP=712;FS=12.208;HRun=0;HaplotypeScore=166.7548;InbreedingCoeff=0.9687;MQ=83.52;MQ0=0;MQRankSum=-8.324;QD=42.23;ReadPosRankSum=-3.097;VQSLOD=2.2809;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	1/1:4,35:39:72.72:1742,73,0	0/0:9,0:9:27.09:0,27,1089	0/0:26,0:26:78.23:0,78,2782	0/0:28,0:28:78.23:0,78,2827	0/0:13,0:13:36.11:0,36,1267	0/0:20,0:20:54.19:0,54,2037	0/0:33,0:33:93.30:0,93,3563	0/0:34,0:34:96.31:0,96,3482	0/0:33,0:33:90.31:0,90,3612	0/0:20,0:20:51.18:0,51,2008	0/0:16,0:16:43.03:0,43,1515	0/0:30,0:30:90.31:0,90,3566	0/0:22,0:22:66.23:0,66,2566	0/0:31,0:31:90.31:0,90,3573	0/0:23,0:23:69.24:0,69,2755	0/0:20,0:20:60.21:0,60,2341	0/0:28,0:28:84.29:0,84,3287	0/0:20,0:20:57.20:0,57,2146	0/0:16,0:16:48.16:0,48,1741	0/0:17,0:17:48.16:0,48,1938	0/0:75,0:75:99:0,226,8688	0/0:26,0:26:78.27:0,78,3079	0/0:13,0:13:30.10:0,30,1122	0/0:43,0:43:99:0,123,4876	0/0:26,0:26:78.27:0,78,3075	0/0:30,0:29:84.28:0,84,3242	0/0:17,0:17:51.16:0,51,1941	0/0:4,0:4:12.04:0,12,485
chr10_random	692948	.	CCACACACA	C	751.47	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.784;DP=522;FS=7.479;HRun=0;HaplotypeScore=123.5671;InbreedingCoeff=0.6735;MQ=62.30;MQ0=10;MQRankSum=-2.461;QD=15.03;ReadPosRankSum=0.312;VQSLOD=2.1299;culprit=QD;set=inputR	GT:AD:DP:GQ:PL	0/0:16,0:30:12.03:0,12,218	0/0:2,0:2:6.02:0,6,246	0/0:28,0:16:9.03:0,9,198	0/0:30,0:14:3.01:0,3,45	0/0:4,0:4:6.02:0,6,190	0/0:12,0:12:18.04:0,18,580	0/0:23,0:29:42.13:0,42,1106	0/0:31,0:29:18.05:0,18,461	0/0:21,0:22:35.87:0,36,1167	1/1:7,10:18:26.02:534,26,0	1/1:4,0:3:2.99:24,3,0	0/0:8,0:18:6.02:0,6,158	0/0:10,0:17:3.01:0,3,104	0/0:24,0:25:31.85:0,32,1095	0/0:23,0:25:39.05:0,39,1410	0/0:21,0:20:42.14:0,42,1411	1/1:14,6:20:8.82:226,9,0	0/0:15,0:21:27.09:0,27,721	0/0:18,0:18:17.49:0,17,473	0/0:10,0:9:15.05:0,15,552	0/0:32,0:37:50.30:0,50,1519	0/0:7,0:12:15.05:0,15,456	0/0:4,0:6:6.02:0,6,152	0/0:16,0:28:12.93:0,13,295	1/1:5,3:8:6.02:104,6,0	0/0:13,0:13:25.64:0,26,601	0/0:20,0:22:48.15:0,48,1347	0/0:6,0:6:12.04:0,12,376
chr10_random	693172	.	TT	T	62.19	PASS	AB=0.948;AC=16;AF=0.286;AN=56;BaseQRankSum=3.414;DP=500;FS=2.047;HRun=17;HaplotypeScore=89.5030;InbreedingCoeff=0.1291;MQ=73.08;MQ0=10;MQRankSum=-1.975;QD=0.36;ReadPosRankSum=2.365;VQSLOD=-0.7506;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	0/1:30,0:30:7.15:7,0,108	0/0:11,0:11:0.40:0,0,54	0/0:38,0:19:2.08:0,2,71	0/0:31,0:18:8.20:0,8,42	0/0:17,0:17:14.85:0,15,133	0/1:21,0:21:40.43:40,0,94	0/0:17,0:17:4.59:0,5,44	0/0:31,0:31:0.82:0,1,84	0/0:13,0:13:11.60:0,12,74	0/0:25,0:25:31.51:0,32,196	0/0:11,0:11:0.17:0,0,68	1/1:4,0:4:6.38:21,6,0	1/1:11,0:11:6.15:18,6,0	0/1:13,0:13:15.44:15,0,29	0/0:18,0:18:8.68:0,9,134	0/0:12,0:12:8.80:0,9,127	0/0:33,0:33:39.27:0,39,366	0/0:25,0:24:14.19:0,14,146	0/0:18,0:18:4.91:0,5,110	0/1:2,5:7:6.58:7,0,35	0/1:11,0:10:14.87:15,0,31	0/1:10,0:10:2.14:6,0,2	1/1:16,0:16:14.98:43,15,0	1/1:9,0:8:1.77:5,2,0	0/0:15,0:15:9.62:0,10,108	0/0:14,0:14:14.72:0,15,98	0/1:15,0:15:0.97:1,0,79	0/1:24,0:22:30.49:30,0,87
chr10_random	693194	.	C	CT	451.06	PASS	AB=0.878;AC=15;AF=0.268;AN=56;BaseQRankSum=3.665;DP=465;FS=0.000;HRun=11;HaplotypeScore=77.3420;InbreedingCoeff=0.3281;MQ=64.97;MQ0=8;MQRankSum=-4.773;QD=2.72;ReadPosRankSum=-0.399;VQSLOD=-0.7488;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	0/1:18,8:27:5.17:124,0,5	0/0:10,0:10:10.89:0,11,91	0/1:32,1:15:27.93:28,0,31	0/0:23,0:12:2.01:0,2,77	0/0:13,0:13:0.62:0,1,56	0/0:22,0:22:35.64:0,36,278	0/0:16,0:17:41.70:0,42,320	0/0:27,0:28:41.21:0,41,319	0/0:11,1:12:11.57:0,12,88	0/0:21,2:24:3.99:0,4,205	0/0:7,0:8:5.93:0,6,46	1/1:6,4:11:12.33:106,12,0	1/1:5,4:9:3.01:30,3,0	0/0:8,0:8:8.89:0,9,69	0/0:16,0:17:16.82:0,17,122	0/1:14,1:16:5.29:5,0,142	0/0:29,0:31:42.47:0,42,321	1/1:14,7:18:23.10:204,23,0	0/0:16,0:16:6.33:0,6,120	0/1:15,1:16:30.95:31,0,136	0/0:7,0:6:5.94:0,6,46	1/1:5,4:10:1.36:3,1,0	0/1:11,4:15:16.75:26,0,17	1/1:4,4:8:6.44:51,6,0	0/0:15,0:15:11.73:0,12,93	0/0:14,0:14:23.54:0,24,185	0/0:11,0:11:7.87:0,8,52	0/0:22,0:20:17.58:0,18,129
chr10_random	697721	.	TA	T	1670.46	PASS	AB=0.828;AC=9;AF=0.161;AN=56;BaseQRankSum=15.056;DP=955;FS=189.954;HRun=1;HaplotypeScore=294.2151;InbreedingCoeff=-0.2042;MQ=58.13;MQ0=2;MQRankSum=-13.293;QD=4.56;ReadPosRankSum=6.529;VQSLOD=-0.0528;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	0/0:31,0:31:84.27:0,84,1317	0/1:13,2:15:32.02:32,0,578	0/0:23,0:23:63.67:0,64,969	0/0:23,0:20:60.20:0,60,929	0/1:43,10:53:99:105,0,1885	0/0:32,2:34:12.76:0,13,1263	0/0:21,0:21:57.19:0,57,911	0/0:55,0:55:99:0,163,2561	0/0:32,0:32:93.32:0,93,1461	0/1:40,9:49:99:202,0,1761	0/1:17,12:29:99:238,0,650	0/0:33,0:33:87.30:0,87,1387	0/0:31,2:33:22.19:0,22,1396	0/0:30,1:31:51.78:0,52,1328	0/0:56,1:57:99:0,124,2499	0/0:47,2:49:70.21:0,70,2120	0/0:14,0:14:29.77:0,30,447	0/0:11,0:11:30.10:0,30,478	0/0:28,1:27:78.24:0,78,1192	0/1:33,20:53:99:606,0,974	0/0:27,0:27:78.27:0,78,1246	0/1:32,10:42:99:258,0,1227	0/0:28,3:31:1.15:0,1,1041	0/0:17,0:17:20.61:0,21,334	0/1:45,12:57:99:291,0,1899	0/1:42,5:46:55.79:56,0,1794	0/0:37,1:38:66.53:0,67,1556	0/1:19,2:21:23.47:23,0,713
chr10_random	697751	.	GTG	G	2013.29	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=15.782;DP=931;FS=12.654;HRun=0;HaplotypeScore=326.6621;InbreedingCoeff=0.5481;MQ=49.74;MQ0=2;MQRankSum=-2.846;QD=5.94;ReadPosRankSum=3.616;VQSLOD=1.3981;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	0/0:28,0:28:29.97:0,30,711	1/1:16,0:16:35.35:208,35,0	0/0:10,0:6:15.03:0,15,169	0/0:17,0:11:30.53:0,31,369	0/0:45,0:45:93.28:0,93,1550	0/0:33,0:33:56.65:0,57,868	0/0:23,0:23:42.10:0,42,639	0/1:49,0:49:99:314,0,254	0/0:39,0:39:69.20:0,69,1113	0/0:45,0:45:99:0,120,1708	0/0:33,0:33:33.09:0,33,514	0/0:40,0:40:57.10:0,57,920	0/0:37,0:37:78.16:0,78,1281	0/0:29,0:29:51.02:0,51,827	0/0:64,0:64:99:0,108,1781	0/0:54,0:54:93.26:0,93,1492	1/1:13,0:13:7.95:43,8,0	0/1:7,0:7:1.31:73,0,1	0/1:26,0:24:49.59:156,0,50	1/1:16,32:47:20.68:141,21,0	1/1:31,0:31:23.03:248,23,0	0/0:37,0:37:63.17:0,63,1003	1/1:26,0:26:25.52:150,26,0	0/1:19,0:19:11.90:30,0,12	0/0:58,0:58:81.17:0,81,1281	0/1:47,0:46:99:348,0,112	0/1:37,0:37:8.05:277,0,8	1/1:20,0:20:15.44:220,15,0
chr10_random	697753	.	GTA	G	6867.51	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=13.453;DP=924;FS=16.628;HRun=0;HaplotypeScore=310.7729;InbreedingCoeff=0.9521;MQ=49.60;MQ0=2;MQRankSum=-3.638;QD=20.56;ReadPosRankSum=-0.036;VQSLOD=3.9882;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	0/0:27,1:28:6.13:0,6,670	1/1:3,13:16:39.11:491,39,0	0/0:10,0:6:6.02:0,6,65	0/0:17,0:11:9.47:0,9,124	0/0:46,0:46:90.29:0,90,1503	0/0:32,0:32:47.75:0,48,808	0/0:23,0:23:42.10:0,42,624	1/1:18,26:44:93.05:1105,93,0	0/0:39,0:39:72.15:0,72,1101	0/0:46,0:46:99:0,99,1514	0/0:32,0:32:45.03:0,45,624	0/0:42,0:42:69.15:0,69,1014	0/0:36,0:36:75.23:0,75,1222	0/0:27,0:27:51.05:0,51,857	0/0:64,0:64:99:0,105,1726	0/0:53,0:53:93.27:0,93,1472	1/1:5,8:13:11.81:139,12,0	1/1:3,4:7:15.05:194,15,0	1/1:12,13:23:57.11:682,57,0	1/1:49,0:48:23.96:296,24,0	1/1:2,29:31:46.16:763,46,0	0/0:37,0:37:60.18:0,60,966	1/1:8,19:27:30.08:374,30,0	1/1:10,9:19:11.69:139,12,0	0/0:58,0:58:69.24:0,69,1166	1/1:15,30:44:96.18:1195,96,0	1/1:10,28:38:69.19:865,69,0	1/1:2,18:20:48.16:624,48,0
chr10_random	697777	.	AGT	A	2325.58	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=7.680;DP=914;FS=11.552;HRun=0;HaplotypeScore=265.5021;InbreedingCoeff=0.8494;MQ=53.75;MQ0=1;MQRankSum=-3.573;QD=15.50;ReadPosRankSum=-5.476;VQSLOD=1.4517;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	0/0:26,0:26:45.15:0,45,740	0/0:14,0:14:30.10:0,30,471	0/1:24,0:14:24.79:25,0,320	0/0:13,0:8:15.44:0,15,209	0/0:35,0:35:93.31:0,93,1475	0/0:39,1:40:71.83:0,72,1183	0/0:24,0:24:33.11:0,33,558	1/1:9,38:47:97.30:1393,97,0	0/0:43,0:43:81.28:0,81,1335	0/0:37,0:37:99:0,105,1697	0/0:25,0:25:53.88:0,54,894	0/0:41,0:41:78.27:0,78,1319	0/0:49,0:49:99:0,102,1656	0/0:31,0:31:15.88:0,16,821	0/0:62,0:62:99:0,103,1927	0/0:54,0:54:99:0,102,1676	1/1:7,9:16:23.75:254,24,0	1/1:2,7:9:18.06:231,18,0	0/0:25,0:24:72.25:0,72,1218	0/0:30,0:29:33.11:0,33,543	0/0:41,0:41:81.18:0,81,1291	0/0:28,0:28:60.14:0,60,934	1/1:7,27:34:42.09:517,42,0	1/1:7,12:19:5:77,5,0	0/0:40,0:40:75.25:0,75,1195	0/0:49,0:48:99:0,141,2271	0/0:38,0:37:87.28:0,87,1432	0/0:19,0:19:48.16:0,48,774
chr10_random	697863	.	GTA	G	718.81	PASS	AB=0.754;AC=5;AF=0.089;AN=56;BaseQRankSum=9.911;DP=949;FS=32.851;HRun=0;HaplotypeScore=224.2020;InbreedingCoeff=-0.0981;MQ=57.60;MQ0=2;MQRankSum=-9.663;QD=4.58;ReadPosRankSum=-5.404;VQSLOD=0.6792;culprit=ReadPosRankSum;set=inputR	GT:AD:DP:GQ:PL	0/0:28,0:28:39.01:0,39,963	0/0:11,0:11:24.08:0,24,415	0/0:39,0:30:57.36:0,57,959	0/0:49,0:39:65.57:0,66,1051	0/0:33,0:33:69.21:0,69,1149	0/0:34,0:34:84.29:0,84,1437	0/0:26,0:26:60.17:0,60,960	0/1:54,15:69:99:399,0,1025	0/0:42,0:42:99:0,111,1877	0/0:42,0:42:99:0,114,1854	0/0:28,0:28:42.13:0,42,692	0/0:39,0:39:99:0,99,1687	0/0:31,0:31:81.26:0,81,1352	0/0:26,0:26:66.23:0,66,1114	0/0:45,0:45:99:0,106,2033	0/0:45,0:45:99:0,117,1986	0/1:12,10:22:99:211,0,231	0/1:7,2:9:47.97:48,0,110	0/0:37,0:37:99:0,99,1616	0/0:31,0:31:42.89:0,43,737	0/0:55,0:55:99:0,153,2532	0/0:25,0:25:39.13:0,39,666	0/1:19,12:30:99:118,0,287	0/1:16,10:25:60.16:60,0,106	0/0:35,0:35:63.22:0,63,1090	0/0:35,0:35:96.20:0,96,1528	0/0:38,0:37:90.29:0,90,1530	0/0:17,0:17:35.94:0,36,738
chr10_random	698069	.	AT	A	2460.46	PASS	AB=0.882;AC=16;AF=0.286;AN=56;BaseQRankSum=1.153;DP=718;FS=2.091;HRun=12;HaplotypeScore=94.3861;InbreedingCoeff=0.8472;MQ=74.33;MQ0=0;MQRankSum=1.341;QD=12.49;ReadPosRankSum=2.031;VQSLOD=3.8358;culprit=HaplotypeScore;set=inputR	GT:AD:DP:GQ:PL	0/0:15,0:36:89.33:0,89,533	1/1:2,10:12:26.89:209,27,0	0/0:16,0:16:14.97:0,15,140	0/0:13,0:12:17.72:0,18,132	0/0:8,0:34:78.13:0,78,419	0/1:16,3:19:15.61:16,0,398	0/0:26,0:26:69.08:0,69,685	0/0:18,0:51:99:0,103,598	0/0:27,0:27:45.97:0,46,641	0/0:32,2:34:35.11:0,35,715	0/0:21,1:22:24.84:0,25,423	0/0:24,0:24:42.99:0,43,606	0/0:14,0:14:24.05:0,24,244	0/0:25,0:25:63.01:0,63,615	0/0:34,4:38:48.25:0,48,835	0/1:24,3:27:3.58:4,0,512	0/0:3,0:22:51.13:0,51,259	0/0:5,0:27:58.35:0,58,307	1/1:6,20:27:58.71:439,59,0	1/1:5,19:24:58.79:447,59,0	1/1:3,9:14:27.97:198,28,0	0/0:19,0:20:39.38:0,39,379	0/0:8,0:30:48.99:0,49,251	0/0:4,0:32:62.66:0,63,332	0/0:27,3:30:39.88:0,40,581	1/1:5,28:33:80.64:622,81,0	1/1:5,20:25:50.79:395,51,0	1/1:1,14:16:43.87:331,44,0
chr10_random	698070	.	TT	T	2461.91	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=1.354;DP=723;FS=1.603;HRun=11;HaplotypeScore=92.9390;InbreedingCoeff=0.8471;MQ=72.68;MQ0=0;MQRankSum=0.557;QD=12.01;ReadPosRankSum=1.829;VQSLOD=3.6556;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	0/0:36,0:36:89.42:0,89,539	1/1:11,0:11:26.89:209,27,0	0/0:15,0:15:14.97:0,15,140	0/0:13,0:12:17.72:0,18,132	0/0:33,0:33:78.13:0,78,419	0/1:20,0:20:15.61:16,0,398	0/0:26,0:26:69.09:0,69,686	0/0:50,0:50:99:0,103,598	0/0:27,0:27:45.97:0,46,641	0/0:33,0:33:35.11:0,35,715	0/0:22,0:22:24.84:0,25,423	0/0:25,0:25:42.99:0,43,606	0/0:15,0:15:24.05:0,24,244	0/0:24,0:24:63.01:0,63,615	0/0:38,0:38:48.25:0,48,835	0/1:27,0:27:3.58:4,0,512	0/0:22,0:22:51.13:0,51,259	0/0:27,0:27:58.35:0,58,307	1/1:28,0:28:31.14:409,31,0	1/1:22,5:27:64.44:479,64,0	1/1:14,0:14:27.97:198,28,0	0/0:22,0:22:39.38:0,39,380	0/0:28,0:28:47.31:0,47,237	0/0:32,0:32:62.66:0,63,332	0/0:30,0:30:39.88:0,40,581	1/1:33,0:33:80.63:622,81,0	1/1:28,0:27:50.75:395,51,0	1/1:17,0:17:43.85:331,44,0
chr10_random	698234	.	C	CCTGAGGCTGAGG	4308.41	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=0.222;DP=709;FS=4.629;HRun=0;HaplotypeScore=249.1237;InbreedingCoeff=0.9543;MQ=69.52;MQ0=0;MQRankSum=-9.294;QD=34.75;ReadPosRankSum=-3.024;VQSLOD=3.7402;culprit=QD;set=inputR	GT:AD:DP:GQ:PL	0/0:47,0:47:75.24:0,75,2315	0/0:10,0:10:24.08:0,24,802	0/0:19,0:19:20.06:0,20,366	0/0:20,0:18:27.04:0,27,559	0/0:32,0:32:48.16:0,48,1531	0/0:15,0:15:15.05:0,15,417	0/0:32,0:32:51.17:0,51,1748	1/1:35,0:35:27.09:1068,27,0	0/0:34,0:34:81.28:0,81,2741	0/0:28,0:28:33.04:0,33,946	0/0:13,0:13:18.06:0,18,539	0/0:32,0:32:75.24:0,75,2396	0/0:23,0:23:51.18:0,51,1592	0/0:24,0:24:60.18:0,60,1976	0/0:34,0:34:87.28:0,87,2756	0/0:23,0:23:60.18:0,60,1901	1/1:23,6:32:27.98:1428,28,0	1/1:9,4:13:18.02:872,18,0	0/0:21,0:21:27.08:0,27,861	0/0:29,0:29:31.39:0,31,949	0/0:54,0:54:90.31:0,90,3028	0/0:15,0:15:18.06:0,18,472	1/1:17,3:22:6.02:237,6,0	1/1:16,3:22:12.04:703,12,0	0/0:21,0:21:33.09:0,33,811	0/0:33,0:33:24.08:0,24,697	0/0:19,0:19:42.14:0,42,1449	0/0:7,0:7:21.07:0,21,731
chr10_random	699643	.	A	ATTTT	12768.20	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-1.450;DP=611;FS=1.520;HRun=9;HaplotypeScore=105.0372;InbreedingCoeff=0.9279;MQ=78.64;MQ0=0;MQRankSum=-7.508;QD=38.23;ReadPosRankSum=-3.322;VQSLOD=3.0982;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	1/1:11,32:47:93.27:1878,93,0	1/1:4,0:6:12.04:229,12,0	0/1:17,0:18:9.48:9,0,317	0/0:15,0:15:17.50:0,18,201	1/1:9,15:26:56.36:1169,56,0	0/0:14,0:14:33.06:0,33,483	0/0:20,0:20:51.12:0,51,724	1/1:11,13:28:48.15:1031,48,0	0/0:22,0:22:63.17:0,63,901	0/0:30,0:30:84.23:0,84,1213	0/0:17,0:17:48.12:0,48,678	0/0:18,0:18:51.17:0,51,746	0/0:27,0:27:75.17:0,75,1055	0/0:31,0:31:69.10:0,69,970	0/0:28,0:28:78.24:0,78,1119	0/0:16,0:17:42.10:0,42,574	1/1:7,13:23:39.13:864,39,0	1/1:1,16:19:51.17:1176,51,0	1/1:9,1:20:42.14:807,42,0	1/1:2,1:23:24.08:504,24,0	1/1:7,1:11:16.08:254,16,0	0/0:18,0:19:57.18:0,57,812	1/1:8,7:17:31.57:608,32,0	1/1:3,24:31:72.20:1575,72,0	0/0:19,0:19:42.10:0,42,614	1/1:10,3:29:68.43:1254,68,0	1/1:13,1:28:51.17:985,51,0	1/1:3,0:8:24.08:424,24,0
chr10_random	700443	.	CCCAGGTT	C	6222.60	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.130;DP=686;FS=0.000;HRun=0;HaplotypeScore=174.1461;InbreedingCoeff=0.9939;MQ=82.23;MQ0=0;MQRankSum=-13.529;QD=71.52;ReadPosRankSum=0.730;VQSLOD=4.9997;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,5951	0/0:8,0:8:24.08:0,24,945	0/0:31,0:31:87.30:0,87,3097	0/0:26,0:26:78.27:0,78,2862	0/0:19,0:19:54.19:0,54,2203	0/0:18,0:18:54.19:0,54,2113	0/0:30,0:30:90.30:0,90,3453	1/1:0,24:24:72.23:1903,72,0	0/0:30,0:30:90.29:0,90,3621	0/0:26,0:26:78.27:0,78,3208	0/0:22,0:22:66.23:0,66,2548	0/0:46,0:46:99:0,138,5577	0/0:17,0:17:51.18:0,51,2138	0/0:38,0:38:99:0,111,4419	0/0:25,0:25:75.26:0,75,3087	0/0:29,0:29:87.30:0,87,3536	1/1:0,14:14:33.11:916,33,0	1/1:0,6:6:15.05:418,15,0	0/0:19,0:19:57.20:0,57,2162	0/0:25,0:25:72.25:0,72,2847	0/0:45,0:45:99:0,135,5278	0/0:22,0:22:66.23:0,66,2704	1/1:0,16:16:48.08:1234,48,0	1/1:0,27:27:65.99:1751,66,0	0/0:24,0:24:72.25:0,72,2928	0/0:31,0:31:93.31:0,93,3568	0/0:14,0:14:39.11:0,39,1558	0/0:6,0:6:18.06:0,18,755
chr10_random	700966	.	ATTAGTTAG	A	2546.66	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.624;DP=751;FS=0.000;HRun=0;HaplotypeScore=182.9051;InbreedingCoeff=0.9085;MQ=59.19;MQ0=0;MQRankSum=-2.805;QD=21.58;ReadPosRankSum=-1.985;VQSLOD=2.9163;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	0/0:11,0:31:44.95:0,45,1046	0/0:14,0:14:33.07:0,33,1025	0/0:8,0:4:9.03:0,9,332	0/0:10,0:7:12.51:0,13,303	0/0:13,0:34:62.83:0,63,1035	0/0:27,0:27:66.23:0,66,2675	0/0:29,0:29:54.14:0,54,1555	1/1:18,16:34:48.08:692,48,0	0/0:36,0:36:90.28:0,90,3172	0/0:37,0:37:81.26:0,81,2782	0/0:28,0:28:60.05:0,60,2123	0/0:25,0:25:51.16:0,51,1960	0/0:33,0:33:75.25:0,75,2612	0/0:30,0:30:69.21:0,69,2210	0/0:36,0:36:87.28:0,87,3212	0/0:32,0:32:72.22:0,72,2435	1/1:7,6:13:6.02:155,6,0	1/1:4,9:13:12.04:268,12,0	0/0:30,0:28:45.13:0,45,1004	0/0:27,0:27:60.19:0,60,2239	0/0:27,0:27:60.17:0,60,2131	0/0:24,0:24:48.14:0,48,1726	1/1:9,24:33:47.74:1078,48,0	1/1:5,20:25:21.07:520,21,0	0/0:25,0:25:45.14:0,45,1483	0/0:42,0:42:93.27:0,93,3164	0/0:38,0:38:87.19:0,87,2515	0/0:10,0:10:3.01:0,3,126
chr10_random	701216	.	T	TC	1568.45	PASS	AB=0.734;AC=22;AF=0.393;AN=56;BaseQRankSum=9.085;DP=490;FS=7.963;HRun=10;HaplotypeScore=78.8893;InbreedingCoeff=0.6125;MQ=80.86;MQ0=0;MQRankSum=0.955;QD=6.79;ReadPosRankSum=0.741;VQSLOD=1.4936;culprit=HaplotypeScore;set=inputR	GT:AD:DP:GQ:PL	0/1:12,8:20:49.05:49,0,54	0/0:9,0:9:11.94:0,12,98	0/0:21,0:22:0.43:0,0,143	0/0:17,0:15:22.27:0,22,159	0/1:8,6:14:18.63:26,0,19	0/0:7,0:7:14.97:0,15,123	0/0:24,0:25:52.96:0,53,424	1/1:10,5:15:6.02:64,6,0	0/0:10,0:10:23.92:0,24,189	0/0:19,0:19:32.92:0,33,268	0/0:14,0:15:31.64:0,32,239	0/0:14,0:15:29.95:0,30,246	0/0:14,0:15:36.99:0,37,275	0/0:21,0:21:42.40:0,42,342	0/0:26,0:26:53.80:0,54,434	0/0:19,0:19:44.88:0,45,363	1/1:6,20:26:19.15:221,19,0	0/1:4,6:10:17.35:54,0,17	1/1:21,0:21:45.36:189,45,0	1/1:20,0:21:46.49:209,46,0	1/1:26,0:26:58.92:243,59,0	0/0:16,0:16:29.78:0,30,231	1/1:1,5:6:9.02:95,9,0	0/1:15,2:17:31.26:96,0,31	0/0:23,0:23:2.69:0,3,172	1/1:19,0:19:37.56:156,38,0	1/1:27,0:27:67.14:280,67,0	1/1:9,0:9:21.55:90,22,0
chr10_random	701217	.	C	CCC	2946.57	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=7.123;DP=487;FS=8.990;HRun=9;HaplotypeScore=83.4242;InbreedingCoeff=0.6535;MQ=80.25;MQ0=0;MQRankSum=0.155;QD=11.83;ReadPosRankSum=0.693;VQSLOD=0.6944;culprit=HaplotypeScore;set=inputR	GT:AD:DP:GQ:PL	0/1:20,0:20:3.61:4,0,77	0/0:9,0:9:11.96:0,12,122	0/1:20,0:20:0.11:0,0,187	0/0:18,0:16:21.86:0,22,203	0/1:14,0:14:3.33:3,0,25	0/0:8,0:8:15.01:0,15,153	0/0:26,0:26:53.82:0,54,530	1/1:16,0:16:4.99:18,5,0	0/0:9,0:9:24.01:0,24,227	0/0:19,0:19:32.95:0,33,329	0/0:14,0:14:32.59:0,33,300	0/0:15,0:15:30.03:0,30,305	0/0:15,0:15:38.45:0,38,344	0/0:22,0:22:42.01:0,42,421	0/0:26,0:26:54.52:0,55,543	0/0:19,0:19:45.01:0,45,444	1/1:22,0:22:17.47:62,17,0	0/1:11,0:11:7.33:7,0,28	1/1:21,0:21:50.83:422,51,0	1/1:1,20:21:51.08:576,51,0	1/1:27,0:27:66.06:615,66,0	0/0:16,0:16:29.93:0,30,280	1/1:6,0:6:7.36:26,7,0	0/1:17,0:17:44.02:51,0,44	0/0:22,0:22:2.41:0,2,203	1/1:18,0:18:41.99:383,42,0	1/1:27,0:27:75.12:746,75,0	1/1:9,0:9:24.03:233,24,0
chr10_random	701218	.	C	CCT	5504.92	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.279;DP=492;FS=32.955;HRun=0;HaplotypeScore=74.3583;InbreedingCoeff=0.9673;MQ=79.27;MQ0=0;MQRankSum=-0.258;QD=42.35;ReadPosRankSum=4.118;VQSLOD=3.5164;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	0/0:20,0:20:29.10:0,29,271	0/0:9,0:9:27.01:0,27,306	0/0:20,0:20:16.14:0,16,464	0/0:17,0:15:32.21:0,32,424	0/0:15,0:15:14.49:0,14,116	0/0:8,0:8:21.04:0,21,278	0/0:25,0:25:60.07:0,60,846	0/0:16,0:16:32.18:0,32,258	0/0:8,0:8:24.08:0,24,364	0/0:19,0:19:51.14:0,51,666	0/0:13,0:13:39.08:0,39,521	0/0:16,0:16:39.10:0,39,536	0/0:15,0:15:45.10:0,45,603	0/0:22,0:22:54.06:0,54,737	0/0:26,0:26:72.66:0,73,982	0/0:20,0:20:48.11:0,48,709	0/0:22,0:22:24.05:0,24,117	0/0:11,0:11:10.09:0,10,105	1/1:3,20:23:62.54:956,63,0	1/1:21,0:21:54.11:861,54,0	1/1:2,26:28:66.21:1140,66,0	0/0:15,0:15:44.77:0,45,557	0/0:5,0:5:7.79:0,8,30	0/0:17,0:17:40.80:0,41,358	0/0:23,0:23:53.17:0,53,598	1/1:3,18:21:54.11:824,54,0	1/1:0,27:27:78.22:1312,78,0	1/1:0,10:10:24.08:412,24,0
chr10_random	701645	.	CCA	C	4937.98	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=8.218;DP=573;FS=2.147;HRun=0;HaplotypeScore=83.6411;InbreedingCoeff=0.6463;MQ=74.26;MQ0=0;MQRankSum=-2.441;QD=23.74;ReadPosRankSum=1.330;VQSLOD=5.3258;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	0/0:28,0:28:81.25:0,81,1353	1/1:6,0:6:5.50:50,6,0	0/0:15,0:15:19.79:0,20,545	0/0:20,0:20:54.15:0,54,877	0/0:17,0:17:48.07:0,48,759	0/0:17,0:17:51.14:0,51,858	0/0:29,0:29:84.25:0,84,1385	1/1:1,24:25:72.15:912,72,0	0/0:15,0:15:45.14:0,45,690	0/0:23,0:23:69.20:0,69,1065	0/0:14,0:14:42.14:0,42,767	0/0:23,0:23:69.20:0,69,1143	0/0:36,0:36:99:0,105,1807	0/0:22,0:22:63.19:0,63,1020	0/0:27,0:27:78.21:0,78,1309	0/0:15,0:15:45.09:0,45,633	1/1:1,20:21:48.16:717,48,0	1/1:0,39:39:99:1521,102,0	0/1:12,0:12:26.44:26,0,95	0/1:14,0:14:17.02:17,0,163	0/1:39,0:39:63.30:63,0,462	0/0:14,0:14:36.07:0,36,566	1/1:1,11:12:27.05:373,27,0	1/1:0,32:32:84.28:1255,84,0	0/0:16,0:16:45.14:0,45,727	0/0:18,0:18:24.36:0,24,341	0/0:16,0:15:44.74:0,45,316	0/1:8,0:8:4.86:5,0,114
chr10_random	701646	.	CA	C	1921.47	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=13.016;DP=572;FS=1.171;HRun=1;HaplotypeScore=82.1941;InbreedingCoeff=0.5855;MQ=73.57;MQ0=0;MQRankSum=-2.195;QD=8.58;ReadPosRankSum=0.924;VQSLOD=1.0309;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	0/0:28,0:28:81.22:0,81,1122	1/1:0,6:6:9.02:105,9,0	0/0:14,0:14:19.78:0,20,440	0/0:20,0:20:54.16:0,54,765	0/0:17,0:17:48.07:0,48,634	0/0:17,0:17:51.14:0,51,702	0/0:29,0:29:87.26:0,87,1192	1/1:24,0:24:67.69:401,68,0	0/0:15,0:15:45.14:0,45,603	0/0:23,0:23:69.20:0,69,910	0/0:14,0:14:42.14:0,42,611	0/0:23,0:23:69.20:0,69,951	0/0:37,0:37:99:0,105,1466	0/0:21,0:21:63.16:0,63,845	0/0:26,0:26:78.20:0,78,1070	0/0:16,0:16:45.10:0,45,566	1/1:20,0:20:46.44:253,46,0	1/1:39,0:39:98.63:536,99,0	0/1:12,0:12:22.64:61,0,23	0/1:13,0:13:21:21,0,50	0/1:40,0:40:99:135,0,128	0/0:16,0:16:39.06:0,39,491	1/1:11,1:12:25.96:142,26,0	1/1:32,0:32:81.27:443,81,0	0/0:16,0:16:45.06:0,45,589	0/1:18,0:18:8.34:8,0,91	0/0:16,0:15:35.63:0,36,132	0/1:8,0:8:7.96:8,0,37
chr10_random	702318	.	TC	T	2594.39	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.577;DP=662;FS=0.000;HRun=4;HaplotypeScore=88.8035;InbreedingCoeff=0.9988;MQ=76.51;MQ0=0;MQRankSum=-7.654;QD=26.75;ReadPosRankSum=-0.320;VQSLOD=2.3073;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,105,1431	0/0:9,0:9:24.05:0,24,315	0/0:21,0:21:54.18:0,54,740	0/0:21,0:21:60.14:0,60,793	0/0:13,0:13:36.12:0,36,502	0/0:11,0:11:33.11:0,33,461	0/0:36,0:36:99:0,108,1489	1/1:0,23:22:66.20:792,66,0	0/0:26,0:26:75.25:0,75,1049	0/0:20,0:20:60.15:0,60,818	0/0:22,0:22:60.18:0,60,804	0/0:19,0:19:54.17:0,54,739	0/0:23,0:23:69.18:0,69,899	0/0:32,0:32:87.28:0,87,1200	0/0:28,0:28:84.28:0,84,1174	0/0:21,0:21:63.20:0,63,865	1/1:1,20:21:51.16:611,51,0	1/1:1,14:15:39.12:468,39,0	0/0:21,1:22:27.18:0,27,783	0/0:31,0:31:87.29:0,87,1218	0/0:55,0:55:99:0,157,2166	0/0:35,0:35:99:0,99,1386	1/1:3,11:14:27.08:323,27,0	1/1:0,24:24:48.15:575,48,0	0/0:25,0:25:75.25:0,75,1050	0/0:28,0:28:81.27:0,81,1133	0/0:18,0:18:51.14:0,51,676	0/0:10,0:10:30.10:0,30,420
chr10_random	702355	.	GAATGGTCTCCTTCCTGATTTTCCTTCAGA	G	5083.70	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.416;DP=606;FS=3.789;HRun=0;HaplotypeScore=432.3536;InbreedingCoeff=0.9227;MQ=85.40;MQ0=0;MQRankSum=-8.218;QD=175.30;ReadPosRankSum=1.705;VQSLOD=4.0880;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,11817	0/0:8,0:8:24.08:0,24,2951	0/0:18,0:18:54.18:0,54,3169	0/0:28,0:28:81.24:0,81,4754	0/0:14,0:14:42.12:0,42,4241	0/0:16,0:16:48.16:0,48,5864	0/0:42,0:42:99:0,126,13904	1/1:1,0:1:3:26,3,0	0/0:21,0:21:60.21:0,60,6895	0/0:25,0:25:75.25:0,75,8422	0/0:16,0:16:48.16:0,48,5931	0/0:27,0:27:81.28:0,81,10067	0/0:22,0:22:66.23:0,66,7848	0/0:17,0:17:51.15:0,51,5789	0/0:33,0:33:99:0,99,12784	0/0:20,0:20:60.21:0,60,7274	1/1:1,10:11:33.11:2411,33,0	1/1:0,7:7:21.07:1576,21,0	0/0:29,0:29:87.27:0,87,6958	0/0:26,0:26:78.27:0,78,9308	0/0:63,0:62:99:0,184,21071	0/0:30,0:30:90.29:0,90,10420	1/1:0,4:5:12.04:681,12,0	1/1:1,3:5:6.02:389,6,0	0/0:27,0:27:81.26:0,81,9043	0/0:27,0:27:81.28:0,81,9151	0/0:19,0:19:57.20:0,57,6726	0/0:15,0:15:45.15:0,45,5558
chr10_random	702419	.	AGTGTGTGTGT	A	503.50	PASS	AC=14;AF=0.280;AN=50;BaseQRankSum=4.354;DP=571;FS=11.492;HRun=0;HaplotypeScore=186.0542;InbreedingCoeff=0.6774;MQ=60.92;MQ0=19;MQRankSum=-3.465;QD=3.38;ReadPosRankSum=-1.447;VQSLOD=1.8696;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	0/0:23,0:25:17.45:0,17,587	./.	./.	./.	0/0:16,0:16:27.08:0,27,781	0/0:27,0:26:39.61:0,40,1620	0/0:35,0:35:29.76:0,30,1085	0/0:23,0:22:3.48:0,3,64	0/0:10,0:17:10.44:0,10,542	0/0:24,0:24:25.90:0,26,814	0/0:13,0:12:8.44:0,8,386	0/0:20,0:19:24.08:0,24,797	0/0:14,0:13:9.03:0,9,307	0/0:14,0:13:18.06:0,18,786	0/0:28,0:26:27.08:0,27,897	0/0:25,0:25:27.08:0,27,1000	0/0:25,0:26:34.50:0,34,1144	1/1:10,0:10:2.70:69,3,0	1/1:17,1:17:3.01:56,3,0	1/1:18,0:18:3.44:21,3,0	1/1:49,0:45:6:75,6,0	0/0:18,0:18:18.05:0,18,677	0/0:10,0:10:3.01:0,3,138	0/0:24,0:23:11.21:0,11,471	0/0:18,0:18:12.04:0,12,434	1/1:16,0:16:2.98:78,3,0	1/1:18,5:23:8.94:265,9,0	1/1:12,3:13:3:88,3,0
chr10_random	702441	.	TGTGTGTGTGT	T	576.74	PASS	AB=1.000;AC=13;AF=0.250;AN=52;BaseQRankSum=3.296;DP=579;FS=8.336;HRun=0;HaplotypeScore=163.6507;InbreedingCoeff=0.7309;MQ=51.11;MQ0=25;MQRankSum=-2.865;QD=3.84;ReadPosRankSum=-2.132;VQSLOD=1.8906;culprit=QD;set=inputR	GT:AD:DP:GQ:PL	0/0:28,0:28:32.25:0,32,942	0/0:5,0:4:3.01:0,3,44	./.	./.	0/0:18,0:18:36.11:0,36,1114	0/0:22,0:21:43.09:0,43,1742	0/0:42,0:41:38.79:0,39,1334	0/0:20,0:18:9.50:0,10,167	0/0:21,0:21:25.49:0,25,1040	0/0:24,0:24:37.30:0,37,1102	0/0:14,0:13:8.44:0,8,386	0/0:16,0:14:27.09:0,27,919	0/0:19,0:18:21.53:0,22,662	0/0:23,0:22:33.11:0,33,1310	0/0:27,0:25:30.07:0,30,1019	0/0:21,0:21:30.09:0,30,1122	0/0:25,0:25:42.89:0,43,1381	1/1:3,0:3:2.70:69,3,0	0/1:10,0:9:0.21:51,0,0	1/1:4,14:18:3.44:21,3,0	1/1:64,0:59:10.35:104,10,0	0/0:22,0:22:24.07:0,24,763	0/0:7,0:7:6.02:0,6,181	0/0:24,0:23:17.23:0,17,622	0/0:20,0:19:21.07:0,21,666	1/1:17,0:17:8.98:134,9,0	1/1:21,0:21:8.94:265,9,0	1/1:17,0:14:3:88,3,0
chr10_random	702818	.	T	TACACA	3929.21	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.761;DP=450;FS=4.638;HRun=0;HaplotypeScore=102.6728;InbreedingCoeff=0.9649;MQ=70.92;MQ0=0;MQRankSum=-8.638;QD=65.49;ReadPosRankSum=-1.937;VQSLOD=4.3167;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	0/0:26,0:26:72.20:0,72,1562	0/0:6,0:6:15.05:0,15,349	0/0:16,0:15:42.53:0,43,868	0/0:24,0:18:50.77:0,51,1126	0/0:13,0:13:39.13:0,39,852	0/0:14,0:14:42.14:0,42,979	0/0:19,0:19:57.20:0,57,1279	1/1:2,22:30:87.21:2432,87,0	0/0:23,0:23:69.17:0,69,1541	0/0:26,0:26:78.27:0,78,1746	0/0:11,0:11:30.10:0,30,626	0/0:13,0:13:39.13:0,39,908	0/0:12,0:12:33.11:0,33,769	0/0:22,0:22:66.23:0,66,1513	0/0:12,0:12:33.11:0,33,749	0/0:15,0:15:45.14:0,45,1003	1/1:2,4:7:12:318,12,0	1/1:0,5:6:12.04:398,12,0	0/0:21,0:21:60.20:0,60,1327	0/0:19,0:19:54.19:0,54,1257	0/0:16,0:15:39.13:0,39,889	0/0:12,0:12:33.11:0,33,751	1/1:2,5:7:15.05:497,15,0	1/1:5,5:9:9.50:284,10,0	0/0:18,0:18:54.19:0,54,1225	0/0:24,0:24:72.25:0,72,1585	0/0:18,0:18:48.15:0,48,1073	0/0:10,0:10:30.10:0,30,643
chr10_random	702888	.	CT	C	423.24	PASS	AB=0.812;AC=6;AF=0.107;AN=56;BaseQRankSum=5.284;DP=444;FS=7.375;HRun=1;HaplotypeScore=122.6515;InbreedingCoeff=-0.0344;MQ=56.74;MQ0=56;MQRankSum=-5.074;QD=4.60;ReadPosRankSum=-1.150;VQSLOD=-0.3072;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	0/0:21,0:18:17:0,17,160	0/1:5,0:4:11.97:12,0,14	0/1:26,0:10:11.31:11,0,68	0/0:45,0:10:5.77:0,6,30	0/0:18,0:17:2.99:0,3,39	0/0:12,0:12:14.50:0,15,87	0/0:25,0:23:38.23:0,38,268	0/1:21,10:28:99:228,0,488	0/0:13,0:11:23.52:0,24,203	0/0:18,0:15:38.26:0,38,327	0/0:10,0:10:14.45:0,14,80	0/0:13,0:13:29.98:0,30,240	0/0:15,0:15:41.56:0,42,322	0/0:20,0:17:31.57:0,32,213	0/0:11,0:10:11.47:0,11,63	0/0:14,0:12:24.07:0,24,160	0/1:5,11:16:99:257,0,115	0/1:4,1:4:26.35:26,0,36	0/0:7,0:6:14.57:0,15,107	0/0:7,0:7:3.01:0,3,36	0/0:11,0:8:5.05:0,5,40	0/0:20,0:18:25.53:0,26,156	0/1:5,4:7:0.12:0,0,0	0/0:6,2:7:1.59:0,2,7	0/0:15,0:12:17.22:0,17,90	0/0:19,0:16:36.82:0,37,299	0/0:20,0:14:22.44:0,22,182	0/0:10,0:3:3.93:0,4,51
chr10_random	702894	.	CT	C	873.75	PASS	AB=0.862;AC=20;AF=0.357;AN=56;BaseQRankSum=5.682;DP=466;FS=8.089;HRun=1;HaplotypeScore=130.7075;InbreedingCoeff=0.3655;MQ=65.87;MQ0=50;MQRankSum=-6.214;QD=4.60;ReadPosRankSum=0.107;VQSLOD=-0.0665;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	0/0:22,1:20:14.15:0,14,131	1/1:0,5:4:8.98:94,9,0	0/1:35,0:18:3.35:3,0,205	0/0:52,0:17:17.55:0,18,123	1/1:10,9:18:1.76:19,2,0	0/0:12,0:12:16.71:0,17,82	0/0:25,0:24:53.58:0,54,300	0/1:31,0:29:41.86:42,0,343	0/0:13,0:12:28.30:0,28,203	0/0:16,0:15:36.84:0,37,217	0/0:13,0:13:19.57:0,20,104	0/0:16,0:16:35.85:0,36,244	0/0:14,0:14:40.54:0,41,284	0/0:20,0:18:20.46:0,20,167	0/0:12,0:12:22.46:0,22,113	0/0:16,0:14:26.14:0,26,119	0/1:16,0:16:75.53:89,0,76	0/1:5,0:4:13.95:14,0,23	1/1:1,5:5:15.04:171,15,0	1/1:0,7:7:3.01:35,3,0	1/1:9,2:8:3.01:36,3,0	0/0:18,0:18:27.78:0,28,129	0/0:10,0:8:2.72:0,3,14	1/1:7,0:7:2.24:14,2,0	0/0:16,0:13:22.39:0,22,106	0/1:5,14:16:62.85:305,0,63	0/1:6,13:11:14.45:157,0,14	1/1:5,4:2:6.02:67,6,0
chr10_random	702899	.	T	TCCCCC	7085.41	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-1.385;DP=510;FS=1.554;HRun=3;HaplotypeScore=163.3601;InbreedingCoeff=-0.0378;MQ=66.31;MQ0=40;MQRankSum=-3.227;QD=13.89;ReadPosRankSum=3.227;VQSLOD=1.4776;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	1/1:24,0:22:9.24:231,9,0	1/1:5,0:4:9.50:222,10,0	0/1:38,0:20:99:163,0,212	0/1:54,0:19:99:109,0,118	1/1:22,0:21:8:134,8,0	1/1:12,0:12:21.28:174,21,0	1/1:26,0:25:46.17:290,46,0	1/1:36,0:35:33.07:653,33,0	1/1:12,0:12:30.82:244,31,0	1/1:21,0:21:39.27:435,39,0	1/1:14,0:14:26.85:242,27,0	1/1:20,0:20:52.72:462,53,0	1/1:16,0:16:30.67:196,31,0	1/1:17,0:17:30.35:261,30,0	1/1:13,0:13:29.50:221,30,0	1/1:18,0:16:36.21:291,36,0	1/1:17,0:17:8.12:217,8,0	1/1:9,0:8:8.92:84,9,0	1/1:6,0:5:15.05:381,15,0	1/1:7,0:7:3.01:74,3,0	1/1:5,8:12:3.01:74,3,0	1/1:18,0:18:34.50:248,34,0	0/1:17,0:15:8.42:8,0,30	1/1:8,0:8:5.49:22,5,0	1/1:17,0:14:20.05:169,20,0	1/1:23,0:21:33.10:974,33,0	1/1:19,0:11:14.17:348,14,0	1/1:6,0:2:6.02:159,6,0
chr10_random	703192	.	G	GTC	239.40	PASS	AB=1.000;AC=15;AF=0.441;AN=34;BaseQRankSum=-2.032;DP=558;FS=0.000;HRun=0;HaplotypeScore=109.7791;InbreedingCoeff=-0.0084;MQ=71.79;MQ0=15;MQRankSum=0.964;QD=1.08;ReadPosRankSum=-0.964;VQSLOD=1.8589;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	0/1:31,0:31:20.52:21,0,34	./.	./.	0/0:49,0:31:0:0,0,0	1/1:17,0:15:2.50:9,2,0	1/1:30,0:30:6.02:80,6,0	1/1:13,1:14:2.99:24,3,0	./.	0/1:11,0:12:0.49:0,0,29	0/1:29,0:29:6.25:23,0,6	./.	1/1:6,5:11:5.05:49,5,0	0/1:14,0:13:22.96:25,0,23	0/1:21,0:21:26.07:37,0,26	0/0:16,0:15:2.72:0,3,31	0/1:26,0:25:46.84:76,0,47	0/0:27,0:27:4.73:0,5,22	./.	0/0:25,0:25:5.68:0,6,28	0/0:17,0:17:0:0,0,0	./.	./.	./.	0/1:16,0:16:0:0,0,0	./.	./.	0/0:17,0:17:2.84:0,3,14	./.
chr10_random	703282	.	AT	A	4476.94	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.739;DP=575;FS=0.805;HRun=1;HaplotypeScore=86.0338;InbreedingCoeff=0.9999;MQ=87.55;MQ0=0;MQRankSum=-2.580;QD=38.93;ReadPosRankSum=1.036;VQSLOD=5.3317;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	0/0:26,0:26:69.24:0,69,1098	0/0:13,0:13:39.12:0,39,596	0/0:29,0:29:63.74:0,64,1246	0/0:19,0:18:44.91:0,45,719	0/0:20,0:20:57.19:0,57,911	0/0:23,0:23:66.23:0,66,1055	0/0:21,0:21:63.21:0,63,1007	1/1:0,35:35:99:1394,102,0	0/0:20,0:20:60.20:0,60,959	0/0:22,0:22:66.22:0,66,1035	0/0:12,0:12:33.10:0,33,505	0/0:15,0:15:42.14:0,42,672	0/0:14,0:14:42.14:0,42,663	0/0:22,0:22:66.23:0,66,1055	0/0:21,0:21:63.21:0,63,1007	0/0:17,0:17:51.16:0,51,792	1/1:0,18:18:54.18:754,54,0	1/1:1,15:16:48.15:652,48,0	0/0:12,0:12:36.11:0,36,553	0/0:23,0:23:69.24:0,69,1102	0/0:19,0:19:54.18:0,54,852	0/0:22,0:22:66.21:0,66,1031	1/1:0,17:17:48.16:671,48,0	1/1:0,29:29:72.24:1006,72,0	0/0:22,0:22:63.21:0,63,1003	0/0:27,0:27:81.27:0,81,1273	0/0:25,0:24:72.25:0,72,1151	0/0:16,0:16:48.16:0,48,763
chr10_random	703560	.	TG	T	3070.62	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.741;DP=697;FS=3.463;HRun=6;HaplotypeScore=82.0670;InbreedingCoeff=0.9974;MQ=84.72;MQ0=0;MQRankSum=-2.909;QD=25.17;ReadPosRankSum=1.801;VQSLOD=3.9566;culprit=HaplotypeScore;set=inputR	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,141,1840	0/0:13,0:13:18.07:0,18,365	0/0:19,0:19:51.09:0,51,592	0/0:26,0:26:62.32:0,62,776	0/0:23,0:23:66.16:0,66,808	0/0:25,0:25:69.21:0,69,892	0/0:25,0:25:72.21:0,72,917	1/1:3,24:27:72.11:744,72,0	0/0:22,0:22:66.18:0,66,827	0/0:23,0:23:66.19:0,66,832	0/0:19,0:19:42.12:0,42,536	0/0:30,0:30:81.24:0,81,1033	0/0:28,0:28:81.26:0,81,1064	0/0:27,0:27:78.21:0,78,982	0/0:33,0:32:93.26:0,93,1170	0/0:9,0:9:27.09:0,27,355	1/1:2,33:35:84.21:902,84,0	1/1:1,15:16:39.10:419,39,0	0/0:16,0:16:39.11:0,39,488	0/0:18,0:18:48.14:0,48,605	0/0:44,0:44:99:0,105,1367	0/0:24,0:24:60.03:0,60,733	1/1:2,8:10:24.06:258,24,0	1/1:5,29:34:84.88:924,85,0	0/0:21,0:21:60.14:0,60,768	0/0:28,0:28:81.24:0,81,1026	0/0:38,0:38:99:0,111,1403	0/0:12,0:12:36.01:0,36,366
chr10_random	704484	.	T	TA	9584.84	PASS	AB=0.600;AC=27;AF=0.482;AN=56;BaseQRankSum=-8.016;DP=701;FS=3.410;HRun=7;HaplotypeScore=75.9670;InbreedingCoeff=0.9122;MQ=75.10;MQ0=0;MQRankSum=-0.520;QD=29.04;ReadPosRankSum=-0.650;VQSLOD=5.1541;culprit=HaplotypeScore;set=inputR	GT:AD:DP:GQ:PL	1/1:3,48:51:99:1558,129,0	0/1:2,4:6:13.93:130,0,14	0/0:16,0:16:15.98:0,16,169	0/0:18,0:18:29.99:0,30,275	1/1:4,25:29:72.15:851,72,0	0/0:22,0:22:60.09:0,60,579	0/0:41,0:41:99:0,117,1119	1/1:1,17:18:51.10:568,51,0	0/0:20,0:20:54.05:0,54,509	0/0:40,0:40:99:0,99,952	0/0:21,0:21:63.07:0,63,601	0/0:30,0:30:78.01:0,78,725	0/0:32,0:32:87.13:0,87,836	0/0:23,0:23:63.10:0,63,608	0/0:34,0:34:84.13:0,84,811	0/0:22,0:22:57.08:0,57,545	1/1:1,26:27:66.20:797,66,0	1/1:2,14:16:39.12:471,39,0	1/1:2,22:24:66.19:787,66,0	1/1:4,17:21:54.17:651,54,0	1/1:7,22:29:51.16:616,51,0	0/0:26,0:26:66.07:0,66,627	1/1:0,20:20:50.93:616,51,0	1/1:5,20:25:13.86:639,14,0	0/0:25,0:25:75.08:0,75,708	1/1:4,23:27:43.24:793,43,0	1/1:2,33:35:87.22:1034,87,0	1/1:0,2:2:6.02:72,6,0
chr10_random	705288	.	GCA	G	361.14	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.518;DP=646;FS=14.207;HRun=0;HaplotypeScore=154.7553;InbreedingCoeff=0.8029;MQ=63.68;MQ0=1;MQRankSum=-1.678;QD=6.95;ReadPosRankSum=-3.506;VQSLOD=2.0272;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	1/1:24,10:34:29.48:265,29,0	0/0:14,0:14:38.16:0,38,664	0/0:11,0:7:4.28:0,4,98	0/0:12,0:7:1.45:0,1,57	1/1:9,9:18:18.02:215,18,0	0/0:19,0:19:57.20:0,57,1106	0/0:31,0:31:90.29:0,90,1717	0/0:10,0:10:30.05:0,30,367	0/0:22,0:22:63.21:0,63,1173	0/0:43,0:43:99:0,129,2565	0/0:16,0:16:48.15:0,48,910	0/0:27,0:27:75.23:0,75,1425	0/0:16,0:16:48.16:0,48,933	0/0:18,0:18:54.17:0,54,1004	0/0:15,0:15:45.14:0,45,808	0/0:16,0:16:45.15:0,45,869	0/0:35,0:35:78.20:0,78,907	0/0:27,0:27:66.16:0,66,727	0/0:20,0:20:56.30:0,56,952	0/0:24,0:23:7.07:0,7,378	0/0:47,0:48:87.36:0,87,1767	0/0:28,0:28:84.29:0,84,1634	0/0:20,0:20:45.03:0,45,491	0/0:35,0:35:93.19:0,93,1150	0/0:22,0:22:66.21:0,66,1273	0/0:27,0:27:78.23:0,78,1507	0/0:20,0:20:48.16:0,48,865	0/0:17,0:17:41.63:0,42,748
chr10_random	705297	.	TGC	T	3217.50	PASS	AB=0.979;AC=19;AF=0.352;AN=54;BaseQRankSum=8.548;DP=606;FS=2.475;HRun=0;HaplotypeScore=141.7984;InbreedingCoeff=0.4517;MQ=61.22;MQ0=3;MQRankSum=0.712;QD=11.45;ReadPosRankSum=1.680;VQSLOD=3.1919;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	1/1:24,0:34:14.67:49,15,0	0/1:12,0:12:29.78:30,0,43	0/1:10,0:4:6.46:6,0,20	0/1:14,1:8:0.63:1,0,35	1/1:6,0:15:6.85:23,7,0	0/0:16,0:16:44.99:0,45,705	0/0:31,0:31:66.04:0,66,1224	./.	0/0:15,0:15:39.09:0,39,607	0/0:39,0:39:99:0,108,1746	0/0:17,0:17:45.01:0,45,727	0/0:22,0:22:60.18:0,60,1003	0/0:14,0:14:42.10:0,42,647	0/0:20,0:20:51.05:0,51,782	0/0:12,0:12:33.10:0,33,563	0/0:12,0:12:33.10:0,33,563	1/1:1,32:33:60.20:838,60,0	1/1:1,28:29:66.19:901,66,0	0/1:18,0:18:29.02:29,0,119	0/0:23,0:23:1.36:0,1,51	0/0:52,0:52:8.22:0,8,52	0/0:27,0:27:78.14:0,78,1217	1/1:0,20:20:39.13:545,39,0	1/1:3,30:33:66.22:922,66,0	0/0:25,0:25:72.18:0,72,1182	0/1:24,0:24:32.90:33,0,103	0/1:18,0:18:2.59:3,0,8	0/1:18,0:18:16.98:21,0,17
chr10_random	705300	.	G	GCA	4126.44	PASS	AB=0.875;AC=16;AF=0.296;AN=54;BaseQRankSum=6.285;DP=607;FS=5.296;HRun=0;HaplotypeScore=142.4132;InbreedingCoeff=0.7054;MQ=62.00;MQ0=4;MQRankSum=-0.257;QD=18.10;ReadPosRankSum=4.472;VQSLOD=3.5724;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	0/1:34,0:34:5.05:5,0,102	1/1:5,7:12:20.82:322,21,0	0/0:12,0:5:4.37:0,4,48	0/1:18,0:8:1.19:1,0,45	0/1:15,0:15:4.37:26,0,4	0/0:16,0:16:45.14:0,45,658	0/0:29,0:29:84.27:0,84,1236	./.	0/0:14,0:14:42.12:0,42,609	0/0:39,0:39:99:0,108,1612	0/0:17,0:17:45.12:0,45,641	0/0:23,0:23:66.19:0,66,963	0/0:15,0:15:45.01:0,45,609	0/0:20,0:20:54.06:0,54,724	0/0:12,0:12:33.11:0,33,503	0/0:14,0:14:39.11:0,39,553	0/0:33,0:33:55.96:0,56,265	0/0:30,0:31:61.43:0,61,290	1/1:6,9:16:21.63:309,22,0	0/1:0,0:24:9.57:229,0,10	1/1:4,45:50:84.24:1367,84,0	0/0:26,0:26:78.26:0,78,1161	0/0:20,0:20:36.37:0,36,173	0/0:33,0:33:67.54:0,68,341	0/0:25,0:25:72.24:0,72,1083	1/1:2,20:22:12.36:835,12,0	1/1:6,13:19:24.56:442,25,0	1/1:2,16:18:34.96:592,35,0
chr10_random	705310	.	ACACG	A	426.12	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=7.229;DP=608;FS=7.730;HRun=0;HaplotypeScore=168.5966;InbreedingCoeff=0.8795;MQ=61.34;MQ0=4;MQRankSum=-2.933;QD=15.78;ReadPosRankSum=-2.508;VQSLOD=2.4804;culprit=QD;set=inputR	GT:AD:DP:GQ:PL	1/1:12,6:18:27.08:432,27,0	0/0:12,0:12:29.61:0,30,562	0/0:14,0:5:7.58:0,8,99	0/0:18,0:7:8.71:0,9,84	1/1:9,0:9:9.03:107,9,0	0/0:14,0:14:42.13:0,42,1071	0/0:28,0:28:81.20:0,81,2052	./.	0/0:13,0:13:39.13:0,39,1064	0/0:36,0:36:99:0,108,2797	0/0:19,0:19:50.98:0,51,1278	0/0:24,0:24:72.18:0,72,1854	0/0:17,0:17:51.02:0,51,1236	0/0:24,0:24:69.12:0,69,1680	0/0:15,0:15:45.13:0,45,1103	0/0:14,0:14:39.13:0,39,1036	0/0:31,0:31:69.19:0,69,1003	0/0:30,0:30:52.44:0,52,1030	0/0:18,0:18:48.10:0,48,909	0/0:28,0:28:10.08:0,10,509	0/0:53,0:53:99:0,102,2111	0/0:27,0:27:81.21:0,81,2007	0/0:20,0:20:41.98:0,42,565	0/0:33,0:33:75.18:0,75,1089	0/0:28,0:28:84.25:0,84,2206	0/0:23,0:23:69.16:0,69,1249	0/0:21,0:21:39.13:0,39,774	0/0:21,0:21:51.01:0,51,929
chr10_random	705315	.	TGC	T	55.87	PASS	AB=0.875;AC=4;AF=0.074;AN=54;BaseQRankSum=7.364;DP=606;FS=4.275;HRun=0;HaplotypeScore=154.7136;InbreedingCoeff=0.5837;MQ=60.06;MQ0=3;MQRankSum=-3.261;QD=0.95;ReadPosRankSum=-2.107;VQSLOD=2.2926;culprit=QD;set=inputR	GT:AD:DP:GQ:PL	0/1:20,10:30:1.76:108,0,2	0/0:9,0:9:20.74:0,21,358	0/0:13,0:5:8.31:0,8,41	0/1:16,0:5:7.37:18,0,7	1/1:4,9:13:8.23:37,8,0	0/0:13,0:13:33.03:0,33,511	0/0:29,0:29:84.22:0,84,1406	./.	0/0:15,0:15:39.13:0,39,675	0/0:33,0:33:86.99:0,87,1449	0/0:19,0:19:45.05:0,45,730	0/0:24,0:24:48.64:0,49,1117	0/0:20,0:20:57.11:0,57,923	0/0:27,0:27:75.19:0,75,1217	0/0:17,0:17:45.14:0,45,756	0/0:14,0:14:30.09:0,30,497	0/0:30,0:29:69.18:0,69,1048	0/0:31,0:31:78.03:0,78,1147	0/0:16,0:16:41.94:0,42,598	0/0:27,0:27:13.08:0,13,404	0/0:46,0:46:99:0,108,1786	0/0:25,0:25:72.10:0,72,1190	0/0:17,0:17:39.13:0,39,626	0/0:31,0:31:75.10:0,75,1113	0/0:28,0:28:72.21:0,72,1220	0/0:22,0:22:54.18:0,54,921	0/0:20,0:20:36.12:0,36,600	0/0:20,0:20:48.16:0,48,822
chr10_random	706235	.	C	CCAGCGGTGGCAGCGGTGG	1418.37	PASS	AB=0.838;AC=8;AF=0.160;AN=50;BaseQRankSum=-0.189;DP=567;FS=12.655;HRun=0;HaplotypeScore=317.4515;InbreedingCoeff=0.5929;MQ=69.41;MQ0=1;MQRankSum=-2.801;QD=12.44;ReadPosRankSum=-3.005;VQSLOD=0.5183;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	0/0:42,0:42:42.14:0,42,1933	./.	0/1:12,0:14:10.39:10,0,213	0/0:10,0:10:2.98:0,3,53	0/0:8,0:8:9.03:0,9,437	0/0:17,0:17:9.03:0,9,422	0/0:49,0:49:90.24:0,90,3180	0/0:24,0:24:21.54:0,22,434	0/0:20,0:20:42.14:0,42,1894	0/0:18,0:18:6.02:0,6,291	0/0:9,0:9:6.02:0,6,291	0/0:35,0:35:75.21:0,75,3108	0/0:19,0:19:33.10:0,33,1355	0/0:23,0:23:45.15:0,45,1906	0/0:16,0:16:24.08:0,24,1014	0/0:26,0:26:54.19:0,54,2393	0/0:36,0:36:75.24:0,75,3107	0/0:25,0:25:48.16:0,48,1980	1/1:11,0:11:4.83:173,5,0	./.	0/1:54,6:63:0.36:0,0,1	0/0:8,0:8:6.02:0,6,251	0/0:9,0:9:12.93:0,13,475	0/0:38,0:38:90.31:0,90,3876	0/0:15,0:15:17.98:0,18,778	1/1:14,0:14:9.03:350,9,0	1/1:8,2:10:12.04:1010,12,0	./.
chr10_random	706255	.	AGCG	A	103.28	PASS	AB=0.742;AC=1;AF=0.019;AN=52;BaseQRankSum=3.444;DP=529;FS=1.410;HRun=0;HaplotypeScore=136.6163;InbreedingCoeff=-0.0283;MQ=73.07;MQ0=0;MQRankSum=-1.696;QD=4.49;ReadPosRankSum=-1.535;VQSLOD=2.7089;culprit=QD;set=inputR	GT:AD:DP:GQ:PL	0/0:31,0:31:75.23:0,75,1618	./.	0/0:18,0:17:48.10:0,48,986	0/0:16,0:16:29.29:0,29,569	0/0:7,0:7:15.05:0,15,345	0/0:9,0:9:21.07:0,21,464	0/0:44,0:44:99:0,129,2952	0/1:15,8:23:99:177,0,464	0/0:24,0:24:69.19:0,69,1573	0/0:14,0:14:32.78:0,33,594	0/0:6,0:6:12.01:0,12,233	0/0:34,0:34:99:0,102,2324	0/0:20,0:20:59.80:0,60,1160	0/0:24,0:24:69.15:0,69,1428	0/0:17,0:17:48.15:0,48,1059	0/0:25,0:25:72.25:0,72,1694	0/0:37,0:37:99:0,111,2608	0/0:22,0:22:63.19:0,63,1428	0/0:12,0:11:27.09:0,27,603	./.	0/0:58,0:58:90.26:0,90,1997	0/0:4,0:4:9.03:0,9,211	0/0:6,0:6:18.06:0,18,422	0/0:37,0:37:99:0,108,2485	0/0:13,0:13:30.09:0,30,641	0/0:12,0:11:29.69:0,30,628	0/0:12,0:12:33.11:0,33,656	0/0:2,0:2:6.02:0,6,141
chr10_random	706430	.	AAACAACAAC	A	470.24	PASS	AB=1.000;AC=7;AF=0.175;AN=40;BaseQRankSum=0.394;DP=446;FS=1.294;HRun=0;HaplotypeScore=131.2766;InbreedingCoeff=0.4706;MQ=62.99;MQ0=6;MQRankSum=-2.969;QD=6.03;ReadPosRankSum=1.291;VQSLOD=2.3658;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:25,0:23:1.25:0,1,3	./.	0/0:16,0:16:24.01:0,24,440	0/0:26,0:22:27.05:0,27,535	0/0:15,0:15:6.01:0,6,65	0/0:38,0:38:60.16:0,60,1414	0/0:10,0:10:17.27:0,17,391	0/0:5,0:5:0:0,0,0	0/0:25,0:25:37.37:0,37,847	0/0:19,0:19:33.11:0,33,974	0/0:28,0:28:57.04:0,57,1505	0/0:29,0:28:51.17:0,51,1329	0/0:24,0:24:42.62:0,43,1205	1/1:14,9:23:3.01:69,3,0	0/1:17,0:17:0:367,0,0	0/0:6,0:8:2.78:0,3,19	./.	./.	./.	0/0:5,0:5:1.25:0,1,3	1/1:14,17:31:1:76,1,0	0/0:3,0:3:3.01:0,3,76	0/0:10,0:14:1.68:0,2,13	1/1:4,0:7:1.13:60,1,0	./.
chr10_random	706433	.	CAACAACAACAACAACAAC	C	716.45	PASS	AB=1.000;AC=9;AF=0.180;AN=50;BaseQRankSum=1.249;DP=488;FS=14.124;HRun=0;HaplotypeScore=229.3774;InbreedingCoeff=0.3527;MQ=56.74;MQ0=17;MQRankSum=-1.724;QD=9.07;ReadPosRankSum=2.479;VQSLOD=1.3003;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	0/0:16,0:16:9.79:0,10,58	./.	0/0:20,0:16:5.90:0,6,41	0/0:23,0:21:17.77:0,18,202	./.	0/0:18,0:17:30.02:0,30,1000	0/0:30,0:24:30.06:0,30,1175	0/0:15,0:14:12.03:0,12,256	0/0:37,0:37:81.11:0,81,3259	0/0:25,0:25:36.89:0,37,1033	0/0:6,0:6:1.61:0,2,88	0/0:25,0:24:41.97:0,42,1910	0/0:19,0:19:39.07:0,39,2053	0/0:29,0:28:63.20:0,63,3140	0/0:31,0:29:60.21:0,60,3014	0/0:23,0:23:51.14:0,51,2392	0/0:24,0:24:6.85:0,7,46	0/1:18,0:18:99:179,0,164	1/1:9,0:9:4.45:114,4,0	./.	1/1:26,0:24:18.03:222,18,0	0/0:8,0:7:3.87:0,4,19	0/0:6,0:6:5.90:0,6,38	0/0:31,0:30:12.09:0,12,77	0/0:13,0:13:15.42:0,15,212	0/1:14,0:14:66.16:206,0,66	0/1:10,0:10:41.78:112,0,42	1/1:2,0:1:2.96:19,3,0
chr10_random	713339	.	TA	T	673.11	PASS	AB=0.899;AC=26;AF=0.464;AN=56;BaseQRankSum=0.155;DP=370;FS=2.073;HRun=16;HaplotypeScore=49.8459;InbreedingCoeff=0.3425;MQ=86.36;MQ0=1;MQRankSum=2.041;QD=3.32;ReadPosRankSum=1.196;VQSLOD=-0.7062;culprit=HaplotypeScore;set=inputR	GT:AD:DP:GQ:PL	0/0:26,1:27:8.73:0,9,234	1/1:6,4:10:11.55:72,12,0	0/0:25,0:17:14.85:0,15,107	0/1:21,0:17:1.86:2,0,52	1/1:6,0:7:1.87:6,2,0	0/0:3,0:16:8.56:0,9,44	0/0:4,0:20:8.77:0,9,54	1/1:4,11:17:16.69:170,17,0	0/1:7,1:8:3.04:3,0,83	1/1:7,2:10:7.75:42,8,0	0/1:3,2:5:0.79:11,0,1	0/0:7,0:8:2.13:0,2,39	0/1:14,1:15:22.20:22,0,144	0/1:9,1:10:3.15:3,0,69	1/1:7,2:9:5.64:36,6,0	1/1:11,9:22:2.24:112,2,0	0/0:26,1:29:10.59:0,11,217	0/1:11,6:17:8.37:8,0,129	1/1:3,8:12:3.62:124,4,0	0/1:9,0:9:4.09:54,0,4	1/1:13,1:15:16.47:93,16,0	0/0:4,0:5:8.83:0,9,65	0/1:4,0:4:5.11:5,0,57	0/0:12,0:12:4.55:0,5,30	0/0:2,0:2:0:0,0,0	0/0:12,0:13:5.12:0,5,63	1/1:4,6:11:13.63:78,14,0	0/0:8,0:9:18.44:0,18,119
chr10_random	713437	.	AT	A	1415.48	PASS	AB=0.840;AC=14;AF=0.250;AN=56;BaseQRankSum=8.716;DP=461;FS=2.212;HRun=12;HaplotypeScore=49.8008;InbreedingCoeff=0.5784;MQ=71.21;MQ0=1;MQRankSum=-0.556;QD=11.15;ReadPosRankSum=2.582;VQSLOD=3.0504;culprit=HaplotypeScore;set=inputR	GT:AD:DP:GQ:PL	0/0:24,0:24:63.07:0,63,621	0/0:4,0:4:9.02:0,9,91	0/0:16,0:12:20.07:0,20,210	0/1:10,0:9:13.97:14,0,34	0/0:17,0:17:36.03:0,36,354	0/0:16,0:16:35.73:0,36,340	0/0:18,2:20:1.43:0,1,352	0/0:33,0:34:68.19:0,68,705	1/1:2,11:14:28.93:215,29,0	0/0:18,0:18:30.04:0,30,292	0/0:11,0:11:30.05:0,30,300	1/1:3,14:17:35.83:279,36,0	1/1:0,14:14:32.87:255,33,0	0/0:13,0:14:35.89:0,36,343	0/0:17,0:17:21.84:0,22,383	0/0:21,2:23:4.63:0,5,400	0/0:18,0:18:30.29:0,30,426	0/0:20,0:20:54.11:0,54,548	0/1:12,2:14:13.41:13,0,241	0/0:17,0:18:12.68:0,13,294	0/0:17,2:19:1.59:0,2,371	1/1:4,11:15:26.85:209,27,0	0/1:4,9:14:1.53:163,0,2	1/1:1,19:20:56.78:441,57,0	0/1:7,1:8:5.37:5,0,118	0/0:18,1:19:18.68:0,19,357	0/0:15,0:15:42.07:0,42,421	0/0:10,1:11:6.81:0,7,244
chr10_random	713807	.	GA	G	14629.56	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=1.178;DP=598;FS=5.111;HRun=6;HaplotypeScore=65.2684;InbreedingCoeff=0.9966;MQ=74.98;MQ0=0;MQRankSum=-4.166;QD=27.55;ReadPosRankSum=2.074;VQSLOD=5.5991;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	1/1:5,36:41:99:1214,114,0	1/1:0,7:7:21.05:226,21,0	0/0:18,0:17:42.12:0,42,530	0/0:10,0:9:19.29:0,19,205	1/1:3,25:28:72.17:768,72,0	1/1:1,26:27:69.17:740,69,0	1/1:1,18:19:48.12:516,48,0	1/1:4,34:38:99:1087,102,0	1/1:0,19:19:45.11:484,45,0	1/1:1,25:26:72.16:766,72,0	1/1:3,18:21:51.13:548,51,0	1/1:0,15:15:42.11:451,42,0	1/1:2,21:23:51.13:548,51,0	0/0:20,0:20:51.17:0,51,671	1/1:3,26:29:66.16:709,66,0	1/1:2,18:20:51.13:548,51,0	0/0:19,0:19:45.10:0,45,568	1/1:1,19:20:54.14:580,54,0	1/1:1,20:21:60.15:642,60,0	1/1:4,10:14:30.07:322,30,0	1/1:0,9:9:27.07:290,27,0	1/1:0,16:16:45.11:483,45,0	1/1:3,17:20:54.11:570,54,0	1/1:2,14:16:32.89:354,33,0	1/1:2,15:17:36.09:387,36,0	1/1:2,13:15:39.04:398,39,0	1/1:3,30:33:87.22:935,87,0	1/1:2,35:37:99:1064,99,0
chr10_random	713808	.	AA	A	14644.96	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=1.201;DP=604;FS=5.123;HRun=5;HaplotypeScore=66.6788;InbreedingCoeff=0.9966;MQ=74.17;MQ0=0;MQRankSum=-2.378;QD=27.27;ReadPosRankSum=2.097;VQSLOD=5.2215;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	1/1:41,0:41:99:1214,114,0	1/1:7,0:7:21.05:226,21,0	0/0:17,0:16:42.12:0,42,530	0/0:10,0:9:19.29:0,19,205	1/1:28,0:27:72.17:768,72,0	1/1:28,0:28:69.17:740,69,0	1/1:19,0:19:48.12:516,48,0	1/1:38,0:38:99:1087,102,0	1/1:19,0:19:45.11:484,45,0	1/1:26,0:26:72.16:766,72,0	1/1:22,0:22:51.12:548,51,0	1/1:15,0:15:42.11:451,42,0	1/1:23,0:23:51.13:548,51,0	0/0:21,0:21:51.17:0,51,671	1/1:29,0:29:66.16:709,66,0	1/1:20,0:20:51.13:548,51,0	0/0:19,0:19:45.10:0,45,568	1/1:20,0:20:57.01:596,57,0	1/1:21,0:21:60.15:642,60,0	1/1:12,4:16:30.07:322,30,0	1/1:9,0:9:27.07:290,27,0	1/1:16,0:16:45.11:483,45,0	1/1:21,0:21:54.11:570,54,0	1/1:16,0:16:32.89:354,33,0	1/1:17,0:17:36.09:387,36,0	1/1:16,0:16:39.04:398,39,0	1/1:33,0:33:87.22:935,87,0	1/1:37,0:37:99:1064,99,0
chr10_random	714105	.	TCTCTCTCTCTCTCTCTCTCTCC	T	279.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.245;DP=355;FS=7.455;HRun=0;HaplotypeScore=151.1324;InbreedingCoeff=0.5296;MQ=45.71;MQ0=37;MQRankSum=-2.095;QD=15.51;ReadPosRankSum=0.517;VQSLOD=1.4410;culprit=QD;set=inputR	GT:AD:DP:GQ:PL	1/1:4,14:16:12.04:365,12,0	0/0:4,0:4:9.03:0,9,186	0/0:5,0:2:6.02:0,6,121	0/0:16,0:2:3.01:0,3,76	0/0:11,0:10:8.87:0,9,213	0/0:20,0:18:21.71:0,22,467	0/0:26,0:23:49.23:0,49,2002	0/0:24,0:22:53:0,53,1073	0/0:9,0:9:20.43:0,20,747	0/0:8,0:7:20.96:0,21,387	0/0:13,0:12:18.06:0,18,489	0/0:11,0:11:15.99:0,16,506	0/0:12,0:9:18.27:0,18,749	0/0:11,0:11:24.08:0,24,914	0/0:5,0:5:3.01:0,3,50	0/0:20,0:19:39.07:0,39,802	0/0:22,0:18:45.07:0,45,1160	0/0:11,0:10:17.42:0,17,431	0/0:6,0:5:15.02:0,15,311	0/0:7,0:7:15.94:0,16,305	0/0:11,0:10:12.97:0,13,227	0/0:7,0:7:12.04:0,12,397	0/0:17,0:17:30.39:0,30,609	0/0:12,0:8:13.76:0,14,801	0/0:10,0:10:15.52:0,16,311	0/0:15,0:13:36.10:0,36,784	0/0:13,0:12:24.08:0,24,533	0/0:11,0:8:23.29:0,23,734
chr10_random	714132	.	CCCCT	C	611.50	PASS	AB=1.000;AC=21;AF=0.404;AN=52;BaseQRankSum=2.793;DP=328;FS=13.301;HRun=0;HaplotypeScore=46.2682;InbreedingCoeff=0.2702;MQ=39.15;MQ0=42;MQRankSum=0.206;QD=4.16;ReadPosRankSum=1.671;VQSLOD=-0.0200;culprit=QD;set=inputR	GT:AD:DP:GQ:PL	0/0:20,0:18:8.66:0,9,81	1/1:3,0:3:5.99:50,6,0	./.	0/0:31,0:3:8.52:0,9,131	1/1:7,0:7:5.60:72,6,0	0/1:16,0:13:15.40:56,0,15	0/1:15,0:13:46:46,0,62	1/1:25,0:23:25.21:218,25,0	1/1:2,9:10:8.34:79,8,0	1/1:10,0:10:0.19:94,0,0	0/1:13,0:12:0.17:0,0,0	1/1:8,0:8:2.75:7,3,0	0/0:6,0:4:0:0,0,1	0/0:8,0:8:9.63:0,10,80	./.	0/1:12,0:11:11.46:11,0,20	0/0:12,0:8:17.80:0,18,179	0/0:12,0:10:14.90:0,15,121	0/1:10,0:9:37.62:68,0,38	1/1:4,0:4:1.71:19,2,0	0/1:8,0:7:7.96:39,0,8	0/1:5,0:5:0:0,0,0	0/0:9,0:9:0.45:0,0,14	0/0:10,0:5:7.27:0,7,155	0/0:5,0:4:0.47:0,0,1	0/0:10,0:7:12.46:0,12,90	0/0:10,0:8:2.74:0,3,17	0/0:15,0:13:17.15:0,17,263
chr10_random	714134	.	CCTCT	C	1330.18	PASS	AB=0.872;AC=26;AF=0.500;AN=52;BaseQRankSum=0.673;DP=341;FS=1.878;HRun=0;HaplotypeScore=46.1115;InbreedingCoeff=0.5504;MQ=41.17;MQ0=39;MQRankSum=-0.547;QD=9.24;ReadPosRankSum=0.563;VQSLOD=2.1529;culprit=HaplotypeScore;set=inputR	GT:AD:DP:GQ:PL	0/0:22,0:21:18.53:0,19,292	1/1:4,0:4:9.02:152,9,0	./.	0/0:32,0:3:8.95:0,9,140	1/1:9,0:9:5.81:68,6,0	0/0:17,0:14:1.98:0,2,32	0/0:15,0:13:17.51:0,18,93	1/1:5,19:22:33.94:471,34,0	0/1:10,0:10:2.66:24,0,3	1/1:9,3:12:19.31:296,19,0	0/1:3,9:11:0.17:0,0,0	1/1:10,0:10:5.98:46,6,0	1/1:4,0:2:2.98:22,3,0	0/0:10,0:10:15.05:0,15,241	./.	1/1:6,6:11:3.01:39,3,0	0/0:11,0:9:15.05:0,15,269	0/0:10,0:8:12.04:0,12,169	0/1:9,0:9:7.83:162,0,8	1/1:5,0:4:3.01:44,3,0	1/1:10,0:9:5.06:98,5,0	0/1:7,0:7:0:0,0,0	1/1:8,0:8:2.99:24,3,0	0/0:7,0:3:6.02:0,6,113	1/1:6,0:5:2.87:48,3,0	0/0:12,0:8:17.70:0,18,230	0/0:10,0:8:0:0,0,0	0/0:18,0:17:26.98:0,27,480
chr10_random	714135	.	CTCT	C	963.28	PASS	AB=0.977;AC=26;AF=0.500;AN=52;BaseQRankSum=1.950;DP=329;FS=1.819;HRun=0;HaplotypeScore=43.1271;InbreedingCoeff=0.4135;MQ=41.80;MQ0=39;MQRankSum=-0.757;QD=7.35;ReadPosRankSum=0.593;VQSLOD=2.0910;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	0/0:22,0:21:18.53:0,19,277	1/1:4,0:4:8.76:103,9,0	./.	0/0:33,0:4:11.94:0,12,149	1/1:2,6:8:4.56:44,5,0	0/0:13,0:10:1.86:0,2,17	0/0:14,0:12:1.03:0,1,43	1/1:20,1:19:28.65:323,29,0	1/1:11,0:10:0.88:4,1,0	1/1:8,1:11:19.26:228,19,0	0/0:12,0:11:0:0,0,0	1/1:9,0:9:5.98:47,6,0	1/1:4,0:2:3:25,3,0	0/0:9,0:9:18.04:0,18,252	./.	0/1:11,0:10:30.45:30,0,33	0/0:10,0:8:15.04:0,15,249	0/0:10,0:8:12.04:0,12,171	0/1:9,0:9:29.02:114,0,29	1/1:4,0:3:3.48:45,3,0	1/1:10,0:9:2.74:70,3,0	0/1:7,0:7:0:0,0,0	1/1:6,0:6:2.99:24,3,0	0/1:8,0:4:15.36:15,0,124	1/1:7,0:6:3.01:49,3,0	0/0:13,0:9:20.72:0,21,283	0/0:4,6:8:0.06:0,0,0	0/0:18,0:17:23.38:0,23,471
chr10_random	714139	.	CTCTCTCTT	C	371.04	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=1.090;DP=380;FS=10.053;HRun=0;HaplotypeScore=71.0151;InbreedingCoeff=0.6363;MQ=48.40;MQ0=39;MQRankSum=-1.014;QD=11.97;ReadPosRankSum=1.048;VQSLOD=0.4472;culprit=QD;set=inputR	GT:AD:DP:GQ:PL	0/0:26,0:25:24.08:0,24,873	0/0:4,0:4:11.94:0,12,101	0/0:30,0:4:12.01:0,12,234	0/0:36,0:5:12.04:0,12,300	0/0:13,0:13:30.44:0,30,495	0/0:15,0:12:25.21:0,25,516	0/0:15,0:13:30.06:0,30,655	0/0:23,0:21:46.27:0,46,550	0/0:12,0:11:12.43:0,12,196	0/0:12,0:12:23.50:0,23,224	0/0:13,0:12:17.84:0,18,212	1/1:3,10:13:6.02:154,6,0	1/1:5,0:3:6.02:118,6,0	0/0:9,0:9:19.31:0,19,665	0/0:9,0:9:5.98:0,6,93	0/0:10,0:9:3.01:0,3,40	0/0:11,0:9:21.07:0,21,762	0/0:11,0:9:15.05:0,15,504	0/0:15,0:14:24.07:0,24,398	0/0:4,0:3:6.02:0,6,92	0/0:8,0:9:6.48:0,6,63	0/0:3,8:11:0.47:0,0,1	1/1:4,2:6:5.94:149,6,0	1/1:7,0:4:3.01:77,3,0	0/0:8,0:7:9.02:0,9,149	0/0:17,0:13:27.09:0,27,858	0/0:9,0:7:4.37:0,4,77	0/0:26,0:25:53.66:0,54,1700
chr10_random	714680	.	CAT	C	1957.77	PASS	AB=0.994;AC=21;AF=0.375;AN=56;BaseQRankSum=-3.825;DP=409;FS=21.910;HRun=0;HaplotypeScore=69.7083;InbreedingCoeff=0.4552;MQ=64.60;MQ0=3;MQRankSum=-0.947;QD=11.94;ReadPosRankSum=-2.863;VQSLOD=1.1759;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	0/0:35,0:35:37.07:0,37,507	0/1:8,0:8:22.13:38,0,22	0/0:21,0:15:38.20:0,38,420	0/0:17,0:13:32.91:0,33,322	1/1:8,0:8:16.26:144,16,0	0/0:16,0:14:27.75:0,28,184	0/0:15,0:15:41.39:0,41,305	1/1:12,0:12:30.96:234,31,0	0/0:14,0:14:14.39:0,14,116	1/1:14,0:14:11.10:219,11,0	1/1:6,0:6:7.95:72,8,0	0/0:11,0:11:13.24:0,13,87	0/0:6,0:6:13.28:0,13,83	0/0:10,0:10:23.74:0,24,243	1/1:12,3:15:14.77:311,15,0	0/1:22,1:23:6.11:405,0,6	0/0:25,0:25:50.10:0,50,589	0/0:26,0:26:46.60:0,47,300	1/1:6,0:6:12.42:98,12,0	0/1:11,0:11:15.08:141,0,15	0/1:17,0:17:92.69:103,0,93	0/0:14,0:14:23.22:0,23,150	0/0:8,0:7:9.47:0,9,102	0/0:27,0:27:31.17:0,31,263	1/1:10,2:12:29.78:236,30,0	0/1:13,0:13:17.09:17,0,161	0/1:12,0:12:27.49:130,0,27	0/1:7,0:7:7.22:7,0,55
chr10_random	714682	.	TACAC	T	92.87	PASS	AB=1.000;AC=4;AF=0.077;AN=52;BaseQRankSum=-0.615;DP=445;FS=5.794;HRun=0;HaplotypeScore=96.5165;InbreedingCoeff=0.2017;MQ=60.97;MQ0=4;MQRankSum=-1.173;QD=1.63;ReadPosRankSum=1.871;VQSLOD=1.4551;culprit=HaplotypeScore;set=inputR	GT:AD:DP:GQ:PL	0/0:35,0:35:45.14:0,45,839	0/0:8,0:8:9.03:0,9,181	./.	./.	0/0:10,0:10:20.99:0,21,252	0/0:16,0:14:5.95:0,6,68	0/0:15,0:20:3.01:0,3,52	0/0:13,0:13:8.93:0,9,77	0/0:16,0:16:6:0,6,78	0/0:12,0:12:15.01:0,15,184	0/0:8,0:8:11.68:0,12,122	0/0:11,0:11:8.96:0,9,124	0/0:6,0:12:2.90:0,3,51	0/0:13,0:13:20.97:0,21,259	0/0:17,0:16:5.36:0,5,184	0/0:22,0:22:27.03:0,27,373	0/0:26,0:25:41.93:0,42,665	1/1:17,9:26:11.97:165,12,0	0/0:8,0:8:5.97:0,6,59	0/0:13,0:13:12:0,12,188	0/0:20,0:20:33.05:0,33,619	0/0:15,0:15:15.04:0,15,269	0/0:9,0:8:5.77:0,6,118	0/0:27,0:27:14.13:0,14,194	0/1:14,0:14:8.74:9,0,54	0/1:17,0:17:22.96:23,0,95	0/0:14,0:14:23.98:0,24,327	0/0:7,0:7:6.28:0,6,46
chr10_random	715473	.	CTT	C	4712.02	PASS	AB=0.666;AC=23;AF=0.411;AN=56;BaseQRankSum=-1.657;DP=655;FS=4.270;HRun=14;HaplotypeScore=97.2126;InbreedingCoeff=0.7941;MQ=72.22;MQ0=0;MQRankSum=0.037;QD=14.45;ReadPosRankSum=4.296;VQSLOD=4.2773;culprit=HaplotypeScore;set=inputR	GT:AD:DP:GQ:PL	0/0:24,0:27:50.09:0,50,576	1/1:1,10:11:27.02:250,27,0	0/0:18,0:15:20.64:0,21,185	0/0:8,0:8:5.69:0,6,31	0/1:12,20:38:33.71:441,0,34	0/0:18,0:21:43.56:0,44,478	0/0:16,0:16:36.07:0,36,452	1/1:9,13:25:18.07:343,18,0	0/0:6,0:21:33.44:0,33,144	1/1:12,20:33:15.58:482,16,0	0/1:8,14:23:0.36:283,0,0	0/0:11,0:31:40.57:0,41,389	0/0:12,0:30:33.96:0,34,317	0/0:22,0:24:63.02:0,63,772	1/1:9,24:34:60.05:644,60,0	1/1:6,17:26:47.01:396,47,0	0/0:14,0:17:35.57:0,36,410	0/1:9,2:12:25.96:26,0,237	1/1:8,5:14:17.68:150,18,0	1/1:6,21:27:62.53:599,63,0	1/1:11,6:19:20.48:215,20,0	0/0:6,0:20:36.01:0,36,351	0/0:7,0:26:46.41:0,46,437	0/0:5,0:25:42.08:0,42,428	1/1:9,10:23:34.57:328,35,0	0/0:22,0:27:56.47:0,56,595	1/1:9,25:41:53.14:554,53,0	0/0:14,0:16:29.48:0,29,298
chr10_random	715474	.	TTT	T	4711.98	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-1.164;DP=658;FS=3.057;HRun=13;HaplotypeScore=97.3642;InbreedingCoeff=0.7945;MQ=70.79;MQ0=0;MQRankSum=-0.215;QD=14.59;ReadPosRankSum=4.404;VQSLOD=4.1161;culprit=HaplotypeScore;set=inputR	GT:AD:DP:GQ:PL	0/0:27,0:27:50.09:0,50,576	1/1:11,0:11:27.02:250,27,0	0/0:19,0:14:23.64:0,24,214	0/0:8,0:8:5.69:0,6,31	0/1:38,0:38:33.71:441,0,34	0/0:22,0:22:43.56:0,44,478	0/0:16,0:16:36.07:0,36,452	1/1:25,0:25:18.07:343,18,0	0/0:24,0:24:36.43:0,36,168	1/1:33,0:33:15.58:482,16,0	0/1:22,0:22:0.36:283,0,0	0/0:31,0:31:43.56:0,44,413	0/0:28,0:28:33.96:0,34,317	0/0:24,0:24:63.02:0,63,772	1/1:34,0:34:60.05:644,60,0	1/1:26,0:26:47.01:396,47,0	0/0:16,0:16:35.57:0,36,410	0/1:12,0:12:25.96:26,0,237	1/1:13,0:13:17.68:150,18,0	1/1:21,6:27:62.53:599,63,0	1/1:19,0:19:20.48:215,20,0	0/0:20,0:20:36.01:0,36,351	0/0:29,0:29:49.41:0,49,462	0/0:26,0:26:45.07:0,45,451	1/1:22,0:22:34.57:328,35,0	0/0:26,0:26:56.47:0,56,595	1/1:41,0:41:53.10:554,53,0	0/0:19,0:19:38.44:0,38,367
chr10_random	716104	.	GA	G	2104.11	PASS	AB=0.981;AC=23;AF=0.411;AN=56;BaseQRankSum=15.208;DP=567;FS=0.000;HRun=10;HaplotypeScore=100.8469;InbreedingCoeff=0.6579;MQ=79.56;MQ0=0;MQRankSum=-0.318;QD=7.11;ReadPosRankSum=0.402;VQSLOD=1.8928;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	0/0:18,0:18:44.78:0,45,466	0/1:8,0:8:45.52:52,0,46	0/1:23,1:20:2.43:2,0,148	0/1:16,1:15:12.39:12,0,52	1/1:24,0:24:23.23:210,23,0	0/0:18,1:19:25.08:0,25,498	0/0:17,0:17:43.32:0,43,443	1/1:27,0:27:56.22:276,56,0	0/0:11,0:11:30.07:0,30,325	1/1:19,0:19:28.14:203,28,0	1/1:23,0:23:31.87:226,32,0	0/0:17,0:17:48.09:0,48,505	0/0:16,1:17:16.03:0,16,387	0/0:17,0:17:45.12:0,45,497	0/1:21,0:21:1.47:120,0,1	0/1:25,0:25:8.60:162,0,9	0/0:25,0:26:59.16:0,59,663	0/0:27,0:27:72.13:0,72,763	1/1:21,0:21:22.88:188,23,0	1/1:32,0:32:2.65:269,3,0	1/1:11,0:11:25.70:130,26,0	0/0:17,1:18:13.05:0,13,365	0/0:21,1:22:28.12:0,28,524	0/0:15,0:15:42.10:0,42,456	1/1:18,0:18:42.61:206,43,0	0/0:28,4:32:7.64:0,8,737	1/1:26,0:26:48.99:254,49,0	0/0:14,0:15:44.90:0,45,450
chr10_random	716113	.	AAG	A	2318.71	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=15.572;DP=563;FS=0.324;HRun=0;HaplotypeScore=117.4539;InbreedingCoeff=0.8637;MQ=75.58;MQ0=0;MQRankSum=0.744;QD=8.92;ReadPosRankSum=-0.103;VQSLOD=3.3820;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	0/0:18,0:18:51.12:0,51,798	0/1:10,0:10:17.80:63,0,18	0/0:21,0:17:33.67:0,34,371	0/0:14,0:12:18.83:0,19,191	1/1:22,1:23:58.66:277,59,0	0/0:20,0:20:60.07:0,60,926	0/0:15,0:15:45.15:0,45,761	1/1:32,1:33:80.73:477,81,0	0/0:12,0:12:36.10:0,36,559	1/1:21,0:21:46.94:225,47,0	1/1:21,1:22:53.36:256,53,0	0/0:19,0:19:57.15:0,57,874	0/0:16,0:16:48.04:0,48,739	0/0:16,0:16:48.15:0,48,794	1/1:16,2:18:18.01:162,18,0	0/1:25,0:25:6.32:122,0,6	0/0:24,0:24:58.35:0,58,1107	0/0:26,0:26:78.25:0,78,1293	1/1:19,0:19:47.66:225,48,0	1/1:32,0:32:36.64:296,37,0	1/1:10,1:11:26.38:128,26,0	0/0:16,0:16:45.01:0,45,655	0/0:26,0:26:72.02:0,72,1006	0/0:14,0:14:42.14:0,42,718	1/1:17,0:17:38.95:146,39,0	0/0:31,0:31:76.64:0,77,1383	1/1:29,0:29:44.04:164,44,0	0/0:15,0:15:45.15:0,45,746
chr10_random	716114	.	AG	A	8130.02	PASS	AB=0.955;AC=25;AF=0.446;AN=56;BaseQRankSum=8.143;DP=560;FS=0.000;HRun=1;HaplotypeScore=86.5288;InbreedingCoeff=0.9244;MQ=75.68;MQ0=0;MQRankSum=1.083;QD=29.35;ReadPosRankSum=-0.548;VQSLOD=4.3306;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	0/0:18,0:18:51.08:0,51,622	1/1:2,8:10:11:234,11,0	0/1:20,1:17:8.07:8,0,236	0/0:14,0:12:17.49:0,17,139	1/1:1,21:22:65.49:751,65,0	0/0:20,0:20:56.56:0,57,725	0/0:15,0:15:45.14:0,45,598	1/1:1,32:33:99:1140,99,0	0/0:12,0:12:36.09:0,36,452	1/1:1,19:20:53.75:689,54,0	1/1:1,21:22:62.97:783,63,0	0/0:19,0:19:57.14:0,57,715	0/0:16,0:16:44.53:0,45,564	0/0:16,0:16:48.15:0,48,637	1/1:3,15:18:34.37:446,34,0	1/1:2,22:24:10.28:600,10,0	0/0:23,0:23:69.05:0,69,891	0/0:27,0:27:81.19:0,81,1040	1/1:0,18:18:54.15:694,54,0	1/1:10,22:32:80.49:1060,80,0	1/1:1,10:11:29.99:391,30,0	0/0:16,0:16:41.50:0,42,522	0/0:26,0:26:71.58:0,72,842	0/0:14,0:14:42.14:0,42,571	1/1:0,17:17:45.15:626,45,0	0/0:32,0:32:45.62:0,46,1045	1/1:0,29:29:51.14:708,51,0	0/0:15,0:15:45.08:0,45,580
chr10_random	716115	.	GA	G	2327.92	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=15.844;DP=564;FS=0.702;HRun=10;HaplotypeScore=106.7299;InbreedingCoeff=0.7973;MQ=76.30;MQ0=0;MQRankSum=0.024;QD=8.99;ReadPosRankSum=1.768;VQSLOD=2.4673;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	0/0:17,0:17:51.17:0,51,797	0/1:10,0:10:42.95:59,0,43	0/0:20,0:17:27.45:0,27,339	0/0:13,1:12:18.57:0,19,173	1/1:23,0:23:23.62:238,24,0	0/0:20,0:20:60.19:0,60,925	0/0:15,0:15:45.15:0,45,715	1/1:33,0:33:60.87:297,61,0	0/0:15,0:15:45.11:0,45,639	0/1:20,0:20:5.55:171,0,6	1/1:22,0:22:52.48:283,52,0	0/0:19,0:19:57.18:0,57,864	0/0:16,0:16:48.14:0,48,722	0/0:16,0:16:48.16:0,48,764	1/1:18,0:18:4.31:138,4,0	1/1:24,0:24:0.08:188,0,0	0/0:23,0:23:69.23:0,69,1077	0/0:27,0:27:81.28:0,81,1280	1/1:18,0:18:40.91:189,41,0	1/1:23,10:33:9.57:359,10,0	1/1:11,0:11:27.25:139,27,0	0/0:15,0:15:45.14:0,45,688	0/0:25,0:25:75.22:0,75,1129	0/0:14,0:14:42.14:0,42,670	1/1:18,0:18:20.72:205,21,0	0/0:33,0:33:84.59:0,85,1418	1/1:29,0:29:49.34:270,49,0	0/0:15,0:15:45.15:0,45,714
chr10_random	716779	.	CA	C	1190.37	PASS	AB=0.984;AC=29;AF=0.518;AN=56;BaseQRankSum=5.496;DP=437;FS=1.460;HRun=1;HaplotypeScore=64.0511;InbreedingCoeff=-0.0385;MQ=72.70;MQ0=0;MQRankSum=-1.414;QD=3.31;ReadPosRankSum=3.285;VQSLOD=0.1791;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	0/1:19,1:20:26.43:107,0,26	0/1:6,0:6:1.20:1,0,20	0/0:13,1:14:24.72:0,25,299	0/1:19,2:19:18.64:19,0,224	1/1:11,2:12:25.51:151,26,0	0/0:14,0:14:16.27:0,16,335	0/1:29,0:29:60.93:61,0,279	0/0:16,0:16:17.98:0,18,165	0/1:8,0:8:11.15:11,0,39	0/0:9,0:9:0.02:0,0,46	1/1:10,1:11:18.85:108,19,0	1/1:18,1:19:18.67:115,19,0	1/1:14,0:14:12.49:64,12,0	0/1:14,0:14:25.25:25,0,207	1/1:15,2:17:26.34:135,26,0	0/1:23,1:24:28.68:134,0,29	0/1:23,1:24:6.83:7,0,345	0/0:14,0:14:5.85:0,6,176	0/1:10,0:10:7.03:7,0,108	0/1:17,0:17:3.31:66,0,3	0/1:30,1:31:38.55:39,0,43	1/1:9,0:9:7.09:20,7,0	0/1:9,0:9:21.85:22,0,26	0/1:26,0:26:11.43:102,0,11	0/1:11,0:11:13.33:29,0,13	0/0:10,0:9:11.35:0,11,105	1/1:20,0:20:31.39:137,31,0	0/1:7,0:7:5.12:5,0,69
chr10_random	787667	.	C	CT	2044.71	PASS	AB=1.000;AC=25;AF=0.463;AN=54;BaseQRankSum=8.567;DP=422;FS=5.358;HRun=1;HaplotypeScore=62.9998;InbreedingCoeff=0.8687;MQ=78.55;MQ0=1;MQRankSum=-4.152;QD=11.62;ReadPosRankSum=-0.168;VQSLOD=1.7024;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	1/1:23,0:23:37.71:391,38,0	0/0:5,0:5:12:0,12,133	0/0:23,0:18:49.51:0,50,495	0/0:20,0:17:22.10:0,22,232	0/0:19,0:19:56.25:0,56,559	1/1:9,0:9:3:27,3,0	1/1:17,0:17:20.51:216,21,0	1/1:6,11:17:29.85:243,30,0	0/0:18,0:18:41.63:0,42,420	1/1:9,0:9:21.01:206,21,0	1/1:5,1:6:11.97:104,12,0	1/1:5,0:15:8.85:72,9,0	1/1:13,0:13:14.93:137,15,0	1/1:11,0:11:14.94:123,15,0	0/0:13,0:13:35.95:0,36,341	0/1:11,0:11:36.14:107,0,36	0/0:26,0:26:74.85:0,75,785	0/0:16,0:16:45.01:0,45,451	0/0:20,0:20:54.02:0,54,543	0/0:12,0:12:32.34:0,32,310	0/0:26,0:27:65.94:0,66,673	1/1:15,0:15:10.65:175,11,0	1/1:12,1:13:17.77:152,18,0	1/1:17,0:17:33.03:306,33,0	0/0:15,0:16:38.97:0,39,387	0/0:14,0:14:32.98:0,33,325	0/0:14,0:14:22.91:0,23,349	./.
chr10_random	787668	.	T	TTC	3731.83	PASS	AB=0.917;AC=25;AF=0.463;AN=54;BaseQRankSum=5.256;DP=439;FS=12.652;HRun=0;HaplotypeScore=77.8884;InbreedingCoeff=0.8826;MQ=76.47;MQ0=1;MQRankSum=-6.254;QD=19.34;ReadPosRankSum=-1.729;VQSLOD=2.2626;culprit=HaplotypeScore;set=inputR	GT:AD:DP:GQ:PL	1/1:22,0:22:42.03:396,42,0	0/0:5,0:5:14.99:0,15,185	0/0:22,0:18:52.73:0,53,601	0/0:19,0:16:28.75:0,29,335	0/0:20,0:20:56.27:0,56,642	1/1:1,1:11:3.01:53,3,0	1/1:6,2:24:36:512,36,0	1/1:15,0:15:29.85:244,30,0	0/0:17,0:18:44.32:0,44,510	1/1:3,2:10:24.06:373,24,0	1/1:4,5:9:14.95:174,15,0	1/1:12,0:15:9.37:103,9,0	1/1:1,7:13:15.05:254,15,0	1/1:1,2:13:18.06:259,18,0	0/0:11,0:12:36.02:0,36,398	0/1:10,0:11:36.49:130,0,36	0/0:24,0:25:74.88:0,75,937	0/0:16,0:16:44.74:0,45,506	0/0:20,0:20:57.02:0,57,659	0/0:13,0:13:32.34:0,32,376	0/0:27,0:26:65.98:0,66,809	1/1:5,4:19:22.90:412,23,0	1/1:1,1:13:20.89:259,21,0	1/1:0,3:18:33.11:565,33,0	0/0:16,0:16:39:0,39,476	0/0:13,0:14:32.35:0,32,369	0/0:16,0:16:22.94:0,23,449	./.
chr10_random	790427	.	T	TA	11954.72	PASS	AB=0.931;AC=27;AF=0.500;AN=54;BaseQRankSum=2.435;DP=608;FS=1.744;HRun=1;HaplotypeScore=73.0366;InbreedingCoeff=0.9266;MQ=85.46;MQ0=0;MQRankSum=-4.839;QD=40.25;ReadPosRankSum=1.527;VQSLOD=5.5685;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	1/1:2,43:45:99:1965,123,0	0/0:11,0:11:33.11:0,33,453	0/0:24,0:23:63.20:0,63,856	0/0:28,0:26:78.23:0,78,1015	0/0:15,0:15:42.14:0,42,587	1/1:0,14:14:36.12:575,36,0	1/1:0,31:31:87.30:1391,87,0	1/1:1,17:18:54.18:863,54,0	0/0:25,0:25:75.24:0,75,1032	1/1:0,25:25:72.25:1149,72,0	1/1:0,15:15:36.11:575,36,0	./.	1/1:1,16:17:44.80:719,45,0	1/1:0,17:17:48.16:767,48,0	0/0:16,0:16:48.16:0,48,668	1/1:0,19:19:54.18:863,54,0	0/0:19,0:19:57.19:0,57,797	0/0:16,0:16:48.14:0,48,652	0/0:26,0:26:75.21:0,75,998	0/0:13,0:13:39.12:0,39,528	0/0:62,0:62:99:0,183,2496	1/1:0,10:10:27.09:432,27,0	1/1:0,10:10:24.08:384,24,0	1/1:0,33:33:96.33:1535,96,0	0/0:15,0:15:42.14:0,42,587	0/1:25,2:27:17.72:18,0,929	0/0:18,0:18:54.18:0,54,755	1/1:0,16:16:45.15:719,45,0
chr10_random	791538	.	T	TAGGA	14902.60	PASS	AC=26;AF=0.481;AN=54;BaseQRankSum=7.359;DP=622;FS=1.445;HRun=0;HaplotypeScore=113.2320;InbreedingCoeff=0.9657;MQ=60.28;MQ0=2;MQRankSum=-6.532;QD=58.21;ReadPosRankSum=1.552;VQSLOD=6.2830;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	1/1:5,29:37:78.22:1935,78,0	0/0:5,0:5:15.05:0,15,280	0/0:20,0:14:36.12:0,36,672	0/0:32,0:29:60.95:0,61,1083	0/0:25,0:25:72.23:0,72,1305	1/1:3,16:20:45.15:1200,45,0	1/1:7,13:22:42.14:1112,42,0	1/1:3,10:12:33.11:827,33,0	0/0:30,0:30:87.28:0,87,1593	1/1:3,18:21:57.15:1379,57,0	1/1:1,8:9:21.07:559,21,0	1/1:7,22:29:69.24:1827,69,0	1/1:4,7:13:27.53:595,28,0	1/1:2,15:17:45.15:1157,45,0	0/0:27,0:27:81.28:0,81,1491	1/1:2,16:18:48.16:1279,48,0	0/0:33,0:32:96.29:0,96,1725	0/0:22,0:22:66.23:0,66,1202	0/0:28,0:28:78.27:0,78,1441	0/0:18,0:18:51.17:0,51,952	0/0:63,0:63:99:0,172,3118	1/1:2,9:12:30.06:716,30,0	1/1:1,17:18:42.14:1118,42,0	1/1:5,20:26:45.15:1199,45,0	0/0:14,0:14:36.11:0,36,641	0/0:29,1:29:1.39:0,1,1318	0/0:19,0:18:51.17:0,51,951	./.
chr10_random	791741	.	C	CA	4983.76	PASS	AB=0.805;AC=37;AF=0.661;AN=56;BaseQRankSum=-3.489;DP=606;FS=0.000;HRun=12;HaplotypeScore=75.0862;InbreedingCoeff=0.5904;MQ=69.49;MQ0=2;MQRankSum=-1.541;QD=11.64;ReadPosRankSum=0.118;VQSLOD=4.5312;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	1/1:13,2:38:60.39:320,60,0	1/1:3,11:16:28.99:297,29,0	0/1:23,1:20:15.63:16,0,54	0/1:19,0:18:15.37:15,0,59	0/1:6,20:27:1.15:426,0,1	1/1:2,15:18:19.95:332,20,0	0/1:5,15:21:20.82:290,0,21	1/1:14,2:38:69.05:346,69,0	0/0:21,2:24:4.77:0,5,338	1/1:6,12:18:36.06:350,36,0	1/1:5,13:18:14.46:285,14,0	1/1:8,8:16:24.04:233,24,0	1/1:3,10:12:18.03:175,18,0	1/1:2,13:15:21.03:204,21,0	1/1:2,12:14:18.03:175,18,0	1/1:3,0:13:6.66:107,7,0	0/0:32,1:33:57.24:0,57,575	0/0:21,0:21:53.68:0,54,394	0/1:24,2:26:5.73:6,0,274	0/0:23,0:23:46.75:0,47,334	0/0:25,1:26:24.47:0,24,341	1/1:3,20:23:32.19:473,32,0	1/1:3,11:14:5.35:212,5,0	1/1:6,17:23:23.17:387,23,0	1/1:7,11:22:35.40:291,35,0	0/0:23,0:24:52.68:0,53,375	0/0:26,0:26:56.55:0,57,409	1/1:1,0:5:8.52:43,9,0
chr10_random	792935	.	GCG	G	94.04	PASS	AB=0.976;AC=13;AF=0.241;AN=54;BaseQRankSum=2.585;DP=178;FS=3.153;HRun=0;HaplotypeScore=31.7760;InbreedingCoeff=-0.2418;MQ=78.62;MQ0=0;MQRankSum=-0.883;QD=0.98;ReadPosRankSum=1.114;VQSLOD=1.1114;culprit=HaplotypeScore;set=inputR	GT:AD:DP:GQ:PL	0/1:12,0:12:15.14:15,0,32	0/1:3,0:3:0.25:0,0,13	0/0:16,0:11:11.63:0,12,118	0/0:7,0:6:12:0,12,117	0/0:3,0:3:0:0,0,0	0/0:6,0:6:0.23:0,0,13	0/1:7,0:7:32.95:33,0,36	0/0:3,0:3:3:0,3,28	0/1:8,0:9:18.13:19,0,18	0/1:4,0:4:18:52,0,18	./.	1/1:1,7:8:1.55:4,2,0	0/0:8,0:8:5.94:0,6,57	0/0:10,0:10:12.33:0,12,96	0/1:9,0:9:9.41:9,0,31	0/0:3,0:3:3.01:0,3,37	0/0:3,0:3:5.79:0,6,34	0/0:1,0:1:2.90:0,3,16	0/1:7,0:7:16.45:16,0,49	0/0:2,0:2:2.74:0,3,12	0/1:15,0:16:6.68:7,0,99	0/0:3,0:3:8.93:0,9,63	0/1:4,0:4:16.97:17,0,19	0/1:8,0:9:8.71:9,0,61	0/0:10,0:10:14.39:0,14,105	0/0:5,0:6:2.79:0,3,19	0/1:8,0:8:26.24:39,0,26	0/0:1,0:1:2.96:0,3,19
chr10_random	792948	.	GGA	G	257.69	PASS	AB=0.840;AC=11;AF=0.212;AN=52;BaseQRankSum=4.279;DP=207;FS=61.564;HRun=0;HaplotypeScore=35.6222;InbreedingCoeff=-0.2432;MQ=86.82;MQ0=0;MQRankSum=-0.281;QD=2.63;ReadPosRankSum=6.140;VQSLOD=-0.2338;culprit=QD;set=inputR	GT:AD:DP:GQ:PL	0/0:14,0:14:19.85:0,20,196	0/1:3,0:3:13.61:17,0,14	0/0:15,0:11:15.78:0,16,200	0/0:12,0:11:21.84:0,22,198	0/0:6,0:6:1.57:0,2,42	0/1:4,2:6:9.34:47,0,9	0/1:14,1:15:1.92:2,0,259	0/0:3,0:3:9.01:0,9,83	0/1:7,5:12:99:112,0,108	0/0:7,1:8:18.81:0,19,163	./.	0/1:10,0:10:8.45:8,0,42	0/1:8,2:10:2.69:3,0,178	0/1:4,2:6:20.92:21,0,96	0/1:7,1:8:70.80:85,0,71	0/0:6,0:6:11.99:0,12,109	0/0:3,0:3:5.98:0,6,47	0/0:4,0:4:11.96:0,12,114	0/1:4,3:7:13.44:35,0,13	0/0:6,0:6:11.98:0,12,98	0/0:13,0:13:17.87:0,18,155	0/0:3,0:3:9:0,9,84	0/0:4,0:4:11.91:0,12,91	0/1:10,2:12:16.52:17,0,103	0/0:6,0:6:11.99:0,12,101	0/0:5,0:5:11.99:0,12,118	0/1:7,2:9:44.16:44,0,148	./.
chr10_random	794212	.	GGTGTGT	G	553.72	PASS	AB=1.000;AC=16;AF=0.421;AN=38;BaseQRankSum=2.141;DP=368;FS=4.836;HRun=0;HaplotypeScore=81.1892;InbreedingCoeff=0.4632;MQ=55.67;MQ0=24;MQRankSum=1.899;QD=4.69;ReadPosRankSum=0.384;VQSLOD=0.6107;culprit=QD;set=inputR	GT:AD:DP:GQ:PL	0/1:30,0:28:14.96:69,0,15	0/0:8,0:7:6.02:0,6,86	./.	./.	./.	./.	1/1:13,0:16:3.01:51,3,0	./.	0/0:12,0:12:9.50:0,10,203	1/1:9,6:14:18.01:286,18,0	0/0:1,3:4:0.89:0,1,2	1/1:11,0:10:9.03:161,9,0	1/1:4,0:4:3.01:53,3,0	1/1:5,0:5:3.01:55,3,0	0/0:18,0:17:3.01:0,3,50	0/0:6,0:6:8.86:0,9,94	0/0:24,0:24:27.09:0,27,544	0/0:15,0:11:15.03:0,15,188	0/0:17,0:15:9.03:0,9,169	0/0:9,0:9:6.01:0,6,68	./.	./.	1/1:7,0:10:0.47:1,0,0	1/1:17,0:15:0.47:0,0,0	./.	0/0:13,0:10:17.93:0,18,275	0/1:10,0:10:2.69:3,0,42	./.
chr10_random	804637	.	C	CA	1656.02	PASS	AB=0.779;AC=15;AF=0.268;AN=56;BaseQRankSum=13.686;DP=604;FS=120.719;HRun=0;HaplotypeScore=111.3828;InbreedingCoeff=-0.3544;MQ=77.89;MQ0=0;MQRankSum=-10.531;QD=5.56;ReadPosRankSum=2.674;VQSLOD=0.5224;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	0/0:36,0:37:73.55:0,74,1204	0/1:5,2:8:19.23:19,0,190	0/0:25,0:24:72.17:0,72,929	0/0:21,0:16:57.13:0,57,756	0/1:12,7:20:17.33:17,0,346	0/1:21,1:23:14.67:15,0,686	0/0:22,0:26:66.09:0,66,856	0/1:24,0:24:68.67:69,0,625	0/1:11,1:12:8.99:9,0,342	0/1:19,10:30:99:425,0,581	0/0:9,3:17:13.88:0,14,207	0/0:15,1:18:17.89:0,18,192	0/1:22,2:24:18.87:19,0,809	0/1:17,2:20:1.31:1,0,555	0/0:19,0:21:57.10:0,57,751	0/0:12,1:15:8.53:0,9,448	0/0:26,0:26:78.14:0,78,1020	0/0:21,0:21:57.15:0,57,760	0/0:15,0:16:10.16:0,10,456	0/1:11,8:20:99:227,0,224	0/0:39,0:40:99:0,105,1363	0/1:10,7:22:99:193,0,363	0/1:15,4:20:58.44:58,0,456	0/0:23,0:23:44.94:0,45,606	0/1:6,7:15:99:139,0,219	0/1:18,8:31:99:417,0,544	0/1:12,3:20:68.01:68,0,414	0/1:5,3:9:99:133,0,183
chr10_random	805252	.	GC	G	5344.39	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=11.729;DP=576;FS=8.515;HRun=8;HaplotypeScore=60.5330;InbreedingCoeff=0.9961;MQ=85.08;MQ0=0;MQRankSum=-1.488;QD=25.09;ReadPosRankSum=-1.038;VQSLOD=5.0786;culprit=HaplotypeScore;set=inputR	GT:AD:DP:GQ:PL	0/0:39,0:39:86.54:0,87,1235	0/0:13,0:13:39.11:0,39,461	0/0:15,0:15:26.87:0,27,299	0/0:23,0:24:49.62:0,50,510	1/1:1,19:20:60.10:579,60,0	0/0:15,0:15:45.14:0,45,543	0/0:20,0:20:48.15:0,48,580	1/1:7,21:28:60.09:579,60,0	0/0:17,0:17:45.14:0,45,543	0/0:17,0:17:45.13:0,45,535	0/0:16,0:16:48.11:0,48,563	0/0:17,0:17:45.14:0,45,542	0/0:14,1:15:13.15:0,13,442	0/0:16,0:16:42.11:0,42,494	1/1:2,13:15:45.07:434,45,0	0/0:11,0:11:33.08:0,33,384	0/0:33,0:33:87.27:0,87,1050	0/0:17,0:18:48:0,48,546	1/1:3,12:15:39.06:377,39,0	1/1:4,17:21:57.07:544,57,0	1/1:5,28:33:84.13:811,84,0	1/1:2,17:19:51.08:492,51,0	0/0:25,0:25:57.16:0,57,675	0/0:28,0:28:81.21:0,81,962	0/0:24,0:24:60.17:0,60,707	1/1:6,23:29:35.86:630,36,0	1/1:2,14:16:42.07:405,42,0	1/1:0,17:17:51.08:492,51,0
chr10_random	805345	.	AC	A	8920.75	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=16.477;DP=609;FS=1.743;HRun=1;HaplotypeScore=74.2668;InbreedingCoeff=0.9999;MQ=89.40;MQ0=0;MQRankSum=-3.762;QD=40.73;ReadPosRankSum=-0.088;VQSLOD=5.2698;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1765	0/0:11,0:11:33.11:0,33,528	0/0:21,0:21:62.67:0,63,899	0/0:24,0:24:50.71:0,51,929	1/1:0,21:21:60.20:837,60,0	0/0:26,0:26:78.27:0,78,1240	0/0:22,0:22:66.23:0,66,1055	1/1:0,27:27:81.26:1110,81,0	0/0:20,0:20:57.19:0,57,904	0/0:28,0:28:84.28:0,84,1313	0/0:15,0:15:45.14:0,45,696	0/0:16,0:16:48.16:0,48,760	0/0:20,0:20:60.19:0,60,936	0/0:16,0:16:48.16:0,48,760	1/1:0,18:18:54.18:755,54,0	0/0:12,0:12:36.11:0,36,553	0/0:39,0:39:99:0,114,1729	0/0:18,0:18:54.18:0,54,863	1/1:3,19:22:66.19:886,66,0	1/1:0,17:17:42.14:586,42,0	1/1:0,33:33:99:1384,99,0	1/1:0,20:20:60.20:838,60,0	0/0:24,0:24:69.24:0,69,1099	0/0:28,0:28:84.27:0,84,1319	0/0:13,0:13:39.12:0,39,601	1/1:2,23:25:75.24:1032,75,0	1/1:2,22:24:72.23:989,72,0	1/1:0,12:12:36.12:503,36,0
chr10_random	809184	.	TAC	T	5925.99	PASS	AB=0.674;AC=9;AF=0.161;AN=56;BaseQRankSum=11.581;DP=1174;FS=0.320;HRun=0;HaplotypeScore=218.6093;InbreedingCoeff=0.8642;MQ=51.95;MQ0=21;MQRankSum=4.400;QD=23.52;ReadPosRankSum=1.595;VQSLOD=5.2441;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	0/0:72,0:71:99:0,184,3014	0/0:19,0:19:36.12:0,36,601	0/0:62,0:18:19.23:0,19,474	0/0:66,0:15:21.47:0,21,359	0/0:29,0:29:26.87:0,27,455	0/0:22,0:22:48.15:0,48,789	0/0:62,0:62:99:0,162,2658	1/1:7,36:42:99:1276,102,0	0/0:31,0:30:78.21:0,78,1238	0/0:52,0:51:99:0,124,1874	0/0:20,0:20:30.10:0,30,506	0/0:47,0:47:99:0,114,1780	0/0:28,0:28:66.10:0,66,1060	0/0:32,0:32:78.23:0,78,1236	0/0:31,0:31:78.14:0,78,1252	0/0:35,0:34:87.19:0,87,1389	0/0:49,0:49:99:0,120,1962	0/0:35,0:32:77.91:0,78,1325	0/1:16,14:24:99:419,0,144	1/1:15,25:40:46.66:620,47,0	1/1:17,101:113:99:3065,237,0	0/0:52,0:52:65.88:0,66,1060	0/0:23,0:23:42.13:0,42,662	0/0:63,0:63:99:0,153,2520	0/0:33,0:33:44.06:0,44,685	0/0:45,0:44:99:0,111,1792	1/1:1,19:20:42.14:546,42,0	0/0:14,0:13:22.45:0,22,459
chr10_random	809185	.	ACA	A	5925.99	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=11.632;DP=1180;FS=0.319;HRun=0;HaplotypeScore=219.0431;InbreedingCoeff=0.8642;MQ=51.85;MQ0=22;MQRankSum=2.837;QD=23.33;ReadPosRankSum=1.465;VQSLOD=5.2062;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	0/0:72,0:71:99:0,184,3014	0/0:19,0:19:36.12:0,36,601	0/0:62,0:18:19.23:0,19,474	0/0:66,0:14:21.47:0,21,359	0/0:29,0:29:26.87:0,27,455	0/0:22,0:22:48.15:0,48,789	0/0:62,0:62:99:0,162,2658	1/1:42,0:41:99:1276,102,0	0/0:32,0:31:81.21:0,81,1262	0/0:51,0:50:99:0,124,1874	0/0:19,0:19:30.10:0,30,506	0/0:47,0:47:99:0,114,1780	0/0:28,0:28:66.10:0,66,1060	0/0:33,0:33:81.22:0,81,1260	0/0:32,0:32:81.14:0,81,1277	0/0:37,0:36:93.17:0,93,1436	0/0:49,0:49:99:0,120,1962	0/0:35,0:32:77.91:0,78,1325	0/1:32,0:25:99:419,0,144	1/1:26,14:40:46.66:620,47,0	1/1:119,0:114:99:3065,237,0	0/0:51,0:51:65.88:0,66,1060	0/0:24,0:24:45.12:0,45,686	0/0:63,0:63:99:0,156,2540	0/0:33,0:33:44.06:0,44,685	0/0:45,0:44:99:0,111,1792	1/1:21,0:21:42.14:546,42,0	0/0:14,0:13:22.45:0,22,459
chr10_random	809430	.	C	CT	532.21	PASS	AB=0.843;AC=13;AF=0.232;AN=56;BaseQRankSum=10.240;DP=583;FS=34.574;HRun=0;HaplotypeScore=204.7777;InbreedingCoeff=-0.1537;MQ=54.60;MQ0=6;MQRankSum=-5.134;QD=2.11;ReadPosRankSum=1.466;VQSLOD=1.7118;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	0/0:22,4:27:19.87:0,20,349	0/1:8,0:9:18.19:18,0,124	0/0:14,0:6:10.26:0,10,112	0/0:18,1:12:4.39:0,4,29	0/0:17,3:23:8.39:0,8,124	0/1:9,5:14:15.53:16,0,34	0/1:15,2:19:3.33:53,0,3	0/0:20,2:16:45.15:0,45,629	0/0:16,2:19:2.68:0,3,264	0/1:21,10:41:99:263,0,623	1/1:17,0:17:7.39:30,7,0	0/0:28,3:32:1.93:0,2,51	0/1:24,4:29:83.23:83,0,333	0/0:15,4:19:11.25:0,11,160	0/1:26,6:32:13.82:14,0,173	0/1:21,2:25:20.57:21,0,362	0/0:17,1:18:13.02:0,13,367	0/1:20,3:24:39.84:40,0,645	0/1:8,0:9:4.83:5,0,246	0/0:22,1:25:15.96:0,16,281	0/0:21,2:22:33.61:0,34,482	0/0:27,2:30:0.19:0,0,212	0/0:12,2:15:5.86:0,6,83	0/0:20,1:22:15.47:0,15,170	0/0:9,0:9:12.71:0,13,116	0/1:18,3:21:99:110,0,547	0/0:9,3:12:16.53:0,17,325	0/1:9,0:9:27.38:27,0,150
chr10_random	822680	.	ATG	A	750.89	PASS	AB=0.948;AC=11;AF=0.196;AN=56;BaseQRankSum=12.386;DP=443;FS=7.692;HRun=0;HaplotypeScore=75.9898;InbreedingCoeff=0.0817;MQ=65.51;MQ0=0;MQRankSum=-1.564;QD=5.25;ReadPosRankSum=4.521;VQSLOD=1.1075;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	1/1:27,0:27:26.94:247,27,0	0/1:3,0:3:16.25:21,0,16	0/1:6,0:6:2.64:3,0,40	0/0:6,0:3:8.17:0,8,49	0/1:18,0:18:41.25:163,0,41	0/0:10,0:10:30.10:0,30,584	0/0:18,0:18:51.07:0,51,802	0/0:18,0:18:45.11:0,45,735	0/0:21,0:21:28.10:0,28,691	0/0:12,0:12:36.11:0,36,647	0/0:8,0:8:21.06:0,21,359	0/1:2,14:16:8.04:8,0,19	0/1:14,0:14:48.75:67,0,49	0/0:22,0:22:50.02:0,50,881	0/0:6,0:6:18.01:0,18,222	0/1:17,0:17:0.96:187,0,1	0/0:34,0:34:86.12:0,86,1654	0/1:24,0:24:99:110,0,103	0/0:22,0:22:63.11:0,63,888	0/0:14,0:14:21.07:0,21,385	0/0:35,0:35:83.68:0,84,1298	0/0:14,0:14:42.04:0,42,588	0/0:13,0:13:35.86:0,36,526	0/0:29,0:29:81.07:0,81,1302	0/0:12,0:12:36.06:0,36,550	0/1:15,0:15:80.87:81,0,109	0/0:6,0:6:9.02:0,9,133	0/1:3,0:3:12.63:13,0,18
chr10_random	822681	.	TGC	T	2799.79	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=7.633;DP=450;FS=2.197;HRun=0;HaplotypeScore=71.1949;InbreedingCoeff=0.7086;MQ=63.62;MQ0=4;MQRankSum=-0.019;QD=17.39;ReadPosRankSum=0.312;VQSLOD=3.0694;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	1/1:19,8:27:54.12:641,54,0	1/1:3,0:3:6.02:76,6,0	1/1:6,0:5:2.74:12,3,0	0/0:8,0:3:2.22:0,2,7	1/1:4,14:18:39.10:465,39,0	0/0:10,0:10:30.09:0,30,473	0/0:19,0:19:36.03:0,36,489	0/0:19,0:19:35.97:0,36,476	0/1:20,0:20:39.61:40,0,408	0/0:13,0:13:33.05:0,33,445	0/0:8,0:8:18.04:0,18,254	1/1:15,1:15:3.01:38,3,0	1/1:4,10:14:18.06:226,18,0	0/0:24,0:24:1.24:0,1,471	0/0:7,0:6:6.02:0,6,100	1/1:6,10:16:45.14:560,45,0	0/0:33,1:34:40.39:0,40,1154	1/1:19,5:24:51.04:565,51,0	0/0:22,0:22:36.03:0,36,497	0/0:17,0:17:21.06:0,21,298	0/0:33,0:33:53.73:0,54,830	0/0:14,0:14:21.06:0,21,324	0/0:14,0:14:24.03:0,24,339	0/0:27,0:27:54.18:0,54,896	0/0:13,0:13:21.07:0,21,347	1/1:4,10:14:2.16:334,2,0	0/0:7,0:7:5.74:0,6,71	1/1:1,2:3:3.01:34,3,0
chr10_random	822701	.	AACACACACAC	A	1054.13	PASS	AB=1.000;AC=9;AF=0.173;AN=52;BaseQRankSum=6.324;DP=489;FS=15.595;HRun=0;HaplotypeScore=161.9833;InbreedingCoeff=0.7308;MQ=54.67;MQ0=8;MQRankSum=-5.266;QD=10.04;ReadPosRankSum=-1.253;VQSLOD=1.7673;culprit=QD;set=inputR	GT:AD:DP:GQ:PL	1/1:22,3:31:0.58:140,1,0	0/0:2,0:3:2.80:0,3,13	./.	./.	1/1:14,3:17:11.67:348,12,0	0/0:15,0:15:11.05:0,11,423	0/0:17,0:22:29.68:0,30,1043	0/0:16,0:16:15.05:0,15,366	0/0:18,0:20:27.09:0,27,1021	0/0:14,0:13:21.07:0,21,560	0/0:9,0:9:21.07:0,21,890	0/0:16,0:16:8.05:0,8,56	1/1:11,2:13:5.98:109,6,0	0/0:28,0:28:41.46:0,41,1407	0/0:9,0:9:21.03:0,21,794	1/1:10,12:23:26.99:591,27,0	0/0:36,0:37:69.21:0,69,2554	0/0:28,0:29:71.05:0,71,2673	0/0:17,0:16:31.66:0,32,1107	0/1:21,0:21:0:0,0,0	0/0:33,0:33:20.93:0,21,686	0/0:11,0:11:21.07:0,21,768	0/0:9,0:11:9.32:0,9,420	0/0:33,0:34:54.19:0,54,2255	0/0:11,0:10:5.48:0,5,251	0/0:16,0:16:27.09:0,27,868	0/0:4,0:13:15.86:0,16,361	0/0:8,0:8:18.06:0,18,534
chr10_random	823277	.	CGG	C	1968.83	PASS	AB=0.962;AC=14;AF=0.250;AN=56;BaseQRankSum=3.788;DP=491;FS=6.251;HRun=11;HaplotypeScore=68.2237;InbreedingCoeff=0.7540;MQ=71.39;MQ0=2;MQRankSum=1.294;QD=14.27;ReadPosRankSum=5.356;VQSLOD=1.6440;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	0/0:34,0:34:19.25:0,19,193	0/0:5,0:5:9:0,9,83	0/1:16,0:16:29.24:29,0,178	0/1:10,0:11:2.89:3,0,138	0/0:19,0:20:30.02:0,30,321	0/0:11,0:13:14.52:0,15,171	0/0:19,0:21:39.11:0,39,555	1/1:1,9:10:27.06:286,27,0	0/0:13,0:15:15.03:0,15,192	0/0:14,0:14:21.03:0,21,243	0/0:11,0:11:18:0,18,225	0/0:9,0:9:15.01:0,15,153	0/0:22,0:23:35.93:0,36,372	0/0:11,0:13:29.06:0,29,358	0/0:15,0:15:33.08:0,33,462	1/1:5,0:13:0.47:1,0,0	0/0:35,0:37:79.71:0,80,1080	0/0:25,0:25:63.16:0,63,882	1/1:9,12:21:41.81:424,42,0	1/1:0,14:14:30.07:319,30,0	1/1:5,24:29:54.13:573,54,0	0/0:10,0:10:6.13:0,6,85	0/0:15,0:16:21.04:0,21,270	0/0:23,0:26:65.15:0,65,873	0/0:13,0:15:20.54:0,21,254	0/0:17,0:18:14.40:0,14,167	1/1:5,17:22:48.07:510,48,0	0/0:12,0:12:30.09:0,30,421
chr10_random	823594	.	T	TT	1940.22	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=0.169;DP=451;FS=28.935;HRun=0;HaplotypeScore=295.9604;InbreedingCoeff=0.1902;MQ=49.91;MQ0=0;MQRankSum=-5.249;QD=4.72;ReadPosRankSum=9.871;VQSLOD=1.1757;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	1/1:11,0:11:18.08:61,18,0	1/1:7,0:7:14.65:59,15,0	0/0:5,0:5:14.61:0,15,119	0/0:6,0:6:16.48:0,16,128	1/1:36,0:36:60.46:259,60,0	0/1:17,0:17:13.23:69,0,13	1/1:7,0:7:0.33:28,0,0	0/1:20,0:20:28.85:29,0,59	0/1:14,0:14:0.93:67,0,1	1/1:23,0:23:37.88:102,38,0	0/1:26,0:26:22:135,0,22	1/1:11,0:11:9.74:33,10,0	1/1:18,0:18:17.03:95,17,0	1/1:22,0:23:18.33:157,18,0	1/1:10,0:10:23.34:82,23,0	0/1:18,0:18:43.58:62,0,44	1/1:6,0:6:14.88:53,15,0	0/1:4,0:4:6.70:7,0,14	0/1:18,0:18:5.36:5,0,54	0/0:0,29:29:2.98:0,3,21	1/1:3,0:3:2.50:9,2,0	1/1:23,0:23:22.99:140,23,0	1/1:29,0:29:40.54:210,41,0	1/1:6,0:6:14.76:56,15,0	1/1:25,0:25:4.28:127,4,0	0/1:23,0:23:7.80:68,0,8	1/1:29,0:29:10.09:172,10,0	1/1:4,0:4:5.67:16,6,0
chr10_random	823617	.	T	TT	1844.52	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=5.938;DP=494;FS=1.681;HRun=0;HaplotypeScore=231.6805;InbreedingCoeff=0.0605;MQ=55.66;MQ0=0;MQRankSum=-9.059;QD=3.85;ReadPosRankSum=11.504;VQSLOD=1.4908;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	1/1:17,0:17:3.80:64,4,0	1/1:9,0:9:13.69:45,14,0	0/0:7,1:9:3.90:0,4,58	0/0:5,0:5:2.18:0,2,9	1/1:33,0:33:17.09:197,17,0	1/1:17,0:17:18.33:87,18,0	1/1:13,0:13:27.75:100,28,0	0/1:31,0:31:13.34:13,0,172	1/1:20,0:20:5.92:66,6,0	0/1:27,0:27:42.93:51,0,43	0/1:25,0:25:2.94:99,0,3	1/1:3,7:10:4.99:18,5,0	1/1:14,0:14:23.95:94,24,0	0/1:15,0:18:34.76:75,0,35	1/1:15,0:15:10.12:65,10,0	0/1:21,0:21:41.28:70,0,41	1/1:10,0:10:21.01:80,21,0	1/1:5,0:5:8.28:27,8,0	0/1:13,0:13:2.99:3,0,167	0/1:28,0:29:5.19:15,0,5	1/1:9,0:9:7.44:45,7,0	0/1:21,0:21:20.13:106,0,20	1/1:30,0:30:57.85:221,58,0	1/1:13,0:13:17.88:75,18,0	1/1:19,0:19:31.57:123,32,0	1/1:27,0:27:25.40:110,25,0	1/1:23,0:23:11.22:112,11,0	1/1:10,0:10:5.92:27,6,0
chr10_random	824910	.	CT	C	4967.08	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=16.935;DP=558;FS=1.576;HRun=5;HaplotypeScore=71.2844;InbreedingCoeff=0.9966;MQ=77.15;MQ0=0;MQRankSum=-3.981;QD=31.04;ReadPosRankSum=2.825;VQSLOD=5.6102;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	1/1:1,21:22:60.17:680,60,0	1/1:0,6:6:18.05:203,18,0	0/0:19,0:19:38.86:0,39,500	0/0:10,0:10:16.30:0,16,245	1/1:2,26:28:69.20:782,69,0	0/0:17,0:17:45.15:0,45,614	0/0:13,0:13:33.11:0,33,452	0/0:31,0:31:81.26:0,81,1094	0/0:16,0:16:48.16:0,48,657	0/0:33,0:33:87.28:0,87,1173	0/0:30,0:30:84.25:0,84,1112	1/1:1,13:14:39.11:442,39,0	1/1:1,20:21:57.16:647,57,0	0/0:16,0:16:48.16:0,48,655	0/0:18,0:18:54.17:0,54,724	1/1:0,10:10:30.09:340,30,0	0/0:20,0:20:57.16:0,57,759	1/1:1,25:26:75.21:851,75,0	0/0:21,0:21:57.19:0,57,779	0/0:30,0:30:90.26:0,90,1181	0/0:12,0:12:36.12:0,36,493	0/0:16,0:16:48.15:0,48,634	0/0:26,0:26:78.26:0,78,1065	0/0:12,0:12:36.12:0,36,493	0/0:20,0:20:51.14:0,51,663	1/1:2,19:21:57.16:647,57,0	0/0:38,0:38:99:0,108,1444	1/1:0,12:12:33.09:374,33,0
chr10_random	825097	.	TT	T	572.46	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=13.964;DP=421;FS=0.849;HRun=1;HaplotypeScore=58.0519;InbreedingCoeff=0.5619;MQ=75.65;MQ0=0;MQRankSum=-2.487;QD=3.98;ReadPosRankSum=2.826;VQSLOD=0.4215;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	0/1:23,0:23:7.82:85,0,8	1/1:10,0:10:3.73:37,4,0	0/0:10,0:9:21:0,21,238	0/0:14,0:12:13.87:0,14,157	1/1:26,0:26:51.08:171,51,0	0/0:27,0:27:78.26:0,78,1121	0/0:10,0:10:27.09:0,27,388	0/0:19,0:19:57.18:0,57,803	0/0:6,0:6:18.06:0,18,248	0/0:17,0:17:51.16:0,51,703	0/0:22,0:22:63.17:0,63,853	1/1:14,6:20:31.02:115,31,0	0/1:8,0:7:23.03:25,0,23	0/0:15,0:15:45.15:0,45,648	0/0:12,0:12:33.09:0,33,441	0/1:8,0:8:4.51:32,0,5	0/0:16,0:16:42.08:0,42,559	0/1:10,0:10:7.45:40,0,7	0/0:14,0:14:42.10:0,42,564	0/0:16,0:16:45.12:0,45,610	0/0:8,0:8:24.06:0,24,326	0/0:14,0:14:42.13:0,42,586	0/0:15,0:15:42.13:0,42,585	0/0:3,0:3:8.99:0,9,101	0/0:21,0:21:60.20:0,60,863	0/1:25,0:25:2.48:122,0,2	0/0:18,0:17:54.15:0,54,738	1/1:14,0:14:31.26:117,31,0
chr10_random	825098	.	TA	T	3884.15	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=10.538;DP=419;FS=1.789;HRun=6;HaplotypeScore=47.6920;InbreedingCoeff=0.9568;MQ=74.80;MQ0=0;MQRankSum=-3.102;QD=26.79;ReadPosRankSum=0.617;VQSLOD=3.7081;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	1/1:5,17:22:54.04:547,54,0	1/1:0,10:10:27.07:290,27,0	0/0:10,0:9:14.27:0,14,165	0/0:13,0:11:5.12:0,5,57	1/1:5,22:27:81.17:848,81,0	0/0:28,0:28:84.22:0,84,1046	0/0:10,0:10:30.09:0,30,381	0/0:19,0:19:54.14:0,54,659	0/0:6,0:6:17.95:0,18,169	0/0:16,0:16:45.14:0,45,579	0/0:23,0:23:60.16:0,60,750	1/1:6,14:20:39.10:418,39,0	1/1:4,5:8:18.02:184,18,0	0/0:15,0:15:45.15:0,45,592	0/0:11,0:11:30.09:0,30,381	1/1:1,7:8:18.04:193,18,0	0/0:16,0:16:42.08:0,42,503	1/1:4,6:10:26.98:258,27,0	0/0:14,0:14:39.10:0,39,484	0/0:16,0:16:42.12:0,42,538	0/0:8,0:8:21.07:0,21,273	0/0:13,0:13:39.11:0,39,498	0/0:15,0:15:42.10:0,42,511	0/0:2,0:2:5.97:0,6,58	0/0:21,0:21:63.18:0,63,800	1/1:4,21:25:69.15:727,69,0	0/0:18,0:17:54.16:0,54,690	1/1:0,14:14:39.10:418,39,0
chr10_random	825214	.	CCT	C	1297.01	PASS	AB=0.946;AC=23;AF=0.411;AN=56;BaseQRankSum=8.172;DP=310;FS=0.000;HRun=0;HaplotypeScore=76.2364;InbreedingCoeff=0.3893;MQ=49.25;MQ0=27;MQRankSum=-7.577;QD=7.67;ReadPosRankSum=2.228;VQSLOD=3.2042;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	1/1:16,4:15:8.14:141,8,0	1/1:2,6:7:16.94:174,17,0	0/0:9,0:7:14.72:0,15,200	0/0:15,0:7:1.28:0,1,100	1/1:4,14:18:8.90:104,9,0	0/1:16,0:15:19.50:19,0,245	0/1:14,0:12:15.75:16,0,200	0/0:18,0:16:36.07:0,36,510	0/0:5,0:5:12.04:0,12,185	0/1:17,0:16:3.25:3,0,436	0/0:12,0:12:26.84:0,27,320	1/1:5,6:11:16.19:158,16,0	1/1:4,7:9:23.34:209,23,0	0/0:6,0:6:14.98:0,15,174	0/0:11,0:9:9.02:0,9,119	1/1:1,6:6:14.96:142,15,0	0/1:6,0:5:6.56:7,0,37	1/1:3,2:5:4.58:101,5,0	0/1:12,0:11:21.01:21,0,141	0/0:19,0:16:33.11:0,33,468	0/0:12,0:8:5.61:0,6,68	0/1:5,0:5:11.22:11,0,124	0/0:9,0:7:12.04:0,12,157	0/0:9,0:8:12.03:0,12,160	0/0:8,0:8:15.02:0,15,191	0/1:6,9:15:9.07:358,0,9	0/0:8,0:8:18.06:0,18,278	1/1:3,1:3:2.97:20,3,0
chr10_random	825243	.	TACAGAC	T	4129.90	PASS	AB=0.594;AC=17;AF=0.304;AN=56;BaseQRankSum=10.981;DP=419;FS=4.626;HRun=0;HaplotypeScore=126.8199;InbreedingCoeff=0.8616;MQ=76.88;MQ0=3;MQRankSum=-10.383;QD=40.49;ReadPosRankSum=3.327;VQSLOD=3.3560;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	1/1:7,8:14:23.96:501,24,0	1/1:1,9:10:24.08:531,24,0	0/0:35,0:27:42.46:0,42,1532	0/0:37,0:27:38.87:0,39,733	1/1:9,12:21:8.79:164,9,0	0/0:14,0:14:30.10:0,30,1008	0/0:19,0:18:47.65:0,48,1405	0/0:23,0:23:42.14:0,42,1329	0/0:8,0:8:24.08:0,24,796	0/0:16,0:16:42.14:0,42,1393	0/0:22,0:22:60.21:0,60,1976	1/1:3,8:11:30.09:593,30,0	1/1:4,9:12:30.10:636,30,0	0/0:8,0:8:24.08:0,24,711	0/0:13,0:13:24.08:0,24,793	1/1:1,6:7:21.07:468,21,0	0/0:11,0:11:27.09:0,27,863	1/1:0,5:5:9.03:201,9,0	0/0:18,0:18:48.15:0,48,1256	0/0:23,0:23:69.21:0,69,2207	0/0:9,0:9:23.98:0,24,744	0/0:13,0:13:33.11:0,33,1132	0/0:13,0:13:36.12:0,36,1215	0/0:10,0:9:21.06:0,21,651	0/0:11,0:11:33.11:0,33,1084	0/1:6,13:19:51.85:969,0,52	0/0:11,0:11:30.10:0,30,948	1/1:0,1:1:3.01:67,3,0
chr10_random	825251	.	CAG	C	827.64	PASS	AB=0.954;AC=12;AF=0.214;AN=56;BaseQRankSum=11.838;DP=449;FS=5.320;HRun=0;HaplotypeScore=117.7546;InbreedingCoeff=0.4279;MQ=80.16;MQ0=2;MQRankSum=-10.487;QD=7.07;ReadPosRankSum=3.153;VQSLOD=3.1658;culprit=QD;set=inputR	GT:AD:DP:GQ:PL	1/1:17,0:16:25.85:162,26,0	0/1:12,0:12:11.53:112,0,12	0/0:40,0:32:77.22:0,77,1250	0/0:39,0:31:34.83:0,35,622	0/1:19,2:21:35.45:55,0,35	0/0:12,0:12:33.10:0,33,603	0/0:20,0:19:51.97:0,52,872	0/0:22,0:22:51.17:0,51,947	0/0:9,0:9:27.09:0,27,509	0/0:18,0:18:54.16:0,54,944	0/0:22,0:22:63.20:0,63,1165	1/1:13,0:13:12.84:164,13,0	1/1:12,1:12:6.75:151,7,0	0/0:9,0:9:27.06:0,27,433	0/0:13,0:13:24.08:0,24,462	0/1:7,1:8:0.95:84,0,1	0/0:14,0:14:36.07:0,36,652	0/1:6,0:6:8.47:30,0,8	0/0:20,0:20:54.01:0,54,862	0/0:24,0:24:72.22:0,72,1309	0/0:11,0:11:30.01:0,30,497	0/0:12,0:12:33.11:0,33,637	0/0:14,0:14:39.12:0,39,719	0/0:11,0:10:24.07:0,24,430	0/0:11,0:11:33.11:0,33,636	0/1:21,2:23:99:223,0,114	0/0:11,0:11:32.70:0,33,569	0/1:4,0:4:9.19:9,0,29
chr10_random	825272	.	C	CA	3675.13	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=9.336;DP=478;FS=0.000;HRun=8;HaplotypeScore=98.3551;InbreedingCoeff=0.9179;MQ=74.67;MQ0=1;MQRankSum=-10.738;QD=22.55;ReadPosRankSum=-1.630;VQSLOD=2.9765;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	1/1:3,15:18:11.67:388,12,0	1/1:1,12:13:36.11:415,36,0	0/0:34,0:27:44.73:0,45,374	0/1:30,0:26:10.84:11,0,199	1/1:6,17:23:60.16:677,60,0	0/0:15,0:15:45.02:0,45,412	0/0:17,0:17:45.02:0,45,412	0/0:29,0:29:75.02:0,75,682	0/0:8,0:8:21.01:0,21,192	0/0:23,0:23:60.01:0,60,543	0/0:21,0:21:54.02:0,54,494	1/1:5,8:13:27.08:306,27,0	1/1:2,11:13:36.06:400,36,0	0/0:10,0:10:24:0,24,220	0/0:13,0:13:29.99:0,30,268	1/1:3,9:12:33.06:366,33,0	0/0:17,0:17:44.98:0,45,405	1/1:1,8:9:24.07:277,24,0	0/0:19,0:19:54:0,54,481	0/0:24,0:25:68.07:0,68,610	0/0:11,0:11:30.02:0,30,275	0/0:15,0:15:38.76:0,39,357	0/0:17,0:17:51.01:0,51,462	0/0:10,0:9:24.01:0,24,219	0/0:12,0:12:32.94:0,33,291	1/1:7,16:23:35.56:637,36,0	0/0:19,0:19:54.03:0,54,494	1/1:1,7:8:18.51:198,19,0
chr10_random	825356	.	T	TAGG	8414.57	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-11.202;DP=569;FS=0.000;HRun=0;HaplotypeScore=75.1206;InbreedingCoeff=0.9812;MQ=78.99;MQ0=0;MQRankSum=-2.796;QD=55.73;ReadPosRankSum=1.813;VQSLOD=7.0542;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	1/1:1,17:18:45.15:1005,45,0	1/1:2,4:6:18.06:369,18,0	0/0:17,0:17:48.16:0,48,760	0/0:16,0:16:42.14:0,42,653	1/1:3,21:24:63.20:1362,63,0	0/0:31,0:31:84.27:0,84,1340	0/0:17,0:17:51.17:0,51,824	0/0:27,0:27:75.25:0,75,1202	0/0:16,0:16:48.16:0,48,784	0/0:25,0:25:75.24:0,75,1177	0/0:23,0:23:66.23:0,66,1078	1/1:4,18:22:54.19:1203,54,0	1/1:1,14:15:36.12:802,36,0	0/0:13,0:13:36.12:0,36,585	0/0:28,0:28:84.29:0,84,1369	1/1:6,17:23:20.18:1361,20,0	0/0:24,0:24:69.21:0,69,1091	1/1:2,11:13:30.10:651,30,0	0/0:26,0:26:69.23:0,69,1103	0/0:29,0:29:81.28:0,81,1319	0/0:22,0:22:66.18:0,66,1022	0/0:14,0:14:39.11:0,39,590	0/0:27,0:27:75.26:0,75,1225	0/0:16,0:16:45.15:0,45,729	0/0:15,0:15:45.15:0,45,735	1/1:2,25:26:28.24:1526,28,0	0/0:32,0:32:87.30:0,87,1412	1/1:3,0:3:6.02:134,6,0
chr10_random	828123	.	AGT	A	388.91	PASS	AB=0.905;AC=13;AF=0.310;AN=42;BaseQRankSum=3.501;DP=664;FS=0.000;HRun=0;HaplotypeScore=73.0596;InbreedingCoeff=-0.2794;MQ=38.37;MQ0=177;MQRankSum=0.943;QD=1.20;ReadPosRankSum=1.737;VQSLOD=1.4413;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	0/0:28,2:21:27.09:0,27,413	0/1:14,1:11:15.85:16,0,212	./.	./.	0/0:20,0:13:21.07:0,21,318	0/0:15,0:11:15.02:0,15,170	0/0:14,1:25:23.08:0,23,488	./.	0/0:30,2:28:1.34:0,1,859	0/0:38,0:25:27.99:0,28,574	0/1:20,1:17:18.89:19,0,168	1/1:28,1:24:2.90:34,3,0	0/1:30,4:29:57.46:57,0,631	0/1:24,6:25:99:133,0,446	0/1:31,6:32:94.36:94,0,823	0/1:38,3:34:17.50:18,0,1063	0/1:24,2:24:25.70:26,0,506	0/0:29,0:20:42.14:0,42,643	./.	./.	./.	0/0:32,0:25:38.82:0,39,596	0/1:22,3:18:74.69:75,0,247	0/1:27,2:27:22.69:23,0,531	0/0:14,0:19:30.02:0,30,301	0/1:25,1:17:0.82:1,0,384	./.	0/1:5,1:3:24.90:25,0,83
chr10_random	830309	.	C	CCAGA	1161.06	PASS	AB=1.000;AC=9;AF=0.196;AN=46;BaseQRankSum=-5.380;DP=632;FS=1.888;HRun=0;HaplotypeScore=93.9913;InbreedingCoeff=0.8816;MQ=49.34;MQ0=64;MQRankSum=1.730;QD=11.06;ReadPosRankSum=-2.372;VQSLOD=2.7203;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	0/0:60,0:52:99:0,102,1489	1/1:2,6:7:9.03:217,9,0	0/0:30,0:7:14.65:0,15,163	0/0:36,0:14:28.87:0,29,504	0/0:40,0:41:87.20:0,87,1257	1/1:6,13:20:15.05:363,15,0	1/1:13,12:21:18.06:435,18,0	./.	0/0:24,0:24:45.15:0,45,715	0/1:36,0:33:0.03:0,0,925	0/0:28,0:28:39.11:0,39,583	0/0:20,0:20:36.58:0,37,549	0/0:28,0:27:51.13:0,51,734	0/0:26,0:25:48.11:0,48,721	0/0:28,0:28:54.04:0,54,854	0/0:27,0:26:63.19:0,63,967	0/0:39,0:36:66.20:0,66,1030	0/0:33,0:30:72.17:0,72,1083	./.	./.	./.	0/0:15,0:15:33.11:0,33,518	0/0:19,0:16:45.07:0,45,606	0/0:26,0:22:39.10:0,39,564	1/1:4,7:10:12.04:290,12,0	0/0:25,0:24:51.14:0,51,730	./.	0/0:7,0:6:12.04:0,12,194
chr10_random	831987	.	TG	T	834.30	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=3.496;DP=752;FS=0.882;HRun=1;HaplotypeScore=32.2810;InbreedingCoeff=0.7768;MQ=30.09;MQ0=305;MQRankSum=-1.486;QD=8.78;ReadPosRankSum=-1.021;VQSLOD=0.5527;culprit=HRun;set=inputR	GT:AD:DP:GQ:PL	0/0:49,0:31:21.07:0,21,335	0/0:11,0:4:9.03:0,9,143	0/0:20,1:1:3.01:0,3,37	0/0:18,0:1:2.97:0,3,20	0/0:31,0:15:18.06:0,18,284	0/0:31,0:16:15.05:0,15,239	0/0:24,0:13:5.85:0,6,96	./.	0/0:20,0:18:12.04:0,12,191	0/0:31,0:17:51.15:0,51,785	./.	0/0:30,0:20:12.04:0,12,191	0/0:28,0:17:9.03:0,9,133	0/0:47,0:33:27.09:0,27,430	0/0:33,0:25:27.09:0,27,431	0/0:30,0:17:14.87:0,15,239	0/0:38,0:26:42.14:0,42,671	0/0:23,0:17:24.08:0,24,383	1/1:0,10:7:21.07:294,21,0	1/1:1,22:17:12.04:168,12,0	1/1:0,39:25:24.04:313,24,0	0/0:37,0:19:18.06:0,18,287	0/0:22,0:10:12.04:0,12,191	0/0:39,0:25:30.10:0,30,479	0/0:28,0:14:6.02:0,6,96	0/0:28,0:16:48.15:0,48,744	1/1:2,21:15:15.05:209,15,0	0/0:8,0:5:12.04:0,12,192
chr10_random	833120	.	ACAAG	A	92.59	PASS	AC=2;AF=0.045;AN=44;BaseQRankSum=2.744;DP=596;FS=6.095;HRun=0;HaplotypeScore=62.8854;InbreedingCoeff=0.5429;MQ=27.70;MQ0=211;MQRankSum=-2.363;QD=5.79;ReadPosRankSum=2.351;VQSLOD=1.0132;culprit=QD;set=inputR	GT:AD:DP:GQ:PL	0/0:32,0:26:32.92:0,33,757	./.	./.	./.	0/0:22,0:8:6.02:0,6,141	0/0:23,0:15:27.06:0,27,633	0/0:36,0:18:21.07:0,21,508	0/0:19,0:1:3.01:0,3,82	0/0:26,0:21:24.04:0,24,524	0/0:19,0:13:36.11:0,36,883	0/0:19,0:7:9.03:0,9,174	0/0:28,0:19:18.06:0,18,492	0/0:26,0:20:42.13:0,42,1109	0/0:29,0:23:38.98:0,39,918	0/0:31,0:21:30.06:0,30,703	0/0:22,0:19:39.60:0,40,1034	0/0:47,0:35:39.09:0,39,893	0/0:30,0:22:27.09:0,27,739	./.	./.	./.	0/0:13,0:8:12.04:0,12,198	0/0:15,0:7:12.04:0,12,199	0/0:25,0:12:18.06:0,18,400	0/0:12,0:8:12.04:0,12,222	0/0:23,0:16:45.15:0,45,1173	1/1:7,9:4:9.03:174,9,0	0/0:9,0:7:3.01:0,3,45
chr10_random	834350	.	A	AC	298.40	PASS	AB=0.667;AC=7;AF=0.130;AN=54;BaseQRankSum=5.387;DP=539;FS=1.207;HRun=3;HaplotypeScore=55.6621;InbreedingCoeff=0.8344;MQ=55.29;MQ0=6;MQRankSum=-1.817;QD=10.66;ReadPosRankSum=-2.235;VQSLOD=0.6397;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	0/0:40,0:40:93.28:0,93,1116	0/0:6,0:6:12.04:0,12,143	0/0:14,0:9:18.05:0,18,208	0/0:20,0:15:36.08:0,36,408	0/0:24,0:24:63.18:0,63,744	0/0:31,0:31:66.20:0,66,791	0/0:23,0:23:63.15:0,63,740	0/1:1,1:1:0:0,0,0	0/0:14,0:14:30.09:0,30,360	0/0:26,0:26:72.22:0,72,864	0/0:16,0:16:45.14:0,45,540	0/0:25,0:25:48.15:0,48,574	0/0:29,0:29:63.19:0,63,751	0/0:20,0:20:45.12:0,45,527	0/0:21,0:21:51.16:0,51,611	0/0:19,0:19:33.08:0,33,384	0/0:28,0:28:75.21:0,75,887	0/0:22,0:22:60.18:0,60,720	1/1:4,2:2:3.01:42,3,0	./.	1/1:2,11:10:21.07:294,21,0	0/0:23,0:23:51.16:0,51,612	0/0:19,0:19:57.16:0,57,672	0/0:30,0:30:87.25:0,87,1030	0/0:17,0:17:45.14:0,45,540	0/0:20,0:20:60.17:0,60,708	1/1:1,6:2:6.02:84,6,0	0/0:18,0:18:45.14:0,45,540
chr10_random	834734	.	G	GT	549.81	PASS	AB=1.000;AC=7;AF=0.146;AN=48;BaseQRankSum=9.588;DP=463;FS=5.740;HRun=4;HaplotypeScore=91.5196;InbreedingCoeff=0.7243;MQ=61.22;MQ0=14;MQRankSum=-5.635;QD=6.62;ReadPosRankSum=-0.690;VQSLOD=-0.2237;culprit=HaplotypeScore;set=inputR	GT:AD:DP:GQ:PL	0/0:31,0:30:35.82:0,36,705	0/0:5,0:5:11.47:0,11,63	0/1:30,0:9:1.61:2,0,104	0/0:33,0:16:24.63:0,25,256	0/0:25,0:23:37.98:0,38,479	1/1:12,6:16:14.83:289,15,0	1/1:9,5:14:5.85:156,6,0	./.	0/0:18,0:18:27.21:0,27,314	0/0:14,0:12:36.10:0,36,406	0/0:20,0:20:48.65:0,49,532	0/0:14,0:14:15.02:0,15,153	0/0:21,0:21:32.90:0,33,429	0/0:10,0:10:6.51:0,7,216	0/0:25,0:25:42.68:0,43,539	0/0:20,0:20:39.50:0,39,542	0/0:23,0:23:48.85:0,49,535	0/0:28,0:28:52.07:0,52,706	./.	0/0:2,0:1:2.94:0,3,18	./.	0/0:17,0:16:45.13:0,45,506	0/0:19,0:19:22.10:0,22,386	0/0:22,0:22:14.16:0,14,415	1/1:11,7:15:27.60:231,28,0	0/0:23,0:21:50.34:0,50,552	./.	0/0:2,0:2:6.02:0,6,65
chr10_random	836716	.	CGT	C	78.23	PASS	AB=1.000;AC=7;AF=0.146;AN=48;BaseQRankSum=5.491;DP=481;FS=4.290;HRun=0;HaplotypeScore=86.5568;InbreedingCoeff=0.5553;MQ=48.76;MQ0=22;MQRankSum=0.795;QD=1.07;ReadPosRankSum=-0.452;VQSLOD=1.5714;culprit=HaplotypeScore;set=inputR	GT:AD:DP:GQ:PL	0/0:29,0:27:51.13:0,51,707	0/0:3,0:3:6.49:0,6,86	0/0:25,0:11:21.04:0,21,290	0/0:25,0:10:29.92:0,30,382	0/0:7,0:5:9.03:0,9,131	0/1:18,0:17:31.47:36,0,31	1/1:27,3:26:4.79:81,5,0	./.	0/0:31,0:29:54.64:0,55,833	0/0:18,0:18:48.15:0,48,730	0/0:5,0:5:8.73:0,9,136	0/0:24,0:24:1.82:0,2,5	0/0:19,0:19:42.14:0,42,653	0/0:24,0:22:37.99:0,38,658	0/0:18,0:16:48.10:0,48,756	0/0:19,0:18:39.13:0,39,640	0/0:43,1:41:99:0,102,1482	0/0:22,0:20:48.91:0,49,708	./.	./.	1/1:3,1:3:3.01:41,3,0	0/0:11,0:9:21.07:0,21,319	0/0:8,0:8:12.03:0,12,150	0/0:34,1:35:75.13:0,75,1154	1/1:17,0:16:3.32:35,3,0	0/0:24,0:21:61.45:0,61,955	./.	0/0:14,0:10:21.05:0,21,319
chr10_random	836720	.	TGC	T	767.36	PASS	AB=1.000;AC=11;AF=0.229;AN=48;BaseQRankSum=9.275;DP=497;FS=5.979;HRun=0;HaplotypeScore=83.8938;InbreedingCoeff=0.6894;MQ=47.47;MQ0=26;MQRankSum=-3.247;QD=6.98;ReadPosRankSum=-1.158;VQSLOD=2.3068;culprit=HaplotypeScore;set=inputR	GT:AD:DP:GQ:PL	0/0:32,0:30:47.05:0,47,379	0/1:4,0:4:4.03:4,0,36	0/0:19,0:6:8.09:0,8,113	0/0:23,0:8:7.30:0,7,115	0/0:7,0:5:8.84:0,9,59	1/1:19,3:18:33.26:287,33,0	1/1:30,1:27:52.95:405,53,0	./.	0/0:31,0:29:27.87:0,28,462	0/0:19,1:19:40.44:0,40,404	0/0:5,0:5:8.63:0,9,95	1/1:27,0:27:2.40:12,2,0	0/0:19,0:19:41.80:0,42,373	0/0:23,0:21:39.47:0,39,485	0/0:19,0:17:46.33:0,46,425	0/0:18,0:17:38.96:0,39,506	0/0:45,0:42:80.88:0,81,1036	0/0:25,0:23:40.43:0,40,574	./.	./.	1/1:5,0:3:3:26,3,0	0/0:12,0:9:20.33:0,20,154	0/0:10,0:9:9.72:0,10,61	0/0:37,0:37:65.49:0,65,897	1/1:20,1:17:1.12:174,1,0	0/0:24,0:21:38.77:0,39,603	./.	0/0:14,0:10:17.96:0,18,232
chr10_random	836721	.	GCG	G	766.85	PASS	AB=1.000;AC=11;AF=0.229;AN=48;BaseQRankSum=9.287;DP=501;FS=5.987;HRun=0;HaplotypeScore=84.6082;InbreedingCoeff=0.6894;MQ=47.21;MQ0=28;MQRankSum=-2.150;QD=6.79;ReadPosRankSum=-1.135;VQSLOD=2.2760;culprit=HaplotypeScore;set=inputR	GT:AD:DP:GQ:PL	0/0:35,0:32:47.05:0,47,379	0/1:4,0:4:4.03:4,0,36	0/0:18,0:5:8.09:0,8,113	0/0:22,0:7:7.30:0,7,115	0/0:7,0:5:8.84:0,9,59	1/1:22,0:18:33.26:287,33,0	1/1:32,0:28:52.91:405,53,0	./.	0/0:30,0:28:27.87:0,28,462	0/0:20,0:19:40.44:0,40,404	0/0:5,0:5:8.63:0,9,95	1/1:1,26:27:2.40:12,2,0	0/0:19,0:19:41.80:0,42,373	0/0:23,0:21:39.47:0,39,485	0/0:19,0:17:46.33:0,46,425	0/0:18,0:17:38.96:0,39,506	0/0:45,0:42:80.87:0,81,1036	0/0:26,0:24:43.39:0,43,594	./.	./.	1/1:6,0:3:3:26,3,0	0/0:12,0:9:20.33:0,20,154	0/0:10,0:9:9.72:0,10,61	0/0:37,0:37:65.49:0,65,897	1/1:22,0:18:1.12:174,1,0	0/0:24,0:21:38.77:0,39,603	./.	0/0:14,0:10:17.96:0,18,232
chr10_random	836722	.	CGT	C	72.02	PASS	AB=0.982;AC=14;AF=0.368;AN=38;BaseQRankSum=4.982;DP=502;FS=1.114;HRun=0;HaplotypeScore=88.7859;InbreedingCoeff=0.2604;MQ=46.79;MQ0=29;MQRankSum=-1.567;QD=0.39;ReadPosRankSum=0.470;VQSLOD=1.6501;culprit=FS;set=inputR	GT:AD:DP:GQ:PL	0/0:29,5:31:6.02:0,6,86	1/1:3,0:4:2.80:13,3,0	./.	./.	./.	1/1:22,0:18:2.26:43,2,0	1/1:33,0:29:8.36:40,8,0	./.	0/1:30,1:29:16.50:16,0,108	0/0:19,0:18:11.64:0,12,142	0/0:5,0:5:2.71:0,3,39	1/1:26,1:27:2.61:30,3,0	0/0:19,0:19:8.31:0,8,66	0/0:24,0:21:18:0,18,210	0/1:18,0:16:13.01:13,0,57	0/0:19,0:18:18.53:0,19,251	0/0:43,3:42:43.03:0,43,539	0/0:24,3:25:27.86:0,28,378	./.	./.	1/1:6,0:3:2.04:6,2,0	./.	./.	0/0:37,1:37:9.65:0,10,474	0/1:22,0:18:27.60:28,0,40	0/1:23,1:21:11.31:11,0,227	./.	0/0:10,3:9:12.04:0,12,167
chr10_random	837005	.	GT	G	59.86	PASS	AC=2;AF=0.045;AN=44;BaseQRankSum=3.418;DP=621;FS=19.537;HRun=2;HaplotypeScore=76.8849;InbreedingCoeff=0.9652;MQ=51.17;MQ0=49;MQRankSum=-3.052;QD=9.98;ReadPosRankSum=0.173;VQSLOD=0.1469;culprit=HaplotypeScore;set=inputR	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,126,1944	0/0:11,0:10:27.09:0,27,432	./.	./.	0/0:20,0:19:45.15:0,45,713	0/0:23,0:22:63.20:0,63,984	0/0:26,0:26:75.24:0,75,1159	./.	0/0:32,0:32:81.28:0,81,1292	0/0:37,0:33:90.30:0,90,1417	0/0:23,0:22:54.17:0,54,839	0/0:36,0:36:93.31:0,93,1461	0/0:28,0:28:84.27:0,84,1309	0/0:26,0:26:66.22:0,66,1049	0/0:34,0:34:99:0,99,1547	0/0:30,0:30:75.23:0,75,1169	0/0:38,0:38:99:0,105,1678	0/0:28,0:28:69.21:0,69,1076	./.	1/1:0,6:4:12.04:145,12,0	./.	0/0:25,0:25:69.21:0,69,1069	0/0:17,0:17:42.13:0,42,646	0/0:39,0:38:96.31:0,96,1500	0/0:24,0:22:63.20:0,63,972	0/0:22,0:22:66.21:0,66,1030	./.	0/0:8,0:8:24.05:0,24,332
chr10_random	837009	.	T	TCA	135.43	PASS	AC=2;AF=0.045;AN=44;BaseQRankSum=3.407;DP=618;FS=19.753;HRun=0;HaplotypeScore=88.2671;InbreedingCoeff=0.9600;MQ=51.13;MQ0=48;MQRankSum=-3.228;QD=22.57;ReadPosRankSum=0.267;VQSLOD=2.6698;culprit=HaplotypeScore;set=inputR	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,114,1857	0/0:12,0:11:33.09:0,33,507	./.	./.	0/0:19,0:18:42.14:0,42,684	0/0:26,0:25:69.24:0,69,1122	0/0:26,0:26:72.23:0,72,1140	./.	0/0:32,0:32:81.28:0,81,1319	0/0:38,0:34:96.33:0,96,1556	0/0:23,0:22:54.14:0,54,852	0/0:34,0:34:90.29:0,90,1446	0/0:27,0:27:78.27:0,78,1273	0/0:25,0:25:63.21:0,63,1028	0/0:31,0:31:90.29:0,90,1444	0/0:28,0:28:72.24:0,72,1146	0/0:39,0:39:99:0,108,1760	0/0:29,0:29:72.25:0,72,1175	./.	1/1:0,6:4:12.04:220,12,0	./.	0/0:26,0:26:72.25:0,72,1173	0/0:18,0:18:48.15:0,48,774	0/0:40,0:39:99:0,99,1589	0/0:26,0:24:66.18:0,66,1025	0/0:24,0:24:66.23:0,66,1074	./.	0/0:6,0:6:18.06:0,18,294
chr10_random	837018	.	TGGGAG	T	46.23	PASS	AC=2;AF=0.045;AN=44;BaseQRankSum=2.986;DP=631;FS=15.129;HRun=0;HaplotypeScore=129.3687;InbreedingCoeff=0.9342;MQ=51.42;MQ0=44;MQRankSum=-2.834;QD=9.25;ReadPosRankSum=0.450;VQSLOD=2.0387;culprit=QD;set=inputR	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,105,3357	0/0:12,0:11:33.11:0,33,1044	./.	./.	0/0:18,0:17:39.13:0,39,1298	0/0:24,0:23:63.22:0,63,2080	0/0:25,0:25:51.17:0,51,1630	./.	0/0:31,0:31:78.27:0,78,2482	0/0:39,0:36:99:0,108,3411	0/0:23,0:22:48.16:0,48,1597	0/0:36,0:36:96.33:0,96,3162	0/0:28,0:28:84.29:0,84,2773	0/0:31,0:31:81.28:0,81,2562	0/0:32,0:32:90.31:0,90,2994	0/0:29,0:29:74.88:0,75,2416	0/0:41,0:41:99:0,114,3635	0/0:29,0:29:75.26:0,75,2439	./.	1/1:0,5:3:9.03:128,9,0	./.	0/0:27,0:27:72.25:0,72,2272	0/0:21,0:21:57.19:0,57,1760	0/0:40,0:39:96.31:0,96,3002	0/0:26,0:24:63.19:0,63,1860	0/0:27,0:27:78.27:0,78,2457	./.	0/0:7,0:7:21.07:0,21,699
chr10_random	838589	.	TA	T	51.14	PASS	AB=0.647;AC=3;AF=0.060;AN=50;BaseQRankSum=4.035;DP=463;FS=2.325;HRun=12;HaplotypeScore=51.1954;InbreedingCoeff=0.5050;MQ=64.01;MQ0=9;MQRankSum=-4.012;QD=3.41;ReadPosRankSum=0.471;VQSLOD=-0.6594;culprit=HaplotypeScore;set=inputR	GT:AD:DP:GQ:PL	0/0:29,0:30:69.50:0,69,660	0/0:7,0:7:18.04:0,18,183	0/0:13,1:10:13.41:0,13,94	0/0:11,0:7:8.92:0,9,66	0/0:31,1:31:51.85:0,52,682	0/0:25,0:25:57.07:0,57,568	0/0:11,0:11:27.04:0,27,265	0/1:5,6:8:12.16:98,0,12	0/0:11,2:14:9.67:0,10,265	0/0:28,0:29:50.80:0,51,481	0/0:25,2:27:17.09:0,17,345	0/0:12,0:11:18.04:0,18,183	0/0:13,0:13:27.01:0,27,263	0/0:17,0:17:25.45:0,25,323	0/0:19,0:20:47.84:0,48,444	0/0:15,1:17:18.64:0,19,340	0/0:29,0:30:74.03:0,74,692	0/0:21,1:21:27.61:0,28,427	1/1:2,2:3:5.96:46,6,0	./.	./.	0/0:17,0:16:30.06:0,30,304	0/0:14,0:14:36.03:0,36,342	0/0:16,0:16:27.05:0,27,274	0/0:23,0:25:59.94:0,60,582	0/0:27,1:28:42.61:0,43,582	./.	0/0:11,0:11:27.03:0,27,257
chr10_random	840283	.	TTGTG	T	1502.42	PASS	AB=0.722;AC=4;AF=0.100;AN=40;BaseQRankSum=5.477;DP=660;FS=3.173;HRun=0;HaplotypeScore=100.9921;InbreedingCoeff=0.4527;MQ=37.03;MQ0=191;MQRankSum=-1.051;QD=18.10;ReadPosRankSum=-0.220;VQSLOD=3.4362;culprit=HaplotypeScore;set=inputR	GT:AD:DP:GQ:PL	0/0:37,0:32:33.07:0,33,700	0/0:19,0:19:31.62:0,32,410	./.	./.	0/0:20,0:19:38.34:0,38,733	0/1:15,12:17:16.28:451,0,16	0/1:18,10:14:62.52:443,0,63	./.	0/0:30,0:25:48.16:0,48,1110	0/0:29,0:18:44.94:0,45,994	0/0:24,0:19:27.09:0,27,643	0/0:23,0:18:45.15:0,45,1013	0/0:29,0:25:45.15:0,45,1015	0/0:26,0:23:54.18:0,54,1235	0/0:25,0:20:38.87:0,39,814	0/0:37,0:30:54.18:0,54,1293	0/0:32,0:28:60.21:0,60,1433	0/0:17,0:13:26.82:0,27,507	./.	./.	./.	0/0:27,0:21:47.90:0,48,1023	0/0:26,0:23:38.87:0,39,872	0/0:30,0:25:45.15:0,45,1059	1/1:7,19:23:45.15:718,45,0	0/0:40,0:26:62.95:0,63,1346	./.	./.
chr10_random	843344	.	T	TAC	279.75	PASS	AB=0.939;AC=13;AF=0.382;AN=34;BaseQRankSum=5.774;DP=766;FS=3.971;HRun=0;HaplotypeScore=33.9214;InbreedingCoeff=0.3333;MQ=41.63;MQ0=75;MQRankSum=2.231;QD=1.06;ReadPosRankSum=-4.044;VQSLOD=0.1707;culprit=HaplotypeScore;set=inputR	GT:AD:DP:GQ:PL	./.	./.	1/1:24,0:5:3.99:15,4,0	0/1:27,0:11:25.21:25,0,104	0/0:26,0:22:5.92:0,6,79	./.	1/1:53,0:46:0.45:1,0,0	0/1:24,7:24:99:140,0,549	./.	0/0:26,0:21:63.19:0,63,812	0/0:24,0:21:3.01:0,3,39	1/1:33,0:24:0.47:1,0,0	0/1:23,0:19:0:0,0,0	./.	./.	./.	0/0:23,0:22:3.01:0,3,39	./.	0/0:17,0:11:26.60:0,27,286	0/0:22,0:21:0:0,0,0	1/1:41,4:38:9.03:154,9,0	./.	0/0:16,0:13:3.01:0,3,39	./.	./.	0/0:30,0:25:75.24:0,75,985	1/1:26,1:23:3.01:51,3,0	0/0:33,0:31:15.05:0,15,197
chr10_random	843355	.	A	AT	457.52	PASS	AB=0.917;AC=6;AF=0.188;AN=32;BaseQRankSum=6.247;DP=797;FS=15.232;HRun=0;HaplotypeScore=39.7199;InbreedingCoeff=0.3471;MQ=47.19;MQ0=39;MQRankSum=5.273;QD=3.16;ReadPosRankSum=-3.750;VQSLOD=0.4176;culprit=HaplotypeScore;set=inputR	GT:AD:DP:GQ:PL	./.	./.	1/1:21,2:4:9.02:111,9,0	0/1:28,6:19:70.61:434,0,71	0/0:24,0:21:6.02:0,6,84	./.	1/1:58,0:54:0.44:1,0,0	0/0:38,0:34:99:0,99,1381	./.	0/0:30,0:26:75.25:0,75,1049	0/0:22,0:20:3.01:0,3,42	./.	0/0:21,0:19:0:0,0,0	./.	./.	./.	0/0:23,0:23:3.01:0,3,42	./.	0/0:20,0:17:48.13:0,48,635	0/1:29,0:28:0:0,0,0	0/0:49,0:44:9.03:0,9,124	./.	0/0:18,0:15:3.01:0,3,42	./.	./.	0/0:27,0:26:78.26:0,78,1091	0/0:27,0:24:3.01:0,3,41	0/0:32,0:31:15.05:0,15,210
